# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AMPK1_CBM PF16561.5 NODE_35575_length_606_cov_146.054291_g26672_i1reverse_frame_3 - 0.1 12.8 0.1 0.42 10.8 0.0 1.9 2 0 0 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase Snf7 PF03357.21 ORF99922 - 3.6e-18 65.7 12.3 4.3e-18 65.5 12.3 1.0 1 0 0 1 1 1 1 Snf7 Phage_TAC_12 PF12363.8 ORF99922 - 0.0098 16.3 1.2 1 9.8 0.5 2.4 2 1 0 2 2 2 1 Phage tail assembly chaperone protein, TAC DUF357 PF04010.13 ORF99922 - 0.24 11.5 0.9 0.65 10.1 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF357) Prefoldin_2 PF01920.20 ORF99922 - 0.27 11.2 8.9 0.15 12.0 1.0 2.3 2 0 0 2 2 2 0 Prefoldin subunit LMBR1 PF04791.16 ORF99922 - 0.27 10.1 3.9 0.36 9.7 3.9 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Laminin_II PF06009.12 ORF99922 - 0.39 10.7 8.4 2.8 8.0 4.6 2.5 1 1 1 2 2 2 0 Laminin Domain II Thioredoxin PF00085.20 ORF99665 - 8.2e-08 32.2 0.0 1.1e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Na_H_Exchanger PF00999.21 ORF99502 - 7.3e-20 71.1 5.5 9.5e-20 70.7 5.5 1.2 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family MNHE PF01899.16 ORF99502 - 0.032 14.0 6.7 0.072 12.8 2.7 2.1 2 0 0 2 2 2 0 Na+/H+ ion antiporter subunit Ank_2 PF12796.7 ORF98560 - 3.2e-37 127.0 5.3 3.7e-13 49.9 0.7 2.7 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF98560 - 2.7e-29 100.8 1.3 2.8e-09 37.1 0.0 4.2 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF98560 - 2.7e-24 84.5 1.1 2.9e-05 24.3 0.0 5.5 6 0 0 6 6 6 4 Ankyrin repeat Ank_4 PF13637.6 ORF98560 - 2.1e-20 72.8 0.1 2.1e-08 34.5 0.0 3.5 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF98560 - 1.2e-18 65.2 0.0 0.0014 19.0 0.0 4.9 5 0 0 5 5 5 4 Ankyrin repeat DUF3885 PF13021.6 ORF98560 - 0.17 12.0 0.1 8.6 6.6 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3885) Phage_HK97_TLTM PF06120.11 ORF9712 - 0.0048 16.1 2.2 0.0061 15.8 2.2 1.1 1 0 0 1 1 1 1 Tail length tape measure protein Hydrolase_4 PF12146.8 ORF96795 - 2.2e-25 89.3 0.0 2.7e-25 89.1 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF96795 - 1.1e-16 61.3 0.0 1.2e-16 61.1 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold OTU PF02338.19 ORF96505 - 6.3e-17 62.3 0.0 9.2e-17 61.7 0.0 1.3 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF96505 - 0.063 12.7 0.0 0.098 12.1 0.0 1.3 1 0 0 1 1 1 0 Peptidase C65 Otubain p450 PF00067.22 ORF9530 - 6.3e-17 61.5 0.7 1e-16 60.8 0.7 1.3 1 1 0 1 1 1 1 Cytochrome P450 Pkinase PF00069.25 ORF9417 - 7.4e-62 209.1 0.0 8.3e-62 208.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9417 - 5.6e-34 117.6 0.0 6.3e-34 117.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF9417 - 4.9e-05 22.4 0.0 0.00017 20.6 0.0 1.7 1 1 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF9417 - 8.9e-05 21.9 0.0 0.029 13.7 0.0 2.1 2 0 0 2 2 2 2 Kinase-like APH PF01636.23 ORF9417 - 0.003 17.5 0.1 0.0092 15.9 0.1 1.5 1 1 0 2 2 2 1 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF9417 - 0.0072 15.4 0.0 0.012 14.7 0.0 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 Kdo PF06293.14 ORF9417 - 0.018 14.4 0.1 0.041 13.2 0.1 1.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF9417 - 0.043 13.4 0.1 8.5 5.9 0.0 2.1 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 PDZ_3 PF17815.1 ORF92780 - 1.9e-28 99.2 0.0 4.4e-28 98.0 0.0 1.6 1 1 0 1 1 1 1 PDZ domain Ribosomal_S7e PF01251.18 ORF92152 - 1.1e-36 126.3 1.3 1.5e-36 125.9 1.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S7e Na_H_Exchanger PF00999.21 ORF88971 - 7.3e-20 71.1 5.5 9.5e-20 70.7 5.5 1.2 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family MNHE PF01899.16 ORF88971 - 0.032 14.0 6.7 0.072 12.8 2.7 2.1 2 0 0 2 2 2 0 Na+/H+ ion antiporter subunit cNMP_binding PF00027.29 ORF88167 - 1.7e-36 124.1 0.5 6.2e-19 67.9 0.1 2.1 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain WW PF00397.26 ORF85974 - 6.9e-14 51.6 2.2 9.5e-11 41.6 0.0 2.3 2 0 0 2 2 2 2 WW domain Pyrid_oxidase_2 PF13883.6 ORF83982 - 1.2e-28 100.2 0.0 1.3e-28 100.0 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 ORF83982 - 0.028 14.6 0.0 0.042 14.0 0.0 1.4 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase adh_short PF00106.25 ORF83238 - 1.2e-23 83.6 0.4 1.6e-23 83.2 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF83238 - 1.9e-18 66.9 0.4 2.5e-18 66.5 0.4 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF83238 - 0.013 15.5 0.1 0.018 14.9 0.1 1.3 1 0 0 1 1 1 0 KR domain Ham1p_like PF01725.16 ORF83097 - 0.012 15.6 0.7 0.019 14.9 0.7 1.4 1 0 0 1 1 1 0 Ham1 family GATase_2 PF00310.21 ORF83097 - 0.027 13.2 0.1 0.034 12.9 0.1 1.1 1 0 0 1 1 1 0 Glutamine amidotransferases class-II FAD_binding_9 PF08021.11 ORF83097 - 0.034 14.4 0.1 0.059 13.6 0.1 1.4 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain Takusan PF04822.13 ORF83097 - 3.9 7.4 10.5 0.64 9.9 3.7 2.4 1 1 1 2 2 2 0 Takusan LRR_6 PF13516.6 ORF82073 - 1.2 9.4 3.8 17 5.8 0.0 3.8 5 0 0 5 5 5 0 Leucine Rich repeat Aminotran_1_2 PF00155.21 ORF81522 - 1.1e-33 116.9 0.1 1.4e-33 116.6 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF81522 - 0.003 16.6 0.0 0.0038 16.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 ORF81522 - 0.013 14.8 0.0 0.017 14.5 0.0 1.1 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 ORF81522 - 0.13 10.8 0.0 0.23 10.0 0.0 1.6 1 1 0 2 2 2 0 Cys/Met metabolism PLP-dependent enzyme zf-LITAF-like PF10601.9 ORF81463 - 0.11 12.7 3.6 0.15 12.4 3.6 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain cNMP_binding PF00027.29 ORF801 - 9.6e-34 115.3 0.0 9.3e-20 70.5 0.0 2.1 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain PDEase_I PF00233.19 ORF79996 - 1.4e-27 97.0 0.0 2e-27 96.5 0.0 1.3 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase GluR_Homer-bdg PF10606.9 ORF79996 - 0.02 15.1 0.0 0.036 14.2 0.0 1.4 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor rve PF00665.26 ORF78643 - 1.2e-30 106.1 0.0 1.7e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF78643 - 1.4e-20 73.1 1.1 3.5e-20 71.9 1.1 1.7 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF78643 - 3.6e-13 49.1 0.0 8e-13 48.0 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 ORF78643 - 6.9e-09 36.1 0.1 9.5e-09 35.6 0.1 1.1 1 0 0 1 1 1 1 DDE domain DUF480 PF04337.12 ORF78643 - 0.15 12.1 0.1 0.38 10.9 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function, DUF480 DUF3924 PF13062.6 ORF78371 - 0.07 13.1 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3924) DUF1847 PF08901.11 ORF78371 - 0.12 12.1 0.1 0.19 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1847) PCI PF01399.27 ORF76255 - 4.9e-16 59.1 0.1 7.4e-16 58.6 0.1 1.3 1 0 0 1 1 1 1 PCI domain RPN7 PF10602.9 ORF76255 - 8.2e-15 54.9 0.3 1.5e-14 54.0 0.3 1.5 1 0 0 1 1 1 1 26S proteasome subunit RPN7 FeoC PF09012.10 ORF76255 - 0.0043 17.1 0.0 0.0071 16.4 0.0 1.3 1 0 0 1 1 1 1 FeoC like transcriptional regulator Ribosomal_S7e PF01251.18 ORF73254 - 1.1e-36 126.3 1.3 1.5e-36 125.9 1.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S7e BatD PF13584.6 ORF72206 - 0.00044 19.2 0.0 0.00056 18.8 0.0 1.2 1 0 0 1 1 1 1 Oxygen tolerance TMEM154 PF15102.6 ORF72206 - 0.0025 17.7 0.4 0.0043 17.0 0.4 1.4 1 0 0 1 1 1 1 TMEM154 protein family DUF4381 PF14316.6 ORF72206 - 0.016 15.4 0.0 0.025 14.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) DUF3169 PF11368.8 ORF72206 - 0.018 14.5 0.2 0.026 14.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) EMP70 PF02990.16 ORF72206 - 0.032 12.9 0.9 0.035 12.8 0.9 1.1 1 0 0 1 1 1 0 Endomembrane protein 70 EphA2_TM PF14575.6 ORF72206 - 0.035 15.0 0.0 0.056 14.3 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF4448 PF14610.6 ORF72206 - 0.069 12.9 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) DUF2207 PF09972.9 ORF72206 - 0.075 11.8 0.0 0.088 11.6 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) 7TM_GPCR_Srd PF10317.9 ORF72206 - 0.1 11.8 0.2 0.13 11.4 0.2 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd DUF4184 PF13803.6 ORF72206 - 0.12 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4184) Peptidase_C93 PF06035.11 ORF72206 - 0.13 12.0 1.6 0.18 11.6 0.5 1.6 1 1 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP SKG6 PF08693.10 ORF72206 - 0.3 10.6 3.0 0.56 9.7 3.0 1.5 1 0 0 1 1 1 0 Transmembrane alpha-helix domain CactinC_cactus PF09732.9 ORF69569 - 1.1e-58 196.6 7.9 1.3e-58 196.4 7.9 1.1 1 0 0 1 1 1 1 Cactus-binding C-terminus of cactin protein YafQ_toxin PF15738.5 ORF6896 - 0.087 13.2 0.4 0.087 13.2 0.4 2.0 2 2 1 3 3 3 0 Bacterial toxin of type II toxin-antitoxin system, YafQ DYW_deaminase PF14432.6 ORF68571 - 5.4 6.9 10.6 8.3 6.3 4.3 2.4 1 1 0 2 2 2 0 DYW family of nucleic acid deaminases MAT1 PF06391.13 ORF67227 - 6.3e-15 55.6 0.3 7.6e-15 55.3 0.3 1.1 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 Vir_act_alpha_C PF10400.9 ORF67227 - 0.012 16.3 1.6 0.013 16.1 0.6 1.6 2 0 0 2 2 2 0 Virulence activator alpha C-term Metallophos PF00149.28 ORF66284 - 0.0064 17.0 1.0 0.01 16.4 1.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Pterin_4a PF01329.19 ORF65084 - 0.11 12.7 0.1 0.69 10.1 0.0 2.4 1 1 1 2 2 2 0 Pterin 4 alpha carbinolamine dehydratase ssDNA-exonuc_C PF10141.9 ORF65084 - 0.55 9.8 6.1 0.17 11.5 1.9 1.9 1 1 1 2 2 2 0 Single-strand DNA-specific exonuclease, C terminal domain DUF3919 PF13057.6 ORF65084 - 0.58 9.7 14.4 0.49 9.9 4.1 3.1 1 1 3 4 4 4 0 Protein of unknown function (DUF3919) FAM183 PF14886.6 ORF64098 - 9.5e-06 26.3 0.2 6e-05 23.7 0.1 2.0 2 0 0 2 2 2 1 FAM183A and FAM183B related IMUP PF15761.5 ORF64098 - 0.012 16.3 3.1 0.022 15.4 3.1 1.4 1 0 0 1 1 1 0 Immortalisation up-regulated protein DDE_3 PF13358.6 ORF63561 - 4.2e-18 65.5 1.2 5.2e-18 65.2 1.2 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease MbeD_MobD PF04899.12 ORF63255 - 2.9 8.1 8.4 11 6.2 0.5 2.9 3 0 0 3 3 3 0 MbeD/MobD like DHHC PF01529.20 ORF61208 - 0.00093 19.3 1.0 0.0013 18.9 1.0 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase AAT PF03417.16 ORF61046 - 2.7e-23 82.9 0.0 3.2e-23 82.6 0.0 1.0 1 0 0 1 1 1 1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase V-SNARE_C PF12352.8 ORF59890 - 3.7e-13 49.6 0.3 3.7e-13 49.6 0.3 2.4 4 0 0 4 4 4 1 Snare region anchored in the vesicle membrane C-terminus Plasmid_RAQPRD PF09686.10 ORF59890 - 0.0041 17.3 4.0 0.0079 16.4 3.4 1.8 2 0 0 2 2 2 1 Plasmid protein of unknown function (Plasmid_RAQPRD) Peptidase_M35 PF02102.15 ORF59890 - 0.02 13.8 1.1 0.026 13.4 1.1 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family eIF3_subunit PF08597.10 ORF59890 - 0.027 14.4 0.2 0.032 14.1 0.2 1.1 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Mer2 PF09074.10 ORF59890 - 0.04 13.7 0.7 0.047 13.5 0.7 1.2 1 0 0 1 1 1 0 Mer2 YjcZ PF13990.6 ORF59890 - 0.041 13.2 4.7 0.048 13.0 4.4 1.3 1 1 0 1 1 1 0 YjcZ-like protein Syntaxin_2 PF14523.6 ORF59890 - 0.22 11.9 2.8 0.17 12.3 1.0 1.7 2 0 0 2 2 2 0 Syntaxin-like protein HMMR_N PF15905.5 ORF59253 - 0.00025 20.7 17.7 0.00025 20.7 17.7 2.0 1 1 1 2 2 2 1 Hyaluronan mediated motility receptor N-terminal DUF4407 PF14362.6 ORF59253 - 0.00045 19.7 9.1 0.00055 19.4 9.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) DUF3584 PF12128.8 ORF59253 - 0.00064 17.4 13.5 0.0008 17.1 13.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) EzrA PF06160.12 ORF59253 - 0.00074 17.8 19.0 0.00098 17.4 19.0 1.1 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA KMP11 PF03037.16 ORF59253 - 0.0012 19.5 15.7 0.0017 19.1 4.7 3.0 1 1 2 3 3 3 1 Kinetoplastid membrane protein 11 CENP-H PF05837.12 ORF59253 - 0.0015 18.9 10.6 0.0015 18.9 10.6 2.1 1 1 1 2 2 2 1 Centromere protein H (CENP-H) IFT57 PF10498.9 ORF59253 - 0.002 17.2 18.8 0.0076 15.3 18.1 1.9 1 1 1 2 2 2 1 Intra-flagellar transport protein 57 Sec5 PF15469.6 ORF59253 - 0.0032 17.3 8.1 0.0032 17.3 8.1 2.1 1 1 0 2 2 2 1 Exocyst complex component Sec5 PilJ PF13675.6 ORF59253 - 0.0035 17.4 2.1 0.0098 15.9 0.2 2.1 1 1 0 2 2 2 1 Type IV pili methyl-accepting chemotaxis transducer N-term Val_tRNA-synt_C PF10458.9 ORF59253 - 0.0065 16.7 9.8 0.26 11.6 1.0 3.6 2 1 1 3 3 3 1 Valyl tRNA synthetase tRNA binding arm Snapin_Pallidin PF14712.6 ORF59253 - 0.0083 16.5 18.3 0.03 14.8 8.6 2.9 2 1 0 3 3 2 1 Snapin/Pallidin Sigma70_ner PF04546.13 ORF59253 - 0.011 15.7 14.6 0.26 11.1 0.4 2.3 1 1 1 2 2 2 0 Sigma-70, non-essential region PriC PF07445.12 ORF59253 - 0.025 14.5 2.7 0.025 14.5 2.7 2.2 1 1 1 2 2 2 0 Primosomal replication protein priC Trans_reg_C PF00486.28 ORF59253 - 0.026 14.6 2.8 2.4 8.3 0.0 3.2 3 0 0 3 3 3 0 Transcriptional regulatory protein, C terminal KxDL PF10241.9 ORF59253 - 0.028 14.7 16.0 0.25 11.7 2.4 2.9 1 1 2 3 3 3 0 Uncharacterized conserved protein Exonuc_VII_L PF02601.15 ORF59253 - 0.03 13.9 10.8 0.037 13.6 10.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF2935 PF11155.8 ORF59253 - 0.046 14.1 7.6 0.079 13.3 3.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) SlyX PF04102.12 ORF59253 - 0.058 14.0 16.2 0.29 11.8 2.4 3.8 1 1 2 3 3 3 0 SlyX DUF885 PF05960.11 ORF59253 - 0.068 12.8 0.8 0.079 12.6 0.8 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) GCK PF07802.11 ORF59253 - 0.083 13.3 1.0 0.19 12.2 1.0 1.6 1 0 0 1 1 1 0 GCK domain Fez1 PF06818.15 ORF59253 - 0.095 13.1 14.5 0.14 12.6 14.5 1.4 1 0 0 1 1 1 0 Fez1 HBM PF16591.5 ORF59253 - 0.1 12.0 8.1 0.17 11.3 4.2 2.0 1 1 2 3 3 3 0 Helical bimodular sensor domain DUF4416 PF14385.6 ORF59253 - 0.1 12.5 2.7 0.18 11.7 1.6 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4416) TelA PF05816.11 ORF59253 - 0.1 11.6 14.0 0.17 10.9 14.0 1.3 1 1 0 1 1 1 0 Toxic anion resistance protein (TelA) DUF148 PF02520.17 ORF59253 - 0.12 12.5 14.0 0.18 11.9 10.4 2.4 2 1 0 2 2 2 0 Domain of unknown function DUF148 DUF2524 PF10732.9 ORF59253 - 0.12 12.7 12.0 0.17 12.2 8.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2524) Spc7 PF08317.11 ORF59253 - 0.12 11.2 22.1 0.33 9.8 21.8 1.7 1 1 0 1 1 1 0 Spc7 kinetochore protein FapA PF03961.13 ORF59253 - 0.15 10.7 19.5 0.043 12.4 11.6 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A ZnuA PF01297.17 ORF59253 - 0.16 11.4 8.1 0.19 11.1 0.6 2.3 1 1 1 2 2 2 0 Zinc-uptake complex component A periplasmic DUF2703 PF10865.8 ORF59253 - 0.18 12.0 6.8 0.28 11.4 0.9 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF2703) DUF1993 PF09351.10 ORF59253 - 0.18 11.9 1.5 0.28 11.3 1.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) Prominin PF05478.11 ORF59253 - 0.2 9.6 7.7 0.28 9.1 7.7 1.3 1 0 0 1 1 1 0 Prominin Cytochrom_C_2 PF01322.20 ORF59253 - 0.22 12.4 4.2 2.7 8.9 0.8 2.2 2 0 0 2 2 2 0 Cytochrome C' YtxH PF12732.7 ORF59253 - 0.26 11.9 10.4 5.7 7.6 6.7 2.9 1 1 1 2 2 2 0 YtxH-like protein DUF16 PF01519.16 ORF59253 - 0.26 11.8 19.3 0.13 12.7 12.0 2.3 1 1 1 2 2 2 0 Protein of unknown function DUF16 Fib_alpha PF08702.10 ORF59253 - 0.3 11.3 18.4 0.58 10.3 10.2 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TPR_MLP1_2 PF07926.12 ORF59253 - 0.35 10.9 20.8 0.26 11.4 10.5 2.4 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DNA_repr_REX1B PF14966.6 ORF59253 - 0.41 11.3 11.9 4.8 7.9 0.5 3.1 1 1 2 3 3 3 0 DNA repair REX1-B Tho2 PF11262.8 ORF59253 - 0.41 9.8 13.5 0.34 10.1 11.6 1.7 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 DUF1664 PF07889.12 ORF59253 - 0.54 10.3 13.6 0.47 10.5 7.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Hemagglutinin PF00509.18 ORF59253 - 0.63 8.4 8.6 1.2 7.5 7.6 1.8 1 1 1 2 2 2 0 Haemagglutinin Syntaxin_2 PF14523.6 ORF59253 - 0.69 10.3 16.8 3.1 8.2 3.0 2.4 1 1 1 2 2 2 0 Syntaxin-like protein TMF_DNA_bd PF12329.8 ORF59253 - 0.84 9.7 24.9 0.061 13.3 2.8 3.6 1 1 3 4 4 4 0 TATA element modulatory factor 1 DNA binding Occludin_ELL PF07303.13 ORF59253 - 0.87 10.3 16.3 1.3 9.8 4.9 2.4 1 1 2 3 3 3 0 Occludin homology domain TipAS PF07739.13 ORF59253 - 0.88 10.1 5.8 4.5 7.8 5.8 2.1 1 1 0 1 1 1 0 TipAS antibiotic-recognition domain Laminin_II PF06009.12 ORF59253 - 1 9.4 12.5 0.29 11.1 7.1 2.1 1 1 1 2 2 2 0 Laminin Domain II Ribosomal_S20p PF01649.18 ORF59253 - 1.3 9.8 5.2 6 7.6 5.2 2.1 1 1 1 2 2 1 0 Ribosomal protein S20 Z1 PF10593.9 ORF59253 - 1.4 8.4 6.9 1.9 8.0 6.9 1.4 1 0 0 1 1 1 0 Z1 domain DUF1465 PF07323.12 ORF59253 - 1.4 8.8 9.5 0.29 10.9 1.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1465) WDCP PF15390.6 ORF59253 - 1.5 7.2 11.6 1.7 6.9 11.6 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family PIN_8 PF18476.1 ORF59253 - 1.6 8.5 15.3 0.41 10.5 6.1 2.0 1 1 1 2 2 2 0 PIN like domain DUF2205 PF10224.9 ORF59253 - 1.6 8.8 14.2 0.077 13.0 7.3 2.4 2 2 0 2 2 2 0 Short coiled-coil protein OmpH PF03938.14 ORF59253 - 1.6 9.1 18.6 2.5 8.4 6.2 2.2 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) HalX PF08663.10 ORF59253 - 2.1 8.7 7.0 2.2 8.7 2.4 3.0 2 1 0 3 3 2 0 HalX domain P4Ha_N PF08336.11 ORF59253 - 2.2 8.3 14.0 0.11 12.6 4.1 2.8 1 1 2 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Baculo_p24 PF05073.12 ORF59253 - 2.2 8.0 11.7 20 4.9 11.7 2.0 1 1 0 1 1 1 0 Baculovirus P24 capsid protein CSN5_C PF18323.1 ORF59253 - 2.7 8.9 8.5 20 6.2 7.6 2.6 1 1 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain PMC2NT PF08066.12 ORF59253 - 3.1 8.5 11.2 0.23 12.2 2.8 2.5 2 1 1 3 3 2 0 PMC2NT (NUC016) domain ACCA PF03255.14 ORF59253 - 3.3 7.6 13.2 2.1 8.2 3.9 2.5 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PRP1_N PF06424.12 ORF59253 - 3.5 8.0 16.4 9.6 6.6 7.1 2.5 1 1 1 2 2 2 0 PRP1 splicing factor, N-terminal Prefoldin_2 PF01920.20 ORF59253 - 3.6 7.6 22.7 1.7 8.6 4.4 3.3 1 1 2 3 3 3 0 Prefoldin subunit DUF2203 PF09969.9 ORF59253 - 4.4 8.1 11.0 1.2 9.9 4.2 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF948 PF06103.11 ORF59253 - 4.5 7.6 5.7 5.2 7.4 1.7 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF883 PF05957.13 ORF59253 - 5 7.8 5.7 25 5.6 0.9 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF489 PF04356.12 ORF59253 - 5.2 7.0 7.1 9.1 6.2 3.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF489) DUF4404 PF14357.6 ORF59253 - 5.3 7.7 14.2 4.1 8.1 5.7 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) TMPIT PF07851.13 ORF59253 - 5.8 6.1 17.7 4.2 6.5 12.4 2.0 1 1 1 2 2 2 0 TMPIT-like protein DUF2730 PF10805.8 ORF59253 - 5.9 7.0 8.9 3.5 7.8 5.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) GBP_C PF02841.14 ORF59253 - 8.9 5.6 21.2 1.3 8.3 12.2 2.2 1 1 1 2 2 2 0 Guanylate-binding protein, C-terminal domain ECH_2 PF16113.5 ORF59253 - 9.3 5.6 7.4 15 5.0 7.4 1.4 1 1 0 1 1 1 0 Enoyl-CoA hydratase/isomerase MAT1 PF06391.13 ORF58176 - 6.3e-15 55.6 0.3 7.6e-15 55.3 0.3 1.1 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 Vir_act_alpha_C PF10400.9 ORF58176 - 0.012 16.3 1.6 0.013 16.1 0.6 1.6 2 0 0 2 2 2 0 Virulence activator alpha C-term Hemagglutinin PF00509.18 ORF56277 - 0.059 11.8 0.2 0.073 11.5 0.2 1.1 1 0 0 1 1 1 0 Haemagglutinin DUF1664 PF07889.12 ORF55111 - 0.0011 19.0 6.0 0.1 12.6 0.4 3.1 2 1 1 3 3 3 2 Protein of unknown function (DUF1664) Apolipoprotein PF01442.18 ORF55111 - 0.0012 18.7 2.3 1.2 9.0 0.0 2.7 2 1 0 2 2 2 2 Apolipoprotein A1/A4/E domain Vps51 PF08700.11 ORF55111 - 0.0043 17.1 5.5 0.13 12.4 0.5 3.3 2 2 1 3 3 3 1 Vps51/Vps67 Snapin_Pallidin PF14712.6 ORF55111 - 0.023 15.1 3.7 5.8 7.4 0.1 3.3 2 1 0 2 2 2 0 Snapin/Pallidin TPR_MLP1_2 PF07926.12 ORF55111 - 0.062 13.4 7.8 0.071 13.2 1.4 2.4 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein Cob_adeno_trans PF01923.18 ORF55111 - 0.078 13.1 0.7 0.3 11.2 0.3 1.9 1 1 1 2 2 2 0 Cobalamin adenosyltransferase Prefoldin_2 PF01920.20 ORF55111 - 0.082 12.9 11.0 0.66 10.0 2.7 3.1 2 1 0 2 2 2 0 Prefoldin subunit Cep57_CLD_2 PF14197.6 ORF55111 - 0.15 12.2 5.2 2.4 8.3 0.2 2.7 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 CK2S PF15011.6 ORF55111 - 0.18 11.7 3.5 0.21 11.5 0.9 2.3 1 1 2 3 3 3 0 Casein Kinase 2 substrate Fzo_mitofusin PF04799.13 ORF55111 - 0.86 9.1 7.5 1.9 8.0 0.5 2.7 1 1 2 3 3 3 0 fzo-like conserved region Complex1_LYR PF05347.15 ORF55111 - 1.2 9.2 5.4 30 4.7 0.8 4.0 3 1 0 3 3 3 0 Complex 1 protein (LYR family) PDEase_I PF00233.19 ORF54385 - 1.4e-27 97.0 0.0 2e-27 96.5 0.0 1.3 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase GluR_Homer-bdg PF10606.9 ORF54385 - 0.02 15.1 0.0 0.036 14.2 0.0 1.4 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor Octopine_DH PF02317.17 ORF54370 - 0.084 13.0 0.1 0.17 12.0 0.1 1.5 1 0 0 1 1 1 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain MAT1 PF06391.13 ORF53229 - 6.3e-15 55.6 0.3 7.6e-15 55.3 0.3 1.1 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 Vir_act_alpha_C PF10400.9 ORF53229 - 0.012 16.3 1.6 0.013 16.1 0.6 1.6 2 0 0 2 2 2 0 Virulence activator alpha C-term TPR_2 PF07719.17 ORF5311 - 0.00069 19.5 0.3 0.014 15.5 0.3 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF5311 - 0.0087 16.2 1.7 0.35 11.2 0.2 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF5311 - 0.013 15.3 0.6 0.053 13.4 0.7 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat STE PF02200.16 ORF5311 - 0.016 15.6 0.2 0.03 14.8 0.2 1.4 1 0 0 1 1 1 0 STE like transcription factor TPR_12 PF13424.6 ORF5311 - 0.1 12.9 0.0 0.37 11.1 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat Meckelin PF09773.9 ORF52178 - 6.5e-09 34.5 0.0 5.4e-08 31.4 0.0 1.9 1 1 0 1 1 1 1 Meckelin (Transmembrane protein 67) Kinesin PF00225.23 ORF49429 - 6.6e-47 160.0 1.7 7.7e-47 159.8 1.7 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF49429 - 0.0002 21.3 0.9 0.00082 19.3 0.1 2.1 2 0 0 2 2 2 1 Microtubule binding Red1 PF07964.11 ORF49363 - 9 4.4 17.2 9.4 4.3 17.2 1.0 1 0 0 1 1 1 0 Rec10 / Red1 Tetraspanin PF00335.20 ORF44805 - 0.0015 18.2 15.6 0.0034 17.1 15.5 1.5 1 1 0 1 1 1 1 Tetraspanin family TetR_C_2 PF08361.11 ORF44374 - 0.029 14.5 1.4 0.061 13.4 0.1 2.1 2 0 0 2 2 2 0 MAATS-type transcriptional repressor, C-terminal region DUF3091 PF11291.8 ORF44374 - 0.074 13.2 0.3 0.074 13.2 0.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3091) Pro_isomerase PF00160.21 ORF41078 - 4.8e-05 23.7 0.0 8.5e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ETC_C1_NDUFA4 PF04800.12 ORF40689 - 8.2e-16 58.0 1.5 8.2e-16 58.0 1.5 1.8 1 1 1 2 2 2 1 ETC complex I subunit conserved region Luciferase_N PF05295.11 ORF40689 - 0.041 13.9 0.3 0.13 12.3 0.1 1.9 1 1 1 2 2 2 0 Luciferase/LBP N-terminal domain 2-Hacid_dh_C PF02826.19 ORF40467 - 1.4e-47 161.3 0.0 1.6e-47 161.2 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF40467 - 0.0033 17.6 0.0 0.0044 17.2 0.0 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_C PF03720.15 ORF40467 - 0.059 13.8 0.0 0.093 13.2 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain p450 PF00067.22 ORF39316 - 0.013 14.3 0.1 0.026 13.3 0.0 1.5 1 1 1 2 2 2 0 Cytochrome P450 MORN PF02493.20 ORF38037 - 1.1e-50 166.6 41.5 5.2e-08 32.3 0.4 7.1 7 0 0 7 7 7 7 MORN repeat ID PF18543.1 ORF38037 - 3.4 7.8 8.3 39 4.4 0.1 4.8 4 1 1 5 5 5 0 Intracellular delivery domain DUF3048_C PF17479.2 ORF38037 - 6.6 7.2 23.4 9 6.7 3.1 4.3 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain LRR_4 PF12799.7 ORF37611 - 3.5e-21 74.9 27.5 4.2e-08 33.3 4.1 3.8 2 1 2 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF37611 - 2.3e-14 52.9 17.1 4.2e-07 29.6 2.3 3.5 3 1 0 3 3 3 3 Leucine rich repeat LRR_9 PF14580.6 ORF37611 - 2e-07 30.7 4.2 6.7e-05 22.5 0.9 2.1 1 1 1 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 ORF37611 - 6.2e-06 25.8 11.2 0.67 10.2 0.1 4.7 4 0 0 4 4 4 3 Leucine Rich repeat LRR_1 PF00560.33 ORF37611 - 0.00081 19.6 14.9 3.8 8.4 0.1 5.5 4 1 0 4 4 4 2 Leucine Rich Repeat Glycoprotein_B PF00606.18 ORF37611 - 0.0028 17.2 2.2 0.0034 16.8 0.9 1.7 1 1 1 2 2 2 1 Herpesvirus Glycoprotein B ectodomain LRR_3 PF07725.12 ORF37611 - 2.6 8.1 5.3 12 6.0 0.1 3.9 3 1 1 4 4 4 0 Leucine Rich Repeat Histone PF00125.24 ORF36977 - 4e-14 53.1 1.3 4.1e-14 53.0 0.1 1.6 2 0 0 2 2 2 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF36977 - 0.0069 16.6 0.0 0.015 15.5 0.0 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone RP-C PF03428.13 ORF36977 - 0.1 12.3 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Replication protein C N-terminal domain Fringe PF02434.16 ORF361 - 7.1e-24 84.6 0.0 9.1e-24 84.3 0.0 1.1 1 0 0 1 1 1 1 Fringe-like Galactosyl_T PF01762.21 ORF361 - 1.1e-08 35.1 0.0 6.1e-07 29.4 0.0 2.1 1 1 0 1 1 1 1 Galactosyltransferase DUF604 PF04646.12 ORF361 - 0.015 14.7 0.0 0.021 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF604 HAD_SAK_2 PF18143.1 ORF361 - 0.09 13.1 0.0 0.21 11.9 0.0 1.6 1 0 0 1 1 1 0 HAD domain in Swiss Army Knife RNA repair proteins Alg14 PF08660.11 ORF361 - 0.18 11.8 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like DrrA_P4M PF14860.6 ORF3597 - 0.014 15.2 0.3 0.014 15.2 0.3 2.2 3 0 0 3 3 3 0 DrrA phosphatidylinositol 4-phosphate binding domain ODAPH PF15848.5 ORF3597 - 0.083 13.3 0.7 0.13 12.7 0.7 1.4 1 0 0 1 1 1 0 Odontogenesis associated phosphoprotein zf-RING_2 PF13639.6 ORF35392 - 3.8e-07 30.3 9.5 6e-07 29.7 9.5 1.3 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 ORF35392 - 9.6e-06 25.6 6.8 1.8e-05 24.7 6.8 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF35392 - 9.7e-06 25.7 7.6 2.3e-05 24.5 7.6 1.6 1 1 0 1 1 1 1 FANCL C-terminal domain zf-rbx1 PF12678.7 ORF35392 - 1.7e-05 25.0 11.5 4.7e-05 23.6 11.5 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING-like PF08746.11 ORF35392 - 0.0039 17.5 10.8 0.0094 16.2 10.8 1.7 1 1 0 1 1 1 1 RING-like domain RINGv PF12906.7 ORF35392 - 0.0089 16.1 8.6 0.018 15.2 8.6 1.6 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4 PF00097.25 ORF35392 - 0.016 15.1 11.2 0.032 14.1 11.2 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF35392 - 0.04 13.5 9.3 0.094 12.3 9.3 1.6 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF35392 - 0.052 13.4 10.2 0.096 12.6 10.2 1.4 1 0 0 1 1 1 0 PHD-finger C1_1 PF00130.22 ORF35392 - 0.14 12.1 13.6 0.062 13.2 6.5 2.6 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2318 PF10080.9 ORF35392 - 0.14 12.3 4.4 0.16 12.1 2.3 2.1 2 1 0 2 2 2 0 Predicted membrane protein (DUF2318) zf-C3HC4_2 PF13923.6 ORF35392 - 0.16 11.9 13.4 0.53 10.2 13.4 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_9 PF13901.6 ORF35392 - 1 9.3 11.9 3.9 7.4 11.6 2.0 1 1 1 2 2 2 0 Putative zinc-RING and/or ribbon Zn-ribbon_8 PF09723.10 ORF35392 - 1.1 9.4 4.5 3 8.1 4.5 1.7 1 0 0 1 1 1 0 Zinc ribbon domain SCP2 PF02036.17 ORF3462 - 5.1e-20 71.9 0.0 7.4e-20 71.3 0.0 1.2 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF3462 - 0.096 13.0 0.0 0.15 12.4 0.0 1.3 1 0 0 1 1 1 0 Alkyl sulfatase C-terminal TLD PF07534.16 ORF33705 - 4.5e-25 88.5 0.0 5.6e-25 88.2 0.0 1.1 1 0 0 1 1 1 1 TLD DUF1189 PF06691.11 ORF33663 - 0.12 11.9 3.5 0.093 12.3 2.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1189) Pkinase PF00069.25 ORF33173 - 2.5e-45 154.9 0.0 2.8e-45 154.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33173 - 7.9e-26 90.9 0.0 9.5e-26 90.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF33173 - 2.2e-07 30.5 0.0 3.4e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF33173 - 0.00037 19.4 0.0 0.00047 19.1 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF33173 - 0.0018 17.4 0.0 0.0028 16.8 0.0 1.2 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 ORF33173 - 0.014 15.3 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4734 PF15881.5 ORF33001 - 0.084 13.0 0.8 0.19 11.9 0.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4734) MORN PF02493.20 ORF32400 - 1.1e-50 166.6 41.5 5.2e-08 32.3 0.4 7.1 7 0 0 7 7 7 7 MORN repeat ID PF18543.1 ORF32400 - 3.4 7.8 8.3 39 4.4 0.1 4.8 4 1 1 5 5 5 0 Intracellular delivery domain DUF3048_C PF17479.2 ORF32400 - 6.6 7.2 23.4 9 6.7 3.1 4.3 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain AAA_11 PF13086.6 ORF31899 - 0.015 15.1 3.3 0.018 14.9 3.3 1.1 1 0 0 1 1 1 0 AAA domain TBCA PF02970.16 ORF31899 - 0.021 15.2 7.8 0.05 13.9 7.8 1.7 1 1 0 1 1 1 0 Tubulin binding cofactor A EntA_Immun PF08951.10 ORF31899 - 0.074 13.4 0.6 0.13 12.7 0.6 1.4 1 0 0 1 1 1 0 Enterocin A Immunity DUF2204 PF09970.9 ORF31899 - 0.083 12.5 1.1 0.13 11.8 1.0 1.4 1 1 0 1 1 1 0 Nucleotidyl transferase of unknown function (DUF2204) DUF745 PF05335.13 ORF31899 - 0.19 11.5 13.6 0.033 13.9 8.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF745) HSP70 PF00012.20 ORF31899 - 0.24 9.5 5.2 0.31 9.2 5.2 1.1 1 0 0 1 1 1 0 Hsp70 protein ERM PF00769.19 ORF31899 - 0.27 11.0 13.5 0.11 12.2 11.2 1.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Exonuc_VII_L PF02601.15 ORF31899 - 1.3 8.5 10.2 2.4 7.6 10.0 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit Peptidase_M7 PF02031.16 ORF31870 - 0.062 13.4 0.1 0.21 11.7 0.1 1.8 1 1 0 2 2 2 0 Streptomyces extracellular neutral proteinase (M7) family Ribosomal_L4 PF00573.22 ORF31803 - 3e-64 216.3 1.1 3.3e-64 216.1 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Pkinase PF00069.25 ORF29805 - 2.5e-45 154.9 0.0 2.8e-45 154.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29805 - 7.9e-26 90.9 0.0 9.5e-26 90.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF29805 - 2.2e-07 30.5 0.0 3.4e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF29805 - 0.00037 19.4 0.0 0.00047 19.1 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF29805 - 0.0018 17.4 0.0 0.0028 16.8 0.0 1.2 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 ORF29805 - 0.014 15.3 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family TIC20 PF16166.5 ORF26862 - 0.12 12.1 0.8 0.22 11.3 0.8 1.3 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like LMBR1 PF04791.16 ORF26266 - 6.7e-08 31.9 4.6 9.1e-08 31.5 4.6 1.2 1 0 0 1 1 1 1 LMBR1-like membrane protein DENN PF02141.21 ORF24032 - 1.2e-16 61.2 0.1 1.5e-16 60.9 0.1 1.1 1 0 0 1 1 1 1 DENN (AEX-3) domain AGH PF17558.2 ORF24032 - 0.04 14.1 0.0 0.072 13.3 0.0 1.3 1 0 0 1 1 1 0 Androgenic gland hormone PCI PF01399.27 ORF22225 - 4.9e-16 59.1 0.1 7.4e-16 58.6 0.1 1.3 1 0 0 1 1 1 1 PCI domain RPN7 PF10602.9 ORF22225 - 8.2e-15 54.9 0.3 1.5e-14 54.0 0.3 1.5 1 0 0 1 1 1 1 26S proteasome subunit RPN7 FeoC PF09012.10 ORF22225 - 0.0043 17.1 0.0 0.0071 16.4 0.0 1.3 1 0 0 1 1 1 1 FeoC like transcriptional regulator DUF2439 PF10382.9 ORF20797 - 2.9e-05 24.3 0.0 5.2e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2439) BAR_3 PF16746.5 ORF20554 - 0.027 14.2 6.1 0.039 13.6 6.1 1.2 1 0 0 1 1 1 0 BAR domain of APPL family MHC_II_alpha PF00993.20 ORF20554 - 0.11 12.2 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Class II histocompatibility antigen, alpha domain Csm1_N PF18504.1 ORF20554 - 0.43 10.9 12.4 0.67 10.3 5.6 2.9 3 0 0 3 3 3 0 Csm1 N-terminal domain EMC3_TMCO1 PF01956.16 ORF20554 - 0.67 9.7 3.4 1.1 8.9 3.4 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like YabA PF06156.13 ORF20554 - 1.3 9.7 6.1 0.87 10.3 2.9 2.1 2 0 0 2 2 2 0 Initiation control protein YabA Toprim_4 PF13662.6 ORF20309 - 6.1e-25 87.5 0.0 9.5e-25 86.9 0.0 1.3 1 0 0 1 1 1 1 Toprim domain RecR PF02132.15 ORF20309 - 1.1e-15 56.9 1.2 2.3e-15 55.9 1.2 1.6 1 0 0 1 1 1 1 RecR protein Toprim PF01751.22 ORF20309 - 1.3e-11 44.6 0.0 2.2e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Toprim domain FYVE_2 PF02318.16 ORF20309 - 0.045 14.0 0.4 0.23 11.7 0.2 2.0 2 0 0 2 2 2 0 FYVE-type zinc finger HHH PF00633.23 ORF20309 - 0.076 12.9 0.9 0.31 11.0 0.0 2.4 3 0 0 3 3 3 0 Helix-hairpin-helix motif HHH_5 PF14520.6 ORF20309 - 0.13 12.9 0.0 0.67 10.6 0.0 2.1 2 0 0 2 2 2 0 Helix-hairpin-helix domain Toprim_2 PF13155.6 ORF20309 - 0.16 12.5 0.0 0.82 10.1 0.0 1.9 2 0 0 2 2 2 0 Toprim-like DUF2017 PF09438.10 ORF16908 - 0.0013 18.6 0.0 0.0023 17.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2017) Turandot PF07240.11 ORF16908 - 0.15 12.0 0.3 0.44 10.6 0.3 1.8 1 0 0 1 1 1 0 Stress-inducible humoral factor Turandot APS_kinase PF01583.20 ORF16143 - 8.4e-73 243.5 0.0 1.1e-72 243.1 0.0 1.1 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.6 ORF16143 - 8.5e-07 29.2 0.0 1.3e-06 28.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF16143 - 1e-05 26.1 0.0 2.4e-05 24.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain KTI12 PF08433.10 ORF16143 - 0.0021 17.6 0.0 0.0029 17.1 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_29 PF13555.6 ORF16143 - 0.0026 17.5 0.0 0.0052 16.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain CbiA PF01656.23 ORF16143 - 0.0026 17.8 0.0 0.0039 17.2 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 ORF16143 - 0.006 17.0 0.5 0.01 16.2 0.5 1.7 1 1 0 1 1 1 1 AAA ATPase domain ParA PF10609.9 ORF16143 - 0.012 15.1 0.1 0.016 14.7 0.1 1.2 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase SRP54 PF00448.22 ORF16143 - 0.013 15.2 0.0 0.017 14.7 0.0 1.2 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 ORF16143 - 0.026 14.2 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 ORF16143 - 0.037 13.8 0.0 0.074 12.8 0.0 1.6 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family MeaB PF03308.16 ORF16143 - 0.048 12.6 0.0 0.074 12.0 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Torsin PF06309.11 ORF16143 - 0.051 13.7 0.2 0.1 12.7 0.0 1.5 2 0 0 2 2 2 0 Torsin AAA_17 PF13207.6 ORF16143 - 0.071 13.5 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF16143 - 0.086 12.1 0.0 0.15 11.3 0.0 1.5 1 1 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 ORF16143 - 0.092 13.3 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_22 PF13401.6 ORF16143 - 0.11 12.8 0.1 0.2 11.9 0.0 1.5 2 0 0 2 2 1 0 AAA domain ATP_bind_1 PF03029.17 ORF16143 - 0.16 11.7 0.1 0.3 10.8 0.1 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Ploopntkinase1 PF18748.1 ORF16143 - 0.2 11.2 0.0 11 5.4 0.0 2.1 2 0 0 2 2 2 0 P-loop Nucleotide Kinase1 p450 PF00067.22 ORF14635 - 0.013 14.3 0.1 0.026 13.3 0.0 1.5 1 1 1 2 2 2 0 Cytochrome P450 FAD_binding_9 PF08021.11 ORF13722 - 0.097 12.9 0.1 0.17 12.1 0.1 1.4 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain bZIP_1 PF00170.21 ORF13722 - 0.23 11.6 8.0 0.14 12.3 3.2 2.6 1 1 1 2 2 2 0 bZIP transcription factor YqzH PF14164.6 ORF13722 - 0.75 9.9 8.4 0.27 11.3 0.7 2.9 2 1 1 3 3 3 0 YqzH-like protein ABC_tran PF00005.27 ORF13518 - 8e-21 75.0 0.0 1.1e-20 74.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF13518 - 5.9e-07 29.1 0.0 6.1e-05 22.6 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF13518 - 1.2e-05 25.5 0.0 2.5e-05 24.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 ORF13518 - 1.5e-05 25.0 0.0 0.15 11.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF13518 - 0.00013 22.0 0.0 0.00022 21.2 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase NACHT PF05729.12 ORF13518 - 0.00064 19.7 0.1 0.0015 18.5 0.0 1.6 2 0 0 2 2 2 1 NACHT domain AAA_16 PF13191.6 ORF13518 - 0.001 19.5 0.0 0.0016 18.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 ORF13518 - 0.0017 18.8 0.1 0.029 14.8 0.1 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ATP-synt_ab PF00006.25 ORF13518 - 0.0021 17.7 0.0 0.0023 17.6 0.0 1.4 1 1 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_29 PF13555.6 ORF13518 - 0.0033 17.1 0.0 0.006 16.3 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 ORF13518 - 0.0072 16.9 0.0 0.012 16.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF13518 - 0.011 15.4 0.1 0.23 11.1 0.0 2.2 2 1 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 ORF13518 - 0.013 15.7 0.2 0.27 11.5 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit MMR_HSR1 PF01926.23 ORF13518 - 0.014 15.4 0.0 0.016 15.3 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase IstB_IS21 PF01695.17 ORF13518 - 0.029 14.1 0.0 0.65 9.7 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein Rad17 PF03215.15 ORF13518 - 0.032 14.1 0.0 0.057 13.3 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_24 PF13479.6 ORF13518 - 0.045 13.5 0.0 0.068 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF13518 - 0.045 13.8 0.0 0.23 11.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF13518 - 0.069 13.1 0.0 0.19 11.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 ORF13518 - 0.075 12.6 0.1 0.11 12.0 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF13518 - 0.087 13.3 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF13518 - 0.1 13.0 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 RNA helicase ATPase_2 PF01637.18 ORF13518 - 0.11 12.4 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 ORF13518 - 0.11 11.6 0.0 0.34 10.1 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain AAT PF03417.16 ORF11623 - 2.7e-23 82.9 0.0 3.2e-23 82.6 0.0 1.0 1 0 0 1 1 1 1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase EF-hand_6 PF13405.6 ORF111714 - 3.2e-11 42.2 1.7 7e-05 22.4 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF111714 - 5.5e-09 34.9 3.2 0.0014 18.0 0.1 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF111714 - 2.1e-08 34.5 1.5 0.004 17.6 0.5 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF111714 - 1.2e-07 31.5 2.2 0.0034 17.2 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF111714 - 3e-06 26.5 2.4 0.013 14.9 0.6 2.5 2 0 0 2 2 2 2 EF hand Phage_TAC_12 PF12363.8 ORF111365 - 0.016 15.6 0.5 0.033 14.6 0.5 1.6 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Dynamin_M PF01031.20 ORF111365 - 0.022 14.0 0.1 0.03 13.5 0.1 1.2 1 0 0 1 1 1 0 Dynamin central region Flexi_CP_N PF08358.10 ORF111365 - 0.042 13.8 0.0 0.079 13.0 0.0 1.4 1 0 0 1 1 1 0 Carlavirus coat WD40_alt PF14077.6 ORF107681 - 0.052 13.4 0.1 0.14 12.0 0.1 1.7 1 0 0 1 1 1 0 Alternative WD40 repeat motif HTH_WhiA PF02650.14 ORF107681 - 0.14 12.5 6.9 0.11 12.9 2.4 2.7 2 1 0 2 2 2 0 WhiA C-terminal HTH domain PARP PF00644.20 ORF103641 - 2.1e-07 30.7 0.0 3.7e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain RRM_1 PF00076.22 ORF103606 - 1e-06 28.5 0.1 2.3e-06 27.3 0.0 1.7 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF103606 - 0.033 13.8 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PH PF00169.29 ORF103213 - 0.00011 22.7 0.3 0.0051 17.3 0.1 2.3 1 1 1 2 2 2 2 PH domain Oleosin PF01277.17 ORF101515 - 0.7 9.7 6.9 0.31 10.8 4.6 1.6 2 0 0 2 2 2 0 Oleosin Snf7 PF03357.21 ORF100751 - 3.2e-24 85.4 10.4 3.9e-24 85.2 10.4 1.0 1 0 0 1 1 1 1 Snf7 Ist1 PF03398.14 ORF100751 - 0.047 13.6 2.2 0.056 13.4 2.2 1.2 1 0 0 1 1 1 0 Regulator of Vps4 activity in the MVB pathway IMD PF08397.11 ORF100751 - 0.21 10.9 4.9 0.11 11.9 2.1 1.7 1 1 0 1 1 1 0 IRSp53/MIM homology domain Laminin_II PF06009.12 ORF100751 - 1.2 9.2 8.0 1.1 9.2 1.7 2.2 1 1 1 2 2 2 0 Laminin Domain II YlqD PF11068.8 ORF100751 - 2.7 8.4 9.2 5.1 7.5 1.9 2.1 1 1 1 2 2 2 0 YlqD protein Plug PF07715.15 NODE_35980_length_598_cov_4.216696_g28882_i0reverse_frame_1 - 2.1e-05 25.1 0.0 3.7e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain BAR_3 PF16746.5 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.00026 20.8 2.0 0.00026 20.8 2.0 1.5 2 0 0 2 2 2 1 BAR domain of APPL family CENP-H PF05837.12 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.001 19.5 6.6 0.0021 18.4 6.6 1.5 1 0 0 1 1 1 1 Centromere protein H (CENP-H) Ax_dynein_light PF10211.9 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.0028 17.6 8.0 0.0028 17.6 8.0 1.5 2 0 0 2 2 2 1 Axonemal dynein light chain bZIP_1 PF00170.21 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.0042 17.2 4.7 0.0042 17.2 4.7 2.7 2 1 1 3 3 3 1 bZIP transcription factor ZapB PF06005.12 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.016 15.6 6.1 0.016 15.6 6.1 1.9 2 0 0 2 2 2 0 Cell division protein ZapB TMF_TATA_bd PF12325.8 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.017 15.3 4.2 0.017 15.3 4.2 1.7 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF3450 PF11932.8 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.017 14.4 2.1 0.022 14.1 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF5082 PF16888.5 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.021 15.1 6.1 0.021 15.1 6.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) FlaC_arch PF05377.11 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.021 15.2 2.4 0.021 15.2 2.4 2.2 3 0 0 3 3 1 0 Flagella accessory protein C (FlaC) MctB PF11382.8 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.023 14.4 1.1 0.031 14.0 1.1 1.1 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB YabA PF06156.13 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.028 15.0 4.9 0.028 15.0 4.9 1.7 2 0 0 2 2 2 0 Initiation control protein YabA Serine_rich PF08824.10 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.042 13.8 5.4 0.15 12.0 4.4 2.0 1 1 1 2 2 2 0 Serine rich protein interaction domain ERM PF00769.19 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.099 12.4 9.3 0.024 14.4 5.7 1.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family V_ATPase_I PF01496.19 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.12 10.2 2.9 0.13 10.2 2.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family KxDL PF10241.9 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.13 12.6 0.4 0.13 12.6 0.4 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein DivIC PF04977.15 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.13 12.0 12.4 0.035 13.9 7.8 2.3 2 1 1 3 3 2 0 Septum formation initiator EMP24_GP25L PF01105.24 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.21 11.5 5.0 0.34 10.8 4.9 1.4 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD APG6_N PF17675.1 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.32 11.5 11.3 0.55 10.8 11.2 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region Jnk-SapK_ap_N PF09744.9 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.37 11.0 12.3 0.73 10.1 11.5 1.8 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 K-box PF01486.17 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.41 10.9 15.1 0.27 11.4 9.6 2.8 2 1 0 2 2 2 0 K-box region FlxA PF14282.6 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.63 10.1 9.5 0.052 13.5 4.9 1.6 2 0 0 2 2 1 0 FlxA-like protein Phage_GP20 PF06810.11 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.76 9.6 13.0 0.14 12.0 9.3 1.5 2 0 0 2 2 2 0 Phage minor structural protein GP20 SlyX PF04102.12 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 0.9 10.2 3.8 1 10.0 1.9 2.1 2 1 0 2 2 2 0 SlyX Sec34 PF04136.15 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 1.1 9.2 8.9 0.15 11.9 4.4 1.8 2 1 0 2 2 2 0 Sec34-like family TSC22 PF01166.18 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 1.3 9.4 10.4 0.64 10.4 1.4 2.8 1 1 1 2 2 2 0 TSC-22/dip/bun family DUF4140 PF13600.6 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 1.7 9.1 5.2 8.1 7.0 5.1 2.2 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) NEMO PF11577.8 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 2 8.5 10.9 0.26 11.3 5.0 2.2 2 0 0 2 2 2 0 NF-kappa-B essential modulator NEMO DUF1664 PF07889.12 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 2.5 8.1 6.6 6.3 6.9 3.6 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) TMPIT PF07851.13 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 3.4 6.8 9.4 3.2 6.9 7.0 1.8 1 1 1 2 2 2 0 TMPIT-like protein DASH_Dam1 PF08653.10 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 4.7 7.1 5.8 8.8 6.2 0.6 2.7 2 1 1 3 3 3 0 DASH complex subunit Dam1 GrpE PF01025.19 NODE_35979_length_598_cov_71.827709_g28881_i0reverse_frame_1 - 5.4 6.7 12.4 0.58 9.8 8.2 1.5 2 0 0 2 2 2 0 GrpE DUF2613 PF11021.8 NODE_35969_length_598_cov_108.779751_g28871_i0reverse_frame_1 - 0.18 11.9 0.7 0.32 11.1 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) COX2-transmemb PF09125.10 NODE_35969_length_598_cov_108.779751_g28871_i0reverse_frame_1 - 1.6 8.6 6.2 3 7.7 6.2 1.4 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane EKLF_TAD2 PF16833.5 NODE_35881_length_600_cov_96.410619_g28791_i0reverse_frame_1 - 0.039 14.0 0.1 0.077 13.0 0.1 1.4 1 0 0 1 1 1 0 Erythroid krueppel-like transcription factor, transactivation 2 Fer4 PF00037.27 NODE_35881_length_600_cov_96.410619_g28791_i0forward_frame_1 - 0.19 11.6 3.3 0.62 10.0 0.3 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Zip PF02535.22 NODE_35852_length_600_cov_454.846018_g28766_i0forward_frame_1 - 0.16 11.2 0.8 0.17 11.0 0.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter PhzC-PhzF PF02567.16 NODE_35852_length_600_cov_454.846018_g28766_i0forward_frame_1 - 0.38 10.2 3.5 0.47 9.9 3.5 1.1 1 0 0 1 1 1 0 Phenazine biosynthesis-like protein zf-C2H2_11 PF16622.5 NODE_35838_length_601_cov_2.448763_g28755_i0reverse_frame_3 - 0.29 10.9 3.0 1 9.2 3.0 1.9 1 0 0 1 1 1 0 zinc-finger C2H2-type FTA4 PF13093.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.00015 21.7 1.6 0.00021 21.3 1.6 1.3 1 0 0 1 1 1 1 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 Filament PF00038.21 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0008 19.1 2.9 0.0013 18.4 2.9 1.4 1 0 0 1 1 1 1 Intermediate filament protein DUF2362 PF10154.9 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.00081 18.5 0.4 0.00095 18.2 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2362) TPR_MLP1_2 PF07926.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0026 17.8 6.3 0.0053 16.8 6.3 1.5 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein DUF641 PF04859.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0062 16.9 3.4 0.014 15.8 3.4 1.5 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) Tektin PF03148.14 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0077 15.0 2.8 0.0077 15.0 2.8 1.6 2 0 0 2 2 2 1 Tektin family DUF4407 PF14362.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0081 15.5 3.7 0.0082 15.5 3.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Mod_r PF07200.13 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.011 15.9 4.0 0.011 15.9 4.0 2.0 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein GyrB_insert PF18053.1 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.019 14.8 4.4 0.055 13.4 3.9 1.8 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain SKA2 PF16740.5 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.022 14.5 5.8 0.03 14.1 4.5 1.9 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 Exonuc_VII_L PF02601.15 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.023 14.3 1.6 0.024 14.2 1.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_3 PF13758.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.025 14.6 1.1 8.8 6.5 0.6 2.5 1 1 1 2 2 2 0 Prefoldin subunit DUF632 PF04782.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.039 13.3 4.6 0.069 12.5 4.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF632) PKcGMP_CC PF16808.5 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.048 13.5 0.4 0.14 12.0 0.4 1.8 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase UPF0242 PF06785.11 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.052 13.7 4.5 0.077 13.1 4.5 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Tho2 PF11262.8 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.054 12.7 0.9 0.078 12.2 0.9 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Spectrin PF00435.21 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.077 13.5 5.5 0.52 10.8 5.2 2.4 1 1 1 2 2 2 0 Spectrin repeat DUF4795 PF16043.5 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.078 12.6 8.0 0.15 11.7 7.8 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) RasGAP_C PF03836.15 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.099 12.8 5.0 0.12 12.5 3.9 1.7 1 1 0 1 1 1 0 RasGAP C-terminus TMPIT PF07851.13 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.11 11.7 1.2 0.15 11.3 1.2 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF4763 PF15960.5 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.11 11.8 8.1 0.18 11.1 8.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) GAS PF13851.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.15 11.4 9.1 0.098 12.0 6.8 1.9 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Apo-CIII PF05778.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.17 11.5 2.4 1.6 8.5 1.5 2.2 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) Syntaxin-6_N PF09177.11 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.23 12.1 4.2 0.32 11.6 2.6 2.0 2 0 0 2 2 2 0 Syntaxin 6, N-terminal FUSC PF04632.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.23 10.0 2.1 0.25 9.8 1.7 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein family YabA PF06156.13 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.37 11.5 6.5 0.9 10.2 4.0 2.3 1 1 2 3 3 3 0 Initiation control protein YabA Fib_alpha PF08702.10 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.48 10.6 7.3 0.99 9.6 7.3 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family OmpH PF03938.14 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.52 10.7 11.7 0.98 9.8 11.7 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) NPV_P10 PF05531.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.53 10.8 6.9 1.9 9.0 5.7 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein LUC7 PF03194.15 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.54 9.9 7.2 0.28 10.8 4.0 1.9 2 1 0 2 2 2 0 LUC7 N_terminus HAUS6_N PF14661.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.8 9.2 7.9 1.2 8.7 7.8 1.5 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Seryl_tRNA_N PF02403.22 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 1 9.6 10.0 0.14 12.4 5.2 2.0 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Med9 PF07544.13 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 1.8 8.7 8.3 0.52 10.4 4.3 2.1 3 0 0 3 3 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF948 PF06103.11 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 2 8.7 5.0 4.5 7.6 0.9 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) ZapB PF06005.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 5.4 7.5 12.4 0.6 10.6 6.8 2.3 3 0 0 3 3 2 0 Cell division protein ZapB WRW PF10206.9 NODE_35835_length_601_cov_2.998233_g28752_i0reverse_frame_3 - 0.0025 18.2 0.5 0.0054 17.1 0.5 1.5 1 0 0 1 1 1 1 Mitochondrial F1F0-ATP synthase, subunit f RSS_P20 PF11757.8 NODE_35835_length_601_cov_2.998233_g28752_i0forward_frame_2 - 0.014 15.8 1.4 0.029 14.8 1.4 1.5 1 0 0 1 1 1 0 Suppressor of RNA silencing P21-like N-terminal domain Response_reg PF00072.24 NODE_35833_length_601_cov_3.159011_g28750_i0forward_frame_3 - 8.2e-23 80.7 0.3 1e-22 80.4 0.3 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Multi_Drug_Res PF00893.19 NODE_35832_length_601_cov_3.326855_g28749_i0reverse_frame_2 - 2e-26 92.4 11.8 3.5e-26 91.7 11.8 1.4 1 0 0 1 1 1 1 Small Multidrug Resistance protein YhhN PF07947.14 NODE_35832_length_601_cov_3.326855_g28749_i0reverse_frame_2 - 0.0094 15.6 2.9 0.0094 15.6 2.9 1.9 2 0 0 2 2 2 1 YhhN family DnaJ PF00226.31 NODE_35828_length_601_cov_74.180212_g28745_i0forward_frame_2 - 5e-18 65.0 3.0 5e-18 65.0 3.0 1.8 2 0 0 2 2 2 1 DnaJ domain AMMECR1 PF01871.17 NODE_35818_length_601_cov_120.537102_g28735_i0reverse_frame_3 - 1.5e-44 151.6 0.0 1.8e-44 151.3 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 SWIRM PF04433.17 NODE_35802_length_601_cov_504.720848_g28719_i0reverse_frame_3 - 0.076 13.4 0.6 0.17 12.3 0.6 1.5 1 0 0 1 1 1 0 SWIRM domain CP12 PF02672.15 NODE_35801_length_601_cov_617.766784_g28451_i2forward_frame_2 - 0.017 15.9 2.1 0.11 13.3 1.8 2.2 2 0 0 2 2 2 0 CP12 domain DUF948 PF06103.11 NODE_35801_length_601_cov_617.766784_g28451_i2forward_frame_2 - 0.092 13.0 2.5 0.82 10.0 0.1 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) APG6_N PF17675.1 NODE_35801_length_601_cov_617.766784_g28451_i2forward_frame_2 - 0.33 11.5 11.1 0.69 10.4 11.1 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region DivIC PF04977.15 NODE_35801_length_601_cov_617.766784_g28451_i2forward_frame_2 - 0.46 10.3 8.6 0.42 10.4 3.0 2.4 2 0 0 2 2 2 0 Septum formation initiator CENP-H PF05837.12 NODE_35801_length_601_cov_617.766784_g28451_i2forward_frame_2 - 1.7 9.1 13.1 0.17 12.3 5.9 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DUF848 PF05852.11 NODE_35801_length_601_cov_617.766784_g28451_i2forward_frame_2 - 2.6 8.2 8.4 3.7 7.7 5.4 2.4 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) CP12 PF02672.15 NODE_35800_length_601_cov_618.325088_g28451_i1reverse_frame_2 - 0.021 15.6 2.4 0.13 13.0 2.1 2.2 2 0 0 2 2 2 0 CP12 domain DUF948 PF06103.11 NODE_35800_length_601_cov_618.325088_g28451_i1reverse_frame_2 - 0.093 13.0 2.5 0.82 10.0 0.1 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DivIC PF04977.15 NODE_35800_length_601_cov_618.325088_g28451_i1reverse_frame_2 - 0.47 10.3 8.6 0.42 10.4 3.0 2.4 2 0 0 2 2 2 0 Septum formation initiator APG6_N PF17675.1 NODE_35800_length_601_cov_618.325088_g28451_i1reverse_frame_2 - 0.64 10.5 12.2 0.89 10.1 11.1 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region CENP-H PF05837.12 NODE_35800_length_601_cov_618.325088_g28451_i1reverse_frame_2 - 0.74 10.2 11.0 0.12 12.8 4.5 2.3 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DUF848 PF05852.11 NODE_35800_length_601_cov_618.325088_g28451_i1reverse_frame_2 - 3.9 7.6 8.8 0.99 9.5 3.0 2.4 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) Peptidase_M54 PF07998.11 NODE_35788_length_602_cov_2.368607_g28711_i0reverse_frame_3 - 9.4e-07 29.0 2.0 1.3e-06 28.5 1.5 1.5 1 1 0 1 1 1 1 Peptidase family M54 Peptidase_M10 PF00413.24 NODE_35788_length_602_cov_2.368607_g28711_i0reverse_frame_3 - 0.0014 18.5 0.0 0.0016 18.3 0.0 1.2 1 0 0 1 1 1 1 Matrixin Reprolysin_5 PF13688.6 NODE_35788_length_602_cov_2.368607_g28711_i0reverse_frame_3 - 0.002 18.3 0.0 0.0033 17.6 0.0 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 Peptidase_M57 PF12388.8 NODE_35788_length_602_cov_2.368607_g28711_i0reverse_frame_3 - 0.0037 16.9 0.4 0.0037 16.9 0.4 1.6 2 0 0 2 2 2 1 Dual-action HEIGH metallo-peptidase Reprolysin_4 PF13583.6 NODE_35788_length_602_cov_2.368607_g28711_i0reverse_frame_3 - 0.0049 16.5 0.2 0.007 16.0 0.2 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_3 PF13582.6 NODE_35788_length_602_cov_2.368607_g28711_i0reverse_frame_3 - 0.0061 17.1 0.0 0.0092 16.5 0.0 1.4 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.8 NODE_35788_length_602_cov_2.368607_g28711_i0reverse_frame_3 - 0.022 13.4 0.6 0.038 12.6 0.6 1.3 1 0 0 1 1 1 0 Putative peptidase family Reprolysin_2 PF13574.6 NODE_35788_length_602_cov_2.368607_g28711_i0reverse_frame_3 - 0.03 14.2 0.1 0.047 13.6 0.1 1.4 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like EamA PF00892.20 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 1.4e-12 47.9 19.4 2.5e-10 40.7 3.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family Nuc_sug_transp PF04142.15 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 0.0068 15.6 1.3 0.012 14.8 1.3 1.3 1 0 0 1 1 1 1 Nucleotide-sugar transporter FixS PF03597.15 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 0.014 15.1 1.1 0.014 15.1 1.1 4.3 6 0 0 6 6 6 0 Cytochrome oxidase maturation protein cbb3-type DUF2070 PF09843.9 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 0.078 11.3 14.5 0.024 13.0 6.0 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) RseC_MucC PF04246.12 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 6.4 6.7 11.3 1 9.3 2.1 2.8 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Bax1-I PF01027.20 NODE_35784_length_602_cov_3.786596_g28707_i0reverse_frame_2 - 0.31 10.9 3.4 0.39 10.5 0.2 2.1 2 0 0 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 DUF4735 PF15882.5 NODE_35782_length_602_cov_5.037037_g28705_i0reverse_frame_2 - 0.18 11.2 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4735) DUF4190 PF13828.6 NODE_35774_length_602_cov_107.458554_g28698_i0forward_frame_3 - 0.012 15.3 0.5 0.025 14.4 0.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4190) ApoLp-III PF07464.11 NODE_35768_length_602_cov_147.837743_g28693_i0reverse_frame_2 - 0.18 11.9 15.2 0.029 14.5 11.3 1.6 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Pkinase PF00069.25 NODE_35734_length_603_cov_63.806338_g28660_i0forward_frame_2 - 7.3e-20 71.4 0.0 8.9e-20 71.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_35734_length_603_cov_63.806338_g28660_i0forward_frame_2 - 1.9e-05 24.1 0.1 2.9e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2735 PF10931.8 NODE_35734_length_603_cov_63.806338_g28660_i0forward_frame_2 - 0.03 15.0 1.1 0.38 11.5 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2735) SIKE PF05769.11 NODE_35733_length_603_cov_69.332746_g28659_i0reverse_frame_2 - 0.046 13.7 7.4 0.068 13.1 7.4 1.2 1 0 0 1 1 1 0 SIKE family PIN_4 PF13638.6 NODE_35733_length_603_cov_69.332746_g28659_i0reverse_frame_2 - 0.078 13.3 4.2 0.14 12.5 4.2 1.6 1 1 0 1 1 1 0 PIN domain WD40_like PF17005.5 NODE_35731_length_603_cov_73.052817_g28657_i0reverse_frame_2 - 0.074 12.4 0.0 0.15 11.4 0.0 1.5 1 1 0 1 1 1 0 WD40-like domain BRCA2 PF00634.18 NODE_35720_length_603_cov_132.220070_g28647_i0forward_frame_2 - 0.0026 17.4 0.4 0.0067 16.1 0.4 1.7 1 0 0 1 1 1 1 BRCA2 repeat Atg8 PF02991.16 NODE_35696_length_603_cov_2100.265845_g28629_i0forward_frame_3 - 1.3e-36 125.0 0.4 1.8e-36 124.5 0.4 1.2 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 NODE_35696_length_603_cov_2100.265845_g28629_i0forward_frame_3 - 0.00014 22.2 0.1 0.00029 21.2 0.1 1.5 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Abhydrolase_5 PF12695.7 NODE_35696_length_603_cov_2100.265845_g28629_i0forward_frame_3 - 0.11 12.3 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family BTB PF00651.31 ORF99872 - 5.4e-18 65.2 4.9 7.1e-18 64.9 0.7 2.5 1 1 1 2 2 2 1 BTB/POZ domain MA3 PF02847.17 ORF99872 - 0.066 13.2 0.3 0.69 9.9 0.1 2.2 2 0 0 2 2 2 0 MA3 domain DUF4845 PF16137.5 ORF99816 - 0.096 13.6 1.8 0.14 13.1 0.1 2.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4845) GST_C_2 PF13410.6 ORF98681 - 4.8e-07 29.7 2.2 7.2e-07 29.1 2.2 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF98681 - 2.2e-05 25.0 0.0 3.6e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF98681 - 0.0003 21.0 0.0 0.00046 20.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF98681 - 0.00057 20.0 0.0 0.0011 19.1 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF98681 - 0.13 13.0 0.0 0.2 12.4 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain Trans_reg_C PF00486.28 ORF9720 - 1e-18 67.1 0.0 1.9e-18 66.3 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 ORF9720 - 7.4e-17 61.5 0.1 3.3e-16 59.5 0.0 1.9 2 0 0 2 2 2 1 Response regulator receiver domain Methyltransf_21 PF05050.12 ORF95704 - 1.6e-06 28.3 0.0 2.1e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain DUF591 PF04569.14 ORF93968 - 0.5 10.5 0.1 0.5 10.5 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function zf_CCCH_5 PF18384.1 ORF92135 - 0.096 12.8 0.2 0.19 11.9 0.2 1.4 1 0 0 1 1 1 0 Unkempt Zinc finger domain 1 (Znf1) DAGAT PF03982.13 ORF91326 - 1.6e-35 122.5 0.0 1.9e-35 122.3 0.0 1.0 1 0 0 1 1 1 1 Diacylglycerol acyltransferase TEX12 PF15219.6 ORF91326 - 0.17 12.2 0.0 0.31 11.4 0.0 1.4 1 0 0 1 1 1 0 Testis-expressed 12 Med11 PF10280.9 ORF90504 - 0.12 12.8 4.8 0.18 12.3 4.7 1.4 1 1 0 1 1 1 0 Mediator complex protein YlbE PF14003.6 ORF90504 - 0.41 11.1 3.2 15 6.1 0.4 2.4 2 0 0 2 2 2 0 YlbE-like protein CBP4 PF07960.11 ORF90504 - 2.4 8.0 12.2 4.6 7.1 0.3 2.9 2 1 1 3 3 3 0 CBP4 Med11 PF10280.9 ORF90488 - 0.12 12.8 4.8 0.18 12.3 4.7 1.4 1 1 0 1 1 1 0 Mediator complex protein YlbE PF14003.6 ORF90488 - 0.41 11.1 3.2 15 6.1 0.4 2.4 2 0 0 2 2 2 0 YlbE-like protein CBP4 PF07960.11 ORF90488 - 2.5 8.0 12.2 4.6 7.1 0.3 2.8 2 1 1 3 3 3 0 CBP4 PKD PF00801.20 ORF89395 - 0.074 12.9 0.1 0.17 11.8 0.1 1.6 1 0 0 1 1 1 0 PKD domain Cytochrom_NNT PF03264.14 ORF87965 - 1.3e-77 259.4 2.9 1.5e-77 259.2 2.9 1.0 1 0 0 1 1 1 1 NapC/NirT cytochrome c family, N-terminal region Cytochrom_c3_2 PF14537.6 ORF87965 - 5.8e-08 33.1 14.1 0.00085 19.7 1.0 2.1 2 0 0 2 2 2 2 Cytochrome c3 Cytochrome_C7 PF14522.6 ORF87965 - 1.4e-07 31.4 15.6 2.7e-05 24.1 3.7 2.8 2 1 1 3 3 3 3 Cytochrome c7 and related cytochrome c Cytochrom_CIII PF02085.16 ORF87965 - 1.4e-06 28.5 13.4 0.00041 20.6 5.2 2.2 2 0 0 2 2 2 2 Class III cytochrome C family Paired_CXXCH_1 PF09699.10 ORF87965 - 1.6e-06 27.8 10.6 0.21 11.4 4.8 3.7 3 1 0 3 3 3 3 Doubled CXXCH motif (Paired_CXXCH_1) Neuropep_like PF15161.6 ORF87965 - 0.01 15.5 6.3 0.18 11.5 0.1 3.6 4 0 0 4 4 4 0 Neuropeptide-like GF_recep_IV PF14843.6 ORF87965 - 0.013 15.3 2.1 0.013 15.3 2.1 2.3 2 1 0 2 2 2 0 Growth factor receptor domain IV DUF3463 PF11946.8 ORF87965 - 0.12 12.2 5.0 0.4 10.5 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3463) Zn-ribbon_8 PF09723.10 ORF87965 - 1.3 9.3 7.1 21 5.3 0.2 3.5 3 1 1 4 4 4 0 Zinc ribbon domain Cytochrome_C554 PF13435.6 ORF87965 - 1.5 9.8 16.9 7.9 7.5 6.6 3.1 2 2 0 2 2 2 0 Cytochrome c554 and c-prime zf-C4pol PF14260.6 ORF87965 - 2 8.9 10.2 4.6 7.8 0.6 2.8 2 2 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta Cytochrome_P460 PF16694.5 ORF87965 - 3.1 8.2 21.4 3.4 8.0 0.4 4.1 2 2 2 4 4 4 0 Cytochrome P460 DHC PF09626.10 ORF87965 - 6.4 7.7 16.9 1.1 10.1 0.4 3.7 1 1 4 5 5 5 0 Dihaem cytochrome c Spc7 PF08317.11 ORF86295 - 0.00087 18.3 27.5 0.002 17.1 19.8 2.0 1 1 1 2 2 2 2 Spc7 kinetochore protein Gon7 PF08738.10 ORF86295 - 0.015 15.4 0.5 0.015 15.4 0.5 2.7 1 1 1 2 2 2 0 Gon7 family DUF5082 PF16888.5 ORF86295 - 0.026 14.8 30.8 0.057 13.7 6.5 3.5 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) HSCB_C PF07743.13 ORF86295 - 0.034 14.6 1.7 0.034 14.6 1.7 3.1 1 1 2 3 3 3 0 HSCB C-terminal oligomerisation domain DUF4125 PF13526.6 ORF86295 - 0.063 12.9 9.9 0.14 11.7 7.6 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF4125) ApoO PF09769.9 ORF86295 - 0.14 12.1 10.4 0.59 10.1 1.5 2.7 2 1 1 3 3 3 0 Apolipoprotein O Golgin_A5 PF09787.9 ORF86295 - 0.2 11.1 27.6 0.2 11.1 17.7 2.0 1 1 1 2 2 2 0 Golgin subfamily A member 5 DUF4407 PF14362.6 ORF86295 - 0.21 10.9 19.4 6.5 6.0 19.4 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) IFT57 PF10498.9 ORF86295 - 0.28 10.1 29.5 0.5 9.3 13.9 2.1 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 DUF2130 PF09903.9 ORF86295 - 0.32 10.2 25.7 0.088 12.1 9.9 2.6 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2130) Rootletin PF15035.6 ORF86295 - 0.39 10.7 19.4 0.46 10.5 4.3 2.1 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion Laminin_II PF06009.12 ORF86295 - 0.4 10.7 22.3 3.9 7.5 0.2 3.1 1 1 3 4 4 4 0 Laminin Domain II Nup54 PF13874.6 ORF86295 - 0.54 10.4 15.3 0.15 12.1 7.8 2.4 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 Enkurin PF13864.6 ORF86295 - 0.59 10.6 16.8 0.46 11.0 9.2 2.7 1 1 1 2 2 2 0 Calmodulin-binding COG2 PF06148.11 ORF86295 - 0.65 10.1 18.1 2.2 8.4 0.2 3.1 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF883 PF05957.13 ORF86295 - 0.68 10.6 7.1 1.2 9.7 0.8 3.0 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF1664 PF07889.12 ORF86295 - 0.86 9.7 21.0 2.3 8.3 11.3 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) TraG_N PF07916.11 ORF86295 - 1.6 7.5 3.8 1.9 7.3 3.8 1.2 1 0 0 1 1 1 0 TraG-like protein, N-terminal region TMPIT PF07851.13 ORF86295 - 1.7 7.8 24.1 2.8 7.1 8.6 2.2 1 1 1 2 2 2 0 TMPIT-like protein SlyX PF04102.12 ORF86295 - 1.8 9.2 16.3 2 9.1 2.0 3.5 2 2 1 3 3 3 0 SlyX BLOC1_2 PF10046.9 ORF86295 - 2.3 8.5 25.9 0.2 12.0 7.1 3.4 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ALMT PF11744.8 ORF86295 - 2.6 6.8 16.5 3.3 6.4 16.5 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter HIP1_clath_bdg PF16515.5 ORF86295 - 2.8 8.6 24.0 3.6 8.3 8.0 3.1 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Atg14 PF10186.9 ORF86295 - 4.7 6.2 23.9 2.2 7.3 19.4 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 ORF86295 - 5 6.6 20.2 86 2.5 20.2 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit Syntaxin-6_N PF09177.11 ORF86295 - 5.4 7.6 16.9 10 6.8 9.6 2.7 1 1 1 2 2 2 0 Syntaxin 6, N-terminal UPF0242 PF06785.11 ORF86295 - 8.7 6.4 28.4 2.6 8.1 3.7 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Pkinase PF00069.25 ORF83595 - 2.6e-24 86.0 1.0 3.2e-24 85.7 1.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83595 - 5.6e-15 55.3 0.3 7.6e-15 54.9 0.3 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF83595 - 2.7e-07 30.1 0.4 4.5e-07 29.4 0.1 1.5 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF83595 - 7.8e-07 29.3 0.0 0.00069 19.6 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF83595 - 0.00042 20.0 0.1 0.00062 19.4 0.1 1.4 1 0 0 1 1 1 1 RIO1 family DUF1679 PF07914.11 ORF83595 - 0.0095 14.8 0.1 0.014 14.3 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) Peptidase_S74 PF13884.6 ORF80807 - 1.5e-08 34.8 0.0 2.7e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 ORF80807 - 0.038 13.5 0.1 0.13 11.9 0.0 1.8 2 0 0 2 2 2 0 Trimerisation motif Hpt PF01627.23 ORF79800 - 0.13 12.5 1.3 0.2 11.9 1.3 1.3 1 0 0 1 1 1 0 Hpt domain TerB_C PF15615.6 ORF78689 - 0.051 13.9 0.1 0.087 13.1 0.1 1.4 1 0 0 1 1 1 0 TerB-C domain Presenilin PF01080.17 ORF7841 - 2.1 7.0 3.8 2.6 6.7 3.8 1.1 1 0 0 1 1 1 0 Presenilin eIF_4EBP PF05456.11 ORF76920 - 3 7.8 7.8 7.4 6.5 6.2 2.4 2 1 0 2 2 2 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Glutaredoxin2_C PF04399.13 ORF76592 - 3.4e-38 130.4 0.0 4.2e-38 130.1 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin 2, C terminal domain GST_N_3 PF13417.6 ORF76592 - 0.0041 17.5 0.0 0.0099 16.3 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF76592 - 0.035 14.1 0.0 0.073 13.1 0.0 1.6 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Sua5_yciO_yrdC PF01300.18 ORF75282 - 7.2e-29 100.5 0.0 8.4e-29 100.3 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination Cas6b_N PF17955.1 ORF73595 - 0.051 13.7 0.0 0.12 12.5 0.0 1.6 1 0 0 1 1 1 0 Cas6b N-terminal domain Herpes_UL73 PF03554.13 ORF71953 - 0.29 11.2 1.4 0.51 10.4 1.4 1.3 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein MFS_1 PF07690.16 ORF70388 - 9e-17 61.0 22.1 1.1e-16 60.8 22.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF70388 - 0.014 14.3 17.1 0.018 14.0 17.1 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter OATP PF03137.20 ORF70388 - 0.28 9.4 10.3 0.037 12.3 5.9 1.7 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Peptidase_M48_N PF16491.5 ORF70388 - 4 7.3 10.0 0.061 13.2 0.9 2.1 2 1 1 3 3 3 0 CAAX prenyl protease N-terminal, five membrane helices MFS_1 PF07690.16 ORF69032 - 8.7e-15 54.5 0.0 1.1e-14 54.2 0.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF69032 - 2.8e-08 33.1 0.4 3.8e-08 32.6 0.4 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.6 ORF69032 - 0.00022 19.9 0.7 0.00029 19.5 0.5 1.3 1 1 0 1 1 1 1 MFS/sugar transport protein MFS_1_like PF12832.7 ORF69032 - 0.00074 18.5 0.0 0.00087 18.3 0.0 1.2 1 0 0 1 1 1 1 MFS_1 like family SieB PF14163.6 ORF69032 - 0.038 13.5 0.3 7.5 6.0 0.0 2.7 3 0 0 3 3 3 0 Super-infection exclusion protein B DUF1646 PF07854.12 ORF69032 - 0.038 13.3 0.3 0.046 13.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1646) LapA_dom PF06305.11 ORF69032 - 0.25 11.2 1.1 11 5.9 0.1 2.7 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DUF3169 PF11368.8 ORF69032 - 2.5 7.6 5.0 0.39 10.2 1.0 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3169) Hpt PF01627.23 ORF68244 - 0.18 12.1 2.3 0.28 11.5 2.3 1.3 1 0 0 1 1 1 0 Hpt domain Pkinase PF00069.25 ORF67719 - 0.00013 21.4 0.4 0.00028 20.3 0.4 1.6 1 0 0 1 1 1 1 Protein kinase domain Pkinase PF00069.25 ORF66592 - 9e-35 120.3 0.2 1e-34 120.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF66592 - 2.8e-19 69.4 0.1 3.6e-19 69.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF66592 - 0.0016 17.8 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF66592 - 0.011 14.7 0.1 0.013 14.4 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF66592 - 0.038 13.3 0.0 0.05 12.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Pkinase_fungal PF17667.1 ORF66592 - 0.12 11.2 0.1 0.15 10.8 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase DsbC_N PF10411.9 ORF66592 - 0.12 11.9 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 Disulfide bond isomerase protein N-terminus Raptor_N PF14538.6 ORF65866 - 0.0013 18.8 1.0 0.002 18.1 0.7 1.4 1 1 0 1 1 1 1 Raptor N-terminal CASPase like domain ENTH PF01417.20 ORF65264 - 0.00015 21.8 0.0 0.0002 21.4 0.0 1.2 1 0 0 1 1 1 1 ENTH domain Dot_icm_IcmQ PF09475.10 ORF65264 - 0.12 11.8 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Dot/Icm secretion system protein (dot_icm_IcmQ) Pex14_N PF04695.13 ORF63396 - 0.035 14.8 0.2 0.043 14.5 0.2 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Nif11 PF07862.11 ORF63216 - 0.085 13.2 0.2 0.085 13.2 0.2 2.2 2 0 0 2 2 2 0 Nif11 domain Ribosomal_S8e PF01201.22 ORF62297 - 8.6e-44 149.0 1.7 1.1e-43 148.6 1.7 1.2 1 0 0 1 1 1 1 Ribosomal protein S8e Enkurin PF13864.6 ORF62297 - 0.021 15.3 0.6 0.021 15.3 0.6 1.9 2 1 1 3 3 3 0 Calmodulin-binding Hemerythrin PF01814.23 ORF61793 - 5.2e-11 43.3 1.4 9.1e-11 42.5 1.4 1.4 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain SOG2 PF10428.9 ORF58517 - 0.11 11.7 15.7 0.13 11.4 15.7 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein MSA-2c PF12238.8 ORF58517 - 0.28 11.2 12.9 0.38 10.7 12.9 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Lin-8 PF03353.15 ORF58517 - 0.5 9.9 6.5 0.8 9.2 6.5 1.3 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Med3 PF11593.8 ORF58517 - 0.55 9.4 20.1 0.72 9.0 20.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal RAP1 PF07218.11 ORF58517 - 1.4 7.1 12.2 2 6.6 12.2 1.3 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF2981 PF11200.8 ORF58517 - 1.5 8.5 6.1 1.9 8.2 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) Macoilin PF09726.9 ORF58517 - 1.7 7.1 13.1 2.1 6.8 13.1 1.1 1 0 0 1 1 1 0 Macoilin family Presenilin PF01080.17 ORF58517 - 2.2 6.9 6.6 2.7 6.6 6.6 1.1 1 0 0 1 1 1 0 Presenilin PAP1 PF08601.10 ORF58517 - 2.5 7.8 17.9 3.2 7.4 17.9 1.1 1 0 0 1 1 1 0 Transcription factor PAP1 Mucin PF01456.17 ORF58517 - 2.5 8.1 21.4 3.6 7.6 21.4 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein Apt1 PF10351.9 ORF58517 - 3.4 6.4 13.6 4.2 6.1 13.6 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF515 PF04415.12 ORF58517 - 4.9 5.4 17.5 5.8 5.2 17.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Miga PF10265.9 ORF58517 - 6.7 5.6 9.0 8.7 5.2 9.0 1.1 1 0 0 1 1 1 0 Mitoguardin QWRF PF04484.12 ORF58517 - 7.2 6.3 13.9 10 5.7 13.9 1.2 1 0 0 1 1 1 0 QWRF family MAP65_ASE1 PF03999.12 ORF58517 - 8.1 5.0 14.0 10 4.7 14.0 1.1 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Peptidase_S74 PF13884.6 ORF58169 - 1.5e-08 34.8 0.0 2.7e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 ORF58169 - 0.038 13.5 0.1 0.13 11.9 0.0 1.8 2 0 0 2 2 2 0 Trimerisation motif Erythro-docking PF09277.11 ORF57940 - 0.0085 16.0 0.1 0.016 15.1 0.1 1.4 1 0 0 1 1 1 1 Erythronolide synthase, docking EF-hand_6 PF13405.6 ORF56941 - 6.4e-06 25.7 1.0 0.049 13.6 0.0 4.8 4 1 1 5 5 5 1 EF-hand domain EF-hand_7 PF13499.6 ORF56941 - 1.7e-05 25.2 3.9 4.3e-05 23.9 0.8 2.5 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF56941 - 0.00044 19.6 5.2 0.017 14.6 0.0 3.8 5 1 1 6 6 6 2 EF hand p25-alpha PF05517.12 ORF56941 - 0.053 13.7 0.9 0.18 11.9 0.4 1.9 2 0 0 2 2 2 0 p25-alpha zf-ACC PF17848.1 ORF56814 - 7e-08 32.4 0.0 15 5.7 0.0 5.2 5 0 0 5 5 5 0 Acetyl-coA carboxylase zinc finger domain OppC_N PF12911.7 ORF56814 - 5.7e-07 29.4 4.8 4.2 7.4 0.1 5.0 5 0 0 5 5 5 3 N-terminal TM domain of oligopeptide transport permease C AKNA PF12443.8 ORF56814 - 2.7e-06 27.9 0.4 15 6.3 0.0 4.6 5 1 0 5 5 5 0 AT-hook-containing transcription factor BAGE PF08180.11 ORF56814 - 4.2e-05 23.5 3.9 18 5.5 0.1 4.4 4 0 0 4 4 4 0 B melanoma antigen family IncFII_repA PF02387.15 ORF56814 - 5.8e-05 22.5 7.7 3.7 6.7 0.0 4.5 4 1 0 5 5 5 4 IncFII RepA protein family Rtf2 PF04641.12 ORF56814 - 6e-05 22.5 11.1 1.7 7.9 0.1 4.7 1 1 4 5 5 5 5 Rtf2 RING-finger DUF2861 PF11060.8 ORF56814 - 0.00093 18.9 12.5 0.2 11.2 0.9 3.2 1 1 2 3 3 3 2 Protein of unknown function (DUF2861) DUF5562 PF17717.1 ORF56814 - 0.01 15.8 2.8 61 3.5 0.0 4.0 4 0 0 4 4 4 0 Family of unknown function (DUF5562) Nitr_red_assoc PF09655.10 ORF56814 - 0.012 16.2 4.5 91 3.7 0.0 4.7 1 1 4 5 5 5 0 Conserved nitrate reductase-associated protein (Nitr_red_assoc) HCV_NS5a_1a PF08300.13 ORF56814 - 0.017 15.2 6.0 5 7.3 0.1 3.6 4 1 0 4 4 3 0 Hepatitis C virus non-structural 5a zinc finger domain Nuc_H_symport PF03825.16 ORF56814 - 0.023 13.7 5.7 1.8 7.4 0.2 3.1 1 1 1 3 3 3 0 Nucleoside H+ symporter DUF3397 PF11877.8 ORF56814 - 0.075 13.2 0.4 21 5.3 0.0 2.6 2 1 0 3 3 3 0 Protein of unknown function (DUF3397) YjcB PF15940.5 ORF56814 - 0.15 12.3 13.8 1.5 9.1 2.2 2.8 1 1 2 3 3 3 0 Family of unknown function DUF2515 PF10720.9 ORF56814 - 0.21 10.7 1.6 32 3.6 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2515) Acetyltransf_1 PF00583.25 ORF56077 - 4.8e-05 23.6 0.3 7e-05 23.0 0.3 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF56077 - 0.0027 17.6 0.0 0.0041 17.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF1999 PF09390.10 ORF56077 - 0.045 13.4 0.5 0.24 11.1 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1999) DUF1129 PF06570.11 ORF55860 - 0.27 10.7 3.7 0.3 10.6 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) IF4E PF01652.18 ORF54726 - 6.1e-47 159.4 1.1 8.1e-47 159.0 1.1 1.2 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E WDCP PF15390.6 ORF53063 - 0.0021 16.6 0.1 0.0025 16.3 0.1 1.0 1 0 0 1 1 1 1 WD repeat and coiled-coil-containing protein family MIF4G PF02854.19 ORF53063 - 0.04 13.5 0.1 3.5 7.2 0.0 2.1 1 1 1 2 2 2 0 MIF4G domain DUF1394 PF07159.12 ORF53063 - 0.1 11.8 0.8 0.15 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1394) CLU_N PF15044.6 ORF52678 - 0.036 14.4 0.3 0.11 12.8 0.1 1.9 2 0 0 2 2 2 0 Mitochondrial function, CLU-N-term Bud13 PF09736.9 ORF52678 - 0.039 14.4 2.9 0.052 13.9 2.9 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor of RES complex BBS2_N PF14781.6 ORF52678 - 0.12 12.3 1.9 0.18 11.7 1.9 1.3 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Pkinase PF00069.25 ORF52359 - 4.5e-29 101.6 0.1 6.1e-29 101.2 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF52359 - 8.3e-10 38.4 0.0 1.1e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF52359 - 0.042 13.2 0.1 0.057 12.8 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family IpgD PF05925.12 ORF52359 - 0.049 12.2 0.0 0.059 11.9 0.0 1.2 1 0 0 1 1 1 0 Enterobacterial virulence protein IpgD Pkinase_fungal PF17667.1 ORF52359 - 0.08 11.7 0.0 0.099 11.4 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase SOG2 PF10428.9 ORF52251 - 0.11 11.7 15.7 0.13 11.4 15.7 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein MSA-2c PF12238.8 ORF52251 - 0.28 11.2 12.9 0.38 10.7 12.9 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Lin-8 PF03353.15 ORF52251 - 0.5 9.9 6.5 0.8 9.2 6.5 1.3 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Med3 PF11593.8 ORF52251 - 0.55 9.4 20.1 0.72 9.0 20.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal RAP1 PF07218.11 ORF52251 - 1.4 7.1 12.2 2 6.6 12.2 1.3 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF2981 PF11200.8 ORF52251 - 1.5 8.5 6.1 1.9 8.2 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) Macoilin PF09726.9 ORF52251 - 1.7 7.1 13.1 2.1 6.8 13.1 1.1 1 0 0 1 1 1 0 Macoilin family Presenilin PF01080.17 ORF52251 - 2.2 6.9 6.6 2.7 6.6 6.6 1.1 1 0 0 1 1 1 0 Presenilin PAP1 PF08601.10 ORF52251 - 2.5 7.8 17.9 3.2 7.4 17.9 1.1 1 0 0 1 1 1 0 Transcription factor PAP1 Mucin PF01456.17 ORF52251 - 2.5 8.1 21.4 3.6 7.6 21.4 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein Apt1 PF10351.9 ORF52251 - 3.4 6.4 13.6 4.2 6.1 13.6 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF515 PF04415.12 ORF52251 - 4.9 5.4 17.5 5.8 5.2 17.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Miga PF10265.9 ORF52251 - 6.7 5.6 9.0 8.7 5.2 9.0 1.1 1 0 0 1 1 1 0 Mitoguardin QWRF PF04484.12 ORF52251 - 7.2 6.3 13.9 10 5.7 13.9 1.2 1 0 0 1 1 1 0 QWRF family MAP65_ASE1 PF03999.12 ORF52251 - 8.1 5.0 14.0 10 4.7 14.0 1.1 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) CSD PF00313.22 ORF51098 - 2.6e-18 65.6 3.9 5.3e-09 35.8 1.1 3.3 2 2 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF51098 - 4.1e-05 23.2 0.0 0.098 12.4 0.0 2.6 2 0 0 2 2 2 2 Ribonuclease B OB domain TGT PF01702.18 ORF49682 - 5e-57 193.6 0.0 6.3e-57 193.3 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase AAA_26 PF13500.6 ORF49454 - 1.8e-10 41.0 0.0 2.4e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain RNase_E_G PF10150.9 ORF47185 - 2.4 7.5 3.6 9.9 5.5 0.3 2.2 1 1 1 2 2 2 0 Ribonuclease E/G family EcsC PF12787.7 ORF47185 - 3 7.5 9.0 1.8 8.2 5.6 1.9 1 1 1 2 2 2 0 EcsC protein family DDE_3 PF13358.6 ORF47069 - 0.00064 19.5 0.0 0.00093 19.0 0.0 1.3 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_1 PF03184.19 ORF47069 - 0.013 15.1 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease adh_short PF00106.25 ORF46395 - 9.5e-22 77.4 0.0 1.1e-21 77.2 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF46395 - 9e-12 45.0 0.0 1.1e-11 44.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase 3HCDH_N PF02737.18 ORF46395 - 0.001 19.0 0.1 0.0016 18.3 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 ORF46395 - 0.0017 17.9 0.0 0.0022 17.6 0.0 1.1 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF46395 - 0.044 13.8 0.2 0.072 13.1 0.2 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 ORF46395 - 0.06 13.0 0.0 0.09 12.4 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 ORF46395 - 0.062 13.5 0.0 0.099 12.8 0.0 1.4 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase KR PF08659.10 ORF46395 - 0.064 13.2 0.1 0.15 12.0 0.0 1.7 2 0 0 2 2 2 0 KR domain GDP_Man_Dehyd PF16363.5 ORF46395 - 0.13 11.7 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 ORF46395 - 0.17 11.0 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain 2-Hacid_dh_C PF02826.19 ORF46395 - 0.21 10.9 0.3 0.75 9.1 0.0 1.8 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MatE PF01554.18 ORF46141 - 1.2e-20 73.8 2.9 1.4e-20 73.6 2.9 1.0 1 0 0 1 1 1 1 MatE SOAR PF16533.5 ORF45488 - 0.02 14.8 1.1 0.054 13.5 1.0 1.8 1 1 0 1 1 1 0 STIM1 Orai1-activating region DUF4407 PF14362.6 ORF45488 - 0.051 12.9 2.5 0.036 13.4 1.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SKA2 PF16740.5 ORF45488 - 0.088 12.6 0.1 0.088 12.6 0.1 2.8 2 1 1 3 3 3 0 Spindle and kinetochore-associated protein 2 Uds1 PF15456.6 ORF45488 - 0.43 10.8 8.9 0.68 10.1 2.4 2.6 2 2 0 2 2 2 0 Up-regulated During Septation DUF1664 PF07889.12 ORF45488 - 0.51 10.4 2.2 7.5 6.6 0.4 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) ADK PF00406.22 ORF43407 - 6.7e-46 156.1 0.1 8.1e-46 155.9 0.1 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF43407 - 1.9e-35 122.2 0.3 2.5e-35 121.8 0.3 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF43407 - 2.2e-09 38.0 0.1 3.1e-09 37.5 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF43407 - 1.9e-08 34.6 0.0 2.4e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF43407 - 2e-05 24.4 0.5 0.092 12.4 0.1 2.1 2 0 0 2 2 2 2 Thymidylate kinase AAA_19 PF13245.6 ORF43407 - 0.023 15.0 0.1 0.036 14.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF43407 - 0.062 12.6 0.0 0.093 12.0 0.0 1.4 1 1 0 1 1 1 0 Zeta toxin NTPase_1 PF03266.15 ORF43407 - 0.1 12.5 0.2 0.3 11.0 0.1 1.8 1 1 1 2 2 2 0 NTPase IF2_N PF04760.15 ORF4099 - 0.039 13.8 0.3 0.12 12.2 0.0 1.9 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region rve PF00665.26 ORF4054 - 2.1e-28 98.9 0.0 2.9e-28 98.4 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF4054 - 6.7e-21 74.2 1.1 1.5e-20 73.1 1.1 1.7 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF4054 - 2.9e-15 55.8 0.0 5.9e-15 54.8 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 ORF4054 - 7.2e-06 26.3 0.1 1e-05 25.8 0.1 1.2 1 0 0 1 1 1 1 DDE domain GerE PF00196.19 ORF40211 - 1.1e-21 76.2 1.3 1.6e-21 75.6 1.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 ORF40211 - 8.8e-09 34.9 0.2 1.7e-08 34.0 0.2 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 ORF40211 - 1.9e-06 27.3 0.4 4.1e-06 26.2 0.4 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 ORF40211 - 1.7e-05 24.5 0.6 4.7e-05 23.1 0.2 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF40211 - 0.00011 21.8 0.0 0.00043 20.0 0.1 2.0 1 1 1 2 2 2 1 Homeodomain-like domain HTH_24 PF13412.6 ORF40211 - 0.0002 20.9 0.2 0.00036 20.0 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 ORF40211 - 0.0016 18.2 0.2 0.018 14.8 0.2 2.2 1 1 0 1 1 1 1 LexA DNA binding domain HTH_11 PF08279.12 ORF40211 - 0.0017 18.2 0.8 0.017 15.1 0.2 2.3 2 0 0 2 2 2 1 HTH domain DUF2089 PF09862.9 ORF40211 - 0.0047 16.9 0.0 0.0086 16.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2089) HTH_28 PF13518.6 ORF40211 - 0.013 15.6 0.0 0.028 14.5 0.0 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_7 PF02796.15 ORF40211 - 0.016 15.3 0.0 0.032 14.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_5 PF01022.20 ORF40211 - 0.018 14.9 0.0 0.029 14.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Sigma70_ECF PF07638.11 ORF40211 - 0.031 14.2 0.1 0.055 13.4 0.1 1.5 1 1 0 1 1 1 0 ECF sigma factor HTH_20 PF12840.7 ORF40211 - 0.04 14.0 0.2 0.069 13.2 0.2 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 ORF40211 - 0.077 12.8 0.0 0.21 11.4 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain NUMOD1 PF07453.13 ORF40211 - 0.18 12.1 0.1 1.4 9.2 0.0 2.2 2 0 0 2 2 2 0 NUMOD1 domain Acetyltransf_1 PF00583.25 ORF38352 - 0.027 14.7 0.5 0.77 10.0 0.1 2.4 2 1 0 2 2 2 0 Acetyltransferase (GNAT) family FR47 PF08445.10 ORF38352 - 0.085 12.8 0.0 16 5.6 0.0 2.4 2 0 0 2 2 2 0 FR47-like protein Peptidase_S74 PF13884.6 ORF36974 - 1.5e-08 34.8 0.0 2.7e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 ORF36974 - 0.034 13.7 0.0 0.11 12.0 0.0 1.8 2 0 0 2 2 2 0 Trimerisation motif Myelin_PLP PF01275.19 ORF36542 - 0.022 14.6 0.6 0.022 14.6 0.6 2.0 2 0 0 2 2 2 0 Myelin proteolipid protein (PLP or lipophilin) Tmemb_9 PF05434.11 ORF36542 - 0.039 13.9 0.0 0.072 13.0 0.0 1.4 1 0 0 1 1 1 0 TMEM9 SLC3A2_N PF16028.5 ORF36542 - 0.04 13.5 1.9 0.16 11.6 1.3 2.1 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus Gpr1_Fun34_YaaH PF01184.19 ORF36542 - 0.04 13.5 7.2 0.065 12.8 7.2 1.3 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family SARAF PF06682.12 ORF36542 - 0.046 13.4 0.0 0.062 12.9 0.0 1.2 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis WBP-1 PF11669.8 ORF36542 - 0.053 14.1 0.2 0.097 13.3 0.2 1.4 1 0 0 1 1 1 0 WW domain-binding protein 1 Ly49 PF08391.10 ORF36542 - 0.14 12.5 4.0 0.43 11.0 0.6 2.3 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region DUF4834 PF16118.5 ORF36542 - 0.16 12.9 0.1 0.16 12.9 0.1 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) ATG27 PF09451.10 ORF36542 - 0.17 11.7 0.9 0.9 9.3 0.1 2.0 2 0 0 2 2 2 0 Autophagy-related protein 27 Herpes_LMP2 PF07415.11 ORF36542 - 1.1 8.0 7.3 1.5 7.5 7.3 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein DUF2070 PF09843.9 ORF36542 - 1.7 6.9 5.7 2.2 6.5 5.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Sigma_reg_N PF13800.6 ORF36542 - 2 8.8 7.3 0.37 11.1 1.0 2.4 3 0 0 3 3 3 0 Sigma factor regulator N-terminal Vpu PF00558.19 ORF36542 - 9.3 6.1 9.7 0.19 11.5 1.2 2.4 2 1 1 3 3 3 0 Vpu protein ICL PF00463.21 ORF36017 - 4.1e-76 256.6 0.3 4.6e-76 256.4 0.3 1.0 1 0 0 1 1 1 1 Isocitrate lyase family PEP_mutase PF13714.6 ORF36017 - 1.8e-07 30.9 0.0 2.2e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase Fic PF02661.18 ORF33626 - 1.3e-14 54.8 0.1 2.6e-14 53.8 0.1 1.4 1 0 0 1 1 1 1 Fic/DOC family SH3_1 PF00018.28 ORF32014 - 0.052 13.2 0.2 0.13 11.9 0.2 1.6 1 0 0 1 1 1 0 SH3 domain TerB_C PF15615.6 ORF31421 - 0.059 13.7 0.1 0.087 13.1 0.1 1.2 1 0 0 1 1 1 0 TerB-C domain Pro_isomerase PF00160.21 ORF31013 - 3.6e-47 160.6 0.2 4.1e-47 160.4 0.2 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks100.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks100.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks100.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks100.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:48:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF417 PF04224.12 ORF28814 - 2e-80 268.4 0.1 2.3e-80 268.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF417 DoxX PF07681.12 ORF28814 - 0.031 14.9 6.6 0.043 14.4 1.7 2.6 1 1 1 2 2 2 0 DoxX TMEM72 PF16054.5 ORF28814 - 0.039 13.6 0.1 0.069 12.9 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein family 72 Vwaint PF14624.6 ORF28341 - 5.9e-23 80.8 0.0 1e-22 80.0 0.0 1.5 1 0 0 1 1 1 1 VWA / Hh protein intein-like UBA PF00627.31 ORF28341 - 9.8e-07 28.6 0.3 2e-06 27.6 0.3 1.6 1 0 0 1 1 1 1 UBA/TS-N domain RuvA_C PF07499.13 ORF28341 - 0.00072 20.0 0.1 0.0019 18.6 0.1 1.7 1 0 0 1 1 1 1 RuvA, C-terminal domain DUF4116 PF13475.6 ORF27882 - 8.4e-31 105.5 0.0 1.3e-12 47.3 0.0 3.2 3 0 0 3 3 3 3 Domain of unknown function (DUF4116) DUF1757 PF08560.10 ORF27882 - 0.19 11.8 0.4 1.2 9.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1757) Antimicrobial19 PF08225.11 ORF27068 - 0.058 13.0 0.7 0.84 9.3 0.1 2.2 2 0 0 2 2 2 0 Pseudin antimicrobial peptide Pkinase PF00069.25 ORF26409 - 9e-35 120.3 0.2 1e-34 120.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF26409 - 2.8e-19 69.4 0.1 3.6e-19 69.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF26409 - 0.0016 17.8 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF26409 - 0.011 14.7 0.1 0.013 14.4 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF26409 - 0.038 13.3 0.0 0.05 12.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Pkinase_fungal PF17667.1 ORF26409 - 0.12 11.2 0.1 0.15 10.8 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase DsbC_N PF10411.9 ORF26409 - 0.12 11.9 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 Disulfide bond isomerase protein N-terminus Toxin_23 PF08093.11 ORF2639 - 0.68 10.1 8.6 3.9 7.7 0.4 3.4 3 0 0 3 3 3 0 Magi 5 toxic peptide family Med11 PF10280.9 ORF2406 - 0.12 12.8 4.8 0.18 12.3 4.7 1.4 1 1 0 1 1 1 0 Mediator complex protein YlbE PF14003.6 ORF2406 - 0.41 11.1 3.2 15 6.1 0.4 2.4 2 0 0 2 2 2 0 YlbE-like protein CBP4 PF07960.11 ORF2406 - 2.5 8.0 12.2 4.6 7.1 0.3 2.8 2 1 1 3 3 3 0 CBP4 Coatomer_b_Cpla PF14806.6 ORF22636 - 1.2e-41 141.7 0.0 1.7e-41 141.2 0.0 1.2 1 0 0 1 1 1 1 Coatomer beta subunit appendage platform Coatamer_beta_C PF07718.12 ORF22636 - 1.1e-16 61.0 2.1 1.8e-16 60.3 0.4 2.1 2 1 0 2 2 2 1 Coatomer beta C-terminal region B2-adapt-app_C PF09066.10 ORF22636 - 0.0019 18.3 0.0 0.0033 17.5 0.0 1.4 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain gpW PF02831.15 ORF22636 - 0.027 14.4 0.1 0.053 13.4 0.1 1.4 1 0 0 1 1 1 0 gpW AP4E_app_platf PF14807.6 ORF22636 - 0.033 14.5 0.2 0.055 13.8 0.2 1.5 1 1 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform Coatomer_g_Cpla PF16381.5 ORF22636 - 0.059 13.5 0.0 0.095 12.8 0.0 1.4 1 0 0 1 1 1 0 Coatomer subunit gamma-1 C-terminal appendage platform EF-hand_6 PF13405.6 ORF22634 - 2.9e-13 48.6 6.8 4.7e-05 23.0 1.7 3.9 3 1 1 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF22634 - 2.8e-11 43.7 3.0 0.00013 22.4 0.3 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF22634 - 7.9e-11 40.7 8.8 0.00049 19.5 0.3 3.5 3 0 0 3 3 3 3 EF hand EF-hand_5 PF13202.6 ORF22634 - 7.3e-06 25.3 9.3 0.0021 17.5 1.9 3.3 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF22634 - 1.3e-05 24.9 5.6 0.0089 15.9 0.3 3.4 2 1 1 3 3 3 3 EF-hand domain pair Histone_HNS PF00816.21 ORF22634 - 0.00087 20.1 0.2 0.93 10.4 0.1 2.2 2 0 0 2 2 2 2 H-NS histone family SPARC_Ca_bdg PF10591.9 ORF22634 - 0.0019 18.5 1.5 0.022 15.1 0.0 2.6 2 1 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region Imm6 PF14434.6 ORF22634 - 0.0033 17.3 1.0 0.8 9.7 0.3 2.5 1 1 1 2 2 2 2 Immunity protein Imm6 EF-hand_9 PF14658.6 ORF22634 - 0.0087 16.4 0.0 1.8 8.9 0.0 2.5 2 0 0 2 2 2 1 EF-hand domain Ras PF00071.22 ORF21588 - 2.1e-47 160.7 0.4 2.5e-47 160.5 0.4 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF21588 - 1.1e-29 103.0 0.8 1.7e-29 102.5 0.8 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF21588 - 8.7e-17 61.1 0.1 1.1e-16 60.8 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF21588 - 7.6e-09 35.3 0.2 9.5e-09 34.9 0.2 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF21588 - 4.2e-08 33.3 0.1 7e-08 32.6 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF21588 - 3.6e-05 23.4 0.2 8.1e-05 22.2 0.2 1.6 1 1 0 1 1 1 1 Ferrous iron transport protein B SRPRB PF09439.10 ORF21588 - 0.00021 20.8 0.0 0.00039 19.9 0.0 1.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AIG1 PF04548.16 ORF21588 - 0.00032 20.1 0.0 0.00053 19.4 0.0 1.4 1 0 0 1 1 1 1 AIG1 family RsgA_GTPase PF03193.16 ORF21588 - 0.00069 19.6 0.0 0.039 13.9 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_7 PF12775.7 ORF21588 - 0.0008 19.0 0.0 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region GTP_EFTU PF00009.27 ORF21588 - 0.0013 18.3 0.2 0.0053 16.3 0.0 1.8 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain DUF1679 PF07914.11 ORF21588 - 0.014 14.3 0.1 0.018 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) AAA_22 PF13401.6 ORF21588 - 0.029 14.6 0.0 0.045 14.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 ORF21588 - 0.032 13.6 0.0 0.046 13.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein Septin PF00735.18 ORF21588 - 0.032 13.5 0.1 0.054 12.8 0.1 1.4 1 0 0 1 1 1 0 Septin ABC_tran PF00005.27 ORF21588 - 0.056 14.0 0.0 0.074 13.6 0.0 1.3 1 0 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 ORF21588 - 0.069 13.5 0.0 0.09 13.2 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 ORF21588 - 0.085 13.3 0.4 2 8.8 0.0 2.3 2 0 0 2 2 2 0 RNA helicase PduV-EutP PF10662.9 ORF21588 - 0.11 12.2 0.0 0.38 10.5 0.0 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_5 PF07728.14 ORF21588 - 0.12 12.3 0.0 0.51 10.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.17 ORF21588 - 0.13 12.0 0.9 0.46 10.2 0.2 1.9 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein MCM PF00493.23 ORF21588 - 0.14 11.2 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 MCM P-loop domain DUF3074 PF11274.8 ORF20903 - 0.061 13.3 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3074) START PF01852.19 ORF20903 - 0.094 12.1 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 START domain DUF1168 PF06658.12 ORF20804 - 1.4e-19 70.2 15.7 5.7e-19 68.3 15.7 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1168) YPEB PF14620.6 ORF20804 - 0.007 15.8 6.9 0.0089 15.4 6.9 1.1 1 0 0 1 1 1 1 YpeB sporulation Dermcidin PF15291.6 ORF20804 - 2 9.0 8.8 1.6 9.3 6.8 1.9 1 1 0 1 1 1 0 Dermcidin, antibiotic peptide Hid1 PF12722.7 ORF20804 - 2.7 6.0 6.1 3.4 5.7 6.1 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein zf_CCCH_5 PF18384.1 ORF1868 - 0.096 12.8 0.2 0.19 11.9 0.2 1.4 1 0 0 1 1 1 0 Unkempt Zinc finger domain 1 (Znf1) adh_short PF00106.25 ORF1741 - 9.5e-22 77.4 0.0 1.1e-21 77.2 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF1741 - 9e-12 45.0 0.0 1.1e-11 44.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase 3HCDH_N PF02737.18 ORF1741 - 0.001 19.0 0.1 0.0016 18.3 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 ORF1741 - 0.0017 17.9 0.0 0.0022 17.6 0.0 1.1 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF1741 - 0.044 13.8 0.2 0.072 13.1 0.2 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 ORF1741 - 0.06 13.0 0.0 0.09 12.4 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 ORF1741 - 0.062 13.5 0.0 0.099 12.8 0.0 1.4 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase KR PF08659.10 ORF1741 - 0.064 13.2 0.1 0.15 12.0 0.0 1.7 2 0 0 2 2 2 0 KR domain GDP_Man_Dehyd PF16363.5 ORF1741 - 0.13 11.7 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 ORF1741 - 0.17 11.0 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain 2-Hacid_dh_C PF02826.19 ORF1741 - 0.21 10.9 0.3 0.75 9.1 0.0 1.8 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pkinase PF00069.25 ORF17203 - 9e-35 120.3 0.2 1e-34 120.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF17203 - 2.8e-19 69.4 0.1 3.6e-19 69.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF17203 - 0.0016 17.8 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF17203 - 0.011 14.7 0.1 0.013 14.4 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF17203 - 0.038 13.3 0.0 0.05 12.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Pkinase_fungal PF17667.1 ORF17203 - 0.12 11.2 0.1 0.15 10.8 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase DsbC_N PF10411.9 ORF17203 - 0.12 11.9 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 Disulfide bond isomerase protein N-terminus USP7_ICP0_bdg PF12436.8 ORF14252 - 0.025 13.9 0.2 0.03 13.6 0.2 1.2 1 0 0 1 1 1 0 ICP0-binding domain of Ubiquitin-specific protease 7 FA_synthesis PF02504.15 ORF13644 - 1.7e-67 227.8 0.0 2e-67 227.6 0.0 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein PB1 PF00564.24 ORF111471 - 5.8e-08 32.6 0.1 1e-07 31.8 0.1 1.3 1 0 0 1 1 1 1 PB1 domain Rtt102p PF09510.10 ORF111471 - 2.6 8.2 7.7 1 9.6 4.9 1.6 1 1 1 2 2 2 0 Rtt102p-like transcription regulator protein Swi5 PF07061.11 ORF111070 - 0.045 13.8 1.8 0.086 12.9 1.0 1.9 2 0 0 2 2 2 0 Swi5 Spc24 PF08286.11 ORF111070 - 0.1 12.8 0.2 0.23 11.7 0.2 1.6 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Snapin_Pallidin PF14712.6 ORF111070 - 0.25 11.8 5.5 0.58 10.6 3.5 2.2 2 0 0 2 2 2 0 Snapin/Pallidin PP2C PF00481.21 ORF108810 - 7.3e-38 130.7 0.2 8.1e-38 130.5 0.2 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF108810 - 1.8e-05 24.5 0.0 3.2e-05 23.6 0.0 1.4 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF108810 - 0.035 14.0 0.4 0.2 11.6 0.1 1.9 2 0 0 2 2 2 0 Stage II sporulation protein E (SpoIIE) Raptor_N PF14538.6 ORF107954 - 0.0013 18.8 1.0 0.002 18.1 0.7 1.4 1 1 0 1 1 1 1 Raptor N-terminal CASPase like domain DAO PF01266.24 ORF107446 - 5.2e-10 39.4 0.0 5.8e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF107446 - 2.3e-06 27.7 0.0 4.2e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF107446 - 0.00013 21.3 0.0 0.0002 20.7 0.0 1.2 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 ORF107446 - 0.00043 19.6 0.0 0.00047 19.5 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 ORF107446 - 0.00077 19.5 0.0 0.0015 18.5 0.0 1.6 1 1 0 1 1 1 1 FAD-NAD(P)-binding ApbA PF02558.16 ORF107446 - 0.0076 15.9 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA FAD_binding_2 PF00890.24 ORF107446 - 0.0085 15.2 0.0 0.013 14.6 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain DUF1188 PF06690.11 ORF107446 - 0.013 15.1 0.0 0.018 14.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) AlaDh_PNT_C PF01262.21 ORF107446 - 0.019 14.2 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 ORF107446 - 0.021 13.7 0.0 0.028 13.3 0.0 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Mqo PF06039.15 ORF107446 - 0.024 13.2 0.0 0.034 12.7 0.0 1.2 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) FAD_binding_3 PF01494.19 ORF107446 - 0.028 13.7 0.0 0.036 13.3 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.27 ORF107446 - 0.028 15.0 0.0 0.051 14.1 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 ORF107446 - 0.036 14.5 0.0 0.048 14.1 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding Shikimate_DH PF01488.20 ORF107446 - 0.038 14.0 0.0 0.066 13.3 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Glu_dehyd_C PF16912.5 ORF107446 - 0.06 12.8 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus 3HCDH_N PF02737.18 ORF107446 - 0.088 12.7 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF2880 PF11082.8 ORF106655 - 0.11 12.8 0.1 10 6.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2880) DOMON PF03351.17 ORF106637 - 1.6e-16 60.6 1.0 2.8e-16 59.9 1.0 1.4 1 0 0 1 1 1 1 DOMON domain CDH-cyt PF16010.5 ORF106637 - 6.4e-07 29.2 3.3 9.5e-07 28.7 3.4 1.3 1 1 0 1 1 1 1 Cytochrome domain of cellobiose dehydrogenase DUF1993 PF09351.10 ORF10421 - 0.025 14.7 0.8 1.6 8.8 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1993) CSTF_C PF14304.6 ORF10421 - 0.1 12.2 4.6 4.3 7.0 0.6 2.3 2 0 0 2 2 2 0 Transcription termination and cleavage factor C-terminal DUF2742 PF10888.8 ORF10421 - 1.3 9.3 5.8 7.1 7.0 0.8 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2742) MqsA_antitoxin PF15731.5 ORF104070 - 0.044 13.9 0.2 0.09 12.9 0.2 1.5 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA DUF1246 PF06849.12 ORF104070 - 0.11 12.5 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1246) BMC PF00936.19 NODE_36124_length_595_cov_3.496429_g29009_i0reverse_frame_1 - 0.047 13.7 0.0 0.1 12.6 0.0 1.6 1 0 0 1 1 1 0 BMC domain RCC1_2 PF13540.6 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 4e-06 26.5 12.8 0.16 11.8 0.7 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.00035 21.0 0.0 10 6.7 0.0 3.9 4 1 0 4 4 4 1 Spectrin repeat DUF155 PF02582.14 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.00079 19.6 0.5 20 5.2 0.1 4.0 2 1 1 3 3 3 1 Uncharacterised ACR, YagE family COG1723 POX PF07526.11 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.028 15.0 0.9 14 6.3 0.0 3.3 4 0 0 4 4 4 0 Associated with HOX Inhibitor_I36 PF03995.13 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.03 14.2 2.6 6.7 6.7 0.0 3.2 3 0 0 3 3 3 0 Peptidase inhibitor family I36 MinC_C PF03775.16 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.071 13.1 1.4 7.4 6.6 0.0 3.6 3 1 0 4 4 4 0 Septum formation inhibitor MinC, C-terminal domain PPR_3 PF13812.6 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.085 12.9 0.0 12 6.1 0.0 2.7 2 0 0 2 2 2 0 Pentatricopeptide repeat domain DUF2016 PF09436.10 NODE_36096_length_595_cov_462.928571_g28983_i0forward_frame_1 - 0.0057 16.4 0.2 1.3 8.9 0.0 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF2016) Colicin-DNase PF12639.7 NODE_36092_length_595_cov_1026.180357_g28979_i0forward_frame_1 - 0.031 15.1 0.1 0.044 14.6 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin DUF3623 PF12291.8 NODE_36092_length_595_cov_1026.180357_g28979_i0forward_frame_1 - 0.085 12.0 0.2 0.15 11.2 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3623) MFS_1 PF07690.16 NODE_36081_length_596_cov_2.204991_g28970_i0reverse_frame_1 - 3.2e-07 29.6 8.5 4e-07 29.3 8.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily POTRA PF07244.15 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 1.7e-33 115.0 0.4 2.1e-12 47.5 0.0 3.0 3 0 0 3 3 3 3 Surface antigen variable number repeat POTRA_2 PF08479.11 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 9.2e-06 25.4 0.0 0.018 14.8 0.0 3.2 3 0 0 3 3 3 2 POTRA domain, ShlB-type POTRA_1 PF08478.10 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 0.00013 22.2 0.0 0.11 12.9 0.0 3.5 4 0 0 4 4 4 1 POTRA domain, FtsQ-type Polysacc_deac_3 PF15421.6 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 0.045 12.2 0.0 0.088 11.3 0.0 1.5 1 1 0 1 1 1 0 Putative polysaccharide deacetylase DUF4101 PF13355.6 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 0.064 13.7 0.1 7.1 7.1 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4101) DAO_C PF16901.5 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 0.12 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 C-terminal domain of alpha-glycerophosphate oxidase DDE_Tnp_1_4 PF13701.6 NODE_36077_length_596_cov_2.992870_g28966_i0forward_frame_1 - 0.017 13.4 0.1 0.025 12.8 0.1 1.2 1 0 0 1 1 1 0 Transposase DDE domain group 1 DUF842 PF05811.13 NODE_36066_length_596_cov_78.969697_g28955_i0forward_frame_1 - 0.019 14.7 0.0 0.032 13.9 0.0 1.3 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) Ank_4 PF13637.6 NODE_36057_length_596_cov_94.301248_g28946_i0forward_frame_1 - 1.8e-27 95.4 4.8 1.3e-09 38.4 0.1 3.7 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_36057_length_596_cov_94.301248_g28946_i0forward_frame_1 - 9e-25 87.1 0.6 4.3e-12 46.4 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_36057_length_596_cov_94.301248_g28946_i0forward_frame_1 - 8.9e-24 83.3 1.4 2.8e-07 30.7 0.0 4.4 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 NODE_36057_length_596_cov_94.301248_g28946_i0forward_frame_1 - 2.3e-16 59.4 0.7 1.1e-05 25.6 0.0 4.2 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 NODE_36057_length_596_cov_94.301248_g28946_i0forward_frame_1 - 6.1e-15 53.8 0.1 0.00056 20.2 0.0 4.4 5 0 0 5 5 5 3 Ankyrin repeat RCC1_2 PF13540.6 NODE_36034_length_596_cov_403.467023_g28923_i0forward_frame_1 - 1.6e-06 27.7 8.6 1.1 9.1 0.2 4.4 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat GST_C_2 PF13410.6 NODE_36034_length_596_cov_403.467023_g28923_i0forward_frame_1 - 0.056 13.5 0.1 4.7 7.3 0.0 3.0 1 1 1 2 2 2 0 Glutathione S-transferase, C-terminal domain UPF0029 PF01205.19 NODE_36007_length_597_cov_141.258007_g27271_i1reverse_frame_1 - 9.7e-31 106.2 0.0 1.4e-30 105.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF4885 PF16226.5 NODE_36007_length_597_cov_141.258007_g27271_i1reverse_frame_1 - 0.07 12.2 0.0 0.096 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4885) DUF2946 PF11162.8 NODE_35994_length_597_cov_546.816726_g28890_i0reverse_frame_1 - 0.23 12.1 0.4 0.23 12.1 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2946) CDC45 PF02724.14 NODE_35994_length_597_cov_546.816726_g28890_i0forward_frame_1 - 4.7 5.4 9.5 5 5.3 9.5 1.1 1 0 0 1 1 1 0 CDC45-like protein Acetyltransf_1 PF00583.25 NODE_35976_length_598_cov_91.094139_g28878_i0reverse_frame_3 - 6.6e-10 39.3 0.0 8.3e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 NODE_35976_length_598_cov_91.094139_g28878_i0reverse_frame_3 - 1.1e-09 38.3 0.1 1.5e-09 37.8 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 NODE_35976_length_598_cov_91.094139_g28878_i0reverse_frame_3 - 0.0002 21.8 0.1 0.00034 21.0 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 NODE_35976_length_598_cov_91.094139_g28878_i0reverse_frame_3 - 0.00058 20.6 0.0 0.00079 20.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_35976_length_598_cov_91.094139_g28878_i0reverse_frame_3 - 0.0064 16.4 0.1 0.012 15.5 0.1 1.4 1 0 0 1 1 1 1 FR47-like protein Guanylate_cyc_2 PF09778.9 NODE_35976_length_598_cov_91.094139_g28878_i0reverse_frame_3 - 0.015 14.6 0.1 0.034 13.5 0.2 1.5 2 0 0 2 2 2 0 Guanylylate cyclase Acetyltransf_9 PF13527.7 NODE_35976_length_598_cov_91.094139_g28878_i0reverse_frame_3 - 0.033 14.2 0.0 0.052 13.6 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 NODE_35976_length_598_cov_91.094139_g28878_i0reverse_frame_3 - 0.11 12.7 0.1 0.44 10.7 0.0 1.9 1 1 1 2 2 2 0 GCN5-related N-acetyl-transferase PHD PF00628.29 NODE_35969_length_598_cov_108.779751_g28871_i0forward_frame_3 - 3.5e-08 33.2 5.9 3.5e-08 33.2 5.9 2.2 2 0 0 2 2 2 1 PHD-finger Cementoin PF10511.9 NODE_35969_length_598_cov_108.779751_g28871_i0forward_frame_2 - 0.074 13.3 3.2 0.13 12.6 2.2 1.9 1 1 0 1 1 1 0 Trappin protein transglutaminase binding domain CitX PF03802.14 NODE_35963_length_598_cov_163.994671_g28865_i0reverse_frame_2 - 0.035 13.9 0.3 0.051 13.3 0.3 1.4 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Ribosomal_L11 PF00298.19 NODE_35958_length_598_cov_200.790409_g28860_i0reverse_frame_2 - 3.2e-10 40.4 0.1 6.6e-10 39.4 0.1 1.6 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 NODE_35958_length_598_cov_200.790409_g28860_i0reverse_frame_2 - 5.5e-06 26.1 0.1 1.1e-05 25.1 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Chal_sti_synt_C PF02797.15 NODE_35958_length_598_cov_200.790409_g28860_i0reverse_frame_2 - 0.14 12.2 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Chalcone and stilbene synthases, C-terminal domain MMtag PF10159.9 NODE_35951_length_598_cov_447.088810_g28854_i0reverse_frame_3 - 2.5e-15 56.5 4.2 2.5e-15 56.5 4.2 2.4 3 0 0 3 3 3 1 Multiple myeloma tumor-associated TMEM100 PF16311.5 NODE_35938_length_599_cov_5.136525_g28843_i0reverse_frame_3 - 0.24 11.0 1.7 0.27 10.8 0.3 1.8 1 1 1 2 2 2 0 Transmembrane protein 100 CPDase PF07823.11 NODE_35938_length_599_cov_5.136525_g28843_i0forward_frame_2 - 0.15 11.8 2.3 0.091 12.4 0.7 1.4 2 0 0 2 2 2 0 Cyclic phosphodiesterase-like protein YtxH PF12732.7 NODE_35938_length_599_cov_5.136525_g28843_i0forward_frame_2 - 0.89 10.1 12.7 3.8 8.1 1.5 3.3 1 1 1 2 2 2 0 YtxH-like protein Spc7 PF08317.11 NODE_35938_length_599_cov_5.136525_g28843_i0forward_frame_2 - 4.5 6.1 25.4 0.36 9.7 1.8 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein Cnn_1N PF07989.11 NODE_35938_length_599_cov_5.136525_g28843_i0forward_frame_2 - 5.2 7.3 24.7 2.3 8.4 2.0 4.2 2 1 2 4 4 4 0 Centrosomin N-terminal motif 1 MIT PF04212.18 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 9.6e-05 22.4 10.2 0.00013 22.0 9.4 1.7 1 1 0 1 1 1 1 MIT (microtubule interacting and transport) domain Peptidase_U49 PF10463.9 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 0.065 13.0 3.3 0.055 13.2 2.1 1.5 1 1 0 1 1 1 0 Peptidase U49 PMEI PF04043.15 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 0.22 11.9 3.2 0.33 11.3 3.2 1.2 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor Syntaxin-18_N PF10496.9 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 0.84 9.9 6.9 0.3 11.4 0.9 2.6 1 1 1 2 2 2 0 SNARE-complex protein Syntaxin-18 N-terminus DUF4259 PF14078.6 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 0.95 10.2 4.7 0.71 10.6 3.4 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4259) STAT_alpha PF01017.20 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 3 7.7 9.5 8.2 6.3 5.3 2.2 1 1 1 2 2 2 0 STAT protein, all-alpha domain DUF3159 PF11361.8 NODE_35927_length_599_cov_95.297872_g28832_i0reverse_frame_2 - 0.14 11.9 0.1 0.19 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3159) Glyco_transf_15 PF01793.16 NODE_35922_length_599_cov_115.767730_g27701_i1reverse_frame_3 - 1.5e-12 47.4 0.2 1.9e-12 47.1 0.2 1.1 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase Cu_amine_oxid PF01179.20 NODE_35896_length_600_cov_2.302655_g28806_i0reverse_frame_2 - 2e-18 66.5 0.4 2.6e-18 66.1 0.4 1.1 1 0 0 1 1 1 1 Copper amine oxidase, enzyme domain Aldedh PF00171.22 NODE_35896_length_600_cov_2.302655_g28806_i0forward_frame_2 - 1.8e-38 132.3 0.0 2.2e-38 132.0 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Flavi_propep PF01570.17 NODE_35896_length_600_cov_2.302655_g28806_i0forward_frame_2 - 0.019 14.9 0.3 0.038 13.9 0.3 1.4 1 0 0 1 1 1 0 Flavivirus polyprotein propeptide DUF4820 PF16091.5 NODE_35895_length_600_cov_2.366372_g28805_i0reverse_frame_3 - 0.035 13.5 1.5 0.047 13.0 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) GntR PF00392.21 NODE_35895_length_600_cov_2.366372_g28805_i0reverse_frame_2 - 3e-15 55.6 0.0 6.2e-15 54.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family LRR_6 PF13516.6 NODE_35893_length_600_cov_2.984071_g28803_i0reverse_frame_3 - 0.00018 21.3 2.3 0.0004 20.2 1.3 4.1 4 0 0 4 4 4 2 Leucine Rich repeat LRR_4 PF12799.7 NODE_35893_length_600_cov_2.984071_g28803_i0reverse_frame_3 - 0.0064 16.9 2.1 0.0064 16.9 2.1 4.5 1 1 4 5 5 5 3 Leucine Rich repeats (2 copies) UCH PF00443.29 NODE_35892_length_600_cov_3.046018_g28802_i0forward_frame_3 - 8.2e-07 28.8 0.2 1.1e-06 28.3 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Njmu-R1 PF15053.6 NODE_35892_length_600_cov_3.046018_g28802_i0forward_frame_3 - 0.02 14.0 0.2 0.027 13.6 0.2 1.1 1 0 0 1 1 1 0 Mjmu-R1-like protein family DUF3683 PF12447.8 NODE_35890_length_600_cov_3.886726_g28800_i0reverse_frame_3 - 0.088 12.9 0.5 0.19 11.9 0.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3683) PDCD7 PF16021.5 NODE_35890_length_600_cov_3.886726_g28800_i0reverse_frame_3 - 0.15 11.2 6.8 0.2 10.7 6.8 1.1 1 0 0 1 1 1 0 Programmed cell death protein 7 Orexin_rec2 PF03827.13 NODE_35885_length_600_cov_80.277876_g28795_i0forward_frame_3 - 0.34 11.0 2.3 0.32 11.0 0.3 1.9 2 0 0 2 2 2 0 Orexin receptor type 2 Arm PF00514.23 NODE_35881_length_600_cov_96.410619_g28791_i0forward_frame_2 - 0.0036 17.3 0.1 31 4.8 0.0 3.4 3 0 0 3 3 3 3 Armadillo/beta-catenin-like repeat DUF3361 PF11841.8 NODE_35881_length_600_cov_96.410619_g28791_i0forward_frame_2 - 0.21 11.5 1.9 0.14 12.0 0.3 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3361) Histone_H2A_C PF16211.5 NODE_35881_length_600_cov_96.410619_g28791_i0forward_frame_2 - 0.71 9.7 4.7 3.6 7.4 0.0 2.5 2 0 0 2 2 2 0 C-terminus of histone H2A DUF4685 PF15737.5 NODE_35875_length_600_cov_114.619469_g28786_i0forward_frame_3 - 0.073 13.5 4.9 0.13 12.7 4.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4685) MFS_1 PF07690.16 NODE_35865_length_600_cov_185.274336_g4706_i1reverse_frame_3 - 0.00096 18.2 0.6 0.0011 18.0 0.6 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Ras PF00071.22 ORF98859 - 2.3e-50 170.4 0.0 2.7e-50 170.1 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF98859 - 7.2e-21 74.6 0.0 1.6e-20 73.5 0.0 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF98859 - 2.9e-09 36.6 0.0 3.5e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family SPRY PF00622.28 ORF98012 - 2.1e-12 47.2 0.7 5.7e-12 45.8 0.4 1.7 2 0 0 2 2 2 1 SPRY domain CspB_prodomain PF18425.1 ORF98012 - 0.042 13.9 0.1 0.069 13.2 0.1 1.3 1 0 0 1 1 1 0 Csp protease B prodomain Neuralized PF07177.12 ORF98012 - 0.1 12.6 0.0 0.37 10.8 0.0 1.8 1 1 0 1 1 1 0 Neuralized Exostosin PF03016.15 ORF96012 - 0.0038 16.5 0.0 0.0051 16.1 0.0 1.1 1 0 0 1 1 1 1 Exostosin family HD_2 PF12917.7 ORF95110 - 3.2e-77 258.4 1.4 3.6e-77 258.2 1.4 1.0 1 0 0 1 1 1 1 HD containing hydrolase-like enzyme HD_3 PF13023.6 ORF95110 - 7.7e-17 61.7 0.5 9.7e-17 61.4 0.5 1.2 1 0 0 1 1 1 1 HD domain HD PF01966.22 ORF95110 - 2e-07 31.3 0.2 2.5e-07 30.9 0.2 1.2 1 0 0 1 1 1 1 HD domain HDOD PF08668.12 ORF95110 - 0.056 12.9 0.0 0.08 12.4 0.0 1.2 1 0 0 1 1 1 0 HDOD domain KN17_SH3 PF18131.1 ORF93731 - 1.2e-20 73.3 2.5 1.8e-19 69.6 0.3 2.2 2 0 0 2 2 2 1 KN17 SH3-like C-terminal domain DUF438 PF04282.13 ORF93731 - 0.024 14.6 1.2 0.054 13.5 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF438) Herpes_U47 PF05467.11 ORF93731 - 0.13 10.4 1.0 0.15 10.1 1.0 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 DUF4199 PF13858.6 ORF92246 - 0.27 11.6 15.6 0.36 11.2 8.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) ECH_1 PF00378.20 ORF92189 - 1e-48 165.8 0.1 1.2e-48 165.6 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF92189 - 8e-27 94.6 0.2 1e-26 94.3 0.2 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF2462 PF09495.10 ORF91384 - 0.1 13.4 1.2 16 6.3 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2462) DUF2207 PF09972.9 ORF89540 - 0.0032 16.3 0.2 0.0035 16.2 0.2 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) ABC2_membrane_3 PF12698.7 ORF89540 - 0.0067 15.6 3.3 0.0088 15.2 3.3 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein Orf78 PF06024.12 ORF89540 - 0.011 16.0 0.1 0.018 15.3 0.1 1.4 1 0 0 1 1 1 0 Orf78 (ac78) LRRC37AB_C PF14914.6 ORF89540 - 0.029 14.3 0.4 0.047 13.6 0.4 1.4 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain TMEM132D_C PF15706.5 ORF89540 - 0.032 14.0 0.1 0.051 13.4 0.1 1.3 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF2771 PF10969.8 ORF89540 - 0.039 14.0 1.0 0.68 10.0 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2771) Peptidase_M56 PF05569.11 ORF89540 - 0.097 11.8 0.3 0.12 11.5 0.3 1.2 1 0 0 1 1 1 0 BlaR1 peptidase M56 EssA PF10661.9 ORF89540 - 0.13 12.1 3.8 0.12 12.2 1.0 2.2 2 0 0 2 2 2 0 WXG100 protein secretion system (Wss), protein EssA DUF872 PF05915.12 ORF89540 - 0.16 12.2 0.4 0.26 11.5 0.3 1.4 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) DUF2254 PF10011.9 ORF89499 - 0.046 12.6 0.1 0.053 12.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) PLDc_2 PF13091.6 ORF89381 - 1.6e-25 89.5 0.0 2e-25 89.2 0.0 1.1 1 0 0 1 1 1 1 PLD-like domain Regulator_TrmB PF11495.8 ORF89381 - 0.071 12.3 0.0 0.084 12.0 0.0 1.2 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB PLDc PF00614.22 ORF89381 - 0.071 13.3 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 Phospholipase D Active site motif PP_kinase_C PF13090.6 ORF89381 - 0.19 11.2 0.0 1 8.8 0.0 1.8 2 0 0 2 2 2 0 Polyphosphate kinase C-terminal domain 2 Med19 PF10278.9 ORF83460 - 0.031 14.2 1.2 0.05 13.5 0.2 1.8 1 1 0 2 2 2 0 Mediator of RNA pol II transcription subunit 19 FlgT_M PF16539.5 ORF83460 - 1.2 9.2 5.7 1.3 9.1 1.0 2.1 1 1 1 2 2 2 0 Flagellar assembly protein T, middle domain Cation_ATPase PF13246.6 ORF82091 - 4.4 7.4 6.5 2.2 8.4 1.2 2.5 1 1 2 3 3 3 0 Cation transport ATPase (P-type) LRR_6 PF13516.6 ORF78654 - 7.5e-09 35.0 1.1 0.00074 19.4 0.1 3.5 3 0 0 3 3 3 2 Leucine Rich repeat LRR_1 PF00560.33 ORF78654 - 3.1e-05 23.9 0.7 3.6 8.5 0.0 3.6 3 0 0 3 3 3 2 Leucine Rich Repeat LRR_8 PF13855.6 ORF78654 - 0.0056 16.4 3.7 5.8 6.8 3.4 3.2 2 1 0 2 2 2 1 Leucine rich repeat LRR_4 PF12799.7 ORF78654 - 0.02 15.3 2.5 0.059 13.8 0.7 2.5 2 1 0 2 2 2 0 Leucine Rich repeats (2 copies) DUF3139 PF11337.8 ORF77816 - 8.4 7.1 8.5 0.77 10.5 0.7 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF3139) CDKN3 PF05706.12 ORF77742 - 2.5e-06 27.3 0.0 3.4e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase PF00102.27 ORF77742 - 0.047 13.2 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase DSPc PF00782.20 ORF77742 - 0.12 12.2 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain Asp PF00026.23 ORF77232 - 6.1e-10 39.0 0.0 7.5e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF77232 - 0.0006 19.6 0.0 0.00096 19.0 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Chromate_transp PF02417.15 ORF76330 - 0.066 13.4 0.2 0.09 12.9 0.2 1.2 1 0 0 1 1 1 0 Chromate transporter PTS_2-RNA PF01885.16 ORF76251 - 3.4e-38 131.5 0.0 4.3e-38 131.2 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PARP PF00644.20 ORF76251 - 0.031 13.9 0.0 0.046 13.3 0.0 1.3 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain DUF2358 PF10184.9 ORF74955 - 1.4e-07 31.7 0.0 2.1e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2358) Abhydrolase_1 PF00561.20 ORF74565 - 4.9e-09 36.2 0.1 0.0023 17.6 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF74565 - 0.00027 20.3 0.0 0.0013 18.1 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 ORF74565 - 0.0022 17.7 0.3 0.012 15.2 0.3 2.0 1 1 0 1 1 1 1 Putative esterase BAAT_C PF08840.11 ORF74565 - 0.054 13.4 0.0 0.082 12.8 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF4884 PF16225.5 ORF74565 - 0.055 13.5 0.1 0.11 12.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4884) Vac7 PF12751.7 ORF74454 - 0.18 11.2 0.7 0.28 10.6 0.7 1.2 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 Peptidase_U4 PF03419.13 ORF74454 - 0.24 10.7 1.0 0.25 10.6 1.0 1.2 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Tetraspanin PF00335.20 ORF74454 - 2.6 7.7 17.5 0.13 11.9 9.9 2.0 1 1 1 2 2 2 0 Tetraspanin family Glyco_transf_25 PF01755.17 ORF73983 - 8.9e-13 48.6 0.0 4.2e-11 43.1 0.0 2.1 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) Gypsy PF07253.11 ORF73176 - 0.045 12.3 0.0 0.059 11.9 0.0 1.1 1 0 0 1 1 1 0 Gypsy protein DUF3891 PF13030.6 ORF73176 - 0.1 12.3 0.0 0.21 11.3 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3891) RCC1_2 PF13540.6 ORF73102 - 5.7e-09 35.5 12.5 0.21 11.4 0.4 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat Cupin_8 PF13621.6 ORF72364 - 4.8e-23 82.2 0.1 6.3e-23 81.8 0.1 1.1 1 0 0 1 1 1 1 Cupin-like domain JmjC PF02373.22 ORF72364 - 0.039 14.4 0.0 0.054 13.9 0.0 1.3 1 0 0 1 1 1 0 JmjC domain, hydroxylase Cupin_2 PF07883.11 ORF72364 - 0.069 12.9 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Cupin domain ABC_tran_Xtn PF12848.7 ORF71755 - 0.21 11.6 0.9 0.36 10.9 0.1 1.7 2 0 0 2 2 2 0 ABC transporter DnaJ_C PF01556.18 ORF70310 - 3.8e-30 104.9 0.5 4.9e-30 104.6 0.5 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain Glyco_hydro_4 PF02056.16 ORF70310 - 0.035 13.7 0.0 0.067 12.7 0.0 1.4 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase FliG_N PF14842.6 ORF70310 - 0.06 13.9 0.3 0.098 13.2 0.3 1.3 1 0 0 1 1 1 0 FliG N-terminal domain DUF229 PF02995.17 ORF68161 - 3.5e-19 68.8 3.2 4.1e-19 68.6 3.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF68161 - 2.7e-09 36.9 0.4 3.5e-09 36.5 0.4 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF68161 - 0.0042 16.7 0.0 0.0047 16.6 0.0 1.2 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF1501 PF07394.12 ORF68161 - 0.16 11.0 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) ABC_membrane PF00664.23 ORF66730 - 1.7e-05 24.6 1.6 2.5e-05 24.1 1.6 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region FA_desaturase PF00487.24 ORF66730 - 0.14 12.0 1.9 0.24 11.2 1.9 1.5 1 1 0 1 1 1 0 Fatty acid desaturase DUF2207 PF09972.9 ORF66730 - 0.18 10.5 1.0 0.25 10.1 0.1 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) Imm40 PF15569.6 ORF66073 - 0.043 13.9 0.8 3 8.0 0.1 2.3 2 0 0 2 2 2 0 Immunity protein 40 Phage_pRha PF09669.10 ORF66073 - 0.11 13.1 3.0 0.17 12.5 1.8 2.0 2 0 0 2 2 2 0 Phage regulatory protein Rha (Phage_pRha) DUF1919 PF08942.10 ORF66073 - 0.11 12.0 5.5 1.2 8.5 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1919) Nitrate_red_del PF02613.15 ORF64333 - 4.5e-24 85.0 0.4 4.5e-24 85.0 0.4 1.7 1 1 1 2 2 2 1 Nitrate reductase delta subunit Haem_oxygenas_2 PF14518.6 ORF64333 - 0.056 13.2 0.0 0.09 12.6 0.0 1.4 1 0 0 1 1 1 0 Iron-containing redox enzyme SH3_16 PF18348.1 ORF62561 - 0.2 11.5 0.0 0.37 10.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial dipeptidyl-peptidase Sh3 domain IQ PF00612.27 ORF61674 - 3.1e-08 32.7 11.6 0.0029 17.3 1.2 3.6 3 0 0 3 3 3 3 IQ calmodulin-binding motif DUF515 PF04415.12 ORF61674 - 0.015 13.7 0.4 0.017 13.5 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) AF0941-like PF14591.6 ORF61674 - 0.058 14.0 0.3 0.099 13.2 0.3 1.4 1 0 0 1 1 1 0 AF0941-like Pex2_Pex12 PF04757.14 ORF61674 - 0.069 12.7 0.1 0.13 11.9 0.1 1.6 1 1 0 1 1 1 0 Pex2 / Pex12 amino terminal region ArAE_1 PF06081.11 ORF61674 - 0.21 11.7 1.2 0.35 11.0 0.2 1.7 2 0 0 2 2 2 0 Aromatic acid exporter family member 1 Kri1 PF05178.12 ORF61674 - 0.81 10.3 4.5 1.6 9.4 1.0 2.3 2 0 0 2 2 2 0 KRI1-like family CLZ PF16526.5 ORF61157 - 0.00079 19.7 11.4 0.3 11.5 0.3 2.4 1 1 1 2 2 2 2 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Cep57_MT_bd PF06657.13 ORF61157 - 0.00085 19.7 6.3 0.5 10.9 0.0 3.0 2 1 1 3 3 3 3 Centrosome microtubule-binding domain of Cep57 LPP PF04728.13 ORF61157 - 0.01 16.2 5.2 0.073 13.5 2.3 3.0 3 0 0 3 3 3 0 Lipoprotein leucine-zipper V_ATPase_I PF01496.19 ORF61157 - 0.51 8.2 14.7 0.63 7.9 14.7 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family APG6_N PF17675.1 ORF61157 - 0.55 10.7 16.2 1.1 9.8 16.2 1.5 1 0 0 1 1 1 0 Apg6 coiled-coil region TSC22 PF01166.18 ORF61157 - 0.86 10.0 12.5 1.9 8.8 0.1 3.2 2 1 1 3 3 3 0 TSC-22/dip/bun family DUF4140 PF13600.6 ORF61157 - 1.2 9.6 6.2 2.5 8.6 2.9 2.3 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF2730 PF10805.8 ORF61157 - 1.3 9.2 7.9 2 8.6 3.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) DUF3450 PF11932.8 ORF61157 - 1.8 7.8 12.0 0.18 11.1 7.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF4407 PF14362.6 ORF61157 - 4.9 6.4 18.8 1.1e+02 1.9 18.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Seryl_tRNA_N PF02403.22 ORF61157 - 5 7.4 24.6 1.9 8.7 0.8 2.9 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain HI0933_like PF03486.14 ORF60975 - 0.14 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein MFS_1 PF07690.16 ORF60640 - 1.1e-11 44.3 13.1 1.1e-11 44.3 13.1 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily FPN1 PF06963.12 ORF60640 - 0.06 11.9 5.8 0.07 11.7 5.8 1.2 1 0 0 1 1 1 0 Ferroportin1 (FPN1) Peptidase_M48_N PF16491.5 ORF60640 - 0.1 12.5 3.2 0.18 11.7 3.2 1.5 1 0 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices GRDB PF07355.12 ORF57086 - 0.0006 19.2 0.3 0.00088 18.6 0.2 1.4 1 1 1 2 2 2 1 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TMEM51 PF15345.6 ORF57086 - 0.037 13.9 1.3 0.044 13.6 1.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 51 SHMT PF00464.19 ORF54218 - 9.3e-48 162.8 0.0 1.2e-47 162.4 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase P3A PF08727.11 ORF54218 - 0.009 15.4 0.1 0.043 13.2 0.0 2.0 2 0 0 2 2 2 1 Poliovirus 3A protein like AAA_lid_3 PF17862.1 ORF54218 - 0.013 15.3 0.0 0.028 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA+ lid domain Trns_repr_metal PF02583.17 ORF54218 - 0.044 14.1 0.0 0.074 13.4 0.0 1.3 1 0 0 1 1 1 0 Metal-sensitive transcriptional repressor LDcluster4 PF18306.1 ORF54218 - 0.049 13.2 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 SLOG cluster4 family HAD_2 PF13419.6 ORF53544 - 6.9e-13 49.1 0.0 9.4e-13 48.6 0.0 1.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF53544 - 7.1e-09 36.3 0.0 4.9e-08 33.5 0.0 1.9 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF53544 - 7.3e-07 29.2 0.0 1.7e-06 28.0 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Acid_PPase PF12689.7 ORF53544 - 1.3e-05 25.1 0.0 0.00016 21.6 0.0 2.1 1 1 0 1 1 1 1 Acid Phosphatase HAD PF12710.7 ORF53544 - 0.00036 21.0 0.1 0.0004 20.8 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 ORF53544 - 0.011 15.5 0.0 0.08 12.6 0.0 2.4 1 1 1 2 2 2 0 Polynucleotide kinase 3 phosphatase DUF559 PF04480.12 ORF53071 - 0.00041 20.2 0.3 0.29 11.0 0.0 2.6 1 1 1 2 2 2 2 Protein of unknown function (DUF559) PspB PF06667.12 ORF51268 - 1.2 9.3 6.0 0.14 12.3 0.6 2.0 2 1 0 2 2 2 0 Phage shock protein B TALPID3 PF15324.6 ORF51268 - 2 6.0 10.7 2.3 5.8 10.7 1.0 1 0 0 1 1 1 0 Hedgehog signalling target Zip PF02535.22 ORF51268 - 5 6.2 8.4 6.3 5.9 8.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter tRNA_m1G_MT PF01746.21 ORF51218 - 2e-10 40.7 0.0 2.4e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 tRNA (Guanine-1)-methyltransferase RNA_Me_trans PF04252.13 ORF51218 - 5.6e-06 26.1 0.0 7.2e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Predicted SAM-dependent RNA methyltransferase AIRS_C PF02769.22 ORF51218 - 0.0074 16.4 0.1 0.012 15.8 0.1 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Spo0M PF07070.11 ORF51218 - 0.084 12.4 0.1 1.1 8.8 0.0 2.0 2 0 0 2 2 2 0 SpoOM protein TFIIIC_sub6 PF10419.9 ORF51218 - 0.16 11.8 0.1 0.38 10.6 0.1 1.5 1 0 0 1 1 1 0 TFIIIC subunit triple barrel domain KH_1 PF00013.29 ORF5120 - 8.5e-05 22.3 0.2 0.00018 21.2 0.2 1.5 1 0 0 1 1 1 1 KH domain KH_8 PF17903.1 ORF5120 - 0.0047 17.0 0.0 0.0084 16.2 0.0 1.4 1 0 0 1 1 1 1 Krr1 KH1 domain KH_4 PF13083.6 ORF5120 - 0.11 12.4 0.1 20 5.2 0.0 2.3 2 0 0 2 2 2 0 KH domain DUF4079 PF13301.6 ORF50572 - 9.6e-48 161.9 0.1 1.1e-47 161.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4079) DUF2157 PF09925.9 ORF50572 - 0.00024 20.9 2.5 0.00024 20.9 2.5 2.0 1 1 0 2 2 2 1 Predicted membrane protein (DUF2157) DUF2206 PF09971.9 ORF50572 - 0.015 14.1 0.0 0.021 13.6 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) DUF5129 PF17173.4 ORF50572 - 0.14 11.3 0.3 0.31 10.1 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5129) DUF2681 PF10883.8 ORF50572 - 0.2 12.1 0.1 0.59 10.6 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2681) Ras PF00071.22 ORF49804 - 4.1e-52 176.0 0.9 5.3e-52 175.7 0.9 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF49804 - 5.1e-28 97.7 1.2 6.1e-28 97.5 0.3 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF49804 - 8.3e-14 51.4 0.3 9.8e-14 51.2 0.3 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF49804 - 2.4e-06 27.1 0.3 3e-06 26.8 0.3 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF49804 - 0.00067 19.2 0.2 0.0014 18.2 0.1 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF49804 - 0.00073 19.5 1.9 0.18 11.7 0.3 2.4 1 1 2 3 3 3 2 RsgA GTPase MMR_HSR1 PF01926.23 ORF49804 - 0.0024 18.0 0.2 0.004 17.2 0.2 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF1640 PF07798.11 ORF49804 - 0.0057 16.7 0.3 0.0078 16.3 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) G-alpha PF00503.20 ORF49804 - 0.0097 15.1 5.8 0.067 12.3 2.5 2.5 1 1 1 2 2 2 1 G-protein alpha subunit FeoB_N PF02421.18 ORF49804 - 0.015 14.8 0.5 0.4 10.2 0.5 2.3 1 1 0 1 1 1 0 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 ORF49804 - 0.022 14.8 0.5 0.034 14.2 0.5 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Lipocalin_2 PF08212.12 ORF49456 - 0.0025 17.7 0.0 0.0035 17.3 0.0 1.2 1 0 0 1 1 1 1 Lipocalin-like domain Herpes_UL6 PF01763.16 ORF48710 - 0.11 10.9 0.0 0.15 10.6 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like HAD_2 PF13419.6 ORF48668 - 1.3e-10 41.7 0.0 1.6e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF48668 - 1.2e-09 38.8 0.0 1.3e-09 38.6 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF4258 PF14076.6 ORF48404 - 0.045 14.1 0.0 1.2 9.5 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4258) Integrase_Zn PF02022.19 ORF48269 - 5.7e-07 29.4 0.9 0.045 13.7 0.1 2.6 2 0 0 2 2 2 2 Integrase Zinc binding domain YceD PF02620.17 ORF47834 - 0.01 15.9 0.2 0.014 15.5 0.2 1.3 1 0 0 1 1 1 0 Large ribosomal RNA subunit accumulation protein YceD HEAT_2 PF13646.6 ORF46132 - 0.00017 21.9 1.5 0.0023 18.3 0.7 2.7 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF46132 - 0.011 15.9 4.5 6.7 7.3 0.0 4.8 5 0 0 5 5 5 0 HEAT repeat FKBP_C PF00254.28 ORF46028 - 1.2e-12 48.0 0.0 1.7e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase zf-C3H1 PF10650.9 ORF46028 - 0.093 12.5 0.4 0.15 11.8 0.4 1.3 1 0 0 1 1 1 0 Putative zinc-finger domain Tti2 PF10521.9 ORF45182 - 0.0041 16.7 0.6 0.0073 15.9 0.6 1.3 1 0 0 1 1 1 1 Tti2 family tRNA-synt_2 PF00152.20 ORF44676 - 1.1e-34 120.0 0.0 1.3e-34 119.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) Formyl_trans_N PF00551.19 ORF43613 - 1.8e-43 148.4 0.0 2e-43 148.2 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase Methyltransf_23 PF13489.6 ORF41690 - 2.5e-07 30.7 0.0 0.0017 18.2 0.0 2.1 1 1 1 2 2 2 2 Methyltransferase domain AdoMet_MTase PF07757.13 ORF41690 - 0.0084 16.4 0.0 0.013 15.8 0.0 1.3 1 0 0 1 1 1 1 Predicted AdoMet-dependent methyltransferase Methyltransf_11 PF08241.12 ORF41690 - 0.011 16.3 0.0 0.028 15.0 0.0 1.7 1 1 1 2 2 2 0 Methyltransferase domain Methyltransf_12 PF08242.12 ORF41690 - 0.034 14.9 0.0 0.21 12.4 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 ORF41690 - 0.045 14.4 0.0 0.092 13.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 ORF41690 - 0.22 11.1 0.0 0.49 9.9 0.0 1.5 2 0 0 2 2 2 0 Methyltransferase small domain Herpes_LMP2 PF07415.11 ORF41647 - 1.8 7.2 3.6 2.3 6.9 3.6 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein zf-RING_2 PF13639.6 ORF40256 - 3e-12 46.7 10.1 4.5e-12 46.1 10.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF40256 - 5.3e-10 38.9 6.6 8.3e-10 38.2 6.6 1.3 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF40256 - 2.1e-07 31.1 9.7 7.3e-07 29.4 9.7 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF40256 - 5.3e-07 29.4 9.1 8.9e-07 28.7 9.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF40256 - 4.7e-06 26.5 8.3 7.5e-06 25.9 8.3 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF40256 - 8.1e-06 25.6 8.2 1.3e-05 25.0 8.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF40256 - 1.6e-05 24.8 7.9 2.3e-05 24.3 7.9 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF40256 - 0.0014 18.6 4.0 0.0024 17.9 4.0 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF40256 - 0.0031 17.1 6.8 0.0059 16.2 6.8 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_3 PF13920.6 ORF40256 - 0.019 14.8 7.5 0.029 14.2 7.5 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-CCHC_6 PF15288.6 ORF40256 - 0.02 14.7 0.8 0.051 13.4 0.8 1.7 1 0 0 1 1 1 0 Zinc knuckle FANCL_C PF11793.8 ORF40256 - 0.044 14.0 3.6 0.081 13.1 3.6 1.4 1 0 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 ORF40256 - 0.045 13.9 5.3 0.093 12.9 5.3 1.5 1 1 0 1 1 1 0 RING-variant domain zf-Nse PF11789.8 ORF40256 - 0.22 11.3 4.5 0.37 10.6 4.5 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 ORF40256 - 0.24 11.6 5.4 0.49 10.6 5.4 1.5 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF40256 - 1.7 8.6 7.9 3 7.8 7.9 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Connexin PF00029.19 ORF38715 - 0.2 11.4 1.6 0.29 10.9 1.6 1.3 1 0 0 1 1 1 0 Connexin UPF0239 PF06783.11 ORF38715 - 0.31 11.2 7.0 0.73 10.1 7.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) MAP17 PF15807.5 ORF38715 - 3.5 7.9 6.4 3.1 8.1 5.1 1.6 1 1 1 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF1454 PF07305.12 ORF37937 - 1.4e-85 285.6 1.5 1.7e-85 285.3 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1454) AAA_33 PF13671.6 ORF37804 - 2.5e-12 47.1 0.3 1.2e-11 44.9 0.3 1.9 1 1 1 2 2 2 1 AAA domain UBA PF00627.31 ORF37804 - 0.00057 19.7 2.2 0.0011 18.8 0.2 2.5 3 0 0 3 3 3 1 UBA/TS-N domain Peptidase_M44 PF03410.13 ORF37758 - 0.00097 17.8 0.5 0.0013 17.5 0.5 1.2 1 0 0 1 1 1 1 Metallopeptidase from vaccinia pox DSBA PF01323.20 ORF37758 - 0.13 12.0 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain DUF1295 PF06966.12 ORF35901 - 3.4e-11 43.1 0.7 5.4e-11 42.5 0.2 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF35901 - 2.9e-07 30.8 1.2 2.9e-07 30.8 1.2 2.0 2 0 0 2 2 2 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF35901 - 9.9e-05 22.4 2.8 9.9e-05 22.4 2.8 1.6 2 0 0 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF35901 - 0.0015 18.9 4.3 0.0015 18.9 0.3 2.4 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family RdDM_RDM1 PF09187.10 ORF35901 - 0.039 14.0 0.1 0.06 13.4 0.1 1.3 1 0 0 1 1 1 0 RNA-directed DNA methylation 1 Spo7 PF03907.13 ORF35901 - 0.098 12.1 1.3 7.4 6.0 0.1 2.4 1 1 1 2 2 2 0 Spo7-like protein FHA PF00498.26 ORF35781 - 0.12 12.8 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 FHA domain Connexin PF00029.19 ORF34345 - 0.2 11.4 1.6 0.29 10.9 1.6 1.3 1 0 0 1 1 1 0 Connexin UPF0239 PF06783.11 ORF34345 - 0.31 11.2 7.0 0.73 10.1 7.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) MAP17 PF15807.5 ORF34345 - 3.5 7.9 6.4 3.1 8.1 5.1 1.6 1 1 1 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Abhydrolase_1 PF00561.20 ORF33956 - 4.9e-09 36.2 0.1 0.0023 17.6 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF33956 - 0.00027 20.3 0.0 0.0013 18.1 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 ORF33956 - 0.0022 17.7 0.3 0.012 15.2 0.3 2.0 1 1 0 1 1 1 1 Putative esterase BAAT_C PF08840.11 ORF33956 - 0.054 13.4 0.0 0.082 12.8 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF4884 PF16225.5 ORF33956 - 0.055 13.5 0.1 0.11 12.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4884) Dehalogenase PF13486.6 ORF33741 - 0.21 11.0 0.1 0.27 10.6 0.1 1.1 1 0 0 1 1 1 0 Reductive dehalogenase subunit Porphobil_deam PF01379.20 ORF32965 - 7.4e-25 87.7 0.1 2.7e-24 85.8 0.0 1.8 2 0 0 2 2 2 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 ORF32965 - 2.6e-10 40.5 0.0 1.1e-09 38.5 0.0 1.9 1 1 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain Glyco_hydro_1 PF00232.18 ORF31456 - 3.3e-16 58.7 0.3 4.6e-16 58.3 0.3 1.3 1 1 0 1 1 1 1 Glycosyl hydrolase family 1 YceD PF02620.17 ORF31435 - 0.01 15.9 0.2 0.014 15.5 0.2 1.3 1 0 0 1 1 1 0 Large ribosomal RNA subunit accumulation protein YceD RabGAP-TBC PF00566.18 ORF29064 - 1.5e-18 67.2 2.9 2.6e-18 66.5 2.9 1.4 1 0 0 1 1 1 1 Rab-GTPase-TBC domain JmjC PF02373.22 ORF27975 - 2.4e-28 98.8 0.0 4.2e-28 98.1 0.0 1.4 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cation_ATPase PF13246.6 ORF25004 - 4.4 7.4 6.5 2.2 8.4 1.2 2.5 1 1 2 3 3 3 0 Cation transport ATPase (P-type) DUF4199 PF13858.6 ORF24672 - 0.27 11.6 15.6 0.36 11.2 8.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) Cupin_5 PF06172.11 ORF20940 - 0.03 14.5 0.0 0.045 13.9 0.0 1.3 1 0 0 1 1 1 0 Cupin superfamily (DUF985) JIP_LZII PF16471.5 ORF20940 - 0.032 14.4 1.3 0.062 13.5 1.3 1.5 1 0 0 1 1 1 0 JNK-interacting protein leucine zipper II DUF4240 PF14024.6 ORF20940 - 0.04 14.1 0.2 0.066 13.4 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4240) FCH PF00611.23 ORF20940 - 0.048 14.0 0.6 0.41 10.9 0.5 2.2 2 0 0 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain TMF_DNA_bd PF12329.8 ORF20940 - 0.14 12.2 3.2 0.23 11.5 3.2 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding KH_1 PF00013.29 ORF18785 - 8.5e-05 22.3 0.2 0.00018 21.2 0.2 1.5 1 0 0 1 1 1 1 KH domain KH_8 PF17903.1 ORF18785 - 0.0047 17.0 0.0 0.0084 16.2 0.0 1.4 1 0 0 1 1 1 1 Krr1 KH1 domain KH_4 PF13083.6 ORF18785 - 0.11 12.4 0.1 20 5.2 0.0 2.3 2 0 0 2 2 2 0 KH domain Golgin_A5 PF09787.9 ORF18504 - 0.0046 16.5 8.8 0.006 16.1 8.8 1.3 1 0 0 1 1 1 1 Golgin subfamily A member 5 H-kinase_dim PF02895.14 ORF18504 - 0.0083 16.5 4.2 0.5 10.8 0.7 2.2 2 0 0 2 2 2 1 Signal transducing histidine kinase, homodimeric domain HMMR_N PF15905.5 ORF18504 - 0.02 14.4 16.9 0.036 13.5 16.8 1.5 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal RbsD_FucU PF05025.13 ORF18504 - 0.03 14.7 1.2 0.069 13.6 1.1 1.7 1 1 1 2 2 2 0 RbsD / FucU transport protein family TolA_bind_tri PF16331.5 ORF18504 - 0.046 13.8 5.6 0.25 11.4 2.4 2.9 2 1 1 3 3 3 0 TolA binding protein trimerisation Utp11 PF03998.13 ORF18504 - 0.047 13.6 6.8 0.052 13.5 6.8 1.2 1 0 0 1 1 1 0 Utp11 protein UPF0242 PF06785.11 ORF18504 - 0.082 13.0 15.8 3.4 7.7 12.7 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF18504 - 0.085 12.2 4.4 0.094 12.1 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 ORF18504 - 0.091 12.5 7.5 0.16 11.8 0.1 3.1 2 1 1 3 3 3 0 Septum formation initiator ATG16 PF08614.11 ORF18504 - 0.15 12.3 11.0 0.041 14.1 4.5 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) COG2 PF06148.11 ORF18504 - 0.15 12.1 4.9 0.24 11.5 2.5 2.2 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Nup54 PF13874.6 ORF18504 - 0.38 10.9 5.8 0.55 10.3 5.1 1.6 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 LPP PF04728.13 ORF18504 - 0.52 10.7 6.0 2.1 8.8 0.0 3.6 3 1 1 4 4 4 0 Lipoprotein leucine-zipper DUF641 PF04859.12 ORF18504 - 0.88 9.9 8.2 0.13 12.6 2.6 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Exonuc_VII_L PF02601.15 ORF18504 - 0.95 9.0 5.9 1.2 8.7 5.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit CENP-F_leu_zip PF10473.9 ORF18504 - 1.1 9.3 16.2 0.24 11.4 6.6 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YabA PF06156.13 ORF18504 - 1.1 9.9 11.9 0.63 10.7 3.1 2.3 1 1 0 2 2 2 0 Initiation control protein YabA TSC22 PF01166.18 ORF18504 - 1.4 9.3 6.7 3.1 8.2 0.0 3.2 2 1 1 3 3 3 0 TSC-22/dip/bun family Jnk-SapK_ap_N PF09744.9 ORF18504 - 1.5 9.0 14.6 9.9 6.4 3.5 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Med4 PF10018.9 ORF18504 - 1.6 8.4 9.6 0.81 9.3 5.8 2.1 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 NPV_P10 PF05531.12 ORF18504 - 1.8 9.1 6.7 3.2 8.3 1.1 2.9 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF3450 PF11932.8 ORF18504 - 1.8 7.8 9.8 0.25 10.6 2.9 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) FliD_N PF02465.18 ORF18504 - 2.1 9.1 9.8 3.7 8.3 1.1 2.4 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Syntaxin-6_N PF09177.11 ORF18504 - 2.1 9.0 7.4 7.8 7.1 0.8 2.3 2 0 0 2 2 2 0 Syntaxin 6, N-terminal BST2 PF16716.5 ORF18504 - 2.2 8.9 14.3 0.26 11.9 5.1 2.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF1664 PF07889.12 ORF18504 - 2.9 7.9 6.6 1.5 8.8 2.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF18504 - 2.9 8.2 11.0 6.6 7.1 10.5 1.7 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) bZIP_1 PF00170.21 ORF18504 - 4.6 7.4 12.0 2.7 8.2 0.1 3.3 2 1 1 3 3 3 0 bZIP transcription factor Peptidase_S74 PF13884.6 ORF17054 - 1.3e-06 28.6 0.1 2.5e-06 27.7 0.1 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 ORF17054 - 0.047 13.2 1.7 0.32 10.6 0.1 2.2 2 0 0 2 2 2 0 Trimerisation motif CTD_bind PF04818.13 ORF1633 - 0.04 14.7 1.4 0.27 12.1 0.4 2.6 1 1 2 3 3 3 0 RNA polymerase II-binding domain. TCTP PF00838.17 ORF1633 - 0.055 13.8 9.7 0.032 14.6 5.9 2.1 1 1 1 2 2 2 0 Translationally controlled tumour protein DUF1298 PF06974.13 ORF16042 - 1.6e-08 34.7 0.4 2.3e-08 34.1 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) baeRF_family7 PF18849.1 ORF15969 - 0.0038 17.4 0.0 0.0067 16.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 7 zf-CSL PF05207.13 ORF15969 - 0.028 14.1 0.0 0.071 12.8 0.0 1.6 1 0 0 1 1 1 0 CSL zinc finger TP_methylase PF00590.20 ORF14319 - 2.2e-14 53.9 0.0 4.3e-14 53.0 0.0 1.5 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TMEM135_C_rich PF15982.5 ORF12445 - 0.0031 18.1 0.5 0.0031 18.1 0.5 1.6 2 0 0 2 2 2 1 N-terminal cysteine-rich region of Transmembrane protein 135 ARL2_Bind_BART PF11527.8 ORF11241 - 3.2e-25 88.5 10.1 4.9e-25 87.9 10.1 1.3 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART Fes1 PF08609.10 ORF11241 - 0.58 11.1 3.5 5.2 8.0 0.2 2.5 2 0 0 2 2 2 0 Nucleotide exchange factor Fes1 DnaJ PF00226.31 ORF109898 - 3.7e-06 27.0 0.1 7.9e-06 25.9 0.1 1.6 1 1 0 1 1 1 1 DnaJ domain HlyIII PF03006.20 ORF109475 - 0.093 12.4 6.0 0.12 12.1 6.0 1.1 1 0 0 1 1 1 0 Haemolysin-III related SPRY PF00622.28 ORF109004 - 0.02 15.0 0.0 0.028 14.5 0.0 1.2 1 0 0 1 1 1 0 SPRY domain Thioredoxin PF00085.20 ORF108363 - 0.00014 21.8 0.0 0.24 11.4 0.0 2.2 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.6 ORF108363 - 0.0058 17.1 0.0 0.032 14.7 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain MdoG PF04349.12 ORF108251 - 9.5e-55 186.4 0.0 1.1e-54 186.2 0.0 1.0 1 0 0 1 1 1 1 Periplasmic glucan biosynthesis protein, MdoG EpoR_lig-bind PF09067.10 ORF108251 - 0.0084 16.3 0.0 0.015 15.5 0.0 1.3 1 0 0 1 1 1 1 Erythropoietin receptor, ligand binding BTB PF00651.31 ORF107887 - 1.1e-17 64.3 2.6 2.6e-16 59.8 0.1 2.6 1 1 1 2 2 2 2 BTB/POZ domain BACK PF07707.15 ORF107887 - 0.0039 17.3 0.6 0.017 15.2 0.1 2.1 2 0 0 2 2 2 1 BTB And C-terminal Kelch CAC1F_C PF16885.5 ORF105097 - 9.7 5.7 14.7 12 5.5 14.7 1.0 1 0 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term DUF1295 PF06966.12 ORF104577 - 3.5e-11 43.1 0.7 5.4e-11 42.5 0.2 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF104577 - 2.9e-07 30.8 1.2 2.9e-07 30.8 1.2 2.0 2 0 0 2 2 2 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF104577 - 9.9e-05 22.4 2.8 9.9e-05 22.4 2.8 1.6 2 0 0 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF104577 - 0.00064 20.1 4.0 0.0015 18.9 0.3 2.5 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family RdDM_RDM1 PF09187.10 ORF104577 - 0.056 13.5 0.1 0.087 12.9 0.1 1.3 1 0 0 1 1 1 0 RNA-directed DNA methylation 1 CSD PF00313.22 ORF101045 - 0.17 11.8 0.0 0.39 10.6 0.0 1.7 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain SRP_SPB PF02978.19 ORF100445 - 1.7e-30 105.6 2.0 1.7e-30 105.6 2.0 3.0 2 1 0 2 2 2 1 Signal peptide binding domain DcrB PF08786.11 ORF100364 - 2.9e-30 105.0 1.6 3.9e-30 104.6 1.6 1.1 1 0 0 1 1 1 1 DcrB DUF1454 PF07305.12 ORF100364 - 0.0046 16.4 0.1 0.0057 16.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1454) PRODH PF18327.1 ORF100364 - 0.13 12.5 0.4 0.31 11.3 0.4 1.7 1 0 0 1 1 1 0 Proline utilization A proline dehydrogenase N-terminal domain ABC_membrane_2 PF06472.15 NODE_36264_length_592_cov_2.947935_g29136_i0forward_frame_1 - 2.3e-25 89.6 1.1 2.7e-25 89.3 1.1 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 SbmA_BacA PF05992.12 NODE_36264_length_592_cov_2.947935_g29136_i0forward_frame_1 - 5.7e-22 78.5 1.2 6.5e-22 78.4 1.2 1.0 1 0 0 1 1 1 1 SbmA/BacA-like family DUF3487 PF11990.8 NODE_36264_length_592_cov_2.947935_g29136_i0forward_frame_1 - 0.016 15.1 0.3 0.026 14.4 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) Rep_1 PF01446.17 NODE_36264_length_592_cov_2.947935_g29136_i0forward_frame_1 - 0.039 13.4 0.2 0.063 12.8 0.2 1.3 1 0 0 1 1 1 0 Replication protein APT PF03440.14 NODE_36264_length_592_cov_2.947935_g29136_i0forward_frame_1 - 0.056 13.4 0.0 0.19 11.7 0.0 1.8 1 1 1 2 2 2 0 Aerolysin/Pertussis toxin (APT) domain MRP-S32 PF10210.9 NODE_36264_length_592_cov_2.947935_g29136_i0forward_frame_1 - 0.11 13.1 0.9 0.16 12.5 0.9 1.2 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S32 Retro_M PF02813.14 NODE_36263_length_592_cov_2.982047_g29135_i0forward_frame_1 - 0.014 15.7 0.3 0.023 15.1 0.3 1.3 1 0 0 1 1 1 0 Retroviral M domain Autotransporter PF03797.19 NODE_36262_length_592_cov_3.150808_g29134_i0forward_frame_1 - 2.6e-32 112.5 20.9 3e-32 112.3 20.9 1.0 1 0 0 1 1 1 1 Autotransporter beta-domain DUF1663 PF07909.11 NODE_36262_length_592_cov_3.150808_g29134_i0forward_frame_1 - 0.13 10.9 0.2 0.17 10.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1663) Sulfotransfer_3 PF13469.6 NODE_36233_length_592_cov_207.617594_g29107_i0forward_frame_1 - 0.0012 19.3 0.1 0.0017 18.7 0.1 1.3 1 0 0 1 1 1 1 Sulfotransferase family NADH-G_4Fe-4S_3 PF10588.9 NODE_36218_length_593_cov_2.440860_g29094_i0forward_frame_1 - 0.26 10.9 2.0 0.47 10.0 2.0 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EF-hand_2 PF09068.11 NODE_36215_length_593_cov_2.498208_g29091_i0forward_frame_1 - 0.0032 17.6 0.3 0.0064 16.6 0.2 1.5 1 1 0 1 1 1 1 EF hand DUF1638 PF07796.11 NODE_36212_length_593_cov_2.928315_g29088_i0forward_frame_1 - 0.047 13.8 0.1 0.06 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1638) DUF1664 PF07889.12 NODE_36201_length_593_cov_73.116487_g29078_i0reverse_frame_1 - 0.12 12.4 4.2 0.29 11.2 4.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Snapin_Pallidin PF14712.6 NODE_36201_length_593_cov_73.116487_g29078_i0reverse_frame_1 - 0.32 11.4 9.8 0.12 12.8 5.7 2.1 2 0 0 2 2 2 0 Snapin/Pallidin RCC1_2 PF13540.6 NODE_36178_length_593_cov_314.643369_g7626_i2forward_frame_1 - 1e-05 25.2 10.4 0.024 14.4 1.0 3.9 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RPS31 PF17067.5 NODE_36169_length_594_cov_2.633274_g29050_i0forward_frame_1 - 0.14 12.4 0.4 0.24 11.6 0.4 1.4 1 0 0 1 1 1 0 Ribosomal protein S31e DUF3481 PF11980.8 NODE_36149_length_594_cov_116.227191_g29030_i0reverse_frame_1 - 0.91 9.3 4.1 25 4.7 0.2 3.0 3 0 0 3 3 3 0 C-terminal domain of neuropilin glycoprotein DUF1242 PF06842.12 NODE_36149_length_594_cov_116.227191_g29030_i0reverse_frame_1 - 2.7 7.9 7.3 36 4.3 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1242) Ank_2 PF12796.7 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_1 - 7.2e-19 68.2 0.0 9.9e-19 67.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_1 - 1.6e-15 57.3 0.0 3.5e-08 33.8 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_1 - 2.1e-14 53.2 0.0 2.1e-05 24.8 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_1 - 9.7e-14 51.3 0.2 2.9e-07 30.6 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_1 - 1.9e-11 43.1 0.0 7.7e-05 22.8 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat zn-ribbon_14 PF16503.5 NODE_36143_length_594_cov_157.719141_g29024_i0reverse_frame_1 - 0.00029 20.3 4.7 0.061 12.8 0.4 2.3 2 0 0 2 2 2 2 Zinc-ribbon Dsh_C PF12316.8 NODE_36143_length_594_cov_157.719141_g29024_i0reverse_frame_1 - 0.013 15.9 2.9 0.25 11.7 0.4 2.2 2 0 0 2 2 2 0 Segment polarity protein dishevelled (Dsh) C terminal Ig_C19orf38 PF17737.1 NODE_36143_length_594_cov_157.719141_g29024_i0reverse_frame_1 - 0.097 13.0 0.0 15 6.0 0.0 2.2 2 0 0 2 2 2 0 Ig domain in C19orf38 (HIDE1) S1 PF00575.23 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 3.7e-41 139.3 6.3 5.8e-21 74.6 0.7 2.1 2 0 0 2 2 2 2 S1 RNA binding domain DUF1344 PF07076.11 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.00027 20.8 2.9 0.1 12.6 0.2 3.9 3 1 0 3 3 3 1 Protein of unknown function (DUF1344) S1_2 PF13509.6 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.025 14.6 0.4 3 8.0 0.1 3.0 2 2 0 2 2 2 0 S1 domain PCB_OB PF17092.5 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.028 15.2 4.8 0.7 10.7 0.4 3.4 1 1 3 4 4 4 0 Penicillin-binding protein OB-like domain BPL_C PF02237.17 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.04 13.8 5.0 11 6.1 0.0 3.5 3 0 0 3 3 3 0 Biotin protein ligase C terminal domain CusF_Ec PF11604.8 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.16 12.0 3.7 15 5.7 0.4 4.0 2 1 1 3 3 3 0 Copper binding periplasmic protein CusF RNA_pol_Rbc25 PF08292.12 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 3.6 7.8 5.0 52 4.1 0.0 3.2 3 1 0 3 3 3 0 RNA polymerase III subunit Rpc25 Sina PF03145.16 NODE_36122_length_595_cov_7.450000_g29007_i0reverse_frame_2 - 5e-05 23.3 2.0 8.2e-05 22.6 2.0 1.4 1 0 0 1 1 1 1 Seven in absentia protein family zf-TRAF_2 PF15965.5 NODE_36122_length_595_cov_7.450000_g29007_i0reverse_frame_2 - 0.00062 20.2 7.6 0.003 18.0 3.7 2.6 1 1 1 2 2 2 1 TRAF-like zinc-finger zf-TRAF PF02176.18 NODE_36122_length_595_cov_7.450000_g29007_i0reverse_frame_2 - 0.087 13.5 8.0 0.22 12.2 1.1 2.8 2 1 1 3 3 3 0 TRAF-type zinc finger zf-C3HC4_2 PF13923.6 NODE_36122_length_595_cov_7.450000_g29007_i0reverse_frame_2 - 3.1 7.7 10.7 0.21 11.4 1.1 2.9 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) DUF1375 PF07119.12 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_2 - 3.6e-07 30.5 5.9 1 9.8 0.1 4.2 2 1 2 4 4 4 4 Protein of unknown function (DUF1375) Fucose_iso_N1 PF07881.12 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_2 - 0.0057 16.5 0.0 3.8 7.3 0.0 2.1 2 0 0 2 2 2 2 L-fucose isomerase, first N-terminal domain TnpW PF14202.6 NODE_36096_length_595_cov_462.928571_g28983_i0forward_frame_3 - 0.029 14.2 0.0 60 3.6 0.0 3.3 3 0 0 3 3 3 0 Transposon-encoded protein TnpW MyTH4 PF00784.17 NODE_36096_length_595_cov_462.928571_g28983_i0forward_frame_3 - 1.2 9.6 5.0 43 4.7 0.1 3.4 2 2 2 4 4 4 0 MyTH4 domain NERD PF08378.11 NODE_36089_length_595_cov_1427.094643_g28977_i0reverse_frame_3 - 0.0066 16.9 1.3 0.014 15.8 1.3 1.6 1 0 0 1 1 1 1 Nuclease-related domain POLO_box PF00659.18 NODE_36082_length_596_cov_2.172906_g28971_i0reverse_frame_3 - 2.2e-08 34.2 0.1 4.4e-08 33.2 0.1 1.5 1 0 0 1 1 1 1 POLO box duplicated region POLO_box PF00659.18 NODE_36082_length_596_cov_2.172906_g28971_i0reverse_frame_2 - 2.6e-17 62.7 0.3 4.9e-17 61.9 0.3 1.5 1 0 0 1 1 1 1 POLO box duplicated region LPAM_1 PF08139.12 NODE_36078_length_596_cov_2.737968_g28967_i0forward_frame_3 - 0.37 11.4 2.7 1 10.0 2.7 1.8 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks101.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks101.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks101.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks101.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Exostosin PF03016.15 NODE_36060_length_596_cov_91.019608_g28949_i0reverse_frame_3 - 3.4e-09 36.3 0.0 5.3e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 Exostosin family Exostosin PF03016.15 NODE_36060_length_596_cov_91.019608_g28949_i0reverse_frame_2 - 1.2e-05 24.7 0.0 1.5e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Exostosin family amfpi-1 PF12190.8 NODE_36060_length_596_cov_91.019608_g28949_i0forward_frame_2 - 0.089 13.4 0.6 0.21 12.2 0.6 1.7 1 1 0 1 1 1 0 Fungal protease inhibitor KBP_C PF12309.8 NODE_36042_length_596_cov_186.716578_g28931_i0reverse_frame_3 - 4.1e-26 92.4 3.1 5.1e-26 92.1 3.1 1.0 1 0 0 1 1 1 1 KIF-1 binding protein C terminal Clr5 PF14420.6 NODE_36042_length_596_cov_186.716578_g28931_i0reverse_frame_3 - 0.0074 16.5 0.5 0.061 13.6 0.1 2.3 2 0 0 2 2 2 1 Clr5 domain MAGUK_N_PEST PF10608.9 NODE_36040_length_596_cov_199.272727_g28929_i0reverse_frame_2 - 0.67 10.4 3.8 0.11 12.9 0.5 1.6 2 0 0 2 2 2 0 Polyubiquitination (PEST) N-terminal domain of MAGUK Tai4 PF16695.5 NODE_36034_length_596_cov_403.467023_g28923_i0reverse_frame_3 - 0.012 16.1 0.0 24 5.5 0.0 3.6 4 0 0 4 4 4 0 Type VI secretion system (T6SS), amidase immunity protein Peptidase_S3 PF00944.19 NODE_36034_length_596_cov_403.467023_g28923_i0reverse_frame_2 - 0.081 12.7 0.8 0.14 12.0 0.8 1.3 1 0 0 1 1 1 0 Alphavirus core protein DUF1053 PF06327.14 NODE_36034_length_596_cov_403.467023_g28923_i0forward_frame_2 - 0.27 11.8 0.0 21 5.7 0.0 3.2 4 0 0 4 4 4 0 Domain of Unknown Function (DUF1053) CTD_bind PF04818.13 NODE_36011_length_597_cov_93.362989_g28904_i0reverse_frame_2 - 9.2e-06 26.4 0.1 2.6e-05 24.9 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase II-binding domain. Herpes_UL56 PF04534.12 NODE_35996_length_597_cov_386.069395_g28892_i0forward_frame_3 - 5.7 6.4 13.4 2 7.9 10.9 1.5 1 1 0 1 1 1 0 Herpesvirus UL56 protein DUF4633 PF15464.6 NODE_35996_length_597_cov_386.069395_g28892_i0forward_frame_2 - 0.25 11.5 5.1 0.15 12.2 1.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4633) COX8 PF02285.15 NODE_35992_length_597_cov_768.886121_g28888_i0forward_frame_3 - 1.3 9.0 36.4 5.1 7.1 0.5 8.1 4 2 2 7 7 7 0 Cytochrome oxidase c subunit VIII DUF1700 PF08006.11 NODE_35992_length_597_cov_768.886121_g28888_i0forward_frame_3 - 7.2 6.1 19.3 5.2 6.6 1.1 4.1 1 1 4 5 5 5 0 Protein of unknown function (DUF1700) DSPc PF00782.20 ORF96106 - 1.6e-29 102.4 0.2 2.3e-29 101.9 0.2 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF96106 - 0.00016 21.3 0.0 0.00018 21.2 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Init_tRNA_PT PF04179.12 ORF96106 - 0.011 16.1 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 0 Rit1 DUSP-like domain PTPlike_phytase PF14566.6 ORF96106 - 0.022 14.9 0.1 0.031 14.4 0.1 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate CDKN3 PF05706.12 ORF96106 - 0.1 12.3 0.0 0.31 10.7 0.0 1.6 1 1 0 2 2 2 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Homeobox_KN PF05920.11 ORF95496 - 1.8e-16 59.7 0.3 1.8e-16 59.7 0.3 2.7 2 1 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF95496 - 1.6e-09 37.4 2.0 6.2e-09 35.6 0.2 2.4 2 0 0 2 2 2 1 Homeodomain ERGIC_N PF13850.6 ORF95424 - 0.064 13.6 0.1 0.11 12.9 0.1 1.4 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4112 PF13430.6 ORF95279 - 0.015 15.5 0.0 0.022 15.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4112) TRAM PF01938.20 ORF94323 - 7.2e-22 77.2 0.1 1.6e-21 76.1 0.1 1.6 1 0 0 1 1 1 1 TRAM domain Radical_SAM PF04055.21 ORF94323 - 4e-06 27.3 0.0 8.6e-06 26.2 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily TRAM_2 PF18693.1 ORF94323 - 0.00053 20.1 0.2 0.0027 17.8 0.2 2.1 1 1 0 1 1 1 1 TRAM domain ABC_tran PF00005.27 ORF9287 - 4.6e-10 40.2 0.0 2e-09 38.1 0.0 1.9 2 0 0 2 2 2 1 ABC transporter NB-ARC PF00931.22 ORF9287 - 0.0024 17.1 0.0 0.0034 16.6 0.0 1.2 1 0 0 1 1 1 1 NB-ARC domain AAA_29 PF13555.6 ORF9287 - 0.0027 17.4 0.1 0.0053 16.5 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF9287 - 0.0032 17.8 0.0 0.0052 17.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF9287 - 0.0045 16.9 0.1 0.0073 16.2 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase RuvB_N PF05496.12 ORF9287 - 0.0048 16.7 0.0 0.007 16.1 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TsaE PF02367.17 ORF9287 - 0.0055 16.7 0.0 0.0091 16.0 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 ORF9287 - 0.0068 15.5 0.0 0.0079 15.3 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein cobW PF02492.19 ORF9287 - 0.0069 16.0 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_21 PF13304.6 ORF9287 - 0.011 15.5 0.2 0.022 14.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 ORF9287 - 0.013 16.0 0.0 0.024 15.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF9287 - 0.014 15.9 1.3 0.018 15.6 0.5 1.6 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 ORF9287 - 0.015 15.7 0.0 0.025 15.0 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 ORF9287 - 0.017 15.0 0.0 0.023 14.6 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 ORF9287 - 0.024 14.6 0.0 0.033 14.1 0.0 1.2 1 0 0 1 1 1 0 NACHT domain AAA_19 PF13245.6 ORF9287 - 0.024 15.0 0.0 0.04 14.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 ORF9287 - 0.035 13.9 0.0 0.048 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 ORF9287 - 0.058 13.3 0.1 0.096 12.6 0.1 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ResIII PF04851.15 ORF9287 - 0.058 13.4 0.0 0.067 13.2 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_16 PF13191.6 ORF9287 - 0.06 13.7 0.0 0.085 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain SMC_N PF02463.19 ORF9287 - 0.066 12.6 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain GTP_EFTU PF00009.27 ORF9287 - 0.078 12.5 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain dNK PF01712.19 ORF9287 - 0.11 12.4 1.2 0.17 11.7 0.2 1.7 2 0 0 2 2 2 0 Deoxynucleoside kinase IstB_IS21 PF01695.17 ORF9287 - 0.14 11.9 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_33 PF13671.6 ORF9287 - 0.2 11.8 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain EamA PF00892.20 ORF92385 - 1.5e-07 31.7 11.5 1.5e-07 31.7 11.5 1.5 2 0 0 2 2 2 1 EamA-like transporter family Sugar_transport PF06800.12 ORF92385 - 0.00041 19.8 6.2 0.00051 19.5 6.2 1.3 1 0 0 1 1 1 1 Sugar transport protein Lipase_GDSL_2 PF13472.6 ORF92096 - 2e-06 28.3 0.0 2.6e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family GvpG PF05120.12 ORF91103 - 0.093 12.8 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Gas vesicle protein G SRA1 PF07304.11 ORF91103 - 0.099 12.4 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) Peptidase_S74 PF13884.6 ORF90603 - 1.2e-06 28.8 0.1 2.4e-06 27.7 0.1 1.5 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 ORF90603 - 0.39 10.3 1.7 2.4 7.8 0.0 2.2 2 0 0 2 2 2 0 Trimerisation motif EMP24_GP25L PF01105.24 ORF90343 - 2.9e-21 76.2 1.1 3.3e-21 76.0 1.1 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Snapin_Pallidin PF14712.6 ORF90343 - 0.054 13.9 0.7 0.099 13.1 0.7 1.4 1 0 0 1 1 1 0 Snapin/Pallidin BRE1 PF08647.11 ORF90343 - 0.074 13.1 2.4 0.11 12.5 2.4 1.3 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase DUF4140 PF13600.6 ORF90343 - 0.12 12.9 0.2 0.2 12.1 0.2 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Claudin_2 PF13903.6 ORF90343 - 0.14 11.9 0.5 1.1 9.0 0.5 1.9 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction Orf78 PF06024.12 ORF90343 - 0.29 11.5 2.2 0.44 10.9 2.2 1.4 1 1 0 1 1 1 0 Orf78 (ac78) TssO PF17561.2 ORF90343 - 8.4 6.5 12.2 14 5.8 0.8 2.4 1 1 1 2 2 2 0 Type VI secretion system, TssO MORN PF02493.20 ORF88932 - 2.7e-05 23.8 3.2 0.0001 21.9 0.0 3.0 3 1 0 3 3 3 1 MORN repeat TRP PF06011.12 ORF88094 - 0.0019 17.0 2.3 0.0023 16.7 2.3 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Oxidored_q3 PF00499.20 ORF88094 - 0.0059 16.3 3.9 0.0081 15.9 0.3 2.1 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF4149 PF13664.6 ORF88094 - 0.029 14.7 3.2 0.069 13.5 3.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4149) DHHC PF01529.20 ORF88094 - 0.033 14.3 10.4 0.044 13.9 4.5 2.1 1 1 2 3 3 3 0 DHHC palmitoyltransferase MgtE PF01769.16 ORF88094 - 0.068 13.5 3.6 0.28 11.6 3.6 1.9 1 1 0 1 1 1 0 Divalent cation transporter DUF5305 PF17231.2 ORF88094 - 0.13 11.7 3.5 0.54 9.6 0.0 2.4 1 1 2 3 3 3 0 Family of unknown function (DUF5305) EphA2_TM PF14575.6 ORF88094 - 0.14 13.0 1.4 14 6.7 0.1 2.9 2 1 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain PMP1_2 PF08114.11 ORF88094 - 0.17 11.7 1.6 0.18 11.6 0.0 1.8 2 0 0 2 2 2 0 ATPase proteolipid family SIT PF15330.6 ORF88094 - 0.19 12.2 1.3 4.9 7.6 0.1 2.7 3 0 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT DUF4500 PF14937.6 ORF88094 - 0.2 11.7 9.5 0.99 9.5 0.6 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4500) ERGIC_N PF13850.6 ORF88094 - 0.22 11.9 5.2 2.3 8.6 0.2 2.6 1 1 1 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Phtf-FEM1B_bdg PF12129.8 ORF88094 - 0.46 10.3 4.5 15 5.4 4.5 2.1 1 1 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor Ferric_reduct PF01794.19 ORF88094 - 1.3 9.2 7.1 10 6.3 7.1 2.1 1 1 0 1 1 1 0 Ferric reductase like transmembrane component PDR_CDR PF06422.12 ORF88094 - 3.4 7.7 11.5 0.7 9.8 0.4 3.2 1 1 2 3 3 3 0 CDR ABC transporter Sel_put PF04328.13 ORF83579 - 2.5 8.2 14.8 1.7 8.7 2.0 3.3 3 0 0 3 3 3 0 Selenoprotein, putative Iron_transport PF10634.9 ORF82708 - 0.064 13.4 0.2 0.099 12.8 0.2 1.4 1 0 0 1 1 1 0 Fe2+ transport protein NMO PF03060.15 ORF82708 - 0.082 12.3 0.4 0.11 11.9 0.4 1.1 1 0 0 1 1 1 0 Nitronate monooxygenase Xlink PF00193.17 ORF82500 - 0.75 10.2 3.6 0.32 11.4 0.4 2.0 2 1 1 3 3 3 0 Extracellular link domain Neur_chan_memb PF02932.16 ORF82500 - 0.81 9.7 12.0 1.1 9.3 12.0 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region YpjP PF14005.6 ORF82500 - 4.4 7.3 10.4 5.9 6.9 8.9 2.0 2 1 0 2 2 2 0 YpjP-like protein Borrelia_P83 PF05262.11 ORF82500 - 5.4 5.4 36.1 6.9 5.0 36.1 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein PQQ PF01011.21 ORF80693 - 0.00011 22.0 0.1 0.013 15.4 0.0 2.9 3 0 0 3 3 3 1 PQQ enzyme repeat PQQ_3 PF13570.6 ORF80693 - 0.00045 20.6 0.5 0.76 10.3 0.0 3.7 4 0 0 4 4 4 1 PQQ-like domain PQQ_2 PF13360.6 ORF80693 - 0.011 15.3 0.0 0.063 12.8 0.0 2.0 1 1 0 1 1 1 0 PQQ-like domain DUF5508 PF17621.2 ORF80693 - 0.017 14.3 0.0 0.026 13.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5508) META PF03724.16 ORF7783 - 9.1e-06 25.6 0.0 1.5e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 META domain SPRY PF00622.28 ORF7783 - 0.098 12.8 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 SPRY domain zf-PARP PF00645.18 ORF77758 - 9.8e-12 45.6 0.0 1.7e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region Ribosomal_L13 PF00572.18 ORF77657 - 3.3e-11 43.5 0.1 8.1e-10 39.0 0.0 2.6 2 1 0 2 2 2 1 Ribosomal protein L13 DUF515 PF04415.12 ORF753 - 0.022 13.2 1.5 0.025 13.0 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) MORN PF02493.20 ORF70887 - 6.4e-30 101.3 37.7 6.9e-06 25.7 0.1 8.3 8 0 0 8 8 8 8 MORN repeat EamA PF00892.20 ORF7081 - 1.5e-07 31.7 11.5 1.5e-07 31.7 11.5 1.5 2 0 0 2 2 2 1 EamA-like transporter family Sugar_transport PF06800.12 ORF7081 - 0.00041 19.8 6.2 0.00051 19.5 6.2 1.3 1 0 0 1 1 1 1 Sugar transport protein Cyclin PF08613.11 ORF70076 - 6.7e-33 114.3 0.1 8.3e-33 114.0 0.1 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF70076 - 3.5e-11 43.0 0.1 4.9e-11 42.5 0.1 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain Rft-1 PF04506.13 ORF69749 - 5.5e-21 74.9 0.5 5.8e-21 74.8 0.5 1.0 1 0 0 1 1 1 1 Rft protein Polysacc_synt_C PF14667.6 ORF69749 - 0.0042 17.2 7.9 0.0071 16.4 7.9 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain LRR_4 PF12799.7 ORF69711 - 0.082 13.4 5.2 0.42 11.1 1.9 3.0 2 1 1 3 3 3 0 Leucine Rich repeats (2 copies) zf-Di19 PF05605.12 ORF69149 - 0.0094 16.2 2.0 0.022 15.0 2.0 1.6 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding Orthoreo_P17 PF07272.11 ORF69149 - 0.098 12.7 1.2 0.14 12.2 1.2 1.2 1 0 0 1 1 1 0 Orthoreovirus P17 protein YyzF PF14116.6 ORF69149 - 0.14 12.2 0.6 0.72 9.9 0.0 2.2 2 0 0 2 2 2 0 YyzF-like protein zinc_ribbon_2 PF13240.6 ORF69149 - 0.18 11.6 0.1 0.18 11.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF69149 - 0.22 11.0 0.2 0.22 11.0 0.2 2.7 3 0 0 3 3 3 0 zinc-ribbon domain zf-CHCC PF10276.9 ORF69149 - 0.59 10.2 6.1 0.89 9.7 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger domain EamA PF00892.20 ORF68674 - 1.5e-07 31.7 11.5 1.5e-07 31.7 11.5 1.5 2 0 0 2 2 2 1 EamA-like transporter family Sugar_transport PF06800.12 ORF68674 - 0.00041 19.8 6.2 0.00051 19.5 6.2 1.3 1 0 0 1 1 1 1 Sugar transport protein rve PF00665.26 ORF67797 - 3.9e-12 46.4 0.1 5.7e-12 45.9 0.1 1.2 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.6 ORF67797 - 1.6e-05 24.9 0.7 3.3e-05 23.9 0.7 1.4 1 0 0 1 1 1 1 HTH-like domain EF-hand_1 PF00036.32 ORF67163 - 6e-27 91.2 12.2 4.1e-07 29.1 0.2 4.4 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF67163 - 2.4e-23 82.3 11.3 1.3e-11 44.8 0.8 2.6 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF67163 - 1.5e-22 77.6 7.4 1.3e-06 27.8 0.1 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF67163 - 3.7e-20 70.5 10.2 9e-06 25.0 1.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF67163 - 2.9e-13 49.4 12.8 0.00022 21.0 0.3 4.4 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF67163 - 9.4e-11 42.0 2.7 2.5e-06 27.8 0.4 2.2 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF67163 - 0.0026 17.7 3.7 0.22 11.5 0.2 2.8 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF67163 - 0.072 13.4 0.0 2.5 8.5 0.0 2.6 2 1 0 2 2 2 0 EF-hand domain Caleosin PF05042.13 ORF67163 - 0.072 13.0 2.6 3.6 7.5 0.2 3.2 1 1 2 3 3 3 0 Caleosin related protein DUF4284 PF14112.6 ORF67163 - 0.12 13.3 3.1 0.13 13.2 1.6 1.7 1 1 1 2 2 2 0 Immunity protein 22 DUF4903 PF16246.5 ORF64576 - 0.062 12.9 3.8 0.072 12.7 0.8 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4903) Aldo_ket_red PF00248.21 ORF64130 - 2.8e-31 108.8 0.1 4.1e-31 108.3 0.1 1.3 1 1 0 1 1 1 1 Aldo/keto reductase family MBG PF17883.1 ORF64130 - 0.0005 20.6 0.1 0.00076 20.0 0.1 1.3 1 0 0 1 1 1 1 MBG domain TetR_N PF00440.23 ORF63578 - 3.2e-09 36.4 0.0 5.5e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 ORF63578 - 0.02 15.6 0.8 0.26 12.0 0.1 2.5 1 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TetR_C_16 PF17920.1 ORF63578 - 0.054 13.7 1.0 1 9.6 0.0 2.8 3 1 1 4 4 4 0 Tetracyclin repressor-like, C-terminal domain DUF390 PF04094.14 ORF63578 - 0.07 11.4 0.3 0.064 11.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) TetR_C_24 PF17932.1 ORF63578 - 0.1 12.9 0.8 0.14 12.4 0.1 1.5 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain MtrH PF02007.18 ORF63578 - 0.26 10.3 0.0 0.34 10.0 0.0 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase MtrH subunit Sulfotransfer_1 PF00685.27 ORF61143 - 0.00018 21.1 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 Sulfotransferase domain DUF3187 PF11383.8 ORF61143 - 0.0028 16.9 0.2 0.0038 16.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3187) PAF-AH_p_II PF03403.13 ORF61137 - 6.9e-12 44.6 0.4 9.8e-12 44.1 0.4 1.2 1 0 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II Asp PF00026.23 ORF59268 - 0.00019 21.0 0.0 0.00024 20.6 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF59268 - 0.0093 15.8 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal CS PF04969.16 ORF58691 - 1.6e-07 32.2 0.1 3e-07 31.4 0.1 1.4 1 0 0 1 1 1 1 CS domain RRM_3 PF08777.11 ORF58691 - 0.12 12.4 0.9 0.32 11.1 0.4 1.9 2 0 0 2 2 2 0 RNA binding motif DUF4407 PF14362.6 ORF57981 - 4.3 6.6 5.5 9.5 5.5 5.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF515 PF04415.12 ORF57269 - 0.022 13.2 1.5 0.025 13.0 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) POLO_box PF00659.18 ORF56068 - 2.8e-10 40.2 2.0 6.1e-10 39.2 0.6 2.2 2 0 0 2 2 2 1 POLO box duplicated region Pkinase PF00069.25 ORF56068 - 4.5e-09 36.1 0.0 6.4e-09 35.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain adh_short PF00106.25 ORF5556 - 1.1e-16 60.8 0.1 1.5e-16 60.5 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF5556 - 2.7e-11 43.5 0.0 3.4e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase CreA PF05981.12 ORF55033 - 9e-30 103.3 0.0 1.1e-29 103.1 0.0 1.2 1 0 0 1 1 1 1 CreA protein Ribosomal_L13 PF00572.18 ORF53765 - 3.8e-11 43.3 0.1 8.1e-10 39.0 0.0 2.5 2 1 0 2 2 2 1 Ribosomal protein L13 Abhydrolase_2 PF02230.16 ORF5308 - 6.7e-15 55.5 0.0 1e-14 54.9 0.0 1.3 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.21 ORF5308 - 4.4e-08 32.8 0.0 0.0049 16.4 0.0 2.1 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_3 PF07859.13 ORF5308 - 7.8e-06 25.9 0.0 4.9e-05 23.3 0.0 1.9 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF5308 - 0.00017 20.9 0.0 0.0098 15.2 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 DLH PF01738.18 ORF5308 - 0.00022 20.8 0.0 0.00039 20.1 0.0 1.3 1 1 0 1 1 1 1 Dienelactone hydrolase family Esterase PF00756.20 ORF5308 - 0.00031 20.5 0.0 0.00043 20.0 0.0 1.1 1 0 0 1 1 1 1 Putative esterase Esterase_phd PF10503.9 ORF5308 - 0.0036 16.8 0.0 0.005 16.3 0.0 1.2 1 0 0 1 1 1 1 Esterase PHB depolymerase Abhydrolase_6 PF12697.7 ORF5308 - 0.006 17.2 2.4 0.012 16.2 1.5 1.6 1 1 1 2 2 2 1 Alpha/beta hydrolase family DUF2048 PF09752.9 ORF5308 - 0.0066 15.6 0.2 0.0084 15.2 0.2 1.1 1 0 0 1 1 1 1 Abhydrolase domain containing 18 PGAP1 PF07819.13 ORF5308 - 0.01 15.6 0.0 0.015 15.1 0.0 1.1 1 0 0 1 1 1 0 PGAP1-like protein Abhydrolase_1 PF00561.20 ORF5308 - 0.016 14.8 0.1 0.049 13.3 0.1 1.6 1 1 1 2 2 2 0 alpha/beta hydrolase fold Lipase_3 PF01764.25 ORF5308 - 0.093 12.6 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) GA-like PF17573.2 ORF52485 - 0.14 12.1 1.1 0.22 11.4 1.1 1.3 1 0 0 1 1 1 0 GA-like domain MMR_HSR1 PF01926.23 ORF50563 - 3.1e-20 72.4 0.0 4.8e-20 71.7 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF50563 - 1.2e-08 35.0 0.3 0.00077 19.4 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 ORF50563 - 5.1e-06 26.1 0.0 7.3e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF50563 - 9.2e-05 22.6 0.1 0.13 12.3 0.1 2.4 1 1 1 2 2 2 2 Dynamin family GTP_EFTU PF00009.27 ORF50563 - 0.00065 19.3 0.6 0.009 15.6 0.3 2.2 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain FtsK_SpoIIIE PF01580.18 ORF50563 - 0.0069 15.8 0.0 0.008 15.6 0.0 1.1 1 0 0 1 1 1 1 FtsK/SpoIIIE family SRPRB PF09439.10 ORF50563 - 0.02 14.3 0.0 0.052 13.0 0.0 1.7 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Arf PF00025.21 ORF50563 - 0.047 13.1 0.5 1.5 8.3 0.3 2.0 2 0 0 2 2 2 0 ADP-ribosylation factor family Septin PF00735.18 ORF50563 - 0.059 12.6 0.1 3.9 6.7 0.0 2.2 2 0 0 2 2 2 0 Septin PGM_PMM_I PF02878.16 ORF50563 - 0.14 11.9 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ATP-gua_Ptrans PF00217.19 ORF49831 - 3.4e-25 88.8 0.0 4.3e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 ATP:guanido phosphotransferase, C-terminal catalytic domain GvpG PF05120.12 ORF49050 - 0.093 12.8 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Gas vesicle protein G SRA1 PF07304.11 ORF49050 - 0.099 12.4 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) adh_short PF00106.25 ORF46011 - 2.4e-54 183.8 0.1 2.9e-54 183.5 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF46011 - 2.3e-40 138.6 0.0 3e-40 138.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF46011 - 2.4e-05 24.3 0.1 3.6e-05 23.8 0.1 1.3 1 0 0 1 1 1 1 KR domain SPECT1 PF18680.1 ORF39931 - 0.0024 17.6 2.8 0.0034 17.1 2.8 1.4 1 0 0 1 1 1 1 Plasmodium host cell traversal SPECT1 Utp11 PF03998.13 ORF39931 - 0.34 10.8 6.1 1.1 9.2 6.1 1.7 1 1 0 1 1 1 0 Utp11 protein S_4TM PF18159.1 ORF38755 - 0.093 12.0 0.4 0.13 11.5 0.4 1.2 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain TPR_12 PF13424.6 ORF35665 - 2.6e-10 40.5 0.1 3.8e-10 39.9 0.1 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF35665 - 2.3e-05 24.1 0.2 0.00012 21.8 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF35665 - 0.00038 21.0 2.0 0.004 17.9 0.1 2.7 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF35665 - 0.00038 20.4 1.1 0.0066 16.5 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF35665 - 0.02 14.7 0.0 0.071 13.0 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF35665 - 0.021 15.0 0.1 0.083 13.1 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF35665 - 0.027 15.0 0.1 0.11 13.1 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat PPR PF01535.20 ORF35665 - 0.033 14.4 1.4 1.8 9.0 0.0 3.1 3 0 0 3 3 3 0 PPR repeat TPR_16 PF13432.6 ORF35665 - 0.033 14.8 0.3 0.47 11.1 0.1 2.5 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF35665 - 0.16 12.7 1.1 0.55 11.0 0.0 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat AAA_33 PF13671.6 ORF35587 - 2.5e-12 47.2 0.3 1.2e-11 44.9 0.3 1.9 1 1 1 2 2 2 1 AAA domain UBA PF00627.31 ORF35587 - 0.00054 19.8 2.2 0.0011 18.8 0.2 2.5 3 0 0 3 3 3 1 UBA/TS-N domain Usp PF00582.26 ORF33589 - 2.2e-09 37.9 0.0 2.4e-05 24.8 0.0 2.3 2 0 0 2 2 2 2 Universal stress protein family DUF2016 PF09436.10 ORF33589 - 0.12 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) OTU PF02338.19 ORF30564 - 3.3e-10 40.5 0.0 4.8e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF30564 - 0.0024 17.4 0.0 1.1 8.7 0.0 2.2 2 0 0 2 2 2 2 Peptidase C65 Otubain Bestrophin PF01062.21 ORF29841 - 1.3e-10 41.2 0.1 1.9e-10 40.6 0.1 1.3 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel ETF PF01012.21 ORF28474 - 3.6e-33 115.0 0.1 4e-33 114.8 0.1 1.0 1 0 0 1 1 1 1 Electron transfer flavoprotein domain DUF572 PF04502.13 ORF27216 - 6.8e-05 22.6 5.3 8.6e-05 22.3 5.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) DUF5563 PF17718.1 ORF27216 - 0.027 14.0 4.5 0.15 11.6 4.5 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5563) BAF1_ABF1 PF04684.13 ORF27216 - 0.1 11.6 3.5 0.12 11.4 3.5 1.1 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor EF-hand_6 PF13405.6 ORF24382 - 0.0003 20.5 0.1 0.05 13.5 0.1 2.7 2 1 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF24382 - 0.004 16.6 0.7 0.017 14.6 0.1 2.3 3 0 0 3 3 3 1 EF hand CCP_MauG PF03150.14 ORF24382 - 0.021 15.5 0.0 0.024 15.3 0.0 1.2 1 0 0 1 1 1 0 Di-haem cytochrome c peroxidase EF-hand_8 PF13833.6 ORF24382 - 0.026 14.4 0.1 0.054 13.4 0.1 1.5 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_7 PF13499.6 ORF24382 - 0.048 14.1 0.0 0.1 13.1 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF24382 - 0.058 12.9 1.5 0.25 10.9 0.2 2.5 2 0 0 2 2 2 0 EF hand ICE2 PF08426.10 ORF24382 - 0.068 12.3 0.1 0.075 12.1 0.1 1.1 1 0 0 1 1 1 0 ICE2 SHOCT PF09851.9 ORF24382 - 0.96 9.3 4.4 1.6 8.6 1.2 2.5 2 1 0 2 2 2 0 Short C-terminal domain RCC1_2 PF13540.6 ORF2376 - 0.0035 17.1 3.9 2.1 8.2 0.0 3.4 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF2376 - 0.032 14.6 0.5 8 6.9 0.0 2.7 2 1 1 3 3 3 0 TFIIH p62 subunit, N-terminal domain DUF2664 PF10867.8 ORF2376 - 0.13 12.7 1.4 12 6.4 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2664) Inhibitor_I36 PF03995.13 ORF2376 - 0.18 11.8 0.7 1 9.3 0.0 2.5 2 2 0 2 2 2 0 Peptidase inhibitor family I36 adh_short PF00106.25 ORF2328 - 0.14 11.6 0.0 0.22 11.0 0.0 1.2 1 0 0 1 1 1 0 short chain dehydrogenase DUF515 PF04415.12 ORF21550 - 0.022 13.2 1.5 0.025 13.0 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) ABC_tran PF00005.27 ORF19491 - 1.7e-35 122.5 0.0 2.3e-35 122.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF19491 - 1.3e-06 28.4 0.0 0.0058 16.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF19491 - 0.00054 19.6 0.1 0.0013 18.4 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF19491 - 0.0017 18.8 0.0 0.0022 18.4 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF19491 - 0.0021 18.0 0.0 0.0038 17.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 ORF19491 - 0.017 14.7 0.1 0.52 9.8 0.0 2.4 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 ORF19491 - 0.035 14.2 0.0 0.039 14.0 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF19491 - 0.047 14.2 0.5 0.074 13.6 0.5 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF19491 - 0.06 13.6 0.3 0.15 12.3 0.1 1.7 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF19491 - 0.091 12.9 0.1 0.38 10.9 0.1 1.8 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 ORF19491 - 0.1 12.5 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 NTPase AAA_30 PF13604.6 ORF19491 - 0.11 12.2 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain Cuticle_2 PF08184.11 ORF17628 - 0.0041 17.1 0.4 1.2 9.2 0.0 2.4 2 0 0 2 2 2 2 Cuticle protein 7 isoform family ATP-sulfurylase PF01747.17 ORF17628 - 0.056 12.9 0.0 0.087 12.3 0.0 1.2 1 0 0 1 1 1 0 ATP-sulfurylase OCRE PF17780.1 ORF17628 - 5.1 7.2 9.5 13 5.9 0.9 2.3 2 0 0 2 2 2 0 OCRE domain GvpG PF05120.12 ORF15907 - 0.093 12.8 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Gas vesicle protein G SRA1 PF07304.11 ORF15907 - 0.099 12.4 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) DUF515 PF04415.12 ORF14871 - 0.022 13.2 1.5 0.025 13.0 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Mlf1IP PF10248.9 ORF14655 - 0.18 11.8 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 Myelodysplasia-myeloid leukemia factor 1-interacting protein CDKN3 PF05706.12 ORF12173 - 2.4e-06 27.3 0.0 3.4e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase PF00102.27 ORF12173 - 0.048 13.2 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase DSPc PF00782.20 ORF12173 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain DUF515 PF04415.12 ORF12145 - 0.022 13.2 1.5 0.025 13.0 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) POLO_box PF00659.18 ORF119 - 2.8e-10 40.2 2.0 6.1e-10 39.2 0.6 2.2 2 0 0 2 2 2 1 POLO box duplicated region Pkinase PF00069.25 ORF119 - 4.5e-09 36.1 0.0 6.4e-09 35.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Trypan_PARP PF05887.11 ORF112391 - 0.012 15.6 67.1 0.11 12.4 37.0 2.1 1 1 1 2 2 2 0 Procyclic acidic repetitive protein (PARP) TonB_N PF16031.5 ORF112391 - 1 9.9 52.3 5 7.7 52.3 1.8 1 1 0 1 1 1 0 TonB polyproline region TMF_TATA_bd PF12325.8 ORF112268 - 0.0041 17.3 4.0 0.0041 17.3 4.0 2.3 1 1 1 2 2 2 1 TATA element modulatory factor 1 TATA binding CLZ PF16526.5 ORF112268 - 0.011 16.1 7.5 0.59 10.5 0.7 3.8 2 2 2 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Spc7 PF08317.11 ORF112268 - 0.016 14.1 10.3 0.19 10.6 8.4 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein FlaC_arch PF05377.11 ORF112268 - 0.023 15.1 9.3 0.65 10.4 0.0 3.9 2 1 2 4 4 4 0 Flagella accessory protein C (FlaC) DUF4763 PF15960.5 ORF112268 - 0.036 13.4 7.7 0.068 12.5 7.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4763) Tape_meas_lam_C PF09718.10 ORF112268 - 0.055 13.6 0.0 0.22 11.7 0.0 2.0 2 0 0 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) DUF4509 PF14970.6 ORF112268 - 0.066 13.1 6.8 0.029 14.3 4.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4509) DUF763 PF05559.11 ORF112268 - 0.071 12.3 3.9 0.11 11.7 3.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF763) BLOC1_2 PF10046.9 ORF112268 - 0.12 12.7 12.7 1.3 9.3 6.5 3.2 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HeLo PF14479.6 ORF112268 - 0.14 12.0 4.0 0.23 11.3 4.0 1.6 1 1 0 1 1 1 0 Prion-inhibition and propagation Gly_kinase PF02595.15 ORF112268 - 0.15 11.1 0.1 0.21 10.5 0.1 1.4 1 0 0 1 1 1 0 Glycerate kinase family FGase PF05013.12 ORF112268 - 0.16 12.1 0.0 0.37 11.0 0.0 1.4 1 1 0 1 1 1 0 N-formylglutamate amidohydrolase Snapin_Pallidin PF14712.6 ORF112268 - 0.2 12.1 11.2 3.5 8.1 3.9 3.3 2 2 1 3 3 3 0 Snapin/Pallidin DUF3347 PF11827.8 ORF112268 - 0.29 11.3 9.1 0.3 11.2 4.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) Prominin PF05478.11 ORF112268 - 0.38 8.7 13.8 0.5 8.2 13.8 1.1 1 0 0 1 1 1 0 Prominin DUF4359 PF14271.6 ORF112268 - 0.5 11.2 5.7 6.2 7.6 0.1 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4359) Cytochrom_B562 PF07361.11 ORF112268 - 0.61 10.8 5.1 1 10.1 3.0 2.2 1 1 1 2 2 2 0 Cytochrome b562 FlxA PF14282.6 ORF112268 - 0.61 10.1 19.6 0.37 10.8 13.6 2.9 1 1 2 3 3 3 0 FlxA-like protein MCPsignal PF00015.21 ORF112268 - 0.63 9.8 8.1 1.2 8.9 5.1 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Occludin_ELL PF07303.13 ORF112268 - 0.64 10.8 8.9 1.2 9.9 4.2 2.8 2 1 1 3 3 3 0 Occludin homology domain DUF1664 PF07889.12 ORF112268 - 1.6 8.8 10.5 2.7 8.0 3.2 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DivIC PF04977.15 ORF112268 - 2.1 8.1 15.3 1.5 8.7 0.9 3.5 2 2 1 3 3 3 0 Septum formation initiator DUF4795 PF16043.5 ORF112268 - 3.1 7.4 14.6 4.8 6.7 3.4 2.7 1 1 0 2 2 2 0 Domain of unknown function (DUF4795) LPP PF04728.13 ORF112268 - 3.9 7.9 9.1 10 6.6 1.2 3.9 3 2 1 4 4 4 0 Lipoprotein leucine-zipper TMPIT PF07851.13 ORF112268 - 5.8 6.1 11.9 4 6.6 5.0 2.1 1 1 1 2 2 2 0 TMPIT-like protein adh_short PF00106.25 ORF112118 - 1.1e-16 60.8 0.1 1.5e-16 60.5 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF112118 - 2.7e-11 43.5 0.0 3.4e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase HECT PF00632.25 ORF110751 - 3.7e-70 236.8 0.4 4.1e-70 236.7 0.4 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) SID-1_RNA_chan PF13965.6 ORF110521 - 0.0026 16.3 0.4 0.003 16.1 0.4 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 RNA_pol_Rpc4 PF05132.14 ORF110521 - 0.0057 17.1 3.5 0.023 15.1 3.5 1.9 1 1 0 1 1 1 1 RNA polymerase III RPC4 Miga PF10265.9 ORF110521 - 0.0066 15.5 0.4 0.0089 15.1 0.4 1.1 1 0 0 1 1 1 1 Mitoguardin Tim54 PF11711.8 ORF110521 - 0.058 12.2 10.4 0.076 11.8 10.4 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Oxidored_q2 PF00420.24 ORF110521 - 0.11 12.2 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDC45 PF02724.14 ORF110521 - 0.13 10.5 7.3 0.15 10.4 7.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Vfa1 PF08432.10 ORF110521 - 0.16 12.3 12.5 0.21 11.9 12.5 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 LMBR1 PF04791.16 ORF110521 - 0.23 10.3 0.0 0.26 10.1 0.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein LAP1C PF05609.12 ORF110521 - 0.33 10.0 12.0 0.38 9.8 12.0 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) SLC12 PF03522.15 ORF110521 - 0.61 9.0 6.3 0.64 9.0 6.3 1.1 1 0 0 1 1 1 0 Solute carrier family 12 DDHD PF02862.17 ORF110521 - 0.83 9.8 5.8 1 9.5 5.8 1.2 1 0 0 1 1 1 0 DDHD domain PA26 PF04636.13 ORF110521 - 1 8.2 4.7 0.98 8.3 4.7 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) Asp-B-Hydro_N PF05279.11 ORF110521 - 1 9.4 18.0 1.3 9.1 18.0 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Zip PF02535.22 ORF110521 - 1.2 8.3 8.7 1.8 7.7 8.7 1.3 1 1 0 1 1 1 0 ZIP Zinc transporter NPR3 PF03666.13 ORF110521 - 1.3 7.7 11.6 1.5 7.5 11.6 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Hid1 PF12722.7 ORF110521 - 1.8 6.6 10.8 2 6.5 10.8 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF4746 PF15928.5 ORF110521 - 3.2 7.1 16.0 3.8 6.8 16.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) RR_TM4-6 PF06459.12 ORF110521 - 4.9 6.9 15.1 6.6 6.5 15.1 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 SAPS PF04499.15 ORF110521 - 5.7 5.6 11.4 6.5 5.4 11.4 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein TFIIF_alpha PF05793.12 ORF110521 - 6.2 5.3 23.1 7.3 5.1 23.1 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) RP-C_C PF11800.8 ORF110521 - 6.8 6.7 10.6 9.2 6.3 10.6 1.2 1 0 0 1 1 1 0 Replication protein C C-terminal region DUF913 PF06025.12 ORF110521 - 6.9 5.5 8.8 8.1 5.3 8.8 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) MCM_bind PF09739.9 ORF110521 - 7.6 4.9 13.3 9.4 4.5 13.3 1.1 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor PrmA PF06325.13 ORF110196 - 0.24 10.8 0.1 0.29 10.5 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) VPS28 PF03997.12 ORF109636 - 2.7e-28 98.9 1.1 3.2e-28 98.7 1.1 1.1 1 0 0 1 1 1 1 VPS28 protein HalX PF08663.10 ORF109636 - 0.00014 22.1 0.7 0.0048 17.2 0.0 2.4 2 0 0 2 2 2 1 HalX domain Mistic PF11458.8 ORF109636 - 0.015 15.2 0.1 0.08 12.9 0.0 2.1 2 1 0 2 2 2 0 Membrane-integrating protein Mistic SH2_2 PF14633.6 ORF109636 - 0.056 12.8 0.1 0.15 11.5 0.0 1.7 1 1 1 2 2 2 0 SH2 domain DUF572 PF04502.13 ORF106138 - 6.8e-05 22.6 5.3 8.6e-05 22.3 5.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) DUF5563 PF17718.1 ORF106138 - 0.027 14.0 4.5 0.15 11.6 4.5 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5563) BAF1_ABF1 PF04684.13 ORF106138 - 0.1 11.6 3.5 0.12 11.4 3.5 1.1 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor DUF572 PF04502.13 ORF105714 - 6.8e-05 22.6 5.3 8.6e-05 22.3 5.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) DUF5563 PF17718.1 ORF105714 - 0.027 14.0 4.5 0.15 11.6 4.5 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5563) BAF1_ABF1 PF04684.13 ORF105714 - 0.1 11.6 3.5 0.12 11.4 3.5 1.1 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor GvpG PF05120.12 ORF10206 - 0.093 12.8 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Gas vesicle protein G SRA1 PF07304.11 ORF10206 - 0.099 12.4 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) EF-hand_7 PF13499.6 ORF101175 - 0.051 14.0 0.0 0.12 12.8 0.0 1.7 1 0 0 1 1 1 0 EF-hand domain pair Hormone_3 PF00159.18 ORF101175 - 0.057 13.5 0.0 0.18 11.9 0.0 1.9 1 0 0 1 1 1 0 Pancreatic hormone peptide TauD PF02668.16 ORF100776 - 2.1e-33 116.3 0.3 2.4e-33 116.1 0.3 1.0 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family SID-1_RNA_chan PF13965.6 ORF100689 - 0.0026 16.3 0.4 0.003 16.1 0.4 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 RNA_pol_Rpc4 PF05132.14 ORF100689 - 0.0057 17.1 3.5 0.023 15.1 3.5 1.9 1 1 0 1 1 1 1 RNA polymerase III RPC4 Miga PF10265.9 ORF100689 - 0.0066 15.5 0.4 0.0089 15.1 0.4 1.1 1 0 0 1 1 1 1 Mitoguardin Tim54 PF11711.8 ORF100689 - 0.058 12.2 10.4 0.076 11.8 10.4 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Oxidored_q2 PF00420.24 ORF100689 - 0.11 12.2 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDC45 PF02724.14 ORF100689 - 0.13 10.5 7.3 0.15 10.4 7.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Vfa1 PF08432.10 ORF100689 - 0.16 12.3 12.5 0.21 11.9 12.5 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 LMBR1 PF04791.16 ORF100689 - 0.23 10.3 0.0 0.26 10.1 0.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein LAP1C PF05609.12 ORF100689 - 0.33 10.0 12.0 0.38 9.8 12.0 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) SLC12 PF03522.15 ORF100689 - 0.61 9.0 6.3 0.64 9.0 6.3 1.1 1 0 0 1 1 1 0 Solute carrier family 12 DDHD PF02862.17 ORF100689 - 0.83 9.8 5.8 1 9.5 5.8 1.2 1 0 0 1 1 1 0 DDHD domain PA26 PF04636.13 ORF100689 - 1 8.2 4.7 0.98 8.3 4.7 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) Asp-B-Hydro_N PF05279.11 ORF100689 - 1 9.4 18.0 1.3 9.1 18.0 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Zip PF02535.22 ORF100689 - 1.2 8.3 8.7 1.8 7.7 8.7 1.3 1 1 0 1 1 1 0 ZIP Zinc transporter NPR3 PF03666.13 ORF100689 - 1.3 7.7 11.6 1.5 7.5 11.6 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Hid1 PF12722.7 ORF100689 - 1.8 6.6 10.8 2 6.5 10.8 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF4746 PF15928.5 ORF100689 - 3.2 7.1 16.0 3.8 6.8 16.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) RR_TM4-6 PF06459.12 ORF100689 - 4.9 6.9 15.1 6.6 6.5 15.1 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 SAPS PF04499.15 ORF100689 - 5.7 5.6 11.4 6.5 5.4 11.4 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein TFIIF_alpha PF05793.12 ORF100689 - 6.2 5.3 23.1 7.3 5.1 23.1 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) RP-C_C PF11800.8 ORF100689 - 6.8 6.7 10.6 9.2 6.3 10.6 1.2 1 0 0 1 1 1 0 Replication protein C C-terminal region DUF913 PF06025.12 ORF100689 - 6.9 5.5 8.8 8.1 5.3 8.8 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) MCM_bind PF09739.9 ORF100689 - 7.6 4.9 13.3 9.4 4.5 13.3 1.1 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Cons_hypoth95 PF03602.15 ORF100371 - 2.3e-62 209.8 0.0 2.7e-62 209.7 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 ORF100371 - 0.0011 18.6 0.0 0.0015 18.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain MethyltransfD12 PF02086.15 ORF100371 - 0.0047 16.6 0.0 0.42 10.2 0.0 2.1 1 1 1 2 2 2 2 D12 class N6 adenine-specific DNA methyltransferase RrnaAD PF00398.20 ORF100371 - 0.0052 15.9 0.0 0.0073 15.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.17 ORF100371 - 0.018 14.5 0.0 0.025 14.0 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_31 PF13847.6 ORF100371 - 0.18 11.6 0.0 0.24 11.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DUF3525 PF12039.8 NODE_36401_length_589_cov_2.985560_g29260_i0forward_frame_1 - 1.7 7.3 3.7 0.85 8.3 1.8 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3525) PaRep2a PF07903.11 NODE_36390_length_589_cov_97.305054_g29249_i0forward_frame_1 - 0.13 12.1 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 PaRep2a protein Orf78 PF06024.12 NODE_36376_length_589_cov_245.810469_g29238_i0reverse_frame_1 - 0.15 12.3 1.8 6.4 7.1 0.3 2.6 2 1 0 2 2 2 0 Orf78 (ac78) Gcd10p PF04189.13 NODE_36376_length_589_cov_245.810469_g29238_i0reverse_frame_1 - 1.1 8.4 9.5 5.9 5.9 0.3 2.1 2 0 0 2 2 2 0 Gcd10p family RPN13_C PF16550.5 NODE_36352_length_590_cov_78.724324_g29217_i0reverse_frame_1 - 0.15 12.3 0.2 0.27 11.4 0.2 1.5 1 0 0 1 1 1 0 UCH-binding domain Wzy_C PF04932.15 NODE_36352_length_590_cov_78.724324_g29217_i0forward_frame_1 - 0.41 10.3 3.9 0.57 9.8 3.9 1.3 1 0 0 1 1 1 0 O-Antigen ligase TRP PF06011.12 NODE_36351_length_590_cov_79.877477_g29216_i0forward_frame_1 - 6.9e-07 28.4 7.7 8.6e-07 28.0 7.7 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Shisa PF13908.6 NODE_36351_length_590_cov_79.877477_g29216_i0forward_frame_1 - 0.13 12.5 0.1 0.13 12.5 0.1 1.8 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator PHB_acc_N PF07879.11 NODE_36351_length_590_cov_79.877477_g29216_i0forward_frame_1 - 4.9 7.3 7.0 0.57 10.3 2.5 1.7 2 0 0 2 2 2 0 PHB/PHA accumulation regulator DNA-binding domain REC104 PF17378.2 NODE_36327_length_590_cov_639.214414_g29194_i0reverse_frame_1 - 0.002 17.9 0.5 0.0042 16.9 0.4 1.5 1 1 0 1 1 1 1 Meiotic recombination protein REC104 DUF1604 PF07713.13 NODE_36327_length_590_cov_639.214414_g29194_i0reverse_frame_1 - 0.06 13.2 0.8 0.11 12.3 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) YABBY PF04690.13 NODE_36327_length_590_cov_639.214414_g29194_i0reverse_frame_1 - 0.071 13.7 1.0 0.1 13.2 1.0 1.2 1 0 0 1 1 1 0 YABBY protein Helitron_like_N PF14214.6 NODE_36319_length_591_cov_2.526978_g29186_i0forward_frame_1 - 0.08 13.1 0.1 0.29 11.3 0.0 1.6 1 1 0 2 2 2 0 Helitron helicase-like domain at N-terminus SHIPPO-rpt PF07004.12 NODE_36313_length_591_cov_4.343525_g29180_i0forward_frame_1 - 1.7e-13 50.8 26.6 0.00011 23.0 4.8 6.3 6 0 0 6 6 6 6 Sperm-tail PG-rich repeat Acp26Ab PF05777.12 NODE_36302_length_591_cov_74.841727_g29169_i0forward_frame_1 - 0.065 13.9 0.2 0.16 12.6 0.0 1.7 2 0 0 2 2 2 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) cwf18 PF08315.12 NODE_36280_length_591_cov_210.915468_g29149_i0forward_frame_1 - 0.088 13.5 6.3 0.14 12.8 6.3 1.4 1 1 0 1 1 1 0 cwf18 pre-mRNA splicing factor DUF1685 PF07939.11 NODE_36275_length_591_cov_504.285971_g9101_i2forward_frame_1 - 0.066 13.0 0.0 0.15 11.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) DUF4775 PF16001.5 NODE_36256_length_592_cov_80.736086_g29128_i0reverse_frame_2 - 0.014 14.9 18.4 0.018 14.5 18.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4775) DUF4011 PF13195.6 NODE_36256_length_592_cov_80.736086_g29128_i0reverse_frame_2 - 0.069 13.1 5.3 0.11 12.4 5.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4011) SR-25 PF10500.9 NODE_36256_length_592_cov_80.736086_g29128_i0reverse_frame_2 - 3.5 7.2 28.3 4.4 6.8 28.3 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4625 PF15418.6 NODE_36232_length_592_cov_266.615799_g29106_i0reverse_frame_2 - 0.049 13.9 1.0 0.066 13.5 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4625) DUF2208 PF09973.9 NODE_36222_length_592_cov_9040.073609_g29098_i0forward_frame_3 - 8.8 5.9 8.1 2.9 7.4 5.4 1.6 2 0 0 2 2 2 0 Predicted membrane protein (DUF2208) NIF PF03031.18 NODE_36215_length_593_cov_2.498208_g29091_i0reverse_frame_2 - 7.2e-24 84.3 0.1 1.4e-23 83.4 0.0 1.4 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase TTL PF03133.15 NODE_36214_length_593_cov_2.537634_g29090_i0reverse_frame_3 - 6.1e-27 94.5 0.1 7.5e-27 94.2 0.1 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Pho88 PF10032.9 NODE_36205_length_593_cov_61.765233_g29081_i0reverse_frame_3 - 0.086 12.1 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Phosphate transport (Pho88) Gag_spuma PF03276.14 NODE_36202_length_593_cov_70.793907_g29079_i0forward_frame_3 - 0.25 9.7 0.1 0.31 9.4 0.1 1.1 1 0 0 1 1 1 0 Spumavirus gag protein PDR_CDR PF06422.12 NODE_36200_length_593_cov_73.519713_g29077_i0forward_frame_2 - 0.13 12.1 0.7 0.35 10.8 0.7 1.8 1 0 0 1 1 1 0 CDR ABC transporter Phage_holin_3_6 PF07332.11 NODE_36200_length_593_cov_73.519713_g29077_i0forward_frame_2 - 0.34 11.0 1.2 0.52 10.4 1.2 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DpnII PF04556.12 NODE_36198_length_593_cov_78.908602_g29075_i0reverse_frame_2 - 0.025 13.9 0.2 0.034 13.5 0.2 1.1 1 0 0 1 1 1 0 DpnII restriction endonuclease TPR_14 PF13428.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 1.9e-13 50.0 0.1 0.0035 18.0 0.0 5.1 2 2 4 6 6 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 4.3e-12 46.4 5.0 9.8e-05 22.8 0.5 3.3 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_15 PF13429.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 3.5e-06 26.4 1.0 0.0083 15.4 0.3 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 4.9e-06 26.2 1.3 0.25 11.6 0.0 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 6.9e-06 26.6 0.0 0.0037 17.9 0.0 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 7.3e-06 26.3 0.8 1.6 9.5 0.0 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 1.4e-05 24.7 5.8 0.14 11.9 0.0 4.4 4 1 0 4 4 4 2 TPR repeat NARP1 PF12569.8 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.00012 21.2 2.7 0.18 10.7 0.5 2.0 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 TPR_12 PF13424.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.00012 22.3 0.3 0.21 11.9 0.0 3.7 3 1 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0004 20.1 2.9 2.4 8.1 0.2 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.00081 19.3 1.7 0.83 9.8 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat PPR PF01535.20 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.00093 19.3 0.0 1 9.8 0.0 3.9 4 0 0 4 4 3 1 PPR repeat FAT PF02259.23 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0013 18.0 1.8 0.56 9.4 0.4 2.3 1 1 1 2 2 2 2 FAT domain TPR_8 PF13181.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0015 18.6 6.5 0.38 11.1 0.1 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_21 PF09976.9 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0017 18.1 1.5 1.1 9.0 0.8 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat-like domain TPR_MalT PF17874.1 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.002 17.6 0.3 0.24 10.7 0.0 2.1 1 1 1 2 2 2 1 MalT-like TPR region ANAPC3 PF12895.7 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.002 18.3 3.1 0.75 10.1 0.1 2.9 2 1 1 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0026 17.6 4.2 0.51 10.3 0.0 4.0 3 1 0 4 4 4 1 Tetratricopeptide repeat DUF3808 PF10300.9 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.012 14.4 0.2 0.5 9.0 0.0 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3808) DUF627 PF04781.12 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.04 13.9 0.5 0.19 11.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF627) Mad3_BUB1_I PF08311.12 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.1 12.6 1.7 0.85 9.6 0.0 2.9 3 1 0 3 3 3 0 Mad3/BUB1 homology region 1 Babuvirus_MP PF07234.11 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.14 12.3 0.1 0.27 11.4 0.1 1.6 1 0 0 1 1 1 0 Movement and RNA silencing protein Suf PF05843.14 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.16 11.9 0.9 0.29 11.1 0.8 1.4 1 1 0 1 1 1 0 Suppressor of forked protein (Suf) DUF713 PF05218.14 NODE_36169_length_594_cov_2.633274_g29050_i0reverse_frame_3 - 0.0048 16.6 0.2 0.0086 15.8 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF713) DUF4580 PF15162.6 NODE_36169_length_594_cov_2.633274_g29050_i0reverse_frame_2 - 0.048 13.2 0.1 0.071 12.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4580) Aldo_ket_red PF00248.21 NODE_36153_length_594_cov_90.459750_g29034_i0reverse_frame_2 - 1.2e-25 90.3 0.0 1.9e-25 89.7 0.0 1.3 1 0 0 1 1 1 1 Aldo/keto reductase family Molydop_binding PF01568.21 NODE_36153_length_594_cov_90.459750_g29034_i0reverse_frame_2 - 0.12 12.4 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain Ank_2 PF12796.7 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_3 - 3.2e-15 56.5 0.0 4.5e-15 56.0 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_3 - 6.5e-14 52.1 0.0 4.9e-09 36.6 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_3 - 2.8e-12 46.6 0.1 2.7e-07 30.7 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_3 - 4.5e-11 42.7 0.0 2e-05 24.8 0.0 3.4 3 1 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_36149_length_594_cov_116.227191_g29030_i0forward_frame_3 - 5e-08 32.6 0.0 7.6e-05 22.8 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeat Sharpin_PH PF16764.5 NODE_36143_length_594_cov_157.719141_g29024_i0reverse_frame_2 - 0.028 14.2 0.2 8.8 6.1 0.0 2.3 2 0 0 2 2 2 0 Sharpin PH domain T2SSC PF11356.8 NODE_36143_length_594_cov_157.719141_g29024_i0forward_frame_3 - 0.15 11.9 0.1 19 5.2 0.0 2.2 2 0 0 2 2 2 0 Type II secretion system protein C SelK_SelG PF10961.8 NODE_36143_length_594_cov_157.719141_g29024_i0forward_frame_3 - 4.5 7.9 5.7 56 4.4 3.9 3.0 1 1 0 2 2 2 0 Selenoprotein SelK_SelG DUF1415 PF07209.12 NODE_36128_length_594_cov_34496.078712_g20842_i1forward_frame_3 - 0.00044 20.1 0.0 0.00056 19.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1415) CHDCT2 PF08074.11 ORF99337 - 0.037 14.2 0.3 0.054 13.7 0.3 1.2 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain DUF3763 PF12592.8 ORF9781 - 3.9e-23 81.3 2.6 3.9e-23 81.3 2.6 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3763) Perilipin PF03036.16 ORF9781 - 0.031 13.3 0.4 0.037 13.1 0.4 1.3 1 1 0 1 1 1 0 Perilipin family COPI_assoc PF08507.10 ORF97010 - 5.7e-09 36.1 6.8 8.4e-09 35.6 6.8 1.3 1 0 0 1 1 1 1 COPI associated protein CTV_P6 PF06706.11 ORF97010 - 0.56 9.9 6.3 1.8 8.3 0.4 3.3 3 0 0 3 3 3 0 Citrus tristeza virus 6-kDa protein FUSC PF04632.12 ORF95349 - 0.0063 15.1 8.2 0.0082 14.7 8.2 1.1 1 0 0 1 1 1 1 Fusaric acid resistance protein family IstB_IS21 PF01695.17 ORF93670 - 0.049 13.4 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein SURF4 PF02077.15 ORF93670 - 0.56 9.8 7.1 2.3 7.7 3.3 2.2 2 0 0 2 2 2 0 SURF4 family TLD PF07534.16 ORF93005 - 4.2e-25 88.6 0.0 5.2e-25 88.3 0.0 1.1 1 0 0 1 1 1 1 TLD Cons_hypoth698 PF03601.14 ORF89710 - 7.1e-40 136.8 5.8 8.1e-40 136.6 5.8 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 698 DUF2818 PF10993.8 ORF89710 - 0.017 15.7 0.3 0.044 14.3 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2818) Methyltransf_31 PF13847.6 ORF89387 - 0.0033 17.2 0.0 0.0043 16.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF89387 - 0.0073 17.0 0.1 0.025 15.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Ank_5 PF13857.6 ORF88559 - 3e-28 97.5 16.1 9.8e-10 38.5 0.8 5.0 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF88559 - 8e-27 93.7 3.7 1.1e-16 61.2 0.4 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF88559 - 1.7e-23 82.7 2.3 1.6e-08 34.9 0.1 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF88559 - 5.5e-20 69.3 2.6 0.0016 18.7 0.1 5.1 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF88559 - 3.3e-18 65.2 12.5 6.3e-05 23.2 0.2 5.2 6 0 0 6 6 6 4 Ankyrin repeat PUB_1 PF18486.1 ORF88559 - 0.026 14.4 5.3 1 9.3 0.1 3.3 2 1 1 3 3 3 0 PNGase/UBA- or UBX-containing domain HypA PF01155.19 ORF88559 - 0.042 13.9 0.0 0.091 12.8 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EccE PF11203.8 ORF88559 - 0.78 10.1 7.3 6.8 7.1 6.9 2.5 1 1 0 1 1 1 0 Putative type VII ESX secretion system translocon, EccE Pkinase PF00069.25 ORF88189 - 3.3e-05 23.4 0.0 4.6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain HI0933_like PF03486.14 ORF88060 - 0.13 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein SHIPPO-rpt PF07004.12 ORF87420 - 0.00042 21.1 1.0 11 7.1 0.1 3.7 3 0 0 3 3 3 2 Sperm-tail PG-rich repeat RS4NT PF08071.12 ORF87420 - 5.2 7.3 11.4 38 4.5 0.0 4.1 4 0 0 4 4 4 0 RS4NT (NUC023) domain EF-hand_7 PF13499.6 ORF86366 - 3.3e-12 46.7 5.4 9.1e-09 35.6 1.3 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF86366 - 7e-11 40.9 0.3 8.2e-06 25.0 0.0 2.6 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF86366 - 4.5e-08 32.4 0.4 0.00033 20.3 0.1 2.8 1 1 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF86366 - 1e-06 28.5 1.0 0.041 13.7 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF86366 - 3.1e-06 26.4 0.8 0.0061 16.0 0.1 2.5 2 0 0 2 2 2 2 EF hand EF-hand_9 PF14658.6 ORF86366 - 0.079 13.3 0.0 0.17 12.2 0.0 1.7 1 0 0 1 1 1 0 EF-hand domain EF-hand_4 PF12763.7 ORF86366 - 0.19 11.7 1.8 3.1 7.8 0.1 2.2 1 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand TetR_C_36 PF18598.1 ORF84011 - 0.12 12.3 0.0 0.69 9.9 0.0 2.0 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Nramp PF01566.18 ORF8195 - 1e-53 182.6 0.2 1.1e-53 182.5 0.2 1.0 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein Polysacc_synt PF01943.17 ORF8195 - 0.016 14.6 1.0 0.024 14.0 1.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Hema_HEFG PF02710.14 ORF8195 - 0.18 12.0 0.0 0.25 11.6 0.0 1.2 1 0 0 1 1 1 0 Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein Snf7 PF03357.21 ORF80811 - 2e-26 92.7 13.5 2.3e-26 92.4 13.5 1.0 1 0 0 1 1 1 1 Snf7 HlyD_2 PF12700.7 ORF80811 - 0.00098 18.0 1.7 0.0012 17.7 1.7 1.0 1 0 0 1 1 1 1 HlyD family secretion protein FapA PF03961.13 ORF80811 - 0.21 10.1 2.4 0.26 9.8 2.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Ribosomal_60s PF00428.19 ORF80811 - 0.26 11.9 10.1 0.05 14.2 5.8 2.0 2 1 0 2 2 2 0 60s Acidic ribosomal protein DUF2451 PF10474.9 ORF80571 - 0.00061 19.6 0.3 0.00093 19.0 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function C-terminus (DUF2451) TSNAXIP1_N PF15739.5 ORF80571 - 0.027 14.9 1.0 0.027 14.9 1.0 2.9 1 1 1 3 3 3 0 Translin-associated factor X-interacting N-terminus KxDL PF10241.9 ORF80571 - 0.032 14.5 1.9 12 6.2 0.2 3.1 2 1 1 3 3 3 0 Uncharacterized conserved protein HycH PF07450.11 ORF80571 - 0.061 13.7 0.2 0.14 12.5 0.1 1.7 1 1 1 2 2 2 0 Formate hydrogenlyase maturation protein HycH Wtap PF17098.5 ORF80571 - 0.086 12.8 3.0 0.091 12.7 0.6 2.1 2 1 0 2 2 2 0 WTAP/Mum2p family Retrotrans_gag PF03732.17 ORF80571 - 0.92 9.8 3.9 21 5.4 0.0 3.0 2 1 1 3 3 3 0 Retrotransposon gag protein 7TM_GPCR_Sri PF10327.9 ORF80090 - 0.047 12.9 4.3 0.066 12.4 4.3 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sri m04gp34like PF12216.8 ORF80090 - 0.065 12.8 0.0 0.14 11.7 0.0 1.6 2 0 0 2 2 2 0 Immune evasion protein Torus PF16131.5 ORF80014 - 0.013 16.2 1.8 0.02 15.6 1.8 1.2 1 0 0 1 1 1 0 Torus domain HMGL-like PF00682.19 ORF80014 - 0.019 14.5 0.0 0.025 14.2 0.0 1.1 1 0 0 1 1 1 0 HMGL-like SURF2 PF05477.11 ORF79320 - 0.14 11.8 7.5 0.17 11.5 7.5 1.2 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) Ank_2 PF12796.7 ORF77914 - 2.1e-12 47.4 0.0 9.1e-08 32.6 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF77914 - 2.6e-09 37.1 0.2 0.00043 20.6 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF77914 - 2e-06 27.6 0.3 0.089 13.4 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF77914 - 2.1e-06 28.2 0.2 0.028 15.0 0.0 2.6 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF77914 - 0.0011 19.3 0.3 0.051 13.9 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) MORN PF02493.20 ORF76935 - 1.1e-27 94.2 39.8 2.4e-08 33.4 0.8 8.3 7 1 2 9 9 9 7 MORN repeat He_PIG PF05345.12 ORF74705 - 8.8e-05 22.6 0.6 0.0002 21.5 0.6 1.6 1 0 0 1 1 1 1 Putative Ig domain Alba PF01918.21 ORF73676 - 3.1e-10 39.7 0.1 4.3e-10 39.3 0.1 1.2 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 ORF73676 - 0.011 15.7 0.0 0.012 15.6 0.0 1.3 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P ADIP PF11559.8 ORF71321 - 0.0016 18.5 1.0 0.0016 18.5 1.0 2.4 3 0 0 3 3 3 1 Afadin- and alpha -actinin-Binding DUF2095 PF09868.9 ORF71321 - 0.045 13.7 3.4 0.095 12.7 0.2 2.6 1 1 2 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2095) Cep57_CLD_2 PF14197.6 ORF71321 - 0.065 13.3 1.0 0.065 13.3 1.0 2.3 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 DivIC PF04977.15 ORF71321 - 0.075 12.8 0.9 0.075 12.8 0.9 2.2 2 0 0 2 2 2 0 Septum formation initiator TPX2 PF06886.11 ORF71321 - 0.096 12.9 1.0 0.096 12.9 1.0 2.2 2 0 0 2 2 2 0 Targeting protein for Xklp2 (TPX2) PRKG1_interact PF15898.5 ORF71321 - 0.13 13.2 9.4 0.17 12.8 2.2 2.4 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain ANAPC4_WD40 PF12894.7 ORF71300 - 0.0018 18.5 0.2 1.5 9.2 0.0 2.3 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain MFS_1 PF07690.16 ORF68418 - 0.00014 20.9 8.2 0.00015 20.8 7.9 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF68418 - 0.0018 17.2 1.0 0.0018 17.2 1.0 1.7 2 0 0 2 2 2 1 Sugar (and other) transporter Aldo_ket_red PF00248.21 ORF67992 - 7.3e-30 104.2 0.0 2.4e-28 99.2 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family PROL5-SMR PF15621.6 ORF67446 - 0.19 12.3 3.0 0.36 11.4 3.0 1.5 1 1 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Aft1_OSA PF11785.8 ORF65424 - 0.0037 17.7 1.1 0.0073 16.7 1.1 1.5 1 0 0 1 1 1 1 Aft1 osmotic stress response (OSM) domain Hom_end_hint PF05203.16 ORF65424 - 0.0053 16.7 0.3 0.0065 16.5 0.3 1.3 1 0 0 1 1 1 1 Hom_end-associated Hint BCL_N PF04714.13 ORF65424 - 0.013 15.6 0.2 0.023 14.7 0.2 1.5 1 0 0 1 1 1 0 BCL7, N-terminal conserver region Ank_2 PF12796.7 ORF65314 - 5.1e-11 43.0 0.0 2.9e-05 24.6 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF65314 - 4.2e-09 36.5 0.8 0.0021 18.3 0.1 3.5 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF65314 - 7.2e-09 35.2 0.1 0.017 15.6 0.0 4.4 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF65314 - 2.1e-06 28.2 0.2 1.3 9.6 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF65314 - 0.00089 19.6 0.0 1.8 9.1 0.1 3.2 2 1 0 2 2 2 2 Ankyrin repeat Calreticulin PF00262.18 ORF64141 - 7.3e-25 87.6 0.9 2.4e-21 76.0 0.1 2.1 1 1 1 2 2 2 2 Calreticulin family DUF4498 PF14926.6 ORF62102 - 7.6e-53 179.4 0.0 8.4e-53 179.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4498) LAT PF15234.6 ORF61864 - 0.057 13.2 2.4 0.097 12.4 2.4 1.4 1 0 0 1 1 1 0 Linker for activation of T-cells Asp PF00026.23 ORF61407 - 4.8e-13 49.2 0.0 5.7e-13 49.0 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Band_7 PF01145.25 ORF60650 - 5e-06 26.7 0.0 8.6e-06 25.9 0.0 1.5 2 0 0 2 2 2 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 ORF60650 - 0.11 12.2 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 SPFH domain-Band 7 family RicinB_lectin_2 PF14200.6 ORF60068 - 0.035 14.8 0.0 0.1 13.4 0.0 1.7 2 0 0 2 2 2 0 Ricin-type beta-trefoil lectin domain-like FRG1 PF06229.12 ORF60068 - 0.1 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 FRG1-like domain FUSC PF04632.12 ORF57181 - 0.0063 15.1 8.2 0.0082 14.7 8.2 1.1 1 0 0 1 1 1 1 Fusaric acid resistance protein family RabGAP-TBC PF00566.18 ORF55947 - 2.2e-21 76.5 1.0 2.5e-21 76.3 1.0 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain zf-MYND PF01753.18 ORF53468 - 4.1e-09 36.4 23.0 7.4e-09 35.6 23.0 1.5 1 0 0 1 1 1 1 MYND finger Pilus_CpaD PF09476.10 ORF53098 - 0.034 13.9 0.3 0.16 11.7 0.2 1.8 1 1 1 2 2 2 0 Pilus biogenesis CpaD protein (pilus_cpaD) X PF00739.19 ORF5283 - 0.1 12.7 0.8 0.2 11.8 0.8 1.5 1 0 0 1 1 1 0 Trans-activation protein X DUF1322 PF07032.11 ORF528 - 0.3 11.7 7.9 2.2 8.9 0.4 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1322) Chloroa_b-bind PF00504.21 ORF52030 - 1.5e-30 106.9 0.1 1.8e-30 106.6 0.1 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein HI0933_like PF03486.14 ORF51609 - 0.13 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein Ribosomal_L11 PF00298.19 ORF50725 - 1.3 9.6 3.4 1.9 9.0 0.7 2.2 2 0 0 2 2 2 0 Ribosomal protein L11, RNA binding domain Tyrosinase PF00264.20 ORF50665 - 1.4e-07 32.1 0.1 1.9e-07 31.6 0.1 1.4 1 0 0 1 1 1 1 Common central domain of tyrosinase TMEM135_C_rich PF15982.5 ORF50593 - 4.5e-05 24.1 1.5 6.2e-05 23.6 1.2 1.4 1 1 0 1 1 1 1 N-terminal cysteine-rich region of Transmembrane protein 135 Tim17 PF02466.19 ORF50593 - 0.012 16.0 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks102.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks102.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks102.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks102.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ASFV_J13L PF05568.11 ORF49058 - 5.4e-06 26.3 9.9 0.022 14.5 1.8 2.9 1 1 1 2 2 2 2 African swine fever virus J13L protein HC2 PF07382.11 ORF49058 - 7.9e-06 26.1 0.0 1.1e-05 25.7 0.0 1.1 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 KIP1 PF07765.12 ORF49043 - 0.96 9.6 6.2 0.27 11.4 2.4 2.0 2 0 0 2 2 2 0 KIP1-like protein DUF87 PF01935.17 ORF49043 - 1.7 8.6 6.4 0.56 10.3 1.8 1.9 1 1 1 2 2 2 0 Helicase HerA, central domain LMBR1 PF04791.16 ORF49043 - 5.8 5.7 6.0 6.5 5.5 6.0 1.2 1 1 0 1 1 1 0 LMBR1-like membrane protein PMEI PF04043.15 ORF46905 - 0.14 12.5 0.2 0.2 12.0 0.2 1.2 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor NAD_binding_4 PF07993.12 ORF45960 - 0.0036 16.5 0.0 0.0048 16.1 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein Calreticulin PF00262.18 ORF44381 - 4.9e-25 88.2 1.2 1.4e-21 76.8 0.1 2.1 1 1 1 2 2 2 2 Calreticulin family betaPIX_CC PF16523.5 ORF43041 - 0.0011 18.7 8.5 0.16 11.8 2.2 2.6 2 1 0 2 2 2 2 betaPIX coiled coil Mistic PF11458.8 ORF43041 - 0.01 15.8 5.6 0.31 11.0 1.8 2.5 2 0 0 2 2 2 0 Membrane-integrating protein Mistic ApoC-I PF04691.12 ORF43041 - 0.043 13.8 7.1 0.23 11.4 0.4 2.7 3 0 0 3 3 3 0 Apolipoprotein C-I (ApoC-1) DUF1759 PF03564.15 ORF43041 - 0.062 13.2 3.7 0.082 12.8 3.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1759) Syntaxin-6_N PF09177.11 ORF43041 - 0.15 12.6 8.0 0.27 11.8 7.2 1.9 1 1 1 2 2 2 0 Syntaxin 6, N-terminal BLOC1_2 PF10046.9 ORF43041 - 0.16 12.3 8.1 0.12 12.7 5.9 1.9 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ZapB PF06005.12 ORF43041 - 0.29 11.6 14.4 0.13 12.7 4.4 2.5 2 0 0 2 2 2 0 Cell division protein ZapB Golgin_A5 PF09787.9 ORF43041 - 0.3 10.5 14.3 0.23 10.9 12.8 1.6 1 1 0 1 1 1 0 Golgin subfamily A member 5 Spectrin PF00435.21 ORF43041 - 0.78 10.3 19.6 0.92 10.0 7.7 2.3 1 1 1 2 2 2 0 Spectrin repeat Cnn_1N PF07989.11 ORF43041 - 1.3 9.2 15.9 0.095 12.9 4.0 2.7 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 DUF1664 PF07889.12 ORF43041 - 1.4 9.0 6.9 2.2 8.3 5.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) TSC22 PF01166.18 ORF43041 - 1.6 9.1 6.5 0.23 11.8 1.6 2.1 2 0 0 2 2 2 0 TSC-22/dip/bun family Prominin PF05478.11 ORF43041 - 1.8 6.4 6.0 2.2 6.1 6.0 1.1 1 0 0 1 1 1 0 Prominin OmpH PF03938.14 ORF43041 - 1.8 8.9 17.1 0.16 12.3 11.3 1.9 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) DUF5611 PF18446.1 ORF43041 - 2.5 9.0 8.2 0.52 11.2 0.9 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF5611) Jnk-SapK_ap_N PF09744.9 ORF43041 - 2.6 8.2 19.3 4.7 7.4 19.2 1.5 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Metal_resist PF13801.6 ORF43041 - 3 8.1 7.1 0.35 11.1 1.8 2.0 2 0 0 2 2 2 0 Heavy-metal resistance DUF3450 PF11932.8 ORF43041 - 3.1 7.1 13.2 1.8 7.8 11.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) YabA PF06156.13 ORF43041 - 3.6 8.3 13.8 0.24 12.1 3.5 2.4 1 1 1 2 2 2 0 Initiation control protein YabA PRKG1_interact PF15898.5 ORF43041 - 5.1 8.0 15.6 1.1 10.3 5.8 2.4 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain FUSC PF04632.12 ORF43041 - 5.5 5.4 4.9 6.7 5.1 4.9 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF2205 PF10224.9 ORF43041 - 7.4 6.6 12.7 0.76 9.8 2.8 3.0 1 1 2 3 3 3 0 Short coiled-coil protein Acetyltransf_1 PF00583.25 ORF40745 - 9.1e-10 38.8 0.1 1.4e-09 38.2 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF40745 - 1.2e-09 38.1 0.0 1.9e-09 37.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF40745 - 3.6e-07 30.5 0.1 5.7e-07 29.9 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF40745 - 0.00012 22.1 0.1 0.00025 21.1 0.1 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 ORF40745 - 0.0042 17.2 0.0 0.0057 16.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF40745 - 0.0082 16.1 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Rhodanese PF00581.20 ORF4056 - 7.3e-07 29.7 0.0 1.2e-06 29.0 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain Colicin PF01024.19 ORF40442 - 0.0081 16.1 7.2 0.0081 16.1 7.2 1.6 1 1 1 2 2 2 1 Colicin pore forming domain TPD PF14811.6 ORF40442 - 0.12 12.3 5.3 2.9 7.8 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function TPD sequence-motif GDP_Man_Dehyd PF16363.5 ORF37775 - 2.5e-65 221.1 0.0 2.9e-65 220.9 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF37775 - 6.8e-18 65.0 0.0 9.2e-18 64.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Oxysterol_BP PF01237.18 ORF35503 - 2.2e-21 76.1 0.3 2.5e-21 75.9 0.3 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Ras PF00071.22 ORF35307 - 6.9e-52 175.3 0.0 8.2e-52 175.1 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF35307 - 3.5e-23 82.1 0.0 5.4e-23 81.5 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF35307 - 2.6e-08 33.5 0.0 3.1e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF35307 - 0.063 13.4 0.0 0.13 12.4 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF35307 - 0.064 12.8 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Gtr1_RagA PF04670.12 ORF35307 - 0.068 12.5 0.0 0.099 12.0 0.0 1.3 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Astro_capsid_p PF12226.8 ORF33659 - 0.053 12.7 0.0 0.085 12.0 0.0 1.3 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Granin PF01271.17 ORF32653 - 0.23 10.3 0.0 0.29 10.0 0.0 1.1 1 0 0 1 1 1 0 Granin (chromogranin or secretogranin) DUF4291 PF14124.6 ORF31312 - 1.3e-45 155.5 0.7 3.1e-44 151.0 0.7 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4291) GAS PF13851.6 ORF29902 - 0.61 9.4 13.3 3.2 7.1 5.3 2.3 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Methyltr_RsmB-F PF01189.17 ORF29236 - 2.6e-19 69.7 0.0 3.1e-19 69.4 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F MpPF26 PF07666.11 ORF25391 - 0.02 15.0 3.4 0.25 11.5 1.3 2.2 2 0 0 2 2 2 0 M penetrans paralogue family 26 GWT1 PF06423.12 ORF25391 - 0.053 13.6 0.3 0.085 13.0 0.2 1.6 1 1 0 1 1 1 0 GWT1 FAST_1 PF06743.15 ORF24798 - 0.021 14.7 0.9 0.13 12.2 0.2 2.5 2 1 1 3 3 3 0 FAST kinase-like protein, subdomain 1 POTRA_2 PF08479.11 ORF24798 - 0.078 12.8 0.1 0.49 10.3 0.0 2.2 1 1 2 3 3 3 0 POTRA domain, ShlB-type PAN_1 PF00024.26 ORF22467 - 0.026 14.5 0.1 0.043 13.8 0.1 1.4 1 0 0 1 1 1 0 PAN domain PAN_4 PF14295.6 ORF22467 - 0.038 13.9 1.5 0.091 12.7 1.5 1.7 1 0 0 1 1 1 0 PAN domain NAD_binding_9 PF13454.6 ORF22398 - 0.013 15.5 0.2 0.06 13.3 0.1 1.9 1 1 1 2 2 2 0 FAD-NAD(P)-binding Y_phosphatase PF00102.27 ORF22218 - 1e-43 149.6 0.1 1.2e-43 149.4 0.1 1.0 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.20 ORF22218 - 9.9e-05 22.2 0.0 0.00015 21.6 0.0 1.5 1 1 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 ORF22218 - 0.00018 21.6 0.0 0.0003 20.9 0.0 1.4 1 1 0 1 1 1 1 Inositol hexakisphosphate Y_phosphatase3 PF13350.6 ORF22218 - 0.00026 21.0 0.0 0.00032 20.8 0.0 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family FKBP_C PF00254.28 ORF18912 - 3.4e-22 78.6 0.0 4.7e-22 78.1 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF4291 PF14124.6 ORF18569 - 1.3e-45 155.5 0.7 3.1e-44 151.0 0.7 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4291) NAD_binding_4 PF07993.12 ORF17523 - 0.0036 16.5 0.0 0.0048 16.1 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein BPD_transp_1 PF00528.22 ORF16750 - 1.6e-33 116.0 9.2 1.8e-33 115.8 9.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component TB2_DP1_HVA22 PF03134.19 ORF15623 - 1.3e-24 86.0 4.9 1.3e-24 86.0 4.9 1.6 1 1 1 2 2 2 1 TB2/DP1, HVA22 family TBP PF00352.21 ORF13916 - 1.2e-64 214.3 1.1 1.7e-31 108.0 0.0 2.1 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 ORF13916 - 1.6e-06 28.2 0.4 0.062 13.4 0.0 2.5 2 1 0 2 2 2 2 Domain of unknown function (DUF3378) Calreticulin PF00262.18 ORF12879 - 6.8e-25 87.7 1.0 2.1e-21 76.2 0.1 2.1 1 1 1 2 2 2 2 Calreticulin family MSA-2c PF12238.8 ORF12235 - 0.17 11.8 4.9 1 9.3 1.9 2.6 1 1 1 2 2 2 0 Merozoite surface antigen 2c Phage_lysozyme PF00959.19 ORF12002 - 0.12 12.8 0.5 0.21 12.1 0.5 1.4 1 0 0 1 1 1 0 Phage lysozyme Colicin PF01024.19 ORF109939 - 0.0081 16.1 7.2 0.0081 16.1 7.2 1.6 1 1 1 2 2 2 1 Colicin pore forming domain TPD PF14811.6 ORF109939 - 0.12 12.3 5.3 2.9 7.8 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function TPD sequence-motif Receptor_2B4 PF11465.8 ORF10816 - 0.088 13.0 0.3 0.17 12.1 0.3 1.5 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 DUF3969 PF13108.6 ORF107375 - 0.031 14.3 1.4 0.033 14.2 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3969) CoA_trans PF01144.23 ORF107264 - 3.7e-33 114.7 0.2 4.4e-33 114.5 0.2 1.0 1 0 0 1 1 1 1 Coenzyme A transferase AcetylCoA_hyd_C PF13336.6 ORF107264 - 0.031 14.2 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase C-terminal domain TIG PF01833.24 ORF10651 - 0.00088 19.3 0.2 0.0014 18.6 0.2 1.3 1 0 0 1 1 1 1 IPT/TIG domain KH_1 PF00013.29 ORF104684 - 1.2e-13 50.7 0.1 1.8e-13 50.1 0.1 1.3 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF104684 - 0.00016 21.4 0.1 0.00031 20.5 0.1 1.5 1 0 0 1 1 1 1 KH domain Ribosomal_60s PF00428.19 ORF104684 - 0.23 12.1 4.6 0.084 13.5 1.2 2.0 2 0 0 2 2 2 0 60s Acidic ribosomal protein DnaJ PF00226.31 ORF101836 - 4.9e-20 71.4 2.9 4.9e-20 71.4 2.9 1.8 2 0 0 2 2 2 1 DnaJ domain Myb_DNA-bind_6 PF13921.6 ORF101836 - 0.29 11.4 2.4 7.1 7.0 0.8 2.5 2 0 0 2 2 2 0 Myb-like DNA-binding domain TubC_N PF18563.1 ORF101836 - 0.88 9.6 5.8 5.1 7.2 0.1 3.3 3 0 0 3 3 3 0 TubC N-terminal docking domain AAA_11 PF13086.6 ORF101836 - 1.9 8.2 7.5 2.5 7.8 7.5 1.1 1 0 0 1 1 1 0 AAA domain HI0933_like PF03486.14 ORF10177 - 0.13 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein MFS_1 PF07690.16 ORF101714 - 0.00014 20.9 8.2 0.00015 20.8 7.9 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF101714 - 0.0018 17.2 1.0 0.0018 17.2 1.0 1.7 2 0 0 2 2 2 1 Sugar (and other) transporter BPD_transp_1 PF00528.22 ORF101337 - 1.6e-33 116.0 9.2 1.8e-33 115.8 9.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CAS_C PF12026.8 NODE_36582_length_586_cov_1.662432_g29426_i0forward_frame_1 - 2 8.5 3.8 0.44 10.6 0.3 1.6 2 0 0 2 2 2 0 Crk-Associated Substrate C-terminal domain DUF3251 PF11622.8 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 1.4e-52 177.7 0.7 1.8e-52 177.3 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3251) TMF_TATA_bd PF12325.8 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 0.013 15.8 0.3 0.034 14.4 0.5 1.5 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding Comm PF15957.5 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 0.07 13.5 0.1 0.17 12.3 0.1 1.6 2 0 0 2 2 2 0 Commissureless DASH_Dad4 PF08650.10 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 0.078 13.0 1.1 0.33 11.0 1.5 1.7 2 0 0 2 2 2 0 DASH complex subunit Dad4 LURAP PF14854.6 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 0.16 12.0 0.7 0.51 10.3 0.7 1.8 1 1 0 1 1 1 0 Leucine rich adaptor protein Dis3l2_C_term PF17877.1 NODE_36576_length_586_cov_40.121597_g29420_i0forward_frame_1 - 0.13 12.6 0.3 0.29 11.5 0.3 1.5 1 0 0 1 1 1 0 DIS3-like exonuclease 2 C terminal Defensin_big PF14862.6 NODE_36566_length_586_cov_87.687840_g29410_i0forward_frame_1 - 0.12 12.7 0.3 16 5.9 0.1 2.4 2 0 0 2 2 2 0 Big defensin CENP-H PF05837.12 NODE_36566_length_586_cov_87.687840_g29410_i0forward_frame_1 - 0.93 9.9 9.1 0.46 10.9 6.8 1.7 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Msg2_C PF12373.8 NODE_36566_length_586_cov_87.687840_g29410_i0forward_frame_1 - 3 7.4 7.1 34 4.0 0.2 3.4 3 0 0 3 3 3 0 Major surface glycoprotein 2 C terminal GBP_repeat PF02526.14 NODE_36543_length_586_cov_472.067151_g29389_i0forward_frame_1 - 0.21 11.3 1.7 0.22 11.2 0.3 1.7 2 0 0 2 2 2 0 Glycophorin-binding protein TOM13 PF08219.11 NODE_36540_length_586_cov_991.575318_g29387_i0reverse_frame_1 - 0.028 14.4 0.1 0.053 13.5 0.1 1.4 1 0 0 1 1 1 0 Outer membrane protein TOM13 YajC PF02699.15 NODE_36540_length_586_cov_991.575318_g29387_i0forward_frame_1 - 2.2 8.2 8.4 16 5.4 3.2 2.4 2 0 0 2 2 2 0 Preprotein translocase subunit NS3_envE PF02723.14 NODE_36522_length_587_cov_4.333333_g29375_i0forward_frame_1 - 0.045 13.8 0.5 0.066 13.3 0.5 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E SpoIIP PF07454.11 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_1 - 0.0011 18.5 7.4 0.0016 17.9 7.4 1.3 1 0 0 1 1 1 1 Stage II sporulation protein P (SpoIIP) Vfa1 PF08432.10 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_1 - 0.66 10.3 23.9 0.93 9.8 23.9 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 CobT PF06213.12 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_1 - 0.8 9.0 11.5 1 8.7 11.5 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT CDC45 PF02724.14 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_1 - 1.1 7.5 22.0 1.3 7.2 22.0 1.1 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_1 - 2.4 7.9 15.2 3 7.6 15.2 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CLN3 PF02487.17 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_1 - 2.8 6.9 4.6 3.3 6.6 4.6 1.3 1 0 0 1 1 1 0 CLN3 protein Zip PF02535.22 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_1 - 2.8 7.1 8.9 3.2 6.9 8.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter SID-1_RNA_chan PF13965.6 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_1 - 5.5 5.3 6.4 6.4 5.1 6.4 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 PPR PF01535.20 NODE_36495_length_587_cov_150.184783_g29349_i0forward_frame_1 - 0.00015 21.8 0.0 0.17 12.2 0.0 2.6 2 0 0 2 2 2 2 PPR repeat LRR_8 PF13855.6 NODE_36469_length_588_cov_2.506329_g29327_i0reverse_frame_1 - 1.3e-12 47.3 16.0 0.00036 20.2 8.5 5.1 2 1 3 5 5 5 4 Leucine rich repeat LRR_4 PF12799.7 NODE_36469_length_588_cov_2.506329_g29327_i0reverse_frame_1 - 6.5e-12 45.5 19.9 9.4e-05 22.7 3.3 5.1 1 1 6 7 7 7 6 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 NODE_36469_length_588_cov_2.506329_g29327_i0reverse_frame_1 - 2.1e-07 30.6 8.0 0.0016 18.0 2.3 2.7 1 1 2 3 3 3 3 Leucine-rich repeat LRR_6 PF13516.6 NODE_36469_length_588_cov_2.506329_g29327_i0reverse_frame_1 - 1.5 9.1 0.1 1.5 9.1 0.1 5.0 7 0 0 7 7 7 0 Leucine Rich repeat AsmA_2 PF13502.6 NODE_36467_length_588_cov_2.895118_g29325_i0reverse_frame_1 - 1.2e-22 80.6 4.5 1.5e-22 80.3 4.5 1.0 1 0 0 1 1 1 1 AsmA-like C-terminal region AsmA PF05170.14 NODE_36467_length_588_cov_2.895118_g29325_i0reverse_frame_1 - 3.2e-15 56.0 1.1 3.9e-15 55.7 1.1 1.0 1 0 0 1 1 1 1 AsmA family T2SSM_b PF10741.9 NODE_36467_length_588_cov_2.895118_g29325_i0reverse_frame_1 - 0.017 14.9 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M subtype b HTH_36 PF13730.6 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 6.5e-08 32.4 0.0 1e-07 31.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.00018 21.4 0.1 0.00041 20.2 0.1 1.6 1 1 0 1 1 1 1 HTH domain DUF3782 PF12644.7 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.021 15.0 0.0 0.048 13.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3782) LexA_DNA_bind PF01726.16 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.063 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain Matrix PF00661.21 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.092 11.4 0.0 0.13 10.9 0.0 1.2 1 0 0 1 1 1 0 Viral matrix protein HTH_20 PF12840.7 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.15 12.2 0.0 0.33 11.0 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain VARLMGL PF14383.6 NODE_36447_length_588_cov_92.772152_g29305_i0forward_frame_1 - 0.13 11.8 0.0 0.21 11.1 0.0 1.4 1 0 0 1 1 1 0 DUF761-associated sequence motif DUF3136 PF11334.8 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_1 - 0.11 12.2 2.1 23 4.9 0.1 3.6 1 1 3 4 4 4 0 Protein of unknown function (DUF3136) Sp38 PF07354.12 NODE_36421_length_588_cov_282.479204_g29280_i0forward_frame_1 - 0.0033 16.9 25.0 1.1 8.7 5.1 4.2 1 1 3 4 4 4 4 Zona-pellucida-binding protein (Sp38) Acetyltransf_1 PF00583.25 NODE_36410_length_588_cov_830.831826_g29269_i0reverse_frame_1 - 4.9e-11 42.9 0.0 6.1e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 NODE_36410_length_588_cov_830.831826_g29269_i0reverse_frame_1 - 2.9e-08 33.7 0.0 5.4e-08 32.8 0.0 1.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_36410_length_588_cov_830.831826_g29269_i0reverse_frame_1 - 0.0011 18.8 0.1 0.0031 17.4 0.0 1.7 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_7 PF13508.7 NODE_36410_length_588_cov_830.831826_g29269_i0reverse_frame_1 - 0.0029 18.0 0.0 0.0047 17.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 NODE_36410_length_588_cov_830.831826_g29269_i0reverse_frame_1 - 0.069 12.8 0.0 0.096 12.4 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 NODE_36410_length_588_cov_830.831826_g29269_i0reverse_frame_1 - 0.07 13.8 0.0 0.087 13.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain SprT-like PF10263.9 NODE_36407_length_589_cov_1.983755_g29266_i0forward_frame_2 - 0.1 12.5 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 SprT-like family DUF945 PF06097.11 NODE_36403_length_589_cov_2.350181_g29262_i0reverse_frame_2 - 9.7e-48 163.4 10.5 1.1e-47 163.3 10.5 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF945) P5CR_dimer PF14748.6 NODE_36403_length_589_cov_2.350181_g29262_i0reverse_frame_2 - 0.0077 16.5 0.5 0.017 15.4 0.5 1.5 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation Methyltransf_1N PF02870.15 NODE_36403_length_589_cov_2.350181_g29262_i0reverse_frame_2 - 1.6 9.6 3.7 56 4.6 0.3 3.0 3 0 0 3 3 3 0 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CP12 PF02672.15 NODE_36366_length_589_cov_631.698556_g28451_i3reverse_frame_2 - 0.016 15.9 2.1 0.1 13.3 1.8 2.2 2 0 0 2 2 2 0 CP12 domain DUF948 PF06103.11 NODE_36366_length_589_cov_631.698556_g28451_i3reverse_frame_2 - 0.082 13.2 2.4 0.79 10.0 0.1 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) APG6_N PF17675.1 NODE_36366_length_589_cov_631.698556_g28451_i3reverse_frame_2 - 0.36 11.3 11.3 0.75 10.3 11.2 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region DivIC PF04977.15 NODE_36366_length_589_cov_631.698556_g28451_i3reverse_frame_2 - 0.45 10.3 8.6 0.41 10.5 3.0 2.4 2 0 0 2 2 2 0 Septum formation initiator CENP-H PF05837.12 NODE_36366_length_589_cov_631.698556_g28451_i3reverse_frame_2 - 1.1 9.7 12.1 0.13 12.7 5.1 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DUF848 PF05852.11 NODE_36366_length_589_cov_631.698556_g28451_i3reverse_frame_2 - 2.6 8.2 8.5 0.94 9.6 3.2 2.4 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) Phage_holin_3_6 PF07332.11 NODE_36365_length_589_cov_773.359206_g29229_i0forward_frame_2 - 0.002 18.1 1.9 0.0029 17.6 1.9 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III TMEM171 PF15471.6 NODE_36365_length_589_cov_773.359206_g29229_i0forward_frame_2 - 0.39 9.7 2.9 0.2 10.6 0.4 1.6 1 1 0 1 1 1 0 Transmembrane protein family 171 DUF308 PF03729.13 NODE_36365_length_589_cov_773.359206_g29229_i0forward_frame_2 - 0.42 11.0 14.1 0.89 9.9 14.1 1.5 1 0 0 1 1 1 0 Short repeat of unknown function (DUF308) SdpI PF13630.6 NODE_36365_length_589_cov_773.359206_g29229_i0forward_frame_2 - 0.79 9.9 7.8 1.6 8.9 7.8 1.5 1 0 0 1 1 1 0 SdpI/YhfL protein family Peptidase_C1 PF00112.23 NODE_36362_length_589_cov_1809.092058_g29226_i0forward_frame_3 - 6.4e-14 52.6 0.1 7.8e-14 52.3 0.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_36362_length_589_cov_1809.092058_g29226_i0forward_frame_3 - 0.00045 19.1 0.1 0.0011 17.8 0.0 1.5 2 0 0 2 2 2 1 Peptidase C1-like family Peptidase_C39_2 PF13529.6 NODE_36362_length_589_cov_1809.092058_g29226_i0forward_frame_3 - 0.0011 19.5 0.0 0.0018 18.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase_C39 like family PP2C PF00481.21 NODE_36356_length_590_cov_3.940541_g29221_i0forward_frame_3 - 1.7e-14 54.1 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Protein phosphatase 2C PI_PP_C PF18365.1 NODE_36356_length_590_cov_3.940541_g29221_i0forward_frame_3 - 0.04 13.9 0.2 0.07 13.1 0.2 1.4 1 0 0 1 1 1 0 Phosphoinositide phosphatase C-terminal domain UL42 PF17638.2 NODE_36353_length_590_cov_5.623423_g29218_i0forward_frame_2 - 0.11 12.4 0.5 0.16 11.9 0.5 1.2 1 0 0 1 1 1 0 HCMV UL42 Cpta_toxin PF07254.12 NODE_36353_length_590_cov_5.623423_g29218_i0forward_frame_2 - 0.18 11.8 1.1 0.29 11.1 1.1 1.3 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system Gram_pos_anchor PF00746.21 NODE_36335_length_590_cov_267.009009_g29202_i0reverse_frame_3 - 0.085 12.8 0.4 0.085 12.8 0.4 2.9 3 0 0 3 3 3 0 LPXTG cell wall anchor motif Pacifastin_I PF05375.13 NODE_36334_length_590_cov_274.929730_g29201_i0reverse_frame_2 - 0.5 10.1 7.8 0.58 9.9 1.9 2.4 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) LRR_6 PF13516.6 NODE_36323_length_591_cov_1.730216_g29190_i0reverse_frame_2 - 4.8e-12 44.9 15.1 0.043 13.9 0.6 6.4 6 0 0 6 6 6 6 Leucine Rich repeat LRR_1 PF00560.33 NODE_36323_length_591_cov_1.730216_g29190_i0reverse_frame_2 - 1.5e-05 24.9 11.4 0.43 11.3 0.8 5.6 5 1 0 5 5 5 2 Leucine Rich Repeat LRR_4 PF12799.7 NODE_36323_length_591_cov_1.730216_g29190_i0reverse_frame_2 - 0.0012 19.2 17.6 0.2 12.1 1.0 4.2 3 1 1 4 4 4 3 Leucine Rich repeats (2 copies) DUF5613 PF18467.1 NODE_36323_length_591_cov_1.730216_g29190_i0forward_frame_2 - 0.0035 17.7 0.2 0.0078 16.6 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5613) Invasin_D3 PF09134.10 NODE_36316_length_591_cov_3.478417_g29183_i0reverse_frame_3 - 5.3e-13 49.1 13.8 5.3e-10 39.5 0.4 2.2 2 0 0 2 2 2 2 Invasin, domain 3 Big_1 PF02369.16 NODE_36316_length_591_cov_3.478417_g29183_i0reverse_frame_3 - 0.0001 22.2 6.3 0.0001 22.2 6.3 4.0 3 2 1 4 4 4 2 Bacterial Ig-like domain (group 1) DUF2799 PF10973.8 NODE_36312_length_591_cov_4.658273_g29179_i0reverse_frame_2 - 0.0084 16.5 0.2 0.014 15.8 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2799) MEDS PF14417.6 NODE_36305_length_591_cov_60.233813_g29172_i0forward_frame_2 - 0.49 10.2 4.2 0.75 9.6 0.2 2.2 2 0 0 2 2 2 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain FAM76 PF16046.5 NODE_36305_length_591_cov_60.233813_g29172_i0forward_frame_2 - 2.2 7.5 16.5 2.9 7.2 16.5 1.0 1 0 0 1 1 1 0 FAM76 protein DIT1_PvcA PF05141.12 NODE_36305_length_591_cov_60.233813_g29172_i0forward_frame_2 - 4.6 6.6 10.5 2.7 7.4 8.4 1.5 1 1 1 2 2 2 0 Pyoverdine/dityrosine biosynthesis protein RE_XcyI PF09571.10 NODE_36301_length_591_cov_80.456835_g29168_i0reverse_frame_3 - 0.024 13.9 0.1 4.1 6.6 0.0 2.1 2 0 0 2 2 2 0 XcyI restriction endonuclease DUF5050 PF16472.5 NODE_36299_length_591_cov_84.503597_g29166_i0reverse_frame_3 - 0.0025 17.1 0.1 0.17 11.1 0.1 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF5050) Transmemb_17 PF09799.9 NODE_36281_length_591_cov_196.616906_g29150_i0reverse_frame_2 - 9e-15 55.2 3.7 9e-15 55.2 3.7 1.5 1 1 0 1 1 1 1 Predicted membrane protein CHORD PF04968.12 NODE_36280_length_591_cov_210.915468_g29149_i0reverse_frame_3 - 0.0049 17.6 1.6 0.011 16.4 0.1 2.1 2 0 0 2 2 2 1 CHORD SPRY PF00622.28 ORF98378 - 0.00068 19.7 0.0 0.0011 19.1 0.0 1.3 1 0 0 1 1 1 1 SPRY domain FKBP_C PF00254.28 ORF98255 - 1e-09 38.6 0.0 1.6e-09 38.0 0.0 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Fer4_7 PF12838.7 ORF96395 - 4.2e-08 33.6 4.5 7.4e-08 32.9 4.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 ORF96395 - 4.8e-07 29.3 10.8 7.2e-05 22.4 4.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 ORF96395 - 1.4e-05 25.1 3.5 2.4e-05 24.4 3.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF96395 - 5.4e-05 23.2 3.5 0.00011 22.3 3.5 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF96395 - 0.00036 20.8 1.3 0.00036 20.8 1.3 1.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 ORF96395 - 0.00098 19.1 2.8 0.00098 19.1 2.8 2.1 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 ORF96395 - 0.004 17.2 4.4 0.004 17.2 4.4 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 ORF96395 - 0.015 16.2 5.4 0.015 16.2 5.4 1.7 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 ORF96395 - 0.015 15.4 2.4 0.015 15.4 2.4 2.1 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF96395 - 0.016 15.7 5.7 0.059 13.8 5.7 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF96395 - 0.2 12.2 6.5 0.17 12.5 3.4 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 ORF96395 - 0.82 10.3 7.8 0.31 11.6 3.8 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I LAP1C PF05609.12 ORF95631 - 4 6.4 23.1 4.7 6.2 23.1 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) RNase_PH PF01138.21 ORF95408 - 1.8e-17 64.1 0.1 2.8e-17 63.4 0.1 1.4 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 ORF95408 - 0.0003 20.7 0.0 0.0006 19.8 0.0 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 DUF3856 PF12968.7 ORF95408 - 0.11 12.5 0.1 0.52 10.4 0.0 2.0 1 1 1 2 2 2 0 Domain of Unknown Function (DUF3856) Receptor_2B4 PF11465.8 ORF94712 - 0.22 11.7 3.4 0.33 11.2 2.8 1.5 1 1 0 1 1 1 0 Natural killer cell receptor 2B4 YabA PF06156.13 ORF94712 - 1.1 10.0 6.3 2 9.1 6.0 1.8 1 1 0 1 1 1 0 Initiation control protein YabA TRAM_LAG1_CLN8 PF03798.16 ORF93131 - 1.1e-06 28.5 7.8 2.2e-06 27.6 7.8 1.5 1 1 0 1 1 1 1 TLC domain DUF4116 PF13475.6 ORF92667 - 5.6e-12 45.2 0.0 2.7e-11 43.0 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4116) Neurochondrin PF05536.11 ORF91987 - 0.0041 15.6 0.1 0.0052 15.2 0.1 1.1 1 0 0 1 1 1 1 Neurochondrin Clavanin PF05452.11 ORF91987 - 0.0093 16.2 0.3 0.022 14.9 0.1 1.7 2 0 0 2 2 2 1 Clavanin Ribosomal_L27A PF00828.19 ORF91987 - 0.011 16.4 0.1 0.019 15.6 0.1 1.5 1 1 0 1 1 1 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Methyltransf_12 PF08242.12 ORF91987 - 0.062 14.0 1.2 0.32 11.8 0.0 2.6 2 1 0 2 2 2 0 Methyltransferase domain Flu_M1 PF00598.19 ORF91987 - 0.1 12.1 0.1 0.34 10.4 0.0 1.8 1 1 1 2 2 2 0 Influenza Matrix protein (M1) CTU2 PF10288.9 ORF90602 - 6 7.1 12.6 1.9e+02 2.3 12.6 2.6 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Sugar_tr PF00083.24 ORF89762 - 3.4e-44 151.5 4.9 3.7e-44 151.3 4.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF89762 - 2.6e-19 69.3 8.7 2.7e-19 69.3 8.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRI12 PF06609.13 ORF89762 - 0.0021 16.6 8.1 0.0024 16.4 8.1 1.0 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 ORF89762 - 0.0034 16.0 3.8 0.0034 16.0 3.8 1.6 1 1 0 1 1 1 1 MFS/sugar transport protein Phage_holin_3_2 PF04550.12 ORF89762 - 0.012 16.1 7.2 0.013 16.0 5.8 1.7 1 1 0 1 1 1 0 Phage holin family 2 Glycoprotein_B PF00606.18 ORF89762 - 0.09 12.2 0.1 0.13 11.7 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus Glycoprotein B ectodomain PAN_4 PF14295.6 ORF8826 - 0.0005 19.9 0.5 0.0005 19.9 0.5 2.7 2 0 0 2 2 2 1 PAN domain M-inducer_phosp PF06617.13 ORF87740 - 0.018 14.3 1.3 0.018 14.3 1.3 1.6 2 0 0 2 2 2 0 M-phase inducer phosphatase DUF4196 PF13846.6 ORF87740 - 0.031 14.5 1.8 0.05 13.8 1.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4196) Mito_fiss_reg PF05308.11 ORF87426 - 0.038 14.1 0.2 0.058 13.5 0.2 1.4 1 0 0 1 1 1 0 Mitochondrial fission regulator Fib_alpha PF08702.10 ORF87121 - 0.00027 21.1 15.4 0.00027 21.1 15.4 2.5 1 1 2 3 3 3 1 Fibrinogen alpha/beta chain family Lebercilin PF15619.6 ORF87121 - 0.00066 19.4 36.5 0.0021 17.8 36.5 1.9 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease PKcGMP_CC PF16808.5 ORF87121 - 0.00099 18.9 4.6 0.00099 18.9 4.6 5.5 6 0 0 6 6 5 1 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_TATA_bd PF12325.8 ORF87121 - 0.0057 16.9 33.9 0.7 10.1 17.7 3.4 1 1 2 3 3 3 2 TATA element modulatory factor 1 TATA binding Ribosomal_L10 PF00466.20 ORF87121 - 0.0064 16.6 6.8 0.0064 16.6 6.8 1.9 2 0 0 2 2 1 1 Ribosomal protein L10 MAD PF05557.13 ORF87121 - 0.019 13.4 37.4 0.066 11.6 37.4 1.7 1 1 0 1 1 1 0 Mitotic checkpoint protein Fez1 PF06818.15 ORF87121 - 0.061 13.8 32.2 0.24 11.8 11.6 2.3 1 1 1 2 2 2 0 Fez1 BLOC1_2 PF10046.9 ORF87121 - 0.087 13.1 31.5 0.095 13.0 10.5 3.6 1 1 4 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 UPF0242 PF06785.11 ORF87121 - 0.38 10.8 41.4 25 4.9 29.9 2.8 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus ERM PF00769.19 ORF87121 - 0.74 9.6 32.8 0.056 13.3 26.9 2.1 2 1 0 2 2 2 0 Ezrin/radixin/moesin family DUF641 PF04859.12 ORF87121 - 1.3 9.3 31.6 2.3 8.6 6.8 3.2 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) HOOK PF05622.12 ORF87121 - 1.4 6.9 37.1 2.5 6.1 37.1 1.4 1 1 0 1 1 1 0 HOOK protein Jnk-SapK_ap_N PF09744.9 ORF87121 - 2.3 8.5 36.0 6.8 6.9 21.1 2.4 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 ADIP PF11559.8 ORF87121 - 3.2 7.8 36.4 0.47 10.5 17.1 2.4 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding HAP1_N PF04849.13 ORF87121 - 4.3 6.5 34.3 54 2.8 34.3 2.3 1 1 0 1 1 1 0 HAP1 N-terminal conserved region MCPsignal PF00015.21 ORF87121 - 4.3 7.1 11.0 1.7 8.4 3.0 2.4 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF1664 PF07889.12 ORF87121 - 5.1 7.2 22.6 1.5 8.9 5.0 3.6 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) DUF4407 PF14362.6 ORF87121 - 5.6 6.2 21.5 4.8e+02 -0.1 21.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) P4Ha_N PF08336.11 ORF87121 - 6.3 6.8 25.9 0.44 10.6 7.3 3.3 2 1 0 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region NPV_P10 PF05531.12 ORF87121 - 6.3 7.3 16.5 55 4.3 1.7 4.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF948 PF06103.11 ORF87121 - 6.5 7.1 13.8 8.4 6.7 6.6 3.3 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) FAM76 PF16046.5 ORF87121 - 7.9 5.7 28.3 23 4.2 28.3 1.7 1 1 0 1 1 1 0 FAM76 protein SLATT_3 PF18184.1 ORF87121 - 8.2 6.5 6.9 1.7 8.8 0.4 2.5 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain 3 XLF PF09302.11 ORF87121 - 9 6.4 21.7 5.4 7.2 5.2 3.7 1 1 1 3 3 3 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component DUF812 PF05667.11 ORF87121 - 9.7 4.9 35.2 22 3.8 35.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Orf78 PF06024.12 ORF86120 - 0.043 14.1 6.1 0.089 13.1 6.1 1.4 1 0 0 1 1 1 0 Orf78 (ac78) DUF5401 PF17380.2 ORF86120 - 0.084 10.9 0.6 0.11 10.5 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) MRI PF15325.6 ORF84762 - 7 7.8 6.8 3.7 8.7 0.7 2.2 2 0 0 2 2 2 0 Modulator of retrovirus infection DUF4033 PF13225.6 ORF84559 - 6.3e-27 93.4 2.6 1e-26 92.7 2.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4033) Methyltransf_10 PF05971.12 ORF82710 - 0.19 11.0 1.4 0.22 10.8 1.4 1.1 1 0 0 1 1 1 0 RNA methyltransferase Nitroreductase PF00881.24 ORF81267 - 4e-14 53.0 0.0 6.8e-14 52.3 0.0 1.3 1 1 0 1 1 1 1 Nitroreductase family HMGL-like PF00682.19 ORF80690 - 1e-40 140.0 0.9 1.3e-40 139.7 0.9 1.1 1 0 0 1 1 1 1 HMGL-like DmpG_comm PF07836.11 ORF80690 - 1.8e-31 107.4 0.2 3.2e-31 106.7 0.2 1.4 1 0 0 1 1 1 1 DmpG-like communication domain Nop14 PF04147.12 ORF80487 - 4.3 5.4 23.5 4.6 5.3 23.5 1.0 1 0 0 1 1 1 0 Nop14-like family adh_short PF00106.25 ORF79118 - 1.9e-23 83.0 0.0 3e-23 82.3 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF79118 - 3e-15 56.4 0.0 4.3e-15 55.9 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.10 ORF79118 - 1.8e-06 27.6 0.1 2.9e-06 26.9 0.1 1.3 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) V-SNARE PF05008.15 ORF78516 - 2.5e-13 50.2 9.5 2.5e-13 50.2 9.5 2.8 2 1 0 3 3 3 1 Vesicle transport v-SNARE protein N-terminus Sec20 PF03908.13 ORF78516 - 6.5e-08 32.4 3.8 1.7e-06 27.8 0.0 2.8 2 2 1 3 3 3 1 Sec20 Laminin_I PF06008.14 ORF78516 - 0.00053 19.8 21.6 0.0048 16.6 8.5 2.1 2 0 0 2 2 2 2 Laminin Domain I ABC2_membrane_3 PF12698.7 ORF78516 - 0.0014 17.8 1.0 0.0019 17.4 1.0 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein DUF4755 PF15947.5 ORF78516 - 0.0052 16.8 3.0 0.0087 16.0 3.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4755) Strep_SA_rep PF06696.11 ORF78516 - 0.0054 16.7 1.0 0.016 15.2 1.0 1.9 1 0 0 1 1 1 1 Streptococcal surface antigen repeat V-SNARE_C PF12352.8 ORF78516 - 0.013 15.8 1.7 0.013 15.8 1.7 3.0 3 1 1 4 4 4 0 Snare region anchored in the vesicle membrane C-terminus DUF4600 PF15372.6 ORF78516 - 0.017 15.6 0.4 0.017 15.6 0.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4600) ACR_tran PF00873.19 ORF78516 - 0.14 9.8 7.1 0.16 9.6 7.1 1.1 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family PPR PF01535.20 ORF78516 - 0.91 9.9 4.9 1.1 9.6 0.5 3.1 3 0 0 3 3 3 0 PPR repeat ETRAMP PF09716.10 ORF78516 - 0.93 9.6 7.1 7.5 6.7 6.6 2.6 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) CCDC-167 PF15188.6 ORF78516 - 3.7 7.9 16.9 37 4.7 9.8 3.2 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF4398 PF14346.6 ORF78516 - 5.4 7.7 16.1 1.2 9.8 7.4 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4398) SRPRB PF09439.10 ORF78106 - 0.045 13.2 0.1 2.1 7.8 0.0 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit D123 PF07065.14 ORF78036 - 2.9e-47 161.3 3.3 3.5e-47 161.1 3.3 1.1 1 0 0 1 1 1 1 D123 RPW8 PF05659.11 ORF78036 - 0.022 14.5 0.8 0.097 12.4 0.0 2.0 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MRI PF15325.6 ORF77992 - 7 7.8 6.8 3.7 8.7 0.7 2.2 2 0 0 2 2 2 0 Modulator of retrovirus infection zf-RING_2 PF13639.6 ORF75855 - 3.7e-09 36.8 3.0 3.7e-09 36.8 3.0 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF75855 - 4e-08 33.0 2.1 4e-08 33.0 2.1 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF75855 - 1.5e-06 28.0 2.7 1.5e-06 28.0 2.7 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF75855 - 2.2e-05 24.1 3.8 4.4e-05 23.1 3.3 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-RING-like PF08746.11 ORF75855 - 2.9e-05 24.3 3.9 2.9e-05 24.3 3.9 2.2 2 0 0 2 2 2 1 RING-like domain zf-RING_UBOX PF13445.6 ORF75855 - 4.3e-05 23.4 2.7 4.3e-05 23.4 2.7 2.3 2 0 0 2 2 2 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF75855 - 4.8e-05 22.9 4.2 4.8e-05 22.9 4.2 2.1 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF75855 - 0.00017 21.5 3.2 0.00017 21.5 3.2 2.4 2 0 0 2 2 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF75855 - 0.00021 21.5 7.9 0.00021 21.5 7.9 2.9 2 1 0 2 2 2 1 RING-H2 zinc finger domain Prok-RING_1 PF14446.6 ORF75855 - 0.013 15.4 4.3 0.013 15.4 4.3 2.0 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-ANAPC11 PF12861.7 ORF75855 - 0.017 15.1 4.5 0.017 15.1 4.5 2.6 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger PHD PF00628.29 ORF75855 - 0.054 13.4 14.0 0.062 13.2 1.7 2.4 2 0 0 2 2 2 0 PHD-finger zf-Nse PF11789.8 ORF75855 - 0.075 12.9 2.3 0.14 12.0 2.3 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit EphA2_TM PF14575.6 ORF75855 - 0.22 12.4 0.7 0.46 11.4 0.7 1.6 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Zf_RING PF16744.5 ORF75855 - 2 8.6 12.4 0.66 10.1 5.2 2.3 2 0 0 2 2 2 0 KIAA1045 RING finger Prok-RING_4 PF14447.6 ORF75855 - 2.2 8.2 11.4 0.099 12.5 3.2 2.6 2 1 1 3 3 3 0 Prokaryotic RING finger family 4 CTP_transf_like PF01467.26 ORF7513 - 1.6e-15 57.6 0.0 1.9e-15 57.3 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like SRPRB PF09439.10 ORF751 - 0.045 13.2 0.1 2.1 7.8 0.0 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Hexose_dehydrat PF03559.14 ORF72407 - 0.092 12.2 0.2 0.17 11.3 0.2 1.4 1 1 0 1 1 1 0 NDP-hexose 2,3-dehydratase TFIIS_M PF07500.14 ORF71942 - 1.9e-05 25.1 0.0 2.6e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain TetR_C_31 PF17940.1 ORF71942 - 0.26 11.5 8.5 0.21 11.8 4.6 2.3 1 1 2 3 3 3 0 Tetracyclin repressor-like, C-terminal domain DUF1322 PF07032.11 ORF71773 - 0.0071 16.8 1.1 0.022 15.3 1.1 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1322) DUF1474 PF07342.11 ORF71773 - 0.41 11.2 4.8 1.9 9.0 0.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1474) VIT1 PF01988.19 ORF68651 - 2.8 7.7 7.2 7.2 6.4 4.9 2.0 2 0 0 2 2 2 0 VIT family MscS_porin PF12795.7 ORF6828 - 0.002 17.8 1.4 0.002 17.8 1.4 2.2 1 1 1 2 2 2 1 Mechanosensitive ion channel porin domain COG5 PF10392.9 ORF6828 - 0.01 16.0 5.2 0.12 12.5 1.1 2.5 2 1 0 2 2 2 0 Golgi transport complex subunit 5 Dynamin_M PF01031.20 ORF6828 - 0.018 14.3 4.9 0.21 10.7 0.3 2.1 1 1 1 2 2 2 0 Dynamin central region Laminin_II PF06009.12 ORF6828 - 0.023 14.7 9.9 0.072 13.1 1.8 2.3 1 1 1 2 2 2 0 Laminin Domain II HalX PF08663.10 ORF6828 - 0.043 14.1 1.9 0.043 14.1 1.9 3.0 3 1 0 3 3 2 0 HalX domain Lipoprotein_7 PF01540.16 ORF6828 - 0.046 13.0 1.7 0.1 11.8 1.7 1.4 1 1 0 1 1 1 0 Adhesin lipoprotein DUF3510 PF12022.8 ORF6828 - 0.05 14.0 0.8 0.11 12.9 0.2 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3510) CENP-O PF09496.10 ORF6828 - 0.054 13.5 1.6 0.074 13.0 1.6 1.2 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component DUF4407 PF14362.6 ORF6828 - 0.054 12.8 7.5 0.071 12.5 7.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Pilus_CpaD PF09476.10 ORF6828 - 0.058 13.1 1.0 0.072 12.8 1.0 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) Dehydratase_hem PF13816.6 ORF6828 - 0.073 12.5 0.1 0.09 12.2 0.1 1.2 1 0 0 1 1 1 0 Haem-containing dehydratase FapA PF03961.13 ORF6828 - 0.15 10.6 4.8 0.19 10.3 4.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Fib_alpha PF08702.10 ORF6828 - 0.19 11.9 5.9 0.38 10.9 5.6 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF848 PF05852.11 ORF6828 - 0.19 11.8 8.9 2.4 8.3 0.5 2.2 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) FUSC PF04632.12 ORF6828 - 0.21 10.1 2.0 0.27 9.7 2.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family MutL_C PF08676.11 ORF6828 - 0.29 10.9 8.1 0.45 10.3 8.1 1.3 1 0 0 1 1 1 0 MutL C terminal dimerisation domain Retrotran_gag_2 PF14223.6 ORF6828 - 0.29 10.8 2.2 0.48 10.1 1.9 1.5 1 1 0 1 1 1 0 gag-polypeptide of LTR copia-type OmpH PF03938.14 ORF6828 - 0.31 11.4 14.7 0.93 9.8 14.7 1.7 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF1993 PF09351.10 ORF6828 - 0.34 11.0 3.3 0.95 9.6 0.4 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF1993) U3_snoRNA_assoc PF08297.11 ORF6828 - 0.4 11.4 4.5 0.31 11.8 2.1 2.1 1 1 1 2 2 2 0 U3 snoRNA associated Spc7 PF08317.11 ORF6828 - 0.45 9.4 14.0 0.76 8.6 14.0 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein ATG16 PF08614.11 ORF6828 - 0.54 10.4 15.4 2 8.6 12.7 2.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF5082 PF16888.5 ORF6828 - 0.56 10.5 5.9 4.1 7.7 0.3 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) HrpB7 PF09486.10 ORF6828 - 0.77 10.1 9.5 7.4 6.9 2.7 2.3 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) YscO PF07321.12 ORF6828 - 1.5 8.7 16.1 2.5 8.1 3.0 2.5 2 1 0 2 2 2 0 Type III secretion protein YscO TMF_TATA_bd PF12325.8 ORF6828 - 1.9 8.8 13.8 0.57 10.4 9.4 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Noelin-1 PF12308.8 ORF6828 - 2 8.4 5.0 5.6 7.0 0.7 2.4 1 1 1 2 2 2 0 Neurogenesis glycoprotein Fez1 PF06818.15 ORF6828 - 3.6 8.0 13.6 4.3 7.7 6.1 2.1 1 1 1 2 2 2 0 Fez1 Syntaxin_2 PF14523.6 ORF6828 - 4.2 7.8 6.6 12 6.4 2.3 2.6 1 1 1 2 2 2 0 Syntaxin-like protein BLOC1_2 PF10046.9 ORF6828 - 5.6 7.3 9.2 9.1 6.7 1.3 2.5 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cauli_AT PF03233.13 ORF6828 - 5.9 6.8 5.3 13 5.6 0.3 2.2 2 0 0 2 2 2 0 Aphid transmission protein TMPIT PF07851.13 ORF6828 - 6.5 5.9 7.6 5.3 6.2 4.8 1.8 1 1 1 2 2 2 0 TMPIT-like protein FlaC_arch PF05377.11 ORF6828 - 8.9 6.8 7.9 28 5.2 1.2 3.2 2 2 1 3 3 3 0 Flagella accessory protein C (FlaC) Bact_lectin PF18483.1 ORF68072 - 0.00044 20.3 1.1 0.0006 19.9 1.1 1.2 1 0 0 1 1 1 1 Bacterial lectin DNA_pol_delta_4 PF04081.13 ORF68072 - 3.3 8.1 10.9 1 9.7 7.4 1.9 2 1 0 2 2 2 0 DNA polymerase delta, subunit 4 ATG16 PF08614.11 ORF65775 - 0.045 14.0 23.5 0.066 13.4 15.5 2.3 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 ORF65775 - 0.27 11.2 33.0 0.066 13.2 13.9 3.4 1 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding HAP1_N PF04849.13 ORF65775 - 1.3 8.2 27.8 1.9 7.6 27.8 1.3 1 1 0 1 1 1 0 HAP1 N-terminal conserved region Spc7 PF08317.11 ORF65775 - 1.4 7.8 28.7 0.36 9.6 19.9 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein FlaC_arch PF05377.11 ORF65775 - 2.2 8.7 15.0 1.8 9.1 2.8 3.8 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) DUF724 PF05266.14 ORF65775 - 4 7.2 19.6 3.2 7.5 7.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF724) Asp PF00026.23 ORF63975 - 1.2e-52 179.3 0.0 1.4e-52 179.1 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF63975 - 2.6e-06 27.3 0.0 3.9e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF63562 - 6.7e-05 22.5 0.0 9.2e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF63562 - 0.06 13.1 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal Plasmodium_Vir PF05795.11 ORF63562 - 0.077 12.4 0.2 0.089 12.2 0.2 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein MMR_HSR1_Xtn PF16897.5 ORF62724 - 2.3e-28 98.3 1.4 4.1e-28 97.5 1.4 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain TGS PF02824.21 ORF62724 - 3.3e-12 46.3 0.0 5.7e-12 45.5 0.0 1.4 1 0 0 1 1 1 1 TGS domain UPF0240 PF06784.11 ORF61432 - 0.077 13.0 0.5 0.11 12.6 0.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0240) PrmA PF06325.13 ORF59347 - 0.17 11.2 0.1 0.22 10.9 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Receptor_2B4 PF11465.8 ORF59320 - 0.22 11.7 3.4 0.33 11.2 2.8 1.5 1 1 0 1 1 1 0 Natural killer cell receptor 2B4 YabA PF06156.13 ORF59320 - 1.1 10.0 6.3 2 9.1 6.0 1.8 1 1 0 1 1 1 0 Initiation control protein YabA TPR_10 PF13374.6 ORF59041 - 7.4e-33 111.5 9.8 3.2e-13 49.1 0.4 5.0 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.6 ORF59041 - 6.1e-27 93.7 7.8 6.9e-13 48.7 0.5 3.2 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF59041 - 1e-07 31.4 5.6 0.022 14.8 0.3 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF59041 - 1.5e-06 27.8 1.8 0.0052 16.5 0.2 3.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF59041 - 3.3e-06 26.7 2.3 1.2e-05 24.8 0.9 1.9 1 1 1 2 2 2 1 MalT-like TPR region TPR_14 PF13428.6 ORF59041 - 7.5e-06 26.3 14.0 0.052 14.4 0.4 4.5 4 1 1 5 5 4 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF59041 - 8.5e-06 25.9 14.4 0.016 15.8 0.7 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_5 PF12688.7 ORF59041 - 3e-05 24.3 2.8 0.00033 20.9 1.3 2.6 2 1 1 3 3 3 1 Tetratrico peptide repeat TPR_2 PF07719.17 ORF59041 - 0.0001 22.1 9.5 0.018 15.2 0.5 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF59041 - 0.00068 19.6 2.0 0.46 10.8 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF59041 - 0.00094 19.8 10.4 0.11 13.1 0.4 4.1 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF59041 - 0.0023 18.2 0.4 34 5.1 0.0 3.9 3 1 0 3 3 3 0 Tetratricopeptide repeat EF-hand_9 PF14658.6 ORF59041 - 0.0033 17.7 0.0 0.0061 16.9 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain DUF4404 PF14357.6 ORF59041 - 0.0053 17.4 1.8 2.3 8.9 0.9 2.7 1 1 0 2 2 2 1 Domain of unknown function (DUF4404) TPR_3 PF07720.12 ORF59041 - 0.016 15.2 0.3 2.5 8.2 0.0 2.6 3 0 0 3 3 2 0 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF59041 - 0.037 13.4 1.8 7.5 5.9 0.4 2.8 1 1 0 2 2 2 0 Coatomer epsilon subunit DUF3632 PF12311.8 ORF59041 - 0.045 14.2 0.2 0.086 13.3 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3632) Phostensin_N PF13916.6 ORF59041 - 0.054 13.8 0.0 3.6 8.0 0.0 2.8 3 0 0 3 3 3 0 PP1-regulatory protein, Phostensin N-terminal TPR_19 PF14559.6 ORF59041 - 0.061 13.8 8.4 0.74 10.4 1.2 3.2 2 1 2 4 4 4 0 Tetratricopeptide repeat PrmC_N PF17827.1 ORF59041 - 0.062 13.9 2.5 4.6 7.9 0.4 2.7 1 1 0 2 2 2 0 PrmC N-terminal domain Mating_N PF12731.7 ORF59041 - 0.091 12.9 0.2 14 5.9 0.0 3.3 3 1 0 3 3 3 0 Mating-type protein beta 1 PXPV PF12778.7 ORF58931 - 0.00076 19.3 17.1 0.0059 16.5 0.5 3.2 3 0 0 3 3 3 2 PXPV repeat (3 copies) Rrn6 PF10214.9 ORF58931 - 0.026 13.0 1.6 0.027 13.0 1.6 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor VSP PF03302.13 ORF58931 - 0.097 11.5 0.2 0.12 11.2 0.2 1.1 1 0 0 1 1 1 0 Giardia variant-specific surface protein TFIIA PF03153.13 ORF58931 - 0.19 11.7 2.2 0.2 11.6 2.2 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Shisa PF13908.6 ORF58931 - 0.82 9.9 7.7 0.11 12.8 3.4 1.7 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator DUF3244 PF11589.8 ORF57176 - 0.035 14.2 0.3 1.9 8.6 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3244) EF-hand_1 PF00036.32 ORF57075 - 5e-08 31.9 0.1 0.002 17.5 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF57075 - 4.1e-05 24.0 0.5 9.3e-05 22.8 0.5 1.6 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF57075 - 9.1e-05 22.1 0.1 0.13 12.2 0.0 2.7 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF57075 - 0.00029 20.2 0.3 0.37 10.4 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF57075 - 0.0031 17.3 0.2 0.099 12.5 0.1 2.5 2 0 0 2 2 2 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF57075 - 0.12 12.7 0.0 0.63 10.4 0.0 1.9 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Ion_trans PF00520.31 ORF57075 - 0.15 11.2 0.8 0.21 10.8 0.8 1.1 1 0 0 1 1 1 0 Ion transport protein Phyto-Amp PF15438.6 ORF57075 - 0.18 11.6 0.2 0.25 11.2 0.2 1.3 1 0 0 1 1 1 0 Antigenic membrane protein of phytoplasma EF-hand_10 PF14788.6 ORF57075 - 0.18 11.7 0.5 1.2 9.0 0.0 2.2 1 1 1 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF57075 - 0.33 10.9 1.0 4.1 7.4 0.1 2.1 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand RseC_MucC PF04246.12 ORF54344 - 0.93 9.4 2.0 0.63 10.0 0.4 1.6 1 1 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC CLP1_N PF16573.5 ORF54140 - 6e-25 87.3 0.0 8.2e-25 86.9 0.0 1.2 1 0 0 1 1 1 1 N-terminal beta-sandwich domain of polyadenylation factor CLP1_P PF16575.5 ORF54140 - 2.2e-17 63.5 0.0 3.5e-17 62.8 0.0 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop ATP_bind_1 PF03029.17 ORF54140 - 0.00098 19.0 0.1 0.0034 17.2 0.0 1.8 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein MMR_HSR1 PF01926.23 ORF54140 - 0.0016 18.5 0.0 0.0029 17.7 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase KTI12 PF08433.10 ORF54140 - 0.0025 17.3 0.0 0.0041 16.6 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_18 PF13238.6 ORF54140 - 0.0043 17.6 0.0 0.012 16.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain FeoB_N PF02421.18 ORF54140 - 0.0051 16.3 0.0 0.043 13.4 0.0 2.0 2 0 0 2 2 2 1 Ferrous iron transport protein B AAA_24 PF13479.6 ORF54140 - 0.0093 15.7 0.0 0.02 14.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 ORF54140 - 0.021 14.2 0.0 0.038 13.3 0.0 1.3 1 0 0 1 1 1 0 KaiC AAA_10 PF12846.7 ORF54140 - 0.022 13.7 0.0 0.064 12.2 0.0 1.6 2 0 0 2 2 2 0 AAA-like domain G-alpha PF00503.20 ORF54140 - 0.023 13.8 0.0 0.036 13.2 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit RNA_helicase PF00910.22 ORF54140 - 0.027 14.9 0.1 0.12 12.8 0.0 2.0 2 0 0 2 2 2 0 RNA helicase FtsK_SpoIIIE PF01580.18 ORF54140 - 0.06 12.7 0.0 0.074 12.4 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family PduV-EutP PF10662.9 ORF54140 - 0.095 12.4 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 ORF54140 - 0.1 12.8 0.1 1.8 8.8 0.0 2.2 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_29 PF13555.6 ORF54140 - 0.13 12.0 0.1 0.41 10.4 0.0 1.8 1 1 1 2 2 2 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 ORF54140 - 0.15 11.3 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin DUF4047 PF13256.6 ORF5125 - 0.52 10.5 13.5 0.73 10.0 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) GATase PF00117.28 ORF51103 - 5.4e-18 65.4 0.0 6.6e-18 65.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 ORF51103 - 3.2e-06 27.1 0.0 0.00094 19.1 0.0 2.0 2 0 0 2 2 2 2 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 ORF51103 - 1.6e-05 24.8 0.5 0.017 14.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C26 GATase_3 PF07685.14 ORF51103 - 5.5e-05 22.8 0.0 7.5e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Sulfotransfer_4 PF17784.1 ORF50645 - 4.8e-33 114.8 0.4 6e-33 114.5 0.4 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Myb_DNA-bind_6 PF13921.6 ORF46124 - 7.9e-05 22.8 0.1 0.00046 20.4 0.0 2.4 2 2 1 3 3 3 1 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 ORF46124 - 0.048 13.9 0.0 0.1 12.8 0.0 1.7 1 0 0 1 1 1 0 Myb-like DNA-binding domain IGR PF09597.10 ORF46124 - 0.11 12.6 0.0 0.27 11.4 0.0 1.7 1 0 0 1 1 1 0 IGR protein motif zf-RING_2 PF13639.6 ORF44293 - 3.7e-09 36.8 3.0 3.7e-09 36.8 3.0 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF44293 - 4e-08 33.0 2.1 4e-08 33.0 2.1 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF44293 - 1.5e-06 28.0 2.7 1.5e-06 28.0 2.7 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF44293 - 2.2e-05 24.1 3.8 4.4e-05 23.1 3.3 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-RING-like PF08746.11 ORF44293 - 2.9e-05 24.3 3.9 2.9e-05 24.3 3.9 2.2 2 0 0 2 2 2 1 RING-like domain zf-RING_UBOX PF13445.6 ORF44293 - 4.3e-05 23.4 2.7 4.3e-05 23.4 2.7 2.3 2 0 0 2 2 2 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF44293 - 4.8e-05 22.9 4.2 4.8e-05 22.9 4.2 2.1 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF44293 - 0.00017 21.5 3.2 0.00017 21.5 3.2 2.4 2 0 0 2 2 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF44293 - 0.00021 21.5 7.9 0.00021 21.5 7.9 2.9 2 1 0 2 2 2 1 RING-H2 zinc finger domain Prok-RING_1 PF14446.6 ORF44293 - 0.013 15.4 4.3 0.013 15.4 4.3 2.0 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-ANAPC11 PF12861.7 ORF44293 - 0.017 15.1 4.5 0.017 15.1 4.5 2.6 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger PHD PF00628.29 ORF44293 - 0.054 13.4 14.0 0.062 13.2 1.7 2.4 2 0 0 2 2 2 0 PHD-finger zf-Nse PF11789.8 ORF44293 - 0.075 12.9 2.3 0.14 12.0 2.3 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit EphA2_TM PF14575.6 ORF44293 - 0.22 12.4 0.7 0.46 11.4 0.7 1.6 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Zf_RING PF16744.5 ORF44293 - 2 8.6 12.4 0.66 10.1 5.2 2.3 2 0 0 2 2 2 0 KIAA1045 RING finger Prok-RING_4 PF14447.6 ORF44293 - 2.2 8.2 11.4 0.099 12.5 3.2 2.6 2 1 1 3 3 3 0 Prokaryotic RING finger family 4 DUF2517 PF10725.9 ORF43205 - 0.066 13.0 0.1 0.21 11.4 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2517) Methyltransf_25 PF13649.6 ORF38919 - 1.8e-13 51.0 0.1 4.1e-13 49.8 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF38919 - 1.2e-12 48.3 0.1 9.7e-12 45.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF38919 - 1.1e-09 39.0 0.0 2.1e-09 38.0 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF38919 - 6.3e-09 35.8 0.0 8.9e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF38919 - 8.6e-08 32.2 0.0 1.1e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF38919 - 7.7e-05 22.4 0.0 0.0001 22.0 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) DUF4909 PF16253.5 ORF38919 - 0.0021 17.9 0.0 0.0036 17.1 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4909) Methyltransf_8 PF05148.15 ORF38919 - 0.019 14.9 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase DUF938 PF06080.12 ORF38919 - 0.03 14.1 0.0 0.055 13.2 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Aa_trans PF01490.18 ORF38858 - 1.7e-15 56.7 11.8 1.9e-15 56.5 11.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF805 PF05656.14 ORF38858 - 7.2 7.1 13.7 12 6.4 0.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF805) zf-C2HE PF16278.5 ORF38721 - 0.096 13.2 0.4 0.19 12.2 0.2 1.7 1 1 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger Asp PF00026.23 ORF3276 - 6.7e-05 22.5 0.0 9.2e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF3276 - 0.06 13.1 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal Plasmodium_Vir PF05795.11 ORF3276 - 0.077 12.4 0.2 0.089 12.2 0.2 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein Asp PF00026.23 ORF32591 - 6.7e-05 22.5 0.0 9.2e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF32591 - 0.06 13.1 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal Plasmodium_Vir PF05795.11 ORF32591 - 0.077 12.4 0.2 0.089 12.2 0.2 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein Ank_2 PF12796.7 ORF32432 - 5.7e-21 74.9 0.0 2.9e-10 40.6 0.0 2.5 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF32432 - 1.5e-15 57.3 5.3 7.4e-07 29.6 0.0 3.4 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF32432 - 3.2e-13 49.6 5.4 0.00012 22.3 0.0 3.7 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF32432 - 6.1e-11 41.5 2.6 0.028 14.9 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF32432 - 8.2e-09 35.5 8.5 0.0023 18.3 0.1 4.6 5 0 0 5 5 5 3 Ankyrin repeat ABC_membrane PF00664.23 ORF30051 - 3.3e-24 86.0 2.0 4.1e-24 85.7 2.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Mito_carr PF00153.27 ORF27599 - 9.7e-33 112.0 0.2 5.7e-17 61.4 0.0 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein Esterase PF00756.20 ORF2740 - 0.00053 19.7 0.1 0.00061 19.5 0.1 1.4 1 0 0 1 1 1 1 Putative esterase Esterase_phd PF10503.9 ORF2740 - 0.0085 15.6 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Esterase PHB depolymerase Peptidase_S9 PF00326.21 ORF2740 - 0.049 13.1 0.0 0.059 12.8 0.0 1.2 1 0 0 1 1 1 0 Prolyl oligopeptidase family COesterase PF00135.28 ORF2740 - 0.06 12.2 0.0 0.083 11.7 0.0 1.1 1 0 0 1 1 1 0 Carboxylesterase family Lipase_3 PF01764.25 ORF2740 - 0.15 11.9 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Lipase (class 3) Sugar_tr PF00083.24 ORF26621 - 7.6e-24 84.4 0.0 8.4e-24 84.2 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF3244 PF11589.8 ORF26180 - 0.035 14.2 0.3 1.9 8.6 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3244) DOT1 PF08123.13 ORF25880 - 1.2e-09 38.0 0.0 1.6e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Histone methylation protein DOT1 MTS PF05175.14 ORF25880 - 0.0081 15.7 0.0 0.026 14.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 ORF25880 - 0.014 15.2 0.0 0.02 14.7 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain ChuX_HutX PF06228.13 ORF25880 - 0.14 12.0 0.0 0.24 11.2 0.0 1.6 1 0 0 1 1 1 0 Haem utilisation ChuX/HutX Methyltransf_11 PF08241.12 ORF25880 - 0.14 12.8 0.0 2.2 9.0 0.0 2.4 2 1 0 2 2 2 0 Methyltransferase domain Methyltransf_25 PF13649.6 ORF25880 - 0.16 12.7 0.0 0.32 11.7 0.0 1.7 2 1 0 2 2 2 0 Methyltransferase domain Histone PF00125.24 ORF24752 - 2e-14 54.1 0.0 2.8e-14 53.6 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 ORF24752 - 6.6e-14 51.4 0.1 1.5e-13 50.2 0.1 1.6 1 0 0 1 1 1 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 ORF24752 - 1.4e-05 25.3 0.1 3.5e-05 24.0 0.0 1.7 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CDC45 PF02724.14 ORF24752 - 0.0051 15.2 2.3 0.0055 15.1 2.3 1.0 1 0 0 1 1 1 1 CDC45-like protein Nop14 PF04147.12 ORF24752 - 0.034 12.4 4.3 0.033 12.4 4.3 1.1 1 0 0 1 1 1 0 Nop14-like family TAFII28 PF04719.14 ORF24752 - 0.035 14.2 0.0 0.035 14.2 0.0 1.8 2 0 0 2 2 2 0 hTAFII28-like protein conserved region SDA1 PF05285.12 ORF24752 - 0.33 10.3 8.6 0.45 9.9 8.6 1.2 1 0 0 1 1 1 0 SDA1 PTPRCAP PF15713.5 ORF24752 - 4.9 7.4 13.1 7.6 6.8 13.1 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Roughex PF06020.11 ORF24752 - 8.2 5.4 11.2 10 5.1 11.2 1.1 1 0 0 1 1 1 0 Drosophila roughex protein Arf PF00025.21 ORF23970 - 4.3e-61 205.4 0.3 4.8e-61 205.2 0.3 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF23970 - 9.4e-16 57.8 0.0 1.2e-15 57.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF23970 - 3.2e-15 56.4 0.1 4.5e-15 55.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 ORF23970 - 3.9e-12 46.0 0.4 4.8e-09 35.8 0.2 2.1 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 ORF23970 - 7e-12 45.2 0.0 7.8e-12 45.1 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 ORF23970 - 2.6e-11 43.3 0.2 3.1e-11 43.1 0.2 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF23970 - 2.9e-08 33.8 0.1 4.7e-08 33.1 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF23970 - 0.00087 18.9 0.3 0.031 13.8 0.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF23970 - 0.0019 17.7 2.6 0.0066 16.0 2.6 1.8 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_33 PF13671.6 ORF23970 - 0.0076 16.4 0.0 0.01 16.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF23970 - 0.011 16.3 0.0 0.014 15.9 0.0 1.3 1 0 0 1 1 1 0 ABC transporter AAA_21 PF13304.6 ORF23970 - 0.012 15.4 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 ORF23970 - 0.023 14.4 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain MobB PF03205.14 ORF23970 - 0.027 14.3 0.0 0.041 13.8 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B TrkA_N PF02254.18 ORF23970 - 0.077 13.3 0.1 0.2 11.9 0.1 1.7 1 1 1 2 2 2 0 TrkA-N domain cobW PF02492.19 ORF23970 - 0.083 12.5 0.8 4.1 7.0 0.1 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 ORF23970 - 0.13 12.7 0.5 0.26 11.8 0.3 1.4 1 1 0 1 1 1 0 AAA domain Histone PF00125.24 ORF23450 - 2e-14 54.1 0.0 2.8e-14 53.6 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 ORF23450 - 6.6e-14 51.4 0.1 1.5e-13 50.2 0.1 1.6 1 0 0 1 1 1 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 ORF23450 - 1.4e-05 25.3 0.1 3.5e-05 24.0 0.0 1.7 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CDC45 PF02724.14 ORF23450 - 0.0051 15.2 2.3 0.0055 15.1 2.3 1.0 1 0 0 1 1 1 1 CDC45-like protein Nop14 PF04147.12 ORF23450 - 0.034 12.4 4.3 0.033 12.4 4.3 1.1 1 0 0 1 1 1 0 Nop14-like family TAFII28 PF04719.14 ORF23450 - 0.035 14.2 0.0 0.035 14.2 0.0 1.8 2 0 0 2 2 2 0 hTAFII28-like protein conserved region SDA1 PF05285.12 ORF23450 - 0.33 10.3 8.6 0.45 9.9 8.6 1.2 1 0 0 1 1 1 0 SDA1 PTPRCAP PF15713.5 ORF23450 - 4.9 7.4 13.1 7.6 6.8 13.1 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Roughex PF06020.11 ORF23450 - 8.2 5.4 11.2 10 5.1 11.2 1.1 1 0 0 1 1 1 0 Drosophila roughex protein Tir_receptor_M PF03549.14 ORF23175 - 0.03 14.7 0.4 0.073 13.4 0.0 1.9 2 1 0 2 2 2 0 Translocated intimin receptor (Tir) intimin-binding domain FeoB_Cyto PF17910.1 ORF23175 - 1.4 9.5 9.8 3.2 8.4 2.3 2.4 1 1 1 2 2 2 0 FeoB cytosolic helical domain ALMT PF11744.8 ORF23175 - 3.6 6.3 15.5 4.3 6.1 15.5 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Metallophos PF00149.28 ORF2250 - 1.2e-05 26.0 0.2 2e-05 25.2 0.2 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF2250 - 0.023 15.6 0.0 0.056 14.3 0.0 1.6 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C Acyl-CoA_dh_1 PF00441.24 ORF21874 - 4.7e-33 114.5 4.8 5.5e-33 114.3 4.8 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF21874 - 5.5e-11 42.9 6.2 7.4e-11 42.5 6.2 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain EF-hand_6 PF13405.6 ORF21231 - 5.1e-11 41.6 14.1 0.016 15.1 0.4 4.8 4 1 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF21231 - 1.1e-09 38.6 10.8 4.3e-07 30.3 1.3 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF21231 - 1.2e-09 37.8 7.5 4.4e-07 29.6 1.6 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF21231 - 2.6e-09 36.0 16.2 0.00068 19.0 0.5 4.8 4 2 0 4 4 4 3 EF hand EF-hand_5 PF13202.6 ORF21231 - 8.8e-08 31.3 7.1 0.00076 18.9 0.0 4.1 3 1 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF21231 - 0.043 14.1 1.0 1.8 8.9 0.3 2.6 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Glyco_hydro_11 PF00457.17 ORF21231 - 0.077 12.6 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 11 EF-hand_4 PF12763.7 ORF21231 - 0.087 12.8 3.6 0.14 12.1 0.4 2.6 2 2 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand CBM_25 PF03423.13 ORF21229 - 0.039 14.2 0.7 0.081 13.2 0.7 1.6 1 0 0 1 1 1 0 Carbohydrate binding domain (family 25) LCE6A PF15858.5 ORF20612 - 0.19 12.5 5.8 0.12 13.1 3.3 1.9 2 0 0 2 2 2 0 Late cornified envelope protein 6A family DUF4381 PF14316.6 ORF18698 - 0.016 15.4 0.1 0.016 15.4 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) DUF4834 PF16118.5 ORF18698 - 0.051 14.5 0.2 0.29 12.1 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) DUF3328 PF11807.8 ORF18698 - 0.12 12.1 0.2 0.36 10.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3328) Bestrophin PF01062.21 ORF17294 - 3.9e-12 46.2 0.0 5e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Asp PF00026.23 ORF15399 - 6.7e-05 22.5 0.0 9.2e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF15399 - 0.06 13.1 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal Plasmodium_Vir PF05795.11 ORF15399 - 0.077 12.4 0.2 0.089 12.2 0.2 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein CTU2 PF10288.9 ORF14994 - 6 7.1 12.6 1.9e+02 2.3 12.6 2.6 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Tim17 PF02466.19 ORF13986 - 4.1e-08 33.6 1.4 5.5e-08 33.2 1.4 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Orf78 PF06024.12 ORF13643 - 0.043 14.1 6.1 0.089 13.1 6.1 1.4 1 0 0 1 1 1 0 Orf78 (ac78) DUF5401 PF17380.2 ORF13643 - 0.084 10.9 0.6 0.11 10.5 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Hexose_dehydrat PF03559.14 ORF12193 - 0.092 12.2 0.2 0.17 11.3 0.2 1.4 1 1 0 1 1 1 0 NDP-hexose 2,3-dehydratase FeoB_associated PF12669.7 ORF11664 - 0.076 13.4 2.8 0.17 12.3 0.6 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein DUF4680 PF15730.5 ORF11287 - 1.7 9.0 9.8 0.048 14.0 2.7 1.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4680) CobA_CobO_BtuR PF02572.15 ORF111513 - 5.9e-61 205.7 0.0 7.5e-61 205.4 0.0 1.1 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Co_AT_N PF12557.8 ORF111513 - 3.1e-06 27.0 7.6 3.1e-06 27.0 7.6 2.2 3 0 0 3 3 3 1 Cob(I)alamin adenosyltransferase N terminal DUF3502 PF12010.8 ORF111513 - 0.017 15.8 0.0 0.029 15.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) ResIII PF04851.15 ORF111513 - 0.046 13.7 0.4 0.11 12.5 0.4 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Smr PF01713.21 ORF111513 - 0.048 14.0 0.3 1.6 9.1 0.0 2.3 2 0 0 2 2 2 0 Smr domain IstB_IS21 PF01695.17 ORF111513 - 0.13 12.0 0.2 3 7.5 0.1 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SSE PF00437.20 ORF111513 - 0.14 11.2 0.1 0.24 10.4 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein NADH-G_4Fe-4S_3 PF10588.9 ORF109960 - 0.029 13.9 0.5 0.066 12.8 0.5 1.6 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF2496 PF10689.9 ORF109451 - 0.086 12.6 0.1 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2496) Phage_NinH PF06322.11 ORF108766 - 0.14 12.1 0.2 0.3 11.0 0.2 1.5 1 0 0 1 1 1 0 Phage NinH protein UCR_Fe-S_N PF10399.9 ORF108766 - 5.6 6.4 6.5 13 5.2 6.5 1.7 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ASC PF00858.24 ORF108585 - 0.024 13.6 0.2 0.044 12.8 0.2 1.4 2 0 0 2 2 2 0 Amiloride-sensitive sodium channel Response_reg PF00072.24 ORF108225 - 1.8e-24 86.1 0.0 2.7e-24 85.5 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 ORF108225 - 4e-23 80.7 0.1 6.7e-23 80.0 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 ORF108225 - 4.1e-05 23.2 1.2 0.00012 21.6 0.1 2.3 3 0 0 3 3 3 1 Sigma-70, region 4 HTH_Tnp_ISL3 PF13542.6 ORF108225 - 5.2e-05 22.6 0.0 0.00012 21.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 ORF108225 - 0.00022 20.9 0.0 0.00047 19.9 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 ORF108225 - 0.00024 21.2 0.5 0.0007 19.7 0.0 2.1 2 1 0 2 2 1 1 Helix-turn-helix domain HTH_24 PF13412.6 ORF108225 - 0.0006 19.3 0.0 0.0014 18.1 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 ORF108225 - 0.0017 18.1 0.0 0.0039 16.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 ORF108225 - 0.0018 18.3 0.0 0.0049 16.9 0.0 1.8 1 1 0 1 1 1 1 Winged helix-turn helix Terminase_5 PF06056.12 ORF108225 - 0.0026 17.6 0.0 0.0047 16.8 0.0 1.4 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_Tnp_1 PF01527.20 ORF108225 - 0.0032 17.7 0.1 0.0067 16.7 0.1 1.5 1 0 0 1 1 1 1 Transposase HTH_40 PF14493.6 ORF108225 - 0.0036 17.7 0.0 0.0062 17.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 ORF108225 - 0.005 16.9 0.0 0.01 15.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_5 PF01022.20 ORF108225 - 0.0081 16.0 1.2 0.018 14.9 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Sigma70_r4 PF04545.16 ORF108225 - 0.012 15.2 0.2 0.042 13.4 0.2 1.9 1 1 0 1 1 1 0 Sigma-70, region 4 Sigma70_ECF PF07638.11 ORF108225 - 0.016 15.1 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 ECF sigma factor HTH_IclR PF09339.10 ORF108225 - 0.023 14.5 0.3 0.057 13.2 0.0 1.8 2 0 0 2 2 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 ORF108225 - 0.03 14.2 0.0 0.076 12.9 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_AsnC-type PF13404.6 ORF108225 - 0.04 13.8 0.0 0.11 12.4 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 ORF108225 - 0.05 13.7 0.0 0.11 12.6 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 ORF108225 - 0.07 12.9 0.1 0.28 11.0 0.1 2.1 1 1 0 1 1 1 0 HTH DNA binding domain HTH_11 PF08279.12 ORF108225 - 0.13 12.2 0.0 0.83 9.6 0.0 2.2 1 1 0 1 1 1 0 HTH domain Cadherin_2 PF08266.12 ORF108225 - 0.13 12.1 0.1 0.22 11.4 0.1 1.4 1 0 0 1 1 1 0 Cadherin-like HTH_AraC PF00165.23 ORF108225 - 0.15 12.2 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family TnsD PF15978.5 ORF108225 - 0.19 10.7 0.0 0.25 10.3 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D Jacalin PF01419.17 ORF106390 - 0.00083 19.3 0.1 0.0011 18.9 0.1 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain AIRS_C PF02769.22 ORF106333 - 3.7e-10 40.2 0.0 4.8e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Gar1 PF04410.14 ORF105268 - 2e-21 76.4 0.0 2.5e-21 76.1 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region His_Phos_1 PF00300.22 ORF104239 - 1.8e-17 63.7 0.0 8.3e-16 58.3 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) His_Phos_2 PF00328.22 ORF104239 - 0.0091 15.4 0.1 0.027 13.8 0.0 1.7 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 2) DUF2937 PF11157.8 ORF103572 - 0.0035 17.1 1.5 1.9 8.2 0.1 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF2937) TnpV PF14198.6 ORF103572 - 0.0057 16.6 3.0 0.26 11.3 0.2 2.2 1 1 1 2 2 2 2 Transposon-encoded protein TnpV FapA PF03961.13 ORF103572 - 0.021 13.5 2.8 0.024 13.3 2.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A ER PF01133.17 ORF103572 - 0.039 14.0 0.1 0.07 13.1 0.1 1.5 1 0 0 1 1 1 0 Enhancer of rudimentary BatD PF13584.6 ORF103572 - 0.07 11.9 0.2 0.089 11.6 0.2 1.1 1 0 0 1 1 1 0 Oxygen tolerance RmuC PF02646.16 ORF103572 - 0.12 11.5 5.3 0.1 11.7 1.5 2.2 1 1 0 2 2 2 0 RmuC family Tho2 PF11262.8 ORF103572 - 0.4 9.8 4.4 0.31 10.2 1.7 1.9 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 Allexi_40kDa PF05549.11 ORF103572 - 0.78 9.2 5.1 0.84 9.1 0.7 1.9 1 1 1 2 2 2 0 Allexivirus 40kDa protein PRKG1_interact PF15898.5 ORF103572 - 0.98 10.4 6.3 1 10.3 0.9 2.4 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain RCC1_2 PF13540.6 ORF103263 - 7.1e-10 38.4 8.1 0.0085 15.9 0.0 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat GRDA PF04723.14 ORF103263 - 0.056 13.2 0.0 8.7 6.1 0.0 2.4 1 1 1 2 2 2 0 Glycine reductase complex selenoprotein A Ank_5 PF13857.6 ORF10204 - 3.9e-22 78.0 4.3 1.7e-12 47.3 0.5 4.2 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF10204 - 1.3e-21 77.0 5.7 1e-15 58.0 0.8 2.9 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF10204 - 1.7e-15 57.1 1.0 3.3e-07 30.7 0.1 3.6 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF10204 - 3.1e-14 51.7 0.5 5.3e-05 23.3 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF10204 - 1.2e-13 50.8 4.8 3.6e-06 27.2 0.1 4.4 4 1 0 4 4 4 3 Ankyrin repeat Gar1 PF04410.14 ORF10119 - 2e-21 76.4 0.0 2.5e-21 76.1 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region zf-CCHC_4 PF14392.6 ORF100948 - 0.00013 21.6 4.4 0.12 12.2 0.6 2.3 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC PF00098.23 ORF100948 - 0.00019 21.4 8.2 0.0048 16.9 1.6 2.3 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF100948 - 0.012 15.3 10.4 0.14 11.9 1.8 2.3 2 0 0 2 2 2 0 C2H2 zinc-finger CRISPR_assoc PF08798.11 ORF100948 - 0.048 13.8 6.2 0.068 13.3 6.2 1.4 1 1 0 1 1 1 0 CRISPR associated protein Fer4_8 PF13183.6 ORF100948 - 0.34 11.4 6.0 0.29 11.6 1.4 2.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain zf-CCHC_6 PF15288.6 ORF100948 - 2.5 8.0 8.2 7.7 6.4 0.5 2.5 2 0 0 2 2 2 0 Zinc knuckle Gly-zipper_YMGG PF13441.6 NODE_36726_length_583_cov_2.687956_g29551_i0reverse_frame_1 - 0.00094 18.9 1.5 0.0014 18.3 1.5 1.2 1 0 0 1 1 1 1 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 NODE_36726_length_583_cov_2.687956_g29551_i0reverse_frame_1 - 0.073 12.9 9.4 0.11 12.4 9.4 1.2 1 0 0 1 1 1 0 Glycine zipper 2TM domain DUF5067 PF16729.5 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_1 - 0.041 13.8 1.1 0.075 13.0 0.8 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5067) CsgF PF10614.9 NODE_36713_length_583_cov_80.917883_g29538_i0forward_frame_1 - 3 8.1 12.0 0.075 13.2 3.6 2.1 1 1 1 2 2 2 0 Type VIII secretion system (T8SS), CsgF protein Helicase_PWI PF18149.1 NODE_36712_length_583_cov_89.012774_g29537_i0reverse_frame_1 - 0.16 12.2 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 N-terminal helicase PWI domain CdvA PF18822.1 NODE_36685_length_584_cov_2.664845_g29515_i0reverse_frame_1 - 0.64 9.9 5.6 0.32 10.8 0.3 2.3 2 1 0 2 2 2 0 CdvA-like coiled-coil domain Pkinase PF00069.25 NODE_36678_length_584_cov_3.409836_g29508_i0reverse_frame_1 - 4.3e-27 95.1 0.1 5.5e-27 94.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_36678_length_584_cov_3.409836_g29508_i0reverse_frame_1 - 2e-12 47.0 0.0 2.5e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase IGPS PF00218.21 NODE_36678_length_584_cov_3.409836_g29508_i0reverse_frame_1 - 0.024 13.8 0.0 0.041 13.1 0.0 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase FTA2 PF13095.6 NODE_36678_length_584_cov_3.409836_g29508_i0reverse_frame_1 - 0.047 13.3 0.0 0.7 9.5 0.0 2.1 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks103.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks103.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks103.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks103.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:46:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TRP PF06011.12 NODE_36670_length_584_cov_59.775956_g29500_i0forward_frame_1 - 0.018 13.8 9.5 0.027 13.2 9.5 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF4064 PF13273.6 NODE_36670_length_584_cov_59.775956_g29500_i0forward_frame_1 - 0.21 11.9 7.2 0.11 12.7 4.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) Peptidase_A24 PF01478.18 NODE_36669_length_584_cov_69.224044_g29499_i0reverse_frame_1 - 0.15 12.5 5.9 0.075 13.4 3.8 1.5 2 0 0 2 2 2 0 Type IV leader peptidase family CcmD PF04995.14 NODE_36606_length_585_cov_193.345455_g29442_i0forward_frame_1 - 0.05 13.7 3.4 0.086 12.9 3.4 1.4 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) p450 PF00067.22 NODE_36582_length_586_cov_1.662432_g29426_i0reverse_frame_3 - 4.2e-18 65.3 4.5 5.8e-18 64.9 4.5 1.2 1 0 0 1 1 1 1 Cytochrome P450 STAG PF08514.11 NODE_36582_length_586_cov_1.662432_g29426_i0reverse_frame_3 - 0.0034 17.3 0.6 0.0049 16.8 0.6 1.2 1 0 0 1 1 1 1 STAG domain Helicase_PWI PF18149.1 NODE_36582_length_586_cov_1.662432_g29426_i0reverse_frame_3 - 0.042 14.0 0.4 8.9 6.5 0.1 2.4 1 1 1 2 2 2 0 N-terminal helicase PWI domain RE_MjaI PF09568.10 NODE_36582_length_586_cov_1.662432_g29426_i0reverse_frame_3 - 0.043 13.6 0.3 0.073 12.9 0.3 1.5 1 0 0 1 1 1 0 MjaI restriction endonuclease NinB PF05772.12 NODE_36579_length_586_cov_3.130672_g29423_i0forward_frame_2 - 0.022 14.6 0.0 0.03 14.1 0.0 1.2 1 0 0 1 1 1 0 NinB protein Glyco_hydro_65m PF03632.15 NODE_36577_length_586_cov_13.239564_g29421_i0reverse_frame_3 - 0.0014 17.6 1.6 0.0017 17.3 1.6 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 65 central catalytic domain DUF1275 PF06912.11 NODE_36573_length_586_cov_62.439201_g29417_i0reverse_frame_2 - 0.32 10.9 5.5 0.55 10.1 5.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1275) Cytokin_check_N PF10407.9 NODE_36543_length_586_cov_472.067151_g29389_i0reverse_frame_3 - 0.046 13.7 0.7 0.09 12.7 0.1 1.7 2 0 0 2 2 2 0 Cdc14 phosphatase binding protein N-terminus DUF4547 PF15080.6 NODE_36535_length_586_cov_3160.702359_g29384_i0forward_frame_2 - 0.14 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4547) VPS9 PF02204.18 NODE_36526_length_587_cov_3.114130_g29379_i0forward_frame_2 - 1.1e-11 44.8 0.2 1.6e-11 44.3 0.2 1.3 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain NIR_SIR_ferr PF03460.17 NODE_36524_length_587_cov_3.242754_g29377_i0forward_frame_3 - 1.7e-13 50.2 0.0 2.8e-13 49.5 0.0 1.4 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain NIR_SIR PF01077.22 NODE_36524_length_587_cov_3.242754_g29377_i0forward_frame_3 - 1e-09 38.1 0.0 1.5e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain CFC PF09443.10 NODE_36522_length_587_cov_4.333333_g29375_i0reverse_frame_2 - 0.13 12.2 4.0 0.2 11.6 0.4 2.4 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) zf-C2H2 PF00096.26 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 8.3e-08 32.3 10.1 4.4e-06 26.9 2.8 2.7 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 1.9e-07 31.2 6.2 0.0026 18.1 0.6 2.5 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 5.2e-05 23.8 8.2 0.0083 16.9 2.1 3.0 2 0 0 2 2 2 2 C2H2-type zinc finger zf-Di19 PF05605.12 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.0099 16.2 5.3 0.36 11.2 5.3 2.5 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_11 PF16622.5 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.015 15.0 0.2 0.015 15.0 0.2 2.3 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-RING_7 PF02591.15 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.05 13.8 2.9 3.6 7.8 0.1 3.7 5 0 0 5 5 5 0 C4-type zinc ribbon domain zf-BED PF02892.15 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.051 13.6 6.0 0.12 12.4 1.1 2.4 1 1 1 2 2 2 0 BED zinc finger zf-C2HC_2 PF13913.6 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.57 10.1 6.7 5.9 6.9 0.4 2.6 2 1 0 2 2 2 0 zinc-finger of a C2HC-type zf-C2H2_jaz PF12171.8 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 2.2 8.7 7.1 2.3 8.6 1.4 2.6 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 2.6 8.6 6.8 15 6.1 1.0 2.7 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Elf1 PF05129.13 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 2.6 8.1 7.3 2.3 8.3 2.6 2.3 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like PTPRCAP PF15713.5 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_2 - 0.02 15.2 0.9 0.027 14.7 0.9 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Mago_nashi PF02792.14 NODE_36519_length_587_cov_39.514493_g29372_i0reverse_frame_2 - 0.6 10.2 5.6 0.86 9.7 5.5 1.4 1 1 0 1 1 1 0 Mago nashi protein RtcB PF01139.17 NODE_36515_length_587_cov_70.878623_g26517_i1reverse_frame_3 - 0.015 14.6 0.3 0.019 14.2 0.3 1.1 1 0 0 1 1 1 0 tRNA-splicing ligase RtcB Na_trans_assoc PF06512.13 NODE_36515_length_587_cov_70.878623_g26517_i1reverse_frame_3 - 1.5 9.1 15.9 2 8.6 15.9 1.3 1 0 0 1 1 1 0 Sodium ion transport-associated NPCC PF08058.11 NODE_36514_length_587_cov_76.068841_g29368_i0reverse_frame_2 - 0.73 9.9 4.6 2.1 8.4 4.6 1.8 1 1 0 1 1 1 0 Nuclear pore complex component OS-D PF03392.13 NODE_36514_length_587_cov_76.068841_g29368_i0forward_frame_3 - 0.0033 17.5 1.3 0.0074 16.4 1.3 1.6 1 0 0 1 1 1 1 Insect pheromone-binding family, A10/OS-D IL13 PF03487.13 NODE_36510_length_587_cov_83.516304_g29364_i0forward_frame_2 - 0.017 14.9 0.2 0.022 14.5 0.2 1.2 1 0 0 1 1 1 0 Interleukin-13 Lbh PF15317.6 NODE_36506_length_587_cov_94.960145_g29360_i0reverse_frame_3 - 0.1 13.5 1.0 15 6.5 0.4 2.2 2 0 0 2 2 2 0 Cardiac transcription factor regulator, Developmental protein Lig_chan PF00060.26 NODE_36506_length_587_cov_94.960145_g29360_i0forward_frame_2 - 0.76 9.6 4.6 1.7 8.5 4.6 1.7 1 1 0 1 1 1 0 Ligand-gated ion channel Ribosomal_L26 PF16906.5 NODE_36502_length_587_cov_114.829710_g29356_i0forward_frame_3 - 0.081 13.4 1.4 0.16 12.4 0.0 2.1 2 1 0 2 2 2 0 Ribosomal proteins L26 eukaryotic, L24P archaeal BDV_M PF16520.5 NODE_36502_length_587_cov_114.829710_g29356_i0forward_frame_2 - 0.014 15.7 0.1 0.022 15.1 0.1 1.3 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae LcrG PF07216.12 NODE_36495_length_587_cov_150.184783_g29349_i0reverse_frame_2 - 0.084 12.8 0.7 0.79 9.7 0.1 2.1 2 0 0 2 2 2 0 LcrG protein TaqI_C PF12950.7 NODE_36480_length_587_cov_625.913043_g29336_i0reverse_frame_2 - 0.019 15.0 1.9 0.048 13.7 1.9 1.7 1 1 0 1 1 1 0 TaqI-like C-terminal specificity domain SVIP PF15811.5 NODE_36479_length_587_cov_632.983696_g29335_i0forward_frame_2 - 0.00033 21.0 6.4 0.00056 20.3 6.4 1.3 1 0 0 1 1 1 1 Small VCP/p97-interacting protein TcpA PF05946.12 NODE_36470_length_588_cov_2.215190_g29328_i0reverse_frame_2 - 0.13 12.4 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Toxin-coregulated pilus subunit TcpA Pneumo_M2 PF07380.11 NODE_36469_length_588_cov_2.506329_g29327_i0forward_frame_2 - 0.058 13.7 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 Pneumovirus M2 protein DHHA1 PF02272.19 NODE_36459_length_588_cov_4.254973_g29317_i0reverse_frame_3 - 1.5e-23 83.7 0.0 1.9e-23 83.4 0.0 1.1 1 0 0 1 1 1 1 DHHA1 domain RecJ_OB PF17768.1 NODE_36459_length_588_cov_4.254973_g29317_i0reverse_frame_3 - 3e-08 33.9 0.0 5e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 RecJ OB domain SAP PF02037.27 NODE_36455_length_588_cov_72.678119_g29313_i0reverse_frame_2 - 0.00021 20.9 2.7 0.00045 19.9 1.3 2.2 1 1 1 2 2 2 1 SAP domain Armet PF10208.9 NODE_36455_length_588_cov_72.678119_g29313_i0reverse_frame_2 - 0.0016 18.4 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 Degradation arginine-rich protein for mis-folding YokU PF14122.6 NODE_36452_length_588_cov_81.045208_g29310_i0forward_frame_2 - 0.066 13.2 1.7 0.15 12.1 0.1 2.3 2 1 1 3 3 3 0 YokU-like protein, putative antitoxin RESP18 PF14948.6 NODE_36452_length_588_cov_81.045208_g29310_i0forward_frame_2 - 0.098 13.0 1.8 0.2 12.0 1.8 1.6 1 0 0 1 1 1 0 RESP18 domain AMP-binding PF00501.28 NODE_36444_length_588_cov_96.555154_g29302_i0reverse_frame_3 - 1.4e-14 53.6 0.0 1.6e-14 53.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme DUF998 PF06197.13 NODE_36444_length_588_cov_96.555154_g29302_i0reverse_frame_3 - 0.086 12.4 0.8 0.12 11.9 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF998) FNIP PF05725.12 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_3 - 4.2e-40 135.6 18.7 2.4e-12 46.8 0.2 4.6 3 1 0 4 4 4 4 FNIP Repeat LRR_5 PF13306.6 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_3 - 0.0012 18.8 0.7 0.18 11.7 0.1 2.1 1 1 1 2 2 2 2 BspA type Leucine rich repeat region (6 copies) W_rich_C PF07483.11 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_3 - 0.78 9.9 3.4 39 4.5 0.1 3.6 2 2 1 4 4 4 0 Tryptophan-rich Synechocystis species C-terminal domain Glyco_hydro_65C PF03633.15 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_3 - 1.1 9.3 5.7 38 4.3 0.0 4.8 6 0 0 6 6 6 0 Glycosyl hydrolase family 65, C-terminal domain FNIP PF05725.12 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_2 - 7.8e-08 32.4 0.1 1.5e-07 31.5 0.1 1.5 1 0 0 1 1 1 1 FNIP Repeat DUF4880 PF16220.5 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_2 - 0.054 13.4 7.4 6 6.8 0.1 4.5 5 0 0 5 5 5 0 Domain of unknown function (DUF4880) Peptidase_M16_C PF05193.21 NODE_36421_length_588_cov_282.479204_g29280_i0forward_frame_3 - 0.094 12.7 0.0 21 5.1 0.0 3.3 2 1 1 3 3 3 0 Peptidase M16 inactive domain DUF1476 PF07345.11 NODE_36421_length_588_cov_282.479204_g29280_i0forward_frame_3 - 0.11 12.9 6.4 48 4.4 0.1 5.1 2 2 4 6 6 6 0 ATPase inhibitor subunit zeta HalX PF08663.10 NODE_36421_length_588_cov_282.479204_g29280_i0forward_frame_2 - 0.0065 16.8 20.9 5.5 7.4 0.1 5.7 5 2 1 6 6 6 4 HalX domain TOH_N PF12549.8 NODE_36421_length_588_cov_282.479204_g29280_i0forward_frame_2 - 0.061 13.2 0.2 5.6 6.9 0.0 3.4 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal ACT PF01842.25 ORF99454 - 0.0062 16.3 0.1 0.015 15.1 0.1 1.7 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.6 ORF99454 - 0.01 15.6 0.0 0.023 14.5 0.0 1.6 1 0 0 1 1 1 0 ACT domain ACT_4 PF13291.6 ORF99454 - 0.024 15.2 0.1 0.064 13.9 0.0 1.7 2 0 0 2 2 2 0 ACT domain KxDL PF10241.9 ORF97934 - 0.012 15.9 4.8 0.15 12.3 0.0 2.9 3 0 0 3 3 3 0 Uncharacterized conserved protein HPPK PF01288.20 ORF97934 - 0.034 14.7 1.2 0.19 12.3 0.0 2.4 1 1 2 3 3 3 0 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Plasmodium_Vir PF05795.11 ORF95759 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF95759 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF95759 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF95759 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF95759 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF95759 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF95759 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF95759 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF95759 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF95759 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF95759 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF95759 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF95759 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF95759 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF95759 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF95759 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF95759 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF95759 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF95759 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF95759 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF95759 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF95759 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF95759 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF95759 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF95759 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF95759 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF95759 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF95759 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF95759 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF95759 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF95759 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF95759 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF95759 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 SusD-like_2 PF12771.7 ORF94485 - 0.0028 16.7 0.2 0.0035 16.3 0.2 1.2 1 0 0 1 1 1 1 Starch-binding associating with outer membrane TraC_F_IV PF11130.8 ORF94485 - 0.029 14.0 0.1 0.037 13.6 0.1 1.2 1 0 0 1 1 1 0 F pilus assembly Type-IV secretion system for plasmid transfer BRICHOS PF04089.14 ORF93724 - 0.019 15.2 0.7 0.035 14.3 0.6 1.5 1 1 0 1 1 1 0 BRICHOS domain FWWh PF14922.6 ORF93724 - 0.025 14.5 0.7 0.24 11.4 0.0 2.6 2 1 0 2 2 2 0 Protein of unknown function Ldh_1_N PF00056.23 ORF93724 - 0.09 12.9 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain Ham1p_like PF01725.16 ORF93194 - 5e-51 173.3 0.0 5.8e-51 173.1 0.0 1.0 1 0 0 1 1 1 1 Ham1 family adh_short_C2 PF13561.6 ORF9291 - 2.2e-41 142.0 0.0 3.5e-41 141.3 0.0 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF9291 - 5.1e-32 110.9 0.0 6.3e-32 110.6 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF9291 - 0.11 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 KR domain SAM_2 PF07647.17 ORF924 - 5e-12 45.7 0.2 1.2e-11 44.6 0.2 1.6 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_1 PF00536.30 ORF924 - 8.8e-11 42.1 0.2 1.4e-10 41.5 0.2 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Methyltransf_25 PF13649.6 ORF9132 - 1.9e-19 70.2 0.0 3e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF9132 - 5.8e-19 68.5 0.0 8.5e-19 68.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF9132 - 2.4e-15 56.6 0.0 3e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF9132 - 1.6e-13 50.9 0.0 2.1e-13 50.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF9132 - 2.5e-10 41.0 0.0 3.4e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF9132 - 3.2e-09 36.5 0.0 3.6e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 ORF9132 - 6.3e-06 25.8 0.0 8.6e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 ORF9132 - 1.2e-05 24.7 0.0 4.5e-05 22.9 0.0 1.7 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_PK PF05891.12 ORF9132 - 0.00066 19.3 0.0 0.00097 18.7 0.0 1.2 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Methyltransf_29 PF03141.16 ORF9132 - 0.0027 16.3 0.0 0.003 16.2 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_9 PF08003.11 ORF9132 - 0.013 14.5 0.0 0.014 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) MetW PF07021.12 ORF9132 - 0.034 13.7 0.0 0.086 12.4 0.0 1.6 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW PCMT PF01135.19 ORF9132 - 0.2 11.4 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FmrO PF07091.11 ORF9132 - 0.2 11.2 0.0 0.36 10.3 0.0 1.5 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) Plasmodium_Vir PF05795.11 ORF89557 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF89557 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF89557 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF89557 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF89557 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF89557 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF89557 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF89557 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF89557 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF89557 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF89557 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF89557 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF89557 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF89557 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF89557 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF89557 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF89557 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF89557 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF89557 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF89557 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF89557 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF89557 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF89557 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF89557 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF89557 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF89557 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF89557 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF89557 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF89557 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF89557 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF89557 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF89557 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF89557 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 Mod_r PF07200.13 ORF88865 - 0.0089 16.1 3.5 0.0089 16.1 3.5 1.7 1 1 1 2 2 2 1 Modifier of rudimentary (Mod(r)) protein 7tm_6 PF02949.20 ORF88437 - 0.0073 15.4 4.0 0.008 15.3 4.0 1.1 1 0 0 1 1 1 1 7tm Odorant receptor PROL5-SMR PF15621.6 ORF87715 - 0.084 13.4 0.0 0.3 11.6 0.0 1.8 2 0 0 2 2 2 0 Proline-rich submaxillary gland androgen-regulated family ACPS PF01648.20 ORF86993 - 1.7e-09 37.8 0.0 2.3e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily SUR7 PF06687.12 ORF86719 - 0.86 9.2 10.1 0.2 11.2 4.8 2.1 2 0 0 2 2 2 0 SUR7/PalI family Serglycin PF04360.12 ORF86107 - 8.9 6.3 8.5 17 5.3 8.4 1.5 1 1 0 1 1 1 0 Serglycin Ig_2 PF13895.6 ORF85324 - 0.059 13.7 0.0 0.09 13.1 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin domain Prefoldin PF02996.17 ORF85214 - 2.5e-26 92.0 0.2 4.1e-26 91.3 0.2 1.3 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 ORF85214 - 0.00039 20.3 0.1 0.21 11.6 0.0 2.4 2 0 0 2 2 2 2 Prefoldin subunit Dynactin PF12455.8 ORF85214 - 0.0066 15.7 1.0 0.56 9.4 0.1 2.1 2 0 0 2 2 2 2 Dynein associated protein End3 PF12761.7 ORF85214 - 0.011 15.9 0.7 0.054 13.7 0.3 2.1 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 Syntaxin-6_N PF09177.11 ORF85214 - 0.014 16.0 3.9 1.4 9.6 0.4 2.2 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF573 PF04504.14 ORF85214 - 0.062 14.0 1.1 2.7 8.7 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function, DUF573 EzrA PF06160.12 ORF85214 - 0.066 11.4 2.8 0.41 8.8 0.1 2.0 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA Phage_ABA_S PF18066.1 ORF85214 - 0.098 13.3 0.1 0.23 12.2 0.1 1.6 1 1 0 1 1 1 0 Phage ABA sandwich domain Muted PF14942.6 ORF85214 - 0.11 12.8 2.1 0.21 11.9 0.2 2.0 2 0 0 2 2 2 0 Organelle biogenesis, Muted-like protein COG2 PF06148.11 ORF85214 - 0.21 11.7 1.5 0.59 10.2 0.2 2.0 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 IBR PF01485.21 ORF85183 - 1.4e-05 25.2 10.1 1.4e-05 25.2 10.1 3.3 2 1 1 3 3 3 1 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF85183 - 0.00033 20.9 11.5 0.00033 20.9 11.5 2.3 2 0 0 2 2 2 2 Ring finger domain HoxA13_N PF12284.8 ORF85183 - 0.38 11.4 3.0 0.73 10.5 0.2 2.2 1 1 1 2 2 2 0 Hox protein A13 N terminal zf-ACC PF17848.1 ORF85183 - 1 9.5 13.9 6.2 7.0 4.7 3.6 3 1 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain DZR PF12773.7 ORF85183 - 9.5 6.3 34.8 1.9 8.6 3.2 4.2 2 2 3 5 5 5 0 Double zinc ribbon VipB PF05943.12 ORF84734 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF84734 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 EMP24_GP25L PF01105.24 ORF8394 - 2.2e-29 102.7 0.1 2.5e-29 102.5 0.1 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Serglycin PF04360.12 ORF83785 - 8.9 6.3 8.5 17 5.3 8.4 1.5 1 1 0 1 1 1 0 Serglycin Plasmodium_Vir PF05795.11 ORF83275 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF83275 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF83275 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF83275 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF83275 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF83275 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF83275 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF83275 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF83275 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF83275 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF83275 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF83275 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF83275 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF83275 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF83275 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF83275 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF83275 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF83275 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF83275 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF83275 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF83275 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF83275 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF83275 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF83275 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF83275 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF83275 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF83275 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF83275 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF83275 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF83275 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF83275 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF83275 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF83275 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 Pkinase PF00069.25 ORF81027 - 2.5e-50 171.3 0.6 2.8e-50 171.1 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF81027 - 5.6e-33 114.3 0.1 6.3e-33 114.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF81027 - 6.1e-06 25.3 0.0 1.1e-05 24.5 0.0 1.4 2 0 0 2 2 2 1 Fungal protein kinase Kinase-like PF14531.6 ORF81027 - 8.7e-06 25.3 0.1 2.8e-05 23.6 0.1 1.8 1 1 0 1 1 1 1 Kinase-like FTA2 PF13095.6 ORF81027 - 0.00019 21.2 1.9 0.085 12.5 0.3 2.1 1 1 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF81027 - 0.00095 18.2 0.5 0.0014 17.7 0.5 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF81027 - 0.0056 16.0 0.0 0.0068 15.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF81027 - 0.006 16.2 0.3 0.011 15.4 0.3 1.4 1 1 0 1 1 1 1 RIO1 family EBV-NA3 PF05009.12 ORF79862 - 0.03 13.8 0.0 2.5 7.6 0.1 2.1 2 0 0 2 2 2 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) Pkinase PF00069.25 ORF78150 - 2.5e-50 171.3 0.6 2.8e-50 171.1 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78150 - 5.6e-33 114.3 0.1 6.3e-33 114.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF78150 - 6.1e-06 25.3 0.0 1.1e-05 24.5 0.0 1.4 2 0 0 2 2 2 1 Fungal protein kinase Kinase-like PF14531.6 ORF78150 - 8.7e-06 25.3 0.1 2.8e-05 23.6 0.1 1.8 1 1 0 1 1 1 1 Kinase-like FTA2 PF13095.6 ORF78150 - 0.00019 21.2 1.9 0.085 12.5 0.3 2.1 1 1 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF78150 - 0.00095 18.2 0.5 0.0014 17.7 0.5 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF78150 - 0.0056 16.0 0.0 0.0068 15.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF78150 - 0.006 16.2 0.3 0.011 15.4 0.3 1.4 1 1 0 1 1 1 1 RIO1 family VipB PF05943.12 ORF77515 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF77515 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 N_methyl PF07963.12 ORF75580 - 2.1e-09 36.5 1.0 3.5e-09 35.8 1.0 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif T2SSJ PF11612.8 ORF75580 - 2.1e-07 31.3 0.7 2.1e-06 28.0 0.7 2.2 1 1 0 1 1 1 1 Type II secretion system (T2SS), protein J DUF4525 PF15027.6 ORF75580 - 0.02 14.6 0.0 0.032 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) Col_cuticle_N PF01484.17 ORF75580 - 0.041 13.9 0.6 0.069 13.2 0.6 1.4 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain Rhomboid PF01694.22 ORF74111 - 8.4e-24 84.3 10.0 8.4e-24 84.3 10.0 1.5 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.10 ORF74111 - 0.019 15.5 0.7 0.063 13.9 0.0 2.2 3 0 0 3 3 3 0 Eukaryotic integral membrane protein (DUF1751) 7TM-7TMR_HD PF07698.11 ORF74111 - 4.6 6.9 8.0 1.1 9.0 4.2 1.9 2 1 0 2 2 2 0 7TM receptor with intracellular HD hydrolase Plasmodium_Vir PF05795.11 ORF73030 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF73030 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF73030 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF73030 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF73030 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF73030 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF73030 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF73030 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF73030 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF73030 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF73030 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF73030 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF73030 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF73030 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF73030 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF73030 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF73030 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF73030 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF73030 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF73030 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF73030 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF73030 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF73030 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF73030 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF73030 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF73030 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF73030 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF73030 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF73030 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF73030 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF73030 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF73030 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF73030 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 PqiA PF04403.13 ORF72900 - 0.00011 22.0 9.6 0.00015 21.6 9.6 1.2 1 0 0 1 1 1 1 Paraquat-inducible protein A UPF0114 PF03350.16 ORF72900 - 0.084 13.1 5.0 0.13 12.5 5.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 UPF0139 PF03669.13 ORF72900 - 0.78 9.7 5.2 0.098 12.5 0.6 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) VKOR PF07884.14 ORF72900 - 1.4 9.2 8.4 0.81 9.9 6.3 1.7 1 1 1 2 2 2 0 Vitamin K epoxide reductase family TPR_1 PF00515.28 ORF71691 - 6.8e-11 41.5 8.7 2.6e-06 27.0 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF71691 - 1.7e-07 31.4 1.7 5.3e-07 29.8 0.2 2.4 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF71691 - 2.9e-07 30.1 6.2 0.014 15.5 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF71691 - 8.4e-07 28.6 0.0 0.027 14.5 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF71691 - 0.00011 21.8 5.1 0.0034 17.0 0.0 3.2 3 1 1 4 4 4 1 TPR repeat TPR_16 PF13432.6 ORF71691 - 0.00059 20.4 0.0 0.0077 16.9 0.0 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF71691 - 0.0015 18.4 3.4 0.32 10.9 0.0 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF71691 - 0.0021 18.6 4.4 1.1 10.1 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_21 PF09976.9 ORF71691 - 0.0025 17.5 1.5 0.0046 16.7 1.5 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat-like domain TPR_19 PF14559.6 ORF71691 - 0.0068 16.9 1.4 0.034 14.7 0.1 2.6 2 1 1 3 3 3 1 Tetratricopeptide repeat DUF262 PF03235.14 ORF71691 - 0.036 14.2 1.3 0.045 13.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF262 TPR_14 PF13428.6 ORF71691 - 0.057 14.3 0.0 8.8 7.5 0.0 2.7 2 1 1 3 3 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF71691 - 0.059 13.6 8.5 0.56 10.6 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF71691 - 0.1 13.0 2.9 3.4 8.3 0.8 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat zf-RING_2 PF13639.6 ORF71487 - 4.5e-10 39.7 12.3 4.5e-10 39.7 12.3 2.0 3 0 0 3 3 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF71487 - 5.4e-08 32.5 5.7 1.4e-07 31.1 5.7 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF71487 - 9.8e-07 28.7 5.3 9.8e-07 28.7 5.3 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF71487 - 1.2e-05 25.2 8.4 2e-05 24.4 7.5 1.9 1 1 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF71487 - 1.8e-05 24.6 7.7 0.00014 21.8 7.7 2.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF71487 - 0.0001 22.5 9.8 0.0001 22.5 9.8 2.1 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF71487 - 0.00015 21.6 8.6 0.00042 20.1 8.6 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF71487 - 0.00024 20.9 11.3 0.00076 19.3 11.3 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF71487 - 0.00028 20.7 8.9 0.00078 19.3 8.9 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF71487 - 0.0016 18.3 2.6 0.0016 18.3 2.6 2.5 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF71487 - 0.0077 16.0 13.0 0.4 10.5 9.8 2.5 2 0 0 2 2 2 2 RING/Ubox like zinc-binding domain Vps39_2 PF10367.9 ORF71487 - 0.017 15.5 0.6 0.017 15.5 0.6 2.0 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 DnaJ PF00226.31 ORF7080 - 1.1e-19 70.3 0.5 3e-19 68.9 0.2 1.8 2 0 0 2 2 2 1 DnaJ domain Laminin_G_2 PF02210.24 ORF69505 - 0.058 14.0 0.1 0.088 13.4 0.1 1.4 1 0 0 1 1 1 0 Laminin G domain 53-BP1_Tudor PF09038.10 ORF69505 - 0.086 12.8 0.1 0.25 11.3 0.1 1.9 2 0 0 2 2 2 0 Tumour suppressor p53-binding protein-1 Tudor Psb28 PF03912.14 ORF69144 - 0.22 11.8 0.5 2 8.8 0.0 2.4 1 1 2 3 3 3 0 Psb28 protein DUF229 PF02995.17 ORF68162 - 1.6e-08 33.6 3.7 9.4e-08 31.1 3.7 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF229) DUF835 PF05763.12 ORF68162 - 0.022 14.5 0.4 0.031 14.0 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF835) zf-RING_2 PF13639.6 ORF67205 - 7.6e-10 39.0 11.6 7.6e-10 39.0 11.6 2.7 2 1 1 3 3 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF67205 - 2.1e-06 27.3 4.6 2.1e-06 27.3 4.6 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF67205 - 4.6e-06 26.6 4.4 4.6e-06 26.6 4.4 2.4 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF67205 - 8.7e-05 22.3 11.4 8.7e-05 22.3 11.4 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF67205 - 9.8e-05 22.1 11.5 9.8e-05 22.1 11.5 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF67205 - 0.001 19.3 16.1 0.001 19.3 16.1 2.5 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF67205 - 0.0014 18.6 7.3 0.0014 18.6 7.3 2.0 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF67205 - 0.002 18.0 10.5 0.002 18.0 10.5 2.6 2 1 0 2 2 2 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF67205 - 0.0085 15.9 10.4 0.0085 15.9 10.4 2.6 2 1 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF67205 - 0.021 14.6 10.1 0.021 14.6 10.1 2.1 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain DUF2304 PF10066.9 ORF67205 - 0.096 12.9 3.4 0.18 12.1 3.4 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) DUF4191 PF13829.6 ORF67205 - 0.48 9.7 2.8 0.66 9.3 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) zf-C3HC4_4 PF15227.6 ORF67205 - 4.7 7.5 19.5 0.42 10.8 12.0 2.7 2 1 1 3 3 3 0 zinc finger of C3HC4-type, RING SCIMP PF15050.6 ORF67167 - 0.13 12.7 8.1 2.6 8.5 0.1 2.2 2 0 0 2 2 2 0 SCIMP protein EamA PF00892.20 ORF66936 - 1.2e-10 41.7 17.3 1.2e-10 41.7 17.3 1.9 2 0 0 2 2 2 1 EamA-like transporter family DUF760 PF05542.11 ORF65619 - 1.2e-06 28.8 1.8 2.3e-06 27.9 0.3 2.1 2 1 0 2 2 2 1 Protein of unknown function (DUF760) IBR PF01485.21 ORF64848 - 2.3e-05 24.5 11.7 2.3e-05 24.5 11.7 2.3 1 1 1 2 2 2 1 IBR domain, a half RING-finger domain DAGAT PF03982.13 ORF64659 - 4.9e-21 74.9 0.0 6.8e-21 74.4 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol acyltransferase DnaJ PF00226.31 ORF62048 - 1.1e-09 38.3 0.2 1.1e-09 38.3 0.2 2.0 2 0 0 2 2 2 1 DnaJ domain Kei1 PF08552.11 ORF62048 - 0.25 11.2 2.8 0.33 10.8 2.2 1.4 1 1 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 DUF327 PF03885.13 ORF62048 - 0.79 9.7 11.9 0.9 9.5 11.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF327) Exonuc_VII_L PF02601.15 ORF62048 - 1 8.9 5.7 1.2 8.7 5.7 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Molybdop_Fe4S4 PF04879.16 ORF58885 - 2.3e-19 69.1 0.3 4.3e-19 68.3 0.1 1.6 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain Molybdopterin PF00384.22 ORF58885 - 2.3e-06 26.8 0.0 2.8e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase TAT_signal PF10518.9 ORF58885 - 0.00069 19.3 2.1 0.0019 18.0 2.1 1.8 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Rieske_3 PF18465.1 ORF58885 - 0.022 15.0 0.7 0.54 10.5 0.6 2.6 2 1 1 3 3 3 0 Rieske 3Fe-4S DUF229 PF02995.17 ORF58796 - 1.8e-17 63.1 5.8 2.2e-17 62.8 5.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF58796 - 1.2e-05 24.9 0.4 1.6e-05 24.5 0.4 1.2 1 0 0 1 1 1 1 Sulfatase zf-RING_2 PF13639.6 ORF5838 - 4.5e-10 39.7 12.3 4.5e-10 39.7 12.3 2.0 3 0 0 3 3 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF5838 - 5.4e-08 32.5 5.7 1.4e-07 31.1 5.7 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF5838 - 9.8e-07 28.7 5.3 9.8e-07 28.7 5.3 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF5838 - 1.2e-05 25.2 8.4 2e-05 24.4 7.5 1.9 1 1 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF5838 - 1.8e-05 24.6 7.7 0.00014 21.8 7.7 2.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF5838 - 0.0001 22.5 9.8 0.0001 22.5 9.8 2.1 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF5838 - 0.00015 21.6 8.6 0.00042 20.1 8.6 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF5838 - 0.00024 20.9 11.3 0.00076 19.3 11.3 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF5838 - 0.00028 20.7 8.9 0.00078 19.3 8.9 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF5838 - 0.0016 18.3 2.6 0.0016 18.3 2.6 2.5 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF5838 - 0.0077 16.0 13.0 0.4 10.5 9.8 2.5 2 0 0 2 2 2 2 RING/Ubox like zinc-binding domain Vps39_2 PF10367.9 ORF5838 - 0.017 15.5 0.6 0.017 15.5 0.6 2.0 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 PROL5-SMR PF15621.6 ORF58265 - 0.084 13.4 0.0 0.3 11.6 0.0 1.8 2 0 0 2 2 2 0 Proline-rich submaxillary gland androgen-regulated family DASH_Dam1 PF08653.10 ORF57575 - 0.19 11.6 0.2 3.4 7.5 0.0 2.4 2 0 0 2 2 2 0 DASH complex subunit Dam1 Plasmodium_Vir PF05795.11 ORF55557 - 0.00095 18.7 1.9 0.0012 18.3 1.9 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF55557 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF55557 - 0.0082 16.4 0.0 0.25 11.7 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) CDC45 PF02724.14 ORF55557 - 0.014 13.8 13.8 0.016 13.6 13.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Serinc PF03348.15 ORF55557 - 0.023 13.6 3.9 0.19 10.6 3.9 1.9 1 1 0 1 1 1 0 Serine incorporator (Serinc) BSMAP PF12280.8 ORF55557 - 0.031 14.5 4.7 0.057 13.6 4.6 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein RR_TM4-6 PF06459.12 ORF55557 - 0.033 14.0 15.8 0.042 13.7 15.8 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Hid1 PF12722.7 ORF55557 - 0.038 12.1 5.7 0.041 12.0 5.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein LAP1C PF05609.12 ORF55557 - 0.067 12.3 8.6 0.08 12.0 8.6 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) TRP PF06011.12 ORF55557 - 0.084 11.6 0.0 0.13 11.0 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel SLC12 PF03522.15 ORF55557 - 0.086 11.8 6.0 0.09 11.8 6.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 DUF913 PF06025.12 ORF55557 - 0.12 11.4 4.2 0.15 11.1 4.2 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) CSG2 PF16965.5 ORF55557 - 0.12 11.3 3.8 0.21 10.5 3.8 1.5 1 1 0 1 1 1 0 Ceramide synthase regulator DUF2207 PF09972.9 ORF55557 - 0.19 10.5 5.4 0.1 11.3 2.3 2.1 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) GWT1 PF06423.12 ORF55557 - 0.19 11.8 3.1 1.1 9.4 3.1 2.0 1 1 0 1 1 1 0 GWT1 DDHD PF02862.17 ORF55557 - 0.21 11.7 1.4 0.25 11.5 1.4 1.3 1 0 0 1 1 1 0 DDHD domain DUF2828 PF11443.8 ORF55557 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) FAM60A PF15396.6 ORF55557 - 0.24 11.4 3.3 0.29 11.1 3.3 1.2 1 0 0 1 1 1 0 Protein Family FAM60A CENP-N PF05238.13 ORF55557 - 0.33 10.2 6.3 0.37 10.1 6.3 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like ALMT PF11744.8 ORF55557 - 0.33 9.7 6.5 0.49 9.2 6.5 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter OppC_N PF12911.7 ORF55557 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C Connexin PF00029.19 ORF55557 - 0.35 10.6 11.0 2.6 7.7 11.0 2.0 1 1 0 1 1 1 0 Connexin DUF2052 PF09747.9 ORF55557 - 0.38 10.9 23.0 0.49 10.5 23.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Peptidase_U57 PF05582.12 ORF55557 - 0.42 9.8 4.7 0.54 9.5 4.7 1.1 1 0 0 1 1 1 0 YabG peptidase U57 Tho2 PF11262.8 ORF55557 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 SAPS PF04499.15 ORF55557 - 0.66 8.7 11.4 0.81 8.4 11.4 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Borrelia_P83 PF05262.11 ORF55557 - 0.73 8.3 14.5 0.74 8.2 14.5 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein PA26 PF04636.13 ORF55557 - 0.83 8.5 6.4 0.96 8.3 6.4 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) V_ATPase_I PF01496.19 ORF55557 - 1.2 7.0 11.0 1.5 6.7 11.0 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CCSAP PF15748.5 ORF55557 - 1.6 8.8 14.3 2 8.5 14.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated SID-1_RNA_chan PF13965.6 ORF55557 - 1.6 7.0 8.4 2.6 6.4 8.4 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 DUF4045 PF13254.6 ORF55557 - 1.7 8.2 13.9 2 7.9 13.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) CLN3 PF02487.17 ORF55557 - 1.8 7.5 6.9 2.8 6.9 6.8 1.5 1 1 0 1 1 1 0 CLN3 protein NPR3 PF03666.13 ORF55557 - 3.3 6.4 11.8 4.2 6.1 11.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 SDA1 PF05285.12 ORF55557 - 3.7 6.9 35.0 4.7 6.5 35.0 1.1 1 0 0 1 1 1 0 SDA1 ECM1 PF05782.11 ORF55557 - 6.7 5.5 14.0 8.1 5.2 14.0 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) Vfa1 PF08432.10 ORF55557 - 9.4 6.5 21.1 13 6.0 21.1 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DnaJ PF00226.31 ORF55451 - 1.1e-09 38.3 0.2 1.1e-09 38.3 0.2 2.0 2 0 0 2 2 2 1 DnaJ domain Kei1 PF08552.11 ORF55451 - 0.25 11.2 2.8 0.33 10.8 2.2 1.4 1 1 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 DUF327 PF03885.13 ORF55451 - 0.79 9.7 11.9 0.9 9.5 11.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF327) Exonuc_VII_L PF02601.15 ORF55451 - 1 8.9 5.7 1.2 8.7 5.7 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit MRJP PF03022.16 ORF54652 - 0.029 13.7 0.1 0.051 12.9 0.1 1.3 1 0 0 1 1 1 0 Major royal jelly protein Serglycin PF04360.12 ORF52879 - 8.9 6.3 8.5 17 5.3 8.4 1.5 1 1 0 1 1 1 0 Serglycin DUF2400 PF09674.10 ORF52557 - 0.23 11.4 3.7 0.28 11.2 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) eIF_4EBP PF05456.11 ORF52260 - 2.7 7.9 7.7 6.7 6.7 6.2 2.4 2 1 0 2 2 2 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Cys_rich_CPCC PF14206.6 ORF52237 - 0.15 11.9 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 Cysteine-rich CPCC EMP24_GP25L PF01105.24 ORF50783 - 2.2e-29 102.7 0.1 2.5e-29 102.5 0.1 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD PPR_2 PF13041.6 ORF50454 - 5.4e-11 42.5 0.0 4.6e-08 33.1 0.0 2.7 1 1 2 3 3 3 2 PPR repeat family PPR PF01535.20 ORF50454 - 1.8e-07 30.9 1.9 7.3e-05 22.8 0.3 3.1 3 0 0 3 3 3 2 PPR repeat TPR_19 PF14559.6 ORF50454 - 0.057 13.9 0.2 0.12 12.9 0.2 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4446 PF14584.6 ORF50303 - 2.7 7.9 4.9 14 5.6 1.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) VipB PF05943.12 ORF46 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF46 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 Molybdop_Fe4S4 PF04879.16 ORF437 - 2.3e-19 69.1 0.3 4.3e-19 68.3 0.1 1.6 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain Molybdopterin PF00384.22 ORF437 - 2.3e-06 26.8 0.0 2.8e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase TAT_signal PF10518.9 ORF437 - 0.00069 19.3 2.1 0.0019 18.0 2.1 1.8 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Rieske_3 PF18465.1 ORF437 - 0.022 15.0 0.7 0.54 10.5 0.6 2.6 2 1 1 3 3 3 0 Rieske 3Fe-4S CitMHS PF03600.16 ORF41683 - 0.077 12.2 13.5 0.13 11.4 13.5 1.4 1 1 0 1 1 1 0 Citrate transporter MoCF_biosynth PF00994.24 ORF40236 - 5.2e-28 97.5 0.0 6.4e-28 97.2 0.0 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain Rhabdo_M2 PF04785.12 ORF38857 - 0.17 11.2 0.0 0.26 10.6 0.0 1.3 1 0 0 1 1 1 0 Rhabdovirus matrix protein M2 Ank_2 PF12796.7 ORF35916 - 1.4e-25 89.6 0.4 1e-11 45.3 0.0 2.8 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF35916 - 1.9e-23 81.8 4.8 4.4e-09 36.4 0.1 4.1 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF35916 - 3.8e-23 81.2 1.5 2.5e-08 34.0 0.0 3.3 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF35916 - 7.5e-23 80.6 6.0 3.2e-08 33.9 0.1 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF35916 - 1.5e-20 71.1 2.5 7.5e-07 29.0 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat ENT PF03735.14 ORF35916 - 0.0084 16.2 0.0 0.032 14.3 0.0 1.8 2 0 0 2 2 2 1 ENT domain PBP1_TM PF14812.6 ORF34357 - 0.0017 18.7 0.0 0.003 17.9 0.0 1.4 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Saf_2TM PF18303.1 ORF34357 - 0.071 12.7 1.1 0.46 10.1 0.0 2.1 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain DUF2207 PF09972.9 ORF34357 - 0.077 11.7 0.1 0.12 11.1 0.1 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2663 PF10864.8 ORF34357 - 0.11 12.9 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF4064 PF13273.6 ORF34357 - 0.64 10.3 4.1 1.5 9.2 4.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) DUF616 PF04765.13 ORF33858 - 0.23 10.7 0.0 0.32 10.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF616) Carbam_trans_C PF16861.5 ORF31531 - 1.3e-54 184.3 0.0 1.6e-54 184.0 0.0 1.0 1 0 0 1 1 1 1 Carbamoyltransferase C-terminus Sua5_yciO_yrdC PF01300.18 ORF31531 - 3e-05 23.6 0.0 8.4e-05 22.1 0.0 1.7 2 0 0 2 2 2 1 Telomere recombination LRR_6 PF13516.6 ORF31228 - 0.0044 17.0 0.0 0.17 12.0 0.0 2.9 3 0 0 3 3 3 1 Leucine Rich repeat LRR_1 PF00560.33 ORF31228 - 0.0059 17.0 0.3 15 6.6 0.1 3.8 4 1 0 4 4 4 2 Leucine Rich Repeat Serglycin PF04360.12 ORF308 - 8.9 6.3 8.5 17 5.3 8.4 1.5 1 1 0 1 1 1 0 Serglycin TPR_1 PF00515.28 ORF29136 - 6.8e-11 41.5 8.7 2.6e-06 27.0 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF29136 - 1.7e-07 31.4 1.7 5.3e-07 29.8 0.2 2.4 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF29136 - 2.9e-07 30.1 6.2 0.014 15.5 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF29136 - 8.4e-07 28.6 0.0 0.027 14.5 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF29136 - 0.00011 21.8 5.1 0.0034 17.0 0.0 3.2 3 1 1 4 4 4 1 TPR repeat TPR_16 PF13432.6 ORF29136 - 0.00059 20.4 0.0 0.0077 16.9 0.0 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF29136 - 0.0015 18.4 3.4 0.32 10.9 0.0 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF29136 - 0.0021 18.6 4.4 1.1 10.1 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_21 PF09976.9 ORF29136 - 0.0025 17.5 1.5 0.0046 16.7 1.5 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat-like domain TPR_19 PF14559.6 ORF29136 - 0.0068 16.9 1.4 0.034 14.7 0.1 2.6 2 1 1 3 3 3 1 Tetratricopeptide repeat DUF262 PF03235.14 ORF29136 - 0.036 14.2 1.3 0.045 13.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF262 TPR_14 PF13428.6 ORF29136 - 0.057 14.3 0.0 8.8 7.5 0.0 2.7 2 1 1 3 3 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF29136 - 0.059 13.6 8.5 0.56 10.6 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF29136 - 0.1 13.0 2.9 3.4 8.3 0.8 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat Ank_5 PF13857.6 ORF27735 - 1.3e-11 44.4 0.2 8.7e-06 25.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF27735 - 8.8e-09 35.7 0.1 0.019 15.6 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF27735 - 1e-05 25.5 0.3 1.1 10.1 0.0 4.0 4 0 0 4 4 4 2 Ankyrin repeat Ank_2 PF12796.7 ORF27735 - 1.6e-05 25.4 0.0 0.02 15.5 0.0 2.7 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF27735 - 0.013 15.9 1.5 1.3 9.6 0.0 3.4 2 1 0 2 2 2 0 Ankyrin repeat DUF3642 PF12182.8 ORF26469 - 0.079 13.2 0.5 0.079 13.2 0.5 2.1 2 1 0 2 2 2 0 Bacterial lipoprotein CLN3 PF02487.17 ORF26469 - 0.096 11.7 2.2 0.13 11.3 2.2 1.2 1 0 0 1 1 1 0 CLN3 protein Macoilin PF09726.9 ORF26469 - 0.22 10.0 11.0 0.26 9.8 11.0 1.0 1 0 0 1 1 1 0 Macoilin family PRC2_HTH_1 PF18118.1 ORF26469 - 3.4 8.5 14.9 9.9 7.0 14.9 2.0 1 1 0 1 1 1 0 Polycomb repressive complex 2 tri-helical domain Plasmodium_Vir PF05795.11 ORF23596 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF23596 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF23596 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF23596 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF23596 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF23596 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF23596 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF23596 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF23596 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF23596 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF23596 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF23596 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF23596 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF23596 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF23596 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF23596 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF23596 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF23596 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF23596 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF23596 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF23596 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF23596 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF23596 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF23596 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF23596 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF23596 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF23596 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF23596 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF23596 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF23596 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF23596 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF23596 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF23596 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 SDH_C PF18317.1 ORF23431 - 0.076 12.8 0.1 6 6.7 0.0 2.3 2 0 0 2 2 2 0 Shikimate 5'-dehydrogenase C-terminal domain MscS_TM PF12794.7 ORF23037 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 Plasmodium_Vir PF05795.11 ORF23037 - 0.0026 17.3 2.7 0.0033 16.9 2.7 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein SID-1_RNA_chan PF13965.6 ORF23037 - 0.0041 15.6 0.4 0.0063 15.0 0.4 1.2 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 DUF4064 PF13273.6 ORF23037 - 0.01 16.1 0.0 0.26 11.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) DUF2207 PF09972.9 ORF23037 - 0.015 14.1 0.3 0.015 14.1 0.3 2.1 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) BSMAP PF12280.8 ORF23037 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF23037 - 0.039 13.1 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF23037 - 0.045 12.7 5.2 0.46 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) TRP PF06011.12 ORF23037 - 0.053 12.2 0.0 0.078 11.7 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel Hid1 PF12722.7 ORF23037 - 0.056 11.6 7.0 0.061 11.5 7.0 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF23037 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 GWT1 PF06423.12 ORF23037 - 0.077 13.1 2.2 0.45 10.6 2.2 2.0 1 1 0 1 1 1 0 GWT1 CDC45 PF02724.14 ORF23037 - 0.077 11.3 16.4 0.085 11.1 16.4 1.1 1 0 0 1 1 1 0 CDC45-like protein CSG2 PF16965.5 ORF23037 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator OppC_N PF12911.7 ORF23037 - 0.12 12.3 4.1 2 8.5 2.2 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C SLC12 PF03522.15 ORF23037 - 0.16 11.0 7.4 0.17 10.9 7.4 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF23037 - 0.17 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF23037 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) FAM60A PF15396.6 ORF23037 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF23037 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Borrelia_P83 PF05262.11 ORF23037 - 0.49 8.8 15.7 0.54 8.7 15.7 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein ALMT PF11744.8 ORF23037 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter CENP-N PF05238.13 ORF23037 - 0.72 9.1 8.3 0.9 8.8 8.3 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like V_ATPase_I PF01496.19 ORF23037 - 0.81 7.5 10.8 1 7.2 10.8 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family SAPS PF04499.15 ORF23037 - 0.83 8.4 11.7 1 8.1 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein PA26 PF04636.13 ORF23037 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) CLN3 PF02487.17 ORF23037 - 1.7 7.6 7.0 2.7 6.9 7.0 1.5 1 1 0 1 1 1 0 CLN3 protein Nop14 PF04147.12 ORF23037 - 1.9 6.6 30.6 2.3 6.3 30.6 1.0 1 0 0 1 1 1 0 Nop14-like family DUF4045 PF13254.6 ORF23037 - 3.5 7.2 15.1 4.2 6.9 15.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) CCSAP PF15748.5 ORF23037 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF23037 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF23037 - 4.5 5.9 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Vma12 PF11712.8 ORF23037 - 6.5 6.8 5.8 0.61 10.1 0.9 1.8 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase SDA1 PF05285.12 ORF23037 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 DUF2370 PF10176.9 ORF23037 - 8.2 6.0 6.6 51 3.4 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) EF-hand_7 PF13499.6 ORF22739 - 7.4e-18 64.8 1.2 7.9e-08 32.7 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF22739 - 1.8e-15 55.4 0.2 8.7e-05 22.2 0.1 4.2 4 0 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF22739 - 3e-13 48.3 0.0 0.0012 18.3 0.0 4.4 4 1 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF22739 - 9.2e-09 35.0 0.3 0.0003 20.6 0.0 2.7 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF22739 - 6e-05 23.3 0.2 0.6 10.5 0.0 2.5 2 1 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF22739 - 0.015 14.8 0.1 0.082 12.4 0.0 2.3 2 0 0 2 2 2 0 EF hand EF-hand_11 PF08976.11 ORF22739 - 0.016 16.1 0.1 1.7 9.6 0.1 2.2 1 1 1 2 2 2 0 EF-hand domain TerB PF05099.13 ORF22739 - 0.016 15.1 0.1 3.5 7.6 0.0 2.4 3 0 0 3 3 3 0 Tellurite resistance protein TerB GPHH PF16905.5 ORF22739 - 0.029 14.1 0.0 0.27 11.0 0.0 2.4 3 0 0 3 3 3 0 Voltage-dependent L-type calcium channel, IQ-associated SPARC_Ca_bdg PF10591.9 ORF22739 - 0.04 14.2 0.0 3.7 7.9 0.0 2.1 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region FtsH_ext PF06480.15 ORF22739 - 0.093 13.1 0.1 0.28 11.5 0.1 1.8 2 1 0 2 2 2 0 FtsH Extracellular CSD PF00313.22 ORF22621 - 0.00048 19.9 1.3 0.0011 18.8 1.3 1.6 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF22621 - 0.00079 19.1 0.1 0.0015 18.1 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain CSD2 PF17876.1 ORF22621 - 0.039 14.1 0.0 0.079 13.1 0.0 1.5 1 0 0 1 1 1 0 Cold shock domain SH3BP5 PF05276.14 ORF22621 - 0.56 10.0 3.6 2.8 7.7 3.6 1.8 1 1 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) EMP24_GP25L PF01105.24 ORF19196 - 2.2e-29 102.7 0.1 2.5e-29 102.5 0.1 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD SPOR PF05036.13 ORF18443 - 1.3e-17 63.9 0.6 5.7e-17 61.9 0.0 2.1 2 0 0 2 2 2 1 Sporulation related domain DUF4551 PF15087.6 ORF18443 - 0.17 10.7 9.5 0.18 10.6 9.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) FAM60A PF15396.6 ORF18443 - 0.78 9.7 4.4 1.1 9.2 4.4 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Presenilin PF01080.17 ORF18443 - 5.4 5.7 10.9 5.5 5.6 10.9 1.1 1 0 0 1 1 1 0 Presenilin TFIIA PF03153.13 ORF18443 - 6.2 6.7 25.3 6.5 6.6 25.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit VipB PF05943.12 ORF18233 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF18233 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 CLLAC PF15675.5 ORF17309 - 0.17 11.5 0.1 0.33 10.5 0.1 1.5 1 0 0 1 1 1 0 CLLAC-motif containing domain MFS_1 PF07690.16 ORF16796 - 1.1e-10 40.9 8.4 1.2e-10 40.8 8.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF16796 - 0.00018 20.5 5.7 0.00024 20.1 5.7 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 ORF16796 - 0.0079 15.1 4.3 0.0098 14.8 4.3 1.1 1 0 0 1 1 1 1 MFS_1 like family VipB PF05943.12 ORF15608 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF15608 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 CS PF04969.16 ORF14108 - 2.1e-07 31.8 0.0 3.5e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 CS domain Lin-8 PF03353.15 ORF14098 - 0.14 11.7 0.8 0.19 11.3 0.6 1.3 1 1 0 1 1 1 0 Ras-mediated vulval-induction antagonist VipB PF05943.12 ORF11951 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF11951 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 GSG-1 PF07803.11 ORF111739 - 0.062 13.2 0.2 1.3 9.0 0.1 2.3 2 1 0 2 2 2 0 GSG1-like protein CRISPR_Cas6 PF10040.9 ORF11129 - 0.063 13.9 0.0 0.16 12.7 0.0 1.6 1 1 0 1 1 1 0 CRISPR-associated endoribonuclease Cas6 PPR_2 PF13041.6 ORF111014 - 0.16 12.2 0.0 2.7 8.2 0.0 2.4 2 1 1 3 3 3 0 PPR repeat family Plasmodium_Vir PF05795.11 ORF110863 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF110863 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF110863 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF110863 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF110863 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF110863 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF110863 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF110863 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF110863 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF110863 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF110863 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF110863 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF110863 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF110863 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF110863 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF110863 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF110863 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF110863 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF110863 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF110863 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF110863 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF110863 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF110863 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF110863 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF110863 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF110863 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF110863 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF110863 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF110863 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF110863 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF110863 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF110863 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF110863 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 DUF2465 PF10239.9 ORF110550 - 0.089 12.0 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2465) Serglycin PF04360.12 ORF107065 - 8.9 6.3 8.5 17 5.3 8.4 1.5 1 1 0 1 1 1 0 Serglycin HGTP_anticodon PF03129.20 ORF106841 - 0.0022 18.1 0.0 0.0046 17.1 0.0 1.6 2 1 0 2 2 2 1 Anticodon binding domain MyTH4 PF00784.17 ORF105869 - 0.055 14.0 0.2 3.1 8.4 0.0 2.2 2 0 0 2 2 2 0 MyTH4 domain adh_short_C2 PF13561.6 ORF101013 - 2.2e-41 142.0 0.0 3.5e-41 141.3 0.0 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF101013 - 5.1e-32 110.9 0.0 6.3e-32 110.6 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF101013 - 0.11 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 KR domain Myb_DNA-binding PF00249.31 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 5e-18 65.0 5.8 3.7e-16 59.0 2.0 2.3 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 1e-15 57.7 0.9 1.9e-15 56.9 0.9 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Rap1_C PF11626.8 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 0.00034 20.6 1.0 0.00096 19.2 0.1 1.9 1 1 1 2 2 2 1 TRF2-interacting telomeric protein/Rap1 - C terminal domain SLIDE PF09111.10 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 0.0077 16.2 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 SLIDE Exo70 PF03081.15 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 0.081 12.0 0.1 0.11 11.5 0.1 1.1 1 0 0 1 1 1 0 Exo70 exocyst complex subunit Vfa1 PF08432.10 NODE_36884_length_580_cov_3.847706_g29689_i0forward_frame_1 - 0.83 10.0 11.8 1.2 9.5 11.8 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 RRN3 PF05327.11 NODE_36884_length_580_cov_3.847706_g29689_i0forward_frame_1 - 2.8 6.4 9.6 3.5 6.0 9.6 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Ion_trans PF00520.31 NODE_36880_length_580_cov_56.500917_g29685_i0forward_frame_1 - 8.1e-30 103.8 9.2 1e-29 103.5 9.2 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 NODE_36880_length_580_cov_56.500917_g29685_i0forward_frame_1 - 7.6e-10 38.0 10.7 1.1e-09 37.5 10.7 1.1 1 0 0 1 1 1 1 Polycystin cation channel DASH_Dam1 PF08653.10 NODE_36880_length_580_cov_56.500917_g29685_i0forward_frame_1 - 0.019 14.7 0.4 0.45 10.4 0.0 2.6 2 0 0 2 2 2 0 DASH complex subunit Dam1 BPD_transp_1 PF00528.22 NODE_36880_length_580_cov_56.500917_g29685_i0forward_frame_1 - 0.033 13.9 4.8 0.046 13.5 0.3 2.1 2 0 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component DUF4506 PF14958.6 NODE_36851_length_580_cov_462.291743_g23750_i2reverse_frame_1 - 0.004 16.7 0.3 0.0084 15.6 0.3 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4506) CsrA PF02599.16 NODE_36817_length_581_cov_105.527473_g29628_i0reverse_frame_1 - 2.4 8.2 3.3 26 4.9 0.1 3.0 3 0 0 3 3 3 0 Global regulator protein family ABC_tran PF00005.27 NODE_36814_length_581_cov_162.677656_g29625_i0reverse_frame_1 - 2e-05 25.1 0.0 3.5e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter GvpH PF05455.11 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.001 19.2 15.9 35 4.4 0.1 7.8 1 1 8 9 9 9 0 GvpH A1_Propeptide PF07966.12 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.0011 18.8 0.0 5.1e+02 0.7 0.0 6.8 8 0 0 8 8 8 0 A1 Propeptide RTTN_N PF14726.6 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.0052 17.6 6.6 1.7 9.5 0.7 3.2 1 1 2 3 3 3 2 Rotatin, an armadillo repeat protein, centriole functioning DUF2785 PF10978.8 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.02 14.6 7.7 0.68 9.7 1.5 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2785) KH_4 PF13083.6 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.08 12.8 24.0 7.2 6.6 0.1 7.7 8 0 0 8 8 8 0 KH domain SbsC_C PF18058.1 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.12 12.6 7.5 22 5.3 0.2 3.7 1 1 3 4 4 4 0 SbsC C-terminal domain Methyltr_RsmB-F PF01189.17 NODE_36774_length_582_cov_83.700183_g29592_i0reverse_frame_1 - 5.5e-12 45.7 0.1 5.6e-10 39.2 0.1 2.9 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Ubie_methyltran PF01209.18 NODE_36774_length_582_cov_83.700183_g29592_i0reverse_frame_1 - 0.00012 21.5 0.0 0.00018 20.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 NODE_36774_length_582_cov_83.700183_g29592_i0reverse_frame_1 - 0.0059 16.4 0.1 0.0096 15.7 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_36774_length_582_cov_83.700183_g29592_i0reverse_frame_1 - 0.0071 17.0 0.0 0.011 16.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DYW_deaminase PF14432.6 NODE_36771_length_582_cov_90.215722_g29589_i0reverse_frame_1 - 6.7e-11 42.2 0.6 9.9e-11 41.6 0.6 1.2 1 0 0 1 1 1 1 DYW family of nucleic acid deaminases Cas_Csy4 PF09618.10 NODE_36770_length_582_cov_90.372943_g29588_i0forward_frame_1 - 5.3 7.2 7.5 1.8 8.7 2.7 2.0 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_Csy4) Ferlin_C PF16165.5 NODE_36762_length_582_cov_103.107861_g27112_i1forward_frame_1 - 0.29 11.1 1.9 0.47 10.4 1.9 1.3 1 0 0 1 1 1 0 Ferlin C-terminus HATPase_c PF02518.26 NODE_36749_length_582_cov_221.550274_g29569_i0forward_frame_1 - 0.066 13.7 0.0 0.1 13.1 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YABBY PF04690.13 NODE_36737_length_582_cov_559.636197_g29194_i1reverse_frame_1 - 0.057 14.0 0.5 0.08 13.5 0.5 1.2 1 0 0 1 1 1 0 YABBY protein DUF1604 PF07713.13 NODE_36737_length_582_cov_559.636197_g29194_i1reverse_frame_1 - 0.065 13.1 0.9 0.12 12.2 0.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) YlaH PF14036.6 NODE_36727_length_583_cov_2.680657_g29552_i0reverse_frame_3 - 0.16 12.4 0.2 0.16 12.4 0.2 1.9 2 0 0 2 2 2 0 YlaH-like protein MORN PF02493.20 NODE_36727_length_583_cov_2.680657_g29552_i0forward_frame_3 - 9.8e-06 25.2 1.9 0.011 15.6 0.1 2.5 2 0 0 2 2 2 2 MORN repeat MORN PF02493.20 NODE_36727_length_583_cov_2.680657_g29552_i0forward_frame_2 - 7.1e-24 82.2 67.3 1.7e-06 27.6 4.0 6.9 7 0 0 7 7 7 6 MORN repeat DUF1948 PF09185.10 NODE_36722_length_583_cov_2.779197_g29547_i0forward_frame_2 - 0.016 15.1 0.5 0.026 14.4 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1948) Phosphorylase PF00343.20 NODE_36721_length_583_cov_2.812044_g29546_i0forward_frame_2 - 1.1e-83 281.8 0.1 1.2e-83 281.6 0.1 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase FlaC_arch PF05377.11 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 0.00092 19.6 2.9 0.0048 17.2 0.2 2.7 2 0 0 2 2 2 1 Flagella accessory protein C (FlaC) bZIP_1 PF00170.21 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 0.1 12.7 0.9 0.1 12.7 0.9 2.9 2 1 1 3 3 3 0 bZIP transcription factor Snapin_Pallidin PF14712.6 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 0.15 12.5 4.9 0.76 10.2 0.3 2.7 2 1 0 2 2 2 0 Snapin/Pallidin DUF4140 PF13600.6 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 0.63 10.5 3.6 2.4 8.6 1.8 2.4 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) V_ATPase_I PF01496.19 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 1.1 7.1 9.2 1.2 7.0 9.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 2.6 8.1 5.3 3.4 7.7 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) CLZ PF16526.5 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 3.5 8.1 8.5 1.1 9.6 0.2 3.2 3 2 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF724 PF05266.14 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 7.2 6.4 16.7 0.23 11.2 4.2 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Spc24 PF08286.11 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 7.4 6.9 12.1 2.3 8.5 2.9 3.0 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 XhlA PF10779.9 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 7.5 6.8 14.2 0.16 12.2 1.5 2.9 3 0 0 3 3 3 0 Haemolysin XhlA ERGIC_N PF13850.6 NODE_36716_length_583_cov_59.233577_g29541_i0forward_frame_3 - 0.87 10.0 5.2 0.26 11.6 1.3 2.0 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Rrn6 PF10214.9 NODE_36712_length_583_cov_89.012774_g29537_i0forward_frame_3 - 2.6 6.4 16.0 3.1 6.2 16.0 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor ASFV_J13L PF05568.11 NODE_36712_length_583_cov_89.012774_g29537_i0forward_frame_2 - 3.6 7.3 7.6 4.9 6.9 7.6 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein NPV_P10 PF05531.12 NODE_36703_length_583_cov_178.186131_g29529_i0reverse_frame_3 - 0.081 13.4 1.3 0.23 11.9 1.1 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ACR_tran PF00873.19 NODE_36703_length_583_cov_178.186131_g29529_i0reverse_frame_3 - 0.5 7.9 4.1 0.62 7.6 4.1 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF1604 PF07713.13 NODE_36703_length_583_cov_178.186131_g29529_i0reverse_frame_3 - 0.51 10.2 2.6 1.3 8.9 2.6 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) Cid2 PF09774.9 NODE_36703_length_583_cov_178.186131_g29529_i0reverse_frame_3 - 0.7 10.3 7.1 0.26 11.7 4.2 1.7 1 1 1 2 2 2 0 Caffeine-induced death protein 2 Phage_holin_3_6 PF07332.11 NODE_36693_length_583_cov_781.868613_g29229_i1forward_frame_2 - 0.002 18.2 1.9 0.0029 17.6 1.9 1.2 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III TMEM171 PF15471.6 NODE_36693_length_583_cov_781.868613_g29229_i1forward_frame_2 - 0.3 10.0 2.6 0.19 10.7 0.4 1.7 1 1 0 1 1 1 0 Transmembrane protein family 171 DUF308 PF03729.13 NODE_36693_length_583_cov_781.868613_g29229_i1forward_frame_2 - 0.48 10.8 14.1 0.87 10.0 14.1 1.4 1 0 0 1 1 1 0 Short repeat of unknown function (DUF308) SdpI PF13630.6 NODE_36693_length_583_cov_781.868613_g29229_i1forward_frame_2 - 0.76 10.0 7.8 1.5 9.0 7.8 1.5 1 0 0 1 1 1 0 SdpI/YhfL protein family HlyIII PF03006.20 NODE_36687_length_584_cov_2.377049_g29517_i0reverse_frame_3 - 0.036 13.8 5.3 0.044 13.5 5.3 1.1 1 0 0 1 1 1 0 Haemolysin-III related # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks104.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks104.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks104.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks104.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YWFCY PF14293.6 NODE_36685_length_584_cov_2.664845_g29515_i0reverse_frame_2 - 0.047 14.0 4.3 0.047 14.0 4.3 1.9 2 0 0 2 2 2 0 YWFCY protein AA_kinase PF00696.28 NODE_36683_length_584_cov_2.941712_g29513_i0reverse_frame_2 - 0.00011 21.9 0.0 0.00014 21.5 0.0 1.2 1 0 0 1 1 1 1 Amino acid kinase family Pheromone PF08015.11 NODE_36683_length_584_cov_2.941712_g29513_i0forward_frame_3 - 0.08 14.0 5.7 4.1 8.5 0.5 2.7 2 1 1 3 3 3 0 Fungal mating-type pheromone DUF4064 PF13273.6 NODE_36681_length_584_cov_3.040073_g29511_i0reverse_frame_2 - 0.026 14.8 1.7 0.063 13.6 1.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) OAD_gamma PF04277.13 NODE_36681_length_584_cov_3.040073_g29511_i0reverse_frame_2 - 0.056 14.0 0.2 0.099 13.3 0.2 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain SecE PF00584.20 NODE_36681_length_584_cov_3.040073_g29511_i0reverse_frame_2 - 0.17 11.8 3.6 0.35 10.8 3.6 1.4 1 0 0 1 1 1 0 SecE/Sec61-gamma subunits of protein translocation complex ECH_1 PF00378.20 NODE_36679_length_584_cov_3.083789_g29509_i0reverse_frame_3 - 3.2e-22 79.0 0.0 4.3e-22 78.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 NODE_36679_length_584_cov_3.083789_g29509_i0reverse_frame_3 - 5.3e-15 55.7 0.0 6.6e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase FCH PF00611.23 NODE_36679_length_584_cov_3.083789_g29509_i0reverse_frame_3 - 0.22 11.8 0.0 0.35 11.2 0.0 1.3 1 0 0 1 1 1 0 Fes/CIP4, and EFC/F-BAR homology domain PH PF00169.29 NODE_36671_length_584_cov_49.451730_g29501_i0forward_frame_3 - 4.6e-09 36.7 0.0 1.2e-08 35.4 0.0 1.7 1 1 0 1 1 1 1 PH domain PH_8 PF15409.6 NODE_36671_length_584_cov_49.451730_g29501_i0forward_frame_3 - 0.044 14.1 0.0 0.26 11.6 0.0 2.2 2 0 0 2 2 2 0 Pleckstrin homology domain MT PF12777.7 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 3.3e-17 62.5 6.0 4e-17 62.3 6.0 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor BORCS7 PF16088.5 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.01 16.1 1.7 0.028 14.7 1.6 1.8 1 1 1 2 2 2 0 BLOC-1-related complex sub-unit 7 DUF2564 PF10819.8 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.011 16.2 2.8 0.03 14.7 2.8 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2564) Spc7 PF08317.11 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.14 11.0 13.7 0.21 10.4 13.7 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein TPR_2 PF07719.17 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.28 11.4 3.6 8.1 6.8 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat FliD_N PF02465.18 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.52 11.0 6.6 0.34 11.6 3.7 2.1 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus FlgM PF04316.13 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.76 10.2 0.1 0.76 10.2 0.1 2.7 3 0 0 3 3 3 0 Anti-sigma-28 factor, FlgM TSNAXIP1_N PF15739.5 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 1.2 9.5 11.2 0.37 11.2 6.9 2.1 2 0 0 2 2 2 0 Translin-associated factor X-interacting N-terminus DUF2229 PF09989.9 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 2.9 7.5 11.4 34 4.0 11.4 2.0 1 1 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) FAA_hydro_N_2 PF18288.1 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 4.1 7.9 6.0 2.8 8.4 2.0 2.6 2 1 1 3 3 3 0 Fumarylacetoacetase N-terminal domain 2 DUF4661 PF15576.6 NODE_36648_length_584_cov_178.502732_g29479_i0forward_frame_2 - 0.26 11.1 4.9 0.34 10.8 4.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) DUF2201_N PF13203.6 NODE_36648_length_584_cov_178.502732_g29479_i0forward_frame_2 - 1.3 8.5 7.8 1.8 8.1 7.8 1.2 1 0 0 1 1 1 0 Putative metallopeptidase domain CDC45 PF02724.14 NODE_36648_length_584_cov_178.502732_g29479_i0forward_frame_2 - 3.1 6.0 15.9 3.5 5.8 15.9 1.1 1 0 0 1 1 1 0 CDC45-like protein Peptidase_C37 PF05416.12 NODE_36648_length_584_cov_178.502732_g29479_i0forward_frame_2 - 4.1 5.8 11.9 4.9 5.5 11.9 1.1 1 0 0 1 1 1 0 Southampton virus-type processing peptidase Internalin_N PF12354.8 NODE_36637_length_585_cov_2.350909_g29470_i0reverse_frame_3 - 0.011 15.8 2.6 0.023 14.8 2.6 1.5 1 0 0 1 1 1 0 Bacterial adhesion/invasion protein N terminal HNH_3 PF13392.6 NODE_36637_length_585_cov_2.350909_g29470_i0reverse_frame_2 - 0.066 13.0 0.1 0.14 11.9 0.1 1.5 1 0 0 1 1 1 0 HNH endonuclease Cons_hypoth698 PF03601.14 NODE_36637_length_585_cov_2.350909_g29470_i0forward_frame_3 - 4.8e-63 212.9 12.9 5.4e-63 212.7 12.9 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 698 KdgT PF03812.13 NODE_36637_length_585_cov_2.350909_g29470_i0forward_frame_3 - 7e-06 25.6 9.7 8.4e-06 25.3 9.7 1.1 1 0 0 1 1 1 1 2-keto-3-deoxygluconate permease DUF2231 PF09990.9 NODE_36637_length_585_cov_2.350909_g29470_i0forward_frame_3 - 0.039 14.4 1.5 0.039 14.4 1.5 2.8 2 2 1 3 3 3 0 Predicted membrane protein (DUF2231) Asp-Al_Ex PF06826.12 NODE_36637_length_585_cov_2.350909_g29470_i0forward_frame_3 - 0.32 10.8 15.8 0.75 9.6 15.8 1.6 1 1 0 1 1 1 0 Predicted Permease Membrane Region MCM_bind PF09739.9 NODE_36631_length_585_cov_3.614545_g29464_i0reverse_frame_2 - 0.14 10.6 0.0 0.16 10.4 0.0 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor ScdA_N PF04405.14 NODE_36631_length_585_cov_3.614545_g29464_i0forward_frame_3 - 0.078 12.7 0.2 0.15 11.7 0.2 1.4 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) DUF2373 PF10180.9 NODE_36621_length_585_cov_79.345455_g29454_i0reverse_frame_2 - 0.014 15.2 0.2 0.038 13.8 0.2 1.7 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2373) IL2 PF00715.17 NODE_36621_length_585_cov_79.345455_g29454_i0reverse_frame_2 - 0.12 12.3 1.0 0.4 10.6 0.4 1.9 2 0 0 2 2 2 0 Interleukin 2 HTH_Tnp_Mu_1 PF02316.16 NODE_36620_length_585_cov_80.089091_g29453_i0reverse_frame_3 - 0.084 13.0 0.9 0.19 11.9 0.3 1.7 1 1 1 2 2 2 0 Mu DNA-binding domain Peptidase_S9 PF00326.21 NODE_36607_length_585_cov_177.034545_g29443_i0forward_frame_3 - 2.7e-26 92.4 0.0 3.2e-26 92.1 0.0 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 NODE_36607_length_585_cov_177.034545_g29443_i0forward_frame_3 - 3e-07 30.2 0.0 1.1e-06 28.4 0.0 1.7 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 NODE_36607_length_585_cov_177.034545_g29443_i0forward_frame_3 - 2.7e-06 26.8 0.0 0.055 12.7 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 NODE_36607_length_585_cov_177.034545_g29443_i0forward_frame_3 - 0.00013 21.7 0.1 0.035 13.7 0.1 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 NODE_36607_length_585_cov_177.034545_g29443_i0forward_frame_3 - 0.00013 21.9 0.0 0.00026 20.9 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold FSH1 PF03959.13 NODE_36607_length_585_cov_177.034545_g29443_i0forward_frame_3 - 0.00031 20.5 0.0 0.00044 20.0 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase (FSH1) BAAT_C PF08840.11 NODE_36607_length_585_cov_177.034545_g29443_i0forward_frame_3 - 0.0011 18.9 0.0 0.005 16.8 0.0 1.8 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_2 PF02230.16 NODE_36607_length_585_cov_177.034545_g29443_i0forward_frame_3 - 0.003 17.4 0.0 0.17 11.6 0.0 2.1 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase AXE1 PF05448.12 NODE_36607_length_585_cov_177.034545_g29443_i0forward_frame_3 - 0.057 12.1 0.0 0.12 11.1 0.0 1.7 1 1 0 1 1 1 0 Acetyl xylan esterase (AXE1) zf-MIZ PF02891.20 NODE_36606_length_585_cov_193.345455_g29442_i0forward_frame_3 - 0.12 12.2 0.2 0.12 12.2 0.2 2.0 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger Tht1 PF04163.12 NODE_36606_length_585_cov_193.345455_g29442_i0forward_frame_2 - 0.72 8.6 2.0 1 8.0 2.0 1.2 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein Cytochrome_CBB3 PF13442.6 NODE_36597_length_585_cov_286.336364_g29434_i0reverse_frame_3 - 0.0016 18.7 0.0 0.0023 18.2 0.0 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 NODE_36597_length_585_cov_286.336364_g29434_i0reverse_frame_3 - 0.045 13.4 0.4 0.1 12.3 0.2 1.6 1 1 1 2 2 2 0 Cytochrome c-550 domain HALZ PF02183.18 NODE_36585_length_585_cov_3327.345455_g29428_i0reverse_frame_3 - 0.11 12.7 1.1 0.11 12.7 1.1 2.2 1 1 1 2 2 2 0 Homeobox associated leucine zipper DivIC PF04977.15 NODE_36585_length_585_cov_3327.345455_g29428_i0reverse_frame_3 - 6.1 6.7 8.0 1.8 8.4 2.5 2.2 2 0 0 2 2 2 0 Septum formation initiator Peptidase_C97 PF05903.14 ORF99942 - 0.031 14.1 0.2 0.043 13.6 0.2 1.3 1 0 0 1 1 1 0 PPPDE putative peptidase domain Sigma_reg_N PF13800.6 ORF98976 - 0.046 14.0 0.7 0.089 13.1 0.2 1.8 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Sigma54_activat PF00158.26 ORF98643 - 3.3e-21 75.7 0.6 5.6e-21 75.0 0.6 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 ORF98643 - 1.1e-15 57.1 0.7 1.1e-15 57.1 0.7 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family Sigma54_activ_2 PF14532.6 ORF98643 - 1.7e-05 25.0 0.0 3.9e-05 23.8 0.0 1.7 2 0 0 2 2 2 1 Sigma-54 interaction domain HTH_30 PF13556.6 ORF98643 - 0.0019 18.0 1.9 0.0038 17.0 0.1 2.3 2 1 1 3 3 3 1 PucR C-terminal helix-turn-helix domain HTH_23 PF13384.6 ORF98643 - 0.0049 16.6 0.0 0.014 15.1 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 ORF98643 - 0.009 16.1 0.0 0.022 14.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_1 PF00126.27 ORF98643 - 0.018 15.0 0.3 0.11 12.5 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family CofC PF01983.16 ORF98643 - 0.025 13.8 0.0 0.25 10.5 0.0 2.0 2 0 0 2 2 2 0 Guanylyl transferase CofC like Phage_NinH PF06322.11 ORF98643 - 0.028 14.3 0.1 0.056 13.3 0.1 1.4 1 0 0 1 1 1 0 Phage NinH protein CSD PF00313.22 ORF97740 - 8.9e-15 54.3 0.1 1.5e-14 53.6 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain AAA_5 PF07728.14 ORF97355 - 0.06 13.3 0.7 0.094 12.7 0.7 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) FapA PF03961.13 ORF97355 - 0.55 8.8 16.0 0.73 8.4 16.0 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 ORF97355 - 4.5 6.3 12.6 5.3 6.0 12.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 EF-hand_7 PF13499.6 ORF96032 - 1.6e-11 44.5 0.1 4e-11 43.2 0.1 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF96032 - 3e-11 42.0 0.1 7e-05 22.1 0.0 3.2 3 1 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF96032 - 3.6e-09 35.7 0.0 0.0031 16.9 0.0 2.9 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF96032 - 5.7e-07 29.0 0.0 0.081 12.9 0.0 3.1 2 1 1 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF96032 - 0.00088 19.1 1.1 0.051 13.4 0.1 2.7 1 1 1 2 2 2 1 EF-hand domain pair ABC2_membrane_3 PF12698.7 ORF96032 - 0.071 12.2 0.5 0.091 11.9 0.5 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein Dockerin_1 PF00404.18 ORF96032 - 0.089 13.0 0.0 0.24 11.6 0.0 1.8 1 0 0 1 1 1 0 Dockerin type I domain Cmc1 PF08583.10 ORF93967 - 0.013 15.5 3.3 0.013 15.5 3.3 1.6 2 0 0 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like CX9C PF16860.5 ORF93967 - 0.018 15.0 0.7 0.018 15.0 0.7 2.1 1 1 1 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, CHCH PF06747.13 ORF93967 - 0.23 11.7 3.4 7.9 6.7 0.4 2.5 3 0 0 3 3 3 0 CHCH domain rOmpB PF12334.8 ORF92397 - 0.019 14.5 0.3 5.8 6.3 0.0 2.6 3 0 0 3 3 3 0 Rickettsia outer membrane protein B 2TM PF13239.6 ORF90355 - 0.023 15.0 5.2 0.023 15.0 5.2 3.1 1 1 2 3 3 3 0 2TM domain PCP PF02429.15 ORF8894 - 5.5e-38 130.5 9.1 4.4e-36 124.4 2.3 2.1 2 0 0 2 2 2 2 Peridinin-chlorophyll A binding protein Ribonuc_L-PSP PF01042.21 ORF8894 - 0.02 14.9 1.0 0.11 12.5 0.1 2.1 2 0 0 2 2 2 0 Endoribonuclease L-PSP TAL_FSA PF00923.19 ORF8894 - 0.064 12.6 0.5 0.092 12.1 0.5 1.3 1 1 0 1 1 1 0 Transaldolase/Fructose-6-phosphate aldolase ADK PF00406.22 ORF87243 - 3.9e-45 153.6 0.0 4.6e-45 153.4 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF87243 - 5.3e-37 127.3 0.1 6.8e-37 126.9 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF87243 - 1.2e-11 45.2 0.1 1.8e-11 44.7 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF87243 - 1.5e-08 34.9 0.0 2.6e-08 34.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF87243 - 7.8e-06 25.7 0.2 0.0031 17.2 0.1 2.1 2 0 0 2 2 2 2 Thymidylate kinase Zeta_toxin PF06414.12 ORF87243 - 0.00011 21.5 0.0 0.00027 20.3 0.0 1.5 1 1 0 1 1 1 1 Zeta toxin SRP54 PF00448.22 ORF87243 - 0.024 14.3 0.0 0.078 12.6 0.0 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Ploopntkinase3 PF18751.1 ORF87243 - 0.03 14.2 0.0 0.05 13.5 0.0 1.5 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_19 PF13245.6 ORF87243 - 0.04 14.2 2.1 0.13 12.6 0.3 2.1 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 ORF87243 - 0.13 12.0 0.9 0.56 9.9 0.2 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein ATPase PF06745.13 ORF87243 - 0.18 11.2 1.6 0.67 9.3 0.2 2.3 3 0 0 3 3 3 0 KaiC CSD PF00313.22 ORF87173 - 8.9e-15 54.3 0.1 1.5e-14 53.6 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain Clathrin PF00637.20 ORF85967 - 1.8e-39 134.8 0.9 1.5e-21 76.8 0.2 2.0 2 0 0 2 2 2 2 Region in Clathrin and VPS TPR_14 PF13428.6 ORF85967 - 0.051 14.4 0.1 3.5 8.7 0.0 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat Pkinase PF00069.25 ORF83268 - 1.4e-15 57.3 0.0 2e-15 56.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83268 - 1.9e-05 24.1 0.0 2.9e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Sec20 PF03908.13 ORF83056 - 0.076 12.9 0.6 0.076 12.9 0.6 2.1 2 0 0 2 2 2 0 Sec20 3HCDH_N PF02737.18 ORF8288 - 0.062 13.2 0.8 0.093 12.6 0.6 1.4 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lambda_Kil PF06301.11 ORF8288 - 0.12 12.0 0.1 8.2 6.1 0.0 2.4 2 0 0 2 2 2 0 Bacteriophage lambda Kil protein CobT PF06213.12 ORF8288 - 3.2 7.0 16.8 1.3 8.4 14.5 1.5 1 1 0 1 1 1 0 Cobalamin biosynthesis protein CobT MRC1 PF09444.10 ORF82087 - 0.042 14.4 0.1 0.058 13.9 0.1 1.1 1 0 0 1 1 1 0 MRC1-like domain HMG_box PF00505.19 ORF8177 - 4.6e-18 65.4 17.9 6.2e-15 55.4 5.1 3.8 3 1 0 3 3 3 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF8177 - 2.4e-17 63.3 16.7 2.6e-15 56.7 4.1 3.2 3 1 1 4 4 4 2 HMG-box domain HMG_box_5 PF14887.6 ORF8177 - 3.2e-05 23.8 3.5 3.2e-05 23.8 3.5 3.5 1 1 3 4 4 4 2 HMG (high mobility group) box 5 GAGA_bind PF06217.12 ORF8177 - 0.52 10.5 19.8 0.57 10.4 19.8 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family YlqD PF11068.8 ORF8177 - 0.95 9.8 17.2 2.3 8.6 11.6 2.2 1 1 1 2 2 2 0 YlqD protein CDC45 PF02724.14 ORF8177 - 8.2 4.6 16.5 8.4 4.5 16.5 1.2 1 0 0 1 1 1 0 CDC45-like protein XPG_N PF00752.17 ORF80635 - 1e-30 106.2 0.5 2.5e-30 104.9 0.0 1.8 2 1 0 2 2 2 1 XPG N-terminal domain CPBP PF02517.16 ORF78616 - 1e-13 51.5 1.0 1e-13 51.5 1.0 1.8 1 1 1 2 2 2 1 CPBP intramembrane metalloprotease FKBP_C PF00254.28 ORF76586 - 1.9e-14 53.7 0.0 3.2e-14 53.0 0.0 1.4 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Tubulin PF00091.25 ORF74919 - 5.3e-47 160.6 0.0 6.1e-47 160.4 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 ORF74919 - 0.0098 15.6 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Tubulin domain Tubulin_2 PF13809.6 ORF74919 - 0.044 13.0 0.0 0.054 12.7 0.0 1.1 1 0 0 1 1 1 0 Tubulin like ThiF PF00899.21 ORF74747 - 1.5e-49 168.5 0.0 1.8e-49 168.3 0.0 1.0 1 0 0 1 1 1 1 ThiF family Shikimate_DH PF01488.20 ORF74747 - 0.00021 21.3 0.0 0.00041 20.4 0.0 1.5 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 ORF74747 - 0.02 15.3 0.0 0.033 14.6 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 ORF74747 - 0.025 14.8 0.1 0.043 14.1 0.1 1.5 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 ORF74747 - 0.032 14.5 0.0 0.053 13.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 ORF74747 - 0.035 13.7 0.1 0.048 13.2 0.1 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DAO PF01266.24 ORF74747 - 0.054 13.1 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 ORF74747 - 0.069 13.7 0.0 0.15 12.6 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase PglD_N PF17836.1 ORF74747 - 0.089 13.4 0.6 0.24 12.1 0.3 1.9 1 1 1 2 2 2 0 PglD N-terminal domain ApbA PF02558.16 ORF74747 - 0.19 11.4 0.0 0.34 10.5 0.0 1.5 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Ank_4 PF13637.6 ORF73181 - 7.8e-17 61.4 1.4 3.6e-08 33.8 0.1 3.3 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF73181 - 1.5e-16 60.2 0.3 5.6e-11 42.5 0.1 3.2 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF73181 - 6.3e-14 52.3 0.0 1.8e-13 50.9 0.0 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF73181 - 4.1e-12 46.0 0.3 1.2e-05 25.5 0.0 2.6 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF73181 - 3.5e-10 39.2 0.3 2.7e-05 24.2 0.0 2.8 3 0 0 3 3 3 2 Ankyrin repeat Reg_prop PF07494.11 ORF72099 - 0.96 9.9 0.1 0.96 9.9 0.1 3.2 4 1 0 4 4 4 0 Two component regulator propeller XPG_N PF00752.17 ORF70896 - 1e-30 106.2 0.5 2.5e-30 104.9 0.0 1.8 2 1 0 2 2 2 1 XPG N-terminal domain Vps52 PF04129.12 ORF69495 - 8.6e-05 21.5 0.5 0.00017 20.5 0.0 1.6 2 0 0 2 2 2 1 Vps52 / Sac2 family GxGYxYP_C PF14323.6 ORF69495 - 0.012 15.5 0.1 0.013 15.4 0.1 1.2 1 0 0 1 1 1 0 GxGYxYP putative glycoside hydrolase C-terminal domain PgaPase_1 PF06162.12 ORF69495 - 0.093 12.5 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 Putative pyroglutamyl peptidase PgaPase_1 DUF5500 PF17604.2 ORF69488 - 0.064 13.4 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5500) MFS_1 PF07690.16 ORF69029 - 1.7e-16 60.1 11.5 2e-16 59.9 11.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_3 PF05977.13 ORF69029 - 0.0005 18.6 0.3 0.00064 18.2 0.3 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector DUF3139 PF11337.8 ORF67491 - 3.7 8.3 7.5 0.68 10.6 2.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) CSD PF00313.22 ORF66088 - 8.9e-15 54.3 0.1 1.5e-14 53.6 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain DUF4199 PF13858.6 ORF63913 - 0.015 15.7 0.3 0.024 15.1 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) ERGIC_N PF13850.6 ORF63913 - 0.1 13.0 0.1 0.15 12.4 0.1 1.4 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Aldedh PF00171.22 ORF60721 - 3.4e-06 25.9 0.0 5.6e-06 25.1 0.0 1.4 1 1 0 1 1 1 1 Aldehyde dehydrogenase family DUF829 PF05705.14 ORF60391 - 3.4e-13 50.0 0.1 3.9e-13 49.9 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF829) DFP PF04127.15 ORF60391 - 0.03 14.2 0.6 0.15 11.9 0.1 2.0 1 1 1 2 2 2 0 DNA / pantothenate metabolism flavoprotein Dppa2_A PF14049.6 ORF60391 - 0.056 13.6 1.2 0.11 12.7 1.2 1.5 1 0 0 1 1 1 0 Dppa2/4 conserved region in higher vertebrates Hydrolase_4 PF12146.8 ORF60391 - 0.062 12.5 0.0 0.077 12.2 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Fimbrial PF00419.20 ORF57565 - 3.2e-23 82.7 0.0 4.1e-23 82.4 0.0 1.1 1 0 0 1 1 1 1 Fimbrial protein Pro_isomerase PF00160.21 ORF57062 - 1.6e-45 155.2 0.0 1.8e-45 155.0 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TLD PF07534.16 ORF56507 - 2.5e-14 53.7 0.0 2.9e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 TLD Activator-TraM PF11657.8 ORF56372 - 0.083 12.7 1.5 0.13 12.1 1.5 1.5 1 1 0 1 1 1 0 Transcriptional activator TraM TFIIA PF03153.13 ORF56321 - 1.4e-09 38.4 0.1 1.6e-09 38.3 0.1 1.2 1 0 0 1 1 1 1 Transcription factor IIA, alpha/beta subunit DUF445 PF04286.12 ORF56321 - 0.017 14.9 0.2 0.02 14.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) rve_3 PF13683.6 ORF56321 - 0.028 14.2 0.1 13 5.6 0.0 2.8 2 1 1 3 3 3 0 Integrase core domain AceK PF06315.11 ORF56321 - 0.056 11.9 0.4 0.065 11.7 0.4 1.1 1 0 0 1 1 1 0 Isocitrate dehydrogenase kinase/phosphatase (AceK) TMEM43 PF07787.12 ORF56321 - 0.062 12.7 0.5 0.078 12.4 0.5 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 DUF5442 PF17514.2 ORF56321 - 0.12 12.6 1.6 0.22 11.8 0.2 2.0 3 0 0 3 3 3 0 Family of unknown function (DUF5442) Globin PF00042.22 ORF51171 - 2.6e-16 60.2 0.1 3.8e-16 59.6 0.1 1.3 1 0 0 1 1 1 1 Globin Ntox35 PF15534.6 ORF51171 - 0.076 13.5 0.1 0.37 11.3 0.0 2.0 1 1 1 2 2 2 0 Bacterial toxin 35 YfdX PF10938.8 ORF51171 - 0.078 12.9 0.2 0.11 12.4 0.2 1.2 1 0 0 1 1 1 0 YfdX protein LCAT PF02450.15 ORF49253 - 0.0002 20.7 0.1 0.00027 20.2 0.1 1.2 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase Phlebovirus_NSM PF07246.11 ORF49134 - 0.023 14.1 1.9 0.03 13.7 1.9 1.1 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M Atg14 PF10186.9 ORF49134 - 0.066 12.3 4.6 0.078 12.1 4.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Pox_G5 PF04599.12 ORF49134 - 0.28 10.1 4.5 0.36 9.8 4.5 1.1 1 0 0 1 1 1 0 Poxvirus G5 protein SIT PF15330.6 ORF4866 - 1.6 9.2 4.7 2.8 8.4 4.5 1.6 1 1 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT Globin PF00042.22 ORF4829 - 2.6e-16 60.2 0.1 3.8e-16 59.6 0.1 1.3 1 0 0 1 1 1 1 Globin Ntox35 PF15534.6 ORF4829 - 0.076 13.5 0.1 0.37 11.3 0.0 2.0 1 1 1 2 2 2 0 Bacterial toxin 35 YfdX PF10938.8 ORF4829 - 0.078 12.9 0.2 0.11 12.4 0.2 1.2 1 0 0 1 1 1 0 YfdX protein Amino_oxidase PF01593.24 ORF46712 - 6.7e-10 38.8 0.0 8e-10 38.6 0.0 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Pyr_redox PF00070.27 ORF46712 - 0.08 13.5 0.0 0.16 12.6 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase BNR_2 PF13088.6 ORF42546 - 0.024 13.9 0.6 0.032 13.5 0.6 1.2 1 0 0 1 1 1 0 BNR repeat-like domain Peptidase_M35 PF02102.15 ORF41063 - 0.084 11.7 0.5 0.14 11.0 0.5 1.3 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family CPBP PF02517.16 ORF40022 - 9.8e-14 51.5 0.8 9.8e-14 51.5 0.8 1.9 1 1 1 2 2 2 1 CPBP intramembrane metalloprotease PAP2 PF01569.21 ORF3961 - 1.2e-10 41.3 6.1 2e-10 40.6 6.1 1.5 1 1 0 1 1 1 1 PAP2 superfamily LRR_6 PF13516.6 ORF34444 - 0.0046 16.9 1.9 0.8 9.9 0.1 2.9 3 0 0 3 3 3 2 Leucine Rich repeat Cuticle_3 PF11018.8 ORF34395 - 0.012 15.9 19.7 0.015 15.5 19.7 1.1 1 0 0 1 1 1 0 Pupal cuticle protein C1 Baculo_11_kDa PF06143.11 ORF32547 - 0.53 9.9 3.6 1.1 8.9 3.6 1.5 1 0 0 1 1 1 0 Baculovirus 11 kDa family Metalloenzyme PF01676.18 ORF31044 - 1.3e-61 208.1 0.1 1.6e-61 207.9 0.1 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Sulfatase PF00884.23 ORF31044 - 0.0019 17.7 0.0 0.0026 17.2 0.0 1.3 1 1 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF31044 - 0.0026 17.4 0.0 0.0026 17.4 0.0 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PGM_PMM_II PF02879.16 ORF31044 - 0.0072 16.9 0.0 0.48 11.1 0.0 2.6 3 0 0 3 3 3 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PglZ PF08665.12 ORF31044 - 0.011 15.8 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 0 PglZ domain Phage_TTP_12 PF16461.5 ORF31044 - 0.011 15.4 0.1 0.039 13.6 0.0 1.9 2 1 0 2 2 2 0 Lambda phage tail tube protein, TTP UPF0020 PF01170.18 ORF31044 - 0.035 13.8 0.0 0.053 13.2 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 PIG-L PF02585.17 ORF31044 - 0.081 13.6 0.0 0.34 11.6 0.0 1.9 2 0 0 2 2 2 0 GlcNAc-PI de-N-acetylase SBP_bac_8 PF13416.6 ORF31044 - 0.16 11.8 0.0 0.26 11.0 0.0 1.3 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein WBS_methylT PF12589.8 ORF29515 - 2.6e-12 47.3 7.2 3.9e-12 46.8 7.2 1.2 1 0 0 1 1 1 1 Methyltransferase involved in Williams-Beuren syndrome rOmpB PF12334.8 ORF29019 - 0.019 14.5 0.3 5.8 6.3 0.0 2.6 3 0 0 3 3 3 0 Rickettsia outer membrane protein B WW PF00397.26 ORF28655 - 2.5e-11 43.5 4.2 2.5e-11 43.5 4.2 2.1 2 0 0 2 2 2 1 WW domain EF-hand_7 PF13499.6 ORF276 - 5.4e-14 52.4 0.1 1.7e-10 41.2 0.1 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF276 - 5.3e-11 41.3 0.1 0.0001 21.6 0.0 3.1 3 1 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF276 - 1e-08 34.3 0.0 0.0044 16.5 0.0 2.7 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF276 - 1.3e-06 27.8 0.0 0.13 12.3 0.0 3.0 2 1 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF276 - 7.5e-05 22.5 0.3 0.037 13.9 0.1 2.7 2 1 0 2 2 2 2 EF-hand domain pair Proteasome PF00227.26 ORF27249 - 5.2e-36 123.9 0.0 6.3e-36 123.6 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit Ras PF00071.22 ORF25527 - 1.8e-57 193.5 0.2 2.1e-57 193.2 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF25527 - 2.3e-33 115.0 0.0 3.3e-33 114.4 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF25527 - 7.7e-17 61.3 0.0 9.3e-17 61.0 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF25527 - 1.2e-07 31.8 0.0 0.0058 16.5 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 ORF25527 - 3.5e-07 29.8 0.1 4e-07 29.6 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF25527 - 5e-06 26.6 0.0 7.6e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF25527 - 0.0025 17.3 0.0 0.0064 15.9 0.0 1.8 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_24 PF13479.6 ORF25527 - 0.0061 16.3 0.1 0.16 11.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 ORF25527 - 0.019 15.3 0.0 0.039 14.2 0.0 1.8 1 1 0 1 1 1 0 AAA domain FeoB_N PF02421.18 ORF25527 - 0.028 14.0 0.0 0.22 11.1 0.0 1.9 2 0 0 2 2 2 0 Ferrous iron transport protein B PduV-EutP PF10662.9 ORF25527 - 0.028 14.2 0.1 0.054 13.2 0.1 1.8 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.6 ORF25527 - 0.072 13.5 0.0 0.16 12.4 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 ORF25527 - 0.11 13.0 0.1 3 8.4 0.0 2.2 2 1 0 2 2 2 0 ABC transporter DUF2000 PF09391.10 ORF25527 - 0.12 12.2 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2000) AAA_5 PF07728.14 ORF25527 - 0.15 12.0 0.0 0.38 10.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DNA_pol_E_B PF04042.16 ORF25527 - 0.21 10.9 0.0 0.3 10.4 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B Proteasome PF00227.26 ORF23814 - 5.2e-36 123.9 0.0 6.3e-36 123.6 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit Baculo_11_kDa PF06143.11 ORF20194 - 0.53 9.9 3.6 1.1 8.9 3.6 1.5 1 0 0 1 1 1 0 Baculovirus 11 kDa family SelR PF01641.18 ORF19293 - 1.8e-51 173.3 0.5 2.6e-51 172.8 0.5 1.2 1 0 0 1 1 1 1 SelR domain Proteasome PF00227.26 ORF19099 - 4.3e-41 140.5 0.1 5.1e-41 140.3 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit EF-hand_1 PF00036.32 ORF1771 - 1.8e-15 55.2 13.1 0.00016 21.0 0.4 5.3 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF1771 - 1.9e-14 52.3 13.1 0.00024 20.8 0.3 5.0 4 1 1 5 5 5 4 EF-hand domain EF-hand_7 PF13499.6 ORF1771 - 2.3e-12 47.2 9.4 1.3e-05 25.5 0.5 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF1771 - 2.4e-10 40.1 9.1 2.1e-07 30.7 0.5 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF1771 - 3.1e-09 35.9 14.8 0.0044 16.4 0.2 5.2 5 1 0 5 5 5 3 EF hand Caleosin PF05042.13 ORF1771 - 0.12 12.4 3.7 3.6 7.5 0.3 2.8 1 1 0 2 2 2 0 Caleosin related protein Rotamase PF00639.21 ORF16969 - 0.0015 19.5 0.0 0.0035 18.3 0.0 1.7 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF16969 - 0.03 15.2 0.0 0.046 14.6 0.0 1.4 1 1 0 1 1 1 0 PPIC-type PPIASE domain DUF5349 PF17298.2 ORF157 - 1.3 8.7 6.9 0.26 11.0 0.2 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5349) Ion_trans_2 PF07885.16 ORF14226 - 1.4e-07 31.3 15.4 2.8e-07 30.4 15.4 1.6 1 1 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF14226 - 3.9e-05 23.0 10.6 5.2e-05 22.6 10.6 1.1 1 0 0 1 1 1 1 Ion transport protein DUF4834 PF16118.5 ORF14226 - 0.77 10.8 4.7 6.6 7.8 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) IRK PF01007.20 ORF14226 - 0.92 9.3 7.1 1.8 8.4 7.1 1.5 1 1 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain Chordopox_A13L PF05961.11 ORF14226 - 5.1 7.4 13.5 0.094 13.0 1.9 2.7 3 0 0 3 3 3 0 Chordopoxvirus A13L protein DGF-1_5 PF11038.8 ORF1297 - 0.082 12.2 0.2 0.096 12.0 0.2 1.2 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 PA PF02225.22 ORF12954 - 2.9e-08 33.6 0.0 4e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 PA domain DUF5500 PF17604.2 ORF111747 - 0.064 13.4 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5500) NFACT-R_1 PF05670.13 ORF111280 - 3e-08 34.3 0.0 5.6e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 ORF111280 - 2.3e-06 27.8 0.0 4.4e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 NFACT protein RNA binding domain U3_snoRNA_assoc PF08297.11 ORF111280 - 0.035 14.8 4.2 2.8 8.7 4.3 2.3 2 0 0 2 2 2 0 U3 snoRNA associated Ank_2 PF12796.7 ORF110914 - 1.8e-27 95.7 7.0 3.6e-12 46.7 0.3 3.2 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF110914 - 3.8e-20 72.0 3.7 6.2e-11 42.6 0.1 3.6 4 0 0 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF110914 - 4.1e-20 71.3 1.7 5.6e-05 23.4 0.1 4.3 4 0 0 4 4 4 4 Ankyrin repeat Ank_5 PF13857.6 ORF110914 - 2.8e-18 65.7 2.8 0.00022 21.4 0.1 4.4 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF110914 - 1.1e-13 50.0 0.7 0.0062 16.9 0.1 4.5 4 0 0 4 4 4 4 Ankyrin repeat Catalase-rel PF06628.12 ORF110914 - 0.056 13.7 0.1 0.12 12.6 0.1 1.5 1 0 0 1 1 1 0 Catalase-related immune-responsive Ntox10 PF15520.6 ORF110914 - 0.066 13.1 0.1 0.087 12.7 0.1 1.2 1 0 0 1 1 1 0 Novel toxin 10 DUF1168 PF06658.12 ORF110502 - 1.3 8.8 20.2 0.18 11.6 4.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1168) EF-hand_1 PF00036.32 ORF109379 - 2.3e-10 39.3 0.5 5.4e-05 22.4 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF109379 - 3.9e-09 35.6 0.1 5.9e-05 22.4 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF109379 - 4.3e-09 36.7 0.0 7.9e-09 35.9 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF109379 - 7.1e-08 31.8 0.5 0.00031 20.4 0.0 2.7 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF109379 - 0.00045 20.0 0.3 0.079 12.8 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair DUF4860 PF16152.5 ORF109379 - 0.0029 17.4 0.0 0.0071 16.2 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4860) Beta-lactamase2 PF13354.6 ORF109379 - 0.052 13.2 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase enzyme family Globin PF00042.22 ORF109274 - 2.6e-16 60.2 0.1 3.8e-16 59.6 0.1 1.3 1 0 0 1 1 1 1 Globin Ntox35 PF15534.6 ORF109274 - 0.076 13.5 0.1 0.37 11.3 0.0 2.0 1 1 1 2 2 2 0 Bacterial toxin 35 YfdX PF10938.8 ORF109274 - 0.078 12.9 0.2 0.11 12.4 0.2 1.2 1 0 0 1 1 1 0 YfdX protein Methyltransf_11 PF08241.12 ORF108949 - 3.5e-10 40.4 0.0 5.2e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF108949 - 1.3e-09 38.2 0.0 1.5e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF108949 - 6.7e-08 33.1 0.0 1.1e-07 32.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF108949 - 1.1e-07 32.4 0.0 1.7e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF108949 - 2e-07 31.0 0.0 2.5e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF108949 - 0.0017 17.8 0.0 0.0019 17.6 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Peripla_BP_3 PF13377.6 ORF10870 - 7.1e-12 46.0 0.0 8.3e-12 45.7 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF10870 - 0.00047 19.7 0.0 0.001 18.5 0.0 1.7 1 1 1 2 2 2 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF10870 - 0.00054 19.6 0.0 0.00099 18.8 0.0 1.3 1 1 0 1 1 1 1 Periplasmic binding protein domain Receptor_2B4 PF11465.8 ORF10817 - 0.1 12.8 0.5 0.2 11.9 0.5 1.4 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 DUF1825 PF08855.10 ORF106000 - 6e-07 29.3 0.3 9.4e-07 28.7 0.3 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF1825) 2OG-FeII_Oxy PF03171.20 ORF105604 - 0.00017 22.0 0.0 0.00023 21.6 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Sec63 PF02889.16 ORF101789 - 3.4e-19 69.0 0.1 3.8e-19 68.9 0.1 1.0 1 0 0 1 1 1 1 Sec63 Brl domain ASH PF15780.5 ORF101789 - 0.067 13.4 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin UPF0149 PF03695.13 ORF100773 - 8.6e-41 140.1 1.1 9.7e-41 139.9 1.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0149) LAGLIDADG_3 PF14528.6 ORF100535 - 0.0068 16.7 0.5 0.017 15.4 0.5 1.7 1 1 0 1 1 1 1 LAGLIDADG-like domain ABC_tran PF00005.27 NODE_37033_length_577_cov_2.802583_g29825_i0forward_frame_1 - 1.4e-12 48.3 0.0 1.9e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter TOC159_MAD PF11886.8 NODE_37013_length_577_cov_114.485240_g13051_i1reverse_frame_1 - 0.026 13.4 0.7 0.04 12.8 0.7 1.3 1 0 0 1 1 1 0 Translocase of chloroplast 159/132, membrane anchor domain PUB PF09409.10 NODE_37006_length_577_cov_168.643911_g29801_i0reverse_frame_1 - 1.1e-08 34.9 0.0 1.1e-06 28.5 0.0 2.1 2 0 0 2 2 2 2 PUB domain FAA_hydro_N_2 PF18288.1 NODE_37006_length_577_cov_168.643911_g29801_i0reverse_frame_1 - 0.082 13.3 1.0 27 5.3 0.1 3.0 3 0 0 3 3 3 0 Fumarylacetoacetase N-terminal domain 2 SIT PF15330.6 NODE_36987_length_577_cov_1389.568266_g29784_i0forward_frame_1 - 0.032 14.7 0.3 0.032 14.7 0.3 1.5 1 1 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT DUF4834 PF16118.5 NODE_36987_length_577_cov_1389.568266_g29784_i0forward_frame_1 - 0.44 11.5 7.0 13 6.8 6.3 2.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DUF5626 PF18540.1 NODE_36981_length_578_cov_3.156538_g29779_i0forward_frame_1 - 0.13 12.8 4.1 0.78 10.3 4.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF5626) Spt5_N PF11942.8 NODE_36977_length_578_cov_5.384899_g29776_i0forward_frame_1 - 3.2 8.8 5.2 7.2 7.7 5.2 1.5 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal Hema_HEFG PF02710.14 NODE_36969_length_578_cov_93.795580_g29770_i0reverse_frame_1 - 0.17 12.1 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein TAF1_subA PF14929.6 NODE_36967_length_578_cov_96.620626_g29768_i0reverse_frame_1 - 0.0041 16.6 1.0 0.006 16.1 0.5 1.4 1 1 0 1 1 1 1 TAF RNA Polymerase I subunit A Borrelia_rep PF03183.13 NODE_36967_length_578_cov_96.620626_g29768_i0forward_frame_1 - 0.14 12.2 0.3 0.14 12.2 0.3 2.0 2 0 0 2 2 2 0 Borrelia repeat protein S1 PF00575.23 NODE_36952_length_578_cov_656.202578_g29753_i0reverse_frame_1 - 1.4e-09 38.2 0.5 0.00072 19.9 0.0 2.3 2 0 0 2 2 2 2 S1 RNA binding domain S1_2 PF13509.6 NODE_36952_length_578_cov_656.202578_g29753_i0reverse_frame_1 - 0.0078 16.3 0.1 0.27 11.3 0.0 2.9 3 0 0 3 3 3 1 S1 domain zf-rbx1 PF12678.7 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 2.8e-17 62.8 3.9 4.5e-17 62.1 3.9 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 1.5e-09 37.8 0.9 2.3e-09 37.2 0.9 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_2 PF13639.6 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 2.5e-07 30.9 2.4 4.6e-07 30.1 2.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 6.8e-05 22.6 2.6 0.00013 21.8 2.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 0.00017 21.4 1.0 0.00038 20.2 1.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 0.017 14.9 3.9 0.032 14.0 3.9 1.5 1 0 0 1 1 1 0 RING-like zinc finger FANCL_C PF11793.8 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 0.038 14.2 0.9 0.079 13.1 0.9 1.5 1 0 0 1 1 1 0 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 0.04 13.5 3.8 0.082 12.5 3.8 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 0.053 13.6 1.1 0.1 12.6 1.1 1.4 1 0 0 1 1 1 0 RING-type zinc-finger DUF1776 PF08643.10 NODE_36950_length_578_cov_2246.346225_g29751_i0forward_frame_1 - 0.13 11.6 0.7 0.15 11.4 0.7 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Lipoprotein_17 PF04200.12 NODE_36939_length_579_cov_42.944853_g29741_i0reverse_frame_1 - 0.077 13.4 7.7 0.19 12.1 7.7 1.6 1 0 0 1 1 1 0 Lipoprotein associated domain Tipalpha PF16753.5 NODE_36932_length_579_cov_92.277574_g29734_i0reverse_frame_1 - 0.027 14.3 0.1 1.2 8.9 0.1 2.2 1 1 1 2 2 2 0 TNF-alpha-Inducing protein of Helicobacter CPSF100_C PF13299.6 NODE_36931_length_579_cov_98.816176_g29733_i0forward_frame_1 - 0.12 12.6 2.8 0.17 12.1 2.8 1.2 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal DUF2397 PF09660.10 NODE_36920_length_579_cov_163.323529_g29722_i0forward_frame_1 - 0.00035 19.6 0.3 0.00048 19.2 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2397) WXG100 PF06013.12 NODE_36920_length_579_cov_163.323529_g29722_i0forward_frame_1 - 0.0066 16.6 0.9 0.022 15.0 0.3 2.0 2 0 0 2 2 2 1 Proteins of 100 residues with WXG SesA PF17107.5 NODE_36920_length_579_cov_163.323529_g29722_i0forward_frame_1 - 0.018 15.2 4.0 0.31 11.2 0.6 2.2 2 0 0 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases DUF948 PF06103.11 NODE_36920_length_579_cov_163.323529_g29722_i0forward_frame_1 - 0.26 11.6 5.2 0.22 11.8 0.5 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Fzo_mitofusin PF04799.13 NODE_36920_length_579_cov_163.323529_g29722_i0forward_frame_1 - 0.75 9.3 7.0 0.81 9.2 3.0 2.3 2 1 0 2 2 2 0 fzo-like conserved region DUF2203 PF09969.9 NODE_36920_length_579_cov_163.323529_g29722_i0forward_frame_1 - 0.79 10.5 3.5 2.3 9.0 0.4 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Allexi_40kDa PF05549.11 NODE_36920_length_579_cov_163.323529_g29722_i0forward_frame_1 - 3 7.3 11.4 0.15 11.6 2.7 2.0 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF3290 PF11694.8 NODE_36905_length_579_cov_447.681985_g29708_i0reverse_frame_1 - 0.92 9.5 5.5 4.5 7.2 5.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3290) Fib_alpha PF08702.10 NODE_36894_length_580_cov_2.282569_g29699_i0reverse_frame_3 - 0.0056 16.9 0.2 0.0079 16.4 0.2 1.2 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family DUF2031 PF09592.10 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.001 18.6 12.9 0.001 18.6 12.9 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF2031) GAS PF13851.6 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.0014 18.0 3.0 0.0014 18.0 3.0 2.7 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding ATG16 PF08614.11 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.025 14.8 8.1 0.25 11.5 0.7 2.3 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) LXG PF04740.12 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.025 14.3 10.5 0.04 13.6 10.2 1.6 1 1 0 1 1 1 0 LXG domain of WXG superfamily ApoLp-III PF07464.11 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.043 13.9 5.7 0.057 13.5 5.2 1.6 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Fib_alpha PF08702.10 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.21 11.8 16.0 0.16 12.1 6.2 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family LOH1CR12 PF10158.9 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.69 9.9 6.6 0.36 10.9 3.7 1.9 1 1 1 2 2 2 0 Tumour suppressor protein NPV_P10 PF05531.12 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.82 10.2 8.4 20 5.7 7.9 3.2 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ACCA PF03255.14 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 1.1 9.1 5.4 11 5.9 1.5 2.3 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF2935 PF11155.8 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 2.2 8.6 8.0 9.4 6.6 2.4 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) DUF1664 PF07889.12 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 6.7 6.8 7.7 2.4 8.2 2.2 2.4 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) Transglut_core2 PF13369.6 NODE_36890_length_580_cov_2.482569_g29695_i0reverse_frame_2 - 1.1e-29 103.0 0.0 1.6e-29 102.5 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily TPR_9 PF13371.6 NODE_36890_length_580_cov_2.482569_g29695_i0reverse_frame_2 - 8e-27 93.2 0.2 1.7e-26 92.1 0.2 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat Methyltransf_PK PF05891.12 NODE_36890_length_580_cov_2.482569_g29695_i0reverse_frame_2 - 0.077 12.5 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase CAF20 PF17052.5 NODE_36885_length_580_cov_3.466055_g29690_i0reverse_frame_3 - 0.019 15.1 0.6 0.019 15.1 0.6 1.4 1 1 0 1 1 1 0 Cap associated factor Bac_export_2 PF01312.19 NODE_36885_length_580_cov_3.466055_g29690_i0forward_frame_3 - 1.3e-67 228.3 0.3 1.6e-67 228.0 0.3 1.0 1 0 0 1 1 1 1 FlhB HrpN YscU SpaS Family DUF3561 PF12084.8 NODE_36885_length_580_cov_3.466055_g29690_i0forward_frame_3 - 1.4 9.0 7.8 0.22 11.5 2.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3561) BRX PF08381.11 NODE_36880_length_580_cov_56.500917_g29685_i0forward_frame_3 - 0.014 14.8 1.8 0.028 13.8 1.8 1.5 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 DUF1003 PF06210.11 NODE_36877_length_580_cov_77.532110_g29682_i0reverse_frame_3 - 0.47 10.6 2.5 0.96 9.6 2.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) Herpes_DNAp_acc PF04929.12 NODE_36835_length_581_cov_7.302198_g3213_i6reverse_frame_2 - 1.1 8.1 5.5 1.4 7.8 5.5 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor fn3_3 PF14686.6 NODE_36831_length_581_cov_59.686813_g13927_i1reverse_frame_3 - 0.00099 18.9 1.2 0.0023 17.7 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide lyase family 4, domain II Cytomega_UL84 PF06284.11 NODE_36831_length_581_cov_59.686813_g13927_i1reverse_frame_3 - 0.086 11.3 1.2 0.11 10.9 1.2 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein FlhD PF05247.13 NODE_36831_length_581_cov_59.686813_g13927_i1forward_frame_2 - 0.0083 16.4 0.0 0.016 15.5 0.0 1.4 1 0 0 1 1 1 1 Flagellar transcriptional activator (FlhD) Rft-1 PF04506.13 NODE_36817_length_581_cov_105.527473_g29628_i0reverse_frame_3 - 0.15 10.7 1.3 0.32 9.7 1.0 1.5 1 1 1 2 2 2 0 Rft protein Toxin_18 PF08087.11 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_3 - 0.091 12.8 2.5 1.7 8.7 0.0 2.9 3 0 0 3 3 3 0 Conotoxin O-superfamily RCC1_2 PF13540.6 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 4.6e-13 48.6 11.7 0.0038 17.0 0.7 5.1 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 2.5e-06 27.7 1.7 8.3 6.5 0.0 4.6 3 2 2 5 5 5 2 Uncharacterised ACR, YagE family COG1723 FtsQ PF03799.15 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 4.2e-05 24.4 0.2 19 6.1 0.0 4.4 1 1 4 5 5 5 0 Cell division protein FtsQ XRCC1_N PF01834.16 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 0.00077 19.5 0.7 3 7.9 0.1 3.0 2 1 1 3 3 3 2 XRCC1 N terminal domain DNA_pol3_tau_5 PF12170.8 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 0.00078 19.5 0.7 3.2 7.8 0.0 3.6 3 1 0 4 4 4 1 DNA polymerase III tau subunit V interacting with alpha DUF1120 PF06551.12 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 0.00091 19.4 2.1 16 5.7 0.0 4.4 1 1 4 5 5 5 0 Protein of unknown function (DUF1120) Glyco_hydro_88 PF07470.13 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 0.022 13.9 4.2 4.1 6.4 0.5 3.7 1 1 2 3 3 3 0 Glycosyl Hydrolase Family 88 Spectrin PF00435.21 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 0.051 14.1 3.2 33 5.0 0.0 3.8 2 2 1 3 3 3 0 Spectrin repeat Methyltransf_29 PF03141.16 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 0.052 12.1 2.1 9.5 4.6 0.1 3.1 2 1 2 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Beta-lactamase PF00144.24 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 0.1 11.8 7.1 0.47 9.6 0.1 3.5 1 1 3 4 4 4 0 Beta-lactamase AFP_2 PF18815.1 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 0.43 10.9 7.4 18 5.6 0.1 4.0 1 1 3 4 4 4 0 Bacterial antifreeze protein repeat Molybdopterin_N PF18364.1 NODE_36817_length_581_cov_105.527473_g29628_i0forward_frame_2 - 8.3 6.5 9.0 8.6 6.5 1.1 3.7 5 0 0 5 5 5 0 Molybdopterin oxidoreductase N-terminal domain DUF1944 PF09175.10 NODE_36816_length_581_cov_135.043956_g29627_i0forward_frame_2 - 0.065 13.1 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1944) LRR_4 PF12799.7 NODE_36813_length_581_cov_193.421245_g29624_i0reverse_frame_3 - 7.6e-05 23.0 0.2 15 6.2 0.0 4.4 3 1 2 5 5 5 2 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 NODE_36813_length_581_cov_193.421245_g29624_i0reverse_frame_3 - 0.0027 17.6 1.0 26 5.2 0.0 4.5 5 0 0 5 5 5 1 Leucine Rich repeat LRR_5 PF13306.6 NODE_36813_length_581_cov_193.421245_g29624_i0reverse_frame_3 - 0.042 13.8 0.1 0.82 9.6 0.0 2.2 2 0 0 2 2 2 0 BspA type Leucine rich repeat region (6 copies) LRR_12 PF18837.1 NODE_36813_length_581_cov_193.421245_g29624_i0reverse_frame_3 - 0.22 11.2 0.3 30 4.4 0.0 2.7 3 0 0 3 3 3 0 Leucine-rich repeat DUF4726 PF15855.5 NODE_36813_length_581_cov_193.421245_g29624_i0reverse_frame_2 - 0.014 15.6 0.0 0.028 14.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) ESPR PF13018.6 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_3 - 4 7.3 10.4 2.5e+02 1.6 0.1 6.9 9 0 0 9 9 9 0 Extended Signal Peptide of Type V secretion system Peptidase_M16_C PF05193.21 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_2 - 0.0065 16.5 3.7 61 3.6 0.0 6.4 1 1 6 7 7 7 1 Peptidase M16 inactive domain DUF1476 PF07345.11 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_2 - 3 8.2 22.9 52 4.3 0.1 7.9 1 1 8 9 9 9 0 ATPase inhibitor subunit zeta FNIP PF05725.12 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 6.8e-54 179.8 26.6 1.7e-13 50.5 1.8 5.1 3 2 1 5 5 5 5 FNIP Repeat LRR_5 PF13306.6 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 8.7e-09 35.4 3.1 0.00021 21.2 0.2 2.6 1 1 1 2 2 2 2 BspA type Leucine rich repeat region (6 copies) NosD PF05048.13 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.00018 20.9 0.0 0.75 9.0 0.0 1.8 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Phage_min_tail PF05939.13 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.0053 17.1 1.5 11 6.4 0.0 4.0 3 1 2 5 5 5 1 Phage minor tail protein DUF5536 PF17688.1 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.022 14.6 0.4 32 4.4 0.0 3.8 4 0 0 4 4 4 0 Family of unknown function (DUF5536) Glyco_hydro_65C PF03633.15 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.12 12.3 8.8 1.8e+02 2.2 0.0 6.7 8 0 0 8 8 8 0 Glycosyl hydrolase family 65, C-terminal domain AbiJ_NTD5 PF18865.1 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.19 11.5 1.8 61 3.5 0.0 3.9 5 0 0 5 5 5 0 AbiJ N-terminal domain 5 CaMKII_AD PF08332.10 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_2 - 0.00073 19.7 1.4 46 4.2 0.0 5.4 1 1 5 6 6 6 1 Calcium/calmodulin dependent protein kinase II association domain DUF2857 PF11198.8 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_2 - 1.6 8.5 2.7 9.2 6.0 0.6 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF2857) CwfJ_C_2 PF04676.14 NODE_36789_length_581_cov_21430.663004_g29607_i0reverse_frame_2 - 1.4e-17 64.4 0.2 2.6e-17 63.5 0.2 1.5 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 2 CwfJ_C_1 PF04677.15 NODE_36789_length_581_cov_21430.663004_g29607_i0reverse_frame_2 - 0.00073 19.4 0.0 0.0015 18.4 0.0 1.5 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 DUF2262 PF10020.9 NODE_36789_length_581_cov_21430.663004_g29607_i0reverse_frame_2 - 0.3 11.5 6.0 0.35 11.3 1.2 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2262) KdgT PF03812.13 NODE_36789_length_581_cov_21430.663004_g29607_i0forward_frame_2 - 0.015 14.6 1.9 0.02 14.2 1.9 1.1 1 0 0 1 1 1 0 2-keto-3-deoxygluconate permease Longin_2 PF18639.1 NODE_36779_length_582_cov_7.552102_g29597_i0reverse_frame_2 - 0.052 13.4 2.0 0.72 9.7 2.0 2.1 1 1 0 1 1 1 0 Yeast longin domain Methyltr_RsmB-F PF01189.17 NODE_36774_length_582_cov_83.700183_g29592_i0reverse_frame_2 - 1.8e-07 31.0 0.0 2.7e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F TSGA13 PF14994.6 NODE_36774_length_582_cov_83.700183_g29592_i0reverse_frame_2 - 0.054 12.9 0.1 0.079 12.3 0.1 1.2 1 0 0 1 1 1 0 Testis-specific gene 13 protein bPH_6 PF10756.9 NODE_36763_length_582_cov_101.903108_g29581_i0forward_frame_2 - 0.49 10.5 17.9 0.14 12.2 4.3 2.6 2 1 1 3 3 3 0 Bacterial PH domain DotA PF11388.8 NODE_36749_length_582_cov_221.550274_g29569_i0reverse_frame_3 - 0.051 13.8 0.1 0.085 13.1 0.1 1.3 1 0 0 1 1 1 0 Phagosome trafficking protein DotA HATPase_c PF02518.26 NODE_36749_length_582_cov_221.550274_g29569_i0forward_frame_3 - 0.018 15.5 0.0 0.029 14.9 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase REC104 PF17378.2 NODE_36737_length_582_cov_559.636197_g29194_i1reverse_frame_2 - 0.00089 19.1 0.1 0.0012 18.7 0.1 1.2 1 0 0 1 1 1 1 Meiotic recombination protein REC104 Gcn1_N PF12074.8 ORF99600 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Glycos_transf_1 PF00534.20 ORF98956 - 1.2e-29 103.1 0.0 1.4e-29 102.8 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF98956 - 1e-25 90.7 0.2 1.2e-25 90.5 0.2 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF98956 - 0.00098 19.5 0.0 0.0025 18.1 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 SH3_15 PF18346.1 ORF98288 - 0.014 15.7 0.1 0.025 14.9 0.1 1.3 1 0 0 1 1 1 0 Mind bomb SH3 repeat domain GP40 PF11025.8 ORF98288 - 0.062 13.1 0.0 3.7 7.3 0.0 2.1 2 0 0 2 2 2 0 Glycoprotein GP40 of Cryptosporidium DUF4314 PF14192.6 ORF98288 - 0.17 11.8 1.0 0.3 11.0 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4314) SPC25 PF06703.11 ORF97099 - 1.6e-20 73.5 1.8 1.9e-20 73.3 1.8 1.1 1 0 0 1 1 1 1 Microsomal signal peptidase 25 kDa subunit (SPC25) TGBp3 PF02495.17 ORF97099 - 0.11 12.1 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Triple gene block 3 Sugar_tr PF00083.24 ORF96550 - 7.3e-05 21.8 5.0 8.6e-05 21.6 5.0 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter Gcn1_N PF12074.8 ORF96105 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Ank_2 PF12796.7 ORF93702 - 3.6e-09 37.1 0.0 1.9e-08 34.8 0.0 1.9 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF93702 - 4.5e-07 30.0 0.1 0.021 15.3 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF93702 - 1.4e-05 25.5 0.2 0.04 14.5 0.1 3.4 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF93702 - 0.00024 21.3 0.4 1.8 9.4 0.0 3.2 3 1 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF93702 - 0.004 17.4 0.2 0.016 15.5 0.1 2.0 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Gcn1_N PF12074.8 ORF93216 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Lys-AminoMut_A PF09043.11 ORF90681 - 0.29 9.6 4.0 0.37 9.2 4.0 1.2 1 0 0 1 1 1 0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit RE_AlwI PF09491.10 ORF90681 - 0.72 8.6 6.0 0.84 8.4 6.0 1.1 1 0 0 1 1 1 0 AlwI restriction endonuclease Exonuc_VII_L PF02601.15 ORF90681 - 1.8 8.1 13.0 2.4 7.6 13.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit CDC45 PF02724.14 ORF90681 - 8.9 4.5 17.4 10 4.3 17.4 1.2 1 0 0 1 1 1 0 CDC45-like protein DFF40 PF09230.10 ORF90681 - 9.4 5.8 9.4 15 5.1 9.4 1.3 1 0 0 1 1 1 0 DNA fragmentation factor 40 kDa Gcn1_N PF12074.8 ORF89383 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal PPR_2 PF13041.6 ORF86682 - 7.7e-23 80.4 0.0 1e-06 28.8 0.0 4.1 1 1 3 4 4 4 4 PPR repeat family PPR_3 PF13812.6 ORF86682 - 6.5e-16 58.2 0.0 6.9e-09 35.7 0.0 2.4 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF86682 - 2.1e-13 49.5 1.4 0.0026 17.9 0.0 4.1 4 0 0 4 4 4 3 PPR repeat PPR_1 PF12854.7 ORF86682 - 3.4e-12 45.8 0.0 1.9e-05 24.2 0.0 4.2 5 0 0 5 5 5 3 PPR repeat PPR_long PF17177.4 ORF86682 - 0.00065 19.1 0.0 0.00091 18.6 0.0 1.3 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP ODV-E18 PF10717.9 ORF85365 - 0.025 14.5 0.0 0.057 13.3 0.0 1.7 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Sel1 PF08238.12 ORF84661 - 1.4e-18 66.9 9.4 1.7e-08 34.8 0.2 3.8 4 0 0 4 4 4 3 Sel1 repeat Herpes_ori_bp PF02399.15 ORF84661 - 0.032 12.3 0.0 0.041 11.9 0.0 1.0 1 0 0 1 1 1 0 Origin of replication binding protein DUF4406 PF14359.6 ORF84661 - 0.054 14.0 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4406) dCMP_cyt_deam_2 PF08211.12 ORF84402 - 0.03 14.5 0.0 0.044 14.0 0.0 1.3 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region ART PF01129.18 ORF82379 - 1.3e-08 34.4 0.0 2.1e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 ORF82379 - 0.0057 16.0 0.0 0.0077 15.6 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosyltransferase exoenzyme DUF4551 PF15087.6 ORF82075 - 0.23 10.3 10.5 0.27 10.0 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) ORC6 PF05460.13 ORF82075 - 1.9 7.7 16.4 2.5 7.3 16.4 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) tRNA-synt_1 PF00133.22 ORF81993 - 5.2e-14 51.4 0.0 6.4e-14 51.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 ORF81993 - 1.4e-09 37.3 0.1 2.2e-09 36.6 0.0 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (M) Abi_2 PF07751.11 ORF80420 - 0.053 13.8 0.1 0.073 13.3 0.1 1.2 1 0 0 1 1 1 0 Abi-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks105.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks105.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks105.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks105.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:48:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Histone PF00125.24 ORF79486 - 1.1e-06 29.0 1.8 4.6e-06 27.0 1.8 1.9 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 ORF79486 - 0.00049 20.2 0.6 0.0052 16.9 0.1 2.2 1 1 1 2 2 2 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF79486 - 0.00095 19.4 2.5 0.0027 17.9 0.2 2.5 3 0 0 3 3 3 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-S PF15630.6 ORF79486 - 0.026 14.9 0.0 0.1 13.0 0.0 1.9 2 0 0 2 2 2 0 CENP-S protein NUDE_C PF04880.13 ORF79210 - 0.0057 17.2 10.4 0.0077 16.7 10.4 1.2 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region Phlebovirus_G1 PF07243.11 ORF79210 - 0.0065 14.9 2.0 0.0083 14.6 2.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 DUF4538 PF15061.6 ORF79210 - 1.1 9.1 5.1 0.43 10.4 0.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF4140 PF13600.6 ORF79210 - 7.6 7.0 8.0 23 5.5 2.9 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Gcn1_N PF12074.8 ORF78716 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal LAM_C PF12544.8 ORF76231 - 0.035 14.3 0.7 0.063 13.5 0.7 1.6 1 0 0 1 1 1 0 Lysine-2,3-aminomutase LKAAEAR PF15478.6 ORF76231 - 0.52 10.6 5.9 2.8 8.2 5.9 2.2 1 1 0 1 1 1 0 Family of unknown function with LKAAEAR motif DnaJ_C PF01556.18 ORF75048 - 7.8e-25 87.7 0.0 9.7e-25 87.4 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.19 ORF75048 - 0.0014 18.9 1.8 0.0024 18.2 1.8 1.3 1 0 0 1 1 1 1 DnaJ central domain Shugoshin_C PF07557.11 ORF73059 - 0.1 12.4 0.2 0.1 12.4 0.2 2.1 3 0 0 3 3 3 0 Shugoshin C terminus Peptidase_M15 PF01427.17 ORF71524 - 1.1e-81 273.4 0.0 1.5e-81 272.9 0.0 1.2 1 0 0 1 1 1 1 D-ala-D-ala dipeptidase VanY PF02557.17 ORF71524 - 4.2e-07 29.8 0.5 8.7e-07 28.8 0.5 1.6 1 1 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Peptidase_M15_4 PF13539.6 ORF71524 - 0.053 14.0 0.1 0.1 13.1 0.1 1.6 1 1 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase DnaJ PF00226.31 ORF70921 - 3.1e-11 43.2 0.1 5.5e-11 42.4 0.1 1.3 1 0 0 1 1 1 1 DnaJ domain DASH_Spc19 PF08287.11 ORF70921 - 0.0098 15.8 0.1 0.016 15.1 0.1 1.3 1 0 0 1 1 1 1 Spc19 MADF_DNA_bdg PF10545.9 ORF70921 - 0.021 15.2 0.9 0.044 14.1 0.9 1.6 1 1 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like NEMO PF11577.8 ORF70921 - 0.089 12.8 1.2 0.15 12.1 0.4 1.8 2 0 0 2 2 2 0 NF-kappa-B essential modulator NEMO NUDE_C PF04880.13 ORF70596 - 0.0057 17.2 10.4 0.0077 16.7 10.4 1.2 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region Phlebovirus_G1 PF07243.11 ORF70596 - 0.0065 14.9 2.0 0.0083 14.6 2.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 DUF4538 PF15061.6 ORF70596 - 1.1 9.1 5.1 0.43 10.4 0.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF4140 PF13600.6 ORF70596 - 7.6 7.0 8.0 23 5.5 2.9 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Gcn1_N PF12074.8 ORF68252 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal TTL PF03133.15 ORF67953 - 2.7e-09 36.6 0.0 3.4e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF67953 - 1.2e-05 24.7 0.1 2.5e-05 23.7 0.1 1.7 1 1 0 1 1 1 1 YheC/D like ATP-grasp RimK PF08443.11 ORF67953 - 0.00013 21.6 0.0 0.0002 21.0 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_ST PF14397.6 ORF67953 - 0.017 14.4 0.0 0.024 13.9 0.0 1.1 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF67953 - 0.14 11.6 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus Gcn1_N PF12074.8 ORF67657 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Kelch_1 PF01344.25 ORF67599 - 0.00025 20.6 1.7 0.0087 15.6 0.4 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF67599 - 0.0012 19.1 0.4 0.87 10.0 0.2 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF67599 - 0.023 14.7 2.6 0.27 11.3 0.5 2.2 2 0 0 2 2 2 0 Kelch motif Orf78 PF06024.12 ORF67404 - 0.1 12.9 5.0 0.21 11.9 5.0 1.4 1 0 0 1 1 1 0 Orf78 (ac78) IF3_C PF00707.22 ORF66041 - 1.3e-09 37.9 0.5 2.3e-09 37.1 0.5 1.5 1 1 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain Type_III_YscX PF09474.10 ORF66041 - 0.0076 16.5 0.2 1.1 9.6 0.1 2.2 1 1 1 2 2 2 2 Type III secretion system YscX (type_III_YscX) Cactin_mid PF10312.9 ORF66041 - 0.03 14.1 0.2 0.047 13.4 0.2 1.3 1 0 0 1 1 1 0 Conserved mid region of cactin Glyco_transf_56 PF07429.11 ORF6547 - 3.2e-94 316.0 0.0 3.6e-94 315.8 0.0 1.0 1 0 0 1 1 1 1 4-alpha-L-fucosyltransferase glycosyl transferase group 56 Epimerase_2 PF02350.19 ORF6547 - 0.0019 17.1 0.0 0.0046 15.9 0.0 1.5 1 1 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase SelP_N PF04592.14 ORF61805 - 0.12 11.7 0.1 0.21 11.0 0.1 1.3 1 0 0 1 1 1 0 Selenoprotein P, N terminal region His_Phos_1 PF00300.22 ORF60814 - 1.8e-15 57.1 0.0 3.4e-15 56.3 0.0 1.4 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Rad60-SLD PF11976.8 ORF60705 - 0.0013 18.5 0.1 0.0099 15.7 0.0 2.2 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like YukD PF08817.10 ORF60705 - 0.0024 18.5 0.0 0.0054 17.4 0.0 1.6 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD ubiquitin PF00240.23 ORF60705 - 0.021 14.6 0.0 0.047 13.4 0.0 1.6 1 0 0 1 1 1 0 Ubiquitin family TmoB PF06234.12 ORF60705 - 0.13 12.3 0.0 0.33 11.0 0.0 1.7 1 0 0 1 1 1 0 Toluene-4-monooxygenase system protein B (TmoB) RAWUL PF16207.5 ORF60705 - 0.2 12.4 0.0 0.42 11.3 0.0 1.5 1 0 0 1 1 1 0 RAWUL domain RING finger- and WD40-associated ubiquitin-like RFamide_26RFa PF11109.8 ORF60705 - 0.38 11.3 5.3 0.61 10.6 5.3 1.3 1 0 0 1 1 1 0 Orexigenic neuropeptide Qrfp/P518 ATP-synt_E PF05680.12 ORF60705 - 1.2 9.5 8.1 2.6 8.4 8.1 1.5 1 0 0 1 1 1 0 ATP synthase E chain MAJIN PF15077.6 ORF60705 - 6.2 6.5 6.4 8.8 6.0 6.4 1.1 1 0 0 1 1 1 0 Membrane-anchored junction protein Gcn1_N PF12074.8 ORF57259 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Pex2_Pex12 PF04757.14 ORF56547 - 1.5e-18 67.2 11.4 1.9e-10 40.8 0.4 2.0 1 1 1 2 2 2 2 Pex2 / Pex12 amino terminal region Kelch_1 PF01344.25 ORF54340 - 0.00025 20.6 1.7 0.0087 15.6 0.4 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF54340 - 0.0012 19.1 0.4 0.87 10.0 0.2 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF54340 - 0.023 14.7 2.6 0.27 11.3 0.5 2.2 2 0 0 2 2 2 0 Kelch motif DUF4551 PF15087.6 ORF52318 - 0.23 10.3 10.5 0.27 10.0 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) ORC6 PF05460.13 ORF52318 - 1.9 7.7 16.4 2.5 7.3 16.4 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Pkinase PF00069.25 ORF51782 - 2.3e-20 73.1 0.0 3.8e-20 72.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF51782 - 1.7e-08 34.1 0.0 2.9e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF51782 - 5.8e-05 22.6 0.0 9.7e-05 21.8 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Mak16 PF04874.14 ORF51782 - 0.077 13.6 7.1 0.11 13.1 7.1 1.3 1 0 0 1 1 1 0 Mak16 protein C-terminal region SIR4_SID PF16991.5 ORF51782 - 0.59 10.2 6.6 0.98 9.4 6.6 1.3 1 0 0 1 1 1 0 Sir4 SID domain DUF72 PF01904.18 ORF47632 - 0.00043 20.4 0.0 0.00051 20.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF72 Peptidase_S10 PF00450.22 ORF46739 - 2.7e-59 201.7 1.7 3e-59 201.5 1.7 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase ACP_PD PF04336.12 ORF46674 - 8.6e-29 100.0 2.6 1.3e-28 99.5 2.6 1.3 1 0 0 1 1 1 1 Acyl carrier protein phosphodiesterase Ank_2 PF12796.7 ORF46575 - 2.6e-33 114.4 7.8 1e-19 70.9 1.7 2.4 1 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF46575 - 9.5e-28 96.2 8.8 2e-09 37.8 0.1 4.0 2 1 3 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF46575 - 1.4e-21 76.2 7.6 4.2e-07 30.1 0.2 4.8 2 2 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF46575 - 6.1e-21 72.3 1.8 0.0023 18.3 0.0 5.7 6 0 0 6 6 6 5 Ankyrin repeat Ank PF00023.30 ORF46575 - 8.1e-21 73.5 11.3 3.5e-05 24.0 0.1 6.1 6 0 0 6 6 6 5 Ankyrin repeat Swi3 PF07962.12 ORF46171 - 5.9e-13 48.6 0.2 1e-12 47.9 0.2 1.3 1 0 0 1 1 1 1 Replication Fork Protection Component Swi3 DUF3619 PF12279.8 ORF46171 - 0.0043 17.4 1.9 0.0071 16.7 1.9 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3619) DUF1682 PF07946.14 ORF46171 - 6.9 5.8 8.6 9.6 5.3 8.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) STIMATE PF12400.8 ORF42090 - 4.1e-32 111.4 5.7 5.1e-32 111.0 5.7 1.1 1 0 0 1 1 1 1 STIMATE family DUF4304 PF14137.6 ORF40759 - 0.01 15.9 0.4 0.69 10.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4304) AHSA1 PF08327.11 ORF40759 - 0.02 15.1 0.0 0.04 14.1 0.0 1.4 1 0 0 1 1 1 0 Activator of Hsp90 ATPase homolog 1-like protein Mito_carr PF00153.27 ORF37908 - 7.4e-06 25.8 0.0 2.5e-05 24.1 0.0 1.7 1 1 1 2 2 2 1 Mitochondrial carrier protein A_deaminase PF00962.22 ORF35196 - 1.1e-26 94.0 0.0 1.2e-26 93.8 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase DUF5021 PF16424.5 ORF35196 - 0.045 13.6 0.0 0.071 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5021) DUF2390 PF09523.10 ORF35084 - 0.061 13.6 1.2 0.14 12.5 0.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2390) Gcn1_N PF12074.8 ORF33611 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Ring_hydroxyl_B PF00866.18 ORF32768 - 0.1 12.6 0.1 0.22 11.6 0.0 1.6 2 0 0 2 2 2 0 Ring hydroxylating beta subunit Aminotran_4 PF01063.19 ORF32199 - 1.3e-12 48.0 0.0 1.6e-12 47.8 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV MFS_1 PF07690.16 ORF31582 - 0.012 14.6 12.6 0.015 14.2 12.6 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF31582 - 0.034 13.0 1.9 0.042 12.7 1.9 1.1 1 0 0 1 1 1 0 MFS_1 like family Toxin_16 PF07945.11 ORF31582 - 0.14 12.0 4.9 0.51 10.3 0.9 2.4 2 0 0 2 2 2 0 Janus-atracotoxin ERGIC_N PF13850.6 ORF29368 - 4.6e-11 42.9 0.9 9.7e-11 41.9 0.3 1.9 2 0 0 2 2 2 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) COPIIcoated_ERV PF07970.12 ORF29368 - 0.09 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Endoplasmic reticulum vesicle transporter Ax_dynein_light PF10211.9 ORF29004 - 0.028 14.3 15.8 0.28 11.1 1.5 2.4 1 1 1 2 2 2 0 Axonemal dynein light chain APG6_N PF17675.1 ORF29004 - 1.2 9.7 11.9 0.39 11.2 7.0 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region ROS_MUCR PF05443.11 ORF28657 - 0.04 14.0 0.5 0.064 13.3 0.5 1.4 1 1 0 1 1 1 0 ROS/MUCR transcriptional regulator protein DUF2813 PF11398.8 ORF28657 - 0.052 12.8 0.1 0.066 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) TPR_1 PF00515.28 ORF28613 - 4e-08 32.7 7.2 3.3e-05 23.5 0.3 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF28613 - 4.5e-08 32.6 1.5 0.00071 19.5 0.2 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF28613 - 5.2e-07 29.7 0.0 7.2e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF28613 - 1.7e-06 27.8 1.3 0.00087 19.3 0.1 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF28613 - 0.0016 18.7 0.1 0.0061 16.9 0.1 2.0 1 0 0 1 1 1 1 Tetratricopeptide repeat DUF2951 PF11166.8 ORF28613 - 0.015 15.5 1.6 0.024 14.8 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) Fis1_TPR_C PF14853.6 ORF28613 - 0.02 14.9 0.5 0.39 10.8 0.1 2.4 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_19 PF14559.6 ORF28613 - 0.026 15.1 0.1 0.04 14.4 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF28613 - 0.028 15.1 0.2 1.6 9.5 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat KAR9 PF08580.10 ORF27970 - 0.35 9.4 2.2 0.41 9.1 2.2 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 Gcn1_N PF12074.8 ORF25981 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal CBM_20 PF00686.19 ORF2335 - 3.6e-16 58.9 0.7 5.6e-16 58.2 0.7 1.3 1 0 0 1 1 1 1 Starch binding domain Gcn1_N PF12074.8 ORF23264 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Gcn1_N PF12074.8 ORF22161 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal DUF4393 PF14337.6 ORF22097 - 0.07 12.9 0.6 0.17 11.7 0.3 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4393) Peptidase_C1 PF00112.23 ORF20172 - 1.3e-25 90.7 1.1 1.7e-25 90.4 1.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF20172 - 0.00095 19.0 0.0 0.0024 17.7 0.0 1.6 1 1 0 1 1 1 1 Peptidase family C1 propeptide UPF0227 PF05728.12 ORF19966 - 1.9e-74 249.7 0.0 2.1e-74 249.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) Abhydrolase_6 PF12697.7 ORF19966 - 0.0012 19.5 0.4 0.078 13.6 0.2 2.1 1 1 1 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF19966 - 0.032 13.5 0.0 0.17 11.1 0.0 1.9 1 1 0 2 2 2 0 Serine aminopeptidase, S33 Gcn1_N PF12074.8 ORF18544 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Histone PF00125.24 ORF18346 - 1.1e-06 29.0 1.8 4.6e-06 27.0 1.8 1.9 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 ORF18346 - 0.00049 20.2 0.6 0.0052 16.9 0.1 2.2 1 1 1 2 2 2 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF18346 - 0.00095 19.4 2.5 0.0027 17.9 0.2 2.5 3 0 0 3 3 3 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-S PF15630.6 ORF18346 - 0.026 14.9 0.0 0.1 13.0 0.0 1.9 2 0 0 2 2 2 0 CENP-S protein Abi_2 PF07751.11 ORF18344 - 0.053 13.8 0.1 0.073 13.3 0.1 1.2 1 0 0 1 1 1 0 Abi-like protein NPA PF16469.5 ORF1532 - 0.025 15.2 1.1 0.044 14.4 1.1 1.3 1 0 0 1 1 1 0 Nematode polyprotein allergen ABA-1 Dzip-like_N PF13815.6 ORF1532 - 1.8 8.5 5.5 4.6 7.2 2.7 2.2 1 1 1 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal IFT20 PF14931.6 ORF1532 - 2.1 8.5 7.9 2.5 8.3 3.7 2.3 1 1 1 2 2 2 0 Intraflagellar transport complex B, subunit 20 DUF2621 PF11084.8 ORF14594 - 0.1 12.6 0.1 0.24 11.4 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2621) RINGv PF12906.7 ORF1404 - 1.1 9.4 5.4 3.1 8.0 1.5 2.7 2 0 0 2 2 2 0 RING-variant domain DUF4304 PF14137.6 ORF12224 - 0.01 15.9 0.4 0.69 10.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4304) AHSA1 PF08327.11 ORF12224 - 0.02 15.1 0.0 0.04 14.1 0.0 1.4 1 0 0 1 1 1 0 Activator of Hsp90 ATPase homolog 1-like protein NUDE_C PF04880.13 ORF112407 - 0.0057 17.2 10.4 0.0077 16.7 10.4 1.2 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region Phlebovirus_G1 PF07243.11 ORF112407 - 0.0065 14.9 2.0 0.0083 14.6 2.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 DUF4538 PF15061.6 ORF112407 - 1.1 9.1 5.1 0.43 10.4 0.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF4140 PF13600.6 ORF112407 - 7.6 7.0 8.0 23 5.5 2.9 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Galactosyl_T PF01762.21 ORF111793 - 0.00044 20.1 0.0 0.0006 19.7 0.0 1.1 1 0 0 1 1 1 1 Galactosyltransferase DUF1244 PF06844.11 ORF111793 - 0.071 13.3 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1244) dsrm PF00035.26 ORF110395 - 0.00011 22.8 0.0 0.00026 21.6 0.0 1.6 1 0 0 1 1 1 1 Double-stranded RNA binding motif KH_1 PF00013.29 ORF110395 - 0.0033 17.2 0.0 0.0073 16.1 0.0 1.6 1 0 0 1 1 1 1 KH domain DUF3933 PF13069.6 ORF110395 - 0.16 11.9 0.2 0.32 10.9 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3933) HNH_repeat PF18780.1 ORF110395 - 0.17 11.7 0.6 0.17 11.7 0.6 1.9 2 0 0 2 2 2 0 Homing endonuclease repeat DUF620 PF04788.12 ORF11028 - 0.18 11.2 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF620) CRAL_TRIO PF00650.20 ORF110108 - 4.6e-14 52.4 0.0 5.9e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF110108 - 0.062 13.5 0.0 0.074 13.2 0.0 1.2 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain Hydrolase_4 PF12146.8 ORF109529 - 0.053 12.8 0.0 0.069 12.4 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Acid_PPase PF12689.7 ORF108667 - 5.4e-44 150.0 0.0 6.4e-44 149.8 0.0 1.0 1 0 0 1 1 1 1 Acid Phosphatase NIF PF03031.18 ORF108667 - 0.13 12.0 0.0 0.21 11.3 0.0 1.3 1 1 0 1 1 1 0 NLI interacting factor-like phosphatase Gcn1_N PF12074.8 ORF108260 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Prefoldin PF02996.17 ORF107654 - 2.4e-26 92.0 0.2 3.9e-26 91.3 0.2 1.3 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 ORF107654 - 0.00038 20.4 0.1 0.21 11.6 0.0 2.4 2 0 0 2 2 2 2 Prefoldin subunit Dynactin PF12455.8 ORF107654 - 0.0069 15.7 0.9 0.59 9.3 0.1 2.1 2 0 0 2 2 2 2 Dynein associated protein End3 PF12761.7 ORF107654 - 0.011 15.9 0.8 0.053 13.7 0.3 2.1 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 Syntaxin-6_N PF09177.11 ORF107654 - 0.018 15.5 4.2 1.4 9.6 0.4 2.2 1 1 1 2 2 2 0 Syntaxin 6, N-terminal EzrA PF06160.12 ORF107654 - 0.032 12.4 2.8 0.4 8.8 0.1 2.0 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA DUF573 PF04504.14 ORF107654 - 0.065 13.9 1.1 2.7 8.7 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function, DUF573 Phage_ABA_S PF18066.1 ORF107654 - 0.093 13.4 0.1 0.21 12.3 0.1 1.6 1 1 0 1 1 1 0 Phage ABA sandwich domain Muted PF14942.6 ORF107654 - 0.12 12.7 2.2 0.21 11.9 0.2 2.0 2 0 0 2 2 2 0 Organelle biogenesis, Muted-like protein DUF3685 PF12452.8 ORF107262 - 0.043 13.5 0.7 0.27 10.9 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3685) Taxilin PF09728.9 ORF107262 - 0.17 11.0 23.4 0.014 14.6 12.0 2.2 2 0 0 2 2 2 0 Myosin-like coiled-coil protein DUF4358 PF14270.6 ORF107262 - 1.5 9.2 5.1 6.7 7.1 0.2 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4358) Gcn1_N PF12074.8 ORF107106 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Gcn1_N PF12074.8 ORF106677 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal TRP PF06011.12 ORF106430 - 0.0012 17.6 6.7 0.002 16.9 6.7 1.5 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel Rad51 PF08423.11 ORF103527 - 8.7e-15 54.7 0.0 1e-14 54.4 0.0 1.1 1 0 0 1 1 1 1 Rad51 Ank_2 PF12796.7 ORF100803 - 2.5e-28 98.5 0.6 2.6e-12 47.2 0.0 3.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF100803 - 3.6e-28 97.3 4.3 2.4e-05 24.5 0.0 5.2 2 1 3 5 5 5 5 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF100803 - 1.2e-26 92.7 1.8 1.6e-11 44.4 0.1 3.5 3 1 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF100803 - 1.9e-24 85.0 3.2 0.00052 20.3 0.0 5.7 6 0 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 ORF100803 - 2.2e-21 73.6 1.2 0.0013 19.0 0.0 5.4 6 0 0 6 6 6 4 Ankyrin repeat DnaJ PF00226.31 NODE_37175_length_574_cov_4.443414_g29954_i0reverse_frame_1 - 2.5e-17 62.7 7.4 9.7e-17 60.9 1.4 3.0 2 1 0 2 2 2 1 DnaJ domain PAP_RNA-bind PF04926.15 NODE_37175_length_574_cov_4.443414_g29954_i0reverse_frame_1 - 0.026 14.1 2.0 0.034 13.8 2.0 1.2 1 0 0 1 1 1 0 Poly(A) polymerase predicted RNA binding domain PBP1_TM PF14812.6 NODE_37175_length_574_cov_4.443414_g29954_i0reverse_frame_1 - 0.052 13.9 4.5 0.13 12.6 4.5 1.7 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal TRAP_alpha PF03896.16 NODE_37175_length_574_cov_4.443414_g29954_i0reverse_frame_1 - 0.18 11.0 3.2 0.27 10.4 3.2 1.3 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit MetOD2 PF18548.1 NODE_37171_length_574_cov_46.194805_g29950_i0reverse_frame_1 - 0.013 15.6 8.5 0.013 15.6 8.5 2.3 1 1 1 2 2 2 0 Metanogen output domain 2 Lipoprotein_7 PF01540.16 NODE_37171_length_574_cov_46.194805_g29950_i0reverse_frame_1 - 0.12 11.7 23.7 0.17 11.2 23.7 1.3 1 1 0 1 1 1 0 Adhesin lipoprotein Chordopox_E11 PF06138.12 NODE_37168_length_574_cov_75.653061_g29948_i0reverse_frame_1 - 0.037 14.3 0.0 0.059 13.7 0.0 1.3 1 0 0 1 1 1 0 Chordopoxvirus E11 protein DUF2897 PF11446.8 NODE_37147_length_574_cov_162.651206_g2903_i3reverse_frame_1 - 0.011 15.6 1.3 0.02 14.8 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) ABC_tran PF00005.27 NODE_37123_length_575_cov_3.659259_g29908_i0forward_frame_1 - 1.1e-16 61.5 0.0 1.6e-16 61.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_37123_length_575_cov_3.659259_g29908_i0forward_frame_1 - 4.4e-07 30.0 0.0 6.3e-07 29.5 0.0 1.3 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 NODE_37123_length_575_cov_3.659259_g29908_i0forward_frame_1 - 0.013 14.9 0.1 0.017 14.5 0.1 1.3 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain oligo_HPY PF08352.12 NODE_37123_length_575_cov_3.659259_g29908_i0forward_frame_1 - 0.18 12.3 0.1 0.43 11.1 0.1 1.7 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region DUF4618 PF15397.6 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 4.8e-06 26.2 20.3 0.00088 18.8 0.6 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4618) Mitofilin PF09731.9 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.0042 16.0 8.1 0.0042 16.0 8.1 2.0 1 1 1 2 2 2 1 Mitochondrial inner membrane protein PspA_IM30 PF04012.12 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.0053 16.4 2.4 0.0053 16.4 2.4 2.3 1 1 1 2 2 2 1 PspA/IM30 family TMF_DNA_bd PF12329.8 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.0063 16.5 10.3 0.029 14.3 1.5 4.2 1 1 4 5 5 5 3 TATA element modulatory factor 1 DNA binding TPR_MLP1_2 PF07926.12 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.0072 16.4 3.1 0.0072 16.4 3.1 3.6 1 1 0 2 2 2 1 TPR/MLP1/MLP2-like protein GrpE PF01025.19 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.0072 16.0 27.4 0.97 9.1 3.4 2.9 1 1 1 2 2 2 2 GrpE DUF4407 PF14362.6 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.0079 15.6 20.3 0.25 10.7 8.3 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4407) Spc7 PF08317.11 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.0092 14.9 2.2 0.0092 14.9 2.2 2.9 1 1 1 2 2 2 1 Spc7 kinetochore protein Filament PF00038.21 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.013 15.2 22.9 0.27 10.8 23.0 2.2 1 1 0 1 1 1 0 Intermediate filament protein TolA_bind_tri PF16331.5 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.017 15.2 22.2 0.022 14.8 0.8 3.7 1 1 2 3 3 3 0 TolA binding protein trimerisation Snapin_Pallidin PF14712.6 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.024 15.0 6.5 0.024 15.0 6.5 3.1 3 1 0 3 3 3 0 Snapin/Pallidin Phage_int_SAM_2 PF12834.7 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.028 15.1 5.0 0.14 12.8 0.8 2.4 2 0 0 2 2 2 0 Phage integrase, N-terminal TACC_C PF05010.14 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.036 13.9 20.9 1.3 8.7 21.0 2.2 1 1 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Cytochrom_B562 PF07361.11 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.078 13.6 15.5 0.099 13.3 1.9 3.2 1 1 2 3 3 3 0 Cytochrome b562 ADIP PF11559.8 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.099 12.7 26.0 0.25 11.4 5.5 2.9 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding IF-2B PF01008.17 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.12 11.6 3.8 0.068 12.4 1.5 1.7 1 1 1 2 2 2 0 Initiation factor 2 subunit family Lectin_N PF03954.14 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.14 11.9 9.7 0.067 12.9 0.8 2.4 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain BLOC1_2 PF10046.9 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.16 12.3 19.2 0.95 9.8 0.7 3.2 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF2855 PF11017.8 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.26 11.0 1.3 0.28 10.9 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) GAS PF13851.6 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.26 10.6 28.4 1.1 8.5 20.8 2.2 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding FUSC PF04632.12 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.36 9.3 2.9 0.57 8.7 2.9 1.4 1 1 0 1 1 1 0 Fusaric acid resistance protein family Fib_alpha PF08702.10 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.37 11.0 21.8 0.88 9.7 4.2 3.0 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family DUF3450 PF11932.8 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.45 9.8 22.5 0.05 12.9 5.6 3.1 1 1 3 4 4 4 0 Protein of unknown function (DUF3450) Golgin_A5 PF09787.9 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.46 9.9 24.3 0.35 10.3 20.0 1.9 1 1 1 2 2 2 0 Golgin subfamily A member 5 DOG1 PF14144.6 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.65 10.3 2.1 0.87 9.9 0.6 2.0 2 0 0 2 2 1 0 Seed dormancy control DUF1515 PF07439.11 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.74 9.9 7.8 4.4 7.4 0.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) DUF948 PF06103.11 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.8 10.0 12.1 8.6 6.7 0.1 3.2 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) BST2 PF16716.5 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 0.9 10.2 22.1 3.2 8.4 3.7 4.2 1 1 3 4 4 4 0 Bone marrow stromal antigen 2 ABC2_membrane_3 PF12698.7 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 1 8.4 2.0 1.1 8.3 2.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein OmpH PF03938.14 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 1.5 9.2 21.6 3.2 8.1 4.9 2.3 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) GBP_C PF02841.14 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 1.6 8.1 20.8 0.062 12.7 11.4 2.0 1 1 1 2 2 2 0 Guanylate-binding protein, C-terminal domain DUF4472 PF14739.6 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 2.1 9.1 18.4 0.13 13.0 8.5 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) Tropomyosin_1 PF12718.7 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 2.1 8.5 31.9 0.64 10.2 16.1 2.9 1 1 2 3 3 3 0 Tropomyosin like DUF4094 PF13334.6 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 2.3 8.7 12.9 3.7 8.0 3.0 3.4 1 1 2 3 3 3 0 Domain of unknown function (DUF4094) CorA PF01544.18 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 2.4 7.4 19.1 0.4 10.0 13.3 2.2 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein DUF1664 PF07889.12 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 2.6 8.1 13.7 1.3 9.1 3.4 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Jnk-SapK_ap_N PF09744.9 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 2.8 8.2 27.0 0.43 10.8 11.6 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 SlyX PF04102.12 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 2.8 8.6 16.3 0.98 10.1 3.5 3.7 1 1 2 3 3 3 0 SlyX TMPIT PF07851.13 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 3 7.0 18.0 2 7.6 3.7 2.1 1 1 1 2 2 2 0 TMPIT-like protein USP8_interact PF08941.10 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 3.1 7.6 9.7 0.72 9.6 0.7 2.4 1 1 2 3 3 3 0 USP8 interacting KxDL PF10241.9 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 3.5 8.0 17.2 11 6.3 2.1 3.7 1 1 2 3 3 3 0 Uncharacterized conserved protein DUF4200 PF13863.6 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 3.7 8.0 28.7 6.6 7.2 15.0 3.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF1043 PF06295.12 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 4.8 7.2 16.0 1 9.3 7.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) TSNAXIP1_N PF15739.5 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 4.8 7.6 15.7 16 5.9 1.6 3.3 1 1 2 3 3 3 0 Translin-associated factor X-interacting N-terminus ZapB PF06005.12 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 5.5 7.5 25.3 0.87 10.1 3.2 3.8 1 1 3 4 4 4 0 Cell division protein ZapB zf-C4H2 PF10146.9 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 5.5 7.2 23.2 8.8 6.6 1.8 2.7 1 1 1 2 2 2 0 Zinc finger-containing protein Atg14 PF10186.9 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 5.6 5.9 26.7 0.42 9.7 18.2 2.2 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Phage_HK97_TLTM PF06120.11 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_1 - 6.3 5.9 21.7 3.5e+03 -3.1 21.7 2.3 1 1 0 1 1 1 0 Tail length tape measure protein DUF3474 PF11960.8 NODE_37107_length_575_cov_102.627778_g29893_i0forward_frame_1 - 0.093 12.9 0.9 0.19 11.9 0.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3474) UreD PF01774.17 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_1 - 0.26 11.2 1.0 10 6.0 0.0 2.6 2 1 1 3 3 3 0 UreD urease accessory protein JSRP PF15312.6 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_1 - 4.8 7.2 14.8 5.7 6.9 0.2 4.4 2 2 3 5 5 5 0 Junctional sarcoplasmic reticulum protein DUF4190 PF13828.6 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_1 - 0.11 12.3 0.0 1.5e+02 2.3 0.0 3.8 4 0 0 4 4 4 0 Domain of unknown function (DUF4190) Pyridoxal_deC PF00282.19 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_1 - 0.17 10.6 7.9 8 5.1 0.1 3.9 4 0 0 4 4 4 0 Pyridoxal-dependent decarboxylase conserved domain SHIPPO-rpt PF07004.12 NODE_37080_length_576_cov_2.922366_g29867_i0forward_frame_1 - 5.2 8.2 7.0 6.2 7.9 0.7 2.5 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat DUF2817 PF10994.8 NODE_37075_length_576_cov_4.842884_g29862_i0forward_frame_1 - 0.0027 17.2 1.0 0.0036 16.8 1.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2817) DUF769 PF05590.11 NODE_37075_length_576_cov_4.842884_g29862_i0forward_frame_1 - 0.0068 15.9 1.9 0.0084 15.6 1.9 1.1 1 0 0 1 1 1 1 Xylella fastidiosa protein of unknown function (DUF769) MORN PF02493.20 NODE_37044_length_576_cov_243.560074_g29835_i0reverse_frame_1 - 4e-21 73.6 46.3 1e-06 28.3 0.8 7.5 8 0 0 8 8 8 5 MORN repeat ESP PF16590.5 NODE_37038_length_576_cov_6032.057301_g19647_i5forward_frame_1 - 0.035 14.4 0.1 0.05 13.9 0.1 1.3 1 0 0 1 1 1 0 Exocrine gland-secreting peptide Rubredoxin PF00301.20 NODE_37030_length_577_cov_3.865314_g29822_i0reverse_frame_2 - 0.05 13.6 0.0 0.099 12.7 0.0 1.4 1 0 0 1 1 1 0 Rubredoxin Lentivirus_VIF PF05851.11 NODE_37030_length_577_cov_3.865314_g29822_i0forward_frame_3 - 0.035 13.0 0.1 0.049 12.5 0.1 1.1 1 0 0 1 1 1 0 Lentivirus virion infectivity factor (VIF) zf-C2H2 PF00096.26 NODE_37029_length_577_cov_5.998155_g29821_i0reverse_frame_2 - 0.006 17.0 1.2 0.006 17.0 1.2 2.2 2 0 0 2 2 2 1 Zinc finger, C2H2 type Cas_Cas4 PF01930.17 NODE_37028_length_577_cov_9.470480_g29820_i0reverse_frame_2 - 0.0013 18.9 1.0 0.0013 18.9 1.0 1.5 2 0 0 2 2 2 1 Domain of unknown function DUF83 Bowman-Birk_leg PF00228.20 NODE_37027_length_577_cov_11.619926_g29819_i0forward_frame_3 - 0.48 10.9 0.2 0.48 10.9 0.2 1.8 2 0 0 2 2 2 0 Bowman-Birk serine protease inhibitor family MotCF PF09158.10 NODE_37021_length_577_cov_90.049815_g29814_i0forward_frame_3 - 0.17 11.9 1.1 0.28 11.3 1.1 1.3 1 0 0 1 1 1 0 Bacteriophage T4 MotA, C-terminal UCH PF00443.29 NODE_37013_length_577_cov_114.485240_g13051_i1reverse_frame_3 - 1.2e-15 57.7 1.0 1.6e-15 57.3 0.1 1.6 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_37013_length_577_cov_114.485240_g13051_i1reverse_frame_3 - 2.2e-05 24.2 2.3 2.9e-05 23.8 0.1 1.9 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase Sirohm_synth_C PF14823.6 NODE_37013_length_577_cov_114.485240_g13051_i1reverse_frame_2 - 0.04 13.6 2.1 0.51 10.0 0.1 2.5 2 1 0 2 2 2 0 Sirohaem biosynthesis protein C-terminal CDC50 PF03381.15 NODE_37013_length_577_cov_114.485240_g13051_i1forward_frame_2 - 0.11 12.0 1.6 0.12 11.9 1.6 1.2 1 0 0 1 1 1 0 LEM3 (ligand-effect modulator 3) family / CDC50 family ADSL_C PF10397.9 NODE_37010_length_577_cov_145.071956_g29805_i0reverse_frame_2 - 0.081 13.5 0.0 0.14 12.7 0.0 1.4 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminus YHS PF04945.13 NODE_36977_length_578_cov_5.384899_g29776_i0forward_frame_3 - 0.14 12.3 0.4 0.44 10.7 0.2 1.9 2 0 0 2 2 2 0 YHS domain MORN PF02493.20 NODE_36971_length_578_cov_90.497238_g29771_i0forward_frame_3 - 2.6e-39 130.8 44.7 6.7e-09 35.1 1.7 6.2 6 0 0 6 6 6 6 MORN repeat RsmJ PF04378.13 NODE_36969_length_578_cov_93.795580_g29770_i0reverse_frame_3 - 7.5e-24 84.3 0.0 9.2e-24 84.0 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA large subunit methyltransferase D, RlmJ Cons_hypoth95 PF03602.15 NODE_36969_length_578_cov_93.795580_g29770_i0reverse_frame_3 - 5.4e-05 22.9 0.0 8.4e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MotA_ExbB PF01618.16 NODE_36964_length_578_cov_107.300184_g29765_i0reverse_frame_2 - 0.12 12.1 0.1 0.23 11.2 0.1 1.5 2 0 0 2 2 2 0 MotA/TolQ/ExbB proton channel family GTP_EFTU PF00009.27 NODE_36955_length_578_cov_316.821363_g29756_i0reverse_frame_2 - 1.6e-35 122.4 0.0 2e-35 122.1 0.0 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_36955_length_578_cov_316.821363_g29756_i0reverse_frame_2 - 0.0038 17.3 0.1 0.031 14.4 0.1 2.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase NinF PF05810.12 NODE_36952_length_578_cov_656.202578_g29753_i0reverse_frame_2 - 0.075 12.9 3.9 0.6 10.0 3.0 2.2 2 0 0 2 2 2 0 NinF protein zf-ANAPC11 PF12861.7 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_2 - 0.00034 20.6 2.8 0.00037 20.5 1.6 1.7 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger ATP11 PF06644.11 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_2 - 0.025 14.4 0.2 0.035 13.9 0.2 1.1 1 0 0 1 1 1 0 ATP11 protein zf-rbx1 PF12678.7 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_2 - 0.057 13.7 2.0 0.11 12.7 2.0 1.5 1 0 0 1 1 1 0 RING-H2 zinc finger domain MCM_OB PF17207.3 NODE_36947_length_579_cov_1.446691_g29748_i0reverse_frame_2 - 7.4e-06 25.8 0.9 6.8e-05 22.7 0.0 2.3 2 1 0 2 2 2 1 MCM OB domain Herpes_UL73 PF03554.13 NODE_36941_length_579_cov_3.898897_g29742_i0reverse_frame_3 - 0.18 11.9 1.2 4 7.5 0.0 2.3 2 0 0 2 2 2 0 UL73 viral envelope glycoprotein Inhibitor_I10 PF12559.8 NODE_36941_length_579_cov_3.898897_g29742_i0reverse_frame_2 - 0.043 14.1 0.9 0.08 13.2 0.9 1.4 1 0 0 1 1 1 0 Serine endopeptidase inhibitors Linocin_M18 PF04454.12 NODE_36941_length_579_cov_3.898897_g29742_i0reverse_frame_2 - 0.13 11.5 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Encapsulating protein for peroxidase NtCtMGAM_N PF16863.5 NODE_36939_length_579_cov_42.944853_g29741_i0reverse_frame_3 - 0.074 13.2 0.7 0.14 12.4 0.5 1.6 1 1 0 1 1 1 0 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase PH PF00169.29 NODE_36932_length_579_cov_92.277574_g29734_i0reverse_frame_3 - 2.2e-12 47.4 0.1 3.4e-12 46.8 0.1 1.3 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 NODE_36932_length_579_cov_92.277574_g29734_i0reverse_frame_3 - 7.5e-08 32.5 0.4 1.2e-07 31.9 0.4 1.3 1 0 0 1 1 1 1 Pleckstrin homology domain Atg14 PF10186.9 NODE_36932_length_579_cov_92.277574_g29734_i0reverse_frame_3 - 0.012 14.8 0.1 0.015 14.4 0.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PH_11 PF15413.6 NODE_36932_length_579_cov_92.277574_g29734_i0reverse_frame_3 - 0.038 14.4 4.7 2.5 8.6 4.7 2.3 1 1 0 1 1 1 0 Pleckstrin homology domain Cbl_N2 PF02761.14 NODE_36932_length_579_cov_92.277574_g29734_i0forward_frame_2 - 0.12 13.1 0.4 0.28 11.9 0.4 1.6 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, EF hand-like domain Papilloma_E5A PF05776.12 NODE_36920_length_579_cov_163.323529_g29722_i0reverse_frame_2 - 3.7 8.0 14.3 1.5 9.3 8.5 2.3 2 0 0 2 2 2 0 Papillomavirus E5A protein RAB3GAP2_N PF14655.6 NODE_36918_length_579_cov_172.237132_g29720_i0reverse_frame_3 - 4e-22 79.0 0.0 5.1e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 Rab3 GTPase-activating protein regulatory subunit N-terminus Shisa PF13908.6 NODE_36918_length_579_cov_172.237132_g29720_i0forward_frame_2 - 0.15 12.3 5.4 0.49 10.6 5.0 1.9 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator XRN1_D2_D3 PF18334.1 ORF98331 - 0.057 13.6 0.1 0.37 11.0 0.1 2.0 2 0 0 2 2 2 0 Exoribonuclease Xrn1 D2/D3 domain ODC_AZ PF02100.17 ORF98331 - 0.086 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme DM13 PF10517.9 ORF98331 - 0.097 13.3 0.2 0.69 10.5 0.1 2.0 2 0 0 2 2 2 0 Electron transfer DM13 MazG PF03819.17 ORF96551 - 2.1e-14 53.5 7.6 7.1e-08 32.5 0.9 3.0 4 0 0 4 4 4 2 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 ORF96551 - 0.0018 18.6 1.4 0.0033 17.8 0.1 2.2 3 0 0 3 3 3 1 Phosphoribosyl-ATP pyrophosphohydrolase Ofd1_CTDD PF10637.9 ORF96551 - 0.011 15.1 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 0 Oxoglutarate and iron-dependent oxygenase degradation C-term SecA_SW PF07516.13 ORF96551 - 0.03 14.4 1.1 0.053 13.6 1.1 1.4 1 0 0 1 1 1 0 SecA Wing and Scaffold domain SKA2 PF16740.5 ORF96551 - 0.039 13.7 0.6 2 8.2 0.3 2.3 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 MazG-like PF12643.7 ORF96551 - 0.13 12.6 0.8 0.45 10.8 0.1 2.3 3 0 0 3 3 3 0 MazG-like family Cyt_bd_oxida_I PF01654.17 ORF95617 - 9.2e-39 133.2 6.0 1e-38 133.1 6.0 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I zinc_ribbon_5 PF13719.6 ORF94523 - 0.06 13.1 0.1 0.1 12.4 0.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Metallophos PF00149.28 ORF89731 - 9.2e-06 26.3 0.0 1.4e-05 25.7 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase TetR_C_1 PF02909.17 ORF89681 - 0.014 15.2 0.0 0.022 14.6 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain SET PF00856.28 ORF89609 - 0.011 16.1 0.0 0.039 14.4 0.0 1.8 2 0 0 2 2 2 0 SET domain RICTOR_M PF14666.6 ORF89609 - 0.04 13.7 0.0 0.063 13.0 0.0 1.3 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain Peptidase_C2 PF00648.21 ORF88532 - 5.3e-20 71.6 0.1 6.3e-20 71.4 0.1 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease EF-hand_1 PF00036.32 ORF86417 - 3.7e-06 26.1 2.3 0.00025 20.4 0.1 3.1 3 0 0 3 3 3 1 EF hand EF-hand_7 PF13499.6 ORF86417 - 3.5e-05 24.2 0.3 0.00016 22.1 0.1 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF86417 - 0.0002 21.1 1.0 0.0008 19.2 0.2 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF86417 - 0.00027 20.3 1.0 0.0005 19.4 0.0 2.0 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF86417 - 0.0018 18.0 0.6 0.018 15.0 0.0 2.8 3 0 0 3 3 3 1 EF-hand domain VASt PF16016.5 ORF85116 - 0.00083 19.8 0.0 0.0014 19.1 0.0 1.4 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain DUF5103 PF17116.5 ORF8247 - 0.0021 17.4 0.8 0.0021 17.4 0.8 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF5103) PPR_2 PF13041.6 ORF81345 - 5.2e-39 132.2 8.9 1.9e-10 40.8 0.0 4.2 1 1 3 4 4 4 4 PPR repeat family PPR_3 PF13812.6 ORF81345 - 7.8e-33 112.4 0.1 9.8e-09 35.2 0.0 3.4 1 1 3 4 4 4 4 Pentatricopeptide repeat domain PPR PF01535.20 ORF81345 - 5.9e-28 95.1 2.3 2.9e-05 24.0 0.0 4.9 5 0 0 5 5 5 4 PPR repeat PPR_long PF17177.4 ORF81345 - 2.2e-11 43.6 1.4 7.8e-11 41.7 1.4 1.7 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF81345 - 1.3e-10 40.7 0.0 0.9 9.3 0.0 5.4 5 0 0 5 5 5 4 PPR repeat Peptidase_C1_2 PF03051.15 ORF81345 - 6.7e-05 21.8 3.3 7.5 5.2 0.0 4.0 1 1 3 4 4 4 4 Peptidase C1-like family Clathrin PF00637.20 ORF81345 - 0.00019 21.3 0.0 6.8 6.6 0.0 3.8 1 1 1 3 3 3 1 Region in Clathrin and VPS RNase_P_Rpp14 PF01900.19 ORF81345 - 0.00049 20.3 0.8 9.6 6.5 0.0 4.0 3 1 1 4 4 4 1 Rpp14/Pop5 family Transglycosylas PF06737.14 ORF81345 - 0.0094 16.6 5.9 61 4.4 0.1 4.2 4 0 0 4 4 4 0 Transglycosylase-like domain TPR_7 PF13176.6 ORF81345 - 0.023 14.7 0.0 2.2e+02 2.3 0.0 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat Gcn1_N PF12074.8 ORF76257 - 0.065 12.5 0.0 0.088 12.1 0.0 1.1 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Yip1 PF04893.17 ORF75551 - 0.015 15.0 0.1 0.019 14.7 0.1 1.2 1 0 0 1 1 1 0 Yip1 domain YjbF PF11102.8 ORF75019 - 5.2e-64 215.5 2.1 5.8e-64 215.3 2.1 1.0 1 0 0 1 1 1 1 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF DUF4685 PF15737.5 ORF73662 - 1.2 9.6 7.3 0.64 10.5 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4685) S1 PF00575.23 ORF727 - 3e-24 85.2 0.1 1.2e-10 41.6 0.0 2.4 2 0 0 2 2 2 2 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF727 - 3.7e-07 30.0 1.3 0.00022 21.1 0.1 2.8 3 0 0 3 3 3 2 RNase II-type exonuclease C-terminal S1 domain LGT PF01790.18 ORF69240 - 9.3e-26 90.5 0.1 1e-25 90.4 0.1 1.0 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase Got1 PF04178.12 ORF68184 - 4.4e-26 91.5 6.5 6.4e-26 91.0 6.5 1.2 1 0 0 1 1 1 1 Got1/Sft2-like family LRRC37 PF15779.5 ORF68184 - 0.2 12.0 0.0 0.33 11.3 0.0 1.2 1 0 0 1 1 1 0 Leucine-rich repeat-containing protein 37 family PH PF00169.29 ORF67085 - 6.2e-13 49.2 0.9 6.2e-13 49.2 0.9 1.5 2 0 0 2 2 2 1 PH domain PH_8 PF15409.6 ORF67085 - 0.0078 16.5 0.4 0.015 15.6 0.4 1.5 1 0 0 1 1 1 1 Pleckstrin homology domain PH_9 PF15410.6 ORF67085 - 0.13 12.7 3.1 1.1 9.7 3.1 2.3 1 1 0 1 1 1 0 Pleckstrin homology domain Ribosomal_S9 PF00380.19 ORF64134 - 7.8e-26 91.0 0.0 1e-25 90.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Oxysterol_BP PF01237.18 ORF625 - 4.4e-20 71.9 0.1 5e-20 71.7 0.1 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein A_amylase_inhib PF01356.19 ORF625 - 0.038 14.0 3.1 3.3 7.8 0.3 2.6 2 1 1 3 3 3 0 Alpha amylase inhibitor FGGY_C PF02782.16 ORF61948 - 4.8e-18 65.6 0.1 6.6e-18 65.1 0.1 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Hydantoinase_A PF01968.18 ORF61948 - 0.058 12.6 0.0 0.077 12.2 0.0 1.1 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase ISK_Channel PF02060.15 ORF60648 - 0.0027 17.4 0.0 0.0062 16.2 0.0 1.7 1 1 0 1 1 1 1 Slow voltage-gated potassium channel BatD PF13584.6 ORF60648 - 0.02 13.7 0.2 0.025 13.4 0.2 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF4448 PF14610.6 ORF60648 - 0.047 13.5 0.0 0.06 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) MCLC PF05934.11 ORF60648 - 0.1 11.3 1.0 0.14 10.9 1.0 1.1 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) TMEMspv1-c74-12 PF11044.8 ORF60648 - 0.12 12.4 0.8 0.32 11.0 0.8 1.7 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Presenilin PF01080.17 ORF60648 - 0.19 10.5 1.0 0.21 10.3 1.0 1.3 1 0 0 1 1 1 0 Presenilin OAD_gamma PF04277.13 ORF60648 - 0.33 11.6 2.8 7.6 7.2 0.0 3.0 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain LapA_dom PF06305.11 ORF60648 - 0.46 10.3 0.1 0.46 10.3 0.1 2.5 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain ERM PF00769.19 ORF60037 - 0.49 10.2 12.9 0.72 9.6 12.9 1.3 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Esterase PF00756.20 ORF59699 - 4.7e-40 137.8 0.0 5.3e-40 137.6 0.0 1.0 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF59699 - 0.00013 21.6 0.0 0.00018 21.1 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 ORF59699 - 0.011 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase Esterase_phd PF10503.9 ORF59699 - 0.16 11.5 0.0 0.26 10.7 0.0 1.4 2 0 0 2 2 2 0 Esterase PHB depolymerase DUF493 PF04359.14 ORF58175 - 0.00038 21.0 0.0 0.00063 20.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF493) TTL PF03133.15 ORF56420 - 4.7e-18 65.3 2.6 6.4e-18 64.9 2.6 1.3 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF56420 - 8.7e-07 28.4 0.1 1.3e-06 27.9 0.1 1.3 1 1 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF56420 - 4.1e-05 23.0 0.1 5.3e-05 22.6 0.1 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp RimK PF08443.11 ORF56420 - 0.0048 16.5 0.1 0.015 14.9 0.0 1.7 2 0 0 2 2 2 1 RimK-like ATP-grasp domain PEMT PF04191.13 ORF55930 - 2.1e-10 41.0 0.0 3.5e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 ORF55930 - 2.4e-05 24.7 0.0 3.8e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family NnrU PF07298.11 ORF55930 - 0.00057 19.5 0.0 0.00067 19.2 0.0 1.1 1 0 0 1 1 1 1 NnrU protein DUF1295 PF06966.12 ORF55930 - 0.0035 16.9 0.0 0.0066 16.0 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) DUF4337 PF14235.6 ORF55930 - 0.12 12.5 1.0 0.13 12.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) DUF2475 PF10629.9 ORF55313 - 5.2e-06 26.6 0.1 0.045 14.0 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF2475) Pax2_C PF12403.8 ORF55313 - 0.0019 18.3 2.6 0.043 13.9 1.3 2.4 2 1 0 2 2 2 2 Paired-box protein 2 C terminal XRN1_D2_D3 PF18334.1 ORF54985 - 0.057 13.6 0.1 0.37 11.0 0.1 2.0 2 0 0 2 2 2 0 Exoribonuclease Xrn1 D2/D3 domain ODC_AZ PF02100.17 ORF54985 - 0.086 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme DM13 PF10517.9 ORF54985 - 0.097 13.3 0.2 0.69 10.5 0.1 2.0 2 0 0 2 2 2 0 Electron transfer DM13 FlhC PF05280.11 ORF54922 - 4.1e-82 274.1 0.1 4.7e-82 273.9 0.1 1.0 1 0 0 1 1 1 1 Flagellar transcriptional activator (FlhC) Acetyltransf_1 PF00583.25 ORF52947 - 1.1e-07 32.1 0.1 1.9e-07 31.3 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF52947 - 8.1e-06 25.8 0.0 1.1e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF52947 - 3.8e-05 24.0 0.0 7.4e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF52947 - 0.001 19.0 0.0 0.0023 17.8 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF52947 - 0.016 15.3 0.0 0.032 14.3 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF52947 - 0.018 15.1 0.0 0.036 14.2 0.0 1.5 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_13 PF13880.6 ORF52947 - 0.034 14.1 0.1 0.059 13.3 0.1 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase PanZ PF12568.8 ORF52947 - 0.073 12.8 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ UvrA_DNA-bind PF17755.1 ORF46185 - 0.016 15.5 0.4 0.027 14.8 0.4 1.4 1 0 0 1 1 1 0 UvrA DNA-binding domain HALZ PF02183.18 ORF46185 - 0.31 11.3 2.0 1.4 9.2 0.6 2.4 2 0 0 2 2 2 0 Homeobox associated leucine zipper Csm1_N PF18504.1 ORF46185 - 0.35 11.2 9.1 0.38 11.1 1.2 2.9 1 1 1 2 2 2 0 Csm1 N-terminal domain bZIP_1 PF00170.21 ORF46185 - 0.47 10.6 6.9 0.17 12.0 1.9 2.7 1 1 0 2 2 2 0 bZIP transcription factor LMBR1 PF04791.16 ORF46185 - 1.6 7.5 8.7 1.8 7.4 8.7 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2680 PF10925.8 ORF46185 - 9.6 6.3 10.1 9.4 6.3 0.5 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) Urocanase_N PF17391.2 ORF45005 - 0.0058 16.3 0.4 42 3.8 0.0 3.7 1 1 3 4 4 4 3 Urocanase N-terminal domain DUF1917 PF08939.10 ORF45005 - 0.97 9.3 3.5 20 5.0 0.1 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF1917) CbiK PF06180.11 ORF44891 - 0.0094 15.3 0.2 0.043 13.1 0.1 1.8 2 0 0 2 2 2 1 Cobalt chelatase (CbiK) NAD_binding_6 PF08030.12 ORF44891 - 0.057 13.5 0.1 0.078 13.1 0.1 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain ERM PF00769.19 ORF44855 - 0.49 10.2 12.9 0.72 9.6 12.9 1.3 1 0 0 1 1 1 0 Ezrin/radixin/moesin family TTL PF03133.15 ORF44620 - 4.7e-18 65.3 2.6 6.4e-18 64.9 2.6 1.3 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF44620 - 8.7e-07 28.4 0.1 1.3e-06 27.9 0.1 1.3 1 1 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF44620 - 4.1e-05 23.0 0.1 5.3e-05 22.6 0.1 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp RimK PF08443.11 ORF44620 - 0.0048 16.5 0.1 0.015 14.9 0.0 1.7 2 0 0 2 2 2 1 RimK-like ATP-grasp domain EMP24_GP25L PF01105.24 ORF44373 - 0.00023 21.2 0.1 0.00084 19.3 0.1 1.9 1 1 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Baculo_PEP_C PF04513.12 ORF44373 - 0.00062 19.8 0.1 0.0025 17.8 0.0 1.7 1 1 1 2 2 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4854 PF16146.5 ORF44373 - 0.0015 18.8 0.3 0.022 15.1 0.2 2.1 1 1 0 2 2 2 1 Domain of unknown function (DUF4854) Seryl_tRNA_N PF02403.22 ORF44373 - 0.0037 17.5 1.5 0.0037 17.5 1.5 2.3 1 1 1 2 2 2 1 Seryl-tRNA synthetase N-terminal domain NPV_P10 PF05531.12 ORF44373 - 0.0046 17.4 0.2 0.039 14.4 0.2 2.3 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein Allexi_40kDa PF05549.11 ORF44373 - 0.011 15.2 1.0 0.015 14.8 0.6 1.5 1 1 0 1 1 1 0 Allexivirus 40kDa protein SF-assemblin PF06705.11 ORF44373 - 0.016 14.5 1.8 0.022 14.1 1.8 1.2 1 0 0 1 1 1 0 SF-assemblin/beta giardin Cortex-I_coil PF09304.10 ORF44373 - 0.028 14.6 3.5 0.043 14.0 2.2 1.9 1 1 0 1 1 1 0 Cortexillin I, coiled coil DUF1664 PF07889.12 ORF44373 - 0.035 14.2 2.0 0.06 13.4 1.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) FUSC PF04632.12 ORF44373 - 0.062 11.8 0.3 0.07 11.7 0.3 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Fzo_mitofusin PF04799.13 ORF44373 - 0.072 12.6 2.8 0.16 11.5 1.4 2.1 2 1 1 3 3 3 0 fzo-like conserved region Spc7 PF08317.11 ORF44373 - 0.094 11.6 2.9 0.14 11.0 2.5 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein YojJ PF10372.9 ORF44373 - 0.098 12.8 1.0 1.6 8.9 0.1 2.7 2 2 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus YkyA PF10368.9 ORF44373 - 0.12 12.1 3.8 0.21 11.2 3.8 1.5 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein WXG100 PF06013.12 ORF44373 - 0.14 12.4 2.6 0.56 10.5 1.3 2.5 1 1 1 2 2 2 0 Proteins of 100 residues with WXG ABC_tran_CTD PF16326.5 ORF44373 - 0.22 11.8 2.3 0.65 10.3 1.1 2.2 1 1 1 2 2 2 0 ABC transporter C-terminal domain TMPIT PF07851.13 ORF44373 - 0.31 10.2 4.3 0.29 10.3 1.7 1.9 1 1 1 2 2 2 0 TMPIT-like protein SlyX PF04102.12 ORF44373 - 0.31 11.7 2.0 9 7.0 0.2 2.9 2 1 1 3 3 3 0 SlyX CLZ PF16526.5 ORF44373 - 1.3 9.4 4.3 24 5.4 0.1 3.0 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels VHP PF02209.19 ORF43863 - 1.4e-15 57.1 2.8 2.7e-15 56.1 2.8 1.5 1 0 0 1 1 1 1 Villin headpiece domain eIF2A PF08662.11 ORF43640 - 0.0003 20.8 2.5 0.002 18.1 0.8 2.6 2 1 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A DUF3671 PF12420.8 ORF41705 - 0.14 12.2 4.6 0.39 10.8 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function TRAM_LAG1_CLN8 PF03798.16 ORF41705 - 0.91 9.2 8.0 1.4 8.7 8.0 1.2 1 0 0 1 1 1 0 TLC domain TEA PF01285.18 ORF4147 - 0.066 13.3 0.9 0.066 13.3 0.9 2.5 1 1 2 3 3 3 0 TEA/ATTS domain HlyD_3 PF13437.6 ORF41121 - 1.4e-10 41.8 0.1 8.5e-10 39.3 0.1 2.0 1 1 1 2 2 2 1 HlyD family secretion protein HlyD_D23 PF16576.5 ORF41121 - 2.9e-10 39.7 0.5 2.9e-09 36.4 0.1 2.1 2 0 0 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 ORF41121 - 1.5e-08 34.4 0.3 1.9e-08 34.1 0.3 1.3 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS ChapFlgA PF13144.6 ORF41121 - 0.059 13.4 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Chaperone for flagella basal body P-ring formation Ank_4 PF13637.6 ORF39385 - 6.1e-12 45.8 0.4 3.2e-06 27.6 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF39385 - 1.5e-09 37.9 0.0 3.4e-09 36.8 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF39385 - 9e-09 35.8 0.1 1.8e-08 34.9 0.1 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF39385 - 1.6e-07 31.0 0.0 1e-06 28.6 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 ORF39385 - 7.4e-07 29.3 0.0 3.2e-06 27.3 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Telomere_res PF16684.5 ORF39385 - 0.013 15.0 1.8 0.021 14.3 1.8 1.3 1 0 0 1 1 1 0 Telomere resolvase NanE PF04131.14 ORF39163 - 7.4e-92 305.8 0.3 8.3e-92 305.6 0.3 1.0 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.21 ORF39163 - 0.0022 17.2 0.0 0.064 12.4 0.0 2.1 1 1 1 2 2 2 1 Indole-3-glycerol phosphate synthase IMPDH PF00478.25 ORF39163 - 0.0069 15.4 0.1 0.77 8.7 0.0 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain ThiG PF05690.14 ORF39163 - 0.024 13.9 0.3 0.18 11.1 0.2 2.1 1 1 1 2 2 2 0 Thiazole biosynthesis protein ThiG Pantoate_transf PF02548.15 ORF39163 - 0.54 9.6 2.6 1.3 8.3 1.4 2.1 1 1 1 2 2 2 0 Ketopantoate hydroxymethyltransferase Paf1 PF03985.13 ORF38373 - 0.089 11.8 23.6 0.14 11.1 23.6 1.3 1 0 0 1 1 1 0 Paf1 Exonuc_VII_L PF02601.15 ORF38373 - 5 6.6 16.4 6.2 6.3 16.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit SOBP PF15279.6 ORF38373 - 5.2 7.6 13.5 6.4 7.3 13.5 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein CX9C PF16860.5 ORF38000 - 0.14 12.2 0.2 0.27 11.3 0.2 1.5 1 0 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, HGD-D PF06050.13 ORF37537 - 0.17 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component Actin_micro PF17003.5 ORF36675 - 0.04 13.1 1.0 0.051 12.8 1.0 1.1 1 0 0 1 1 1 0 Putative actin-like family Gln-synt_C PF00120.24 ORF34202 - 2.6e-58 197.7 0.0 2.9e-58 197.5 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Mur_ligase_C PF02875.21 ORF33752 - 2.6e-27 94.9 0.0 2.3e-26 91.9 0.0 2.0 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain RuvA_C PF07499.13 ORF33752 - 0.1 13.1 0.9 0.26 11.8 0.9 1.8 1 1 0 1 1 1 0 RuvA, C-terminal domain Na_Ca_ex PF01699.24 ORF31725 - 1.9e-20 73.4 15.2 1.9e-20 73.4 15.2 1.4 2 0 0 2 2 2 1 Sodium/calcium exchanger protein Actin PF00022.19 ORF30519 - 5.8e-09 35.0 0.0 0.00024 19.8 0.0 2.2 2 0 0 2 2 2 2 Actin HABP4_PAI-RBP1 PF04774.15 ORF30446 - 0.12 13.3 2.4 0.18 12.6 2.4 1.3 1 0 0 1 1 1 0 Hyaluronan / mRNA binding family Pkinase PF00069.25 ORF30303 - 0.0069 15.8 0.0 0.01 15.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain PX PF00787.24 ORF29264 - 6e-10 39.1 0.0 9.1e-10 38.5 0.0 1.3 1 0 0 1 1 1 1 PX domain E2F_TDP PF02319.20 ORF29218 - 1.3e-15 57.2 0.3 2.9e-15 56.0 0.3 1.6 1 0 0 1 1 1 1 E2F/DP family winged-helix DNA-binding domain LSM PF01423.22 ORF291 - 3.2e-17 62.0 0.1 4e-17 61.7 0.1 1.1 1 0 0 1 1 1 1 LSM domain Pkinase PF00069.25 ORF28052 - 3.5e-51 174.1 1.0 3.9e-51 174.0 1.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF28052 - 2.3e-50 171.3 0.2 2.7e-50 171.1 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF28052 - 7.2e-05 21.7 0.0 0.0001 21.2 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF28052 - 0.00014 21.0 0.4 0.00016 20.7 0.4 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF28052 - 0.00048 19.5 0.5 0.00063 19.1 0.5 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF28052 - 0.00072 19.2 2.2 0.00095 18.8 2.2 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase RIO1 PF01163.22 ORF28052 - 0.0015 18.1 0.7 0.0019 17.8 0.7 1.2 1 0 0 1 1 1 1 RIO1 family Kinase-like PF14531.6 ORF28052 - 0.028 13.7 0.0 0.03 13.6 0.0 1.1 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF28052 - 0.041 13.8 0.0 0.061 13.2 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family CX9C PF16860.5 ORF27953 - 0.14 12.2 0.2 0.27 11.3 0.2 1.5 1 0 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Ribosomal_S7e PF01251.18 ORF27731 - 2.8e-69 232.6 3.1 3.2e-69 232.4 3.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S7e Actin PF00022.19 ORF27709 - 5.8e-09 35.0 0.0 0.00024 19.8 0.0 2.2 2 0 0 2 2 2 2 Actin Pkinase PF00069.25 ORF26609 - 1.7e-05 24.3 0.9 2e-05 24.1 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain Peptidase_C71 PF12386.8 ORF26195 - 0.16 11.6 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei CBAH PF02275.18 ORF24797 - 2.2e-20 73.5 0.0 2.6e-20 73.3 0.0 1.0 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family N2227 PF07942.12 ORF23918 - 1.2e-36 126.3 0.0 1.6e-36 125.9 0.0 1.1 1 0 0 1 1 1 1 N2227-like protein DUF4912 PF16258.5 ORF23918 - 0.018 15.2 0.0 0.029 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4912) Ribosomal_S7e PF01251.18 ORF18498 - 2.8e-69 232.6 3.1 3.2e-69 232.4 3.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S7e Pkinase PF00069.25 ORF17453 - 1.4e-40 139.3 0.0 1.7e-40 139.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF17453 - 1e-16 61.0 0.0 1.4e-16 60.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF17453 - 2.7e-05 23.6 0.0 3.7e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Kinase-like EamA PF00892.20 ORF16934 - 2e-13 50.7 22.2 1.3e-06 28.6 10.6 2.1 2 0 0 2 2 2 2 EamA-like transporter family EF-hand_7 PF13499.6 ORF16451 - 0.12 12.8 0.2 0.35 11.4 0.0 1.8 2 1 0 2 2 2 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF16451 - 0.15 12.1 0.5 0.92 9.6 0.1 2.5 3 1 0 3 3 3 0 EF-hand domain Tup_N PF08581.10 ORF12584 - 0.019 15.3 0.1 0.035 14.4 0.1 1.4 1 0 0 1 1 1 0 Tup N-terminal Flg_hook PF02120.16 ORF12584 - 0.024 14.5 0.1 0.044 13.7 0.1 1.4 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK Cep57_MT_bd PF06657.13 ORF12584 - 0.031 14.7 1.3 0.05 14.1 1.3 1.3 1 0 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 DUF1192 PF06698.11 ORF12584 - 0.059 13.4 1.1 0.13 12.3 1.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1192) EamA PF00892.20 ORF11526 - 2e-13 50.7 22.2 1.3e-06 28.6 10.6 2.1 2 0 0 2 2 2 2 EamA-like transporter family Pkinase PF00069.25 ORF112499 - 1.7e-05 24.3 0.9 2e-05 24.1 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain AAA_33 PF13671.6 ORF11161 - 5.4e-06 26.6 0.0 1.6e-05 25.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain NIF PF03031.18 ORF11144 - 1.6e-22 79.9 0.5 3.4e-22 78.9 0.5 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase HAD PF12710.7 ORF11144 - 0.11 12.9 0.1 0.18 12.2 0.1 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase zf-DBF PF07535.12 ORF109538 - 0.0015 18.6 3.1 0.0015 18.6 3.1 1.9 2 0 0 2 2 2 1 DBF zinc finger ROS_MUCR PF05443.11 ORF109538 - 0.027 14.5 0.1 0.042 13.9 0.1 1.4 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein zf-C2H2_2 PF12756.7 ORF109538 - 0.032 14.6 1.9 0.065 13.6 1.9 1.6 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Epsilon_antitox PF08998.11 ORF109538 - 0.053 13.8 0.1 0.11 12.8 0.1 1.5 1 0 0 1 1 1 0 Bacterial epsilon antitoxin Endonuclease_5 PF04493.14 ORF109250 - 0.016 14.9 0.0 0.02 14.6 0.0 1.1 1 0 0 1 1 1 0 Endonuclease V Glyco_trans_2_3 PF13632.6 ORF109250 - 0.017 15.0 1.5 0.019 14.9 1.5 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 DUF2207 PF09972.9 ORF109250 - 0.052 12.3 4.6 0.065 12.0 4.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1676 PF07898.13 ORF109250 - 2.2 8.3 5.4 2.6 8.1 5.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) Phage_holin_3_6 PF07332.11 ORF109250 - 3.2 7.8 17.1 5.8 7.0 17.1 1.4 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III TrbE PF11100.8 ORF105301 - 0.055 13.7 0.3 0.055 13.7 0.3 2.1 2 0 0 2 2 2 0 Conjugal transfer protein TrbE Pox_A14 PF05767.12 ORF105301 - 1.2 9.3 4.8 1.3 9.2 0.5 2.5 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 EF-hand_8 PF13833.6 ORF10163 - 0.093 12.6 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain pair DUF4378 PF14309.6 ORF10086 - 0.00012 22.5 0.1 0.00014 22.3 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4378) Adenylsucc_synt PF00709.21 ORF100616 - 4.7e-51 174.0 0.0 5.1e-51 173.9 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase MOSC PF03473.17 ORF100507 - 4.1e-20 72.1 0.0 6.2e-20 71.6 0.0 1.2 1 0 0 1 1 1 1 MOSC domain 3-alpha PF03475.14 ORF100507 - 9.8e-15 54.2 0.1 2.3e-14 53.0 0.1 1.7 1 0 0 1 1 1 1 3-alpha domain Fumarate_red_C PF02300.17 ORF100309 - 0.052 13.6 0.4 0.14 12.2 0.1 1.8 2 0 0 2 2 2 0 Fumarate reductase subunit C Glyco_transf_4 PF13439.6 NODE_37342_length_571_cov_2.518657_g30107_i0forward_frame_1 - 0.0021 18.1 0.0 0.0035 17.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 NODE_37342_length_571_cov_2.518657_g30107_i0forward_frame_1 - 0.012 16.1 0.0 0.02 15.3 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain DUF3878 PF12994.7 NODE_37341_length_571_cov_2.738806_g30106_i0reverse_frame_1 - 0.055 12.9 0.1 0.064 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function, E. rectale Gene description (DUF3878) Mem_trans PF03547.18 NODE_37341_length_571_cov_2.738806_g30106_i0reverse_frame_1 - 0.17 10.2 0.6 0.22 9.9 0.6 1.1 1 0 0 1 1 1 0 Membrane transport protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks106.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks106.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks106.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks106.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Prion_bPrPp PF11587.8 NODE_37335_length_571_cov_46.740672_g30100_i0forward_frame_1 - 0.26 11.2 2.0 0.86 9.5 2.0 1.9 1 0 0 1 1 1 0 Major prion protein bPrPp - N terminal Isy1 PF06246.12 NODE_37308_length_571_cov_187.651119_g16335_i1forward_frame_1 - 2.5e-17 63.3 9.6 3.2e-17 62.9 9.6 1.1 1 0 0 1 1 1 1 Isy1-like splicing family COX16 PF14138.6 NODE_37308_length_571_cov_187.651119_g16335_i1forward_frame_1 - 0.69 10.5 5.8 2.6 8.6 5.6 2.2 1 1 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 E1_dh PF00676.20 NODE_37283_length_572_cov_4.156425_g30052_i0reverse_frame_1 - 3.1e-41 141.3 0.0 3.4e-41 141.1 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component RCC1_2 PF13540.6 NODE_37276_length_572_cov_87.059590_g30045_i0reverse_frame_1 - 1.4e-07 31.1 8.7 0.72 9.7 0.3 4.6 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 NODE_37276_length_572_cov_87.059590_g30045_i0reverse_frame_1 - 0.34 9.4 0.8 23 3.3 0.0 2.8 3 1 1 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase IBR PF01485.21 NODE_37273_length_572_cov_89.655493_g30042_i0reverse_frame_1 - 1.2e-05 25.4 5.8 3.6e-05 23.9 5.8 1.8 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain FeoB_associated PF12669.7 NODE_37273_length_572_cov_89.655493_g30042_i0reverse_frame_1 - 5 7.6 0.0 5 7.6 0.0 3.8 4 1 0 4 4 4 0 FeoB-associated Cys-rich membrane protein RCC1_2 PF13540.6 NODE_37263_length_572_cov_157.746741_g30032_i0forward_frame_1 - 7.5e-06 25.6 1.9 0.0043 16.8 0.1 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat bPH_2 PF03703.14 NODE_37250_length_572_cov_540.657356_g30020_i0forward_frame_1 - 0.091 13.0 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial PH domain DUF3206 PF11472.8 NODE_37244_length_573_cov_2.111524_g30015_i0reverse_frame_1 - 0.026 14.5 0.1 0.066 13.2 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3206) AAA_22 PF13401.6 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 2.7e-08 34.2 0.1 5.5e-08 33.2 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.00022 21.7 0.2 0.00073 19.9 0.2 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.0003 20.4 0.1 0.0004 20.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain PIF1 PF05970.14 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.0011 18.2 0.0 0.0017 17.6 0.0 1.2 1 0 0 1 1 1 1 PIF1-like helicase NACHT PF05729.12 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.0016 18.4 0.1 0.0044 17.0 0.0 1.7 2 0 0 2 2 2 1 NACHT domain AAA_5 PF07728.14 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.014 15.4 0.0 0.065 13.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Ploopntkinase3 PF18751.1 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.015 15.2 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 PhoH PF02562.16 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.018 14.5 0.0 0.046 13.2 0.0 1.6 2 0 0 2 2 2 0 PhoH-like protein NB-ARC PF00931.22 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.028 13.6 0.0 0.035 13.3 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain IstB_IS21 PF01695.17 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.049 13.4 0.0 0.11 12.2 0.0 1.6 2 0 0 2 2 2 0 IstB-like ATP binding protein Roc PF08477.13 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.054 13.7 0.1 0.11 12.7 0.1 1.5 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_30 PF13604.6 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.095 12.4 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.11 12.0 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA PF00004.29 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.13 12.6 0.0 0.32 11.4 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Sigma54_activ_2 PF14532.6 NODE_37239_length_573_cov_2.786245_g30010_i0forward_frame_1 - 0.15 12.1 0.0 0.58 10.3 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain DUF1391 PF07151.12 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_1 - 4.9e-18 64.7 0.3 7.9e-18 64.0 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1391) DUF1327 PF07041.11 NODE_37236_length_573_cov_3.068773_g30007_i0forward_frame_1 - 2.1e-15 56.8 0.1 2.8e-15 56.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1327) ECSCR PF15820.5 NODE_37234_length_573_cov_3.176580_g30005_i0forward_frame_1 - 0.15 11.9 0.1 1 9.2 0.0 2.0 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator RCC1_2 PF13540.6 NODE_37226_length_573_cov_78.737918_g29998_i0reverse_frame_1 - 6.8e-07 28.9 7.4 0.19 11.6 0.1 3.7 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat ubiquitin PF00240.23 NODE_37226_length_573_cov_78.737918_g29998_i0reverse_frame_1 - 0.0055 16.4 0.0 0.0093 15.7 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family PH_TFIIH PF08567.11 NODE_37226_length_573_cov_78.737918_g29998_i0reverse_frame_1 - 0.03 14.6 0.1 5.8 7.3 0.0 2.5 2 1 0 2 2 2 0 TFIIH p62 subunit, N-terminal domain Rad60-SLD_2 PF13881.6 NODE_37226_length_573_cov_78.737918_g29998_i0reverse_frame_1 - 0.035 14.2 0.1 0.063 13.4 0.1 1.5 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like XRCC1_N PF01834.16 NODE_37226_length_573_cov_78.737918_g29998_i0reverse_frame_1 - 0.17 11.9 0.1 7.1 6.6 0.0 2.1 1 1 1 2 2 2 0 XRCC1 N terminal domain PheRS_DBD2 PF18554.1 NODE_37226_length_573_cov_78.737918_g29998_i0reverse_frame_1 - 0.55 10.3 9.3 7.2 6.7 0.6 3.4 3 0 0 3 3 3 0 PheRS DNA binding domain 2 COX14 PF14880.6 NODE_37226_length_573_cov_78.737918_g29998_i0forward_frame_1 - 0.15 11.9 4.2 5 7.0 0.8 2.6 2 0 0 2 2 2 0 Cytochrome oxidase c assembly CENP-F_leu_zip PF10473.9 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.0003 20.8 30.3 0.0091 16.0 20.7 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3584 PF12128.8 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.00092 16.9 25.3 0.0042 14.7 11.7 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3584) KASH_CCD PF14662.6 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.002 18.0 11.7 0.002 18.0 11.7 2.4 1 1 1 2 2 2 1 Coiled-coil region of CCDC155 or KASH TMF_DNA_bd PF12329.8 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.0063 16.5 5.1 0.0063 16.5 5.1 4.3 1 1 2 3 3 2 1 TATA element modulatory factor 1 DNA binding GAS PF13851.6 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.019 14.3 26.7 0.036 13.4 26.6 1.5 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding HR1 PF02185.16 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.022 14.9 1.0 0.022 14.9 1.0 4.1 2 1 2 4 4 4 0 Hr1 repeat Filament PF00038.21 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.025 14.2 22.4 0.56 9.7 5.5 2.3 1 1 1 2 2 2 0 Intermediate filament protein CLZ PF16526.5 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.035 14.5 2.3 0.035 14.5 2.3 3.3 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels WEMBL PF05701.11 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.038 12.7 26.8 0.12 11.0 26.8 1.7 1 1 0 1 1 1 0 Weak chloroplast movement under blue light Atg14 PF10186.9 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.039 13.0 28.2 0.59 9.2 10.3 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fez1 PF06818.15 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.052 14.0 24.4 0.16 12.4 22.2 2.2 1 1 1 2 2 2 0 Fez1 UPF0242 PF06785.11 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.061 13.4 30.5 0.055 13.6 14.1 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Spc7 PF08317.11 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.065 12.1 27.8 0.11 11.3 25.8 2.0 1 1 0 1 1 1 0 Spc7 kinetochore protein Cep57_CLD PF14073.6 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.065 13.3 21.2 0.1 12.6 21.2 1.3 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 ADIP PF11559.8 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.066 13.3 27.5 0.11 12.5 8.8 2.8 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DUF641 PF04859.12 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.072 13.4 21.1 0.3 11.4 1.8 3.3 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) DUF4618 PF15397.6 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.086 12.2 27.4 0.16 11.3 27.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) TolA_bind_tri PF16331.5 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.087 12.9 0.5 0.087 12.9 0.5 3.5 3 1 0 3 3 3 0 TolA binding protein trimerisation SlyX PF04102.12 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.15 12.7 0.1 0.15 12.7 0.1 3.7 2 2 2 4 4 4 0 SlyX Fib_alpha PF08702.10 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.16 12.2 26.6 2.1 8.5 15.5 2.7 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.3 11.1 21.6 0.28 11.2 8.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) HIP1_clath_bdg PF16515.5 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.38 11.4 28.2 1.5 9.5 3.6 3.5 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Alanine_zipper PF11839.8 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.4 11.1 3.9 4.2 7.8 0.1 3.2 3 1 0 3 3 3 0 Alanine-zipper, major outer membrane lipoprotein Exonuc_VII_L PF02601.15 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.41 10.2 19.3 4.2 6.9 19.3 1.9 1 1 0 1 1 1 0 Exonuclease VII, large subunit Sec2p PF06428.11 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.42 10.6 24.8 0.41 10.6 1.3 3.4 1 1 2 3 3 3 0 GDP/GTP exchange factor Sec2p APG6_N PF17675.1 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.52 10.8 25.4 0.2 12.2 17.4 2.3 1 1 1 2 2 2 0 Apg6 coiled-coil region Lebercilin PF15619.6 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.58 9.8 26.7 0.71 9.5 20.2 2.8 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease IFT57 PF10498.9 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.62 9.0 25.7 1.9 7.4 25.7 1.7 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 DUF5082 PF16888.5 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.76 10.1 25.7 0.46 10.8 14.1 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) LPP PF04728.13 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.77 10.2 19.2 2.6 8.5 1.9 4.0 3 1 0 3 3 3 0 Lipoprotein leucine-zipper DUF812 PF05667.11 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.81 8.5 28.8 6.7 5.5 28.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF812) FlaC_arch PF05377.11 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.83 10.1 22.6 0.46 10.9 2.8 4.2 2 2 3 5 5 5 0 Flagella accessory protein C (FlaC) ATG16 PF08614.11 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 0.86 9.8 24.5 0.79 9.9 16.5 2.4 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF3552 PF12072.8 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 1.1 8.6 22.8 1.3 8.4 19.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) TraF_2 PF13729.6 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 1.2 8.5 10.8 3.5 6.9 1.3 2.9 2 1 1 3 3 3 0 F plasmid transfer operon, TraF, protein Syntaxin-6_N PF09177.11 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 1.4 9.5 20.4 0.48 11.0 5.2 2.9 1 1 2 3 3 3 0 Syntaxin 6, N-terminal DUF3450 PF11932.8 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 1.4 8.1 22.4 2.4 7.4 8.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Cep57_CLD_2 PF14197.6 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 1.6 8.8 18.7 8.9 6.5 5.2 4.6 2 2 1 3 3 3 0 Centrosome localisation domain of PPC89 Baculo_PEP_C PF04513.12 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 2.2 8.3 18.4 2.6 8.1 8.4 2.4 1 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4407 PF14362.6 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 2.3 7.5 16.8 1 8.7 10.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF724 PF05266.14 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 2.8 7.7 26.3 2.1 8.1 3.5 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF724) HSBP1 PF06825.12 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 3.5 7.6 15.0 1.5 8.7 0.5 3.8 3 2 1 4 4 4 0 Heat shock factor binding protein 1 DivIC PF04977.15 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 4.4 7.2 22.6 0.63 9.9 4.1 4.3 1 1 2 3 3 3 0 Septum formation initiator Phage_int_SAM_6 PF18644.1 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 4.4 7.3 9.9 0.36 10.9 1.2 2.8 1 1 2 3 3 3 0 Phage integrase SAM-like domain BST2 PF16716.5 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 5 7.8 27.4 17 6.1 9.5 3.4 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 BRE1 PF08647.11 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 5.1 7.2 32.1 2.8 8.1 13.7 3.5 1 1 3 4 4 4 0 BRE1 E3 ubiquitin ligase Ax_dynein_light PF10211.9 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 7 6.5 21.9 5.5 6.9 10.1 2.4 1 1 1 2 2 2 0 Axonemal dynein light chain CENP-H PF05837.12 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 8 6.9 23.7 0.49 10.8 10.7 2.4 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Cob_adeno_trans PF01923.18 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 8.2 6.5 11.9 4.1 7.5 2.0 2.1 1 1 1 2 2 2 0 Cobalamin adenosyltransferase LMBR1 PF04791.16 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 8.2 5.2 17.5 10 4.9 17.5 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein GrpE PF01025.19 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 9 5.9 22.0 3.7 7.2 5.4 2.8 1 1 1 2 2 2 0 GrpE DUF2203 PF09969.9 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 9.5 7.0 14.4 10 6.9 3.3 2.6 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) LRAT PF04970.13 NODE_37216_length_573_cov_123.390335_g29988_i0forward_frame_1 - 9.9 6.5 9.2 1 9.7 1.0 2.2 1 1 1 2 2 2 0 Lecithin retinol acyltransferase DUF5589 PF17672.1 NODE_37208_length_573_cov_178.546468_g29981_i0reverse_frame_1 - 5.4 7.0 8.3 0.26 11.2 1.8 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5589) PHD_2 PF13831.6 NODE_37208_length_573_cov_178.546468_g29981_i0forward_frame_1 - 0.0032 17.0 1.1 0.0074 15.8 1.1 1.6 1 0 0 1 1 1 1 PHD-finger Yae1_N PF09811.9 NODE_37207_length_573_cov_181.868030_g29980_i0reverse_frame_1 - 4.5 7.1 7.1 0.22 11.3 1.2 1.9 2 1 0 2 2 2 0 Essential protein Yae1, N terminal RCC1_2 PF13540.6 NODE_37207_length_573_cov_181.868030_g29980_i0forward_frame_1 - 0.00053 19.7 3.5 0.13 12.1 0.1 3.2 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RR_TM4-6 PF06459.12 NODE_37207_length_573_cov_181.868030_g29980_i0forward_frame_1 - 0.36 10.6 9.9 0.41 10.4 9.9 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 RNA_polI_A34 PF08208.11 NODE_37207_length_573_cov_181.868030_g29980_i0forward_frame_1 - 4.4 7.3 25.7 6 6.9 25.7 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF3807 PF12720.7 NODE_37207_length_573_cov_181.868030_g29980_i0forward_frame_1 - 7.4 6.8 13.2 11 6.2 13.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) MyTH4 PF00784.17 NODE_37203_length_573_cov_194.618959_g29976_i0forward_frame_1 - 3.3 8.2 11.6 9 6.8 0.1 3.8 1 1 3 4 4 4 0 MyTH4 domain DUF2805 PF10985.8 NODE_37197_length_573_cov_397.565056_g29971_i0reverse_frame_1 - 0.044 14.2 3.0 0.098 13.0 3.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2805) HisG_C PF08029.11 NODE_37197_length_573_cov_397.565056_g29971_i0reverse_frame_1 - 0.13 12.4 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 HisG, C-terminal domain Peptidase_C1 PF00112.23 NODE_37190_length_573_cov_1684.836431_g29967_i0reverse_frame_1 - 3.6e-14 53.4 0.1 4.4e-14 53.1 0.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_37190_length_573_cov_1684.836431_g29967_i0reverse_frame_1 - 0.00043 19.2 0.1 0.001 17.9 0.0 1.5 2 0 0 2 2 2 1 Peptidase C1-like family Peptidase_C39_2 PF13529.6 NODE_37190_length_573_cov_1684.836431_g29967_i0reverse_frame_1 - 0.00087 19.9 0.0 0.0012 19.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase_C39 like family NAD_synthase PF02540.17 NODE_37186_length_574_cov_2.122449_g29965_i0forward_frame_2 - 8.2e-20 70.9 0.0 9.9e-20 70.7 0.0 1.1 1 0 0 1 1 1 1 NAD synthase SBP_bac_3 PF00497.20 NODE_37181_length_574_cov_3.055659_g29960_i0forward_frame_3 - 4.8e-06 26.2 0.0 6.1e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Inositol_P PF00459.25 NODE_37181_length_574_cov_3.055659_g29960_i0forward_frame_3 - 0.062 12.8 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Inositol monophosphatase family Phosphonate-bd PF12974.7 NODE_37181_length_574_cov_3.055659_g29960_i0forward_frame_3 - 0.12 12.0 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein FtsH_ext PF06480.15 NODE_37169_length_574_cov_60.519481_g21777_i1reverse_frame_2 - 0.11 12.9 0.9 0.14 12.5 0.5 1.4 1 1 0 1 1 1 0 FtsH Extracellular Brix PF04427.18 NODE_37155_length_574_cov_96.072356_g29936_i0reverse_frame_3 - 0.0016 18.6 0.0 0.0031 17.6 0.0 1.5 1 0 0 1 1 1 1 Brix domain Presenilin PF01080.17 NODE_37155_length_574_cov_96.072356_g29936_i0reverse_frame_3 - 8.7 5.0 5.3 9.3 4.9 5.3 1.2 1 0 0 1 1 1 0 Presenilin MORN PF02493.20 NODE_37153_length_574_cov_100.157699_g29934_i0reverse_frame_2 - 1e-12 47.2 9.9 5.9e-06 25.9 0.1 3.5 4 0 0 4 4 4 2 MORN repeat RCC1_2 PF13540.6 NODE_37143_length_574_cov_202.302412_g29926_i0forward_frame_2 - 9.5e-10 38.0 0.1 0.059 13.2 0.0 4.3 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_37143_length_574_cov_202.302412_g29926_i0forward_frame_2 - 0.013 15.6 0.3 16 5.5 0.0 3.4 3 1 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Crystall PF00030.19 NODE_37143_length_574_cov_202.302412_g29926_i0forward_frame_2 - 0.015 15.5 0.0 1.1 9.6 0.0 2.4 1 1 2 3 3 3 0 Beta/Gamma crystallin DUF359 PF04019.12 NODE_37143_length_574_cov_202.302412_g29926_i0forward_frame_2 - 0.066 12.8 0.0 33 4.1 0.0 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF359) AbiJ_NTD5 PF18865.1 NODE_37143_length_574_cov_202.302412_g29926_i0forward_frame_2 - 0.076 12.8 0.0 15 5.4 0.0 3.2 3 0 0 3 3 3 0 AbiJ N-terminal domain 5 Lipocalin_7 PF14651.6 NODE_37143_length_574_cov_202.302412_g29926_i0forward_frame_2 - 0.11 12.4 0.0 0.74 9.8 0.0 2.0 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family UL97 PF06734.12 NODE_37143_length_574_cov_202.302412_g29926_i0forward_frame_2 - 0.13 12.1 0.0 0.88 9.4 0.0 1.9 2 0 0 2 2 2 0 UL97 Choline_sulf_C PF12411.8 NODE_37143_length_574_cov_202.302412_g29926_i0forward_frame_2 - 0.68 9.8 2.2 25 4.8 0.1 3.4 4 1 0 4 4 4 0 Choline sulfatase enzyme C terminal DUF4234 PF14018.6 NODE_37141_length_574_cov_319.528757_g29924_i0reverse_frame_3 - 0.11 12.6 3.6 0.3 11.2 3.6 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4234) LEF-9 PF05094.12 NODE_37128_length_575_cov_2.401852_g29913_i0reverse_frame_2 - 0.04 12.5 0.1 0.056 12.0 0.1 1.2 1 0 0 1 1 1 0 Late expression factor 9 (LEF-9) Cullin PF00888.22 NODE_37127_length_575_cov_2.416667_g29912_i0reverse_frame_2 - 8.2e-09 34.6 7.3 9e-09 34.5 7.3 1.0 1 0 0 1 1 1 1 Cullin family DUF1759 PF03564.15 NODE_37127_length_575_cov_2.416667_g29912_i0reverse_frame_2 - 0.037 14.0 1.2 0.12 12.3 0.2 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1759) TFIIA_gamma_N PF02268.16 NODE_37127_length_575_cov_2.416667_g29912_i0reverse_frame_2 - 0.078 13.0 0.1 0.23 11.5 0.1 1.8 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit, helical domain zf-C3HC PF07967.13 NODE_37127_length_575_cov_2.416667_g29912_i0reverse_frame_2 - 0.098 12.7 0.2 1.8 8.6 0.0 2.3 1 1 0 2 2 2 0 C3HC zinc finger-like Glyco_hydro_127 PF07944.12 NODE_37125_length_575_cov_3.020370_g29910_i0forward_frame_2 - 1.3e-61 208.7 0.0 1.4e-61 208.6 0.0 1.0 1 0 0 1 1 1 1 Beta-L-arabinofuranosidase, GH127 Poly_export PF02563.16 NODE_37124_length_575_cov_3.559259_g29909_i0forward_frame_2 - 8.9e-28 96.3 0.1 1.4e-27 95.7 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis/export protein SLBB PF10531.9 NODE_37124_length_575_cov_3.559259_g29909_i0forward_frame_2 - 4.6e-08 32.8 0.0 1.5e-07 31.1 0.0 1.9 2 0 0 2 2 2 1 SLBB domain Adeno_PVIII PF01310.18 NODE_37124_length_575_cov_3.559259_g29909_i0forward_frame_2 - 0.055 13.1 0.1 0.068 12.7 0.1 1.1 1 0 0 1 1 1 0 Adenovirus hexon associated protein, protein VIII Phage_holin_T PF11031.8 NODE_37122_length_575_cov_5.074074_g29907_i0forward_frame_3 - 0.0075 15.8 1.5 0.0075 15.8 1.5 1.5 2 0 0 2 2 2 1 Bacteriophage T holin PI-PLC-Y PF00387.19 NODE_37122_length_575_cov_5.074074_g29907_i0forward_frame_3 - 3.2 8.1 11.2 0.071 13.5 2.0 2.3 2 1 0 2 2 2 0 Phosphatidylinositol-specific phospholipase C, Y domain DUF366 PF04017.12 NODE_37121_length_575_cov_6.696296_g29906_i0forward_frame_3 - 0.11 12.0 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF366) Sina PF03145.16 NODE_37120_length_575_cov_7.577778_g29007_i1forward_frame_3 - 5.6e-05 23.2 2.0 7.6e-05 22.7 2.0 1.2 1 0 0 1 1 1 1 Seven in absentia protein family zf-TRAF_2 PF15965.5 NODE_37120_length_575_cov_7.577778_g29007_i1forward_frame_3 - 0.00076 19.9 7.6 0.0027 18.1 3.6 2.4 1 1 1 2 2 2 1 TRAF-like zinc-finger zf-TRAF PF02176.18 NODE_37120_length_575_cov_7.577778_g29007_i1forward_frame_3 - 0.011 16.4 4.6 0.21 12.3 1.1 2.4 1 1 1 2 2 2 0 TRAF-type zinc finger zf-C3HC4_2 PF13923.6 NODE_37120_length_575_cov_7.577778_g29007_i1forward_frame_3 - 3 7.8 10.6 0.2 11.5 1.1 2.8 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) PNK3P PF08645.11 NODE_37115_length_575_cov_75.392593_g29901_i0reverse_frame_2 - 0.32 10.7 3.6 0.44 10.2 3.6 1.2 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase SGS PF05002.15 NODE_37107_length_575_cov_102.627778_g29893_i0reverse_frame_2 - 0.1 12.7 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 SGS domain HCV_NS1 PF01560.17 NODE_37107_length_575_cov_102.627778_g29893_i0forward_frame_2 - 0.011 14.5 2.6 0.016 13.9 2.6 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein E2/NS1 DUF4105 PF13387.6 NODE_37098_length_575_cov_223.724074_g29884_i0reverse_frame_3 - 0.14 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4105) Toxin_9 PF02819.15 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_3 - 8 6.8 28.0 6.9 7.0 2.0 4.2 4 0 0 4 4 4 0 Spider toxin Hfq PF17209.3 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 9.6e-06 25.2 0.2 21 4.9 0.0 4.7 5 0 0 5 5 5 3 Hfq protein YmgB PF10798.8 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.0068 16.2 0.3 31 4.5 0.0 3.9 4 0 0 4 4 4 0 Biofilm development protein YmgB/AriR COX14 PF14880.6 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.039 13.8 8.9 18 5.3 0.2 4.4 4 0 0 4 4 4 0 Cytochrome oxidase c assembly Transposase_20 PF02371.16 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.087 13.1 0.0 1.2e+02 3.0 0.0 3.7 4 0 0 4 4 4 0 Transposase IS116/IS110/IS902 family 4HPAD_g_N PF18671.1 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.1 12.4 1.7 1.7e+02 2.0 0.0 4.3 5 0 0 5 5 5 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal YtpI PF14007.6 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.14 12.4 1.9 75 3.6 0.0 3.4 3 0 0 3 3 3 0 YtpI-like protein Myotub-related PF06602.14 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.51 9.2 3.3 6.5 5.6 0.2 2.9 2 1 1 3 3 3 0 Myotubularin-like phosphatase domain UPRTase PF14681.6 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 6.2e-05 22.5 0.1 0.29 10.6 0.0 3.1 1 1 2 3 3 3 2 Uracil phosphoribosyltransferase Cyclin_C PF02984.19 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.00016 21.7 2.4 1.4 9.0 0.1 3.6 1 1 3 4 4 4 2 Cyclin, C-terminal domain Integrase_H2C2 PF17921.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.00093 19.3 4.0 5.6 7.2 0.0 4.0 4 0 0 4 4 4 2 Integrase zinc binding domain Ribosomal_S14 PF00253.21 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.00098 18.8 4.4 11 5.9 0.1 4.0 4 0 0 4 4 4 3 Ribosomal protein S14p/S29e FHA_2 PF17913.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.0061 16.8 0.0 8.3 6.7 0.0 2.9 2 1 1 3 3 3 2 FHA domain VEFS-Box PF09733.9 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.023 14.5 0.0 4.9 7.0 0.0 3.2 1 1 3 4 4 4 0 VEFS-Box of polycomb protein Kazal_1 PF00050.21 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.028 14.4 3.0 42 4.3 0.0 3.6 4 0 0 4 4 4 0 Kazal-type serine protease inhibitor domain VWA_N2 PF16164.5 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.1 12.7 2.6 35 4.6 0.1 3.8 3 1 1 4 4 4 0 VWA N-terminal Tom6 PF17112.5 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.85 9.2 12.2 9.6 5.8 0.1 4.2 4 0 0 4 4 4 0 Mitochondrial import receptor subunit Tom6, fungal RCC1_2 PF13540.6 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 1.7e-07 30.9 2.8 1.1 9.1 0.0 4.4 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 7.4e-06 26.4 0.0 15 6.1 0.0 4.5 5 0 0 5 5 5 0 Spectrin repeat AFP_2 PF18815.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.0004 20.6 2.2 15 5.9 0.0 4.6 2 2 3 5 5 5 0 Bacterial antifreeze protein repeat Ysc84 PF04366.12 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.00072 19.3 5.5 2 8.2 0.7 3.7 1 1 2 3 3 3 2 Las17-binding protein actin regulator DUF155 PF02582.14 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.0025 17.9 0.8 9.7 6.2 0.1 3.9 3 1 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Crystall PF00030.19 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.0033 17.6 0.9 0.78 10.0 0.1 2.6 1 1 1 3 3 3 1 Beta/Gamma crystallin Lipocalin_7 PF14651.6 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.027 14.4 1.6 0.58 10.1 0.1 2.3 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family PheRS_DBD2 PF18554.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.067 13.2 22.6 4.6 7.3 0.5 4.8 5 0 0 5 5 5 0 PheRS DNA binding domain 2 RNA_pol_Rpb1_2 PF00623.20 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.092 13.0 0.0 28 4.9 0.0 3.2 2 1 1 3 3 3 0 RNA polymerase Rpb1, domain 2 HEPN_Toprim_N PF18871.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.092 12.7 0.0 64 3.4 0.0 3.0 3 0 0 3 3 3 0 HEPN/Toprim N-terminal domain 1 Methyltransf_29 PF03141.16 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.13 10.8 0.1 13 4.2 0.0 3.3 4 0 0 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase UPF0180 PF03698.13 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.13 12.4 0.4 1.9e+02 2.3 0.0 4.0 4 0 0 4 4 4 0 Uncharacterised protein family (UPF0180) Tugs PF17840.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.24 11.6 6.5 1.2e+02 3.0 0.1 4.3 4 0 0 4 4 4 0 Tethering Ubl4a to BAGS domain Glyco_hydro_79C PF16862.5 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 4.6 8.2 8.7 31 5.5 0.4 3.3 1 1 3 4 4 4 0 Glycosyl hydrolase family 79 C-terminal beta domain Strep_SA_rep PF06696.11 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 5.8 7.0 8.4 2e+02 2.2 0.0 4.6 5 0 0 5 5 5 0 Streptococcal surface antigen repeat ABC_membrane PF00664.23 NODE_37084_length_576_cov_2.349353_g29871_i0reverse_frame_3 - 0.00065 19.4 6.7 0.0008 19.1 6.7 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region T_Ag_DNA_bind PF02217.16 NODE_37084_length_576_cov_2.349353_g29871_i0reverse_frame_3 - 0.017 15.7 0.1 0.033 14.8 0.1 1.4 1 0 0 1 1 1 0 Origin of replication binding protein Ferric_reduct PF01794.19 NODE_37084_length_576_cov_2.349353_g29871_i0reverse_frame_3 - 0.029 14.5 8.3 0.4 10.8 0.7 2.1 2 0 0 2 2 2 0 Ferric reductase like transmembrane component COX14 PF14880.6 NODE_37084_length_576_cov_2.349353_g29871_i0reverse_frame_3 - 0.056 13.3 1.8 0.1 12.5 0.1 2.2 3 0 0 3 3 3 0 Cytochrome oxidase c assembly Pilin_N PF07790.11 NODE_37084_length_576_cov_2.349353_g29871_i0reverse_frame_3 - 3.2 8.8 6.3 0.48 11.4 0.5 2.5 3 0 0 3 3 3 0 Archaeal Type IV pilin, N-terminal PapD_N PF00345.20 NODE_37083_length_576_cov_2.375231_g29870_i0reverse_frame_2 - 4.4e-29 100.9 0.0 7.5e-29 100.2 0.0 1.3 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain DUF789 PF05623.12 NODE_37082_length_576_cov_2.386322_g29869_i0forward_frame_3 - 0.075 12.7 1.7 0.098 12.3 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF789) SHIPPO-rpt PF07004.12 NODE_37076_length_576_cov_3.290203_g29863_i0forward_frame_2 - 6.5e-08 33.1 43.5 0.0013 19.5 0.8 6.5 6 1 0 6 6 6 5 Sperm-tail PG-rich repeat YtkA PF13115.6 NODE_37076_length_576_cov_3.290203_g29863_i0forward_frame_2 - 0.048 14.3 0.1 12 6.6 0.1 2.5 2 0 0 2 2 2 0 YtkA-like CDC45 PF02724.14 NODE_37075_length_576_cov_4.842884_g29862_i0forward_frame_3 - 2.2 6.5 8.3 2.6 6.2 8.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Csa1 PF06023.12 NODE_37047_length_576_cov_202.421442_g26795_i1forward_frame_3 - 0.12 11.7 0.2 0.16 11.3 0.2 1.1 1 0 0 1 1 1 0 CRISPR-associated exonuclease Csa1 Antimicrobial_2 PF08023.12 NODE_37047_length_576_cov_202.421442_g26795_i1forward_frame_3 - 0.87 10.2 9.5 1.3e+03 -0.0 9.5 3.2 1 1 0 1 1 1 0 Frog antimicrobial peptide Pkinase PF00069.25 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 8.2e-37 127.0 0.2 9.7e-37 126.8 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 1.6e-25 89.9 0.1 1.9e-25 89.6 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 0.00088 18.3 0.4 0.0011 18.0 0.4 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 0.0073 15.7 0.1 0.01 15.2 0.1 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 0.0098 15.2 0.0 0.018 14.4 0.0 1.4 2 0 0 2 2 2 1 Kinase-like L51_S25_CI-B8 PF05047.16 ORF992 - 1e-07 31.7 0.0 2e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain RICH PF05062.12 ORF99071 - 0.0092 16.3 1.9 0.026 14.9 0.4 2.4 2 0 0 2 2 2 1 RICH domain DUF4287 PF14117.6 ORF99071 - 0.1 12.7 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4287) Carb_anhydrase PF00194.21 ORF98765 - 2.5e-16 60.0 0.0 3.1e-16 59.7 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DnaT PF17948.1 ORF98765 - 0.098 12.4 0.0 0.24 11.1 0.0 1.6 2 0 0 2 2 2 0 DnaT DNA-binding domain LRR_12 PF18837.1 ORF98765 - 0.21 11.3 0.3 0.35 10.6 0.3 1.3 1 0 0 1 1 1 0 Leucine-rich repeat Ras PF00071.22 ORF98609 - 5e-37 127.0 0.0 6.1e-37 126.7 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF98609 - 1.3e-22 80.3 0.0 1.7e-22 79.9 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF98609 - 1.6e-08 34.2 0.0 1.8e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF98609 - 0.00047 20.2 0.0 0.00053 20.0 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF98609 - 0.0015 17.9 0.0 0.0017 17.7 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Dynamin_N PF00350.23 ORF98609 - 0.043 13.9 0.0 0.26 11.3 0.0 1.9 1 1 1 2 2 2 0 Dynamin family AAA_16 PF13191.6 ORF98609 - 0.13 12.7 0.1 0.16 12.3 0.1 1.3 1 1 0 1 1 1 0 AAA ATPase domain G-alpha PF00503.20 ORF98609 - 0.13 11.4 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit SsgA PF04686.12 ORF9549 - 0.046 13.7 0.0 0.11 12.5 0.0 1.6 1 1 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA DUF1974 PF09317.11 ORF9549 - 0.063 12.8 0.6 0.081 12.5 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) ATG16 PF08614.11 ORF9549 - 0.24 11.6 5.6 0.045 14.0 2.0 1.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) cNMP_binding PF00027.29 ORF91186 - 0.0051 16.9 0.0 0.0085 16.2 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Asp PF00026.23 ORF89866 - 1.5e-15 57.4 0.0 1.9e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease C2 PF00168.30 ORF89730 - 9.5e-14 51.5 0.0 1.4e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 C2 domain WWE PF02825.20 ORF89730 - 1.6e-06 28.6 0.0 4.2e-06 27.3 0.0 1.7 2 0 0 2 2 2 1 WWE domain RCC1_2 PF13540.6 ORF89300 - 3.7e-10 39.3 3.4 0.14 12.0 0.0 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF89300 - 0.00045 20.5 0.4 1.2 9.5 0.0 3.4 1 1 2 3 3 3 2 TFIIH p62 subunit, N-terminal domain DUF155 PF02582.14 ORF89300 - 0.0033 17.5 1.2 15 5.6 1.3 3.8 2 1 0 2 2 2 2 Uncharacterised ACR, YagE family COG1723 PhnH PF05845.12 ORF89300 - 0.04 13.6 0.7 0.31 10.8 0.2 2.0 1 1 1 2 2 2 0 Bacterial phosphonate metabolism protein (PhnH) Choline_sulf_C PF12411.8 ORF89300 - 1.7 8.5 4.1 26 4.7 0.2 3.4 4 0 0 4 4 4 0 Choline sulfatase enzyme C terminal Ras PF00071.22 ORF87547 - 5.7e-40 136.6 1.4 6.6e-40 136.3 1.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF87547 - 7.6e-20 71.3 0.3 1.2e-19 70.7 0.3 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF87547 - 1.8e-14 53.6 0.7 2.1e-14 53.4 0.7 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF87547 - 3.4e-09 36.8 0.4 5.1e-09 36.2 0.4 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF87547 - 8.6e-08 31.8 1.5 9.7e-08 31.6 1.5 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF87547 - 4.2e-07 29.7 3.7 6e-06 25.9 3.7 2.2 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF87547 - 1.4e-05 24.7 1.1 2.4e-05 23.9 1.1 1.4 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF87547 - 0.00049 20.0 0.9 0.013 15.4 0.2 2.3 1 1 1 2 2 2 1 RsgA GTPase ABC_tran PF00005.27 ORF87547 - 0.00073 20.1 0.2 0.0014 19.2 0.1 1.5 1 1 0 1 1 1 1 ABC transporter G-alpha PF00503.20 ORF87547 - 0.0034 16.6 0.1 0.0041 16.3 0.1 1.4 1 1 0 1 1 1 1 G-protein alpha subunit TniB PF05621.11 ORF87547 - 0.073 12.5 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein Peptidase_M14 PF00246.24 ORF87514 - 6.5e-15 55.7 0.1 7.6e-15 55.5 0.1 1.0 1 0 0 1 1 1 1 Zinc carboxypeptidase LacY_symp PF01306.19 ORF87514 - 0.032 13.0 0.0 0.039 12.7 0.0 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter Atg14 PF10186.9 ORF87388 - 7.8e-05 21.9 8.2 9.8e-05 21.6 8.2 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 MAD PF05557.13 ORF87388 - 9.3e-05 21.0 7.4 0.00011 20.7 7.4 1.0 1 0 0 1 1 1 1 Mitotic checkpoint protein HOOK PF05622.12 ORF87388 - 0.0001 20.7 9.3 0.00013 20.3 9.3 1.1 1 0 0 1 1 1 1 HOOK protein YkyA PF10368.9 ORF87388 - 0.00021 21.0 7.5 0.00097 18.9 8.3 1.6 2 0 0 2 2 2 1 Putative cell-wall binding lipoprotein Spc7 PF08317.11 ORF87388 - 0.00043 19.3 9.1 0.00058 18.8 9.1 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF812 PF05667.11 ORF87388 - 0.00043 19.3 5.2 0.00046 19.2 5.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Exonuc_VII_L PF02601.15 ORF87388 - 0.00098 18.8 3.7 0.0011 18.6 3.7 1.2 1 0 0 1 1 1 1 Exonuclease VII, large subunit AAA_13 PF13166.6 ORF87388 - 0.0012 17.6 2.8 0.0014 17.4 2.8 1.2 1 0 0 1 1 1 1 AAA domain Laminin_II PF06009.12 ORF87388 - 0.0017 18.4 5.1 0.003 17.6 5.1 1.5 1 0 0 1 1 1 1 Laminin Domain II Filament PF00038.21 ORF87388 - 0.0032 17.1 8.3 0.0047 16.6 8.3 1.3 1 0 0 1 1 1 1 Intermediate filament protein ATG16 PF08614.11 ORF87388 - 0.0035 17.6 10.5 0.0041 17.4 10.5 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) TMPIT PF07851.13 ORF87388 - 0.0038 16.5 4.7 0.0049 16.2 4.7 1.1 1 0 0 1 1 1 1 TMPIT-like protein MCPsignal PF00015.21 ORF87388 - 0.0041 17.0 3.5 0.0061 16.4 3.5 1.2 1 0 0 1 1 1 1 Methyl-accepting chemotaxis protein (MCP) signalling domain PIN_8 PF18476.1 ORF87388 - 0.0047 16.8 2.6 0.0063 16.4 2.6 1.2 1 0 0 1 1 1 1 PIN like domain DUF3450 PF11932.8 ORF87388 - 0.0064 15.8 9.6 0.01 15.2 9.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) DUF3584 PF12128.8 ORF87388 - 0.0087 13.6 8.9 0.011 13.3 8.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) HemX PF04375.14 ORF87388 - 0.012 14.9 6.4 0.014 14.7 6.4 1.2 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF724 PF05266.14 ORF87388 - 0.014 15.2 6.0 0.018 14.9 6.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Fmp27_WPPW PF10359.9 ORF87388 - 0.014 14.3 3.7 0.016 14.1 3.7 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain FliJ PF02050.16 ORF87388 - 0.016 15.4 13.9 0.02 15.1 11.3 2.1 1 1 1 2 2 2 0 Flagellar FliJ protein DUF4200 PF13863.6 ORF87388 - 0.022 15.1 13.1 0.035 14.5 13.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) DUF16 PF01519.16 ORF87388 - 0.028 14.9 8.6 0.068 13.7 8.6 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 ExsD PF16806.5 ORF87388 - 0.029 14.3 0.8 0.035 14.0 0.8 1.2 1 0 0 1 1 1 0 Antiactivator protein ExsD DivIVA PF05103.13 ORF87388 - 0.029 14.4 8.3 0.048 13.8 8.3 1.3 1 0 0 1 1 1 0 DivIVA protein DUF3958 PF13125.6 ORF87388 - 0.031 14.5 3.3 0.031 14.5 3.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3958) DUF1664 PF07889.12 ORF87388 - 0.034 14.2 6.8 0.06 13.4 6.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.12 ORF87388 - 0.034 14.2 16.2 0.32 11.1 10.7 2.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein HAUS6_N PF14661.6 ORF87388 - 0.036 13.6 7.5 0.047 13.3 7.5 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus IFT57 PF10498.9 ORF87388 - 0.038 13.0 6.1 0.055 12.4 6.1 1.3 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 DUF745 PF05335.13 ORF87388 - 0.039 13.7 12.3 0.023 14.4 9.2 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF745) Vps54_N PF10475.9 ORF87388 - 0.044 13.1 2.7 0.064 12.5 2.7 1.4 1 0 0 1 1 1 0 Vacuolar-sorting protein 54, of GARP complex DASH_Duo1 PF08651.10 ORF87388 - 0.063 13.1 2.8 9.2 6.1 2.2 2.5 1 1 0 2 2 2 0 DASH complex subunit Duo1 FAM76 PF16046.5 ORF87388 - 0.071 12.4 5.9 0.083 12.2 5.9 1.1 1 0 0 1 1 1 0 FAM76 protein Lant_dehydr_C PF14028.6 ORF87388 - 0.096 12.2 3.0 0.13 11.8 3.0 1.2 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term NleF_casp_inhib PF16809.5 ORF87388 - 0.11 12.4 4.1 0.22 11.4 4.1 1.5 1 1 0 1 1 1 0 NleF caspase inhibitor V_ATPase_I PF01496.19 ORF87388 - 0.12 10.3 4.4 0.14 10.1 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4407 PF14362.6 ORF87388 - 0.14 11.5 6.0 0.15 11.4 6.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Prominin PF05478.11 ORF87388 - 0.15 10.0 1.0 0.21 9.5 1.0 1.3 1 0 0 1 1 1 0 Prominin Fib_alpha PF08702.10 ORF87388 - 0.19 11.9 5.7 0.33 11.1 5.7 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family ADIP PF11559.8 ORF87388 - 0.21 11.6 11.3 0.34 11.0 11.3 1.4 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding kleA_kleC PF17383.2 ORF87388 - 0.22 11.9 8.6 0.63 10.4 1.6 2.4 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A OmpH PF03938.14 ORF87388 - 0.24 11.8 12.7 0.43 10.9 12.7 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) KxDL PF10241.9 ORF87388 - 0.25 11.6 9.0 5.6 7.3 8.7 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein Mobilization_B PF17511.2 ORF87388 - 0.28 11.5 3.4 0.5 10.7 3.4 1.4 1 0 0 1 1 1 0 Mobilization protein B 5_nucleotid PF05761.14 ORF87388 - 0.36 9.7 4.6 0.44 9.4 4.6 1.1 1 0 0 1 1 1 0 5' nucleotidase family DUF5320 PF17253.2 ORF87388 - 0.4 11.8 1.2 0.78 10.8 0.7 1.9 1 1 1 2 2 1 0 Family of unknown function (DUF5320) Exonuc_VII_S PF02609.16 ORF87388 - 0.43 10.7 8.0 0.36 10.9 5.2 2.1 1 1 1 2 2 2 0 Exonuclease VII small subunit GAS PF13851.6 ORF87388 - 0.53 9.6 13.8 1.6 8.0 13.4 1.8 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Fzo_mitofusin PF04799.13 ORF87388 - 0.61 9.6 6.8 1.6 8.3 6.8 1.6 1 1 0 1 1 1 0 fzo-like conserved region FUSC PF04632.12 ORF87388 - 0.62 8.5 2.0 0.62 8.5 2.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family LMBR1 PF04791.16 ORF87388 - 0.64 8.9 1.2 0.68 8.8 1.2 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein UPF0242 PF06785.11 ORF87388 - 0.65 10.1 8.6 0.9 9.6 8.6 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Med9 PF07544.13 ORF87388 - 0.68 10.1 9.6 5.9 7.1 5.3 2.6 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF948 PF06103.11 ORF87388 - 0.71 10.2 4.8 5.3 7.4 4.7 2.2 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) XhlA PF10779.9 ORF87388 - 0.75 10.0 5.7 7.9 6.8 4.5 2.3 2 0 0 2 2 2 0 Haemolysin XhlA PSII_Pbs27 PF13326.6 ORF87388 - 0.78 10.1 6.5 0.53 10.6 3.7 1.9 1 1 1 2 2 2 0 Photosystem II Pbs27 CENP-H PF05837.12 ORF87388 - 0.83 10.1 10.3 1.4 9.4 10.3 1.4 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Sec8_exocyst PF04048.14 ORF87388 - 0.85 9.5 7.2 6.7 6.6 4.6 2.2 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain PRKG1_interact PF15898.5 ORF87388 - 0.92 10.4 11.3 7.5 7.5 11.1 2.1 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain FemAB PF02388.16 ORF87388 - 1.2 7.9 10.1 1.4 7.7 9.7 1.3 1 1 0 1 1 1 0 FemAB family OEP PF02321.18 ORF87388 - 1.3 8.8 11.3 13 5.5 11.3 2.1 1 1 0 1 1 1 0 Outer membrane efflux protein DUF2203 PF09969.9 ORF87388 - 1.3 9.8 8.0 8.5 7.1 6.7 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Seryl_tRNA_N PF02403.22 ORF87388 - 1.4 9.2 11.4 2.4 8.4 11.0 1.6 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Swi5 PF07061.11 ORF87388 - 1.8 8.7 12.2 1.9 8.6 2.5 2.4 1 1 1 2 2 2 0 Swi5 Syntaxin-6_N PF09177.11 ORF87388 - 1.8 9.2 9.2 5.9 7.5 9.2 2.0 1 1 0 1 1 1 0 Syntaxin 6, N-terminal HrpB7 PF09486.10 ORF87388 - 2.1 8.7 15.2 0.81 10.1 11.0 2.2 2 1 0 2 2 1 0 Bacterial type III secretion protein (HrpB7) COG2 PF06148.11 ORF87388 - 2.1 8.4 7.4 11 6.2 6.2 2.2 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Goodbye PF17109.5 ORF87388 - 2.3 8.7 5.7 31 5.0 5.4 2.2 1 1 1 2 2 2 0 fungal STAND N-terminal Goodbye domain FlaC_arch PF05377.11 ORF87388 - 2.4 8.6 5.6 39 4.7 0.1 2.7 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF2564 PF10819.8 ORF87388 - 2.4 8.6 11.8 0.13 12.7 1.5 2.9 2 1 2 4 4 3 0 Protein of unknown function (DUF2564) THOC7 PF05615.13 ORF87388 - 3.5 7.9 16.2 16 5.8 9.8 3.0 1 1 2 3 3 3 0 Tho complex subunit 7 DUF5339 PF17274.2 ORF87388 - 4.9 8.1 13.4 12 6.9 0.9 3.4 3 1 1 4 4 3 0 Family of unknown function (DUF5339) Peptidase_S49_N PF08496.10 ORF87388 - 7.4 6.6 10.3 13 5.8 10.3 1.6 1 1 0 1 1 1 0 Peptidase family S49 N-terminal DUF2570 PF10828.8 ORF87388 - 9.9 6.0 9.8 17 5.3 9.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) zf-RVT PF13966.6 ORF8727 - 0.037 14.7 0.2 0.062 14.0 0.2 1.4 1 0 0 1 1 1 0 zinc-binding in reverse transcriptase ABC_tran PF00005.27 ORF86203 - 3.7 8.0 7.2 62 4.1 7.1 2.1 1 1 0 1 1 1 0 ABC transporter Methyltransf_21 PF05050.12 ORF86027 - 0.0026 17.8 0.0 0.0035 17.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain HSP70 PF00012.20 ORF85262 - 8.1e-06 24.3 0.0 1e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Hsp70 protein BcrAD_BadFG PF01869.20 ORF85262 - 0.19 11.2 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family FGGY_C PF02782.16 ORF85262 - 0.19 11.4 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain DJ-1_PfpI PF01965.24 ORF85204 - 0.068 13.0 0.0 0.15 11.8 0.0 1.6 1 1 0 1 1 1 0 DJ-1/PfpI family Rieske PF00355.26 ORF84289 - 1e-11 44.6 1.1 1.6e-11 44.0 1.1 1.4 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain UCR_TM PF02921.14 ORF84289 - 0.00013 22.4 0.0 0.00024 21.5 0.0 1.4 1 0 0 1 1 1 1 Ubiquinol cytochrome reductase transmembrane region FXa_inhibition PF14670.6 ORF84289 - 0.15 12.4 3.5 0.26 11.6 3.5 1.3 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site YhfC PF10086.9 ORF82643 - 0.00027 20.4 0.8 0.00032 20.1 0.4 1.4 1 1 0 1 1 1 1 YhfC intramembrane metalloprotease Carb_anhydrase PF00194.21 ORF82478 - 4.9e-16 59.0 0.4 8.6e-16 58.2 0.4 1.4 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DUF3344 PF11824.8 ORF82478 - 0.051 13.2 0.0 0.076 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3344) DUF229 PF02995.17 ORF82291 - 9.8e-19 67.3 3.3 1.2e-18 67.0 3.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF82291 - 1.2e-09 38.0 0.3 1.6e-09 37.6 0.3 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF82291 - 0.015 14.9 0.3 0.017 14.7 0.3 1.3 1 1 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF1501 PF07394.12 ORF82291 - 0.072 12.1 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) zf-C2HC_2 PF13913.6 ORF80112 - 7.3e-20 70.4 10.6 4.4e-09 36.0 0.1 3.7 4 0 0 4 4 4 3 zinc-finger of a C2HC-type zf-C2H2 PF00096.26 ORF80112 - 8.6e-06 25.9 6.4 0.0024 18.2 0.5 3.7 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF80112 - 6.7e-05 23.4 13.9 0.0069 17.1 1.0 3.9 3 1 1 4 4 4 1 C2H2-type zinc finger zf-CpG_bind_C PF12269.8 ORF80112 - 0.00018 21.4 8.7 0.0076 16.1 0.1 3.0 1 1 2 3 3 3 2 CpG binding protein zinc finger C terminal domain DUF2318 PF10080.9 ORF80112 - 0.00095 19.3 4.3 3 8.0 0.1 3.1 3 0 0 3 3 3 2 Predicted membrane protein (DUF2318) OrsD PF12013.8 ORF80112 - 0.011 16.2 0.0 7.1 7.1 0.0 3.0 3 0 0 3 3 3 0 Orsellinic acid/F9775 biosynthesis cluster protein D ROS_MUCR PF05443.11 ORF80112 - 0.016 15.3 0.3 1.3 9.1 0.0 2.2 2 0 0 2 2 2 0 ROS/MUCR transcriptional regulator protein zf-Di19 PF05605.12 ORF80112 - 0.039 14.3 4.3 0.31 11.4 0.2 3.0 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding Rad50_zn_hook PF04423.14 ORF80112 - 0.04 13.8 6.7 0.071 13.0 0.1 3.5 4 0 0 4 4 3 0 Rad50 zinc hook motif TRAF6_Z2 PF18048.1 ORF80112 - 0.073 13.2 1.8 0.22 11.6 0.1 2.3 2 1 1 3 3 3 0 TNF receptor-associated factor 6 zinc finger 2 HNH_5 PF14279.6 ORF80112 - 0.13 12.1 6.2 34 4.4 0.0 3.9 3 1 1 4 4 4 0 HNH endonuclease zf-HYPF PF07503.12 ORF80112 - 0.18 11.6 2.1 11 5.9 0.1 3.1 3 0 0 3 3 3 0 HypF finger zinc-ribbons_6 PF07191.12 ORF80112 - 0.24 11.4 6.9 8.5 6.4 0.2 3.1 3 0 0 3 3 3 0 zinc-ribbons c-SKI_SMAD_bind PF08782.10 ORF80112 - 0.25 11.6 4.6 2.2 8.6 0.1 2.9 2 1 1 3 3 3 0 c-SKI Smad4 binding domain zf-BED PF02892.15 ORF80112 - 0.31 11.1 6.8 12 6.0 0.4 3.3 3 0 0 3 3 3 0 BED zinc finger zf-ribbon_3 PF13248.6 ORF80112 - 1.4 8.4 8.0 29 4.2 0.1 3.6 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 ORF80112 - 1.7 8.7 0.1 1.7 8.7 0.1 3.7 6 0 0 6 6 4 0 zinc-ribbon domain Zn_ribbon_recom PF13408.6 ORF80112 - 1.7 9.2 9.7 4 8.0 4.0 2.9 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-C2H2_6 PF13912.6 ORF80112 - 2.9 8.0 10.3 3.1 7.9 1.1 4.1 3 1 0 3 3 3 0 C2H2-type zinc finger Sgf11 PF08209.11 ORF80112 - 4.6 6.9 6.6 0.92 9.1 0.2 2.8 3 1 0 3 3 3 0 Sgf11 (transcriptional regulation protein) NUDIX PF00293.28 ORF79660 - 2.1e-09 37.5 0.1 2.9e-09 37.1 0.1 1.2 1 0 0 1 1 1 1 NUDIX domain zf-C2HC_2 PF13913.6 ORF77543 - 7.3e-20 70.4 10.6 4.4e-09 36.0 0.1 3.7 4 0 0 4 4 4 3 zinc-finger of a C2HC-type zf-C2H2 PF00096.26 ORF77543 - 8.6e-06 25.9 6.4 0.0024 18.2 0.5 3.7 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF77543 - 6.7e-05 23.4 13.9 0.0069 17.1 1.0 3.9 3 1 1 4 4 4 1 C2H2-type zinc finger zf-CpG_bind_C PF12269.8 ORF77543 - 0.00018 21.4 8.7 0.0076 16.1 0.1 3.0 1 1 2 3 3 3 2 CpG binding protein zinc finger C terminal domain DUF2318 PF10080.9 ORF77543 - 0.00095 19.3 4.3 3 8.0 0.1 3.1 3 0 0 3 3 3 2 Predicted membrane protein (DUF2318) OrsD PF12013.8 ORF77543 - 0.011 16.2 0.0 7.1 7.1 0.0 3.0 3 0 0 3 3 3 0 Orsellinic acid/F9775 biosynthesis cluster protein D ROS_MUCR PF05443.11 ORF77543 - 0.016 15.3 0.3 1.3 9.1 0.0 2.2 2 0 0 2 2 2 0 ROS/MUCR transcriptional regulator protein zf-Di19 PF05605.12 ORF77543 - 0.039 14.3 4.3 0.31 11.4 0.2 3.0 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding Rad50_zn_hook PF04423.14 ORF77543 - 0.04 13.8 6.7 0.071 13.0 0.1 3.5 4 0 0 4 4 3 0 Rad50 zinc hook motif TRAF6_Z2 PF18048.1 ORF77543 - 0.073 13.2 1.8 0.22 11.6 0.1 2.3 2 1 1 3 3 3 0 TNF receptor-associated factor 6 zinc finger 2 HNH_5 PF14279.6 ORF77543 - 0.13 12.1 6.2 34 4.4 0.0 3.9 3 1 1 4 4 4 0 HNH endonuclease zf-HYPF PF07503.12 ORF77543 - 0.18 11.6 2.1 11 5.9 0.1 3.1 3 0 0 3 3 3 0 HypF finger zinc-ribbons_6 PF07191.12 ORF77543 - 0.24 11.4 6.9 8.5 6.4 0.2 3.1 3 0 0 3 3 3 0 zinc-ribbons c-SKI_SMAD_bind PF08782.10 ORF77543 - 0.25 11.6 4.6 2.2 8.6 0.1 2.9 2 1 1 3 3 3 0 c-SKI Smad4 binding domain zf-BED PF02892.15 ORF77543 - 0.31 11.1 6.8 12 6.0 0.4 3.3 3 0 0 3 3 3 0 BED zinc finger zf-ribbon_3 PF13248.6 ORF77543 - 1.4 8.4 8.0 29 4.2 0.1 3.6 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 ORF77543 - 1.7 8.7 0.1 1.7 8.7 0.1 3.7 6 0 0 6 6 4 0 zinc-ribbon domain Zn_ribbon_recom PF13408.6 ORF77543 - 1.7 9.2 9.7 4 8.0 4.0 2.9 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-C2H2_6 PF13912.6 ORF77543 - 2.9 8.0 10.3 3.1 7.9 1.1 4.1 3 1 0 3 3 3 0 C2H2-type zinc finger Sgf11 PF08209.11 ORF77543 - 4.6 6.9 6.6 0.92 9.1 0.2 2.8 3 1 0 3 3 3 0 Sgf11 (transcriptional regulation protein) UPF0016 PF01169.19 ORF76996 - 3.9e-10 39.9 7.0 3.9e-10 39.9 7.0 1.6 2 0 0 2 2 2 1 Uncharacterized protein family UPF0016 Peptidase_U4 PF03419.13 ORF76996 - 0.0036 16.6 2.6 0.0047 16.3 2.6 1.1 1 0 0 1 1 1 1 Sporulation factor SpoIIGA MRAP PF15183.6 ORF76996 - 0.013 15.4 0.1 0.033 14.1 0.1 1.7 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family SPACA7 PF15307.6 ORF76996 - 0.062 13.6 2.6 0.19 12.0 2.7 1.7 2 0 0 2 2 2 0 Sperm acrosome-associated protein 7 Flu_B_M2 PF04772.12 ORF76996 - 0.085 13.1 0.7 6.8 7.0 0.0 2.2 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) G3P_antiterm PF04309.12 ORF76581 - 9.7e-63 210.7 0.5 1.1e-62 210.5 0.5 1.0 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator FMN_dh PF01070.18 ORF76581 - 0.074 12.1 0.0 0.078 12.0 0.0 1.1 1 0 0 1 1 1 0 FMN-dependent dehydrogenase PPR_2 PF13041.6 ORF76227 - 1.5e-09 37.9 0.0 3.9e-07 30.2 0.0 3.0 2 1 1 3 3 3 1 PPR repeat family PPR PF01535.20 ORF76227 - 6.4e-06 26.1 0.1 0.0039 17.3 0.0 3.4 4 0 0 4 4 4 1 PPR repeat PPR_3 PF13812.6 ORF76227 - 0.00028 20.9 0.0 0.0015 18.5 0.0 2.2 3 0 0 3 3 3 1 Pentatricopeptide repeat domain RCDG1 PF15725.5 ORF75140 - 0.19 12.2 15.3 2.6 8.5 0.4 3.3 1 1 2 3 3 3 0 Renal cancer differentiation gene 1 protein zf-C4_Topoisom PF01396.19 ORF73798 - 0.0018 18.0 0.1 0.0036 17.1 0.1 1.5 1 0 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger 2TM PF13239.6 ORF73750 - 0.018 15.3 9.9 0.018 15.3 9.9 2.3 1 1 1 2 2 2 0 2TM domain Abhydrolase_9_N PF15420.6 ORF73750 - 0.62 10.0 8.3 5 7.1 2.9 2.1 1 1 1 2 2 2 0 Alpha/beta-hydrolase family N-terminus Vpu PF00558.19 ORF73750 - 1.5 8.6 9.9 0.65 9.8 1.5 2.4 2 0 0 2 2 2 0 Vpu protein DctQ PF04290.12 ORF73750 - 3.7 7.5 15.5 0.1 12.5 5.5 2.3 1 1 1 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component 5TM-5TMR_LYT PF07694.12 ORF73750 - 4.7 6.7 9.1 0.53 9.8 2.8 1.9 2 0 0 2 2 2 0 5TMR of 5TMR-LYT CAP_N PF01213.19 ORF71960 - 3.9 6.9 6.1 5.1 6.5 6.1 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal LcrG PF07216.12 ORF71752 - 0.082 12.8 1.7 0.11 12.4 0.6 1.8 1 1 0 1 1 1 0 LcrG protein T6SS_VipA PF05591.12 ORF69608 - 0.29 10.9 3.5 0.17 11.7 0.4 2.0 2 1 0 2 2 2 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 SAGA-Tad1 PF12767.7 ORF69098 - 0.79 9.4 5.8 0.97 9.1 5.8 1.3 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit PAP_fibrillin PF04755.12 ORF68940 - 5.1e-14 52.7 0.0 1e-13 51.7 0.0 1.5 1 1 0 1 1 1 1 PAP_fibrillin DUF1211 PF06736.11 ORF67661 - 0.13 12.7 0.0 0.25 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) HSP70 PF00012.20 ORF67359 - 8.1e-06 24.3 0.0 1e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Hsp70 protein BcrAD_BadFG PF01869.20 ORF67359 - 0.19 11.2 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family FGGY_C PF02782.16 ORF67359 - 0.19 11.4 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain AA_permease_2 PF13520.6 ORF67023 - 1.1e-05 24.5 12.4 2e-05 23.6 12.4 1.4 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF67023 - 0.00016 20.4 10.3 0.00038 19.2 10.3 1.6 1 1 0 1 1 1 1 Amino acid permease Rab5ip PF07019.12 ORF67023 - 0.045 14.3 2.8 0.092 13.3 0.2 2.4 2 1 0 2 2 2 0 Rab5-interacting protein (Rab5ip) zf-RING_2 PF13639.6 ORF65411 - 3e-11 43.5 12.6 3e-11 43.5 12.6 1.7 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF65411 - 9.7e-10 38.6 7.7 2.5e-09 37.3 7.7 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF65411 - 4.2e-08 32.8 6.1 4.2e-08 32.8 6.1 2.0 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF65411 - 1.2e-07 31.5 8.1 2.8e-07 30.3 8.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF65411 - 1.9e-07 30.8 7.8 4.6e-07 29.6 7.8 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF65411 - 7.1e-06 25.9 11.7 7.1e-06 25.9 11.7 1.8 2 0 0 2 2 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF65411 - 2.6e-05 24.2 3.5 5e-05 23.3 3.5 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 ORF65411 - 0.0003 20.8 6.3 0.0006 19.9 6.3 1.5 1 0 0 1 1 1 1 RING-variant domain Prok-RING_1 PF14446.6 ORF65411 - 0.00094 19.1 2.7 0.00094 19.1 2.7 2.4 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-C3HC4_3 PF13920.6 ORF65411 - 0.0016 18.3 8.3 0.0033 17.3 8.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF65411 - 0.0017 18.5 7.3 0.0049 17.0 7.3 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF65411 - 0.0017 17.9 7.0 0.0035 16.9 7.0 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-Nse PF11789.8 ORF65411 - 0.0018 18.1 6.3 0.0048 16.7 6.3 1.7 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_4 PF14570.6 ORF65411 - 0.0019 17.9 9.4 0.0033 17.2 9.4 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-RING_5 PF14634.6 ORF65411 - 0.0026 17.7 10.4 0.005 16.8 10.4 1.5 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF65411 - 0.053 13.4 12.3 3.7 7.5 12.8 2.5 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 Rad50_zn_hook PF04423.14 ORF65411 - 0.11 12.4 5.1 0.96 9.3 0.4 2.7 2 1 0 2 2 2 0 Rad50 zinc hook motif Pns11_12 PF17464.2 ORF65411 - 0.13 12.0 1.9 0.25 11.0 1.9 1.4 1 0 0 1 1 1 0 Non-structural protein 11 and 12 zf-C3HC4_4 PF15227.6 ORF65411 - 0.17 12.1 8.0 0.2 11.9 6.4 2.0 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING zf-UDP PF14569.6 ORF65411 - 0.2 11.8 3.9 0.45 10.7 3.9 1.6 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-C2HC_2 PF13913.6 ORF64 - 7.3e-20 70.4 10.6 4.4e-09 36.0 0.1 3.7 4 0 0 4 4 4 3 zinc-finger of a C2HC-type zf-C2H2 PF00096.26 ORF64 - 8.6e-06 25.9 6.4 0.0024 18.2 0.5 3.7 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF64 - 6.7e-05 23.4 13.9 0.0069 17.1 1.0 3.9 3 1 1 4 4 4 1 C2H2-type zinc finger zf-CpG_bind_C PF12269.8 ORF64 - 0.00018 21.4 8.7 0.0076 16.1 0.1 3.0 1 1 2 3 3 3 2 CpG binding protein zinc finger C terminal domain DUF2318 PF10080.9 ORF64 - 0.00095 19.3 4.3 3 8.0 0.1 3.1 3 0 0 3 3 3 2 Predicted membrane protein (DUF2318) OrsD PF12013.8 ORF64 - 0.011 16.2 0.0 7.1 7.1 0.0 3.0 3 0 0 3 3 3 0 Orsellinic acid/F9775 biosynthesis cluster protein D ROS_MUCR PF05443.11 ORF64 - 0.016 15.3 0.3 1.3 9.1 0.0 2.2 2 0 0 2 2 2 0 ROS/MUCR transcriptional regulator protein zf-Di19 PF05605.12 ORF64 - 0.039 14.3 4.3 0.31 11.4 0.2 3.0 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding Rad50_zn_hook PF04423.14 ORF64 - 0.04 13.8 6.7 0.071 13.0 0.1 3.5 4 0 0 4 4 3 0 Rad50 zinc hook motif TRAF6_Z2 PF18048.1 ORF64 - 0.073 13.2 1.8 0.22 11.6 0.1 2.3 2 1 1 3 3 3 0 TNF receptor-associated factor 6 zinc finger 2 HNH_5 PF14279.6 ORF64 - 0.13 12.1 6.2 34 4.4 0.0 3.9 3 1 1 4 4 4 0 HNH endonuclease zf-HYPF PF07503.12 ORF64 - 0.18 11.6 2.1 11 5.9 0.1 3.1 3 0 0 3 3 3 0 HypF finger zinc-ribbons_6 PF07191.12 ORF64 - 0.24 11.4 6.9 8.5 6.4 0.2 3.1 3 0 0 3 3 3 0 zinc-ribbons c-SKI_SMAD_bind PF08782.10 ORF64 - 0.25 11.6 4.6 2.2 8.6 0.1 2.9 2 1 1 3 3 3 0 c-SKI Smad4 binding domain zf-BED PF02892.15 ORF64 - 0.31 11.1 6.8 12 6.0 0.4 3.3 3 0 0 3 3 3 0 BED zinc finger zf-ribbon_3 PF13248.6 ORF64 - 1.4 8.4 8.0 29 4.2 0.1 3.6 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 ORF64 - 1.7 8.7 0.1 1.7 8.7 0.1 3.7 6 0 0 6 6 4 0 zinc-ribbon domain Zn_ribbon_recom PF13408.6 ORF64 - 1.7 9.2 9.7 4 8.0 4.0 2.9 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-C2H2_6 PF13912.6 ORF64 - 2.9 8.0 10.3 3.1 7.9 1.1 4.1 3 1 0 3 3 3 0 C2H2-type zinc finger Sgf11 PF08209.11 ORF64 - 4.6 6.9 6.6 0.92 9.1 0.2 2.8 3 1 0 3 3 3 0 Sgf11 (transcriptional regulation protein) TatD_DNase PF01026.21 ORF63962 - 8.6e-49 166.2 0.0 9.5e-49 166.1 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase PRT_C PF08372.10 ORF62508 - 0.024 14.4 1.4 0.032 14.0 0.7 1.6 1 1 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal LrgB PF04172.16 ORF62138 - 1.3e-23 83.7 12.1 1.4e-23 83.5 12.1 1.1 1 0 0 1 1 1 1 LrgB-like family ZYG-11_interact PF05884.12 ORF62138 - 0.032 13.7 1.2 0.048 13.1 1.2 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 FMN_red PF03358.15 ORF61366 - 2.6e-34 118.2 0.0 3.4e-34 117.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 ORF61366 - 8.4e-07 28.9 0.0 1.7e-06 27.9 0.0 1.6 2 0 0 2 2 2 1 Flavodoxin-like fold Ion_trans PF00520.31 ORF60065 - 8.7e-14 51.3 21.4 1e-13 51.1 21.4 1.0 1 0 0 1 1 1 1 Ion transport protein DUF3292 PF11696.8 ORF59912 - 0.099 11.0 7.4 0.12 10.7 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) CpxA_peri PF16527.5 ORF59912 - 0.1 13.0 4.0 0.17 12.3 4.0 1.4 1 0 0 1 1 1 0 Two-component sensor protein CpxA, periplasmic domain Pyridoxal_deC PF00282.19 ORF59899 - 0.00016 20.5 0.2 0.00021 20.1 0.2 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain DUF2423 PF10338.9 ORF59364 - 0.02 15.1 1.0 0.02 15.1 1.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2423) ThuA PF06283.11 ORF59364 - 0.065 13.4 0.3 0.094 12.9 0.3 1.2 1 0 0 1 1 1 0 Trehalose utilisation SUIM_assoc PF16619.5 ORF57524 - 0.022 14.8 0.5 0.022 14.8 0.5 2.2 2 0 0 2 2 2 0 Unstructured region C-term to UIM in Ataxin3 DUF4083 PF13314.6 ORF57524 - 0.055 13.4 0.3 1 9.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) Methyltransf_3 PF01596.17 ORF56877 - 0.011 14.9 0.0 0.016 14.4 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_24 PF13578.6 ORF56877 - 0.046 14.7 0.1 0.13 13.3 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Keratin_2_tail PF16210.5 ORF56771 - 0.42 10.9 20.5 0.72 10.1 20.5 1.3 1 1 0 1 1 1 0 Keratin type II cytoskeletal 1 tail DUF2909 PF11137.8 ORF56625 - 0.083 12.8 3.5 0.18 11.7 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2909) Pro_isomerase PF00160.21 ORF56605 - 1.3e-47 162.0 0.1 1.5e-47 161.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RNase_H_2 PF13482.6 ORF56605 - 0.18 11.8 0.0 5.4 7.0 0.0 2.1 2 0 0 2 2 2 0 RNase_H superfamily TPR_2 PF07719.17 ORF56328 - 2.4e-08 33.5 0.1 1.4e-05 24.8 0.0 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF56328 - 3e-06 26.8 0.6 4.3e-05 23.2 0.0 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF56328 - 0.00014 21.9 2.0 0.0014 18.7 0.1 2.5 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF56328 - 0.00018 21.4 0.0 0.00058 19.9 0.0 1.9 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF56328 - 0.0012 19.0 0.6 0.0094 16.2 0.1 2.6 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF56328 - 0.054 14.1 2.1 0.093 13.4 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Rieske_2 PF13806.6 ORF55305 - 0.12 12.3 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain EF-hand_1 PF00036.32 ORF54485 - 4.3e-12 44.7 2.1 2.5e-05 23.5 0.2 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF54485 - 8.8e-11 40.8 2.7 0.00017 21.3 0.1 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF54485 - 9.8e-11 42.0 0.0 1.9e-10 41.0 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF54485 - 5.2e-08 32.6 0.4 3.1e-05 23.7 0.0 2.5 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF54485 - 1.4e-07 30.7 0.8 0.00016 21.0 0.1 2.7 2 0 0 2 2 2 2 EF hand DUF507 PF04368.13 ORF54485 - 0.016 15.1 0.1 0.021 14.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF507) SPARC_Ca_bdg PF10591.9 ORF54485 - 0.031 14.6 1.6 1.4 9.2 1.6 2.3 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region p25-alpha PF05517.12 ORF54485 - 0.052 13.7 0.5 0.45 10.7 0.3 2.0 1 1 1 2 2 2 0 p25-alpha SUA5 PF03481.13 ORF54485 - 0.18 12.4 0.7 0.29 11.7 0.7 1.4 1 1 0 1 1 1 0 Putative GTP-binding controlling metal-binding TetR_C_19 PF17924.1 ORF54485 - 0.27 11.9 5.6 0.47 11.1 1.5 2.2 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Herpes_UL6 PF01763.16 ORF54465 - 0.11 11.0 0.2 0.23 10.0 0.1 1.4 1 1 0 1 1 1 0 Herpesvirus UL6 like Pro_isomerase PF00160.21 ORF52048 - 5.2e-41 140.5 0.1 6.3e-41 140.3 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD zf-C2HC_2 PF13913.6 ORF51840 - 7.3e-20 70.4 10.6 4.4e-09 36.0 0.1 3.7 4 0 0 4 4 4 3 zinc-finger of a C2HC-type zf-C2H2 PF00096.26 ORF51840 - 8.6e-06 25.9 6.4 0.0024 18.2 0.5 3.7 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF51840 - 6.7e-05 23.4 13.9 0.0069 17.1 1.0 3.9 3 1 1 4 4 4 1 C2H2-type zinc finger zf-CpG_bind_C PF12269.8 ORF51840 - 0.00018 21.4 8.7 0.0076 16.1 0.1 3.0 1 1 2 3 3 3 2 CpG binding protein zinc finger C terminal domain DUF2318 PF10080.9 ORF51840 - 0.00095 19.3 4.3 3 8.0 0.1 3.1 3 0 0 3 3 3 2 Predicted membrane protein (DUF2318) OrsD PF12013.8 ORF51840 - 0.011 16.2 0.0 7.1 7.1 0.0 3.0 3 0 0 3 3 3 0 Orsellinic acid/F9775 biosynthesis cluster protein D ROS_MUCR PF05443.11 ORF51840 - 0.016 15.3 0.3 1.3 9.1 0.0 2.2 2 0 0 2 2 2 0 ROS/MUCR transcriptional regulator protein zf-Di19 PF05605.12 ORF51840 - 0.039 14.3 4.3 0.31 11.4 0.2 3.0 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding Rad50_zn_hook PF04423.14 ORF51840 - 0.04 13.8 6.7 0.071 13.0 0.1 3.5 4 0 0 4 4 3 0 Rad50 zinc hook motif TRAF6_Z2 PF18048.1 ORF51840 - 0.073 13.2 1.8 0.22 11.6 0.1 2.3 2 1 1 3 3 3 0 TNF receptor-associated factor 6 zinc finger 2 HNH_5 PF14279.6 ORF51840 - 0.13 12.1 6.2 34 4.4 0.0 3.9 3 1 1 4 4 4 0 HNH endonuclease zf-HYPF PF07503.12 ORF51840 - 0.18 11.6 2.1 11 5.9 0.1 3.1 3 0 0 3 3 3 0 HypF finger zinc-ribbons_6 PF07191.12 ORF51840 - 0.24 11.4 6.9 8.5 6.4 0.2 3.1 3 0 0 3 3 3 0 zinc-ribbons c-SKI_SMAD_bind PF08782.10 ORF51840 - 0.25 11.6 4.6 2.2 8.6 0.1 2.9 2 1 1 3 3 3 0 c-SKI Smad4 binding domain zf-BED PF02892.15 ORF51840 - 0.31 11.1 6.8 12 6.0 0.4 3.3 3 0 0 3 3 3 0 BED zinc finger zf-ribbon_3 PF13248.6 ORF51840 - 1.4 8.4 8.0 29 4.2 0.1 3.6 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 ORF51840 - 1.7 8.7 0.1 1.7 8.7 0.1 3.7 6 0 0 6 6 4 0 zinc-ribbon domain Zn_ribbon_recom PF13408.6 ORF51840 - 1.7 9.2 9.7 4 8.0 4.0 2.9 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-C2H2_6 PF13912.6 ORF51840 - 2.9 8.0 10.3 3.1 7.9 1.1 4.1 3 1 0 3 3 3 0 C2H2-type zinc finger Sgf11 PF08209.11 ORF51840 - 4.6 6.9 6.6 0.92 9.1 0.2 2.8 3 1 0 3 3 3 0 Sgf11 (transcriptional regulation protein) Rieske_2 PF13806.6 ORF51124 - 0.12 12.3 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain PPR_2 PF13041.6 ORF50834 - 1.5e-05 25.1 0.2 0.023 14.9 0.1 2.4 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF50834 - 5.7e-05 23.1 0.0 0.02 15.0 0.0 2.4 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF50834 - 0.00037 19.9 0.7 0.00093 18.6 0.7 1.7 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 ORF50834 - 0.046 14.0 0.2 1.8 9.0 0.1 2.7 2 0 0 2 2 2 0 PPR repeat TPR_14 PF13428.6 ORF50834 - 0.49 11.4 5.1 0.78 10.7 1.9 2.8 2 1 0 3 3 3 0 Tetratricopeptide repeat Putative_PNPOx PF01243.20 ORF50623 - 0.00031 20.9 0.0 0.00055 20.1 0.0 1.5 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase NCD3G PF07562.14 ORF50006 - 0.83 9.7 4.9 3.1 7.8 0.2 2.7 3 0 0 3 3 3 0 Nine Cysteines Domain of family 3 GPCR COPI_assoc PF08507.10 ORF49529 - 0.00018 21.6 7.1 0.00032 20.7 7.1 1.4 1 1 0 1 1 1 1 COPI associated protein ExoD PF06055.12 ORF49529 - 0.93 8.8 5.0 0.12 11.7 0.4 1.8 2 1 0 2 2 2 0 Exopolysaccharide synthesis, ExoD LptC PF06835.13 ORF49124 - 6.4e-54 182.2 2.1 7.3e-54 182.0 2.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide-assembly, LptC-related BPA_C PF18040.1 ORF45521 - 0.019 14.9 6.8 0.059 13.3 2.7 2.3 2 0 0 2 2 2 0 beta porphyranase A C-terminal OrfB_IS605 PF01385.19 ORF45521 - 0.049 13.9 0.4 0.049 13.9 0.4 2.6 1 1 2 3 3 3 0 Probable transposase cNMP_binding PF00027.29 ORF45499 - 0.0051 16.9 0.0 0.0085 16.2 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain NPV_P10 PF05531.12 ORF41420 - 0.21 12.1 2.2 2 8.9 0.8 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF725 PF05267.12 ORF41420 - 0.22 11.5 10.9 0.32 11.0 3.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF725) ALS_ss_C PF10369.9 ORF41420 - 0.24 11.6 1.2 0.67 10.2 0.1 2.2 2 1 1 3 3 3 0 Small subunit of acetolactate synthase KASH_CCD PF14662.6 ORF41420 - 0.3 10.9 9.0 0.14 12.0 5.8 1.9 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Laminin_II PF06009.12 ORF41420 - 0.38 10.8 6.9 0.16 12.0 2.7 2.2 2 1 0 2 2 2 0 Laminin Domain II DUF1664 PF07889.12 ORF41420 - 0.53 10.3 6.3 0.39 10.8 3.2 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF3523 PF12037.8 ORF41420 - 0.66 9.3 5.3 0.92 8.8 5.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) DUF2570 PF10828.8 ORF41420 - 3.2 7.6 8.5 1.2 9.0 6.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2570) DUF16 PF01519.16 ORF41420 - 3.9 8.0 9.0 2.8 8.5 7.1 1.7 2 0 0 2 2 2 0 Protein of unknown function DUF16 RRM_1 PF00076.22 ORF41145 - 4.1e-09 36.1 0.5 8.5e-09 35.1 0.2 1.7 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 ORF41145 - 0.00012 22.0 0.0 0.00019 21.3 0.0 1.3 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RRM_3 PF08777.11 ORF41145 - 0.00049 20.1 0.1 0.001 19.1 0.1 1.5 1 0 0 1 1 1 1 RNA binding motif RNA_bind PF08675.11 ORF41145 - 0.016 15.2 0.0 0.029 14.4 0.0 1.4 1 0 0 1 1 1 0 RNA binding domain LrgB PF04172.16 ORF40060 - 1.3e-23 83.7 12.1 1.4e-23 83.5 12.1 1.1 1 0 0 1 1 1 1 LrgB-like family ZYG-11_interact PF05884.12 ORF40060 - 0.032 13.7 1.2 0.048 13.1 1.2 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 DctP PF03480.13 ORF38404 - 0.048 13.0 0.0 0.067 12.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein, family 7 AAA_28 PF13521.6 ORF36573 - 2.7e-08 34.3 0.0 6e-08 33.1 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF36573 - 0.048 14.2 0.0 0.1 13.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain Acylphosphatase PF00708.18 ORF36573 - 0.14 12.6 0.3 5.5 7.5 0.0 2.2 2 0 0 2 2 2 0 Acylphosphatase EMC3_TMCO1 PF01956.16 ORF33865 - 1.3e-29 103.1 5.0 1.6e-29 102.8 5.0 1.0 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like POR PF01558.18 ORF33865 - 0.069 13.2 0.0 0.091 12.8 0.0 1.2 1 0 0 1 1 1 0 Pyruvate ferredoxin/flavodoxin oxidoreductase CHD5 PF04420.14 ORF33865 - 0.75 9.6 5.0 1.8 8.4 5.0 1.5 1 1 0 1 1 1 0 CHD5-like protein DUF1732 PF08340.11 ORF33536 - 1.4e-34 117.9 7.0 1.4e-34 117.9 7.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1732) YicC_N PF03755.13 ORF33536 - 2.8e-07 31.1 0.1 2.8e-07 31.1 0.1 2.5 2 1 0 2 2 2 1 YicC-like family, N-terminal region UBN_AB PF14075.6 ORF33536 - 0.036 13.8 4.7 0.057 13.1 2.4 2.1 1 1 1 2 2 2 0 Ubinuclein conserved middle domain DDE_Tnp_IS66 PF03050.14 ORF33536 - 0.053 13.0 2.3 0.072 12.5 0.4 1.9 2 0 0 2 2 2 0 Transposase IS66 family Cnn_1N PF07989.11 ORF33536 - 2.8 8.2 13.4 0.63 10.2 1.0 2.7 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 TMEM238 PF15125.6 ORF32864 - 0.033 14.4 0.8 0.033 14.4 0.8 2.0 2 0 0 2 2 2 0 TMEM238 protein family DUF5408 PF17402.2 ORF32864 - 1.4 8.9 4.7 0.25 11.3 0.3 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5408) Ferric_reduct PF01794.19 ORF32864 - 1.8 8.7 15.3 0.58 10.3 9.2 2.7 2 1 1 3 3 3 0 Ferric reductase like transmembrane component DUF2207 PF09972.9 ORF32864 - 2.5 6.8 3.8 2.8 6.6 3.8 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-RanBP PF00641.18 ORF30717 - 2.3e-10 39.6 5.7 3.8e-10 38.9 5.7 1.3 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others CSD PF00313.22 ORF30717 - 1e-05 25.3 0.0 1.8e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain zf-4CXXC_R1 PF10497.9 ORF30717 - 0.008 16.4 0.3 0.013 15.7 0.3 1.4 1 0 0 1 1 1 1 Zinc-finger domain of monoamine-oxidase A repressor R1 DZR PF12773.7 ORF30717 - 0.031 14.3 0.9 0.053 13.5 0.9 1.3 1 0 0 1 1 1 0 Double zinc ribbon TackOD1 PF18551.1 ORF30717 - 0.034 13.8 0.1 0.044 13.5 0.1 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 Vps36-NZF-N PF16988.5 ORF30717 - 0.16 11.4 2.6 0.36 10.2 2.6 1.5 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain DUF35_N PF12172.8 ORF30717 - 0.3 11.0 4.7 2.4 8.1 1.6 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF1825 PF08855.10 ORF27705 - 0.00015 21.7 0.2 0.00031 20.6 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF1825) UPF0016 PF01169.19 ORF26113 - 3.9e-10 39.9 7.0 3.9e-10 39.9 7.0 1.6 2 0 0 2 2 2 1 Uncharacterized protein family UPF0016 Peptidase_U4 PF03419.13 ORF26113 - 0.0024 17.2 2.0 0.0031 16.9 2.0 1.1 1 0 0 1 1 1 1 Sporulation factor SpoIIGA MRAP PF15183.6 ORF26113 - 0.013 15.4 0.1 0.033 14.1 0.1 1.7 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family SPACA7 PF15307.6 ORF26113 - 0.061 13.6 2.7 0.19 12.0 2.7 1.8 2 0 0 2 2 2 0 Sperm acrosome-associated protein 7 Flu_B_M2 PF04772.12 ORF26113 - 0.089 13.0 0.7 6.8 7.0 0.0 2.2 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) Sigma70_r4_2 PF08281.12 ORF26003 - 1.8e-19 69.2 0.2 4.8e-19 67.8 0.2 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 ORF26003 - 2.3e-18 65.7 0.2 4.6e-18 64.7 0.2 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 ORF26003 - 6.4e-11 41.6 0.0 1.6e-10 40.3 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 ORF26003 - 1.2e-08 35.1 0.1 3.7e-08 33.5 0.1 1.8 1 1 0 1 1 1 1 ECF sigma factor HTH_23 PF13384.6 ORF26003 - 0.00019 21.1 0.0 0.00053 19.7 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_16 PF12645.7 ORF26003 - 0.081 13.0 0.0 0.24 11.5 0.0 1.9 2 1 0 2 2 2 0 Helix-turn-helix domain ART PF01129.18 ORF25139 - 0.018 14.3 0.0 0.024 13.9 0.0 1.2 1 0 0 1 1 1 0 NAD:arginine ADP-ribosyltransferase EF-hand_1 PF00036.32 ORF22517 - 5.5e-13 47.5 4.0 6.7e-07 28.4 0.4 2.7 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF22517 - 1.1e-12 46.8 3.8 5.7e-07 28.7 0.7 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF22517 - 1.3e-12 48.0 0.1 2.4e-12 47.1 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF22517 - 6.4e-11 41.3 1.5 0.00039 20.1 0.1 2.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF22517 - 1.9e-08 34.0 1.6 1.7e-07 31.0 0.1 2.7 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF22517 - 0.013 15.8 0.3 0.29 11.4 0.3 2.2 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF22517 - 0.017 15.4 0.1 0.038 14.3 0.1 1.5 1 0 0 1 1 1 0 EF-hand domain Fer4_24 PF18109.1 ORF22517 - 0.024 14.9 0.2 0.079 13.2 0.2 2.0 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain TPH PF13868.6 ORF2107 - 2.3e-24 85.6 65.8 3.4e-24 85.0 65.8 1.2 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF4286 PF14114.6 ORF2107 - 0.032 14.7 3.3 0.054 14.0 2.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4286) ABATE PF07336.11 ORF2107 - 0.2 12.4 4.4 0.28 11.8 4.4 1.3 1 0 0 1 1 1 0 Putative stress-induced transcription regulator NPV_P10 PF05531.12 ORF21052 - 0.21 12.1 2.2 2 8.9 0.8 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF725 PF05267.12 ORF21052 - 0.22 11.5 10.9 0.32 11.0 3.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF725) ALS_ss_C PF10369.9 ORF21052 - 0.24 11.6 1.2 0.67 10.2 0.1 2.2 2 1 1 3 3 3 0 Small subunit of acetolactate synthase KASH_CCD PF14662.6 ORF21052 - 0.3 10.9 9.0 0.14 12.0 5.8 1.9 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Laminin_II PF06009.12 ORF21052 - 0.38 10.8 6.9 0.16 12.0 2.7 2.2 2 1 0 2 2 2 0 Laminin Domain II DUF1664 PF07889.12 ORF21052 - 0.53 10.3 6.3 0.39 10.8 3.2 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF3523 PF12037.8 ORF21052 - 0.66 9.3 5.3 0.92 8.8 5.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) DUF2570 PF10828.8 ORF21052 - 3.2 7.6 8.5 1.2 9.0 6.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2570) DUF16 PF01519.16 ORF21052 - 3.9 8.0 9.0 2.8 8.5 7.1 1.7 2 0 0 2 2 2 0 Protein of unknown function DUF16 WD40 PF00400.32 ORF20758 - 2.5e-29 100.9 6.0 6e-07 30.1 0.0 5.1 5 0 0 5 5 5 4 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF20758 - 6.2e-10 38.6 1.6 0.048 12.6 0.3 3.9 1 1 2 3 3 3 3 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 ORF20758 - 2.2e-05 24.6 0.0 0.27 11.6 0.0 3.0 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF20758 - 0.031 13.0 0.6 3 6.4 0.0 2.7 1 1 1 3 3 3 0 Nucleoporin Nup120/160 PD40 PF07676.12 ORF20758 - 0.23 11.5 1.3 22 5.1 0.7 3.8 4 1 0 4 4 4 0 WD40-like Beta Propeller Repeat Ribosomal_S8e PF01201.22 ORF19277 - 8.1e-48 162.1 2.4 9.3e-48 161.9 2.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e Mu-like_Pro PF10123.9 ORF19277 - 0.031 13.9 0.0 0.034 13.7 0.0 1.1 1 0 0 1 1 1 0 Mu-like prophage I protein Lip_prot_lig_C PF10437.9 ORF19277 - 0.12 12.4 0.4 0.34 10.9 0.2 1.9 1 1 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus DUF2878 PF11086.8 ORF18672 - 6.3e-24 84.9 16.1 7.4e-24 84.7 16.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2878) MR_MLE_C PF13378.6 ORF17577 - 1.1e-43 149.3 0.0 1.3e-43 149.1 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like Presenilin PF01080.17 ORF17385 - 8.2 5.1 5.2 9.7 4.8 5.2 1.2 1 0 0 1 1 1 0 Presenilin Statherin PF03875.13 ORF17201 - 0.39 10.8 5.7 0.87 9.7 5.7 1.6 1 0 0 1 1 1 0 Statherin GMC_oxred_C PF05199.13 ORF1702 - 6.3e-34 117.6 0.1 8.2e-34 117.2 0.1 1.1 1 0 0 1 1 1 1 GMC oxidoreductase OS-D PF03392.13 ORF15301 - 0.37 10.9 4.9 0.77 9.9 4.9 1.6 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D VHP PF02209.19 ORF14724 - 7.2e-16 58.0 3.1 1.2e-15 57.3 3.1 1.4 1 0 0 1 1 1 1 Villin headpiece domain DUF220 PF02713.14 ORF14724 - 0.032 14.3 0.0 7.3 6.8 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function DUF220 EF-hand_1 PF00036.32 ORF14439 - 1.9e-11 42.6 2.3 1.9e-05 23.9 0.1 2.5 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF14439 - 1.7e-10 40.0 0.3 0.00018 21.2 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF14439 - 2e-09 36.5 1.0 0.00036 19.9 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF14439 - 4e-09 36.8 0.1 7.7e-09 35.9 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF14439 - 2.1e-05 24.3 1.4 0.0048 16.7 0.1 3.1 2 1 1 3 3 3 2 EF-hand domain pair Ion_trans PF00520.31 ORF14439 - 0.12 11.6 5.6 0.19 11.0 5.6 1.3 1 0 0 1 1 1 0 Ion transport protein SET PF00856.28 ORF14056 - 1.9e-10 41.4 0.0 3.8e-10 40.4 0.0 1.5 2 0 0 2 2 2 1 SET domain AAA_25 PF13481.6 ORF13375 - 0.00024 20.8 0.0 0.00045 19.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 ORF13375 - 0.0033 17.4 0.0 0.0044 17.0 0.0 1.2 1 0 0 1 1 1 1 NACHT domain DNA_pol3_delta2 PF13177.6 ORF13375 - 0.0084 15.9 0.0 0.0096 15.7 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit IstB_IS21 PF01695.17 ORF13375 - 0.033 13.9 1.0 0.33 10.7 0.1 2.0 1 1 1 2 2 2 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF13375 - 0.051 14.0 0.0 0.062 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain TIP49 PF06068.13 ORF13375 - 0.17 11.0 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain MSP1a PF11670.8 ORF12081 - 9.3 5.5 8.1 15 4.8 8.1 1.3 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) Ribul_P_3_epim PF00834.19 ORF11925 - 3.9e-41 140.6 0.0 4.5e-41 140.4 0.0 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Pro_isomerase PF00160.21 ORF11830 - 1.3e-47 162.0 0.1 1.5e-47 161.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RNase_H_2 PF13482.6 ORF11830 - 0.18 11.8 0.0 5.4 7.0 0.0 2.1 2 0 0 2 2 2 0 RNase_H superfamily EF-hand_7 PF13499.6 ORF112387 - 7.8e-18 64.7 11.0 3.1e-08 34.0 1.8 3.5 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF112387 - 5.2e-17 60.3 9.9 0.0018 18.1 0.3 4.9 4 1 1 5 5 5 4 EF-hand domain EF-hand_1 PF00036.32 ORF112387 - 1.4e-15 55.6 15.4 0.00036 19.9 0.0 5.7 6 1 0 6 6 6 4 EF hand EF-hand_8 PF13833.6 ORF112387 - 3.2e-12 46.1 10.7 6e-08 32.4 0.9 3.1 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF112387 - 5.2e-09 35.2 18.2 6.6e-05 22.2 0.8 4.9 5 1 0 5 5 5 3 EF hand Caleosin PF05042.13 ORF112387 - 0.0028 17.6 1.5 1.2 9.1 0.0 3.1 1 1 2 3 3 3 2 Caleosin related protein Dockerin_1 PF00404.18 ORF112387 - 0.03 14.5 1.0 0.68 10.2 0.3 2.9 2 1 1 3 3 3 0 Dockerin type I domain XS PF03468.14 ORF112387 - 0.064 13.6 0.0 0.22 11.8 0.0 1.9 1 1 0 1 1 1 0 XS domain DUF4116 PF13475.6 ORF112239 - 4.4e-21 74.3 0.0 4.7e-12 45.4 0.0 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF4116) FIST_C PF10442.9 ORF112239 - 0.081 12.9 0.2 0.11 12.4 0.2 1.4 1 0 0 1 1 1 0 FIST C domain HTH_32 PF13565.6 ORF112239 - 3.2 8.4 8.1 3.3 8.4 1.0 3.0 1 1 2 3 3 3 0 Homeodomain-like domain Pro_isomerase PF00160.21 ORF10978 - 1.3e-47 162.0 0.1 1.5e-47 161.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RNase_H_2 PF13482.6 ORF10978 - 0.18 11.8 0.0 5.4 7.0 0.0 2.1 2 0 0 2 2 2 0 RNase_H superfamily RCDG1 PF15725.5 ORF109719 - 0.19 12.2 15.3 2.6 8.5 0.4 3.3 1 1 2 3 3 3 0 Renal cancer differentiation gene 1 protein MORN PF02493.20 ORF108083 - 6.8e-23 79.1 18.3 3.2e-08 33.0 0.4 5.3 4 1 0 4 4 4 4 MORN repeat IQ PF00612.27 ORF108083 - 0.026 14.3 0.1 0.045 13.5 0.1 1.4 1 0 0 1 1 1 0 IQ calmodulin-binding motif CSN5_C PF18323.1 ORF108083 - 0.068 14.1 0.1 0.12 13.3 0.1 1.5 1 0 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain DUF1741 PF08427.10 ORF108083 - 0.19 11.4 0.7 0.25 11.0 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1741) DUF3048_C PF17479.2 ORF108083 - 2 8.8 7.8 2.3 8.6 3.0 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain CSD PF00313.22 ORF107475 - 1.4e-12 47.2 0.1 1.4e-10 40.9 0.0 2.7 3 0 0 3 3 3 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF107475 - 0.025 14.2 0.0 0.17 11.6 0.0 2.1 2 0 0 2 2 2 0 Ribonuclease B OB domain Epimerase PF01370.21 ORF105844 - 3.6e-20 72.5 0.0 4.3e-20 72.2 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF105844 - 1.8e-18 66.5 0.0 2.2e-18 66.3 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF105844 - 5.5e-15 55.6 0.0 7e-15 55.2 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF105844 - 5.6e-10 38.8 0.0 7.4e-10 38.4 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF105844 - 6.8e-10 38.5 0.0 9.7e-10 38.1 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF105844 - 6.9e-09 35.8 0.0 9.6e-09 35.4 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 ORF105844 - 8.1e-06 25.9 0.0 1.5e-05 25.0 0.0 1.3 1 1 0 1 1 1 1 KR domain adh_short PF00106.25 ORF105844 - 0.0057 16.1 0.0 0.015 14.8 0.0 1.7 1 1 0 1 1 1 1 short chain dehydrogenase IP_trans PF02121.18 ORF105844 - 0.0066 16.1 0.3 0.011 15.3 0.3 1.3 1 0 0 1 1 1 1 Phosphatidylinositol transfer protein LigB PF02900.18 ORF105844 - 0.0077 15.3 0.0 0.01 15.0 0.0 1.1 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase NmrA PF05368.13 ORF105844 - 0.0087 15.6 0.0 0.016 14.8 0.0 1.6 1 1 0 1 1 1 1 NmrA-like family RmlD_sub_bind PF04321.17 ORF105844 - 0.0092 15.1 0.0 0.013 14.6 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain Sacchrp_dh_NADP PF03435.18 ORF105844 - 0.011 16.0 0.2 0.077 13.3 0.2 1.9 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain TRP PF06011.12 ORF105717 - 0.19 10.4 5.1 0.026 13.3 0.4 1.7 2 0 0 2 2 2 0 Transient receptor potential (TRP) ion channel Peptidase_U4 PF03419.13 ORF104854 - 0.017 14.4 5.0 0.024 13.9 5.0 1.2 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Afaf PF15339.6 ORF104854 - 0.034 13.9 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Acrosome formation-associated factor DUF2208 PF09973.9 ORF104854 - 6 6.4 6.6 0.6 9.7 1.1 1.8 1 1 1 2 2 2 0 Predicted membrane protein (DUF2208) INTAP PF16617.5 ORF101303 - 2.1 8.8 8.7 4.4 7.7 7.7 2.1 1 1 1 2 2 2 0 Intersectin and clathrin adaptor AP2 binding region UPF0016 PF01169.19 ORF10107 - 3.9e-10 39.9 7.0 3.9e-10 39.9 7.0 1.6 2 0 0 2 2 2 1 Uncharacterized protein family UPF0016 Peptidase_U4 PF03419.13 ORF10107 - 0.0024 17.2 2.0 0.0031 16.9 2.0 1.1 1 0 0 1 1 1 1 Sporulation factor SpoIIGA MRAP PF15183.6 ORF10107 - 0.013 15.4 0.1 0.033 14.1 0.1 1.7 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family SPACA7 PF15307.6 ORF10107 - 0.061 13.6 2.7 0.19 12.0 2.7 1.8 2 0 0 2 2 2 0 Sperm acrosome-associated protein 7 Flu_B_M2 PF04772.12 ORF10107 - 0.089 13.0 0.7 6.8 7.0 0.0 2.2 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) Complex1_51K PF01512.17 NODE_37503_length_568_cov_2.393996_g30253_i0forward_frame_1 - 1.6e-46 157.9 0.0 2e-46 157.7 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit SLBB PF10531.9 NODE_37503_length_568_cov_2.393996_g30253_i0forward_frame_1 - 1.4e-09 37.7 0.0 4.1e-09 36.2 0.0 1.8 2 0 0 2 2 2 1 SLBB domain Cadherin_C_2 PF16492.5 NODE_37494_length_568_cov_78.018762_g30244_i0forward_frame_1 - 0.28 11.9 0.4 0.28 11.9 0.4 2.8 3 1 0 3 3 3 0 Cadherin cytoplasmic C-terminal PHD PF00628.29 NODE_37475_length_568_cov_209.872420_g30226_i0reverse_frame_1 - 0.003 17.4 3.5 0.003 17.4 3.5 1.9 2 1 0 2 2 2 1 PHD-finger PHD_2 PF13831.6 NODE_37475_length_568_cov_209.872420_g30226_i0reverse_frame_1 - 0.021 14.4 3.2 0.05 13.2 3.2 1.6 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 NODE_37475_length_568_cov_209.872420_g30226_i0reverse_frame_1 - 0.098 12.6 4.8 0.18 11.7 4.8 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-RING_9 PF13901.6 NODE_37475_length_568_cov_209.872420_g30226_i0reverse_frame_1 - 5.2 7.0 13.5 0.95 9.4 8.8 1.9 1 1 1 2 2 2 0 Putative zinc-RING and/or ribbon FUSC PF04632.12 NODE_37471_length_568_cov_272.658537_g27303_i1forward_frame_1 - 0.08 11.5 9.7 0.11 11.1 9.7 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Epimerase PF01370.21 NODE_37457_length_569_cov_2.932584_g30211_i0forward_frame_1 - 5.8e-12 45.6 0.0 2.3e-11 43.6 0.0 1.8 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 NODE_37457_length_569_cov_2.932584_g30211_i0forward_frame_1 - 1.8e-09 37.0 0.0 2.2e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 NODE_37457_length_569_cov_2.932584_g30211_i0forward_frame_1 - 0.00021 20.8 0.0 0.00028 20.4 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 NODE_37457_length_569_cov_2.932584_g30211_i0forward_frame_1 - 0.15 11.2 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 Male sterility protein Pkinase PF00069.25 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_1 - 1.1e-40 139.7 0.1 5.9e-40 137.3 0.1 1.8 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_1 - 2.9e-21 75.9 0.3 1.2e-14 54.3 0.0 2.0 1 1 1 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_1 - 0.00016 20.7 0.1 0.00019 20.5 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_1 - 0.0014 18.0 0.1 0.0018 17.6 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_1 - 0.0028 17.0 0.2 0.015 14.6 0.0 1.9 2 0 0 2 2 2 1 Kinase-like APH PF01636.23 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_1 - 0.0033 17.4 0.4 0.054 13.4 0.3 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family RIO1 PF01163.22 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_1 - 0.013 15.1 0.2 0.023 14.3 0.1 1.4 1 1 0 1 1 1 0 RIO1 family Pox_ser-thr_kin PF05445.11 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_1 - 0.035 13.1 0.2 0.055 12.4 0.2 1.4 1 1 0 1 1 1 0 Poxvirus serine/threonine protein kinase DUF202 PF02656.15 NODE_37445_length_569_cov_45.466292_g30199_i0reverse_frame_1 - 0.1 13.0 1.8 0.24 11.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF202) Phage_holin_1 PF04531.13 NODE_37437_length_569_cov_84.945693_g30191_i0reverse_frame_1 - 0.13 12.8 0.0 0.23 12.0 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage holin Zn_Tnp_IS91 PF14319.6 NODE_37437_length_569_cov_84.945693_g30191_i0forward_frame_1 - 1.1 9.3 10.3 0.064 13.3 4.2 2.0 2 1 0 2 2 2 0 Transposase zinc-binding domain vMSA PF00695.19 NODE_37427_length_569_cov_125.224719_g19526_i1reverse_frame_1 - 0.48 9.5 7.3 1 8.4 7.3 1.6 1 1 0 1 1 1 0 Major surface antigen from hepadnavirus NIF PF03031.18 NODE_37424_length_569_cov_151.786517_g30179_i0reverse_frame_1 - 1.1e-25 90.2 0.0 1.4e-25 89.9 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Hydrolase PF00702.26 NODE_37424_length_569_cov_151.786517_g30179_i0reverse_frame_1 - 0.05 13.9 0.0 0.08 13.2 0.0 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase HAD PF12710.7 NODE_37424_length_569_cov_151.786517_g30179_i0reverse_frame_1 - 0.065 13.6 0.0 0.096 13.1 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase DUF3367 PF11847.8 NODE_37409_length_569_cov_345.880150_g30164_i0forward_frame_1 - 0.12 10.3 0.8 0.16 9.8 0.8 1.1 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase DUF3367 PF11847.8 NODE_37405_length_569_cov_376.382022_g30160_i0reverse_frame_1 - 0.12 10.2 0.8 0.16 9.8 0.8 1.1 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase Tim17 PF02466.19 NODE_37404_length_569_cov_614.146067_g24485_i1forward_frame_1 - 8.7e-09 35.8 0.8 1.4e-08 35.0 0.8 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family TPR_6 PF13174.6 NODE_37404_length_569_cov_614.146067_g24485_i1forward_frame_1 - 0.12 13.1 0.0 0.37 11.5 0.0 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat SNARE_assoc PF09335.11 NODE_37404_length_569_cov_614.146067_g24485_i1forward_frame_1 - 0.12 12.8 4.2 0.076 13.5 1.0 2.1 1 1 1 2 2 2 0 SNARE associated Golgi protein Mito_carr PF00153.27 NODE_37401_length_569_cov_1096.149813_g12985_i2reverse_frame_1 - 8.5e-32 109.0 0.1 2.5e-20 72.2 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks107.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks107.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks107.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks107.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cass2 PF14526.6 NODE_37396_length_569_cov_17421.814607_g30155_i0forward_frame_1 - 0.069 13.3 0.1 0.1 12.8 0.1 1.3 1 0 0 1 1 1 0 Integron-associated effector binding protein MFS_1 PF07690.16 NODE_37393_length_570_cov_2.923364_g30152_i0reverse_frame_1 - 0.00076 18.5 3.7 0.00094 18.2 3.7 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily TTL PF03133.15 NODE_37391_length_570_cov_3.373832_g30150_i0forward_frame_1 - 5.7e-21 74.9 0.2 1.4e-20 73.6 0.0 1.6 1 1 1 2 2 2 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_37391_length_570_cov_3.373832_g30150_i0forward_frame_1 - 6.3e-07 28.9 0.5 7.2e-06 25.4 0.0 2.2 2 1 1 3 3 3 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_37391_length_570_cov_3.373832_g30150_i0forward_frame_1 - 0.0038 16.5 0.0 0.0063 15.8 0.0 1.3 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp PMBR PF09373.10 NODE_37386_length_570_cov_29.654206_g6793_i1reverse_frame_1 - 0.1 12.8 2.3 55 4.2 0.1 3.9 3 1 1 4 4 4 0 Pseudomurein-binding repeat Shisa PF13908.6 NODE_37379_length_570_cov_80.414953_g30140_i0reverse_frame_1 - 0.00044 20.5 0.2 0.00068 19.9 0.2 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF3149 PF11346.8 NODE_37345_length_570_cov_1076.779439_g30109_i0reverse_frame_1 - 0.0042 16.7 0.2 0.01 15.4 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3149) Glyco_transf_9 PF01075.17 NODE_37342_length_571_cov_2.518657_g30107_i0forward_frame_2 - 1.1e-29 103.5 0.0 1.3e-29 103.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Sterol_MT_C PF08498.10 NODE_37326_length_571_cov_94.125000_g30091_i0forward_frame_2 - 0.14 12.5 0.1 0.35 11.2 0.1 1.7 1 0 0 1 1 1 0 Sterol methyltransferase C-terminal RNase_T PF00929.24 NODE_37304_length_571_cov_222.417910_g30072_i0reverse_frame_2 - 6.8e-26 91.8 0.0 8.7e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 NODE_37304_length_571_cov_222.417910_g30072_i0reverse_frame_2 - 3.6e-06 27.1 0.1 5e-06 26.6 0.1 1.1 1 0 0 1 1 1 1 3' exoribonuclease, RNase T-like ISP3_C PF18045.1 NODE_37304_length_571_cov_222.417910_g30072_i0forward_frame_2 - 0.064 13.1 0.0 0.091 12.6 0.0 1.3 1 0 0 1 1 1 0 ISP3 C-terminal Prefoldin PF02996.17 NODE_37296_length_571_cov_483.067164_g30065_i0forward_frame_2 - 0.17 11.8 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit DUF655 PF04919.12 NODE_37282_length_572_cov_32.361266_g30051_i0reverse_frame_3 - 0.42 10.5 10.8 0.57 10.1 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF655) RNA_pol_Rpc82 PF05645.13 NODE_37282_length_572_cov_32.361266_g30051_i0reverse_frame_2 - 2.3 7.9 9.3 0.76 9.5 3.5 2.0 1 1 1 2 2 2 0 RNA polymerase III subunit RPC82 Vfa1 PF08432.10 NODE_37281_length_572_cov_36.901304_g30050_i0reverse_frame_3 - 0.012 15.9 6.1 0.017 15.5 6.1 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 AP3D1 PF06375.11 NODE_37281_length_572_cov_36.901304_g30050_i0reverse_frame_3 - 0.039 14.2 9.1 0.053 13.8 9.1 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 PPL5 PF18168.1 NODE_37281_length_572_cov_36.901304_g30050_i0reverse_frame_3 - 0.05 12.9 2.8 0.065 12.5 2.8 1.1 1 0 0 1 1 1 0 Prim-pol family 5 DUF4641 PF15483.6 NODE_37281_length_572_cov_36.901304_g30050_i0reverse_frame_3 - 0.11 11.6 4.3 0.15 11.2 4.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4641) TFIIF_alpha PF05793.12 NODE_37281_length_572_cov_36.901304_g30050_i0reverse_frame_3 - 2.9 6.4 13.8 3.6 6.1 13.8 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) p47_phox_C PF08944.11 NODE_37276_length_572_cov_87.059590_g30045_i0forward_frame_3 - 1.7 8.2 6.0 6.9 6.2 0.1 3.7 4 0 0 4 4 4 0 NADPH oxidase subunit p47Phox, C terminal domain fn3 PF00041.21 NODE_37269_length_572_cov_102.370577_g30038_i0forward_frame_2 - 1e-12 48.2 1.9 6.1e-06 26.5 0.2 2.5 2 0 0 2 2 2 2 Fibronectin type III domain YjbH PF06082.11 NODE_37258_length_572_cov_233.865922_g30028_i0forward_frame_3 - 0.18 10.6 1.4 0.18 10.6 1.4 1.1 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH RR_TM4-6 PF06459.12 NODE_37258_length_572_cov_233.865922_g30028_i0forward_frame_3 - 0.45 10.3 15.1 0.55 10.0 15.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 SPX PF03105.19 NODE_37258_length_572_cov_233.865922_g30028_i0forward_frame_3 - 0.82 9.5 15.3 0.99 9.3 15.3 1.1 1 0 0 1 1 1 0 SPX domain Mem_trans PF03547.18 NODE_37258_length_572_cov_233.865922_g30028_i0forward_frame_3 - 3 6.1 4.1 3.2 6.1 4.1 1.2 1 0 0 1 1 1 0 Membrane transport protein Ras PF00071.22 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 8.6e-28 97.0 0.0 9.8e-28 96.8 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 1.9e-14 53.9 0.0 2.7e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 2e-10 40.4 0.0 2.2e-10 40.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 0.00087 18.9 0.0 0.0046 16.5 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 0.0012 18.2 0.0 0.0016 17.9 0.0 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 0.0073 16.4 0.0 0.011 15.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase PAP_fibrillin PF04755.12 NODE_37250_length_572_cov_540.657356_g30020_i0reverse_frame_3 - 0.0025 17.8 0.0 0.0041 17.1 0.0 1.3 1 0 0 1 1 1 1 PAP_fibrillin Isochorismatase PF00857.20 NODE_37240_length_573_cov_2.758364_g30011_i0reverse_frame_2 - 1.1e-32 113.6 0.0 1.3e-32 113.4 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family DUF1450 PF07293.11 NODE_37239_length_573_cov_2.786245_g30010_i0reverse_frame_2 - 0.0035 17.1 0.8 0.0071 16.1 0.8 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1450) UBA_4 PF14555.6 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_3 - 0.034 13.9 0.0 0.057 13.2 0.0 1.3 1 0 0 1 1 1 0 UBA-like domain Phage_holin_2_1 PF04971.12 NODE_37236_length_573_cov_3.068773_g30007_i0forward_frame_3 - 1.7e-31 108.0 0.2 2.5e-31 107.5 0.2 1.2 1 0 0 1 1 1 1 Bacteriophage P21 holin S Phage_holin_2_3 PF16080.5 NODE_37236_length_573_cov_3.068773_g30007_i0forward_frame_3 - 0.0022 17.7 0.1 0.0038 17.0 0.1 1.4 1 0 0 1 1 1 1 Bacteriophage holin family HP1 Ribosomal_S14 PF00253.21 NODE_37226_length_573_cov_78.737918_g29998_i0reverse_frame_2 - 0.16 11.8 3.6 2.1 8.2 1.5 2.5 2 0 0 2 2 2 0 Ribosomal protein S14p/S29e MyTH4 PF00784.17 NODE_37207_length_573_cov_181.868030_g29980_i0reverse_frame_2 - 0.00075 20.0 2.6 0.37 11.3 0.2 2.3 1 1 1 2 2 2 2 MyTH4 domain DUF3864 PF12980.7 NODE_37207_length_573_cov_181.868030_g29980_i0reverse_frame_2 - 0.18 12.1 2.3 3.5 8.0 0.1 2.5 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3864) DUF2070 PF09843.9 NODE_37207_length_573_cov_181.868030_g29980_i0reverse_frame_2 - 5 5.3 10.4 4.5 5.4 10.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) INSIG PF07281.12 NODE_37203_length_573_cov_194.618959_g29976_i0reverse_frame_3 - 0.17 11.5 1.1 5.7 6.5 0.3 2.3 1 1 1 2 2 2 0 Insulin-induced protein (INSIG) RCC1_2 PF13540.6 NODE_37203_length_573_cov_194.618959_g29976_i0reverse_frame_2 - 4.7e-09 35.8 8.5 0.16 11.8 0.3 4.4 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF3502 PF12010.8 NODE_37203_length_573_cov_194.618959_g29976_i0reverse_frame_2 - 0.19 12.4 1.1 85 3.8 0.0 3.6 3 1 1 4 4 4 0 Domain of unknown function (DUF3502) Carb_anhydrase PF00194.21 NODE_37200_length_573_cov_228.704461_g29973_i0reverse_frame_2 - 9.5e-25 87.6 0.0 1.4e-24 87.0 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DUF4710 PF15828.5 NODE_37197_length_573_cov_397.565056_g29971_i0reverse_frame_2 - 5 7.3 13.0 0.15 12.2 1.4 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4710) ASFV_L11L PF05293.11 NODE_37197_length_573_cov_397.565056_g29971_i0forward_frame_2 - 3.6 8.0 12.6 3.7 7.9 10.9 1.9 1 1 0 1 1 1 0 African swine fever virus (ASFV) L11L protein ATP-synt_B PF00430.18 ORF98797 - 3.7e-13 49.7 8.2 4.8e-13 49.3 8.2 1.1 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) IFT57 PF10498.9 ORF98797 - 0.0007 18.7 4.8 0.001 18.1 4.8 1.3 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Cystatin PF00031.21 ORF98797 - 0.0012 19.1 3.2 0.0021 18.3 2.7 1.7 1 1 1 2 2 2 1 Cystatin domain ApbA_C PF08546.11 ORF98797 - 0.0091 16.2 1.3 0.013 15.6 1.3 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal AAA_13 PF13166.6 ORF98797 - 0.011 14.4 5.9 0.013 14.2 5.9 1.1 1 0 0 1 1 1 0 AAA domain ARGLU PF15346.6 ORF98797 - 0.023 14.6 7.6 0.031 14.2 7.6 1.1 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 DUF842 PF05811.13 ORF98797 - 0.025 14.3 2.8 0.035 13.8 2.8 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) HAUS6_N PF14661.6 ORF98797 - 0.053 13.1 3.3 0.067 12.8 3.3 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Allexi_40kDa PF05549.11 ORF98797 - 0.096 12.2 2.2 0.12 11.8 2.2 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein T2SSM PF04612.12 ORF98797 - 0.12 12.5 6.0 0.8 9.7 3.0 2.1 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein M AI-2E_transport PF01594.16 ORF98797 - 0.13 11.4 0.0 0.17 11.0 0.0 1.3 1 0 0 1 1 1 0 AI-2E family transporter Seryl_tRNA_N PF02403.22 ORF98797 - 0.14 12.4 12.5 0.083 13.1 9.5 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain LMBR1 PF04791.16 ORF98797 - 0.18 10.7 1.4 0.21 10.5 1.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF763 PF05559.11 ORF98797 - 0.23 10.6 2.7 0.29 10.3 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF763) Fib_alpha PF08702.10 ORF98797 - 0.31 11.2 8.0 0.41 10.8 7.1 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_S46 PF10459.9 ORF98797 - 0.33 9.5 9.8 0.39 9.3 9.8 1.0 1 0 0 1 1 1 0 Peptidase S46 V-ATPase_G_2 PF16999.5 ORF98797 - 0.96 9.9 18.2 1.2 9.6 15.9 1.9 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit Jnk-SapK_ap_N PF09744.9 ORF98797 - 1.1 9.4 10.3 1.4 9.1 10.3 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 PdaC PF13739.6 ORF98797 - 2.3 9.3 9.6 2.7 9.0 4.2 2.3 1 1 1 2 2 2 0 Deacetylase PdaC ZYG-11_interact PF05884.12 ORF98797 - 2.7 7.3 4.4 3.5 6.9 4.4 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 TMPIT PF07851.13 ORF98797 - 6.1 6.0 7.0 7.3 5.7 7.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein YtxH PF12732.7 ORF98797 - 7.7 7.1 10.1 27 5.4 10.0 2.1 1 1 0 1 1 1 0 YtxH-like protein YscW PF09619.10 ORF97203 - 9.2e-41 138.5 0.2 1.4e-40 138.0 0.2 1.3 1 0 0 1 1 1 1 Type III secretion system lipoprotein chaperone (YscW) Ion_trans PF00520.31 ORF96659 - 1.1e-06 28.1 2.8 1.2e-06 27.9 2.8 1.2 1 0 0 1 1 1 1 Ion transport protein HCV_NS2 PF01538.18 ORF96659 - 0.00048 19.8 0.1 0.00097 18.8 0.0 1.5 1 1 0 1 1 1 1 Hepatitis C virus non-structural protein NS2 LRR_4 PF12799.7 ORF95762 - 4.6e-19 68.2 48.3 3e-07 30.6 3.6 4.2 1 1 5 6 6 6 6 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF95762 - 1.6e-08 34.2 28.1 0.00048 19.8 7.6 4.0 3 1 0 4 4 4 3 Leucine rich repeat LRR_9 PF14580.6 ORF95762 - 1.6e-07 31.0 6.0 0.00088 18.8 2.1 2.1 1 1 1 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 ORF95762 - 6.3e-05 22.7 13.8 0.063 13.4 0.7 4.9 4 0 0 4 4 4 2 Leucine Rich repeat LRR_5 PF13306.6 ORF95762 - 0.019 14.9 6.0 0.066 13.2 4.9 2.1 1 1 1 2 2 2 0 BspA type Leucine rich repeat region (6 copies) SecA_PP_bind PF01043.20 ORF95762 - 0.19 12.4 0.7 0.42 11.3 0.6 1.8 1 1 0 1 1 1 0 SecA preprotein cross-linking domain LRR_1 PF00560.33 ORF95762 - 0.94 10.3 17.5 14 6.7 0.2 5.5 5 1 0 5 5 5 0 Leucine Rich Repeat Ribonuc_red_2_N PF08471.10 ORF94554 - 0.04 14.1 0.2 0.081 13.1 0.0 1.6 2 0 0 2 2 2 0 Class II vitamin B12-dependent ribonucleotide reductase Kinase-like PF14531.6 ORF94068 - 0.01 15.2 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Glyco_hydro_16 PF00722.21 ORF91153 - 2.2e-05 24.0 0.1 4.3e-05 23.1 0.1 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 Sperm_act_pep PF08250.11 ORF91153 - 3.9 8.2 8.2 0.39 11.3 3.4 1.9 2 0 0 2 2 2 0 Sperm-activating peptides IL12p40_C PF10420.9 ORF90462 - 0.31 11.6 4.4 0.78 10.3 4.4 1.9 1 1 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus DUF2613 PF11021.8 ORF90462 - 0.91 9.7 0.0 0.91 9.7 0.0 2.9 3 1 1 4 4 4 0 Protein of unknown function (DUF2613) YadA_anchor PF03895.15 ORF90462 - 4.9 7.3 7.4 0.36 11.0 0.6 2.5 1 1 2 3 3 3 0 YadA-like membrane anchor domain PAP1 PF08601.10 ORF90462 - 5.1 6.7 16.7 6.1 6.5 16.7 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 TMF_DNA_bd PF12329.8 ORF90206 - 0.0071 16.3 5.6 0.0071 16.3 5.6 2.3 1 1 1 2 2 2 1 TATA element modulatory factor 1 DNA binding PT PF04886.12 ORF90206 - 0.0084 15.6 1.7 0.013 15.0 1.7 1.3 1 0 0 1 1 1 1 PT repeat Fib_alpha PF08702.10 ORF90206 - 0.077 13.2 11.9 0.1 12.8 11.9 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family LMBR1 PF04791.16 ORF90206 - 1.1 8.0 1.9 1.1 8.0 1.9 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2333 PF10095.9 ORF90206 - 1.5 7.7 7.0 0.31 10.0 3.9 1.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2333) PHBC_N PF12551.8 ORF87943 - 0.2 11.4 9.2 3.7 7.4 0.0 3.5 3 0 0 3 3 3 0 Poly-beta-hydroxybutyrate polymerase N terminal Cupin_8 PF13621.6 ORF87938 - 1.6e-28 100.1 0.0 1.9e-28 99.9 0.0 1.0 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF87938 - 3.6e-12 46.4 0.0 4.8e-10 39.4 0.1 2.1 2 0 0 2 2 2 2 Cupin superfamily protein JmjC PF02373.22 ORF87938 - 2.5e-05 24.7 0.0 8.4e-05 23.0 0.0 1.9 1 1 0 1 1 1 1 JmjC domain, hydroxylase Cupin_2 PF07883.11 ORF87938 - 0.0017 18.0 0.0 0.0061 16.2 0.0 1.9 2 0 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 ORF87938 - 0.024 14.2 0.0 0.032 13.9 0.0 1.2 1 0 0 1 1 1 0 Cupin DUF2917 PF11142.8 ORF87938 - 0.085 12.3 1.1 5.5 6.5 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2917) FMN_dh PF01070.18 ORF87031 - 2.4e-71 240.6 0.1 2.9e-71 240.3 0.1 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 ORF87031 - 1.1e-09 37.8 1.3 2.5e-07 30.0 0.3 2.7 1 1 1 2 2 2 2 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 ORF87031 - 1.4e-06 28.0 0.0 1.7e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase Glu_synthase PF01645.17 ORF87031 - 2.5e-06 26.9 0.1 1.4e-05 24.4 0.0 1.9 2 0 0 2 2 2 1 Conserved region in glutamate synthase His_biosynth PF00977.21 ORF87031 - 2.3e-05 24.0 0.1 0.0061 16.1 0.0 2.2 1 1 1 2 2 2 2 Histidine biosynthesis protein DHO_dh PF01180.21 ORF87031 - 5.1e-05 22.6 0.2 0.012 14.9 0.1 2.1 1 1 1 2 2 2 2 Dihydroorotate dehydrogenase ThiG PF05690.14 ORF87031 - 0.00021 20.7 0.1 0.078 12.3 0.0 2.2 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 ORF87031 - 0.0014 17.7 0.1 0.13 11.3 0.0 2.1 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.12 ORF87031 - 0.014 14.9 0.0 1.3 8.5 0.0 2.3 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator DHDPS PF00701.22 ORF87031 - 0.12 11.1 0.0 0.17 10.6 0.0 1.2 1 0 0 1 1 1 0 Dihydrodipicolinate synthetase family Sulfotransfer_2 PF03567.14 ORF85766 - 8.9e-05 22.5 1.6 0.00012 22.0 1.6 1.5 1 1 0 1 1 1 1 Sulfotransferase family Ni_hydr_CYTB PF01292.20 ORF82804 - 0.062 12.9 4.9 0.62 9.6 5.7 1.8 1 1 1 2 2 2 0 Prokaryotic cytochrome b561 MFS_Mycoplasma PF07672.13 ORF82804 - 0.12 11.7 2.6 0.3 10.3 0.3 2.0 1 1 1 2 2 2 0 Mycoplasma MFS transporter DUF202 PF02656.15 ORF82804 - 0.63 10.5 12.1 0.36 11.3 1.6 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF202) MerC PF03203.14 ORF82804 - 0.78 10.2 8.5 2 8.9 7.9 1.8 1 1 1 2 2 2 0 MerC mercury resistance protein Sina PF03145.16 ORF80610 - 0.00036 20.6 14.0 0.0014 18.6 6.7 2.1 1 1 1 2 2 2 2 Seven in absentia protein family zf-TRAF PF02176.18 ORF80610 - 0.00039 21.1 21.1 0.0089 16.7 9.7 3.1 1 1 2 3 3 3 2 TRAF-type zinc finger DM PF00751.18 ORF80610 - 0.85 9.6 15.9 0.63 10.0 5.6 2.7 1 1 1 2 2 2 0 DM DNA binding domain WGR PF05406.15 ORF74208 - 1.2e-07 31.7 1.3 2.2e-07 30.8 1.3 1.4 1 0 0 1 1 1 1 WGR domain DUF4413 PF14372.6 ORF74208 - 0.12 12.7 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4413) RDD PF06271.12 ORF69441 - 0.34 11.1 9.4 2.2 8.5 9.6 2.1 1 1 0 1 1 1 0 RDD family TrbC PF04956.13 ORF69441 - 0.76 10.0 7.3 0.66 10.2 2.8 2.5 2 1 0 2 2 2 0 TrbC/VIRB2 family DUF2070 PF09843.9 ORF69441 - 5 5.3 7.1 6.1 5.0 7.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Ion_trans PF00520.31 ORF69312 - 1.1e-06 28.1 2.8 1.2e-06 27.9 2.8 1.2 1 0 0 1 1 1 1 Ion transport protein HCV_NS2 PF01538.18 ORF69312 - 0.00048 19.8 0.1 0.00097 18.8 0.0 1.5 1 1 0 1 1 1 1 Hepatitis C virus non-structural protein NS2 PUB PF09409.10 ORF69157 - 1.6e-18 66.4 0.8 2.6e-18 65.7 0.8 1.5 1 1 0 1 1 1 1 PUB domain DUF365 PF04033.12 ORF69157 - 0.79 10.0 5.7 0.48 10.7 2.9 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF365) CDC27 PF09507.10 ORF6837 - 0.15 11.5 3.6 0.19 11.1 3.6 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 DUF676 PF05057.14 ORF66187 - 1.3e-10 41.1 0.1 3.3e-10 39.8 0.0 1.7 2 0 0 2 2 2 1 Putative serine esterase (DUF676) Cyt-b5 PF00173.28 ORF65773 - 8.2e-18 64.3 0.1 1.3e-17 63.7 0.1 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain IHO1 PF15771.5 ORF63370 - 5.7e-05 22.1 14.5 5.8e-05 22.1 14.5 1.0 1 0 0 1 1 1 1 Interactor of HORMAD1 protein 1 PNISR PF15996.5 ORF63370 - 0.0095 16.2 21.5 0.014 15.7 21.5 1.2 1 0 0 1 1 1 1 Arginine/serine-rich protein PNISR Rtf2 PF04641.12 ORF63370 - 0.041 13.3 21.3 0.063 12.6 21.3 1.3 1 0 0 1 1 1 0 Rtf2 RING-finger SRP-alpha_N PF04086.13 ORF63370 - 0.058 13.3 20.0 0.069 13.1 20.0 1.2 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal DUF2207 PF09972.9 ORF63370 - 0.22 10.3 3.4 0.23 10.2 3.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) SAPS PF04499.15 ORF63370 - 0.33 9.7 7.5 0.36 9.6 7.5 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF3987 PF13148.6 ORF63370 - 0.48 9.4 13.8 0.8 8.6 13.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) CDC45 PF02724.14 ORF63370 - 0.7 8.1 13.6 0.79 7.9 13.6 1.1 1 0 0 1 1 1 0 CDC45-like protein U79_P34 PF03064.16 ORF63370 - 0.8 9.0 14.4 1.1 8.6 14.4 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Arb1 PF09692.10 ORF63370 - 0.91 8.6 8.4 0.069 12.3 4.0 1.4 2 0 0 2 2 2 0 Argonaute siRNA chaperone (ARC) complex subunit Arb1 SLC12 PF03522.15 ORF63370 - 1.4 7.9 12.3 1.8 7.5 12.3 1.1 1 0 0 1 1 1 0 Solute carrier family 12 SURF2 PF05477.11 ORF63370 - 1.7 8.3 20.1 2.3 7.9 20.1 1.1 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) AP3D1 PF06375.11 ORF63370 - 1.8 8.8 33.9 0.11 12.7 27.1 2.1 1 1 1 2 2 2 0 AP-3 complex subunit delta-1 FemAB PF02388.16 ORF63370 - 2.5 6.9 11.8 0.18 10.6 7.3 1.3 2 0 0 2 2 2 0 FemAB family Neur_chan_memb PF02932.16 ORF63370 - 2.6 8.0 8.2 3.5 7.6 8.2 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region GNAT_acetyltr_2 PF13718.6 ORF63370 - 4 6.8 6.8 0.55 9.6 2.3 1.7 2 0 0 2 2 2 0 GNAT acetyltransferase 2 Cellulose_synt PF03552.14 ORF63370 - 4.4 5.7 5.0 6.3 5.1 5.0 1.2 1 0 0 1 1 1 0 Cellulose synthase PIEZO PF15917.5 ORF63370 - 6.8 6.1 15.1 9.4 5.6 15.1 1.2 1 0 0 1 1 1 0 Piezo Presenilin PF01080.17 ORF63370 - 7.3 5.2 14.5 9.4 4.9 14.5 1.1 1 0 0 1 1 1 0 Presenilin HTH_Tnp_Tc5 PF03221.16 ORF63365 - 1.6e-15 56.8 0.2 3e-15 56.0 0.2 1.5 1 0 0 1 1 1 1 Tc5 transposase DNA-binding domain SPACA7 PF15307.6 ORF63365 - 0.058 13.7 3.9 0.78 10.0 0.6 2.2 1 1 1 2 2 2 0 Sperm acrosome-associated protein 7 DUF5301 PF17225.3 ORF62824 - 1.3 9.5 9.2 0.18 12.3 4.3 2.1 2 1 1 3 3 3 0 Domain of unknown function (DUF5300) Transketolase_C PF02780.20 ORF61498 - 0.082 12.8 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Transketolase, C-terminal domain DUF726 PF05277.12 ORF59563 - 2.5e-09 36.5 0.0 2.5e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF726) UPF0565 PF10561.9 ORF59563 - 0.04 13.1 0.0 0.046 12.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 adh_short_C2 PF13561.6 ORF58853 - 2.9e-40 138.3 0.0 3.2e-40 138.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF58853 - 4.5e-30 104.6 0.0 5.8e-30 104.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase H2TH PF06831.14 ORF54150 - 8.3e-19 67.4 0.0 1.2e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain FbpA PF05833.11 ORF54150 - 0.042 12.6 0.0 0.054 12.2 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) CobW_C PF07683.14 ORF53473 - 4.4e-23 81.0 0.0 6.7e-23 80.4 0.0 1.3 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain GABP-alpha PF11620.8 ORF51765 - 0.066 13.4 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 GA-binding protein alpha chain DUF2244 PF10003.9 ORF5022 - 0.2 11.3 0.1 0.28 10.9 0.1 1.2 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) Vpu PF00558.19 ORF5022 - 0.92 9.3 2.5 1.9 8.3 2.5 1.5 1 0 0 1 1 1 0 Vpu protein H2TH PF06831.14 ORF47409 - 8.3e-19 67.4 0.0 1.2e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain FbpA PF05833.11 ORF47409 - 0.042 12.6 0.0 0.054 12.2 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) SAICAR_synt PF01259.18 ORF4725 - 8.2e-47 159.9 0.0 9.1e-47 159.8 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase YhfT PF10797.9 ORF46922 - 1.6e-74 251.4 13.0 1.8e-74 251.3 13.0 1.0 1 0 0 1 1 1 1 Protein of unknown function YvrJ PF12841.7 ORF46922 - 0.038 13.5 0.1 0.096 12.2 0.1 1.7 1 0 0 1 1 1 0 YvrJ protein family Bac_rhodopsin PF01036.18 ORF46922 - 0.2 11.2 12.5 1.4 8.5 2.1 2.1 2 0 0 2 2 2 0 Bacteriorhodopsin-like protein DASH_Dam1 PF08653.10 ORF45498 - 1.7 8.5 4.8 5.4 6.9 0.5 3.2 3 0 0 3 3 3 0 DASH complex subunit Dam1 ABC_tran_CTD PF16326.5 ORF45498 - 3 8.2 7.1 11 6.4 0.4 2.9 3 0 0 3 3 3 0 ABC transporter C-terminal domain DUF5611 PF18446.1 ORF45498 - 6.3 7.7 10.4 16 6.4 1.5 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF5611) AAA_21 PF13304.6 ORF41250 - 7.3e-05 22.7 0.0 0.00011 22.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Cdc6_C PF09079.11 ORF41250 - 0.0011 18.9 0.0 0.0038 17.2 0.0 1.8 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain TnpW PF14202.6 ORF41250 - 0.13 12.1 0.2 0.36 10.7 0.0 1.7 2 0 0 2 2 2 0 Transposon-encoded protein TnpW DUF2813 PF11398.8 ORF41250 - 0.17 11.1 0.1 0.49 9.6 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) HAD PF12710.7 ORF40918 - 4.8e-06 27.1 0.0 5.2e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF4046 PF13255.6 ORF4088 - 0.28 11.8 2.0 0.34 11.5 0.4 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF4046) Laminin_II PF06009.12 ORF40827 - 0.00094 19.2 4.5 0.00094 19.2 4.5 2.8 1 1 2 3 3 3 1 Laminin Domain II Jnk-SapK_ap_N PF09744.9 ORF40827 - 0.0013 19.0 20.8 0.0013 19.0 20.8 2.7 1 1 1 2 2 2 1 JNK_SAPK-associated protein-1 DUF3450 PF11932.8 ORF40827 - 0.0025 17.2 10.7 0.0025 17.2 10.7 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) DUF4200 PF13863.6 ORF40827 - 0.0049 17.3 22.2 0.0049 17.3 22.2 2.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4200) Taxilin PF09728.9 ORF40827 - 0.0056 15.9 40.4 0.026 13.7 40.4 1.8 1 1 0 1 1 1 1 Myosin-like coiled-coil protein Fez1 PF06818.15 ORF40827 - 0.0068 16.9 19.6 0.0068 16.9 19.6 2.4 1 1 1 2 2 2 1 Fez1 Nup54 PF13874.6 ORF40827 - 0.0091 16.1 20.7 0.039 14.0 7.2 2.2 1 1 1 2 2 2 1 Nucleoporin complex subunit 54 DUF1664 PF07889.12 ORF40827 - 0.0098 15.9 2.3 0.0098 15.9 2.3 2.7 1 1 2 3 3 3 2 Protein of unknown function (DUF1664) DUF4472 PF14739.6 ORF40827 - 0.013 16.2 2.1 0.013 16.2 2.1 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4472) FlaC_arch PF05377.11 ORF40827 - 0.015 15.6 0.4 0.015 15.6 0.4 4.5 1 1 3 4 4 4 0 Flagella accessory protein C (FlaC) THOC7 PF05615.13 ORF40827 - 0.02 15.2 28.1 0.17 12.1 17.8 2.5 1 1 1 2 2 2 0 Tho complex subunit 7 Syntaxin-6_N PF09177.11 ORF40827 - 0.03 14.9 4.9 0.03 14.9 4.9 3.1 1 1 1 2 2 2 0 Syntaxin 6, N-terminal TPR_MLP1_2 PF07926.12 ORF40827 - 0.046 13.8 38.0 0.019 15.0 16.8 3.0 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein APG6_N PF17675.1 ORF40827 - 0.066 13.7 40.7 1.9 9.0 24.9 3.0 1 1 1 2 2 2 0 Apg6 coiled-coil region MAD PF05557.13 ORF40827 - 0.1 11.0 36.9 0.12 10.8 36.9 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein Prominin PF05478.11 ORF40827 - 0.11 10.4 28.0 0.13 10.2 28.0 1.0 1 0 0 1 1 1 0 Prominin ATG16 PF08614.11 ORF40827 - 0.12 12.5 32.9 0.41 10.9 12.3 2.5 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Filament PF00038.21 ORF40827 - 0.19 11.2 31.4 0.14 11.8 19.2 2.2 1 1 1 2 2 2 0 Intermediate filament protein Spc7 PF08317.11 ORF40827 - 0.23 10.3 35.9 0.99 8.2 27.6 2.5 1 1 1 2 2 2 0 Spc7 kinetochore protein ADIP PF11559.8 ORF40827 - 0.27 11.3 39.0 0.04 14.0 5.2 3.2 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding TSC22 PF01166.18 ORF40827 - 0.28 11.5 0.1 0.28 11.5 0.1 4.9 2 2 4 6 6 5 0 TSC-22/dip/bun family TMF_TATA_bd PF12325.8 ORF40827 - 0.39 10.9 30.0 0.24 11.6 7.6 3.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Syntaxin PF00804.25 ORF40827 - 0.71 9.5 23.4 0.55 9.9 15.5 2.2 1 1 1 2 2 2 0 Syntaxin DUF948 PF06103.11 ORF40827 - 0.75 10.1 8.0 3.1 8.1 0.2 2.8 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Spectrin PF00435.21 ORF40827 - 0.77 10.3 28.3 0.25 11.8 6.9 2.5 1 1 2 3 3 3 0 Spectrin repeat IFT57 PF10498.9 ORF40827 - 0.79 8.6 33.7 0.49 9.3 6.1 2.2 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 CENP-H PF05837.12 ORF40827 - 1.1 9.7 29.5 0.98 9.9 3.5 3.2 1 1 2 3 3 3 0 Centromere protein H (CENP-H) GAS PF13851.6 ORF40827 - 1.2 8.4 42.1 1.9 7.8 24.4 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding KASH_CCD PF14662.6 ORF40827 - 1.2 8.9 37.2 0.3 10.9 8.4 2.3 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH HOOK PF05622.12 ORF40827 - 1.5 6.9 37.0 1.1 7.3 28.5 2.0 1 1 1 2 2 2 0 HOOK protein GrpE PF01025.19 ORF40827 - 1.5 8.4 38.3 1.4 8.6 8.1 4.0 1 1 3 4 4 4 0 GrpE DUF724 PF05266.14 ORF40827 - 1.9 8.2 30.1 0.6 9.9 10.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Golgin_A5 PF09787.9 ORF40827 - 2.5 7.5 34.8 3.1 7.2 24.7 2.0 1 1 1 2 2 2 0 Golgin subfamily A member 5 DUF2730 PF10805.8 ORF40827 - 2.5 8.2 13.2 3.5 7.8 5.5 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Exonuc_VII_L PF02601.15 ORF40827 - 2.8 7.4 24.6 9.5 5.7 24.6 1.8 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF3584 PF12128.8 ORF40827 - 3.4 5.1 31.4 12 3.3 31.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) HAP1_N PF04849.13 ORF40827 - 3.7 6.7 35.5 24 4.0 35.5 1.9 1 1 0 1 1 1 0 HAP1 N-terminal conserved region Tropomyosin_1 PF12718.7 ORF40827 - 4.1 7.6 38.6 6.4 6.9 27.8 2.7 1 1 1 2 2 2 0 Tropomyosin like CREPT PF16566.5 ORF40827 - 4.4 7.5 28.4 0.07 13.3 10.0 2.7 1 1 2 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour JAKMIP_CC3 PF16034.5 ORF40827 - 4.6 7.1 33.1 0.77 9.7 9.2 3.8 1 1 3 4 4 4 0 JAKMIP CC3 domain HAUS-augmin3 PF14932.6 ORF40827 - 4.8 6.7 32.6 1.7 8.2 16.9 2.1 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Tup_N PF08581.10 ORF40827 - 5.9 7.3 33.1 0.16 12.3 5.3 4.4 1 1 3 4 4 4 0 Tup N-terminal Prefoldin_2 PF01920.20 ORF40827 - 6 6.9 38.0 1.6 8.7 2.8 4.3 1 1 3 4 4 4 0 Prefoldin subunit DUF4446 PF14584.6 ORF40827 - 7.2 6.6 24.8 0.29 11.1 3.2 3.4 1 1 3 4 4 4 0 Protein of unknown function (DUF4446) Sec34 PF04136.15 ORF40827 - 7.9 6.4 29.7 0.27 11.1 7.0 3.6 1 1 3 4 4 4 0 Sec34-like family JIP_LZII PF16471.5 ORF40827 - 9.6 6.5 30.8 9.6 6.5 4.6 4.0 2 2 0 3 3 3 0 JNK-interacting protein leucine zipper II Ala_racemase_N PF01168.20 ORF38702 - 0.038 13.6 0.0 0.053 13.2 0.0 1.2 1 0 0 1 1 1 0 Alanine racemase, N-terminal domain DUF349 PF03993.12 ORF38374 - 0.093 13.0 2.6 0.1 12.9 1.0 2.0 2 1 0 2 2 2 0 Domain of Unknown Function (DUF349) PfkB PF00294.24 ORF36789 - 9.6e-34 117.1 0.4 1.1e-33 116.8 0.4 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF36789 - 3.8e-13 49.4 0.1 5.2e-13 49.0 0.1 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase HTH_29 PF13551.6 ORF36789 - 0.013 15.5 0.0 0.033 14.2 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix Orbi_VP6 PF01516.16 ORF35147 - 0.094 12.2 0.1 0.14 11.7 0.1 1.2 1 0 0 1 1 1 0 Orbivirus helicase VP6 Fib_alpha PF08702.10 ORF34727 - 1.2 9.4 6.5 0.63 10.2 0.9 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF778 PF05608.12 ORF34621 - 5e-30 105.3 8.2 3.6e-19 69.9 0.1 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF778) DUF2417 PF10329.9 ORF34621 - 0.04 13.4 0.3 0.053 12.9 0.3 1.2 1 0 0 1 1 1 0 Region of unknown function (DUF2417) PFU PF09070.11 ORF34494 - 4.4e-18 65.6 0.0 3e-09 37.1 0.0 2.1 1 1 1 2 2 2 2 PFU (PLAA family ubiquitin binding) UBA PF00627.31 ORF34494 - 6.5e-09 35.5 0.0 1e-08 34.9 0.0 1.4 1 0 0 1 1 1 1 UBA/TS-N domain UBA_4 PF14555.6 ORF34494 - 0.00011 22.0 0.1 0.0002 21.1 0.1 1.5 1 0 0 1 1 1 1 UBA-like domain AFOR_C PF01314.18 ORF34494 - 0.12 11.4 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CUE PF02845.16 ORF34494 - 0.16 11.7 0.0 0.36 10.6 0.0 1.6 1 0 0 1 1 1 0 CUE domain ABA_GPCR PF12430.8 ORF3249 - 0.00044 20.1 2.4 0.0007 19.4 2.4 1.2 1 0 0 1 1 1 1 Abscisic acid G-protein coupled receptor DUF4046 PF13255.6 ORF31784 - 0.28 11.8 2.0 0.34 11.5 0.4 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF4046) ATP-synt_B PF00430.18 ORF30761 - 3.7e-13 49.7 8.2 4.8e-13 49.3 8.2 1.1 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) IFT57 PF10498.9 ORF30761 - 0.0007 18.7 4.8 0.001 18.1 4.8 1.3 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Cystatin PF00031.21 ORF30761 - 0.0012 19.1 3.2 0.0021 18.3 2.7 1.7 1 1 1 2 2 2 1 Cystatin domain ApbA_C PF08546.11 ORF30761 - 0.0091 16.2 1.3 0.013 15.6 1.3 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal AAA_13 PF13166.6 ORF30761 - 0.011 14.4 5.9 0.013 14.2 5.9 1.1 1 0 0 1 1 1 0 AAA domain ARGLU PF15346.6 ORF30761 - 0.023 14.6 7.6 0.031 14.2 7.6 1.1 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 DUF842 PF05811.13 ORF30761 - 0.025 14.3 2.8 0.035 13.8 2.8 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) HAUS6_N PF14661.6 ORF30761 - 0.053 13.1 3.3 0.067 12.8 3.3 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Allexi_40kDa PF05549.11 ORF30761 - 0.096 12.2 2.2 0.12 11.8 2.2 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein T2SSM PF04612.12 ORF30761 - 0.12 12.5 6.0 0.8 9.7 3.0 2.1 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein M AI-2E_transport PF01594.16 ORF30761 - 0.13 11.4 0.0 0.17 11.0 0.0 1.3 1 0 0 1 1 1 0 AI-2E family transporter Seryl_tRNA_N PF02403.22 ORF30761 - 0.14 12.4 12.5 0.083 13.1 9.5 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain LMBR1 PF04791.16 ORF30761 - 0.18 10.7 1.4 0.21 10.5 1.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF763 PF05559.11 ORF30761 - 0.23 10.6 2.7 0.29 10.3 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF763) Fib_alpha PF08702.10 ORF30761 - 0.31 11.2 8.0 0.41 10.8 7.1 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_S46 PF10459.9 ORF30761 - 0.33 9.5 9.8 0.39 9.3 9.8 1.0 1 0 0 1 1 1 0 Peptidase S46 V-ATPase_G_2 PF16999.5 ORF30761 - 0.96 9.9 18.2 1.2 9.6 15.9 1.9 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit Jnk-SapK_ap_N PF09744.9 ORF30761 - 1.1 9.4 10.3 1.4 9.1 10.3 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 PdaC PF13739.6 ORF30761 - 2.3 9.3 9.6 2.7 9.0 4.2 2.3 1 1 1 2 2 2 0 Deacetylase PdaC ZYG-11_interact PF05884.12 ORF30761 - 2.7 7.3 4.4 3.5 6.9 4.4 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 TMPIT PF07851.13 ORF30761 - 6.1 6.0 7.0 7.3 5.7 7.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein YtxH PF12732.7 ORF30761 - 7.7 7.1 10.1 27 5.4 10.0 2.1 1 1 0 1 1 1 0 YtxH-like protein Rubredoxin_2 PF18073.1 ORF30414 - 1.1e-12 47.4 6.1 1.7e-12 46.8 6.1 1.3 1 0 0 1 1 1 1 Rubredoxin metal binding domain TPR_8 PF13181.6 ORF30414 - 2.4e-06 27.3 0.0 0.013 15.6 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF30414 - 2.3e-05 24.8 0.9 0.0008 19.9 0.0 2.6 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF30414 - 0.00021 21.8 2.4 0.033 15.0 0.0 3.7 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_20 PF14561.6 ORF30414 - 0.00021 21.6 1.6 0.12 12.7 0.0 2.3 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF30414 - 0.00054 19.9 0.0 0.0095 16.0 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF30414 - 0.00059 19.7 0.5 0.12 12.4 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF30414 - 0.00096 19.6 1.5 0.075 13.7 0.0 3.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF30414 - 0.00097 18.9 0.0 0.016 15.0 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF30414 - 0.0014 18.3 0.0 0.003 17.2 0.0 1.6 1 0 0 1 1 1 1 TPR repeat TPR_12 PF13424.6 ORF30414 - 0.0024 18.1 0.1 0.0071 16.6 0.1 1.9 1 1 0 1 1 1 1 Tetratricopeptide repeat SPG48 PF14764.6 ORF30414 - 0.016 15.6 0.0 0.03 14.8 0.0 1.5 1 0 0 1 1 1 0 AP-5 complex subunit, vesicle trafficking TBCA PF02970.16 ORF30414 - 0.058 13.7 1.9 0.25 11.7 0.3 2.2 2 0 0 2 2 2 0 Tubulin binding cofactor A Nudix_N_2 PF14803.6 ORF30414 - 0.064 13.2 0.4 0.064 13.2 0.4 2.1 2 0 0 2 2 2 0 Nudix N-terminal HypA PF01155.19 ORF30414 - 0.093 12.8 2.4 0.46 10.5 2.4 2.1 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1 PF03811.13 ORF30414 - 0.12 12.2 2.3 7.8 6.3 0.1 2.5 2 0 0 2 2 2 0 InsA N-terminal domain YscO PF07321.12 ORF30414 - 0.33 10.9 4.7 0.18 11.8 1.6 1.9 1 1 1 2 2 2 0 Type III secretion protein YscO zinc_ribbon_10 PF10058.9 ORF30414 - 2.5 7.9 5.7 12 5.7 0.4 2.4 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein HAGH_C PF16123.5 ORF27648 - 1.9e-22 79.6 0.2 2.4e-22 79.2 0.2 1.2 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 ORF27648 - 0.0014 18.7 0.2 0.0024 17.9 0.2 1.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily BTB PF00651.31 ORF26966 - 4e-23 81.8 0.5 1.6e-21 76.6 0.1 2.1 1 1 1 2 2 2 2 BTB/POZ domain BACK PF07707.15 ORF26966 - 2.4e-05 24.4 0.2 0.032 14.3 0.0 3.2 3 0 0 3 3 3 2 BTB And C-terminal Kelch tRNA_edit PF04073.15 ORF24917 - 1.9e-06 28.0 0.0 4.1e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain VAD1-2 PF15310.6 ORF24917 - 0.015 15.2 4.8 0.018 14.9 4.8 1.1 1 0 0 1 1 1 0 Vitamin A-deficiency (VAD) rat model signalling Red1 PF07964.11 ORF24917 - 3.4 5.8 5.1 4.1 5.5 5.1 1.0 1 0 0 1 1 1 0 Rec10 / Red1 DUF676 PF05057.14 ORF24046 - 2.7e-10 40.1 0.0 7e-10 38.8 0.0 1.7 2 0 0 2 2 2 1 Putative serine esterase (DUF676) LRR19-TM PF15176.6 ORF23921 - 0.00087 19.2 0.2 0.00087 19.2 0.2 1.9 1 1 1 2 2 2 1 Leucine-rich repeat family 19 TM domain WBP-1 PF11669.8 ORF23921 - 0.0074 16.9 0.3 0.18 12.5 0.0 2.2 2 0 0 2 2 2 1 WW domain-binding protein 1 Comm PF15957.5 ORF23921 - 0.056 13.8 6.0 1.9 8.8 1.4 2.2 1 1 1 2 2 2 0 Commissureless Shisa PF13908.6 ORF23921 - 0.068 13.4 1.2 0.08 13.2 0.0 1.7 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator DUF4834 PF16118.5 ORF23921 - 0.15 13.1 3.2 5.9 7.9 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4834) DUF3899 PF13038.6 ORF23921 - 0.35 11.4 3.4 1.2 9.7 3.4 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3899) Sigma_reg_N PF13800.6 ORF23921 - 0.39 11.0 3.4 0.66 10.3 0.2 2.4 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Ninjurin PF04923.12 ORF23921 - 1.9 8.4 6.3 1.4 8.9 0.2 2.3 1 1 1 2 2 2 0 Ninjurin SHOCT PF09851.9 ORF238 - 0.54 10.1 2.4 0.93 9.3 2.4 1.4 1 0 0 1 1 1 0 Short C-terminal domain HTH_Tnp_Tc5 PF03221.16 ORF23050 - 1.6e-15 56.8 0.2 3e-15 56.0 0.2 1.5 1 0 0 1 1 1 1 Tc5 transposase DNA-binding domain SPACA7 PF15307.6 ORF23050 - 0.058 13.7 3.9 0.78 10.0 0.6 2.2 1 1 1 2 2 2 0 Sperm acrosome-associated protein 7 WGR PF05406.15 ORF21466 - 8e-13 48.3 1.0 8e-13 48.3 1.0 1.7 2 0 0 2 2 2 1 WGR domain PARP_reg PF02877.14 ORF21466 - 0.00019 21.5 1.0 0.00019 21.5 1.0 1.6 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase, regulatory domain Peptidase_S74 PF13884.6 ORF21466 - 0.067 13.5 0.7 0.15 12.4 0.7 1.7 1 0 0 1 1 1 0 Chaperone of endosialidase Asp PF00026.23 ORF21395 - 5.5e-05 22.7 0.1 0.019 14.4 0.0 2.0 1 1 1 2 2 2 2 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF21395 - 0.022 14.6 0.0 0.34 10.7 0.0 2.1 1 1 0 2 2 2 0 Xylanase inhibitor C-terminal DUF3685 PF12452.8 ORF19921 - 0.078 12.7 0.3 0.12 12.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) NAD_binding_1 PF00175.21 ORF19921 - 0.097 13.3 0.7 0.18 12.5 0.7 1.5 1 1 0 1 1 1 0 Oxidoreductase NAD-binding domain PP2C_C PF07830.13 ORF19921 - 0.75 10.3 6.2 0.83 10.2 3.4 2.1 2 0 0 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain betaPIX_CC PF16523.5 ORF19921 - 1.7 8.5 8.5 2.3 8.1 3.0 2.8 3 0 0 3 3 3 0 betaPIX coiled coil Myc_target_1 PF15179.6 ORF1908 - 0.072 13.0 4.2 0.089 12.7 3.8 1.6 1 1 0 1 1 1 0 Myc target protein 1 PH PF00169.29 ORF18855 - 0.0014 19.1 0.9 0.0025 18.3 0.9 1.6 1 1 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF18855 - 0.38 11.2 6.3 2.5 8.6 6.3 2.2 1 1 0 1 1 1 0 Pleckstrin homology domain Acetyltransf_1 PF00583.25 ORF13712 - 1e-12 48.3 0.0 1.5e-12 47.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF13712 - 5.2e-08 32.9 0.1 7.9e-08 32.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF13712 - 5.6e-08 33.1 0.0 9.9e-08 32.3 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF13712 - 4.1e-05 23.5 0.0 0.00011 22.1 0.0 1.8 1 1 0 1 1 1 1 FR47-like protein HTHP PF11534.8 ORF13712 - 0.00027 21.3 0.0 0.00046 20.6 0.0 1.4 1 0 0 1 1 1 1 Hexameric tyrosine-coordinated heme protein (HTHP) Acetyltransf_9 PF13527.7 ORF13712 - 0.0018 18.3 0.0 0.0034 17.5 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF13712 - 0.019 15.1 0.0 0.035 14.2 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 ORF13712 - 0.043 13.3 0.4 0.052 13.0 0.4 1.2 1 0 0 1 1 1 0 Putative acetyl-transferase Qua1 PF16274.5 ORF13712 - 0.057 13.3 0.1 0.12 12.2 0.1 1.5 1 0 0 1 1 1 0 Qua1 domain SH3_10 PF17902.1 ORF13564 - 0.011 15.7 0.0 1.1 9.4 0.0 2.3 2 0 0 2 2 2 0 SH3 domain PCM1_C PF15717.5 ORF13564 - 0.69 8.5 5.5 13 4.3 0.0 2.0 2 0 0 2 2 2 0 Pericentriolar material 1 C terminus Ribosomal_L3 PF00297.22 ORF110796 - 1.1e-19 70.7 6.7 1.5e-17 63.7 4.3 2.2 1 1 1 2 2 2 2 Ribosomal protein L3 GATase PF00117.28 ORF108015 - 5.4e-05 23.0 0.0 8.1e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF108015 - 0.00015 21.6 0.0 0.00021 21.1 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 DUF676 PF05057.14 ORF105196 - 2.7e-10 40.1 0.0 7e-10 38.8 0.0 1.7 2 0 0 2 2 2 1 Putative serine esterase (DUF676) Ribosomal_L12 PF00542.19 ORF105167 - 3.9e-19 68.8 8.2 1.5e-17 63.7 3.7 2.6 3 0 0 3 3 3 2 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 ORF105167 - 3.1e-17 62.0 7.6 3.1e-17 62.0 7.6 2.4 2 0 0 2 2 2 1 Ribosomal protein L7/L12 dimerisation domain UPF0239 PF06783.11 ORF10403 - 0.0074 16.4 1.5 0.17 12.0 0.3 2.7 2 1 0 3 3 3 1 Uncharacterised protein family (UPF0239) Cadherin_C_2 PF16492.5 ORF10403 - 0.034 14.9 0.2 1.4 9.7 0.0 2.4 2 1 0 2 2 2 0 Cadherin cytoplasmic C-terminal Sigma_reg_N PF13800.6 ORF10403 - 0.049 13.9 0.1 3.2 8.1 0.1 2.4 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Arm PF00514.23 ORF103245 - 0.013 15.5 0.0 0.099 12.7 0.0 2.3 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat V-ATPase_H_N PF03224.14 ORF103245 - 0.071 12.4 0.0 0.087 12.1 0.0 1.1 1 0 0 1 1 1 0 V-ATPase subunit H SecY PF00344.20 ORF101695 - 6.3e-22 78.2 6.9 1e-21 77.6 6.9 1.3 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 ORF101695 - 7.1e-17 61.0 1.2 1.3e-16 60.1 0.1 2.0 2 0 0 2 2 2 1 Plug domain of Sec61p Evr1_Alr PF04777.13 ORF100095 - 2.5e-10 40.7 0.1 4.3e-10 39.9 0.1 1.4 1 0 0 1 1 1 1 Erv1 / Alr family Peptidase_U40 PF10464.9 NODE_37651_length_565_cov_2.490566_g30384_i0reverse_frame_1 - 0.046 13.4 0.0 0.079 12.6 0.0 1.3 1 0 0 1 1 1 0 Peptidase U40 IFNGR1 PF07140.11 NODE_37637_length_565_cov_63.896226_g30372_i0forward_frame_1 - 0.075 13.1 0.2 0.11 12.6 0.2 1.4 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) CcmD PF04995.14 NODE_37621_length_565_cov_158.145283_g14262_i1reverse_frame_1 - 4.2 7.5 5.2 4.8 7.3 0.4 2.2 2 0 0 2 2 2 0 Heme exporter protein D (CcmD) PrcB_C PF14343.6 NODE_37602_length_566_cov_2.214689_g30339_i0forward_frame_1 - 0.024 14.8 0.2 0.052 13.7 0.2 1.5 1 0 0 1 1 1 0 PrcB C-terminal DUF4251 PF14059.6 NODE_37602_length_566_cov_2.214689_g30339_i0forward_frame_1 - 0.028 14.3 1.5 0.051 13.5 1.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4251) NLBH PF05211.12 NODE_37602_length_566_cov_2.214689_g30339_i0forward_frame_1 - 0.033 13.7 0.2 0.13 11.8 0.0 1.8 2 0 0 2 2 2 0 Neuraminyllactose-binding hemagglutinin precursor (NLBH) TonB_C PF03544.14 NODE_37601_length_566_cov_2.265537_g30338_i0reverse_frame_1 - 0.16 12.4 0.0 0.43 11.0 0.0 1.7 2 0 0 2 2 2 0 Gram-negative bacterial TonB protein C-terminal DSPc PF00782.20 NODE_37587_length_566_cov_78.222222_g30325_i0reverse_frame_1 - 1.8e-06 27.8 0.0 2.9e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_37587_length_566_cov_78.222222_g30325_i0reverse_frame_1 - 0.0056 16.3 0.0 0.008 15.8 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 NODE_37587_length_566_cov_78.222222_g30325_i0reverse_frame_1 - 0.047 13.8 0.0 0.079 13.1 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate CDKN3 PF05706.12 NODE_37587_length_566_cov_78.222222_g30325_i0reverse_frame_1 - 0.19 11.4 0.0 0.31 10.7 0.0 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) ABC_tran PF00005.27 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 1.5e-07 32.0 0.3 1.5e-07 32.0 0.3 1.8 2 0 0 2 2 2 1 ABC transporter AAA_29 PF13555.6 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.0014 18.3 0.0 0.0026 17.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.0024 17.8 0.4 0.0039 17.1 0.4 1.6 1 1 0 1 1 1 1 RsgA GTPase Dynamin_N PF00350.23 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.003 17.6 0.3 0.003 17.6 0.3 2.5 2 1 0 2 2 2 1 Dynamin family SMC_N PF02463.19 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.004 16.6 0.0 0.004 16.6 0.0 1.9 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.0041 17.2 0.3 0.016 15.3 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_21 PF13304.6 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.0074 16.1 0.8 0.064 13.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system GTP_EFTU PF00009.27 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.02 14.4 3.0 0.027 14.0 0.0 2.0 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_16 PF13191.6 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.023 15.1 0.0 0.037 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain DAHP_snth_FXD PF18152.1 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.023 14.5 0.1 0.054 13.3 0.1 1.7 1 0 0 1 1 1 0 DAHP synthase ferredoxin-like domain DUF3987 PF13148.6 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.029 13.4 2.5 0.17 10.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) AAA_22 PF13401.6 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.032 14.5 0.2 0.093 13.0 0.2 1.7 1 1 0 1 1 1 0 AAA domain FAM76 PF16046.5 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.078 12.3 7.9 0.085 12.2 7.9 1.2 1 0 0 1 1 1 0 FAM76 protein Presenilin PF01080.17 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.16 10.7 4.4 0.2 10.4 4.4 1.1 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 0.52 9.0 7.3 0.54 9.0 7.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 AAA_11 PF13086.6 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 1.7 8.4 10.5 4.3 7.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain PTPRCAP PF15713.5 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 1.9 8.8 11.4 3.1 8.1 11.4 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Zip PF02535.22 NODE_37578_length_566_cov_97.719397_g30318_i0forward_frame_1 - 2.6 7.2 4.9 2.7 7.1 4.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Fer4 PF00037.27 NODE_37567_length_566_cov_242.150659_g30307_i0forward_frame_1 - 0.25 11.2 2.9 0.22 11.4 0.9 2.0 2 0 0 2 2 2 0 4Fe-4S binding domain Tubulin PF00091.25 NODE_37557_length_566_cov_1922.431262_g30301_i0forward_frame_1 - 7.3e-56 189.5 0.0 8e-56 189.4 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 NODE_37557_length_566_cov_1922.431262_g30301_i0forward_frame_1 - 0.0097 15.6 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Tubulin domain Tubulin_2 PF13809.6 NODE_37557_length_566_cov_1922.431262_g30301_i0forward_frame_1 - 0.042 13.0 0.0 0.052 12.7 0.0 1.1 1 0 0 1 1 1 0 Tubulin like p450 PF00067.22 NODE_37554_length_567_cov_1.996241_g30298_i0reverse_frame_1 - 1e-44 153.1 0.0 1.2e-44 152.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 S_100 PF01023.19 NODE_37553_length_567_cov_2.605263_g30297_i0forward_frame_1 - 0.18 11.5 0.5 0.28 10.9 0.5 1.2 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain FANC_SAP PF18081.1 NODE_37540_length_567_cov_66.242481_g30284_i0reverse_frame_1 - 0.13 12.4 0.1 0.23 11.7 0.1 1.4 1 0 0 1 1 1 0 Fanconi anemia-associated nuclease SAP domain DUF1643 PF07799.12 NODE_37534_length_567_cov_86.708647_g30278_i0reverse_frame_1 - 0.028 14.6 2.5 1.4 9.1 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1643) DUF4097 PF13349.6 NODE_37524_length_567_cov_165.862782_g30268_i0reverse_frame_1 - 0.15 11.4 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Putative adhesin DUF2951 PF11166.8 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 0.0033 17.6 5.0 0.0033 17.6 5.0 3.9 1 1 3 4 4 4 1 Protein of unknown function (DUF2951) Fib_alpha PF08702.10 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 0.05 13.8 30.9 0.13 12.4 13.6 2.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Lipoprotein_20 PF13942.6 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 0.15 12.0 25.6 0.47 10.4 9.1 3.9 1 1 3 4 4 4 0 YfhG lipoprotein Muted PF14942.6 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 1.9 8.8 28.8 0.57 10.5 11.4 2.3 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein Golgin_A5 PF09787.9 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 2.5 7.5 30.3 1.3 8.4 17.6 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 THOC7 PF05615.13 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 3.6 7.9 26.4 0.078 13.3 6.5 3.0 1 1 2 3 3 3 0 Tho complex subunit 7 UPF0242 PF06785.11 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 4.1 7.5 32.7 1.2 9.2 15.5 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Jnk-SapK_ap_N PF09744.9 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 6.4 7.0 34.5 5.7 7.1 17.7 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 IQ PF00612.27 NODE_37496_length_568_cov_73.427767_g30246_i0forward_frame_2 - 0.0044 16.7 0.2 0.009 15.7 0.2 1.6 1 0 0 1 1 1 1 IQ calmodulin-binding motif LptF_LptG PF03739.14 NODE_37496_length_568_cov_73.427767_g30246_i0forward_frame_2 - 0.78 8.5 3.3 0.87 8.4 3.3 1.2 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG hNIFK_binding PF12196.8 NODE_37496_length_568_cov_73.427767_g30246_i0forward_frame_2 - 1.2 8.7 3.4 5.8 6.5 0.9 3.0 3 0 0 3 3 3 0 FHA Ki67 binding domain of hNIFK CPSase_L_D3 PF02787.19 NODE_37494_length_568_cov_78.018762_g30244_i0reverse_frame_3 - 0.011 16.1 0.5 0.027 14.8 0.5 1.8 1 1 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DUF1406 PF07190.11 NODE_37475_length_568_cov_209.872420_g30226_i0reverse_frame_2 - 0.059 13.3 2.1 0.095 12.6 0.1 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1406) BTK PF00779.19 NODE_37473_length_568_cov_227.703565_g30224_i0forward_frame_2 - 1.4 8.8 6.8 6.5 6.7 0.3 2.4 2 0 0 2 2 2 0 BTK motif RBP_receptor PF14752.6 NODE_37471_length_568_cov_272.658537_g27303_i1reverse_frame_2 - 0.15 10.6 8.5 0.21 10.1 8.5 1.1 1 0 0 1 1 1 0 Retinol binding protein receptor PDR_CDR PF06422.12 NODE_37471_length_568_cov_272.658537_g27303_i1reverse_frame_2 - 0.79 9.7 5.5 2 8.4 5.5 1.7 1 0 0 1 1 1 0 CDR ABC transporter IGF2_C PF08365.11 NODE_37457_length_569_cov_2.932584_g30211_i0reverse_frame_2 - 0.12 12.4 2.0 0.19 11.8 0.4 2.0 2 0 0 2 2 2 0 Insulin-like growth factor II E-peptide ABC_tran PF00005.27 NODE_37456_length_569_cov_2.988764_g30210_i0forward_frame_2 - 5.4e-15 56.1 0.4 8.7e-15 55.4 0.4 1.4 1 0 0 1 1 1 1 ABC transporter Peripla_BP_4 PF13407.6 NODE_37456_length_569_cov_2.988764_g30210_i0forward_frame_2 - 9.9e-11 41.7 1.0 1.4e-10 41.2 1.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain AAA_29 PF13555.6 NODE_37456_length_569_cov_2.988764_g30210_i0forward_frame_2 - 0.0011 18.6 0.1 0.0032 17.2 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 NODE_37456_length_569_cov_2.988764_g30210_i0forward_frame_2 - 0.0021 17.9 0.2 0.0028 17.5 0.2 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 NODE_37456_length_569_cov_2.988764_g30210_i0forward_frame_2 - 0.011 15.6 0.1 0.02 14.8 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase DLIC PF05783.11 NODE_37456_length_569_cov_2.988764_g30210_i0forward_frame_2 - 0.016 14.1 0.1 0.025 13.4 0.1 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_30 PF13604.6 NODE_37456_length_569_cov_2.988764_g30210_i0forward_frame_2 - 0.026 14.2 0.5 0.055 13.2 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 NODE_37456_length_569_cov_2.988764_g30210_i0forward_frame_2 - 0.031 14.8 0.0 0.042 14.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_27 PF13514.6 NODE_37456_length_569_cov_2.988764_g30210_i0forward_frame_2 - 0.046 13.3 0.1 0.11 12.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain RL PF17797.1 NODE_37453_length_569_cov_3.425094_g30207_i0reverse_frame_3 - 0.12 12.4 0.6 0.19 11.7 0.6 1.3 1 0 0 1 1 1 0 RL domain RB_A PF01858.17 NODE_37453_length_569_cov_3.425094_g30207_i0reverse_frame_2 - 9.1e-17 61.5 0.7 1.7e-16 60.6 0.1 1.7 1 1 1 2 2 2 1 Retinoblastoma-associated protein A domain RB_B PF01857.20 NODE_37453_length_569_cov_3.425094_g30207_i0reverse_frame_2 - 5.1e-05 23.3 0.1 0.00013 22.0 0.0 1.7 2 0 0 2 2 2 1 Retinoblastoma-associated protein B domain DUF2584 PF10763.9 NODE_37453_length_569_cov_3.425094_g30207_i0reverse_frame_2 - 0.086 13.0 0.1 0.23 11.7 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2584) HbrB PF08539.11 NODE_37450_length_569_cov_4.588015_g30204_i0forward_frame_3 - 0.11 12.4 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 HbrB-like Hydrolase_6 PF13344.6 NODE_37450_length_569_cov_4.588015_g30204_i0forward_frame_2 - 8e-23 80.5 0.0 1.2e-22 79.9 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 NODE_37450_length_569_cov_4.588015_g30204_i0forward_frame_2 - 0.00082 19.7 0.2 0.028 14.7 0.0 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase TRAF6_Z2 PF18048.1 NODE_37448_length_569_cov_7.009363_g30202_i0reverse_frame_2 - 6.9 6.9 8.5 8.5 6.6 1.1 3.1 3 0 0 3 3 3 0 TNF receptor-associated factor 6 zinc finger 2 Syntaxin_2 PF14523.6 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_3 - 0.05 14.0 0.2 0.074 13.4 0.2 1.2 1 0 0 1 1 1 0 Syntaxin-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks108.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks108.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks108.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks108.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HycA_repressor PF11046.8 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_2 - 0.026 14.7 0.5 0.045 13.9 0.4 1.4 1 1 0 1 1 1 0 Transcriptional repressor of hyc and hyp operons DUF2340 PF10209.9 NODE_37448_length_569_cov_7.009363_g30202_i0forward_frame_2 - 0.043 14.3 0.8 0.057 13.9 0.2 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2340) Serinc PF03348.15 NODE_37446_length_569_cov_8.898876_g30200_i0forward_frame_2 - 0.36 9.7 6.2 0.54 9.1 0.2 2.2 2 0 0 2 2 2 0 Serine incorporator (Serinc) MCU PF04678.13 NODE_37445_length_569_cov_45.466292_g30199_i0reverse_frame_2 - 3.2 7.8 8.7 5.5 7.1 8.7 1.2 1 0 0 1 1 1 0 Mitochondrial calcium uniporter DLIC PF05783.11 NODE_37444_length_569_cov_48.142322_g30198_i0forward_frame_2 - 4.1 6.1 4.2 5.4 5.7 4.2 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) Hypoth_Ymh PF09509.10 NODE_37442_length_569_cov_59.138577_g30196_i0reverse_frame_3 - 0.0049 16.8 0.6 0.01 15.7 0.6 1.5 1 0 0 1 1 1 1 Protein of unknown function (Hypoth_ymh) LepB_GAP_N PF18172.1 NODE_37438_length_569_cov_78.713483_g30192_i0forward_frame_3 - 0.1 12.5 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 LepB GAP domain N-terminal subdomain UQ_con PF00179.26 NODE_37432_length_569_cov_100.101124_g30186_i0reverse_frame_2 - 4e-40 136.7 0.0 5.8e-40 136.2 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 NODE_37432_length_569_cov_100.101124_g30186_i0reverse_frame_2 - 0.018 14.7 0.0 0.026 14.2 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family B SelK_SelG PF10961.8 NODE_37424_length_569_cov_151.786517_g30179_i0forward_frame_3 - 0.23 12.1 2.3 0.62 10.7 1.0 2.1 1 1 1 2 2 2 0 Selenoprotein SelK_SelG Renin_r PF07850.14 NODE_37420_length_569_cov_189.078652_g30175_i0reverse_frame_3 - 0.34 11.5 0.1 0.34 11.5 0.1 2.6 2 1 0 2 2 2 0 Renin receptor-like protein Tetraspanin PF00335.20 NODE_37420_length_569_cov_189.078652_g30175_i0reverse_frame_3 - 1.1 9.0 15.5 1.1 9.0 13.5 1.7 1 1 1 2 2 2 0 Tetraspanin family PHD_2 PF13831.6 NODE_37418_length_569_cov_203.919476_g30173_i0reverse_frame_2 - 0.018 14.6 3.2 0.05 13.2 3.2 1.7 1 0 0 1 1 1 0 PHD-finger zf-B_box PF00643.24 NODE_37418_length_569_cov_203.919476_g30173_i0reverse_frame_2 - 0.019 15.1 9.8 0.019 15.1 9.8 2.1 2 0 0 2 2 2 0 B-box zinc finger PHD PF00628.29 NODE_37418_length_569_cov_203.919476_g30173_i0reverse_frame_2 - 0.02 14.8 6.1 0.02 14.8 6.1 1.9 2 1 0 2 2 2 0 PHD-finger Prok-RING_1 PF14446.6 NODE_37418_length_569_cov_203.919476_g30173_i0reverse_frame_2 - 0.53 10.2 6.1 0.98 9.4 6.1 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 PHD_2 PF13831.6 NODE_37414_length_569_cov_229.196629_g30169_i0forward_frame_2 - 0.017 14.6 3.2 0.05 13.2 3.2 1.8 1 0 0 1 1 1 0 PHD-finger zf-B_box PF00643.24 NODE_37414_length_569_cov_229.196629_g30169_i0forward_frame_2 - 0.019 15.1 9.8 0.019 15.1 9.8 2.1 2 0 0 2 2 2 0 B-box zinc finger PHD PF00628.29 NODE_37414_length_569_cov_229.196629_g30169_i0forward_frame_2 - 0.02 14.8 6.1 0.02 14.8 6.1 2.0 2 1 0 2 2 2 0 PHD-finger Alpha-2-MRAP_C PF06401.11 NODE_37414_length_569_cov_229.196629_g30169_i0forward_frame_2 - 0.038 14.0 1.4 0.051 13.5 1.4 1.1 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain Prok-RING_1 PF14446.6 NODE_37414_length_569_cov_229.196629_g30169_i0forward_frame_2 - 0.52 10.3 6.1 0.98 9.4 6.1 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF423 PF04241.15 NODE_37410_length_569_cov_304.288390_g30165_i0forward_frame_2 - 1.4 9.2 4.7 0.82 9.9 1.4 2.2 1 1 2 3 3 3 0 Protein of unknown function (DUF423) DUF1943 PF09172.11 NODE_37404_length_569_cov_614.146067_g24485_i1forward_frame_2 - 1.8 7.7 5.4 1.2 8.3 0.1 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF1943) THAP PF05485.12 NODE_37391_length_570_cov_3.373832_g30150_i0forward_frame_2 - 0.19 12.7 0.1 0.19 12.7 0.1 1.5 2 0 0 2 2 2 0 THAP domain RuvB_N PF05496.12 NODE_37387_length_570_cov_23.971963_g30146_i0reverse_frame_3 - 0.04 13.7 0.0 0.054 13.2 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Peptidase_C16 PF01831.17 NODE_37386_length_570_cov_29.654206_g6793_i1forward_frame_2 - 0.08 12.7 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 Peptidase C16 family ODV-E18 PF10717.9 NODE_37386_length_570_cov_29.654206_g6793_i1forward_frame_2 - 0.54 10.2 5.0 0.18 11.7 2.0 1.7 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Pox_A14 PF05767.12 NODE_37386_length_570_cov_29.654206_g6793_i1forward_frame_2 - 0.66 10.2 5.1 0.16 12.2 0.7 2.0 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 zf-CW PF07496.15 NODE_37379_length_570_cov_80.414953_g30140_i0reverse_frame_3 - 0.031 14.3 2.0 0.031 14.3 2.0 2.2 2 0 0 2 2 2 0 CW-type Zinc Finger DUF1211 PF06736.11 NODE_37379_length_570_cov_80.414953_g30140_i0reverse_frame_3 - 0.094 13.2 1.7 0.17 12.4 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) LRR_6 PF13516.6 NODE_37370_length_570_cov_98.226168_g30131_i0reverse_frame_3 - 1e-05 25.2 0.6 0.16 12.1 0.2 3.7 3 0 0 3 3 3 2 Leucine Rich repeat LRR_4 PF12799.7 NODE_37370_length_570_cov_98.226168_g30131_i0reverse_frame_3 - 0.00084 19.7 0.2 0.34 11.4 0.6 3.1 2 1 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_37370_length_570_cov_98.226168_g30131_i0reverse_frame_3 - 0.021 15.3 3.7 0.78 10.5 0.9 3.9 3 3 0 3 3 3 0 Leucine Rich Repeat LEAP-2 PF07359.11 NODE_37370_length_570_cov_98.226168_g30131_i0forward_frame_3 - 0.52 10.2 0.1 0.52 10.2 0.1 2.4 2 1 0 2 2 2 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Securin PF04856.13 NODE_37359_length_570_cov_164.084112_g30120_i0reverse_frame_2 - 0.018 15.0 0.3 0.029 14.4 0.3 1.3 1 0 0 1 1 1 0 Securin sister-chromatid separation inhibitor UCH PF00443.29 NODE_37356_length_570_cov_216.112150_g30118_i0reverse_frame_2 - 2.3e-06 27.3 0.1 3.2e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF2873 PF11395.8 NODE_37356_length_570_cov_216.112150_g30118_i0forward_frame_2 - 6.2 6.8 9.4 0.96 9.4 0.4 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2873) RRM_1 PF00076.22 NODE_37353_length_570_cov_271.295327_g30115_i0forward_frame_3 - 9.6e-19 67.0 0.0 1.4e-18 66.5 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CPBP PF02517.16 ORF99979 - 0.0011 19.3 1.1 0.0025 18.1 1.1 1.6 1 0 0 1 1 1 1 CPBP intramembrane metalloprotease T2SSM PF04612.12 ORF99979 - 1 9.4 4.8 0.68 10.0 0.8 2.1 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein M Cluap1 PF10234.9 ORF9996 - 3.7e-61 206.9 0.1 4.1e-61 206.7 0.1 1.0 1 0 0 1 1 1 1 Clusterin-associated protein-1 SIR2 PF02146.17 ORF99225 - 1.9e-27 96.4 0.0 2.4e-27 96.0 0.0 1.1 1 0 0 1 1 1 1 Sir2 family TPP_enzyme_M PF00205.22 ORF99225 - 0.0015 18.3 0.0 0.0022 17.7 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Phage_lysozyme PF00959.19 ORF96086 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF96086 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Phage_lysozyme PF00959.19 ORF95362 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF95362 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Phage_lysozyme PF00959.19 ORF94782 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF94782 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) U-box PF04564.15 ORF93267 - 4.5e-13 49.2 0.0 7.4e-13 48.5 0.0 1.4 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 ORF93267 - 0.058 13.2 0.1 0.16 11.8 0.1 1.7 1 1 1 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit NUMOD4 PF07463.11 ORF93092 - 0.033 14.4 0.2 0.26 11.5 0.2 2.3 1 1 0 1 1 1 0 NUMOD4 motif tRNA-synt_1_2 PF13603.6 ORF93092 - 0.096 12.2 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 GDPD_2 PF13653.6 ORF92840 - 0.017 15.6 9.5 41 4.8 0.1 5.5 5 0 0 5 5 5 0 Glycerophosphoryl diester phosphodiesterase family Thiamine_BP PF01910.17 ORF92840 - 0.068 13.1 21.3 3.2 7.7 1.3 4.4 1 1 3 4 4 4 0 Thiamine-binding protein EB1_binding PF05937.11 ORF92840 - 0.8 10.3 1.8 26 5.3 0.1 2.4 1 1 1 2 2 2 0 EB-1 Binding Domain DUF4058 PF13267.6 ORF92840 - 5.2 6.4 6.2 3.7 6.9 3.9 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4058) Pombe_5TM PF09437.10 ORF92840 - 6.4 6.3 5.9 4.8 6.8 0.7 2.4 1 1 1 2 2 2 0 Pombe specific 5TM protein Mak_N_cap PF18085.1 ORF92840 - 8.9 7.4 6.7 17 6.6 4.3 2.4 1 1 2 3 3 3 0 Maltokinase N-terminal cap domain Sel1 PF08238.12 ORF91970 - 7.9e-10 39.1 0.2 0.0012 19.4 0.0 2.3 2 0 0 2 2 2 2 Sel1 repeat Ail_Lom PF06316.11 ORF91970 - 0.15 11.8 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Enterobacterial Ail/Lom protein CDC45 PF02724.14 ORF91970 - 1.1 7.4 10.5 1.3 7.2 10.5 1.0 1 0 0 1 1 1 0 CDC45-like protein Aft1_OSA PF11785.8 ORF88420 - 0.0035 17.8 1.1 0.0068 16.8 1.1 1.5 1 0 0 1 1 1 1 Aft1 osmotic stress response (OSM) domain Hom_end_hint PF05203.16 ORF88420 - 0.005 16.8 0.4 0.0059 16.6 0.4 1.3 1 0 0 1 1 1 1 Hom_end-associated Hint BCL_N PF04714.13 ORF88420 - 0.012 15.7 0.2 0.022 14.8 0.2 1.5 1 0 0 1 1 1 0 BCL7, N-terminal conserver region Pkinase PF00069.25 ORF88190 - 4.5e-52 177.0 0.0 5e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF88190 - 1.5e-27 96.5 0.0 1.7e-27 96.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF88190 - 0.00054 19.4 0.3 0.00096 18.6 0.3 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF88190 - 0.00079 19.1 0.5 0.018 14.7 0.1 2.2 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF88190 - 0.00085 18.7 0.0 0.0024 17.2 0.0 1.7 1 1 1 2 2 2 1 Kinase-like Pox_ser-thr_kin PF05445.11 ORF88190 - 0.0094 15.0 0.1 0.015 14.3 0.1 1.3 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF88190 - 0.04 12.7 0.1 0.067 12.0 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF88190 - 0.072 13.0 0.3 0.45 10.4 0.2 1.8 1 1 0 2 2 2 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF88190 - 0.088 12.4 1.2 0.28 10.8 1.2 1.7 1 1 0 1 1 1 0 RIO1 family SurE PF01975.17 ORF87055 - 6.4e-37 127.2 0.0 7.8e-37 126.9 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE Pkinase PF00069.25 ORF84437 - 4.2e-52 177.1 0.0 4.7e-52 177.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF84437 - 3e-27 95.6 0.0 3.3e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF84437 - 0.00032 20.4 0.5 0.0076 15.9 0.0 2.3 1 1 2 3 3 3 1 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 ORF84437 - 0.00053 19.4 0.4 0.001 18.5 0.4 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF84437 - 0.00082 18.8 0.0 0.0023 17.3 0.0 1.8 1 1 1 2 2 2 1 Kinase-like Pox_ser-thr_kin PF05445.11 ORF84437 - 0.0095 14.9 0.0 0.015 14.3 0.0 1.3 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF84437 - 0.038 12.8 0.1 0.064 12.0 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase RIO1 PF01163.22 ORF84437 - 0.082 12.5 2.1 0.34 10.5 2.1 1.8 1 1 0 1 1 1 0 RIO1 family APH PF01636.23 ORF84437 - 0.088 12.7 0.4 0.23 11.3 0.3 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF84304 - 5.3e-11 42.4 0.1 7e-11 42.0 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF84304 - 1.1e-07 31.0 0.0 1.4e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase DUF5497 PF17601.2 ORF84304 - 0.07 13.5 0.5 0.64 10.4 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5497) DUF3810 PF12725.7 ORF83755 - 2.4 7.4 11.8 25 4.1 11.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) Ank_2 PF12796.7 ORF83240 - 4.9e-22 78.3 1.5 3.2e-13 50.1 0.3 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF83240 - 5.8e-21 74.3 1.0 8.2e-08 32.4 0.1 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF83240 - 2.7e-20 72.4 0.7 1.4e-10 41.5 0.0 2.6 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF83240 - 3e-18 65.4 2.8 5.8e-05 23.4 0.1 4.3 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF83240 - 9.2e-16 56.4 0.1 0.0014 19.0 0.0 4.3 4 0 0 4 4 4 3 Ankyrin repeat GATase_7 PF13537.6 ORF83240 - 0.031 14.2 0.0 31 4.5 0.0 3.0 2 1 1 3 3 3 0 Glutamine amidotransferase domain Peripla_BP_3 PF13377.6 ORF79434 - 6.6e-12 46.1 0.0 7.6e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 ORF79434 - 1.7e-05 24.5 0.0 2.7e-05 23.9 0.0 1.3 1 1 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 ORF79434 - 0.00062 19.3 0.0 0.00075 19.0 0.0 1.2 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family DUF812 PF05667.11 ORF78139 - 0.0059 15.6 18.5 0.0078 15.1 18.5 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF812) Fungal_TACC PF12709.7 ORF78139 - 0.014 15.8 7.4 0.014 15.8 7.4 2.9 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Prefoldin_2 PF01920.20 ORF78139 - 0.073 13.0 17.1 0.1 12.6 3.0 3.2 1 1 2 3 3 3 0 Prefoldin subunit Nup54 PF13874.6 ORF78139 - 0.3 11.2 10.1 1.9 8.6 1.2 3.1 1 1 2 3 3 3 0 Nucleoporin complex subunit 54 Sod_Fe_N PF00081.22 ORF78139 - 0.35 11.4 3.5 0.49 10.9 1.0 2.3 1 1 1 2 2 2 0 Iron/manganese superoxide dismutases, alpha-hairpin domain Bcr-Abl_Oligo PF09036.10 ORF78139 - 0.56 10.3 3.1 2.1 8.4 0.5 2.6 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain DUF1640 PF07798.11 ORF78139 - 0.62 10.1 14.9 5 7.1 4.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) DUF4407 PF14362.6 ORF78139 - 0.81 9.0 7.1 1.1 8.5 7.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF78139 - 0.85 10.3 8.8 6.6 7.4 0.8 3.3 1 1 2 3 3 3 0 SlyX TPR_MLP1_2 PF07926.12 ORF78139 - 0.94 9.5 15.2 0.3 11.1 10.3 2.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Tup_N PF08581.10 ORF78139 - 0.98 9.8 24.6 0.19 12.0 3.0 3.4 1 1 2 3 3 3 0 Tup N-terminal Spc7 PF08317.11 ORF78139 - 1 8.1 21.4 1.2 8.0 2.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Atg14 PF10186.9 ORF78139 - 1.2 8.2 18.0 4.3 6.3 17.9 1.9 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMPIT PF07851.13 ORF78139 - 1.2 8.3 13.3 0.47 9.7 10.7 1.6 1 1 0 1 1 1 0 TMPIT-like protein DUF3450 PF11932.8 ORF78139 - 2.4 7.4 13.7 0.2 10.9 7.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) HIP1_clath_bdg PF16515.5 ORF78139 - 2.4 8.8 12.9 0.44 11.2 6.3 2.4 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF1664 PF07889.12 ORF78139 - 3.2 7.8 13.9 4 7.5 0.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF78139 - 4.6 7.3 22.8 1.7 8.7 12.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus SOGA PF11365.8 ORF78139 - 7.2 7.8 14.3 5.5 8.2 5.1 3.1 2 2 0 2 2 2 0 Protein SOGA DUF4200 PF13863.6 ORF78139 - 7.4 7.0 22.5 3.1 8.2 15.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF4140 PF13600.6 ORF78139 - 8.6 6.9 9.0 4.5 7.8 0.2 2.9 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) Menin PF05053.13 ORF77383 - 0.45 8.8 5.3 0.52 8.6 5.3 1.0 1 0 0 1 1 1 0 Menin MatE PF01554.18 ORF76763 - 1.1e-20 73.9 6.4 1.1e-20 73.9 6.4 1.3 2 0 0 2 2 2 1 MatE UCR_6-4kD PF08997.10 ORF76763 - 0.0072 16.2 0.3 0.66 10.0 0.1 2.4 2 0 0 2 2 2 1 Ubiquinol-cytochrome C reductase complex, 6.4kD protein SecY PF00344.20 ORF76763 - 0.021 14.1 3.4 0.023 14.0 3.4 1.2 1 1 0 1 1 1 0 SecY translocase FtsX PF02687.21 ORF76763 - 4.1 7.9 12.1 11 6.6 1.1 2.7 2 1 0 2 2 2 0 FtsX-like permease family LEAP-2 PF07359.11 ORF75479 - 0.19 11.6 0.0 0.33 10.8 0.0 1.3 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Pkinase PF00069.25 ORF7460 - 4.2e-52 177.1 0.0 4.7e-52 177.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7460 - 3e-27 95.6 0.0 3.3e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF7460 - 0.00032 20.4 0.5 0.0076 15.9 0.0 2.3 1 1 2 3 3 3 1 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 ORF7460 - 0.00053 19.4 0.4 0.001 18.5 0.4 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF7460 - 0.00082 18.8 0.0 0.0023 17.3 0.0 1.8 1 1 1 2 2 2 1 Kinase-like Pox_ser-thr_kin PF05445.11 ORF7460 - 0.0095 14.9 0.0 0.015 14.3 0.0 1.3 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF7460 - 0.038 12.8 0.1 0.064 12.0 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase RIO1 PF01163.22 ORF7460 - 0.082 12.5 2.1 0.34 10.5 2.1 1.8 1 1 0 1 1 1 0 RIO1 family APH PF01636.23 ORF7460 - 0.088 12.7 0.4 0.23 11.3 0.3 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF7459 - 6.9e-05 22.3 0.0 9.6e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain PET117 PF15786.5 ORF74558 - 0.14 12.5 0.0 0.27 11.5 0.0 1.5 1 0 0 1 1 1 0 PET assembly of cytochrome c oxidase, mitochondrial Phage_lysozyme PF00959.19 ORF73599 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF73599 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) EF-hand_1 PF00036.32 ORF72380 - 1.3e-32 108.9 18.5 4.7e-09 35.1 0.8 4.3 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF72380 - 5.1e-28 97.3 14.6 9.3e-14 51.6 4.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF72380 - 2.3e-24 83.2 13.5 5.8e-08 32.1 0.2 4.9 4 1 1 5 5 5 4 EF-hand domain EF-hand_8 PF13833.6 ORF72380 - 7.7e-23 80.1 15.1 3.3e-12 46.1 1.7 3.6 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF72380 - 3.7e-14 51.5 16.1 1.9e-05 23.9 0.4 4.6 4 1 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF72380 - 9.5e-11 41.9 1.7 5.6e-05 23.4 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF72380 - 3.2e-07 30.2 8.3 0.014 15.3 0.3 3.8 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF72380 - 0.00043 20.6 4.0 0.081 13.3 1.0 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_14 PF17959.1 ORF72380 - 0.0005 20.4 7.0 0.0022 18.3 0.9 2.9 2 2 1 3 3 3 1 EF-hand domain SurA_N_3 PF13624.6 ORF72380 - 0.001 18.9 4.9 0.058 13.2 2.6 2.1 2 0 0 2 2 2 2 SurA N-terminal domain SurA_N_2 PF13623.6 ORF72380 - 0.0029 17.5 2.9 0.92 9.4 0.4 2.9 2 1 0 2 2 2 2 SurA N-terminal domain Peptidase_S46 PF10459.9 ORF72380 - 0.0029 16.3 3.4 0.0029 16.4 3.4 1.1 1 0 0 1 1 1 1 Peptidase S46 DUF1002 PF06207.11 ORF72380 - 0.023 14.2 3.4 0.72 9.3 0.2 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1002) BDV_P40 PF06407.11 ORF72380 - 0.025 13.7 0.1 0.039 13.1 0.1 1.4 1 1 0 1 1 1 0 Borna disease virus P40 protein UPF0154 PF03672.13 ORF72380 - 0.063 13.3 3.0 0.62 10.1 0.0 3.1 4 0 0 4 4 3 0 Uncharacterised protein family (UPF0154) Acetyltransf_11 PF13720.6 ORF72380 - 0.12 12.9 0.3 0.39 11.2 0.2 2.0 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AAA_assoc_C PF09821.9 ORF72380 - 0.19 12.3 6.3 0.26 11.8 0.2 2.7 2 1 1 3 3 3 0 C-terminal AAA-associated domain K_channel_TID PF07941.11 ORF69902 - 0.021 15.3 3.8 0.036 14.5 3.8 1.3 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain DUF1995 PF09353.10 ORF68106 - 0.00021 21.4 0.2 0.00027 21.0 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1995) AAA PF00004.29 ORF65493 - 1.8e-12 47.8 0.0 2.6e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF65493 - 0.00039 20.9 0.2 0.0022 18.4 0.2 2.1 1 1 0 1 1 1 1 AAA ATPase domain TIP49 PF06068.13 ORF65493 - 0.00096 18.5 0.0 0.0011 18.2 0.0 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain Sigma54_activat PF00158.26 ORF65493 - 0.0043 16.8 0.0 0.0076 16.0 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain TsaE PF02367.17 ORF65493 - 0.0077 16.2 0.0 0.012 15.6 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_14 PF13173.6 ORF65493 - 0.015 15.3 0.0 0.023 14.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF65493 - 0.03 13.7 0.2 0.14 11.5 0.1 2.0 1 1 1 2 2 2 0 KaiC RuvB_N PF05496.12 ORF65493 - 0.043 13.6 0.0 0.072 12.8 0.0 1.5 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 ORF65493 - 0.06 13.3 1.1 0.17 11.8 0.1 2.0 2 0 0 2 2 2 0 NACHT domain Dpy-30 PF05186.13 ORF65493 - 0.08 12.7 0.1 0.2 11.4 0.0 1.6 2 0 0 2 2 2 0 Dpy-30 motif AAA_22 PF13401.6 ORF65493 - 0.086 13.1 1.0 7.9 6.8 0.1 2.3 1 1 1 2 2 2 0 AAA domain AAA_25 PF13481.6 ORF65493 - 0.11 12.0 0.7 0.4 10.2 0.2 2.1 1 1 1 3 3 3 0 AAA domain IPT PF01745.16 ORF65493 - 0.15 11.4 0.1 0.29 10.5 0.1 1.4 1 0 0 1 1 1 0 Isopentenyl transferase PhoH PF02562.16 ORF65493 - 0.15 11.4 0.0 0.25 10.8 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein NB-ARC PF00931.22 ORF65493 - 0.18 10.9 0.4 0.79 8.8 0.0 1.9 1 1 0 2 2 2 0 NB-ARC domain Malic_M PF03949.15 ORF64718 - 0.072 12.4 0.0 0.097 11.9 0.0 1.1 1 0 0 1 1 1 0 Malic enzyme, NAD binding domain CBAH PF02275.18 ORF64128 - 1.7e-11 44.4 0.0 2.1e-11 44.1 0.0 1.1 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family Pkinase PF00069.25 ORF6170 - 2.7e-41 141.7 0.1 2.8e-41 141.6 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6170 - 8.5e-22 77.7 0.1 9.1e-22 77.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF6170 - 4.2e-07 29.6 0.0 4.7e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF6170 - 0.0015 17.4 0.0 0.0022 16.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF6170 - 0.004 16.2 0.0 0.0057 15.6 0.0 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF6170 - 0.16 11.3 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Phage_lysozyme PF00959.19 ORF6108 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF6108 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Peptidase_M20 PF01546.28 ORF6087 - 3.8e-07 30.0 0.1 5.9e-07 29.4 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M42 PF05343.14 ORF6087 - 4.3e-05 22.7 0.0 5.8e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 ORF6087 - 0.0023 17.6 0.1 0.0044 16.7 0.0 1.5 2 0 0 2 2 2 1 Peptidase family M28 Pkinase PF00069.25 ORF60626 - 5.3e-11 42.4 0.1 7e-11 42.0 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF60626 - 1.1e-07 31.0 0.0 1.4e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase DUF5497 PF17601.2 ORF60626 - 0.07 13.5 0.5 0.64 10.4 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5497) Phage_lysozyme PF00959.19 ORF59980 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF59980 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) RabGAP-TBC PF00566.18 ORF58989 - 8.8e-12 45.1 2.0 1.2e-11 44.6 2.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Glyco_transf_11 PF01531.16 ORF58052 - 0.032 13.4 0.1 0.082 12.1 0.1 1.6 1 1 0 1 1 1 0 Glycosyl transferase family 11 Phage_lysozyme PF00959.19 ORF57767 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF57767 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Snf7 PF03357.21 ORF56509 - 3.9e-09 36.3 14.3 3.9e-09 36.3 14.3 1.3 2 0 0 2 2 2 1 Snf7 Ist1 PF03398.14 ORF56509 - 0.013 15.4 3.6 0.023 14.6 3.6 1.4 1 0 0 1 1 1 0 Regulator of Vps4 activity in the MVB pathway FbpA PF05833.11 ORF56509 - 0.018 13.8 5.2 0.048 12.4 0.2 2.1 1 1 1 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) CorA PF01544.18 ORF56509 - 0.026 13.8 0.4 0.044 13.1 0.4 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein WXG100 PF06013.12 ORF56509 - 4 7.7 9.8 4.5 7.6 0.1 3.8 1 1 3 4 4 4 0 Proteins of 100 residues with WXG Phage_lysozyme PF00959.19 ORF5626 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF5626 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) zf-RING_11 PF17123.5 ORF55269 - 2.6e-09 36.6 1.6 4.4e-09 35.9 1.6 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF55269 - 1.3e-06 28.6 1.3 1.9e-06 28.1 1.3 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF55269 - 0.00079 19.4 2.1 0.0013 18.7 2.1 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF55269 - 0.02 14.7 2.1 0.034 14.0 2.1 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF55269 - 0.023 14.5 1.7 0.033 14.0 1.7 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF55269 - 0.038 14.0 1.5 0.058 13.4 1.5 1.3 1 0 0 1 1 1 0 zinc-RING finger domain SDA1 PF05285.12 ORF55269 - 0.16 11.3 14.3 0.23 10.8 14.3 1.2 1 0 0 1 1 1 0 SDA1 zf-C3HC4_3 PF13920.6 ORF55269 - 0.18 11.7 0.9 0.26 11.2 0.9 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Ldh_1_C PF02866.18 ORF54715 - 2.2e-43 148.1 0.1 2.5e-43 147.9 0.1 1.0 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain SNARE_assoc PF09335.11 ORF53973 - 4.8e-11 43.2 6.9 7.6e-11 42.6 6.9 1.3 1 0 0 1 1 1 1 SNARE associated Golgi protein YqjK PF13997.6 ORF53973 - 0.038 14.2 0.5 1.9 8.8 0.1 2.6 2 0 0 2 2 2 0 YqjK-like protein tRNA_m1G_MT PF01746.21 ORF53838 - 1e-29 103.6 0.0 1.2e-29 103.4 0.0 1.1 1 0 0 1 1 1 1 tRNA (Guanine-1)-methyltransferase RNA_Me_trans PF04252.13 ORF53838 - 0.024 14.2 0.0 0.034 13.7 0.0 1.2 1 0 0 1 1 1 0 Predicted SAM-dependent RNA methyltransferase Metallophos PF00149.28 ORF53743 - 2.2e-26 93.6 0.1 2.8e-26 93.3 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF53743 - 0.16 12.2 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain SET PF00856.28 ORF53676 - 2.9e-09 37.5 0.3 0.0016 18.9 0.1 3.1 2 1 0 2 2 2 2 SET domain DUF4298 PF14131.6 ORF53676 - 0.12 12.3 0.0 3.5 7.7 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) Acyl_transf_3 PF01757.22 ORF53653 - 2.1e-11 43.5 13.7 2.5e-11 43.2 13.7 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF423 PF04241.15 ORF53653 - 7.4 6.9 8.0 5.5 7.3 0.7 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF423) Phage_lysozyme PF00959.19 ORF48667 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF48667 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) AAA_2 PF07724.14 ORF48038 - 1.2e-15 58.1 0.1 1.4e-15 57.8 0.1 1.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 ORF48038 - 5e-05 23.7 0.0 0.00017 22.0 0.0 1.8 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF3658 PF12395.8 ORF48035 - 0.069 13.0 0.3 6.6 6.7 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function NYD-SP28_assoc PF14775.6 ORF48035 - 0.2 11.8 2.4 0.48 10.6 2.4 1.7 1 0 0 1 1 1 0 Sperm tail C-terminal domain Aldo_ket_red PF00248.21 ORF47810 - 8.7e-15 54.7 0.0 2.1e-14 53.4 0.0 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family AAA_31 PF13614.6 ORF45921 - 0.06 13.3 0.6 0.11 12.4 0.6 1.5 1 0 0 1 1 1 0 AAA domain RHH_1 PF01402.21 ORF45921 - 0.17 11.9 3.7 16 5.6 0.1 3.3 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family Pkinase PF00069.25 ORF4589 - 4.2e-52 177.1 0.0 4.7e-52 177.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4589 - 3e-27 95.6 0.0 3.3e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF4589 - 0.00032 20.4 0.5 0.0076 15.9 0.0 2.3 1 1 2 3 3 3 1 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 ORF4589 - 0.00053 19.4 0.4 0.001 18.5 0.4 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF4589 - 0.00082 18.8 0.0 0.0023 17.3 0.0 1.8 1 1 1 2 2 2 1 Kinase-like Pox_ser-thr_kin PF05445.11 ORF4589 - 0.0095 14.9 0.0 0.015 14.3 0.0 1.3 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF4589 - 0.038 12.8 0.1 0.064 12.0 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase RIO1 PF01163.22 ORF4589 - 0.082 12.5 2.1 0.34 10.5 2.1 1.8 1 1 0 1 1 1 0 RIO1 family APH PF01636.23 ORF4589 - 0.088 12.7 0.4 0.23 11.3 0.3 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF45080 - 4.2e-52 177.1 0.0 4.7e-52 177.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45080 - 3e-27 95.6 0.0 3.3e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF45080 - 0.00032 20.4 0.5 0.0076 15.9 0.0 2.3 1 1 2 3 3 3 1 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 ORF45080 - 0.00053 19.4 0.4 0.001 18.5 0.4 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF45080 - 0.00082 18.8 0.0 0.0023 17.3 0.0 1.8 1 1 1 2 2 2 1 Kinase-like Pox_ser-thr_kin PF05445.11 ORF45080 - 0.0095 14.9 0.0 0.015 14.3 0.0 1.3 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF45080 - 0.038 12.8 0.1 0.064 12.0 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase RIO1 PF01163.22 ORF45080 - 0.082 12.5 2.1 0.34 10.5 2.1 1.8 1 1 0 1 1 1 0 RIO1 family APH PF01636.23 ORF45080 - 0.088 12.7 0.4 0.23 11.3 0.3 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family WD40 PF00400.32 ORF4437 - 5.1e-07 30.3 0.0 0.016 16.0 0.0 3.0 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF4437 - 9.1e-05 22.7 0.1 0.045 14.0 0.0 3.3 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain DUF5046 PF16465.5 ORF4437 - 0.071 12.5 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5046) Cytochrom_D1 PF02239.16 ORF4437 - 0.12 10.9 0.1 1 7.8 0.0 2.0 2 0 0 2 2 2 0 Cytochrome D1 heme domain Phage_lysozyme PF00959.19 ORF44031 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF44031 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) zf-C3HC4_3 PF13920.6 ORF41964 - 2.3e-07 30.5 11.0 4.4e-07 29.6 11.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF41964 - 2.2e-06 27.9 13.7 4.4e-06 26.9 13.7 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF41964 - 2.3e-06 27.3 14.8 4.3e-06 26.5 14.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF41964 - 3.9e-06 26.6 12.9 6e-05 22.8 13.2 2.3 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF41964 - 0.00034 20.7 13.5 0.0016 18.6 13.9 2.0 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 ORF41964 - 0.0012 18.7 14.5 0.0027 17.5 14.5 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF41964 - 0.0057 16.6 14.6 0.056 13.4 14.6 2.4 1 1 1 2 2 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF41964 - 0.016 15.5 11.6 0.075 13.3 11.6 2.2 1 1 0 1 1 1 0 RING-H2 zinc finger domain TaqI_C PF12950.7 ORF41964 - 0.058 13.5 1.9 0.11 12.6 1.8 1.4 1 1 0 1 1 1 0 TaqI-like C-terminal specificity domain zf-RING_UBOX PF13445.6 ORF41964 - 0.066 13.2 13.2 0.24 11.4 12.5 2.2 1 1 0 1 1 1 0 RING-type zinc-finger Rtf2 PF04641.12 ORF41964 - 0.16 11.3 5.8 0.18 11.1 5.8 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger Tudor-knot PF11717.8 ORF41964 - 0.19 11.7 0.1 0.19 11.7 0.1 2.1 2 1 0 2 2 2 0 RNA binding activity-knot of a chromodomain zf-RING_6 PF14835.6 ORF41964 - 0.52 10.2 10.2 1.1 9.1 10.2 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-B_box PF00643.24 ORF41964 - 2 8.6 14.6 0.071 13.3 7.2 2.2 2 0 0 2 2 2 0 B-box zinc finger FYVE PF01363.21 ORF41964 - 6.5 7.0 14.9 14 5.9 14.8 1.6 1 1 0 1 1 1 0 FYVE zinc finger Cluap1 PF10234.9 ORF39999 - 3.7e-61 206.9 0.1 4.1e-61 206.7 0.1 1.0 1 0 0 1 1 1 1 Clusterin-associated protein-1 DUF5531 PF17671.1 ORF39386 - 0.018 14.9 0.0 0.026 14.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5531) AAA_28 PF13521.6 ORF36571 - 0.0014 18.9 0.1 0.0019 18.4 0.1 1.3 1 0 0 1 1 1 1 AAA domain MukB_hinge PF16330.5 ORF36571 - 0.035 13.8 0.1 0.058 13.1 0.1 1.3 1 0 0 1 1 1 0 MukB hinge domain Phycoerythr_ab PF02972.14 ORF3602 - 0.011 15.6 0.1 0.019 14.8 0.1 1.4 1 0 0 1 1 1 0 Phycoerythrin, alpha/beta chain PsbU PF06514.11 ORF3587 - 2.5e-24 85.1 0.1 3.6e-24 84.6 0.1 1.2 1 0 0 1 1 1 1 Photosystem II 12 kDa extrinsic protein (PsbU) HHH_3 PF12836.7 ORF3587 - 0.0078 16.5 0.0 0.02 15.1 0.0 1.7 1 1 0 1 1 1 1 Helix-hairpin-helix motif DUF543 PF04418.12 ORF3587 - 0.17 11.9 0.6 0.75 9.8 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF543) Tad PF13400.6 ORF3587 - 5.5 7.4 13.3 0.7 10.2 7.7 2.1 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Phage_lysozyme PF00959.19 ORF35824 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF35824 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Acyl_transf_3 PF01757.22 ORF34865 - 7.3e-06 25.3 2.5 8.7e-06 25.0 2.5 1.1 1 0 0 1 1 1 1 Acyltransferase family DUF2637 PF10935.8 ORF34865 - 0.024 14.5 1.3 0.026 14.4 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2637) DUF1275 PF06912.11 ORF34865 - 0.14 12.1 1.8 0.2 11.6 1.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1275) DUF5396 PF17374.2 ORF34865 - 0.14 10.0 0.3 0.19 9.6 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5396) HTH_33 PF13592.6 ORF32764 - 0.095 12.4 0.1 6.2 6.6 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn helix DUF2554 PF10829.8 ORF32764 - 0.76 10.2 3.1 0.48 10.8 1.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2554) GnsAB_toxin PF08178.11 ORF32434 - 0.028 14.3 0.7 0.092 12.7 0.7 1.9 1 0 0 1 1 1 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system RNase_J_C PF17770.1 ORF32434 - 0.12 13.4 1.2 0.4 11.8 1.2 1.9 1 0 0 1 1 1 0 Ribonuclease J C-terminal domain EnY2 PF10163.9 ORF32434 - 0.16 12.4 2.7 0.6 10.5 0.1 2.5 2 1 0 2 2 2 0 Transcription factor e(y)2 Pkinase PF00069.25 ORF32326 - 1.7e-27 96.5 0.0 2.1e-27 96.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF32326 - 7.6e-19 68.0 0.0 1.2e-18 67.3 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF32326 - 0.014 14.3 0.0 0.016 14.2 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain RIO1 PF01163.22 ORF32326 - 0.018 14.6 0.3 0.16 11.6 0.1 2.0 1 1 0 2 2 2 0 RIO1 family Pox_ser-thr_kin PF05445.11 ORF32326 - 0.047 12.7 0.1 0.065 12.2 0.1 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Kdo PF06293.14 ORF32326 - 0.11 11.8 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family PGK PF00162.19 ORF30359 - 6.8e-54 183.3 1.5 7.6e-54 183.1 1.5 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Ldh_1_C PF02866.18 ORF30029 - 9.4e-41 139.5 0.0 1.1e-40 139.3 0.0 1.0 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain PPR_2 PF13041.6 ORF27440 - 4.7e-14 52.3 0.1 3.2e-12 46.4 0.0 3.4 2 2 3 5 5 5 2 PPR repeat family PPR PF01535.20 ORF27440 - 3.2e-11 42.7 1.3 0.0025 17.9 0.0 4.3 4 0 0 4 4 4 2 PPR repeat PPR_3 PF13812.6 ORF27440 - 5e-09 36.1 0.1 7.9e-07 29.1 0.0 2.8 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF27440 - 7.1e-09 35.2 0.1 0.00014 21.5 0.0 2.6 2 0 0 2 2 2 2 PPR repeat PPR_long PF17177.4 ORF27440 - 9.4e-07 28.4 0.1 1.5e-06 27.7 0.0 1.4 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP TPR_7 PF13176.6 ORF27440 - 0.00026 20.8 0.0 3.4 7.9 0.0 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF27440 - 0.0093 16.5 1.1 1.8 9.1 0.0 3.0 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF27440 - 0.0099 16.6 3.8 2.1 9.4 0.2 3.7 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF27440 - 0.13 12.6 0.3 1 9.7 0.0 2.5 1 1 2 3 3 3 0 Tetratricopeptide repeat Pkinase PF00069.25 ORF26610 - 4.5e-52 177.0 0.0 5e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF26610 - 1.5e-27 96.5 0.0 1.7e-27 96.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF26610 - 0.00054 19.4 0.3 0.00096 18.6 0.3 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF26610 - 0.00079 19.1 0.5 0.018 14.7 0.1 2.2 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF26610 - 0.00085 18.7 0.0 0.0024 17.2 0.0 1.7 1 1 1 2 2 2 1 Kinase-like Pox_ser-thr_kin PF05445.11 ORF26610 - 0.0094 15.0 0.1 0.015 14.3 0.1 1.3 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF26610 - 0.04 12.7 0.1 0.067 12.0 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF26610 - 0.072 13.0 0.3 0.45 10.4 0.2 1.8 1 1 0 2 2 2 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF26610 - 0.088 12.4 1.2 0.28 10.8 1.2 1.7 1 1 0 1 1 1 0 RIO1 family adh_short_C2 PF13561.6 ORF26057 - 5.4e-63 212.7 0.1 6e-63 212.5 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF26057 - 5.9e-05 22.6 0.0 6.9e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Phage_lysozyme PF00959.19 ORF25755 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF25755 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) AAA_2 PF07724.14 ORF24794 - 1.2e-15 58.1 0.1 1.4e-15 57.8 0.1 1.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 ORF24794 - 5e-05 23.7 0.0 0.00017 22.0 0.0 1.8 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) MFS_1 PF07690.16 ORF24631 - 4e-05 22.7 0.0 4e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3642 PF12182.8 ORF24631 - 0.017 15.4 1.1 0.029 14.6 1.1 1.5 1 0 0 1 1 1 0 Bacterial lipoprotein MucBP PF06458.12 ORF24631 - 1.5 9.9 5.9 6.7 7.8 2.0 2.2 1 1 1 2 2 2 0 MucBP domain C2 PF00168.30 ORF22256 - 2.7e-09 37.2 0.0 4.1e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 C2 domain Ank_4 PF13637.6 ORF19690 - 4.2e-22 78.2 0.5 2.3e-11 44.0 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF19690 - 3.9e-15 54.4 0.1 1e-06 28.6 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank_2 PF12796.7 ORF19690 - 4.2e-14 52.9 0.1 7.7e-14 52.1 0.1 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF19690 - 3.8e-13 49.2 0.4 1.5e-06 28.3 0.1 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF19690 - 8.5e-11 41.9 0.1 1.5e-06 28.4 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Glutaredoxin PF00462.24 ORF18468 - 4.7e-39 132.4 0.0 5.2e-19 68.2 0.0 2.4 2 0 0 2 2 2 2 Glutaredoxin SH3BGR PF04908.15 ORF18468 - 7.6e-07 29.2 0.0 0.036 14.2 0.1 2.5 2 1 0 2 2 2 2 SH3-binding, glutamic acid-rich protein RdRP PF05183.12 ORF18468 - 0.0019 17.0 0.0 0.043 12.4 0.0 1.9 1 1 0 2 2 2 2 RNA dependent RNA polymerase GST_N_3 PF13417.6 ORF18468 - 0.017 15.5 0.0 6.9 7.2 0.0 2.2 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain MORN PF02493.20 ORF17913 - 8.6e-31 104.0 35.3 4.8e-08 32.4 1.7 6.3 6 0 0 6 6 6 5 MORN repeat Tudor_2 PF18104.1 ORF17913 - 0.025 14.3 6.0 13 5.5 0.0 4.4 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain Otopetrin PF03189.13 ORF17913 - 0.082 11.7 0.0 0.082 11.7 0.0 1.1 1 0 0 1 1 1 0 Otopetrin Fringe PF02434.16 ORF17539 - 0.014 14.9 0.0 0.028 13.9 0.0 1.5 2 0 0 2 2 2 0 Fringe-like p25-alpha PF05517.12 ORF1628 - 0.11 12.7 0.1 0.17 12.1 0.1 1.2 1 0 0 1 1 1 0 p25-alpha Menin PF05053.13 ORF14962 - 0.45 8.8 5.3 0.52 8.6 5.3 1.0 1 0 0 1 1 1 0 Menin Pro_isomerase PF00160.21 ORF14518 - 9.2e-41 139.7 0.0 1.1e-40 139.5 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF2162 PF09930.9 ORF14002 - 0.077 12.4 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) PH PF00169.29 ORF12698 - 2.2e-06 28.1 0.0 3.5e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF12698 - 0.045 14.2 0.6 0.23 11.9 0.6 1.9 1 1 0 1 1 1 0 Pleckstrin homology domain Pkinase PF00069.25 ORF112500 - 4.5e-52 177.0 0.0 5e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF112500 - 1.5e-27 96.5 0.0 1.7e-27 96.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF112500 - 0.00054 19.4 0.3 0.00096 18.6 0.3 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF112500 - 0.00079 19.1 0.5 0.018 14.7 0.1 2.2 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF112500 - 0.00085 18.7 0.0 0.0024 17.2 0.0 1.7 1 1 1 2 2 2 1 Kinase-like Pox_ser-thr_kin PF05445.11 ORF112500 - 0.0094 15.0 0.1 0.015 14.3 0.1 1.3 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF112500 - 0.04 12.7 0.1 0.067 12.0 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF112500 - 0.072 13.0 0.3 0.45 10.4 0.2 1.8 1 1 0 2 2 2 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF112500 - 0.088 12.4 1.2 0.28 10.8 1.2 1.7 1 1 0 1 1 1 0 RIO1 family zf-CCCH PF00642.24 ORF1092 - 2.3e-06 27.3 2.0 3.9e-06 26.6 2.0 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF1092 - 0.00014 21.8 8.6 0.00014 21.8 8.6 1.8 2 0 0 2 2 2 1 Zinc finger domain zf-CCCH_4 PF18044.1 ORF1092 - 0.00049 19.8 3.3 0.00089 19.0 3.3 1.5 1 0 0 1 1 1 1 CCCH-type zinc finger Torus PF16131.5 ORF1092 - 0.039 14.6 0.3 0.13 12.9 0.8 1.5 2 0 0 2 2 2 0 Torus domain Cluap1 PF10234.9 ORF109167 - 3.7e-61 206.9 0.1 4.1e-61 206.7 0.1 1.0 1 0 0 1 1 1 1 Clusterin-associated protein-1 Phage_lysozyme PF00959.19 ORF105289 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF105289 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) FGE-sulfatase PF03781.16 ORF105240 - 7.3e-28 97.8 4.7 8.5e-28 97.6 4.7 1.1 1 0 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 Arrestin_N PF00339.29 ORF103892 - 1.4e-14 54.3 0.1 1.9e-14 54.0 0.1 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 ORF103892 - 0.013 15.3 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 Arrestin_N terminal like FA_desaturase PF00487.24 ORF103848 - 2e-09 37.7 5.7 2.8e-09 37.2 5.7 1.1 1 0 0 1 1 1 1 Fatty acid desaturase Imm_superinfect PF14373.6 ORF103848 - 0.041 13.8 1.1 0.095 12.6 0.4 2.0 2 0 0 2 2 2 0 Superinfection immunity protein Flavoprotein PF02441.19 ORF103309 - 9.2e-24 84.0 0.0 1.1e-23 83.7 0.0 1.1 1 0 0 1 1 1 1 Flavoprotein PPR_2 PF13041.6 ORF103099 - 7.7e-21 74.0 0.0 8.6e-06 25.9 0.0 3.3 2 1 1 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF103099 - 1.4e-14 53.8 0.0 2.6e-05 24.2 0.0 3.1 2 1 1 3 3 3 3 Pentatricopeptide repeat domain PPR PF01535.20 ORF103099 - 2.5e-12 46.1 1.3 7.2e-05 22.8 0.0 4.2 4 0 0 4 4 4 3 PPR repeat PPR_1 PF12854.7 ORF103099 - 0.00023 20.8 1.0 0.39 10.4 0.0 4.4 6 0 0 6 6 6 1 PPR repeat PPR_long PF17177.4 ORF103099 - 0.11 11.9 0.0 0.4 10.0 0.0 1.7 1 1 1 2 2 2 0 Pentacotripeptide-repeat region of PRORP TetR_C_20 PF17925.1 ORF103099 - 0.13 12.6 0.1 17 5.7 0.0 2.5 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Fer4_21 PF14697.6 ORF103099 - 1.6 8.9 15.6 1.5 9.0 6.3 2.9 2 2 1 3 3 3 0 4Fe-4S dicluster domain EMP24_GP25L PF01105.24 ORF10300 - 1.4e-32 113.1 0.0 1.6e-32 112.9 0.0 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD C1q PF00386.21 ORF10300 - 0.057 13.6 0.2 0.074 13.3 0.2 1.2 1 0 0 1 1 1 0 C1q domain Vac_Fusion PF02346.16 ORF102608 - 0.19 11.4 0.1 0.68 9.6 0.0 1.9 2 0 0 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 DUF5531 PF17671.1 ORF10192 - 0.018 14.9 0.0 0.026 14.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5531) START PF01852.19 ORF101904 - 8.7e-07 28.5 0.0 1.3e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 START domain Phtf-FEM1B_bdg PF12129.8 NODE_37815_length_562_cov_1.656546_g30536_i0forward_frame_1 - 0.012 15.5 1.1 0.012 15.5 1.1 1.7 2 0 0 2 2 2 0 Male germ-cell putative homeodomain transcription factor PDDEXK_6 PF04720.12 NODE_37813_length_562_cov_2.166983_g30534_i0reverse_frame_1 - 0.14 12.1 0.4 0.23 11.4 0.4 1.3 1 0 0 1 1 1 0 PDDEXK-like family of unknown function NADH-G_4Fe-4S_3 PF10588.9 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_1 - 6.1e-16 57.7 0.2 1.4e-15 56.5 0.2 1.7 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer2_4 PF13510.6 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_1 - 7.4e-13 48.4 0.0 1.4e-12 47.4 0.0 1.5 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2 PF00111.27 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_1 - 1.1e-10 41.4 1.4 4.5e-10 39.3 0.2 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Opy2 PF09463.10 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_1 - 0.15 12.4 4.0 0.25 11.7 0.7 2.5 2 0 0 2 2 2 0 Opy2 protein HisKA PF00512.25 NODE_37806_length_562_cov_3.872865_g30527_i0forward_frame_1 - 1.9e-10 40.6 1.0 4.8e-10 39.3 0.0 2.2 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain zf-C6H2 PF15801.5 NODE_37805_length_562_cov_21.502846_g30526_i0reverse_frame_1 - 0.069 13.5 1.5 0.12 12.7 1.5 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding HTH_52 PF18576.1 NODE_37805_length_562_cov_21.502846_g30526_i0reverse_frame_1 - 0.15 12.3 0.0 0.39 11.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1639 PF07797.14 NODE_37802_length_562_cov_68.254269_g30523_i0reverse_frame_1 - 0.029 14.3 0.4 0.059 13.3 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) Sacchrp_dh_NADP PF03435.18 NODE_37800_length_562_cov_77.459203_g30521_i0reverse_frame_1 - 0.018 15.3 0.0 0.023 15.0 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Dynamin_M PF01031.20 NODE_37793_length_562_cov_94.802657_g30514_i0reverse_frame_1 - 4.9e-39 134.3 0.3 6.6e-39 133.8 0.3 1.2 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 NODE_37793_length_562_cov_94.802657_g30514_i0reverse_frame_1 - 9.8e-14 51.8 0.1 2.5e-13 50.4 0.0 1.6 2 0 0 2 2 2 1 Dynamin family PH_RBD PF12068.8 NODE_37793_length_562_cov_94.802657_g30514_i0reverse_frame_1 - 0.018 14.5 0.0 0.025 14.1 0.0 1.2 1 0 0 1 1 1 0 Rab-binding domain (RBD) Baculo_p74 PF04583.12 NODE_37793_length_562_cov_94.802657_g30514_i0reverse_frame_1 - 0.094 12.2 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae p74 conserved region NHR2 PF08788.11 NODE_37782_length_562_cov_155.798861_g30503_i0forward_frame_1 - 0.094 12.5 4.4 0.15 11.8 0.9 2.3 2 0 0 2 2 2 0 NHR2 domain like RNase_J_C PF17770.1 NODE_37766_length_562_cov_11221.518027_g30488_i0forward_frame_1 - 0.32 12.1 4.1 0.36 11.9 1.2 2.2 2 0 0 2 2 2 0 Ribonuclease J C-terminal domain Meth_synt_1 PF08267.12 NODE_37765_length_562_cov_13264.702087_g21013_i9forward_frame_1 - 0.13 11.7 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 Cobalamin-independent synthase, N-terminal domain Ion_trans_2 PF07885.16 NODE_37763_length_563_cov_2.469697_g30486_i0reverse_frame_1 - 3.5e-13 49.3 6.7 8.4e-13 48.1 6.7 1.7 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 NODE_37763_length_563_cov_2.469697_g30486_i0reverse_frame_1 - 4.3e-10 39.2 8.2 6.3e-10 38.7 8.2 1.2 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 NODE_37763_length_563_cov_2.469697_g30486_i0reverse_frame_1 - 0.16 11.8 0.8 0.26 11.1 0.7 1.5 1 1 0 1 1 1 0 Ligand-gated ion channel GATase PF00117.28 NODE_37757_length_563_cov_3.556818_g30480_i0forward_frame_1 - 6.2e-33 114.2 0.0 8.1e-33 113.8 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CTP_synth_N PF06418.14 NODE_37757_length_563_cov_3.556818_g30480_i0forward_frame_1 - 4.1e-08 32.9 0.0 6.6e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 CTP synthase N-terminus Peptidase_C26 PF07722.13 NODE_37757_length_563_cov_3.556818_g30480_i0forward_frame_1 - 0.045 13.5 0.0 0.24 11.1 0.0 1.9 2 0 0 2 2 2 0 Peptidase C26 zf-rbx1 PF12678.7 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.00016 21.9 0.7 0.00016 21.9 0.7 1.9 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.00098 19.4 0.4 0.0022 18.3 0.4 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.0039 17.0 0.5 0.0075 16.1 0.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.09 12.5 0.1 0.2 11.4 0.1 1.6 1 0 0 1 1 1 0 RING-like zinc finger DUF1935 PF09149.10 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.11 12.9 0.4 1.1 9.7 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1935) Zn_ribbon_17 PF17120.5 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.18 11.4 1.3 0.21 11.2 0.4 1.6 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type Jnk-SapK_ap_N PF09744.9 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.015 15.5 15.0 0.015 15.5 15.0 3.1 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 TMF_DNA_bd PF12329.8 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.017 15.1 46.9 0.15 12.1 7.0 4.2 2 1 1 4 4 4 0 TATA element modulatory factor 1 DNA binding KLRAQ PF10205.9 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.064 13.5 2.3 0.064 13.5 2.3 3.8 3 1 0 3 3 3 0 Predicted coiled-coil domain-containing protein Lebercilin PF15619.6 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.07 12.8 38.0 0.17 11.6 25.4 2.2 1 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease PhoU PF01895.19 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.12 12.8 0.8 0.12 12.8 0.8 3.7 2 2 1 4 4 4 0 PhoU domain SOGA PF11365.8 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.24 12.6 24.7 1.7 9.8 8.7 3.0 2 1 1 3 3 3 0 Protein SOGA AAA_13 PF13166.6 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.63 8.6 29.4 0.0072 15.0 21.0 1.7 2 0 0 2 2 2 0 AAA domain FlxA PF14282.6 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.84 9.7 26.2 0.7 9.9 8.7 4.0 1 1 1 3 3 3 0 FlxA-like protein TPR_MLP1_2 PF07926.12 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 1.1 9.3 30.6 0.25 11.4 12.2 3.1 3 0 0 3 3 3 0 TPR/MLP1/MLP2-like protein MACPF PF01823.19 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 1.5 8.9 7.8 4.1 7.4 7.8 1.9 1 1 0 1 1 1 0 MAC/Perforin domain Bacillus_HBL PF05791.11 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 2.3 8.0 20.1 2.6 7.9 2.0 3.7 1 1 2 3 3 3 0 Bacillus haemolytic enterotoxin (HBL) ADIP PF11559.8 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 2.5 8.2 36.3 1.8 8.6 13.4 3.5 1 1 1 3 3 3 0 Afadin- and alpha -actinin-Binding DUF4407 PF14362.6 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 2.9 7.2 18.3 4 6.7 9.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) NRBF2 PF08961.10 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 3.3 7.3 20.8 0.12 12.0 7.3 2.8 1 1 2 3 3 3 0 Nuclear receptor-binding factor 2, autophagy regulator UPF0242 PF06785.11 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 3.3 7.8 39.9 0.078 13.1 16.4 3.0 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus Prefoldin_2 PF01920.20 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 3.7 7.6 35.2 1 9.3 14.0 3.9 2 1 1 3 3 3 0 Prefoldin subunit Halogen_Hydrol PF10112.9 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 3.8 7.5 21.8 0.61 10.1 13.9 2.8 1 1 1 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DASH_Hsk3 PF08227.11 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 5.5 7.4 7.2 43 4.6 0.2 3.6 3 0 0 3 3 3 0 DASH complex subunit Hsk3 like Tropomyosin_1 PF12718.7 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 6.3 7.0 38.6 3 8.0 11.7 3.5 1 1 2 3 3 3 0 Tropomyosin like ZapB PF06005.12 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 6.3 7.3 39.2 3.6 8.1 3.8 4.2 3 1 1 4 4 4 0 Cell division protein ZapB ERM PF00769.19 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 8.4 6.1 34.6 42 3.8 34.6 2.7 1 1 0 1 1 1 0 Ezrin/radixin/moesin family DivIC PF04977.15 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 8.6 6.2 33.5 0.5 10.2 2.6 4.4 2 1 2 4 4 4 0 Septum formation initiator DUF1943 PF09172.11 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 9.2 5.4 11.3 1.2 8.3 6.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF1943) YjbH PF06082.11 NODE_37715_length_564_cov_1.986767_g30440_i0reverse_frame_1 - 6e-78 263.3 2.7 6.6e-78 263.2 2.7 1.0 1 0 0 1 1 1 1 Exopolysaccharide biosynthesis protein YbjH zf-RING_5 PF14634.6 NODE_37705_length_564_cov_4.319471_g30430_i0reverse_frame_1 - 0.026 14.5 0.1 0.046 13.7 0.1 1.3 1 0 0 1 1 1 0 zinc-RING finger domain Fer4_7 PF12838.7 NODE_37705_length_564_cov_4.319471_g30430_i0reverse_frame_1 - 0.036 14.6 0.6 0.071 13.7 0.6 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain GerD PF17898.1 NODE_37703_length_564_cov_4.899811_g30429_i0forward_frame_1 - 0.0044 16.9 2.5 0.011 15.7 2.5 1.6 1 0 0 1 1 1 1 Spore germination GerD central core domain RRM_1 PF00076.22 NODE_37702_length_564_cov_23.217391_g30428_i0forward_frame_1 - 3.4e-11 42.8 0.4 3.3e-10 39.6 0.2 2.2 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 NODE_37702_length_564_cov_23.217391_g30428_i0forward_frame_1 - 0.091 12.8 0.3 0.19 11.8 0.3 1.5 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Co_AT_N PF12557.8 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_1 - 5.5 7.0 6.8 8.2 6.5 1.1 2.6 2 0 0 2 2 2 0 Cob(I)alamin adenosyltransferase N terminal RCC1 PF00415.18 NODE_37673_length_564_cov_245.638941_g30400_i0forward_frame_1 - 4.3e-28 97.7 0.0 7.3e-12 45.7 0.0 3.1 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_37673_length_564_cov_245.638941_g30400_i0forward_frame_1 - 4e-18 64.7 0.4 8e-07 28.7 0.0 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PP_kinase_C_1 PF17941.1 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 1.5e-45 154.7 0.1 2.2e-45 154.2 0.1 1.2 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain 1 PP_kinase PF02503.17 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 9e-13 48.3 0.0 1.4e-12 47.7 0.0 1.3 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PLDc_2 PF13091.6 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 0.00094 19.1 0.0 0.0015 18.4 0.0 1.4 1 0 0 1 1 1 1 PLD-like domain MR_MLE_C PF13378.6 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 0.005 16.4 0.1 0.007 15.9 0.1 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like Pyr_redox PF00070.27 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 0.13 12.8 0.0 0.26 11.9 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MAD PF05557.13 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.0034 15.8 21.0 0.0039 15.6 21.0 1.0 1 0 0 1 1 1 1 Mitotic checkpoint protein MscS_porin PF12795.7 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.01 15.4 22.4 0.01 15.4 22.4 1.9 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain MRP-S27 PF10037.9 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.056 12.3 9.9 0.064 12.1 9.9 1.1 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 DAP_B PF07930.12 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.18 11.8 3.4 0.26 11.2 3.4 1.3 1 0 0 1 1 1 0 D-aminopeptidase, domain B TPR_1 PF00515.28 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.2 11.5 2.3 13 5.8 0.4 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat Rx_N PF18052.1 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.39 11.0 12.4 0.43 10.9 10.7 2.1 1 1 1 2 2 2 0 Rx N-terminal domain Atg14 PF10186.9 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 2.9 6.9 11.5 1.2 8.2 9.4 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 XhlA PF10779.9 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 3 8.1 8.3 23 5.3 6.6 2.4 1 1 1 2 2 2 0 Haemolysin XhlA PKcGMP_CC PF16808.5 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 4.1 7.4 11.5 2.8 7.9 1.0 3.3 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF3701 PF12482.8 NODE_37647_length_565_cov_3.192453_g30381_i0forward_frame_2 - 0.017 15.2 0.4 0.03 14.4 0.4 1.4 1 0 0 1 1 1 0 Phage integrase protein DUF2353 PF09789.9 NODE_37646_length_565_cov_3.398113_g30380_i1forward_frame_3 - 0.013 14.9 0.1 0.015 14.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) LcrG PF07216.12 NODE_37646_length_565_cov_3.398113_g30380_i1forward_frame_3 - 0.11 12.4 0.9 0.18 11.7 0.9 1.3 1 0 0 1 1 1 0 LcrG protein DUF3138 PF11336.8 NODE_37646_length_565_cov_3.398113_g30380_i1forward_frame_3 - 0.14 10.8 0.2 0.19 10.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) DUF2353 PF09789.9 NODE_37645_length_565_cov_3.473585_g30380_i0reverse_frame_3 - 0.0081 15.6 0.1 0.0098 15.3 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized coiled-coil protein (DUF2353) LcrG PF07216.12 NODE_37645_length_565_cov_3.473585_g30380_i0reverse_frame_3 - 0.1 12.5 1.5 0.17 11.8 1.5 1.3 1 0 0 1 1 1 0 LcrG protein AsmA PF05170.14 NODE_37644_length_565_cov_3.584906_g30379_i0forward_frame_3 - 9e-51 173.4 2.9 1e-50 173.2 2.9 1.0 1 0 0 1 1 1 1 AsmA family AsmA_2 PF13502.6 NODE_37644_length_565_cov_3.584906_g30379_i0forward_frame_3 - 2e-16 60.2 1.8 2.5e-16 59.9 1.8 1.1 1 0 0 1 1 1 1 AsmA-like C-terminal region Nuc_sug_transp PF04142.15 NODE_37629_length_565_cov_121.196226_g30364_i0reverse_frame_3 - 1.2e-41 143.0 8.4 1.5e-41 142.6 8.4 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF3197 PF11432.8 NODE_37629_length_565_cov_121.196226_g30364_i0forward_frame_3 - 0.079 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3197) Ebola_NP PF05505.12 NODE_37624_length_565_cov_136.315094_g30360_i0reverse_frame_3 - 0.049 11.9 0.2 0.062 11.6 0.2 1.1 1 0 0 1 1 1 0 Ebola nucleoprotein DUF2721 PF11026.8 NODE_37624_length_565_cov_136.315094_g30360_i0reverse_frame_3 - 0.14 12.1 0.4 0.22 11.4 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) SAM_1 PF00536.30 NODE_37621_length_565_cov_158.145283_g14262_i1forward_frame_3 - 0.047 14.1 0.0 0.08 13.4 0.0 1.4 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) CBM_1 PF00734.18 NODE_37604_length_565_cov_1602.916981_g30341_i0forward_frame_3 - 1.2e-11 44.3 13.6 1.2e-11 44.3 13.6 2.2 2 0 0 2 2 2 1 Fungal cellulose binding domain Toxin_7 PF05980.12 NODE_37604_length_565_cov_1602.916981_g30341_i0forward_frame_3 - 0.025 14.8 8.5 0.025 14.8 8.5 1.8 2 0 0 2 2 2 0 Toxin 7 Insulin_TMD PF17870.1 NODE_37602_length_566_cov_2.214689_g30339_i0forward_frame_3 - 0.021 14.9 1.1 0.03 14.4 0.1 1.9 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment CYYR1 PF10873.8 NODE_37602_length_566_cov_2.214689_g30339_i0forward_frame_3 - 0.046 14.2 4.0 0.063 13.7 4.0 1.2 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 DUF2374 PF09574.10 NODE_37600_length_566_cov_2.525424_g30337_i0forward_frame_3 - 0.046 13.5 0.8 0.092 12.6 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (Duf2374) DUF1293 PF06950.11 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_3 - 0.2 11.8 0.0 0.32 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1293) ABC_tran PF00005.27 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 1.1e-29 103.7 0.0 1.3e-29 103.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 6e-05 23.3 0.0 0.00017 21.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.00053 19.9 0.1 0.047 13.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.0024 17.8 0.2 0.0051 16.7 0.2 1.4 1 1 1 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.0029 17.7 0.0 0.0038 17.3 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_16 PF13191.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.0034 17.8 0.1 0.0045 17.4 0.1 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.005 17.1 0.0 0.078 13.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.006 16.2 0.4 0.022 14.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.012 15.3 0.0 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.016 14.7 0.0 3.7 6.9 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_33 PF13671.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.09 12.9 0.0 0.16 12.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain DLIC PF05783.11 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.11 11.4 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) NB-ARC PF00931.22 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.18 10.9 0.0 0.41 9.8 0.0 1.6 2 0 0 2 2 2 0 NB-ARC domain ABC_ATPase PF09818.9 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.25 10.1 0.0 4.1 6.1 0.1 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class DUF2185 PF09951.9 NODE_37594_length_566_cov_3.472693_g30331_i0forward_frame_3 - 0.0029 17.4 0.0 0.0064 16.3 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2185) NapB PF03892.14 NODE_37594_length_566_cov_3.472693_g30331_i0forward_frame_3 - 0.048 13.7 0.0 0.069 13.2 0.0 1.1 1 0 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) DUF5073 PF16817.5 NODE_37594_length_566_cov_3.472693_g30331_i0forward_frame_3 - 0.12 12.5 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5073) TOM20_plant PF06552.12 NODE_37588_length_566_cov_77.248588_g9762_i2reverse_frame_3 - 0.056 13.2 0.1 0.078 12.7 0.1 1.2 1 0 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 DUF4094 PF13334.6 NODE_37588_length_566_cov_77.248588_g9762_i2reverse_frame_3 - 0.18 12.2 3.7 0.34 11.3 2.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) Cadherin_C_2 PF16492.5 NODE_37586_length_566_cov_78.305085_g30244_i1reverse_frame_2 - 0.28 12.0 0.4 0.28 12.0 0.4 2.5 2 1 0 2 2 2 0 Cadherin cytoplasmic C-terminal CPSase_L_D3 PF02787.19 NODE_37586_length_566_cov_78.305085_g30244_i1forward_frame_3 - 0.01 16.2 0.2 0.024 15.0 0.2 1.7 1 1 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain V_ATPase_I PF01496.19 NODE_37585_length_566_cov_79.969868_g30324_i0forward_frame_3 - 0.04 11.9 0.3 0.046 11.6 0.3 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NtCtMGAM_N PF16863.5 NODE_37583_length_566_cov_86.629002_g30322_i0forward_frame_3 - 8e-06 26.0 0.0 1.2e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase Cpn60_TCP1 PF00118.24 NODE_37571_length_566_cov_174.792844_g30311_i0reverse_frame_2 - 5.3e-45 154.0 0.0 6.6e-45 153.6 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Knl1_RWD_C PF18210.1 NODE_37571_length_566_cov_174.792844_g30311_i0reverse_frame_2 - 0.096 13.2 0.0 0.16 12.5 0.0 1.4 1 0 0 1 1 1 0 Knl1 RWD C-terminal domain Methyltransf_11 PF08241.12 NODE_37566_length_566_cov_260.425612_g30306_i0reverse_frame_2 - 2.5e-12 47.3 0.1 4.6e-12 46.4 0.0 1.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_37566_length_566_cov_260.425612_g30306_i0reverse_frame_2 - 1.2e-10 41.9 0.0 2.2e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_37566_length_566_cov_260.425612_g30306_i0reverse_frame_2 - 4e-10 39.7 0.0 5.2e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_37566_length_566_cov_260.425612_g30306_i0reverse_frame_2 - 4.5e-08 33.8 0.0 8e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_37566_length_566_cov_260.425612_g30306_i0reverse_frame_2 - 1.9e-06 27.8 0.0 2.4e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks109.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks109.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks109.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks109.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EF-hand_1 PF00036.32 ORF92157 - 8.4e-16 56.3 10.7 0.00017 20.9 0.2 6.1 6 0 0 6 6 6 3 EF hand EF-hand_7 PF13499.6 ORF92157 - 1.2e-15 57.7 7.3 2.9e-05 24.4 1.0 4.6 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF92157 - 1.9e-15 55.4 6.8 0.00015 21.4 0.2 5.9 5 0 0 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF92157 - 1.2e-12 47.5 2.8 0.0017 18.2 0.0 5.3 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF92157 - 1.1e-06 27.8 6.2 0.12 11.9 0.0 5.0 5 0 0 5 5 5 2 EF hand DUF4031 PF13223.6 ORF92157 - 0.039 14.2 0.0 0.17 12.1 0.0 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4031) DUF1351 PF07083.11 ORF92157 - 0.1 12.4 0.2 0.22 11.3 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1351) DNA_pol_A_exo1 PF01612.20 ORF60873 - 4.1e-07 29.9 0.0 5.8e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 3'-5' exonuclease AroM PF07302.11 ORF60873 - 0.21 10.9 0.0 0.4 10.0 0.0 1.3 1 0 0 1 1 1 0 AroM protein NIF PF03031.18 ORF36534 - 9.1e-44 149.0 0.8 9.1e-44 149.0 0.8 2.0 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase HAD PF12710.7 ORF36534 - 0.01 16.2 0.2 0.061 13.7 0.2 2.0 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase PPR_2 PF13041.6 ORF30069 - 9.7e-70 230.6 5.4 1.2e-10 41.4 0.0 11.3 7 4 5 12 12 12 12 PPR repeat family PPR PF01535.20 ORF30069 - 5.7e-59 192.4 6.9 2.9e-05 24.0 0.0 13.3 13 1 0 13 13 13 11 PPR repeat PPR_3 PF13812.6 ORF30069 - 2.7e-50 168.3 0.0 3.7e-08 33.3 0.0 9.6 4 2 6 10 10 10 9 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF30069 - 5.4e-46 154.0 0.0 6.7e-06 25.7 0.0 13.9 14 0 0 14 14 14 9 PPR repeat PPR_long PF17177.4 ORF30069 - 8.5e-31 107.0 0.1 8.5e-08 31.8 0.0 5.3 3 2 3 6 6 6 5 Pentacotripeptide-repeat region of PRORP TPR_MalT PF17874.1 ORF30069 - 1.6e-07 31.1 7.1 0.00022 20.7 0.8 3.6 1 1 1 3 3 3 2 MalT-like TPR region TPR_4 PF07721.14 ORF30069 - 2.6e-07 30.6 8.7 2.5 9.0 0.1 7.2 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF30069 - 7.3e-05 23.0 7.9 1.4 9.2 0.1 5.4 4 2 1 6 6 6 1 Tetratricopeptide repeat Clathrin PF00637.20 ORF30069 - 0.0012 18.7 0.0 20 5.0 0.1 4.7 1 1 6 7 7 7 0 Region in Clathrin and VPS TPR_10 PF13374.6 ORF30069 - 0.0019 18.0 9.8 1.1 9.2 0.1 5.3 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF30069 - 0.0042 17.6 11.9 10 6.7 0.4 5.9 4 3 1 6 6 6 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF30069 - 0.022 15.6 18.0 15 6.7 0.2 8.3 4 3 5 9 9 9 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF30069 - 0.031 14.9 12.2 0.14 12.9 0.7 5.5 6 0 0 6 6 5 0 Tetratricopeptide repeat Ank_4 PF13637.6 ORF30069 - 0.037 14.6 0.0 0.23 12.1 0.0 2.3 2 0 0 2 2 1 0 Ankyrin repeats (many copies) SelB-wing_2 PF09106.11 ORF30069 - 0.054 13.7 0.5 34 4.7 0.0 4.9 4 1 0 4 4 4 0 Elongation factor SelB, winged helix B12-binding_2 PF02607.17 ORF30069 - 0.089 13.2 0.5 5.3 7.6 0.1 4.0 3 2 1 4 4 4 0 B12 binding domain NTase_sub_bind PF08780.11 ORF30069 - 0.12 12.4 6.4 12 5.9 0.1 4.9 3 2 1 5 5 5 0 Nucleotidyltransferase substrate binding protein like TPR_8 PF13181.6 ORF30069 - 0.14 12.5 9.3 7.2 7.1 0.1 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF30069 - 0.19 11.8 5.4 29 5.0 0.1 4.9 5 0 0 5 5 4 0 Tetratricopeptide repeat YscO PF07321.12 ORF30069 - 0.37 10.7 3.5 0.41 10.6 0.8 2.2 2 0 0 2 2 2 0 Type III secretion protein YscO TPR_11 PF13414.6 ORF30069 - 3.6 7.4 11.5 54 3.6 0.3 5.0 5 0 0 5 5 5 0 TPR repeat Disintegrin PF00200.23 ORF21262 - 5.8e-25 87.9 65.0 1.1e-14 54.9 28.4 6.5 5 2 0 5 5 5 2 Disintegrin Peptidase_M50 PF02163.22 NODE_4982_length_1730_cov_89.589381_g3585_i1forward_frame_2 - 4.2 6.6 6.5 0.8 8.9 2.7 1.6 2 0 0 2 2 2 0 Peptidase family M50 DUF1772 PF08592.11 ORF53066 - 0.29 11.4 5.7 0.93 9.8 0.3 3.5 2 1 2 4 4 4 0 Domain of unknown function (DUF1772) EF-hand_1 PF00036.32 ORF44544 - 2.7e-13 48.4 4.4 5.2e-07 28.8 1.5 2.8 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF44544 - 2.6e-07 29.9 3.0 8.8e-05 21.8 0.8 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF44544 - 2.8e-07 30.3 0.8 0.00021 21.1 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF44544 - 4.9e-07 30.1 2.1 4.9e-07 30.1 2.1 2.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF44544 - 2.6e-06 26.9 11.8 6.5e-05 22.6 0.9 3.2 3 0 0 3 3 3 2 EF-hand domain DUF1359 PF07097.11 ORF44544 - 0.0039 17.4 2.0 2.1 8.6 0.1 3.1 3 0 0 3 3 3 2 Protein of unknown function (DUF1359) EF-hand_4 PF12763.7 ORF44544 - 0.21 11.6 5.0 0.59 10.1 0.0 3.1 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand Oxidored_molyb PF00174.19 ORF3554 - 1.2e-51 174.8 0.0 2.4e-51 173.8 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 ORF3554 - 2.6e-42 144.1 0.6 4.6e-42 143.3 0.6 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain Cyt-b5 PF00173.28 ORF3554 - 8.2e-15 54.7 0.4 5.6e-14 52.0 0.0 2.5 3 0 0 3 3 3 1 Cytochrome b5-like Heme/Steroid binding domain HECT PF00632.25 ORF26735 - 9.7e-68 228.9 0.0 1.8e-67 228.0 0.0 1.3 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Ank_4 PF13637.6 ORF26735 - 2.1e-12 47.3 2.0 0.0093 16.5 0.1 4.6 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF26735 - 7.6e-12 45.1 2.0 0.003 17.9 0.0 4.6 4 0 0 4 4 4 4 Ankyrin repeat Ank_2 PF12796.7 ORF26735 - 1.3e-07 32.1 1.3 0.00067 20.2 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF26735 - 1.1e-06 28.8 0.4 0.002 18.4 0.1 3.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF26735 - 0.00023 21.4 0.9 5.4 7.9 0.0 4.5 4 0 0 4 4 4 1 Ankyrin repeat DUF2509 PF10713.9 ORF26735 - 0.031 14.4 0.0 0.077 13.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2509) Alpha_kinase PF02816.18 ORF9334 - 2.8e-37 128.6 0.9 4.5e-37 128.0 0.9 1.3 1 0 0 1 1 1 1 Alpha-kinase family MctB PF11382.8 ORF9334 - 0.092 12.4 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB Kinesin PF00225.23 ORF89654 - 3e-115 384.7 0.6 3e-115 384.7 0.6 2.6 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF89654 - 2e-26 92.7 0.2 2e-26 92.7 0.2 2.6 2 1 0 2 2 2 1 Microtubule binding RII_binding_1 PF10522.9 ORF89654 - 0.035 14.3 0.1 0.14 12.5 0.1 2.1 1 0 0 1 1 1 0 RII binding domain Kinesin PF00225.23 ORF65197 - 3e-115 384.7 0.6 3e-115 384.7 0.6 2.6 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF65197 - 2e-26 92.7 0.2 2e-26 92.7 0.2 2.6 2 1 0 2 2 2 1 Microtubule binding RII_binding_1 PF10522.9 ORF65197 - 0.035 14.3 0.1 0.14 12.5 0.1 2.1 1 0 0 1 1 1 0 RII binding domain Aminotran_1_2 PF00155.21 ORF62494 - 5e-29 101.6 0.0 8.1e-29 100.9 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Zeta_toxin PF06414.12 ORF62494 - 4.4e-20 71.8 0.0 7.5e-20 71.0 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin ATPase_2 PF01637.18 ORF62494 - 0.028 14.3 0.1 0.085 12.8 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Aminotran_MocR PF12897.7 ORF62494 - 0.063 12.1 0.0 0.098 11.4 0.0 1.2 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase AAA_33 PF13671.6 ORF62494 - 0.13 12.4 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain CPT PF07931.12 ORF62494 - 0.15 11.9 0.0 0.62 9.9 0.0 1.9 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein Kinesin PF00225.23 ORF54089 - 3e-115 384.7 0.6 3e-115 384.7 0.6 2.6 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF54089 - 2e-26 92.7 0.2 2e-26 92.7 0.2 2.6 2 1 0 2 2 2 1 Microtubule binding RII_binding_1 PF10522.9 ORF54089 - 0.035 14.3 0.1 0.14 12.5 0.1 2.1 1 0 0 1 1 1 0 RII binding domain Adaptin_N PF01602.20 ORF37678 - 1.4e-17 63.5 7.1 3.7e-17 62.1 7.1 1.7 1 1 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF37678 - 7.6e-06 26.1 7.4 0.0037 17.3 0.0 4.8 4 1 1 5 5 5 2 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 ORF37678 - 0.0043 17.2 0.0 1.5 9.3 0.0 3.7 3 0 0 3 3 3 1 HEAT repeat HEAT_2 PF13646.6 ORF37678 - 0.036 14.5 0.0 0.17 12.3 0.0 2.2 2 0 0 2 2 2 0 HEAT repeats Peptidase_S46 PF10459.9 ORF19372 - 1.4e-128 430.5 0.0 1.6e-128 430.3 0.0 1.0 1 0 0 1 1 1 1 Peptidase S46 Trypsin_2 PF13365.6 ORF19372 - 2.8e-06 28.3 0.1 0.00048 21.1 0.0 2.3 2 0 0 2 2 2 1 Trypsin-like peptidase domain DUF31 PF01732.16 ORF19372 - 0.0011 18.6 0.1 0.0086 15.7 0.0 1.9 2 0 0 2 2 2 1 Putative peptidase (DUF31) Trypsin PF00089.26 ORF19372 - 0.01 15.7 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Trypsin Peptidase_S7 PF00949.21 ORF19372 - 0.016 15.0 0.0 0.041 13.7 0.0 1.6 2 0 0 2 2 2 0 Peptidase S7, Flavivirus NS3 serine protease Peptidase_S32 PF05579.13 ORF19372 - 0.14 11.3 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 Equine arteritis virus serine endopeptidase S32 PDEase_I PF00233.19 ORF107380 - 3.4e-76 256.1 0.2 3.4e-76 256.1 0.2 2.0 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase SMI1_KNR4 PF09346.10 ORF107380 - 0.072 13.5 1.3 0.14 12.6 0.2 2.0 2 0 0 2 2 2 0 SMI1 / KNR4 family (SUKH-1) Cyclin_N PF00134.23 ORF107380 - 0.085 12.6 0.1 2.5 7.8 0.0 2.7 2 0 0 2 2 2 0 Cyclin, N-terminal domain H_PPase PF03030.16 ORF72670 - 4.8e-201 669.8 17.2 5.9e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase AAA_30 PF13604.6 ORF4992 - 8.9e-17 61.4 0.0 1.5e-16 60.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF4992 - 4.3e-07 29.9 0.1 0.00079 19.2 0.0 2.3 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 ORF4992 - 7e-07 29.7 0.2 6.8e-05 23.2 0.2 2.4 1 1 0 1 1 1 1 AAA domain PIF1 PF05970.14 ORF4992 - 8.1e-05 21.9 0.0 0.0015 17.7 0.0 2.2 2 0 0 2 2 2 1 PIF1-like helicase AAA_22 PF13401.6 ORF4992 - 0.00013 22.3 0.1 0.00044 20.5 0.1 1.7 1 1 1 2 2 2 1 AAA domain KTI12 PF08433.10 ORF4992 - 0.00019 21.0 0.0 0.00031 20.3 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 ORF4992 - 0.00021 21.7 0.1 0.00054 20.4 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF4992 - 0.00021 21.4 0.0 0.012 15.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 ORF4992 - 0.00069 19.5 0.1 0.44 10.3 0.0 2.2 1 1 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 ORF4992 - 0.00078 18.9 0.0 0.0013 18.2 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 ORF4992 - 0.0013 18.8 0.0 0.0031 17.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF4992 - 0.002 17.9 0.1 0.0036 17.0 0.1 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein GvpD PF07088.11 ORF4992 - 0.0023 16.7 0.0 0.0033 16.1 0.0 1.1 1 0 0 1 1 1 1 GvpD gas vesicle protein AAA PF00004.29 ORF4992 - 0.0032 17.9 0.0 0.0054 17.1 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MobB PF03205.14 ORF4992 - 0.0034 17.3 0.1 0.0064 16.4 0.1 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 ORF4992 - 0.0046 16.9 0.1 0.0084 16.0 0.1 1.4 1 0 0 1 1 1 1 NTPase Zeta_toxin PF06414.12 ORF4992 - 0.0049 16.2 0.0 0.0089 15.3 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin MeaB PF03308.16 ORF4992 - 0.0059 15.6 0.0 0.0092 15.0 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 ORF4992 - 0.018 15.6 0.0 0.048 14.2 0.0 1.8 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 ORF4992 - 0.021 14.8 0.0 0.046 13.6 0.0 1.6 1 0 0 1 1 1 0 NACHT domain TsaE PF02367.17 ORF4992 - 0.03 14.3 0.0 0.25 11.4 0.0 2.1 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 ORF4992 - 0.054 13.1 0.0 0.091 12.3 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 ORF4992 - 0.06 12.6 0.0 0.089 12.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TrwB_AAD_bind PF10412.9 ORF4992 - 0.061 12.2 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain APS_kinase PF01583.20 ORF4992 - 0.15 12.0 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase ATPase PF06745.13 ORF4992 - 0.19 11.1 0.0 0.32 10.3 0.0 1.3 1 0 0 1 1 1 0 KaiC Cor1 PF04803.12 ORF27654 - 0.4 10.9 9.2 0.062 13.5 4.4 2.0 1 1 1 2 2 2 0 Cor1/Xlr/Xmr conserved region WD40 PF00400.32 ORF10725 - 4.5e-10 40.0 0.4 0.84 10.6 0.0 5.8 6 0 0 6 6 6 4 WD domain, G-beta repeat Nup160 PF11715.8 ORF10725 - 0.00034 19.4 0.0 0.67 8.5 0.0 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 PQQ_2 PF13360.6 ORF10725 - 0.0046 16.6 0.6 0.18 11.4 0.0 2.5 2 1 0 2 2 2 1 PQQ-like domain Dynamin_M PF01031.20 ORF90853 - 2e-79 266.8 0.0 2.6e-79 266.4 0.0 1.1 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 ORF90853 - 3.6e-47 160.6 0.0 6.9e-47 159.6 0.0 1.5 1 0 0 1 1 1 1 Dynamin family GED PF02212.18 ORF90853 - 5.3e-07 29.7 0.2 1.7e-06 28.1 0.0 2.0 2 0 0 2 2 2 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 ORF90853 - 3e-05 24.1 0.0 0.0001 22.4 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase Taeniidae_ag PF05596.11 ORF90853 - 0.022 14.7 0.1 0.09 12.8 0.1 2.1 1 0 0 1 1 1 0 Taeniidae antigen NFACT-C PF11923.8 ORF74097 - 7.2e-19 67.7 0.0 7.2e-19 67.7 0.0 5.2 2 1 1 3 3 3 1 NFACT protein C-terminal domain NFACT-R_1 PF05670.13 ORF74097 - 1.1e-09 39.0 0.0 1.1e-09 39.0 0.0 2.5 2 1 0 2 2 2 1 NFACT protein RNA binding domain FHA PF00498.26 ORF5332 - 2.3e-14 53.5 0.0 4.5e-14 52.6 0.0 1.5 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF5332 - 6.3e-09 36.0 0.2 6.3e-08 32.8 0.0 2.4 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain WW PF00397.26 ORF5332 - 3.6e-05 23.8 2.1 7.4e-05 22.8 2.1 1.6 1 0 0 1 1 1 1 WW domain Ntox34 PF15606.6 ORF32637 - 1.1e-42 144.0 0.6 1.9e-42 143.3 0.6 1.4 1 0 0 1 1 1 1 Bacterial toxin 34 RHS PF03527.14 ORF32637 - 1.9e-14 53.1 0.4 5.8e-14 51.6 0.4 1.9 1 0 0 1 1 1 1 RHS protein RHS_repeat PF05593.14 ORF32637 - 2.8e-11 43.7 34.6 9.5e-08 32.4 5.5 7.7 8 2 1 9 9 9 2 RHS Repeat OCRE PF17780.1 ORF32637 - 2.4 8.2 12.0 0.12 12.4 2.7 3.2 2 1 0 2 2 2 0 OCRE domain Dynamin_M PF01031.20 ORF21236 - 2e-79 266.8 0.0 2.6e-79 266.4 0.0 1.1 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 ORF21236 - 3.6e-47 160.6 0.0 6.9e-47 159.6 0.0 1.5 1 0 0 1 1 1 1 Dynamin family GED PF02212.18 ORF21236 - 5.3e-07 29.7 0.2 1.7e-06 28.1 0.0 2.0 2 0 0 2 2 2 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 ORF21236 - 3e-05 24.1 0.0 0.0001 22.4 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase Taeniidae_ag PF05596.11 ORF21236 - 0.022 14.7 0.1 0.09 12.8 0.1 2.1 1 0 0 1 1 1 0 Taeniidae antigen ABC_tran PF00005.27 ORF104767 - 2.4e-09 37.8 0.0 1.3e-08 35.5 0.0 2.1 1 1 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF104767 - 1.7e-05 24.6 6.1 2.4e-05 24.2 6.1 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region Ion_trans PF00520.31 ORF96266 - 4.5e-20 71.9 7.7 6.3e-20 71.4 7.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF96266 - 7.5e-09 34.8 0.5 0.006 16.4 0.4 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF96266 - 7.9e-09 34.5 3.1 0.0026 17.2 0.1 3.2 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF96266 - 2.5e-08 34.2 9.9 2.9e-07 30.8 2.8 2.7 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF96266 - 1e-07 31.1 3.3 0.0048 16.3 0.0 3.1 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF96266 - 3.6e-05 23.5 3.4 0.023 14.6 0.2 3.3 3 0 0 3 3 3 2 EF-hand domain pair RFamide_26RFa PF11109.8 ORF96266 - 0.051 14.1 0.5 0.1 13.1 0.5 1.5 1 0 0 1 1 1 0 Orexigenic neuropeptide Qrfp/P518 Saccharop_dh_N PF04455.12 ORF96266 - 0.074 13.5 0.1 0.19 12.2 0.1 1.6 1 0 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region EF-hand_9 PF14658.6 ORF96266 - 0.14 12.5 0.4 1 9.7 0.0 2.6 2 1 0 2 2 2 0 EF-hand domain Rogdi_lz PF10259.9 ORF96266 - 0.28 10.6 0.0 0.28 10.6 0.0 2.1 3 0 0 3 3 3 0 Rogdi leucine zipper containing protein EF-hand_4 PF12763.7 ORF96266 - 0.31 11.0 3.4 6.1 6.9 0.2 2.6 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand H_PPase PF03030.16 ORF83006 - 4.7e-201 669.8 17.2 5.8e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF79548 - 4.7e-201 669.8 17.2 5.8e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF77785 - 4.7e-201 669.8 17.2 5.8e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase DHQ_synthase PF01761.20 ORF64253 - 0.059 12.5 0.0 0.12 11.5 0.0 1.5 1 0 0 1 1 1 0 3-dehydroquinate synthase H_PPase PF03030.16 ORF54161 - 4.7e-201 669.8 17.2 5.8e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF52916 - 4.7e-201 669.8 17.2 5.8e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase Ion_trans PF00520.31 ORF46283 - 7.6e-13 48.2 19.0 3.8e-12 46.0 19.0 2.0 1 1 0 1 1 1 1 Ion transport protein EF-hand_8 PF13833.6 ORF46283 - 1.4e-06 28.0 0.2 0.0055 16.5 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF46283 - 3.7e-06 26.1 1.6 0.011 15.2 0.2 2.9 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF46283 - 3.3e-05 23.5 2.7 0.15 12.1 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF46283 - 3.6e-05 24.1 0.1 9.2e-05 22.8 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF46283 - 0.89 9.2 3.1 3.2 7.4 0.1 2.8 3 0 0 3 3 3 0 EF hand H_PPase PF03030.16 ORF44444 - 4.7e-201 669.8 17.2 5.8e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF43799 - 4.7e-201 669.8 17.2 5.8e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase tRNA-synt_2b PF00587.25 ORF41045 - 5.1e-49 166.7 0.0 7.2e-49 166.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA_edit PF04073.15 ORF41045 - 8.1e-27 93.7 0.1 1.6e-26 92.8 0.1 1.5 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain HGTP_anticodon PF03129.20 ORF41045 - 1.9e-21 76.0 0.1 4.1e-21 74.9 0.1 1.6 1 0 0 1 1 1 1 Anticodon binding domain TIR_2 PF13676.6 ORF41045 - 0.12 13.0 0.0 0.35 11.5 0.0 1.8 1 0 0 1 1 1 0 TIR domain H_PPase PF03030.16 ORF34189 - 4.7e-201 669.8 17.2 5.8e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF31536 - 4.7e-201 669.8 17.2 5.8e-201 669.5 17.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase Peptidase_C14 PF00656.22 ORF11694 - 1.5e-10 41.4 0.1 6e-10 39.5 0.0 1.9 2 0 0 2 2 2 1 Caspase domain Prok-RING_4 PF14447.6 NODE_5187_length_1711_cov_12.841289_g3736_i0forward_frame_1 - 0.3 11.0 7.0 0.63 9.9 7.0 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 ATP-grasp_4 PF13535.6 NODE_5173_length_1712_cov_14.084079_g3285_i1reverse_frame_1 - 0.0055 16.3 0.0 0.0097 15.5 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-gua_Ptrans PF00217.19 ORF45196 - 9.5e-40 136.3 0.0 1.7e-32 112.7 0.0 2.2 2 0 0 2 2 2 2 ATP:guanido phosphotransferase, C-terminal catalytic domain ATP-gua_PtransN PF02807.15 ORF45196 - 2.2e-13 50.4 0.1 2.7e-06 27.7 0.0 2.6 2 0 0 2 2 2 2 ATP:guanido phosphotransferase, N-terminal domain CALCOCO1 PF07888.11 ORF39113 - 0.0016 17.4 12.5 0.0016 17.4 12.5 2.3 1 1 1 2 2 2 1 Calcium binding and coiled-coil domain (CALCOCO1) like GAS PF13851.6 ORF39113 - 0.0057 16.0 16.9 0.0057 16.0 16.9 3.5 1 1 1 3 3 3 1 Growth-arrest specific micro-tubule binding Exonuc_VII_S PF02609.16 ORF39113 - 0.055 13.5 0.3 0.055 13.5 0.3 3.3 4 0 0 4 4 4 0 Exonuclease VII small subunit Ribosomal_L13 PF00572.18 ORF39113 - 0.065 13.5 1.3 0.098 12.9 0.3 1.9 2 0 0 2 2 2 0 Ribosomal protein L13 Csm2_III-A PF03750.13 ORF39113 - 5.1 8.0 15.4 0.093 13.6 2.1 3.0 2 1 0 2 2 2 0 Csm2 Type III-A TMCO5 PF14992.6 ORF39113 - 6.3 6.3 41.6 0.56 9.7 16.2 3.5 1 1 2 3 3 3 0 TMCO5 family Fib_alpha PF08702.10 ORF39113 - 7 6.8 33.9 4.6 7.4 8.5 4.0 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family EF-hand_1 PF00036.32 ORF112223 - 8.8e-16 56.2 10.7 0.00017 20.9 0.2 6.0 6 0 0 6 6 6 3 EF hand EF-hand_6 PF13405.6 ORF112223 - 1.9e-15 55.4 6.8 0.00015 21.4 0.2 5.9 5 0 0 5 5 5 3 EF-hand domain EF-hand_7 PF13499.6 ORF112223 - 9.2e-15 54.9 8.4 2.8e-05 24.5 1.0 4.2 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF112223 - 1.3e-12 47.4 2.8 0.0017 18.2 0.0 5.2 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF112223 - 1.1e-06 27.9 6.2 0.12 11.9 0.0 5.0 5 0 0 5 5 5 2 EF hand DUF4031 PF13223.6 ORF112223 - 0.038 14.2 0.0 0.17 12.1 0.0 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4031) DUF1351 PF07083.11 ORF112223 - 0.1 12.4 0.2 0.21 11.3 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1351) ABC_tran PF00005.27 ORF102630 - 1.9e-12 47.9 0.0 4.2e-12 46.7 0.0 1.7 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF102630 - 0.12 12.1 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF102630 - 0.12 12.7 0.1 0.46 10.9 0.0 2.0 2 1 0 2 2 2 0 AAA ATPase domain Ion_trans PF00520.31 ORF91654 - 3.2e-29 101.9 29.0 5.4e-20 71.7 12.5 2.1 2 0 0 2 2 2 2 Ion transport protein Ribosomal_L1 PF00687.21 ORF91654 - 0.13 12.0 0.2 0.21 11.3 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L1p/L10e family DUF3242 PF11586.8 ORF64904 - 0.076 12.7 0.0 0.19 11.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3242) Dynein_C PF18199.1 ORF44431 - 7.7e-111 370.2 0.0 9.8e-111 369.8 0.0 1.1 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF44431 - 4.2e-56 189.3 0.0 7.9e-56 188.4 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF44431 - 8.8e-35 119.4 0.0 1.7e-34 118.4 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain EF-hand_7 PF13499.6 ORF23751 - 6.5e-05 23.3 0.5 0.00052 20.4 0.0 2.8 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF23751 - 0.00035 19.9 0.0 0.0014 18.0 0.0 2.1 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 ORF23751 - 0.00048 19.5 0.8 0.0011 18.3 0.0 2.1 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF23751 - 0.0017 18.1 0.0 0.0085 15.9 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain MYT1 PF08474.11 ORF23751 - 0.0031 17.5 2.3 0.0069 16.3 2.3 1.5 1 0 0 1 1 1 1 Myelin transcription factor 1 EF-hand_8 PF13833.6 ORF23751 - 0.013 15.3 0.1 0.07 13.0 0.0 2.3 2 0 0 2 2 2 0 EF-hand domain pair PUA_3 PF17785.1 ORF23751 - 0.053 13.3 0.0 0.18 11.6 0.0 1.9 1 0 0 1 1 1 0 PUA-like domain Cor1 PF04803.12 ORF23751 - 0.53 10.5 9.6 0.61 10.3 4.5 3.3 3 0 0 3 3 3 0 Cor1/Xlr/Xmr conserved region FumaraseC_C PF10415.9 ORF23751 - 2.5 8.6 5.5 2.6 8.5 1.0 3.3 4 0 0 4 4 4 0 Fumarase C C-terminus Enkurin PF13864.6 ORF23751 - 6.8 7.2 18.4 84 3.7 5.1 4.7 2 1 1 3 3 3 0 Calmodulin-binding Aconitase PF00330.20 ORF20137 - 5.4e-71 240.0 0.0 7e-71 239.6 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 ORF20137 - 9.9e-42 142.4 0.0 1.6e-41 141.7 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Pkinase PF00069.25 ORF20075 - 1.4e-63 214.8 0.0 1.8e-63 214.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF20075 - 3.5e-26 92.0 0.1 3.6e-25 88.7 0.1 2.0 1 1 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF20075 - 0.0014 18.3 0.0 0.0028 17.3 0.0 1.5 1 0 0 1 1 1 1 RIO1 family FTA2 PF13095.6 ORF20075 - 0.093 12.3 0.1 0.17 11.5 0.1 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF20075 - 0.22 11.4 0.0 0.37 10.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Ion_trans PF00520.31 ORF92818 - 3.1e-21 75.7 12.7 4.2e-21 75.3 12.7 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF92818 - 6.3e-09 35.7 4.5 6.3e-09 35.7 4.5 2.0 2 1 0 2 2 2 1 Ion channel cNMP_binding PF00027.29 ORF92818 - 0.012 15.6 0.0 0.027 14.5 0.0 1.5 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain GPHH PF16905.5 ORF91648 - 0.023 14.5 0.0 0.087 12.6 0.0 2.0 1 0 0 1 1 1 0 Voltage-dependent L-type calcium channel, IQ-associated Condensation PF00668.20 ORF70866 - 0.0017 17.1 0.0 0.32 9.6 0.0 2.8 3 0 0 3 3 3 2 Condensation domain Kinesin PF00225.23 ORF24355 - 1.6e-101 339.6 0.2 3.1e-101 338.6 0.2 1.4 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF24355 - 9e-21 74.4 0.1 3.5e-20 72.4 0.1 2.1 1 1 0 1 1 1 1 Microtubule binding Kinesin_assoc PF16183.5 ORF24355 - 5.7e-07 29.9 13.6 2.1e-05 24.8 0.1 3.8 1 1 2 3 3 3 2 Kinesin-associated FliT PF05400.13 ORF24355 - 0.45 11.4 4.0 16 6.4 0.3 3.4 3 0 0 3 3 3 0 Flagellar protein FliT Glyco_hydro_20 PF00728.22 ORF22043 - 7.8e-74 249.2 2.3 1e-73 248.8 2.3 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain Glycohydro_20b2 PF14845.6 ORF22043 - 5.8e-07 30.2 0.1 1.3e-05 25.9 0.0 2.6 3 0 0 3 3 3 1 beta-acetyl hexosaminidase like Glyco_hydro_20b PF02838.15 ORF22043 - 1.9e-05 25.4 0.0 4.1e-05 24.3 0.0 1.6 1 1 0 1 1 1 1 Glycosyl hydrolase family 20, domain 2 CPT PF07931.12 ORF19906 - 0.11 12.3 0.1 0.23 11.3 0.1 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein BamHI PF02923.15 ORF19906 - 0.19 11.5 0.0 0.7 9.6 0.0 1.8 2 0 0 2 2 2 0 Restriction endonuclease BamHI PIP5K PF01504.18 ORF19601 - 3.8e-65 219.8 6.5 3.8e-65 219.8 6.5 2.0 2 1 0 2 2 2 1 Phosphatidylinositol-4-phosphate 5-Kinase DUF4482 PF14818.6 ORF19601 - 0.13 13.2 4.0 0.35 11.7 4.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4482) DUF5327 PF17261.2 ORF19601 - 0.19 12.5 4.0 0.43 11.3 4.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5327) N_BRCA1_IG PF16158.5 ORF89324 - 1.1e-08 35.7 0.0 5e-08 33.6 0.0 2.1 2 0 0 2 2 2 1 Ig-like domain from next to BRCA1 gene PB1 PF00564.24 ORF89324 - 0.00044 20.1 0.2 0.0012 18.8 0.2 1.8 1 0 0 1 1 1 1 PB1 domain DUF4200 PF13863.6 ORF74874 - 2.8e-28 98.7 11.1 2.8e-28 98.7 11.1 5.2 4 1 1 5 5 5 1 Domain of unknown function (DUF4200) DUF2325 PF10087.9 ORF74874 - 0.13 12.3 3.4 0.13 12.4 0.5 2.6 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2325) Ion_trans PF00520.31 ORF62809 - 5.5e-21 74.9 15.7 8.4e-21 74.3 15.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF62809 - 0.0037 17.1 0.1 0.094 12.7 0.0 3.0 3 0 0 3 3 3 1 EF-hand domain p25-alpha PF05517.12 ORF62809 - 0.071 13.3 0.4 0.16 12.1 0.0 1.7 2 0 0 2 2 2 0 p25-alpha EF-hand_7 PF13499.6 ORF62809 - 0.073 13.5 0.0 0.68 10.4 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF62809 - 0.085 12.4 0.1 2.5 7.9 0.0 3.1 3 0 0 3 3 3 0 EF hand PKD_channel PF08016.12 ORF62809 - 7.4 5.1 21.9 6.9e+02 -1.4 22.2 2.7 1 1 0 1 1 1 0 Polycystin cation channel ubiquitin PF00240.23 ORF55294 - 7.9e-29 99.2 0.3 7.9e-29 99.2 0.3 1.9 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF55294 - 1.9e-14 53.3 0.4 5.4e-14 51.8 0.4 1.9 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF55294 - 0.0025 18.2 0.1 0.011 16.2 0.1 2.2 1 0 0 1 1 1 1 Ubiquitin-like domain DUF4139 PF13598.6 ORF55294 - 0.0088 15.8 0.0 0.022 14.5 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4139) TBK1_ULD PF18396.1 ORF55294 - 0.039 13.9 0.1 0.12 12.3 0.1 1.8 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain G10 PF01125.17 ORF55294 - 3 7.6 5.1 9.8 5.9 5.1 1.9 1 1 0 1 1 1 0 G10 protein DUF948 PF06103.11 ORF55294 - 3.1 8.1 7.6 48 4.3 0.1 3.4 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 ORF55294 - 8.4 5.6 15.2 16 4.7 15.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Thioredoxin PF00085.20 ORF36104 - 3.4e-07 30.2 1.8 0.0004 20.3 0.2 2.5 2 0 0 2 2 2 2 Thioredoxin OST3_OST6 PF04756.13 ORF36104 - 0.00016 21.1 2.9 0.0071 15.7 0.1 2.3 2 0 0 2 2 2 2 OST3 / OST6 family, transporter family DUF772 PF05598.11 ORF36104 - 0.021 14.8 0.0 0.062 13.3 0.0 1.9 1 0 0 1 1 1 0 Transposase domain (DUF772) Thioredoxin_7 PF13899.6 ORF36104 - 0.041 14.1 0.1 0.86 9.8 0.0 2.6 2 0 0 2 2 2 0 Thioredoxin-like Toxin-deaminase PF14424.6 ORF36104 - 0.062 13.4 1.0 2.2 8.4 0.0 2.7 2 0 0 2 2 2 0 The BURPS668_1122 family of deaminases DUF1722 PF08349.11 ORF36104 - 0.1 12.9 1.7 11 6.4 0.0 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF1722) Thioredoxin_2 PF13098.6 ORF36104 - 0.11 13.0 1.2 2 8.9 0.1 2.8 2 1 0 2 2 2 0 Thioredoxin-like domain DUF836 PF05768.14 ORF36104 - 0.93 9.9 3.9 14 6.1 0.2 3.1 3 0 0 3 3 3 0 Glutaredoxin-like domain (DUF836) Casc1_N PF15927.5 ORF22649 - 1.7e-15 57.3 1.4 2.7e-15 56.6 1.4 1.3 1 0 0 1 1 1 1 Cancer susceptibility candidate 1 N-terminus Asp PF00026.23 ORF13095 - 9.2e-50 169.8 0.0 2.4e-49 168.5 0.0 1.7 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF13095 - 2.7e-12 47.3 1.0 1.2e-11 45.2 0.4 2.1 2 0 0 2 2 2 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF13095 - 0.0087 15.9 0.0 0.088 12.6 0.0 2.3 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF13095 - 0.012 16.3 0.0 5.4 7.7 0.0 3.0 3 0 0 3 3 3 0 Aspartyl protease IL17 PF06083.11 ORF13095 - 0.17 12.4 0.1 0.57 10.7 0.0 1.8 2 0 0 2 2 2 0 Interleukin-17 Asp PF00026.23 ORF108832 - 9.2e-50 169.8 0.0 2.4e-49 168.5 0.0 1.7 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF108832 - 2.7e-12 47.3 1.0 1.2e-11 45.2 0.4 2.1 2 0 0 2 2 2 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF108832 - 0.0087 15.9 0.0 0.088 12.6 0.0 2.3 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF108832 - 0.012 16.3 0.0 5.4 7.7 0.0 3.0 3 0 0 3 3 3 0 Aspartyl protease IL17 PF06083.11 ORF108832 - 0.17 12.4 0.1 0.57 10.7 0.0 1.8 2 0 0 2 2 2 0 Interleukin-17 ubiquitin PF00240.23 ORF108646 - 7.9e-29 99.2 0.3 7.9e-29 99.2 0.3 1.9 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF108646 - 1.9e-14 53.3 0.4 5.4e-14 51.8 0.4 1.9 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF108646 - 0.0025 18.2 0.1 0.011 16.2 0.1 2.2 1 0 0 1 1 1 1 Ubiquitin-like domain DUF4139 PF13598.6 ORF108646 - 0.0088 15.8 0.0 0.022 14.5 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4139) TBK1_ULD PF18396.1 ORF108646 - 0.039 13.9 0.1 0.12 12.3 0.1 1.8 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain G10 PF01125.17 ORF108646 - 3 7.6 5.1 9.8 5.9 5.1 1.9 1 1 0 1 1 1 0 G10 protein DUF948 PF06103.11 ORF108646 - 3.1 8.1 7.6 48 4.3 0.1 3.4 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 ORF108646 - 8.4 5.6 15.2 16 4.7 15.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ERGIC_N PF13850.6 NODE_5289_length_1702_cov_78.924415_g3808_i0reverse_frame_2 - 0.061 13.7 0.2 0.19 12.1 0.2 1.8 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) MukB_hinge PF16330.5 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 1.8e-75 252.3 4.6 1.2e-74 249.5 0.1 3.3 1 1 1 2 2 2 1 MukB hinge domain DUF2205 PF10224.9 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 0.013 15.4 15.2 0.022 14.7 1.5 4.4 3 2 0 3 3 3 0 Short coiled-coil protein Seryl_tRNA_N PF02403.22 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 0.042 14.1 0.7 0.042 14.1 0.7 6.1 3 2 2 8 8 8 0 Seryl-tRNA synthetase N-terminal domain sCache_3_2 PF17203.4 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 0.77 9.9 6.2 0.67 10.1 1.3 3.0 2 0 0 2 2 2 0 Single cache domain 3 IF-2B PF01008.17 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 1.1 8.4 6.0 0.18 11.0 1.1 2.1 2 1 0 2 2 2 0 Initiation factor 2 subunit family Baculo_PEP_C PF04513.12 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 1.4 9.0 12.5 2.9 7.9 1.2 3.5 2 1 2 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus Fib_alpha PF08702.10 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 4.4 7.5 22.9 0.055 13.6 3.7 4.4 4 1 1 5 5 5 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 5.4 7.1 13.6 16 5.6 3.9 4.6 2 2 2 4 4 4 0 Protein of unknown function (DUF1664) DASH_Dam1 PF08653.10 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 5.6 6.8 6.8 62 3.5 0.2 4.9 5 1 1 6 6 6 0 DASH complex subunit Dam1 DUF465 PF04325.13 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 6.2 6.9 10.2 1.5 8.9 1.1 4.1 4 1 1 5 5 5 0 Protein of unknown function (DUF465) BLOC1_2 PF10046.9 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 7.2 7.0 25.1 0.31 11.4 1.0 6.3 4 2 4 8 8 8 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 YtzH PF14165.6 NODE_5276_length_1703_cov_3.284772_g3799_i0reverse_frame_2 - 9.5 6.7 11.4 1.1 9.7 1.5 3.7 2 1 1 3 3 3 0 YtzH-like protein TMEM239 PF15841.5 NODE_5276_length_1703_cov_3.284772_g3799_i0forward_frame_2 - 0.071 13.0 1.9 0.17 11.7 1.9 1.6 1 0 0 1 1 1 0 Transmembrane protein 239 family FtsJ PF01728.19 ORF98947 - 2.1e-09 37.7 0.0 4.4e-09 36.7 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase Vsr PF03852.15 ORF98947 - 0.0047 16.7 0.2 2.2 8.2 0.0 3.6 4 0 0 4 4 4 2 DNA mismatch endonuclease Vsr Methyltransf_25 PF13649.6 ORF98947 - 0.022 15.5 0.0 0.093 13.4 0.0 2.2 2 0 0 2 2 2 0 Methyltransferase domain Ank PF00023.30 ORF92805 - 4.2e-11 42.8 2.7 0.022 15.2 0.1 5.5 6 0 0 6 6 6 3 Ankyrin repeat Ank_2 PF12796.7 ORF92805 - 1.4e-10 41.6 0.0 0.0052 17.3 0.0 3.9 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF92805 - 4.5e-09 36.7 0.0 0.0014 19.2 0.0 4.8 5 2 0 5 5 5 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF92805 - 1.6e-08 34.2 0.0 0.8 10.5 0.0 5.6 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF91373 - 2.4e-10 40.4 2.2 0.022 15.2 0.1 5.2 5 0 0 5 5 5 3 Ankyrin repeat Ank_2 PF12796.7 ORF91373 - 3.8e-10 40.2 0.0 0.01 16.4 0.0 3.9 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF91373 - 4.1e-10 40.0 0.0 0.0014 19.2 0.0 4.9 4 1 2 6 6 6 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF91373 - 8.4e-10 38.1 0.1 0.17 12.5 0.0 5.0 5 0 0 5 5 5 3 Ankyrin repeat KAP PF05804.12 ORF58695 - 4.1e-88 296.3 5.9 5e-88 296.0 5.9 1.0 1 0 0 1 1 1 1 Kinesin-associated protein (KAP) Arm PF00514.23 ORF58695 - 4.1e-07 29.8 10.6 0.03 14.4 0.0 6.7 7 0 0 7 7 7 2 Armadillo/beta-catenin-like repeat Arm_2 PF04826.13 ORF58695 - 0.00025 20.6 11.0 0.03 13.8 0.9 3.7 1 1 2 3 3 3 3 Armadillo-like V-ATPase_H_N PF03224.14 ORF58695 - 0.025 13.9 10.6 0.028 13.7 0.5 3.5 1 1 1 3 3 3 0 V-ATPase subunit H LRR_6 PF13516.6 ORF45712 - 1.3e-07 31.1 4.9 0.036 14.1 0.1 4.4 4 0 0 4 4 4 2 Leucine Rich repeat LRR_1 PF00560.33 ORF45712 - 7.8e-05 22.7 2.0 2.9 8.8 0.0 4.1 3 1 0 3 3 3 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF45712 - 0.005 17.2 3.5 0.2 12.1 1.4 3.0 2 1 1 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF45712 - 0.31 10.8 6.6 0.38 10.6 1.8 3.0 2 1 0 2 2 2 0 Leucine rich repeat Hydrolase PF00702.26 ORF37927 - 2e-11 44.6 0.7 4.8e-11 43.3 0.5 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF37927 - 0.00013 21.8 0.3 0.00013 21.8 0.3 2.4 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase Rubredoxin_2 PF18073.1 ORF37927 - 0.18 11.6 0.4 0.34 10.7 0.4 1.4 1 0 0 1 1 1 0 Rubredoxin metal binding domain Arteri_Gl PF00951.18 ORF37927 - 0.49 10.2 3.4 1.5 8.6 2.4 2.3 3 0 0 3 3 3 0 Arterivirus GL envelope glycoprotein AMP-binding PF00501.28 ORF32859 - 2.9e-65 220.5 0.0 3.6e-65 220.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Clr5 PF14420.6 ORF32859 - 0.096 12.9 0.3 0.32 11.3 0.3 1.9 1 0 0 1 1 1 0 Clr5 domain GBP PF02263.19 ORF27007 - 1.6e-34 119.4 0.0 3.1e-34 118.4 0.0 1.5 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain Ank PF00023.30 ORF24081 - 2.4e-10 40.4 2.2 0.022 15.2 0.1 5.2 5 0 0 5 5 5 3 Ankyrin repeat Ank_2 PF12796.7 ORF24081 - 3.8e-10 40.2 0.0 0.01 16.4 0.0 3.9 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF24081 - 4.1e-10 40.0 0.0 0.0014 19.2 0.0 4.9 4 1 2 6 6 6 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF24081 - 8.4e-10 38.1 0.1 0.17 12.5 0.0 5.0 5 0 0 5 5 5 3 Ankyrin repeat DEC-1_N PF04625.13 ORF112100 - 0.67 8.9 5.1 1.3 8.0 5.1 1.4 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DUF647 PF04884.14 ORF109321 - 2e-61 207.7 2.9 2.7e-61 207.2 2.9 1.2 1 0 0 1 1 1 1 Vitamin B6 photo-protection and homoeostasis Tudor-knot PF11717.8 ORF109321 - 0.27 11.1 1.8 0.41 10.6 0.0 2.3 3 0 0 3 3 3 0 RNA binding activity-knot of a chromodomain DBD_HTH PF18430.1 NODE_5299_length_1700_cov_3028.542342_g3406_i1reverse_frame_2 - 0.2 11.5 0.3 2.6 7.9 0.1 2.5 2 0 0 2 2 2 0 Putative DNA-binding domain Thioesterase PF00975.20 ORF71127 - 3.2e-13 50.3 0.1 8.2e-13 49.0 0.1 1.7 1 0 0 1 1 1 1 Thioesterase domain KAsynt_C_assoc PF16197.5 ORF71127 - 4.7e-08 33.5 0.0 3.2e-05 24.3 0.0 2.6 2 0 0 2 2 2 2 Ketoacyl-synthetase C-terminal extension Abhydrolase_6 PF12697.7 ORF71127 - 0.025 15.2 0.1 0.074 13.6 0.0 1.8 2 0 0 2 2 2 0 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF71127 - 0.034 13.4 0.1 0.079 12.2 0.1 1.6 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF71127 - 0.073 12.7 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF4116 PF13475.6 ORF58224 - 1.6e-109 357.5 0.0 6.2e-12 45.1 0.0 12.5 8 4 5 13 13 13 13 Domain of unknown function (DUF4116) MotCF PF09158.10 ORF58224 - 0.003 17.6 0.0 0.44 10.6 0.0 3.4 2 1 0 2 2 2 1 Bacteriophage T4 MotA, C-terminal AfsA PF03756.13 ORF58224 - 0.016 15.2 1.3 0.87 9.6 0.1 3.9 3 1 0 3 3 3 0 A-factor biosynthesis hotdog domain XPC-binding PF09280.11 ORF58224 - 0.12 12.1 0.0 0.63 9.8 0.0 2.3 2 0 0 2 2 2 0 XPC-binding domain Jag_N PF14804.6 ORF58224 - 0.35 11.3 1.9 0.54 10.6 0.7 2.0 2 0 0 2 2 2 0 Jag N-terminus AFG1_ATPase PF03969.16 ORF57099 - 3.3e-91 305.9 0.1 6.2e-91 305.0 0.1 1.4 1 1 0 1 1 1 1 AFG1-like ATPase EF-hand_7 PF13499.6 ORF57099 - 3.5e-08 33.8 2.7 3.5e-08 33.8 2.7 2.1 2 0 0 2 2 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF57099 - 1.8e-07 30.2 1.0 0.0026 17.2 0.2 2.9 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF57099 - 9.3e-07 28.3 0.1 0.0025 17.6 0.1 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF57099 - 8.5e-06 25.5 0.3 0.016 15.1 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair Bac_DnaA PF00308.18 ORF57099 - 0.0012 18.8 1.5 0.046 13.5 0.1 3.3 3 1 0 3 3 3 1 Bacterial dnaA protein DUF2076 PF09849.9 ORF57099 - 0.0015 18.7 0.0 0.0027 17.8 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) AAA_22 PF13401.6 ORF57099 - 0.0032 17.8 0.1 0.098 12.9 0.0 2.6 2 0 0 2 2 2 1 AAA domain EF-hand_5 PF13202.6 ORF57099 - 0.0034 16.8 0.1 0.18 11.3 0.0 2.5 2 0 0 2 2 2 1 EF hand AAA_5 PF07728.14 ORF57099 - 0.0044 17.0 0.2 0.014 15.4 0.0 2.0 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) ResIII PF04851.15 ORF57099 - 0.0079 16.2 0.0 0.017 15.1 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_16 PF13191.6 ORF57099 - 0.05 14.0 0.1 1.1 9.6 0.0 2.5 2 1 0 2 2 2 0 AAA ATPase domain T2SSE PF00437.20 ORF57099 - 0.064 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 ORF57099 - 0.068 13.6 0.1 0.22 12.0 0.1 1.9 1 0 0 1 1 1 0 RNA helicase TrwB_AAD_bind PF10412.9 ORF57099 - 0.072 12.0 0.0 0.13 11.2 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain EnY2 PF10163.9 ORF57099 - 0.079 13.3 0.3 3.3 8.1 0.1 2.4 2 0 0 2 2 2 0 Transcription factor e(y)2 PIF1 PF05970.14 ORF57099 - 0.16 11.1 0.2 0.44 9.7 0.1 1.7 2 0 0 2 2 2 0 PIF1-like helicase AAA_19 PF13245.6 ORF57099 - 0.24 11.7 0.8 7.4 6.9 0.8 2.5 1 1 0 1 1 1 0 AAA domain EF-hand_4 PF12763.7 ORF57099 - 1.3 9.0 3.3 11 6.0 0.2 3.0 2 1 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand ABC_tran PF00005.27 ORF51933 - 1.1e-08 35.7 0.0 4.8e-08 33.6 0.0 2.1 1 1 0 1 1 1 1 ABC transporter AAA_25 PF13481.6 ORF51933 - 0.023 14.3 0.9 0.084 12.4 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF51933 - 0.036 14.4 0.3 0.18 12.2 0.0 2.4 2 1 0 2 2 2 0 AAA ATPase domain SMC_N PF02463.19 ORF51933 - 0.047 13.1 0.0 2.4 7.6 0.0 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Iso_dh PF00180.20 ORF51933 - 0.065 12.4 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Isocitrate/isopropylmalate dehydrogenase AAA_29 PF13555.6 ORF51933 - 0.086 12.6 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF51933 - 0.1 12.9 0.0 1.3 9.3 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 ORF51933 - 0.37 11.0 2.5 0.54 10.5 0.1 2.4 3 0 0 3 3 3 0 AAA domain PP2C PF00481.21 ORF51760 - 5.1e-37 127.9 0.0 9.1e-37 127.1 0.0 1.4 1 0 0 1 1 1 1 Protein phosphatase 2C Phage_TAC_8 PF10666.9 ORF51760 - 0.029 14.6 0.0 0.059 13.7 0.0 1.4 1 0 0 1 1 1 0 Phage tail assembly chaperone protein Gp14 ()A118 SgrR_N PF12793.7 ORF21726 - 5.8e-38 129.7 2.0 1e-37 128.9 2.0 1.4 1 0 0 1 1 1 1 Sugar transport-related sRNA regulator N-term SBP_bac_5 PF00496.22 ORF21726 - 8.4e-16 57.9 0.0 1.5e-15 57.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle HTH_28 PF13518.6 ORF21726 - 0.017 15.2 0.4 0.038 14.1 0.4 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 ORF21726 - 0.074 13.0 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.20 ORF21726 - 0.099 13.0 0.0 0.26 11.6 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator tRNA-synt_1c PF00749.21 ORF99572 - 1.6e-62 211.2 0.0 2.3e-62 210.7 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 ORF99572 - 7.9e-32 110.5 0.0 1.3e-31 109.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1c PF00749.21 ORF98540 - 1.6e-62 211.2 0.0 2.3e-62 210.7 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 ORF98540 - 7.9e-32 110.5 0.0 1.3e-31 109.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain APC_N_CC PF16689.5 ORF85600 - 0.0017 18.4 3.5 0.0017 18.4 3.5 3.7 3 0 0 3 3 3 1 Coiled-coil N-terminus of APC, dimerisation domain DUF1664 PF07889.12 ORF85600 - 0.011 15.7 1.6 0.011 15.7 1.6 5.9 3 3 4 7 7 7 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 ORF85600 - 0.037 14.1 6.4 0.1 12.6 1.3 3.4 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus APG17 PF04108.12 ORF85600 - 1.7 7.7 38.7 0.084 12.0 7.0 4.2 2 1 0 3 3 3 0 Autophagy protein Apg17 PI_PP_I PF18363.1 ORF85600 - 5.8 7.2 9.6 0.86 9.8 0.7 3.7 2 1 1 3 3 3 0 Phosphoinositide phosphatase insertion domain DUF5340 PF17275.2 ORF85600 - 7.2 6.8 7.3 1.3 9.2 1.5 2.8 2 1 1 3 3 3 0 Family of unknown function (DUF5340) Cpn60_TCP1 PF00118.24 ORF81276 - 8.7e-156 519.4 2.1 1e-155 519.2 2.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Beta_helix_2 PF18835.1 ORF81276 - 0.064 13.0 0.0 11 5.9 0.1 2.8 2 0 0 2 2 2 0 Beta helix repeat of Inulin fructotransferase PARP PF00644.20 ORF77337 - 1.4e-13 50.9 0.1 2.4e-13 50.1 0.1 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain ARTD15_N PF18084.1 ORF77337 - 7.7e-05 22.9 0.0 0.0011 19.2 0.0 2.4 1 1 0 1 1 1 1 ARTD15 N-terminal domain PTS_2-RNA PF01885.16 ORF77337 - 0.15 12.1 0.0 0.33 11.0 0.0 1.5 1 1 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Cpn60_TCP1 PF00118.24 ORF75719 - 8.7e-156 519.4 2.1 1e-155 519.2 2.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Beta_helix_2 PF18835.1 ORF75719 - 0.064 13.0 0.0 11 5.9 0.1 2.8 2 0 0 2 2 2 0 Beta helix repeat of Inulin fructotransferase Mitoc_L55 PF09776.9 ORF75719 - 0.19 11.4 0.1 0.45 10.3 0.1 1.5 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L55 GTP_EFTU PF00009.27 ORF74104 - 4.4e-40 137.3 0.0 7.8e-40 136.5 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 ORF74104 - 2e-22 79.0 0.0 4.4e-22 77.9 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF74104 - 4.7e-10 39.7 4.3 8.2e-10 38.9 3.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF74104 - 4.3e-05 23.5 0.3 0.00012 22.1 0.1 1.8 2 0 0 2 2 2 1 Elongation Factor G, domain II MMR_HSR1 PF01926.23 ORF74104 - 0.00013 22.0 0.1 0.0011 19.0 0.0 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF74104 - 0.014 15.0 0.0 0.21 11.1 0.0 2.6 2 1 0 2 2 2 0 Ferrous iron transport protein B DUF4190 PF13828.6 ORF74104 - 0.33 10.7 2.6 0.26 11.1 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4190) TPR_1 PF00515.28 ORF73674 - 1.8e-56 185.8 33.9 4e-09 35.9 0.0 9.8 9 1 1 10 10 10 9 Tetratricopeptide repeat TPR_2 PF07719.17 ORF73674 - 3.6e-48 157.8 30.3 1e-06 28.4 0.0 10.3 10 0 0 10 10 10 9 Tetratricopeptide repeat TPR_11 PF13414.6 ORF73674 - 3.4e-32 109.8 22.8 3.1e-08 33.2 0.1 7.9 6 3 3 9 9 9 6 TPR repeat TPR_8 PF13181.6 ORF73674 - 1.2e-29 100.0 35.2 3.1e-05 23.8 0.5 10.2 10 0 0 10 10 10 7 Tetratricopeptide repeat STI1 PF17830.1 ORF73674 - 2.2e-26 91.5 18.8 2e-16 59.7 5.0 3.2 3 0 0 3 3 2 2 STI1 domain TPR_14 PF13428.6 ORF73674 - 1.1e-22 78.8 2.7 0.21 12.5 0.2 8.8 5 3 4 9 9 9 6 Tetratricopeptide repeat TPR_19 PF14559.6 ORF73674 - 8.9e-21 74.2 8.9 0.0023 18.4 0.2 6.6 3 3 3 6 6 6 6 Tetratricopeptide repeat TPR_16 PF13432.6 ORF73674 - 2.8e-19 69.5 0.1 0.0035 18.0 0.0 6.7 6 1 0 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF73674 - 4.3e-19 68.6 13.7 4.6e-08 33.2 0.7 7.1 4 2 2 6 6 6 4 Tetratricopeptide repeat TPR_17 PF13431.6 ORF73674 - 3e-18 64.8 11.4 0.00068 19.8 0.0 9.4 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF73674 - 2.6e-12 45.8 7.6 0.0056 16.6 0.2 8.2 8 0 0 8 8 8 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF73674 - 2.9e-12 46.6 0.0 0.2 11.8 0.0 6.3 4 1 2 7 7 7 4 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF73674 - 7.2e-09 35.6 14.1 0.087 12.9 0.0 7.4 7 1 0 7 7 6 3 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.6 ORF73674 - 2e-07 31.2 12.5 9.9 7.1 0.3 7.9 8 0 0 8 8 8 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF73674 - 2.8e-07 30.2 10.2 0.98 9.4 0.0 7.1 8 0 0 8 8 7 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF73674 - 6e-05 23.2 19.1 0.037 14.3 2.2 5.5 5 1 1 6 6 5 3 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 ORF73674 - 0.0043 16.0 45.6 0.26 10.2 0.1 5.4 2 2 3 5 5 5 3 NMDA receptor-regulated protein 1 TPR_3 PF07720.12 ORF73674 - 0.12 12.4 10.2 8.2 6.5 0.1 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat CLN3 PF02487.17 ORF73674 - 2.6 7.0 4.6 4.6 6.2 4.6 1.3 1 0 0 1 1 1 0 CLN3 protein Cytomega_UL84 PF06284.11 ORF73674 - 5.1 5.4 6.7 7.4 4.9 6.7 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein fn3 PF00041.21 ORF42758 - 2.5e-09 37.4 0.0 5.1e-09 36.4 0.0 1.5 1 0 0 1 1 1 1 Fibronectin type III domain PAN_2 PF08276.11 ORF42758 - 0.0038 17.3 0.2 0.0095 16.0 0.2 1.6 1 0 0 1 1 1 1 PAN-like domain PAN_1 PF00024.26 ORF42758 - 0.013 15.4 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 PAN domain PAN_3 PF08277.12 ORF42758 - 0.013 15.2 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 PAN-like domain PAN_4 PF14295.6 ORF42758 - 1.7 8.6 5.8 0.38 10.7 1.5 2.1 2 0 0 2 2 2 0 PAN domain Cpn60_TCP1 PF00118.24 ORF30439 - 8.7e-156 519.4 2.1 1e-155 519.2 2.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Beta_helix_2 PF18835.1 ORF30439 - 0.064 13.0 0.0 11 5.9 0.1 2.8 2 0 0 2 2 2 0 Beta helix repeat of Inulin fructotransferase Mitoc_L55 PF09776.9 ORF30439 - 0.19 11.4 0.1 0.45 10.3 0.1 1.5 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L55 DUF4476 PF14771.6 ORF1826 - 0.15 12.4 0.2 3.1 8.1 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4476) Occludin_ELL PF07303.13 ORF105243 - 0.0028 18.3 46.4 0.0089 16.7 4.1 6.6 1 1 6 7 7 7 2 Occludin homology domain Baculo_PEP_C PF04513.12 ORF105243 - 0.0031 17.6 25.2 0.034 14.2 5.4 5.4 2 2 1 5 5 5 1 Baculovirus polyhedron envelope protein, PEP, C terminus HALZ PF02183.18 ORF105243 - 0.0071 16.5 1.5 0.0071 16.5 1.5 4.4 4 0 0 4 4 4 1 Homeobox associated leucine zipper DUF5131 PF07505.11 ORF105243 - 0.034 13.6 1.3 0.063 12.7 1.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF5131) Seryl_tRNA_N PF02403.22 ORF105243 - 0.056 13.7 0.5 0.056 13.7 0.5 6.6 2 1 4 7 7 7 0 Seryl-tRNA synthetase N-terminal domain ApoO PF09769.9 ORF105243 - 0.74 9.8 7.6 1.2 9.1 0.4 3.7 3 1 0 3 3 3 0 Apolipoprotein O DUF4407 PF14362.6 ORF105243 - 1.2 8.5 35.8 0.92 8.8 11.0 4.0 1 1 3 4 4 4 0 Domain of unknown function (DUF4407) Cytochrom_C_2 PF01322.20 ORF105243 - 1.3 9.9 5.9 7.9 7.4 0.1 3.6 2 1 0 2 2 2 0 Cytochrome C' KxDL PF10241.9 ORF105243 - 2.5 8.5 33.7 0.032 14.5 4.8 5.5 4 3 2 6 6 6 0 Uncharacterized conserved protein MtrB PF05440.12 ORF105243 - 2.6 8.5 5.5 11 6.5 0.2 3.9 3 1 0 4 4 4 0 Tetrahydromethanopterin S-methyltransferase subunit B Fib_alpha PF08702.10 ORF105243 - 5.7 7.1 57.3 0.37 11.0 9.2 5.9 2 1 5 7 7 7 0 Fibrinogen alpha/beta chain family Fez1 PF06818.15 ORF105243 - 9.2 6.7 53.2 2.4 8.6 10.1 4.1 1 1 3 4 4 4 0 Fez1 mTERF PF02536.14 ORF8386 - 9.4e-57 192.3 0.0 3.1e-36 124.9 0.1 2.6 1 1 1 2 2 2 2 mTERF Sigma70_r3 PF04539.16 ORF8386 - 0.0015 18.6 0.7 1.2 9.3 0.0 3.9 4 0 0 4 4 4 1 Sigma-70 region 3 SurA_N_3 PF13624.6 ORF8386 - 0.0029 17.4 0.0 0.0077 16.0 0.0 1.7 1 0 0 1 1 1 1 SurA N-terminal domain TetR_C_1 PF02909.17 ORF8386 - 0.012 15.5 0.0 7.9 6.3 0.0 4.0 4 1 0 5 5 5 0 Tetracyclin repressor-like, C-terminal domain OHCU_decarbox PF09349.10 ORF8386 - 0.017 15.6 0.0 16 6.0 0.0 3.3 3 0 0 3 3 3 0 OHCU decarboxylase DUF937 PF06078.11 ORF8386 - 0.095 13.3 0.1 0.68 10.5 0.1 2.3 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF937) TAL_effector PF03377.13 ORF8386 - 0.11 12.8 0.7 17 5.8 0.0 4.3 6 0 0 6 6 6 0 TAL effector repeat Dzip-like_N PF13815.6 ORF67139 - 1e-21 77.1 7.2 1e-21 77.1 7.2 6.7 4 2 1 5 5 5 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal zf-C2H2_jaz PF12171.8 ORF67139 - 5e-05 23.5 0.3 5e-05 23.5 0.3 2.2 3 0 0 3 3 3 1 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 ORF67139 - 0.00019 21.7 0.1 0.00044 20.5 0.1 1.7 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-met PF12874.7 ORF67139 - 0.00064 20.0 0.4 0.0017 18.7 0.1 2.0 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 ORF67139 - 0.0068 17.2 0.0 0.017 15.9 0.0 1.8 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF67139 - 0.017 15.8 0.7 0.017 15.8 0.7 4.4 2 2 1 5 5 5 0 Zinc finger C2H2-type, 3 repeats zf-Di19 PF05605.12 ORF67139 - 0.054 13.8 0.7 0.22 11.9 0.1 2.3 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_9 PF16293.5 ORF67139 - 0.19 11.6 0.1 0.19 11.6 0.1 3.4 3 0 0 3 3 3 0 C2H2 type zinc-finger (1 copy) GP17 PF17420.2 ORF35872 - 0.038 14.1 1.1 0.11 12.6 1.1 1.8 1 0 0 1 1 1 0 Superinfection exclusion gene product 17 R3H-assoc PF13902.6 ORF25885 - 0.43 11.0 3.1 14 6.0 1.0 3.1 2 1 0 2 2 2 0 R3H-associated N-terminal domain Pyridoxal_deC PF00282.19 ORF106524 - 4.9e-18 65.0 0.0 9.7e-18 64.0 0.0 1.4 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 ORF106524 - 6e-09 35.3 0.0 2.4e-08 33.3 0.0 1.8 1 1 0 1 1 1 1 Aminotransferase class-V HGTP_anticodon PF03129.20 ORF101624 - 3.5e-22 78.4 0.0 8.4e-22 77.1 0.0 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 ORF101624 - 1.1e-09 38.5 0.0 2.9e-09 37.1 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Fibrillin_U_N PF18193.1 ORF83395 - 0.026 14.6 0.0 0.073 13.2 0.0 1.7 1 0 0 1 1 1 0 Fibrillin 1 unique N-terminal domain ALF PF03752.13 ORF83395 - 4.7 7.3 9.2 40 4.3 0.0 4.6 4 0 0 4 4 4 0 Short repeats of unknown function TPR_12 PF13424.6 ORF54131 - 0.016 15.5 0.6 0.28 11.5 0.5 2.4 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF52673 - 0.016 15.5 0.6 0.28 11.5 0.5 2.4 1 1 1 2 2 2 0 Tetratricopeptide repeat TTL PF03133.15 ORF3849 - 2.6e-42 145.0 5.7 5.7e-42 143.8 5.7 1.5 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF3849 - 0.00043 19.6 0.5 0.0069 15.7 0.1 2.2 2 0 0 2 2 2 1 YheC/D like ATP-grasp Ins_allergen_rp PF06757.13 ORF3849 - 0.035 14.1 0.3 0.23 11.4 0.1 2.2 2 0 0 2 2 2 0 Insect allergen related repeat, nitrile-specifier detoxification ATPgrasp_ST PF14397.6 ORF3849 - 0.039 13.2 0.0 0.17 11.1 0.0 2.0 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks10.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks10.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks10.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks10.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:48:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4516 PF14990.6 NODE_37554_length_567_cov_1.996241_g30298_i0forward_frame_2 - 0.17 11.6 0.9 0.32 10.8 0.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) MFS_1 PF07690.16 NODE_37553_length_567_cov_2.605263_g30297_i0forward_frame_2 - 6.7e-17 61.4 5.5 7.8e-17 61.2 5.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 NODE_37553_length_567_cov_2.605263_g30297_i0forward_frame_2 - 0.086 11.4 15.1 0.043 12.4 11.0 1.9 1 1 1 2 2 2 0 MFS/sugar transport protein AKAP28 PF14469.6 NODE_37552_length_567_cov_2.667293_g30296_i0reverse_frame_3 - 0.092 12.5 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 28 kDa A-kinase anchor FAD_binding_4 PF01565.23 NODE_37550_length_567_cov_3.186090_g30294_i0reverse_frame_2 - 5e-09 36.0 0.1 6.7e-09 35.6 0.1 1.1 1 0 0 1 1 1 1 FAD binding domain DNA_photolyase PF00875.18 NODE_37534_length_567_cov_86.708647_g30278_i0reverse_frame_3 - 0.094 12.7 0.2 0.11 12.5 0.2 1.1 1 0 0 1 1 1 0 DNA photolyase Bul1_C PF04426.12 NODE_37534_length_567_cov_86.708647_g30278_i0forward_frame_3 - 0.017 14.5 0.2 0.019 14.4 0.2 1.2 1 0 0 1 1 1 0 Bul1 C terminus Ank_3 PF13606.6 NODE_37530_length_567_cov_100.934211_g30274_i0forward_frame_3 - 0.0058 17.0 0.0 0.016 15.6 0.0 1.8 1 0 0 1 1 1 1 Ankyrin repeat Ank_4 PF13637.6 NODE_37530_length_567_cov_100.934211_g30274_i0forward_frame_3 - 0.02 15.4 0.0 0.08 13.6 0.0 1.9 1 1 0 2 2 2 0 Ankyrin repeats (many copies) Ank PF00023.30 NODE_37530_length_567_cov_100.934211_g30274_i0forward_frame_3 - 0.12 12.9 0.0 0.24 11.9 0.0 1.5 1 0 0 1 1 1 0 Ankyrin repeat Methyltransf_23 PF13489.6 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 2.2e-11 43.9 0.0 2.8e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 1.1e-10 42.1 0.0 1.8e-10 41.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 5e-10 39.4 0.0 4.5e-09 36.3 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 4.7e-09 36.9 0.0 1.4e-08 35.4 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 1.2e-07 32.3 0.0 2.2e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 0.0055 16.1 0.0 0.027 13.9 0.0 1.8 1 1 1 2 2 2 1 Tellurite resistance protein TehB MTS PF05175.14 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 0.019 14.5 0.0 0.028 14.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_32 PF13679.6 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 0.021 14.8 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 0.17 11.2 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase RIBIOP_C PF04950.12 ORF99089 - 0.18 11.2 6.9 0.26 10.7 6.9 1.2 1 0 0 1 1 1 0 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal FAM176 PF14851.6 ORF99089 - 1.1 8.9 10.5 0.67 9.6 3.8 2.1 2 0 0 2 2 2 0 FAM176 family SAPS PF04499.15 ORF99089 - 3.4 6.3 5.9 4.8 5.9 5.9 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein FancD2 PF14631.6 ORF99089 - 3.7 4.8 6.5 5.1 4.4 6.5 1.2 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease AP3D1 PF06375.11 ORF99089 - 7.6 6.8 19.6 1.5 9.0 13.0 2.3 2 0 0 2 2 2 0 AP-3 complex subunit delta-1 PsbU PF06514.11 ORF98589 - 2.9e-24 84.9 0.1 3.9e-24 84.5 0.1 1.2 1 0 0 1 1 1 1 Photosystem II 12 kDa extrinsic protein (PsbU) HHH_3 PF12836.7 ORF98589 - 0.0066 16.7 0.0 0.017 15.3 0.0 1.8 1 1 0 1 1 1 1 Helix-hairpin-helix motif TPR_2 PF07719.17 ORF96548 - 1e-11 44.0 1.1 1.2e-05 25.1 0.2 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF96548 - 6.8e-09 35.2 0.2 4.7e-05 23.0 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF96548 - 1.5e-08 34.2 2.3 0.0012 18.5 0.1 2.5 1 1 1 2 2 2 2 TPR repeat TPR_9 PF13371.6 ORF96548 - 1.6e-06 28.2 2.5 1.6e-06 28.2 2.5 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF96548 - 2.5e-06 27.8 12.2 0.0014 19.3 1.9 3.5 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF96548 - 8.9e-05 22.4 0.0 0.12 12.6 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF96548 - 0.0014 18.9 0.9 0.76 10.3 0.1 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat DUF3856 PF12968.7 ORF96548 - 0.002 18.2 0.6 1.5 8.9 0.0 2.2 1 1 1 2 2 2 2 Domain of Unknown Function (DUF3856) TPR_7 PF13176.6 ORF96548 - 0.0027 17.6 4.0 0.19 11.8 0.3 3.4 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF96548 - 0.0037 17.1 2.4 0.39 10.6 0.8 2.9 2 0 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF96548 - 0.0096 16.0 0.3 0.14 12.3 0.2 2.2 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 ORF96548 - 0.0097 16.2 6.8 0.33 11.3 0.5 2.6 2 1 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF96548 - 0.083 13.6 15.2 0.32 11.7 3.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF96548 - 0.093 13.2 4.4 0.57 10.7 0.9 2.4 1 1 1 2 2 2 0 Tetratricopeptide repeat Thioredoxin PF00085.20 ORF96315 - 8.3e-16 57.9 0.0 1.3e-15 57.3 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_9 PF14595.6 ORF96315 - 0.057 13.2 0.0 0.08 12.7 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin TraF PF13728.6 ORF96315 - 0.09 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein Ank_2 PF12796.7 ORF95936 - 1.6e-38 131.2 4.5 1.2e-15 57.9 0.0 2.6 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF95936 - 3.1e-29 101.0 2.6 4.7e-09 36.6 0.1 3.5 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF95936 - 2.5e-21 75.4 5.5 2.9e-06 27.4 0.1 5.0 1 1 3 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF95936 - 1.4e-18 65.1 0.6 0.0045 17.4 0.0 5.1 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF95936 - 1.8e-18 66.1 6.2 5.8e-05 23.3 0.0 4.7 5 0 0 5 5 5 4 Ankyrin repeat AT_hook PF02178.19 ORF93535 - 0.0055 16.4 2.2 0.024 14.5 2.2 2.2 1 0 0 1 1 1 1 AT hook motif BRCC36_C PF18110.1 ORF93535 - 0.033 14.3 1.3 0.055 13.6 0.6 1.9 1 1 0 1 1 1 0 BRCC36 C-terminal helical domain Peptidase_S10 PF00450.22 ORF92856 - 5.4e-41 141.4 1.2 6.5e-41 141.1 1.1 1.2 1 1 0 1 1 1 1 Serine carboxypeptidase Aldedh PF00171.22 ORF9203 - 3.8e-47 160.9 0.0 4.2e-47 160.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Elong-fact-P_C PF09285.11 ORF90998 - 2e-26 91.5 0.5 5.1e-26 90.2 0.5 1.7 1 0 0 1 1 1 1 Elongation factor P, C-terminal EFP_N PF08207.12 ORF90998 - 4.2e-24 84.3 0.0 1.5e-23 82.6 0.0 1.9 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 ORF90998 - 6.3e-23 80.6 0.0 1.2e-22 79.7 0.0 1.5 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain Period_C PF12114.8 ORF89433 - 0.0056 16.3 0.4 0.0084 15.7 0.4 1.2 1 0 0 1 1 1 1 Period protein 2/3C-terminal region Pkinase PF00069.25 ORF84216 - 1.3e-12 47.6 0.3 5.3e-12 45.7 0.0 1.8 2 0 0 2 2 2 1 Protein kinase domain CsoSCA PF08936.10 ORF84216 - 0.089 11.4 0.1 0.12 11.0 0.1 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase Homeodomain PF00046.29 ORF84132 - 0.00087 19.1 2.5 0.002 17.9 2.5 1.6 1 0 0 1 1 1 1 Homeodomain Nicastrin PF05450.15 ORF83418 - 0.16 11.4 0.0 0.24 10.8 0.0 1.2 1 0 0 1 1 1 0 Nicastrin MORN PF02493.20 ORF83162 - 3e-23 80.3 20.8 1.3e-05 24.7 0.5 5.7 6 0 0 6 6 6 5 MORN repeat Borrelia_P83 PF05262.11 ORF80911 - 0.09 11.3 13.6 0.11 11.0 13.6 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF5523 PF17661.1 ORF80911 - 0.14 11.8 11.3 0.18 11.5 11.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5523) Spc7 PF08317.11 ORF80911 - 0.21 10.4 12.8 0.26 10.1 12.8 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein ALMT PF11744.8 ORF80911 - 0.72 8.6 7.8 0.86 8.4 7.8 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter GARP PF16731.5 ORF80911 - 0.95 9.1 23.1 0.42 10.3 20.1 1.7 1 1 1 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma Exonuc_VII_L PF02601.15 ORF80911 - 1.8 8.1 10.9 2.2 7.8 10.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3584 PF12128.8 ORF80911 - 2.1 5.8 22.7 2.3 5.6 22.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Presenilin PF01080.17 ORF80911 - 2.7 6.7 7.6 3 6.5 7.6 1.1 1 0 0 1 1 1 0 Presenilin Peptidase_S66 PF02016.15 ORF80911 - 3.7 7.7 4.8 4.6 7.4 4.1 1.5 1 1 0 1 1 1 0 LD-carboxypeptidase N-terminal domain Alanine_zipper PF11839.8 ORF80911 - 8.3 6.9 33.1 8.6 6.8 30.0 2.3 2 1 0 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein Macoilin PF09726.9 ORF80911 - 9.4 4.7 16.1 11 4.5 16.1 1.1 1 0 0 1 1 1 0 Macoilin family ASF1_hist_chap PF04729.13 ORF80035 - 7.5e-34 116.9 0.0 8.8e-34 116.7 0.0 1.1 1 0 0 1 1 1 1 ASF1 like histone chaperone TetR_C_28 PF17937.1 ORF79457 - 0.014 15.8 3.4 0.056 13.9 2.1 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain ECH_1 PF00378.20 ORF77574 - 1.2e-39 136.1 0.0 1.4e-39 135.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF77574 - 3.4e-20 72.8 0.1 7.3e-19 68.4 0.1 1.9 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase BK_channel_a PF03493.18 ORF77079 - 0.12 12.6 0.3 0.2 11.8 0.3 1.4 1 1 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit Sod_Fe_C PF02777.18 ORF76604 - 2.2e-40 136.9 0.0 3.5e-40 136.3 0.0 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 ORF76604 - 1.1e-13 51.4 0.8 2e-13 50.6 0.8 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Cytochrome_C7 PF14522.6 ORF76558 - 9.4e-09 35.2 20.1 0.00031 20.7 10.1 3.2 1 1 3 4 4 4 4 Cytochrome c7 and related cytochrome c Paired_CXXCH_1 PF09699.10 ORF76558 - 2.2e-08 33.7 24.8 6.8e-05 22.5 5.2 3.7 2 1 0 3 3 3 3 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_C554 PF13435.6 ORF76558 - 1.4e-07 32.3 11.5 0.0093 16.9 1.0 3.1 3 0 0 3 3 3 2 Cytochrome c554 and c-prime Cytochrom_c3_2 PF14537.6 ORF76558 - 3.4e-07 30.6 21.0 2e-05 25.0 13.9 3.0 1 1 1 2 2 2 2 Cytochrome c3 Cytochrom_CIII PF02085.16 ORF76558 - 8.9e-06 26.0 20.7 0.026 14.9 5.7 3.5 1 1 2 3 3 3 3 Class III cytochrome C family Cytochrom_C552 PF02335.15 ORF76558 - 0.00042 19.4 3.6 0.00042 19.4 3.6 3.0 1 1 1 2 2 2 1 Cytochrome c552 Cytochrom_NNT PF03264.14 ORF76558 - 0.02 14.6 23.1 0.077 12.7 3.7 3.4 1 1 4 5 5 5 0 NapC/NirT cytochrome c family, N-terminal region DUF1924 PF09086.11 ORF76558 - 0.023 15.1 21.8 0.11 12.9 0.6 4.9 1 1 4 5 5 5 0 Domain of unknown function (DUF1924) zf-C4pol PF14260.6 ORF76558 - 0.16 12.5 10.4 0.64 10.5 4.7 3.0 1 1 2 3 3 3 0 C4-type zinc-finger of DNA polymerase delta NapB PF03892.14 ORF76558 - 0.24 11.4 20.3 0.82 9.7 8.1 3.5 1 1 0 2 2 2 0 Nitrate reductase cytochrome c-type subunit (NapB) DZR PF12773.7 ORF76558 - 0.58 10.2 17.1 1.1e+03 -0.3 17.0 3.5 1 1 0 1 1 1 0 Double zinc ribbon FYVE_2 PF02318.16 ORF76558 - 0.74 10.0 7.1 0.19 12.0 1.4 2.2 1 1 1 2 2 2 0 FYVE-type zinc finger Cytochrome_CBB3 PF13442.6 ORF76558 - 1.9 8.9 24.1 26 5.2 0.6 5.3 1 1 3 5 5 5 0 Cytochrome C oxidase, cbb3-type, subunit III Stc1 PF12898.7 ORF76558 - 5 7.8 11.8 7.9e+02 0.7 11.8 3.0 1 1 0 1 1 1 0 Stc1 domain zf-CHY PF05495.12 ORF76558 - 6.6 7.3 19.6 1.9 9.0 2.4 3.3 1 1 1 2 2 2 0 CHY zinc finger NLPC_P60 PF00877.19 ORF76401 - 1.6e-34 118.1 0.1 2.2e-34 117.6 0.1 1.2 1 0 0 1 1 1 1 NlpC/P60 family Peptidase_C92 PF05708.12 ORF76401 - 0.00067 19.8 0.0 0.62 10.1 0.0 2.3 1 1 1 2 2 2 2 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family LRAT PF04970.13 ORF76401 - 0.019 15.3 0.0 0.04 14.2 0.0 1.5 1 0 0 1 1 1 0 Lecithin retinol acyltransferase DHQS PF01959.16 ORF76401 - 0.03 13.2 0.0 0.048 12.6 0.0 1.2 1 0 0 1 1 1 0 3-dehydroquinate synthase II CHAP PF05257.16 ORF76401 - 0.076 13.6 0.0 0.13 12.9 0.0 1.4 1 0 0 1 1 1 0 CHAP domain DUF1287 PF06940.11 ORF76401 - 0.11 12.2 0.0 0.29 10.8 0.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF1287) tRNA_U5-meth_tr PF05958.11 ORF76103 - 3.6e-29 101.9 0.0 5.8e-28 97.9 0.0 1.9 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 ORF76103 - 3.2e-14 53.0 0.0 4e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF76103 - 1.3e-09 38.7 0.0 2.3e-09 37.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF76103 - 6.3e-08 32.6 0.0 9.3e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 ORF76103 - 9.9e-08 31.4 0.0 1.4e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Met_10 PF02475.16 ORF76103 - 6.1e-07 29.4 0.1 7.3e-07 29.1 0.1 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_11 PF08241.12 ORF76103 - 3.9e-06 27.4 0.0 8.7e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF76103 - 2.5e-05 23.9 0.0 3.3e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 ORF76103 - 4.3e-05 23.2 0.0 5.8e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 ORF76103 - 0.00019 21.3 0.0 0.00023 21.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 ORF76103 - 0.00048 19.8 0.0 0.00073 19.2 0.0 1.3 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_15 PF09445.10 ORF76103 - 0.00061 19.4 0.0 0.00079 19.0 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_4 PF02390.17 ORF76103 - 0.00071 19.1 0.0 0.001 18.6 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Ubie_methyltran PF01209.18 ORF76103 - 0.0024 17.2 0.0 0.0036 16.7 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family UPF0020 PF01170.18 ORF76103 - 0.003 17.3 0.0 0.043 13.5 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.13 ORF76103 - 0.0076 15.7 0.0 0.01 15.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MetW PF07021.12 ORF76103 - 0.013 15.1 0.0 0.14 11.7 0.0 2.1 1 1 1 2 2 2 0 Methionine biosynthesis protein MetW CMAS PF02353.20 ORF76103 - 0.038 13.3 0.0 0.051 12.9 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase TPMT PF05724.11 ORF76103 - 0.047 13.3 0.0 0.09 12.4 0.0 1.4 2 0 0 2 2 2 0 Thiopurine S-methyltransferase (TPMT) Methyltrans_SAM PF10672.9 ORF76103 - 0.05 12.8 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase DOT1 PF08123.13 ORF76103 - 0.084 12.4 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 Syntaxin-6_N PF09177.11 ORF7585 - 0.036 14.6 6.4 0.042 14.4 2.3 2.6 2 1 1 3 3 3 0 Syntaxin 6, N-terminal Tektin PF03148.14 ORF7585 - 0.05 12.4 6.2 0.013 14.3 2.0 1.9 1 1 1 2 2 2 0 Tektin family YtxH PF12732.7 ORF7585 - 0.055 14.0 0.9 0.055 14.0 0.9 2.6 3 0 0 3 3 3 0 YtxH-like protein DUSP PF06337.12 ORF7585 - 0.081 13.6 2.9 0.17 12.5 2.9 1.5 1 1 0 1 1 1 0 DUSP domain FapA PF03961.13 ORF7585 - 0.1 11.1 4.7 0.13 10.9 4.7 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Sacchrp_dh_NADP PF03435.18 ORF7585 - 0.14 12.4 0.7 0.27 11.5 0.1 1.7 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain RFC1 PF08519.12 ORF7585 - 0.18 12.0 2.3 0.39 10.9 1.1 1.9 1 1 1 2 2 2 0 Replication factor RFC1 C terminal domain DUF4446 PF14584.6 ORF7585 - 0.3 11.0 4.7 0.067 13.2 1.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) Aldose_epim PF01263.20 ORF74987 - 6.7e-30 104.4 0.0 1e-28 100.5 0.0 1.9 1 1 0 1 1 1 1 Aldose 1-epimerase ZZ PF00569.17 ORF74914 - 0.11 12.3 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 Zinc finger, ZZ type Methyltransf_12 PF08242.12 ORF74914 - 0.14 13.0 0.0 0.2 12.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Myticin-prepro PF10690.9 ORF74281 - 7.5 6.9 7.3 0.57 10.5 1.7 1.9 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel Ricin_B_lectin PF00652.22 ORF73801 - 8e-08 32.6 0.8 7.8e-05 22.9 0.0 2.3 1 1 0 2 2 2 2 Ricin-type beta-trefoil lectin domain p450 PF00067.22 ORF7367 - 4.4e-37 127.9 0.0 5e-37 127.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 ProQ PF04352.13 ORF7367 - 0.065 13.1 0.0 2.8 7.9 0.0 2.1 1 1 1 2 2 2 0 ProQ/FINO family Coatomer_g_Cpla PF16381.5 ORF73472 - 0.055 13.6 0.6 0.093 12.9 0.6 1.3 1 0 0 1 1 1 0 Coatomer subunit gamma-1 C-terminal appendage platform RGM_C PF06534.13 ORF7212 - 0.0012 18.3 1.2 0.002 17.7 1.2 1.4 1 1 0 1 1 1 1 Repulsive guidance molecule (RGM) C-terminus Keratin_B2 PF01500.17 ORF69895 - 0.085 12.8 2.6 0.19 11.7 2.6 1.5 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Keratin_B2_2 PF13885.6 ORF69895 - 0.77 9.8 3.3 5.3 7.1 3.3 2.2 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein zf-Sec23_Sec24 PF04810.15 ORF69275 - 1.1e-07 31.8 5.9 3.2e-07 30.3 5.9 1.7 1 1 0 1 1 1 1 Sec23/Sec24 zinc finger ISP3_C PF18045.1 ORF68519 - 2.2e-10 40.4 0.4 3.9e-10 39.6 0.4 1.3 1 0 0 1 1 1 1 ISP3 C-terminal ISP1_C PF18161.1 ORF68519 - 8.3e-05 22.5 0.4 0.00022 21.2 0.4 1.7 1 1 0 1 1 1 1 ISP1 C-terminal Pkinase PF00069.25 ORF67317 - 2.1e-10 40.4 0.0 2.2e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67317 - 0.00047 19.5 0.0 0.00064 19.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF67317 - 0.016 14.5 0.3 0.029 13.7 0.3 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family CENP-B_dimeris PF09026.10 ORF67277 - 0.015 15.7 0.0 0.024 15.0 0.0 1.3 1 0 0 1 1 1 0 Centromere protein B dimerisation domain p25-alpha PF05517.12 ORF67277 - 0.018 15.2 0.2 0.039 14.1 0.2 1.6 1 0 0 1 1 1 0 p25-alpha Sfi1 PF08457.10 ORF6699 - 0.0023 16.5 4.9 0.0024 16.5 4.9 1.2 1 0 0 1 1 1 1 Sfi1 spindle body protein HTH_WhiA PF02650.14 ORF6699 - 0.12 12.8 5.8 0.2 12.0 1.0 3.2 1 1 0 2 2 2 0 WhiA C-terminal HTH domain Calici_MSP PF05752.11 ORF6699 - 0.33 10.8 5.4 0.16 11.8 0.4 2.3 1 1 1 2 2 2 0 Calicivirus minor structural protein FHIPEP PF00771.20 ORF6699 - 0.51 8.7 9.5 0.59 8.5 9.5 1.0 1 0 0 1 1 1 0 FHIPEP family Syntaxin_2 PF14523.6 ORF6699 - 0.69 10.3 11.3 0.18 12.2 4.7 2.6 1 1 2 3 3 3 0 Syntaxin-like protein Mst1_SARAH PF11629.8 ORF6699 - 3.5 7.8 6.4 1.5 8.9 0.2 3.2 2 1 2 4 4 4 0 C terminal SARAH domain of Mst1 Lact-deh-memb PF09330.11 ORF65998 - 1.1e-40 139.8 0.0 1.3e-40 139.6 0.0 1.0 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding FAD-oxidase_C PF02913.19 ORF65998 - 0.00032 20.4 0.2 0.0032 17.1 0.2 2.1 1 1 0 1 1 1 1 FAD linked oxidases, C-terminal domain Ribonuc_L-PSP PF01042.21 ORF65623 - 0.069 13.2 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Endoribonuclease L-PSP Glyco_transf_15 PF01793.16 ORF64775 - 4.5e-20 72.1 1.5 5.2e-20 71.9 1.5 1.0 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase ABC_tran PF00005.27 ORF64496 - 2.2e-15 57.4 0.0 3.2e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF64496 - 1.2e-07 31.5 0.2 1.4e-07 31.2 0.2 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain FKBP_N_2 PF18023.1 ORF64496 - 0.027 14.6 0.4 0.053 13.6 0.4 1.6 1 0 0 1 1 1 0 BDBT FKBP like N-terminal DDRGK PF09756.9 ORF64496 - 0.066 12.8 1.0 0.095 12.3 1.0 1.2 1 0 0 1 1 1 0 DDRGK domain S-AdoMet_synt_N PF00438.20 ORF64496 - 0.11 13.2 0.2 0.17 12.6 0.2 1.4 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, N-terminal domain SbcCD_C PF13558.6 ORF64496 - 0.17 12.2 0.1 2.6 8.3 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit EF-hand_6 PF13405.6 ORF64310 - 0.016 15.1 0.1 0.43 10.6 0.6 2.6 2 0 0 2 2 2 0 EF-hand domain Ribosomal_L6 PF00347.23 ORF61617 - 2.8e-28 98.4 4.7 1.9e-16 60.5 0.2 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 DUF1493 PF07377.12 ORF61617 - 0.12 12.8 0.1 0.28 11.7 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) PA14 PF07691.12 ORF60443 - 5.2e-14 52.3 0.0 7.3e-14 51.8 0.0 1.2 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 ORF60443 - 0.034 14.6 0.0 0.049 14.1 0.0 1.3 1 0 0 1 1 1 0 GLEYA domain UvrB PF12344.8 ORF59645 - 9.9e-23 79.7 0.1 2.1e-22 78.7 0.1 1.6 1 0 0 1 1 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 ORF59645 - 3.4e-10 40.3 0.0 7.5e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UVR PF02151.19 ORF59645 - 1.7e-07 30.8 1.2 3.3e-07 29.8 1.2 1.5 1 0 0 1 1 1 1 UvrB/uvrC motif IF2_N PF04760.15 ORF59645 - 0.0078 16.0 0.9 0.022 14.6 0.1 2.1 2 0 0 2 2 2 1 Translation initiation factor IF-2, N-terminal region ARF7EP_C PF14949.6 ORF59191 - 1 10.0 7.9 1.3 9.7 1.4 2.2 2 0 0 2 2 2 0 ARF7 effector protein C-terminus Methyltransf_25 PF13649.6 ORF57223 - 6.9e-10 39.5 0.0 1.3e-09 38.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF57223 - 3.9e-09 36.5 0.0 6.1e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF57223 - 2.4e-07 30.8 0.0 2.7e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF57223 - 2.1e-06 28.3 0.0 3.1e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF57223 - 7.9e-06 26.5 0.0 1.2e-05 26.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF57223 - 0.00043 19.9 0.0 0.00061 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF57223 - 0.0019 18.2 0.0 0.0037 17.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 ORF57223 - 0.0022 17.0 0.0 0.0031 16.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MetW PF07021.12 ORF57223 - 0.016 14.8 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW PrmA PF06325.13 ORF57223 - 0.046 13.1 0.0 0.056 12.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.18 ORF57223 - 0.058 12.7 0.0 0.074 12.4 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family DREV PF05219.12 ORF57223 - 0.096 11.8 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase DUF997 PF06196.12 ORF54747 - 0.032 14.2 0.8 0.076 13.0 0.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF997) Ank_2 PF12796.7 ORF53339 - 1.4e-21 76.8 0.1 3.3e-14 53.2 0.1 2.8 1 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF53339 - 5.9e-20 70.8 6.7 1.6e-05 25.1 0.2 4.5 5 1 0 5 5 5 3 Ankyrin repeat Ank_4 PF13637.6 ORF53339 - 8.9e-19 67.6 1.6 1.4e-11 44.6 0.2 4.4 3 2 2 5 5 5 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF53339 - 3.9e-17 62.1 2.9 5e-07 29.9 0.2 4.3 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF53339 - 4.9e-17 60.3 1.7 8.1e-05 22.7 0.1 4.2 5 0 0 5 5 5 3 Ankyrin repeat DUF4284 PF14112.6 ORF51921 - 0.17 12.8 5.4 0.4 11.6 5.4 1.7 1 1 0 1 1 1 0 Immunity protein 22 Keratin_B2 PF01500.17 ORF51530 - 0.085 12.8 2.6 0.19 11.7 2.6 1.5 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Keratin_B2_2 PF13885.6 ORF51530 - 0.77 9.8 3.3 5.3 7.1 3.3 2.2 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Hydrolase_3 PF08282.12 ORF49123 - 1.5e-12 47.8 0.0 4.4e-11 43.0 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 ORF49123 - 0.00097 19.3 0.4 0.013 15.6 0.0 2.5 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF49123 - 0.0024 18.2 0.0 0.03 14.6 0.0 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 ORF49123 - 0.0082 15.7 0.0 0.12 11.9 0.0 2.0 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase ERGIC_N PF13850.6 ORF46349 - 0.0069 16.7 0.6 0.011 16.1 0.3 1.6 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Arch_flagellin PF01917.16 ORF46349 - 5.9 7.1 12.3 1.3e+03 -0.5 12.3 2.5 1 1 0 1 1 1 0 Archaebacterial flagellin Con-6 PF10346.9 ORF44269 - 0.15 12.1 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Conidiation protein 6 TBCC PF07986.12 ORF42976 - 2.3e-08 33.8 0.9 3.2e-08 33.3 0.1 1.7 2 1 0 2 2 2 1 Tubulin binding cofactor C Plasmodium_Vir PF05795.11 ORF42678 - 0.0008 18.9 2.1 0.001 18.6 2.1 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF42678 - 0.0013 17.7 4.7 0.0013 17.7 4.7 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF42678 - 0.0085 16.3 0.0 0.23 11.8 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) DUF2208 PF09973.9 ORF42678 - 0.023 14.3 1.6 2.4 7.7 0.1 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2208) Spore_coat_CotO PF14153.6 ORF42678 - 0.031 14.2 17.2 0.044 13.7 17.2 1.2 1 0 0 1 1 1 0 Spore coat protein CotO SLC12 PF03522.15 ORF42678 - 0.031 13.3 5.5 0.033 13.2 5.5 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Hid1 PF12722.7 ORF42678 - 0.042 12.0 6.6 0.048 11.8 6.6 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein BSMAP PF12280.8 ORF42678 - 0.052 13.8 6.5 0.19 11.9 6.5 1.8 1 1 0 1 1 1 0 Brain specific membrane anchored protein Serinc PF03348.15 ORF42678 - 0.055 12.4 6.3 0.66 8.8 6.3 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) CDC45 PF02724.14 ORF42678 - 0.056 11.7 15.7 0.06 11.6 15.7 1.1 1 0 0 1 1 1 0 CDC45-like protein CSG2 PF16965.5 ORF42678 - 0.06 12.3 3.6 0.15 11.0 3.6 1.7 1 1 0 1 1 1 0 Ceramide synthase regulator TRP PF06011.12 ORF42678 - 0.068 11.9 0.0 0.1 11.3 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel Tho2 PF11262.8 ORF42678 - 0.078 12.2 5.3 0.1 11.8 5.3 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 LAP1C PF05609.12 ORF42678 - 0.084 11.9 9.4 0.099 11.7 9.4 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) GWT1 PF06423.12 ORF42678 - 0.1 12.7 2.8 0.63 10.2 2.8 2.0 1 1 0 1 1 1 0 GWT1 Connexin PF00029.19 ORF42678 - 0.11 12.3 10.8 1.9 8.2 10.8 2.0 1 1 0 1 1 1 0 Connexin RR_TM4-6 PF06459.12 ORF42678 - 0.11 12.3 18.0 0.15 11.9 18.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 OppC_N PF12911.7 ORF42678 - 0.12 12.4 4.1 1.9 8.5 2.2 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C MFS_1_like PF12832.7 ORF42678 - 0.13 11.1 0.0 0.19 10.6 0.0 1.4 1 1 0 1 1 1 0 MFS_1 like family SARAF PF06682.12 ORF42678 - 0.18 11.4 1.1 3.6 7.1 0.3 2.0 1 1 1 2 2 2 0 SOCE-associated regulatory factor of calcium homoeostasis FAM60A PF15396.6 ORF42678 - 0.33 10.9 4.9 0.38 10.7 4.9 1.2 1 0 0 1 1 1 0 Protein Family FAM60A DUF2828 PF11443.8 ORF42678 - 0.43 8.6 7.6 0.56 8.2 7.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) PA26 PF04636.13 ORF42678 - 0.56 9.1 7.0 0.65 8.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) V_ATPase_I PF01496.19 ORF42678 - 0.6 8.0 10.3 0.76 7.6 10.3 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2207 PF09972.9 ORF42678 - 0.72 8.5 7.5 0.048 12.4 1.5 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) CENP-N PF05238.13 ORF42678 - 0.8 8.9 8.1 0.89 8.8 8.1 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like ALMT PF11744.8 ORF42678 - 0.8 8.5 6.7 1.2 7.9 6.7 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF42678 - 0.92 7.9 14.8 0.94 7.9 14.8 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SID-1_RNA_chan PF13965.6 ORF42678 - 0.95 7.8 8.0 1.6 7.0 8.0 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF42678 - 1.5 7.8 7.6 3.5 6.6 7.6 1.7 1 1 0 1 1 1 0 CLN3 protein Granin PF01271.17 ORF42678 - 1.9 7.3 34.7 2.2 7.1 34.7 1.0 1 0 0 1 1 1 0 Granin (chromogranin or secretogranin) CCSAP PF15748.5 ORF42678 - 3.9 7.6 17.7 4.9 7.3 17.7 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated DUF4045 PF13254.6 ORF42678 - 5.5 6.5 16.1 6.6 6.3 16.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) NPR3 PF03666.13 ORF42678 - 7 5.3 13.4 8.3 5.1 13.4 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF2370 PF10176.9 ORF42678 - 9.8 5.8 6.0 29 4.2 6.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) Ricin_B_lectin PF00652.22 ORF42631 - 2.5e-05 24.5 0.6 0.061 13.6 0.2 2.3 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain Macro PF01661.21 ORF40603 - 1e-33 115.9 0.1 1.7e-33 115.1 0.1 1.5 1 0 0 1 1 1 1 Macro domain DUF1264 PF06884.11 ORF40603 - 0.042 13.4 0.0 0.058 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1264) Lebercilin PF15619.6 ORF38646 - 0.32 10.6 10.6 0.22 11.2 5.6 2.3 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease zf-RING_9 PF13901.6 ORF38646 - 0.33 10.9 5.3 0.38 10.7 3.7 1.7 1 1 1 2 2 2 0 Putative zinc-RING and/or ribbon Occludin_ELL PF07303.13 ORF38646 - 5.5 7.8 13.0 1.5 9.6 7.8 2.3 2 1 0 2 2 2 0 Occludin homology domain WDCP PF15390.6 ORF37863 - 0.16 10.3 5.9 0.19 10.1 5.9 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family PAP2 PF01569.21 ORF37787 - 0.03 14.1 0.6 0.048 13.4 0.6 1.3 1 0 0 1 1 1 0 PAP2 superfamily HAD_2 PF13419.6 ORF36410 - 3.5e-29 102.1 0.0 4e-29 101.9 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF36410 - 5.8e-18 65.9 0.1 3e-17 63.6 0.1 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF36410 - 1.5e-05 25.5 0.2 2.6e-05 24.7 0.2 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF36410 - 4.7e-05 23.4 0.1 0.00017 21.6 0.0 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like ERGIC_N PF13850.6 ORF36234 - 0.0069 16.7 0.6 0.011 16.1 0.3 1.6 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Arch_flagellin PF01917.16 ORF36234 - 5.9 7.1 12.3 1.3e+03 -0.5 12.3 2.5 1 1 0 1 1 1 0 Archaebacterial flagellin Ccdc124 PF06244.12 ORF35485 - 1.8e-22 80.3 33.9 1.1e-19 71.3 33.9 2.2 1 1 0 1 1 1 1 Coiled-coil domain-containing protein 124 /Oxs1 DUF3921 PF13060.6 ORF35485 - 0.005 16.8 0.4 1.1 9.3 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF3921) DUF533 PF04391.12 ORF35485 - 1.8 8.1 9.1 16 5.0 9.1 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF533) YABBY PF04690.13 ORF35485 - 4 8.0 18.1 3.4e+02 1.7 18.1 2.1 1 1 0 1 1 1 0 YABBY protein Pex24p PF06398.11 ORF33737 - 0.0069 15.4 2.5 0.0087 15.1 2.5 1.1 1 0 0 1 1 1 1 Integral peroxisomal membrane peroxin DUF2634 PF10934.8 ORF33724 - 0.0085 16.2 1.0 0.39 10.9 0.0 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF2634) PKcGMP_CC PF16808.5 ORF33724 - 0.042 13.7 0.1 0.042 13.7 0.1 2.2 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Imm39 PF15568.6 ORF33724 - 0.079 13.1 0.5 0.23 11.6 0.2 1.8 1 1 1 2 2 2 0 Immunity protein 39 FAM76 PF16046.5 ORF33724 - 1.6 8.0 7.1 1.8 7.9 7.1 1.2 1 0 0 1 1 1 0 FAM76 protein DUF641 PF04859.12 ORF33724 - 2.2 8.6 8.1 1.3 9.4 4.5 2.5 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) BK_channel_a PF03493.18 ORF31575 - 0.12 12.6 0.3 0.2 11.8 0.3 1.4 1 1 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit MutS_III PF05192.18 ORF31429 - 0.29 11.3 7.6 0.44 10.7 7.6 1.3 1 1 0 1 1 1 0 MutS domain III Ku_C PF03730.14 ORF31429 - 0.38 11.5 11.3 18 6.1 11.3 2.3 1 1 0 1 1 1 0 Ku70/Ku80 C-terminal arm DUF4522 PF15022.6 ORF31429 - 1.4 9.2 7.6 0.64 10.3 4.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4522) Peptidase_M24 PF00557.24 ORF28642 - 0.00014 21.6 0.0 0.00017 21.4 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 MORN PF02493.20 ORF28609 - 3e-23 80.3 20.8 1.3e-05 24.7 0.5 5.7 6 0 0 6 6 6 5 MORN repeat MFS_1 PF07690.16 ORF24049 - 4.7e-06 25.8 19.8 1.1e-05 24.5 19.8 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF24049 - 0.014 14.2 10.7 0.018 13.9 10.7 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter IAT_beta PF11924.8 ORF22571 - 0.087 12.2 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Inverse autotransporter, beta-domain 3-dmu-9_3-mt PF06983.13 ORF2227 - 0.2 12.2 0.9 4.3 7.9 0.1 2.6 2 1 1 3 3 3 0 3-demethylubiquinone-9 3-methyltransferase WDCP PF15390.6 ORF20803 - 0.16 10.3 5.9 0.19 10.1 5.9 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Baculo_PEP_C PF04513.12 ORF20381 - 0.057 13.5 0.0 0.094 12.8 0.0 1.3 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus WD40 PF00400.32 ORF19430 - 3.7e-11 43.4 0.5 0.063 14.2 0.1 3.5 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF19430 - 1e-10 41.8 0.4 0.00018 21.7 0.1 2.9 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Coatomer_WDAD PF04053.14 ORF19430 - 0.0021 17.2 0.0 0.0048 16.0 0.0 1.6 1 1 0 1 1 1 1 Coatomer WD associated region WD40_like PF17005.5 ORF19430 - 0.0039 16.6 0.0 0.31 10.3 0.0 2.0 1 1 1 2 2 2 2 WD40-like domain Cytochrom_D1 PF02239.16 ORF19430 - 0.012 14.1 0.0 0.044 12.3 0.0 1.7 1 1 1 2 2 2 0 Cytochrome D1 heme domain RAB3GAP2_N PF14655.6 ORF19430 - 0.054 12.8 0.0 0.062 12.6 0.0 1.2 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit N-terminus SMAP PF15477.6 ORF16102 - 0.0062 17.5 1.5 0.0062 17.5 1.5 2.7 1 1 1 2 2 2 1 Small acidic protein family ERM PF00769.19 ORF16102 - 0.043 13.6 21.4 0.048 13.5 21.4 1.2 1 0 0 1 1 1 0 Ezrin/radixin/moesin family IFT57 PF10498.9 ORF16102 - 0.097 11.6 14.0 0.15 11.0 14.0 1.3 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Fez1 PF06818.15 ORF16102 - 0.11 12.9 15.0 0.15 12.5 15.0 1.2 1 0 0 1 1 1 0 Fez1 zf-C4H2 PF10146.9 ORF16102 - 0.24 11.7 11.4 0.36 11.1 11.4 1.3 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4407 PF14362.6 ORF16102 - 0.35 10.2 16.7 0.44 9.8 16.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AAA_13 PF13166.6 ORF16102 - 0.4 9.3 16.6 0.48 9.0 16.6 1.1 1 0 0 1 1 1 0 AAA domain DUF3435 PF11917.8 ORF16102 - 0.64 8.9 9.8 0.85 8.5 9.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) V_ATPase_I PF01496.19 ORF16102 - 7.6 4.3 11.8 9.7 4.0 11.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CIAPIN1 PF05093.13 ORF16102 - 8.3 7.0 9.2 7.5 7.1 7.3 1.9 1 1 1 2 2 2 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis Pkinase PF00069.25 ORF14578 - 0.0051 16.2 0.0 0.0063 15.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Ribosomal_S7 PF00177.21 ORF11479 - 5.3e-38 130.0 1.1 6.5e-38 129.7 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e HD_6 PF18019.1 ORF111755 - 0.082 13.0 0.2 0.1 12.7 0.2 1.2 1 0 0 1 1 1 0 HD domain Ribosomal_L12 PF00542.19 ORF11040 - 7.4e-22 77.5 1.9 1.3e-21 76.7 1.9 1.4 1 0 0 1 1 1 1 Ribosomal protein L7/L12 C-terminal domain CDC73_N PF16050.5 ORF110127 - 6.6e-11 42.1 3.2 7.5e-11 41.9 3.2 1.0 1 0 0 1 1 1 1 Paf1 complex subunit CDC73 N-terminal DUF4284 PF14112.6 ORF108942 - 0.17 12.8 5.4 0.4 11.6 5.4 1.7 1 1 0 1 1 1 0 Immunity protein 22 Arf PF00025.21 ORF108754 - 4.8e-37 127.1 0.0 5.7e-37 126.9 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF108754 - 5.4e-06 26.6 0.0 8.6e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF108754 - 0.00012 21.7 0.0 0.00017 21.3 0.0 1.2 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF108754 - 0.00047 19.4 0.0 0.0011 18.3 0.0 1.6 1 1 0 1 1 1 1 G-protein alpha subunit MMR_HSR1 PF01926.23 ORF108754 - 0.019 15.0 0.0 0.046 13.8 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF108754 - 0.025 13.9 0.0 0.032 13.6 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF108754 - 0.047 13.1 0.0 0.07 12.5 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit MYEOV2 PF15004.6 ORF108754 - 0.17 12.3 1.0 0.34 11.4 0.6 1.7 2 0 0 2 2 2 0 Myeloma-overexpressed-like YL1 PF05764.13 ORF105331 - 0.0043 17.2 12.1 0.005 17.0 12.1 1.2 1 0 0 1 1 1 1 YL1 nuclear protein Efg1 PF10153.9 ORF105331 - 2.1 8.8 11.2 11 6.4 8.3 2.2 2 0 0 2 2 2 0 rRNA-processing protein Efg1 DNA_pol_A_exo1 PF01612.20 ORF103274 - 1.5e-07 31.3 0.0 5.4e-07 29.5 0.0 1.7 1 1 0 1 1 1 1 3'-5' exonuclease TTL PF03133.15 ORF102148 - 2.6e-21 76.1 0.1 4.2e-21 75.3 0.1 1.3 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF102148 - 9.7e-06 25.0 0.1 2.3e-05 23.8 0.0 1.6 2 0 0 2 2 2 1 YheC/D like ATP-grasp Dala_Dala_lig_C PF07478.13 ORF102148 - 0.017 14.7 0.2 0.042 13.4 0.0 1.6 2 0 0 2 2 2 0 D-ala D-ala ligase C-terminus ATPgrasp_ST PF14397.6 ORF102148 - 0.055 12.7 0.0 0.079 12.2 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Complex1_49kDa PF00346.19 ORF102148 - 0.093 11.8 0.0 0.16 11.0 0.0 1.4 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sugar_tr PF00083.24 ORF101979 - 5.5e-13 48.6 8.2 6.7e-13 48.3 8.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF1232 PF06803.12 ORF101979 - 0.054 13.3 2.9 0.054 13.3 2.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1232) MFS_1 PF07690.16 ORF101979 - 8.2 5.2 16.3 0.13 11.2 1.0 2.6 1 1 1 2 2 2 0 Major Facilitator Superfamily Trans_coact PF16805.5 NODE_37959_length_559_cov_41.629771_g30671_i0reverse_frame_1 - 0.044 13.9 0.1 0.1 12.7 0.1 1.6 1 0 0 1 1 1 0 Phage late-transcription coactivator GalP_UDP_tr_C PF02744.17 NODE_37918_length_560_cov_2.346667_g30632_i0reverse_frame_1 - 0.021 14.6 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain Cnn_1N PF07989.11 NODE_37913_length_560_cov_3.617143_g30627_i0forward_frame_1 - 0.0098 16.0 5.5 0.021 15.0 5.5 1.5 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 HemolysinCabind PF00353.19 NODE_37911_length_560_cov_6.885714_g30625_i0forward_frame_1 - 7.9e-20 70.5 39.5 1.4e-10 41.0 17.2 3.6 4 0 0 4 4 4 2 RTX calcium-binding nonapeptide repeat (4 copies) HCBP_related PF06594.11 NODE_37911_length_560_cov_6.885714_g30625_i0forward_frame_1 - 2.5e-08 33.7 1.4 6.3e-08 32.4 0.2 2.4 2 0 0 2 2 2 1 Haemolysin-type calcium binding protein related domain DUF4143 PF13635.6 NODE_37908_length_560_cov_69.495238_g30622_i0forward_frame_1 - 0.15 12.2 0.0 0.15 12.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4143) CDC45 PF02724.14 NODE_37891_length_560_cov_151.500952_g30606_i0reverse_frame_1 - 0.69 8.1 4.8 0.88 7.8 4.8 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF5552 PF17706.1 NODE_37882_length_560_cov_447.097143_g30599_i0forward_frame_1 - 0.1 12.3 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5552) FNIP PF05725.12 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 2.4e-70 232.5 52.1 9.2e-13 48.1 1.1 5.0 2 1 5 7 7 7 7 FNIP Repeat LRR_5 PF13306.6 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 1.2e-09 38.2 1.8 0.00014 21.8 0.1 2.7 1 1 2 3 3 3 3 BspA type Leucine rich repeat region (6 copies) NosD PF05048.13 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 0.00048 19.5 0.0 0.00056 19.2 0.0 1.2 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Glyco_hydro_65C PF03633.15 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 0.0033 17.3 7.5 75 3.4 0.0 7.4 9 0 0 9 9 9 0 Glycosyl hydrolase family 65, C-terminal domain Imm40 PF15569.6 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 0.005 16.9 0.0 2.7 8.1 0.0 3.8 1 1 4 5 5 5 1 Immunity protein 40 DUF5315 PF17242.2 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 0.12 12.2 7.6 12 5.8 0.1 5.7 2 2 6 8 8 8 0 Disordered region of unknown function (DUF5315) Peptidase_M16_C PF05193.21 NODE_37880_length_560_cov_770.554286_g30598_i0forward_frame_1 - 0.0069 16.4 0.1 21 5.0 0.0 4.8 1 1 3 4 4 4 2 Peptidase M16 inactive domain DUF3981 PF13139.6 NODE_37872_length_560_cov_29317.011429_g30592_i0reverse_frame_1 - 0.00083 19.7 0.3 0.0013 19.1 0.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3981) Kringle PF00051.18 NODE_37869_length_561_cov_2.517110_g30589_i0reverse_frame_1 - 0.03 14.6 0.1 2.1 8.7 0.0 2.2 2 0 0 2 2 2 0 Kringle domain PI3Ka PF00613.20 NODE_37868_length_561_cov_2.634981_g30588_i0forward_frame_1 - 6.2e-15 55.1 0.1 8.3e-15 54.7 0.1 1.1 1 0 0 1 1 1 1 Phosphoinositide 3-kinase family, accessory domain (PIK domain) PI3K_C2 PF00792.24 NODE_37868_length_561_cov_2.634981_g30588_i0forward_frame_1 - 0.00034 20.6 0.0 0.00072 19.5 0.0 1.6 1 0 0 1 1 1 1 Phosphoinositide 3-kinase C2 Gpr1_Fun34_YaaH PF01184.19 NODE_37866_length_561_cov_2.870722_g30586_i0forward_frame_1 - 9.6e-31 107.0 16.7 1.3e-30 106.6 16.7 1.1 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family HTH_1 PF00126.27 NODE_37865_length_561_cov_3.131179_g30585_i0reverse_frame_1 - 1.6e-18 66.4 2.5 3.3e-18 65.4 1.5 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family Abp2 PF09441.10 NODE_37857_length_561_cov_60.794677_g30577_i0forward_frame_1 - 0.58 10.2 6.1 4 7.5 0.6 2.2 1 1 1 2 2 2 0 ARS binding protein 2 Ntox37 PF15535.6 NODE_37856_length_561_cov_73.136882_g30576_i0reverse_frame_1 - 0.12 12.8 0.6 0.2 12.1 0.2 1.6 2 0 0 2 2 2 0 Bacterial toxin 37 AAA_8 PF12780.7 NODE_37837_length_561_cov_169.524715_g30558_i0reverse_frame_1 - 5e-51 173.5 0.0 6.3e-51 173.2 0.0 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 TNFR_c6 PF00020.18 NODE_37829_length_561_cov_219.125475_g30550_i0reverse_frame_1 - 0.47 10.9 5.8 2.1 8.8 0.1 2.7 3 0 0 3 3 3 0 TNFR/NGFR cysteine-rich region UvrC_HhH_N PF08459.11 NODE_37813_length_562_cov_2.166983_g30534_i0reverse_frame_3 - 1.3e-46 158.3 0.0 1.5e-46 158.1 0.0 1.0 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal Ntox30 PF15532.6 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_3 - 0.048 14.0 0.0 0.1 13.0 0.0 1.5 2 0 0 2 2 2 0 Bacterial toxin 30 HemY_N PF07219.13 NODE_37806_length_562_cov_3.872865_g30527_i0forward_frame_2 - 0.39 10.9 2.0 0.64 10.2 2.0 1.3 1 0 0 1 1 1 0 HemY protein N-terminus ERGIC_N PF13850.6 NODE_37802_length_562_cov_68.254269_g30523_i0forward_frame_3 - 2.7 8.4 8.0 0.48 10.8 3.4 2.1 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ins134_P3_kin PF05770.11 NODE_37800_length_562_cov_77.459203_g30521_i0reverse_frame_3 - 0.11 12.0 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain Fusion_gly PF00523.18 NODE_37800_length_562_cov_77.459203_g30521_i0forward_frame_2 - 0.15 10.3 3.1 0.19 10.0 3.1 1.1 1 0 0 1 1 1 0 Fusion glycoprotein F0 3HBOH PF10605.9 NODE_37787_length_562_cov_118.946869_g30508_i0forward_frame_3 - 0.19 9.9 1.5 0.22 9.7 1.5 1.0 1 0 0 1 1 1 0 3HB-oligomer hydrolase (3HBOH) Rdx PF10262.9 NODE_37765_length_562_cov_13264.702087_g21013_i9forward_frame_3 - 4.2e-07 30.1 0.0 7.9e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 Rdx family Rad21_Rec8 PF04824.16 NODE_37763_length_563_cov_2.469697_g30486_i0reverse_frame_3 - 0.058 12.7 0.0 0.092 12.1 0.0 1.3 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein Helicase_Sgs1 PF11408.8 NODE_37761_length_563_cov_3.077652_g30484_i0reverse_frame_2 - 0.11 12.5 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Sgs1 RecQ helicase Gly_kinase PF02595.15 NODE_37761_length_563_cov_3.077652_g30484_i0forward_frame_2 - 8.4e-69 232.3 3.7 9.3e-69 232.2 3.7 1.0 1 0 0 1 1 1 1 Glycerate kinase family UPF0242 PF06785.11 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.00077 19.6 12.5 0.00077 19.6 12.5 2.0 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus PspA_IM30 PF04012.12 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.0019 17.8 8.7 0.0026 17.4 8.6 1.3 1 1 0 1 1 1 1 PspA/IM30 family ATG16 PF08614.11 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.0033 17.7 6.4 0.0033 17.7 6.4 2.7 1 1 1 2 2 2 1 Autophagy protein 16 (ATG16) HGD-D PF06050.13 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.0053 16.6 0.6 0.0061 16.4 0.6 1.1 1 0 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component SlyX PF04102.12 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.0076 16.9 11.9 2.9 8.6 0.0 4.1 3 2 0 3 3 3 0 SlyX Spectrin PF00435.21 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.014 15.8 15.7 0.77 10.3 0.5 2.3 1 1 1 2 2 2 0 Spectrin repeat AAA_13 PF13166.6 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.024 13.3 17.6 0.034 12.8 17.6 1.2 1 0 0 1 1 1 0 AAA domain Atg14 PF10186.9 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.024 13.7 17.4 0.037 13.1 14.9 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 HrpB7 PF09486.10 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.028 14.8 2.5 0.052 13.9 0.3 2.3 1 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) XhlA PF10779.9 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.028 14.6 20.9 0.03 14.5 5.8 3.9 2 1 2 4 4 4 0 Haemolysin XhlA Filament PF00038.21 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.029 14.0 14.9 0.16 11.5 10.4 2.6 1 1 2 3 3 3 0 Intermediate filament protein Tropomyosin_1 PF12718.7 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.03 14.5 23.8 0.36 11.0 16.4 2.4 1 1 1 2 2 2 0 Tropomyosin like DUF4407 PF14362.6 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.039 13.3 8.5 0.047 13.0 8.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Peroxin-13_N PF04088.13 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.049 13.9 2.3 0.094 13.0 2.3 1.5 1 0 0 1 1 1 0 Peroxin 13, N-terminal region BLOC1_2 PF10046.9 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.05 13.9 18.4 0.12 12.7 1.6 3.2 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Laminin_II PF06009.12 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.078 13.0 13.3 0.047 13.7 7.1 2.3 1 1 1 2 2 2 0 Laminin Domain II NPV_P10 PF05531.12 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.083 13.4 15.0 0.068 13.6 7.7 3.4 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein V_ATPase_I PF01496.19 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.086 10.8 5.8 0.098 10.6 5.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3450 PF11932.8 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.094 12.0 14.0 0.14 11.4 7.2 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF848 PF05852.11 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.11 12.6 12.5 0.046 13.8 9.1 2.0 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) USP8_interact PF08941.10 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.16 11.8 6.5 0.33 10.7 6.0 2.0 1 1 0 1 1 1 0 USP8 interacting CALCOCO1 PF07888.11 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.16 10.8 14.5 0.28 10.0 14.5 1.4 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Fez1 PF06818.15 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.17 12.3 15.6 0.1 13.1 13.0 1.7 1 1 1 2 2 2 0 Fez1 DUF745 PF05335.13 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.18 11.5 9.9 0.24 11.1 6.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF745) ABC_tran_CTD PF16326.5 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.19 12.0 9.7 0.53 10.6 0.1 3.4 2 2 2 4 4 3 0 ABC transporter C-terminal domain Lebercilin PF15619.6 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.25 11.0 20.0 3.3 7.3 19.8 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease MAD PF05557.13 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.25 9.7 19.5 0.68 8.2 1.9 1.7 1 1 0 1 1 1 0 Mitotic checkpoint protein Exonuc_VII_L PF02601.15 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.35 10.4 12.2 0.56 9.7 12.2 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit DHR10 PF18595.1 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.39 10.8 20.6 1.4 9.0 9.3 3.0 2 1 1 3 3 3 0 Designed helical repeat protein 10 domain MbeD_MobD PF04899.12 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.4 10.8 5.9 0.53 10.4 1.1 2.6 2 1 0 2 2 2 0 MbeD/MobD like CP12 PF02672.15 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.41 11.4 8.4 0.68 10.7 1.0 3.1 2 1 1 3 3 3 0 CP12 domain Spc7 PF08317.11 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.44 9.4 20.1 0.12 11.3 14.1 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein SpoIISA_toxin PF14171.6 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.46 10.2 4.7 3.4 7.3 4.7 2.2 1 1 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system DUF3552 PF12072.8 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.53 9.7 15.7 0.31 10.4 13.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF2203 PF09969.9 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.63 10.8 9.0 7 7.4 6.8 2.6 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF16 PF01519.16 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.71 10.4 21.4 5.4 7.6 13.8 3.2 2 1 1 3 3 3 0 Protein of unknown function DUF16 DivIC PF04977.15 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.73 9.7 15.7 0.22 11.3 6.7 3.1 2 2 0 3 3 3 0 Septum formation initiator DUF4200 PF13863.6 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.81 10.1 19.0 1 9.8 14.4 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Fib_alpha PF08702.10 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.82 9.8 20.2 3 8.0 2.6 2.8 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Med4 PF10018.9 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.9 9.2 11.3 7.3 6.2 7.0 2.3 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 ADIP PF11559.8 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.91 9.6 19.4 0.53 10.4 3.0 3.1 1 1 3 4 4 4 0 Afadin- and alpha -actinin-Binding DUF948 PF06103.11 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 0.95 9.8 9.4 13 6.2 9.4 2.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Csm1_N PF18504.1 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 1.1 9.7 17.8 0.27 11.6 6.2 3.7 3 2 2 5 5 3 0 Csm1 N-terminal domain TMF_DNA_bd PF12329.8 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 1.3 9.1 24.3 1.6 8.8 3.9 3.9 1 1 3 4 4 4 0 TATA element modulatory factor 1 DNA binding Striatin PF08232.12 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 1.4 9.5 10.6 5.3 7.6 9.9 2.2 1 1 0 1 1 1 0 Striatin family Phage_tail_NK PF16532.5 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 1.4 8.5 5.3 1.1 8.8 0.2 2.8 2 1 1 3 3 3 0 Sf6-type phage tail needle knob or tip of some Caudovirales HSP70 PF00012.20 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 1.4 7.0 12.0 0.086 11.0 7.1 1.4 2 0 0 2 2 2 0 Hsp70 protein TMPIT PF07851.13 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 1.7 7.8 13.8 9 5.4 13.2 2.1 1 1 0 1 1 1 0 TMPIT-like protein HemX PF04375.14 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 2.2 7.5 17.3 0.1 11.9 4.8 2.8 1 1 2 3 3 3 0 HemX, putative uroporphyrinogen-III C-methyltransferase BST2 PF16716.5 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 2.4 8.8 21.3 0.12 13.0 9.1 3.0 2 1 1 3 3 3 0 Bone marrow stromal antigen 2 APG6_N PF17675.1 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 2.5 8.6 18.7 0.2 12.2 9.9 2.1 2 0 0 2 2 2 0 Apg6 coiled-coil region Seryl_tRNA_N PF02403.22 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 3.3 8.0 21.7 9.2 6.5 10.7 3.1 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain KxDL PF10241.9 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 3.9 7.8 16.7 1.5 9.1 4.1 3.3 2 2 1 3 3 3 0 Uncharacterized conserved protein SseC PF04888.12 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 4.8 6.7 10.2 0.79 9.3 5.5 1.9 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family KLRAQ PF10205.9 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 5.5 7.3 18.1 0.78 10.0 12.8 2.1 2 1 0 2 2 2 0 Predicted coiled-coil domain-containing protein DUF724 PF05266.14 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 5.9 6.7 17.7 1.4 8.7 13.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF4988 PF16378.5 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 6.9 6.3 15.5 5.1 6.7 4.3 3.7 2 1 1 3 3 3 0 Domain of unknown function LMBR1 PF04791.16 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 6.9 5.4 12.7 8.8 5.1 11.9 1.3 1 1 0 1 1 1 0 LMBR1-like membrane protein DUF5320 PF17253.2 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 7.4 7.7 8.5 1.9 9.6 0.9 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5320) Noelin-1 PF12308.8 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 7.8 6.5 10.8 0.63 10.1 4.7 2.2 2 1 1 3 3 2 0 Neurogenesis glycoprotein YtxH PF12732.7 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 8.3 7.0 6.9 1.1e+02 3.4 6.9 2.7 1 1 0 1 1 1 0 YtxH-like protein Jnk-SapK_ap_N PF09744.9 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 8.8 6.5 18.9 1.3 9.2 8.9 2.7 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 Phage_GPO PF05929.11 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 9.4 5.8 13.7 2.8 7.5 10.1 1.8 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase BRE1 PF08647.11 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 9.8 6.3 22.0 1.6 8.9 15.2 2.3 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase LPP PF04728.13 NODE_37758_length_563_cov_3.439394_g30481_i0reverse_frame_3 - 9.9 6.6 13.2 3.1 8.3 4.6 3.8 3 2 0 3 3 3 0 Lipoprotein leucine-zipper RNA_bind PF08675.11 NODE_37757_length_563_cov_3.556818_g30480_i0reverse_frame_3 - 0.012 15.7 0.1 0.037 14.1 0.0 1.8 2 0 0 2 2 2 0 RNA binding domain UQ_con PF00179.26 NODE_37753_length_563_cov_72.206439_g30476_i0forward_frame_2 - 1.9e-21 76.2 0.2 2.3e-21 75.9 0.2 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Aldo_ket_red PF00248.21 NODE_37744_length_563_cov_92.751894_g30468_i0forward_frame_3 - 3.1e-25 89.0 0.0 5e-25 88.3 0.0 1.3 1 0 0 1 1 1 1 Aldo/keto reductase family Chal_sti_synt_N PF00195.19 NODE_37715_length_564_cov_1.986767_g30440_i0forward_frame_2 - 0.16 11.4 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain POTRA PF07244.15 NODE_37709_length_564_cov_3.359168_g30434_i0forward_frame_2 - 0.026 15.1 0.2 3.4 8.3 0.0 2.3 2 0 0 2 2 2 0 Surface antigen variable number repeat Calc_CGRP_IAPP PF00214.19 NODE_37705_length_564_cov_4.319471_g30430_i0forward_frame_3 - 0.11 12.9 0.3 0.15 12.4 0.3 1.2 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family PLA2_inh PF02988.15 NODE_37703_length_564_cov_4.899811_g30429_i0forward_frame_2 - 0.97 10.1 7.1 0.34 11.6 3.3 2.1 1 1 1 2 2 2 0 Phospholipase A2 inhibitor TTL PF03133.15 NODE_37693_length_564_cov_77.071834_g30420_i0forward_frame_2 - 5.7e-43 147.1 0.8 6.8e-43 146.9 0.8 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_37693_length_564_cov_77.071834_g30420_i0forward_frame_2 - 0.0074 15.6 0.4 0.098 11.9 0.1 2.4 2 1 0 2 2 2 1 YheC/D like ATP-grasp ATP-grasp_3 PF02655.14 NODE_37693_length_564_cov_77.071834_g30420_i0forward_frame_2 - 0.019 15.0 0.3 0.044 13.8 0.0 1.6 2 1 0 2 2 2 0 ATP-grasp domain DUF4241 PF14025.6 NODE_37693_length_564_cov_77.071834_g30420_i0forward_frame_2 - 0.11 12.7 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4241) Dus PF01207.17 NODE_37686_length_564_cov_98.497164_g30413_i0forward_frame_3 - 1.8e-22 79.9 0.0 2.1e-22 79.6 0.0 1.1 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 NODE_37686_length_564_cov_98.497164_g30413_i0forward_frame_3 - 0.17 11.3 0.0 0.26 10.7 0.0 1.2 1 0 0 1 1 1 0 Histidine biosynthesis protein Spc7 PF08317.11 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 7.1e-06 25.1 17.7 9e-06 24.8 17.7 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein CENP-F_leu_zip PF10473.9 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.0046 17.0 1.7 0.0046 17.0 1.7 2.2 2 0 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 KELK PF15796.5 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.012 16.0 11.0 0.012 16.0 11.0 2.2 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase MAP7 PF05672.11 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.014 15.1 21.3 0.019 14.7 21.3 1.1 1 0 0 1 1 1 0 MAP7 (E-MAP-115) family ABC_tran_CTD PF16326.5 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.022 15.0 10.8 0.022 15.0 10.8 2.3 1 1 1 2 2 2 0 ABC transporter C-terminal domain GAS PF13851.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.097 12.0 16.2 0.16 11.3 16.2 1.4 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding SOAR PF16533.5 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.39 10.7 10.3 0.038 14.0 3.5 2.2 1 1 1 2 2 2 0 STIM1 Orai1-activating region DUF1664 PF07889.12 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.48 10.5 4.0 0.92 9.6 3.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) CorA PF01544.18 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.3 8.3 4.8 1.7 7.9 4.8 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Prominin PF05478.11 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.4 6.8 4.9 1.7 6.5 4.9 1.1 1 0 0 1 1 1 0 Prominin APG6_N PF17675.1 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.7 9.2 23.6 3.4 8.2 23.6 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.7 6.4 8.5 2 6.2 8.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF572 PF04502.13 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.8 8.1 12.9 2.2 7.8 12.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF572) Spore_III_AF PF09581.10 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 2 8.4 8.0 2.4 8.1 8.0 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Fmp27_WPPW PF10359.9 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 2 7.2 6.8 2.4 6.9 6.8 1.3 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF4201 PF13870.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 3.4 7.4 14.2 12 5.6 13.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) OmpH PF03938.14 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 3.4 8.0 23.1 0.83 10.0 14.1 2.1 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Cauli_AT PF03233.13 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 3.6 7.5 5.0 4.4 7.2 2.4 2.1 1 1 1 2 2 2 0 Aphid transmission protein DUF3584 PF12128.8 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 3.6 5.0 19.8 4.3 4.7 19.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) UPF0449 PF15136.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 4.4 7.8 10.9 2.5 8.6 1.7 3.0 1 1 2 3 3 3 0 Uncharacterised protein family UPF0449 AAA_13 PF13166.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 4.8 5.7 14.1 0.73 8.4 10.1 1.5 1 1 1 2 2 2 0 AAA domain ATG16 PF08614.11 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 5.4 7.2 27.6 9.2 6.4 24.7 2.3 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF4407 PF14362.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 5.9 6.2 18.1 7.9 5.7 18.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) XhlA PF10779.9 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 6.5 7.0 7.8 17 5.7 0.9 2.4 1 1 1 2 2 2 0 Haemolysin XhlA DUF724 PF05266.14 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 7.2 6.4 12.2 10 5.9 12.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) CDC37_N PF03234.14 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 9.7 7.1 10.2 0.64 10.9 3.3 2.0 1 1 1 2 2 2 0 Cdc37 N terminal kinase binding PsbU PF06514.11 ORF99569 - 4.5e-24 84.3 0.1 6.1e-24 83.8 0.1 1.2 1 0 0 1 1 1 1 Photosystem II 12 kDa extrinsic protein (PsbU) Melittin PF01372.17 ORF99569 - 0.017 15.0 0.0 0.05 13.6 0.0 1.8 2 0 0 2 2 2 0 Melittin HHH_3 PF12836.7 ORF99569 - 0.018 15.3 0.0 0.05 13.9 0.0 1.8 1 1 0 1 1 1 0 Helix-hairpin-helix motif SQS_PSY PF00494.19 ORF97842 - 0.012 15.1 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 0 Squalene/phytoene synthase FSAP_sig_propep PF03032.15 ORF97842 - 0.091 12.8 0.1 0.091 12.8 0.1 1.9 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide Ogr_Delta PF04606.12 ORF97842 - 0.16 12.0 0.7 0.27 11.3 0.7 1.3 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger zf-C3HC4_3 PF13920.6 ORF97603 - 5.9e-13 48.5 7.4 9e-13 47.9 7.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF97603 - 9.4e-06 25.9 7.6 1.7e-05 25.0 7.6 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF97603 - 5.2e-05 23.0 8.0 8.6e-05 22.3 8.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF97603 - 0.0077 16.2 7.8 0.016 15.2 7.8 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Pal1 PF08316.11 ORF97603 - 0.14 12.9 0.0 0.2 12.4 0.0 1.2 1 0 0 1 1 1 0 Pal1 cell morphology protein Endonuclease_7 PF02945.15 ORF97603 - 0.21 11.6 6.1 0.96 9.4 6.1 2.1 1 1 0 1 1 1 0 Recombination endonuclease VII Prok-RING_4 PF14447.6 ORF97603 - 0.61 10.0 10.3 1.2 9.0 10.3 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF97603 - 0.71 9.8 9.5 1.5 8.7 9.5 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-P11 PF03854.14 ORF97603 - 1.4 8.7 5.6 17 5.1 5.8 2.1 1 1 1 2 2 2 0 P-11 zinc finger GAGA PF09237.11 ORF97603 - 2.8 7.8 7.9 4.2 7.2 1.4 3.2 3 0 0 3 3 3 0 GAGA factor C1_1 PF00130.22 ORF97603 - 5.8 6.9 9.5 1.5 8.8 5.9 1.9 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) GSG-1 PF07803.11 ORF97469 - 0.099 12.6 0.0 2.2 8.2 0.0 2.3 2 1 1 3 3 3 0 GSG1-like protein ACPS PF01648.20 ORF97469 - 0.18 11.9 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 4'-phosphopantetheinyl transferase superfamily MORN PF02493.20 ORF96903 - 0.00031 20.4 0.9 0.44 10.5 0.1 2.6 2 0 0 2 2 2 2 MORN repeat PRONE PF03759.13 ORF96903 - 0.07 11.9 0.1 0.082 11.7 0.1 1.2 1 0 0 1 1 1 0 PRONE (Plant-specific Rop nucleotide exchanger) Thioredoxin PF00085.20 ORF95215 - 8.6e-09 35.3 0.3 2e-08 34.2 0.1 1.6 2 0 0 2 2 2 1 Thioredoxin OST3_OST6 PF04756.13 ORF95215 - 0.0084 15.5 0.0 0.01 15.2 0.0 1.2 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Phosducin PF02114.16 ORF95215 - 0.012 14.6 0.0 0.023 13.7 0.0 1.4 1 0 0 1 1 1 0 Phosducin Mnd1 PF03962.15 ORF95215 - 0.062 13.6 0.2 0.13 12.6 0.2 1.6 1 0 0 1 1 1 0 Mnd1 HTH domain SHIPPO-rpt PF07004.12 ORF91672 - 3.7e-18 65.5 25.3 0.00011 22.9 2.0 5.3 5 0 0 5 5 5 5 Sperm-tail PG-rich repeat DUF2115 PF09888.9 ORF90506 - 0.026 15.1 0.1 0.044 14.3 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) RsbU_N PF08673.10 ORF90506 - 0.039 14.0 0.0 0.1 12.7 0.0 1.7 1 0 0 1 1 1 0 Phosphoserine phosphatase RsbU, N-terminal domain Nucleolin_bd PF16725.5 ORF90506 - 0.084 12.5 0.0 0.18 11.5 0.0 1.5 1 0 0 1 1 1 0 Nucleolin binding domain PhoLip_ATPase_C PF16212.5 ORF88178 - 1e-44 153.2 0.5 1.2e-44 153.0 0.5 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Phage_holin_3_5 PF16085.5 ORF88177 - 0.45 10.7 2.1 0.32 11.1 0.2 1.7 2 0 0 2 2 2 0 Bacteriophage holin Hol, superfamily III WWE PF02825.20 ORF85976 - 7.6e-17 61.7 0.3 4e-13 49.8 1.0 2.2 2 0 0 2 2 2 2 WWE domain DUF2115 PF09888.9 ORF85096 - 0.033 14.7 0.2 0.061 13.8 0.2 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) RsbU_N PF08673.10 ORF85096 - 0.033 14.3 0.2 0.1 12.7 0.0 1.9 2 0 0 2 2 2 0 Phosphoserine phosphatase RsbU, N-terminal domain Nucleolin_bd PF16725.5 ORF85096 - 0.082 12.6 0.0 0.18 11.5 0.0 1.5 1 0 0 1 1 1 0 Nucleolin binding domain Actin PF00022.19 ORF8422 - 7.2e-61 206.0 0.0 8e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 Actin Pkinase PF00069.25 ORF81355 - 2.8e-50 171.2 0.1 3.1e-50 171.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF81355 - 2.6e-27 95.8 0.0 3.1e-27 95.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF81355 - 2.8e-11 43.3 0.0 3.3e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF81355 - 2.3e-07 30.0 0.0 3e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase DPPIV_rep PF18811.1 ORF81355 - 0.17 11.9 0.7 0.4 10.7 0.0 2.1 2 0 0 2 2 2 0 Dipeptidyl peptidase IV (DPP IV) low complexity region Actin PF00022.19 ORF79367 - 7.2e-61 206.0 0.0 8e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 Actin TPR_16 PF13432.6 ORF78334 - 9.6e-05 22.9 2.4 0.043 14.5 0.2 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF78334 - 0.0032 17.9 0.5 0.015 15.8 0.1 2.4 2 2 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF78334 - 0.0076 16.3 0.3 0.32 11.2 0.1 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF78334 - 0.038 14.6 1.2 0.17 12.6 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF78334 - 0.043 14.6 1.5 3 8.9 0.1 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF78334 - 0.14 12.5 2.8 0.55 10.6 0.2 2.4 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF78334 - 0.14 12.0 0.0 0.54 10.2 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat NA37 PF04245.13 ORF78334 - 0.15 11.5 0.0 13 5.1 0.0 2.1 1 1 1 2 2 2 0 37-kD nucleoid-associated bacterial protein TPR_4 PF07721.14 ORF78334 - 2 9.3 5.4 0.73 10.6 0.8 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat GD_AH_C PF04295.13 ORF7828 - 4.2e-72 243.1 0.0 4.6e-72 243.0 0.0 1.0 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus FAM76 PF16046.5 ORF76325 - 0.79 9.0 7.5 1 8.7 7.5 1.1 1 0 0 1 1 1 0 FAM76 protein DUF1631 PF07793.11 ORF76325 - 3.1 6.1 14.4 3.8 5.8 14.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) ERGIC_N PF13850.6 ORF76243 - 0.025 14.9 1.2 0.044 14.1 0.2 1.9 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4064 PF13273.6 ORF76243 - 0.036 14.4 1.1 0.058 13.7 1.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) HoxA13_N PF12284.8 ORF76243 - 0.052 14.2 0.0 0.08 13.6 0.0 1.3 1 0 0 1 1 1 0 Hox protein A13 N terminal Acetyltransf_1 PF00583.25 ORF72289 - 7.9e-17 61.6 0.0 9.9e-17 61.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF72289 - 6.6e-10 39.0 0.0 9.6e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF72289 - 1.1e-09 38.5 0.0 1.5e-09 38.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF72289 - 5e-05 23.5 0.0 6.2e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF72289 - 5.7e-05 23.0 0.0 7.7e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.6 ORF72289 - 0.0026 17.5 0.0 0.0033 17.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF72289 - 0.003 17.6 0.0 0.0049 17.0 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF72289 - 0.0041 17.2 0.0 0.0053 16.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF72289 - 0.013 16.1 0.0 0.016 15.9 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AhpC-TSA PF00578.21 ORF68775 - 4.4e-33 113.8 0.1 5.5e-33 113.5 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF68775 - 3.6e-12 46.2 0.0 4.5e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF68775 - 1.1e-06 28.4 0.1 1.9e-06 27.6 0.1 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF68775 - 0.00012 21.9 0.0 0.00082 19.3 0.0 2.1 2 0 0 2 2 2 1 SCO1/SenC JmjC PF02373.22 ORF68449 - 8e-16 58.5 1.5 8.6e-16 58.4 0.2 1.7 2 1 0 2 2 2 1 JmjC domain, hydroxylase Cupin_8 PF13621.6 ORF68449 - 2.2e-07 30.9 0.1 4.2e-07 29.9 0.1 1.4 1 0 0 1 1 1 1 Cupin-like domain GPI PF06560.11 ORF68449 - 0.067 12.5 0.1 0.16 11.2 0.0 1.7 1 1 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.11 ORF68449 - 0.2 11.4 0.0 0.44 10.3 0.0 1.5 1 0 0 1 1 1 0 Cupin domain TPR_1 PF00515.28 ORF68449 - 6.1 6.8 7.0 23 5.0 0.2 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat Rhodanese_C PF12368.8 ORF68296 - 9.8e-13 48.3 5.9 2.1e-12 47.3 5.8 1.6 1 1 0 1 1 1 1 Rhodanase C-terminal Thioredoxin PF00085.20 ORF65738 - 3.9e-17 62.1 0.1 6.4e-17 61.4 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF65738 - 2.1e-05 24.8 0.6 0.00018 21.7 0.1 2.4 2 1 1 3 3 3 1 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF65738 - 0.0001 22.7 0.1 0.00057 20.3 0.1 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF65738 - 0.00018 21.7 0.2 0.0003 20.9 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF65738 - 0.00043 19.7 0.0 0.00066 19.1 0.0 1.3 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 ORF65738 - 0.0083 16.0 0.1 0.012 15.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family DUF836 PF05768.14 ORF65738 - 0.0091 16.4 0.1 0.019 15.4 0.1 1.5 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Glutaredoxin PF00462.24 ORF65738 - 0.16 12.2 0.1 0.45 10.8 0.0 1.8 2 0 0 2 2 2 0 Glutaredoxin Thioredoxin PF00085.20 ORF64939 - 3.9e-17 62.1 0.1 6.4e-17 61.4 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF64939 - 2.1e-05 24.8 0.6 0.00018 21.7 0.1 2.4 2 1 1 3 3 3 1 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF64939 - 0.0001 22.7 0.1 0.00057 20.3 0.1 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF64939 - 0.00018 21.6 0.2 0.0003 20.9 0.2 1.3 1 0 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF64939 - 0.00047 19.6 0.0 0.00073 19.0 0.0 1.3 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 ORF64939 - 0.0083 16.0 0.1 0.012 15.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family DUF836 PF05768.14 ORF64939 - 0.0094 16.3 0.1 0.02 15.3 0.1 1.5 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Glutaredoxin PF00462.24 ORF64939 - 0.17 12.1 0.1 0.45 10.8 0.0 1.7 2 0 0 2 2 2 0 Glutaredoxin Helicase_C PF00271.31 ORF64145 - 2.7e-05 24.5 0.0 3.8e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ABC2_membrane PF01061.24 ORF6277 - 1.7e-32 112.6 17.4 2.3e-32 112.1 17.4 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF6277 - 7.1e-26 91.1 18.8 7.8e-26 91.0 18.8 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 ORF6277 - 3.2e-19 69.3 13.2 3.4e-19 69.2 13.2 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 ORF6277 - 0.00013 22.0 11.4 0.00023 21.2 10.2 2.0 1 1 0 1 1 1 1 ABC-2 family transporter protein DUF2374 PF09574.10 ORF6277 - 0.38 10.6 7.2 3.8 7.4 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (Duf2374) Sec1 PF00995.23 ORF62743 - 1.8e-28 100.2 1.4 2e-28 100.0 1.4 1.0 1 0 0 1 1 1 1 Sec1 family PP2C PF00481.21 ORF6245 - 2.2e-06 27.5 0.0 3.5e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Protein phosphatase 2C Ribosomal_L18 PF17135.4 ORF60042 - 2.1e-90 301.2 1.1 2.2e-90 301.1 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 ORF60042 - 0.0054 17.4 1.3 0.013 16.2 0.0 2.3 2 1 0 2 2 2 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Fungus-induced PF10917.8 ORF58461 - 3.8 7.9 7.4 4.1 7.8 0.5 2.3 2 0 0 2 2 2 0 Fungus-induced protein ODC_AZ PF02100.17 ORF57932 - 0.0053 16.7 0.2 0.0081 16.1 0.2 1.3 1 0 0 1 1 1 1 Ornithine decarboxylase antizyme LCE6A PF15858.5 ORF56833 - 0.094 13.5 0.4 0.094 13.5 0.4 2.6 2 1 1 3 3 3 0 Late cornified envelope protein 6A family DUF4205 PF13898.6 ORF55254 - 3.9e-54 183.9 0.0 4.3e-54 183.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4205) DUF2239 PF09998.9 ORF54964 - 0.011 15.6 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) hNIFK_binding PF12196.8 ORF54964 - 0.09 12.3 1.3 0.16 11.5 1.3 1.4 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK MFS_1 PF07690.16 ORF53649 - 1.1e-08 34.4 0.2 1.1e-08 34.4 0.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF53649 - 0.036 12.4 0.2 0.047 12.0 0.2 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Ephrin_rec_like PF07699.13 ORF53016 - 0.039 13.7 0.2 0.069 12.9 0.2 1.4 1 0 0 1 1 1 0 Putative ephrin-receptor like PQQ_2 PF13360.6 ORF52582 - 0.043 13.4 0.0 0.066 12.8 0.0 1.3 1 1 0 1 1 1 0 PQQ-like domain DUF1631 PF07793.11 ORF52582 - 0.12 10.8 0.0 0.16 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks110.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks110.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks110.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks110.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Abhydro_lipase PF04083.16 ORF48732 - 1.7e-16 59.5 0.0 2.9e-16 58.8 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF48732 - 9.5e-07 28.7 0.1 1.3e-06 28.3 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF48732 - 0.13 11.5 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 zf-C2H2 PF00096.26 ORF46973 - 6.1e-11 42.1 9.4 6e-07 29.6 2.6 2.8 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF46973 - 5.7e-08 32.9 9.5 3.8e-05 24.2 1.1 3.0 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF46973 - 1.7e-07 31.4 7.8 3.1e-05 24.2 0.3 3.6 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF46973 - 0.0025 17.5 2.7 0.0025 17.5 2.7 3.0 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-Di19 PF05605.12 ORF46973 - 0.0047 17.2 2.0 0.01 16.1 0.2 2.1 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2HC_2 PF13913.6 ORF46973 - 0.0069 16.3 1.1 0.91 9.5 0.4 2.5 2 0 0 2 2 2 1 zinc-finger of a C2HC-type zf-C2H2_6 PF13912.6 ORF46973 - 0.02 14.9 0.3 0.02 14.9 0.3 3.0 3 0 0 3 3 3 0 C2H2-type zinc finger YdjO PF14169.6 ORF46973 - 0.74 9.6 4.4 6.8 6.5 4.1 2.5 1 1 0 1 1 1 0 Cold-inducible protein YdjO zf-BED PF02892.15 ORF46973 - 1.3 9.1 7.5 0.33 11.0 1.7 2.4 1 1 1 2 2 2 0 BED zinc finger zf-RING_2 PF13639.6 ORF46593 - 1.4e-13 51.0 7.6 2e-13 50.4 7.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF46593 - 1.8e-10 40.3 2.8 3.6e-10 39.4 2.8 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF46593 - 1.3e-09 37.7 6.7 2e-09 37.1 6.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF46593 - 5.6e-09 35.7 5.6 8.2e-09 35.2 5.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF46593 - 7.3e-08 32.6 7.9 1.6e-07 31.5 7.9 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF46593 - 1.2e-05 25.1 6.6 1.8e-05 24.6 6.6 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF46593 - 4.3e-05 23.3 5.9 6.8e-05 22.7 5.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF46593 - 0.00015 21.8 2.5 0.0003 20.8 2.5 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF46593 - 0.00022 21.2 3.5 0.00039 20.4 3.5 1.4 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF46593 - 0.00078 19.2 6.7 0.0012 18.7 6.7 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF46593 - 0.012 15.4 6.5 0.019 14.7 6.5 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn_ribbon_17 PF17120.5 ORF46593 - 0.025 14.2 6.0 0.049 13.3 6.0 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING-like PF08746.11 ORF46593 - 0.06 13.7 9.3 0.11 12.9 9.3 1.5 1 1 0 1 1 1 0 RING-like domain SAP PF02037.27 ORF46593 - 0.076 12.8 0.9 0.97 9.3 0.2 2.7 2 0 0 2 2 2 0 SAP domain zf-C3HC4_4 PF15227.6 ORF46593 - 0.12 12.6 6.6 0.36 11.0 6.7 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C2H2_6 PF13912.6 ORF46593 - 0.14 12.2 2.9 1.5 8.9 0.1 3.2 4 0 0 4 4 4 0 C2H2-type zinc finger RINGv PF12906.7 ORF46593 - 0.19 11.9 6.0 0.48 10.6 6.0 1.7 1 1 0 1 1 1 0 RING-variant domain FANCL_C PF11793.8 ORF46593 - 0.4 10.9 8.3 2.8 8.2 8.3 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain PHD PF00628.29 ORF46593 - 0.54 10.2 7.5 0.84 9.6 7.5 1.3 1 0 0 1 1 1 0 PHD-finger Ras PF00071.22 ORF45321 - 1.4e-42 145.0 1.0 1.7e-42 144.8 1.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF45321 - 6.3e-20 71.6 0.1 1e-19 70.9 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF45321 - 6.7e-06 25.7 0.2 9.4e-06 25.2 0.2 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MFS_MOT1 PF16983.5 ORF45304 - 0.089 13.2 1.6 0.13 12.6 1.2 1.6 1 1 0 1 1 1 0 Molybdate transporter of MFS superfamily zf-C3HC4 PF00097.25 ORF45304 - 3.2 7.7 7.2 29 4.7 0.1 2.8 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF45304 - 3.6 7.8 6.9 22 5.3 3.1 2.6 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING SQS_PSY PF00494.19 ORF44538 - 0.012 15.1 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 0 Squalene/phytoene synthase Ogr_Delta PF04606.12 ORF44538 - 0.15 12.0 0.7 0.27 11.3 0.7 1.3 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger MORN PF02493.20 ORF4361 - 2.1e-40 134.2 40.7 5.2e-08 32.3 3.3 7.2 7 0 0 7 7 7 7 MORN repeat DUF3048_C PF17479.2 ORF4361 - 0.044 14.2 12.9 0.2 12.0 0.8 3.7 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain TFIIIC_sub6 PF10419.9 ORF4361 - 0.3 11.0 1.8 23 4.9 0.1 3.2 3 0 0 3 3 3 0 TFIIIC subunit triple barrel domain Tudor_2 PF18104.1 ORF4361 - 5.2 6.8 7.9 2.2 8.0 0.2 3.7 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain PKD_channel PF08016.12 ORF43013 - 1.5e-11 43.7 0.1 1.9e-11 43.3 0.1 1.1 1 0 0 1 1 1 1 Polycystin cation channel TRA-1_regulated PF02343.16 ORF43013 - 0.068 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 TRA-1 regulated protein R03H10.4 Atu4866 PF11512.8 ORF43013 - 0.091 13.2 0.1 0.2 12.1 0.1 1.5 1 0 0 1 1 1 0 Agrobacterium tumefaciens protein Atu4866 HMw1_D2 PF18254.1 ORF42398 - 0.031 14.6 0.0 0.053 13.9 0.0 1.4 1 0 0 1 1 1 0 HMW1 domain 2 HHH_6 PF14579.6 ORF42398 - 0.17 12.1 0.0 0.28 11.4 0.0 1.3 1 0 0 1 1 1 0 Helix-hairpin-helix motif MT PF12777.7 ORF39205 - 0.0011 18.0 0.1 0.0011 18.0 0.1 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Carbam_trans_N PF02543.15 ORF39205 - 0.026 14.2 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus adh_short PF00106.25 ORF37151 - 2.5e-21 76.0 0.0 3e-21 75.8 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF37151 - 9.8e-14 51.5 0.0 1.3e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF37151 - 0.071 13.0 0.2 0.18 11.7 0.2 1.7 1 1 0 1 1 1 0 KR domain NtA PF03146.15 ORF36047 - 0.036 13.9 0.0 0.12 12.2 0.0 1.8 2 0 0 2 2 2 0 Agrin NtA domain YtxH PF12732.7 ORF35805 - 0.063 13.8 1.0 3.2 8.3 1.0 2.4 1 1 0 1 1 1 0 YtxH-like protein Na_trans_assoc PF06512.13 ORF35805 - 2.8 8.2 9.7 3.5 7.9 9.7 1.2 1 0 0 1 1 1 0 Sodium ion transport-associated GLTSCR1 PF15249.6 ORF35805 - 5 7.6 10.8 19 5.7 0.1 2.9 1 1 1 2 2 2 0 Conserved region of unknown function on GLTSCR protein BPL_LplA_LipB PF03099.19 ORF35399 - 3.2e-13 49.7 0.0 4.5e-13 49.3 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.17 ORF35399 - 2.7e-12 46.4 0.1 5.4e-12 45.4 0.1 1.5 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain BPL_LplA_LipB_2 PF16917.5 ORF35399 - 0.006 16.1 0.1 0.0074 15.8 0.1 1.1 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family YdfA_immunity PF12127.8 ORF35399 - 0.024 13.7 0.1 0.033 13.3 0.1 1.1 1 0 0 1 1 1 0 SigmaW regulon antibacterial YcbB PF08664.10 ORF35363 - 0.084 12.9 0.1 0.31 11.1 0.0 1.9 2 0 0 2 2 2 0 YcbB domain MFS_MOT1 PF16983.5 ORF33938 - 0.089 13.2 1.6 0.13 12.6 1.2 1.6 1 1 0 1 1 1 0 Molybdate transporter of MFS superfamily zf-C3HC4 PF00097.25 ORF33938 - 3.2 7.7 7.2 29 4.7 0.1 2.8 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF33938 - 3.6 7.8 6.9 22 5.3 3.1 2.6 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING GATase PF00117.28 ORF33628 - 3.2e-57 193.4 0.0 3.5e-57 193.2 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF33628 - 9.9e-10 38.5 0.2 2.3e-09 37.3 0.2 1.5 1 1 0 1 1 1 1 Peptidase C26 RRM_2 PF04059.12 ORF33623 - 1.1e-20 73.7 0.0 1.4e-20 73.3 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF33623 - 0.00051 19.8 0.0 0.00084 19.1 0.0 1.5 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Actin PF00022.19 ORF33255 - 7.2e-61 206.0 0.0 8e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 Actin Popeye PF04831.13 ORF3284 - 3.9 7.7 9.0 1.3 9.1 4.4 2.1 1 1 1 2 2 2 0 Popeye protein conserved region SQS_PSY PF00494.19 ORF32510 - 0.012 15.1 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 0 Squalene/phytoene synthase Ogr_Delta PF04606.12 ORF32510 - 0.15 12.0 0.7 0.27 11.3 0.7 1.3 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger Phos_pyr_kin PF08543.12 ORF32011 - 7.6e-58 195.8 0.0 8.5e-58 195.6 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 ORF32011 - 8.9e-08 31.8 0.0 1.1e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase CUT PF02376.15 ORF32011 - 0.06 13.5 0.0 0.21 11.8 0.0 1.9 2 0 0 2 2 2 0 CUT domain Ribosomal_L18p PF00861.22 ORF32011 - 0.14 12.6 0.1 0.41 11.0 0.0 1.7 2 0 0 2 2 2 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast zf-RING_2 PF13639.6 ORF30830 - 3.8e-09 36.7 9.7 1.4e-08 34.9 5.9 2.3 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 ORF30830 - 6.3e-08 32.4 3.9 1.4e-07 31.3 3.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF30830 - 1.2e-07 31.6 5.4 3.3e-07 30.1 5.4 1.8 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF30830 - 1.3e-05 25.1 5.0 4.2e-05 23.5 0.6 2.5 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF30830 - 0.00011 22.2 2.3 0.00011 22.2 2.3 2.1 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF30830 - 0.0002 21.1 6.1 0.00041 20.2 5.7 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF30830 - 0.0024 17.7 5.9 0.0024 17.7 5.9 2.5 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 ORF30830 - 0.0028 17.4 4.5 0.0028 17.4 4.5 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF30830 - 0.0043 16.9 7.7 0.058 13.3 7.8 2.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF30830 - 0.015 15.6 8.9 0.1 12.9 8.9 2.2 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf_CCCH_4 PF18345.1 ORF30830 - 0.02 14.9 3.8 0.02 14.9 3.8 2.3 2 0 0 2 2 2 0 Zinc finger domain Torus PF16131.5 ORF30830 - 0.04 14.6 0.1 0.081 13.6 0.1 1.5 1 0 0 1 1 1 0 Torus domain zf-RING_4 PF14570.6 ORF30830 - 0.059 13.2 5.9 0.19 11.6 5.9 1.8 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-CCCH PF00642.24 ORF30830 - 0.11 12.4 3.9 0.34 10.9 3.9 1.9 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-ANAPC11 PF12861.7 ORF30830 - 0.12 12.4 5.5 0.079 13.0 3.1 2.0 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF30830 - 0.45 10.7 8.5 0.26 11.5 4.3 2.3 2 0 0 2 2 2 0 FANCL C-terminal domain zf-CCCH_4 PF18044.1 ORF30830 - 7.6 6.5 11.9 0.25 11.2 4.8 2.3 2 0 0 2 2 2 0 CCCH-type zinc finger Methyltransf_11 PF08241.12 ORF27796 - 4.2e-12 46.6 0.0 8.4e-12 45.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF27796 - 1.7e-10 41.5 0.3 8.6e-10 39.2 0.1 2.2 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF27796 - 4e-10 39.7 0.1 6e-10 39.1 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF27796 - 2.1e-06 27.2 0.1 2.7e-06 26.9 0.1 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF27796 - 0.00091 19.9 0.7 0.0015 19.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain NodS PF05401.11 ORF27796 - 0.0015 18.1 0.0 0.0022 17.6 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) Post_transc_reg PF13797.6 ORF27796 - 0.037 13.9 0.1 0.037 13.9 0.1 2.0 2 0 0 2 2 2 0 Post-transcriptional regulator ERGIC_N PF13850.6 ORF26343 - 0.031 14.6 1.1 0.044 14.1 0.2 1.8 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4064 PF13273.6 ORF26343 - 0.037 14.3 1.3 0.056 13.7 0.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) TMEM151 PF14857.6 ORF25662 - 1.9e-06 27.1 0.5 2.3e-06 26.8 0.5 1.0 1 0 0 1 1 1 1 TMEM151 family Nop53 PF07767.11 ORF25662 - 0.0024 17.3 0.0 0.0027 17.2 0.0 1.1 1 0 0 1 1 1 1 Nop53 (60S ribosomal biogenesis) TMEM151 PF14857.6 ORF25451 - 1.9e-06 27.1 0.5 2.3e-06 26.8 0.5 1.0 1 0 0 1 1 1 1 TMEM151 family Nop53 PF07767.11 ORF25451 - 0.0024 17.3 0.0 0.0027 17.2 0.0 1.1 1 0 0 1 1 1 1 Nop53 (60S ribosomal biogenesis) adh_short PF00106.25 ORF25408 - 4.1e-19 68.8 0.0 5.3e-19 68.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF25408 - 3.8e-09 36.4 0.0 4.8e-09 36.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF25408 - 3.2e-07 30.5 0.0 4.3e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 ORF25408 - 0.00057 19.2 0.0 0.00095 18.5 0.0 1.3 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Shikimate_DH PF01488.20 ORF25408 - 0.0043 17.1 0.1 0.006 16.6 0.1 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase DUF43 PF01861.16 ORF25408 - 0.0095 15.2 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 1 Branched-chain polyamine synthase A C-terminal domain NAD_binding_7 PF13241.6 ORF25408 - 0.018 15.5 0.0 0.022 15.2 0.0 1.2 1 0 0 1 1 1 0 Putative NAD(P)-binding ApbA PF02558.16 ORF25408 - 0.019 14.6 0.0 0.028 14.1 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Ubie_methyltran PF01209.18 ORF25408 - 0.02 14.2 0.0 0.071 12.4 0.0 1.8 1 1 1 2 2 2 0 ubiE/COQ5 methyltransferase family Pyr_redox_3 PF13738.6 ORF25408 - 0.053 12.8 0.0 0.065 12.5 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 ORF25408 - 0.057 14.0 0.1 0.082 13.5 0.1 1.3 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.6 ORF25408 - 0.097 12.6 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H-binding AlaDh_PNT_C PF01262.21 ORF25408 - 0.11 11.8 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain OAD_gamma PF04277.13 ORF25408 - 0.14 12.8 2.0 0.23 12.1 0.2 2.1 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain TrkA_N PF02254.18 ORF25408 - 0.14 12.4 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain Sacchrp_dh_NADP PF03435.18 ORF25408 - 0.19 12.0 0.0 0.26 11.5 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain zf-LITAF-like PF10601.9 ORF23743 - 0.1 12.9 3.6 0.13 12.5 3.6 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain MT PF12777.7 ORF21490 - 0.0011 18.0 0.1 0.0011 18.0 0.1 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Carbam_trans_N PF02543.15 ORF21490 - 0.026 14.2 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus Fe-S_biosyn PF01521.20 ORF20081 - 0.088 13.0 0.0 0.41 10.8 0.0 2.0 1 1 1 2 2 2 0 Iron-sulphur cluster biosynthesis Amidohydro_1 PF01979.20 ORF1939 - 6.5e-08 32.3 0.0 8.5e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Actin PF00022.19 ORF19367 - 6.7e-61 206.1 0.0 7.4e-61 206.0 0.0 1.0 1 0 0 1 1 1 1 Actin zf-C2H2 PF00096.26 ORF18843 - 1.1e-10 41.3 3.6 0.00023 21.4 0.1 2.8 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF18843 - 2.1e-06 27.9 7.8 0.0015 18.9 0.1 3.3 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF18843 - 5.4e-06 26.8 1.8 0.1 13.5 0.6 2.9 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF18843 - 0.045 13.5 1.7 0.75 9.6 0.1 2.5 2 0 0 2 2 2 0 zinc-finger C2H2-type Raptor_N PF14538.6 ORF18843 - 0.055 13.4 0.2 0.13 12.2 0.2 1.6 1 1 0 1 1 1 0 Raptor N-terminal CASPase like domain DUF192 PF02643.15 ORF17786 - 0.13 12.5 7.2 0.28 11.4 0.2 3.0 1 1 2 3 3 3 0 Uncharacterized ACR, COG1430 DUF2239 PF09998.9 ORF1592 - 0.011 15.6 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) hNIFK_binding PF12196.8 ORF1592 - 0.09 12.3 1.3 0.16 11.5 1.3 1.4 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK CUB PF00431.20 ORF15242 - 1e-13 51.6 0.0 1.4e-13 51.2 0.0 1.2 1 0 0 1 1 1 1 CUB domain Aldolase PF01081.19 ORF13879 - 5.3e-09 35.8 0.0 6.3e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 KDPG and KHG aldolase Thioredoxin_13 PF18401.1 ORF13879 - 0.039 13.9 0.0 0.057 13.3 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain RRM_1 PF00076.22 ORF13598 - 3.3e-15 55.7 0.0 5.6e-15 54.9 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF13598 - 0.00047 20.2 0.0 0.00075 19.6 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif PMI_typeI PF01238.21 ORF13590 - 5.2e-34 118.0 0.0 6e-34 117.8 0.0 1.0 1 0 0 1 1 1 1 Phosphomannose isomerase type I Cupin_2 PF07883.11 ORF13590 - 2.6e-05 23.8 0.1 0.0082 15.8 0.2 2.5 2 1 0 2 2 2 2 Cupin domain AraC_binding PF02311.19 ORF13590 - 0.0035 17.3 0.0 0.034 14.0 0.0 2.1 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_3 PF05899.12 ORF13590 - 0.077 12.7 0.0 0.2 11.4 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF861) SecY PF00344.20 ORF12205 - 2.3e-30 105.9 6.1 2.8e-30 105.6 6.1 1.0 1 0 0 1 1 1 1 SecY translocase YniB PF14002.6 ORF12205 - 1.7 8.4 5.8 0.093 12.5 0.6 1.5 2 0 0 2 2 2 0 YniB-like protein EF-hand_1 PF00036.32 ORF11617 - 0.00025 20.4 0.1 0.77 9.5 0.0 2.9 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF11617 - 0.0031 17.3 0.0 1.2 9.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF11617 - 0.012 16.0 0.0 0.21 12.1 0.0 2.5 2 2 0 2 2 2 0 EF-hand domain pair T_Ag_DNA_bind PF02217.16 ORF111532 - 0.11 13.2 0.3 13 6.5 0.1 2.2 2 0 0 2 2 2 0 Origin of replication binding protein DUF4820 PF16091.5 ORF109176 - 0.15 11.4 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) COX4_pro PF03626.14 ORF107830 - 0.03 14.7 2.0 0.03 14.7 2.0 2.5 2 1 0 2 2 2 0 Prokaryotic Cytochrome C oxidase subunit IV RCC1_2 PF13540.6 ORF107655 - 5.7e-12 45.1 10.6 0.0053 16.5 0.4 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF107655 - 0.11 12.4 1.0 8.8 6.3 0.0 3.0 1 1 3 4 4 4 0 Lipocalin / cytosolic fatty-acid binding protein family DUF4310 PF14187.6 ORF105171 - 0.0004 20.1 1.0 0.00054 19.7 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4310) DUF898 PF05987.13 ORF105171 - 0.052 12.6 1.6 0.34 9.9 2.2 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF898) Phage_holin_3_6 PF07332.11 ORF105171 - 1.7 8.7 15.9 1.8 8.6 0.4 2.1 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III ApbE PF02424.15 ORF10456 - 0.042 13.4 0.1 0.14 11.6 0.1 1.8 1 1 0 1 1 1 0 ApbE family Microtub_bd PF16796.5 ORF10456 - 0.046 13.7 0.2 0.1 12.5 0.2 1.7 1 1 0 1 1 1 0 Microtubule binding IL2 PF00715.17 ORF10456 - 0.065 13.2 0.1 0.1 12.6 0.1 1.4 1 0 0 1 1 1 0 Interleukin 2 Actin PF00022.19 ORF104057 - 7.2e-61 206.0 0.0 8e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 Actin eIF-1a PF01176.19 ORF103049 - 2.2e-18 65.8 0.0 5.1e-18 64.6 0.0 1.7 1 1 0 1 1 1 1 Translation initiation factor 1A / IF-1 RsgA_N PF16745.5 ORF103049 - 0.0022 17.7 0.0 0.0038 16.9 0.0 1.5 1 0 0 1 1 1 1 RsgA N-terminal domain DSPc PF00782.20 ORF101808 - 0.00022 21.0 0.2 0.00054 19.8 0.0 1.8 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain PRP8_domainIV PF12134.8 ORF101808 - 0.045 13.4 0.0 0.071 12.7 0.0 1.3 1 0 0 1 1 1 0 PRP8 domain IV core Autotransporter PF03797.19 ORF101048 - 7.3e-27 94.6 6.5 8.9e-27 94.3 6.5 1.1 1 0 0 1 1 1 1 Autotransporter beta-domain OMP_b-brl PF13505.6 ORF101048 - 1.3e-05 25.4 14.1 2e-05 24.8 14.1 1.3 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain Kelch_1 PF01344.25 ORF100787 - 1.1e-32 111.4 0.2 2e-11 43.3 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_6 PF13964.6 ORF100787 - 1.1e-14 54.0 3.7 0.0019 18.5 0.2 5.0 1 1 3 4 4 4 4 Kelch motif Kelch_2 PF07646.15 ORF100787 - 4.6e-11 42.2 0.1 0.13 12.3 0.0 4.3 4 0 0 4 4 4 4 Kelch motif Kelch_4 PF13418.6 ORF100787 - 1.5e-09 37.7 0.0 0.00029 20.8 0.0 3.4 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF100787 - 8.7e-08 32.0 0.1 0.35 10.9 0.0 4.1 4 0 0 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF100787 - 0.00011 22.3 7.1 0.064 13.6 0.1 4.2 4 1 0 4 4 4 2 Galactose oxidase, central domain Glyoxal_oxid_N PF07250.11 ORF100787 - 0.0072 15.5 0.0 0.014 14.6 0.0 1.4 1 1 1 2 2 2 1 Glyoxal oxidase N-terminus Crisp PF08562.10 ORF100156 - 0.086 13.4 0.4 0.17 12.5 0.4 1.4 1 0 0 1 1 1 0 Crisp HAD_2 PF13419.6 NODE_38099_length_556_cov_153.965451_g30803_i0reverse_frame_1 - 0.0062 16.6 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase CbtA_toxin PF06755.12 NODE_38099_length_556_cov_153.965451_g30803_i0reverse_frame_1 - 0.014 15.4 0.0 0.039 14.0 0.0 1.6 1 1 1 2 2 2 0 CbtA_toxin of type IV toxin-antitoxin system SpoIISA_toxin PF14171.6 NODE_38088_length_556_cov_252.796545_g30792_i0reverse_frame_1 - 0.0086 15.8 2.3 0.01 15.5 2.3 1.2 1 0 0 1 1 1 1 Toxin SpoIISA, type II toxin-antitoxin system PTB PF08416.13 NODE_38088_length_556_cov_252.796545_g30792_i0reverse_frame_1 - 0.017 15.3 3.5 0.028 14.6 3.5 1.3 1 0 0 1 1 1 0 Phosphotyrosine-binding domain Rx_N PF18052.1 NODE_38088_length_556_cov_252.796545_g30792_i0reverse_frame_1 - 0.043 14.1 0.2 0.065 13.5 0.2 1.4 1 0 0 1 1 1 0 Rx N-terminal domain SRCR_2 PF15494.6 NODE_38088_length_556_cov_252.796545_g30792_i0reverse_frame_1 - 0.089 13.3 0.1 0.17 12.4 0.1 1.7 1 1 0 1 1 1 0 Scavenger receptor cysteine-rich domain ComS PF17584.2 NODE_38082_length_556_cov_7796.105566_g30786_i0reverse_frame_1 - 0.12 11.9 0.5 0.27 10.8 0.5 1.6 1 0 0 1 1 1 0 Bacillus competence protein S CorA PF01544.18 NODE_38078_length_557_cov_1.948276_g30783_i0forward_frame_1 - 3.5e-12 46.3 2.5 5.7e-12 45.5 2.5 1.3 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein FxsA PF04186.13 NODE_38075_length_557_cov_2.408046_g30780_i0reverse_frame_1 - 0.027 14.6 0.2 0.067 13.3 0.0 1.8 2 0 0 2 2 2 0 FxsA cytoplasmic membrane protein RPM2 PF08579.11 NODE_38070_length_557_cov_8.804598_g30775_i0reverse_frame_1 - 0.029 14.8 0.7 0.046 14.1 0.7 1.3 1 0 0 1 1 1 0 Mitochondrial ribonuclease P subunit (RPM2) zf-C2H2_7 PF15269.6 NODE_38070_length_557_cov_8.804598_g30775_i0reverse_frame_1 - 1.2 9.2 7.7 1.6 8.9 0.9 2.5 2 0 0 2 2 2 0 Zinc-finger Apocytochr_F_C PF01333.19 NODE_38022_length_557_cov_4807.254789_g30728_i0reverse_frame_1 - 2.5e-35 121.1 0.1 3.6e-35 120.6 0.1 1.2 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF5006 PF16397.5 NODE_38022_length_557_cov_4807.254789_g30728_i0reverse_frame_1 - 0.00029 20.1 0.1 0.00046 19.5 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5006) RnfC_N PF13375.6 NODE_38022_length_557_cov_4807.254789_g30728_i0reverse_frame_1 - 0.078 12.9 0.3 3 7.9 0.1 2.3 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain Phage_holin_3_1 PF05106.12 NODE_38022_length_557_cov_4807.254789_g30728_i0reverse_frame_1 - 0.11 13.0 0.5 0.17 12.3 0.5 1.3 1 0 0 1 1 1 0 Phage holin family (Lysis protein S) DUF3981 PF13139.6 NODE_38020_length_557_cov_29485.500000_g30592_i1reverse_frame_1 - 0.00087 19.6 0.3 0.0013 19.1 0.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3981) DUF3327 PF11806.8 NODE_38018_length_558_cov_2.177820_g30726_i0forward_frame_1 - 5.1e-44 149.9 2.2 5.1e-44 149.9 2.2 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF3327) WD40 PF00400.32 NODE_38014_length_558_cov_3.068834_g30722_i0forward_frame_1 - 2.5e-11 43.9 0.3 3.1e-06 27.8 0.2 2.7 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_38014_length_558_cov_3.068834_g30722_i0forward_frame_1 - 0.0025 18.1 0.0 0.87 9.9 0.0 2.5 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain DUF2207 PF09972.9 NODE_38006_length_558_cov_4.065010_g30714_i0forward_frame_1 - 0.48 9.1 4.0 0.51 9.0 4.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) HECW1_helix PF18436.1 NODE_37997_length_558_cov_84.682600_g30705_i0forward_frame_1 - 1 9.5 3.2 2.8 8.1 0.2 2.4 2 0 0 2 2 2 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 DUF913 PF06025.12 NODE_37997_length_558_cov_84.682600_g30705_i0forward_frame_1 - 1.3 8.0 6.5 1.6 7.6 6.5 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) RRN3 PF05327.11 NODE_37997_length_558_cov_84.682600_g30705_i0forward_frame_1 - 2.5 6.5 15.3 3.1 6.2 15.3 1.3 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Presenilin PF01080.17 NODE_37997_length_558_cov_84.682600_g30705_i0forward_frame_1 - 5.6 5.6 11.2 5.5 5.6 11.2 1.1 1 0 0 1 1 1 0 Presenilin Pes-10 PF07149.11 NODE_37997_length_558_cov_84.682600_g30705_i0forward_frame_1 - 6.4 5.7 30.4 4.2 6.3 28.7 1.6 1 1 1 2 2 2 0 Pes-10 Hid1 PF12722.7 NODE_37997_length_558_cov_84.682600_g30705_i0forward_frame_1 - 9 4.3 12.8 9.4 4.2 12.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein NMT1 PF09084.11 NODE_37963_length_559_cov_3.087786_g30675_i0forward_frame_3 - 7.1e-11 42.5 0.0 7.7e-11 42.3 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.20 NODE_37963_length_559_cov_3.087786_g30675_i0forward_frame_3 - 4.4e-10 39.4 0.0 5.4e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1_2 PF13379.6 NODE_37963_length_559_cov_3.087786_g30675_i0forward_frame_3 - 1.6e-08 34.5 0.0 1.9e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 NMT1-like family NMT1_3 PF16868.5 NODE_37963_length_559_cov_3.087786_g30675_i0forward_frame_3 - 2.7e-07 30.3 0.0 3.5e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 NMT1-like family OpuAC PF04069.12 NODE_37963_length_559_cov_3.087786_g30675_i0forward_frame_3 - 3.8e-06 26.7 0.1 4.6e-06 26.4 0.1 1.1 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Phosphonate-bd PF12974.7 NODE_37963_length_559_cov_3.087786_g30675_i0forward_frame_3 - 4.8e-06 26.4 0.1 5.2e-06 26.2 0.1 1.2 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein ALF PF03752.13 NODE_37944_length_559_cov_122.900763_g30656_i0reverse_frame_2 - 0.13 12.2 2.6 2.3 8.3 0.7 2.4 2 0 0 2 2 2 0 Short repeats of unknown function NDUF_B5 PF09781.9 NODE_37933_length_559_cov_249.265267_g30645_i0reverse_frame_3 - 0.013 15.1 0.1 0.017 14.7 0.1 1.3 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit NADHdh_A3 PF14987.6 NODE_37921_length_559_cov_35565.700382_g30537_i1reverse_frame_2 - 0.027 14.8 0.0 0.041 14.2 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 DUF2776 PF10951.8 NODE_37919_length_560_cov_2.316190_g30633_i0reverse_frame_3 - 3.6e-57 194.2 6.9 4.2e-57 194.0 6.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2776) Peptidase_M90 PF06167.12 NODE_37918_length_560_cov_2.346667_g30632_i0forward_frame_2 - 1.7e-25 90.1 0.0 2.1e-25 89.8 0.0 1.1 1 0 0 1 1 1 1 Glucose-regulated metallo-peptidase M90 zinc_ribbon_15 PF17032.5 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_3 - 0.012 16.3 0.4 0.021 15.6 0.4 1.3 1 0 0 1 1 1 0 zinc-ribbon family zf-RING_UBOX PF13445.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 1.8e-05 24.7 0.7 4.2e-05 23.5 0.7 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 9.5e-05 22.2 2.1 9.5e-05 22.2 2.1 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 0.0024 18.0 2.5 0.0049 17.0 2.5 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 0.032 14.1 2.6 0.067 13.1 2.6 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 0.35 11.2 5.2 0.095 13.0 1.9 1.7 2 0 0 2 2 2 0 Ring finger domain HSP20 PF00011.21 NODE_37914_length_560_cov_3.266667_g30628_i0forward_frame_3 - 6.1e-22 77.7 0.0 3.8e-17 62.3 0.0 2.1 2 0 0 2 2 2 2 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 NODE_37914_length_560_cov_3.266667_g30628_i0forward_frame_3 - 0.00034 20.1 0.0 0.0059 16.1 0.0 2.2 1 1 0 1 1 1 1 HSP20-like domain found in ArsA MRP-63 PF14978.6 NODE_37913_length_560_cov_3.617143_g30627_i0forward_frame_3 - 0.02 15.5 1.9 0.18 12.5 0.3 2.4 2 2 0 2 2 2 0 Mitochondrial ribosome protein 63 UreF PF01730.16 NODE_37911_length_560_cov_6.885714_g30625_i0forward_frame_2 - 0.052 14.1 0.2 0.088 13.4 0.2 1.4 1 0 0 1 1 1 0 UreF Kri1 PF05178.12 NODE_37909_length_560_cov_68.133333_g30623_i0reverse_frame_3 - 0.72 10.4 2.5 1.9 9.1 0.6 2.1 2 0 0 2 2 2 0 KRI1-like family Histone_H2A_C PF16211.5 NODE_37907_length_560_cov_78.268571_g30621_i0reverse_frame_2 - 0.98 9.2 3.7 1.6 8.6 3.7 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A PrmA PF06325.13 NODE_37888_length_560_cov_205.038095_g30603_i0forward_frame_2 - 2.2e-13 50.3 0.0 3.1e-12 46.5 0.0 2.0 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 NODE_37888_length_560_cov_205.038095_g30603_i0forward_frame_2 - 0.14 12.9 0.0 8.2 7.2 0.0 2.4 1 1 0 1 1 1 0 Methyltransferase domain ARS2 PF04959.13 NODE_37887_length_560_cov_245.133333_g20992_i2forward_frame_2 - 0.027 14.8 0.0 0.044 14.1 0.0 1.3 1 0 0 1 1 1 0 Arsenite-resistance protein 2 zf-C2H2 PF00096.26 NODE_37887_length_560_cov_245.133333_g20992_i2forward_frame_2 - 0.062 13.8 0.2 0.16 12.5 0.2 1.8 1 0 0 1 1 1 0 Zinc finger, C2H2 type Paired_CXXCH_1 PF09699.10 NODE_37882_length_560_cov_447.097143_g30599_i0reverse_frame_3 - 0.013 15.2 2.3 0.11 12.2 2.3 2.5 1 1 0 1 1 1 0 Doubled CXXCH motif (Paired_CXXCH_1) zf-A20 PF01754.16 NODE_37882_length_560_cov_447.097143_g30599_i0reverse_frame_3 - 0.13 12.2 4.6 1.4 8.9 0.3 2.5 2 0 0 2 2 2 0 A20-like zinc finger zinc-ribbons_6 PF07191.12 NODE_37882_length_560_cov_447.097143_g30599_i0reverse_frame_3 - 0.31 11.0 7.1 0.1 12.6 3.3 1.9 2 0 0 2 2 2 0 zinc-ribbons DUF4880 PF16220.5 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_3 - 0.075 12.9 11.2 21 5.1 0.0 6.0 6 0 0 6 6 6 0 Domain of unknown function (DUF4880) RTTN_N PF14726.6 NODE_37880_length_560_cov_770.554286_g30598_i0forward_frame_3 - 0.00057 20.6 1.9 0.35 11.7 0.1 3.0 1 1 2 3 3 3 3 Rotatin, an armadillo repeat protein, centriole functioning DUF2785 PF10978.8 NODE_37880_length_560_cov_770.554286_g30598_i0forward_frame_3 - 0.0032 17.3 3.0 0.32 10.8 0.4 2.8 1 1 3 4 4 4 3 Protein of unknown function (DUF2785) Glyco_hydro_65C PF03633.15 NODE_37872_length_560_cov_29317.011429_g30592_i0reverse_frame_3 - 0.63 10.0 1.7 2.2 8.2 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain zf-B_box PF00643.24 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 0.0071 16.5 1.9 0.013 15.7 1.9 1.4 1 0 0 1 1 1 1 B-box zinc finger Glyco_transf_8 PF01501.20 NODE_37870_length_561_cov_2.500000_g30590_i0forward_frame_2 - 1.5e-47 162.4 1.8 1.6e-47 162.2 1.8 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 8 Glyco_transf_24 PF18404.1 NODE_37870_length_561_cov_2.500000_g30590_i0forward_frame_2 - 0.0013 18.2 0.7 0.0017 17.9 0.7 1.4 1 1 0 1 1 1 1 Glucosyltransferase 24 Got1 PF04178.12 NODE_37865_length_561_cov_3.131179_g30585_i0reverse_frame_2 - 0.075 13.5 0.5 0.075 13.5 0.5 2.0 2 0 0 2 2 2 0 Got1/Sft2-like family GcrA PF07750.11 NODE_37864_length_561_cov_3.385932_g30584_i0forward_frame_2 - 0.55 10.6 4.3 0.18 12.2 1.3 1.6 2 0 0 2 2 2 0 GcrA cell cycle regulator FLILHELTA PF10306.9 NODE_37861_length_561_cov_5.406844_g30581_i0reverse_frame_3 - 0.19 12.2 2.1 0.23 11.9 1.0 1.8 2 0 0 2 2 2 0 Hypothetical protein FLILHELTA Peptidase_S74 PF13884.6 NODE_37861_length_561_cov_5.406844_g30581_i0forward_frame_3 - 4e-06 27.1 0.6 7.1e-06 26.3 0.6 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase DAGK_acc PF00609.19 NODE_37860_length_561_cov_6.370722_g30580_i0reverse_frame_2 - 0.17 12.2 3.9 0.38 11.1 3.9 1.6 1 0 0 1 1 1 0 Diacylglycerol kinase accessory domain ANAPC4_WD40 PF12894.7 NODE_37857_length_561_cov_60.794677_g30577_i0forward_frame_3 - 0.016 15.5 0.0 0.075 13.3 0.0 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Sec16 PF12932.7 NODE_37857_length_561_cov_60.794677_g30577_i0forward_frame_3 - 0.059 14.0 0.1 0.17 12.5 0.1 1.9 1 1 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region SKG6 PF08693.10 NODE_37852_length_561_cov_81.247148_g30572_i0forward_frame_2 - 0.022 14.2 11.1 0.035 13.5 11.1 1.4 1 0 0 1 1 1 0 Transmembrane alpha-helix domain OrfB_Zn_ribbon PF07282.11 NODE_37852_length_561_cov_81.247148_g30572_i0forward_frame_2 - 0.048 13.6 2.6 0.098 12.6 2.6 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Capsid_NCLDV PF04451.12 NODE_37850_length_561_cov_86.294677_g30570_i0reverse_frame_3 - 0.0026 17.6 2.1 0.0049 16.7 0.1 1.9 2 0 0 2 2 2 1 Large eukaryotic DNA virus major capsid protein DUF3099 PF11298.8 NODE_37850_length_561_cov_86.294677_g30570_i0reverse_frame_3 - 0.11 12.7 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) DUF4281 PF14108.6 NODE_37831_length_561_cov_202.163498_g30552_i0reverse_frame_3 - 1.4e-25 90.1 2.9 1.8e-25 89.8 2.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4281) Tryp_alpha_amyl PF00234.22 NODE_37831_length_561_cov_202.163498_g30552_i0reverse_frame_2 - 0.99 9.9 5.7 0.39 11.2 0.4 2.3 1 1 1 2 2 2 0 Protease inhibitor/seed storage/LTP family DUF92 PF01940.16 NODE_37831_length_561_cov_202.163498_g30552_i0forward_frame_2 - 0.26 10.7 0.0 0.33 10.3 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein DUF92 Med6 PF04934.14 NODE_37820_length_561_cov_640.095057_g30541_i0reverse_frame_3 - 0.099 12.4 1.7 1.1 9.1 0.1 2.1 1 1 1 2 2 2 0 MED6 mediator sub complex component COPI_assoc PF08507.10 NODE_37820_length_561_cov_640.095057_g30541_i0forward_frame_3 - 4.6e-14 52.6 22.3 6.2e-14 52.2 22.3 1.3 1 1 0 1 1 1 1 COPI associated protein DUF4231 PF14015.6 NODE_37820_length_561_cov_640.095057_g30541_i0forward_frame_3 - 0.12 12.9 7.0 0.045 14.2 2.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) DUF4383 PF14325.6 NODE_37820_length_561_cov_640.095057_g30541_i0forward_frame_3 - 0.68 10.2 11.1 0.55 10.5 0.8 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4383) NADHdh_A3 PF14987.6 NODE_37816_length_561_cov_35430.418251_g30537_i0reverse_frame_2 - 0.028 14.7 0.0 0.041 14.2 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 Thioredoxin PF00085.20 ORF97518 - 4.7e-23 81.1 0.0 6.5e-23 80.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF97518 - 0.0013 19.1 0.1 0.0026 18.2 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF97518 - 0.011 16.0 0.0 0.18 12.1 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin-like OST3_OST6 PF04756.13 ORF97518 - 0.037 13.4 0.0 0.05 13.0 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Redoxin PF08534.10 ORF97518 - 0.048 13.4 0.2 0.12 12.1 0.1 1.6 1 1 1 2 2 2 0 Redoxin Transposase_31 PF04754.12 ORF97388 - 1.3e-28 100.0 0.0 2e-28 99.4 0.0 1.3 1 0 0 1 1 1 1 Putative transposase, YhgA-like DUF1854 PF08909.11 ORF9638 - 0.12 12.2 0.7 0.23 11.3 0.3 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1854) Arf PF00025.21 ORF95786 - 2e-54 183.7 0.0 2.2e-54 183.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF95786 - 5.6e-12 45.9 0.0 7.1e-12 45.6 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF95786 - 5.4e-10 39.1 0.0 5.7e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF95786 - 3e-09 36.6 0.0 4.1e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF95786 - 1.9e-07 30.6 0.2 0.0027 16.9 0.0 2.3 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 ORF95786 - 1.1e-06 28.7 0.0 1.5e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF95786 - 1.4e-06 27.9 0.0 1.8e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region cobW PF02492.19 ORF95786 - 0.00051 19.7 0.3 0.055 13.1 0.1 2.1 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain GTP_EFTU PF00009.27 ORF95786 - 0.0011 18.5 0.1 0.069 12.7 0.0 2.1 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain PduV-EutP PF10662.9 ORF95786 - 0.0044 16.8 0.1 0.037 13.8 0.1 2.1 2 1 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF95786 - 0.03 14.2 0.0 6.6 6.6 0.1 2.1 2 0 0 2 2 2 0 RsgA GTPase MeaB PF03308.16 ORF95786 - 0.054 12.5 0.3 4.2 6.3 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 ORF95786 - 0.057 14.0 0.8 0.1 13.1 0.7 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF95786 - 0.065 13.5 0.6 0.18 12.1 0.6 1.8 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF95786 - 0.067 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 ORF95786 - 0.07 13.1 0.5 1.8 8.4 0.2 2.1 2 0 0 2 2 2 0 NACHT domain NTP_transf_2 PF01909.23 ORF95786 - 0.079 13.3 0.2 0.13 12.6 0.2 1.3 1 0 0 1 1 1 0 Nucleotidyltransferase domain SRP54 PF00448.22 ORF95786 - 0.088 12.4 0.2 0.15 11.7 0.2 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 ORF95786 - 0.089 13.2 0.4 0.67 10.3 0.1 2.0 2 0 0 2 2 2 0 AAA ATPase domain TrwB_AAD_bind PF10412.9 ORF95786 - 0.092 11.6 0.3 0.13 11.1 0.3 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_7 PF12775.7 ORF95786 - 0.13 11.8 0.1 0.19 11.2 0.1 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 ORF95786 - 0.13 12.2 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 ORF95786 - 0.17 12.1 0.4 0.2 11.8 0.4 1.5 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF95786 - 0.22 11.3 0.3 1.2 8.8 0.1 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Mg_chelatase PF01078.21 ORF95786 - 0.22 10.9 0.2 0.36 10.2 0.2 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Pro_isomerase PF00160.21 ORF95481 - 1e-44 152.6 0.4 1.5e-44 152.1 0.4 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GST_C_2 PF13410.6 ORF94260 - 1.3 9.1 4.4 2.3 8.3 0.3 2.8 2 2 0 2 2 2 0 Glutathione S-transferase, C-terminal domain A_deaminase_N PF08451.11 ORF92937 - 0.00048 20.4 0.3 0.0008 19.7 0.3 1.5 1 0 0 1 1 1 1 Adenosine/AMP deaminase N-terminal RRM_1 PF00076.22 ORF92569 - 4.3e-08 32.9 0.1 9.7e-08 31.7 0.1 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) UQ_con PF00179.26 ORF9166 - 5.6e-38 129.8 0.1 7.1e-38 129.4 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF9166 - 0.0066 16.2 0.0 0.013 15.2 0.0 1.6 1 1 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF9166 - 0.075 13.3 0.8 0.1 12.9 0.8 1.4 1 1 0 1 1 1 0 RWD domain Casc1 PF12366.8 ORF9166 - 0.2 11.1 0.8 0.54 9.7 0.8 1.6 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 Macro PF01661.21 ORF90702 - 2.5e-34 117.9 0.2 4.2e-34 117.1 0.2 1.5 1 0 0 1 1 1 1 Macro domain DUF1264 PF06884.11 ORF90702 - 0.041 13.5 0.0 0.055 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1264) GATase PF00117.28 ORF89080 - 1.3e-05 25.1 0.1 1.7e-05 24.7 0.1 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF89080 - 0.041 13.6 0.0 0.05 13.3 0.0 1.2 1 0 0 1 1 1 0 Peptidase C26 WXG100 PF06013.12 ORF88799 - 0.27 11.5 5.2 1.9 8.7 0.5 2.8 3 0 0 3 3 3 0 Proteins of 100 residues with WXG Fez1 PF06818.15 ORF88799 - 0.35 11.3 15.6 0.62 10.5 15.6 1.4 1 1 0 1 1 1 0 Fez1 Com_YlbF PF06133.11 ORF88799 - 0.37 11.4 13.8 0.28 11.8 2.8 2.5 2 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA DUF5082 PF16888.5 ORF88799 - 0.45 10.8 8.8 0.39 11.0 1.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) THOC7 PF05615.13 ORF88799 - 4 7.7 14.6 2.3 8.5 2.8 2.3 1 1 0 2 2 2 0 Tho complex subunit 7 OmpH PF03938.14 ORF88799 - 4.8 7.5 16.4 4.5 7.6 2.7 2.2 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Cep57_CLD_2 PF14197.6 ORF88799 - 6.8 6.9 17.2 0.091 12.9 2.3 3.5 3 1 0 3 3 3 0 Centrosome localisation domain of PPC89 zf-PHD-like PF15446.6 ORF88023 - 0.032 13.9 0.9 0.054 13.1 0.9 1.3 1 0 0 1 1 1 0 PHD/FYVE-zinc-finger like domain DUF4116 PF13475.6 ORF83587 - 1.1e-21 76.3 0.0 1.9e-08 33.9 0.0 3.2 3 0 0 3 3 3 3 Domain of unknown function (DUF4116) 3HCDH_RFF PF18321.1 ORF83587 - 4.7 7.7 9.9 0.55 10.7 4.1 2.5 2 1 1 3 3 3 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Peptidase_M20 PF01546.28 ORF82257 - 2.3e-11 43.8 0.0 3.3e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Endostatin PF06482.11 ORF81290 - 0.86 9.0 4.5 1 8.7 4.5 1.1 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin Mito_carr PF00153.27 ORF78629 - 4.3e-31 106.7 1.7 1.9e-21 75.8 0.1 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein MFS_1 PF07690.16 ORF75101 - 6.1e-26 91.2 18.3 7.4e-26 90.9 18.3 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF75101 - 1e-06 27.9 11.3 1.3e-06 27.6 6.1 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter OATP PF03137.20 ORF75101 - 7.5e-05 21.2 4.2 0.035 12.4 0.1 2.0 1 1 1 2 2 2 2 Organic Anion Transporter Polypeptide (OATP) family MFS_2 PF13347.6 ORF75101 - 0.0051 15.4 7.6 0.0096 14.5 7.6 1.5 1 1 0 1 1 1 1 MFS/sugar transport protein MTBP_C PF14920.6 ORF73949 - 0.062 13.0 6.3 0.084 12.6 6.3 1.2 1 0 0 1 1 1 0 MDM2-binding CAF-1_p60_C PF15512.6 ORF73949 - 0.65 10.4 13.2 2.7 8.5 9.4 2.2 2 1 0 2 2 2 0 Chromatin assembly factor complex 1 subunit p60, C-terminal Hid1 PF12722.7 ORF73949 - 2.6 6.1 4.7 2.7 6.0 4.7 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF1298 PF06974.13 ORF73256 - 5.6e-09 36.1 0.0 8e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) CDC45 PF02724.14 ORF71933 - 10 4.3 7.8 12 4.0 7.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Pyr_redox_2 PF07992.14 ORF69304 - 5.8e-06 25.8 0.0 3.5e-05 23.2 0.0 2.1 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF69304 - 0.038 14.5 0.0 0.079 13.5 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase PipA PF07108.11 ORF69304 - 0.056 13.0 0.1 0.062 12.8 0.1 1.2 1 0 0 1 1 1 0 PipA protein Radial_spoke PF04712.12 ORF68251 - 0.00054 19.0 0.0 0.00072 18.6 0.0 1.2 1 0 0 1 1 1 1 Radial spokehead-like protein cNMP_binding PF00027.29 ORF67147 - 7.9e-22 77.1 0.0 1.4e-21 76.4 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF695 PF05117.12 ORF67147 - 0.12 12.5 0.1 0.22 11.7 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF695) SVIP PF15811.5 ORF64844 - 0.027 14.9 1.8 0.046 14.2 1.8 1.4 1 0 0 1 1 1 0 Small VCP/p97-interacting protein Peptidase_M20 PF01546.28 ORF62018 - 2.3e-11 43.8 0.0 3.3e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M35 PF02102.15 ORF61932 - 0.068 12.0 0.4 0.11 11.4 0.4 1.2 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family RNA_pol_Rpb1_3 PF04983.18 ORF61010 - 0.013 15.4 0.8 0.019 14.9 0.8 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 3 Importin_rep_3 PF18806.1 ORF61010 - 0.032 14.3 0.0 0.082 13.0 0.0 1.7 1 0 0 1 1 1 0 Importin 13 repeat Peptidase_C78 PF07910.13 ORF60716 - 4.9e-42 143.8 0.2 6e-42 143.5 0.2 1.0 1 0 0 1 1 1 1 Peptidase family C78 Peptidase_C54 PF03416.19 ORF60716 - 0.18 11.2 2.4 0.32 10.4 0.6 1.9 1 1 0 2 2 2 0 Peptidase family C54 DUF4535 PF15054.6 ORF60716 - 0.31 10.8 1.2 4.4 7.1 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4535) RINGv PF12906.7 ORF60531 - 7.2e-15 54.8 2.4 1.2e-14 54.1 2.4 1.3 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF60531 - 0.0024 18.0 2.0 0.0039 17.3 2.0 1.4 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF60531 - 0.011 16.0 2.5 0.019 15.3 2.5 1.3 1 0 0 1 1 1 0 Ring finger domain PHD_4 PF16866.5 ORF60531 - 0.051 13.7 1.3 0.16 12.1 0.7 1.9 2 0 0 2 2 2 0 PHD-finger BcsB PF03170.13 ORF60531 - 0.072 11.5 0.6 0.085 11.2 0.6 1.1 1 0 0 1 1 1 0 Bacterial cellulose synthase subunit CBM_6 PF03422.15 ORF60531 - 0.075 13.3 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate binding module (family 6) RINGv PF12906.7 ORF60301 - 7.2e-15 54.8 2.4 1.2e-14 54.1 2.4 1.3 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF60301 - 0.0024 18.0 2.0 0.0039 17.3 2.0 1.4 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF60301 - 0.011 16.0 2.5 0.019 15.3 2.5 1.3 1 0 0 1 1 1 0 Ring finger domain PHD_4 PF16866.5 ORF60301 - 0.051 13.7 1.3 0.16 12.1 0.7 1.9 2 0 0 2 2 2 0 PHD-finger BcsB PF03170.13 ORF60301 - 0.072 11.5 0.6 0.085 11.2 0.6 1.1 1 0 0 1 1 1 0 Bacterial cellulose synthase subunit CBM_6 PF03422.15 ORF60301 - 0.075 13.3 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate binding module (family 6) SPOUT_MTase PF02590.17 ORF57398 - 0.56 10.2 5.4 0.15 12.0 2.4 1.6 2 0 0 2 2 2 0 Predicted SPOUT methyltransferase AAA_33 PF13671.6 ORF57132 - 5.4e-12 46.1 0.2 1e-11 45.2 0.2 1.5 1 0 0 1 1 1 1 AAA domain Thioredoxin PF00085.20 ORF5641 - 1.3e-20 73.3 0.0 1.8e-20 72.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF5641 - 0.0016 18.9 0.0 0.0029 18.1 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 ORF5641 - 0.13 11.6 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Ribosomal_L19e PF01280.20 ORF53792 - 8.8e-60 200.9 10.6 8.8e-60 200.9 10.6 1.9 1 1 1 2 2 2 1 Ribosomal protein L19e SCRG1 PF15224.6 ORF51611 - 0.069 13.3 0.7 0.069 13.3 0.7 2.7 2 2 2 4 4 4 0 Scrapie-responsive protein 1 Aa_trans PF01490.18 ORF51454 - 1.8e-35 122.4 1.2 2.1e-35 122.3 1.2 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Bac_rhodopsin PF01036.18 ORF51454 - 0.005 16.4 0.4 0.0057 16.3 0.4 1.4 1 0 0 1 1 1 1 Bacteriorhodopsin-like protein TatC PF00902.18 ORF51454 - 0.52 10.1 5.0 1.8 8.3 5.1 1.9 1 1 0 1 1 1 0 Sec-independent protein translocase protein (TatC) ChpXY PF10216.9 ORF5114 - 0.051 12.7 0.1 0.077 12.1 0.1 1.3 1 0 0 1 1 1 0 CO2 hydration protein (ChpXY) GDPD PF03009.17 ORF5114 - 0.066 12.9 0.0 0.094 12.4 0.0 1.2 1 0 0 1 1 1 0 Glycerophosphoryl diester phosphodiesterase family B9-C2 PF07162.11 ORF50041 - 8.6e-38 130.2 0.0 9.7e-38 130.0 0.0 1.0 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Metal_resist PF13801.6 ORF49089 - 3.7e-21 75.6 1.6 5.1e-21 75.2 1.6 1.2 1 0 0 1 1 1 1 Heavy-metal resistance LTXXQ PF07813.12 ORF49089 - 0.013 16.2 1.7 0.021 15.5 1.7 1.3 1 0 0 1 1 1 0 LTXXQ motif family protein DUF3584 PF12128.8 ORF49089 - 0.014 13.0 0.4 0.017 12.7 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 ORF49089 - 0.075 12.9 0.9 0.18 11.7 0.9 1.5 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain MRP-L47 PF06984.13 ORF49089 - 0.085 13.0 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) BLOC1_2 PF10046.9 ORF49089 - 0.098 13.0 0.4 0.14 12.4 0.4 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HMMR_C PF15908.5 ORF49089 - 0.11 12.8 0.9 0.21 11.9 0.7 1.4 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal DnaJ PF00226.31 ORF4894 - 1.1e-11 44.7 0.0 1.6e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain T4_Gp59_C PF08994.10 ORF48153 - 0.098 13.3 2.5 0.14 12.8 0.4 2.1 1 1 1 2 2 2 0 T4 gene Gp59 loader of gp41 DNA helicase C-term Mog1 PF04603.12 ORF47674 - 1.5e-30 106.3 0.3 2.1e-30 105.9 0.3 1.2 1 0 0 1 1 1 1 Ran-interacting Mog1 protein Peptidase_M24 PF00557.24 ORF47674 - 0.081 12.6 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase family M24 DS PF01916.17 ORF46626 - 2.3e-69 233.8 0.0 2.7e-69 233.6 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Rhodanese PF00581.20 ORF46606 - 4.1e-11 43.4 0.1 5.7e-11 42.9 0.1 1.2 1 0 0 1 1 1 1 Rhodanese-like domain Peptidase_C97 PF05903.14 ORF46104 - 9.5e-35 119.7 0.0 1.3e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 PPPDE putative peptidase domain Pkinase PF00069.25 ORF45081 - 6.7e-05 22.4 0.0 9.3e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain PRKCSH_1 PF13015.6 ORF44795 - 2.4e-18 66.3 0.0 3e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein PRKCSH PF07915.13 ORF44795 - 0.002 19.1 0.8 0.0041 18.1 0.6 1.7 1 1 0 1 1 1 1 Glucosidase II beta subunit-like protein SPOUT_MTase PF02590.17 ORF43504 - 0.56 10.2 5.4 0.15 12.0 2.4 1.6 2 0 0 2 2 2 0 Predicted SPOUT methyltransferase ECH_2 PF16113.5 ORF42014 - 4.6e-30 105.3 0.3 5.3e-30 105.1 0.3 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF4597 PF15366.6 ORF42014 - 0.032 14.0 0.1 0.063 13.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4597) DUF4116 PF13475.6 ORF39934 - 6.3e-28 96.3 0.0 3e-08 33.3 0.0 4.3 2 2 1 4 4 4 4 Domain of unknown function (DUF4116) zf_C2H2_6 PF18450.1 ORF39934 - 0.0048 16.6 0.1 0.37 10.5 0.0 2.4 2 0 0 2 2 2 2 Zinc Finger domain AfsA PF03756.13 ORF39934 - 0.029 14.4 1.6 0.054 13.5 1.6 1.7 1 1 0 1 1 1 0 A-factor biosynthesis hotdog domain Pyr_redox_2 PF07992.14 ORF38441 - 5.8e-06 25.8 0.0 3.5e-05 23.2 0.0 2.1 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF38441 - 0.038 14.5 0.0 0.079 13.5 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase PipA PF07108.11 ORF38441 - 0.056 13.0 0.1 0.062 12.8 0.1 1.2 1 0 0 1 1 1 0 PipA protein HATPase_c PF02518.26 ORF35470 - 9.4e-13 48.7 0.3 2.2e-12 47.5 0.1 1.6 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF35470 - 0.00025 21.0 0.0 0.00051 20.0 0.0 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF35470 - 0.0094 15.8 0.0 0.019 14.8 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Peptidase_C97 PF05903.14 ORF35422 - 9.5e-35 119.7 0.0 1.3e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 PPPDE putative peptidase domain Tim17 PF02466.19 ORF34547 - 4.5e-08 33.4 1.0 6.3e-08 33.0 1.0 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Radial_spoke PF04712.12 ORF32243 - 0.00054 19.0 0.0 0.00072 18.6 0.0 1.2 1 0 0 1 1 1 1 Radial spokehead-like protein EF-hand_7 PF13499.6 ORF31854 - 3.6e-24 85.0 8.5 1.3e-13 51.2 1.5 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF31854 - 5.1e-22 75.7 12.0 2.3e-06 26.7 0.0 4.9 5 0 0 5 5 5 3 EF hand EF-hand_6 PF13405.6 ORF31854 - 5.6e-20 69.5 8.8 4.9e-07 29.2 0.1 4.7 5 0 0 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF31854 - 5.5e-14 51.8 6.7 2.3e-08 33.8 0.1 4.3 3 1 1 4 4 4 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF31854 - 3.2e-12 46.6 0.7 3.5e-07 30.4 0.1 2.6 2 1 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF31854 - 5.8e-11 41.4 3.5 0.00062 19.1 0.0 4.6 4 1 0 4 4 4 3 EF hand EF-hand_14 PF17959.1 ORF31854 - 0.00046 20.5 0.7 0.089 13.1 0.1 2.4 2 0 0 2 2 2 1 EF-hand domain Caleosin PF05042.13 ORF31854 - 0.00075 19.5 0.1 0.87 9.5 0.0 3.0 1 1 1 2 2 2 2 Caleosin related protein EF-hand_4 PF12763.7 ORF31854 - 0.0035 17.3 1.1 3 7.8 0.4 2.5 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand EAP30 PF04157.16 ORF31854 - 0.0074 15.6 0.1 0.11 11.8 0.1 2.2 1 1 0 1 1 1 1 EAP30/Vps36 family SCF PF02404.15 ORF31854 - 0.022 14.1 0.4 0.029 13.7 0.4 1.3 1 0 0 1 1 1 0 Stem cell factor B5 PF03484.15 ORF31854 - 0.032 14.5 0.0 1.5 9.2 0.0 2.4 2 0 0 2 2 2 0 tRNA synthetase B5 domain SUB1_ProdP9 PF18213.1 ORF31854 - 0.037 13.9 0.4 0.08 12.8 0.4 1.6 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 Ca_bind_SSO6904 PF18249.1 ORF31854 - 0.15 12.4 1.7 1.3 9.4 0.1 2.5 2 1 0 2 2 2 0 Calcium binding protein SSO6904 Fur_reg_FbpB PF13040.6 ORF30823 - 0.0038 16.8 0.3 0.013 15.1 0.3 1.9 1 0 0 1 1 1 1 Fur-regulated basic protein B CcmH PF03918.14 ORF30823 - 0.045 13.0 0.0 0.091 12.1 0.0 1.5 1 0 0 1 1 1 0 Cytochrome C biogenesis protein DUF4192 PF13830.6 ORF30735 - 1.4 8.9 8.8 1.7 8.7 8.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4192) LexA_DNA_bind PF01726.16 ORF29664 - 0.05 13.4 0.0 0.13 12.0 0.0 1.8 1 0 0 1 1 1 0 LexA DNA binding domain Vps23_core PF09454.10 ORF2780 - 2.8e-14 52.8 2.8 9.3e-14 51.1 0.1 2.4 3 0 0 3 3 3 1 Vps23 core domain DUF2222 PF09984.9 ORF2780 - 0.012 15.5 0.9 0.02 14.8 0.9 1.3 1 0 0 1 1 1 0 Uncharacterised signal transduction histidine kinase domain (DUF2222) Fusion_gly PF00523.18 ORF2780 - 0.6 8.3 4.7 0.47 8.6 2.9 1.9 1 1 1 2 2 2 0 Fusion glycoprotein F0 Osmo_CC PF08946.10 ORF2780 - 1.9 8.8 9.4 1.1 9.5 0.2 3.1 2 1 1 3 3 3 0 Osmosensory transporter coiled coil THOC7 PF05615.13 ORF2780 - 4.3 7.6 12.7 0.52 10.6 8.3 1.7 2 0 0 2 2 2 0 Tho complex subunit 7 JMY PF15871.5 ORF2780 - 6.4 6.0 13.6 1.6 8.0 5.6 2.7 1 1 2 3 3 3 0 Junction-mediating and -regulatory protein DUF1664 PF07889.12 ORF2780 - 8.8 6.4 9.7 12 6.0 4.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) FKBP_N PF01346.18 ORF2780 - 9.8 7.2 11.5 1.5e+02 3.4 9.4 2.8 2 1 0 2 2 2 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Flu_C_NS1 PF03506.13 ORF27746 - 0.044 13.8 0.0 0.066 13.2 0.0 1.5 1 1 0 1 1 1 0 Influenza C non-structural protein (NS1) Carb_anhydrase PF00194.21 ORF25086 - 9.5e-12 45.0 0.7 1.8e-11 44.1 0.7 1.4 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase MFMR_assoc PF16596.5 ORF24191 - 0.39 11.2 6.5 0.58 10.6 6.5 1.2 1 0 0 1 1 1 0 Disordered region downstream of MFMR MCLC PF05934.11 ORF24191 - 0.65 8.7 3.5 0.8 8.4 3.5 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) PTS_EIIB PF00367.20 ORF22250 - 1.6e-12 46.7 0.1 2.7e-12 46.0 0.1 1.4 1 0 0 1 1 1 1 phosphotransferase system, EIIB GST_C PF00043.25 ORF22057 - 1.1e-08 35.2 0.1 1.7e-08 34.5 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF22057 - 2e-07 30.9 0.1 3.2e-07 30.3 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF22057 - 4.7e-06 26.7 0.2 8e-06 26.0 0.2 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF22057 - 2.8e-05 24.4 0.0 0.00013 22.3 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain CLAG PF03805.13 ORF22057 - 0.0076 13.9 0.0 0.0087 13.7 0.0 1.0 1 0 0 1 1 1 1 Cytoadherence-linked asexual protein GST_N PF02798.20 ORF22057 - 0.017 15.5 0.0 0.035 14.5 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF22057 - 0.11 12.8 0.0 0.23 11.8 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Alk_phosphatase PF00245.20 ORF21187 - 3.2e-58 197.6 0.3 7e-47 160.3 0.0 2.0 1 1 1 2 2 2 2 Alkaline phosphatase Metalloenzyme PF01676.18 ORF21187 - 7.5e-09 35.3 0.3 1e-08 34.9 0.3 1.2 1 0 0 1 1 1 1 Metalloenzyme superfamily Sulfatase PF00884.23 ORF21187 - 0.0013 18.2 0.4 0.032 13.6 0.1 2.2 1 1 1 2 2 2 1 Sulfatase Phosphodiest PF01663.22 ORF21187 - 0.0029 17.3 0.0 0.003 17.2 0.0 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Macro PF01661.21 ORF19046 - 2.5e-34 117.9 0.2 4.2e-34 117.1 0.2 1.5 1 0 0 1 1 1 1 Macro domain DUF1264 PF06884.11 ORF19046 - 0.041 13.5 0.0 0.055 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1264) EF-hand_1 PF00036.32 ORF18635 - 2.2e-10 39.3 9.2 4.7e-05 22.6 2.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF18635 - 1.2e-08 34.2 7.4 0.0012 18.6 0.6 2.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF18635 - 1.1e-06 29.0 14.5 0.0017 18.7 1.2 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF18635 - 1.8e-05 24.0 8.0 0.00032 20.0 0.5 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF18635 - 6.5e-05 22.7 8.2 0.024 14.5 0.9 2.8 3 0 0 3 3 3 2 EF-hand domain pair BUD22 PF09073.10 ORF18635 - 0.005 16.3 18.9 0.0061 15.9 18.9 1.1 1 0 0 1 1 1 1 BUD22 CorA PF01544.18 ORF18635 - 0.04 13.2 0.1 0.057 12.7 0.1 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein EF-hand_4 PF12763.7 ORF18635 - 0.06 13.3 2.8 1.8 8.5 0.1 2.3 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_14 PF17959.1 ORF18635 - 0.14 12.5 2.3 1.1 9.7 0.5 2.4 2 1 0 2 2 2 0 EF-hand domain SAPS PF04499.15 ORF18635 - 4.2 6.0 8.5 4 6.1 8.5 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein CobT PF06213.12 ORF18635 - 7 6.0 29.8 10 5.4 29.8 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT ubiquitin PF00240.23 ORF17591 - 0.048 13.4 0.0 0.15 11.9 0.0 1.8 2 0 0 2 2 2 0 Ubiquitin family PCP_red PF08369.10 ORF17591 - 0.053 13.8 0.0 0.17 12.1 0.0 1.8 1 0 0 1 1 1 0 Proto-chlorophyllide reductase 57 kD subunit MFS_1 PF07690.16 ORF16801 - 0.14 11.0 18.7 0.19 10.6 10.2 2.0 1 1 0 2 2 2 0 Major Facilitator Superfamily LELP1 PF15042.6 ORF13290 - 0.088 13.2 2.2 0.1 13.0 1.2 1.6 1 1 0 1 1 1 0 Late cornified envelope-like proline-rich protein 1 FTA4 PF13093.6 ORF12011 - 0.00031 20.7 5.2 0.049 13.5 2.5 2.1 2 0 0 2 2 2 2 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 NDUF_B6 PF09782.9 ORF12011 - 0.0044 17.2 0.1 0.0073 16.4 0.1 1.4 1 0 0 1 1 1 1 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit RelE PF06296.12 ORF12011 - 0.0047 17.0 0.9 0.012 15.7 0.0 2.0 2 1 0 2 2 2 1 RelE toxin of RelE / RelB toxin-antitoxin system zf-DNA_Pol PF08996.10 ORF12011 - 0.012 15.4 1.0 0.012 15.4 1.0 1.5 2 0 0 2 2 2 0 DNA Polymerase alpha zinc finger DUF1456 PF07308.13 ORF12011 - 0.02 15.2 0.3 0.17 12.3 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1456) HTH_48 PF17906.1 ORF12011 - 0.061 13.4 0.1 3.3 7.9 0.0 2.4 2 0 0 2 2 2 0 HTH domain in Mos1 transposase HSP70 PF00012.20 ORF12011 - 0.76 7.9 9.8 0.061 11.5 0.6 2.0 1 1 1 2 2 2 0 Hsp70 protein DUF2408 PF10303.9 ORF12011 - 2 9.0 7.9 3.7 8.1 7.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) Dpoe2NT PF12213.8 ORF12011 - 6.1 7.2 10.6 1.4 9.2 4.3 2.8 3 0 0 3 3 3 0 DNA polymerases epsilon N terminal GATase PF00117.28 ORF111781 - 1.3e-05 25.1 0.1 1.7e-05 24.7 0.1 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF111781 - 0.041 13.6 0.0 0.05 13.3 0.0 1.2 1 0 0 1 1 1 0 Peptidase C26 Dyp_perox PF04261.12 ORF10610 - 2.8e-70 236.9 0.0 3.1e-70 236.8 0.0 1.0 1 0 0 1 1 1 1 Dyp-type peroxidase family DUF1348 PF07080.11 ORF105281 - 8.5e-63 210.1 4.0 1e-62 209.8 4.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1348) SnoaL_2 PF12680.7 ORF105281 - 7.2e-09 36.2 0.4 1.1e-08 35.6 0.4 1.3 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 ORF105281 - 2.2e-05 24.8 0.1 3.4e-05 24.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL PF07366.12 ORF105281 - 0.0065 16.3 0.1 0.0098 15.7 0.1 1.3 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase DHHC PF01529.20 ORF105231 - 2.3e-15 56.9 9.6 3.9e-15 56.1 9.6 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase Git3 PF11710.8 ORF105231 - 0.064 13.0 3.5 0.086 12.6 3.5 1.1 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 NUDIX PF00293.28 ORF10397 - 2.6e-13 50.1 0.0 3.9e-13 49.6 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain His_Phos_1 PF00300.22 ORF100460 - 4.4e-12 46.1 0.0 4e-05 23.4 0.0 2.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) Exc PF07825.11 ORF100460 - 0.047 13.7 0.1 0.12 12.4 0.0 1.7 2 0 0 2 2 2 0 Excisionase-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks111.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks111.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks111.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks111.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cu_amine_oxid PF01179.20 NODE_38294_length_553_cov_2.245174_g30981_i0forward_frame_1 - 0.02 13.8 1.3 0.025 13.5 1.0 1.2 1 1 0 1 1 1 0 Copper amine oxidase, enzyme domain PEPcase PF00311.17 NODE_38288_length_553_cov_3.277992_g30975_i0reverse_frame_1 - 0.0014 16.9 0.8 0.0018 16.5 0.2 1.5 2 0 0 2 2 2 1 Phosphoenolpyruvate carboxylase ADK PF00406.22 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 5.6e-21 75.2 0.7 2.9e-14 53.4 0.1 2.1 2 0 0 2 2 2 2 Adenylate kinase AAA_33 PF13671.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 2.1e-09 37.7 0.0 4.3e-06 26.9 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_17 PF13207.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 4.6e-09 36.8 2.7 2.6e-06 27.9 0.1 2.6 2 1 1 3 3 3 2 AAA domain AAA PF00004.29 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 2.5e-06 28.0 0.2 7.5e-06 26.4 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.00048 19.9 0.8 0.2 11.3 0.0 2.2 2 0 0 2 2 2 2 Thymidylate kinase AAA_16 PF13191.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0011 19.4 0.0 0.0028 18.0 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_19 PF13245.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0019 18.6 0.0 0.0037 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0019 18.7 0.3 0.016 15.7 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_24 PF13479.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0022 17.8 0.1 0.0034 17.1 0.1 1.4 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0027 17.0 0.0 0.0045 16.3 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_5 PF07728.14 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0032 17.5 0.4 0.056 13.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0038 17.0 0.0 0.0054 16.5 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0044 17.3 0.1 0.011 16.1 0.0 1.7 1 1 1 2 2 2 1 AAA domain ABC_tran PF00005.27 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0051 17.3 0.1 0.011 16.3 0.1 1.5 1 0 0 1 1 1 1 ABC transporter Mg_chelatase PF01078.21 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.011 15.1 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI G-alpha PF00503.20 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.014 14.6 0.1 0.018 14.2 0.1 1.2 1 0 0 1 1 1 0 G-protein alpha subunit KTI12 PF08433.10 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.014 14.8 0.0 0.024 14.1 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 NACHT PF05729.12 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.026 14.4 0.1 0.053 13.4 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_28 PF13521.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.034 14.4 0.0 0.12 12.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.034 14.2 0.0 0.063 13.3 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NTPase_1 PF03266.15 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.036 14.0 1.8 0.069 13.1 0.1 2.0 2 0 0 2 2 2 0 NTPase AAA_10 PF12846.7 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.042 12.8 0.4 0.23 10.4 0.1 1.9 1 1 1 2 2 2 0 AAA-like domain Hydin_ADK PF17213.3 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.05 13.9 0.5 0.3 11.4 0.0 2.1 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain TrwB_AAD_bind PF10412.9 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.09 11.7 0.0 0.16 10.9 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain RNA_helicase PF00910.22 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.1 13.0 0.1 0.22 11.9 0.1 1.6 1 0 0 1 1 1 0 RNA helicase CPT PF07931.12 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.14 12.0 0.1 0.32 10.8 0.0 1.5 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein RDD PF06271.12 NODE_38286_length_553_cov_3.550193_g30973_i0forward_frame_1 - 4.8 7.4 11.3 1.7 8.8 5.0 2.1 1 1 1 2 2 2 0 RDD family DUF5082 PF16888.5 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.016 15.5 1.6 0.11 12.7 1.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DivIC PF04977.15 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.019 14.8 3.6 0.41 10.4 0.2 3.0 2 1 1 3 3 3 0 Septum formation initiator Tim29 PF10171.9 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.027 14.0 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 YscO PF07321.12 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.031 14.2 2.6 0.031 14.2 2.6 2.4 3 0 0 3 3 3 0 Type III secretion protein YscO Prefoldin PF02996.17 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.068 13.1 3.3 1.5 8.7 0.5 2.4 1 1 1 2 2 2 0 Prefoldin subunit DUF2730 PF10805.8 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.11 12.6 1.8 0.16 12.1 1.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) THOC7 PF05615.13 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.17 12.1 5.3 0.054 13.8 2.5 1.6 2 0 0 2 2 2 0 Tho complex subunit 7 Lzipper-MIP1 PF14389.6 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.25 11.7 5.6 1.7 9.0 0.1 2.7 2 1 1 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 ABC_tran_CTD PF16326.5 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.29 11.4 9.2 1.9 8.8 2.5 2.5 1 1 1 2 2 2 0 ABC transporter C-terminal domain ZapB PF06005.12 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_1 - 0.53 10.8 8.2 0.63 10.5 1.4 3.0 3 0 0 3 3 3 0 Cell division protein ZapB Ank_4 PF13637.6 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 6.5e-23 80.8 1.6 8.2e-09 35.8 0.1 2.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 3.6e-20 72.3 1.1 2.8e-15 56.7 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 3.7e-15 54.5 0.3 0.00062 20.0 0.0 4.3 4 0 0 4 4 4 4 Ankyrin repeat Ank PF00023.30 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 3.2e-12 46.3 3.6 0.0019 18.5 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 6.4e-11 42.3 8.2 3e-05 24.2 0.4 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) DUF3981 PF13139.6 NODE_38244_length_553_cov_29713.185328_g30592_i3reverse_frame_1 - 0.0024 18.3 1.8 0.0027 18.1 1.3 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF3981) DUF3981 PF13139.6 NODE_38243_length_553_cov_29713.189189_g30592_i2reverse_frame_1 - 0.0019 18.5 1.5 0.0028 18.0 1.4 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF3981) AOX PF01786.17 NODE_38191_length_554_cov_1171.842004_g30887_i0reverse_frame_1 - 0.14 11.7 1.6 0.2 11.2 1.6 1.3 1 0 0 1 1 1 0 Alternative oxidase EF-hand_7 PF13499.6 NODE_38191_length_554_cov_1171.842004_g30887_i0forward_frame_1 - 8.5e-11 42.2 0.1 1.5e-10 41.4 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_38191_length_554_cov_1171.842004_g30887_i0forward_frame_1 - 1e-09 37.2 1.5 0.0016 17.9 0.0 2.9 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 NODE_38191_length_554_cov_1171.842004_g30887_i0forward_frame_1 - 1.9e-07 30.4 0.1 0.023 14.6 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 NODE_38191_length_554_cov_1171.842004_g30887_i0forward_frame_1 - 7e-07 29.0 0.4 4e-05 23.4 0.0 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 NODE_38191_length_554_cov_1171.842004_g30887_i0forward_frame_1 - 1.2e-05 24.5 2.3 0.016 14.6 0.1 2.7 3 0 0 3 3 3 2 EF hand EF-hand_4 PF12763.7 NODE_38191_length_554_cov_1171.842004_g30887_i0forward_frame_1 - 0.021 14.8 0.1 0.046 13.7 0.0 1.6 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Glyco_trans_1_2 PF13524.6 NODE_38191_length_554_cov_1171.842004_g30887_i0forward_frame_1 - 0.049 14.0 0.0 0.089 13.2 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferases group 1 HK PF02110.15 NODE_38182_length_555_cov_3.040385_g30878_i0reverse_frame_1 - 3.9e-40 137.8 0.8 4.7e-40 137.5 0.8 1.1 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family TPP_enzyme_C PF02775.21 NODE_38182_length_555_cov_3.040385_g30878_i0reverse_frame_1 - 0.099 12.4 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HisKA PF00512.25 NODE_38180_length_555_cov_3.536538_g30876_i0reverse_frame_1 - 1.5e-13 50.6 0.3 2.8e-13 49.7 0.3 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 NODE_38180_length_555_cov_3.536538_g30876_i0reverse_frame_1 - 6.6e-10 39.5 0.0 1.3e-09 38.6 0.0 1.5 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PEPcase_2 PF14010.6 NODE_38180_length_555_cov_3.536538_g30876_i0reverse_frame_1 - 0.0086 14.6 0.0 0.0088 14.6 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Sigma54_AID PF00309.20 NODE_38180_length_555_cov_3.536538_g30876_i0reverse_frame_1 - 0.045 13.6 0.4 0.097 12.5 0.4 1.5 1 0 0 1 1 1 0 Sigma-54 factor, Activator interacting domain (AID) Ras PF00071.22 NODE_38172_length_555_cov_76.903846_g30868_i0forward_frame_1 - 6.1e-16 58.4 0.8 8.4e-16 58.0 0.8 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_38172_length_555_cov_76.903846_g30868_i0forward_frame_1 - 4.5e-08 33.3 0.9 6.3e-08 32.9 0.1 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase GTP_EFTU PF00009.27 NODE_38172_length_555_cov_76.903846_g30868_i0forward_frame_1 - 4.1e-07 29.7 0.1 6.1e-07 29.2 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Arf PF00025.21 NODE_38172_length_555_cov_76.903846_g30868_i0forward_frame_1 - 1.1e-05 24.9 0.9 1.5e-05 24.6 0.9 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Vac_Fusion PF02346.16 NODE_38172_length_555_cov_76.903846_g30868_i0forward_frame_1 - 0.025 14.2 2.5 0.034 13.8 0.7 2.1 2 0 0 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 LktC PF06261.11 NODE_38166_length_555_cov_101.392308_g30862_i0reverse_frame_1 - 0.086 12.8 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Actinobacillus actinomycetemcomitans leukotoxin activator LktC CBM_1 PF00734.18 NODE_38166_length_555_cov_101.392308_g30862_i0forward_frame_1 - 0.026 14.5 0.4 0.054 13.5 0.4 1.5 1 0 0 1 1 1 0 Fungal cellulose binding domain DUF2909 PF11137.8 NODE_38165_length_555_cov_103.184615_g30861_i0reverse_frame_1 - 0.03 14.2 0.3 0.078 12.9 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2909) Mga PF05043.13 NODE_38151_length_555_cov_268.238462_g30848_i0forward_frame_1 - 1.3 9.6 10.6 0.25 12.0 1.9 3.0 3 1 1 4 4 4 0 Mga helix-turn-helix domain Voltage_CLC PF00654.20 NODE_38136_length_556_cov_2.408829_g30837_i0reverse_frame_2 - 2.1e-15 56.8 0.4 2.1e-15 56.8 0.4 2.0 1 1 1 2 2 2 2 Voltage gated chloride channel NPM1-C PF16276.5 NODE_38133_length_556_cov_2.859885_g30834_i0forward_frame_2 - 0.056 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Nucleophosmin C-terminal domain MFS_1 PF07690.16 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 1.8e-11 43.6 11.0 2.6e-11 43.1 11.0 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 8.5e-07 28.2 6.4 1.2e-06 27.7 6.4 1.2 1 0 0 1 1 1 1 MFS_1 like family Nuc_H_symport PF03825.16 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 4.9e-06 25.8 3.3 6.1e-06 25.5 3.3 1.1 1 0 0 1 1 1 1 Nucleoside H+ symporter LacY_symp PF01306.19 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 0.0047 15.8 3.0 0.0047 15.8 3.0 1.4 1 1 0 1 1 1 1 LacY proton/sugar symporter YibE_F PF07907.11 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 1.5 8.2 15.0 0.44 10.0 5.7 2.2 2 0 0 2 2 2 0 YibE/F-like protein SdpI PF13630.6 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 9 6.5 9.7 2.6 8.3 4.3 2.2 2 0 0 2 2 2 0 SdpI/YhfL protein family Ntox25 PF15530.6 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_2 - 0.095 12.9 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial toxin 25 Macro PF01661.21 NODE_38130_length_556_cov_3.303263_g30831_i0forward_frame_3 - 1.9e-05 24.7 0.0 2.8e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Macro domain Hid1 PF12722.7 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 3.4e-20 71.8 3.2 3.8e-20 71.7 3.2 1.0 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein Dymeclin PF09742.9 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 3.2e-11 42.4 0.1 4.4e-11 41.9 0.1 1.2 1 0 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein SLC12 PF03522.15 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 0.044 12.8 4.4 0.063 12.3 4.4 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Presenilin PF01080.17 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 1.1 7.9 8.1 1.3 7.7 8.1 1.2 1 0 0 1 1 1 0 Presenilin AUX_IAA PF02309.16 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 1.3 8.9 7.5 1.7 8.5 0.0 2.1 2 0 0 2 2 2 0 AUX/IAA family CDC45 PF02724.14 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 7.2 4.8 10.4 8.6 4.5 10.4 1.1 1 0 0 1 1 1 0 CDC45-like protein UPF0020 PF01170.18 NODE_38118_length_556_cov_92.742802_g30820_i0forward_frame_3 - 6.3e-12 45.6 0.0 1.4e-11 44.4 0.0 1.5 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 NODE_38118_length_556_cov_92.742802_g30820_i0forward_frame_3 - 6.1e-05 22.6 0.0 0.00011 21.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 NODE_38118_length_556_cov_92.742802_g30820_i0forward_frame_3 - 6.6e-05 22.7 0.0 9.1e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_38118_length_556_cov_92.742802_g30820_i0forward_frame_3 - 0.00041 21.0 0.0 0.00058 20.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_38118_length_556_cov_92.742802_g30820_i0forward_frame_3 - 0.00048 20.7 0.0 0.00071 20.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 NODE_38118_length_556_cov_92.742802_g30820_i0forward_frame_3 - 0.015 14.6 0.0 0.03 13.6 0.0 1.5 1 1 0 1 1 1 0 N-6 DNA Methylase DUF3810 PF12725.7 NODE_38115_length_556_cov_95.838772_g30817_i0reverse_frame_3 - 1.1 8.5 9.2 1.5 8.1 9.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) eIF-5a PF01287.20 NODE_38098_length_556_cov_156.623800_g30802_i0reverse_frame_3 - 7.6e-13 48.4 0.2 1.4e-12 47.5 0.1 1.5 2 0 0 2 2 2 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold DUF5639 PF18690.1 NODE_38090_length_556_cov_240.345489_g30794_i0reverse_frame_3 - 0.078 13.2 0.8 0.12 12.5 0.8 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5639) CA_like PF10563.9 NODE_38082_length_556_cov_7796.105566_g30786_i0forward_frame_3 - 2.8e-18 66.5 0.0 4.1e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Putative carbonic anhydrase NADHdh_A3 PF14987.6 NODE_38080_length_556_cov_35770.460653_g30537_i2reverse_frame_2 - 0.027 14.8 0.0 0.041 14.2 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 TPR_21 PF09976.9 NODE_38079_length_557_cov_1.505747_g30784_i0reverse_frame_3 - 0.18 11.5 0.1 0.23 11.1 0.1 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain Peripla_BP_1 PF00532.21 NODE_38079_length_557_cov_1.505747_g30784_i0forward_frame_3 - 1.8e-18 67.0 0.1 2.1e-18 66.7 0.1 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 NODE_38079_length_557_cov_1.505747_g30784_i0forward_frame_3 - 4.4e-13 49.4 0.0 5.2e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_3 PF13377.6 NODE_38079_length_557_cov_1.505747_g30784_i0forward_frame_3 - 9e-07 29.4 0.0 1.4e-06 28.7 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_6 PF13458.6 NODE_38079_length_557_cov_1.505747_g30784_i0forward_frame_3 - 0.0011 18.7 0.0 0.39 10.3 0.0 2.7 1 1 2 3 3 3 2 Periplasmic binding protein TERF2_RBM PF16772.5 NODE_38079_length_557_cov_1.505747_g30784_i0forward_frame_3 - 0.089 12.2 0.1 1.5 8.3 0.0 2.2 2 0 0 2 2 2 0 Telomeric repeat-binding factor 2 Rap1-binding motif DAHP_synth_2 PF01474.16 NODE_38079_length_557_cov_1.505747_g30784_i0forward_frame_3 - 0.095 11.2 0.0 0.13 10.7 0.0 1.2 1 0 0 1 1 1 0 Class-II DAHP synthetase family DUF3289 PF11692.8 NODE_38078_length_557_cov_1.948276_g30783_i0reverse_frame_2 - 2.3e-05 24.1 0.1 3e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3289) DUF5494 PF17598.2 NODE_38076_length_557_cov_2.233716_g30781_i0reverse_frame_2 - 0.074 13.2 0.2 0.14 12.3 0.2 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5494) tRNA-synt_1c PF00749.21 NODE_38075_length_557_cov_2.408046_g30780_i0reverse_frame_3 - 2.3e-58 197.6 0.1 2.9e-58 197.2 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain DUF5551 PF17705.1 NODE_38073_length_557_cov_3.109195_g30778_i0forward_frame_2 - 0.047 13.3 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5551) Hydrolase_4 PF12146.8 NODE_38067_length_557_cov_43.030651_g30772_i0reverse_frame_3 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 TMEM192 PF14802.6 NODE_38062_length_557_cov_73.442529_g30767_i0reverse_frame_2 - 0.016 14.3 1.1 0.027 13.6 1.1 1.4 1 0 0 1 1 1 0 TMEM192 family DivIC PF04977.15 NODE_38062_length_557_cov_73.442529_g30767_i0reverse_frame_2 - 0.017 14.8 8.8 0.017 14.8 8.8 2.7 2 1 0 2 2 2 0 Septum formation initiator SlyX PF04102.12 NODE_38062_length_557_cov_73.442529_g30767_i0reverse_frame_2 - 0.68 10.6 5.8 1.3 9.7 4.8 2.1 2 0 0 2 2 2 0 SlyX V_ATPase_I PF01496.19 NODE_38062_length_557_cov_73.442529_g30767_i0reverse_frame_2 - 4.5 5.1 15.8 6.4 4.6 15.7 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Corona_M PF01635.18 NODE_38050_length_557_cov_100.616858_g30755_i0forward_frame_2 - 0.019 14.3 0.1 0.023 14.0 0.1 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein ParBc PF02195.18 NODE_38050_length_557_cov_100.616858_g30755_i0forward_frame_2 - 0.057 13.7 0.0 0.092 13.0 0.0 1.4 1 0 0 1 1 1 0 ParB-like nuclease domain Arf PF00025.21 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 2.6e-71 238.7 0.0 3e-71 238.5 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 3.2e-15 56.4 0.1 4.3e-15 56.0 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 7.9e-15 54.7 0.0 9.3e-15 54.5 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 2.8e-13 49.8 1.0 3.6e-09 36.3 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 5.2e-13 48.9 0.0 6.5e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 1e-10 41.4 0.0 1.3e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 2.8e-06 27.4 0.1 4.4e-06 26.8 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 0.0032 16.8 0.3 0.0056 16.0 0.3 1.6 1 1 0 1 1 1 1 6-phosphofructo-2-kinase cobW PF02492.19 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 0.079 12.5 0.2 0.67 9.5 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Glyco_hydro_65C PF03633.15 NODE_38020_length_557_cov_29485.500000_g30592_i1reverse_frame_3 - 0.62 10.0 1.7 2.2 8.3 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain Peptidase_M20 PF01546.28 NODE_38007_length_558_cov_3.973231_g30715_i0reverse_frame_3 - 7.3e-06 25.8 0.3 1.2e-05 25.2 0.3 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Methyltransf_30 PF05430.11 NODE_38007_length_558_cov_3.973231_g30715_i0reverse_frame_3 - 0.034 14.0 0.0 0.99 9.3 0.0 2.2 2 0 0 2 2 2 0 S-adenosyl-L-methionine-dependent methyltransferase Resistin PF06954.11 NODE_37989_length_558_cov_96.638623_g30697_i0forward_frame_2 - 0.43 11.2 0.0 0.43 11.2 0.0 3.0 2 1 1 3 3 3 0 Resistin TMF_TATA_bd PF12325.8 NODE_37984_length_558_cov_119.311663_g30692_i0forward_frame_2 - 0.0056 16.9 0.7 0.0081 16.4 0.7 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding RelA_SpoT PF04607.17 NODE_37977_length_558_cov_204.036329_g30686_i0reverse_frame_2 - 0.11 12.8 1.8 0.15 12.3 0.3 1.9 2 0 0 2 2 2 0 Region found in RelA / SpoT proteins ATP-synt_10 PF05176.14 NODE_37973_length_558_cov_246.529637_g30682_i0forward_frame_2 - 6e-07 29.0 0.0 8.8e-07 28.4 0.0 1.3 1 0 0 1 1 1 1 ATP10 protein YtfJ_HI0045 PF09695.10 ORF98771 - 8.6e-75 249.7 0.2 9.9e-75 249.6 0.2 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (YtfJ_HI0045) ATP-synt_10 PF05176.14 ORF98771 - 0.05 12.8 0.1 0.064 12.5 0.1 1.3 1 1 0 1 1 1 0 ATP10 protein Pyridox_ox_2 PF12900.7 ORF98771 - 0.098 12.7 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF2922 PF11148.8 ORF98771 - 0.12 12.2 0.0 0.62 9.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2922) DUF1007 PF06226.13 ORF98771 - 0.23 11.4 0.1 0.23 11.4 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1007) HEAT PF02985.22 ORF97537 - 3.3e-12 45.5 11.1 0.0021 18.1 0.0 5.2 5 0 0 5 5 5 4 HEAT repeat HEAT_2 PF13646.6 ORF97537 - 4e-10 40.0 16.6 4.1e-07 30.3 7.3 2.3 1 1 1 2 2 2 2 HEAT repeats HEAT_EZ PF13513.6 ORF97537 - 1.8e-06 28.3 12.1 0.11 13.1 0.1 4.2 4 0 0 4 4 4 3 HEAT-like repeat Cnd1 PF12717.7 ORF97537 - 1.4e-05 25.2 1.7 0.12 12.4 0.1 3.1 1 1 2 3 3 3 3 non-SMC mitotic condensation complex subunit 1 RTP1_C1 PF10363.9 ORF97537 - 2.6e-05 24.4 2.3 0.88 9.8 0.1 3.3 1 1 2 3 3 3 3 Required for nuclear transport of RNA pol II C-terminus 1 Arm PF00514.23 ORF97537 - 5.9e-05 23.0 6.7 0.74 9.9 0.3 4.0 4 0 0 4 4 4 2 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.20 ORF97537 - 0.00024 19.8 0.5 0.0008 18.1 0.2 1.7 1 1 1 2 2 2 1 Adaptin N terminal region Cohesin_HEAT PF12765.7 ORF97537 - 0.0013 19.0 8.7 1.1 9.6 0.1 4.2 4 0 0 4 4 4 2 HEAT repeat associated with sister chromatid cohesion Med8 PF10232.9 ORF97537 - 0.061 12.9 0.1 0.099 12.2 0.1 1.2 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 Vitellogenin_N PF01347.22 ORF97537 - 0.18 10.1 0.1 0.25 9.7 0.1 1.2 1 0 0 1 1 1 0 Lipoprotein amino terminal region HEAT_PBS PF03130.16 ORF97537 - 2.4 9.1 7.5 15 6.6 0.1 3.7 3 1 0 3 3 3 0 PBS lyase HEAT-like repeat Kelch_5 PF13854.6 ORF97409 - 6.2e-09 35.6 0.1 0.012 15.6 0.0 3.3 3 0 0 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF97409 - 0.00035 20.1 3.4 0.0038 16.8 0.1 3.4 2 1 1 3 3 3 1 Kelch motif Kelch_4 PF13418.6 ORF97409 - 0.00038 20.4 1.9 0.041 13.9 0.0 3.3 4 0 0 4 4 4 1 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF97409 - 0.00062 20.0 1.5 0.052 13.8 0.3 3.0 3 0 0 3 3 3 1 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF97409 - 0.00067 19.9 0.6 2.6 8.5 0.1 3.2 3 0 0 3 3 3 2 Kelch motif Rotamase PF00639.21 ORF95521 - 4.8e-09 37.1 0.0 7.1e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF95521 - 2.3e-06 28.2 0.0 2.9e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF95521 - 0.0014 19.5 0.0 0.002 19.0 0.0 1.3 1 0 0 1 1 1 1 PPIC-type PPIASE domain HEAT_2 PF13646.6 ORF92326 - 1.3e-30 105.6 18.3 2.4e-17 63.1 2.7 2.3 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF92326 - 1.5e-25 87.0 11.0 1.5e-06 27.9 0.1 5.3 4 1 0 5 5 5 5 HEAT repeat HEAT_EZ PF13513.6 ORF92326 - 1.3e-14 54.3 16.5 0.00064 20.2 0.1 5.3 4 1 1 5 5 5 5 HEAT-like repeat HEAT_PBS PF03130.16 ORF92326 - 3.1e-13 49.0 24.2 0.0033 17.9 0.9 6.1 6 0 0 6 6 6 4 PBS lyase HEAT-like repeat Arm PF00514.23 ORF92326 - 3.2e-12 46.0 8.2 0.0042 17.1 0.0 5.0 5 0 0 5 5 5 4 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 ORF92326 - 2.6e-08 34.1 0.1 0.009 16.1 0.0 3.0 1 1 0 2 2 2 2 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF92326 - 8.1e-06 26.4 0.0 2.2 8.9 0.0 3.7 2 1 2 4 4 4 2 Vacuolar 14 Fab1-binding region IFRD PF05004.13 ORF92326 - 0.0001 21.6 0.4 1.8 7.6 0.0 3.9 1 1 2 3 3 3 2 Interferon-related developmental regulator (IFRD) Adaptin_N PF01602.20 ORF92326 - 0.011 14.3 0.0 0.13 10.8 0.0 2.1 1 1 1 2 2 2 0 Adaptin N terminal region RasGEF_N_2 PF14663.6 ORF92326 - 0.011 16.1 0.3 69 3.9 0.0 3.9 2 2 2 4 4 4 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain API5 PF05918.11 ORF92326 - 0.023 13.5 6.0 0.12 11.2 0.6 2.3 1 1 1 2 2 2 0 Apoptosis inhibitory protein 5 (API5) TAF6_C PF07571.13 ORF92326 - 0.026 14.9 1.3 0.85 10.0 0.2 3.3 1 1 1 2 2 2 0 TAF6 C-terminal HEAT repeat domain DUF4530 PF15039.6 ORF92326 - 0.06 13.5 0.7 0.17 12.0 0.5 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4530) Ecm29 PF13001.7 ORF92326 - 0.098 11.3 0.1 0.18 10.5 0.0 1.4 1 1 0 1 1 1 0 Proteasome stabiliser RICTOR_N PF14664.6 ORF92326 - 0.2 10.6 0.5 1.6 7.6 0.2 2.3 1 1 0 2 2 2 0 Rapamycin-insensitive companion of mTOR, N-term AAA_18 PF13238.6 ORF89415 - 1.4e-09 38.6 0.0 2.4e-09 37.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF89415 - 1.3e-05 25.4 0.2 6.1e-05 23.2 0.2 1.9 1 1 0 1 1 1 1 AAA domain Guanylate_kin PF00625.21 ORF89415 - 0.00017 21.3 0.0 0.00023 20.9 0.0 1.2 1 0 0 1 1 1 1 Guanylate kinase ABC_tran PF00005.27 ORF89415 - 0.025 15.1 0.0 0.032 14.8 0.0 1.6 1 1 0 1 1 1 0 ABC transporter AAA_28 PF13521.6 ORF89415 - 0.041 14.1 0.0 2.2 8.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF89415 - 0.065 13.6 0.4 0.22 11.9 0.4 1.9 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF89415 - 0.066 13.1 0.0 0.098 12.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_17 PF13207.6 ORF89415 - 0.15 12.5 0.0 7.3 7.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain TauE PF01925.19 ORF88832 - 7.4e-12 45.4 15.8 7.4e-12 45.4 15.8 1.7 2 0 0 2 2 2 1 Sulfite exporter TauE/SafE Alpha_adaptin_C PF02296.16 ORF88125 - 0.0011 19.2 0.0 0.0016 18.6 0.0 1.3 1 0 0 1 1 1 1 Alpha adaptin AP2, C-terminal domain NPHI_C PF08469.10 ORF86459 - 0.026 14.5 4.4 0.07 13.1 3.6 2.1 1 1 1 2 2 2 0 Nucleoside triphosphatase I C-terminal Complex1_LYR_2 PF13233.6 ORF86459 - 0.27 12.0 3.1 0.47 11.2 3.1 1.7 1 1 0 1 1 1 0 Complex1_LYR-like DUF2524 PF10732.9 ORF86459 - 0.33 11.3 7.2 0.31 11.4 5.0 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2524) DUF5390 PF17365.2 ORF86459 - 1.3 9.3 7.8 0.13 12.5 1.6 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5390) FliD_N PF02465.18 ORF86459 - 6 7.6 8.8 2.3 9.0 1.1 2.8 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus SIKE PF05769.11 ORF86401 - 0.0066 16.4 1.2 0.042 13.8 0.8 1.9 1 1 1 2 2 2 1 SIKE family NEMO PF11577.8 ORF86401 - 0.029 14.4 0.1 0.14 12.2 0.1 2.0 1 1 1 2 2 2 0 NF-kappa-B essential modulator NEMO KLRAQ PF10205.9 ORF86401 - 0.085 13.1 0.2 0.16 12.2 0.2 1.5 1 1 0 1 1 1 0 Predicted coiled-coil domain-containing protein Csm1_N PF18504.1 ORF86401 - 0.11 12.9 0.5 0.29 11.5 0.4 1.8 2 0 0 2 2 2 0 Csm1 N-terminal domain Ago_N_1 PF18351.1 ORF84674 - 0.58 10.6 4.6 0.3 11.5 0.5 2.3 2 1 0 2 2 2 0 Fungal Argonaute N-terminal domain DUF848 PF05852.11 ORF80521 - 0.12 12.5 1.1 0.24 11.5 1.1 1.5 1 1 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Neisseria_TspB PF05616.13 ORF7678 - 3.4 6.0 4.4 4.1 5.8 4.4 1.1 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Nup54 PF13874.6 ORF76561 - 8.7e-07 29.1 5.7 8.7e-07 29.1 5.7 1.7 2 0 0 2 2 2 1 Nucleoporin complex subunit 54 DUF4061 PF13270.6 ORF76561 - 1.1 9.6 6.4 0.34 11.3 3.5 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4061) Cas_APE2256 PF09651.10 ORF76361 - 0.14 12.0 0.0 2.5 8.0 0.0 2.1 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_APE2256) YqzM PF14141.6 ORF76361 - 6.7 6.8 6.4 17 5.5 0.9 2.4 2 0 0 2 2 2 0 YqzM-like protein NYAP_N PF15439.6 ORF7631 - 0.01 15.1 0.1 0.012 14.9 0.1 1.1 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter RNase_E_G PF10150.9 ORF75063 - 0.068 12.6 0.2 0.088 12.2 0.2 1.1 1 0 0 1 1 1 0 Ribonuclease E/G family OKR_DC_1_C PF03711.15 ORF75063 - 0.14 12.5 0.0 0.26 11.6 0.0 1.5 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, C-terminal domain GIDA_assoc PF13932.6 ORF72894 - 0.095 12.9 6.5 0.12 12.5 6.5 1.1 1 0 0 1 1 1 0 GidA associated domain CcdA PF07362.12 ORF72894 - 0.21 12.0 2.8 5.6 7.5 0.2 2.7 3 0 0 3 3 3 0 Post-segregation antitoxin CcdA Glutaredoxin PF00462.24 ORF72894 - 0.34 11.2 1.7 0.71 10.1 0.4 2.2 2 0 0 2 2 2 0 Glutaredoxin FapA PF03961.13 ORF72894 - 0.41 9.2 2.8 0.47 9.0 2.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Histone_HNS PF00816.21 ORF72894 - 1.4 9.8 10.2 8.2 7.3 6.4 2.9 1 1 0 2 2 2 0 H-NS histone family Ank PF00023.30 ORF72024 - 0.049 14.1 0.7 0.19 12.2 0.1 2.2 2 0 0 2 2 2 0 Ankyrin repeat CDT1_C PF16679.5 ORF71793 - 0.09 13.2 0.0 0.16 12.5 0.0 1.5 1 0 0 1 1 1 0 DNA replication factor Cdt1 C-terminal domain zf-CCCH PF00642.24 ORF71762 - 9.8e-15 54.0 14.5 9.4e-08 31.8 6.8 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF71762 - 4.6e-08 32.7 12.3 1.9e-05 24.4 4.7 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger zf_CCCH_4 PF18345.1 ORF71762 - 7.8e-07 29.0 17.7 0.0014 18.6 6.8 2.5 2 0 0 2 2 2 2 Zinc finger domain Torus PF16131.5 ORF71762 - 0.00076 20.2 0.4 0.00076 20.2 0.4 1.8 2 0 0 2 2 2 1 Torus domain zf-CCCH_2 PF14608.6 ORF71762 - 0.0051 17.3 11.6 0.012 16.1 4.2 2.4 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Imm_superinfect PF14373.6 ORF71154 - 0.85 9.6 5.8 0.23 11.4 1.9 1.9 2 0 0 2 2 2 0 Superinfection immunity protein Kelch_5 PF13854.6 ORF71094 - 6.2e-09 35.6 0.1 0.012 15.6 0.0 3.3 3 0 0 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF71094 - 0.00035 20.1 3.4 0.0038 16.8 0.1 3.4 2 1 1 3 3 3 1 Kelch motif Kelch_4 PF13418.6 ORF71094 - 0.00038 20.4 1.9 0.041 13.9 0.0 3.3 4 0 0 4 4 4 1 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF71094 - 0.00062 20.0 1.5 0.052 13.8 0.3 3.0 3 0 0 3 3 3 1 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF71094 - 0.00067 19.9 0.6 2.6 8.5 0.1 3.2 3 0 0 3 3 3 2 Kelch motif DUF2661 PF10860.8 ORF69907 - 0.16 12.1 2.1 0.18 11.9 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2661) dsrm PF00035.26 ORF69816 - 0.0001 22.9 0.0 0.00024 21.8 0.0 1.6 1 0 0 1 1 1 1 Double-stranded RNA binding motif KH_1 PF00013.29 ORF69816 - 0.0031 17.3 0.0 0.0068 16.2 0.0 1.6 1 0 0 1 1 1 1 KH domain IstB_IS21 PF01695.17 ORF69816 - 0.071 12.8 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein HNH_repeat PF18780.1 ORF69816 - 0.074 12.9 0.6 0.16 11.8 0.6 1.5 1 0 0 1 1 1 0 Homing endonuclease repeat DUF3933 PF13069.6 ORF69816 - 0.15 12.0 0.2 0.3 11.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3933) RNase_E_G PF10150.9 ORF69623 - 0.068 12.6 0.2 0.088 12.2 0.2 1.1 1 0 0 1 1 1 0 Ribonuclease E/G family OKR_DC_1_C PF03711.15 ORF69623 - 0.15 12.4 0.0 0.27 11.5 0.0 1.4 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, C-terminal domain Aa_trans PF01490.18 ORF69027 - 1e-07 31.0 3.4 1.3e-07 30.7 3.4 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Redoxin PF08534.10 ORF67118 - 1.9e-23 82.8 0.0 2.4e-23 82.5 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 ORF67118 - 1e-15 57.7 0.0 1.3e-15 57.4 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_2 PF13098.6 ORF67118 - 1.3e-06 28.9 0.0 2e-06 28.2 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF67118 - 3.5e-05 24.1 0.0 5.9e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 ORF67118 - 0.00018 21.5 0.0 0.00038 20.4 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 ORF67118 - 0.0021 18.2 0.1 0.0041 17.3 0.1 1.4 1 0 0 1 1 1 1 Thioredoxin-like MAPEG PF01124.18 ORF63081 - 1.4e-13 50.8 3.3 1.4e-13 50.8 3.3 1.7 1 1 1 2 2 2 1 MAPEG family HR_lesion PF05514.11 ORF62643 - 1.3e-05 25.4 0.4 1.7e-05 25.0 0.4 1.2 1 0 0 1 1 1 1 HR-like lesion-inducing DoxX PF07681.12 ORF62643 - 7.2e-05 23.3 2.6 7.2e-05 23.3 2.6 2.0 2 1 0 2 2 2 1 DoxX DoxX_2 PF13564.6 ORF62643 - 8.7e-05 22.6 2.4 0.00028 20.9 2.4 1.9 1 1 0 1 1 1 1 DoxX-like family UPF0239 PF06783.11 ORF62643 - 0.01 16.0 2.9 0.021 15.0 2.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0239) TSGP1 PF07771.11 ORF62643 - 6.6 6.9 12.5 1.6 8.9 9.1 1.7 2 0 0 2 2 2 0 Tick salivary peptide group 1 DUF3040 PF11239.8 ORF62643 - 8.1 6.8 6.0 2.4 8.5 0.8 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3040) DUF505 PF04458.12 ORF6233 - 0.089 11.1 0.1 0.11 10.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) NA37 PF04245.13 ORF6233 - 0.14 11.6 0.1 0.18 11.3 0.1 1.1 1 0 0 1 1 1 0 37-kD nucleoid-associated bacterial protein zinc_ribbon_4 PF13717.6 ORF62206 - 7.6 6.6 6.8 4.3 7.3 1.0 2.9 3 0 0 3 3 3 0 zinc-ribbon domain Mito_carr PF00153.27 ORF62012 - 6.6e-32 109.3 0.9 5.1e-18 64.8 0.0 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein UPF0020 PF01170.18 ORF61744 - 3.4e-06 26.9 0.0 4.6e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 ORF61744 - 4.4e-06 26.4 0.1 9.3e-06 25.3 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase small domain PRMT5 PF05185.16 ORF61744 - 0.0002 21.2 0.4 0.00026 20.9 0.4 1.1 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase Cons_hypoth95 PF03602.15 ORF61744 - 0.00085 19.0 0.0 0.0011 18.7 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Eco57I PF07669.11 ORF61744 - 0.032 14.7 0.0 0.053 14.0 0.0 1.5 1 0 0 1 1 1 0 Eco57I restriction-modification methylase Methyltransf_10 PF05971.12 ORF61744 - 0.047 13.0 0.1 0.061 12.7 0.1 1.1 1 0 0 1 1 1 0 RNA methyltransferase Methyltransf_3 PF01596.17 ORF61744 - 0.12 11.6 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase HALZ PF02183.18 ORF60701 - 0.058 13.6 4.5 0.12 12.7 0.6 2.7 3 0 0 3 3 3 0 Homeobox associated leucine zipper KaiA PF07688.12 ORF60701 - 0.062 13.4 0.8 0.062 13.4 0.8 1.7 2 0 0 2 2 2 0 KaiA C-terminal domain Peptidase_M57 PF12388.8 ORF60701 - 0.2 11.3 0.3 0.31 10.6 0.3 1.2 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase GvpK PF05121.12 ORF60701 - 0.61 10.2 6.8 8.8 6.5 0.1 3.6 3 1 1 4 4 4 0 Gas vesicle protein K Prominin PF05478.11 ORF60701 - 1.3 6.8 11.7 1.6 6.6 11.7 1.1 1 0 0 1 1 1 0 Prominin Fib_alpha PF08702.10 ORF60701 - 2.7 8.1 12.7 2 8.6 1.9 2.3 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Laminin_II PF06009.12 ORF60701 - 3.2 7.8 8.1 0.88 9.6 2.3 2.4 1 1 0 2 2 2 0 Laminin Domain II DivIC PF04977.15 ORF60701 - 3.9 7.3 10.1 0.39 10.5 0.7 3.1 2 2 0 2 2 2 0 Septum formation initiator LMBR1 PF04791.16 ORF60701 - 3.9 6.3 7.4 4.7 6.0 7.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein FapA PF03961.13 ORF60701 - 10 4.6 16.4 8.7 4.8 11.3 1.9 1 1 1 2 2 2 0 Flagellar Assembly Protein A Pro_isomerase PF00160.21 ORF6030 - 2.2e-50 171.0 0.1 2.5e-50 170.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pro_isomerase PF00160.21 ORF58629 - 8.1e-45 152.9 0.1 1.1e-44 152.5 0.1 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Kelch_5 PF13854.6 ORF58415 - 6.2e-09 35.6 0.1 0.012 15.6 0.0 3.3 3 0 0 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF58415 - 0.00035 20.1 3.4 0.0038 16.8 0.1 3.4 2 1 1 3 3 3 1 Kelch motif Kelch_4 PF13418.6 ORF58415 - 0.00038 20.4 1.9 0.041 13.9 0.0 3.3 4 0 0 4 4 4 1 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF58415 - 0.00062 20.0 1.5 0.052 13.8 0.3 3.0 3 0 0 3 3 3 1 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF58415 - 0.00067 19.9 0.6 2.6 8.5 0.1 3.2 3 0 0 3 3 3 2 Kelch motif DUF2951 PF11166.8 ORF58071 - 0.0053 16.9 0.6 0.0053 16.9 0.6 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2951) Arf PF00025.21 ORF56989 - 2.6e-67 225.6 0.2 2.9e-67 225.5 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF56989 - 2e-14 53.9 0.0 3e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF56989 - 5.6e-13 48.7 0.0 6.6e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF56989 - 1.1e-12 47.8 0.0 1.3e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF56989 - 1.8e-11 43.8 0.2 4.6e-07 29.3 0.0 2.3 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF56989 - 1.7e-08 34.1 0.0 2.2e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF56989 - 2.8e-08 33.8 0.0 4.5e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF56989 - 0.00019 21.1 0.1 0.0048 16.4 0.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AAA_18 PF13238.6 ORF56989 - 0.0018 18.8 0.0 0.0037 17.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF56989 - 0.012 15.3 0.1 0.12 12.2 0.0 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation ABC_tran PF00005.27 ORF56989 - 0.11 13.1 0.1 0.12 12.8 0.1 1.5 1 1 0 1 1 1 0 ABC transporter FeoB_N PF02421.18 ORF56989 - 0.14 11.7 0.2 0.4 10.2 0.2 2.0 1 1 0 1 1 1 0 Ferrous iron transport protein B PhoPQ_related PF10142.9 ORF56894 - 4.9e-05 22.1 0.1 7.9e-05 21.5 0.1 1.3 1 1 0 1 1 1 1 PhoPQ-activated pathogenicity-related protein UIM PF02809.20 ORF56894 - 0.012 15.4 3.0 0.012 15.4 3.0 1.7 2 0 0 2 2 2 0 Ubiquitin interaction motif FSH1 PF03959.13 ORF56894 - 0.1 12.2 0.1 0.22 11.1 0.0 1.6 2 0 0 2 2 2 0 Serine hydrolase (FSH1) Pex14_N PF04695.13 ORF54849 - 0.1 13.2 0.4 0.18 12.4 0.4 1.4 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region YlqD PF11068.8 ORF54849 - 0.11 12.8 3.2 0.17 12.3 3.2 1.3 1 1 0 1 1 1 0 YlqD protein Adenyl_cycl_N PF12633.7 ORF52793 - 0.0017 18.3 0.1 0.0023 17.9 0.1 1.2 1 0 0 1 1 1 1 Adenylate cyclase NT domain DUF707 PF05212.12 ORF52793 - 0.012 14.9 0.3 0.022 14.1 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF707) DnaT PF17948.1 ORF52793 - 2.1 8.1 5.7 19 5.0 0.3 3.0 3 0 0 3 3 3 0 DnaT DNA-binding domain YrzK PF17449.2 ORF52172 - 0.012 15.9 0.1 0.028 14.7 0.1 1.7 1 1 0 1 1 1 0 Uncharacterized YrzK-like Yeast-kill-tox PF09207.11 ORF50477 - 1.6 9.4 8.1 0.9 10.2 1.1 2.2 2 0 0 2 2 2 0 Yeast killer toxin zf-CCCH PF00642.24 ORF48616 - 9.8e-15 54.0 14.5 9.4e-08 31.8 6.8 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF48616 - 4.6e-08 32.7 12.3 1.9e-05 24.4 4.7 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger zf_CCCH_4 PF18345.1 ORF48616 - 7.8e-07 29.0 17.7 0.0014 18.6 6.8 2.5 2 0 0 2 2 2 2 Zinc finger domain Torus PF16131.5 ORF48616 - 0.00076 20.2 0.4 0.00076 20.2 0.4 1.8 2 0 0 2 2 2 1 Torus domain zf-CCCH_2 PF14608.6 ORF48616 - 0.0051 17.3 11.6 0.012 16.1 4.2 2.4 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger DiS_P_DiS PF06750.13 ORF47524 - 0.098 12.8 1.7 0.13 12.4 0.1 2.0 2 0 0 2 2 2 0 Bacterial Peptidase A24 N-terminal domain IBP39 PF11422.8 ORF47192 - 0.0037 17.1 0.7 2.2 8.0 0.2 2.1 2 0 0 2 2 2 2 Initiator binding protein 39 kDa NPV_P10 PF05531.12 ORF47146 - 0.19 12.2 2.2 1.9 9.0 0.8 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein KASH_CCD PF14662.6 ORF47146 - 0.3 10.9 9.0 0.13 12.0 5.8 1.9 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Laminin_II PF06009.12 ORF47146 - 0.35 10.9 6.8 0.15 12.1 2.7 2.2 2 1 0 2 2 2 0 Laminin Domain II DUF725 PF05267.12 ORF47146 - 0.39 10.7 11.3 0.3 11.1 3.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF725) DUF1664 PF07889.12 ORF47146 - 0.45 10.6 6.1 0.37 10.8 3.3 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF2570 PF10828.8 ORF47146 - 0.52 10.1 6.0 1.1 9.1 6.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) DUF3523 PF12037.8 ORF47146 - 0.63 9.4 5.3 0.87 8.9 5.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) MORN PF02493.20 ORF42528 - 2.1e-09 36.7 15.1 0.0003 20.5 2.0 4.4 4 0 0 4 4 4 3 MORN repeat Pro_isomerase PF00160.21 ORF42495 - 5.3e-21 75.5 0.0 6.7e-21 75.2 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pro_isomerase PF00160.21 ORF41712 - 6.6e-46 156.5 0.0 7.6e-46 156.3 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PhyH PF05721.13 ORF41456 - 1.8e-34 119.8 0.0 2.4e-34 119.4 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) SPOB_ab PF14682.6 ORF41064 - 1.7 8.8 7.5 12 6.1 2.3 2.3 2 0 0 2 2 2 0 Sporulation initiation phospho-transferase B, C-terminal DUF4995 PF16386.5 ORF38204 - 0.11 12.5 0.1 0.11 12.5 0.1 2.4 2 1 1 3 3 3 0 Domain of unknown function PRA1 PF03208.19 ORF37142 - 0.0067 16.1 3.5 0.014 15.1 3.5 1.4 1 0 0 1 1 1 1 PRA1 family protein Pro_isomerase PF00160.21 ORF34866 - 6.6e-46 156.5 0.0 7.6e-46 156.3 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MIB_HERC2 PF06701.13 ORF33562 - 7.6e-19 67.7 1.5 1.5e-18 66.8 1.5 1.5 1 0 0 1 1 1 1 Mib_herc2 DUF778 PF05608.12 ORF33053 - 0.11 12.8 0.2 0.14 12.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) DUF4205 PF13898.6 ORF32117 - 1.6e-44 152.3 0.0 1.8e-44 152.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4205) VP4_helical PF17478.2 ORF30819 - 0.05 13.0 5.9 0.063 12.7 5.9 1.1 1 0 0 1 1 1 0 Rotavirus VP4 helical domain TMEM82 PF15816.5 ORF30819 - 0.13 11.2 0.6 0.17 10.8 0.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 82 Kelch_5 PF13854.6 ORF30587 - 6.2e-09 35.6 0.1 0.012 15.6 0.0 3.3 3 0 0 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF30587 - 0.00035 20.1 3.4 0.0038 16.8 0.1 3.4 2 1 1 3 3 3 1 Kelch motif Kelch_4 PF13418.6 ORF30587 - 0.00038 20.4 1.9 0.041 13.9 0.0 3.3 4 0 0 4 4 4 1 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF30587 - 0.00062 20.0 1.5 0.052 13.8 0.3 3.0 3 0 0 3 3 3 1 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF30587 - 0.00067 19.9 0.6 2.6 8.5 0.1 3.2 3 0 0 3 3 3 2 Kelch motif Pkinase PF00069.25 ORF30495 - 9.8e-05 21.8 0.0 0.00016 21.2 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain GyrI-like PF06445.15 ORF29873 - 0.0031 17.8 0.2 0.0037 17.6 0.2 1.2 1 0 0 1 1 1 1 GyrI-like small molecule binding domain MID_MedPIWI PF18296.1 ORF29873 - 0.062 13.1 0.3 1.1 9.0 0.3 2.0 1 1 0 1 1 1 0 MID domain of medPIWI DUF3752 PF12572.8 ORF29240 - 1.5e-07 32.1 7.6 2.2e-07 31.5 7.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3752) Chordopox_A35R PF05989.12 ORF2711 - 0.1 12.5 2.8 0.11 12.4 1.7 1.5 1 1 0 1 1 1 0 Chordopoxvirus A35R protein DGCR6 PF07324.11 ORF26314 - 0.0019 17.8 4.9 0.0026 17.4 4.9 1.1 1 0 0 1 1 1 1 DiGeorge syndrome critical region 6 (DGCR6) protein RWD PF05773.22 ORF26314 - 0.0038 17.5 0.1 0.0038 17.5 0.1 1.9 2 1 0 2 2 2 1 RWD domain DFRP_C PF16543.5 ORF26314 - 0.0049 17.3 9.0 0.0049 17.3 9.0 2.4 1 1 1 2 2 2 1 DRG Family Regulatory Proteins, Tma46 TraE PF05309.11 ORF26314 - 0.12 11.7 0.2 0.27 10.6 0.1 1.5 1 1 0 1 1 1 0 TraE protein SSP160 PF06933.11 ORF25418 - 0.017 13.4 8.1 0.02 13.1 8.1 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 ERGIC_N PF13850.6 ORF25418 - 0.31 11.4 2.8 0.17 12.2 0.7 1.7 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Mucin PF01456.17 ORF25418 - 0.38 10.8 12.9 0.49 10.4 12.9 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein Peptidase_M1_N PF17900.1 ORF25001 - 2e-07 31.4 0.0 2.6e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Proteasom_PSMB PF10508.9 ORF25001 - 0.033 12.7 0.0 0.044 12.3 0.0 1.1 1 0 0 1 1 1 0 Proteasome non-ATPase 26S subunit DiS_P_DiS PF06750.13 ORF23581 - 0.098 12.8 1.7 0.13 12.4 0.1 2.0 2 0 0 2 2 2 0 Bacterial Peptidase A24 N-terminal domain DUF848 PF05852.11 ORF23233 - 0.08 13.1 0.8 0.16 12.1 0.8 1.5 1 1 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) TTL PF03133.15 ORF21019 - 1.4e-39 136.0 8.2 5e-39 134.2 8.2 1.7 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF21019 - 1e-07 31.5 0.2 0.00014 21.2 0.0 2.4 2 1 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF21019 - 0.0003 20.1 0.0 0.0013 18.1 0.0 2.0 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF21019 - 0.02 14.5 0.9 0.031 13.8 0.9 1.5 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus DUF4460 PF14687.6 ORF21019 - 0.03 14.4 0.3 0.046 13.8 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) Mito_carr PF00153.27 ORF20460 - 4.8e-19 68.1 0.0 1.6e-12 47.2 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein SPOB_ab PF14682.6 ORF17953 - 1.7 8.8 7.5 12 6.1 2.3 2.3 2 0 0 2 2 2 0 Sporulation initiation phospho-transferase B, C-terminal STIMATE PF12400.8 ORF17776 - 6e-23 81.7 5.7 7.1e-23 81.5 5.7 1.1 1 0 0 1 1 1 1 STIMATE family Pro_isomerase PF00160.21 ORF16867 - 8.1e-45 152.9 0.1 1.1e-44 152.5 0.1 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PP_kinase_C PF13090.6 ORF13702 - 6.9e-67 224.2 0.0 7.8e-67 224.0 0.0 1.0 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain 2 PLDc_2 PF13091.6 ORF13702 - 0.00077 19.4 0.0 0.0013 18.6 0.0 1.5 1 1 0 1 1 1 1 PLD-like domain WD40 PF00400.32 ORF111422 - 1.6e-14 54.0 2.0 1.8e-07 31.8 0.1 4.0 4 0 0 4 4 4 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF111422 - 3.4e-07 30.5 0.0 0.0051 17.1 0.0 3.2 1 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Coatomer_WDAD PF04053.14 ORF111422 - 0.0081 15.2 0.0 0.01 14.9 0.0 1.0 1 0 0 1 1 1 1 Coatomer WD associated region DNA_topoisoIV PF00521.20 ORF110403 - 0.045 12.7 1.1 0.054 12.4 1.1 1.2 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A DUF3860 PF12976.7 ORF110403 - 0.12 12.5 0.1 0.19 11.8 0.1 1.4 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3860) DAGK_cat PF00781.24 ORF109174 - 2.6e-05 23.8 0.0 4.5e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain TMF_DNA_bd PF12329.8 ORF106177 - 0.0016 18.4 2.1 0.0016 18.4 2.1 2.2 2 1 0 2 2 2 1 TATA element modulatory factor 1 DNA binding ZapB PF06005.12 ORF106177 - 0.006 17.0 0.6 0.006 17.0 0.6 1.9 2 0 0 2 2 2 1 Cell division protein ZapB ATG16 PF08614.11 ORF106177 - 0.0066 16.7 0.4 0.0066 16.7 0.4 2.2 2 0 0 2 2 2 1 Autophagy protein 16 (ATG16) GAS PF13851.6 ORF106177 - 0.0091 15.4 0.3 0.0091 15.4 0.3 1.9 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding Prefoldin_2 PF01920.20 ORF106177 - 0.018 15.0 1.3 0.018 15.0 1.3 2.1 2 0 0 2 2 2 0 Prefoldin subunit SlyX PF04102.12 ORF106177 - 0.038 14.6 0.6 0.038 14.6 0.6 1.8 2 0 0 2 2 2 0 SlyX DivIC PF04977.15 ORF106177 - 0.8 9.5 5.2 0.35 10.7 2.5 1.8 2 0 0 2 2 2 0 Septum formation initiator Striatin PF08232.12 ORF106177 - 3.9 8.0 10.5 12 6.5 10.5 1.7 1 1 0 1 1 1 0 Striatin family Pox_A_type_inc PF04508.12 ORF106177 - 8 6.5 13.8 0.75 9.8 2.0 2.8 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat CarboxypepD_reg PF13620.6 ORF104927 - 0.019 15.2 0.0 0.5 10.7 0.0 2.2 2 0 0 2 2 2 0 Carboxypeptidase regulatory-like domain Ribosomal_S15 PF00312.22 ORF103778 - 3.6e-18 65.6 1.3 3.6e-18 65.6 1.3 1.7 2 0 0 2 2 2 1 Ribosomal protein S15 SIN1 PF05422.12 ORF103778 - 0.084 13.4 0.2 0.13 12.8 0.2 1.4 1 0 0 1 1 1 0 Stress-activated map kinase interacting protein 1 (SIN1) OSTbeta PF15048.6 ORF103042 - 5.2 7.2 5.0 16 5.7 0.6 2.8 3 0 0 3 3 3 0 Organic solute transporter subunit beta protein MscS_TM PF12794.7 ORF102760 - 0.0013 17.6 4.7 0.0013 17.6 4.7 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF102760 - 0.0083 16.4 0.0 0.23 11.8 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) Hid1 PF12722.7 ORF102760 - 0.04 12.1 6.7 0.044 11.9 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein LAP1C PF05609.12 ORF102760 - 0.042 13.0 8.5 0.05 12.7 8.5 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) BSMAP PF12280.8 ORF102760 - 0.042 14.1 5.4 0.076 13.2 5.4 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein Serinc PF03348.15 ORF102760 - 0.043 12.7 5.3 0.44 9.4 5.3 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) RR_TM4-6 PF06459.12 ORF102760 - 0.063 13.1 17.1 0.084 12.7 17.1 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CDC45 PF02724.14 ORF102760 - 0.073 11.4 16.5 0.079 11.2 16.5 1.1 1 0 0 1 1 1 0 CDC45-like protein TRP PF06011.12 ORF102760 - 0.08 11.7 0.0 0.12 11.0 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF102760 - 0.091 11.7 4.0 0.18 10.7 4.0 1.7 1 1 0 1 1 1 0 Ceramide synthase regulator SLC12 PF03522.15 ORF102760 - 0.14 11.2 7.4 0.14 11.1 7.4 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF102760 - 0.14 11.9 10.4 1.5 8.5 10.4 2.0 1 1 0 1 1 1 0 Connexin GWT1 PF06423.12 ORF102760 - 0.19 11.8 3.3 1.1 9.4 3.3 2.0 1 1 0 1 1 1 0 GWT1 DUF2828 PF11443.8 ORF102760 - 0.19 9.8 6.5 0.24 9.4 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF102760 - 0.19 11.7 4.8 3.1 7.8 2.9 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C FAM60A PF15396.6 ORF102760 - 0.41 10.6 4.5 0.47 10.4 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF102760 - 0.41 9.8 7.6 0.56 9.3 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF102760 - 0.43 9.4 7.1 0.64 8.8 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter CENP-N PF05238.13 ORF102760 - 0.6 9.4 8.2 0.76 9.0 8.2 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Borrelia_P83 PF05262.11 ORF102760 - 0.65 8.4 16.1 0.71 8.3 16.1 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF102760 - 0.73 8.5 11.7 0.87 8.3 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein V_ATPase_I PF01496.19 ORF102760 - 0.89 7.4 11.1 1.1 7.1 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF102760 - 0.91 8.4 7.0 1.1 8.2 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF102760 - 1.3 7.3 8.3 2.3 6.5 8.3 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 DUF2207 PF09972.9 ORF102760 - 2.3 6.9 8.9 0.13 11.0 2.4 2.2 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) CCSAP PF15748.5 ORF102760 - 2.4 8.3 15.8 2.9 8.0 15.8 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated DUF4045 PF13254.6 ORF102760 - 2.9 7.5 15.0 3.3 7.3 15.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) ECM1 PF05782.11 ORF102760 - 3.7 6.4 14.7 4.5 6.1 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF102760 - 4 6.1 12.4 4.7 5.9 12.4 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CLN3 PF02487.17 ORF102760 - 5.8 5.8 8.4 9.2 5.2 8.4 1.6 1 1 0 1 1 1 0 CLN3 protein DUF2370 PF10176.9 ORF102760 - 6.1 6.4 6.4 38 3.8 6.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF102760 - 7 6.0 36.9 9.1 5.6 36.9 1.1 1 0 0 1 1 1 0 SDA1 Lysine_decarbox PF03641.14 ORF1017 - 8.1e-24 84.2 0.0 1e-23 83.9 0.0 1.1 1 0 0 1 1 1 1 Possible lysine decarboxylase LDcluster4 PF18306.1 ORF1017 - 4.3e-05 23.1 0.1 8.4e-05 22.2 0.1 1.5 1 1 0 1 1 1 1 SLOG cluster4 family zf-C2H2_aberr PF17017.5 ORF101413 - 0.046 13.9 4.1 0.072 13.2 0.4 2.0 1 1 0 2 2 2 0 Aberrant zinc-finger Rad60-SLD_2 PF13881.6 NODE_38436_length_550_cov_1.848544_g31107_i0reverse_frame_1 - 0.00043 20.4 0.2 0.00062 19.8 0.2 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 NODE_38436_length_550_cov_1.848544_g31107_i0reverse_frame_1 - 0.00064 19.4 2.8 0.0015 18.3 2.8 1.6 1 0 0 1 1 1 1 Ubiquitin family PI3K_rbd PF00794.18 NODE_38436_length_550_cov_1.848544_g31107_i0reverse_frame_1 - 0.0042 17.2 0.3 0.006 16.7 0.3 1.3 1 0 0 1 1 1 1 PI3-kinase family, ras-binding domain Ubiquitin_4 PF18036.1 NODE_38436_length_550_cov_1.848544_g31107_i0reverse_frame_1 - 0.03 14.4 1.1 0.064 13.3 1.1 1.7 1 1 0 1 1 1 0 Ubiquitin-like domain ATP-synt_F6 PF05511.11 NODE_38436_length_550_cov_1.848544_g31107_i0reverse_frame_1 - 0.34 11.3 1.8 18 5.8 0.1 2.2 2 0 0 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 Miff PF05644.11 NODE_38423_length_550_cov_67.448544_g31095_i0forward_frame_1 - 0.02 14.6 2.4 0.026 14.2 2.4 1.1 1 0 0 1 1 1 0 Mitochondrial and peroxisomal fission factor Mff TSNAXIP1_N PF15739.5 NODE_38420_length_550_cov_83.137864_g31092_i0forward_frame_1 - 0.086 13.2 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 Translin-associated factor X-interacting N-terminus DUF309 PF03745.14 NODE_38418_length_550_cov_85.299029_g31090_i0forward_frame_1 - 0.15 11.7 0.1 0.27 11.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF309) TMEM210 PF15195.6 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_1 - 0.039 14.4 0.0 0.059 13.8 0.0 1.2 1 0 0 1 1 1 0 TMEM210 family PSI_PsaE PF02427.17 NODE_38399_length_550_cov_628.667961_g31072_i0forward_frame_1 - 7.8e-24 83.1 1.3 1.1e-23 82.6 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE PIN_6 PF17146.4 NODE_38390_length_551_cov_2.517442_g31065_i0reverse_frame_1 - 0.12 12.9 1.8 0.27 11.8 0.9 2.0 2 1 0 2 2 2 0 PIN domain of ribonuclease Haemadin PF09065.10 NODE_38378_length_551_cov_6.430233_g31054_i0forward_frame_1 - 1.4 8.8 4.1 1.7 8.5 1.4 2.4 2 0 0 2 2 2 0 Haemadin Menin PF05053.13 NODE_38363_length_551_cov_132.889535_g31039_i0reverse_frame_1 - 0.011 14.2 0.0 0.014 13.8 0.0 1.1 1 0 0 1 1 1 0 Menin HEAT_2 PF13646.6 NODE_38354_length_551_cov_216.017442_g31031_i0forward_frame_1 - 2.4e-18 66.3 8.2 1.6e-09 38.1 3.0 2.3 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 NODE_38354_length_551_cov_216.017442_g31031_i0forward_frame_1 - 6.1e-13 47.8 5.6 0.001 19.1 0.0 5.1 5 0 0 5 5 5 3 HEAT repeat Cnd1 PF12717.7 NODE_38354_length_551_cov_216.017442_g31031_i0forward_frame_1 - 9.9e-06 25.7 0.2 8.9e-05 22.6 0.1 2.4 1 1 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.8 NODE_38354_length_551_cov_216.017442_g31031_i0forward_frame_1 - 0.00059 19.5 0.3 0.027 14.0 0.1 2.2 2 0 0 2 2 2 1 CLASP N terminal RTP1_C1 PF10363.9 NODE_38354_length_551_cov_216.017442_g31031_i0forward_frame_1 - 0.00071 19.7 0.0 0.11 12.7 0.0 2.7 1 1 0 1 1 1 1 Required for nuclear transport of RNA pol II C-terminus 1 HEAT_EZ PF13513.6 NODE_38354_length_551_cov_216.017442_g31031_i0forward_frame_1 - 0.0038 17.7 2.4 0.0038 17.7 2.4 3.1 2 2 2 4 4 4 2 HEAT-like repeat HEAT_PBS PF03130.16 NODE_38354_length_551_cov_216.017442_g31031_i0forward_frame_1 - 0.0038 17.8 4.8 0.27 12.0 0.8 4.2 4 1 0 4 4 4 1 PBS lyase HEAT-like repeat Cohesin_HEAT PF12765.7 NODE_38354_length_551_cov_216.017442_g31031_i0forward_frame_1 - 0.19 12.0 0.0 0.19 12.0 0.0 3.2 4 0 0 4 4 4 0 HEAT repeat associated with sister chromatid cohesion Presenilin PF01080.17 NODE_38332_length_552_cov_2.595745_g31013_i0reverse_frame_1 - 0.085 11.6 4.9 0.11 11.3 4.9 1.0 1 0 0 1 1 1 0 Presenilin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks112.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks112.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks112.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks112.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:48:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3981 PF13139.6 NODE_38299_length_552_cov_29770.663443_g30592_i4reverse_frame_1 - 0.002 18.5 1.5 0.0028 18.0 1.4 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF3981) FapA PF03961.13 NODE_38296_length_553_cov_2.123552_g30983_i0reverse_frame_3 - 0.0086 14.7 5.8 0.01 14.5 5.8 1.1 1 0 0 1 1 1 1 Flagellar Assembly Protein A YabA PF06156.13 NODE_38296_length_553_cov_2.123552_g30983_i0reverse_frame_3 - 0.068 13.8 1.3 0.068 13.8 1.3 1.9 2 0 0 2 2 2 0 Initiation control protein YabA DUF3287 PF11690.8 NODE_38296_length_553_cov_2.123552_g30983_i0reverse_frame_3 - 0.62 9.8 3.8 3 7.6 1.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3287) RCC1 PF00415.18 NODE_38288_length_553_cov_3.277992_g30975_i0reverse_frame_3 - 0.063 13.9 0.1 0.15 12.7 0.1 1.6 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat RVT_2 PF07727.14 NODE_38283_length_553_cov_4.832046_g30970_i0forward_frame_3 - 0.00041 20.1 0.0 0.0005 19.8 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) CCDC66 PF15236.6 NODE_38282_length_553_cov_7.536680_g30969_i0forward_frame_3 - 0.032 14.1 9.4 0.055 13.3 9.4 1.4 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 66 Ac110_PIF PF07280.11 NODE_38282_length_553_cov_7.536680_g30969_i0forward_frame_3 - 4 7.3 9.4 0.75 9.6 5.0 2.1 2 0 0 2 2 2 0 Per os infectivity factor AC110 FSA_C PF10479.9 NODE_38269_length_553_cov_92.808880_g30956_i0reverse_frame_3 - 0.1 10.8 2.2 0.1 10.7 2.2 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Myb_DNA-bind_6 PF13921.6 NODE_38269_length_553_cov_92.808880_g30956_i0forward_frame_2 - 1 9.7 4.1 60 4.0 4.1 2.5 1 1 0 1 1 1 0 Myb-like DNA-binding domain HTH_43 PF09904.9 NODE_38261_length_553_cov_138.876448_g30949_i0reverse_frame_2 - 0.027 14.4 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix TMEM232 PF15877.5 NODE_38252_length_553_cov_229.640927_g30940_i0reverse_frame_2 - 0.29 10.1 2.8 0.31 10.0 2.8 1.1 1 0 0 1 1 1 0 Transmembrane protein family 232 DUF2730 PF10805.8 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.011 15.9 8.5 0.11 12.6 1.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Rab5-bind PF09311.11 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.025 14.0 13.2 0.017 14.5 10.1 2.1 1 1 0 1 1 1 0 Rabaptin-like protein YkyA PF10368.9 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.052 13.2 15.1 0.068 12.8 15.1 1.2 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein FAM184 PF15665.5 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.085 12.6 14.9 0.24 11.2 14.8 1.9 1 1 0 1 1 1 0 Family with sequence similarity 184, A and B DUF2911 PF11138.8 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.15 11.9 2.8 0.22 11.4 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2911) Bcr-Abl_Oligo PF09036.10 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.2 11.7 3.2 3.9 7.5 0.4 2.8 1 1 2 3 3 3 0 Bcr-Abl oncoprotein oligomerisation domain DUF4407 PF14362.6 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.23 10.8 2.4 0.33 10.3 2.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Baculo_PEP_C PF04513.12 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.3 11.1 6.4 0.93 9.5 6.1 1.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MetOD1 PF18546.1 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.54 10.2 8.8 0.22 11.5 4.8 2.1 2 0 0 2 2 2 0 Metanogen output domain 1 Mga PF05043.13 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.75 10.4 6.3 0.78 10.4 2.4 2.8 1 1 3 4 4 4 0 Mga helix-turn-helix domain Exonuc_VII_L PF02601.15 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 0.94 9.0 12.1 1.4 8.5 12.1 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF3450 PF11932.8 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 1.1 8.5 8.5 1.6 8.0 7.7 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) TMPIT PF07851.13 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 1.3 8.2 11.6 0.89 8.7 6.9 2.0 1 1 0 2 2 2 0 TMPIT-like protein DUF724 PF05266.14 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 1.3 8.8 12.1 0.85 9.4 9.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF724) RecG_N PF17190.4 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 1.4 9.7 11.2 0.12 13.1 3.5 2.4 1 1 1 2 2 2 0 RecG N-terminal helical domain OmpH PF03938.14 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 2.2 8.6 11.7 13 6.1 11.7 2.0 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) PRKG1_interact PF15898.5 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 2.7 9.0 16.7 2 9.4 12.0 2.7 1 1 2 3 3 3 0 cGMP-dependent protein kinase interacting domain LMBR1 PF04791.16 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 3 6.7 6.8 3.2 6.5 6.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein CCDC-167 PF15188.6 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 3.1 8.2 14.1 1.7 9.1 2.3 2.4 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 Fib_alpha PF08702.10 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 3.1 8.0 13.8 1.4 9.1 7.7 2.5 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family FliD_N PF02465.18 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 3.4 8.4 8.1 6 7.6 2.2 2.5 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus FapA PF03961.13 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 3.9 6.0 13.8 1.6 7.3 9.6 1.8 1 1 1 2 2 2 0 Flagellar Assembly Protein A YlqD PF11068.8 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 6 7.3 11.4 9.1 6.7 7.4 2.5 1 1 2 3 3 3 0 YlqD protein DASH_Dam1 PF08653.10 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 7.4 6.5 10.4 9.4 6.1 1.6 3.4 3 0 0 3 3 3 0 DASH complex subunit Dam1 DUF3810 PF12725.7 NODE_38250_length_553_cov_268.660232_g516_i1reverse_frame_2 - 8.7 5.6 7.6 19 4.5 7.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) GTP_EFTU PF00009.27 NODE_38249_length_553_cov_332.106178_g29756_i1forward_frame_2 - 1.7e-35 122.3 0.0 2.2e-35 122.0 0.0 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_38249_length_553_cov_332.106178_g29756_i1forward_frame_2 - 0.0034 17.5 0.1 0.027 14.6 0.1 2.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase Glyco_hydro_65C PF03633.15 NODE_38244_length_553_cov_29713.185328_g30592_i3reverse_frame_3 - 0.62 10.0 1.7 2.2 8.3 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain Glyco_hydro_65C PF03633.15 NODE_38243_length_553_cov_29713.189189_g30592_i2reverse_frame_3 - 0.61 10.0 1.7 2.2 8.3 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain NADHdh_A3 PF14987.6 NODE_38241_length_553_cov_35977.637066_g30537_i3reverse_frame_2 - 0.02 15.2 0.0 0.04 14.2 0.0 1.5 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 ATP-synt_A PF00119.20 NODE_38240_length_554_cov_1.932563_g30934_i0reverse_frame_2 - 0.014 15.4 0.7 0.018 15.0 0.7 1.3 1 0 0 1 1 1 0 ATP synthase A chain PPR PF01535.20 NODE_38200_length_554_cov_193.861272_g30895_i0forward_frame_3 - 1.6e-07 31.1 0.0 0.015 15.5 0.0 3.3 3 0 0 3 3 3 2 PPR repeat PPR_2 PF13041.6 NODE_38200_length_554_cov_193.861272_g30895_i0forward_frame_3 - 1.7e-06 28.1 0.0 0.00015 21.8 0.0 3.1 2 1 1 3 3 3 2 PPR repeat family PPR_long PF17177.4 NODE_38200_length_554_cov_193.861272_g30895_i0forward_frame_3 - 0.03 13.7 0.0 0.04 13.3 0.0 1.3 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Bac_chlorC PF02043.17 NODE_38200_length_554_cov_193.861272_g30895_i0forward_frame_3 - 0.15 12.1 0.0 0.39 10.8 0.0 1.7 1 1 1 2 2 2 0 Bacteriochlorophyll C binding protein BPS1 PF05633.11 NODE_38198_length_554_cov_202.262042_g30893_i0reverse_frame_2 - 0.017 14.2 5.0 0.021 13.9 5.0 1.1 1 0 0 1 1 1 0 Protein BYPASS1-related LapA_dom PF06305.11 NODE_38198_length_554_cov_202.262042_g30893_i0reverse_frame_2 - 0.28 11.0 1.1 0.61 9.9 1.1 1.5 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Pacifastin_I PF05375.13 NODE_38195_length_554_cov_261.086705_g29201_i1forward_frame_2 - 0.44 10.3 7.8 0.54 10.0 1.9 2.4 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) DUF2207 PF09972.9 NODE_38191_length_554_cov_1171.842004_g30887_i0reverse_frame_3 - 1.3 7.7 3.3 1.3 7.7 3.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4661 PF15576.6 NODE_38187_length_555_cov_1.465385_g30883_i0reverse_frame_3 - 3.7 7.4 10.0 4.9 7.0 10.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) FGF-BP1 PF06473.12 NODE_38187_length_555_cov_1.465385_g30883_i0reverse_frame_3 - 8.3 6.2 16.7 10 5.9 16.7 1.2 1 0 0 1 1 1 0 FGF binding protein 1 (FGF-BP1) Pox_VLTF3 PF04947.14 NODE_38183_length_555_cov_2.915385_g30879_i0reverse_frame_2 - 0.017 14.9 0.4 0.021 14.6 0.4 1.2 1 0 0 1 1 1 0 Poxvirus Late Transcription Factor VLTF3 like GoLoco PF02188.17 NODE_38183_length_555_cov_2.915385_g30879_i0forward_frame_3 - 0.076 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 GoLoco motif RVT_2 PF07727.14 NODE_38181_length_555_cov_3.325000_g30877_i0reverse_frame_2 - 2e-07 30.9 0.0 3.9e-07 30.0 0.0 1.4 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) GUB_WAK_bind PF13947.6 NODE_38179_length_555_cov_3.613462_g30875_i0forward_frame_3 - 0.0057 17.4 0.7 0.0088 16.8 0.7 1.3 1 0 0 1 1 1 1 Wall-associated receptor kinase galacturonan-binding RNA_POL_M_15KD PF02150.16 NODE_38166_length_555_cov_101.392308_g30862_i0reverse_frame_2 - 0.042 13.7 0.1 0.11 12.4 0.1 1.7 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit GlyL_C PF12524.8 NODE_38166_length_555_cov_101.392308_g30862_i0forward_frame_2 - 0.017 15.3 0.0 0.034 14.3 0.0 1.5 1 0 0 1 1 1 0 dsDNA virus glycoprotein L C terminal PI3K_C2 PF00792.24 NODE_38166_length_555_cov_101.392308_g30862_i0forward_frame_2 - 0.2 11.6 0.0 0.32 10.9 0.0 1.4 1 1 0 1 1 1 0 Phosphoinositide 3-kinase C2 YajC PF02699.15 NODE_38165_length_555_cov_103.184615_g30861_i0forward_frame_2 - 0.22 11.5 2.1 0.23 11.4 0.3 1.9 2 0 0 2 2 2 0 Preprotein translocase subunit DUF5083 PF16890.5 NODE_38161_length_555_cov_108.534615_g24045_i1forward_frame_3 - 0.079 12.7 1.0 1.5 8.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5083) zf_C2H2_13 PF18508.1 NODE_38153_length_555_cov_198.771154_g30850_i0reverse_frame_3 - 0.027 14.1 0.2 0.094 12.3 0.0 2.0 2 0 0 2 2 2 0 Zinc finger domain DAG_kinase_N PF14513.6 NODE_38153_length_555_cov_198.771154_g30850_i0reverse_frame_3 - 0.034 14.3 0.2 0.04 14.1 0.2 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus PRESAN PF09687.10 NODE_38153_length_555_cov_198.771154_g30850_i0reverse_frame_3 - 0.038 14.5 0.9 0.038 14.5 0.9 1.7 1 1 1 2 2 2 0 Plasmodium RESA N-terminal ERK-JNK_inhib PF15002.6 NODE_38153_length_555_cov_198.771154_g30850_i0reverse_frame_3 - 0.051 13.2 0.6 0.07 12.8 0.6 1.1 1 0 0 1 1 1 0 ERK and JNK pathways, inhibitor Perm-CXXC PF15629.6 NODE_38151_length_555_cov_268.238462_g30848_i0forward_frame_3 - 0.005 17.1 0.3 0.0095 16.2 0.3 1.4 1 0 0 1 1 1 1 Permuted single zf-CXXC unit Ribosomal_S26e PF01283.19 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_3 - 0.07 13.6 3.0 13 6.3 0.1 3.0 2 1 1 3 3 3 0 Ribosomal protein S26e HXXEE PF13787.6 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_3 - 0.21 12.4 0.8 77 4.2 0.0 3.4 3 1 0 3 3 3 0 Protein of unknown function with HXXEE motif RCC1_2 PF13540.6 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_2 - 8.8e-09 34.9 17.4 0.12 12.3 0.1 5.5 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_2 - 0.025 14.7 9.0 18 5.4 0.0 4.8 2 2 2 4 4 4 0 Uncharacterised ACR, YagE family COG1723 DpnD-PcfM PF14207.6 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_2 - 0.083 12.8 0.2 21 5.1 0.0 2.6 2 0 0 2 2 2 0 DpnD/PcfM-like protein NPV_P10 PF05531.12 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_2 - 0.2 12.1 3.8 47 4.5 0.0 3.6 4 0 0 4 4 4 0 Nucleopolyhedrovirus P10 protein TFIIA PF03153.13 NODE_38148_length_555_cov_346.675000_g30845_i0forward_frame_2 - 3.9 7.4 5.8 4.2 7.2 5.8 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF3397 PF11877.8 NODE_38140_length_555_cov_2429.425000_g30443_i1reverse_frame_3 - 0.059 13.6 13.0 0.1 12.8 13.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3397) PhoLip_ATPase_C PF16212.5 ORF97270 - 2.9e-40 138.6 16.5 3.2e-40 138.4 16.5 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal EIF_2_alpha PF07541.12 ORF97182 - 0.022 14.9 1.3 0.6 10.2 0.4 2.3 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 2 alpha subunit DUF3959 PF13105.6 ORF97182 - 0.52 9.8 3.1 1 8.8 3.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Macro PF01661.21 ORF95746 - 6.9e-09 35.8 0.0 4.1e-08 33.3 0.0 1.9 1 1 0 1 1 1 1 Macro domain CUT PF02376.15 ORF95578 - 0.11 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 CUT domain DUF4094 PF13334.6 ORF94952 - 0.19 12.2 0.9 0.48 10.9 0.9 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) Ago_N_1 PF18351.1 ORF94952 - 0.98 9.9 6.2 0.19 12.1 0.9 2.3 2 1 0 2 2 2 0 Fungal Argonaute N-terminal domain Nitrate_red_del PF02613.15 ORF94919 - 1.6e-14 54.1 0.4 2.1e-14 53.7 0.4 1.2 1 0 0 1 1 1 1 Nitrate reductase delta subunit Sec62 PF03839.16 ORF94883 - 6.7 6.1 7.5 8.8 5.8 7.5 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 RTTN_N PF14726.6 ORF9467 - 0.24 12.2 3.8 4.4 8.2 0.2 2.2 2 0 0 2 2 2 0 Rotatin, an armadillo repeat protein, centriole functioning RRN9 PF10680.9 ORF94608 - 0.33 11.3 2.5 0.45 10.8 0.2 2.2 2 1 1 3 3 3 0 RNA polymerase I specific transcription initiation factor PSI_8 PF00796.18 ORF94558 - 1.6e-05 24.6 6.5 1.6e-05 24.6 6.5 2.3 2 0 0 2 2 2 1 Photosystem I reaction centre subunit VIII bZIP_C PF12498.8 ORF9440 - 0.029 15.3 1.2 1.6 9.8 0.1 2.1 2 0 0 2 2 2 0 Basic leucine-zipper C terminal BAR_3 PF16746.5 ORF9440 - 0.044 13.5 0.0 0.36 10.5 0.0 1.9 2 0 0 2 2 2 0 BAR domain of APPL family ATP12 PF07542.11 ORF93846 - 8.3e-05 22.7 0.2 0.00012 22.2 0.2 1.2 1 0 0 1 1 1 1 ATP12 chaperone protein PITH PF06201.13 ORF92335 - 8.8e-29 100.7 0.1 1e-28 100.5 0.1 1.0 1 0 0 1 1 1 1 PITH domain Myb_DNA-bind_4 PF13837.6 ORF92206 - 1 9.8 6.9 6.6 7.2 4.2 2.9 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain Pkinase PF00069.25 ORF90720 - 0.0032 16.9 0.1 0.0093 15.3 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase PF00069.25 ORF90410 - 3.8e-15 56.0 0.0 6.7e-15 55.2 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90410 - 4.4e-09 36.0 0.0 8.1e-09 35.1 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF90410 - 0.036 13.4 0.1 0.089 12.1 0.0 1.6 2 0 0 2 2 2 0 Kinase-like ArfGap PF01412.18 ORF88875 - 7.5 6.7 8.7 1.3 9.2 3.6 2.0 1 1 1 2 2 2 0 Putative GTPase activating protein for Arf DSPn PF14671.6 ORF88752 - 0.05 14.1 0.3 0.09 13.2 0.3 1.3 1 0 0 1 1 1 0 Dual specificity protein phosphatase, N-terminal half S-l_SbsC_C PF18316.1 ORF88752 - 0.16 12.5 1.1 0.21 12.1 0.1 1.7 2 0 0 2 2 2 0 S-layer protein SbsC C-terminal domain G_glu_transpept PF01019.21 ORF87892 - 3.6e-10 39.2 0.0 4.1e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase DUF4045 PF13254.6 ORF87892 - 1.1 8.9 3.0 1.3 8.6 0.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4045) RRN9 PF10680.9 ORF87573 - 0.33 11.3 2.5 0.45 10.8 0.2 2.2 2 1 1 3 3 3 0 RNA polymerase I specific transcription initiation factor TPR_1 PF00515.28 ORF87431 - 8.6e-08 31.7 5.9 0.0069 16.2 0.1 3.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF87431 - 3.1e-06 26.9 7.2 0.005 16.9 0.2 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF87431 - 6e-05 23.0 0.4 0.038 14.1 0.1 2.5 1 1 1 2 2 2 2 Fis1 C-terminal tetratricopeptide repeat TPR_19 PF14559.6 ORF87431 - 0.0021 18.5 4.1 0.068 13.7 0.7 3.3 2 1 1 3 3 3 1 Tetratricopeptide repeat MCLC PF05934.11 ORF87431 - 0.0044 15.8 0.4 0.0055 15.5 0.4 1.1 1 0 0 1 1 1 1 Mid-1-related chloride channel (MCLC) COPI_C PF06957.11 ORF87431 - 0.0074 15.1 1.5 0.012 14.4 1.5 1.3 1 0 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus TPR_8 PF13181.6 ORF87431 - 0.009 16.2 3.2 0.14 12.4 0.1 3.3 2 1 1 3 3 3 1 Tetratricopeptide repeat Thump_like PF18096.1 ORF87431 - 0.056 13.4 0.3 0.09 12.7 0.3 1.4 1 0 0 1 1 1 0 THUMP domain-like Adenine_glyco PF03352.13 ORF87431 - 0.13 12.0 1.2 0.2 11.4 1.2 1.2 1 0 0 1 1 1 0 Methyladenine glycosylase TPR_14 PF13428.6 ORF87431 - 0.35 11.8 2.0 2.5 9.1 0.1 2.9 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF87431 - 0.56 10.9 3.7 4.4 8.0 0.0 3.0 3 1 0 3 3 3 0 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 ORF87431 - 0.75 10.2 3.9 3.7 8.0 0.7 2.6 2 1 1 3 3 3 0 Alkyl sulfatase dimerisation Sulfatase PF00884.23 ORF86931 - 5e-26 91.8 0.4 5.6e-26 91.6 0.4 1.0 1 0 0 1 1 1 1 Sulfatase PSS PF03034.15 ORF8411 - 1.5e-27 97.1 2.8 1.9e-27 96.7 2.8 1.1 1 0 0 1 1 1 1 Phosphatidyl serine synthase MCRS_N PF13325.6 ORF82383 - 0.055 13.5 0.1 0.076 13.0 0.1 1.1 1 0 0 1 1 1 0 N-terminal region of micro-spherule protein Pex24p PF06398.11 ORF82383 - 0.082 11.9 0.3 0.096 11.7 0.3 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Neuropep_like PF15161.6 ORF82383 - 0.13 12.0 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Neuropeptide-like PSS PF03034.15 ORF82113 - 1.5e-27 97.1 2.8 1.9e-27 96.7 2.8 1.1 1 0 0 1 1 1 1 Phosphatidyl serine synthase KAR9 PF08580.10 ORF81308 - 6.1 5.3 8.3 7 5.1 8.3 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 DHHC PF01529.20 ORF80240 - 2.9e-16 59.8 5.7 3.8e-16 59.4 5.7 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase DctP PF03480.13 ORF80240 - 0.016 14.5 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein, family 7 DUF192 PF02643.15 ORF8008 - 0.32 11.2 6.6 27 5.0 0.0 3.2 1 1 0 2 2 2 0 Uncharacterized ACR, COG1430 DUF4381 PF14316.6 ORF77762 - 0.025 14.8 1.0 0.057 13.7 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) PET117 PF15786.5 ORF77762 - 0.045 14.0 0.1 34 4.8 3.7 2.5 2 1 0 2 2 2 0 PET assembly of cytochrome c oxidase, mitochondrial PsbY PF06298.11 ORF77762 - 0.092 12.7 0.2 0.16 11.9 0.2 1.4 1 0 0 1 1 1 0 Photosystem II protein Y (PsbY) SurA_N_3 PF13624.6 ORF75938 - 0.06 13.1 0.8 0.076 12.8 0.8 1.1 1 0 0 1 1 1 0 SurA N-terminal domain FinO_N PF12602.8 ORF75938 - 0.4 11.0 5.9 6.1 7.2 0.0 2.4 1 1 1 2 2 2 0 Fertility inhibition protein N terminal ABC_tran PF00005.27 ORF75829 - 1.6e-14 54.6 0.0 2.4e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF75829 - 2.9e-05 23.6 0.0 3.1e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF75829 - 0.003 17.7 0.7 0.085 13.1 0.7 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ABC_ATPase PF09818.9 ORF75829 - 0.013 14.4 0.0 0.016 14.0 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class DUF4484 PF14831.6 ORF74711 - 0.18 11.8 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4484) XPC-binding PF09280.11 ORF73193 - 0.0013 18.5 3.2 0.038 13.7 2.1 3.0 2 1 0 2 2 2 1 XPC-binding domain TAL_FSA PF00923.19 ORF73193 - 0.079 12.3 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 Transaldolase/Fructose-6-phosphate aldolase COX_ARM PF06481.14 ORF73193 - 0.11 12.5 0.0 0.21 11.5 0.0 1.5 1 0 0 1 1 1 0 COX Aromatic Rich Motif PITH PF06201.13 ORF69729 - 8.8e-29 100.7 0.1 1e-28 100.5 0.1 1.0 1 0 0 1 1 1 1 PITH domain Gly-zipper_YMGG PF13441.6 ORF67847 - 0.011 15.5 41.9 0.035 13.8 15.1 2.5 2 0 0 2 2 2 0 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 ORF67847 - 0.18 11.8 41.5 0.22 11.6 16.9 2.7 2 0 0 2 2 2 0 Glycine zipper Rhabdo_M2 PF04785.12 ORF67444 - 0.063 12.6 0.2 0.094 12.0 0.2 1.3 1 0 0 1 1 1 0 Rhabdovirus matrix protein M2 CLIP_SPH_mas PF18398.1 ORF66689 - 0.047 14.1 0.2 0.48 10.9 0.0 2.2 2 0 0 2 2 2 0 Clip-domain serine protease homolog masquerade DUF4081 PF13312.6 ORF66689 - 0.083 13.1 0.1 0.16 12.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4081) LMBR1 PF04791.16 ORF66594 - 5.9e-08 32.1 4.6 7.6e-08 31.7 4.6 1.1 1 0 0 1 1 1 1 LMBR1-like membrane protein RNase_H PF00075.24 ORF65562 - 2e-09 37.7 0.1 3.6e-09 36.9 0.1 1.4 1 0 0 1 1 1 1 RNase H HU-CCDC81_euk_2 PF18289.1 ORF64630 - 3.1e-07 30.4 0.0 4.7e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_bac_2 PF18175.1 ORF64630 - 0.025 14.5 0.0 0.042 13.7 0.0 1.4 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 DAG_kinase_N PF14513.6 ORF64630 - 0.073 13.3 0.1 0.087 13.0 0.1 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus Cse1 PF08506.10 ORF64558 - 8.7e-07 28.1 0.1 1.1e-06 27.7 0.1 1.2 1 0 0 1 1 1 1 Cse1 ABC_tran PF00005.27 ORF64381 - 1.6e-14 54.6 0.0 2.4e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF64381 - 2.9e-05 23.6 0.0 3.1e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF64381 - 0.003 17.7 0.7 0.085 13.1 0.7 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ABC_ATPase PF09818.9 ORF64381 - 0.013 14.4 0.0 0.016 14.0 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class DLH PF01738.18 ORF64152 - 2.4e-26 92.7 0.0 2.7e-26 92.5 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF64152 - 3.7e-07 29.8 0.4 0.00011 21.7 0.0 2.4 1 1 1 2 2 2 2 Prolyl oligopeptidase family DUF1100 PF06500.11 ORF64152 - 0.00087 18.2 0.0 0.0011 17.8 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1100) Abhydrolase_4 PF08386.10 ORF64152 - 0.0052 16.9 0.0 0.0083 16.2 0.0 1.2 1 0 0 1 1 1 1 TAP-like protein Abhydrolase_3 PF07859.13 ORF64152 - 0.053 13.4 0.2 0.17 11.7 0.0 1.8 1 1 1 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 ORF64152 - 0.061 13.1 0.0 0.076 12.8 0.0 1.1 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase BAAT_C PF08840.11 ORF64152 - 0.15 12.0 0.1 0.59 10.0 0.0 1.8 1 1 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF4229 PF14012.6 ORF63148 - 2 8.5 5.4 3.5 7.8 0.1 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF4229) Pyridoxal_deC PF00282.19 ORF62486 - 1.4e-06 27.3 0.1 1.9e-06 26.9 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain DUF4253 PF14062.6 ORF62486 - 0.027 14.7 0.0 0.042 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) DUF763 PF05559.11 ORF62486 - 0.034 13.4 0.2 0.036 13.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF763) DUF229 PF02995.17 ORF62300 - 7e-15 54.6 5.0 3e-14 52.5 5.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF62300 - 1.1e-06 28.3 0.0 1.3e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF62300 - 0.0012 18.6 0.0 0.0013 18.4 0.0 1.2 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF1980 PF09323.10 ORF6042 - 0.012 15.6 4.9 0.1 12.5 1.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) CRAL_TRIO PF00650.20 ORF60376 - 4.5e-15 55.7 0.1 5.6e-15 55.4 0.1 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF60376 - 0.0052 16.9 0.0 0.0066 16.6 0.0 1.1 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain Ribo_biogen_C PF04034.13 ORF60078 - 0.016 14.9 0.9 0.059 13.1 0.2 2.0 2 0 0 2 2 2 0 Ribosome biogenesis protein, C-terminal ABC_tran PF00005.27 ORF59418 - 1.6e-14 54.6 0.0 2.4e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF59418 - 2.9e-05 23.6 0.0 3.1e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF59418 - 0.003 17.7 0.7 0.085 13.1 0.7 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ABC_ATPase PF09818.9 ORF59418 - 0.013 14.4 0.0 0.016 14.0 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class Phytochelatin PF05023.14 ORF58111 - 1.6e-25 89.6 0.0 1.9e-25 89.3 0.0 1.0 1 0 0 1 1 1 1 Phytochelatin synthase Cdc6_C PF09079.11 ORF58111 - 0.056 13.4 0.0 0.09 12.8 0.0 1.3 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain La PF05383.17 ORF56708 - 2.1e-15 56.5 0.2 3.4e-15 55.8 0.2 1.3 1 0 0 1 1 1 1 La domain RRM_1 PF00076.22 ORF56708 - 4.8e-12 45.5 0.0 7.2e-12 45.0 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF1664 PF07889.12 ORF56123 - 0.0018 18.3 3.7 0.0038 17.2 3.7 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF724 PF05266.14 ORF56123 - 0.0086 15.9 9.3 0.0086 15.9 9.3 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF724) Fib_alpha PF08702.10 ORF56123 - 0.029 14.5 4.4 0.029 14.5 4.4 3.2 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Hid1 PF12722.7 ORF56123 - 1.1 7.2 27.5 1.3 7.0 27.5 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF913 PF06025.12 ORF56123 - 1.9 7.4 14.8 2.4 7.1 14.8 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Caps_synth_GfcC PF06251.11 ORF55963 - 0.015 15.0 3.3 0.63 9.6 2.3 2.1 2 0 0 2 2 2 0 Capsule biosynthesis GfcC TPR_MLP1_2 PF07926.12 ORF55963 - 0.02 14.9 17.7 0.027 14.5 11.2 2.9 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein PEP-utilisers_N PF05524.13 ORF55963 - 0.15 12.2 1.7 0.3 11.2 1.7 1.7 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal DUF4407 PF14362.6 ORF55963 - 0.28 10.5 3.9 0.35 10.2 3.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3450 PF11932.8 ORF55963 - 0.38 10.0 10.9 0.66 9.2 10.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF2203 PF09969.9 ORF55963 - 0.54 11.0 7.0 2.2 9.0 0.1 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF55963 - 1.1 8.3 13.8 1.4 7.9 13.8 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LMBR1 PF04791.16 ORF55963 - 4.2 6.2 6.5 4.6 6.0 6.5 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein FAM76 PF16046.5 ORF55963 - 4.5 6.5 12.1 7 5.9 12.1 1.3 1 0 0 1 1 1 0 FAM76 protein DivIC PF04977.15 ORF55963 - 4.5 7.1 15.5 10 6.0 2.8 3.0 1 1 2 3 3 3 0 Septum formation initiator ATP-synt_E PF05680.12 ORF55963 - 4.9 7.5 7.2 13 6.2 7.2 1.8 1 0 0 1 1 1 0 ATP synthase E chain DUF16 PF01519.16 ORF55963 - 6.8 7.2 15.3 1.3 9.6 10.9 1.9 2 0 0 2 2 2 0 Protein of unknown function DUF16 APG6_N PF17675.1 ORF55963 - 8.1 7.0 26.2 0.51 10.9 14.1 2.6 1 1 2 3 3 3 0 Apg6 coiled-coil region Ead_Ea22 PF13935.6 ORF55963 - 9.4 6.9 10.8 36 5.0 10.8 2.1 1 1 0 1 1 1 0 Ead/Ea22-like protein HU-CCDC81_euk_2 PF18289.1 ORF55852 - 3.1e-07 30.4 0.0 4.7e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_bac_2 PF18175.1 ORF55852 - 0.025 14.5 0.0 0.042 13.7 0.0 1.4 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 DAG_kinase_N PF14513.6 ORF55852 - 0.073 13.3 0.1 0.09 13.0 0.1 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus Glyco_transf_11 PF01531.16 ORF55291 - 0.0007 18.9 0.0 0.00092 18.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 11 GYR PF02756.14 ORF55120 - 0.83 9.4 3.3 1.6 8.5 3.3 1.5 1 0 0 1 1 1 0 GYR motif Thioredoxin_8 PF13905.6 ORF54176 - 0.0054 17.0 0.0 0.011 16.0 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF54176 - 0.047 13.0 0.0 0.058 12.7 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF54176 - 0.17 12.3 0.0 0.24 11.8 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain SGL PF08450.12 ORF52216 - 0.00076 19.1 0.0 0.0011 18.6 0.0 1.2 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 ORF52216 - 0.0036 17.5 0.0 0.0062 16.7 0.0 1.4 1 0 0 1 1 1 1 Arylesterase HCMV_UL139 PF12507.8 ORF50000 - 0.025 15.0 3.1 3.2 8.1 0.1 2.2 2 0 0 2 2 2 0 Human Cytomegalovirus UL139 protein Fez1 PF06818.15 ORF50000 - 0.17 12.4 15.6 0.28 11.6 15.6 1.4 1 1 0 1 1 1 0 Fez1 Com_YlbF PF06133.11 ORF50000 - 0.18 12.4 13.7 0.13 12.9 2.7 2.4 1 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA WXG100 PF06013.12 ORF50000 - 0.35 11.1 5.8 1.6 9.0 0.7 2.8 3 0 0 3 3 3 0 Proteins of 100 residues with WXG DUF5082 PF16888.5 ORF50000 - 0.8 10.0 10.1 0.75 10.1 3.1 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) Cep57_CLD_2 PF14197.6 ORF50000 - 1.9 8.6 15.6 0.098 12.8 2.5 3.5 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 OmpH PF03938.14 ORF50000 - 2 8.8 15.7 4.4 7.6 2.7 2.2 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) THOC7 PF05615.13 ORF50000 - 3.6 7.9 14.5 2.7 8.3 3.2 2.4 1 1 1 2 2 2 0 Tho complex subunit 7 PRKCSH_1 PF13015.6 ORF48752 - 5.1e-19 68.5 0.0 6.5e-19 68.1 0.0 1.1 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein PRKCSH PF07915.13 ORF48752 - 0.00023 22.1 1.7 0.00094 20.1 1.7 2.0 1 1 0 1 1 1 1 Glucosidase II beta subunit-like protein CENP-Q PF13094.6 ORF48752 - 0.082 13.1 5.3 0.12 12.6 5.3 1.2 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit APG6_N PF17675.1 ORF48752 - 0.096 13.2 8.4 0.15 12.6 8.4 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region XkdW PF09636.10 ORF48752 - 0.31 11.2 1.7 0.46 10.6 1.7 1.3 1 0 0 1 1 1 0 XkdW protein Methyltransf_23 PF13489.6 ORF48255 - 3.4e-20 72.5 0.0 4.1e-20 72.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF48255 - 2.1e-17 63.5 0.0 3.4e-17 62.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF48255 - 2.2e-15 57.1 0.0 3.8e-15 56.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF48255 - 4.4e-15 55.6 0.0 8.4e-15 54.7 0.0 1.4 1 1 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 ORF48255 - 2.8e-12 46.7 0.0 3.5e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF48255 - 2.3e-08 34.7 0.0 3.4e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Amidohydro_1 PF01979.20 ORF48255 - 0.015 14.6 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 Amidohydrolase family MetW PF07021.12 ORF48255 - 0.13 11.9 0.0 0.2 11.2 0.0 1.4 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW TMF_DNA_bd PF12329.8 ORF46053 - 0.00011 22.2 21.2 0.0033 17.4 0.1 2.8 2 1 1 3 3 3 2 TATA element modulatory factor 1 DNA binding GAS PF13851.6 ORF46053 - 0.00028 20.3 21.5 0.055 12.8 5.8 2.5 1 1 1 2 2 2 2 Growth-arrest specific micro-tubule binding bZIP_1 PF00170.21 ORF46053 - 0.0019 18.3 0.1 0.0019 18.3 0.1 3.8 2 1 2 4 4 4 1 bZIP transcription factor CENP-F_leu_zip PF10473.9 ORF46053 - 0.0025 17.9 22.7 0.024 14.7 16.7 2.6 2 1 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GOLGA2L5 PF15070.6 ORF46053 - 0.0087 14.8 14.5 0.0091 14.7 13.0 1.5 1 1 0 1 1 1 1 Putative golgin subfamily A member 2-like protein 5 Shugoshin_N PF07558.11 ORF46053 - 0.015 15.1 3.4 3.3 7.6 0.0 3.5 3 1 0 3 3 3 0 Shugoshin N-terminal coiled-coil region bZIP_2 PF07716.15 ORF46053 - 0.017 15.2 0.1 0.017 15.2 0.1 4.1 2 1 2 4 4 4 0 Basic region leucine zipper PM0188 PF11477.8 ORF46053 - 0.023 13.9 5.2 0.029 13.6 5.2 1.1 1 0 0 1 1 1 0 Sialyltransferase PMO188 Pox_A_type_inc PF04508.12 ORF46053 - 0.086 12.7 0.2 0.086 12.7 0.2 3.0 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat SMC_N PF02463.19 ORF46053 - 0.1 12.0 2.7 0.16 11.4 2.7 1.3 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain GIT_CC PF16559.5 ORF46053 - 0.13 12.2 7.0 2.5 8.0 0.0 3.4 3 0 0 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Vps51 PF08700.11 ORF46053 - 0.14 12.3 10.2 1.4 9.0 4.9 3.0 2 1 0 2 2 2 0 Vps51/Vps67 Spc7 PF08317.11 ORF46053 - 0.14 11.0 19.3 0.15 10.9 15.1 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein DivIC PF04977.15 ORF46053 - 0.22 11.3 0.1 0.22 11.3 0.1 3.7 2 1 2 4 4 4 0 Septum formation initiator TSC22 PF01166.18 ORF46053 - 0.25 11.7 9.6 0.63 10.4 0.1 3.7 3 1 0 3 3 3 0 TSC-22/dip/bun family KASH_CCD PF14662.6 ORF46053 - 0.28 11.0 20.9 0.83 9.5 20.6 1.8 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH ALMT PF11744.8 ORF46053 - 0.78 8.5 6.3 0.92 8.3 6.3 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Rho_Binding PF08912.11 ORF46053 - 0.79 10.6 20.2 0.45 11.4 7.6 3.4 2 1 2 4 4 4 0 Rho Binding NBP1 PF08537.10 ORF46053 - 0.91 8.9 17.2 2.2 7.6 17.2 1.8 1 1 0 1 1 1 0 Fungal Nap binding protein NBP1 Tweety PF04906.13 ORF46053 - 0.99 8.0 3.3 0.91 8.1 1.9 1.6 1 1 1 2 2 2 0 Tweety USP8_interact PF08941.10 ORF46053 - 1.5 8.6 6.7 0.77 9.6 0.1 2.2 1 1 1 2 2 2 0 USP8 interacting EMP24_GP25L PF01105.24 ORF46053 - 2.1 8.2 9.2 5.2 7.0 9.2 1.9 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Exonuc_VII_L PF02601.15 ORF46053 - 2.7 7.5 9.3 3.4 7.2 9.3 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit JIP_LZII PF16471.5 ORF46053 - 8.2 6.7 16.6 2.3 8.5 0.8 3.6 3 0 0 3 3 3 0 JNK-interacting protein leucine zipper II DUF1664 PF07889.12 ORF46053 - 9.7 6.2 10.4 21 5.2 6.6 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) PSS PF03034.15 ORF45153 - 1.5e-27 97.1 2.8 1.9e-27 96.7 2.8 1.1 1 0 0 1 1 1 1 Phosphatidyl serine synthase PseudoU_synth_2 PF00849.22 ORF4490 - 2.7e-17 63.3 0.0 3.2e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase TTL PF03133.15 ORF44515 - 1.6e-08 34.0 2.6 2e-08 33.8 0.1 2.0 2 1 0 2 2 2 1 Tubulin-tyrosine ligase family DNA_pol3_delta2 PF13177.6 ORF44515 - 0.047 13.5 0.8 0.059 13.1 0.8 1.1 1 0 0 1 1 1 0 DNA polymerase III, delta subunit PSS PF03034.15 ORF44472 - 1.5e-27 97.1 2.8 1.9e-27 96.7 2.8 1.1 1 0 0 1 1 1 1 Phosphatidyl serine synthase cobW PF02492.19 ORF42748 - 5.2e-08 32.7 0.6 8.6e-08 32.0 0.5 1.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 ORF42748 - 0.029 14.3 0.3 0.041 13.8 0.3 1.2 1 0 0 1 1 1 0 RsgA GTPase Oxidored_molyb PF00174.19 ORF4154 - 5.3e-16 58.7 0.0 7.7e-16 58.2 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 ORF4154 - 1e-11 45.0 0.0 1.7e-11 44.3 0.0 1.3 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain RRN9 PF10680.9 ORF39081 - 0.33 11.3 2.5 0.45 10.8 0.2 2.2 2 1 1 3 3 3 0 RNA polymerase I specific transcription initiation factor DcuC PF03606.15 ORF37653 - 4.9e-53 180.2 21.6 5.5e-53 180.1 21.6 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier CitMHS PF03600.16 ORF37653 - 3.6e-07 29.7 20.0 4e-07 29.5 20.0 1.0 1 0 0 1 1 1 1 Citrate transporter DctM PF06808.12 ORF37653 - 4.5e-05 22.5 18.0 5.1e-05 22.3 18.0 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component Na_H_antiporter PF03553.14 ORF37653 - 0.00013 21.4 16.1 0.00014 21.2 16.1 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter family MgtE PF01769.16 ORF37653 - 0.0066 16.8 5.3 0.0066 16.8 5.3 2.2 2 0 0 2 2 2 1 Divalent cation transporter Alba PF01918.21 ORF37141 - 1e-15 57.3 0.1 1.4e-15 56.8 0.1 1.2 1 0 0 1 1 1 1 Alba Ycf54 PF10674.9 ORF36120 - 0.12 12.6 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2488) HHH_2 PF12826.7 ORF35795 - 8.5e-25 86.6 3.6 5.5e-24 84.0 0.3 3.0 4 0 0 4 4 4 1 Helix-hairpin-helix motif BRCT PF00533.26 ORF35795 - 4.9e-15 55.7 0.0 8.5e-15 54.9 0.0 1.3 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain HHH_5 PF14520.6 ORF35795 - 3.6e-08 33.9 1.0 2.7e-06 27.9 0.1 2.9 3 1 0 3 3 3 1 Helix-hairpin-helix domain HHH PF00633.23 ORF35795 - 4.4e-07 29.4 1.6 5.4e-06 26.0 0.0 3.2 4 0 0 4 4 4 1 Helix-hairpin-helix motif PTCB-BRCT PF12738.7 ORF35795 - 6.7e-07 29.2 0.0 1.1e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 twin BRCT domain PUA_2 PF14306.6 ORF35795 - 0.015 15.0 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 PUA-like domain 5_3_exonuc PF01367.20 ORF35795 - 0.055 14.1 0.1 0.17 12.5 0.0 1.9 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold Mur_ligase PF01225.25 ORF35795 - 0.11 12.8 0.2 3.5 8.0 0.0 2.4 2 0 0 2 2 2 0 Mur ligase family, catalytic domain DUF2229 PF09989.9 ORF35795 - 0.14 11.8 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) RTT107_BRCT_5 PF16770.5 ORF35795 - 0.2 11.6 0.0 4 7.4 0.0 2.6 2 1 1 3 3 3 0 Regulator of Ty1 transposition protein 107 BRCT domain P_C10 PF14974.6 ORF35328 - 0.00037 20.5 0.0 0.00058 19.9 0.0 1.3 1 0 0 1 1 1 1 Protein C10 DUF1772 PF08592.11 ORF34397 - 0.054 13.8 1.0 0.07 13.4 1.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1772) TraG_N PF07916.11 ORF34397 - 0.072 11.9 0.1 0.11 11.3 0.1 1.3 1 0 0 1 1 1 0 TraG-like protein, N-terminal region Ac76 PF05814.11 ORF34397 - 0.26 11.3 6.2 0.14 12.1 2.8 2.0 2 0 0 2 2 2 0 Orf76 (Ac76) RseC_MucC PF04246.12 ORF34397 - 0.39 10.7 4.4 2.8 7.9 0.4 2.2 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Glyco_hydro_125 PF06824.11 ORF33725 - 0.00072 18.6 1.9 0.00088 18.3 1.9 1.3 1 0 0 1 1 1 1 Metal-independent alpha-mannosidase (GH125) DASH_Spc19 PF08287.11 ORF33725 - 0.5 10.2 12.3 3.6 7.5 10.2 2.3 1 1 1 2 2 2 0 Spc19 DUF4208 PF13907.6 ORF33725 - 0.6 10.6 5.1 3.6 8.1 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4208) DUF16 PF01519.16 ORF33725 - 2.1 8.9 11.1 0.89 10.1 0.2 2.5 2 1 0 2 2 2 0 Protein of unknown function DUF16 DUF1664 PF07889.12 ORF33725 - 3.8 7.6 11.0 1.4 9.0 5.3 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF948 PF06103.11 ORF33725 - 4.7 7.5 7.5 26 5.2 6.3 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Bac_small_YrzI PF09501.10 ORF32458 - 0.052 13.7 1.0 0.1 12.7 1.0 1.5 1 0 0 1 1 1 0 Probable sporulation protein (Bac_small_yrzI) Tetraspanin PF00335.20 ORF32458 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Tetraspanin family Saf_2TM PF18303.1 ORF32458 - 0.13 11.9 0.4 0.21 11.2 0.4 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain Longin PF13774.6 ORF32205 - 1.4e-06 28.3 0.2 2.5e-06 27.4 0.1 1.5 1 1 0 1 1 1 1 Regulated-SNARE-like domain Synaptobrevin PF00957.21 ORF32205 - 0.00074 19.3 5.2 0.00074 19.3 5.2 1.5 2 0 0 2 2 2 1 Synaptobrevin DUF2175 PF09943.9 ORF32205 - 0.13 12.6 4.9 0.86 9.9 4.7 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) Pkinase PF00069.25 ORF31329 - 0.0032 16.9 0.1 0.0093 15.3 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain Patatin PF01734.22 ORF30443 - 8.1e-18 65.3 0.1 1.7e-17 64.3 0.1 1.5 1 1 0 1 1 1 1 Patatin-like phospholipase T6SS_VasJ PF16989.5 ORF30139 - 0.092 12.2 0.1 0.78 9.2 0.0 2.0 1 1 1 2 2 2 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ T6SS_VasJ PF16989.5 ORF30132 - 0.092 12.2 0.1 0.78 9.2 0.0 2.0 1 1 1 2 2 2 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ Cdd1 PF11731.8 ORF30000 - 0.067 13.4 0.2 0.13 12.5 0.2 1.4 1 0 0 1 1 1 0 Pathogenicity locus ECM11 PF15463.6 ORF29870 - 0.031 14.8 2.0 0.042 14.4 0.6 1.9 2 0 0 2 2 2 0 Extracellular mutant protein 11 CDC37_N PF03234.14 ORF29870 - 0.042 14.8 1.6 0.059 14.3 0.3 1.7 1 1 1 2 2 2 0 Cdc37 N terminal kinase binding Med21 PF11221.8 ORF29870 - 0.1 12.8 3.3 0.044 14.0 1.1 1.5 2 0 0 2 2 2 0 Subunit 21 of Mediator complex SR-25 PF10500.9 ORF29556 - 0.066 12.8 9.5 0.083 12.5 9.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 ORF29556 - 3.6 7.9 19.5 4.7 7.5 19.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) TcdB_N PF12918.7 ORF27830 - 0.024 14.9 0.9 0.046 14.0 0.9 1.4 1 0 0 1 1 1 0 TcdB toxin N-terminal helical domain DUF4574 PF15141.6 ORF27830 - 0.13 12.1 0.5 0.24 11.3 0.5 1.4 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 PA26 PF04636.13 ORF27464 - 0.039 12.9 0.0 0.044 12.7 0.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) Tmemb_9 PF05434.11 ORF27464 - 0.1 12.5 0.2 0.15 11.9 0.2 1.3 1 0 0 1 1 1 0 TMEM9 OAD_gamma PF04277.13 ORF27464 - 0.1 13.2 0.0 0.2 12.3 0.0 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain FHA PF00498.26 ORF26688 - 0.019 15.3 0.0 0.045 14.1 0.0 1.6 2 0 0 2 2 2 0 FHA domain Orthopox_F6 PF06601.12 ORF25557 - 0.008 16.3 1.6 0.047 13.8 0.3 2.4 1 1 1 2 2 2 1 Orthopoxvirus F6 protein Cytochrome_B PF00033.19 ORF24374 - 7.8e-34 117.1 13.5 7.8e-34 117.1 13.5 1.4 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 ORF24374 - 7e-05 22.9 4.8 7e-05 22.9 4.8 2.6 2 1 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB Hexapep PF00132.24 ORF2282 - 9.8e-19 66.3 5.0 1.6e-07 30.8 0.5 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF2282 - 4.8e-06 26.2 6.4 0.0034 17.1 0.6 3.7 3 1 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Prot_ATP_OB_N PF17758.1 ORF2282 - 0.05 13.2 0.4 0.39 10.4 0.1 2.1 2 0 0 2 2 2 0 Proteasomal ATPase OB N-terminal domain MIP PF00230.20 ORF22732 - 1e-07 31.9 0.3 1.2e-07 31.7 0.3 1.1 1 0 0 1 1 1 1 Major intrinsic protein zf-C3HC4_3 PF13920.6 ORF20332 - 0.001 18.9 2.9 0.0017 18.2 2.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF20332 - 0.025 14.9 4.0 0.04 14.3 4.0 1.3 1 0 0 1 1 1 0 Ring finger domain zf-RING_4 PF14570.6 ORF20332 - 0.099 12.4 3.3 0.17 11.7 3.3 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DiS_P_DiS PF06750.13 ORF20332 - 0.13 12.4 0.8 0.21 11.7 0.8 1.3 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain zf-RING_5 PF14634.6 ORF20332 - 0.13 12.2 4.6 0.21 11.6 4.6 1.3 1 0 0 1 1 1 0 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF20332 - 0.15 11.9 4.4 0.26 11.2 4.4 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) MORN PF02493.20 ORF20058 - 9.1e-26 88.2 26.0 3.1e-06 26.7 1.7 6.1 5 1 0 5 5 5 5 MORN repeat zf-RING_2 PF13639.6 ORF20046 - 2.9e-08 33.9 2.4 4.4e-08 33.3 2.4 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF20046 - 3.8e-07 29.7 3.6 6.7e-07 28.9 3.6 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF20046 - 0.00018 21.4 1.1 0.00034 20.6 1.1 1.5 1 0 0 1 1 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF20046 - 0.0049 16.5 1.2 0.0077 15.8 1.2 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF20046 - 0.0056 16.8 2.3 0.012 15.8 2.3 1.6 1 0 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 ORF20046 - 0.0063 16.6 2.9 0.012 15.7 2.9 1.5 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4 PF00097.25 ORF20046 - 0.031 14.1 2.0 0.066 13.1 2.0 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF20046 - 0.033 14.1 0.9 0.062 13.3 0.9 1.4 1 0 0 1 1 1 0 zinc-RING finger domain zf-rbx1 PF12678.7 ORF20046 - 0.042 14.1 6.2 0.22 11.9 6.2 2.0 1 1 0 1 1 1 0 RING-H2 zinc finger domain Prok-RING_1 PF14446.6 ORF20046 - 0.05 13.5 0.4 0.1 12.5 0.4 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 ALS2CR11 PF15729.5 ORF20046 - 0.054 12.6 9.2 0.066 12.4 9.2 1.1 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 candidate 11 zf-C3HC4_2 PF13923.6 ORF20046 - 0.074 12.9 2.1 0.13 12.1 2.1 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF20046 - 0.42 10.7 3.9 1.9 8.6 3.9 2.0 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Presenilin PF01080.17 ORF20046 - 3.4 6.3 7.6 4.2 6.0 7.6 1.1 1 0 0 1 1 1 0 Presenilin FUSC PF04632.12 ORF19258 - 0.32 9.5 0.8 0.43 9.0 0.8 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Mito_morph_reg PF14972.6 ORF19040 - 0.093 12.3 0.0 0.21 11.2 0.0 1.5 1 1 0 1 1 1 0 Mitochondrial morphogenesis regulator Cdd1 PF11731.8 ORF19032 - 0.067 13.4 0.2 0.13 12.5 0.2 1.4 1 0 0 1 1 1 0 Pathogenicity locus Ycf54 PF10674.9 ORF1795 - 0.12 12.6 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2488) SR-25 PF10500.9 ORF16025 - 0.066 12.8 9.5 0.083 12.5 9.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 ORF16025 - 3.6 7.9 19.5 4.7 7.5 19.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) SLX9 PF15341.6 ORF14662 - 0.99 9.8 10.2 2.1 8.7 10.3 1.8 1 1 0 1 1 1 0 Ribosome biogenesis protein SLX9 Pro_isomerase PF00160.21 ORF139 - 1.1e-15 58.3 0.0 1.4e-15 58.0 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pkinase PF00069.25 ORF12780 - 0.0032 16.9 0.1 0.0093 15.3 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain DUF4434 PF14488.6 ORF12065 - 0.096 12.7 0.0 2.6 8.0 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4434) MORN PF02493.20 ORF12065 - 2.4 8.2 5.3 0.67 10.0 0.5 2.6 3 0 0 3 3 3 0 MORN repeat Acyl_transf_3 PF01757.22 ORF108189 - 4.5e-09 35.8 21.8 5.7e-09 35.5 21.8 1.2 1 0 0 1 1 1 1 Acyltransferase family CLASP_N PF12348.8 ORF107227 - 1.9e-06 27.6 0.3 9.9e-05 22.0 0.1 2.5 1 1 0 2 2 2 1 CLASP N terminal HEAT PF02985.22 ORF107227 - 5.3e-06 26.2 0.0 0.18 12.1 0.0 3.8 4 0 0 4 4 4 2 HEAT repeat Cnd1 PF12717.7 ORF107227 - 5.5e-05 23.3 0.9 0.01 15.9 0.2 2.2 1 1 1 2 2 2 2 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 ORF107227 - 0.00012 20.8 0.1 0.00015 20.5 0.1 1.1 1 0 0 1 1 1 1 Adaptin N terminal region HEAT_2 PF13646.6 ORF107227 - 0.00075 19.8 0.0 0.0028 18.0 0.0 1.9 2 0 0 2 2 2 1 HEAT repeats DNA_alkylation PF08713.11 ORF107227 - 0.00082 19.1 0.1 0.0088 15.8 0.0 2.1 1 1 1 2 2 2 1 DNA alkylation repair enzyme IFRD PF05004.13 ORF107227 - 0.001 18.3 0.0 0.002 17.3 0.0 1.4 1 1 0 1 1 1 1 Interferon-related developmental regulator (IFRD) IBN_N PF03810.19 ORF107227 - 0.0018 18.1 0.0 0.57 10.1 0.0 2.5 1 1 1 2 2 2 1 Importin-beta N-terminal domain Dopey_N PF04118.14 ORF107227 - 0.0078 15.4 0.0 0.0085 15.2 0.0 1.1 1 0 0 1 1 1 1 Dopey, N-terminal HEAT_EZ PF13513.6 ORF107227 - 0.032 14.7 0.0 0.15 12.6 0.0 2.1 2 0 0 2 2 2 0 HEAT-like repeat Vac14_Fab1_bd PF12755.7 ORF107227 - 0.038 14.6 2.2 6.1 7.5 0.4 2.3 1 1 1 2 2 2 0 Vacuolar 14 Fab1-binding region DUF507 PF04368.13 ORF107227 - 0.054 13.4 2.5 0.1 12.5 0.6 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF507) MA3 PF02847.17 ORF107227 - 0.068 13.1 1.8 2.6 8.0 0.1 2.9 1 1 1 3 3 3 0 MA3 domain zf-LITAF-like PF10601.9 ORF106205 - 5.6e-16 58.6 15.4 8.1e-16 58.1 15.4 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain zinc_ribbon_2 PF13240.6 ORF106205 - 0.074 12.8 5.0 0.31 10.8 0.4 2.7 2 0 0 2 2 2 0 zinc-ribbon domain Sgf11 PF08209.11 ORF106205 - 0.24 11.0 6.0 1 8.9 2.3 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) DUF3700 PF12481.8 ORF105787 - 0.06 12.8 0.0 0.085 12.3 0.0 1.2 1 0 0 1 1 1 0 Aluminium induced protein Cpta_toxin PF07254.12 ORF105577 - 0.11 12.5 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system Cse1 PF08506.10 ORF10488 - 8.7e-07 28.1 0.1 1.1e-06 27.7 0.1 1.2 1 0 0 1 1 1 1 Cse1 DUF4381 PF14316.6 ORF104504 - 0.025 14.8 1.0 0.057 13.7 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) PET117 PF15786.5 ORF104504 - 0.045 14.0 0.1 34 4.8 3.7 2.5 2 1 0 2 2 2 0 PET assembly of cytochrome c oxidase, mitochondrial PsbY PF06298.11 ORF104504 - 0.092 12.7 0.2 0.16 11.9 0.2 1.4 1 0 0 1 1 1 0 Photosystem II protein Y (PsbY) Cytochrome_B PF00033.19 ORF104265 - 7.8e-34 117.1 13.5 7.8e-34 117.1 13.5 1.4 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 ORF104265 - 7e-05 22.9 4.8 7e-05 22.9 4.8 2.6 2 1 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB ABC_transp_aux PF09822.9 ORF103040 - 1.3e-07 31.3 0.2 1.6e-07 31.1 0.2 1.1 1 0 0 1 1 1 1 ABC-type uncharacterized transport system DUF4971 PF16341.5 ORF103040 - 0.11 12.3 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4971) BTB PF00651.31 ORF102425 - 7.1e-20 71.3 0.7 6.6e-18 65.0 0.1 2.3 1 1 1 2 2 2 2 BTB/POZ domain BACK PF07707.15 ORF102425 - 0.023 14.8 0.0 0.062 13.4 0.0 1.7 2 0 0 2 2 2 0 BTB And C-terminal Kelch Gmx_para_CXXCG PF09535.10 NODE_38583_length_547_cov_3.642578_g31240_i0reverse_frame_1 - 0.043 13.1 0.0 0.055 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) Crp PF00325.20 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_1 - 0.017 14.7 6.3 6.7 6.5 0.7 3.3 3 0 0 3 3 3 0 Bacterial regulatory proteins, crp family HTH_1 PF00126.27 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_1 - 0.097 12.6 1.5 32 4.6 0.1 3.1 3 0 0 3 3 3 0 Bacterial regulatory helix-turn-helix protein, lysR family CENP-M PF11111.8 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_1 - 0.2 10.8 3.0 21 4.2 0.1 3.0 2 1 1 3 3 3 0 Centromere protein M (CENP-M) HTH_IclR PF09339.10 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_1 - 0.42 10.4 6.8 11 5.9 0.3 3.2 3 0 0 3 3 3 0 IclR helix-turn-helix domain ALF PF03752.13 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_1 - 0.019 15.0 0.1 6.5 6.8 0.0 3.5 4 0 0 4 4 4 0 Short repeats of unknown function CDC50 PF03381.15 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_1 - 0.067 12.7 0.6 4 6.9 0.0 2.0 2 0 0 2 2 2 0 LEM3 (ligand-effect modulator 3) family / CDC50 family DMPK_coil PF08826.10 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_1 - 0.093 12.9 0.0 44 4.3 0.0 3.7 4 0 0 4 4 4 0 DMPK coiled coil domain like MRF_C1 PF13887.6 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_1 - 3.3 7.0 5.9 71 2.7 0.1 3.3 3 0 0 3 3 3 0 Myelin gene regulatory factor -C-terminal domain 1 Auto_anti-p27 PF06677.12 NODE_38538_length_547_cov_45440.617188_g31200_i0reverse_frame_1 - 1.6 8.9 4.1 2.9 8.1 0.0 2.5 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) UvrD-helicase PF00580.21 NODE_38534_length_548_cov_2.807018_g31196_i0reverse_frame_1 - 4.4e-31 108.6 0.0 5.2e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 NODE_38534_length_548_cov_2.807018_g31196_i0reverse_frame_1 - 3.1e-10 40.6 0.0 4.5e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_38534_length_548_cov_2.807018_g31196_i0reverse_frame_1 - 0.084 12.6 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain Autotransporter PF03797.19 NODE_38533_length_548_cov_2.908382_g31195_i0reverse_frame_1 - 3.6e-09 36.6 11.2 4.5e-09 36.3 11.2 1.1 1 0 0 1 1 1 1 Autotransporter beta-domain DUF4556 PF15094.6 NODE_38533_length_548_cov_2.908382_g31195_i0reverse_frame_1 - 0.23 10.6 0.0 0.33 10.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4556) FAD_syn PF06574.12 NODE_38531_length_548_cov_3.801170_g31193_i0reverse_frame_1 - 2e-40 138.3 0.0 2.4e-40 138.0 0.0 1.1 1 0 0 1 1 1 1 FAD synthetase CTP_transf_like PF01467.26 NODE_38531_length_548_cov_3.801170_g31193_i0reverse_frame_1 - 0.017 15.3 0.0 0.023 14.9 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase-like FixQ PF05545.11 NODE_38526_length_548_cov_4.871345_g31189_i0forward_frame_1 - 4.1 7.5 5.0 18 5.4 0.9 2.4 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ SAPS PF04499.15 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 0.42 9.3 9.2 0.44 9.3 9.2 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF4407 PF14362.6 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 2.3 7.5 8.7 2.8 7.2 8.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AAA_18 PF13238.6 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 3 8.4 8.2 5.8 7.5 6.6 2.2 1 1 1 2 2 2 0 AAA domain DNA_pol_phi PF04931.13 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 4.6 5.2 21.9 6.1 4.8 21.9 1.1 1 0 0 1 1 1 0 DNA polymerase phi RR_TM4-6 PF06459.12 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 9.3 6.0 16.5 2.3 8.0 12.4 1.7 1 1 0 1 1 1 0 Ryanodine Receptor TM 4-6 Autotransporter PF03797.19 NODE_38488_length_549_cov_2.180934_g31153_i0forward_frame_1 - 1.5e-31 110.0 16.8 1.7e-31 109.8 16.8 1.0 1 0 0 1 1 1 1 Autotransporter beta-domain YfaZ PF07437.11 NODE_38488_length_549_cov_2.180934_g31153_i0forward_frame_1 - 0.014 15.1 0.2 0.02 14.5 0.2 1.3 1 0 0 1 1 1 0 YfaZ precursor DUF3575 PF12099.8 NODE_38488_length_549_cov_2.180934_g31153_i0forward_frame_1 - 0.06 12.7 3.7 0.14 11.4 0.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3575) HTH_38 PF13936.6 NODE_38481_length_549_cov_4.334630_g31146_i0forward_frame_1 - 0.15 11.9 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-AD PF07776.15 NODE_38472_length_549_cov_80.729572_g31137_i0reverse_frame_1 - 0.026 14.8 4.1 0.053 13.8 4.1 1.5 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) Laminin_II PF06009.12 NODE_38462_length_549_cov_128.280156_g31128_i0reverse_frame_1 - 0.48 10.4 9.9 0.56 10.2 8.8 1.7 1 1 0 1 1 1 0 Laminin Domain II NPV_P10 PF05531.12 NODE_38462_length_549_cov_128.280156_g31128_i0reverse_frame_1 - 0.98 9.9 8.2 0.23 12.0 2.5 2.3 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Phtf-FEM1B_bdg PF12129.8 NODE_38455_length_549_cov_198.429961_g31122_i0reverse_frame_1 - 0.11 12.4 1.8 1.3 8.8 0.1 2.1 2 0 0 2 2 2 0 Male germ-cell putative homeodomain transcription factor Copper-fist PF00649.18 NODE_38455_length_549_cov_198.429961_g31122_i0forward_frame_1 - 0.1 12.1 0.2 0.1 12.1 0.2 2.8 3 1 0 3 3 3 0 Copper fist DNA binding domain RPN6_C_helix PF18503.1 NODE_38436_length_550_cov_1.848544_g31107_i0reverse_frame_2 - 0.041 13.6 0.1 0.083 12.7 0.1 1.5 1 0 0 1 1 1 0 26S proteasome subunit RPN6 C-terminal helix domain ABC_tran PF00005.27 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 5.2e-34 117.7 0.0 6.1e-34 117.5 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.00014 22.2 0.0 0.00053 20.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.00024 20.9 0.0 0.00028 20.7 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.00024 21.0 0.0 0.00039 20.4 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.00061 19.5 0.0 0.0011 18.7 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.0011 19.4 0.0 0.0013 19.2 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.0011 18.8 0.0 0.0017 18.2 0.0 1.3 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF87 PF01935.17 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.0035 17.4 0.0 0.0046 17.1 0.0 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_23 PF13476.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.0051 17.3 0.0 0.0094 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.01 15.8 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.011 15.9 0.0 0.018 15.2 0.0 1.4 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.02 14.6 0.1 0.039 13.7 0.0 1.5 2 0 0 2 2 1 0 IstB-like ATP binding protein ATP-synt_ab PF00006.25 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.022 14.4 0.0 0.033 13.8 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.023 14.4 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.03 13.8 0.0 0.057 12.9 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.04 13.3 0.0 0.054 12.9 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_10 PF12846.7 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.049 12.5 0.0 0.062 12.2 0.0 1.3 1 1 0 1 1 1 0 AAA-like domain RNA_helicase PF00910.22 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.055 13.9 0.1 0.088 13.2 0.1 1.6 1 1 0 1 1 1 0 RNA helicase DUF2813 PF11398.8 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.077 12.2 0.0 0.15 11.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2813) G-alpha PF00503.20 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.082 12.1 0.0 0.096 11.8 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_18 PF13238.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.095 13.3 0.3 0.71 10.4 0.3 2.0 1 1 1 2 2 2 0 AAA domain AAA_5 PF07728.14 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.11 12.5 0.1 0.19 11.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA PF00004.29 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.15 12.5 0.0 0.31 11.5 0.0 1.6 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.16 10.6 0.0 0.21 10.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain UCR_hinge PF02320.16 NODE_38432_length_550_cov_2.784466_g31103_i0reverse_frame_3 - 0.019 15.1 0.1 0.038 14.2 0.1 1.4 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks113.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks113.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks113.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks113.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FtsX PF02687.21 NODE_38423_length_550_cov_67.448544_g31095_i0reverse_frame_3 - 1.1 9.8 11.8 0.12 12.9 6.0 2.1 2 0 0 2 2 2 0 FtsX-like permease family BAR_3_WASP_bdg PF10456.9 NODE_38418_length_550_cov_85.299029_g31090_i0reverse_frame_3 - 0.19 11.1 0.2 0.29 10.5 0.2 1.2 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein D123 PF07065.14 NODE_38414_length_550_cov_104.815534_g31086_i0forward_frame_3 - 1e-13 51.1 0.0 1.2e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 D123 R2K_3 PF14243.6 NODE_38414_length_550_cov_104.815534_g31086_i0forward_frame_3 - 0.00042 20.4 0.0 0.00055 20.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 3 R2K_2 PF18299.1 NODE_38414_length_550_cov_104.815534_g31086_i0forward_frame_3 - 0.00066 19.6 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 2 Luteo_Vpg PF01659.16 NODE_38410_length_550_cov_141.675728_g31082_i0reverse_frame_2 - 0.19 12.1 4.0 0.2 12.0 2.8 1.6 1 1 0 1 1 1 0 Luteovirus putative VPg genome linked protein ST7 PF04184.12 NODE_38407_length_550_cov_201.891262_g29529_i1reverse_frame_2 - 0.31 9.5 2.3 0.37 9.2 2.3 1.1 1 0 0 1 1 1 0 ST7 protein NPV_P10 PF05531.12 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.069 13.6 1.4 0.21 12.1 1.1 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF507 PF04368.13 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.18 11.7 10.0 0.3 11.0 8.9 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF507) Cid2 PF09774.9 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.41 11.1 6.9 0.18 12.2 4.2 1.7 1 1 0 2 2 2 0 Caffeine-induced death protein 2 ACR_tran PF00873.19 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.45 8.1 4.5 0.49 8.0 4.5 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF1604 PF07713.13 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.45 10.4 2.6 1.2 9.0 2.6 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) Syntaxin_2 PF14523.6 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 2.8 8.4 11.1 1.9 8.9 4.4 2.4 1 1 0 2 2 2 0 Syntaxin-like protein NADHdh_A3 PF14987.6 NODE_38394_length_550_cov_36187.205825_g30537_i7reverse_frame_2 - 0.026 14.8 0.0 0.04 14.2 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 Cas9_PI2 PF18070.1 NODE_38390_length_551_cov_2.517442_g31065_i0reverse_frame_3 - 0.014 16.1 2.8 0.062 14.0 0.3 2.6 2 0 0 2 2 2 0 CRISPR-Cas9 PI domain Pkinase PF00069.25 NODE_38384_length_551_cov_2.994186_g31059_i0reverse_frame_3 - 1.8e-09 37.4 0.1 2.5e-09 36.9 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_38384_length_551_cov_2.994186_g31059_i0reverse_frame_3 - 0.0087 15.4 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Svf1 PF08622.10 NODE_38377_length_551_cov_41.265504_g31053_i0reverse_frame_3 - 0.82 9.7 3.4 2 8.4 3.4 1.6 1 1 0 1 1 1 0 Svf1-like N-terminal lipocalin domain BUD22 PF09073.10 NODE_38374_length_551_cov_59.052326_g31050_i0reverse_frame_3 - 7 5.9 35.3 9.8 5.4 35.3 1.2 1 0 0 1 1 1 0 BUD22 DUF1068 PF06364.12 NODE_38374_length_551_cov_59.052326_g31050_i0forward_frame_2 - 8.4 6.2 11.6 1.7 8.5 8.2 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1068) ZZ PF00569.17 NODE_38368_length_551_cov_91.071705_g31044_i0reverse_frame_3 - 0.011 15.5 0.4 0.11 12.4 0.1 2.6 2 0 0 2 2 2 0 Zinc finger, ZZ type UPF0547 PF10571.9 NODE_38368_length_551_cov_91.071705_g31044_i0reverse_frame_3 - 0.15 12.1 7.8 0.65 10.1 0.2 4.2 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 Ank_4 PF13637.6 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 3e-31 107.4 6.3 3.7e-08 33.7 0.1 4.0 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 1.2e-28 99.6 1.0 3.6e-14 53.1 0.3 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 1.1e-21 76.2 5.2 2.4e-05 24.6 0.1 5.2 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 2.8e-19 67.2 0.5 0.0006 20.1 0.0 5.3 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 5.7e-19 67.9 4.7 1.1e-05 25.7 0.0 4.7 1 1 4 5 5 5 4 Ankyrin repeats (many copies) SRP40_C PF05022.12 NODE_38364_length_551_cov_123.963178_g31040_i0reverse_frame_3 - 0.9 10.4 5.3 1.6 9.7 5.3 1.4 1 0 0 1 1 1 0 SRP40, C-terminal domain NADHdh_A3 PF14987.6 NODE_38340_length_551_cov_36117.063953_g30537_i6reverse_frame_2 - 0.024 14.9 0.0 0.04 14.2 0.0 1.4 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 NADHdh_A3 PF14987.6 NODE_38339_length_551_cov_36117.065891_g30537_i5reverse_frame_2 - 0.024 14.9 0.0 0.04 14.2 0.0 1.4 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 GHL13 PF14883.6 NODE_38335_length_552_cov_2.286267_g31016_i0forward_frame_2 - 1.7e-41 142.4 0.9 2.3e-41 141.9 0.9 1.2 1 0 0 1 1 1 1 Hypothetical glycosyl hydrolase family 13 Polysacc_deac_1 PF01522.21 NODE_38335_length_552_cov_2.286267_g31016_i0forward_frame_2 - 2.2e-08 34.0 0.1 5.4e-08 32.8 0.0 1.6 2 0 0 2 2 2 1 Polysaccharide deacetylase Peptidase_M99 PF17033.5 NODE_38333_length_552_cov_2.531915_g31014_i0reverse_frame_3 - 0.12 11.8 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Carboxypeptidase controlling helical cell shape catalytic Glyco_hydro_8 PF01270.17 NODE_38331_length_552_cov_2.698259_g31012_i0forward_frame_3 - 0.042 12.7 0.0 0.055 12.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 8 HipN PF18253.1 NODE_38331_length_552_cov_2.698259_g31012_i0forward_frame_2 - 0.3 10.8 3.5 1.3 8.7 1.7 2.5 2 1 0 2 2 2 0 Hsp70-interacting protein N N-terminal domain PHM7_cyt PF14703.6 NODE_38329_length_552_cov_2.851064_g31010_i0reverse_frame_3 - 0.0058 16.9 0.1 0.0088 16.3 0.1 1.2 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter Ish1 PF10281.9 NODE_38329_length_552_cov_2.851064_g31010_i0reverse_frame_3 - 0.051 13.9 0.0 0.13 12.6 0.0 1.7 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein BRCT PF00533.26 NODE_38329_length_552_cov_2.851064_g31010_i0reverse_frame_3 - 0.07 13.5 0.1 0.16 12.4 0.1 1.6 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain MFS_1 PF07690.16 NODE_38328_length_552_cov_3.032882_g31009_i0reverse_frame_3 - 1.9e-15 56.7 15.4 2.3e-15 56.4 15.4 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 NODE_38328_length_552_cov_3.032882_g31009_i0reverse_frame_3 - 0.0065 14.8 1.9 0.0076 14.6 1.9 1.1 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family Mtr2 PF10429.9 NODE_38324_length_552_cov_5.785300_g31005_i0reverse_frame_3 - 0.24 11.3 0.0 0.29 11.0 0.0 1.1 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 CvfB_WH PF17783.1 NODE_38322_length_552_cov_44.479691_g31003_i0reverse_frame_3 - 0.0035 17.1 0.0 0.0068 16.2 0.0 1.5 1 0 0 1 1 1 1 CvfB-like winged helix domain Zn_ribbon_17 PF17120.5 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.0002 20.9 0.2 0.0002 20.9 0.2 1.6 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.0003 21.0 0.2 0.0003 21.0 0.2 2.0 2 0 0 2 2 2 1 RING-H2 zinc finger domain PHD PF00628.29 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.0023 17.8 0.4 0.0023 17.8 0.4 2.0 2 1 0 2 2 2 1 PHD-finger zf-RING_2 PF13639.6 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.0033 17.7 0.3 0.0033 17.7 0.3 2.3 2 0 0 2 2 2 1 Ring finger domain C1_1 PF00130.22 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.0082 16.0 0.5 0.0082 16.0 0.5 2.0 2 0 0 2 2 2 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-ANAPC11 PF12861.7 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.056 13.5 0.1 0.056 13.5 0.1 2.5 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger DTW PF03942.15 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.21 11.3 6.5 0.17 11.6 1.1 2.1 2 0 0 2 2 2 0 DTW domain RR_TM4-6 PF06459.12 NODE_38304_length_552_cov_242.928433_g30028_i1reverse_frame_3 - 0.4 10.5 15.1 0.49 10.2 15.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Arf PF00025.21 NODE_38303_length_552_cov_270.464217_g18511_i1reverse_frame_2 - 6.2e-32 110.4 0.0 7.2e-32 110.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 NODE_38303_length_552_cov_270.464217_g18511_i1reverse_frame_2 - 4.4e-06 26.9 0.0 7.4e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 NODE_38303_length_552_cov_270.464217_g18511_i1reverse_frame_2 - 0.00042 19.6 0.0 0.00097 18.4 0.0 1.6 1 1 0 1 1 1 1 G-protein alpha subunit Ras PF00071.22 NODE_38303_length_552_cov_270.464217_g18511_i1reverse_frame_2 - 0.00083 19.0 0.0 0.00099 18.7 0.0 1.2 1 0 0 1 1 1 1 Ras family MMR_HSR1 PF01926.23 NODE_38303_length_552_cov_270.464217_g18511_i1reverse_frame_2 - 0.016 15.3 0.0 0.026 14.6 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 NODE_38303_length_552_cov_270.464217_g18511_i1reverse_frame_2 - 0.023 14.0 0.0 0.028 13.8 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region SRPRB PF09439.10 NODE_38303_length_552_cov_270.464217_g18511_i1reverse_frame_2 - 0.048 13.1 0.0 0.06 12.8 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 NODE_38303_length_552_cov_270.464217_g18511_i1reverse_frame_2 - 0.16 11.5 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain MYEOV2 PF15004.6 NODE_38303_length_552_cov_270.464217_g18511_i1reverse_frame_2 - 0.17 12.3 0.9 0.33 11.4 0.6 1.6 2 0 0 2 2 2 0 Myeloma-overexpressed-like Chromo_2 PF18704.1 NODE_38302_length_552_cov_285.557060_g30986_i0reverse_frame_3 - 0.14 12.4 0.8 0.23 11.8 0.8 1.4 1 0 0 1 1 1 0 Chromatin organization modifier domain 2 DUF1512 PF07431.12 NODE_38302_length_552_cov_285.557060_g30986_i0reverse_frame_2 - 1.7 7.6 4.8 0.56 9.1 1.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1512) Glyco_hydro_65C PF03633.15 NODE_38299_length_552_cov_29770.663443_g30592_i4reverse_frame_3 - 0.6 10.1 1.7 2.2 8.3 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain NADHdh_A3 PF14987.6 NODE_38298_length_552_cov_36047.206963_g30537_i4reverse_frame_2 - 0.027 14.8 0.0 0.04 14.2 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 CDC48_2 PF02933.17 ORF99075 - 5.4e-05 22.9 0.0 0.059 13.2 0.0 2.5 2 1 0 2 2 2 2 Cell division protein 48 (CDC48), domain 2 Homeobox_KN PF05920.11 ORF98428 - 2.7e-12 46.4 0.8 4.7e-12 45.6 0.8 1.4 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF98428 - 2.8e-06 27.1 0.4 6.8e-06 25.8 0.4 1.7 1 0 0 1 1 1 1 Homeodomain Mfa_like_2 PF15415.6 ORF96249 - 0.039 12.9 0.0 0.049 12.5 0.0 1.2 1 0 0 1 1 1 0 Fimbrillin-like Pro_isomerase PF00160.21 ORF95375 - 1.7e-41 142.2 0.3 1.9e-41 141.9 0.3 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JAB PF01398.21 ORF94937 - 6.2e-26 90.7 0.2 8.9e-26 90.2 0.2 1.3 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 ORF94937 - 5.6e-05 22.9 0.0 7.3e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain MitMem_reg PF13012.6 ORF94937 - 0.0039 17.6 0.0 0.007 16.8 0.0 1.4 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function LamB PF02264.15 ORF94007 - 1.9e-51 176.1 10.6 2.1e-51 176.0 10.6 1.0 1 0 0 1 1 1 1 LamB porin Acyl_CoA_thio PF02551.15 ORF93420 - 6.5e-52 174.9 0.0 8.2e-52 174.5 0.0 1.1 1 0 0 1 1 1 1 Acyl-CoA thioesterase 4HBT_3 PF13622.6 ORF93420 - 2.5e-29 103.3 0.1 2.8e-29 103.1 0.1 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.22 ORF93420 - 0.0023 18.2 0.0 0.0038 17.6 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily PDGLE PF13190.6 ORF92938 - 0.016 15.1 0.0 0.03 14.2 0.0 1.6 1 0 0 1 1 1 0 PDGLE domain PDZ_6 PF17820.1 ORF92850 - 0.008 16.0 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 PDZ domain Glycos_transf_1 PF00534.20 ORF92018 - 1.5e-07 31.1 0.0 2.9e-07 30.2 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF92018 - 3.5e-07 30.7 0.0 4.7e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Cyt-b5 PF00173.28 ORF91936 - 0.052 13.7 0.0 0.4 10.9 0.0 2.1 2 0 0 2 2 2 0 Cytochrome b5-like Heme/Steroid binding domain ShK PF01549.24 ORF91936 - 0.44 11.1 31.0 0.077 13.5 3.5 4.8 3 2 0 3 3 3 0 ShK domain-like PRK PF00485.18 ORF87993 - 7.5e-25 87.8 1.3 9.2e-25 87.5 1.3 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 ORF87993 - 0.0056 17.2 0.1 0.0091 16.5 0.1 1.4 1 1 0 1 1 1 1 AAA domain ThiS-like PF14453.6 ORF87993 - 0.041 13.9 0.2 0.94 9.6 0.1 2.6 2 0 0 2 2 2 0 ThiS-like ubiquitin US6 PF17616.2 ORF87993 - 0.14 12.1 0.0 0.22 11.5 0.0 1.3 1 1 0 1 1 1 0 Viral unique short region 6 DeoRC PF00455.22 ORF87956 - 7.6e-38 130.0 0.0 8.8e-38 129.8 0.0 1.0 1 0 0 1 1 1 1 DeoR C terminal sensor domain TAT_signal PF10518.9 ORF87933 - 0.022 14.6 0.9 0.022 14.6 0.9 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 ORF87933 - 0.1 12.0 0.2 0.21 11.0 0.2 1.5 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Cyt-b5 PF00173.28 ORF85017 - 0.052 13.7 0.0 0.4 10.9 0.0 2.1 2 0 0 2 2 2 0 Cytochrome b5-like Heme/Steroid binding domain ShK PF01549.24 ORF85017 - 0.44 11.1 31.0 0.077 13.5 3.5 4.8 3 2 0 3 3 3 0 ShK domain-like Knl1_RWD_C PF18210.1 ORF84119 - 0.0024 18.3 0.2 0.0041 17.6 0.2 1.4 1 0 0 1 1 1 1 Knl1 RWD C-terminal domain DUF3557 PF12078.8 ORF83103 - 0.084 12.8 0.7 3.7 7.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3557) Pkinase PF00069.25 ORF81026 - 0.00018 21.0 0.2 0.00089 18.7 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF81026 - 0.02 14.2 0.3 0.073 12.3 0.0 1.8 2 0 0 2 2 2 0 Protein tyrosine kinase PAP1 PF08601.10 ORF80799 - 2.4 7.8 10.9 3.2 7.4 10.9 1.2 1 0 0 1 1 1 0 Transcription factor PAP1 HATPase_c PF02518.26 ORF80457 - 6.7e-08 33.0 0.0 1e-07 32.5 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF80457 - 0.00029 20.7 0.0 0.00038 20.3 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMPK1_CBM PF16561.5 ORF79691 - 2.1e-18 66.3 0.0 3.4e-18 65.6 0.0 1.4 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase AMPKBI PF04739.15 ORF79691 - 1.4e-07 31.6 0.3 3.9e-07 30.3 0.2 1.7 1 1 0 1 1 1 1 5'-AMP-activated protein kinase beta subunit, interaction domain Cas_Cas4 PF01930.17 ORF79497 - 0.11 12.5 0.1 0.2 11.8 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function DUF83 Imp-YgjV PF10688.9 ORF7829 - 2e-57 193.4 13.6 2.3e-57 193.3 13.6 1.0 1 0 0 1 1 1 1 Bacterial inner membrane protein YfhO PF09586.10 ORF7829 - 6.9 4.8 7.0 7.3 4.7 7.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Pkinase PF00069.25 ORF78149 - 0.00018 21.0 0.2 0.00089 18.7 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78149 - 0.02 14.2 0.3 0.073 12.3 0.0 1.8 2 0 0 2 2 2 0 Protein tyrosine kinase Med3 PF11593.8 ORF76630 - 0.0029 16.8 1.5 0.0037 16.5 1.5 1.1 1 0 0 1 1 1 1 Mediator complex subunit 3 fungal Apolipoprotein PF01442.18 ORF76630 - 0.0044 16.9 0.9 0.01 15.7 0.3 1.9 2 1 0 2 2 2 1 Apolipoprotein A1/A4/E domain MCPsignal PF00015.21 ORF76630 - 0.0063 16.3 1.2 0.035 13.9 0.0 2.0 1 1 1 2 2 2 1 Methyl-accepting chemotaxis protein (MCP) signalling domain YlbD_coat PF14071.6 ORF76630 - 0.0082 16.4 3.0 0.85 9.9 0.7 2.2 1 1 1 2 2 2 2 Putative coat protein 7tm_6 PF02949.20 ORF76630 - 0.011 14.8 0.0 0.016 14.3 0.0 1.2 1 0 0 1 1 1 0 7tm Odorant receptor Ead_Ea22 PF13935.6 ORF76630 - 0.012 16.3 1.0 0.019 15.7 1.0 1.4 1 1 0 1 1 1 0 Ead/Ea22-like protein Lipoprotein_2 PF00921.17 ORF76630 - 0.013 15.1 4.3 0.013 15.1 4.3 1.9 1 1 0 1 1 1 0 Borrelia lipoprotein AAA_23 PF13476.6 ORF76630 - 0.021 15.3 5.0 0.026 15.1 5.0 1.1 1 0 0 1 1 1 0 AAA domain DUF1804 PF08822.11 ORF76630 - 0.044 13.8 3.8 0.39 10.7 0.4 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1804) DUF2935 PF11155.8 ORF76630 - 0.049 14.0 1.5 0.97 9.8 0.4 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF2935) AI-2E_transport PF01594.16 ORF76630 - 0.12 11.5 0.0 0.33 10.1 0.0 1.7 1 1 0 2 2 2 0 AI-2E family transporter Cauli_AT PF03233.13 ORF76630 - 0.18 11.7 4.0 0.25 11.3 3.0 1.8 1 1 1 2 2 2 0 Aphid transmission protein GARP PF16731.5 ORF76630 - 0.26 11.0 12.0 0.067 12.9 5.4 2.3 2 1 0 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma DUF4164 PF13747.6 ORF76630 - 0.37 11.1 4.8 1.1 9.5 0.3 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) YjfB_motility PF14070.6 ORF76630 - 0.55 10.4 4.6 15 5.8 1.5 2.5 2 0 0 2 2 2 0 Putative motility protein YtxH PF12732.7 ORF76630 - 0.85 10.2 10.5 3.1 8.4 5.8 2.8 2 2 0 2 2 2 0 YtxH-like protein NPV_P10 PF05531.12 ORF76630 - 1.1 9.8 4.8 34 5.0 0.1 3.0 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein CREPT PF16566.5 ORF76630 - 2.9 8.1 7.4 2.1 8.5 1.7 2.3 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour PDZ_6 PF17820.1 ORF71540 - 0.008 16.0 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 PDZ domain Mitochondr_Som1 PF11093.8 ORF68729 - 0.095 12.7 0.2 0.15 12.1 0.2 1.4 1 1 0 1 1 1 0 Mitochondrial export protein Som1 DUF4210 PF13915.6 ORF68729 - 0.19 12.3 0.0 0.36 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) CPSF_A PF03178.15 ORF67225 - 2.4e-20 73.1 0.0 2.7e-20 72.9 0.0 1.0 1 0 0 1 1 1 1 CPSF A subunit region ESP PF16590.5 ORF65766 - 0.85 9.9 10.7 0.24 11.7 4.3 2.2 2 0 0 2 2 2 0 Exocrine gland-secreting peptide Hema_stalk PF08720.10 ORF65254 - 0.18 11.5 0.1 0.37 10.5 0.1 1.5 1 1 0 1 1 1 0 Influenza C hemagglutinin stalk L31 PF09784.9 ORF65254 - 0.74 10.3 8.5 7.9 7.0 8.5 2.1 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L31 FHA PF00498.26 ORF64155 - 2.9e-13 49.9 0.0 6.7e-13 48.8 0.0 1.6 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF64155 - 2.2e-07 31.1 0.0 2e-06 28.0 0.0 2.1 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain PfkB PF00294.24 ORF63028 - 2.7e-29 102.5 0.0 3.1e-29 102.2 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Acetyltransf_10 PF13673.7 ORF630 - 3e-11 43.3 0.0 4.5e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF630 - 3.9e-09 36.8 0.0 5.1e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF630 - 4e-08 33.6 0.0 5.8e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF630 - 0.0002 21.2 0.0 0.00039 20.3 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 ORF630 - 0.012 15.3 0.0 0.018 14.7 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_15 PF17013.5 ORF630 - 0.13 11.7 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative acetyl-transferase Nitroreductase PF00881.24 ORF61303 - 5e-27 95.0 0.1 5.7e-27 94.8 0.1 1.0 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 ORF61303 - 0.0016 18.1 0.0 1.1 8.7 0.0 2.1 2 0 0 2 2 2 2 Putative TM nitroreductase Lipase_3 PF01764.25 ORF60187 - 1.8e-06 27.9 0.1 5.6e-06 26.3 0.0 1.7 1 1 1 2 2 2 1 Lipase (class 3) Abhydrolase_3 PF07859.13 ORF60187 - 6.4e-05 22.9 0.0 7.8e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF60187 - 7.5e-05 23.0 0.0 0.00013 22.1 0.0 1.4 1 0 0 1 1 1 1 Thioesterase domain DUF2974 PF11187.8 ORF60187 - 0.00051 19.7 0.0 0.00066 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_5 PF12695.7 ORF60187 - 0.00098 18.9 0.0 0.0013 18.5 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.7 ORF60187 - 0.0064 17.1 0.1 0.015 15.9 0.1 1.6 1 1 1 2 2 2 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF60187 - 0.0068 15.9 0.0 0.0087 15.6 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family PGAP1 PF07819.13 ORF60187 - 0.013 15.2 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein Chlorophyllase2 PF12740.7 ORF60187 - 0.02 13.8 0.0 0.024 13.6 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme DLH PF01738.18 ORF60187 - 0.021 14.4 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Dienelactone hydrolase family Hydrolase_4 PF12146.8 ORF60187 - 0.021 14.1 0.0 0.024 13.9 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Chlorophyllase PF07224.11 ORF60187 - 0.071 12.1 0.0 0.096 11.7 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase Abhydrolase_1 PF00561.20 ORF60187 - 0.13 11.9 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold SpoIIE PF07228.12 ORF59795 - 0.00028 20.8 0.0 0.00053 20.0 0.0 1.5 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Pkinase PF00069.25 ORF59766 - 8.1e-07 28.7 0.1 2.1e-06 27.3 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain HATPase_c PF02518.26 ORF58203 - 1.3e-09 38.5 0.0 1.7e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF58203 - 0.033 14.0 0.0 0.048 13.5 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF58203 - 0.074 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain PDZ_6 PF17820.1 ORF57915 - 0.008 16.0 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 PDZ domain Methyltransf_PK PF05891.12 ORF5791 - 5.4e-29 101.3 0.0 7.2e-29 100.9 0.0 1.1 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Methyltransf_25 PF13649.6 ORF5791 - 3.4e-14 53.3 0.0 1.1e-13 51.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF5791 - 1.5e-11 44.8 0.0 3.6e-11 43.5 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF5791 - 2.8e-10 40.2 0.0 2.9e-10 40.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF5791 - 8.4e-10 39.3 0.0 1.3e-09 38.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF5791 - 4.9e-05 23.2 0.0 6.9e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 ORF5791 - 7.1e-05 22.2 0.0 8.8e-05 21.9 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain MTS PF05175.14 ORF5791 - 0.00026 20.6 0.0 0.00034 20.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Rsm22 PF09243.10 ORF5791 - 0.0011 18.3 0.0 0.0016 17.7 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 TehB PF03848.14 ORF5791 - 0.0031 16.9 0.0 0.0043 16.5 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB CheR PF01739.18 ORF5791 - 0.0069 15.9 0.0 0.01 15.4 0.0 1.3 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain Ubie_methyltran PF01209.18 ORF5791 - 0.016 14.6 0.0 0.02 14.2 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family MIT_C PF16565.5 ORF56821 - 0.014 15.4 2.1 0.014 15.4 2.1 2.3 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT Jnk-SapK_ap_N PF09744.9 ORF56821 - 0.068 13.4 22.9 0.43 10.8 13.1 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 TSC22 PF01166.18 ORF56821 - 0.27 11.6 15.8 4.7 7.6 0.3 4.2 2 1 1 3 3 3 0 TSC-22/dip/bun family ApoO PF09769.9 ORF56821 - 0.93 9.5 5.7 18 5.3 4.0 3.0 1 1 1 2 2 2 0 Apolipoprotein O FapA PF03961.13 ORF56821 - 2.1 6.8 26.9 0.43 9.1 7.9 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A TPR_MLP1_2 PF07926.12 ORF56821 - 2.2 8.3 20.7 1.5 8.9 10.6 2.7 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein GTP-bdg_M PF16360.5 ORF56821 - 2.4 8.8 8.7 3.3 8.4 0.1 3.3 2 1 1 3 3 3 0 GTP-binding GTPase Middle Region DUF883 PF05957.13 ORF56821 - 2.4 8.8 4.9 1.9 9.1 1.5 2.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) PAPS_reduct PF01507.19 ORF56821 - 5.6 7.0 11.8 3.4 7.7 4.6 2.4 1 1 2 3 3 3 0 Phosphoadenosine phosphosulfate reductase family DUF4140 PF13600.6 ORF56821 - 6.6 7.2 10.8 0.88 10.1 0.8 3.0 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) CorA PF01544.18 ORF56821 - 7.1 5.8 8.5 2.5 7.3 3.5 2.1 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein AFP_2 PF18815.1 ORF55449 - 0.048 13.9 0.9 0.048 13.9 0.9 2.2 2 0 0 2 2 2 0 Bacterial antifreeze protein repeat DUF5415 PF17436.2 ORF55247 - 0.11 12.6 0.9 0.29 11.2 0.1 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5415) Peptidase_S46 PF10459.9 ORF55247 - 0.15 10.7 6.6 0.17 10.5 6.6 1.0 1 0 0 1 1 1 0 Peptidase S46 HTH_37 PF13744.6 ORF55247 - 0.18 11.8 0.1 0.18 11.8 0.1 2.4 2 2 1 3 3 3 0 Helix-turn-helix domain Cob_adeno_trans PF01923.18 ORF55247 - 0.34 11.1 7.1 0.42 10.7 7.1 1.3 1 0 0 1 1 1 0 Cobalamin adenosyltransferase GAS PF13851.6 ORF55247 - 0.7 9.2 6.7 0.6 9.4 2.1 2.3 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Amidase_2 PF01510.25 ORF549 - 1.5e-26 93.3 0.0 1.8e-26 93.1 0.0 1.1 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase MIT_C PF16565.5 ORF53683 - 0.014 15.4 2.1 0.014 15.4 2.1 2.3 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT Jnk-SapK_ap_N PF09744.9 ORF53683 - 0.068 13.4 22.9 0.43 10.8 13.1 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 TSC22 PF01166.18 ORF53683 - 0.27 11.6 15.8 4.7 7.6 0.3 4.2 2 1 1 3 3 3 0 TSC-22/dip/bun family ApoO PF09769.9 ORF53683 - 0.93 9.5 5.7 18 5.3 4.0 3.0 1 1 1 2 2 2 0 Apolipoprotein O FapA PF03961.13 ORF53683 - 2.1 6.8 26.9 0.43 9.1 7.9 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A TPR_MLP1_2 PF07926.12 ORF53683 - 2.2 8.3 20.7 1.5 8.9 10.6 2.7 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein GTP-bdg_M PF16360.5 ORF53683 - 2.4 8.8 8.7 3.3 8.4 0.1 3.3 2 1 1 3 3 3 0 GTP-binding GTPase Middle Region DUF883 PF05957.13 ORF53683 - 2.4 8.8 4.9 1.9 9.1 1.5 2.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) PAPS_reduct PF01507.19 ORF53683 - 5.6 7.0 11.8 3.4 7.7 4.6 2.4 1 1 2 3 3 3 0 Phosphoadenosine phosphosulfate reductase family DUF4140 PF13600.6 ORF53683 - 6.6 7.2 10.8 0.88 10.1 0.8 3.0 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) CorA PF01544.18 ORF53683 - 7.1 5.8 8.5 2.5 7.3 3.5 2.1 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein CitX PF03802.14 ORF53659 - 3.6e-53 179.7 0.0 4e-53 179.5 0.0 1.0 1 0 0 1 1 1 1 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase KH_1 PF00013.29 ORF52264 - 0.012 15.5 0.0 0.03 14.2 0.0 1.6 1 0 0 1 1 1 0 KH domain EF-hand_1 PF00036.32 ORF52007 - 6.9e-21 72.2 10.9 4.7e-05 22.6 0.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF52007 - 4.8e-18 63.5 12.2 1e-05 25.0 0.1 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF52007 - 1.4e-16 60.7 10.0 5.8e-08 33.1 0.6 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF52007 - 2e-15 55.5 9.7 0.00097 18.5 0.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF52007 - 1.3e-08 34.5 15.2 1.9e-07 30.8 0.5 4.1 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF52007 - 0.0002 21.6 0.3 0.5 10.7 0.0 2.8 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF52007 - 0.045 13.9 3.7 8.6 6.6 1.4 3.2 2 1 1 3 3 3 0 Dockerin type I domain EF-hand_4 PF12763.7 ORF52007 - 0.046 13.7 0.4 0.15 12.0 0.5 1.9 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF52007 - 0.56 10.1 5.1 28 4.6 0.0 3.7 2 1 2 4 4 4 0 Caleosin related protein Connexin PF00029.19 ORF51290 - 0.031 14.0 0.1 0.061 13.1 0.0 1.4 1 1 0 1 1 1 0 Connexin Zip PF02535.22 ORF51290 - 0.037 13.3 0.1 0.043 13.0 0.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter bZIP_1 PF00170.21 ORF5067 - 0.0001 22.3 7.2 0.0001 22.3 7.2 1.7 1 1 0 1 1 1 1 bZIP transcription factor KLRAQ PF10205.9 ORF5067 - 0.0014 18.8 11.4 0.003 17.7 1.7 2.3 1 1 1 2 2 2 2 Predicted coiled-coil domain-containing protein bZIP_2 PF07716.15 ORF5067 - 0.25 11.4 8.8 0.1 12.7 5.8 1.9 1 1 0 1 1 1 0 Basic region leucine zipper CHMI PF02962.15 ORF50404 - 0.042 14.2 0.1 0.29 11.5 0.0 2.0 2 0 0 2 2 2 0 5-carboxymethyl-2-hydroxymuconate isomerase TPR_15 PF13429.6 ORF50404 - 0.058 12.6 0.6 0.085 12.1 0.6 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat LMBR1 PF04791.16 ORF50404 - 2.5 6.9 6.8 4.3 6.1 6.8 1.5 1 1 0 1 1 1 0 LMBR1-like membrane protein F-box PF00646.33 ORF50218 - 0.00082 19.2 0.1 0.0018 18.1 0.1 1.6 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 ORF50218 - 0.01 15.7 0.3 0.019 14.9 0.3 1.4 1 0 0 1 1 1 0 F-box-like DUF3557 PF12078.8 ORF50009 - 0.084 12.8 0.7 3.7 7.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3557) PDZ_6 PF17820.1 ORF4993 - 0.008 16.0 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 PDZ domain BTB PF00651.31 ORF48741 - 1.1e-22 80.4 2.7 7e-22 77.8 0.7 2.1 1 1 1 2 2 2 2 BTB/POZ domain Kelch_2 PF07646.15 ORF48478 - 0.079 13.0 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Kelch motif PDGLE PF13190.6 ORF47433 - 0.016 15.1 0.0 0.03 14.2 0.0 1.6 1 0 0 1 1 1 0 PDGLE domain HTH_Tnp_Tc3_2 PF01498.18 ORF47070 - 6.1e-08 32.8 1.0 1.6e-07 31.4 1.0 1.8 1 0 0 1 1 1 1 Transposase HTH_38 PF13936.6 ORF47070 - 2.5e-07 30.3 0.6 2e-06 27.5 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 ORF47070 - 0.00037 20.3 1.9 0.011 15.6 0.0 2.8 3 0 0 3 3 3 1 MarR family DUF1400 PF07176.11 ORF47070 - 0.0035 17.6 0.9 0.0054 17.0 0.9 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1400) 2OG-Fe_Oxy_2 PF10014.9 ORF47070 - 0.017 15.0 0.1 1.3 8.8 0.0 2.1 2 0 0 2 2 2 0 2OG-Fe dioxygenase Sigma70_r1_2 PF00140.20 ORF47070 - 0.039 14.0 0.2 3.1 7.9 0.0 2.5 2 0 0 2 2 2 0 Sigma-70 factor, region 1.2 MarR PF01047.22 ORF47070 - 0.077 12.9 0.2 0.22 11.5 0.0 1.9 2 0 0 2 2 2 0 MarR family HTH_37 PF13744.6 ORF47070 - 0.14 12.1 1.3 1.2 9.1 0.9 2.4 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_32 PF13565.6 ORF47070 - 0.38 11.4 5.5 4.7 7.9 1.5 3.3 1 1 1 2 2 2 0 Homeodomain-like domain UPF0370 PF13980.6 ORF46745 - 0.17 12.0 0.2 3.2 7.9 0.0 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0370) TetR_C_19 PF17924.1 ORF45591 - 0.045 14.4 1.4 0.045 14.4 1.4 1.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Acetyltransf_10 PF13673.7 ORF4558 - 3e-11 43.3 0.0 4.5e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF4558 - 3.9e-09 36.8 0.0 5.1e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF4558 - 4e-08 33.6 0.0 5.8e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF4558 - 0.0002 21.2 0.0 0.00039 20.3 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 ORF4558 - 0.012 15.3 0.0 0.018 14.7 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_15 PF17013.5 ORF4558 - 0.13 11.7 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative acetyl-transferase Etmic-2 PF06670.11 ORF45155 - 0.13 11.2 0.0 0.16 10.9 0.0 1.1 1 0 0 1 1 1 0 Microneme protein Etmic-2 RimM PF01782.18 ORF43334 - 4.1e-27 94.2 0.0 6.2e-27 93.6 0.0 1.3 1 0 0 1 1 1 1 RimM N-terminal domain PRC PF05239.16 ORF43334 - 1.2e-09 38.1 0.7 1.9e-09 37.5 0.7 1.3 1 0 0 1 1 1 1 PRC-barrel domain Mac PF12464.8 ORF42562 - 2.5e-16 59.7 0.2 3.5e-16 59.2 0.2 1.2 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep_2 PF14602.6 ORF42562 - 1.9e-15 56.3 12.5 4.3e-11 42.4 5.0 3.1 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 ORF42562 - 2.1e-13 49.4 15.2 7.6e-11 41.3 7.3 3.2 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) nec1 PF10379.9 ORF42562 - 0.024 14.2 0.0 0.044 13.3 0.0 1.4 1 0 0 1 1 1 0 Virulence protein nec1 Apolipoprotein PF01442.18 ORF41918 - 0.0085 16.0 2.1 0.013 15.3 2.1 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain TPR_MLP1_2 PF07926.12 ORF41918 - 0.015 15.4 0.5 0.024 14.7 0.5 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein TolA_bind_tri PF16331.5 ORF41918 - 0.021 14.9 1.3 0.044 13.9 1.3 1.5 1 0 0 1 1 1 0 TolA binding protein trimerisation IKBKB_SDD PF18397.1 ORF41918 - 0.032 13.5 0.1 0.047 13.0 0.1 1.2 1 0 0 1 1 1 0 IQBAL scaffold dimerization domain COMP PF11598.8 ORF41918 - 0.034 14.6 2.6 3 8.4 0.0 2.2 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein HIP1_clath_bdg PF16515.5 ORF41918 - 0.11 13.2 2.7 0.21 12.2 2.6 1.6 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 PhaP_Bmeg PF09602.10 ORF41918 - 0.13 12.2 0.5 0.19 11.6 0.5 1.2 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) PDZ_6 PF17820.1 ORF40308 - 0.0082 16.0 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 PDZ domain Med25_NR-box PF11244.8 ORF40308 - 2.4 8.6 8.6 1.5 9.2 5.2 2.1 2 0 0 2 2 2 0 Mediator complex subunit 25 C-terminal NR box-containing Voldacs PF03517.13 ORF39328 - 4e-23 82.1 0.2 4e-23 82.1 0.2 2.1 1 1 1 2 2 2 1 Regulator of volume decrease after cellular swelling MFS_1_like PF12832.7 ORF38010 - 1.3e-24 86.8 8.5 1.7e-24 86.4 8.5 1.2 1 0 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 ORF38010 - 2.4e-08 33.3 19.2 3e-06 26.4 6.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily UNC-93 PF05978.16 ORF38010 - 3.7e-05 23.5 1.9 3.7e-05 23.5 1.9 1.4 1 1 0 1 1 1 1 Ion channel regulatory protein UNC-93 Nuc_H_symport PF03825.16 ORF38010 - 0.0001 21.4 6.3 0.00011 21.3 6.3 1.2 1 0 0 1 1 1 1 Nucleoside H+ symporter OATP PF03137.20 ORF38010 - 0.01 14.2 1.4 0.01 14.2 1.4 1.8 1 1 1 2 2 2 1 Organic Anion Transporter Polypeptide (OATP) family DUF1129 PF06570.11 ORF38010 - 0.048 13.2 0.7 0.1 12.1 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) LacY_symp PF01306.19 ORF38010 - 0.22 10.3 7.1 0.66 8.7 7.1 1.7 1 1 0 1 1 1 0 LacY proton/sugar symporter Patched PF02460.18 ORF38010 - 4.2 5.3 6.6 0.6 8.1 0.2 2.0 2 0 0 2 2 2 0 Patched family FtsX_ECD PF18075.1 ORF37511 - 0.012 16.2 0.2 0.02 15.5 0.2 1.3 1 0 0 1 1 1 0 FtsX extracellular domain UCH PF00443.29 ORF36642 - 0.43 10.0 3.6 0.33 10.4 1.9 1.6 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase Wzz PF02706.15 ORF36505 - 0.07 13.4 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 Chain length determinant protein CBS PF00571.28 ORF35943 - 0.0023 18.3 0.2 0.0068 16.8 0.0 1.8 2 0 0 2 2 2 1 CBS domain DUF261 PF03196.13 ORF34528 - 0.06 13.5 0.1 0.082 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF261 CobD_Cbib PF03186.13 ORF34528 - 0.065 12.4 0.1 0.087 12.0 0.1 1.1 1 0 0 1 1 1 0 CobD/Cbib protein DASH_Ask1 PF08655.10 ORF34528 - 0.2 11.6 2.3 0.64 9.9 0.2 2.4 2 1 0 2 2 2 0 DASH complex subunit Ask1 Thiolase_N PF00108.23 ORF34147 - 0.00082 18.8 1.8 0.014 14.7 0.6 2.7 2 1 0 2 2 2 1 Thiolase, N-terminal domain Kinesin PF00225.23 ORF3408 - 5.2e-31 107.8 0.6 6.4e-31 107.5 0.6 1.0 1 0 0 1 1 1 1 Kinesin motor domain DUF3363 PF11843.8 ORF33896 - 0.035 13.1 0.1 0.04 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3363) Pribosyltran PF00156.27 ORF31559 - 1.9e-15 56.7 0.0 2.3e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF31559 - 0.0016 17.9 0.0 0.002 17.6 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 ORF31559 - 0.092 12.2 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase DUF2318 PF10080.9 ORF30728 - 0.031 14.4 0.4 0.049 13.8 0.4 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) Secretin_N_2 PF07655.13 ORF2948 - 1.5 9.4 13.6 0.28 11.8 5.0 2.2 2 0 0 2 2 2 0 Secretin N-terminal domain COQ7 PF03232.13 ORF2948 - 3.2 7.5 10.3 0.78 9.5 5.2 2.2 1 1 1 2 2 2 0 Ubiquinone biosynthesis protein COQ7 DUF4758 PF15950.5 ORF2948 - 4.3 7.7 7.9 1.8 8.9 5.1 1.7 1 1 1 2 2 2 0 Putative sperm flagellar membrane protein DUF4407 PF14362.6 ORF2948 - 8.8 5.6 16.7 10 5.4 16.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Ank_4 PF13637.6 ORF28910 - 6.8e-11 42.5 0.2 7e-06 26.5 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF28910 - 9.9e-09 35.3 0.3 1.8e-08 34.5 0.3 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF28910 - 9e-08 32.2 0.0 2.2e-07 31.0 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeat Ank_2 PF12796.7 ORF28910 - 1.1e-07 32.3 0.0 1.6e-07 31.8 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF28910 - 1.5e-05 24.9 0.1 7.2e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat NUDIX PF00293.28 ORF28601 - 1.1e-21 77.3 0.1 1.5e-21 76.8 0.1 1.2 1 0 0 1 1 1 1 NUDIX domain HEPN_Cthe2314 PF18730.1 ORF28368 - 0.0079 16.3 2.0 0.0079 16.3 2.0 1.7 2 0 0 2 2 2 1 Cthe_2314-like HEPN DUF3456 PF11938.8 ORF28368 - 0.076 13.5 0.6 0.11 13.0 0.6 1.3 1 0 0 1 1 1 0 TLR4 regulator and MIR-interacting MSAP SinI PF08671.10 ORF28368 - 1.5 8.7 5.5 1.7 8.5 0.0 2.7 3 0 0 3 3 3 0 Anti-repressor SinI zinc-ribbons_6 PF07191.12 ORF26297 - 0.02 14.9 0.4 0.041 13.9 0.4 1.5 1 0 0 1 1 1 0 zinc-ribbons Stc1 PF12898.7 ORF26297 - 0.026 15.1 0.3 0.055 14.0 0.3 1.5 1 0 0 1 1 1 0 Stc1 domain TIMELESS PF04821.14 ORF26297 - 0.052 12.8 0.0 0.076 12.3 0.0 1.2 1 0 0 1 1 1 0 Timeless protein zf-MYND PF01753.18 ORF26297 - 0.36 11.0 2.8 2 8.5 2.8 2.1 1 1 0 1 1 1 0 MYND finger zf-C6H2 PF15801.5 ORF26297 - 0.65 10.3 4.1 15 6.0 0.2 2.5 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding zf-WRNIP1_ubi PF18279.1 ORF26297 - 7.4 7.5 9.9 2.6 8.9 3.1 2.5 2 0 0 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain DHQ_synthase PF01761.20 ORF25365 - 2.5e-37 128.5 0.1 3e-37 128.2 0.1 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Spectrin PF00435.21 ORF25245 - 0.1 13.1 4.2 0.16 12.4 0.5 2.5 2 1 0 3 3 3 0 Spectrin repeat DASH_Spc19 PF08287.11 ORF25245 - 0.98 9.3 11.2 4.8 7.0 4.2 2.2 2 0 0 2 2 2 0 Spc19 Peptidase_S49_N PF08496.10 ORF25245 - 9.7 6.2 9.0 3.3 7.8 5.9 1.8 2 0 0 2 2 2 0 Peptidase family S49 N-terminal MORN PF02493.20 ORF22741 - 3.6e-20 70.6 23.5 6.2e-07 28.9 1.1 5.1 5 0 0 5 5 5 4 MORN repeat DUF3048_C PF17479.2 ORF22741 - 0.0074 16.7 2.5 0.13 12.6 2.5 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3048) C-terminal domain EMP24_GP25L PF01105.24 ORF21567 - 3.2e-13 50.0 0.4 3.7e-13 49.8 0.4 1.1 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD DUF4363 PF14276.6 ORF21567 - 0.046 13.8 0.8 0.1 12.7 0.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4363) DUF615 PF04751.14 ORF21425 - 3.6e-55 186.2 9.0 4.1e-55 186.0 9.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF615) EntA_Immun PF08951.10 ORF21425 - 0.00087 19.6 1.4 0.017 15.5 0.1 2.6 1 1 0 2 2 2 1 Enterocin A Immunity DUF982 PF06169.12 ORF21425 - 0.036 14.1 0.0 0.14 12.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF982) YAcAr PF10686.9 ORF21425 - 0.13 12.2 0.0 0.29 11.1 0.0 1.6 1 0 0 1 1 1 0 YspA, cpYpsA-related SLOG family Myc_target_1 PF15179.6 ORF21106 - 0.0038 17.2 1.9 0.2 11.5 0.0 2.1 1 1 1 2 2 2 1 Myc target protein 1 SCF PF02404.15 ORF21106 - 0.01 15.2 0.1 0.013 14.9 0.1 1.2 1 0 0 1 1 1 0 Stem cell factor Zip PF02535.22 ORF21106 - 0.012 14.9 0.1 0.014 14.6 0.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Amnionless PF14828.6 ORF21106 - 0.016 14.1 0.0 0.019 13.8 0.0 1.0 1 0 0 1 1 1 0 Amnionless FixS PF03597.15 ORF21106 - 0.039 13.7 1.6 0.058 13.1 1.6 1.2 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type COX4 PF02936.14 ORF21106 - 0.09 12.8 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV OSTbeta PF15048.6 ORF21106 - 0.24 11.5 2.5 2.3 8.4 0.0 2.4 2 0 0 2 2 2 0 Organic solute transporter subunit beta protein PetM PF08041.11 ORF21106 - 0.43 10.2 3.0 0.7 9.5 3.0 1.2 1 0 0 1 1 1 0 PetM family of cytochrome b6f complex subunit 7 Rad51 PF08423.11 ORF21071 - 1.7e-05 24.3 0.1 1.9e-05 24.1 0.1 1.1 1 0 0 1 1 1 1 Rad51 Acetyltransf_1 PF00583.25 ORF18836 - 4.7e-13 49.4 0.0 6.3e-13 49.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF18836 - 2.9e-10 40.1 0.0 3.8e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF18836 - 4e-09 36.8 0.0 6.7e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF18836 - 5.6e-08 32.6 0.0 8.8e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF18836 - 0.002 18.3 0.0 0.0034 17.5 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF18836 - 0.013 15.5 0.0 0.023 14.8 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain TPH PF13868.6 ORF18359 - 1.1e-28 99.8 65.4 1.2e-28 99.7 65.4 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF4286 PF14114.6 ORF18359 - 0.027 14.9 3.3 0.049 14.1 2.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4286) tRNA_U5-meth_tr PF05958.11 ORF18359 - 0.36 9.8 9.4 0.47 9.4 9.4 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Gluconate_2-dh3 PF13618.6 ORF17923 - 0.061 13.6 0.1 1.1 9.5 0.0 2.1 2 0 0 2 2 2 0 Gluconate 2-dehydrogenase subunit 3 SK_channel PF03530.14 ORF17923 - 0.065 13.2 4.5 0.23 11.5 3.3 2.0 1 1 1 2 2 2 0 Calcium-activated SK potassium channel Acetyltransf_1 PF00583.25 ORF17137 - 4.7e-13 49.4 0.0 6.3e-13 49.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF17137 - 2.9e-10 40.1 0.0 3.8e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF17137 - 4e-09 36.8 0.0 6.7e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF17137 - 5.6e-08 32.6 0.0 8.8e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF17137 - 0.002 18.3 0.0 0.0034 17.5 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF17137 - 0.013 15.5 0.0 0.023 14.8 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain GST_C PF00043.25 ORF16169 - 1.6e-07 31.4 0.0 3.1e-07 30.5 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF16169 - 2.1e-05 24.6 0.1 4.7e-05 23.5 0.1 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF16169 - 0.0017 18.4 0.0 0.0053 16.8 0.0 2.0 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF16169 - 0.0084 15.5 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 1 AIG1 family TMP-TENI PF02581.17 ORF16169 - 0.043 13.1 0.0 0.062 12.6 0.0 1.2 1 0 0 1 1 1 0 Thiamine monophosphate synthase ART PF01129.18 ORF12005 - 0.002 17.5 0.0 0.0033 16.7 0.0 1.3 1 1 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase Mito_carr PF00153.27 ORF11789 - 4.2e-17 61.8 0.4 3.6e-10 39.6 0.0 2.4 2 1 0 2 2 2 2 Mitochondrial carrier protein MIT_C PF16565.5 ORF111869 - 0.014 15.4 2.1 0.014 15.4 2.1 2.3 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT Jnk-SapK_ap_N PF09744.9 ORF111869 - 0.068 13.4 22.9 0.43 10.8 13.1 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 TSC22 PF01166.18 ORF111869 - 0.27 11.6 15.8 4.7 7.6 0.3 4.2 2 1 1 3 3 3 0 TSC-22/dip/bun family ApoO PF09769.9 ORF111869 - 0.93 9.5 5.7 18 5.3 4.0 3.0 1 1 1 2 2 2 0 Apolipoprotein O FapA PF03961.13 ORF111869 - 2.1 6.8 26.9 0.43 9.1 7.9 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A TPR_MLP1_2 PF07926.12 ORF111869 - 2.2 8.3 20.7 1.5 8.9 10.6 2.7 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein GTP-bdg_M PF16360.5 ORF111869 - 2.4 8.8 8.7 3.3 8.4 0.1 3.3 2 1 1 3 3 3 0 GTP-binding GTPase Middle Region DUF883 PF05957.13 ORF111869 - 2.4 8.8 4.9 1.9 9.1 1.5 2.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) PAPS_reduct PF01507.19 ORF111869 - 5.6 7.0 11.8 3.4 7.7 4.6 2.4 1 1 2 3 3 3 0 Phosphoadenosine phosphosulfate reductase family DUF4140 PF13600.6 ORF111869 - 6.6 7.2 10.8 0.88 10.1 0.8 3.0 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) CorA PF01544.18 ORF111869 - 7.1 5.8 8.5 2.5 7.3 3.5 2.1 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein SpoIIE PF07228.12 ORF110021 - 0.00028 20.8 0.0 0.00053 20.0 0.0 1.5 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Mito_carr PF00153.27 ORF109909 - 4.2e-17 61.8 0.4 3.6e-10 39.6 0.0 2.4 2 1 0 2 2 2 2 Mitochondrial carrier protein Cluap1 PF10234.9 ORF109166 - 8.9e-28 97.4 12.4 8.9e-28 97.4 12.4 1.8 1 1 1 2 2 2 1 Clusterin-associated protein-1 Lebercilin PF15619.6 ORF109166 - 0.0016 18.1 15.0 0.0024 17.6 15.0 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF3584 PF12128.8 ORF109166 - 0.035 11.7 9.9 0.037 11.6 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF932 PF06067.11 ORF109166 - 0.063 13.0 1.2 0.085 12.6 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF932) DUF745 PF05335.13 ORF109166 - 0.092 12.5 0.3 0.092 12.5 0.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Exonuc_VII_L PF02601.15 ORF109166 - 0.22 11.1 4.9 0.25 10.9 4.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3086 PF11285.8 ORF109166 - 0.64 9.1 7.0 0.78 8.8 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) TMF_TATA_bd PF12325.8 ORF109166 - 1 9.6 15.8 0.5 10.6 5.0 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Fzo_mitofusin PF04799.13 ORF109166 - 1.8 8.1 7.1 0.18 11.4 1.8 1.8 2 0 0 2 2 2 0 fzo-like conserved region RasGAP_C PF03836.15 ORF109166 - 2.5 8.2 13.9 4.9 7.3 13.7 1.7 1 1 0 1 1 1 0 RasGAP C-terminus DUF1664 PF07889.12 ORF109166 - 2.7 8.1 6.6 0.48 10.5 1.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF109166 - 9.2 6.6 23.0 4.1e+02 1.3 23.1 2.1 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) PBP PF01161.20 ORF108785 - 2e-36 125.2 0.0 2.5e-36 124.9 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Defensin_propep PF00879.18 ORF108785 - 0.031 14.6 0.0 0.048 13.9 0.0 1.3 1 0 0 1 1 1 0 Defensin propeptide SIP1 PF04938.12 ORF107350 - 0.021 14.5 1.9 0.042 13.6 0.5 2.0 1 1 1 3 3 3 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) Gluconate_2-dh3 PF13618.6 ORF107350 - 0.091 13.0 0.1 0.13 12.5 0.1 1.5 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 DUF1018 PF06252.12 ORF107350 - 0.13 13.3 1.0 0.33 11.9 1.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1018) Raco_middle PF17651.1 ORF106106 - 0.15 11.7 0.3 0.2 11.4 0.3 1.2 1 0 0 1 1 1 0 RACo middle region RCC1_2 PF13540.6 ORF105727 - 6.7e-14 51.3 1.0 0.0032 17.2 0.0 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF105727 - 1.2e-05 25.5 0.4 9.9 6.2 0.0 4.0 3 1 1 4 4 4 4 Uncharacterised ACR, YagE family COG1723 DUF359 PF04019.12 ORF105727 - 1.9e-05 24.3 0.0 0.99 9.1 0.0 3.7 4 0 0 4 4 4 3 Protein of unknown function (DUF359) Rib PF08428.10 ORF105727 - 0.66 10.0 3.3 3.8 7.6 0.1 3.2 2 2 1 3 3 3 0 Rib/alpha-like repeat SLATT_4 PF18186.1 ORF104727 - 0.97 9.0 3.2 1.6 8.4 3.2 1.3 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 PseudoU_synth_2 PF00849.22 ORF102989 - 2.8e-05 24.3 0.0 3.7e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF3557 PF12078.8 ORF102983 - 0.084 12.8 0.7 3.7 7.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3557) Pterin_4a PF01329.19 ORF102864 - 2.2e-13 50.2 0.6 3.3e-13 49.6 0.6 1.3 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase GSHPx PF00255.19 ORF102477 - 4.5e-47 158.1 0.0 5.6e-47 157.8 0.0 1.1 1 0 0 1 1 1 1 Glutathione peroxidase Redoxin PF08534.10 ORF102477 - 0.0051 16.5 0.0 0.14 11.8 0.0 2.1 2 0 0 2 2 2 1 Redoxin DUF2254 PF10011.9 NODE_38734_length_544_cov_3.017682_g31382_i0forward_frame_1 - 2 7.2 5.1 3 6.6 5.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DPM3 PF08285.11 NODE_38734_length_544_cov_3.017682_g31382_i0forward_frame_1 - 2.5 8.3 7.4 0.63 10.3 3.3 2.0 2 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) GBP_C PF02841.14 NODE_38731_length_544_cov_4.227898_g31379_i0forward_frame_1 - 0.089 12.2 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain Gp58 PF07902.11 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.0053 15.1 1.3 0.0067 14.8 1.3 1.2 1 0 0 1 1 1 1 gp58-like protein DASH_Hsk3 PF08227.11 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.013 15.8 0.2 0.26 11.7 0.1 2.4 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like DUF2407_C PF13373.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.02 15.0 0.5 0.034 14.3 0.5 1.2 1 0 0 1 1 1 0 DUF2407 C-terminal domain Apolipoprotein PF01442.18 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.022 14.6 8.6 0.043 13.7 8.6 1.5 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain NPV_P10 PF05531.12 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.035 14.6 2.6 0.32 11.5 2.6 2.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Exonuc_VII_L PF02601.15 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.051 13.2 10.9 0.064 12.8 10.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit PKcGMP_CC PF16808.5 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.093 12.6 9.3 2.9 7.8 0.1 3.7 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF3584 PF12128.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.2 9.1 15.4 0.24 8.9 15.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) CENP-Q PF13094.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.22 11.7 13.7 0.2 11.9 12.3 1.5 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Phage_Mu_Gam PF07352.12 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.4 10.6 11.6 0.066 13.1 7.4 1.7 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein FlaC_arch PF05377.11 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.41 11.1 9.1 2.4 8.6 1.8 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DASH_Dam1 PF08653.10 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.55 10.1 2.3 1.8 8.4 0.6 2.4 1 1 2 3 3 2 0 DASH complex subunit Dam1 TMF_DNA_bd PF12329.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.55 10.3 21.6 0.036 14.1 13.1 2.5 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Atg14 PF10186.9 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.57 9.2 12.2 0.78 8.8 12.2 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FliS PF02561.14 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.62 10.3 5.6 2.1 8.7 3.2 2.3 1 1 1 2 2 2 0 Flagellar protein FliS DUF489 PF04356.12 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.71 9.9 5.4 2.7 8.0 5.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF489) DUF1664 PF07889.12 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.74 9.9 7.0 0.29 11.2 1.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FlxA PF14282.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.76 9.8 14.7 0.72 9.9 7.2 2.4 1 1 2 3 3 3 0 FlxA-like protein End3 PF12761.7 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 1.2 9.2 14.8 0.68 10.1 4.3 2.0 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 V_ATPase_I PF01496.19 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 1.3 6.9 10.3 1.6 6.5 10.3 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fib_alpha PF08702.10 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 2.1 8.5 14.0 4.4 7.5 1.7 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family LMBR1 PF04791.16 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 2.1 7.2 8.2 2.6 6.8 8.2 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF3552 PF12072.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 2.6 7.4 19.4 1.9 7.8 18.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF3450 PF11932.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 3.1 7.0 11.7 5.7 6.2 11.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4407 PF14362.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 3.2 7.0 13.1 6.2 6.1 13.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 5.3 6.2 14.9 2.7 7.1 6.8 1.8 1 1 1 2 2 2 0 TMPIT-like protein AATF-Che1 PF13339.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 6.8 7.4 13.5 11 6.7 12.0 1.8 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor Tho2 PF11262.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 9.5 5.3 18.9 4.2 6.5 8.2 2.0 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 YEATS PF03366.16 NODE_38706_length_544_cov_131.703340_g31355_i0forward_frame_1 - 4.2e-17 61.9 2.9 4.2e-17 61.9 2.9 1.7 2 0 0 2 2 2 1 YEATS family Imm51 PF15595.6 NODE_38706_length_544_cov_131.703340_g31355_i0forward_frame_1 - 0.041 13.8 0.2 0.1 12.5 0.1 1.7 1 1 0 1 1 1 0 Immunity protein 51 Ax_dynein_light PF10211.9 NODE_38704_length_544_cov_131.744597_g31353_i0reverse_frame_1 - 2.7 7.9 10.7 1.3 8.9 6.4 2.0 1 1 1 2 2 2 0 Axonemal dynein light chain Trp_leader2 PF08056.11 NODE_38699_length_544_cov_182.650295_g31349_i0forward_frame_1 - 0.068 13.2 1.7 0.14 12.1 1.7 1.4 1 0 0 1 1 1 0 Tryptophan operon leader peptide DUF3981 PF13139.6 NODE_38683_length_544_cov_30238.571709_g30592_i5reverse_frame_1 - 0.00084 19.7 0.3 0.0013 19.1 0.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3981) Mem_trans PF03547.18 NODE_38682_length_545_cov_1.688235_g31334_i0reverse_frame_1 - 1.2e-32 112.8 5.6 1.2e-30 106.3 0.7 2.0 1 1 1 2 2 2 2 Membrane transport protein ABC2_membrane_5 PF13346.6 NODE_38682_length_545_cov_1.688235_g31334_i0reverse_frame_1 - 1 8.8 7.9 2.7 7.5 0.2 2.5 3 0 0 3 3 3 0 ABC-2 family transporter protein Secretin_N_2 PF07655.13 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_1 - 0.71 10.4 14.2 24 5.6 11.7 2.3 2 0 0 2 2 2 0 Secretin N-terminal domain SR-25 PF10500.9 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_1 - 4.1 6.9 21.9 6.1 6.4 21.9 1.3 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HSA PF07529.13 NODE_38671_length_545_cov_40.123529_g31323_i0reverse_frame_1 - 0.0057 17.0 3.4 1.4 9.3 1.0 2.9 3 0 0 3 3 3 2 HSA Apocytochr_F_N PF16639.5 NODE_38638_length_545_cov_491.419608_g31291_i0reverse_frame_1 - 4.1e-38 131.1 0.1 6e-38 130.6 0.1 1.3 1 0 0 1 1 1 1 Apocytochrome F, N-terminal YecR PF13992.6 NODE_38638_length_545_cov_491.419608_g31291_i0forward_frame_1 - 0.22 11.9 1.7 0.29 11.5 1.7 1.3 1 0 0 1 1 1 0 YecR-like lipoprotein Cys_rich_CPXG PF14255.6 NODE_38636_length_545_cov_2073.013725_g31290_i0reverse_frame_1 - 0.049 13.5 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 Cysteine-rich CPXCG PCSK9_C1 PF18459.1 NODE_38636_length_545_cov_2073.013725_g31290_i0reverse_frame_1 - 0.18 12.0 0.4 0.18 12.0 0.4 2.0 2 0 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Mem_trans PF03547.18 NODE_38635_length_545_cov_8444.762745_g31289_i0forward_frame_1 - 1.6e-05 23.5 8.4 2.5e-05 22.9 4.7 2.0 1 1 1 2 2 2 2 Membrane transport protein Tektin PF03148.14 NODE_38602_length_546_cov_173.790607_g31259_i0forward_frame_1 - 2.7e-07 29.7 7.1 3.2e-07 29.5 7.1 1.2 1 0 0 1 1 1 1 Tektin family DUF1843 PF08898.10 NODE_38592_length_546_cov_496.248532_g31249_i0forward_frame_1 - 0.006 17.1 0.1 0.012 16.1 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1843) RuvB_C PF05491.13 NODE_38592_length_546_cov_496.248532_g31249_i0forward_frame_1 - 0.0067 16.3 0.6 0.0067 16.3 0.6 2.5 2 1 1 3 3 3 1 RuvB C-terminal winged helix domain DUF5542 PF17696.1 NODE_38588_length_546_cov_4910.722114_g31245_i0reverse_frame_1 - 2.6 8.2 0.0 2.6 8.2 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5542) Apocytochr_F_C PF01333.19 NODE_38588_length_546_cov_4910.722114_g31245_i0forward_frame_1 - 2.4e-35 121.1 0.1 3.4e-35 120.6 0.1 1.2 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF5006 PF16397.5 NODE_38588_length_546_cov_4910.722114_g31245_i0forward_frame_1 - 0.0003 20.1 0.1 0.00044 19.5 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5006) RnfC_N PF13375.6 NODE_38588_length_546_cov_4910.722114_g31245_i0forward_frame_1 - 0.073 13.0 0.3 2.9 7.9 0.1 2.3 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain Phage_holin_3_1 PF05106.12 NODE_38588_length_546_cov_4910.722114_g31245_i0forward_frame_1 - 0.1 13.0 0.5 0.16 12.4 0.5 1.3 1 0 0 1 1 1 0 Phage holin family (Lysis protein S) Elf-1_N PF12310.8 NODE_38587_length_546_cov_6722.594912_g31244_i0reverse_frame_1 - 0.069 13.7 0.0 0.096 13.2 0.0 1.3 1 0 0 1 1 1 0 Transcription factor protein N terminal DUF3108 PF11306.8 NODE_38587_length_546_cov_6722.594912_g31244_i0reverse_frame_1 - 0.077 13.0 0.0 0.094 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3108) CENP-M PF11111.8 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_3 - 0.0023 17.2 0.8 1.4 8.1 0.0 3.0 3 0 0 3 3 3 2 Centromere protein M (CENP-M) CARD_2 PF16739.5 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_3 - 0.0098 15.9 0.0 7.3 6.7 0.0 2.9 3 0 0 3 3 3 2 Caspase recruitment domain HTH_IclR PF09339.10 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_3 - 0.24 11.2 7.0 1.8 8.4 0.0 3.6 3 1 1 4 4 4 0 IclR helix-turn-helix domain AbiEi_4 PF13338.6 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_2 - 0.4 10.9 4.5 29 4.9 0.1 3.2 3 0 0 3 3 3 0 Transcriptional regulator, AbiEi antitoxin ALF PF03752.13 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_3 - 0.064 13.2 0.1 15 5.7 0.0 2.5 2 0 0 2 2 2 0 Short repeats of unknown function P19Arf_N PF07392.12 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_3 - 0.1 13.0 0.2 1.7 9.2 0.1 2.5 2 0 0 2 2 2 0 Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus Bowman-Birk_leg PF00228.20 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_3 - 0.27 11.7 1.1 30 5.2 0.0 3.3 3 0 0 3 3 3 0 Bowman-Birk serine protease inhibitor family ALF PF03752.13 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_2 - 0.035 14.1 0.3 4.8 7.2 0.0 3.4 4 0 0 4 4 4 0 Short repeats of unknown function P19Arf_N PF07392.12 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_2 - 0.23 12.0 6.9 9.7 6.7 0.4 3.4 3 0 0 3 3 3 0 Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus DAN PF03045.15 NODE_38577_length_547_cov_20.300781_g31234_i0reverse_frame_3 - 0.01 15.9 0.8 0.018 15.1 0.8 1.5 1 0 0 1 1 1 0 DAN domain PP2C PF00481.21 NODE_38553_length_547_cov_260.707031_g31212_i0reverse_frame_2 - 4.4e-17 62.6 0.0 7.1e-17 61.9 0.0 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C Carbam_trans_N PF02543.15 NODE_38546_length_547_cov_503.835938_g31206_i0forward_frame_3 - 0.08 12.6 0.1 0.1 12.2 0.1 1.1 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus PB1 PF00564.24 NODE_38540_length_547_cov_6886.662109_g31202_i0forward_frame_3 - 1.1e-07 31.7 0.2 1.7e-07 31.1 0.2 1.3 1 0 0 1 1 1 1 PB1 domain DUF2574 PF10836.8 NODE_38534_length_548_cov_2.807018_g31196_i0forward_frame_3 - 0.059 13.2 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) Trypan_PARP PF05887.11 NODE_38533_length_548_cov_2.908382_g31195_i0reverse_frame_2 - 1.5 8.8 7.3 2.4 8.1 7.3 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Flavin_Reduct PF01613.18 NODE_38533_length_548_cov_2.908382_g31195_i0forward_frame_3 - 0.096 12.7 0.4 0.13 12.3 0.4 1.2 1 0 0 1 1 1 0 Flavin reductase like domain Serglycin PF04360.12 NODE_38533_length_548_cov_2.908382_g31195_i0forward_frame_3 - 0.45 10.4 6.0 0.7 9.8 6.0 1.3 1 0 0 1 1 1 0 Serglycin DUF2575 PF10837.8 NODE_38531_length_548_cov_3.801170_g31193_i0reverse_frame_3 - 6.5e-35 119.3 1.9 1.1e-34 118.5 1.9 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2575) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks114.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks114.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks114.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks114.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:48:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AMP-binding_C PF13193.6 NODE_38520_length_548_cov_63.808967_g31183_i0forward_frame_3 - 8.2e-19 68.4 0.1 1.2e-18 67.8 0.1 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 NODE_38520_length_548_cov_63.808967_g31183_i0forward_frame_3 - 2.8e-09 36.1 0.1 3.9e-09 35.6 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme PH_BEACH PF14844.6 NODE_38491_length_548_cov_37549.317739_g31156_i0reverse_frame_3 - 1.1e-06 28.7 0.4 2e-06 27.8 0.4 1.5 1 0 0 1 1 1 1 PH domain associated with Beige/BEACH DUF3974 PF13120.6 NODE_38487_length_549_cov_2.258755_g31152_i0forward_frame_3 - 0.085 13.0 0.4 0.13 12.4 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) ETF PF01012.21 NODE_38485_length_549_cov_3.206226_g31150_i0forward_frame_3 - 3.1e-29 102.2 1.1 3.8e-29 101.9 1.1 1.0 1 0 0 1 1 1 1 Electron transfer flavoprotein domain MFS_1 PF07690.16 NODE_38482_length_549_cov_4.249027_g31147_i0reverse_frame_2 - 3e-15 56.0 6.2 3.5e-15 55.8 6.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily BTB PF00651.31 NODE_38479_length_549_cov_53.972763_g31144_i0forward_frame_3 - 0.017 15.3 0.1 0.026 14.7 0.1 1.3 1 0 0 1 1 1 0 BTB/POZ domain DUF3916 PF13079.6 NODE_38479_length_549_cov_53.972763_g31144_i0forward_frame_3 - 2 8.3 8.5 9.3 6.1 0.6 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF3916) TssO PF17561.2 NODE_38465_length_549_cov_111.058366_g31131_i0reverse_frame_2 - 0.042 14.0 1.0 0.042 14.0 1.0 2.4 2 1 0 2 2 2 0 Type VI secretion system, TssO TPPII_N PF12583.8 NODE_38465_length_549_cov_111.058366_g31131_i0reverse_frame_2 - 0.13 12.8 0.2 0.4 11.3 0.0 1.8 1 1 1 2 2 2 0 Tripeptidyl peptidase II N terminal BH3 PF15285.6 NODE_38459_length_549_cov_151.856031_g31126_i0reverse_frame_3 - 0.16 11.7 0.6 2.9 7.8 0.1 2.5 2 0 0 2 2 2 0 Beclin-1 BH3 domain, Bcl-2-interacting DarA_C PF18789.1 NODE_38459_length_549_cov_151.856031_g31126_i0reverse_frame_2 - 0.2 12.0 0.0 0.33 11.3 0.0 1.4 1 0 0 1 1 1 0 Defence against restriction A C-terminal Herpes_pp85 PF04637.12 NODE_38459_length_549_cov_151.856031_g31126_i0reverse_frame_2 - 8.5 4.7 5.6 11 4.3 5.6 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) zf-CCCH PF00642.24 NODE_38459_length_549_cov_151.856031_g31126_i0forward_frame_3 - 1.4 8.9 5.8 6.1 6.9 0.3 2.8 3 0 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Planc_extracel PF07595.12 NODE_38459_length_549_cov_151.856031_g31126_i0forward_frame_2 - 3.8 7.5 7.6 0.2 11.5 1.2 2.2 2 0 0 2 2 2 0 Planctomycete extracellular Ion_trans PF00520.31 NODE_38455_length_549_cov_198.429961_g31122_i0forward_frame_2 - 4.1e-07 29.5 10.5 5.1e-07 29.2 10.5 1.1 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 NODE_38455_length_549_cov_198.429961_g31122_i0forward_frame_2 - 0.022 14.6 7.9 0.013 15.4 5.5 1.8 2 1 0 2 2 2 0 Ligand-gated ion channel DUF4750 PF15938.5 NODE_38455_length_549_cov_198.429961_g31122_i0forward_frame_2 - 5.7 6.7 9.9 0.36 10.5 3.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) NB PF04159.13 NODE_38454_length_549_cov_220.309339_g31121_i0reverse_frame_3 - 0.32 11.1 5.9 0.069 13.2 2.3 1.8 2 0 0 2 2 2 0 NB glycoprotein RR_TM4-6 PF06459.12 NODE_38451_length_549_cov_244.359922_g30028_i2reverse_frame_3 - 0.021 14.6 11.2 0.024 14.5 11.2 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Mem_trans PF03547.18 NODE_38451_length_549_cov_244.359922_g30028_i2reverse_frame_3 - 3.5 5.9 4.1 3.8 5.8 4.1 1.2 1 0 0 1 1 1 0 Membrane transport protein DUF3903 PF13043.6 ORF99785 - 0.66 9.8 3.9 2.1 8.2 1.3 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3903) DHHC PF01529.20 ORF96324 - 0.027 14.6 3.9 0.042 13.9 3.9 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Lig_chan PF00060.26 ORF96324 - 0.062 13.1 1.0 0.11 12.3 0.9 1.4 1 1 0 1 1 1 0 Ligand-gated ion channel DUF2614 PF11023.8 ORF96324 - 1 9.5 4.1 0.3 11.2 0.3 1.8 2 0 0 2 2 2 0 Zinc-ribbon containing domain Glyco_hydro_16 PF00722.21 ORF94093 - 0.00013 21.5 0.4 0.00022 20.8 0.4 1.6 1 1 0 1 1 1 1 Glycosyl hydrolases family 16 Ank_4 PF13637.6 ORF94073 - 6.9e-07 29.7 0.1 0.00044 20.8 0.1 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF94073 - 2.1e-06 28.2 0.1 0.0085 16.7 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF94073 - 6.7e-06 26.3 0.0 1.5e-05 25.1 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF94073 - 0.00014 22.1 0.1 1.4 9.5 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF94073 - 0.2 12.3 0.2 9.6 7.2 0.0 3.2 3 1 1 4 4 4 0 Ankyrin repeat DUF3903 PF13043.6 ORF94017 - 0.66 9.8 3.9 2.1 8.2 1.3 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3903) 2OG-FeII_Oxy_3 PF13640.6 ORF93435 - 2.9e-16 60.1 0.3 4.6e-16 59.5 0.3 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily ABC_membrane PF00664.23 ORF9288 - 1.3e-18 67.6 12.9 1.4e-18 67.5 12.9 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Tetraspanin PF00335.20 ORF9288 - 0.0014 18.4 4.2 0.0017 18.1 4.2 1.2 1 0 0 1 1 1 1 Tetraspanin family DUF1449 PF07290.11 ORF9288 - 0.075 12.7 3.0 0.13 11.9 3.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1449) DUP PF00674.18 ORF9288 - 0.097 12.8 0.4 0.097 12.8 0.4 2.2 1 1 2 3 3 3 0 DUP family FUSC-like PF12805.7 ORF9288 - 0.28 10.2 6.8 0.44 9.6 6.8 1.4 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS RseC_MucC PF04246.12 ORF9288 - 0.3 11.0 2.3 0.44 10.5 2.3 1.3 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC PIG-P PF08510.12 ORF9288 - 1.1 9.1 6.4 2.8 7.9 6.4 1.6 1 1 0 1 1 1 0 PIG-P TMEM220 PF15071.6 ORF9288 - 5.2 7.9 7.2 1.6 9.5 4.1 1.9 2 1 0 2 2 2 0 Transmembrane family 220, helix Lipase_3 PF01764.25 ORF91925 - 2.8e-28 98.6 0.0 3.6e-28 98.2 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Peptidase_S9 PF00326.21 ORF91925 - 0.0064 16.0 0.0 0.0084 15.6 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family PGAP1 PF07819.13 ORF91925 - 0.0089 15.8 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 1 PGAP1-like protein DUF676 PF05057.14 ORF91925 - 0.011 15.2 0.1 0.019 14.5 0.1 1.4 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 ORF91925 - 0.028 13.7 0.0 0.044 13.0 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 UCR_TM PF02921.14 ORF91925 - 0.2 12.1 0.7 0.53 10.8 0.0 2.1 3 0 0 3 3 3 0 Ubiquinol cytochrome reductase transmembrane region DEC-1_N PF04625.13 ORF9079 - 0.086 11.8 1.1 0.1 11.6 1.1 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Methyltransf_4 PF02390.17 ORF90625 - 5.8e-43 146.3 0.0 6.7e-43 146.1 0.0 1.0 1 0 0 1 1 1 1 Putative methyltransferase Tic22 PF04278.12 ORF90625 - 0.11 11.9 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Tic22-like family Ribosomal_L6e PF01159.19 ORF87636 - 5.4e-25 88.1 3.2 5.4e-25 88.1 3.2 1.7 2 1 0 2 2 2 1 Ribosomal protein L6e DDDD PF10161.9 ORF86866 - 0.3 10.9 1.1 4.1 7.2 0.1 2.9 3 0 0 3 3 3 0 Putative mitochondrial precursor protein DUF3894 PF13033.6 ORF86866 - 1.6 8.9 9.7 12 6.1 0.1 3.9 2 1 2 4 4 4 0 Protein of unknown function (DUF3894) GCP_C_terminal PF04130.13 ORF84812 - 5.5e-28 98.3 4.8 6.3e-28 98.1 4.8 1.0 1 0 0 1 1 1 1 Gamma tubulin complex component C-terminal RhoGEF PF00621.20 ORF84812 - 0.051 13.8 0.9 0.12 12.7 0.5 1.7 1 1 1 2 2 2 0 RhoGEF domain CMAS PF02353.20 ORF84812 - 0.076 12.3 0.5 0.12 11.7 0.5 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MFS_1 PF07690.16 ORF83184 - 9.8e-07 28.0 0.1 1.3e-06 27.6 0.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily 2-Hacid_dh_C PF02826.19 ORF82318 - 5.1e-25 87.9 0.0 6.1e-25 87.6 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 ORF82318 - 8.2e-05 23.1 1.0 0.00052 20.5 1.0 2.1 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 ORF82318 - 0.024 13.9 1.7 0.3 10.3 0.1 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_2 PF03446.15 ORF82318 - 0.054 13.7 0.2 0.17 12.1 0.2 1.7 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 ORF82318 - 0.15 11.6 0.0 0.25 10.9 0.0 1.4 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain FUSC PF04632.12 ORF81332 - 0.073 11.6 9.7 0.094 11.2 9.7 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Paf1 PF03985.13 ORF78815 - 0.06 12.4 12.0 0.075 12.0 12.0 1.1 1 0 0 1 1 1 0 Paf1 Glypican PF01153.19 ORF78815 - 0.14 11.0 3.5 0.16 10.7 3.5 1.1 1 0 0 1 1 1 0 Glypican Zip PF02535.22 ORF78815 - 0.23 10.7 2.2 0.22 10.7 2.2 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Neur_chan_memb PF02932.16 ORF78815 - 0.32 11.0 1.1 0.38 10.8 1.1 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CDC45 PF02724.14 ORF78815 - 1.1 7.5 8.7 1.1 7.4 8.7 1.0 1 0 0 1 1 1 0 CDC45-like protein Plasmodium_Vir PF05795.11 ORF78815 - 1.2 8.5 9.6 1.5 8.1 9.6 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein Apt1 PF10351.9 ORF78815 - 4.8 5.9 9.1 5 5.9 9.1 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Presenilin PF01080.17 ORF78815 - 5.9 5.5 9.3 6.4 5.4 9.3 1.1 1 0 0 1 1 1 0 Presenilin Eapp_C PF10238.9 ORF78815 - 6.1 6.9 6.8 23 5.1 6.8 1.8 1 1 0 1 1 1 0 E2F-associated phosphoprotein Hid1 PF12722.7 ORF78815 - 7.4 4.6 8.3 7.5 4.5 8.3 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF846 PF05832.12 ORF78008 - 8.4e-44 149.0 11.6 9.7e-44 148.8 11.6 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) AnfO_nitrog PF09582.10 ORF75230 - 0.056 12.8 1.5 0.2 11.0 0.1 2.0 1 1 1 2 2 2 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) ResIII PF04851.15 ORF7291 - 0.11 12.5 5.5 0.038 14.0 2.9 1.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit RPT PF13446.6 ORF7291 - 0.15 12.0 1.3 5.7 6.9 0.2 2.4 2 0 0 2 2 2 0 A repeated domain in UCH-protein MFS_1 PF07690.16 ORF71593 - 9.8e-07 28.0 0.1 1.3e-06 27.6 0.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Asp PF00026.23 ORF70032 - 4.5e-06 26.3 0.1 6.5e-06 25.8 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease HA PF03457.14 ORF69626 - 0.0038 17.5 0.0 0.0068 16.7 0.0 1.4 1 0 0 1 1 1 1 Helicase associated domain DUF846 PF05832.12 ORF68438 - 8.4e-44 149.0 11.6 9.7e-44 148.8 11.6 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) DUF846 PF05832.12 ORF68248 - 8.4e-44 149.0 11.6 9.7e-44 148.8 11.6 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) Asp PF00026.23 ORF64205 - 3.4e-08 33.3 0.0 4.9e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TSNAXIP1_N PF15739.5 ORF63864 - 0.053 13.9 1.2 0.053 13.9 1.2 2.5 1 1 2 3 3 3 0 Translin-associated factor X-interacting N-terminus Cep57_CLD_2 PF14197.6 ORF63864 - 0.24 11.5 7.6 0.33 11.1 0.1 3.1 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 Phage_lysozyme2 PF18013.1 ORF63864 - 0.34 10.9 2.5 10 6.2 0.6 2.2 1 1 1 2 2 2 0 Phage tail lysozyme Ribosomal_L6e PF01159.19 ORF6380 - 1.9e-30 105.6 0.1 1.9e-30 105.6 0.1 1.6 2 0 0 2 2 2 1 Ribosomal protein L6e Pkinase PF00069.25 ORF63687 - 0.00027 20.4 0.0 0.00041 19.8 0.0 1.3 1 1 0 1 1 1 1 Protein kinase domain Astro_capsid_p PF12226.8 ORF63687 - 0.085 12.0 5.3 0.097 11.8 5.3 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF63687 - 0.22 9.7 12.6 0.22 9.7 12.6 1.1 1 0 0 1 1 1 0 Nop14-like family DUF2535 PF10751.9 ORF63687 - 0.24 11.9 3.2 1.2 9.7 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2535) NOA36 PF06524.12 ORF63687 - 1.2 8.4 9.2 1.4 8.1 9.2 1.3 1 0 0 1 1 1 0 NOA36 protein CDC45 PF02724.14 ORF63687 - 2.1 6.6 10.7 2.3 6.4 10.7 1.1 1 0 0 1 1 1 0 CDC45-like protein CobT PF06213.12 ORF63687 - 2.1 7.7 12.9 2.7 7.3 12.9 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT DUF846 PF05832.12 ORF63062 - 8.4e-44 149.0 11.6 9.7e-44 148.8 11.6 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) Fimbrial PF00419.20 ORF61365 - 2.4e-14 53.9 12.3 3e-14 53.5 12.3 1.1 1 0 0 1 1 1 1 Fimbrial protein DUF4369 PF14289.6 ORF61365 - 2.4e-05 24.7 3.0 0.00048 20.6 1.2 2.4 1 1 1 2 2 2 2 Domain of unknown function (DUF4369) Homeobox_KN PF05920.11 ORF61210 - 4.7e-14 52.0 0.5 8.6e-14 51.2 0.5 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF61210 - 1.4e-08 34.5 0.5 1.4e-08 34.5 0.5 1.8 2 0 0 2 2 2 1 Homeodomain Homez PF11569.8 ORF61210 - 0.056 12.9 0.1 0.1 12.1 0.1 1.4 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez INSC_LBD PF16748.5 ORF61210 - 0.07 12.6 0.5 0.13 11.7 0.5 1.4 1 0 0 1 1 1 0 Inscuteable LGN-binding domain HTH_36 PF13730.6 ORF61210 - 0.093 12.7 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF846 PF05832.12 ORF60773 - 8.4e-44 149.0 11.6 9.7e-44 148.8 11.6 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) DUF5577 PF17740.1 ORF60448 - 0.0024 17.6 1.2 0.0027 17.4 1.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5577) ING PF12998.7 ORF60448 - 0.094 13.3 2.0 0.49 11.0 0.2 2.2 1 1 0 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding PH_12 PF16457.5 ORF60448 - 0.74 10.4 5.9 0.22 12.1 0.7 2.0 1 1 1 2 2 2 0 Pleckstrin homology domain Peptidase_C1 PF00112.23 ORF59731 - 3.9e-28 99.0 2.3 5.7e-28 98.5 2.3 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF59731 - 2.6e-08 34.2 1.3 2.6e-08 34.2 1.3 2.0 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) HPP PF04982.13 ORF57881 - 0.098 12.8 6.9 0.35 11.1 0.4 2.3 2 0 0 2 2 2 0 HPP family MFS_1 PF07690.16 ORF57724 - 9.8e-07 28.0 0.1 1.3e-06 27.6 0.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Ribosomal_L6e PF01159.19 ORF57314 - 5.4e-25 88.1 3.2 5.4e-25 88.1 3.2 1.7 2 1 0 2 2 2 1 Ribosomal protein L6e Asp PF00026.23 ORF57036 - 2.2e-06 27.3 0.0 3.3e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease CAC1F_C PF16885.5 ORF55849 - 0.09 12.4 2.3 0.094 12.4 1.8 1.3 1 1 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term RCC1_2 PF13540.6 ORF54027 - 1.7e-07 30.8 8.8 0.95 9.3 0.1 4.4 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Abhydrolase_4 PF08386.10 ORF54027 - 0.032 14.3 1.1 19 5.4 0.0 3.3 4 0 0 4 4 4 0 TAP-like protein NPV_P10 PF05531.12 ORF54027 - 0.12 12.9 1.2 81 3.8 0.1 3.4 4 0 0 4 4 4 0 Nucleopolyhedrovirus P10 protein Methyltransf_29 PF03141.16 ORF54027 - 0.36 9.3 0.5 17 3.8 0.0 2.6 3 0 0 3 3 3 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Phage_holin_7_1 PF16081.5 ORF54027 - 1.9 8.7 15.1 8.9 6.5 5.4 3.5 1 1 2 3 3 3 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family Asp PF00026.23 ORF53794 - 1.4e-06 27.9 0.0 1.9e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Peptidase_M13 PF01431.21 ORF53794 - 0.031 13.9 0.8 0.038 13.6 0.1 1.5 2 0 0 2 2 2 0 Peptidase family M13 Mob1_phocein PF03637.17 ORF53794 - 0.066 13.2 0.0 0.085 12.9 0.0 1.2 1 0 0 1 1 1 0 Mob1/phocein family MORN PF02493.20 ORF49737 - 0.0002 21.1 0.7 0.0055 16.5 0.0 2.8 3 0 0 3 3 3 1 MORN repeat FA_desaturase PF00487.24 ORF49715 - 2.2e-18 67.0 0.6 3.1e-18 66.5 0.6 1.2 1 0 0 1 1 1 1 Fatty acid desaturase Leucyl-specific PF14795.6 ORF4322 - 0.00013 21.9 3.4 0.048 13.7 0.0 3.1 3 0 0 3 3 3 2 Leucine-tRNA synthetase-specific domain DUF2070 PF09843.9 ORF42635 - 0.0095 14.3 0.1 0.012 13.9 0.1 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) KELK PF15796.5 ORF42635 - 0.39 11.2 9.1 1.4 9.4 7.7 2.3 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF1664 PF07889.12 ORF42635 - 0.7 9.9 7.7 0.81 9.7 3.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DivIC PF04977.15 ORF42635 - 3.7 7.4 10.8 6.6 6.6 2.1 2.4 2 0 0 2 2 2 0 Septum formation initiator YabA PF06156.13 ORF42635 - 8.6 7.1 11.3 2.8 8.6 2.8 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Holin_BlyA PF05102.12 ORF42537 - 0.32 11.0 5.4 1.4 8.9 0.3 2.5 2 0 0 2 2 2 0 holin, BlyA family SBP_bac_5 PF00496.22 ORF37593 - 9.9e-17 60.9 0.8 9.9e-17 60.9 0.8 1.4 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 5 Middle OpuAC PF04069.12 ORF37593 - 0.0032 17.1 0.1 0.0046 16.6 0.1 1.2 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system DUF4120 PF13496.6 ORF37593 - 0.047 14.1 0.1 0.14 12.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) Ras PF00071.22 ORF36299 - 1.5e-51 174.2 0.5 1.8e-51 174.0 0.5 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF36299 - 2.7e-30 105.1 0.1 3.7e-30 104.6 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF36299 - 3.6e-12 46.1 0.1 4.4e-12 45.8 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF36299 - 0.018 14.4 0.0 0.022 14.1 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region CAP59_mtransfer PF11735.8 ORF36299 - 0.049 13.3 0.1 0.056 13.1 0.1 1.2 1 1 0 1 1 1 0 Cryptococcal mannosyltransferase 1 SLAM PF06214.11 ORF36299 - 0.073 13.1 0.0 2.7 8.0 0.0 2.2 2 0 0 2 2 2 0 Signaling lymphocytic activation molecule (SLAM) protein SRPRB PF09439.10 ORF36299 - 0.078 12.4 0.0 0.09 12.2 0.0 1.4 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Trypan_PARP PF05887.11 ORF3622 - 0.0022 18.0 1.7 0.0026 17.7 1.7 1.3 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) Neurensin PF14927.6 ORF36041 - 0.031 14.0 0.1 0.057 13.1 0.1 1.4 1 0 0 1 1 1 0 Neurensin ResIII PF04851.15 ORF34708 - 0.11 12.5 5.5 0.038 14.0 2.9 1.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit RPT PF13446.6 ORF34708 - 0.15 12.0 1.3 5.7 6.9 0.2 2.4 2 0 0 2 2 2 0 A repeated domain in UCH-protein EpmC PF04315.12 ORF34172 - 9.1e-81 269.3 0.2 1e-80 269.1 0.2 1.0 1 0 0 1 1 1 1 Elongation factor P hydroxylase SOR PF07682.11 ORF34172 - 0.18 10.7 0.0 0.22 10.4 0.0 1.2 1 0 0 1 1 1 0 Sulphur oxygenase reductase RelB_N PF18506.1 ORF32868 - 0.095 12.5 0.0 0.24 11.2 0.0 1.7 1 0 0 1 1 1 0 RelB Antitoxin alpha helical domain EF-hand_6 PF13405.6 ORF28780 - 0.00055 19.7 0.2 0.002 17.9 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF28780 - 0.0026 17.2 0.1 0.0066 15.9 0.1 1.7 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF28780 - 0.018 14.6 0.1 0.07 12.7 0.1 2.0 1 0 0 1 1 1 0 EF hand EF-hand_7 PF13499.6 ORF28780 - 0.16 12.5 0.3 0.35 11.4 0.3 1.8 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_8 PF13833.6 ORF28780 - 0.34 10.8 0.1 0.34 10.8 0.1 1.8 2 0 0 2 2 2 0 EF-hand domain pair CDC37_M PF08565.11 ORF28589 - 4.6e-12 45.9 0.3 7.1e-12 45.3 0.1 1.4 2 0 0 2 2 2 1 Cdc37 Hsp90 binding domain CDC37_C PF08564.10 ORF28589 - 2.8e-10 40.2 0.9 1.7e-09 37.7 0.0 2.1 2 0 0 2 2 2 1 Cdc37 C terminal domain UBM PF14377.6 ORF28589 - 0.003 17.0 0.4 0.13 11.7 0.1 2.5 2 0 0 2 2 2 1 Ubiquitin binding region Aldedh PF00171.22 ORF28001 - 1.3e-05 23.9 0.0 1.7e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Arabinose_Iso_C PF11762.8 ORF28001 - 0.076 12.8 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 L-arabinose isomerase C-terminal domain TMPIT PF07851.13 ORF26999 - 0.11 11.7 1.3 0.14 11.3 1.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein SH3_3 PF08239.11 ORF26519 - 0.00024 21.3 0.8 0.0064 16.7 0.0 2.8 2 1 1 3 3 3 1 Bacterial SH3 domain Ribosomal_L6e PF01159.19 ORF25724 - 5.4e-25 88.1 3.2 5.4e-25 88.1 3.2 1.7 2 1 0 2 2 2 1 Ribosomal protein L6e CMD PF02627.20 ORF24306 - 2.2e-08 34.0 0.1 1.4e-07 31.5 0.0 1.9 1 1 1 2 2 2 1 Carboxymuconolactone decarboxylase family NUDIX PF00293.28 ORF20348 - 1.2e-19 70.6 0.0 1.6e-19 70.3 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Tyr-DNA_phospho PF06087.12 ORF20348 - 0.075 11.9 0.0 0.084 11.8 0.0 1.1 1 0 0 1 1 1 0 Tyrosyl-DNA phosphodiesterase Holin_BlyA PF05102.12 ORF18604 - 0.32 11.0 5.4 1.4 8.9 0.3 2.5 2 0 0 2 2 2 0 holin, BlyA family EF-hand_6 PF13405.6 ORF18496 - 0.00055 19.7 0.2 0.002 17.9 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF18496 - 0.0026 17.2 0.1 0.0066 15.9 0.1 1.7 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF18496 - 0.018 14.6 0.1 0.07 12.7 0.1 2.0 1 0 0 1 1 1 0 EF hand EF-hand_7 PF13499.6 ORF18496 - 0.16 12.5 0.3 0.35 11.4 0.3 1.8 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_8 PF13833.6 ORF18496 - 0.34 10.8 0.1 0.34 10.8 0.1 1.8 2 0 0 2 2 2 0 EF-hand domain pair DUF1664 PF07889.12 ORF16159 - 0.00042 20.4 5.1 0.11 12.6 1.1 2.5 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) Tropomyosin PF00261.20 ORF16159 - 0.00046 19.6 6.4 0.074 12.4 0.9 2.1 1 1 1 2 2 2 2 Tropomyosin COG2 PF06148.11 ORF16159 - 0.00067 19.7 7.1 0.004 17.3 0.5 2.2 1 1 1 2 2 2 1 COG (conserved oligomeric Golgi) complex component, COG2 XhlA PF10779.9 ORF16159 - 0.00076 19.6 0.7 0.03 14.5 0.0 2.3 2 0 0 2 2 2 1 Haemolysin XhlA Apolipoprotein PF01442.18 ORF16159 - 0.0013 18.6 9.6 0.002 18.1 9.6 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF16159 - 0.0014 18.7 1.9 0.016 15.3 1.9 2.0 1 1 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus Sin3_corepress PF08295.12 ORF16159 - 0.0029 17.7 1.1 0.0073 16.4 0.2 2.0 2 1 0 2 2 2 1 Sin3 family co-repressor MAP65_ASE1 PF03999.12 ORF16159 - 0.0033 16.2 4.8 0.0036 16.1 4.8 1.1 1 0 0 1 1 1 1 Microtubule associated protein (MAP65/ASE1 family) DUF948 PF06103.11 ORF16159 - 0.0036 17.5 1.4 0.24 11.7 0.0 2.3 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF948) BLOC1_2 PF10046.9 ORF16159 - 0.0085 16.4 1.0 3.1 8.2 0.1 2.4 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Ku_PK_bind PF08785.11 ORF16159 - 0.0093 16.1 0.7 0.014 15.5 0.7 1.4 1 0 0 1 1 1 1 Ku C terminal domain like Helo_like_N PF17111.5 ORF16159 - 0.011 15.1 6.5 0.66 9.3 1.5 2.2 1 1 0 2 2 2 0 Fungal N-terminal domain of STAND proteins Uso1_p115_C PF04871.13 ORF16159 - 0.013 15.9 6.1 0.2 12.0 0.6 2.3 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Spc7 PF08317.11 ORF16159 - 0.014 14.3 5.1 0.02 13.8 5.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF812 PF05667.11 ORF16159 - 0.016 14.1 4.6 0.024 13.6 4.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Tropomyosin_1 PF12718.7 ORF16159 - 0.017 15.3 5.8 0.77 9.9 0.2 2.2 2 0 0 2 2 2 0 Tropomyosin like HMMR_N PF15905.5 ORF16159 - 0.019 14.5 6.5 0.097 12.1 1.4 2.0 1 1 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF16 PF01519.16 ORF16159 - 0.028 14.9 3.0 1.4 9.5 2.9 2.2 1 1 0 1 1 1 0 Protein of unknown function DUF16 TPR_MLP1_2 PF07926.12 ORF16159 - 0.03 14.4 8.7 0.63 10.1 0.3 2.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF2046 PF09755.9 ORF16159 - 0.042 13.1 6.0 0.027 13.7 3.5 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) CheZ PF04344.13 ORF16159 - 0.043 13.7 5.4 0.12 12.3 4.7 1.8 1 1 0 1 1 1 0 Chemotaxis phosphatase, CheZ DUF4208 PF13907.6 ORF16159 - 0.045 14.2 0.3 0.91 10.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4208) Laminin_II PF06009.12 ORF16159 - 0.057 13.4 2.9 0.91 9.5 0.2 2.1 1 1 1 2 2 2 0 Laminin Domain II bZIP_1 PF00170.21 ORF16159 - 0.061 13.4 2.1 0.93 9.6 0.0 3.2 2 2 2 4 4 4 0 bZIP transcription factor GBP_C PF02841.14 ORF16159 - 0.076 12.4 3.9 0.1 12.0 3.9 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain COG6 PF06419.11 ORF16159 - 0.087 11.0 4.9 0.032 12.5 1.6 1.7 1 1 0 1 1 1 0 Conserved oligomeric complex COG6 ZYG-11_interact PF05884.12 ORF16159 - 0.11 11.9 1.2 0.14 11.5 1.2 1.1 1 0 0 1 1 1 0 Interactor of ZYG-11 DUF1640 PF07798.11 ORF16159 - 0.11 12.5 4.8 0.99 9.4 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) Gp-FAR-1 PF05823.12 ORF16159 - 0.12 12.8 0.1 0.15 12.4 0.1 1.3 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Phage_Mu_Gam PF07352.12 ORF16159 - 0.12 12.2 0.7 0.22 11.4 0.1 1.7 2 0 0 2 2 1 0 Bacteriophage Mu Gam like protein Occludin_ELL PF07303.13 ORF16159 - 0.19 12.5 0.7 1.8 9.4 0.0 2.2 1 1 0 2 2 2 0 Occludin homology domain UPF0242 PF06785.11 ORF16159 - 0.19 11.8 6.2 2.3 8.3 0.3 2.1 1 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 ORF16159 - 0.21 10.2 0.8 0.52 8.9 0.6 1.5 1 1 1 2 2 2 0 Flagellar Assembly Protein A YabA PF06156.13 ORF16159 - 0.23 12.1 3.9 5.9 7.6 2.9 2.5 1 1 1 2 2 2 0 Initiation control protein YabA Jnk-SapK_ap_N PF09744.9 ORF16159 - 0.27 11.5 9.6 1.3 9.2 4.1 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DASH_Dam1 PF08653.10 ORF16159 - 0.3 10.9 1.3 2.9 7.8 0.1 2.6 2 1 1 3 3 3 0 DASH complex subunit Dam1 ZapB PF06005.12 ORF16159 - 0.32 11.5 8.6 3.8 8.0 0.7 2.6 2 1 0 2 2 2 0 Cell division protein ZapB NPV_P10 PF05531.12 ORF16159 - 0.39 11.2 2.1 19 5.8 0.6 2.5 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Syntaxin-6_N PF09177.11 ORF16159 - 0.55 10.8 5.4 16 6.1 5.5 2.4 1 1 0 1 1 1 0 Syntaxin 6, N-terminal HAUS6_N PF14661.6 ORF16159 - 0.65 9.5 5.5 3.3 7.2 0.6 2.0 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus Nbl1_Borealin_N PF10444.9 ORF16159 - 0.71 9.6 4.2 3.7 7.3 0.5 2.7 2 1 0 2 2 2 0 Nbl1 / Borealin N terminal Fzo_mitofusin PF04799.13 ORF16159 - 1.1 8.7 6.0 2 8.0 1.0 2.2 1 1 0 2 2 2 0 fzo-like conserved region DUF4140 PF13600.6 ORF16159 - 2.1 8.8 7.0 15 6.1 0.4 2.5 1 1 2 3 3 2 0 N-terminal domain of unknown function (DUF4140) FUSC PF04632.12 ORF16159 - 2.2 6.7 7.8 2.7 6.4 7.8 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Dabb PF07876.12 ORF15435 - 0.0014 19.2 1.5 0.11 13.2 0.0 2.2 2 0 0 2 2 2 2 Stress responsive A/B Barrel Domain GRIP PF01465.20 ORF15435 - 0.02 14.8 0.2 0.05 13.5 0.2 1.7 1 0 0 1 1 1 0 GRIP domain Asn_synthase PF00733.21 ORF15256 - 8e-14 52.1 0.0 1e-13 51.7 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase Pkinase PF00069.25 ORF15127 - 0.0024 17.3 0.0 0.0034 16.8 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Lipase_3 PF01764.25 ORF14869 - 2.4e-28 98.8 0.0 3e-28 98.4 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) DIRP PF06584.13 ORF14832 - 6.7 6.9 8.5 1.8 8.8 2.1 2.2 1 1 1 2 2 2 0 DIRP Cwf_Cwc_15 PF04889.12 ORF14626 - 0.026 14.3 16.0 0.03 14.0 16.0 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Nop14 PF04147.12 ORF14626 - 0.031 12.5 18.9 0.035 12.3 18.9 1.1 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 ORF14626 - 0.083 12.3 20.0 0.092 12.2 20.0 1.1 1 0 0 1 1 1 0 SDA1 NPR3 PF03666.13 ORF14626 - 0.14 10.9 9.3 0.18 10.6 9.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF913 PF06025.12 ORF14626 - 0.25 10.3 3.3 0.3 10.0 3.3 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) CDC45 PF02724.14 ORF14626 - 0.33 9.2 13.3 0.36 9.1 13.3 1.1 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF14626 - 0.66 8.0 18.2 0.77 7.8 18.2 1.3 1 0 0 1 1 1 0 DNA polymerase phi Smg8_Smg9 PF10220.9 ORF14626 - 1.2 7.3 7.1 1.5 7.0 7.1 1.0 1 0 0 1 1 1 0 Smg8_Smg9 Neur_chan_memb PF02932.16 ORF14626 - 1.4 8.9 3.4 1.5 8.8 3.4 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Presenilin PF01080.17 ORF14626 - 3.4 6.3 8.3 3.8 6.2 8.3 1.1 1 0 0 1 1 1 0 Presenilin ALMT PF11744.8 ORF14626 - 3.5 6.4 6.2 3.8 6.2 6.2 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Hid1 PF12722.7 ORF14626 - 4.1 5.4 8.8 4.5 5.3 8.8 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF4746 PF15928.5 ORF14626 - 9.5 5.5 22.2 2.4 7.5 19.1 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4746) GCD14 PF08704.10 ORF110855 - 2.1 7.9 8.3 4.2 7.0 8.4 1.6 1 1 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Ndc1_Nup PF09531.10 ORF110855 - 9.5 4.8 8.0 11 4.5 8.0 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF4548 PF15081.6 ORF107646 - 0.078 12.8 1.7 1 9.1 0.5 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4548) DUF1706 PF08020.11 ORF107646 - 0.53 10.2 4.5 1.1 9.2 4.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1706) Lyase_1 PF00206.20 ORF105498 - 7e-32 111.1 0.3 8e-32 110.9 0.3 1.0 1 0 0 1 1 1 1 Lyase LPD34 PF18852.1 ORF105498 - 0.039 13.5 1.0 0.34 10.4 0.0 2.2 2 1 0 2 2 2 0 Large polyvalent protein associated domain 34 BLI1 PF17324.2 ORF105498 - 0.12 13.0 5.2 0.59 10.8 3.2 2.2 2 0 0 2 2 2 0 BLOC-1 interactor 1 BET PF17035.5 ORF105498 - 0.18 12.0 2.7 5.4 7.3 0.1 2.8 2 1 0 2 2 2 0 Bromodomain extra-terminal - transcription regulation MAM33 PF02330.16 ORF105426 - 5.8e-12 46.0 0.9 8.3e-12 45.5 0.9 1.2 1 0 0 1 1 1 1 Mitochondrial glycoprotein MRP-S27 PF10037.9 ORF105426 - 0.01 14.7 1.8 0.015 14.2 1.8 1.2 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 TANGO2 PF05742.12 ORF105426 - 0.049 13.7 0.6 0.051 13.6 0.6 1.1 1 0 0 1 1 1 0 Transport and Golgi organisation 2 Acyl-ACP_TE PF01643.17 ORF105426 - 0.05 12.9 0.5 0.071 12.4 0.5 1.2 1 0 0 1 1 1 0 Acyl-ACP thioesterase Prominin PF05478.11 ORF105426 - 0.1 10.5 2.3 0.12 10.4 2.3 1.0 1 0 0 1 1 1 0 Prominin Glyco_transf_90 PF05686.12 ORF105127 - 6.6e-19 68.1 0.0 9.2e-19 67.6 0.0 1.2 1 1 0 1 1 1 1 Glycosyl transferase family 90 Glyco_trans_1_2 PF13524.6 ORF105127 - 4.2e-05 23.8 0.0 0.00013 22.3 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 CoA_binding_3 PF13727.6 ORF105127 - 0.081 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 CoA-binding domain Plasmodium_Vir PF05795.11 ORF10392 - 0.00051 19.6 1.3 0.00058 19.4 1.3 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF10392 - 0.0016 17.4 5.0 0.0016 17.4 5.0 1.9 1 1 1 2 2 1 1 Mechanosensitive ion channel inner membrane domain 1 CDC45 PF02724.14 ORF10392 - 0.0043 15.4 12.6 0.0045 15.4 12.6 1.1 1 0 0 1 1 1 1 CDC45-like protein RR_TM4-6 PF06459.12 ORF10392 - 0.033 14.0 15.3 0.044 13.6 15.3 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 BSMAP PF12280.8 ORF10392 - 0.037 14.2 5.9 0.087 13.0 5.9 1.6 1 1 0 1 1 1 0 Brain specific membrane anchored protein DUF913 PF06025.12 ORF10392 - 0.049 12.6 4.5 0.063 12.3 4.5 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF2207 PF09972.9 ORF10392 - 0.058 12.2 2.6 0.097 11.4 2.6 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) LAP1C PF05609.12 ORF10392 - 0.059 12.5 9.3 0.068 12.3 9.3 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) DUF2828 PF11443.8 ORF10392 - 0.063 11.4 5.2 0.078 11.1 5.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) EOS1 PF12326.8 ORF10392 - 0.12 12.4 0.1 0.18 11.7 0.1 1.3 1 0 0 1 1 1 0 N-glycosylation protein DDHD PF02862.17 ORF10392 - 0.12 12.5 2.2 0.14 12.3 2.2 1.2 1 0 0 1 1 1 0 DDHD domain ALMT PF11744.8 ORF10392 - 0.14 11.0 7.2 0.16 10.8 7.2 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter SLC12 PF03522.15 ORF10392 - 0.18 10.8 7.8 0.19 10.7 7.8 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Hid1 PF12722.7 ORF10392 - 0.21 9.7 8.8 0.25 9.4 8.8 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Granin PF01271.17 ORF10392 - 0.23 10.3 30.0 0.27 10.1 30.0 1.0 1 0 0 1 1 1 0 Granin (chromogranin or secretogranin) CSG2 PF16965.5 ORF10392 - 0.28 10.1 5.1 0.47 9.4 5.1 1.5 1 1 0 1 1 1 0 Ceramide synthase regulator DUF2052 PF09747.9 ORF10392 - 0.28 11.3 23.2 0.39 10.8 23.2 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Tho2 PF11262.8 ORF10392 - 0.31 10.2 7.4 0.4 9.8 7.4 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Orf78 PF06024.12 ORF10392 - 0.35 11.2 6.0 2.7 8.4 6.0 2.1 1 1 0 1 1 1 0 Orf78 (ac78) FAM60A PF15396.6 ORF10392 - 0.52 10.3 5.2 0.6 10.1 5.2 1.2 1 0 0 1 1 1 0 Protein Family FAM60A CENP-N PF05238.13 ORF10392 - 0.72 9.1 7.5 0.81 8.9 7.5 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like V_ATPase_I PF01496.19 ORF10392 - 0.77 7.6 11.0 0.86 7.4 11.0 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BUD22 PF09073.10 ORF10392 - 0.82 8.9 23.8 1 8.6 23.8 1.1 1 0 0 1 1 1 0 BUD22 SDA1 PF05285.12 ORF10392 - 0.83 9.0 31.4 1 8.7 31.4 1.1 1 0 0 1 1 1 0 SDA1 Borrelia_P83 PF05262.11 ORF10392 - 0.92 7.9 15.2 0.91 7.9 15.2 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein Nop14 PF04147.12 ORF10392 - 1.9 6.6 29.4 2.2 6.4 29.4 1.0 1 0 0 1 1 1 0 Nop14-like family DUF4045 PF13254.6 ORF10392 - 2.1 7.9 14.2 2.4 7.7 14.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) Vfa1 PF08432.10 ORF10392 - 2.3 8.5 21.1 3 8.2 21.1 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 NPR3 PF03666.13 ORF10392 - 3.3 6.4 12.1 4.2 6.1 12.1 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CLN3 PF02487.17 ORF10392 - 3.9 6.4 8.1 5.3 6.0 8.0 1.3 1 1 0 1 1 1 0 CLN3 protein AAA_11 PF13086.6 ORF10392 - 7.5 6.3 12.9 9.5 5.9 12.9 1.1 1 0 0 1 1 1 0 AAA domain NARP1 PF12569.8 ORF10392 - 8 5.2 16.5 9.9 4.9 16.5 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Fimbrial PF00419.20 ORF102723 - 9.3e-26 90.9 11.1 1.5e-25 90.3 11.1 1.3 1 0 0 1 1 1 1 Fimbrial protein FimA PF16970.5 ORF102723 - 0.00026 21.2 14.0 0.00097 19.3 9.2 2.7 1 1 1 2 2 2 1 Type-1 fimbrial protein, A Sugarporin_N PF11471.8 ORF102723 - 0.046 13.7 4.5 0.15 12.1 4.5 1.9 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension DUF3568 PF12092.8 ORF102723 - 7 6.7 9.8 0.41 10.7 2.5 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3568) CPBP PF02517.16 ORF102212 - 3.9 7.9 7.0 6.3 7.3 7.0 1.4 1 1 0 1 1 1 0 CPBP intramembrane metalloprotease COPI_assoc PF08507.10 ORF101458 - 5.1e-12 46.0 1.8 6.7e-12 45.6 1.8 1.1 1 0 0 1 1 1 1 COPI associated protein Asp PF00026.23 ORF100754 - 8.2e-07 28.7 0.0 1.2e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Pox_A9 PF04835.12 ORF100338 - 0.39 10.9 1.8 0.41 10.8 0.6 1.6 2 0 0 2 2 2 0 A9 protein conserved region Focadhesin PF11229.8 NODE_38865_length_541_cov_3.371542_g31509_i0reverse_frame_1 - 0.24 9.6 0.0 0.3 9.2 0.0 1.1 1 0 0 1 1 1 0 Focadhesin EcsB PF05975.12 NODE_38861_length_541_cov_6.452569_g31505_i0reverse_frame_1 - 0.069 12.0 5.3 0.084 11.7 5.3 1.1 1 0 0 1 1 1 0 Bacterial ABC transporter protein EcsB NSP10 PF09401.10 NODE_38856_length_541_cov_75.306324_g31500_i0forward_frame_1 - 0.044 13.8 0.7 0.065 13.3 0.7 1.2 1 0 0 1 1 1 0 RNA synthesis protein NSP10 TBK1_CCD1 PF18394.1 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.0052 16.4 0.6 0.0071 15.9 0.6 1.2 1 0 0 1 1 1 1 TANK-binding kinase 1 coiled-coil domain 1 YkyA PF10368.9 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.012 15.3 5.7 0.017 14.8 5.7 1.2 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein THOC7 PF05615.13 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.014 15.6 6.1 0.019 15.2 6.1 1.3 1 0 0 1 1 1 0 Tho complex subunit 7 Kinesin PF00225.23 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.029 13.3 0.9 0.4 9.6 0.4 2.3 1 1 0 1 1 1 0 Kinesin motor domain UPF0242 PF06785.11 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.056 13.5 5.3 0.08 13.0 5.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMF_TATA_bd PF12325.8 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.081 13.1 12.0 0.42 10.9 3.2 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding SseB_C PF14581.6 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.082 13.0 1.6 1.2 9.3 0.3 2.7 2 1 1 3 3 3 0 SseB protein C-terminal domain BRI3BP PF14965.6 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.12 11.9 0.9 1.1 8.8 0.8 2.1 1 1 1 2 2 2 0 Negative regulator of p53/TP53 DUF1664 PF07889.12 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.13 12.3 2.4 0.2 11.7 2.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) ZapB PF06005.12 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.22 12.0 10.1 5.1 7.6 9.6 2.5 1 1 0 1 1 1 0 Cell division protein ZapB Spc7 PF08317.11 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.25 10.2 9.2 0.32 9.9 9.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein LPP PF04728.13 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.35 11.3 3.3 0.86 10.0 2.1 2.2 1 1 1 2 2 2 0 Lipoprotein leucine-zipper HalX PF08663.10 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.4 11.0 16.2 0.28 11.5 4.1 2.9 1 1 1 2 2 2 0 HalX domain DUF3138 PF11336.8 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.5 8.9 1.6 0.58 8.7 1.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3138) ABC_tran_CTD PF16326.5 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 1.1 9.5 12.6 0.91 9.8 10.3 2.0 1 1 1 2 2 2 0 ABC transporter C-terminal domain Seryl_tRNA_N PF02403.22 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 1.5 9.1 7.4 2.7 8.3 7.4 1.4 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Viral_P18 PF04521.13 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 1.8 8.3 4.9 4.4 7.1 1.1 2.3 1 1 1 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein TSC22 PF01166.18 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 2 8.8 6.6 1.7 9.0 1.4 2.4 1 1 1 2 2 2 0 TSC-22/dip/bun family SlyX PF04102.12 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 3 8.5 9.9 11 6.7 1.4 2.9 2 1 1 3 3 3 0 SlyX GAPT PF11770.8 NODE_38847_length_541_cov_155.583004_g31491_i0reverse_frame_1 - 3.1 7.6 4.7 6 6.7 4.2 1.7 1 1 1 2 2 2 0 GRB2-binding adapter (GAPT) APG17 PF04108.12 NODE_38832_length_542_cov_2.696252_g31476_i0reverse_frame_1 - 0.0035 16.5 1.0 0.0035 16.5 1.0 1.4 2 0 0 2 2 2 1 Autophagy protein Apg17 Bac_RepA_C PF18008.1 NODE_38832_length_542_cov_2.696252_g31476_i0reverse_frame_1 - 0.04 14.3 2.7 0.7 10.3 0.2 2.5 2 1 0 2 2 2 0 Replication initiator protein A C-terminal domain Cyt-b5 PF00173.28 NODE_38782_length_542_cov_64769.015779_g31429_i0forward_frame_1 - 2.1e-07 31.0 0.3 2.8e-07 30.6 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 NODE_38782_length_542_cov_64769.015779_g31429_i0forward_frame_1 - 0.2 12.2 1.4 0.67 10.5 0.3 2.2 2 1 0 2 2 2 0 Pet100 UNC119_bdg PF15435.6 NODE_38775_length_543_cov_3.486220_g31422_i0reverse_frame_1 - 0.87 9.1 6.9 1.2 8.7 6.2 1.7 1 1 0 1 1 1 0 UNC119-binding protein C5orf30 homologue PhageMin_Tail PF10145.9 NODE_38770_length_543_cov_3.781496_g31417_i0reverse_frame_1 - 0.00066 19.6 0.9 0.00097 19.1 0.9 1.2 1 0 0 1 1 1 1 Phage-related minor tail protein PQQ_2 PF13360.6 NODE_38753_length_543_cov_168.206693_g31400_i0reverse_frame_1 - 0.11 12.1 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 PQQ-like domain DUF5122 PF17164.4 NODE_38753_length_543_cov_168.206693_g31400_i0reverse_frame_1 - 0.11 12.8 0.1 23 5.4 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5122) beta-propeller TPR_MalT PF17874.1 NODE_38737_length_544_cov_2.463654_g31385_i0reverse_frame_3 - 0.2 11.0 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 MalT-like TPR region Acyl_transf_3 PF01757.22 NODE_38736_length_544_cov_2.510806_g31384_i0reverse_frame_3 - 1.2e-16 60.8 7.1 1.5e-16 60.4 7.1 1.1 1 0 0 1 1 1 1 Acyltransferase family DUF2189 PF09955.9 NODE_38734_length_544_cov_3.017682_g31382_i0reverse_frame_3 - 0.13 12.5 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2189) CotJB PF12652.7 NODE_38730_length_544_cov_4.607073_g31378_i0reverse_frame_3 - 0.041 14.1 0.0 0.62 10.3 0.0 2.3 1 1 1 2 2 2 0 CotJB protein Thioredoxin_8 PF13905.6 NODE_38730_length_544_cov_4.607073_g31378_i0reverse_frame_3 - 0.048 14.0 0.1 0.08 13.3 0.1 1.4 1 0 0 1 1 1 0 Thioredoxin-like Thioredoxin PF00085.20 NODE_38730_length_544_cov_4.607073_g31378_i0reverse_frame_3 - 0.1 12.6 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin DUF777 PF05606.11 NODE_38730_length_544_cov_4.607073_g31378_i0forward_frame_3 - 1.4 8.6 10.7 1.9 8.3 10.7 1.2 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF777) SPT16 PF08644.11 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_3 - 6.8 6.9 12.4 12 6.1 12.0 1.6 1 1 1 2 2 2 0 FACT complex subunit (SPT16/CDC68) AAA_23 PF13476.6 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.00039 21.0 11.8 0.00044 20.8 11.8 1.1 1 0 0 1 1 1 1 AAA domain zf-C2H2_jaz PF12171.8 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.0053 17.0 0.5 0.0053 17.0 0.5 1.8 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.021 15.2 0.3 0.052 13.9 0.3 1.7 1 0 0 1 1 1 0 Zinc-finger of C2H2 type Vps39_2 PF10367.9 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.029 14.8 4.2 0.029 14.8 4.2 1.6 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 AMP-binding_C_2 PF14535.6 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.052 13.9 3.3 0.094 13.0 3.3 1.4 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain DUF4407 PF14362.6 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.11 11.8 6.0 0.13 11.6 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) RNA_polI_A14 PF08203.11 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.12 13.1 1.7 0.22 12.3 1.4 1.6 1 1 0 1 1 1 0 Yeast RNA polymerase I subunit RPA14 DUF1343 PF07075.11 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.36 10.1 4.7 0.45 9.8 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1343) ThiS PF02597.20 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.8 10.4 3.9 75 4.1 3.9 2.4 1 1 0 1 1 1 0 ThiS family AAA_11 PF13086.6 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 1.4 8.7 14.5 2.2 8.0 14.5 1.3 1 1 0 1 1 1 0 AAA domain Pacifastin_I PF05375.13 NODE_38713_length_544_cov_107.302554_g31362_i0forward_frame_3 - 0.048 13.4 1.7 0.097 12.4 1.7 1.5 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) Antistasin PF02822.14 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.00012 22.7 0.4 0.019 15.6 0.1 2.3 2 0 0 2 2 2 1 Antistasin family DUF4215 PF13948.6 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.018 15.4 0.0 9.3 6.8 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4215) cEGF PF12662.7 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.027 14.4 1.9 3.3 7.7 0.0 2.3 2 0 0 2 2 2 0 Complement Clr-like EGF-like EGF_CA PF07645.15 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.18 12.0 1.8 5.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Calcium-binding EGF domain FXa_inhibition PF14670.6 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.45 10.8 1.4 26 5.2 0.1 2.2 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site PsbH PF00737.20 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.9 9.3 0.1 0.9 9.3 0.1 2.9 3 0 0 3 3 3 0 Photosystem II 10 kDa phosphoprotein AGTRAP PF06396.11 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 1.1 9.0 10.4 1.5 8.6 10.4 1.3 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) Flu_M2 PF00599.17 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_2 - 0.035 14.2 0.7 0.066 13.3 0.7 1.5 1 0 0 1 1 1 0 Influenza Matrix protein (M2) Peptidase_A22B PF04258.13 NODE_38706_length_544_cov_131.703340_g31355_i0reverse_frame_3 - 0.03 13.9 10.3 0.039 13.5 10.3 1.1 1 0 0 1 1 1 0 Signal peptide peptidase Tcf25 PF04910.14 NODE_38704_length_544_cov_131.744597_g31353_i0reverse_frame_2 - 0.056 12.5 4.0 0.07 12.2 4.0 1.1 1 0 0 1 1 1 0 Transcriptional repressor TCF25 CS PF04969.16 NODE_38699_length_544_cov_182.650295_g31349_i0forward_frame_3 - 1.7e-09 38.5 0.1 2.4e-09 38.1 0.1 1.2 1 0 0 1 1 1 1 CS domain PSI_integrin PF17205.3 NODE_38689_length_544_cov_394.746562_g31339_i0reverse_frame_3 - 0.85 9.4 11.8 1.7 8.4 11.8 1.5 1 0 0 1 1 1 0 Integrin plexin domain Lipocalin PF00061.23 NODE_38689_length_544_cov_394.746562_g31339_i0reverse_frame_2 - 0.03 14.5 0.0 0.044 14.0 0.0 1.3 1 0 0 1 1 1 0 Lipocalin / cytosolic fatty-acid binding protein family PGDYG PF14083.6 NODE_38689_length_544_cov_394.746562_g31339_i0reverse_frame_2 - 0.055 13.7 0.0 21 5.4 0.0 2.7 2 1 0 2 2 2 0 PGDYG protein Glyco_hydro_65C PF03633.15 NODE_38683_length_544_cov_30238.571709_g30592_i5reverse_frame_3 - 0.59 10.1 1.7 2.1 8.3 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain DUF2723 PF11028.8 NODE_38681_length_545_cov_1.774510_g31333_i0forward_frame_2 - 0.31 11.0 7.2 0.4 10.6 7.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) PTS_IIB PF02302.17 NODE_38675_length_545_cov_3.519608_g31327_i0forward_frame_3 - 0.0072 17.0 0.0 0.011 16.4 0.0 1.4 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF2975 PF11188.8 NODE_38675_length_545_cov_3.519608_g31327_i0forward_frame_3 - 0.026 14.4 0.5 0.035 14.0 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2975) AcrZ PF10766.9 NODE_38675_length_545_cov_3.519608_g31327_i0forward_frame_3 - 0.054 13.1 0.8 3.5 7.3 0.2 2.4 2 0 0 2 2 2 0 Multidrug efflux pump-associated protein AcrZ Phage_holin_3_6 PF07332.11 NODE_38675_length_545_cov_3.519608_g31327_i0forward_frame_3 - 2.3 8.3 9.4 9 6.4 9.4 2.0 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III EphA2_TM PF14575.6 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.016 16.1 1.3 3.3 8.6 1.6 2.3 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain TMEM51 PF15345.6 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.036 13.9 1.0 0.045 13.6 1.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 51 DUF898 PF05987.13 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.072 12.1 1.9 0.098 11.7 1.9 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF2615 PF11027.8 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.12 12.5 0.0 12 6.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2615) Amnionless PF14828.6 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.12 11.2 0.6 0.16 10.8 0.6 1.2 1 0 0 1 1 1 0 Amnionless SSP160 PF06933.11 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.13 10.4 7.0 0.18 10.0 7.0 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF2207 PF09972.9 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.16 10.7 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3446 PF11928.8 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.49 10.7 13.3 0.1 12.9 9.6 1.7 2 0 0 2 2 2 0 Early growth response N-terminal domain DUF2749 PF10907.8 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 8.7 6.6 6.8 22 5.3 6.8 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) BatD PF13584.6 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 0.015 14.2 0.1 0.02 13.7 0.1 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF3446 PF11928.8 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 0.051 13.9 12.7 0.053 13.8 5.2 2.2 2 0 0 2 2 2 0 Early growth response N-terminal domain IMUP PF15761.5 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 0.065 13.9 6.8 0.1 13.3 6.8 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein Mucin PF01456.17 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 0.6 10.1 23.5 0.73 9.8 23.5 1.4 1 1 0 1 1 1 0 Mucin-like glycoprotein DUF4834 PF16118.5 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 1 10.3 0.1 1 10.3 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) SR-25 PF10500.9 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 3.1 7.3 15.4 5.4 6.6 15.4 1.3 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF5408 PF17402.2 NODE_38671_length_545_cov_40.123529_g31323_i0reverse_frame_3 - 0.46 10.4 5.0 41 4.2 0.1 3.6 4 0 0 4 4 4 0 Family of unknown function (DUF5408) HTH_15 PF12324.8 NODE_38671_length_545_cov_40.123529_g31323_i0reverse_frame_2 - 0.0054 16.6 0.0 0.88 9.6 0.0 3.1 3 0 0 3 3 3 1 Helix-turn-helix domain of alkylmercury lyase TMEM100 PF16311.5 NODE_38671_length_545_cov_40.123529_g31323_i0forward_frame_3 - 1.4 8.5 8.7 22 4.6 0.1 3.3 3 1 0 3 3 3 0 Transmembrane protein 100 Melittin PF01372.17 NODE_38671_length_545_cov_40.123529_g31323_i0forward_frame_3 - 1.8 8.7 6.4 20 5.4 0.1 4.2 4 0 0 4 4 4 0 Melittin RCC1_2 PF13540.6 NODE_38671_length_545_cov_40.123529_g31323_i0forward_frame_2 - 0.0016 18.1 1.8 4.9 7.1 0.1 3.2 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DDE_Tnp_1_3 PF13612.6 NODE_38671_length_545_cov_40.123529_g31323_i0forward_frame_2 - 0.013 15.5 0.2 15 5.6 0.0 3.0 3 0 0 3 3 3 0 Transposase DDE domain Methyltransf_11 PF08241.12 NODE_38664_length_545_cov_76.386275_g31316_i0forward_frame_2 - 4.5e-05 24.0 0.0 7.7e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_38664_length_545_cov_76.386275_g31316_i0forward_frame_2 - 6.5e-05 23.6 0.0 0.0001 22.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.13 NODE_38664_length_545_cov_76.386275_g31316_i0forward_frame_2 - 7.6e-05 22.3 0.0 0.0001 21.9 0.0 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 MetW PF07021.12 NODE_38664_length_545_cov_76.386275_g31316_i0forward_frame_2 - 0.0003 20.5 0.0 0.00035 20.2 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_2 PF00891.18 NODE_38664_length_545_cov_76.386275_g31316_i0forward_frame_2 - 0.0016 17.8 0.0 0.002 17.5 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_4 PF02390.17 NODE_38664_length_545_cov_76.386275_g31316_i0forward_frame_2 - 0.035 13.6 0.0 0.05 13.1 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase PCMT PF01135.19 NODE_38664_length_545_cov_76.386275_g31316_i0forward_frame_2 - 0.045 13.5 0.0 0.06 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 NODE_38664_length_545_cov_76.386275_g31316_i0forward_frame_2 - 0.093 12.5 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain FtsJ PF01728.19 NODE_38664_length_545_cov_76.386275_g31316_i0forward_frame_2 - 0.097 12.8 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 FtsJ-like methyltransferase Oxysterol_BP PF01237.18 NODE_38647_length_545_cov_164.584314_g31300_i0reverse_frame_3 - 5.1e-33 114.4 4.3 9.1e-33 113.6 4.3 1.3 1 1 0 1 1 1 1 Oxysterol-binding protein 7tm_1 PF00001.21 NODE_38646_length_545_cov_172.737255_g31299_i0reverse_frame_3 - 4.4 6.6 8.4 5.5 6.2 8.4 1.4 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) RGCC PF15151.6 NODE_38646_length_545_cov_172.737255_g31299_i0reverse_frame_2 - 0.05 13.8 4.6 0.087 13.1 4.6 1.4 1 0 0 1 1 1 0 Response gene to complement 32 protein family DUF5520 PF17658.1 NODE_38646_length_545_cov_172.737255_g31299_i0reverse_frame_2 - 4.7 6.2 11.9 1.5 7.9 1.2 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5520) TMCO5 PF14992.6 NODE_38610_length_546_cov_130.346380_g31266_i0forward_frame_3 - 0.2 11.2 0.1 0.26 10.8 0.1 1.2 1 0 0 1 1 1 0 TMCO5 family Asp PF00026.23 NODE_38601_length_546_cov_174.964775_g31258_i0forward_frame_3 - 1.4e-08 34.6 0.0 1.5e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Peptidase_S80 PF07230.11 NODE_38601_length_546_cov_174.964775_g31258_i0forward_frame_3 - 0.045 12.1 0.0 0.069 11.4 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage T4-like capsid assembly protein (Gp20) TAXi_C PF14541.6 NODE_38601_length_546_cov_174.964775_g31258_i0forward_frame_3 - 0.058 13.2 0.0 0.083 12.7 0.0 1.3 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal DUF2973 PF11189.8 NODE_38592_length_546_cov_496.248532_g31249_i0reverse_frame_3 - 0.059 13.5 0.0 0.19 11.9 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) Insulin_TMD PF17870.1 NODE_38592_length_546_cov_496.248532_g31249_i0reverse_frame_3 - 0.74 9.9 3.8 13 6.0 1.0 2.6 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment CBFD_NFYB_HMF PF00808.23 NODE_38592_length_546_cov_496.248532_g31249_i0forward_frame_3 - 2.2e-18 66.3 1.3 4.1e-18 65.4 1.3 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 NODE_38592_length_546_cov_496.248532_g31249_i0forward_frame_3 - 1.3e-05 25.6 0.2 1.3e-05 25.6 0.2 2.0 2 0 0 2 2 2 1 Core histone H2A/H2B/H3/H4 Translin PF01997.16 NODE_38592_length_546_cov_496.248532_g31249_i0forward_frame_3 - 0.02 14.9 1.5 0.025 14.6 1.5 1.2 1 0 0 1 1 1 0 Translin family CENP-T_C PF15511.6 NODE_38592_length_546_cov_496.248532_g31249_i0forward_frame_3 - 0.025 14.7 0.0 0.039 14.1 0.0 1.3 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold TFIID-18kDa PF02269.16 NODE_38592_length_546_cov_496.248532_g31249_i0forward_frame_3 - 0.064 13.3 1.2 0.16 12.0 0.0 2.0 2 0 0 2 2 2 0 Transcription initiation factor IID, 18kD subunit LINES_C PF14695.6 NODE_38587_length_546_cov_6722.594912_g31244_i0reverse_frame_3 - 0.13 11.7 0.0 0.27 10.7 0.0 1.5 1 0 0 1 1 1 0 Lines C-terminus Ribosomal_S2 PF00318.20 ORF99763 - 0.048 12.9 2.1 0.13 11.5 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein S2 UPF0126 PF03458.13 ORF9883 - 1.5e-34 117.7 23.0 1.1e-20 73.3 7.8 2.5 3 0 0 3 3 3 2 UPF0126 domain AzlD PF05437.12 ORF9883 - 0.0099 16.0 1.3 0.0099 16.0 1.3 2.5 1 1 1 2 2 2 1 Branched-chain amino acid transport protein (AzlD) Cupin_8 PF13621.6 ORF98790 - 0.054 13.2 0.0 0.057 13.1 0.0 1.1 1 0 0 1 1 1 0 Cupin-like domain FAD_binding_3 PF01494.19 ORF98212 - 2.1e-09 37.1 0.0 2.4e-09 36.9 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF98212 - 0.00068 18.8 0.0 0.00073 18.7 0.0 1.1 1 0 0 1 1 1 1 Squalene epoxidase Lycopene_cycl PF05834.12 ORF98212 - 0.011 14.9 0.0 0.016 14.3 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein AAA_19 PF13245.6 ORF98212 - 0.092 13.1 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain Hpt PF01627.23 ORF98212 - 0.1 12.9 0.1 0.85 9.9 0.1 2.1 1 1 1 2 2 2 0 Hpt domain Abhydrolase_6 PF12697.7 ORF97778 - 0.017 15.7 0.1 0.021 15.5 0.1 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase family CGI-121 PF08617.10 ORF97715 - 2.8e-17 63.3 0.7 3.5e-17 63.0 0.7 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 Arf PF00025.21 ORF97669 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF97669 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF97669 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF97669 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF97669 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF97669 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF97669 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF97669 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase Complex1_49kDa PF00346.19 ORF96604 - 6.4e-39 133.7 0.0 8.7e-39 133.2 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DUF4119 PF13494.6 ORF95423 - 0.057 13.6 0.1 0.057 13.6 0.1 2.3 2 1 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF4119) Zip PF02535.22 ORF95423 - 0.06 12.5 0.0 0.071 12.3 0.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter SSURE PF11966.8 ORF95423 - 0.098 12.4 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Fibronectin-binding repeat PTPS PF01242.19 ORF94487 - 2.6e-08 33.9 0.0 3.3e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase YaeQ PF07152.12 ORF91927 - 1e-71 240.1 1.2 1.1e-71 239.9 1.2 1.0 1 0 0 1 1 1 1 YaeQ protein BRX PF08381.11 ORF91927 - 0.022 14.1 0.9 0.057 12.8 0.9 1.7 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 PAP2 PF01569.21 ORF91762 - 9.5e-05 22.2 7.9 0.00056 19.7 7.9 1.9 1 1 0 1 1 1 1 PAP2 superfamily DUF212 PF02681.14 ORF91762 - 0.00029 21.0 2.1 0.021 14.9 2.1 2.3 1 1 0 1 1 1 1 Divergent PAP2 family DUF2554 PF10829.8 ORF91750 - 0.022 15.1 0.0 0.039 14.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2554) DUF3828 PF12883.7 ORF9089 - 3.2e-08 34.0 4.1 0.00064 20.1 0.1 3.2 2 1 1 3 3 3 2 Protein of unknown function (DUF3828) DUF5071 PF16804.5 ORF9089 - 0.0022 18.2 0.0 0.0035 17.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5071) DUF4878 PF12870.7 ORF9089 - 0.076 13.3 0.1 0.17 12.2 0.0 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4878) DUF5485 PF17586.2 ORF90888 - 0.014 15.6 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5485) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks115.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks115.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks115.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks115.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- E1-E2_ATPase PF00122.20 ORF90028 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF90028 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) WD40 PF00400.32 ORF89911 - 5.3e-16 58.7 13.5 3.7e-06 27.6 0.1 4.8 5 0 0 5 5 5 4 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF89911 - 7.3e-08 31.7 0.3 0.0067 15.4 0.0 3.2 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 ORF89911 - 3.4e-06 27.3 0.0 0.097 13.0 0.0 3.5 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF89911 - 7.1e-06 25.8 0.9 0.29 11.1 0.1 3.2 3 0 0 3 3 3 2 WD40-like Beta Propeller Repeat eIF2A PF08662.11 ORF89911 - 0.021 14.7 0.0 0.13 12.1 0.0 1.9 1 1 1 2 2 2 0 Eukaryotic translation initiation factor eIF2A Cytochrom_D1 PF02239.16 ORF89911 - 0.037 12.6 0.0 0.039 12.5 0.0 1.2 1 0 0 1 1 1 0 Cytochrome D1 heme domain Proteasome_A_N PF10584.9 ORF89911 - 0.53 10.0 5.8 6.9 6.4 0.2 2.8 3 0 0 3 3 3 0 Proteasome subunit A N-terminal signature PAF-AH_p_II PF03403.13 ORF89640 - 0.018 13.6 0.0 0.023 13.2 0.0 1.2 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II E1-E2_ATPase PF00122.20 ORF89525 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF89525 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) E1-E2_ATPase PF00122.20 ORF88601 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF88601 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) Arf PF00025.21 ORF88235 - 2e-78 261.8 0.3 2.3e-78 261.6 0.3 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF88235 - 2.4e-14 53.6 0.0 3.4e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF88235 - 1.6e-13 50.5 0.0 2e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF88235 - 3.8e-13 49.3 0.0 4.4e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF88235 - 6.5e-12 45.3 0.4 9.5e-08 31.6 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF88235 - 3.3e-10 39.7 0.0 4.2e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF88235 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF88235 - 0.01 15.2 0.1 0.018 14.3 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF88235 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain GyrB_insert PF18053.1 ORF87081 - 0.077 12.9 13.1 0.34 10.8 1.7 2.0 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain Spike_NTD PF16451.5 ORF87081 - 0.081 12.3 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain Med10 PF09748.9 ORF87081 - 1.7 8.6 13.4 1.4 8.9 0.6 3.0 1 1 1 2 2 2 0 Transcription factor subunit Med10 of Mediator complex PDEase_I PF00233.19 ORF85136 - 3e-28 99.2 0.1 4.6e-28 98.5 0.1 1.3 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase E1_UFD PF09358.10 ORF85136 - 0.08 13.7 0.0 0.21 12.3 0.0 2.0 1 1 0 1 1 1 0 Ubiquitin fold domain Acetyltransf_1 PF00583.25 ORF837 - 1.3e-10 41.5 0.0 2.1e-10 40.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF837 - 3.4e-08 33.8 0.0 5e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF837 - 2.2e-06 27.8 0.0 3e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF837 - 0.0006 19.8 0.0 0.00098 19.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain MFS_1 PF07690.16 ORF8294 - 0.0017 17.4 17.8 0.002 17.1 17.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4006 PF13179.6 ORF8294 - 0.094 12.6 2.1 0.32 11.0 2.1 1.9 1 0 0 1 1 1 0 Family of unknown function (DUF4006) DEAD PF00270.29 ORF82430 - 3.3e-22 79.1 0.0 4.8e-22 78.6 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 ORF82430 - 0.014 15.4 0.1 0.035 14.1 0.0 1.6 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit Rieske_2 PF13806.6 ORF81588 - 0.11 12.4 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain UPRTase PF14681.6 ORF80366 - 1.1e-51 175.2 0.0 1.2e-51 175.1 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 ORF80366 - 0.00029 20.4 0.0 0.00033 20.2 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Complex1_49kDa PF00346.19 ORF80170 - 6.4e-39 133.7 0.0 8.7e-39 133.2 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UTRA PF07702.13 ORF80018 - 7.4e-36 123.1 0.2 9.1e-36 122.8 0.2 1.1 1 0 0 1 1 1 1 UTRA domain WD40 PF00400.32 ORF79522 - 0.13 13.1 0.0 1.7 9.7 0.0 2.7 2 0 0 2 2 2 0 WD domain, G-beta repeat Complex1_49kDa PF00346.19 ORF78878 - 6.4e-39 133.7 0.0 8.7e-39 133.2 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Peptidase_S51 PF03575.17 ORF77811 - 1.8e-13 50.6 0.0 3.7e-13 49.6 0.0 1.5 1 1 0 1 1 1 1 Peptidase family S51 CP_ATPgrasp_2 PF14403.6 ORF77811 - 0.17 10.8 0.1 0.23 10.3 0.1 1.1 1 0 0 1 1 1 0 Circularly permuted ATP-grasp type 2 Casc1_N PF15927.5 ORF77141 - 0.022 14.5 0.0 0.14 11.9 0.0 1.9 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus Es2 PF09751.9 ORF76821 - 2.3e-06 27.6 4.7 4.8e-06 26.6 4.7 1.5 1 1 0 1 1 1 1 Nuclear protein Es2 TruB_N PF01509.18 ORF76821 - 0.02 15.3 0.7 0.034 14.5 0.7 1.4 1 0 0 1 1 1 0 TruB family pseudouridylate synthase (N terminal domain) Arf PF00025.21 ORF75275 - 2.5e-74 248.5 0.2 3e-74 248.2 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF75275 - 7.2e-14 52.0 0.2 9.9e-14 51.6 0.2 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF75275 - 1.1e-13 51.0 0.0 1.3e-13 50.7 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF75275 - 2.9e-12 46.5 0.0 3.1e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF75275 - 3.2e-11 43.0 2.2 1.7e-07 30.8 0.2 2.1 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF75275 - 1.5e-09 37.6 0.0 1.8e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF75275 - 1.4e-05 25.2 0.1 2.3e-05 24.4 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_31 PF13614.6 ORF75275 - 0.041 13.8 0.0 0.05 13.5 0.0 1.3 1 1 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF75275 - 0.049 12.9 0.3 0.084 12.2 0.1 1.4 2 0 0 2 2 2 0 6-phosphofructo-2-kinase SRP54 PF00448.22 ORF75275 - 0.14 11.8 0.3 0.28 10.8 0.3 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain TOH_N PF12549.8 ORF74362 - 0.081 12.8 2.2 0.3 11.0 2.2 2.0 1 0 0 1 1 1 0 Tyrosine hydroxylase N terminal CDC73_C PF05179.14 ORF73226 - 1e-30 106.5 1.6 1.3e-30 106.1 1.6 1.1 1 0 0 1 1 1 1 RNA pol II accessory factor, Cdc73 family, C-terminal zf-RING_2 PF13639.6 ORF72701 - 7e-07 29.5 3.0 1.3e-06 28.6 3.0 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF72701 - 5.3e-05 22.9 5.0 0.00012 21.7 5.0 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF72701 - 9.2e-05 22.4 6.2 0.00017 21.5 6.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF72701 - 0.00011 22.1 2.5 0.00021 21.2 2.5 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF72701 - 0.00015 21.6 3.1 0.00037 20.3 3.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF72701 - 0.00016 21.4 1.3 0.00034 20.4 1.3 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF72701 - 0.0017 17.9 0.9 0.0031 17.1 0.9 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 ORF72701 - 0.061 13.6 3.4 0.24 11.7 3.4 2.1 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF72701 - 0.087 12.7 1.8 0.15 11.9 1.8 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF72701 - 0.096 12.7 0.9 0.17 12.0 0.9 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger PHD PF00628.29 ORF72701 - 0.17 11.8 4.8 0.08 12.8 1.9 2.1 2 1 0 2 2 2 0 PHD-finger Radical_SAM_N PF08497.10 ORF72701 - 0.26 10.5 1.5 0.39 9.9 1.5 1.2 1 0 0 1 1 1 0 Radical SAM N-terminal LCCL PF03815.19 ORF72541 - 1.4e-13 50.7 0.0 2.1e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 LCCL domain WD40 PF00400.32 ORF72446 - 1.8e-07 31.7 0.1 1.3e-05 25.8 0.2 3.1 3 0 0 3 3 3 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF72446 - 0.0014 18.9 0.1 3.8 7.9 0.0 3.1 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain SRX PF09201.10 ORF72446 - 0.034 14.0 0.4 0.11 12.3 0.0 2.0 1 1 1 2 2 2 0 SRX, signal recognition particle receptor alpha subunit STE PF02200.16 ORF72446 - 0.11 13.0 0.3 0.22 12.0 0.1 1.6 2 0 0 2 2 2 0 STE like transcription factor Ribosomal_S8e PF01201.22 ORF70592 - 4.9e-40 136.9 0.1 6.5e-40 136.5 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S8e SLT PF01464.20 ORF70194 - 1.1e-09 38.0 0.1 1.8e-09 37.2 0.1 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain Lysozyme_like PF13702.6 ORF70194 - 5.2e-05 23.0 0.1 0.00014 21.6 0.0 1.7 1 1 1 2 2 2 1 Lysozyme-like Macro PF01661.21 ORF69860 - 6.7e-09 35.8 0.0 4e-08 33.3 0.0 1.9 1 1 0 1 1 1 1 Macro domain Metallophos PF00149.28 ORF69783 - 0.0029 18.1 0.4 0.005 17.4 0.4 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF69783 - 0.053 14.4 0.6 0.11 13.3 0.6 1.5 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C zf-RING_11 PF17123.5 ORF68165 - 1.9e-06 27.5 3.2 1.9e-06 27.5 3.2 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF68165 - 0.00017 21.8 2.8 0.00017 21.8 2.8 1.8 2 0 0 2 2 2 1 Ring finger domain Shisa PF13908.6 ORF68165 - 0.015 15.6 0.1 0.015 15.6 0.1 1.5 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator Comm PF15957.5 ORF68165 - 0.075 13.4 0.1 0.12 12.8 0.1 1.4 1 1 0 1 1 1 0 Commissureless DUF3938 PF13074.6 ORF68165 - 0.11 12.7 2.0 0.17 12.1 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3938) Tetraspanin PF00335.20 ORF67941 - 0.0079 15.9 0.2 0.0086 15.8 0.2 1.2 1 0 0 1 1 1 1 Tetraspanin family zf-RING_2 PF13639.6 ORF6733 - 7e-07 29.5 3.0 1.3e-06 28.6 3.0 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF6733 - 5.3e-05 22.9 5.0 0.00012 21.7 5.0 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF6733 - 9.2e-05 22.4 6.2 0.00017 21.5 6.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF6733 - 0.00011 22.1 2.5 0.00021 21.2 2.5 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF6733 - 0.00015 21.6 3.1 0.00037 20.3 3.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF6733 - 0.00016 21.4 1.3 0.00034 20.4 1.3 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF6733 - 0.0017 17.9 0.9 0.0031 17.1 0.9 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 ORF6733 - 0.061 13.6 3.4 0.24 11.7 3.4 2.1 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF6733 - 0.087 12.7 1.8 0.15 11.9 1.8 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF6733 - 0.096 12.7 0.9 0.17 12.0 0.9 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger PHD PF00628.29 ORF6733 - 0.17 11.8 4.8 0.08 12.8 1.9 2.1 2 1 0 2 2 2 0 PHD-finger Radical_SAM_N PF08497.10 ORF6733 - 0.26 10.5 1.5 0.39 9.9 1.5 1.2 1 0 0 1 1 1 0 Radical SAM N-terminal WES_acyltransf PF03007.16 ORF66660 - 2e-09 37.6 0.0 2.7e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Band_7_1 PF13421.6 ORF66660 - 0.0057 16.4 0.1 0.007 16.1 0.1 1.3 1 1 0 1 1 1 1 SPFH domain-Band 7 family PDEase_II PF02112.15 ORF66660 - 0.033 13.3 0.1 0.043 12.9 0.1 1.2 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II Kelch_2 PF07646.15 ORF66660 - 0.062 13.3 0.1 0.37 10.8 0.0 2.3 2 1 0 2 2 2 0 Kelch motif Sel1 PF08238.12 ORF66414 - 3.2e-13 49.9 4.2 3.6e-05 24.3 0.0 4.5 4 1 0 4 4 4 3 Sel1 repeat TPR_2 PF07719.17 ORF66414 - 0.0048 16.9 0.5 1.1 9.5 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF66414 - 0.075 13.3 0.0 0.22 11.8 0.0 1.8 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 DUF1806 PF08830.10 ORF65808 - 0.016 15.1 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1806) Tetraspanin PF00335.20 ORF65082 - 0.0079 15.9 0.2 0.0086 15.8 0.2 1.2 1 0 0 1 1 1 1 Tetraspanin family DUF5485 PF17586.2 ORF62833 - 0.014 15.6 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5485) Ribosomal_L13 PF00572.18 ORF60110 - 3.5e-31 108.1 0.0 4.6e-31 107.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L13 DASH_Spc19 PF08287.11 ORF6 - 0.047 13.6 0.2 0.065 13.1 0.2 1.2 1 0 0 1 1 1 0 Spc19 FlaC_arch PF05377.11 ORF6 - 0.18 12.2 0.2 0.36 11.3 0.2 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) Ribosomal_L1 PF00687.21 ORF59951 - 1.4e-31 109.8 0.6 1.7e-31 109.5 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family TetR PF13972.6 ORF59951 - 0.077 12.7 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial transcriptional repressor Abhydrolase_4 PF08386.10 ORF59765 - 0.042 13.9 0.0 0.063 13.4 0.0 1.2 1 0 0 1 1 1 0 TAP-like protein Abhydrolase_1 PF00561.20 ORF59765 - 0.13 11.9 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold E1-E2_ATPase PF00122.20 ORF59208 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF59208 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) NusG PF02357.19 ORF58829 - 1.4e-27 96.0 0.0 2.1e-27 95.5 0.0 1.3 1 0 0 1 1 1 1 Transcription termination factor nusG KOW PF00467.29 ORF58829 - 1.6e-08 34.2 0.2 5.9e-08 32.4 0.1 2.0 2 0 0 2 2 2 1 KOW motif Glyco_transf_5 PF08323.11 ORF58333 - 0.098 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Starch synthase catalytic domain TcfC PF16967.5 ORF58333 - 0.11 12.0 0.0 3.6 7.2 0.0 2.2 2 0 0 2 2 2 0 E-set like domain Arf PF00025.21 ORF57927 - 2.5e-78 261.5 0.3 2.9e-78 261.3 0.3 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF57927 - 2.4e-14 53.6 0.0 3.4e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF57927 - 1.4e-13 50.7 0.0 1.7e-13 50.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF57927 - 2.7e-13 49.8 0.0 3.3e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF57927 - 6.5e-12 45.3 0.4 9.5e-08 31.6 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF57927 - 2.8e-10 40.0 0.0 3.6e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF57927 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF57927 - 0.0098 15.2 0.1 0.018 14.3 0.1 1.4 1 0 0 1 1 1 1 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF57927 - 0.017 15.3 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain Methyltransf_3 PF01596.17 ORF57245 - 2.8e-64 216.2 0.1 3.1e-64 216.1 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF57245 - 1.2e-12 48.8 0.0 1.7e-12 48.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF57245 - 8.3e-07 28.9 0.0 1.1e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF57245 - 0.00024 21.7 0.0 0.00037 21.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF57245 - 0.0019 18.0 0.0 0.0025 17.6 0.0 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 ORF57245 - 0.042 13.2 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF57245 - 0.043 13.8 0.0 0.17 11.8 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain CMAS PF02353.20 ORF57245 - 0.075 12.3 0.0 0.094 12.0 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 ORF57245 - 0.1 13.2 0.0 0.25 12.0 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain E1-E2_ATPase PF00122.20 ORF56912 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF56912 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) E1-E2_ATPase PF00122.20 ORF56380 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF56380 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) E1-E2_ATPase PF00122.20 ORF56241 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF56241 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) Nrap PF03813.14 ORF5621 - 0.018 15.1 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Nrap protein domain 1 PHO4 PF01384.20 ORF55956 - 0.47 9.5 1.7 0.69 8.9 1.7 1.4 1 1 0 1 1 1 0 Phosphate transporter family Gemini_mov PF01708.16 ORF55956 - 0.57 10.0 4.3 22 4.9 0.0 3.0 2 1 1 3 3 3 0 Geminivirus putative movement protein Complex1_49kDa PF00346.19 ORF51710 - 6.4e-39 133.7 0.0 8.7e-39 133.2 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TMEM247 PF15444.6 ORF48553 - 0.21 11.6 0.0 0.31 11.1 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 SeqA PF03925.13 ORF47740 - 3.4e-50 168.7 0.0 4.7e-50 168.2 0.0 1.2 1 0 0 1 1 1 1 SeqA protein C-terminal domain SeqA_N PF17206.3 ORF47740 - 4.5e-24 83.5 0.4 7.6e-24 82.7 0.4 1.4 1 0 0 1 1 1 1 SeqA protein N-terminal domain VAPB_antitox PF02697.14 ORF47740 - 0.011 16.5 0.3 0.039 14.7 0.2 2.0 1 1 0 1 1 1 0 Putative antitoxin Arf PF00025.21 ORF4713 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF4713 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF4713 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF4713 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF4713 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF4713 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF4713 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF4713 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase FG-GAP PF01839.23 ORF46951 - 2.4e-08 33.9 1.1 0.0016 18.6 0.0 2.4 2 0 0 2 2 2 2 FG-GAP repeat VCBS PF13517.6 ORF46951 - 6.8e-08 33.0 3.1 0.0023 18.5 1.1 2.4 2 0 0 2 2 2 2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella DUF1445 PF07286.12 ORF46795 - 7.4e-63 210.8 0.0 8.6e-63 210.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1445) Arf PF00025.21 ORF46316 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF46316 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF46316 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF46316 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF46316 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF46316 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF46316 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF46316 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase Arf PF00025.21 ORF46112 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF46112 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF46112 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF46112 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF46112 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF46112 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF46112 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF46112 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase SET PF00856.28 ORF44586 - 6.5e-09 36.4 0.8 1.6e-08 35.1 0.3 1.8 2 0 0 2 2 2 1 SET domain IL28A PF15177.6 ORF44586 - 0.021 14.7 0.1 0.2 11.5 0.1 2.1 1 1 1 2 2 2 0 Interleukin-28A Lipase_chap PF03280.14 ORF44586 - 0.031 14.3 0.4 0.049 13.6 0.4 1.3 1 0 0 1 1 1 0 Proteobacterial lipase chaperone protein RWD PF05773.22 ORF44586 - 0.087 13.1 0.0 0.2 11.9 0.0 1.8 1 1 0 1 1 1 0 RWD domain DUF1476 PF07345.11 ORF43098 - 0.0099 16.2 0.4 0.021 15.2 0.4 1.6 1 0 0 1 1 1 1 ATPase inhibitor subunit zeta Med8 PF10232.9 ORF43098 - 0.024 14.2 0.1 0.035 13.7 0.1 1.2 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 RuvB_N PF05496.12 ORF43098 - 0.11 12.3 0.3 0.18 11.6 0.3 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain sCache_2 PF17200.4 ORF43098 - 0.26 11.1 2.4 0.68 9.8 0.2 2.0 1 1 1 2 2 2 0 Single Cache domain 2 Pet100 PF09803.9 ORF42539 - 1.4 9.5 5.2 2.9 8.5 0.6 2.4 2 0 0 2 2 2 0 Pet100 Apolipoprotein PF01442.18 ORF42443 - 0.0084 16.0 2.1 0.013 15.4 2.1 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain TPR_MLP1_2 PF07926.12 ORF42443 - 0.014 15.4 0.5 0.024 14.7 0.5 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein TolA_bind_tri PF16331.5 ORF42443 - 0.021 14.9 1.2 0.04 14.0 1.2 1.5 1 0 0 1 1 1 0 TolA binding protein trimerisation IKBKB_SDD PF18397.1 ORF42443 - 0.033 13.5 0.1 0.046 13.0 0.1 1.1 1 0 0 1 1 1 0 IQBAL scaffold dimerization domain COMP PF11598.8 ORF42443 - 0.034 14.6 2.6 3 8.4 0.0 2.2 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein HIP1_clath_bdg PF16515.5 ORF42443 - 0.11 13.2 2.7 0.22 12.2 2.6 1.5 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 PhaP_Bmeg PF09602.10 ORF42443 - 0.14 12.1 0.5 0.19 11.7 0.5 1.2 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) Nrap PF03813.14 ORF40315 - 0.018 15.1 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Nrap protein domain 1 GyrB_insert PF18053.1 ORF40212 - 0.077 12.9 13.1 0.34 10.8 1.7 2.0 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain Spike_NTD PF16451.5 ORF40212 - 0.081 12.3 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain Med10 PF09748.9 ORF40212 - 1.7 8.6 13.4 1.4 8.9 0.6 3.0 1 1 1 2 2 2 0 Transcription factor subunit Med10 of Mediator complex TMEM154 PF15102.6 ORF40007 - 0.0005 20.0 1.7 0.0005 20.0 1.7 1.5 1 1 0 1 1 1 1 TMEM154 protein family PMP1_2 PF08114.11 ORF40007 - 0.055 13.2 2.2 0.1 12.4 2.2 1.4 1 0 0 1 1 1 0 ATPase proteolipid family DUF4500 PF14937.6 ORF40007 - 0.071 13.1 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4500) Podoplanin PF05808.11 ORF40007 - 0.18 11.9 7.9 0.16 12.0 6.6 1.8 1 1 1 2 2 2 0 Podoplanin Claudin_2 PF13903.6 ORF40007 - 0.48 10.2 2.7 1.7 8.4 2.6 1.9 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF4834 PF16118.5 ORF40007 - 2.7 9.0 7.3 3.8 8.5 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4834) gpUL132 PF11359.8 ORF40007 - 5 6.6 9.5 0.15 11.6 3.6 1.5 2 0 0 2 2 2 0 Glycoprotein UL132 adh_short PF00106.25 ORF39812 - 4.1e-16 59.0 0.0 5.3e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF39812 - 7.2e-10 38.8 0.0 8.5e-10 38.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.10 ORF39812 - 0.0034 16.8 0.1 0.0043 16.5 0.1 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) DUF4056 PF13265.6 ORF37113 - 0.068 12.5 0.0 0.23 10.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4056) Arch_flagellin PF01917.16 ORF34503 - 0.16 12.1 0.1 15 5.8 0.0 2.1 2 0 0 2 2 2 0 Archaebacterial flagellin PS-DH PF14765.6 ORF34353 - 1.4e-14 54.0 0.4 1.9e-14 53.6 0.4 1.0 1 0 0 1 1 1 1 Polyketide synthase dehydratase TB2_DP1_HVA22 PF03134.19 ORF34036 - 8.3e-13 48.1 7.0 1.5e-12 47.3 7.0 1.4 1 0 0 1 1 1 1 TB2/DP1, HVA22 family Pho86 PF11124.8 ORF34036 - 0.029 13.8 3.7 0.041 13.4 3.7 1.1 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 RCC1_2 PF13540.6 ORF33660 - 9.2e-07 28.5 5.8 0.9 9.4 0.0 4.2 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat AFP_2 PF18815.1 ORF33660 - 0.037 14.3 1.5 2.6 8.3 0.1 3.1 2 1 1 3 3 3 0 Bacterial antifreeze protein repeat Spectrin PF00435.21 ORF33660 - 0.044 14.3 0.2 2.6 8.6 0.1 2.8 2 1 1 3 3 3 0 Spectrin repeat Ank_5 PF13857.6 ORF33110 - 9.6e-19 67.2 0.1 1.4e-08 34.8 0.0 2.8 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF33110 - 1.1e-17 64.1 0.0 7.5e-06 26.4 0.0 3.5 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF33110 - 1.5e-16 60.7 0.0 3.5e-08 33.9 0.0 2.8 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF33110 - 2.3e-14 53.1 0.0 0.00022 21.5 0.0 4.2 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 ORF33110 - 1.5e-13 49.6 0.0 0.00014 22.0 0.0 4.3 4 0 0 4 4 4 3 Ankyrin repeat Pre-PUA PF17832.1 ORF33011 - 1.9e-19 70.1 0.5 2.6e-19 69.7 0.5 1.2 1 0 0 1 1 1 1 Pre-PUA-like domain PUA PF01472.20 ORF33011 - 4.5e-14 52.2 2.0 6.8e-14 51.6 2.0 1.3 1 0 0 1 1 1 1 PUA domain DUF1947 PF09183.10 ORF33011 - 0.0022 18.3 0.1 0.0045 17.2 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) GyrB_insert PF18053.1 ORF32359 - 0.077 12.9 13.1 0.34 10.8 1.7 2.0 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain Spike_NTD PF16451.5 ORF32359 - 0.081 12.3 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain Med10 PF09748.9 ORF32359 - 1.7 8.6 13.4 1.4 8.9 0.6 3.0 1 1 1 2 2 2 0 Transcription factor subunit Med10 of Mediator complex FKBP_C PF00254.28 ORF32184 - 5.4e-09 36.3 0.0 1.3e-08 35.1 0.0 1.7 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF4882 PF16223.5 ORF32184 - 0.17 11.0 0.0 0.21 10.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4882) ADP_ribosyl_GH PF03747.14 ORF31349 - 1.2e-09 38.4 0.6 1.8e-09 37.8 0.1 1.5 2 0 0 2 2 2 1 ADP-ribosylglycohydrolase WXG100 PF06013.12 ORF31349 - 0.011 16.0 0.9 3.6 7.9 0.5 2.3 2 0 0 2 2 2 0 Proteins of 100 residues with WXG SKIP_SNW PF02731.15 ORF31349 - 0.016 14.9 1.8 0.025 14.3 1.8 1.2 1 0 0 1 1 1 0 SKIP/SNW domain PIN_8 PF18476.1 ORF31349 - 0.016 15.1 0.7 0.022 14.6 0.7 1.1 1 0 0 1 1 1 0 PIN like domain CSN5_C PF18323.1 ORF31349 - 0.38 11.7 3.2 0.34 11.8 1.5 1.7 2 0 0 2 2 2 0 Cop9 signalosome subunit 5 C-terminal domain Ras PF00071.22 ORF29576 - 5.9e-38 130.0 0.4 6.8e-38 129.8 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF29576 - 1.3e-19 70.5 0.1 2.6e-19 69.6 0.0 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF29576 - 2.5e-15 56.3 0.2 2.8e-15 56.2 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF29576 - 2.8e-06 27.4 0.0 5e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF29576 - 0.00014 21.4 1.2 0.0003 20.4 1.2 1.6 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF29576 - 0.00015 21.4 1.3 0.0026 17.3 0.4 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF29576 - 0.0002 20.8 0.5 0.00025 20.5 0.5 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region AEP1 PF17049.5 ORF29576 - 0.0048 16.0 0.1 0.0056 15.8 0.1 1.1 1 0 0 1 1 1 1 ATPase expression protein 1 RsgA_GTPase PF03193.16 ORF29576 - 0.028 14.3 0.4 3.2 7.6 0.1 2.3 2 1 0 2 2 2 0 RsgA GTPase AAA PF00004.29 ORF29576 - 0.029 14.8 0.3 0.35 11.3 0.0 2.3 2 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 ORF29576 - 0.053 13.3 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 ORF29576 - 0.1 13.2 0.1 0.18 12.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain DUF4253 PF14062.6 ORF29576 - 0.13 12.5 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) cwf18 PF08315.12 ORF29003 - 0.019 15.6 10.6 0.023 15.4 10.6 1.3 1 0 0 1 1 1 0 cwf18 pre-mRNA splicing factor ECH_1 PF00378.20 ORF25545 - 7.7e-23 81.1 0.1 8.8e-23 80.9 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF25545 - 1.9e-08 34.2 0.0 2.2e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase FixP_N PF14715.6 ORF2464 - 0.02 14.6 0.7 0.063 13.0 0.7 1.8 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP HPP PF04982.13 ORF2464 - 0.03 14.5 1.5 0.13 12.5 1.3 2.0 1 1 0 1 1 1 0 HPP family TrfA PF07042.11 ORF2464 - 0.19 10.7 0.1 0.28 10.2 0.1 1.2 1 0 0 1 1 1 0 TrfA protein MFS_1 PF07690.16 ORF24594 - 1.6e-07 30.6 9.4 2e-07 30.2 9.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily BT1 PF03092.16 ORF24594 - 0.00039 18.8 12.5 0.0061 14.9 2.8 2.9 1 1 1 3 3 3 3 BT1 family FtsK_4TM PF13491.6 ORF24594 - 0.012 15.3 3.9 0.1 12.3 0.2 2.2 2 0 0 2 2 2 0 4TM region of DNA translocase FtsK/SpoIIIE EI24 PF07264.11 ORF24594 - 0.013 15.8 3.7 0.013 15.8 3.7 2.1 1 1 1 2 2 2 0 Etoposide-induced protein 2.4 (EI24) MFS_1_like PF12832.7 ORF24594 - 0.08 11.8 11.2 0.1 11.4 11.2 1.1 1 0 0 1 1 1 0 MFS_1 like family TMEM126 PF07114.11 ORF24594 - 0.16 11.4 2.9 0.48 9.8 0.2 2.5 1 1 1 2 2 2 0 Transmembrane protein 126 zf-RING_11 PF17123.5 ORF24411 - 1.9e-06 27.5 3.2 1.9e-06 27.5 3.2 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF24411 - 0.00017 21.8 2.8 0.00017 21.8 2.8 1.8 2 0 0 2 2 2 1 Ring finger domain Shisa PF13908.6 ORF24411 - 0.015 15.6 0.1 0.015 15.6 0.1 1.5 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator Comm PF15957.5 ORF24411 - 0.074 13.4 0.1 0.12 12.8 0.1 1.4 1 1 0 1 1 1 0 Commissureless DUF3938 PF13074.6 ORF24411 - 0.078 13.2 1.9 0.12 12.7 1.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3938) ICE2 PF08426.10 ORF24411 - 0.22 10.6 4.3 0.26 10.3 3.8 1.4 1 1 0 1 1 1 0 ICE2 Arf PF00025.21 ORF23813 - 4e-78 260.8 0.2 4.6e-78 260.7 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF23813 - 1.8e-14 54.0 0.0 2.5e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF23813 - 1.4e-13 50.7 0.0 1.7e-13 50.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF23813 - 4.3e-13 49.2 0.0 4.9e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF23813 - 1.9e-11 43.7 0.4 2.5e-07 30.2 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF23813 - 3.9e-10 39.5 0.0 5.3e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF23813 - 1.3e-05 25.2 0.0 2.1e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF23813 - 0.011 15.0 0.1 0.02 14.2 0.1 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF23813 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain RCDG1 PF15725.5 ORF23600 - 0.31 11.5 4.3 0.99 9.9 0.4 2.5 2 0 0 2 2 2 0 Renal cancer differentiation gene 1 protein Ank_4 PF13637.6 ORF23161 - 1.1e-35 121.5 5.3 1.5e-09 38.2 0.1 4.1 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF23161 - 8.8e-34 115.9 0.6 1.2e-16 61.0 0.1 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF23161 - 9.4e-29 99.1 3.3 2.9e-10 40.2 0.1 4.5 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF23161 - 1.4e-26 91.7 5.4 9.8e-06 25.8 0.0 6.0 6 0 0 6 6 6 5 Ankyrin repeat Ank_3 PF13606.6 ORF23161 - 2.6e-22 76.5 0.5 0.00081 19.7 0.0 6.1 6 0 0 6 6 6 6 Ankyrin repeat DUF2554 PF10829.8 ORF22942 - 0.022 15.1 0.0 0.039 14.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2554) DUF5595 PF18077.1 ORF21845 - 0.43 10.7 2.7 0.75 9.9 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5595) DUF3280 PF11684.8 ORF21845 - 1.3 9.4 5.6 0.21 12.0 1.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2380) His_Phos_2 PF00328.22 ORF21676 - 5.3e-05 22.7 0.0 6.3e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Arf PF00025.21 ORF20358 - 1.6e-77 258.9 0.2 1.8e-77 258.7 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF20358 - 2.1e-14 53.7 0.0 3e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF20358 - 1.1e-13 51.0 0.0 1.3e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF20358 - 5.6e-13 48.8 0.0 6.4e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF20358 - 1.5e-11 44.1 0.3 2.2e-07 30.4 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF20358 - 1.6e-09 37.5 0.0 2.2e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF20358 - 3.2e-05 24.0 0.0 5e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF20358 - 0.011 15.0 0.0 0.02 14.2 0.0 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF20358 - 0.025 14.7 0.0 0.042 14.0 0.0 1.3 1 1 0 1 1 1 0 AAA domain Ribosomal_L24e PF01246.20 ORF19688 - 0.023 14.9 2.0 0.023 14.9 2.0 2.2 2 1 0 2 2 2 0 Ribosomal protein L24e Peptidase_S46 PF10459.9 ORF19688 - 0.12 11.0 8.8 0.13 10.9 8.8 1.0 1 0 0 1 1 1 0 Peptidase S46 Arf PF00025.21 ORF19061 - 1.8e-74 249.0 0.0 2.1e-74 248.8 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF19061 - 2.9e-15 56.5 0.1 3.9e-15 56.1 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF19061 - 1.3e-14 54.1 0.0 1.5e-14 53.8 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF19061 - 7.8e-13 48.3 1.2 8e-09 35.1 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 ORF19061 - 1.5e-12 47.4 0.0 1.8e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 ORF19061 - 1.6e-10 40.8 0.0 2e-10 40.5 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF19061 - 1.8e-06 28.0 0.1 2.6e-06 27.5 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF19061 - 0.0029 16.9 0.4 0.0072 15.7 0.1 1.6 1 1 1 2 2 2 1 6-phosphofructo-2-kinase cobW PF02492.19 ORF19061 - 0.15 11.6 0.1 1.4 8.5 0.0 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Pet100 PF09803.9 ORF18606 - 1.4 9.5 5.2 2.9 8.5 0.6 2.4 2 0 0 2 2 2 0 Pet100 Acid_PPase PF12689.7 ORF18516 - 8.9e-37 126.5 0.0 1e-36 126.4 0.0 1.0 1 0 0 1 1 1 1 Acid Phosphatase PyrBI_leader PF08052.11 ORF18516 - 0.0081 16.1 0.0 0.47 10.4 0.0 2.4 2 0 0 2 2 2 1 PyrBI operon leader peptide Aminoglyc_resit PF10706.9 ORF18516 - 0.18 11.5 0.0 0.31 10.7 0.0 1.3 1 0 0 1 1 1 0 Aminoglycoside-2''-adenylyltransferase SpoVS PF04232.12 ORF18388 - 0.00019 21.1 0.3 0.0052 16.5 0.0 2.2 2 0 0 2 2 2 2 Stage V sporulation protein S (SpoVS) Arf PF00025.21 ORF17780 - 2e-78 261.8 0.3 2.3e-78 261.6 0.3 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF17780 - 2.4e-14 53.6 0.0 3.4e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF17780 - 1.6e-13 50.5 0.0 2e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF17780 - 3.8e-13 49.3 0.0 4.4e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF17780 - 6.5e-12 45.3 0.4 9.5e-08 31.6 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF17780 - 3.3e-10 39.7 0.0 4.2e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF17780 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF17780 - 0.01 15.2 0.1 0.018 14.3 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF17780 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain UPF0242 PF06785.11 ORF17630 - 0.18 11.9 7.3 0.23 11.6 7.3 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMEM51 PF15345.6 ORF17630 - 1.8 8.4 11.2 0.11 12.3 5.7 1.7 2 0 0 2 2 2 0 Transmembrane protein 51 MFS_1 PF07690.16 ORF167 - 1.6e-07 30.6 9.4 2e-07 30.2 9.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily BT1 PF03092.16 ORF167 - 0.00039 18.8 12.5 0.0061 14.9 2.8 2.9 1 1 1 3 3 3 3 BT1 family FtsK_4TM PF13491.6 ORF167 - 0.012 15.3 3.9 0.1 12.3 0.2 2.2 2 0 0 2 2 2 0 4TM region of DNA translocase FtsK/SpoIIIE EI24 PF07264.11 ORF167 - 0.013 15.8 3.7 0.013 15.8 3.7 2.1 1 1 1 2 2 2 0 Etoposide-induced protein 2.4 (EI24) MFS_1_like PF12832.7 ORF167 - 0.08 11.8 11.2 0.1 11.4 11.2 1.1 1 0 0 1 1 1 0 MFS_1 like family TMEM126 PF07114.11 ORF167 - 0.16 11.4 2.9 0.48 9.8 0.2 2.5 1 1 1 2 2 2 0 Transmembrane protein 126 Ribosomal_L22 PF00237.19 ORF15119 - 5.5e-30 103.7 0.7 5.5e-30 103.7 0.7 1.5 2 0 0 2 2 2 1 Ribosomal protein L22p/L17e Ribosomal_L22 PF00237.19 ORF14230 - 3.2e-30 104.4 0.7 5.5e-30 103.7 0.7 1.4 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Pkinase PF00069.25 ORF1401 - 0.046 13.1 0.1 0.38 10.1 0.1 1.9 1 1 0 1 1 1 0 Protein kinase domain E1-E2_ATPase PF00122.20 ORF13184 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF13184 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) TPT PF03151.16 ORF12835 - 0.004 16.6 8.0 0.0047 16.3 8.0 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF12835 - 0.0047 17.1 5.4 0.0047 17.1 5.4 1.8 2 0 0 2 2 2 1 EamA-like transporter family FG-GAP PF01839.23 ORF12633 - 2.4e-08 33.9 1.1 0.0016 18.6 0.0 2.4 2 0 0 2 2 2 2 FG-GAP repeat VCBS PF13517.6 ORF12633 - 6.8e-08 33.0 3.1 0.0023 18.5 1.1 2.4 2 0 0 2 2 2 2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella Cyt-b5 PF00173.28 ORF11530 - 9.4e-14 51.3 0.0 1.7e-13 50.5 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain HGTP_anticodon PF03129.20 ORF111 - 3e-10 40.1 0.0 5.1e-10 39.4 0.0 1.4 1 0 0 1 1 1 1 Anticodon binding domain TIR_2 PF13676.6 ORF111 - 0.041 14.5 0.1 0.075 13.6 0.1 1.5 1 0 0 1 1 1 0 TIR domain E1-E2_ATPase PF00122.20 ORF110660 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF110660 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) Xan_ur_permease PF00860.20 ORF10988 - 0.00047 19.0 1.7 0.00081 18.2 0.2 1.8 1 1 1 2 2 2 1 Permease family Glycos_transf_1 PF00534.20 ORF109541 - 7.3e-29 100.5 0.0 8.4e-29 100.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF109541 - 8.2e-16 58.7 0.0 1.2e-15 58.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF109541 - 0.00073 19.9 0.0 0.0011 19.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF3267 PF11667.8 ORF109049 - 4 7.8 7.7 0.71 10.2 2.4 2.3 2 1 0 2 2 2 0 Putative zincin peptidase Complex1_49kDa PF00346.19 ORF108846 - 6.4e-39 133.7 0.0 8.7e-39 133.2 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sugar_tr PF00083.24 ORF108750 - 1.3e-16 60.5 8.0 1.6e-16 60.3 8.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF108750 - 7.2e-12 44.9 3.4 8.2e-12 44.7 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily B9-C2 PF07162.11 ORF108750 - 0.05 13.8 0.0 0.077 13.2 0.0 1.2 1 0 0 1 1 1 0 Ciliary basal body-associated, B9 protein MFS_1_like PF12832.7 ORF108750 - 0.25 10.1 5.6 0.33 9.8 5.6 1.2 1 0 0 1 1 1 0 MFS_1 like family Aa_trans PF01490.18 ORF108586 - 0.0065 15.2 0.3 0.0088 14.8 0.3 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein E1-E2_ATPase PF00122.20 ORF108301 - 7.6e-18 64.7 0.1 7.6e-18 64.7 0.1 2.0 2 0 0 2 2 2 1 E1-E2 ATPase DUF3021 PF11457.8 ORF108301 - 0.048 14.0 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) FHA PF00498.26 ORF107560 - 1.5e-17 63.7 0.0 2.7e-17 62.9 0.0 1.5 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF107560 - 3.5e-06 27.3 0.0 0.00011 22.5 0.0 2.2 1 1 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Dickkopf_N PF04706.12 ORF107233 - 0.0044 17.5 12.2 0.0044 17.5 12.2 3.1 2 2 2 4 4 4 1 Dickkopf N-terminal cysteine-rich region Arf PF00025.21 ORF107110 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF107110 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF107110 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF107110 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF107110 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF107110 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF107110 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF107110 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase Abhydrolase_4 PF08386.10 ORF106506 - 0.042 13.9 0.0 0.063 13.4 0.0 1.2 1 0 0 1 1 1 0 TAP-like protein Abhydrolase_1 PF00561.20 ORF106506 - 0.13 11.9 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold Arf PF00025.21 ORF106289 - 1.8e-78 262.0 0.2 2e-78 261.8 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF106289 - 2.4e-14 53.6 0.0 3.4e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF106289 - 1.6e-13 50.5 0.0 2e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF106289 - 3.8e-13 49.3 0.0 4.4e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF106289 - 7.9e-12 45.0 0.4 1e-07 31.5 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF106289 - 3.1e-10 39.8 0.0 4.2e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF106289 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF106289 - 0.011 15.1 0.1 0.019 14.2 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF106289 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain ASL_C PF08328.11 ORF105497 - 6e-44 148.8 0.0 7.6e-44 148.5 0.0 1.1 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal Lyase_1 PF00206.20 ORF105497 - 3.5e-08 33.2 0.1 7.1e-08 32.2 0.0 1.5 2 0 0 2 2 2 1 Lyase Ribosomal_S2 PF00318.20 ORF104811 - 0.048 12.9 2.1 0.13 11.5 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein S2 Methyltransf_3 PF01596.17 ORF103573 - 7.7e-64 214.8 0.1 8.5e-64 214.6 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF103573 - 1.3e-12 48.6 0.0 1.8e-12 48.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF103573 - 7.2e-07 29.1 0.0 9e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF103573 - 0.00014 22.5 0.0 0.0002 22.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF103573 - 0.0016 18.2 0.0 0.0023 17.7 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 ORF103573 - 0.018 14.4 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF103573 - 0.02 14.2 0.0 0.025 13.9 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.7 ORF103573 - 0.034 14.1 0.0 0.17 11.8 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF103573 - 0.062 14.0 0.0 0.13 12.9 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain Peptidase_S24 PF00717.23 ORF101740 - 3.8e-10 39.6 0.1 6e-10 38.9 0.1 1.3 1 0 0 1 1 1 1 Peptidase S24-like NiFeSe_Hases PF00374.19 NODE_39026_length_538_cov_3.361829_g31649_i0reverse_frame_1 - 5.1e-39 134.5 0.3 6.2e-39 134.2 0.3 1.1 1 0 0 1 1 1 1 Nickel-dependent hydrogenase DUF1218 PF06749.12 NODE_39026_length_538_cov_3.361829_g31649_i0forward_frame_1 - 0.013 16.0 1.8 0.022 15.3 1.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) HTH_Tnp_IS1 PF12759.7 NODE_39022_length_538_cov_4.560636_g31645_i0reverse_frame_1 - 2.7e-21 74.9 0.9 4.6e-21 74.2 0.9 1.4 1 0 0 1 1 1 1 InsA C-terminal domain Inh PF02974.14 NODE_39010_length_538_cov_94.540755_g31633_i0reverse_frame_1 - 0.096 12.8 0.2 0.41 10.8 0.0 1.9 2 0 0 2 2 2 0 Protease inhibitor Inh ENOD93 PF03386.14 NODE_39006_length_538_cov_117.226640_g31629_i0forward_frame_1 - 0.22 11.4 1.4 0.3 11.0 0.7 1.5 2 0 0 2 2 2 0 Early nodulin 93 ENOD93 protein RhoGEF67_u1 PF16615.5 NODE_39005_length_538_cov_119.174950_g31628_i0reverse_frame_1 - 0.095 13.2 5.3 0.24 11.9 0.0 3.0 3 0 0 3 3 3 0 Unstructured region one on RhoGEF 6 and 7 Corona_5a PF06336.11 NODE_39005_length_538_cov_119.174950_g31628_i0reverse_frame_1 - 0.13 12.3 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Coronavirus 5a protein Gram_pos_anchor PF00746.21 NODE_39002_length_538_cov_156.514911_g31625_i0reverse_frame_1 - 1.2 9.1 11.4 2.8 8.0 1.6 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif GAPT PF11770.8 NODE_39002_length_538_cov_156.514911_g31625_i0reverse_frame_1 - 5.5 6.8 5.7 0.55 10.1 0.5 1.8 1 1 1 2 2 2 0 GRB2-binding adapter (GAPT) CIA30 PF08547.12 NODE_38981_length_538_cov_1170.677932_g12687_i4reverse_frame_1 - 0.0015 18.6 0.0 0.0021 18.1 0.0 1.2 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) LisH_TPL PF17814.1 NODE_38974_length_539_cov_1.940476_g31603_i0reverse_frame_1 - 0.092 12.4 0.8 0.23 11.1 0.3 1.8 2 0 0 2 2 2 0 LisH-like dimerisation domain F-box PF00646.33 NODE_38964_length_539_cov_70.527778_g31593_i0reverse_frame_1 - 1.2e-05 25.1 0.1 2.1e-05 24.3 0.1 1.5 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 NODE_38964_length_539_cov_70.527778_g31593_i0reverse_frame_1 - 0.00058 19.7 0.0 0.0017 18.2 0.0 1.7 2 0 0 2 2 2 1 F-box-like RNA_pol_Rpb1_5 PF04998.17 NODE_38964_length_539_cov_70.527778_g31593_i0reverse_frame_1 - 0.044 13.2 0.8 0.055 12.9 0.8 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 Herpes_U15 PF05613.11 NODE_38964_length_539_cov_70.527778_g31593_i0forward_frame_1 - 0.0054 17.4 3.3 0.0071 17.0 2.3 1.7 1 1 0 1 1 1 1 Human herpesvirus U15 protein Histone_H2A_C PF16211.5 NODE_38957_length_539_cov_97.591270_g31586_i0forward_frame_1 - 7.8e-09 35.1 0.0 7.8e-09 35.1 0.0 2.0 2 0 0 2 2 2 1 C-terminus of histone H2A zf-HC5HC2H PF13771.6 NODE_38934_length_539_cov_690.886905_g29335_i1forward_frame_1 - 0.015 15.5 3.2 0.027 14.7 3.2 1.3 1 0 0 1 1 1 0 PHD-like zinc-binding domain DUF3078 PF11276.8 NODE_38918_length_540_cov_9.116832_g31556_i0forward_frame_1 - 0.041 14.3 0.2 0.061 13.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3078) Cortexin PF11057.8 NODE_38918_length_540_cov_9.116832_g31556_i0forward_frame_1 - 0.67 9.8 7.2 1.1 9.2 1.0 2.4 2 0 0 2 2 2 0 Cortexin of kidney UL41A PF17591.2 NODE_38912_length_540_cov_62.099010_g31550_i0reverse_frame_1 - 0.12 12.5 0.7 0.29 11.3 0.7 1.6 1 0 0 1 1 1 0 Herpesvirus UL41A Abhydro_lipase PF04083.16 NODE_38877_length_540_cov_1304.190099_g31519_i0reverse_frame_1 - 6.8e-18 64.0 0.1 1.4e-17 63.0 0.1 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_38877_length_540_cov_1304.190099_g31519_i0reverse_frame_1 - 3.8e-07 30.0 0.1 4.5e-07 29.8 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold FAST_1 PF06743.15 NODE_38856_length_541_cov_75.306324_g31500_i0forward_frame_2 - 0.016 15.2 0.0 0.96 9.4 0.0 2.8 2 1 1 3 3 3 0 FAST kinase-like protein, subdomain 1 DSHCT PF08148.12 NODE_38853_length_541_cov_89.837945_g31497_i0forward_frame_3 - 0.048 13.3 0.1 0.07 12.8 0.1 1.3 1 1 0 1 1 1 0 DSHCT (NUC185) domain O-antigen_lig PF13425.6 NODE_38853_length_541_cov_89.837945_g31497_i0forward_frame_3 - 8.6 5.0 5.9 10 4.8 5.9 1.3 1 0 0 1 1 1 0 O-antigen ligase like membrane protein zf-4CXXC_R1 PF10497.9 NODE_38850_length_541_cov_116.920949_g31494_i0reverse_frame_3 - 0.45 10.8 7.1 0.96 9.7 7.1 1.6 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 SH3_10 PF17902.1 NODE_38849_length_541_cov_119.405138_g31493_i0reverse_frame_2 - 0.071 13.2 0.0 0.17 12.0 0.0 1.7 1 0 0 1 1 1 0 SH3 domain Gmad2 PF10648.9 NODE_38841_length_541_cov_764.942688_g31485_i0forward_frame_3 - 0.099 12.9 0.0 0.49 10.7 0.0 1.8 2 0 0 2 2 2 0 Immunoglobulin-like domain of bacterial spore germination Peptidase_C1 PF00112.23 NODE_38835_length_541_cov_273250.950593_g31479_i0forward_frame_3 - 3.8e-26 92.5 0.2 4.9e-26 92.2 0.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 NODE_38835_length_541_cov_273250.950593_g31479_i0forward_frame_3 - 0.00057 19.7 0.0 0.0022 17.9 0.0 1.9 2 1 0 2 2 2 1 Peptidase family C1 propeptide Flg_bb_rod PF00460.20 NODE_38826_length_542_cov_3.751479_g31471_i0forward_frame_2 - 2.6e-14 52.8 1.2 5.5e-14 51.7 1.2 1.6 1 0 0 1 1 1 1 Flagella basal body rod protein OmpH PF03938.14 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.0035 17.7 8.9 0.0057 17.0 8.9 1.3 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) DUF4456 PF14644.6 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.013 15.2 4.1 0.021 14.5 4.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4456) DUF3323 PF11796.8 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.014 15.3 2.7 0.021 14.7 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) FUSC PF04632.12 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.017 13.7 2.8 0.019 13.5 2.8 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family T2SSF PF00482.23 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.02 14.8 2.5 0.033 14.1 2.5 1.5 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F DinB_2 PF12867.7 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.023 15.2 0.4 0.38 11.3 0.1 2.4 1 1 2 3 3 3 0 DinB superfamily Dak2 PF02734.17 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.061 13.2 5.5 0.088 12.7 5.5 1.2 1 0 0 1 1 1 0 DAK2 domain DUF4795 PF16043.5 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.071 12.7 2.0 0.098 12.3 2.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) ApoLp-III PF07464.11 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.087 12.9 8.4 0.13 12.3 8.4 1.3 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Tweety PF04906.13 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.12 11.1 2.6 0.96 8.0 0.4 1.8 1 1 1 2 2 2 0 Tweety MnmE_helical PF12631.7 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.13 12.5 3.0 0.16 12.1 3.0 1.2 1 0 0 1 1 1 0 MnmE helical domain Pex19 PF04614.12 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.13 12.0 6.9 0.17 11.6 6.9 1.1 1 0 0 1 1 1 0 Pex19 protein family ATG_C PF09333.11 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.26 11.7 3.9 0.52 10.7 3.9 1.5 1 0 0 1 1 1 0 Autophagy-related protein C terminal domain CREPT PF16566.5 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 0.33 11.1 4.3 1.5 9.0 0.3 2.2 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour DUF1484 PF07363.11 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 2.8 9.0 8.8 12 7.0 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1484) Phage_holin_7_1 PF16081.5 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 5.3 7.2 11.7 50 4.1 0.8 2.0 1 1 1 2 2 2 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family DUF2203 PF09969.9 NODE_38825_length_542_cov_5.086785_g31470_i0reverse_frame_2 - 5.6 7.7 6.7 5.9 7.6 5.5 1.7 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Gly-zipper_YMGG PF13441.6 NODE_38823_length_542_cov_38.579882_g31468_i0reverse_frame_3 - 0.26 11.1 15.4 0.89 9.4 15.4 1.9 1 1 0 1 1 1 0 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 NODE_38823_length_542_cov_38.579882_g31468_i0reverse_frame_3 - 0.37 10.8 9.8 0.95 9.5 9.8 1.7 1 0 0 1 1 1 0 Glycine zipper Bacteriocin_IIc PF10439.9 NODE_38823_length_542_cov_38.579882_g31468_i0reverse_frame_3 - 0.43 10.7 4.9 0.86 9.8 4.9 1.6 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Gly-zipper_OmpA PF13436.6 NODE_38823_length_542_cov_38.579882_g31468_i0reverse_frame_3 - 1.9 8.3 14.3 8.1 6.3 14.3 2.1 1 1 0 1 1 1 0 Glycine-zipper domain Urb2 PF10441.9 NODE_38823_length_542_cov_38.579882_g31468_i0forward_frame_3 - 0.1 12.6 0.2 0.13 12.2 0.2 1.1 1 0 0 1 1 1 0 Urb2/Npa2 family AbfB PF05270.13 NODE_38820_length_542_cov_59.390533_g31465_i0forward_frame_3 - 0.15 12.0 0.8 1.1 9.2 0.1 2.1 2 0 0 2 2 2 0 Alpha-L-arabinofuranosidase B (ABFB) domain Inhibitor_Mig-6 PF11555.8 NODE_38811_length_542_cov_82.672584_g31456_i0reverse_frame_2 - 0.47 10.6 2.9 1.1 9.4 2.9 1.8 1 1 0 1 1 1 0 EGFR receptor inhibitor Mig-6 Pkinase PF00069.25 NODE_38811_length_542_cov_82.672584_g31456_i0forward_frame_3 - 1.6e-31 109.7 0.0 1.8e-31 109.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_38811_length_542_cov_82.672584_g31456_i0forward_frame_3 - 9.8e-10 38.1 0.0 1.3e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF5511 PF17630.2 NODE_38802_length_542_cov_120.668639_g31447_i0reverse_frame_3 - 0.18 12.0 1.9 0.34 11.1 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5511) Ras PF00071.22 NODE_38802_length_542_cov_120.668639_g31447_i0forward_frame_3 - 8.7e-07 28.7 0.9 1.2e-06 28.2 0.9 1.3 1 0 0 1 1 1 1 Ras family Cas_St_Csn2 PF16813.5 NODE_38802_length_542_cov_120.668639_g31447_i0forward_frame_3 - 0.022 13.9 7.3 0.012 14.8 5.0 1.5 1 1 1 2 2 2 0 CRISPR-associated protein Csn2 subfamily St MMR_HSR1_Xtn PF16897.5 NODE_38802_length_542_cov_120.668639_g31447_i0forward_frame_3 - 0.041 13.9 0.5 0.081 12.9 0.5 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain DUF3958 PF13125.6 NODE_38802_length_542_cov_120.668639_g31447_i0forward_frame_3 - 0.65 10.2 7.0 4.1 7.7 0.1 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3958) IMUP PF15761.5 NODE_38791_length_542_cov_428.828402_g31437_i0reverse_frame_3 - 1.3 9.7 11.9 0.38 11.5 9.3 1.5 2 0 0 2 2 2 0 Immortalisation up-regulated protein RR_TM4-6 PF06459.12 NODE_38791_length_542_cov_428.828402_g31437_i0reverse_frame_2 - 0.14 12.0 2.9 0.19 11.5 2.9 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 ANAPC2 PF08672.11 NODE_38782_length_542_cov_64769.015779_g31429_i0reverse_frame_2 - 0.089 13.3 0.4 0.15 12.6 0.4 1.4 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 Band_7_1 PF13421.6 NODE_38779_length_543_cov_2.051181_g31426_i0forward_frame_2 - 0.039 13.7 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 SPFH domain-Band 7 family LRR_6 PF13516.6 NODE_38779_length_543_cov_2.051181_g31426_i0forward_frame_2 - 0.08 13.0 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Leucine Rich repeat EF-hand_7 PF13499.6 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 6.4e-06 26.5 0.9 1.2e-05 25.6 0.9 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 2.8e-05 23.3 0.3 5.6e-05 22.4 0.3 1.5 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 0.00017 21.4 0.1 0.00031 20.5 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 0.005 16.7 0.4 0.014 15.3 0.4 1.8 1 0 0 1 1 1 1 EF-hand domain TMEM252 PF15664.5 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 0.022 14.5 0.1 0.03 14.0 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 252 family SpoU_methylase PF00588.19 NODE_38775_length_543_cov_3.486220_g31422_i0reverse_frame_2 - 1.9e-36 125.3 0.0 2.3e-36 125.1 0.0 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 NODE_38775_length_543_cov_3.486220_g31422_i0reverse_frame_2 - 1.8e-05 24.9 0.0 0.0002 21.6 0.0 2.1 2 0 0 2 2 2 1 RNA 2'-O ribose methyltransferase substrate binding Tat PF00539.18 NODE_38770_length_543_cov_3.781496_g31417_i0reverse_frame_3 - 0.01 16.0 1.0 0.017 15.3 1.0 1.4 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) Histone_H2A_C PF16211.5 NODE_38761_length_543_cov_80.013780_g31408_i0reverse_frame_3 - 0.2 11.4 4.2 0.4 10.5 4.2 1.5 1 0 0 1 1 1 0 C-terminus of histone H2A Not3 PF04065.15 NODE_38760_length_543_cov_95.663386_g31407_i0forward_frame_2 - 7.7e-34 117.1 1.7 1e-33 116.7 1.7 1.1 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component DUF5320 PF17253.2 NODE_38760_length_543_cov_95.663386_g31407_i0forward_frame_2 - 0.22 12.6 0.2 0.41 11.7 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5320) Snapin_Pallidin PF14712.6 NODE_38760_length_543_cov_95.663386_g31407_i0forward_frame_2 - 0.38 11.2 6.0 0.52 10.8 1.8 2.2 1 1 0 2 2 2 0 Snapin/Pallidin zf-RING_UBOX PF13445.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 1e-06 28.6 5.8 1.9e-06 27.8 5.8 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 1e-06 28.4 8.2 1.9e-06 27.6 8.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 1.8e-06 27.7 9.3 2.8e-06 27.1 9.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 3.4e-06 27.1 7.8 5.8e-06 26.4 7.8 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.00051 20.3 9.4 0.0008 19.7 9.4 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.00077 19.4 9.5 0.0012 18.8 9.5 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.015 15.2 6.0 0.026 14.4 6.0 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_6 PF14835.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.069 13.0 6.1 0.13 12.2 6.0 1.5 1 1 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_4 PF14570.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.15 11.9 5.3 0.32 10.8 5.3 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Cluap1 PF10234.9 ORF9997 - 8.6e-28 97.5 12.4 8.6e-28 97.5 12.4 1.8 1 1 1 2 2 2 1 Clusterin-associated protein-1 Lebercilin PF15619.6 ORF9997 - 0.0015 18.2 15.0 0.0023 17.6 15.0 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease HAUS4 PF14735.6 ORF9997 - 0.011 15.5 3.5 0.011 15.5 3.5 1.9 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 4 DUF3584 PF12128.8 ORF9997 - 0.033 11.7 9.9 0.035 11.7 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF932 PF06067.11 ORF9997 - 0.061 13.1 1.2 0.081 12.7 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF932) DUF745 PF05335.13 ORF9997 - 0.09 12.5 0.2 0.09 12.5 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Exonuc_VII_L PF02601.15 ORF9997 - 0.21 11.1 4.9 0.24 10.9 4.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3086 PF11285.8 ORF9997 - 0.6 9.2 7.0 0.72 8.9 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) TMF_TATA_bd PF12325.8 ORF9997 - 0.97 9.7 15.8 0.54 10.5 5.1 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Fzo_mitofusin PF04799.13 ORF9997 - 1.7 8.2 7.1 0.17 11.4 1.8 1.8 2 0 0 2 2 2 0 fzo-like conserved region RasGAP_C PF03836.15 ORF9997 - 2.2 8.4 13.8 4.5 7.4 13.6 1.7 1 1 0 1 1 1 0 RasGAP C-terminus DUF1664 PF07889.12 ORF9997 - 2.4 8.2 6.6 0.46 10.5 1.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF9997 - 8.5 6.7 23.0 3.4e+02 1.5 23.0 2.1 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) p450 PF00067.22 ORF99190 - 2.1e-32 112.5 0.0 2.3e-32 112.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Arf PF00025.21 ORF98547 - 9.1e-74 246.7 0.2 1.1e-73 246.4 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF98547 - 2.4e-15 56.4 0.0 2.9e-15 56.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF98547 - 6.3e-15 55.5 0.0 9e-15 55.0 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF98547 - 7.5e-14 51.6 0.0 8.6e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF98547 - 1.7e-11 43.9 1.5 1.2e-07 31.2 0.4 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF98547 - 2.4e-09 36.9 0.0 3.3e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF98547 - 9.4e-06 25.7 0.0 1.4e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF98547 - 0.079 12.3 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase RsgA_GTPase PF03193.16 ORF98547 - 0.14 12.0 0.0 0.93 9.4 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase DUF2043 PF09740.9 ORF98256 - 0.002 18.8 0.1 0.0033 18.1 0.1 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2043) Fer4 PF00037.27 ORF97448 - 2.1e-14 52.6 16.6 7e-09 35.1 0.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 ORF97448 - 8.6e-12 45.5 10.7 1.4e-11 44.8 10.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF97448 - 3.3e-10 39.9 8.4 5.4e-05 23.3 4.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF97448 - 4.7e-10 40.3 6.3 0.0001 23.2 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 ORF97448 - 1.1e-09 38.3 19.2 1.9e-06 27.9 12.2 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF97448 - 1.2e-08 35.3 1.7 0.0014 19.1 0.0 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF97448 - 9e-08 32.2 10.5 3.5e-07 30.3 11.0 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF97448 - 1.5e-06 28.6 5.2 0.0084 16.6 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF97448 - 4.2e-06 26.5 12.4 0.01 15.8 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 ORF97448 - 2.9e-05 23.9 16.9 0.0046 17.0 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 ORF97448 - 0.00083 19.7 13.0 0.059 13.9 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 ORF97448 - 0.0057 17.2 9.9 0.53 10.9 1.5 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 ORF97448 - 0.0087 16.9 3.6 0.0087 16.9 3.6 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain ETF_QO PF05187.13 ORF97448 - 0.13 12.4 5.6 0.31 11.2 2.6 2.1 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_18 PF13746.6 ORF97448 - 0.45 10.7 11.0 50 4.1 11.2 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF97448 - 0.57 11.1 14.1 2.4 9.1 2.1 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain LysR_substrate PF03466.20 ORF95587 - 3e-16 59.4 0.0 3.6e-16 59.2 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain Asp PF00026.23 ORF9493 - 6e-05 22.6 0.0 8.4e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Peptidase_M13 PF01431.21 ORF9493 - 0.014 15.0 0.3 0.023 14.3 0.0 1.5 2 0 0 2 2 2 0 Peptidase family M13 DUF2207 PF09972.9 ORF9493 - 0.064 12.0 0.0 0.071 11.9 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1336 PF07059.12 ORF94810 - 5.1e-27 95.4 0.0 5.9e-27 95.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1336) CTP_transf_like PF01467.26 ORF94584 - 0.0001 22.6 0.1 0.0003 21.0 0.1 1.7 2 0 0 2 2 2 1 Cytidylyltransferase-like FAD_syn PF06574.12 ORF94584 - 0.13 12.1 0.3 0.2 11.6 0.3 1.2 1 0 0 1 1 1 0 FAD synthetase SPC25 PF06703.11 ORF92012 - 0.00025 20.9 0.2 0.00043 20.1 0.1 1.4 2 0 0 2 2 2 1 Microsomal signal peptidase 25 kDa subunit (SPC25) GWT1 PF06423.12 ORF92012 - 0.1 12.7 0.2 0.14 12.3 0.2 1.2 1 0 0 1 1 1 0 GWT1 CIA30 PF08547.12 ORF91611 - 8.1e-10 38.9 0.0 9.8e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) MgtC PF02308.16 ORF9135 - 2.8e-30 105.1 8.5 3.6e-30 104.8 8.5 1.1 1 0 0 1 1 1 1 MgtC family YrhK PF14145.6 ORF9135 - 0.0078 16.1 2.7 0.027 14.3 2.7 2.0 1 1 0 1 1 1 1 YrhK-like protein SNARE PF05739.19 ORF89203 - 2.7e-10 40.1 0.2 7.1e-10 38.7 0.2 1.7 1 0 0 1 1 1 1 SNARE domain Syntaxin PF00804.25 ORF89203 - 0.0042 16.8 8.2 0.0075 16.0 8.2 1.5 1 1 0 1 1 1 1 Syntaxin Peptidase_M10_C PF08548.11 ORF89203 - 0.37 10.7 2.9 0.41 10.5 1.8 1.6 1 1 1 2 2 2 0 Peptidase M10 serralysin C terminal PIN_8 PF18476.1 ORF89203 - 0.39 10.5 7.4 0.51 10.2 7.4 1.3 1 0 0 1 1 1 0 PIN like domain Arf PF00025.21 ORF88327 - 9.1e-74 246.7 0.2 1.1e-73 246.4 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF88327 - 2.4e-15 56.4 0.0 2.9e-15 56.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF88327 - 6.3e-15 55.5 0.0 9e-15 55.0 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF88327 - 7.5e-14 51.6 0.0 8.6e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF88327 - 1.7e-11 43.9 1.5 1.2e-07 31.2 0.4 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF88327 - 2.4e-09 36.9 0.0 3.3e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF88327 - 9.4e-06 25.7 0.0 1.4e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF88327 - 0.079 12.3 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase RsgA_GTPase PF03193.16 ORF88327 - 0.14 12.0 0.0 0.93 9.4 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase NuA4 PF09340.10 ORF88146 - 0.032 14.1 0.1 0.43 10.5 0.0 2.2 2 0 0 2 2 2 0 Histone acetyltransferase subunit NuA4 MIS13 PF08202.11 ORF88146 - 0.12 11.7 1.4 0.27 10.5 0.1 1.8 2 0 0 2 2 2 0 Mis12-Mtw1 protein family DSPc PF00782.20 ORF8605 - 6.2e-20 71.4 0.0 7.8e-20 71.0 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Init_tRNA_PT PF04179.12 ORF8605 - 0.00044 20.5 0.1 0.00082 19.7 0.1 1.4 1 0 0 1 1 1 1 Rit1 DUSP-like domain Y_phosphatase PF00102.27 ORF8605 - 0.0054 16.3 0.0 0.0068 16.0 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF8605 - 0.052 13.7 0.0 0.067 13.3 0.0 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate Peptidase_C14 PF00656.22 ORF85023 - 8.4e-08 32.5 0.0 1.4e-07 31.8 0.0 1.3 1 1 0 1 1 1 1 Caspase domain PP-binding PF00550.25 ORF84896 - 0.025 14.9 0.0 0.2 12.1 0.0 2.1 2 0 0 2 2 2 0 Phosphopantetheine attachment site Ribosomal_L50 PF10501.9 ORF84896 - 0.055 13.6 0.3 0.13 12.4 0.2 1.8 1 1 1 2 2 2 0 Ribosomal subunit 39S Arf PF00025.21 ORF8433 - 9.1e-74 246.7 0.2 1.1e-73 246.4 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF8433 - 2.4e-15 56.4 0.0 2.9e-15 56.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF8433 - 6.3e-15 55.5 0.0 9e-15 55.0 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF8433 - 7.5e-14 51.6 0.0 8.6e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF8433 - 1.7e-11 43.9 1.5 1.2e-07 31.2 0.4 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF8433 - 2.4e-09 36.9 0.0 3.3e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF8433 - 9.4e-06 25.7 0.0 1.4e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF8433 - 0.079 12.3 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase RsgA_GTPase PF03193.16 ORF8433 - 0.14 12.0 0.0 0.93 9.4 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase DAO PF01266.24 ORF84124 - 3.6e-08 33.4 0.0 5.1e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase SBP_bac_5 PF00496.22 ORF84124 - 0.016 14.2 0.0 0.023 13.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle GIDA PF01134.22 ORF84124 - 0.19 10.8 0.0 0.27 10.3 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A Endonuclease_7 PF02945.15 ORF84068 - 0.065 13.2 0.2 0.065 13.2 0.2 1.7 2 0 0 2 2 2 0 Recombination endonuclease VII H_PPase PF03030.16 ORF83009 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF83009 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF83009 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF83009 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 ALMT PF11744.8 ORF81805 - 9 5.0 9.9 10 4.8 9.9 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Peptidase_M20 PF01546.28 ORF81152 - 1.1e-16 61.2 0.0 1.2e-16 61.0 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M42 PF05343.14 ORF81152 - 4.3e-05 22.7 0.0 5.5e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase M20_dimer PF07687.14 ORF81152 - 0.013 15.4 0.1 0.035 14.0 0.0 1.7 1 1 0 1 1 1 0 Peptidase dimerisation domain DUF4220 PF13968.6 ORF79707 - 0.003 17.0 0.0 0.0039 16.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4220) ELO PF01151.18 ORF79707 - 0.0069 15.9 1.1 0.0069 15.9 1.1 1.6 1 1 1 2 2 2 2 GNS1/SUR4 family 2TM PF13239.6 ORF79707 - 3.5 8.0 7.9 2.1 8.7 5.6 1.8 1 1 0 1 1 1 0 2TM domain H_PPase PF03030.16 ORF79545 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF79545 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF79545 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF79545 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 zinc_ribbon_12 PF11331.8 ORF79272 - 0.077 12.8 0.5 0.21 11.5 0.5 1.7 1 0 0 1 1 1 0 Probable zinc-ribbon domain Ctr PF04145.15 ORF78686 - 1.3e-19 71.3 4.7 1.6e-19 71.0 4.7 1.1 1 0 0 1 1 1 1 Ctr copper transporter family LapA_dom PF06305.11 ORF78686 - 0.072 12.9 0.1 0.072 12.9 0.1 2.8 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain RseC_MucC PF04246.12 ORF78686 - 7.1 6.6 6.3 1.4 8.9 1.4 2.2 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC CIA30 PF08547.12 ORF77969 - 8.1e-10 38.9 0.0 9.8e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) H_PPase PF03030.16 ORF77788 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF77788 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF77788 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF77788 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 Endonuclease_5 PF04493.14 ORF76875 - 2.3e-24 86.2 0.0 3.4e-24 85.6 0.0 1.2 1 0 0 1 1 1 1 Endonuclease V EI24 PF07264.11 ORF76124 - 1.1e-13 51.8 2.2 1.4e-13 51.5 2.2 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) DUF4834 PF16118.5 ORF76114 - 0.07 14.1 0.3 0.07 14.1 0.3 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) Comm PF15957.5 ORF76114 - 0.14 12.5 0.0 0.14 12.5 0.0 2.2 2 1 0 2 2 2 0 Commissureless TRP PF06011.12 ORF76114 - 0.23 10.1 11.9 0.28 9.8 11.9 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Herpes_LMP1 PF05297.11 ORF76114 - 0.24 10.6 5.9 0.24 10.5 5.9 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) COPI_assoc PF08507.10 ORF76114 - 0.73 9.9 14.5 0.62 10.1 3.8 2.7 1 1 1 2 2 2 0 COPI associated protein Shisa PF13908.6 ORF76114 - 0.76 10.0 3.0 0.4 10.9 0.8 1.7 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator S_4TM PF18159.1 ORF76114 - 1.6 8.0 9.8 0.13 11.6 0.5 2.2 1 1 0 2 2 2 0 SMODS-associating 4TM effector domain Spo7 PF03907.13 ORF76114 - 2.6 7.4 6.2 5 6.5 4.8 1.9 2 0 0 2 2 2 0 Spo7-like protein DUF3522 PF12036.8 ORF74606 - 2.9e-22 79.9 1.1 3.6e-22 79.6 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3522) Glyco_hydro_72 PF03198.14 ORF74606 - 0.24 10.6 0.0 0.34 10.1 0.0 1.1 1 0 0 1 1 1 0 Glucanosyltransferase ZnuA PF01297.17 ORF73189 - 0.021 14.2 0.3 0.025 14.0 0.3 1.3 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Med9 PF07544.13 ORF73189 - 0.61 10.2 7.7 4.1 7.6 2.9 2.9 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 H_PPase PF03030.16 ORF72673 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF72673 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF72673 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF72673 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 RNase_HII PF01351.18 ORF70606 - 2e-13 50.6 0.0 4.8e-12 46.1 0.0 2.2 1 1 0 1 1 1 1 Ribonuclease HII 2OG-FeII_Oxy_3 PF13640.6 ORF70165 - 7.4e-18 65.2 0.0 1e-17 64.8 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF70165 - 5.3e-11 43.0 0.0 8.1e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Aminotran_5 PF00266.19 ORF70104 - 6.7e-21 74.6 0.0 7.4e-21 74.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V PTRF_SDPR PF15237.6 ORF70104 - 0.078 12.6 0.0 0.095 12.3 0.0 1.1 1 0 0 1 1 1 0 PTRF/SDPR family CEP19 PF14933.6 ORF6847 - 5.4e-14 52.8 0.0 1.2e-13 51.7 0.0 1.7 2 0 0 2 2 2 1 CEP19-like protein ABA_GPCR PF12430.8 ORF65279 - 9.7e-25 87.4 11.3 1.1e-24 87.2 11.3 1.0 1 0 0 1 1 1 1 Abscisic acid G-protein coupled receptor MAPEG PF01124.18 ORF64540 - 1.1e-08 35.0 0.0 1.7e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 MAPEG family MAPEG PF01124.18 ORF64060 - 1.1e-08 35.0 0.0 1.7e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 MAPEG family PQ-loop PF04193.14 ORF62262 - 3.7e-27 93.9 15.7 1.4e-16 60.0 5.5 2.9 3 0 0 3 3 3 2 PQ loop repeat Jnk-SapK_ap_N PF09744.9 ORF59359 - 0.49 10.6 10.3 0.89 9.8 10.2 1.4 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Ax_dynein_light PF10211.9 ORF5861 - 0.3 11.0 7.0 2.5 8.0 0.5 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain CENP-H PF05837.12 ORF5861 - 1.9 8.9 6.7 6.8 7.1 0.9 2.2 2 0 0 2 2 2 0 Centromere protein H (CENP-H) LMBR1 PF04791.16 ORF5751 - 8.6e-11 41.4 0.1 9.6e-11 41.3 0.1 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein Syntaxin-6_N PF09177.11 ORF5751 - 0.037 14.6 0.5 0.11 13.1 0.2 1.8 1 1 0 1 1 1 0 Syntaxin 6, N-terminal H_PPase PF03030.16 ORF54158 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF54158 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF54158 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF54158 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 Ank_2 PF12796.7 ORF535 - 1.7e-36 124.6 0.2 1.2e-15 57.8 0.0 2.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF535 - 2.3e-20 70.5 0.0 0.00041 20.6 0.0 4.3 4 0 0 4 4 4 4 Ankyrin repeat Ank_5 PF13857.6 ORF535 - 1.7e-17 63.2 0.5 5e-07 29.9 0.0 3.9 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF535 - 2.4e-16 59.3 0.0 0.027 14.9 0.0 4.4 4 0 0 4 4 4 4 Ankyrin repeat Ank_4 PF13637.6 ORF535 - 7.5e-11 42.3 0.0 0.0017 18.9 0.0 3.1 2 1 1 3 3 3 3 Ankyrin repeats (many copies) FlgD_ig PF13860.6 ORF53140 - 4.1e-24 84.2 3.0 4.1e-24 84.2 3.0 2.1 2 0 0 2 2 2 1 FlgD Ig-like domain FLgD_tudor PF13861.6 ORF53140 - 2.1e-15 56.7 3.3 2.1e-15 56.7 3.3 1.7 2 0 0 2 2 2 1 FlgD Tudor-like domain FlgD PF03963.14 ORF53140 - 2.7e-08 34.0 0.8 6.8e-07 29.5 0.3 2.4 2 0 0 2 2 2 1 Flagellar hook capping protein - N-terminal region MG2 PF01835.19 ORF53140 - 0.015 15.8 0.1 0.028 14.9 0.1 1.5 1 0 0 1 1 1 0 MG2 domain DUF2271 PF10029.9 ORF53140 - 0.1 12.2 0.0 0.47 10.1 0.0 1.9 1 1 1 2 2 2 0 Predicted periplasmic protein (DUF2271) H_PPase PF03030.16 ORF52919 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF52919 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF52919 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF52919 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 DUF547 PF04784.14 ORF51851 - 1.1e-07 31.9 0.0 1.5e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF547 Pro_isomerase PF00160.21 ORF5178 - 3.9e-42 144.2 0.0 4.4e-42 144.0 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATP1G1_PLM_MAT8 PF02038.16 ORF5063 - 0.032 13.7 0.0 0.032 13.7 0.0 2.6 3 0 0 3 3 3 0 ATP1G1/PLM/MAT8 family Sensor PF13796.6 ORF5063 - 0.033 14.2 0.3 0.033 14.2 0.3 1.7 2 0 0 2 2 2 0 Putative sensor Tmemb_9 PF05434.11 ORF5063 - 0.14 12.0 1.8 0.18 11.7 1.8 1.2 1 0 0 1 1 1 0 TMEM9 DUF2206 PF09971.9 ORF5063 - 0.15 10.8 0.2 0.21 10.3 0.2 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) NQR2_RnfD_RnfE PF03116.15 ORF50347 - 6e-54 183.4 3.6 6.5e-54 183.3 3.6 1.0 1 0 0 1 1 1 1 NQR2, RnfD, RnfE family DUF3792 PF12670.7 ORF50347 - 0.017 15.2 2.6 0.029 14.5 2.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) Phosphorylase PF00343.20 ORF4912 - 8.3e-57 193.0 1.1 9.3e-57 192.8 1.1 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase Asp PF00026.23 ORF48429 - 5.9e-05 22.6 0.0 8.4e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Peptidase_M13 PF01431.21 ORF48429 - 0.014 15.0 0.3 0.023 14.3 0.0 1.5 2 0 0 2 2 2 0 Peptidase family M13 DUF2207 PF09972.9 ORF48429 - 0.14 10.9 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) UPF0242 PF06785.11 ORF47346 - 5.9e-05 23.3 5.3 6.2e-05 23.2 5.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus WXG100 PF06013.12 ORF47346 - 0.023 14.9 0.6 0.24 11.7 0.1 2.1 1 1 1 2 2 2 0 Proteins of 100 residues with WXG DUF1664 PF07889.12 ORF47346 - 0.11 12.5 4.7 0.23 11.5 4.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) YlqD PF11068.8 ORF47346 - 0.13 12.7 13.2 0.4 11.0 6.5 2.3 1 1 1 2 2 2 0 YlqD protein KIP1 PF07765.12 ORF47346 - 0.14 12.3 8.1 0.19 11.9 6.5 2.1 1 1 0 1 1 1 0 KIP1-like protein Fzo_mitofusin PF04799.13 ORF47346 - 0.15 11.6 3.7 1.5 8.3 4.9 2.0 2 0 0 2 2 2 0 fzo-like conserved region Atg14 PF10186.9 ORF47346 - 0.45 9.5 10.8 0.72 8.9 10.8 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF883 PF05957.13 ORF47346 - 0.52 11.0 3.6 0.8 10.3 3.1 1.5 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Fib_alpha PF08702.10 ORF47346 - 1.5 9.0 10.7 2.4 8.3 10.7 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4407 PF14362.6 ORF47346 - 3.1 7.1 7.0 4.3 6.6 7.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF2203 PF09969.9 ORF47346 - 4.7 7.9 7.7 3.2 8.5 5.1 2.0 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) TMPIT PF07851.13 ORF47346 - 4.9 6.3 9.4 6.6 5.9 9.4 1.1 1 0 0 1 1 1 0 TMPIT-like protein Arf PF00025.21 ORF45546 - 5.4e-74 247.4 0.1 6.5e-74 247.1 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 ORF45546 - 1.4e-14 54.0 0.0 1.7e-14 53.7 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF45546 - 2e-14 53.9 0.0 2.8e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF45546 - 7.6e-14 51.5 0.0 9.2e-14 51.3 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF45546 - 2.8e-12 46.5 0.3 3.9e-08 32.9 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF45546 - 2.1e-09 37.1 0.0 2.7e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF45546 - 3.1e-06 27.2 0.0 4.4e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase MeaB PF03308.16 ORF45546 - 0.0023 17.0 0.1 0.0068 15.4 0.0 1.8 1 1 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 ORF45546 - 0.01 15.4 0.3 0.047 13.3 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain 6PF2K PF01591.18 ORF45546 - 0.092 12.0 0.1 0.13 11.5 0.1 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase DUF2754 PF10953.8 ORF45546 - 0.1 12.8 0.0 0.26 11.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) Aldo_ket_red PF00248.21 ORF44949 - 5.5e-16 58.6 0.0 6.2e-16 58.4 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Fib_alpha PF08702.10 ORF44924 - 0.18 12.0 0.7 0.53 10.5 0.1 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Ank_2 PF12796.7 ORF44772 - 5.3e-21 75.0 0.1 1.3e-08 35.3 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF44772 - 5.3e-19 66.3 0.0 0.0039 17.6 0.0 5.4 6 0 0 6 6 6 4 Ankyrin repeat Ank_4 PF13637.6 ORF44772 - 6e-19 68.2 0.0 1.3e-05 25.7 0.0 3.7 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF44772 - 5.6e-12 45.5 0.1 0.084 13.4 0.0 5.3 5 1 1 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 ORF44772 - 1e-05 25.7 0.1 1 9.7 0.0 4.4 3 2 2 5 5 5 2 Ankyrin repeats (many copies) adh_short PF00106.25 ORF44719 - 7.9e-15 54.8 0.0 9.8e-15 54.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF44719 - 5.9e-09 35.8 0.0 7.2e-09 35.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase PSI_integrin PF17205.3 ORF44550 - 0.0084 15.8 0.5 0.014 15.1 0.5 1.3 1 0 0 1 1 1 1 Integrin plexin domain TTL PF03133.15 ORF44516 - 1.1e-21 77.2 0.0 1.5e-21 76.8 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family H_PPase PF03030.16 ORF44447 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF44447 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF44447 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF44447 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 H_PPase PF03030.16 ORF43802 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF43802 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF43802 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF43802 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 CIA30 PF08547.12 ORF41722 - 8.1e-10 38.9 0.0 9.8e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) DUF373 PF04123.13 ORF40069 - 0.059 12.8 7.5 0.075 12.5 7.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF1218 PF06749.12 ORF40069 - 1.9 9.1 11.2 3.8 8.1 0.5 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1218) Cluap1 PF10234.9 ORF40000 - 8.6e-28 97.5 12.4 8.6e-28 97.5 12.4 1.8 1 1 1 2 2 2 1 Clusterin-associated protein-1 Lebercilin PF15619.6 ORF40000 - 0.0015 18.2 15.0 0.0023 17.6 15.0 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease HAUS4 PF14735.6 ORF40000 - 0.011 15.5 3.5 0.011 15.5 3.5 1.9 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 4 DUF3584 PF12128.8 ORF40000 - 0.033 11.7 9.9 0.035 11.7 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF932 PF06067.11 ORF40000 - 0.061 13.1 1.2 0.081 12.7 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF932) DUF745 PF05335.13 ORF40000 - 0.09 12.5 0.2 0.09 12.5 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Exonuc_VII_L PF02601.15 ORF40000 - 0.21 11.1 4.9 0.24 10.9 4.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3086 PF11285.8 ORF40000 - 0.6 9.2 7.0 0.72 8.9 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) TMF_TATA_bd PF12325.8 ORF40000 - 0.97 9.7 15.8 0.54 10.5 5.1 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Fzo_mitofusin PF04799.13 ORF40000 - 1.7 8.2 7.1 0.17 11.4 1.8 1.8 2 0 0 2 2 2 0 fzo-like conserved region RasGAP_C PF03836.15 ORF40000 - 2.2 8.4 13.8 4.5 7.4 13.6 1.7 1 1 0 1 1 1 0 RasGAP C-terminus DUF1664 PF07889.12 ORF40000 - 2.4 8.2 6.6 0.46 10.5 1.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF40000 - 8.5 6.7 23.0 3.4e+02 1.5 23.0 2.1 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks116.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks116.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks116.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks116.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ank_5 PF13857.6 ORF39956 - 1e-06 28.9 0.0 2.4e-06 27.7 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF39956 - 5.3e-06 26.9 0.0 7.5e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF39956 - 5.8e-05 23.6 0.0 0.00024 21.6 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF39956 - 0.0019 18.6 0.0 0.0042 17.5 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeat Ank_3 PF13606.6 ORF39956 - 0.03 14.8 0.0 0.12 13.1 0.0 2.0 2 0 0 2 2 2 0 Ankyrin repeat Astro_capsid_p PF12226.8 ORF39956 - 0.087 12.0 0.5 0.094 11.9 0.5 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein zf-RING_5 PF14634.6 ORF39585 - 0.0037 17.2 0.2 0.0096 15.9 0.2 1.8 1 0 0 1 1 1 1 zinc-RING finger domain Endonuclease_7 PF02945.15 ORF38408 - 0.065 13.2 0.2 0.065 13.2 0.2 1.7 2 0 0 2 2 2 0 Recombination endonuclease VII CHD5 PF04420.14 ORF37833 - 0.43 10.4 3.3 0.65 9.8 3.3 1.2 1 0 0 1 1 1 0 CHD5-like protein Humanin PF15040.6 ORF37458 - 2.2 7.8 4.8 0.41 10.1 0.3 2.2 2 0 0 2 2 2 0 Humanin family Fer4_16 PF13484.6 ORF3731 - 1.4e-15 58.0 0.1 2.4e-15 57.2 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 ORF3731 - 0.035 14.7 0.5 0.15 12.7 0.5 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF3731 - 0.17 12.9 0.8 8.9 7.5 0.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 ORF3731 - 0.18 11.7 5.3 5 7.1 0.1 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_6 PF12837.7 ORF3731 - 0.25 11.5 8.8 1.6 9.0 2.2 3.0 3 1 0 3 3 3 0 4Fe-4S binding domain Endonuclease_7 PF02945.15 ORF36653 - 0.065 13.2 0.2 0.065 13.2 0.2 1.7 2 0 0 2 2 2 0 Recombination endonuclease VII Pkinase PF00069.25 ORF35599 - 4.6e-53 180.3 1.0 5.2e-53 180.1 1.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF35599 - 3e-35 121.7 0.3 3.7e-35 121.5 0.3 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF35599 - 1.4e-06 27.5 0.4 1.7e-06 27.3 0.4 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF35599 - 1.6e-05 24.6 0.5 2.2e-05 24.2 0.5 1.2 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 ORF35599 - 1.9e-05 24.1 0.1 3.4e-05 23.3 0.1 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF35599 - 2.5e-05 23.7 0.2 4.7e-05 22.8 0.2 1.6 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF35599 - 0.00025 21.1 0.3 0.00064 19.7 0.3 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family FTA2 PF13095.6 ORF35599 - 0.0022 17.7 0.1 0.0099 15.5 0.0 1.8 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Seadorna_VP7 PF07387.11 ORF35599 - 0.026 13.6 0.8 0.035 13.2 0.6 1.3 1 1 0 1 1 1 0 Seadornavirus VP7 Choline_kinase PF01633.20 ORF35599 - 0.035 13.7 1.3 0.062 12.9 1.2 1.5 1 1 0 1 1 1 0 Choline/ethanolamine kinase Pkinase_fungal PF17667.1 ORF35599 - 0.049 12.4 0.1 0.082 11.7 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase H_PPase PF03030.16 ORF34192 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF34192 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF34192 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF34192 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 Herpes_UL92 PF03048.14 ORF34014 - 0.0054 16.5 0.3 0.0083 15.9 0.3 1.3 1 0 0 1 1 1 1 UL92 family COMMD1_N PF17221.3 ORF34014 - 0.014 15.7 0.1 0.026 14.8 0.1 1.5 1 0 0 1 1 1 0 COMMD1 N-terminal domain Syntaxin_2 PF14523.6 ORF34014 - 0.025 14.9 0.7 0.025 14.9 0.7 2.0 2 1 0 2 2 2 0 Syntaxin-like protein Fer4 PF00037.27 ORF32490 - 5.1e-14 51.4 11.8 1.1e-08 34.5 1.7 3.0 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 ORF32490 - 6.4e-13 49.1 9.1 6.4e-13 49.1 9.1 2.5 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF32490 - 1.1e-11 44.6 21.7 5.1e-09 36.2 11.0 3.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF32490 - 2.2e-09 37.3 10.9 2.2e-09 37.3 10.9 2.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF32490 - 1.5e-08 34.4 13.2 2.6e-05 24.1 3.7 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 ORF32490 - 2.9e-07 31.3 22.3 0.0011 19.9 1.7 3.4 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 ORF32490 - 4.1e-07 30.0 21.2 4.1e-06 26.8 10.0 2.6 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF32490 - 7e-06 25.8 11.7 0.00017 21.5 3.7 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.6 ORF32490 - 9.2e-05 22.8 11.7 9.2e-05 22.8 11.7 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF32490 - 0.00027 21.7 19.4 0.0045 17.8 7.3 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 ORF32490 - 0.00036 20.8 11.5 0.0014 19.0 2.7 3.9 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 ORF32490 - 0.0007 20.1 23.9 0.0032 18.0 11.6 3.5 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF32490 - 0.009 16.8 15.9 0.094 13.6 0.2 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 ORF32490 - 0.035 14.7 20.8 0.077 13.5 4.5 3.3 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 ORF32490 - 0.11 12.7 16.4 0.21 11.8 0.4 3.0 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 ORF32490 - 0.18 12.6 0.6 0.18 12.6 0.6 3.2 2 1 0 2 2 2 0 4Fe-4S single cluster domain HECT PF00632.25 ORF32481 - 8.7e-43 147.0 4.3 9.5e-43 146.8 4.3 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Aa_trans PF01490.18 ORF32023 - 3.3e-16 59.0 6.7 4.7e-16 58.5 6.7 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein AA_permease_2 PF13520.6 ORF32023 - 0.023 13.5 10.2 0.069 12.0 1.9 2.0 2 0 0 2 2 2 0 Amino acid permease Acetyltransf_1 PF00583.25 ORF31826 - 3.2e-06 27.4 0.0 4.1e-06 27.0 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF31826 - 3.2e-06 27.5 0.0 4.8e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF31826 - 4e-05 23.6 0.0 5.8e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain H_PPase PF03030.16 ORF31539 - 4.2e-22 78.6 3.6 4.5e-22 78.5 2.5 1.6 1 1 1 2 2 2 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF31539 - 0.019 15.4 1.2 0.019 15.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) SLATT_fungal PF18142.1 ORF31539 - 0.15 12.1 0.4 0.15 12.1 0.4 1.8 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain EMP70 PF02990.16 ORF31539 - 0.95 8.0 6.4 0.11 11.1 2.4 1.3 2 0 0 2 2 2 0 Endomembrane protein 70 Fzo_mitofusin PF04799.13 ORF31431 - 0.076 12.6 2.0 0.16 11.5 0.6 2.1 2 0 0 2 2 2 0 fzo-like conserved region DUF3573 PF12097.8 ORF31431 - 0.077 11.8 0.7 0.14 11.0 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3573) DUF5315 PF17242.2 ORF31431 - 0.18 11.7 3.6 0.11 12.3 1.2 2.0 2 0 0 2 2 2 0 Disordered region of unknown function (DUF5315) PSP1 PF04468.12 ORF31431 - 5 7.5 7.8 0.4 11.0 1.9 2.2 2 1 0 2 2 2 0 PSP1 C-terminal conserved region TBD PF12845.7 ORF23227 - 0.14 12.1 3.7 0.096 12.6 1.4 1.9 2 0 0 2 2 2 0 TBD domain TetR_C_4 PF08359.11 ORF22346 - 0.087 13.0 4.9 0.13 12.5 4.9 1.3 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region DUF349 PF03993.12 ORF22346 - 4.7 7.6 10.2 8.7 6.7 8.9 2.1 1 1 0 1 1 1 0 Domain of Unknown Function (DUF349) Arf PF00025.21 ORF19759 - 9.1e-74 246.7 0.2 1.1e-73 246.4 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF19759 - 2.4e-15 56.4 0.0 2.9e-15 56.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF19759 - 6.3e-15 55.5 0.0 9e-15 55.0 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF19759 - 7.5e-14 51.6 0.0 8.6e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF19759 - 1.7e-11 43.9 1.5 1.2e-07 31.2 0.4 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF19759 - 2.4e-09 36.9 0.0 3.3e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF19759 - 9.4e-06 25.7 0.0 1.4e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF19759 - 0.079 12.3 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase RsgA_GTPase PF03193.16 ORF19759 - 0.14 12.0 0.0 0.93 9.4 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase Arf PF00025.21 ORF19681 - 5.7e-56 188.7 0.5 6.9e-56 188.4 0.5 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 ORF19681 - 4.2e-18 65.5 0.0 4.9e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF19681 - 1.3e-12 48.0 0.1 1.8e-12 47.5 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF19681 - 9.3e-12 44.7 0.1 1.1e-11 44.6 0.1 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF19681 - 1.1e-09 38.0 1.3 6e-07 28.9 0.1 2.6 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 ORF19681 - 1.7e-07 31.3 0.1 2.7e-07 30.7 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF19681 - 9.7e-06 25.1 0.1 1.3e-05 24.7 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Scytalone_dh PF02982.14 ORF19681 - 0.0045 16.8 0.0 0.0075 16.1 0.0 1.4 1 0 0 1 1 1 1 Scytalone dehydratase PduV-EutP PF10662.9 ORF19681 - 0.01 15.6 0.6 0.069 12.9 0.0 2.3 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 ORF19681 - 0.04 13.4 1.1 1.4 8.4 1.1 2.2 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_18 PF13238.6 ORF19681 - 0.051 14.1 0.0 0.068 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain Endonuclease_7 PF02945.15 ORF18703 - 0.065 13.2 0.2 0.065 13.2 0.2 1.7 2 0 0 2 2 2 0 Recombination endonuclease VII CRAL_TRIO PF00650.20 ORF17290 - 2.6e-13 50.0 1.3 2.7e-13 49.9 0.3 1.5 2 0 0 2 2 2 1 CRAL/TRIO domain Tnp_DNA_bind PF14706.6 ORF15752 - 0.035 14.0 0.0 0.073 12.9 0.0 1.5 1 0 0 1 1 1 0 Transposase DNA-binding PP-binding PF00550.25 ORF15050 - 6.5e-15 55.2 0.0 9.6e-13 48.3 0.0 2.2 2 0 0 2 2 2 2 Phosphopantetheine attachment site TPR_12 PF13424.6 ORF15050 - 0.046 14.0 0.1 0.1 12.9 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat SNARE PF05739.19 ORF11752 - 2.7e-10 40.1 0.2 7.1e-10 38.7 0.2 1.7 1 0 0 1 1 1 1 SNARE domain Syntaxin PF00804.25 ORF11752 - 0.0042 16.8 8.2 0.0075 16.0 8.2 1.5 1 1 0 1 1 1 1 Syntaxin Peptidase_M10_C PF08548.11 ORF11752 - 0.37 10.7 2.9 0.41 10.5 1.8 1.6 1 1 1 2 2 2 0 Peptidase M10 serralysin C terminal PIN_8 PF18476.1 ORF11752 - 0.39 10.5 7.4 0.51 10.2 7.4 1.3 1 0 0 1 1 1 0 PIN like domain TCR PF03638.15 ORF111052 - 0.041 14.2 1.4 0.041 14.2 1.4 1.8 2 0 0 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain HNH_2 PF13391.6 ORF110838 - 0.023 14.8 0.0 0.043 13.9 0.0 1.5 1 0 0 1 1 1 0 HNH endonuclease NPR3 PF03666.13 ORF110167 - 0.069 11.9 0.0 0.082 11.7 0.0 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DAO PF01266.24 ORF109903 - 3.6e-08 33.4 0.0 5.1e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase SBP_bac_5 PF00496.22 ORF109903 - 0.016 14.2 0.0 0.023 13.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle GIDA PF01134.22 ORF109903 - 0.19 10.8 0.0 0.27 10.3 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A DUF373 PF04123.13 ORF109578 - 0.039 13.4 7.1 0.049 13.1 7.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF1218 PF06749.12 ORF109578 - 1.4 9.4 10.9 9 6.9 1.0 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1218) ZapB PF06005.12 ORF109322 - 0.048 14.1 0.8 0.048 14.1 0.8 2.8 2 2 0 2 2 2 0 Cell division protein ZapB Med30 PF11315.8 ORF109322 - 0.6 10.3 5.8 3.7 7.7 0.8 2.4 1 1 1 2 2 2 0 Mediator complex subunit 30 F-box PF00646.33 ORF104398 - 1.6e-06 27.8 0.1 1.9e-05 24.4 0.0 2.4 2 0 0 2 2 2 1 F-box domain TssC PF17541.2 ORF104398 - 0.005 15.7 1.3 0.0065 15.3 1.3 1.1 1 0 0 1 1 1 1 Type VI secretion system, TssC, VipB MT PF12777.7 ORF104398 - 0.023 13.7 0.1 0.027 13.5 0.1 1.1 1 0 0 1 1 1 0 Microtubule-binding stalk of dynein motor TauE PF01925.19 ORF104115 - 2.9e-14 53.3 17.1 3.6e-14 53.0 17.1 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Folate_rec PF03024.14 ORF103949 - 0.006 16.5 1.0 0.0074 16.2 1.0 1.1 1 0 0 1 1 1 1 Folate receptor family DNase-RNase PF02577.14 ORF102197 - 0.064 12.9 0.0 0.75 9.4 0.0 2.0 1 1 1 2 2 2 0 Bifunctional nuclease Form_Nir_trans PF01226.17 ORF102171 - 1.9e-55 187.8 16.0 2.2e-55 187.6 16.0 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter Ank_2 PF12796.7 ORF101925 - 1.6e-26 92.7 0.6 1.5e-15 57.5 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF101925 - 3.2e-22 78.3 4.2 4.4e-09 36.4 0.2 3.9 2 1 3 5 5 5 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF101925 - 5.7e-22 77.8 9.9 1.1e-09 38.7 0.1 4.1 1 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF101925 - 1.8e-20 72.4 5.0 1.1e-06 28.8 0.2 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF101925 - 3.6e-19 66.8 2.0 6.9e-05 22.9 0.1 4.6 5 0 0 5 5 5 3 Ankyrin repeat Methyltransf_16 PF10294.9 ORF100477 - 4.1e-22 78.7 0.0 5.3e-22 78.4 0.0 1.0 1 0 0 1 1 1 1 Lysine methyltransferase zf-RING_11 PF17123.5 ORF100306 - 1.6e-10 40.5 4.3 1.6e-10 40.5 4.3 1.9 2 0 0 2 2 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF100306 - 1.7e-10 41.0 9.0 2.9e-10 40.3 9.0 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF100306 - 7.2e-09 35.3 10.0 1.5e-08 34.3 10.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF100306 - 3.4e-07 30.2 3.7 7.4e-07 29.1 3.7 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF100306 - 5.3e-06 26.6 9.6 3.2e-05 24.1 9.6 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF100306 - 5.8e-06 26.1 14.0 1.2e-05 25.0 14.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF100306 - 0.00052 19.9 12.8 0.00091 19.1 12.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Lipase_GDSL PF00657.22 ORF100306 - 0.0053 16.7 0.3 0.0058 16.6 0.3 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase zf-HC5HC2H PF13771.6 ORF100306 - 0.023 14.9 0.5 0.023 14.9 0.5 2.8 3 1 1 4 4 4 0 PHD-like zinc-binding domain zf-C3HC4_3 PF13920.6 ORF100306 - 0.04 13.8 10.8 0.061 13.2 10.8 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) BppU_IgG PF18667.1 ORF100306 - 0.11 12.7 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Baseplate upper protein immunoglobulin like domain zf-C3HC4_4 PF15227.6 ORF100306 - 0.26 11.5 9.9 0.83 9.9 9.9 1.9 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Presenilin PF01080.17 ORF100306 - 4.1 6.1 8.5 4.3 6.0 8.5 1.0 1 0 0 1 1 1 0 Presenilin OrfB_Zn_ribbon PF07282.11 ORF100306 - 4.8 7.2 10.0 4 7.4 0.3 2.5 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Sec62 PF03839.16 ORF100306 - 10 5.6 9.3 13 5.3 9.3 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 Stomagen PF16851.5 ORF100168 - 0.0069 16.4 0.3 0.012 15.6 0.3 1.4 1 0 0 1 1 1 1 Stomagen DUF4320 PF14208.6 NODE_39207_length_535_cov_1.864000_g31819_i0forward_frame_1 - 0.071 13.2 0.6 0.11 12.6 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4320) SBP_bac_5 PF00496.22 NODE_39206_length_535_cov_2.400000_g31818_i0reverse_frame_1 - 2.9e-45 154.9 4.3 3.1e-45 154.8 4.3 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Hum_adeno_E3A PF05393.11 NODE_39199_length_535_cov_2.882000_g31812_i0reverse_frame_1 - 0.014 15.4 3.2 0.029 14.3 3.2 1.6 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein RRN3 PF05327.11 NODE_39195_length_535_cov_3.836000_g31808_i0reverse_frame_1 - 1.7e-07 30.2 0.5 1.9e-07 30.1 0.5 1.1 1 0 0 1 1 1 1 RNA polymerase I specific transcription initiation factor RRN3 Ibs_toxin PF13956.6 NODE_39190_length_535_cov_7.142000_g31803_i0reverse_frame_1 - 9.9e-20 70.0 21.6 1.7e-11 43.7 6.2 2.2 2 0 0 2 2 2 2 Toxin Ibs, type I toxin-antitoxin system DUF515 PF04415.12 NODE_39190_length_535_cov_7.142000_g31803_i0reverse_frame_1 - 0.17 10.3 0.0 4.7 5.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF515) DUF2116 PF09889.9 NODE_39190_length_535_cov_7.142000_g31803_i0reverse_frame_1 - 0.88 9.6 4.5 7.7 6.6 0.4 2.3 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF5359 PF17313.2 NODE_39190_length_535_cov_7.142000_g31803_i0reverse_frame_1 - 9.1 6.4 9.8 6.4 6.8 1.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5359) RRM_1 PF00076.22 NODE_39181_length_535_cov_83.742000_g31794_i0forward_frame_1 - 2.1e-06 27.5 0.1 4e-06 26.5 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GAPT PF11770.8 NODE_39166_length_535_cov_158.398000_g31780_i0reverse_frame_1 - 3.2 7.6 4.8 6.1 6.7 4.2 1.7 1 1 1 2 2 2 0 GRB2-binding adapter (GAPT) F-box PF00646.33 NODE_39156_length_535_cov_308.006000_g31770_i0reverse_frame_1 - 0.00044 20.0 0.0 0.00078 19.3 0.0 1.4 1 0 0 1 1 1 1 F-box domain FNIP PF05725.12 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_1 - 2.9e-25 88.2 7.8 2e-12 47.0 0.2 2.1 2 0 0 2 2 2 2 FNIP Repeat Glyco_hydro_65C PF03633.15 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_1 - 0.34 10.8 0.9 34 4.4 0.0 3.4 4 0 0 4 4 4 0 Glycosyl hydrolase family 65, C-terminal domain Sp38 PF07354.12 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_1 - 0.091 12.2 13.0 0.33 10.4 4.4 2.3 1 1 2 3 3 3 0 Zona-pellucida-binding protein (Sp38) PI-PLC-C1 PF16670.5 NODE_39141_length_536_cov_2.335329_g31756_i0forward_frame_1 - 0.041 12.9 0.0 0.055 12.5 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide phospholipase C, Ca2+-dependent DUF2054 PF10218.9 NODE_39140_length_536_cov_2.341317_g31755_i0reverse_frame_1 - 0.11 12.5 1.0 0.69 10.0 1.4 1.8 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2054) PRIMA1 PF16101.5 NODE_39140_length_536_cov_2.341317_g31755_i0forward_frame_1 - 2 8.4 3.8 3.7 7.6 3.8 1.4 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Filament PF00038.21 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.0021 17.7 16.5 0.029 14.0 1.5 2.1 1 1 1 2 2 2 2 Intermediate filament protein GIT_CC PF16559.5 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.0062 16.4 1.7 0.18 11.7 1.0 2.5 2 0 0 2 2 2 1 GIT coiled-coil Rho guanine nucleotide exchange factor TolA_bind_tri PF16331.5 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.012 15.6 9.2 0.4 10.8 0.4 3.2 1 1 2 3 3 3 0 TolA binding protein trimerisation KASH_CCD PF14662.6 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.043 13.7 18.0 0.42 10.4 7.7 2.2 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH TACC_C PF05010.14 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.056 13.2 15.4 0.074 12.8 15.4 1.2 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HMMR_C PF15908.5 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.11 12.7 10.4 2.4 8.4 9.6 2.5 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal TSC22 PF01166.18 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.14 12.5 0.5 0.14 12.5 0.5 3.8 3 2 1 4 4 4 0 TSC-22/dip/bun family DUF1664 PF07889.12 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.16 12.0 9.6 1.7 8.7 1.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Jnk-SapK_ap_N PF09744.9 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.68 10.1 15.3 1.5 9.1 14.3 1.9 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Cep57_CLD_2 PF14197.6 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.93 9.6 14.7 0.11 12.6 5.2 3.6 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 Chibby PF14645.6 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 1.3 9.4 8.6 2.6 8.5 7.7 1.9 1 1 0 1 1 1 0 Chibby family DUF4140 PF13600.6 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 1.8 9.0 8.6 6.9 7.2 0.2 2.6 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) FAM76 PF16046.5 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 3.1 7.1 13.5 0.57 9.5 8.2 1.9 1 1 1 2 2 2 0 FAM76 protein Cut12 PF11500.8 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 4.2 7.3 11.7 1.5 8.8 8.7 1.8 1 1 1 2 2 2 0 Spindle pole body formation-associated protein DUF641 PF04859.12 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 5 7.5 13.6 4.1 7.7 4.6 2.4 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Phlebovirus_NSM PF07246.11 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 6.6 6.0 16.2 3.9e+02 0.2 16.2 2.1 1 1 0 1 1 1 0 Phlebovirus nonstructural protein NS-M ADIP PF11559.8 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 7.2 6.7 20.4 3.4 7.7 5.3 3.2 2 1 1 3 3 3 0 Afadin- and alpha -actinin-Binding DUF724 PF05266.14 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 9.9 5.9 16.7 3 7.6 1.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF724) V-ATPase_H_C PF11698.8 NODE_39118_length_536_cov_106.131737_g31734_i0forward_frame_1 - 0.026 14.6 0.9 0.046 13.8 0.6 1.6 1 1 0 1 1 1 0 V-ATPase subunit H Sulfotransfer_1 PF00685.27 NODE_39105_length_536_cov_249.323353_g31721_i0forward_frame_1 - 0.085 12.3 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 Sulfotransferase domain DUF1251 PF06856.11 NODE_39101_length_536_cov_342.732535_g31717_i0forward_frame_1 - 0.045 13.5 0.3 0.072 12.8 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1251) Arc_trans_TRASH PF08394.10 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_1 - 0.015 15.6 0.4 0.035 14.4 0.4 1.6 1 0 0 1 1 1 0 Archaeal TRASH domain Tnp_DNA_bind PF14706.6 NODE_39077_length_537_cov_6.834661_g31696_i0reverse_frame_1 - 0.14 12.1 0.0 0.29 11.0 0.0 1.5 1 0 0 1 1 1 0 Transposase DNA-binding Glyco_hydro_56 PF01630.18 NODE_39075_length_537_cov_16.081673_g31694_i0reverse_frame_1 - 0.0017 17.4 0.2 0.0022 17.1 0.2 1.1 1 0 0 1 1 1 1 Hyaluronidase zf-CSL PF05207.13 NODE_39053_length_537_cov_202.665339_g31673_i0forward_frame_1 - 0.035 13.8 2.1 0.07 12.9 2.1 1.5 1 0 0 1 1 1 0 CSL zinc finger Rhodanese PF00581.20 NODE_39025_length_538_cov_3.465209_g31648_i0reverse_frame_3 - 0.0024 18.4 0.0 0.0037 17.8 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain Ish1 PF10281.9 NODE_39025_length_538_cov_3.465209_g31648_i0reverse_frame_3 - 0.022 15.0 0.0 0.061 13.6 0.0 1.9 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein CBM49 PF09478.10 NODE_39024_length_538_cov_3.598410_g31647_i0forward_frame_2 - 0.19 12.0 3.5 0.77 10.1 0.1 2.7 3 0 0 3 3 3 0 Carbohydrate binding domain CBM49 DDE_Tnp_IS1 PF03400.13 NODE_39022_length_538_cov_4.560636_g31645_i0reverse_frame_3 - 1.4e-72 242.2 1.3 1.7e-72 241.9 1.3 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 NODE_39022_length_538_cov_4.560636_g31645_i0reverse_frame_3 - 0.019 15.2 0.3 0.053 13.8 0.3 1.7 1 1 0 1 1 1 0 DDE domain DUF5409 PF17421.2 NODE_39016_length_538_cov_77.570577_g31639_i0forward_frame_2 - 0.27 12.0 4.0 0.67 10.7 4.0 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5409) TAXi_N PF14543.6 NODE_39014_length_538_cov_83.045726_g31637_i0reverse_frame_2 - 1.3e-08 35.3 2.2 1.9e-08 34.7 2.2 1.3 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal IF-2B PF01008.17 NODE_39013_length_538_cov_83.976143_g31636_i0reverse_frame_3 - 1.8e-34 119.2 1.0 1.3e-33 116.5 1.0 1.9 1 1 0 1 1 1 1 Initiation factor 2 subunit family PAE PF03283.13 NODE_39006_length_538_cov_117.226640_g31629_i0forward_frame_3 - 0.00014 21.1 0.0 0.0002 20.6 0.0 1.1 1 0 0 1 1 1 1 Pectinacetylesterase DUF695 PF05117.12 NODE_38973_length_539_cov_2.632937_g31602_i0reverse_frame_3 - 0.031 14.4 0.4 0.063 13.4 0.3 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF695) DUF4952 PF16310.5 NODE_38968_length_539_cov_4.158730_g31597_i0forward_frame_2 - 0.23 11.7 1.8 0.76 10.1 0.9 2.0 2 0 0 2 2 2 0 Domian of unknown function (DUF4952) DUF2405 PF10293.9 NODE_38966_length_539_cov_64.382937_g31595_i0forward_frame_3 - 0.035 14.0 1.8 0.052 13.5 1.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2405) UPF0239 PF06783.11 NODE_38963_length_539_cov_80.087302_g31592_i0forward_frame_2 - 0.39 10.9 0.1 0.39 10.9 0.1 2.4 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0239) Histone PF00125.24 NODE_38957_length_539_cov_97.591270_g31586_i0forward_frame_2 - 7.5e-09 36.0 0.1 1.3e-08 35.2 0.1 1.4 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Glyco_hydro_125 PF06824.11 NODE_38954_length_539_cov_104.942460_g31364_i1reverse_frame_3 - 0.041 12.8 0.0 0.051 12.4 0.0 1.1 1 0 0 1 1 1 0 Metal-independent alpha-mannosidase (GH125) Elongin_A PF06881.11 NODE_38946_length_539_cov_177.501984_g768_i4forward_frame_3 - 0.014 15.9 1.7 0.014 15.9 1.7 2.2 1 1 1 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A Hep_core_N PF08290.11 NODE_38942_length_539_cov_215.309524_g31575_i0reverse_frame_3 - 0.13 12.2 0.5 0.34 10.9 0.5 1.8 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger Methyltransf_11 PF08241.12 NODE_38936_length_539_cov_530.007937_g31570_i0reverse_frame_3 - 0.073 13.7 0.6 0.56 10.9 0.0 2.2 1 1 1 2 2 2 0 Methyltransferase domain Ependymin PF00811.18 NODE_38936_length_539_cov_530.007937_g31570_i0forward_frame_3 - 0.097 12.9 0.4 0.15 12.4 0.4 1.3 1 1 0 1 1 1 0 Ependymin Gti1_Pac2 PF09729.9 NODE_38934_length_539_cov_690.886905_g29335_i1forward_frame_3 - 0.025 14.7 2.3 0.034 14.2 2.3 1.2 1 0 0 1 1 1 0 Gti1/Pac2 family SVIP PF15811.5 NODE_38934_length_539_cov_690.886905_g29335_i1forward_frame_2 - 0.00027 21.3 6.4 0.00048 20.5 6.4 1.3 1 0 0 1 1 1 1 Small VCP/p97-interacting protein EF-hand_7 PF13499.6 NODE_38925_length_540_cov_2.825743_g31563_i0reverse_frame_3 - 1.7e-05 25.2 0.0 3.7e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_38925_length_540_cov_2.825743_g31563_i0reverse_frame_3 - 0.008 16.0 0.0 0.057 13.4 0.0 2.3 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 NODE_38925_length_540_cov_2.825743_g31563_i0reverse_frame_3 - 0.0085 15.6 0.0 0.032 13.8 0.0 2.0 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 NODE_38925_length_540_cov_2.825743_g31563_i0reverse_frame_3 - 0.073 12.6 0.0 0.2 11.2 0.0 1.8 1 0 0 1 1 1 0 EF hand Peptidase_M35 PF02102.15 NODE_38925_length_540_cov_2.825743_g31563_i0forward_frame_3 - 0.023 13.6 0.9 0.031 13.2 0.9 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family LCE6A PF15858.5 NODE_38924_length_540_cov_3.035644_g31562_i0reverse_frame_2 - 0.28 11.9 4.6 9.9 7.0 1.4 2.3 2 0 0 2 2 2 0 Late cornified envelope protein 6A family Pyr_redox_2 PF07992.14 NODE_38923_length_540_cov_3.184158_g31561_i0reverse_frame_3 - 2.4e-13 50.0 0.0 2.7e-13 49.8 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_38923_length_540_cov_3.184158_g31561_i0reverse_frame_3 - 1.8e-07 31.6 0.0 3.7e-07 30.6 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 NODE_38923_length_540_cov_3.184158_g31561_i0reverse_frame_3 - 0.02 14.2 0.0 0.028 13.8 0.0 1.2 1 0 0 1 1 1 0 ThiF family K_oxygenase PF13434.6 NODE_38923_length_540_cov_3.184158_g31561_i0reverse_frame_3 - 0.027 13.6 0.1 0.15 11.2 0.0 1.8 1 1 1 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Myticin-prepro PF10690.9 NODE_38923_length_540_cov_3.184158_g31561_i0reverse_frame_2 - 5.3 7.4 10.9 0.21 11.8 4.3 1.9 2 0 0 2 2 2 0 Myticin pre-proprotein from the mussel DUF3369 PF11849.8 NODE_38922_length_540_cov_3.289109_g31560_i0forward_frame_3 - 0.015 15.5 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3369) PAS_7 PF12860.7 NODE_38919_length_540_cov_8.005941_g31557_i0reverse_frame_2 - 0.18 12.0 0.0 0.41 10.8 0.0 1.5 2 0 0 2 2 2 0 PAS fold PTCRA PF15028.6 NODE_38919_length_540_cov_8.005941_g31557_i0reverse_frame_2 - 0.18 11.5 1.3 14 5.4 0.1 2.5 2 1 1 3 3 3 0 Pre-T-cell antigen receptor DUF2818 PF10993.8 NODE_38912_length_540_cov_62.099010_g31550_i0reverse_frame_3 - 0.31 11.6 4.7 2.4 8.8 0.1 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2818) DUF4018 PF13210.6 NODE_38910_length_540_cov_70.334653_g31548_i0forward_frame_2 - 1 9.1 19.4 1.3 8.8 19.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) IL32 PF15225.6 NODE_38884_length_540_cov_423.158416_g31523_i1forward_frame_3 - 0.16 12.3 2.8 0.27 11.6 2.8 1.5 1 0 0 1 1 1 0 Interleukin 32 AI-2E_transport PF01594.16 NODE_38884_length_540_cov_423.158416_g31523_i1forward_frame_2 - 0.0039 16.4 0.0 0.0049 16.1 0.0 1.1 1 0 0 1 1 1 1 AI-2E family transporter Sec63 PF02889.16 NODE_38881_length_540_cov_477.378218_g31523_i0forward_frame_3 - 0.69 9.0 3.9 0.9 8.6 3.9 1.1 1 0 0 1 1 1 0 Sec63 Brl domain AI-2E_transport PF01594.16 NODE_38881_length_540_cov_477.378218_g31523_i0forward_frame_2 - 0.0032 16.7 0.0 0.004 16.4 0.0 1.1 1 0 0 1 1 1 1 AI-2E family transporter Trefoil PF00088.18 NODE_38878_length_540_cov_1192.390099_g31520_i0forward_frame_2 - 0.035 14.0 0.3 0.065 13.1 0.3 1.4 1 0 0 1 1 1 0 Trefoil (P-type) domain Fmp27_SW PF10305.9 ORF99011 - 0.0082 16.8 1.6 0.014 16.1 1.2 1.6 1 1 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain IL15 PF02372.15 ORF99011 - 0.089 12.8 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Interleukin 15 Vps16_N PF04841.13 ORF97180 - 4.9e-06 25.6 0.1 5.7e-06 25.3 0.1 1.1 1 0 0 1 1 1 1 Vps16, N-terminal region Img2 PF05046.14 ORF9695 - 0.056 13.7 0.0 0.077 13.3 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) ATE_N PF04376.13 ORF9340 - 0.12 12.8 0.1 0.22 11.9 0.1 1.4 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, N terminus ATG16 PF08614.11 ORF92948 - 0.0095 16.2 0.4 0.012 15.9 0.4 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) HDV_ag PF01517.18 ORF92948 - 0.017 15.0 0.5 0.02 14.7 0.5 1.1 1 0 0 1 1 1 0 Hepatitis delta virus delta antigen DUF4407 PF14362.6 ORF92948 - 0.018 14.4 0.2 0.023 14.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Tnp_22_trimer PF17489.2 ORF92948 - 0.15 12.1 1.8 0.17 11.9 0.3 1.8 2 0 0 2 2 2 0 L1 transposable element trimerization domain PTS_EIIB PF00367.20 ORF92948 - 0.21 11.1 2.7 0.25 10.9 0.0 2.5 3 0 0 3 3 3 0 phosphotransferase system, EIIB SGL PF08450.12 ORF92882 - 7.3e-36 124.0 0.0 1.1e-35 123.4 0.0 1.2 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Exostosin PF03016.15 ORF92117 - 2.6e-17 63.0 0.1 4.5e-17 62.2 0.1 1.3 2 0 0 2 2 2 1 Exostosin family Zeta_toxin PF06414.12 ORF92117 - 0.18 11.0 0.0 0.24 10.6 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin Isochorismatase PF00857.20 ORF92005 - 1.6e-18 67.5 0.0 2.3e-18 67.0 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family PTS_IIB PF02302.17 ORF917 - 0.03 15.0 0.0 0.047 14.4 0.0 1.3 1 0 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIB subunit Sugar_tr PF00083.24 ORF91511 - 7.7e-26 91.0 2.1 8.6e-26 90.8 2.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF91511 - 2.5e-14 53.0 2.3 2.8e-14 52.8 2.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF91511 - 0.023 13.6 2.6 0.025 13.4 2.1 1.3 1 1 0 1 1 1 0 MFS_1 like family WTF PF03303.13 ORF91511 - 0.42 10.3 7.6 0.04 13.6 3.2 1.5 2 0 0 2 2 2 0 WTF protein IMCp PF12314.8 ORF89784 - 0.0055 17.0 3.0 0.012 15.8 3.0 1.6 1 0 0 1 1 1 1 Inner membrane complex protein Goodbye PF17109.5 ORF89784 - 0.22 12.0 2.4 0.88 10.0 0.4 2.4 2 1 0 2 2 2 0 fungal STAND N-terminal Goodbye domain RCC1_2 PF13540.6 ORF89463 - 1.7e-08 34.0 9.0 0.067 13.0 0.2 4.1 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat PLN_propep PF16485.5 ORF89463 - 0.036 13.8 2.9 0.55 10.0 0.1 3.2 4 0 0 4 4 4 0 Protealysin propeptide PheRS_DBD2 PF18554.1 ORF89463 - 8.6 6.4 22.7 14 5.7 0.8 4.3 4 0 0 4 4 4 0 PheRS DNA binding domain 2 PPR_2 PF13041.6 ORF8885 - 1.4e-19 70.0 0.8 1.7e-09 37.7 0.0 4.1 3 1 1 4 4 4 4 PPR repeat family PPR PF01535.20 ORF8885 - 6.8e-17 60.5 1.8 6.6e-06 26.0 0.1 4.3 4 0 0 4 4 4 4 PPR repeat PPR_3 PF13812.6 ORF8885 - 1.2e-13 50.9 0.0 2.7e-08 33.8 0.0 4.0 2 1 2 4 4 4 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF8885 - 1.7e-06 27.6 1.9 0.092 12.5 0.0 3.5 3 1 0 3 3 3 2 PPR repeat PPR_long PF17177.4 ORF8885 - 2.5e-05 23.8 0.1 3.8e-05 23.1 0.1 1.4 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP Nucleopor_Nup85 PF07575.13 ORF8885 - 0.11 11.1 0.8 0.21 10.1 0.4 1.7 1 1 1 2 2 2 0 Nup85 Nucleoporin DUF3139 PF11337.8 ORF88041 - 0.24 12.1 2.6 0.49 11.1 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF2475 PF10629.9 ORF85118 - 0.12 12.6 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2475) Pkinase PF00069.25 ORF84438 - 6.1e-05 22.5 0.0 8.7e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain PfkB PF00294.24 ORF83948 - 2.2e-41 142.2 0.0 2.5e-41 141.9 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF83948 - 0.00096 18.6 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase MatE PF01554.18 ORF83401 - 3.3e-19 69.1 4.0 3.3e-19 69.1 4.0 1.9 2 0 0 2 2 2 1 MatE SNF2_N PF00176.23 ORF83379 - 4.7e-09 35.4 0.0 5.3e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 ORF83379 - 0.025 14.6 0.3 0.047 13.7 0.0 1.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit DJ-1_PfpI PF01965.24 ORF83336 - 8.7e-56 188.3 0.0 9.7e-56 188.1 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 ORF83336 - 0.00021 21.1 0.0 0.00025 20.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF83336 - 0.0026 17.6 0.0 0.0073 16.1 0.0 1.8 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 ORF83336 - 0.013 15.1 0.0 0.021 14.4 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 ORF83336 - 0.021 14.6 0.0 0.026 14.4 0.0 1.2 1 0 0 1 1 1 0 SNO glutamine amidotransferase family GATase_5 PF13507.6 ORF83336 - 0.21 10.7 0.0 0.39 9.8 0.0 1.6 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain SNF2_N PF00176.23 ORF82778 - 4.7e-09 35.4 0.0 5.3e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 ORF82778 - 0.025 14.6 0.3 0.047 13.7 0.0 1.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Gln_deamidase_2 PF18626.1 ORF82553 - 0.024 14.9 0.1 0.036 14.3 0.1 1.3 1 0 0 1 1 1 0 Glutaminase Nuc_sug_transp PF04142.15 ORF82495 - 4.6e-10 39.2 7.1 5.3e-10 39.0 7.1 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter CRT-like PF08627.10 ORF82495 - 0.00073 18.6 0.4 0.0009 18.3 0.4 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like EamA PF00892.20 ORF82495 - 0.0089 16.2 12.2 0.016 15.4 12.2 1.5 1 1 0 1 1 1 1 EamA-like transporter family Fumarate_red_D PF02313.17 ORF82495 - 0.092 12.9 4.6 0.16 12.1 3.8 1.9 1 1 0 1 1 1 0 Fumarate reductase subunit D Multi_Drug_Res PF00893.19 ORF82495 - 0.16 12.6 7.2 2.4 8.9 4.4 2.2 1 1 1 2 2 2 0 Small Multidrug Resistance protein ADH_zinc_N PF00107.26 ORF81192 - 1.4e-08 34.8 0.0 1.9e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF81192 - 0.00092 20.3 0.0 0.0024 18.9 0.0 1.6 1 1 0 1 1 1 1 Zinc-binding dehydrogenase WD40 PF00400.32 ORF80471 - 9.3e-16 57.9 0.0 1.8e-06 28.5 0.0 2.3 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF80471 - 0.00084 19.6 0.0 0.018 15.3 0.0 2.2 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain LisH PF08513.11 ORF80471 - 0.0089 16.0 1.0 0.018 15.0 1.0 1.6 1 0 0 1 1 1 1 LisH MAD PF05557.13 ORF80471 - 0.023 13.1 0.1 0.028 12.8 0.1 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein Csm1_N PF18504.1 ORF80471 - 0.08 13.3 0.4 0.17 12.2 0.4 1.5 1 0 0 1 1 1 0 Csm1 N-terminal domain Fmp27_SW PF10305.9 ORF79973 - 0.092 13.5 0.1 0.15 12.8 0.1 1.5 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain PI3_PI4_kinase PF00454.27 ORF79005 - 3.5e-22 79.4 2.2 3.9e-22 79.3 2.2 1.0 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF5017 PF16409.5 ORF79005 - 0.096 12.2 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5017) MatE PF01554.18 ORF77182 - 3.3e-19 69.1 4.0 3.3e-19 69.1 4.0 1.9 2 0 0 2 2 2 1 MatE Pkinase PF00069.25 ORF75223 - 4.2e-23 82.1 0.0 5.1e-23 81.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF75223 - 8.6e-06 25.2 0.0 1.3e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Sigma70_r2 PF04542.14 ORF75223 - 0.16 11.7 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 region 2 zf-CCHC PF00098.23 ORF74687 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF74687 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF74687 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF74687 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF74687 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF74687 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle RPN6_C_helix PF18503.1 ORF74591 - 0.029 14.1 0.2 3.3 7.5 0.1 2.4 2 0 0 2 2 2 0 26S proteasome subunit RPN6 C-terminal helix domain GGDEF PF00990.21 ORF74172 - 9.2e-47 158.8 0.0 1.1e-46 158.5 0.0 1.1 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 ORF74172 - 0.0014 18.8 0.1 0.004 17.4 0.0 1.7 1 1 1 2 2 2 1 GGDEF-like domain Arrestin_N PF00339.29 ORF74004 - 6.6e-14 52.2 0.1 8.3e-14 51.9 0.1 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 ORF74004 - 0.0024 17.6 0.0 0.0043 16.8 0.0 1.3 1 0 0 1 1 1 1 Arrestin_N terminal like Arrestin_C PF02752.22 ORF74004 - 0.0081 16.6 0.3 0.013 16.0 0.3 1.3 1 1 0 1 1 1 1 Arrestin (or S-antigen), C-terminal domain Connexin PF00029.19 ORF73131 - 0.033 13.9 1.7 0.049 13.4 1.7 1.3 1 0 0 1 1 1 0 Connexin DUF3671 PF12420.8 ORF73131 - 0.12 12.4 1.9 0.12 12.4 0.5 1.7 1 1 1 2 2 2 0 Protein of unknown function DUF4199 PF13858.6 ORF73131 - 0.23 11.9 1.2 0.32 11.4 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) Mac PF12464.8 ORF73131 - 1.2 9.4 5.4 30 5.0 1.7 3.1 2 1 0 2 2 2 0 Maltose acetyltransferase FKBP_C PF00254.28 ORF71404 - 1.3e-07 31.9 0.0 3.7e-07 30.4 0.0 1.7 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase LRR_6 PF13516.6 ORF70704 - 7.5e-11 41.2 5.4 0.00073 19.4 0.0 5.9 6 0 0 6 6 6 3 Leucine Rich repeat LRR_4 PF12799.7 ORF70704 - 2.4e-07 31.0 0.0 0.069 13.6 0.0 3.5 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF70704 - 5.6e-06 26.2 1.2 7.3 7.6 0.1 5.5 6 0 0 6 6 6 2 Leucine Rich Repeat WES_acyltransf PF03007.16 ORF70240 - 5.8e-05 23.0 0.0 9e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain zf-CCHC PF00098.23 ORF68794 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF68794 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF68794 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF68794 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF68794 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF68794 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle zf-CCHC PF00098.23 ORF67930 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF67930 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF67930 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF67930 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF67930 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF67930 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle DUF3352 PF11832.8 ORF67110 - 0.00083 18.1 1.9 0.0022 16.7 0.1 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF3352) Fmp27_SW PF10305.9 ORF64013 - 0.0082 16.8 1.6 0.014 16.1 1.2 1.6 1 1 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain IL15 PF02372.15 ORF64013 - 0.089 12.8 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Interleukin 15 PP1_inhibitor PF05361.12 ORF63211 - 0.029 14.3 0.0 0.049 13.6 0.0 1.4 1 0 0 1 1 1 0 PKC-activated protein phosphatase-1 inhibitor GCR1_C PF12550.8 ORF63211 - 0.082 13.2 1.4 0.26 11.6 1.3 1.9 1 1 0 1 1 1 0 Transcriptional activator of glycolytic enzymes Gln_deamidase_2 PF18626.1 ORF6161 - 0.024 14.9 0.1 0.036 14.3 0.1 1.3 1 0 0 1 1 1 0 Glutaminase SBP_bac_3 PF00497.20 ORF61022 - 4.4e-53 180.0 0.5 4.9e-53 179.9 0.5 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 ORF61022 - 3.2e-09 37.0 0.0 6.2e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 ORF61022 - 0.0025 17.8 0.6 0.006 16.6 0.5 1.7 1 1 0 1 1 1 1 NMT1/THI5 like Peptidase_C2 PF00648.21 ORF5765 - 7.8e-23 80.9 0.6 1.3e-22 80.2 0.0 1.5 1 1 0 2 2 2 1 Calpain family cysteine protease Bac_chlorC PF02043.17 ORF5765 - 0.1 12.6 0.0 3 7.9 0.0 2.2 2 0 0 2 2 2 0 Bacteriochlorophyll C binding protein Pkinase PF00069.25 ORF55732 - 2e-12 47.1 0.0 2.4e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF55732 - 1.6e-06 27.6 0.0 1.9e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase PilN PF05137.13 ORF53758 - 2.9e-09 36.9 1.1 2.3e-08 34.0 0.1 2.1 2 0 0 2 2 2 1 Fimbrial assembly protein (PilN) Tmemb_161AB PF10268.9 ORF53758 - 0.042 12.5 0.3 0.05 12.2 0.3 1.1 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB EF-hand_4 PF12763.7 ORF53285 - 0.0001 22.2 0.0 0.00015 21.6 0.0 1.3 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand DUF5051 PF16473.5 ORF53285 - 0.0012 18.8 0.0 0.0016 18.4 0.0 1.1 1 0 0 1 1 1 1 3' exoribonuclease, RNase T-like Agenet PF05641.12 ORF53285 - 0.054 14.0 0.2 8.3 7.0 0.1 2.3 2 0 0 2 2 2 0 Agenet domain Myosin_N PF02736.19 ORF53285 - 0.14 12.0 0.3 7 6.6 0.0 2.9 3 0 0 3 3 3 0 Myosin N-terminal SH3-like domain DUF2093 PF09866.9 ORF53285 - 0.24 10.9 1.8 0.45 10.0 1.8 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2093) PqiA PF04403.13 ORF52894 - 9.9e-12 45.0 0.8 9.9e-12 45.0 0.8 1.5 2 0 0 2 2 2 1 Paraquat-inducible protein A DUF805 PF05656.14 ORF52894 - 0.55 10.7 6.5 6.6 7.2 6.5 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF805) Connexin PF00029.19 ORF51096 - 0.033 14.0 1.7 0.049 13.4 1.7 1.3 1 0 0 1 1 1 0 Connexin DUF3671 PF12420.8 ORF51096 - 0.13 12.3 2.4 0.11 12.6 0.6 1.7 1 1 1 2 2 2 0 Protein of unknown function DUF4199 PF13858.6 ORF51096 - 0.18 12.2 1.0 0.3 11.5 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) CTNNBL PF08216.11 ORF51096 - 0.27 11.4 5.5 0.26 11.5 3.9 1.8 1 1 1 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear Mac PF12464.8 ORF51096 - 1.2 9.4 5.4 30 5.0 1.7 3.1 2 1 0 2 2 2 0 Maltose acetyltransferase V_ATPase_I PF01496.19 ORF49233 - 0.8 7.5 7.6 0.94 7.3 7.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DIT1_PvcA PF05141.12 ORF49233 - 1.1 8.6 5.9 1.5 8.2 5.9 1.1 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein ubiquitin PF00240.23 ORF49 - 0.00014 21.6 0.2 0.00053 19.7 0.0 1.9 2 0 0 2 2 2 1 Ubiquitin family Ribosomal_L34e PF01199.18 ORF48137 - 0.068 13.5 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein L34e COPI_assoc PF08507.10 ORF48043 - 0.88 9.6 14.9 0.11 12.6 7.3 2.1 1 1 1 2 2 2 0 COPI associated protein CTV_P6 PF06706.11 ORF48043 - 1.9 8.2 6.3 1.6 8.5 0.4 2.6 3 0 0 3 3 3 0 Citrus tristeza virus 6-kDa protein Fmp27_SW PF10305.9 ORF46167 - 0.0082 16.8 1.6 0.014 16.1 1.2 1.6 1 1 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain IL15 PF02372.15 ORF46167 - 0.089 12.8 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Interleukin 15 CBP_BcsG PF11658.8 ORF45985 - 0.34 9.3 4.9 0.46 8.8 4.9 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG Trp_oprn_chp PF09534.10 ORF45985 - 0.49 10.2 12.8 0.75 9.6 12.8 1.3 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF3487 PF11990.8 ORF45985 - 1.1 9.2 9.7 2.2 8.2 9.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DUF3040 PF11239.8 ORF45985 - 1.6 9.1 9.7 4.6 7.6 7.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) Phage_term_smal PF05944.12 ORF45595 - 0.063 13.2 0.0 0.084 12.8 0.0 1.2 1 0 0 1 1 1 0 Phage small terminase subunit zf-CCHC PF00098.23 ORF45148 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF45148 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF45148 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF45148 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF45148 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF45148 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle VHP PF02209.19 ORF43846 - 0.028 14.5 0.2 0.063 13.4 0.2 1.6 1 0 0 1 1 1 0 Villin headpiece domain FKBP_C PF00254.28 ORF43450 - 1.3e-07 31.9 0.0 3.7e-07 30.4 0.0 1.7 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Metallophos PF00149.28 ORF43402 - 3.1e-15 57.2 0.0 4.4e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase CutA1 PF03091.15 ORF41402 - 4.6e-11 42.4 8.9 5.2e-08 32.7 0.9 3.1 1 1 2 3 3 3 2 CutA1 divalent ion tolerance protein DUF3853 PF12964.7 ORF41402 - 0.054 13.7 0.1 0.2 11.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3853) CIA30 PF08547.12 ORF41389 - 1.4e-22 80.4 0.1 1.6e-22 80.2 0.1 1.1 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) MFS_3 PF05977.13 ORF41389 - 0.11 10.8 0.0 0.15 10.5 0.0 1.1 1 0 0 1 1 1 0 Transmembrane secretion effector P22_AR_C PF10548.9 ORF41142 - 0.056 13.6 0.0 0.14 12.4 0.0 1.7 2 0 0 2 2 2 0 P22AR C-terminal domain DUF2312 PF10073.9 ORF41142 - 0.14 11.8 1.7 4.2 7.1 0.2 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) U-box PF04564.15 ORF39965 - 8.4e-08 32.3 0.1 2.2e-07 30.9 0.0 1.7 2 0 0 2 2 2 1 U-box domain zf-Nse PF11789.8 ORF39965 - 0.00084 19.1 0.0 0.02 14.7 0.0 2.3 1 1 1 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit PPDK_N PF01326.19 ORF39965 - 0.014 14.6 0.4 0.018 14.3 0.4 1.1 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RLAN PF14401.6 ORF39965 - 0.028 14.1 0.0 0.039 13.6 0.0 1.2 1 0 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain T3SS_NleG PF06416.12 ORF39965 - 0.076 12.9 0.1 0.19 11.6 0.1 1.7 1 1 0 1 1 1 0 Effector protein NleG CnrY PF17524.2 ORF38850 - 0.015 15.5 0.3 0.035 14.3 0.2 1.7 1 1 0 1 1 1 0 Anti-sigma factor CnrY zf-CCHC PF00098.23 ORF36212 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF36212 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF36212 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF36212 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF36212 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF36212 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle adh_short PF00106.25 ORF35939 - 2.6e-21 76.0 0.0 3e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF35939 - 1.5e-15 57.4 0.0 1.8e-15 57.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase GAS2 PF02187.17 ORF3427 - 0.0011 19.0 0.0 0.0017 18.4 0.0 1.3 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain Sds3 PF08598.11 ORF3427 - 0.044 13.8 0.0 2.3 8.2 0.0 2.1 2 0 0 2 2 2 0 Sds3-like SNF2_N PF00176.23 ORF33778 - 4.7e-09 35.4 0.0 5.3e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 ORF33778 - 0.025 14.6 0.3 0.047 13.7 0.0 1.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit zf-CCHC PF00098.23 ORF3323 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF3323 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF3323 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF3323 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF3323 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF3323 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle EamA PF00892.20 ORF32883 - 9.2e-14 51.8 7.5 9.2e-14 51.8 7.5 2.0 2 0 0 2 2 2 1 EamA-like transporter family zf-CCHC PF00098.23 ORF31542 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF31542 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF31542 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF31542 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF31542 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF31542 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle Ion_trans PF00520.31 ORF30834 - 0.032 13.5 1.6 0.038 13.2 1.6 1.1 1 0 0 1 1 1 0 Ion transport protein HALZ PF02183.18 ORF30826 - 0.11 12.7 1.7 0.22 11.8 0.8 1.9 2 0 0 2 2 2 0 Homeobox associated leucine zipper BSD PF03909.17 ORF30429 - 0.14 12.2 0.2 0.23 11.5 0.2 1.4 1 0 0 1 1 1 0 BSD domain CnrY PF17524.2 ORF28912 - 0.015 15.5 0.3 0.035 14.3 0.2 1.7 1 1 0 1 1 1 0 Anti-sigma factor CnrY TPR_1 PF00515.28 ORF2884 - 0.0057 16.4 2.3 0.017 14.9 2.3 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat Sec16_C PF12931.7 ORF2884 - 0.011 15.5 0.6 0.016 14.9 0.5 1.3 1 1 0 1 1 1 0 Sec23-binding domain of Sec16 TPR_2 PF07719.17 ORF2884 - 0.016 15.3 1.6 0.057 13.6 1.6 1.9 1 0 0 1 1 1 0 Tetratricopeptide repeat Cytochrom_B562 PF07361.11 ORF2884 - 0.18 12.5 4.2 0.82 10.4 0.0 2.7 2 1 0 2 2 2 0 Cytochrome b562 TPR_8 PF13181.6 ORF2884 - 1.9 8.9 9.7 0.21 11.9 1.6 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat ETF PF01012.21 ORF28311 - 6.1e-14 52.3 0.0 7.7e-14 52.0 0.0 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain RRM_1 PF00076.22 ORF27637 - 0.00042 20.1 0.0 0.00065 19.5 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CT_C_D PF02682.16 ORF26657 - 2.4e-63 213.6 0.0 2.7e-63 213.4 0.0 1.0 1 0 0 1 1 1 1 Carboxyltransferase domain, subdomain C and D MatE PF01554.18 ORF25759 - 3.3e-19 69.1 4.0 3.3e-19 69.1 4.0 1.9 2 0 0 2 2 2 1 MatE AAA PF00004.29 ORF24783 - 4.2e-11 43.4 0.6 4.6e-10 40.0 0.6 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF24783 - 2.9e-08 34.1 0.0 4.1e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF24783 - 2.5e-05 24.6 0.0 4.8e-05 23.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF24783 - 0.00027 21.4 0.0 0.00062 20.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain TniB PF05621.11 ORF24783 - 0.00058 19.3 0.3 0.06 12.8 0.0 2.1 2 0 0 2 2 2 1 Bacterial TniB protein ATPase_2 PF01637.18 ORF24783 - 0.0016 18.4 1.5 0.0021 18.0 1.5 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 ORF24783 - 0.002 18.1 0.0 0.38 10.7 0.0 2.2 2 0 0 2 2 2 1 NTPase DEAD PF00270.29 ORF24783 - 0.0021 17.9 0.1 0.0029 17.4 0.1 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Viral_helicase1 PF01443.18 ORF24783 - 0.0033 17.2 0.0 0.12 12.1 0.0 2.2 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 ORF24783 - 0.0033 17.1 0.0 0.02 14.6 0.0 2.1 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.17 ORF24783 - 0.0037 17.4 0.4 0.0049 17.0 0.4 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain DUF2075 PF09848.9 ORF24783 - 0.0043 16.4 0.0 0.0058 15.9 0.0 1.5 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) ATPase PF06745.13 ORF24783 - 0.0044 16.4 3.7 0.14 11.5 0.2 2.5 1 1 1 3 3 3 1 KaiC Elong_Iki1 PF10483.9 ORF24783 - 0.0054 16.3 1.0 0.047 13.2 0.2 2.0 1 1 1 2 2 2 1 Elongator subunit Iki1 KAP_NTPase PF07693.14 ORF24783 - 0.0078 15.5 0.3 0.13 11.4 0.3 2.1 1 1 0 1 1 1 1 KAP family P-loop domain CLP1_P PF16575.5 ORF24783 - 0.018 14.9 0.1 0.04 13.7 0.0 1.6 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop RNA_helicase PF00910.22 ORF24783 - 0.03 14.7 0.1 0.44 11.0 0.0 2.2 1 1 0 2 2 2 0 RNA helicase NACHT PF05729.12 ORF24783 - 0.038 13.9 0.1 0.39 10.6 0.1 2.1 1 1 0 1 1 1 0 NACHT domain AAA_11 PF13086.6 ORF24783 - 0.038 13.8 0.1 0.084 12.7 0.0 1.6 1 1 0 2 2 2 0 AAA domain AAA_7 PF12775.7 ORF24783 - 0.077 12.5 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 ORF24783 - 0.085 12.8 0.0 3.9 7.5 0.0 2.4 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 ORF24783 - 0.086 13.4 0.5 0.13 12.7 0.5 1.6 1 1 0 1 1 1 0 ABC transporter Fmp27_SW PF10305.9 ORF24217 - 0.0082 16.8 1.6 0.014 16.1 1.2 1.6 1 1 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain IL15 PF02372.15 ORF24217 - 0.089 12.8 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Interleukin 15 Abhydrolase_6 PF12697.7 ORF22252 - 0.0047 17.6 1.6 0.0061 17.2 1.6 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family zf-CCHC PF00098.23 ORF21057 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF21057 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF21057 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF21057 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF21057 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF21057 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle GFO_IDH_MocA_C PF02894.17 ORF20944 - 0.015 15.3 0.0 0.033 14.2 0.0 1.6 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain Phage_terminase PF10668.9 ORF20098 - 0.9 9.6 4.6 0.72 9.9 0.5 2.6 2 1 0 2 2 2 0 Phage terminase small subunit zf-CCHC PF00098.23 ORF19998 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF19998 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF19998 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF19998 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF19998 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF19998 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle Type2_restr_D3 PF16902.5 ORF19879 - 0.073 13.0 0.9 0.68 9.9 0.0 2.9 2 2 0 2 2 2 0 Type-2 restriction enzyme D3 domain ADH_zinc_N_2 PF13602.6 ORF1886 - 4.9e-08 34.1 0.0 8.7e-08 33.3 0.0 1.4 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 ORF1886 - 0.0018 18.3 0.0 0.0023 17.9 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase HGTP_anticodon PF03129.20 ORF14165 - 4.6e-08 33.1 0.1 7.7e-08 32.4 0.1 1.3 1 0 0 1 1 1 1 Anticodon binding domain LRR_6 PF13516.6 ORF14142 - 3.1e-08 33.0 1.5 0.051 13.7 0.0 3.9 4 0 0 4 4 4 3 Leucine Rich repeat LRR_4 PF12799.7 ORF14142 - 0.018 15.5 0.7 7.5 7.1 0.0 3.2 3 1 0 3 3 3 0 Leucine Rich repeats (2 copies) Pox_L5 PF04872.13 ORF14142 - 0.04 13.8 0.6 0.12 12.3 0.2 1.9 2 0 0 2 2 2 0 Poxvirus L5 protein family LRR_1 PF00560.33 ORF14142 - 0.053 14.1 0.0 44 5.2 0.0 3.6 3 0 0 3 3 3 0 Leucine Rich Repeat Fucose_iso_C PF02952.17 ORF13706 - 1.3e-52 177.3 0.0 1.8e-52 176.9 0.0 1.1 1 0 0 1 1 1 1 L-fucose isomerase, C-terminal domain Glyoxalase PF00903.25 ORF11248 - 3.5e-21 75.7 0.1 1.9e-19 70.1 0.1 2.1 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF11248 - 1.3e-06 28.7 0.0 2.5e-06 27.7 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 ORF11248 - 0.00027 21.7 0.0 0.00041 21.1 0.0 1.3 1 0 0 1 1 1 1 Glyoxalase-like domain ATHILA PF03078.15 ORF111255 - 0.09 11.6 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 ATHILA ORF-1 family TPR_MLP1_2 PF07926.12 ORF109950 - 5.3e-06 26.5 21.9 0.0032 17.5 10.4 2.1 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein FPP PF05911.11 ORF109950 - 0.011 14.0 21.2 0.021 13.0 21.2 1.4 1 1 0 1 1 1 0 Filament-like plant protein, long coiled-coil CREPT PF16566.5 ORF109950 - 0.026 14.7 2.7 0.026 14.7 2.7 2.8 2 1 1 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour DUF4407 PF14362.6 ORF109950 - 0.11 11.8 13.3 0.056 12.8 6.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) SHE3 PF17078.5 ORF109950 - 0.12 12.1 30.2 0.58 9.8 5.4 2.8 1 1 2 3 3 3 0 SWI5-dependent HO expression protein 3 DUF3450 PF11932.8 ORF109950 - 0.13 11.6 18.4 0.57 9.5 3.9 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) CENP-F_leu_zip PF10473.9 ORF109950 - 0.14 12.1 27.0 0.43 10.6 10.4 2.3 1 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cnn_1N PF07989.11 ORF109950 - 0.72 10.1 20.9 0.18 12.0 3.1 3.1 1 1 2 3 3 3 0 Centrosomin N-terminal motif 1 DUF2935 PF11155.8 ORF109950 - 0.72 10.2 9.6 0.92 9.8 2.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) ApoO PF09769.9 ORF109950 - 0.74 9.8 5.7 5.8 6.9 0.7 2.5 2 1 0 3 3 3 0 Apolipoprotein O bZIP_1 PF00170.21 ORF109950 - 1.3 9.2 23.5 2.1 8.5 6.8 3.8 2 2 2 4 4 4 0 bZIP transcription factor BRE1 PF08647.11 ORF109950 - 1.6 8.9 27.1 8.1 6.6 7.8 3.3 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase Fib_alpha PF08702.10 ORF109950 - 2.1 8.5 24.8 0.26 11.5 11.7 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF1759 PF03564.15 ORF109950 - 2.6 8.0 12.5 0.3 11.0 4.1 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1759) HAUS-augmin3 PF14932.6 ORF109950 - 2.6 7.5 19.1 1.5 8.4 6.0 2.1 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 HSBP1 PF06825.12 ORF109950 - 3.1 7.7 6.3 23 5.0 0.4 3.5 4 0 0 4 4 4 0 Heat shock factor binding protein 1 Spc7 PF08317.11 ORF109950 - 3.8 6.3 24.9 0.58 9.0 13.7 2.0 1 1 0 2 2 2 0 Spc7 kinetochore protein ACCA PF03255.14 ORF109950 - 7.8 6.4 19.9 0.87 9.5 3.9 3.1 1 1 2 3 3 3 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF4200 PF13863.6 ORF109950 - 9.4 6.7 31.3 2.1 8.8 14.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) YodL PF14191.6 ORF108409 - 0.098 13.5 0.8 0.34 11.8 0.3 1.9 2 0 0 2 2 2 0 YodL-like zf-CCHC PF00098.23 ORF107197 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF107197 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF107197 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF107197 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF107197 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF107197 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle zf-CCHC PF00098.23 ORF10578 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF10578 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF10578 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF10578 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF10578 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF10578 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle Trp_dioxygenase PF03301.13 ORF105065 - 0.026 13.9 5.6 0.023 14.0 3.7 1.6 1 1 1 2 2 2 0 Tryptophan 2,3-dioxygenase DUF4407 PF14362.6 ORF105065 - 0.37 10.1 5.1 0.47 9.7 5.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Ribosomal_S8e PF01201.22 ORF105065 - 6 7.0 5.9 0.59 10.3 1.6 1.5 2 0 0 2 2 2 0 Ribosomal protein S8e DUF5638 PF18688.1 ORF104148 - 0.0096 16.2 0.6 0.017 15.4 0.6 1.5 1 1 0 1 1 1 1 Family of unknown function (DUF5638) XisH PF08814.10 ORF104148 - 0.02 15.0 0.2 0.026 14.7 0.2 1.2 1 0 0 1 1 1 0 XisH protein LETM1 PF07766.13 ORF104148 - 0.024 14.0 0.1 0.036 13.4 0.1 1.2 1 0 0 1 1 1 0 LETM1-like protein LPP20 PF02169.16 ORF104148 - 0.07 13.5 1.4 0.1 12.9 1.4 1.3 1 0 0 1 1 1 0 LPP20 lipoprotein PG_binding_1 PF01471.18 ORF104148 - 0.071 13.3 0.1 1 9.6 0.0 2.2 2 0 0 2 2 2 0 Putative peptidoglycan binding domain DUF3139 PF11337.8 ORF103764 - 0.21 12.3 2.3 0.49 11.1 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF4829 PF16111.5 ORF103764 - 0.54 11.1 4.2 1.2 9.9 2.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4829) CnrY PF17524.2 ORF100664 - 0.015 15.5 0.3 0.035 14.3 0.2 1.7 1 1 0 1 1 1 0 Anti-sigma factor CnrY Peptidase_M1_N PF17900.1 ORF100108 - 9.1e-13 48.8 0.0 4.9e-12 46.4 0.0 1.8 1 1 1 2 2 2 1 Peptidase M1 N-terminal domain SOBP PF15279.6 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_1 - 0.25 11.9 0.9 0.3 11.7 0.9 1.1 1 0 0 1 1 1 0 Sine oculis-binding protein Amnionless PF14828.6 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.047 12.5 2.4 0.069 12.0 2.4 1.3 1 0 0 1 1 1 0 Amnionless Wzy_C PF04932.15 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.071 12.7 1.3 0.078 12.6 1.3 1.3 1 0 0 1 1 1 0 O-Antigen ligase FA_desaturase PF00487.24 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.4 10.5 2.6 0.47 10.2 2.6 1.2 1 0 0 1 1 1 0 Fatty acid desaturase DUF1700 PF08006.11 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.42 10.1 12.1 0.56 9.7 12.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) SSP160 PF06933.11 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.75 7.9 14.6 1 7.5 14.6 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Promethin PF16015.5 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 1.6 8.7 22.4 3.1 7.8 22.4 1.4 1 0 0 1 1 1 0 Promethin DUF2207 PF09972.9 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 3.4 6.3 7.5 4.2 6.0 7.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Trp_oprn_chp PF09534.10 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 6.9 6.4 18.1 9.8 5.9 18.1 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks117.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks117.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks117.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks117.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Methyltransf_32 PF13679.6 NODE_39348_length_532_cov_217.587525_g31950_i0reverse_frame_1 - 0.00022 21.2 0.2 0.00043 20.3 0.2 1.5 1 0 0 1 1 1 1 Methyltransferase domain Zn_ribbon_17 PF17120.5 NODE_39333_length_533_cov_1.923695_g31937_i0reverse_frame_1 - 0.041 13.5 0.1 0.083 12.5 0.1 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type SPATA25 PF15218.6 NODE_39332_length_533_cov_1.971888_g31936_i0reverse_frame_1 - 0.02 14.7 1.5 0.031 14.0 1.5 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 25 Prim_Zn_Ribbon PF08273.12 NODE_39332_length_533_cov_1.971888_g31936_i0reverse_frame_1 - 0.13 12.6 4.4 2 8.8 0.5 2.6 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase p12I PF12233.8 NODE_39330_length_533_cov_1.995984_g31934_i0reverse_frame_1 - 0.34 11.4 7.3 0.41 11.2 6.3 1.5 1 1 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein Mit_KHE1 PF10173.9 NODE_39330_length_533_cov_1.995984_g31934_i0forward_frame_1 - 0.14 12.3 6.0 0.18 11.9 6.0 1.2 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related DUF2534 PF10749.9 NODE_39329_length_533_cov_2.018072_g31933_i0forward_frame_1 - 2.5e-13 50.0 0.2 4.5e-13 49.2 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2534) DUF829 PF05705.14 NODE_39319_length_533_cov_3.124498_g31923_i0reverse_frame_1 - 0.006 16.5 0.4 0.0086 16.0 0.4 1.2 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF829) PEX11 PF05648.14 NODE_39319_length_533_cov_3.124498_g31923_i0forward_frame_1 - 1.2e-06 28.2 0.9 1.2e-06 28.2 0.9 1.9 1 1 1 2 2 2 1 Peroxisomal biogenesis factor 11 (PEX11) G0-G1_switch_2 PF15103.6 NODE_39319_length_533_cov_3.124498_g31923_i0forward_frame_1 - 0.029 14.8 1.0 0.12 12.8 0.9 1.8 1 1 1 2 2 2 0 G0/G1 switch protein 2 YafO_toxin PF13957.6 NODE_39317_length_533_cov_3.578313_g31921_i0reverse_frame_1 - 3e-27 94.6 0.0 3.9e-27 94.2 0.0 1.2 1 0 0 1 1 1 1 Toxin YafO, type II toxin-antitoxin system Peptidase_C24 PF03510.14 NODE_39315_length_533_cov_4.176707_g31919_i0reverse_frame_1 - 0.035 14.6 0.0 0.063 13.8 0.0 1.4 1 0 0 1 1 1 0 2C endopeptidase (C24) cysteine protease family UNC-93 PF05978.16 NODE_39311_length_533_cov_41.554217_g31915_i0forward_frame_1 - 0.24 11.1 3.3 0.37 10.5 3.3 1.3 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 LPP PF04728.13 NODE_39308_length_533_cov_57.275100_g31912_i0reverse_frame_1 - 0.066 13.6 1.0 0.15 12.4 0.1 2.1 2 0 0 2 2 2 0 Lipoprotein leucine-zipper Methyltransf_11 PF08241.12 NODE_39269_length_533_cov_381.887550_g31877_i0forward_frame_1 - 2.8e-16 59.9 0.0 3.8e-16 59.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_39269_length_533_cov_381.887550_g31877_i0forward_frame_1 - 2.4e-15 56.6 0.0 2.8e-15 56.4 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_39269_length_533_cov_381.887550_g31877_i0forward_frame_1 - 3.4e-15 56.5 0.0 5.5e-15 55.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_39269_length_533_cov_381.887550_g31877_i0forward_frame_1 - 5.7e-07 30.2 0.0 8.9e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_39269_length_533_cov_381.887550_g31877_i0forward_frame_1 - 7.3e-07 29.2 0.0 9.7e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 NODE_39269_length_533_cov_381.887550_g31877_i0forward_frame_1 - 0.0014 18.3 0.0 0.002 17.7 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.14 NODE_39269_length_533_cov_381.887550_g31877_i0forward_frame_1 - 0.053 13.1 0.0 0.07 12.7 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase small domain TPMT PF05724.11 NODE_39269_length_533_cov_381.887550_g31877_i0forward_frame_1 - 0.12 12.1 0.0 0.33 10.6 0.0 1.7 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DXP_redisom_C PF08436.12 NODE_39264_length_533_cov_23888.481928_g31872_i0forward_frame_1 - 0.15 12.3 0.0 0.24 11.6 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain zf-CCCH PF00642.24 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 3.3e-15 55.5 15.6 4e-11 42.5 4.7 2.7 2 1 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 2.5e-07 30.5 5.2 2.5e-07 30.5 5.2 3.0 3 0 0 3 3 3 2 Zinc finger domain zf-CCCH_4 PF18044.1 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 4.3e-07 29.6 3.6 4.3e-07 29.6 3.6 2.3 2 0 0 2 2 2 1 CCCH-type zinc finger zf-CCCH_2 PF14608.6 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 2.7e-06 27.6 10.8 0.00028 21.2 3.7 2.5 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Torus PF16131.5 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 0.0023 18.6 0.5 0.14 12.8 0.1 2.3 2 0 0 2 2 2 1 Torus domain zf-CCCH_3 PF15663.5 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 0.042 14.1 0.4 0.27 11.5 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger containing family DUF4575 PF15143.6 NODE_39260_length_534_cov_2.637275_g31868_i0reverse_frame_1 - 0.013 15.7 1.9 0.013 15.7 1.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4575) DUF2126 PF09899.9 NODE_39259_length_534_cov_2.679359_g31867_i0reverse_frame_1 - 0.088 10.9 0.1 0.1 10.6 0.1 1.0 1 0 0 1 1 1 0 Putative amidoligase enzyme (DUF2126) PTS_EIIA_2 PF00359.22 NODE_39252_length_534_cov_3.326653_g31860_i0reverse_frame_1 - 3.7e-20 72.3 0.0 6.5e-20 71.5 0.0 1.4 1 1 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GntR PF00392.21 NODE_39252_length_534_cov_3.326653_g31860_i0forward_frame_1 - 0.0012 18.5 0.1 0.0023 17.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Kelch_3 PF13415.6 NODE_39250_length_534_cov_3.599198_g31858_i0reverse_frame_1 - 0.14 12.5 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Galactose oxidase, central domain SBP_bac_5 PF00496.22 NODE_39250_length_534_cov_3.599198_g31858_i0forward_frame_1 - 1.1e-42 146.4 0.1 1.2e-42 146.2 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Ank_4 PF13637.6 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.006 17.1 0.0 0.016 15.8 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.036 14.6 0.2 0.5 11.0 0.2 2.4 1 1 1 2 2 2 0 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.086 13.2 0.0 0.58 10.5 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Mrpl_C PF18502.1 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.15 12.3 3.3 0.062 13.6 0.7 1.7 2 0 0 2 2 2 0 54S ribosomal protein L8 C-terminal domain DUF5123 PF17161.4 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.28 12.3 6.9 1.6 9.9 5.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5123) Prok-RING_4 PF14447.6 NODE_39224_length_534_cov_213.845691_g31833_i0forward_frame_1 - 0.0082 16.0 0.6 0.019 14.8 0.6 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 DUF3981 PF13139.6 NODE_39211_length_534_cov_30844.591182_g30592_i6reverse_frame_1 - 0.0026 18.1 1.1 0.0026 18.1 1.1 1.6 1 1 0 2 2 2 1 Domain of unknown function (DUF3981) DOPA_dioxygen PF08883.11 NODE_39196_length_535_cov_3.418000_g31809_i0forward_frame_3 - 0.087 13.0 0.4 0.18 12.0 0.0 1.7 2 0 0 2 2 2 0 Dopa 4,5-dioxygenase family Peptidase_M14 PF00246.24 NODE_39193_length_535_cov_4.492000_g31806_i0forward_frame_2 - 2.2e-15 57.3 0.0 3.3e-15 56.7 0.0 1.3 1 0 0 1 1 1 1 Zinc carboxypeptidase Oxidored_q5_N PF01059.17 NODE_39192_length_535_cov_4.996000_g31805_i0forward_frame_3 - 1.3 9.1 0.0 1.3 9.1 0.0 3.0 2 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Wyosine_form PF08608.12 NODE_39190_length_535_cov_7.142000_g31803_i0reverse_frame_3 - 0.11 12.8 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 Wyosine base formation Orai-1 PF07856.12 NODE_39175_length_535_cov_94.002000_g31788_i0forward_frame_2 - 0.018 14.7 1.0 0.027 14.2 1.0 1.4 1 1 0 1 1 1 0 Mediator of CRAC channel activity DoxX_2 PF13564.6 NODE_39175_length_535_cov_94.002000_g31788_i0forward_frame_2 - 0.042 14.0 0.0 0.071 13.2 0.0 1.4 1 0 0 1 1 1 0 DoxX-like family Asp PF00026.23 NODE_39173_length_535_cov_106.266000_g31786_i0reverse_frame_2 - 7.7e-25 88.0 0.1 1.1e-24 87.4 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_39173_length_535_cov_106.266000_g31786_i0reverse_frame_2 - 4.6e-07 30.2 0.4 3.4e-06 27.4 0.2 2.1 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal gag-asp_proteas PF13975.6 NODE_39173_length_535_cov_106.266000_g31786_i0reverse_frame_2 - 0.014 15.9 0.0 0.027 15.0 0.0 1.4 1 0 0 1 1 1 0 gag-polyprotein putative aspartyl protease WD40_like PF17005.5 NODE_39165_length_535_cov_164.812000_g31779_i0reverse_frame_3 - 0.00049 19.5 6.7 0.1 11.9 0.1 2.0 1 1 1 2 2 2 2 WD40-like domain BBS2_Mid PF14783.6 NODE_39165_length_535_cov_164.812000_g31779_i0reverse_frame_3 - 0.0091 16.0 0.9 0.057 13.5 0.7 2.0 1 1 1 2 2 2 1 Ciliary BBSome complex subunit 2, middle region Vps16_N PF04841.13 NODE_39165_length_535_cov_164.812000_g31779_i0reverse_frame_3 - 0.021 13.6 0.2 0.023 13.4 0.2 1.1 1 0 0 1 1 1 0 Vps16, N-terminal region OrfA PF17495.2 NODE_39165_length_535_cov_164.812000_g31779_i0reverse_frame_3 - 0.067 13.4 0.2 0.11 12.6 0.2 1.4 1 0 0 1 1 1 0 Vpr-like OrfA Adipogenin PF15202.6 NODE_39162_length_535_cov_179.622000_g31776_i0reverse_frame_3 - 0.015 15.3 0.3 0.037 14.1 0.3 1.6 1 0 0 1 1 1 0 Adipogenin FNIP PF05725.12 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_3 - 2.3e-37 126.9 22.0 1e-12 48.0 0.5 2.9 1 1 3 4 4 4 4 FNIP Repeat LRR_5 PF13306.6 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_3 - 0.0009 19.2 0.1 0.0013 18.7 0.1 1.2 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) Glyco_hydro_65C PF03633.15 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_3 - 0.14 12.1 1.5 95 3.0 0.0 4.0 4 0 0 4 4 4 0 Glycosyl hydrolase family 65, C-terminal domain LRR_11 PF18831.1 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_3 - 4.4 7.0 13.1 30 4.3 0.1 4.3 4 0 0 4 4 4 0 Leucine-rich repeat HalX PF08663.10 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_3 - 0.047 14.0 4.1 1.2 9.5 0.3 2.6 2 1 0 2 2 2 0 HalX domain DUF1018 PF06252.12 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_3 - 0.077 14.0 0.4 0.12 13.4 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1018) TOH_N PF12549.8 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_2 - 0.073 12.9 0.5 4.7 7.2 0.0 3.2 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal HalX PF08663.10 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_2 - 0.23 11.8 7.2 5.1 7.5 0.1 3.2 4 0 0 4 4 4 0 HalX domain HCV_capsid PF01543.17 NODE_39141_length_536_cov_2.335329_g31756_i0reverse_frame_3 - 0.036 14.3 3.1 0.04 14.1 0.3 2.0 2 0 0 2 2 2 0 Hepatitis C virus capsid protein PTPRCAP PF15713.5 NODE_39140_length_536_cov_2.341317_g31755_i0reverse_frame_3 - 0.085 13.1 3.3 0.13 12.5 3.3 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated DUF5581 PF17744.1 NODE_39138_length_536_cov_2.616766_g31753_i0reverse_frame_3 - 0.07 12.5 0.0 0.086 12.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5581) Gemini_mov PF01708.16 NODE_39137_length_536_cov_2.668663_g31752_i0reverse_frame_3 - 0.54 10.1 2.3 1 9.1 2.3 1.5 1 0 0 1 1 1 0 Geminivirus putative movement protein PCO_ADO PF07847.12 NODE_39137_length_536_cov_2.668663_g31752_i0reverse_frame_2 - 0.00045 19.7 0.0 0.00054 19.5 0.0 1.2 1 0 0 1 1 1 1 PCO_ADO Lactate_perm PF02652.14 NODE_39129_length_536_cov_68.201597_g31745_i0reverse_frame_2 - 0.06 12.1 4.9 0.075 11.8 4.9 1.1 1 0 0 1 1 1 0 L-lactate permease Exonuc_VII_L PF02601.15 NODE_39127_length_536_cov_74.307385_g31743_i0reverse_frame_3 - 3.8 7.0 6.8 4.4 6.8 6.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit SAYSvFN PF10260.9 NODE_39105_length_536_cov_249.323353_g31721_i0forward_frame_3 - 5.4e-14 51.9 0.0 8.7e-14 51.2 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved domain (SAYSvFN) SEC-C PF02810.15 NODE_39105_length_536_cov_249.323353_g31721_i0forward_frame_3 - 2.5e-06 27.3 7.9 4e-06 26.6 7.9 1.4 1 0 0 1 1 1 1 SEC-C motif YabA PF06156.13 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.0062 17.1 2.8 0.011 16.4 2.7 1.5 1 1 0 1 1 1 1 Initiation control protein YabA MIB_HERC2 PF06701.13 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.009 16.2 0.8 0.017 15.3 0.8 1.5 1 0 0 1 1 1 1 Mib_herc2 RNA_pol_Rpa2_4 PF06883.12 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.009 16.0 0.0 0.025 14.6 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase I, Rpa2 specific domain Plexin_cytopl PF08337.12 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.064 11.9 0.3 0.075 11.7 0.3 1.0 1 0 0 1 1 1 0 Plexin cytoplasmic RasGAP domain DUF3452 PF11934.8 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.073 12.6 0.4 0.11 12.1 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) Ax_dynein_light PF10211.9 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.15 12.0 6.0 0.2 11.6 6.0 1.3 1 0 0 1 1 1 0 Axonemal dynein light chain DivIC PF04977.15 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.49 10.2 5.6 0.61 9.9 4.5 1.8 1 1 1 2 2 2 0 Septum formation initiator YMF19 PF02326.15 NODE_39100_length_536_cov_380.682635_g31716_i0reverse_frame_3 - 0.35 11.7 2.7 0.53 11.1 2.7 1.5 1 1 0 1 1 1 0 Plant ATP synthase F0 wnt PF00110.19 NODE_39100_length_536_cov_380.682635_g31716_i0reverse_frame_3 - 0.96 9.0 8.3 1.1 8.8 8.3 1.4 1 1 0 1 1 1 0 wnt family DUF2946 PF11162.8 NODE_39100_length_536_cov_380.682635_g31716_i0reverse_frame_2 - 0.048 14.3 1.5 0.12 13.0 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2946) SR-25 PF10500.9 NODE_39100_length_536_cov_380.682635_g31716_i0forward_frame_3 - 0.0097 15.5 5.0 0.013 15.1 5.0 1.3 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein UAA PF08449.11 NODE_39100_length_536_cov_380.682635_g31716_i0forward_frame_2 - 8.4e-17 61.3 2.0 1e-16 61.0 2.0 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 NODE_39100_length_536_cov_380.682635_g31716_i0forward_frame_2 - 0.0088 16.2 3.0 0.015 15.5 2.8 1.6 1 1 0 1 1 1 1 EamA-like transporter family zf-C2H2 PF00096.26 NODE_39088_length_537_cov_1.920319_g31706_i0reverse_frame_3 - 0.031 14.7 0.2 0.031 14.7 0.2 2.1 2 0 0 2 2 2 0 Zinc finger, C2H2 type DUF3091 PF11291.8 NODE_39087_length_537_cov_2.105578_g31705_i0reverse_frame_3 - 0.15 12.3 0.1 0.23 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) MFS_1 PF07690.16 NODE_39087_length_537_cov_2.105578_g31705_i0reverse_frame_2 - 0.0089 15.0 0.1 0.0092 14.9 0.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily ABC_tran PF00005.27 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 1.3e-18 67.8 2.3 1.7e-09 38.3 0.0 2.4 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 2.5e-05 24.7 0.1 4e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 0.0005 19.6 1.5 0.0041 16.6 0.1 2.0 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 0.0011 18.9 4.0 0.002 18.0 0.2 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 0.025 14.3 0.3 0.062 13.0 0.3 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 1.8 8.8 4.2 6.2 7.1 0.9 2.2 2 0 0 2 2 2 0 AAA domain Ribosomal_S14 PF00253.21 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_2 - 0.016 14.9 0.6 0.054 13.3 0.6 1.9 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e Speriolin_N PF15058.6 NODE_39083_length_537_cov_3.569721_g31701_i0forward_frame_3 - 0.059 13.5 1.4 0.07 13.2 1.3 1.3 1 1 0 1 1 1 0 Speriolin N terminus Ribosomal_S14 PF00253.21 NODE_39083_length_537_cov_3.569721_g31701_i0forward_frame_3 - 0.098 12.4 0.2 0.21 11.4 0.2 1.5 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e Molydop_binding PF01568.21 NODE_39082_length_537_cov_3.621514_g31700_i0forward_frame_2 - 7e-18 64.7 0.1 2.9e-17 62.7 0.0 2.0 2 1 0 2 2 2 1 Molydopterin dinucleotide binding domain Glyco_hydro_10 PF00331.20 NODE_39082_length_537_cov_3.621514_g31700_i0forward_frame_2 - 0.14 11.3 0.0 0.19 10.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 10 Arm_vescicular PF18770.1 NODE_39077_length_537_cov_6.834661_g31696_i0reverse_frame_2 - 0.1 12.5 0.2 0.4 10.7 0.0 2.0 2 0 0 2 2 2 0 Armadillo tether-repeat of vescicular transport factor MAR_sialic_bdg PF10564.9 NODE_39069_length_537_cov_80.619522_g31688_i0reverse_frame_3 - 0.16 12.0 1.8 0.27 11.3 0.6 2.0 1 1 1 2 2 2 0 Sialic-acid binding micronemal adhesive repeat UPF0730 PF15827.5 NODE_39050_length_537_cov_257.844622_g31670_i0reverse_frame_3 - 0.022 14.5 0.9 0.049 13.4 0.9 1.5 1 0 0 1 1 1 0 UPF0730 unknown protein family TFIIS_C PF01096.18 NODE_39050_length_537_cov_257.844622_g31670_i0forward_frame_3 - 0.15 11.9 3.3 0.7 9.8 0.5 2.8 2 1 0 2 2 2 0 Transcription factor S-II (TFIIS) IMCp PF12314.8 NODE_39040_length_537_cov_545.639442_g31661_i0reverse_frame_2 - 4e-05 23.8 22.2 0.0065 16.7 1.9 2.6 1 1 1 2 2 2 2 Inner membrane complex protein DUF2706 PF10913.8 NODE_39038_length_537_cov_1442.147410_g31659_i0reverse_frame_3 - 0.083 12.7 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2706) DUF4407 PF14362.6 ORF99774 - 2.5 7.4 8.5 5 6.4 8.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Aminotran_4 PF01063.19 ORF99614 - 3.1e-12 46.8 0.0 3.6e-12 46.6 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV ZapB PF06005.12 ORF98506 - 0.044 14.2 1.4 0.044 14.2 1.4 2.4 2 1 0 2 2 2 0 Cell division protein ZapB CASP_C PF08172.12 ORF98506 - 0.056 12.8 1.8 0.052 12.9 1.1 1.4 1 1 0 1 1 1 0 CASP C terminal PKcGMP_CC PF16808.5 ORF98506 - 0.3 11.0 2.8 0.69 9.8 2.8 1.6 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase UIM PF02809.20 ORF98506 - 0.5 10.4 5.6 0.38 10.8 2.2 2.3 2 0 0 2 2 2 0 Ubiquitin interaction motif YscO-like PF16789.5 ORF98158 - 0.016 15.3 0.7 0.022 14.8 0.7 1.2 1 0 0 1 1 1 0 YscO-like protein RNA_pol PF00940.19 ORF98158 - 0.031 13.1 0.0 0.038 12.8 0.0 1.1 1 0 0 1 1 1 0 DNA-dependent RNA polymerase CLAMP PF14769.6 ORF97736 - 0.0093 16.4 1.2 0.018 15.5 0.9 1.6 2 1 0 2 2 2 1 Flagellar C1a complex subunit C1a-32 Herpes_UL52 PF03121.15 ORF97736 - 0.12 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase DHHC PF01529.20 ORF9730 - 7.1e-15 55.3 3.1 9.3e-15 54.9 3.1 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase ADH_N PF08240.12 ORF9730 - 0.8 9.6 5.1 1.6 8.6 5.1 1.6 1 1 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain Choline_transpo PF04515.12 ORF96983 - 3.7e-32 111.8 18.5 4.1e-32 111.7 18.5 1.0 1 0 0 1 1 1 1 Plasma-membrane choline transporter TM_helix PF05552.12 ORF96983 - 0.11 12.5 7.8 0.079 13.0 2.0 2.4 2 0 0 2 2 2 0 Conserved TM helix Glycophorin_A PF01102.18 ORF96983 - 0.33 11.2 3.9 0.12 12.6 1.2 1.7 1 1 1 2 2 2 0 Glycophorin A DUF2207 PF09972.9 ORF96983 - 4.4 5.9 6.5 4.4 6.0 6.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2530 PF10745.9 ORF96983 - 9.6 6.5 8.9 1.8 8.9 0.2 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2530) Pro_isomerase PF00160.21 ORF96812 - 1.2e-47 162.1 0.0 1.4e-47 161.9 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TetR_N PF00440.23 ORF94656 - 9.7e-09 34.9 0.1 1.5e-08 34.2 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 ORF94656 - 1.9e-08 34.4 0.0 3.1e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_6 PF13977.6 ORF94656 - 5.4e-05 23.4 0.1 0.00044 20.5 0.1 2.2 1 1 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_C_28 PF17937.1 ORF94656 - 0.0075 16.7 0.4 0.018 15.5 0.4 1.7 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_11 PF16859.5 ORF94656 - 0.024 14.9 0.2 0.29 11.5 0.1 2.4 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain T2SSM PF04612.12 ORF9011 - 2e-41 141.7 2.2 2.4e-41 141.5 2.2 1.1 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein M TetR_C_11 PF16859.5 ORF9011 - 0.098 13.0 0.4 0.27 11.5 0.3 1.8 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Mce4_CUP1 PF11887.8 ORF9011 - 0.14 11.6 0.1 0.19 11.2 0.1 1.2 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative GPR15L PF15854.5 ORF8807 - 1.9 8.8 0.0 1.9 8.8 0.0 3.1 4 0 0 4 4 4 0 G-protein coupled receptor ligand 15 DUF4363 PF14276.6 ORF87153 - 0.023 14.8 2.2 0.038 14.1 2.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4363) Choline_kinase PF01633.20 ORF84210 - 0.01 15.4 0.4 0.015 14.9 0.2 1.3 1 1 0 1 1 1 0 Choline/ethanolamine kinase OAD_gamma PF04277.13 ORF84210 - 0.8 10.3 3.8 1.8 9.2 3.8 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain LolA_like PF17131.4 ORF8419 - 0.045 13.5 0.1 0.063 13.0 0.1 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein-sorting protein MORN PF02493.20 ORF82188 - 1.8e-14 52.6 24.6 5.9e-06 25.9 2.0 5.4 5 0 0 5 5 5 4 MORN repeat AKAP7_NLS PF10469.9 ORF82188 - 0.0079 16.1 0.4 0.01 15.7 0.4 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain Trypan_PARP PF05887.11 ORF81545 - 0.037 14.0 1.7 0.055 13.4 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Phi-29_GP16_7 PF06720.11 ORF81545 - 0.45 10.4 7.8 0.19 11.6 2.9 2.0 1 1 1 2 2 2 0 Bacteriophage phi-29 early protein GP16.7 Prismane PF03063.20 ORF81545 - 1 8.0 4.1 1.3 7.7 4.1 1.0 1 0 0 1 1 1 0 Prismane/CO dehydrogenase family Uds1 PF15456.6 ORF81545 - 1.9 8.7 9.6 12 6.0 6.2 2.2 1 1 1 2 2 2 0 Up-regulated During Septation GPR15L PF15854.5 ORF80846 - 1.9 8.8 0.0 1.9 8.8 0.0 3.1 4 0 0 4 4 4 0 G-protein coupled receptor ligand 15 TPR_MLP1_2 PF07926.12 ORF80710 - 0.053 13.6 12.3 0.087 12.9 10.3 2.1 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein Methyltransf_11 PF08241.12 ORF78807 - 0.012 16.2 0.0 0.021 15.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 ORF78807 - 0.069 13.9 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ribosomal_L18 PF17135.4 ORF78699 - 1.3e-67 226.8 0.5 1.5e-67 226.6 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 ORF78699 - 0.01 16.5 0.2 0.014 16.1 0.2 1.4 1 1 0 1 1 1 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Glyco_transf_18 PF15024.6 ORF78699 - 0.14 10.7 0.1 0.18 10.4 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Lipocalin_2 PF08212.12 ORF77352 - 1.6e-45 154.6 0.0 1.9e-45 154.4 0.0 1.0 1 0 0 1 1 1 1 Lipocalin-like domain Lipocalin PF00061.23 ORF77352 - 6.2e-09 36.2 0.0 8.3e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 Lipocalin / cytosolic fatty-acid binding protein family VDE PF07137.11 ORF77352 - 0.02 14.4 0.0 5.5 6.4 0.0 2.1 2 0 0 2 2 2 0 VDE lipocalin domain TauE PF01925.19 ORF74902 - 1.6e-09 37.8 6.2 2.3e-09 37.3 6.2 1.2 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE GCP_C_terminal PF04130.13 ORF74072 - 3.4e-05 23.5 0.1 5.4e-05 22.8 0.1 1.4 1 1 0 1 1 1 1 Gamma tubulin complex component C-terminal DUF2240 PF09999.9 ORF74072 - 0.019 14.6 0.3 0.033 13.8 0.3 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) NOZZLE PF08744.10 ORF7338 - 0.1 12.1 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Plant transcription factor NOZZLE DUF447 PF04289.12 ORF72168 - 0.027 14.2 0.1 0.12 12.1 0.0 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF447) TPK_catalytic PF04263.16 ORF72168 - 0.053 13.6 1.7 0.061 13.4 1.7 1.3 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain Zn_Tnp_IS1 PF03811.13 ORF71788 - 0.78 9.5 5.2 28 4.5 0.0 3.3 3 0 0 3 3 3 0 InsA N-terminal domain MFS_1 PF07690.16 ORF71179 - 0.00045 19.2 8.4 0.00054 19.0 8.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF71179 - 0.0089 14.6 5.0 0.038 12.5 4.9 1.8 1 1 0 1 1 1 1 MFS/sugar transport protein Nepo_coat_C PF03688.14 ORF71179 - 0.085 12.7 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Nepovirus coat protein, C-terminal domain ILEI PF15711.5 ORF71018 - 0.096 13.2 0.4 0.18 12.3 0.4 1.4 1 0 0 1 1 1 0 Interleukin-like EMT inducer TubC_N PF18563.1 ORF70687 - 0.03 14.3 0.3 0.19 11.7 0.0 2.5 4 0 0 4 4 4 0 TubC N-terminal docking domain KH_dom-like PF14714.6 ORF68618 - 0.039 14.3 0.1 0.064 13.6 0.1 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IMUP PF15761.5 ORF68618 - 3.4 8.4 8.3 5.5 7.7 8.3 1.3 1 0 0 1 1 1 0 Immortalisation up-regulated protein TPR_7 PF13176.6 ORF68540 - 4.9e-05 23.1 0.1 1.3 9.2 0.1 3.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF68540 - 7.1e-05 23.0 0.3 0.044 14.1 0.4 2.9 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF68540 - 0.0015 18.6 0.6 2.9 8.3 0.1 3.7 3 1 2 5 5 5 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF68540 - 0.017 15.7 0.0 11 6.9 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF68540 - 0.043 13.9 0.2 1.5 8.9 0.1 2.2 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 5 TPR_14 PF13428.6 ORF68540 - 0.073 13.9 0.0 8.9 7.4 0.1 2.9 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF68540 - 0.15 12.2 2.4 33 4.9 0.0 3.8 3 1 2 5 5 5 0 Tetratricopeptide repeat REV1_C PF16727.5 ORF68540 - 0.18 12.2 0.0 0.29 11.6 0.0 1.5 1 0 0 1 1 1 0 DNA repair protein REV1 C-terminal domain TPR_1 PF00515.28 ORF68540 - 0.25 11.2 3.3 15 5.6 0.0 3.7 3 1 2 5 5 5 0 Tetratricopeptide repeat RAMP4 PF06624.12 ORF68333 - 0.24 11.5 1.7 0.43 10.7 1.7 1.4 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Occludin_ELL PF07303.13 ORF68261 - 1.2 9.9 10.3 0.29 11.9 1.1 2.9 1 1 1 2 2 2 0 Occludin homology domain DUF948 PF06103.11 ORF68261 - 1.2 9.4 11.9 7.4 6.9 4.2 2.9 2 2 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF2120 PF09893.9 ORF68261 - 3.2 7.8 18.8 0.44 10.7 6.0 2.5 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) DUF1664 PF07889.12 ORF68261 - 3.8 7.6 14.5 2.2 8.4 1.8 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Mt_ATP-synt_D PF05873.12 ORF68261 - 4.9 7.0 12.1 6 6.7 1.7 2.6 1 1 0 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) UPF0242 PF06785.11 ORF68261 - 6.6 6.8 23.5 0.46 10.6 11.8 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus FliD_N PF02465.18 ORF68261 - 7.3 7.4 9.4 7.5 7.3 0.5 2.7 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Tetraspanin PF00335.20 ORF66943 - 4.4e-05 23.3 7.8 6.1e-05 22.8 7.8 1.2 1 0 0 1 1 1 1 Tetraspanin family Phage_holin_3_6 PF07332.11 ORF66943 - 0.062 13.3 0.6 0.062 13.3 0.6 2.2 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4231 PF14015.6 ORF66943 - 5.1 7.6 9.7 0.31 11.5 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) Sugar_tr PF00083.24 ORF6684 - 1.5e-18 66.9 16.1 1.9e-18 66.6 16.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter OmpA_like PF16961.5 ORF6684 - 0.074 12.7 0.4 0.1 12.2 0.4 1.2 1 0 0 1 1 1 0 Putative OmpA-OmpF-like porin family DUF2070 PF09843.9 ORF6684 - 3.4 5.8 7.3 4.1 5.6 7.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FixQ PF05545.11 ORF6684 - 8.8 6.4 7.9 17 5.5 0.3 2.6 2 1 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ Fib_alpha PF08702.10 ORF6432 - 0.011 16.0 9.5 0.011 16.0 9.5 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family FPP PF05911.11 ORF6432 - 0.023 12.9 33.0 0.026 12.7 33.0 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil Fez1 PF06818.15 ORF6432 - 0.039 14.4 27.2 0.055 13.9 27.2 1.1 1 0 0 1 1 1 0 Fez1 Lant_dehydr_C PF14028.6 ORF6432 - 0.074 12.6 2.3 0.11 12.0 2.3 1.4 1 1 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term HOOK PF05622.12 ORF6432 - 0.18 9.9 32.4 0.22 9.6 32.4 1.0 1 0 0 1 1 1 0 HOOK protein Exonuc_VII_L PF02601.15 ORF6432 - 0.55 9.7 20.6 0.65 9.5 20.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit CALCOCO1 PF07888.11 ORF6432 - 1 8.2 28.3 1.2 8.0 28.3 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like DUF4279 PF14106.6 ORF6432 - 1.4 9.1 7.1 0.46 10.7 1.7 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4279) TraG_N PF07916.11 ORF6432 - 2 7.1 4.7 2.2 7.0 4.7 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region Phage_HK97_TLTM PF06120.11 ORF6432 - 3.5 6.7 26.3 3.9 6.6 26.3 1.1 1 0 0 1 1 1 0 Tail length tape measure protein SlyX PF04102.12 ORF6432 - 4 8.1 18.9 0.72 10.5 3.8 3.5 1 1 3 4 4 4 0 SlyX Atg14 PF10186.9 ORF6432 - 4 6.4 31.5 13 4.7 31.5 1.7 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF6432 - 4.4 6.1 36.8 62 2.3 36.3 2.0 1 1 0 1 1 1 0 Spc7 kinetochore protein LPP PF04728.13 ORF6432 - 5.6 7.4 18.2 2.3 8.7 1.9 3.6 3 1 1 4 4 4 0 Lipoprotein leucine-zipper DUF668 PF05003.12 ORF6432 - 6.6 7.3 9.9 1.8 9.1 1.0 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF668) Prominin PF05478.11 ORF6432 - 6.8 4.5 25.4 0.044 11.8 9.4 2.0 1 1 1 2 2 2 0 Prominin Laminin_II PF06009.12 ORF6432 - 7.8 6.5 23.2 12 5.9 21.0 2.3 1 1 1 2 2 2 0 Laminin Domain II DASH_Spc19 PF08287.11 ORF6432 - 8.7 6.2 28.7 4.6e+02 0.6 28.6 2.1 1 1 0 1 1 1 0 Spc19 GYF PF02213.16 ORF63218 - 6.5e-13 48.1 0.1 1.2e-12 47.3 0.1 1.5 1 0 0 1 1 1 1 GYF domain GYF_2 PF14237.6 ORF63218 - 0.00036 20.3 0.1 0.00063 19.5 0.1 1.4 1 0 0 1 1 1 1 GYF domain 2 HAP1_N PF04849.13 ORF62339 - 0.0017 17.7 2.0 0.0017 17.7 2.0 2.0 2 0 0 2 2 2 1 HAP1 N-terminal conserved region APG6_N PF17675.1 ORF62339 - 0.081 13.5 10.9 0.032 14.8 4.5 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region Fungal_TACC PF12709.7 ORF62339 - 0.093 13.2 1.0 0.093 13.2 1.0 3.0 2 1 1 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF1204 PF06721.11 ORF62339 - 0.15 11.4 5.3 0.083 12.3 3.4 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1204) GED PF02212.18 ORF62339 - 0.38 10.9 8.3 2.8 8.2 0.6 3.0 3 0 0 3 3 3 0 Dynamin GTPase effector domain DUF1664 PF07889.12 ORF62339 - 0.58 10.2 9.3 0.13 12.3 0.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) DUF4201 PF13870.6 ORF62339 - 1.1 8.9 21.1 0.21 11.3 10.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) YabA PF06156.13 ORF62339 - 5 7.8 10.5 13 6.5 3.7 2.8 2 1 0 2 2 2 0 Initiation control protein YabA bZIP_1 PF00170.21 ORF62339 - 8 6.6 14.6 1.8 8.7 0.6 3.3 2 1 1 3 3 3 0 bZIP transcription factor Methyltransf_16 PF10294.9 ORF62148 - 9.2e-06 25.5 0.2 1.3e-05 25.0 0.2 1.2 1 0 0 1 1 1 1 Lysine methyltransferase TehB PF03848.14 ORF62148 - 0.00047 19.6 0.4 0.00079 18.9 0.4 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 ORF62148 - 0.0068 16.0 0.1 0.012 15.2 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_20 PF12147.8 ORF62148 - 0.028 13.6 0.0 0.033 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_23 PF13489.6 ORF62148 - 0.046 13.6 0.0 0.068 13.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 ORF62148 - 0.057 14.1 0.0 0.12 13.1 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.6 ORF62148 - 0.11 12.5 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain THEG PF14912.6 ORF61352 - 0.01 16.2 0.1 0.027 14.9 0.1 1.8 1 0 0 1 1 1 0 Testicular haploid expressed repeat Peptidase_M20 PF01546.28 ORF6088 - 1.6e-07 31.2 0.0 2.8e-07 30.4 0.0 1.5 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF6088 - 0.00011 22.1 0.0 0.0002 21.2 0.0 1.5 2 0 0 2 2 2 1 Peptidase dimerisation domain Alba PF01918.21 ORF6088 - 0.051 13.4 0.0 0.065 13.1 0.0 1.4 1 1 0 1 1 1 0 Alba Pkinase PF00069.25 ORF60818 - 3e-18 66.1 0.0 4.9e-18 65.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60818 - 4.9e-13 49.0 0.0 7.1e-13 48.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF60818 - 0.11 11.8 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 Kinase-like Ank PF00023.30 ORF60464 - 5.7e-15 55.0 0.2 1.5e-07 31.5 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF60464 - 1.9e-11 44.4 0.1 2.9e-11 43.8 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF60464 - 1.3e-10 41.5 0.0 2.6e-10 40.6 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF60464 - 3e-09 36.4 0.0 0.00078 19.7 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF60464 - 1.5e-08 34.7 0.2 6.7e-08 32.6 0.1 2.0 2 0 0 2 2 2 1 Ankyrin repeats (many copies) SSB PF00436.25 ORF59881 - 1.1e-42 144.3 0.7 1.3e-42 144.0 0.7 1.1 1 0 0 1 1 1 1 Single-strand binding protein family PSI_8 PF00796.18 ORF58685 - 1.5e-05 24.7 6.5 1.5e-05 24.7 6.5 2.5 3 0 0 3 3 3 1 Photosystem I reaction centre subunit VIII CCDC32 PF14989.6 ORF58685 - 0.11 12.5 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing 32 LMBR1 PF04791.16 ORF58121 - 7.2e-07 28.5 0.0 7.2e-07 28.5 0.0 1.1 1 0 0 1 1 1 1 LMBR1-like membrane protein BLACT_WH PF17778.1 ORF58121 - 0.22 11.6 0.5 0.37 10.8 0.5 1.4 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain Neocarzinostat PF00960.18 ORF56916 - 0.094 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Neocarzinostatin family LMBR1 PF04791.16 ORF56535 - 8.3e-07 28.3 0.0 8.3e-07 28.3 0.0 1.1 1 0 0 1 1 1 1 LMBR1-like membrane protein SHOCT PF09851.9 ORF56535 - 0.13 12.1 0.1 0.23 11.3 0.1 1.5 1 0 0 1 1 1 0 Short C-terminal domain DUF5381 PF17353.2 ORF56535 - 0.53 10.0 6.7 2.5 7.9 1.7 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5381) DUF4407 PF14362.6 ORF53782 - 2.5 7.4 8.5 5 6.4 8.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TetR_C_1 PF02909.17 ORF53215 - 0.013 15.4 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF4407 PF14362.6 ORF53152 - 2.5 7.4 8.5 5 6.4 8.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TMC PF07810.13 ORF52770 - 2.4e-10 41.0 5.2 4.4e-10 40.1 5.2 1.4 1 0 0 1 1 1 1 TMC domain CPBP PF02517.16 ORF52770 - 9.5 6.7 8.2 28 5.1 8.2 2.0 1 1 0 1 1 1 0 CPBP intramembrane metalloprotease RCC1 PF00415.18 ORF51605 - 3.4e-07 30.8 0.0 0.00034 21.2 0.1 3.8 3 1 0 3 3 3 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF51605 - 0.047 13.5 1.4 0.19 11.6 0.0 2.5 4 0 0 4 4 4 0 Regulator of chromosome condensation (RCC1) repeat Tnp_zf-ribbon_2 PF13842.6 ORF50621 - 0.031 15.1 0.9 0.059 14.2 0.9 1.6 1 0 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon LSM PF01423.22 ORF50305 - 0.031 14.0 0.8 0.3 10.8 0.2 2.5 2 0 0 2 2 2 0 LSM domain cNMP_binding PF00027.29 ORF5016 - 6.3e-07 29.4 0.0 0.0063 16.6 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain CDP-OH_P_transf PF01066.21 ORF49788 - 7.6e-13 49.0 2.8 1.3e-12 48.3 0.4 2.1 2 0 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF5325 PF17259.2 ORF49788 - 0.085 12.8 1.1 0.2 11.5 1.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5325) DUF2207 PF09972.9 ORF49788 - 0.11 11.3 1.4 0.13 11.0 1.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Acetyltransf_3 PF13302.7 ORF49015 - 6.9e-17 62.4 0.0 8.4e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF49015 - 4.5e-06 26.5 0.0 7e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.6 ORF49015 - 3.7e-05 23.4 0.0 5.1e-05 23.0 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF49015 - 5.9e-05 23.3 0.0 7.6e-05 22.9 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family GNAT_acetyltran PF12746.7 ORF49015 - 0.00012 21.8 0.0 0.00016 21.3 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_4 PF13420.7 ORF49015 - 0.001 19.3 0.0 0.0014 18.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DrsE_2 PF13686.6 ORF49015 - 0.0027 17.6 0.0 0.0037 17.2 0.0 1.2 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family Acetyltransf_10 PF13673.7 ORF49015 - 0.01 15.8 0.1 0.015 15.2 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Ank_2 PF12796.7 ORF47720 - 1.3e-31 109.0 0.9 4.6e-14 52.8 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF47720 - 3.6e-30 103.6 3.1 1.4e-10 41.2 0.2 4.2 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF47720 - 3.1e-25 88.2 0.2 2.7e-10 40.6 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF47720 - 7.3e-25 86.3 0.3 0.00029 21.2 0.0 5.2 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF47720 - 4.3e-24 82.0 0.1 0.00036 20.8 0.0 5.1 5 0 0 5 5 5 4 Ankyrin repeat EF-hand_1 PF00036.32 ORF46272 - 3.5e-16 57.5 8.2 1.2e-06 27.6 0.7 3.3 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF46272 - 3.1e-13 48.5 6.8 0.00012 21.7 0.3 3.6 3 0 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF46272 - 3.8e-13 49.7 8.4 3.4e-07 30.6 1.7 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF46272 - 4.7e-12 44.8 9.4 4.1e-05 22.9 0.6 3.4 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF46272 - 8.6e-10 38.3 7.5 0.00042 20.1 0.7 3.7 3 1 1 4 4 4 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF46272 - 0.00019 21.7 0.7 0.049 13.9 0.0 2.3 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF46272 - 0.0043 17.0 0.3 0.19 11.7 0.3 2.3 1 1 0 1 1 1 1 Caleosin related protein EF-hand_4 PF12763.7 ORF46272 - 0.011 15.7 5.6 1.2 9.1 0.7 3.0 1 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand TRAM_LAG1_CLN8 PF03798.16 ORF45253 - 1.9e-09 37.5 16.4 2.7e-09 37.1 16.4 1.3 1 1 0 1 1 1 1 TLC domain RTC4 PF14474.6 ORF45253 - 0.066 13.4 0.3 1 9.6 0.0 2.2 2 0 0 2 2 2 0 RTC4-like domain DHHC PF01529.20 ORF4443 - 3.6 7.7 5.9 5.3 7.1 5.9 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase AAA_18 PF13238.6 ORF43443 - 3.1e-25 89.2 0.0 5.1e-25 88.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 ORF43443 - 2.8e-05 24.6 0.0 0.0001 22.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF43443 - 5.2e-05 23.7 0.0 6.9e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain ADK PF00406.22 ORF43443 - 0.00022 21.3 0.7 0.39 10.8 0.0 2.3 1 1 1 2 2 2 2 Adenylate kinase AAA_22 PF13401.6 ORF43443 - 0.00029 21.1 0.0 0.00051 20.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF43443 - 0.00062 19.8 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 ORF43443 - 0.00098 19.1 1.6 0.0017 18.3 0.2 2.0 2 1 0 3 3 3 1 NTPase AAA_28 PF13521.6 ORF43443 - 0.0011 19.3 0.1 0.0044 17.3 0.0 2.0 1 1 0 2 2 2 1 AAA domain AAA PF00004.29 ORF43443 - 0.002 18.6 0.0 0.0052 17.2 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 ORF43443 - 0.003 17.3 0.7 0.76 9.4 0.0 2.2 2 0 0 2 2 2 1 Thymidylate kinase KTI12 PF08433.10 ORF43443 - 0.0084 15.6 0.0 0.013 14.9 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_19 PF13245.6 ORF43443 - 0.018 15.4 0.1 0.035 14.4 0.1 1.4 1 1 0 1 1 1 0 AAA domain PRK PF00485.18 ORF43443 - 0.02 14.7 0.0 0.74 9.5 0.0 2.2 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 ORF43443 - 0.022 14.7 0.0 0.073 13.0 0.0 1.7 2 0 0 2 2 2 0 Adenylylsulphate kinase RNA_helicase PF00910.22 ORF43443 - 0.026 14.9 0.1 0.072 13.5 0.0 1.8 2 0 0 2 2 2 0 RNA helicase ATP_bind_1 PF03029.17 ORF43443 - 0.034 13.9 0.1 0.067 13.0 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein dNK PF01712.19 ORF43443 - 0.036 13.9 6.8 1.2 8.9 1.4 2.6 1 1 0 2 2 2 0 Deoxynucleoside kinase AAA_24 PF13479.6 ORF43443 - 0.041 13.6 0.2 0.069 12.9 0.2 1.6 1 1 0 1 1 1 0 AAA domain RuvB_N PF05496.12 ORF43443 - 0.047 13.4 0.0 0.078 12.7 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Mur_ligase_M PF08245.12 ORF43443 - 0.05 13.6 0.2 0.35 10.8 0.0 2.1 2 1 0 2 2 2 0 Mur ligase middle domain MeaB PF03308.16 ORF43443 - 0.058 12.4 0.3 0.2 10.6 0.1 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 ORF43443 - 0.078 13.0 0.4 0.4 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF43443 - 0.093 12.0 0.2 0.41 9.9 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 ORF43443 - 0.094 12.9 0.0 0.73 10.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 ORF43443 - 0.098 12.0 0.5 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_30 PF13604.6 ORF43443 - 0.11 12.2 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain ubiquitin PF00240.23 ORF4172 - 3.6e-16 58.7 0.3 3.6e-15 55.5 0.2 2.1 2 0 0 2 2 2 1 Ubiquitin family Ribosomal_S27 PF01599.19 ORF4172 - 5.5e-15 55.3 1.3 1.1e-14 54.3 0.5 2.0 1 1 1 2 2 2 1 Ribosomal protein S27a Rad60-SLD PF11976.8 ORF4172 - 5.7e-10 38.9 1.3 4.9e-09 35.9 1.1 2.3 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Sde2_N_Ubi PF13019.6 ORF4172 - 0.14 12.0 0.8 0.2 11.5 0.1 1.6 2 0 0 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain EAL PF00563.20 ORF40908 - 4.1e-38 131.2 0.0 4.6e-38 131.1 0.0 1.0 1 0 0 1 1 1 1 EAL domain Hom_end PF05204.14 ORF40908 - 0.058 13.6 0.0 0.089 13.0 0.0 1.2 1 0 0 1 1 1 0 Homing endonuclease Erythro-docking PF09277.11 ORF40892 - 0.077 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 Erythronolide synthase, docking AAA_18 PF13238.6 ORF39798 - 3.1e-25 89.2 0.0 5.1e-25 88.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 ORF39798 - 2.8e-05 24.6 0.0 0.0001 22.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF39798 - 5.2e-05 23.7 0.0 6.9e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain ADK PF00406.22 ORF39798 - 0.00022 21.3 0.7 0.39 10.8 0.0 2.3 1 1 1 2 2 2 2 Adenylate kinase AAA_22 PF13401.6 ORF39798 - 0.00029 21.1 0.0 0.00051 20.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF39798 - 0.00062 19.8 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 ORF39798 - 0.00098 19.1 1.6 0.0017 18.3 0.2 2.0 2 1 0 3 3 3 1 NTPase AAA_28 PF13521.6 ORF39798 - 0.0011 19.3 0.1 0.0044 17.3 0.0 2.0 1 1 0 2 2 2 1 AAA domain AAA PF00004.29 ORF39798 - 0.002 18.6 0.0 0.0052 17.2 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 ORF39798 - 0.003 17.3 0.7 0.76 9.4 0.0 2.2 2 0 0 2 2 2 1 Thymidylate kinase KTI12 PF08433.10 ORF39798 - 0.0084 15.6 0.0 0.013 14.9 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_19 PF13245.6 ORF39798 - 0.018 15.4 0.1 0.035 14.4 0.1 1.4 1 1 0 1 1 1 0 AAA domain PRK PF00485.18 ORF39798 - 0.02 14.7 0.0 0.74 9.5 0.0 2.2 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 ORF39798 - 0.022 14.7 0.0 0.073 13.0 0.0 1.7 2 0 0 2 2 2 0 Adenylylsulphate kinase RNA_helicase PF00910.22 ORF39798 - 0.026 14.9 0.1 0.072 13.5 0.0 1.8 2 0 0 2 2 2 0 RNA helicase ATP_bind_1 PF03029.17 ORF39798 - 0.034 13.9 0.1 0.067 13.0 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein dNK PF01712.19 ORF39798 - 0.036 13.9 6.8 1.2 8.9 1.4 2.6 1 1 0 2 2 2 0 Deoxynucleoside kinase AAA_24 PF13479.6 ORF39798 - 0.041 13.6 0.2 0.069 12.9 0.2 1.6 1 1 0 1 1 1 0 AAA domain RuvB_N PF05496.12 ORF39798 - 0.047 13.4 0.0 0.078 12.7 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Mur_ligase_M PF08245.12 ORF39798 - 0.05 13.6 0.2 0.35 10.8 0.0 2.1 2 1 0 2 2 2 0 Mur ligase middle domain MeaB PF03308.16 ORF39798 - 0.058 12.4 0.3 0.2 10.6 0.1 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 ORF39798 - 0.078 13.0 0.4 0.4 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF39798 - 0.093 12.0 0.2 0.41 9.9 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 ORF39798 - 0.094 12.9 0.0 0.73 10.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 ORF39798 - 0.098 12.0 0.5 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_30 PF13604.6 ORF39798 - 0.11 12.2 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain DSPc PF00782.20 ORF37907 - 0.083 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain Snf7 PF03357.21 ORF37182 - 0.0048 16.5 6.4 0.0048 16.5 6.4 1.9 2 0 0 2 2 2 1 Snf7 ALMT PF11744.8 ORF37182 - 5.2 5.8 7.2 6.8 5.4 7.2 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF4187 PF13821.6 ORF3660 - 1.9e-16 59.6 1.6 3.8e-16 58.6 1.6 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4187) Complex1_49kDa PF00346.19 ORF35525 - 0.018 14.2 0.0 0.026 13.6 0.0 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DUF4692 PF15763.5 ORF34709 - 0.0085 16.6 4.1 0.0092 16.5 0.7 2.1 1 1 1 2 2 2 1 Regulator of human erythroid cell expansion (RHEX) EphA2_TM PF14575.6 ORF34709 - 0.0089 16.9 0.2 0.013 16.3 0.2 1.5 1 1 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain CTX_RstB PF07459.11 ORF34709 - 0.084 13.1 0.1 0.15 12.3 0.1 1.5 1 0 0 1 1 1 0 CTX phage RstB protein Choline_kinase PF01633.20 ORF34557 - 0.01 15.4 0.4 0.015 14.9 0.2 1.3 1 1 0 1 1 1 0 Choline/ethanolamine kinase OAD_gamma PF04277.13 ORF34557 - 0.8 10.3 3.8 1.8 9.2 3.8 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Saccharop_dh_N PF04455.12 ORF34000 - 1.3e-11 44.8 0.0 2e-11 44.2 0.0 1.3 1 0 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region fn3 PF00041.21 ORF33693 - 1.7e-10 41.1 6.2 1.3e-06 28.7 0.7 2.5 3 0 0 3 3 3 2 Fibronectin type III domain PIG-P PF08510.12 ORF32814 - 0.31 11.0 5.8 0.87 9.5 5.0 2.0 1 1 0 1 1 1 0 PIG-P RCC1 PF00415.18 ORF31510 - 3.4e-07 30.8 0.0 0.00034 21.2 0.1 3.8 3 1 0 3 3 3 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF31510 - 0.047 13.5 1.4 0.19 11.6 0.0 2.5 4 0 0 4 4 4 0 Regulator of chromosome condensation (RCC1) repeat Sugar_tr PF00083.24 ORF30742 - 1.5e-18 66.9 16.1 1.9e-18 66.6 16.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter OmpA_like PF16961.5 ORF30742 - 0.074 12.7 0.4 0.1 12.2 0.4 1.2 1 0 0 1 1 1 0 Putative OmpA-OmpF-like porin family DUF2070 PF09843.9 ORF30742 - 3.4 5.8 7.3 4.1 5.6 7.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FixQ PF05545.11 ORF30742 - 8.8 6.4 7.9 17 5.5 0.3 2.6 2 1 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ Pepdidase_M14_N PF18027.1 ORF30503 - 1.2e-12 48.1 0.3 2.1e-12 47.3 0.3 1.4 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain DeoRC PF00455.22 ORF29883 - 4.6e-56 189.2 0.5 5.5e-56 188.9 0.5 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain DUF218 PF02698.17 ORF29883 - 0.0065 16.5 0.2 0.1 12.6 0.1 2.1 1 1 1 2 2 2 1 DUF218 domain RCC1 PF00415.18 ORF25708 - 7.6e-14 52.1 0.5 4.5e-05 24.0 0.1 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF25708 - 3.8e-12 45.7 8.7 4.4e-06 26.3 0.3 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat zinc_ribbon_2 PF13240.6 ORF25509 - 0.051 13.3 0.1 0.088 12.6 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain EF-hand_7 PF13499.6 ORF24557 - 2.1e-13 50.5 5.5 1.5e-08 35.0 1.0 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF24557 - 1.8e-12 46.1 6.2 3e-07 29.8 0.1 4.4 4 0 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF24557 - 7.8e-08 31.3 9.6 4.6e-06 25.8 0.1 4.8 5 1 1 6 6 6 2 EF hand EF-hand_8 PF13833.6 ORF24557 - 2.9e-07 30.2 5.7 0.029 14.2 0.1 3.8 3 1 1 4 4 4 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF24557 - 1.7e-05 25.1 0.2 0.00035 20.9 0.1 2.6 2 1 0 2 2 2 1 EF-hand domain EF-hand_14 PF17959.1 ORF24557 - 0.00016 21.9 0.5 0.035 14.4 0.1 2.4 2 1 0 2 2 2 2 EF-hand domain SCF PF02404.15 ORF24557 - 0.018 14.4 0.2 0.025 13.9 0.2 1.3 1 0 0 1 1 1 0 Stem cell factor FlgD PF03963.14 ORF24557 - 0.062 13.6 1.8 0.087 13.1 0.1 2.0 2 0 0 2 2 2 0 Flagellar hook capping protein - N-terminal region DUF3008 PF11450.8 ORF24557 - 0.19 12.0 0.1 0.19 12.0 0.1 2.5 4 0 0 4 4 4 0 Protein of unknwon function (DUF3008) Pepdidase_M14_N PF18027.1 ORF1916 - 1.2e-12 48.1 0.3 2.1e-12 47.3 0.3 1.4 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain DUF4551 PF15087.6 ORF17657 - 1.5 7.6 9.1 1.8 7.3 9.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) DUF4407 PF14362.6 ORF17036 - 2.5 7.4 8.5 5 6.4 8.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) NOZZLE PF08744.10 ORF14988 - 0.1 12.1 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Plant transcription factor NOZZLE CorC_HlyC PF03471.17 ORF14772 - 9.8e-16 57.5 0.1 1.8e-15 56.7 0.1 1.4 1 0 0 1 1 1 1 Transporter associated domain NIT PF08376.10 ORF14057 - 0.0028 18.2 0.0 0.0033 17.9 0.0 1.1 1 0 0 1 1 1 1 Nitrate and nitrite sensing DivIVA PF05103.13 ORF14057 - 0.042 13.9 4.8 0.076 13.1 1.9 2.2 1 1 1 2 2 2 0 DivIVA protein TK PF00265.18 ORF14057 - 0.052 13.4 0.3 0.063 13.1 0.3 1.3 1 0 0 1 1 1 0 Thymidine kinase U1snRNP70_N PF12220.8 ORF14057 - 0.18 12.5 2.8 0.098 13.3 0.7 1.7 2 0 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Got1 PF04178.12 ORF13283 - 0.0029 18.0 10.8 0.004 17.6 10.8 1.3 1 0 0 1 1 1 1 Got1/Sft2-like family DUF2207 PF09972.9 ORF13283 - 0.012 14.4 0.0 0.013 14.3 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TMEM51 PF15345.6 ORF13283 - 0.013 15.4 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Transmembrane protein 51 MafB19-deam PF14437.6 ORF12520 - 2e-33 115.1 0.0 2.5e-33 114.8 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase dCMP_cyt_deam_1 PF00383.23 ORF12520 - 3.2e-28 97.6 0.0 4.7e-28 97.0 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Bd3614-deam PF14439.6 ORF12520 - 0.0005 20.2 0.0 0.00086 19.4 0.0 1.5 1 0 0 1 1 1 1 Bd3614-like deaminase SNAD4 PF18750.1 ORF12520 - 0.00055 20.0 0.0 0.001 19.2 0.0 1.4 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC_N PF08210.11 ORF12520 - 0.012 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain NAD1 PF18778.1 ORF12520 - 0.013 15.6 0.0 0.024 14.7 0.0 1.4 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 NAD2 PF18782.1 ORF12520 - 0.02 15.0 0.0 0.026 14.6 0.0 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 APOBEC2 PF18772.1 ORF12520 - 0.028 14.5 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 APOBEC2 APOBEC3 PF18771.1 ORF12520 - 0.067 13.3 0.0 0.34 11.0 0.0 1.9 2 0 0 2 2 2 0 APOBEC3 NOZZLE PF08744.10 ORF11504 - 0.1 12.1 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Plant transcription factor NOZZLE NOZZLE PF08744.10 ORF110739 - 0.1 12.1 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Plant transcription factor NOZZLE Draxin PF15550.6 ORF109917 - 0.066 13.1 7.0 0.08 12.8 7.0 1.1 1 0 0 1 1 1 0 Draxin Rtf2 PF04641.12 ORF108874 - 0.024 14.0 0.1 0.026 13.9 0.1 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger Cytochrom_C PF00034.21 ORF108874 - 0.063 14.4 0.2 0.11 13.6 0.2 1.3 1 0 0 1 1 1 0 Cytochrome c zf-Di19 PF05605.12 ORF108874 - 0.17 12.2 0.0 0.31 11.4 0.0 1.4 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding ubiquitin PF00240.23 ORF10846 - 0.0029 17.3 0.0 0.0055 16.4 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin family EamA PF00892.20 ORF107133 - 0.27 11.4 6.4 0.51 10.5 6.4 1.5 1 1 0 1 1 1 0 EamA-like transporter family Ank_2 PF12796.7 ORF106978 - 1.5e-09 38.3 0.0 2.2e-08 34.6 0.0 2.1 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF106978 - 1e-08 35.6 0.1 0.0032 18.0 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF106978 - 4.9e-06 26.7 0.0 1.1 9.8 0.1 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF106978 - 0.0016 18.8 0.0 12 6.8 0.0 3.5 3 1 0 3 3 3 2 Ankyrin repeat SNARE PF05739.19 ORF106246 - 2.4e-05 24.2 0.1 5e-05 23.2 0.1 1.6 1 0 0 1 1 1 1 SNARE domain Syntaxin-6_N PF09177.11 ORF106246 - 0.0019 18.7 9.7 0.0026 18.3 0.1 2.5 2 1 0 2 2 2 1 Syntaxin 6, N-terminal DUF4559 PF15112.6 ORF106246 - 0.1 12.3 10.8 0.12 12.0 10.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) DUF4674 PF15719.5 ORF106246 - 1.3 9.1 8.6 0.84 9.6 1.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4674) FUSC PF04632.12 ORF106246 - 1.7 7.1 7.1 2.4 6.6 7.1 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF2333 PF10095.9 ORF106246 - 2.1 7.3 7.7 2.5 7.0 7.7 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2333) TMPIT PF07851.13 ORF106246 - 2.3 7.4 10.0 6.2 6.0 10.0 1.7 1 1 0 1 1 1 0 TMPIT-like protein Exonuc_VII_L PF02601.15 ORF106246 - 3.3 7.2 13.9 4.7 6.7 13.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Sec20 PF03908.13 ORF106246 - 5.6 7.0 9.4 13 5.8 6.3 2.6 2 1 0 2 2 2 0 Sec20 FKBP_C PF00254.28 ORF105974 - 1.2e-07 31.9 0.0 3.6e-07 30.4 0.0 1.7 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase ubiquitin PF00240.23 ORF105178 - 0.02 14.6 0.1 0.048 13.4 0.1 1.7 1 1 0 1 1 1 0 Ubiquitin family Mito_carr PF00153.27 ORF103126 - 2.5e-11 43.3 0.7 6e-06 26.1 0.1 2.3 2 0 0 2 2 2 2 Mitochondrial carrier protein Ribosomal_S17e PF00833.18 ORF103126 - 0.078 12.9 0.7 0.6 10.0 0.0 2.2 2 0 0 2 2 2 0 Ribosomal S17 Gram_pos_anchor PF00746.21 ORF102461 - 5.9 6.9 5.7 12 6.0 1.3 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Ras PF00071.22 ORF101443 - 3.2e-05 23.6 4.9 0.0016 18.0 4.9 2.2 1 1 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF101443 - 0.00078 18.9 0.6 0.00078 18.9 0.6 1.6 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit Arf PF00025.21 ORF101443 - 0.0017 17.8 3.3 0.0048 16.4 0.8 2.2 2 1 0 2 2 2 1 ADP-ribosylation factor family Roc PF08477.13 ORF101443 - 0.0034 17.6 2.8 0.073 13.3 2.8 2.2 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase PduV-EutP PF10662.9 ORF101443 - 0.0069 16.1 0.7 0.011 15.4 0.7 1.5 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation AAA_28 PF13521.6 ORF101443 - 0.0088 16.3 0.1 0.015 15.5 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 ORF101443 - 0.013 15.6 0.4 0.013 15.6 0.4 2.0 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.20 ORF101443 - 0.039 13.1 6.3 0.097 11.8 6.3 1.6 1 1 0 1 1 1 0 G-protein alpha subunit AAA_18 PF13238.6 ORF101443 - 0.084 13.4 2.0 0.17 12.4 1.8 2.0 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF101443 - 0.23 11.2 6.7 2.7 7.7 6.7 2.4 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF101443 - 0.3 11.2 2.6 0.58 10.3 2.6 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase GPR15L PF15854.5 ORF101384 - 1.9 8.8 0.0 1.9 8.8 0.0 3.1 4 0 0 4 4 4 0 G-protein coupled receptor ligand 15 CLAMP PF14769.6 ORF1 - 0.0093 16.4 1.2 0.018 15.5 0.9 1.6 2 1 0 2 2 2 1 Flagellar C1a complex subunit C1a-32 Herpes_UL52 PF03121.15 ORF1 - 0.12 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase WD40 PF00400.32 NODE_39540_length_529_cov_1.607287_g32129_i0forward_frame_1 - 0.0029 18.4 0.1 0.012 16.5 0.0 2.1 3 0 0 3 3 3 1 WD domain, G-beta repeat EF-hand_1 PF00036.32 NODE_39534_length_529_cov_3.145749_g32123_i0forward_frame_1 - 0.00018 20.8 0.2 0.00067 19.0 0.0 2.1 3 0 0 3 3 3 1 EF hand EF-hand_5 PF13202.6 NODE_39534_length_529_cov_3.145749_g32123_i0forward_frame_1 - 0.0011 18.4 0.0 0.003 17.0 0.0 1.7 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 NODE_39534_length_529_cov_3.145749_g32123_i0forward_frame_1 - 0.0055 16.5 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_39534_length_529_cov_3.145749_g32123_i0forward_frame_1 - 0.0066 16.3 0.0 0.032 14.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 NODE_39534_length_529_cov_3.145749_g32123_i0forward_frame_1 - 0.028 14.8 0.0 0.056 13.9 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair HMGL-like PF00682.19 NODE_39533_length_529_cov_3.263158_g32122_i0forward_frame_1 - 2.7e-61 207.5 2.6 3e-61 207.3 2.6 1.0 1 0 0 1 1 1 1 HMGL-like Trp_syntA PF00290.20 NODE_39533_length_529_cov_3.263158_g32122_i0forward_frame_1 - 0.027 13.3 0.0 0.046 12.6 0.0 1.4 1 0 0 1 1 1 0 Tryptophan synthase alpha chain DUF421 PF04239.12 NODE_39532_length_529_cov_3.334008_g32121_i0reverse_frame_1 - 5.6e-05 22.9 0.0 8.3e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF421) CBP_BcsF PF11120.8 NODE_39532_length_529_cov_3.334008_g32121_i0reverse_frame_1 - 0.12 12.5 4.6 14 5.8 0.1 3.1 2 1 1 3 3 3 0 Cellulose biosynthesis protein BcsF HTH_18 PF12833.7 NODE_39531_length_529_cov_3.876518_g32120_i0reverse_frame_1 - 0.069 13.4 1.3 0.069 13.4 1.3 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain DUF5348 PF17295.2 NODE_39480_length_530_cov_2.612121_g32073_i0forward_frame_1 - 0.054 13.4 0.0 0.085 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5348) Helitron_like_N PF14214.6 NODE_39480_length_530_cov_2.612121_g32073_i0forward_frame_1 - 0.079 13.2 0.0 0.097 12.9 0.0 1.1 1 0 0 1 1 1 0 Helitron helicase-like domain at N-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks118.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks118.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks118.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks118.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:48:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RTP801_C PF07809.11 NODE_39471_length_530_cov_72.084848_g32064_i0reverse_frame_1 - 0.091 12.7 0.0 0.56 10.1 0.0 1.9 1 1 1 2 2 2 0 RTP801 C-terminal region DUF4921 PF16268.5 NODE_39448_length_530_cov_524.303030_g32041_i0reverse_frame_1 - 0.078 11.8 0.1 0.094 11.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4921) mRNA_stabil PF13929.6 NODE_39439_length_531_cov_1.971774_g32036_i0reverse_frame_1 - 0.012 14.6 0.3 0.016 14.2 0.3 1.2 1 0 0 1 1 1 0 mRNA stabilisation RVT_1 PF00078.27 NODE_39436_length_531_cov_2.945565_g32033_i0forward_frame_1 - 3.2e-25 88.9 0.0 3.7e-25 88.8 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DoxA PF07680.11 NODE_39436_length_531_cov_2.945565_g32033_i0forward_frame_1 - 0.047 13.6 0.0 0.07 13.0 0.0 1.2 1 0 0 1 1 1 0 TQO small subunit DoxA DUF4404 PF14357.6 NODE_39429_length_531_cov_16.207661_g32026_i0forward_frame_1 - 0.043 14.5 0.5 0.043 14.5 0.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) OAD_gamma PF04277.13 NODE_39424_length_531_cov_71.020161_g32021_i0reverse_frame_1 - 3.3 8.4 12.4 1.7 9.3 1.9 3.0 3 1 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain RPN1_C PF18051.1 NODE_39407_length_531_cov_135.235887_g32004_i0reverse_frame_1 - 0.00086 19.3 5.2 73 3.5 0.0 5.9 6 0 0 6 6 6 1 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal GTP1_OBG PF01018.22 NODE_39407_length_531_cov_135.235887_g32004_i0reverse_frame_1 - 1.8 8.2 5.3 22 4.6 0.4 2.7 1 1 3 4 4 4 0 GTP1/OBG FLYWCH_u PF16662.5 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_1 - 0.2 11.7 9.6 5.4 7.1 1.1 3.9 1 1 3 4 4 4 0 FLYWCH-type zinc finger-containing protein 1 SUR7 PF06687.12 NODE_39393_length_531_cov_382.953629_g31990_i0reverse_frame_1 - 1.9 8.1 9.6 2.8 7.5 9.6 1.3 1 0 0 1 1 1 0 SUR7/PalI family DUF805 PF05656.14 NODE_39393_length_531_cov_382.953629_g31990_i0reverse_frame_1 - 5.4 7.5 8.6 0.26 11.7 3.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF805) Thioredoxin_16 PF18569.1 NODE_39384_length_531_cov_38839.167339_g31984_i0forward_frame_1 - 0.19 11.9 1.3 1.2 9.3 0.1 2.4 2 0 0 2 2 2 0 Thioredoxin-like domain BPD_transp_2 PF02653.16 NODE_39376_length_532_cov_2.929577_g31977_i0reverse_frame_3 - 0.093 11.9 0.1 0.12 11.5 0.1 1.0 1 0 0 1 1 1 0 Branched-chain amino acid transport system / permease component SpoU_methylase PF00588.19 NODE_39376_length_532_cov_2.929577_g31977_i0reverse_frame_2 - 8.3e-21 74.6 0.0 1.2e-20 74.1 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family RIFIN PF02009.16 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 9.4e-05 22.5 1.4 0.0001 22.3 1.4 1.1 1 0 0 1 1 1 1 Rifin Orf78 PF06024.12 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.0016 18.7 0.3 0.0026 18.0 0.3 1.2 1 0 0 1 1 1 1 Orf78 (ac78) Stevor PF17410.2 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.0019 17.8 2.6 0.0024 17.5 2.6 1.1 1 0 0 1 1 1 1 Subtelomeric Variable Open Reading frame DUF5383 PF17355.2 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.0068 16.8 1.8 0.012 16.0 1.8 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5383) TMEM154 PF15102.6 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.0075 16.2 14.7 0.012 15.5 14.7 1.3 1 0 0 1 1 1 1 TMEM154 protein family SP_C-Propep PF08999.10 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.024 14.4 4.5 0.038 13.8 4.5 1.3 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF5305 PF17231.2 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.041 13.3 9.1 0.055 12.9 9.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) MGC-24 PF05283.11 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.043 14.3 10.6 0.064 13.7 10.6 1.3 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Renin_r PF07850.14 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.054 14.1 3.2 0.09 13.4 3.2 1.3 1 0 0 1 1 1 0 Renin receptor-like protein SSP160 PF06933.11 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.13 10.4 28.3 0.17 10.0 28.3 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Peptidase_M56 PF05569.11 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.17 11.1 4.1 0.24 10.5 4.1 1.2 1 0 0 1 1 1 0 BlaR1 peptidase M56 FSA_C PF10479.9 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 1.7 6.7 13.9 2 6.4 13.9 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Viral_Beta_CD PF04530.12 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 5.7 7.3 9.2 8.8 6.6 9.2 1.2 1 0 0 1 1 1 0 Viral Beta C/D like family AF-4 PF05110.13 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_3 - 0.34 9.0 11.5 0.41 8.7 11.5 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein Secretin_N_2 PF07655.13 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_3 - 0.77 10.3 11.6 1.2 9.7 11.6 1.3 1 0 0 1 1 1 0 Secretin N-terminal domain FAM199X PF15814.5 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_3 - 0.94 8.5 12.0 2.6 7.0 11.5 1.7 2 0 0 2 2 2 0 Protein family FAM199X CDK2AP PF09806.9 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_3 - 1.9 8.5 4.3 2.7 8.0 4.3 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein Radical_SAM PF04055.21 NODE_39374_length_532_cov_3.981891_g31975_i0forward_frame_3 - 0.00052 20.4 0.3 0.0011 19.4 0.3 1.7 1 1 0 1 1 1 1 Radical SAM superfamily TMEM239 PF15841.5 NODE_39374_length_532_cov_3.981891_g31975_i0forward_frame_3 - 0.037 13.9 0.0 3.9 7.4 0.0 2.1 2 0 0 2 2 2 0 Transmembrane protein 239 family PAN_1 PF00024.26 NODE_39342_length_532_cov_361.702213_g31944_i0reverse_frame_2 - 3.5e-05 23.7 1.5 6e-05 22.9 1.5 1.4 1 0 0 1 1 1 1 PAN domain PAN_4 PF14295.6 NODE_39342_length_532_cov_361.702213_g31944_i0reverse_frame_2 - 0.00041 20.2 1.4 0.00098 19.0 0.6 2.0 2 0 0 2 2 2 1 PAN domain PTS_EIIA_2 PF00359.22 NODE_39333_length_533_cov_1.923695_g31937_i0forward_frame_2 - 5.3e-19 68.6 0.1 8.1e-19 67.9 0.1 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Tagatose_6_P_K PF08013.11 NODE_39333_length_533_cov_1.923695_g31937_i0forward_frame_2 - 3.2e-09 36.0 0.0 4.8e-09 35.4 0.0 1.3 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase Gly_acyl_tr_N PF06021.11 NODE_39330_length_533_cov_1.995984_g31934_i0reverse_frame_2 - 0.13 12.3 0.2 0.17 12.0 0.2 1.2 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase MreB_Mbl PF06723.13 NODE_39330_length_533_cov_1.995984_g31934_i0forward_frame_3 - 0.17 10.7 0.2 0.22 10.3 0.2 1.1 1 0 0 1 1 1 0 MreB/Mbl protein DoxX_3 PF13781.6 NODE_39329_length_533_cov_2.018072_g31933_i0reverse_frame_3 - 0.043 14.5 0.3 0.39 11.4 0.0 2.0 2 0 0 2 2 2 0 DoxX-like family NiFeSe_Hases PF00374.19 NODE_39320_length_533_cov_2.935743_g31924_i0reverse_frame_2 - 5.3e-14 52.0 0.0 6.8e-14 51.6 0.0 1.1 1 0 0 1 1 1 1 Nickel-dependent hydrogenase Complex1_49kDa PF00346.19 NODE_39320_length_533_cov_2.935743_g31924_i0reverse_frame_2 - 0.15 11.1 0.1 0.23 10.5 0.1 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit zf_UBZ PF18439.1 NODE_39320_length_533_cov_2.935743_g31924_i0forward_frame_3 - 0.083 12.5 0.1 0.16 11.6 0.1 1.5 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger KRTAP PF11759.8 NODE_39318_length_533_cov_3.365462_g31922_i0reverse_frame_3 - 6.6 7.4 7.5 1.3 9.6 1.4 2.3 2 1 0 2 2 2 0 Keratin-associated matrix GET2 PF08690.10 NODE_39317_length_533_cov_3.578313_g31921_i0reverse_frame_2 - 0.14 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 RrnaAD PF00398.20 NODE_39315_length_533_cov_4.176707_g31919_i0forward_frame_3 - 2.4e-62 210.4 0.0 2.7e-62 210.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase DUF3989 PF13150.6 NODE_39311_length_533_cov_41.554217_g31915_i0forward_frame_2 - 0.56 10.0 3.2 0.89 9.3 1.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) Bac_small_YrzI PF09501.10 NODE_39305_length_533_cov_65.656627_g31909_i0forward_frame_3 - 0.022 14.9 1.9 1.1 9.4 0.2 2.4 2 0 0 2 2 2 0 Probable sporulation protein (Bac_small_yrzI) HTH_5 PF01022.20 NODE_39304_length_533_cov_65.706827_g31908_i0reverse_frame_3 - 0.15 12.0 1.4 8.5 6.3 0.1 2.5 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_36 PF13730.6 NODE_39304_length_533_cov_65.706827_g31908_i0reverse_frame_3 - 2 8.4 4.9 12 5.9 0.1 3.0 3 0 0 3 3 3 0 Helix-turn-helix domain GSu_C4xC__C2xCH PF09698.10 NODE_39302_length_533_cov_76.795181_g31498_i1reverse_frame_2 - 0.017 15.9 0.8 0.017 15.9 0.8 2.2 2 0 0 2 2 2 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) DUF4345 PF14248.6 NODE_39302_length_533_cov_76.795181_g31498_i1forward_frame_3 - 0.071 13.0 0.6 0.14 12.0 0.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4345) Diphthamide_syn PF01866.17 NODE_39299_length_533_cov_84.417671_g31904_i0reverse_frame_3 - 6.5e-38 130.9 0.0 9.5e-38 130.3 0.0 1.2 1 0 0 1 1 1 1 Putative diphthamide synthesis protein TIR_3 PF18567.1 NODE_39299_length_533_cov_84.417671_g31904_i0reverse_frame_3 - 0.034 14.1 0.1 1.6 8.7 0.1 2.2 2 0 0 2 2 2 0 Toll/interleukin-1 receptor domain TMEM239 PF15841.5 NODE_39291_length_533_cov_97.823293_g31896_i0reverse_frame_3 - 0.038 13.9 0.1 0.053 13.4 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 239 family Furin-like_2 PF15913.5 NODE_39277_length_533_cov_176.130522_g31883_i0reverse_frame_2 - 0.63 10.2 16.6 0.15 12.2 7.1 2.2 1 1 1 2 2 2 0 Furin-like repeat, cysteine-rich Methyltransf_11 PF08241.12 NODE_39272_length_533_cov_355.789157_g31879_i0reverse_frame_3 - 0.063 13.9 0.2 0.22 12.2 0.1 2.0 1 1 0 2 2 2 0 Methyltransferase domain Ependymin PF00811.18 NODE_39272_length_533_cov_355.789157_g31879_i0forward_frame_3 - 0.029 14.6 0.1 0.038 14.3 0.1 1.2 1 0 0 1 1 1 0 Ependymin PH PF00169.29 NODE_39268_length_533_cov_568.385542_g31876_i0reverse_frame_2 - 7.8e-12 45.6 3.5 1.1e-11 45.2 3.5 1.2 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 NODE_39268_length_533_cov_568.385542_g31876_i0reverse_frame_2 - 0.0016 18.8 6.2 0.0026 18.2 6.2 1.3 1 0 0 1 1 1 1 Pleckstrin homology domain Transferase PF02458.15 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 0.02 13.6 0.0 0.025 13.3 0.0 1.0 1 0 0 1 1 1 0 Transferase family RP-C_C PF11800.8 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 0.022 14.8 0.6 0.026 14.6 0.6 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region Adaptin_binding PF10199.9 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 0.1 13.2 8.3 0.14 12.7 7.5 1.6 2 0 0 2 2 2 0 Alpha and gamma adaptin binding protein p34 ALMT PF11744.8 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 0.16 10.8 2.2 0.18 10.6 2.2 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter O-antigen_lig PF13425.6 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 1.5 7.5 5.9 2.2 7.0 5.9 1.3 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3149 PF11346.8 NODE_39265_length_533_cov_1157.277108_g31873_i0reverse_frame_3 - 0.0037 16.8 0.2 0.009 15.6 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3149) adh_short PF00106.25 NODE_39259_length_534_cov_2.679359_g31867_i0reverse_frame_2 - 4e-13 49.3 0.0 5e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_39259_length_534_cov_2.679359_g31867_i0reverse_frame_2 - 4e-05 23.3 0.0 0.00012 21.7 0.0 1.7 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 NODE_39259_length_534_cov_2.679359_g31867_i0reverse_frame_2 - 0.015 15.2 0.0 0.022 14.7 0.0 1.2 1 0 0 1 1 1 0 KR domain Polysacc_synt_2 PF02719.15 NODE_39259_length_534_cov_2.679359_g31867_i0reverse_frame_2 - 0.026 13.6 0.0 0.033 13.3 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Pyr_redox_2 PF07992.14 NODE_39259_length_534_cov_2.679359_g31867_i0reverse_frame_2 - 0.027 13.7 0.0 0.033 13.4 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 NODE_39259_length_534_cov_2.679359_g31867_i0reverse_frame_2 - 0.16 11.8 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GP41 PF00517.17 NODE_39258_length_534_cov_2.853707_g31866_i0reverse_frame_2 - 0.083 12.8 0.1 0.083 12.8 0.1 1.6 2 0 0 2 2 2 0 Retroviral envelope protein KRE1 PF17056.5 NODE_39258_length_534_cov_2.853707_g31866_i0forward_frame_3 - 0.08 12.7 0.4 0.08 12.7 0.4 2.2 3 0 0 3 3 3 0 Killer toxin-resistance protein 1 AlaDh_PNT_C PF01262.21 NODE_39257_length_534_cov_2.927856_g31865_i0reverse_frame_3 - 0.27 10.5 0.4 0.38 10.0 0.4 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DUF2390 PF09523.10 NODE_39253_length_534_cov_3.288577_g31861_i0reverse_frame_3 - 0.61 10.4 3.5 11 6.4 1.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2390) DEAD_assoc PF08494.11 NODE_39252_length_534_cov_3.326653_g31860_i0forward_frame_2 - 0.0073 16.1 0.1 0.0094 15.8 0.1 1.2 1 0 0 1 1 1 1 DEAD/H associated DUF3305 PF11749.8 NODE_39239_length_534_cov_90.611222_g31847_i0reverse_frame_3 - 0.16 12.1 0.1 5.5 7.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3305) YPEB PF14620.6 NODE_39236_length_534_cov_104.769539_g31844_i0forward_frame_2 - 0.098 12.0 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 YpeB sporulation PsiF_repeat PF07769.14 NODE_39234_length_534_cov_108.989980_g31842_i0reverse_frame_2 - 0.063 13.2 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 psiF repeat TRAP-gamma PF07074.12 NODE_39232_length_534_cov_116.348697_g31841_i0forward_frame_3 - 0.45 10.1 8.2 0.063 12.8 2.1 2.0 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DUF5639 PF18690.1 NODE_39220_length_534_cov_250.963928_g30794_i1forward_frame_2 - 0.074 13.2 0.8 0.12 12.6 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5639) BST2 PF16716.5 NODE_39214_length_534_cov_1878.412826_g31824_i0forward_frame_2 - 0.08 13.5 1.1 1.1 9.9 0.1 2.4 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 RNase_E_G PF10150.9 NODE_39212_length_534_cov_11581.488978_g31823_i0forward_frame_2 - 0.041 13.3 0.3 0.044 13.2 0.3 1.2 1 0 0 1 1 1 0 Ribonuclease E/G family Glyco_hydro_65C PF03633.15 NODE_39211_length_534_cov_30844.591182_g30592_i6reverse_frame_3 - 0.56 10.2 1.7 2.1 8.3 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain IFT43 PF15305.6 ORF99722 - 4.8e-24 85.1 0.2 6.4e-24 84.7 0.2 1.1 1 0 0 1 1 1 1 Intraflagellar transport protein 43 Peptidase_C1 PF00112.23 ORF97174 - 2.9e-25 89.7 3.1 3.2e-25 89.5 3.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Metallophos_2 PF12850.7 ORF96192 - 0.0093 16.2 0.0 0.016 15.4 0.0 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 ORF96192 - 0.07 13.6 0.0 0.14 12.6 0.0 1.5 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase Tctex-1 PF03645.13 ORF95565 - 1.7e-12 47.5 0.0 2.6e-12 46.9 0.0 1.3 1 0 0 1 1 1 1 Tctex-1 family Tox-HDC PF15656.6 ORF95425 - 0.035 14.3 1.9 0.068 13.4 1.9 1.4 1 0 0 1 1 1 0 Toxin with a H, D/N and C signature IQ PF00612.27 ORF95291 - 0.097 12.5 0.3 0.23 11.4 0.3 1.7 1 0 0 1 1 1 0 IQ calmodulin-binding motif DUF5344 PF17279.2 ORF94980 - 0.088 13.4 0.3 0.14 12.7 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5344) HasA PF06438.12 ORF94980 - 0.1 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Heme-binding protein A (HasA) FadA PF09403.10 ORF94980 - 0.1 13.1 0.2 0.16 12.4 0.2 1.2 1 0 0 1 1 1 0 Adhesion protein FadA Disintegrin PF00200.23 ORF94980 - 0.64 10.9 5.7 0.93 10.3 5.7 1.2 1 0 0 1 1 1 0 Disintegrin zf-B_box PF00643.24 ORF94980 - 2.3 8.4 15.0 0.25 11.5 10.7 1.6 2 0 0 2 2 2 0 B-box zinc finger MTS PF05175.14 ORF94882 - 1.9e-09 37.3 0.0 2.3e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 ORF94882 - 4.4e-09 36.2 0.0 5.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 ORF94882 - 1.3e-06 28.1 0.2 1.7e-06 27.6 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 ORF94882 - 0.00058 20.5 0.1 0.0011 19.6 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 ORF94882 - 0.0023 17.7 0.0 0.0029 17.4 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_16 PF10294.9 ORF94882 - 0.03 14.0 0.1 0.049 13.4 0.1 1.3 1 0 0 1 1 1 0 Lysine methyltransferase FA_desaturase PF00487.24 ORF94724 - 0.063 13.1 8.1 0.086 12.7 8.1 1.4 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF94724 - 1.3 8.6 13.8 1.6 8.4 13.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2207 PF09972.9 ORF94724 - 7 5.3 11.3 8.9 4.9 11.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ribosomal_L6 PF00347.23 ORF94624 - 1.9e-40 137.4 0.2 7.6e-19 68.2 0.0 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 MFS_1 PF07690.16 ORF91703 - 1.2e-06 27.7 24.2 1.4e-06 27.5 24.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily UbiA PF01040.18 ORF91703 - 4.1 6.6 18.1 73 2.5 17.6 2.2 1 1 0 1 1 1 0 UbiA prenyltransferase family DUF1295 PF06966.12 ORF88562 - 4e-42 144.3 0.7 4.6e-42 144.1 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF88562 - 1.8e-08 34.7 0.7 3.4e-08 33.8 0.4 1.6 1 1 0 1 1 1 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF88562 - 9.6e-07 28.9 4.1 1.5e-06 28.3 4.1 1.3 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF88562 - 8.5e-05 22.9 0.2 0.00015 22.1 0.2 1.5 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.17 ORF88562 - 0.0014 17.5 3.1 0.0015 17.3 3.1 1.2 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family PIRT PF15099.6 ORF88562 - 0.006 16.2 1.0 0.065 12.8 0.5 2.6 1 1 1 2 2 2 1 Phosphoinositide-interacting protein family MerC PF03203.14 ORF88562 - 0.066 13.7 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 MerC mercury resistance protein KH_1 PF00013.29 ORF88102 - 2.4e-14 52.9 0.0 3.6e-14 52.3 0.0 1.3 1 0 0 1 1 1 1 KH domain zf-C2H2_jaz PF12171.8 ORF88102 - 0.0039 17.4 0.6 0.017 15.4 0.0 2.1 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding KH_2 PF07650.17 ORF88102 - 0.0065 16.3 0.0 0.012 15.4 0.0 1.4 1 0 0 1 1 1 1 KH domain zf-met PF12874.7 ORF88102 - 0.0091 16.4 0.2 0.0091 16.4 0.2 1.9 2 0 0 2 2 2 1 Zinc-finger of C2H2 type KH_4 PF13083.6 ORF88102 - 0.085 12.7 0.0 0.22 11.4 0.0 1.6 1 0 0 1 1 1 0 KH domain YdjO PF14169.6 ORF88102 - 0.11 12.2 0.2 0.11 12.2 0.2 2.2 3 0 0 3 3 3 0 Cold-inducible protein YdjO AKAP95 PF04988.12 ORF88102 - 0.16 12.2 2.7 0.6 10.3 0.2 2.1 2 0 0 2 2 2 0 A-kinase anchoring protein 95 (AKAP95) Microcephalin PF12258.8 ORF87231 - 0.1 11.8 0.1 0.12 11.6 0.1 1.1 1 0 0 1 1 1 0 Microcephalin protein ENOD40 PF08247.11 ORF86318 - 0.92 9.6 3.6 9.9 6.4 0.2 2.5 2 0 0 2 2 2 0 ENOD40 protein zf-LSD1 PF06943.12 ORF86099 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger DUF3165 PF11364.8 ORF85278 - 0.0039 17.5 0.5 0.007 16.7 0.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3165) zf-LSD1 PF06943.12 ORF83793 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger MSSP PF03940.13 ORF83537 - 0.14 11.8 2.9 0.31 10.7 2.9 1.5 1 0 0 1 1 1 0 Male specific sperm protein Totivirus_coat PF05518.11 ORF83123 - 0.49 8.4 3.8 0.62 8.1 3.8 1.0 1 0 0 1 1 1 0 Totivirus coat protein HECW_N PF16562.5 ORF82851 - 0.12 12.2 1.6 0.28 11.0 1.6 1.7 1 1 0 1 1 1 0 N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2 WD40 PF00400.32 ORF82046 - 2.6e-28 97.7 7.5 3.2e-07 30.9 0.0 4.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF82046 - 1.4e-13 50.9 0.7 3.6e-06 27.2 0.1 3.9 1 1 3 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF82046 - 3.6e-06 26.2 1.2 0.026 13.5 0.1 2.7 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 ORF82046 - 0.00016 21.1 4.8 0.0032 16.9 4.8 1.9 1 1 0 1 1 1 1 WD40-like domain Nup160 PF11715.8 ORF82046 - 0.00068 18.4 3.5 0.32 9.6 1.0 3.1 1 1 1 2 2 2 2 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF82046 - 0.001 17.9 0.5 0.38 9.4 0.1 2.3 1 1 1 2 2 2 2 Nup133 N terminal like PXT1 PF15214.6 ORF82046 - 0.019 15.3 0.4 0.046 14.1 0.0 1.7 2 0 0 2 2 2 0 Peroxisomal testis-specific protein 1 OapA PF04225.12 ORF82046 - 0.1 12.7 0.0 0.24 11.5 0.0 1.7 2 0 0 2 2 2 0 Opacity-associated protein A LysM-like domain GLTT PF01744.20 ORF80555 - 1.2 8.9 4.0 1.9 8.4 0.1 2.9 3 0 0 3 3 3 0 GLTT repeat (6 copies) DUF1295 PF06966.12 ORF78803 - 4e-42 144.3 0.7 4.6e-42 144.1 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF78803 - 1.8e-08 34.7 0.7 3.4e-08 33.8 0.4 1.6 1 1 0 1 1 1 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF78803 - 9.5e-07 28.9 4.1 1.5e-06 28.3 4.1 1.3 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF78803 - 8.5e-05 22.9 0.2 0.00015 22.1 0.2 1.5 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.17 ORF78803 - 0.0014 17.5 3.1 0.0015 17.3 3.1 1.2 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family PIRT PF15099.6 ORF78803 - 0.0059 16.2 1.0 0.065 12.8 0.5 2.6 1 1 1 2 2 2 1 Phosphoinositide-interacting protein family MerC PF03203.14 ORF78803 - 0.066 13.7 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 MerC mercury resistance protein PPR PF01535.20 ORF78528 - 3e-08 33.4 3.9 0.00098 19.2 0.2 3.3 3 0 0 3 3 3 2 PPR repeat PPR_2 PF13041.6 ORF78528 - 0.00057 20.0 2.2 0.48 10.7 0.1 3.2 2 1 1 3 3 3 2 PPR repeat family PPR_long PF17177.4 ORF78528 - 0.034 13.5 0.0 4.5 6.6 0.0 1.7 1 1 1 2 2 2 0 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 ORF78528 - 0.06 13.4 0.0 0.64 10.1 0.0 2.2 1 1 1 2 2 2 0 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF78528 - 0.07 12.8 0.0 0.38 10.5 0.0 2.1 2 0 0 2 2 2 0 PPR repeat TMEM52 PF14979.6 ORF77020 - 0.064 13.2 0.0 0.093 12.6 0.0 1.2 1 0 0 1 1 1 0 Transmembrane 52 PgaD PF13994.6 ORF77020 - 0.15 12.1 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 PgaD-like protein Sigma_reg_N PF13800.6 ORF77020 - 0.22 11.8 1.0 0.49 10.7 1.0 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF1295 PF06966.12 ORF75983 - 4e-42 144.3 0.7 4.6e-42 144.1 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF75983 - 1.8e-08 34.7 0.7 3.4e-08 33.8 0.4 1.6 1 1 0 1 1 1 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF75983 - 9.5e-07 28.9 4.1 1.5e-06 28.3 4.1 1.3 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF75983 - 8.5e-05 22.9 0.2 0.00015 22.1 0.2 1.5 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.17 ORF75983 - 0.0014 17.5 3.1 0.0015 17.3 3.1 1.2 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family PIRT PF15099.6 ORF75983 - 0.0059 16.2 1.0 0.065 12.8 0.5 2.6 1 1 1 2 2 2 1 Phosphoinositide-interacting protein family MerC PF03203.14 ORF75983 - 0.066 13.7 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 MerC mercury resistance protein Phage-A118_gp45 PF10653.9 ORF74968 - 0.016 15.2 0.5 0.7 10.0 0.0 2.4 2 0 0 2 2 2 0 Protein gp45 of Bacteriophage A118 Rootletin PF15035.6 ORF74574 - 0.0004 20.4 0.0 0.00043 20.4 0.0 1.1 1 0 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion GAS PF13851.6 ORF74574 - 0.00077 18.9 0.1 0.0011 18.4 0.1 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding bZIP_1 PF00170.21 ORF74574 - 0.0094 16.0 0.3 0.031 14.4 0.1 1.8 1 1 0 1 1 1 1 bZIP transcription factor ZapB PF06005.12 ORF74574 - 0.017 15.6 4.6 0.093 13.2 4.6 1.9 1 1 0 1 1 1 0 Cell division protein ZapB APG6_N PF17675.1 ORF74574 - 0.029 14.9 1.2 0.042 14.4 1.2 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region ATG16 PF08614.11 ORF74574 - 0.03 14.6 0.9 0.042 14.1 0.9 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DivIC PF04977.15 ORF74574 - 0.054 13.3 1.4 4.3 7.2 0.5 2.2 1 1 1 2 2 2 0 Septum formation initiator Bac_rhodopsin PF01036.18 ORF74574 - 0.064 12.8 0.5 0.088 12.4 0.5 1.1 1 0 0 1 1 1 0 Bacteriorhodopsin-like protein Macoilin PF09726.9 ORF74574 - 0.085 11.4 0.0 0.093 11.3 0.0 1.1 1 0 0 1 1 1 0 Macoilin family Jnk-SapK_ap_N PF09744.9 ORF74574 - 0.11 12.8 0.7 0.15 12.3 0.7 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 UPF0449 PF15136.6 ORF74574 - 0.12 12.8 0.1 0.22 12.0 0.1 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 DUF1664 PF07889.12 ORF74574 - 0.19 11.8 1.0 0.3 11.1 1.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) bZIP_2 PF07716.15 ORF74574 - 0.53 10.4 3.0 10 6.3 0.2 2.2 1 1 1 2 2 2 0 Basic region leucine zipper Phage_Gp23 PF10669.9 ORF74081 - 0.016 15.5 2.1 0.1 13.0 1.2 2.1 2 0 0 2 2 2 0 Protein gp23 (Bacteriophage A118) RTT107_BRCT_5 PF16770.5 ORF73937 - 1.2e-06 28.3 0.0 1.7e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Regulator of Ty1 transposition protein 107 BRCT domain BRCT_2 PF16589.5 ORF73937 - 0.00049 20.5 0.0 0.066 13.6 0.0 2.2 2 0 0 2 2 2 2 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 ORF73937 - 0.02 15.2 0.0 0.053 13.9 0.0 1.7 2 0 0 2 2 2 0 BRCA1 C Terminus (BRCT) domain NAC PF01849.18 ORF73548 - 9e-24 83.2 0.6 1.9e-23 82.2 0.6 1.6 1 0 0 1 1 1 1 NAC domain ESCRT-II PF05871.12 ORF73400 - 9.6e-16 58.3 0.0 1.3e-15 57.9 0.0 1.2 1 0 0 1 1 1 1 ESCRT-II complex subunit ACR_tran PF00873.19 ORF73327 - 2.3e-67 227.6 16.3 2.6e-67 227.4 16.3 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family ALG3 PF05208.13 ORF73327 - 0.081 12.3 1.1 0.092 12.2 1.1 1.2 1 0 0 1 1 1 0 ALG3 protein MMPL PF03176.15 ORF73327 - 0.49 9.3 9.5 0.61 9.0 9.5 1.2 1 0 0 1 1 1 0 MMPL family Pirin_C PF05726.13 ORF73062 - 1.3e-21 76.9 0.0 2.5e-21 76.0 0.0 1.4 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Macro PF01661.21 ORF72314 - 6e-09 36.0 0.0 3.7e-08 33.4 0.0 2.0 1 1 0 1 1 1 1 Macro domain Optomotor-blind PF11078.8 ORF719 - 0.046 14.3 1.1 2.7 8.6 0.1 2.2 2 0 0 2 2 2 0 Optomotor-blind protein N-terminal region SLBB PF10531.9 ORF71331 - 0.089 12.7 0.0 0.29 11.0 0.0 1.9 2 0 0 2 2 2 0 SLBB domain Macro PF01661.21 ORF70971 - 1.4e-41 141.3 0.0 1.7e-41 140.9 0.0 1.1 1 0 0 1 1 1 1 Macro domain RPN1_C PF18051.1 ORF66361 - 4.7e-29 100.2 0.1 7.5e-29 99.5 0.1 1.3 1 0 0 1 1 1 1 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal SUR7 PF06687.12 ORF6613 - 0.0077 15.9 2.9 0.0077 15.9 2.9 1.4 2 0 0 2 2 2 1 SUR7/PalI family PIRT PF15099.6 ORF6613 - 0.49 10.0 5.0 0.061 12.9 0.8 1.6 2 0 0 2 2 2 0 Phosphoinositide-interacting protein family LptF_LptG PF03739.14 ORF66012 - 6.8 5.4 10.1 8.8 5.1 10.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG DUF5401 PF17380.2 ORF66012 - 7.5 4.5 31.8 9 4.2 31.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Sugar_tr PF00083.24 ORF64663 - 3e-31 108.8 9.2 3.3e-31 108.7 9.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter HAP2-GCS1 PF10699.9 ORF63948 - 0.039 13.9 0.3 0.13 12.3 0.0 1.9 2 0 0 2 2 2 0 Male gamete fusion factor LicD PF04991.13 ORF63677 - 0.26 11.4 10.0 0.065 13.4 5.7 1.8 1 1 1 2 2 2 0 LicD family DUF4820 PF16091.5 ORF63677 - 6.2 6.1 10.0 8.3 5.7 10.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) GHL10 PF02638.15 ORF62879 - 0.022 13.9 0.2 0.031 13.3 0.2 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase-like 10 AMP-binding PF00501.28 ORF62438 - 2e-22 79.4 0.1 2.7e-22 79.0 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF62438 - 1.9e-16 60.8 0.2 2.9e-16 60.2 0.2 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain LRR_8 PF13855.6 ORF61597 - 3.3e-23 81.2 22.3 5.1e-09 35.8 4.4 3.3 3 0 0 3 3 3 3 Leucine rich repeat LRR_4 PF12799.7 ORF61597 - 1e-21 76.7 27.0 6.3e-07 29.6 4.0 4.4 2 1 1 4 4 4 4 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF61597 - 1.8e-11 43.9 6.6 8.7e-06 25.3 2.3 2.5 1 1 1 2 2 2 2 Leucine-rich repeat LRR_1 PF00560.33 ORF61597 - 1.4e-09 37.1 20.2 0.016 15.7 0.5 6.7 6 1 0 6 6 6 3 Leucine Rich Repeat LRR_6 PF13516.6 ORF61597 - 1.4e-07 31.0 21.1 0.085 13.0 0.2 7.3 7 1 1 8 8 8 3 Leucine Rich repeat LRR_3 PF07725.12 ORF61597 - 8.4 6.4 7.2 19 5.3 0.3 3.5 3 0 0 3 3 3 0 Leucine Rich Repeat P21-Arc PF04062.14 ORF5661 - 3.4e-52 177.0 0.0 3.7e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 ARP2/3 complex ARPC3 (21 kDa) subunit DUF4381 PF14316.6 ORF56550 - 0.0086 16.3 2.1 0.014 15.7 2.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4381) LapA_dom PF06305.11 ORF56550 - 0.46 10.3 3.5 1.1 9.1 3.5 1.7 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain CSD PF00313.22 ORF55797 - 7.4e-23 80.2 6.0 9.4e-11 41.4 0.2 2.6 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain DUF11 PF01345.18 ORF55797 - 0.0059 16.9 0.8 0.02 15.2 0.5 1.8 2 0 0 2 2 2 1 Domain of unknown function DUF11 WD40 PF00400.32 ORF55383 - 9.9e-19 67.3 14.2 4.1e-09 36.9 0.2 4.7 5 0 0 5 5 5 4 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF55383 - 4.5e-09 35.7 0.1 0.0061 15.6 0.0 3.0 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 ORF55383 - 9.8e-09 35.4 0.0 0.00029 21.1 0.0 3.5 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF55383 - 6.4e-06 26.0 1.2 0.24 11.4 0.2 3.2 3 0 0 3 3 3 2 WD40-like Beta Propeller Repeat Cytochrom_D1 PF02239.16 ORF55383 - 0.013 14.1 0.0 0.014 14.0 0.0 1.2 1 0 0 1 1 1 0 Cytochrome D1 heme domain Nbas_N PF15492.6 ORF55383 - 0.022 14.1 1.3 0.92 8.8 0.0 2.9 1 1 3 4 4 4 0 Neuroblastoma-amplified sequence, N terminal Nup160 PF11715.8 ORF55383 - 0.046 12.4 0.7 1.2 7.7 0.0 2.6 1 1 2 3 3 3 0 Nucleoporin Nup120/160 eIF2A PF08662.11 ORF55383 - 0.06 13.2 0.0 0.35 10.7 0.0 1.9 1 1 1 2 2 2 0 Eukaryotic translation initiation factor eIF2A Proteasome_A_N PF10584.9 ORF55383 - 0.45 10.2 5.8 6.7 6.5 0.2 2.9 3 0 0 3 3 3 0 Proteasome subunit A N-terminal signature Thioredoxin_2 PF13098.6 ORF53927 - 0.11 13.0 0.1 0.21 12.0 0.1 1.6 1 1 0 1 1 1 0 Thioredoxin-like domain ANAPC4_WD40 PF12894.7 ORF53367 - 1.5e-05 25.2 0.0 8.8e-05 22.7 0.0 2.3 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF53367 - 0.00039 21.1 0.0 0.032 15.1 0.0 2.9 3 0 0 3 3 3 1 WD domain, G-beta repeat eIF-3c_N PF05470.12 ORF53367 - 0.0085 14.5 0.3 0.011 14.1 0.3 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 8 N-terminus Rav1p_C PF12234.8 ORF53367 - 0.1 11.0 0.0 0.14 10.5 0.0 1.2 1 0 0 1 1 1 0 RAVE protein 1 C terminal PIN_12 PF16289.5 ORF53298 - 1.7 9.1 9.9 2.5 8.6 8.9 1.8 1 1 0 1 1 1 0 PIN domain zf-LSD1 PF06943.12 ORF52887 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger Ephrin_rec_like PF07699.13 ORF52744 - 0.0025 17.5 4.0 0.0025 17.5 4.0 1.8 2 0 0 2 2 2 1 Putative ephrin-receptor like TNFR_c6 PF00020.18 ORF52744 - 0.05 14.0 2.1 0.05 14.0 2.1 3.0 1 1 2 3 3 3 0 TNFR/NGFR cysteine-rich region NCD3G PF07562.14 ORF52744 - 2.1 8.4 11.3 0.11 12.5 4.9 2.2 2 1 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR WD40 PF00400.32 ORF52149 - 2.6e-28 97.7 7.5 3.2e-07 30.9 0.0 4.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF52149 - 1.4e-13 50.9 0.7 3.6e-06 27.2 0.1 3.9 1 1 3 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF52149 - 3.6e-06 26.2 1.2 0.026 13.5 0.1 2.7 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 ORF52149 - 0.00016 21.1 4.8 0.0032 16.9 4.8 1.9 1 1 0 1 1 1 1 WD40-like domain Nup160 PF11715.8 ORF52149 - 0.00068 18.4 3.5 0.32 9.6 1.0 3.1 1 1 1 2 2 2 2 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF52149 - 0.001 17.9 0.5 0.38 9.4 0.1 2.3 1 1 1 2 2 2 2 Nup133 N terminal like PXT1 PF15214.6 ORF52149 - 0.019 15.3 0.4 0.046 14.1 0.0 1.7 2 0 0 2 2 2 0 Peroxisomal testis-specific protein 1 OapA PF04225.12 ORF52149 - 0.1 12.7 0.0 0.24 11.5 0.0 1.7 2 0 0 2 2 2 0 Opacity-associated protein A LysM-like domain TPR_2 PF07719.17 ORF50238 - 0.047 13.8 1.3 2.4 8.5 0.1 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat KIAA1430 PF13879.6 ORF50238 - 0.079 13.7 0.6 0.12 13.2 0.6 1.2 1 0 0 1 1 1 0 KIAA1430 homologue TPR_1 PF00515.28 ORF50238 - 0.21 11.5 1.4 2.4 8.1 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat CSD PF00313.22 ORF49845 - 2.6e-12 46.4 0.1 4.8e-06 26.3 0.0 3.2 3 1 0 3 3 3 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF49845 - 0.023 14.4 0.0 0.062 13.0 0.0 1.7 1 0 0 1 1 1 0 Ribonuclease B OB domain zf-CCCH PF00642.24 ORF49845 - 1.1 9.3 5.6 4.4 7.3 0.4 3.1 3 1 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) CAP_N PF01213.19 ORF49601 - 1.5 8.2 3.5 2.2 7.7 3.5 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Pilus_CpaD PF09476.10 ORF48908 - 0.12 12.1 0.9 19 4.9 0.0 2.7 2 1 0 2 2 2 0 Pilus biogenesis CpaD protein (pilus_cpaD) DUF3701 PF12482.8 ORF48908 - 0.13 12.4 0.0 0.26 11.4 0.0 1.5 1 1 0 1 1 1 0 Phage integrase protein CARD_2 PF16739.5 ORF48905 - 0.02 14.9 0.6 0.043 13.8 0.6 1.5 1 0 0 1 1 1 0 Caspase recruitment domain TF_AP-2 PF03299.14 ORF48905 - 0.033 14.2 0.1 0.046 13.7 0.1 1.3 1 0 0 1 1 1 0 Transcription factor AP-2 DUF1539 PF07560.11 ORF48905 - 0.1 12.7 0.2 0.18 11.9 0.2 1.4 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1539) ALC PF17527.2 ORF48905 - 0.14 11.8 0.1 0.24 11.0 0.1 1.3 1 0 0 1 1 1 0 Phage ALC protein RPN13_C PF16550.5 ORF48905 - 0.18 12.0 1.7 0.78 9.9 1.7 2.0 1 1 0 1 1 1 0 UCH-binding domain LicD PF04991.13 ORF48643 - 1.3 9.1 10.1 5.1 7.2 10.1 1.8 1 1 0 1 1 1 0 LicD family DUF4820 PF16091.5 ORF48643 - 2.9 7.2 7.9 3.6 6.9 7.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) HEAT PF02985.22 ORF46133 - 0.00033 20.7 0.0 0.0012 18.9 0.0 1.9 1 0 0 1 1 1 1 HEAT repeat HEAT_2 PF13646.6 ORF46133 - 0.00035 20.9 0.3 0.00053 20.3 0.3 1.3 1 0 0 1 1 1 1 HEAT repeats Arm PF00514.23 ORF46133 - 0.0085 16.1 0.0 0.018 15.1 0.0 1.5 1 0 0 1 1 1 1 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF46133 - 0.023 15.2 0.3 0.046 14.2 0.0 1.7 2 0 0 2 2 2 0 HEAT-like repeat Adaptin_N PF01602.20 ORF46133 - 0.17 10.4 0.2 0.23 10.0 0.2 1.0 1 0 0 1 1 1 0 Adaptin N terminal region HEAT_PBS PF03130.16 ORF46133 - 0.27 12.0 1.1 1.2 10.0 1.1 2.2 1 1 0 1 1 1 0 PBS lyase HEAT-like repeat PanZ PF12568.8 ORF44999 - 5.3e-06 26.2 1.4 6 6.6 0.0 4.9 5 0 0 5 5 5 2 Acetyltransferase (GNAT) domain, PanZ COMM_domain PF07258.14 ORF44999 - 1.7e-05 24.9 1.6 6.9 6.9 0.0 5.0 1 1 4 5 5 5 2 COMM domain DUF3692 PF12469.8 ORF44999 - 0.015 15.5 0.2 71 3.7 0.0 3.8 4 0 0 4 4 4 0 CRISPR-associated protein CN_hydrolase PF00795.22 ORF44999 - 0.16 11.3 1.2 1.3 8.2 0.9 2.5 1 1 1 2 2 2 0 Carbon-nitrogen hydrolase RL10P_insert PF17777.1 ORF44999 - 0.16 12.0 0.1 43 4.2 0.0 3.0 2 2 1 3 3 3 0 Insertion domain in 60S ribosomal protein L10P Alginate_exp PF13372.6 ORF44999 - 0.2 10.3 0.1 10 4.7 0.0 2.2 2 0 0 2 2 2 0 Alginate export DUF3165 PF11364.8 ORF44283 - 0.0039 17.5 0.5 0.007 16.7 0.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3165) WD40 PF00400.32 ORF44222 - 2.6e-28 97.7 7.5 3.2e-07 30.9 0.0 4.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF44222 - 1.4e-13 50.9 0.7 3.6e-06 27.2 0.1 3.9 1 1 3 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF44222 - 3.6e-06 26.2 1.2 0.026 13.5 0.1 2.7 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 ORF44222 - 0.00016 21.1 4.8 0.0032 16.9 4.8 1.9 1 1 0 1 1 1 1 WD40-like domain Nup160 PF11715.8 ORF44222 - 0.00068 18.4 3.5 0.32 9.6 1.0 3.1 1 1 1 2 2 2 2 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF44222 - 0.001 17.9 0.5 0.38 9.4 0.1 2.3 1 1 1 2 2 2 2 Nup133 N terminal like PXT1 PF15214.6 ORF44222 - 0.019 15.3 0.4 0.046 14.1 0.0 1.7 2 0 0 2 2 2 0 Peroxisomal testis-specific protein 1 OapA PF04225.12 ORF44222 - 0.1 12.7 0.0 0.24 11.5 0.0 1.7 2 0 0 2 2 2 0 Opacity-associated protein A LysM-like domain ubiquitin PF00240.23 ORF42874 - 0.0001 22.0 0.5 0.00052 19.7 0.0 2.0 2 0 0 2 2 2 1 Ubiquitin family ABC_tran PF00005.27 ORF42517 - 1.4e-14 54.8 0.0 2.5e-14 53.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_23 PF13476.6 ORF42517 - 0.00064 20.3 0.6 0.001 19.6 0.4 1.4 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF42517 - 0.0009 19.2 0.1 0.0013 18.7 0.1 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF42517 - 0.001 18.8 0.8 0.0016 18.1 0.3 1.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain SRP54 PF00448.22 ORF42517 - 0.0079 15.8 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_21 PF13304.6 ORF42517 - 0.01 15.7 0.3 0.016 15.0 0.1 1.5 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Ploopntkinase1 PF18748.1 ORF42517 - 0.013 15.0 0.0 0.028 13.9 0.0 1.6 1 1 0 1 1 1 0 P-loop Nucleotide Kinase1 AAA_30 PF13604.6 ORF42517 - 0.055 13.2 0.1 0.11 12.3 0.0 1.5 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 ORF42517 - 0.071 13.3 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 ORF42517 - 0.085 13.2 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_15 PF13175.6 ORF42517 - 0.12 12.1 0.5 0.2 11.4 0.4 1.4 1 1 0 1 1 1 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF42517 - 0.16 11.3 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Acid_PPase PF12689.7 ORF41408 - 0.0011 18.8 0.0 0.0066 16.3 0.0 1.9 2 0 0 2 2 2 1 Acid Phosphatase WD40 PF00400.32 ORF39792 - 7.3e-11 42.5 3.2 0.018 15.9 0.1 4.5 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF39792 - 0.00041 20.6 0.2 7.9 6.9 0.0 3.1 2 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain SLBB PF10531.9 ORF39125 - 0.089 12.7 0.0 0.29 11.0 0.0 1.9 2 0 0 2 2 2 0 SLBB domain Acetyltransf_1 PF00583.25 ORF38943 - 1.3e-11 44.7 0.0 1.8e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF38943 - 3.9e-07 30.4 0.0 5.4e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF38943 - 1.1e-05 25.4 0.0 1.6e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF38943 - 0.0039 17.3 0.0 0.0054 16.9 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF38943 - 0.0053 17.4 0.0 0.007 17.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Phlebovirus_G1 PF07243.11 ORF38846 - 0.076 11.4 0.0 0.094 11.1 0.0 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 DUF218 PF02698.17 ORF37226 - 9.7e-12 45.0 0.0 1.5e-11 44.4 0.0 1.3 1 1 0 1 1 1 1 DUF218 domain Peptidase_C1 PF00112.23 ORF34112 - 2.9e-25 89.7 3.1 3.2e-25 89.5 3.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Minor_capsid_3 PF12691.7 ORF34015 - 0.015 15.6 1.0 1.4 9.3 0.1 2.2 2 0 0 2 2 2 0 Minor capsid protein from bacteriophage Argos PF11581.8 ORF3391 - 0.031 14.3 1.3 0.16 12.0 0.2 2.2 1 1 0 2 2 2 0 Antagonist of EGFR signalling, Argos Homeobox_KN PF05920.11 ORF32754 - 1.8e-16 59.7 0.3 3.5e-16 58.8 0.3 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF32754 - 1.7e-05 24.5 0.6 4.5e-05 23.2 0.3 1.8 2 0 0 2 2 2 1 Homeodomain 2OG-FeII_Oxy_2 PF13532.6 ORF32062 - 9.3e-18 65.1 0.0 1.1e-17 64.9 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF1364 PF07102.12 ORF32062 - 0.099 12.5 0.3 0.17 11.7 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) zf-LSD1 PF06943.12 ORF316 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger DUF4401 PF14351.6 ORF29775 - 0.036 13.4 0.0 0.048 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4401) HCMV_UL139 PF12507.8 ORF29429 - 0.018 15.4 2.4 3 8.2 0.1 2.1 2 0 0 2 2 2 0 Human Cytomegalovirus UL139 protein VSG_B PF13206.6 ORF29429 - 0.24 10.6 3.3 0.34 10.1 3.3 1.3 1 0 0 1 1 1 0 Trypanosomal VSG domain WXG100 PF06013.12 ORF29429 - 0.32 11.2 5.3 3 8.1 0.7 2.8 3 0 0 3 3 3 0 Proteins of 100 residues with WXG DUF5082 PF16888.5 ORF29429 - 0.37 11.1 7.8 0.52 10.6 0.6 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) 60KD_IMP PF02096.20 ORF29429 - 1.5 8.7 2.7 16 5.4 0.1 2.3 2 1 0 2 2 2 0 60Kd inner membrane protein OmpH PF03938.14 ORF29429 - 2.5 8.4 16.9 4.5 7.6 2.9 2.2 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Cep57_MT_bd PF06657.13 ORF29429 - 5 7.7 11.9 0.26 11.8 1.3 2.6 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 Lectin_N PF03954.14 ORF29429 - 7.8 6.3 7.7 16 5.3 1.2 2.4 1 1 0 2 2 2 0 Hepatic lectin, N-terminal domain Swi5 PF07061.11 ORF29429 - 8.9 6.5 10.8 6.5 6.9 0.8 2.6 2 1 0 2 2 2 0 Swi5 WD40 PF00400.32 ORF29363 - 7.3e-11 42.5 3.2 0.018 15.9 0.1 4.5 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF29363 - 0.00041 20.6 0.2 7.9 6.9 0.0 3.1 2 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Aldo_ket_red PF00248.21 ORF29208 - 5e-18 65.3 0.0 5.9e-18 65.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Phage_lysozyme PF00959.19 ORF28071 - 1.6e-30 105.8 0.0 2e-30 105.4 0.0 1.1 1 0 0 1 1 1 1 Phage lysozyme DUF433 PF04255.14 ORF28071 - 0.11 12.4 0.1 6.6 6.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF433) DUF951 PF06107.11 ORF28071 - 0.39 10.7 3.2 0.31 11.0 0.9 1.9 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) Alpha-amylase PF00128.24 ORF26990 - 0.036 13.6 0.0 0.069 12.7 0.0 1.4 1 0 0 1 1 1 0 Alpha amylase, catalytic domain His_Phos_1 PF00300.22 ORF26313 - 0.0012 18.5 0.1 1.8 8.2 0.0 2.6 2 1 1 3 3 3 2 Histidine phosphatase superfamily (branch 1) DUF603 PF04645.12 ORF24834 - 0.019 14.6 0.2 0.027 14.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF603 DUF2809 PF10990.8 ORF24834 - 0.13 12.9 0.0 0.21 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2809) Carb_anhydrase PF00194.21 ORF24496 - 3.9e-07 29.9 0.3 3.9e-06 26.6 0.3 2.0 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Minor_capsid_3 PF12691.7 ORF2413 - 0.015 15.6 1.0 1.4 9.3 0.1 2.2 2 0 0 2 2 2 0 Minor capsid protein from bacteriophage Raco_middle PF17651.1 ORF16843 - 0.066 12.9 0.1 0.07 12.8 0.1 1.2 1 0 0 1 1 1 0 RACo middle region DUF2659 PF10858.8 ORF16384 - 0.046 13.4 0.7 0.067 12.8 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2659) DUF5069 PF16798.5 ORF16137 - 0.081 13.1 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5069) Optomotor-blind PF11078.8 ORF14493 - 0.046 14.3 1.1 2.7 8.6 0.1 2.2 2 0 0 2 2 2 0 Optomotor-blind protein N-terminal region His_Phos_1 PF00300.22 ORF1446 - 3.5e-08 33.4 0.0 2e-05 24.4 0.0 2.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) DivIC PF04977.15 ORF14241 - 0.0011 18.7 20.3 0.0046 16.7 5.2 2.6 1 1 1 2 2 2 2 Septum formation initiator DUF812 PF05667.11 ORF14241 - 0.0026 16.8 23.6 0.0033 16.4 23.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) DUF3450 PF11932.8 ORF14241 - 0.0085 15.4 8.4 0.0085 15.4 8.4 2.3 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) Bacillus_HBL PF05791.11 ORF14241 - 0.025 14.4 14.0 0.16 11.8 2.8 2.4 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) MetOD2 PF18548.1 ORF14241 - 0.13 12.3 19.3 3.6 7.8 6.1 3.3 3 1 0 3 3 3 0 Metanogen output domain 2 Atg14 PF10186.9 ORF14241 - 0.16 11.0 15.0 0.21 10.7 15.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5082 PF16888.5 ORF14241 - 0.19 12.0 25.3 0.36 11.1 6.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) Fib_alpha PF08702.10 ORF14241 - 0.43 10.8 21.9 0.058 13.6 8.9 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Wtap PF17098.5 ORF14241 - 0.67 9.9 19.4 2.6 8.0 6.2 2.5 1 1 1 2 2 2 0 WTAP/Mum2p family FlaC_arch PF05377.11 ORF14241 - 0.74 10.2 22.7 0.15 12.5 4.7 3.8 2 2 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF1192 PF06698.11 ORF14241 - 0.77 9.9 11.0 12 6.1 0.4 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1192) CENP-F_leu_zip PF10473.9 ORF14241 - 0.94 9.5 30.6 0.069 13.2 15.1 3.0 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SOGA PF11365.8 ORF14241 - 1.1 10.4 18.0 0.19 12.9 13.0 2.1 1 1 1 2 2 2 0 Protein SOGA TSC22 PF01166.18 ORF14241 - 1.4 9.3 15.2 0.66 10.3 3.2 3.2 2 2 2 4 4 4 0 TSC-22/dip/bun family SlyX PF04102.12 ORF14241 - 1.6 9.4 17.6 6.4 7.5 8.4 2.8 1 1 1 2 2 2 0 SlyX Spc7 PF08317.11 ORF14241 - 1.7 7.5 27.1 2.1 7.2 23.4 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein Cluap1 PF10234.9 ORF14241 - 2.9 7.2 23.0 4.7 6.5 6.1 2.1 1 1 1 2 2 2 0 Clusterin-associated protein-1 Tup_N PF08581.10 ORF14241 - 4 7.8 24.7 3.9 7.8 4.8 3.4 1 1 2 4 4 4 0 Tup N-terminal DUF4200 PF13863.6 ORF14241 - 4.2 7.8 28.0 26 5.2 9.4 2.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4200) DUF2203 PF09969.9 ORF14241 - 4.9 7.9 12.1 48 4.7 12.1 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Spc29 PF17082.5 ORF14241 - 5 6.9 18.3 44 3.8 15.2 2.6 1 1 0 2 2 2 0 Spindle Pole Component 29 TMF_DNA_bd PF12329.8 ORF14241 - 5.3 7.1 33.1 1.2 9.2 25.7 3.3 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding CorA PF01544.18 ORF14241 - 5.7 6.2 12.5 61 2.8 0.0 2.0 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF1664 PF07889.12 ORF14241 - 6.2 6.9 16.3 9 6.4 11.9 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Cnn_1N PF07989.11 ORF14241 - 6.6 7.0 23.5 4.2 7.6 5.8 2.6 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 bZIP_2 PF07716.15 ORF14241 - 8.1 6.6 19.8 7.1 6.8 3.8 2.9 2 1 0 2 2 2 0 Basic region leucine zipper TMPIT PF07851.13 ORF14241 - 9.1 5.4 19.0 5.1 6.2 16.1 1.7 1 1 0 2 2 2 0 TMPIT-like protein zf-CCCH PF00642.24 ORF111260 - 0.00034 20.5 1.5 0.00052 19.9 1.5 1.3 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) DUF4175 PF13779.6 ORF111260 - 0.0061 14.6 9.5 0.0072 14.3 9.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4175) MAT1 PF06391.13 ORF111260 - 0.15 11.9 12.4 0.22 11.3 12.4 1.2 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 zf-CCCH_4 PF18044.1 ORF111260 - 0.31 10.9 6.7 1.2 9.0 6.7 1.9 1 1 0 1 1 1 0 CCCH-type zinc finger DMRL_synthase PF00885.19 ORF111160 - 5.7e-50 168.8 0.1 6.6e-50 168.6 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase APAF1_C PF17908.1 ORF110022 - 0.005 16.8 0.6 0.0073 16.3 0.6 1.3 1 0 0 1 1 1 1 APAF-1 helical domain ApoLp-III PF07464.11 ORF110022 - 0.049 13.7 0.6 0.067 13.3 0.6 1.2 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) zf-LSD1 PF06943.12 ORF107057 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger DUF2237 PF09996.9 ORF106718 - 0.02 14.9 0.0 4.7 7.2 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2237) Aldo_ket_red PF00248.21 ORF106508 - 5e-18 65.3 0.0 5.9e-18 65.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family WD40 PF00400.32 ORF105122 - 7.3e-11 42.5 3.2 0.018 15.9 0.1 4.5 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF105122 - 0.00041 20.6 0.2 7.9 6.9 0.0 3.1 2 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain 2TM PF13239.6 ORF105060 - 0.2 12.0 12.4 0.048 14.0 7.1 2.1 1 1 1 2 2 2 0 2TM domain PLAC8 PF04749.17 ORF104388 - 2.3e-10 41.3 0.9 3.7e-10 40.7 0.9 1.3 1 0 0 1 1 1 1 PLAC8 family DUF4812 PF16071.5 ORF104388 - 0.084 12.7 0.1 0.62 9.9 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4812) SLBB PF10531.9 ORF101231 - 0.089 12.7 0.0 0.29 11.0 0.0 1.9 2 0 0 2 2 2 0 SLBB domain Ephrin_rec_like PF07699.13 ORF100623 - 0.0025 17.5 4.0 0.0025 17.5 4.0 1.8 2 0 0 2 2 2 1 Putative ephrin-receptor like TNFR_c6 PF00020.18 ORF100623 - 0.05 14.0 2.1 0.05 14.0 2.1 3.0 1 1 2 3 3 3 0 TNFR/NGFR cysteine-rich region NCD3G PF07562.14 ORF100623 - 2.1 8.4 11.3 0.11 12.5 4.9 2.2 2 1 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR MASE3 PF17159.4 NODE_39651_length_526_cov_163.804481_g32232_i0forward_frame_1 - 0.0082 15.8 3.0 0.011 15.4 3.0 1.2 1 0 0 1 1 1 1 Membrane-associated sensor domain SWIM PF04434.17 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_1 - 4.3e-05 23.1 39.2 0.21 11.3 1.7 5.4 5 0 0 5 5 5 5 SWIM zinc finger Orexin_rec2 PF03827.13 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_1 - 0.0032 17.4 0.1 30 4.7 0.0 4.4 3 2 2 5 5 5 2 Orexin receptor type 2 CVNH PF08881.10 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_1 - 5 7.9 8.3 35 5.2 0.1 3.8 1 1 3 4 4 4 0 CVNH domain Ribosomal_L37ae PF01780.19 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_1 - 1.6e-09 37.7 2.4 4.8 7.3 0.0 5.2 5 0 0 5 5 5 5 Ribosomal L37ae protein family DUF3796 PF12676.7 NODE_39615_length_527_cov_81.349593_g32197_i0forward_frame_1 - 0.05 14.0 1.2 0.081 13.4 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) zf-C2H2 PF00096.26 NODE_39612_length_527_cov_88.296748_g32195_i0reverse_frame_1 - 0.015 15.7 1.9 0.05 14.1 0.1 2.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type Kelch_5 PF13854.6 NODE_39603_length_527_cov_132.924797_g32187_i0reverse_frame_1 - 6.7e-10 38.7 0.0 0.0015 18.5 0.0 2.5 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 NODE_39603_length_527_cov_132.924797_g32187_i0reverse_frame_1 - 2.6e-09 37.2 0.9 0.0008 19.6 0.6 3.3 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_39603_length_527_cov_132.924797_g32187_i0reverse_frame_1 - 3.7e-08 33.4 1.4 0.017 15.4 0.6 3.1 3 1 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 NODE_39603_length_527_cov_132.924797_g32187_i0reverse_frame_1 - 3.3e-07 30.0 2.5 0.022 14.7 0.9 2.6 3 0 0 3 3 3 2 Kelch motif Kelch_1 PF01344.25 NODE_39603_length_527_cov_132.924797_g32187_i0reverse_frame_1 - 0.00012 21.5 0.0 0.024 14.2 0.0 2.9 3 0 0 3 3 3 1 Kelch motif RAG2 PF03089.14 NODE_39603_length_527_cov_132.924797_g32187_i0reverse_frame_1 - 0.014 14.4 1.8 0.088 11.8 0.0 2.5 1 1 0 2 2 2 0 Recombination activating protein 2 Kelch_4 PF13418.6 NODE_39603_length_527_cov_132.924797_g32187_i0reverse_frame_1 - 0.092 12.8 7.5 3.9 7.6 0.0 3.1 3 1 0 3 3 3 0 Galactose oxidase, central domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks119.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks119.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks119.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks119.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Choline_transpo PF04515.12 ORF89230 - 5.6e-52 177.0 29.9 5.6e-52 177.0 29.9 2.0 2 0 0 2 2 2 1 Plasma-membrane choline transporter PIG-P PF08510.12 ORF89230 - 0.63 10.0 0.0 0.63 10.0 0.0 3.1 3 1 1 4 4 4 0 PIG-P HEAT PF02985.22 ORF74186 - 0.11 12.8 0.1 4.4 7.8 0.0 2.9 2 0 0 2 2 2 0 HEAT repeat ATG16 PF08614.11 ORF60767 - 0.0042 17.3 22.4 0.0042 17.3 22.4 3.2 1 1 2 3 3 3 1 Autophagy protein 16 (ATG16) PKcGMP_CC PF16808.5 ORF60767 - 0.056 13.3 8.6 0.88 9.5 0.0 4.5 5 0 0 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF1759 PF03564.15 ORF60767 - 0.1 12.5 1.4 0.56 10.1 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) Fungal_TACC PF12709.7 ORF60767 - 0.67 10.4 7.6 2.4 8.7 0.6 3.5 3 0 0 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins zf-C4H2 PF10146.9 ORF60767 - 1.5 9.1 22.9 0.067 13.5 0.4 2.3 1 1 0 2 2 2 0 Zinc finger-containing protein DUF720 PF05302.11 ORF60767 - 2 8.3 8.7 0.22 11.4 2.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF720) GAS PF13851.6 ORF60767 - 6.9 6.0 39.7 0.014 14.8 3.6 3.8 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding Thioredoxin PF00085.20 ORF51629 - 3.3e-07 30.2 1.8 0.00039 20.3 0.2 2.4 2 0 0 2 2 2 2 Thioredoxin OST3_OST6 PF04756.13 ORF51629 - 0.00017 21.0 2.7 0.007 15.8 0.1 2.3 2 0 0 2 2 2 2 OST3 / OST6 family, transporter family DUF772 PF05598.11 ORF51629 - 0.021 14.9 0.0 0.061 13.3 0.0 1.9 1 0 0 1 1 1 0 Transposase domain (DUF772) Thioredoxin_7 PF13899.6 ORF51629 - 0.04 14.1 0.1 0.84 9.9 0.0 2.6 2 0 0 2 2 2 0 Thioredoxin-like Toxin-deaminase PF14424.6 ORF51629 - 0.064 13.4 1.0 2.1 8.4 0.0 2.7 2 0 0 2 2 2 0 The BURPS668_1122 family of deaminases Thioredoxin_2 PF13098.6 ORF51629 - 0.094 13.2 1.1 2 8.9 0.1 2.8 2 0 0 2 2 2 0 Thioredoxin-like domain DUF1722 PF08349.11 ORF51629 - 0.15 12.4 2.1 11 6.4 0.0 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF1722) DUF836 PF05768.14 ORF51629 - 0.9 10.0 3.9 14 6.2 0.2 3.2 3 0 0 3 3 3 0 Glutaredoxin-like domain (DUF836) Peptidase_C2 PF00648.21 ORF40729 - 2.3e-68 230.4 0.0 5.5e-68 229.2 0.0 1.5 2 0 0 2 2 2 1 Calpain family cysteine protease DUF1016_N PF17761.1 ORF40729 - 0.099 12.8 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 DUF1016 N-terminal domain XPG_I PF00867.18 ORF13246 - 3.6e-14 52.9 0.2 1.4e-13 51.0 0.2 2.0 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 ORF13246 - 0.00047 20.6 0.1 0.0012 19.2 0.1 1.7 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I_2 PF12813.7 ORF13246 - 0.03 13.8 1.6 0.067 12.7 0.1 2.0 2 0 0 2 2 2 0 XPG domain containing TDRP PF15683.5 ORF13246 - 0.18 11.7 10.0 0.02 14.9 4.6 2.1 2 0 0 2 2 2 0 Testis development-related protein Thioredoxin PF00085.20 ORF108902 - 3.3e-07 30.2 1.8 0.00039 20.3 0.2 2.4 2 0 0 2 2 2 2 Thioredoxin OST3_OST6 PF04756.13 ORF108902 - 0.00017 21.0 2.7 0.007 15.8 0.1 2.3 2 0 0 2 2 2 2 OST3 / OST6 family, transporter family DUF772 PF05598.11 ORF108902 - 0.021 14.9 0.0 0.061 13.3 0.0 1.9 1 0 0 1 1 1 0 Transposase domain (DUF772) Thioredoxin_7 PF13899.6 ORF108902 - 0.04 14.1 0.1 0.84 9.9 0.0 2.6 2 0 0 2 2 2 0 Thioredoxin-like Toxin-deaminase PF14424.6 ORF108902 - 0.064 13.4 1.0 2.1 8.4 0.0 2.7 2 0 0 2 2 2 0 The BURPS668_1122 family of deaminases Thioredoxin_2 PF13098.6 ORF108902 - 0.094 13.2 1.1 2 8.9 0.1 2.8 2 0 0 2 2 2 0 Thioredoxin-like domain DUF1722 PF08349.11 ORF108902 - 0.15 12.4 2.1 11 6.4 0.0 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF1722) DUF836 PF05768.14 ORF108902 - 0.9 10.0 3.9 14 6.2 0.2 3.2 3 0 0 3 3 3 0 Glutaredoxin-like domain (DUF836) WXG100 PF06013.12 ORF97870 - 0.021 15.1 2.0 4.1 7.7 0.0 3.6 3 1 1 4 4 4 0 Proteins of 100 residues with WXG Apolipoprotein PF01442.18 ORF97870 - 0.088 12.7 0.0 2.2 8.1 0.0 2.6 2 1 1 3 3 3 0 Apolipoprotein A1/A4/E domain Pkinase PF00069.25 ORF92412 - 1e-63 215.2 0.0 1.6e-63 214.6 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92412 - 7.5e-27 94.2 0.0 1.2e-26 93.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF92412 - 1.2e-15 57.7 0.0 8.8e-07 29.3 0.0 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF92412 - 6.5e-14 50.6 1.3 0.00025 20.7 0.0 4.4 4 0 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF92412 - 2.2e-11 42.4 0.2 0.00068 19.0 0.0 4.3 4 0 0 4 4 4 2 EF hand EF-hand_5 PF13202.6 ORF92412 - 1.2e-09 37.3 1.2 0.00028 20.3 0.0 3.5 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF92412 - 3.4e-08 33.2 2.0 0.00025 20.8 0.0 4.0 2 1 2 4 4 4 3 EF-hand domain pair Kdo PF06293.14 ORF92412 - 0.00024 20.5 0.2 0.00046 19.6 0.2 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF92412 - 0.0031 17.5 0.5 0.017 15.0 0.0 2.3 2 1 0 2 2 2 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF92412 - 0.022 14.1 0.1 0.05 12.9 0.1 1.5 1 1 0 1 1 1 0 Kinase-like YrbL-PhoP_reg PF10707.9 ORF92412 - 0.11 12.0 0.0 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL CDC48_2 PF02933.17 ORF59028 - 0.0064 16.3 0.0 0.81 9.5 0.0 2.6 2 0 0 2 2 2 2 Cell division protein 48 (CDC48), domain 2 Acetyltransf_11 PF13720.6 ORF59028 - 0.26 11.8 1.2 11 6.6 0.1 3.0 2 1 1 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Pox_RNA_Pol_19 PF05320.12 ORF59028 - 4.5 7.2 13.3 1 9.4 2.2 2.9 2 0 0 2 2 2 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit TPR_19 PF14559.6 ORF57820 - 4e-14 52.9 3.4 0.021 15.3 0.0 6.7 6 1 1 7 7 7 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF57820 - 1.1e-11 44.8 36.0 0.00014 22.0 6.6 5.7 4 1 1 6 6 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 ORF57820 - 3e-06 26.9 26.0 0.4 10.9 0.0 8.4 10 0 0 10 10 9 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF57820 - 6.1e-05 23.6 0.2 0.32 11.7 0.0 4.0 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF57820 - 0.00023 21.7 0.4 10 7.2 0.0 5.6 7 0 0 7 7 6 1 Tetratricopeptide repeat PPR_2 PF13041.6 ORF57820 - 0.001 19.2 3.5 0.46 10.7 0.0 4.3 4 0 0 4 4 4 1 PPR repeat family TPR_7 PF13176.6 ORF57820 - 0.0014 18.5 3.3 0.91 9.7 0.1 4.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF57820 - 0.0025 18.3 7.8 0.29 11.9 0.0 5.8 7 0 0 7 7 6 1 Tetratricopeptide repeat PPR PF01535.20 ORF57820 - 0.012 15.8 5.4 25 5.4 0.1 5.3 5 0 0 5 5 5 0 PPR repeat DUF3768 PF12599.8 ORF57820 - 0.14 12.2 0.1 0.61 10.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3768) TPR_1 PF00515.28 ORF57820 - 0.29 11.0 0.0 0.29 11.0 0.0 6.3 8 0 0 8 8 8 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF57820 - 2 8.5 10.4 8.6 6.5 0.1 4.8 5 0 0 5 5 5 0 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 ORF57820 - 3 8.2 12.9 7 7.0 0.2 5.1 4 1 2 6 6 6 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF57820 - 3.8 8.0 14.3 0.59 10.5 0.1 5.0 5 0 0 5 5 4 0 Tetratricopeptide repeat Pkinase PF00069.25 ORF45851 - 2.1e-57 194.5 0.0 2.8e-57 194.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45851 - 3.6e-36 124.8 0.2 5.1e-36 124.3 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF45851 - 5.1e-12 44.4 0.0 1.2e-06 27.6 0.0 4.0 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF45851 - 5.3e-11 42.8 0.1 3.5e-08 33.8 0.0 3.5 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF45851 - 1.5e-10 40.1 3.1 1.4e-06 27.7 0.0 4.6 5 0 0 5 5 5 2 EF-hand domain EF-hand_5 PF13202.6 ORF45851 - 4.9e-08 32.1 0.5 1.8e-07 30.4 0.1 2.3 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF45851 - 4.1e-07 29.7 0.4 0.029 14.2 0.1 4.1 3 1 1 4 4 4 2 EF-hand domain pair CaATP_NAI PF12515.8 ORF45851 - 0.0014 18.2 0.2 0.0032 17.0 0.2 1.5 1 0 0 1 1 1 1 Ca2+-ATPase N terminal autoinhibitory domain APH PF01636.23 ORF45851 - 0.0041 17.1 0.1 0.26 11.2 0.0 2.4 1 1 0 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF45851 - 0.0092 14.8 0.0 0.019 13.8 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase Integrase_Zn PF02022.19 ORF45851 - 0.081 12.9 0.3 0.21 11.6 0.0 1.9 2 0 0 2 2 2 0 Integrase Zinc binding domain Cpn60_TCP1 PF00118.24 ORF31180 - 6.3e-154 513.2 8.6 7.2e-154 513.0 8.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family MscS_porin PF12795.7 ORF31180 - 0.14 11.6 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 Mechanosensitive ion channel porin domain Bombinin PF05298.11 ORF28773 - 0.056 13.1 0.1 5.2 6.7 0.0 2.6 2 0 0 2 2 2 0 Bombinin DsrD PF08679.11 ORF28773 - 9.2 6.6 8.2 43 4.5 0.2 3.8 3 0 0 3 3 3 0 Dissimilatory sulfite reductase D (DsrD) TPR_19 PF14559.6 ORF19128 - 4e-14 52.9 3.4 0.021 15.3 0.0 6.7 6 1 1 7 7 7 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF19128 - 1.1e-11 44.8 36.0 0.00014 22.0 6.6 5.7 4 1 1 6 6 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 ORF19128 - 3e-06 26.9 26.0 0.4 10.9 0.0 8.4 10 0 0 10 10 9 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF19128 - 6.1e-05 23.6 0.2 0.32 11.7 0.0 4.0 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF19128 - 0.00023 21.7 0.4 10 7.2 0.0 5.6 7 0 0 7 7 6 1 Tetratricopeptide repeat PPR_2 PF13041.6 ORF19128 - 0.001 19.2 3.5 0.46 10.7 0.0 4.3 4 0 0 4 4 4 1 PPR repeat family TPR_7 PF13176.6 ORF19128 - 0.0014 18.5 3.3 0.91 9.7 0.1 4.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF19128 - 0.0025 18.3 7.8 0.29 11.9 0.0 5.8 7 0 0 7 7 6 1 Tetratricopeptide repeat PPR PF01535.20 ORF19128 - 0.012 15.8 5.4 25 5.4 0.1 5.3 5 0 0 5 5 5 0 PPR repeat DUF3768 PF12599.8 ORF19128 - 0.14 12.2 0.1 0.61 10.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3768) TPR_1 PF00515.28 ORF19128 - 0.29 11.0 0.0 0.29 11.0 0.0 6.3 8 0 0 8 8 8 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF19128 - 2 8.5 10.4 8.6 6.5 0.1 4.8 5 0 0 5 5 5 0 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 ORF19128 - 3 8.2 12.9 7 7.0 0.2 5.1 4 1 2 6 6 6 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF19128 - 3.8 8.0 14.3 0.59 10.5 0.1 5.0 5 0 0 5 5 4 0 Tetratricopeptide repeat ABC_tran PF00005.27 ORF15627 - 3e-29 102.3 0.0 6.4e-29 101.2 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF15627 - 2.4e-21 76.6 10.9 3.1e-21 76.2 10.9 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF15627 - 3.1e-06 26.8 1.4 0.00022 20.8 0.3 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF15627 - 0.0025 17.9 0.2 0.0062 16.6 0.2 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase MeaB PF03308.16 ORF15627 - 0.021 13.8 0.0 0.036 13.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 ORF15627 - 0.022 14.5 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF15627 - 0.033 13.9 0.0 0.08 12.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 ORF15627 - 0.039 14.5 0.0 0.12 13.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF15627 - 0.04 14.0 0.1 0.091 12.8 0.1 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_23 PF13476.6 ORF15627 - 0.072 13.6 0.1 0.19 12.2 0.1 1.6 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF15627 - 0.12 12.1 0.1 1.2 8.8 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein NTPase_1 PF03266.15 ORF15627 - 0.16 11.9 0.8 0.49 10.3 0.1 2.1 2 0 0 2 2 2 0 NTPase DNA_pol_A_exo1 PF01612.20 ORF106253 - 1.1e-15 57.8 0.0 1.6e-14 54.0 0.0 2.7 2 1 0 2 2 2 1 3'-5' exonuclease WHEP-TRS PF00458.20 ORF106253 - 4e-12 46.1 0.0 1.2e-11 44.6 0.0 1.8 1 0 0 1 1 1 1 WHEP-TRS domain Collagen_mid PF15984.5 ORF95023 - 8.1e-05 22.5 17.3 0.0072 16.1 6.2 2.9 1 1 2 3 3 3 3 Bacterial collagen, middle region Spo0A_C PF08769.11 ORF95023 - 0.072 13.2 0.6 0.28 11.3 0.2 2.2 2 0 0 2 2 2 0 Sporulation initiation factor Spo0A C terminal ATP-synt_B PF00430.18 ORF95023 - 0.17 11.9 1.3 0.85 9.7 0.5 2.6 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) FAM176 PF14851.6 ORF95023 - 0.38 10.4 2.9 0.32 10.7 0.2 2.3 2 0 0 2 2 2 0 FAM176 family ARGLU PF15346.6 ORF95023 - 1.9 8.4 9.0 0.19 11.6 2.0 2.6 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 DUF4726 PF15855.5 ORF93681 - 0.062 13.5 0.3 6.1 7.1 0.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4726) Cpn60_TCP1 PF00118.24 ORF8595 - 2.1e-151 504.9 11.5 2.3e-151 504.8 11.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GlcNAc-1_reg PF18440.1 ORF8595 - 0.093 13.0 2.0 0.72 10.1 0.1 3.0 3 0 0 3 3 3 0 Putative GlcNAc-1 phosphotransferase regulatory domain Yip1 PF04893.17 ORF82346 - 0.015 15.1 0.5 0.015 15.1 0.5 1.8 2 0 0 2 2 2 0 Yip1 domain HhH-GPD PF00730.25 ORF82346 - 0.061 13.8 0.0 0.13 12.8 0.0 1.4 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein DUF1488 PF07369.11 ORF82346 - 0.11 12.5 0.0 0.4 10.7 0.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1488) NYD-SP28 PF14772.6 ORF80033 - 4.8e-13 49.0 11.8 4.8e-13 49.0 11.8 5.0 2 1 3 5 5 5 1 Sperm tail NYD-SP28_assoc PF14775.6 ORF80033 - 8.9e-07 28.9 0.3 8.9e-07 28.9 0.3 3.8 3 1 2 5 5 5 1 Sperm tail C-terminal domain HALZ PF02183.18 ORF80033 - 0.024 14.9 5.6 0.5 10.6 0.3 3.2 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF948 PF06103.11 ORF80033 - 0.16 12.3 0.1 0.16 12.3 0.1 3.4 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) Baculo_PEP_C PF04513.12 ORF80033 - 1.1 9.3 7.9 1.1 9.3 0.2 3.4 2 2 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus NABP PF07990.12 ORF80033 - 1.3 8.5 3.9 3 7.3 3.9 1.6 1 0 0 1 1 1 0 Nucleic acid binding protein NABP YtxH PF12732.7 ORF80033 - 10 6.8 9.0 24 5.5 2.9 3.7 2 2 0 2 2 2 0 YtxH-like protein Ion_trans PF00520.31 ORF77672 - 1.9e-20 73.1 6.0 2.8e-20 72.6 6.0 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF77672 - 1.6e-09 37.6 0.7 4.8e-09 36.0 0.7 1.8 1 0 0 1 1 1 1 Ion channel RRM_1 PF00076.22 ORF58784 - 7.4e-28 96.2 4.6 3.8e-15 55.5 0.7 2.9 2 1 1 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF58784 - 1.4e-07 31.5 0.4 0.00035 20.6 0.1 2.9 2 1 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 ORF58784 - 0.07 13.2 0.2 9.8 6.3 0.0 2.4 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif Collagen_mid PF15984.5 ORF47054 - 8.1e-05 22.5 17.3 0.0072 16.1 6.2 2.9 1 1 2 3 3 3 3 Bacterial collagen, middle region Spo0A_C PF08769.11 ORF47054 - 0.072 13.2 0.6 0.28 11.3 0.2 2.2 2 0 0 2 2 2 0 Sporulation initiation factor Spo0A C terminal ATP-synt_B PF00430.18 ORF47054 - 0.17 11.9 1.3 0.85 9.7 0.5 2.6 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) FAM176 PF14851.6 ORF47054 - 0.38 10.4 2.9 0.32 10.7 0.2 2.3 2 0 0 2 2 2 0 FAM176 family ARGLU PF15346.6 ORF47054 - 1.9 8.4 9.0 0.19 11.6 2.0 2.6 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 Ion_trans PF00520.31 ORF46192 - 0.0001 21.6 10.9 0.00043 19.6 0.3 3.1 3 1 0 3 3 3 2 Ion transport protein BCD PF15461.6 ORF46192 - 0.018 14.5 5.7 0.045 13.2 5.7 1.6 1 1 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase GRIP PF01465.20 ORF29055 - 6.9e-08 32.3 0.3 2e-07 30.8 0.3 1.9 1 0 0 1 1 1 1 GRIP domain FAM76 PF16046.5 ORF29055 - 0.0012 18.3 24.3 0.0012 18.3 24.3 4.2 1 1 2 4 4 4 1 FAM76 protein Fzo_mitofusin PF04799.13 ORF29055 - 0.046 13.3 0.5 0.046 13.3 0.5 5.7 5 1 2 7 7 7 0 fzo-like conserved region TolA_bind_tri PF16331.5 ORF29055 - 1.1 9.4 28.9 3 8.0 3.7 4.7 4 1 0 4 4 4 0 TolA binding protein trimerisation PspA_IM30 PF04012.12 ORF29055 - 1.6 8.3 42.4 0.37 10.3 13.0 5.6 3 1 2 6 6 6 0 PspA/IM30 family DUF4407 PF14362.6 ORF29055 - 4.8 6.4 39.0 1.5 8.1 17.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) Ion_trans PF00520.31 ORF24480 - 0.00015 21.0 11.6 0.00043 19.6 0.3 3.1 3 1 0 3 3 3 2 Ion transport protein Cpn60_TCP1 PF00118.24 ORF20912 - 2.1e-151 504.9 11.5 2.3e-151 504.8 11.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GlcNAc-1_reg PF18440.1 ORF20912 - 0.093 13.0 2.0 0.72 10.1 0.1 3.0 3 0 0 3 3 3 0 Putative GlcNAc-1 phosphotransferase regulatory domain MA3 PF02847.17 ORF20809 - 3.1e-23 81.9 0.4 9.5e-23 80.3 0.4 1.9 1 0 0 1 1 1 1 MA3 domain MIF4G PF02854.19 ORF20809 - 1.6e-14 54.1 0.4 5e-14 52.4 0.3 2.0 2 0 0 2 2 2 1 MIF4G domain Mo-nitro_C PF06967.11 ORF20809 - 0.1 12.6 0.1 0.24 11.4 0.1 1.6 1 0 0 1 1 1 0 Mo-dependent nitrogenase C-terminus FAM176 PF14851.6 ORF20809 - 0.27 10.9 6.1 1.3 8.7 1.5 2.4 2 0 0 2 2 2 0 FAM176 family DUF445 PF04286.12 ORF20809 - 0.39 10.5 9.4 6.1 6.6 3.2 3.4 1 1 1 2 2 2 0 Protein of unknown function (DUF445) Lin-8 PF03353.15 ORF20809 - 0.57 9.7 6.3 6.5 6.2 3.2 2.5 2 1 0 2 2 2 0 Ras-mediated vulval-induction antagonist DUF2202 PF09968.9 NODE_5555_length_1677_cov_83.811206_g3999_i0reverse_frame_1 - 0.0061 16.4 2.5 0.015 15.2 1.6 2.1 2 0 0 2 2 2 1 Uncharacterized protein domain (DUF2202) SR-25 PF10500.9 ORF6710 - 0.003 17.2 6.4 0.0047 16.6 6.4 1.2 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein CDK2AP PF09806.9 ORF6710 - 0.42 10.6 9.2 0.74 9.8 9.2 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein ATG16 PF08614.11 ORF66337 - 1.9e-07 31.5 93.2 0.0042 17.3 34.9 5.1 1 1 4 5 5 5 4 Autophagy protein 16 (ATG16) TPR_MLP1_2 PF07926.12 ORF66337 - 4.8e-06 26.7 93.1 0.041 13.9 24.3 6.5 1 1 6 7 7 7 5 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 ORF66337 - 3.8e-05 22.7 92.3 0.023 13.6 25.1 4.4 1 1 3 4 4 4 4 Spc7 kinetochore protein OmpH PF03938.14 ORF66337 - 0.0011 19.3 85.9 0.011 16.1 3.9 5.6 1 1 4 6 6 6 3 Outer membrane protein (OmpH-like) WEMBL PF05701.11 ORF66337 - 0.0019 17.0 52.3 0.0019 17.0 52.3 3.0 1 1 2 3 3 3 1 Weak chloroplast movement under blue light DUF724 PF05266.14 ORF66337 - 0.0027 17.6 15.8 0.0027 17.6 15.8 5.4 1 1 4 5 5 4 1 Protein of unknown function (DUF724) DUF3584 PF12128.8 ORF66337 - 0.0034 15.0 80.0 0.057 10.9 57.6 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF3584) Fez1 PF06818.15 ORF66337 - 0.0064 17.0 29.2 0.0064 17.0 29.2 4.6 1 1 3 4 4 4 2 Fez1 DUF4201 PF13870.6 ORF66337 - 0.011 15.5 19.3 0.011 15.5 19.3 5.3 1 1 3 4 4 4 0 Domain of unknown function (DUF4201) Myosin_tail_1 PF01576.19 ORF66337 - 0.014 13.2 92.6 0.0066 14.3 47.5 2.7 1 1 2 3 3 3 0 Myosin tail Baculo_PEP_C PF04513.12 ORF66337 - 0.014 15.4 3.0 0.014 15.4 3.0 5.6 1 1 6 7 7 7 0 Baculovirus polyhedron envelope protein, PEP, C terminus APG6_N PF17675.1 ORF66337 - 0.017 15.6 27.9 0.017 15.6 27.9 5.9 1 1 3 4 4 3 0 Apg6 coiled-coil region DHR10 PF18595.1 ORF66337 - 0.034 14.2 89.4 0.03 14.4 16.8 6.7 1 1 8 9 9 9 0 Designed helical repeat protein 10 domain GAS2 PF02187.17 ORF66337 - 0.1 12.7 0.0 0.31 11.2 0.0 1.9 1 0 0 1 1 1 0 Growth-Arrest-Specific Protein 2 Domain DUF745 PF05335.13 ORF66337 - 0.21 11.3 65.0 0.021 14.5 12.9 4.2 3 1 1 4 4 4 0 Protein of unknown function (DUF745) MscS_porin PF12795.7 ORF66337 - 0.53 9.8 74.3 0.16 11.5 19.5 4.7 1 1 3 4 4 4 0 Mechanosensitive ion channel porin domain Laminin_II PF06009.12 ORF66337 - 0.84 9.7 70.7 0.41 10.7 12.7 6.3 2 1 4 6 6 6 0 Laminin Domain II Vac_Fusion PF02346.16 ORF66337 - 1 9.1 10.9 1.3 8.7 0.2 4.8 4 1 1 5 5 5 0 Chordopoxvirus multifunctional envelope protein A27 HOOK PF05622.12 ORF66337 - 1 7.4 87.3 0.35 9.0 31.2 3.9 1 1 2 3 3 3 0 HOOK protein IFT57 PF10498.9 ORF66337 - 1.3 8.0 79.7 0.12 11.3 18.3 4.7 1 1 3 4 4 4 0 Intra-flagellar transport protein 57 BRE1 PF08647.11 ORF66337 - 1.6 8.8 97.9 0.057 13.5 13.2 7.0 2 1 4 7 7 6 0 BRE1 E3 ubiquitin ligase Filament PF00038.21 ORF66337 - 2.3 7.7 77.2 0.054 13.1 14.2 4.9 1 1 4 5 5 5 0 Intermediate filament protein DUF4407 PF14362.6 ORF66337 - 2.9 7.1 68.4 0.73 9.1 19.9 4.1 1 1 2 3 3 2 0 Domain of unknown function (DUF4407) UPF0242 PF06785.11 ORF66337 - 3.1 7.9 88.9 9 6.3 27.7 4.6 1 1 3 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus Exonuc_VII_L PF02601.15 ORF66337 - 3.6 7.1 62.3 0.32 10.5 21.7 3.3 1 1 2 3 3 3 0 Exonuclease VII, large subunit Cast PF10174.9 ORF66337 - 4.1 5.5 85.3 6.6 4.8 53.8 3.6 1 1 2 3 3 3 0 RIM-binding protein of the cytomatrix active zone Sugarporin_N PF11471.8 ORF66337 - 6.7 6.8 16.6 0.1 12.6 3.7 4.2 3 2 0 4 4 4 0 Maltoporin periplasmic N-terminal extension Molybdopterin PF00384.22 ORF29128 - 6.9e-89 298.8 0.1 1.1e-88 298.2 0.1 1.3 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 ORF29128 - 1.8e-26 92.4 0.0 3.7e-26 91.3 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain TPP_enzyme_M PF00205.22 ORF29128 - 0.096 12.4 0.4 8.1 6.2 0.0 2.4 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain SR-25 PF10500.9 ORF22369 - 0.003 17.2 6.4 0.0047 16.6 6.4 1.2 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein CDK2AP PF09806.9 ORF22369 - 0.42 10.6 9.2 0.74 9.8 9.2 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein KH_1 PF00013.29 ORF16421 - 1e-14 54.1 0.1 1.9e-12 46.9 0.0 2.3 2 0 0 2 2 2 2 KH domain WW PF00397.26 ORF16421 - 9.4e-14 51.2 5.2 4.9e-06 26.5 0.3 2.5 2 0 0 2 2 2 2 WW domain PQQ PF01011.21 ORF16421 - 6.1e-06 25.9 0.0 0.2 11.6 0.0 2.5 2 0 0 2 2 2 2 PQQ enzyme repeat Glyco_hyd_101C PF17451.2 ORF16421 - 0.035 14.4 0.4 9 6.6 0.0 2.5 2 0 0 2 2 2 0 Glycosyl hydrolase 101 beta sandwich domain KH_2 PF07650.17 ORF16421 - 0.062 13.1 0.1 0.13 12.1 0.1 1.5 1 0 0 1 1 1 0 KH domain Xpo1 PF08389.12 ORF70443 - 0.0046 17.0 6.5 0.18 11.9 0.1 3.3 1 1 1 3 3 3 2 Exportin 1-like protein SSF PF00474.17 ORF70443 - 0.033 13.1 0.1 0.046 12.6 0.1 1.2 1 0 0 1 1 1 0 Sodium:solute symporter family PRP1_N PF06424.12 ORF70443 - 0.11 12.9 4.8 0.24 11.8 4.8 1.6 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal BUD22 PF09073.10 ORF70443 - 0.23 10.8 6.7 0.053 12.9 3.6 1.4 2 0 0 2 2 2 0 BUD22 Cwf_Cwc_15 PF04889.12 ORF70443 - 0.33 10.6 9.8 0.6 9.8 9.8 1.3 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein V-ATPase_H_C PF11698.8 ORF70443 - 0.78 9.9 6.5 0.73 10.0 0.1 3.5 3 1 1 4 4 4 0 V-ATPase subunit H SURF2 PF05477.11 ORF70443 - 1.2 8.7 6.5 2.4 7.8 6.5 1.4 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) OST-HTH PF12872.7 ORF69881 - 0.034 13.9 0.0 0.09 12.6 0.0 1.7 1 0 0 1 1 1 0 OST-HTH/LOTUS domain Xpo1 PF08389.12 ORF55958 - 0.0046 17.0 6.5 0.18 11.9 0.1 3.3 1 1 1 3 3 3 2 Exportin 1-like protein SSF PF00474.17 ORF55958 - 0.033 13.1 0.1 0.046 12.6 0.1 1.2 1 0 0 1 1 1 0 Sodium:solute symporter family PRP1_N PF06424.12 ORF55958 - 0.11 12.9 4.8 0.24 11.8 4.8 1.6 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal BUD22 PF09073.10 ORF55958 - 0.23 10.8 6.7 0.053 12.9 3.6 1.4 2 0 0 2 2 2 0 BUD22 Cwf_Cwc_15 PF04889.12 ORF55958 - 0.33 10.6 9.8 0.6 9.8 9.8 1.3 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein V-ATPase_H_C PF11698.8 ORF55958 - 0.78 9.9 6.5 0.73 10.0 0.1 3.5 3 1 1 4 4 4 0 V-ATPase subunit H SURF2 PF05477.11 ORF55958 - 1.2 8.7 6.5 2.4 7.8 6.5 1.4 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) Peptidase_S10 PF00450.22 ORF44917 - 1.3e-71 242.3 6.2 1.3e-71 242.3 6.2 2.1 1 1 1 2 2 2 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF44917 - 6.6e-05 23.2 17.7 0.0002 21.7 17.7 1.8 1 1 0 1 1 1 1 EGF-like domain EGF_Tenascin PF18720.1 ORF44917 - 0.006 16.6 2.8 0.015 15.4 2.8 1.7 1 0 0 1 1 1 1 Tenascin EGF domain Ephrin_rec_like PF07699.13 ORF24551 - 0.00088 19.0 1.7 0.0029 17.3 1.7 1.9 1 0 0 1 1 1 1 Putative ephrin-receptor like NCD3G PF07562.14 ORF24551 - 0.75 9.8 8.8 0.67 10.0 0.8 2.6 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR MSC PF09402.10 ORF24551 - 9.2 5.6 7.6 18 4.7 7.6 1.5 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain TPR_MalT PF17874.1 ORF10758 - 8.7e-05 22.0 9.5 0.0017 17.8 1.5 2.4 1 1 1 2 2 2 2 MalT-like TPR region TPR_1 PF00515.28 ORF10758 - 0.00048 19.8 3.4 0.51 10.3 0.1 4.1 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF10758 - 0.0011 19.2 10.5 0.13 12.6 1.5 3.8 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF10758 - 0.0025 17.8 6.0 1.3 9.3 0.3 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat NARP1 PF12569.8 ORF10758 - 0.034 13.1 0.1 0.37 9.7 0.0 2.0 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 TPR_8 PF13181.6 ORF10758 - 0.083 13.1 3.0 0.12 12.7 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF10758 - 0.23 11.4 4.6 1.3 9.0 0.4 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Sulfatase PF00884.23 ORF99465 - 4.5e-54 183.9 0.2 5.8e-54 183.6 0.2 1.1 1 0 0 1 1 1 1 Sulfatase EptA_B_N PF08019.12 ORF99465 - 5.8e-43 146.4 9.5 5.8e-43 146.4 9.5 1.8 2 0 0 2 2 2 1 Phosphoethanolamine transferase EptA/EptB Phosphodiest PF01663.22 ORF99465 - 0.17 11.4 0.0 0.3 10.6 0.0 1.4 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase Rhomboid PF01694.22 ORF99465 - 0.33 10.9 6.0 0.65 10.0 6.0 1.5 1 0 0 1 1 1 0 Rhomboid family PDZ_6 PF17820.1 ORF94424 - 0.012 15.4 3.6 1.4 8.8 0.1 3.5 4 1 0 4 4 4 0 PDZ domain PDZ PF00595.24 ORF94424 - 0.15 12.4 0.1 34 4.9 0.0 2.7 2 1 0 2 2 2 0 PDZ domain VRR_NUC PF08774.11 ORF57777 - 5.9e-14 52.1 0.0 1.9e-13 50.4 0.0 1.9 1 0 0 1 1 1 1 VRR-NUC domain PP2C PF00481.21 ORF39949 - 1e-27 97.5 0.0 3e-27 95.9 0.0 1.7 1 1 1 2 2 2 1 Protein phosphatase 2C Pkinase PF00069.25 ORF39949 - 2.4e-19 69.8 0.0 3.7e-19 69.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39949 - 3e-12 46.4 0.0 5.1e-12 45.6 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PP2C_2 PF13672.6 ORF39949 - 6.9e-05 22.6 0.1 0.00012 21.7 0.1 1.5 1 1 0 1 1 1 1 Protein phosphatase 2C Pkinase_fungal PF17667.1 ORF39949 - 0.00036 19.4 0.0 0.00055 18.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF39949 - 0.0033 16.8 0.1 0.0056 16.1 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF39949 - 0.0083 16.1 0.1 0.022 14.7 0.1 1.7 1 0 0 1 1 1 1 Phosphotransferase enzyme family XPG_I PF00867.18 ORF25002 - 4.1e-14 52.7 0.2 1.3e-13 51.0 0.2 1.9 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 ORF25002 - 0.00047 20.6 0.1 0.0012 19.2 0.1 1.7 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I_2 PF12813.7 ORF25002 - 0.029 13.8 0.1 0.066 12.7 0.1 1.6 1 0 0 1 1 1 0 XPG domain containing TDRP PF15683.5 ORF25002 - 0.44 10.5 9.1 0.049 13.6 3.7 2.1 2 0 0 2 2 2 0 Testis development-related protein DUF4140 PF13600.6 ORF13452 - 0.033 14.6 0.1 5.4 7.5 0.1 2.4 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF2934 PF11154.8 ORF13452 - 1.6 8.4 5.2 9.3 6.0 5.2 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2934) AAA_22 PF13401.6 ORF90971 - 0.015 15.5 0.0 0.04 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain Pkinase PF00069.25 ORF741 - 3.1e-37 128.4 0.0 2.1e-36 125.7 0.0 1.9 1 1 1 2 2 2 1 Protein kinase domain cNMP_binding PF00027.29 ORF741 - 6.7e-18 64.6 0.1 2.7e-13 49.8 0.1 3.6 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain Pkinase_Tyr PF07714.17 ORF741 - 1e-15 57.7 0.0 4.2e-15 55.7 0.0 1.8 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF741 - 1.8e-07 30.8 0.0 2.6e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF741 - 0.0005 20.1 0.0 0.00099 19.1 0.0 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF741 - 0.0012 17.7 0.0 0.0019 17.1 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Chloroa_b-bind PF00504.21 ORF72018 - 7.9e-85 283.3 0.2 7.4e-33 114.4 0.0 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein EF-hand_7 PF13499.6 ORF65233 - 7.1e-09 36.0 11.0 1.6e-06 28.5 3.9 4.1 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF65233 - 8.3e-07 28.2 2.8 0.0001 21.7 0.4 4.1 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF65233 - 1.8e-06 27.4 14.5 0.0033 17.2 0.9 6.3 6 1 1 7 7 7 3 EF-hand domain EF-hand_1 PF00036.32 ORF65233 - 1.4e-05 24.3 20.7 0.00059 19.2 1.0 5.7 5 1 1 6 6 6 3 EF hand EF-hand_8 PF13833.6 ORF65233 - 0.00029 20.6 13.8 0.00039 20.2 3.6 4.1 3 1 2 5 5 5 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF65233 - 0.15 12.0 9.3 0.42 10.6 0.5 3.5 1 1 2 3 3 3 0 Cytoskeletal-regulatory complex EF hand RST PF12174.8 ORF65233 - 0.62 10.0 7.8 1.7 8.6 0.1 4.0 4 0 0 4 4 4 0 RCD1-SRO-TAF4 (RST) plant domain Ion_trans PF00520.31 ORF5054 - 3.9e-21 75.4 14.8 3.9e-21 75.4 14.8 1.4 2 0 0 2 2 2 1 Ion transport protein EF-hand_1 PF00036.32 ORF5054 - 5.9e-11 41.1 0.4 4.5e-05 22.7 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF5054 - 3e-08 34.0 0.1 9.1e-08 32.4 0.1 1.9 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF5054 - 4.2e-08 32.5 0.2 0.02 14.8 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF5054 - 6.9e-08 31.6 0.3 0.00026 20.3 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF5054 - 1.5e-05 24.8 0.0 0.015 15.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF5054 - 0.0051 17.1 0.1 0.027 14.8 0.1 2.2 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Acyl_transf_3 PF01757.22 ORF43061 - 1.4e-17 63.8 44.6 1.4e-17 63.8 44.6 1.8 2 0 0 2 2 2 1 Acyltransferase family Acyl_transf_3 PF01757.22 ORF22519 - 1.3e-17 63.9 44.7 1.3e-17 63.9 44.7 1.8 2 0 0 2 2 2 1 Acyltransferase family YkuD PF03734.14 ORF13163 - 3.7e-31 108.5 0.1 5.9e-31 107.9 0.1 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain PG_binding_1 PF01471.18 ORF13163 - 1.1e-09 38.4 0.3 6e-07 29.6 0.0 3.3 3 0 0 3 3 3 2 Putative peptidoglycan binding domain Chloroa_b-bind PF00504.21 ORF111283 - 9e-85 283.1 0.2 7.4e-33 114.4 0.0 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein HD_4 PF13328.6 ORF110818 - 5.1e-42 143.2 0.7 1.1e-41 142.2 0.1 1.9 2 0 0 2 2 2 1 HD domain RelA_SpoT PF04607.17 ORF110818 - 7.5e-27 93.9 0.0 1.6e-26 92.9 0.0 1.6 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins TGS PF02824.21 ORF110818 - 1.7e-13 50.4 0.0 3.6e-13 49.3 0.0 1.6 1 0 0 1 1 1 1 TGS domain HD PF01966.22 ORF110818 - 4.2e-09 36.7 0.2 1.1e-07 32.0 0.1 3.3 3 1 0 3 3 3 1 HD domain Thioredoxin PF00085.20 ORF109181 - 7.5e-49 164.0 0.0 7.6e-16 58.0 0.0 3.2 3 0 0 3 3 3 3 Thioredoxin TraF PF13728.6 ORF109181 - 2e-10 40.9 0.1 0.001 18.9 0.1 3.4 3 0 0 3 3 3 3 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF109181 - 1e-07 32.1 0.4 0.055 13.8 0.0 4.7 4 2 2 6 6 6 2 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF109181 - 2.5e-07 31.1 3.3 0.16 12.4 0.0 4.4 4 1 0 4 4 4 3 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF109181 - 5.6e-07 29.6 0.6 0.25 11.5 0.0 4.0 4 1 0 4 4 4 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF109181 - 9.2e-07 28.5 0.0 0.052 12.9 0.0 3.1 3 0 0 3 3 3 2 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 ORF109181 - 3.2e-06 27.1 0.3 0.021 14.8 0.0 3.5 4 0 0 4 4 4 2 AhpC/TSA family Glutaredoxin PF00462.24 ORF109181 - 0.0092 16.2 2.2 3.1 8.1 0.0 4.2 4 0 0 4 4 4 1 Glutaredoxin Redoxin PF08534.10 ORF109181 - 0.03 14.0 0.0 4.6 7.0 0.0 3.0 3 0 0 3 3 3 0 Redoxin RCC1_2 PF13540.6 ORF93365 - 2.1e-17 62.4 43.6 0.12 12.2 0.0 12.5 13 0 0 13 13 13 10 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF93365 - 2.1e-06 27.9 16.4 20 5.2 0.0 10.3 6 2 4 10 10 10 1 Uncharacterised ACR, YagE family COG1723 Choline_sulf_C PF12411.8 ORF93365 - 0.19 11.6 0.5 13 5.6 0.0 4.0 4 0 0 4 4 4 0 Choline sulfatase enzyme C terminal NOZZLE PF08744.10 ORF93365 - 0.41 10.1 14.3 0.49 9.8 0.6 3.6 2 1 0 3 3 3 0 Plant transcription factor NOZZLE DDE_Tnp_1_3 PF13612.6 ORF93365 - 0.62 10.1 3.5 89 3.1 0.0 4.9 6 0 0 6 6 6 0 Transposase DDE domain Ribosomal_L29 PF00831.23 ORF93365 - 7.9 6.5 6.3 39 4.3 0.1 3.5 4 0 0 4 4 4 0 Ribosomal L29 protein YfhD PF14151.6 ORF78683 - 0.38 10.9 2.5 0.72 10.1 2.5 1.4 1 0 0 1 1 1 0 YfhD-like protein Rubis-subs-bind PF09273.11 ORF71166 - 1.1e-14 55.2 0.1 2.2e-14 54.2 0.1 1.5 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding SET PF00856.28 ORF71166 - 3.8e-14 53.4 0.1 9.3e-14 52.2 0.0 1.7 2 0 0 2 2 2 1 SET domain Ion_trans PF00520.31 ORF57162 - 1.2e-23 83.6 10.9 1.7e-23 83.1 10.9 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF57162 - 1.9e-11 42.6 1.5 1.8e-05 23.9 0.2 2.9 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF57162 - 2.5e-10 39.4 0.4 0.00012 21.8 0.0 3.0 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF57162 - 1.7e-09 36.7 0.4 3.8e-05 23.0 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF57162 - 5.2e-09 36.4 2.7 6.4e-09 36.1 0.9 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF57162 - 3.6e-06 26.7 1.0 0.0024 17.7 0.2 2.8 2 0 0 2 2 2 2 EF-hand domain pair AIP3 PF03915.13 ORF57162 - 0.071 12.2 2.0 0.31 10.1 1.1 1.9 1 1 1 2 2 2 0 Actin interacting protein 3 Saccharop_dh_N PF04455.12 ORF57162 - 0.1 13.0 0.0 0.23 11.9 0.0 1.5 1 0 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region EF-hand_4 PF12763.7 ORF57162 - 0.15 12.0 0.7 1.4 8.9 0.1 2.5 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand SO_alpha_A3 PF17806.1 ORF32949 - 0.11 12.9 0.4 5.4 7.4 0.0 2.5 2 0 0 2 2 2 0 Sarcosine oxidase A3 domain Ank_2 PF12796.7 ORF24769 - 3.9e-20 72.2 0.0 2.9e-07 31.0 0.0 3.6 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF24769 - 5.5e-16 57.1 0.5 0.0024 18.2 0.0 5.7 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF24769 - 6e-13 48.7 1.7 4.8e-06 26.7 0.0 4.6 4 1 1 5 5 5 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF24769 - 2e-12 46.9 0.5 0.0029 18.0 0.0 5.1 5 0 0 5 5 5 3 Ankyrin repeat Ank_4 PF13637.6 ORF24769 - 7.8e-12 45.5 0.0 0.0025 18.4 0.0 4.4 3 1 1 4 4 4 4 Ankyrin repeats (many copies) cNMP_binding PF00027.29 ORF14005 - 0.0022 18.0 0.0 1.2 9.2 0.0 2.6 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain DUF4175 PF13779.6 ORF14005 - 0.32 8.9 7.1 0.5 8.2 7.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) Dynamin_M PF01031.20 ORF97829 - 2.3e-80 269.9 0.0 3.4e-80 269.3 0.0 1.3 1 0 0 1 1 1 1 Dynamin central region GED PF02212.18 ORF97829 - 2.2e-22 79.0 4.1 3.2e-21 75.3 0.0 3.7 4 0 0 4 4 4 1 Dynamin GTPase effector domain ALMS_motif PF15309.6 ORF97829 - 0.11 12.9 5.9 0.3 11.6 1.9 2.6 2 0 0 2 2 2 0 ALMS motif CHASE6_C PF17150.4 ORF97829 - 0.13 12.9 0.1 0.91 10.2 0.0 2.4 2 0 0 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain DUF3275 PF11679.8 ORF97829 - 3.8 7.4 10.7 1.1 9.2 4.9 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3275) FAD_binding_3 PF01494.19 ORF74729 - 1.6e-81 274.3 0.0 2e-81 273.9 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF74729 - 5.2e-06 25.9 0.0 0.0078 15.5 0.0 2.7 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF74729 - 0.00012 22.5 0.0 0.00048 20.6 0.1 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF74729 - 0.00046 19.5 0.0 0.0096 15.2 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF74729 - 0.0013 17.5 0.5 0.0077 15.0 0.5 1.9 2 0 0 2 2 2 1 HI0933-like protein 2-Hacid_dh_C PF02826.19 ORF74729 - 0.0058 16.0 0.0 0.76 9.1 0.0 2.9 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 ORF74729 - 0.0078 16.4 0.0 0.019 15.2 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF74729 - 0.046 13.0 0.1 0.078 12.2 0.1 1.2 1 0 0 1 1 1 0 Thi4 family TrkA_N PF02254.18 ORF74729 - 0.059 13.6 0.0 0.14 12.4 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain Lycopene_cycl PF05834.12 ORF74729 - 0.1 11.6 0.4 0.45 9.5 0.2 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein DAO PF01266.24 ORF74729 - 0.15 11.6 0.3 0.82 9.2 0.1 2.2 3 0 0 3 3 3 0 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 ORF74729 - 0.15 11.6 0.4 0.25 10.9 0.4 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ThiF PF00899.21 ORF74729 - 0.18 11.2 0.0 0.29 10.5 0.0 1.3 1 0 0 1 1 1 0 ThiF family DUF4440 PF14534.6 ORF28913 - 7e-11 42.5 0.1 0.0079 16.6 0.0 3.7 3 0 0 3 3 3 3 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF28913 - 1.4e-09 38.5 2.9 0.045 14.4 0.0 4.9 3 2 2 5 5 5 3 SnoaL-like domain SnoaL_4 PF13577.6 ORF28913 - 6.3e-06 26.3 0.1 1.2 9.2 0.0 3.4 3 0 0 3 3 3 3 SnoaL-like domain OB_NTP_bind PF07717.16 ORF28913 - 7e-05 23.1 0.6 4.3 7.8 0.0 4.0 4 0 0 4 4 4 2 Oligonucleotide/oligosaccharide-binding (OB)-fold CSD PF00313.22 ORF28913 - 0.00089 19.1 5.9 4.9 7.1 0.1 4.2 4 0 0 4 4 4 3 'Cold-shock' DNA-binding domain Polyketide_cyc2 PF10604.9 ORF28913 - 0.002 18.4 1.3 12 6.1 0.0 5.0 5 1 0 5 5 5 1 Polyketide cyclase / dehydrase and lipid transport OLF PF02191.16 ORF28913 - 0.021 14.4 1.9 9.8 5.6 0.0 3.7 4 0 0 4 4 4 0 Olfactomedin-like domain MccV PF17508.2 ORF28913 - 1.1 9.8 6.2 16 6.1 0.1 3.5 3 0 0 3 3 3 0 Microcin V bacteriocin GBP_PSP PF02425.15 ORF28913 - 5.5 6.7 9.6 57 3.5 0.0 4.4 4 0 0 4 4 4 0 Paralytic/GBP/PSP peptide DUF202 PF02656.15 ORF15282 - 5.6e-09 36.3 4.0 1.1e-08 35.4 4.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF202) VTC PF09359.10 ORF15282 - 2.3e-05 24.0 0.0 0.0001 21.8 0.0 2.0 1 1 0 1 1 1 1 VTC domain tRNA-synt_1c PF00749.21 ORF111753 - 1.8e-128 427.8 0.0 2.3e-128 427.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 ORF111753 - 1.3e-63 214.0 0.0 2.6e-63 213.0 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain zf-RING_2 PF13639.6 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 4.1e-07 30.2 2.1 8.8e-07 29.2 2.1 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 1.2e-06 28.1 2.7 2.5e-06 27.1 2.7 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 0.006 16.4 1.2 0.015 15.2 1.2 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 0.0063 16.8 1.5 0.019 15.3 1.5 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 0.02 14.7 1.0 0.041 13.7 1.0 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 0.026 14.6 0.7 0.051 13.6 0.7 1.5 1 0 0 1 1 1 0 RING-type zinc-finger Zn_ribbon_17 PF17120.5 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 0.03 13.9 1.4 0.059 13.0 1.4 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 0.059 13.5 1.5 0.16 12.1 1.5 1.7 1 0 0 1 1 1 0 FANCL C-terminal domain zf-ANAPC11 PF12861.7 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 0.083 12.9 0.2 0.17 12.0 0.2 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 NODE_5780_length_1657_cov_50.120222_g4168_i0reverse_frame_1 - 0.19 11.7 1.7 0.4 10.7 1.7 1.5 1 0 0 1 1 1 0 zinc-RING finger domain DUF2140 PF09911.9 ORF84306 - 0.052 13.1 0.8 0.21 11.1 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) DUF2140 PF09911.9 ORF82434 - 0.046 13.3 0.9 0.21 11.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) DUF2140 PF09911.9 ORF81778 - 0.046 13.3 0.9 0.21 11.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) RCC1 PF00415.18 ORF76887 - 1.6e-55 185.5 24.7 2.7e-15 56.7 0.6 6.5 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF76887 - 5.1e-20 70.7 37.5 1.5e-05 24.7 3.0 6.3 6 0 0 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat zf-C4H2 PF10146.9 ORF76887 - 0.0005 20.4 0.2 0.00072 19.9 0.2 1.1 1 0 0 1 1 1 1 Zinc finger-containing protein DUF745 PF05335.13 ORF76887 - 0.036 13.8 1.9 0.069 12.9 1.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF745) TACC_C PF05010.14 ORF76887 - 0.049 13.4 4.0 0.073 12.8 4.0 1.1 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal UPF0242 PF06785.11 ORF76887 - 0.14 12.3 4.2 0.2 11.7 4.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 ORF76887 - 0.46 9.0 1.1 0.67 8.5 1.1 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Nup88 PF10168.9 ORF76887 - 0.77 7.5 3.9 1.1 7.0 3.9 1.1 1 0 0 1 1 1 0 Nuclear pore component Hrs_helical PF12210.8 ORF76887 - 1.7 9.2 6.6 4.5 7.9 6.6 1.7 1 1 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate DUF883 PF05957.13 ORF76887 - 2.3 8.9 6.3 0.22 12.1 1.1 2.1 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF2140 PF09911.9 ORF75293 - 0.046 13.3 0.9 0.21 11.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) AAA_23 PF13476.6 ORF72577 - 3.6e-19 70.1 5.6 2.4e-17 64.1 0.0 2.5 1 1 1 2 2 2 1 AAA domain SMC_N PF02463.19 ORF72577 - 6e-19 68.3 0.0 1.4e-18 67.2 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF72577 - 7e-06 25.7 0.0 1.5e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF72577 - 2.3e-05 24.3 0.0 0.0024 17.7 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 ORF72577 - 0.00027 20.8 0.0 0.34 10.7 0.0 2.5 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 ORF72577 - 0.0043 17.3 4.7 0.023 15.0 0.4 3.6 2 2 0 2 2 2 1 AAA domain NTPase_P4 PF11602.8 ORF72577 - 0.018 14.2 0.0 0.029 13.6 0.0 1.2 1 0 0 1 1 1 0 ATPase P4 of dsRNA bacteriophage phi-12 DUF2161 PF09929.9 ORF72577 - 0.054 13.6 0.2 0.12 12.5 0.2 1.6 1 0 0 1 1 1 0 Putative PD-(D/E)XK phosphodiesterase (DUF2161) ABC_tran PF00005.27 ORF72577 - 0.063 13.8 5.7 2.1 8.9 0.0 3.4 2 1 0 2 2 2 0 ABC transporter HTH_Tnp_1 PF01527.20 ORF72577 - 0.08 13.3 0.3 3.8 7.9 0.2 3.2 2 1 1 3 3 3 0 Transposase Sec34 PF04136.15 ORF72577 - 5.1 7.0 16.5 0.22 11.4 0.2 3.8 2 1 1 4 4 4 0 Sec34-like family DUF2140 PF09911.9 ORF66883 - 0.053 13.1 1.3 0.15 11.6 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) DUF2140 PF09911.9 ORF62675 - 0.046 13.3 0.9 0.21 11.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) Sugar_tr PF00083.24 ORF59869 - 8e-63 212.9 19.8 1.1e-62 212.5 19.8 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF59869 - 1.7e-11 43.7 33.0 1.4e-10 40.7 26.5 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily Ank_2 PF12796.7 ORF5635 - 2e-19 70.0 0.1 8.8e-05 23.0 0.0 4.6 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF5635 - 2.6e-16 58.0 4.0 0.00035 20.8 0.0 6.2 6 0 0 6 6 6 4 Ankyrin repeat Ank_4 PF13637.6 ORF5635 - 3.3e-16 59.4 0.8 2.2e-05 24.9 0.1 4.2 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF5635 - 1.4e-12 47.6 2.7 4e-05 23.8 0.0 4.8 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF5635 - 3.5e-12 46.2 4.9 8e-05 22.9 0.1 6.1 6 0 0 6 6 6 3 Ankyrin repeat DUF2140 PF09911.9 ORF52097 - 0.046 13.3 0.9 0.21 11.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) IPT PF01745.16 ORF51513 - 0.15 11.5 0.0 0.24 10.8 0.0 1.2 1 0 0 1 1 1 0 Isopentenyl transferase Syndecan PF01034.20 ORF51513 - 4.9 7.1 5.3 2.4 8.2 0.9 2.5 2 0 0 2 2 2 0 Syndecan domain DUF2140 PF09911.9 ORF23991 - 0.041 13.4 0.9 0.21 11.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) DUF2140 PF09911.9 ORF17578 - 0.067 12.7 0.7 0.21 11.1 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) DUF2140 PF09911.9 ORF107092 - 0.046 13.3 0.9 0.21 11.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) DUF2140 PF09911.9 ORF103926 - 0.046 13.3 0.9 0.21 11.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) Pkinase PF00069.25 ORF79256 - 3.7e-45 154.4 5.1 9.9e-45 152.9 5.1 1.8 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF79256 - 7.1e-32 110.7 2.8 1.2e-31 109.9 2.8 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF79256 - 2.8e-06 26.9 0.3 5.7e-06 25.9 0.3 1.5 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF79256 - 4e-05 23.1 0.6 0.00022 20.6 0.6 2.1 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF79256 - 0.011 14.7 18.6 0.3 10.0 18.6 2.9 1 1 0 1 1 1 0 Haspin like kinase domain cwf21 PF08312.12 ORF79256 - 0.14 12.3 1.6 0.39 10.9 1.6 1.7 1 0 0 1 1 1 0 cwf21 domain APH PF01636.23 ORF79256 - 0.2 11.5 0.1 0.74 9.7 0.2 1.7 1 1 1 2 2 2 0 Phosphotransferase enzyme family Aminotran_1_2 PF00155.21 ORF35656 - 4.8e-41 141.1 0.0 6.4e-41 140.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Acyl-ACP_TE PF01643.17 ORF35656 - 2.7e-05 23.6 0.0 4.2e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Acyl-ACP thioesterase Cys_Met_Meta_PP PF01053.20 ORF35656 - 0.0018 16.9 0.0 0.0026 16.3 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 ORF35656 - 0.0035 16.3 0.0 0.012 14.6 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V SHMT PF00464.19 ORF35656 - 0.048 12.2 0.0 0.083 11.5 0.0 1.4 1 1 0 1 1 1 0 Serine hydroxymethyltransferase DegT_DnrJ_EryC1 PF01041.17 ORF35656 - 0.13 11.5 0.1 6.5 5.9 0.0 2.4 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family WXG100 PF06013.12 ORF32141 - 0.019 15.2 2.0 4 7.7 0.0 3.6 3 1 1 4 4 4 0 Proteins of 100 residues with WXG Apolipoprotein PF01442.18 ORF32141 - 0.084 12.7 0.0 2.1 8.2 0.0 2.6 2 1 1 3 3 3 0 Apolipoprotein A1/A4/E domain YflT PF11181.8 ORF32141 - 0.9 10.1 2.7 1.3 9.5 0.0 2.6 3 0 0 3 3 3 0 Heat induced stress protein YflT MlaD PF02470.20 ORF30262 - 5e-37 126.0 0.5 1.4e-14 54.1 0.0 3.4 3 0 0 3 3 3 3 MlaD protein DASH_Duo1 PF08651.10 ORF30262 - 0.0011 18.7 3.0 0.0023 17.7 1.3 2.3 1 1 2 3 3 3 1 DASH complex subunit Duo1 DUF948 PF06103.11 ORF30262 - 0.002 18.4 1.1 0.0064 16.7 1.0 2.0 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF948) DHC_N2 PF08393.13 ORF30262 - 0.0056 15.8 1.0 0.0087 15.2 1.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 DHR10 PF18595.1 ORF30262 - 0.0069 16.4 1.7 0.015 15.4 1.7 1.5 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain DUF445 PF04286.12 ORF30262 - 0.017 14.9 0.1 0.026 14.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF445) MapZ_EC1 PF18041.1 ORF30262 - 0.088 13.0 0.9 0.17 12.1 0.9 1.4 1 0 0 1 1 1 0 MapZ extracellular domain 1 PilJ PF13675.6 ORF30262 - 0.16 12.0 1.8 0.31 11.1 1.8 1.4 1 0 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term BLOC1_2 PF10046.9 ORF30262 - 0.33 11.3 2.7 0.8 10.0 2.7 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF773 PF05600.12 ORF30262 - 0.66 8.6 7.2 0.94 8.1 7.2 1.1 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 OmpH PF03938.14 ORF30262 - 0.68 10.3 4.1 1.3 9.4 3.3 1.8 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) YlbD_coat PF14071.6 ORF30262 - 7.7 6.8 7.0 61 3.9 2.3 2.7 1 1 2 3 3 3 0 Putative coat protein Prominin PF05478.11 ORF30262 - 9.3 4.1 6.6 15 3.4 5.9 1.3 1 1 0 1 1 1 0 Prominin MORN PF02493.20 ORF26434 - 2.8e-65 212.5 93.5 2.3e-06 27.1 1.1 19.4 19 0 0 19 19 19 18 MORN repeat Tudor_2 PF18104.1 ORF26434 - 0.042 13.5 3.1 0.83 9.4 0.0 4.0 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain tRNA-synt_1_2 PF13603.6 ORF2557 - 6.2e-37 126.9 0.0 1.1e-36 126.0 0.0 1.4 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1 PF00133.22 ORF2557 - 1.4e-28 99.5 0.3 1.2e-09 37.0 0.0 3.2 3 0 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF2557 - 1.7e-17 63.8 0.0 3e-17 63.0 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF2557 - 6.7e-07 28.4 0.0 4.3e-05 22.4 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) EF-hand_6 PF13405.6 ORF88136 - 7.9e-21 72.2 0.0 3.5e-05 23.4 0.0 4.6 4 0 0 4 4 4 4 EF-hand domain EF-hand_1 PF00036.32 ORF88136 - 1.5e-20 71.1 0.0 8.4e-06 25.0 0.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_5 PF13202.6 ORF88136 - 2.7e-16 58.2 0.5 0.0019 17.6 0.0 4.6 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF88136 - 6.5e-15 55.3 0.0 6.5e-07 29.7 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF88136 - 6.1e-09 35.6 0.0 0.1 12.5 0.1 4.1 3 1 1 4 4 4 3 EF-hand domain pair Tektin PF03148.14 ORF88136 - 1.7e-05 23.8 24.5 0.00017 20.5 24.4 2.3 1 1 0 1 1 1 1 Tektin family T2SSE_N PF05157.15 ORF88136 - 0.0032 17.7 0.9 0.23 11.7 0.7 2.9 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein E, N-terminal domain DUF3584 PF12128.8 ORF88136 - 0.068 10.7 14.9 1.2 6.5 17.9 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) DUF2935 PF11155.8 ORF88136 - 0.96 9.8 4.3 0.65 10.3 1.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) DUF1664 PF07889.12 ORF88136 - 1.4 8.9 11.7 2.5 8.2 2.8 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DASH_Duo1 PF08651.10 ORF88136 - 3.3 7.5 6.4 12 5.8 0.3 2.8 3 0 0 3 3 3 0 DASH complex subunit Duo1 DRY_EERY PF09750.9 ORF88136 - 3.4 8.0 6.7 0.71 10.1 2.6 2.0 1 1 1 2 2 2 0 Alternative splicing regulator DUF812 PF05667.11 ORF88136 - 3.9 6.2 18.9 16 4.2 18.5 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF812) UQ_con PF00179.26 ORF81719 - 7.9e-06 25.6 0.0 1.7e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme ImpE PF07024.13 ORF81719 - 0.065 13.3 0.0 0.85 9.7 0.0 2.3 2 0 0 2 2 2 0 ImpE protein NINJA_B PF16136.5 ORF81719 - 1.2 9.5 3.4 16 5.9 0.1 2.8 3 0 0 3 3 3 0 Putative nuclear localisation signal zf-RING_2 PF13639.6 ORF63302 - 5.5e-08 33.0 4.8 1.3e-07 31.9 4.8 1.7 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF63302 - 5.3e-06 26.1 1.6 1.6e-05 24.5 1.6 1.9 1 0 0 1 1 1 1 RING-like zinc finger EF-hand_6 PF13405.6 ORF63302 - 4e-05 23.2 0.0 0.17 11.9 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain zf-RING_5 PF14634.6 ORF63302 - 0.00019 21.3 6.4 0.00071 19.5 6.4 2.0 1 1 0 1 1 1 1 zinc-RING finger domain EF-hand_1 PF00036.32 ORF63302 - 0.00059 19.2 0.0 0.47 10.1 0.0 2.7 2 0 0 2 2 2 2 EF hand zf-rbx1 PF12678.7 ORF63302 - 0.0043 17.3 4.4 0.011 16.0 4.4 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF63302 - 0.0068 16.2 8.5 0.023 14.6 8.5 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) EF-hand_7 PF13499.6 ORF63302 - 0.011 16.1 0.4 3.6 8.1 0.5 3.2 2 1 1 3 3 3 0 EF-hand domain pair zf-C3H2C3 PF17122.5 ORF63302 - 0.013 15.5 0.5 0.031 14.3 0.5 1.6 1 0 0 1 1 1 0 Zinc-finger zf-C3HC4_2 PF13923.6 ORF63302 - 0.018 14.9 6.9 0.073 12.9 6.9 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_9 PF13901.6 ORF63302 - 0.04 13.9 1.2 0.068 13.1 1.2 1.3 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zf-RING_UBOX PF13445.6 ORF63302 - 0.12 12.4 1.5 0.81 9.8 1.6 2.4 1 1 1 2 2 2 0 RING-type zinc-finger BBL5 PF07289.11 ORF63302 - 0.13 11.3 0.0 0.18 10.8 0.0 1.2 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein DUF5347 PF17282.2 ORF63302 - 0.17 12.2 0.0 0.36 11.1 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5347) Prok-RING_4 PF14447.6 ORF63302 - 0.36 10.7 9.6 1.5 8.7 9.7 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF61003 - 5.5e-08 33.0 4.8 1.3e-07 31.9 4.8 1.7 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF61003 - 5.3e-06 26.1 1.6 1.6e-05 24.5 1.6 1.9 1 0 0 1 1 1 1 RING-like zinc finger EF-hand_6 PF13405.6 ORF61003 - 4e-05 23.2 0.0 0.17 11.9 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain zf-RING_5 PF14634.6 ORF61003 - 0.00019 21.3 6.4 0.00071 19.5 6.4 2.0 1 1 0 1 1 1 1 zinc-RING finger domain EF-hand_1 PF00036.32 ORF61003 - 0.00059 19.2 0.0 0.47 10.1 0.0 2.7 2 0 0 2 2 2 2 EF hand zf-rbx1 PF12678.7 ORF61003 - 0.0043 17.3 4.4 0.011 16.0 4.4 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF61003 - 0.0068 16.2 8.5 0.023 14.6 8.5 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) EF-hand_7 PF13499.6 ORF61003 - 0.011 16.1 0.4 3.6 8.1 0.5 3.2 2 1 1 3 3 3 0 EF-hand domain pair zf-C3H2C3 PF17122.5 ORF61003 - 0.013 15.5 0.5 0.031 14.3 0.5 1.6 1 0 0 1 1 1 0 Zinc-finger zf-C3HC4_2 PF13923.6 ORF61003 - 0.018 14.9 6.9 0.073 12.9 6.9 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_9 PF13901.6 ORF61003 - 0.04 13.9 1.2 0.068 13.1 1.2 1.3 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zf-RING_UBOX PF13445.6 ORF61003 - 0.12 12.4 1.5 0.81 9.8 1.6 2.4 1 1 1 2 2 2 0 RING-type zinc-finger BBL5 PF07289.11 ORF61003 - 0.13 11.3 0.0 0.18 10.8 0.0 1.2 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein DUF5347 PF17282.2 ORF61003 - 0.17 12.2 0.0 0.36 11.1 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5347) Prok-RING_4 PF14447.6 ORF61003 - 0.36 10.7 9.6 1.5 8.7 9.7 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 Spt5_N PF11942.8 ORF41058 - 1.6 9.8 8.8 0.45 11.5 2.0 2.9 3 0 0 3 3 3 0 Spt5 transcription elongation factor, acidic N-terminal Sulfatase PF00884.23 ORF24777 - 2e-87 293.5 0.1 2.7e-87 293.1 0.1 1.1 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 ORF24777 - 0.00017 22.3 0.0 0.00052 20.7 0.0 1.8 1 0 0 1 1 1 1 C-terminal region of aryl-sulfatase Phosphodiest PF01663.22 ORF24777 - 0.00037 20.2 0.3 0.13 11.8 0.5 2.9 2 1 1 3 3 3 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF229 PF02995.17 ORF24777 - 0.00055 18.7 0.0 0.0076 14.9 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF229) Phosphoesterase PF04185.14 ORF24777 - 0.019 14.2 0.0 0.05 12.8 0.0 1.7 1 0 0 1 1 1 0 Phosphoesterase family DUF1501 PF07394.12 ORF24777 - 0.089 11.8 0.0 0.21 10.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) Alpha-amylase PF00128.24 ORF22417 - 3.5e-128 427.9 0.0 4.7e-128 427.5 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, catalytic domain DUF3459 PF11941.8 ORF22417 - 1.6e-08 34.8 0.1 3.6e-07 30.4 0.1 2.6 2 0 0 2 2 2 1 Domain of unknown function (DUF3459) Malt_amylase_C PF16657.5 ORF22417 - 0.00072 19.6 0.0 0.002 18.2 0.0 1.8 1 1 0 1 1 1 1 Maltogenic Amylase, C-terminal domain hDGE_amylase PF14701.6 ORF22417 - 0.0048 16.0 0.0 0.0072 15.5 0.0 1.1 1 0 0 1 1 1 1 Glycogen debranching enzyme, glucanotransferase domain GlnD_UR_UTase PF08335.11 ORF19149 - 0.091 12.9 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 GlnD PII-uridylyltransferase L27_N PF09060.10 ORF19149 - 0.2 11.8 1.7 1.4 9.0 0.1 2.5 2 0 0 2 2 2 0 L27_N BRO1 PF03097.18 ORF95549 - 4.4e-53 180.5 4.8 5.4e-53 180.2 4.8 1.1 1 0 0 1 1 1 1 BRO1-like domain ALIX_LYPXL_bnd PF13949.6 ORF95549 - 3.5e-27 95.5 0.4 3.5e-27 95.5 0.4 2.1 3 0 0 3 3 3 1 ALIX V-shaped domain binding to HIV Pet127 PF08634.10 ORF63649 - 4.7e-81 272.2 0.2 6e-81 271.9 0.2 1.1 1 0 0 1 1 1 1 Mitochondrial protein Pet127 Peptidase_M1 PF01433.20 ORF37279 - 1.3e-32 113.2 0.5 2.5e-32 112.2 0.5 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF37279 - 2.6e-21 76.7 1.0 4.1e-21 76.0 1.0 1.3 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TnpW PF14202.6 ORF37279 - 0.034 14.0 0.1 1.1 9.2 0.0 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW KH_1 PF00013.29 ORF28465 - 9.1e-13 47.8 0.0 3e-09 36.6 0.2 2.4 2 0 0 2 2 2 2 KH domain zf-CCHC PF00098.23 ORF28465 - 1.4e-06 28.1 8.0 0.0015 18.5 1.0 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 ORF28465 - 0.0015 18.5 4.4 0.47 10.5 0.1 2.4 1 1 1 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF28465 - 0.81 9.5 12.0 1.2 8.9 0.4 3.3 3 0 0 3 3 3 0 Zinc knuckle zf-CCHC_6 PF15288.6 ORF28465 - 1.1 9.2 9.5 1.4 8.8 1.4 2.9 2 0 0 2 2 2 0 Zinc knuckle Ank_2 PF12796.7 ORF27503 - 1.2e-16 61.0 0.0 6.2e-09 36.3 0.0 2.7 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF27503 - 2.1e-12 47.0 0.3 1.1e-06 28.8 0.0 3.5 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF27503 - 1e-11 43.9 0.0 0.0051 17.2 0.0 3.8 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF27503 - 1.8e-11 44.3 0.0 3e-07 30.8 0.0 3.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF27503 - 9.3e-10 38.5 0.0 0.05 14.1 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat FYVE PF01363.21 ORF27503 - 0.00048 20.2 9.8 0.00098 19.2 9.8 1.5 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF27503 - 0.0047 17.1 6.4 0.0047 17.1 6.4 2.3 2 1 0 2 2 2 1 FYVE-type zinc finger GYF PF02213.16 ORF104662 - 2.7e-06 27.0 1.6 5.4e-06 26.0 1.6 1.5 1 0 0 1 1 1 1 GYF domain Voldacs PF03517.13 ORF104662 - 6.6 6.8 9.4 2.3 8.3 6.1 2.0 1 1 0 1 1 1 0 Regulator of volume decrease after cellular swelling Ank_2 PF12796.7 ORF103795 - 1.2e-16 61.0 0.0 6.2e-09 36.3 0.0 2.6 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF103795 - 2e-12 47.0 0.3 1.1e-06 28.8 0.0 3.5 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF103795 - 1e-11 43.9 0.0 0.0051 17.2 0.0 3.8 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF103795 - 1.8e-11 44.3 0.0 3e-07 30.8 0.0 3.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF103795 - 9.3e-10 38.5 0.0 0.05 14.1 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat FYVE PF01363.21 ORF103795 - 0.00048 20.2 9.8 0.00098 19.2 9.8 1.5 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF103795 - 0.0047 17.1 6.4 0.0047 17.1 6.4 2.3 2 1 0 2 2 2 1 FYVE-type zinc finger DUF4440 PF14534.6 ORF100665 - 6.7e-11 42.5 0.1 0.0078 16.6 0.0 3.7 3 0 0 3 3 3 3 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF100665 - 1.5e-09 38.4 3.2 0.044 14.4 0.0 4.9 3 2 2 5 5 5 3 SnoaL-like domain SnoaL_4 PF13577.6 ORF100665 - 5e-06 26.7 0.1 1.2 9.3 0.0 3.5 3 0 0 3 3 3 2 SnoaL-like domain OB_NTP_bind PF07717.16 ORF100665 - 5.7e-05 23.4 1.0 4.3 7.8 0.0 4.0 4 0 0 4 4 4 2 Oligonucleotide/oligosaccharide-binding (OB)-fold CSD PF00313.22 ORF100665 - 0.00086 19.1 5.9 4.9 7.1 0.1 4.2 4 0 0 4 4 4 2 'Cold-shock' DNA-binding domain Polyketide_cyc2 PF10604.9 ORF100665 - 0.0063 16.8 2.2 12 6.1 0.0 4.8 4 2 1 5 5 5 1 Polyketide cyclase / dehydrase and lipid transport OLF PF02191.16 ORF100665 - 0.021 14.4 1.9 9.7 5.6 0.0 3.7 4 0 0 4 4 4 0 Olfactomedin-like domain Mustang PF15682.5 ORF100665 - 0.087 12.9 0.0 33 4.7 0.0 3.2 3 0 0 3 3 3 0 Musculoskeletal, temporally activated-embryonic nuclear protein 1 bMG5 PF17972.1 ORF100665 - 0.091 13.1 0.0 8.8 6.7 0.0 3.5 4 0 0 4 4 4 0 Bacterial Alpha-2-macroglobulin MG5 domain PE_PPE_C PF12484.8 ORF100665 - 1.7 9.6 14.2 1.5 9.8 3.5 3.4 3 0 0 3 3 3 0 Polymorphic PE/PPE proteins C terminal MccV PF17508.2 ORF100665 - 1.9 9.1 8.6 16 6.1 0.1 3.5 3 0 0 3 3 3 0 Microcin V bacteriocin Peptidase_M75 PF09375.10 ORF100665 - 3.8 6.9 12.6 8.7 5.7 3.2 3.0 3 0 0 3 3 3 0 Imelysin GBP_PSP PF02425.15 ORF100665 - 5.3 6.8 9.6 57 3.5 0.0 4.4 4 0 0 4 4 4 0 Paralytic/GBP/PSP peptide DAP3 PF10236.9 ORF99826 - 3.9e-18 65.7 0.0 1.1e-16 60.9 0.0 2.5 1 1 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 AAA_16 PF13191.6 ORF99826 - 9.9e-05 22.8 0.4 0.001 19.5 0.4 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_10 PF12846.7 ORF99826 - 0.022 13.7 0.0 0.032 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_28 PF13521.6 ORF99826 - 0.087 13.1 0.1 0.28 11.4 0.1 2.0 1 1 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 ORF99826 - 0.091 12.4 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Thymidylate kinase AAA_30 PF13604.6 ORF99826 - 0.16 11.7 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain FAST_1 PF06743.15 ORF74446 - 5.6e-06 26.2 0.0 0.042 13.8 0.0 5.5 4 2 1 6 6 6 2 FAST kinase-like protein, subdomain 1 Glyco_hydro_47 PF01532.20 ORF6764 - 6.3e-123 411.0 0.4 7.9e-123 410.7 0.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 47 5_nucleotid_C PF02872.18 ORF59388 - 2.2e-14 54.0 0.0 4.9e-14 52.8 0.0 1.5 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain EF-hand_1 PF00036.32 ORF59388 - 2.9e-13 48.3 6.5 1.5e-06 27.4 2.6 3.6 2 1 1 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF59388 - 5.4e-12 44.6 4.8 0.00082 18.8 0.0 3.8 2 1 1 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF59388 - 1.1e-10 40.5 3.9 6e-05 22.6 0.8 3.6 2 1 1 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF59388 - 4.3e-10 39.9 5.0 2e-06 28.2 1.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF59388 - 9.3e-06 25.4 2.9 0.00036 20.3 1.5 2.6 2 0 0 2 2 2 1 EF-hand domain pair Metallophos PF00149.28 ORF59388 - 0.00014 22.4 0.0 0.00028 21.5 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase EF-hand_4 PF12763.7 ORF59388 - 0.13 12.2 1.0 0.52 10.3 0.6 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF59388 - 0.17 11.8 0.4 2.8 7.9 0.1 2.3 2 0 0 2 2 2 0 EF hand Dockerin_1 PF00404.18 ORF59388 - 1.1 9.5 2.7 24 5.2 0.1 2.8 1 1 2 3 3 3 0 Dockerin type I domain SPARC_Ca_bdg PF10591.9 ORF59388 - 4.7 7.6 4.5 30 5.0 0.1 3.2 3 1 1 4 4 4 0 Secreted protein acidic and rich in cysteine Ca binding region TPR_MalT PF17874.1 ORF57603 - 3.4e-05 23.4 11.7 0.001 18.5 3.4 2.4 1 1 1 2 2 2 2 MalT-like TPR region TPR_1 PF00515.28 ORF57603 - 0.00064 19.4 3.9 0.5 10.3 0.1 4.1 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF57603 - 0.001 19.3 10.5 0.12 12.6 1.5 3.8 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF57603 - 0.0024 17.9 6.0 1.3 9.4 0.3 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat NARP1 PF12569.8 ORF57603 - 0.032 13.1 0.1 0.36 9.7 0.0 2.0 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 TPR_8 PF13181.6 ORF57603 - 0.078 13.2 3.0 0.12 12.7 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF57603 - 0.21 11.5 4.6 1.2 9.1 0.4 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Ion_trans PF00520.31 ORF57439 - 7e-34 117.1 21.7 3e-23 82.3 15.6 2.1 2 0 0 2 2 2 2 Ion transport protein EF-hand_1 PF00036.32 ORF57439 - 4.8e-05 22.6 0.0 0.00013 21.3 0.0 1.7 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF57439 - 0.00044 20.0 0.2 0.0016 18.2 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF57439 - 0.0013 19.1 0.0 0.0029 18.0 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF57439 - 0.0038 17.5 0.7 0.0078 16.5 0.7 1.4 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Phage_Gp23 PF10669.9 ORF57439 - 0.025 14.9 0.2 0.052 13.9 0.2 1.4 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) EF-hand_5 PF13202.6 ORF57439 - 0.038 13.5 0.1 0.078 12.5 0.1 1.5 1 0 0 1 1 1 0 EF hand TssO PF17561.2 ORF57439 - 0.06 13.5 0.3 0.13 12.4 0.3 1.5 1 0 0 1 1 1 0 Type VI secretion system, TssO Ion_trans PF00520.31 ORF24949 - 4.6e-20 71.9 21.5 7.2e-20 71.3 21.5 1.3 1 0 0 1 1 1 1 Ion transport protein Adeno_E3_CR2 PF02439.15 ORF24949 - 1.3 8.8 6.5 3.6 7.4 6.5 1.7 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 MFS_1 PF07690.16 ORF24949 - 3.3 6.5 12.7 5.1 5.9 12.7 1.4 1 1 0 1 1 1 0 Major Facilitator Superfamily SSF PF00474.17 ORF1030 - 2.5e-140 467.9 38.5 3.6e-140 467.4 38.5 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family DUF2818 PF10993.8 ORF1030 - 0.095 13.3 0.0 0.095 13.3 0.0 4.2 4 1 0 4 4 4 0 Protein of unknown function (DUF2818) SPC12 PF06645.13 ORF1030 - 0.12 12.5 0.2 0.12 12.5 0.2 4.6 6 0 0 6 6 6 0 Microsomal signal peptidase 12 kDa subunit (SPC12) PGI PF00342.19 ORF102445 - 8.5e-259 859.0 0.1 9.7e-259 858.8 0.1 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase Ion_trans PF00520.31 ORF92199 - 1.1e-20 73.9 24.3 1.4e-20 73.6 24.3 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF92199 - 9.2e-09 34.2 4.8 0.00029 20.1 0.2 2.7 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF92199 - 1.2e-08 34.0 4.4 0.00014 21.2 0.5 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF92199 - 2.6e-08 33.1 1.3 0.0013 18.5 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF92199 - 2e-06 28.2 1.1 4.5e-06 27.0 0.3 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF92199 - 0.00044 20.0 1.9 0.027 14.3 0.1 2.9 2 0 0 2 2 2 1 EF-hand domain pair N1221 PF07923.13 ORF92199 - 0.0078 15.4 0.1 0.8 8.8 0.0 2.6 3 0 0 3 3 3 1 N1221-like protein ABC_tran PF00005.27 ORF91515 - 2e-28 99.6 0.0 3e-28 99.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF91515 - 1.3e-27 97.2 6.7 1.7e-27 96.8 6.7 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF91515 - 0.00017 21.1 0.3 0.41 10.1 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain DUF87 PF01935.17 ORF91515 - 0.002 18.3 0.0 0.0045 17.1 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain IstB_IS21 PF01695.17 ORF91515 - 0.0034 17.2 0.1 0.063 13.0 0.0 2.8 3 0 0 3 3 3 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF91515 - 0.016 15.4 0.1 0.062 13.6 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF91515 - 0.03 14.1 0.0 0.065 13.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF91515 - 0.11 12.6 0.1 0.21 11.7 0.1 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_21 PF13304.6 ORF91515 - 0.15 11.8 0.5 1.1 9.0 0.1 2.1 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 ORF91515 - 0.2 12.2 0.0 0.34 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain YidC_periplas PF14849.6 ORF8890 - 1.1e-88 297.9 0.7 1.4e-88 297.4 0.7 1.2 1 0 0 1 1 1 1 YidC periplasmic domain 60KD_IMP PF02096.20 ORF8890 - 8.4e-61 204.7 15.4 1.4e-60 204.0 15.4 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein DUF3290 PF11694.8 ORF8890 - 0.09 12.7 0.0 0.28 11.2 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DUF2427 PF10348.9 ORF8890 - 1.8 8.4 5.7 0.26 11.1 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2427) AAA_18 PF13238.6 ORF88341 - 5.2 7.6 7.3 4.4 7.9 1.7 3.4 2 1 0 2 2 2 0 AAA domain Fumerase_C PF05683.12 ORF8092 - 8.3e-89 296.3 0.0 1.6e-88 295.4 0.0 1.5 1 0 0 1 1 1 1 Fumarase C-terminus Fumerase PF05681.14 ORF8092 - 2.4e-88 296.1 0.0 3.1e-88 295.7 0.0 1.1 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) Lipase_3 PF01764.25 ORF80391 - 1e-09 38.4 0.0 1.8e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) PH PF00169.29 ORF80391 - 0.013 15.9 0.1 4.3 7.9 0.0 2.3 2 0 0 2 2 2 0 PH domain Tweety PF04906.13 ORF74829 - 5.8e-07 28.5 2.6 5.8e-07 28.5 2.6 2.0 2 1 0 2 2 2 1 Tweety DivIC PF04977.15 ORF74829 - 0.0043 16.8 0.1 0.012 15.4 0.1 1.8 1 0 0 1 1 1 1 Septum formation initiator betaPIX_CC PF16523.5 ORF74829 - 0.068 13.0 0.4 0.16 11.8 0.4 1.5 1 0 0 1 1 1 0 betaPIX coiled coil ZapB PF06005.12 ORF74829 - 0.12 12.9 1.1 0.28 11.6 1.1 1.6 1 0 0 1 1 1 0 Cell division protein ZapB MHC2-interact PF09307.10 ORF74829 - 0.14 12.2 0.9 0.64 10.0 0.0 2.2 2 0 0 2 2 2 0 CLIP, MHC2 interacting YscO PF07321.12 ORF74829 - 0.23 11.4 2.8 0.23 11.4 0.7 1.9 2 0 0 2 2 2 0 Type III secretion protein YscO Tetraspanin PF00335.20 ORF74829 - 0.24 11.1 3.4 3.4 7.3 0.1 2.7 2 2 0 2 2 2 0 Tetraspanin family DUF3450 PF11932.8 ORF74829 - 0.43 9.8 3.2 0.34 10.2 0.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Jiraiya PF15038.6 ORF74829 - 4.6 6.6 8.5 4.6 6.6 0.1 2.4 2 0 0 2 2 2 0 Jiraiya NnrU PF07298.11 ORF73316 - 0.014 14.9 2.2 0.065 12.7 0.3 2.4 2 0 0 2 2 2 0 NnrU protein DnaJ PF00226.31 ORF40188 - 3.5e-10 39.8 0.0 2.4e-09 37.2 0.0 2.3 2 0 0 2 2 2 1 DnaJ domain DUF2477 PF10631.9 ORF40188 - 1.6 9.4 3.9 4.4 8.0 0.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2477) LMBR1 PF04791.16 ORF36879 - 9.1e-76 255.8 0.8 1.2e-75 255.4 0.8 1.1 1 0 0 1 1 1 1 LMBR1-like membrane protein DUF2721 PF11026.8 ORF36879 - 5.6 6.9 12.3 2.6 7.9 3.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2721) RNA_pol_Rpb2_6 PF00562.28 ORF28145 - 5.8e-107 358.1 0.1 9.5e-106 354.1 0.1 2.0 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 ORF28145 - 7.3e-17 61.5 0.0 1.6e-16 60.5 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 zf-Sec23_Sec24 PF04810.15 ORF28145 - 0.075 13.1 0.9 0.21 11.7 0.1 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger DZR PF12773.7 ORF28145 - 0.1 12.6 1.3 0.24 11.4 1.3 1.6 1 0 0 1 1 1 0 Double zinc ribbon Zn_ribbon_SprT PF17283.2 ORF28145 - 0.12 12.3 4.2 6 6.9 0.0 2.6 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-ribbon_3 PF13248.6 ORF28145 - 0.16 11.5 1.1 0.23 10.9 0.1 1.8 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_recom PF13408.6 ORF28145 - 0.79 10.3 3.3 0.87 10.2 1.0 2.2 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain SET PF00856.28 ORF10899 - 6.1e-09 36.5 0.0 2.2e-08 34.7 0.0 2.0 2 1 0 2 2 2 1 SET domain PIH1_CS PF18201.1 ORF10899 - 1.3e-06 28.7 0.0 2.5e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 PIH1 CS-like domain Apolipoprotein PF01442.18 ORF96561 - 0.0068 16.3 2.8 0.0068 16.3 2.8 2.9 2 1 1 3 3 3 1 Apolipoprotein A1/A4/E domain Serpentine_r_xa PF03383.15 ORF96561 - 0.081 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Caenorhabditis serpentine receptor-like protein, class xa DUF3921 PF13060.6 ORF96561 - 0.26 11.3 5.4 2.4 8.3 0.5 3.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3921) PIN_8 PF18476.1 ORF96561 - 1 9.2 46.0 1.4 8.7 10.7 3.9 1 1 2 4 4 4 0 PIN like domain Prominin PF05478.11 ORF96561 - 1.1 7.1 28.4 1.7 6.5 3.4 2.5 2 0 0 2 2 2 0 Prominin TipAS PF07739.13 ORF96561 - 4.1 8.0 33.1 4.9 7.7 7.3 5.3 2 2 2 4 4 4 0 TipAS antibiotic-recognition domain YtxH PF12732.7 ORF96561 - 9.3 6.9 43.7 1.1 9.9 5.2 6.1 2 2 1 3 3 3 0 YtxH-like protein Na_sulph_symp PF00939.19 ORF94940 - 2.3e-58 198.4 27.4 3.1e-58 198.0 27.4 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 ORF94940 - 1.8e-34 119.3 13.5 1.8e-34 119.3 13.5 2.2 1 1 1 2 2 2 2 Citrate transporter DctM PF06808.12 ORF94940 - 0.18 10.6 28.7 0.0073 15.2 10.5 2.6 2 1 0 2 2 2 0 Tripartite ATP-independent periplasmic transporter, DctM component HA2 PF04408.23 ORF85198 - 1.3e-20 73.6 0.0 3.1e-20 72.5 0.0 1.6 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 ORF85198 - 2e-18 66.5 0.0 4.3e-18 65.4 0.0 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 ORF85198 - 1.3e-14 54.4 0.0 2.5e-14 53.5 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UQ_con PF00179.26 ORF83752 - 7.8e-06 25.6 0.0 1.7e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme ImpE PF07024.13 ORF83752 - 0.064 13.3 0.0 0.84 9.7 0.0 2.3 2 0 0 2 2 2 0 ImpE protein CENP-F_leu_zip PF10473.9 ORF83752 - 0.18 11.8 0.9 0.74 9.8 0.2 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 NINJA_B PF16136.5 ORF83752 - 2.1 8.7 4.3 16 5.9 0.1 2.8 3 0 0 3 3 3 0 Putative nuclear localisation signal TPR_10 PF13374.6 ORF83039 - 6.1e-78 254.8 24.8 4.7e-12 45.4 0.4 9.8 10 0 0 10 10 9 9 Tetratricopeptide repeat TPR_12 PF13424.6 ORF83039 - 2.2e-65 216.9 26.5 1.4e-16 60.6 3.0 6.9 2 2 5 8 8 8 6 Tetratricopeptide repeat TPR_1 PF00515.28 ORF83039 - 1.6e-22 78.3 6.5 0.014 15.2 0.7 8.4 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_7 PF13176.6 ORF83039 - 1.6e-17 62.1 14.4 0.042 13.9 0.4 8.3 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF83039 - 1.2e-16 59.3 8.6 0.0093 16.0 0.7 7.7 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF83039 - 1.7e-15 57.3 15.5 6.2e-06 25.8 5.3 3.4 1 1 2 3 3 3 3 MalT-like TPR region TPR_16 PF13432.6 ORF83039 - 2.4e-14 53.7 7.9 0.17 12.6 0.0 7.0 6 1 0 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF83039 - 3.2e-11 42.5 4.1 0.22 11.8 0.2 7.3 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF83039 - 3.7e-11 42.5 12.6 0.93 10.3 0.3 8.0 8 0 0 8 8 7 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF83039 - 1.3e-09 38.1 22.2 0.084 13.7 0.4 8.8 11 0 0 11 11 8 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF83039 - 4.6e-09 36.0 6.3 1.1 9.8 0.0 7.0 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_3 PF07720.12 ORF83039 - 9e-08 32.0 0.9 0.18 11.8 0.1 5.0 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF83039 - 5.9e-07 29.9 16.2 0.032 14.7 2.1 5.7 3 1 1 5 5 5 2 Tetratricopeptide repeat PPR PF01535.20 ORF83039 - 0.0029 17.7 0.0 28 5.3 0.0 5.1 6 0 0 6 6 5 0 PPR repeat TPR_5 PF12688.7 ORF83039 - 0.0089 16.3 16.3 0.11 12.7 0.2 3.9 5 1 0 5 5 4 2 Tetratrico peptide repeat ANAPC3 PF12895.7 ORF83039 - 0.011 16.0 5.8 4.1 7.7 0.4 4.4 2 1 3 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 Leuk-A4-hydro_C PF09127.11 ORF83039 - 0.1 12.7 0.1 5.9 7.0 0.0 3.3 3 1 1 4 4 3 0 Leukotriene A4 hydrolase, C-terminal RPN6_N PF18055.1 ORF83039 - 0.16 12.4 5.0 17 5.8 0.3 4.0 1 1 3 5 5 5 0 26S proteasome regulatory subunit RPN6 N-terminal domain Mating_N PF12731.7 ORF83039 - 0.17 12.0 2.1 23 5.2 0.0 3.8 4 0 0 4 4 3 0 Mating-type protein beta 1 DUF4404 PF14357.6 ORF83039 - 0.22 12.2 21.4 1.9 9.2 0.5 6.0 4 2 2 6 6 6 0 Domain of unknown function (DUF4404) PPR_1 PF12854.7 ORF83039 - 0.27 11.0 5.1 11 5.8 0.0 3.7 4 0 0 4 4 4 0 PPR repeat DUF4880 PF16220.5 ORF83039 - 0.4 10.6 3.0 7.9 6.4 0.5 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4880) DUF1841 PF08897.11 ORF83039 - 4.1 7.4 10.4 7.1 6.7 0.4 3.9 2 1 3 5 5 5 0 Domain of unknown function (DUF1841) TPR_11 PF13414.6 ORF83039 - 5.9 6.7 6.3 34 4.2 0.1 3.8 4 0 0 4 4 4 0 TPR repeat KxDL PF10241.9 ORF75538 - 6.4e-05 23.2 2.0 6.4e-05 23.2 2.0 5.1 5 0 0 5 5 5 2 Uncharacterized conserved protein Osmo_CC PF08946.10 ORF75538 - 0.00034 20.8 16.2 0.087 13.1 1.9 4.9 4 0 0 4 4 4 3 Osmosensory transporter coiled coil TMF_DNA_bd PF12329.8 ORF75538 - 0.0016 18.4 10.3 0.0016 18.4 10.3 7.3 5 3 2 7 7 7 1 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 ORF75538 - 0.4 11.0 14.1 12 6.2 3.3 5.1 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DASH_Dam1 PF08653.10 ORF75538 - 0.7 9.7 8.0 4.9 7.0 0.0 4.5 4 1 1 5 5 5 0 DASH complex subunit Dam1 MCPsignal PF00015.21 ORF75538 - 1.6 8.5 16.3 2.6 7.8 0.0 4.6 3 1 2 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF2209 PF09974.9 ORF75538 - 3.9 7.8 8.3 0.28 11.5 0.6 2.8 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2209) C2 PF00168.30 ORF73576 - 4.8e-17 62.1 0.0 9.1e-17 61.2 0.0 1.4 1 0 0 1 1 1 1 C2 domain PHA_synth_III_E PF09712.10 ORF73576 - 0.084 12.0 0.2 0.12 11.4 0.2 1.2 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) KxDL PF10241.9 ORF57371 - 6.4e-05 23.2 2.0 6.4e-05 23.2 2.0 5.1 5 0 0 5 5 5 2 Uncharacterized conserved protein Osmo_CC PF08946.10 ORF57371 - 0.00034 20.8 16.2 0.087 13.1 1.9 4.9 4 0 0 4 4 4 3 Osmosensory transporter coiled coil TMF_DNA_bd PF12329.8 ORF57371 - 0.0016 18.4 10.3 0.0016 18.4 10.3 7.3 5 3 2 7 7 7 1 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 ORF57371 - 0.4 11.0 14.1 12 6.2 3.3 5.1 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DASH_Dam1 PF08653.10 ORF57371 - 0.7 9.7 8.0 4.9 7.0 0.0 4.5 4 1 1 5 5 5 0 DASH complex subunit Dam1 MCPsignal PF00015.21 ORF57371 - 1.6 8.5 16.3 2.6 7.8 0.0 4.6 3 1 2 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF2209 PF09974.9 ORF57371 - 3.9 7.8 8.3 0.28 11.5 0.6 2.8 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2209) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks11.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks11.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks11.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks11.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:46:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- 60KD_IMP PF02096.20 NODE_39591_length_527_cov_323.628049_g32175_i0forward_frame_1 - 0.0034 17.3 0.6 0.0049 16.8 0.6 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein Glyco_hydro_65C PF03633.15 NODE_39587_length_527_cov_31282.890244_g30592_i7forward_frame_1 - 0.56 10.2 1.7 2.1 8.3 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain Orexin_rec2 PF03827.13 NODE_39581_length_528_cov_2.626775_g32167_i0reverse_frame_1 - 0.12 12.4 0.1 0.24 11.4 0.1 1.5 1 0 0 1 1 1 0 Orexin receptor type 2 Joubert PF15392.6 NODE_39558_length_528_cov_124.154158_g32145_i0forward_frame_1 - 1.3 8.7 4.0 1.6 8.4 4.0 1.1 1 0 0 1 1 1 0 Joubert syndrome-associated Glyco_hydro_31 PF01055.26 NODE_39557_length_528_cov_135.860041_g32144_i0forward_frame_1 - 1e-47 163.3 0.0 1.2e-47 163.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 WD40 PF00400.32 NODE_39540_length_529_cov_1.607287_g32129_i0forward_frame_3 - 8.1e-10 39.1 0.7 9e-05 23.2 0.2 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat BTB_2 PF02214.22 NODE_39539_length_529_cov_1.979757_g32128_i0forward_frame_2 - 0.036 14.4 1.2 0.12 12.7 1.2 2.1 1 1 0 1 1 1 0 BTB/POZ domain NIF PF03031.18 NODE_39538_length_529_cov_2.200405_g32127_i0forward_frame_3 - 4.1e-50 169.6 0.2 4.7e-50 169.4 0.2 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Peripla_BP_4 PF13407.6 NODE_39537_length_529_cov_2.216599_g32126_i0forward_frame_3 - 7.7e-16 58.4 0.0 9.7e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 NODE_39537_length_529_cov_2.216599_g32126_i0forward_frame_3 - 2e-06 27.4 0.0 2.4e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family DUF3367 PF11847.8 NODE_39531_length_529_cov_3.876518_g32120_i0forward_frame_3 - 0.36 8.6 2.5 0.46 8.3 2.5 1.1 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase Peptidase_C70 PF12385.8 NODE_39522_length_529_cov_80.016194_g32112_i0forward_frame_3 - 0.099 12.6 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Papain-like cysteine protease AvrRpt2 Stn1 PF10451.9 NODE_39522_length_529_cov_80.016194_g32112_i0forward_frame_3 - 0.11 11.5 0.1 0.15 11.0 0.1 1.2 1 0 0 1 1 1 0 Telomere regulation protein Stn1 UCH PF00443.29 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_3 - 0.055 12.9 1.3 0.069 12.6 1.3 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Zip PF02535.22 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_2 - 0.77 8.9 3.9 0.86 8.8 3.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter PIEZO PF15917.5 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_2 - 2.4 7.6 10.6 3.1 7.2 10.6 1.2 1 0 0 1 1 1 0 Piezo Presenilin PF01080.17 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_2 - 3.6 6.2 8.4 5.1 5.8 8.4 1.2 1 0 0 1 1 1 0 Presenilin Saf_2TM PF18303.1 NODE_39474_length_530_cov_49.224242_g32067_i0forward_frame_3 - 0.37 10.4 2.5 0.49 10.0 2.5 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain EcoRI_methylase PF13651.6 NODE_39471_length_530_cov_72.084848_g32064_i0forward_frame_3 - 0.035 13.3 0.2 0.04 13.2 0.2 1.1 1 0 0 1 1 1 0 Adenine-specific methyltransferase EcoRI Eco57I PF07669.11 NODE_39471_length_530_cov_72.084848_g32064_i0forward_frame_3 - 0.044 14.3 0.2 0.08 13.4 0.2 1.4 1 0 0 1 1 1 0 Eco57I restriction-modification methylase MTS PF05175.14 NODE_39471_length_530_cov_72.084848_g32064_i0forward_frame_3 - 0.052 13.1 0.0 0.089 12.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain WRNPLPNID PF15017.6 NODE_39469_length_530_cov_80.090909_g32062_i0forward_frame_2 - 0.14 13.1 1.0 0.23 12.4 1.0 1.3 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box RRN9 PF10680.9 NODE_39462_length_530_cov_151.492929_g32055_i0reverse_frame_2 - 0.03 14.6 0.1 0.068 13.5 0.1 1.7 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor DUF3332 PF11810.8 NODE_39459_length_530_cov_163.775758_g32052_i0reverse_frame_3 - 0.37 10.4 2.9 0.48 10.0 2.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) zf-UBP_var PF17807.1 NODE_39459_length_530_cov_163.775758_g32052_i0forward_frame_3 - 0.12 12.2 1.5 0.19 11.5 1.5 1.3 1 0 0 1 1 1 0 Variant UBP zinc finger SAM_1 PF00536.30 NODE_39454_length_530_cov_274.781818_g32047_i0forward_frame_3 - 0.085 13.3 0.3 2.1 8.8 0.1 2.1 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) MLANA PF14991.6 NODE_39448_length_530_cov_524.303030_g32041_i0reverse_frame_3 - 0.11 12.8 0.4 0.21 11.9 0.4 1.4 1 0 0 1 1 1 0 Protein melan-A DUF4941 PF16299.5 NODE_39445_length_530_cov_1487.080808_g32039_i0reverse_frame_2 - 0.074 12.4 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4941) DCD PF06559.11 NODE_39432_length_531_cov_3.487903_g32029_i0forward_frame_2 - 1.1e-09 37.6 0.0 2.1e-09 36.7 0.0 1.4 1 1 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) dUTPase PF00692.19 NODE_39432_length_531_cov_3.487903_g32029_i0forward_frame_2 - 1.7e-07 31.0 0.0 2.6e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 dUTPase T4_tail_cap PF11091.8 NODE_39430_length_531_cov_6.508065_g32027_i0reverse_frame_3 - 0.089 11.7 0.0 0.11 11.4 0.0 1.2 1 0 0 1 1 1 0 Tail-tube assembly protein Mitoc_L55 PF09776.9 NODE_39429_length_531_cov_16.207661_g32026_i0forward_frame_3 - 6.7 6.5 9.1 1.1 9.0 3.5 2.0 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L55 V-set_CD47 PF08204.11 NODE_39425_length_531_cov_64.544355_g32022_i0reverse_frame_2 - 0.011 15.7 0.7 0.02 14.8 0.7 1.4 1 0 0 1 1 1 0 CD47 immunoglobulin-like domain MgtE PF01769.16 NODE_39411_length_531_cov_106.340726_g32008_i0forward_frame_2 - 0.071 13.5 8.5 0.04 14.3 6.7 1.6 1 1 0 1 1 1 0 Divalent cation transporter NinF PF05810.12 NODE_39407_length_531_cov_135.235887_g32004_i0reverse_frame_3 - 0.054 13.4 4.0 20 5.2 0.0 3.3 3 0 0 3 3 3 0 NinF protein DUF3079 PF11278.8 NODE_39407_length_531_cov_135.235887_g32004_i0reverse_frame_3 - 0.15 11.9 31.7 0.21 11.4 2.4 4.9 1 1 4 5 5 5 0 Protein of unknown function (DUF3079) NCD1 PF04904.13 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_3 - 0.0035 17.3 1.4 3.6 7.7 0.0 3.5 1 1 3 4 4 4 2 NAB conserved region 1 (NCD1) DUF3400 PF11880.8 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_3 - 0.33 10.5 7.2 65 3.2 0.0 4.6 3 1 2 5 5 5 0 Domain of unknown function (DUF3400) Zn-ribbon_8 PF09723.10 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_2 - 0.25 11.5 2.1 38 4.5 0.4 3.6 2 1 2 4 4 4 0 Zinc ribbon domain Lac_bphage_repr PF06543.12 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_2 - 1.5 8.8 3.1 22 5.1 0.1 3.5 4 0 0 4 4 4 0 Lactococcus bacteriophage repressor MFS_1 PF07690.16 NODE_39406_length_531_cov_143.858871_g32003_i0reverse_frame_3 - 4.1e-06 26.0 1.1 4.4e-06 25.9 1.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily S_4TM PF18159.1 NODE_39406_length_531_cov_143.858871_g32003_i0reverse_frame_3 - 0.019 14.3 1.2 0.026 13.9 0.1 1.7 1 1 1 2 2 2 0 SMODS-associating 4TM effector domain DUF4396 PF14342.6 NODE_39406_length_531_cov_143.858871_g32003_i0reverse_frame_3 - 0.05 14.0 0.2 0.05 14.0 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4396) Peptidase_A24 PF01478.18 NODE_39406_length_531_cov_143.858871_g32003_i0reverse_frame_3 - 0.13 12.6 4.2 1 9.8 0.8 2.1 2 0 0 2 2 2 0 Type IV leader peptidase family DUF4064 PF13273.6 NODE_39406_length_531_cov_143.858871_g32003_i0reverse_frame_3 - 0.21 11.9 15.1 0.79 10.0 15.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) DUF2070 PF09843.9 NODE_39406_length_531_cov_143.858871_g32003_i0reverse_frame_3 - 0.84 7.8 6.2 1.1 7.4 6.2 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TMEM72 PF16054.5 NODE_39406_length_531_cov_143.858871_g32003_i0reverse_frame_3 - 1.3 8.7 5.5 0.21 11.3 1.2 1.7 1 1 1 2 2 2 0 Transmembrane protein family 72 ABC_membrane PF00664.23 NODE_39406_length_531_cov_143.858871_g32003_i0reverse_frame_3 - 2.7 7.6 11.5 3.9 7.0 2.0 2.0 1 1 1 2 2 2 0 ABC transporter transmembrane region ABC2_membrane_3 PF12698.7 NODE_39406_length_531_cov_143.858871_g32003_i0reverse_frame_3 - 3.3 6.7 10.9 4.6 6.3 10.9 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein Glyco_hydro_43 PF04616.14 NODE_39405_length_531_cov_144.022177_g32002_i0forward_frame_3 - 5.2e-16 58.8 0.0 6.6e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 PLAC8 PF04749.17 NODE_39397_length_531_cov_276.437500_g31994_i0reverse_frame_2 - 0.00094 20.1 18.2 0.0021 19.0 18.2 1.7 1 0 0 1 1 1 1 PLAC8 family DsbD_2 PF13386.6 NODE_39397_length_531_cov_276.437500_g31994_i0forward_frame_3 - 0.0015 18.5 0.1 0.002 18.1 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Trefoil PF00088.18 NODE_39390_length_531_cov_1254.417339_g31520_i1forward_frame_2 - 0.034 14.0 0.3 0.063 13.2 0.3 1.4 1 0 0 1 1 1 0 Trefoil (P-type) domain KASH PF10541.9 NODE_39384_length_531_cov_38839.167339_g31984_i0forward_frame_3 - 0.031 14.5 2.1 0.078 13.3 2.1 1.7 1 0 0 1 1 1 0 Nuclear envelope localisation domain KdpA PF03814.15 NODE_39384_length_531_cov_38839.167339_g31984_i0forward_frame_3 - 0.25 9.5 2.5 0.32 9.2 2.5 1.0 1 0 0 1 1 1 0 Potassium-transporting ATPase A subunit HECT PF00632.25 ORF996 - 7.2e-36 124.2 0.1 8e-36 124.1 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) DUF4253 PF14062.6 ORF9807 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) LPD30 PF18850.1 ORF96477 - 0.1 12.4 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Large polyvalent protein associated domain 30 DUF2523 PF10734.9 ORF94721 - 0.029 15.0 1.0 2.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2523) TraS PF10624.9 ORF94721 - 0.043 13.7 0.2 0.065 13.1 0.2 1.2 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS Nucleocapsid-N PF11030.8 ORF94719 - 1.5 8.8 7.2 2.8 7.9 6.9 1.6 1 1 1 2 2 2 0 Nucleocapsid protein N Penaeidin PF05927.11 ORF94229 - 0.066 14.0 0.0 0.15 12.8 0.0 1.6 1 0 0 1 1 1 0 Penaeidin DHO_dh PF01180.21 ORF93000 - 2.9e-08 33.3 0.0 1e-05 24.9 0.0 2.0 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase Peptidase_M23 PF01551.22 ORF91992 - 7.7e-10 38.9 0.1 1.7e-09 37.7 0.1 1.6 1 1 0 1 1 1 1 Peptidase family M23 Biotin_lipoyl PF00364.22 ORF91992 - 0.028 14.2 0.1 0.24 11.3 0.0 2.2 2 0 0 2 2 2 0 Biotin-requiring enzyme RnfC_N PF13375.6 ORF91992 - 0.14 12.1 0.2 0.41 10.6 0.1 1.9 1 1 1 2 2 2 0 RnfC Barrel sandwich hybrid domain Oxysterol_BP PF01237.18 ORF91637 - 1.1e-05 24.5 5.6 4.3e-05 22.5 5.6 1.8 1 1 0 1 1 1 1 Oxysterol-binding protein BBS2_N PF14781.6 ORF90926 - 0.11 12.4 0.0 6 6.8 0.0 2.1 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 2, N-terminal MitMem_reg PF13012.6 ORF89788 - 1.5e-20 73.7 0.3 1.8e-20 73.4 0.3 1.1 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function Laminin_II PF06009.12 ORF89788 - 0.062 13.3 0.0 0.095 12.7 0.0 1.4 1 0 0 1 1 1 0 Laminin Domain II Ribosomal_L5_C PF00673.21 ORF88929 - 2e-20 72.8 0.0 3.8e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF88929 - 1.7e-15 57.1 0.1 2.6e-15 56.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L5 DUF1293 PF06950.11 ORF88929 - 0.094 12.8 0.1 0.81 9.8 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1293) OprD PF03573.13 ORF88929 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 outer membrane porin, OprD family Flavodoxin_2 PF02525.17 ORF88223 - 4.1e-41 140.9 0.0 5e-41 140.6 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 ORF88223 - 1.5e-07 31.3 0.0 2.2e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Skp1_POZ PF03931.15 ORF87955 - 0.088 13.0 0.4 0.21 11.8 0.3 1.6 1 1 0 1 1 1 0 Skp1 family, tetramerisation domain PsbM PF05151.12 ORF87955 - 0.22 11.4 3.5 0.61 9.9 3.5 1.7 1 0 0 1 1 1 0 Photosystem II reaction centre M protein (PsbM) adh_short PF00106.25 ORF87712 - 1.2e-23 83.6 0.0 1.5e-23 83.3 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF87712 - 2.9e-13 49.9 0.0 3.7e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF87712 - 0.0021 18.0 0.0 0.0034 17.3 0.0 1.3 1 0 0 1 1 1 1 KR domain Corona_7 PF02398.16 ORF87189 - 0.1 13.2 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Coronavirus protein 7 7TMR-DISM_7TM PF07695.11 ORF85314 - 0.0013 18.7 11.9 0.0013 18.7 11.9 1.5 2 0 0 2 2 2 1 7TM diverse intracellular signalling 7tm_1 PF00001.21 ORF85314 - 0.002 17.5 0.2 0.003 16.9 0.2 1.3 1 0 0 1 1 1 1 7 transmembrane receptor (rhodopsin family) Sarcoglycan_1 PF04790.13 ORF85314 - 0.044 13.1 0.2 0.044 13.1 0.2 2.2 2 0 0 2 2 2 0 Sarcoglycan complex subunit protein DHHC PF01529.20 ORF85314 - 0.45 10.6 9.9 6.9 6.8 0.1 2.2 1 1 1 2 2 2 0 DHHC palmitoyltransferase Tetraspanin PF00335.20 ORF85314 - 1.2 8.8 4.6 1.5 8.5 4.2 1.5 1 1 0 1 1 1 0 Tetraspanin family OSTbeta PF15048.6 ORF85314 - 1.8 8.8 5.2 0.68 10.1 0.1 2.1 1 1 1 2 2 2 0 Organic solute transporter subunit beta protein DUF2417 PF10329.9 ORF85314 - 6.8 6.0 16.1 41 3.5 14.9 1.9 1 1 1 2 2 2 0 Region of unknown function (DUF2417) CTP_transf_like PF01467.26 ORF84421 - 3.1e-15 56.6 0.0 7.9e-15 55.3 0.0 1.7 2 0 0 2 2 2 1 Cytidylyltransferase-like Ribosomal_L5_C PF00673.21 ORF84027 - 2e-20 72.8 0.0 3.8e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF84027 - 1.6e-15 57.2 0.1 2.6e-15 56.5 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 DUF1293 PF06950.11 ORF84027 - 0.093 12.9 0.1 0.82 9.8 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1293) OprD PF03573.13 ORF84027 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 outer membrane porin, OprD family DUF3120 PF11318.8 ORF8390 - 0.13 12.6 0.1 0.18 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) DUF2085 PF09858.9 ORF83029 - 0.11 13.0 1.5 0.54 10.8 0.9 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2085) MFS_1 PF07690.16 ORF82924 - 6.9e-13 48.2 21.3 8.3e-13 48.0 21.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily UNC-93 PF05978.16 ORF82924 - 0.017 14.8 9.1 0.026 14.2 9.1 1.3 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 GPR_Gpa2_C PF11970.8 ORF82924 - 0.94 9.6 3.9 2.1 8.5 3.9 1.7 1 1 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term Isochorismatase PF00857.20 ORF81934 - 8.5e-21 74.9 0.0 9.5e-21 74.7 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family Ribosomal_S7 PF00177.21 ORF79769 - 1.4e-37 128.7 0.8 1.6e-37 128.4 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ribosomal_L6e PF01159.19 ORF79769 - 0.04 14.5 0.1 0.062 13.8 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L6e Abhydrolase_1 PF00561.20 ORF75350 - 7.5e-07 29.1 0.4 3e-06 27.1 0.4 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF75350 - 0.02 14.1 0.0 0.55 9.5 0.0 2.0 1 1 0 1 1 1 0 Serine aminopeptidase, S33 DUF676 PF05057.14 ORF75350 - 0.021 14.3 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Ras PF00071.22 ORF74510 - 2.4e-41 141.1 0.6 2.8e-41 140.8 0.6 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF74510 - 2.8e-24 85.6 0.1 4.3e-24 85.0 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF74510 - 2.9e-11 43.1 0.1 3.4e-11 42.9 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF74510 - 4e-05 23.1 0.3 5.4e-05 22.7 0.3 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF74510 - 0.00058 19.4 0.0 0.0008 19.0 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF74510 - 0.0035 17.4 0.0 0.0064 16.6 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF74510 - 0.011 15.7 0.2 0.17 11.8 0.0 2.2 1 1 0 2 2 2 0 RsgA GTPase MMR_HSR1_Xtn PF16897.5 ORF74510 - 0.046 13.7 0.1 0.082 12.9 0.1 1.5 1 1 0 1 1 1 0 C-terminal region of MMR_HSR1 domain YwhD PF08741.10 ORF74510 - 0.062 13.0 0.1 0.085 12.5 0.1 1.2 1 0 0 1 1 1 0 YwhD family V_ATPase_I PF01496.19 ORF73041 - 4.3e-37 127.5 0.1 4.8e-37 127.3 0.1 1.1 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Abhydrolase_1 PF00561.20 ORF7254 - 7.5e-07 29.1 0.4 3e-06 27.1 0.4 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF7254 - 0.02 14.1 0.0 0.55 9.5 0.0 2.0 1 1 0 1 1 1 0 Serine aminopeptidase, S33 DUF676 PF05057.14 ORF7254 - 0.021 14.3 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Sec62 PF03839.16 ORF7008 - 1.2 8.5 11.1 1.6 8.2 11.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 FapA PF03961.13 ORF7008 - 1.9 7.0 14.3 2.5 6.6 14.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A TPR_2 PF07719.17 ORF68388 - 0.0019 18.2 0.4 0.0034 17.4 0.4 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF68388 - 0.021 15.0 0.2 0.044 14.0 0.2 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF68388 - 0.03 14.9 0.0 0.057 14.1 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF68388 - 0.12 12.7 0.1 0.19 12.0 0.1 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4364 PF14277.6 ORF68388 - 0.12 12.1 3.5 0.088 12.5 2.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4364) TPR_14 PF13428.6 ORF68388 - 0.18 12.7 0.0 0.32 11.9 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat FAM178 PF14816.6 ORF68388 - 0.6 9.0 4.6 1 8.3 4.6 1.4 1 0 0 1 1 1 0 Family of unknown function, FAM178 CobT PF06213.12 ORF68388 - 3.7 6.9 21.1 0.025 14.0 11.2 1.9 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT DUF4770 PF15994.5 ORF68388 - 5 7.3 9.4 1.2 9.4 3.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4770) TLP-20 PF06088.11 ORF68388 - 6.1 6.7 14.4 6.6 6.6 5.8 2.2 2 0 0 2 2 2 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) Prothymosin PF03247.14 ORF68388 - 6.5 7.3 33.7 0.57 10.7 19.2 2.3 2 0 0 2 2 2 0 Prothymosin/parathymosin family GEN1_C PF18380.1 ORF68388 - 6.9 7.6 15.2 15 6.6 7.9 2.3 2 0 0 2 2 2 0 Holliday junction resolvase Gen1 C-terminal domain Oxysterol_BP PF01237.18 ORF6696 - 1.1e-05 24.5 5.6 4.3e-05 22.5 5.6 1.8 1 1 0 1 1 1 1 Oxysterol-binding protein SVWC PF15430.6 ORF66290 - 0.18 12.1 0.0 0.18 12.1 0.0 2.5 2 1 1 3 3 3 0 Single domain von Willebrand factor type C LDB19 PF13002.7 ORF6324 - 0.18 11.5 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 Arrestin_N terminal like DUF676 PF05057.14 ORF62841 - 1.7e-20 73.5 0.6 3.3e-19 69.3 0.1 2.0 1 1 1 2 2 2 2 Putative serine esterase (DUF676) DHHC PF01529.20 ORF62618 - 2.2e-19 69.9 6.4 4.4e-19 68.9 5.0 1.8 2 0 0 2 2 2 1 DHHC palmitoyltransferase Oxidored_q2 PF00420.24 ORF62618 - 0.097 12.3 0.2 12 5.6 0.1 2.1 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Ribosomal_L5_C PF00673.21 ORF62583 - 2e-20 72.8 0.0 3.8e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF62583 - 1.7e-15 57.1 0.1 2.6e-15 56.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L5 DUF1293 PF06950.11 ORF62583 - 0.094 12.8 0.1 0.81 9.8 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1293) OprD PF03573.13 ORF62583 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 outer membrane porin, OprD family DUF4253 PF14062.6 ORF62462 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) Abhydrolase_1 PF00561.20 ORF62380 - 7.5e-07 29.1 0.4 3e-06 27.1 0.4 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF62380 - 0.02 14.1 0.0 0.55 9.5 0.0 2.0 1 1 0 1 1 1 0 Serine aminopeptidase, S33 DUF676 PF05057.14 ORF62380 - 0.021 14.3 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Smr PF01713.21 ORF61999 - 7.9e-10 39.0 0.0 1.4e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 Smr domain Mak16 PF04874.14 ORF61999 - 0.032 14.8 3.2 0.046 14.3 3.2 1.2 1 0 0 1 1 1 0 Mak16 protein C-terminal region DUF1285 PF06938.11 ORF61999 - 0.077 13.0 0.2 0.14 12.2 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1285) FeS_assembly_P PF01883.19 ORF61742 - 3.8e-14 52.6 0.0 8.2e-14 51.5 0.0 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein PRONE PF03759.13 ORF58711 - 0.0023 16.8 2.8 0.0027 16.6 2.8 1.2 1 0 0 1 1 1 1 PRONE (Plant-specific Rop nucleotide exchanger) HXXSHH PF07586.11 ORF58711 - 0.013 15.1 1.0 0.016 14.8 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1552) FAM150 PF15129.6 ORF58711 - 0.12 12.6 5.5 0.2 11.8 5.5 1.5 1 1 0 1 1 1 0 FAM150 family RGM_C PF06534.13 ORF58072 - 0.004 16.7 0.1 0.0058 16.2 0.1 1.1 1 0 0 1 1 1 1 Repulsive guidance molecule (RGM) C-terminus Ribosomal_L5_C PF00673.21 ORF57110 - 2e-20 72.8 0.0 3.8e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF57110 - 1.7e-15 57.1 0.1 2.6e-15 56.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L5 DUF1293 PF06950.11 ORF57110 - 0.094 12.8 0.1 0.81 9.8 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1293) OprD PF03573.13 ORF57110 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 outer membrane porin, OprD family DUF4256 PF14066.6 ORF56778 - 0.091 12.4 0.1 0.21 11.2 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4256) TLD PF07534.16 ORF56648 - 5.8e-10 39.5 0.0 7.9e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 TLD Ribosomal_60s PF00428.19 ORF56648 - 7.6 7.2 12.7 3.6 8.3 10.3 1.7 1 1 1 2 2 2 0 60s Acidic ribosomal protein DUF4116 PF13475.6 ORF56350 - 2.4e-17 62.4 0.0 3.3e-08 33.1 0.0 3.0 2 1 1 3 3 3 3 Domain of unknown function (DUF4116) Mid1 PF12929.7 ORF56350 - 0.24 10.6 0.0 0.31 10.2 0.0 1.1 1 0 0 1 1 1 0 Stretch-activated Ca2+-permeable channel component PMAIP1 PF15150.6 ORF56181 - 0.06 13.2 0.9 0.16 11.8 0.9 1.8 1 0 0 1 1 1 0 Phorbol-12-myristate-13-acetate-induced PEP-utilisers_N PF05524.13 ORF55632 - 1.3e-15 57.6 0.4 2.2e-15 56.9 0.4 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, N-terminal PEP-utilizers PF00391.23 ORF55632 - 1.2e-14 53.7 0.0 2e-14 53.0 0.0 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain ER_lumen_recept PF00810.18 ORF54382 - 0.35 11.7 2.8 0.21 12.4 1.1 1.5 2 0 0 2 2 2 0 ER lumen protein retaining receptor DUF4253 PF14062.6 ORF53879 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) OrfB_Zn_ribbon PF07282.11 ORF53877 - 0.029 14.3 0.2 0.081 12.9 0.2 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Mcm10 PF09332.11 ORF53877 - 0.21 11.0 5.3 0.27 10.6 5.3 1.1 1 0 0 1 1 1 0 Mcm10 replication factor Exo70 PF03081.15 ORF51900 - 0.19 10.8 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Exo70 exocyst complex subunit DUF1499 PF07386.11 ORF51801 - 9e-09 35.9 0.0 1.8e-08 35.0 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1499) 7TM_GPCR_Srw PF10324.9 ORF51801 - 0.013 14.8 0.2 0.013 14.8 0.2 1.3 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srw PEP-utilizers_C PF02896.18 ORF51801 - 0.049 12.7 0.1 0.065 12.3 0.1 1.1 1 0 0 1 1 1 0 PEP-utilising enzyme, TIM barrel domain Sel1 PF08238.12 ORF50846 - 0.00038 21.0 0.1 0.00062 20.4 0.1 1.4 1 0 0 1 1 1 1 Sel1 repeat SecM PF06558.12 ORF50846 - 0.032 14.3 0.1 0.86 9.7 0.0 2.2 1 1 1 2 2 2 0 Secretion monitor precursor protein (SecM) Aminotran_4 PF01063.19 ORF46866 - 3.2e-12 46.8 0.0 3.9e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV DUF3446 PF11928.8 ORF46753 - 8.7 6.7 27.2 5.4 7.4 7.2 2.4 1 1 1 2 2 2 0 Early growth response N-terminal domain Arf PF00025.21 ORF4577 - 7.2e-09 35.3 0.2 2.1e-08 33.8 0.2 1.7 1 1 0 1 1 1 1 ADP-ribosylation factor family zf-C2H2_assoc PF16606.5 ORF44816 - 2.9 8.2 9.5 10 6.4 4.3 2.2 2 0 0 2 2 2 0 Unstructured conserved, between two C2H2-type zinc-fingers HECT PF00632.25 ORF43714 - 7.2e-36 124.2 0.1 8e-36 124.1 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Asp PF00026.23 ORF43166 - 6.7e-14 52.0 0.1 8.3e-14 51.7 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF43166 - 0.00043 20.1 0.0 0.00069 19.4 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal gag-asp_proteas PF13975.6 ORF43166 - 0.16 12.6 0.0 0.32 11.6 0.0 1.5 1 0 0 1 1 1 0 gag-polyprotein putative aspartyl protease YebG PF07130.12 ORF42743 - 0.018 14.9 2.0 0.089 12.7 0.1 2.3 2 0 0 2 2 2 0 YebG protein Methyltransf_4 PF02390.17 ORF42627 - 1.2e-09 37.9 0.0 2.6e-09 36.8 0.0 1.5 1 1 0 1 1 1 1 Putative methyltransferase Aldedh PF00171.22 ORF40430 - 6.4e-37 127.1 0.0 7.1e-37 127.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family MMS19_N PF14500.6 ORF40430 - 0.098 12.2 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Mcm10 PF09332.11 ORF40411 - 0.021 14.2 13.1 0.028 13.9 13.1 1.1 1 0 0 1 1 1 0 Mcm10 replication factor Skp1 PF01466.19 ORF39539 - 6.5e-13 48.6 0.3 6.5e-13 48.6 0.3 1.8 2 0 0 2 2 2 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF39539 - 1.9e-06 27.9 0.6 4.1e-06 26.9 0.6 1.5 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain BTB PF00651.31 ORF39539 - 0.0085 16.3 0.1 3.5 7.9 0.0 2.3 1 1 1 2 2 2 2 BTB/POZ domain PRKCSH_1 PF13015.6 ORF37116 - 1.6e-09 37.6 0.1 2e-09 37.3 0.1 1.1 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein PRKCSH PF07915.13 ORF37116 - 0.0025 18.8 0.5 0.0056 17.7 0.5 1.5 1 1 0 1 1 1 1 Glucosidase II beta subunit-like protein Pyr_redox_2 PF07992.14 ORF3416 - 2.8e-19 69.5 1.1 3.3e-19 69.2 1.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF3416 - 9.8e-09 35.5 0.0 5.2e-08 33.1 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Myosin_N PF02736.19 ORF3416 - 0.03 14.1 0.7 0.06 13.2 0.7 1.4 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain Aminotran_4 PF01063.19 ORF31666 - 3.2e-12 46.8 0.0 3.9e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV Lebercilin PF15619.6 ORF31583 - 0.0089 15.7 26.4 0.015 15.0 10.6 2.6 1 1 1 2 2 2 2 Ciliary protein causing Leber congenital amaurosis disease TEX12 PF15219.6 ORF31583 - 0.43 10.9 9.5 0.096 13.0 3.5 2.3 2 1 0 2 2 2 0 Testis-expressed 12 NYD-SP28 PF14772.6 ORF31583 - 1.9 8.6 21.8 0.14 12.2 8.5 3.4 1 1 2 3 3 3 0 Sperm tail Uso1_p115_C PF04871.13 ORF31583 - 3.4 8.1 20.6 0.9 9.9 6.8 2.3 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Fib_alpha PF08702.10 ORF31583 - 6.3 7.0 24.5 2.1 8.5 7.2 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF4446 PF14584.6 ORF31583 - 6.8 6.7 15.6 0.54 10.2 5.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) DUF4253 PF14062.6 ORF3073 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) Halogen_Hydrol PF10112.9 ORF29007 - 1.8 8.6 6.7 2.4 8.1 6.8 1.4 1 1 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF2070 PF09843.9 ORF29007 - 2.1 6.5 5.8 2.4 6.4 5.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FIN1 PF17300.2 ORF27821 - 0.012 15.1 0.7 0.015 14.8 0.7 1.2 1 0 0 1 1 1 0 Filaments in between nuclei protein-1 Aminotran_4 PF01063.19 ORF27163 - 3.2e-12 46.8 0.0 3.9e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV LRR_4 PF12799.7 ORF27062 - 3.8e-06 27.1 0.9 5.7e-05 23.4 0.1 2.6 1 1 0 2 2 2 1 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF27062 - 3.6e-05 23.3 0.1 5.2e-05 22.8 0.1 1.3 1 0 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 ORF27062 - 0.00019 21.1 0.9 0.00045 19.9 0.9 1.7 1 0 0 1 1 1 1 Leucine rich repeat MFS_1 PF07690.16 ORF26690 - 6.9e-13 48.2 21.3 8.3e-13 48.0 21.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily UNC-93 PF05978.16 ORF26690 - 0.017 14.8 9.1 0.026 14.2 9.1 1.3 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 GPR_Gpa2_C PF11970.8 ORF26690 - 0.94 9.6 3.9 2.1 8.5 3.9 1.7 1 1 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term S-methyl_trans PF02574.16 ORF22401 - 1.1e-40 140.2 0.6 1.2e-40 140.1 0.6 1.0 1 0 0 1 1 1 1 Homocysteine S-methyltransferase DUF3921 PF13060.6 ORF21471 - 0.0074 16.3 0.2 0.016 15.2 0.2 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3921) TatD_DNase PF01026.21 ORF20674 - 7.1e-34 117.3 0.0 7.9e-34 117.2 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase DUF3967 PF13152.6 ORF2002 - 0.055 13.3 0.5 0.14 12.0 0.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3967) DUF572 PF04502.13 ORF2002 - 1.3 8.6 6.5 1.5 8.4 6.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) DUF2085 PF09858.9 ORF19754 - 0.11 13.0 1.5 0.54 10.8 0.9 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2085) Abhydrolase_2 PF02230.16 ORF19677 - 5.7e-26 91.7 0.0 6.5e-26 91.5 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 ORF19677 - 1.8e-09 37.2 0.1 0.001 18.4 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 ORF19677 - 5.6e-09 36.2 0.2 4.8e-05 23.3 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold DLH PF01738.18 ORF19677 - 4.2e-06 26.5 0.0 5.7e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF19677 - 4.5e-06 26.3 0.1 0.036 13.6 0.0 2.1 1 1 1 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF19677 - 1.2e-05 25.1 0.1 0.0001 22.1 0.1 1.9 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF19677 - 0.00021 22.0 8.4 0.00091 19.9 8.4 1.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 ORF19677 - 0.0018 18.0 0.0 0.0021 17.8 0.0 1.2 1 0 0 1 1 1 1 Putative esterase AXE1 PF05448.12 ORF19677 - 0.0033 16.2 0.1 0.005 15.6 0.1 1.2 1 0 0 1 1 1 1 Acetyl xylan esterase (AXE1) DUF2974 PF11187.8 ORF19677 - 0.043 13.4 0.0 0.062 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) LIP PF03583.14 ORF19677 - 0.05 12.9 0.0 5.1 6.3 0.0 2.1 2 0 0 2 2 2 0 Secretory lipase Esterase_phd PF10503.9 ORF19677 - 0.082 12.4 0.4 1.4 8.3 0.1 2.1 1 1 1 2 2 2 0 Esterase PHB depolymerase Sec62 PF03839.16 ORF19475 - 1.2 8.5 11.1 1.6 8.2 11.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 FapA PF03961.13 ORF19475 - 1.9 7.0 14.3 2.5 6.6 14.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A CTP_transf_like PF01467.26 ORF19305 - 3.1e-15 56.6 0.0 7.9e-15 55.3 0.0 1.7 2 0 0 2 2 2 1 Cytidylyltransferase-like Asp PF00026.23 ORF19229 - 6.7e-14 52.0 0.1 8.3e-14 51.7 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF19229 - 0.00043 20.1 0.0 0.00069 19.4 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal gag-asp_proteas PF13975.6 ORF19229 - 0.16 12.6 0.0 0.32 11.6 0.0 1.5 1 0 0 1 1 1 0 gag-polyprotein putative aspartyl protease TPR_19 PF14559.6 ORF17910 - 0.0018 18.8 5.1 0.0035 17.8 0.0 3.1 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF17910 - 0.64 11.0 10.9 0.38 11.7 1.9 4.0 3 2 1 4 4 4 0 Tetratricopeptide repeat DUF3416 PF11896.8 ORF17910 - 3.9 7.7 7.5 0.86 9.9 3.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3416) Pox_RNA_Pol_19 PF05320.12 ORF17878 - 0.028 14.4 1.9 0.044 13.8 1.9 1.3 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit Pkinase PF00069.25 ORF16617 - 3.8e-30 105.1 0.2 4.2e-30 105.0 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF16617 - 4.1e-17 62.3 0.1 4.7e-17 62.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF16617 - 3.4e-05 23.5 0.0 5.8e-05 22.8 0.0 1.4 1 1 0 1 1 1 1 RIO1 family Pox_ser-thr_kin PF05445.11 ORF16617 - 0.0032 16.5 0.1 0.0038 16.3 0.1 1.2 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase YrbL-PhoP_reg PF10707.9 ORF16617 - 0.014 14.9 0.2 0.38 10.3 0.0 2.3 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL APH PF01636.23 ORF16617 - 0.047 13.6 0.0 0.063 13.2 0.0 1.3 1 1 0 1 1 1 0 Phosphotransferase enzyme family GBP_repeat PF02526.14 ORF16617 - 0.22 11.2 1.0 2.1 8.1 0.1 2.4 2 0 0 2 2 2 0 Glycophorin-binding protein Ribosomal_L36 PF00444.18 ORF16496 - 5.2e-05 23.4 6.0 8.5e-05 22.7 6.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L36 Pyrophosphatase PF00719.19 ORF16486 - 3.1e-56 189.6 0.0 3.5e-56 189.5 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase InPase PF18823.1 ORF16486 - 0.027 14.2 0.1 0.08 12.6 0.0 1.7 2 0 0 2 2 2 0 Inorganic Pyrophosphatase AbfS_sensor PF18225.1 ORF16456 - 0.1 12.5 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain Pkinase PF00069.25 ORF13592 - 4.9e-44 150.7 0.1 5.4e-44 150.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13592 - 5.3e-26 91.5 0.0 5.8e-26 91.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF13592 - 0.00036 19.4 0.0 0.00049 19.0 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF13592 - 0.0043 16.4 0.0 0.0056 16.1 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF13592 - 0.0084 15.5 0.1 0.049 12.9 0.0 1.8 1 1 1 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF13592 - 0.091 11.7 0.7 0.13 11.2 0.7 1.2 1 1 0 1 1 1 0 Haspin like kinase domain TTL PF03133.15 ORF13527 - 2.5e-14 53.1 0.3 3.3e-14 52.7 0.3 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF13527 - 0.00025 20.4 0.0 0.00033 20.0 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF13527 - 0.001 18.4 0.0 0.0017 17.7 0.0 1.4 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF13527 - 0.046 13.3 0.0 0.073 12.6 0.0 1.4 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus NOA36 PF06524.12 ORF13527 - 8.8 5.5 11.2 11 5.3 11.2 1.2 1 0 0 1 1 1 0 NOA36 protein CDC4_D PF16856.5 ORF13427 - 0.2 11.6 5.3 2.2 8.2 0.1 3.3 2 1 1 3 3 3 0 Cell division control protein 4 dimerisation domain PDZ_2 PF13180.6 ORF13416 - 3.1e-09 37.0 0.1 8.1e-09 35.7 0.0 1.7 2 0 0 2 2 2 1 PDZ domain Nas2_N PF18265.1 ORF13416 - 2.8e-07 30.4 1.7 5.2e-07 29.5 1.0 1.7 2 0 0 2 2 2 1 Nas2 N_terminal domain PDZ_6 PF17820.1 ORF13416 - 3.2e-07 30.1 1.2 5.8e-07 29.2 0.1 2.1 3 0 0 3 3 3 1 PDZ domain PDZ PF00595.24 ORF13416 - 7.5e-06 26.2 0.2 1.7e-05 25.0 0.1 1.7 2 0 0 2 2 2 1 PDZ domain GRASP55_65 PF04495.14 ORF13416 - 0.0032 17.8 0.0 0.0063 16.8 0.0 1.5 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain DUF1484 PF07363.11 ORF12203 - 0.042 14.8 0.5 0.042 14.8 0.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1484) MFS_1 PF07690.16 ORF11245 - 0.0001 21.3 17.3 0.00012 21.1 2.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF11245 - 0.0064 14.9 6.4 0.007 14.8 6.4 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector 2OG-FeII_Oxy_3 PF13640.6 ORF111109 - 2.6e-18 66.7 0.0 3.3e-18 66.4 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF111109 - 3.7e-09 37.1 0.0 5.1e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily RRM_1 PF00076.22 ORF110830 - 8.3e-10 38.4 0.1 1.4e-09 37.6 0.1 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF3192 PF11399.8 ORF110830 - 0.096 12.6 0.4 0.16 11.9 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3192) RL PF17797.1 ORF110830 - 0.12 12.4 0.0 0.31 11.0 0.0 1.8 1 0 0 1 1 1 0 RL domain DUF4253 PF14062.6 ORF109317 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) 2Fe-2S_thioredx PF01257.19 ORF108614 - 1.2e-40 138.7 0.2 1.6e-40 138.3 0.2 1.1 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin U3snoRNP10 PF12397.8 ORF108614 - 0.024 15.0 0.0 0.043 14.2 0.0 1.4 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 10 PLDc PF00614.22 ORF108613 - 2.9e-05 24.0 0.3 5.2e-05 23.2 0.3 1.4 1 0 0 1 1 1 1 Phospholipase D Active site motif PLDc_2 PF13091.6 ORF108613 - 0.0086 16.0 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 1 PLD-like domain DUF4212 PF13937.6 ORF108216 - 0.19 12.1 2.6 0.27 11.6 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) PsaX PF08078.12 ORF108216 - 0.36 10.8 7.3 4.3 7.4 3.6 2.8 2 2 0 2 2 2 0 PsaX family CoxIIa PF08113.11 ORF108216 - 7.1 6.5 6.8 2 8.3 2.5 2.1 2 0 0 2 2 2 0 Cytochrome c oxidase subunit IIa family DUF4253 PF14062.6 ORF107992 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) DUF1722 PF08349.11 ORF107865 - 0.17 12.2 3.2 2 8.7 0.2 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF1722) DUF4200 PF13863.6 ORF105086 - 2.2e-18 66.8 35.6 2.2e-18 66.8 35.6 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4200) DUF948 PF06103.11 ORF105086 - 0.044 14.0 4.0 0.39 11.0 4.0 2.2 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DNA_pack_N PF02500.15 ORF105086 - 0.076 12.8 6.8 0.02 14.7 3.0 1.7 1 1 1 2 2 2 0 Probable DNA packing protein, N-terminus DUF4407 PF14362.6 ORF105086 - 0.46 9.8 9.8 0.6 9.4 9.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GIDA_assoc PF13932.6 ORF105086 - 0.47 10.6 16.6 0.73 10.0 16.4 1.4 1 1 0 1 1 1 0 GidA associated domain OmpH PF03938.14 ORF105086 - 1 9.7 28.6 2.3 8.5 21.0 2.3 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) TAF8_C PF10406.9 ORF105086 - 1.2 9.8 6.4 4.9 7.8 1.2 2.7 2 0 0 2 2 2 0 Transcription factor TFIID complex subunit 8 C-term DUF1465 PF07323.12 ORF105086 - 1.9 8.3 11.6 0.18 11.7 5.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1465) Mit_KHE1 PF10173.9 ORF105086 - 4.8 7.2 12.6 10 6.1 12.6 1.7 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related KIF1B PF12423.8 ORF105086 - 5.4 7.5 9.7 3.6 8.1 0.6 2.9 3 0 0 3 3 3 0 Kinesin protein 1B DUF2523 PF10734.9 ORF104804 - 0.029 15.0 1.0 2.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2523) TraS PF10624.9 ORF104804 - 0.044 13.7 0.2 0.065 13.1 0.2 1.2 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS YebG PF07130.12 ORF103771 - 0.017 15.0 2.0 0.089 12.7 0.1 2.4 2 0 0 2 2 2 0 YebG protein PHD PF00628.29 ORF103496 - 0.00019 21.3 11.2 0.00043 20.1 11.2 1.6 1 0 0 1 1 1 1 PHD-finger PGI PF00342.19 ORF102831 - 1.2e-36 126.4 0.1 1.4e-36 126.2 0.1 1.1 1 0 0 1 1 1 1 Phosphoglucose isomerase DUF2666 PF10869.8 ORF102831 - 0.01 16.1 0.9 0.015 15.5 0.5 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2666) GatB_Yqey PF02637.18 ORF102831 - 0.032 14.1 0.2 0.04 13.8 0.2 1.4 1 0 0 1 1 1 0 GatB domain EpoR_lig-bind PF09067.10 ORF102762 - 0.072 13.3 0.7 0.13 12.4 0.5 1.5 1 1 0 1 1 1 0 Erythropoietin receptor, ligand binding AmpE PF17113.5 ORF10272 - 6e-106 354.0 4.7 6.6e-106 353.8 4.7 1.0 1 0 0 1 1 1 1 Regulatory signalling modulator protein AmpE MLTD_N PF06474.12 ORF10272 - 0.26 11.5 0.7 0.89 9.8 0.0 2.2 2 0 0 2 2 2 0 MltD lipid attachment motif Alpha_kinase PF02816.18 ORF101730 - 5.7e-15 55.9 1.7 9.1e-15 55.2 1.7 1.3 1 0 0 1 1 1 1 Alpha-kinase family Ribosomal_S21 PF01165.20 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_1 - 0.089 12.5 0.3 0.97 9.2 0.0 2.2 1 1 1 2 2 2 0 Ribosomal protein S21 Pribosyltran PF00156.27 NODE_39843_length_523_cov_3.747951_g32412_i0forward_frame_1 - 0.00028 20.4 0.0 0.00046 19.7 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Geminin PF07412.12 NODE_39839_length_523_cov_20.469262_g32408_i0reverse_frame_1 - 0.014 15.2 0.5 0.014 15.2 0.5 2.0 2 0 0 2 2 2 0 Geminin GUCT PF08152.12 NODE_39836_length_523_cov_69.965164_g32405_i0forward_frame_1 - 0.0019 18.4 0.0 0.0026 18.0 0.0 1.2 1 0 0 1 1 1 1 GUCT (NUC152) domain DbpA PF03880.15 NODE_39836_length_523_cov_69.965164_g32405_i0forward_frame_1 - 0.073 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 DbpA RNA binding domain DUF802 PF05650.11 NODE_39828_length_523_cov_90.295082_g32397_i0forward_frame_1 - 6.2 7.4 8.4 8.5 6.9 0.4 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF802) Pedibin PF08182.11 NODE_39794_length_524_cov_1.439673_g32366_i0reverse_frame_1 - 5.1 7.0 17.5 1.8 8.4 4.2 2.7 1 1 1 2 2 2 0 Pedibin/Hym-346 family MFS_1 PF07690.16 NODE_39790_length_524_cov_2.386503_g32362_i0reverse_frame_1 - 3.6e-09 36.0 19.0 3.6e-09 36.0 19.0 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily CPP1-like PF11833.8 NODE_39790_length_524_cov_2.386503_g32362_i0reverse_frame_1 - 0.87 9.2 3.4 0.74 9.4 2.5 1.4 1 1 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Phage_holin_5_2 PF16079.5 NODE_39790_length_524_cov_2.386503_g32362_i0forward_frame_1 - 0.11 12.8 1.1 0.54 10.6 0.2 2.2 2 0 0 2 2 2 0 Phage holin family Hol44, in holin superfamily V T3SS_basalb_I PF17001.5 NODE_39789_length_524_cov_2.398773_g32361_i0forward_frame_1 - 0.014 16.0 0.9 0.037 14.6 0.9 1.8 1 1 0 1 1 1 0 Type III secretion basal body protein I, YscI, HrpB, PscI Caudo_TAP PF02413.17 NODE_39789_length_524_cov_2.398773_g32361_i0forward_frame_1 - 0.047 13.8 0.1 0.067 13.3 0.1 1.3 1 0 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK HTH_6 PF01418.17 NODE_39788_length_524_cov_2.578732_g32360_i0reverse_frame_1 - 6.1e-06 26.1 0.0 1.5e-05 24.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family ABC2_membrane PF01061.24 NODE_39787_length_524_cov_2.584867_g32359_i0forward_frame_1 - 1.9e-30 105.9 21.8 2.1e-30 105.7 21.8 1.0 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 NODE_39787_length_524_cov_2.584867_g32359_i0forward_frame_1 - 0.02 14.0 26.8 0.015 14.4 22.0 2.0 1 1 1 2 2 2 0 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 NODE_39787_length_524_cov_2.584867_g32359_i0forward_frame_1 - 0.64 9.2 14.7 1.1 8.4 14.7 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein Gp_dh_N PF00044.24 NODE_39785_length_524_cov_2.775051_g32357_i0forward_frame_1 - 8.5e-25 87.0 0.2 1.2e-24 86.5 0.2 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 NODE_39785_length_524_cov_2.775051_g32357_i0forward_frame_1 - 0.0014 18.8 0.0 0.002 18.3 0.0 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 2-Hacid_dh_C PF02826.19 NODE_39785_length_524_cov_2.775051_g32357_i0forward_frame_1 - 0.0088 15.4 0.0 0.014 14.8 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF5411 PF17424.2 NODE_39783_length_524_cov_2.850716_g32355_i0reverse_frame_1 - 0.062 13.3 0.7 0.65 10.0 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5411) TRAP_beta PF05753.14 NODE_39783_length_524_cov_2.850716_g32355_i0reverse_frame_1 - 0.096 12.1 0.1 1.6 8.1 0.0 2.1 2 0 0 2 2 2 0 Translocon-associated protein beta (TRAPB) EphA2_TM PF14575.6 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_1 - 0.0032 18.3 1.0 0.0041 18.0 0.2 1.6 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain DUF3357 PF11837.8 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_1 - 0.012 16.1 0.3 0.012 16.1 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3357) ODV-E18 PF10717.9 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_1 - 0.033 14.1 3.8 0.033 14.1 3.8 2.5 2 1 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Orf78 PF06024.12 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_1 - 0.093 13.0 0.4 0.17 12.2 0.4 1.5 1 0 0 1 1 1 0 Orf78 (ac78) Shisa PF13908.6 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_1 - 1.2 9.3 6.2 0.25 11.6 0.7 2.1 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator CTP_synth_N PF06418.14 NODE_39776_length_524_cov_4.098160_g32348_i0reverse_frame_1 - 1.2e-82 277.2 0.1 1.3e-82 277.1 0.1 1.0 1 0 0 1 1 1 1 CTP synthase N-terminus NapE PF06796.11 NODE_39770_length_524_cov_67.235174_g32342_i0forward_frame_1 - 0.36 10.4 0.0 0.36 10.4 0.0 2.8 4 0 0 4 4 4 0 Periplasmic nitrate reductase protein NapE KI67R PF08065.12 NODE_39758_length_524_cov_97.944785_g32331_i0reverse_frame_1 - 0.069 13.7 0.3 0.069 13.7 0.3 2.0 1 1 1 2 2 2 0 KI67R (NUC007) repeat Ank_2 PF12796.7 NODE_39748_length_524_cov_133.126789_g32321_i0reverse_frame_1 - 2.7e-09 37.5 1.2 5.7e-07 30.0 1.3 2.1 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_39748_length_524_cov_133.126789_g32321_i0reverse_frame_1 - 5.8e-09 36.3 0.1 0.00015 22.2 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_39748_length_524_cov_133.126789_g32321_i0reverse_frame_1 - 4.3e-07 30.1 0.1 0.0028 18.0 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_39748_length_524_cov_133.126789_g32321_i0reverse_frame_1 - 6.8e-07 29.1 0.0 0.0017 18.7 0.0 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 NODE_39748_length_524_cov_133.126789_g32321_i0reverse_frame_1 - 0.00059 20.2 0.0 0.028 14.9 0.0 3.0 3 0 0 3 3 3 1 Ankyrin repeat DUF3073 PF11273.8 NODE_39723_length_525_cov_3.204082_g24812_i1reverse_frame_1 - 0.21 12.3 0.0 0.39 11.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) MFS_1 PF07690.16 NODE_39717_length_525_cov_15.687755_g32294_i0reverse_frame_1 - 1.6e-07 30.6 3.9 1.9e-07 30.3 3.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TypeIII_RM_meth PF12564.8 NODE_39717_length_525_cov_15.687755_g32294_i0forward_frame_1 - 0.44 10.7 4.5 0.91 9.7 4.5 1.4 1 0 0 1 1 1 0 Type III restriction/modification enzyme methylation subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks120.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks120.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks120.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks120.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2536 PF10750.9 NODE_39686_length_525_cov_446.232653_g32265_i0forward_frame_1 - 0.11 12.5 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2536) TonB_C PF03544.14 NODE_39680_length_526_cov_2.158859_g32260_i0forward_frame_3 - 1.9e-19 69.9 0.1 2.8e-19 69.3 0.1 1.2 1 0 0 1 1 1 1 Gram-negative bacterial TonB protein C-terminal TonB_N PF16031.5 NODE_39680_length_526_cov_2.158859_g32260_i0forward_frame_3 - 0.0027 18.2 4.7 0.0045 17.5 4.7 1.4 1 0 0 1 1 1 1 TonB polyproline region TonB_2 PF13103.6 NODE_39680_length_526_cov_2.158859_g32260_i0forward_frame_3 - 0.082 13.2 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 TonB C terminal Sigma70_r4 PF04545.16 NODE_39670_length_526_cov_68.046843_g32250_i0reverse_frame_3 - 1.4e-18 66.1 0.4 2.3e-18 65.4 0.4 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_25 PF13413.6 NODE_39670_length_526_cov_68.046843_g32250_i0reverse_frame_3 - 0.08 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain IL6 PF00489.17 NODE_39663_length_526_cov_106.026477_g32243_i0reverse_frame_2 - 0.00013 21.6 0.9 0.0003 20.4 0.9 1.5 1 0 0 1 1 1 1 Interleukin-6/G-CSF/MGF family DUF1759 PF03564.15 NODE_39663_length_526_cov_106.026477_g32243_i0reverse_frame_2 - 0.048 13.6 1.7 0.1 12.5 1.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1759) eRF1_3 PF03465.15 NODE_39663_length_526_cov_106.026477_g32243_i0reverse_frame_2 - 0.092 13.2 0.4 0.13 12.7 0.4 1.3 1 0 0 1 1 1 0 eRF1 domain 3 RNA_polI_A34 PF08208.11 NODE_39651_length_526_cov_163.804481_g32232_i0reverse_frame_3 - 0.092 12.8 32.9 0.032 14.3 23.6 2.1 2 0 0 2 2 2 0 DNA-directed RNA polymerase I subunit RPA34.5 SAPS PF04499.15 NODE_39651_length_526_cov_163.804481_g32232_i0reverse_frame_3 - 0.92 8.2 10.3 1.1 8.0 10.3 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Presenilin PF01080.17 NODE_39651_length_526_cov_163.804481_g32232_i0reverse_frame_3 - 1.1 7.9 7.3 1.3 7.7 7.3 1.1 1 0 0 1 1 1 0 Presenilin Wzy_C PF04932.15 NODE_39651_length_526_cov_163.804481_g32232_i0forward_frame_3 - 7.9 6.1 10.1 0.78 9.4 3.5 2.0 2 0 0 2 2 2 0 O-Antigen ligase DUF884 PF05959.11 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_3 - 0.014 15.1 0.1 12 5.5 0.0 3.5 1 1 3 4 4 4 0 Nucleopolyhedrovirus protein of unknown function (DUF884) HD_5 PF13487.6 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_3 - 0.57 10.5 6.9 98 3.3 0.0 4.6 2 1 2 5 5 5 0 HD domain Haem_bd PF14376.6 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_3 - 2.4 8.1 10.1 2.7 7.9 0.3 2.7 1 1 1 3 3 3 0 Haem-binding domain Sulfotransfer_1 PF00685.27 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_2 - 0.052 13.0 0.0 15 5.0 0.0 2.9 2 1 0 2 2 2 0 Sulfotransferase domain PknG_rubred PF16919.5 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_3 - 0.038 14.2 0.0 41 4.3 0.0 3.3 4 0 0 4 4 4 0 Protein kinase G rubredoxin domain IncFII_repA PF02387.15 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_3 - 0.047 12.9 10.1 11 5.2 0.1 4.6 4 1 0 5 5 5 0 IncFII RepA protein family Pam17 PF08566.10 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_3 - 0.42 10.5 9.6 0.33 10.8 2.1 2.6 1 1 2 3 3 3 0 Mitochondrial import protein Pam17 HCV_NS5a_1a PF08300.13 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_3 - 0.51 10.5 3.8 3 8.0 0.1 3.0 1 1 3 4 4 4 0 Hepatitis C virus non-structural 5a zinc finger domain RCC1_2 PF13540.6 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 1.3e-42 142.7 29.5 6.8e-12 44.9 1.2 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 1.7e-14 54.2 35.9 0.15 12.7 0.1 8.1 6 2 2 8 8 8 8 Regulator of chromosome condensation (RCC1) repeat DUF5125 PF17163.4 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.0013 18.9 0.1 0.47 10.6 0.0 3.2 1 1 3 4 4 4 1 Domain of unknown function (DUF5125) FAF PF11250.8 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.041 14.1 0.0 66 3.9 0.0 3.6 4 0 0 4 4 4 0 Fantastic Four meristem regulator TBP PF00352.21 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.043 13.8 0.0 19 5.3 0.0 3.5 2 1 2 4 4 4 0 Transcription factor TFIID (or TATA-binding protein, TBP) PLDc PF00614.22 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.046 13.9 0.0 3.2 8.1 0.0 3.1 3 0 0 3 3 3 0 Phospholipase D Active site motif UL73_N PF12522.8 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.22 11.3 10.8 17 5.2 0.1 4.1 4 0 0 4 4 4 0 Cytomegalovirus glycoprotein N terminal Kelch_4 PF13418.6 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.31 11.1 6.8 63 3.7 0.1 4.1 4 0 0 4 4 4 0 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.89 9.6 4.1 52 4.0 0.1 3.7 4 0 0 4 4 4 0 Kelch motif DUF1451 PF07295.11 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 2.4 8.2 3.9 11 6.0 0.1 2.7 3 0 0 3 3 3 0 Zinc-ribbon containing domain NPP1 PF05630.11 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 4 7.5 8.2 60 3.7 0.1 3.7 1 1 1 3 3 3 0 Necrosis inducing protein (NPP1) His_Phos_1 PF00300.22 NODE_39634_length_527_cov_3.040650_g32216_i0reverse_frame_3 - 2e-06 27.6 0.0 2.9e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) AMP_N PF05195.16 NODE_39634_length_527_cov_3.040650_g32216_i0forward_frame_3 - 0.13 12.0 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Aminopeptidase P, N-terminal domain NUP50 PF08911.11 NODE_39627_length_527_cov_12.719512_g32209_i0reverse_frame_2 - 0.16 12.6 0.0 0.26 12.0 0.0 1.3 1 0 0 1 1 1 0 NUP50 (Nucleoporin 50 kDa) YMF19 PF02326.15 NODE_39614_length_527_cov_82.126016_g32196_i0reverse_frame_2 - 0.3 11.9 4.7 0.28 12.0 3.6 1.6 1 1 0 1 1 1 0 Plant ATP synthase F0 PDCD2_C PF04194.13 NODE_39614_length_527_cov_82.126016_g32196_i0forward_frame_3 - 6.8e-09 36.0 0.6 2.5e-08 34.2 0.0 1.9 1 1 1 2 2 2 1 Programmed cell death protein 2, C-terminal putative domain C2-set PF05790.15 NODE_39602_length_527_cov_135.993902_g32186_i0reverse_frame_2 - 2.4 8.4 7.2 0.54 10.5 1.5 2.5 2 1 0 2 2 2 0 Immunoglobulin C2-set domain Erf4 PF10256.9 NODE_39591_length_527_cov_323.628049_g32175_i0reverse_frame_2 - 4.3e-05 23.6 0.1 7.8e-05 22.8 0.1 1.5 1 1 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family DUF3981 PF13139.6 NODE_39587_length_527_cov_31282.890244_g30592_i7forward_frame_2 - 0.0018 18.6 1.5 0.0028 18.0 1.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF3981) IMS_C PF11799.8 NODE_39583_length_528_cov_2.458418_g32169_i0reverse_frame_3 - 0.0031 18.2 0.1 0.0037 17.9 0.1 1.3 1 1 0 1 1 1 1 impB/mucB/samB family C-terminal domain DUF4907 PF16250.5 NODE_39583_length_528_cov_2.458418_g32169_i0reverse_frame_3 - 0.04 13.8 0.1 0.094 12.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4907) TBP PF00352.21 NODE_39583_length_528_cov_2.458418_g32169_i0reverse_frame_3 - 0.14 12.1 0.0 0.51 10.3 0.0 1.9 2 1 0 2 2 2 0 Transcription factor TFIID (or TATA-binding protein, TBP) Pkinase PF00069.25 NODE_39582_length_528_cov_2.472617_g32168_i0reverse_frame_3 - 1.9e-11 43.9 3.2 3.4e-10 39.7 3.2 2.0 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_39582_length_528_cov_2.472617_g32168_i0reverse_frame_3 - 7.6e-10 38.5 0.3 1.2e-09 37.9 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Molybdopterin PF00384.22 NODE_39581_length_528_cov_2.626775_g32167_i0forward_frame_2 - 9.6e-27 94.0 0.0 1.2e-26 93.7 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase STIL_N PF15253.6 NODE_39580_length_528_cov_2.711968_g32166_i0reverse_frame_2 - 0.01 14.9 0.0 0.098 11.6 0.0 1.9 2 0 0 2 2 2 0 SCL-interrupting locus protein N-terminus CBP_GIL PF10995.8 NODE_39577_length_528_cov_3.066937_g32163_i0reverse_frame_2 - 1.1e-38 133.2 0.0 1.3e-38 133.0 0.0 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis GIL VWA_2 PF13519.6 NODE_39577_length_528_cov_3.066937_g32163_i0reverse_frame_2 - 0.05 14.3 0.0 0.075 13.7 0.0 1.2 1 0 0 1 1 1 0 von Willebrand factor type A domain Antimicrobial19 PF08225.11 NODE_39569_length_528_cov_68.075051_g32156_i0forward_frame_2 - 0.021 14.4 0.0 0.069 12.8 0.0 2.0 1 0 0 1 1 1 0 Pseudin antimicrobial peptide YqfQ PF14181.6 NODE_39563_length_528_cov_101.811359_g32150_i0reverse_frame_3 - 0.077 13.2 0.6 0.11 12.7 0.6 1.1 1 0 0 1 1 1 0 YqfQ-like protein DUF459 PF04311.13 NODE_39563_length_528_cov_101.811359_g32150_i0reverse_frame_2 - 0.0087 15.1 0.4 0.011 14.7 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF459) Crp PF00325.20 NODE_39558_length_528_cov_124.154158_g32145_i0forward_frame_2 - 0.16 11.6 0.2 0.73 9.5 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family DUF4455 PF14643.6 ORF98813 - 0.0036 16.0 0.5 0.0045 15.7 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4455) DUF4529 PF15032.6 ORF98813 - 0.0069 15.5 1.6 0.0081 15.3 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4529) DUF5344 PF17279.2 ORF98813 - 0.37 11.4 4.7 0.87 10.2 2.5 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5344) Peptidase_C3 PF00548.20 ORF95465 - 0.0086 16.0 0.1 0.012 15.6 0.1 1.3 1 0 0 1 1 1 1 3C cysteine protease (picornain 3C) Methyltransf_28 PF02636.17 ORF95465 - 0.0099 15.5 0.1 0.012 15.3 0.1 1.3 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase MobB PF03205.14 ORF94685 - 1.3e-49 167.5 0.0 1.5e-49 167.3 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 ORF94685 - 0.016 14.8 0.0 0.028 14.0 0.0 1.8 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF94685 - 0.087 13.1 0.1 0.14 12.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain CbiA PF01656.23 ORF94685 - 0.21 11.6 0.2 0.44 10.6 0.1 1.8 1 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain Cys_rich_FGFR PF00839.17 ORF92926 - 0.0023 18.1 4.1 0.017 15.3 0.3 2.9 2 1 1 3 3 3 1 Cysteine rich repeat Dicer_dimer PF03368.14 ORF92926 - 0.06 13.5 0.0 0.06 13.5 0.0 1.6 2 0 0 2 2 2 0 Dicer dimerisation domain Ribosomal_L2_C PF03947.18 ORF92926 - 0.07 13.3 0.1 0.098 12.9 0.1 1.2 1 0 0 1 1 1 0 Ribosomal Proteins L2, C-terminal domain dsrm PF00035.26 ORF92926 - 0.098 13.4 0.1 0.098 13.4 0.1 2.2 2 0 0 2 2 2 0 Double-stranded RNA binding motif Symplekin_C PF12295.8 ORF92837 - 9.5e-34 117.1 0.1 1.1e-33 116.8 0.1 1.1 1 0 0 1 1 1 1 Symplekin tight junction protein C terminal p450 PF00067.22 ORF92734 - 2.7e-31 108.8 0.0 2.9e-31 108.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 TAFA PF12020.8 ORF9064 - 0.014 15.8 0.1 0.023 15.1 0.1 1.3 1 0 0 1 1 1 0 TAFA family Fer4_6 PF12837.7 ORF90392 - 6.4e-14 51.3 40.2 4.8e-07 29.6 2.6 4.6 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.27 ORF90392 - 5.3e-13 48.2 42.8 6.6e-08 32.1 3.2 5.9 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_9 PF13187.6 ORF90392 - 1.3e-11 44.4 51.9 2.9e-06 27.3 10.1 3.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF90392 - 6.4e-11 42.7 35.7 5.7e-07 30.0 12.1 3.0 2 2 2 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF90392 - 2.1e-10 40.0 37.3 3e-05 23.9 2.3 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_11 PF13247.6 ORF90392 - 4.9e-10 39.4 23.6 4.5e-08 33.1 6.8 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF90392 - 6e-09 35.9 36.1 3.7e-06 27.0 11.4 3.9 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF90392 - 1.6e-07 32.1 30.5 0.0052 17.7 4.2 4.6 3 1 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 ORF90392 - 8.7e-07 29.5 46.1 0.0056 17.5 6.2 4.5 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_4 PF12800.7 ORF90392 - 2.1e-05 24.7 41.6 8.5e-05 22.8 4.2 5.2 4 2 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 ORF90392 - 2.4e-05 24.4 35.8 0.0017 18.4 12.5 3.7 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF90392 - 0.00024 21.5 34.0 0.055 13.9 11.2 3.3 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF90392 - 0.024 15.2 2.1 0.024 15.2 2.1 4.4 1 1 5 6 6 6 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 ORF90392 - 0.88 9.4 37.1 0.55 10.0 3.6 4.1 1 1 3 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ETF_QO PF05187.13 ORF90392 - 1.6 8.9 15.3 7.3 6.8 6.4 2.8 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_15 PF13459.6 ORF90392 - 2 9.2 26.6 0.75 10.6 9.1 3.2 2 2 0 2 2 2 0 4Fe-4S single cluster domain DUF4441 PF14536.6 ORF89626 - 0.00083 19.5 12.0 0.0021 18.2 12.1 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4441) Piezo_RRas_bdg PF12166.8 ORF88431 - 2.5e-34 119.3 1.2 3e-34 119.1 1.2 1.1 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF1422 PF07226.11 ORF88431 - 0.035 14.1 2.6 2.1 8.4 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1422) PsbP PF01789.16 ORF84921 - 2.6e-09 37.4 0.0 3.3e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 PsbP C1_2 PF03107.16 ORF84842 - 0.0081 16.5 3.4 0.017 15.4 3.4 1.5 1 0 0 1 1 1 1 C1 domain Zf_RING PF16744.5 ORF84842 - 0.029 14.5 1.5 0.053 13.6 1.5 1.4 1 0 0 1 1 1 0 KIAA1045 RING finger PHD_2 PF13831.6 ORF84842 - 0.041 13.5 4.7 0.052 13.1 0.9 2.2 1 1 1 2 2 2 0 PHD-finger DZR PF12773.7 ORF84842 - 0.069 13.2 0.4 0.11 12.5 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon RecR PF02132.15 ORF84842 - 0.33 10.6 2.7 0.67 9.6 2.7 1.5 1 0 0 1 1 1 0 RecR protein NOB1_Zn_bind PF08772.11 ORF84842 - 0.52 10.5 4.8 2.1 8.5 4.9 2.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-H2C2_2 PF13465.6 ORF84842 - 1.1 9.8 6.9 2.8 8.5 0.3 3.0 3 0 0 3 3 3 0 Zinc-finger double domain NAF PF03822.14 ORF84515 - 0.15 12.3 3.6 9 6.6 0.3 2.7 1 1 2 3 3 3 0 NAF domain DHHC PF01529.20 ORF81298 - 2.4e-16 60.1 1.0 3.2e-16 59.7 1.0 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase RAMP4 PF06624.12 ORF80759 - 0.74 9.9 4.2 13 6.0 0.1 2.7 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 ATP-synt_B PF00430.18 ORF80369 - 1.1e-10 41.7 18.5 2.9e-10 40.3 18.5 1.6 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) V-ATPase_G PF03179.15 ORF80369 - 0.0068 16.9 16.6 0.0094 16.5 16.6 1.2 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit KMP11 PF03037.16 ORF80369 - 0.016 16.0 4.3 0.64 10.8 1.7 2.1 1 1 1 2 2 2 0 Kinetoplastid membrane protein 11 Apolipoprotein PF01442.18 ORF80369 - 0.055 13.3 17.8 10 5.9 1.5 1.9 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Neur_chan_memb PF02932.16 ORF80369 - 0.08 13.0 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3584 PF12128.8 ORF80369 - 0.084 10.4 11.5 0.1 10.1 11.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Phage_GPO PF05929.11 ORF80369 - 0.15 11.6 11.8 0.2 11.2 11.8 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF2228 PF10228.9 ORF80369 - 0.18 11.5 5.9 0.25 11.0 3.4 1.9 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2228) DUF885 PF05960.11 ORF80369 - 0.18 11.4 9.2 0.22 11.1 9.2 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) Phage_TAC_4 PF08748.11 ORF80369 - 0.28 11.5 6.9 0.44 10.9 6.9 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone CDC73_N PF16050.5 ORF80369 - 0.51 9.6 10.5 0.62 9.3 10.5 1.1 1 0 0 1 1 1 0 Paf1 complex subunit CDC73 N-terminal Presenilin PF01080.17 ORF80369 - 0.63 8.7 5.0 0.8 8.4 5.0 1.2 1 0 0 1 1 1 0 Presenilin PIN_8 PF18476.1 ORF80369 - 0.74 9.6 6.1 1 9.2 6.1 1.2 1 0 0 1 1 1 0 PIN like domain TP53IP5 PF15331.6 ORF80369 - 0.81 9.8 4.3 1 9.5 4.3 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 Nup88 PF10168.9 ORF80369 - 1 7.1 8.2 1.3 6.7 8.2 1.0 1 0 0 1 1 1 0 Nuclear pore component EC042_2821 PF18740.1 ORF80369 - 1.1 9.1 4.3 1.4 8.8 4.3 1.2 1 0 0 1 1 1 0 EC042_2821-lke REase YtxH PF12732.7 ORF80369 - 1.1 9.8 14.6 2.4 8.8 10.3 2.5 1 1 1 2 2 2 0 YtxH-like protein OTU PF02338.19 ORF80369 - 1.4 9.4 3.8 4 7.9 0.3 2.1 1 1 1 2 2 2 0 OTU-like cysteine protease DUF883 PF05957.13 ORF80369 - 1.5 9.4 14.7 2.3 8.9 9.1 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF2229 PF09989.9 ORF80369 - 1.7 8.2 4.4 2.3 7.8 4.4 1.2 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) TMPIT PF07851.13 ORF80369 - 1.9 7.7 6.7 2.4 7.3 6.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Atg14 PF10186.9 ORF80369 - 2.3 7.2 6.8 3 6.8 6.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1682 PF07946.14 ORF80369 - 3.9 6.6 12.7 4.6 6.4 12.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) DUF3138 PF11336.8 ORF80369 - 8.2 4.9 8.8 9.5 4.7 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) MORN PF02493.20 ORF8010 - 4.1e-15 54.7 21.8 5.8e-07 29.0 1.1 5.1 5 0 0 5 5 5 4 MORN repeat DUF3048_C PF17479.2 ORF8010 - 0.0023 18.3 3.1 0.044 14.2 3.1 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3048) C-terminal domain dsRBD2 PF17842.1 ORF8000 - 4.6 7.4 8.8 12 6.1 7.9 2.0 1 1 0 1 1 1 0 Double-stranded RNA binding domain 2 p450 PF00067.22 ORF75599 - 1.7e-29 102.9 0.0 1.9e-29 102.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 T3SSipB PF16535.5 ORF75112 - 0.0014 19.1 1.9 0.002 18.6 1.9 1.2 1 1 0 1 1 1 1 Type III cell invasion protein SipB CK2S PF15011.6 ORF75112 - 0.002 18.0 9.9 0.0025 17.7 6.4 2.4 1 1 1 2 2 2 1 Casein Kinase 2 substrate DUF1664 PF07889.12 ORF75112 - 0.0034 17.4 4.2 0.13 12.3 0.4 2.3 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) RNA12 PF10443.9 ORF75112 - 0.0053 15.5 2.6 0.006 15.4 2.6 1.1 1 0 0 1 1 1 1 RNA12 protein Prominin PF05478.11 ORF75112 - 0.012 13.6 1.1 0.014 13.4 1.1 1.1 1 0 0 1 1 1 0 Prominin MCPsignal PF00015.21 ORF75112 - 0.012 15.4 4.6 0.82 9.5 0.5 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain GAS PF13851.6 ORF75112 - 0.038 13.3 7.7 0.064 12.6 7.1 1.7 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding BAR PF03114.18 ORF75112 - 0.081 12.6 4.9 0.1 12.2 4.9 1.2 1 0 0 1 1 1 0 BAR domain KxDL PF10241.9 ORF75112 - 0.13 12.6 4.9 4.5 7.6 0.7 2.8 1 1 2 3 3 3 0 Uncharacterized conserved protein HMMR_N PF15905.5 ORF75112 - 0.16 11.5 10.6 0.24 10.9 7.3 1.9 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF948 PF06103.11 ORF75112 - 0.22 11.8 1.5 4.7 7.6 0.3 2.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) ArAE_2_N PF10337.9 ORF75112 - 0.25 10.4 1.4 0.29 10.1 1.4 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal DUF5082 PF16888.5 ORF75112 - 0.34 11.2 8.2 0.12 12.6 4.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) AAA_32 PF13654.6 ORF75112 - 0.36 9.6 8.8 0.58 8.9 7.0 1.8 1 1 1 2 2 2 0 AAA domain Spc7 PF08317.11 ORF75112 - 0.38 9.6 12.5 0.97 8.3 12.4 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein Mt_ATP-synt_D PF05873.12 ORF75112 - 0.47 10.3 2.5 2.1 8.2 0.6 2.2 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) DUF883 PF05957.13 ORF75112 - 0.62 10.7 7.8 1.1 9.8 3.3 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Atg14 PF10186.9 ORF75112 - 0.83 8.7 8.9 1.1 8.3 8.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF641 PF04859.12 ORF75112 - 1.2 9.5 8.7 5.8 7.3 0.7 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Fib_alpha PF08702.10 ORF75112 - 1.9 8.7 5.8 26 5.0 2.0 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family PRKG1_interact PF15898.5 ORF75112 - 2.1 9.3 11.6 0.42 11.5 4.2 2.1 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Exonuc_VII_L PF02601.15 ORF75112 - 3.7 7.0 10.0 5.8 6.4 10.0 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF1843 PF08898.10 ORF75112 - 3.9 8.0 5.9 6.9 7.3 0.5 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF1843) V_ATPase_I PF01496.19 ORF75112 - 4.2 5.2 6.7 6.3 4.6 4.3 1.8 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family TMPIT PF07851.13 ORF75112 - 6.8 5.8 8.8 10 5.2 4.1 2.0 1 1 1 2 2 2 0 TMPIT-like protein TMF_DNA_bd PF12329.8 ORF75112 - 7 6.7 8.8 4.1 7.5 1.9 2.9 1 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding CorA PF01544.18 ORF75112 - 8.5 5.6 9.4 1.5 8.0 2.3 1.9 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein DUF2937 PF11157.8 ORF75112 - 8.9 6.0 7.1 3.7 7.2 3.9 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2937) Peptidase_C3 PF00548.20 ORF74376 - 0.018 15.0 0.3 0.024 14.6 0.3 1.2 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) DUF1846 PF08903.11 ORF73634 - 0.017 13.7 0.3 0.039 12.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1846) Helicase_C PF00271.31 ORF66877 - 0.15 12.4 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 Helicase conserved C-terminal domain FlaC_arch PF05377.11 ORF63169 - 0.029 14.8 6.0 0.087 13.2 1.9 2.7 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF3450 PF11932.8 ORF63169 - 0.04 13.2 4.9 0.051 12.9 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ACD PF16671.5 ORF63169 - 0.079 11.3 0.1 0.12 10.7 0.1 1.3 1 0 0 1 1 1 0 Actin cross-linking domain LMBR1 PF04791.16 ORF63169 - 0.14 11.0 3.4 0.15 10.9 3.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DivIC PF04977.15 ORF63169 - 0.78 9.5 8.6 18 5.2 8.6 2.4 1 1 0 1 1 1 0 Septum formation initiator UPF0242 PF06785.11 ORF63169 - 1.8 8.6 14.5 0.29 11.2 10.3 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus KLRAQ PF10205.9 ORF63169 - 2.9 8.2 11.9 0.37 11.0 7.7 1.8 2 1 0 2 2 2 0 Predicted coiled-coil domain-containing protein bZIP_1 PF00170.21 ORF63169 - 3.2 7.9 12.0 0.15 12.2 3.0 2.8 2 1 1 3 3 3 0 bZIP transcription factor DUF1846 PF08903.11 ORF62024 - 0.017 13.7 0.3 0.039 12.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1846) PD40 PF07676.12 ORF61596 - 0.041 13.8 0.0 7.5 6.6 0.0 2.6 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat ANAPC4_WD40 PF12894.7 ORF61596 - 0.19 12.0 0.0 3.3 8.1 0.0 2.5 1 1 2 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain Pkinase PF00069.25 ORF59657 - 8.1e-26 91.0 0.0 9.9e-26 90.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF59657 - 9.9e-16 57.8 0.0 1.3e-15 57.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF59657 - 1.1e-07 31.4 0.0 1.6e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Kinase-like DUF2015 PF09435.10 ORF59657 - 0.11 12.4 0.2 0.25 11.2 0.2 1.6 1 1 1 2 2 2 0 Fungal protein of unknown function (DUF2015) AAA PF00004.29 ORF59431 - 2e-12 47.6 0.0 2.9e-12 47.1 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 ORF59431 - 4.6e-08 33.2 0.0 7.4e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain DNA_pol3_delta2 PF13177.6 ORF59431 - 9.7e-07 28.7 0.4 6e-05 22.9 0.0 2.5 2 1 0 2 2 2 1 DNA polymerase III, delta subunit AAA_16 PF13191.6 ORF59431 - 4e-06 27.3 0.0 1.4e-05 25.5 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 ORF59431 - 1.3e-05 25.2 1.7 1.7e-05 24.7 0.0 1.9 1 1 1 2 2 2 1 AAA domain DUF815 PF05673.13 ORF59431 - 3.1e-05 23.3 0.0 3.9e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 ORF59431 - 3.9e-05 23.9 0.1 0.0029 17.9 0.1 2.2 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.12 ORF59431 - 4.9e-05 23.1 0.0 8.6e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 ORF59431 - 0.00014 21.9 0.0 0.00023 21.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 ORF59431 - 0.00037 19.9 0.0 0.0018 17.7 0.0 1.9 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 ORF59431 - 0.00044 20.3 0.0 0.00093 19.2 0.0 1.6 1 1 1 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF59431 - 0.001 18.8 0.0 0.002 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 ORF59431 - 0.0018 18.3 0.0 0.0058 16.6 0.0 1.7 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit AAA_24 PF13479.6 ORF59431 - 0.002 17.9 0.4 0.0043 16.8 0.0 1.8 2 1 0 2 2 2 1 AAA domain AAA_19 PF13245.6 ORF59431 - 0.0023 18.3 0.3 0.013 15.9 0.3 2.0 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF59431 - 0.0037 17.8 0.0 0.015 15.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain DUF2075 PF09848.9 ORF59431 - 0.0054 16.0 0.2 0.022 14.0 0.0 2.0 2 1 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF59431 - 0.0069 15.9 0.0 0.0094 15.5 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region TIP49 PF06068.13 ORF59431 - 0.012 14.8 0.1 0.041 13.1 0.0 1.9 1 1 1 2 2 2 0 TIP49 P-loop domain AAA_28 PF13521.6 ORF59431 - 0.016 15.4 0.1 0.032 14.5 0.0 1.7 2 1 0 2 2 1 0 AAA domain ATPase_2 PF01637.18 ORF59431 - 0.017 15.1 0.1 0.038 13.9 0.0 1.6 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea Kinesin PF00225.23 ORF59431 - 0.018 14.0 0.0 0.021 13.8 0.0 1.1 1 0 0 1 1 1 0 Kinesin motor domain AAA_3 PF07726.11 ORF59431 - 0.022 14.6 0.0 0.047 13.5 0.0 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 ORF59431 - 0.022 14.6 0.1 3.2 7.5 0.0 2.2 1 1 1 2 2 2 0 DEAD/DEAH box helicase TniB PF05621.11 ORF59431 - 0.024 14.1 0.0 0.17 11.3 0.0 2.0 2 0 0 2 2 2 0 Bacterial TniB protein PhoH PF02562.16 ORF59431 - 0.025 14.1 0.6 0.53 9.7 0.0 2.4 1 1 2 3 3 3 0 PhoH-like protein ABC_tran PF00005.27 ORF59431 - 0.04 14.4 0.3 0.18 12.3 0.0 2.1 1 1 1 2 2 2 0 ABC transporter RNA_helicase PF00910.22 ORF59431 - 0.042 14.2 0.0 0.12 12.8 0.0 1.7 1 1 0 1 1 1 0 RNA helicase AAA_6 PF12774.7 ORF59431 - 0.06 12.3 0.0 0.083 11.8 0.0 1.2 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Sigma54_activat PF00158.26 ORF59431 - 0.091 12.5 0.0 5.2 6.7 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 ORF59431 - 0.092 12.5 0.3 0.49 10.1 0.3 2.0 1 1 0 1 1 1 0 IstB-like ATP binding protein DAP3 PF10236.9 ORF59431 - 0.11 11.6 0.2 0.46 9.6 0.0 1.9 1 1 1 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 IPT PF01745.16 ORF59431 - 0.15 11.4 0.0 0.26 10.6 0.0 1.3 1 0 0 1 1 1 0 Isopentenyl transferase AAA_33 PF13671.6 ORF59431 - 0.2 11.8 0.7 0.22 11.7 0.1 1.7 2 1 0 2 2 1 0 AAA domain Peptidase_C3 PF00548.20 ORF58352 - 0.077 12.9 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) DPCD PF14913.6 ORF57364 - 0.11 11.8 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 DPCD protein family Methyltransf_32 PF13679.6 ORF56897 - 4.1e-08 33.4 0.4 5.5e-08 33.0 0.4 1.3 1 0 0 1 1 1 1 Methyltransferase domain EF-hand_7 PF13499.6 ORF55124 - 2.4e-14 53.5 0.0 4e-14 52.8 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF55124 - 1.9e-13 48.9 0.1 2.2e-05 23.7 0.5 2.4 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF55124 - 1.4e-11 44.0 0.4 3.4e-05 23.6 0.1 2.5 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF55124 - 1.3e-09 37.1 0.0 1.9e-05 23.9 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF55124 - 3.9e-09 35.7 0.1 8.4e-05 22.2 0.0 2.4 1 1 1 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF55124 - 2.1e-07 31.2 0.2 2.8e-07 30.8 0.2 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF55124 - 3.1e-05 22.7 0.0 3.6e-05 22.5 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5580) EF-hand_11 PF08976.11 ORF55124 - 0.00019 22.2 0.1 0.0003 21.6 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF55124 - 0.0018 18.2 0.1 0.0045 16.9 0.1 1.6 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF55124 - 0.0027 18.0 0.1 0.0073 16.6 0.0 1.7 2 0 0 2 2 2 1 EF-hand domain Dockerin_1 PF00404.18 ORF55124 - 0.0078 16.4 0.4 2.4 8.4 0.0 2.3 2 0 0 2 2 2 2 Dockerin type I domain EF-hand_10 PF14788.6 ORF55124 - 0.008 16.0 0.0 0.54 10.2 0.1 2.2 1 1 1 2 2 2 2 EF hand TerB PF05099.13 ORF55124 - 0.01 15.8 0.5 0.022 14.7 0.5 1.5 1 1 0 1 1 1 0 Tellurite resistance protein TerB Ribosomal_L27_C PF18471.1 ORF55124 - 0.013 14.9 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal L27 protein C-terminal domain DSPc PF00782.20 ORF55104 - 0.00064 19.5 0.0 0.00083 19.2 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain AAA_9 PF12781.7 ORF54886 - 0.077 12.1 0.2 1.4 8.0 0.3 2.1 1 1 0 1 1 1 0 ATP-binding dynein motor region Ribosomal_L6e PF01159.19 ORF50939 - 0.071 13.6 3.5 0.12 12.9 3.3 1.6 1 1 0 1 1 1 0 Ribosomal protein L6e CNOT1_TTP_bind PF16417.5 ORF47622 - 0.038 13.2 0.1 0.038 13.2 0.1 2.0 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Fibrillarin_2 PF10113.9 ORF47622 - 0.051 12.2 0.1 0.069 11.8 0.1 1.1 1 0 0 1 1 1 0 Fibrillarin-like archaeal protein Casc1_N PF15927.5 ORF47622 - 0.057 13.1 4.0 0.8 9.4 4.0 2.1 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus Pkinase PF00069.25 ORF4588 - 1.1e-05 24.9 0.7 1.8e-05 24.3 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain DUF4755 PF15947.5 ORF4588 - 0.19 11.7 3.3 0.68 9.9 3.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4755) MORN PF02493.20 ORF45268 - 6.5e-36 120.1 46.7 1.9e-09 36.9 0.6 7.0 8 0 0 8 8 8 6 MORN repeat FTR PF01913.18 ORF45268 - 0.051 13.5 0.0 0.095 12.6 0.0 1.4 1 1 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase DUF3048_C PF17479.2 ORF45268 - 0.81 10.1 11.7 6.6 7.2 0.3 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Methyltransf_28 PF02636.17 ORF43623 - 0.0092 15.6 0.1 0.011 15.4 0.1 1.3 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Peptidase_C3 PF00548.20 ORF43623 - 0.015 15.2 0.2 0.021 14.7 0.2 1.2 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) Glutaredoxin2_C PF04399.13 ORF42165 - 2.3e-38 131.0 0.0 2.7e-38 130.7 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin 2, C terminal domain GST_N_3 PF13417.6 ORF42165 - 0.0063 16.9 0.0 0.017 15.5 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF42165 - 0.025 14.6 0.0 0.058 13.4 0.0 1.6 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Peptidase_C3 PF00548.20 ORF41639 - 0.077 12.9 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) CPBP PF02517.16 ORF41591 - 0.0001 22.6 9.4 0.0001 22.6 9.4 1.9 2 0 0 2 2 2 1 CPBP intramembrane metalloprotease PGA2 PF07543.12 ORF41591 - 0.34 10.9 0.5 0.5 10.3 0.5 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 Phage_holin_3_6 PF07332.11 ORF41591 - 9.4 6.3 7.3 5.4 7.1 2.0 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III WD40 PF00400.32 ORF40691 - 2.5e-12 47.1 0.2 0.0011 19.7 0.1 4.5 4 1 0 4 4 4 4 WD domain, G-beta repeat nec1 PF10379.9 ORF40691 - 0.029 13.9 0.0 0.044 13.3 0.0 1.4 1 0 0 1 1 1 0 Virulence protein nec1 DUF3389 PF11869.8 ORF40691 - 0.16 12.1 0.0 0.82 9.9 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3389) Aldedh PF00171.22 ORF40293 - 3.6e-65 220.3 0.1 3.9e-65 220.1 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Pirin_C PF05726.13 ORF38577 - 1.3e-21 76.9 0.0 2.4e-21 76.0 0.0 1.4 2 0 0 2 2 2 1 Pirin C-terminal cupin domain IER PF05760.12 ORF37209 - 0.2 12.0 1.1 0.23 11.8 1.1 1.1 1 0 0 1 1 1 0 Immediate early response protein (IER) DUF4738 PF15889.5 ORF35896 - 0.012 15.4 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4738) zf-RING_2 PF13639.6 ORF35049 - 6.6e-10 39.2 6.9 9.9e-10 38.6 6.9 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF35049 - 1.9e-06 27.6 6.8 3.6e-06 26.7 6.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF35049 - 2.6e-06 27.3 3.2 5.1e-06 26.4 3.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF35049 - 7.4e-06 25.6 5.4 1.9e-05 24.3 5.4 1.7 1 0 0 1 1 1 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF35049 - 1.8e-05 24.3 4.6 3.4e-05 23.4 4.6 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF35049 - 2.1e-05 24.4 5.1 3.4e-05 23.7 5.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF35049 - 0.00012 22.3 7.7 0.00034 20.8 7.7 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain FANCL_C PF11793.8 ORF35049 - 0.00016 21.8 6.4 0.0004 20.5 6.4 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 ORF35049 - 0.00037 20.3 6.5 0.00082 19.2 6.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF35049 - 0.002 18.2 3.8 0.0044 17.1 3.8 1.6 1 1 0 1 1 1 1 RING-variant domain zf-C3HC4_3 PF13920.6 ORF35049 - 0.0036 17.1 3.7 0.0056 16.5 3.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF35049 - 0.01 15.7 5.3 0.017 15.0 5.3 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF35049 - 0.011 15.9 4.1 0.022 14.9 4.1 1.6 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF35049 - 0.012 15.6 4.3 0.045 13.8 4.3 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zinc_ribbon_9 PF14369.6 ORF35049 - 0.041 14.2 1.1 0.11 12.8 0.3 2.0 2 0 0 2 2 2 0 zinc-ribbon zf-HC5HC2H_2 PF13832.6 ORF35049 - 0.052 13.7 3.6 0.063 13.4 2.4 1.8 1 1 0 1 1 1 0 PHD-zinc-finger like domain PHD PF00628.29 ORF35049 - 0.056 13.3 5.9 0.11 12.5 5.9 1.5 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 ORF35049 - 0.23 11.4 7.1 0.16 11.9 1.1 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 S-methyl_trans PF02574.16 ORF3273 - 3.3e-23 82.8 0.3 3.8e-23 82.7 0.3 1.0 1 0 0 1 1 1 1 Homocysteine S-methyltransferase DUF1295 PF06966.12 ORF2882 - 2e-13 50.4 0.4 2.6e-13 50.1 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF2882 - 4.8e-07 29.9 2.4 6.6e-07 29.4 2.4 1.3 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 ORF2882 - 0.00015 22.1 0.3 0.00015 22.1 0.3 1.9 2 0 0 2 2 2 1 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF2882 - 0.0082 14.9 0.5 0.0092 14.8 0.5 1.3 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family ICMT PF04140.14 ORF2882 - 0.055 13.9 0.1 0.055 13.9 0.1 2.0 2 1 0 2 2 2 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Piezo_RRas_bdg PF12166.8 ORF28037 - 2.5e-34 119.3 1.2 3e-34 119.1 1.2 1.1 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF1422 PF07226.11 ORF28037 - 0.035 14.1 2.6 2.1 8.4 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1422) Arf PF00025.21 ORF27971 - 2.2e-66 222.6 0.7 2.5e-66 222.4 0.7 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF27971 - 2.8e-13 50.1 0.1 3.9e-13 49.7 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF27971 - 4.8e-13 49.0 0.0 5.2e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF27971 - 1.6e-12 47.2 0.1 2e-12 46.9 0.1 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF27971 - 6.9e-09 35.4 0.2 8.8e-09 35.1 0.2 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF27971 - 6.2e-07 29.5 0.1 9.1e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF27971 - 4.3e-05 22.8 0.7 0.068 12.3 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit GTP_EFTU PF00009.27 ORF27971 - 0.0025 17.4 0.8 0.0041 16.7 0.3 1.5 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain NTPase_1 PF03266.15 ORF27971 - 0.044 13.7 0.1 0.057 13.3 0.1 1.3 1 0 0 1 1 1 0 NTPase 6PF2K PF01591.18 ORF27971 - 0.046 13.0 0.1 0.064 12.6 0.1 1.5 1 1 0 1 1 1 0 6-phosphofructo-2-kinase MobB PF03205.14 ORF27971 - 0.094 12.6 0.2 0.14 12.1 0.2 1.4 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B FeoB_N PF02421.18 ORF27971 - 0.16 11.5 0.8 2.5 7.6 0.1 2.1 1 1 1 2 2 2 0 Ferrous iron transport protein B DUF2207 PF09972.9 ORF27267 - 0.00036 19.4 0.0 0.00043 19.2 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) SOR_SNZ PF01680.17 ORF25780 - 2.1e-59 200.8 2.9 2.8e-59 200.4 2.9 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 ORF25780 - 0.0054 16.1 0.1 0.0065 15.8 0.1 1.1 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG PEP_mutase PF13714.6 ORF25780 - 0.1 12.0 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase Peptidase_S66C PF17676.1 ORF25780 - 0.15 12.6 0.0 0.21 12.1 0.0 1.3 1 0 0 1 1 1 0 LD-carboxypeptidase C-terminal domain PCI PF01399.27 ORF25228 - 6.3e-16 58.8 1.4 6.3e-16 58.8 1.4 1.6 2 0 0 2 2 2 1 PCI domain RPN5_C PF18098.1 ORF25228 - 3.3e-13 49.5 1.5 8.7e-13 48.1 1.5 1.8 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN5 C-terminal domain zf-CDGSH PF09360.10 ORF24255 - 0.00068 19.8 1.4 0.00089 19.4 0.1 1.8 2 0 0 2 2 2 1 Iron-binding zinc finger CDGSH type Binary_toxB PF03495.14 ORF24255 - 0.2 11.9 0.7 0.55 10.5 0.5 1.8 1 1 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain DUF3024 PF11225.8 ORF24255 - 0.23 11.7 2.2 0.26 11.6 0.4 2.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3024) CbiQ PF02361.16 ORF2349 - 0.063 12.9 0.2 0.1 12.2 0.2 1.3 1 0 0 1 1 1 0 Cobalt transport protein EF-hand_7 PF13499.6 ORF2333 - 6.1e-16 58.6 4.4 3e-07 30.8 0.2 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF2333 - 2.4e-15 54.8 7.7 6e-08 31.7 0.0 5.0 5 0 0 5 5 5 2 EF hand EF-hand_6 PF13405.6 ORF2333 - 3.4e-15 54.6 4.5 5.9e-08 32.0 0.0 4.4 4 1 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF2333 - 1.5e-07 31.2 6.5 0.0047 16.8 0.0 3.6 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF2333 - 9.5e-07 29.1 0.1 0.00057 20.1 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF2333 - 3.9e-05 22.9 6.8 0.00011 21.6 0.0 3.5 4 0 0 4 4 4 1 EF hand EF-hand_14 PF17959.1 ORF2333 - 6.5e-05 23.2 0.4 0.073 13.4 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain DUF3008 PF11450.8 ORF2333 - 0.1 12.8 0.3 0.2 11.9 0.3 1.4 1 0 0 1 1 1 0 Protein of unknwon function (DUF3008) KRAP_IP3R_bind PF14722.6 ORF2333 - 0.12 12.1 0.0 0.24 11.1 0.0 1.4 1 1 0 1 1 1 0 Ki-ras-induced actin-interacting protein-IP3R-interacting domain Acetyltransf_11 PF13720.6 ORF2333 - 0.14 12.7 0.0 0.85 10.1 0.0 2.1 2 0 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF1257 PF06868.11 ORF2333 - 0.16 12.3 0.0 0.26 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1257) FHA PF00498.26 ORF21559 - 4.4e-13 49.4 0.2 7.3e-13 48.7 0.2 1.4 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF21559 - 5e-07 30.0 0.0 7.1e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain XPA_N PF01286.18 ORF21559 - 0.016 15.2 0.2 0.035 14.2 0.2 1.6 1 0 0 1 1 1 0 XPA protein N-terminal RINGv PF12906.7 ORF21559 - 0.053 13.7 2.8 0.14 12.3 2.8 1.8 1 1 0 1 1 1 0 RING-variant domain Rota_NS35 PF02509.14 ORF21559 - 0.064 12.3 0.3 0.34 9.9 0.0 1.9 1 1 1 2 2 2 0 Rotavirus non-structural protein 35 VID27_PH PF17747.1 ORF21559 - 0.13 12.6 0.1 0.25 11.6 0.1 1.4 1 0 0 1 1 1 0 VID27 PH-like domain PRONE PF03759.13 ORF20220 - 0.0021 16.9 2.5 0.0028 16.5 2.5 1.2 1 0 0 1 1 1 1 PRONE (Plant-specific Rop nucleotide exchanger) HXXSHH PF07586.11 ORF20220 - 0.012 15.2 0.9 0.015 14.9 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1552) FAM150 PF15129.6 ORF20220 - 0.12 12.6 5.5 0.2 11.8 5.5 1.5 1 1 0 1 1 1 0 FAM150 family Metallophos PF00149.28 ORF19967 - 6.8e-06 26.7 0.4 8.6e-06 26.4 0.4 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF19967 - 0.0097 16.1 0.1 0.012 15.8 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain FAM35_C PF15793.5 ORF19967 - 0.083 12.3 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein family FAM35, C-terminal EF-hand_1 PF00036.32 ORF19012 - 5.8e-31 103.7 13.0 3.1e-07 29.5 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF19012 - 2.2e-25 86.3 8.8 2.1e-07 30.3 0.2 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF19012 - 2.1e-24 85.7 7.1 1.5e-13 50.9 0.4 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF19012 - 1.4e-22 78.1 10.1 9.8e-07 28.0 0.2 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF19012 - 2.4e-21 75.3 10.0 4.1e-11 42.5 0.1 4.3 3 1 1 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF19012 - 1.7e-10 41.2 3.0 0.00029 21.1 0.2 2.2 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF19012 - 5.5e-06 26.3 10.3 0.016 15.2 1.1 3.1 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_11 PF08976.11 ORF19012 - 6.9e-05 23.7 0.4 0.077 13.9 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain FAM184 PF15665.5 ORF19012 - 0.00087 19.1 0.6 0.0013 18.6 0.2 1.4 2 0 0 2 2 2 1 Family with sequence similarity 184, A and B Herpes_UL36 PF03586.13 ORF19012 - 0.001 18.5 0.2 0.26 10.5 0.1 2.2 1 1 0 2 2 2 2 Herpesvirus UL36 tegument protein Caleosin PF05042.13 ORF19012 - 0.0011 18.9 2.0 5.2 7.0 0.1 3.6 1 1 3 4 4 4 2 Caleosin related protein EF-hand_9 PF14658.6 ORF19012 - 0.0068 16.7 0.1 0.52 10.7 0.0 2.8 2 1 0 2 2 2 1 EF-hand domain Dockerin_1 PF00404.18 ORF19012 - 0.011 15.9 9.5 2.5 8.4 4.9 3.9 1 1 2 3 3 3 0 Dockerin type I domain VCBS PF13517.6 ORF19012 - 0.027 15.0 2.4 3.9 8.1 0.4 2.6 2 0 0 2 2 2 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella EF-hand_13 PF17958.1 ORF19012 - 0.09 12.6 0.1 17 5.3 0.0 2.7 2 1 1 3 3 3 0 EF-hand domain SdrD_B PF17210.3 ORF19012 - 3.3 8.0 7.6 2.2 8.6 1.9 2.7 1 1 0 2 2 2 0 SdrD B-like domain Orthopox_B11R PF07033.11 ORF19012 - 8 6.3 9.5 1.6 8.6 4.7 2.1 1 1 1 2 2 2 0 Orthopoxvirus B11R protein Peptidase_C3 PF00548.20 ORF18204 - 0.077 12.9 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) Peptidase_C3 PF00548.20 ORF150 - 0.017 15.1 0.3 0.023 14.6 0.3 1.2 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) T3SSipB PF16535.5 ORF1426 - 0.0014 19.1 1.9 0.002 18.6 1.9 1.2 1 1 0 1 1 1 1 Type III cell invasion protein SipB CK2S PF15011.6 ORF1426 - 0.002 18.0 9.9 0.0025 17.7 6.4 2.4 1 1 1 2 2 2 1 Casein Kinase 2 substrate DUF1664 PF07889.12 ORF1426 - 0.0034 17.4 4.2 0.13 12.3 0.4 2.3 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) RNA12 PF10443.9 ORF1426 - 0.0053 15.5 2.6 0.006 15.4 2.6 1.1 1 0 0 1 1 1 1 RNA12 protein Prominin PF05478.11 ORF1426 - 0.012 13.6 1.1 0.014 13.4 1.1 1.1 1 0 0 1 1 1 0 Prominin MCPsignal PF00015.21 ORF1426 - 0.012 15.4 4.6 0.82 9.5 0.5 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain GAS PF13851.6 ORF1426 - 0.038 13.3 7.7 0.064 12.6 7.1 1.7 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding BAR PF03114.18 ORF1426 - 0.081 12.6 4.9 0.1 12.2 4.9 1.2 1 0 0 1 1 1 0 BAR domain KxDL PF10241.9 ORF1426 - 0.13 12.6 4.9 4.5 7.6 0.7 2.8 1 1 2 3 3 3 0 Uncharacterized conserved protein HMMR_N PF15905.5 ORF1426 - 0.16 11.5 10.6 0.24 10.9 7.3 1.9 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF948 PF06103.11 ORF1426 - 0.22 11.8 1.5 4.7 7.6 0.3 2.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) ArAE_2_N PF10337.9 ORF1426 - 0.25 10.4 1.4 0.29 10.1 1.4 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal DUF5082 PF16888.5 ORF1426 - 0.34 11.2 8.2 0.12 12.6 4.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) AAA_32 PF13654.6 ORF1426 - 0.36 9.6 8.8 0.58 8.9 7.0 1.8 1 1 1 2 2 2 0 AAA domain Spc7 PF08317.11 ORF1426 - 0.38 9.6 12.5 0.97 8.3 12.4 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein Mt_ATP-synt_D PF05873.12 ORF1426 - 0.47 10.3 2.5 2.1 8.2 0.6 2.2 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) DUF883 PF05957.13 ORF1426 - 0.62 10.7 7.8 1.1 9.8 3.3 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Atg14 PF10186.9 ORF1426 - 0.83 8.7 8.9 1.1 8.3 8.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF641 PF04859.12 ORF1426 - 1.2 9.5 8.7 5.8 7.3 0.7 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Fib_alpha PF08702.10 ORF1426 - 1.9 8.7 5.8 26 5.0 2.0 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family PRKG1_interact PF15898.5 ORF1426 - 2.1 9.3 11.6 0.42 11.5 4.2 2.1 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Exonuc_VII_L PF02601.15 ORF1426 - 3.7 7.0 10.0 5.8 6.4 10.0 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF1843 PF08898.10 ORF1426 - 3.9 8.0 5.9 6.9 7.3 0.5 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF1843) V_ATPase_I PF01496.19 ORF1426 - 4.2 5.2 6.7 6.3 4.6 4.3 1.8 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family TMPIT PF07851.13 ORF1426 - 6.8 5.8 8.8 10 5.2 4.1 2.0 1 1 1 2 2 2 0 TMPIT-like protein TMF_DNA_bd PF12329.8 ORF1426 - 7 6.7 8.8 4.1 7.5 1.9 2.9 1 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding CorA PF01544.18 ORF1426 - 8.5 5.6 9.4 1.5 8.0 2.3 1.9 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein DUF2937 PF11157.8 ORF1426 - 8.9 6.0 7.1 3.7 7.2 3.9 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2937) CNOT1_TTP_bind PF16417.5 ORF13539 - 0.038 13.2 0.1 0.038 13.2 0.1 2.0 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Fibrillarin_2 PF10113.9 ORF13539 - 0.051 12.2 0.1 0.069 11.8 0.1 1.1 1 0 0 1 1 1 0 Fibrillarin-like archaeal protein Casc1_N PF15927.5 ORF13539 - 0.057 13.1 4.0 0.8 9.4 4.0 2.1 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus MTHFR_C PF12225.8 ORF12419 - 0.0043 16.7 1.4 0.0063 16.1 1.4 1.3 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal SPRY PF00622.28 ORF12061 - 0.033 14.3 0.0 0.05 13.7 0.0 1.3 1 0 0 1 1 1 0 SPRY domain PDEase_I PF00233.19 ORF11998 - 0.00014 21.7 0.2 0.00097 18.9 0.0 2.0 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase FKS1_dom1 PF14288.6 ORF11998 - 0.048 14.0 2.2 4.8 7.5 1.9 2.4 1 1 1 2 2 2 0 1,3-beta-glucan synthase subunit FKS1, domain-1 Asn_synthase PF00733.21 ORF11558 - 2.1e-17 63.8 0.2 4.8e-14 52.8 0.2 2.1 1 1 0 1 1 1 1 Asparagine synthase Acyl-CoA_dh_1 PF00441.24 ORF11558 - 0.16 12.2 1.9 3.2 8.0 0.2 2.4 2 1 0 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain Rnk_N PF14760.6 ORF110820 - 0.038 14.5 0.9 0.1 13.1 0.9 1.7 1 0 0 1 1 1 0 Rnk N-terminus SH3_9 PF14604.6 ORF110766 - 2.8e-06 27.1 0.1 6.9e-06 25.8 0.1 1.6 2 0 0 2 2 2 1 Variant SH3 domain SH3_1 PF00018.28 ORF110766 - 1.2e-05 24.8 0.1 2.2e-05 23.9 0.1 1.5 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 ORF110766 - 3e-05 23.6 0.0 5.4e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_6 PF12913.7 ORF110766 - 0.066 12.8 0.1 0.32 10.6 0.2 2.0 2 0 0 2 2 2 0 SH3 domain (SH3b1 type) Herpes_UL3 PF03369.13 ORF110716 - 0.021 15.4 5.9 0.27 11.8 1.4 2.2 1 1 1 2 2 2 0 Herpesvirus UL3 protein PDEase_I PF00233.19 ORF109819 - 5.7e-42 144.1 8.4 6.5e-42 143.9 8.4 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Rota_NS35 PF02509.14 ORF109669 - 0.0058 15.7 1.7 0.0062 15.6 1.3 1.4 1 1 0 1 1 1 1 Rotavirus non-structural protein 35 DUF4432 PF14486.6 ORF109669 - 0.068 12.0 0.1 0.085 11.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4432) DSX_dimer PF08828.10 ORF109559 - 0.037 13.7 0.0 0.074 12.7 0.0 1.5 1 0 0 1 1 1 0 Doublesex dimerisation domain DUF1846 PF08903.11 ORF108094 - 0.017 13.7 0.3 0.039 12.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1846) Rota_NS35 PF02509.14 ORF107021 - 0.0058 15.7 1.7 0.0062 15.6 1.3 1.4 1 1 0 1 1 1 1 Rotavirus non-structural protein 35 DUF4432 PF14486.6 ORF107021 - 0.068 12.0 0.1 0.085 11.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4432) PDZ PF00595.24 ORF104880 - 3.2e-07 30.6 0.5 0.008 16.5 0.1 2.6 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF104880 - 0.001 19.3 0.1 1.4 9.3 0.0 2.3 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF104880 - 0.0059 16.4 0.2 0.31 10.9 0.1 2.4 2 0 0 2 2 2 1 PDZ domain Peptidase_C3 PF00548.20 ORF104827 - 0.066 13.1 0.2 0.12 12.3 0.1 1.3 1 1 0 1 1 1 0 3C cysteine protease (picornain 3C) Ssl1 PF04056.14 ORF103970 - 2.5e-27 96.0 0.1 3.2e-27 95.6 0.1 1.1 1 0 0 1 1 1 1 Ssl1-like VWA_2 PF13519.6 ORF103970 - 1.3e-10 41.9 0.0 1.9e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain CitMHS PF03600.16 ORF103659 - 7.2e-09 35.3 0.7 2e-08 33.8 0.0 1.9 1 1 1 2 2 2 2 Citrate transporter Strabismus PF06638.11 ORF102536 - 1.3 7.5 4.6 1.5 7.4 4.6 1.1 1 0 0 1 1 1 0 Strabismus protein DRY_EERY PF09750.9 ORF102173 - 3.3e-05 24.2 0.7 0.00017 21.9 0.1 1.9 1 1 1 2 2 2 1 Alternative splicing regulator CDPS PF16715.5 ORF102173 - 0.011 15.4 1.1 0.026 14.2 0.1 1.8 2 0 0 2 2 2 0 Cyclodipeptide synthase LPP20 PF02169.16 ORF102173 - 0.039 14.3 0.8 2.4 8.5 0.1 2.1 2 0 0 2 2 2 0 LPP20 lipoprotein NUDE_C PF04880.13 ORF101771 - 0.0089 16.5 3.0 0.013 16.0 3.0 1.2 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region CitMHS PF03600.16 ORF101188 - 7.2e-09 35.3 0.7 2e-08 33.8 0.0 1.9 1 1 1 2 2 2 2 Citrate transporter DUF4618 PF15397.6 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.0022 17.5 7.1 0.0022 17.5 7.1 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4618) ADIP PF11559.8 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.034 14.2 19.0 0.42 10.7 0.7 2.8 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Tup_N PF08581.10 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.064 13.6 18.1 0.085 13.2 7.1 2.5 1 1 1 2 2 2 0 Tup N-terminal SieB PF14163.6 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.2 11.2 1.0 0.37 10.3 1.0 1.5 1 0 0 1 1 1 0 Super-infection exclusion protein B ZapB PF06005.12 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.24 11.9 19.5 2.7 8.5 6.0 3.6 1 1 2 3 3 3 0 Cell division protein ZapB KASH_CCD PF14662.6 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.24 11.2 16.2 0.58 10.0 0.8 2.1 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF4407 PF14362.6 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.3 10.4 12.9 0.65 9.3 12.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Macoilin PF09726.9 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.39 9.2 14.8 0.45 9.0 14.8 1.0 1 0 0 1 1 1 0 Macoilin family TMF_DNA_bd PF12329.8 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.41 10.7 17.1 0.3 11.1 6.8 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding FliT PF05400.13 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.48 11.3 8.1 0.84 10.5 5.0 2.7 1 1 1 2 2 2 0 Flagellar protein FliT Rx_N PF18052.1 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.51 10.6 5.4 14 6.0 3.0 2.3 2 1 0 2 2 2 0 Rx N-terminal domain DUF724 PF05266.14 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.59 9.9 14.7 0.33 10.7 7.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) CENP-H PF05837.12 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 1.2 9.5 12.9 8.7 6.8 8.2 2.3 1 1 1 2 2 2 0 Centromere protein H (CENP-H) UPF0242 PF06785.11 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 1.7 8.7 19.5 6.6 6.8 19.5 1.8 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 1.9 9.0 19.0 0.43 11.1 7.4 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF2570 PF10828.8 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 2.5 8.0 10.7 0.65 9.8 3.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) FAM76 PF16046.5 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 2.6 7.3 12.0 3.2 7.0 12.0 1.3 1 0 0 1 1 1 0 FAM76 protein DUF1664 PF07889.12 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 2.6 8.1 6.9 2 8.5 3.7 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Atg14 PF10186.9 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 2.9 6.9 17.1 3.8 6.5 16.6 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FliD_N PF02465.18 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 7.1 7.4 8.8 2.6 8.8 2.6 2.5 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Jnk-SapK_ap_N PF09744.9 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 8.3 6.6 18.1 46 4.2 18.1 1.9 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 TMPIT PF07851.13 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 9.5 5.4 13.0 3 7.0 7.7 2.1 1 1 1 2 2 2 0 TMPIT-like protein CoA_binding_3 PF13727.6 NODE_40017_length_520_cov_2.653608_g32566_i0reverse_frame_1 - 1.7 8.6 8.6 0.19 11.8 3.0 1.9 2 0 0 2 2 2 0 CoA-binding domain T4-Gluco-transf PF09198.10 NODE_39998_length_520_cov_70.352577_g32548_i0forward_frame_1 - 0.1 12.2 1.6 0.16 11.6 0.4 2.0 2 0 0 2 2 2 0 Bacteriophage T4 beta-glucosyltransferase Kinesin PF00225.23 NODE_39984_length_520_cov_119.898969_g32535_i0reverse_frame_1 - 8.5e-06 24.9 0.0 1.2e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Kinesin motor domain T3SS_needle_E PF08988.10 NODE_39984_length_520_cov_119.898969_g32535_i0reverse_frame_1 - 0.042 14.0 0.4 0.097 12.8 0.4 1.6 1 0 0 1 1 1 0 Type III secretion system, cytoplasmic E component of needle DUF1350 PF07082.11 NODE_39973_length_520_cov_336.725773_g32524_i0forward_frame_1 - 0.054 12.8 0.1 0.098 11.9 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1350) DUF5463 PF17551.2 NODE_39973_length_520_cov_336.725773_g32524_i0forward_frame_1 - 2.1 8.3 6.9 1 9.3 0.5 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5463) DUF3450 PF11932.8 NODE_39962_length_521_cov_2.588477_g32517_i0reverse_frame_1 - 0.001 18.4 4.6 0.0015 17.9 4.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) DUF3573 PF12097.8 NODE_39962_length_521_cov_2.588477_g32517_i0reverse_frame_1 - 0.22 10.3 3.9 0.27 10.0 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DivIC PF04977.15 NODE_39962_length_521_cov_2.588477_g32517_i0reverse_frame_1 - 2.4 8.0 8.5 26 4.7 7.7 2.4 1 1 0 1 1 1 0 Septum formation initiator Hum_adeno_E3A PF05393.11 NODE_39957_length_521_cov_3.411523_g32512_i0forward_frame_1 - 0.13 12.3 0.1 0.48 10.4 0.0 1.9 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein XkdW PF09636.10 NODE_39954_length_521_cov_5.621399_g32509_i0forward_frame_1 - 0.042 13.9 0.1 0.077 13.1 0.1 1.4 1 0 0 1 1 1 0 XkdW protein YhdB PF14148.6 NODE_39950_length_521_cov_65.273663_g32506_i0forward_frame_1 - 0.0051 16.9 0.7 0.016 15.3 0.2 2.0 2 0 0 2 2 2 1 YhdB-like protein ubiquitin PF00240.23 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 3.4e-14 52.4 0.0 5.6e-14 51.6 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family zf-A20 PF01754.16 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 3.6e-09 36.4 10.4 3.6e-09 36.4 10.4 1.6 2 0 0 2 2 2 1 A20-like zinc finger Rad60-SLD PF11976.8 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 0.0028 17.4 0.0 0.0059 16.4 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 0.0035 17.9 0.2 0.0065 17.0 0.2 1.5 1 1 0 1 1 1 1 DUF2407 ubiquitin-like domain Ubiquitin_2 PF14560.6 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 0.0098 16.3 0.0 0.024 15.1 0.0 1.6 2 0 0 2 2 2 1 Ubiquitin-like domain DUF3811 PF11656.8 NODE_39903_length_522_cov_2.722793_g32466_i0reverse_frame_1 - 0.033 14.6 0.5 0.065 13.6 0.5 1.4 1 0 0 1 1 1 0 YjbD family (DUF3811) Dynamitin PF04912.14 NODE_39903_length_522_cov_2.722793_g32466_i0reverse_frame_1 - 0.033 13.5 5.1 0.041 13.2 5.1 1.1 1 0 0 1 1 1 0 Dynamitin SPT_ssu-like PF11779.8 NODE_39889_length_522_cov_86.677618_g32453_i0reverse_frame_1 - 0.041 13.5 2.1 0.045 13.4 1.1 1.6 2 0 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like Cys_rich_VLP PF14194.6 NODE_39882_length_522_cov_97.207392_g32447_i0forward_frame_1 - 0.58 10.3 2.8 4.2 7.6 0.8 2.4 2 0 0 2 2 2 0 Cysteine-rich VLP Neuropep_like PF15161.6 NODE_39871_length_522_cov_138.728953_g32436_i0forward_frame_1 - 0.059 13.0 0.0 0.16 11.6 0.0 1.7 1 0 0 1 1 1 0 Neuropeptide-like ERGIC_N PF13850.6 NODE_39870_length_522_cov_148.141684_g32435_i0reverse_frame_1 - 0.029 14.7 0.3 0.057 13.8 0.1 1.6 2 1 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) AI-2E_transport PF01594.16 NODE_39870_length_522_cov_148.141684_g32435_i0reverse_frame_1 - 0.098 11.8 0.2 0.12 11.5 0.2 1.1 1 0 0 1 1 1 0 AI-2E family transporter RCC1_2 PF13540.6 NODE_39864_length_522_cov_329.180698_g32429_i0reverse_frame_1 - 0.00023 20.9 4.0 1.2 9.0 0.0 3.4 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_39864_length_522_cov_329.180698_g32429_i0reverse_frame_1 - 0.023 14.8 0.9 41 4.2 0.0 3.1 2 1 1 3 3 3 0 Uncharacterised ACR, YagE family COG1723 TRAM_LAG1_CLN8 PF03798.16 NODE_39864_length_522_cov_329.180698_g32429_i0forward_frame_1 - 1.6 8.4 6.2 2.3 7.9 6.2 1.2 1 0 0 1 1 1 0 TLC domain HTH_3 PF01381.22 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 7.1e-17 61.2 0.0 1.1e-16 60.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 1.8e-10 41.0 0.5 2.9e-10 40.3 0.5 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 2.1e-06 27.5 0.0 4e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 2.1e-06 27.6 0.0 3e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 2.7e-05 24.5 0.0 4.2e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 0.00084 19.2 0.0 0.0013 18.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 0.0014 18.3 0.0 0.0024 17.5 0.0 1.4 1 0 0 1 1 1 1 Cupin domain HTH_11 PF08279.12 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 0.048 13.6 0.1 0.081 12.9 0.1 1.3 1 0 0 1 1 1 0 HTH domain HTH_IclR PF09339.10 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 0.062 13.1 0.0 0.13 12.1 0.0 1.5 1 1 0 1 1 1 0 IclR helix-turn-helix domain HTH_23 PF13384.6 NODE_39854_length_523_cov_1.694672_g32422_i0forward_frame_3 - 0.12 12.2 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain Na_H_Exchanger PF00999.21 NODE_39853_length_523_cov_1.956967_g32421_i0reverse_frame_3 - 2.8e-12 46.2 13.8 3.7e-12 45.7 13.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family FixQ PF05545.11 NODE_39853_length_523_cov_1.956967_g32421_i0reverse_frame_3 - 0.052 13.5 1.0 0.052 13.5 1.0 2.4 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ Tetraspanin PF00335.20 NODE_39853_length_523_cov_1.956967_g32421_i0reverse_frame_3 - 0.65 9.7 6.8 3.6 7.2 0.1 2.1 2 0 0 2 2 2 0 Tetraspanin family ThrE PF06738.12 NODE_39853_length_523_cov_1.956967_g32421_i0reverse_frame_3 - 8.2 5.7 11.6 0.12 11.7 1.6 2.0 1 1 1 2 2 2 0 Putative threonine/serine exporter Pkinase PF00069.25 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 5e-43 147.4 0.1 5.9e-43 147.1 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 2.4e-23 82.7 0.0 3.1e-23 82.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 1.3e-06 27.4 0.0 1.7e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 7.5e-05 21.9 0.0 0.00011 21.4 0.0 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 Kinase-like PF14531.6 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 0.00062 19.2 0.0 0.00074 18.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 0.015 15.2 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Haspin_kinase PF12330.8 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 0.026 13.5 0.0 0.034 13.1 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 0.044 13.4 0.0 0.065 12.9 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 YukC PF10140.9 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 0.11 11.2 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC RIO1 PF01163.22 NODE_39852_length_523_cov_2.061475_g32420_i0reverse_frame_2 - 0.13 11.9 0.0 0.19 11.3 0.0 1.4 1 1 0 1 1 1 0 RIO1 family DUF4239 PF14023.6 NODE_39849_length_523_cov_2.625000_g20520_i1reverse_frame_3 - 0.04 13.6 0.6 0.054 13.2 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4239) VP9 PF09625.10 NODE_39849_length_523_cov_2.625000_g20520_i1reverse_frame_2 - 0.031 14.4 0.1 0.071 13.3 0.1 1.6 1 0 0 1 1 1 0 VP9 protein Imm2 PF14426.6 NODE_39844_length_523_cov_3.452869_g32413_i0forward_frame_2 - 0.019 15.0 0.0 0.042 13.9 0.0 1.5 1 0 0 1 1 1 0 Immunity protein Imm2 FAD_binding_4 PF01565.23 NODE_39842_length_523_cov_4.766393_g32411_i0reverse_frame_3 - 2.5e-21 75.9 0.0 3.2e-21 75.5 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Imm51 PF15595.6 NODE_39842_length_523_cov_4.766393_g32411_i0reverse_frame_3 - 0.11 12.5 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Immunity protein 51 DUF2024 PF09630.10 NODE_39842_length_523_cov_4.766393_g32411_i0forward_frame_3 - 0.096 12.6 0.0 0.24 11.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) zf-P11 PF03854.14 NODE_39842_length_523_cov_4.766393_g32411_i0forward_frame_2 - 0.28 10.9 2.4 0.61 9.8 2.4 1.5 1 0 0 1 1 1 0 P-11 zinc finger TetR_C_24 PF17932.1 NODE_39839_length_523_cov_20.469262_g32408_i0reverse_frame_2 - 0.045 14.0 0.0 0.064 13.5 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF1297 PF06973.12 NODE_39836_length_523_cov_69.965164_g32405_i0forward_frame_2 - 0.26 10.8 0.0 0.35 10.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1297) DUF4709 PF15821.5 NODE_39825_length_523_cov_100.848361_g32394_i0reverse_frame_2 - 0.064 13.5 0.5 0.13 12.5 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4709) zf-B_box PF00643.24 NODE_39803_length_523_cov_310.848361_g32374_i0reverse_frame_3 - 0.0045 17.1 8.5 0.0045 17.1 8.5 2.3 3 0 0 3 3 3 1 B-box zinc finger PHD_2 PF13831.6 NODE_39803_length_523_cov_310.848361_g32374_i0reverse_frame_3 - 0.0081 15.7 1.9 0.025 14.1 1.9 1.8 1 0 0 1 1 1 1 PHD-finger PHD PF00628.29 NODE_39803_length_523_cov_310.848361_g32374_i0reverse_frame_3 - 0.0081 16.0 5.2 0.0081 16.0 5.2 1.9 2 1 0 2 2 2 1 PHD-finger E1_UFD PF09358.10 NODE_39803_length_523_cov_310.848361_g32374_i0reverse_frame_3 - 0.034 14.8 0.2 0.062 14.0 0.2 1.4 1 0 0 1 1 1 0 Ubiquitin fold domain E1_UFD PF09358.10 NODE_39802_length_523_cov_310.950820_g32373_i0reverse_frame_3 - 0.0024 18.6 0.2 0.0046 17.6 0.2 1.5 1 0 0 1 1 1 1 Ubiquitin fold domain PHD PF00628.29 NODE_39802_length_523_cov_310.950820_g32373_i0reverse_frame_3 - 0.023 14.6 6.5 0.023 14.6 6.5 2.0 2 1 0 2 2 2 0 PHD-finger zf-B_box PF00643.24 NODE_39802_length_523_cov_310.950820_g32373_i0reverse_frame_3 - 0.025 14.7 11.4 0.025 14.7 11.4 2.4 3 0 0 3 3 3 0 B-box zinc finger PHD_2 PF13831.6 NODE_39802_length_523_cov_310.950820_g32373_i0reverse_frame_3 - 1.5 8.5 9.4 0.066 12.8 2.9 2.1 2 0 0 2 2 2 0 PHD-finger TrpP PF17099.5 NODE_39793_length_524_cov_1.601227_g32365_i0reverse_frame_2 - 0.02 14.7 0.9 0.025 14.3 0.9 1.1 1 0 0 1 1 1 0 Tryptophan transporter TrpP DUF2164 PF09932.9 NODE_39793_length_524_cov_1.601227_g32365_i0forward_frame_3 - 0.13 12.4 0.1 0.23 11.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) TB PF00683.17 NODE_39792_length_524_cov_1.885481_g32364_i0reverse_frame_2 - 0.017 14.9 1.3 0.034 13.9 1.3 1.5 1 0 0 1 1 1 0 TB domain TrwC PF08751.11 NODE_39790_length_524_cov_2.386503_g32362_i0forward_frame_3 - 0.16 11.4 4.6 0.2 11.1 4.6 1.1 1 0 0 1 1 1 0 TrwC relaxase DUF2214 PF09980.9 NODE_39788_length_524_cov_2.578732_g32360_i0reverse_frame_2 - 0.0034 17.2 0.2 0.0051 16.6 0.2 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2214) NusB PF01029.18 NODE_39785_length_524_cov_2.775051_g32357_i0reverse_frame_3 - 0.13 12.5 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 NusB family Myb_DNA-bind_6 PF13921.6 NODE_39785_length_524_cov_2.775051_g32357_i0reverse_frame_2 - 0.093 13.0 0.5 0.37 11.1 0.1 2.2 2 0 0 2 2 2 0 Myb-like DNA-binding domain Mucin PF01456.17 NODE_39781_length_524_cov_2.928425_g32353_i0reverse_frame_2 - 0.0012 18.8 19.2 0.0012 18.8 19.2 1.5 2 0 0 2 2 2 1 Mucin-like glycoprotein DUF4834 PF16118.5 NODE_39781_length_524_cov_2.928425_g32353_i0reverse_frame_2 - 0.065 14.2 0.0 0.099 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) vMSA PF00695.19 NODE_39781_length_524_cov_2.928425_g32353_i0reverse_frame_2 - 0.19 10.8 3.2 0.25 10.4 3.2 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus LAT PF15234.6 NODE_39781_length_524_cov_2.928425_g32353_i0reverse_frame_2 - 1.3 8.7 4.5 1.7 8.3 4.5 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells FSA_C PF10479.9 NODE_39781_length_524_cov_2.928425_g32353_i0reverse_frame_2 - 3.2 5.8 10.4 4 5.5 10.4 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF3742 PF12553.8 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_3 - 3 8.0 6.8 4.9 7.3 6.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) RAP1 PF07218.11 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_3 - 6.4 4.9 6.7 7.2 4.8 6.7 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF4834 PF16118.5 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_2 - 0.025 15.6 1.2 0.32 12.0 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Tmemb_9 PF05434.11 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_2 - 0.57 10.1 8.5 3.9 7.4 3.6 2.3 2 0 0 2 2 2 0 TMEM9 DUF2371 PF10177.9 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_2 - 0.72 10.0 4.5 1.2 9.3 3.0 1.9 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2371) UL45 PF05473.12 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_2 - 1.2 8.7 13.4 10 5.7 10.5 2.4 2 1 0 2 2 2 0 UL45 protein, carbohydrate-binding C-type lectin-like HemY_N PF07219.13 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_2 - 3.9 7.7 14.8 11 6.2 0.1 2.9 2 1 0 2 2 2 0 HemY protein N-terminus LRR19-TM PF15176.6 NODE_39781_length_524_cov_2.928425_g32353_i0forward_frame_2 - 7.3 6.7 15.9 0.91 9.6 0.7 2.6 2 1 0 2 2 2 0 Leucine-rich repeat family 19 TM domain DUF3342 PF11822.8 NODE_39779_length_524_cov_3.022495_g32351_i0forward_frame_3 - 3.2e-05 24.0 0.0 6.4e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) Self-incomp_S1 PF05938.11 NODE_39779_length_524_cov_3.022495_g32351_i0forward_frame_2 - 0.018 15.5 3.2 0.019 15.5 2.3 1.5 1 1 0 1 1 1 0 Plant self-incompatibility protein S1 RNA_GG_bind PF10258.9 NODE_39778_length_524_cov_3.065440_g32350_i0forward_frame_2 - 1.3e-08 34.8 0.1 2e-08 34.1 0.1 1.3 1 0 0 1 1 1 1 PHAX RNA-binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks121.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks121.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks121.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks121.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GSG-1 PF07803.11 NODE_39776_length_524_cov_4.098160_g32348_i0reverse_frame_2 - 1.5 8.8 10.7 0.15 12.0 4.1 2.3 1 1 1 2 2 2 0 GSG1-like protein Myb_DNA-bind_7 PF15963.5 NODE_39776_length_524_cov_4.098160_g32348_i0forward_frame_3 - 0.069 13.1 0.3 0.13 12.2 0.3 1.5 1 1 0 1 1 1 0 Myb DNA-binding like ER-remodelling PF14755.6 NODE_39776_length_524_cov_4.098160_g32348_i0forward_frame_2 - 0.067 13.5 0.0 0.099 12.9 0.0 1.2 1 0 0 1 1 1 0 Intracellular membrane remodeller zf-C3HC4 PF00097.25 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 0.012 15.5 0.1 0.026 14.4 0.1 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF2895 PF11444.8 NODE_39774_length_524_cov_12.288344_g32346_i0reverse_frame_3 - 0.004 16.6 0.2 0.005 16.2 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2895) DUF1616 PF07760.11 NODE_39774_length_524_cov_12.288344_g32346_i0reverse_frame_2 - 0.19 11.1 0.9 0.29 10.5 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) DUF1132 PF06575.12 NODE_39768_length_524_cov_73.858896_g32340_i0reverse_frame_3 - 0.0075 16.6 0.2 0.014 15.8 0.2 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1132) HycH PF07450.11 NODE_39766_length_524_cov_79.016360_g32338_i0reverse_frame_3 - 0.025 14.9 0.0 0.035 14.5 0.0 1.2 1 0 0 1 1 1 0 Formate hydrogenlyase maturation protein HycH PTH2 PF01981.16 NODE_39761_length_524_cov_88.603272_g32334_i0forward_frame_3 - 0.2 11.9 1.1 0.31 11.4 0.4 1.6 2 0 0 2 2 2 0 Peptidyl-tRNA hydrolase PTH2 PI3K_C2 PF00792.24 NODE_39756_length_524_cov_101.408998_g32329_i0forward_frame_3 - 0.015 15.2 0.0 0.042 13.8 0.0 1.6 1 1 1 2 2 2 0 Phosphoinositide 3-kinase C2 DMRL_synthase PF00885.19 NODE_39755_length_524_cov_103.032720_g32328_i0forward_frame_2 - 0.073 12.9 0.0 0.099 12.5 0.0 1.2 1 0 0 1 1 1 0 6,7-dimethyl-8-ribityllumazine synthase Phostensin PF13914.6 NODE_39755_length_524_cov_103.032720_g32328_i0forward_frame_2 - 0.13 12.9 0.0 0.16 12.6 0.0 1.2 1 0 0 1 1 1 0 Phostensin PP1-binding and SH3-binding region TMEM119 PF15724.5 NODE_39745_length_524_cov_154.586912_g32318_i0reverse_frame_2 - 8.5 6.4 14.1 12 5.9 14.1 1.2 1 0 0 1 1 1 0 TMEM119 family Lum_binding PF00677.17 NODE_39726_length_525_cov_1.928571_g32302_i0forward_frame_3 - 7.3e-13 48.3 0.1 1e-12 47.8 0.1 1.2 1 0 0 1 1 1 1 Lumazine binding domain LysR_substrate PF03466.20 NODE_39724_length_525_cov_2.910204_g32300_i0forward_frame_2 - 1.3e-09 37.7 0.3 2e-09 37.1 0.0 1.4 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 NODE_39724_length_525_cov_2.910204_g32300_i0forward_frame_2 - 7.3e-07 29.1 0.0 1.2e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF4215 PF13948.6 NODE_39723_length_525_cov_3.204082_g24812_i1reverse_frame_3 - 0.031 14.7 8.5 0.031 14.7 8.5 4.1 3 1 1 4 4 4 0 Domain of unknown function (DUF4215) Trp_Tyr_perm PF03222.13 NODE_39720_length_525_cov_3.463265_g32297_i0reverse_frame_3 - 2.1e-31 109.4 4.7 2.1e-31 109.4 4.7 1.7 2 0 0 2 2 2 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 NODE_39720_length_525_cov_3.463265_g32297_i0reverse_frame_3 - 0.00055 18.8 4.0 0.0007 18.4 4.0 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein FixO PF02433.15 NODE_39708_length_525_cov_88.536735_g32285_i0reverse_frame_3 - 0.033 13.6 1.8 0.039 13.4 1.8 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO VPS11_C PF12451.8 NODE_39708_length_525_cov_88.536735_g32285_i0reverse_frame_3 - 0.074 13.3 0.7 0.24 11.7 0.7 1.9 1 0 0 1 1 1 0 Vacuolar protein sorting protein 11 C terminal DUF1664 PF07889.12 NODE_39708_length_525_cov_88.536735_g32285_i0reverse_frame_3 - 1.4 8.9 8.3 0.53 10.3 3.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) ALIX_LYPXL_bnd PF13949.6 NODE_39707_length_525_cov_92.322449_g32284_i0reverse_frame_3 - 7.4e-05 22.2 0.6 7.7e-05 22.1 0.1 1.4 2 0 0 2 2 2 1 ALIX V-shaped domain binding to HIV MORN PF02493.20 NODE_39705_length_525_cov_101.436735_g32282_i0reverse_frame_3 - 8e-15 53.8 31.6 0.00063 19.5 0.4 6.0 6 0 0 6 6 6 5 MORN repeat DUF3048_C PF17479.2 NODE_39705_length_525_cov_101.436735_g32282_i0reverse_frame_3 - 0.013 15.9 7.5 1.5 9.3 1.8 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Thioredoxin_11 PF18078.1 NODE_39705_length_525_cov_101.436735_g32282_i0reverse_frame_3 - 3.3 7.8 5.8 1.7 8.7 0.6 2.4 2 1 1 3 3 3 0 Thioredoxin-like SNTX domain T2SSM PF04612.12 NODE_39696_length_525_cov_193.381633_g32273_i0forward_frame_2 - 0.055 13.5 0.2 0.073 13.1 0.2 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M MPS-4 PF17523.2 NODE_39686_length_525_cov_446.232653_g32265_i0reverse_frame_3 - 0.019 15.1 5.0 1.7 8.8 0.4 2.3 2 0 0 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Asp PF00026.23 ORF99567 - 1.8e-16 60.4 1.2 2.3e-16 60.1 1.2 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF99567 - 4.6e-09 36.8 0.2 6.1e-09 36.4 0.2 1.2 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal PP2C PF00481.21 ORF98028 - 4.2e-17 62.6 0.3 5e-17 62.4 0.3 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF98028 - 6.6e-07 29.2 0.8 7.9e-07 28.9 0.8 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PAE PF03283.13 ORF98028 - 0.08 12.1 0.1 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 Pectinacetylesterase SpoIIE PF07228.12 ORF98028 - 0.1 12.5 0.4 0.2 11.6 0.4 1.5 1 1 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) zf-LITAF-like PF10601.9 ORF94606 - 2.2e-09 37.4 10.4 3.2e-09 36.9 10.4 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain EF-hand_7 PF13499.6 ORF94336 - 4.6e-10 39.8 0.7 1.2e-09 38.4 0.2 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF94336 - 1.8e-09 36.7 0.2 4.9e-05 22.9 0.5 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF94336 - 3.1e-08 32.6 0.3 2.8e-05 23.3 0.3 2.9 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF94336 - 2.5e-07 29.9 0.5 1.5e-05 24.2 0.3 2.9 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF94336 - 5e-07 29.5 0.1 1.7e-06 27.8 0.1 1.9 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_11 PF08976.11 ORF94336 - 9.3e-05 23.3 0.1 0.00023 22.0 0.0 1.6 2 0 0 2 2 2 1 EF-hand domain Nucleocapsid-N PF11030.8 ORF91881 - 0.064 13.2 0.2 0.095 12.6 0.2 1.2 1 0 0 1 1 1 0 Nucleocapsid protein N DUF3325 PF11804.8 ORF90885 - 0.16 12.1 1.4 5.1 7.3 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3325) DRY_EERY PF09750.9 ORF9007 - 0.088 13.1 0.5 0.14 12.5 0.5 1.3 1 0 0 1 1 1 0 Alternative splicing regulator PGA2 PF07543.12 ORF89889 - 0.0029 17.6 0.2 0.0047 16.9 0.2 1.3 1 0 0 1 1 1 1 Protein trafficking PGA2 Phage_holin_3_6 PF07332.11 ORF89889 - 0.015 15.3 1.5 1.9 8.5 0.0 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4131 PF13567.6 ORF89889 - 0.039 13.6 0.1 0.039 13.6 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) EZH2_N PF18601.1 ORF89251 - 0.93 9.9 5.8 1.1 9.7 0.5 3.0 1 1 2 3 3 3 0 EZH2 N-terminal domain Sigma70_r2 PF04542.14 ORF87691 - 0.12 12.2 0.0 0.65 9.8 0.0 1.9 2 0 0 2 2 2 0 Sigma-70 region 2 DUF5549 PF17703.1 ORF8666 - 0.00031 20.5 0.2 0.0004 20.1 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5549) IncF PF17626.2 ORF8666 - 0.092 13.1 4.9 0.06 13.7 3.3 1.5 1 1 0 1 1 1 0 Inclusion membrane protein F PP2C PF00481.21 ORF86454 - 4.2e-17 62.6 0.3 5e-17 62.4 0.3 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF86454 - 6.6e-07 29.2 0.8 7.9e-07 28.9 0.8 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PAE PF03283.13 ORF86454 - 0.08 12.1 0.1 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 Pectinacetylesterase SpoIIE PF07228.12 ORF86454 - 0.1 12.5 0.4 0.2 11.6 0.4 1.5 1 1 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) DUF547 PF04784.14 ORF86231 - 6.1e-07 29.5 0.0 8.6e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF547 PdaC PF13739.6 ORF86231 - 0.25 12.4 2.9 0.094 13.7 0.6 1.6 2 0 0 2 2 2 0 Deacetylase PdaC OEP PF02321.18 ORF86207 - 1.1e-26 93.8 12.2 1.2e-26 93.7 12.2 1.0 1 0 0 1 1 1 1 Outer membrane efflux protein Glyco_transf_8 PF01501.20 ORF85569 - 0.007 15.9 0.3 0.007 15.9 0.3 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 8 Tegument_dsDNA PF12818.7 ORF85569 - 0.27 10.3 0.0 0.34 10.0 0.0 1.1 1 0 0 1 1 1 0 dsDNA viral tegument protein ADPrib_exo_Tox PF03496.14 ORF85061 - 0.23 10.8 0.0 0.31 10.4 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosyltransferase exoenzyme DNA_pol_B_palm PF14792.6 ORF84274 - 1.8e-27 95.8 0.0 2.2e-27 95.5 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase beta palm DNA_pol_B_thumb PF14791.6 ORF84274 - 7.6e-17 61.2 0.0 1.4e-16 60.4 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase beta thumb NTP_transf_2 PF01909.23 ORF84274 - 0.0094 16.2 0.1 0.02 15.2 0.0 1.6 2 0 0 2 2 2 1 Nucleotidyltransferase domain HNH_3 PF13392.6 ORF83970 - 1.2e-11 44.2 0.1 2.2e-11 43.3 0.1 1.5 1 0 0 1 1 1 1 HNH endonuclease HTH_Tnp_ISL3 PF13542.6 ORF83970 - 0.032 13.6 0.0 0.074 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 NMT_C PF02799.15 ORF83776 - 1.6e-60 204.3 3.8 1.8e-60 204.0 3.8 1.0 1 0 0 1 1 1 1 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain DUF1995 PF09353.10 ORF83776 - 0.15 12.1 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1995) Dynein_IC2 PF11540.8 ORF83776 - 0.16 11.9 0.1 0.49 10.4 0.0 1.8 2 0 0 2 2 2 0 Cytoplasmic dynein 1 intermediate chain 2 Abhydrolase_6 PF12697.7 ORF82892 - 4.8e-05 24.1 0.0 5.4e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family fn3_6 PF17766.1 ORF82540 - 0.068 13.4 0.1 0.14 12.4 0.0 1.5 2 0 0 2 2 2 0 Fibronectin type-III domain USP19_linker PF16602.5 ORF82540 - 0.79 10.3 2.9 0.82 10.2 0.6 2.0 2 0 0 2 2 2 0 Linker region of USP19 deubiquitinase Got1 PF04178.12 ORF81823 - 1.7e-26 92.8 10.8 1.7e-26 92.8 10.8 1.8 1 1 1 2 2 2 2 Got1/Sft2-like family DuoxA PF10204.9 ORF81823 - 1.8 7.5 8.4 0.42 9.6 0.5 2.2 2 0 0 2 2 2 0 Dual oxidase maturation factor P2 PF07194.11 ORF81151 - 0.03 14.4 0.1 0.065 13.3 0.1 1.5 1 0 0 1 1 1 0 P2 response regulator binding domain NifW PF03206.14 ORF81151 - 1.1 9.8 6.3 8.9 6.9 0.1 2.5 1 1 1 2 2 2 0 Nitrogen fixation protein NifW E1-N PF14463.6 ORF78252 - 0.12 12.2 0.4 0.61 9.9 0.1 1.9 1 1 1 2 2 2 0 E1 N-terminal domain DUF3069 PF11269.8 ORF77826 - 0.03 14.6 1.5 0.14 12.4 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3069) Muted PF14942.6 ORF77826 - 0.48 10.8 9.7 6.8 7.0 5.2 2.4 2 1 0 2 2 2 0 Organelle biogenesis, Muted-like protein bPH_1 PF08000.11 ORF76070 - 0.018 15.1 0.1 0.067 13.3 0.0 1.8 1 1 1 2 2 2 0 Bacterial PH domain PulA_N1 PF17999.1 ORF76070 - 0.1 13.4 0.3 0.26 12.1 0.1 1.7 1 1 1 2 2 2 0 Pullulanase N1-terminal domain DUF5549 PF17703.1 ORF74251 - 0.00031 20.5 0.2 0.0004 20.1 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5549) IncF PF17626.2 ORF74251 - 0.092 13.1 4.9 0.06 13.7 3.3 1.5 1 1 0 1 1 1 0 Inclusion membrane protein F DUF4849 PF16141.5 ORF73445 - 0.038 13.3 0.0 0.058 12.6 0.0 1.2 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 DUF3169 PF11368.8 ORF73445 - 0.62 9.5 12.3 0.12 11.9 4.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) DUF1056 PF06341.11 ORF73445 - 0.97 9.8 6.8 6.1 7.2 0.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1056) MatE PF01554.18 ORF7322 - 5.5e-28 97.6 5.6 5.5e-28 97.6 5.6 2.0 2 0 0 2 2 2 1 MatE DUF5518 PF17647.1 ORF7322 - 2.1 8.5 13.3 0.23 11.6 2.2 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5518) CDKN3 PF05706.12 ORF72623 - 0.064 12.9 0.0 0.089 12.5 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Exo_endo_phos PF03372.23 ORF70518 - 0.0043 16.6 0.0 0.0082 15.7 0.0 1.3 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Receptor_IA-2 PF11548.8 ORF70518 - 0.16 11.9 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase receptor IA-2 DHHC PF01529.20 ORF69187 - 0.0014 18.8 8.8 0.002 18.2 8.8 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase Baculo_11_kDa PF06143.11 ORF69187 - 0.0034 16.9 2.1 0.17 11.5 0.0 2.6 2 0 0 2 2 2 2 Baculovirus 11 kDa family DUF5643 PF18705.1 ORF68621 - 0.042 13.8 0.2 0.063 13.3 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5643) Ribosomal_S17 PF00366.20 ORF68481 - 2.6e-18 65.9 0.8 2.6e-18 65.9 0.8 1.4 2 0 0 2 2 2 1 Ribosomal protein S17 NDUFA12 PF05071.16 ORF6839 - 1.9e-15 57.5 9.0 4e-15 56.4 9.0 1.6 1 1 0 1 1 1 1 NADH ubiquinone oxidoreductase subunit NDUFA12 PAP2_C PF14360.6 ORF67633 - 8.6 7.0 12.3 0.15 12.6 4.1 2.2 3 0 0 3 3 3 0 PAP2 superfamily C-terminal Metallophos PF00149.28 ORF67355 - 0.0003 21.4 0.1 0.00039 21.0 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 ORF67355 - 0.0024 17.2 0.0 0.003 16.9 0.0 1.1 1 0 0 1 1 1 1 Metallophosphoesterase, calcineurin superfamily PP2C PF00481.21 ORF66798 - 4.2e-17 62.6 0.3 5e-17 62.4 0.3 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF66798 - 6.6e-07 29.2 0.8 7.9e-07 28.9 0.8 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PAE PF03283.13 ORF66798 - 0.08 12.1 0.1 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 Pectinacetylesterase SpoIIE PF07228.12 ORF66798 - 0.1 12.5 0.4 0.2 11.6 0.4 1.5 1 1 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) PP2C PF00481.21 ORF6518 - 4.2e-17 62.6 0.3 5e-17 62.4 0.3 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF6518 - 6.6e-07 29.2 0.8 7.9e-07 28.9 0.8 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PAE PF03283.13 ORF6518 - 0.08 12.1 0.1 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 Pectinacetylesterase SpoIIE PF07228.12 ORF6518 - 0.1 12.5 0.4 0.2 11.6 0.4 1.5 1 1 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) Ldh_2 PF02615.14 ORF61883 - 3.2e-59 200.7 4.1 3.5e-59 200.6 4.1 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase Lactamase_B_2 PF12706.7 ORF61756 - 1.9e-10 40.6 0.0 2.7e-10 40.1 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain LcrR PF09621.10 ORF61756 - 0.21 11.1 0.0 0.62 9.5 0.0 1.7 2 0 0 2 2 2 0 Type III secretion system regulator (LcrR) TRAM_LAG1_CLN8 PF03798.16 ORF6130 - 6.3e-15 55.4 1.5 7.5e-15 55.2 1.5 1.1 1 0 0 1 1 1 1 TLC domain WES_acyltransf PF03007.16 ORF61169 - 7.6e-13 48.8 0.0 9.4e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF61169 - 0.0071 14.9 0.0 0.0085 14.7 0.0 1.1 1 0 0 1 1 1 1 Alcohol acetyltransferase Condensation PF00668.20 ORF61169 - 0.048 12.3 0.0 0.061 12.0 0.0 1.1 1 0 0 1 1 1 0 Condensation domain HNHc_6 PF16784.5 ORF61169 - 0.051 13.1 0.1 0.069 12.7 0.1 1.2 1 0 0 1 1 1 0 Putative HNHc nuclease Sas10_Utp3 PF04000.15 ORF61091 - 4.4e-06 27.2 2.7 5.3e-06 27.0 0.1 2.1 2 0 0 2 2 2 1 Sas10/Utp3/C1D family TolA_bind_tri PF16331.5 ORF61091 - 0.08 13.0 0.6 0.7 10.0 0.0 2.3 2 0 0 2 2 2 0 TolA binding protein trimerisation Ctr PF04145.15 ORF59139 - 2.7e-09 37.8 11.9 3.4e-05 24.5 8.6 2.1 1 1 1 2 2 2 2 Ctr copper transporter family DUF4083 PF13314.6 ORF59139 - 0.00097 19.0 1.0 0.0039 17.1 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4083) DUF4229 PF14012.6 ORF59139 - 0.081 13.0 4.1 3.9 7.6 2.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) RseC_MucC PF04246.12 ORF59139 - 0.48 10.4 6.8 0.22 11.5 3.4 1.9 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF3487 PF11990.8 ORF59139 - 0.74 9.7 3.3 0.44 10.4 1.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3487) Phage_holin_3_6 PF07332.11 ORF59139 - 1.5 8.9 7.6 2.5 8.2 6.7 1.7 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Topoisom_bac PF01131.20 ORF5780 - 5.5e-24 84.9 0.0 6.5e-24 84.7 0.0 1.0 1 0 0 1 1 1 1 DNA topoisomerase DUF4050 PF13259.6 ORF57780 - 0.66 10.3 6.8 1 9.6 6.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) PCNA_N PF00705.18 ORF56014 - 3.4e-46 156.1 0.9 5.1e-46 155.5 0.5 1.4 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF56014 - 4.3e-07 29.6 0.1 5.6e-07 29.3 0.1 1.1 1 0 0 1 1 1 1 Rad9 PCNA_C PF02747.15 ORF56014 - 0.00014 22.0 0.8 0.068 13.3 0.0 2.8 2 1 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain Hus1 PF04005.12 ORF56014 - 0.044 12.9 0.1 0.049 12.7 0.1 1.2 1 0 0 1 1 1 0 Hus1-like protein Rad1 PF02144.16 ORF56014 - 0.071 12.2 1.9 1.1 8.2 0.6 1.9 1 1 1 2 2 2 0 Repair protein Rad1/Rec1/Rad17 DUF4886 PF16227.5 ORF56014 - 0.077 12.2 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4886) UL45 PF05473.12 ORF54720 - 0.07 12.8 1.2 0.13 11.9 1.1 1.6 1 1 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like DASH_Dad2 PF08654.10 ORF54673 - 0.2 12.1 0.0 0.25 11.8 0.0 1.1 1 0 0 1 1 1 0 DASH complex subunit Dad2 Lipin_mid PF16876.5 ORF54435 - 0.11 12.6 1.8 0.25 11.5 0.2 2.4 1 1 1 2 2 2 0 Lipin/Ned1/Smp2 multi-domain protein middle domain Ly49 PF08391.10 ORF54435 - 8.1 6.8 7.4 0.94 9.8 1.4 2.0 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region PP2C PF00481.21 ORF53400 - 4.2e-17 62.6 0.3 5e-17 62.4 0.3 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF53400 - 6.6e-07 29.2 0.8 7.9e-07 28.9 0.8 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PAE PF03283.13 ORF53400 - 0.08 12.1 0.1 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 Pectinacetylesterase SpoIIE PF07228.12 ORF53400 - 0.1 12.5 0.4 0.2 11.6 0.4 1.5 1 1 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) zf-CCCH PF00642.24 ORF52248 - 0.3 11.0 7.8 0.39 10.7 0.8 2.7 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) EF-hand_7 PF13499.6 ORF51971 - 1.1e-16 61.0 1.0 1.3e-10 41.6 0.7 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF51971 - 9.4e-14 50.1 3.8 9.8e-05 22.0 0.2 3.6 3 0 0 3 3 3 3 EF-hand domain EF-hand_1 PF00036.32 ORF51971 - 2.1e-13 48.8 2.7 0.00024 20.4 0.2 3.5 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF51971 - 9.6e-09 35.0 3.9 2.3e-05 24.1 0.7 3.6 3 1 1 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF51971 - 0.001 18.4 6.5 0.13 11.8 0.3 3.8 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF51971 - 0.0049 17.2 0.2 0.9 9.9 0.1 2.4 1 1 1 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF51971 - 0.057 12.0 0.0 0.064 11.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5580) Cyanate_lyase PF02560.14 ORF51929 - 1.1e-29 102.1 0.0 1.6e-29 101.5 0.0 1.3 1 0 0 1 1 1 1 Cyanate lyase C-terminal domain AFP PF02420.15 ORF51238 - 0.1 13.0 1.3 0.28 11.6 1.3 1.7 1 0 0 1 1 1 0 Insect antifreeze protein repeat CSG2 PF16965.5 ORF49052 - 0.037 13.0 1.0 0.046 12.7 1.0 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator DivIC PF04977.15 ORF49052 - 0.63 9.8 4.5 1.3 8.8 0.1 2.9 3 0 0 3 3 3 0 Septum formation initiator O-antigen_lig PF13425.6 ORF49052 - 3.4 6.3 4.7 4.1 6.1 4.7 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein SET PF00856.28 ORF48148 - 0.00075 19.9 0.0 0.0014 19.0 0.0 1.5 1 0 0 1 1 1 1 SET domain NAD_binding_1 PF00175.21 ORF47329 - 2.6e-08 34.4 0.0 1.1e-07 32.5 0.0 1.9 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 ORF47329 - 0.0021 18.2 0.5 0.045 13.9 0.5 2.2 1 1 0 1 1 1 1 Ferric reductase NAD binding domain NosL PF05573.12 ORF47329 - 0.051 13.9 0.0 0.77 10.1 0.0 2.1 2 0 0 2 2 2 0 NosL GASA PF02704.14 ORF42324 - 0.61 10.3 0.0 0.61 10.3 0.0 3.3 3 1 1 4 4 4 0 Gibberellin regulated protein DUF547 PF04784.14 ORF42030 - 5.4e-07 29.7 0.0 8.6e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF547 PdaC PF13739.6 ORF42030 - 0.014 16.3 0.5 0.014 16.3 0.5 1.6 2 0 0 2 2 2 0 Deacetylase PdaC Asp PF00026.23 ORF40275 - 1.6e-05 24.5 0.1 1.9e-05 24.2 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF40275 - 0.0033 17.2 0.0 0.0049 16.7 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Insulin_TMD PF17870.1 ORF39675 - 0.0011 19.0 0.0 0.0022 18.0 0.0 1.4 1 0 0 1 1 1 1 Insulin receptor trans-membrane segment EF-hand_7 PF13499.6 ORF39435 - 4.6e-10 39.8 0.7 1.2e-09 38.4 0.2 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF39435 - 1.8e-09 36.7 0.2 4.9e-05 22.9 0.5 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF39435 - 3.1e-08 32.6 0.3 2.8e-05 23.3 0.3 2.9 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF39435 - 2.5e-07 29.9 0.5 1.5e-05 24.2 0.3 2.9 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF39435 - 5e-07 29.5 0.1 1.7e-06 27.8 0.1 1.9 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_11 PF08976.11 ORF39435 - 9.3e-05 23.3 0.1 0.00023 22.0 0.0 1.6 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF38914 - 4.6e-10 39.8 0.7 1.2e-09 38.4 0.2 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF38914 - 1.8e-09 36.7 0.2 4.9e-05 22.9 0.5 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF38914 - 3.1e-08 32.6 0.3 2.8e-05 23.3 0.3 2.9 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF38914 - 2.5e-07 29.9 0.5 1.5e-05 24.2 0.3 2.9 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF38914 - 5e-07 29.5 0.1 1.7e-06 27.8 0.1 1.9 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_11 PF08976.11 ORF38914 - 9.3e-05 23.3 0.1 0.00023 22.0 0.0 1.6 2 0 0 2 2 2 1 EF-hand domain TraI_2 PF07514.11 ORF37515 - 0.1 11.5 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Putative helicase GST_C_2 PF13410.6 ORF37079 - 9e-14 51.3 0.0 1.4e-13 50.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF37079 - 2.9e-08 33.8 0.0 4e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF37079 - 1.9e-05 24.8 0.0 2.5e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF37079 - 0.04 13.7 0.0 0.076 12.8 0.0 1.5 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Tyr_Deacylase PF02580.16 ORF37034 - 1.9e-21 77.1 0.0 2.7e-21 76.6 0.0 1.1 1 0 0 1 1 1 1 D-Tyr-tRNA(Tyr) deacylase GST_C_6 PF17171.4 ORF37034 - 0.018 14.8 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Acp26Ab PF05777.12 ORF36521 - 0.16 12.7 0.6 5.9 7.6 0.1 2.4 1 1 1 2 2 2 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) SKI PF01202.22 ORF36489 - 5.9e-48 163.0 0.0 6.7e-48 162.8 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase AAA_18 PF13238.6 ORF36489 - 1.2e-07 32.4 0.0 1.9e-07 31.7 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 ORF36489 - 4e-06 27.3 0.0 0.00016 22.1 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF36489 - 9.3e-06 26.1 0.1 4.3e-05 24.0 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF36489 - 0.00013 21.9 0.0 0.00033 20.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 ORF36489 - 0.00015 22.0 0.1 0.00069 19.8 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 ORF36489 - 0.0018 18.6 0.0 0.0087 16.3 0.0 2.0 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF36489 - 0.0023 17.7 0.0 0.64 9.7 0.0 2.2 2 0 0 2 2 2 2 Thymidylate kinase AAA_14 PF13173.6 ORF36489 - 0.0023 18.0 0.0 0.0098 15.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain Cytidylate_kin2 PF13189.6 ORF36489 - 0.0035 17.5 0.0 0.03 14.5 0.0 2.1 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_25 PF13481.6 ORF36489 - 0.0042 16.7 0.3 0.011 15.3 0.3 1.7 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF36489 - 0.0059 17.0 0.0 0.012 16.0 0.0 1.6 1 0 0 1 1 1 1 RNA helicase Cytidylate_kin PF02224.18 ORF36489 - 0.0059 16.4 0.0 0.033 13.9 0.0 2.0 2 0 0 2 2 2 1 Cytidylate kinase TFIIA_gamma_N PF02268.16 ORF36489 - 0.039 14.0 0.1 0.15 12.1 0.1 2.0 2 0 0 2 2 2 0 Transcription initiation factor IIA, gamma subunit, helical domain AAA_19 PF13245.6 ORF36489 - 0.045 14.1 0.0 0.082 13.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF36489 - 0.047 13.6 0.0 0.44 10.4 0.0 2.0 2 0 0 2 2 2 0 NACHT domain Sigma54_activ_2 PF14532.6 ORF36489 - 0.069 13.3 0.0 0.18 11.9 0.0 1.8 2 0 0 2 2 1 0 Sigma-54 interaction domain Rad17 PF03215.15 ORF36489 - 0.078 12.9 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_7 PF12775.7 ORF36489 - 0.11 12.0 0.0 0.22 11.0 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF36489 - 0.17 12.4 0.0 0.34 11.4 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_24 PF13479.6 ORF36489 - 0.19 11.4 0.0 0.19 11.4 0.0 1.4 1 1 0 1 1 1 0 AAA domain NDUFA12 PF05071.16 ORF36124 - 1.9e-15 57.5 9.0 4e-15 56.4 9.0 1.6 1 1 0 1 1 1 1 NADH ubiquinone oxidoreductase subunit NDUFA12 Macoilin PF09726.9 ORF35763 - 0.42 9.1 8.0 0.47 8.9 8.0 1.0 1 0 0 1 1 1 0 Macoilin family DUF5643 PF18705.1 ORF35505 - 0.042 13.8 0.2 0.063 13.3 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5643) AI-2E_transport PF01594.16 ORF3468 - 0.00041 19.6 0.1 0.00048 19.4 0.1 1.1 1 0 0 1 1 1 1 AI-2E family transporter 7tm_7 PF08395.12 ORF3468 - 0.0026 17.0 0.5 0.003 16.8 0.5 1.1 1 0 0 1 1 1 1 7tm Chemosensory receptor DUF4834 PF16118.5 ORF3468 - 0.0035 18.3 0.1 2.4 9.2 0.5 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4834) FtsX PF02687.21 ORF3468 - 0.0072 16.8 6.0 0.011 16.2 6.0 1.2 1 0 0 1 1 1 1 FtsX-like permease family Ninjurin PF04923.12 ORF3468 - 0.0092 15.9 1.0 0.015 15.2 1.0 1.4 1 0 0 1 1 1 1 Ninjurin AA_permease PF00324.21 ORF3468 - 0.048 12.2 4.5 0.058 12.0 4.5 1.0 1 0 0 1 1 1 0 Amino acid permease DUF975 PF06161.11 ORF3468 - 0.059 13.2 7.9 0.077 12.8 7.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF975) Tetraspanin PF00335.20 ORF3468 - 0.35 10.5 4.6 0.48 10.1 4.6 1.2 1 0 0 1 1 1 0 Tetraspanin family SUR7 PF06687.12 ORF3468 - 0.36 10.4 7.1 0.2 11.2 5.3 1.4 1 1 1 2 2 2 0 SUR7/PalI family MpPF26 PF07666.11 ORF3468 - 0.79 9.8 13.4 2 8.6 13.4 1.5 1 1 0 1 1 1 0 M penetrans paralogue family 26 DHHC PF01529.20 ORF3468 - 0.82 9.8 5.3 1.3 9.1 5.3 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF3671 PF12420.8 ORF3468 - 1.8 8.6 10.1 2.9 8.0 10.1 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF2207 PF09972.9 ORF3468 - 3.4 6.3 6.6 3.3 6.4 0.1 1.5 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF3468 - 7.7 6.9 11.9 3.2 8.1 4.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) NDUFA12 PF05071.16 ORF34485 - 1.9e-15 57.5 9.0 4e-15 56.4 9.0 1.6 1 1 0 1 1 1 1 NADH ubiquinone oxidoreductase subunit NDUFA12 Apyrase PF06079.11 ORF34182 - 2.4e-51 174.7 0.0 2.6e-51 174.5 0.0 1.0 1 0 0 1 1 1 1 Apyrase Phage_holin_3_6 PF07332.11 ORF32731 - 0.031 14.3 1.8 3.3 7.8 0.0 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III PGA2 PF07543.12 ORF32731 - 0.033 14.2 0.2 0.055 13.5 0.2 1.3 1 0 0 1 1 1 0 Protein trafficking PGA2 DUF4131 PF13567.6 ORF32731 - 9.7 5.8 8.4 0.12 12.1 0.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Aldo_ket_red PF00248.21 ORF32601 - 3.7e-24 85.5 0.0 7.6e-24 84.4 0.0 1.5 1 1 0 1 1 1 1 Aldo/keto reductase family GFRP PF06399.13 ORF32601 - 0.11 12.4 0.1 6 6.8 0.1 2.3 1 1 1 2 2 2 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) DUF4849 PF16141.5 ORF31969 - 0.038 13.3 0.0 0.058 12.6 0.0 1.2 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 DUF3169 PF11368.8 ORF31969 - 0.62 9.5 12.3 0.12 11.9 4.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) DUF1056 PF06341.11 ORF31969 - 0.97 9.8 6.8 6.1 7.2 0.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1056) GASA PF02704.14 ORF31491 - 0.61 10.3 0.0 0.61 10.3 0.0 3.3 3 1 1 4 4 4 0 Gibberellin regulated protein Aa_trans PF01490.18 ORF3125 - 5e-12 45.3 2.2 5e-12 45.3 2.2 1.5 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein Snf7 PF03357.21 ORF30824 - 1.2e-16 60.8 8.2 1.5e-16 60.5 8.2 1.1 1 0 0 1 1 1 1 Snf7 DUF4749 PF15936.5 ORF30824 - 0.22 12.6 4.2 0.53 11.4 4.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4749) FAM167 PF11652.8 ORF30824 - 1.2 9.6 4.8 18 5.9 0.4 2.3 1 1 0 2 2 2 0 FAM167 Ribosomal_S17 PF00366.20 ORF30449 - 2.6e-18 65.9 0.8 2.6e-18 65.9 0.8 1.4 2 0 0 2 2 2 1 Ribosomal protein S17 PADR1 PF08063.12 ORF29889 - 1.8e-12 46.9 3.2 2.7e-12 46.3 3.2 1.3 1 0 0 1 1 1 1 PADR1 (NUC008) domain Peptidase_S41_N PF11918.8 ORF29889 - 0.016 15.5 0.2 0.037 14.3 0.1 1.6 1 1 0 1 1 1 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP Peptidase_M35 PF02102.15 ORF29889 - 0.7 8.7 8.9 0.86 8.4 8.9 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family PP2C PF00481.21 ORF29352 - 4.2e-17 62.6 0.3 5e-17 62.4 0.3 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF29352 - 6.9e-07 29.1 0.8 8.4e-07 28.8 0.8 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C PAE PF03283.13 ORF29352 - 0.079 12.1 0.1 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 Pectinacetylesterase SpoIIE PF07228.12 ORF29352 - 0.1 12.5 0.4 0.2 11.6 0.4 1.5 1 1 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) DUF2576 PF10845.8 ORF27541 - 0.02 14.5 0.4 0.054 13.1 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) CDKN3 PF05706.12 ORF25607 - 0.064 12.9 0.0 0.089 12.5 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) DUF4849 PF16141.5 ORF2357 - 0.038 13.3 0.0 0.058 12.6 0.0 1.2 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 DUF3169 PF11368.8 ORF2357 - 0.62 9.5 12.3 0.12 11.9 4.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) DUF1056 PF06341.11 ORF2357 - 0.97 9.8 6.8 6.1 7.2 0.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1056) Aldo_ket_red PF00248.21 ORF23071 - 6.3e-25 88.0 0.0 7.2e-25 87.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family RCC1_2 PF13540.6 ORF22297 - 3.1e-08 33.2 4.7 0.033 14.0 0.0 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Yuri_gagarin PF15934.5 ORF22297 - 0.0022 17.9 0.0 0.027 14.3 0.0 2.0 2 0 0 2 2 2 1 Yuri gagarin DUF155 PF02582.14 ORF22297 - 0.028 14.5 1.5 6.5 6.8 0.4 3.2 2 2 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 LRIF1 PF15741.5 ORF22088 - 0.12 10.8 0.2 0.18 10.3 0.2 1.1 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 DUF445 PF04286.12 ORF21546 - 0.028 14.2 4.3 0.039 13.8 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) UPF0029 PF01205.19 ORF21365 - 1.8e-16 60.4 0.1 2.9e-16 59.7 0.1 1.3 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 MORN PF02493.20 ORF21296 - 0.00093 19.0 0.3 0.62 10.1 0.1 2.5 2 0 0 2 2 2 2 MORN repeat Leu_zip PF15294.6 ORF19889 - 0.00029 20.4 0.4 0.00029 20.4 0.4 1.7 2 0 0 2 2 2 1 Leucine zipper GyrB_insert PF18053.1 ORF19889 - 0.0097 15.8 0.4 0.027 14.4 0.2 1.8 1 1 0 1 1 1 1 DNA gyrase B subunit insert domain K-box PF01486.17 ORF19889 - 0.016 15.3 11.9 1.2 9.3 0.4 3.7 4 0 0 4 4 4 0 K-box region SAS4 PF15460.6 ORF19889 - 0.024 14.7 2.3 0.033 14.3 0.0 2.2 2 1 0 2 2 2 0 Something about silencing, SAS, complex subunit 4 HALZ PF02183.18 ORF19889 - 0.075 13.3 0.1 0.075 13.3 0.1 3.8 4 0 0 4 4 4 0 Homeobox associated leucine zipper UPF0242 PF06785.11 ORF19889 - 0.095 12.8 3.9 0.12 12.5 1.7 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus HalX PF08663.10 ORF19889 - 0.2 12.0 7.4 0.21 11.9 0.4 2.6 2 0 0 2 2 2 0 HalX domain KASH_CCD PF14662.6 ORF19889 - 0.25 11.2 10.4 0.047 13.5 5.3 2.2 2 1 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Spc7 PF08317.11 ORF19889 - 0.26 10.1 5.3 1.2 7.9 5.3 1.9 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF4140 PF13600.6 ORF19889 - 0.52 10.8 10.2 3.3 8.2 0.1 3.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) ZapB PF06005.12 ORF19889 - 0.77 10.2 20.7 5 7.6 7.8 3.4 3 1 0 3 3 3 0 Cell division protein ZapB GIT_CC PF16559.5 ORF19889 - 1.1 9.2 8.4 1 9.3 0.1 3.2 3 0 0 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor YabA PF06156.13 ORF19889 - 3 8.5 7.3 7.6 7.2 1.7 3.1 3 1 0 3 3 3 0 Initiation control protein YabA GreA_GreB_N PF03449.15 ORF19889 - 9.7 6.4 12.4 6.4 7.0 0.2 3.5 4 0 0 4 4 4 0 Transcription elongation factor, N-terminal DUF2027 PF09640.10 ORF19834 - 0.0054 16.3 0.1 0.021 14.4 0.0 1.9 2 1 0 2 2 2 1 Domain of unknown function (DUF2027) DHHC PF01529.20 ORF17668 - 0.0014 18.8 8.8 0.002 18.2 8.8 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase Baculo_11_kDa PF06143.11 ORF17668 - 0.0034 16.9 2.1 0.17 11.5 0.0 2.6 2 0 0 2 2 2 2 Baculovirus 11 kDa family Tli4_C PF18426.1 ORF17575 - 0.0028 18.0 0.0 2.5 8.4 0.0 2.1 2 0 0 2 2 2 2 Tle cognate immunity protein 4 C-terminal domain DUF5319 PF17252.2 ORF17575 - 0.054 13.7 0.0 0.098 12.9 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5319) DUF4849 PF16141.5 ORF16682 - 0.038 13.3 0.0 0.058 12.6 0.0 1.2 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 DUF3169 PF11368.8 ORF16682 - 0.62 9.5 12.3 0.12 11.9 4.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) DUF1056 PF06341.11 ORF16682 - 0.97 9.8 6.8 6.1 7.2 0.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1056) EF-hand_7 PF13499.6 ORF15159 - 4.6e-10 39.8 0.7 1.2e-09 38.4 0.2 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF15159 - 1.8e-09 36.7 0.2 4.9e-05 22.9 0.5 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF15159 - 3.1e-08 32.6 0.3 2.8e-05 23.3 0.3 2.9 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF15159 - 2.5e-07 29.9 0.5 1.5e-05 24.2 0.3 2.9 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF15159 - 5e-07 29.5 0.1 1.7e-06 27.8 0.1 1.9 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_11 PF08976.11 ORF15159 - 9.3e-05 23.3 0.1 0.00023 22.0 0.0 1.6 2 0 0 2 2 2 1 EF-hand domain TTL PF03133.15 ORF11894 - 5.3e-15 55.3 1.1 8.2e-15 54.7 0.2 1.6 2 0 0 2 2 2 1 Tubulin-tyrosine ligase family Phage_holin_2_1 PF04971.12 ORF110937 - 0.093 12.7 2.9 0.62 10.1 0.0 2.7 3 0 0 3 3 3 0 Bacteriophage P21 holin S DUF1304 PF06993.12 ORF110937 - 0.55 10.2 7.0 0.11 12.5 3.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) Phage_holin_3_1 PF05106.12 ORF110937 - 1.2 9.6 7.5 0.23 11.9 0.4 2.1 1 1 1 2 2 2 0 Phage holin family (Lysis protein S) Man-6-P_recep PF02157.15 ORF110937 - 1.4 8.0 3.7 13 4.8 0.3 2.0 2 0 0 2 2 2 0 Mannose-6-phosphate receptor DUF4400 PF14348.6 ORF109627 - 0.084 12.4 1.0 0.13 11.8 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) MFMR_assoc PF16596.5 ORF109627 - 0.68 10.4 5.8 0.38 11.2 4.0 1.5 2 0 0 2 2 2 0 Disordered region downstream of MFMR RPN2_C PF18004.1 ORF108608 - 0.0072 16.3 2.0 0.0096 15.8 2.0 1.2 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN2 C-terminal domain Fer4_8 PF13183.6 ORF108608 - 0.0087 16.5 1.1 0.014 15.8 1.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Nucleo_P87 PF07267.11 ORF108608 - 0.051 12.4 0.3 0.056 12.3 0.3 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 DUF2098 PF09871.9 ORF108608 - 0.28 11.6 1.6 0.41 11.0 1.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) Pox_Ag35 PF03286.14 ORF108608 - 0.57 9.9 7.1 0.94 9.2 7.1 1.3 1 1 0 1 1 1 0 Pox virus Ag35 surface protein RRM_1 PF00076.22 ORF108175 - 0.00011 22.0 0.0 0.00015 21.5 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF108175 - 0.1 12.5 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Occluded RNA-recognition motif DUF676 PF05057.14 ORF108049 - 9.2e-22 77.6 0.1 1.2e-21 77.2 0.1 1.1 1 0 0 1 1 1 1 Putative serine esterase (DUF676) FmiP_Thoc5 PF09766.9 ORF107523 - 0.00062 19.2 5.3 0.00086 18.7 5.3 1.3 1 1 0 1 1 1 1 Fms-interacting protein/Thoc5 IFP_35_N PF07334.13 ORF107523 - 0.5 10.5 5.2 4.8 7.3 0.4 2.5 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DMPK_coil PF08826.10 ORF107523 - 4.4 7.5 14.5 0.11 12.7 5.5 2.5 3 0 0 3 3 3 0 DMPK coiled coil domain like Tctex-1 PF03645.13 ORF105629 - 1.6e-12 47.6 0.0 2.5e-12 46.9 0.0 1.3 1 0 0 1 1 1 1 Tctex-1 family DUF924 PF06041.11 ORF10279 - 3.1e-43 148.0 2.0 3.5e-43 147.8 2.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) UNC119_bdg PF15435.6 ORF101610 - 0.0032 17.0 1.3 0.004 16.7 1.3 1.3 1 0 0 1 1 1 1 UNC119-binding protein C5orf30 homologue Asp PF00026.23 ORF101288 - 1.6e-05 24.5 0.1 1.9e-05 24.2 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF101288 - 0.0033 17.2 0.0 0.0049 16.7 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal MFS_1 PF07690.16 NODE_40179_length_517_cov_2.043568_g32718_i0forward_frame_1 - 8.8e-09 34.7 4.6 1e-08 34.5 4.6 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 NODE_40179_length_517_cov_2.043568_g32718_i0forward_frame_1 - 2.9e-06 26.1 1.5 3.4e-06 25.9 1.5 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein TrmO PF01980.16 NODE_40177_length_517_cov_2.406639_g32716_i0reverse_frame_1 - 0.14 12.4 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 tRNA-methyltransferase O FAM76 PF16046.5 NODE_40166_length_517_cov_49.412863_g32705_i0forward_frame_1 - 0.024 14.0 9.6 0.029 13.7 9.6 1.0 1 0 0 1 1 1 0 FAM76 protein CENP-H PF05837.12 NODE_40166_length_517_cov_49.412863_g32705_i0forward_frame_1 - 0.049 14.0 3.3 0.1 13.1 3.3 1.6 1 0 0 1 1 1 0 Centromere protein H (CENP-H) YabA PF06156.13 NODE_40166_length_517_cov_49.412863_g32705_i0forward_frame_1 - 0.15 12.7 2.8 0.32 11.7 1.9 2.0 1 1 0 1 1 1 0 Initiation control protein YabA N-glycanase_C PF09113.10 NODE_40134_length_517_cov_337.228216_g32676_i0forward_frame_1 - 0.025 14.4 0.2 0.035 13.9 0.2 1.2 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal Thioredoxin PF00085.20 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 2.5e-19 69.2 0.0 3.7e-19 68.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 3.1e-05 23.5 0.0 3.9e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.00058 20.1 0.0 0.0019 18.5 0.0 1.8 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_7 PF13899.6 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.00067 19.8 0.8 0.0018 18.4 0.1 2.0 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_2 PF13098.6 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.0068 16.9 0.2 0.051 14.0 0.2 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain Phosducin PF02114.16 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.017 14.0 0.0 0.026 13.5 0.0 1.2 1 0 0 1 1 1 0 Phosducin AhpC-TSA PF00578.21 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.031 14.2 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 AhpC/TSA family SepF PF04472.12 NODE_40125_length_518_cov_2.192547_g32668_i0forward_frame_1 - 0.047 14.0 0.0 0.087 13.1 0.0 1.4 1 0 0 1 1 1 0 Cell division protein SepF DUF3461 PF11944.8 NODE_40125_length_518_cov_2.192547_g32668_i0forward_frame_1 - 0.34 11.0 3.3 1.5 9.0 0.2 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3461) TBPIP PF07106.13 NODE_40121_length_518_cov_3.031056_g32664_i0reverse_frame_1 - 0.13 12.2 0.8 12 6.0 0.0 2.8 3 0 0 3 3 3 0 TBPIP/Hop2 winged helix domain Borrelia_P83 PF05262.11 NODE_40121_length_518_cov_3.031056_g32664_i0reverse_frame_1 - 1.1 7.6 16.5 1.3 7.4 16.5 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Sec7_N PF12783.7 NODE_40121_length_518_cov_3.031056_g32664_i0forward_frame_1 - 0.72 9.7 9.6 0.76 9.7 8.2 1.5 1 1 1 2 2 2 0 Guanine nucleotide exchange factor in Golgi transport N-terminal MINDY_DUB PF04424.13 NODE_40115_length_518_cov_4.358178_g32658_i0reverse_frame_1 - 0.064 13.3 0.6 0.13 12.3 0.4 1.7 1 1 1 2 2 2 0 MINDY deubiquitinase ASFV_L11L PF05293.11 NODE_40115_length_518_cov_4.358178_g32658_i0forward_frame_1 - 0.41 11.0 4.1 0.34 11.3 0.3 2.1 2 0 0 2 2 2 0 African swine fever virus (ASFV) L11L protein DUF3987 PF13148.6 NODE_40112_length_518_cov_28.716356_g32655_i0reverse_frame_1 - 0.19 10.7 0.0 0.24 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) MMR_HSR1 PF01926.23 NODE_40108_length_518_cov_79.575569_g32652_i0forward_frame_1 - 4e-05 23.7 0.0 7.9e-05 22.7 0.0 1.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 NODE_40108_length_518_cov_79.575569_g32652_i0forward_frame_1 - 0.00056 19.5 0.0 0.0016 18.0 0.0 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 NODE_40108_length_518_cov_79.575569_g32652_i0forward_frame_1 - 0.0022 18.1 0.0 0.004 17.2 0.0 1.4 1 0 0 1 1 1 1 Dynamin family HGTP_anticodon PF03129.20 NODE_40106_length_518_cov_84.877847_g32650_i0reverse_frame_1 - 5.5e-14 52.1 0.0 9.4e-14 51.3 0.0 1.4 1 0 0 1 1 1 1 Anticodon binding domain Herpes_UL55 PF04537.12 NODE_40097_length_518_cov_150.354037_g32641_i0reverse_frame_1 - 0.027 14.5 0.3 0.057 13.4 0.3 1.6 1 1 0 1 1 1 0 Herpesvirus UL55 protein Crisp PF08562.10 NODE_40095_length_518_cov_157.985507_g32639_i0forward_frame_1 - 8.8 7.0 20.1 0.49 11.0 1.2 3.1 3 0 0 3 3 3 0 Crisp Pox_A14 PF05767.12 NODE_40091_length_518_cov_209.333333_g32636_i0forward_frame_1 - 0.25 11.5 5.3 0.68 10.1 0.1 2.6 2 1 1 3 3 3 0 Poxvirus virion envelope protein A14 Sarcoglycan_1 PF04790.13 NODE_40074_length_519_cov_3.082645_g32620_i0forward_frame_1 - 0.023 14.0 2.3 0.032 13.6 2.3 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein DUF5084 PF16894.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_1 - 0.025 15.0 1.8 0.046 14.2 1.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5084) DUF4917 PF16263.5 NODE_40067_length_519_cov_74.553719_g32613_i0forward_frame_1 - 0.023 14.1 0.4 0.033 13.5 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4917) GP38 PF05268.11 NODE_40047_length_519_cov_125.202479_g32593_i0forward_frame_1 - 0.0018 18.0 3.3 0.079 12.6 0.0 2.0 2 0 0 2 2 2 2 Phage tail fibre adhesin Gp38 Gemini_AL3 PF01407.17 NODE_40017_length_520_cov_2.653608_g32566_i0reverse_frame_2 - 0.0018 18.1 1.9 0.0026 17.6 1.9 1.3 1 0 0 1 1 1 1 Geminivirus AL3 protein Corona_5a PF06336.11 NODE_40017_length_520_cov_2.653608_g32566_i0reverse_frame_2 - 0.077 13.0 5.6 0.12 12.3 0.7 2.5 2 0 0 2 2 2 0 Coronavirus 5a protein DUF22 PF01629.16 NODE_40017_length_520_cov_2.653608_g32566_i0forward_frame_3 - 0.088 12.5 1.4 0.19 11.5 0.5 1.9 2 0 0 2 2 2 0 Domain of unknown function DUF22 Glycos_transf_2 PF00535.26 NODE_40015_length_520_cov_2.851546_g32564_i0reverse_frame_2 - 1e-12 48.2 0.0 1.2e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 NODE_40015_length_520_cov_2.851546_g32564_i0reverse_frame_2 - 0.00059 19.4 0.0 0.00068 19.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 NODE_40015_length_520_cov_2.851546_g32564_i0reverse_frame_2 - 0.002 18.1 0.0 0.0023 17.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 NODE_40015_length_520_cov_2.851546_g32564_i0reverse_frame_2 - 0.012 16.1 0.0 0.018 15.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 zf-RING_2 PF13639.6 NODE_40011_length_520_cov_3.995876_g32560_i0reverse_frame_2 - 0.0011 19.3 0.3 0.015 15.7 0.1 2.1 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_40011_length_520_cov_3.995876_g32560_i0reverse_frame_2 - 0.0035 17.6 0.2 0.0062 16.8 0.2 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_40011_length_520_cov_3.995876_g32560_i0reverse_frame_2 - 0.086 12.7 0.5 0.49 10.3 0.2 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) RPAP3_C PF13877.6 NODE_40010_length_520_cov_4.746392_g32559_i0forward_frame_3 - 0.0085 16.6 0.5 0.013 16.0 0.5 1.3 1 0 0 1 1 1 1 Potential Monad-binding region of RPAP3 Sec1 PF00995.23 NODE_40007_length_520_cov_9.150515_g32556_i0forward_frame_2 - 1.5e-17 64.1 0.3 1.8e-17 63.8 0.3 1.1 1 0 0 1 1 1 1 Sec1 family Reo_sigmaC_M PF17750.1 NODE_40002_length_520_cov_67.152577_g32552_i0reverse_frame_3 - 0.055 13.3 0.1 0.095 12.6 0.1 1.4 1 0 0 1 1 1 0 Reovirus sigma C capsid protein triple beta spiral WG_beta_rep PF14903.6 NODE_39998_length_520_cov_70.352577_g32548_i0forward_frame_3 - 0.047 14.0 0.1 0.1 12.9 0.1 1.5 1 0 0 1 1 1 0 WG containing repeat NPCC PF08058.11 NODE_39998_length_520_cov_70.352577_g32548_i0forward_frame_3 - 0.11 12.5 0.4 0.2 11.7 0.4 1.3 1 0 0 1 1 1 0 Nuclear pore complex component Ago_N_1 PF18351.1 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 0.67 10.4 9.3 2.5 8.6 1.7 2.8 1 1 2 3 3 3 0 Fungal Argonaute N-terminal domain Toxin_trans PF07952.12 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 1.3 8.1 8.9 1.6 7.8 8.9 1.1 1 0 0 1 1 1 0 Clostridium neurotoxin, Translocation domain DUF4047 PF13256.6 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 1.6 8.9 19.7 0.86 9.8 5.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4047) UPF0242 PF06785.11 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 3 7.9 25.9 4.6 7.3 25.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 4.6 6.5 20.8 6.1 6.1 20.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) COX2_TM PF02790.15 NODE_39993_length_520_cov_85.478351_g32544_i0forward_frame_2 - 0.061 13.5 0.5 0.13 12.5 0.5 1.5 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain YrhC PF14143.6 NODE_39993_length_520_cov_85.478351_g32544_i0forward_frame_2 - 0.41 10.8 0.1 0.41 10.8 0.1 2.0 3 0 0 3 3 3 0 YrhC-like protein QLQ PF08880.11 NODE_39983_length_520_cov_132.006186_g32534_i0reverse_frame_3 - 0.13 12.1 0.3 0.22 11.3 0.3 1.4 1 0 0 1 1 1 0 QLQ zf-B_box PF00643.24 NODE_39983_length_520_cov_132.006186_g32534_i0reverse_frame_3 - 3.4 7.9 17.0 0.64 10.2 12.9 1.8 2 0 0 2 2 2 0 B-box zinc finger ABC_tran PF00005.27 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 7.7e-32 110.7 0.1 9.1e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 8.2e-07 29.1 0.8 0.00083 19.3 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 4.7e-05 22.9 0.3 0.046 13.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0011 18.6 0.1 0.0019 17.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.002 18.2 0.0 0.0038 17.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF87 PF01935.17 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0041 17.2 0.2 0.0088 16.2 0.1 1.6 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_23 PF13476.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0071 16.9 3.1 0.023 15.2 3.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0091 15.8 0.1 0.013 15.3 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0095 15.7 0.0 0.026 14.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.033 14.6 0.0 0.038 14.4 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.04 13.6 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DEAD PF00270.29 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.052 13.3 1.5 0.22 11.3 1.5 1.8 1 1 0 1 1 1 0 DEAD/DEAH box helicase DUF505 PF04458.12 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.053 11.9 0.0 0.069 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) CsoSCA PF08936.10 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.053 12.2 0.1 0.07 11.8 0.1 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase NB-ARC PF00931.22 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.1 11.8 0.9 0.27 10.4 0.9 1.8 1 1 0 1 1 1 0 NB-ARC domain AAA_22 PF13401.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.1 12.8 0.2 1.3 9.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.31 10.7 1.4 0.65 9.7 1.4 1.4 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 1e-32 113.5 0.1 1.2e-32 113.3 0.1 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 2.3e-07 31.0 0.9 0.00074 19.4 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 5e-05 22.9 0.3 0.045 13.2 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0011 18.6 0.1 0.0019 17.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0019 18.3 0.0 0.0036 17.4 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TrwB_AAD_bind PF10412.9 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0024 16.9 0.6 0.009 15.0 0.6 1.7 1 1 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain DUF87 PF01935.17 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0038 17.3 0.2 0.0088 16.2 0.1 1.6 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_15 PF13175.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0064 16.2 0.6 0.014 15.1 0.6 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0068 16.9 2.9 0.0069 16.9 0.2 1.9 1 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0076 16.0 0.0 0.018 14.7 0.0 1.6 1 1 0 1 1 1 1 AAA domain DEAD PF00270.29 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.037 13.8 1.5 0.16 11.8 1.5 1.8 1 1 0 1 1 1 0 DEAD/DEAH box helicase ATP-synt_ab PF00006.25 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.039 13.6 0.0 0.039 13.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_16 PF13191.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.041 14.3 0.1 0.044 14.1 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.089 13.1 0.2 1.2 9.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.15 11.3 1.8 0.46 9.6 1.8 1.9 1 1 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.39 10.4 2.3 0.8 9.4 2.3 1.4 1 1 0 1 1 1 0 AAA domain DUF3566 PF12089.8 NODE_39954_length_521_cov_5.621399_g32509_i0forward_frame_3 - 0.015 15.7 0.2 0.022 15.1 0.2 1.2 1 0 0 1 1 1 0 Transmembrane domain of unknown function (DUF3566) FAD_binding_3 PF01494.19 NODE_39950_length_521_cov_65.273663_g32506_i0reverse_frame_2 - 1.3e-07 31.2 0.0 1.6e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 NODE_39950_length_521_cov_65.273663_g32506_i0reverse_frame_2 - 0.0014 17.8 0.0 0.0017 17.5 0.0 1.1 1 0 0 1 1 1 1 Squalene epoxidase Lycopene_cycl PF05834.12 NODE_39950_length_521_cov_65.273663_g32506_i0reverse_frame_2 - 0.19 10.8 0.0 0.23 10.4 0.0 1.1 1 0 0 1 1 1 0 Lycopene cyclase protein Spem1 PF15670.5 NODE_39949_length_521_cov_65.971193_g32505_i0forward_frame_3 - 0.025 14.2 0.0 0.031 13.9 0.0 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 Pkinase PF00069.25 NODE_39949_length_521_cov_65.971193_g32505_i0forward_frame_2 - 7.2e-10 38.7 0.0 1e-09 38.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_39949_length_521_cov_65.971193_g32505_i0forward_frame_2 - 0.063 12.6 0.0 0.088 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase DUF4227 PF14004.6 NODE_39948_length_521_cov_66.816872_g32504_i0forward_frame_3 - 9 6.4 7.7 0.4 10.7 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) Jagunal PF07086.12 NODE_39948_length_521_cov_66.816872_g32504_i0forward_frame_3 - 9.4 6.3 9.8 55 3.7 9.8 2.0 1 1 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis ECH_1 PF00378.20 NODE_39934_length_521_cov_128.191358_g32491_i0forward_frame_2 - 1.9e-06 27.4 0.1 2.5e-06 27.0 0.1 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase T6SS-SciN PF12790.7 NODE_39902_length_522_cov_3.377823_g32465_i0forward_frame_3 - 8.9e-05 22.2 0.0 0.00012 21.7 0.0 1.2 1 0 0 1 1 1 1 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 Pept_tRNA_hydro PF01195.19 NODE_39896_length_522_cov_71.219713_g32459_i0forward_frame_3 - 5.8e-21 75.2 0.0 7.3e-21 74.9 0.0 1.1 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase Osteoregulin PF07175.11 NODE_39895_length_522_cov_71.913758_g32458_i0reverse_frame_3 - 0.023 14.9 0.5 0.037 14.2 0.5 1.5 1 0 0 1 1 1 0 Osteoregulin TMEM237 PF15383.6 NODE_39895_length_522_cov_71.913758_g32458_i0reverse_frame_2 - 5.2 6.1 6.3 6.8 5.7 6.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 237 CbeA_antitoxin PF06154.11 NODE_39889_length_522_cov_86.677618_g32453_i0reverse_frame_3 - 0.15 12.7 0.0 0.24 12.0 0.0 1.3 1 0 0 1 1 1 0 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks122.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks122.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks122.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks122.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:49:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SDH_sah PF01972.16 NODE_39889_length_522_cov_86.677618_g32453_i0forward_frame_2 - 0.083 11.9 0.3 0.12 11.4 0.3 1.1 1 0 0 1 1 1 0 Serine dehydrogenase proteinase Piezo_RRas_bdg PF12166.8 NODE_39877_length_522_cov_105.289528_g32442_i0reverse_frame_2 - 7.8e-05 22.1 0.0 0.00011 21.6 0.0 1.2 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain Dscam_C PF12355.8 NODE_39876_length_522_cov_110.273101_g32441_i0forward_frame_2 - 0.014 16.3 0.6 0.014 16.3 0.6 1.5 2 0 0 2 2 2 0 Down syndrome cell adhesion molecule C terminal YqzH PF14164.6 NODE_39876_length_522_cov_110.273101_g32441_i0forward_frame_2 - 1.7 8.8 6.2 0.98 9.5 3.0 2.1 2 0 0 2 2 2 0 YqzH-like protein FKBP_C PF00254.28 NODE_39871_length_522_cov_138.728953_g32436_i0forward_frame_3 - 2.8e-18 66.0 0.0 3.9e-18 65.6 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Phospholip_A2_2 PF05826.12 NODE_39871_length_522_cov_138.728953_g32436_i0forward_frame_2 - 0.026 14.8 0.0 0.039 14.2 0.0 1.3 1 0 0 1 1 1 0 Phospholipase A2 Shisa PF13908.6 NODE_39870_length_522_cov_148.141684_g32435_i0forward_frame_2 - 2 8.6 2.7 2.6 8.3 2.7 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF2070 PF09843.9 NODE_39870_length_522_cov_148.141684_g32435_i0forward_frame_2 - 2.4 6.3 12.5 3 6.0 12.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DHHC PF01529.20 NODE_39870_length_522_cov_148.141684_g32435_i0forward_frame_2 - 6.7 6.8 7.6 1.4 9.0 3.7 1.8 1 1 1 2 2 2 0 DHHC palmitoyltransferase Rubis-subs-bind PF09273.11 NODE_39868_length_522_cov_205.129363_g32433_i0reverse_frame_3 - 1.5e-07 32.2 0.7 2e-07 31.7 0.7 1.2 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding FGFR3_TM PF18123.1 NODE_39864_length_522_cov_329.180698_g32429_i0reverse_frame_2 - 2.5 7.7 6.5 4 7.1 1.0 2.4 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Presenilin PF01080.17 NODE_39864_length_522_cov_329.180698_g32429_i0forward_frame_3 - 2.7 6.7 5.1 3.6 6.3 5.1 1.1 1 0 0 1 1 1 0 Presenilin SLATT_5 PF18160.1 NODE_39862_length_522_cov_393.942505_g28452_i1reverse_frame_3 - 0.27 10.5 2.9 0.36 10.1 2.9 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 DNA_III_psi PF03603.13 NODE_39862_length_522_cov_393.942505_g28452_i1forward_frame_2 - 0.15 12.3 0.3 0.22 11.7 0.3 1.2 1 0 0 1 1 1 0 DNA polymerase III psi subunit zf-LITAF-like PF10601.9 NODE_39858_length_522_cov_1404.788501_g32425_i0reverse_frame_3 - 6.6e-13 48.7 10.6 1e-12 48.1 10.6 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain PXPV PF12778.7 NODE_39858_length_522_cov_1404.788501_g32425_i0reverse_frame_3 - 1.9 8.4 15.9 0.19 11.6 10.1 2.4 2 1 0 2 2 2 0 PXPV repeat (3 copies) CBP_BcsG PF11658.8 NODE_39858_length_522_cov_1404.788501_g32425_i0forward_frame_2 - 0.042 12.2 0.0 0.05 12.0 0.0 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG eIF_4EBP PF05456.11 ORF99869 - 0.068 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Jacalin PF01419.17 ORF98223 - 1.1e-07 31.8 0.2 1.4e-07 31.5 0.2 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain SDA1 PF05285.12 ORF9811 - 0.26 10.6 15.8 0.37 10.2 15.8 1.2 1 0 0 1 1 1 0 SDA1 Presenilin PF01080.17 ORF9811 - 0.38 9.5 11.9 0.48 9.1 11.9 1.2 1 0 0 1 1 1 0 Presenilin Raftlin PF15250.6 ORF9811 - 3 6.5 8.7 3.3 6.3 8.7 1.1 1 0 0 1 1 1 0 Raftlin BRX PF08381.11 ORF97570 - 0.043 13.2 0.8 0.32 10.4 0.1 2.3 2 0 0 2 2 2 0 Transcription factor regulating root and shoot growth via Pin3 DUF1097 PF06496.11 ORF94920 - 3.3e-38 131.1 26.1 4e-38 130.8 26.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1097) PPR_2 PF13041.6 ORF93959 - 9.4e-23 80.2 0.1 9.1e-12 45.0 0.0 3.6 1 1 2 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF93959 - 1.6e-12 47.3 0.0 2.2e-11 43.6 0.0 2.4 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF93959 - 2.6e-10 39.8 0.0 0.0011 18.6 0.0 3.2 3 1 0 3 3 3 2 PPR repeat PPR PF01535.20 ORF93959 - 3.3e-08 33.3 0.0 0.024 14.9 0.0 3.7 4 0 0 4 4 4 2 PPR repeat DUF4482 PF14818.6 ORF93569 - 0.022 15.7 1.1 0.031 15.2 0.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4482) PSS PF03034.15 ORF93281 - 4.1e-42 144.8 1.0 6.7e-42 144.1 1.0 1.3 1 0 0 1 1 1 1 Phosphatidyl serine synthase YoqO PF14037.6 ORF93281 - 0.55 10.8 6.7 0.11 13.0 2.5 2.0 2 1 0 2 2 2 0 YoqO-like protein OTU PF02338.19 ORF93200 - 1.8e-08 34.9 0.4 3e-08 34.2 0.0 1.5 2 0 0 2 2 2 1 OTU-like cysteine protease CSD PF00313.22 ORF92757 - 0.00038 20.3 1.3 0.00087 19.1 1.3 1.7 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF92757 - 0.00062 19.4 0.1 0.0011 18.6 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain CSD2 PF17876.1 ORF92757 - 0.037 14.2 0.0 0.066 13.4 0.0 1.3 1 0 0 1 1 1 0 Cold shock domain SH3BP5 PF05276.14 ORF92757 - 0.33 10.7 3.6 1.6 8.4 3.6 1.8 1 1 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) RRF PF01765.19 ORF92548 - 6.8e-63 211.5 1.3 7.6e-63 211.3 1.3 1.0 1 0 0 1 1 1 1 Ribosome recycling factor Tetraspanin PF00335.20 ORF9161 - 0.05 13.3 4.0 0.025 14.3 1.7 1.6 1 1 1 2 2 2 0 Tetraspanin family Pkinase PF00069.25 ORF90542 - 1.9e-06 27.5 1.1 2.4e-06 27.1 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90542 - 0.0098 15.2 0.1 0.017 14.4 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 ORF90542 - 0.067 13.4 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 ABC1 family Imm7 PF15585.6 ORF90542 - 0.097 13.0 0.3 0.14 12.4 0.3 1.2 1 0 0 1 1 1 0 Immunity protein 7 Cation_ATPase_C PF00689.21 ORF88656 - 0.065 12.9 3.5 0.085 12.6 3.5 1.3 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus Pox_L5 PF04872.13 ORF87608 - 0.05 13.5 0.0 0.15 11.9 0.0 1.8 2 0 0 2 2 2 0 Poxvirus L5 protein family SH3_2 PF07653.17 ORF87282 - 3.5e-05 23.4 0.0 6.4e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_9 PF14604.6 ORF87282 - 0.0009 19.1 0.1 0.0018 18.1 0.1 1.5 1 0 0 1 1 1 1 Variant SH3 domain EF-hand_1 PF00036.32 ORF86309 - 1.5e-08 33.6 0.9 0.1 12.2 0.1 4.2 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF86309 - 1.2e-05 24.9 1.3 3.2 7.9 0.1 4.0 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF86309 - 2.9e-05 24.4 0.2 0.016 15.6 0.1 2.9 2 2 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF86309 - 1.1 8.9 11.2 5.7 6.6 0.1 3.9 4 1 0 4 4 4 0 EF hand DAGK_cat PF00781.24 ORF85396 - 0.056 13.1 0.0 0.089 12.4 0.0 1.4 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain WDCP PF15390.6 ORF85396 - 0.084 11.2 0.0 0.097 11.0 0.0 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family PIF1 PF05970.14 ORF84816 - 0.045 12.9 1.8 0.058 12.5 1.8 1.1 1 0 0 1 1 1 0 PIF1-like helicase DMRL_synthase PF00885.19 ORF82844 - 2e-55 186.5 0.8 2.4e-55 186.2 0.8 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DUF2838 PF10998.8 ORF8209 - 1.3e-06 28.6 14.9 1.8e-06 28.1 14.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) FAP PF07174.11 ORF8198 - 1.6 8.1 19.5 2.1 7.7 19.5 1.3 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DUF1825 PF08855.10 ORF80561 - 2.1e-16 59.7 0.0 3.3e-16 59.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1825) DUF3670 PF12419.8 ORF80561 - 0.075 12.9 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 SNF2 Helicase protein Cation_ATPase_C PF00689.21 ORF79510 - 0.065 12.9 3.5 0.085 12.6 3.5 1.3 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus HTH_28 PF13518.6 ORF78644 - 1.4e-21 76.4 1.1 7.9e-10 38.7 0.3 2.5 3 0 0 3 3 3 2 Helix-turn-helix domain HTH_29 PF13551.6 ORF78644 - 5e-10 39.3 0.1 0.00086 19.3 0.0 2.3 2 0 0 2 2 2 2 Winged helix-turn helix HTH_23 PF13384.6 ORF78644 - 4.7e-09 35.8 1.2 3.3e-05 23.5 0.0 3.0 2 1 0 2 2 2 2 Homeodomain-like domain HTH_32 PF13565.6 ORF78644 - 6.9e-08 33.0 0.1 0.0058 17.2 0.0 2.3 2 0 0 2 2 2 2 Homeodomain-like domain DUF1153 PF06627.11 ORF78644 - 1.2e-05 25.3 0.1 0.0028 17.8 0.1 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1153) HTH_Tnp_1 PF01527.20 ORF78644 - 0.00058 20.1 1.6 0.0021 18.3 0.0 2.5 2 1 1 3 3 3 1 Transposase DUF4817 PF16087.5 ORF78644 - 0.013 15.2 0.3 12 5.7 0.2 3.7 3 1 0 3 3 3 0 Helix-turn-helix domain (DUF4817) BrkDBD PF09607.10 ORF78644 - 0.14 11.9 0.0 0.63 9.9 0.0 2.0 2 0 0 2 2 2 0 Brinker DNA-binding domain TPKR_C2 PF16920.5 ORF78644 - 0.24 11.5 0.1 1.1 9.5 0.0 1.9 2 0 0 2 2 2 0 Tyrosine-protein kinase receptor C2 Ig-like domain P66_CC PF16563.5 ORF78644 - 0.97 9.1 4.8 2.2 7.9 4.8 1.6 1 0 0 1 1 1 0 Coiled-coil and interaction region of P66A and P66B with MBD2 Glyco_transf_36 PF06165.11 ORF78320 - 0.029 13.8 3.1 0.024 14.1 1.7 1.5 1 1 1 2 2 2 0 Glycosyltransferase family 36 ATAD4 PF15321.6 ORF78320 - 0.037 15.3 5.6 0.037 15.3 5.6 2.3 1 1 1 2 2 2 0 ATPase family AAA domain containing 4 AMIN PF11741.8 ORF78320 - 0.057 13.5 0.9 0.098 12.8 0.9 1.4 1 0 0 1 1 1 0 AMIN domain Dus PF01207.17 ORF74042 - 9.3e-05 21.7 0.0 0.00021 20.5 0.0 1.5 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) Defb50 PF17546.2 ORF73936 - 0.042 13.8 1.5 0.07 13.0 1.5 1.3 1 0 0 1 1 1 0 Beta defensin 50 IMPa_N_2 PF18650.1 ORF73936 - 0.047 13.0 0.1 3.1 7.0 0.0 2.1 2 0 0 2 2 2 0 Immunomodulating metalloprotease N-terminal domain PI31_Prot_N PF11566.8 ORF72134 - 0.066 13.0 3.1 0.085 12.7 3.1 1.3 1 1 0 1 1 1 0 PI31 proteasome regulator N-terminal Peptidase_C1 PF00112.23 ORF71882 - 2.1e-39 135.9 3.2 2.3e-39 135.7 3.2 1.0 1 0 0 1 1 1 1 Papain family cysteine protease DUF3303 PF11746.8 ORF71143 - 0.0064 16.7 0.0 0.012 15.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) UAA PF08449.11 ORF70218 - 2.9e-35 122.0 3.8 3.5e-35 121.7 3.8 1.0 1 0 0 1 1 1 1 UAA transporter family TPT PF03151.16 ORF70218 - 0.00038 19.9 0.2 0.00045 19.7 0.2 1.2 1 0 0 1 1 1 1 Triose-phosphate Transporter family Exo_endo_phos PF03372.23 ORF68208 - 0.028 14.0 0.1 0.036 13.6 0.1 1.3 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family ArAE_1_C PF11728.8 ORF68000 - 0.00095 19.2 0.6 0.0065 16.5 0.1 2.1 1 1 1 2 2 2 1 Putative aromatic acid exporter C-terminal domain LON_substr_bdg PF02190.16 ORF68000 - 0.0018 18.2 1.5 0.026 14.4 0.1 2.2 2 0 0 2 2 2 1 ATP-dependent protease La (LON) substrate-binding domain PhaP_Bmeg PF09602.10 ORF68000 - 0.024 14.6 3.4 0.073 13.0 1.3 2.0 1 1 1 2 2 2 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) AKAP28 PF14469.6 ORF66853 - 4.2e-12 45.9 1.7 6.8e-12 45.2 1.7 1.4 1 1 0 1 1 1 1 28 kDa A-kinase anchor Spec3 PF15795.5 ORF66251 - 1.5e-09 38.3 16.4 0.00017 22.1 0.3 2.1 1 1 1 2 2 2 2 Ectodermal ciliogenesis protein Methyltransf_25 PF13649.6 ORF64542 - 1.2e-13 51.5 0.0 1.8e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF64542 - 2.6e-12 46.8 0.0 3.5e-12 46.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF64542 - 1.5e-10 41.2 0.0 1.6e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF64542 - 6.9e-10 39.4 0.0 1.2e-09 38.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF64542 - 9.5e-09 35.9 0.0 1.4e-08 35.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 ORF64542 - 6.8e-05 22.8 0.0 8.8e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF64542 - 0.00012 21.7 0.0 0.00016 21.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF64542 - 0.00044 20.3 0.0 0.00061 19.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF64542 - 0.00071 19.2 0.0 0.0016 18.0 0.0 1.6 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_9 PF08003.11 ORF64542 - 0.0027 16.7 0.0 0.0041 16.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Ubie_methyltran PF01209.18 ORF64542 - 0.0052 16.1 0.0 0.0077 15.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family AdoMet_MTase PF07757.13 ORF64542 - 0.0091 16.3 0.1 0.14 12.5 0.1 2.2 1 1 1 2 2 2 1 Predicted AdoMet-dependent methyltransferase PrmA PF06325.13 ORF64542 - 0.012 15.1 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 ORF64542 - 0.012 14.9 0.0 0.021 14.1 0.0 1.4 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase DREV PF05219.12 ORF64542 - 0.054 12.6 0.0 0.07 12.2 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase PCMT PF01135.19 ORF64542 - 0.085 12.6 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 ORF64542 - 0.092 11.8 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase TrkA_N PF02254.18 ORF64542 - 0.11 12.7 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Jacalin PF01419.17 ORF64226 - 4.7e-08 33.0 0.2 6.1e-08 32.7 0.2 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain Flavodoxin_1 PF00258.25 ORF6345 - 3.2e-28 98.7 0.0 3.7e-28 98.5 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 ORF6345 - 0.0062 16.2 0.0 0.015 15.0 0.0 1.7 1 1 0 1 1 1 1 Flavodoxin domain Fer4_23 PF18009.1 ORF63250 - 0.078 13.4 3.4 0.11 13.0 1.4 2.1 2 0 0 2 2 2 0 4Fe-4S iron-sulfur cluster binding domain FoP_duplication PF13865.6 ORF6302 - 1.4e-13 51.2 20.8 1.4e-13 51.2 20.8 3.3 1 1 1 2 2 2 1 C-terminal duplication domain of Friend of PRMT1 DnaJ PF00226.31 ORF60576 - 7.9e-26 90.0 3.3 1.1e-25 89.5 3.3 1.2 1 0 0 1 1 1 1 DnaJ domain DnaJ_C PF01556.18 ORF60576 - 0.082 13.0 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 DnaJ C terminal domain DUF3810 PF12725.7 ORF60576 - 0.091 12.1 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Synaptobrevin PF00957.21 ORF59774 - 0.013 15.2 0.9 0.026 14.3 0.9 1.4 1 0 0 1 1 1 0 Synaptobrevin MARVEL PF01284.23 ORF59148 - 0.012 15.6 3.8 0.13 12.3 0.4 2.1 2 0 0 2 2 2 0 Membrane-associating domain DUF2976 PF11190.8 ORF59148 - 0.04 13.7 4.2 0.12 12.2 0.1 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF2976) Cornichon PF03311.14 ORF59148 - 0.18 12.1 6.9 0.056 13.8 1.1 2.2 2 1 0 2 2 2 0 Cornichon protein DHHC PF01529.20 ORF59148 - 0.4 10.8 8.2 0.34 11.0 5.8 1.8 1 1 1 2 2 2 0 DHHC palmitoyltransferase PPR_2 PF13041.6 ORF56666 - 9.4e-23 80.2 0.1 9.1e-12 45.0 0.0 3.6 1 1 2 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF56666 - 1.6e-12 47.3 0.0 2.2e-11 43.6 0.0 2.4 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF56666 - 2.6e-10 39.8 0.0 0.0011 18.6 0.0 3.2 3 1 0 3 3 3 2 PPR repeat PPR PF01535.20 ORF56666 - 3.3e-08 33.3 0.0 0.024 14.9 0.0 3.7 4 0 0 4 4 4 2 PPR repeat DUF4976 PF16347.5 ORF54302 - 0.016 15.5 0.0 0.024 14.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) Sulfatase_C PF14707.6 ORF54302 - 0.051 14.3 0.0 0.089 13.5 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase Paf1 PF03985.13 ORF54179 - 8.5e-05 21.7 0.0 0.089 11.8 0.0 2.0 1 1 0 2 2 2 2 Paf1 MVL PF12151.8 ORF53571 - 0.039 13.8 0.8 0.083 12.8 0.8 1.6 1 0 0 1 1 1 0 Mannan-binding protein EF-hand_1 PF00036.32 ORF53241 - 2.8e-10 39.0 1.4 0.00054 19.3 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF53241 - 3.6e-10 38.9 1.0 0.00019 21.1 0.2 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF53241 - 6.3e-07 29.8 0.4 1.6e-06 28.5 0.4 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF53241 - 6.5e-07 28.6 0.6 0.004 16.6 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF53241 - 0.0044 16.8 1.0 1.6 8.7 0.2 2.4 2 0 0 2 2 2 2 EF-hand domain pair FNIP_C PF14638.6 ORF53241 - 0.053 13.1 1.0 0.073 12.7 1.0 1.1 1 0 0 1 1 1 0 Folliculin-interacting protein C-terminus EF-hand_10 PF14788.6 ORF53241 - 0.11 12.4 0.2 1.3 8.9 0.0 2.3 2 1 0 2 2 2 0 EF hand JmjC PF02373.22 ORF53134 - 1.8e-28 99.3 0.0 2.9e-28 98.6 0.0 1.3 1 0 0 1 1 1 1 JmjC domain, hydroxylase FH2 PF02181.23 ORF50525 - 2.8e-05 23.4 0.0 3.7e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Formin Homology 2 Domain RINGv PF12906.7 ORF50354 - 0.042 14.0 0.6 0.073 13.2 0.6 1.4 1 0 0 1 1 1 0 RING-variant domain FAM163 PF15069.6 ORF50354 - 0.49 10.8 2.4 2.4 8.6 0.1 2.3 1 1 1 2 2 2 0 FAM163 family WD40 PF00400.32 ORF49114 - 1.5e-09 38.3 0.4 0.11 13.5 0.0 3.4 3 0 0 3 3 3 3 WD domain, G-beta repeat Nucleoporin_N PF08801.11 ORF49114 - 0.00016 20.5 0.2 0.45 9.2 0.1 2.8 2 1 1 3 3 3 2 Nup133 N terminal like Rota_NS35 PF02509.14 ORF49114 - 0.012 14.6 0.0 0.015 14.3 0.0 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 35 DAGAT PF03982.13 ORF48238 - 0.055 12.4 0.0 0.07 12.0 0.0 1.2 1 0 0 1 1 1 0 Diacylglycerol acyltransferase XK-related PF09815.9 ORF47620 - 0.055 12.5 1.6 0.064 12.3 1.6 1.2 1 0 0 1 1 1 0 XK-related protein EF-hand_6 PF13405.6 ORF45033 - 5.6e-15 53.9 4.1 9.4e-06 25.2 0.1 4.4 3 1 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF45033 - 6e-15 53.6 7.5 0.00046 19.5 0.1 4.5 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF45033 - 6.6e-15 55.3 1.1 1.1e-07 32.2 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF45033 - 1.5e-07 31.2 5.3 0.0025 17.6 0.6 3.3 1 1 3 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF45033 - 6.5e-06 25.4 4.6 0.012 15.1 0.1 4.0 4 0 0 4 4 4 2 EF hand EF-hand_9 PF14658.6 ORF45033 - 0.00064 20.0 0.0 1.7 9.0 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF45033 - 0.074 13.1 0.0 0.93 9.6 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) EF-hand_14 PF17959.1 ORF45033 - 0.1 13.0 0.1 7.3 7.0 0.0 2.2 1 1 1 2 2 2 0 EF-hand domain SRP54 PF00448.22 ORF44366 - 7.2e-64 215.0 1.1 8e-64 214.9 1.1 1.0 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain Pkinase PF00069.25 ORF44312 - 1.9e-06 27.5 1.1 2.4e-06 27.1 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44312 - 0.0098 15.2 0.1 0.017 14.4 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 ORF44312 - 0.067 13.4 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 ABC1 family Imm7 PF15585.6 ORF44312 - 0.097 13.0 0.3 0.14 12.4 0.3 1.2 1 0 0 1 1 1 0 Immunity protein 7 Lipase_GDSL_2 PF13472.6 ORF43414 - 0.00064 20.2 0.0 0.00083 19.8 0.0 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family bZIP_1 PF00170.21 ORF42318 - 0.00074 19.6 14.8 0.0034 17.4 11.0 2.4 1 1 1 2 2 2 2 bZIP transcription factor DUF2959 PF11172.8 ORF42318 - 0.0009 19.4 6.1 0.0014 18.9 6.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2959) ZapB PF06005.12 ORF42318 - 0.028 14.9 7.7 0.06 13.8 7.7 1.6 1 0 0 1 1 1 0 Cell division protein ZapB OmpH PF03938.14 ORF42318 - 0.03 14.7 6.5 0.04 14.3 6.5 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TMF_TATA_bd PF12325.8 ORF42318 - 0.036 14.3 8.0 0.077 13.2 8.0 1.6 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding bZIP_2 PF07716.15 ORF42318 - 0.059 13.5 17.1 0.31 11.2 8.4 2.3 2 0 0 2 2 2 0 Basic region leucine zipper FapA PF03961.13 ORF42318 - 0.069 11.7 4.1 0.079 11.6 4.1 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A UPF0242 PF06785.11 ORF42318 - 0.16 12.0 8.3 0.22 11.6 8.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus KxDL PF10241.9 ORF42318 - 0.17 12.2 7.9 0.31 11.3 7.9 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein YabA PF06156.13 ORF42318 - 0.24 12.1 5.6 0.51 11.0 5.6 1.6 1 0 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF42318 - 0.24 9.3 5.1 0.25 9.2 5.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Ax_dynein_light PF10211.9 ORF42318 - 0.58 10.1 10.8 0.96 9.4 10.8 1.3 1 0 0 1 1 1 0 Axonemal dynein light chain bZIP_Maf PF03131.17 ORF42318 - 0.68 10.5 9.6 0.71 10.4 7.2 2.0 1 1 1 2 2 2 0 bZIP Maf transcription factor DivIC PF04977.15 ORF42318 - 3.7 7.4 10.3 2.3 8.0 6.9 1.9 1 1 0 1 1 1 0 Septum formation initiator CRAL_TRIO_N PF03765.15 ORF42121 - 0.024 14.8 2.1 5.7 7.2 0.0 3.1 3 0 0 3 3 3 0 CRAL/TRIO, N-terminal domain Elongin_A PF06881.11 ORF42121 - 0.19 12.2 6.6 0.35 11.4 6.6 1.5 1 0 0 1 1 1 0 RNA polymerase II transcription factor SIII (Elongin) subunit A Abhydrolase_1 PF00561.20 ORF41646 - 0.0023 17.6 0.2 0.0033 17.1 0.2 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Sec66 PF09802.9 ORF41604 - 0.0056 16.3 0.2 0.0081 15.8 0.2 1.2 1 0 0 1 1 1 1 Preprotein translocase subunit Sec66 SDA1 PF05285.12 ORF40809 - 0.26 10.6 15.8 0.37 10.2 15.8 1.2 1 0 0 1 1 1 0 SDA1 Presenilin PF01080.17 ORF40809 - 0.38 9.5 11.9 0.48 9.1 11.9 1.2 1 0 0 1 1 1 0 Presenilin Raftlin PF15250.6 ORF40809 - 3 6.5 8.7 3.3 6.3 8.7 1.1 1 0 0 1 1 1 0 Raftlin PnpCD_PnpD_N PF18191.1 ORF40784 - 0.12 11.9 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Hydroquinone 1,2-dioxygenase large subunit N-terminal HTH_28 PF13518.6 ORF4053 - 7.2e-24 83.7 0.1 2.5e-11 43.5 0.1 2.2 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_23 PF13384.6 ORF4053 - 1.2e-08 34.5 0.5 0.0016 18.2 0.1 2.9 2 1 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 ORF4053 - 6e-08 32.6 2.4 0.0072 16.3 0.0 2.8 3 0 0 3 3 3 2 Winged helix-turn helix HTH_Tnp_1 PF01527.20 ORF4053 - 1.9e-07 31.3 1.0 0.0016 18.7 0.1 2.6 1 1 1 2 2 2 2 Transposase BrkDBD PF09607.10 ORF4053 - 7.1e-06 25.7 0.0 1.6e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 Brinker DNA-binding domain DUF1153 PF06627.11 ORF4053 - 7.8e-05 22.7 0.1 0.051 13.7 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1153) HTH_32 PF13565.6 ORF4053 - 0.0041 17.7 6.9 0.13 12.9 2.5 2.9 2 2 0 2 2 2 1 Homeodomain-like domain CENP-B_N PF04218.13 ORF4053 - 0.0069 16.0 0.0 0.031 13.9 0.0 2.0 2 0 0 2 2 2 1 CENP-B N-terminal DNA-binding domain SCAB-ABD PF16711.5 ORF4053 - 0.016 15.0 0.0 0.05 13.5 0.0 1.8 2 0 0 2 2 2 0 Actin-binding domain of plant-specific actin-binding protein P22_Cro PF14549.6 ORF4053 - 0.051 13.4 0.1 0.099 12.5 0.1 1.5 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro Phage_CII PF05269.11 ORF4053 - 0.092 13.0 0.2 0.36 11.1 0.0 1.9 2 0 0 2 2 2 0 Bacteriophage CII protein Trp_oprn_chp PF09534.10 ORF35866 - 0.0043 16.9 2.3 0.0068 16.2 2.3 1.3 1 0 0 1 1 1 1 Tryptophan-associated transmembrane protein (Trp_oprn_chp) MadM PF03818.13 ORF35866 - 0.24 11.3 3.3 0.48 10.3 3.3 1.4 1 0 0 1 1 1 0 Malonate/sodium symporter MadM subunit DnaJ PF00226.31 ORF35195 - 7.9e-26 90.0 3.3 1.1e-25 89.5 3.3 1.2 1 0 0 1 1 1 1 DnaJ domain DnaJ_C PF01556.18 ORF35195 - 0.082 13.0 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 DnaJ C terminal domain DUF3810 PF12725.7 ORF35195 - 0.091 12.1 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) RNase_H2-Ydr279 PF09468.10 ORF35179 - 0.029 14.6 0.6 0.041 14.1 0.6 1.1 1 0 0 1 1 1 0 Ydr279p protein family (RNase H2 complex component) wHTH domain Nrf1_activ_bdg PF10492.9 ORF35179 - 0.042 14.5 0.2 0.062 14.0 0.2 1.3 1 0 0 1 1 1 0 Nrf1 activator activation site binding domain ABC_tran PF00005.27 ORF33509 - 7.1e-10 39.5 0.1 1.8e-09 38.3 0.0 1.7 2 1 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF33509 - 8.5e-08 32.4 0.0 1.4e-07 31.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 ORF33509 - 0.0012 19.6 0.2 0.004 17.9 0.1 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4162) RNA_pol_Rpb1_1 PF04997.12 ORF33509 - 0.051 12.9 0.0 0.054 12.8 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 1 DAGK_cat PF00781.24 ORF33357 - 0.056 13.1 0.0 0.089 12.4 0.0 1.4 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain WDCP PF15390.6 ORF33357 - 0.084 11.2 0.0 0.097 11.0 0.0 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family CRM1_repeat PF18777.1 ORF33163 - 0.055 13.0 1.1 0.065 12.8 0.1 1.7 2 0 0 2 2 2 0 Chromosome region maintenance or exportin repeat S_layer_N PF05123.12 ORF32904 - 0.022 14.6 0.5 0.026 14.4 0.5 1.1 1 0 0 1 1 1 0 S-layer like family, N-terminal region zf-RING_2 PF13639.6 ORF32801 - 4.1e-13 49.4 6.4 4.1e-13 49.4 6.4 1.6 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF32801 - 8e-09 35.7 3.6 8e-09 35.7 3.6 1.7 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF32801 - 1.6e-08 34.5 0.8 4.5e-08 33.0 0.7 1.8 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF32801 - 2.9e-08 33.3 4.0 6e-08 32.3 4.0 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF32801 - 2.6e-07 30.4 5.5 5.3e-07 29.4 5.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF32801 - 2.9e-07 30.2 4.8 5.3e-07 29.4 4.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF32801 - 3e-07 30.4 1.3 5e-07 29.7 1.3 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF32801 - 4.7e-07 29.7 4.4 8e-07 28.9 4.4 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF32801 - 1.2e-06 28.3 4.6 2.1e-06 27.5 4.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF32801 - 9.2e-05 22.2 5.4 0.00016 21.4 5.4 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF32801 - 0.0012 18.5 5.0 0.0027 17.3 5.0 1.6 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF32801 - 0.0012 18.7 11.9 0.0027 17.6 4.3 2.5 3 0 0 3 3 2 1 Prokaryotic RING finger family 1 zf-RING_4 PF14570.6 ORF32801 - 0.0042 16.8 6.4 0.0042 16.8 6.4 1.6 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain Rtf2 PF04641.12 ORF32801 - 0.0044 16.4 0.2 0.0057 16.1 0.2 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-C3HC4_4 PF15227.6 ORF32801 - 0.0095 16.1 5.8 0.034 14.3 5.9 1.9 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF32801 - 0.023 14.7 0.2 0.042 13.8 0.2 1.4 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Vps39_2 PF10367.9 ORF32801 - 0.044 14.2 0.4 0.044 14.2 0.4 2.2 3 0 0 3 3 2 0 Vacuolar sorting protein 39 domain 2 U-box PF04564.15 ORF32801 - 0.14 12.4 0.0 0.36 11.1 0.0 1.6 2 0 0 2 2 2 0 U-box domain TMEM132D_C PF15706.5 ORF32801 - 0.14 11.9 0.2 0.23 11.2 0.2 1.3 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term zf-Nse PF11789.8 ORF32801 - 0.23 11.3 2.2 0.42 10.5 2.2 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit RINGv PF12906.7 ORF32801 - 0.6 10.3 10.1 0.84 9.8 6.9 2.5 2 1 0 2 2 2 0 RING-variant domain Ifi-6-16 PF06140.13 ORF32175 - 1.5e-12 47.3 26.6 1.5e-12 47.3 26.6 1.8 2 0 0 2 2 2 1 Interferon-induced 6-16 family HHH_5 PF14520.6 ORF32175 - 0.023 15.3 1.6 0.023 15.3 1.6 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain RRM_1 PF00076.22 ORF31957 - 9.6e-18 63.8 0.0 1.4e-17 63.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF31957 - 0.0071 16.2 0.0 0.018 14.9 0.0 1.6 1 1 0 1 1 1 1 Occluded RNA-recognition motif CDC45 PF02724.14 ORF31957 - 3.1 6.0 17.9 3.6 5.8 17.9 1.0 1 0 0 1 1 1 0 CDC45-like protein CAP PF00188.26 ORF30916 - 9e-10 39.5 0.0 1.1e-09 39.2 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family FAA_hydrolase PF01557.18 ORF29814 - 2.1e-47 161.6 0.0 2.5e-47 161.4 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family He_PIG PF05345.12 ORF29166 - 0.00024 21.2 3.3 0.00024 21.2 3.3 2.2 2 1 0 2 2 2 1 Putative Ig domain Ig_C17orf99 PF17736.1 ORF29166 - 0.016 15.2 0.1 0.031 14.3 0.1 1.5 1 0 0 1 1 1 0 C17orf99 Ig domain DUF2782 PF11191.8 ORF29163 - 0.12 12.6 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2782) zf-C2H2 PF00096.26 ORF27081 - 0.0017 18.7 1.4 0.0017 18.7 1.4 3.0 4 0 0 4 4 4 1 Zinc finger, C2H2 type zf-C3HC4_2 PF13923.6 ORF27081 - 0.093 12.6 2.8 1.3 8.9 0.2 3.1 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) zf-C2H2_4 PF13894.6 ORF27081 - 0.13 13.2 2.8 0.22 12.5 0.8 2.5 3 0 0 3 3 3 0 C2H2-type zinc finger OmpA PF00691.20 ORF27020 - 2.5e-22 79.1 0.0 4e-22 78.4 0.0 1.3 1 0 0 1 1 1 1 OmpA family S_layer_N PF05123.12 ORF26258 - 0.022 14.6 0.5 0.026 14.4 0.5 1.1 1 0 0 1 1 1 0 S-layer like family, N-terminal region Pkinase PF00069.25 ORF25864 - 1.9e-06 27.5 1.1 2.4e-06 27.1 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF25864 - 0.0098 15.2 0.1 0.017 14.4 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 ORF25864 - 0.067 13.4 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 ABC1 family Imm7 PF15585.6 ORF25864 - 0.097 13.0 0.3 0.14 12.4 0.3 1.2 1 0 0 1 1 1 0 Immunity protein 7 SRP-alpha_N PF04086.13 ORF25761 - 5.7 6.8 48.7 6.9 6.5 48.7 1.2 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal PI31_Prot_N PF11566.8 ORF25407 - 0.066 13.0 3.1 0.085 12.7 3.1 1.3 1 1 0 1 1 1 0 PI31 proteasome regulator N-terminal BAAT_C PF08840.11 ORF2373 - 0.098 12.6 0.3 0.16 11.9 0.3 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal KIAA1430 PF13879.6 ORF2373 - 1.9 9.3 10.6 12 6.8 5.7 2.3 1 1 1 2 2 2 0 KIAA1430 homologue DUF3278 PF11683.8 ORF22124 - 1.6e-05 25.0 3.1 0.015 15.4 0.0 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF3278) PRA1 PF03208.19 ORF22124 - 0.046 13.4 3.1 0.065 12.8 3.1 1.2 1 0 0 1 1 1 0 PRA1 family protein DWNN PF08783.11 ORF22124 - 0.22 11.8 1.0 12 6.3 0.1 2.9 3 0 0 3 3 3 0 DWNN domain Pkinase PF00069.25 ORF21926 - 1.9e-06 27.5 1.1 2.4e-06 27.1 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF21926 - 0.0098 15.2 0.1 0.017 14.4 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 ORF21926 - 0.067 13.4 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 ABC1 family Imm7 PF15585.6 ORF21926 - 0.097 13.0 0.3 0.14 12.4 0.3 1.2 1 0 0 1 1 1 0 Immunity protein 7 BRX PF08381.11 ORF2135 - 0.043 13.2 0.8 0.32 10.4 0.1 2.3 2 0 0 2 2 2 0 Transcription factor regulating root and shoot growth via Pin3 MORN PF02493.20 ORF20890 - 5.7e-34 114.0 36.4 4.3e-09 35.7 1.2 6.0 6 0 0 6 6 6 5 MORN repeat Tudor_2 PF18104.1 ORF20890 - 0.00044 19.9 9.8 0.76 9.5 0.2 4.6 4 0 0 4 4 4 2 Jumonji domain-containing protein 2A Tudor domain BAAT_C PF08840.11 ORF20648 - 0.098 12.6 0.3 0.16 11.9 0.3 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal KIAA1430 PF13879.6 ORF20648 - 1.9 9.3 10.6 12 6.8 5.7 2.3 1 1 1 2 2 2 0 KIAA1430 homologue IQ PF00612.27 ORF19689 - 0.0072 16.0 3.2 0.0097 15.6 0.9 2.2 2 0 0 2 2 2 1 IQ calmodulin-binding motif HAD_2 PF13419.6 ORF19689 - 0.62 10.1 4.5 0.16 12.0 1.5 1.6 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Cnd1 PF12717.7 ORF19517 - 0.018 15.1 0.2 6.5 6.8 0.0 2.1 2 0 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 DUF577 PF04510.12 ORF19517 - 0.062 13.2 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF577) Nipped-B_C PF12830.7 ORF19517 - 0.13 12.2 0.0 0.27 11.2 0.0 1.6 1 1 0 1 1 1 0 Sister chromatid cohesion C-terminus adh_short_C2 PF13561.6 ORF18220 - 7.9e-11 41.9 0.0 1.1e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase RecR PF02132.15 ORF16115 - 0.019 14.5 1.3 0.1 12.2 0.1 2.4 2 0 0 2 2 2 0 RecR protein NTPase_I-T PF01931.18 ORF16115 - 0.21 11.4 0.0 0.31 10.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF84 OTU PF02338.19 ORF16066 - 1.8e-08 34.9 0.4 3e-08 34.2 0.0 1.5 2 0 0 2 2 2 1 OTU-like cysteine protease ANAPC4_WD40 PF12894.7 ORF15615 - 5.2e-09 36.3 0.3 0.00085 19.6 0.0 3.3 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF15615 - 7.3e-09 36.1 0.3 4.3e-07 30.5 0.0 3.2 3 1 0 3 3 3 1 WD domain, G-beta repeat Coatomer_WDAD PF04053.14 ORF15615 - 0.035 13.1 0.0 2.9 6.8 0.0 2.1 1 1 1 2 2 2 0 Coatomer WD associated region Mersacidin PF16934.5 ORF15615 - 0.16 11.8 2.6 0.49 10.2 0.0 2.5 2 1 0 2 2 2 0 Two-component Enterococcus faecalis cytolysin (EFC) Arrestin_N PF00339.29 ORF15355 - 3.4e-15 56.4 0.1 4.2e-15 56.1 0.1 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 ORF15355 - 0.00056 19.7 0.0 0.0017 18.1 0.0 1.7 2 0 0 2 2 2 1 Arrestin_N terminal like Arrestin_C PF02752.22 ORF15355 - 0.00091 19.7 0.0 0.0012 19.2 0.0 1.2 1 0 0 1 1 1 1 Arrestin (or S-antigen), C-terminal domain DUF5040 PF16443.5 ORF14948 - 0.13 11.6 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5040) NodA PF02474.15 ORF14913 - 0.17 11.6 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein A (NodA) ABG_transport PF03806.13 ORF14670 - 9.1e-72 241.9 17.9 1e-71 241.7 17.9 1.0 1 0 0 1 1 1 1 AbgT putative transporter family Na_sulph_symp PF00939.19 ORF14670 - 0.0072 15.4 11.3 0.009 15.1 11.3 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region DcuC PF03606.15 ORF14670 - 0.06 11.8 11.6 0.015 13.8 8.6 1.5 1 1 0 1 1 1 0 C4-dicarboxylate anaerobic carrier Pro_isomerase PF00160.21 ORF12422 - 1e-49 168.8 0.0 1.3e-49 168.5 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sigma70_r4_2 PF08281.12 ORF12057 - 3.3e-15 55.5 0.4 6.7e-15 54.5 0.0 1.7 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 ORF12057 - 3e-12 46.1 0.2 4.9e-12 45.4 0.2 1.3 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 ORF12057 - 2e-08 33.6 0.0 4.2e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 ORF12057 - 5.3e-05 23.2 0.1 0.00012 22.0 0.1 1.5 1 1 0 1 1 1 1 ECF sigma factor HTH_24 PF13412.6 ORF12057 - 0.0004 19.9 0.0 0.00077 19.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 ORF12057 - 0.00044 20.0 0.0 0.0011 18.7 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain PCI PF01399.27 ORF12057 - 0.0036 17.8 0.0 0.0065 17.0 0.0 1.4 1 0 0 1 1 1 1 PCI domain GerE PF00196.19 ORF12057 - 0.0078 15.7 0.0 0.019 14.5 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_11 PF08279.12 ORF12057 - 0.014 15.3 0.0 0.029 14.3 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_36 PF13730.6 ORF12057 - 0.019 14.9 0.0 0.04 13.9 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_40 PF14493.6 ORF12057 - 0.025 15.0 0.0 0.062 13.8 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain TnsD PF15978.5 ORF12057 - 0.025 13.6 0.1 0.044 12.8 0.0 1.4 2 0 0 2 2 2 0 Tn7-like transposition protein D MarR_2 PF12802.7 ORF12057 - 0.035 14.0 0.0 0.081 12.8 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 ORF12057 - 0.056 13.6 0.0 0.13 12.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 ORF12057 - 0.075 13.1 0.1 0.2 11.7 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_Mga PF08280.11 ORF12057 - 0.083 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_IclR PF09339.10 ORF12057 - 0.11 12.3 0.1 0.26 11.1 0.0 1.8 2 0 0 2 2 1 0 IclR helix-turn-helix domain HTH_9 PF08221.11 ORF12057 - 0.11 12.6 0.1 3.6 7.8 0.0 2.3 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_10 PF04967.12 ORF12057 - 0.12 12.2 0.0 0.29 11.0 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain NTPase_I-T PF01931.18 ORF112543 - 1.8e-52 177.4 0.0 2.1e-52 177.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF84 BAAT_C PF08840.11 ORF107679 - 0.098 12.6 0.3 0.16 11.9 0.3 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal KIAA1430 PF13879.6 ORF107679 - 1.9 9.3 10.6 12 6.8 5.7 2.3 1 1 1 2 2 2 0 KIAA1430 homologue CAP PF00188.26 ORF105984 - 9e-10 39.5 0.0 1.1e-09 39.2 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DUF2838 PF10998.8 ORF104 - 1.3e-06 28.6 14.9 1.8e-06 28.1 14.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) MORN PF02493.20 ORF103251 - 6.8e-33 110.6 62.1 9.5e-09 34.7 3.3 7.3 8 0 0 8 8 8 6 MORN repeat DUF448 PF04296.13 ORF103251 - 0.11 12.4 7.4 1.9 8.4 0.2 4.0 3 1 1 4 4 4 0 Protein of unknown function (DUF448) DUF3048_C PF17479.2 ORF103251 - 1.6 9.2 19.8 0.55 10.6 1.3 3.8 1 1 3 4 4 4 0 Protein of unknown function (DUF3048) C-terminal domain DUF3099 PF11298.8 ORF102562 - 0.16 12.1 0.1 0.35 11.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) Asp-Al_Ex PF06826.12 NODE_40356_length_514_cov_2.784969_g32885_i0forward_frame_1 - 2.3e-38 131.6 10.6 2.6e-38 131.5 10.6 1.0 1 0 0 1 1 1 1 Predicted Permease Membrane Region DUF819 PF05684.12 NODE_40356_length_514_cov_2.784969_g32885_i0forward_frame_1 - 0.0013 17.9 3.3 0.0013 17.9 3.3 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF819) PsbT PF01405.17 NODE_40356_length_514_cov_2.784969_g32885_i0forward_frame_1 - 3.6 7.5 6.3 0.8 9.6 1.0 2.7 2 0 0 2 2 2 0 Photosystem II reaction centre T protein Kelch_3 PF13415.6 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 1.1e-18 67.0 1.7 9e-07 29.0 0.0 3.1 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 1.4e-15 56.8 4.7 9.4e-05 22.3 0.0 4.1 4 0 0 4 4 4 3 Kelch motif Kelch_4 PF13418.6 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 1.5e-11 44.1 3.3 0.013 15.5 0.1 3.3 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 1.5e-09 37.8 0.8 0.0012 19.1 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_1 PF01344.25 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 2.3e-06 27.1 0.1 0.046 13.3 0.0 3.6 4 0 0 4 4 4 2 Kelch motif RAG2 PF03089.14 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 0.0012 17.9 0.0 0.04 12.9 0.0 2.1 1 1 1 2 2 2 2 Recombination activating protein 2 Kelch_2 PF07646.15 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 0.0027 17.6 5.6 0.29 11.2 0.1 3.8 3 1 0 3 3 3 2 Kelch motif Endonuc_subdom PF09062.10 NODE_40347_length_514_cov_16.033403_g32877_i0reverse_frame_1 - 0.07 14.0 1.9 0.16 12.8 1.0 2.0 2 0 0 2 2 2 0 PI-PfuI Endonuclease subdomain PC_rep PF01851.22 NODE_40344_length_514_cov_31.116910_g32874_i0forward_frame_1 - 1.2e-06 28.7 0.4 0.24 11.9 0.0 3.5 3 0 0 3 3 3 2 Proteasome/cyclosome repeat FNIP PF05725.12 NODE_40308_length_514_cov_358.567850_g32839_i0reverse_frame_1 - 1.9e-24 85.5 13.2 2.7e-12 46.6 2.7 2.2 2 0 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_40308_length_514_cov_358.567850_g32839_i0reverse_frame_1 - 0.00036 20.5 0.3 0.00051 20.0 0.3 1.2 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) DUF4619 PF15398.6 NODE_40294_length_515_cov_2.214583_g32827_i0reverse_frame_1 - 0.015 14.8 0.1 0.021 14.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4619) HNF_C PF09354.10 NODE_40294_length_515_cov_2.214583_g32827_i0reverse_frame_1 - 0.081 14.0 2.6 0.14 13.2 2.4 1.5 1 1 0 1 1 1 0 HNF3 C-terminal domain CrgA PF06781.12 NODE_40294_length_515_cov_2.214583_g32827_i0forward_frame_1 - 0.87 9.7 3.8 1.9 8.6 3.8 1.6 1 1 0 1 1 1 0 Cell division protein CrgA PBP_sp32 PF07222.12 NODE_40292_length_515_cov_2.537500_g32825_i0reverse_frame_1 - 0.071 12.6 0.3 0.09 12.2 0.3 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 MORN PF02493.20 NODE_40292_length_515_cov_2.537500_g32825_i0reverse_frame_1 - 0.52 10.3 0.1 0.52 10.3 0.1 3.0 3 0 0 3 3 3 0 MORN repeat Metallophos PF00149.28 NODE_40282_length_515_cov_61.370833_g32815_i0reverse_frame_1 - 0.0075 16.8 0.0 0.016 15.7 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF1904 PF08921.11 NODE_40276_length_515_cov_78.285417_g32809_i0forward_frame_1 - 0.082 13.2 1.3 0.46 10.8 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1904) Pinin_SDK_N PF04697.13 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_1 - 1.7 9.3 8.5 2.5 8.8 6.7 1.9 2 0 0 2 2 2 0 pinin/SDK conserved region RAP1 PF07218.11 NODE_40265_length_515_cov_113.095833_g32798_i0reverse_frame_1 - 2.3 6.4 4.1 2.5 6.3 4.1 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Methyltransf_21 PF05050.12 NODE_40265_length_515_cov_113.095833_g32798_i0forward_frame_1 - 0.0033 17.5 0.0 0.0037 17.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase FkbM domain E1_UFD PF09358.10 NODE_40263_length_515_cov_120.237500_g32796_i0reverse_frame_1 - 0.042 14.6 0.1 0.042 14.6 0.1 2.0 2 1 0 2 2 2 0 Ubiquitin fold domain PHD PF00628.29 NODE_40263_length_515_cov_120.237500_g32796_i0reverse_frame_1 - 0.18 11.7 0.5 0.18 11.7 0.5 1.8 2 0 0 2 2 2 0 PHD-finger PHD_2 PF13831.6 NODE_40263_length_515_cov_120.237500_g32796_i0reverse_frame_1 - 0.31 10.7 2.1 0.65 9.6 2.1 1.5 1 0 0 1 1 1 0 PHD-finger Tai4 PF16695.5 NODE_40263_length_515_cov_120.237500_g32796_i0reverse_frame_1 - 0.38 11.3 3.9 7.4 7.2 1.2 2.9 2 1 0 2 2 2 0 Type VI secretion system (T6SS), amidase immunity protein Methyltransf_16 PF10294.9 NODE_40259_length_515_cov_141.670833_g32792_i0forward_frame_1 - 2.3e-08 34.0 0.0 3e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase Pcc1 PF09341.10 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 0.051 13.7 0.0 0.08 13.1 0.0 1.3 1 0 0 1 1 1 0 Transcription factor Pcc1 Herpes_UL6 PF01763.16 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 0.13 10.8 12.9 0.15 10.6 12.9 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like AAA_11 PF13086.6 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 0.47 10.2 11.4 0.57 9.9 11.4 1.1 1 0 0 1 1 1 0 AAA domain SLIDE PF09111.10 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 1.2 9.2 17.6 0.16 12.0 12.0 2.1 1 1 2 3 3 3 0 SLIDE Exonuc_VII_L PF02601.15 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 4.3 6.8 11.5 5.3 6.5 11.5 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit PHD_2 PF13831.6 NODE_40243_length_515_cov_354.806250_g32777_i0reverse_frame_1 - 0.011 15.2 3.3 0.032 13.8 3.3 1.8 1 0 0 1 1 1 0 PHD-finger PHD PF00628.29 NODE_40243_length_515_cov_354.806250_g32777_i0reverse_frame_1 - 0.016 15.1 6.0 0.016 15.1 6.0 1.9 2 1 0 2 2 2 0 PHD-finger zf-B_box PF00643.24 NODE_40243_length_515_cov_354.806250_g32777_i0reverse_frame_1 - 0.02 15.0 10.0 0.02 15.0 10.0 2.3 3 0 0 3 3 3 0 B-box zinc finger E1_UFD PF09358.10 NODE_40243_length_515_cov_354.806250_g32777_i0reverse_frame_1 - 0.029 15.0 0.2 0.06 14.0 0.2 1.5 1 0 0 1 1 1 0 Ubiquitin fold domain Proton_antipo_C PF01010.19 NODE_40240_length_515_cov_1190.654167_g32774_i0forward_frame_1 - 0.0082 15.8 1.1 0.014 15.1 1.1 1.3 1 0 0 1 1 1 1 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus RE_HindVP PF09519.10 NODE_40222_length_516_cov_3.646570_g32757_i0reverse_frame_1 - 0.013 14.6 0.6 0.019 14.0 0.6 1.2 1 0 0 1 1 1 0 HindVP restriction endonuclease T5orf172 PF10544.9 NODE_40219_length_516_cov_51.719335_g32754_i0reverse_frame_1 - 0.04 14.5 0.1 0.066 13.8 0.1 1.4 1 0 0 1 1 1 0 T5orf172 domain DUF316 PF03761.15 NODE_40211_length_516_cov_91.918919_g32746_i0reverse_frame_1 - 0.011 15.3 0.0 0.015 14.9 0.0 1.1 1 0 0 1 1 1 0 Chymotrypsin family Peptidase-S1 MerB PF03243.15 NODE_40211_length_516_cov_91.918919_g32746_i0forward_frame_1 - 0.038 14.1 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 Alkylmercury lyase DUF4357 PF14267.6 NODE_40200_length_516_cov_161.185031_g32737_i0forward_frame_1 - 0.14 12.2 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4357) PPR_3 PF13812.6 NODE_40197_length_516_cov_168.781705_g32734_i0reverse_frame_1 - 6.4e-11 42.2 0.0 2.1e-05 24.5 0.0 2.3 1 1 2 3 3 3 3 Pentatricopeptide repeat domain PPR PF01535.20 NODE_40197_length_516_cov_168.781705_g32734_i0reverse_frame_1 - 4.1e-09 36.1 0.1 0.028 14.7 0.0 4.1 4 0 0 4 4 4 2 PPR repeat PPR_2 PF13041.6 NODE_40197_length_516_cov_168.781705_g32734_i0reverse_frame_1 - 6e-08 32.8 0.0 0.0028 17.8 0.0 3.3 1 1 3 4 4 4 3 PPR repeat family TPR_7 PF13176.6 NODE_40197_length_516_cov_168.781705_g32734_i0reverse_frame_1 - 0.019 15.0 0.9 0.49 10.5 0.2 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat Clathrin PF00637.20 NODE_40197_length_516_cov_168.781705_g32734_i0reverse_frame_1 - 0.025 14.4 0.2 6.2 6.7 0.0 2.8 2 1 1 3 3 3 0 Region in Clathrin and VPS RebB PF11747.8 NODE_40197_length_516_cov_168.781705_g32734_i0reverse_frame_1 - 0.44 10.7 3.0 0.52 10.4 0.1 2.4 3 0 0 3 3 3 0 Killing trait DUF982 PF06169.12 NODE_40197_length_516_cov_168.781705_g32734_i0reverse_frame_1 - 5.1 7.2 7.8 16 5.6 0.3 3.3 2 2 2 4 4 4 0 Protein of unknown function (DUF982) Pkinase PF00069.25 NODE_40190_length_516_cov_359.060291_g32727_i0reverse_frame_1 - 0.00032 20.1 0.0 0.00046 19.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 NODE_40190_length_516_cov_359.060291_g32727_i0reverse_frame_1 - 0.00047 20.2 0.1 0.0023 17.9 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family Bac_small_YrzI PF09501.10 NODE_40188_length_516_cov_374.018711_g32725_i0reverse_frame_1 - 0.066 13.4 0.3 0.13 12.4 0.3 1.5 1 0 0 1 1 1 0 Probable sporulation protein (Bac_small_yrzI) IMUP PF15761.5 NODE_40187_length_516_cov_416.178794_g32724_i0reverse_frame_1 - 0.18 12.5 7.9 0.31 11.7 7.9 1.4 1 0 0 1 1 1 0 Immortalisation up-regulated protein Transformer PF06495.11 NODE_40187_length_516_cov_416.178794_g32724_i0reverse_frame_1 - 2 8.5 24.0 3.1 7.9 24.0 1.3 1 0 0 1 1 1 0 Fruit fly transformer protein Hepatitis_core PF00906.20 NODE_40187_length_516_cov_416.178794_g32724_i0reverse_frame_1 - 3.1 7.3 13.0 3.8 7.0 13.0 1.2 1 0 0 1 1 1 0 Hepatitis core antigen Med3 PF11593.8 NODE_40187_length_516_cov_416.178794_g32724_i0forward_frame_1 - 9.7 5.3 9.0 12 4.9 9.0 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Ammonium_transp PF00909.21 NODE_40183_length_516_cov_5414.189189_g32721_i0reverse_frame_1 - 6.5e-07 28.4 0.0 1.1e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Ammonium Transporter Family Dynein_heavy PF03028.15 NODE_40180_length_517_cov_1.881743_g32719_i0forward_frame_3 - 0.052 13.6 0.1 0.13 12.3 0.1 1.8 2 0 0 2 2 2 0 Dynein heavy chain region D6 P-loop domain Abhydrolase_2 PF02230.16 NODE_40178_length_517_cov_2.338174_g32717_i0forward_frame_2 - 1.6e-21 77.2 0.0 1.9e-21 76.9 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase TrkA_TMD PF18613.1 NODE_40177_length_517_cov_2.406639_g32716_i0forward_frame_3 - 0.19 11.2 2.1 0.43 10.1 2.1 1.6 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain Iso_dh PF00180.20 NODE_40176_length_517_cov_2.452282_g32715_i0forward_frame_2 - 4.2e-32 111.7 0.0 4.9e-32 111.4 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Enterotoxin_b PF01376.18 NODE_40172_length_517_cov_2.790456_g32711_i0forward_frame_2 - 0.032 14.4 0.0 0.054 13.7 0.0 1.3 1 0 0 1 1 1 0 Heat-labile enterotoxin beta chain TPR_1 PF00515.28 NODE_40165_length_517_cov_52.892116_g32704_i0forward_frame_3 - 0.0011 18.7 0.4 0.0023 17.7 0.4 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_40165_length_517_cov_52.892116_g32704_i0forward_frame_3 - 0.008 16.2 0.1 0.016 15.3 0.1 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat MIT PF04212.18 NODE_40165_length_517_cov_52.892116_g32704_i0forward_frame_3 - 0.038 14.1 0.4 0.078 13.1 0.4 1.5 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain TPR_7 PF13176.6 NODE_40165_length_517_cov_52.892116_g32704_i0forward_frame_3 - 0.13 12.3 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat ATG16 PF08614.11 NODE_40163_length_517_cov_72.626556_g32702_i0reverse_frame_2 - 0.00075 19.8 6.9 0.0012 19.1 6.9 1.4 1 1 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF848 PF05852.11 NODE_40163_length_517_cov_72.626556_g32702_i0reverse_frame_2 - 0.24 11.5 5.4 1.1 9.4 0.0 2.2 2 0 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) FlaC_arch PF05377.11 NODE_40163_length_517_cov_72.626556_g32702_i0reverse_frame_2 - 0.68 10.4 7.9 14 6.1 0.0 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Med28 PF11594.8 NODE_40157_length_517_cov_85.890041_g32696_i0forward_frame_3 - 0.021 14.9 0.1 0.034 14.2 0.1 1.3 1 0 0 1 1 1 0 Mediator complex subunit 28 P53 PF00870.18 NODE_40155_length_517_cov_89.587137_g32694_i0reverse_frame_3 - 0.047 13.4 0.5 0.064 13.0 0.5 1.1 1 0 0 1 1 1 0 P53 DNA-binding domain Multi-haem_cyto PF13447.6 NODE_40122_length_518_cov_2.401656_g32665_i0forward_frame_2 - 0.057 12.7 0.5 0.065 12.5 0.5 1.1 1 0 0 1 1 1 0 Seven times multi-haem cytochrome CxxCH PsaX PF08078.12 NODE_40121_length_518_cov_3.031056_g32664_i0forward_frame_3 - 0.19 11.7 2.0 24 5.0 0.1 3.1 3 0 0 3 3 3 0 PsaX family Gly_transf_sug PF04488.15 NODE_40112_length_518_cov_28.716356_g32655_i0forward_frame_2 - 0.018 15.7 0.1 0.027 15.1 0.1 1.4 1 0 0 1 1 1 0 Glycosyltransferase sugar-binding region containing DXD motif RCC1_2 PF13540.6 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 3.1e-11 42.7 8.0 0.096 12.5 0.1 4.2 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Mitofilin PF09731.9 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 0.0022 16.9 0.1 0.0035 16.2 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial inner membrane protein DUF155 PF02582.14 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 0.0047 17.1 0.1 5.6 7.0 0.0 3.3 3 1 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Sec66 PF09802.9 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 0.018 14.6 0.0 2.1 7.9 0.0 2.5 2 1 1 3 3 3 0 Preprotein translocase subunit Sec66 WAK_assoc PF14380.6 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 0.072 13.8 0.1 23 5.8 0.0 3.1 2 2 1 3 3 3 0 Wall-associated receptor kinase C-terminal DUF1282 PF06930.12 NODE_40077_length_519_cov_2.793388_g32623_i0reverse_frame_3 - 1e-07 31.9 0.0 1.3e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1282) Yip1 PF04893.17 NODE_40077_length_519_cov_2.793388_g32623_i0reverse_frame_3 - 0.00038 20.2 0.0 0.00058 19.6 0.0 1.2 1 0 0 1 1 1 1 Yip1 domain Phenol_monoox PF04663.12 NODE_40077_length_519_cov_2.793388_g32623_i0forward_frame_2 - 0.15 12.2 0.2 0.42 10.8 0.0 1.8 2 0 0 2 2 2 0 Phenol hydroxylase conserved region Herpes_BLLF1 PF05109.13 NODE_40070_length_519_cov_11.142562_g32616_i0reverse_frame_3 - 0.51 8.2 11.7 0.65 7.9 11.7 1.0 1 0 0 1 1 1 0 Herpes virus major outer envelope glycoprotein (BLLF1) KASH_CCD PF14662.6 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 6.4e-05 22.9 8.0 8.8e-05 22.4 8.0 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DUF4795 PF16043.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0027 17.3 4.0 0.0033 17.0 4.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) ATG16 PF08614.11 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0037 17.5 3.6 0.0048 17.1 3.6 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) Herpes_UL6 PF01763.16 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0041 15.7 1.1 0.0049 15.4 1.1 1.1 1 0 0 1 1 1 1 Herpesvirus UL6 like BicD PF09730.9 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0043 15.6 4.5 0.0052 15.3 4.5 1.1 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D TMF_TATA_bd PF12325.8 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0061 16.8 5.6 0.0089 16.2 5.6 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding zf-C4H2 PF10146.9 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0073 16.6 3.2 0.01 16.1 3.2 1.3 1 0 0 1 1 1 1 Zinc finger-containing protein BST2 PF16716.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0081 16.7 4.4 0.014 16.0 4.4 1.3 1 0 0 1 1 1 1 Bone marrow stromal antigen 2 Wtap PF17098.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.011 15.6 3.3 0.017 15.1 3.3 1.3 1 0 0 1 1 1 0 WTAP/Mum2p family APG6_N PF17675.1 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.012 16.1 6.9 0.017 15.6 6.9 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region HIP1_clath_bdg PF16515.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.014 15.9 3.0 0.025 15.2 3.0 1.5 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF3552 PF12072.8 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.02 14.3 6.5 0.028 13.8 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Tup_N PF08581.10 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.03 14.6 0.3 0.03 14.6 0.3 2.4 1 1 1 2 2 2 0 Tup N-terminal DUF3450 PF11932.8 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.04 13.2 4.9 0.05 12.9 4.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TolA_bind_tri PF16331.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.058 13.5 4.4 0.1 12.7 4.4 1.5 1 1 0 1 1 1 0 TolA binding protein trimerisation YabA PF06156.13 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.088 13.5 4.3 0.14 12.8 4.3 1.4 1 0 0 1 1 1 0 Initiation control protein YabA DUF2312 PF10073.9 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.093 12.4 6.9 0.077 12.7 2.7 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) JAKMIP_CC3 PF16034.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.12 12.3 8.1 0.37 10.7 8.1 1.8 1 1 0 1 1 1 0 JAKMIP CC3 domain Seryl_tRNA_N PF02403.22 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.14 12.4 10.5 0.16 12.2 8.9 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Fzo_mitofusin PF04799.13 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.14 11.7 4.9 0.21 11.1 4.9 1.2 1 0 0 1 1 1 0 fzo-like conserved region Laminin_II PF06009.12 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.15 12.0 4.9 0.22 11.5 4.9 1.2 1 0 0 1 1 1 0 Laminin Domain II DUF1664 PF07889.12 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.16 12.0 4.8 0.39 10.8 5.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) PhoU PF01895.19 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.2 12.1 3.4 0.52 10.8 3.4 1.7 1 1 0 1 1 1 0 PhoU domain ARS2 PF04959.13 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.25 11.7 6.9 0.41 11.0 6.9 1.3 1 0 0 1 1 1 0 Arsenite-resistance protein 2 ApoO PF09769.9 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.26 11.3 0.8 0.51 10.3 0.3 1.7 1 1 1 2 2 2 0 Apolipoprotein O DUF4446 PF14584.6 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.3 11.0 4.3 0.43 10.6 4.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) TMPIT PF07851.13 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.32 10.2 3.8 0.39 9.9 3.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4337 PF14235.6 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.38 10.9 3.6 0.52 10.4 3.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) bZIP_2 PF07716.15 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.66 10.1 8.9 0.49 10.5 5.0 2.2 1 1 1 2 2 2 0 Basic region leucine zipper HAGH_C PF16123.5 NODE_40067_length_519_cov_74.553719_g32613_i0reverse_frame_3 - 3.1e-18 66.0 0.7 5.9e-18 65.2 0.1 1.7 1 1 1 2 2 2 1 Hydroxyacylglutathione hydrolase C-terminus FIIND PF13553.6 NODE_40067_length_519_cov_74.553719_g32613_i0reverse_frame_3 - 0.032 13.6 0.2 0.041 13.3 0.2 1.2 1 0 0 1 1 1 0 Function to find NAR2 PF16974.5 NODE_40056_length_519_cov_89.679752_g32602_i0forward_frame_3 - 0.057 12.8 0.1 0.087 12.2 0.1 1.2 1 0 0 1 1 1 0 High-affinity nitrate transporter accessory RskA PF10099.9 NODE_40047_length_519_cov_125.202479_g32593_i0reverse_frame_2 - 0.05 13.9 8.7 0.067 13.5 8.7 1.3 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF3459 PF11941.8 NODE_40035_length_519_cov_183.382231_g32582_i0forward_frame_2 - 0.067 13.5 0.0 0.22 11.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3459) Ribosomal_L40e PF01020.17 NODE_40035_length_519_cov_183.382231_g32582_i0forward_frame_2 - 0.089 12.7 0.8 0.089 12.7 0.8 1.8 2 0 0 2 2 2 0 Ribosomal L40e family mTERF PF02536.14 ORF99039 - 6e-29 101.0 0.1 7.2e-29 100.7 0.1 1.1 1 0 0 1 1 1 1 mTERF CtsR PF05848.11 ORF99039 - 3.1e-06 27.0 0.2 1.8 8.6 0.0 3.2 1 1 2 3 3 3 3 CtsR N-terminal HTH domain DUF1127 PF06568.11 ORF99039 - 1.5e-05 24.6 0.4 4.4 7.1 0.0 3.3 3 0 0 3 3 3 3 Domain of unknown function (DUF1127) DUF4743 PF15916.5 ORF99039 - 0.0021 18.0 0.0 16 5.5 0.0 3.1 1 1 2 3 3 3 1 Domain of unknown function (DUF4743) HHH_4 PF14490.6 ORF99039 - 0.0059 16.6 0.0 11 6.1 0.0 3.1 1 1 2 3 3 3 1 Helix-hairpin-helix containing domain YqgB PF11036.8 ORF99039 - 0.0072 16.0 0.1 38 4.1 0.0 3.3 3 0 0 3 3 3 0 Virulence promoting factor HTH_31 PF13560.6 ORF99039 - 0.0072 16.6 0.0 40 4.7 0.0 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_3 PF01381.22 ORF99039 - 0.015 15.3 0.0 44 4.2 0.0 3.4 3 0 0 3 3 3 0 Helix-turn-helix Peptidase_M43 PF05572.13 ORF99039 - 0.11 12.4 0.0 57 3.6 0.0 3.0 1 1 2 3 3 3 0 Pregnancy-associated plasma protein-A SPRY PF00622.28 ORF98762 - 4.4e-12 46.2 0.0 5.6e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 SPRY domain CTP_transf_like PF01467.26 ORF98673 - 7.6e-08 32.7 0.0 1.1e-07 32.2 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase-like STAR_dimer PF16544.5 ORF98474 - 0.034 13.7 0.7 4.2 7.0 0.2 2.3 2 0 0 2 2 2 0 Homodimerisation region of STAR domain protein Ank_2 PF12796.7 ORF97255 - 1.1e-08 35.6 0.1 0.0011 19.5 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF97255 - 7.1e-08 32.6 0.6 0.01 16.2 0.4 3.3 2 1 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF97255 - 1.9e-06 27.8 1.2 1.3 9.8 0.0 4.0 3 1 1 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF97255 - 3e-06 27.4 2.0 0.25 11.7 0.0 3.4 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF97255 - 0.0019 18.7 0.9 0.34 11.5 0.0 3.3 3 1 0 3 3 3 1 Ankyrin repeats (many copies) CS PF04969.16 ORF96587 - 2.3e-10 41.4 0.1 3.7e-10 40.7 0.1 1.3 1 0 0 1 1 1 1 CS domain Dynein_light PF01221.18 ORF96587 - 0.2 12.0 0.0 0.32 11.3 0.0 1.3 1 0 0 1 1 1 0 Dynein light chain type 1 PUA PF01472.20 ORF96392 - 9.8e-11 41.5 0.4 9.8e-11 41.5 0.4 2.4 2 1 0 2 2 2 1 PUA domain YqfQ PF14181.6 ORF96392 - 5 7.3 10.4 7.4 6.7 10.4 1.3 1 0 0 1 1 1 0 YqfQ-like protein SPRY PF00622.28 ORF96078 - 4.4e-12 46.2 0.0 5.6e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 SPRY domain RasGAP_C PF03836.15 ORF95796 - 0.0083 16.3 1.0 0.35 11.0 0.4 2.2 2 0 0 2 2 2 2 RasGAP C-terminus DUF3437 PF11919.8 ORF95796 - 0.11 12.5 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) PAP2 PF01569.21 ORF95169 - 8e-12 45.1 2.7 2.6e-11 43.4 2.7 1.8 1 1 0 1 1 1 1 PAP2 superfamily DUF1538 PF07556.11 ORF95169 - 0.00097 18.5 0.4 0.0013 18.1 0.4 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1538) LrgB PF04172.16 ORF95169 - 0.0089 15.6 0.2 0.015 14.8 0.2 1.4 1 0 0 1 1 1 1 LrgB-like family PAP2_3 PF14378.6 ORF95169 - 0.018 14.7 0.5 0.032 13.9 0.5 1.5 1 0 0 1 1 1 0 PAP2 superfamily DUF543 PF04418.12 ORF95169 - 0.47 10.5 2.5 0.53 10.3 0.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF543) RDD PF06271.12 ORF94363 - 2.1 8.5 7.1 13 6.0 6.9 2.0 1 1 0 1 1 1 0 RDD family FKBP_C PF00254.28 ORF94009 - 2.5e-21 75.8 0.0 3.9e-16 59.1 0.0 2.1 2 0 0 2 2 2 2 FKBP-type peptidyl-prolyl cis-trans isomerase APG5 PF04106.12 ORF92890 - 0.032 13.8 1.1 0.052 13.1 0.9 1.5 1 1 1 2 2 2 0 Autophagy protein Apg5 Ank_2 PF12796.7 ORF92280 - 1.1e-08 35.5 0.1 0.0011 19.5 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF92280 - 7e-08 32.6 0.6 0.01 16.2 0.4 3.3 2 1 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF92280 - 1.9e-06 27.7 1.2 1.3 9.8 0.0 4.0 3 1 1 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF92280 - 3.1e-06 27.4 2.0 0.25 11.7 0.0 3.4 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF92280 - 0.002 18.7 0.9 0.34 11.5 0.0 3.2 3 1 0 3 3 3 1 Ankyrin repeats (many copies) APG5 PF04106.12 ORF90387 - 0.032 13.8 1.1 0.052 13.1 0.9 1.5 1 1 1 2 2 2 0 Autophagy protein Apg5 Porin_OmpG PF09381.10 ORF90165 - 3.3e-66 224.0 5.1 3.7e-66 223.8 5.1 1.0 1 0 0 1 1 1 1 Outer membrane protein G (OmpG) OMP_b-brl PF13505.6 ORF90165 - 1.1e-06 28.8 8.2 1.6e-06 28.4 8.2 1.2 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain DUF2490 PF10677.9 ORF90165 - 9.1e-05 22.5 1.7 0.058 13.3 0.3 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF2490) DUF481 PF04338.12 ORF90165 - 0.00052 20.1 1.4 0.0012 18.9 0.3 1.9 2 0 0 2 2 2 1 Protein of unknown function, DUF481 DUF3187 PF11383.8 ORF90165 - 0.007 15.6 0.3 0.16 11.1 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3187) Porin_4 PF13609.6 ORF90165 - 0.1 12.3 6.8 0.28 10.9 6.8 1.6 1 1 0 1 1 1 0 Gram-negative porin OmpA_membrane PF01389.17 ORF90165 - 0.15 11.8 4.5 1.2 8.9 0.8 2.2 1 1 0 2 2 2 0 OmpA-like transmembrane domain Jacalin PF01419.17 ORF89296 - 2.6e-08 33.8 0.6 3.6e-08 33.4 0.6 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain OTCace_N PF02729.21 ORF88607 - 0.13 12.3 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Jacalin PF01419.17 ORF87638 - 3.6e-07 30.2 0.1 4.5e-07 29.9 0.1 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks123.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks123.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks123.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks123.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:49:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RhoGEF PF00621.20 ORF85628 - 0.027 14.7 0.2 0.035 14.4 0.2 1.2 1 0 0 1 1 1 0 RhoGEF domain DUF3278 PF11683.8 ORF85628 - 0.052 13.6 0.6 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3278) BLI1 PF17324.2 ORF84516 - 0.48 11.1 15.7 0.62 10.8 6.4 2.3 1 1 1 2 2 2 0 BLOC-1 interactor 1 OAS1_C PF10421.9 ORF83655 - 0.0013 18.2 0.1 0.35 10.3 0.0 2.1 2 0 0 2 2 2 2 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus Chloroplast_duf PF14476.6 ORF83110 - 0.02 13.9 0.0 0.023 13.7 0.0 1.0 1 0 0 1 1 1 0 Petal formation-expressed Herpes_pp38 PF04846.13 ORF83110 - 0.055 13.4 0.3 0.097 12.6 0.3 1.4 1 0 0 1 1 1 0 Herpesvirus pp38 phosphoprotein zf-C3HC4_2 PF13923.6 ORF82789 - 1.1e-08 34.8 9.7 1.8e-08 34.0 9.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF82789 - 1.4e-08 34.4 9.9 2.3e-08 33.8 9.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF82789 - 1.7e-08 34.5 9.0 2.6e-08 33.9 9.0 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 ORF82789 - 2.1e-08 34.3 8.1 3.2e-08 33.8 8.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF82789 - 2e-07 30.8 9.1 2.9e-07 30.3 9.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) YEATS PF03366.16 ORF82789 - 2.8e-07 30.4 3.3 9.5e-07 28.7 0.6 2.3 2 1 0 2 2 2 1 YEATS family zf-RING_5 PF14634.6 ORF82789 - 3e-07 30.3 8.7 5.2e-07 29.5 8.7 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF82789 - 2.2e-06 27.6 8.7 4.8e-06 26.5 8.7 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF82789 - 1.7e-05 24.8 4.5 3.7e-05 23.7 4.5 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 ORF82789 - 0.00012 21.8 5.3 0.00024 20.8 5.3 1.5 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Prok-RING_4 PF14447.6 ORF82789 - 0.00017 21.4 7.8 0.00029 20.6 7.8 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_6 PF14835.6 ORF82789 - 0.0044 16.9 2.2 0.0081 16.0 2.2 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-rbx1 PF12678.7 ORF82789 - 0.0065 16.7 8.7 0.042 14.1 8.7 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 ORF82789 - 0.018 15.2 7.8 0.037 14.2 7.8 1.5 1 1 0 1 1 1 0 zinc RING finger of MSL2 Baculo_IE-1 PF05290.11 ORF82789 - 0.027 14.4 3.8 0.065 13.2 3.8 1.7 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) zf-RING_4 PF14570.6 ORF82789 - 0.092 12.6 6.1 0.23 11.3 6.1 1.8 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zinc_ribbon_4 PF13717.6 ORF82789 - 0.2 11.6 6.3 0.47 10.4 3.1 3.0 1 1 1 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 ORF82789 - 0.76 9.6 0.1 0.76 9.6 0.1 3.0 2 1 1 3 3 3 0 zinc-ribbon domain zf-C6H2 PF15801.5 ORF82789 - 2 8.8 7.4 6.8 7.1 2.5 2.5 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding FYVE PF01363.21 ORF82789 - 2.8 8.1 8.3 21 5.3 8.4 2.2 1 1 0 1 1 1 0 FYVE zinc finger zf-RING_11 PF17123.5 ORF82789 - 3.6 7.4 14.7 18 5.2 8.9 2.9 1 1 1 2 2 2 0 RING-like zinc finger MRFAP1 PF15155.6 ORF82564 - 0.0067 16.9 0.1 0.016 15.8 0.1 1.6 1 0 0 1 1 1 1 MORF4 family-associated protein1 MHB PF16525.5 ORF82564 - 0.083 13.2 1.8 0.33 11.2 1.7 2.2 1 1 1 2 2 2 0 Haemophore, haem-binding ING PF12998.7 ORF82564 - 0.27 11.8 3.5 8.9 7.0 1.2 2.2 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding DUF4407 PF14362.6 ORF82564 - 2 7.7 6.4 2.5 7.4 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) tRNA_anti-like PF12869.7 ORF8243 - 0.0014 18.2 0.1 0.0022 17.6 0.1 1.2 1 0 0 1 1 1 1 tRNA_anti-like Cid2 PF09774.9 ORF8243 - 0.097 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Caffeine-induced death protein 2 FTR1 PF03239.14 ORF8243 - 0.23 10.6 0.2 0.28 10.3 0.2 1.1 1 0 0 1 1 1 0 Iron permease FTR1 family Jacalin PF01419.17 ORF80069 - 3.7e-09 36.6 0.5 5e-09 36.2 0.5 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain EF-hand_1 PF00036.32 ORF78623 - 2e-08 33.2 5.5 1.1e-05 24.6 0.0 2.5 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF78623 - 2.9e-08 34.0 0.1 4e-08 33.6 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF78623 - 2.3e-07 30.2 0.7 0.00041 20.0 0.1 2.5 1 1 1 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF78623 - 0.00018 20.8 4.8 0.00078 18.8 0.1 2.8 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF78623 - 0.00041 20.1 0.5 0.0033 17.2 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF78623 - 0.00044 20.5 0.0 0.00063 20.1 0.0 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region FAP PF07174.11 ORF78623 - 0.0045 16.5 3.1 0.0052 16.3 3.1 1.1 1 0 0 1 1 1 1 Fibronectin-attachment protein (FAP) Aldo_ket_red PF00248.21 ORF77712 - 1.5e-24 86.7 0.0 1.9e-24 86.4 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family Flavodoxin_1 PF00258.25 ORF77236 - 5.6e-19 68.8 0.4 9.5e-19 68.0 0.4 1.4 1 0 0 1 1 1 1 Flavodoxin DAHP_synth_1 PF00793.20 ORF77236 - 0.071 12.0 0.0 0.092 11.6 0.0 1.1 1 0 0 1 1 1 0 DAHP synthetase I family S4 PF01479.25 ORF76893 - 4.4e-10 39.1 0.7 4.4e-10 39.1 0.7 2.0 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.19 ORF76893 - 4.8e-06 27.4 0.8 7.1e-06 26.9 0.6 1.5 1 1 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain APG5 PF04106.12 ORF75631 - 0.031 13.8 1.1 0.049 13.2 0.9 1.5 1 1 1 2 2 2 0 Autophagy protein Apg5 ANAPC4_WD40 PF12894.7 ORF73413 - 1.8e-08 34.6 0.8 5.3e-07 29.9 0.4 2.1 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF73413 - 5.5e-07 30.2 0.5 0.023 15.6 0.0 2.6 2 0 0 2 2 2 2 WD domain, G-beta repeat PTA_PTB PF01515.19 ORF72632 - 3.4e-67 227.0 0.4 3.8e-67 226.9 0.4 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase CCDC92 PF14916.6 ORF72192 - 0.00048 19.8 0.7 0.0014 18.4 0.7 1.8 1 0 0 1 1 1 1 Coiled-coil domain of unknown function DUF2478 PF10649.9 ORF71657 - 0.15 11.6 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2478) S1 PF00575.23 ORF71037 - 2.2e-10 40.7 0.1 2.4e-09 37.4 0.1 2.2 2 0 0 2 2 2 1 S1 RNA binding domain Oxysterol_BP PF01237.18 ORF7033 - 7.3e-16 58.0 0.0 9e-16 57.7 0.0 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Abhydro_lipase PF04083.16 ORF69483 - 5.1e-21 74.0 0.0 9.6e-21 73.1 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF69483 - 7.5e-11 42.2 0.1 9.9e-11 41.8 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF69483 - 0.00042 19.6 0.0 0.00067 19.0 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Ank_2 PF12796.7 ORF6893 - 7.4e-08 32.9 0.1 0.016 15.8 0.0 2.6 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF6893 - 1.1e-05 25.6 0.2 0.34 11.4 0.0 3.0 2 1 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF6893 - 3.4e-05 23.9 1.1 3.9 8.3 0.0 4.2 4 1 1 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF6893 - 0.00037 20.7 0.9 0.041 14.2 0.1 2.8 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF6893 - 0.0017 18.9 0.2 1.7 9.4 0.0 2.7 2 1 0 2 2 2 2 Ankyrin repeats (many copies) MurB_C PF02873.16 ORF6893 - 0.11 12.5 0.0 3.6 7.7 0.0 2.1 2 0 0 2 2 2 0 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JIP_LZII PF16471.5 ORF67622 - 0.007 16.5 0.1 0.016 15.3 0.1 1.6 1 0 0 1 1 1 1 JNK-interacting protein leucine zipper II DUF2205 PF10224.9 ORF67622 - 0.046 13.7 0.1 0.096 12.7 0.1 1.5 1 0 0 1 1 1 0 Short coiled-coil protein WD40 PF00400.32 ORF6649 - 0.068 14.1 1.5 0.14 13.1 0.0 2.3 2 1 0 2 2 2 0 WD domain, G-beta repeat SPRY PF00622.28 ORF63163 - 4.4e-12 46.2 0.0 5.6e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 SPRY domain R2K_3 PF14243.6 ORF62453 - 0.016 15.3 0.2 0.029 14.4 0.2 1.4 1 1 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 BAGE PF08180.11 ORF61963 - 0.13 12.3 0.1 0.63 10.2 0.0 2.2 2 0 0 2 2 2 0 B melanoma antigen family Ring_hydroxyl_B PF00866.18 ORF61057 - 2.8e-49 166.9 5.2 3.2e-49 166.7 5.2 1.0 1 0 0 1 1 1 1 Ring hydroxylating beta subunit ubiquitin PF00240.23 ORF60413 - 1.2e-23 82.7 3.2 5.3e-15 54.9 0.1 2.9 2 1 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF60413 - 1.4e-08 34.4 2.9 3.3e-05 23.6 0.2 2.6 2 1 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF60413 - 0.018 15.5 2.2 0.34 11.4 0.1 2.9 2 2 0 2 2 2 0 Ubiquitin-like domain Plexin_cytopl PF08337.12 ORF60413 - 0.057 12.1 0.2 0.076 11.7 0.2 1.3 1 0 0 1 1 1 0 Plexin cytoplasmic RasGAP domain TBK1_ULD PF18396.1 ORF60413 - 0.096 12.6 0.1 0.22 11.4 0.0 1.7 2 0 0 2 2 2 0 TANK binding kinase 1 ubiquitin-like domain S1 PF00575.23 ORF58482 - 2.2e-10 40.7 0.1 2.4e-09 37.4 0.1 2.2 2 0 0 2 2 2 1 S1 RNA binding domain LMBR1 PF04791.16 ORF58119 - 3.2e-17 62.6 9.1 3.4e-17 62.5 9.1 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein CopD PF05425.13 ORF58119 - 0.036 14.5 3.0 0.069 13.6 3.0 1.5 1 0 0 1 1 1 0 Copper resistance protein D DUF1230 PF06799.11 ORF58119 - 0.24 11.5 2.5 0.78 9.8 0.1 2.0 2 0 0 2 2 2 0 Conserved in the green lineage and diatoms 27 DUF4293 PF14126.6 ORF58119 - 0.32 11.3 7.5 1.2 9.4 1.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4293) 7tm_1 PF00001.21 ORF58119 - 2 7.7 5.6 1.3 8.3 0.4 2.2 2 0 0 2 2 2 0 7 transmembrane receptor (rhodopsin family) DHHC PF01529.20 ORF58119 - 6.3 6.9 9.1 2.4 8.2 2.2 2.1 2 0 0 2 2 2 0 DHHC palmitoyltransferase Fer4_6 PF12837.7 ORF57534 - 0.14 12.3 1.5 0.29 11.3 1.5 1.5 1 0 0 1 1 1 0 4Fe-4S binding domain HEAT_2 PF13646.6 ORF56937 - 6.6e-05 23.2 0.0 0.0016 18.8 0.0 2.2 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF56937 - 0.015 15.5 0.0 8.5 6.9 0.0 3.4 3 0 0 3 3 3 0 HEAT repeat DUF4154 PF13689.6 ORF56147 - 1.9e-29 102.7 0.0 2.2e-29 102.5 0.0 1.1 1 0 0 1 1 1 1 YfiR/HmsC-like ABC_tran PF00005.27 ORF52929 - 1.5e-11 45.0 0.3 4.9e-11 43.3 0.0 1.9 2 1 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF52929 - 3.6e-07 29.8 0.2 5.6e-07 29.2 0.2 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 ORF52929 - 4.2e-07 29.1 0.0 7.5e-07 28.3 0.0 1.4 1 1 0 1 1 1 1 Predicted ATPase of the ABC class SbcCD_C PF13558.6 ORF52929 - 0.0011 19.1 0.5 0.026 14.7 0.5 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit Dus PF01207.17 ORF52929 - 0.016 14.3 0.1 0.027 13.6 0.1 1.3 1 1 0 1 1 1 0 Dihydrouridine synthase (Dus) PilO PF04350.13 ORF52929 - 0.047 13.8 0.2 0.12 12.5 0.1 1.7 1 1 1 2 2 2 0 Pilus assembly protein, PilO GABP-alpha PF11620.8 ORF52514 - 0.19 12.0 0.0 0.31 11.3 0.0 1.4 1 0 0 1 1 1 0 GA-binding protein alpha chain Glyco_trans_1_4 PF13692.6 ORF51364 - 5.4e-19 69.0 0.1 6.5e-19 68.7 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 ORF51364 - 2.3e-15 56.5 0.0 2.8e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF51364 - 0.009 16.4 0.0 0.014 15.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 EF-hand_6 PF13405.6 ORF51015 - 0.00035 20.3 0.1 0.00089 19.0 0.0 1.7 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF51015 - 0.0009 19.6 0.0 0.002 18.6 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF51015 - 0.013 15.0 0.0 0.03 13.9 0.0 1.6 1 0 0 1 1 1 0 EF hand Selenoprotein_S PF06936.11 ORF51015 - 0.045 13.6 0.1 0.045 13.6 0.1 1.6 2 0 0 2 2 2 0 Selenoprotein S (SelS) EF-hand_5 PF13202.6 ORF51015 - 0.23 11.0 0.8 0.57 9.8 0.0 2.0 2 0 0 2 2 2 0 EF hand Ank_2 PF12796.7 ORF50901 - 1.5e-06 28.7 0.0 0.093 13.3 0.0 2.5 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF50901 - 4.7e-06 26.8 0.2 0.15 12.4 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF50901 - 4.4e-05 23.7 0.1 1.3 9.6 0.1 3.3 2 1 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF50901 - 0.00019 21.6 0.1 2.5 9.0 0.0 4.0 3 1 1 4 4 4 1 Ankyrin repeat MurB_C PF02873.16 ORF50901 - 0.011 15.8 0.0 0.57 10.2 0.0 2.1 2 0 0 2 2 2 0 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Ank_4 PF13637.6 ORF50901 - 0.018 15.6 0.1 1.2 9.8 0.0 2.8 3 0 0 3 3 3 0 Ankyrin repeats (many copies) LigT_PEase PF02834.16 ORF50901 - 0.059 13.6 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 LigT like Phosphoesterase PAP2 PF01569.21 ORF50484 - 5.8e-24 84.4 4.2 6.8e-24 84.2 4.2 1.1 1 0 0 1 1 1 1 PAP2 superfamily PqqD PF05402.12 ORF48974 - 0.019 15.3 0.1 0.041 14.2 0.1 1.5 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) SepRS_C PF18006.1 ORF48928 - 5e-05 23.3 0.1 2.9 8.1 0.0 4.9 4 2 2 6 6 6 1 O-phosphoseryl-tRNA synthetase C-terminal domain DUF4873 PF16170.5 ORF48928 - 0.2 11.9 6.3 4.2 7.7 0.1 3.3 1 1 3 4 4 4 0 Domain of unknown function (DUF4873) DUF2020 PF09449.10 ORF48928 - 2.9 7.7 9.5 3.7 7.4 0.1 3.4 1 1 2 4 4 4 0 Domain of unknown function (DUF2020) MS_channel PF00924.18 ORF48103 - 3.4e-44 150.9 0.1 3.8e-44 150.7 0.1 1.0 1 0 0 1 1 1 1 Mechanosensitive ion channel Aldo_ket_red PF00248.21 ORF47630 - 1.4e-33 116.4 0.1 1.6e-33 116.2 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF2417 PF10329.9 ORF46830 - 0.0076 15.7 0.4 0.0095 15.4 0.4 1.1 1 0 0 1 1 1 1 Region of unknown function (DUF2417) ATP11 PF06644.11 ORF46830 - 0.031 14.1 0.5 0.029 14.2 0.5 1.1 1 0 0 1 1 1 0 ATP11 protein Band_3_cyto PF07565.13 ORF46830 - 0.097 12.5 1.4 0.14 11.9 1.4 1.2 1 0 0 1 1 1 0 Band 3 cytoplasmic domain SR-25 PF10500.9 ORF46830 - 0.099 12.2 20.2 0.14 11.8 20.2 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Macoilin PF09726.9 ORF46830 - 0.12 10.9 5.6 0.15 10.5 5.6 1.1 1 0 0 1 1 1 0 Macoilin family Corona_nucleoca PF00937.18 ORF46830 - 0.89 8.5 6.5 1.1 8.2 6.5 1.1 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein DUF515 PF04415.12 ORF46830 - 1.9 6.8 9.7 2.4 6.4 9.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) FA_desaturase PF00487.24 ORF46385 - 0.079 12.8 8.1 0.1 12.4 8.1 1.3 1 0 0 1 1 1 0 Fatty acid desaturase T2SSF PF00482.23 ORF46385 - 0.2 11.6 0.0 0.2 11.6 0.0 2.2 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein F TraG_N PF07916.11 ORF46385 - 1.5 7.6 11.6 1.7 7.4 11.6 1.1 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF2207 PF09972.9 ORF46385 - 6.8 5.3 12.1 8.3 5.0 12.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1700 PF08006.11 ORF46385 - 8 6.0 13.3 10 5.6 13.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Tetraspanin PF00335.20 ORF46385 - 9.5 5.9 13.6 12 5.6 13.6 1.2 1 0 0 1 1 1 0 Tetraspanin family DUF4191 PF13829.6 ORF46385 - 9.9 5.4 9.2 12 5.2 9.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Homeobox_KN PF05920.11 ORF46183 - 4.3e-11 42.5 1.4 8.3e-11 41.6 1.4 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF46183 - 7.8e-09 35.3 1.0 7.8e-09 35.3 1.0 1.7 2 0 0 2 2 2 1 Homeodomain Homez PF11569.8 ORF46183 - 0.0058 16.1 0.0 0.012 15.0 0.0 1.5 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez MIF4G_like_2 PF09090.11 ORF45996 - 1.2e-12 47.9 3.6 1.5e-12 47.6 3.6 1.1 1 0 0 1 1 1 1 MIF4G like zf-Tim10_DDP PF02953.15 ORF45996 - 0.042 13.5 0.1 0.095 12.4 0.1 1.6 1 0 0 1 1 1 0 Tim10/DDP family zinc finger TPT PF03151.16 ORF45463 - 2.6e-06 27.0 3.6 3e-06 26.8 3.1 1.2 1 1 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF45463 - 0.095 12.9 7.7 0.15 12.2 7.7 1.5 1 1 0 1 1 1 0 EamA-like transporter family LapA_dom PF06305.11 ORF45463 - 0.12 12.2 1.8 0.13 12.1 0.4 1.8 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain SRP19 PF01922.17 ORF4537 - 3.2e-30 104.9 0.1 3.2e-30 104.9 0.1 1.5 2 0 0 2 2 2 1 SRP19 protein End3 PF12761.7 ORF45206 - 0.01 16.0 3.8 0.015 15.5 3.8 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 PTA_PTB PF01515.19 ORF44902 - 8.6e-78 261.8 0.4 9.6e-78 261.7 0.4 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase Abhydro_lipase PF04083.16 ORF44128 - 5.1e-21 74.0 0.0 9.6e-21 73.1 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF44128 - 7.5e-11 42.2 0.1 9.9e-11 41.8 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF44128 - 0.00042 19.6 0.0 0.00067 19.0 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 JIP_LZII PF16471.5 ORF42653 - 0.007 16.5 0.1 0.016 15.3 0.1 1.6 1 0 0 1 1 1 1 JNK-interacting protein leucine zipper II DUF2205 PF10224.9 ORF42653 - 0.046 13.7 0.1 0.096 12.7 0.1 1.5 1 0 0 1 1 1 0 Short coiled-coil protein ArAE_1 PF06081.11 ORF41174 - 0.031 14.4 0.3 2.6 8.2 0.0 2.3 2 0 0 2 2 2 0 Aromatic acid exporter family member 1 RbcS PF12338.8 ORF41174 - 4 7.7 5.5 34 4.7 0.1 3.2 4 0 0 4 4 4 0 Ribulose-1,5-bisphosphate carboxylase small subunit Flavodoxin_1 PF00258.25 ORF4105 - 5.6e-19 68.8 0.4 9.5e-19 68.0 0.4 1.4 1 0 0 1 1 1 1 Flavodoxin DAHP_synth_1 PF00793.20 ORF4105 - 0.071 12.0 0.0 0.092 11.6 0.0 1.1 1 0 0 1 1 1 0 DAHP synthetase I family DUF418 PF04235.12 ORF4046 - 0.04 13.8 0.4 0.053 13.5 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF418) PLDc_2 PF13091.6 ORF36851 - 3.5e-22 78.7 0.0 5.2e-22 78.2 0.0 1.2 1 0 0 1 1 1 1 PLD-like domain PLDc PF00614.22 ORF36851 - 2.5e-05 24.3 0.0 6.1e-05 23.0 0.0 1.7 1 0 0 1 1 1 1 Phospholipase D Active site motif Flavodoxin_1 PF00258.25 ORF36460 - 5.6e-19 68.8 0.4 9.5e-19 68.0 0.4 1.4 1 0 0 1 1 1 1 Flavodoxin DAHP_synth_1 PF00793.20 ORF36460 - 0.071 12.0 0.0 0.092 11.6 0.0 1.1 1 0 0 1 1 1 0 DAHP synthetase I family ICL PF00463.21 ORF36016 - 1.9e-38 132.3 0.3 1.4e-23 83.3 0.0 2.0 1 1 1 2 2 2 2 Isocitrate lyase family UPA_2 PF17809.1 ORF35487 - 0.045 13.6 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 UPA domain 2OG-FeII_Oxy_2 PF13532.6 ORF34509 - 1.4e-08 35.2 0.0 1.8e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily STAR_dimer PF16544.5 ORF33153 - 0.034 13.7 0.7 4.2 7.0 0.2 2.3 2 0 0 2 2 2 0 Homodimerisation region of STAR domain protein Gal-3-0_sulfotr PF06990.11 ORF32286 - 0.092 11.6 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Galactose-3-O-sulfotransferase Strep_his_triad PF04270.13 ORF32286 - 0.1 12.6 0.0 0.31 11.1 0.0 1.7 2 0 0 2 2 2 0 Streptococcal histidine triad protein RRM_1 PF00076.22 ORF31783 - 1.5e-14 53.5 0.0 3.2e-08 33.3 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) cNMP_binding PF00027.29 ORF31231 - 4.9e-11 42.6 0.0 1e-10 41.5 0.0 1.5 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain Kelch_1 PF01344.25 ORF3050 - 0.0012 18.4 0.6 0.0044 16.6 0.2 2.1 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 ORF3050 - 0.041 14.2 1.1 0.54 10.6 0.1 2.8 3 0 0 3 3 3 0 Kelch motif Kelch_5 PF13854.6 ORF3050 - 0.082 12.9 0.1 0.21 11.6 0.1 1.7 1 0 0 1 1 1 0 Kelch motif UQ_con PF00179.26 ORF29574 - 1.2e-34 118.9 0.0 1.4e-34 118.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF29574 - 0.0065 16.7 0.2 0.0077 16.5 0.3 1.4 1 1 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 ORF29574 - 0.046 13.4 0.0 0.05 13.3 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family B TBCA PF02970.16 ORF29574 - 0.094 13.1 0.0 0.28 11.5 0.0 1.6 2 0 0 2 2 2 0 Tubulin binding cofactor A RhoGEF PF00621.20 ORF294 - 0.027 14.7 0.2 0.035 14.4 0.2 1.2 1 0 0 1 1 1 0 RhoGEF domain DUF3278 PF11683.8 ORF294 - 0.052 13.6 0.6 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3278) HATPase_c PF02518.26 ORF28900 - 5.6e-23 81.6 0.0 7.9e-23 81.1 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 ORF28900 - 8.1e-07 28.9 0.0 1.1e-06 28.5 0.0 1.2 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 ORF28900 - 8.5e-05 22.5 0.0 0.00012 22.0 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain eIF-3c_N PF05470.12 ORF28828 - 0.024 13.0 0.0 0.03 12.7 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus GAS PF13851.6 ORF28828 - 0.47 9.8 2.8 0.59 9.5 2.8 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Pkinase PF00069.25 ORF27957 - 1.3e-17 64.1 0.0 1.6e-17 63.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain PKD_3 PF16820.5 ORF25766 - 0.02 14.6 0.1 0.042 13.6 0.1 1.5 1 0 0 1 1 1 0 PKD-like domain Ank_2 PF12796.7 ORF2491 - 2e-07 31.5 0.0 0.015 15.8 0.0 2.6 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF2491 - 1.3e-06 28.6 0.3 0.041 14.2 0.1 3.2 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF2491 - 8.3e-06 26.0 0.1 0.34 11.4 0.0 3.2 2 1 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF2491 - 2.8e-05 24.1 0.5 2.5 9.0 0.0 4.1 4 1 1 5 5 5 2 Ankyrin repeat MurB_C PF02873.16 ORF2491 - 0.018 15.1 0.0 0.57 10.2 0.0 2.1 2 0 0 2 2 2 0 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Ank_4 PF13637.6 ORF2491 - 0.026 15.1 0.1 1.7 9.4 0.0 2.7 3 0 0 3 3 3 0 Ankyrin repeats (many copies) LigT_PEase PF02834.16 ORF2491 - 0.062 13.5 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 LigT like Phosphoesterase TCTP PF00838.17 ORF24784 - 9.3e-21 74.9 1.1 1.1e-20 74.7 1.1 1.0 1 0 0 1 1 1 1 Translationally controlled tumour protein DUF5393 PF17371.2 ORF22012 - 0.14 10.3 0.6 0.17 10.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5393) Amidase PF01425.21 ORF21086 - 5.2e-12 45.5 0.0 5.4e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 Amidase JIP_LZII PF16471.5 ORF19483 - 0.007 16.5 0.1 0.016 15.3 0.1 1.6 1 0 0 1 1 1 1 JNK-interacting protein leucine zipper II DUF2205 PF10224.9 ORF19483 - 0.046 13.7 0.1 0.096 12.7 0.1 1.5 1 0 0 1 1 1 0 Short coiled-coil protein RRN9 PF10680.9 ORF14876 - 0.024 14.9 0.6 0.04 14.2 0.6 1.4 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor DUF4716 PF15837.5 ORF14876 - 2.7 8.1 14.4 2 8.6 1.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) Mito_carr PF00153.27 ORF14856 - 8.8e-24 83.3 0.0 3.3e-18 65.4 0.0 2.2 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF2061 PF09834.9 ORF14856 - 0.055 14.0 0.5 0.055 14.0 0.5 1.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2061) PBP1_TM PF14812.6 ORF14856 - 0.15 12.5 1.3 0.21 12.0 1.3 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Amidase PF01425.21 ORF14208 - 5.2e-12 45.5 0.0 5.4e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 Amidase YGGT PF02325.17 ORF13825 - 1.7e-33 114.8 24.4 2e-18 66.6 3.8 2.5 2 1 1 3 3 3 2 YGGT family ELFV_dehydrog PF00208.21 ORF1367 - 4.6e-23 82.2 0.0 6.2e-23 81.8 0.0 1.2 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Bac_GDH PF05088.12 ORF1367 - 0.00033 18.3 0.0 0.00037 18.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial NAD-glutamate dehydrogenase Semialdhyde_dh PF01118.24 ORF1367 - 0.16 12.4 0.0 0.29 11.6 0.0 1.4 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain APG5 PF04106.12 ORF111992 - 0.032 13.8 1.1 0.052 13.1 0.9 1.5 1 1 1 2 2 2 0 Autophagy protein Apg5 Pro_isomerase PF00160.21 ORF110153 - 6.1e-49 166.3 0.2 6.8e-49 166.2 0.2 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APG5 PF04106.12 ORF109065 - 0.031 13.8 1.1 0.049 13.2 0.9 1.5 1 1 1 2 2 2 0 Autophagy protein Apg5 ERGIC_N PF13850.6 ORF109036 - 0.0089 16.4 1.6 0.012 15.9 1.1 1.6 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF1600 PF07667.11 ORF109036 - 0.45 10.7 7.7 1.3 9.2 7.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1600) ERGIC_N PF13850.6 ORF108539 - 0.0089 16.4 1.6 0.012 15.9 1.1 1.6 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF1600 PF07667.11 ORF108539 - 0.45 10.7 7.7 1.3 9.2 7.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1600) EIID-AGA PF03613.14 ORF108536 - 3.9e-62 209.8 9.4 4.4e-62 209.7 9.4 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component Acyl_transf_3 PF01757.22 ORF108186 - 0.0015 17.6 6.4 0.002 17.2 6.4 1.1 1 0 0 1 1 1 1 Acyltransferase family Carb_anhydrase PF00194.21 ORF107755 - 6.8e-30 104.5 0.4 8.6e-30 104.1 0.4 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase UAA PF08449.11 ORF107543 - 8.2e-12 44.9 3.6 9.7e-12 44.7 3.6 1.1 1 0 0 1 1 1 1 UAA transporter family Glucan_synthase PF02364.15 ORF107543 - 0.014 13.6 0.1 0.019 13.2 0.1 1.2 1 0 0 1 1 1 0 1,3-beta-glucan synthase component LrgA PF03788.14 ORF107543 - 0.044 13.7 0.1 0.077 13.0 0.1 1.4 1 1 0 1 1 1 0 LrgA family ECF_trnsprt PF12822.7 ORF107543 - 0.069 13.2 4.9 0.1 12.7 4.9 1.4 1 1 0 1 1 1 0 ECF transporter, substrate-specific component DUF2448 PF10476.9 ORF107543 - 0.073 12.9 0.3 0.19 11.6 0.3 1.8 1 1 0 1 1 1 0 Protein of unknown function C-terminus (DUF2448) PgpA PF04608.13 ORF106334 - 6.1e-51 172.2 8.7 7e-51 172.0 8.7 1.0 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A TfoX_N PF04993.13 ORF106334 - 0.25 11.6 0.3 0.42 10.9 0.3 1.3 1 0 0 1 1 1 0 TfoX N-terminal domain DUF4281 PF14108.6 ORF106334 - 0.48 10.8 6.9 0.7 10.3 2.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4281) DUF572 PF04502.13 ORF103171 - 4.5 6.8 29.6 5.1 6.6 29.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) ERGIC_N PF13850.6 ORF102320 - 0.0089 16.4 1.6 0.012 15.9 1.1 1.6 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF1600 PF07667.11 ORF102320 - 0.45 10.7 7.7 1.3 9.2 7.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1600) SdpI PF13630.6 ORF10219 - 0.0066 16.6 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 SdpI/YhfL protein family CLZ PF16526.5 ORF101912 - 0.06 13.7 0.1 0.12 12.7 0.1 1.7 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DNA_Packaging PF11053.8 ORF101912 - 0.091 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Terminase DNA packaging enzyme SgrT PF15894.5 ORF101912 - 0.092 12.7 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT DUF4483 PF14825.6 NODE_40534_length_511_cov_2.254202_g33043_i0forward_frame_1 - 2.3e-08 34.0 0.0 3.5e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4483) Sex_peptide PF08138.11 NODE_40531_length_511_cov_2.420168_g33040_i0forward_frame_1 - 0.22 11.7 0.6 0.57 10.4 0.1 1.9 2 0 0 2 2 2 0 Sex peptide (SP) family Rsm1 PF08600.10 NODE_40521_length_511_cov_17.500000_g33030_i0forward_frame_1 - 0.092 12.9 0.4 0.14 12.3 0.4 1.3 1 0 0 1 1 1 0 Rsm1-like RCC1_2 PF13540.6 NODE_40506_length_511_cov_101.649160_g33016_i0reverse_frame_1 - 1.2e-08 34.6 10.5 0.066 13.0 0.1 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Yuri_gagarin PF15934.5 NODE_40506_length_511_cov_101.649160_g33016_i0reverse_frame_1 - 0.029 14.2 0.0 0.061 13.2 0.0 1.4 2 0 0 2 2 2 0 Yuri gagarin Hexapep_2 PF14602.6 NODE_40506_length_511_cov_101.649160_g33016_i0reverse_frame_1 - 0.051 13.3 0.4 6.5 6.6 0.0 3.3 3 0 0 3 3 3 0 Hexapeptide repeat of succinyl-transferase DUF4687 PF15747.5 NODE_40506_length_511_cov_101.649160_g33016_i0reverse_frame_1 - 1.2 9.7 3.4 69 4.0 0.1 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4687) ANAPC15 PF15243.6 NODE_40484_length_512_cov_2.249476_g33000_i0forward_frame_1 - 0.12 12.8 0.0 0.18 12.2 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 15 DUF948 PF06103.11 NODE_40483_length_512_cov_2.318658_g32999_i0forward_frame_1 - 0.24 11.7 4.1 3.5 7.9 0.3 3.0 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Lectin_N PF03954.14 NODE_40483_length_512_cov_2.318658_g32999_i0forward_frame_1 - 1.2 8.9 7.2 0.69 9.7 4.4 1.8 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Prominin PF05478.11 NODE_40483_length_512_cov_2.318658_g32999_i0forward_frame_1 - 2.7 5.8 5.9 1.3 6.9 3.9 1.4 1 1 0 1 1 1 0 Prominin LMBR1 PF04791.16 NODE_40483_length_512_cov_2.318658_g32999_i0forward_frame_1 - 6.4 5.6 12.2 7.2 5.4 12.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Xpo1 PF08389.12 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 4.3e-06 26.8 1.0 7.4e-06 26.1 1.0 1.4 1 0 0 1 1 1 1 Exportin 1-like protein Katanin_con80 PF13925.6 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 0.00079 19.5 0.0 0.18 11.9 0.0 2.3 1 1 1 2 2 2 2 con80 domain of Katanin IBN_N PF03810.19 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 0.016 15.1 0.2 9.8 6.2 0.0 3.0 3 1 0 3 3 3 0 Importin-beta N-terminal domain Vac14_Fab1_bd PF12755.7 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 0.056 14.0 1.6 0.11 13.0 1.6 1.7 1 1 0 1 1 1 0 Vacuolar 14 Fab1-binding region Totivirus_coat PF05518.11 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 0.08 11.0 0.0 0.11 10.6 0.0 1.1 1 0 0 1 1 1 0 Totivirus coat protein Lactococcin PF04369.13 NODE_40479_length_512_cov_3.270440_g32994_i1forward_frame_1 - 0.22 11.7 0.4 6 7.1 0.1 2.2 2 0 0 2 2 2 0 Lactococcin-like family PRA1 PF03208.19 NODE_40478_length_512_cov_3.280922_g32995_i0reverse_frame_1 - 0.17 11.5 13.2 0.071 12.7 9.9 1.8 1 1 1 2 2 2 0 PRA1 family protein GP41 PF00517.17 NODE_40478_length_512_cov_3.280922_g32995_i0reverse_frame_1 - 9.1 6.1 12.6 0.12 12.3 0.8 2.2 2 0 0 2 2 2 0 Retroviral envelope protein SOCS_box PF07525.16 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_1 - 0.046 14.1 5.1 0.34 11.3 5.1 2.2 1 1 0 1 1 1 0 SOCS box Lactococcin PF04369.13 NODE_40477_length_512_cov_3.354298_g32994_i0forward_frame_1 - 0.23 11.6 0.4 6 7.1 0.1 2.1 2 0 0 2 2 2 0 Lactococcin-like family Cyclin_C PF02984.19 NODE_40451_length_512_cov_173.911950_g32968_i0reverse_frame_1 - 0.083 13.0 0.4 0.083 13.0 0.4 1.9 2 1 0 2 2 2 0 Cyclin, C-terminal domain DUF3290 PF11694.8 NODE_40438_length_512_cov_517.914046_g32956_i0forward_frame_1 - 0.9 9.5 5.9 4.6 7.2 5.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3290) NOA36 PF06524.12 NODE_40431_length_512_cov_1965.067086_g31824_i1forward_frame_1 - 0.037 13.4 0.2 0.039 13.3 0.2 1.1 1 0 0 1 1 1 0 NOA36 protein DUF4832 PF16116.5 NODE_40429_length_512_cov_5275.303983_g32896_i2forward_frame_1 - 0.032 14.1 0.5 0.057 13.3 0.3 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4832) CBM_4_9 PF02018.17 NODE_40426_length_513_cov_2.140167_g32947_i0forward_frame_1 - 0.00063 20.0 0.5 0.00099 19.4 0.5 1.3 1 0 0 1 1 1 1 Carbohydrate binding domain Vpu PF00558.19 NODE_40421_length_513_cov_2.905858_g32942_i0forward_frame_1 - 0.056 13.2 0.0 0.09 12.6 0.0 1.2 1 0 0 1 1 1 0 Vpu protein DUF3841 PF12952.7 NODE_40399_length_513_cov_89.640167_g32921_i0reverse_frame_1 - 0.041 13.7 1.3 0.047 13.5 1.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3841) DUF4832 PF16116.5 NODE_40370_length_513_cov_5264.267782_g32896_i1reverse_frame_1 - 0.031 14.1 0.5 0.057 13.3 0.3 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4832) DUF4832 PF16116.5 NODE_40369_length_513_cov_5264.267782_g32896_i0forward_frame_1 - 0.029 14.2 0.5 0.057 13.3 0.3 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4832) Topoisom_bac PF01131.20 NODE_40361_length_514_cov_2.478079_g32890_i0forward_frame_3 - 1.4e-42 146.2 0.0 1.5e-42 146.1 0.0 1.0 1 0 0 1 1 1 1 DNA topoisomerase EcoR124_C PF12008.8 NODE_40361_length_514_cov_2.478079_g32890_i0forward_frame_3 - 0.035 13.8 0.0 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 Type I restriction and modification enzyme - subunit R C terminal CK_II_beta PF01214.18 NODE_40361_length_514_cov_2.478079_g32890_i0forward_frame_3 - 0.079 12.8 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Casein kinase II regulatory subunit BNR_6 PF15899.5 NODE_40361_length_514_cov_2.478079_g32890_i0forward_frame_3 - 0.13 12.4 0.0 0.31 11.2 0.0 1.6 1 0 0 1 1 1 0 BNR-Asp box repeat MbeD_MobD PF04899.12 NODE_40354_length_514_cov_3.091858_g32883_i0reverse_frame_3 - 0.022 14.9 3.3 0.19 11.9 0.5 2.6 1 1 1 2 2 2 0 MbeD/MobD like GLE1 PF07817.13 NODE_40354_length_514_cov_3.091858_g32883_i0reverse_frame_3 - 0.38 9.9 3.4 0.48 9.6 0.5 2.0 1 1 1 2 2 2 0 GLE1-like protein Baculo_PEP_C PF04513.12 NODE_40354_length_514_cov_3.091858_g32883_i0reverse_frame_3 - 0.42 10.7 8.5 5.8 6.9 8.5 2.2 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus FliJ PF02050.16 NODE_40354_length_514_cov_3.091858_g32883_i0reverse_frame_3 - 0.56 10.5 6.5 0.85 9.9 0.8 2.2 1 1 1 2 2 2 0 Flagellar FliJ protein DUF775 PF05603.12 NODE_40354_length_514_cov_3.091858_g32883_i0reverse_frame_3 - 0.82 9.2 5.1 1.4 8.5 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF775) AAA_19 PF13245.6 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 8.4e-06 26.2 0.4 1.4e-05 25.4 0.4 1.3 1 1 0 1 1 1 1 AAA domain DEAD PF00270.29 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 1e-05 25.4 0.4 2.1e-05 24.4 0.4 1.5 1 1 0 1 1 1 1 DEAD/DEAH box helicase T2SSE PF00437.20 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 2.5e-05 23.5 0.0 3.8e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 4e-05 23.9 0.2 8.9e-05 22.8 0.2 1.6 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.00073 19.6 0.0 0.94 9.5 0.0 2.1 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit AAA_30 PF13604.6 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.00075 19.3 0.0 0.0011 18.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.00092 18.5 0.0 0.0012 18.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) PhoH PF02562.16 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.0017 17.8 0.3 0.0023 17.4 0.1 1.6 1 1 1 2 2 2 1 PhoH-like protein NACHT PF05729.12 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.0018 18.2 0.9 0.0025 17.8 0.1 1.7 2 0 0 2 2 2 1 NACHT domain AAA_11 PF13086.6 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.009 15.8 1.1 0.17 11.6 0.1 2.1 1 1 1 2 2 2 1 AAA domain NTPase_1 PF03266.15 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.012 15.5 1.3 0.036 14.0 1.3 1.8 1 1 0 1 1 1 0 NTPase Flavi_DEAD PF07652.14 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.025 14.6 0.1 0.045 13.7 0.1 1.4 1 1 0 1 1 1 0 Flavivirus DEAD domain Zeta_toxin PF06414.12 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.028 13.7 0.2 0.067 12.5 0.1 1.7 1 1 1 2 2 2 0 Zeta toxin SRP54 PF00448.22 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.034 13.8 0.5 0.067 12.8 0.5 1.6 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_23 PF13476.6 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.05 14.1 0.0 0.066 13.7 0.0 1.3 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.057 13.9 0.2 0.09 13.3 0.1 1.5 1 1 0 1 1 1 0 ABC transporter RsgA_GTPase PF03193.16 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.063 13.2 0.0 0.091 12.7 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.068 13.5 0.1 0.13 12.6 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.091 12.5 0.1 0.19 11.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.11 12.1 0.1 0.15 11.6 0.1 1.5 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.12 11.9 0.1 0.14 11.7 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Myosin_head PF00063.21 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.14 10.4 0.0 0.17 10.0 0.0 1.1 1 0 0 1 1 1 0 Myosin head (motor domain) Helicase_RecD PF05127.14 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.14 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Helicase TsaE PF02367.17 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.15 12.1 0.0 0.3 11.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE CbiA PF01656.23 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.17 12.0 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain UvrD-helicase PF00580.21 NODE_40353_length_514_cov_3.271399_g32882_i0reverse_frame_3 - 0.33 10.4 1.1 0.72 9.3 0.1 1.8 1 1 0 2 2 2 0 UvrD/REP helicase N-terminal domain ABC_tran PF00005.27 NODE_40350_length_514_cov_3.546973_g32879_i0forward_frame_2 - 8.1e-14 52.3 0.0 8.2e-12 45.8 0.0 2.0 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 NODE_40350_length_514_cov_3.546973_g32879_i0forward_frame_2 - 8.1e-08 32.7 0.1 1.8e-07 31.6 0.1 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 NODE_40350_length_514_cov_3.546973_g32879_i0forward_frame_2 - 2e-06 27.9 0.0 2.3e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system UQ_con PF00179.26 NODE_40347_length_514_cov_16.033403_g32877_i0reverse_frame_2 - 8.5e-22 77.3 1.2 1.1e-21 77.0 1.2 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 NODE_40347_length_514_cov_16.033403_g32877_i0reverse_frame_2 - 0.032 14.5 2.5 0.054 13.8 2.5 1.5 1 1 0 1 1 1 0 RWD domain UEV PF05743.13 NODE_40347_length_514_cov_16.033403_g32877_i0reverse_frame_2 - 0.19 11.6 1.8 0.4 10.5 1.8 1.7 1 1 0 1 1 1 0 UEV domain INSIG PF07281.12 NODE_40341_length_514_cov_59.407098_g32871_i0forward_frame_3 - 0.057 13.1 0.5 0.13 11.9 0.5 1.5 1 1 1 2 2 2 0 Insulin-induced protein (INSIG) Peptidase_M24_C PF16188.5 NODE_40340_length_514_cov_67.607516_g32870_i0forward_frame_2 - 1e-18 67.1 0.0 1.4e-18 66.7 0.0 1.2 1 0 0 1 1 1 1 C-terminal region of peptidase_M24 Peptidase_M24 PF00557.24 NODE_40340_length_514_cov_67.607516_g32870_i0forward_frame_2 - 1.7e-07 31.2 0.0 6.4e-07 29.3 0.0 1.7 2 0 0 2 2 2 1 Metallopeptidase family M24 DUF724 PF05266.14 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.0045 16.8 11.2 0.0045 16.8 11.2 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF724) MAD PF05557.13 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.074 11.4 25.8 0.09 11.1 25.8 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein GAS PF13851.6 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.099 12.0 29.0 0.0094 15.3 22.2 1.9 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DIT1_PvcA PF05141.12 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.27 10.6 7.3 0.22 11.0 6.2 1.4 1 1 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein UvrD-helicase PF00580.21 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.35 10.3 15.5 0.41 10.1 15.5 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain Atg14 PF10186.9 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.53 9.3 22.1 0.69 8.9 22.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CALCOCO1 PF07888.11 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.64 8.8 22.5 0.75 8.6 22.5 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Lebercilin PF15619.6 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.69 9.5 32.4 0.048 13.3 24.9 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Swi5 PF07061.11 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.71 10.0 19.7 0.39 10.8 7.6 2.9 2 1 0 2 2 2 0 Swi5 Exonuc_VII_L PF02601.15 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 2.3 7.7 15.8 2.7 7.5 15.8 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit FlaC_arch PF05377.11 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 2.3 8.6 19.7 0.34 11.3 4.7 3.5 2 1 2 4 4 4 0 Flagella accessory protein C (FlaC) ADIP PF11559.8 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 2.8 8.0 30.2 0.19 11.8 22.7 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding FapA PF03961.13 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 3 6.4 19.1 4.3 5.8 18.7 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A TEX13 PF15186.6 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 3 7.5 12.0 0.88 9.2 8.2 1.9 1 1 1 2 2 2 0 Testis-expressed sequence 13 protein family PKcGMP_CC PF16808.5 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 3.2 7.7 12.9 5.7 6.9 1.1 3.5 1 1 2 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_TATA_bd PF12325.8 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 4 7.7 24.3 0.13 12.5 2.3 2.7 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF16 PF01519.16 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 4.6 7.8 21.5 0.46 11.0 10.9 2.6 1 1 1 2 2 2 0 Protein of unknown function DUF16 kleA_kleC PF17383.2 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 4.7 7.6 7.1 5.2 7.5 1.4 3.0 1 1 2 3 3 3 0 Uncharacterized KorC regulated protein A Connexin40_C PF16791.5 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 4.8 8.5 8.7 1.1 10.6 4.7 2.0 1 1 0 1 1 1 0 Connexin 40 C-terminal domain HAUS-augmin3 PF14932.6 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 5.9 6.4 22.6 8 6.0 20.2 2.0 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 FAM76 PF16046.5 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 9.8 5.4 20.6 3.1 7.1 17.1 1.4 1 1 0 1 1 1 0 FAM76 protein AAA_7 PF12775.7 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 8.3e-26 90.6 0.2 1.2e-25 90.1 0.2 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region Dynein_AAA_lid PF17852.1 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 4.3e-15 55.9 0.1 8.3e-15 55.0 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain RsgA_GTPase PF03193.16 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 8.2e-05 22.6 0.0 9.6e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.00014 22.3 0.3 0.0018 18.7 0.1 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.00029 21.1 0.0 0.00058 20.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0019 18.2 0.0 0.003 17.5 0.0 1.3 1 0 0 1 1 1 1 NACHT domain Sigma54_activat PF00158.26 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.003 17.3 0.0 0.0042 16.8 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_25 PF13481.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0034 17.0 0.0 0.0043 16.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0042 17.1 0.0 0.0063 16.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) TsaE PF02367.17 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0053 16.8 0.0 0.0091 16.0 0.0 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0054 17.2 0.0 0.0086 16.5 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0061 15.8 0.0 0.0083 15.3 0.0 1.2 1 0 0 1 1 1 1 NB-ARC domain T2SSE PF00437.20 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0075 15.4 0.0 0.01 14.9 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein Pox_A32 PF04665.12 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0086 15.6 0.1 0.019 14.5 0.1 1.5 1 0 0 1 1 1 1 Poxvirus A32 protein ABC_tran PF00005.27 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.01 16.3 0.3 0.096 13.2 0.1 2.1 2 0 0 2 2 2 0 ABC transporter FtsK_SpoIIIE PF01580.18 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.013 14.9 0.0 0.017 14.4 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family Roc PF08477.13 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.013 15.7 0.7 0.029 14.6 0.1 1.9 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.018 15.1 0.1 0.041 14.0 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase IstB_IS21 PF01695.17 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.023 14.4 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_23 PF13476.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.024 15.1 1.1 0.053 14.0 0.2 1.8 1 1 1 2 2 2 0 AAA domain GTP_EFTU PF00009.27 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.03 13.9 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_33 PF13671.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.039 14.1 0.1 0.13 12.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain SRPRB PF09439.10 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.059 12.8 0.4 0.48 9.8 0.2 2.3 1 1 2 3 3 3 0 Signal recognition particle receptor beta subunit MCM PF00493.23 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.066 12.3 0.0 0.091 11.8 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AIG1 PF04548.16 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.067 12.5 0.1 0.1 11.9 0.1 1.3 1 0 0 1 1 1 0 AIG1 family ATPase_2 PF01637.18 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.071 13.0 0.0 0.13 12.2 0.0 1.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea ResIII PF04851.15 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.075 13.0 0.2 0.13 12.2 0.2 1.6 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_29 PF13555.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.088 12.6 0.1 0.14 11.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF240 PF03086.14 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.11 12.4 0.5 0.27 11.1 0.2 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF240) KH_4 PF13083.6 NODE_40308_length_514_cov_358.567850_g32839_i0forward_frame_2 - 0.06 13.2 3.4 16 5.4 0.1 3.1 3 0 0 3 3 3 0 KH domain Hemopexin PF00045.19 NODE_40291_length_515_cov_2.847917_g32824_i0reverse_frame_3 - 0.065 13.2 0.5 0.12 12.3 0.5 1.4 1 0 0 1 1 1 0 Hemopexin WAK_assoc PF14380.6 NODE_40291_length_515_cov_2.847917_g32824_i0reverse_frame_2 - 0.11 13.3 0.9 0.17 12.7 0.9 1.3 1 0 0 1 1 1 0 Wall-associated receptor kinase C-terminal DUF641 PF04859.12 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.0054 17.1 11.4 1.4 9.3 9.0 2.2 2 0 0 2 2 2 2 Plant protein of unknown function (DUF641) DUF5082 PF16888.5 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.03 14.6 17.1 0.04 14.2 0.3 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) ATG16 PF08614.11 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.7 10.1 15.0 0.36 11.0 12.0 1.8 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF4140 PF13600.6 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.74 10.3 9.0 47 4.5 9.0 2.1 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Pox_A_type_inc PF04508.12 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.78 9.7 7.3 0.13 12.1 1.7 2.7 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat DUF4407 PF14362.6 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 2.1 7.6 9.9 2.6 7.3 9.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SurA_N_2 PF13623.6 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 7.6 6.4 10.1 3.2 7.6 3.9 2.2 1 1 1 2 2 2 0 SurA N-terminal domain HNHc_6 PF16784.5 NODE_40282_length_515_cov_61.370833_g32815_i0forward_frame_3 - 0.22 11.1 3.7 0.22 11.1 0.2 2.0 1 1 1 2 2 2 0 Putative HNHc nuclease Fumarate_red_C PF02300.17 NODE_40276_length_515_cov_78.285417_g32809_i0reverse_frame_3 - 0.26 11.3 3.4 5.2 7.2 0.4 2.7 2 1 1 3 3 3 0 Fumarate reductase subunit C Ank_5 PF13857.6 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 2.8e-12 46.6 0.1 3.8e-10 39.8 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 1e-08 35.2 0.2 2.5e-06 27.7 0.0 3.2 3 1 0 3 3 3 1 Ankyrin repeat Ank_4 PF13637.6 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 2.1e-08 34.6 0.0 0.00013 22.4 0.0 3.1 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 1.5e-06 28.7 0.0 0.0002 21.9 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 0.0012 19.1 0.0 0.0075 16.7 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat DUF2805 PF10985.8 NODE_40259_length_515_cov_141.670833_g32792_i0forward_frame_2 - 0.6 10.5 0.1 0.6 10.5 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2805) Rhodanese PF00581.20 NODE_40246_length_515_cov_290.102083_g32780_i0reverse_frame_3 - 3.7e-07 30.6 0.0 5.4e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Rhodanese-like domain Cas6_N PF17952.1 NODE_40243_length_515_cov_354.806250_g32777_i0reverse_frame_3 - 0.12 12.7 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Cas6 N-terminal domain YWFCY PF14293.6 NODE_40229_length_516_cov_2.920998_g32764_i0forward_frame_3 - 0.6 10.5 5.6 0.44 10.9 3.3 2.1 1 1 1 2 2 2 0 YWFCY protein Cytochrom_NNT PF03264.14 NODE_40225_length_516_cov_3.099792_g32760_i0reverse_frame_2 - 0.12 12.0 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region DUF3826 PF12875.7 NODE_40222_length_516_cov_3.646570_g32757_i0reverse_frame_3 - 0.063 13.4 4.1 0.083 13.0 4.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3826) DUF2070 PF09843.9 NODE_40222_length_516_cov_3.646570_g32757_i0forward_frame_3 - 0.57 8.4 10.5 0.6 8.3 10.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Bax1-I PF01027.20 NODE_40221_length_516_cov_28.027027_g32756_i0forward_frame_2 - 6.1e-20 71.9 20.3 6.8e-20 71.8 20.3 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF4231 PF14015.6 NODE_40221_length_516_cov_28.027027_g32756_i0forward_frame_2 - 4.3 7.8 6.3 8.7 6.9 1.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) P34-Arc PF04045.14 NODE_40219_length_516_cov_51.719335_g32754_i0reverse_frame_3 - 0.024 14.4 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 Arp2/3 complex, 34 kD subunit p34-Arc DUF5095 PF17016.5 NODE_40219_length_516_cov_51.719335_g32754_i0forward_frame_3 - 0.016 14.9 0.2 0.016 14.9 0.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5095) DUF261 PF03196.13 NODE_40217_length_516_cov_71.528067_g32752_i0forward_frame_2 - 0.15 12.2 5.1 0.18 11.9 3.9 1.8 1 1 1 2 2 2 0 Protein of unknown function, DUF261 MelC1 PF06236.11 NODE_40215_length_516_cov_80.627859_g32750_i0forward_frame_2 - 0.12 12.5 0.5 0.32 11.1 0.0 1.9 2 0 0 2 2 2 0 Tyrosinase co-factor MelC1 Ank_4 PF13637.6 NODE_40206_length_516_cov_102.174636_g32742_i0reverse_frame_2 - 3.6e-18 65.7 2.8 3e-11 43.6 0.5 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_40206_length_516_cov_102.174636_g32742_i0reverse_frame_2 - 9.8e-15 54.9 0.5 1.4e-13 51.3 0.4 2.1 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_40206_length_516_cov_102.174636_g32742_i0reverse_frame_2 - 3.7e-12 46.1 2.9 9.2e-06 25.9 0.1 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 NODE_40206_length_516_cov_102.174636_g32742_i0reverse_frame_2 - 1e-11 44.8 3.5 4.4e-06 26.9 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_40206_length_516_cov_102.174636_g32742_i0reverse_frame_2 - 2.4e-10 39.7 1.1 0.0017 18.7 0.1 3.7 4 0 0 4 4 4 2 Ankyrin repeat DUF4637 PF15470.6 NODE_40200_length_516_cov_161.185031_g32737_i0reverse_frame_2 - 0.062 13.0 1.9 0.09 12.5 1.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Cys_rich_FGFR PF00839.17 NODE_40200_length_516_cov_161.185031_g32737_i0forward_frame_2 - 0.075 13.2 0.0 0.19 12.0 0.0 1.8 1 1 0 1 1 1 0 Cysteine rich repeat DUF1826 PF08856.11 NODE_40198_length_516_cov_163.582121_g32735_i0reverse_frame_2 - 9.9e-08 32.1 0.0 1.3e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1826) zf-trcl PF13451.6 NODE_40194_length_516_cov_187.457380_g32731_i0reverse_frame_2 - 0.41 10.6 5.1 0.39 10.6 2.1 2.5 1 1 1 2 2 2 0 Probable zinc-ribbon domain Ric8 PF10165.9 NODE_40194_length_516_cov_187.457380_g32731_i0forward_frame_2 - 0.031 13.3 0.0 0.032 13.3 0.0 1.1 1 0 0 1 1 1 0 Guanine nucleotide exchange factor synembryn RR_TM4-6 PF06459.12 NODE_40187_length_516_cov_416.178794_g32724_i0reverse_frame_3 - 0.36 10.6 5.3 0.45 10.3 5.3 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 AAA_lid_4 PF17864.1 NODE_40183_length_516_cov_5414.189189_g32721_i0reverse_frame_2 - 0.0076 16.0 1.3 0.0085 15.8 0.4 1.5 2 0 0 2 2 2 1 RuvB AAA lid domain Phage_holin_3_5 PF16085.5 ORF99905 - 0.21 11.7 1.4 0.27 11.4 0.2 1.8 2 0 0 2 2 2 0 Bacteriophage holin Hol, superfamily III DUF3484 PF11983.8 ORF98788 - 0.00067 20.7 1.9 0.0015 19.6 1.9 1.6 1 0 0 1 1 1 1 Membrane-attachment and polymerisation-promoting switch Transpeptidase PF00905.22 ORF98788 - 0.00091 18.5 0.6 0.0015 17.8 0.6 1.4 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain BTB PF00651.31 ORF97201 - 8.4e-27 93.6 5.5 2.5e-26 92.1 2.1 2.1 1 1 1 2 2 2 1 BTB/POZ domain BACK PF07707.15 ORF97201 - 1.1e-07 31.8 0.5 4.6e-07 29.9 0.1 2.1 2 0 0 2 2 2 1 BTB And C-terminal Kelch Citrate_synt PF00285.21 ORF95233 - 2.4e-08 33.4 0.0 4.4e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain CSD PF00313.22 ORF94836 - 5.2e-05 23.0 0.0 9.2e-05 22.2 0.0 1.5 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain DUF1415 PF07209.12 ORF94470 - 0.018 14.8 0.0 0.34 10.7 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1415) Mannitol_dh_C PF08125.13 ORF91274 - 1.9e-43 148.7 0.0 2.2e-43 148.5 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain TMEM144 PF07857.12 ORF91150 - 0.024 13.6 2.7 0.058 12.3 2.6 1.7 1 1 0 1 1 1 0 Transmembrane family, TMEM144 of transporters DUF3671 PF12420.8 ORF91150 - 3.8 7.6 11.6 0.27 11.3 0.3 2.6 1 1 2 3 3 3 0 Protein of unknown function Peptidase_M14 PF00246.24 ORF89991 - 4.7e-27 95.6 0.5 5.2e-27 95.4 0.5 1.0 1 0 0 1 1 1 1 Zinc carboxypeptidase BPD_transp_1 PF00528.22 ORF8936 - 7.7e-22 77.9 13.0 8.9e-22 77.7 13.0 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component HEAT_PBS PF03130.16 ORF8936 - 0.5 11.2 4.2 3.9 8.4 0.3 3.1 3 1 0 3 3 3 0 PBS lyase HEAT-like repeat HTH_IclR PF09339.10 ORF8880 - 0.48 10.3 2.3 2 8.3 0.1 3.0 4 0 0 4 4 4 0 IclR helix-turn-helix domain PSII_Pbs31 PF18240.1 ORF88073 - 1.7e-07 31.6 0.2 4.2e-07 30.3 0.0 1.7 2 0 0 2 2 2 1 Photosystem II Psb31 protein Cytochrom_C_2 PF01322.20 ORF88073 - 0.11 13.4 0.2 0.19 12.6 0.2 1.4 1 0 0 1 1 1 0 Cytochrome C' CytB6-F_Fe-S PF08802.10 ORF88073 - 0.18 11.9 4.7 7.1 6.8 0.2 2.3 1 1 1 2 2 2 0 Cytochrome B6-F complex Fe-S subunit DUF5539 PF17693.1 ORF87644 - 0.82 9.3 12.2 0.99 9.0 12.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5539) DUF3828 PF12883.7 ORF87340 - 5.2e-28 97.9 0.0 6.2e-28 97.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3828) AAA_5 PF07728.14 ORF87340 - 0.17 11.9 0.1 0.8 9.7 0.0 1.9 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) Na_Pi_cotrans PF02690.15 ORF8696 - 0.089 12.9 0.4 0.13 12.3 0.4 1.3 1 0 0 1 1 1 0 Na+/Pi-cotransporter Pro_isomerase PF00160.21 ORF86551 - 5.1e-49 166.6 0.1 5.7e-49 166.4 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DER1 PF04511.15 ORF85726 - 5.1e-23 82.0 4.9 5.9e-23 81.8 4.9 1.0 1 0 0 1 1 1 1 Der1-like family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks124.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks124.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks124.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks124.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NKAIN PF05640.14 ORF85087 - 0.044 13.0 0.6 0.058 12.6 0.6 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein Pro_isomerase PF00160.21 ORF85053 - 5.1e-49 166.6 0.1 5.7e-49 166.4 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Calpain_III PF01067.22 ORF85041 - 4.1e-08 33.6 0.0 6.9e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Calpain large subunit, domain III PDZ PF00595.24 ORF84161 - 3.6e-08 33.6 0.4 0.0071 16.7 0.1 2.7 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF84161 - 6.6e-07 29.6 0.1 0.0012 19.2 0.0 2.5 2 1 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF84161 - 1.5e-05 24.7 0.0 0.085 12.7 0.0 2.4 2 0 0 2 2 2 2 PDZ domain RseC_MucC PF04246.12 ORF83998 - 1.1 9.2 3.9 0.46 10.4 0.8 1.8 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DHHC PF01529.20 ORF83998 - 3.9 7.6 9.6 0.81 9.8 3.1 2.2 2 0 0 2 2 2 0 DHHC palmitoyltransferase TBX PF12598.8 ORF82481 - 0.016 16.0 0.4 0.027 15.3 0.4 1.4 1 0 0 1 1 1 0 T-box transcription factor zf-RING_2 PF13639.6 ORF82467 - 1.4e-08 34.9 12.3 3.7e-07 30.4 12.3 2.5 1 1 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF82467 - 9.2e-08 32.3 7.8 9.2e-08 32.3 7.8 2.1 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF82467 - 5.8e-07 29.4 2.8 2.6e-06 27.4 2.8 2.0 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF82467 - 2.5e-06 27.1 6.4 0.00064 19.4 2.0 2.5 2 0 0 2 2 2 2 RING-like zinc finger zf-C3HC4 PF00097.25 ORF82467 - 2.7e-05 24.0 5.1 8.3e-05 22.4 4.7 2.1 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF82467 - 0.00022 21.0 5.0 0.00022 21.0 5.0 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF82467 - 0.00026 20.6 4.3 0.00026 20.6 4.3 2.0 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF82467 - 0.0024 17.8 9.4 0.013 15.4 9.3 2.3 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF82467 - 0.056 13.6 3.0 0.056 13.6 3.0 2.5 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF82467 - 0.32 10.9 13.4 0.35 10.8 5.6 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF82467 - 2.3 8.4 11.2 6 7.1 8.2 2.9 2 1 0 2 2 2 0 RING-variant domain Prok-RING_4 PF14447.6 ORF82467 - 2.8 7.9 11.0 0.41 10.6 5.0 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF82467 - 6.8 6.8 11.4 1.2 9.2 6.5 2.2 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger POB3_N PF17292.2 ORF81036 - 0.078 13.4 0.2 0.15 12.5 0.2 1.5 1 1 0 1 1 1 0 POB3-like N-terminal PH domain AMIN PF11741.8 ORF81036 - 0.096 12.8 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 AMIN domain adh_short PF00106.25 ORF80259 - 2.4e-12 46.7 0.0 3.1e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF80259 - 1.4e-08 34.6 0.0 1.8e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Polysacc_synt PF01943.17 ORF79427 - 0.0048 16.3 0.7 0.0068 15.8 0.7 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Adipogenin PF15202.6 ORF79427 - 0.009 16.0 0.3 0.02 14.9 0.3 1.5 1 0 0 1 1 1 1 Adipogenin ANAPC1 PF12859.7 ORF79427 - 0.18 12.3 0.0 0.26 11.8 0.0 1.4 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 1 GtrA PF04138.14 ORF79427 - 0.98 9.7 6.5 0.17 12.1 2.9 1.5 2 0 0 2 2 2 0 GtrA-like protein AtpR PF12966.7 ORF78338 - 3.3 8.2 8.5 2.2 8.8 5.7 1.8 1 1 1 2 2 2 0 N-ATPase, AtpR subunit PSII_Pbs31 PF18240.1 ORF77460 - 3.5e-07 30.5 0.0 1.7e-06 28.4 0.0 2.1 2 0 0 2 2 2 1 Photosystem II Psb31 protein UCR_Fe-S_N PF10399.9 ORF77460 - 0.011 15.1 0.7 0.018 14.4 0.7 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 ORF77460 - 0.18 11.7 0.0 0.18 11.7 0.0 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence DUF1090 PF06476.12 ORF77460 - 0.35 11.0 1.8 8.3 6.6 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1090) VSG_B PF13206.6 ORF77298 - 0.69 9.1 7.2 1 8.5 7.2 1.4 1 0 0 1 1 1 0 Trypanosomal VSG domain DUF5539 PF17693.1 ORF73591 - 0.82 9.3 12.2 0.99 9.0 12.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5539) Inhibitor_I29 PF08246.12 ORF71881 - 9.2e-13 48.4 7.8 1.8e-12 47.5 7.8 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF71881 - 0.0031 17.6 0.1 0.0076 16.4 0.1 1.7 1 0 0 1 1 1 1 Papain family cysteine protease Ras PF00071.22 ORF71652 - 3.6e-54 182.7 0.4 4e-54 182.6 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF71652 - 6.4e-32 110.3 0.2 8.8e-32 109.9 0.2 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF71652 - 1.6e-09 37.5 0.1 1.7e-09 37.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF71652 - 4.8e-09 35.9 0.0 5.6e-09 35.7 0.0 1.0 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF71652 - 0.00026 20.6 0.6 0.0012 18.4 0.6 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain NTPase_1 PF03266.15 ORF71652 - 0.0015 18.5 0.2 0.002 18.1 0.2 1.3 1 0 0 1 1 1 1 NTPase RsgA_GTPase PF03193.16 ORF71652 - 0.0034 17.3 0.3 0.34 10.8 0.0 2.3 2 1 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF71652 - 0.004 17.2 0.1 0.0061 16.6 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF71652 - 0.0075 15.8 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_24 PF13479.6 ORF71652 - 0.011 15.5 0.1 0.016 15.0 0.1 1.3 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF71652 - 0.054 13.9 0.0 0.085 13.2 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain TniB PF05621.11 ORF71652 - 0.067 12.6 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein AAA_22 PF13401.6 ORF71652 - 0.11 12.8 0.1 0.18 12.1 0.1 1.4 1 0 0 1 1 1 0 AAA domain CAP_assoc_N PF14504.6 ORF70936 - 0.026 14.3 0.8 0.063 13.0 0.8 1.6 1 0 0 1 1 1 0 CAP-associated N-terminal Lipid_bd PF12888.7 ORF70936 - 0.1 13.0 1.7 0.18 12.3 0.2 1.9 2 0 0 2 2 2 0 Lipid-binding putative hydrolase HypA PF01155.19 ORF69924 - 0.28 11.2 1.5 0.38 10.8 1.5 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CN_hydrolase PF00795.22 ORF68843 - 0.00045 19.6 0.0 0.0006 19.2 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase PsaA_PsaB PF00223.19 ORF67473 - 1.5e-18 66.5 10.6 1.3e-08 33.6 2.4 3.0 1 1 1 2 2 2 2 Photosystem I psaA/psaB protein DUF2976 PF11190.8 ORF67473 - 0.08 12.7 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) Q_salvage PF10343.9 ORF67030 - 4.9e-25 88.7 0.0 5.5e-25 88.5 0.0 1.0 1 0 0 1 1 1 1 Potential Queuosine, Q, salvage protein family DUF641 PF04859.12 ORF66952 - 0.011 16.1 3.0 0.014 15.7 3.0 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) FAM183 PF14886.6 ORF66952 - 0.079 13.7 3.3 0.18 12.5 3.3 1.7 1 1 0 1 1 1 0 FAM183A and FAM183B related SlyX PF04102.12 ORF66952 - 0.17 12.6 2.6 0.2 12.3 1.5 1.7 1 1 1 2 2 2 0 SlyX DUF4407 PF14362.6 ORF66952 - 0.23 10.8 4.9 0.28 10.5 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 ORF66952 - 0.75 9.6 7.8 0.84 9.5 3.7 2.1 1 1 1 2 2 2 0 Septum formation initiator DUF724 PF05266.14 ORF66952 - 1.2 9.0 10.6 1.9 8.3 10.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ANAPC_CDC26 PF10471.9 ORF66952 - 3.2 8.6 6.8 1.5 9.7 2.1 2.2 1 1 1 2 2 2 0 Anaphase-promoting complex APC subunit CDC26 ABC_membrane PF00664.23 ORF66620 - 2.5e-10 40.5 4.0 4.1e-10 39.8 4.0 1.3 1 1 0 1 1 1 1 ABC transporter transmembrane region PhoLip_ATPase_C PF16212.5 ORF66620 - 0.0086 15.9 3.3 0.011 15.6 3.3 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal DUF3007 PF11460.8 ORF66620 - 0.014 15.6 0.1 0.02 15.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) DUF4282 PF14110.6 ORF66620 - 0.036 14.8 3.4 0.31 11.8 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) ECF-ribofla_trS PF07155.12 ORF66620 - 0.037 14.0 2.3 0.05 13.6 2.3 1.1 1 0 0 1 1 1 0 ECF-type riboflavin transporter, S component DUF2304 PF10066.9 ORF66620 - 0.45 10.8 5.3 7 6.9 1.7 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Na_Pi_cotrans PF02690.15 ORF66392 - 0.088 12.9 0.4 0.13 12.3 0.4 1.3 1 0 0 1 1 1 0 Na+/Pi-cotransporter Ank_2 PF12796.7 ORF66331 - 7e-27 93.8 0.1 7e-16 58.6 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF66331 - 1.4e-22 79.4 0.2 4.4e-08 33.2 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF66331 - 4.1e-20 71.3 1.9 6.5e-07 29.5 0.3 4.3 3 1 1 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF66331 - 1.3e-19 70.3 2.3 1.4e-09 38.3 0.1 3.1 1 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF66331 - 5.9e-16 57.0 0.0 0.00018 21.7 0.0 4.6 5 0 0 5 5 5 3 Ankyrin repeat Peripla_BP_1 PF00532.21 ORF65739 - 3.5e-48 164.4 0.0 3.9e-48 164.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF65739 - 1.8e-06 27.7 0.1 2.1e-06 27.5 0.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain DDDD PF10161.9 ORF64947 - 0.12 12.1 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Putative mitochondrial precursor protein Kinocilin PF15033.6 ORF64101 - 0.078 12.6 0.2 4.2 7.0 0.0 2.1 2 0 0 2 2 2 0 Kinocilin protein SHIPPO-rpt PF07004.12 ORF63654 - 9.1e-08 32.7 5.1 0.011 16.7 0.0 3.5 3 0 0 3 3 3 3 Sperm-tail PG-rich repeat TRAP_alpha PF03896.16 ORF63226 - 0.028 13.6 1.7 0.035 13.3 1.7 1.2 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit NOA36 PF06524.12 ORF63226 - 0.46 9.8 6.3 0.65 9.3 6.3 1.2 1 0 0 1 1 1 0 NOA36 protein ALMT PF11744.8 ORF63226 - 0.75 8.6 3.4 0.81 8.4 3.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter CENP-B_dimeris PF09026.10 ORF63226 - 2.7 8.4 9.3 1.8 9.0 4.6 2.3 2 0 0 2 2 2 0 Centromere protein B dimerisation domain OPA3 PF07047.12 ORF61591 - 1.5e-17 63.5 0.1 3.9e-17 62.2 0.0 1.6 1 1 1 2 2 2 1 Optic atrophy 3 protein (OPA3) HMMR_N PF15905.5 ORF61591 - 0.012 15.1 3.1 0.015 14.8 2.7 1.4 2 0 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal Prefoldin_2 PF01920.20 ORF61591 - 0.013 15.5 1.9 0.017 15.1 1.3 1.6 1 1 0 1 1 1 0 Prefoldin subunit IZUMO PF15005.6 ORF61591 - 0.015 15.9 0.2 0.027 15.0 0.2 1.4 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated SlyX PF04102.12 ORF61591 - 0.037 14.7 0.5 0.063 13.9 0.5 1.4 1 0 0 1 1 1 0 SlyX Fib_alpha PF08702.10 ORF61591 - 0.33 11.1 3.2 0.58 10.3 3.2 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family PAF-AH_p_II PF03403.13 ORF61138 - 1.5e-11 43.5 0.4 1.8e-11 43.2 0.4 1.1 1 0 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II Abhydrolase_1 PF00561.20 ORF61138 - 1.2e-05 25.1 0.0 1.4e-05 24.9 0.0 1.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold Esterase PF00756.20 ORF61138 - 0.00012 21.8 0.0 0.00021 21.0 0.0 1.4 1 1 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 ORF61138 - 0.0012 18.2 0.0 0.0013 18.0 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF61138 - 0.0094 15.4 0.0 0.018 14.6 0.0 1.5 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF61138 - 0.013 16.1 0.0 0.016 15.8 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family LIDHydrolase PF10230.9 ORF61138 - 0.024 14.2 0.0 0.03 13.9 0.0 1.4 1 1 0 1 1 1 0 Lipid-droplet associated hydrolase PhnJ PF06007.11 ORF61138 - 0.029 13.4 0.1 0.036 13.1 0.1 1.1 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnJ PGAP1 PF07819.13 ORF61138 - 0.074 12.8 0.0 0.31 10.7 0.0 1.8 2 0 0 2 2 2 0 PGAP1-like protein Thioesterase PF00975.20 ORF61138 - 0.16 12.1 0.0 0.35 11.0 0.0 1.5 2 0 0 2 2 2 0 Thioesterase domain RCC1_2 PF13540.6 ORF59568 - 2.2e-09 36.8 6.1 0.066 13.0 0.1 4.3 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF59568 - 0.0025 18.1 0.0 1.6 9.1 0.0 2.5 2 1 1 3 3 3 2 TFIIH p62 subunit, N-terminal domain DUF155 PF02582.14 ORF59568 - 0.025 14.7 0.0 24 5.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 TruB_C PF09142.11 ORF59568 - 0.03 14.1 3.8 0.1 12.4 0.0 3.0 3 1 0 3 3 3 0 tRNA Pseudouridine synthase II, C terminal PheRS_DBD2 PF18554.1 ORF59568 - 0.6 10.1 4.5 8.7 6.4 0.3 2.5 2 0 0 2 2 2 0 PheRS DNA binding domain 2 YojJ PF10372.9 ORF58346 - 0.014 15.5 4.1 0.12 12.5 0.1 2.5 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Cnn_1N PF07989.11 ORF58346 - 0.038 14.2 2.2 0.038 14.2 2.2 3.2 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 CdvA PF18822.1 ORF58346 - 0.046 13.5 14.8 0.33 10.8 1.1 2.4 2 1 0 2 2 2 0 CdvA-like coiled-coil domain Peptidase_M75 PF09375.10 ORF58346 - 0.069 12.6 0.6 0.081 12.4 0.6 1.1 1 0 0 1 1 1 0 Imelysin CHDCT2 PF08074.11 ORF58346 - 0.11 12.6 5.5 0.28 11.3 5.5 1.7 1 1 0 1 1 1 0 CHDCT2 (NUC038) domain SseC PF04888.12 ORF58346 - 0.13 11.8 0.3 0.13 11.8 0.3 1.9 2 0 0 2 2 2 0 Secretion system effector C (SseC) like family SOGA PF11365.8 ORF58346 - 2.6 9.2 11.7 0.9 10.7 5.2 2.8 1 1 1 2 2 2 0 Protein SOGA Cep57_CLD_2 PF14197.6 ORF58346 - 3.3 7.9 17.2 1.6 8.9 8.1 2.8 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 Ly49 PF08391.10 ORF58346 - 8.4 6.8 9.8 2.4 8.6 5.9 2.1 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region bZIP_1 PF00170.21 ORF58346 - 9.4 6.4 18.7 0.64 10.2 0.4 3.6 2 1 2 4 4 4 0 bZIP transcription factor Ku_C PF03730.14 ORF58346 - 10 6.9 9.3 3.9 8.2 1.6 2.5 1 1 1 2 2 2 0 Ku70/Ku80 C-terminal arm CRAL_TRIO_N PF03765.15 ORF57400 - 0.034 14.3 2.6 5.6 7.2 0.0 3.1 3 0 0 3 3 3 0 CRAL/TRIO, N-terminal domain Elongin_A PF06881.11 ORF57400 - 0.19 12.3 6.6 0.34 11.5 6.6 1.4 1 0 0 1 1 1 0 RNA polymerase II transcription factor SIII (Elongin) subunit A Pkinase PF00069.25 ORF5643 - 4e-25 88.7 0.1 4.6e-25 88.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF5643 - 5.9e-09 35.6 0.0 8.5e-09 35.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase BHD_1 PF10403.9 ORF56156 - 0.22 11.4 2.0 0.25 11.2 0.5 1.8 2 0 0 2 2 2 0 Rad4 beta-hairpin domain 1 LysR_substrate PF03466.20 ORF54463 - 2e-15 56.7 0.0 2.4e-15 56.5 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain VSG_B PF13206.6 ORF53738 - 0.69 9.1 7.2 1 8.5 7.2 1.4 1 0 0 1 1 1 0 Trypanosomal VSG domain MORN PF02493.20 ORF5172 - 8.3e-08 31.7 14.8 3e-06 26.8 3.2 4.6 4 1 0 4 4 4 4 MORN repeat BTB PF00651.31 ORF49437 - 3e-05 24.2 0.1 7.9e-05 22.9 0.1 1.8 1 1 0 1 1 1 1 BTB/POZ domain LRV PF01816.17 ORF49437 - 1.7 9.2 4.0 0.53 10.8 0.4 2.1 2 0 0 2 2 2 0 Leucine rich repeat variant DUF5585 PF17823.1 ORF48417 - 0.53 9.2 37.0 0.66 8.9 37.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5585) AtpR PF12966.7 ORF47080 - 3.3 8.2 8.5 2.2 8.8 5.7 1.8 1 1 1 2 2 2 0 N-ATPase, AtpR subunit DEAD PF00270.29 ORF47077 - 3.8e-17 62.6 0.0 5.6e-17 62.1 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase CMS1 PF14617.6 ORF47077 - 0.032 13.6 0.4 0.075 12.4 0.0 1.7 2 0 0 2 2 2 0 U3-containing 90S pre-ribosomal complex subunit Guanylate_kin PF00625.21 ORF46204 - 2.3e-45 154.5 0.0 2.6e-45 154.3 0.0 1.0 1 0 0 1 1 1 1 Guanylate kinase HEAT_2 PF13646.6 ORF46144 - 1.9e-13 50.6 13.0 1.2e-08 35.2 4.5 2.3 2 0 0 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF46144 - 1.5e-08 34.2 14.4 0.011 15.9 0.2 5.0 5 0 0 5 5 5 3 HEAT repeat Adaptin_N PF01602.20 ORF46144 - 0.00098 17.8 0.2 0.0012 17.5 0.2 1.2 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF46144 - 0.0014 18.7 0.2 0.026 14.6 0.0 2.6 1 1 1 2 2 2 1 non-SMC mitotic condensation complex subunit 1 HEAT_PBS PF03130.16 ORF46144 - 0.21 12.4 14.6 0.67 10.8 0.3 4.5 4 1 0 4 4 4 0 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 ORF46144 - 0.37 11.4 16.0 2.1 9.0 2.2 4.1 2 2 2 4 4 4 0 HEAT-like repeat HSCB_C PF07743.13 ORF41468 - 3.6e-18 65.8 12.0 1e-17 64.4 9.0 2.2 2 0 0 2 2 2 1 HSCB C-terminal oligomerisation domain DnaJ PF00226.31 ORF41468 - 1.3e-05 25.2 0.0 2.5e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 DnaJ domain DUF480 PF04337.12 ORF41468 - 0.013 15.6 0.0 0.022 14.8 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function, DUF480 SMC_N PF02463.19 ORF41468 - 0.2 11.0 0.5 0.29 10.5 0.5 1.3 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain UAA PF08449.11 ORF40036 - 2.1e-22 79.7 10.2 2.3e-22 79.6 10.2 1.0 1 0 0 1 1 1 1 UAA transporter family CobD_Cbib PF03186.13 ORF40036 - 1 8.5 5.1 2.2 7.4 5.1 1.5 1 1 1 2 2 2 0 CobD/Cbib protein CPDase PF07823.11 ORF3991 - 0.0061 16.3 0.0 0.014 15.1 0.0 1.6 1 1 0 1 1 1 1 Cyclic phosphodiesterase-like protein Cep57_CLD_2 PF14197.6 ORF3991 - 0.0069 16.5 8.6 0.11 12.7 2.7 2.9 2 0 0 2 2 2 2 Centrosome localisation domain of PPC89 Fez1 PF06818.15 ORF3991 - 0.026 15.0 6.7 0.046 14.2 6.5 1.4 1 1 1 2 2 2 0 Fez1 Bacillus_HBL PF05791.11 ORF3991 - 0.061 13.2 0.4 0.65 9.8 0.1 2.0 2 0 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) C_Hendra PF16821.5 ORF3991 - 0.093 12.6 1.8 0.16 11.9 0.7 1.7 1 1 1 2 2 2 0 C protein from hendra and measles viruses Cep57_MT_bd PF06657.13 ORF3991 - 0.47 10.9 5.8 0.21 12.1 1.0 2.1 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 ADIP PF11559.8 ORF3991 - 0.83 9.7 8.0 0.78 9.8 1.8 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF2203 PF09969.9 ORF3991 - 0.85 10.3 5.8 1.8 9.3 1.0 2.2 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) ZapB PF06005.12 ORF3991 - 0.87 10.1 10.3 2.7 8.5 3.1 2.2 2 0 0 2 2 2 0 Cell division protein ZapB WXG100 PF06013.12 ORF3991 - 1.1 9.6 4.7 11 6.3 0.3 2.8 3 0 0 3 3 3 0 Proteins of 100 residues with WXG TolA_bind_tri PF16331.5 ORF3991 - 5.8 7.1 8.6 1.8 8.7 1.6 2.7 2 1 1 3 3 3 0 TolA binding protein trimerisation Ion_trans_2 PF07885.16 ORF39216 - 1.8e-15 56.7 0.5 2.6e-15 56.2 0.5 1.3 1 0 0 1 1 1 1 Ion channel EF-hand_1 PF00036.32 ORF39216 - 1.2e-12 46.4 1.7 1.6e-05 24.1 0.2 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF39216 - 1.2e-12 46.6 2.7 2e-05 24.1 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF39216 - 3.2e-12 46.7 0.5 4.9e-12 46.1 0.5 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF39216 - 1.5e-09 36.9 2.3 0.00054 19.3 0.2 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF39216 - 1.6e-08 34.2 0.1 0.0043 16.9 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF39216 - 0.00072 19.4 0.1 0.27 11.2 0.1 2.3 2 0 0 2 2 2 2 EF hand Exog_C PF18026.1 ORF39216 - 0.16 12.0 0.5 0.26 11.4 0.1 1.6 2 0 0 2 2 2 0 Endo/exonuclease (EXOG) C-terminal domain Tenui_N PF05733.11 ORF39110 - 0.0035 16.9 0.5 0.0045 16.5 0.5 1.1 1 0 0 1 1 1 1 Tenuivirus/Phlebovirus nucleocapsid protein SIT PF15330.6 ORF39110 - 0.028 14.8 0.2 0.047 14.1 0.2 1.5 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT TMEM18 PF14770.6 ORF39110 - 1.6 8.8 4.1 0.97 9.4 0.7 2.1 1 1 0 2 2 2 0 Transmembrane protein 18 RCC1_2 PF13540.6 ORF38628 - 1.8e-07 30.7 5.2 0.21 11.4 0.0 4.1 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 ORF38628 - 0.0017 18.8 0.0 25 5.4 0.0 3.2 3 0 0 3 3 3 0 Spectrin repeat Strep_SA_rep PF06696.11 ORF38628 - 0.0034 17.3 0.8 5.2 7.2 0.0 3.9 4 0 0 4 4 4 1 Streptococcal surface antigen repeat DUF155 PF02582.14 ORF38628 - 0.0063 16.6 0.3 15 5.6 0.0 3.1 2 1 1 3 3 3 1 Uncharacterised ACR, YagE family COG1723 FtsQ PF03799.15 ORF38628 - 0.0064 17.3 0.1 4 8.3 0.0 2.7 1 1 2 3 3 3 2 Cell division protein FtsQ Tugs PF17840.1 ORF38628 - 0.061 13.5 1.6 97 3.3 0.0 3.9 4 0 0 4 4 4 0 Tethering Ubl4a to BAGS domain PheRS_DBD2 PF18554.1 ORF38628 - 0.097 12.7 14.4 3.3 7.8 0.3 3.6 4 0 0 4 4 4 0 PheRS DNA binding domain 2 DUF1120 PF06551.12 ORF38628 - 0.099 12.8 0.2 2.2 8.5 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1120) Fez1 PF06818.15 ORF38628 - 0.13 12.7 0.8 11 6.4 0.0 2.9 3 0 0 3 3 3 0 Fez1 PAP_assoc PF03828.19 ORF38281 - 0.45 10.8 3.2 0.84 9.9 3.2 1.5 1 0 0 1 1 1 0 Cid1 family poly A polymerase Ski_Sno PF02437.17 ORF38089 - 0.1 12.3 0.0 0.25 11.1 0.0 1.5 1 1 0 1 1 1 0 SKI/SNO/DAC family FUR PF01475.19 ORF37890 - 2.8e-15 56.5 0.1 6.4e-15 55.3 0.0 1.6 1 1 1 2 2 2 1 Ferric uptake regulator family HTH_5 PF01022.20 ORF37890 - 0.051 13.5 0.1 0.83 9.6 0.1 2.6 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family PadR PF03551.14 ORF37890 - 0.057 13.4 0.0 0.15 12.1 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family TrmB PF01978.19 ORF37890 - 0.076 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 ORF37890 - 0.09 13.1 0.0 0.13 12.7 0.0 1.4 1 1 0 1 1 1 0 Penicillinase repressor MarR PF01047.22 ORF37890 - 0.15 12.0 0.0 0.57 10.1 0.0 2.1 1 1 0 1 1 1 0 MarR family MCM_bind PF09739.9 ORF35604 - 0.31 9.4 3.8 0.43 9.0 3.8 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Cpn60_TCP1 PF00118.24 ORF35251 - 1.2e-12 47.3 0.0 1.5e-12 46.9 0.0 1.1 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Aldo_ket_red PF00248.21 ORF33474 - 1.5e-26 93.3 0.0 1.8e-26 93.0 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family ANAPC4_WD40 PF12894.7 ORF326 - 8.7e-05 22.8 0.0 0.069 13.5 0.0 2.2 2 0 0 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain DUF1077 PF06417.12 ORF32298 - 1.9e-32 111.7 1.4 2.4e-32 111.4 1.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1077) Pro_isomerase PF00160.21 ORF3196 - 5.1e-49 166.6 0.1 5.7e-49 166.4 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AtpR PF12966.7 ORF3118 - 3.3 8.2 8.5 2.2 8.8 5.7 1.8 1 1 1 2 2 2 0 N-ATPase, AtpR subunit Citrate_synt PF00285.21 ORF29709 - 2.4e-08 33.4 0.0 4.4e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF5539 PF17693.1 ORF2929 - 0.82 9.3 12.2 0.99 9.0 12.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5539) Ist1 PF03398.14 ORF28865 - 8.8e-17 61.5 3.8 9.9e-17 61.3 3.8 1.0 1 0 0 1 1 1 1 Regulator of Vps4 activity in the MVB pathway NIF PF03031.18 ORF28302 - 6.1e-48 162.5 0.3 6.9e-48 162.4 0.3 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Vps23_core PF09454.10 ORF26055 - 1.2e-11 44.4 0.2 1.9e-11 43.7 0.2 1.4 1 0 0 1 1 1 1 Vps23 core domain PSII_Pbs31 PF18240.1 ORF24653 - 5.2e-07 30.0 0.1 1.7e-06 28.4 0.0 1.8 2 0 0 2 2 2 1 Photosystem II Psb31 protein UCR_Fe-S_N PF10399.9 ORF24653 - 0.011 15.1 0.7 0.018 14.4 0.7 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 ORF24653 - 0.18 11.7 0.0 0.18 11.7 0.0 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence DUF1090 PF06476.12 ORF24653 - 0.35 11.0 1.8 8.3 6.6 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1090) LCE6A PF15858.5 ORF23822 - 0.38 11.5 3.7 0.72 10.6 3.7 1.5 1 1 0 1 1 1 0 Late cornified envelope protein 6A family PdxJ PF03740.13 ORF23303 - 1.2e-69 234.0 2.1 1.3e-69 233.9 2.1 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthesis protein PdxJ AP_endonuc_2 PF01261.24 ORF23303 - 0.0027 17.2 1.3 0.0095 15.4 1.3 2.1 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel Wzy_C PF04932.15 ORF22319 - 8.1 6.1 9.5 12 5.5 9.5 1.2 1 0 0 1 1 1 0 O-Antigen ligase CASP_C PF08172.12 ORF22141 - 0.004 16.5 2.9 0.004 16.5 2.9 1.8 1 1 0 1 1 1 1 CASP C terminal Pox_A_type_inc PF04508.12 ORF22141 - 0.0088 15.9 0.5 0.0088 15.9 0.5 2.8 3 0 0 3 3 3 1 Viral A-type inclusion protein repeat HALZ PF02183.18 ORF22141 - 0.017 15.4 9.4 0.29 11.4 0.9 3.2 3 0 0 3 3 3 0 Homeobox associated leucine zipper DUF4145 PF13643.6 ORF22141 - 0.13 12.4 4.3 1.5 9.0 0.5 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4145) TolA_bind_tri PF16331.5 ORF22141 - 0.4 10.8 6.7 0.2 11.7 4.5 1.7 2 0 0 2 2 2 0 TolA binding protein trimerisation Tho2 PF11262.8 ORF22141 - 0.47 9.6 12.1 0.66 9.1 11.3 1.7 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 COG5 PF10392.9 ORF22141 - 0.84 9.8 9.1 0.91 9.7 7.0 1.9 2 0 0 2 2 2 0 Golgi transport complex subunit 5 Prefoldin PF02996.17 ORF22141 - 0.96 9.4 7.4 1.2 9.0 1.3 2.4 2 0 0 2 2 2 0 Prefoldin subunit Rho_Binding PF08912.11 ORF22141 - 1.3 9.9 14.0 0.43 11.4 1.3 2.7 3 0 0 3 3 2 0 Rho Binding FapA PF03961.13 ORF22141 - 2.2 6.8 9.2 3.1 6.3 9.2 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DivIC PF04977.15 ORF22141 - 2.3 8.0 11.0 0.22 11.3 1.3 2.6 2 1 0 3 3 3 0 Septum formation initiator Atg14 PF10186.9 ORF22141 - 4.2 6.4 14.0 3.1 6.8 12.6 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlaC_arch PF05377.11 ORF22141 - 4.4 7.8 11.9 0.27 11.7 1.3 3.2 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) XhlA PF10779.9 ORF22141 - 5.4 7.3 9.8 0.67 10.2 2.1 2.8 3 0 0 3 3 3 0 Haemolysin XhlA DMPK_coil PF08826.10 ORF22141 - 6.8 6.9 9.2 5.4 7.2 5.0 2.7 2 1 1 3 3 3 0 DMPK coiled coil domain like bZIP_1 PF00170.21 ORF22141 - 6.9 6.9 18.0 0.13 12.4 7.8 2.7 2 1 1 3 3 3 0 bZIP transcription factor LysR_substrate PF03466.20 ORF21193 - 4.7e-22 78.4 0.0 5.1e-22 78.3 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain PsaA_PsaB PF00223.19 ORF21048 - 1.5e-18 66.5 10.6 1.3e-08 33.6 2.4 3.0 1 1 1 2 2 2 2 Photosystem I psaA/psaB protein DUF2976 PF11190.8 ORF21048 - 0.08 12.7 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) CorA PF01544.18 ORF19292 - 0.083 12.2 0.9 0.22 10.8 0.9 1.7 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein TetR_C_29 PF17938.1 ORF19292 - 0.14 12.3 0.1 1.6 8.9 0.1 2.1 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain WW PF00397.26 ORF18059 - 4.6e-09 36.2 0.1 8e-09 35.4 0.1 1.4 1 0 0 1 1 1 1 WW domain PSII_Pbs31 PF18240.1 ORF17302 - 5.2e-07 30.0 0.1 1.7e-06 28.4 0.0 1.8 2 0 0 2 2 2 1 Photosystem II Psb31 protein UCR_Fe-S_N PF10399.9 ORF17302 - 0.011 15.1 0.7 0.018 14.4 0.7 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 ORF17302 - 0.18 11.7 0.0 0.18 11.7 0.0 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence DUF1090 PF06476.12 ORF17302 - 0.35 11.0 1.8 8.3 6.6 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1090) PSII_Pbs31 PF18240.1 ORF16921 - 1.7e-07 31.6 0.2 4.2e-07 30.3 0.0 1.7 2 0 0 2 2 2 1 Photosystem II Psb31 protein Cytochrom_C_2 PF01322.20 ORF16921 - 0.11 13.4 0.2 0.19 12.6 0.2 1.4 1 0 0 1 1 1 0 Cytochrome C' CytB6-F_Fe-S PF08802.10 ORF16921 - 0.18 11.9 4.7 7.1 6.8 0.2 2.3 1 1 1 2 2 2 0 Cytochrome B6-F complex Fe-S subunit LCM PF04072.14 ORF1589 - 2.1e-18 67.0 0.0 2.4e-18 66.7 0.0 1.0 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Nudc_N PF14050.6 ORF15194 - 0.17 11.9 0.0 0.39 10.7 0.0 1.5 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. DNA_binding_1 PF01035.20 ORF14672 - 2.9e-35 120.3 0.1 3.9e-35 119.8 0.1 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 ORF14672 - 3.4e-19 69.4 0.0 4.6e-19 69.0 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CBP_BcsS PF17036.5 ORF14441 - 0.11 12.5 0.1 3.1 7.7 0.0 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsS RRM_1 PF00076.22 ORF12123 - 0.0004 20.1 0.0 0.0013 18.6 0.0 1.8 1 1 1 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ribosomal_60s PF00428.19 ORF12123 - 1.6 9.4 4.5 6.6 7.4 0.4 2.8 3 0 0 3 3 3 0 60s Acidic ribosomal protein CK_II_beta PF01214.18 ORF11769 - 2.2e-41 141.7 0.0 2.7e-41 141.4 0.0 1.1 1 0 0 1 1 1 1 Casein kinase II regulatory subunit TetR_C_13 PF16925.5 ORF111644 - 7.3e-11 42.0 0.2 1.4e-10 41.1 0.1 1.5 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 ORF111644 - 1.6e-06 27.8 0.0 2.6e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 ORF111644 - 0.026 14.7 0.4 0.25 11.6 0.0 2.0 2 0 0 2 2 2 0 BetI-type transcriptional repressor, C-terminal SPOC PF07744.13 ORF111644 - 0.073 13.0 0.0 0.37 10.7 0.0 2.0 2 1 0 2 2 2 0 SPOC domain EF-hand_6 PF13405.6 ORF1116 - 5.4e-20 69.6 9.8 2.7e-08 33.1 0.2 4.3 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF1116 - 1.2e-19 70.5 10.0 1.2e-11 44.9 3.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF1116 - 4e-19 66.7 16.7 1.6e-08 33.5 0.2 4.4 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF1116 - 1.1e-12 47.5 16.4 3.6e-07 29.9 1.3 5.0 3 2 2 5 5 5 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF1116 - 1.1e-10 41.7 0.8 4.1e-06 27.0 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF1116 - 3.4e-05 23.1 13.1 9.1e-05 21.8 0.4 4.3 4 0 0 4 4 4 1 EF hand DUF3349 PF11829.8 ORF1116 - 0.0048 17.6 0.4 0.33 11.7 0.1 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF3349) EF-hand_14 PF17959.1 ORF1116 - 0.0065 16.8 2.2 2.6 8.4 0.1 2.6 2 1 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF1116 - 0.0079 16.1 8.0 2.1 8.3 0.2 3.2 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF1116 - 0.024 14.6 0.3 4.3 7.2 0.0 2.8 1 1 2 3 3 3 0 Caleosin related protein FGAR-AT_linker PF18072.1 ORF1116 - 0.044 14.3 1.5 4.1 8.0 0.1 3.3 2 1 2 4 4 4 0 Formylglycinamide ribonucleotide amidotransferase linker domain ADSL_C PF10397.9 ORF1116 - 1 10.0 2.9 41 4.8 0.0 3.2 3 1 0 3 3 3 0 Adenylosuccinate lyase C-terminus DUF5539 PF17693.1 ORF111545 - 0.82 9.3 12.2 0.99 9.0 12.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5539) RBR PF17208.3 ORF111156 - 0.03 15.0 13.4 0.03 15.0 13.4 1.9 1 1 1 2 2 2 0 RNA binding Region RAP PF08373.10 ORF110304 - 0.0014 18.7 0.0 0.002 18.2 0.0 1.3 1 0 0 1 1 1 1 RAP domain ECH_1 PF00378.20 ORF110137 - 7.5e-29 100.8 1.0 8.6e-29 100.6 1.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF110137 - 5.2e-07 29.5 0.0 6.4e-07 29.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase FERM_M PF00373.18 ORF110137 - 0.097 13.1 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 FERM central domain Snf7 PF03357.21 ORF109544 - 0.0032 17.1 2.0 0.0032 17.1 1.1 1.5 1 1 0 1 1 1 1 Snf7 NAD_binding_10 PF13460.6 ORF108652 - 1.1e-13 51.5 0.0 1.3e-13 51.2 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 ORF108652 - 2.6e-06 27.9 0.0 8.3e-06 26.2 0.0 1.7 1 1 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_4 PF07993.12 ORF108652 - 0.00011 21.5 0.0 0.0042 16.3 0.0 2.2 2 0 0 2 2 2 1 Male sterility protein 3Beta_HSD PF01073.19 ORF108652 - 0.00011 21.3 0.0 0.00013 21.1 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NmrA PF05368.13 ORF108652 - 0.0004 20.0 0.0 0.00049 19.7 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 ORF108652 - 0.00044 19.8 0.0 0.00054 19.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family HIM1 PF08732.10 ORF108652 - 0.0025 17.3 0.0 0.0029 17.2 0.0 1.1 1 0 0 1 1 1 1 HIM1 DapB_N PF01113.20 ORF108652 - 0.017 15.2 0.0 0.021 14.9 0.0 1.3 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Pkinase PF00069.25 ORF108121 - 3.1e-32 112.0 0.1 3.5e-32 111.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF108121 - 5.6e-19 68.4 0.0 6.7e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF108121 - 2.5e-05 23.7 0.0 0.00014 21.3 0.0 1.8 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF108121 - 0.00025 20.1 0.1 0.00033 19.7 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF108121 - 0.00049 19.0 0.0 0.00069 18.5 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF108121 - 0.0027 17.1 0.0 0.0042 16.5 0.0 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF108121 - 0.015 14.9 0.0 0.025 14.2 0.0 1.2 1 0 0 1 1 1 0 RIO1 family BBL5 PF07289.11 ORF108121 - 0.057 12.5 0.0 0.072 12.1 0.0 1.1 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein APH PF01636.23 ORF108121 - 0.066 13.1 0.0 0.088 12.7 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Glyco_tran_28_C PF04101.16 ORF107395 - 2.3e-06 27.7 0.1 9.5e-06 25.7 0.1 2.0 1 1 1 2 2 2 1 Glycosyltransferase family 28 C-terminal domain Hydrolase_like PF13242.6 ORF106765 - 1.2e-18 66.9 0.0 1.8e-18 66.4 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 ORF106765 - 0.00021 21.7 0.0 0.00027 21.3 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 ORF106765 - 0.00063 19.4 0.0 0.00093 18.9 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial PGP phosphatase DUF2721 PF11026.8 ORF10636 - 0.082 12.8 3.7 0.055 13.4 1.6 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) EF-hand_6 PF13405.6 ORF106303 - 5.4e-20 69.6 9.8 2.7e-08 33.1 0.2 4.3 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF106303 - 1.2e-19 70.5 10.0 1.2e-11 44.9 3.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF106303 - 4e-19 66.7 16.7 1.6e-08 33.5 0.2 4.4 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF106303 - 1.1e-12 47.5 16.4 3.6e-07 29.9 1.3 5.0 3 2 2 5 5 5 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF106303 - 1.1e-10 41.7 0.8 4.1e-06 27.0 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF106303 - 3.4e-05 23.1 13.1 9.1e-05 21.8 0.4 4.3 4 0 0 4 4 4 1 EF hand DUF3349 PF11829.8 ORF106303 - 0.0048 17.6 0.4 0.33 11.7 0.1 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF3349) EF-hand_14 PF17959.1 ORF106303 - 0.0065 16.8 2.2 2.6 8.4 0.1 2.6 2 1 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF106303 - 0.0079 16.1 8.0 2.1 8.3 0.2 3.2 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF106303 - 0.024 14.6 0.3 4.3 7.2 0.0 2.8 1 1 2 3 3 3 0 Caleosin related protein FGAR-AT_linker PF18072.1 ORF106303 - 0.044 14.3 1.5 4.1 8.0 0.1 3.3 2 1 2 4 4 4 0 Formylglycinamide ribonucleotide amidotransferase linker domain ADSL_C PF10397.9 ORF106303 - 1 10.0 2.9 41 4.8 0.0 3.2 3 1 0 3 3 3 0 Adenylosuccinate lyase C-terminus PSII_Pbs31 PF18240.1 ORF105518 - 1.7e-07 31.6 0.2 4.2e-07 30.3 0.0 1.7 2 0 0 2 2 2 1 Photosystem II Psb31 protein Cytochrom_C_2 PF01322.20 ORF105518 - 0.11 13.4 0.2 0.19 12.6 0.2 1.4 1 0 0 1 1 1 0 Cytochrome C' CytB6-F_Fe-S PF08802.10 ORF105518 - 0.18 11.9 4.7 7.1 6.8 0.2 2.3 1 1 1 2 2 2 0 Cytochrome B6-F complex Fe-S subunit Asp PF00026.23 ORF103887 - 5.2e-09 36.0 0.1 6e-09 35.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease FapA PF03961.13 ORF102773 - 0.08 11.5 6.1 0.088 11.4 6.1 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Sec20 PF03908.13 ORF102773 - 0.17 11.8 2.0 0.28 11.1 0.1 2.2 2 1 0 2 2 2 0 Sec20 BNIP3 PF06553.12 ORF100597 - 0.11 12.1 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 BNIP3 Fig1 PF12351.8 ORF100281 - 0.02 14.8 0.6 0.02 14.8 0.6 2.0 1 1 1 2 2 2 0 Ca2+ regulator and membrane fusion protein Fig1 Viral_Beta_CD PF04530.12 ORF100281 - 1.3 9.4 3.6 1.5 9.2 0.3 2.5 1 1 2 3 3 3 0 Viral Beta C/D like family DUF373 PF04123.13 ORF100281 - 2.7 7.3 8.1 2.1 7.7 6.8 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF373) DUF3339 PF11820.8 NODE_40699_length_508_cov_1.972516_g33195_i0reverse_frame_1 - 0.39 11.0 0.2 0.39 11.0 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3339) Salp15 PF12115.8 NODE_40681_length_508_cov_84.192389_g33178_i0forward_frame_1 - 0.6 10.6 3.4 1 9.8 3.4 1.4 1 1 0 1 1 1 0 Salivary protein of 15kDa inhibits CD4+ T cell activation LPP PF04728.13 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 0.013 15.8 8.5 0.78 10.2 2.0 2.5 2 0 0 2 2 2 0 Lipoprotein leucine-zipper SlyX PF04102.12 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 0.014 16.0 6.2 0.13 12.9 4.8 2.4 1 1 1 2 2 2 0 SlyX DivIC PF04977.15 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 0.029 14.1 16.2 0.19 11.5 1.8 2.6 1 1 1 2 2 2 0 Septum formation initiator TolA_bind_tri PF16331.5 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 0.22 11.6 6.6 0.081 13.0 1.2 2.2 1 1 1 2 2 2 0 TolA binding protein trimerisation YabA PF06156.13 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 1.1 10.0 12.8 0.29 11.8 3.6 2.4 1 1 1 2 2 2 0 Initiation control protein YabA ZapB PF06005.12 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 1.6 9.2 15.7 1.3 9.5 8.3 2.5 1 1 1 2 2 2 0 Cell division protein ZapB XhlA PF10779.9 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 1.9 8.8 11.6 0.44 10.8 6.2 2.4 1 1 0 2 2 2 0 Haemolysin XhlA DUF724 PF05266.14 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 2.6 7.8 16.5 4.1 7.2 16.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Spc24 PF08286.11 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 2.8 8.2 14.6 3.6 7.9 5.1 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 CENP-H PF05837.12 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_1 - 5.9 7.4 18.5 2.5 8.5 1.2 2.3 1 1 0 2 2 2 0 Centromere protein H (CENP-H) DUF4322 PF14210.6 NODE_40654_length_508_cov_284.748414_g33153_i0forward_frame_1 - 0.11 12.4 0.1 0.22 11.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) DUF4094 PF13334.6 NODE_40653_length_508_cov_292.359408_g33152_i0forward_frame_1 - 0.056 13.9 1.2 0.078 13.4 0.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) RCC1 PF00415.18 NODE_40644_length_509_cov_1.854430_g33145_i0forward_frame_1 - 7.4e-36 122.5 0.2 8.9e-13 48.7 0.0 3.1 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_40644_length_509_cov_1.854430_g33145_i0forward_frame_1 - 1.3e-14 53.5 1.3 3.7e-08 33.0 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Pkinase PF00069.25 NODE_40641_length_509_cov_1.968354_g33142_i0reverse_frame_1 - 1.4e-24 86.9 1.1 1.6e-24 86.7 1.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_40641_length_509_cov_1.968354_g33142_i0reverse_frame_1 - 4.9e-17 62.1 0.5 5.7e-17 61.9 0.5 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_40641_length_509_cov_1.968354_g33142_i0reverse_frame_1 - 2e-08 33.8 0.2 2.5e-08 33.5 0.2 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 NODE_40641_length_509_cov_1.968354_g33142_i0reverse_frame_1 - 1.1e-05 24.6 0.2 1.3e-05 24.4 0.2 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Choline_kinase PF01633.20 NODE_40641_length_509_cov_1.968354_g33142_i0reverse_frame_1 - 0.0056 16.3 2.8 0.01 15.5 2.6 1.5 1 1 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 NODE_40641_length_509_cov_1.968354_g33142_i0reverse_frame_1 - 0.017 15.0 0.7 0.055 13.4 0.1 2.1 2 1 0 2 2 2 0 Phosphotransferase enzyme family UPF0565 PF10561.9 NODE_40639_length_509_cov_2.341772_g33140_i0forward_frame_1 - 0.076 12.2 0.9 0.11 11.7 0.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Sorb PF02208.16 NODE_40633_length_509_cov_3.286920_g33134_i0reverse_frame_1 - 0.05 13.5 0.1 0.1 12.5 0.1 1.5 1 0 0 1 1 1 0 Sorbin homologous domain CDC24_OB1 PF17246.2 NODE_40632_length_509_cov_3.430380_g33133_i0reverse_frame_1 - 0.11 12.6 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 1 DUF4116 PF13475.6 NODE_40627_length_509_cov_42.504219_g33128_i0forward_frame_1 - 3.4e-08 33.1 0.0 5.9e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4116) PDZ PF00595.24 NODE_40625_length_509_cov_57.303797_g33126_i0forward_frame_1 - 0.031 14.6 0.4 0.091 13.1 0.1 2.0 2 1 0 2 2 2 0 PDZ domain PilA4 PF18682.1 NODE_40613_length_509_cov_92.898734_g33114_i0reverse_frame_1 - 0.13 12.6 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Pilin A4 ADH_zinc_N_2 PF13602.6 NODE_40607_length_509_cov_114.989451_g31893_i1reverse_frame_1 - 2.5e-15 57.7 0.0 3.8e-15 57.1 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 NODE_40607_length_509_cov_114.989451_g31893_i1reverse_frame_1 - 6.4e-07 29.4 0.0 9e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glyco_hydro_31 PF01055.26 NODE_40597_length_509_cov_397.795359_g33100_i0forward_frame_1 - 9e-37 127.3 0.2 9.8e-37 127.2 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF2475 PF10629.9 NODE_40597_length_509_cov_397.795359_g33100_i0forward_frame_1 - 0.16 12.2 0.1 0.38 11.0 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2475) DUF5408 PF17402.2 NODE_40594_length_509_cov_558.710970_g33097_i0reverse_frame_1 - 0.51 10.3 10.0 1.4 8.8 0.2 3.8 4 0 0 4 4 4 0 Family of unknown function (DUF5408) DUF2530 PF10745.9 NODE_40594_length_509_cov_558.710970_g33097_i0reverse_frame_1 - 0.98 9.7 3.5 5.1 7.4 0.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2530) Mito_morph_reg PF14972.6 NODE_40594_length_509_cov_558.710970_g33097_i0reverse_frame_1 - 1.6 8.3 4.9 0.62 9.7 0.2 2.4 3 0 0 3 3 3 0 Mitochondrial morphogenesis regulator RCC1_2 PF13540.6 NODE_40594_length_509_cov_558.710970_g33097_i0forward_frame_1 - 4.2e-05 23.2 10.2 0.89 9.4 0.1 4.3 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat GST_C_2 PF13410.6 NODE_40594_length_509_cov_558.710970_g33097_i0forward_frame_1 - 0.003 17.6 0.1 7.5 6.7 0.0 3.6 2 1 1 3 3 3 2 Glutathione S-transferase, C-terminal domain DUF4984 PF16372.5 NODE_40594_length_509_cov_558.710970_g33097_i0forward_frame_1 - 0.027 14.4 0.3 55 3.6 0.0 3.5 3 1 1 4 4 4 0 Domain of unknown function (DUF4984) CAMSAP_CH PF11971.8 NODE_40594_length_509_cov_558.710970_g33097_i0forward_frame_1 - 0.12 12.3 0.0 27 4.7 0.0 3.1 3 0 0 3 3 3 0 CAMSAP CH domain NPV_P10 PF05531.12 NODE_40594_length_509_cov_558.710970_g33097_i0forward_frame_1 - 0.14 12.6 2.4 5 7.7 0.5 3.4 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DDE_Tnp_1_3 PF13612.6 NODE_40594_length_509_cov_558.710970_g33097_i0forward_frame_1 - 0.3 11.1 1.0 26 4.8 0.0 3.4 4 0 0 4 4 4 0 Transposase DDE domain ThrE PF06738.12 NODE_40594_length_509_cov_558.710970_g33097_i0forward_frame_1 - 0.45 9.8 3.7 7.5 5.8 0.2 2.7 1 1 2 3 3 3 0 Putative threonine/serine exporter UVR PF02151.19 NODE_40594_length_509_cov_558.710970_g33097_i0forward_frame_1 - 3.5 7.5 5.1 38 4.2 0.2 3.5 4 0 0 4 4 4 0 UvrB/uvrC motif Ribosomal_S25 PF03297.15 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 2.8e-28 98.1 3.1 2.8e-28 98.1 3.1 2.1 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 0.01 15.4 0.5 0.013 15.1 0.5 1.2 1 0 0 1 1 1 0 Peptidase family S41 GntR PF00392.21 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 0.1 12.3 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 0.37 11.2 6.6 17 5.8 6.6 2.2 1 1 0 1 1 1 0 Recombinase AP3D1 PF06375.11 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 4.1 7.6 11.8 3.3 7.9 4.2 2.1 2 0 0 2 2 2 0 AP-3 complex subunit delta-1 Acetyltransf_10 PF13673.7 NODE_40582_length_510_cov_2.793684_g33087_i0reverse_frame_1 - 0.09 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 NODE_40582_length_510_cov_2.793684_g33087_i0reverse_frame_1 - 0.14 12.6 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF443 PF04276.12 NODE_40582_length_510_cov_2.793684_g33087_i0forward_frame_1 - 0.083 12.7 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF443) DUF4346 PF14251.6 NODE_40578_length_510_cov_3.221053_g33083_i0reverse_frame_1 - 0.077 13.0 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4346) Syndecan PF01034.20 NODE_40569_length_510_cov_68.431579_g33074_i0forward_frame_1 - 7.3 6.6 8.4 0.23 11.4 0.6 2.2 2 0 0 2 2 2 0 Syndecan domain Zn_ribbon_17 PF17120.5 NODE_40563_length_510_cov_88.930526_g33068_i0reverse_frame_1 - 0.028 14.0 0.6 0.06 13.0 0.6 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type DUF3677 PF12432.8 NODE_40544_length_510_cov_221.947368_g33050_i0forward_frame_1 - 0.011 16.1 0.2 0.022 15.1 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3677) DUF2206 PF09971.9 NODE_40542_length_510_cov_262.776842_g33048_i0forward_frame_1 - 0.0056 15.5 4.5 0.0073 15.1 4.5 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2206) DUF4483 PF14825.6 NODE_40534_length_511_cov_2.254202_g33043_i0forward_frame_3 - 0.0045 16.8 0.0 0.0065 16.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4483) ArAE_1_C PF11728.8 NODE_40530_length_511_cov_2.611345_g33039_i0reverse_frame_3 - 0.087 12.8 0.0 1.1 9.3 0.0 2.0 2 0 0 2 2 2 0 Putative aromatic acid exporter C-terminal domain Bac_DNA_binding PF00216.21 NODE_40530_length_511_cov_2.611345_g33039_i0forward_frame_2 - 0.068 13.4 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial DNA-binding protein zf-Nse PF11789.8 NODE_40528_length_511_cov_2.789916_g33037_i0reverse_frame_3 - 0.0026 17.5 0.4 0.0068 16.2 0.4 1.7 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Microcin PF03526.13 NODE_40528_length_511_cov_2.789916_g33037_i0reverse_frame_3 - 0.11 12.4 0.0 0.29 11.0 0.0 1.7 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein Usher PF00577.20 NODE_40528_length_511_cov_2.789916_g33037_i0forward_frame_3 - 4.5e-56 190.8 6.2 5.5e-56 190.6 6.2 1.0 1 0 0 1 1 1 1 Outer membrane usher protein DUF3081 PF11280.8 NODE_40528_length_511_cov_2.789916_g33037_i0forward_frame_3 - 0.13 12.1 0.3 0.22 11.4 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3081) Flavi_NS4A PF01350.17 NODE_40526_length_511_cov_3.176471_g33035_i0reverse_frame_2 - 0.0029 17.5 4.3 0.0055 16.6 4.3 1.5 1 0 0 1 1 1 1 Flavivirus non-structural protein NS4A DUF3810 PF12725.7 NODE_40526_length_511_cov_3.176471_g33035_i0reverse_frame_2 - 9.7 5.4 10.2 13 5.1 10.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) TFIID-18kDa PF02269.16 NODE_40524_length_511_cov_4.111345_g33033_i0reverse_frame_3 - 0.028 14.4 0.1 0.057 13.4 0.1 1.5 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit TetR_C_23 PF17931.1 NODE_40524_length_511_cov_4.111345_g33033_i0reverse_frame_3 - 0.042 14.0 0.1 0.086 13.0 0.1 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF1146 PF06612.11 NODE_40521_length_511_cov_17.500000_g33030_i0reverse_frame_2 - 0.12 12.5 0.2 16 5.6 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1146) FGFR3_TM PF18123.1 NODE_40506_length_511_cov_101.649160_g33016_i0reverse_frame_2 - 3 7.4 7.4 2.1 8.0 2.8 2.4 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain MyTH4 PF00784.17 NODE_40506_length_511_cov_101.649160_g33016_i0forward_frame_3 - 0.45 11.0 7.8 3.5 8.1 0.1 3.2 3 1 1 4 4 4 0 MyTH4 domain DUF1145 PF06611.12 NODE_40506_length_511_cov_101.649160_g33016_i0forward_frame_2 - 6 6.9 8.2 9.4 6.3 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1145) Sulfotransfer_4 PF17784.1 NODE_40504_length_511_cov_125.926471_g33014_i0reverse_frame_2 - 0.073 12.9 0.0 0.16 11.8 0.0 1.5 2 0 0 2 2 2 0 Sulfotransferase domain DUF678 PF05077.12 NODE_40497_length_511_cov_301.846639_g33008_i0reverse_frame_3 - 1.1 9.5 5.8 2.6 8.2 0.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF678) Hydrolase_4 PF12146.8 NODE_40497_length_511_cov_301.846639_g33008_i0reverse_frame_2 - 0.001 18.4 0.1 0.0027 17.0 0.1 1.6 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 NODE_40497_length_511_cov_301.846639_g33008_i0reverse_frame_2 - 0.22 11.1 0.0 3.2 7.3 0.0 2.0 1 1 0 2 2 2 0 alpha/beta hydrolase fold IpaB_EvcA PF03278.13 NODE_40493_length_511_cov_374.548319_g33004_i0reverse_frame_2 - 0.0017 18.1 0.5 0.0024 17.6 0.5 1.2 1 0 0 1 1 1 1 IpaB/EvcA family DUF3718 PF12514.8 NODE_40493_length_511_cov_374.548319_g33004_i0reverse_frame_2 - 1.1 9.4 3.7 7.9 6.7 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3718) DX PF01666.17 NODE_40487_length_511_cov_4477.163866_g33001_i0forward_frame_2 - 0.048 14.1 0.5 0.084 13.3 0.5 1.5 1 0 0 1 1 1 0 DX module ABC2_membrane_3 PF12698.7 NODE_40481_length_512_cov_2.631027_g32997_i0reverse_frame_3 - 6.8e-15 55.0 7.7 7.6e-15 54.9 7.7 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein SSXRD PF09514.10 NODE_40480_length_512_cov_2.693920_g32996_i0reverse_frame_3 - 0.082 12.5 2.7 0.19 11.3 2.7 1.6 1 0 0 1 1 1 0 SSXRD motif Pyr_redox_2 PF07992.14 NODE_40480_length_512_cov_2.693920_g32996_i0forward_frame_3 - 8e-20 71.3 0.2 1.1e-19 70.8 0.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 NODE_40480_length_512_cov_2.693920_g32996_i0forward_frame_3 - 6e-18 65.1 0.0 1.4e-17 63.9 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Exo_endo_phos PF03372.23 NODE_40479_length_512_cov_3.270440_g32994_i1forward_frame_3 - 0.0016 18.0 0.0 0.002 17.7 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family BatD PF13584.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 1.5e-05 24.0 0.1 1.8e-05 23.8 0.1 1.1 1 0 0 1 1 1 1 Oxygen tolerance TMEM51 PF15345.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 2.2e-05 24.4 0.8 3e-05 24.0 0.8 1.3 1 0 0 1 1 1 1 Transmembrane protein 51 TMEM154 PF15102.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 2.5e-05 24.2 4.8 2.5e-05 24.2 4.8 1.6 1 1 1 2 2 2 1 TMEM154 protein family FAM176 PF14851.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.001 18.7 0.3 0.001 18.7 0.3 2.2 1 1 1 2 2 2 1 FAM176 family CSG2 PF16965.5 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.0013 17.8 2.1 0.0016 17.5 2.1 1.1 1 0 0 1 1 1 1 Ceramide synthase regulator EphA2_TM PF14575.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.002 19.0 0.4 0.018 15.9 0.0 2.1 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain SARAF PF06682.12 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.0031 17.2 0.3 0.0038 16.9 0.3 1.1 1 0 0 1 1 1 1 SOCE-associated regulatory factor of calcium homoeostasis DUF5305 PF17231.2 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.0033 16.9 0.2 0.006 16.0 0.2 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5305) Orf78 PF06024.12 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.0035 17.6 3.1 0.0035 17.6 3.1 2.2 1 1 1 2 2 2 1 Orf78 (ac78) SID-1_RNA_chan PF13965.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.015 13.7 5.7 0.018 13.4 5.7 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Herpes_gE PF02480.16 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.021 13.6 0.0 0.025 13.3 0.0 1.2 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E TMEM52 PF14979.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.021 14.7 0.1 0.035 14.0 0.1 1.5 1 1 0 1 1 1 0 Transmembrane 52 SIT PF15330.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.025 15.0 1.7 0.083 13.3 0.0 2.1 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT Peptidase_M56 PF05569.11 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.026 13.7 0.4 0.03 13.5 0.3 1.2 1 1 0 1 1 1 0 BlaR1 peptidase M56 Presenilin PF01080.17 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.026 13.3 3.9 0.031 13.1 3.9 1.1 1 0 0 1 1 1 0 Presenilin Shisa PF13908.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.03 14.6 2.4 0.043 14.1 2.4 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Sigma_reg_N PF13800.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.054 13.8 0.4 0.14 12.5 0.0 1.9 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF5383 PF17355.2 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.079 13.3 0.3 0.079 13.3 0.3 1.9 2 1 0 2 2 2 0 Family of unknown function (DUF5383) DUF4834 PF16118.5 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.13 13.2 0.1 0.13 13.2 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4834) Podoplanin PF05808.11 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.16 12.1 3.7 0.24 11.5 0.2 2.0 1 1 1 2 2 2 0 Podoplanin Otopetrin PF03189.13 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.24 10.2 3.2 0.27 10.0 3.2 1.1 1 0 0 1 1 1 0 Otopetrin TMEM100 PF16311.5 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.36 10.4 4.9 0.27 10.8 0.2 2.2 1 1 2 3 3 3 0 Transmembrane protein 100 DUF3675 PF12428.8 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.37 11.4 2.1 0.41 11.2 0.2 1.9 1 1 2 3 3 2 0 Protein of unknown function (DUF3675) Serinc PF03348.15 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.38 9.6 2.1 0.44 9.4 2.1 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) Renin_r PF07850.14 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.39 11.4 4.7 0.29 11.8 0.5 2.4 1 1 1 2 2 2 0 Renin receptor-like protein Conotoxin PF02950.17 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 0.57 11.2 5.1 8.4 7.5 0.2 2.3 2 0 0 2 2 2 0 Conotoxin Mtc PF03820.17 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 1.3 8.0 5.2 1.5 7.8 5.2 1.1 1 0 0 1 1 1 0 Tricarboxylate carrier Connexin PF00029.19 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 1.5 8.5 4.6 2.8 7.6 0.1 2.0 1 1 1 2 2 2 0 Connexin MAP17 PF15807.5 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 2.2 8.6 9.4 0.21 11.9 0.2 2.1 1 1 1 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF2370 PF10176.9 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 3.9 7.1 9.3 0.92 9.1 0.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2370) ATAD4 PF15321.6 NODE_40478_length_512_cov_3.280922_g32995_i0forward_frame_3 - 8.2 7.8 12.6 7.5 8.0 3.3 2.1 2 0 0 2 2 2 0 ATPase family AAA domain containing 4 Exo_endo_phos PF03372.23 NODE_40477_length_512_cov_3.354298_g32994_i0forward_frame_3 - 0.0016 18.0 0.0 0.002 17.7 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family MukB_hinge PF16330.5 NODE_40470_length_512_cov_70.025157_g32987_i0reverse_frame_3 - 0.072 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 MukB hinge domain MT PF12777.7 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 2.2e-12 46.7 1.7 2.6e-12 46.4 1.7 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor APG6_N PF17675.1 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.0023 18.5 9.2 0.0028 18.2 9.2 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region Exonuc_VII_L PF02601.15 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.013 15.1 4.2 0.015 14.9 4.2 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF745 PF05335.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.017 14.8 6.7 0.023 14.4 6.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) DUF3450 PF11932.8 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.026 13.9 5.7 0.038 13.3 5.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Tropomyosin_1 PF12718.7 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.028 14.6 10.2 0.16 12.1 10.4 2.0 1 1 0 1 1 1 0 Tropomyosin like DUF948 PF06103.11 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.032 14.5 3.7 0.28 11.5 0.2 2.8 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) TMPIT PF07851.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.036 13.3 3.3 0.052 12.8 3.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein Tmemb_9 PF05434.11 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.039 13.8 1.9 0.071 13.0 1.9 1.7 1 1 0 1 1 1 0 TMEM9 Viral_P18 PF04521.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.053 13.3 1.0 0.087 12.6 0.3 1.7 1 1 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein FlaC_arch PF05377.11 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.069 13.5 1.2 0.069 13.5 1.2 3.1 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) Fez1 PF06818.15 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.07 13.6 7.9 0.088 13.2 7.3 1.4 1 1 0 1 1 1 0 Fez1 RPW8 PF05659.11 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.11 12.1 4.1 0.18 11.5 0.9 2.2 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 HIP1_clath_bdg PF16515.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.12 13.0 11.9 1.4 9.6 10.9 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 PI3K_P85_iSH2 PF16454.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.18 11.4 8.5 0.49 10.0 8.1 1.9 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain FAM76 PF16046.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.34 10.2 5.5 0.41 9.9 5.5 1.1 1 0 0 1 1 1 0 FAM76 protein LMBR1 PF04791.16 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.35 9.7 2.2 0.38 9.6 2.2 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2730 PF10805.8 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.45 10.6 5.3 1.6 8.9 1.4 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF2730) NPV_P10 PF05531.12 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.52 10.8 5.8 1.2 9.7 5.3 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein GrpE PF01025.19 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.59 9.8 6.6 1.4 8.6 5.5 1.9 2 0 0 2 2 2 0 GrpE Seryl_tRNA_N PF02403.22 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.61 10.3 11.5 0.13 12.5 7.4 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Laminin_II PF06009.12 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.71 9.9 10.0 0.85 9.6 7.9 2.1 1 1 1 2 2 2 0 Laminin Domain II PilO PF04350.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.81 9.8 8.3 5.1 7.3 2.9 2.2 2 0 0 2 2 2 0 Pilus assembly protein, PilO TPR_MLP1_2 PF07926.12 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 1.2 9.2 13.8 1.7 8.7 7.1 2.4 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein TolA_bind_tri PF16331.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 1.7 8.8 10.9 5.2 7.2 1.2 2.4 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF4140 PF13600.6 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 2.1 8.8 5.4 0.77 10.2 1.3 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) BST2 PF16716.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 3.4 8.3 12.1 0.56 10.8 5.3 2.5 2 1 0 3 3 2 0 Bone marrow stromal antigen 2 YabA PF06156.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 4 8.1 7.8 4.4 8.0 5.7 2.1 2 1 0 2 2 2 0 Initiation control protein YabA Uso1_p115_C PF04871.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 5.3 7.4 12.5 3.7 7.9 6.7 2.2 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region PCRF PF03462.18 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 6 6.7 8.3 4.5 7.1 3.7 1.7 1 1 1 2 2 2 0 PCRF domain DivIVA PF05103.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 6.4 6.9 10.5 3.7 7.7 7.9 1.8 1 1 1 2 2 2 0 DivIVA protein IL13 PF03487.13 NODE_40469_length_512_cov_71.752621_g32986_i0forward_frame_3 - 0.075 12.8 3.3 0.097 12.5 2.8 1.4 1 1 0 1 1 1 0 Interleukin-13 PHD20L1_u1 PF16660.5 NODE_40466_length_512_cov_92.348008_g32983_i0reverse_frame_2 - 0.8 10.5 4.6 0.39 11.5 2.2 1.7 2 0 0 2 2 2 0 PHD finger protein 20-like protein 1 cNMP_binding PF00027.29 NODE_40464_length_512_cov_95.559748_g32981_i0reverse_frame_2 - 4.8e-07 29.8 0.0 8.9e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Ogr_Delta PF04606.12 NODE_40451_length_512_cov_173.911950_g32968_i0reverse_frame_2 - 0.028 14.4 0.3 0.07 13.1 0.3 1.7 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger Nucleoside_tran PF01733.18 NODE_40446_length_512_cov_208.396226_g32963_i0forward_frame_3 - 1.4e-13 51.0 0.5 2.1e-13 50.3 0.5 1.3 1 0 0 1 1 1 1 Nucleoside transporter DUF5345 PF17280.2 NODE_40446_length_512_cov_208.396226_g32963_i0forward_frame_3 - 0.74 9.8 0.0 0.74 9.8 0.0 2.3 3 0 0 3 3 3 0 Family of unknown function (DUF5345) DUF1644 PF07800.12 NODE_40429_length_512_cov_5275.303983_g32896_i2reverse_frame_2 - 0.029 14.4 0.9 0.081 13.0 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1644) Kelch_4 PF13418.6 NODE_40421_length_513_cov_2.905858_g32942_i0reverse_frame_2 - 1.9e-12 47.0 2.1 0.00013 21.9 0.1 3.3 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_40421_length_513_cov_2.905858_g32942_i0reverse_frame_2 - 8.7e-12 45.0 0.7 5.4e-07 29.7 0.0 3.5 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_40421_length_513_cov_2.905858_g32942_i0reverse_frame_2 - 1.5e-06 28.2 2.2 0.007 16.6 0.0 3.4 3 1 0 3 3 3 2 Kelch motif Kelch_1 PF01344.25 NODE_40421_length_513_cov_2.905858_g32942_i0reverse_frame_2 - 4.4e-06 26.2 3.5 0.00051 19.6 0.1 3.1 3 0 0 3 3 3 2 Kelch motif Kelch_5 PF13854.6 NODE_40421_length_513_cov_2.905858_g32942_i0reverse_frame_2 - 6.5e-06 26.0 4.2 0.0022 17.9 0.1 3.3 3 1 0 3 3 3 2 Kelch motif Ribosomal_S3Ae PF01015.18 NODE_40409_length_513_cov_71.140167_g32931_i0reverse_frame_3 - 0.025 14.2 0.1 0.036 13.7 0.1 1.1 1 0 0 1 1 1 0 Ribosomal S3Ae family NRN1 PF15056.6 NODE_40392_length_513_cov_124.269874_g32914_i0forward_frame_3 - 0.22 11.6 1.1 2 8.6 0.7 2.1 2 0 0 2 2 2 0 Neuritin protein family DUF1644 PF07800.12 NODE_40370_length_513_cov_5264.267782_g32896_i1forward_frame_3 - 0.027 14.6 0.9 0.066 13.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1644) DUF1644 PF07800.12 NODE_40369_length_513_cov_5264.267782_g32896_i0reverse_frame_3 - 0.025 14.6 0.8 0.076 13.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1644) RTC_insert PF05189.13 ORF99946 - 6.2e-22 78.1 0.0 1.4e-21 76.9 0.0 1.6 2 0 0 2 2 2 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain RTC PF01137.21 ORF99946 - 6.2e-06 25.6 0.0 6.2e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase ATG22 PF11700.8 ORF98741 - 0.00013 20.7 5.0 0.00017 20.4 5.0 1.3 1 1 0 1 1 1 1 Vacuole effluxer Atg22 like MFS_2 PF13347.6 ORF98741 - 0.0033 16.0 1.6 0.0033 16.0 1.6 2.0 1 1 1 2 2 2 2 MFS/sugar transport protein Aldedh PF00171.22 ORF98045 - 1.8e-14 53.1 0.0 2.2e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Fer4_11 PF13247.6 ORF97165 - 1.1e-10 41.5 10.8 1.3e-07 31.7 4.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF97165 - 6.6e-10 39.8 9.3 0.004 18.0 0.8 3.4 3 1 0 3 3 3 3 4Fe-4S double cluster binding domain Fer4 PF00037.27 ORF97165 - 3.5e-09 36.1 25.2 7.6e-07 28.7 1.3 4.4 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_7 PF12838.7 ORF97165 - 7.5e-08 32.8 17.7 0.00017 22.1 8.6 3.0 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF97165 - 1.1e-06 28.4 24.7 0.0013 18.7 1.1 3.6 3 1 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 ORF97165 - 1.1e-06 28.6 13.7 0.0051 17.0 10.5 3.0 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF97165 - 5.6e-05 23.8 30.6 0.029 15.3 2.6 3.3 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4_10 PF13237.6 ORF97165 - 0.00012 22.1 18.4 0.037 14.2 8.9 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF97165 - 0.0053 16.9 12.6 0.0053 16.9 12.6 3.2 2 2 0 2 2 2 1 4Fe-4S dicluster domain ETF_QO PF05187.13 ORF97165 - 0.013 15.6 4.1 0.046 13.8 2.6 2.2 2 1 0 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_5 PF12801.7 ORF97165 - 0.03 14.3 2.8 2.6 8.1 0.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 ORF97165 - 0.035 14.2 1.0 0.035 14.2 1.0 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 ORF97165 - 0.037 14.6 15.5 0.8 10.3 2.5 3.3 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF97165 - 0.16 12.5 16.6 0.84 10.1 0.9 3.1 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 ORF97165 - 0.96 10.0 10.8 2.2 8.9 0.9 3.3 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 ORF97165 - 3.6 7.8 10.5 2.2 8.5 5.3 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain DUF1279 PF06916.13 ORF97101 - 0.095 13.3 0.1 0.13 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1279) HECT PF00632.25 ORF94916 - 6.7e-32 111.2 1.3 7.6e-32 111.0 1.3 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) PBP1_TM PF14812.6 ORF94016 - 6.7 7.2 10.9 53 4.3 0.1 2.5 2 1 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal MS_channel PF00924.18 ORF93704 - 0.0011 18.5 0.0 0.0014 18.3 0.0 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel Cohesin_HEAT PF12765.7 ORF93704 - 0.065 13.6 0.1 4.2 7.8 0.1 2.3 2 0 0 2 2 2 0 HEAT repeat associated with sister chromatid cohesion DUF1324 PF07038.11 ORF93297 - 0.066 13.5 0.6 0.43 10.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1324) DUF2475 PF10629.9 ORF92960 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) Hep_59 PF07052.11 ORF90883 - 3.1e-18 66.5 0.4 3.1e-18 66.5 0.4 1.7 2 0 0 2 2 2 1 Hepatocellular carcinoma-associated antigen 59 Arteri_GP4 PF02497.15 ORF90470 - 0.022 14.9 0.0 0.029 14.5 0.0 1.2 1 0 0 1 1 1 0 Arterivirus glycoprotein adh_short PF00106.25 ORF90359 - 5.1e-30 104.4 1.4 5.7e-30 104.2 1.4 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF90359 - 7.2e-20 71.5 0.3 9.2e-20 71.2 0.3 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF90359 - 1.3e-09 38.3 0.3 3.3e-07 30.4 0.1 2.3 2 1 0 2 2 2 2 KR domain REPA_OB_2 PF16900.5 ORF9034 - 0.076 12.9 0.0 5.3 7.0 0.0 2.4 1 1 1 2 2 2 0 Replication protein A OB domain Ank_2 PF12796.7 ORF89438 - 8.9e-21 74.3 0.1 5.5e-09 36.5 0.0 3.0 1 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF89438 - 1e-17 64.0 0.4 9.7e-06 25.8 0.0 3.9 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF89438 - 8.3e-16 58.1 0.0 2.1e-05 25.0 0.0 3.9 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF89438 - 1e-15 56.3 0.1 0.025 15.1 0.0 4.6 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF89438 - 1.1e-13 50.9 1.2 0.063 13.8 0.0 5.1 5 0 0 5 5 5 3 Ankyrin repeat DUF5110 PF17137.4 ORF89400 - 0.00072 19.8 0.0 0.0014 18.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) HTS PF04204.16 ORF89400 - 0.13 11.2 0.0 0.17 10.8 0.0 1.1 1 0 0 1 1 1 0 Homoserine O-succinyltransferase ERGIC_N PF13850.6 ORF89240 - 0.0048 17.2 1.1 0.012 15.9 0.5 1.9 2 0 0 2 2 2 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Epimerase_2 PF02350.19 ORF89240 - 0.0093 14.9 0.1 0.012 14.5 0.1 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase MscL PF01741.18 ORF89240 - 0.011 16.0 0.3 0.019 15.2 0.3 1.3 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL Oxidored_q3 PF00499.20 ORF89240 - 0.033 13.9 0.0 0.042 13.6 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Wzy_C_2 PF11846.8 ORF89240 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal TPR_2 PF07719.17 ORF89125 - 0.032 14.4 0.1 4.2 7.7 0.0 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat Imm25 PF15564.6 ORF87534 - 0.069 13.1 0.0 0.13 12.1 0.0 1.5 1 1 1 2 2 2 0 Immunity protein 25 SHS2_Rpb7-N PF03876.17 ORF85861 - 2.6e-12 46.9 0.0 3.9e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 ORF85861 - 2.5e-08 34.2 0.0 3.9e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.12 ORF85861 - 5.8e-05 23.3 0.1 0.00012 22.3 0.0 1.6 2 0 0 2 2 2 1 RNA polymerase III subunit Rpc25 WD40 PF00400.32 ORF8359 - 4.9e-06 27.2 0.3 3.3e-05 24.6 0.1 2.2 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF8359 - 0.0019 18.5 0.0 0.012 15.9 0.0 2.3 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain DUF2475 PF10629.9 ORF82121 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) ABC_tran PF00005.27 ORF81987 - 1.3e-11 45.2 0.0 2e-11 44.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF81987 - 2e-08 34.0 0.1 2.5e-08 33.7 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF81987 - 0.0086 16.3 0.6 0.24 11.6 0.6 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit SAM35 PF10806.8 ORF79464 - 0.07 13.4 4.0 0.26 11.6 3.7 2.0 1 1 0 1 1 1 0 SAM35, subunit of SAM coomplex Peptidase_C50 PF03568.17 ORF79464 - 0.21 10.7 5.0 0.26 10.3 5.0 1.2 1 0 0 1 1 1 0 Peptidase family C50 CbiN PF02553.15 ORF77596 - 0.14 12.2 0.5 0.28 11.2 0.5 1.5 1 0 0 1 1 1 0 Cobalt transport protein component CbiN Presenilin PF01080.17 ORF77596 - 0.47 9.1 8.2 0.57 8.9 8.2 1.1 1 0 0 1 1 1 0 Presenilin MMU163 PF17119.5 ORF77596 - 1.5 8.0 6.2 1.8 7.6 6.2 1.1 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis Zip PF02535.22 ORF77596 - 2.3 7.4 5.4 2.4 7.3 5.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter MID_pPIWI_RE PF18157.1 ORF77210 - 0.021 15.1 1.0 0.033 14.5 0.5 1.8 1 1 1 2 2 2 0 MID domain of pPIWI_RE SID-1_RNA_chan PF13965.6 ORF76669 - 0.00057 18.4 0.1 0.00072 18.1 0.1 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 Neur_chan_memb PF02932.16 ORF76669 - 0.0021 18.1 0.5 0.0026 17.8 0.5 1.1 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel transmembrane region SpoIIIAH PF12685.7 ORF76669 - 0.0029 17.5 1.0 0.005 16.7 1.0 1.4 1 0 0 1 1 1 1 SpoIIIAH-like protein BUD22 PF09073.10 ORF76669 - 0.0041 16.5 12.2 0.0051 16.2 12.2 1.0 1 0 0 1 1 1 1 BUD22 DUF4134 PF13572.6 ORF76669 - 0.0066 16.7 0.1 0.0098 16.2 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4134) Apt1 PF10351.9 ORF76669 - 0.01 14.7 1.7 0.01 14.7 1.7 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF4064 PF13273.6 ORF76669 - 0.037 14.3 0.6 0.037 14.3 0.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) DUF3328 PF11807.8 ORF76669 - 0.047 13.5 0.3 0.061 13.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) Mem_trans PF03547.18 ORF76669 - 0.066 11.6 0.0 0.12 10.7 0.0 1.4 1 1 0 1 1 1 0 Membrane transport protein DUF1218 PF06749.12 ORF76669 - 0.067 13.7 0.0 0.096 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) EphA2_TM PF14575.6 ORF76669 - 0.071 14.0 0.1 0.18 12.7 0.1 1.8 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Hid1 PF12722.7 ORF76669 - 0.14 10.3 5.8 0.15 10.1 5.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Chordopox_A13L PF05961.11 ORF76669 - 0.2 11.9 0.0 0.2 11.9 0.0 2.6 1 1 1 2 2 2 0 Chordopoxvirus A13L protein ODV-E18 PF10717.9 ORF76669 - 0.76 9.7 2.4 0.6 10.0 0.2 1.9 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 SARAF PF06682.12 ORF76669 - 0.8 9.3 5.6 4.4 6.8 5.4 1.9 1 1 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis DUF913 PF06025.12 ORF76669 - 1.1 8.1 6.2 1.7 7.5 6.2 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF4834 PF16118.5 ORF76669 - 1.2 10.2 7.0 40 5.2 7.0 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) UPF0239 PF06783.11 ORF76669 - 1.8 8.8 0.0 1.8 8.8 0.0 3.1 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0239) Tim54 PF11711.8 ORF76669 - 4.8 5.9 15.2 6.9 5.4 15.2 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 LTP_2 PF14368.6 ORF76394 - 0.067 13.3 4.9 2.8 8.1 0.3 2.3 1 1 1 2 2 2 0 Probable lipid transfer oligo_HPY PF08352.12 ORF75590 - 4.5e-19 68.7 0.2 7e-19 68.1 0.2 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region ABC_tran PF00005.27 ORF75590 - 0.00023 21.7 0.1 0.00039 20.9 0.1 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF75590 - 0.00074 19.4 0.3 0.00098 19.0 0.3 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Herpes_ori_bp PF02399.15 ORF75590 - 0.043 11.9 0.1 0.049 11.7 0.1 1.0 1 0 0 1 1 1 0 Origin of replication binding protein Pkinase PF00069.25 ORF74267 - 1.7e-25 89.9 0.6 1.7e-25 89.9 0.6 1.5 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF74267 - 5.7e-18 65.1 0.1 9.3e-18 64.4 0.1 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PSP1 PF04468.12 ORF74267 - 0.0023 18.2 0.2 0.0091 16.3 0.0 1.9 1 1 1 2 2 2 1 PSP1 C-terminal conserved region ADP_PFK_GK PF04587.15 ORF74267 - 0.014 14.0 2.8 0.083 11.4 0.2 2.1 1 1 0 2 2 2 0 ADP-specific Phosphofructokinase/Glucokinase conserved region DUF4113 PF13438.6 ORF71734 - 0.035 14.2 0.0 0.073 13.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4113) DUF2475 PF10629.9 ORF70556 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) Exo_endo_phos PF03372.23 ORF67300 - 8.9e-07 28.7 0.0 1.1e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF67300 - 0.17 11.7 0.0 0.31 10.9 0.0 1.6 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase DUF3391 PF11871.8 ORF66107 - 0.14 12.7 5.2 3 8.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) CDC45 PF02724.14 ORF66107 - 0.75 8.0 6.5 0.75 8.0 6.5 1.1 1 0 0 1 1 1 0 CDC45-like protein TERB2 PF15101.6 ORF66107 - 5.3 7.0 9.3 5.8 6.9 9.3 1.3 1 1 0 1 1 1 0 Telomere-associated protein TERB2 DUF5110 PF17137.4 ORF65613 - 0.00072 19.8 0.0 0.0014 18.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) HTS PF04204.16 ORF65613 - 0.13 11.2 0.0 0.17 10.8 0.0 1.1 1 0 0 1 1 1 0 Homoserine O-succinyltransferase Gtr1_RagA PF04670.12 ORF65292 - 1.2e-21 77.2 0.7 1.7e-21 76.6 0.4 1.4 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Herpes_UL33 PF03581.13 ORF65292 - 0.23 11.8 1.3 3.2 8.2 0.2 2.4 2 1 0 2 2 2 0 Herpesvirus UL33-like protein SPACA9 PF15120.6 ORF6203 - 0.032 14.0 0.3 0.62 9.8 0.1 2.1 2 0 0 2 2 2 0 Sperm acrosome-associated protein 9 PRKCSH PF07915.13 ORF6203 - 0.91 10.6 4.2 0.26 12.3 0.4 2.0 2 1 0 2 2 2 0 Glucosidase II beta subunit-like protein PP2C PF00481.21 ORF61842 - 4.7e-48 164.1 0.0 5.7e-48 163.8 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF61842 - 0.011 15.4 0.0 0.011 15.3 0.0 1.3 1 1 0 1 1 1 0 Protein phosphatase 2C SpoIIE PF07228.12 ORF61842 - 0.019 14.9 0.0 0.47 10.3 0.0 2.0 2 0 0 2 2 2 0 Stage II sporulation protein E (SpoIIE) CxC2 PF18803.1 ORF61842 - 0.036 14.2 0.1 0.062 13.5 0.1 1.3 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases 4HFCP_synth PF04476.13 ORF61842 - 0.066 12.9 0.0 0.093 12.4 0.0 1.2 1 0 0 1 1 1 0 4-HFC-P synthase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks125.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks125.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks125.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks125.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:49:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Neugrin PF06413.11 ORF583 - 0.15 12.1 3.7 0.35 10.9 3.5 1.7 1 1 0 1 1 1 0 Neugrin HMMR_N PF15905.5 ORF5530 - 0.0028 17.2 18.4 0.0034 16.9 18.4 1.3 1 1 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal PKcGMP_CC PF16808.5 ORF5530 - 0.0075 16.1 1.7 0.0075 16.1 1.7 3.8 3 1 1 4 4 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase CPSase_L_D2 PF02786.17 ORF5530 - 0.11 11.9 0.3 0.2 11.1 0.2 1.4 1 1 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain DUF641 PF04859.12 ORF5530 - 0.51 10.7 10.7 4.6 7.6 2.1 2.4 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) bZIP_1 PF00170.21 ORF5530 - 1.8 8.7 17.8 1.5 9.0 7.0 3.2 2 2 1 3 3 3 0 bZIP transcription factor Prominin PF05478.11 ORF5530 - 2.3 6.1 10.0 1.2 7.0 7.5 1.7 1 1 1 2 2 2 0 Prominin Tropomyosin_1 PF12718.7 ORF5530 - 3.8 7.6 22.5 1.5 9.0 19.1 2.0 1 1 1 2 2 2 0 Tropomyosin like M PF02370.16 ORF5530 - 8.5 7.3 13.8 12 6.8 0.3 4.6 3 1 1 4 4 4 0 M protein repeat 7TM_GPCR_Srh PF10318.9 ORF53328 - 0.0004 19.5 0.6 0.00083 18.5 0.6 1.5 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srh SICA_alpha PF12887.7 ORF52390 - 0.091 12.6 10.4 0.05 13.5 6.5 2.0 2 0 0 2 2 2 0 SICA extracellular alpha domain DUF4337 PF14235.6 ORF52390 - 0.34 11.0 13.2 0.075 13.1 9.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) DUF1943 PF09172.11 ORF52390 - 0.8 8.9 12.5 1.4 8.1 11.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF1943) DUF4407 PF14362.6 ORF52390 - 9.9 5.4 8.7 12 5.1 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SID-1_RNA_chan PF13965.6 ORF52211 - 0.00057 18.4 0.1 0.00072 18.1 0.1 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 Neur_chan_memb PF02932.16 ORF52211 - 0.0021 18.1 0.5 0.0026 17.8 0.5 1.1 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel transmembrane region SpoIIIAH PF12685.7 ORF52211 - 0.0029 17.5 1.0 0.005 16.7 1.0 1.4 1 0 0 1 1 1 1 SpoIIIAH-like protein BUD22 PF09073.10 ORF52211 - 0.0041 16.5 12.2 0.0051 16.2 12.2 1.0 1 0 0 1 1 1 1 BUD22 DUF4134 PF13572.6 ORF52211 - 0.0066 16.7 0.1 0.0098 16.2 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4134) Apt1 PF10351.9 ORF52211 - 0.01 14.7 1.7 0.01 14.7 1.7 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF4064 PF13273.6 ORF52211 - 0.037 14.3 0.6 0.037 14.3 0.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) DUF3328 PF11807.8 ORF52211 - 0.047 13.5 0.3 0.061 13.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) Mem_trans PF03547.18 ORF52211 - 0.066 11.6 0.0 0.12 10.7 0.0 1.4 1 1 0 1 1 1 0 Membrane transport protein DUF1218 PF06749.12 ORF52211 - 0.067 13.7 0.0 0.096 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) EphA2_TM PF14575.6 ORF52211 - 0.071 14.0 0.1 0.18 12.7 0.1 1.8 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Hid1 PF12722.7 ORF52211 - 0.14 10.3 5.8 0.15 10.1 5.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Chordopox_A13L PF05961.11 ORF52211 - 0.2 11.9 0.0 0.2 11.9 0.0 2.6 1 1 1 2 2 2 0 Chordopoxvirus A13L protein ODV-E18 PF10717.9 ORF52211 - 0.76 9.7 2.4 0.6 10.0 0.2 1.9 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 SARAF PF06682.12 ORF52211 - 0.8 9.3 5.6 4.4 6.8 5.4 1.9 1 1 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis DUF913 PF06025.12 ORF52211 - 1.1 8.1 6.2 1.7 7.5 6.2 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF4834 PF16118.5 ORF52211 - 1.2 10.2 7.0 40 5.2 7.0 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) UPF0239 PF06783.11 ORF52211 - 1.8 8.8 0.0 1.8 8.8 0.0 3.1 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0239) Tim54 PF11711.8 ORF52211 - 4.8 5.9 15.2 6.9 5.4 15.2 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF5393 PF17371.2 ORF51726 - 0.14 10.3 0.6 0.17 10.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5393) ERM PF00769.19 ORF51477 - 0.0044 16.9 18.0 0.0057 16.5 18.0 1.2 1 0 0 1 1 1 1 Ezrin/radixin/moesin family TPR_MLP1_2 PF07926.12 ORF51477 - 0.0063 16.6 10.5 0.0063 16.6 10.5 2.9 1 1 1 2 2 2 1 TPR/MLP1/MLP2-like protein DUF4951 PF16309.5 ORF51477 - 0.056 13.5 4.0 0.066 13.3 3.1 1.6 1 1 0 1 1 1 0 Domian of unknown function (DUF4951) DUF1664 PF07889.12 ORF51477 - 0.057 13.4 14.3 0.067 13.2 8.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Jnk-SapK_ap_N PF09744.9 ORF51477 - 0.19 12.0 22.3 0.068 13.4 18.1 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DUF4140 PF13600.6 ORF51477 - 0.21 12.1 8.4 0.73 10.3 8.4 2.0 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF4200 PF13863.6 ORF51477 - 0.22 11.9 25.1 0.57 10.6 20.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) Apolipoprotein PF01442.18 ORF51477 - 0.32 10.9 14.0 0.56 10.1 14.0 1.5 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Spc7 PF08317.11 ORF51477 - 0.41 9.5 21.5 0.69 8.7 10.4 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein CENP-H PF05837.12 ORF51477 - 0.81 10.1 17.0 0.12 12.8 12.6 1.8 2 0 0 2 2 2 0 Centromere protein H (CENP-H) DUF1068 PF06364.12 ORF51477 - 0.84 9.5 6.4 1.3 8.9 6.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) Golgin_A5 PF09787.9 ORF51477 - 0.86 9.0 23.7 0.19 11.2 18.2 1.9 1 1 1 2 2 2 0 Golgin subfamily A member 5 Snapin_Pallidin PF14712.6 ORF51477 - 0.95 9.9 19.7 0.14 12.6 9.9 2.8 1 1 1 3 3 3 0 Snapin/Pallidin GIT_CC PF16559.5 ORF51477 - 0.96 9.4 13.5 1.7 8.6 2.8 2.4 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Prominin PF05478.11 ORF51477 - 1.1 7.2 12.0 1.2 7.0 12.0 1.0 1 0 0 1 1 1 0 Prominin PKcGMP_CC PF16808.5 ORF51477 - 1.2 9.1 0.1 0.29 11.0 0.8 4.4 5 0 0 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF1635 PF07795.11 ORF51477 - 1.2 9.0 14.5 1.3 8.8 14.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1635) Fib_alpha PF08702.10 ORF51477 - 1.3 9.2 21.8 0.45 10.7 14.5 2.7 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF4472 PF14739.6 ORF51477 - 1.3 9.8 17.9 0.42 11.4 14.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) Goodbye PF17109.5 ORF51477 - 1.3 9.5 7.0 4.2 7.9 2.6 2.2 1 1 1 2 2 2 0 fungal STAND N-terminal Goodbye domain ABC_tran_CTD PF16326.5 ORF51477 - 1.3 9.3 15.8 7.1 7.0 0.6 3.3 2 1 1 3 3 3 0 ABC transporter C-terminal domain Mt_ATP-synt_D PF05873.12 ORF51477 - 1.9 8.4 12.0 8.4 6.2 8.8 2.9 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) V_ATPase_I PF01496.19 ORF51477 - 3.3 5.5 14.6 3.6 5.4 14.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Csm1_N PF18504.1 ORF51477 - 3.5 8.0 24.7 3.1 8.2 0.6 4.2 2 2 2 4 4 4 0 Csm1 N-terminal domain APG6_N PF17675.1 ORF51477 - 4 8.0 18.8 6.1 7.4 17.3 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region MCU PF04678.13 ORF51477 - 5.1 7.2 9.7 6.6 6.8 9.3 1.5 1 1 0 1 1 1 0 Mitochondrial calcium uniporter Atg14 PF10186.9 ORF51477 - 5.9 5.9 21.6 11 5.0 21.6 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Syntaxin-6_N PF09177.11 ORF51477 - 6.2 7.5 13.7 11 6.7 12.4 2.2 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF4446 PF14584.6 ORF51477 - 6.6 6.7 13.8 0.52 10.3 4.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF2203 PF09969.9 ORF51477 - 8.8 7.1 12.2 2.1e+02 2.6 12.0 2.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Med9 PF07544.13 ORF51477 - 8.8 6.5 22.1 2.3 8.3 8.2 3.3 1 1 1 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 CxC6 PF18721.1 ORF50829 - 0.11 12.8 0.5 0.11 12.8 0.5 2.2 2 1 0 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases DUF2475 PF10629.9 ORF50600 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) Methyltransf_21 PF05050.12 ORF48467 - 0.0012 19.0 0.0 0.0013 18.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain MoCF_biosynth PF00994.24 ORF47845 - 6.4e-33 113.4 0.0 7.5e-33 113.2 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain DHHC PF01529.20 ORF46178 - 0.0057 16.8 6.8 0.01 15.9 6.8 1.5 1 0 0 1 1 1 1 DHHC palmitoyltransferase WBP-1 PF11669.8 ORF45001 - 0.35 11.5 1.5 0.7 10.6 1.5 1.5 1 0 0 1 1 1 0 WW domain-binding protein 1 Cortexin PF11057.8 ORF45001 - 1.3 8.9 4.9 2.2 8.2 4.9 1.4 1 0 0 1 1 1 0 Cortexin of kidney DUF2475 PF10629.9 ORF43945 - 0.00017 21.7 0.2 0.00041 20.5 0.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) COX2_TM PF02790.15 ORF43492 - 5.1 7.3 8.0 3.9 7.7 0.6 2.3 2 0 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain WD40 PF00400.32 ORF43178 - 6.1e-23 80.7 12.6 7.6e-07 29.7 0.2 4.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF43178 - 2e-08 34.4 0.1 0.0072 16.6 0.0 3.2 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain PALB2_WD40 PF16756.5 ORF43178 - 2e-05 23.7 0.5 8e-05 21.7 0.0 1.9 1 1 1 2 2 2 1 Partner and localizer of BRCA2 WD40 domain Ge1_WD40 PF16529.5 ORF43178 - 0.001 18.1 0.0 0.19 10.6 0.0 2.2 2 0 0 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 ORF43178 - 0.0033 16.8 0.0 0.0056 16.0 0.0 1.4 1 1 0 1 1 1 1 WD40-like domain PQQ_2 PF13360.6 ORF43178 - 0.0071 16.0 0.2 0.025 14.1 0.1 1.8 1 1 1 2 2 2 1 PQQ-like domain Nup160 PF11715.8 ORF43178 - 0.015 14.0 3.5 0.084 11.5 0.2 2.6 1 1 0 2 2 2 0 Nucleoporin Nup120/160 PQQ_3 PF13570.6 ORF43178 - 0.018 15.5 6.1 0.41 11.2 0.0 3.5 3 1 0 3 3 3 0 PQQ-like domain RAB3GAP2_N PF14655.6 ORF43178 - 0.2 10.9 0.0 3.5 6.8 0.0 2.1 2 0 0 2 2 2 0 Rab3 GTPase-activating protein regulatory subunit N-terminus Serglycin PF04360.12 ORF4182 - 0.25 11.3 4.0 0.78 9.7 0.1 2.3 2 1 0 2 2 2 0 Serglycin PP2C PF00481.21 ORF40642 - 4.7e-48 164.1 0.0 5.7e-48 163.8 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF40642 - 0.011 15.4 0.0 0.011 15.3 0.0 1.3 1 1 0 1 1 1 0 Protein phosphatase 2C SpoIIE PF07228.12 ORF40642 - 0.019 14.9 0.0 0.47 10.3 0.0 2.0 2 0 0 2 2 2 0 Stage II sporulation protein E (SpoIIE) CxC2 PF18803.1 ORF40642 - 0.036 14.2 0.1 0.062 13.5 0.1 1.3 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases 4HFCP_synth PF04476.13 ORF40642 - 0.066 12.9 0.0 0.093 12.4 0.0 1.2 1 0 0 1 1 1 0 4-HFC-P synthase PUB PF09409.10 ORF40368 - 6.3e-07 29.3 0.0 9.3e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 PUB domain UIM PF02809.20 ORF40368 - 0.086 12.8 4.3 0.16 12.0 4.3 1.5 1 0 0 1 1 1 0 Ubiquitin interaction motif 2OG-FeII_Oxy_2 PF13532.6 ORF40141 - 2.5e-05 24.6 0.0 0.0012 19.1 0.0 2.2 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily MscS_porin PF12795.7 ORF40141 - 0.097 12.2 0.7 0.13 11.8 0.7 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel porin domain RRM_1 PF00076.22 ORF38310 - 6.9e-08 32.2 0.0 8.9e-08 31.8 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF38310 - 0.0012 18.5 0.0 0.0018 17.9 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MG4 PF17789.1 ORF37713 - 0.11 12.7 0.8 0.19 11.9 0.8 1.7 1 1 0 1 1 1 0 Macroglobulin domain MG4 Pox_Ag35 PF03286.14 ORF37713 - 0.84 9.4 22.8 1.2 8.8 22.8 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein RRN3 PF05327.11 ORF37713 - 2.1 6.8 17.3 2.5 6.5 17.3 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 DUF3827 PF12877.7 ORF37713 - 9.9 4.4 15.0 12 4.1 15.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) MID_pPIWI_RE PF18157.1 ORF37608 - 0.021 15.1 1.0 0.033 14.5 0.5 1.8 1 1 1 2 2 2 0 MID domain of pPIWI_RE NUDIX PF00293.28 ORF35499 - 0.012 15.6 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 NUDIX domain DUF3391 PF11871.8 ORF34756 - 0.14 12.7 5.2 3 8.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) CDC45 PF02724.14 ORF34756 - 0.75 8.0 6.5 0.75 8.0 6.5 1.1 1 0 0 1 1 1 0 CDC45-like protein TERB2 PF15101.6 ORF34756 - 5.3 7.0 9.3 5.8 6.9 9.3 1.3 1 1 0 1 1 1 0 Telomere-associated protein TERB2 LRR_6 PF13516.6 ORF34106 - 2.4e-12 45.8 12.0 6.1e-06 25.9 0.3 5.2 5 0 0 5 5 5 4 Leucine Rich repeat CoA_trans PF01144.23 ORF30713 - 1.3e-23 83.5 0.0 1.6e-23 83.3 0.0 1.0 1 0 0 1 1 1 1 Coenzyme A transferase DUF2475 PF10629.9 ORF30067 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) Arf PF00025.21 ORF29597 - 2.2e-77 258.4 0.2 2.5e-77 258.3 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF29597 - 2.1e-14 53.8 0.0 2.8e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF29597 - 1.1e-13 51.0 0.0 1.4e-13 50.7 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF29597 - 2.2e-13 50.1 0.0 2.6e-13 49.9 0.0 1.0 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF29597 - 9.4e-12 44.8 0.4 8.3e-08 31.8 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF29597 - 2.4e-10 40.2 0.0 2.9e-10 39.9 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF29597 - 1.2e-05 25.4 0.0 1.9e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF29597 - 0.012 14.9 0.1 0.023 14.0 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF29597 - 0.014 15.5 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain Sulfotransfer_2 PF03567.14 ORF29591 - 4.5e-08 33.3 2.2 1e-06 28.9 2.2 2.1 1 1 0 1 1 1 1 Sulfotransferase family DHHC PF01529.20 ORF28945 - 0.0057 16.8 6.8 0.01 15.9 6.8 1.5 1 0 0 1 1 1 1 DHHC palmitoyltransferase HECW1_helix PF18436.1 ORF27125 - 0.13 12.4 0.7 1.5 9.0 0.1 2.4 2 0 0 2 2 2 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 DCB PF16213.5 ORF24668 - 0.00075 19.2 0.0 0.00083 19.1 0.0 1.1 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 Vac14_Fab1_bd PF12755.7 ORF24668 - 0.0053 17.3 0.2 0.12 13.0 0.0 2.6 1 1 1 2 2 2 1 Vacuolar 14 Fab1-binding region Cyclin PF08613.11 ORF23083 - 2.2e-10 41.1 2.9 3e-10 40.7 0.1 2.1 2 0 0 2 2 2 1 Cyclin DUF5538 PF17692.1 ORF21243 - 0.11 12.6 7.8 0.87 9.7 0.5 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5538) Thioredoxin PF00085.20 ORF19899 - 1.7e-16 60.1 0.0 2.5e-16 59.5 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_4 PF13462.6 ORF19899 - 0.0017 18.5 0.0 0.0033 17.6 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin TraF PF13728.6 ORF19899 - 0.0043 16.9 0.0 0.0057 16.5 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF19899 - 0.1 13.0 0.0 19 5.7 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin-like HypD PF01924.16 ORF17600 - 6.1e-63 213.0 0.0 6.8e-63 212.9 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family Methyltransf_9 PF08003.11 ORF17600 - 0.13 11.1 0.0 0.16 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) DCB PF16213.5 ORF16979 - 0.00075 19.2 0.0 0.00083 19.1 0.0 1.1 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 Vac14_Fab1_bd PF12755.7 ORF16979 - 0.0053 17.3 0.2 0.12 13.0 0.0 2.6 1 1 1 2 2 2 1 Vacuolar 14 Fab1-binding region DUF3304 PF11745.8 ORF1526 - 0.34 11.3 0.5 0.48 10.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3304) TauE PF01925.19 ORF14345 - 2.2e-09 37.3 12.2 2.6e-09 37.1 11.5 1.3 1 1 0 1 1 1 1 Sulfite exporter TauE/SafE Gtr1_RagA PF04670.12 ORF13540 - 1.2e-21 77.2 0.7 1.7e-21 76.6 0.4 1.4 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Herpes_UL33 PF03581.13 ORF13540 - 0.23 11.8 1.3 3.2 8.2 0.2 2.4 2 1 0 2 2 2 0 Herpesvirus UL33-like protein DUF4774 PF15999.5 ORF13251 - 0.23 11.3 9.5 0.33 10.8 1.3 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4774) His_Phos_1 PF00300.22 ORF12243 - 1e-05 25.3 0.0 8.5e-05 22.3 0.0 1.9 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) SAM35 PF10806.8 ORF111941 - 0.07 13.4 4.0 0.26 11.6 3.7 2.0 1 1 0 1 1 1 0 SAM35, subunit of SAM coomplex Peptidase_C50 PF03568.17 ORF111941 - 0.21 10.7 5.0 0.26 10.3 5.0 1.2 1 0 0 1 1 1 0 Peptidase family C50 Arv1 PF04161.13 ORF111347 - 0.57 10.3 5.0 0.78 9.9 5.0 1.1 1 0 0 1 1 1 0 Arv1-like family PRP21_like_P PF12230.8 ORF10660 - 0.017 15.0 0.6 0.021 14.7 0.6 1.1 1 0 0 1 1 1 0 Pre-mRNA splicing factor PRP21 like protein Peptidase_S9 PF00326.21 ORF104758 - 2.5e-09 36.9 1.2 5e-08 32.7 1.2 2.0 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF104758 - 9.1e-08 31.7 0.4 0.001 18.4 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Esterase_phd PF10503.9 ORF104758 - 5.9e-06 25.9 0.1 7.9e-06 25.5 0.1 1.1 1 0 0 1 1 1 1 Esterase PHB depolymerase Abhydrolase_2 PF02230.16 ORF104758 - 0.00031 20.6 0.5 0.0037 17.1 0.5 1.9 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase Esterase PF00756.20 ORF104758 - 0.00073 19.3 0.0 0.00089 19.0 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Abhydrolase_1 PF00561.20 ORF104758 - 0.041 13.5 0.8 0.082 12.5 0.5 1.4 1 1 1 2 2 2 0 alpha/beta hydrolase fold DLH PF01738.18 ORF104758 - 0.08 12.5 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Dienelactone hydrolase family APT PF03440.14 ORF104052 - 0.026 14.5 0.0 0.039 13.9 0.0 1.2 1 0 0 1 1 1 0 Aerolysin/Pertussis toxin (APT) domain DUF543 PF04418.12 NODE_40857_length_505_cov_1.725532_g33345_i0reverse_frame_1 - 0.091 12.8 0.2 0.16 12.0 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF543) Phage_holin_2_3 PF16080.5 NODE_40857_length_505_cov_1.725532_g33345_i0reverse_frame_1 - 0.11 12.2 0.5 0.21 11.4 0.5 1.4 1 0 0 1 1 1 0 Bacteriophage holin family HP1 FAR1 PF03101.15 NODE_40857_length_505_cov_1.725532_g33345_i0forward_frame_1 - 0.059 14.1 0.3 0.13 13.0 0.3 1.5 1 0 0 1 1 1 0 FAR1 DNA-binding domain AAA_11 PF13086.6 NODE_40851_length_505_cov_2.436170_g33339_i0forward_frame_1 - 1.2 8.8 14.4 1.6 8.5 14.4 1.2 1 0 0 1 1 1 0 AAA domain Hep_59 PF07052.11 NODE_40851_length_505_cov_2.436170_g33339_i0forward_frame_1 - 2.3 9.0 18.2 20 6.0 18.2 2.0 1 1 0 1 1 1 0 Hepatocellular carcinoma-associated antigen 59 DUF1672 PF07901.11 NODE_40845_length_505_cov_3.685106_g33333_i0reverse_frame_1 - 0.019 14.3 4.0 0.026 13.9 4.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1672) MKT1_N PF12247.8 NODE_40842_length_505_cov_4.197872_g33330_i0reverse_frame_1 - 0.034 14.5 0.0 0.062 13.7 0.0 1.5 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication HJURP_mid PF12346.8 NODE_40803_length_506_cov_1.723992_g33294_i0reverse_frame_1 - 0.047 14.1 0.6 0.071 13.6 0.6 1.3 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat Bystin PF05291.11 NODE_40799_length_506_cov_2.447983_g33290_i0forward_frame_1 - 0.024 14.0 0.3 0.032 13.5 0.3 1.1 1 0 0 1 1 1 0 Bystin LolB PF03550.14 NODE_40795_length_506_cov_2.976645_g33286_i0forward_frame_1 - 2.2e-18 66.8 0.2 3.2e-18 66.2 0.2 1.3 1 0 0 1 1 1 1 Outer membrane lipoprotein LolB ROK PF00480.20 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 3.9e-33 115.2 0.0 4.8e-33 114.9 0.0 1.1 1 0 0 1 1 1 1 ROK family Hydant_A_N PF05378.13 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 9.8e-05 22.1 0.2 0.00016 21.4 0.2 1.3 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region Glucokinase PF02685.16 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 0.0038 16.3 0.0 0.0047 16.0 0.0 1.1 1 0 0 1 1 1 1 Glucokinase BcrAD_BadFG PF01869.20 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 0.04 13.4 0.0 0.042 13.3 0.0 1.2 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family DEDD_Tnp_IS110 PF01548.17 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 0.053 13.4 0.0 0.074 12.9 0.0 1.2 1 0 0 1 1 1 0 Transposase Acetyltransf_6 PF13480.7 NODE_40784_length_506_cov_23.218684_g33275_i0forward_frame_1 - 0.096 12.8 8.1 0.18 11.9 8.1 1.4 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DUF4298 PF14131.6 NODE_40773_length_506_cov_85.866242_g33264_i0forward_frame_1 - 0.11 12.5 0.2 0.11 12.5 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) 7tm_7 PF08395.12 NODE_40771_length_506_cov_100.456476_g33262_i0forward_frame_1 - 0.037 13.2 0.1 0.074 12.2 0.1 1.4 1 0 0 1 1 1 0 7tm Chemosensory receptor InaF-motif PF15018.6 NODE_40763_length_506_cov_126.539278_g33254_i0reverse_frame_1 - 0.05 13.5 1.2 0.098 12.6 1.2 1.5 1 0 0 1 1 1 0 TRP-interacting helix DNA_RNApol_7kD PF03604.13 NODE_40747_length_507_cov_2.489407_g33239_i0forward_frame_1 - 0.034 13.8 0.6 0.36 10.5 0.1 2.5 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit TF_Zn_Ribbon PF08271.12 NODE_40747_length_507_cov_2.489407_g33239_i0forward_frame_1 - 0.043 13.3 0.5 2.1 7.9 0.0 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding Arm-DNA-bind_3 PF13356.6 NODE_40747_length_507_cov_2.489407_g33239_i0forward_frame_1 - 0.058 13.8 0.0 0.18 12.2 0.0 1.8 2 0 0 2 2 2 0 Arm DNA-binding domain Zn_ribbon_SprT PF17283.2 NODE_40747_length_507_cov_2.489407_g33239_i0forward_frame_1 - 0.098 12.6 1.0 8.5 6.4 0.1 2.4 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-C2H2_3 PF13878.6 NODE_40747_length_507_cov_2.489407_g33239_i0forward_frame_1 - 1.1 9.2 5.4 9 6.2 0.1 2.7 3 0 0 3 3 3 0 zinc-finger of acetyl-transferase ESCO Cyclin_N PF00134.23 NODE_40727_length_507_cov_96.347458_g33219_i0reverse_frame_1 - 6.6e-08 32.4 0.1 1.3e-07 31.4 0.0 1.6 2 1 0 2 2 2 1 Cyclin, N-terminal domain Tsi6 PF18660.1 NODE_40727_length_507_cov_96.347458_g33219_i0reverse_frame_1 - 0.0064 16.5 0.1 0.021 14.8 0.0 1.9 2 0 0 2 2 2 1 Tsi6 NPH3 PF03000.14 NODE_40727_length_507_cov_96.347458_g33219_i0reverse_frame_1 - 0.026 14.2 0.1 0.031 13.9 0.1 1.2 1 0 0 1 1 1 0 NPH3 family Fucose_iso_N2 PF07882.12 NODE_40727_length_507_cov_96.347458_g33219_i0reverse_frame_1 - 0.067 12.8 0.0 0.091 12.3 0.0 1.2 1 0 0 1 1 1 0 L-fucose isomerase, second N-terminal domain Microvir_lysis PF04517.12 NODE_40721_length_507_cov_117.506356_g28644_i1reverse_frame_1 - 0.012 15.6 1.6 1.6 8.7 0.3 2.5 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus mTERF PF02536.14 NODE_40721_length_507_cov_117.506356_g28644_i1forward_frame_1 - 1e-15 57.5 0.0 1.2e-15 57.3 0.0 1.1 1 0 0 1 1 1 1 mTERF HTH_3 PF01381.22 NODE_40721_length_507_cov_117.506356_g28644_i1forward_frame_1 - 0.022 14.8 0.0 11 6.1 0.0 3.3 3 0 0 3 3 3 0 Helix-turn-helix HTH_37 PF13744.6 NODE_40721_length_507_cov_117.506356_g28644_i1forward_frame_1 - 0.094 12.7 0.0 4.1 7.4 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Sp38 PF07354.12 NODE_40714_length_507_cov_203.961864_g33208_i0reverse_frame_1 - 0.0071 15.8 8.9 2 7.8 1.3 3.0 1 1 2 3 3 3 3 Zona-pellucida-binding protein (Sp38) zf_C2HC_14 PF18574.1 NODE_40713_length_507_cov_206.016949_g33207_i0reverse_frame_1 - 0.014 15.2 0.0 0.034 13.9 0.0 1.6 1 0 0 1 1 1 0 C2HC Zing finger domain Gin PF10764.9 NODE_40713_length_507_cov_206.016949_g33207_i0reverse_frame_1 - 5.1 7.1 7.4 6.8 6.7 0.7 2.7 3 0 0 3 3 3 0 Inhibitor of sigma-G Gin FHIPEP PF00771.20 NODE_40696_length_508_cov_2.374207_g33192_i0forward_frame_3 - 8.2e-18 64.2 0.0 9.3e-18 64.1 0.0 1.0 1 0 0 1 1 1 1 FHIPEP family ICAM_N PF03921.14 NODE_40686_length_508_cov_9.329810_g33182_i0reverse_frame_3 - 0.012 15.3 0.0 5.3 6.8 0.0 2.2 2 0 0 2 2 2 0 Intercellular adhesion molecule (ICAM), N-terminal domain DUF3693 PF12472.8 NODE_40686_length_508_cov_9.329810_g33182_i0reverse_frame_3 - 0.081 12.6 0.1 14 5.4 0.0 2.4 3 0 0 3 3 3 0 Phage related protein CdiI_N PF18228.1 NODE_40668_length_508_cov_115.591966_g33167_i0reverse_frame_2 - 0.054 13.3 0.1 0.089 12.6 0.1 1.3 1 0 0 1 1 1 0 CdiI N-terminal domain Ras PF00071.22 NODE_40662_length_508_cov_160.336152_g33161_i0reverse_frame_2 - 3.9e-22 78.6 0.1 5.7e-22 78.0 0.1 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_40662_length_508_cov_160.336152_g33161_i0reverse_frame_2 - 0.00036 20.7 0.1 0.0016 18.7 0.0 1.9 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_40662_length_508_cov_160.336152_g33161_i0reverse_frame_2 - 0.011 15.2 0.0 0.016 14.7 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 NODE_40662_length_508_cov_160.336152_g33161_i0reverse_frame_2 - 0.023 14.7 0.1 0.036 14.1 0.1 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain DASH_Spc19 PF08287.11 NODE_40662_length_508_cov_160.336152_g33161_i0reverse_frame_2 - 0.043 13.7 0.0 0.07 13.0 0.0 1.3 1 0 0 1 1 1 0 Spc19 MgtE PF01769.16 NODE_40657_length_508_cov_209.414376_g33156_i0reverse_frame_3 - 0.076 13.4 5.1 0.12 12.8 5.1 1.3 1 0 0 1 1 1 0 Divalent cation transporter DUF2213 PF09979.9 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_2 - 0.0073 16.3 0.2 0.011 15.8 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2213) DUF87 PF01935.17 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_2 - 0.052 13.6 3.6 0.065 13.3 3.6 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain DUF1690 PF07956.11 NODE_40657_length_508_cov_209.414376_g33156_i0forward_frame_2 - 1.5 9.2 15.3 0.71 10.3 13.2 1.5 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) Dynamitin PF04912.14 NODE_40652_length_508_cov_307.716702_g33151_i0reverse_frame_3 - 0.024 14.0 5.9 0.029 13.7 5.9 1.1 1 0 0 1 1 1 0 Dynamitin Cwf_Cwc_15 PF04889.12 NODE_40652_length_508_cov_307.716702_g33151_i0reverse_frame_3 - 0.051 13.3 4.8 0.06 13.1 4.8 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DUF3752 PF12572.8 NODE_40652_length_508_cov_307.716702_g33151_i0reverse_frame_3 - 0.094 13.2 2.8 0.11 13.0 2.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3752) DUF3886 PF13025.6 NODE_40652_length_508_cov_307.716702_g33151_i0reverse_frame_3 - 0.5 10.6 8.6 1.1 9.5 8.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3886) DUF4140 PF13600.6 NODE_40652_length_508_cov_307.716702_g33151_i0reverse_frame_3 - 0.6 10.6 8.9 0.23 11.9 6.1 1.7 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Pkinase PF00069.25 NODE_40641_length_509_cov_1.968354_g33142_i0reverse_frame_3 - 0.0089 15.4 0.0 0.012 15.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase PF00069.25 NODE_40641_length_509_cov_1.968354_g33142_i0reverse_frame_2 - 0.0011 18.3 0.0 0.0012 18.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Myb_DNA-binding PF00249.31 NODE_40639_length_509_cov_2.341772_g33140_i0reverse_frame_3 - 1.4e-11 44.3 1.7 2.1e-11 43.8 1.7 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_40639_length_509_cov_2.341772_g33140_i0reverse_frame_3 - 6.5e-09 35.9 0.5 1.1e-08 35.1 0.5 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain SLIDE PF09111.10 NODE_40639_length_509_cov_2.341772_g33140_i0reverse_frame_3 - 0.013 15.5 0.0 0.02 14.9 0.0 1.3 1 0 0 1 1 1 0 SLIDE MT-A70 PF05063.14 NODE_40633_length_509_cov_3.286920_g33134_i0reverse_frame_3 - 1.2e-18 67.6 1.8 8.1e-17 61.7 1.8 2.2 1 1 0 1 1 1 1 MT-A70 RVT_N PF13655.6 NODE_40629_length_509_cov_3.989451_g33130_i0reverse_frame_3 - 0.019 15.2 0.1 0.037 14.3 0.1 1.4 1 0 0 1 1 1 0 N-terminal domain of reverse transcriptase NPBW PF15180.6 NODE_40629_length_509_cov_3.989451_g33130_i0forward_frame_2 - 0.013 15.4 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Neuropeptides B and W DUF5553 PF17707.1 NODE_40629_length_509_cov_3.989451_g33130_i0forward_frame_2 - 0.022 14.2 0.0 0.035 13.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5553) Tat PF00539.18 NODE_40625_length_509_cov_57.303797_g33126_i0forward_frame_3 - 0.85 9.8 8.1 6.2 7.1 0.9 2.3 2 0 0 2 2 2 0 Transactivating regulatory protein (Tat) zf-rbx1 PF12678.7 NODE_40622_length_509_cov_70.578059_g33123_i0reverse_frame_3 - 0.012 15.9 0.2 0.02 15.2 0.2 1.3 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_40622_length_509_cov_70.578059_g33123_i0reverse_frame_3 - 0.022 14.6 0.1 0.035 14.0 0.1 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_40622_length_509_cov_70.578059_g33123_i0reverse_frame_3 - 0.034 14.0 0.2 0.056 13.3 0.2 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 NODE_40622_length_509_cov_70.578059_g33123_i0reverse_frame_3 - 0.04 14.1 0.4 0.062 13.5 0.4 1.3 1 0 0 1 1 1 0 FANCL C-terminal domain zf-RING_2 PF13639.6 NODE_40622_length_509_cov_70.578059_g33123_i0reverse_frame_3 - 0.092 13.1 0.2 0.14 12.5 0.2 1.3 1 0 0 1 1 1 0 Ring finger domain AAA PF00004.29 NODE_40613_length_509_cov_92.898734_g33114_i0reverse_frame_2 - 3.3e-18 66.4 0.1 5.7e-18 65.6 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 NODE_40613_length_509_cov_92.898734_g33114_i0reverse_frame_2 - 0.0034 17.2 0.0 0.0064 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA+ lid domain HpaP PF09483.10 NODE_40613_length_509_cov_92.898734_g33114_i0reverse_frame_2 - 0.039 14.2 0.1 0.09 13.0 0.1 1.7 1 0 0 1 1 1 0 Type III secretion protein (HpaP) Ribosomal_L12 PF00542.19 NODE_40608_length_509_cov_104.974684_g33109_i0reverse_frame_3 - 1.3e-18 67.1 6.9 1.7e-18 66.7 6.9 1.2 1 0 0 1 1 1 1 Ribosomal protein L7/L12 C-terminal domain GCS2 PF04107.13 NODE_40608_length_509_cov_104.974684_g33109_i0reverse_frame_3 - 0.036 13.4 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) IMPDH PF00478.25 NODE_40608_length_509_cov_104.974684_g33109_i0reverse_frame_2 - 0.16 10.9 0.0 0.19 10.7 0.0 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Phe_ZIP PF08916.11 NODE_40594_length_509_cov_558.710970_g33097_i0reverse_frame_2 - 0.011 16.4 10.0 6.8 7.5 0.4 4.0 4 0 0 4 4 4 0 Phenylalanine zipper MNR PF15718.5 NODE_40583_length_510_cov_1.709474_g33088_i0forward_frame_2 - 0.0061 14.8 5.3 0.0073 14.5 5.3 1.0 1 0 0 1 1 1 1 Protein moonraker Phage_tail_3 PF08813.11 NODE_40583_length_510_cov_1.709474_g33088_i0forward_frame_2 - 0.086 12.4 0.5 0.12 11.9 0.5 1.3 1 0 0 1 1 1 0 Phage tail tube protein, TTP PSII_Pbs27 PF13326.6 NODE_40583_length_510_cov_1.709474_g33088_i0forward_frame_2 - 0.97 9.7 6.1 2 8.7 5.5 1.9 1 1 1 2 2 2 0 Photosystem II Pbs27 ITI_HC_C PF06668.12 NODE_40578_length_510_cov_3.221053_g33083_i0reverse_frame_2 - 0.06 13.0 0.7 0.06 13.0 0.7 1.6 1 1 1 2 2 2 0 Inter-alpha-trypsin inhibitor heavy chain C-terminus Lys_export PF03956.13 NODE_40577_length_510_cov_3.261053_g33082_i0forward_frame_3 - 1.3e-08 34.6 11.2 8.2e-07 28.7 1.1 2.1 2 0 0 2 2 2 2 Lysine exporter LysO DUF4079 PF13301.6 NODE_40577_length_510_cov_3.261053_g33082_i0forward_frame_3 - 1.1 9.4 6.4 0.4 10.8 3.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) Pep1_7 PF17232.2 NODE_40574_length_510_cov_15.898947_g33079_i0reverse_frame_2 - 0.065 13.7 0.1 0.14 12.7 0.1 1.5 1 0 0 1 1 1 0 Elicitor peptide 1-7 OAD_gamma PF04277.13 NODE_40567_length_510_cov_79.576842_g33072_i0reverse_frame_3 - 0.14 12.8 0.8 0.22 12.2 0.1 1.8 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain YajC PF02699.15 NODE_40567_length_510_cov_79.576842_g33072_i0reverse_frame_3 - 1.6 8.6 4.5 0.56 10.1 1.2 1.8 2 0 0 2 2 2 0 Preprotein translocase subunit Chromadorea_ALT PF05535.12 NODE_40567_length_510_cov_79.576842_g33072_i0forward_frame_2 - 0.04 14.1 4.0 0.075 13.2 0.4 2.2 2 0 0 2 2 2 0 Chromadorea ALT protein DUF1700 PF08006.11 NODE_40567_length_510_cov_79.576842_g33072_i0forward_frame_2 - 0.71 9.4 6.4 1.1 8.8 6.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1700) DUF4188 PF13826.6 NODE_40563_length_510_cov_88.930526_g33068_i0forward_frame_3 - 0.071 13.5 0.5 2.2 8.6 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4188) PRMT5_C PF17286.2 NODE_40559_length_510_cov_109.981053_g33064_i0forward_frame_3 - 0.013 15.4 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 PRMT5 oligomerisation domain SMN PF06003.12 NODE_40544_length_510_cov_221.947368_g33050_i0reverse_frame_3 - 0.75 9.0 8.0 1.1 8.4 8.0 1.2 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) TAP_C PF03943.13 ORF98319 - 0.014 15.0 0.7 0.037 13.7 0.7 1.9 1 1 0 1 1 1 0 TAP C-terminal domain zf-Tim10_DDP PF02953.15 ORF97831 - 1.3e-05 24.8 1.6 3.1e-05 23.5 1.6 1.7 1 0 0 1 1 1 1 Tim10/DDP family zinc finger NADHdh PF00146.21 ORF96594 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF96594 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) DUF2523 PF10734.9 ORF95249 - 0.075 13.6 0.2 0.075 13.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2523) Sarcoglycan_2 PF05510.13 ORF94274 - 0.012 14.4 0.1 0.017 13.9 0.1 1.4 1 0 0 1 1 1 0 Sarcoglycan alpha/epsilon Amidase PF01425.21 ORF94193 - 2.1e-41 142.3 0.0 3e-41 141.8 0.0 1.2 1 0 0 1 1 1 1 Amidase Pkinase PF00069.25 ORF92398 - 9.7e-16 57.9 0.0 1.4e-15 57.3 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92398 - 1.5e-05 24.4 0.0 2.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2207 PF09972.9 ORF92271 - 0.0024 16.7 0.0 0.0026 16.6 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) ETRAMP PF09716.10 ORF92271 - 0.0031 17.5 0.5 0.0054 16.8 0.5 1.4 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Membralin PF09746.9 ORF92271 - 0.0077 15.3 2.5 0.0077 15.3 2.5 1.4 1 1 0 1 1 1 1 Tumour-associated protein DUF4448 PF14610.6 ORF92271 - 0.05 13.4 0.0 0.062 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) Aurora-A_bind PF09041.10 ORF92271 - 0.12 12.5 0.6 0.36 10.9 1.0 1.6 2 0 0 2 2 2 0 Aurora-A binding DUF4492 PF14899.6 ORF92271 - 1.4 8.9 5.9 1.6 8.7 3.3 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4492) Orf78 PF06024.12 ORF92271 - 1.9 8.8 4.3 2.1 8.7 1.0 2.3 2 1 0 2 2 2 0 Orf78 (ac78) PAN_4 PF14295.6 ORF92064 - 0.0002 21.2 0.2 0.00035 20.4 0.2 1.4 1 0 0 1 1 1 1 PAN domain PAN_1 PF00024.26 ORF92064 - 0.0053 16.7 0.4 0.008 16.1 0.4 1.3 1 0 0 1 1 1 1 PAN domain EF-hand_7 PF13499.6 ORF90309 - 2.4e-31 108.0 10.4 2.7e-16 59.7 2.8 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF90309 - 3.2e-31 104.5 15.0 1.1e-08 34.0 1.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF90309 - 5.3e-27 91.4 10.2 2.3e-08 33.3 0.1 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF90309 - 8e-23 80.0 12.9 1.1e-09 38.0 0.7 4.1 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF90309 - 1.1e-14 54.5 0.7 5.2e-07 29.9 0.1 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF90309 - 4.1e-14 51.3 13.6 0.00018 20.9 2.3 4.5 4 0 0 4 4 4 3 EF hand Caleosin PF05042.13 ORF90309 - 7.2e-05 22.8 1.0 2.2 8.2 0.0 3.9 1 1 3 4 4 4 1 Caleosin related protein EF-hand_4 PF12763.7 ORF90309 - 0.00012 22.0 5.8 0.043 13.8 0.1 2.6 1 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_14 PF17959.1 ORF90309 - 0.00019 21.7 1.8 0.33 11.3 0.5 2.5 1 1 0 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF90309 - 0.0037 17.5 2.2 1.1 9.6 0.3 2.2 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region SurA_N_2 PF13623.6 ORF90309 - 0.0041 17.0 1.1 0.25 11.2 0.1 2.5 2 1 0 2 2 2 1 SurA N-terminal domain Gp-FAR-1 PF05823.12 ORF90309 - 0.0087 16.4 3.2 0.54 10.6 0.1 2.8 2 1 1 3 3 3 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) FlgD PF03963.14 ORF90309 - 0.075 13.4 0.1 0.21 11.9 0.0 1.8 2 0 0 2 2 2 0 Flagellar hook capping protein - N-terminal region Dockerin_1 PF00404.18 ORF90309 - 0.2 11.9 2.5 1.7 8.9 0.3 2.6 2 1 1 3 3 3 0 Dockerin type I domain MgtE_N PF03448.17 ORF90309 - 0.33 11.6 3.6 0.69 10.6 1.0 2.3 2 0 0 2 2 2 0 MgtE intracellular N domain Defensin_1 PF00323.19 ORF87937 - 0.11 13.1 0.1 0.23 12.1 0.1 1.6 1 0 0 1 1 1 0 Mammalian defensin Gloverin PF10793.9 ORF87937 - 0.19 11.6 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Gloverin-like protein Peptidase_C1 PF00112.23 ORF8732 - 9.3e-14 52.0 0.1 1.1e-13 51.8 0.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF8732 - 0.00031 19.6 0.1 0.00077 18.3 0.0 1.6 2 0 0 2 2 2 1 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF8732 - 0.00076 20.0 0.0 0.0012 19.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase_C39 like family DUF2207 PF09972.9 ORF86217 - 0.0024 16.7 0.0 0.0026 16.6 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) ETRAMP PF09716.10 ORF86217 - 0.0031 17.5 0.5 0.0054 16.8 0.5 1.4 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Membralin PF09746.9 ORF86217 - 0.0077 15.3 2.5 0.0077 15.3 2.5 1.4 1 1 0 1 1 1 1 Tumour-associated protein DUF4448 PF14610.6 ORF86217 - 0.05 13.4 0.0 0.062 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) Aurora-A_bind PF09041.10 ORF86217 - 0.12 12.5 0.6 0.36 10.9 1.0 1.6 2 0 0 2 2 2 0 Aurora-A binding DUF4492 PF14899.6 ORF86217 - 1.4 8.9 5.9 1.6 8.7 3.3 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4492) Orf78 PF06024.12 ORF86217 - 1.9 8.8 4.3 2.1 8.7 1.0 2.3 2 1 0 2 2 2 0 Orf78 (ac78) zf-LITAF-like PF10601.9 ORF85492 - 1e-15 57.7 8.4 1.3e-15 57.3 8.4 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain PyrI_C PF02748.15 ORF85492 - 0.0085 16.0 4.6 2.7 8.0 0.0 2.5 2 0 0 2 2 2 2 Aspartate carbamoyltransferase regulatory chain, metal binding domain PriA_CRR PF18319.1 ORF85492 - 0.012 15.6 5.9 1.2 9.2 0.8 2.4 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain zf-FCS PF06467.14 ORF85492 - 0.037 14.0 3.0 3.4 7.7 0.1 2.6 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Ion_trans_2 PF07885.16 ORF84898 - 7.7e-10 38.6 3.2 1.1e-09 38.1 3.2 1.2 1 0 0 1 1 1 1 Ion channel EF-hand_1 PF00036.32 ORF84898 - 3.2e-08 32.6 1.3 0.00051 19.4 0.2 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF84898 - 3.5e-08 33.2 0.5 0.005 16.7 0.6 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF84898 - 1.2e-07 31.1 1.9 0.00041 20.0 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF84898 - 6.6e-07 29.7 4.9 6e-06 26.6 2.2 1.9 1 1 1 2 2 2 2 EF-hand domain pair Ion_trans PF00520.31 ORF84898 - 3.8e-06 26.3 1.2 4.9e-06 26.0 1.2 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_10 PF14788.6 ORF84898 - 0.0051 16.7 0.2 0.0076 16.1 0.2 1.2 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 ORF84898 - 0.017 14.6 1.8 0.37 10.4 0.1 2.4 2 0 0 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF84898 - 0.071 13.1 0.3 11 6.1 0.0 2.2 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand TPR_12 PF13424.6 ORF84708 - 0.0022 18.3 6.5 0.4 11.0 0.2 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF84708 - 0.076 13.7 9.6 6.2 7.8 0.1 3.0 2 1 0 2 2 2 0 Tetratricopeptide repeat CD225 PF04505.12 ORF84708 - 0.079 13.1 2.5 1.5 9.0 0.3 2.3 2 0 0 2 2 2 0 Interferon-induced transmembrane protein TPR_2 PF07719.17 ORF84708 - 0.12 12.6 7.4 0.29 11.4 1.8 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF84708 - 0.45 11.5 8.6 3.9 8.5 3.3 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF84708 - 1.7 9.4 6.2 0.6 10.9 1.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat HemY_N PF07219.13 ORF84708 - 7.3 6.8 9.5 15 5.9 0.2 2.2 1 1 1 2 2 2 0 HemY protein N-terminus Acyltransferase PF01553.21 ORF84474 - 0.0018 17.9 0.0 0.0028 17.3 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase Nif11 PF07862.11 ORF83325 - 0.025 14.9 0.1 0.072 13.4 0.0 1.8 2 0 0 2 2 2 0 Nif11 domain Pkinase PF00069.25 ORF83174 - 0.00011 21.7 0.1 0.00016 21.1 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain IF2_N PF04760.15 ORF83174 - 0.09 12.6 0.1 0.22 11.4 0.1 1.7 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region Lectin_C PF00059.21 ORF83033 - 1.2e-16 61.4 2.6 1.5e-16 61.1 2.6 1.1 1 0 0 1 1 1 1 Lectin C-type domain Peptidase_C1 PF00112.23 ORF80344 - 8.6e-14 52.1 0.2 1e-13 51.9 0.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF80344 - 0.00053 18.9 0.4 0.00077 18.3 0.2 1.4 1 1 0 1 1 1 1 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF80344 - 0.00071 20.1 0.0 0.0011 19.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase_C39 like family NADHdh PF00146.21 ORF80180 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF80180 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) Aminotran_3 PF00202.21 ORF79750 - 4.9e-46 157.2 0.0 5.4e-46 157.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Actin PF00022.19 ORF79614 - 1.7e-38 132.3 0.0 1.8e-38 132.2 0.0 1.0 1 0 0 1 1 1 1 Actin WD40 PF00400.32 ORF79570 - 8.8e-15 54.9 0.1 3.4e-07 30.9 0.1 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat CEP19 PF14933.6 ORF79570 - 3.5e-05 24.2 0.1 4.6e-05 23.8 0.1 1.1 1 0 0 1 1 1 1 CEP19-like protein DUF443 PF04276.12 ORF78915 - 0.11 12.3 0.5 0.15 11.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF443) NADHdh PF00146.21 ORF78868 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF78868 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) Transpeptidase PF00905.22 ORF78268 - 1e-28 100.5 0.1 1.2e-28 100.2 0.1 1.0 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain Clathrin PF00637.20 ORF78268 - 0.2 11.5 0.0 0.28 11.0 0.0 1.2 1 0 0 1 1 1 0 Region in Clathrin and VPS GspH PF12019.8 ORF75578 - 7.9e-10 39.1 0.1 1.1e-09 38.6 0.1 1.2 1 0 0 1 1 1 1 Type II transport protein GspH N_methyl PF07963.12 ORF75578 - 3.2e-06 26.5 2.8 6e-06 25.6 2.8 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif DUF1737 PF08410.10 ORF74759 - 0.083 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1737) Pep_deformylase PF01327.21 ORF72997 - 1.4e-50 171.0 0.1 1.6e-50 170.8 0.1 1.1 1 0 0 1 1 1 1 Polypeptide deformylase Tctex-1 PF03645.13 ORF72461 - 1.5e-12 47.6 0.0 2.4e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 Tctex-1 family DnaJ PF00226.31 ORF70798 - 2.2e-06 27.7 0.0 4.2e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 DnaJ domain Mhr1 PF12829.7 ORF70798 - 0.18 11.9 0.2 0.18 11.9 0.2 1.9 2 1 0 2 2 2 0 Transcriptional regulation of mitochondrial recombination CAP_N PF01213.19 ORF70798 - 0.33 10.4 8.5 0.63 9.5 8.5 1.5 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Gp_dh_N PF00044.24 ORF70710 - 0.74 10.2 4.0 0.64 10.4 1.9 1.9 1 1 1 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Spc7 PF08317.11 ORF70710 - 1.1 8.1 24.9 1.5 7.6 24.9 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Seryl_tRNA_N PF02403.22 ORF70710 - 1.2 9.4 24.7 1.4 9.2 14.2 2.4 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Lebercilin PF15619.6 ORF70710 - 2 8.0 32.0 5.3 6.6 32.0 1.6 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease CSN5_C PF18323.1 ORF70710 - 3.1 8.8 12.9 1 10.3 2.6 3.2 2 1 1 3 3 3 0 Cop9 signalosome subunit 5 C-terminal domain Pkinase PF00069.25 ORF7036 - 6.5e-38 130.6 0.1 7.4e-38 130.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7036 - 1.3e-23 83.7 0.0 1.4e-23 83.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF7036 - 9.1e-09 35.0 0.0 1.2e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF7036 - 4.8e-05 22.3 0.0 5.9e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF7036 - 0.047 12.6 0.0 0.08 11.9 0.0 1.3 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 ORF7036 - 0.14 11.4 0.1 0.23 10.8 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family AIRC PF00731.20 ORF70340 - 8.1e-64 213.7 1.0 9.2e-64 213.5 1.0 1.0 1 0 0 1 1 1 1 AIR carboxylase RraB PF06877.11 ORF70340 - 0.078 13.7 0.0 0.14 12.9 0.0 1.3 1 0 0 1 1 1 0 Regulator of ribonuclease activity B PrpR_N PF06506.11 ORF70340 - 0.11 12.0 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Propionate catabolism activator DUF2201 PF09967.9 ORF70340 - 0.12 12.5 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 VWA-like domain (DUF2201) MFMR PF07777.11 ORF70340 - 0.24 11.9 1.3 14 6.3 0.1 2.5 2 1 1 3 3 3 0 G-box binding protein MFMR Pkinase PF00069.25 ORF70334 - 6.5e-38 130.6 0.1 7.4e-38 130.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70334 - 1.3e-23 83.7 0.0 1.4e-23 83.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF70334 - 9.1e-09 35.0 0.0 1.2e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF70334 - 4.8e-05 22.3 0.0 5.9e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF70334 - 0.047 12.6 0.0 0.08 11.9 0.0 1.3 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 ORF70334 - 0.14 11.4 0.1 0.23 10.8 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_5 PF13202.6 ORF68677 - 0.16 11.5 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 EF hand EF-hand_1 PF00036.32 ORF68677 - 0.21 11.2 0.0 0.37 10.4 0.0 1.4 1 0 0 1 1 1 0 EF hand Pkinase PF00069.25 ORF67985 - 6.5e-38 130.6 0.1 7.4e-38 130.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67985 - 1.3e-23 83.7 0.0 1.4e-23 83.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF67985 - 9.1e-09 35.0 0.0 1.2e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF67985 - 4.8e-05 22.3 0.0 5.9e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF67985 - 0.047 12.6 0.0 0.08 11.9 0.0 1.3 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 ORF67985 - 0.14 11.4 0.1 0.23 10.8 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family AhpC-TSA PF00578.21 ORF67872 - 1.5e-24 86.2 0.0 2.3e-24 85.7 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.9 ORF67872 - 1.1e-12 47.6 0.0 1.8e-12 46.9 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.10 ORF67872 - 2.8e-10 40.1 0.0 3.3e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 ORF67872 - 0.015 15.6 0.0 0.022 15.1 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like DUF4748 PF15932.5 ORF6304 - 7.4 6.4 6.4 1.8 8.4 2.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4748) IF4E PF01652.18 ORF6201 - 2.4e-21 76.2 1.7 3.5e-21 75.6 1.7 1.2 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E DUF4441 PF14536.6 ORF60056 - 0.027 14.7 9.0 0.083 13.1 9.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) PutA_N PF18083.1 ORF60056 - 0.1 12.6 0.4 0.52 10.3 0.1 2.2 1 1 1 2 2 2 0 Proline utilization A N-terminal domain NLRC4_HD PF17889.1 ORF60056 - 0.14 12.5 0.1 0.14 12.5 0.1 2.3 2 1 1 3 3 3 0 NLRC4 helical domain Band_7 PF01145.25 ORF57763 - 9.8e-11 42.0 0.0 1.1e-10 41.8 0.0 1.0 1 0 0 1 1 1 1 SPFH domain / Band 7 family Peptidase_A21 PF03566.13 ORF57763 - 0.13 10.5 0.0 0.15 10.3 0.0 1.1 1 0 0 1 1 1 0 Peptidase family A21 HATPase_c PF02518.26 ORF57495 - 1.4e-09 38.4 0.0 9.5e-09 35.8 0.0 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF57495 - 0.0034 17.2 0.0 0.0044 16.8 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EF-hand_13 PF17958.1 ORF57336 - 0.057 13.2 0.3 0.84 9.5 0.1 2.4 2 1 1 3 3 3 0 EF-hand domain RPAP2_Rtr1 PF04181.13 ORF57336 - 0.08 13.3 0.1 0.15 12.4 0.1 1.4 1 0 0 1 1 1 0 Rtr1/RPAP2 family Ceramidase PF05875.12 ORF5651 - 5.5e-18 65.3 10.3 6.8e-18 65.0 10.3 1.1 1 0 0 1 1 1 1 Ceramidase DUF2721 PF11026.8 ORF5651 - 0.84 9.5 6.9 0.31 10.9 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) Erg28 PF03694.13 ORF55189 - 0.076 13.4 1.0 0.14 12.6 1.0 1.5 1 0 0 1 1 1 0 Erg28 like protein Ribosomal_S18 PF01084.20 ORF54425 - 1.5e-14 53.9 0.2 2.5e-14 53.2 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein S18 VraX PF17412.2 ORF53985 - 0.03 14.0 0.4 0.084 12.5 0.0 1.9 2 0 0 2 2 2 0 Family of unknown function Myb_DNA-bind_3 PF12776.7 ORF53985 - 1.4 10.0 5.8 1.4 10.0 2.0 2.1 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain DUF4441 PF14536.6 ORF53512 - 0.027 14.7 9.0 0.083 13.1 9.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) PutA_N PF18083.1 ORF53512 - 0.1 12.6 0.4 0.52 10.3 0.1 2.2 1 1 1 2 2 2 0 Proline utilization A N-terminal domain NLRC4_HD PF17889.1 ORF53512 - 0.14 12.5 0.1 0.14 12.5 0.1 2.3 2 1 1 3 3 3 0 NLRC4 helical domain PAS_6 PF08348.11 ORF52581 - 0.057 13.3 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 YheO-like PAS domain DUF4441 PF14536.6 ORF52351 - 0.027 14.7 9.0 0.083 13.1 9.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) PutA_N PF18083.1 ORF52351 - 0.1 12.6 0.4 0.52 10.3 0.1 2.2 1 1 1 2 2 2 0 Proline utilization A N-terminal domain NLRC4_HD PF17889.1 ORF52351 - 0.14 12.5 0.1 0.14 12.5 0.1 2.3 2 1 1 3 3 3 0 NLRC4 helical domain NADHdh PF00146.21 ORF51720 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF51720 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) Ank_2 PF12796.7 ORF51414 - 3e-28 98.2 1.0 1.2e-17 64.3 0.3 2.7 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF51414 - 1.2e-26 92.0 2.7 5e-05 23.6 0.1 5.1 5 0 0 5 5 5 5 Ankyrin repeat Ank_4 PF13637.6 ORF51414 - 7.2e-24 83.8 0.5 2.4e-08 34.4 0.0 4.1 2 2 1 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF51414 - 3e-20 72.0 2.6 3.5e-06 27.2 0.1 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF51414 - 3.2e-20 70.1 0.0 0.00016 21.8 0.0 5.1 5 0 0 5 5 5 4 Ankyrin repeat PK_C PF02887.16 ORF51414 - 0.01 16.1 0.1 0.79 10.0 0.1 2.8 2 1 0 2 2 2 0 Pyruvate kinase, alpha/beta domain Phage_tail_2 PF06199.11 ORF51414 - 0.023 14.8 0.8 5.3 7.1 0.0 3.0 1 1 1 3 3 3 0 Phage tail tube protein SufE PF02657.15 ORF51414 - 0.18 11.7 0.5 6.1 6.7 0.1 2.8 1 1 2 3 3 3 0 Fe-S metabolism associated domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks126.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks126.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks126.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks126.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_1 PF07690.16 ORF50751 - 7.7e-07 28.3 21.4 9.5e-07 28.1 21.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily O-ag_pol_Wzy PF14296.6 ORF50751 - 0.015 14.0 2.6 0.018 13.7 2.6 1.2 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy DUF412 PF04217.13 ORF50751 - 0.16 11.9 0.7 0.33 10.9 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF412 Peptidase_C1 PF00112.23 ORF49963 - 6.2e-14 52.6 0.2 7.4e-14 52.4 0.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF49963 - 0.00027 19.8 0.5 0.00038 19.4 0.3 1.4 1 1 0 1 1 1 1 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF49963 - 0.00064 20.3 0.0 0.0011 19.6 0.0 1.4 1 0 0 1 1 1 1 Peptidase_C39 like family MORN PF02493.20 ORF49870 - 4.1e-17 61.0 28.8 0.00037 20.2 1.2 6.8 7 0 0 7 7 7 5 MORN repeat Tudor_2 PF18104.1 ORF49870 - 0.06 13.0 7.7 1.3 8.7 0.0 3.7 4 1 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain Gp_dh_N PF00044.24 ORF49752 - 0.74 10.2 4.0 0.64 10.4 1.9 1.9 1 1 1 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Spc7 PF08317.11 ORF49752 - 1.1 8.1 24.9 1.5 7.6 24.9 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Seryl_tRNA_N PF02403.22 ORF49752 - 1.2 9.4 24.7 1.4 9.2 14.2 2.4 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Lebercilin PF15619.6 ORF49752 - 2 8.0 32.0 5.3 6.6 32.0 1.6 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease CSN5_C PF18323.1 ORF49752 - 3.1 8.8 12.9 1 10.3 2.6 3.2 2 1 1 3 3 3 0 Cop9 signalosome subunit 5 C-terminal domain Thioredoxin PF00085.20 ORF49413 - 6.2e-07 29.4 0.1 1.9e-06 27.8 0.0 1.8 2 1 0 2 2 2 1 Thioredoxin DLP_helical PF18709.1 ORF49413 - 0.029 13.6 2.4 0.038 13.2 2.4 1.2 1 0 0 1 1 1 0 Dynamin-like helical domain EGF_alliinase PF04863.13 ORF49413 - 0.065 13.7 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Alliinase EGF-like domain Cep57_CLD_2 PF14197.6 ORF49413 - 0.082 13.0 2.2 0.18 11.9 2.2 1.6 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 Uso1_p115_C PF04871.13 ORF49413 - 0.18 12.2 10.7 0.27 11.6 10.7 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region TMF_DNA_bd PF12329.8 ORF49413 - 4.6 7.3 18.6 15 5.7 12.4 3.2 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Torus PF16131.5 ORF47893 - 0.0083 16.8 0.5 0.012 16.3 0.5 1.3 1 0 0 1 1 1 1 Torus domain zf-CCCH PF00642.24 ORF47893 - 0.031 14.2 2.5 0.057 13.3 2.5 1.5 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) AP2 PF00847.20 ORF47818 - 0.098 12.9 0.5 0.098 12.9 0.5 2.0 2 0 0 2 2 2 0 AP2 domain Amidase PF01425.21 ORF47816 - 9.7e-06 24.8 0.0 1.1e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 Amidase MAS20 PF02064.15 ORF4774 - 2.3 8.3 9.7 3.3 7.8 9.7 1.3 1 0 0 1 1 1 0 MAS20 protein import receptor DUF4441 PF14536.6 ORF47122 - 0.027 14.7 9.0 0.083 13.1 9.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) PutA_N PF18083.1 ORF47122 - 0.1 12.6 0.4 0.52 10.3 0.1 2.2 1 1 1 2 2 2 0 Proline utilization A N-terminal domain NLRC4_HD PF17889.1 ORF47122 - 0.14 12.5 0.1 0.14 12.5 0.1 2.3 2 1 1 3 3 3 0 NLRC4 helical domain Maf PF02545.14 ORF46511 - 1.5e-28 99.7 0.2 1.7e-28 99.6 0.2 1.0 1 0 0 1 1 1 1 Maf-like protein DUF5421 PF17458.2 ORF46511 - 0.0045 16.4 0.0 0.0058 16.1 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5421) DUF1106 PF06523.11 ORF46511 - 0.0061 16.6 0.0 0.014 15.4 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1106) Pep_M12B_propep PF01562.19 ORF46511 - 0.0091 16.2 0.1 0.016 15.5 0.1 1.3 1 1 0 1 1 1 1 Reprolysin family propeptide DUF1848 PF08902.11 ORF46511 - 0.081 12.6 0.2 0.096 12.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1848) AP2 PF00847.20 ORF42660 - 0.098 12.9 0.5 0.098 12.9 0.5 2.0 2 0 0 2 2 2 0 AP2 domain Cpn60_TCP1 PF00118.24 ORF40724 - 0.17 10.5 0.0 0.2 10.2 0.0 1.1 1 0 0 1 1 1 0 TCP-1/cpn60 chaperonin family XRN_N PF03159.18 ORF40140 - 2.4e-54 184.3 0.1 2.7e-54 184.2 0.1 1.0 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus SRP68 PF16969.5 ORF40140 - 0.019 14.0 0.3 0.37 9.8 0.2 2.0 1 1 1 2 2 2 0 RNA-binding signal recognition particle 68 Caudo_TAP PF02413.17 ORF40140 - 0.045 13.9 0.1 0.064 13.4 0.1 1.2 1 0 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK Tmemb_9 PF05434.11 ORF39041 - 0.32 10.9 2.2 0.63 9.9 2.2 1.4 1 0 0 1 1 1 0 TMEM9 Thioredoxin PF00085.20 ORF39039 - 6.2e-07 29.4 0.1 1.9e-06 27.8 0.0 1.8 2 1 0 2 2 2 1 Thioredoxin DLP_helical PF18709.1 ORF39039 - 0.029 13.6 2.4 0.038 13.2 2.4 1.2 1 0 0 1 1 1 0 Dynamin-like helical domain EGF_alliinase PF04863.13 ORF39039 - 0.065 13.7 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Alliinase EGF-like domain Cep57_CLD_2 PF14197.6 ORF39039 - 0.082 13.0 2.2 0.18 11.9 2.2 1.6 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 Uso1_p115_C PF04871.13 ORF39039 - 0.18 12.2 10.7 0.27 11.6 10.7 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region TMF_DNA_bd PF12329.8 ORF39039 - 4.6 7.3 18.6 15 5.7 12.4 3.2 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding F_bP_aldolase PF01116.20 ORF38573 - 2.5e-36 125.6 0.0 2.9e-36 125.4 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Ntox22 PF15527.6 ORF38573 - 0.052 13.6 0.1 0.08 13.0 0.1 1.2 1 0 0 1 1 1 0 Bacterial toxin 22 Ribosomal_S19 PF00203.21 ORF37987 - 7.8e-26 89.8 0.5 1.2e-25 89.2 0.5 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 DUF5593 PF18007.1 ORF36097 - 2.1 9.1 6.1 0.76 10.5 2.7 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5593) MaoC_dehydrat_N PF13452.6 ORF35788 - 0.087 13.0 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 N-terminal half of MaoC dehydratase AATF-Che1 PF13339.6 ORF32316 - 0.073 13.7 1.8 0.14 12.8 1.8 1.5 1 1 0 1 1 1 0 Apoptosis antagonizing transcription factor CVNH PF08881.10 ORF31876 - 0.00011 22.9 1.2 0.034 14.8 0.1 1.9 1 1 1 2 2 2 2 CVNH domain DUF4165 PF13752.6 ORF31876 - 0.096 12.7 0.2 0.32 11.0 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4165) KilA-N PF04383.13 ORF31876 - 1.4 8.8 8.3 6.1 6.7 2.3 2.2 1 1 1 2 2 2 0 KilA-N domain RGS12_us1 PF16613.5 ORF3176 - 0.064 13.6 3.6 0.11 12.8 1.4 2.2 2 1 0 2 2 2 0 Unstructured region of RGS12 Peptidase_S10 PF00450.22 ORF3158 - 3.5e-15 56.4 0.0 4e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_C1 PF00112.23 ORF3146 - 9.3e-14 52.0 0.1 1.1e-13 51.8 0.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF3146 - 0.00031 19.6 0.1 0.00077 18.3 0.0 1.6 2 0 0 2 2 2 1 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF3146 - 0.00076 20.0 0.0 0.0012 19.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase_C39 like family Ribosomal_L27A PF00828.19 ORF29109 - 0.00087 20.0 0.1 0.0018 19.0 0.1 1.5 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Abhydrolase_1 PF00561.20 ORF27173 - 1.2e-17 64.4 0.0 1.4e-17 64.3 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF27173 - 2.1e-13 50.1 0.0 2.3e-13 50.0 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF27173 - 1.6e-11 45.3 0.0 1.8e-11 45.1 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 ORF27173 - 3.8e-05 23.4 0.0 7.2e-05 22.5 0.0 1.5 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase Chlorophyllase2 PF12740.7 ORF27173 - 0.014 14.3 0.1 0.031 13.2 0.1 1.4 1 1 0 1 1 1 0 Chlorophyllase enzyme Ser_hydrolase PF06821.13 ORF27173 - 0.054 13.4 0.0 0.071 13.0 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase Ndr PF03096.14 ORF27173 - 0.17 10.5 0.0 0.22 10.2 0.0 1.2 1 0 0 1 1 1 0 Ndr family AP2 PF00847.20 ORF24681 - 0.098 12.9 0.5 0.098 12.9 0.5 2.0 2 0 0 2 2 2 0 AP2 domain YihI PF04220.12 ORF22555 - 1.7e-54 183.8 13.4 2e-54 183.6 13.4 1.0 1 0 0 1 1 1 1 Der GTPase activator (YihI) VDE PF07137.11 ORF21096 - 0.0005 19.7 21.8 0.011 15.3 6.1 2.7 3 0 0 3 3 3 2 VDE lipocalin domain UPF0242 PF06785.11 ORF19569 - 0.049 13.7 6.9 0.063 13.4 6.9 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Fib_alpha PF08702.10 ORF19569 - 0.052 13.7 9.8 0.069 13.3 9.8 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family AHSP PF09236.10 ORF19569 - 0.11 13.0 0.1 0.11 13.0 0.1 2.3 2 1 0 2 2 2 0 Alpha-haemoglobin stabilising protein LMBR1 PF04791.16 ORF19569 - 0.12 11.3 0.8 0.14 11.0 0.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Spore_III_AB PF09548.10 ORF19569 - 0.12 12.5 5.4 0.16 12.1 5.4 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) Muted PF14942.6 ORF19569 - 0.19 12.0 10.6 0.27 11.6 10.6 1.3 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Syntaxin-6_N PF09177.11 ORF19569 - 0.68 10.5 8.1 0.37 11.4 4.0 2.0 1 1 1 2 2 2 0 Syntaxin 6, N-terminal ERM PF00769.19 ORF19569 - 0.88 9.3 18.3 1.2 8.9 18.3 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family DUF4062 PF13271.6 ORF19569 - 1.1 9.7 3.6 4.5 7.7 3.6 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4062) OEP PF02321.18 ORF19569 - 1.7 8.5 14.5 1.2 8.9 11.1 1.9 1 1 1 2 2 2 0 Outer membrane efflux protein DUF4407 PF14362.6 ORF19569 - 1.8 7.8 7.4 2.3 7.5 7.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PRKG1_interact PF15898.5 ORF19569 - 2.3 9.2 15.9 0.67 10.9 11.5 1.9 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain CENP-H PF05837.12 ORF19569 - 7 7.1 15.6 14 6.1 15.5 1.6 1 1 0 1 1 1 0 Centromere protein H (CENP-H) adh_short_C2 PF13561.6 ORF19070 - 1.4e-10 41.2 0.0 5.5e-05 22.8 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF19070 - 4.3e-09 36.1 0.0 0.0011 18.5 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase Ntox50 PF15542.6 ORF1662 - 1.6 9.6 6.4 0.49 11.2 2.2 2.3 1 1 2 3 3 3 0 Bacterial toxin 50 F-protein PF00469.20 ORF1662 - 3.3 7.2 7.4 4.3 6.9 7.4 1.2 1 0 0 1 1 1 0 Negative factor, (F-Protein) or Nef Thioredoxin PF00085.20 ORF15817 - 6.2e-07 29.4 0.1 1.9e-06 27.8 0.0 1.8 2 1 0 2 2 2 1 Thioredoxin DLP_helical PF18709.1 ORF15817 - 0.029 13.6 2.4 0.038 13.2 2.4 1.2 1 0 0 1 1 1 0 Dynamin-like helical domain EGF_alliinase PF04863.13 ORF15817 - 0.065 13.7 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Alliinase EGF-like domain Cep57_CLD_2 PF14197.6 ORF15817 - 0.082 13.0 2.2 0.18 11.9 2.2 1.6 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 Uso1_p115_C PF04871.13 ORF15817 - 0.18 12.2 10.7 0.27 11.6 10.7 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region TMF_DNA_bd PF12329.8 ORF15817 - 4.6 7.3 18.6 15 5.7 12.4 3.2 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Tmemb_9 PF05434.11 ORF15052 - 0.32 10.9 2.2 0.63 9.9 2.2 1.4 1 0 0 1 1 1 0 TMEM9 PhrC_PhrF PF11131.8 ORF13907 - 0.069 12.8 0.0 0.2 11.3 0.0 1.7 1 0 0 1 1 1 0 Rap-phr extracellular signalling SRP-alpha_N PF04086.13 ORF13771 - 0.73 9.7 18.9 0.78 9.6 18.9 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Lin-8 PF03353.15 ORF13771 - 1.7 8.1 8.1 1.8 8.0 8.1 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Ribosomal_60s PF00428.19 ORF13771 - 7.6 7.2 17.5 1.1 9.9 5.5 3.0 3 0 0 3 3 3 0 60s Acidic ribosomal protein Vpu PF00558.19 ORF13150 - 0.0021 17.8 1.4 0.25 11.1 0.2 2.4 2 0 0 2 2 2 2 Vpu protein YgaB PF14182.6 ORF13150 - 0.038 14.4 1.0 0.038 14.4 1.0 2.5 3 1 0 3 3 3 0 YgaB-like protein Cep57_MT_bd PF06657.13 ORF13150 - 0.056 13.9 3.5 0.14 12.6 0.1 2.7 3 0 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 CALCOCO1 PF07888.11 ORF13150 - 0.19 10.5 4.6 0.23 10.3 4.6 1.4 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like DivIC PF04977.15 ORF13150 - 3.4 7.5 8.4 0.31 10.8 2.3 2.2 2 1 1 3 3 3 0 Septum formation initiator Thioredoxin PF00085.20 ORF13002 - 6.2e-07 29.4 0.1 1.9e-06 27.8 0.0 1.8 2 1 0 2 2 2 1 Thioredoxin DLP_helical PF18709.1 ORF13002 - 0.029 13.6 2.4 0.038 13.2 2.4 1.2 1 0 0 1 1 1 0 Dynamin-like helical domain EGF_alliinase PF04863.13 ORF13002 - 0.065 13.7 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Alliinase EGF-like domain Cep57_CLD_2 PF14197.6 ORF13002 - 0.082 13.0 2.2 0.18 11.9 2.2 1.6 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 Uso1_p115_C PF04871.13 ORF13002 - 0.18 12.2 10.7 0.27 11.6 10.7 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region TMF_DNA_bd PF12329.8 ORF13002 - 4.6 7.3 18.6 15 5.7 12.4 3.2 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding P_C10 PF14974.6 ORF12580 - 0.00031 20.8 0.0 0.00058 19.9 0.0 1.5 1 0 0 1 1 1 1 Protein C10 TerB_C PF15615.6 ORF12580 - 0.0016 18.7 0.3 0.0069 16.7 0.1 1.8 2 0 0 2 2 2 1 TerB-C domain HP0268 PF18618.1 ORF12268 - 1.1 9.8 6.9 0.52 10.8 0.5 2.5 1 1 1 2 2 2 0 HP0268 DUF443 PF04276.12 ORF1145 - 0.11 12.3 0.5 0.15 11.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF443) Ribosomal_L18_c PF14204.6 ORF112132 - 1.7e-24 86.6 7.2 3.3e-24 85.6 7.2 1.5 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Sorting_nexin PF03700.13 ORF112132 - 0.043 14.4 1.9 0.058 14.0 1.4 1.5 1 1 0 1 1 1 0 Sorting nexin, N-terminal domain Colicin_immun PF09204.10 ORF112132 - 0.062 13.8 0.2 0.14 12.7 0.1 1.7 1 1 0 1 1 1 0 Bacterial self-protective colicin-like immunity AP2 PF00847.20 ORF112122 - 0.098 12.9 0.5 0.098 12.9 0.5 2.0 2 0 0 2 2 2 0 AP2 domain Pkinase PF00069.25 ORF111733 - 0.0001 21.8 0.1 0.00016 21.1 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain VWA_3 PF13768.6 ORF109911 - 1.5e-08 34.7 0.0 2.5e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF109911 - 0.00011 22.6 0.0 0.00025 21.4 0.0 1.6 1 1 1 2 2 2 1 von Willebrand factor type A domain Ank_4 PF13637.6 ORF109516 - 0.00018 22.0 0.0 0.044 14.4 0.0 3.1 3 1 0 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF109516 - 0.0012 19.1 0.1 2.5 8.5 0.0 3.0 2 1 0 3 3 3 2 Ankyrin repeats (many copies) Cytochrom_C_2 PF01322.20 ORF109319 - 0.0047 17.8 0.2 2.3 9.1 0.0 2.1 2 0 0 2 2 2 2 Cytochrome C' Scm3 PF10384.9 ORF109319 - 0.096 12.4 4.8 3 7.6 0.3 3.8 4 1 1 5 5 5 0 Centromere protein Scm3 DUF4446 PF14584.6 ORF109319 - 0.12 12.4 4.7 0.13 12.2 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Golgin_A5 PF09787.9 ORF109276 - 0.057 12.9 10.7 0.072 12.5 10.7 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 Tup_N PF08581.10 ORF109276 - 0.075 13.3 0.5 0.075 13.3 0.5 2.3 1 1 1 2 2 2 0 Tup N-terminal DUF2408 PF10303.9 ORF109276 - 0.18 12.4 5.1 0.7 10.5 5.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) Nup54 PF13874.6 ORF109276 - 0.33 11.0 12.0 1 9.4 12.0 1.7 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 FAM184 PF15665.5 ORF109276 - 0.46 10.2 11.3 0.89 9.3 11.3 1.4 1 1 0 1 1 1 0 Family with sequence similarity 184, A and B DUF883 PF05957.13 ORF109276 - 0.67 10.6 6.1 0.83 10.3 5.3 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) TMPIT PF07851.13 ORF109276 - 0.97 8.6 5.4 1.1 8.4 5.4 1.2 1 0 0 1 1 1 0 TMPIT-like protein OmpH PF03938.14 ORF109276 - 1.1 9.6 8.6 1.4 9.3 8.6 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Borrelia_P83 PF05262.11 ORF109276 - 1.4 7.3 5.9 1.5 7.2 5.9 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein Kinesin PF00225.23 ORF109153 - 3.1e-54 184.1 1.7 3.4e-54 184.0 1.7 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF109153 - 1.2e-06 28.5 0.1 1.9e-06 27.9 0.1 1.3 1 0 0 1 1 1 1 Microtubule binding NADHdh PF00146.21 ORF108856 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF108856 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) YlaC PF10777.9 ORF108398 - 0.044 13.6 1.7 0.073 12.9 1.7 1.4 1 0 0 1 1 1 0 Inner membrane protein YlaC TIM PF00121.18 ORF107142 - 1.4e-67 227.7 0.0 1.5e-67 227.5 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase Thioredoxin PF00085.20 ORF103965 - 6.2e-07 29.4 0.1 1.9e-06 27.8 0.0 1.8 2 1 0 2 2 2 1 Thioredoxin DLP_helical PF18709.1 ORF103965 - 0.029 13.6 2.4 0.038 13.2 2.4 1.2 1 0 0 1 1 1 0 Dynamin-like helical domain EGF_alliinase PF04863.13 ORF103965 - 0.065 13.7 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Alliinase EGF-like domain Cep57_CLD_2 PF14197.6 ORF103965 - 0.082 13.0 2.2 0.18 11.9 2.2 1.6 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 Uso1_p115_C PF04871.13 ORF103965 - 0.18 12.2 10.7 0.27 11.6 10.7 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region TMF_DNA_bd PF12329.8 ORF103965 - 4.6 7.3 18.6 15 5.7 12.4 3.2 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding TPALS PF18178.1 ORF102194 - 0.0039 16.7 0.0 0.0046 16.4 0.0 1.2 1 0 0 1 1 1 1 TIR- and PNP-associating SLOG family STALD PF18185.1 ORF102194 - 0.0046 16.3 0.0 0.0068 15.8 0.0 1.2 1 0 0 1 1 1 1 Sir2- and TIR-associating SLOG family LDcluster4 PF18306.1 ORF102194 - 0.14 11.8 0.0 0.3 10.7 0.0 1.6 2 0 0 2 2 2 0 SLOG cluster4 family DUF5460 PF17544.2 ORF102064 - 0.046 12.7 0.4 0.078 12.0 0.3 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5460) DUF2391 PF09622.10 ORF102064 - 0.58 9.5 2.5 0.79 9.0 2.5 1.2 1 0 0 1 1 1 0 Putative integral membrane protein (DUF2391) Pkinase PF00069.25 ORF101980 - 2.7e-34 118.7 0.1 3.1e-34 118.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101980 - 1.3e-14 54.2 0.0 1.6e-14 53.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF101980 - 0.0023 17.3 0.0 0.0032 16.8 0.0 1.2 1 0 0 1 1 1 1 Kinase-like DUF1722 PF08349.11 ORF101218 - 5.2e-35 120.2 0.1 6.5e-35 119.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) VHL_C PF17211.3 NODE_41038_length_502_cov_1.758030_g33511_i0reverse_frame_1 - 0.021 14.8 0.0 0.048 13.7 0.0 1.5 1 0 0 1 1 1 0 VHL box domain LRR_4 PF12799.7 NODE_41035_length_502_cov_2.164882_g33508_i0reverse_frame_1 - 0.22 12.0 6.9 0.26 11.8 2.7 2.8 2 1 0 2 2 2 0 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 NODE_41035_length_502_cov_2.164882_g33508_i0reverse_frame_1 - 8.2 6.8 7.5 4.6 7.6 0.4 3.5 4 0 0 4 4 4 0 Leucine Rich repeat Voltage_CLC PF00654.20 NODE_41027_length_502_cov_2.802998_g33500_i0reverse_frame_1 - 9e-30 104.1 14.3 9.7e-30 104.0 14.3 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel ABC_tran PF00005.27 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 1.3e-26 93.7 0.0 1.6e-26 93.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter Rad17 PF03215.15 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.00046 20.2 0.7 0.0038 17.2 0.0 2.1 1 1 1 2 2 2 1 Rad17 P-loop domain T2SSE PF00437.20 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.00051 19.2 0.0 0.00078 18.6 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.00062 20.0 0.0 0.00091 19.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.0008 19.1 0.0 0.0015 18.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.00095 19.6 0.0 0.0011 19.4 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.002 18.7 0.0 0.0031 18.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.0037 17.2 0.0 0.0049 16.8 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase DAP3 PF10236.9 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.0046 16.2 0.1 0.44 9.7 0.0 2.1 1 1 1 2 2 2 1 Mitochondrial ribosomal death-associated protein 3 AAA_33 PF13671.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.0049 17.0 0.0 0.0061 16.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.0049 16.1 0.0 0.0059 15.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_30 PF13604.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.0055 16.5 0.0 0.0075 16.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.0088 16.6 0.0 0.016 15.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.011 15.6 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system G-alpha PF00503.20 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.014 14.6 0.0 0.016 14.4 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit Mg_chelatase PF01078.21 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.021 14.2 0.0 0.027 13.8 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.021 14.3 0.0 0.032 13.8 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Zeta_toxin PF06414.12 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.023 14.0 0.0 0.04 13.2 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin cobW PF02492.19 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.029 14.0 0.0 0.04 13.5 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.036 14.3 0.0 0.051 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.073 12.8 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.089 13.2 0.0 0.15 12.5 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_19 PF13245.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.11 12.8 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.11 12.1 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_10 PF12846.7 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.15 11.0 0.0 0.17 10.7 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain ATPase_2 PF01637.18 NODE_41020_length_502_cov_3.394004_g33493_i0reverse_frame_1 - 0.17 11.8 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Sulfotransfer_3 PF13469.6 NODE_41009_length_502_cov_81.548180_g33482_i0reverse_frame_1 - 0.1 13.0 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Sulfotransferase family TOBE PF03459.17 NODE_41009_length_502_cov_81.548180_g33482_i0forward_frame_1 - 0.099 12.9 0.0 0.27 11.5 0.0 1.7 1 0 0 1 1 1 0 TOBE domain LEA_3 PF03242.13 NODE_41008_length_502_cov_83.342612_g33481_i0reverse_frame_1 - 5.1 7.9 6.7 1.8 9.3 2.8 2.1 2 1 0 2 2 2 0 Late embryogenesis abundant protein bZIP_1 PF00170.21 NODE_41006_length_502_cov_85.950749_g33479_i0reverse_frame_1 - 0.7 10.0 0.2 0.7 10.0 0.2 2.2 2 0 0 2 2 2 0 bZIP transcription factor DUF5345 PF17280.2 NODE_40998_length_502_cov_117.982869_g33472_i0reverse_frame_1 - 5.7 7.0 6.1 13 5.8 0.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5345) DUF948 PF06103.11 NODE_40979_length_503_cov_1.950855_g33457_i0forward_frame_1 - 0.044 14.1 0.0 0.085 13.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) InaF-motif PF15018.6 NODE_40974_length_503_cov_2.480769_g33452_i0reverse_frame_1 - 0.015 15.1 0.2 0.027 14.3 0.2 1.4 1 0 0 1 1 1 0 TRP-interacting helix Fimbrial PF00419.20 NODE_40969_length_503_cov_2.632479_g33447_i0reverse_frame_1 - 2.9e-09 37.4 0.7 4e-09 36.9 0.7 1.1 1 0 0 1 1 1 1 Fimbrial protein FAM72 PF14976.6 NODE_40966_length_503_cov_3.032051_g33445_i0reverse_frame_1 - 0.022 14.9 0.4 0.027 14.6 0.4 1.1 1 0 0 1 1 1 0 FAM72 protein PHY PF00360.20 NODE_40960_length_503_cov_3.613248_g33439_i0reverse_frame_1 - 0.086 12.1 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 Phytochrome region Abhydrolase_1 PF00561.20 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 2.5e-17 63.4 0.2 3e-17 63.1 0.2 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 1.1e-11 45.8 1.5 1.3e-11 45.5 1.5 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 2.2e-10 40.2 0.3 2.9e-10 39.8 0.3 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 0.00033 20.9 0.3 0.00042 20.5 0.3 1.1 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_2 PF02230.16 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 0.012 15.4 0.0 0.26 11.1 0.0 2.0 1 1 0 2 2 2 0 Phospholipase/Carboxylesterase Ndr PF03096.14 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 0.038 12.7 0.0 0.046 12.4 0.0 1.1 1 0 0 1 1 1 0 Ndr family Esterase PF00756.20 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 0.24 11.0 1.0 0.98 9.0 0.3 2.0 1 1 1 2 2 2 0 Putative esterase Svf1_C PF17187.4 NODE_40955_length_503_cov_39.081197_g33434_i0forward_frame_1 - 0.058 13.2 0.5 0.082 12.7 0.5 1.3 1 0 0 1 1 1 0 Svf1-like C-terminal lipocalin-like domain Ribosomal_L36 PF00444.18 NODE_40913_length_503_cov_2869.354701_g5706_i2forward_frame_1 - 0.89 9.8 3.7 0.37 11.0 0.7 1.8 2 0 0 2 2 2 0 Ribosomal protein L36 PsaD PF02531.16 NODE_40912_length_503_cov_4621.553419_g33395_i0reverse_frame_1 - 1e-41 141.7 0.4 1.4e-41 141.2 0.4 1.2 1 0 0 1 1 1 1 PsaD DnaJ PF00226.31 NODE_40908_length_504_cov_2.204691_g33391_i0reverse_frame_1 - 0.067 13.3 0.1 0.16 12.1 0.1 1.7 1 0 0 1 1 1 0 DnaJ domain Trypan_glycop PF00913.19 NODE_40908_length_504_cov_2.204691_g33391_i0reverse_frame_1 - 0.12 11.6 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 Trypanosome variant surface glycoprotein (A-type) HSP70 PF00012.20 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_1 - 1.3e-07 30.2 2.2 1.8e-07 29.7 2.2 1.2 1 0 0 1 1 1 1 Hsp70 protein FKBP_N PF01346.18 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_1 - 0.0045 17.9 7.5 0.0074 17.2 7.5 1.3 1 0 0 1 1 1 1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Phage_Mu_F PF04233.14 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_1 - 0.031 15.0 1.6 0.048 14.4 1.6 1.3 1 0 0 1 1 1 0 Phage Mu protein F like protein Coat_F PF07875.12 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_1 - 0.49 10.7 3.1 0.77 10.0 3.1 1.3 1 0 0 1 1 1 0 Coat F domain NAD-GH PF10712.9 NODE_40905_length_504_cov_2.724947_g33388_i0forward_frame_1 - 2.7e-05 22.8 0.2 3.3e-05 22.6 0.2 1.1 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Pelovaterin PF17859.1 NODE_40900_length_504_cov_3.791045_g33383_i0reverse_frame_1 - 0.054 13.8 2.8 0.054 13.8 2.8 2.2 2 0 0 2 2 2 0 Pelovaterin Stress-antifung PF01657.17 NODE_40895_length_504_cov_56.328358_g33378_i0reverse_frame_1 - 0.1 13.2 3.7 0.15 12.7 3.7 1.4 1 0 0 1 1 1 0 Salt stress response/antifungal Zf_RING PF16744.5 NODE_40882_length_504_cov_139.230277_g33365_i0reverse_frame_1 - 0.087 12.9 0.3 0.2 11.8 0.2 1.6 2 0 0 2 2 2 0 KIAA1045 RING finger SRP72 PF08492.12 NODE_40882_length_504_cov_139.230277_g33365_i0reverse_frame_1 - 0.56 10.7 7.9 0.2 12.1 3.4 2.2 2 0 0 2 2 2 0 SRP72 RNA-binding domain LLC1 PF14945.6 NODE_40860_length_504_cov_9253.168443_g33347_i0reverse_frame_1 - 3.7e-05 24.3 3.4 6.2e-05 23.6 3.4 1.5 1 1 0 1 1 1 1 Normal lung function maintenance, Low in Lung Cancer 1 protein Bestrophin PF01062.21 NODE_40855_length_505_cov_1.946809_g33343_i0forward_frame_3 - 0.17 11.3 3.4 0.31 10.4 3.4 1.5 1 1 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel DUF2304 PF10066.9 NODE_40855_length_505_cov_1.946809_g33343_i0forward_frame_3 - 0.98 9.7 6.0 0.26 11.5 2.1 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Ac76 PF05814.11 NODE_40855_length_505_cov_1.946809_g33343_i0forward_frame_3 - 4.5 7.3 7.8 0.79 9.8 2.7 2.2 1 1 1 2 2 2 0 Orf76 (Ac76) GAS2 PF02187.17 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 0.00013 22.0 0.1 0.00025 21.1 0.1 1.5 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain Med4 PF10018.9 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 0.038 13.7 3.3 0.051 13.2 3.3 1.3 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF724 PF05266.14 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 0.25 11.1 3.4 0.35 10.7 3.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 1.9 8.5 8.9 5.7 7.0 8.9 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF1515 PF07439.11 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 2 8.5 6.2 1.9 8.5 1.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) zf-C4H2 PF10146.9 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 7.8 6.8 11.8 12 6.2 11.8 1.3 1 1 0 1 1 1 0 Zinc finger-containing protein Cep57_CLD_2 PF14197.6 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 9.1 6.5 12.2 0.68 10.1 1.3 2.8 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 NAD_binding_1 PF00175.21 NODE_40849_length_505_cov_2.791489_g33337_i0forward_frame_3 - 2.7e-09 37.7 0.0 4.6e-08 33.7 0.0 2.1 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 NODE_40849_length_505_cov_2.791489_g33337_i0forward_frame_3 - 1.1e-05 25.6 0.2 0.011 15.8 0.1 2.3 1 1 1 2 2 2 2 Ferric reductase NAD binding domain LysR_substrate PF03466.20 NODE_40848_length_505_cov_2.806383_g33336_i0forward_frame_2 - 8.7e-18 64.4 0.1 1e-17 64.2 0.1 1.0 1 0 0 1 1 1 1 LysR substrate binding domain PLDc_2 PF13091.6 NODE_40847_length_505_cov_2.863830_g33335_i0reverse_frame_3 - 5.7e-14 52.1 0.0 7.3e-14 51.8 0.0 1.2 1 0 0 1 1 1 1 PLD-like domain YycC PF14174.6 NODE_40846_length_505_cov_3.308511_g33334_i0forward_frame_3 - 0.032 14.0 0.0 0.058 13.2 0.0 1.4 1 0 0 1 1 1 0 YycC-like protein Cortexin PF11057.8 NODE_40845_length_505_cov_3.685106_g33333_i0forward_frame_2 - 0.043 13.7 0.5 0.09 12.6 0.5 1.5 1 0 0 1 1 1 0 Cortexin of kidney SARS_3b PF12383.8 NODE_40841_length_505_cov_9.829787_g33329_i0reverse_frame_2 - 0.055 13.6 0.1 0.084 13.0 0.1 1.2 1 0 0 1 1 1 0 Severe acute respiratory syndrome coronavirus 3b protein DUF2723 PF11028.8 NODE_40829_length_505_cov_100.472340_g33317_i0reverse_frame_3 - 0.012 15.6 0.5 0.019 14.9 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2723) DUF1211 PF06736.11 NODE_40829_length_505_cov_100.472340_g33317_i0reverse_frame_3 - 0.067 13.6 0.8 0.12 12.8 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) SF3a60_bindingd PF12108.8 NODE_40829_length_505_cov_100.472340_g33317_i0reverse_frame_2 - 0.052 13.4 0.1 0.098 12.6 0.1 1.4 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain Antimicrobial12 PF08107.11 NODE_40803_length_506_cov_1.723992_g33294_i0forward_frame_3 - 0.073 12.8 0.8 0.17 11.6 0.8 1.6 1 0 0 1 1 1 0 Pleurocidin family CaMKII_AD PF08332.10 NODE_40800_length_506_cov_2.259023_g33291_i0forward_frame_3 - 0.058 13.5 0.2 0.082 13.0 0.2 1.2 1 0 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II association domain LAGLIDADG_1 PF00961.19 NODE_40798_length_506_cov_2.666667_g33289_i0reverse_frame_2 - 0.42 11.6 3.8 0.23 12.5 1.5 1.7 2 0 0 2 2 2 0 LAGLIDADG endonuclease Porin_1 PF00267.21 NODE_40792_length_506_cov_3.233546_g33283_i0forward_frame_2 - 2.4e-76 257.3 11.0 2.7e-76 257.2 11.0 1.0 1 0 0 1 1 1 1 Gram-negative porin Flavodoxin_1 PF00258.25 NODE_40789_length_506_cov_3.435244_g33280_i0reverse_frame_3 - 2.7e-05 24.4 0.0 3.8e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 NODE_40789_length_506_cov_3.435244_g33280_i0reverse_frame_3 - 0.0024 17.6 0.0 0.0037 17.0 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.7 NODE_40789_length_506_cov_3.435244_g33280_i0reverse_frame_3 - 0.033 14.4 0.0 0.097 12.9 0.0 1.8 2 0 0 2 2 2 0 Flavodoxin domain RHH_1 PF01402.21 NODE_40789_length_506_cov_3.435244_g33280_i0reverse_frame_2 - 8.5e-10 38.2 2.1 1.5e-09 37.4 2.1 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_4 PF13467.6 NODE_40789_length_506_cov_3.435244_g33280_i0reverse_frame_2 - 0.073 13.0 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 Ribbon-helix-helix domain Med26_C PF15693.5 NODE_40789_length_506_cov_3.435244_g33280_i0reverse_frame_2 - 0.082 13.1 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 26 C-terminal XPB_DRD PF18458.1 NODE_40788_length_506_cov_3.492569_g33279_i0reverse_frame_3 - 0.13 12.1 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain FLYWCH PF04500.16 NODE_40788_length_506_cov_3.492569_g33279_i0reverse_frame_2 - 2.1 8.5 5.1 0.72 10.0 0.9 2.0 2 0 0 2 2 2 0 FLYWCH zinc finger domain DHHC PF01529.20 NODE_40785_length_506_cov_4.579618_g33276_i0forward_frame_3 - 2.7 8.1 11.5 4 7.5 11.5 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Tropomodulin PF03250.14 NODE_40783_length_506_cov_24.108280_g33274_i0reverse_frame_2 - 0.033 14.2 0.6 0.099 12.7 0.0 1.8 2 0 0 2 2 2 0 Tropomodulin Aft1_HRA PF11786.8 NODE_40783_length_506_cov_24.108280_g33274_i0reverse_frame_2 - 0.044 14.1 1.2 0.29 11.5 1.2 2.1 1 1 0 1 1 1 0 Aft1 HRA domain DUF2486 PF10667.9 NODE_40781_length_506_cov_63.329087_g33272_i0reverse_frame_3 - 0.95 9.6 13.4 1.2 9.3 13.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2486) TPP_enzyme_N PF02776.18 NODE_40777_length_506_cov_72.371550_g33268_i0reverse_frame_2 - 0.11 12.2 2.7 0.14 11.8 0.9 1.9 1 1 1 2 2 2 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDC45 PF02724.14 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 0.02 13.2 3.4 0.017 13.4 3.4 1.1 1 0 0 1 1 1 0 CDC45-like protein TRAP_alpha PF03896.16 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 0.37 10.0 5.3 0.44 9.7 5.3 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Pox_Ag35 PF03286.14 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 1.4 8.6 12.0 2 8.2 12.0 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Presenilin PF01080.17 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 1.5 7.5 4.0 1.5 7.5 4.0 1.1 1 0 0 1 1 1 0 Presenilin NOA36 PF06524.12 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 1.7 7.9 10.7 0.93 8.8 8.2 1.7 2 0 0 2 2 2 0 NOA36 protein GEN1_C PF18380.1 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 4.1 8.3 10.6 7.8 7.5 10.6 1.5 1 0 0 1 1 1 0 Holliday junction resolvase Gen1 C-terminal domain TMEM247 PF15444.6 NODE_40759_length_506_cov_296.626327_g33250_i0forward_frame_3 - 0.79 9.7 2.2 1.1 9.2 2.2 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 ParBc PF02195.18 NODE_40752_length_507_cov_2.031780_g33244_i0forward_frame_3 - 4.8e-09 36.4 0.0 9.8e-09 35.4 0.0 1.5 1 0 0 1 1 1 1 ParB-like nuclease domain DSPc PF00782.20 NODE_40751_length_507_cov_2.055085_g33243_i0reverse_frame_3 - 2.6e-05 24.0 0.1 5e-05 23.1 0.1 1.4 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Maf PF02545.14 NODE_40743_length_507_cov_2.894068_g33235_i0forward_frame_2 - 2.6e-27 95.7 0.0 3e-27 95.5 0.0 1.1 1 0 0 1 1 1 1 Maf-like protein PapC_N PF13954.6 NODE_40742_length_507_cov_3.288136_g33234_i0forward_frame_3 - 7.7e-24 84.4 0.1 1.1e-23 83.9 0.1 1.2 1 0 0 1 1 1 1 PapC N-terminal domain Usher PF00577.20 NODE_40742_length_507_cov_3.288136_g33234_i0forward_frame_3 - 1.5e-06 27.4 0.1 2.5e-06 26.6 0.1 1.3 1 0 0 1 1 1 1 Outer membrane usher protein Biopterin_H PF00351.21 NODE_40741_length_507_cov_3.341102_g33233_i0reverse_frame_3 - 0.0064 15.6 0.4 0.0082 15.2 0.4 1.1 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase PH_RBD PF12068.8 NODE_40740_length_507_cov_3.633475_g33232_i0reverse_frame_3 - 0.021 14.3 0.4 0.029 13.9 0.4 1.2 1 0 0 1 1 1 0 Rab-binding domain (RBD) Guanylate_kin PF00625.21 NODE_40740_length_507_cov_3.633475_g33232_i0reverse_frame_2 - 7.8e-28 97.4 0.0 9.6e-28 97.1 0.0 1.1 1 0 0 1 1 1 1 Guanylate kinase RIIa PF02197.17 NODE_40740_length_507_cov_3.633475_g33232_i0reverse_frame_2 - 3.8e-05 23.3 0.0 6.7e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit DUF2811 PF10929.8 NODE_40740_length_507_cov_3.633475_g33232_i0reverse_frame_2 - 0.19 12.0 0.3 1.5 9.2 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF2811) AAA_33 PF13671.6 NODE_40740_length_507_cov_3.633475_g33232_i0reverse_frame_2 - 0.2 11.8 0.1 0.44 10.7 0.1 1.6 1 1 0 1 1 1 0 AAA domain T_cell_tran_alt PF15128.6 NODE_40737_length_507_cov_4.338983_g33229_i0forward_frame_2 - 0.2 11.5 1.0 0.33 10.8 1.0 1.4 1 0 0 1 1 1 0 T-cell leukemia translocation-altered ESR1_C PF12743.7 NODE_40726_length_507_cov_98.283898_g33218_i0reverse_frame_3 - 0.11 12.3 0.1 0.22 11.3 0.1 1.4 1 0 0 1 1 1 0 Oestrogen-type nuclear receptor final C-terminal DUF930 PF06059.12 NODE_40726_length_507_cov_98.283898_g33218_i0forward_frame_3 - 0.036 14.6 0.2 0.066 13.8 0.2 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF930) DGF-1_C PF11040.8 NODE_40724_length_507_cov_101.635593_g33216_i0forward_frame_2 - 0.025 14.5 0.1 0.04 13.9 0.1 1.4 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus Bowman-Birk_leg PF00228.20 NODE_40721_length_507_cov_117.506356_g28644_i1forward_frame_3 - 0.0096 16.3 2.4 0.027 14.9 2.4 1.9 1 0 0 1 1 1 1 Bowman-Birk serine protease inhibitor family AMPK1_CBM PF16561.5 NODE_40718_length_507_cov_152.542373_g33212_i0reverse_frame_2 - 0.16 12.2 0.3 0.31 11.3 0.0 1.6 2 0 0 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase Ras PF00071.22 NODE_40716_length_507_cov_183.737288_g33210_i0forward_frame_2 - 7.1e-11 42.0 0.0 8.7e-11 41.7 0.0 1.1 1 0 0 1 1 1 1 Ras family HalX PF08663.10 NODE_40714_length_507_cov_203.961864_g33208_i0reverse_frame_3 - 0.15 12.4 0.5 14 6.1 0.1 2.1 2 0 0 2 2 2 0 HalX domain Sp38 PF07354.12 NODE_40714_length_507_cov_203.961864_g33208_i0reverse_frame_2 - 0.36 10.2 1.8 1.5 8.2 0.1 1.9 1 1 1 2 2 2 0 Zona-pellucida-binding protein (Sp38) FNIP PF05725.12 NODE_40714_length_507_cov_203.961864_g33208_i0forward_frame_3 - 7.4e-30 102.9 8.8 6.2e-12 45.5 0.3 3.6 2 1 0 3 3 3 3 FNIP Repeat Glyco_hydro_65C PF03633.15 NODE_40714_length_507_cov_203.961864_g33208_i0forward_frame_3 - 4.2 7.4 5.4 2.3e+02 1.8 0.1 4.5 6 0 0 6 6 6 0 Glycosyl hydrolase family 65, C-terminal domain FNIP PF05725.12 NODE_40714_length_507_cov_203.961864_g33208_i0forward_frame_2 - 5.5e-18 64.9 4.1 3.8e-11 43.0 0.4 2.0 1 1 1 2 2 2 2 FNIP Repeat DUF4796 PF16044.5 NODE_40710_length_507_cov_259.862288_g33204_i0forward_frame_3 - 0.0064 16.1 0.3 0.01 15.5 0.0 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4796) PAP_fibrillin PF04755.12 ORF99445 - 0.00021 21.3 0.0 0.0031 17.5 0.0 2.0 1 1 0 1 1 1 1 PAP_fibrillin SVWC PF15430.6 ORF99294 - 0.18 12.1 0.0 0.18 12.1 0.0 2.5 2 1 1 3 3 3 0 Single domain von Willebrand factor type C Pro_isomerase PF00160.21 ORF97619 - 2.4e-42 144.9 0.0 2.7e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SGL PF08450.12 ORF96033 - 1e-06 28.6 0.0 0.0013 18.3 0.0 2.1 1 1 1 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region PQQ PF01011.21 ORF96033 - 8.2e-05 22.3 0.2 1.1 9.3 0.0 3.4 3 0 0 3 3 3 2 PQQ enzyme repeat PQQ_2 PF13360.6 ORF96033 - 0.00092 18.9 0.1 0.0034 17.0 0.1 1.6 1 1 1 2 2 2 1 PQQ-like domain Cytochrom_D1 PF02239.16 ORF96033 - 0.0031 16.1 0.2 0.052 12.1 0.0 2.1 1 1 0 2 2 2 1 Cytochrome D1 heme domain Lactonase PF10282.9 ORF96033 - 0.0091 15.3 0.3 0.21 10.8 0.1 2.3 1 1 0 2 2 2 1 Lactonase, 7-bladed beta-propeller MRJP PF03022.16 ORF96033 - 0.018 14.4 0.2 0.56 9.5 0.0 2.1 2 0 0 2 2 2 0 Major royal jelly protein ANAPC4_WD40 PF12894.7 ORF96033 - 0.024 14.9 0.1 24 5.3 0.0 3.4 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain MMPL PF03176.15 ORF96033 - 0.07 12.1 0.3 0.078 11.9 0.3 1.1 1 0 0 1 1 1 0 MMPL family TctB PF07331.11 ORF95674 - 2.9e-21 76.2 15.6 3.5e-21 75.9 15.6 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family HisKA_7TM PF16927.5 ORF95674 - 0.019 15.0 13.2 0.57 10.2 0.3 2.2 1 1 0 2 2 2 0 N-terminal 7TM region of histidine kinase DUF4083 PF13314.6 ORF95674 - 0.94 9.5 0.0 0.94 9.5 0.0 2.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4083) AAA_18 PF13238.6 ORF95351 - 6.3e-06 26.8 0.1 1.4e-05 25.6 0.1 1.6 1 1 1 2 2 2 1 AAA domain ABC_tran PF00005.27 ORF95351 - 0.00072 20.1 0.6 0.0018 18.8 0.6 1.7 1 1 0 1 1 1 1 ABC transporter Zeta_toxin PF06414.12 ORF95351 - 0.00093 18.5 0.0 0.0016 17.8 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_17 PF13207.6 ORF95351 - 0.0014 19.0 0.0 0.0038 17.6 0.0 1.7 1 1 1 2 2 2 1 AAA domain ADK PF00406.22 ORF95351 - 0.0016 18.5 0.0 0.0031 17.6 0.0 1.5 1 1 0 1 1 1 1 Adenylate kinase Cytidylate_kin PF02224.18 ORF95351 - 0.0017 18.1 0.1 0.0025 17.6 0.1 1.4 1 1 0 1 1 1 1 Cytidylate kinase SKI PF01202.22 ORF95351 - 0.0025 18.0 0.4 0.038 14.1 0.1 2.2 1 1 1 2 2 2 1 Shikimate kinase AAA_33 PF13671.6 ORF95351 - 0.0026 17.9 0.0 0.0035 17.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain TsaE PF02367.17 ORF95351 - 0.0043 17.0 0.0 0.0057 16.6 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF2075 PF09848.9 ORF95351 - 0.0055 16.0 0.0 0.0069 15.7 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) CPT PF07931.12 ORF95351 - 0.014 15.3 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein RsgA_GTPase PF03193.16 ORF95351 - 0.015 15.2 0.1 0.027 14.4 0.1 1.4 1 1 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 ORF95351 - 0.016 14.9 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 ORF95351 - 0.023 14.7 0.2 0.06 13.3 0.0 1.7 1 1 1 2 2 2 0 Rad17 P-loop domain AAA_28 PF13521.6 ORF95351 - 0.074 13.3 0.0 0.094 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain Ploopntkinase1 PF18748.1 ORF95351 - 0.077 12.5 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase1 AAA_16 PF13191.6 ORF95351 - 0.085 13.2 0.0 0.12 12.7 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 ORF95351 - 0.094 13.1 0.1 0.17 12.3 0.1 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 ORF95351 - 0.13 11.6 1.3 0.22 10.9 1.2 1.4 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain Linker_histone PF00538.19 ORF95351 - 0.21 12.0 1.7 1.9 8.9 0.1 2.8 3 0 0 3 3 3 0 linker histone H1 and H5 family DHO_dh PF01180.21 ORF93001 - 3.5e-07 29.7 0.0 5e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase DMRT-like PF15791.5 ORF93001 - 0.0093 16.4 1.4 0.012 16.0 0.9 1.4 1 1 0 1 1 1 1 Doublesex-and mab-3-related transcription factor C1 and C2 EF-hand_7 PF13499.6 ORF91477 - 0.048 14.1 0.2 0.13 12.7 0.1 1.7 2 0 0 2 2 2 0 EF-hand domain pair DUF4618 PF15397.6 ORF91477 - 0.11 11.9 1.7 2.5 7.4 0.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) MORN PF02493.20 ORF91312 - 4.6e-12 45.1 5.0 9.1e-05 22.1 0.3 3.4 3 0 0 3 3 3 3 MORN repeat SufE PF02657.15 ORF89748 - 0.067 13.0 0.1 0.096 12.5 0.1 1.4 1 0 0 1 1 1 0 Fe-S metabolism associated domain TMEM191C PF15194.6 ORF89748 - 0.1 12.8 0.2 0.2 11.8 0.2 1.5 1 0 0 1 1 1 0 TMEM191C family DUF2052 PF09747.9 ORF89748 - 1.3 9.1 10.3 2.1 8.4 10.3 1.4 1 1 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Presenilin PF01080.17 ORF89748 - 4.9 5.8 4.2 6 5.5 4.2 1.1 1 0 0 1 1 1 0 Presenilin zf-C2H2 PF00096.26 ORF89187 - 3.7e-16 58.6 15.2 1.4e-06 28.4 2.9 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF89187 - 3.7e-12 46.1 9.4 1.4e-05 25.3 2.0 2.5 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF89187 - 5.8e-10 39.2 12.1 0.0006 20.4 1.7 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_5 PF13909.6 ORF89187 - 2.6e-06 27.1 4.3 2.6e-06 27.1 4.3 3.2 4 0 0 4 4 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF89187 - 0.00045 20.5 6.4 0.00074 19.8 1.2 2.2 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF89187 - 0.0031 17.2 1.7 0.0049 16.6 0.1 2.0 2 0 0 2 2 2 1 zinc-finger C2H2-type AbiJ_NTD4 PF18863.1 ORF89187 - 0.018 15.5 0.3 0.023 15.2 0.3 1.2 1 0 0 1 1 1 0 AbiJ N-terminal domain 4 CxC3 PF18804.1 ORF89187 - 0.019 14.8 0.2 0.034 14.0 0.2 1.5 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases zf-met PF12874.7 ORF89187 - 0.052 13.9 13.7 1.3 9.6 1.4 3.5 3 1 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF89187 - 0.059 13.7 9.6 0.29 11.5 7.6 2.7 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) Mut7-C PF01927.16 ORF89187 - 0.11 12.6 3.6 0.16 12.1 2.8 1.6 1 1 1 2 2 2 0 Mut7-C RNAse domain zinc_ribbon_15 PF17032.5 ORF89187 - 0.16 12.7 7.9 0.082 13.7 5.2 1.8 1 1 1 2 2 2 0 zinc-ribbon family Zn-ribbon_8 PF09723.10 ORF89187 - 0.42 10.8 0.2 0.42 10.8 0.2 2.9 3 0 0 3 3 3 0 Zinc ribbon domain PyrI_C PF02748.15 ORF89187 - 0.82 9.6 8.9 1.7 8.6 0.5 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2H2_6 PF13912.6 ORF89187 - 1.2 9.2 18.4 1.1 9.3 3.6 3.4 3 1 0 3 3 3 0 C2H2-type zinc finger zf-AN1 PF01428.16 ORF89187 - 1.3 9.3 8.0 7.8 6.8 0.3 3.0 3 0 0 3 3 3 0 AN1-like Zinc finger zf-LYAR PF08790.11 ORF89187 - 1.5 8.8 6.6 1.6 8.7 0.4 3.0 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger zf-BED PF02892.15 ORF89187 - 3.6 7.7 11.8 0.93 9.6 1.8 2.7 2 1 0 2 2 2 0 BED zinc finger C1_2 PF03107.16 ORF89187 - 5.5 7.4 9.2 11 6.5 0.7 3.2 3 0 0 3 3 3 0 C1 domain Xlink PF00193.17 ORF88148 - 0.64 10.4 2.2 0.59 10.6 0.6 1.7 2 0 0 2 2 2 0 Extracellular link domain SMP PF04927.12 ORF87649 - 2 8.9 7.9 4.3 7.9 0.1 2.5 2 0 0 2 2 2 0 Seed maturation protein PRIMA1 PF16101.5 ORF87649 - 5 7.2 14.7 4.1 7.5 0.8 2.2 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 Phe_ZIP PF08916.11 ORF86942 - 1.1 10.0 11.0 6.8 7.5 1.3 3.2 2 1 1 3 3 3 0 Phenylalanine zipper DUF5465 PF17553.2 ORF85225 - 6.4 7.6 6.6 3.4 8.4 2.1 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5465) Cellulase PF00150.18 ORF8504 - 6.8e-05 22.4 0.4 9.1e-05 22.0 0.4 1.2 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Hepatitis_core PF00906.20 ORF83299 - 5.5 6.5 12.2 7.4 6.1 12.2 1.2 1 0 0 1 1 1 0 Hepatitis core antigen Ribonuc_L-PSP PF01042.21 ORF8235 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Nuc_deoxyri_tr2 PF15891.5 ORF79683 - 0.065 13.5 1.0 0.13 12.6 1.0 1.5 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase like Proton_antipo_M PF00361.20 ORF789 - 8.6e-13 48.1 2.6 8.6e-13 48.1 2.6 1.6 1 1 0 1 1 1 1 Proton-conducting membrane transporter CopD PF05425.13 ORF789 - 0.0039 17.6 6.9 0.34 11.3 3.9 2.1 2 0 0 2 2 2 2 Copper resistance protein D DUF4389 PF14333.6 ORF789 - 0.47 10.4 0.1 0.47 10.4 0.1 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4389) DUF4083 PF13314.6 ORF789 - 1.8 8.6 5.7 2.3 8.2 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) DUF2254 PF10011.9 ORF78663 - 0.0055 15.6 0.0 0.0068 15.3 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) TMEMspv1-c74-12 PF11044.8 ORF78663 - 0.029 14.3 0.1 0.029 14.3 0.1 1.5 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein PI_PP_I PF18363.1 ORF77567 - 0.15 12.2 0.3 0.25 11.5 0.3 1.4 1 0 0 1 1 1 0 Phosphoinositide phosphatase insertion domain Ribonuc_L-PSP PF01042.21 ORF77037 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Sec15 PF04091.12 ORF76968 - 8.6e-07 28.7 3.1 8.6e-07 28.7 3.1 1.9 1 1 1 2 2 2 1 Exocyst complex subunit Sec15-like DUF1188 PF06690.11 ORF76968 - 0.023 14.2 1.5 0.031 13.8 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Suv3_N PF18114.1 ORF76968 - 0.039 14.1 0.3 0.059 13.5 0.2 1.5 1 1 0 1 1 1 0 Suv3 helical N-terminal domain SBDS_C PF09377.10 ORF76968 - 0.077 13.0 0.4 0.077 13.0 0.4 1.9 1 1 1 2 2 2 0 SBDS protein C-terminal domain Gln-synt_N PF03951.19 ORF73457 - 4.1e-08 32.8 0.0 6.4e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Tup_N PF08581.10 ORF70034 - 0.0014 18.9 4.2 0.0014 18.9 4.2 2.9 1 1 2 3 3 3 1 Tup N-terminal CEP63 PF17045.5 ORF70034 - 0.0017 18.3 3.7 0.0017 18.3 3.7 2.1 2 0 0 2 2 2 1 Centrosomal protein of 63 kDa Abp2 PF09441.10 ORF70034 - 0.049 13.7 1.0 0.061 13.4 1.0 1.2 1 0 0 1 1 1 0 ARS binding protein 2 DUF489 PF04356.12 ORF70034 - 0.17 11.9 3.5 0.23 11.4 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF489) Mucin15 PF15672.5 ORF70034 - 0.34 10.3 6.2 0.14 11.6 1.4 1.9 1 1 1 2 2 2 0 Cell-membrane associated Mucin15 Sgf11_N PF18519.1 ORF70034 - 0.57 9.8 3.0 0.34 10.5 0.5 1.9 2 0 0 2 2 2 0 SAGA-associated factor 11 N-terminal domain DUF4446 PF14584.6 ORF70034 - 1 9.3 9.6 0.1 12.6 2.9 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF4446) UPF0242 PF06785.11 ORF70034 - 7.4 6.6 16.4 24 5.0 16.4 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Smr PF01713.21 ORF68035 - 5.5e-08 33.1 0.0 1.2e-07 32.0 0.0 1.7 1 1 0 1 1 1 1 Smr domain DUF2577 PF10844.8 ORF68035 - 0.09 13.0 0.8 0.14 12.4 0.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2577) Trimer_CC PF08954.11 ORF65855 - 0.11 12.0 0.1 0.11 12.0 0.1 1.8 2 0 0 2 2 2 0 Trimerisation motif MtrG PF04210.13 ORF65855 - 0.23 11.3 0.3 0.23 11.3 0.3 2.0 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G MORN PF02493.20 ORF64099 - 1.3e-33 112.9 45.1 3.2e-08 33.0 1.4 7.2 7 0 0 7 7 7 7 MORN repeat ID PF18543.1 ORF64099 - 0.048 13.7 1.2 10 6.2 0.2 3.5 4 0 0 4 4 4 0 Intracellular delivery domain MVL PF12151.8 ORF64099 - 0.17 11.7 4.1 2.2 8.2 0.3 2.8 2 0 0 2 2 2 0 Mannan-binding protein Cas_Csy1 PF09611.10 ORF63910 - 0.021 13.9 0.1 0.027 13.5 0.1 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) DUF1664 PF07889.12 ORF63910 - 0.038 14.0 4.4 0.05 13.6 0.5 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) TfuA PF07812.12 ORF63910 - 0.081 12.7 1.1 1 9.1 0.1 2.1 2 0 0 2 2 2 0 TfuA-like protein ATG16 PF08614.11 ORF63910 - 0.26 11.5 13.9 0.03 14.5 7.4 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) XkdW PF09636.10 ORF63910 - 0.41 10.7 3.2 9 6.4 0.8 2.3 2 0 0 2 2 2 0 XkdW protein DUF4140 PF13600.6 ORF63910 - 1.6 9.2 8.8 0.85 10.1 2.5 2.4 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) SlyX PF04102.12 ORF63910 - 2.4 8.8 14.5 0.73 10.5 5.9 3.6 2 1 2 4 4 4 0 SlyX CK2S PF15011.6 ORF63910 - 3.8 7.4 11.4 0.54 10.1 4.5 2.2 1 1 0 2 2 2 0 Casein Kinase 2 substrate ARGLU PF15346.6 ORF63910 - 9.9 6.0 14.1 0.35 10.7 3.1 2.3 2 1 0 2 2 2 0 Arginine and glutamate-rich 1 DUF489 PF04356.12 ORF61615 - 6.7e-57 192.6 0.1 7.6e-57 192.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF489) PI3K_P85_iSH2 PF16454.5 ORF61615 - 0.095 12.3 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain SVWC PF15430.6 ORF61370 - 0.18 12.1 0.0 0.18 12.1 0.0 2.5 2 1 1 3 3 3 0 Single domain von Willebrand factor type C ROK PF00480.20 ORF60496 - 1.6e-54 185.4 8.7 1.8e-54 185.3 8.7 1.0 1 0 0 1 1 1 1 ROK family DUF2173 PF09941.9 ORF60496 - 0.064 13.6 0.3 0.38 11.1 0.1 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2173) PAGK PF15284.6 ORF60197 - 0.036 14.0 0.1 0.067 13.1 0.1 1.4 1 0 0 1 1 1 0 Phage-encoded virulence factor CorA PF01544.18 ORF60197 - 0.7 9.2 5.4 1.1 8.6 5.4 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein CemA PF03040.14 ORF60197 - 1.6 8.6 5.5 1.2 9.1 3.8 1.6 1 1 1 2 2 2 0 CemA family CDP-OH_P_transf PF01066.21 ORF57804 - 0.18 12.6 3.0 9.6 7.1 0.5 2.5 2 1 0 2 2 2 0 CDP-alcohol phosphatidyltransferase DUF565 PF04483.12 ORF57804 - 0.34 11.5 6.5 1.8 9.1 0.8 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF565) GWT1 PF06423.12 ORF57804 - 7.2 6.7 10.9 11 6.1 1.6 2.1 1 1 1 2 2 2 0 GWT1 Hydrolase PF00702.26 ORF57310 - 2.5e-07 31.2 0.1 3.6e-07 30.7 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase KGK PF08872.10 ORF57310 - 0.0083 16.6 0.0 0.013 16.0 0.0 1.3 1 0 0 1 1 1 1 KGK domain Hydrolase_3 PF08282.12 ORF57310 - 0.01 15.6 0.5 0.014 15.2 0.5 1.3 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Y_phosphatase PF00102.27 ORF57310 - 0.033 13.7 0.0 0.038 13.6 0.0 1.2 1 1 0 1 1 1 0 Protein-tyrosine phosphatase Ribonuc_L-PSP PF01042.21 ORF56594 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP CHS5_N PF16892.5 ORF55994 - 0.12 12.4 0.1 0.23 11.4 0.1 1.4 1 0 0 1 1 1 0 Chitin biosynthesis protein CHS5 N-terminus CBFD_NFYB_HMF PF00808.23 ORF52995 - 2.2e-14 53.5 0.4 3.8e-14 52.7 0.4 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF52995 - 3.2e-10 40.5 0.3 7.9e-10 39.2 0.3 1.6 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-X PF09415.10 ORF52995 - 0.063 13.6 0.0 0.12 12.8 0.0 1.5 1 1 0 1 1 1 0 CENP-S associating Centromere protein X Pro_isomerase PF00160.21 ORF52594 - 2.4e-42 144.9 0.0 2.7e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Adenine_glyco PF03352.13 ORF52466 - 0.044 13.6 0.0 0.077 12.8 0.0 1.4 1 1 0 1 1 1 0 Methyladenine glycosylase DUF2254 PF10011.9 ORF52279 - 0.0055 15.6 0.0 0.0068 15.3 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) TMEMspv1-c74-12 PF11044.8 ORF52279 - 0.029 14.3 0.1 0.029 14.3 0.1 1.5 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Pkinase PF00069.25 ORF51817 - 4.7e-13 49.1 0.0 7.9e-13 48.4 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain EF-hand_7 PF13499.6 ORF51817 - 0.00049 20.5 0.3 0.062 13.8 0.1 1.9 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF51817 - 0.0052 16.6 0.0 0.014 15.2 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF51817 - 0.015 14.8 0.0 0.045 13.3 0.0 1.8 1 0 0 1 1 1 0 EF hand EF-hand_1 PF00036.32 ORF51817 - 0.04 13.5 0.1 0.1 12.2 0.1 1.7 1 0 0 1 1 1 0 EF hand EF-hand_9 PF14658.6 ORF51817 - 0.099 13.0 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain Proton_antipo_N PF00662.20 ORF50076 - 1.2e-10 41.2 0.2 1.2e-10 41.2 0.2 1.7 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF3302 PF11742.8 ORF50076 - 0.0088 16.2 0.0 0.021 15.0 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3302) Alg6_Alg8 PF03155.15 ORF50076 - 0.06 12.3 2.3 0.071 12.1 2.3 1.1 1 0 0 1 1 1 0 ALG6, ALG8 glycosyltransferase family DUF2614 PF11023.8 ORF50076 - 7.3 6.7 6.5 15 5.7 3.9 2.2 2 0 0 2 2 2 0 Zinc-ribbon containing domain NADHdh PF00146.21 ORF50074 - 4.9e-27 95.0 9.8 5.5e-27 94.9 9.8 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF2809 PF10990.8 ORF50074 - 0.042 14.5 8.9 2.6 8.8 0.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2809) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks127.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks127.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks127.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks127.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:49:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ANAPC4_WD40 PF12894.7 ORF48870 - 5e-05 23.5 0.1 0.37 11.1 0.1 2.6 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF48870 - 0.00024 21.8 0.5 1.1 10.3 0.1 3.4 3 0 0 3 3 3 1 WD domain, G-beta repeat eIF2A PF08662.11 ORF48870 - 0.0025 17.7 0.3 0.0096 15.8 0.3 1.8 1 1 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A Coatomer_WDAD PF04053.14 ORF48870 - 0.0037 16.4 0.1 0.0043 16.2 0.1 1.0 1 0 0 1 1 1 1 Coatomer WD associated region PALB2_WD40 PF16756.5 ORF48870 - 0.007 15.3 0.0 0.0089 15.0 0.0 1.1 1 0 0 1 1 1 1 Partner and localizer of BRCA2 WD40 domain Redoxin PF08534.10 ORF48596 - 7e-32 110.2 0.1 8.4e-32 109.9 0.1 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 ORF48596 - 7.7e-16 58.1 0.0 9.3e-16 57.9 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Tubulin PF00091.25 ORF46715 - 4e-28 99.0 0.0 4.7e-28 98.7 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 ORF46715 - 0.0003 21.1 0.0 0.0005 20.4 0.0 1.5 1 1 0 1 1 1 1 Misato Segment II tubulin-like domain Peptidase_C1 PF00112.23 ORF45139 - 4.9e-16 59.5 1.7 5.7e-16 59.3 1.7 1.1 1 0 0 1 1 1 1 Papain family cysteine protease TauE PF01925.19 ORF44972 - 0.00012 21.8 0.0 0.00014 21.6 0.0 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Aminotran_1_2 PF00155.21 ORF44531 - 1.2e-23 83.9 0.0 1.3e-23 83.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II UCH PF00443.29 ORF43818 - 5.3e-15 55.6 0.0 6.1e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF43818 - 5e-05 23.0 0.0 5.7e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Pro_isomerase PF00160.21 ORF43058 - 2.4e-42 144.9 0.0 2.7e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Yip1 PF04893.17 ORF40970 - 1.1e-11 44.7 9.6 1.1e-11 44.7 9.6 1.6 1 1 1 2 2 2 1 Yip1 domain FKBP_C PF00254.28 ORF40566 - 2.3e-15 56.7 0.0 8.5e-07 29.2 0.0 2.2 2 0 0 2 2 2 2 FKBP-type peptidyl-prolyl cis-trans isomerase Fimbrial PF00419.20 ORF39757 - 1.3e-11 45.0 0.1 1.6e-11 44.7 0.1 1.1 1 0 0 1 1 1 1 Fimbrial protein Nucleotid_trans PF03407.16 ORF39480 - 0.0072 16.3 0.0 0.0097 15.9 0.0 1.3 1 0 0 1 1 1 1 Nucleotide-diphospho-sugar transferase HEPN_AbiU2 PF18734.1 ORF39287 - 0.0038 16.8 3.1 0.0038 16.8 3.1 1.8 2 0 0 2 2 2 1 AbiU2 Streptin-Immun PF11083.8 ORF39287 - 0.087 13.2 5.3 0.11 12.9 1.9 2.3 2 0 0 2 2 2 0 Lantibiotic streptin immunity protein MORN PF02493.20 ORF38604 - 1.6e-05 24.5 14.8 0.051 13.5 0.3 5.1 6 0 0 6 6 6 3 MORN repeat SRP_SPB PF02978.19 ORF3852 - 0.001 19.6 0.4 0.0022 18.6 0.4 1.5 1 0 0 1 1 1 1 Signal peptide binding domain DUF5457 PF17540.2 ORF3852 - 0.98 9.6 5.3 0.33 11.1 1.7 2.2 2 1 0 2 2 2 0 Family of unknown function (DUF5457) Ehrlichia_rpt PF09528.10 ORF3852 - 0.99 8.9 2.7 0.89 9.1 0.1 2.2 2 1 0 2 2 2 0 Ehrlichia tandem repeat (Ehrlichia_rpt) PQQ_2 PF13360.6 ORF37684 - 3.6e-09 36.6 0.1 4.4e-09 36.3 0.1 1.1 1 0 0 1 1 1 1 PQQ-like domain PQQ_3 PF13570.6 ORF37684 - 9.9e-07 29.1 8.8 0.00018 21.9 1.0 4.7 4 3 0 4 4 4 1 PQQ-like domain PQQ PF01011.21 ORF37684 - 1.8e-05 24.4 2.2 0.057 13.4 0.0 3.3 4 0 0 4 4 4 2 PQQ enzyme repeat HEPN PF05168.14 ORF367 - 6.9e-05 23.0 0.0 8.6e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 HEPN domain CBP_BcsO PF17037.5 ORF34424 - 4.2 7.5 7.1 0.79 9.9 3.1 1.7 1 1 1 2 2 2 0 Cellulose biosynthesis protein BcsO zf-RING_2 PF13639.6 ORF33841 - 2.8e-13 50.0 13.9 5.9e-13 48.9 13.9 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF33841 - 3e-09 36.4 9.0 1.1e-08 34.6 5.5 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF33841 - 1.1e-07 31.5 12.3 2e-07 30.7 12.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF33841 - 1.5e-07 31.3 5.3 1.5e-07 31.3 5.3 2.2 1 1 1 2 2 2 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF33841 - 3.7e-07 30.3 10.7 8e-07 29.3 10.7 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF33841 - 1.5e-06 28.0 10.3 1.5e-06 28.0 10.3 1.7 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF33841 - 2.5e-06 27.3 10.7 5.3e-06 26.2 10.7 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF33841 - 1e-05 25.3 9.8 2e-05 24.3 9.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF33841 - 0.00026 20.8 9.9 0.0005 19.9 9.9 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-Nse PF11789.8 ORF33841 - 0.0012 18.6 5.0 0.0021 17.8 5.0 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-ANAPC11 PF12861.7 ORF33841 - 0.0038 17.3 4.8 0.0066 16.5 4.8 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF33841 - 0.0081 15.8 10.7 0.0083 15.7 8.8 2.0 2 1 0 2 2 2 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF33841 - 0.043 14.0 10.0 1 9.6 10.0 2.7 1 1 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 ORF33841 - 0.82 9.8 11.2 1.5 9.0 10.1 1.9 1 1 1 2 2 2 0 RING-variant domain zf-C3HC4_4 PF15227.6 ORF33841 - 2.3 8.4 11.8 56 4.0 12.4 2.8 1 1 2 3 3 3 0 zinc finger of C3HC4-type, RING Vps39_2 PF10367.9 ORF33841 - 4.7 7.7 10.1 0.17 12.4 3.4 2.2 2 1 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 Sec15 PF04091.12 ORF33638 - 8.6e-07 28.7 3.1 8.6e-07 28.7 3.1 1.9 1 1 1 2 2 2 1 Exocyst complex subunit Sec15-like DUF1188 PF06690.11 ORF33638 - 0.023 14.2 1.5 0.031 13.8 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Suv3_N PF18114.1 ORF33638 - 0.039 14.1 0.3 0.059 13.5 0.2 1.5 1 1 0 1 1 1 0 Suv3 helical N-terminal domain SBDS_C PF09377.10 ORF33638 - 0.077 13.0 0.4 0.077 13.0 0.4 1.9 1 1 1 2 2 2 0 SBDS protein C-terminal domain UDG PF03167.19 ORF33094 - 1.5e-24 86.8 0.0 1.7e-24 86.6 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DUF2150 PF09920.9 ORF31564 - 0.0012 18.8 0.1 0.0023 17.9 0.1 1.5 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) EF-hand_6 PF13405.6 ORF31564 - 0.036 14.0 0.3 0.24 11.4 0.0 2.5 3 0 0 3 3 3 0 EF-hand domain zf-CCCH_6 PF18585.1 ORF31564 - 0.058 13.3 0.2 12 5.8 0.1 2.8 2 1 1 3 3 3 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 DUF1367 PF07105.11 ORF31564 - 0.12 12.0 0.1 0.19 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1367) Pkinase PF00069.25 ORF29879 - 4.8e-39 134.3 0.0 5.5e-39 134.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29879 - 2.3e-17 63.1 0.0 2.6e-17 63.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF29879 - 1.9e-06 27.4 0.0 2.3e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF29879 - 0.00059 18.7 0.0 0.00075 18.4 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF29879 - 0.00076 18.5 0.0 0.0011 18.0 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF29879 - 0.15 11.4 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family BCOR PF15808.5 ORF28586 - 0.041 14.1 1.8 0.063 13.5 1.8 1.3 1 0 0 1 1 1 0 BCL-6 co-repressor, non-ankyrin-repeat region EamA PF00892.20 ORF28516 - 0.002 18.3 8.2 0.0024 18.0 8.2 1.1 1 0 0 1 1 1 1 EamA-like transporter family GPR15L PF15854.5 ORF28508 - 1.5 9.1 9.2 1 9.7 0.9 3.0 1 1 2 3 3 3 0 G-protein coupled receptor ligand 15 zf-met PF12874.7 ORF28141 - 7.6e-07 29.3 0.8 1.3e-06 28.5 0.8 1.4 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF28141 - 1.2e-06 28.7 1.3 1.9e-06 28.0 1.3 1.3 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2_2 PF12756.7 ORF28141 - 0.012 15.9 0.2 0.019 15.3 0.2 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 ORF28141 - 0.015 16.1 0.7 0.033 15.0 0.2 1.9 1 1 0 1 1 1 0 C2H2-type zinc finger LIM PF00412.22 ORF28141 - 0.031 14.5 0.2 0.053 13.7 0.2 1.4 1 0 0 1 1 1 0 LIM domain zf-C2H2 PF00096.26 ORF28141 - 0.086 13.3 1.2 0.23 12.0 1.2 1.8 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf_PR_Knuckle PF18445.1 ORF28141 - 0.11 12.3 0.2 0.2 11.5 0.2 1.3 1 0 0 1 1 1 0 PR zinc knuckle motif Acetyltransf_1 PF00583.25 ORF27742 - 6.4e-09 36.1 0.0 1e-08 35.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF27742 - 3.7e-06 26.9 0.0 5.7e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF27742 - 2.5e-05 24.6 0.0 3.7e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF27742 - 0.051 13.7 0.0 0.22 11.6 0.0 2.1 2 1 0 2 2 2 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF27742 - 0.064 13.2 0.0 0.097 12.6 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Asp_protease PF09668.10 ORF26507 - 1.1e-24 86.6 0.6 1.5e-24 86.2 0.6 1.3 1 0 0 1 1 1 1 Aspartyl protease RVP_2 PF08284.11 ORF26507 - 0.00093 19.0 0.2 0.0016 18.2 0.1 1.5 1 1 0 1 1 1 1 Retroviral aspartyl protease gag-asp_proteas PF13975.6 ORF26507 - 0.0011 19.5 0.1 0.0016 18.9 0.1 1.4 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease UBA PF00627.31 ORF26507 - 0.07 13.1 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 UBA/TS-N domain AAA_18 PF13238.6 ORF25581 - 6.3e-06 26.8 0.1 1.4e-05 25.6 0.1 1.6 1 1 1 2 2 2 1 AAA domain ABC_tran PF00005.27 ORF25581 - 0.00072 20.1 0.6 0.0018 18.8 0.6 1.7 1 1 0 1 1 1 1 ABC transporter Zeta_toxin PF06414.12 ORF25581 - 0.00093 18.5 0.0 0.0016 17.8 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_17 PF13207.6 ORF25581 - 0.0014 19.0 0.0 0.0038 17.6 0.0 1.7 1 1 1 2 2 2 1 AAA domain ADK PF00406.22 ORF25581 - 0.0016 18.5 0.0 0.0031 17.6 0.0 1.5 1 1 0 1 1 1 1 Adenylate kinase Cytidylate_kin PF02224.18 ORF25581 - 0.0017 18.1 0.1 0.0025 17.6 0.1 1.4 1 1 0 1 1 1 1 Cytidylate kinase SKI PF01202.22 ORF25581 - 0.0025 18.0 0.4 0.038 14.1 0.1 2.2 1 1 1 2 2 2 1 Shikimate kinase AAA_33 PF13671.6 ORF25581 - 0.0026 17.9 0.0 0.0035 17.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain TsaE PF02367.17 ORF25581 - 0.0043 17.0 0.0 0.0057 16.6 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF2075 PF09848.9 ORF25581 - 0.0055 16.0 0.0 0.0069 15.7 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) CPT PF07931.12 ORF25581 - 0.014 15.3 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein RsgA_GTPase PF03193.16 ORF25581 - 0.015 15.2 0.1 0.027 14.4 0.1 1.4 1 1 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 ORF25581 - 0.016 14.9 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 ORF25581 - 0.023 14.7 0.2 0.06 13.3 0.0 1.7 1 1 1 2 2 2 0 Rad17 P-loop domain AAA_28 PF13521.6 ORF25581 - 0.074 13.3 0.0 0.094 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain Ploopntkinase1 PF18748.1 ORF25581 - 0.077 12.5 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase1 AAA_16 PF13191.6 ORF25581 - 0.085 13.2 0.0 0.12 12.7 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 ORF25581 - 0.094 13.1 0.1 0.17 12.3 0.1 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 ORF25581 - 0.13 11.6 1.3 0.22 10.9 1.2 1.4 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain Linker_histone PF00538.19 ORF25581 - 0.21 12.0 1.7 1.9 8.9 0.1 2.8 3 0 0 3 3 3 0 linker histone H1 and H5 family Pro_isomerase PF00160.21 ORF24423 - 8.3e-39 133.4 0.0 9.3e-39 133.2 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UQ_con PF00179.26 ORF23512 - 3.7e-41 140.1 0.0 4.2e-41 139.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF23512 - 0.011 15.4 0.0 0.013 15.2 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B UCH PF00443.29 ORF23403 - 5.3e-15 55.6 0.0 6.1e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF23403 - 5e-05 23.0 0.0 5.7e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase FAM209 PF15206.6 ORF20303 - 0.1 12.4 2.6 0.14 12.0 0.7 1.9 2 0 0 2 2 2 0 FAM209 family ABC2_membrane PF01061.24 ORF19674 - 5.5e-23 81.5 9.4 5.5e-23 81.5 9.4 1.4 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF19674 - 2.9e-07 29.9 9.5 3.9e-07 29.5 9.5 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein UCH PF00443.29 ORF18057 - 5.3e-15 55.6 0.0 6.1e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF18057 - 5e-05 23.0 0.0 5.7e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Gln-synt_N PF03951.19 ORF17977 - 4.1e-08 32.8 0.0 6.4e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Sec15 PF04091.12 ORF17397 - 8.6e-07 28.7 3.1 8.6e-07 28.7 3.1 1.9 1 1 1 2 2 2 1 Exocyst complex subunit Sec15-like DUF1188 PF06690.11 ORF17397 - 0.023 14.2 1.5 0.031 13.8 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Suv3_N PF18114.1 ORF17397 - 0.039 14.1 0.3 0.059 13.5 0.2 1.5 1 1 0 1 1 1 0 Suv3 helical N-terminal domain SBDS_C PF09377.10 ORF17397 - 0.077 13.0 0.4 0.077 13.0 0.4 1.9 1 1 1 2 2 2 0 SBDS protein C-terminal domain GST_C_2 PF13410.6 ORF15654 - 2.2e-08 34.0 0.1 3.7e-08 33.3 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Acetyltransf_1 PF00583.25 ORF15531 - 8.4e-05 22.8 0.0 0.00013 22.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF15531 - 8.7e-05 22.9 0.0 0.00015 22.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF15531 - 0.00066 19.6 0.0 0.0012 18.8 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF15531 - 0.02 14.9 0.0 0.062 13.3 0.0 1.8 2 0 0 2 2 2 0 FR47-like protein PanZ PF12568.8 ORF15531 - 0.08 12.7 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ DUF3188 PF11384.8 ORF15299 - 0.29 10.9 2.3 1.7 8.4 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3188) VDE PF07137.11 ORF15180 - 0.00034 20.2 17.2 0.02 14.4 4.8 2.2 2 0 0 2 2 2 2 VDE lipocalin domain ADIP PF11559.8 ORF14661 - 0.0088 16.1 16.6 0.0088 16.1 16.6 2.6 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding FliT PF05400.13 ORF14661 - 0.025 15.4 3.7 0.025 15.4 3.7 2.7 1 1 1 2 2 2 0 Flagellar protein FliT Fez1 PF06818.15 ORF14661 - 1.3 9.5 22.8 5 7.5 22.6 1.8 1 1 1 2 2 2 0 Fez1 DUF1635 PF07795.11 ORF14661 - 5.8 6.7 13.8 0.89 9.4 8.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1635) Spc7 PF08317.11 ORF14661 - 5.9 5.7 27.3 8 5.2 6.1 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein Ribonuc_L-PSP PF01042.21 ORF14517 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP cNMP_binding PF00027.29 ORF14202 - 4.3e-11 42.7 0.0 9.5e-11 41.6 0.0 1.5 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain SOGA PF11365.8 ORF13882 - 0.039 15.1 10.7 0.039 15.1 10.7 2.4 2 1 1 3 3 3 0 Protein SOGA AXH PF08517.12 ORF13882 - 0.26 11.8 6.4 0.079 13.5 1.7 2.0 1 1 1 2 2 2 0 Ataxin-1 and HBP1 module (AXH) DUF1465 PF07323.12 ORF13882 - 0.27 11.1 5.8 0.41 10.5 5.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Herpes_UL6 PF01763.16 ORF13882 - 0.4 9.2 13.2 0.48 8.9 13.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like ABC_tran_CTD PF16326.5 ORF13882 - 0.42 10.9 8.7 0.16 12.2 0.6 2.4 2 0 0 2 2 2 0 ABC transporter C-terminal domain DUF1192 PF06698.11 ORF13882 - 2.6 8.2 7.3 0.35 11.0 0.4 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1192) Uds1 PF15456.6 ORF13882 - 8.5 6.5 19.2 0.27 11.4 6.7 2.1 1 1 1 2 2 2 0 Up-regulated During Septation DHO_dh PF01180.21 ORF13821 - 1.2e-11 44.3 0.0 1.6e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase IMPDH PF00478.25 ORF13821 - 0.0095 15.0 0.0 0.012 14.6 0.0 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 ORF13821 - 0.011 14.8 1.6 0.015 14.3 1.5 1.4 1 1 0 1 1 1 0 FMN-dependent dehydrogenase NMO PF03060.15 ORF13821 - 0.016 14.6 0.3 0.019 14.4 0.3 1.1 1 0 0 1 1 1 0 Nitronate monooxygenase His_biosynth PF00977.21 ORF13821 - 0.019 14.4 0.1 0.027 14.0 0.1 1.3 1 0 0 1 1 1 0 Histidine biosynthesis protein HTH_8 PF02954.19 ORF13821 - 6.9 6.6 6.3 4 7.3 0.1 2.6 3 0 0 3 3 3 0 Bacterial regulatory protein, Fis family Cwf_Cwc_15 PF04889.12 ORF1238 - 0.0003 20.6 10.1 0.00033 20.5 10.1 1.2 1 0 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein ERCC3_RAD25_C PF16203.5 ORF1238 - 0.075 12.2 0.1 0.13 11.4 0.1 1.6 1 1 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase PNISR PF15996.5 ORF1238 - 0.32 11.3 14.0 0.41 10.9 14.0 1.1 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR Pro_isomerase PF00160.21 ORF11949 - 2.4e-42 144.9 0.0 2.7e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sec15 PF04091.12 ORF11611 - 8.6e-07 28.7 3.1 8.6e-07 28.7 3.1 1.9 1 1 1 2 2 2 1 Exocyst complex subunit Sec15-like DUF1188 PF06690.11 ORF11611 - 0.023 14.2 1.5 0.031 13.8 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Suv3_N PF18114.1 ORF11611 - 0.039 14.1 0.3 0.059 13.5 0.2 1.5 1 1 0 1 1 1 0 Suv3 helical N-terminal domain SBDS_C PF09377.10 ORF11611 - 0.077 13.0 0.4 0.077 13.0 0.4 1.9 1 1 1 2 2 2 0 SBDS protein C-terminal domain Ribonuc_L-PSP PF01042.21 ORF112362 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Peptidase_C1 PF00112.23 ORF112284 - 6.2e-14 52.6 0.2 7.2e-14 52.4 0.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF112284 - 0.00025 19.9 0.4 0.0004 19.3 0.3 1.4 1 1 0 1 1 1 1 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF112284 - 0.00073 20.1 0.0 0.001 19.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase_C39 like family Methyltransf_21 PF05050.12 ORF109930 - 5.8e-07 29.7 0.0 6.9e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain RELT PF12606.8 ORF109930 - 0.13 11.3 0.0 0.29 10.2 0.0 1.5 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Kinesin PF00225.23 ORF109152 - 4.8e-06 25.7 0.1 4.8e-06 25.7 0.1 1.8 2 0 0 2 2 2 1 Kinesin motor domain DUF4549 PF15082.6 ORF109152 - 0.002 17.9 0.6 0.0039 17.0 0.6 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4549) RNA_pol PF00940.19 ORF107636 - 5e-54 183.7 0.6 8.4e-53 179.7 0.6 1.9 1 1 0 1 1 1 1 DNA-dependent RNA polymerase TAFII55_N PF04658.13 ORF107636 - 0.038 13.7 0.0 0.045 13.5 0.0 1.2 1 0 0 1 1 1 0 TAFII55 protein conserved region Ependymin PF00811.18 ORF107268 - 0.018 15.3 0.3 2.1 8.6 0.0 2.3 2 0 0 2 2 2 0 Ependymin Peptidase_C39_2 PF13529.6 ORF107268 - 0.027 15.0 0.1 0.043 14.4 0.1 1.5 1 1 0 1 1 1 0 Peptidase_C39 like family Pro_isomerase PF00160.21 ORF107255 - 5.5e-50 169.7 0.7 6.1e-50 169.6 0.7 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ribonuc_L-PSP PF01042.21 ORF107085 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Chorismate_synt PF01264.21 ORF106953 - 2.4e-66 223.7 0.2 2.9e-66 223.4 0.2 1.0 1 0 0 1 1 1 1 Chorismate synthase Spt20 PF12090.8 ORF106419 - 0.022 14.4 0.0 0.03 14.0 0.0 1.2 1 0 0 1 1 1 0 Spt20 family KIX_2 PF16987.5 ORF106419 - 0.082 12.9 0.1 0.97 9.5 0.0 2.1 2 0 0 2 2 2 0 KIX domain UQ_con PF00179.26 ORF106284 - 3.7e-41 140.1 0.0 4.2e-41 139.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF106284 - 0.011 15.4 0.0 0.013 15.2 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B Dehydrin PF00257.19 ORF105553 - 0.00037 21.1 0.7 0.00038 21.1 0.7 1.2 1 0 0 1 1 1 1 Dehydrin DUF755 PF05501.11 ORF105553 - 0.47 10.7 18.8 0.63 10.3 18.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) AP3D1 PF06375.11 ORF105553 - 2.4 8.4 12.6 3 8.1 12.6 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Nsp1_C PF05064.13 ORF105260 - 7.4e-10 38.7 7.2 9.4e-10 38.3 3.8 2.2 2 0 0 2 2 2 1 Nsp1-like C-terminal region GAS PF13851.6 ORF105260 - 0.00046 19.6 1.6 0.00072 19.0 1.5 1.3 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding Bul1_C PF04426.12 ORF105260 - 0.0063 16.0 0.1 0.0071 15.8 0.1 1.1 1 0 0 1 1 1 1 Bul1 C terminus CHASE PF03924.13 ORF105260 - 0.014 15.3 1.4 0.018 15.0 1.4 1.2 1 0 0 1 1 1 0 CHASE domain Snapin_Pallidin PF14712.6 ORF105260 - 0.019 15.3 4.6 0.49 10.9 0.0 2.8 1 1 1 2 2 2 0 Snapin/Pallidin Prefoldin_2 PF01920.20 ORF105260 - 0.02 14.9 5.2 2.4 8.1 0.9 2.8 3 0 0 3 3 3 0 Prefoldin subunit Filament PF00038.21 ORF105260 - 0.046 13.3 7.6 1.1 8.8 0.1 2.0 1 1 1 2 2 2 0 Intermediate filament protein Fib_alpha PF08702.10 ORF105260 - 0.059 13.6 3.0 1.8 8.7 0.1 2.4 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Syntaxin-6_N PF09177.11 ORF105260 - 0.38 11.3 3.1 0.61 10.7 0.6 2.1 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF1664 PF07889.12 ORF105260 - 0.66 10.0 6.1 4.7 7.3 0.2 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 ORF105260 - 1 9.4 4.5 28 4.7 4.5 2.3 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF16 PF01519.16 ORF105260 - 1.2 9.7 6.9 7.8 7.0 2.6 2.7 1 1 1 2 2 2 0 Protein of unknown function DUF16 ZapB PF06005.12 ORF105260 - 1.4 9.4 10.1 12 6.4 0.1 2.7 2 1 0 2 2 2 0 Cell division protein ZapB PP2C PF00481.21 ORF10276 - 5e-16 59.1 0.0 5.7e-16 58.9 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF10276 - 0.075 12.9 0.0 0.094 12.6 0.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) Cob_adeno_trans PF01923.18 ORF101120 - 3.1e-11 43.7 0.0 4.1e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Eco57I PF07669.11 NODE_41210_length_499_cov_2.487069_g33669_i0forward_frame_1 - 0.13 12.7 0.0 0.19 12.3 0.0 1.2 1 0 0 1 1 1 0 Eco57I restriction-modification methylase DUF2367 PF10164.9 NODE_41209_length_499_cov_2.633621_g33668_i0reverse_frame_1 - 0.018 15.5 0.1 0.029 14.9 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) T4SS_CagC PF16943.5 NODE_41209_length_499_cov_2.633621_g33668_i0reverse_frame_1 - 0.033 14.4 0.4 0.051 13.8 0.4 1.4 1 0 0 1 1 1 0 Cag pathogenicity island, type IV secretory system LicD PF04991.13 NODE_41195_length_499_cov_82.855603_g33654_i0forward_frame_1 - 0.028 14.6 0.5 0.035 14.2 0.5 1.2 1 0 0 1 1 1 0 LicD family Lamprin PF06403.11 NODE_41191_length_499_cov_102.224138_g33650_i0forward_frame_1 - 0.0019 18.1 9.5 0.0028 17.6 9.5 1.3 1 0 0 1 1 1 1 Lamprin DUF192 PF02643.15 NODE_41189_length_499_cov_108.911638_g33648_i0reverse_frame_1 - 0.17 12.1 0.0 0.31 11.2 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized ACR, COG1430 DUF3618 PF12277.8 NODE_41181_length_499_cov_179.127155_g33640_i0forward_frame_1 - 0.35 11.2 0.3 0.35 11.2 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3618) DUF5627 PF18620.1 NODE_41154_length_500_cov_2.696774_g33615_i0reverse_frame_1 - 0.66 9.9 3.8 0.3 10.9 0.9 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5627) PPC PF04151.15 NODE_41154_length_500_cov_2.696774_g33615_i0reverse_frame_1 - 1.6 9.9 8.4 4.3 8.5 1.2 2.4 2 1 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain DGF-1_C PF11040.8 NODE_41154_length_500_cov_2.696774_g33615_i0reverse_frame_1 - 6.4 6.8 8.4 8.3 6.5 0.9 2.7 1 1 1 2 2 2 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus dCache_3 PF14827.6 NODE_41154_length_500_cov_2.696774_g33615_i0forward_frame_1 - 0.088 12.4 0.1 0.17 11.5 0.0 1.4 2 0 0 2 2 2 0 Double sensory domain of two-component sensor kinase Ldh_1_N PF00056.23 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_1 - 7.5e-28 97.4 0.1 9.8e-28 97.0 0.1 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Gly_kinase PF02595.15 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_1 - 0.0095 15.0 0.0 0.012 14.6 0.0 1.1 1 0 0 1 1 1 1 Glycerate kinase family Semialdhyde_dh PF01118.24 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_1 - 0.074 13.5 0.2 0.12 12.8 0.2 1.4 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain DUF4574 PF15141.6 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_1 - 0.14 12.1 0.1 0.27 11.2 0.1 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Fimbrial PF00419.20 NODE_41150_length_500_cov_3.673118_g33611_i0forward_frame_1 - 2.3e-08 34.4 1.9 2.9e-08 34.1 1.9 1.1 1 0 0 1 1 1 1 Fimbrial protein Glyco_hydro_42C PF08533.10 NODE_41150_length_500_cov_3.673118_g33611_i0forward_frame_1 - 0.004 16.9 0.3 0.35 10.6 0.0 2.8 2 1 0 2 2 2 1 Beta-galactosidase C-terminal domain RepA_N PF06970.11 NODE_41150_length_500_cov_3.673118_g33611_i0forward_frame_1 - 0.043 13.7 0.2 0.2 11.6 0.0 2.0 2 0 0 2 2 2 0 Replication initiator protein A (RepA) N-terminus Peptidase_C48 PF02902.19 NODE_41149_length_500_cov_3.716129_g33610_i0reverse_frame_1 - 0.2 11.4 4.0 0.12 12.2 2.4 1.4 2 0 0 2 2 2 0 Ulp1 protease family, C-terminal catalytic domain ABC_tran PF00005.27 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 1.3e-14 54.9 0.0 2.1e-14 54.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 1.2e-07 31.9 0.4 1.3e-07 31.8 0.4 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.00047 18.9 0.1 0.00065 18.5 0.1 1.2 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.00057 19.4 0.1 0.00063 19.2 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.021 15.0 0.0 0.19 12.0 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit EspG PF06872.11 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.036 12.6 0.1 0.044 12.3 0.1 1.0 1 0 0 1 1 1 0 EspG protein oligo_HPY PF08352.12 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.041 14.4 0.0 0.084 13.4 0.0 1.5 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region HALZ PF02183.18 NODE_41141_length_500_cov_62.451613_g33602_i0reverse_frame_1 - 0.032 14.4 0.6 0.29 11.4 0.1 2.5 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF4358 PF14270.6 NODE_41141_length_500_cov_62.451613_g33602_i0reverse_frame_1 - 0.036 14.3 0.1 0.075 13.3 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4358) GCR PF02155.15 NODE_41135_length_500_cov_90.212903_g33596_i0reverse_frame_1 - 0.13 11.3 0.1 0.16 11.0 0.1 1.1 1 0 0 1 1 1 0 Glucocorticoid receptor MFS18 PF17352.2 NODE_41134_length_500_cov_90.505376_g33595_i0reverse_frame_1 - 0.72 10.3 6.0 0.081 13.3 1.2 1.9 2 1 0 2 2 2 0 Male Flower Specific protein 18 Chloroa_b-bind PF00504.21 NODE_41134_length_500_cov_90.505376_g33595_i0forward_frame_1 - 2.7e-21 76.8 0.1 3.5e-20 73.1 0.0 2.0 2 0 0 2 2 2 1 Chlorophyll A-B binding protein DUF924 PF06041.11 NODE_41130_length_500_cov_99.021505_g33591_i0forward_frame_1 - 0.17 12.0 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF924) MORN PF02493.20 NODE_41125_length_500_cov_132.126882_g33586_i0reverse_frame_1 - 3.3e-26 89.6 31.5 1.2e-07 31.2 2.6 5.2 5 0 0 5 5 5 5 MORN repeat PKS_DE PF18369.1 NODE_41124_length_500_cov_135.096774_g25584_i1reverse_frame_1 - 0.15 12.7 0.2 0.67 10.6 0.2 1.9 2 0 0 2 2 2 0 Polyketide synthase dimerisation element domain DUF4330 PF14221.6 NODE_41117_length_500_cov_189.976344_g33580_i0reverse_frame_1 - 3.5 7.8 5.6 12 6.0 6.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4330) Glucosamine_iso PF01182.20 NODE_41111_length_500_cov_286.666667_g33575_i0forward_frame_1 - 0.021 14.7 0.0 0.029 14.2 0.0 1.2 1 0 0 1 1 1 0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Ammonium_transp PF00909.21 NODE_41099_length_500_cov_3753.662366_g33565_i0forward_frame_1 - 7.7e-07 28.1 0.0 9.4e-07 27.8 0.0 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF443 PF04276.12 NODE_41097_length_500_cov_10357.440860_g33564_i0reverse_frame_1 - 0.075 12.8 0.2 0.098 12.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF443) Gln-synt_C-ter PF18318.1 NODE_41097_length_500_cov_10357.440860_g33564_i0forward_frame_1 - 4.6e-34 116.8 0.3 7.4e-34 116.1 0.3 1.2 1 0 0 1 1 1 1 Glutamine synthetase C-terminal domain Dor1 PF04124.12 NODE_41097_length_500_cov_10357.440860_g33564_i0forward_frame_1 - 0.072 11.8 0.1 0.18 10.4 0.0 1.6 2 0 0 2 2 2 0 Dor1-like family Cpn60_TCP1 PF00118.24 NODE_41094_length_501_cov_2.403433_g33561_i0forward_frame_1 - 6.5e-40 137.2 0.9 8.5e-40 136.8 0.9 1.1 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PEX-2N PF09263.10 NODE_41092_length_501_cov_2.502146_g33559_i0reverse_frame_1 - 0.17 12.2 0.0 0.35 11.2 0.0 1.4 1 0 0 1 1 1 0 Peroxisome biogenesis factor 1, N-terminal PPR_3 PF13812.6 NODE_41059_length_501_cov_161.626609_g32734_i1forward_frame_1 - 5e-10 39.3 0.0 2.2e-05 24.4 0.0 2.3 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 NODE_41059_length_501_cov_161.626609_g32734_i1forward_frame_1 - 9.1e-09 35.0 0.4 0.027 14.7 0.0 4.1 4 0 0 4 4 4 2 PPR repeat PPR_2 PF13041.6 NODE_41059_length_501_cov_161.626609_g32734_i1forward_frame_1 - 4.4e-07 30.0 0.0 0.0026 17.9 0.0 2.9 1 1 2 3 3 3 2 PPR repeat family TPR_7 PF13176.6 NODE_41059_length_501_cov_161.626609_g32734_i1forward_frame_1 - 0.018 15.1 0.9 0.47 10.6 0.2 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat Clathrin PF00637.20 NODE_41059_length_501_cov_161.626609_g32734_i1forward_frame_1 - 0.037 13.9 0.1 19 5.1 0.0 2.7 2 1 1 3 3 3 0 Region in Clathrin and VPS DUF481 PF04338.12 NODE_41029_length_502_cov_2.535332_g33502_i0forward_frame_3 - 1.6e-29 103.5 9.5 1.8e-29 103.3 9.5 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF481 AAA PF00004.29 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 1e-12 48.6 0.1 1.5e-12 48.0 0.1 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 4.4e-10 40.0 0.0 6.3e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 4.6e-09 36.9 0.0 1.2e-07 32.3 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 5.3e-05 23.2 1.6 0.00016 21.7 1.6 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_19 PF13245.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.00029 21.2 1.1 0.0013 19.1 1.1 1.8 1 1 0 1 1 1 1 AAA domain DUF2075 PF09848.9 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.00052 19.4 0.0 0.0006 19.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) RuvB_N PF05496.12 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.00078 19.2 0.0 0.12 12.1 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.0013 17.9 0.0 0.0017 17.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_7 PF12775.7 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.0017 17.9 0.5 0.0029 17.1 0.2 1.5 1 1 0 1 1 1 1 P-loop containing dynein motor region AAA_11 PF13086.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.0019 18.1 0.5 0.0031 17.3 0.2 1.5 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.0035 17.4 0.5 0.029 14.3 0.5 1.9 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit NACHT PF05729.12 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.011 15.6 0.1 0.023 14.6 0.1 1.5 1 1 0 1 1 1 0 NACHT domain KAP_NTPase PF07693.14 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.017 14.3 2.8 1.3 8.2 0.9 2.0 1 1 1 2 2 2 0 KAP family P-loop domain Zot PF05707.12 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.019 14.6 0.1 0.035 13.7 0.1 1.5 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) GvpD PF07088.11 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.02 13.5 0.0 0.021 13.5 0.0 1.2 1 0 0 1 1 1 0 GvpD gas vesicle protein AAA_32 PF13654.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.027 13.3 0.0 0.038 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.028 13.6 0.0 0.032 13.4 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Poxvirus_B22R_N PF13169.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.033 14.7 0.8 0.093 13.2 0.2 1.9 2 0 0 2 2 2 0 Poxvirus B22R protein N-terminal AAA_30 PF13604.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.056 13.2 0.1 0.095 12.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain DUF3638 PF12340.8 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.058 12.7 0.0 0.071 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3638) T2SSE PF00437.20 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.091 11.8 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.11 12.8 0.1 0.19 12.1 0.1 1.5 1 1 0 1 1 1 0 RNA helicase DUF2670 PF10875.8 NODE_41013_length_502_cov_61.235546_g33486_i0reverse_frame_2 - 2 8.5 13.4 1 9.5 2.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2670) zf-tcix PF14952.6 NODE_41009_length_502_cov_81.548180_g33482_i0reverse_frame_3 - 0.05 13.2 1.4 0.12 12.0 1.4 1.6 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding zf-dskA_traR PF01258.17 NODE_41008_length_502_cov_83.342612_g33481_i0forward_frame_2 - 0.96 9.4 4.2 1.9 8.5 4.2 1.5 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger DUF296 PF03479.15 NODE_41006_length_502_cov_85.950749_g33479_i0reverse_frame_2 - 3.6e-18 65.9 0.3 4.4e-18 65.6 0.3 1.1 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain DUF2457 PF10446.9 NODE_41000_length_502_cov_108.308351_g33474_i0forward_frame_2 - 0.47 9.5 2.4 0.54 9.3 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) ELP6 PF09807.9 NODE_40986_length_502_cov_1278.411135_g32832_i2reverse_frame_2 - 0.14 11.6 0.4 0.19 11.1 0.4 1.1 1 0 0 1 1 1 0 Elongation complex protein 6 PFO_beta_C PF12367.8 NODE_40983_length_503_cov_1.767094_g33461_i0reverse_frame_2 - 0.032 14.4 0.1 0.066 13.4 0.1 1.6 1 0 0 1 1 1 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal ERbeta_N PF12497.8 NODE_40983_length_503_cov_1.767094_g33461_i0reverse_frame_2 - 0.1 12.4 0.3 0.49 10.2 0.1 2.0 2 0 0 2 2 2 0 Estrogen receptor beta PXB PF12828.7 NODE_40977_length_503_cov_2.038462_g33455_i0forward_frame_2 - 0.17 11.8 0.7 0.36 10.8 0.7 1.6 1 1 0 1 1 1 0 PX-associated RabGAP-TBC PF00566.18 NODE_40975_length_503_cov_2.446581_g33453_i0forward_frame_2 - 4.6e-08 33.0 0.0 8.6e-08 32.1 0.0 1.5 1 1 0 1 1 1 1 Rab-GTPase-TBC domain Zap1_zf2 PF18217.1 NODE_40975_length_503_cov_2.446581_g33453_i0forward_frame_2 - 0.2 11.7 0.1 0.46 10.5 0.1 1.5 1 0 0 1 1 1 0 Zap1 zinc finger 2 PAP2 PF01569.21 NODE_40974_length_503_cov_2.480769_g33452_i0reverse_frame_3 - 7.8e-18 64.6 0.8 1.9e-17 63.3 0.0 1.8 1 1 1 2 2 2 2 PAP2 superfamily DUF5325 PF17259.2 NODE_40974_length_503_cov_2.480769_g33452_i0reverse_frame_3 - 0.049 13.5 1.0 0.11 12.4 1.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5325) SNN_linker PF09050.10 NODE_40972_length_503_cov_2.544872_g33450_i0forward_frame_2 - 4 7.3 6.7 4.7 7.1 0.1 3.0 3 0 0 3 3 3 0 Stannin unstructured linker ABC-3 PF00950.17 NODE_40968_length_503_cov_2.914530_g26317_i1reverse_frame_2 - 3.8e-23 82.3 5.3 4.9e-23 81.9 5.3 1.2 1 0 0 1 1 1 1 ABC 3 transport family YndJ PF14158.6 NODE_40968_length_503_cov_2.914530_g26317_i1reverse_frame_2 - 0.023 14.0 4.7 0.02 14.3 2.2 1.8 1 1 1 2 2 2 0 YndJ-like protein TPPII_N PF12583.8 NODE_40968_length_503_cov_2.914530_g26317_i1forward_frame_3 - 0.2 12.2 3.3 0.33 11.5 3.3 1.3 1 0 0 1 1 1 0 Tripeptidyl peptidase II N terminal GDPD PF03009.17 NODE_40965_length_503_cov_3.134615_g33444_i0forward_frame_3 - 2.9e-42 145.2 0.0 3.2e-42 145.1 0.0 1.0 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family Peptidase_S26 PF10502.9 NODE_40960_length_503_cov_3.613248_g33439_i0forward_frame_2 - 6e-08 32.6 0.0 8.4e-08 32.1 0.0 1.3 1 0 0 1 1 1 1 Signal peptidase, peptidase S26 DUF2576 PF10845.8 NODE_40959_length_503_cov_3.739316_g33438_i0reverse_frame_3 - 0.037 13.6 0.6 0.2 11.3 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) CytB6-F_Fe-S PF08802.10 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_3 - 0.056 13.5 0.2 0.12 12.4 0.2 1.5 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit CTV_P13 PF06922.11 NODE_40955_length_503_cov_39.081197_g33434_i0forward_frame_2 - 0.073 13.2 0.1 0.15 12.1 0.1 1.6 1 1 0 1 1 1 0 Citrus tristeza virus P13 protein DUF4138 PF13595.6 NODE_40953_length_503_cov_57.019231_g33432_i0forward_frame_3 - 0.012 14.9 4.0 0.64 9.3 0.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4138) PMP1_2 PF08114.11 NODE_40949_length_503_cov_70.220085_g33429_i0reverse_frame_3 - 0.13 12.0 0.2 0.22 11.3 0.2 1.3 1 0 0 1 1 1 0 ATPase proteolipid family PHD PF00628.29 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 2.9e-05 23.9 9.6 6.7e-05 22.7 9.6 1.7 1 0 0 1 1 1 1 PHD-finger zf-HC5HC2H PF13771.6 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 0.22 11.8 6.2 0.62 10.4 6.2 1.9 1 1 0 1 1 1 0 PHD-like zinc-binding domain Presenilin PF01080.17 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 3.3 6.4 10.7 3.5 6.3 10.7 1.1 1 0 0 1 1 1 0 Presenilin FCP1_C PF09309.10 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 5.7 6.7 24.1 7.2 6.4 24.1 1.1 1 0 0 1 1 1 0 FCP1, C-terminal DnaJ PF00226.31 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_2 - 5.9e-15 55.2 0.4 1e-14 54.4 0.4 1.4 1 0 0 1 1 1 1 DnaJ domain DUF3293 PF11697.8 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_2 - 0.069 13.6 0.1 0.19 12.2 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3293) Nuc_recep-AF1 PF11825.8 NODE_40905_length_504_cov_2.724947_g33388_i0forward_frame_2 - 0.82 9.7 6.2 1.5 8.9 6.2 1.6 1 1 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 PTSIIB_sorb PF03830.15 NODE_40903_length_504_cov_2.833689_g33386_i0reverse_frame_3 - 0.013 15.7 3.4 0.013 15.7 3.4 1.8 1 1 1 2 2 2 0 PTS system sorbose subfamily IIB component Peptidase_S77 PF03420.13 NODE_40903_length_504_cov_2.833689_g33386_i0reverse_frame_3 - 0.073 12.7 0.0 0.14 11.9 0.0 1.4 2 0 0 2 2 2 0 Prohead core protein serine protease CorA PF01544.18 NODE_40901_length_504_cov_3.368870_g33384_i0reverse_frame_2 - 9.3e-16 58.0 0.0 1e-15 57.8 0.0 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein INCENP_N PF12178.8 NODE_40900_length_504_cov_3.791045_g33383_i0reverse_frame_3 - 0.019 15.0 0.1 4.7 7.3 0.0 2.7 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal 7TM_GPCR_Srv PF10323.9 NODE_40900_length_504_cov_3.791045_g33383_i0forward_frame_3 - 0.093 12.1 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srv CPSF_A PF03178.15 NODE_40900_length_504_cov_3.791045_g33383_i0forward_frame_3 - 0.15 11.4 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 CPSF A subunit region ETX_MTX2 PF03318.13 NODE_40898_length_504_cov_16.575693_g33381_i0reverse_frame_3 - 4.6 7.0 31.8 5.9 6.6 31.8 1.2 1 0 0 1 1 1 0 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 DUF3311 PF11755.8 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 0.041 13.8 2.6 0.041 13.8 2.6 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3311) EphA2_TM PF14575.6 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 0.058 14.3 15.9 1.2 10.1 0.9 2.4 2 1 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain ODV-E18 PF10717.9 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 3 7.8 9.8 2.5 8.0 0.9 2.4 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 UPF0182 PF03699.13 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 3.4 5.7 6.5 4.3 5.3 6.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) Tetraspanin PF00335.20 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 4.7 6.9 6.3 6.1 6.5 6.3 1.2 1 0 0 1 1 1 0 Tetraspanin family TssN PF17555.2 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 7.4 5.9 6.8 0.76 9.1 2.0 1.6 2 0 0 2 2 2 0 Type VI secretion system, TssN Apt1 PF10351.9 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_2 - 0.0047 15.8 8.7 0.0048 15.8 8.7 1.0 1 0 0 1 1 1 1 Golgi-body localisation protein domain SPX PF03105.19 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_2 - 0.2 11.5 10.3 0.23 11.3 10.3 1.1 1 0 0 1 1 1 0 SPX domain Presenilin PF01080.17 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_2 - 0.22 10.2 0.8 0.29 9.9 0.8 1.2 1 0 0 1 1 1 0 Presenilin Macoilin PF09726.9 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_2 - 2.9 6.3 13.5 3.5 6.1 13.5 1.1 1 0 0 1 1 1 0 Macoilin family DUF2199 PF09965.9 NODE_40895_length_504_cov_56.328358_g33378_i0forward_frame_3 - 0.067 13.2 0.0 1.4 9.0 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2199) Stb3 PF10330.9 NODE_40895_length_504_cov_56.328358_g33378_i0forward_frame_3 - 0.14 12.2 0.0 1.6 8.8 0.0 2.1 2 0 0 2 2 2 0 Putative Sin3 binding protein HEAT_2 PF13646.6 NODE_40895_length_504_cov_56.328358_g33378_i0forward_frame_2 - 1.3e-07 31.9 8.8 1.4e-05 25.4 1.3 2.2 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 NODE_40895_length_504_cov_56.328358_g33378_i0forward_frame_2 - 0.026 14.8 2.1 1.3 9.4 0.1 3.0 3 0 0 3 3 3 0 HEAT repeat eIF2_C PF09173.11 NODE_40895_length_504_cov_56.328358_g33378_i0forward_frame_2 - 0.061 13.6 0.0 0.092 13.0 0.0 1.3 1 0 0 1 1 1 0 Initiation factor eIF2 gamma, C terminal FNIP PF05725.12 NODE_40873_length_504_cov_221.441365_g33356_i0reverse_frame_3 - 4.2e-10 39.6 0.1 6.3e-10 39.1 0.1 1.2 1 0 0 1 1 1 1 FNIP Repeat FNIP PF05725.12 NODE_40873_length_504_cov_221.441365_g33356_i0reverse_frame_2 - 4.8e-08 33.0 0.1 1.2e-07 31.8 0.1 1.7 1 0 0 1 1 1 1 FNIP Repeat RCC1_2 PF13540.6 ORF99864 - 2.4e-40 135.5 30.2 1.5e-13 50.2 1.2 4.2 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF99864 - 2.8e-06 27.8 31.3 0.52 11.0 0.0 7.3 5 3 1 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat RTBV_P12 PF06361.11 ORF99864 - 0.0038 17.6 0.0 12 6.3 0.0 3.2 1 1 2 3 3 3 2 Rice tungro bacilliform virus P12 protein Kelch_5 PF13854.6 ORF99864 - 0.042 13.9 2.1 8.6 6.5 0.0 3.3 3 0 0 3 3 3 0 Kelch motif DUF902 PF06001.13 ORF99864 - 9.1 6.9 8.4 26 5.4 0.3 4.1 4 1 0 4 4 4 0 Domain of Unknown Function (DUF902) RasGAP PF00616.19 ORF99610 - 0.056 13.1 0.0 0.078 12.7 0.0 1.1 1 0 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase Ion_trans_2 PF07885.16 ORF97730 - 1.2e-13 50.9 1.2 1.6e-13 50.4 1.2 1.2 1 0 0 1 1 1 1 Ion channel EF-hand_7 PF13499.6 ORF97730 - 2.3e-11 44.0 2.8 3.6e-08 33.7 0.5 1.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF97730 - 2.6e-10 40.0 0.4 0.00025 20.8 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF97730 - 2.6e-10 39.1 1.5 0.00054 19.3 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF97730 - 1.1e-09 37.3 0.8 0.00043 19.6 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF97730 - 4.1e-09 35.6 0.6 0.00075 19.2 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain Lig_chan PF00060.26 ORF97730 - 0.0048 16.8 0.0 0.0062 16.4 0.0 1.1 1 0 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF97730 - 0.0099 15.1 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 1 Ion transport protein PerC PF06069.11 ORF97670 - 0.11 12.8 0.1 0.4 11.0 0.1 1.9 2 0 0 2 2 2 0 PerC transcriptional activator DUF4430 PF14478.6 ORF95897 - 0.21 12.2 1.2 0.25 12.0 0.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4430) Aldolase PF01081.19 ORF95672 - 1.9e-24 86.2 0.3 2.3e-24 85.9 0.3 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase TMP-TENI PF02581.17 ORF95672 - 0.0047 16.3 0.1 0.013 14.8 0.0 1.8 1 1 1 2 2 2 1 Thiamine monophosphate synthase Corona_S2 PF01601.16 ORF94679 - 0.24 9.8 0.4 0.3 9.5 0.4 1.1 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein Ribosomal_S5 PF00333.20 ORF94626 - 4.1e-30 103.6 2.6 7.9e-30 102.6 2.6 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 ORF94626 - 4.1e-30 103.0 0.6 7.6e-30 102.2 0.6 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain SICA_alpha PF12887.7 ORF93390 - 0.18 11.7 10.2 0.032 14.1 5.2 1.9 2 0 0 2 2 2 0 SICA extracellular alpha domain YojJ PF10372.9 ORF93390 - 0.37 10.9 0.2 0.37 10.9 0.2 2.6 3 0 0 3 3 3 0 Bacterial membrane-spanning protein N-terminus ComFB PF10719.9 ORF93390 - 0.38 10.9 4.5 5 7.3 4.5 2.4 1 1 0 1 1 1 0 Late competence development protein ComFB ApoLp-III PF07464.11 ORF93390 - 0.51 10.4 11.3 0.78 9.8 0.4 2.2 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) SICA_beta PF12878.7 ORF93390 - 0.78 9.9 12.3 0.58 10.3 9.0 2.0 1 1 1 2 2 2 0 SICA extracellular beta domain DUF4337 PF14235.6 ORF93390 - 1.1 9.4 13.0 0.26 11.4 9.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4337) YtxH PF12732.7 ORF93390 - 1.3 9.6 12.9 1.1 9.9 8.5 2.5 2 1 0 2 2 2 0 YtxH-like protein AAA_23 PF13476.6 ORF93390 - 1.4 9.4 22.4 1.9 8.9 22.3 1.3 1 1 0 1 1 1 0 AAA domain DUF4407 PF14362.6 ORF93390 - 2.2 7.5 11.7 2.7 7.2 11.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Syntaxin-6_N PF09177.11 ORF93390 - 2.5 8.7 10.2 1e+02 3.5 10.2 2.2 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF883 PF05957.13 ORF93390 - 2.9 8.6 5.1 7.6 7.2 1.3 2.3 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) DivIC PF04977.15 ORF93390 - 5.9 6.7 14.9 0.28 11.0 1.5 2.4 2 0 0 2 2 2 0 Septum formation initiator ZapB PF06005.12 ORF93390 - 9 6.8 13.9 2.6e+02 2.1 13.9 2.4 1 1 0 1 1 1 0 Cell division protein ZapB LTXXQ PF07813.12 ORF90865 - 8e-22 77.9 13.1 8e-22 77.9 13.1 1.4 1 1 0 1 1 1 1 LTXXQ motif family protein Metal_resist PF13801.6 ORF90865 - 9.8e-06 25.8 16.1 0.00013 22.2 8.0 2.4 1 1 1 2 2 2 2 Heavy-metal resistance DNA_ligase_A_M PF01068.21 ORF90865 - 0.08 12.6 2.9 2.2 7.9 0.5 2.0 1 1 1 2 2 2 0 ATP dependent DNA ligase domain SF-assemblin PF06705.11 ORF90364 - 0.0013 18.1 26.8 0.016 14.6 26.8 2.6 1 1 0 1 1 1 1 SF-assemblin/beta giardin RecG_N PF17190.4 ORF90364 - 0.0091 16.7 3.2 0.0091 16.7 3.2 2.6 1 1 2 3 3 3 1 RecG N-terminal helical domain RhoGEF67_u2 PF16614.5 ORF90364 - 0.23 11.5 3.1 0.36 10.9 0.2 2.4 2 1 1 3 3 3 0 Unstructured region two on RhoGEF 6 and 7 YmgB PF10798.8 ORF90364 - 0.25 11.2 5.9 0.14 12.0 2.5 2.2 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR S-AdoMet_synt_C PF02773.16 ORF90364 - 0.63 10.0 2.0 1.2 9.1 0.2 2.1 1 1 1 2 2 2 0 S-adenosylmethionine synthetase, C-terminal domain DUF1451 PF07295.11 ORF90364 - 0.76 9.8 14.4 3 7.9 2.4 2.1 1 1 1 2 2 2 0 Zinc-ribbon containing domain DUF4449 PF14613.6 ORF90364 - 0.99 9.5 10.8 0.11 12.6 4.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4449) DUF2115 PF09888.9 ORF90364 - 4.1 7.9 12.1 1.1 9.8 6.4 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2115) M11L PF11099.8 ORF90364 - 4.2 7.6 9.3 2.7 8.3 2.0 2.4 1 1 0 2 2 2 0 Apoptosis regulator M11L like PIN_8 PF18476.1 ORF90364 - 8.6 6.1 15.5 8.5 6.2 7.3 2.0 1 1 1 2 2 2 0 PIN like domain DDE_Tnp_IS1 PF03400.13 ORF88743 - 1.4e-78 261.5 0.9 1.7e-78 261.3 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF88743 - 0.089 13.0 0.5 0.34 11.1 0.5 1.8 1 1 0 1 1 1 0 DDE domain DUF4374 PF14298.6 ORF88517 - 0.038 12.8 0.1 0.048 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4374) MMR_HSR1_Xtn PF16897.5 ORF86403 - 0.0055 16.7 1.9 0.0093 16.0 1.9 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Radical_SAM PF04055.21 ORF86313 - 2.4e-05 24.7 0.1 3.8e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily TRAM PF01938.20 ORF86313 - 0.026 14.5 0.0 0.049 13.6 0.0 1.4 1 0 0 1 1 1 0 TRAM domain OSCP PF00213.18 ORF86191 - 7.2e-19 68.6 0.4 9.9e-19 68.1 0.4 1.2 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit Septin PF00735.18 ORF86191 - 0.0087 15.4 0.2 0.011 15.1 0.2 1.2 1 0 0 1 1 1 1 Septin LRR_6 PF13516.6 ORF86060 - 0.46 10.7 4.5 5.4 7.3 0.1 3.5 3 0 0 3 3 3 0 Leucine Rich repeat DUF4524 PF15025.6 ORF85022 - 0.11 12.3 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4524) PseudoU_synth_2 PF00849.22 ORF84937 - 4.7e-23 82.0 0.0 6e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF2859 PF11072.8 ORF84937 - 0.12 12.1 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) Abhydrolase_3 PF07859.13 ORF8363 - 0.046 13.6 0.1 0.069 13.0 0.1 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold GAGA_bind PF06217.12 ORF83399 - 0.18 12.0 29.8 0.27 11.5 29.8 1.3 1 0 0 1 1 1 0 GAGA binding protein-like family Presenilin PF01080.17 ORF83399 - 3.6 6.2 33.1 4.5 5.9 33.1 1.3 1 0 0 1 1 1 0 Presenilin tRNA_edit PF04073.15 ORF8336 - 1.5e-25 89.7 0.0 1.9e-25 89.3 0.0 1.2 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain Acetyltransf_7 PF13508.7 ORF83345 - 5.8e-11 42.7 0.0 8.5e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF83345 - 3.2e-09 37.0 0.0 4.4e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 ORF83345 - 5.7e-08 32.9 0.0 8.3e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF83345 - 0.0002 21.3 0.0 0.00036 20.5 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF83345 - 0.00028 20.9 0.0 0.00052 20.1 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 ORF83345 - 0.021 14.8 0.1 0.071 13.1 0.0 1.9 2 1 0 2 2 2 0 FR47-like protein Acetyltransf_15 PF17013.5 ORF83345 - 0.022 14.2 0.0 0.029 13.8 0.0 1.2 1 0 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_3 PF13302.7 ORF83345 - 0.092 13.4 0.0 0.22 12.2 0.0 1.6 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain IF4E PF01652.18 ORF81207 - 5.3e-23 81.6 0.6 6.7e-23 81.2 0.6 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E DDE_Tnp_IS1 PF03400.13 ORF80668 - 1.4e-78 261.5 0.9 1.7e-78 261.3 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF80668 - 0.089 13.0 0.5 0.34 11.1 0.5 1.8 1 1 0 1 1 1 0 DDE domain MAPEG PF01124.18 ORF80361 - 1.8e-13 50.5 0.2 2.4e-13 50.1 0.2 1.3 1 0 0 1 1 1 1 MAPEG family MAT1 PF06391.13 ORF79372 - 0.05 13.4 0.2 0.075 12.9 0.2 1.3 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 UNC-50 PF05216.13 ORF79213 - 0.14 11.7 7.5 0.042 13.4 4.3 1.6 1 1 1 2 2 2 0 UNC-50 family Methyltransf_21 PF05050.12 ORF77978 - 0.0015 18.6 0.0 0.0017 18.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain eIF-1a PF01176.19 ORF77683 - 2.2e-17 62.6 0.1 3.7e-17 61.9 0.1 1.4 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Arm PF00514.23 ORF76865 - 0.0095 16.0 0.0 0.079 13.0 0.0 2.3 2 0 0 2 2 2 1 Armadillo/beta-catenin-like repeat V-ATPase_H_N PF03224.14 ORF76865 - 0.058 12.7 0.0 0.074 12.3 0.0 1.1 1 0 0 1 1 1 0 V-ATPase subunit H RRM_1 PF00076.22 ORF74374 - 0.00098 18.9 0.0 0.0075 16.1 0.0 2.2 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CobW_C PF07683.14 ORF74325 - 5.3e-08 32.7 0.1 9.9e-05 22.2 0.0 2.5 2 1 0 2 2 2 2 Cobalamin synthesis protein cobW C-terminal domain DUF2759 PF10958.8 ORF7431 - 0.014 15.1 0.2 0.03 14.1 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) TMEM223 PF14640.6 ORF74006 - 0.029 14.6 0.0 0.05 13.8 0.0 1.3 1 0 0 1 1 1 0 Transmembrane protein 223 DUF2755 PF10954.8 ORF73405 - 0.089 12.7 0.0 0.53 10.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2755) mTERF PF02536.14 ORF7321 - 8.9e-19 67.5 0.0 1e-18 67.4 0.0 1.1 1 0 0 1 1 1 1 mTERF OmpA PF00691.20 ORF72495 - 1.2e-15 57.6 0.0 1.9e-15 57.0 0.0 1.3 1 0 0 1 1 1 1 OmpA family SulA PF03846.14 ORF72495 - 0.024 14.6 0.4 0.07 13.1 0.0 1.8 2 0 0 2 2 2 0 Cell division inhibitor SulA Phage_tail_NK PF16532.5 ORF72495 - 0.1 12.2 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Sf6-type phage tail needle knob or tip of some Caudovirales RCC1_2 PF13540.6 ORF71835 - 1.4e-28 98.0 22.0 4.8e-09 35.8 1.5 4.1 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF71835 - 6.1e-06 26.8 23.2 0.26 11.9 0.1 6.2 5 1 1 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat Pkinase PF00069.25 ORF7178 - 2.8e-09 36.7 1.4 1.1e-08 34.9 0.1 2.1 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7178 - 0.0046 16.3 1.2 0.0087 15.4 0.0 1.9 2 1 0 2 2 2 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF7178 - 0.0051 17.2 0.1 0.034 14.6 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain pair DUF1235 PF06822.12 ORF7178 - 0.01 15.1 0.9 0.013 14.8 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1235) DUF2587 PF10759.9 ORF7178 - 0.017 14.6 0.1 0.029 13.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2587) EF-hand_6 PF13405.6 ORF7178 - 0.019 14.9 0.0 0.089 12.8 0.0 2.2 1 0 0 1 1 1 0 EF-hand domain PAP_fibrillin PF04755.12 ORF7178 - 0.028 14.4 0.3 0.035 14.0 0.3 1.3 1 0 0 1 1 1 0 PAP_fibrillin Citrate_synt PF00285.21 ORF66351 - 4.5e-05 22.7 0.0 6.5e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DDE_Tnp_IS1 PF03400.13 ORF64281 - 1.4e-78 261.5 0.9 1.7e-78 261.3 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF64281 - 0.089 13.0 0.5 0.34 11.1 0.5 1.8 1 1 0 1 1 1 0 DDE domain P_C10 PF14974.6 ORF64032 - 3.5e-05 23.8 0.0 5.2e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Protein C10 DUF3688 PF12461.8 ORF63755 - 0.0034 15.9 0.9 0.0035 15.9 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3688) MSV199 PF10553.9 ORF63755 - 0.043 14.1 1.1 0.3 11.3 0.2 2.0 1 1 0 2 2 2 0 MSV199 domain Porin_6 PF16939.5 ORF63755 - 0.047 12.8 0.9 0.062 12.4 0.9 1.1 1 0 0 1 1 1 0 Putative porin zf-C4_Topoisom PF01396.19 ORF63755 - 0.13 12.1 0.1 0.28 11.0 0.1 1.5 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger RabGAP-TBC PF00566.18 ORF63168 - 8.3e-26 91.0 13.2 1e-25 90.7 13.2 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF2226 PF09987.9 ORF63168 - 0.0031 16.9 0.0 0.0035 16.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2226) Polysacc_deac_1 PF01522.21 ORF63168 - 0.21 11.5 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide deacetylase Caps_synth_GfcC PF06251.11 ORF61116 - 1.6e-69 234.0 0.0 1.8e-69 233.9 0.0 1.0 1 0 0 1 1 1 1 Capsule biosynthesis GfcC Sugar_tr PF00083.24 ORF59700 - 5.5e-28 98.0 10.4 6.1e-28 97.9 10.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF59700 - 0.0016 17.4 13.1 0.0019 17.2 13.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DDE_Tnp_IS1 PF03400.13 ORF58734 - 1.4e-78 261.5 0.9 1.7e-78 261.3 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF58734 - 0.089 13.0 0.5 0.34 11.1 0.5 1.8 1 1 0 1 1 1 0 DDE domain EF-hand_7 PF13499.6 ORF57684 - 7.2e-15 55.2 1.1 1.3e-14 54.3 1.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF57684 - 1e-14 52.9 5.0 1e-06 27.8 0.6 3.1 2 1 1 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF57684 - 3.1e-12 45.4 2.3 2.5e-05 23.5 0.2 2.8 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF57684 - 1.3e-11 44.1 3.1 3.1e-07 30.2 0.3 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF57684 - 5.6e-10 38.3 4.9 3.5e-05 23.4 0.0 3.1 4 0 0 4 4 4 2 EF-hand domain FAM183 PF14886.6 ORF57684 - 5.2e-05 23.9 0.9 6.4e-05 23.6 0.9 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related SPARC_Ca_bdg PF10591.9 ORF57684 - 0.0029 17.9 1.8 0.0049 17.2 0.1 1.9 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region LTXXQ PF07813.12 ORF57684 - 0.021 15.6 0.5 0.033 14.9 0.5 1.3 1 0 0 1 1 1 0 LTXXQ motif family protein Luciferase_3H PF10284.9 ORF57684 - 0.065 13.4 0.1 0.22 11.7 0.0 1.8 2 0 0 2 2 2 0 Luciferase helical bundle domain TPR_11 PF13414.6 ORF57169 - 0.55 10.0 1.3 1.5 8.5 0.3 2.0 2 0 0 2 2 2 0 TPR repeat EF-hand_7 PF13499.6 ORF56641 - 7.2e-15 55.2 1.1 1.3e-14 54.3 1.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF56641 - 1e-14 52.9 5.0 1e-06 27.8 0.6 3.1 2 1 1 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF56641 - 3.1e-12 45.4 2.3 2.5e-05 23.5 0.2 2.8 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF56641 - 1.3e-11 44.1 3.1 3.1e-07 30.2 0.3 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF56641 - 5.6e-10 38.3 4.9 3.5e-05 23.4 0.0 3.1 4 0 0 4 4 4 2 EF-hand domain FAM183 PF14886.6 ORF56641 - 5.2e-05 23.9 0.9 6.4e-05 23.6 0.9 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related SPARC_Ca_bdg PF10591.9 ORF56641 - 0.0029 17.9 1.8 0.0049 17.2 0.1 1.9 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region LTXXQ PF07813.12 ORF56641 - 0.021 15.6 0.5 0.033 14.9 0.5 1.3 1 0 0 1 1 1 0 LTXXQ motif family protein Luciferase_3H PF10284.9 ORF56641 - 0.065 13.4 0.1 0.22 11.7 0.0 1.8 2 0 0 2 2 2 0 Luciferase helical bundle domain Anemone_cytotox PF06369.12 ORF54277 - 0.056 13.1 0.0 0.09 12.4 0.0 1.3 1 0 0 1 1 1 0 Sea anemone cytotoxic protein Ku_PK_bind PF08785.11 ORF53741 - 0.021 15.0 1.4 0.046 13.9 1.4 1.5 1 0 0 1 1 1 0 Ku C terminal domain like EF-hand_1 PF00036.32 ORF52809 - 0.052 13.1 1.2 0.13 11.9 1.2 1.7 1 0 0 1 1 1 0 EF hand DUF2663 PF10864.8 ORF52809 - 0.072 13.5 0.3 0.12 12.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2663) CAF1 PF04857.20 ORF52401 - 2e-11 43.7 0.0 2.5e-11 43.3 0.0 1.1 1 0 0 1 1 1 1 CAF1 family ribonuclease Pkinase PF00069.25 ORF51781 - 3.9e-15 55.9 0.1 5.3e-15 55.5 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF51781 - 1.2e-08 34.6 0.0 1.6e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Cir_Bir_Yir PF06022.11 ORF51781 - 0.0031 17.0 1.7 0.011 15.2 0.2 2.0 2 0 0 2 2 2 1 Plasmodium variant antigen protein Cir/Yir/Bir PglD_N PF17836.1 ORF51781 - 0.038 14.6 0.2 0.095 13.3 0.2 1.6 1 0 0 1 1 1 0 PglD N-terminal domain Yqai PF09466.10 ORF51781 - 0.045 14.1 0.2 0.097 13.0 0.2 1.5 1 0 0 1 1 1 0 Hypothetical protein Yqai Aminotran_1_2 PF00155.21 ORF51285 - 2.5e-31 109.2 0.0 2.8e-31 109.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II RraB PF06877.11 ORF51285 - 0.018 15.8 0.0 0.07 13.9 0.0 1.8 2 0 0 2 2 2 0 Regulator of ribonuclease activity B SPOR PF05036.13 ORF51285 - 0.036 14.4 0.2 2.4 8.6 0.1 2.2 2 0 0 2 2 2 0 Sporulation related domain DUF2567 PF10821.8 ORF51285 - 0.058 13.5 0.5 0.076 13.1 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2567) NTPase_1 PF03266.15 ORF51285 - 0.13 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 NTPase Flg_hook PF02120.16 ORF51285 - 0.14 12.0 0.1 2.8 7.9 0.0 2.6 4 0 0 4 4 4 0 Flagellar hook-length control protein FliK KAR9 PF08580.10 ORF50168 - 0.51 8.8 4.8 0.47 8.9 4.8 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 PrpF PF04303.13 ORF50106 - 4.2e-22 78.6 0.0 5e-22 78.4 0.0 1.0 1 0 0 1 1 1 1 PrpF protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks128.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks128.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks128.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks128.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- 2OG-FeII_Oxy PF03171.20 ORF46628 - 9.4e-14 51.7 0.0 1.2e-13 51.4 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily zf-C2H2 PF00096.26 ORF45970 - 1.1e-07 31.9 15.8 2.7e-06 27.5 3.3 3.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF45970 - 1.7e-06 28.2 1.6 1.7e-06 28.2 1.6 3.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF45970 - 1.6e-05 25.3 13.3 0.00022 21.8 2.7 3.4 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF45970 - 0.0079 16.5 2.3 0.014 15.6 1.9 1.6 1 1 0 1 1 1 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF45970 - 0.022 14.5 0.1 0.022 14.5 0.1 2.0 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-Di19 PF05605.12 ORF45970 - 0.08 13.2 1.2 0.08 13.2 1.2 1.9 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Ribosomal_L28 PF00830.19 ORF45970 - 0.08 13.1 1.4 0.21 11.8 1.4 1.7 1 0 0 1 1 1 0 Ribosomal L28 family zf-met PF12874.7 ORF45970 - 0.41 11.1 8.8 3.1 8.3 1.2 3.5 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF45970 - 3.2 8.1 9.1 0.39 11.1 2.5 2.4 1 1 0 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2HE PF16278.5 ORF45970 - 6.8 7.2 8.7 12 6.5 6.4 2.3 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger NUDIX PF00293.28 ORF45426 - 3.6e-17 62.6 0.0 4.1e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 ORF45426 - 3.2e-05 23.5 0.0 0.00032 20.2 0.0 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4916) ERM PF00769.19 ORF43439 - 0.082 12.7 0.0 0.25 11.1 0.0 1.7 2 0 0 2 2 2 0 Ezrin/radixin/moesin family DDE_Tnp_IS1 PF03400.13 ORF4073 - 1.4e-78 261.5 0.9 1.7e-78 261.3 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF4073 - 0.089 13.0 0.5 0.34 11.1 0.5 1.8 1 1 0 1 1 1 0 DDE domain DUF2019 PF09450.10 ORF39097 - 0.007 16.3 0.1 0.012 15.6 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2019) MORN PF02493.20 ORF38023 - 3e-14 52.0 18.6 1.9e-06 27.4 0.9 5.2 6 1 0 6 6 6 3 MORN repeat ECR1_N PF14382.6 ORF38023 - 0.16 11.8 0.1 3.5 7.5 0.0 2.3 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region MMR_HSR1_Xtn PF16897.5 ORF37933 - 0.0055 16.7 1.9 0.0093 16.0 1.9 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Methyltransf_23 PF13489.6 ORF35336 - 8.8e-16 58.2 0.0 1e-15 58.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF35336 - 1.9e-14 54.1 0.0 3.1e-14 53.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF35336 - 5.6e-11 43.0 0.0 8e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF35336 - 1.3e-09 38.0 0.0 1.4e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF35336 - 3.7e-09 37.2 0.0 5.6e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF35336 - 3.1e-05 23.4 0.0 3.6e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family NodS PF05401.11 ORF35336 - 0.001 18.7 0.0 0.0012 18.5 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Sterol_MT_C PF08498.10 ORF35336 - 0.013 15.7 0.0 0.24 11.7 0.0 2.3 2 0 0 2 2 2 0 Sterol methyltransferase C-terminal TPH PF13868.6 ORF35095 - 0.14 10.6 23.1 0.017 13.6 18.8 1.5 2 0 0 2 2 2 0 Trichohyalin-plectin-homology domain UPF0565 PF10561.9 ORF35095 - 0.57 9.3 11.5 0.62 9.2 11.1 1.3 1 1 0 1 1 1 0 Uncharacterised protein family UPF0565 Corona_7 PF02398.16 ORF33221 - 0.095 13.3 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 Coronavirus protein 7 DUF2959 PF11172.8 ORF31250 - 0.0024 18.1 0.7 0.0029 17.8 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2959) SRP_TPR_like PF17004.5 ORF31250 - 0.24 11.5 5.5 0.91 9.6 5.5 2.0 1 1 0 1 1 1 0 Putative TPR-like repeat Collagen PF01391.18 ORF31007 - 0.067 12.9 6.8 0.1 12.3 6.8 1.2 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) Collagen PF01391.18 ORF30922 - 0.067 12.9 6.8 0.1 12.3 6.8 1.2 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) ECH_1 PF00378.20 ORF30340 - 1.3e-30 106.6 0.2 1.5e-30 106.4 0.2 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF30340 - 1.2e-09 38.1 0.0 1.4e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF1104 PF06518.11 ORF30340 - 0.00029 21.2 1.8 0.00088 19.6 1.8 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1104) Efg1 PF10153.9 ORF30340 - 0.023 15.1 0.6 0.041 14.3 0.6 1.4 1 0 0 1 1 1 0 rRNA-processing protein Efg1 Med28 PF11594.8 ORF30340 - 0.052 13.6 0.0 0.068 13.2 0.0 1.1 1 0 0 1 1 1 0 Mediator complex subunit 28 DDE_Tnp_IS1 PF03400.13 ORF28513 - 1.4e-78 261.5 0.9 1.7e-78 261.3 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF28513 - 0.089 13.0 0.5 0.34 11.1 0.5 1.8 1 1 0 1 1 1 0 DDE domain ABC_trans_CmpB PF06541.11 ORF28048 - 0.14 12.4 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Putative ABC-transporter type IV Proton_antipo_M PF00361.20 ORF27393 - 1.5e-37 129.4 11.5 1.6e-37 129.3 11.5 1.0 1 0 0 1 1 1 1 Proton-conducting membrane transporter CheW PF01584.19 ORF26699 - 7e-36 122.9 1.9 8.1e-36 122.7 1.9 1.0 1 0 0 1 1 1 1 CheW-like domain Med11 PF10280.9 ORF26468 - 0.013 16.0 0.4 0.38 11.2 0.0 2.2 1 1 1 2 2 2 0 Mediator complex protein DUF3774 PF12609.8 ORF26302 - 0.059 14.4 0.1 0.099 13.7 0.1 1.5 1 0 0 1 1 1 0 Wound-induced protein RNA_pol_Rpb1_R PF05001.13 ORF26093 - 0.068 13.5 0.1 20 5.8 0.1 2.9 2 0 0 2 2 2 0 RNA polymerase Rpb1 C-terminal repeat CsrA PF02599.16 ORF26093 - 0.24 11.4 0.2 7.3 6.6 0.0 2.7 3 0 0 3 3 3 0 Global regulator protein family His_Phos_2 PF00328.22 ORF25940 - 2.2e-15 56.9 0.0 1.8e-13 50.6 0.0 2.0 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 2) zf-C2H2_4 PF13894.6 ORF24887 - 0.0056 17.4 5.8 0.12 13.3 0.1 3.0 3 0 0 3 3 3 2 C2H2-type zinc finger Stc1 PF12898.7 ORF24887 - 0.0059 17.1 2.0 0.023 15.2 1.6 2.4 1 1 0 1 1 1 1 Stc1 domain zf-C2H2_2 PF12756.7 ORF24887 - 0.011 16.1 0.3 0.029 14.7 0.0 1.7 2 0 0 2 2 2 0 C2H2 type zinc-finger (2 copies) E6 PF00518.17 ORF24887 - 0.015 15.7 0.3 24 5.4 0.1 3.1 3 0 0 3 3 3 0 Early Protein (E6) zf-C2H2_11 PF16622.5 ORF24887 - 0.021 14.5 0.4 1.4 8.7 0.0 2.6 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-C2H2 PF00096.26 ORF24887 - 0.18 12.3 0.5 0.18 12.3 0.5 2.7 3 0 0 3 3 3 0 Zinc finger, C2H2 type PyrI_C PF02748.15 ORF24887 - 0.2 11.6 1.2 2.4 8.2 0.4 2.6 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2H2_6 PF13912.6 ORF24887 - 0.38 10.8 2.8 2.5 8.2 0.0 2.6 3 0 0 3 3 3 0 C2H2-type zinc finger Wyosine_form PF08608.12 ORF2468 - 1.5e-15 57.3 0.0 2.1e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 Wyosine base formation RCC1_2 PF13540.6 ORF24093 - 1.2e-10 40.8 9.7 0.0061 16.3 0.4 4.2 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF24093 - 7.4e-06 26.2 0.4 10 6.2 0.0 4.0 3 1 1 4 4 4 4 Uncharacterised ACR, YagE family COG1723 PH_TFIIH PF08567.11 ORF24093 - 0.0042 17.4 0.5 1.1 9.7 0.0 2.7 2 1 1 3 3 3 2 TFIIH p62 subunit, N-terminal domain 2OG-FeII_Oxy_3 PF13640.6 ORF23602 - 1.8e-11 44.8 0.0 2.7e-11 44.2 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 ORF23602 - 0.015 15.7 0.0 0.024 15.1 0.0 1.3 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase RecA PF00154.21 ORF23157 - 0.00072 19.1 2.1 0.0009 18.8 2.1 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Spectrin PF00435.21 ORF23157 - 0.015 15.8 0.5 0.09 13.3 0.1 2.1 1 1 1 2 2 2 0 Spectrin repeat Syntaxin_2 PF14523.6 ORF23157 - 6.6 7.2 12.6 1.6 9.2 4.1 2.2 1 1 1 2 2 2 0 Syntaxin-like protein DUF3644 PF12358.8 ORF22966 - 0.52 10.8 3.4 0.67 10.5 0.3 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3644) Med2 PF11214.8 ORF18756 - 0.073 13.2 5.4 0.068 13.3 4.1 1.6 1 1 0 1 1 1 0 Mediator complex subunit 2 DUF2373 PF10180.9 ORF18756 - 0.14 12.0 2.7 0.27 11.1 2.7 1.4 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2373) DUF1794 PF08768.11 ORF18639 - 8.5e-16 58.2 0.0 1e-15 58.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1794) FHA PF00498.26 ORF14628 - 2.1e-08 34.4 0.1 4.4e-08 33.4 0.1 1.6 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF14628 - 0.0015 18.8 0.0 0.0033 17.7 0.0 1.6 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain DDE_Tnp_IS1 PF03400.13 ORF12522 - 1.4e-78 261.5 0.9 1.7e-78 261.3 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF12522 - 0.089 13.0 0.5 0.34 11.1 0.5 1.8 1 1 0 1 1 1 0 DDE domain DUF3694 PF12473.8 ORF12286 - 0.024 15.3 0.2 0.036 14.7 0.2 1.3 1 0 0 1 1 1 0 Kinesin protein BAMBI PF06211.12 ORF12286 - 0.26 11.5 2.8 0.47 10.7 2.1 1.9 1 1 1 2 2 2 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain Mersacidin PF16934.5 ORF12286 - 4.1 7.3 10.2 2.9 7.7 0.4 3.2 3 1 1 4 4 4 0 Two-component Enterococcus faecalis cytolysin (EFC) Ras PF00071.22 ORF111482 - 4.4e-47 159.7 0.8 5e-47 159.5 0.8 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF111482 - 3.1e-33 114.5 0.2 4e-33 114.2 0.2 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF111482 - 5.1e-10 39.1 0.4 6.2e-10 38.8 0.4 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF111482 - 1.5e-06 28.3 0.0 1.9e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF111482 - 0.0054 16.1 0.1 0.0066 15.8 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF111482 - 0.03 14.2 0.0 0.11 12.4 0.0 1.9 1 1 1 2 2 2 0 RsgA GTPase SRPRB PF09439.10 ORF111482 - 0.082 12.3 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit DDE_Tnp_IS1 PF03400.13 ORF110807 - 1.4e-78 261.5 0.9 1.7e-78 261.3 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF110807 - 0.089 13.0 0.5 0.34 11.1 0.5 1.8 1 1 0 1 1 1 0 DDE domain MORN PF02493.20 ORF109659 - 2.9e-16 58.3 17.5 1.5e-08 34.0 3.0 5.2 5 1 0 5 5 5 3 MORN repeat MarC PF01914.17 ORF109410 - 1.5e-54 184.5 7.2 1.6e-54 184.4 7.2 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DUF3784 PF12650.7 ORF109410 - 2.2 8.6 8.7 0.38 11.0 0.5 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF3784) T6SS_Vgr PF13296.6 ORF109041 - 0.03 14.5 0.2 0.049 13.8 0.2 1.4 1 0 0 1 1 1 0 Putative type VI secretion system Rhs element Vgr DUF4976 PF16347.5 ORF108792 - 0.004 17.4 0.4 0.011 16.0 0.1 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4976) BppU_IgG PF18667.1 ORF108792 - 0.068 13.3 0.2 0.14 12.3 0.2 1.7 1 1 0 1 1 1 0 Baseplate upper protein immunoglobulin like domain Amidase PF01425.21 ORF106090 - 1.9e-66 224.9 0.1 2.1e-66 224.8 0.1 1.0 1 0 0 1 1 1 1 Amidase MORN PF02493.20 ORF105771 - 1.7e-16 59.0 27.9 2.6e-06 27.0 0.4 6.2 6 0 0 6 6 6 5 MORN repeat Condensin2nSMC PF12422.8 ORF105264 - 0.0051 17.0 0.0 0.0072 16.5 0.0 1.2 1 0 0 1 1 1 1 Condensin II non structural maintenance of chromosomes subunit Yip1 PF04893.17 ORF104554 - 2.5e-11 43.6 19.2 5e-11 42.6 19.2 1.5 1 1 0 1 1 1 1 Yip1 domain DUF4199 PF13858.6 ORF104554 - 3.8 7.9 13.5 1.2 9.5 10.6 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) DDE_Tnp_IS1 PF03400.13 ORF104355 - 1.4e-78 261.5 0.9 1.7e-78 261.3 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF104355 - 0.089 13.0 0.5 0.34 11.1 0.5 1.8 1 1 0 1 1 1 0 DDE domain IFT20 PF14931.6 ORF104046 - 0.016 15.3 2.0 0.022 14.9 0.2 1.9 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 CbiX PF01903.17 ORF104046 - 0.043 14.1 0.0 0.067 13.5 0.0 1.4 1 0 0 1 1 1 0 CbiX Polysacc_synt_C PF14667.6 ORF102023 - 2.1e-05 24.6 7.6 2.1e-05 24.6 7.6 2.0 2 0 0 2 2 2 2 Polysaccharide biosynthesis C-terminal domain Neil1-DNA_bind PF09292.10 ORF101280 - 0.3 11.1 8.3 43 4.2 0.1 4.2 4 0 0 4 4 4 0 Endonuclease VIII-like 1, DNA bind SAM_1 PF00536.30 ORF101198 - 4.6e-06 27.0 0.0 6.8e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 ORF101198 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) RCC1 PF00415.18 ORF101198 - 0.0024 18.4 0.2 0.0063 17.1 0.1 1.7 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat PapA_C PF16911.5 ORF100603 - 0.046 13.8 0.0 0.061 13.4 0.0 1.2 1 0 0 1 1 1 0 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus TssO PF17561.2 NODE_41391_length_496_cov_1.989154_g33838_i0forward_frame_1 - 8.1 6.5 11.6 0.38 10.9 4.5 2.0 1 1 1 2 2 2 0 Type VI secretion system, TssO UPF0259 PF06790.11 NODE_41387_length_496_cov_2.145336_g33834_i0forward_frame_1 - 1.2e-41 143.2 0.4 1.3e-41 143.0 0.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0259) Dexa_ind PF15198.6 NODE_41387_length_496_cov_2.145336_g33834_i0forward_frame_1 - 0.012 15.7 0.1 0.018 15.1 0.1 1.2 1 0 0 1 1 1 0 Dexamethasone-induced SDF PF00375.18 NODE_41387_length_496_cov_2.145336_g33834_i0forward_frame_1 - 0.016 14.3 1.4 0.019 14.0 1.4 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family UPF0047 PF01894.17 NODE_41377_length_496_cov_4.119306_g33824_i0reverse_frame_1 - 0.091 12.9 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0047 Methyltransf_31 PF13847.6 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 5.2e-13 49.1 0.0 6.5e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 2.8e-08 34.4 0.0 1e-07 32.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 3.7e-06 26.6 0.0 7.1e-06 25.7 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.18 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 4.3e-06 26.5 0.0 5.7e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_12 PF08242.12 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 5e-06 27.2 0.0 3.8e-05 24.4 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 6.9e-05 22.3 0.0 7.8e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_11 PF08241.12 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.00044 20.8 0.0 0.0029 18.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.00072 19.0 0.0 0.0012 18.3 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.6 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.00097 19.0 0.0 0.073 12.9 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.0018 17.9 0.0 0.0031 17.2 0.0 1.4 1 1 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.0052 16.4 0.0 0.0058 16.2 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.035 13.8 0.0 0.036 13.8 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein rRNA_methylase PF06962.12 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.18 11.8 0.0 0.39 10.7 0.0 1.5 1 1 0 1 1 1 0 Putative rRNA methylase DUF3328 PF11807.8 NODE_41369_length_496_cov_58.318872_g33816_i0reverse_frame_1 - 0.13 12.0 3.4 0.7 9.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3328) Choline_transpo PF04515.12 NODE_41364_length_496_cov_74.522777_g24947_i1reverse_frame_1 - 3.2e-09 36.4 3.1 3.7e-09 36.2 3.1 1.2 1 0 0 1 1 1 1 Plasma-membrane choline transporter DUF1961 PF09224.11 NODE_41362_length_496_cov_82.802603_g33810_i0forward_frame_1 - 0.24 10.7 0.0 0.43 9.9 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1961) TolA PF06519.11 NODE_41357_length_496_cov_98.932755_g33805_i0reverse_frame_1 - 0.028 14.6 0.0 0.051 13.8 0.0 1.4 1 0 0 1 1 1 0 TolA C-terminal Phage_holin_3_5 PF16085.5 NODE_41357_length_496_cov_98.932755_g33805_i0reverse_frame_1 - 0.17 12.0 1.8 5 7.3 0.1 2.2 2 0 0 2 2 2 0 Bacteriophage holin Hol, superfamily III RTC4 PF14474.6 NODE_41348_length_496_cov_197.308026_g33797_i0forward_frame_1 - 0.0057 16.8 2.2 0.011 15.9 2.2 1.5 1 0 0 1 1 1 1 RTC4-like domain LRR_4 PF12799.7 NODE_41348_length_496_cov_197.308026_g33797_i0forward_frame_1 - 1.4 9.4 6.2 0.39 11.2 1.2 2.5 3 1 0 3 3 3 0 Leucine Rich repeats (2 copies) Ac76 PF05814.11 NODE_41326_length_496_cov_40423.468547_g30537_i8forward_frame_1 - 0.044 13.8 2.1 0.044 13.8 2.1 2.3 1 1 0 2 2 2 0 Orf76 (Ac76) DUF4993 PF16384.5 NODE_41322_length_497_cov_1.755411_g33774_i0forward_frame_1 - 0.032 13.2 0.0 0.047 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function PetM PF08041.11 NODE_41311_length_497_cov_2.816017_g33763_i0reverse_frame_1 - 0.12 12.0 0.3 0.29 10.7 0.3 1.7 1 0 0 1 1 1 0 PetM family of cytochrome b6f complex subunit 7 Laminin_G_1 PF00054.23 NODE_41311_length_497_cov_2.816017_g33763_i0forward_frame_1 - 0.12 12.6 0.1 0.18 12.0 0.1 1.2 1 0 0 1 1 1 0 Laminin G domain Bac_small_YrzI PF09501.10 NODE_41311_length_497_cov_2.816017_g33763_i0forward_frame_1 - 0.31 11.2 1.7 0.67 10.1 1.7 1.5 1 0 0 1 1 1 0 Probable sporulation protein (Bac_small_yrzI) DUF1053 PF06327.14 NODE_41311_length_497_cov_2.816017_g33763_i0forward_frame_1 - 0.31 11.6 2.2 0.98 10.0 0.5 2.0 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) TSC22 PF01166.18 NODE_41310_length_497_cov_3.376623_g33762_i0reverse_frame_1 - 0.025 14.9 0.3 0.097 13.0 0.2 2.0 2 0 0 2 2 2 0 TSC-22/dip/bun family Shugoshin_N PF07558.11 NODE_41310_length_497_cov_3.376623_g33762_i0reverse_frame_1 - 0.056 13.3 0.2 0.056 13.3 0.2 1.8 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region PRKG1_interact PF15898.5 NODE_41310_length_497_cov_3.376623_g33762_i0reverse_frame_1 - 0.073 14.0 1.1 0.073 14.0 1.1 1.9 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain UPF0051 PF01458.17 NODE_41310_length_497_cov_3.376623_g33762_i0reverse_frame_1 - 0.083 12.6 0.1 0.083 12.6 0.1 2.0 2 0 0 2 2 2 0 Uncharacterized protein family (UPF0051) Rsbr_N PF08678.10 NODE_41307_length_497_cov_5.188312_g33759_i0reverse_frame_1 - 0.043 13.9 1.2 0.043 13.9 1.2 1.9 2 1 1 3 3 3 0 Rsbr N terminal XH PF03469.14 NODE_41307_length_497_cov_5.188312_g33759_i0reverse_frame_1 - 0.15 11.9 3.5 5 7.0 1.0 2.1 1 1 1 2 2 2 0 XH domain DUF1741 PF08427.10 NODE_41307_length_497_cov_5.188312_g33759_i0reverse_frame_1 - 0.24 11.0 6.2 0.33 10.6 5.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1741) Afaf PF15339.6 NODE_41279_length_497_cov_192.006494_g33731_i0reverse_frame_1 - 2.5 7.8 13.7 7.2 6.3 13.7 1.7 1 1 0 1 1 1 0 Acrosome formation-associated factor Carb_bind PF10645.9 NODE_41275_length_497_cov_343.134199_g33727_i0reverse_frame_1 - 0.07 13.4 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 Carbohydrate binding UPF0158 PF03682.13 NODE_41273_length_497_cov_364.662338_g33353_i1reverse_frame_1 - 0.12 12.3 1.2 0.18 11.7 1.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) Tachystatin_A PF11406.8 NODE_41264_length_498_cov_2.792657_g33719_i0reverse_frame_1 - 0.023 14.8 1.1 0.023 14.8 1.1 2.0 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A Ycf70 PF17382.2 NODE_41262_length_498_cov_3.215983_g33717_i0reverse_frame_1 - 0.067 13.6 1.0 0.14 12.5 1.0 1.6 1 0 0 1 1 1 0 Uncharacterized Ycf70-like DUF4149 PF13664.6 NODE_41262_length_498_cov_3.215983_g33717_i0forward_frame_1 - 0.044 14.1 2.7 0.14 12.4 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4149) Nore1-SARAH PF16517.5 NODE_41259_length_498_cov_3.568035_g33714_i0forward_frame_1 - 2.2 8.3 4.8 0.3 11.0 0.7 1.7 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain UPF0561 PF10573.9 NODE_41255_length_498_cov_20.481641_g33710_i0reverse_frame_1 - 1.8 8.7 4.4 3.1 8.0 4.4 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 PEP-utilizers PF00391.23 NODE_41243_length_498_cov_89.691145_g33698_i0forward_frame_1 - 0.021 14.5 0.4 0.033 13.9 0.4 1.3 1 0 0 1 1 1 0 PEP-utilising enzyme, mobile domain zf-LITAF-like PF10601.9 NODE_41241_length_498_cov_94.654428_g33696_i0reverse_frame_1 - 0.019 15.2 1.8 0.019 15.2 1.8 1.8 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain EF-hand_7 PF13499.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 5e-16 58.9 5.3 1.2e-11 44.8 0.3 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 3.7e-11 41.8 4.1 7.2e-05 22.1 0.3 3.0 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 5.4e-11 41.5 3.6 0.00011 21.8 0.0 3.3 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 1.4e-06 27.5 4.2 0.0022 17.4 0.2 2.8 2 0 0 2 2 2 2 EF hand EF-hand_10 PF14788.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 1.2e-05 25.1 1.3 0.042 13.7 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 0.00052 19.8 3.7 0.056 13.3 0.2 2.3 1 1 1 2 2 2 2 EF-hand domain pair ATP-cone PF03477.16 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 0.041 14.5 0.2 0.095 13.3 0.2 1.6 1 1 0 1 1 1 0 ATP cone domain SGS PF05002.15 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 0.052 13.7 0.2 0.37 10.9 0.7 2.1 2 0 0 2 2 2 0 SGS domain DUF1285 PF06938.11 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 0.13 12.3 0.1 0.26 11.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1285) DUF2267 PF10025.9 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 0.13 12.5 0.0 0.32 11.3 0.0 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) HTH_Tnp_Tc5 PF03221.16 NODE_41212_length_499_cov_2.142241_g33671_i0forward_frame_3 - 0.072 13.1 0.2 0.12 12.5 0.2 1.4 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain BRD4_CDT PF17105.5 NODE_41207_length_499_cov_3.301724_g33666_i0reverse_frame_3 - 0.042 13.5 0.2 0.072 12.7 0.2 1.3 1 0 0 1 1 1 0 C-terminal domain of bromodomain protein 4 ABC_tran PF00005.27 NODE_41205_length_499_cov_4.165948_g33664_i0forward_frame_2 - 1.4e-11 45.0 0.0 2.3e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_41205_length_499_cov_4.165948_g33664_i0forward_frame_2 - 0.008 16.0 0.0 0.0091 15.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF5480 PF17576.2 NODE_41202_length_499_cov_11.256466_g33661_i0forward_frame_3 - 1.2 9.2 5.7 2.2 8.3 5.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5480) YqfD PF06898.11 NODE_41202_length_499_cov_11.256466_g33661_i0forward_frame_3 - 5.6 5.7 4.8 7 5.4 4.8 1.1 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD Methyltransf_15 PF09445.10 NODE_41200_length_499_cov_36.049569_g33659_i0reverse_frame_2 - 0.2 11.2 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase ArsP_1 PF03773.13 NODE_41200_length_499_cov_36.049569_g33659_i0forward_frame_3 - 0.0015 17.7 0.0 0.0015 17.7 0.0 1.1 1 0 0 1 1 1 1 Predicted permease RRN3 PF05327.11 NODE_41200_length_499_cov_36.049569_g33659_i0forward_frame_3 - 0.7 8.4 2.5 0.83 8.1 2.5 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 MT PF12777.7 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 2.7e-14 53.0 4.8 3.2e-14 52.7 4.8 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor COG6 PF06419.11 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 0.0094 14.2 2.7 0.015 13.5 2.7 1.3 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 Translin PF01997.16 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 0.012 15.6 0.1 0.019 14.9 0.1 1.3 1 0 0 1 1 1 0 Translin family Sec8_exocyst PF04048.14 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 0.021 14.7 0.7 0.045 13.6 0.7 1.5 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain TPR_MLP1_2 PF07926.12 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 0.027 14.6 4.8 0.047 13.8 4.8 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein UQ_con PF00179.26 NODE_41198_length_499_cov_49.250000_g33657_i0forward_frame_3 - 0.00093 18.9 0.0 0.0016 18.1 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme PROCN PF08083.11 NODE_41198_length_499_cov_49.250000_g33657_i0forward_frame_3 - 0.057 12.1 0.0 0.073 11.8 0.0 1.2 1 0 0 1 1 1 0 PROCN (NUC071) domain BAH PF01426.18 NODE_41195_length_499_cov_82.855603_g33654_i0reverse_frame_3 - 0.015 15.2 0.0 0.02 14.8 0.0 1.2 1 0 0 1 1 1 0 BAH domain Lamprin PF06403.11 NODE_41191_length_499_cov_102.224138_g33650_i0forward_frame_3 - 0.00012 22.1 4.1 0.00015 21.7 4.1 1.2 1 0 0 1 1 1 1 Lamprin zf-RanBP PF00641.18 NODE_41190_length_499_cov_103.040948_g33649_i0reverse_frame_2 - 0.025 13.9 1.5 0.044 13.1 1.5 1.3 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DZR PF12773.7 NODE_41190_length_499_cov_103.040948_g33649_i0reverse_frame_2 - 0.046 13.7 0.9 0.093 12.8 0.9 1.5 1 0 0 1 1 1 0 Double zinc ribbon DUF35_N PF12172.8 NODE_41190_length_499_cov_103.040948_g33649_i0reverse_frame_2 - 0.066 13.1 1.0 0.14 12.1 1.0 1.5 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) HTH_20 PF12840.7 NODE_41190_length_499_cov_103.040948_g33649_i0reverse_frame_2 - 0.14 12.2 1.4 0.24 11.5 0.0 2.1 2 1 1 3 3 3 0 Helix-turn-helix domain Prenyltrans PF00432.21 NODE_41190_length_499_cov_103.040948_g33649_i0forward_frame_3 - 0.13 12.1 0.6 0.29 10.9 0.6 1.6 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat Pox_A3L PF05288.11 NODE_41189_length_499_cov_108.911638_g33648_i0forward_frame_3 - 0.048 13.7 0.1 2.2 8.4 0.0 2.4 2 0 0 2 2 2 0 Poxvirus A3L Protein ETRAMP PF09716.10 NODE_41186_length_499_cov_119.834052_g33645_i0reverse_frame_2 - 0.71 10.0 6.0 1.3 9.1 5.9 1.7 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Flavin_Reduct PF01613.18 NODE_41179_length_499_cov_218.032328_g33638_i0forward_frame_3 - 0.093 12.8 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Flavin reductase like domain DNA_pol3_delta PF06144.13 NODE_41176_length_499_cov_237.829741_g33635_i0forward_frame_2 - 0.084 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Proton_antipo_C PF01010.19 NODE_41168_length_499_cov_620.713362_g33628_i0reverse_frame_2 - 0.091 12.4 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus PCP PF02429.15 NODE_41163_length_499_cov_1486.693966_g33623_i0reverse_frame_2 - 1e-39 136.2 1.6 1.4e-39 135.7 1.6 1.2 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein Neur_chan_LBD PF02931.23 NODE_41159_length_500_cov_1.993548_g33620_i0forward_frame_2 - 1.6e-26 93.1 0.5 1.9e-26 92.9 0.5 1.0 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel ligand binding domain Pkinase PF00069.25 NODE_41157_length_500_cov_2.236559_g33618_i0reverse_frame_3 - 6.6e-24 84.7 0.0 8.5e-24 84.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_41157_length_500_cov_2.236559_g33618_i0reverse_frame_3 - 2.5e-16 59.8 0.0 3.2e-16 59.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_41157_length_500_cov_2.236559_g33618_i0reverse_frame_3 - 0.008 15.5 0.0 0.017 14.4 0.0 1.6 1 1 1 2 2 2 1 Kinase-like Pkinase PF00069.25 NODE_41157_length_500_cov_2.236559_g33618_i0reverse_frame_2 - 0.00011 21.6 0.0 0.00019 20.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain DUF5450 PF17529.2 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_3 - 1.1 9.3 6.6 2.4 8.3 6.6 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5450) PIEZO PF15917.5 NODE_41150_length_500_cov_3.673118_g33611_i0reverse_frame_2 - 0.011 15.2 2.0 0.016 14.7 2.0 1.2 1 0 0 1 1 1 0 Piezo Lig_chan PF00060.26 NODE_41144_length_500_cov_9.298925_g33605_i0reverse_frame_2 - 0.016 15.0 1.7 0.033 14.0 1.7 1.5 1 1 0 1 1 1 0 Ligand-gated ion channel AAA_lid_8 PF17868.1 NODE_41144_length_500_cov_9.298925_g33605_i0forward_frame_3 - 0.04 13.8 0.6 0.089 12.7 0.6 1.5 1 0 0 1 1 1 0 AAA lid domain CAMSAP_CKK PF08683.11 NODE_41131_length_500_cov_92.533333_g33592_i0reverse_frame_3 - 4.9e-13 49.3 0.0 6.5e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 Microtubule-binding calmodulin-regulated spectrin-associated Rhodanese_C PF12368.8 NODE_41131_length_500_cov_92.533333_g33592_i0reverse_frame_2 - 0.031 14.6 1.5 0.031 14.6 1.5 2.1 2 0 0 2 2 2 0 Rhodanase C-terminal HNF-1B_C PF04812.13 NODE_41131_length_500_cov_92.533333_g33592_i0forward_frame_3 - 0.056 13.3 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus Colicin_K PF17500.2 NODE_41131_length_500_cov_92.533333_g33592_i0forward_frame_3 - 2.3 8.8 9.3 0.53 10.9 1.9 2.6 1 1 2 3 3 3 0 Colicin-K Mito_fiss_reg PF05308.11 NODE_41130_length_500_cov_99.021505_g33591_i0reverse_frame_3 - 0.07 13.2 1.5 0.081 13.0 1.5 1.3 1 1 0 1 1 1 0 Mitochondrial fission regulator SelK_SelG PF10961.8 NODE_41130_length_500_cov_99.021505_g33591_i0forward_frame_2 - 0.029 15.0 0.6 0.11 13.2 0.8 1.7 2 0 0 2 2 2 0 Selenoprotein SelK_SelG MORN PF02493.20 NODE_41125_length_500_cov_132.126882_g33586_i0reverse_frame_2 - 1.1e-11 43.9 1.9 1.3e-09 37.4 0.5 2.5 2 0 0 2 2 2 2 MORN repeat IL6 PF00489.17 NODE_41124_length_500_cov_135.096774_g25584_i1reverse_frame_2 - 0.13 11.9 0.2 1.6 8.3 0.1 2.0 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family RIFIN PF02009.16 NODE_41117_length_500_cov_189.976344_g33580_i0forward_frame_3 - 0.023 14.6 0.1 0.023 14.6 0.1 1.5 2 0 0 2 2 2 0 Rifin FAM176 PF14851.6 NODE_41117_length_500_cov_189.976344_g33580_i0forward_frame_3 - 0.11 12.2 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 FAM176 family Cortexin PF11057.8 NODE_41117_length_500_cov_189.976344_g33580_i0forward_frame_3 - 0.13 12.2 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Cortexin of kidney PHD_4 PF16866.5 NODE_41099_length_500_cov_3753.662366_g33565_i0reverse_frame_2 - 0.089 12.9 0.5 0.089 12.9 0.5 1.9 2 0 0 2 2 2 0 PHD-finger DUF1661 PF07877.11 NODE_41094_length_501_cov_2.403433_g33561_i0forward_frame_3 - 0.11 12.3 2.0 0.15 11.7 1.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1661) BPD_transp_2 PF02653.16 NODE_41088_length_501_cov_2.929185_g33555_i0reverse_frame_3 - 8.1e-29 100.6 16.4 9.4e-29 100.4 16.4 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component TRI9 PF08195.11 NODE_41088_length_501_cov_2.929185_g33555_i0reverse_frame_3 - 0.096 12.6 0.2 0.18 11.7 0.2 1.5 1 0 0 1 1 1 0 TRI9 protein Herpes_BLLF1 PF05109.13 NODE_41080_length_501_cov_11.626609_g32616_i1forward_frame_3 - 0.48 8.3 11.7 0.6 8.0 11.7 1.0 1 0 0 1 1 1 0 Herpes virus major outer envelope glycoprotein (BLLF1) EcoRII-C PF09019.11 NODE_41078_length_501_cov_64.875536_g33546_i0forward_frame_2 - 0.0034 17.5 1.3 0.005 16.9 0.7 1.6 1 1 1 2 2 2 1 EcoRII C terminal DUF3918 PF13056.6 NODE_41078_length_501_cov_64.875536_g33546_i0forward_frame_2 - 0.0095 15.5 0.2 0.023 14.3 0.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3918) Peptidase_M32 PF02074.15 NODE_41078_length_501_cov_64.875536_g33546_i0forward_frame_2 - 0.018 13.9 2.3 0.022 13.6 2.3 1.3 1 0 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase DUF4976 PF16347.5 NODE_41076_length_501_cov_69.686695_g33544_i0reverse_frame_2 - 0.0045 17.2 4.5 0.0045 17.2 4.5 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4976) EF1_GNE PF00736.19 NODE_41076_length_501_cov_69.686695_g33544_i0reverse_frame_2 - 0.22 11.7 2.5 0.7 10.1 0.3 2.1 1 1 0 2 2 2 0 EF-1 guanine nucleotide exchange domain ARHGEF5_35 PF15441.6 NODE_41076_length_501_cov_69.686695_g33544_i0reverse_frame_2 - 0.37 9.7 4.8 0.44 9.5 4.8 1.0 1 0 0 1 1 1 0 Rho guanine nucleotide exchange factor 5/35 RexB PF15968.5 NODE_41071_length_501_cov_81.952790_g33539_i0forward_frame_2 - 0.051 14.0 0.9 0.076 13.5 0.9 1.2 1 0 0 1 1 1 0 Membrane-anchored ion channel, Abi component U-box PF04564.15 NODE_41064_length_501_cov_106.847639_g33532_i0reverse_frame_3 - 7.8e-18 64.4 0.1 9.6e-17 60.9 0.0 2.2 2 1 0 2 2 2 1 U-box domain zf-Nse PF11789.8 NODE_41064_length_501_cov_106.847639_g33532_i0reverse_frame_3 - 0.003 17.3 0.1 0.079 12.8 0.1 2.3 1 1 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_10 PF16685.5 NODE_41064_length_501_cov_106.847639_g33532_i0reverse_frame_3 - 0.0074 16.4 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 zinc RING finger of MSL2 DUF4131 PF13567.6 NODE_41064_length_501_cov_106.847639_g33532_i0forward_frame_2 - 0.15 11.7 2.3 0.25 11.0 2.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Cyto_heme_lyase PF01265.17 ORF99985 - 4.9e-35 121.5 0.7 3.4e-34 118.8 0.7 1.9 1 1 0 1 1 1 1 Cytochrome c/c1 heme lyase BPD_transp_1 PF00528.22 ORF99373 - 1.2e-15 57.8 6.3 1.5e-15 57.4 6.3 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Deltameth_res PF16020.5 ORF99373 - 1.2 9.1 3.5 0.45 10.4 0.6 1.8 2 0 0 2 2 2 0 Deltamethrin resistance HTH_23 PF13384.6 ORF98879 - 2.7e-06 27.0 0.3 8.4e-06 25.4 0.1 1.8 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 ORF98879 - 2.5e-05 24.3 0.0 0.00024 21.2 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.6 ORF98879 - 0.0011 18.9 0.1 0.0026 17.7 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn helix TnsD PF15978.5 ORF98879 - 0.0017 17.4 0.6 0.0019 17.2 0.6 1.1 1 0 0 1 1 1 1 Tn7-like transposition protein D HTH_Tnp_ISL3 PF13542.6 ORF98879 - 0.0024 17.2 0.0 0.11 12.0 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 Sigma70_r4_2 PF08281.12 ORF98879 - 0.039 13.6 0.0 0.091 12.4 0.0 1.7 1 0 0 1 1 1 0 Sigma-70, region 4 Pfk_N PF18468.1 ORF98879 - 0.071 13.5 0.1 0.29 11.6 0.1 1.8 1 1 1 2 2 2 0 Phosphofructokinase N-terminal domain yeast HTH_Tnp_1 PF01527.20 ORF98879 - 0.078 13.3 0.1 0.12 12.7 0.1 1.4 1 0 0 1 1 1 0 Transposase HTH_3 PF01381.22 ORF98879 - 0.08 13.0 0.1 0.16 12.1 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix Phytochelatin PF05023.14 ORF98879 - 0.13 11.4 1.8 0.21 10.8 1.8 1.4 1 1 0 1 1 1 0 Phytochelatin synthase HTH_8 PF02954.19 ORF98879 - 0.21 11.4 1.1 0.91 9.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family Peptidase_C1 PF00112.23 ORF97171 - 6.5e-22 78.7 0.7 8e-22 78.4 0.7 1.1 1 0 0 1 1 1 1 Papain family cysteine protease DUF1068 PF06364.12 ORF97100 - 0.79 9.6 3.4 0.3 10.9 0.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1068) Glyco_hydro_38N PF01074.22 ORF97008 - 5.2e-38 131.0 3.8 6.1e-38 130.8 3.8 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain HAD_2 PF13419.6 ORF96650 - 2.8e-20 73.1 0.0 3.4e-20 72.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF96650 - 2.2e-14 54.2 0.0 4.4e-14 53.3 0.0 1.4 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF96650 - 3.6e-07 30.2 0.0 6.1e-07 29.4 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 ORF96650 - 5e-05 23.8 0.0 0.00013 22.4 0.0 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 ORF96650 - 0.017 14.5 0.0 0.022 14.1 0.0 1.1 1 0 0 1 1 1 0 Putative Phosphatase ALG11_N PF15924.5 ORF96301 - 1.1e-26 94.3 0.0 1.3e-26 93.9 0.0 1.1 1 0 0 1 1 1 1 ALG11 mannosyltransferase N-terminus DCB PF16213.5 ORF96301 - 0.0082 15.8 0.3 0.011 15.5 0.3 1.1 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 CRAL_TRIO_2 PF13716.6 ORF96301 - 0.07 13.3 0.0 0.099 12.8 0.0 1.4 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain Peptidase_C97 PF05903.14 ORF95214 - 4.7e-19 68.7 0.0 6e-19 68.4 0.0 1.1 1 0 0 1 1 1 1 PPPDE putative peptidase domain LRAT PF04970.13 ORF95214 - 0.13 12.6 0.2 0.23 11.8 0.2 1.4 1 0 0 1 1 1 0 Lecithin retinol acyltransferase tRNA-synt_1b PF00579.25 ORF95190 - 3.5e-10 39.7 0.0 4.1e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Mito_carr PF00153.27 ORF94831 - 4.7e-24 84.1 0.1 7.1e-11 41.9 0.1 2.1 1 1 1 2 2 2 2 Mitochondrial carrier protein DUF3719 PF12516.8 ORF93006 - 0.13 12.0 0.1 0.31 10.8 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) FNIP_C PF14638.6 ORF92689 - 0.15 11.7 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Folliculin-interacting protein C-terminus PRK PF00485.18 ORF92114 - 0.029 14.1 0.5 0.041 13.6 0.5 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family PIN_8 PF18476.1 ORF89899 - 0.1 12.4 10.0 0.13 12.1 10.0 1.1 1 0 0 1 1 1 0 PIN like domain Tyrosinase PF00264.20 ORF89899 - 0.17 12.1 0.8 0.19 12.0 0.8 1.2 1 0 0 1 1 1 0 Common central domain of tyrosinase CEL_III_C PF18054.1 ORF89899 - 0.31 11.1 6.4 0.53 10.4 6.2 1.5 1 1 0 1 1 1 0 CEL-III C-terminal Suf PF05843.14 ORF89899 - 1 9.3 10.8 1.3 9.0 10.8 1.2 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) Neur_chan_memb PF02932.16 ORF89899 - 3.7 7.5 8.6 4.4 7.3 8.6 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Nrap_D2 PF17403.2 ORF89768 - 0.0034 17.2 0.0 0.0045 16.8 0.0 1.3 1 0 0 1 1 1 1 Nrap protein PAP/OAS-like domain EutK_C PF16365.5 ORF89082 - 4.2e-35 119.6 1.2 4.2e-35 119.6 1.2 2.1 2 0 0 2 2 2 1 Ethanolamine utilization protein EutK C-terminus BMC PF00936.19 ORF89082 - 4.3e-21 74.7 2.4 9.6e-21 73.6 1.6 1.8 2 0 0 2 2 2 1 BMC domain HTH_IclR PF09339.10 ORF89082 - 0.0033 17.2 0.2 0.0078 16.0 0.2 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 ORF89082 - 0.0066 16.5 0.1 0.017 15.2 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain EAP30 PF04157.16 ORF89082 - 0.0081 15.5 0.0 0.0081 15.5 0.0 1.2 1 0 0 1 1 1 1 EAP30/Vps36 family FaeA PF04703.12 ORF89082 - 0.0083 16.5 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 FaeA-like protein TrmB PF01978.19 ORF89082 - 0.0086 15.9 0.0 0.02 14.7 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB U1snRNP70_N PF12220.8 ORF86890 - 0.1 13.2 0.4 0.1 13.2 0.4 3.2 2 1 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal CH PF00307.31 ORF85230 - 0.0052 16.9 1.2 0.0077 16.4 1.2 1.3 1 0 0 1 1 1 1 Calponin homology (CH) domain ADIP PF11559.8 ORF84123 - 0.0021 18.2 4.1 0.0021 18.2 4.1 2.1 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding DMPK_coil PF08826.10 ORF84123 - 0.039 14.1 0.6 0.14 12.3 0.6 1.9 1 0 0 1 1 1 0 DMPK coiled coil domain like V_ATPase_I PF01496.19 ORF84123 - 0.23 9.3 5.6 0.28 9.0 5.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2854 PF11016.8 ORF84123 - 0.64 9.9 4.4 2.4 8.0 0.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2854) DivIC PF04977.15 ORF84123 - 5 7.0 11.3 0.76 9.6 0.8 3.3 2 1 1 3 3 3 0 Septum formation initiator PP2C PF00481.21 ORF83205 - 1.1e-43 149.7 0.0 1.4e-43 149.4 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF83205 - 0.0011 18.9 0.0 0.0016 18.4 0.0 1.4 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) PP2C_2 PF13672.6 ORF83205 - 0.024 14.3 0.0 0.048 13.3 0.0 1.5 1 1 0 1 1 1 0 Protein phosphatase 2C YjbF PF11102.8 ORF80191 - 2.6e-52 177.4 1.0 2.8e-52 177.2 1.0 1.0 1 0 0 1 1 1 1 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CRC_subunit PF08624.10 ORF80191 - 0.13 12.7 0.0 0.29 11.6 0.0 1.9 1 1 0 1 1 1 0 Chromatin remodelling complex Rsc7/Swp82 subunit Glyco_hydro_38N PF01074.22 ORF80046 - 5.2e-38 131.0 3.8 6.1e-38 130.8 3.8 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain ATP-synt_C PF00137.21 ORF78763 - 4.9e-33 113.3 32.0 6.5e-20 71.2 12.3 2.1 2 0 0 2 2 2 2 ATP synthase subunit C C2 PF00168.30 ORF76293 - 3.2e-14 53.1 0.1 6.9e-14 52.0 0.0 1.5 1 1 0 1 1 1 1 C2 domain TetR_C_31 PF17940.1 ORF74227 - 0.06 13.5 1.4 0.56 10.4 0.4 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PapD_N PF00345.20 ORF73954 - 0.1 12.5 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain GST_C PF00043.25 ORF73448 - 9.2e-13 48.2 0.1 1.5e-12 47.6 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF73448 - 5e-08 33.1 0.1 7.9e-08 32.4 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF73448 - 1.1e-05 25.4 0.0 2.3e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF73448 - 0.0076 16.6 0.0 0.058 13.8 0.0 2.2 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF73448 - 0.046 13.5 0.1 0.09 12.6 0.1 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain C2 PF00168.30 ORF67390 - 3.2e-14 53.1 0.1 6.9e-14 52.0 0.0 1.5 1 1 0 1 1 1 1 C2 domain DSPc PF00782.20 ORF66726 - 0.00029 20.6 0.4 0.00042 20.2 0.4 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain CDKN3 PF05706.12 ORF66726 - 0.0016 18.1 0.0 0.0024 17.5 0.0 1.3 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase PF00102.27 ORF66726 - 0.0049 16.5 0.0 0.0057 16.3 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase YjgF_endoribonc PF14588.6 ORF66047 - 1e-33 116.6 0.0 1.1e-33 116.4 0.0 1.0 1 0 0 1 1 1 1 YjgF/chorismate_mutase-like, putative endoribonuclease Ribonuc_L-PSP PF01042.21 ORF66047 - 5e-19 68.5 0.0 6.6e-19 68.1 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Pkinase PF00069.25 ORF63733 - 6.6e-29 101.1 0.0 7.7e-29 100.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63733 - 1.8e-17 63.5 0.0 2.2e-17 63.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF63733 - 0.0022 17.4 0.0 0.003 16.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF63733 - 0.095 12.0 0.0 0.16 11.3 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF3050 PF11251.8 ORF63733 - 0.17 11.5 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3050) DUF1712 PF08217.11 ORF63098 - 0.11 11.0 0.1 0.11 10.9 0.1 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1712) Ion_trans PF00520.31 ORF63049 - 0.0027 17.0 3.3 0.0038 16.5 3.3 1.1 1 0 0 1 1 1 1 Ion transport protein CRAL_TRIO PF00650.20 ORF62548 - 0.0073 16.0 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF62548 - 0.07 13.3 0.7 0.16 12.2 0.7 1.6 1 0 0 1 1 1 0 CRAL/TRIO, N-terminal domain Xrn1_D3 PF18194.1 ORF60411 - 0.059 13.5 0.7 0.12 12.5 0.1 1.7 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 EF-hand_1 PF00036.32 ORF59641 - 2.6e-16 57.8 2.5 2.7e-08 32.8 0.1 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF59641 - 7.2e-14 52.0 1.1 7.2e-14 52.0 1.1 2.0 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF59641 - 1e-11 43.7 4.5 1.5e-05 24.5 0.5 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF59641 - 1e-09 37.4 4.2 0.00045 19.6 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF59641 - 2.2e-08 33.8 2.7 4.7e-07 29.6 0.0 2.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF59641 - 0.00029 21.1 0.1 0.00073 19.8 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain Dockerin_1 PF00404.18 ORF59641 - 0.00031 20.9 0.0 0.00071 19.7 0.0 1.7 1 0 0 1 1 1 1 Dockerin type I domain DUF2666 PF10869.8 ORF59641 - 0.0079 16.4 2.3 0.011 15.9 2.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2666) DUF1840 PF08895.11 ORF59641 - 0.042 14.2 0.4 0.042 14.2 0.4 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF1840) SPARC_Ca_bdg PF10591.9 ORF59641 - 0.049 14.0 11.3 0.033 14.5 8.7 2.0 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region OAD_gamma PF04277.13 ORF59641 - 0.36 11.5 2.4 2.1 9.0 0.0 2.3 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain NAP PF00956.18 ORF5959 - 3e-27 95.5 2.7 3e-27 95.5 2.7 1.6 2 0 0 2 2 2 1 Nucleosome assembly protein (NAP) BUD22 PF09073.10 ORF5959 - 0.013 14.9 14.8 0.015 14.7 14.8 1.0 1 0 0 1 1 1 0 BUD22 ig PF00047.25 ORF5959 - 0.17 12.1 4.1 0.32 11.2 4.1 1.4 1 0 0 1 1 1 0 Immunoglobulin domain Phage_holin_3_6 PF07332.11 ORF58906 - 0.1 12.7 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III AP4E_app_platf PF14807.6 ORF58863 - 0.085 13.2 0.0 0.3 11.5 0.0 1.7 2 0 0 2 2 2 0 Adaptin AP4 complex epsilon appendage platform TMEM154 PF15102.6 ORF54054 - 0.0017 18.2 0.7 0.0036 17.2 0.7 1.6 1 1 0 1 1 1 1 TMEM154 protein family DUF5305 PF17231.2 ORF54054 - 0.0032 16.9 1.0 0.004 16.6 0.8 1.3 1 1 0 1 1 1 1 Family of unknown function (DUF5305) DUF4834 PF16118.5 ORF54054 - 0.0045 17.9 3.7 0.014 16.3 0.1 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4834) TMEM51 PF15345.6 ORF54054 - 0.011 15.6 0.2 0.014 15.3 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 LRR19-TM PF15176.6 ORF54054 - 0.019 14.9 0.4 0.06 13.3 0.0 1.8 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain Vpu PF00558.19 ORF54054 - 0.056 13.2 0.0 0.09 12.6 0.0 1.4 1 0 0 1 1 1 0 Vpu protein ISK_Channel PF02060.15 ORF54054 - 0.085 12.6 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Slow voltage-gated potassium channel MAP17 PF15807.5 ORF54054 - 0.21 11.8 1.1 0.31 11.3 0.4 1.7 1 1 1 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF4133 PF13571.6 ORF54054 - 0.3 11.4 1.8 0.41 11.0 0.9 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4133) Orf78 PF06024.12 ORF54054 - 0.5 10.7 0.1 0.5 10.7 0.1 2.0 1 1 1 2 2 2 0 Orf78 (ac78) Yip1 PF04893.17 ORF52696 - 3.4e-11 43.2 17.1 9.6e-11 41.7 17.1 1.7 1 1 0 1 1 1 1 Yip1 domain SMN PF06003.12 ORF51538 - 0.011 15.0 2.8 0.011 15.0 2.8 2.0 1 1 0 2 2 2 0 Survival motor neuron protein (SMN) Zip PF02535.22 ORF51538 - 0.99 8.6 2.1 1.5 8.0 2.1 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter Raftlin PF15250.6 ORF51538 - 3.5 6.3 8.1 4.1 6.1 8.1 1.2 1 0 0 1 1 1 0 Raftlin AF-4 PF05110.13 ORF51538 - 5.1 5.0 19.2 5.9 4.8 19.2 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein TMEM132D_C PF15706.5 ORF50882 - 9.4e-05 22.1 0.2 0.0002 21.0 0.1 1.5 1 1 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF5305 PF17231.2 ORF50882 - 0.00093 18.7 1.3 0.0014 18.1 0.5 1.6 1 1 0 1 1 1 1 Family of unknown function (DUF5305) DUF4500 PF14937.6 ORF50882 - 0.0026 17.7 0.0 0.0054 16.7 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4500) TMEM171 PF15471.6 ORF50882 - 0.006 15.6 0.0 0.0077 15.3 0.0 1.1 1 0 0 1 1 1 1 Transmembrane protein family 171 ABC2_membrane_3 PF12698.7 ORF50882 - 0.0066 15.6 0.4 0.0089 15.2 0.4 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein DUF4834 PF16118.5 ORF50882 - 0.0082 17.1 0.3 0.034 15.1 0.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4834) SKN1 PF03935.15 ORF50882 - 0.0098 14.3 0.0 0.013 14.0 0.0 1.1 1 0 0 1 1 1 1 Beta-glucan synthesis-associated protein (SKN1) FAM176 PF14851.6 ORF50882 - 0.014 15.1 0.5 0.014 15.1 0.5 1.7 1 1 1 2 2 2 0 FAM176 family TMEM144 PF07857.12 ORF50882 - 0.022 13.7 0.0 0.032 13.2 0.0 1.2 1 0 0 1 1 1 0 Transmembrane family, TMEM144 of transporters EphA2_TM PF14575.6 ORF50882 - 0.026 15.4 0.0 0.049 14.5 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain SID-1_RNA_chan PF13965.6 ORF50882 - 0.042 12.3 0.2 0.042 12.3 0.2 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 TarH PF02203.15 ORF50882 - 0.047 13.6 0.4 0.083 12.8 0.0 1.5 2 0 0 2 2 2 0 Tar ligand binding domain homologue MAP17 PF15807.5 ORF50882 - 0.066 13.4 0.5 0.096 12.9 0.3 1.4 1 1 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 LRR19-TM PF15176.6 ORF50882 - 0.068 13.2 0.6 0.15 12.1 0.1 1.7 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain Acatn PF13000.7 ORF50882 - 0.096 11.2 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 Acetyl-coenzyme A transporter 1 DUF4133 PF13571.6 ORF50882 - 0.17 12.3 2.0 0.25 11.7 0.7 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4133) RabGAP-TBC PF00566.18 ORF50519 - 5e-13 49.2 0.2 6.9e-13 48.7 0.2 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain UPF0016 PF01169.19 ORF49948 - 2.1e-12 47.2 4.5 2.1e-12 47.2 4.5 2.1 2 0 0 2 2 2 1 Uncharacterized protein family UPF0016 ActA PF05058.12 ORF4977 - 0.036 12.4 0.0 0.041 12.2 0.0 1.0 1 0 0 1 1 1 0 ActA Protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks129.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks129.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks129.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks129.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:48:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UQ_con PF00179.26 ORF24019 - 7.8e-06 25.6 0.0 1.7e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme ImpE PF07024.13 ORF24019 - 0.064 13.3 0.0 0.84 9.7 0.0 2.3 2 0 0 2 2 2 0 ImpE protein CENP-F_leu_zip PF10473.9 ORF24019 - 0.18 11.8 0.9 0.74 9.8 0.2 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 NINJA_B PF16136.5 ORF24019 - 2.1 8.7 4.3 16 5.9 0.1 2.8 3 0 0 3 3 3 0 Putative nuclear localisation signal DUF5582 PF17819.1 ORF106760 - 0.011 16.2 2.8 0.068 13.6 0.6 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5582) FAA_hydro_N_2 PF18288.1 ORF106760 - 0.83 10.1 4.4 2.9 8.4 0.0 3.9 4 0 0 4 4 4 0 Fumarylacetoacetase N-terminal domain 2 DivIC PF04977.15 ORF106760 - 8.4 6.3 9.4 4.4 7.2 1.6 3.5 3 0 0 3 3 3 0 Septum formation initiator PGI PF00342.19 ORF97561 - 5.1e-199 661.9 0.0 6.2e-199 661.6 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase SR-25 PF10500.9 ORF93839 - 0.0096 15.6 8.0 0.017 14.8 8.0 1.3 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein SOG2 PF10428.9 ORF93839 - 0.019 14.2 6.8 0.026 13.7 6.8 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein DHHW PF14286.6 ORF93839 - 0.43 9.9 0.6 0.74 9.1 0.6 1.3 1 0 0 1 1 1 0 DHHW protein DUF4692 PF15763.5 ORF93839 - 1.3 9.5 10.2 2.7 8.4 10.2 1.5 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) Herpes_pp85 PF04637.12 ORF93839 - 6.6 5.0 7.1 9.7 4.5 7.1 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Arm PF00514.23 ORF87345 - 0.0055 16.7 0.4 3.7 7.7 0.0 4.3 4 1 0 4 4 4 1 Armadillo/beta-catenin-like repeat WAPL PF07814.13 ORF87345 - 0.021 13.7 0.2 0.06 12.1 0.1 1.7 1 1 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin Arm_2 PF04826.13 ORF87345 - 0.049 13.1 0.9 4.9 6.5 0.2 3.2 1 1 2 3 3 3 0 Armadillo-like NADHdh-2_N PF12155.8 ORF87345 - 0.078 13.4 2.0 2.4 8.6 0.4 2.6 2 0 0 2 2 2 0 NADH dehydrogenase subunit 2 N-terminal AidB_N PF18158.1 ORF85869 - 4.7e-56 189.0 0.0 9.5e-56 188.0 0.0 1.5 1 0 0 1 1 1 1 Adaptive response protein AidB N-terminal domain Acyl-CoA_dh_1 PF00441.24 ORF85869 - 2.2e-31 109.1 1.1 7.2e-31 107.4 0.4 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF85869 - 5.2e-18 65.0 0.0 8.4e-18 64.4 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 ORF85869 - 1.8e-07 31.5 0.0 4.4e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain TPR_7 PF13176.6 ORF85869 - 0.75 10.0 2.7 34 4.8 0.1 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat REV1_C PF16727.5 ORF8222 - 0.022 15.1 6.3 1.4 9.3 0.3 2.8 2 0 0 2 2 2 0 DNA repair protein REV1 C-terminal domain Peptidase_S28 PF05577.12 ORF7303 - 2.3e-89 300.2 0.0 2.7e-89 299.9 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF7303 - 0.001 18.6 0.0 0.0019 17.7 0.0 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family VWA_2 PF13519.6 ORF62813 - 7.7e-15 55.5 0.1 2.2e-14 54.0 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF62813 - 7.3e-13 49.1 0.0 1.1e-12 48.5 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 ORF62813 - 5.9e-05 23.1 0.0 0.00011 22.2 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 ORF62813 - 0.0082 15.5 3.1 0.036 13.4 0.1 2.4 3 0 0 3 3 3 1 VWA domain containing CoxE-like protein vWA-TerF-like PF10138.9 ORF62813 - 0.031 14.4 0.0 0.049 13.7 0.0 1.3 1 0 0 1 1 1 0 vWA found in TerF C terminus PGM_PMM_I PF02878.16 ORF47743 - 3.2e-36 124.1 0.2 1e-35 122.5 0.1 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 ORF47743 - 3.9e-31 107.6 0.0 7.9e-31 106.6 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 ORF47743 - 8.1e-20 71.4 0.0 2.2e-19 70.0 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 ORF47743 - 1.4e-08 34.8 0.0 4.1e-08 33.3 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain SR-25 PF10500.9 ORF18001 - 0.0096 15.6 8.0 0.017 14.8 8.0 1.3 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein SOG2 PF10428.9 ORF18001 - 0.019 14.2 6.8 0.026 13.7 6.8 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein DHHW PF14286.6 ORF18001 - 0.43 9.9 0.6 0.74 9.1 0.6 1.3 1 0 0 1 1 1 0 DHHW protein DUF4692 PF15763.5 ORF18001 - 1.3 9.5 10.2 2.7 8.4 10.2 1.5 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) Herpes_pp85 PF04637.12 ORF18001 - 6.6 5.0 7.1 9.7 4.5 7.1 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) ATP-synt_ab PF00006.25 ORF86540 - 1.1e-71 240.9 0.0 1.7e-71 240.3 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 ORF86540 - 9.1e-47 158.5 3.4 1.5e-46 157.8 3.4 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 ORF86540 - 4.1e-14 52.8 2.4 9.1e-14 51.7 2.4 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 ORF86540 - 0.00025 21.1 0.5 0.00054 20.1 0.5 1.5 1 0 0 1 1 1 1 HAS barrel domain CSD2 PF17876.1 ORF86540 - 0.0018 18.4 0.8 0.015 15.5 0.2 2.2 2 0 0 2 2 2 1 Cold shock domain DUF4142 PF13628.6 ORF86540 - 0.19 12.0 3.2 0.46 10.7 3.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4142) VWA_3 PF13768.6 ORF84096 - 2.1e-10 40.8 0.0 3.6e-10 40.0 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 ORF79518 - 2.1e-10 40.8 0.0 3.6e-10 40.0 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF3342 PF11822.8 ORF18382 - 0.017 15.3 0.0 0.038 14.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) Cons_hypoth95 PF03602.15 NODE_6073_length_1632_cov_3.018159_g4397_i0reverse_frame_1 - 0.085 12.5 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 MAD PF05557.13 ORF87026 - 1.7e-13 49.9 59.1 9.8e-12 44.0 0.0 4.9 2 2 2 4 4 4 2 Mitotic checkpoint protein WD40_alt PF14077.6 ORF87026 - 0.03 14.2 3.3 1.7 8.6 0.0 4.2 4 0 0 4 4 4 0 Alternative WD40 repeat motif BLOC1_2 PF10046.9 ORF87026 - 0.12 12.7 37.9 0.039 14.3 3.0 5.7 4 2 1 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 ORF87026 - 2.9 7.9 32.9 1.9 8.5 0.1 6.3 3 2 3 7 7 7 0 Protein of unknown function (DUF1664) ZYG-11_interact PF05884.12 ORF87026 - 6.4 6.1 6.4 0.79 9.1 1.3 2.1 2 0 0 2 2 2 0 Interactor of ZYG-11 FA_desaturase PF00487.24 ORF79733 - 1.4e-32 113.6 19.5 1.4e-32 113.6 19.5 1.8 1 1 1 2 2 2 1 Fatty acid desaturase Cyt-b5 PF00173.28 ORF79733 - 2.8e-22 78.6 0.0 5.6e-22 77.7 0.0 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain BSD PF03909.17 ORF79733 - 0.0087 16.1 0.0 0.02 14.9 0.0 1.5 1 0 0 1 1 1 1 BSD domain Na_Ca_ex PF01699.24 ORF75353 - 1.2e-32 112.9 23.2 1.3e-19 70.6 8.6 2.2 2 0 0 2 2 2 2 Sodium/calcium exchanger protein NADH_4Fe-4S PF10589.9 ORF75353 - 0.047 13.8 0.0 15 5.8 0.0 2.8 3 0 0 3 3 3 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Adenylate_cycl PF01295.18 ORF68732 - 1.6e-209 697.5 0.0 1.8e-209 697.3 0.0 1.0 1 0 0 1 1 1 1 Adenylate cyclase, class-I Adenyl_cycl_N PF12633.7 ORF68732 - 0.052 13.4 0.0 0.095 12.6 0.0 1.3 1 0 0 1 1 1 0 Adenylate cyclase NT domain C2 PF00168.30 ORF62515 - 4.7e-17 62.2 0.0 9e-17 61.2 0.0 1.4 1 0 0 1 1 1 1 C2 domain PHA_synth_III_E PF09712.10 ORF62515 - 0.083 12.0 0.2 0.12 11.4 0.2 1.2 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) ScdA_N PF04405.14 ORF54215 - 0.00012 21.6 0.0 1.3 8.8 0.0 4.2 3 1 1 4 4 4 2 Domain of Unknown function (DUF542) Clp_N PF02861.20 ORF54215 - 0.068 13.3 0.1 8.7 6.6 0.0 3.7 3 1 1 4 4 4 0 Clp amino terminal domain, pathogenicity island component NAD_binding_11 PF14833.6 ORF54215 - 0.12 12.6 4.6 0.64 10.3 1.2 3.5 2 1 1 3 3 3 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EI24 PF07264.11 ORF54215 - 2.4 8.4 6.7 1.2 9.3 3.4 1.9 1 1 1 2 2 2 0 Etoposide-induced protein 2.4 (EI24) Glyco_hydro_38N PF01074.22 ORF34502 - 9e-58 195.9 4.4 1.7e-57 195.0 4.4 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF34502 - 4.2e-06 26.8 0.1 1.4e-05 25.1 0.1 1.9 1 0 0 1 1 1 1 Alpha mannosidase middle domain Nucleotid_trans PF03407.16 ORF111443 - 2.6e-06 27.6 0.0 0.00049 20.1 0.0 2.4 1 1 0 1 1 1 1 Nucleotide-diphospho-sugar transferase Choline_transpo PF04515.12 ORF109125 - 2.7e-54 184.6 24.0 2.7e-54 184.6 24.0 2.0 2 0 0 2 2 2 1 Plasma-membrane choline transporter YlaH PF14036.6 ORF109125 - 0.079 13.3 2.1 0.26 11.6 2.1 1.9 1 0 0 1 1 1 0 YlaH-like protein Peptidase_M14 PF00246.24 ORF108656 - 5.1e-46 157.8 0.2 8e-46 157.1 0.2 1.3 1 0 0 1 1 1 1 Zinc carboxypeptidase HET PF06985.11 ORF102555 - 0.019 15.3 0.2 0.055 13.8 0.0 1.7 1 1 1 2 2 2 0 Heterokaryon incompatibility protein (HET) TIR_2 PF13676.6 ORF102555 - 0.025 15.2 0.1 0.4 11.3 0.0 2.6 3 0 0 3 3 3 0 TIR domain DNA_topoisoIV PF00521.20 ORF84769 - 2.6e-124 415.4 0.1 3.4e-124 415.0 0.1 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A COX6A PF02046.15 ORF84769 - 0.035 14.6 0.1 0.082 13.4 0.1 1.5 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa PAPS_reduct PF01507.19 ORF84769 - 0.036 14.1 0.2 0.092 12.8 0.2 1.7 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family TTL PF03133.15 ORF73429 - 2e-17 63.3 0.0 1.2e-09 37.8 0.0 2.4 1 1 1 2 2 2 2 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF73429 - 0.0023 17.2 0.0 0.0042 16.4 0.0 1.4 1 0 0 1 1 1 1 YheC/D like ATP-grasp zf-CCHC_4 PF14392.6 ORF73429 - 0.76 9.6 2.6 3.3 7.5 2.0 2.1 2 0 0 2 2 2 0 Zinc knuckle PH PF00169.29 ORF50127 - 1.7e-10 41.4 1.0 1.7e-10 41.4 1.0 3.0 3 0 0 3 3 3 1 PH domain PH_2 PF08458.10 ORF50127 - 0.0006 20.1 0.1 0.002 18.5 0.1 1.9 1 0 0 1 1 1 1 Plant pleckstrin homology-like region PH_8 PF15409.6 ORF50127 - 0.0095 16.2 1.0 0.039 14.2 1.0 2.1 1 1 0 1 1 1 1 Pleckstrin homology domain DUF5525 PF17663.1 ORF50127 - 0.21 9.7 1.3 0.29 9.2 1.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5525) Mcp5_PH PF12814.7 ORF50127 - 1.2 9.2 8.0 0.3 11.2 1.2 2.9 2 1 0 2 2 2 0 Meiotic cell cortex C-terminal pleckstrin homology Pkinase PF00069.25 ORF38219 - 6.3e-27 94.6 0.0 6.3e-27 94.6 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF38219 - 1.3e-11 44.2 0.0 2.1e-11 43.6 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF38219 - 5.6e-06 26.5 0.0 0.0013 18.8 0.1 2.5 2 0 0 2 2 2 2 Phosphotransferase enzyme family DUF1196 PF06709.11 ORF38219 - 0.38 10.9 0.0 0.38 10.9 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1196) GBP PF02263.19 ORF35839 - 6.1e-22 78.1 0.9 1.4e-21 77.0 0.0 1.9 2 0 0 2 2 2 1 Guanylate-binding protein, N-terminal domain HalX PF08663.10 ORF35839 - 0.0036 17.6 3.6 0.0036 17.6 3.6 4.0 3 1 0 3 3 3 1 HalX domain NPV_P10 PF05531.12 ORF35839 - 0.16 12.5 0.5 32 5.1 0.1 3.0 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein GAT PF03127.14 ORF35839 - 1.5 9.2 9.7 1.6 9.1 1.5 3.6 2 1 1 3 3 3 0 GAT domain LPP PF04728.13 ORF35839 - 2.7 8.5 7.3 8.3 6.9 0.1 3.2 3 0 0 3 3 3 0 Lipoprotein leucine-zipper DUF3573 PF12097.8 ORF35839 - 2.8 6.7 8.9 2.7 6.7 1.6 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3573) Fib_alpha PF08702.10 ORF35839 - 3.1 8.0 7.7 15 5.8 7.9 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Pkinase PF00069.25 ORF18926 - 6.3e-27 94.6 0.0 6.3e-27 94.6 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18926 - 1.3e-11 44.2 0.0 2.1e-11 43.6 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF18926 - 5.6e-06 26.5 0.0 0.0013 18.8 0.1 2.5 2 0 0 2 2 2 2 Phosphotransferase enzyme family DUF1196 PF06709.11 ORF18926 - 0.38 10.9 0.0 0.38 10.9 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1196) DNA_topoisoIV PF00521.20 ORF16267 - 2.6e-124 415.4 0.1 3.4e-124 415.0 0.1 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A COX6A PF02046.15 ORF16267 - 0.035 14.6 0.1 0.082 13.4 0.1 1.5 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa PAPS_reduct PF01507.19 ORF16267 - 0.036 14.1 0.2 0.092 12.8 0.2 1.7 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Ion_trans PF00520.31 ORF76001 - 5.3e-07 29.1 7.8 1e-06 28.2 7.5 1.6 1 1 0 1 1 1 1 Ion transport protein SIKE PF05769.11 ORF39174 - 0.0032 17.4 1.9 0.012 15.6 0.0 2.2 2 0 0 2 2 2 1 SIKE family PspA_IM30 PF04012.12 ORF39174 - 0.0053 16.4 7.9 0.0053 16.4 7.9 2.2 2 0 0 2 2 2 1 PspA/IM30 family TolA_bind_tri PF16331.5 ORF39174 - 0.013 15.5 3.2 0.013 15.5 3.2 2.9 3 0 0 3 3 3 0 TolA binding protein trimerisation Spc7 PF08317.11 ORF39174 - 0.14 11.1 11.6 1.5 7.6 0.2 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF4201 PF13870.6 ORF39174 - 0.34 10.6 10.9 0.92 9.2 0.2 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4201) K-box PF01486.17 ORF39174 - 0.4 10.9 8.7 0.17 12.1 0.3 2.6 2 0 0 2 2 2 0 K-box region GAS PF13851.6 ORF39174 - 0.77 9.1 12.3 4.5 6.6 5.3 2.4 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding FlaC_arch PF05377.11 ORF39174 - 0.94 9.9 2.9 38 4.8 0.2 3.0 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Phage_GP20 PF06810.11 ORF39174 - 1 9.1 8.9 0.15 11.8 0.7 2.9 2 1 1 3 3 3 0 Phage minor structural protein GP20 Fez1 PF06818.15 ORF39174 - 1.7 9.0 9.1 0.77 10.2 1.9 2.4 2 1 0 2 2 2 0 Fez1 HIP1_clath_bdg PF16515.5 ORF39174 - 4.7 7.9 16.0 0.12 13.0 7.1 2.5 3 0 0 3 3 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4349 PF14257.6 ORF39174 - 7.8 5.9 10.6 0.82 9.1 5.7 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) Seryl_tRNA_N PF02403.22 ORF39174 - 8.8 6.6 9.6 29 4.9 0.1 2.5 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Cnn_1N PF07989.11 ORF39174 - 8.9 6.6 10.8 1.6 8.9 1.3 3.1 2 1 0 3 3 3 0 Centrosomin N-terminal motif 1 Csm1_N PF18504.1 ORF39174 - 9.2 6.7 12.7 1.2 9.6 2.0 2.9 3 0 0 3 3 3 0 Csm1 N-terminal domain HOOK PF05622.12 ORF3713 - 0.00016 20.0 36.5 0.00025 19.3 36.5 1.3 1 0 0 1 1 1 1 HOOK protein PHD PF00628.29 ORF3713 - 0.0043 16.9 4.1 0.014 15.3 4.1 1.9 1 0 0 1 1 1 1 PHD-finger zf-B_box PF00643.24 ORF3713 - 0.005 17.0 7.9 0.005 17.0 7.9 3.0 3 0 0 3 3 3 1 B-box zinc finger PHD_2 PF13831.6 ORF3713 - 0.034 13.7 1.6 0.076 12.6 1.6 1.6 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 ORF3713 - 0.87 9.6 4.9 2.1 8.4 4.9 1.6 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF4407 PF14362.6 ORF3713 - 2.1 7.6 19.8 3.5 6.9 19.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Fez1 PF06818.15 ORF3713 - 5.3 7.4 40.0 0.38 11.2 26.5 3.0 2 1 1 3 3 3 0 Fez1 DEAD PF00270.29 ORF21199 - 5.1e-33 114.3 0.0 1.6e-32 112.7 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF21199 - 3.9e-24 85.1 0.3 9.7e-24 83.9 0.1 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Apolipoprotein PF01442.18 ORF17962 - 5.8e-05 23.1 34.3 0.00031 20.7 11.7 3.9 1 1 1 2 2 2 1 Apolipoprotein A1/A4/E domain Cauli_DNA-bind PF03310.13 ORF17962 - 0.017 15.2 6.8 0.017 15.2 6.8 4.1 1 1 2 3 3 3 0 Caulimovirus DNA-binding protein Baculo_PEP_C PF04513.12 ORF17962 - 0.019 15.0 23.3 0.3 11.1 2.0 4.6 3 1 2 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4736 PF15883.5 ORF17962 - 0.65 9.7 3.4 2.8 7.6 2.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4736) YtxH PF12732.7 ORF17962 - 1.3 9.6 54.1 8.1 7.1 13.7 5.7 2 2 2 4 4 4 0 YtxH-like protein ApoO PF09769.9 ORF17962 - 1.6 8.7 13.8 0.42 10.6 0.6 3.4 3 2 0 3 3 3 0 Apolipoprotein O DUF883 PF05957.13 ORF17962 - 2.4 8.8 26.3 16 6.2 3.3 5.0 2 2 3 5 5 5 0 Bacterial protein of unknown function (DUF883) Taxilin PF09728.9 ORF17962 - 3.6 6.7 63.7 0.13 11.5 51.7 2.1 1 1 1 2 2 2 0 Myosin-like coiled-coil protein TipAS PF07739.13 ORF17962 - 5.6 7.5 26.7 4.3 7.9 3.8 4.0 2 2 1 3 3 3 0 TipAS antibiotic-recognition domain Sulfatase PF00884.23 ORF108155 - 4.7e-35 121.5 0.1 6.2e-35 121.1 0.1 1.2 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF108155 - 0.0039 16.8 0.0 0.0087 15.7 0.0 1.5 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase GCS2 PF04107.13 ORF108155 - 0.03 13.7 0.0 0.075 12.4 0.0 1.6 2 0 0 2 2 2 0 Glutamate-cysteine ligase family 2(GCS2) DUF4976 PF16347.5 ORF108155 - 0.16 12.2 1.4 0.19 12.0 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4976) PPR_2 PF13041.6 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 4.8e-30 103.5 0.0 2.7e-08 33.9 0.0 7.6 4 1 2 7 7 7 6 PPR repeat family PPR PF01535.20 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 2.8e-26 89.9 6.0 6.5e-05 22.9 0.0 11.5 12 0 0 12 12 12 5 PPR repeat PPR_3 PF13812.6 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 1.2e-24 86.1 0.0 4.5e-08 33.0 0.0 6.6 5 2 1 7 7 7 5 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 2.9e-13 49.3 0.0 0.73 9.6 0.0 8.5 10 0 0 10 10 10 3 PPR repeat PPR_long PF17177.4 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 2.4e-06 27.1 6.4 0.28 10.5 1.5 5.8 3 1 2 5 5 5 2 Pentacotripeptide-repeat region of PRORP Clathrin PF00637.20 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 0.0049 16.7 0.0 1 9.2 0.0 3.7 3 0 0 3 3 3 1 Region in Clathrin and VPS Thyroglobulin_1 PF00086.18 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 0.016 14.8 0.2 3.5 7.4 0.1 3.5 2 1 1 3 3 3 0 Thyroglobulin type-1 repeat TPR_12 PF13424.6 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 0.33 11.3 14.1 44 4.5 0.0 6.5 5 3 1 6 6 6 0 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 0.73 9.8 4.7 1.1 9.2 0.0 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_6198_length_1621_cov_150.803909_g4495_i0forward_frame_1 - 2.1 9.0 8.1 12 6.6 0.0 4.8 4 1 1 5 5 5 0 Tetratricopeptide repeat TPH PF13868.6 ORF9389 - 1.6e-05 23.6 133.7 1.6e-05 23.6 133.7 2.4 2 1 1 3 3 3 2 Trichohyalin-plectin-homology domain EF-hand_7 PF13499.6 ORF70680 - 3e-09 37.2 3.9 0.031 14.7 0.3 5.0 4 2 0 5 5 5 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF70680 - 1.3e-08 34.1 0.6 0.0079 16.0 0.0 5.2 5 0 0 5 5 5 2 EF-hand domain EF-hand_1 PF00036.32 ORF70680 - 2e-08 33.2 0.9 0.016 14.7 0.0 5.0 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF70680 - 0.0019 18.0 0.6 3.7 7.5 0.1 4.2 4 0 0 4 4 4 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF70680 - 0.017 15.4 0.0 0.66 10.3 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 ORF70680 - 0.022 14.2 1.8 0.16 11.5 0.0 3.0 3 0 0 3 3 3 0 EF hand Bacillus_HBL PF05791.11 ORF67127 - 6.8e-05 22.8 0.2 0.00013 21.8 0.2 1.5 1 0 0 1 1 1 1 Bacillus haemolytic enterotoxin (HBL) Fib_alpha PF08702.10 ORF67127 - 0.0032 17.7 11.0 0.018 15.3 1.4 3.2 1 1 2 3 3 3 2 Fibrinogen alpha/beta chain family FTCD_C PF04961.12 ORF67127 - 0.013 15.3 0.8 0.013 15.3 0.8 2.4 3 0 0 3 3 3 0 Formiminotransferase-cyclodeaminase HrpB2 PF09487.10 ORF67127 - 0.52 10.8 7.1 0.17 12.3 0.5 2.9 3 0 0 3 3 3 0 Bacterial type III secretion protein (HrpB2) ORF6C PF10552.9 ORF67127 - 1.1 9.4 5.0 0.57 10.3 0.3 2.7 3 0 0 3 3 3 0 ORF6C domain NPV_P10 PF05531.12 ORF67127 - 1.1 9.7 2.8 1e+02 3.4 0.0 3.6 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein BRE1 PF08647.11 ORF67127 - 9.1 6.4 27.1 0.054 13.6 3.5 3.7 2 1 0 3 3 3 0 BRE1 E3 ubiquitin ligase MKT1_C PF12246.8 ORF61489 - 1.3e-44 152.2 0.0 1.9e-44 151.7 0.0 1.2 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication MKT1_N PF12247.8 ORF61489 - 3.4e-21 75.4 0.1 6.7e-21 74.5 0.1 1.5 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication DUF4140 PF13600.6 ORF55512 - 0.03 14.8 0.1 5.2 7.6 0.1 2.4 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF2934 PF11154.8 ORF55512 - 1.5 8.5 5.2 8.8 6.1 5.2 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2934) Dynein_C PF18199.1 ORF54263 - 0.0068 15.7 0.3 0.0068 15.7 0.3 1.7 2 0 0 2 2 2 1 Dynein heavy chain C-terminal domain PilJ PF13675.6 ORF54263 - 0.11 12.5 8.1 0.23 11.5 0.8 3.6 2 2 0 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term DUF948 PF06103.11 ORF54263 - 0.24 11.7 6.2 0.38 11.0 0.2 3.3 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF3337 PF11816.8 ORF54263 - 0.45 10.4 6.2 0.05 13.5 1.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3337) AlkA_N PF06029.11 ORF54263 - 8 6.8 8.4 7.6 6.8 0.3 3.5 3 0 0 3 3 3 0 AlkA N-terminal domain Dynein_C PF18199.1 ORF47441 - 0.0068 15.7 0.3 0.0068 15.7 0.3 1.7 2 0 0 2 2 2 1 Dynein heavy chain C-terminal domain PilJ PF13675.6 ORF47441 - 0.11 12.5 8.1 0.23 11.5 0.8 3.6 2 2 0 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term DUF948 PF06103.11 ORF47441 - 0.24 11.7 6.2 0.38 11.0 0.2 3.3 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF3337 PF11816.8 ORF47441 - 0.45 10.4 6.2 0.05 13.5 1.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3337) AlkA_N PF06029.11 ORF47441 - 8 6.8 8.4 7.6 6.8 0.3 3.5 3 0 0 3 3 3 0 AlkA N-terminal domain MKT1_C PF12246.8 ORF37584 - 1.3e-44 152.2 0.0 1.9e-44 151.7 0.0 1.2 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication MKT1_N PF12247.8 ORF37584 - 3.4e-21 75.4 0.1 6.7e-21 74.5 0.1 1.5 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication Peptidase_M3 PF01432.20 ORF27096 - 2.5e-135 452.3 0.0 2.9e-135 452.1 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 AAA_30 PF13604.6 ORF21041 - 1.3e-16 60.9 0.0 2.5e-16 59.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF21041 - 2.9e-07 30.9 0.3 0.00034 21.0 0.3 2.7 2 1 1 3 3 3 1 AAA domain Viral_helicase1 PF01443.18 ORF21041 - 9.9e-07 28.7 0.0 0.0022 17.8 0.0 2.3 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.6 ORF21041 - 8e-05 23.1 0.2 0.00025 21.5 0.2 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 ORF21041 - 0.00013 21.9 0.1 0.11 12.3 0.1 2.3 1 1 0 2 2 2 2 AAA domain KTI12 PF08433.10 ORF21041 - 0.00032 20.2 0.0 0.00052 19.5 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 PIF1 PF05970.14 ORF21041 - 0.00032 20.0 0.0 0.0062 15.7 0.0 2.2 2 0 0 2 2 2 1 PIF1-like helicase AAA_33 PF13671.6 ORF21041 - 0.00039 20.6 1.5 0.017 15.3 0.0 2.7 3 0 0 3 3 2 1 AAA domain AAA PF00004.29 ORF21041 - 0.00054 20.4 0.0 0.0032 17.9 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 ORF21041 - 0.00063 19.2 0.0 0.001 18.5 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 ORF21041 - 0.00096 19.2 0.0 0.0072 16.3 0.0 2.5 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF21041 - 0.0016 18.7 0.1 0.0058 16.9 0.1 1.9 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 ORF21041 - 0.0031 17.4 0.1 0.0057 16.6 0.1 1.4 1 0 0 1 1 1 1 NTPase AAA_18 PF13238.6 ORF21041 - 0.0038 17.8 0.2 0.015 15.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF21041 - 0.0052 16.5 0.1 0.0097 15.7 0.1 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein Zeta_toxin PF06414.12 ORF21041 - 0.0073 15.6 0.0 0.014 14.7 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin TsaE PF02367.17 ORF21041 - 0.01 15.8 0.0 0.071 13.1 0.0 2.1 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MobB PF03205.14 ORF21041 - 0.012 15.5 0.1 0.023 14.6 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NACHT PF05729.12 ORF21041 - 0.012 15.5 0.0 0.031 14.2 0.0 1.7 1 0 0 1 1 1 0 NACHT domain DUF2075 PF09848.9 ORF21041 - 0.03 13.6 0.0 0.052 12.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MeaB PF03308.16 ORF21041 - 0.046 12.7 0.1 0.084 11.8 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB GvpD PF07088.11 ORF21041 - 0.055 12.1 0.0 0.083 11.5 0.0 1.1 1 0 0 1 1 1 0 GvpD gas vesicle protein TrwB_AAD_bind PF10412.9 ORF21041 - 0.06 12.3 0.1 0.14 11.0 0.1 1.5 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_17 PF13207.6 ORF21041 - 0.14 12.6 0.1 0.98 9.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain TIP49 PF06068.13 ORF21041 - 0.16 11.2 0.1 0.24 10.6 0.1 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_24 PF13479.6 ORF21041 - 0.2 11.4 0.0 0.47 10.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF21041 - 0.22 10.9 0.1 0.48 9.7 0.0 1.6 2 0 0 2 2 1 0 KaiC EF-hand_7 PF13499.6 ORF18158 - 3e-09 37.2 3.9 0.031 14.7 0.3 5.0 4 2 0 5 5 5 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF18158 - 1.3e-08 34.1 0.6 0.0079 16.0 0.0 5.2 5 0 0 5 5 5 2 EF-hand domain EF-hand_1 PF00036.32 ORF18158 - 2e-08 33.2 0.9 0.016 14.7 0.0 5.0 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF18158 - 0.0019 18.0 0.6 3.7 7.5 0.1 4.2 4 0 0 4 4 4 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF18158 - 0.017 15.4 0.0 0.66 10.3 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 ORF18158 - 0.022 14.2 1.8 0.16 11.5 0.0 3.0 3 0 0 3 3 3 0 EF hand EF-hand_7 PF13499.6 ORF15013 - 3e-09 37.2 3.9 0.031 14.7 0.3 5.0 4 2 0 5 5 5 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF15013 - 1.3e-08 34.1 0.6 0.0079 16.0 0.0 5.2 5 0 0 5 5 5 2 EF-hand domain EF-hand_1 PF00036.32 ORF15013 - 2e-08 33.2 0.9 0.016 14.7 0.0 5.0 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF15013 - 0.0019 18.0 0.6 3.7 7.5 0.1 4.2 4 0 0 4 4 4 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF15013 - 0.017 15.4 0.0 0.66 10.3 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 ORF15013 - 0.022 14.2 1.8 0.16 11.5 0.0 3.0 3 0 0 3 3 3 0 EF hand Thioredoxin_6 PF13848.6 ORF110887 - 4.9e-08 33.1 11.2 1.1e-05 25.5 0.4 4.5 2 2 1 4 4 4 3 Thioredoxin-like domain Thioredoxin PF00085.20 ORF110887 - 0.002 18.1 1.0 0.11 12.5 0.0 3.7 5 0 0 5 5 5 1 Thioredoxin MKT1_C PF12246.8 ORF107707 - 1.3e-44 152.2 0.0 1.9e-44 151.7 0.0 1.2 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication MKT1_N PF12247.8 ORF107707 - 3.4e-21 75.4 0.1 6.7e-21 74.5 0.1 1.5 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication SSF PF00474.17 ORF87519 - 6.4e-13 48.3 24.0 6.4e-13 48.3 24.0 2.0 2 1 0 2 2 2 1 Sodium:solute symporter family Ion_trans PF00520.31 ORF73439 - 8.4e-29 100.5 10.6 1.2e-28 100.0 10.6 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF73439 - 6.3e-06 26.6 1.1 0.0043 17.5 0.2 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF73439 - 0.00016 21.0 0.0 0.0029 17.0 0.0 2.9 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF73439 - 0.00024 20.8 0.0 0.067 13.2 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain Focal_AT PF03623.13 ORF73439 - 0.00043 20.3 0.1 0.0018 18.3 0.1 2.0 2 0 0 2 2 2 1 Focal adhesion targeting region EF-hand_8 PF13833.6 ORF73439 - 0.0035 17.1 0.1 0.0094 15.8 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair RPW8 PF05659.11 ORF73439 - 0.046 13.4 0.3 0.15 11.7 0.0 1.9 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 ERM PF00769.19 ORF73439 - 0.049 13.5 0.1 0.049 13.5 0.1 1.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Nif11 PF07862.11 ORF73439 - 0.12 12.7 0.2 0.47 10.8 0.0 2.1 2 0 0 2 2 2 0 Nif11 domain eIF3_N PF09440.10 ORF73439 - 0.2 12.1 1.6 0.24 11.8 0.1 1.9 2 0 0 2 2 2 0 eIF3 subunit 6 N terminal domain SNARE_assoc PF09335.11 ORF64566 - 3.1e-05 24.4 0.4 3.1e-05 24.4 0.4 4.4 5 0 0 5 5 5 2 SNARE associated Golgi protein FUN14 PF04930.15 ORF64566 - 1.2 9.6 9.8 11 6.5 1.6 4.2 3 2 0 3 3 3 0 FUN14 family PUL PF08324.11 ORF54108 - 4.4e-37 127.8 0.0 6.4e-37 127.3 0.0 1.2 1 0 0 1 1 1 1 PUL domain PFU PF09070.11 ORF54108 - 3.2e-29 101.5 0.1 5.6e-29 100.7 0.1 1.3 1 0 0 1 1 1 1 PFU (PLAA family ubiquitin binding) WD40 PF00400.32 ORF54108 - 3.3e-08 34.1 2.7 4.7e-05 24.1 0.2 3.0 2 0 0 2 2 2 2 WD domain, G-beta repeat UBA PF00627.31 ORF45968 - 0.008 16.1 0.0 0.017 15.0 0.0 1.6 1 0 0 1 1 1 1 UBA/TS-N domain Rad60-SLD PF11976.8 ORF45968 - 0.011 15.6 1.3 0.03 14.1 0.1 2.4 2 0 0 2 2 2 0 Ubiquitin-2 like Rad60 SUMO-like Ion_trans PF00520.31 ORF43396 - 8.4e-29 100.5 10.6 1.2e-28 100.0 10.6 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF43396 - 6.3e-06 26.6 1.1 0.0043 17.5 0.2 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF43396 - 0.00016 21.0 0.0 0.0029 17.0 0.0 2.9 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF43396 - 0.00024 20.8 0.0 0.067 13.2 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain Focal_AT PF03623.13 ORF43396 - 0.00043 20.3 0.1 0.0018 18.3 0.1 2.0 2 0 0 2 2 2 1 Focal adhesion targeting region EF-hand_8 PF13833.6 ORF43396 - 0.0035 17.1 0.1 0.0094 15.8 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair RPW8 PF05659.11 ORF43396 - 0.046 13.4 0.3 0.15 11.7 0.0 1.9 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 ERM PF00769.19 ORF43396 - 0.049 13.5 0.1 0.049 13.5 0.1 1.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Nif11 PF07862.11 ORF43396 - 0.12 12.7 0.2 0.47 10.8 0.0 2.1 2 0 0 2 2 2 0 Nif11 domain eIF3_N PF09440.10 ORF43396 - 0.2 12.1 1.6 0.24 11.8 0.1 1.9 2 0 0 2 2 2 0 eIF3 subunit 6 N terminal domain SSF PF00474.17 ORF28957 - 6.4e-13 48.3 24.0 6.4e-13 48.3 24.0 2.0 2 1 0 2 2 2 1 Sodium:solute symporter family RSN1_7TM PF02714.15 ORF15330 - 4.5e-33 114.7 20.5 8.4e-18 64.6 10.8 2.1 2 0 0 2 2 2 2 Calcium-dependent channel, 7TM region, putative phosphate PHM7_cyt PF14703.6 ORF15330 - 0.17 12.1 0.0 0.4 10.9 0.0 1.6 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter OHA PF14418.6 NODE_6246_length_1617_cov_86.898230_g4537_i0forward_frame_1 - 0.052 13.4 0.5 0.17 11.7 0.5 1.9 1 0 0 1 1 1 0 OST-HTH Associated domain Cauli_DNA-bind PF03310.13 NODE_6246_length_1617_cov_86.898230_g4537_i0forward_frame_1 - 0.14 12.3 1.6 0.34 11.0 1.6 1.6 1 0 0 1 1 1 0 Caulimovirus DNA-binding protein Acetyltransf_1 PF00583.25 NODE_6230_length_1618_cov_78.193936_g4525_i0forward_frame_2 - 4.1e-06 27.0 0.0 8.3e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 NODE_6230_length_1618_cov_78.193936_g4525_i0forward_frame_2 - 0.00013 22.3 0.0 0.00031 21.1 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_6230_length_1618_cov_78.193936_g4525_i0forward_frame_2 - 0.00056 19.8 0.1 0.0015 18.5 0.1 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.6 NODE_6230_length_1618_cov_78.193936_g4525_i0forward_frame_2 - 0.059 13.1 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain fn3 PF00041.21 ORF4121 - 1.9e-28 98.6 23.8 4.7e-10 39.7 3.9 5.8 6 1 0 6 6 6 5 Fibronectin type III domain fn3_4 PF16794.5 ORF4121 - 5.3e-06 26.3 0.3 5.1 7.1 0.0 5.2 5 1 0 5 5 5 3 Fibronectin-III type domain Pur_ac_phosph_N PF16656.5 ORF4121 - 0.01 16.4 28.0 0.029 14.9 5.3 5.4 5 1 0 5 5 5 0 Purple acid Phosphatase, N-terminal domain CcmH PF03918.14 ORF2802 - 0.34 10.2 1.4 11 5.3 0.1 2.8 2 1 1 3 3 3 0 Cytochrome C biogenesis protein HhH-GPD PF00730.25 ORF24155 - 2.3e-10 40.9 0.0 5.8e-10 39.6 0.0 1.7 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein fn3 PF00041.21 ORF100749 - 1.9e-28 98.6 23.8 4.7e-10 39.7 3.9 5.8 6 1 0 6 6 6 5 Fibronectin type III domain fn3_4 PF16794.5 ORF100749 - 5.3e-06 26.3 0.3 5.1 7.1 0.0 5.2 5 1 0 5 5 5 3 Fibronectin-III type domain Pur_ac_phosph_N PF16656.5 ORF100749 - 0.01 16.4 28.0 0.029 14.9 5.3 5.4 5 1 0 5 5 5 0 Purple acid Phosphatase, N-terminal domain Ephrin_rec_like PF07699.13 NODE_6246_length_1617_cov_86.898230_g4537_i0forward_frame_3 - 6.4e-06 25.8 19.2 4e-05 23.3 5.4 12.6 6 5 5 11 11 11 9 Putative ephrin-receptor like Nop53 PF07767.11 ORF6394 - 0.0013 18.2 10.8 0.0013 18.2 10.8 2.4 2 1 0 2 2 2 1 Nop53 (60S ribosomal biogenesis) DUF3659 PF12396.8 ORF6394 - 0.0015 18.4 21.7 0.54 10.2 4.0 4.6 2 2 0 2 2 2 2 Protein of unknown function (DUF3659) FliC PF12445.8 ORF6394 - 0.0065 16.8 1.0 0.2 12.0 0.1 2.4 2 0 0 2 2 2 1 Flagellin protein GlnE PF03710.15 ORF52516 - 6.5e-103 343.5 0.6 6.5e-103 343.5 0.6 1.9 2 0 0 2 2 2 1 Glutamate-ammonia ligase adenylyltransferase GlnD_UR_UTase PF08335.11 ORF52516 - 7.7e-14 52.0 4.9 2e-12 47.4 1.0 2.9 3 0 0 3 3 3 2 GlnD PII-uridylyltransferase HALZ PF02183.18 ORF52516 - 0.043 14.0 0.0 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 Homeobox associated leucine zipper RF3_C PF16658.5 ORF44822 - 4.1e-47 159.3 0.1 7.4e-47 158.4 0.1 1.5 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain GTP_EFTU PF00009.27 ORF44822 - 1.7e-46 158.2 0.0 2.6e-46 157.6 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF44822 - 1.2e-11 44.8 0.1 4.1e-11 43.1 0.1 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF44822 - 0.00012 22.1 0.0 0.00025 21.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 ORF44822 - 0.00021 21.3 0.0 0.0004 20.4 0.0 1.4 1 0 0 1 1 1 1 Elongation Factor G, domain II Ras PF00071.22 ORF44822 - 0.045 13.3 0.0 0.09 12.4 0.0 1.4 1 0 0 1 1 1 0 Ras family Roc PF08477.13 ORF44822 - 0.15 12.3 0.0 0.48 10.6 0.0 1.9 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase DUF3659 PF12396.8 ORF43266 - 0.0017 18.3 21.7 0.54 10.2 4.0 4.5 2 2 0 2 2 2 2 Protein of unknown function (DUF3659) FliC PF12445.8 ORF43266 - 0.0065 16.8 1.0 0.2 12.0 0.1 2.4 2 0 0 2 2 2 1 Flagellin protein KH_dom-like PF14714.6 ORF31465 - 3.8e-23 81.6 0.1 2.2e-22 79.2 0.0 2.2 2 0 0 2 2 2 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MMR_HSR1 PF01926.23 ORF31465 - 3.3e-16 59.4 0.0 5.9e-16 58.6 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF31465 - 1.3e-08 34.5 0.0 7.3e-08 32.1 0.0 2.2 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF31465 - 1.3e-05 24.9 0.0 0.0061 16.1 0.0 3.5 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF31465 - 0.0012 18.8 0.0 0.52 10.2 0.0 2.6 3 0 0 3 3 3 2 RsgA GTPase Dynamin_N PF00350.23 ORF31465 - 0.0014 18.7 0.0 0.01 15.9 0.0 2.1 1 1 1 2 2 2 1 Dynamin family AIG1 PF04548.16 ORF31465 - 0.0044 16.4 0.0 0.01 15.2 0.0 1.5 1 1 0 1 1 1 1 AIG1 family Ras PF00071.22 ORF31465 - 0.0098 15.5 0.0 0.41 10.2 0.0 3.1 3 1 0 3 3 3 1 Ras family Roc PF08477.13 ORF31465 - 0.014 15.6 0.0 0.049 13.8 0.0 2.0 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase IIGP PF05049.13 ORF31465 - 0.11 11.6 0.0 0.2 10.6 0.0 1.4 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) ABC_tran PF00005.27 ORF31465 - 0.13 12.8 0.0 0.27 11.7 0.0 1.5 1 0 0 1 1 1 0 ABC transporter Nsp3_PL2pro PF12124.8 ORF31465 - 0.19 11.6 0.0 0.34 10.7 0.0 1.4 1 0 0 1 1 1 0 Coronavirus polyprotein cleavage domain Nop53 PF07767.11 ORF2571 - 0.0013 18.2 10.8 0.0013 18.2 10.8 2.4 2 1 0 2 2 2 1 Nop53 (60S ribosomal biogenesis) DUF3659 PF12396.8 ORF2571 - 0.0015 18.4 21.7 0.54 10.2 4.0 4.6 2 2 0 2 2 2 2 Protein of unknown function (DUF3659) FliC PF12445.8 ORF2571 - 0.0065 16.8 1.0 0.2 12.0 0.1 2.4 2 0 0 2 2 2 1 Flagellin protein Glyco_transf_15 PF01793.16 ORF1997 - 5.7e-08 32.4 0.0 7.3e-07 28.7 0.0 2.0 1 1 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase Nop53 PF07767.11 ORF108033 - 0.0013 18.2 10.8 0.0013 18.2 10.8 2.4 2 1 0 2 2 2 1 Nop53 (60S ribosomal biogenesis) DUF3659 PF12396.8 ORF108033 - 0.0015 18.4 21.7 0.54 10.2 4.0 4.6 2 2 0 2 2 2 2 Protein of unknown function (DUF3659) FliC PF12445.8 ORF108033 - 0.0065 16.8 1.0 0.2 12.0 0.1 2.4 2 0 0 2 2 2 1 Flagellin protein TPR_2 PF07719.17 ORF105312 - 1.6e-16 59.0 0.5 0.00026 20.9 0.2 5.4 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF105312 - 7.1e-14 50.9 0.1 0.00012 21.8 0.2 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF105312 - 7.6e-13 47.6 0.1 0.00081 19.4 0.2 3.8 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF105312 - 2e-08 34.6 6.0 0.0019 18.6 0.1 5.1 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF105312 - 2.7e-08 33.9 16.1 0.056 14.3 0.0 7.3 5 2 3 8 8 8 3 Tetratricopeptide repeat TPR_11 PF13414.6 ORF105312 - 8.3e-08 31.8 0.0 0.00012 21.7 0.0 3.2 2 1 2 4 4 4 2 TPR repeat TPR_12 PF13424.6 ORF105312 - 3.3e-06 27.3 2.9 0.031 14.6 0.5 3.8 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF105312 - 0.00014 22.4 9.2 0.011 16.4 0.0 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF105312 - 0.00047 19.9 1.7 1.1 9.2 0.6 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF105312 - 0.0041 17.2 2.5 0.033 14.3 0.9 2.9 3 1 1 4 4 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF105312 - 0.011 15.9 0.0 0.15 12.3 0.0 2.5 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 HeLo PF14479.6 ORF105312 - 0.013 15.3 0.3 0.079 12.8 0.0 2.2 2 0 0 2 2 2 0 Prion-inhibition and propagation TPR_17 PF13431.6 ORF105312 - 0.037 14.4 1.2 4 8.0 0.0 3.6 3 0 0 3 3 3 0 Tetratricopeptide repeat Rubis-subs-bind PF09273.11 ORF105312 - 0.052 14.3 0.3 0.36 11.5 0.0 2.4 2 0 0 2 2 2 0 Rubisco LSMT substrate-binding TPR_3 PF07720.12 ORF105312 - 0.079 13.0 0.0 0.62 10.1 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF105312 - 0.12 12.5 1.3 68 3.8 0.1 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF105312 - 7.6 7.5 6.8 2 9.3 0.7 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_MLP1_2 PF07926.12 ORF77502 - 0.013 15.6 8.7 0.013 15.6 8.7 5.8 4 2 1 5 5 5 0 TPR/MLP1/MLP2-like protein SlyX PF04102.12 ORF77502 - 0.03 14.9 1.7 0.03 14.9 1.7 5.3 4 2 1 5 5 5 0 SlyX Hemerythrin PF01814.23 ORF77502 - 1.8 9.2 8.9 1.1 9.9 3.9 2.8 2 1 0 2 2 2 0 Hemerythrin HHE cation binding domain DUF4250 PF14056.6 ORF77502 - 7.5 6.6 7.8 1.5 8.8 0.5 3.5 4 0 0 4 4 4 0 Domain of unknown function (DUF4250) Ammonium_transp PF00909.21 ORF58633 - 8.2e-101 337.6 31.1 1e-100 337.3 31.1 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family Dynactin_p62 PF05502.13 ORF53800 - 1.3e-07 30.8 11.1 7.9e-07 28.2 3.6 2.3 2 0 0 2 2 2 2 Dynactin p62 family MqsA_antitoxin PF15731.5 ORF53800 - 0.22 11.6 0.7 0.4 10.8 0.7 1.4 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA tRNA-synt_2b PF00587.25 ORF50695 - 6.6e-30 104.4 0.0 8e-28 97.6 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 ORF50695 - 3.2e-11 43.2 0.1 2.1e-10 40.6 0.1 2.2 2 0 0 2 2 2 1 Anticodon binding domain TIR PF01582.20 ORF12619 - 0.0021 17.9 0.0 0.0033 17.2 0.0 1.2 1 0 0 1 1 1 1 TIR domain TIR_2 PF13676.6 ORF12619 - 0.027 15.1 0.0 0.058 14.0 0.0 1.5 1 0 0 1 1 1 0 TIR domain AAA PF00004.29 ORF101601 - 7.8e-56 188.1 1.2 1.4e-46 158.2 0.0 2.7 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.18 ORF101601 - 1e-22 80.1 2.7 3.6e-22 78.4 0.7 2.7 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_lid_3 PF17862.1 ORF101601 - 1e-15 57.2 1.6 2.4e-15 56.0 1.6 1.6 1 0 0 1 1 1 1 AAA+ lid domain RuvB_N PF05496.12 ORF101601 - 1.3e-11 44.5 0.0 5.8e-06 26.1 0.0 2.9 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain CDC48_2 PF02933.17 ORF101601 - 2.9e-10 39.8 0.1 9.6e-10 38.1 0.0 1.9 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.6 ORF101601 - 6.4e-10 39.7 0.0 0.00017 22.0 0.0 3.2 2 1 0 2 2 2 2 AAA ATPase domain AAA_5 PF07728.14 ORF101601 - 1.2e-09 38.3 0.2 7.6e-05 22.7 0.0 3.7 2 1 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF101601 - 6.7e-09 36.1 0.0 3.6e-06 27.2 0.0 2.5 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 ORF101601 - 6.9e-09 36.0 0.0 2.9e-05 24.3 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 ORF101601 - 1e-07 32.3 0.1 0.028 14.7 0.0 3.5 2 1 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 ORF101601 - 9e-07 28.5 0.5 0.043 13.2 0.0 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF101601 - 1.3e-06 27.8 0.4 0.00095 18.5 0.0 2.9 3 0 0 3 3 3 1 TIP49 P-loop domain RNA_helicase PF00910.22 ORF101601 - 1.9e-06 28.2 0.0 0.098 13.1 0.0 3.4 4 0 0 4 4 2 2 RNA helicase AAA_18 PF13238.6 ORF101601 - 6.6e-06 26.7 0.0 0.015 15.9 0.0 2.8 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF101601 - 1.3e-05 25.0 0.0 0.088 12.5 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein ATPase_2 PF01637.18 ORF101601 - 2e-05 24.6 0.0 0.25 11.2 0.0 3.1 2 1 0 2 2 2 2 ATPase domain predominantly from Archaea AAA_7 PF12775.7 ORF101601 - 2.6e-05 23.8 0.1 0.3 10.6 0.0 2.8 2 1 0 2 2 2 2 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF101601 - 0.00011 22.0 0.0 0.073 12.8 0.0 2.9 2 1 0 2 2 2 1 Sigma-54 interaction domain AAA_24 PF13479.6 ORF101601 - 0.00011 22.0 0.1 0.13 12.0 0.0 2.7 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 ORF101601 - 0.00012 22.5 0.9 0.086 13.3 0.0 3.2 3 0 0 3 3 2 1 AAA domain AAA_25 PF13481.6 ORF101601 - 0.00016 21.3 0.1 3.7 7.1 0.0 3.4 2 1 1 3 3 3 1 AAA domain AAA_14 PF13173.6 ORF101601 - 0.00019 21.5 0.0 0.0064 16.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain Parvo_NS1 PF01057.17 ORF101601 - 0.0002 20.6 0.0 0.51 9.4 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 ATPase PF06745.13 ORF101601 - 0.00022 20.7 0.1 1.1 8.6 0.0 3.2 3 0 0 3 3 3 2 KaiC ABC_tran PF00005.27 ORF101601 - 0.00032 21.2 0.0 1.4 9.4 0.0 2.8 2 0 0 2 2 2 2 ABC transporter TsaE PF02367.17 ORF101601 - 0.00064 19.7 0.0 0.64 10.0 0.0 2.7 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE NB-ARC PF00931.22 ORF101601 - 0.00071 18.8 0.1 0.9 8.7 0.0 2.6 3 0 0 3 3 2 2 NB-ARC domain ResIII PF04851.15 ORF101601 - 0.00075 19.5 0.0 0.1 12.6 0.0 2.5 3 0 0 3 3 2 1 Type III restriction enzyme, res subunit NTPase_1 PF03266.15 ORF101601 - 0.00097 19.1 3.1 3.5 7.5 0.0 5.1 5 0 0 5 5 5 1 NTPase AAA_28 PF13521.6 ORF101601 - 0.0012 19.2 0.0 0.98 9.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 ORF101601 - 0.0015 18.5 0.1 1.7 8.5 0.0 2.9 3 0 0 3 3 3 1 NACHT domain UFD1 PF03152.14 ORF101601 - 0.0016 17.9 0.0 0.011 15.2 0.0 2.0 1 1 1 2 2 2 1 Ubiquitin fusion degradation protein UFD1 Bac_DnaA PF00308.18 ORF101601 - 0.0018 18.1 0.0 0.13 12.0 0.0 2.4 2 0 0 2 2 2 1 Bacterial dnaA protein DUF815 PF05673.13 ORF101601 - 0.0019 17.4 0.0 0.6 9.2 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF815) Sigma54_activ_2 PF14532.6 ORF101601 - 0.0022 18.1 0.0 0.28 11.3 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain PhoH PF02562.16 ORF101601 - 0.0029 17.1 0.3 2.7 7.4 0.1 2.5 2 0 0 2 2 2 2 PhoH-like protein Zeta_toxin PF06414.12 ORF101601 - 0.0043 16.4 0.2 0.41 9.9 0.0 2.9 3 0 0 3 3 3 1 Zeta toxin AAA_29 PF13555.6 ORF101601 - 0.016 14.9 0.0 4.2 7.2 0.0 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_19 PF13245.6 ORF101601 - 0.018 15.4 2.0 4.4 7.6 0.1 3.5 3 1 1 4 4 4 0 AAA domain Rad17 PF03215.15 ORF101601 - 0.021 14.8 0.0 4.4 7.2 0.0 2.7 2 1 0 2 2 2 0 Rad17 P-loop domain AAA_3 PF07726.11 ORF101601 - 0.025 14.4 0.0 3.2 7.6 0.0 2.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 ORF101601 - 0.027 14.2 0.2 4 7.1 0.1 2.6 2 0 0 2 2 2 0 AAA domain AAA_11 PF13086.6 ORF101601 - 0.03 14.1 0.1 6.8 6.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.9 ORF101601 - 0.048 12.9 0.1 0.6 9.3 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Zot PF05707.12 ORF101601 - 0.058 13.0 0.0 2.1 7.9 0.0 2.8 2 1 1 3 3 3 0 Zonular occludens toxin (Zot) KAP_NTPase PF07693.14 ORF101601 - 0.087 12.0 0.1 1.7 7.8 0.0 2.5 2 1 1 3 3 3 0 KAP family P-loop domain AFG1_ATPase PF03969.16 ORF101601 - 0.087 11.7 1.0 8.9 5.1 0.0 2.9 3 0 0 3 3 3 0 AFG1-like ATPase TniB PF05621.11 ORF101601 - 0.16 11.4 0.0 7.8 5.9 0.0 3.1 4 0 0 4 4 4 0 Bacterial TniB protein TBD PF12845.7 NODE_6332_length_1609_cov_166.082592_g4609_i0reverse_frame_3 - 0.018 15.0 1.7 0.018 15.0 1.7 3.8 4 0 0 4 4 4 0 TBD domain Ribosomal_L5 PF00281.19 NODE_6332_length_1609_cov_166.082592_g4609_i0reverse_frame_3 - 0.11 12.8 2.4 1.7 9.0 0.0 3.9 3 0 0 3 3 3 0 Ribosomal protein L5 BPD_transp_1 PF00528.22 ORF72727 - 2.4e-16 60.0 21.6 3.4e-11 43.2 9.7 3.5 2 2 1 3 3 3 2 Binding-protein-dependent transport system inner membrane component DUF2275 PF10039.9 ORF72727 - 1.2 9.2 3.6 12 5.9 0.4 2.7 3 0 0 3 3 3 0 Predicted integral membrane protein (DUF2275) Atthog PF18800.1 ORF72727 - 1.9 8.4 7.3 0.22 11.4 0.5 2.7 2 1 1 3 3 3 0 Attenuator of Hedgehog OSTbeta PF15048.6 ORF72727 - 2.5 8.3 4.0 2.7 8.1 0.0 2.8 2 1 1 3 3 3 0 Organic solute transporter subunit beta protein HSP70 PF00012.20 ORF57849 - 2.2e-206 686.7 1.5 2.4e-206 686.5 1.5 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF57849 - 1.8e-16 59.9 0.1 2.7e-16 59.3 0.1 1.2 1 0 0 1 1 1 1 MreB/Mbl protein FGGY_C PF02782.16 ORF57849 - 0.0027 17.5 0.0 0.01 15.6 0.0 1.9 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain Spore_GerAC PF05504.11 ORF57849 - 0.016 15.4 1.4 0.24 11.6 0.0 2.7 3 0 0 3 3 3 0 Spore germination B3/ GerAC like, C-terminal DDR PF08841.10 ORF57849 - 0.025 13.6 0.2 0.2 10.6 0.1 2.2 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain DUF641 PF04859.12 ORF49170 - 0.19 12.0 0.2 0.19 12.0 0.2 3.1 4 0 0 4 4 4 0 Plant protein of unknown function (DUF641) TMPIT PF07851.13 ORF49170 - 0.42 9.8 1.3 0.73 9.0 1.3 1.3 1 0 0 1 1 1 0 TMPIT-like protein BRE1 PF08647.11 ORF49170 - 0.76 9.9 7.1 0.33 11.1 2.3 2.6 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase Exonuc_VII_L PF02601.15 ORF49170 - 9 5.8 11.5 0.14 11.7 2.9 2.1 3 0 0 3 3 3 0 Exonuclease VII, large subunit GPS2_interact PF15784.5 ORF49170 - 9.2 6.8 6.8 3.2 8.3 0.2 2.9 3 0 0 3 3 3 0 G-protein pathway suppressor 2-interacting domain Nucleotid_trans PF03407.16 ORF45103 - 0.068 13.1 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 Nucleotide-diphospho-sugar transferase IlvN PF07991.12 ORF40583 - 2.5e-58 196.3 0.1 4e-58 195.6 0.1 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 ORF40583 - 1.8e-52 177.4 0.2 1.5e-28 99.9 0.0 2.3 2 0 0 2 2 2 2 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 ORF40583 - 0.0007 19.0 0.0 0.0013 18.2 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 ORF40583 - 0.0058 17.0 0.0 0.018 15.5 0.0 1.8 1 0 0 1 1 1 1 Putative NAD(P)-binding ApbA PF02558.16 ORF40583 - 0.011 15.4 0.0 0.019 14.6 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA AdoHcyase_NAD PF00670.21 ORF40583 - 0.034 14.2 0.0 0.074 13.1 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain START PF01852.19 ORF112396 - 1.4e-15 57.3 0.0 5.2e-15 55.4 0.0 1.8 2 0 0 2 2 2 1 START domain DUF4795 PF16043.5 ORF104728 - 5.4e-08 32.7 64.3 7.5e-05 22.4 13.5 5.4 1 1 3 4 4 4 3 Domain of unknown function (DUF4795) Baculo_PEP_C PF04513.12 ORF104728 - 4.6e-05 23.5 40.9 0.072 13.1 3.2 6.2 2 1 4 6 6 6 4 Baculovirus polyhedron envelope protein, PEP, C terminus DUF948 PF06103.11 ORF104728 - 3.5 7.9 28.0 4.1 7.7 0.5 6.8 5 1 1 6 6 6 0 Bacterial protein of unknown function (DUF948) Mrx7 PF10906.8 ORF104728 - 9.7 6.5 9.6 0.2 11.9 0.5 3.0 4 0 0 4 4 4 0 MIOREX complex component 7 Bac_rhamnosid6H PF17389.2 NODE_6403_length_1604_cov_4.480561_g4666_i0forward_frame_1 - 1e-07 31.6 1.2 6.9e-05 22.3 0.1 2.4 2 0 0 2 2 2 2 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Trehalase PF01204.18 NODE_6403_length_1604_cov_4.480561_g4666_i0forward_frame_1 - 1.4e-07 30.8 0.3 4.1e-07 29.2 0.3 1.7 1 1 0 1 1 1 1 Trehalase Glyco_hydro_63 PF03200.16 NODE_6403_length_1604_cov_4.480561_g4666_i0forward_frame_1 - 3.7e-06 26.0 0.1 0.00024 20.0 0.0 2.9 3 0 0 3 3 3 1 Glycosyl hydrolase family 63 C-terminal domain p450 PF00067.22 ORF96554 - 2e-55 188.4 0.3 2.5e-55 188.1 0.3 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF4296 PF14129.6 ORF96554 - 0.064 13.9 0.1 0.52 11.0 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4296) Exog_C PF18026.1 ORF96554 - 0.073 13.1 0.1 0.51 10.4 0.0 2.4 2 0 0 2 2 2 0 Endo/exonuclease (EXOG) C-terminal domain UBA_e1_thiolCys PF10585.9 ORF93786 - 7.8e-82 275.0 2.0 1.1e-81 274.5 2.0 1.2 1 0 0 1 1 1 1 Ubiquitin-activating enzyme active site ThiF PF00899.21 ORF93786 - 6.5e-34 117.4 0.0 8.6e-34 117.0 0.0 1.1 1 0 0 1 1 1 1 ThiF family E1_UFD PF09358.10 ORF93786 - 2.2e-14 53.9 0.0 6e-14 52.5 0.0 1.8 1 0 0 1 1 1 1 Ubiquitin fold domain MecA_N PF05223.11 ORF93786 - 0.039 14.2 0.4 0.12 12.6 0.4 1.9 1 0 0 1 1 1 0 NTF2-like N-terminal transpeptidase domain DnaJ PF00226.31 ORF90583 - 1.2e-16 60.6 0.8 5.6e-16 58.4 0.8 2.2 1 0 0 1 1 1 1 DnaJ domain p450 PF00067.22 ORF77997 - 9.3e-50 169.7 0.1 1.3e-49 169.2 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Biotin_lipoyl_2 PF13533.6 ORF77997 - 0.1 12.4 0.0 5.5 6.9 0.0 2.4 2 0 0 2 2 2 0 Biotin-lipoyl like p450 PF00067.22 ORF75764 - 3.8e-49 167.7 0.1 4.7e-49 167.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Tho2 PF11262.8 ORF74723 - 5.9e-73 245.7 4.9 5.9e-73 245.7 4.9 1.8 2 0 0 2 2 2 1 Transcription factor/nuclear export subunit protein 2 Sec23_helical PF04815.15 ORF74723 - 0.11 12.3 0.0 0.53 10.1 0.0 2.3 2 1 0 2 2 2 0 Sec23/Sec24 helical domain p450 PF00067.22 ORF63214 - 3.8e-49 167.7 0.1 4.7e-49 167.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 PARP PF00644.20 ORF58294 - 2.8e-17 63.0 0.0 6.7e-16 58.5 0.0 2.2 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain p450 PF00067.22 ORF48502 - 9.3e-50 169.7 0.1 1.3e-49 169.2 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Biotin_lipoyl_2 PF13533.6 ORF48502 - 0.1 12.4 0.0 5.5 6.9 0.0 2.4 2 0 0 2 2 2 0 Biotin-lipoyl like Apolipoprotein PF01442.18 ORF26339 - 6.8e-05 22.8 34.6 0.00032 20.6 11.8 3.9 1 1 1 2 2 2 1 Apolipoprotein A1/A4/E domain Cauli_DNA-bind PF03310.13 ORF26339 - 0.015 15.4 6.6 0.015 15.4 6.6 4.1 1 1 2 3 3 3 0 Caulimovirus DNA-binding protein Baculo_PEP_C PF04513.12 ORF26339 - 0.019 15.0 23.4 0.29 11.2 2.0 4.6 3 1 2 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4736 PF15883.5 ORF26339 - 0.63 9.7 3.4 2.7 7.7 2.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4736) YtxH PF12732.7 ORF26339 - 1.1 9.8 54.1 7.8 7.1 13.7 5.8 2 2 2 4 4 4 0 YtxH-like protein ApoO PF09769.9 ORF26339 - 1.6 8.7 13.8 0.41 10.6 0.6 3.4 3 2 0 3 3 3 0 Apolipoprotein O DUF883 PF05957.13 ORF26339 - 1.9 9.1 26.1 15 6.3 3.2 5.0 2 2 3 5 5 5 0 Bacterial protein of unknown function (DUF883) Taxilin PF09728.9 ORF26339 - 3.3 6.8 63.7 0.11 11.6 51.6 2.1 1 1 1 2 2 2 0 Myosin-like coiled-coil protein TipAS PF07739.13 ORF26339 - 6.3 7.4 27.0 3.9 8.0 3.7 4.0 2 2 2 4 4 4 0 TipAS antibiotic-recognition domain SBP_bac_5 PF00496.22 ORF104102 - 1.5e-79 267.7 4.5 2.7e-79 266.9 4.5 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle TPH PF13868.6 NODE_6433_length_1601_cov_709.259259_g3774_i3forward_frame_1 - 4e-68 229.5 145.3 4e-68 229.5 145.3 2.1 2 0 0 2 2 2 1 Trichohyalin-plectin-homology domain RITA PF17066.5 NODE_6433_length_1601_cov_709.259259_g3774_i3forward_frame_1 - 0.016 14.9 0.1 0.016 14.9 0.1 2.1 2 0 0 2 2 2 0 RBPJ-interacting and tubulin associated protein C2 PF00168.30 ORF61530 - 2.8e-05 24.3 0.0 0.00077 19.7 0.0 2.3 2 0 0 2 2 2 1 C2 domain Ferlin_C PF16165.5 ORF61530 - 0.0014 18.6 0.0 0.0026 17.7 0.0 1.4 1 0 0 1 1 1 1 Ferlin C-terminus zf-C3HC4_3 PF13920.6 ORF32507 - 1.6 8.6 13.6 3.2 7.7 13.6 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) C1_1 PF00130.22 ORF32507 - 4.9 7.1 12.8 1.3 9.0 7.8 2.4 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2610 PF11020.8 NODE_6433_length_1601_cov_709.259259_g3774_i3forward_frame_2 - 0.091 12.6 0.6 0.76 9.7 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF2610) Lipoxygenase PF00305.19 ORF92421 - 0.00019 20.0 0.0 0.00019 20.0 0.0 1.8 2 0 0 2 2 2 1 Lipoxygenase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks12.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks12.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks12.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks12.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:49:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NARP1 PF12569.8 ORF47503 - 2.4 7.0 7.2 3.2 6.6 7.2 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 MORN PF02493.20 ORF46995 - 4.9e-42 139.4 53.6 9.6e-08 31.5 1.4 8.0 8 0 0 8 8 8 7 MORN repeat ARS2 PF04959.13 ORF45997 - 2.6 8.4 6.8 0.39 11.1 1.0 1.9 1 1 1 2 2 2 0 Arsenite-resistance protein 2 CH PF00307.31 ORF44525 - 0.0052 16.9 1.2 0.0077 16.4 1.2 1.3 1 0 0 1 1 1 1 Calponin homology (CH) domain Pkinase PF00069.25 ORF44481 - 2.7e-14 53.2 0.0 3.4e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44481 - 0.00051 19.4 0.0 0.00062 19.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Toxin-JAB1 PF15659.6 ORF444 - 0.099 13.0 0.4 0.47 10.8 0.1 2.0 2 0 0 2 2 2 0 JAB-like toxin 1 Glyco_hydro_38N PF01074.22 ORF43575 - 5.2e-38 131.0 3.8 6.1e-38 130.8 3.8 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Mrr_N PF14338.6 ORF42712 - 0.025 14.7 0.3 0.048 13.8 0.3 1.5 1 0 0 1 1 1 0 Mrr N-terminal domain ALIX_LYPXL_bnd PF13949.6 ORF42712 - 0.057 12.7 3.9 0.073 12.4 3.9 1.1 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV Aminotran_3 PF00202.21 ORF42604 - 4.3e-40 137.6 0.0 4.7e-40 137.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III ACAS_N PF16177.5 ORF4259 - 0.13 12.2 0.3 0.25 11.3 0.3 1.4 1 0 0 1 1 1 0 Acetyl-coenzyme A synthetase N-terminus Actin PF00022.19 ORF42226 - 4.6e-39 134.2 0.0 5.1e-39 134.0 0.0 1.0 1 0 0 1 1 1 1 Actin Pro_isomerase PF00160.21 ORF41681 - 8.6e-37 126.8 0.0 1e-36 126.6 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Herpes_pp85 PF04637.12 ORF41620 - 1.7 6.9 6.5 2.9 6.2 6.5 1.3 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) UPF0016 PF01169.19 ORF4133 - 2.1e-12 47.2 4.5 2.1e-12 47.2 4.5 2.1 2 0 0 2 2 2 1 Uncharacterized protein family UPF0016 Ank_2 PF12796.7 ORF41016 - 1.5e-05 25.5 0.1 3.6e-05 24.2 0.1 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF41016 - 0.00077 19.8 0.6 0.15 12.6 0.3 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF41016 - 0.0022 18.5 0.1 0.0095 16.5 0.1 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF41016 - 0.0048 17.3 0.1 0.27 11.9 0.0 2.6 2 0 0 2 2 2 1 Ankyrin repeat SPOR PF05036.13 ORF40077 - 1.9e-11 44.2 0.0 2.6e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 Sporulation related domain FAP PF07174.11 ORF40077 - 2.1 7.7 20.1 2.3 7.6 20.1 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DP PF08781.10 ORF38696 - 0.031 14.2 0.1 0.049 13.5 0.1 1.4 1 0 0 1 1 1 0 Transcription factor DP Phage_NinH PF06322.11 ORF38696 - 0.063 13.2 0.2 0.14 12.0 0.2 1.6 1 0 0 1 1 1 0 Phage NinH protein Ras PF00071.22 ORF38187 - 4.1e-34 117.5 1.2 6e-34 117.0 1.2 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF38187 - 3.7e-15 56.2 0.4 3.7e-15 56.2 0.4 1.8 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF38187 - 3.3e-05 23.4 0.4 4.1e-05 23.1 0.4 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family PARG_cat PF05028.14 ORF36583 - 0.016 14.5 0.6 0.021 14.1 0.6 1.1 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) LBR_tudor PF09465.10 ORF35608 - 0.13 12.1 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 Lamin-B receptor of TUDOR domain Peptidase_C1 PF00112.23 ORF34115 - 6.5e-22 78.7 0.7 8e-22 78.4 0.7 1.1 1 0 0 1 1 1 1 Papain family cysteine protease AAA_31 PF13614.6 ORF33833 - 0.98 9.3 3.7 1.2 9.0 3.2 1.4 1 1 0 1 1 1 0 AAA domain ParBc PF02195.18 ORF33798 - 0.012 15.9 0.0 0.019 15.3 0.0 1.4 1 0 0 1 1 1 0 ParB-like nuclease domain TAFH PF07531.14 ORF33798 - 0.19 11.8 0.0 0.43 10.7 0.0 1.5 1 0 0 1 1 1 0 NHR1 homology to TAF DUF2894 PF11445.8 ORF33793 - 0.042 14.3 4.7 0.055 13.9 4.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) zf-RING_2 PF13639.6 ORF33212 - 5e-09 36.3 9.2 8.8e-09 35.6 9.2 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF33212 - 1.5e-06 27.8 12.8 2.8e-06 27.0 12.8 1.5 1 0 0 1 1 1 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF33212 - 9.8e-06 25.1 6.5 1.5e-05 24.5 6.5 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 ORF33212 - 5.7e-05 23.3 10.7 0.00033 20.9 10.8 2.1 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF33212 - 7.7e-05 22.5 7.7 0.00014 21.6 7.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF33212 - 0.00039 20.2 9.1 0.00077 19.3 9.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF33212 - 0.00041 20.3 8.8 0.00075 19.5 8.8 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-Nse PF11789.8 ORF33212 - 0.0014 18.4 2.2 0.003 17.3 2.2 1.6 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-ANAPC11 PF12861.7 ORF33212 - 0.0048 16.9 5.2 0.012 15.7 5.0 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF33212 - 0.0049 16.8 4.4 0.0093 15.9 4.4 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 COMPASS-Shg1 PF05205.12 ORF33212 - 0.018 15.8 0.3 0.05 14.3 0.0 1.8 2 0 0 2 2 2 0 COMPASS (Complex proteins associated with Set1p) component shg1 zf-RING_5 PF14634.6 ORF33212 - 0.019 14.9 7.4 0.032 14.2 7.4 1.4 1 0 0 1 1 1 0 zinc-RING finger domain Not3 PF04065.15 ORF33212 - 0.021 14.2 2.3 0.028 13.9 2.3 1.1 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component FANCL_C PF11793.8 ORF33212 - 0.051 13.8 6.0 0.1 12.8 6.0 1.5 1 0 0 1 1 1 0 FANCL C-terminal domain Rtf2 PF04641.12 ORF33212 - 0.057 12.8 2.4 0.038 13.3 0.7 1.6 1 1 1 2 2 2 0 Rtf2 RING-finger zf-C3H2C3 PF17122.5 ORF33212 - 0.11 12.5 5.0 0.29 11.2 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger RINGv PF12906.7 ORF33212 - 0.95 9.6 8.5 2.8 8.1 8.3 1.9 1 1 1 2 2 2 0 RING-variant domain Zf_RING PF16744.5 ORF33212 - 1.3 9.2 8.1 0.31 11.2 4.9 1.7 2 0 0 2 2 1 0 KIAA1045 RING finger DUF1794 PF08768.11 ORF32402 - 5.3e-15 55.6 0.0 6.3e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1794) SMAP PF15477.6 ORF32336 - 0.037 15.0 0.9 0.071 14.1 0.9 1.5 1 0 0 1 1 1 0 Small acidic protein family DUF5474 PF17568.2 ORF32336 - 0.064 13.3 0.5 0.2 11.7 0.1 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5474) DUF1233 PF06806.12 ORF32336 - 0.1 12.2 0.3 0.25 10.9 0.1 1.8 2 0 0 2 2 2 0 Putative excisionase (DUF1233) SHIPPO-rpt PF07004.12 ORF31026 - 0.0024 18.7 0.4 0.0024 18.7 0.4 2.8 3 0 0 3 3 3 1 Sperm-tail PG-rich repeat EF-hand_7 PF13499.6 ORF30219 - 5.9e-07 29.9 5.6 9.1e-07 29.2 2.8 2.4 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF30219 - 1.8e-06 27.0 4.8 0.0001 21.6 0.1 3.6 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF30219 - 1.6e-05 24.5 3.5 0.0002 21.0 0.2 3.2 3 0 0 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 ORF30219 - 1.8e-05 24.0 0.7 0.00059 19.2 0.1 2.8 2 0 0 2 2 2 1 EF hand FtsH_ext PF06480.15 ORF30219 - 0.0011 19.3 4.3 1.8 9.0 4.3 2.2 1 1 0 1 1 1 1 FtsH Extracellular Rep_3 PF01051.21 ORF30219 - 0.0088 15.9 2.2 0.012 15.5 2.2 1.3 1 0 0 1 1 1 1 Initiator Replication protein Dockerin_1 PF00404.18 ORF30219 - 0.025 14.7 2.9 0.59 10.4 0.0 2.6 3 0 0 3 3 3 0 Dockerin type I domain CitX PF03802.14 ORF30219 - 0.028 14.2 0.7 0.046 13.5 0.7 1.4 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Vps4_C PF09336.10 ORF30219 - 0.053 13.5 0.3 0.7 9.9 0.1 2.4 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain MORN PF02493.20 ORF27256 - 6.4e-10 38.3 28.6 0.00032 20.4 2.2 4.5 4 0 0 4 4 4 4 MORN repeat DUF3048_C PF17479.2 ORF27256 - 0.029 14.8 8.3 0.083 13.3 7.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Tyosinase_C PF18132.1 ORF25779 - 0.054 14.2 0.0 0.071 13.8 0.0 1.2 1 0 0 1 1 1 0 Tyosinase C-terminal domain DUF5595 PF18077.1 ORF24542 - 0.0084 16.2 2.0 0.014 15.5 0.4 2.3 2 1 1 3 3 3 1 Domain of unknown function (DUF5595) Acyltransf_C PF16076.5 ORF24542 - 0.16 12.1 1.1 0.22 11.6 0.1 1.7 2 0 0 2 2 2 0 Acyltransferase C-terminus RPAP3_C PF13877.6 ORF24542 - 0.46 11.1 2.7 12 6.5 0.1 3.0 1 1 1 2 2 2 0 Potential Monad-binding region of RPAP3 RecX PF02631.16 ORF23525 - 4.8e-31 107.8 0.3 1.3e-30 106.3 0.1 1.7 2 0 0 2 2 2 1 RecX family HTH_21 PF13276.6 ORF23525 - 0.081 13.1 0.1 0.35 11.0 0.0 2.1 2 0 0 2 2 2 0 HTH-like domain Arm-DNA-bind_5 PF17293.2 ORF23316 - 0.031 14.7 1.0 0.04 14.4 1.0 1.2 1 0 0 1 1 1 0 Arm DNA-binding domain ANAPC4_WD40 PF12894.7 ORF22827 - 0.011 16.0 0.0 0.033 14.5 0.0 1.7 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF22827 - 0.2 12.6 0.3 1.1 10.2 0.0 2.4 3 0 0 3 3 3 0 WD domain, G-beta repeat C2 PF00168.30 ORF20579 - 3.2e-14 53.1 0.1 6.9e-14 52.0 0.0 1.5 1 1 0 1 1 1 1 C2 domain DUF305 PF03713.13 ORF18049 - 0.00023 21.3 0.1 0.00028 21.0 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF305) SurA_N_3 PF13624.6 ORF18049 - 0.11 12.2 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 SurA N-terminal domain TRP PF06011.12 ORF16974 - 9.5e-05 21.3 9.9 0.0001 21.2 9.9 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel PPR_2 PF13041.6 ORF16473 - 6.8e-08 32.6 0.2 7.2e-06 26.1 0.0 2.0 1 1 1 2 2 2 2 PPR repeat family PPR PF01535.20 ORF16473 - 0.0007 19.7 0.4 0.43 10.9 0.1 3.7 3 1 0 3 3 3 1 PPR repeat PPR_3 PF13812.6 ORF16473 - 0.028 14.5 0.0 0.049 13.7 0.0 1.4 1 0 0 1 1 1 0 Pentatricopeptide repeat domain OSK PF17182.4 ORF16473 - 0.23 10.7 0.0 0.27 10.4 0.0 1.1 1 0 0 1 1 1 0 OSK domain ALMT PF11744.8 ORF16406 - 0.061 12.2 0.4 0.072 11.9 0.4 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter WW PF00397.26 ORF15880 - 0.46 10.6 5.0 0.52 10.4 0.0 2.9 2 1 1 3 3 3 0 WW domain Aldedh PF00171.22 ORF1533 - 1.4e-52 178.8 0.0 1.5e-52 178.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Sdh5 PF03937.16 ORF15067 - 5.1e-22 77.6 0.7 5.1e-22 77.6 0.7 1.7 2 0 0 2 2 2 1 Flavinator of succinate dehydrogenase Pes-10 PF07149.11 ORF15067 - 0.041 13.0 0.3 0.055 12.5 0.3 1.3 1 1 0 1 1 1 0 Pes-10 Snf7 PF03357.21 ORF12217 - 6e-14 52.0 12.1 7e-14 51.8 12.1 1.0 1 0 0 1 1 1 1 Snf7 Prefoldin_2 PF01920.20 ORF12217 - 0.031 14.2 0.9 0.031 14.2 0.9 2.2 2 0 0 2 2 2 0 Prefoldin subunit BLOC1_2 PF10046.9 ORF12217 - 0.073 13.4 4.9 3.5 8.0 0.4 3.0 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Mce4_CUP1 PF11887.8 ORF12217 - 0.1 12.0 0.3 0.18 11.2 0.3 1.5 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative bZIP_1 PF00170.21 ORF12217 - 4.6 7.4 9.0 4 7.6 0.2 3.5 4 1 0 4 4 4 0 bZIP transcription factor UPF0113_N PF17833.1 ORF112230 - 4.5e-30 104.0 0.4 7.9e-30 103.3 0.4 1.4 1 0 0 1 1 1 1 UPF0113 Pre-PUA domain UPF0113 PF03657.13 ORF112230 - 5.4e-18 65.0 0.0 9.2e-18 64.3 0.0 1.4 1 0 0 1 1 1 1 UPF0113 PUA domain DUF1951 PF09188.10 ORF112230 - 0.024 14.6 0.2 0.031 14.3 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1951) adh_short PF00106.25 ORF111372 - 1.2e-05 24.9 0.0 0.033 13.7 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF111372 - 0.028 14.0 0.0 0.036 13.6 0.0 1.4 1 1 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Metallothio_Euk PF12749.7 ORF110906 - 0.27 11.4 10.6 0.075 13.2 2.2 2.3 2 0 0 2 2 2 0 Eukaryotic metallothionein LRV_FeS PF05484.11 ORF110391 - 0.083 12.9 0.6 18 5.4 0.0 2.3 2 0 0 2 2 2 0 LRV protein FeS4 cluster Integrase_Zn PF02022.19 ORF110391 - 0.1 12.6 0.5 4 7.5 0.1 2.8 3 0 0 3 3 3 0 Integrase Zinc binding domain Acid_PPase PF12689.7 ORF107259 - 1.3e-34 119.4 0.0 1.6e-34 119.2 0.0 1.0 1 0 0 1 1 1 1 Acid Phosphatase NIF PF03031.18 ORF107259 - 0.11 12.3 0.0 0.17 11.6 0.0 1.3 1 1 0 1 1 1 0 NLI interacting factor-like phosphatase TPR_12 PF13424.6 ORF10720 - 3.9e-07 30.2 0.8 4.2e-05 23.8 0.1 3.0 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF10720 - 1.7e-06 27.7 0.3 0.13 12.5 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF10720 - 2.8e-06 26.9 0.3 0.11 12.3 0.1 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF10720 - 5.2e-05 23.0 0.3 0.84 9.6 0.1 4.2 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF10720 - 0.00016 21.3 1.2 0.0016 18.1 0.4 2.9 2 1 1 3 3 3 1 TPR repeat TPR_19 PF14559.6 ORF10720 - 0.00073 20.0 1.0 0.002 18.6 0.5 2.0 2 0 0 2 2 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF10720 - 0.00075 20.1 2.2 0.0012 19.5 0.2 2.2 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF10720 - 0.014 15.4 2.0 7.5 6.8 0.0 4.0 3 2 1 4 4 4 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF10720 - 0.021 15.4 0.1 31 5.6 0.0 3.6 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF10720 - 0.047 14.5 3.6 1.5 9.8 0.1 3.6 3 2 1 4 4 4 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF10720 - 0.054 13.6 0.2 0.65 10.2 0.0 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF10720 - 0.12 12.6 1.8 34 5.0 0.0 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat Peptidase_S11 PF00768.20 ORF10720 - 0.13 11.7 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase TPR_17 PF13431.6 ORF10720 - 0.13 12.7 0.0 72 4.1 0.0 3.5 4 0 0 4 4 3 0 Tetratricopeptide repeat DUF4332 PF14229.6 ORF107160 - 0.094 13.0 0.1 0.17 12.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) THP2 PF09432.10 ORF107160 - 0.17 11.9 0.1 1.1 9.3 0.1 2.2 2 1 1 3 3 3 0 Tho complex subunit THP2 Med1 PF10744.9 ORF106772 - 0.0047 16.0 0.7 0.0053 15.9 0.2 1.4 2 0 0 2 2 2 1 Mediator of RNA polymerase II transcription subunit 1 DUF211 PF02680.14 ORF106772 - 0.13 12.5 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized ArCR, COG1888 PhoLip_ATPase_N PF16209.5 ORF106772 - 0.79 9.5 4.0 0.64 9.8 1.1 2.3 2 1 1 3 3 3 0 Phospholipid-translocating ATPase N-terminal CRAL_TRIO PF00650.20 ORF105155 - 0.0073 16.0 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF105155 - 0.07 13.3 0.7 0.16 12.2 0.7 1.6 1 0 0 1 1 1 0 CRAL/TRIO, N-terminal domain Glyco_hydro_38N PF01074.22 ORF10408 - 5.2e-38 131.0 3.8 6.1e-38 130.8 3.8 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain ALG11_N PF15924.5 ORF103634 - 1.1e-26 94.3 0.0 1.3e-26 93.9 0.0 1.1 1 0 0 1 1 1 1 ALG11 mannosyltransferase N-terminus DCB PF16213.5 ORF103634 - 0.0082 15.8 0.3 0.011 15.5 0.3 1.1 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 CRAL_TRIO_2 PF13716.6 ORF103634 - 0.07 13.3 0.0 0.099 12.8 0.0 1.4 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain Mrr_N PF14338.6 ORF103314 - 0.025 14.7 0.3 0.048 13.8 0.3 1.5 1 0 0 1 1 1 0 Mrr N-terminal domain ALIX_LYPXL_bnd PF13949.6 ORF103314 - 0.057 12.7 3.9 0.073 12.4 3.9 1.1 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV Glyco_hydro_38N PF01074.22 ORF103115 - 5.2e-38 131.0 3.8 6.1e-38 130.8 3.8 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain FPV060 PF17614.2 ORF100718 - 0.025 14.0 0.3 0.024 14.0 0.3 1.3 1 1 0 1 1 1 0 Viral CC-type chemokine DUF3418 PF11898.8 NODE_41546_length_493_cov_2.705240_g33983_i0reverse_frame_1 - 3.2e-49 168.1 0.7 3.7e-49 167.9 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) OB_NTP_bind PF07717.16 NODE_41546_length_493_cov_2.705240_g33983_i0reverse_frame_1 - 2.5e-14 53.4 0.0 4e-14 52.7 0.0 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Peptidase_S49_N PF08496.10 NODE_41533_length_493_cov_84.355895_g33970_i0reverse_frame_1 - 3.1 7.8 17.1 0.078 13.0 2.4 2.0 1 1 1 2 2 2 0 Peptidase family S49 N-terminal YwiC PF14256.6 NODE_41523_length_493_cov_147.978166_g33960_i0reverse_frame_1 - 0.16 12.3 0.8 0.29 11.4 0.8 1.3 1 0 0 1 1 1 0 YwiC-like protein CS PF04969.16 NODE_41520_length_493_cov_170.379913_g33957_i0reverse_frame_1 - 1.1e-06 29.6 0.0 1.7e-06 28.9 0.0 1.3 1 0 0 1 1 1 1 CS domain CNDH2_N PF06278.11 NODE_41520_length_493_cov_170.379913_g33957_i0reverse_frame_1 - 0.18 12.0 0.6 0.22 11.8 0.0 1.4 2 0 0 2 2 2 0 Condensin II complex subunit CAP-H2 or CNDH2, N-terminal DSPc PF00782.20 NODE_41517_length_493_cov_199.052402_g33954_i0reverse_frame_1 - 8.9e-20 70.9 0.0 1.1e-19 70.6 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 NODE_41517_length_493_cov_199.052402_g33954_i0reverse_frame_1 - 0.0005 20.2 0.0 0.00072 19.7 0.0 1.3 1 0 0 1 1 1 1 Inositol hexakisphosphate Y_phosphatase PF00102.27 NODE_41517_length_493_cov_199.052402_g33954_i0reverse_frame_1 - 0.0064 16.1 0.0 0.0086 15.7 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Init_tRNA_PT PF04179.12 NODE_41517_length_493_cov_199.052402_g33954_i0reverse_frame_1 - 0.0081 16.5 0.0 0.013 15.8 0.0 1.4 1 0 0 1 1 1 1 Rit1 DUSP-like domain Y_phosphatase3 PF13350.6 NODE_41517_length_493_cov_199.052402_g33954_i0reverse_frame_1 - 0.015 15.3 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Tyrosine phosphatase family ELYS PF13934.6 NODE_41517_length_493_cov_199.052402_g33954_i0reverse_frame_1 - 0.2 11.6 0.0 0.26 11.2 0.0 1.2 1 0 0 1 1 1 0 Nuclear pore complex assembly NapE PF06796.11 NODE_41509_length_493_cov_388.467249_g33947_i0forward_frame_1 - 6 6.5 6.9 0.42 10.2 1.6 1.8 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE TBCC_N PF16752.5 NODE_41481_length_494_cov_6.420479_g33923_i0reverse_frame_1 - 0.0092 16.4 1.3 0.016 15.7 1.3 1.4 1 0 0 1 1 1 1 Tubulin-specific chaperone C N-terminal domain Seryl_tRNA_N PF02403.22 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.0043 17.3 21.2 0.26 11.5 3.4 3.3 2 1 1 3 3 3 3 Seryl-tRNA synthetase N-terminal domain DUF5082 PF16888.5 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.022 15.0 25.7 0.17 12.2 5.5 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Unstab_antitox PF09720.10 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.031 14.3 2.7 0.48 10.5 0.2 3.1 3 0 0 3 3 3 0 Putative addiction module component ERM PF00769.19 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.06 13.1 25.7 0.069 13.0 25.7 1.0 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Spc7 PF08317.11 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.28 10.0 25.6 0.43 9.4 23.9 1.9 1 1 0 1 1 1 0 Spc7 kinetochore protein ADIP PF11559.8 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.73 9.9 25.1 82 3.3 24.9 2.7 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding Phage_GP20 PF06810.11 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.83 9.4 26.1 1.1 9.1 5.6 3.2 1 1 1 3 3 3 0 Phage minor structural protein GP20 V_ATPase_I PF01496.19 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 1 7.2 19.8 1.2 7.0 19.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family UPF0061 PF02696.14 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 1.2 7.9 8.9 1.4 7.6 8.9 1.1 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family Striatin PF08232.12 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 1.7 9.2 18.8 0.27 11.8 14.2 1.8 1 1 1 2 2 2 0 Striatin family Exonuc_VII_L PF02601.15 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 2.2 7.8 14.4 3.2 7.2 14.4 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit TPR_MLP1_2 PF07926.12 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 2.5 8.2 25.1 8.3 6.5 19.2 3.1 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein NPV_P10 PF05531.12 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 4.1 7.9 14.2 32 5.1 7.9 3.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Syntaxin-6_N PF09177.11 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 4.3 8.0 15.9 68 4.1 15.9 2.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal SOGA PF11365.8 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 6.5 8.0 18.6 0.55 11.4 9.8 2.7 1 1 1 2 2 2 0 Protein SOGA YtxH PF12732.7 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 7 7.3 8.8 57 4.4 5.1 3.1 1 1 1 2 2 2 0 YtxH-like protein APG6_N PF17675.1 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 7.7 7.0 28.1 0.38 11.3 16.9 2.6 1 1 2 3 3 3 0 Apg6 coiled-coil region Spc24 PF08286.11 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 8.3 6.7 22.2 18 5.6 12.5 3.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 SlyX PF04102.12 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 8.8 7.0 19.0 2.3 8.9 2.9 3.5 2 1 1 3 3 3 0 SlyX DHR10 PF18595.1 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 9.1 6.4 27.5 2.5 8.2 17.9 3.2 2 1 0 2 2 2 0 Designed helical repeat protein 10 domain Shikimate_DH PF01488.20 NODE_41477_length_494_cov_50.143791_g33919_i0forward_frame_1 - 0.00055 20.0 0.0 0.00077 19.5 0.0 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GFO_IDH_MocA PF01408.22 NODE_41477_length_494_cov_50.143791_g33919_i0forward_frame_1 - 0.00061 20.6 0.1 0.0016 19.2 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold F420_oxidored PF03807.17 NODE_41477_length_494_cov_50.143791_g33919_i0forward_frame_1 - 0.1 13.2 0.2 0.23 12.1 0.0 1.6 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Aconitase PF00330.20 NODE_41474_length_494_cov_61.464052_g33916_i0reverse_frame_1 - 0.23 10.4 0.1 0.29 10.1 0.1 1.1 1 0 0 1 1 1 0 Aconitase family (aconitate hydratase) Stc1 PF12898.7 NODE_41464_length_494_cov_144.309368_g33906_i0reverse_frame_1 - 0.0026 18.3 1.7 0.0045 17.5 1.7 1.4 1 0 0 1 1 1 1 Stc1 domain DAGK_cat PF00781.24 NODE_41464_length_494_cov_144.309368_g33906_i0reverse_frame_1 - 0.13 11.9 0.0 2 8.1 0.0 2.1 1 1 1 2 2 2 0 Diacylglycerol kinase catalytic domain DUF974 PF06159.13 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_1 - 0.09 12.6 1.2 0.12 12.1 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF974) MBA1 PF07961.11 NODE_41441_length_495_cov_2.843478_g33885_i0reverse_frame_1 - 0.039 13.0 0.2 0.054 12.6 0.2 1.2 1 0 0 1 1 1 0 MBA1-like protein RPA PF10134.9 NODE_41441_length_495_cov_2.843478_g33885_i0reverse_frame_1 - 0.093 12.2 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 Replication initiator protein A CheR_N PF03705.15 NODE_41441_length_495_cov_2.843478_g33885_i0forward_frame_1 - 1e-18 66.8 1.7 1.5e-18 66.3 1.7 1.3 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain PriC PF07445.12 NODE_41441_length_495_cov_2.843478_g33885_i0forward_frame_1 - 0.018 15.0 2.9 0.022 14.7 2.9 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC DUF4948 PF16306.5 NODE_41441_length_495_cov_2.843478_g33885_i0forward_frame_1 - 0.13 12.1 0.1 0.16 11.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4948) Synaptobrevin PF00957.21 NODE_41441_length_495_cov_2.843478_g33885_i0forward_frame_1 - 0.21 11.4 5.0 0.31 10.9 2.4 2.0 2 0 0 2 2 2 0 Synaptobrevin Pkinase PF00069.25 NODE_41430_length_495_cov_56.876087_g33875_i0forward_frame_1 - 0.0051 16.2 0.0 0.0057 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DUF900 PF05990.12 NODE_41430_length_495_cov_56.876087_g33875_i0forward_frame_1 - 0.052 13.1 0.0 0.065 12.7 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) XRN1_DBM PF18245.1 NODE_41429_length_495_cov_65.180435_g33874_i0forward_frame_1 - 0.78 9.8 2.5 1.4 9.0 0.1 2.4 3 0 0 3 3 3 0 5-3 exonuclease XRN1 DCP1-binding motif DUF4231 PF14015.6 NODE_41427_length_495_cov_74.356522_g33872_i0forward_frame_1 - 3.9 8.0 7.6 0.32 11.5 1.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4231) PKHD_C PF18331.1 NODE_41414_length_495_cov_107.663043_g33859_i0reverse_frame_1 - 0.23 11.6 1.8 25 5.1 0.0 3.5 2 1 2 4 4 4 0 PKHD-type hydroxylase C-terminal domain PKcGMP_CC PF16808.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 4.9e-08 32.7 1.0 0.15 11.9 0.0 5.9 1 1 6 7 7 7 2 Coiled-coil N-terminus of cGMP-dependent protein kinase Fez1 PF06818.15 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 1.1e-07 32.5 6.7 0.0046 17.4 0.1 2.2 1 1 1 2 2 2 2 Fez1 KASH_CCD PF14662.6 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 4.9e-07 29.8 1.4 0.065 13.1 0.0 3.1 1 1 2 3 3 3 2 Coiled-coil region of CCDC155 or KASH DUF641 PF04859.12 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 3.3e-06 27.4 2.7 0.31 11.4 2.7 3.5 1 1 0 1 1 1 1 Plant protein of unknown function (DUF641) Lebercilin PF15619.6 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 9.6e-06 25.4 7.5 0.013 15.2 0.2 2.2 1 1 1 2 2 2 2 Ciliary protein causing Leber congenital amaurosis disease Angiomotin_C PF12240.8 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 3.5e-05 23.5 3.0 0.25 10.9 0.1 3.5 1 1 2 3 3 3 3 Angiomotin C terminal HrpB7 PF09486.10 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 4.8e-05 23.8 0.2 0.34 11.3 0.0 3.0 1 1 2 3 3 3 1 Bacterial type III secretion protein (HrpB7) ADIP PF11559.8 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 9.2e-05 22.6 13.0 0.00013 22.1 2.2 2.3 1 1 0 2 2 2 1 Afadin- and alpha -actinin-Binding DUF3552 PF12072.8 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.00014 21.4 8.3 0.045 13.2 0.1 2.8 1 1 2 3 3 3 3 Domain of unknown function (DUF3552) FAM76 PF16046.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.00023 20.6 12.3 0.65 9.3 0.3 3.1 1 1 2 3 3 3 3 FAM76 protein DUF5012 PF16404.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.00033 20.8 1.2 0.82 9.8 0.1 2.8 1 1 2 3 3 3 1 Domain of unknown function (DUF5012) Spc7 PF08317.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.00033 19.6 11.6 0.005 15.8 8.5 2.7 1 1 0 1 1 1 1 Spc7 kinetochore protein DUF4407 PF14362.6 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.00038 19.9 11.2 0.0025 17.2 11.2 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4407) CC2-LZ PF16516.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.00046 20.5 7.3 2.8 8.4 0.3 4.0 1 1 3 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator SlyX PF04102.12 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.00058 20.4 3.9 0.17 12.5 1.0 3.7 1 1 3 4 4 4 1 SlyX ATG16 PF08614.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.00077 19.7 5.4 0.0088 16.3 0.2 2.4 1 1 1 2 2 2 1 Autophagy protein 16 (ATG16) AAA_13 PF13166.6 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.00088 18.1 1.2 0.00088 18.1 1.2 2.0 1 1 1 2 2 2 1 AAA domain FPP PF05911.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0013 17.0 5.0 0.0045 15.3 5.0 1.7 1 1 0 1 1 1 1 Filament-like plant protein, long coiled-coil TolA_bind_tri PF16331.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0017 18.4 14.6 0.04 14.0 1.6 4.1 1 1 3 4 4 4 1 TolA binding protein trimerisation NYD-SP28 PF14772.6 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0018 18.3 10.6 2.6 8.2 0.1 4.7 1 1 4 5 5 5 1 Sperm tail CEP63 PF17045.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0022 18.0 4.8 0.25 11.2 1.9 2.3 1 1 1 2 2 2 2 Centrosomal protein of 63 kDa Filament PF00038.21 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0025 17.5 8.7 0.009 15.6 1.5 2.3 1 1 1 2 2 2 1 Intermediate filament protein TMF_TATA_bd PF12325.8 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0039 17.4 7.6 0.74 10.1 1.8 3.5 1 1 2 3 3 3 1 TATA element modulatory factor 1 TATA binding CALCOCO1 PF07888.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0054 15.6 6.1 0.0067 15.3 6.1 1.1 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like Cast PF10174.9 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0056 15.0 7.8 0.0071 14.6 7.8 1.2 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone DUF3972 PF13118.6 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0057 17.1 6.2 0.042 14.3 0.1 3.1 2 1 1 3 3 3 1 Protein of unknown function (DUF3972) Bacillus_HBL PF05791.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0061 16.4 14.8 0.015 15.1 2.4 2.7 1 1 1 2 2 2 1 Bacillus haemolytic enterotoxin (HBL) HOOK PF05622.12 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0065 14.7 0.5 0.0065 14.7 0.5 1.9 1 1 1 2 2 2 2 HOOK protein DUF812 PF05667.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.0086 15.0 10.5 0.023 13.6 10.5 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF812) Wtap PF17098.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.014 15.3 0.4 5.5 6.9 0.0 3.1 1 1 2 3 3 3 0 WTAP/Mum2p family Golgin_A5 PF09787.9 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.018 14.5 11.9 7.8 5.9 4.1 3.3 1 1 0 2 2 2 0 Golgin subfamily A member 5 Glutaredoxin2_C PF04399.13 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.02 14.8 0.6 5 7.0 0.0 2.6 1 1 3 4 4 4 0 Glutaredoxin 2, C terminal domain DUF948 PF06103.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.022 15.0 3.3 0.053 13.8 0.5 2.6 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) UPF0242 PF06785.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.026 14.6 15.3 0.17 11.9 4.3 3.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus XLF PF09302.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.027 14.7 11.3 0.73 10.0 0.4 4.5 1 1 2 3 3 3 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component DUF5082 PF16888.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.033 14.5 23.2 0.7 10.2 1.0 4.1 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) FliJ PF02050.16 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.038 14.2 12.2 0.45 10.8 1.2 2.3 1 1 1 2 2 2 0 Flagellar FliJ protein CENP-F_leu_zip PF10473.9 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.041 13.9 4.6 0.064 13.3 0.1 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TMF_DNA_bd PF12329.8 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.042 13.8 19.9 0.2 11.7 1.4 4.2 1 1 3 4 4 4 0 TATA element modulatory factor 1 DNA binding HemX PF04375.14 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.043 13.1 9.6 0.1 11.9 2.8 2.3 1 1 2 3 3 3 0 HemX, putative uroporphyrinogen-III C-methyltransferase COG2 PF06148.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.049 13.7 2.0 0.24 11.5 0.1 2.3 1 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF3450 PF11932.8 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.054 12.8 7.8 0.66 9.2 0.6 2.5 1 1 3 4 4 4 0 Protein of unknown function (DUF3450) FlaC_arch PF05377.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.058 13.8 5.5 3.3 8.2 0.1 3.5 1 1 3 4 4 4 0 Flagella accessory protein C (FlaC) DUF16 PF01519.16 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.062 13.8 14.1 0.068 13.7 2.9 2.9 1 1 1 2 2 2 0 Protein of unknown function DUF16 Sec2p PF06428.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.066 13.2 8.9 0.45 10.5 0.0 3.8 2 1 3 5 5 4 0 GDP/GTP exchange factor Sec2p BST2 PF16716.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.067 13.8 9.7 0.27 11.8 0.5 3.4 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 TRAF_BIRC3_bd PF16673.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.07 12.9 6.4 1.5 8.7 0.1 3.4 1 1 2 4 4 4 0 TNF receptor-associated factor BIRC3 binding domain TACC_C PF05010.14 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.091 12.5 0.3 0.091 12.5 0.3 2.8 1 1 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF1664 PF07889.12 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.098 12.7 4.4 0.14 12.2 1.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) PspA_IM30 PF04012.12 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.11 12.1 3.9 0.24 10.9 0.3 2.5 1 1 1 2 2 2 0 PspA/IM30 family Atg14 PF10186.9 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.14 11.2 18.7 0.007 15.5 5.6 2.5 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 BLOC1_2 PF10046.9 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.14 12.5 7.1 2.3 8.6 0.3 3.2 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 MAD PF05557.13 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.14 10.5 9.6 0.41 9.0 9.4 1.6 1 1 0 1 1 1 0 Mitotic checkpoint protein USP8_interact PF08941.10 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.17 11.7 6.0 2.4 8.0 0.2 2.8 1 1 3 4 4 4 0 USP8 interacting DivIC PF04977.15 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.18 11.6 15.3 5.5 6.8 3.0 4.2 1 1 3 4 4 4 0 Septum formation initiator Fib_alpha PF08702.10 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.2 11.9 14.3 0.32 11.2 4.9 3.4 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Lectin_N PF03954.14 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.2 11.4 4.2 6.5 6.5 0.2 3.0 1 1 1 3 3 3 0 Hepatic lectin, N-terminal domain MPS2 PF17060.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.2 10.9 16.6 0.9 8.7 7.2 3.1 1 1 1 2 2 2 0 Monopolar spindle protein 2 Phage_TAC_5 PF08890.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.31 11.0 6.7 0.096 12.7 2.7 2.2 2 1 0 2 2 2 0 Phage XkdN-like tail assembly chaperone protein, TAC Prefoldin_2 PF01920.20 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.32 10.9 0.2 0.32 10.9 0.2 3.6 1 1 2 4 4 4 0 Prefoldin subunit SYCE1 PF15233.6 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.58 10.2 12.7 1.1 9.4 2.5 2.9 1 1 1 2 2 2 0 Synaptonemal complex central element protein 1 DUF2203 PF09969.9 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.61 10.8 5.8 0.42 11.3 0.3 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF724 PF05266.14 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.63 9.8 10.0 2.7 7.8 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF4200 PF13863.6 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 0.85 10.0 17.0 1.6 9.2 1.9 4.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4200) UME PF08064.13 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 2.3 8.2 3.6 6.5 6.7 0.2 2.7 2 1 1 3 3 3 0 UME (NUC010) domain DUF1192 PF06698.11 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 4.9 7.3 6.2 4.7 7.3 1.2 3.1 3 2 2 5 5 2 0 Protein of unknown function (DUF1192) DUF4795 PF16043.5 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_1 - 5.1 6.6 12.2 7.1 6.2 3.4 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Ribosomal_S25 PF03297.15 NODE_41397_length_495_cov_3496.858696_g33844_i0reverse_frame_1 - 2.6e-28 98.2 3.1 2.6e-28 98.2 3.1 2.1 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 NODE_41397_length_495_cov_3496.858696_g33844_i0reverse_frame_1 - 0.0096 15.5 0.5 0.012 15.2 0.5 1.2 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 NODE_41397_length_495_cov_3496.858696_g33844_i0reverse_frame_1 - 0.096 12.3 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 NODE_41397_length_495_cov_3496.858696_g33844_i0reverse_frame_1 - 0.49 10.8 6.4 24 5.4 6.4 2.2 1 1 0 1 1 1 0 Recombinase Ammonium_transp PF00909.21 NODE_41395_length_495_cov_4863.173913_g33842_i0forward_frame_1 - 7e-07 28.3 0.0 1e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Ammonium Transporter Family Ank_2 PF12796.7 NODE_41394_length_495_cov_50544.034783_g33841_i0forward_frame_1 - 1.2e-15 57.8 0.0 1e-09 38.8 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_41394_length_495_cov_50544.034783_g33841_i0forward_frame_1 - 1.4e-15 57.4 0.0 1.6e-07 31.7 0.0 3.3 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_41394_length_495_cov_50544.034783_g33841_i0forward_frame_1 - 5.3e-15 55.3 0.4 5.8e-06 26.5 0.1 2.6 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_41394_length_495_cov_50544.034783_g33841_i0forward_frame_1 - 5.1e-14 52.0 0.0 0.0011 19.3 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 NODE_41394_length_495_cov_50544.034783_g33841_i0forward_frame_1 - 6e-10 38.5 0.0 0.13 12.9 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeat DUF3127 PF11325.8 NODE_41391_length_496_cov_1.989154_g33838_i0reverse_frame_2 - 0.051 13.8 0.6 0.24 11.7 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3127) Silic_transp PF03842.13 NODE_41385_length_496_cov_2.362256_g33832_i0reverse_frame_2 - 0.0077 14.6 0.1 0.01 14.2 0.1 1.1 1 0 0 1 1 1 1 Silicon transporter Pox_L5 PF04872.13 NODE_41385_length_496_cov_2.362256_g33832_i0reverse_frame_2 - 0.16 11.9 1.2 0.19 11.6 0.1 1.6 2 0 0 2 2 2 0 Poxvirus L5 protein family Nop52 PF05997.12 NODE_41384_length_496_cov_2.527115_g33831_i0reverse_frame_3 - 6.9e-31 107.7 4.8 8.2e-31 107.5 4.8 1.0 1 0 0 1 1 1 1 Nucleolar protein,Nop52 Imm43 PF15570.6 NODE_41383_length_496_cov_2.574837_g33830_i0forward_frame_2 - 0.57 10.2 5.0 14 5.7 5.0 2.2 1 1 0 1 1 1 0 Immunity protein 43 Ribosom_S30AE_C PF16321.5 NODE_41380_length_496_cov_3.227766_g33827_i0reverse_frame_3 - 0.16 11.7 0.4 0.31 10.8 0.4 1.4 1 0 0 1 1 1 0 Sigma 54 modulation/S30EA ribosomal protein C terminus IMS_C PF11799.8 NODE_41377_length_496_cov_4.119306_g33824_i0reverse_frame_3 - 0.003 18.2 0.2 0.0037 18.0 0.2 1.2 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain SNX17_FERM_C PF18116.1 NODE_41362_length_496_cov_82.802603_g33810_i0reverse_frame_3 - 0.12 12.5 0.1 0.2 11.7 0.1 1.4 1 0 0 1 1 1 0 Sorting Nexin 17 FERM C-terminal domain PaaX_C PF08223.11 NODE_41357_length_496_cov_98.932755_g33805_i0forward_frame_3 - 0.017 15.4 0.0 0.047 14.0 0.0 1.7 1 1 1 2 2 2 0 PaaX-like protein C-terminal domain Calpain_III PF01067.22 NODE_41354_length_496_cov_133.232104_g33803_i0reverse_frame_3 - 1e-16 61.5 0.6 1.4e-16 61.1 0.6 1.2 1 0 0 1 1 1 1 Calpain large subunit, domain III Tmemb_9 PF05434.11 NODE_41354_length_496_cov_133.232104_g33803_i0forward_frame_2 - 1.1 9.1 4.2 1.6 8.6 4.2 1.2 1 0 0 1 1 1 0 TMEM9 NADHdh_A3 PF14987.6 NODE_41326_length_496_cov_40423.468547_g30537_i8reverse_frame_2 - 0.022 15.1 0.0 0.032 14.5 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 Hum_adeno_E3A PF05393.11 NODE_41313_length_497_cov_2.619048_g33765_i0forward_frame_3 - 5.4 7.1 6.8 1.1 9.3 3.0 1.8 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein FancD2 PF14631.6 NODE_41312_length_497_cov_2.816017_g33764_i0forward_frame_3 - 0.14 9.6 0.0 0.16 9.4 0.0 1.0 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease DUF1590 PF07629.11 NODE_41309_length_497_cov_3.398268_g33761_i0reverse_frame_3 - 0.067 13.0 1.5 1.7 8.5 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1590) GSDH PF07995.11 NODE_41309_length_497_cov_3.398268_g33761_i0forward_frame_3 - 3.7e-68 230.3 0.9 4e-68 230.2 0.9 1.0 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase Metallophos PF00149.28 NODE_41304_length_497_cov_31.781385_g33756_i0reverse_frame_2 - 0.018 15.5 0.0 0.036 14.5 0.0 1.4 2 0 0 2 2 2 0 Calcineurin-like phosphoesterase RNA_pol_Rpb4 PF03874.16 NODE_41300_length_497_cov_74.679654_g33752_i0forward_frame_3 - 0.13 12.6 3.7 0.18 12.2 3.7 1.3 1 0 0 1 1 1 0 RNA polymerase Rpb4 DUF1178 PF06676.11 NODE_41300_length_497_cov_74.679654_g33752_i0forward_frame_3 - 0.13 12.7 1.2 0.19 12.1 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) PET PF06297.14 NODE_41290_length_497_cov_101.530303_g33742_i0forward_frame_2 - 0.069 13.5 0.2 0.13 12.6 0.2 1.4 1 0 0 1 1 1 0 PET Domain Elf1 PF05129.13 NODE_41274_length_497_cov_358.917749_g33726_i0forward_frame_3 - 1.2e-24 86.1 0.1 1.8e-24 85.6 0.1 1.2 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like zf-met PF12874.7 NODE_41274_length_497_cov_358.917749_g33726_i0forward_frame_3 - 0.081 13.4 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 Zinc-finger of C2H2 type COMM_domain PF07258.14 NODE_41273_length_497_cov_364.662338_g33353_i1reverse_frame_3 - 0.058 13.5 0.5 0.091 12.9 0.5 1.3 1 0 0 1 1 1 0 COMM domain EF-hand_8 PF13833.6 NODE_41273_length_497_cov_364.662338_g33353_i1reverse_frame_2 - 0.0075 16.1 0.7 0.012 15.4 0.7 1.4 1 0 0 1 1 1 1 EF-hand domain pair EspA PF03433.13 NODE_41273_length_497_cov_364.662338_g33353_i1reverse_frame_2 - 0.021 14.7 4.6 0.027 14.3 4.6 1.1 1 0 0 1 1 1 0 EspA-like secreted protein Kelch_1 PF01344.25 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 2.7e-07 30.1 0.2 0.00024 20.6 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 3.1e-07 30.4 1.9 0.00033 20.8 0.0 2.7 2 1 1 3 3 3 2 Kelch motif Kelch_5 PF13854.6 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 5.3e-06 26.3 0.3 0.0044 17.0 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 1.3e-05 25.1 0.1 0.033 14.2 0.0 2.5 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 2.9e-05 23.9 0.2 0.25 11.4 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 0.004 17.4 0.2 0.65 10.3 0.0 2.9 3 1 0 3 3 3 1 Galactose oxidase, central domain DUF5478 PF17572.2 NODE_41267_length_498_cov_2.460043_g33722_i0forward_frame_3 - 0.067 13.3 0.3 0.14 12.3 0.3 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5478) PapC_N PF13954.6 NODE_41264_length_498_cov_2.792657_g33719_i0forward_frame_2 - 6.2e-30 104.1 0.0 7.1e-30 103.9 0.0 1.0 1 0 0 1 1 1 1 PapC N-terminal domain Cyclin PF08613.11 NODE_41257_length_498_cov_4.371490_g33712_i0forward_frame_3 - 3e-08 34.2 2.9 1.6e-07 31.8 2.9 1.9 1 1 0 1 1 1 1 Cyclin UPF0542 PF15086.6 NODE_41257_length_498_cov_4.371490_g33712_i0forward_frame_3 - 0.0061 16.5 0.1 0.011 15.7 0.1 1.5 1 0 0 1 1 1 1 Uncharacterised protein family UPF0542 EspA PF03433.13 NODE_41255_length_498_cov_20.481641_g33710_i0reverse_frame_2 - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 EspA-like secreted protein ATP-grasp_4 PF13535.6 NODE_41255_length_498_cov_20.481641_g33710_i0forward_frame_3 - 8.3e-12 45.0 0.0 1.1e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 NODE_41255_length_498_cov_20.481641_g33710_i0forward_frame_3 - 2.4e-10 40.3 0.0 1.6e-05 24.6 0.0 2.1 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.17 NODE_41255_length_498_cov_20.481641_g33710_i0forward_frame_3 - 3.5e-05 23.4 0.0 4.4e-05 23.1 0.0 1.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 NODE_41255_length_498_cov_20.481641_g33710_i0forward_frame_3 - 0.0031 17.6 0.0 0.0058 16.7 0.0 1.4 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 NODE_41255_length_498_cov_20.481641_g33710_i0forward_frame_3 - 0.012 15.4 0.0 3.1 7.5 0.0 2.1 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Dala_Dala_lig_C PF07478.13 NODE_41255_length_498_cov_20.481641_g33710_i0forward_frame_3 - 0.084 12.4 0.0 0.22 11.0 0.0 1.6 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus DASH_Ask1 PF08655.10 NODE_41252_length_498_cov_70.207343_g33707_i0reverse_frame_3 - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 DASH complex subunit Ask1 YqaH PF17448.2 NODE_41238_length_498_cov_107.250540_g33693_i0reverse_frame_2 - 0.045 14.1 0.0 0.091 13.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized YqaH-like AP2 PF00847.20 NODE_41238_length_498_cov_107.250540_g33693_i0reverse_frame_2 - 0.091 13.0 0.0 0.47 10.7 0.0 2.0 2 0 0 2 2 2 0 AP2 domain PPR_2 PF13041.6 NODE_41237_length_498_cov_116.693305_g33692_i0forward_frame_2 - 3.4e-05 23.9 0.0 0.04 14.1 0.0 3.0 1 1 3 4 4 4 3 PPR repeat family PPR_3 PF13812.6 NODE_41237_length_498_cov_116.693305_g33692_i0forward_frame_2 - 5.1e-05 23.3 0.0 0.21 11.7 0.0 3.1 2 1 1 3 3 3 2 Pentatricopeptide repeat domain PPR PF01535.20 NODE_41237_length_498_cov_116.693305_g33692_i0forward_frame_2 - 0.0075 16.4 0.0 3 8.3 0.0 2.7 3 0 0 3 3 3 2 PPR repeat PPR_1 PF12854.7 NODE_41237_length_498_cov_116.693305_g33692_i0forward_frame_2 - 0.012 15.3 0.0 9.8 6.0 0.0 3.0 3 0 0 3 3 3 0 PPR repeat PWI PF01480.17 NODE_41224_length_498_cov_398.926566_g33680_i0reverse_frame_2 - 6.2e-10 39.3 0.0 1.1e-09 38.5 0.0 1.3 1 0 0 1 1 1 1 PWI domain Pectate_lyase_2 PF06917.12 NODE_41224_length_498_cov_398.926566_g33680_i0reverse_frame_2 - 0.099 11.2 0.0 0.1 11.2 0.0 1.1 1 0 0 1 1 1 0 Periplasmic pectate lyase TPT PF03151.16 ORF99832 - 1.1e-07 31.5 7.2 1.3e-07 31.3 7.2 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF99832 - 2.1e-05 24.7 10.6 2.6e-05 24.4 10.6 1.1 1 0 0 1 1 1 1 EamA-like transporter family UAA PF08449.11 ORF99832 - 0.0049 16.1 6.9 0.0079 15.4 6.9 1.5 1 1 0 1 1 1 1 UAA transporter family C2 PF00168.30 ORF99800 - 1.1e-15 57.8 0.0 2.5e-15 56.6 0.0 1.5 1 1 1 2 2 2 1 C2 domain PPR_2 PF13041.6 ORF99496 - 9e-20 70.6 0.8 1.4e-09 37.9 0.0 4.1 3 1 1 4 4 4 4 PPR repeat family PPR PF01535.20 ORF99496 - 5e-17 60.9 1.8 5.8e-06 26.2 0.1 4.1 4 0 0 4 4 4 4 PPR repeat PPR_3 PF13812.6 ORF99496 - 1.6e-13 50.5 0.0 1.7e-08 34.4 0.0 3.9 2 1 2 4 4 4 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF99496 - 1.3e-06 28.0 1.9 0.081 12.6 0.0 3.5 3 1 0 3 3 3 2 PPR repeat PPR_long PF17177.4 ORF99496 - 3.6e-05 23.2 0.1 6.1e-05 22.5 0.1 1.4 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP Nucleopor_Nup85 PF07575.13 ORF99496 - 0.096 11.2 1.0 0.18 10.3 0.5 1.7 1 1 1 2 2 2 0 Nup85 Nucleoporin DUF3364 PF11844.8 ORF99343 - 0.048 13.9 0.2 0.18 12.1 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3364) DUF5521 PF17659.1 ORF99343 - 0.62 7.8 5.6 0.11 10.3 0.7 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5521) PIP5K PF01504.18 ORF99271 - 6.5e-30 104.3 0.6 1.3e-29 103.3 0.6 1.5 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase MORN PF02493.20 ORF99077 - 1.1e-09 37.6 24.7 0.0018 18.0 3.0 4.5 4 0 0 4 4 4 3 MORN repeat Zap1_zf2 PF18217.1 ORF99077 - 0.051 13.6 1.7 0.43 10.6 0.3 2.5 2 0 0 2 2 2 0 Zap1 zinc finger 2 COX6A PF02046.15 ORF98521 - 0.16 12.4 0.0 0.26 11.8 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa DUF4637 PF15470.6 ORF97016 - 0.072 12.8 0.1 0.17 11.6 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Glyco_hydro_31 PF01055.26 ORF96814 - 9.6e-05 21.7 0.0 0.00013 21.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 ATP-synt_C PF00137.21 ORF9659 - 1e-31 109.0 34.9 6.6e-19 68.0 12.7 2.1 2 0 0 2 2 2 2 ATP synthase subunit C Cry1Ac_D5 PF17997.1 ORF9659 - 0.0063 16.4 0.0 0.0075 16.1 0.0 1.1 1 0 0 1 1 1 1 Insecticidal delta-endotoxin CryIA(c) domain 5 TctB PF07331.11 ORF9659 - 2.5 8.4 15.3 7.2 6.9 15.3 1.6 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family ApbA_C PF08546.11 ORF95013 - 8.1e-32 110.1 0.0 1e-31 109.8 0.0 1.1 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal VAD1-2 PF15310.6 ORF94437 - 0.098 12.5 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Vitamin A-deficiency (VAD) rat model signalling DUF3357 PF11837.8 ORF93909 - 0.21 12.0 1.4 4 7.9 0.0 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3357) HemY_N PF07219.13 ORF93909 - 8.3 6.7 7.7 3 8.1 0.2 2.5 3 0 0 3 3 3 0 HemY protein N-terminus Glyco_hydro_65m PF03632.15 ORF93714 - 0.016 14.1 0.0 0.02 13.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 65 central catalytic domain ABATE PF07336.11 ORF93714 - 1.3 9.7 10.8 6.8 7.4 7.3 2.1 1 1 1 2 2 2 0 Putative stress-induced transcription regulator XK-related PF09815.9 ORF92597 - 0.42 9.6 3.0 0.62 9.1 3.0 1.2 1 0 0 1 1 1 0 XK-related protein Peptidase_M15_3 PF08291.11 ORF92500 - 0.029 14.5 0.4 0.98 9.5 0.1 2.4 2 1 1 3 3 3 0 Peptidase M15 DUF3698 PF12479.8 ORF92500 - 0.05 14.1 0.0 0.09 13.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3698) TSC22 PF01166.18 ORF91490 - 0.0028 17.9 3.0 0.0028 17.9 3.0 2.0 2 0 0 2 2 2 1 TSC-22/dip/bun family THOC7 PF05615.13 ORF91490 - 0.016 15.5 3.4 0.016 15.5 3.4 1.9 1 1 0 2 2 2 0 Tho complex subunit 7 Fungal_TACC PF12709.7 ORF91490 - 0.016 15.6 2.3 0.016 15.6 2.3 1.9 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Methyltransf_18 PF12847.7 ORF91490 - 0.029 14.3 1.5 0.065 13.2 1.2 1.9 1 1 0 1 1 1 0 Methyltransferase domain Ax_dynein_light PF10211.9 ORF91490 - 0.034 14.1 5.3 0.051 13.5 5.3 1.4 1 0 0 1 1 1 0 Axonemal dynein light chain RRM_9 PF18444.1 ORF91490 - 0.047 13.6 0.5 0.2 11.6 0.0 2.1 2 1 0 2 2 2 0 RNA recognition motif Mto2_bdg PF12808.7 ORF91490 - 0.066 13.5 0.9 0.19 12.0 0.9 1.9 1 0 0 1 1 1 0 Micro-tubular organiser Mto1 C-term Mto2-binding region DUF2681 PF10883.8 ORF91490 - 0.072 13.5 2.8 0.15 12.5 2.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2681) DivIVA PF05103.13 ORF91490 - 0.1 12.7 6.7 0.15 12.1 5.8 1.9 1 1 0 1 1 1 0 DivIVA protein bZIP_1 PF00170.21 ORF91490 - 0.11 12.6 0.8 0.11 12.6 0.8 2.2 3 0 0 3 3 2 0 bZIP transcription factor YabA PF06156.13 ORF91490 - 0.17 12.6 7.3 0.15 12.7 3.5 2.1 1 1 0 2 2 2 0 Initiation control protein YabA DUF2312 PF10073.9 ORF91490 - 0.23 11.1 3.9 0.31 10.7 2.5 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) DivIC PF04977.15 ORF91490 - 0.28 11.0 5.9 0.057 13.2 2.3 1.8 2 0 0 2 2 2 0 Septum formation initiator DUF3450 PF11932.8 ORF91490 - 0.78 9.0 5.8 0.62 9.3 3.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Cnn_1N PF07989.11 ORF91490 - 0.96 9.6 9.0 0.27 11.4 3.3 2.5 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 Helicase_C PF00271.31 ORF90034 - 7.8e-25 87.4 0.0 1.2e-24 86.8 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain tRNA-synt_1b PF00579.25 ORF90034 - 0.021 14.2 0.0 0.023 14.0 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) ERCC3_RAD25_C PF16203.5 ORF90034 - 0.21 10.7 0.0 0.26 10.5 0.0 1.1 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase Bac_surface_Ag PF01103.23 ORF89968 - 4.8e-51 174.2 1.7 5.4e-51 174.0 1.7 1.0 1 0 0 1 1 1 1 Surface antigen ShlB PF03865.13 ORF89968 - 0.025 14.0 0.3 0.22 10.9 0.0 2.3 2 1 1 3 3 3 0 Haemolysin secretion/activation protein ShlB/FhaC/HecB CHGN PF05679.16 ORF89968 - 0.15 10.8 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Chondroitin N-acetylgalactosaminyltransferase REV PF00424.18 ORF89441 - 0.1 12.7 0.9 0.22 11.5 0.3 1.7 2 0 0 2 2 2 0 REV protein (anti-repression trans-activator protein) SRP_SPB PF02978.19 ORF88649 - 0.0021 18.7 0.4 0.0021 18.7 0.4 1.8 2 0 0 2 2 2 1 Signal peptide binding domain FliG_N PF14842.6 ORF88649 - 0.02 15.4 0.3 0.047 14.2 0.3 1.7 1 1 0 1 1 1 0 FliG N-terminal domain Ehrlichia_rpt PF09528.10 ORF88649 - 1.1 8.7 2.8 0.87 9.1 0.1 2.1 2 1 0 2 2 2 0 Ehrlichia tandem repeat (Ehrlichia_rpt) RCC1_2 PF13540.6 ORF88392 - 6.2e-08 32.2 6.1 0.13 12.1 0.6 3.4 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF88392 - 0.0029 17.7 0.2 3 7.9 0.0 3.1 3 0 0 3 3 3 2 Uncharacterised ACR, YagE family COG1723 DUF687 PF05095.12 ORF87888 - 0.53 8.7 1.4 2.1 6.7 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF687) GRAM PF02893.20 ORF85115 - 1.7e-23 82.6 1.5 2.4e-23 82.2 1.5 1.2 1 0 0 1 1 1 1 GRAM domain Vps36_ESCRT-II PF11605.8 ORF85115 - 0.02 15.1 0.3 0.037 14.2 0.3 1.4 1 0 0 1 1 1 0 Vacuolar protein sorting protein 36 Vps36 DnaJ PF00226.31 ORF84327 - 0.00027 21.0 0.1 0.00066 19.7 0.0 1.6 1 1 1 2 2 2 1 DnaJ domain PGC7_Stella PF15549.6 ORF83987 - 0.075 13.0 0.2 0.11 12.5 0.2 1.2 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain Y1_Tnp PF01797.16 ORF83350 - 7.1e-05 22.9 1.7 0.00043 20.4 1.7 1.9 1 1 0 1 1 1 1 Transposase IS200 like Nucleoporin_FG2 PF15967.5 ORF83028 - 0.059 11.9 7.8 0.064 11.8 7.8 1.1 1 0 0 1 1 1 0 Nucleoporin FG repeated region Homeobox_KN PF05920.11 ORF82664 - 1.7e-16 59.8 0.3 3.1e-16 59.0 0.3 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF82664 - 1.8e-05 24.5 0.6 4e-05 23.4 0.3 1.7 2 0 0 2 2 2 1 Homeodomain RasGEF_N PF00618.20 ORF82664 - 0.039 14.2 0.9 0.071 13.3 0.9 1.6 1 0 0 1 1 1 0 RasGEF N-terminal motif Presenilin PF01080.17 ORF82664 - 5.8 5.6 6.2 5.4 5.7 6.2 1.2 1 0 0 1 1 1 0 Presenilin DAP PF15228.6 ORF82664 - 7.6 7.8 7.5 12 7.1 5.2 2.3 2 1 0 2 2 2 0 Death-associated protein DUF2681 PF10883.8 ORF81902 - 0.62 10.5 8.0 1 9.8 8.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) RR_TM4-6 PF06459.12 ORF81902 - 3 7.6 15.6 3.3 7.5 15.6 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Vfa1 PF08432.10 ORF81902 - 4.3 7.6 20.7 6 7.2 20.7 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 PrsW-protease PF13367.6 ORF80786 - 1.7e-10 40.7 0.1 2.1e-10 40.4 0.1 1.0 1 0 0 1 1 1 1 PrsW family intramembrane metalloprotease EF-hand_7 PF13499.6 ORF80524 - 4.9e-23 81.4 5.0 3.3e-11 43.5 0.2 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF80524 - 1.5e-22 77.4 9.0 6.6e-08 31.6 0.1 5.3 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF80524 - 1.6e-20 71.2 6.5 2.3e-08 33.3 0.1 4.9 4 1 0 4 4 4 3 EF-hand domain EF-hand_8 PF13833.6 ORF80524 - 1.6e-16 59.9 10.6 6.5e-12 45.1 0.8 3.6 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF80524 - 1.7e-12 47.5 0.1 3.6e-07 30.4 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF80524 - 4.9e-08 32.1 19.2 0.0012 18.2 1.4 5.8 6 1 0 6 6 6 2 EF hand EF-hand_14 PF17959.1 ORF80524 - 0.00026 21.3 0.9 0.18 12.2 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF80524 - 0.00028 20.8 4.7 0.067 13.1 0.3 3.0 1 1 2 3 3 3 1 Cytoskeletal-regulatory complex EF hand SurA_N_3 PF13624.6 ORF80524 - 0.0039 17.0 3.5 0.091 12.5 0.1 2.1 2 0 0 2 2 2 1 SurA N-terminal domain DUF3008 PF11450.8 ORF80524 - 0.0067 16.6 0.3 0.0067 16.6 0.3 2.7 3 0 0 3 3 3 1 Protein of unknwon function (DUF3008) SurA_N_2 PF13623.6 ORF80524 - 0.011 15.6 1.0 0.18 11.7 0.1 2.3 2 0 0 2 2 2 0 SurA N-terminal domain Dockerin_1 PF00404.18 ORF80524 - 0.026 14.7 0.0 0.092 12.9 0.0 1.9 2 0 0 2 2 2 0 Dockerin type I domain DUF3349 PF11829.8 ORF80524 - 0.037 14.8 1.2 14 6.6 0.1 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF3349) FlgD PF03963.14 ORF80524 - 0.085 13.2 0.3 0.16 12.3 0.1 1.7 2 0 0 2 2 2 0 Flagellar hook capping protein - N-terminal region DUF1840 PF08895.11 ORF80524 - 0.091 13.1 2.6 0.42 11.0 0.3 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF1840) Pox_EPC_I2-L1 PF12575.8 ORF80524 - 0.099 12.9 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 Malate_DH PF12434.8 ORF80524 - 0.21 11.7 1.6 1.2 9.2 0.5 2.7 2 0 0 2 2 2 0 Malate dehydrogenase enzyme SPARC_Ca_bdg PF10591.9 ORF80524 - 0.33 11.3 2.1 6.4 7.1 0.5 2.5 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF80524 - 0.34 10.8 4.8 0.83 9.6 1.1 2.8 2 1 1 3 3 3 0 EF hand SRI PF08236.11 ORF80524 - 0.35 11.1 4.6 0.97 9.7 0.1 3.1 3 1 1 4 4 4 0 SRI (Set2 Rpb1 interacting) domain RNA_pol_Rpb4 PF03874.16 ORF80524 - 0.44 10.9 3.6 3.1 8.1 3.6 2.4 1 1 0 1 1 1 0 RNA polymerase Rpb4 DUF1456 PF07308.13 ORF80524 - 2.2 8.7 5.4 6.4 7.2 0.4 2.8 3 1 0 3 3 2 0 Protein of unknown function (DUF1456) ARGLU PF15346.6 ORF80114 - 0.017 15.0 2.9 0.019 14.8 2.9 1.2 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 Pkinase PF00069.25 ORF80114 - 0.096 12.0 0.3 0.15 11.4 0.0 1.4 2 0 0 2 2 2 0 Protein kinase domain DOT1 PF08123.13 ORF78538 - 6.8e-08 32.3 0.0 3.6e-06 26.7 0.0 2.1 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_2 PF00891.18 ORF78538 - 2.5e-05 23.7 0.0 3.3e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_11 PF08241.12 ORF78538 - 0.00032 21.3 0.0 0.00046 20.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF78538 - 0.00094 19.8 0.0 0.0015 19.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF78538 - 0.0013 18.2 0.0 0.0017 17.8 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_31 PF13847.6 ORF78538 - 0.0017 18.1 0.0 0.002 17.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF78538 - 0.045 14.5 0.0 0.064 14.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain 2OG-FeII_Oxy_5 PF13759.6 ORF76989 - 0.12 12.7 0.5 0.24 11.9 0.5 1.5 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase ATP-synt_DE_N PF02823.16 ORF7669 - 4.3e-23 81.0 0.0 7.5e-23 80.2 0.0 1.4 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATP-synt_DE PF00401.20 ORF7669 - 5.2e-07 29.8 5.7 5.2e-07 29.8 5.7 1.7 2 0 0 2 2 2 1 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DUF5547 PF17701.1 ORF7669 - 0.0036 17.2 0.1 0.0046 16.8 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5547) PMI_typeI PF01238.21 ORF75729 - 1.2e-37 130.0 1.1 1.2e-36 126.8 1.1 1.9 1 1 0 1 1 1 1 Phosphomannose isomerase type I DUF3015 PF11220.8 ORF75729 - 0.11 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3015) MORN PF02493.20 ORF74601 - 5.3e-12 44.9 18.6 2.2e-06 27.2 2.9 4.7 5 0 0 5 5 5 3 MORN repeat DUF1659 PF07872.11 ORF74601 - 0.12 12.1 1.8 0.21 11.3 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1659) DHO_dh PF01180.21 ORF73231 - 2.7e-27 95.7 0.0 3.4e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Alpha-mann_mid PF09261.11 ORF732 - 0.016 15.3 0.1 0.029 14.5 0.1 1.5 1 0 0 1 1 1 0 Alpha mannosidase middle domain RGS_DHEX PF18148.1 ORF72302 - 0.097 12.8 0.9 0.24 11.5 0.1 1.9 2 1 0 2 2 2 0 Regulator of G-protein signalling DHEX domain Lectin_N PF03954.14 ORF72302 - 0.14 11.9 2.5 0.075 12.8 0.5 1.6 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain CRAL_TRIO PF00650.20 ORF71000 - 1.9e-08 34.2 0.0 2.8e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF71000 - 0.14 12.3 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain UxuA PF03786.13 ORF70123 - 4.6e-70 236.2 0.3 5.2e-70 236.0 0.3 1.0 1 0 0 1 1 1 1 D-mannonate dehydratase (UxuA) Delta_lysin PF05372.11 ORF70123 - 0.0072 15.6 0.0 0.017 14.4 0.0 1.6 1 0 0 1 1 1 1 Delta lysin family AP_endonuc_2 PF01261.24 ORF70123 - 0.056 12.9 0.1 0.096 12.1 0.0 1.5 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel NPV_P10 PF05531.12 ORF69551 - 0.043 14.3 0.3 0.46 11.0 0.0 2.2 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein CcmH PF03918.14 ORF68869 - 0.068 12.5 0.1 0.1 11.9 0.1 1.2 1 0 0 1 1 1 0 Cytochrome C biogenesis protein Ezh2_MCSS PF18600.1 ORF68869 - 0.087 12.5 0.1 0.14 11.8 0.1 1.4 1 0 0 1 1 1 0 MCSS domain Metallophos PF00149.28 ORF68332 - 4e-09 37.3 0.1 6.6e-09 36.6 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks130.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks130.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks130.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks130.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HMGL-like PF00682.19 ORF63911 - 6.8e-27 94.7 0.1 7.7e-27 94.5 0.1 1.0 1 0 0 1 1 1 1 HMGL-like Metallophos_2 PF12850.7 ORF63727 - 3.9e-06 27.2 0.0 4.9e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 ORF63727 - 0.028 14.9 0.1 0.034 14.6 0.1 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase Phage_tail_NK PF16532.5 ORF62938 - 0.091 12.4 0.7 0.15 11.7 0.7 1.3 1 0 0 1 1 1 0 Sf6-type phage tail needle knob or tip of some Caudovirales Abhydrolase_1 PF00561.20 ORF62880 - 0.0017 18.1 0.1 0.0032 17.2 0.1 1.5 1 1 1 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF62880 - 0.0022 17.3 0.0 0.0041 16.4 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 DUF818 PF05677.12 ORF62880 - 0.062 12.2 0.1 0.071 12.0 0.1 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) BSP_II PF05432.11 ORF61606 - 0.13 11.9 9.8 0.2 11.3 9.8 1.3 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) DFF-C PF09033.10 ORF61606 - 0.67 9.8 0.0 0.67 9.8 0.0 2.1 2 0 0 2 2 2 0 DNA Fragmentation factor 45kDa, C terminal domain RRN3 PF05327.11 ORF61606 - 0.82 8.1 4.8 1 7.8 4.8 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 CDC45 PF02724.14 ORF61606 - 1.1 7.5 6.7 1.2 7.3 6.7 1.1 1 0 0 1 1 1 0 CDC45-like protein Methyltrans_RNA PF04452.14 ORF60270 - 1e-07 31.6 0.0 1.2e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 RNA methyltransferase EF-hand_6 PF13405.6 ORF59785 - 4.6e-09 35.5 0.2 7.4e-05 22.4 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF59785 - 2e-07 30.1 0.3 0.00022 20.5 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF59785 - 2.7e-07 30.9 0.0 5.8e-07 29.9 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF59785 - 6.6e-07 28.5 0.4 0.016 14.7 0.0 2.4 2 0 0 2 2 2 2 EF hand Not3 PF04065.15 ORF59785 - 0.0049 16.3 0.0 0.0062 16.0 0.0 1.1 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component Csm1_N PF18504.1 ORF59785 - 0.044 14.1 1.9 0.081 13.3 1.9 1.5 1 0 0 1 1 1 0 Csm1 N-terminal domain DivIC PF04977.15 ORF59785 - 0.046 13.5 2.1 0.083 12.7 2.1 1.4 1 0 0 1 1 1 0 Septum formation initiator EF-hand_8 PF13833.6 ORF59785 - 0.057 13.3 0.3 8.9 6.2 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain pair DUF5102 PF17104.5 ORF59785 - 0.12 12.4 1.3 0.33 11.0 1.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5102) DUF4140 PF13600.6 ORF59785 - 0.51 10.8 5.2 0.45 11.0 3.2 1.9 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) ANAPC1 PF12859.7 ORF59437 - 0.059 13.9 0.7 0.091 13.3 0.7 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 17kDa_Anti_2 PF16998.5 ORF58708 - 0.16 11.9 0.2 0.26 11.2 0.2 1.3 1 0 0 1 1 1 0 17 kDa outer membrane surface antigen DUF971 PF06155.12 ORF56931 - 0.11 13.1 0.1 0.18 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF971) MerE PF05052.12 ORF56931 - 0.37 10.7 2.4 11 6.0 0.2 2.5 1 1 1 2 2 2 0 MerE protein CSD PF00313.22 ORF56602 - 3.5e-05 23.6 0.4 5.6e-05 22.9 0.4 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain FAM176 PF14851.6 ORF56320 - 6.4 6.4 9.4 4.8 6.8 3.6 2.1 2 0 0 2 2 2 0 FAM176 family CoA_transf_3 PF02515.17 ORF55349 - 1.4e-29 103.4 0.0 1.5e-29 103.3 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III Adeno_VII PF03228.14 ORF54360 - 0.019 15.6 0.0 0.027 15.1 0.0 1.2 1 0 0 1 1 1 0 Adenoviral core protein VII DUF5305 PF17231.2 ORF53837 - 0.0011 18.4 0.2 0.0034 16.8 0.1 1.7 1 1 1 2 2 2 1 Family of unknown function (DUF5305) UPF0121 PF03661.13 ORF53837 - 0.059 12.8 0.1 0.078 12.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) Guanylate_cyc PF00211.20 ORF53072 - 2.3e-34 118.6 0.5 2.5e-34 118.5 0.5 1.0 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Herpes_UL69 PF05459.12 ORF53072 - 0.022 14.1 0.0 0.044 13.1 0.0 1.4 1 1 0 1 1 1 0 Herpesvirus transcriptional regulator family FHA PF00498.26 ORF52448 - 1.5e-10 41.2 1.0 2.5e-10 40.6 0.5 1.6 2 0 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 ORF52448 - 4.4e-06 26.9 0.0 7.7e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain MU2_FHA PF18221.1 ORF52448 - 0.033 14.2 0.1 0.058 13.4 0.1 1.5 1 1 0 1 1 1 0 Mutator 2 Fork head associated domain HCNGP PF07818.13 ORF50643 - 8.1e-14 52.0 1.1 8.1e-14 52.0 1.1 1.8 2 1 0 2 2 2 1 HCNGP-like protein CATSPERD PF15020.6 ORF49730 - 0.0036 15.7 0.1 0.0043 15.4 0.1 1.0 1 0 0 1 1 1 1 Cation channel sperm-associated protein subunit delta DUF4637 PF15470.6 ORF47811 - 0.072 12.8 0.1 0.17 11.6 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Asp PF00026.23 ORF4754 - 1.8e-06 27.6 0.0 2.2e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Phage_pRha PF09669.10 ORF47119 - 0.1 13.1 2.5 0.14 12.8 0.1 2.1 2 1 0 2 2 2 0 Phage regulatory protein Rha (Phage_pRha) DUF3416 PF11896.8 ORF4549 - 0.014 15.7 0.1 0.019 15.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3416) Adeno_E3_CR2 PF02439.15 ORF45336 - 0.011 15.5 0.4 0.011 15.5 0.4 1.8 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 TRIQK PF15168.6 ORF45336 - 1.1 9.2 7.6 0.44 10.5 2.1 2.5 2 1 1 3 3 3 0 Triple QxxK/R motif-containing protein family XK-related PF09815.9 ORF45336 - 2.2 7.3 6.1 4.8 6.1 6.1 1.5 1 1 0 1 1 1 0 XK-related protein FCD PF07729.12 ORF4479 - 7.3e-20 71.7 1.8 7.3e-20 71.7 1.8 1.4 2 0 0 2 2 2 1 FCD domain Remorin_C PF03763.13 ORF43725 - 0.014 15.3 0.8 0.014 15.3 0.8 2.1 1 1 1 2 2 2 0 Remorin, C-terminal region DUF3783 PF12646.7 ORF43725 - 0.066 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3783) TRIQK PF15168.6 ORF43725 - 1.2 9.1 3.8 0.94 9.4 1.7 1.9 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family CN_hydrolase PF00795.22 ORF43606 - 8.4e-26 90.9 0.0 9.5e-26 90.7 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Abhydro_lipase PF04083.16 ORF43211 - 5e-16 58.0 0.0 9.7e-16 57.1 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF43211 - 8.7e-10 38.7 0.1 1e-09 38.5 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold ATP13 PF12921.7 ORF43211 - 0.082 12.8 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ATPase expression DUF1682 PF07946.14 ORF42890 - 7.2e-07 28.7 0.0 1.2e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1682) DUF5305 PF17231.2 ORF42769 - 0.0011 18.4 0.2 0.0034 16.8 0.1 1.7 1 1 1 2 2 2 1 Family of unknown function (DUF5305) UPF0121 PF03661.13 ORF42769 - 0.059 12.8 0.1 0.078 12.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) Homeobox_KN PF05920.11 ORF41968 - 1.7e-16 59.8 0.3 3.1e-16 59.0 0.3 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF41968 - 1.8e-05 24.5 0.6 4e-05 23.4 0.3 1.7 2 0 0 2 2 2 1 Homeodomain RasGEF_N PF00618.20 ORF41968 - 0.039 14.2 0.9 0.071 13.3 0.9 1.6 1 0 0 1 1 1 0 RasGEF N-terminal motif Presenilin PF01080.17 ORF41968 - 5.8 5.6 6.2 5.4 5.7 6.2 1.2 1 0 0 1 1 1 0 Presenilin DAP PF15228.6 ORF41968 - 7.6 7.8 7.5 12 7.1 5.2 2.3 2 1 0 2 2 2 0 Death-associated protein SprT-like PF10263.9 ORF41735 - 2.8e-16 59.4 0.1 3.4e-16 59.1 0.1 1.3 1 0 0 1 1 1 1 SprT-like family Zn_ribbon_SprT PF17283.2 ORF41735 - 1.5e-09 37.6 4.7 2.7e-09 36.8 4.7 1.5 1 0 0 1 1 1 1 SprT-like zinc ribbon domain DUF45 PF01863.17 ORF41735 - 0.00014 22.0 0.1 0.00067 19.8 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function DUF45 DUF3267 PF11667.8 ORF41735 - 0.049 13.9 0.1 0.073 13.4 0.1 1.4 1 0 0 1 1 1 0 Putative zincin peptidase Desulfoferrod_N PF06397.12 ORF41735 - 0.19 11.4 0.4 0.19 11.4 0.4 1.6 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain XK-related PF09815.9 ORF405 - 0.42 9.6 3.0 0.62 9.1 3.0 1.2 1 0 0 1 1 1 0 XK-related protein Amido_AtzD_TrzD PF09663.10 ORF39880 - 0.056 12.5 0.0 0.066 12.2 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) RSRP PF17069.5 ORF38902 - 8.2 5.9 18.3 5.1 6.6 9.8 2.2 2 0 0 2 2 2 0 Arginine/Serine-Rich protein 1 AMPK1_CBM PF16561.5 ORF38901 - 0.0059 16.8 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase DUF2838 PF10998.8 ORF38684 - 2.7e-08 34.0 4.8 3.7e-08 33.6 4.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) Jnk-SapK_ap_N PF09744.9 ORF36667 - 0.082 13.1 0.5 0.1 12.8 0.5 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF305 PF03713.13 ORF36667 - 0.1 12.7 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF305) efThoc1 PF11957.8 ORF35438 - 8.3e-15 54.4 3.7 1.2e-14 53.9 3.7 1.3 1 0 0 1 1 1 1 THO complex subunit 1 transcription elongation factor AGS_C PF18134.1 ORF35438 - 0.029 14.4 0.3 0.04 13.9 0.3 1.2 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain Sugar_tr PF00083.24 ORF35152 - 5.4e-37 127.7 0.3 6.3e-37 127.5 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF35152 - 2e-13 50.0 0.9 2e-13 50.0 0.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3165 PF11364.8 ORF35152 - 0.049 14.0 0.6 0.1 13.0 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3165) Phage_holin_3_2 PF04550.12 ORF35152 - 0.32 11.6 5.1 0.29 11.7 3.3 1.9 1 1 1 2 2 2 0 Phage holin family 2 MAP17 PF15807.5 ORF35152 - 0.52 10.5 0.0 0.52 10.5 0.0 1.7 2 0 0 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF1077 PF06417.12 ORF33303 - 2.5e-27 95.2 6.3 3.6e-27 94.7 6.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1077) EF-hand_1 PF00036.32 ORF31340 - 6.4e-28 94.2 15.5 7.2e-09 34.6 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF31340 - 9.8e-25 86.8 10.0 4.2e-12 46.3 4.3 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF31340 - 2.6e-21 73.7 9.3 1.1e-08 34.3 0.1 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF31340 - 5.9e-18 64.5 12.8 3e-09 36.6 1.1 3.7 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF31340 - 6.4e-15 55.2 0.2 2.9e-08 33.9 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF31340 - 2.7e-08 32.9 9.1 1.5e-05 24.3 0.3 4.2 4 0 0 4 4 4 2 EF hand EF-hand_14 PF17959.1 ORF31340 - 0.0024 18.2 1.4 0.67 10.3 0.2 2.5 1 1 2 3 3 3 1 EF-hand domain EF-hand_4 PF12763.7 ORF31340 - 0.0028 17.6 6.6 0.44 10.5 0.1 3.3 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF31340 - 0.0033 17.7 1.0 0.95 9.8 0.0 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region DUF3349 PF11829.8 ORF31340 - 0.0056 17.4 1.7 0.94 10.3 0.0 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF3349) UPF0154 PF03672.13 ORF31340 - 0.01 15.8 0.0 1.9 8.6 0.0 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 ORF31340 - 0.012 15.7 3.8 1.4 9.2 0.2 2.8 2 1 1 3 3 3 0 Dockerin type I domain MgtE_N PF03448.17 ORF31340 - 0.042 14.5 4.3 0.047 14.3 0.7 2.5 3 0 0 3 3 3 0 MgtE intracellular N domain SurA_N_3 PF13624.6 ORF31340 - 0.048 13.5 1.3 2.6 7.8 0.3 2.2 1 1 1 2 2 2 0 SurA N-terminal domain SurA_N_2 PF13623.6 ORF31340 - 0.051 13.4 0.8 1.6 8.6 0.2 2.4 2 1 0 2 2 2 0 SurA N-terminal domain SUB1_ProdP9 PF18213.1 ORF31340 - 0.069 13.0 2.1 0.086 12.7 0.4 2.0 2 0 0 2 2 2 0 SUB1 protease Prodomain ProdP9 DUF1296 PF06972.11 ORF31340 - 0.071 13.3 1.4 0.2 11.8 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1296) TerB PF05099.13 ORF31340 - 0.086 12.8 3.4 2.5 8.0 0.0 2.7 1 1 2 3 3 3 0 Tellurite resistance protein TerB FlgD PF03963.14 ORF31340 - 0.088 13.1 0.0 0.26 11.6 0.0 1.9 2 1 0 2 2 2 0 Flagellar hook capping protein - N-terminal region Acetyltransf_11 PF13720.6 ORF31340 - 0.12 12.9 0.4 2.1 8.9 0.0 2.3 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF3008 PF11450.8 ORF31340 - 0.12 12.6 0.6 0.23 11.6 0.2 1.7 2 0 0 2 2 1 0 Protein of unknwon function (DUF3008) UPF0242 PF06785.11 ORF31284 - 0.038 14.1 12.1 0.039 14.0 11.5 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3328 PF11807.8 ORF31284 - 0.053 13.3 0.0 0.073 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) SLC12 PF03522.15 ORF31284 - 0.059 12.4 8.6 0.067 12.2 8.6 1.1 1 0 0 1 1 1 0 Solute carrier family 12 SID-1_RNA_chan PF13965.6 ORF31284 - 0.17 10.3 2.4 0.19 10.1 2.4 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Neur_chan_memb PF02932.16 ORF31284 - 0.3 11.1 2.2 0.37 10.8 2.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region TT_ORF1 PF02956.14 ORF31284 - 1.1 7.8 4.8 1.3 7.6 4.8 1.1 1 0 0 1 1 1 0 TT viral orf 1 CDC45 PF02724.14 ORF31284 - 1.3 7.2 24.9 1.6 7.0 24.9 1.1 1 0 0 1 1 1 0 CDC45-like protein MDM10 PF12519.8 ORF31284 - 1.3 7.8 8.7 1.5 7.6 8.7 1.2 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 Hid1 PF12722.7 ORF31284 - 2 6.4 11.1 2.3 6.3 11.1 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Nop14 PF04147.12 ORF31284 - 4.3 5.4 30.2 5.4 5.1 30.2 1.1 1 0 0 1 1 1 0 Nop14-like family UQ_con PF00179.26 ORF31170 - 0.0016 18.1 0.0 0.0023 17.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF2501 PF10696.9 ORF29600 - 4e-27 94.3 6.2 4e-27 94.3 6.2 1.8 2 1 0 2 2 2 1 Protein of unknown function (DUF2501) Alkyl_sulf_dimr PF14863.6 ORF29600 - 0.14 12.6 1.5 0.26 11.7 0.7 1.6 1 1 1 2 2 2 0 Alkyl sulfatase dimerisation DUF5305 PF17231.2 ORF28982 - 0.0011 18.4 0.2 0.0034 16.8 0.1 1.7 1 1 1 2 2 2 1 Family of unknown function (DUF5305) UPF0121 PF03661.13 ORF28982 - 0.059 12.8 0.1 0.078 12.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) Prion PF00377.18 ORF28296 - 0.19 11.5 0.0 0.33 10.8 0.0 1.3 1 0 0 1 1 1 0 Prion/Doppel alpha-helical domain ADK PF00406.22 ORF28109 - 8.9e-42 142.7 0.2 1e-41 142.5 0.2 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF28109 - 1.2e-35 122.9 0.3 1.4e-35 122.7 0.3 1.0 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF28109 - 1.3e-09 38.7 0.1 1.6e-09 38.4 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF28109 - 1.1e-08 35.3 0.0 1.3e-08 35.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF28109 - 0.00024 20.8 0.4 0.062 13.0 0.1 2.1 2 0 0 2 2 2 2 Thymidylate kinase AAA_19 PF13245.6 ORF28109 - 0.019 15.3 0.1 0.024 15.0 0.1 1.5 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF28109 - 0.067 12.5 0.0 0.083 12.2 0.0 1.3 1 1 0 1 1 1 0 Zeta toxin NTPase_1 PF03266.15 ORF28109 - 0.079 12.9 0.2 0.24 11.3 0.1 1.6 1 1 1 2 2 2 0 NTPase Cytidylate_kin PF02224.18 ORF28109 - 0.11 12.2 0.0 0.3 10.8 0.0 1.6 1 1 0 2 2 2 0 Cytidylate kinase UTRA PF07702.13 ORF27823 - 3.3e-32 111.3 0.0 3.7e-32 111.1 0.0 1.0 1 0 0 1 1 1 1 UTRA domain ABC_tran PF00005.27 ORF26399 - 2.2e-09 38.0 0.1 4.6e-09 36.9 0.1 1.6 1 1 0 1 1 1 1 ABC transporter Dynamin_N PF00350.23 ORF26399 - 0.00012 22.1 0.8 0.00034 20.7 0.1 1.9 2 0 0 2 2 2 1 Dynamin family AAA_23 PF13476.6 ORF26399 - 0.00029 21.4 0.2 0.00051 20.6 0.1 1.6 1 1 1 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF26399 - 0.0006 19.5 0.1 0.0011 18.7 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain T2SSE PF00437.20 ORF26399 - 0.0025 16.9 0.0 0.0027 16.8 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 ORF26399 - 0.0037 17.5 0.0 0.0054 17.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 ORF26399 - 0.004 17.1 0.1 0.0058 16.6 0.1 1.2 1 0 0 1 1 1 1 NACHT domain NB-ARC PF00931.22 ORF26399 - 0.0046 16.2 0.0 0.006 15.8 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain RsgA_GTPase PF03193.16 ORF26399 - 0.0064 16.4 0.3 0.0092 15.9 0.3 1.2 1 0 0 1 1 1 1 RsgA GTPase TsaE PF02367.17 ORF26399 - 0.0069 16.4 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE MMR_HSR1 PF01926.23 ORF26399 - 0.0073 16.4 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Spore_IV_A PF09547.10 ORF26399 - 0.0088 15.0 0.0 0.016 14.2 0.0 1.4 2 0 0 2 2 2 1 Stage IV sporulation protein A (spore_IV_A) AAA_15 PF13175.6 ORF26399 - 0.01 15.6 1.6 0.01 15.6 1.6 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_27 PF13514.6 ORF26399 - 0.018 14.7 0.0 0.029 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF26399 - 0.018 15.1 0.8 0.028 14.5 0.6 1.4 1 1 0 1 1 1 0 Helicase HerA, central domain SMC_N PF02463.19 ORF26399 - 0.02 14.3 0.1 0.029 13.8 0.1 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF26399 - 0.022 14.6 0.5 0.034 14.0 0.1 1.5 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Zeta_toxin PF06414.12 ORF26399 - 0.023 14.0 0.0 0.034 13.4 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin FtsK_SpoIIIE PF01580.18 ORF26399 - 0.028 13.8 0.0 0.044 13.1 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family ATP_bind_1 PF03029.17 ORF26399 - 0.033 14.0 0.1 0.05 13.4 0.1 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 ORF26399 - 0.045 14.2 0.0 0.073 13.5 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 ORF26399 - 0.049 14.2 0.3 0.11 13.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF26399 - 0.054 13.7 0.1 0.091 12.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF26399 - 0.06 13.7 0.0 0.078 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain NTPase_1 PF03266.15 ORF26399 - 0.064 13.2 0.2 0.13 12.1 0.2 1.6 2 1 0 2 2 1 0 NTPase dNK PF01712.19 ORF26399 - 0.12 12.2 0.1 0.21 11.4 0.1 1.4 1 0 0 1 1 1 0 Deoxynucleoside kinase DTHCT PF08070.11 ORF25731 - 7.4 7.4 59.2 0.15 12.8 24.1 3.2 1 1 2 3 3 3 0 DTHCT (NUC029) region Rnf-Nqr PF02508.14 ORF24881 - 7.9e-50 169.2 18.0 8.7e-50 169.1 18.0 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein DHHC PF01529.20 ORF24141 - 0.087 12.9 2.4 0.073 13.2 1.3 1.5 2 0 0 2 2 2 0 DHHC palmitoyltransferase CinA PF02464.17 ORF23521 - 6.1e-61 204.5 2.5 7e-61 204.3 2.5 1.0 1 0 0 1 1 1 1 Competence-damaged protein SHIPPO-rpt PF07004.12 ORF2163 - 0.00097 19.9 13.8 0.013 16.4 2.7 3.9 3 2 0 3 3 3 2 Sperm-tail PG-rich repeat SHIPPO-rpt PF07004.12 ORF21226 - 0.00097 19.9 13.8 0.013 16.4 2.7 3.9 3 2 0 3 3 3 2 Sperm-tail PG-rich repeat Nucleoporin_FG2 PF15967.5 ORF19755 - 0.059 11.9 7.8 0.064 11.8 7.8 1.1 1 0 0 1 1 1 0 Nucleoporin FG repeated region efThoc1 PF11957.8 ORF19650 - 8.3e-15 54.4 3.7 1.2e-14 53.9 3.7 1.3 1 0 0 1 1 1 1 THO complex subunit 1 transcription elongation factor AGS_C PF18134.1 ORF19650 - 0.029 14.4 0.3 0.04 13.9 0.3 1.2 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain POTRA_TamA_1 PF17243.2 ORF17947 - 0.2 11.8 2.1 0.23 11.6 0.1 2.2 2 1 0 2 2 2 0 POTRA domain TamA domain 1 EF-hand_1 PF00036.32 ORF17663 - 1e-29 99.8 12.7 3.5e-09 35.5 1.2 4.1 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF17663 - 6.8e-28 96.9 7.2 2e-13 50.6 0.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF17663 - 2.5e-22 78.5 10.5 6.6e-12 45.1 0.9 3.7 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF17663 - 1e-20 71.8 7.1 1.9e-08 33.5 0.1 4.2 4 1 0 4 4 4 3 EF-hand domain EF-hand_9 PF14658.6 ORF17663 - 6.9e-16 58.3 0.1 7.3e-07 29.4 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF17663 - 9.9e-12 43.8 10.9 1.5e-05 24.2 0.3 3.8 4 0 0 4 4 4 3 EF hand EF-hand_4 PF12763.7 ORF17663 - 2.4e-05 24.2 3.0 0.28 11.2 0.1 3.2 1 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF17663 - 0.00019 21.7 0.6 0.47 10.8 0.0 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region SurA_N_3 PF13624.6 ORF17663 - 0.00053 19.8 0.8 0.61 9.9 0.1 2.2 1 1 1 2 2 2 2 SurA N-terminal domain EF-hand_14 PF17959.1 ORF17663 - 0.0019 18.5 0.9 1.1 9.7 0.5 2.8 1 1 1 2 2 2 1 EF-hand domain SurA_N_2 PF13623.6 ORF17663 - 0.0059 16.5 1.4 1.5 8.6 0.2 2.5 1 1 1 2 2 2 2 SurA N-terminal domain FlgD PF03963.14 ORF17663 - 0.0072 16.6 0.0 0.016 15.5 0.0 1.7 2 1 0 2 2 1 1 Flagellar hook capping protein - N-terminal region TerB PF05099.13 ORF17663 - 0.029 14.3 4.3 0.13 12.2 0.1 2.7 1 1 2 3 3 3 0 Tellurite resistance protein TerB MgtE_N PF03448.17 ORF17663 - 0.039 14.6 0.8 0.039 14.6 0.8 2.4 3 0 0 3 3 2 0 MgtE intracellular N domain Toprim_2 PF13155.6 ORF17663 - 0.046 14.1 0.9 2.3 8.7 0.1 2.4 1 1 1 2 2 2 0 Toprim-like DUF1296 PF06972.11 ORF17663 - 0.056 13.6 1.1 0.24 11.6 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1296) SUB1_ProdP9 PF18213.1 ORF17663 - 0.056 13.3 0.3 0.099 12.5 0.3 1.5 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 Dockerin_1 PF00404.18 ORF17663 - 0.058 13.6 0.7 1.9 8.7 0.1 2.5 2 1 1 3 3 3 0 Dockerin type I domain Acetyltransf_11 PF13720.6 ORF17663 - 0.066 13.7 0.8 0.95 10.0 0.1 2.4 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF3008 PF11450.8 ORF17663 - 0.079 13.1 1.4 0.16 12.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknwon function (DUF3008) Adenine_glyco PF03352.13 ORF17663 - 0.095 12.5 0.3 0.22 11.2 0.2 1.6 1 1 1 2 2 2 0 Methyladenine glycosylase UPF0154 PF03672.13 ORF17663 - 0.1 12.7 0.6 14 5.8 0.0 2.7 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0154) DUF21 PF01595.20 ORF17663 - 0.48 10.1 1.2 2.9 7.6 0.5 2.1 2 0 0 2 2 2 0 Cyclin M transmembrane N-terminal domain Gp-FAR-1 PF05823.12 ORF17663 - 0.57 10.5 4.6 1.3 9.4 0.3 2.5 2 1 0 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) HATPase_c PF02518.26 ORF17011 - 3.9e-13 49.9 0.2 6.2e-13 49.2 0.2 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF17011 - 0.012 15.4 0.0 0.018 14.8 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF17011 - 0.091 12.8 0.3 0.19 11.8 0.3 1.6 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain Piwi PF02171.17 ORF16691 - 2e-27 96.3 0.0 2.3e-27 96.0 0.0 1.0 1 0 0 1 1 1 1 Piwi domain Sugar_tr PF00083.24 ORF15811 - 1.5e-27 96.6 0.6 1.7e-27 96.4 0.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF15811 - 5.7e-08 32.1 0.6 7.1e-08 31.8 0.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1824 PF08854.10 ORF112385 - 8.2e-14 51.6 0.1 4.4e-08 33.1 0.0 2.3 2 1 0 2 2 2 2 Domain of unknown function (DUF1824) GRIP PF01465.20 ORF111474 - 0.0029 17.5 0.0 0.0059 16.5 0.0 1.5 1 0 0 1 1 1 1 GRIP domain DUF2384 PF09722.10 ORF11010 - 0.064 13.3 0.1 0.12 12.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2384) RNA_pol_Rpb8 PF03870.15 ORF110010 - 5.5e-31 107.6 1.7 6.9e-31 107.3 1.7 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb8 RNA_pol_RpbG PF16992.5 ORF110010 - 9.6e-07 28.9 1.1 0.00021 21.3 1.1 2.3 1 1 0 1 1 1 1 DNA-directed RNA polymerase, subunit G Lipocalin_4 PF13648.6 ORF110010 - 0.19 12.7 2.6 0.45 11.5 2.6 1.7 1 1 0 1 1 1 0 Lipocalin-like domain HATPase_c PF02518.26 ORF106342 - 1.6e-11 44.7 0.3 1.2e-10 41.8 0.3 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF106342 - 0.0029 17.6 0.1 0.0044 17.0 0.1 1.5 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 ORF106342 - 0.0093 15.8 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Phage_lysozyme PF00959.19 ORF106001 - 6.6e-33 113.4 0.2 8.2e-33 113.1 0.2 1.1 1 0 0 1 1 1 1 Phage lysozyme LIDHydrolase PF10230.9 ORF105819 - 0.0039 16.8 1.1 0.005 16.4 0.8 1.3 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase His_Phos_1 PF00300.22 ORF105819 - 0.0049 16.6 0.0 0.0064 16.2 0.0 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DNA_pol3_delta2 PF13177.6 ORF105819 - 0.015 15.1 1.0 0.02 14.7 1.0 1.2 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Swm2 PF17083.5 ORF105819 - 0.017 15.2 1.1 0.037 14.0 1.1 1.6 1 1 0 1 1 1 0 Nucleolar protein Swm2 DUF2433 PF10360.9 ORF105819 - 0.027 14.6 0.1 0.039 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) PGAP1 PF07819.13 ORF105819 - 0.17 11.6 1.9 0.32 10.7 0.7 1.8 2 0 0 2 2 2 0 PGAP1-like protein Transcrip_reg PF01709.20 ORF102540 - 1.4e-59 201.4 0.1 1.6e-59 201.3 0.1 1.0 1 0 0 1 1 1 1 Transcriptional regulator efThoc1 PF11957.8 ORF102184 - 8.3e-15 54.4 3.7 1.2e-14 53.9 3.7 1.3 1 0 0 1 1 1 1 THO complex subunit 1 transcription elongation factor AGS_C PF18134.1 ORF102184 - 0.029 14.4 0.3 0.04 13.9 0.3 1.2 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain DUF1097 PF06496.11 ORF100627 - 1.4e-27 96.6 30.6 1.6e-27 96.4 30.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1097) DUF1072 PF06380.11 ORF100627 - 0.27 11.1 2.3 3.8 7.5 0.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) SNN_transmemb PF09049.10 ORF100123 - 0.08 12.9 1.2 0.16 11.9 1.2 1.4 1 0 0 1 1 1 0 Stannin transmembrane DUF2207 PF09972.9 ORF100123 - 3.7 6.2 4.7 5.7 5.6 4.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Keratin_assoc PF09775.9 ORF100123 - 8.2 6.1 11.6 0.81 9.3 5.9 1.9 1 1 0 2 2 2 0 Keratinocyte-associated protein 2 HECT PF00632.25 NODE_41699_length_490_cov_134.131868_g34125_i0reverse_frame_1 - 8.4e-22 78.0 0.0 1.1e-21 77.7 0.0 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Pyr_redox_2 PF07992.14 NODE_41675_length_491_cov_2.296053_g34105_i0reverse_frame_1 - 1.4e-07 31.0 0.0 1.7e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 NODE_41675_length_491_cov_2.296053_g34105_i0reverse_frame_1 - 0.067 13.4 0.0 0.19 12.0 0.0 1.7 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Abhydrolase_1 PF00561.20 NODE_41675_length_491_cov_2.296053_g34105_i0reverse_frame_1 - 0.11 12.1 0.3 0.13 11.9 0.3 1.4 1 1 0 1 1 1 0 alpha/beta hydrolase fold DUF2457 PF10446.9 NODE_41674_length_491_cov_2.307018_g34104_i0reverse_frame_1 - 0.011 14.9 4.0 0.013 14.7 4.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) YopE_N PF09020.10 NODE_41674_length_491_cov_2.307018_g34104_i0reverse_frame_1 - 0.22 11.8 1.4 0.27 11.5 0.8 1.4 1 1 0 1 1 1 0 YopE, N terminal LptC PF06835.13 NODE_41671_length_491_cov_3.989035_g34101_i0forward_frame_1 - 0.065 12.8 0.0 0.084 12.4 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide-assembly, LptC-related MtrA PF04208.14 NODE_41671_length_491_cov_3.989035_g34101_i0forward_frame_1 - 0.081 12.6 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit A MORN PF02493.20 NODE_41659_length_491_cov_76.991228_g34089_i0forward_frame_1 - 6.6e-06 25.7 8.6 0.0032 17.3 0.4 4.1 4 1 0 4 4 4 3 MORN repeat DUF4630 PF15443.6 NODE_41644_length_491_cov_137.445175_g34074_i0forward_frame_1 - 0.29 11.3 2.9 0.4 10.8 0.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4630) Spike_torovirin PF17072.5 NODE_41637_length_491_cov_253.769737_g34067_i0forward_frame_1 - 0.14 9.2 0.3 0.17 9.0 0.3 1.0 1 0 0 1 1 1 0 Torovirinae spike glycoprotein TMEM223 PF14640.6 NODE_41622_length_492_cov_2.218818_g34055_i0forward_frame_1 - 0.021 15.0 1.8 0.043 14.0 1.8 1.5 1 1 0 1 1 1 0 Transmembrane protein 223 DMPK_coil PF08826.10 NODE_41620_length_492_cov_2.448578_g34053_i0forward_frame_1 - 0.062 13.4 0.4 0.18 12.0 0.2 1.8 2 0 0 2 2 2 0 DMPK coiled coil domain like Ala_racemase_N PF01168.20 NODE_41611_length_492_cov_3.155361_g34044_i0reverse_frame_1 - 6.5e-12 45.6 0.0 8.3e-12 45.2 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Orthopox_B11R PF07033.11 NODE_41611_length_492_cov_3.155361_g34044_i0forward_frame_1 - 0.0057 16.4 0.0 0.0081 15.9 0.0 1.2 1 0 0 1 1 1 1 Orthopoxvirus B11R protein Ribosomal_L14 PF00238.19 NODE_41611_length_492_cov_3.155361_g34044_i0forward_frame_1 - 0.15 12.2 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L14p/L23e DUF5497 PF17601.2 NODE_41593_length_492_cov_62.485777_g34026_i0reverse_frame_1 - 0.071 13.4 1.3 0.44 10.9 0.1 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5497) NinF PF05810.12 NODE_41569_length_492_cov_168.393873_g34002_i0reverse_frame_1 - 0.0059 16.4 0.0 0.01 15.7 0.0 1.4 1 0 0 1 1 1 1 NinF protein RCC1_2 PF13540.6 NODE_41569_length_492_cov_168.393873_g34002_i0forward_frame_1 - 2.1e-05 24.2 10.4 0.37 10.7 0.1 3.7 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat CbtB PF09489.10 NODE_41550_length_493_cov_2.061135_g33987_i0forward_frame_2 - 0.04 14.0 0.1 0.071 13.2 0.1 1.4 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtB) Sld7_N PF18636.1 NODE_41540_length_493_cov_3.681223_g33977_i0reverse_frame_2 - 0.039 14.3 0.4 0.071 13.5 0.1 1.6 2 0 0 2 2 2 0 Mitochondrial morphogenesis protein SLD7 N-terminal domain TSNAXIP1_N PF15739.5 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 0.012 16.0 5.8 0.012 16.0 5.8 1.7 2 0 0 2 2 2 0 Translin-associated factor X-interacting N-terminus HAUS-augmin3 PF14932.6 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 0.083 12.5 9.6 0.11 12.1 9.6 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 GIT_CC PF16559.5 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 0.095 12.6 3.8 0.56 10.1 1.1 2.6 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Mt_ATP-synt_B PF05405.14 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 0.9 9.1 9.6 0.12 12.0 4.0 2.0 2 0 0 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) NRBF2 PF08961.10 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 1.3 8.6 15.5 0.37 10.4 7.3 2.1 1 1 1 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator FAM76 PF16046.5 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 2.7 7.3 11.7 4.3 6.6 11.7 1.3 1 1 0 1 1 1 0 FAM76 protein zf-C4H2 PF10146.9 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 3.8 7.8 14.8 1.9 8.8 12.2 1.7 1 1 1 2 2 2 0 Zinc finger-containing protein DUF4407 PF14362.6 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 6.6 6.0 6.9 8.3 5.7 6.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) LON_substr_bdg PF02190.16 NODE_41531_length_493_cov_87.131004_g33968_i0reverse_frame_3 - 0.0033 17.3 0.0 0.0045 16.9 0.0 1.2 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain Peptidase_S49_N PF08496.10 NODE_41523_length_493_cov_147.978166_g33960_i0forward_frame_3 - 1.6 8.8 5.8 10 6.2 0.1 2.1 1 1 1 2 2 2 0 Peptidase family S49 N-terminal NUDIX_4 PF14815.6 NODE_41520_length_493_cov_170.379913_g33957_i0forward_frame_2 - 0.4 10.7 4.0 0.26 11.3 1.9 1.8 2 1 0 2 2 2 0 NUDIX domain HypA PF01155.19 NODE_41519_length_493_cov_173.853712_g33956_i0reverse_frame_2 - 0.094 12.7 0.5 0.14 12.2 0.5 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubella_E2 PF05749.11 NODE_41519_length_493_cov_173.853712_g33956_i0forward_frame_2 - 0.0017 17.9 0.1 0.0023 17.5 0.1 1.2 1 0 0 1 1 1 1 Rubella membrane glycoprotein E2 Secretogranin_V PF05281.11 NODE_41517_length_493_cov_199.052402_g33954_i0reverse_frame_3 - 0.029 14.0 0.0 0.037 13.6 0.0 1.1 1 0 0 1 1 1 0 Neuroendocrine protein 7B2 precursor (Secretogranin V) Radical_SAM PF04055.21 NODE_41496_length_494_cov_1.671024_g33938_i0forward_frame_2 - 3.2e-07 30.9 0.0 4.5e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Bactofilin PF04519.13 NODE_41487_length_494_cov_2.904139_g33929_i0reverse_frame_3 - 0.00025 21.3 3.7 0.00063 20.0 2.3 2.1 1 1 1 2 2 2 1 Polymer-forming cytoskeletal Hexapep PF00132.24 NODE_41487_length_494_cov_2.904139_g33929_i0reverse_frame_3 - 0.00079 19.1 7.4 0.082 12.7 0.8 3.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) YvfG PF09628.10 NODE_41485_length_494_cov_2.947712_g33927_i0reverse_frame_3 - 0.073 13.4 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 YvfG protein DUF29 PF01724.16 NODE_41485_length_494_cov_2.947712_g33927_i0forward_frame_2 - 0.025 14.8 0.4 0.047 13.9 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function DUF29 Arc_PepC_II PF06847.11 NODE_41485_length_494_cov_2.947712_g33927_i0forward_frame_2 - 0.057 13.9 4.1 0.14 12.7 1.2 2.1 1 1 1 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II HIP1_clath_bdg PF16515.5 NODE_41485_length_494_cov_2.947712_g33927_i0forward_frame_2 - 0.87 10.2 5.5 9.9 6.9 2.0 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 FAM184 PF15665.5 NODE_41485_length_494_cov_2.947712_g33927_i0forward_frame_2 - 1.6 8.4 10.1 4.2 7.1 0.9 2.0 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B TMEM223 PF14640.6 NODE_41483_length_494_cov_3.572985_g33925_i0forward_frame_3 - 0.046 13.9 1.7 0.062 13.5 1.7 1.2 1 0 0 1 1 1 0 Transmembrane protein 223 Lyase_1 PF00206.20 NODE_41483_length_494_cov_3.572985_g33925_i0forward_frame_2 - 2e-59 201.5 0.1 2.2e-59 201.4 0.1 1.0 1 0 0 1 1 1 1 Lyase Peptidase_M26_C PF07580.14 NODE_41483_length_494_cov_3.572985_g33925_i0forward_frame_2 - 0.25 9.8 0.0 0.32 9.4 0.0 1.1 1 0 0 1 1 1 0 M26 IgA1-specific Metallo-endopeptidase C-terminal region PseudoU_synth_2 PF00849.22 NODE_41482_length_494_cov_3.956427_g33924_i0reverse_frame_2 - 5.2e-23 81.9 0.0 6.3e-23 81.6 0.0 1.0 1 0 0 1 1 1 1 RNA pseudouridylate synthase PIH1_CS PF18201.1 NODE_41481_length_494_cov_6.420479_g33923_i0reverse_frame_3 - 1.8e-15 57.1 0.1 2.5e-15 56.7 0.1 1.2 1 0 0 1 1 1 1 PIH1 CS-like domain CbiQ PF02361.16 NODE_41475_length_494_cov_61.444444_g33917_i0forward_frame_2 - 0.95 9.0 4.5 1.7 8.2 4.5 1.7 1 1 0 1 1 1 0 Cobalt transport protein DUF3256 PF11644.8 NODE_41474_length_494_cov_61.464052_g33916_i0reverse_frame_3 - 0.091 12.2 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3256) HypA PF01155.19 NODE_41474_length_494_cov_61.464052_g33916_i0reverse_frame_2 - 6 6.9 5.7 19 5.4 5.7 1.7 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Mito_fiss_reg PF05308.11 NODE_41473_length_494_cov_62.355120_g33915_i0reverse_frame_3 - 0.37 10.8 4.2 0.51 10.4 4.2 1.3 1 1 0 1 1 1 0 Mitochondrial fission regulator DUF4680 PF15730.5 NODE_41451_length_494_cov_1310.442266_g33893_i0forward_frame_2 - 0.11 12.8 1.2 0.2 12.0 1.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4680) Spc7 PF08317.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 8.3e-06 24.9 16.0 8.3e-06 24.9 16.0 2.0 1 1 1 2 2 2 1 Spc7 kinetochore protein DUF745 PF05335.13 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 8.7e-06 25.6 13.0 1.1e-05 25.3 13.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF745) FliJ PF02050.16 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.0026 18.0 2.4 1.1 9.4 1.0 2.2 1 1 1 2 2 2 2 Flagellar FliJ protein OEP PF02321.18 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.0034 17.2 1.1 0.0034 17.2 1.1 2.1 1 1 2 3 3 3 2 Outer membrane efflux protein APG17 PF04108.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.0051 16.0 12.7 0.0064 15.7 12.7 1.2 1 0 0 1 1 1 1 Autophagy protein Apg17 TPR_MLP1_2 PF07926.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.0088 16.1 25.2 0.0099 15.9 5.2 3.0 1 1 2 3 3 3 2 TPR/MLP1/MLP2-like protein ATG16 PF08614.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.014 15.7 24.2 0.017 15.4 24.2 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF812 PF05667.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.017 14.0 19.8 0.021 13.7 19.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF5082 PF16888.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.019 15.3 17.7 0.34 11.2 9.7 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) Exonuc_VII_L PF02601.15 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.035 13.7 12.4 0.043 13.4 12.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit TarH PF02203.15 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.073 13.0 9.6 0.29 11.0 6.5 2.1 1 1 1 2 2 2 0 Tar ligand binding domain homologue HIP1_clath_bdg PF16515.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.081 13.5 15.8 0.73 10.5 8.8 2.4 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 GAS PF13851.6 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.11 11.8 21.4 0.2 11.0 15.4 2.2 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Fez1 PF06818.15 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.12 12.8 21.9 0.96 9.9 8.7 2.0 1 1 1 2 2 2 0 Fez1 WEMBL PF05701.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.13 11.0 19.1 0.27 9.9 19.1 1.5 1 1 0 1 1 1 0 Weak chloroplast movement under blue light PRKG1_interact PF15898.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.15 13.0 19.3 0.046 14.6 13.4 2.3 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DUF3584 PF12128.8 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.17 9.4 17.6 0.14 9.6 16.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) HrpB7 PF09486.10 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.3 11.5 7.0 0.53 10.7 7.0 1.4 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) DUF3552 PF12072.8 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.35 10.2 19.3 1.5 8.2 12.2 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) PspA_IM30 PF04012.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.55 9.8 14.1 0.42 10.2 8.7 2.4 1 1 1 2 2 2 0 PspA/IM30 family DUF4200 PF13863.6 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.59 10.5 17.9 0.27 11.6 12.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) APG6_N PF17675.1 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.89 10.1 23.3 9.2 6.8 23.3 2.0 1 1 0 1 1 1 0 Apg6 coiled-coil region Sec8_exocyst PF04048.14 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.98 9.3 16.5 1.7 8.5 10.6 3.0 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain DUF3450 PF11932.8 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 1.1 8.5 15.6 1.5 8.1 10.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) ZapB PF06005.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 1.3 9.5 19.5 2.6 8.5 7.9 3.2 1 1 2 3 3 3 0 Cell division protein ZapB Flagellin_C PF00700.21 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 2 8.9 11.4 2.5 8.5 1.2 2.9 1 1 1 2 2 2 0 Bacterial flagellin C-terminal helical region DUF2203 PF09969.9 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 2.1 9.1 9.0 1.1 10.0 0.8 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 2.6 7.0 18.3 5.2 6.1 18.3 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Phage_holin_7_1 PF16081.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 2.7 8.2 4.8 7.1 6.8 2.0 2.1 1 1 1 2 2 2 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family TBCA PF02970.16 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 3.2 8.1 17.2 3.5 8.0 5.1 3.0 1 1 2 3 3 3 0 Tubulin binding cofactor A JIP_LZII PF16471.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 3.8 7.8 20.3 0.16 12.2 9.4 2.7 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II EMP24_GP25L PF01105.24 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 3.9 7.4 11.5 9.2 6.2 11.5 1.7 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Med2 PF11214.8 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 4.2 7.6 18.4 3.2 7.9 1.4 3.4 1 1 2 3 3 3 0 Mediator complex subunit 2 Prominin PF05478.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.2 4.9 18.6 6 4.7 18.6 1.0 1 0 0 1 1 1 0 Prominin SecD-TM1 PF13721.6 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.5 7.5 8.6 3 8.3 1.8 2.8 1 1 2 3 3 3 0 SecD export protein N-terminal TM region DUF1664 PF07889.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.8 7.0 12.3 59 3.7 12.3 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) KxDL PF10241.9 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.9 7.3 18.6 0.44 10.9 6.0 3.1 1 1 2 3 3 3 0 Uncharacterized conserved protein DUF948 PF06103.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.9 7.2 16.6 1.6 9.0 8.4 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) LMBR1 PF04791.16 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 6.4 5.6 14.9 7.4 5.3 14.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DivIC PF04977.15 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 7.5 6.4 16.4 3.5e+02 1.0 0.1 3.2 2 1 0 2 2 2 0 Septum formation initiator KELK PF15796.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 8.2 7.0 16.2 3.4 8.2 10.9 2.2 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF16 PF01519.16 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 8.4 6.9 17.1 5.6 7.5 7.7 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 YabA PF06156.13 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 9.3 7.0 14.6 2 9.1 6.8 2.3 1 1 1 2 2 2 0 Initiation control protein YabA Leu_zip PF15294.6 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 9.9 5.6 27.9 5.5 6.4 5.0 2.0 1 1 1 2 2 2 0 Leucine zipper DNA_methylase PF00145.17 NODE_41444_length_495_cov_2.265217_g33888_i0forward_frame_3 - 2.5e-05 23.8 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase TMEM70 PF06979.12 NODE_41438_length_495_cov_4.282609_g33882_i0forward_frame_2 - 0.16 12.4 3.1 0.23 11.9 2.8 1.4 1 1 0 1 1 1 0 Assembly, mitochondrial proton-transport ATP synth complex A2M PF00207.22 NODE_41436_length_495_cov_4.358696_g33880_i0forward_frame_3 - 4e-08 33.0 0.0 6.6e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Alpha-2-macroglobulin family FixG_C PF11614.8 NODE_41436_length_495_cov_4.358696_g33880_i0forward_frame_3 - 0.054 13.7 0.0 0.077 13.2 0.0 1.2 1 0 0 1 1 1 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF2744 PF10910.8 NODE_41436_length_495_cov_4.358696_g33880_i0forward_frame_3 - 0.066 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2744) GRAB PF10375.9 NODE_41432_length_495_cov_39.782609_g33877_i0reverse_frame_2 - 0.14 12.0 0.7 0.36 10.8 0.7 1.7 1 0 0 1 1 1 0 GRIP-related Arf-binding domain Pkinase PF00069.25 NODE_41430_length_495_cov_56.876087_g33875_i0forward_frame_3 - 1e-15 57.9 0.0 1.2e-15 57.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_41430_length_495_cov_56.876087_g33875_i0forward_frame_3 - 1.7e-05 24.3 0.0 2.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Whirly PF08536.11 NODE_41429_length_495_cov_65.180435_g33874_i0forward_frame_2 - 0.17 11.7 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Whirly transcription factor PKcGMP_CC PF16808.5 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 0.018 14.9 2.7 0.018 14.9 2.7 2.6 2 1 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Aida_N PF08910.10 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 0.078 13.4 5.7 0.077 13.4 2.8 2.0 1 1 0 2 2 2 0 Aida N-terminus Holin_BhlA PF10960.8 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 0.38 10.8 3.9 0.48 10.4 0.6 2.3 2 0 0 2 2 2 0 BhlA holin family DUF1664 PF07889.12 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 0.71 9.9 4.5 0.93 9.5 4.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) TEX13 PF15186.6 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 1.4 8.6 7.2 3.2 7.4 6.3 1.9 1 1 1 2 2 2 0 Testis-expressed sequence 13 protein family HIP1_clath_bdg PF16515.5 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 2 9.1 11.1 2.4 8.8 9.0 1.9 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF724 PF05266.14 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 2.2 8.1 9.1 3.1 7.6 9.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Med9 PF07544.13 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 6.9 6.8 12.5 2.5 8.3 7.1 2.7 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Bac_globin PF01152.21 NODE_41426_length_495_cov_74.850000_g33871_i0reverse_frame_2 - 1e-06 28.9 0.1 2e-06 27.9 0.0 1.5 2 0 0 2 2 2 1 Bacterial-like globin DUF3975 PF13126.6 NODE_41426_length_495_cov_74.850000_g33871_i0forward_frame_3 - 0.099 13.1 0.2 0.17 12.3 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) SET PF00856.28 NODE_41420_length_495_cov_91.110870_g33865_i0forward_frame_3 - 1.7e-06 28.5 0.0 2.4e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 SET domain Phage_Treg PF04761.12 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_3 - 0.00071 19.6 4.6 36 4.6 0.1 5.2 6 0 0 6 6 6 4 Lactococcus bacteriophage putative transcription regulator RNase_PH_C PF03725.15 NODE_41414_length_495_cov_107.663043_g33859_i0forward_frame_2 - 2.1 8.4 8.1 12 6.1 2.5 3.7 1 1 2 3 3 3 0 3' exoribonuclease family, domain 2 Ploopntkinase2 PF18747.1 NODE_41410_length_495_cov_137.615217_g33855_i0forward_frame_3 - 0.12 11.6 0.1 0.17 11.1 0.1 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase2 COPI_C PF06957.11 NODE_41402_length_495_cov_386.365217_g33848_i0forward_frame_3 - 8.7e-09 34.6 0.5 1.3e-08 34.0 0.5 1.3 1 1 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus Peptidase_C1 PF00112.23 NODE_41393_length_495_cov_246063.984783_g33840_i0reverse_frame_3 - 2.1e-18 67.2 0.1 2.9e-18 66.8 0.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 NODE_41393_length_495_cov_246063.984783_g33840_i0reverse_frame_3 - 0.00073 19.4 0.0 0.0019 18.1 0.0 1.6 1 1 0 1 1 1 1 Peptidase family C1 propeptide DUF2615 PF11027.8 ORF99383 - 0.0061 16.7 0.0 0.0097 16.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2615) Ion_trans PF00520.31 ORF98043 - 7.8e-34 117.0 2.9 9e-34 116.8 2.9 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF98043 - 0.0018 17.1 7.6 0.011 14.4 0.6 2.0 1 1 1 2 2 2 2 Polycystin cation channel TPR_2 PF07719.17 ORF96868 - 0.001 19.0 0.5 0.0021 18.0 0.5 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF96868 - 0.0088 15.8 0.7 0.024 14.4 0.7 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat Hydrolase_3 PF08282.12 ORF96868 - 0.12 12.1 0.3 0.13 12.0 0.3 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase TPR_8 PF13181.6 ORF96868 - 0.36 11.1 3.3 1.2 9.6 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat Fe_hyd_SSU PF02256.17 ORF96743 - 2.4e-05 24.3 1.4 0.031 14.4 0.1 2.4 2 0 0 2 2 2 2 Iron hydrogenase small subunit Profilin PF00235.19 ORF95914 - 3.9e-13 49.8 0.4 6.3e-13 49.1 0.4 1.3 1 0 0 1 1 1 1 Profilin ALIX_LYPXL_bnd PF13949.6 ORF95550 - 1.8e-11 43.9 1.9 2.1e-11 43.7 1.9 1.0 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV RPN7 PF10602.9 ORF95550 - 0.028 14.2 0.5 0.047 13.4 0.2 1.6 1 1 0 1 1 1 0 26S proteasome subunit RPN7 baeRF_family3 PF18845.1 ORF95550 - 0.041 14.1 0.1 0.059 13.6 0.1 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 3 CAP_N PF01213.19 ORF95550 - 0.082 12.4 0.4 0.15 11.5 0.0 1.6 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) N terminal DUF1043 PF06295.12 ORF95550 - 0.15 12.1 1.6 0.32 11.0 1.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) Ski_Sno PF02437.17 ORF95226 - 0.031 14.0 2.0 0.56 10.0 0.1 2.4 2 0 0 2 2 2 0 SKI/SNO/DAC family YfbU PF03887.14 ORF95123 - 2.8e-69 232.4 3.0 3.1e-69 232.2 3.0 1.0 1 0 0 1 1 1 1 YfbU domain Asp-Al_Ex PF06826.12 ORF94654 - 1.3e-40 139.0 19.5 1.4e-40 138.8 19.5 1.0 1 0 0 1 1 1 1 Predicted Permease Membrane Region E3_UbLigase_RBR PF18091.1 ORF94267 - 0.036 14.2 0.8 0.055 13.6 0.8 1.4 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain ATP-synt_C PF00137.21 ORF93695 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C M-factor PF03855.13 ORF92586 - 0.048 13.8 1.4 0.099 12.8 1.4 1.6 1 0 0 1 1 1 0 M-factor V_ATPase_I PF01496.19 ORF92427 - 0.00084 17.4 1.0 0.0009 17.3 1.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family TSC22 PF01166.18 ORF92427 - 0.0039 17.4 1.0 0.0089 16.3 1.0 1.6 1 0 0 1 1 1 1 TSC-22/dip/bun family DUF4709 PF15821.5 ORF92427 - 0.0053 17.0 5.3 0.0079 16.5 5.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4709) P22_Tail-4 PF11650.8 ORF92427 - 0.0054 16.7 0.1 1.2 9.1 0.1 2.1 1 1 1 2 2 2 1 P22 tail accessory factor UPF0242 PF06785.11 ORF92427 - 0.0076 16.4 9.0 0.0093 16.1 9.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF92427 - 0.0078 15.6 1.1 0.01 15.2 1.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) LPP PF04728.13 ORF92427 - 0.008 16.5 1.7 0.022 15.2 1.7 1.9 1 1 0 1 1 1 1 Lipoprotein leucine-zipper DUF5344 PF17279.2 ORF92427 - 0.0082 16.7 2.7 0.017 15.6 2.7 1.5 1 1 0 1 1 1 1 Family of unknown function (DUF5344) TMCO5 PF14992.6 ORF92427 - 0.011 15.4 6.9 0.013 15.1 6.9 1.1 1 0 0 1 1 1 0 TMCO5 family ACCA PF03255.14 ORF92427 - 0.02 14.8 1.7 0.033 14.1 1.7 1.4 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SHE3 PF17078.5 ORF92427 - 0.021 14.5 6.4 0.028 14.2 6.4 1.1 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 Prominin PF05478.11 ORF92427 - 0.048 11.6 1.2 0.055 11.4 1.2 1.0 1 0 0 1 1 1 0 Prominin K-box PF01486.17 ORF92427 - 0.052 13.7 3.8 0.052 13.7 3.8 2.1 2 0 0 2 2 2 0 K-box region Asp-B-Hydro_N PF05279.11 ORF92427 - 0.057 13.5 6.5 0.068 13.2 6.5 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region FapA PF03961.13 ORF92427 - 0.063 11.9 2.1 0.074 11.7 2.1 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Rho_Binding PF08912.11 ORF92427 - 0.1 13.4 6.8 0.15 12.9 6.4 1.6 1 1 0 1 1 1 0 Rho Binding FlaC_arch PF05377.11 ORF92427 - 0.11 12.9 1.0 0.11 12.9 1.0 2.1 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF4972 PF16342.5 ORF92427 - 0.12 12.1 1.3 0.35 10.5 1.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4972) DUF724 PF05266.14 ORF92427 - 0.13 12.0 6.0 0.18 11.6 6.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Sds3 PF08598.11 ORF92427 - 0.17 11.9 10.4 0.24 11.4 10.4 1.1 1 0 0 1 1 1 0 Sds3-like CK2S PF15011.6 ORF92427 - 0.18 11.7 5.3 0.46 10.4 5.3 1.7 1 1 0 1 1 1 0 Casein Kinase 2 substrate XhlA PF10779.9 ORF92427 - 0.22 11.8 7.7 0.21 11.8 1.4 2.6 2 1 0 2 2 2 0 Haemolysin XhlA YabA PF06156.13 ORF92427 - 0.23 12.1 4.6 0.37 11.5 4.6 1.4 1 0 0 1 1 1 0 Initiation control protein YabA Cep57_CLD_2 PF14197.6 ORF92427 - 0.29 11.3 7.9 0.31 11.2 6.8 1.6 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 Atg14 PF10186.9 ORF92427 - 0.41 9.7 4.0 0.49 9.4 4.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 ORF92427 - 0.65 10.2 5.1 1.5 9.0 5.4 1.4 2 0 0 2 2 1 0 Fibrinogen alpha/beta chain family Ax_dynein_light PF10211.9 ORF92427 - 1.2 9.1 10.5 1.8 8.5 10.5 1.4 1 1 0 1 1 1 0 Axonemal dynein light chain DivIC PF04977.15 ORF92427 - 1.8 8.4 9.7 0.7 9.7 5.5 2.2 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 ORF92427 - 2.4 7.3 5.0 3.1 7.0 5.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein Tup_N PF08581.10 ORF92427 - 3.8 7.9 13.4 0.7 10.2 7.5 2.1 1 1 1 2 2 2 0 Tup N-terminal HIP1_clath_bdg PF16515.5 ORF92427 - 4.6 7.9 13.1 21 5.8 13.2 1.8 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 OmpH PF03938.14 ORF92427 - 4.9 7.5 13.7 15 5.9 13.8 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) TolA_bind_tri PF16331.5 ORF92427 - 9.1 6.4 14.3 1.1 9.4 7.0 2.3 1 1 1 2 2 2 0 TolA binding protein trimerisation Gly_kinase PF02595.15 ORF90303 - 6.4e-46 157.0 3.8 7.1e-46 156.9 3.8 1.0 1 0 0 1 1 1 1 Glycerate kinase family RAP1 PF07218.11 ORF89545 - 0.055 11.8 23.6 0.057 11.7 23.6 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) HSD3 PF15244.6 ORF89545 - 0.25 10.8 23.4 0.35 10.3 23.4 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 7, or HSD3 Macoilin PF09726.9 ORF89545 - 0.28 9.7 24.3 0.31 9.5 24.3 1.1 1 0 0 1 1 1 0 Macoilin family FAM199X PF15814.5 ORF89545 - 0.4 9.7 20.7 0.47 9.5 20.7 1.1 1 0 0 1 1 1 0 Protein family FAM199X Apt1 PF10351.9 ORF89545 - 0.82 8.4 21.6 0.95 8.2 21.6 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Miga PF10265.9 ORF89545 - 0.9 8.4 14.8 1.1 8.2 14.8 1.2 1 0 0 1 1 1 0 Mitoguardin Menin PF05053.13 ORF89545 - 2.3 6.5 11.3 2.5 6.4 11.3 1.1 1 0 0 1 1 1 0 Menin DUF4698 PF15769.5 ORF89545 - 4.6 6.2 16.7 5.2 6.0 16.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4698) ALMT PF11744.8 ORF89545 - 5.1 5.8 14.1 5.8 5.6 14.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF3612 PF12268.8 ORF89443 - 0.0051 16.9 0.3 0.0063 16.6 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3612) EF-hand_7 PF13499.6 ORF88778 - 8.7e-10 38.9 2.2 5.7e-06 26.7 0.9 2.4 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF88778 - 1e-09 37.2 4.6 1.8e-05 24.0 2.6 3.8 4 0 0 4 4 4 2 EF hand EF-hand_8 PF13833.6 ORF88778 - 1.6e-09 37.4 5.2 0.0004 20.2 0.0 3.4 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF88778 - 1.9e-08 34.5 0.1 0.00014 22.1 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_6 PF13405.6 ORF88778 - 3.8e-06 26.4 3.6 0.00012 21.8 1.3 3.2 3 0 0 3 3 3 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF88778 - 0.0012 19.2 0.1 0.021 15.1 0.0 2.1 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_5 PF13202.6 ORF88778 - 0.0023 17.3 2.0 0.0039 16.6 0.7 2.2 2 0 0 2 2 2 1 EF hand KAsynt_C_assoc PF16197.5 ORF88501 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF88501 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF88501 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family Elicitin PF00964.17 ORF87942 - 0.12 12.5 0.0 0.3 11.2 0.0 1.6 2 0 0 2 2 2 0 Elicitin MAP65_ASE1 PF03999.12 ORF87501 - 1 7.9 13.6 0.55 8.9 12.1 1.3 1 1 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Aminotran_3 PF00202.21 ORF86811 - 3e-13 49.2 0.0 3.6e-13 48.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III PH PF00169.29 ORF85446 - 3.1e-13 50.1 0.0 3.8e-13 49.9 0.0 1.1 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF85446 - 0.0013 19.2 0.4 0.0023 18.3 0.4 1.6 1 1 0 1 1 1 1 Pleckstrin homology domain PH_8 PF15409.6 ORF85446 - 0.015 15.5 0.1 0.07 13.4 0.1 1.9 1 1 0 1 1 1 0 Pleckstrin homology domain Arf PF00025.21 ORF84745 - 7.4e-76 253.5 0.1 8.3e-76 253.3 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF84745 - 1.9e-14 53.9 0.0 2.5e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF84745 - 2.8e-13 49.8 0.0 3.1e-13 49.6 0.0 1.0 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF84745 - 3.2e-13 49.5 0.0 3.8e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF84745 - 1.1e-10 41.2 0.4 7.5e-08 31.9 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF84745 - 2.5e-10 40.1 0.0 3.1e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF84745 - 1.1e-05 25.5 0.0 1.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF84745 - 0.013 15.6 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF84745 - 0.038 13.3 0.1 0.066 12.5 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Actin PF00022.19 ORF8421 - 2.2e-56 191.3 0.0 2.4e-56 191.1 0.0 1.0 1 0 0 1 1 1 1 Actin UPF0114 PF03350.16 ORF84015 - 7.3e-36 122.9 6.0 7.3e-36 122.9 6.0 1.3 2 0 0 2 2 2 1 Uncharacterized protein family, UPF0114 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks131.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks131.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks131.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks131.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TP53IP5 PF15331.6 ORF82358 - 0.0019 18.4 8.3 0.38 10.9 0.4 3.4 2 1 1 3 3 3 3 Cellular tumour antigen p53-inducible 5 MuF_C PF18819.1 ORF82358 - 0.16 12.0 0.8 12 6.0 0.0 2.8 1 1 2 3 3 3 0 Phage MuF-C-terminal domain Methyltransf_24 PF13578.6 ORF81927 - 3.5e-14 53.7 0.0 4.6e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Borrelia_orfD PF02999.14 ORF81927 - 0.21 11.9 0.0 0.92 9.9 0.0 1.9 2 0 0 2 2 2 0 Borrelia orf-D family Ribosomal_L11_N PF03946.14 ORF81539 - 2.7e-17 62.3 1.3 4.7e-17 61.6 1.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF81539 - 2.3e-15 56.9 0.1 3.7e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain DUF3169 PF11368.8 ORF80288 - 5.3e-05 22.8 0.6 7.6e-05 22.4 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3169) TMEM154 PF15102.6 ORF80288 - 0.016 15.1 0.9 0.055 13.4 0.0 2.1 1 1 2 3 3 3 0 TMEM154 protein family Adipogenin PF15202.6 ORF80288 - 0.035 14.1 1.4 0.049 13.6 0.3 1.8 2 0 0 2 2 2 0 Adipogenin DUF3671 PF12420.8 ORF80288 - 1.3 9.1 6.8 7.2 6.7 6.8 2.0 1 1 0 1 1 1 0 Protein of unknown function TetR_C_7 PF14246.6 ORF80124 - 0.0029 17.6 0.8 0.0049 16.9 0.8 1.3 1 0 0 1 1 1 1 AefR-like transcriptional repressor, C-terminal domain Apolipoprotein PF01442.18 ORF80124 - 0.0055 16.6 0.1 2.7 7.8 0.0 2.0 2 0 0 2 2 2 2 Apolipoprotein A1/A4/E domain Phasin_2 PF09361.10 ORF80124 - 0.0074 16.5 3.1 0.014 15.6 0.6 2.1 2 0 0 2 2 2 1 Phasin protein DUF948 PF06103.11 ORF80124 - 0.014 15.7 1.7 0.12 12.7 0.2 2.2 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) ApoLp-III PF07464.11 ORF80124 - 0.088 12.9 0.1 3 7.9 0.1 2.1 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) WXG100 PF06013.12 ORF80124 - 0.15 12.3 3.5 1 9.6 0.5 2.5 2 1 0 2 2 2 0 Proteins of 100 residues with WXG T7SS_ESX_EspC PF10824.8 ORF80124 - 1.7 9.2 9.3 2.5 8.7 0.4 2.2 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm JIP_LZII PF16471.5 ORF79932 - 0.0021 18.2 3.0 0.019 15.1 0.0 3.0 3 0 0 3 3 3 1 JNK-interacting protein leucine zipper II DUF4601 PF15373.6 ORF79932 - 0.0089 15.0 0.2 0.01 14.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4601) DUF1257 PF06868.11 ORF79932 - 0.059 13.6 0.8 0.32 11.3 0.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1257) bZIP_1 PF00170.21 ORF79932 - 0.063 13.4 0.1 0.063 13.4 0.1 2.4 3 0 0 3 3 3 0 bZIP transcription factor TSC22 PF01166.18 ORF79932 - 0.081 13.3 1.3 3.7 7.9 0.1 2.6 2 0 0 2 2 2 0 TSC-22/dip/bun family CsgA PF17334.2 ORF79932 - 0.14 12.9 4.4 0.053 14.3 1.6 1.8 2 0 0 2 2 2 0 Minor curli fiber component A TPR_MLP1_2 PF07926.12 ORF79932 - 0.24 11.5 7.7 0.3 11.2 7.7 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Ribosomal_L11_N PF03946.14 ORF7969 - 2.4e-17 62.5 1.2 4.3e-17 61.7 1.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF7969 - 2.2e-15 56.9 0.1 3.7e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain U-box PF04564.15 ORF79578 - 2.5e-20 72.4 1.2 2.5e-20 72.4 1.2 1.6 2 0 0 2 2 2 1 U-box domain Ufd2P_core PF10408.9 ORF79578 - 0.00012 20.9 0.1 0.00012 20.9 0.1 1.5 2 0 0 2 2 2 1 Ubiquitin elongating factor core Amidohydro_1 PF01979.20 ORF79578 - 0.00093 18.6 0.0 0.0012 18.2 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Blt1_C PF17183.4 ORF79568 - 0.096 12.3 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Get5 carboxyl domain Actin PF00022.19 ORF79366 - 2.2e-56 191.3 0.0 2.4e-56 191.1 0.0 1.0 1 0 0 1 1 1 1 Actin DUF2894 PF11445.8 ORF79154 - 0.077 13.5 0.1 0.09 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) Selenoprotein_S PF06936.11 ORF79154 - 0.15 11.9 5.5 0.18 11.6 5.5 1.2 1 0 0 1 1 1 0 Selenoprotein S (SelS) SWI-SNF_Ssr4 PF08549.10 ORF79154 - 0.61 8.7 4.7 0.68 8.5 4.7 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) Phage_HK97_TLTM PF06120.11 ORF79154 - 2.5 7.2 11.8 2.5 7.2 10.7 1.5 1 1 1 2 2 2 0 Tail length tape measure protein DUF1640 PF07798.11 ORF79154 - 6.4 6.8 13.3 11 6.1 9.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) SR-25 PF10500.9 ORF77042 - 0.031 13.9 4.9 0.042 13.5 4.9 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein KAsynt_C_assoc PF16197.5 ORF75530 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF75530 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF75530 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family ATP-synt_C PF00137.21 ORF74851 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C SRP1_TIP1 PF00660.17 ORF74274 - 0.094 12.8 0.6 0.16 12.1 0.6 1.4 1 1 0 1 1 1 0 Seripauperin and TIP1 family Methyltransf_13 PF08421.11 ORF74047 - 0.14 12.4 0.3 0.3 11.4 0.3 1.5 1 0 0 1 1 1 0 Putative zinc binding domain ATP_bind_2 PF03668.15 ORF73968 - 0.0013 18.1 0.0 0.0015 17.9 0.0 1.1 1 0 0 1 1 1 1 P-loop ATPase protein family SMP PF04927.12 ORF73586 - 1.9 9.0 7.9 4.1 7.9 0.1 2.5 2 0 0 2 2 2 0 Seed maturation protein DUF4179 PF13786.6 ORF73586 - 2.7 8.5 3.9 13 6.4 1.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4179) DUF4385 PF14328.6 ORF73200 - 0.024 14.7 1.6 0.073 13.1 0.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4385) YppF PF14178.6 ORF73200 - 0.034 14.0 1.0 2.8 7.9 0.1 2.7 2 1 1 3 3 3 0 YppF-like protein DNTTIP1_dimer PF18192.1 ORF72537 - 0.057 13.8 0.2 7.9 6.9 0.0 3.3 2 1 1 3 3 3 0 DNTTIP1 dimerisation domain Arf PF00025.21 ORF72527 - 7.4e-76 253.5 0.1 8.3e-76 253.3 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF72527 - 1.9e-14 53.9 0.0 2.5e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF72527 - 2.8e-13 49.8 0.0 3.1e-13 49.6 0.0 1.0 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF72527 - 3.2e-13 49.5 0.0 3.8e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF72527 - 1.1e-10 41.2 0.4 7.5e-08 31.9 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF72527 - 2.5e-10 40.1 0.0 3.1e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF72527 - 1.1e-05 25.5 0.0 1.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF72527 - 0.013 15.6 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF72527 - 0.038 13.3 0.1 0.066 12.5 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase E3_UbLigase_RBR PF18091.1 ORF72022 - 0.036 14.2 0.8 0.055 13.6 0.8 1.4 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain EF-hand_1 PF00036.32 ORF70959 - 9.7e-33 109.3 10.7 5e-08 31.9 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF70959 - 9.1e-31 106.1 1.8 1.4e-15 57.5 0.8 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF70959 - 1.6e-28 98.3 10.0 1.4e-14 53.7 0.8 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF70959 - 9.5e-28 93.7 6.1 6.2e-08 32.0 0.3 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF70959 - 2.8e-21 74.0 13.7 3e-06 26.5 0.7 5.4 5 1 1 6 6 6 4 EF hand EF-hand_9 PF14658.6 ORF70959 - 1.9e-12 47.3 0.0 3.9e-06 27.1 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF70959 - 6.9e-07 29.2 0.1 0.0035 17.3 0.2 2.3 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 ORF70959 - 2.1e-05 24.6 0.1 0.0041 17.3 0.0 2.4 2 1 1 3 3 3 1 Dockerin type I domain SPARC_Ca_bdg PF10591.9 ORF70959 - 0.00033 21.0 0.1 0.11 12.9 0.2 2.1 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region DUF2666 PF10869.8 ORF70959 - 0.0033 17.6 0.4 0.99 9.6 0.2 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF2666) Caleosin PF05042.13 ORF70959 - 0.0039 17.1 0.2 3.1 7.7 0.0 3.1 1 1 1 3 3 3 1 Caleosin related protein EFhand_Ca_insen PF08726.10 ORF70959 - 0.005 16.9 0.5 0.0099 16.0 0.5 1.5 1 0 0 1 1 1 1 Ca2+ insensitive EF hand RloB PF13707.6 ORF70959 - 0.0056 16.9 0.0 0.29 11.3 0.0 2.1 1 1 1 2 2 2 1 RloB-like protein DUF5580 PF17743.1 ORF70959 - 0.01 14.4 0.0 0.012 14.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_11 PF08976.11 ORF70959 - 0.032 15.1 0.0 0.31 11.9 0.0 1.9 1 1 1 2 2 2 0 EF-hand domain DUF1296 PF06972.11 ORF70959 - 0.035 14.2 0.1 0.2 11.8 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1296) UPF0154 PF03672.13 ORF70959 - 0.072 13.1 0.0 11 6.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) EspA PF03433.13 ORF70959 - 0.077 12.8 0.2 1.7 8.5 0.1 2.1 2 0 0 2 2 2 0 EspA-like secreted protein Toprim_2 PF13155.6 ORF70959 - 0.12 12.8 0.2 1 9.8 0.0 2.2 1 1 0 2 2 2 0 Toprim-like CAAP1 PF15335.6 ORF70959 - 0.15 12.7 0.1 0.39 11.3 0.1 1.7 1 0 0 1 1 1 0 Caspase activity and apoptosis inhibitor 1 His_Phos_1 PF00300.22 ORF70782 - 3.5e-07 30.1 0.0 4.4e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) MM_CoA_mutase PF01642.22 ORF70782 - 0.043 12.4 0.0 0.054 12.0 0.0 1.0 1 0 0 1 1 1 0 Methylmalonyl-CoA mutase KAsynt_C_assoc PF16197.5 ORF70673 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF70673 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF70673 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family Ribosomal_L11_N PF03946.14 ORF702 - 2.4e-17 62.5 1.2 4.3e-17 61.7 1.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF702 - 2.2e-15 56.9 0.1 3.7e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain FAM183 PF14886.6 ORF68448 - 9e-05 23.2 0.9 0.019 15.7 0.0 2.4 2 1 0 2 2 2 2 FAM183A and FAM183B related FSH1 PF03959.13 ORF66502 - 2.9e-16 59.8 0.0 3.8e-16 59.4 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) AAA_6 PF12774.7 ORF66502 - 0.099 11.6 0.2 0.18 10.7 0.0 1.5 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region Ago_PAZ PF18309.1 ORF64344 - 0.11 13.2 2.7 0.79 10.4 0.4 2.3 2 0 0 2 2 2 0 Argonaute PAZ domain DUF4484 PF14831.6 ORF63341 - 0.089 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4484) PRIMA1 PF16101.5 ORF62611 - 0.0021 18.1 1.0 0.0021 18.1 1.0 1.4 2 0 0 2 2 2 1 Proline-rich membrane anchor 1 DAO PF01266.24 ORF62345 - 7.5e-09 35.6 0.0 8.2e-09 35.5 0.0 1.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF62345 - 1.8e-05 24.1 0.0 2.3e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 ORF62345 - 3.2e-05 23.4 0.1 4.6e-05 22.9 0.1 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase HI0933_like PF03486.14 ORF62345 - 0.033 12.9 0.0 0.044 12.5 0.0 1.2 1 0 0 1 1 1 0 HI0933-like protein Pyr_redox_3 PF13738.6 ORF62345 - 0.074 12.3 0.0 0.087 12.1 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 ORF62345 - 0.081 12.9 0.0 0.14 12.1 0.0 1.5 1 1 0 1 1 1 0 FAD-NAD(P)-binding Pyr_redox PF00070.27 ORF62345 - 0.12 12.9 0.0 0.27 11.8 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Myb_DNA-binding PF00249.31 ORF61196 - 0.018 15.3 0.0 0.031 14.5 0.0 1.4 1 0 0 1 1 1 0 Myb-like DNA-binding domain SRP1_TIP1 PF00660.17 ORF60282 - 0.094 12.8 0.6 0.16 12.1 0.6 1.4 1 1 0 1 1 1 0 Seripauperin and TIP1 family EST1 PF10374.9 ORF57761 - 0.073 13.7 3.3 0.11 13.2 3.3 1.2 1 0 0 1 1 1 0 Telomerase activating protein Est1 XRN1_D2_D3 PF18334.1 ORF57761 - 0.11 12.8 3.7 3.9 7.8 0.2 2.4 2 0 0 2 2 2 0 Exoribonuclease Xrn1 D2/D3 domain SRP14 PF02290.15 ORF57761 - 0.18 12.2 4.1 0.13 12.6 1.2 2.2 1 1 1 2 2 2 0 Signal recognition particle 14kD protein Alpha-mann_mid PF09261.11 ORF56310 - 0.0021 18.2 0.0 0.0052 16.9 0.0 1.7 2 0 0 2 2 2 1 Alpha mannosidase middle domain Homeobox_KN PF05920.11 ORF56257 - 9.3e-11 41.5 0.3 2e-10 40.4 0.3 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF56257 - 1.6e-08 34.2 0.3 3.3e-08 33.2 0.3 1.6 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF56257 - 0.0038 16.7 0.0 0.0079 15.6 0.0 1.5 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez YbbR PF07949.12 ORF55719 - 0.015 15.7 0.6 0.043 14.2 0.6 1.9 1 0 0 1 1 1 0 YbbR-like protein SlyX PF04102.12 ORF55719 - 0.073 13.7 7.3 0.53 10.9 0.5 2.4 2 0 0 2 2 2 0 SlyX DUF5082 PF16888.5 ORF55719 - 0.11 12.8 16.7 0.43 10.9 6.9 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) MscS_porin PF12795.7 ORF55719 - 0.13 11.8 12.3 1.9 8.0 12.3 2.1 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain HR1 PF02185.16 ORF55719 - 0.15 12.2 9.4 0.28 11.3 0.3 3.1 2 1 1 3 3 3 0 Hr1 repeat XhlA PF10779.9 ORF55719 - 1.1 9.6 19.8 1.7 8.9 3.2 3.1 2 1 2 4 4 4 0 Haemolysin XhlA FlxA PF14282.6 ORF55719 - 1.6 8.7 19.0 5.5 7.0 0.5 3.0 2 1 0 2 2 2 0 FlxA-like protein ATP-synt_C PF00137.21 ORF54310 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C Abhydrolase_1 PF00561.20 ORF54287 - 9.2e-05 22.2 0.1 0.0041 16.8 0.2 2.1 1 1 1 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF54287 - 0.00013 21.3 0.2 0.068 12.4 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 ORF54287 - 0.0002 21.3 0.0 0.0075 16.1 0.0 2.0 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 ORF54287 - 0.023 14.8 0.0 0.048 13.8 0.0 1.5 1 1 0 1 1 1 0 TAP-like protein Abhydrolase_6 PF12697.7 ORF54287 - 0.065 13.8 6.0 0.12 12.9 6.0 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family Esterase PF00756.20 ORF54287 - 0.1 12.2 0.4 0.11 12.1 0.2 1.4 1 1 0 1 1 1 0 Putative esterase LIP PF03583.14 ORF54287 - 0.2 10.9 0.3 0.37 10.1 0.3 1.4 1 0 0 1 1 1 0 Secretory lipase TetR_C_7 PF14246.6 ORF52124 - 0.0029 17.6 0.8 0.0049 16.9 0.8 1.3 1 0 0 1 1 1 1 AefR-like transcriptional repressor, C-terminal domain Apolipoprotein PF01442.18 ORF52124 - 0.0055 16.6 0.1 2.7 7.8 0.0 2.0 2 0 0 2 2 2 2 Apolipoprotein A1/A4/E domain Phasin_2 PF09361.10 ORF52124 - 0.0074 16.5 3.1 0.014 15.6 0.6 2.1 2 0 0 2 2 2 1 Phasin protein DUF948 PF06103.11 ORF52124 - 0.012 15.9 1.5 0.11 12.8 0.2 2.2 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) ApoLp-III PF07464.11 ORF52124 - 0.088 12.9 0.1 3 7.9 0.1 2.1 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) WXG100 PF06013.12 ORF52124 - 0.15 12.3 3.5 1 9.6 0.5 2.5 2 1 0 2 2 2 0 Proteins of 100 residues with WXG T7SS_ESX_EspC PF10824.8 ORF52124 - 1.7 9.2 9.3 2.5 8.7 0.4 2.2 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm NAC PF01849.18 ORF5191 - 6e-15 55.0 0.1 1.1e-14 54.2 0.1 1.4 1 0 0 1 1 1 1 NAC domain cNMP_binding PF00027.29 ORF51235 - 3.8e-11 42.9 0.0 3e-07 30.4 0.0 2.1 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Herpes_BMRF2 PF04633.12 ORF50257 - 0.0095 15.2 1.4 0.013 14.8 1.4 1.1 1 0 0 1 1 1 1 Herpesvirus BMRF2 protein ATP-synt_C PF00137.21 ORF50196 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C Got1 PF04178.12 ORF49878 - 3.6e-27 95.0 6.1 4.7e-27 94.6 5.5 1.5 1 1 1 2 2 2 1 Got1/Sft2-like family Pkr1 PF08636.10 ORF49878 - 1.7 8.8 8.9 1 9.6 6.2 1.8 2 0 0 2 2 2 0 ER protein Pkr1 PRK PF00485.18 ORF49470 - 1.8e-32 112.7 0.5 2.2e-32 112.4 0.5 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family UPF0114 PF03350.16 ORF49181 - 7.3e-36 122.9 6.0 7.3e-36 122.9 6.0 1.3 2 0 0 2 2 2 1 Uncharacterized protein family, UPF0114 DUF3645 PF12359.8 ORF4868 - 0.041 13.3 0.1 0.1 12.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3645) MORN PF02493.20 ORF48579 - 1.6e-13 49.7 12.5 4.8e-07 29.3 1.7 3.0 4 0 0 4 4 4 2 MORN repeat MORN PF02493.20 ORF48578 - 1.2e-28 97.3 29.6 1.7e-08 33.9 1.1 5.1 5 0 0 5 5 5 4 MORN repeat ID PF18543.1 ORF48578 - 0.13 12.3 1.5 19 5.3 0.0 4.0 5 0 0 5 5 5 0 Intracellular delivery domain DUF3471 PF11954.8 ORF48578 - 0.13 12.7 1.8 0.6 10.6 1.8 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF3471) DUF3048_C PF17479.2 ORF48578 - 0.27 11.7 5.1 1.4 9.4 1.5 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain FSA_C PF10479.9 ORF48183 - 4.3 5.4 5.3 4.9 5.2 5.3 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus HrpB2 PF09487.10 ORF48003 - 0.01 16.3 0.4 0.014 15.8 0.4 1.3 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB2) HycI PF01750.18 ORF47825 - 1.2e-37 128.6 0.1 1.4e-37 128.4 0.1 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease MAF_flag10 PF01973.18 ORF47825 - 0.041 13.6 0.0 0.11 12.2 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF115 Aminotran_1_2 PF00155.21 ORF46923 - 6.7e-07 28.8 0.0 8.6e-07 28.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 ORF46923 - 5.5e-05 21.9 0.0 7e-05 21.5 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Met_gamma_lyase PF06838.11 ORF46923 - 0.034 12.7 0.0 0.041 12.4 0.0 1.1 1 0 0 1 1 1 0 Methionine gamma-lyase Epimerase PF01370.21 ORF46923 - 0.16 11.4 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family TSC22 PF01166.18 ORF46592 - 3.3 8.1 7.3 0.73 10.2 2.9 2.0 2 0 0 2 2 2 0 TSC-22/dip/bun family CN_hydrolase PF00795.22 ORF46275 - 2.8e-30 105.5 0.0 3.1e-30 105.4 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Kelch_1 PF01344.25 ORF46275 - 0.14 11.8 0.0 0.3 10.7 0.0 1.6 1 0 0 1 1 1 0 Kelch motif NAD_binding_11 PF14833.6 ORF45698 - 5.4e-31 107.4 0.0 6.8e-31 107.1 0.0 1.1 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACP_PD PF04336.12 ORF45361 - 0.11 12.9 0.5 0.31 11.5 0.3 1.7 1 1 0 1 1 1 0 Acyl carrier protein phosphodiesterase HpcH_HpaI PF03328.14 ORF45361 - 0.12 11.5 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family Dapper PF15268.6 ORF44427 - 0.18 10.7 4.4 0.2 10.5 4.4 1.0 1 0 0 1 1 1 0 Dapper Fe_hyd_SSU PF02256.17 ORF43573 - 2.4e-05 24.3 1.4 0.031 14.4 0.1 2.4 2 0 0 2 2 2 2 Iron hydrogenase small subunit Homeobox_KN PF05920.11 ORF43115 - 9.4e-11 41.4 0.3 2e-10 40.4 0.3 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF43115 - 1.6e-08 34.2 0.3 3.3e-08 33.2 0.3 1.6 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF43115 - 0.0038 16.7 0.0 0.0079 15.6 0.0 1.5 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez GMC_oxred_C PF05199.13 ORF42641 - 5.3e-17 62.7 0.0 6.6e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase 4HBT_3 PF13622.6 ORF41342 - 0.035 14.4 1.1 0.045 14.0 1.1 1.1 1 0 0 1 1 1 0 Thioesterase-like superfamily Alpha-mann_mid PF09261.11 ORF41127 - 0.0021 18.2 0.0 0.0052 16.9 0.0 1.7 2 0 0 2 2 2 1 Alpha mannosidase middle domain SpoU_methylase PF00588.19 ORF40044 - 4.5e-11 43.1 0.0 6.3e-11 42.6 0.0 1.3 1 1 0 1 1 1 1 SpoU rRNA Methylase family zf_UBZ PF18439.1 ORF40044 - 0.058 13.0 0.1 0.11 12.1 0.1 1.4 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger MAP65_ASE1 PF03999.12 ORF40013 - 1 7.9 13.6 0.55 8.9 12.1 1.3 1 1 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) ADIP PF11559.8 ORF39699 - 0.0055 16.8 13.0 0.02 15.0 2.3 2.2 1 1 1 2 2 2 2 Afadin- and alpha -actinin-Binding FAM76 PF16046.5 ORF39699 - 0.016 14.5 13.3 0.018 14.4 13.3 1.0 1 0 0 1 1 1 0 FAM76 protein PI_PP_I PF18363.1 ORF39699 - 0.16 12.2 3.3 0.38 11.0 0.4 2.5 1 1 0 2 2 2 0 Phosphoinositide phosphatase insertion domain ATG16 PF08614.11 ORF39699 - 0.18 12.0 13.0 1.9 8.7 3.8 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) KxDL PF10241.9 ORF39699 - 0.35 11.2 11.9 0.14 12.4 1.7 3.1 1 1 2 3 3 3 0 Uncharacterized conserved protein DUF2203 PF09969.9 ORF39699 - 0.81 10.4 9.9 3.8 8.3 2.6 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) HMMR_N PF15905.5 ORF39699 - 1 8.8 20.1 2.2 7.7 19.8 1.6 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal ZapB PF06005.12 ORF39699 - 1.1 9.8 14.6 1.9 9.0 5.0 2.9 1 1 1 2 2 2 0 Cell division protein ZapB SlyX PF04102.12 ORF39699 - 1.3 9.7 9.1 0.11 13.2 1.3 2.7 1 1 1 3 3 3 0 SlyX AAA_6 PF12774.7 ORF39699 - 1.4 7.8 5.0 1.9 7.4 5.0 1.1 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region DUF724 PF05266.14 ORF39699 - 1.8 8.3 13.1 0.23 11.3 8.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 ORF39699 - 3.2 7.8 21.3 2.6 8.1 14.3 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF39699 - 4.5 7.6 13.0 4 7.7 3.6 2.4 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain XhlA PF10779.9 ORF39699 - 6.5 7.0 9.4 14 6.0 2.2 2.9 1 1 3 4 4 4 0 Haemolysin XhlA zinc_ribbon_2 PF13240.6 ORF39612 - 2.1e-05 24.1 4.0 3.4e-05 23.4 4.0 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF39612 - 3.7e-05 23.0 2.2 6.5e-05 22.2 2.2 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF39612 - 0.00035 20.5 0.8 0.00057 19.9 0.8 1.3 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 ORF39612 - 0.014 15.4 0.3 0.026 14.5 0.3 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Filament PF00038.21 ORF39612 - 0.055 13.0 0.4 0.082 12.5 0.4 1.3 1 0 0 1 1 1 0 Intermediate filament protein Snapin_Pallidin PF14712.6 ORF39612 - 0.079 13.4 4.3 0.16 12.4 4.3 1.5 1 0 0 1 1 1 0 Snapin/Pallidin TF_Zn_Ribbon PF08271.12 ORF39612 - 0.08 12.5 0.2 0.2 11.2 0.3 1.6 1 1 1 2 2 2 0 TFIIB zinc-binding YlqD PF11068.8 ORF39612 - 0.16 12.3 1.8 0.24 11.8 1.8 1.2 1 0 0 1 1 1 0 YlqD protein DUF1678 PF07913.11 ORF39612 - 0.17 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1678) RNA_POL_M_15KD PF02150.16 ORF39612 - 0.19 11.7 1.1 6.6 6.7 0.0 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Nudix_N_2 PF14803.6 ORF39612 - 0.27 11.2 3.7 2.7 8.0 0.3 2.3 2 0 0 2 2 2 0 Nudix N-terminal DNA_RNApol_7kD PF03604.13 ORF39612 - 1.3 8.7 4.4 3.3 7.5 4.4 1.6 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit NOB1_Zn_bind PF08772.11 ORF39612 - 3.5 7.8 5.8 17 5.6 0.7 2.3 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like ALIX_LYPXL_bnd PF13949.6 ORF38570 - 1.8e-11 43.9 1.9 2.1e-11 43.7 1.9 1.0 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV RPN7 PF10602.9 ORF38570 - 0.028 14.2 0.5 0.047 13.4 0.2 1.6 1 1 0 1 1 1 0 26S proteasome subunit RPN7 baeRF_family3 PF18845.1 ORF38570 - 0.041 14.1 0.1 0.059 13.6 0.1 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 3 CAP_N PF01213.19 ORF38570 - 0.082 12.4 0.4 0.15 11.5 0.0 1.6 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) N terminal DUF1043 PF06295.12 ORF38570 - 0.15 12.1 1.6 0.32 11.0 1.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) DeoRC PF00455.22 ORF37948 - 7.7e-46 156.0 2.8 9e-46 155.7 2.8 1.0 1 0 0 1 1 1 1 DeoR C terminal sensor domain Rib_5-P_isom_A PF06026.14 ORF37948 - 0.039 13.6 0.2 0.059 13.0 0.2 1.3 1 0 0 1 1 1 0 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BRCT_2 PF16589.5 ORF37831 - 1.1e-13 51.4 0.1 1.9e-13 50.6 0.1 1.3 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 ORF37831 - 0.023 15.1 0.1 0.063 13.7 0.1 1.9 1 1 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain Helicase_C_2 PF13307.6 ORF37784 - 0.022 15.0 0.0 0.025 14.8 0.0 1.2 1 0 0 1 1 1 0 Helicase C-terminal domain DUF1525 PF07511.11 ORF37219 - 0.25 11.5 2.2 2.9 8.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1525) DUF4268 PF14088.6 ORF37148 - 0.0048 16.8 2.8 0.0048 16.8 2.8 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4268) ATP-synt_C PF00137.21 ORF34900 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C Ank_4 PF13637.6 ORF34262 - 6.1e-19 68.1 0.6 3.5e-05 24.3 0.1 4.0 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF34262 - 9.8e-17 61.3 0.1 3.1e-08 34.1 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF34262 - 3.6e-15 55.8 3.0 1e-09 38.5 0.4 2.7 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF34262 - 6.3e-13 48.5 1.5 0.00019 21.7 0.1 5.0 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF34262 - 2.4e-11 42.8 1.5 0.00028 21.1 0.0 5.3 5 1 0 5 5 5 3 Ankyrin repeat AP-5_subunit_s1 PF15001.6 ORF33826 - 2.7e-26 92.8 0.0 3.1e-26 92.6 0.0 1.1 1 0 0 1 1 1 1 AP-5 complex subunit sigma-1 Clat_adaptor_s PF01217.20 ORF33826 - 0.15 12.0 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Clathrin adaptor complex small chain SF-assemblin PF06705.11 ORF33646 - 1e-05 25.0 11.4 3.1e-05 23.4 11.4 2.2 1 1 0 1 1 1 1 SF-assemblin/beta giardin BBP1_C PF15272.6 ORF33646 - 0.036 13.9 8.2 0.1 12.4 8.2 1.8 1 1 0 1 1 1 0 Spindle pole body component BBP1, C-terminal DUF29 PF01724.16 ORF33646 - 0.08 13.2 7.8 0.024 14.9 2.9 2.0 1 1 0 2 2 2 0 Domain of unknown function DUF29 FUSC PF04632.12 ORF33646 - 3.6 6.0 7.7 4.3 5.8 7.7 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family MutS_III PF05192.18 ORF33646 - 5.1 7.3 7.5 6.3 7.0 7.5 1.1 1 0 0 1 1 1 0 MutS domain III FYVE_2 PF02318.16 ORF33646 - 8.9 6.6 13.6 0.48 10.6 2.4 2.7 1 1 2 3 3 3 0 FYVE-type zinc finger zf-Paramyx-P PF13008.7 ORF33488 - 0.046 13.2 0.3 1.1 8.8 0.1 2.2 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein Actin PF00022.19 ORF33254 - 2.2e-56 191.3 0.0 2.4e-56 191.1 0.0 1.0 1 0 0 1 1 1 1 Actin zf-Paramyx-P PF13008.7 ORF32635 - 0.046 13.2 0.3 1.1 8.8 0.1 2.2 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein Ank_2 PF12796.7 ORF32013 - 4.8e-18 65.5 0.0 2.7e-09 37.5 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF32013 - 1.4e-13 51.0 0.2 2.1e-05 25.0 0.0 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF32013 - 3.3e-09 36.2 0.0 0.26 12.0 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF32013 - 1.2e-08 35.0 0.1 0.072 13.6 0.0 4.0 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF32013 - 2.2e-06 27.9 0.0 0.046 14.1 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) RFX1_trans_act PF04589.13 ORF31997 - 0.069 13.3 0.4 0.086 13.0 0.4 1.1 1 0 0 1 1 1 0 RFX1 transcription activation region Gly_kinase PF02595.15 ORF31946 - 1.8e-50 172.0 1.1 2e-50 171.8 1.1 1.0 1 0 0 1 1 1 1 Glycerate kinase family Mlf1IP PF10248.9 ORF31568 - 0.14 12.1 12.5 0.25 11.3 12.4 1.3 1 1 0 1 1 1 0 Myelodysplasia-myeloid leukemia factor 1-interacting protein DUF3340 PF11818.8 ORF31568 - 0.31 11.2 2.7 0.39 10.9 2.7 1.1 1 0 0 1 1 1 0 C-terminal domain of tail specific protease (DUF3340) CH PF00307.31 ORF30385 - 2.9e-18 66.1 0.2 3.6e-14 52.8 0.1 2.1 2 0 0 2 2 2 2 Calponin homology (CH) domain DUF5436 PF17504.2 ORF30385 - 0.016 15.5 0.1 1.5 9.2 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5436) SMP PF04927.12 ORF2924 - 1.9 9.0 7.9 4.1 7.9 0.1 2.5 2 0 0 2 2 2 0 Seed maturation protein DUF4179 PF13786.6 ORF2924 - 2.7 8.5 3.9 13 6.4 1.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4179) SRP1_TIP1 PF00660.17 ORF28733 - 0.094 12.8 0.6 0.16 12.1 0.6 1.4 1 1 0 1 1 1 0 Seripauperin and TIP1 family Arf PF00025.21 ORF27078 - 7.4e-76 253.5 0.1 8.3e-76 253.3 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF27078 - 1.9e-14 53.9 0.0 2.5e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF27078 - 2.8e-13 49.8 0.0 3.1e-13 49.6 0.0 1.0 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF27078 - 3.2e-13 49.5 0.0 3.8e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF27078 - 1.1e-10 41.2 0.4 7.5e-08 31.9 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF27078 - 2.5e-10 40.1 0.0 3.1e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF27078 - 1.1e-05 25.5 0.0 1.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF27078 - 0.013 15.6 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF27078 - 0.038 13.3 0.1 0.066 12.5 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase KAsynt_C_assoc PF16197.5 ORF26270 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF26270 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF26270 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family DUF1647 PF07801.11 ORF25265 - 0.0028 17.4 1.4 0.0035 17.1 1.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1647) LysR_substrate PF03466.20 ORF24204 - 8.8e-31 106.9 0.1 1e-30 106.7 0.1 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Peptidase_A8 PF01252.18 ORF24068 - 1e-37 129.5 8.6 1.2e-37 129.3 8.6 1.0 1 0 0 1 1 1 1 Signal peptidase (SPase) II MscL PF01741.18 ORF24068 - 0.049 13.9 0.1 0.087 13.1 0.1 1.4 1 1 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL ThrE PF06738.12 ORF24068 - 0.84 9.0 5.2 1.3 8.3 5.2 1.4 1 1 0 1 1 1 0 Putative threonine/serine exporter Pentapeptide_2 PF01469.18 ORF23973 - 0.61 10.0 26.6 0.19 11.6 16.8 2.5 1 1 1 2 2 2 0 Pentapeptide repeats (8 copies) DUF192 PF02643.15 ORF22744 - 0.23 11.6 1.0 2.7 8.2 0.3 2.3 1 1 1 2 2 2 0 Uncharacterized ACR, COG1430 Pox_P21 PF05313.12 ORF22744 - 0.37 10.3 19.0 0.15 11.6 16.1 1.7 1 1 1 2 2 2 0 Poxvirus P21 membrane protein Arf PF00025.21 ORF2199 - 7.4e-76 253.5 0.1 8.3e-76 253.3 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF2199 - 1.9e-14 53.9 0.0 2.5e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF2199 - 2.8e-13 49.8 0.0 3.1e-13 49.6 0.0 1.0 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF2199 - 3.2e-13 49.5 0.0 3.8e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF2199 - 1.1e-10 41.2 0.4 7.5e-08 31.9 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF2199 - 2.5e-10 40.1 0.0 3.1e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF2199 - 1.1e-05 25.5 0.0 1.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF2199 - 0.013 15.6 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF2199 - 0.038 13.3 0.1 0.066 12.5 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase SRP_SPB PF02978.19 ORF20161 - 5e-07 30.3 0.1 1.8e-06 28.5 0.0 1.8 2 0 0 2 2 2 1 Signal peptide binding domain Tab2_like PF06485.11 ORF20161 - 0.16 11.4 0.7 0.25 10.8 0.6 1.3 1 1 0 1 1 1 0 RNA-binding protein Tab2/Atab2 Actin PF00022.19 ORF19368 - 2.2e-56 191.3 0.0 2.4e-56 191.1 0.0 1.0 1 0 0 1 1 1 1 Actin Arf PF00025.21 ORF18652 - 7.4e-76 253.5 0.1 8.3e-76 253.3 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF18652 - 1.9e-14 53.9 0.0 2.5e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF18652 - 2.8e-13 49.8 0.0 3.1e-13 49.6 0.0 1.0 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF18652 - 3.2e-13 49.5 0.0 3.8e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF18652 - 1.1e-10 41.2 0.4 7.5e-08 31.9 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF18652 - 2.5e-10 40.1 0.0 3.1e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF18652 - 1.1e-05 25.5 0.0 1.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF18652 - 0.013 15.6 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF18652 - 0.038 13.3 0.1 0.066 12.5 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Lebercilin PF15619.6 ORF16524 - 0.0074 16.0 0.8 0.0074 16.0 0.8 2.0 1 1 1 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease V_ATPase_I PF01496.19 ORF16524 - 0.072 11.0 4.9 0.088 10.7 4.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MCU PF04678.13 ORF16524 - 0.17 12.0 1.8 0.21 11.7 1.8 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter Borrelia_P83 PF05262.11 ORF16524 - 0.31 9.5 10.8 0.34 9.3 10.8 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF4140 PF13600.6 ORF16524 - 0.42 11.1 5.6 11 6.5 0.1 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) BST2 PF16716.5 ORF16524 - 3.9 8.1 7.2 5.5 7.7 0.2 2.2 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 ATP-synt_C PF00137.21 ORF16258 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C Adaptin_N PF01602.20 ORF14324 - 0.012 14.2 0.0 0.015 13.9 0.0 1.2 1 0 0 1 1 1 0 Adaptin N terminal region MMS19_N PF14500.6 ORF14324 - 0.083 12.5 0.1 0.25 10.9 0.0 1.4 1 1 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Ribosomal_L11_N PF03946.14 ORF1326 - 2.4e-17 62.5 1.2 4.3e-17 61.7 1.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF1326 - 2.2e-15 56.9 0.1 3.7e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Blt1_C PF17183.4 ORF12605 - 0.096 12.3 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Get5 carboxyl domain DUF2894 PF11445.8 ORF12096 - 0.077 13.5 0.1 0.09 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) Selenoprotein_S PF06936.11 ORF12096 - 0.15 11.9 5.5 0.18 11.6 5.5 1.2 1 0 0 1 1 1 0 Selenoprotein S (SelS) SWI-SNF_Ssr4 PF08549.10 ORF12096 - 0.61 8.7 4.7 0.68 8.5 4.7 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) Phage_HK97_TLTM PF06120.11 ORF12096 - 2.5 7.2 11.8 2.5 7.2 10.7 1.5 1 1 1 2 2 2 0 Tail length tape measure protein DUF1640 PF07798.11 ORF12096 - 6.4 6.8 13.3 11 6.1 9.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) CIA30 PF08547.12 ORF11947 - 3.1e-15 56.5 0.0 3.6e-15 56.4 0.0 1.0 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) HlyD PF00529.20 ORF11940 - 5.6e-09 35.8 1.0 8e-09 35.3 1.0 1.4 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS HlyD_D23 PF16576.5 ORF11940 - 1.5e-08 34.1 0.0 2.2e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 ORF11940 - 0.00018 22.2 0.2 0.00045 20.9 0.0 1.7 2 1 0 2 2 2 1 HlyD family secretion protein Big_1 PF02369.16 ORF11940 - 0.039 13.9 0.1 0.099 12.7 0.1 1.7 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) POTRA_3 PF17287.2 ORF11940 - 0.11 12.0 0.0 12 5.5 0.0 2.4 2 0 0 2 2 2 0 POTRA domain YbbR PF07949.12 ORF112425 - 0.015 15.7 0.6 0.043 14.2 0.6 1.9 1 0 0 1 1 1 0 YbbR-like protein SlyX PF04102.12 ORF112425 - 0.073 13.7 7.3 0.53 10.9 0.5 2.4 2 0 0 2 2 2 0 SlyX DUF5082 PF16888.5 ORF112425 - 0.11 12.8 16.7 0.43 10.9 6.9 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) MscS_porin PF12795.7 ORF112425 - 0.13 11.8 12.3 1.9 8.0 12.3 2.1 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain HR1 PF02185.16 ORF112425 - 0.15 12.2 9.4 0.28 11.3 0.3 3.1 2 1 1 3 3 3 0 Hr1 repeat XhlA PF10779.9 ORF112425 - 1.1 9.6 19.8 1.7 8.9 3.2 3.1 2 1 2 4 4 4 0 Haemolysin XhlA FlxA PF14282.6 ORF112425 - 1.6 8.7 19.0 5.5 7.0 0.5 3.0 2 1 0 2 2 2 0 FlxA-like protein Ribonuclease_T2 PF00445.18 ORF112254 - 3.5e-22 79.5 1.1 4.7e-22 79.1 1.1 1.1 1 0 0 1 1 1 1 Ribonuclease T2 family SMP PF04927.12 ORF111540 - 1.9 9.0 7.9 4.1 7.9 0.1 2.5 2 0 0 2 2 2 0 Seed maturation protein DUF4179 PF13786.6 ORF111540 - 2.7 8.5 3.9 13 6.4 1.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4179) Ribosomal_S3Ae PF01015.18 ORF111383 - 2.9e-48 164.1 8.1 3.4e-48 163.9 8.1 1.1 1 0 0 1 1 1 1 Ribosomal S3Ae family Phage_fiber_C PF06820.12 ORF111383 - 0.15 12.4 0.2 0.93 9.9 0.0 2.2 2 0 0 2 2 2 0 Putative prophage tail fibre C-terminus Mito_carr PF00153.27 ORF110675 - 9.2e-27 92.8 0.1 4.8e-15 55.2 0.1 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein Ribosomal_S14 PF00253.21 ORF108987 - 0.059 13.1 3.3 0.15 11.9 3.3 1.7 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e PEN-2 PF10251.9 ORF108863 - 0.98 9.9 8.5 0.93 9.9 1.9 2.2 2 0 0 2 2 2 0 Presenilin enhancer-2 subunit of gamma secretase TMEM154 PF15102.6 ORF108863 - 3 7.7 6.0 1.7 8.6 0.1 2.2 2 0 0 2 2 2 0 TMEM154 protein family Alpha-mann_mid PF09261.11 ORF107799 - 0.0021 18.2 0.0 0.0052 16.9 0.0 1.7 2 0 0 2 2 2 1 Alpha mannosidase middle domain Latarcin PF10279.9 ORF107138 - 0.0054 17.1 1.6 0.011 16.2 1.6 1.5 1 0 0 1 1 1 1 Latarcin precursor CobT PF06213.12 ORF107138 - 0.011 15.1 2.7 0.016 14.6 2.7 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Vma12 PF11712.8 ORF107138 - 0.014 15.5 1.0 0.017 15.2 1.0 1.2 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Sec3_C PF09763.9 ORF107138 - 0.036 12.5 7.3 0.045 12.1 7.3 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec3 Presenilin PF01080.17 ORF107138 - 1 8.1 3.7 1 8.0 3.7 1.1 1 0 0 1 1 1 0 Presenilin MAP17 PF15807.5 ORF107138 - 5.5 7.3 8.7 8.7 6.6 8.7 1.3 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Dzip-like_N PF13815.6 ORF107138 - 9.4 6.2 10.2 1.2 9.1 4.4 2.3 1 1 1 3 3 3 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal KAsynt_C_assoc PF16197.5 ORF106473 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF106473 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF106473 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family PCP PF02429.15 ORF106439 - 5.3e-56 189.0 8.5 6.4e-56 188.7 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein TSC22 PF01166.18 ORF105612 - 3.3 8.1 7.3 0.73 10.2 2.9 2.0 2 0 0 2 2 2 0 TSC-22/dip/bun family Arf PF00025.21 ORF104752 - 7.4e-76 253.5 0.1 8.3e-76 253.3 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF104752 - 1.9e-14 53.9 0.0 2.5e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF104752 - 2.8e-13 49.8 0.0 3.1e-13 49.6 0.0 1.0 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF104752 - 3.2e-13 49.5 0.0 3.8e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF104752 - 1.1e-10 41.2 0.4 7.5e-08 31.9 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF104752 - 2.5e-10 40.1 0.0 3.1e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF104752 - 1.1e-05 25.5 0.0 1.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF104752 - 0.013 15.6 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF104752 - 0.038 13.3 0.1 0.066 12.5 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase APG17 PF04108.12 ORF104165 - 0.078 12.1 0.0 0.093 11.8 0.0 1.1 1 0 0 1 1 1 0 Autophagy protein Apg17 Actin PF00022.19 ORF104056 - 2.2e-56 191.3 0.0 2.4e-56 191.1 0.0 1.0 1 0 0 1 1 1 1 Actin DSPc PF00782.20 ORF101454 - 0.015 15.1 0.0 0.02 14.7 0.0 1.2 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain DUF4224 PF13986.6 ORF101454 - 0.069 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4224) GpcrRhopsn4 PF10192.9 ORF100348 - 8.8e-24 84.3 9.6 1e-23 84.1 9.6 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain DUF1129 PF06570.11 ORF100348 - 3.1e-05 23.6 2.7 4e-05 23.2 2.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) AA_permease_2 PF13520.6 ORF100348 - 0.0002 20.3 2.2 0.00024 20.1 2.2 1.1 1 0 0 1 1 1 1 Amino acid permease DUF3290 PF11694.8 ORF100348 - 0.0047 16.9 0.5 0.0047 16.9 0.5 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF3290) Serinc PF03348.15 ORF100348 - 0.0088 15.0 1.8 0.011 14.7 1.8 1.1 1 0 0 1 1 1 1 Serine incorporator (Serinc) DUF1282 PF06930.12 ORF100348 - 0.021 14.6 7.3 0.035 13.9 7.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1282) DUF4191 PF13829.6 ORF100348 - 0.14 11.5 0.4 0.24 10.7 0.1 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) DUF2207 PF09972.9 ORF100348 - 0.42 9.3 4.5 1.5 7.5 0.1 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF2162 PF09930.9 ORF100348 - 0.59 9.5 6.3 0.21 11.0 1.2 2.0 1 1 1 2 2 2 0 Predicted transporter (DUF2162) Bac_rhodopsin PF01036.18 ORF100348 - 0.84 9.2 8.9 0.56 9.7 4.7 2.5 1 1 1 2 2 2 0 Bacteriorhodopsin-like protein LAGLIDADG_1 PF00961.19 NODE_41913_length_487_cov_2.252212_g34328_i0reverse_frame_1 - 5.7 8.0 8.0 2.8 9.0 0.9 2.5 1 1 1 2 2 2 0 LAGLIDADG endonuclease LIF_OSM PF01291.17 NODE_41911_length_487_cov_2.305310_g34326_i0forward_frame_1 - 0.023 14.9 0.3 0.028 14.6 0.3 1.1 1 0 0 1 1 1 0 LIF / OSM family Lact_bio_phlase PF09508.10 NODE_41908_length_487_cov_2.973451_g34323_i0reverse_frame_1 - 0.028 12.9 0.4 0.031 12.7 0.4 1.1 1 0 0 1 1 1 0 Lacto-N-biose phosphorylase N-terminal TIM barrel domain PgaD PF13994.6 NODE_41907_length_487_cov_3.871681_g34322_i0forward_frame_1 - 0.26 11.3 2.6 0.43 10.6 2.6 1.3 1 0 0 1 1 1 0 PgaD-like protein AstB PF04996.12 NODE_41906_length_487_cov_4.207965_g34321_i0reverse_frame_1 - 0.25 10.0 0.3 0.3 9.7 0.3 1.1 1 0 0 1 1 1 0 Succinylarginine dihydrolase zinc_ribbon_4 PF13717.6 NODE_41889_length_487_cov_86.258850_g34304_i0reverse_frame_1 - 0.27 11.2 2.3 0.48 10.4 0.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF2788 PF10981.8 NODE_41881_length_487_cov_105.603982_g34296_i0reverse_frame_1 - 0.031 14.3 2.7 0.031 14.3 2.7 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2788) Staph_opine_DH PF10100.9 NODE_41868_length_487_cov_191.787611_g34283_i0forward_frame_1 - 0.021 13.5 0.0 0.028 13.0 0.0 1.1 1 0 0 1 1 1 0 Staphylopine dehydrogenase SelR PF01641.18 NODE_41863_length_487_cov_412.783186_g34278_i0reverse_frame_1 - 4e-14 52.7 0.2 5.7e-14 52.2 0.2 1.3 1 0 0 1 1 1 1 SelR domain Conotoxin PF02950.17 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.0027 18.7 0.1 0.005 17.8 0.1 1.5 1 0 0 1 1 1 1 Conotoxin EphA2_TM PF14575.6 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.02 15.8 0.4 0.02 15.8 0.4 2.3 2 1 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain WBP-1 PF11669.8 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.027 15.1 1.3 0.027 15.1 1.3 2.0 1 1 1 3 3 3 0 WW domain-binding protein 1 TMEM51 PF15345.6 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.04 13.8 0.9 0.057 13.3 0.9 1.2 1 0 0 1 1 1 0 Transmembrane protein 51 DUF4834 PF16118.5 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.057 14.4 0.6 0.057 14.4 0.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) ECSCR PF15820.5 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.071 12.9 0.7 0.071 12.9 0.7 2.2 3 0 0 3 3 3 0 Endothelial cell-specific chemotaxis regulator FSAP_sig_propep PF03032.15 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.13 12.3 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide Shisa PF13908.6 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.23 11.7 0.9 0.3 11.3 0.4 1.6 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator MLANA PF14991.6 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.98 9.7 3.7 7 7.0 0.5 2.2 1 1 0 2 2 2 0 Protein melan-A CcmD PF04995.14 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.99 9.5 7.6 4.4 7.5 7.6 2.1 1 1 0 1 1 1 0 Heme exporter protein D (CcmD) DUF5313 PF17240.2 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 1.8 9.0 7.1 0.24 11.9 2.8 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5313) HemY_N PF07219.13 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 3.1 8.0 5.5 0.49 10.6 1.0 1.9 2 0 0 2 2 2 0 HemY protein N-terminus TraI_2 PF07514.11 NODE_41850_length_488_cov_2.105960_g34266_i0reverse_frame_1 - 0.027 13.4 1.6 0.035 13.0 1.6 1.1 1 0 0 1 1 1 0 Putative helicase Pkinase PF00069.25 NODE_41845_length_488_cov_3.163355_g34261_i0reverse_frame_1 - 4e-20 72.3 0.0 5.4e-20 71.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_41845_length_488_cov_3.163355_g34261_i0reverse_frame_1 - 7e-08 32.1 0.0 1e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2312 PF10073.9 NODE_41845_length_488_cov_3.163355_g34261_i0reverse_frame_1 - 0.024 14.3 0.0 0.044 13.4 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) HGD-D PF06050.13 NODE_41841_length_488_cov_3.935982_g34257_i0forward_frame_1 - 0.088 12.6 0.0 0.09 12.5 0.0 1.2 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component Ammonium_transp PF00909.21 NODE_41797_length_488_cov_3350.969095_g34217_i0reverse_frame_1 - 5.9e-07 28.5 0.0 7.7e-07 28.1 0.0 1.2 1 0 0 1 1 1 1 Ammonium Transporter Family TPR_14 PF13428.6 NODE_41787_length_489_cov_2.535242_g34210_i0reverse_frame_1 - 0.0074 17.0 1.5 3.7 8.6 0.1 3.2 2 1 1 3 3 3 2 Tetratricopeptide repeat Saf_2TM PF18303.1 NODE_41786_length_489_cov_2.572687_g34209_i0forward_frame_1 - 2.3 7.8 5.0 7.5 6.1 0.2 2.4 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain DUF1474 PF07342.11 NODE_41784_length_489_cov_2.700441_g34207_i0reverse_frame_1 - 0.65 10.6 6.2 0.75 10.3 3.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1474) Beach PF02138.18 NODE_41780_length_489_cov_3.444934_g34203_i0reverse_frame_1 - 8.7e-45 153.2 0.0 9.9e-45 153.0 0.0 1.0 1 0 0 1 1 1 1 Beige/BEACH domain PK PF00224.21 NODE_41779_length_489_cov_3.511013_g34202_i0forward_frame_1 - 8.7e-49 166.3 0.8 9.7e-49 166.1 0.8 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain Cupin_6 PF12852.7 NODE_41776_length_489_cov_39.079295_g34199_i0reverse_frame_1 - 0.041 13.6 0.0 0.15 11.8 0.0 1.7 2 0 0 2 2 2 0 Cupin DUF4199 PF13858.6 NODE_41774_length_489_cov_51.951542_g34197_i0forward_frame_1 - 2.1 8.7 15.9 4.2 7.7 15.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) Synaptobrevin PF00957.21 NODE_41772_length_489_cov_61.645374_g34195_i0reverse_frame_1 - 0.22 11.3 2.6 0.45 10.3 0.2 2.0 2 0 0 2 2 2 0 Synaptobrevin SURF6 PF04935.12 NODE_41769_length_489_cov_70.746696_g34192_i0reverse_frame_1 - 2.1e-18 66.9 33.0 2.7e-18 66.5 33.0 1.2 1 0 0 1 1 1 1 Surfeit locus protein 6 Ank_5 PF13857.6 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 5.5e-25 87.1 0.1 2.5e-12 46.8 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 1.4e-23 83.0 0.1 2.5e-08 34.3 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 4.6e-20 72.0 1.0 2.1e-19 69.9 0.3 2.1 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 2.6e-17 62.4 0.3 1.2e-06 28.7 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 2.1e-13 49.1 0.1 6.7e-05 23.0 0.0 3.6 4 0 0 4 4 4 2 Ankyrin repeat MORN PF02493.20 NODE_41757_length_489_cov_125.068282_g34180_i0forward_frame_1 - 4.2e-14 51.5 13.2 1.6e-07 30.8 0.3 4.5 5 0 0 5 5 5 2 MORN repeat PATR PF12951.7 NODE_41757_length_489_cov_125.068282_g34180_i0forward_frame_1 - 0.08 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Passenger-associated-transport-repeat Chordopox_A30L PF06015.12 NODE_41755_length_489_cov_156.722467_g34178_i0forward_frame_1 - 0.7 9.8 7.3 1.7 8.6 7.2 1.8 1 1 0 1 1 1 0 Chordopoxvirus A30L protein STAT6_C PF14596.6 NODE_41744_length_489_cov_842.894273_g34168_i0reverse_frame_1 - 0.078 13.0 1.6 0.12 12.4 1.4 1.3 1 1 0 1 1 1 0 STAT6 C-terminal Apocytochr_F_C PF01333.19 NODE_41739_length_489_cov_3167.072687_g34164_i0reverse_frame_1 - 1.9e-35 121.5 0.1 2.4e-35 121.1 0.1 1.1 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF5006 PF16397.5 NODE_41739_length_489_cov_3167.072687_g34164_i0reverse_frame_1 - 0.00027 20.2 0.1 0.00034 19.9 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5006) RnfC_N PF13375.6 NODE_41739_length_489_cov_3167.072687_g34164_i0reverse_frame_1 - 0.058 13.4 0.3 2.5 8.1 0.1 2.2 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain Ammonium_transp PF00909.21 NODE_41738_length_489_cov_3437.466960_g34163_i0reverse_frame_1 - 6.2e-07 28.5 0.0 9e-07 27.9 0.0 1.3 1 0 0 1 1 1 1 Ammonium Transporter Family DGF-1_C PF11040.8 NODE_41736_length_489_cov_4092.724670_g25447_i4forward_frame_1 - 4.8 7.3 9.1 12 6.0 9.1 1.8 1 1 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus Rieske PF00355.26 NODE_41735_length_489_cov_5133.367841_g34161_i0forward_frame_1 - 7.9e-13 48.2 0.1 1.1e-12 47.7 0.1 1.2 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain CytB6-F_Fe-S PF08802.10 NODE_41735_length_489_cov_5133.367841_g34161_i0forward_frame_1 - 1.5e-06 28.1 1.2 2.7e-06 27.3 1.2 1.5 1 0 0 1 1 1 1 Cytochrome B6-F complex Fe-S subunit Presenilin PF01080.17 NODE_41726_length_490_cov_23.092308_g34152_i0reverse_frame_2 - 0.38 9.5 3.1 0.48 9.1 3.1 1.1 1 0 0 1 1 1 0 Presenilin Noelin-1 PF12308.8 NODE_41724_length_490_cov_42.529670_g34150_i0reverse_frame_3 - 0.18 11.8 0.2 0.24 11.4 0.2 1.2 1 0 0 1 1 1 0 Neurogenesis glycoprotein ANAPC4_WD40 PF12894.7 NODE_41724_length_490_cov_42.529670_g34150_i0forward_frame_2 - 0.0022 18.3 0.1 3.6 8.0 0.0 2.5 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 NODE_41724_length_490_cov_42.529670_g34150_i0forward_frame_2 - 0.0032 18.3 0.1 0.05 14.5 0.0 2.4 2 0 0 2 2 2 1 WD domain, G-beta repeat WD40_3 PF15911.5 NODE_41724_length_490_cov_42.529670_g34150_i0forward_frame_2 - 0.13 12.3 0.0 0.68 10.0 0.0 2.0 2 0 0 2 2 2 0 WD domain, G-beta repeat FrhB_FdhB_C PF04432.13 NODE_41715_length_490_cov_81.345055_g34141_i0reverse_frame_2 - 0.13 12.0 0.3 0.2 11.4 0.3 1.2 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus DUF2164 PF09932.9 NODE_41715_length_490_cov_81.345055_g34141_i0forward_frame_3 - 0.045 13.8 0.0 0.14 12.2 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2164) DUF4644 PF15486.6 NODE_41706_length_490_cov_108.984615_g34132_i0reverse_frame_3 - 0.12 12.1 0.3 0.17 11.6 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4644) ADK PF00406.22 NODE_41700_length_490_cov_126.175824_g34126_i0reverse_frame_3 - 1.5e-07 31.6 0.0 1.9e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 NODE_41700_length_490_cov_126.175824_g34126_i0reverse_frame_3 - 0.00012 22.5 0.0 0.00017 22.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_41700_length_490_cov_126.175824_g34126_i0reverse_frame_3 - 0.12 12.7 0.0 1.2 9.6 0.0 1.9 1 1 1 2 2 2 0 AAA ATPase domain DUF4768 PF15989.5 NODE_41679_length_491_cov_1.427632_g34109_i0reverse_frame_2 - 0.05 13.5 0.1 0.11 12.4 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) Actin PF00022.19 NODE_41678_length_491_cov_1.603070_g34108_i0reverse_frame_3 - 2.8e-42 144.8 0.2 4.2e-41 140.9 0.2 1.9 1 1 0 1 1 1 1 Actin Wyosine_form PF08608.12 NODE_41678_length_491_cov_1.603070_g34108_i0reverse_frame_3 - 0.11 12.9 0.1 0.2 12.1 0.1 1.4 1 0 0 1 1 1 0 Wyosine base formation DUF5057 PF16480.5 NODE_41676_length_491_cov_1.925439_g34106_i0reverse_frame_2 - 0.015 14.7 0.2 0.021 14.2 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5057) Peptidase_M3 PF01432.20 NODE_41674_length_491_cov_2.307018_g34104_i0forward_frame_2 - 5.6e-49 167.6 0.0 6.2e-49 167.5 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 GATase_7 PF13537.6 NODE_41671_length_491_cov_3.989035_g34101_i0reverse_frame_3 - 2.8e-12 46.6 0.0 3.8e-12 46.2 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 NODE_41671_length_491_cov_3.989035_g34101_i0reverse_frame_3 - 2.2e-09 37.6 0.0 3.8e-09 36.8 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 NODE_41671_length_491_cov_3.989035_g34101_i0reverse_frame_3 - 0.16 10.9 0.0 0.16 10.8 0.0 1.3 1 1 0 1 1 1 0 Glutamine amidotransferases class-II DUF962 PF06127.11 NODE_41668_length_491_cov_42.070175_g34098_i0forward_frame_2 - 0.12 12.5 1.6 0.51 10.5 1.6 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF962) Fumarate_red_C PF02300.17 NODE_41666_length_491_cov_56.311404_g34096_i0forward_frame_3 - 0.24 11.5 3.6 4.9 7.3 0.4 2.7 2 1 1 3 3 3 0 Fumarate reductase subunit C DUF3708 PF12501.8 NODE_41656_length_491_cov_85.629386_g34086_i0reverse_frame_3 - 0.18 11.6 1.7 0.17 11.6 0.6 1.5 1 1 0 1 1 1 0 Phosphate ATP-binding cassette transporter Baculo_PP31 PF05311.11 NODE_41656_length_491_cov_85.629386_g34086_i0reverse_frame_3 - 0.45 10.0 4.0 0.15 11.6 0.9 1.7 2 0 0 2 2 2 0 Baculovirus 33KDa late protein (PP31) AvrB_AvrC PF05394.11 NODE_41655_length_491_cov_87.949561_g34085_i0reverse_frame_3 - 0.00036 19.9 0.2 0.0042 16.3 0.1 2.5 1 1 1 2 2 2 1 Avirulence protein PaO PF08417.12 NODE_41655_length_491_cov_87.949561_g34085_i0forward_frame_3 - 0.0013 18.8 0.1 0.0021 18.2 0.1 1.3 1 0 0 1 1 1 1 Pheophorbide a oxygenase TPT PF03151.16 NODE_41652_length_491_cov_99.100877_g34082_i0forward_frame_2 - 3.3e-14 52.9 3.0 4.4e-14 52.5 3.0 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family UAA PF08449.11 NODE_41652_length_491_cov_99.100877_g34082_i0forward_frame_2 - 0.00025 20.4 3.6 0.00031 20.0 3.6 1.1 1 0 0 1 1 1 1 UAA transporter family Peptidase_C16 PF01831.17 NODE_41652_length_491_cov_99.100877_g34082_i0forward_frame_2 - 0.036 13.8 0.1 0.043 13.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase C16 family EamA PF00892.20 NODE_41652_length_491_cov_99.100877_g34082_i0forward_frame_2 - 0.05 13.8 4.2 0.071 13.3 4.2 1.2 1 0 0 1 1 1 0 EamA-like transporter family DUF2509 PF10713.9 NODE_41637_length_491_cov_253.769737_g34067_i0reverse_frame_2 - 0.029 14.5 0.4 0.04 14.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2509) Spec3 PF15795.5 NODE_41635_length_491_cov_303.780702_g34065_i0reverse_frame_3 - 4.2e-10 40.0 13.8 3e-08 34.1 13.8 2.2 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein eIF3_subunit PF08597.10 NODE_41634_length_491_cov_313.640351_g34064_i0forward_frame_3 - 0.0048 16.8 4.2 0.0074 16.2 4.2 1.2 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit Tctex-1 PF03645.13 NODE_41625_length_491_cov_3486.309211_g34058_i0reverse_frame_3 - 1.3e-21 76.8 2.0 1.8e-21 76.3 2.0 1.2 1 0 0 1 1 1 1 Tctex-1 family Baculo_PEP_C PF04513.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 2e-05 24.6 7.4 0.033 14.2 0.6 2.8 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus Syntaxin_2 PF14523.6 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 2.5e-05 24.6 21.4 0.0025 18.1 8.3 3.0 1 1 2 3 3 3 2 Syntaxin-like protein Apolipoprotein PF01442.18 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.00055 19.9 4.0 0.0052 16.7 2.4 1.9 1 1 1 2 2 2 1 Apolipoprotein A1/A4/E domain DUF883 PF05957.13 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.00065 20.2 1.3 6.2 7.5 0.0 3.2 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF5082 PF16888.5 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.0032 17.8 19.9 0.12 12.6 14.6 2.4 1 1 1 2 2 2 2 Domain of unknown function (DUF5082) FH2 PF02181.23 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.0054 15.9 8.7 1.1 8.4 6.4 2.2 1 1 0 2 2 2 2 Formin Homology 2 Domain FlxA PF14282.6 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.0078 16.2 5.7 0.0078 16.2 5.7 3.4 1 1 2 3 3 3 1 FlxA-like protein Syntaxin-6_N PF09177.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.018 15.6 7.7 1 10.0 5.0 3.0 1 1 2 3 3 3 0 Syntaxin 6, N-terminal Fib_alpha PF08702.10 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.02 15.1 17.3 0.41 10.8 10.1 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Phage_GPO PF05929.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.02 14.5 6.5 0.024 14.3 6.5 1.3 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase KxDL PF10241.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.021 15.1 10.8 0.073 13.3 0.1 2.8 1 1 1 2 2 2 0 Uncharacterized conserved protein Spc7 PF08317.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.029 13.2 16.4 0.18 10.6 14.8 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein TMP_2 PF06791.13 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.03 14.0 0.4 0.055 13.1 0.2 1.6 1 1 1 2 2 2 0 Prophage tail length tape measure protein Lectin_N PF03954.14 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.046 13.5 6.0 1.4 8.6 2.6 2.4 1 1 0 2 2 2 0 Hepatic lectin, N-terminal domain DUF2397 PF09660.10 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.047 12.6 0.3 0.12 11.2 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2397) Syntaxin PF00804.25 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.059 13.0 15.8 0.086 12.5 13.0 2.3 1 1 1 2 2 2 0 Syntaxin SpecificRecomb PF10136.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.065 11.5 0.9 0.063 11.6 0.9 1.1 1 0 0 1 1 1 0 Site-specific recombinase DUF948 PF06103.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.083 13.2 11.3 0.33 11.3 0.5 3.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Exonuc_VII_L PF02601.15 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.089 12.3 7.7 0.13 11.8 7.7 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit ApoLp-III PF07464.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.12 12.5 17.1 1.1 9.4 17.1 2.3 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Prominin PF05478.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.12 10.3 12.4 0.15 10.0 12.4 1.1 1 0 0 1 1 1 0 Prominin Allexi_40kDa PF05549.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.17 11.4 9.1 0.084 12.4 1.6 2.0 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF848 PF05852.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.17 12.0 10.5 0.25 11.5 0.2 2.6 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) DLP_helical PF18709.1 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.2 10.8 13.3 0.42 9.8 6.7 2.1 1 1 1 2 2 2 0 Dynamin-like helical domain COG2 PF06148.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.21 11.7 9.0 0.25 11.4 2.5 2.9 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Alpha-E PF04168.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.27 11.0 1.5 3.2 7.4 1.5 2.0 1 1 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. ING PF12998.7 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.28 11.8 13.0 2.2 8.9 2.2 2.9 1 1 2 3 3 3 0 Inhibitor of growth proteins N-terminal histone-binding TMPIT PF07851.13 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.29 10.3 14.2 0.32 10.2 12.3 1.8 1 1 1 2 2 2 0 TMPIT-like protein HMMR_N PF15905.5 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.32 10.4 18.3 0.14 11.6 7.9 2.1 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal HsbA PF12296.8 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.37 11.2 9.9 4.4 7.7 6.3 2.9 2 1 0 2 2 2 0 Hydrophobic surface binding protein A ApoO PF09769.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.39 10.7 4.8 2.2 8.2 1.3 2.8 1 1 1 2 2 2 0 Apolipoprotein O Atg14 PF10186.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.4 9.7 11.0 0.47 9.5 11.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CREPT PF16566.5 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.45 10.7 9.0 13 6.0 6.6 2.2 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Fzo_mitofusin PF04799.13 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.47 10.0 12.6 5 6.7 0.3 3.1 1 1 1 3 3 3 0 fzo-like conserved region V-ATPase_G PF03179.15 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.7 10.5 15.4 3.4 8.2 4.7 3.1 1 1 2 3 3 3 0 Vacuolar (H+)-ATPase G subunit DUF4407 PF14362.6 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.71 9.2 13.1 0.92 8.8 11.9 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Baculo_F PF12259.8 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.73 8.3 11.3 0.14 10.6 4.6 2.0 1 1 1 2 2 2 0 Baculovirus F protein MLD PF11647.8 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1 9.6 5.9 0.94 9.8 0.1 2.9 2 1 2 4 4 3 0 Membrane Localization Domain SseC PF04888.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.1 8.8 11.1 1.1 8.8 0.5 2.2 1 1 0 2 2 2 0 Secretion system effector C (SseC) like family DUF1512 PF07431.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.2 8.1 9.1 2.4 7.1 7.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1512) ACCA PF03255.14 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.3 8.9 13.0 1.8 8.5 4.7 2.7 1 1 2 3 3 3 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Phlebovirus_NSM PF07246.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.7 8.0 15.1 2.8 7.2 14.7 1.4 1 1 0 1 1 1 0 Phlebovirus nonstructural protein NS-M YtxH PF12732.7 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.7 9.2 9.5 3.5e+02 1.8 9.5 2.7 1 1 0 1 1 1 0 YtxH-like protein DUF1515 PF07439.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.9 8.6 7.2 1.4 8.9 3.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) DUF1451 PF07295.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 2.2 8.3 8.0 1.5 8.8 1.9 2.2 1 1 2 3 3 3 0 Zinc-ribbon containing domain DUF4208 PF13907.6 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 3.7 8.0 8.8 2.6e+02 2.1 8.2 2.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4208) YojJ PF10372.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 4.9 7.3 10.7 13 6.0 1.4 3.8 1 1 4 5 5 5 0 Bacterial membrane-spanning protein N-terminus AI-2E_transport PF01594.16 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 6.8 5.7 4.4 4.9 6.2 1.2 1.9 1 1 0 2 2 2 0 AI-2E family transporter DUF2203 PF09969.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 7.1 7.4 10.2 14 6.4 1.7 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Iron_permease PF04120.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 7.2 6.4 8.3 1.5 8.6 1.2 2.4 1 1 1 2 2 2 0 Low affinity iron permease ESM4 PF15952.5 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 7.7 6.9 13.1 26 5.2 12.9 1.9 1 1 0 1 1 1 0 Enhancer of split M4 family DUF5595 PF18077.1 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 9.3 6.4 10.7 6.3 7.0 0.5 3.7 2 1 3 5 5 5 0 Domain of unknown function (DUF5595) CLAMP PF14769.6 NODE_41623_length_492_cov_2.175055_g34056_i0forward_frame_3 - 0.37 11.3 5.3 0.14 12.6 1.4 2.0 2 0 0 2 2 2 0 Flagellar C1a complex subunit C1a-32 Trp_leader1 PF08055.11 NODE_41620_length_492_cov_2.448578_g34053_i0reverse_frame_3 - 0.011 15.4 0.5 0.019 14.7 0.5 1.3 1 0 0 1 1 1 0 Tryptophan leader peptide TMEM132D_C PF15706.5 NODE_41614_length_492_cov_2.954048_g34047_i0reverse_frame_2 - 0.014 15.2 2.1 0.056 13.2 0.2 2.5 2 1 1 3 3 3 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF2615 PF11027.8 NODE_41614_length_492_cov_2.954048_g34047_i0reverse_frame_2 - 0.059 13.5 0.2 0.12 12.5 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2615) DUF5385 PF17359.2 NODE_41614_length_492_cov_2.954048_g34047_i0reverse_frame_2 - 0.08 12.5 0.6 0.11 12.0 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5385) p53-inducible11 PF14936.6 NODE_41614_length_492_cov_2.954048_g34047_i0reverse_frame_2 - 0.094 12.8 1.5 0.18 11.8 1.5 1.5 1 1 0 1 1 1 0 Tumour protein p53-inducible protein 11 NADH_dehy_S2_C PF06444.11 NODE_41614_length_492_cov_2.954048_g34047_i0reverse_frame_2 - 0.11 13.1 2.4 0.11 13.1 0.4 2.0 2 0 0 2 2 2 0 NADH dehydrogenase subunit 2 C-terminus DBI_PRT PF02277.17 NODE_41612_length_492_cov_3.045952_g34045_i0forward_frame_3 - 1.4e-50 172.4 3.4 1.5e-50 172.3 3.4 1.0 1 0 0 1 1 1 1 Phosphoribosyltransferase GIT_CC PF16559.5 NODE_41611_length_492_cov_3.155361_g34044_i0reverse_frame_2 - 0.1 12.5 0.5 0.15 11.9 0.5 1.2 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks132.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks132.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks132.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks132.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:49:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SNURF PF07192.11 NODE_41610_length_492_cov_3.347921_g34043_i0forward_frame_2 - 0.093 12.6 0.0 0.21 11.5 0.0 1.5 1 1 1 2 2 2 0 SNURF/RPN4 protein DUF295 PF03478.18 NODE_41608_length_492_cov_3.448578_g34041_i0reverse_frame_2 - 0.36 10.4 10.3 0.87 9.2 0.0 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF295) Kelch_1 PF01344.25 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 7.2e-27 92.7 1.2 7e-11 41.5 0.0 3.8 4 0 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 2e-23 81.8 0.2 6.9e-09 35.7 0.0 3.4 3 1 1 4 4 4 3 Kelch motif Kelch_4 PF13418.6 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 1.5e-22 79.3 0.7 1.8e-07 31.1 0.0 3.8 3 1 1 4 4 4 3 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 8.4e-18 64.2 0.0 2.4e-07 30.9 0.0 3.2 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 1.6e-11 43.7 0.2 2.4e-05 24.1 0.0 3.3 3 0 0 3 3 3 2 Kelch motif Kelch_5 PF13854.6 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 3.6e-09 36.4 0.2 0.0073 16.3 0.0 3.3 3 0 0 3 3 3 3 Kelch motif TTL PF03133.15 NODE_41607_length_492_cov_3.849015_g34040_i0forward_frame_3 - 9.4e-10 38.1 0.1 1.3e-09 37.6 0.1 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_ST PF14397.6 NODE_41607_length_492_cov_3.849015_g34040_i0forward_frame_3 - 0.014 14.7 0.0 0.017 14.4 0.0 1.1 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 NODE_41607_length_492_cov_3.849015_g34040_i0forward_frame_3 - 0.056 12.7 0.0 0.075 12.3 0.0 1.2 1 0 0 1 1 1 0 YheC/D like ATP-grasp GSH-S_ATP PF02955.16 NODE_41607_length_492_cov_3.849015_g34040_i0forward_frame_3 - 0.14 11.6 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain Fe-ADH PF00465.19 NODE_41605_length_492_cov_4.113786_g34038_i0forward_frame_3 - 2.6e-14 52.8 0.0 3.1e-14 52.6 0.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase HTH_AsnC-type PF13404.6 NODE_41605_length_492_cov_4.113786_g34038_i0forward_frame_3 - 0.022 14.6 0.0 0.039 13.8 0.0 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain DUF4158 PF13700.6 NODE_41605_length_492_cov_4.113786_g34038_i0forward_frame_3 - 0.069 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) UPF0220 PF05255.11 NODE_41604_length_492_cov_4.304158_g34037_i0forward_frame_3 - 0.0086 15.6 0.7 0.014 14.9 0.7 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0220) 2TM PF13239.6 NODE_41604_length_492_cov_4.304158_g34037_i0forward_frame_3 - 0.01 16.1 1.0 0.02 15.2 1.0 1.6 1 0 0 1 1 1 0 2TM domain Urocanase PF01175.18 NODE_41603_length_492_cov_4.540481_g34036_i0reverse_frame_3 - 0.096 12.3 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Urocanase Rossmann-like domain PRK PF00485.18 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.093 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.12 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.1 11.9 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.13 12.5 0.0 0.31 11.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain CoaE PF01121.20 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.14 11.8 0.1 0.29 10.8 0.1 1.5 1 0 0 1 1 1 0 Dephospho-CoA kinase AAA_18 PF13238.6 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.16 12.5 0.0 0.36 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain Myb_DNA-bind_3 PF12776.7 NODE_41594_length_492_cov_62.266958_g34027_i0forward_frame_2 - 0.022 15.7 0.7 0.041 14.9 0.7 1.5 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain CCDC32 PF14989.6 NODE_41592_length_492_cov_66.199125_g34025_i0forward_frame_2 - 0.092 12.7 3.1 0.16 12.0 2.5 1.6 1 1 1 2 2 2 0 Coiled-coil domain containing 32 RCDG1 PF15725.5 NODE_41576_length_492_cov_121.890591_g34009_i0reverse_frame_3 - 0.16 12.4 0.1 0.16 12.4 0.1 2.5 1 1 1 2 2 2 0 Renal cancer differentiation gene 1 protein FGFR3_TM PF18123.1 NODE_41569_length_492_cov_168.393873_g34002_i0forward_frame_2 - 3.2 7.4 16.9 3.6 7.2 1.0 3.3 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain TFIID_20kDa PF03847.13 NODE_41555_length_492_cov_2587.413567_g33990_i0forward_frame_3 - 2.8e-12 46.9 0.2 4.4e-12 46.3 0.2 1.3 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Histone PF00125.24 NODE_41555_length_492_cov_2587.413567_g33990_i0forward_frame_3 - 0.00079 19.8 0.0 0.0016 18.8 0.0 1.5 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 MCM_lid PF17855.1 NODE_41555_length_492_cov_2587.413567_g33990_i0forward_frame_3 - 0.021 15.2 0.0 0.039 14.4 0.0 1.4 1 0 0 1 1 1 0 MCM AAA-lid domain MFS_1 PF07690.16 ORF99799 - 3e-17 62.6 16.4 3.4e-17 62.4 16.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF99799 - 6.6e-06 25.2 10.9 8.3e-06 24.9 10.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 ORF99799 - 3e-05 23.0 12.3 3.3e-05 22.9 12.3 1.0 1 0 0 1 1 1 1 MFS_1 like family DUF2070 PF09843.9 ORF99799 - 0.23 9.7 7.0 0.25 9.6 7.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Vut_1 PF02592.15 ORF99799 - 1.4 9.3 10.0 0.19 12.1 4.8 1.9 1 1 1 2 2 2 0 Putative vitamin uptake transporter DUF1298 PF06974.13 ORF9948 - 3e-09 37.0 0.0 3.8e-09 36.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Endonuclease_5 PF04493.14 ORF9849 - 4.4e-24 85.3 0.0 4.7e-24 85.2 0.0 1.1 1 0 0 1 1 1 1 Endonuclease V DUF2715 PF10895.8 ORF9715 - 0.03 13.9 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) Lentivirus_VIF PF05851.11 ORF96900 - 0.26 10.2 9.4 0.054 12.4 3.3 2.0 1 1 0 2 2 2 0 Lentivirus virion infectivity factor (VIF) CarbpepA_inh PF02977.15 ORF96900 - 0.63 9.9 8.3 12 5.8 0.6 3.5 3 0 0 3 3 3 0 Carboxypeptidase A inhibitor zf-P11 PF03854.14 ORF96900 - 0.65 9.7 8.4 3.1 7.5 0.3 3.7 4 0 0 4 4 4 0 P-11 zinc finger DegT_DnrJ_EryC1 PF01041.17 ORF96749 - 3.3e-14 53.0 0.0 3.9e-14 52.8 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 ORF96749 - 0.033 12.7 0.1 0.039 12.5 0.1 1.0 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme CEP19 PF14933.6 ORF96648 - 0.11 12.8 4.0 0.19 12.1 4.0 1.4 1 1 0 1 1 1 0 CEP19-like protein zf-CCHC PF00098.23 ORF94730 - 9.3e-07 28.7 2.1 2e-06 27.6 2.1 1.6 1 0 0 1 1 1 1 Zinc knuckle eIF3g PF12353.8 ORF94730 - 0.0025 18.2 6.2 0.0059 17.0 6.2 1.8 1 1 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit G zf-CCHC_6 PF15288.6 ORF94730 - 0.004 17.0 2.1 0.0075 16.1 2.1 1.5 1 0 0 1 1 1 1 Zinc knuckle RICTOR_phospho PF14665.6 ORF94664 - 0.18 12.1 0.1 0.7 10.2 0.0 1.8 2 0 0 2 2 2 0 Rapamycin-insensitive companion of mTOR, phosphorylation-site Sulfate_transp PF00916.20 ORF94251 - 0.002 17.0 2.7 0.0025 16.6 2.7 1.0 1 0 0 1 1 1 1 Sulfate permease family Claudin_3 PF06653.11 ORF94251 - 1.5 8.7 9.2 1.9 8.4 9.2 1.2 1 0 0 1 1 1 0 Tight junction protein, Claudin-like SUR7 PF06687.12 ORF94251 - 3.6 7.2 8.5 4.5 6.8 8.5 1.2 1 0 0 1 1 1 0 SUR7/PalI family DUF1003 PF06210.11 ORF94251 - 4.7 7.4 6.4 0.51 10.5 2.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1003) Aldo_ket_red PF00248.21 ORF93872 - 2.1e-23 83.0 0.1 7.4e-22 77.9 0.1 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family adh_short_C2 PF13561.6 ORF93676 - 2.6e-42 145.0 0.0 2.9e-42 144.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF93676 - 9.1e-29 100.3 0.0 1.1e-28 100.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase CAP PF00188.26 ORF92425 - 4.4e-05 24.3 0.0 6.6e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family PP_kinase_C PF13090.6 ORF91383 - 0.015 14.8 0.6 0.022 14.2 0.4 1.4 1 1 0 1 1 1 0 Polyphosphate kinase C-terminal domain 2 Fis1_TPR_C PF14853.6 ORF90675 - 0.16 12.1 0.6 0.16 12.1 0.6 2.8 3 0 0 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat Rsc14 PF08586.10 ORF90675 - 0.17 12.7 8.6 0.087 13.6 2.5 2.2 1 1 1 2 2 2 0 RSC complex, Rsc14/Ldb7 subunit Asp-B-Hydro_N PF05279.11 ORF90675 - 0.42 10.7 10.7 0.47 10.5 10.7 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Host_attach PF10116.9 ORF9037 - 4.3 7.9 8.6 0.42 11.2 2.5 2.0 1 1 1 2 2 2 0 Protein required for attachment to host cells TctB PF07331.11 ORF88376 - 0.0092 16.2 5.0 0.017 15.4 5.0 1.4 1 1 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family Ost4 PF10215.9 ORF88376 - 0.042 13.7 0.5 0.29 11.0 0.1 2.4 2 0 0 2 2 2 0 Oligosaccaryltransferase TRAPP PF04051.16 ORF85923 - 8.5e-28 96.9 0.1 1e-27 96.7 0.1 1.0 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component Benyvirus_P25 PF05744.11 ORF85880 - 0.062 12.6 0.4 0.062 12.6 0.4 1.6 2 0 0 2 2 2 0 Benyvirus P25/P26 protein GFA PF04828.14 ORF85437 - 1.5e-10 41.2 0.2 2.4e-10 40.6 0.2 1.4 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme ORC6 PF05460.13 ORF84366 - 0.31 10.3 11.9 0.36 10.0 11.9 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Asp-B-Hydro_N PF05279.11 ORF84366 - 1.7 8.7 15.3 2.1 8.4 15.3 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DUF3997 PF13162.6 ORF82864 - 0.1 12.9 0.3 0.31 11.4 0.3 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3997) Prok-RING_4 PF14447.6 ORF82132 - 3.1e-05 23.7 7.3 3.1e-05 23.7 7.3 3.6 3 2 0 3 3 3 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF82132 - 5e-05 23.1 5.9 5e-05 23.1 5.9 4.5 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF82132 - 0.0079 16.0 5.3 0.0079 16.0 5.3 3.6 4 0 0 4 4 4 1 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 ORF82132 - 1.2 9.2 19.6 0.14 12.1 6.7 3.2 2 2 0 2 2 2 0 Transposase zinc-ribbon domain zf-UDP PF14569.6 ORF82132 - 6.4 7.0 18.2 3.4 7.8 2.1 3.1 2 1 1 3 3 3 0 Zinc-binding RING-finger Synaptobrevin PF00957.21 ORF81431 - 0.014 15.1 0.4 0.023 14.5 0.4 1.3 1 0 0 1 1 1 0 Synaptobrevin RRF_GI PF12614.8 ORF81431 - 0.14 12.3 0.4 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Ribosome recycling factor CWC25 PF12542.8 ORF81338 - 0.051 14.5 0.4 0.074 14.0 0.4 1.2 1 0 0 1 1 1 0 Pre-mRNA splicing factor MORN PF02493.20 ORF79672 - 1.3e-05 24.8 14.8 0.048 13.6 0.3 5.1 6 0 0 6 6 6 3 MORN repeat CBP_BcsN PF17038.5 ORF79277 - 0.081 12.3 0.3 0.15 11.4 0.3 1.4 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsN GST_N_3 PF13417.6 ORF78932 - 7.6e-09 35.9 0.0 2.9e-08 34.0 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF78932 - 2.8e-08 34.0 0.0 4.1e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF78932 - 9.6e-08 32.2 0.0 1.8e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF1214 PF06742.11 ORF78557 - 6.2e-27 94.2 0.0 8.1e-27 93.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1214) zf-rbx1 PF12678.7 ORF77842 - 2e-05 24.8 5.2 3.2e-05 24.1 5.2 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF77842 - 5.5e-05 23.1 1.9 9.1e-05 22.4 1.9 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_2 PF13639.6 ORF77842 - 9.6e-05 22.6 3.1 0.00016 21.9 3.1 1.3 1 0 0 1 1 1 1 Ring finger domain RINGv PF12906.7 ORF77842 - 0.0083 16.2 4.7 0.014 15.5 4.7 1.4 1 0 0 1 1 1 1 RING-variant domain Vps39_2 PF10367.9 ORF77842 - 0.0095 16.4 0.0 4.5 7.8 0.0 2.3 2 0 0 2 2 2 2 Vacuolar sorting protein 39 domain 2 NCE101 PF11654.8 ORF77842 - 0.063 13.0 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 Non-classical export protein 1 UPF0542 PF15086.6 ORF77842 - 0.16 11.9 0.3 0.28 11.1 0.3 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 zf-C3HC4 PF00097.25 ORF77842 - 0.18 11.7 4.2 0.3 11.0 4.2 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF77842 - 0.21 11.6 2.6 0.35 10.9 2.6 1.3 1 0 0 1 1 1 0 zinc-RING finger domain FANCL_C PF11793.8 ORF77842 - 0.24 11.6 2.8 0.57 10.4 2.8 1.6 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_UBOX PF13445.6 ORF77842 - 0.45 10.6 2.6 0.57 10.3 1.7 1.6 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF77842 - 5 7.1 5.9 18 5.3 6.0 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Pam16 PF03656.13 ORF77625 - 4.5e-17 62.2 0.0 7.3e-17 61.6 0.0 1.4 1 0 0 1 1 1 1 Pam16 DUF603 PF04645.12 ORF77625 - 0.032 14.0 0.1 1 9.0 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function, DUF603 Ion_trans PF00520.31 ORF77290 - 0.00035 19.9 1.3 0.00068 18.9 0.8 1.6 2 0 0 2 2 2 1 Ion transport protein SHP PF03579.13 ORF77290 - 0.045 13.7 0.3 0.045 13.7 0.3 1.6 2 0 0 2 2 2 0 Small hydrophobic protein NADH_4Fe-4S PF10589.9 ORF77168 - 7.2 6.8 9.9 7.7 6.7 3.9 2.4 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region X PF00739.19 ORF77047 - 1.3 9.1 6.6 0.92 9.6 0.4 2.2 1 1 1 2 2 2 0 Trans-activation protein X EamA PF00892.20 ORF76647 - 0.0019 18.4 9.3 0.0025 18.0 9.3 1.1 1 0 0 1 1 1 1 EamA-like transporter family DUF5090 PF17009.5 ORF76647 - 0.036 14.0 0.3 0.039 13.9 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF5373 PF17343.2 ORF76647 - 0.04 13.7 0.1 0.064 13.1 0.1 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5373) SpoIID PF08486.10 ORF73838 - 0.034 14.7 0.2 0.1 13.2 0.2 1.8 1 1 0 1 1 1 0 Stage II sporulation protein PBP1_TM PF14812.6 ORF73838 - 0.099 13.0 5.3 0.16 12.4 5.3 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal NOA36 PF06524.12 ORF73838 - 3.1 7.0 4.3 3.9 6.7 4.3 1.1 1 0 0 1 1 1 0 NOA36 protein PuR_N PF09182.10 ORF72300 - 0.042 13.8 0.1 0.07 13.1 0.1 1.4 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal zf-C3HC4_3 PF13920.6 ORF71488 - 1.3e-12 47.3 7.7 1.3e-12 47.3 7.7 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF71488 - 5.2e-05 23.0 8.2 0.0001 22.0 8.2 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF71488 - 0.00017 21.5 7.9 0.00017 21.5 7.9 1.8 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF71488 - 0.00018 21.3 8.3 0.00018 21.3 8.3 2.3 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF71488 - 0.00025 21.3 7.7 0.00025 21.3 7.7 2.1 2 1 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF71488 - 0.0011 18.9 2.1 0.0031 17.5 2.1 1.8 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF71488 - 0.0014 18.5 4.6 0.0014 18.5 4.6 2.0 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C2H2 PF00096.26 ORF71488 - 0.002 18.5 2.6 0.002 18.5 2.6 3.2 3 1 0 3 3 3 1 Zinc finger, C2H2 type zf-RING_11 PF17123.5 ORF71488 - 0.0027 17.4 5.6 0.019 14.7 1.9 2.8 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4_4 PF15227.6 ORF71488 - 0.023 14.8 4.8 0.024 14.8 3.1 2.0 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING CxC7 PF18866.1 ORF71488 - 0.024 14.8 1.6 1.9 8.7 0.9 2.5 2 0 0 2 2 2 0 CxC7 like cysteine cluster associated with KDZ transposases zf-met PF12874.7 ORF71488 - 0.86 10.1 0.1 0.86 10.1 0.1 3.8 4 0 0 4 4 4 0 Zinc-finger of C2H2 type Zn_Tnp_IS91 PF14319.6 ORF71488 - 1.7 8.7 9.4 0.49 10.5 3.7 2.1 2 0 0 2 2 2 0 Transposase zinc-binding domain CAP PF00188.26 ORF71146 - 4.4e-05 24.3 0.0 6.6e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DUF5487 PF17589.2 ORF67919 - 0.14 12.4 1.0 3 8.1 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5487) PS-DH PF14765.6 ORF6689 - 3.9e-10 39.4 1.5 4.4e-10 39.3 1.5 1.1 1 0 0 1 1 1 1 Polyketide synthase dehydratase DUF4696 PF15767.5 ORF6689 - 0.0062 15.2 0.2 0.0082 14.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4696) FCD PF07729.12 ORF6689 - 0.06 13.8 1.1 0.42 11.1 0.2 2.3 2 0 0 2 2 2 0 FCD domain Aminotran_4 PF01063.19 ORF63187 - 4.8e-09 36.4 0.0 5.7e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV Pkinase PF00069.25 ORF62909 - 1.9e-09 37.3 0.0 2.5e-09 36.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62909 - 3.4e-05 23.2 0.0 4.5e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Skp1 PF01466.19 ORF60792 - 1.2e-27 95.7 1.2 5.5e-27 93.6 0.9 2.1 2 0 0 2 2 2 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF60792 - 8.4e-24 83.5 0.3 1.9e-23 82.4 0.3 1.6 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain IF4E PF01652.18 ORF6031 - 7.3e-31 107.1 0.0 9.1e-31 106.8 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E LAL_C2 PF18603.1 ORF56966 - 0.058 13.6 0.0 0.52 10.5 0.0 2.0 2 0 0 2 2 2 0 L-amino acid ligase C-terminal domain 2 DUF3995 PF13160.6 ORF5645 - 0.06 13.7 0.5 0.57 10.5 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3995) TMEM100 PF16311.5 ORF5645 - 0.08 12.5 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 100 Promethin PF16015.5 ORF56364 - 0.076 12.9 5.2 0.14 12.1 5.2 1.5 1 1 0 1 1 1 0 Promethin Prefoldin PF02996.17 ORF56307 - 5.4e-29 100.5 0.9 8.8e-29 99.9 0.9 1.3 1 0 0 1 1 1 1 Prefoldin subunit EMP24_GP25L PF01105.24 ORF56307 - 0.13 12.2 6.3 0.099 12.6 1.7 2.1 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD BORCS7 PF16088.5 ORF56307 - 0.15 12.3 5.9 0.12 12.6 0.9 2.2 2 0 0 2 2 2 0 BLOC-1-related complex sub-unit 7 TMF_TATA_bd PF12325.8 ORF56307 - 0.69 10.1 12.7 0.91 9.8 3.3 2.1 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding ING PF12998.7 ORF5455 - 0.029 14.9 3.1 0.073 13.7 3.1 1.9 1 1 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding DnaJ PF00226.31 ORF54446 - 2e-09 37.4 0.0 3.2e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain 60KD_IMP PF02096.20 ORF52332 - 4e-08 33.3 0.1 5.9e-08 32.8 0.1 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein NPC1_N PF16414.5 ORF52109 - 6.1e-17 62.0 7.5 6.9e-17 61.8 7.5 1.1 1 0 0 1 1 1 1 Niemann-Pick C1 N terminus DUF4400 PF14348.6 ORF5133 - 0.02 14.4 0.0 0.033 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) AstB PF04996.12 ORF51288 - 1e-68 232.1 0.0 1.1e-68 231.9 0.0 1.0 1 0 0 1 1 1 1 Succinylarginine dihydrolase PKcGMP_CC PF16808.5 ORF50569 - 0.011 15.5 5.4 0.97 9.3 0.5 2.5 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase HIP1_clath_bdg PF16515.5 ORF50569 - 0.014 16.0 0.2 0.027 15.1 0.2 1.5 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CEP63 PF17045.5 ORF50569 - 0.048 13.6 0.6 0.08 12.8 0.5 1.4 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa BRE1 PF08647.11 ORF50569 - 0.059 13.5 0.2 0.1 12.7 0.2 1.4 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase DUF1192 PF06698.11 ORF50569 - 0.084 12.9 6.8 0.54 10.3 1.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) Prp19 PF08606.11 ORF50569 - 0.094 12.7 2.1 0.18 11.8 1.6 1.7 1 1 0 1 1 1 0 Prp19/Pso4-like MYO10_CC PF16735.5 ORF50569 - 0.23 11.6 4.6 0.52 10.5 0.6 2.5 1 1 1 2 2 2 0 Unconventional myosin-X coiled coil domain FANC_SAP PF18081.1 ORF50569 - 1 9.6 5.3 73 3.6 0.3 2.6 1 1 1 2 2 2 0 Fanconi anemia-associated nuclease SAP domain betaPIX_CC PF16523.5 ORF50430 - 0.035 13.9 1.7 0.073 12.9 1.7 1.5 1 0 0 1 1 1 0 betaPIX coiled coil TAN PF11640.8 ORF50430 - 0.071 13.2 0.8 0.094 12.8 0.8 1.2 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair DUF4274 PF14096.6 ORF49273 - 0.082 12.9 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4274) Vault_4 PF17796.1 ORF49273 - 0.13 12.4 0.2 2.5 8.2 0.0 2.4 2 0 0 2 2 2 0 Major Vault Protein repeat domain DHHC PF01529.20 ORF46903 - 6.9e-06 26.2 18.0 1.4e-05 25.2 18.0 1.5 1 1 0 1 1 1 1 DHHC palmitoyltransferase ABM PF03992.16 ORF46007 - 0.00073 19.6 0.1 0.001 19.2 0.1 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Protein_K PF12283.8 ORF46007 - 0.086 13.1 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 Bacteriophage protein K MFS_1 PF07690.16 ORF458 - 3e-17 62.6 16.4 3.4e-17 62.4 16.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF458 - 6.6e-06 25.2 10.9 8.3e-06 24.9 10.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 ORF458 - 3e-05 23.0 12.3 3.3e-05 22.9 12.3 1.0 1 0 0 1 1 1 1 MFS_1 like family DUF2070 PF09843.9 ORF458 - 0.23 9.7 7.0 0.25 9.6 7.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Vut_1 PF02592.15 ORF458 - 1.4 9.3 10.0 0.19 12.1 4.8 1.9 1 1 1 2 2 2 0 Putative vitamin uptake transporter zf-B_box PF00643.24 ORF45125 - 0.00082 19.5 7.8 0.00082 19.5 7.8 2.4 3 0 0 3 3 3 1 B-box zinc finger PHD PF00628.29 ORF45125 - 0.0018 18.1 3.7 0.0018 18.1 3.7 1.9 2 0 0 2 2 2 1 PHD-finger PHD_2 PF13831.6 ORF45125 - 0.0035 16.9 0.9 0.0097 15.4 0.9 1.8 1 0 0 1 1 1 1 PHD-finger Alpha-2-MRAP_C PF06401.11 ORF45125 - 0.029 14.3 0.6 0.039 13.9 0.6 1.1 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain SNO PF01174.19 ORF45125 - 0.083 12.7 0.6 1 9.2 0.0 2.2 1 1 0 2 2 2 0 SNO glutamine amidotransferase family Prok-RING_1 PF14446.6 ORF45125 - 0.2 11.6 4.9 0.39 10.7 4.9 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Abhydrolase_4 PF08386.10 ORF44343 - 2.6e-11 43.5 0.1 8.1e-09 35.5 0.0 2.1 1 1 1 2 2 2 2 TAP-like protein DUF4830 PF16112.5 ORF44146 - 0.036 14.5 0.1 0.064 13.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) DUF5487 PF17589.2 ORF43740 - 0.14 12.4 1.0 3 8.1 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5487) AvrB_AvrC PF05394.11 ORF38693 - 0.013 14.7 0.5 0.017 14.3 0.5 1.0 1 0 0 1 1 1 0 Avirulence protein DUF5487 PF17589.2 ORF38584 - 0.14 12.4 1.0 3 8.1 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5487) EamA PF00892.20 ORF3821 - 0.014 15.6 10.2 0.022 14.9 10.2 1.5 1 1 0 1 1 1 0 EamA-like transporter family Hpt PF01627.23 ORF37780 - 0.13 12.6 2.3 0.19 12.0 2.3 1.3 1 0 0 1 1 1 0 Hpt domain ubiquitin PF00240.23 ORF35941 - 1.5e-07 31.0 0.0 3.8e-07 29.7 0.0 1.7 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF35941 - 1.1e-05 25.2 0.0 3e-05 23.8 0.0 1.8 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407_C PF13373.6 ORF35941 - 0.0041 17.3 0.1 0.0095 16.1 0.0 1.6 2 0 0 2 2 2 1 DUF2407 C-terminal domain DUF3755 PF12579.8 ORF35941 - 0.021 14.5 0.4 0.047 13.4 0.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3755) Ubiquitin_5 PF18037.1 ORF35941 - 0.024 15.0 0.7 0.044 14.1 0.2 1.7 1 1 0 1 1 1 0 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF35941 - 0.029 14.5 0.1 0.045 13.9 0.1 1.4 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Plexin_cytopl PF08337.12 ORF35941 - 0.034 12.8 0.2 0.042 12.5 0.2 1.3 1 0 0 1 1 1 0 Plexin cytoplasmic RasGAP domain Wx5_PLAF3D7 PF09688.10 ORF35941 - 0.093 12.7 1.6 0.14 12.2 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (Wx5_PLAF3D7) CENP-F_leu_zip PF10473.9 ORF35521 - 0.00022 21.3 18.4 0.075 13.1 11.7 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 ORF35521 - 0.00092 18.6 18.8 0.012 14.9 18.7 2.0 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding DivIC PF04977.15 ORF35521 - 0.0012 18.6 14.2 0.16 11.7 0.7 3.1 2 1 1 3 3 3 3 Septum formation initiator ZapB PF06005.12 ORF35521 - 0.002 18.5 16.8 0.066 13.7 2.7 2.3 2 0 0 2 2 2 2 Cell division protein ZapB Sas6_CC PF18594.1 ORF35521 - 0.0032 17.2 3.3 5.8 6.8 0.1 3.7 2 1 1 3 3 3 0 Sas6/XLF/XRCC4 coiled-coil domain DUF2968 PF11180.8 ORF35521 - 0.0035 17.0 15.5 0.052 13.2 9.3 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2968) DUF1664 PF07889.12 ORF35521 - 0.0043 17.1 9.9 0.24 11.4 4.8 2.1 1 1 0 2 2 2 2 Protein of unknown function (DUF1664) CCDC144C PF14915.6 ORF35521 - 0.0079 15.4 14.5 0.011 14.9 14.5 1.1 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region Spc7 PF08317.11 ORF35521 - 0.0096 14.8 15.5 0.016 14.1 15.5 1.3 1 0 0 1 1 1 1 Spc7 kinetochore protein SlyX PF04102.12 ORF35521 - 0.012 16.2 14.3 0.42 11.3 6.2 2.4 1 1 1 2 2 2 0 SlyX DUF4140 PF13600.6 ORF35521 - 0.013 15.9 7.1 2.9 8.4 0.0 2.5 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) JAKMIP_CC3 PF16034.5 ORF35521 - 0.014 15.3 16.1 0.031 14.2 16.2 1.5 1 1 0 1 1 1 0 JAKMIP CC3 domain VRP1 PF03538.14 ORF35521 - 0.017 14.6 1.1 0.022 14.2 1.1 1.3 1 1 0 1 1 1 0 Salmonella virulence plasmid 28.1kDa A protein AAA_13 PF13166.6 ORF35521 - 0.017 13.8 9.9 0.021 13.5 9.9 1.1 1 0 0 1 1 1 0 AAA domain DUF4618 PF15397.6 ORF35521 - 0.021 14.2 16.3 0.16 11.3 2.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) Erf4 PF10256.9 ORF35521 - 0.022 14.8 0.7 0.044 13.9 0.2 1.7 1 1 0 2 2 1 0 Golgin subfamily A member 7/ERF4 family FAM76 PF16046.5 ORF35521 - 0.03 13.7 14.6 0.035 13.5 10.6 2.0 1 1 1 2 2 2 0 FAM76 protein Rab5-bind PF09311.11 ORF35521 - 0.035 13.5 16.2 0.84 9.0 10.1 2.1 1 1 1 2 2 2 0 Rabaptin-like protein DUF4795 PF16043.5 ORF35521 - 0.045 13.4 15.1 0.26 10.9 4.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Tektin PF03148.14 ORF35521 - 0.051 12.3 15.6 0.25 10.0 2.2 1.9 1 1 1 2 2 2 0 Tektin family FapA PF03961.13 ORF35521 - 0.054 12.1 11.3 0.13 10.8 11.3 1.6 1 1 0 1 1 1 0 Flagellar Assembly Protein A Csm1_N PF18504.1 ORF35521 - 0.061 13.7 2.3 0.061 13.7 2.3 3.0 1 1 3 4 4 4 0 Csm1 N-terminal domain DUF4164 PF13747.6 ORF35521 - 0.063 13.6 10.7 0.61 10.4 5.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) DUF5320 PF17253.2 ORF35521 - 0.069 14.2 12.9 2.5 9.2 2.8 3.1 1 1 1 2 2 2 0 Family of unknown function (DUF5320) bZIP_1 PF00170.21 ORF35521 - 0.073 13.2 16.1 0.65 10.1 2.8 2.6 2 1 0 2 2 2 0 bZIP transcription factor TPR_MLP1_2 PF07926.12 ORF35521 - 0.075 13.1 18.1 1.1 9.4 8.7 2.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 ORF35521 - 0.11 11.8 11.2 0.31 10.4 11.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF35521 - 0.12 12.5 20.0 1.3 9.1 3.2 2.5 1 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding HlyD_2 PF12700.7 ORF35521 - 0.15 10.8 9.0 0.18 10.5 9.0 1.1 1 0 0 1 1 1 0 HlyD family secretion protein SAM_KSR1 PF13543.6 ORF35521 - 0.15 12.2 7.2 0.061 13.5 3.7 2.0 1 1 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 APG6_N PF17675.1 ORF35521 - 0.15 12.6 19.6 1.4 9.5 14.0 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF2408 PF10303.9 ORF35521 - 0.16 12.5 7.7 0.21 12.1 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Cep57_MT_bd PF06657.13 ORF35521 - 0.17 12.4 15.1 0.35 11.4 4.2 2.3 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Helo_like_N PF17111.5 ORF35521 - 0.17 11.2 10.6 1.2 8.4 1.1 2.2 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins Atg14 PF10186.9 ORF35521 - 0.2 10.7 13.1 1.1 8.2 13.1 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5082 PF16888.5 ORF35521 - 0.23 11.7 13.0 1.1 9.6 3.0 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) HALZ PF02183.18 ORF35521 - 0.26 11.5 0.3 0.26 11.5 0.3 3.8 3 1 1 4 4 4 0 Homeobox associated leucine zipper ZapD PF07072.11 ORF35521 - 0.3 10.8 8.4 0.42 10.3 7.8 1.5 1 1 1 2 2 2 0 Cell division protein LCD1 PF09798.9 ORF35521 - 0.34 9.4 11.3 0.44 9.0 11.3 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein PRKG1_interact PF15898.5 ORF35521 - 0.54 11.2 15.5 18 6.3 14.9 2.3 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain UPF0242 PF06785.11 ORF35521 - 0.58 10.2 17.5 1.9 8.6 17.5 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus UCH PF00443.29 ORF35521 - 0.59 9.6 4.0 0.72 9.3 4.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Ax_dynein_light PF10211.9 ORF35521 - 0.59 10.0 15.6 2 8.3 6.6 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain HIP1_clath_bdg PF16515.5 ORF35521 - 0.69 10.6 19.6 1.1 9.9 7.8 2.6 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Fez1 PF06818.15 ORF35521 - 0.69 10.3 15.1 1.3 9.4 15.1 1.4 1 1 0 1 1 1 0 Fez1 NPV_P10 PF05531.12 ORF35521 - 0.9 10.1 9.5 1.2 9.6 2.0 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Tup_N PF08581.10 ORF35521 - 0.91 9.9 14.5 0.45 10.8 10.2 2.1 1 1 1 2 2 2 0 Tup N-terminal Syntaxin_2 PF14523.6 ORF35521 - 0.95 9.9 15.1 20 5.7 15.1 2.2 1 1 0 1 1 1 0 Syntaxin-like protein bZIP_2 PF07716.15 ORF35521 - 1 9.5 19.3 0.18 11.9 1.3 3.6 2 2 1 3 3 3 0 Basic region leucine zipper Cluap1 PF10234.9 ORF35521 - 1.1 8.5 14.4 3.4 7.0 3.6 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 Tropomyosin_1 PF12718.7 ORF35521 - 1.2 9.3 17.4 2.8 8.1 4.4 2.1 1 1 1 2 2 2 0 Tropomyosin like Ly49 PF08391.10 ORF35521 - 1.5 9.2 8.1 1.7 9.0 7.2 1.6 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region DUF724 PF05266.14 ORF35521 - 1.5 8.6 13.4 1.9 8.3 3.3 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF724) DUF3450 PF11932.8 ORF35521 - 1.6 8.0 16.2 4 6.7 6.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) LapA_dom PF06305.11 ORF35521 - 2 8.3 8.0 38 4.2 0.5 3.4 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain Spc24 PF08286.11 ORF35521 - 2.2 8.6 14.7 4.2 7.7 3.4 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 zf-C4H2 PF10146.9 ORF35521 - 2.4 8.4 12.5 4.6 7.5 12.5 1.4 1 1 0 1 1 1 0 Zinc finger-containing protein TMPIT PF07851.13 ORF35521 - 2.7 7.2 13.3 3.2 6.9 9.9 1.9 1 1 1 2 2 2 0 TMPIT-like protein Fib_alpha PF08702.10 ORF35521 - 2.9 8.1 12.1 4.1 7.6 12.1 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family GIT_CC PF16559.5 ORF35521 - 3.2 7.7 14.9 2.3 8.2 1.5 2.8 1 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF1192 PF06698.11 ORF35521 - 3.4 7.8 6.5 7.5 6.7 0.1 3.4 2 1 2 4 4 3 0 Protein of unknown function (DUF1192) Surfac_D-trimer PF09006.11 ORF35521 - 3.5 7.6 8.1 40 4.2 0.4 3.3 2 1 1 3 3 3 0 Lung surfactant protein D coiled-coil trimerisation Jnk-SapK_ap_N PF09744.9 ORF35521 - 4 7.7 19.2 13 6.0 13.5 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 KfrA_N PF11740.8 ORF35521 - 4.1 8.1 10.6 14 6.4 10.0 2.0 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term Tho2 PF11262.8 ORF35521 - 4.4 6.4 13.7 7 5.7 2.7 2.0 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 JIP_LZII PF16471.5 ORF35521 - 5 7.4 17.1 0.68 10.1 1.6 3.1 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II Prefoldin_2 PF01920.20 ORF35521 - 6.6 6.8 19.0 13 5.8 5.4 3.0 1 1 2 3 3 3 0 Prefoldin subunit Nnf1 PF03980.14 ORF35521 - 6.8 7.1 15.9 44 4.5 1.0 2.8 1 1 2 3 3 3 0 Nnf1 Prominin PF05478.11 ORF35521 - 7 4.5 11.5 14 3.5 11.5 1.5 1 1 0 1 1 1 0 Prominin bZIP_Maf PF03131.17 ORF35521 - 7.2 7.2 13.1 27 5.4 7.9 2.3 1 1 1 2 2 2 0 bZIP Maf transcription factor YabA PF06156.13 ORF35521 - 8.6 7.1 15.0 18 6.0 6.0 2.3 1 1 1 2 2 2 0 Initiation control protein YabA ABC_tran_CTD PF16326.5 ORF35521 - 9.4 6.6 16.3 10 6.4 4.1 3.2 1 1 2 3 3 3 0 ABC transporter C-terminal domain Baculo_PEP_C PF04513.12 ORF355 - 0.0026 17.8 7.7 0.16 12.0 3.3 2.4 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus DUF2710 PF10921.8 ORF355 - 0.046 14.1 0.1 0.072 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2710) Tfb2_C PF18307.1 ORF355 - 0.11 12.9 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 Transcription factor Tfb2 (p52) C-terminal domain DUF3958 PF13125.6 ORF355 - 0.23 11.7 2.3 0.48 10.7 0.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3958) Sulfotransfer_1 PF00685.27 ORF35415 - 0.0074 15.8 0.1 0.12 11.9 0.0 2.3 2 1 0 2 2 2 2 Sulfotransferase domain IU_nuc_hydro PF01156.19 ORF35262 - 4e-20 72.6 0.0 4.5e-20 72.4 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase Wzy_C PF04932.15 ORF34986 - 0.13 11.9 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase BET PF17035.5 ORF34761 - 0.00042 20.4 0.2 0.001 19.2 0.0 1.8 2 0 0 2 2 2 1 Bromodomain extra-terminal - transcription regulation EamA PF00892.20 ORF31343 - 0.014 15.6 10.2 0.022 14.9 10.2 1.5 1 1 0 1 1 1 0 EamA-like transporter family Sugar_tr PF00083.24 ORF30754 - 4.7e-05 22.4 0.0 4.9e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF28897 - 5.7e-19 68.3 15.7 6.4e-19 68.1 15.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF28897 - 2.2e-06 26.8 10.5 2.8e-06 26.5 10.5 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 ORF28897 - 1.2e-05 24.4 11.3 1.3e-05 24.2 11.3 1.0 1 0 0 1 1 1 1 MFS_1 like family O-antigen_lig PF13425.6 ORF28897 - 0.041 12.7 7.0 0.059 12.2 7.0 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF2070 PF09843.9 ORF28897 - 0.4 8.9 7.1 0.43 8.8 7.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) EF-hand_1 PF00036.32 ORF26703 - 1.6e-08 33.5 2.4 0.22 11.1 0.0 4.3 5 0 0 5 5 5 3 EF hand EF-hand_6 PF13405.6 ORF26703 - 7.9e-06 25.4 0.1 11 6.2 0.0 4.1 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF26703 - 5e-05 23.7 2.6 0.11 13.0 0.5 3.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF26703 - 0.0021 17.9 1.0 0.024 14.6 0.1 2.3 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_8 PF13833.6 ORF26703 - 0.014 15.2 1.5 2.4 8.1 0.0 3.4 4 0 0 4 4 4 0 EF-hand domain pair RFX_DNA_binding PF02257.15 ORF26703 - 0.091 13.4 0.0 0.43 11.2 0.0 2.0 2 0 0 2 2 2 0 RFX DNA-binding domain Rieske PF00355.26 ORF26578 - 3.8e-10 39.6 0.0 5e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF26578 - 0.05 13.5 0.0 0.077 12.9 0.0 1.3 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain Mannosyl_trans3 PF11051.8 ORF26578 - 0.051 12.9 0.1 0.068 12.5 0.1 1.2 1 0 0 1 1 1 0 Mannosyltransferase putative AUX_IAA PF02309.16 ORF26578 - 0.084 12.7 0.2 0.13 12.1 0.2 1.2 1 0 0 1 1 1 0 AUX/IAA family EF-hand_7 PF13499.6 ORF23088 - 2.4e-09 37.5 0.6 2.4e-09 37.5 0.6 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF23088 - 2.1e-08 33.1 10.2 0.00016 21.0 2.7 3.4 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF23088 - 2.1e-08 33.2 5.4 0.0015 17.9 0.0 3.4 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF23088 - 4.2e-06 26.3 4.2 0.046 13.7 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF23088 - 2.4e-05 24.1 5.3 0.013 15.3 1.4 2.8 2 0 0 2 2 2 2 EF-hand domain pair YceG_bac PF14266.6 ORF23088 - 0.01 14.8 2.0 0.013 14.4 2.0 1.0 1 0 0 1 1 1 0 Putative component of 'biosynthetic module' Wzy_C PF04932.15 ORF22321 - 0.13 11.9 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase ERGIC_N PF13850.6 ORF20005 - 0.0019 18.5 0.4 0.0032 17.8 0.4 1.4 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF755 PF05501.11 ORF195 - 8.9e-05 22.8 29.0 8.9e-05 22.8 29.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF755) Tir_receptor_N PF07490.11 ORF195 - 0.042 13.7 2.1 0.047 13.5 2.1 1.1 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) N-terminus OATP PF03137.20 ORF195 - 0.2 9.9 4.3 0.29 9.4 4.3 1.2 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family FAM176 PF14851.6 ORF195 - 0.22 11.2 5.9 0.16 11.6 3.5 1.8 2 0 0 2 2 2 0 FAM176 family SpoIIP PF07454.11 ORF195 - 0.4 10.1 10.7 0.48 9.8 8.8 1.8 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) Zip PF02535.22 ORF195 - 0.47 9.6 4.5 0.45 9.7 4.5 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter DDHD PF02862.17 ORF195 - 0.63 10.2 8.6 0.75 9.9 8.6 1.1 1 0 0 1 1 1 0 DDHD domain Presenilin PF01080.17 ORF195 - 0.64 8.7 8.0 0.6 8.8 8.0 1.2 1 0 0 1 1 1 0 Presenilin G0-G1_switch_2 PF15103.6 ORF195 - 0.81 10.1 7.4 0.59 10.6 3.4 2.0 2 0 0 2 2 2 0 G0/G1 switch protein 2 SAPS PF04499.15 ORF195 - 0.99 8.1 8.4 1 8.0 8.4 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein V_ATPase_I PF01496.19 ORF195 - 1.7 6.5 4.8 1.6 6.5 4.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Menin PF05053.13 ORF195 - 1.7 6.9 9.0 1.8 6.9 9.0 1.1 1 0 0 1 1 1 0 Menin CDC45 PF02724.14 ORF195 - 2.5 6.3 10.6 3.2 5.9 10.6 1.2 1 0 0 1 1 1 0 CDC45-like protein GREB1 PF15782.5 ORF195 - 2.6 5.0 14.3 2.7 5.0 14.3 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Striatin PF08232.12 ORF195 - 6.8 7.3 16.1 10 6.7 16.1 1.3 1 1 0 1 1 1 0 Striatin family ALMT PF11744.8 ORF195 - 8.2 5.1 7.8 8.3 5.1 7.8 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter M16C_assoc PF08367.11 ORF19325 - 0.11 11.6 0.1 0.15 11.1 0.1 1.2 1 0 0 1 1 1 0 Peptidase M16C associated MFS_1 PF07690.16 ORF19160 - 3e-17 62.6 16.4 3.4e-17 62.4 16.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF19160 - 6.6e-06 25.2 10.9 8.3e-06 24.9 10.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 ORF19160 - 3e-05 23.0 12.3 3.3e-05 22.9 12.3 1.0 1 0 0 1 1 1 1 MFS_1 like family DUF2070 PF09843.9 ORF19160 - 0.23 9.7 7.0 0.25 9.6 7.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Vut_1 PF02592.15 ORF19160 - 1.4 9.3 10.0 0.19 12.1 4.8 1.9 1 1 1 2 2 2 0 Putative vitamin uptake transporter CENP-F_leu_zip PF10473.9 ORF19134 - 0.0002 21.4 18.7 0.036 14.1 11.6 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 ORF19134 - 0.00094 18.6 19.1 0.011 15.1 19.0 2.0 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding DUF1664 PF07889.12 ORF19134 - 0.0017 18.4 9.7 0.093 12.8 4.7 2.1 1 1 0 2 2 2 1 Protein of unknown function (DUF1664) DivIC PF04977.15 ORF19134 - 0.0017 18.1 13.8 0.16 11.7 0.7 3.1 2 1 1 3 3 3 2 Septum formation initiator ZapB PF06005.12 ORF19134 - 0.0028 18.0 17.5 0.066 13.7 2.7 2.3 2 0 0 2 2 2 2 Cell division protein ZapB CCDC144C PF14915.6 ORF19134 - 0.0033 16.6 14.9 0.004 16.3 14.9 1.1 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region DUF2968 PF11180.8 ORF19134 - 0.0036 16.9 15.8 0.054 13.1 9.6 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2968) DUF4140 PF13600.6 ORF19134 - 0.0086 16.5 7.0 2.3 8.7 4.0 2.5 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) AAA_13 PF13166.6 ORF19134 - 0.0092 14.7 9.9 0.011 14.4 9.9 1.0 1 0 0 1 1 1 1 AAA domain JAKMIP_CC3 PF16034.5 ORF19134 - 0.013 15.5 16.1 0.038 13.9 16.5 1.6 1 1 0 1 1 1 0 JAKMIP CC3 domain VRP1 PF03538.14 ORF19134 - 0.014 14.8 0.8 0.018 14.4 0.8 1.3 1 1 0 1 1 1 0 Salmonella virulence plasmid 28.1kDa A protein Sas6_CC PF18594.1 ORF19134 - 0.015 15.1 5.8 5.8 6.8 0.1 3.9 3 1 1 4 4 3 0 Sas6/XLF/XRCC4 coiled-coil domain Rab5-bind PF09311.11 ORF19134 - 0.019 14.4 16.6 0.46 9.8 10.5 2.1 1 1 1 2 2 2 0 Rabaptin-like protein Erf4 PF10256.9 ORF19134 - 0.023 14.8 0.7 0.046 13.8 0.2 1.7 1 1 1 2 2 2 0 Golgin subfamily A member 7/ERF4 family DUF4618 PF15397.6 ORF19134 - 0.024 14.0 16.4 0.12 11.7 2.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) FAM76 PF16046.5 ORF19134 - 0.026 13.9 14.6 0.032 13.6 10.7 2.0 1 1 1 2 2 2 0 FAM76 protein SlyX PF04102.12 ORF19134 - 0.029 15.0 15.2 0.82 10.3 6.8 2.5 1 1 1 2 2 2 0 SlyX Tektin PF03148.14 ORF19134 - 0.031 13.0 15.4 0.24 10.1 1.9 2.0 1 1 1 2 2 2 0 Tektin family Spc7 PF08317.11 ORF19134 - 0.035 13.0 17.6 0.077 11.9 17.6 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein FapA PF03961.13 ORF19134 - 0.043 12.4 11.0 0.11 11.0 11.0 1.6 1 1 0 1 1 1 0 Flagellar Assembly Protein A DUF5102 PF17104.5 ORF19134 - 0.045 13.8 1.4 0.045 13.8 1.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5102) DUF4795 PF16043.5 ORF19134 - 0.046 13.3 15.0 0.23 11.1 3.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF4164 PF13747.6 ORF19134 - 0.06 13.6 10.8 0.54 10.6 5.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) TPR_MLP1_2 PF07926.12 ORF19134 - 0.061 13.4 17.9 1.5 8.9 17.7 2.2 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Csm1_N PF18504.1 ORF19134 - 0.066 13.6 2.7 0.066 13.6 2.7 3.0 1 1 3 4 4 4 0 Csm1 N-terminal domain DUF5320 PF17253.2 ORF19134 - 0.069 14.2 13.4 1.4 10.0 0.7 3.1 1 1 2 3 3 3 0 Family of unknown function (DUF5320) bZIP_1 PF00170.21 ORF19134 - 0.085 13.0 16.2 0.82 9.8 3.1 2.5 2 1 0 2 2 2 0 bZIP transcription factor ADIP PF11559.8 ORF19134 - 0.11 12.6 20.0 1.1 9.4 2.9 2.6 1 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF2408 PF10303.9 ORF19134 - 0.12 13.0 7.3 0.16 12.6 7.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) APG6_N PF17675.1 ORF19134 - 0.13 12.8 19.6 1.3 9.6 14.2 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region HlyD_2 PF12700.7 ORF19134 - 0.13 11.0 8.2 0.17 10.6 8.2 1.1 1 0 0 1 1 1 0 HlyD family secretion protein DUF4407 PF14362.6 ORF19134 - 0.14 11.5 11.2 0.59 9.4 11.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TMF_TATA_bd PF12325.8 ORF19134 - 0.19 11.9 15.8 2.6 8.3 6.7 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Helo_like_N PF17111.5 ORF19134 - 0.2 11.0 10.9 1.3 8.3 1.0 2.3 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins SAM_KSR1 PF13543.6 ORF19134 - 0.2 11.8 7.8 0.068 13.3 3.8 2.1 1 1 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 NPV_P10 PF05531.12 ORF19134 - 0.22 12.0 9.3 1.2 9.6 2.0 2.5 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Atg14 PF10186.9 ORF19134 - 0.25 10.4 13.4 0.21 10.6 9.2 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 HALZ PF02183.18 ORF19134 - 0.26 11.5 0.3 0.26 11.5 0.3 3.9 3 1 1 4 4 4 0 Homeobox associated leucine zipper DUF5082 PF16888.5 ORF19134 - 0.29 11.4 12.9 1.2 9.4 2.9 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) DUF724 PF05266.14 ORF19134 - 0.31 10.8 12.8 0.47 10.2 3.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) LCD1 PF09798.9 ORF19134 - 0.32 9.5 11.1 0.39 9.2 11.1 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein PRKG1_interact PF15898.5 ORF19134 - 0.34 11.8 15.4 0.55 11.2 3.4 2.5 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain BRE1 PF08647.11 ORF19134 - 0.38 10.9 17.4 0.67 10.1 4.7 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase ZapD PF07072.11 ORF19134 - 0.38 10.5 8.9 0.57 9.9 8.4 1.5 1 1 1 2 2 2 0 Cell division protein Cep57_MT_bd PF06657.13 ORF19134 - 0.49 10.9 14.8 0.29 11.6 4.0 2.5 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 UCH PF00443.29 ORF19134 - 0.55 9.7 3.9 0.66 9.4 3.9 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Tropomyosin_1 PF12718.7 ORF19134 - 0.56 10.4 17.1 1.8 8.7 4.4 2.1 1 1 1 2 2 2 0 Tropomyosin like Fez1 PF06818.15 ORF19134 - 0.56 10.6 15.2 1.2 9.5 15.2 1.5 1 1 0 1 1 1 0 Fez1 Pox_A_type_inc PF04508.12 ORF19134 - 0.63 10.0 0.1 0.63 10.0 0.1 2.5 3 0 0 3 3 1 0 Viral A-type inclusion protein repeat zf-C4H2 PF10146.9 ORF19134 - 0.66 10.2 10.3 0.99 9.7 10.3 1.2 1 0 0 1 1 1 0 Zinc finger-containing protein UPF0242 PF06785.11 ORF19134 - 0.66 10.0 17.6 2.8 8.0 17.7 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HIP1_clath_bdg PF16515.5 ORF19134 - 0.69 10.6 20.2 1 10.0 8.3 2.6 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Ax_dynein_light PF10211.9 ORF19134 - 0.74 9.7 15.6 1.4 8.8 5.8 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain Tup_N PF08581.10 ORF19134 - 0.89 9.9 14.5 0.47 10.8 10.2 2.2 1 1 1 2 2 2 0 Tup N-terminal DUF3450 PF11932.8 ORF19134 - 1.1 8.6 16.1 3.4 6.9 6.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) bZIP_2 PF07716.15 ORF19134 - 1.1 9.3 19.5 0.18 11.9 1.3 3.6 2 2 1 3 3 3 0 Basic region leucine zipper Cluap1 PF10234.9 ORF19134 - 1.2 8.4 15.0 3.7 6.9 3.7 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 Syntaxin_2 PF14523.6 ORF19134 - 1.4 9.4 14.9 22 5.5 14.9 2.1 1 1 0 1 1 1 0 Syntaxin-like protein Ly49 PF08391.10 ORF19134 - 1.4 9.3 8.0 2.1 8.7 7.6 1.6 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region JIP_LZII PF16471.5 ORF19134 - 1.7 8.9 16.6 0.24 11.6 1.3 3.1 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II TPD52 PF04201.15 ORF19134 - 2.2 7.8 16.2 0.4 10.3 1.7 3.0 1 1 2 3 3 3 0 Tumour protein D52 family DUF1192 PF06698.11 ORF19134 - 2.3 8.3 5.2 7.5 6.7 0.1 3.3 2 1 2 4 4 3 0 Protein of unknown function (DUF1192) GIT_CC PF16559.5 ORF19134 - 2.5 8.0 14.6 2.6 8.0 2.3 2.9 1 1 2 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor LapA_dom PF06305.11 ORF19134 - 2.5 8.0 8.4 40 4.1 0.6 3.4 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain TMPIT PF07851.13 ORF19134 - 2.6 7.2 13.5 0.91 8.7 5.4 1.9 1 1 1 2 2 2 0 TMPIT-like protein Jnk-SapK_ap_N PF09744.9 ORF19134 - 3 8.0 19.1 14 5.9 15.9 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Tho2 PF11262.8 ORF19134 - 3.5 6.8 13.5 4.7 6.3 2.2 2.0 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 Spc24 PF08286.11 ORF19134 - 3.6 7.9 15.1 6 7.2 3.6 2.6 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Exonuc_VII_L PF02601.15 ORF19134 - 3.6 7.1 10.0 5.6 6.4 10.0 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Surfac_D-trimer PF09006.11 ORF19134 - 3.7 7.5 8.2 40 4.2 0.4 3.4 2 1 1 3 3 3 0 Lung surfactant protein D coiled-coil trimerisation KfrA_N PF11740.8 ORF19134 - 3.7 8.3 10.8 13 6.5 10.3 2.0 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term ABC_tran_CTD PF16326.5 ORF19134 - 4.2 7.7 15.9 18 5.7 2.3 3.1 1 1 2 3 3 3 0 ABC transporter C-terminal domain Prefoldin_2 PF01920.20 ORF19134 - 4.7 7.2 19.0 3.1 7.8 3.3 3.0 1 1 2 3 3 3 0 Prefoldin subunit Fib_alpha PF08702.10 ORF19134 - 5.8 7.1 13.1 8.2 6.6 13.1 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family bZIP_Maf PF03131.17 ORF19134 - 6.5 7.3 13.1 25 5.5 7.7 2.4 1 1 1 2 2 2 0 bZIP Maf transcription factor EMP24_GP25L PF01105.24 ORF19134 - 6.9 6.6 11.4 1.3 8.9 1.3 2.3 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD Nnf1 PF03980.14 ORF19134 - 7.8 6.9 15.9 41 4.6 13.3 2.7 1 1 2 3 3 3 0 Nnf1 Swi5 PF07061.11 ORF19134 - 7.9 6.6 11.6 3.2e+03 -1.7 11.6 2.9 1 1 0 1 1 0 0 Swi5 Prominin PF05478.11 ORF19134 - 8.7 4.1 11.4 18 3.1 11.4 1.5 1 1 0 1 1 1 0 Prominin TMF_DNA_bd PF12329.8 ORF19134 - 9.3 6.3 15.9 5.8 7.0 1.9 2.6 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding YabA PF06156.13 ORF19134 - 9.3 7.0 15.2 37 5.0 4.6 2.3 1 1 1 2 2 2 0 Initiation control protein YabA EF-hand_1 PF00036.32 ORF19018 - 1.6e-14 52.3 0.8 0.00069 19.0 0.0 5.1 4 1 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF19018 - 2e-13 49.1 0.2 0.017 15.0 0.0 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF19018 - 8.5e-11 42.2 1.5 3.3e-05 24.3 0.5 2.9 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF19018 - 1.6e-07 30.5 2.7 0.048 13.2 0.0 5.0 5 0 0 5 5 5 2 EF hand EF-hand_8 PF13833.6 ORF19018 - 3.3e-06 26.9 0.2 0.067 13.1 0.1 3.6 3 1 0 3 3 3 2 EF-hand domain pair KRAB PF01352.27 ORF19018 - 0.4 10.4 0.1 0.4 10.4 0.1 2.8 3 0 0 3 3 3 0 KRAB box PC-Esterase PF13839.6 ORF18749 - 0.0015 18.4 0.0 0.002 18.0 0.0 1.1 1 0 0 1 1 1 1 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Aminotran_1_2 PF00155.21 ORF17349 - 1.2e-34 120.1 0.1 1.3e-34 119.9 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DUF956 PF06115.11 ORF17349 - 0.064 13.0 0.1 0.16 11.7 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF956) zf-RING_2 PF13639.6 ORF17324 - 5.6e-10 39.4 7.6 8.6e-10 38.8 7.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF17324 - 1.1e-06 28.8 6.2 2.5e-06 27.6 6.2 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF17324 - 1.8e-06 27.6 5.1 1.8e-06 27.6 5.1 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF17324 - 1.8e-06 27.7 7.0 3.3e-06 26.8 7.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF17324 - 7.1e-06 25.9 1.5 7.1e-06 25.9 1.5 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF17324 - 9.6e-05 22.3 6.2 0.00016 21.6 6.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF17324 - 0.00016 21.2 7.0 0.00031 20.3 7.0 1.5 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF17324 - 0.00043 20.3 1.6 0.00081 19.4 1.6 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 ORF17324 - 0.00065 19.5 8.5 0.0014 18.4 8.5 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF17324 - 0.0011 19.1 7.5 0.0031 17.7 7.5 1.8 1 1 0 1 1 1 1 FANCL C-terminal domain Prok-RING_1 PF14446.6 ORF17324 - 0.0021 17.9 2.2 0.0021 17.9 2.2 2.2 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 zf-C3HC4_3 PF13920.6 ORF17324 - 0.0033 17.2 3.6 0.005 16.7 3.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF17324 - 0.0075 16.4 6.2 0.052 13.7 6.1 2.1 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING PHD PF00628.29 ORF17324 - 0.0085 16.0 6.9 0.016 15.1 6.9 1.5 1 0 0 1 1 1 1 PHD-finger RINGv PF12906.7 ORF17324 - 0.015 15.4 6.0 0.029 14.5 6.0 1.5 1 0 0 1 1 1 0 RING-variant domain zf-HC5HC2H_2 PF13832.6 ORF17324 - 0.057 13.6 4.9 0.051 13.7 3.4 1.8 1 1 1 2 2 2 0 PHD-zinc-finger like domain Zn-ribbon_8 PF09723.10 ORF17324 - 0.26 11.4 2.2 0.44 10.7 0.8 2.2 1 1 0 1 1 1 0 Zinc ribbon domain zf-HC5HC2H PF13771.6 ORF17324 - 0.27 11.5 7.7 0.15 12.3 4.7 2.1 1 1 0 2 2 2 0 PHD-like zinc-binding domain DUF3391 PF11871.8 ORF17324 - 0.37 11.3 5.5 6.6 7.3 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) Fer4_22 PF17179.4 ORF17324 - 8.6 7.3 10.0 3.7 8.4 0.6 2.8 1 1 2 3 3 3 0 4Fe-4S dicluster domain Ribosomal_L37e PF01907.19 ORF15655 - 2e-25 88.7 8.7 3.1e-25 88.1 8.7 1.3 1 0 0 1 1 1 1 Ribosomal protein L37e ubiquitin PF00240.23 ORF15655 - 1e-07 31.6 0.0 5.7e-07 29.2 0.0 2.0 1 1 0 1 1 1 1 Ubiquitin family zf-ribbon_3 PF13248.6 ORF15655 - 0.0059 16.0 3.0 0.012 15.0 3.0 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF15655 - 0.026 14.6 1.5 0.045 13.8 1.5 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-NADH-PPase PF09297.11 ORF15655 - 0.075 12.7 4.8 1.4 8.7 5.0 2.3 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain HypA PF01155.19 ORF15655 - 0.081 13.0 0.1 0.1 12.6 0.1 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1595 PF12760.7 ORF15655 - 0.47 10.5 5.1 1.2 9.2 5.1 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 ORF15655 - 0.88 9.4 6.1 2.5 7.9 0.3 2.1 1 1 1 2 2 2 0 zinc-ribbon domain p450 PF00067.22 ORF13129 - 5.6e-09 35.3 0.1 8.4e-09 34.7 0.1 1.3 1 1 0 1 1 1 1 Cytochrome P450 UPF0193 PF05250.11 ORF1168 - 0.0091 15.8 6.6 0.014 15.2 6.6 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0193) DUF1002 PF06207.11 ORF1168 - 9.3 5.7 10.9 19 4.7 10.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1002) Prok-E2_E PF14462.6 ORF11235 - 0.047 13.5 0.1 0.072 12.9 0.1 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family E ZapD PF07072.11 ORF111913 - 0.046 13.5 0.8 2.3 7.9 0.2 2.3 2 0 0 2 2 2 0 Cell division protein Phasin_2 PF09361.10 ORF111628 - 0.021 15.1 1.6 0.024 14.9 0.4 1.6 2 0 0 2 2 2 0 Phasin protein FRG1 PF06229.12 ORF111628 - 0.17 11.6 5.3 0.12 12.1 3.8 1.4 1 1 0 1 1 1 0 FRG1-like domain ABC_trans_N PF14510.6 ORF111628 - 0.28 11.8 3.7 3.9 8.2 0.3 2.6 1 1 1 2 2 2 0 ABC-transporter N-terminal TMEM154 PF15102.6 ORF111592 - 6.4e-05 22.9 0.9 0.00012 22.0 0.9 1.4 1 1 0 1 1 1 1 TMEM154 protein family LRR19-TM PF15176.6 ORF111592 - 0.0032 17.4 1.8 0.0065 16.4 0.1 2.0 1 1 1 2 2 2 1 Leucine-rich repeat family 19 TM domain TMEM132D_C PF15706.5 ORF111592 - 0.0032 17.2 0.7 0.0078 16.0 0.5 1.7 1 1 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF5305 PF17231.2 ORF111592 - 0.0041 16.6 1.7 0.0046 16.4 0.4 1.6 1 1 1 2 2 2 1 Family of unknown function (DUF5305) Protocadherin PF08374.11 ORF111592 - 0.0054 16.7 0.3 0.0084 16.1 0.3 1.4 1 1 0 1 1 1 1 Protocadherin DUF4834 PF16118.5 ORF111592 - 0.0066 17.4 1.7 0.022 15.7 0.0 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4834) TarH PF02203.15 ORF111592 - 0.0085 16.0 0.2 0.028 14.4 0.0 1.7 2 0 0 2 2 2 1 Tar ligand binding domain homologue TMEM51 PF15345.6 ORF111592 - 0.012 15.5 0.3 0.015 15.1 0.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 TssO PF17561.2 ORF111592 - 0.013 15.6 0.0 0.024 14.7 0.0 1.4 1 0 0 1 1 1 0 Type VI secretion system, TssO CSG2 PF16965.5 ORF111592 - 0.015 14.3 0.4 0.016 14.1 0.4 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator SKN1 PF03935.15 ORF111592 - 0.017 13.5 0.0 0.023 13.1 0.0 1.1 1 0 0 1 1 1 0 Beta-glucan synthesis-associated protein (SKN1) SARAF PF06682.12 ORF111592 - 0.027 14.1 0.0 0.03 14.0 0.0 1.0 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Acatn PF13000.7 ORF111592 - 0.034 12.6 0.0 0.04 12.4 0.0 1.1 1 0 0 1 1 1 0 Acetyl-coenzyme A transporter 1 DUF4500 PF14937.6 ORF111592 - 0.037 14.0 0.0 0.077 13.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4500) EphA2_TM PF14575.6 ORF111592 - 0.048 14.5 0.1 0.1 13.5 0.0 1.6 2 0 0 2 2 1 0 Ephrin type-A receptor 2 transmembrane domain SID-1_RNA_chan PF13965.6 ORF111592 - 0.057 11.8 0.2 0.065 11.6 0.2 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 OAD_gamma PF04277.13 ORF111592 - 0.066 13.8 0.0 0.25 12.0 0.0 1.9 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Glycophorin_A PF01102.18 ORF111592 - 0.07 13.4 0.8 0.23 11.7 0.8 1.8 1 1 0 1 1 1 0 Glycophorin A FAM176 PF14851.6 ORF111592 - 0.075 12.7 1.8 0.075 12.7 0.2 1.7 1 1 1 2 2 2 0 FAM176 family DUF4133 PF13571.6 ORF111592 - 0.085 13.2 2.1 0.17 12.3 2.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) TMEM171 PF15471.6 ORF111592 - 0.096 11.7 0.1 0.12 11.3 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein family 171 DUF5093 PF17011.5 ORF111592 - 0.47 10.7 2.4 2.4 8.4 2.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF5093) Orf78 PF06024.12 ORF111592 - 3.1 8.1 7.0 0.46 10.8 0.4 2.1 1 1 1 2 2 2 0 Orf78 (ac78) Ribosomal_L38e PF01781.18 ORF111163 - 0.026 14.6 0.2 0.045 13.9 0.2 1.4 1 1 0 1 1 1 0 Ribosomal L38e protein family Moricin PF06451.11 ORF111163 - 0.083 12.7 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 Moricin VF530 PF09905.9 ORF111163 - 0.12 12.6 0.0 0.29 11.3 0.0 1.7 1 0 0 1 1 1 0 DNA-binding protein VF530 60KD_IMP PF02096.20 ORF111072 - 4e-08 33.3 0.1 5.9e-08 32.8 0.1 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein NPC1_N PF16414.5 ORF10958 - 6.1e-17 62.0 7.5 6.9e-17 61.8 7.5 1.1 1 0 0 1 1 1 1 Niemann-Pick C1 N terminus DUF5487 PF17589.2 ORF109326 - 0.14 12.4 1.0 3 8.1 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5487) Baculo_PEP_C PF04513.12 ORF107640 - 0.0026 17.8 7.7 0.16 12.0 3.3 2.4 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus DUF2710 PF10921.8 ORF107640 - 0.046 14.1 0.1 0.072 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2710) Tfb2_C PF18307.1 ORF107640 - 0.11 12.9 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 Transcription factor Tfb2 (p52) C-terminal domain DUF3958 PF13125.6 ORF107640 - 0.23 11.7 2.3 0.48 10.7 0.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3958) APC_N_CC PF16689.5 ORF106425 - 1.3 9.2 5.8 15 5.8 5.8 2.2 1 1 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain adh_short_C2 PF13561.6 ORF10593 - 1.9e-43 148.7 0.0 2.1e-43 148.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF10593 - 3.4e-29 101.7 0.1 4.1e-29 101.4 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Pox_A9 PF04835.12 ORF105251 - 0.026 14.7 1.6 0.026 14.7 1.6 1.8 2 0 0 2 2 2 0 A9 protein conserved region DNA_binding_2 PF13724.6 ORF105251 - 0.057 13.8 0.0 0.1 13.0 0.0 1.3 1 0 0 1 1 1 0 DNA-binding domain OppC_N PF12911.7 ORF105251 - 0.41 10.7 3.1 2.3 8.2 0.4 2.3 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C PKD_channel PF08016.12 ORF105251 - 0.72 8.5 9.9 0.97 8.0 9.9 1.2 1 0 0 1 1 1 0 Polycystin cation channel Ion_trans PF00520.31 ORF105251 - 2.7 7.1 13.1 4.6 6.4 13.1 1.3 1 0 0 1 1 1 0 Ion transport protein HTH_Tnp_Tc3_2 PF01498.18 ORF103170 - 0.031 14.5 0.0 0.054 13.7 0.0 1.4 1 0 0 1 1 1 0 Transposase Y1_Tnp PF01797.16 ORF103170 - 0.053 13.6 0.3 0.094 12.8 0.3 1.4 1 0 0 1 1 1 0 Transposase IS200 like DDRGK PF09756.9 ORF103170 - 0.056 13.0 0.2 0.092 12.3 0.2 1.4 1 0 0 1 1 1 0 DDRGK domain FAP PF07174.11 ORF101164 - 0.00063 19.3 13.9 0.00077 19.0 13.9 1.1 1 0 0 1 1 1 1 Fibronectin-attachment protein (FAP) Mito_fiss_reg PF05308.11 ORF101164 - 0.0044 17.1 8.0 0.005 16.9 8.0 1.2 1 0 0 1 1 1 1 Mitochondrial fission regulator bZIP_2 PF07716.15 ORF101164 - 0.098 12.8 2.5 0.18 11.9 2.5 1.4 1 0 0 1 1 1 0 Basic region leucine zipper Mucin PF01456.17 ORF101164 - 1.9 8.5 10.1 2.8 7.9 10.1 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein ORC6 PF05460.13 ORF101164 - 4.1 6.6 9.9 4.9 6.3 9.9 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) PEGSRP PF07623.11 NODE_42077_length_484_cov_2.069042_g34481_i0forward_frame_1 - 0.0065 16.2 6.0 0.0065 16.2 6.0 3.3 4 0 0 4 4 4 1 Protein of unknown function (DUF1584) TPR_8 PF13181.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 1.3e-19 68.6 1.3 3.3e-06 26.9 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 5.4e-19 67.2 2.5 5.7e-05 22.8 0.0 4.8 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 9.2e-19 66.0 0.0 7.2e-05 22.6 0.0 4.0 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 2.3e-13 50.2 1.0 3.6e-05 24.0 0.0 3.7 3 1 2 5 5 4 3 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 2.3e-10 40.6 1.5 4.8e-07 29.9 0.4 2.7 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 7.1e-10 38.6 0.5 0.0015 18.7 0.2 4.4 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 1.4e-09 38.4 0.0 0.00051 20.5 0.0 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 1.7e-09 37.1 0.2 0.032 14.2 0.0 4.5 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 2.1e-09 36.9 0.0 8.5e-05 22.2 0.0 3.2 2 1 2 4 4 4 2 TPR repeat TPR_10 PF13374.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 1.1e-07 31.4 0.1 0.058 13.3 0.0 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 5.1e-06 26.5 0.0 0.048 13.8 0.0 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 1.3e-05 25.5 0.0 2.6 8.9 0.0 3.8 3 1 0 3 3 3 2 Tetratricopeptide repeat Clathrin PF00637.20 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 0.00012 21.9 0.1 0.24 11.3 0.0 2.4 1 1 1 2 2 2 2 Region in Clathrin and VPS TPR_14 PF13428.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 0.00053 20.6 0.0 3.3 8.8 0.0 3.2 2 1 2 4 4 4 2 Tetratricopeptide repeat ChAPs PF09295.10 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 0.0022 17.1 0.4 0.57 9.1 0.1 2.1 1 1 1 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) TPR_16 PF13432.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 0.003 18.2 0.0 0.22 12.2 0.0 3.0 2 1 0 3 3 3 1 Tetratricopeptide repeat Paf67 PF10255.9 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 0.0061 15.6 0.3 0.12 11.3 0.3 2.0 1 1 1 2 2 2 1 RNA polymerase I-associated factor PAF67 TPR_15 PF13429.6 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 0.02 14.1 0.0 1.6 7.9 0.0 2.4 1 1 1 2 2 2 0 Tetratricopeptide repeat RPN7 PF10602.9 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 0.04 13.6 2.9 2.6 7.7 0.2 2.6 2 1 1 3 3 3 0 26S proteasome subunit RPN7 PPR PF01535.20 NODE_42070_length_484_cov_2.904232_g34474_i0forward_frame_1 - 0.33 11.3 6.8 3.8 8.0 0.1 4.0 4 1 0 4 4 4 0 PPR repeat Isochorismatase PF00857.20 NODE_42066_length_484_cov_3.536748_g34470_i0reverse_frame_1 - 4.4e-27 95.4 0.0 5.2e-27 95.1 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family Herpes_UL56 PF04534.12 NODE_42060_length_484_cov_5.164811_g34464_i0forward_frame_1 - 1.8 8.0 7.2 2.4 7.6 7.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL56 protein CAP-ZIP_m PF15255.6 NODE_42060_length_484_cov_5.164811_g34464_i0forward_frame_1 - 2 8.7 5.9 3.1 8.1 5.9 1.2 1 0 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region zf-B_box PF00643.24 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 1.6e-08 34.6 8.0 1.6e-08 34.6 8.0 3.7 3 1 0 3 3 3 1 B-box zinc finger zf-RING_2 PF13639.6 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.00072 19.8 3.9 0.00072 19.8 3.9 2.4 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.00074 19.4 3.6 0.00074 19.4 3.6 2.4 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.0023 17.9 3.3 0.0023 17.9 3.3 2.6 3 1 0 3 3 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.0025 17.7 2.5 0.0025 17.7 2.5 3.1 2 2 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Acetone_carb_G PF08882.11 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.0049 17.0 0.8 0.0073 16.4 0.8 1.4 1 0 0 1 1 1 1 Acetone carboxylase gamma subunit zf-C3HC4_4 PF15227.6 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.0057 16.8 3.4 0.0057 16.8 3.4 3.0 3 1 0 3 3 2 1 zinc finger of C3HC4-type, RING zf-ribbon_3 PF13248.6 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.0077 15.6 0.5 0.0077 15.6 0.5 3.3 4 0 0 4 4 4 1 zinc-ribbon domain DUF1272 PF06906.11 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.01 15.9 5.0 0.01 15.9 5.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) zf-C3HC4_2 PF13923.6 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.017 15.0 4.5 0.017 15.0 4.5 2.8 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.7 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.035 14.1 16.1 0.073 13.1 5.2 3.0 1 1 1 2 2 2 0 Double zinc ribbon zf-RING_6 PF14835.6 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 0.18 11.7 8.9 0.058 13.3 1.4 2.3 2 0 0 2 2 2 0 zf-RING of BARD1-type protein FYVE PF01363.21 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 1.8 8.8 15.4 0.74 10.0 2.8 3.3 1 1 1 2 2 2 0 FYVE zinc finger NOB1_Zn_bind PF08772.11 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 1.9 8.7 14.5 3.6 7.8 0.5 3.0 2 1 1 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like zf-piccolo PF05715.13 NODE_42055_length_484_cov_72.723831_g34459_i0forward_frame_1 - 9.7 6.4 14.1 0.13 12.5 1.6 3.0 3 1 0 3 3 3 0 Piccolo Zn-finger ATP-synt_ab_C PF00306.27 NODE_42053_length_484_cov_75.654788_g34457_i0reverse_frame_1 - 5.5e-37 126.9 0.2 7.3e-37 126.5 0.2 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain Acyl-CoA_ox_N PF14749.6 NODE_42050_length_484_cov_85.057906_g34454_i0forward_frame_1 - 0.14 12.7 1.7 0.2 12.2 0.6 1.8 1 1 0 2 2 2 0 Acyl-coenzyme A oxidase N-terminal Homez PF11569.8 NODE_42049_length_484_cov_87.962138_g34453_i0reverse_frame_1 - 0.16 11.5 0.1 0.3 10.6 0.1 1.4 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez DUF1746 PF08508.10 NODE_42039_length_484_cov_149.238307_g34443_i0forward_frame_1 - 0.0013 19.1 2.2 0.0018 18.6 0.6 2.1 1 1 1 2 2 2 1 Fungal domain of unknown function (DUF1746) RCC1_2 PF13540.6 NODE_42034_length_484_cov_237.572383_g34438_i0forward_frame_1 - 5.9e-08 32.3 10.1 0.034 14.0 0.0 4.2 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_42034_length_484_cov_237.572383_g34438_i0forward_frame_1 - 0.00018 21.6 0.1 16 5.5 0.0 4.0 4 0 0 4 4 4 3 Uncharacterised ACR, YagE family COG1723 Phage_holin_2_4 PF16082.5 NODE_42034_length_484_cov_237.572383_g34438_i0forward_frame_1 - 1.6 8.5 6.4 12 5.7 1.5 2.5 2 1 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Peptidase_M28 PF04389.17 NODE_42019_length_485_cov_2.137778_g34425_i0reverse_frame_1 - 0.00047 19.9 0.1 0.00058 19.6 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M28 Fip1 PF05182.13 NODE_42019_length_485_cov_2.137778_g34425_i0reverse_frame_1 - 0.059 12.9 0.2 0.13 11.8 0.2 1.6 1 0 0 1 1 1 0 Fip1 motif Moulting_cycle PF04870.16 NODE_42016_length_485_cov_2.342222_g34422_i0reverse_frame_1 - 0.0048 16.2 0.4 0.0059 15.9 0.4 1.1 1 0 0 1 1 1 1 Moulting cycle EF-hand_1 PF00036.32 NODE_42012_length_485_cov_3.166667_g34418_i0reverse_frame_1 - 0.0089 15.5 0.1 0.021 14.3 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_42012_length_485_cov_3.166667_g34418_i0reverse_frame_1 - 0.01 15.7 0.1 0.032 14.2 0.1 1.8 1 0 0 1 1 1 0 EF-hand domain Dockerin_1 PF00404.18 NODE_42012_length_485_cov_3.166667_g34418_i0reverse_frame_1 - 0.011 15.9 0.1 0.032 14.4 0.0 1.7 2 0 0 2 2 2 0 Dockerin type I domain EF-hand_7 PF13499.6 NODE_42012_length_485_cov_3.166667_g34418_i0reverse_frame_1 - 0.046 14.2 0.1 0.071 13.6 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain pair DUF3099 PF11298.8 NODE_42008_length_485_cov_4.444444_g24367_i1forward_frame_1 - 6.6 7.0 8.1 0.32 11.2 0.6 2.5 2 2 1 3 3 3 0 Protein of unknown function (DUF3099) ALG3 PF05208.13 NODE_42006_length_485_cov_10.044444_g34413_i0reverse_frame_1 - 7.6e-19 68.3 0.4 9.6e-19 68.0 0.4 1.1 1 0 0 1 1 1 1 ALG3 protein Pkinase PF00069.25 NODE_42003_length_485_cov_55.933333_g34410_i0reverse_frame_1 - 2.4e-09 37.0 0.0 3.2e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_42003_length_485_cov_55.933333_g34410_i0reverse_frame_1 - 0.00067 19.0 0.0 0.00091 18.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_42002_length_485_cov_61.515556_g34409_i0reverse_frame_1 - 2e-27 96.2 0.0 2.4e-27 96.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_42002_length_485_cov_61.515556_g34409_i0reverse_frame_1 - 2.1e-21 76.4 0.0 2.6e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_42002_length_485_cov_61.515556_g34409_i0reverse_frame_1 - 0.086 12.1 0.0 0.1 11.9 0.0 1.3 1 0 0 1 1 1 0 Kinase-like DnaJ PF00226.31 NODE_41999_length_485_cov_77.131111_g34406_i0reverse_frame_1 - 1e-22 80.0 1.8 1.9e-22 79.1 1.8 1.5 1 0 0 1 1 1 1 DnaJ domain Peptidase_A22B PF04258.13 NODE_41968_length_485_cov_6623.591111_g34379_i0forward_frame_1 - 4.1 6.8 15.5 8 5.9 15.5 1.5 1 1 0 1 1 1 0 Signal peptide peptidase Flu_PB2 PF00604.17 NODE_41965_length_486_cov_1.782705_g34376_i0reverse_frame_1 - 0.33 8.8 2.4 0.37 8.7 2.4 1.0 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PB2 CorA PF01544.18 NODE_41959_length_486_cov_2.889135_g34370_i0forward_frame_1 - 4.9e-38 131.1 0.0 5.3e-38 131.0 0.0 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Xan_ur_permease PF00860.20 NODE_41958_length_486_cov_3.161863_g34369_i0reverse_frame_1 - 0.01 14.6 0.3 0.012 14.3 0.3 1.1 1 0 0 1 1 1 1 Permease family CCSMST1 PF15013.6 NODE_41958_length_486_cov_3.161863_g34369_i0reverse_frame_1 - 0.053 13.7 0.0 0.13 12.4 0.0 1.7 1 0 0 1 1 1 0 CCSMST1 family FKBP_C PF00254.28 NODE_41945_length_486_cov_72.893570_g34356_i0reverse_frame_1 - 5.5e-08 33.0 0.0 8.8e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Folliculin PF11704.8 NODE_41939_length_486_cov_86.048780_g34350_i0reverse_frame_1 - 0.063 13.2 0.1 0.076 12.9 0.1 1.2 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport LKAAEAR PF15478.6 NODE_41938_length_486_cov_87.101996_g34349_i0reverse_frame_1 - 0.042 14.1 0.8 0.057 13.7 0.8 1.3 1 0 0 1 1 1 0 Family of unknown function with LKAAEAR motif Claudin_2 PF13903.6 NODE_41938_length_486_cov_87.101996_g34349_i0reverse_frame_1 - 0.16 11.7 0.1 0.3 10.8 0.0 1.5 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF1676 PF07898.13 NODE_41922_length_486_cov_627.960089_g34335_i0reverse_frame_1 - 0.027 14.5 0.1 0.034 14.2 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1676) HalX PF08663.10 NODE_41922_length_486_cov_627.960089_g34335_i0reverse_frame_1 - 0.67 10.3 10.5 1.6 9.1 0.3 3.7 1 1 2 3 3 3 0 HalX domain EKAL PF17986.1 NODE_41919_length_486_cov_2756.166297_g11687_i2forward_frame_1 - 0.11 12.6 0.4 0.21 11.7 0.4 1.5 1 0 0 1 1 1 0 EMP3-KAHRP-like N-terminal domain Cytochrome_CBB3 PF13442.6 NODE_41917_length_486_cov_8378.057650_g34332_i0reverse_frame_1 - 2.7e-13 50.0 0.0 4.2e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 NODE_41917_length_486_cov_8378.057650_g34332_i0reverse_frame_1 - 4.1e-05 24.6 0.6 0.00061 20.9 0.6 2.2 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 NODE_41917_length_486_cov_8378.057650_g34332_i0reverse_frame_1 - 0.012 15.3 0.5 0.051 13.3 0.3 1.9 1 1 1 2 2 2 0 Cytochrome c-550 domain DUF3520 PF12034.8 NODE_41913_length_487_cov_2.252212_g34328_i0reverse_frame_3 - 0.03 14.5 2.4 0.053 13.7 2.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3520) Pex24p PF06398.11 NODE_41912_length_487_cov_2.298673_g34327_i0reverse_frame_3 - 0.098 11.6 1.2 0.1 11.5 1.2 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin COX2_TM PF02790.15 NODE_41912_length_487_cov_2.298673_g34327_i0reverse_frame_3 - 2.4 8.3 4.9 10 6.3 1.0 2.1 1 1 1 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain ACAS_N PF16177.5 NODE_41911_length_487_cov_2.305310_g34326_i0forward_frame_2 - 0.13 12.2 0.1 0.3 11.0 0.0 1.6 2 0 0 2 2 2 0 Acetyl-coenzyme A synthetase N-terminus AA_permease_2 PF13520.6 NODE_41907_length_487_cov_3.871681_g34322_i0forward_frame_3 - 9.7e-17 60.9 19.0 1.1e-16 60.7 19.0 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 NODE_41907_length_487_cov_3.871681_g34322_i0forward_frame_3 - 1.9e-08 33.4 14.5 2.3e-08 33.1 14.5 1.0 1 0 0 1 1 1 1 Amino acid permease Tmemb_18A PF09771.9 NODE_41907_length_487_cov_3.871681_g34322_i0forward_frame_3 - 0.044 14.2 0.4 0.074 13.4 0.3 1.4 1 1 0 1 1 1 0 Transmembrane protein 188 XK-related PF09815.9 NODE_41907_length_487_cov_3.871681_g34322_i0forward_frame_3 - 4.5 6.2 11.3 32 3.4 11.3 1.9 1 1 0 1 1 1 0 XK-related protein KicB PF03882.14 NODE_41906_length_487_cov_4.207965_g34321_i0forward_frame_3 - 6.1e-59 197.3 0.1 8.3e-59 196.8 0.1 1.2 1 0 0 1 1 1 1 MukF winged-helix domain MukF_M PF17192.4 NODE_41906_length_487_cov_4.207965_g34321_i0forward_frame_3 - 3.5e-09 36.6 0.0 6.2e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 MukF middle domain HTH_27 PF13463.6 NODE_41906_length_487_cov_4.207965_g34321_i0forward_frame_3 - 0.092 13.2 0.0 0.18 12.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain Piwi PF02171.17 NODE_41901_length_487_cov_49.805310_g34316_i0forward_frame_2 - 2e-14 53.5 1.5 2.4e-14 53.3 1.5 1.0 1 0 0 1 1 1 1 Piwi domain DUF4241 PF14025.6 NODE_41895_length_487_cov_73.535398_g34310_i0forward_frame_3 - 3.1 8.1 6.5 0.37 11.1 0.6 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF4241) zf-rbx1 PF12678.7 NODE_41890_length_487_cov_86.048673_g34305_i0reverse_frame_3 - 0.00086 19.5 0.1 0.0013 19.0 0.1 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_41890_length_487_cov_86.048673_g34305_i0reverse_frame_3 - 0.016 15.0 0.1 0.029 14.2 0.1 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_41890_length_487_cov_86.048673_g34305_i0reverse_frame_3 - 0.019 15.3 0.1 0.029 14.7 0.1 1.3 1 0 0 1 1 1 0 Ring finger domain zf-RING_UBOX PF13445.6 NODE_41890_length_487_cov_86.048673_g34305_i0reverse_frame_3 - 0.098 12.7 0.3 0.19 11.8 0.3 1.4 1 0 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_4 PF15227.6 NODE_41890_length_487_cov_86.048673_g34305_i0reverse_frame_3 - 0.13 12.4 0.1 0.22 11.7 0.1 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING Peptidase_A22B PF04258.13 NODE_41889_length_487_cov_86.258850_g34304_i0forward_frame_2 - 1.9e-15 57.2 0.0 2.2e-15 57.0 0.0 1.1 1 0 0 1 1 1 1 Signal peptide peptidase DUF3335 PF11814.8 NODE_41888_length_487_cov_89.013274_g34303_i0reverse_frame_2 - 0.086 12.3 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 Peptidase_C39 like family Shisa PF13908.6 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 0.019 15.2 0.0 0.025 14.8 0.0 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator TMEM174 PF15029.6 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 0.075 12.7 0.0 0.097 12.4 0.0 1.3 1 0 0 1 1 1 0 Transmembrane protein 174 TRP PF06011.12 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 0.11 11.2 2.3 0.16 10.7 2.3 1.2 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel TMEM132D_C PF15706.5 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 4 7.3 5.3 0.99 9.2 0.6 2.2 2 1 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Pax7 PF12360.8 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_2 - 6.3 7.1 9.9 3.8 7.8 0.9 2.5 2 0 0 2 2 2 0 Paired box protein 7 Med3 PF11593.8 NODE_41865_length_487_cov_319.650442_g34280_i0reverse_frame_2 - 0.74 8.9 6.4 0.83 8.8 6.4 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal SelR PF01641.18 NODE_41863_length_487_cov_412.783186_g34278_i0reverse_frame_2 - 7.1e-20 71.3 0.1 9.4e-20 70.9 0.1 1.2 1 0 0 1 1 1 1 SelR domain Spec3 PF15795.5 NODE_41853_length_487_cov_21260.772124_g34269_i0reverse_frame_3 - 3e-13 50.1 19.4 2.8e-11 43.8 19.4 2.2 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein Rhomboid_SP PF12595.8 NODE_41850_length_488_cov_2.105960_g34266_i0forward_frame_2 - 0.18 11.1 0.1 0.29 10.5 0.1 1.3 1 0 0 1 1 1 0 Rhomboid serine protease AA_permease_2 PF13520.6 NODE_41848_length_488_cov_2.169978_g34264_i0forward_frame_3 - 2.9e-08 33.0 9.0 2.9e-08 33.0 9.0 1.5 2 0 0 2 2 2 1 Amino acid permease DUF4476 PF14771.6 NODE_41846_length_488_cov_2.973510_g34262_i0reverse_frame_3 - 0.012 15.9 0.2 0.019 15.2 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4476) DUF1564 PF07600.11 NODE_41846_length_488_cov_2.973510_g34262_i0reverse_frame_3 - 0.016 14.9 0.2 0.028 14.1 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) HTH_Tnp_Tc5 PF03221.16 NODE_41846_length_488_cov_2.973510_g34262_i0reverse_frame_3 - 0.05 13.6 0.1 0.089 12.8 0.1 1.5 1 1 0 1 1 1 0 Tc5 transposase DNA-binding domain DUF3709 PF12493.8 NODE_41845_length_488_cov_3.163355_g34261_i0forward_frame_3 - 0.066 13.3 4.0 0.19 11.8 3.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3709) DUF4870 PF09685.10 NODE_41844_length_488_cov_3.370861_g34260_i0forward_frame_3 - 0.041 14.0 6.6 0.052 13.7 6.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4870) CitMHS PF03600.16 NODE_41844_length_488_cov_3.370861_g34260_i0forward_frame_3 - 0.053 12.7 0.1 0.053 12.7 0.1 1.0 1 0 0 1 1 1 0 Citrate transporter DUF3311 PF11755.8 NODE_41835_length_488_cov_68.033113_g34251_i0reverse_frame_2 - 0.66 10.0 2.9 1.3 9.0 2.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3311) Mem_trans PF03547.18 NODE_41835_length_488_cov_68.033113_g34251_i0forward_frame_2 - 0.0086 14.5 0.5 0.0092 14.4 0.5 1.1 1 0 0 1 1 1 1 Membrane transport protein DNA_gyraseB PF00204.25 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.016 14.7 2.0 0.025 14.1 1.3 1.6 1 1 0 1 1 1 0 DNA gyrase B TPR_MLP1_2 PF07926.12 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.03 14.4 16.7 1.1 9.4 10.6 2.1 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein Mod_r PF07200.13 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.043 13.9 11.4 0.73 9.9 11.7 2.4 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Sec34 PF04136.15 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.046 13.6 6.0 0.27 11.1 0.3 2.1 1 1 1 2 2 2 0 Sec34-like family DUF4407 PF14362.6 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.081 12.3 12.3 0.11 11.8 12.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SOR_SNZ PF01680.17 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.11 12.3 2.5 0.12 12.1 0.1 2.0 2 1 0 2 2 2 0 SOR/SNZ family Com_YlbF PF06133.11 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.12 13.0 16.2 0.79 10.3 4.7 2.4 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA APG6_N PF17675.1 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.13 12.7 19.8 1.3 9.5 13.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF1664 PF07889.12 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.17 11.9 8.3 1.5 8.9 2.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Golgin_A5 PF09787.9 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.23 10.9 15.3 0.27 10.7 15.3 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 PRKG1_interact PF15898.5 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.33 11.9 15.3 2.4 9.1 14.0 2.2 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Macoilin PF09726.9 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.42 9.1 11.6 0.43 9.1 11.6 1.1 1 0 0 1 1 1 0 Macoilin family DUF3452 PF11934.8 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.46 10.1 2.6 0.75 9.4 2.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) GvpG PF05120.12 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.51 10.4 5.4 2.4 8.2 1.4 2.7 2 1 0 2 2 2 0 Gas vesicle protein G V_ATPase_I PF01496.19 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.77 7.6 8.2 0.88 7.4 8.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TSNAXIP1_N PF15739.5 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.96 9.9 10.7 54 4.2 10.2 2.4 1 1 0 1 1 1 0 Translin-associated factor X-interacting N-terminus Fzo_mitofusin PF04799.13 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 2.6 7.6 8.8 6.9 6.2 4.3 2.4 1 1 2 3 3 3 0 fzo-like conserved region DUF2951 PF11166.8 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 2.6 8.3 12.9 2.6 8.3 1.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) Seryl_tRNA_N PF02403.22 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 2.8 8.2 17.9 82 3.5 0.3 2.8 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Bap31_Bap29_C PF18035.1 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 2.9 8.0 15.9 1.7e+02 2.3 12.1 3.4 2 1 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain Fib_alpha PF08702.10 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 3.1 8.0 9.1 4.3 7.5 8.4 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ZapB PF06005.12 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 4.6 7.8 14.7 34 5.0 13.7 2.5 1 1 0 1 1 1 0 Cell division protein ZapB zf-C3HC4_3 PF13920.6 NODE_41811_length_488_cov_180.090508_g34228_i0reverse_frame_3 - 4.2e-15 55.3 6.9 4.2e-15 55.3 6.9 2.1 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_41811_length_488_cov_180.090508_g34228_i0reverse_frame_3 - 7e-08 32.7 10.3 7e-08 32.7 10.3 2.3 2 0 0 2 2 2 1 Ring finger domain Prok-RING_4 PF14447.6 NODE_41811_length_488_cov_180.090508_g34228_i0reverse_frame_3 - 1.6e-07 31.1 6.7 1.6e-07 31.1 6.7 2.7 3 0 0 3 3 3 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 NODE_41811_length_488_cov_180.090508_g34228_i0reverse_frame_3 - 4.6e-07 29.6 9.0 1.3e-06 28.1 9.0 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_41811_length_488_cov_180.090508_g34228_i0reverse_frame_3 - 5.7e-06 26.1 9.0 5.7e-06 26.1 9.0 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_41811_length_488_cov_180.090508_g34228_i0reverse_frame_3 - 0.00084 19.3 10.0 0.00084 19.3 10.0 3.0 2 1 1 3 3 3 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 NODE_41811_length_488_cov_180.090508_g34228_i0reverse_frame_3 - 0.0077 16.2 6.4 0.0077 16.2 6.4 2.6 3 0 0 3 3 3 1 RING-type zinc-finger Rep_fac-A_C PF08646.10 NODE_41810_length_488_cov_188.894040_g34227_i0forward_frame_3 - 0.13 12.1 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Replication factor-A C terminal domain Sre PF03125.18 NODE_41805_length_488_cov_282.969095_g34223_i0forward_frame_2 - 0.043 13.0 0.4 0.061 12.5 0.4 1.1 1 0 0 1 1 1 0 C. elegans Sre G protein-coupled chemoreceptor PHD_4 PF16866.5 NODE_41797_length_488_cov_3350.969095_g34217_i0forward_frame_2 - 0.037 14.1 1.1 0.083 13.0 1.1 1.7 1 0 0 1 1 1 0 PHD-finger Methyltransf_25 PF13649.6 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 3e-08 34.3 0.0 4.4e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 3.6e-06 26.9 0.0 5.1e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 3.7e-05 24.3 0.0 5.6e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.0017 18.3 0.0 0.0024 17.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.0032 16.8 0.0 0.0045 16.3 0.0 1.3 1 1 0 1 1 1 1 O-methyltransferase domain FtsJ PF01728.19 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.0075 16.4 0.4 0.012 15.7 0.0 1.5 2 0 0 2 2 2 1 FtsJ-like methyltransferase MTS PF05175.14 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.0086 15.6 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Met_10 PF02475.16 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.009 15.8 0.0 0.011 15.4 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_12 PF08242.12 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.011 16.4 0.0 0.017 15.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.013 15.3 0.0 0.016 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CheR PF01739.18 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.022 14.3 0.0 0.041 13.4 0.0 1.4 1 1 0 1 1 1 0 CheR methyltransferase, SAM binding domain UPF0020 PF01170.18 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.044 13.5 0.0 0.05 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.6 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.19 11.6 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.25 10.6 0.0 0.34 10.2 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DEAD PF00270.29 NODE_41790_length_489_cov_2.350220_g34213_i0reverse_frame_2 - 9.7e-28 97.1 0.0 1.1e-27 96.9 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 NODE_41790_length_489_cov_2.350220_g34213_i0reverse_frame_2 - 0.00022 21.3 0.0 0.00025 21.1 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AzlD PF05437.12 NODE_41787_length_489_cov_2.535242_g34210_i0forward_frame_3 - 0.037 14.2 0.4 0.064 13.4 0.4 1.3 1 0 0 1 1 1 0 Branched-chain amino acid transport protein (AzlD) DnaB_C PF03796.15 NODE_41786_length_489_cov_2.572687_g34209_i0reverse_frame_2 - 0.0038 16.6 0.1 0.0056 16.1 0.1 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks133.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks133.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks133.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks133.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase PF00069.25 NODE_41783_length_489_cov_2.711454_g34206_i0reverse_frame_3 - 2.9e-22 79.3 0.0 3.5e-22 79.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_41783_length_489_cov_2.711454_g34206_i0reverse_frame_3 - 1.2e-08 34.5 0.0 1.6e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_41783_length_489_cov_2.711454_g34206_i0reverse_frame_3 - 0.12 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Kinase-like DUF3311 PF11755.8 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 0.019 14.9 2.2 0.019 14.9 2.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3311) UPF0182 PF03699.13 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 0.11 10.6 6.5 0.14 10.3 6.5 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) DUF929 PF06053.11 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 1 8.6 12.0 0.68 9.2 2.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF929) TMEM132D_C PF15706.5 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 2.2 8.1 5.5 4.1 7.2 0.3 2.2 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TadF PF16964.5 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 3.4 7.4 7.3 0.12 12.1 0.2 1.8 2 0 0 2 2 2 0 Putative tight adherence pilin protein F EphA2_TM PF14575.6 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 7 7.6 20.7 10 7.1 4.1 2.3 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Apt1 PF10351.9 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_2 - 0.23 10.3 3.0 0.22 10.4 3.0 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain RhoGEF67_u1 PF16615.5 NODE_41774_length_489_cov_51.951542_g34197_i0reverse_frame_2 - 6.7 7.3 8.5 11 6.6 1.2 2.8 3 0 0 3 3 3 0 Unstructured region one on RhoGEF 6 and 7 7TMR-DISM_7TM PF07695.11 NODE_41757_length_489_cov_125.068282_g34180_i0reverse_frame_2 - 0.63 9.9 9.8 0.96 9.3 9.8 1.3 1 0 0 1 1 1 0 7TM diverse intracellular signalling DPPIV_N PF00930.21 NODE_41757_length_489_cov_125.068282_g34180_i0forward_frame_2 - 0.048 12.4 0.0 0.064 12.0 0.0 1.1 1 0 0 1 1 1 0 Dipeptidyl peptidase IV (DPP IV) N-terminal region RNaseH_like PF04308.12 NODE_41755_length_489_cov_156.722467_g34178_i0forward_frame_3 - 0.019 14.9 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 Ribonuclease H-like Erf4 PF10256.9 NODE_41753_length_489_cov_178.656388_g34176_i0forward_frame_2 - 1.4e-05 25.2 0.0 1.9e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family AC_N PF16214.5 NODE_41750_length_489_cov_311.328194_g34173_i0reverse_frame_3 - 0.26 10.4 1.0 0.34 10.0 1.0 1.3 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF3368 PF11848.8 NODE_41740_length_489_cov_1952.433921_g34165_i0reverse_frame_3 - 0.02 14.6 0.0 0.035 13.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3368) PHD_4 PF16866.5 NODE_41738_length_489_cov_3437.466960_g34163_i0forward_frame_3 - 0.03 14.4 0.4 0.079 13.1 0.4 1.7 1 0 0 1 1 1 0 PHD-finger HMG_box PF00505.19 NODE_41737_length_489_cov_3728.867841_g34162_i0reverse_frame_3 - 7.1e-09 36.0 0.4 1.3e-08 35.1 0.4 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_41737_length_489_cov_3728.867841_g34162_i0reverse_frame_3 - 7.3e-05 23.3 0.2 0.00014 22.4 0.2 1.4 1 0 0 1 1 1 1 HMG-box domain APG17 PF04108.12 NODE_41736_length_489_cov_4092.724670_g25447_i4reverse_frame_2 - 0.0085 15.3 0.3 0.0093 15.1 0.3 1.0 1 0 0 1 1 1 1 Autophagy protein Apg17 CLZ PF16526.5 NODE_41736_length_489_cov_4092.724670_g25447_i4reverse_frame_2 - 0.15 12.4 0.2 0.15 12.4 0.2 1.9 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels FIT1_2 PF17357.2 NODE_41735_length_489_cov_5133.367841_g34161_i0forward_frame_2 - 0.33 11.1 5.4 7.9 6.6 1.1 2.2 2 0 0 2 2 2 0 Facilitor Of iron transport 1 and 2 WXG100 PF06013.12 ORF99040 - 0.03 14.5 0.0 19 5.6 0.0 2.9 1 1 2 3 3 3 0 Proteins of 100 residues with WXG Bclx_interact PF08945.10 ORF99040 - 0.088 12.6 0.0 85 3.0 0.0 3.2 3 0 0 3 3 3 0 Bcl-x interacting, BH3 domain L_HMGIC_fpl PF10242.9 ORF99040 - 0.12 12.6 0.0 50 4.0 0.0 3.0 1 1 2 3 3 3 0 Lipoma HMGIC fusion partner-like protein Sulfakinin PF08257.11 ORF99040 - 0.13 12.3 10.4 1.1e+02 3.5 0.0 5.5 6 0 0 6 6 6 0 Sulfakinin family Phage_Coat_A PF05357.13 ORF99040 - 0.15 11.9 0.0 59 3.5 0.0 3.1 3 0 0 3 3 3 0 Phage Coat Protein A Msg2_C PF12373.8 ORF99040 - 0.25 10.8 10.6 11 5.6 0.1 3.7 4 0 0 4 4 4 0 Major surface glycoprotein 2 C terminal MatE PF01554.18 ORF97959 - 0.0022 17.7 0.2 0.0022 17.7 0.2 1.5 2 0 0 2 2 2 1 MatE Cyt-b5 PF00173.28 ORF9635 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF9635 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Hydrolase PF00702.26 ORF96180 - 1.9e-11 44.6 0.0 2.2e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cytochrome_CBB3 PF13442.6 ORF96028 - 6.5e-16 58.4 0.1 1.1e-15 57.7 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF96028 - 4.2e-07 31.0 0.6 4.9e-06 27.6 0.6 2.1 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF96028 - 8.2e-05 22.3 0.3 0.00031 20.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain FpoO PF10621.9 ORF96028 - 0.076 13.3 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO DUF2613 PF11021.8 ORF96028 - 1.7 8.8 8.2 0.34 11.1 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) Sugar_tr PF00083.24 ORF95623 - 7.9e-05 21.7 0.1 8.5e-05 21.6 0.1 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter OATP PF03137.20 ORF95623 - 0.0098 14.2 3.7 0.084 11.1 3.7 2.0 1 1 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family Cyt-b5 PF00173.28 ORF94683 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF94683 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Nuc_sug_transp PF04142.15 ORF93518 - 2.7e-07 30.1 1.7 2.9e-07 30.0 1.7 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF2244 PF10003.9 ORF93518 - 0.076 12.7 0.3 0.39 10.4 0.0 2.1 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) PEMT PF04191.13 ORF93518 - 0.59 10.6 7.0 0.13 12.7 1.2 2.4 2 1 1 3 3 3 0 Phospholipid methyltransferase RRM_1 PF00076.22 ORF93144 - 3.5e-09 36.3 0.3 6.4e-09 35.5 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF93144 - 0.01 15.4 0.0 0.014 15.0 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF93144 - 0.12 12.5 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif Patatin PF01734.22 ORF92378 - 2.7e-17 63.6 0.1 8.5e-17 62.0 0.1 1.7 1 1 0 1 1 1 1 Patatin-like phospholipase Cyt-b5 PF00173.28 ORF90925 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF90925 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF569 PF04601.13 ORF90692 - 0.11 12.2 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF569) TSA PF03249.13 ORF90668 - 0.19 10.5 0.7 0.26 10.0 0.7 1.2 1 0 0 1 1 1 0 Type specific antigen Cyt-b5 PF00173.28 ORF89622 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF89622 - 0.23 12.0 0.9 1.2 9.7 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF88795 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF88795 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Thioredoxin PF00085.20 ORF88488 - 1.1e-07 31.8 0.0 1.3e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF88488 - 0.0079 16.6 0.0 0.018 15.5 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF88488 - 0.022 15.1 0.0 1.2 9.5 0.0 2.2 1 1 1 2 2 2 0 Thioredoxin-like DUF1223 PF06764.11 ORF88488 - 0.08 13.0 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1223) HyaE PF07449.11 ORF88488 - 0.092 12.7 0.0 0.13 12.3 0.0 1.4 1 1 0 1 1 1 0 Hydrogenase-1 expression protein HyaE OST3_OST6 PF04756.13 ORF88488 - 0.1 11.9 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family TraF PF13728.6 ORF88488 - 0.19 11.5 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein Ocular_alb PF02101.15 ORF88379 - 0.11 11.3 0.0 4.4 6.1 0.0 2.0 2 0 0 2 2 2 0 Ocular albinism type 1 protein Nramp PF01566.18 ORF88356 - 7.9e-30 104.0 0.8 7.9e-30 104.0 0.8 1.9 1 1 1 2 2 2 1 Natural resistance-associated macrophage protein Colicin_V PF02674.16 ORF87207 - 1.4e-35 122.3 14.0 1.7e-35 122.1 14.0 1.0 1 0 0 1 1 1 1 Colicin V production protein AC_N PF16214.5 ORF87207 - 1.4 7.9 6.4 1.9 7.6 6.4 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region EF-hand_7 PF13499.6 ORF86857 - 1.5e-30 105.4 2.7 1.5e-15 57.4 1.4 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF86857 - 1.5e-26 89.9 6.3 2.8e-06 26.5 0.3 4.2 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF86857 - 5.2e-23 79.0 3.5 1.6e-05 24.5 0.1 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF86857 - 9e-23 79.9 2.4 1.1e-10 41.2 0.1 3.3 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF86857 - 3.3e-14 51.6 6.1 0.0025 17.2 0.1 4.7 4 1 0 4 4 4 3 EF hand SPARC_Ca_bdg PF10591.9 ORF86857 - 3.3e-05 24.2 0.4 0.23 11.8 0.0 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF86857 - 5.5e-05 23.4 0.1 0.2 12.0 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF86857 - 0.00012 22.0 1.3 0.041 13.8 0.2 2.1 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand DUF3349 PF11829.8 ORF86857 - 0.0017 19.1 0.3 0.63 10.9 0.2 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3349) Ribosomal_L9_C PF03948.14 ORF86857 - 0.0033 17.9 1.1 0.045 14.2 0.3 2.2 2 0 0 2 2 2 1 Ribosomal protein L9, C-terminal domain PMBR PF09373.10 ORF86857 - 0.011 15.8 0.1 24 5.3 0.0 3.5 3 0 0 3 3 3 0 Pseudomurein-binding repeat DUF2666 PF10869.8 ORF86857 - 0.015 15.5 4.2 0.5 10.6 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 ORF86857 - 0.016 13.8 0.1 0.53 8.7 0.0 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5580) Sigma54_CBD PF04963.13 ORF86857 - 0.03 14.2 1.0 0.78 9.6 0.3 2.0 1 1 1 2 2 2 0 Sigma-54 factor, core binding domain SurA_N_2 PF13623.6 ORF86857 - 0.036 13.9 1.2 0.93 9.4 0.1 2.5 1 1 0 2 2 2 0 SurA N-terminal domain Caleosin PF05042.13 ORF86857 - 0.039 13.9 1.4 5.9 6.8 0.0 3.1 1 1 1 2 2 2 0 Caleosin related protein DUF1456 PF07308.13 ORF86857 - 0.046 14.0 0.6 4.2 7.8 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1456) EF-hand_11 PF08976.11 ORF86857 - 0.052 14.4 0.2 5.1 8.0 0.0 2.2 1 1 0 2 2 2 0 EF-hand domain Peptidase_S46 PF10459.9 ORF86857 - 0.063 11.9 0.7 0.069 11.8 0.7 1.0 1 0 0 1 1 1 0 Peptidase S46 Toprim_2 PF13155.6 ORF86857 - 0.063 13.7 1.4 3.6 8.1 0.3 2.6 1 1 2 3 3 3 0 Toprim-like RST PF12174.8 ORF86857 - 0.082 12.8 0.8 4.8 7.2 0.1 3.1 2 1 1 4 4 4 0 RCD1-SRO-TAF4 (RST) plant domain EF-hand_10 PF14788.6 ORF86857 - 0.12 12.2 5.1 7.4 6.5 0.0 3.7 3 2 1 4 4 4 0 EF hand UPF0223 PF05256.12 ORF86857 - 0.14 12.5 1.3 1.3 9.4 0.1 2.3 1 1 0 2 2 2 0 Uncharacterised protein family (UPF0223) HTH_12 PF08461.10 ORF86857 - 0.16 11.9 1.7 8.3 6.4 0.1 2.6 2 1 0 2 2 2 0 Ribonuclease R winged-helix domain AFG1_ATPase PF03969.16 ORF85982 - 2.4e-14 53.0 0.0 3e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 AFG1-like ATPase AAA_22 PF13401.6 ORF85982 - 0.00022 21.5 0.0 0.0019 18.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 ORF85982 - 0.00068 20.1 0.0 0.0019 18.6 0.0 1.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Torsin PF06309.11 ORF85982 - 0.005 17.0 0.0 0.008 16.3 0.0 1.3 1 0 0 1 1 1 1 Torsin AAA_16 PF13191.6 ORF85982 - 0.0095 16.3 0.0 0.015 15.7 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain RNA_helicase PF00910.22 ORF85982 - 0.031 14.7 0.0 0.07 13.5 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 ORF85982 - 0.042 13.4 0.0 0.06 12.9 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 ORF85982 - 0.1 12.6 0.0 0.91 9.5 0.0 2.2 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) SPT2 PF08243.11 ORF85303 - 0.066 13.7 0.8 0.1 13.1 0.8 1.2 1 0 0 1 1 1 0 SPT2 chromatin protein Cyt-b5 PF00173.28 ORF82763 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF82763 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 GTP_EFTU_D3 PF03143.17 ORF82579 - 2.7e-14 53.4 0.0 1.1e-13 51.5 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF82579 - 0.086 13.2 0.0 0.21 12.0 0.0 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 2 FA_desaturase PF00487.24 ORF82352 - 0.09 12.6 0.2 0.13 12.1 0.2 1.2 1 0 0 1 1 1 0 Fatty acid desaturase C2 PF00168.30 ORF82238 - 0.00019 21.7 0.0 0.0004 20.6 0.0 1.5 2 0 0 2 2 2 1 C2 domain ABC_membrane PF00664.23 ORF8219 - 1.2e-19 71.1 9.2 1.3e-19 70.9 9.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF5566 PF17721.1 ORF8219 - 0.17 12.2 0.1 0.25 11.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5566) DUF4355 PF14265.6 ORF82052 - 0.43 10.8 16.1 0.83 9.9 15.5 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4355) AAA_23 PF13476.6 ORF82052 - 0.55 10.7 14.2 0.69 10.4 14.2 1.1 1 0 0 1 1 1 0 AAA domain CemA PF03040.14 ORF82052 - 0.84 9.5 4.0 1.1 9.2 4.0 1.3 1 0 0 1 1 1 0 CemA family CID_GANP PF16766.5 ORF81887 - 0.14 12.3 0.2 2.6 8.3 0.0 2.2 2 0 0 2 2 2 0 Binding region of GANP to ENY2 Nuc_sug_transp PF04142.15 ORF81557 - 2.7e-07 30.1 1.7 2.9e-07 30.0 1.7 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF2244 PF10003.9 ORF81557 - 0.076 12.7 0.3 0.39 10.4 0.0 2.1 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) PEMT PF04191.13 ORF81557 - 0.59 10.6 7.0 0.13 12.7 1.2 2.4 2 1 1 3 3 3 0 Phospholipid methyltransferase PPR_2 PF13041.6 ORF80939 - 5.6e-13 48.9 0.0 5.3e-05 23.3 0.0 2.5 2 0 0 2 2 2 2 PPR repeat family PPR PF01535.20 ORF80939 - 3.3e-11 42.7 0.1 0.00026 21.0 0.0 3.9 4 0 0 4 4 4 3 PPR repeat PPR_1 PF12854.7 ORF80939 - 4.5e-06 26.3 0.0 0.61 9.8 0.0 3.6 3 0 0 3 3 3 3 PPR repeat PPR_3 PF13812.6 ORF80939 - 2e-05 24.6 0.0 0.044 13.9 0.0 2.5 2 1 0 2 2 2 2 Pentatricopeptide repeat domain Symplekin_C PF12295.8 ORF80939 - 0.074 13.1 0.4 0.11 12.6 0.4 1.2 1 0 0 1 1 1 0 Symplekin tight junction protein C terminal TPR_7 PF13176.6 ORF80939 - 0.1 12.6 0.0 0.66 10.1 0.0 2.4 4 0 0 4 4 4 0 Tetratricopeptide repeat COX5A PF02284.16 ORF80939 - 0.19 11.8 0.0 4.8 7.3 0.0 2.1 1 1 1 2 2 2 0 Cytochrome c oxidase subunit Va PTPLA PF04387.14 ORF80838 - 0.19 11.5 0.0 0.31 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA DSPc PF00782.20 ORF80834 - 1.1e-12 47.9 0.0 1.5e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain MutS_V PF00488.21 ORF80686 - 3.4e-41 141.4 0.1 4.1e-41 141.1 0.1 1.1 1 0 0 1 1 1 1 MutS domain V YscK PF06578.12 ORF80686 - 0.075 12.5 0.0 0.1 12.1 0.0 1.3 1 1 0 1 1 1 0 YOP proteins translocation protein K (YscK) PI3_PI4_kinase PF00454.27 ORF79912 - 0.0027 17.5 0.0 0.39 10.5 0.0 2.2 1 1 1 2 2 2 2 Phosphatidylinositol 3- and 4-kinase Nuc_sug_transp PF04142.15 ORF78336 - 1.6e-07 30.8 1.0 1.7e-07 30.7 1.0 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF3935 PF13071.6 ORF78336 - 0.057 14.0 1.4 0.057 14.0 1.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3935) Cyt-b5 PF00173.28 ORF77303 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF77303 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 UQ_con PF00179.26 ORF77302 - 3e-48 163.0 0.0 3.4e-48 162.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF77302 - 0.13 12.6 0.9 0.25 11.6 0.6 1.8 1 1 1 2 2 2 0 RWD domain Orf78 PF06024.12 ORF76847 - 0.039 14.3 6.1 0.06 13.7 6.1 1.2 1 0 0 1 1 1 0 Orf78 (ac78) DUF5401 PF17380.2 ORF76847 - 0.058 11.5 0.6 0.068 11.2 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) CENP-N PF05238.13 ORF76712 - 0.022 14.1 1.2 0.025 13.9 1.2 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like TPR_19 PF14559.6 ORF76712 - 0.052 14.1 0.6 11 6.6 0.2 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat CrgA PF06781.12 ORF76712 - 0.13 12.3 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Cell division protein CrgA TPR_5 PF12688.7 ORF76712 - 0.13 12.5 0.1 0.29 11.4 0.1 1.7 1 1 0 1 1 1 0 Tetratrico peptide repeat TPR_12 PF13424.6 ORF76712 - 0.13 12.5 0.7 2.6 8.4 0.0 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Connexin PF00029.19 ORF76712 - 0.17 11.7 0.1 0.17 11.6 0.1 1.1 1 0 0 1 1 1 0 Connexin VIR_N PF15912.5 ORF76712 - 0.18 11.3 3.3 0.21 11.2 3.3 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal U79_P34 PF03064.16 ORF76712 - 0.35 10.2 6.2 0.38 10.1 6.2 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Vps39_1 PF10366.9 ORF76712 - 0.37 11.1 2.5 0.63 10.4 0.2 2.2 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 1 Cytomega_UL84 PF06284.11 ORF76712 - 0.8 8.1 4.3 0.92 7.9 4.3 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein UBN_AB PF14075.6 ORF76712 - 1.3 8.7 10.8 0.44 10.2 7.5 1.7 1 1 0 1 1 1 0 Ubinuclein conserved middle domain ABC_ATPase PF09818.9 ORF76260 - 0.34 9.7 7.2 1 8.1 7.3 1.5 1 1 0 1 1 1 0 Predicted ATPase of the ABC class ORF6N PF10543.9 ORF76260 - 8.9 6.6 10.2 77 3.6 10.1 2.6 1 1 0 1 1 1 0 ORF6N domain FAM60A PF15396.6 ORF74502 - 0.067 13.2 6.9 0.084 12.9 6.9 1.2 1 0 0 1 1 1 0 Protein Family FAM60A DUF4934 PF16288.5 ORF74382 - 0.095 12.6 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4934) ABC2_membrane_3 PF12698.7 ORF74382 - 4 6.5 15.4 3.3 6.7 14.1 1.4 1 1 1 2 2 2 0 ABC-2 family transporter protein Ank_4 PF13637.6 ORF74282 - 0.00089 19.8 0.1 0.023 15.3 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF74282 - 0.0096 16.5 0.3 0.017 15.7 0.3 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) ArfGap PF01412.18 ORF74282 - 0.011 15.8 2.2 0.011 15.8 2.2 1.9 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf Ank_3 PF13606.6 ORF74282 - 0.14 12.8 0.4 2.6 8.9 0.0 2.6 2 0 0 2 2 2 0 Ankyrin repeat DUF262 PF03235.14 ORF74282 - 0.61 10.2 8.6 0.79 9.9 8.6 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF262 DUF1320 PF07030.12 ORF74007 - 0.11 12.6 0.1 0.22 11.6 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1320) DUF3242 PF11586.8 ORF72753 - 0.0015 18.3 0.9 0.0015 18.3 0.9 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3242) PTPLA PF04387.14 ORF72387 - 0.19 11.5 0.0 0.31 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA DUF3741 PF12552.8 ORF71849 - 0.028 14.4 2.4 0.15 12.1 0.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3741) DUF2203 PF09969.9 ORF71849 - 0.041 14.6 1.3 0.075 13.8 1.2 1.7 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Calsarcin PF05556.11 ORF69463 - 0.0019 17.8 0.3 0.0022 17.6 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-binding protein (Calsarcin) Fig1 PF12351.8 ORF68237 - 0.024 14.5 0.2 0.029 14.3 0.2 1.2 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 Hexapep PF00132.24 ORF68204 - 3.6e-09 36.0 14.1 8.9e-08 31.6 4.0 3.1 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF68204 - 2.3e-05 24.0 6.9 2.3e-05 24.0 6.9 2.7 3 1 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase TetR_C_2 PF08361.11 ORF68002 - 0.15 12.1 1.4 0.25 11.4 1.4 1.3 1 0 0 1 1 1 0 MAATS-type transcriptional repressor, C-terminal region EF-hand_1 PF00036.32 ORF67045 - 5.5e-09 35.0 0.0 0.0014 18.0 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF67045 - 1e-08 34.4 0.1 0.00054 19.7 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF67045 - 3.1e-07 29.6 0.1 0.017 14.6 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF67045 - 2e-05 24.9 0.1 0.079 13.4 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF67045 - 0.0029 17.4 0.1 2.7 7.9 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF67045 - 0.12 12.7 0.0 0.31 11.4 0.0 1.6 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Cyt-b5 PF00173.28 ORF65441 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF65441 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Ras PF00071.22 ORF64756 - 8.5e-40 136.0 0.2 1e-39 135.7 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF64756 - 1.8e-19 70.1 0.1 2.7e-19 69.6 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF64756 - 9e-12 44.8 0.1 1.2e-11 44.4 0.1 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF64756 - 1.1e-05 25.0 0.0 2.1e-05 24.2 0.0 1.3 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain B1 PF02246.15 ORF64756 - 0.072 13.1 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein L b1 domain Cyt-b5 PF00173.28 ORF64587 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF64587 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Thioredoxin PF00085.20 ORF64021 - 4.2e-28 97.3 0.1 5.6e-28 96.9 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF64021 - 6.3e-07 29.8 0.1 2.3e-06 28.0 0.1 1.8 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_9 PF14595.6 ORF64021 - 2.9e-05 23.8 0.0 3.9e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF64021 - 8.3e-05 22.8 0.0 0.00032 21.0 0.0 1.8 1 1 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF64021 - 0.0017 17.8 0.0 0.0025 17.2 0.0 1.2 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Redoxin PF08534.10 ORF64021 - 0.0017 18.1 0.2 0.11 12.2 0.1 2.1 1 1 1 2 2 2 1 Redoxin TraF PF13728.6 ORF64021 - 0.005 16.7 0.0 0.0055 16.6 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_7 PF13899.6 ORF64021 - 0.0085 16.3 0.0 0.014 15.6 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like Phosducin PF02114.16 ORF64021 - 0.013 14.4 0.0 0.017 14.1 0.0 1.1 1 0 0 1 1 1 0 Phosducin AhpC-TSA PF00578.21 ORF64021 - 0.014 15.4 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA family Glutaredoxin PF00462.24 ORF64021 - 0.096 12.9 0.2 0.19 12.0 0.2 1.5 1 1 0 1 1 1 0 Glutaredoxin DUF4133 PF13571.6 ORF63868 - 0.039 14.3 0.1 0.054 13.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) Cyt-b5 PF00173.28 ORF63301 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DUF1732 PF08340.11 ORF61944 - 0.0068 16.4 3.4 0.0068 16.4 3.4 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF1732) Sec8_exocyst PF04048.14 ORF61944 - 0.012 15.5 9.5 0.013 15.4 2.3 2.1 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain DUF812 PF05667.11 ORF61944 - 0.029 13.3 13.2 0.032 13.1 13.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Fez1 PF06818.15 ORF61944 - 0.11 13.0 11.5 0.13 12.7 10.9 1.4 1 1 0 1 1 1 0 Fez1 DUF724 PF05266.14 ORF61944 - 0.19 11.5 14.5 2.9 7.7 6.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) YabA PF06156.13 ORF61944 - 0.63 10.7 11.9 0.1 13.3 5.8 2.1 1 1 1 2 2 2 0 Initiation control protein YabA CCAP PF11105.8 ORF61944 - 0.67 9.9 5.3 0.16 11.9 1.9 1.6 2 0 0 2 2 2 0 Arthropod cardioacceleratory peptide 2a DivIC PF04977.15 ORF61944 - 0.77 9.6 12.0 3.7 7.4 3.6 2.5 2 0 0 2 2 2 0 Septum formation initiator Spc7 PF08317.11 ORF61944 - 0.94 8.3 16.9 0.92 8.3 13.0 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF5339 PF17274.2 ORF61944 - 2.2 9.2 7.3 8.8 7.3 0.6 2.8 2 1 1 3 3 3 0 Family of unknown function (DUF5339) Phlebovirus_NSM PF07246.11 ORF61944 - 2.3 7.5 14.9 1.4 8.3 3.3 2.0 1 1 1 2 2 2 0 Phlebovirus nonstructural protein NS-M CENP-H PF05837.12 ORF61944 - 3.2 8.2 10.2 17 5.8 9.5 2.0 1 1 0 1 1 1 0 Centromere protein H (CENP-H) APG6_N PF17675.1 ORF61944 - 4.8 7.7 20.2 1.9 9.0 14.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF61944 - 5.5 4.8 9.1 6.9 4.5 9.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 ORF61944 - 6.3 6.8 10.0 1.6 8.8 2.7 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Glu-tRNAGln PF02686.15 ORF61944 - 7.8 6.9 7.9 3.3 8.1 0.2 3.3 2 1 1 3 3 3 0 Glu-tRNAGln amidotransferase C subunit DUF4446 PF14584.6 ORF61944 - 9.5 6.2 9.0 5.7 6.9 1.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Shisa PF13908.6 ORF61081 - 0.015 15.6 0.2 0.019 15.2 0.2 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Bap31 PF05529.12 ORF61081 - 0.072 12.9 1.5 0.095 12.6 1.0 1.4 1 1 0 1 1 1 0 Bap31/Bap29 transmembrane region Peptidase_S49_N PF08496.10 ORF61081 - 0.27 11.3 1.6 0.29 11.2 0.3 1.6 1 1 1 2 2 2 0 Peptidase family S49 N-terminal Cecropin PF00272.19 ORF59427 - 6.1 6.7 7.3 0.34 10.6 1.1 2.2 2 1 1 3 3 3 0 Cecropin family Cyt-b5 PF00173.28 ORF58353 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF58353 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 MDH PF02315.16 ORF57833 - 0.009 16.1 0.0 0.013 15.6 0.0 1.3 1 0 0 1 1 1 1 Methanol dehydrogenase beta subunit Ccdc124 PF06244.12 ORF57475 - 0.052 14.1 0.1 0.072 13.7 0.1 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 124 /Oxs1 EF-hand_7 PF13499.6 ORF57473 - 1.5e-30 105.4 2.7 1.5e-15 57.4 1.4 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF57473 - 1.5e-26 89.9 6.3 2.8e-06 26.5 0.3 4.2 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF57473 - 5.2e-23 79.0 3.5 1.6e-05 24.5 0.1 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF57473 - 9e-23 79.9 2.4 1.1e-10 41.2 0.1 3.3 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF57473 - 3.3e-14 51.6 6.1 0.0025 17.2 0.1 4.7 4 1 0 4 4 4 3 EF hand SPARC_Ca_bdg PF10591.9 ORF57473 - 3.3e-05 24.2 0.4 0.23 11.8 0.0 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF57473 - 5.5e-05 23.4 0.1 0.2 12.0 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF57473 - 0.00012 22.0 1.3 0.041 13.8 0.2 2.1 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand DUF3349 PF11829.8 ORF57473 - 0.0017 19.1 0.3 0.63 10.9 0.2 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3349) Ribosomal_L9_C PF03948.14 ORF57473 - 0.0033 17.9 1.1 0.045 14.2 0.3 2.2 2 0 0 2 2 2 1 Ribosomal protein L9, C-terminal domain PMBR PF09373.10 ORF57473 - 0.011 15.8 0.1 24 5.3 0.0 3.5 3 0 0 3 3 3 0 Pseudomurein-binding repeat DUF2666 PF10869.8 ORF57473 - 0.015 15.5 4.2 0.5 10.6 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 ORF57473 - 0.016 13.8 0.1 0.53 8.7 0.0 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5580) Sigma54_CBD PF04963.13 ORF57473 - 0.03 14.2 1.0 0.78 9.6 0.3 2.0 1 1 1 2 2 2 0 Sigma-54 factor, core binding domain SurA_N_2 PF13623.6 ORF57473 - 0.036 13.9 1.2 0.93 9.4 0.1 2.5 1 1 0 2 2 2 0 SurA N-terminal domain Caleosin PF05042.13 ORF57473 - 0.039 13.9 1.4 5.9 6.8 0.0 3.1 1 1 1 2 2 2 0 Caleosin related protein DUF1456 PF07308.13 ORF57473 - 0.046 14.0 0.6 4.2 7.8 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1456) EF-hand_11 PF08976.11 ORF57473 - 0.052 14.4 0.2 5.1 8.0 0.0 2.2 1 1 0 2 2 2 0 EF-hand domain Peptidase_S46 PF10459.9 ORF57473 - 0.063 11.9 0.7 0.069 11.8 0.7 1.0 1 0 0 1 1 1 0 Peptidase S46 Toprim_2 PF13155.6 ORF57473 - 0.063 13.7 1.4 3.6 8.1 0.3 2.6 1 1 2 3 3 3 0 Toprim-like RST PF12174.8 ORF57473 - 0.082 12.8 0.8 4.8 7.2 0.1 3.1 2 1 1 4 4 4 0 RCD1-SRO-TAF4 (RST) plant domain EF-hand_10 PF14788.6 ORF57473 - 0.12 12.2 5.1 7.4 6.5 0.0 3.7 3 2 1 4 4 4 0 EF hand UPF0223 PF05256.12 ORF57473 - 0.14 12.5 1.3 1.3 9.4 0.1 2.3 1 1 0 2 2 2 0 Uncharacterised protein family (UPF0223) HTH_12 PF08461.10 ORF57473 - 0.16 11.9 1.7 8.3 6.4 0.1 2.6 2 1 0 2 2 2 0 Ribonuclease R winged-helix domain Cyt-b5 PF00173.28 ORF57401 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF57401 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF57167 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF57167 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF4473 PF14747.6 ORF57123 - 0.077 13.6 0.1 0.25 11.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4473) Cyt-b5 PF00173.28 ORF56571 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain ISK_Channel PF02060.15 ORF54973 - 0.14 11.9 0.3 0.31 10.7 0.0 1.7 2 0 0 2 2 2 0 Slow voltage-gated potassium channel P5-ATPase PF12409.8 ORF54973 - 1.4 9.0 6.5 0.57 10.3 3.4 1.9 1 1 1 2 2 2 0 P5-type ATPase cation transporter PI3_PI4_kinase PF00454.27 ORF54827 - 0.0027 17.5 0.0 0.39 10.5 0.0 2.2 1 1 1 2 2 2 2 Phosphatidylinositol 3- and 4-kinase Cnd1 PF12717.7 ORF5461 - 0.16 12.0 2.3 0.46 10.5 0.6 2.1 1 1 1 2 2 2 0 non-SMC mitotic condensation complex subunit 1 SnAC PF14619.6 ORF53170 - 1.4e-08 35.2 3.1 1.4e-08 35.2 3.1 3.1 2 1 1 3 3 3 1 Snf2-ATP coupling, chromatin remodelling complex Cyt-b5 PF00173.28 ORF52506 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF52506 - 0.16 12.5 1.0 0.82 10.2 0.3 2.2 2 1 0 2 2 2 0 Pet100 zf-UBR PF02207.20 ORF52372 - 0.26 11.5 4.3 0.89 9.8 2.5 2.2 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) TNFR_16_TM PF18422.1 ORF51991 - 0.12 12.4 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain UPF0547 PF10571.9 ORF51991 - 0.24 11.5 0.6 0.24 11.5 0.6 1.9 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DB PF01682.19 ORF5136 - 0.3 11.4 4.3 0.67 10.3 0.1 2.3 2 0 0 2 2 2 0 DB module Glycos_transf_1 PF00534.20 ORF50410 - 1.6e-14 53.8 0.0 2.1e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF50410 - 2.8e-09 37.5 0.0 3.6e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF50410 - 7.6e-05 23.0 0.0 0.00012 22.4 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferases group 1 MFS_1 PF07690.16 ORF49873 - 5.2e-06 25.6 10.3 8.6e-06 24.9 10.3 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF49873 - 9.3e-06 24.8 14.1 3e-05 23.1 14.1 1.8 1 1 0 1 1 1 1 Sugar (and other) transporter Nuc_sug_transp PF04142.15 ORF47078 - 1.6e-07 30.8 1.0 1.7e-07 30.7 1.0 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF3935 PF13071.6 ORF47078 - 0.057 14.0 1.4 0.057 14.0 1.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3935) Proteasome PF00227.26 ORF46980 - 8.2e-44 149.4 0.0 9.2e-44 149.2 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit YEATS PF03366.16 ORF46956 - 0.00055 19.8 0.2 0.0013 18.6 0.2 1.6 1 0 0 1 1 1 1 YEATS family Pkinase PF00069.25 ORF46637 - 0.0019 17.6 0.0 0.0027 17.1 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Cyt-b5 PF00173.28 ORF45999 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF45999 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF45992 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF45992 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 FAM60A PF15396.6 ORF45777 - 0.067 13.2 6.9 0.084 12.9 6.9 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Cyt-b5 PF00173.28 ORF44082 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF44082 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 BPD_transp_1 PF00528.22 ORF43836 - 0.066 12.9 0.6 0.066 12.9 0.6 1.6 2 0 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component Se-cys_synth_N PF12390.8 ORF4320 - 0.051 13.8 0.8 1.9 8.8 0.1 2.9 2 0 0 2 2 2 0 Selenocysteine synthase N terminal Thioredoxin PF00085.20 ORF42898 - 5e-22 77.8 0.0 7.4e-22 77.3 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF42898 - 5.1e-09 36.5 0.0 2.7e-08 34.2 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF42898 - 6.3e-06 26.3 0.0 1.1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF42898 - 0.00017 21.3 0.1 0.067 12.9 0.0 2.1 1 1 1 2 2 2 2 Redoxin SAP PF02037.27 ORF42898 - 0.00021 20.9 0.5 3 7.7 0.0 3.9 4 0 0 4 4 4 1 SAP domain Thioredoxin_8 PF13905.6 ORF42898 - 0.0016 18.7 0.0 0.53 10.7 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF42898 - 0.0017 17.8 0.0 0.0019 17.6 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 ORF42898 - 0.0075 16.2 0.0 0.031 14.2 0.0 1.8 1 1 0 1 1 1 1 AhpC/TSA family HeH PF12949.7 ORF42898 - 0.022 14.4 0.1 3.4 7.5 0.0 2.4 2 0 0 2 2 2 0 HeH/LEM domain Thioredoxin_3 PF13192.6 ORF42898 - 0.023 14.7 0.1 0.076 13.1 0.0 1.8 2 0 0 2 2 2 0 Thioredoxin domain DUF4174 PF13778.6 ORF42898 - 0.031 14.7 0.0 0.081 13.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4174) Thioredoxin_5 PF13743.6 ORF42898 - 0.045 13.4 0.0 0.45 10.2 0.0 2.0 1 1 1 2 2 2 0 Thioredoxin Thioredoxin_9 PF14595.6 ORF42898 - 0.047 13.5 0.0 0.069 12.9 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin Thioredoxin_6 PF13848.6 ORF42898 - 0.048 13.6 0.0 0.075 12.9 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain Rrf2 PF02082.20 ORF41463 - 1.8e-27 95.5 0.0 3.1e-27 94.7 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 ORF41463 - 0.0058 16.5 0.0 0.01 15.7 0.0 1.4 1 0 0 1 1 1 1 MarR family HrcA_DNA-bdg PF03444.15 ORF41463 - 0.009 15.6 0.3 0.015 15.0 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_24 PF13412.6 ORF41463 - 0.018 14.6 0.0 0.033 13.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_47 PF16221.5 ORF41463 - 0.076 12.6 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 winged helix-turn-helix HTH_AraC PF00165.23 ORF41463 - 0.13 12.4 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family SET PF00856.28 ORF40717 - 1.3e-06 28.9 0.0 1.6e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 SET domain DUF5536 PF17688.1 ORF40717 - 0.026 14.4 1.4 2.2 8.2 0.2 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5536) CSD PF00313.22 ORF40589 - 6.7e-12 45.1 0.0 9.5e-12 44.6 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain zf-RanBP PF00641.18 ORF40589 - 0.0003 20.0 1.2 0.00051 19.3 1.2 1.4 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others OB_RNB PF08206.11 ORF40589 - 0.0017 18.0 1.8 0.0017 18.0 1.8 2.4 3 1 0 3 3 3 1 Ribonuclease B OB domain zf-ribbon_3 PF13248.6 ORF40589 - 0.002 17.5 3.0 0.0037 16.6 3.0 1.5 1 0 0 1 1 1 1 zinc-ribbon domain Rubredoxin PF00301.20 ORF40589 - 0.0026 17.8 1.7 0.008 16.2 0.2 2.2 2 0 0 2 2 2 1 Rubredoxin DZR PF12773.7 ORF40589 - 0.023 14.7 0.9 0.04 13.9 0.9 1.3 1 0 0 1 1 1 0 Double zinc ribbon Auto_anti-p27 PF06677.12 ORF40589 - 0.24 11.6 1.5 0.32 11.2 0.7 1.7 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_2 PF13240.6 ORF40589 - 1.3 8.8 7.1 3.1 7.6 4.9 2.5 2 1 0 2 2 2 0 zinc-ribbon domain PRP38_assoc PF12871.7 ORF40589 - 8.8 7.0 31.5 3.4 8.3 22.1 2.3 2 0 0 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Cyt-b5 PF00173.28 ORF39874 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF39874 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Nucleoporin2 PF04096.14 ORF39567 - 1.2e-23 83.8 0.5 1.6e-23 83.5 0.5 1.1 1 0 0 1 1 1 1 Nucleoporin autopeptidase CENP-N PF05238.13 ORF38369 - 0.022 14.1 1.2 0.025 13.9 1.2 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like TPR_19 PF14559.6 ORF38369 - 0.052 14.1 0.6 11 6.6 0.2 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat CrgA PF06781.12 ORF38369 - 0.13 12.3 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Cell division protein CrgA TPR_5 PF12688.7 ORF38369 - 0.13 12.5 0.1 0.29 11.4 0.1 1.7 1 1 0 1 1 1 0 Tetratrico peptide repeat TPR_12 PF13424.6 ORF38369 - 0.13 12.5 0.7 2.6 8.4 0.0 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Connexin PF00029.19 ORF38369 - 0.17 11.7 0.1 0.17 11.6 0.1 1.1 1 0 0 1 1 1 0 Connexin VIR_N PF15912.5 ORF38369 - 0.18 11.3 3.3 0.21 11.2 3.3 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal U79_P34 PF03064.16 ORF38369 - 0.35 10.2 6.2 0.38 10.1 6.2 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Vps39_1 PF10366.9 ORF38369 - 0.37 11.1 2.5 0.63 10.4 0.2 2.2 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 1 Cytomega_UL84 PF06284.11 ORF38369 - 0.8 8.1 4.3 0.92 7.9 4.3 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein UBN_AB PF14075.6 ORF38369 - 1.3 8.7 10.8 0.44 10.2 7.5 1.7 1 1 0 1 1 1 0 Ubinuclein conserved middle domain LRR_6 PF13516.6 ORF37866 - 1.3e-21 74.8 7.0 0.00062 19.6 0.0 5.7 6 0 0 6 6 6 5 Leucine Rich repeat LRR_1 PF00560.33 ORF37866 - 0.00062 20.0 0.7 4.8 8.1 0.2 4.0 4 0 0 4 4 4 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF37866 - 0.017 15.6 5.2 0.95 10.0 0.2 3.2 3 2 0 3 3 3 0 Leucine Rich repeats (2 copies) Cyt-b5 PF00173.28 ORF37562 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF37562 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF4811 PF16069.5 ORF37492 - 0.028 14.3 0.4 0.043 13.7 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) Cytochrome_CBB3 PF13442.6 ORF3711 - 6.5e-16 58.4 0.1 1.1e-15 57.7 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF3711 - 4.2e-07 31.0 0.6 4.9e-06 27.6 0.6 2.1 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF3711 - 8.2e-05 22.3 0.3 0.00031 20.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain FpoO PF10621.9 ORF3711 - 0.076 13.3 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO DUF2613 PF11021.8 ORF3711 - 1.7 8.8 8.2 0.34 11.1 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) DUF3242 PF11586.8 ORF37019 - 0.0015 18.3 0.9 0.0015 18.3 0.9 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3242) Ion_trans PF00520.31 ORF3601 - 0.021 14.1 0.4 0.032 13.4 0.4 1.2 1 0 0 1 1 1 0 Ion transport protein DUF4208 PF13907.6 ORF3601 - 0.081 13.4 2.5 0.45 11.0 2.2 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4208) Cyt-b5 PF00173.28 ORF35928 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF35928 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 PP2C PF00481.21 ORF35491 - 5.5e-26 91.7 0.0 6.2e-26 91.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PseudoU_synth_2 PF00849.22 ORF35383 - 2e-17 63.8 0.0 2.5e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase PTPLA PF04387.14 ORF34747 - 0.19 11.5 0.0 0.31 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA ADIP PF11559.8 ORF32380 - 0.00096 19.3 8.6 0.0015 18.7 8.4 1.5 1 1 0 1 1 1 1 Afadin- and alpha -actinin-Binding DASH_Spc34 PF08657.10 ORF32380 - 0.013 15.3 12.3 0.022 14.5 11.9 1.6 1 1 0 1 1 1 0 DASH complex subunit Spc34 Yuri_gagarin PF15934.5 ORF32380 - 0.044 13.6 12.1 0.056 13.3 12.1 1.1 1 0 0 1 1 1 0 Yuri gagarin KASH_CCD PF14662.6 ORF32380 - 0.081 12.7 17.3 0.1 12.4 15.9 1.7 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF1542 PF07564.11 ORF32380 - 0.15 12.2 3.6 0.27 11.4 3.1 1.8 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1542) Cnn_1N PF07989.11 ORF32380 - 1.1 9.4 13.5 0.094 12.9 3.8 2.8 1 1 2 3 3 3 0 Centrosomin N-terminal motif 1 Csm1_N PF18504.1 ORF32380 - 1.3 9.4 15.2 5.6 7.4 5.2 3.4 1 1 2 3 3 3 0 Csm1 N-terminal domain DUF4407 PF14362.6 ORF32380 - 1.7 8.0 8.1 3.2 7.0 2.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) bZIP_1 PF00170.21 ORF32380 - 3.1 7.9 12.6 6.4 7.0 1.9 3.2 2 1 1 3 3 3 0 bZIP transcription factor FlaC_arch PF05377.11 ORF32380 - 3.1 8.2 13.0 9.3 6.7 5.6 2.8 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Cyt-b5 PF00173.28 ORF32182 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF32182 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF2718 PF10918.8 ORF31832 - 1.9 9.0 7.4 0.27 11.8 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2718) LGFP PF08310.11 ORF31824 - 0.069 13.7 0.0 0.34 11.5 0.1 1.9 2 0 0 2 2 2 0 LGFP repeat Vps39_2 PF10367.9 ORF31753 - 0.13 12.7 0.2 0.24 11.8 0.2 1.4 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 Nuc_sug_transp PF04142.15 ORF3120 - 1.6e-07 30.8 1.0 1.7e-07 30.7 1.0 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF3935 PF13071.6 ORF3120 - 0.057 14.0 1.4 0.057 14.0 1.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3935) Thiolase_N PF00108.23 ORF3048 - 3.9e-42 144.4 0.8 4.4e-42 144.2 0.8 1.0 1 0 0 1 1 1 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.26 ORF3048 - 7.8e-05 22.4 1.4 9.1e-05 22.1 1.4 1.2 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain LRR_6 PF13516.6 ORF30221 - 1.3e-21 74.8 7.0 0.00062 19.6 0.0 5.7 6 0 0 6 6 6 5 Leucine Rich repeat LRR_1 PF00560.33 ORF30221 - 0.00062 20.0 0.7 4.8 8.1 0.2 4.0 4 0 0 4 4 4 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF30221 - 0.017 15.6 5.2 0.95 10.0 0.2 3.2 3 2 0 3 3 3 0 Leucine Rich repeats (2 copies) AFG1_ATPase PF03969.16 ORF30040 - 2.4e-14 53.0 0.0 3e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 AFG1-like ATPase AAA_22 PF13401.6 ORF30040 - 0.00022 21.5 0.0 0.0019 18.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 ORF30040 - 0.00068 20.1 0.0 0.0019 18.6 0.0 1.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Torsin PF06309.11 ORF30040 - 0.005 17.0 0.0 0.008 16.3 0.0 1.3 1 0 0 1 1 1 1 Torsin AAA_16 PF13191.6 ORF30040 - 0.0095 16.3 0.0 0.015 15.7 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain RNA_helicase PF00910.22 ORF30040 - 0.031 14.7 0.0 0.07 13.5 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 ORF30040 - 0.042 13.4 0.0 0.06 12.9 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 ORF30040 - 0.1 12.6 0.0 0.91 9.5 0.0 2.2 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) FIST_C PF10442.9 ORF29850 - 7e-10 39.0 0.0 8.1e-10 38.8 0.0 1.2 1 0 0 1 1 1 1 FIST C domain FAM60A PF15396.6 ORF29770 - 0.067 13.2 6.9 0.084 12.9 6.9 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Fer4_9 PF13187.6 ORF29569 - 1.8e-14 53.7 24.8 1.4e-08 34.7 9.8 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 ORF29569 - 4.8e-13 48.3 37.8 5.9e-07 29.0 1.7 5.7 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_11 PF13247.6 ORF29569 - 8.3e-13 48.3 11.3 8.3e-13 48.3 11.3 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF29569 - 1.3e-12 48.1 51.3 3.1e-06 27.7 10.6 3.2 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF29569 - 2.6e-11 43.4 40.0 3.4e-07 30.3 11.0 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF29569 - 4.8e-10 39.1 38.6 4.1e-05 23.5 2.6 4.5 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_2 PF12797.7 ORF29569 - 8.7e-09 35.0 36.9 7.4e-06 25.8 2.7 4.2 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.6 ORF29569 - 2.8e-08 34.6 29.1 0.008 17.1 2.0 4.7 3 1 2 5 5 5 4 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 ORF29569 - 2.3e-06 28.1 46.1 0.026 15.5 4.9 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 ORF29569 - 2.6e-05 24.6 27.0 0.0016 18.8 6.3 3.3 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF29569 - 4.7e-05 23.6 40.7 0.00016 21.9 4.3 4.9 4 2 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 ORF29569 - 8.9e-05 22.5 32.4 0.0043 17.1 12.6 4.1 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF29569 - 0.00035 21.1 26.1 0.024 15.2 2.2 4.3 2 1 3 5 5 5 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 ORF29569 - 0.11 13.1 2.6 0.11 13.1 2.6 4.3 4 2 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I GF_recep_IV PF14843.6 ORF29569 - 0.18 11.6 22.0 0.86 9.4 16.6 2.9 2 1 0 2 2 2 0 Growth factor receptor domain IV ETF_QO PF05187.13 ORF29569 - 1.1 9.4 12.0 1.5 9.0 0.6 2.7 2 1 0 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_20 PF14691.6 ORF29569 - 1.5 8.6 31.5 0.1 12.4 1.6 4.0 1 1 3 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Cytochrome_CBB3 PF13442.6 ORF29139 - 6.5e-16 58.4 0.1 1.1e-15 57.7 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF29139 - 4.2e-07 31.0 0.6 4.9e-06 27.6 0.6 2.1 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF29139 - 8.2e-05 22.3 0.3 0.00031 20.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain FpoO PF10621.9 ORF29139 - 0.076 13.3 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO DUF2613 PF11021.8 ORF29139 - 1.7 8.8 8.2 0.34 11.1 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) tRNA_anti-codon PF01336.25 ORF28182 - 0.1 12.6 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain ABC_tran PF00005.27 ORF27860 - 3.7e-16 59.9 0.0 5.5e-16 59.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF27860 - 7.4e-07 29.3 0.0 8.9e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF27860 - 0.00029 20.4 0.0 0.00036 20.0 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF27860 - 0.1 12.8 0.1 1.5 9.1 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit SopA PF13981.6 ORF24196 - 1.3e-20 74.2 0.3 1.3e-20 74.2 0.3 2.1 3 0 0 3 3 3 1 SopA-like central domain DUF692 PF05114.13 ORF24196 - 0.075 12.2 0.1 0.17 11.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF692) DUF2992 PF11208.8 ORF21582 - 0.054 13.7 10.7 0.075 13.3 10.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) PIEZO PF15917.5 ORF21582 - 0.14 11.6 6.1 0.18 11.3 6.1 1.1 1 0 0 1 1 1 0 Piezo Hid1 PF12722.7 ORF21582 - 0.3 9.1 5.6 0.37 8.9 5.6 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Neur_chan_memb PF02932.16 ORF21582 - 0.44 10.6 3.1 0.53 10.3 3.1 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3506 PF12014.8 ORF21582 - 0.83 9.7 4.9 3.8 7.5 4.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF3506) Presenilin PF01080.17 ORF21582 - 1.4 7.6 6.8 1.6 7.4 6.8 1.1 1 0 0 1 1 1 0 Presenilin ALMT PF11744.8 ORF21582 - 2.8 6.7 5.7 3.4 6.4 5.7 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Zip PF02535.22 ORF21582 - 5 6.2 12.0 8.1 5.6 12.0 1.3 1 1 0 1 1 1 0 ZIP Zinc transporter tRNA_anti-codon PF01336.25 ORF21558 - 0.1 12.6 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain BAH PF01426.18 ORF2152 - 4.8e-10 39.3 0.0 6.6e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 BAH domain DUF769 PF05590.11 ORF21196 - 0.15 11.5 0.1 0.26 10.7 0.1 1.3 1 0 0 1 1 1 0 Xylella fastidiosa protein of unknown function (DUF769) FixO PF02433.15 ORF21029 - 0.051 13.0 3.3 0.07 12.6 3.3 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO Cyt-b5 PF00173.28 ORF20913 - 1.2e-07 31.8 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF20913 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Ocular_alb PF02101.15 ORF19339 - 0.11 11.3 0.0 4.4 6.1 0.0 2.0 2 0 0 2 2 2 0 Ocular albinism type 1 protein TFIIF_alpha PF05793.12 ORF18492 - 0.95 8.0 29.5 1.1 7.8 29.5 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) GTP_EFTU_D3 PF03143.17 ORF18071 - 2.7e-14 53.4 0.0 1.1e-13 51.5 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF18071 - 0.086 13.2 0.0 0.21 12.0 0.0 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 2 Clenterotox PF03505.14 ORF17714 - 0.077 12.6 0.1 0.1 12.2 0.1 1.2 1 0 0 1 1 1 0 Clostridium enterotoxin Kelch_1 PF01344.25 ORF17601 - 1.1e-07 31.3 6.7 0.08 12.5 0.2 4.2 5 1 0 5 5 5 3 Kelch motif Kelch_6 PF13964.6 ORF17601 - 2.3e-07 30.9 0.9 0.049 13.9 0.0 3.9 4 0 0 4 4 4 2 Kelch motif Kelch_4 PF13418.6 ORF17601 - 0.00012 22.0 0.0 2.1 8.4 0.0 3.3 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF17601 - 0.0088 16.3 0.3 0.35 11.2 0.0 2.9 4 0 0 4 4 4 1 Galactose oxidase, central domain DUF287 PF03384.14 ORF17601 - 0.043 14.2 0.0 1.6 9.2 0.0 2.3 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 Kelch_2 PF07646.15 ORF17601 - 0.12 12.4 1.6 5 7.3 0.1 3.2 3 1 0 3 3 3 0 Kelch motif Kelch_5 PF13854.6 ORF17601 - 0.63 10.1 2.9 8.3 6.5 1.2 3.1 3 1 0 3 3 3 0 Kelch motif ApeC PF16977.5 ORF17353 - 2.3e-05 24.4 0.7 0.0069 16.3 0.2 2.1 1 1 1 2 2 2 2 C-terminal domain of apextrin DUF2043 PF09740.9 ORF17353 - 0.19 12.4 2.4 0.49 11.1 0.4 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2043) TMEM135_C_rich PF15982.5 ORF16787 - 0.00039 21.0 1.1 0.00039 21.0 1.1 1.6 1 1 1 2 2 2 1 N-terminal cysteine-rich region of Transmembrane protein 135 Tim17 PF02466.19 ORF16787 - 0.0014 19.0 0.0 0.0024 18.2 0.0 1.3 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family DUF2418 PF10332.9 ORF16787 - 0.42 11.2 3.8 1.7 9.2 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2418) WES_acyltransf PF03007.16 ORF16044 - 1.1e-09 38.4 0.0 1.5e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Cyt-b5 PF00173.28 ORF16034 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF16034 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 LRR_6 PF13516.6 ORF15957 - 1.3e-21 74.8 7.0 0.00062 19.6 0.0 5.7 6 0 0 6 6 6 5 Leucine Rich repeat LRR_1 PF00560.33 ORF15957 - 0.00062 20.0 0.7 4.8 8.1 0.2 4.0 4 0 0 4 4 4 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF15957 - 0.017 15.6 5.2 0.95 10.0 0.2 3.2 3 2 0 3 3 3 0 Leucine Rich repeats (2 copies) Nuc_sug_transp PF04142.15 ORF15641 - 2.7e-07 30.1 1.7 2.9e-07 30.0 1.7 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF2244 PF10003.9 ORF15641 - 0.076 12.7 0.3 0.39 10.4 0.0 2.1 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) PEMT PF04191.13 ORF15641 - 0.59 10.6 7.0 0.13 12.7 1.2 2.4 2 1 1 3 3 3 0 Phospholipid methyltransferase ADK PF00406.22 ORF14624 - 0.0034 17.5 0.2 0.0034 17.5 0.2 1.5 2 0 0 2 2 2 1 Adenylate kinase Trnau1ap PF17654.1 ORF14624 - 0.21 12.4 4.6 0.2 12.5 3.4 1.6 1 1 0 1 1 1 0 Selenocysteine tRNA 1 associated proteins PspB PF06667.12 ORF14624 - 1.8 8.7 4.4 3.7 7.7 0.1 2.6 2 1 0 2 2 2 0 Phage shock protein B tRNA_lig_CPD PF08302.11 ORF14456 - 0.018 14.5 3.2 0.018 14.5 3.2 1.6 2 0 0 2 2 2 0 Fungal tRNA ligase phosphodiesterase domain Herpes_DNAp_acc PF04929.12 ORF14456 - 1.3 7.9 12.2 1.6 7.6 12.2 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor AFG1_ATPase PF03969.16 ORF14192 - 2.4e-14 53.0 0.0 3e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 AFG1-like ATPase AAA_22 PF13401.6 ORF14192 - 0.00022 21.5 0.0 0.0019 18.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 ORF14192 - 0.00068 20.1 0.0 0.0019 18.6 0.0 1.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Torsin PF06309.11 ORF14192 - 0.005 17.0 0.0 0.008 16.3 0.0 1.3 1 0 0 1 1 1 1 Torsin AAA_16 PF13191.6 ORF14192 - 0.0095 16.3 0.0 0.015 15.7 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain RNA_helicase PF00910.22 ORF14192 - 0.031 14.7 0.0 0.07 13.5 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 ORF14192 - 0.042 13.4 0.0 0.06 12.9 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 ORF14192 - 0.1 12.6 0.0 0.91 9.5 0.0 2.2 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) MORN PF02493.20 ORF14077 - 2.2e-27 93.3 43.7 1.2e-07 31.2 0.5 6.1 6 0 0 6 6 6 6 MORN repeat TMEM135_C_rich PF15982.5 ORF13625 - 0.00039 21.0 1.1 0.00039 21.0 1.1 1.6 1 1 1 2 2 2 1 N-terminal cysteine-rich region of Transmembrane protein 135 Tim17 PF02466.19 ORF13625 - 0.0014 19.0 0.0 0.0024 18.2 0.0 1.3 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family DUF2418 PF10332.9 ORF13625 - 0.42 11.2 3.8 1.7 9.2 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2418) Cytochrome_CBB3 PF13442.6 ORF1332 - 6.5e-16 58.4 0.1 1.1e-15 57.7 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF1332 - 4.2e-07 31.0 0.6 4.9e-06 27.6 0.6 2.1 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF1332 - 8.2e-05 22.3 0.3 0.00031 20.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain FpoO PF10621.9 ORF1332 - 0.076 13.3 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO DUF2613 PF11021.8 ORF1332 - 1.7 8.8 8.2 0.34 11.1 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) Nuc_sug_transp PF04142.15 ORF13124 - 2.7e-07 30.1 1.7 2.9e-07 30.0 1.7 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF2244 PF10003.9 ORF13124 - 0.076 12.7 0.3 0.39 10.4 0.0 2.1 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) PEMT PF04191.13 ORF13124 - 0.59 10.6 7.0 0.13 12.7 1.2 2.4 2 1 1 3 3 3 0 Phospholipid methyltransferase C2 PF00168.30 ORF12395 - 0.00019 21.7 0.0 0.0004 20.6 0.0 1.5 2 0 0 2 2 2 1 C2 domain adh_short PF00106.25 ORF11868 - 7.2e-39 133.3 0.1 7.9e-39 133.1 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF11868 - 4.5e-28 98.4 0.0 5.4e-28 98.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF11868 - 2.3e-06 27.6 0.1 3.5e-06 27.0 0.1 1.3 1 1 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF11868 - 0.049 12.8 0.0 0.05 12.7 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein LEA_5 PF00477.17 ORF11868 - 0.12 12.8 0.1 0.18 12.3 0.1 1.2 1 0 0 1 1 1 0 Small hydrophilic plant seed protein Cyt-b5 PF00173.28 ORF11415 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF11415 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 HMGL-like PF00682.19 ORF111917 - 6.4e-27 94.8 0.1 7.2e-27 94.6 0.1 1.0 1 0 0 1 1 1 1 HMGL-like Cytochrome_CBB3 PF13442.6 ORF111084 - 6.5e-16 58.4 0.1 1.1e-15 57.7 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF111084 - 4.2e-07 31.0 0.6 4.9e-06 27.6 0.6 2.1 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF111084 - 8.2e-05 22.3 0.3 0.00031 20.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain FpoO PF10621.9 ORF111084 - 0.076 13.3 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO DUF2613 PF11021.8 ORF111084 - 1.7 8.8 8.2 0.34 11.1 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) MFS_5 PF05631.14 ORF110934 - 2.6e-49 168.1 3.2 3e-49 167.9 3.2 1.0 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM MFS_1 PF07690.16 ORF110934 - 3.1e-07 29.6 9.6 2.7e-06 26.6 9.6 1.9 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF110934 - 2.1e-05 23.6 0.9 2.1e-05 23.6 0.9 1.8 2 0 0 2 2 2 1 Sugar (and other) transporter Cyt-b5 PF00173.28 ORF110846 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF110846 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF110769 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Sugar_tr PF00083.24 ORF110733 - 4.4e-07 29.1 3.6 5.1e-07 28.9 3.6 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF110733 - 0.00013 21.0 6.2 0.00015 20.8 6.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF110733 - 0.0023 16.6 1.5 0.0023 16.6 1.5 1.5 1 1 0 1 1 1 1 MFS/sugar transport protein Acetyltransf_1 PF00583.25 ORF109302 - 9.7e-17 61.3 0.0 1.2e-16 61.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF109302 - 1.4e-11 44.4 0.0 1.7e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF109302 - 2e-11 44.3 0.0 2.3e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF109302 - 2.1e-10 41.4 0.0 2.6e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF109302 - 4.7e-09 36.6 0.0 6.3e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF109302 - 1.8e-06 27.7 0.0 2.7e-06 27.1 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF109302 - 8.1e-06 25.7 0.0 1.3e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF109302 - 0.01 15.9 0.0 0.047 13.8 0.0 2.1 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain CENP-N PF05238.13 ORF109054 - 0.022 14.1 1.2 0.025 13.9 1.2 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like TPR_19 PF14559.6 ORF109054 - 0.052 14.1 0.6 11 6.6 0.2 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat CrgA PF06781.12 ORF109054 - 0.13 12.3 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Cell division protein CrgA TPR_5 PF12688.7 ORF109054 - 0.13 12.5 0.1 0.29 11.4 0.1 1.7 1 1 0 1 1 1 0 Tetratrico peptide repeat TPR_12 PF13424.6 ORF109054 - 0.13 12.5 0.7 2.6 8.4 0.0 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Connexin PF00029.19 ORF109054 - 0.17 11.7 0.1 0.17 11.6 0.1 1.1 1 0 0 1 1 1 0 Connexin VIR_N PF15912.5 ORF109054 - 0.18 11.3 3.3 0.21 11.2 3.3 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal U79_P34 PF03064.16 ORF109054 - 0.35 10.2 6.2 0.38 10.1 6.2 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Vps39_1 PF10366.9 ORF109054 - 0.37 11.1 2.5 0.63 10.4 0.2 2.2 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 1 Cytomega_UL84 PF06284.11 ORF109054 - 0.8 8.1 4.3 0.92 7.9 4.3 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein UBN_AB PF14075.6 ORF109054 - 1.3 8.7 10.8 0.44 10.2 7.5 1.7 1 1 0 1 1 1 0 Ubinuclein conserved middle domain Ald_Xan_dh_C PF01315.22 ORF108665 - 0.055 13.8 0.2 0.12 12.7 0.0 1.7 2 0 0 2 2 2 0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain UQ_con PF00179.26 ORF108661 - 3.5e-48 162.8 0.0 3.9e-48 162.6 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF108661 - 0.15 12.3 1.1 0.29 11.5 0.8 1.8 1 1 1 2 2 2 0 RWD domain Cyt-b5 PF00173.28 ORF108342 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF108342 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF3741 PF12552.8 ORF108134 - 0.028 14.4 2.4 0.15 12.1 0.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3741) DUF2203 PF09969.9 ORF108134 - 0.041 14.6 1.3 0.075 13.8 1.2 1.7 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Cyt-b5 PF00173.28 ORF107971 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF107971 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF2593 PF10767.9 ORF107458 - 2.7e-64 215.5 6.5 3.1e-64 215.3 6.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2593) DUF4128 PF13554.6 ORF106854 - 0.1 12.7 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage related domain of unknown function Cyt-b5 PF00173.28 ORF106015 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF106015 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF104233 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF104233 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF103504 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF103504 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Nuc_sug_transp PF04142.15 ORF103151 - 2.7e-07 30.1 1.7 2.9e-07 30.0 1.7 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF2244 PF10003.9 ORF103151 - 0.076 12.7 0.3 0.39 10.4 0.0 2.1 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) PEMT PF04191.13 ORF103151 - 0.59 10.6 7.0 0.13 12.7 1.2 2.4 2 1 1 3 3 3 0 Phospholipid methyltransferase FAM60A PF15396.6 ORF103006 - 0.067 13.2 6.9 0.084 12.9 6.9 1.2 1 0 0 1 1 1 0 Protein Family FAM60A GILT PF03227.16 ORF102606 - 4.4e-07 30.1 7.3 7.1e-07 29.4 7.3 1.4 1 0 0 1 1 1 1 Gamma interferon inducible lysosomal thiol reductase (GILT) zf-UBR PF02207.20 ORF102005 - 0.26 11.5 4.3 0.89 9.8 2.5 2.2 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Cyt-b5 PF00173.28 ORF101664 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF101664 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF101336 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF101336 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cytochrome_CBB3 PF13442.6 ORF101080 - 6.5e-16 58.4 0.1 1.1e-15 57.7 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF101080 - 4.2e-07 31.0 0.6 4.9e-06 27.6 0.6 2.1 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF101080 - 8.2e-05 22.3 0.3 0.00031 20.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain FpoO PF10621.9 ORF101080 - 0.076 13.3 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO DUF2613 PF11021.8 ORF101080 - 1.7 8.8 8.2 0.34 11.1 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) Cyt-b5 PF00173.28 ORF100100 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF100100 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Mannitol_dh PF01232.23 NODE_42255_length_481_cov_2.665919_g34651_i0forward_frame_1 - 2.6e-07 30.9 0.2 3.9e-07 30.3 0.2 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain Vut_1 PF02592.15 NODE_42241_length_481_cov_61.078475_g34637_i0reverse_frame_1 - 1.4e-18 67.7 14.8 2.2e-18 67.0 14.8 1.4 1 1 0 1 1 1 1 Putative vitamin uptake transporter LAGLIDADG_1 PF00961.19 NODE_42226_length_481_cov_149.417040_g34622_i0reverse_frame_1 - 0.31 12.0 3.3 0.15 13.0 1.0 1.6 2 0 0 2 2 2 0 LAGLIDADG endonuclease Tuberculin PF12198.8 NODE_42224_length_481_cov_158.659193_g34621_i0forward_frame_1 - 1.8 8.7 4.9 6.1 7.0 0.1 3.5 4 0 0 4 4 4 0 Theoretical tuberculin protein SLATT_fungal PF18142.1 NODE_42224_length_481_cov_158.659193_g34621_i0forward_frame_1 - 6.4 6.8 6.1 7.3 6.6 0.2 2.5 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain FAM70 PF14967.6 NODE_42206_length_481_cov_852.255605_g34603_i0reverse_frame_1 - 0.14 11.6 2.8 0.17 11.3 2.8 1.1 1 0 0 1 1 1 0 FAM70 protein VirE1 PF12189.8 NODE_42206_length_481_cov_852.255605_g34603_i0reverse_frame_1 - 0.15 12.2 0.4 0.47 10.6 0.1 1.9 2 0 0 2 2 2 0 Single-strand DNA-binding protein Asp PF00026.23 NODE_42206_length_481_cov_852.255605_g34603_i0forward_frame_1 - 1.2e-07 31.5 0.0 1.3e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF4751 PF15942.5 NODE_42206_length_481_cov_852.255605_g34603_i0forward_frame_1 - 0.046 13.7 0.5 0.21 11.6 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4751) PINIT PF14324.6 NODE_42191_length_482_cov_2.861298_g34591_i0reverse_frame_1 - 0.01 16.2 0.4 0.013 15.8 0.4 1.2 1 0 0 1 1 1 0 PINIT domain Y_phosphatase PF00102.27 NODE_42182_length_482_cov_63.803132_g34582_i0forward_frame_1 - 3.1e-06 26.9 0.2 4.4e-06 26.4 0.2 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Keratin_B2 PF01500.17 NODE_42177_length_482_cov_88.709172_g34577_i0reverse_frame_1 - 0.035 14.1 1.2 0.035 14.1 1.2 2.1 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein DUF2423 PF10338.9 NODE_42174_length_482_cov_94.601790_g34574_i0reverse_frame_1 - 0.0076 16.5 0.7 0.022 15.0 0.7 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2423) EF-hand_5 PF13202.6 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 1.7e-12 46.2 0.4 7.5e-06 25.2 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 9.1e-12 43.6 0.1 6.5e-05 22.2 0.1 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 4.3e-11 43.1 0.0 7e-11 42.4 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 2.1e-09 36.5 0.0 0.00038 20.2 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 5.1e-06 26.2 0.2 0.0069 16.2 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain pair Fer4_24 PF18109.1 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 0.031 14.5 0.2 0.064 13.5 0.2 1.5 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain SPARC_Ca_bdg PF10591.9 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 0.055 13.8 0.0 0.21 11.9 0.0 1.8 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Ammonium_transp PF00909.21 NODE_42158_length_482_cov_3147.176734_g34559_i0reverse_frame_1 - 5.9e-07 28.5 0.0 7.5e-07 28.2 0.0 1.2 1 0 0 1 1 1 1 Ammonium Transporter Family Apocytochr_F_C PF01333.19 NODE_42157_length_482_cov_3216.644295_g34558_i0reverse_frame_1 - 1.9e-35 121.5 0.1 2.3e-35 121.2 0.1 1.1 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF5006 PF16397.5 NODE_42157_length_482_cov_3216.644295_g34558_i0reverse_frame_1 - 0.00026 20.3 0.1 0.00033 19.9 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5006) RnfC_N PF13375.6 NODE_42157_length_482_cov_3216.644295_g34558_i0reverse_frame_1 - 0.058 13.4 0.3 2.4 8.1 0.1 2.2 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain YajC PF02699.15 NODE_42155_length_482_cov_13470.089485_g34556_i0forward_frame_1 - 0.36 10.7 2.0 0.69 9.8 2.0 1.4 1 0 0 1 1 1 0 Preprotein translocase subunit DUF4046 PF13255.6 NODE_42133_length_483_cov_65.959821_g34534_i0forward_frame_1 - 0.19 12.3 2.1 0.41 11.2 0.3 2.2 1 1 2 3 3 3 0 Protein of unknown function (DUF4046) Apolipoprotein PF01442.18 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 3.4e-07 30.3 2.4 6.4e-07 29.4 2.4 1.4 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain ApoLp-III PF07464.11 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.0001 22.5 4.9 0.13 12.4 2.2 2.6 1 1 1 2 2 2 2 Apolipophorin-III precursor (apoLp-III) Exonuc_VII_L PF02601.15 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.0052 16.4 1.7 0.0069 16.0 1.7 1.3 1 0 0 1 1 1 1 Exonuclease VII, large subunit Baculo_PEP_C PF04513.12 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.0056 16.7 0.0 1.1 9.3 0.0 2.4 1 1 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus WXG100 PF06013.12 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.012 15.9 2.3 0.51 10.6 0.4 3.1 1 1 1 2 2 2 0 Proteins of 100 residues with WXG Fzo_mitofusin PF04799.13 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.018 14.6 3.2 0.41 10.2 0.0 2.1 1 1 1 2 2 2 0 fzo-like conserved region Fib_alpha PF08702.10 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.019 15.1 3.1 0.077 13.2 2.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.024 13.5 3.1 0.027 13.4 3.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF5344 PF17279.2 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.033 14.7 1.4 9.6 6.9 0.1 2.5 2 1 0 2 2 2 0 Family of unknown function (DUF5344) Syntaxin-6_N PF09177.11 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.035 14.7 3.6 0.42 11.2 3.6 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal GldM_N PF12081.8 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.045 13.9 2.2 5.9 6.9 0.5 2.0 1 1 1 2 2 2 0 GldM N-terminal domain DUF948 PF06103.11 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.045 14.0 0.3 5.7 7.3 0.0 2.8 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Herpes_UL14 PF03580.14 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.059 13.6 2.2 5.5 7.2 1.7 2.2 1 1 1 2 2 2 0 Herpesvirus UL14-like protein KxDL PF10241.9 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.066 13.5 4.9 3 8.2 0.1 3.1 2 1 1 3 3 3 0 Uncharacterized conserved protein TSNR_N PF04705.12 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.069 13.2 0.1 0.24 11.5 0.0 1.8 2 0 0 2 2 2 0 Thiostrepton-resistance methylase, N terminus YtxH PF12732.7 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.082 13.5 4.0 11 6.6 4.0 2.6 1 1 0 1 1 1 0 YtxH-like protein DUF1451 PF07295.11 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.087 12.9 3.3 0.22 11.5 0.4 2.4 2 1 1 3 3 3 0 Zinc-ribbon containing domain YkyA PF10368.9 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.11 12.1 4.8 1.5 8.5 0.1 2.3 1 1 0 2 2 2 0 Putative cell-wall binding lipoprotein ApoO PF09769.9 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.16 12.0 0.2 0.79 9.7 0.2 2.2 1 1 0 1 1 1 0 Apolipoprotein O Prominin PF05478.11 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.2 9.6 1.1 0.29 9.1 1.1 1.3 1 1 0 1 1 1 0 Prominin DUF4854 PF16146.5 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.23 11.8 3.0 1.8 8.9 0.5 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4854) Lectin_N PF03954.14 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 0.41 10.4 3.4 0.25 11.1 1.2 1.7 2 1 0 2 2 2 0 Hepatic lectin, N-terminal domain HIP1_clath_bdg PF16515.5 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_1 - 1 10.0 8.4 2.7 8.7 2.2 2.4 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 RCC1_2 PF13540.6 NODE_42119_length_483_cov_104.857143_g34521_i0reverse_frame_1 - 0.00018 21.2 7.6 0.51 10.2 0.2 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat CP12 PF02672.15 NODE_42119_length_483_cov_104.857143_g34521_i0reverse_frame_1 - 0.026 15.3 2.8 61 4.5 0.1 3.9 4 0 0 4 4 4 0 CP12 domain Spectrin PF00435.21 NODE_42119_length_483_cov_104.857143_g34521_i0reverse_frame_1 - 0.031 14.8 0.0 13 6.4 0.0 3.4 4 0 0 4 4 4 0 Spectrin repeat DUF4687 PF15747.5 NODE_42119_length_483_cov_104.857143_g34521_i0reverse_frame_1 - 0.35 11.3 2.2 1.2 9.6 0.5 2.4 1 1 2 3 3 3 0 Domain of unknown function (DUF4687) AFP_2 PF18815.1 NODE_42119_length_483_cov_104.857143_g34521_i0reverse_frame_1 - 1.3 9.4 4.3 13 6.1 0.2 3.3 3 2 0 3 3 3 0 Bacterial antifreeze protein repeat PheRS_DBD2 PF18554.1 NODE_42119_length_483_cov_104.857143_g34521_i0reverse_frame_1 - 6.1 6.9 16.7 5.3 7.1 1.9 3.9 4 0 0 4 4 4 0 PheRS DNA binding domain 2 YIF1 PF03878.15 NODE_42115_length_483_cov_133.189732_g34517_i0forward_frame_1 - 3.6e-15 56.1 5.2 4.3e-15 55.9 5.2 1.0 1 0 0 1 1 1 1 YIF1 Yip1 PF04893.17 NODE_42115_length_483_cov_133.189732_g34517_i0forward_frame_1 - 0.0087 15.8 9.7 0.0087 15.8 9.7 1.6 1 1 1 2 2 2 1 Yip1 domain DUF1754 PF08555.10 NODE_42084_length_483_cov_1175.515625_g34486_i0forward_frame_1 - 0.023 15.5 5.3 0.045 14.5 5.3 1.4 1 0 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) Glyco_transf_8C PF08437.10 NODE_42073_length_484_cov_2.532294_g34477_i0reverse_frame_3 - 1.7e-18 66.5 4.7 3e-18 65.7 4.7 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 8 C-terminal Glyco_transf_8 PF01501.20 NODE_42073_length_484_cov_2.532294_g34477_i0reverse_frame_3 - 8e-06 25.6 0.3 8e-06 25.6 0.3 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 8 Glycos_transf_2 PF00535.26 NODE_42073_length_484_cov_2.532294_g34477_i0reverse_frame_3 - 5.9e-05 22.9 0.4 0.00014 21.7 0.1 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 NODE_42073_length_484_cov_2.532294_g34477_i0reverse_frame_3 - 0.16 11.8 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 53-BP1_Tudor PF09038.10 NODE_42073_length_484_cov_2.532294_g34477_i0reverse_frame_2 - 0.063 13.2 0.0 0.088 12.8 0.0 1.2 1 0 0 1 1 1 0 Tumour suppressor p53-binding protein-1 Tudor Shisa PF13908.6 NODE_42073_length_484_cov_2.532294_g34477_i0forward_frame_2 - 0.076 13.2 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator UQ_con PF00179.26 NODE_42072_length_484_cov_2.543430_g34476_i0reverse_frame_2 - 6e-08 32.4 0.5 9.3e-08 31.8 0.5 1.5 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme KNOX1 PF03790.13 NODE_42072_length_484_cov_2.543430_g34476_i0forward_frame_3 - 0.069 12.9 3.7 0.58 9.9 0.6 2.6 3 0 0 3 3 3 0 KNOX1 domain Melibiase_2 PF16499.5 NODE_42068_length_484_cov_3.095768_g34472_i0reverse_frame_3 - 0.069 12.3 0.5 0.096 11.8 0.5 1.2 1 0 0 1 1 1 0 Alpha galactosidase A # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks134.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks134.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks134.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks134.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:48:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-RING_2 PF13639.6 NODE_42055_length_484_cov_72.723831_g34459_i0reverse_frame_2 - 0.54 10.6 4.5 8.2 6.9 3.7 2.3 2 0 0 2 2 2 0 Ring finger domain Yos9_DD PF17880.1 NODE_42054_length_484_cov_73.654788_g34458_i0forward_frame_3 - 0.0035 17.5 0.1 0.0054 16.8 0.1 1.2 1 0 0 1 1 1 1 Yos9 dimerzation domain CH_2 PF06294.11 NODE_42054_length_484_cov_73.654788_g34458_i0forward_frame_2 - 0.047 13.8 0.0 0.098 12.8 0.0 1.6 1 1 0 1 1 1 0 CH-like domain in sperm protein Cadherin_tail PF15974.5 NODE_42053_length_484_cov_75.654788_g34457_i0reverse_frame_3 - 0.025 14.9 0.3 0.038 14.3 0.3 1.3 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region U-box PF04564.15 NODE_42041_length_484_cov_146.334076_g34445_i0reverse_frame_3 - 5.5e-15 55.3 0.0 1.1e-14 54.3 0.0 1.4 1 0 0 1 1 1 1 U-box domain UCR_14kD PF02271.16 NODE_42041_length_484_cov_146.334076_g34445_i0reverse_frame_3 - 0.0038 17.2 0.0 0.0067 16.4 0.0 1.4 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit zf-NOSIP PF15906.5 NODE_42041_length_484_cov_146.334076_g34445_i0reverse_frame_3 - 0.14 12.3 0.0 0.32 11.1 0.0 1.6 2 0 0 2 2 2 0 Zinc-finger of nitric oxide synthase-interacting protein ChaC PF04752.12 NODE_42035_length_484_cov_228.334076_g34439_i0reverse_frame_2 - 0.23 11.5 0.2 0.27 11.3 0.2 1.1 1 0 0 1 1 1 0 ChaC-like protein ADP_ribosyl_GH PF03747.14 NODE_42035_length_484_cov_228.334076_g34439_i0forward_frame_3 - 0.041 13.6 0.8 0.041 13.6 0.8 1.1 1 0 0 1 1 1 0 ADP-ribosylglycohydrolase DUF3267 PF11667.8 NODE_42034_length_484_cov_237.572383_g34438_i0forward_frame_2 - 0.078 13.3 6.0 1.6 9.1 1.3 2.6 1 1 1 2 2 2 0 Putative zincin peptidase tRNA_lig_CPD PF08302.11 NODE_42033_length_484_cov_238.601336_g34437_i0forward_frame_3 - 0.0013 18.2 0.3 0.0019 17.7 0.0 1.4 2 0 0 2 2 2 1 Fungal tRNA ligase phosphodiesterase domain MMR1 PF08505.10 NODE_42027_length_484_cov_788.982183_g34431_i0reverse_frame_2 - 7.6 6.7 29.5 10 6.3 29.5 1.2 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein CHDCT2 PF08074.11 NODE_42017_length_485_cov_2.155556_g34423_i0reverse_frame_2 - 0.059 13.5 1.4 0.16 12.1 0.2 1.9 2 0 0 2 2 2 0 CHDCT2 (NUC038) domain SBDS_C PF09377.10 NODE_42017_length_485_cov_2.155556_g34423_i0reverse_frame_2 - 0.16 12.0 1.1 0.2 11.6 1.1 1.3 1 1 0 1 1 1 0 SBDS protein C-terminal domain DUF4200 PF13863.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 9.5e-16 58.3 23.8 9.5e-16 58.3 23.8 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4200) V_ATPase_I PF01496.19 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.065 11.1 10.2 0.068 11.1 10.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cob_adeno_trans PF01923.18 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.14 12.3 3.6 0.21 11.7 3.6 1.3 1 0 0 1 1 1 0 Cobalamin adenosyltransferase ADIP PF11559.8 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.15 12.2 19.6 0.16 12.0 16.5 2.4 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DUF724 PF05266.14 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.16 11.8 13.9 0.25 11.2 13.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF4140 PF13600.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.27 11.7 4.1 0.51 10.8 4.1 1.6 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF4094 PF13334.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.34 11.3 6.5 0.51 10.8 6.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) DUF4407 PF14362.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.44 9.8 4.3 0.47 9.8 4.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PET10 PF17316.2 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.48 9.9 8.8 0.59 9.6 8.8 1.1 1 0 0 1 1 1 0 Petite colonies protein 10 DUF1664 PF07889.12 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.61 10.1 6.3 0.76 9.8 4.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) HAUS6_N PF14661.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 1 8.9 15.2 2.2 7.8 15.2 1.7 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus APG6_N PF17675.1 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 1.4 9.5 21.4 0.68 10.5 18.9 1.8 1 1 1 2 2 2 0 Apg6 coiled-coil region WDCP PF15390.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 1.5 7.1 7.5 1.7 7.0 7.5 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Ly49 PF08391.10 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 2.4 8.6 12.9 5.1 7.5 12.2 2.0 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region TMPIT PF07851.13 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 4.6 6.4 11.7 5.5 6.1 11.7 1.2 1 0 0 1 1 1 0 TMPIT-like protein CorA PF01544.18 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 4.6 6.5 8.4 3.8 6.8 7.0 1.4 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF2778 PF10908.8 NODE_42006_length_485_cov_10.044444_g34413_i0forward_frame_3 - 0.075 13.3 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2778) Topo_Zn_Ribbon PF08272.11 NODE_41999_length_485_cov_77.131111_g34406_i0reverse_frame_2 - 0.018 14.7 0.1 0.04 13.6 0.1 1.6 1 0 0 1 1 1 0 Topoisomerase I zinc-ribbon-like Methyltransf_23 PF13489.6 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 3.8e-11 43.1 0.0 6.4e-11 42.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 1e-10 42.2 0.0 1.6e-10 41.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 9.6e-10 38.4 0.0 3e-09 36.8 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 1.2e-09 38.8 0.0 5.3e-09 36.7 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 4e-08 33.8 0.0 7.7e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.006 16.0 0.0 0.018 14.5 0.0 1.7 1 1 1 2 2 2 1 Tellurite resistance protein TehB MTS PF05175.14 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.022 14.3 0.0 0.034 13.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_32 PF13679.6 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.025 14.6 0.0 0.038 14.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.18 11.2 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.2 10.9 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase EVC2_like PF12297.8 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.27 9.9 0.1 0.36 9.5 0.1 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Erf4 PF10256.9 NODE_41981_length_485_cov_284.662222_g34388_i0forward_frame_2 - 5.8e-05 23.2 0.0 7.8e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family Cyt_bd_oxida_I PF01654.17 NODE_41981_length_485_cov_284.662222_g34388_i0forward_frame_2 - 0.24 10.0 0.0 0.27 9.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit I Lactamase_B_2 PF12706.7 NODE_41977_length_485_cov_620.737778_g34384_i0reverse_frame_3 - 1.4e-10 41.0 0.0 1.8e-10 40.7 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 NODE_41977_length_485_cov_620.737778_g34384_i0reverse_frame_3 - 2.1e-10 40.8 0.0 2.6e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Tctex-1 PF03645.13 NODE_41972_length_485_cov_3532.711111_g34058_i2reverse_frame_3 - 1.2e-21 76.9 2.0 1.8e-21 76.3 2.0 1.3 1 0 0 1 1 1 1 Tctex-1 family Tctex-1 PF03645.13 NODE_41971_length_485_cov_3532.742222_g34058_i1forward_frame_3 - 1.2e-21 76.8 2.0 1.8e-21 76.3 2.0 1.3 1 0 0 1 1 1 1 Tctex-1 family PagP PF07017.11 NODE_41964_length_486_cov_1.933481_g34375_i0reverse_frame_2 - 6.9e-28 96.9 1.0 9.5e-28 96.4 1.0 1.2 1 0 0 1 1 1 1 Antimicrobial peptide resistance and lipid A acylation protein PagP zf-C2H2_jaz PF12171.8 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.00075 19.7 2.6 0.0014 18.8 2.6 1.4 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.0018 18.6 2.0 0.0018 18.6 2.0 1.7 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.0078 16.5 0.2 0.01 16.1 0.2 1.1 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.056 14.3 3.3 0.11 13.4 3.3 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger DUF629 PF04780.12 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.093 11.2 1.1 0.12 10.9 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF629) PKS_DE PF18369.1 NODE_41963_length_486_cov_2.192905_g34374_i0forward_frame_2 - 0.041 14.4 0.4 0.1 13.1 0.4 1.8 1 0 0 1 1 1 0 Polyketide synthase dimerisation element domain DbpA PF03880.15 NODE_41958_length_486_cov_3.161863_g34369_i0reverse_frame_3 - 0.013 15.5 0.0 0.021 14.8 0.0 1.4 1 0 0 1 1 1 0 DbpA RNA binding domain SLATT_5 PF18160.1 NODE_41955_length_486_cov_3.560976_g34366_i0forward_frame_2 - 3.2 7.1 10.3 0.56 9.5 6.5 1.6 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 MFS_1 PF07690.16 NODE_41954_length_486_cov_5.662971_g34365_i0forward_frame_2 - 5.5e-12 45.3 5.0 6.1e-12 45.1 5.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily ATG22 PF11700.8 NODE_41954_length_486_cov_5.662971_g34365_i0forward_frame_2 - 3.8e-07 29.1 2.2 5.8e-07 28.5 2.2 1.3 1 0 0 1 1 1 1 Vacuole effluxer Atg22 like MFS_1_like PF12832.7 NODE_41954_length_486_cov_5.662971_g34365_i0forward_frame_2 - 0.00041 19.3 1.4 0.00041 19.3 1.4 1.8 1 1 1 2 2 2 1 MFS_1 like family MFS_2 PF13347.6 NODE_41954_length_486_cov_5.662971_g34365_i0forward_frame_2 - 0.0048 15.5 4.6 0.0056 15.3 4.6 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Folliculin PF11704.8 NODE_41946_length_486_cov_64.858093_g34357_i0reverse_frame_3 - 0.018 15.0 1.3 0.021 14.7 1.3 1.1 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport C6_DPF PF10170.9 NODE_41919_length_486_cov_2756.166297_g11687_i2reverse_frame_2 - 0.013 15.9 3.8 0.023 15.1 3.8 1.4 1 0 0 1 1 1 0 Cysteine-rich domain Carb_anhydrase PF00194.21 NODE_41919_length_486_cov_2756.166297_g11687_i2forward_frame_2 - 1e-10 41.6 0.0 1.3e-10 41.3 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMIE PF16038.5 NODE_41919_length_486_cov_2756.166297_g11687_i2forward_frame_2 - 0.01 15.7 0.2 0.021 14.6 0.2 1.5 1 0 0 1 1 1 0 TMIE protein OppC_N PF12911.7 NODE_41917_length_486_cov_8378.057650_g34332_i0forward_frame_3 - 0.24 11.4 0.1 0.24 11.4 0.1 1.8 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C KH_1 PF00013.29 ORF99941 - 1e-09 38.1 0.0 2.2e-09 37.0 0.0 1.6 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF99941 - 0.0067 16.2 0.0 0.015 15.1 0.0 1.6 1 0 0 1 1 1 1 KH domain PTPRCAP PF15713.5 ORF99941 - 0.0075 16.6 15.7 0.0087 16.4 15.7 1.2 1 0 0 1 1 1 1 Protein tyrosine phosphatase receptor type C-associated SID-1_RNA_chan PF13965.6 ORF99941 - 0.046 12.1 0.3 0.052 12.0 0.3 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF4820 PF16091.5 ORF99941 - 0.079 12.3 5.8 0.093 12.1 5.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) MAP17 PF15807.5 ORF99941 - 0.083 13.1 3.5 0.13 12.5 3.5 1.3 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 CobT PF06213.12 ORF99941 - 0.09 12.2 16.6 0.12 11.7 16.6 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT DUF2052 PF09747.9 ORF99941 - 0.11 12.6 16.7 0.14 12.3 16.7 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Connexin PF00029.19 ORF99941 - 0.22 11.3 2.3 0.28 10.9 2.3 1.3 1 0 0 1 1 1 0 Connexin RR_TM4-6 PF06459.12 ORF99941 - 0.22 11.3 10.2 0.25 11.1 10.2 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 O-antigen_lig PF13425.6 ORF99941 - 0.36 9.6 1.4 0.42 9.4 1.4 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein CLN3 PF02487.17 ORF99941 - 0.71 8.8 1.7 0.85 8.6 1.7 1.1 1 0 0 1 1 1 0 CLN3 protein DNA_pol_phi PF04931.13 ORF99941 - 0.77 7.8 21.0 0.93 7.5 21.0 1.1 1 0 0 1 1 1 0 DNA polymerase phi Serinc PF03348.15 ORF99941 - 0.83 8.5 2.6 1 8.2 2.6 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) Mem_trans PF03547.18 ORF99941 - 1.1 7.5 2.0 1.4 7.3 2.0 1.1 1 0 0 1 1 1 0 Membrane transport protein Presenilin PF01080.17 ORF99941 - 1.4 7.6 8.8 1.6 7.4 8.8 1.1 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 ORF99941 - 3 7.0 3.9 3.2 6.9 3.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter V_ATPase_I PF01496.19 ORF99941 - 3.6 5.4 6.4 4 5.2 6.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Paf1 PF03985.13 ORF99941 - 5.5 5.9 19.8 7.4 5.4 19.8 1.1 1 0 0 1 1 1 0 Paf1 Hid1 PF12722.7 ORF99941 - 6.6 4.7 8.1 7.2 4.6 8.1 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Pkinase PF00069.25 ORF97119 - 2.5e-23 82.8 0.0 5.9e-23 81.6 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF97119 - 4e-07 29.6 0.0 8.2e-07 28.6 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF97119 - 0.014 14.8 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 Kinase-like cNMP_binding PF00027.29 ORF96323 - 2.4e-05 24.3 0.1 3.6e-05 23.7 0.1 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain TctB PF07331.11 ORF95324 - 0.0078 16.5 5.3 0.014 15.6 5.3 1.4 1 1 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family Ost4 PF10215.9 ORF95324 - 0.04 13.8 0.5 0.28 11.0 0.1 2.4 2 0 0 2 2 2 0 Oligosaccaryltransferase Na_Ca_ex PF01699.24 ORF95324 - 0.15 12.0 5.6 0.73 9.8 2.1 2.2 2 0 0 2 2 2 0 Sodium/calcium exchanger protein YEATS PF03366.16 ORF94899 - 2.3e-21 75.6 1.0 2.8e-21 75.3 0.2 1.6 2 0 0 2 2 2 1 YEATS family Mrx7 PF10906.8 ORF94899 - 0.023 14.9 0.6 0.038 14.2 0.1 1.7 2 0 0 2 2 2 0 MIOREX complex component 7 ubiquitin PF00240.23 ORF94863 - 4.1e-18 64.9 1.5 3e-08 33.3 0.0 2.9 2 1 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF94863 - 1.9e-10 40.4 3.0 7.9e-05 22.4 0.2 2.2 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF94863 - 0.0018 18.3 1.7 0.4 10.8 0.0 3.6 2 2 1 3 3 3 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 ORF94863 - 0.031 14.7 0.3 2.5 8.6 0.0 2.7 1 1 1 2 2 2 0 Ubiquitin-like domain TUG-UBL1 PF11470.8 ORF94863 - 0.089 13.0 0.0 0.66 10.2 0.0 2.1 2 0 0 2 2 2 0 TUG ubiquitin-like domain Kelch_6 PF13964.6 ORF94358 - 1.5e-12 47.3 0.1 2.3e-06 27.7 0.0 3.1 2 1 1 3 3 3 2 Kelch motif Kelch_4 PF13418.6 ORF94358 - 7.2e-12 45.1 0.0 3.2e-06 27.0 0.0 3.2 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF94358 - 3.8e-11 42.4 1.0 7e-07 28.7 0.0 3.7 3 1 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 ORF94358 - 4.4e-07 29.6 0.0 0.0068 16.4 0.0 3.3 3 0 0 3 3 3 1 Kelch motif Kelch_3 PF13415.6 ORF94358 - 5.9e-07 29.6 0.3 0.0001 22.5 0.0 3.0 3 1 0 3 3 3 1 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF94358 - 4e-06 26.7 0.0 0.28 11.2 0.0 3.2 3 0 0 3 3 3 2 Kelch motif DUF1668 PF07893.13 ORF94358 - 0.0043 16.5 0.0 0.0049 16.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1668) AvrRpt-cleavage PF05627.11 ORF93148 - 0.072 12.5 0.1 0.15 11.5 0.1 1.5 1 0 0 1 1 1 0 Cleavage site for pathogenic type III effector avirulence factor Avr Cytochrom_C_asm PF01578.20 ORF91880 - 3.6e-38 131.5 7.9 4e-38 131.3 7.9 1.1 1 0 0 1 1 1 1 Cytochrome C assembly protein RRM_1 PF00076.22 ORF91223 - 1.8e-09 37.3 0.0 3.2e-09 36.5 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF91223 - 0.12 12.5 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif MORN PF02493.20 ORF90663 - 6.1e-23 79.3 28.5 1.7e-07 30.7 0.4 6.2 6 0 0 6 6 6 6 MORN repeat BssC_TutF PF08201.11 ORF90663 - 0.18 11.8 2.7 0.91 9.6 0.3 2.5 1 1 0 2 2 2 0 BssC/TutF protein MORN PF02493.20 ORF90636 - 4.3e-26 89.2 36.3 3.9e-07 29.6 1.4 5.9 6 0 0 6 6 6 5 MORN repeat SHIPPO-rpt PF07004.12 ORF90342 - 5.2e-05 24.0 24.3 0.0062 17.4 0.6 5.1 5 0 0 5 5 5 3 Sperm-tail PG-rich repeat TAFA PF12020.8 ORF88626 - 0.029 14.8 0.5 0.043 14.3 0.5 1.2 1 0 0 1 1 1 0 TAFA family Proteasom_Rpn13 PF04683.13 ORF88494 - 3.8e-27 94.6 1.0 5.7e-27 94.1 1.0 1.3 1 0 0 1 1 1 1 Proteasome complex subunit Rpn13 ubiquitin receptor DUF5069 PF16798.5 ORF88494 - 0.016 15.4 0.0 0.032 14.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5069) Vac14_Fab1_bd PF12755.7 ORF88105 - 0.052 14.1 0.1 0.096 13.3 0.1 1.6 1 0 0 1 1 1 0 Vacuolar 14 Fab1-binding region FSIP2 PF15783.5 ORF87242 - 0.063 11.2 0.4 0.073 11.0 0.4 1.1 1 0 0 1 1 1 0 Fibrous sheath-interacting protein 2 Methyltransf_11 PF08241.12 ORF8649 - 7.4e-10 39.3 0.0 1e-09 38.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF8649 - 7.9e-10 38.7 0.0 8.8e-10 38.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF8649 - 2.1e-09 38.0 0.0 2.9e-09 37.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF8649 - 6.6e-09 36.4 0.0 9.8e-09 35.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF8649 - 6.4e-08 32.6 0.0 7.2e-08 32.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF8649 - 0.004 16.8 0.0 0.0059 16.2 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CheR PF01739.18 ORF8649 - 0.061 12.8 0.0 2.9 7.3 0.0 2.1 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain NIF3 PF01784.18 ORF86173 - 0.13 11.8 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 NIF3 (NGG1p interacting factor 3) Palm_thioest PF02089.15 ORF85859 - 6.6e-31 108.0 0.1 6.9e-31 107.9 0.1 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Palm_thioest PF02089.15 ORF84406 - 1e-32 113.9 0.0 1.2e-32 113.7 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase LZ_Tnp_IS66 PF13007.7 ORF80025 - 0.0078 17.0 0.0 0.024 15.4 0.0 1.8 1 1 0 1 1 1 1 Transposase C of IS166 homeodomain EPL1 PF10513.9 ORF79788 - 1.7 9.0 15.9 2.8 8.3 15.9 1.3 1 0 0 1 1 1 0 Enhancer of polycomb-like TerB_C PF15615.6 ORF79788 - 3.5 7.9 8.7 6.1 7.1 8.7 1.5 1 1 0 1 1 1 0 TerB-C domain DUF572 PF04502.13 ORF79788 - 4.6 6.8 28.0 5.2 6.6 28.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) Presenilin PF01080.17 ORF79788 - 6.9 5.3 14.7 7.9 5.1 14.7 1.1 1 0 0 1 1 1 0 Presenilin Pkinase PF00069.25 ORF79257 - 5.1e-06 26.0 0.0 9.1e-06 25.2 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Peptidase_C48 PF02902.19 ORF79257 - 0.015 15.1 0.4 0.028 14.3 0.3 1.5 1 1 0 1 1 1 0 Ulp1 protease family, C-terminal catalytic domain Pacifastin_I PF05375.13 ORF79079 - 8.9e-06 25.3 36.3 0.0014 18.3 5.1 3.4 3 0 0 3 3 3 3 Pacifastin inhibitor (LCMII) WW PF00397.26 ORF79072 - 9.3e-07 28.8 0.4 9.3e-07 28.8 0.4 2.5 2 0 0 2 2 2 1 WW domain CLTH PF10607.9 ORF78793 - 1.7e-20 73.4 8.2 2.8e-20 72.7 8.2 1.3 1 0 0 1 1 1 1 CTLH/CRA C-terminal to LisH motif domain LisH PF08513.11 ORF78793 - 2.7e-10 39.8 0.1 5.2e-10 38.9 0.1 1.5 1 0 0 1 1 1 1 LisH DUF4901 PF16244.5 ORF78793 - 0.034 13.5 0.2 0.061 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4901) Ribosomal_L36e PF01158.18 ORF78793 - 0.065 13.5 0.3 0.12 12.7 0.3 1.5 1 0 0 1 1 1 0 Ribosomal protein L36e Anthrax_toxA PF03497.16 ORF78793 - 0.32 11.1 3.9 1.4 9.0 0.7 2.1 1 1 1 2 2 2 0 Anthrax toxin LF subunit BTB_2 PF02214.22 ORF76689 - 4.5e-05 23.7 0.0 0.001 19.4 0.0 2.4 2 0 0 2 2 2 1 BTB/POZ domain TRP PF06011.12 ORF76487 - 0.00053 18.8 7.5 0.00066 18.5 7.5 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel TctB PF07331.11 ORF76487 - 0.13 12.5 14.0 0.17 12.1 1.8 2.2 1 1 1 2 2 2 0 Tripartite tricarboxylate transporter TctB family YajC PF02699.15 ORF76487 - 0.15 11.9 3.9 9.5 6.2 0.1 2.7 2 1 0 2 2 2 0 Preprotein translocase subunit DUF4131 PF13567.6 ORF76487 - 1.7 8.3 4.0 2.7 7.6 1.5 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4131) DUF2085 PF09858.9 ORF76487 - 2.8 8.5 6.5 2.1 8.8 4.0 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2085) DUF2070 PF09843.9 ORF76487 - 4.5 5.5 7.5 6.3 5.0 7.5 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) UPF0242 PF06785.11 ORF76096 - 0.13 12.3 1.9 0.11 12.6 0.3 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus FAM199X PF15814.5 ORF73859 - 0.2 10.7 7.5 0.26 10.3 7.5 1.2 1 0 0 1 1 1 0 Protein family FAM199X IHO1 PF15771.5 ORF73859 - 0.32 9.7 11.0 0.36 9.6 11.0 1.1 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 DHC PF09626.10 ORF73859 - 0.44 11.4 3.5 0.7 10.8 3.5 1.3 1 0 0 1 1 1 0 Dihaem cytochrome c Fib_alpha PF08702.10 ORF73005 - 0.13 12.4 0.5 0.2 11.8 0.5 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family NusG_II PF07009.11 ORF72994 - 0.16 12.2 0.1 0.3 11.3 0.0 1.5 2 0 0 2 2 2 0 NusG domain II Shisa PF13908.6 ORF72233 - 0.013 15.8 0.3 0.017 15.4 0.3 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Bap31 PF05529.12 ORF72233 - 1.1 9.1 3.9 0.41 10.5 1.5 1.5 2 1 0 2 2 2 0 Bap31/Bap29 transmembrane region Connexin40_C PF16791.5 ORF72233 - 2.5 9.4 6.8 4.7 8.5 6.8 1.5 1 1 0 1 1 1 0 Connexin 40 C-terminal domain GAS PF13851.6 ORF69720 - 0.00033 20.1 24.1 0.00033 20.1 24.1 1.4 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF69720 - 0.00075 17.2 19.1 0.00082 17.0 19.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Fib_alpha PF08702.10 ORF69720 - 0.0057 16.8 16.2 0.0057 16.8 16.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family Pilus_CpaD PF09476.10 ORF69720 - 0.028 14.1 0.0 0.069 12.9 0.0 1.5 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) Spc7 PF08317.11 ORF69720 - 0.03 13.2 21.0 0.038 12.9 21.0 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein SlyX PF04102.12 ORF69720 - 0.048 14.3 13.9 0.29 11.8 3.1 2.5 1 1 1 2 2 2 0 SlyX DUF948 PF06103.11 ORF69720 - 0.1 12.9 1.5 0.19 12.0 1.3 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Atg14 PF10186.9 ORF69720 - 0.11 11.5 20.9 0.16 11.0 20.9 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3450 PF11932.8 ORF69720 - 0.15 11.3 19.1 0.038 13.3 16.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF1664 PF07889.12 ORF69720 - 0.2 11.7 13.9 0.29 11.2 9.8 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Tnp_22_trimer PF17489.2 ORF69720 - 0.34 10.9 9.0 3.2 7.8 0.8 2.8 2 1 0 2 2 2 0 L1 transposable element trimerization domain Muted PF14942.6 ORF69720 - 0.37 11.1 25.3 0.12 12.7 21.9 1.8 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein UPF0242 PF06785.11 ORF69720 - 0.41 10.7 29.9 0.67 10.0 29.9 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HemX PF04375.14 ORF69720 - 0.5 9.6 15.5 0.15 11.4 12.6 1.6 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase AAA_13 PF13166.6 ORF69720 - 0.5 8.9 24.2 0.024 13.3 14.5 1.8 1 1 0 1 1 1 0 AAA domain Cep57_MT_bd PF06657.13 ORF69720 - 0.84 10.1 20.1 0.16 12.4 6.7 3.2 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF4407 PF14362.6 ORF69720 - 1 8.6 14.8 1.1 8.5 14.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Laminin_II PF06009.12 ORF69720 - 1.4 8.9 17.4 1.8 8.6 12.3 2.1 1 1 1 2 2 2 0 Laminin Domain II IFT57 PF10498.9 ORF69720 - 1.5 7.7 23.9 0.21 10.5 19.3 1.7 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Nup88 PF10168.9 ORF69720 - 1.7 6.4 17.2 1.8 6.3 17.2 1.2 1 0 0 1 1 1 0 Nuclear pore component Exonuc_VII_L PF02601.15 ORF69720 - 2 7.9 16.0 2.1 7.8 16.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Malate_DH PF12434.8 ORF69720 - 5 7.2 6.9 31 4.7 0.7 3.2 2 1 1 3 3 3 0 Malate dehydrogenase enzyme Prefoldin_2 PF01920.20 ORF69720 - 5.2 7.1 29.1 0.5 10.3 8.3 3.5 1 1 2 3 3 3 0 Prefoldin subunit Prefoldin PF02996.17 ORF69720 - 6.4 6.7 21.1 0.23 11.4 5.8 3.4 1 1 3 4 4 4 0 Prefoldin subunit Swi5 PF07061.11 ORF69720 - 6.9 6.8 21.2 1.5 9.0 5.3 3.1 2 1 1 3 3 3 0 Swi5 V_ATPase_I PF01496.19 ORF69720 - 6.9 4.5 17.2 7.4 4.3 17.2 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Tweety PF04906.13 ORF69720 - 9.7 4.7 9.1 7.8 5.0 2.3 2.0 1 1 0 2 2 2 0 Tweety Isochorismatase PF00857.20 ORF68797 - 3.3e-29 102.3 0.2 4.1e-29 102.0 0.2 1.1 1 0 0 1 1 1 1 Isochorismatase family GyrB_insert PF18053.1 ORF67353 - 0.021 14.7 0.6 0.027 14.4 0.6 1.2 1 0 0 1 1 1 0 DNA gyrase B subunit insert domain CdvA PF18822.1 ORF67353 - 0.023 14.5 2.7 1.7 8.5 1.0 2.6 1 1 2 3 3 3 0 CdvA-like coiled-coil domain HLH PF00010.26 ORF67353 - 0.14 12.1 0.4 0.36 10.8 0.1 1.8 2 0 0 2 2 2 0 Helix-loop-helix DNA-binding domain Ground-like PF04155.18 ORF67218 - 0.076 13.7 0.3 0.13 13.0 0.3 1.4 1 0 0 1 1 1 0 Ground-like domain STAT_alpha PF01017.20 ORF65267 - 0.0015 18.5 6.5 0.34 10.8 0.9 2.3 1 1 2 3 3 3 2 STAT protein, all-alpha domain TMF_TATA_bd PF12325.8 ORF65267 - 0.0028 17.9 12.3 0.027 14.7 0.8 3.0 1 1 2 3 3 3 1 TATA element modulatory factor 1 TATA binding KapB PF08810.10 ORF65267 - 0.0037 17.4 3.3 0.029 14.5 0.3 2.4 2 0 0 2 2 2 1 Kinase associated protein B DUF2935 PF11155.8 ORF65267 - 0.0056 17.0 0.0 0.013 15.8 0.0 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF2935) ApoLp-III PF07464.11 ORF65267 - 0.013 15.6 5.9 0.025 14.7 1.7 2.1 1 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) SOGA PF11365.8 ORF65267 - 0.018 16.2 3.0 0.018 16.2 3.0 2.8 1 1 1 2 2 2 0 Protein SOGA DIT1_PvcA PF05141.12 ORF65267 - 0.023 14.2 2.3 0.032 13.7 2.3 1.2 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein Flagellar_rod PF05149.12 ORF65267 - 0.035 13.6 10.2 0.16 11.4 0.5 2.1 1 1 1 2 2 2 0 Paraflagellar rod protein APG6_N PF17675.1 ORF65267 - 0.09 13.3 17.6 0.064 13.8 14.0 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region Syntaxin_2 PF14523.6 ORF65267 - 0.099 13.0 9.5 18 5.8 9.5 2.8 1 1 0 1 1 1 0 Syntaxin-like protein Bacillus_HBL PF05791.11 ORF65267 - 0.11 12.3 8.5 0.29 11.0 8.5 1.6 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) DUF948 PF06103.11 ORF65267 - 0.12 12.7 5.3 0.31 11.3 0.5 2.3 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Spc7 PF08317.11 ORF65267 - 0.12 11.2 12.9 0.29 10.0 12.7 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein ANAPC4 PF12896.7 ORF65267 - 0.17 11.4 3.4 3.1 7.3 0.5 2.1 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 4 Vip3A_N PF12495.8 ORF65267 - 0.19 11.6 3.7 4 7.3 0.2 2.2 2 1 0 2 2 2 0 Vegetative insecticide protein 3A N terminal CENP-H PF05837.12 ORF65267 - 0.23 11.9 8.8 0.27 11.6 3.0 2.4 1 1 1 2 2 2 0 Centromere protein H (CENP-H) OmpH PF03938.14 ORF65267 - 0.29 11.5 12.2 1.5 9.1 0.9 2.3 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) DUF3958 PF13125.6 ORF65267 - 0.35 11.1 9.0 3.2 8.0 1.0 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3958) Baculo_PEP_C PF04513.12 ORF65267 - 0.58 10.2 5.8 62 3.6 5.7 2.1 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus IZUMO PF15005.6 ORF65267 - 0.81 10.2 5.9 0.64 10.5 3.2 1.9 1 1 1 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated UPF0242 PF06785.11 ORF65267 - 0.83 9.7 15.0 4.6 7.3 5.8 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus HIP1_clath_bdg PF16515.5 ORF65267 - 1.2 9.8 12.0 1.8 9.2 0.8 2.3 1 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF3450 PF11932.8 ORF65267 - 1.3 8.2 11.8 1.8 7.8 4.1 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) Fib_alpha PF08702.10 ORF65267 - 1.9 8.7 9.7 5.5 7.2 0.9 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF4559 PF15112.6 ORF65267 - 2.2 7.9 11.1 2.8 7.5 11.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) DUF4375 PF14300.6 ORF65267 - 2.5 8.4 8.6 3.1 8.1 2.4 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) LMBR1 PF04791.16 ORF65267 - 2.7 6.8 6.1 3.4 6.5 6.1 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Tup_N PF08581.10 ORF65267 - 3.5 8.0 11.6 5.5 7.4 1.8 2.7 1 1 1 3 3 2 0 Tup N-terminal TMPIT PF07851.13 ORF65267 - 6.9 5.8 9.9 10 5.2 0.3 2.0 1 1 0 2 2 2 0 TMPIT-like protein V_ATPase_I PF01496.19 ORF65267 - 9.9 3.9 8.0 20 2.9 8.0 1.5 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family LRR_6 PF13516.6 ORF65262 - 3.5e-05 23.5 0.0 0.0057 16.6 0.1 2.5 2 0 0 2 2 2 2 Leucine Rich repeat FAM199X PF15814.5 ORF65262 - 0.0033 16.5 0.4 0.0033 16.5 0.4 1.1 1 0 0 1 1 1 1 Protein family FAM199X LRR_4 PF12799.7 ORF65262 - 0.0066 16.8 1.6 0.15 12.5 0.1 2.8 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) EIIBC-GUT_N PF03612.14 ORF65262 - 0.011 15.5 0.5 0.014 15.1 0.5 1.2 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus GAS PF13851.6 ORF64859 - 0.00033 20.1 24.1 0.00033 20.1 24.1 1.4 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF64859 - 0.0012 16.5 20.0 0.0013 16.4 20.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Fib_alpha PF08702.10 ORF64859 - 0.0057 16.8 16.2 0.0057 16.8 16.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family SlyX PF04102.12 ORF64859 - 0.046 14.4 13.9 0.29 11.8 3.1 2.6 1 1 1 2 2 2 0 SlyX DUF948 PF06103.11 ORF64859 - 0.1 12.9 1.5 0.19 12.0 1.3 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 ORF64859 - 0.12 11.6 18.9 0.043 13.1 16.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Atg14 PF10186.9 ORF64859 - 0.17 11.0 21.5 0.23 10.5 21.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF64859 - 0.18 10.7 23.6 0.21 10.4 23.1 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF64859 - 0.19 11.8 14.0 0.33 11.0 10.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Tnp_22_trimer PF17489.2 ORF64859 - 0.34 10.9 9.0 3.2 7.8 0.8 2.8 2 1 0 2 2 2 0 L1 transposable element trimerization domain UPF0242 PF06785.11 ORF64859 - 0.42 10.7 29.7 0.78 9.8 29.7 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Muted PF14942.6 ORF64859 - 0.47 10.8 25.8 0.14 12.5 22.0 1.9 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein AAA_13 PF13166.6 ORF64859 - 0.47 9.0 24.1 0.014 14.1 13.5 1.8 1 1 0 1 1 1 0 AAA domain HemX PF04375.14 ORF64859 - 0.72 9.1 16.3 0.12 11.7 12.3 1.7 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Cep57_MT_bd PF06657.13 ORF64859 - 0.77 10.3 20.1 0.16 12.4 6.7 3.3 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF4407 PF14362.6 ORF64859 - 1.3 8.4 15.1 1.4 8.2 15.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) IFT57 PF10498.9 ORF64859 - 1.6 7.6 24.1 0.21 10.5 19.3 1.7 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Nup88 PF10168.9 ORF64859 - 1.6 6.5 17.1 1.7 6.4 17.1 1.2 1 0 0 1 1 1 0 Nuclear pore component Laminin_II PF06009.12 ORF64859 - 1.7 8.7 17.4 1.7 8.6 12.2 2.1 1 1 1 2 2 2 0 Laminin Domain II Exonuc_VII_L PF02601.15 ORF64859 - 1.9 8.0 15.9 2 7.9 15.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_2 PF01920.20 ORF64859 - 4 7.4 28.6 0.48 10.4 8.3 3.4 1 1 1 2 2 2 0 Prefoldin subunit Malate_DH PF12434.8 ORF64859 - 4.9 7.3 6.9 31 4.7 0.7 3.2 2 1 1 3 3 3 0 Malate dehydrogenase enzyme Prefoldin PF02996.17 ORF64859 - 5.5 6.9 20.9 0.23 11.4 5.8 3.4 1 1 3 4 4 4 0 Prefoldin subunit Swi5 PF07061.11 ORF64859 - 6.5 6.9 21.2 1.5 9.0 5.3 3.1 2 1 1 3 3 3 0 Swi5 Tweety PF04906.13 ORF64859 - 8.3 5.0 8.9 6.8 5.2 2.3 2.0 1 1 1 2 2 2 0 Tweety Phage_GPO PF05929.11 ORF64859 - 8.3 5.9 15.2 17 4.9 15.2 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase V_ATPase_I PF01496.19 ORF64859 - 8.4 4.2 17.5 9.1 4.0 17.5 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MctB PF11382.8 ORF64859 - 10 5.8 11.2 1.6 8.4 4.0 2.1 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB cNMP_binding PF00027.29 ORF63322 - 1.7e-13 50.5 0.0 2.5e-13 49.9 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain SH3_9 PF14604.6 ORF63322 - 0.077 12.9 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Variant SH3 domain Sod_Cu PF00080.20 ORF62980 - 3.7e-44 150.3 6.1 4.3e-44 150.1 6.1 1.0 1 0 0 1 1 1 1 Copper/zinc superoxide dismutase (SODC) TACI-CRD2 PF09305.10 ORF61557 - 0.57 10.3 1.7 0.74 9.9 0.1 1.8 2 0 0 2 2 2 0 TACI, cysteine-rich domain SSB PF00436.25 ORF61288 - 5.7e-40 135.6 0.2 7e-40 135.3 0.2 1.1 1 0 0 1 1 1 1 Single-strand binding protein family Aldedh PF00171.22 ORF58961 - 1.9e-13 49.8 0.1 2.2e-13 49.6 0.1 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Peptidase_C71 PF12386.8 ORF58961 - 0.058 13.0 0.0 0.094 12.4 0.0 1.3 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei AvrRpt-cleavage PF05627.11 ORF58131 - 0.063 12.6 0.1 0.15 11.5 0.1 1.6 1 0 0 1 1 1 0 Cleavage site for pathogenic type III effector avirulence factor Avr GAS PF13851.6 ORF55374 - 0.00033 20.1 24.1 0.00033 20.1 24.1 1.4 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF55374 - 0.0012 16.5 20.0 0.0013 16.4 20.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Fib_alpha PF08702.10 ORF55374 - 0.0057 16.8 16.2 0.0057 16.8 16.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family SlyX PF04102.12 ORF55374 - 0.046 14.4 13.9 0.29 11.8 3.1 2.6 1 1 1 2 2 2 0 SlyX DUF948 PF06103.11 ORF55374 - 0.1 12.9 1.5 0.19 12.0 1.3 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 ORF55374 - 0.12 11.6 18.9 0.043 13.1 16.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Atg14 PF10186.9 ORF55374 - 0.17 11.0 21.5 0.23 10.5 21.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF55374 - 0.18 10.7 23.6 0.21 10.4 23.1 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF55374 - 0.19 11.8 14.0 0.33 11.0 10.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Tnp_22_trimer PF17489.2 ORF55374 - 0.34 10.9 9.0 3.2 7.8 0.8 2.8 2 1 0 2 2 2 0 L1 transposable element trimerization domain UPF0242 PF06785.11 ORF55374 - 0.42 10.7 29.7 0.78 9.8 29.7 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Muted PF14942.6 ORF55374 - 0.47 10.8 25.8 0.14 12.5 22.0 1.9 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein AAA_13 PF13166.6 ORF55374 - 0.47 9.0 24.1 0.014 14.1 13.5 1.8 1 1 0 1 1 1 0 AAA domain HemX PF04375.14 ORF55374 - 0.72 9.1 16.3 0.12 11.7 12.3 1.7 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Cep57_MT_bd PF06657.13 ORF55374 - 0.77 10.3 20.1 0.16 12.4 6.7 3.3 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF4407 PF14362.6 ORF55374 - 1.3 8.4 15.1 1.4 8.2 15.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) IFT57 PF10498.9 ORF55374 - 1.6 7.6 24.1 0.21 10.5 19.3 1.7 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Nup88 PF10168.9 ORF55374 - 1.6 6.5 17.1 1.7 6.4 17.1 1.2 1 0 0 1 1 1 0 Nuclear pore component Laminin_II PF06009.12 ORF55374 - 1.7 8.7 17.4 1.7 8.6 12.2 2.1 1 1 1 2 2 2 0 Laminin Domain II Exonuc_VII_L PF02601.15 ORF55374 - 1.9 8.0 15.9 2 7.9 15.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_2 PF01920.20 ORF55374 - 4 7.4 28.6 0.48 10.4 8.3 3.4 1 1 1 2 2 2 0 Prefoldin subunit Malate_DH PF12434.8 ORF55374 - 4.9 7.3 6.9 31 4.7 0.7 3.2 2 1 1 3 3 3 0 Malate dehydrogenase enzyme Prefoldin PF02996.17 ORF55374 - 5.5 6.9 20.9 0.23 11.4 5.8 3.4 1 1 3 4 4 4 0 Prefoldin subunit Swi5 PF07061.11 ORF55374 - 6.5 6.9 21.2 1.5 9.0 5.3 3.1 2 1 1 3 3 3 0 Swi5 Tweety PF04906.13 ORF55374 - 8.3 5.0 8.9 6.8 5.2 2.3 2.0 1 1 1 2 2 2 0 Tweety Phage_GPO PF05929.11 ORF55374 - 8.3 5.9 15.2 17 4.9 15.2 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase V_ATPase_I PF01496.19 ORF55374 - 8.4 4.2 17.5 9.1 4.0 17.5 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MctB PF11382.8 ORF55374 - 10 5.8 11.2 1.6 8.4 4.0 2.1 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB DUF5585 PF17823.1 ORF5518 - 0.16 10.9 8.1 0.17 10.8 8.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5585) Macoilin PF09726.9 ORF54616 - 9.6 4.6 22.4 15 4.0 22.4 1.2 1 0 0 1 1 1 0 Macoilin family SH3_3 PF08239.11 ORF53028 - 0.0013 19.0 0.1 0.0021 18.3 0.1 1.4 1 0 0 1 1 1 1 Bacterial SH3 domain Sporozoite_P67 PF05642.11 ORF52794 - 0.16 10.0 3.4 0.17 9.9 3.4 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen CobT PF06213.12 ORF52794 - 1.5 8.2 10.1 1.9 7.8 10.1 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT CDC45 PF02724.14 ORF52794 - 2.4 6.4 11.4 2.9 6.1 11.4 1.0 1 0 0 1 1 1 0 CDC45-like protein YL1 PF05764.13 ORF52794 - 4.3 7.4 15.2 5.8 7.0 15.2 1.1 1 0 0 1 1 1 0 YL1 nuclear protein FAM176 PF14851.6 ORF52794 - 5.3 6.7 8.2 7.3 6.2 8.2 1.2 1 0 0 1 1 1 0 FAM176 family GP67 PF17634.2 ORF52794 - 8.1 6.9 20.3 14 6.2 20.3 1.4 1 0 0 1 1 1 0 Gene product 67 NOA36 PF06524.12 ORF52794 - 8.2 5.7 14.1 11 5.2 14.1 1.1 1 0 0 1 1 1 0 NOA36 protein DNA_Packaging PF11053.8 ORF52620 - 0.11 12.3 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Terminase DNA packaging enzyme CobS PF02654.15 ORF52620 - 0.82 9.8 3.2 0.34 11.1 0.4 1.7 1 1 1 2 2 2 0 Cobalamin-5-phosphate synthase zf-C2H2_2 PF12756.7 ORF52435 - 1.5e-06 28.5 8.6 0.0009 19.5 4.5 2.3 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 ORF52435 - 1.8e-06 28.1 16.8 5.5e-06 26.5 7.1 3.0 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF52435 - 7.9e-06 26.1 13.8 3.8e-05 23.9 4.2 2.6 3 0 0 3 3 3 2 Zinc-finger of C2H2 type zf-DBF PF07535.12 ORF52435 - 0.00023 21.2 7.1 0.05 13.7 2.1 2.7 2 0 0 2 2 2 2 DBF zinc finger DUF629 PF04780.12 ORF52435 - 0.0014 17.3 4.2 0.074 11.6 1.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF629) OrfB_IS605 PF01385.19 ORF52435 - 0.019 15.2 2.1 0.022 15.0 0.8 1.8 2 0 0 2 2 2 0 Probable transposase zf-C2H2_4 PF13894.6 ORF52435 - 0.026 15.3 6.1 0.36 11.8 0.9 2.7 2 0 0 2 2 2 0 C2H2-type zinc finger AKAP95 PF04988.12 ORF52435 - 0.039 14.2 7.5 0.24 11.6 1.4 2.7 2 1 0 2 2 2 0 A-kinase anchoring protein 95 (AKAP95) SNF2_N PF00176.23 ORF52435 - 0.083 11.6 3.2 0.093 11.4 3.2 1.1 1 0 0 1 1 1 0 SNF2 family N-terminal domain zf-C2H2_3rep PF18868.1 ORF52435 - 0.093 13.4 7.0 0.12 13.1 3.0 2.1 1 1 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_6 PF13912.6 ORF52435 - 2.1 8.4 9.6 0.1 12.7 3.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Abhydrolase_4 PF08386.10 ORF49026 - 0.17 12.0 0.1 1.6 8.9 0.1 2.0 1 1 1 2 2 2 0 TAP-like protein MoaC PF01967.21 ORF47846 - 8.9e-58 194.2 1.6 1e-57 194.0 1.6 1.0 1 0 0 1 1 1 1 MoaC family EF-hand_1 PF00036.32 ORF47193 - 1.3e-06 27.5 8.2 0.0025 17.2 1.7 3.9 3 1 1 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF47193 - 3.7e-06 27.3 3.9 0.00017 21.9 1.1 3.2 2 2 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF47193 - 0.00049 19.8 9.1 0.04 13.9 1.7 3.8 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF47193 - 0.029 13.9 0.7 0.27 10.8 0.1 2.4 2 0 0 2 2 2 0 EF hand EF-hand_8 PF13833.6 ORF47193 - 0.077 12.8 3.6 1.6 8.7 1.4 3.3 3 0 0 3 3 3 0 EF-hand domain pair PTR PF12789.7 ORF47193 - 0.13 12.4 0.4 12 6.1 0.1 2.3 2 0 0 2 2 2 0 Phage tail repeat like Ndc1_Nup PF09531.10 ORF45026 - 0.0053 15.5 0.6 0.0072 15.1 0.6 1.2 1 0 0 1 1 1 1 Nucleoporin protein Ndc1-Nup EF-hand_7 PF13499.6 ORF44654 - 4.8e-17 62.2 1.1 1.6e-08 34.9 0.5 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF44654 - 2.3e-09 36.1 2.8 2.3e-06 26.8 0.0 4.4 5 0 0 5 5 5 1 EF hand EF-hand_6 PF13405.6 ORF44654 - 3.3e-09 35.9 3.0 1.4e-06 27.7 0.2 3.6 4 0 0 4 4 4 1 EF-hand domain EF-hand_9 PF14658.6 ORF44654 - 0.0056 17.0 0.0 4.6 7.6 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF44654 - 0.017 15.0 0.4 0.39 10.6 0.1 3.1 2 2 2 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF44654 - 0.021 14.3 0.9 0.059 12.9 0.1 2.1 2 0 0 2 2 2 0 EF hand EFhand_Ca_insen PF08726.10 ORF44654 - 0.067 13.3 0.1 0.16 12.1 0.1 1.8 1 1 0 1 1 1 0 Ca2+ insensitive EF hand Med15_fungi PF05397.12 ORF44654 - 0.093 13.0 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 15 Pribosyltran_N PF13793.6 ORF44437 - 5.8e-26 90.7 0.2 1.6e-25 89.3 0.0 1.7 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase ADIP PF11559.8 ORF42634 - 0.013 15.6 6.3 0.013 15.6 6.3 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding ZapB PF06005.12 ORF42634 - 0.017 15.5 5.7 0.017 15.5 5.7 3.3 1 1 1 3 3 3 0 Cell division protein ZapB DUF676 PF05057.14 ORF42634 - 0.033 13.7 2.4 0.038 13.5 1.9 1.4 1 1 0 1 1 1 0 Putative serine esterase (DUF676) Seryl_tRNA_N PF02403.22 ORF42634 - 0.22 11.8 22.9 0.19 12.0 19.5 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain SHE3 PF17078.5 ORF42634 - 0.3 10.8 23.4 2.5 7.8 4.0 2.5 1 1 1 2 2 2 0 SWI5-dependent HO expression protein 3 PRKG1_interact PF15898.5 ORF42634 - 0.36 11.8 25.2 1.9e+02 3.0 24.5 3.0 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain APG6_N PF17675.1 ORF42634 - 0.48 10.9 28.3 5.3 7.6 11.1 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region TPR_MLP1_2 PF07926.12 ORF42634 - 0.68 10.0 25.6 1.1 9.3 15.8 2.4 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein LXG PF04740.12 ORF42634 - 0.68 9.6 17.6 1.4 8.6 17.6 1.5 1 1 0 1 1 1 0 LXG domain of WXG superfamily Mod_r PF07200.13 ORF42634 - 0.69 10.0 24.2 0.31 11.1 14.2 2.1 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Cor1 PF04803.12 ORF42634 - 0.95 9.7 25.2 4.4 7.5 24.6 1.9 1 1 0 1 1 1 0 Cor1/Xlr/Xmr conserved region DUF4672 PF15716.5 ORF42634 - 2.1 7.9 8.0 1.6 8.3 6.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4672) DUF4407 PF14362.6 ORF42634 - 3.5 6.9 18.4 0.16 11.3 10.7 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Jnk-SapK_ap_N PF09744.9 ORF42634 - 8.4 6.6 25.9 0.85 9.8 13.8 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DNA_topoisoIV PF00521.20 ORF42634 - 8.7 5.1 17.6 11 4.8 17.6 1.2 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A DUF948 PF06103.11 ORF42634 - 9.2 6.6 11.4 7 7.0 1.5 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Kinesin PF00225.23 ORF41934 - 9.5e-19 67.5 0.0 1.2e-18 67.1 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain DNA_pol_A_exo1 PF01612.20 ORF41583 - 9.7e-12 44.9 0.0 1.3e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 3'-5' exonuclease PhyH PF05721.13 ORF41458 - 3.6e-07 30.7 0.0 4.5e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Cytochrome_CBB3 PF13442.6 ORF40879 - 6.8e-16 58.3 0.1 1.1e-15 57.7 0.1 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF40879 - 3.6e-07 31.2 0.5 4.6e-06 27.7 0.5 2.2 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF40879 - 7.3e-05 22.5 0.3 0.0003 20.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain CcmF_C PF16327.5 ORF4044 - 0.069 12.4 0.0 0.089 12.1 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c-type biogenesis protein CcmF C-terminal DUF5617 PF18493.1 ORF4044 - 0.093 12.8 0.5 0.14 12.3 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) Glyco_transf_41 PF13844.6 ORF40418 - 0.0025 16.3 2.2 0.003 16.1 2.2 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 41 Sec20 PF03908.13 ORF40039 - 1.1e-05 25.2 3.4 7.7e-05 22.5 0.5 2.6 1 1 1 2 2 2 1 Sec20 V-SNARE_C PF12352.8 ORF40039 - 6.8e-05 23.1 2.9 6.8e-05 23.1 2.9 1.6 2 0 0 2 2 2 1 Snare region anchored in the vesicle membrane C-terminus Chordopox_G2 PF05796.12 ORF40039 - 0.038 13.4 1.1 0.047 13.1 1.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus protein G2 RabGAP-TBC PF00566.18 ORF40039 - 0.068 12.8 1.2 0.097 12.3 0.7 1.4 1 1 0 1 1 1 0 Rab-GTPase-TBC domain Laminin_II PF06009.12 ORF40039 - 0.082 12.9 4.8 0.48 10.4 0.6 2.1 1 1 1 2 2 2 0 Laminin Domain II Prefoldin_2 PF01920.20 ORF40039 - 0.11 12.5 2.4 0.26 11.3 0.1 2.2 2 0 0 2 2 2 0 Prefoldin subunit DUF1640 PF07798.11 ORF40039 - 0.24 11.4 6.7 0.92 9.5 6.7 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) TssN PF17555.2 ORF40039 - 0.34 10.2 5.9 0.13 11.6 1.0 2.0 2 0 0 2 2 2 0 Type VI secretion system, TssN YabA PF06156.13 ORF40039 - 2.2 9.0 5.9 7.5 7.3 5.9 1.9 1 1 0 1 1 1 0 Initiation control protein YabA DASH_Dad1 PF08649.10 ORF40039 - 2.4 8.4 5.7 10 6.4 0.0 2.7 3 0 0 3 3 3 0 DASH complex subunit Dad1 EF-hand_1 PF00036.32 ORF39004 - 9.1e-08 31.1 0.2 0.011 15.2 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF39004 - 1e-06 28.2 1.5 0.035 14.0 0.0 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF39004 - 3.9e-06 27.2 7.6 0.011 16.2 1.9 2.3 1 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF39004 - 1.5e-05 24.2 0.5 0.014 14.9 0.1 2.7 2 0 0 2 2 2 2 EF hand PPP4R2 PF09184.11 ORF39004 - 1.8 8.0 16.3 2.2 7.8 16.3 1.2 1 0 0 1 1 1 0 PPP4R2 THOC2_N PF16134.5 ORF39004 - 2.1 6.9 6.7 3.2 6.3 6.7 1.3 1 0 0 1 1 1 0 THO complex subunit 2 N-terminus RPN2_C PF18004.1 ORF39004 - 5 7.0 7.7 6.9 6.6 7.7 1.3 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain LMBR1 PF04791.16 ORF38829 - 0.014 14.4 6.1 0.015 14.2 6.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Plasmodium_Vir PF05795.11 ORF38829 - 0.026 14.0 9.2 0.03 13.7 9.2 1.0 1 0 0 1 1 1 0 Plasmodium vivax Vir protein DUF4776 PF16003.5 ORF38829 - 0.051 12.6 12.3 0.053 12.5 12.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4776) GCD14 PF08704.10 ORF38829 - 0.21 11.2 4.6 0.26 10.9 4.6 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Rrn6 PF10214.9 ORF38829 - 0.31 9.5 7.7 0.33 9.4 7.7 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DDHD PF02862.17 ORF38829 - 1.1 9.4 8.8 1.1 9.3 8.8 1.1 1 0 0 1 1 1 0 DDHD domain DUF2151 PF10221.9 ORF38829 - 1.3 7.5 12.2 1.4 7.4 12.2 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator DUF4366 PF14283.6 ORF38829 - 1.5 8.8 13.0 0.023 14.8 4.1 1.9 1 1 1 2 2 1 0 Domain of unknown function (DUF4366) Exonuc_VII_L PF02601.15 ORF38829 - 1.8 8.1 9.3 1.8 8.1 9.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit V_ATPase_I PF01496.19 ORF38829 - 2.5 5.9 11.9 2.6 5.8 11.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Mitovir_RNA_pol PF05919.11 ORF38829 - 3.1 6.9 5.9 3.6 6.6 5.9 1.0 1 0 0 1 1 1 0 Mitovirus RNA-dependent RNA polymerase Mit_KHE1 PF10173.9 ORF38829 - 3.1 7.8 8.5 3.4 7.7 8.5 1.2 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Spore_III_AB PF09548.10 ORF38829 - 4.4 7.4 12.2 6.2 6.9 12.2 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) ALMT PF11744.8 ORF38829 - 4.8 5.9 12.6 5.1 5.8 12.6 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF3584 PF12128.8 ORF38829 - 5.3 4.4 18.9 5.9 4.3 18.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_13 PF13166.6 ORF38829 - 9.2 4.8 16.8 10 4.6 16.8 1.1 1 0 0 1 1 1 0 AAA domain Zip PF02535.22 ORF38829 - 9.2 5.4 7.1 10 5.2 7.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter DIX PF00778.17 ORF38665 - 7.7e-12 44.9 0.0 9.9e-12 44.5 0.0 1.1 1 0 0 1 1 1 1 DIX domain Ank PF00023.30 ORF38622 - 6e-09 36.0 0.0 1.2e-08 35.0 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat Ank_4 PF13637.6 ORF38622 - 2.9e-08 34.1 0.0 4.6e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF38622 - 5.8e-08 33.2 0.0 9.8e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF38622 - 2.6e-07 30.8 0.0 5.6e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF38622 - 4.3e-05 23.6 0.0 8.4e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat DUF4795 PF16043.5 ORF38303 - 0.032 13.8 0.0 0.045 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) Cytochrome_CBB3 PF13442.6 ORF37599 - 6.8e-16 58.3 0.1 1.1e-15 57.7 0.1 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF37599 - 3.6e-07 31.2 0.5 4.6e-06 27.7 0.5 2.2 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF37599 - 7.3e-05 22.5 0.3 0.0003 20.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain Pkinase PF00069.25 ORF37396 - 7.5e-10 38.6 0.0 1e-09 38.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF37396 - 0.0003 20.2 0.0 0.00042 19.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF37396 - 0.12 11.7 0.0 0.19 11.0 0.0 1.4 1 0 0 1 1 1 0 Kinase-like DUF3778 PF12620.8 ORF37377 - 0.1 12.2 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3778) DUF496 PF04363.12 ORF37377 - 0.49 10.4 3.9 0.37 10.8 2.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF496) Cytochrome_CBB3 PF13442.6 ORF37269 - 6.8e-16 58.3 0.1 1.1e-15 57.7 0.1 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF37269 - 3.6e-07 31.2 0.5 4.6e-06 27.7 0.5 2.2 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF37269 - 7.3e-05 22.5 0.3 0.0003 20.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain EF-hand_7 PF13499.6 ORF37012 - 1.1e-26 93.0 6.3 1.1e-12 48.2 0.3 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF37012 - 2.2e-21 73.7 9.5 3.3e-06 26.2 2.2 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF37012 - 2.2e-19 69.0 15.0 1.2e-08 34.6 1.0 4.2 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF37012 - 7.4e-19 66.0 6.2 3.6e-05 23.4 0.0 4.7 4 2 1 5 5 5 3 EF-hand domain EF-hand_5 PF13202.6 ORF37012 - 2.2e-09 36.4 2.5 0.033 13.7 0.0 4.3 4 0 0 4 4 4 3 EF hand EF-hand_9 PF14658.6 ORF37012 - 6.1e-07 29.7 0.7 0.0015 18.8 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_11 PF08976.11 ORF37012 - 3.4e-05 24.6 0.8 0.0056 17.5 0.1 2.1 1 1 1 2 2 2 1 EF-hand domain EF-hand_4 PF12763.7 ORF37012 - 4.5e-05 23.3 3.6 0.00011 22.2 0.5 2.1 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand DUF1456 PF07308.13 ORF37012 - 0.00057 20.2 2.3 0.033 14.5 0.1 2.8 1 1 2 3 3 3 1 Protein of unknown function (DUF1456) DUF5580 PF17743.1 ORF37012 - 0.002 16.7 0.0 0.83 8.1 0.0 2.0 1 1 1 2 2 2 2 Family of unknown function (DUF5580) SurA_N_2 PF13623.6 ORF37012 - 0.0025 17.7 0.6 0.77 9.6 0.1 2.2 2 0 0 2 2 2 2 SurA N-terminal domain HU-DNA_bdg PF14848.6 ORF37012 - 0.006 16.6 1.8 0.34 10.9 0.0 2.4 1 1 0 2 2 2 1 DNA-binding domain p25-alpha PF05517.12 ORF37012 - 0.0081 16.3 2.1 0.62 10.2 0.6 2.6 2 1 0 2 2 2 1 p25-alpha Phage_tail_L PF05100.12 ORF37012 - 0.014 14.7 0.0 0.55 9.5 0.0 2.0 1 1 1 2 2 2 0 Phage minor tail protein L DUF3349 PF11829.8 ORF37012 - 0.037 14.8 1.3 0.63 10.8 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3349) SPARC_Ca_bdg PF10591.9 ORF37012 - 0.061 13.6 1.2 1.4 9.3 0.0 2.3 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF37012 - 0.074 13.0 2.6 1.9 8.4 0.1 3.0 1 1 1 3 3 3 0 Caleosin related protein HTH_Tnp_Tc3_2 PF01498.18 ORF37012 - 0.14 12.5 0.0 5.4 7.3 0.0 2.3 2 0 0 2 2 2 0 Transposase MORN PF02493.20 ORF36692 - 6.1e-23 79.3 28.5 1.7e-07 30.7 0.4 6.2 6 0 0 6 6 6 6 MORN repeat BssC_TutF PF08201.11 ORF36692 - 0.18 11.8 2.7 0.91 9.6 0.3 2.5 1 1 0 2 2 2 0 BssC/TutF protein Prenyltrans PF00432.21 ORF35220 - 1.5e-36 123.8 0.2 3.5e-13 49.0 0.2 3.1 3 0 0 3 3 3 3 Prenyltransferase and squalene oxidase repeat zf-C2H2_2 PF12756.7 ORF34814 - 1.5e-06 28.5 8.6 0.0009 19.5 4.5 2.3 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 ORF34814 - 1.8e-06 28.1 16.8 5.5e-06 26.5 7.1 3.0 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF34814 - 7.9e-06 26.1 13.8 3.8e-05 23.9 4.2 2.6 3 0 0 3 3 3 2 Zinc-finger of C2H2 type zf-DBF PF07535.12 ORF34814 - 0.00023 21.2 7.1 0.05 13.7 2.1 2.7 2 0 0 2 2 2 2 DBF zinc finger DUF629 PF04780.12 ORF34814 - 0.0014 17.3 4.2 0.074 11.6 1.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF629) OrfB_IS605 PF01385.19 ORF34814 - 0.019 15.2 2.1 0.022 15.0 0.8 1.8 2 0 0 2 2 2 0 Probable transposase zf-C2H2_4 PF13894.6 ORF34814 - 0.026 15.3 6.1 0.36 11.8 0.9 2.7 2 0 0 2 2 2 0 C2H2-type zinc finger AKAP95 PF04988.12 ORF34814 - 0.039 14.2 7.5 0.24 11.6 1.4 2.7 2 1 0 2 2 2 0 A-kinase anchoring protein 95 (AKAP95) SNF2_N PF00176.23 ORF34814 - 0.083 11.6 3.2 0.093 11.4 3.2 1.1 1 0 0 1 1 1 0 SNF2 family N-terminal domain zf-C2H2_3rep PF18868.1 ORF34814 - 0.093 13.4 7.0 0.12 13.1 3.0 2.1 1 1 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_6 PF13912.6 ORF34814 - 2.1 8.4 9.6 0.1 12.7 3.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger 4HBT PF03061.22 ORF32922 - 9.1e-19 67.6 0.1 1.2e-18 67.2 0.1 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 ORF32922 - 5.3e-05 23.6 0.2 7.7e-05 23.1 0.2 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily DUF4442 PF14539.6 ORF32922 - 0.0074 16.4 0.0 0.033 14.3 0.0 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4442) GP52 PF17468.2 ORF32922 - 0.052 13.7 0.5 0.16 12.1 0.0 2.0 2 1 0 2 2 2 0 Phage gene product 52 Ribosomal_L6 PF00347.23 ORF31508 - 5.6e-11 43.0 5.9 1.7e-09 38.2 1.4 2.3 2 0 0 2 2 2 2 Ribosomal protein L6 PP2C PF00481.21 ORF29268 - 7.3e-24 84.8 0.0 8.7e-24 84.5 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF29268 - 8.2e-05 22.6 0.0 9.8e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Herpes_pp85 PF04637.12 ORF28540 - 0.24 9.8 2.0 0.28 9.5 2.0 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) 4HBT PF03061.22 ORF28337 - 5.3e-05 23.5 0.0 8.3e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 ORF28337 - 0.051 14.1 0.0 0.055 14.0 0.0 1.2 1 0 0 1 1 1 0 Thioesterase-like superfamily AgrB PF04647.15 ORF28095 - 0.016 14.6 2.6 0.022 14.1 2.6 1.2 1 0 0 1 1 1 0 Accessory gene regulator B DUF3306 PF11748.8 ORF27845 - 3.2 8.6 6.8 4.3 8.2 6.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3306) LRR_6 PF13516.6 ORF27014 - 0.0084 16.1 0.1 0.036 14.1 0.0 2.0 2 0 0 2 2 2 1 Leucine Rich repeat Sec20 PF03908.13 ORF26373 - 0.0074 16.2 0.4 0.0074 16.2 0.4 1.8 2 1 0 2 2 2 1 Sec20 DUF4407 PF14362.6 ORF26373 - 0.41 10.0 5.1 0.43 9.9 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) LMBR1 PF04791.16 ORF26373 - 2 7.2 7.0 2.1 7.2 7.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DnaJ_CXXCXGXG PF00684.19 ORF26099 - 0.0027 18.0 12.9 0.31 11.4 9.3 2.8 1 1 2 3 3 3 3 DnaJ central domain AFP PF02420.15 ORF26099 - 0.06 13.7 5.1 0.64 10.5 1.6 2.8 2 0 0 2 2 2 0 Insect antifreeze protein repeat zf-C4pol PF14260.6 ORF26099 - 0.062 13.8 5.5 0.36 11.3 0.8 2.9 2 1 1 3 3 3 0 C4-type zinc-finger of DNA polymerase delta Sulfatase_C PF14707.6 ORF26099 - 0.28 11.9 1.3 0.55 11.0 1.3 1.4 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase zf-4CXXC_R1 PF10497.9 ORF26099 - 0.29 11.4 7.7 0.14 12.4 2.5 2.4 1 1 1 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Snapin_Pallidin PF14712.6 ORF26099 - 0.51 10.8 3.9 0.46 10.9 2.7 1.5 2 0 0 2 2 2 0 Snapin/Pallidin Sds3 PF08598.11 ORF26099 - 0.95 9.4 3.5 1.5 8.8 3.5 1.3 1 0 0 1 1 1 0 Sds3-like PhnA_Zn_Ribbon PF08274.12 ORF26099 - 1.8 8.6 7.3 4.6 7.3 0.4 3.0 3 0 0 3 3 3 0 PhnA Zinc-Ribbon Peptidase_M22 PF00814.25 ORF25629 - 2.9e-39 135.4 0.0 3.3e-39 135.2 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Shisa PF13908.6 ORF25593 - 9.3e-05 22.7 0.5 0.00011 22.5 0.5 1.2 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator COX2_TM PF02790.15 ORF25593 - 0.016 15.3 0.1 0.026 14.7 0.1 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain LapA_dom PF06305.11 ORF25593 - 0.064 13.1 0.1 0.092 12.6 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain LptE PF04390.12 ORF2558 - 3.8e-14 53.3 0.1 5.2e-14 52.8 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide-assembly DUF4732 PF15876.5 ORF20952 - 0.044 13.9 0.1 0.061 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4732) ADH_zinc_N PF00107.26 ORF19451 - 1.1e-10 41.5 0.0 1.6e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase YlqD PF11068.8 ORF19321 - 0.00026 21.3 3.3 0.00053 20.4 3.3 1.4 1 0 0 1 1 1 1 YlqD protein V_ATPase_I PF01496.19 ORF19321 - 0.005 14.8 0.7 0.005 14.8 0.7 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Lebercilin PF15619.6 ORF19321 - 0.0059 16.3 5.4 0.009 15.7 5.4 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease RE_TaqI PF09573.10 ORF19321 - 0.0069 16.2 3.0 0.0094 15.8 3.0 1.1 1 0 0 1 1 1 1 TaqI restriction endonuclease DUF3450 PF11932.8 ORF19321 - 0.044 13.1 2.5 0.056 12.7 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) NUP214 PF16755.5 ORF19321 - 0.066 12.4 3.2 0.069 12.4 3.2 1.0 1 0 0 1 1 1 0 Nucleoporin or Nuclear pore complex subunit NUP214=Nup159 Tho2 PF11262.8 ORF19321 - 0.12 11.6 3.2 0.15 11.2 3.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 bZIP_1 PF00170.21 ORF19321 - 0.15 12.2 8.5 0.57 10.3 3.5 2.3 1 1 1 2 2 2 0 bZIP transcription factor TSC22 PF01166.18 ORF19321 - 0.27 11.5 3.4 1.6 9.1 0.9 2.3 2 0 0 2 2 2 0 TSC-22/dip/bun family DUF4806 PF16064.5 ORF19321 - 0.32 11.3 3.8 5.9 7.3 0.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4806) FliD_N PF02465.18 ORF19321 - 1.7 9.4 7.6 0.78 10.5 2.9 2.1 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus XhlA PF10779.9 ORF19321 - 3.9 7.8 6.6 0.73 10.1 1.7 2.2 2 1 0 2 2 2 0 Haemolysin XhlA UPF0242 PF06785.11 ORF19245 - 0.13 12.3 1.9 0.11 12.6 0.3 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus RraA-like PF03737.15 ORF18438 - 3e-36 124.9 0.5 3.3e-36 124.7 0.5 1.0 1 0 0 1 1 1 1 Aldolase/RraA HrpB4 PF09502.10 ORF18189 - 0.068 13.0 0.4 0.08 12.8 0.4 1.3 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB4) Skp1 PF01466.19 ORF16555 - 2.2e-25 88.5 0.5 4.3e-25 87.6 0.5 1.5 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF16555 - 1.2e-17 63.8 0.9 2.7e-17 62.7 0.9 1.6 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain BTB PF00651.31 ORF16555 - 0.0019 18.4 0.1 0.021 15.0 0.1 2.2 1 1 0 1 1 1 1 BTB/POZ domain ALG3 PF05208.13 ORF15444 - 8.2e-20 71.5 9.0 9.3e-20 71.4 9.0 1.0 1 0 0 1 1 1 1 ALG3 protein O_anti_polymase PF01901.16 ORF15444 - 0.022 14.0 13.7 0.057 12.7 5.1 2.1 1 1 1 2 2 2 0 Putative O-antigen polymerase MPS-4 PF17523.2 ORF15444 - 0.31 11.2 5.4 8.5 6.6 1.6 2.4 2 0 0 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF572 PF04502.13 ORF15364 - 2.2e-09 37.4 17.4 2.5e-09 37.2 17.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF572) Tudor_1_RapA PF18339.1 ORF15364 - 0.12 12.3 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 RapA N-terminal Tudor like domain 1 Hexokinase_1 PF00349.21 ORF15364 - 0.22 11.4 3.4 2.2 8.2 3.4 2.0 1 1 0 1 1 1 0 Hexokinase DUF1948 PF09185.10 ORF15364 - 1.4 8.8 9.4 3.4 7.5 0.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1948) Shisa PF13908.6 ORF15229 - 0.013 15.8 0.3 0.017 15.4 0.3 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Bap31 PF05529.12 ORF15229 - 1.1 9.1 3.9 0.41 10.5 1.5 1.5 2 1 0 2 2 2 0 Bap31/Bap29 transmembrane region Connexin40_C PF16791.5 ORF15229 - 2.5 9.4 6.8 4.7 8.5 6.8 1.5 1 1 0 1 1 1 0 Connexin 40 C-terminal domain RRM_1 PF00076.22 ORF13370 - 3.1e-06 26.9 0.0 4.8e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF3617 PF12276.8 ORF13370 - 0.0078 16.5 0.8 0.011 16.0 0.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3617) PHTB1_N PF14727.6 ORF11926 - 1.3e-37 130.2 0.0 1.4e-37 130.0 0.0 1.0 1 0 0 1 1 1 1 PTHB1 N-terminus Synaptobrevin PF00957.21 ORF11873 - 0.038 13.8 1.7 0.099 12.4 1.4 2.0 1 1 0 1 1 1 0 Synaptobrevin OppC_N PF12911.7 ORF11873 - 0.11 12.5 0.1 0.19 11.8 0.1 1.4 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C Ribosomal_L6 PF00347.23 ORF11581 - 5.6e-11 43.0 5.9 1.7e-09 38.2 1.4 2.3 2 0 0 2 2 2 2 Ribosomal protein L6 Exo_endo_phos PF03372.23 ORF112428 - 2.7e-09 36.9 0.0 3.7e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Organ_specific PF10950.8 ORF112428 - 0.12 13.0 3.9 0.25 12.0 3.9 1.6 1 1 0 1 1 1 0 Organ specific protein UAA PF08449.11 ORF112244 - 2.7e-18 66.2 2.7 3e-18 66.1 2.7 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF112244 - 0.86 9.8 7.1 1.5 9.0 7.1 1.4 1 1 0 1 1 1 0 EamA-like transporter family Esterase PF00756.20 ORF109706 - 3.2e-08 33.5 0.0 5.6e-08 32.7 0.0 1.4 1 1 1 2 2 2 1 Putative esterase Peptidase_S9 PF00326.21 ORF109706 - 7.6e-05 22.3 0.0 9e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF109706 - 0.0001 22.1 0.0 0.0002 21.1 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF109706 - 0.00071 18.9 0.0 0.0025 17.1 0.0 1.7 1 1 0 2 2 2 1 Serine aminopeptidase, S33 UPF0242 PF06785.11 ORF109555 - 0.13 12.3 1.9 0.11 12.6 0.3 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus PK_C PF02887.16 ORF108885 - 2.8e-30 104.9 0.3 3.7e-30 104.5 0.3 1.2 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain PK PF00224.21 ORF108885 - 2.2e-07 30.1 0.0 3.1e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PHTB1_N PF14727.6 ORF108348 - 1.3e-37 130.2 0.0 1.4e-37 130.0 0.0 1.0 1 0 0 1 1 1 1 PTHB1 N-terminus PP2C PF00481.21 ORF108206 - 1.9e-15 57.2 0.0 2.2e-15 57.0 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF108206 - 0.00084 19.3 0.0 0.00092 19.2 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) DUF1772 PF08592.11 ORF107961 - 0.023 15.0 1.9 0.032 14.6 1.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) ALG3 PF05208.13 ORF107878 - 8.2e-20 71.5 9.0 9.3e-20 71.4 9.0 1.0 1 0 0 1 1 1 1 ALG3 protein O_anti_polymase PF01901.16 ORF107878 - 0.022 14.0 13.7 0.057 12.7 5.1 2.1 1 1 1 2 2 2 0 Putative O-antigen polymerase MPS-4 PF17523.2 ORF107878 - 0.31 11.2 5.4 8.5 6.6 1.6 2.4 2 0 0 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Zip PF02535.22 ORF107723 - 4.4e-11 42.6 10.6 5.1e-11 42.4 10.6 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter MFS_1 PF07690.16 ORF107314 - 2.4e-05 23.5 11.1 2.8e-05 23.2 11.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DC_STAMP PF07782.13 ORF107314 - 0.11 12.3 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 DC-STAMP-like protein Peptidase_M22 PF00814.25 ORF106849 - 2.9e-39 135.4 0.0 3.3e-39 135.2 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family NMT PF01233.19 ORF105843 - 0.02 14.7 0.1 0.031 14.1 0.1 1.3 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain SelB-wing_1 PF09105.10 ORF105505 - 0.012 15.5 0.9 0.023 14.7 0.9 1.4 1 0 0 1 1 1 0 Elongation factor SelB, winged helix DUF281 PF03436.13 ORF105505 - 0.053 13.9 0.1 1.9 8.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF281) GSAP-16 PF14959.6 ORF105230 - 0.089 12.7 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 gamma-Secretase-activating protein C-term GAS PF13851.6 ORF10497 - 0.00033 20.1 24.1 0.00033 20.1 24.1 1.4 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF10497 - 0.0012 16.5 20.0 0.0013 16.4 20.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Fib_alpha PF08702.10 ORF10497 - 0.0057 16.8 16.2 0.0057 16.8 16.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family SlyX PF04102.12 ORF10497 - 0.046 14.4 13.9 0.29 11.8 3.1 2.6 1 1 1 2 2 2 0 SlyX DUF948 PF06103.11 ORF10497 - 0.1 12.9 1.5 0.19 12.0 1.3 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 ORF10497 - 0.12 11.6 18.9 0.043 13.1 16.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Atg14 PF10186.9 ORF10497 - 0.17 11.0 21.5 0.23 10.5 21.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF10497 - 0.18 10.7 23.6 0.21 10.4 23.1 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF10497 - 0.19 11.8 14.0 0.33 11.0 10.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Tnp_22_trimer PF17489.2 ORF10497 - 0.34 10.9 9.0 3.2 7.8 0.8 2.8 2 1 0 2 2 2 0 L1 transposable element trimerization domain UPF0242 PF06785.11 ORF10497 - 0.42 10.7 29.7 0.78 9.8 29.7 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Muted PF14942.6 ORF10497 - 0.47 10.8 25.8 0.14 12.5 22.0 1.9 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein AAA_13 PF13166.6 ORF10497 - 0.47 9.0 24.1 0.014 14.1 13.5 1.8 1 1 0 1 1 1 0 AAA domain HemX PF04375.14 ORF10497 - 0.72 9.1 16.3 0.12 11.7 12.3 1.7 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Cep57_MT_bd PF06657.13 ORF10497 - 0.77 10.3 20.1 0.16 12.4 6.7 3.3 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF4407 PF14362.6 ORF10497 - 1.3 8.4 15.1 1.4 8.2 15.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) IFT57 PF10498.9 ORF10497 - 1.6 7.6 24.1 0.21 10.5 19.3 1.7 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Nup88 PF10168.9 ORF10497 - 1.6 6.5 17.1 1.7 6.4 17.1 1.2 1 0 0 1 1 1 0 Nuclear pore component Laminin_II PF06009.12 ORF10497 - 1.7 8.7 17.4 1.7 8.6 12.2 2.1 1 1 1 2 2 2 0 Laminin Domain II Exonuc_VII_L PF02601.15 ORF10497 - 1.9 8.0 15.9 2 7.9 15.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_2 PF01920.20 ORF10497 - 4 7.4 28.6 0.48 10.4 8.3 3.4 1 1 1 2 2 2 0 Prefoldin subunit Malate_DH PF12434.8 ORF10497 - 4.9 7.3 6.9 31 4.7 0.7 3.2 2 1 1 3 3 3 0 Malate dehydrogenase enzyme Prefoldin PF02996.17 ORF10497 - 5.5 6.9 20.9 0.23 11.4 5.8 3.4 1 1 3 4 4 4 0 Prefoldin subunit Swi5 PF07061.11 ORF10497 - 6.5 6.9 21.2 1.5 9.0 5.3 3.1 2 1 1 3 3 3 0 Swi5 Tweety PF04906.13 ORF10497 - 8.3 5.0 8.9 6.8 5.2 2.3 2.0 1 1 1 2 2 2 0 Tweety Phage_GPO PF05929.11 ORF10497 - 8.3 5.9 15.2 17 4.9 15.2 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase V_ATPase_I PF01496.19 ORF10497 - 8.4 4.2 17.5 9.1 4.0 17.5 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MctB PF11382.8 ORF10497 - 10 5.8 11.2 1.6 8.4 4.0 2.1 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB MTHFR_C PF12225.8 ORF102923 - 0.18 11.5 3.4 0.11 12.1 1.2 1.8 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal RPW8 PF05659.11 ORF102439 - 0.001 18.8 1.1 0.0017 18.1 1.1 1.3 1 0 0 1 1 1 1 Arabidopsis broad-spectrum mildew resistance protein RPW8 HIP1_clath_bdg PF16515.5 ORF102439 - 0.0047 17.5 6.1 0.0084 16.7 6.1 1.5 1 0 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 Angiomotin_C PF12240.8 ORF102439 - 0.0081 15.7 0.7 0.0081 15.7 0.7 1.6 1 1 1 2 2 2 1 Angiomotin C terminal YojJ PF10372.9 ORF102439 - 0.071 13.2 0.9 0.18 11.9 0.6 1.8 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus FlaC_arch PF05377.11 ORF100187 - 0.028 14.8 10.1 0.12 12.7 0.8 2.7 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) CENP-K PF11802.8 ORF100187 - 0.031 13.9 16.8 0.03 13.9 16.1 1.3 1 1 0 1 1 1 0 Centromere-associated protein K DUF4071 PF13281.6 ORF100187 - 0.12 11.5 6.6 0.13 11.3 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4071) PL48 PF15903.5 ORF100187 - 0.13 11.2 9.4 0.15 11.0 9.4 1.1 1 0 0 1 1 1 0 Filopodia upregulated, FAM65 YtxH PF12732.7 ORF100187 - 0.3 11.7 3.4 1.4 9.5 3.4 2.1 1 1 0 1 1 1 0 YtxH-like protein DUF4407 PF14362.6 ORF100187 - 2.9 7.2 14.1 5.2 6.3 14.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Exonuc_VII_L PF02601.15 ORF100187 - 6.3 6.3 10.9 7.4 6.0 10.9 1.2 1 1 0 1 1 1 0 Exonuclease VII, large subunit EF-hand_1 PF00036.32 ORF100056 - 1e-32 109.2 19.3 1.8e-09 36.5 0.4 4.3 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF100056 - 1.7e-31 108.5 8.1 8.5e-16 58.2 1.2 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF100056 - 6.2e-28 94.3 10.3 1.3e-08 34.0 0.1 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF100056 - 1.6e-20 71.6 15.6 1.5e-06 27.4 0.3 4.3 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF100056 - 5.9e-18 64.5 15.3 9e-07 28.6 1.9 4.1 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF100056 - 2.4e-09 37.1 8.6 5.5e-05 23.1 0.1 3.1 1 1 2 3 3 3 3 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF100056 - 4.7e-09 36.6 2.4 0.0011 19.2 0.1 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF100056 - 1.1e-07 32.0 0.6 0.0022 18.3 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EFhand_Ca_insen PF08726.10 ORF100056 - 0.0017 18.4 0.7 0.0038 17.3 0.1 2.0 2 1 0 2 2 2 1 Ca2+ insensitive EF hand AAA_assoc_C PF09821.9 ORF100056 - 0.017 15.7 0.5 0.61 10.6 0.1 2.4 1 1 1 2 2 2 0 C-terminal AAA-associated domain Hemocyanin_N PF03722.14 ORF100056 - 0.028 14.9 0.4 0.062 13.8 0.2 1.6 2 0 0 2 2 2 0 Hemocyanin, all-alpha domain Caleosin PF05042.13 ORF100056 - 0.063 13.2 4.4 2.6 7.9 0.0 3.4 1 1 3 4 4 4 0 Caleosin related protein Virulence_fact PF13769.6 ORF100056 - 0.11 12.7 0.8 0.67 10.2 0.1 2.2 2 0 0 2 2 2 0 Virulence factor DUF3349 PF11829.8 ORF100056 - 0.13 13.1 0.3 0.63 10.8 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) zf-C2H2_11 PF16622.5 NODE_42433_length_478_cov_3.142212_g34821_i0forward_frame_1 - 0.025 14.4 2.9 0.025 14.4 2.9 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-C2H2 PF00096.26 NODE_42433_length_478_cov_3.142212_g34821_i0forward_frame_1 - 1.5 9.5 6.0 0.35 11.4 2.3 2.0 2 0 0 2 2 2 0 Zinc finger, C2H2 type DUF525 PF04379.14 NODE_42430_length_478_cov_4.943567_g34818_i0forward_frame_1 - 0.034 14.4 0.1 0.051 13.8 0.1 1.2 1 0 0 1 1 1 0 ApaG domain RCC1_2 PF13540.6 NODE_42409_length_478_cov_165.291196_g34797_i0forward_frame_1 - 0.00029 20.6 8.2 0.51 10.2 0.8 3.8 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat HTH_19 PF12844.7 NODE_42405_length_478_cov_371.945824_g2357_i3reverse_frame_1 - 0.12 12.4 0.3 0.6 10.2 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain ASC PF00858.24 NODE_42396_length_479_cov_2.146396_g34786_i0reverse_frame_1 - 0.019 13.9 2.5 0.02 13.9 2.5 1.0 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel MMTV_SAg PF01054.17 NODE_42394_length_479_cov_2.569820_g34784_i0reverse_frame_1 - 0.14 11.7 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen Oxidored_q6 PF01058.22 NODE_42392_length_479_cov_2.736486_g34782_i0reverse_frame_1 - 1.3e-22 80.1 0.2 1.6e-22 79.7 0.2 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit RVT_2 PF07727.14 NODE_42387_length_479_cov_4.236486_g34777_i0reverse_frame_1 - 1.5e-22 80.4 0.0 1.7e-22 80.2 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_1 PF00078.27 NODE_42387_length_479_cov_4.236486_g34777_i0reverse_frame_1 - 0.055 13.0 0.0 0.083 12.4 0.0 1.4 1 1 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) PlyB_C PF18684.1 NODE_42386_length_479_cov_6.137387_g34776_i0reverse_frame_1 - 0.0035 17.1 0.1 0.0055 16.4 0.1 1.3 1 1 0 1 1 1 1 Pleurotolysin B C-terminal domain ALMT PF11744.8 NODE_42386_length_479_cov_6.137387_g34776_i0reverse_frame_1 - 7.5 5.3 9.7 8.6 5.1 9.7 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF3533 PF12051.8 NODE_42386_length_479_cov_6.137387_g34776_i0reverse_frame_1 - 8.1 5.3 6.1 11 4.8 6.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3533) DnaJ-X PF14308.6 NODE_42380_length_479_cov_63.977477_g34770_i0forward_frame_1 - 0.085 12.3 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 X-domain of DnaJ-containing Peptidase_C74 PF12387.8 NODE_42373_length_479_cov_74.373874_g34763_i0reverse_frame_1 - 0.024 14.1 0.5 0.041 13.4 0.5 1.3 1 0 0 1 1 1 0 Pestivirus NS2 peptidase UspB PF10625.9 NODE_42368_length_479_cov_82.245495_g34758_i0forward_frame_1 - 0.13 12.3 2.1 0.18 11.8 2.1 1.2 1 0 0 1 1 1 0 Universal stress protein B (UspB) OmdA PF13376.6 NODE_42367_length_479_cov_86.995495_g34757_i0reverse_frame_1 - 0.018 15.0 0.8 0.18 11.8 0.0 2.2 2 0 0 2 2 2 0 Bacteriocin-protection, YdeI or OmpD-Associated DHC_N2 PF08393.13 NODE_42366_length_479_cov_92.536036_g34756_i0forward_frame_1 - 0.051 12.7 0.0 0.059 12.5 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 2 DUF2390 PF09523.10 NODE_42366_length_479_cov_92.536036_g34756_i0forward_frame_1 - 0.073 13.4 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2390) TNRC6-PABC_bdg PF16608.5 NODE_42354_length_479_cov_117.355856_g34744_i0reverse_frame_1 - 0.0034 17.1 0.4 0.0046 16.7 0.4 1.2 1 0 0 1 1 1 1 TNRC6-PABC binding domain Ank_5 PF13857.6 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 5e-25 87.2 0.1 2.4e-12 46.8 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 1.2e-23 83.1 0.1 2.4e-08 34.4 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 4.5e-20 72.0 1.0 2e-19 70.0 0.3 2.1 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 2.1e-17 62.7 0.2 1.2e-06 28.7 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 1.8e-13 49.3 0.1 6.5e-05 23.0 0.0 3.7 4 0 0 4 4 4 2 Ankyrin repeat SLC3A2_N PF16028.5 NODE_42321_length_479_cov_41971.173423_g30537_i10forward_frame_1 - 1.3 8.6 4.3 0.93 9.1 2.3 1.8 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus DUF3165 PF11364.8 NODE_42311_length_480_cov_4.251685_g34706_i0reverse_frame_1 - 0.031 14.6 0.3 0.094 13.1 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3165) Sid-5 PF17204.3 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_1 - 0.02 15.1 1.7 0.022 14.9 0.1 1.9 2 0 0 2 2 2 0 Sid-5 family DUF3408 PF11888.8 NODE_42304_length_480_cov_50.552809_g34699_i0forward_frame_1 - 0.064 13.4 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) Macoilin PF09726.9 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_1 - 5.5 5.4 15.4 6.3 5.2 15.4 1.0 1 0 0 1 1 1 0 Macoilin family UCH PF00443.29 NODE_42298_length_480_cov_80.802247_g34693_i0reverse_frame_1 - 3.5e-24 85.7 1.4 4.8e-24 85.3 1.4 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_42298_length_480_cov_80.802247_g34693_i0reverse_frame_1 - 0.00012 21.8 0.1 0.00016 21.4 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PPR_2 PF13041.6 NODE_42297_length_480_cov_84.865169_g34692_i0reverse_frame_1 - 0.034 14.3 0.3 0.21 11.8 0.1 2.2 2 0 0 2 2 2 0 PPR repeat family Vpu PF00558.19 NODE_42293_length_480_cov_98.712360_g34688_i0reverse_frame_1 - 0.0071 16.1 2.7 0.011 15.5 2.7 1.3 1 0 0 1 1 1 1 Vpu protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks135.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks135.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks135.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks135.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF390 PF04094.14 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 0.018 13.3 6.0 0.021 13.1 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) CAF-1_p150 PF11600.8 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 0.22 11.2 20.9 0.36 10.5 20.9 1.3 1 0 0 1 1 1 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal U79_P34 PF03064.16 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 0.73 9.1 14.9 0.94 8.8 14.9 1.4 1 0 0 1 1 1 0 HSV U79 / HCMV P34 GCD14 PF08704.10 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 2.2 7.9 5.5 3.3 7.3 5.5 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit EMC3_TMCO1 PF01956.16 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 4.9 6.9 5.0 6.7 6.4 5.0 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF2729 PF10870.8 NODE_42282_length_480_cov_239.741573_g34677_i0forward_frame_1 - 0.044 13.7 0.1 0.094 12.6 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2729) S1FA PF04689.13 NODE_42276_length_480_cov_510.894382_g34671_i0reverse_frame_1 - 0.016 15.3 3.8 0.031 14.4 3.8 1.5 1 0 0 1 1 1 0 DNA binding protein S1FA Erv26 PF04148.13 NODE_42276_length_480_cov_510.894382_g34671_i0forward_frame_1 - 0.013 15.3 11.0 0.016 15.0 10.9 1.2 1 1 0 1 1 1 0 Transmembrane adaptor Erv26 HipN PF18253.1 NODE_42275_length_480_cov_659.761798_g34670_i0reverse_frame_1 - 0.012 15.3 0.1 0.057 13.1 0.1 2.2 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain DUF787 PF05619.11 NODE_42268_length_481_cov_1.381166_g34664_i0reverse_frame_3 - 0.025 13.7 2.2 0.027 13.6 2.2 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF787) DUF1656 PF07869.12 NODE_42262_length_481_cov_2.161435_g34658_i0reverse_frame_3 - 1.8e-07 31.0 5.6 4e-07 29.9 5.6 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1656) Totivirus_coat PF05518.11 NODE_42258_length_481_cov_2.365471_g34654_i0reverse_frame_3 - 3.5 5.6 4.9 4.4 5.2 4.9 1.1 1 0 0 1 1 1 0 Totivirus coat protein Herpes_glycoH_C PF17488.2 NODE_42255_length_481_cov_2.665919_g34651_i0reverse_frame_2 - 0.00075 19.3 0.8 0.001 18.9 0.8 1.1 1 0 0 1 1 1 1 Herpesvirus glycoprotein H C-terminal domain DUF2024 PF09630.10 NODE_42255_length_481_cov_2.665919_g34651_i0reverse_frame_2 - 0.18 11.7 0.5 0.26 11.2 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) MFS_1 PF07690.16 NODE_42255_length_481_cov_2.665919_g34651_i0forward_frame_3 - 0.03 13.3 0.0 0.032 13.1 0.0 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily BPD_transp_1 PF00528.22 NODE_42254_length_481_cov_2.775785_g34650_i0reverse_frame_3 - 3.1e-22 79.2 14.0 3.7e-22 79.0 14.0 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component HEAT_2 PF13646.6 NODE_42252_length_481_cov_3.905830_g34648_i0reverse_frame_3 - 4.3e-11 43.1 0.0 2.6e-05 24.5 0.0 2.1 1 1 2 3 3 3 2 HEAT repeats HEAT_EZ PF13513.6 NODE_42252_length_481_cov_3.905830_g34648_i0reverse_frame_3 - 1.6e-08 34.9 0.0 0.00014 22.3 0.0 3.0 2 1 1 3 3 3 3 HEAT-like repeat HEAT PF02985.22 NODE_42252_length_481_cov_3.905830_g34648_i0reverse_frame_3 - 2.5e-07 30.4 0.0 7.9e-05 22.6 0.0 3.2 3 1 0 3 3 3 1 HEAT repeat Adaptin_N PF01602.20 NODE_42252_length_481_cov_3.905830_g34648_i0reverse_frame_3 - 2.7e-05 23.0 0.0 3.4e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 NODE_42252_length_481_cov_3.905830_g34648_i0reverse_frame_3 - 0.00019 21.6 0.0 0.00025 21.1 0.0 1.2 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 NODE_42252_length_481_cov_3.905830_g34648_i0reverse_frame_3 - 0.00029 21.4 0.0 0.0033 18.0 0.1 2.4 1 1 1 2 2 2 1 Vacuolar 14 Fab1-binding region DUF4834 PF16118.5 NODE_42249_length_481_cov_8.645740_g34645_i0reverse_frame_3 - 0.083 13.9 1.3 0.14 13.2 1.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) ATP-synt_8 PF00895.20 NODE_42249_length_481_cov_8.645740_g34645_i0reverse_frame_3 - 2.9 8.4 6.1 2.6 8.6 0.6 2.5 2 0 0 2 2 2 0 ATP synthase protein 8 L27_2 PF09045.10 NODE_42244_length_481_cov_56.390135_g34640_i0reverse_frame_3 - 0.49 10.4 1.5 13 5.9 0.1 2.8 3 0 0 3 3 3 0 L27_2 DUF1652 PF07865.11 NODE_42236_length_481_cov_83.789238_g34632_i0reverse_frame_3 - 0.085 12.7 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) DUF1298 PF06974.13 NODE_42236_length_481_cov_83.789238_g34632_i0forward_frame_2 - 1.1e-06 28.6 0.0 1.4e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) AbiEi_2 PF09952.9 NODE_42233_length_481_cov_120.154709_g34629_i0reverse_frame_3 - 0.11 12.7 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin, Type IV TA system bZIP_1 PF00170.21 NODE_42233_length_481_cov_120.154709_g34629_i0reverse_frame_2 - 0.031 14.4 2.0 0.031 14.4 2.0 2.4 2 0 0 2 2 2 0 bZIP transcription factor DUF148 PF02520.17 NODE_42233_length_481_cov_120.154709_g34629_i0reverse_frame_2 - 0.047 13.8 8.2 0.019 15.1 5.3 1.9 1 1 0 1 1 1 0 Domain of unknown function DUF148 SMN PF06003.12 NODE_42225_length_481_cov_153.008969_g32488_i1forward_frame_2 - 0.11 11.8 1.3 0.14 11.4 1.3 1.1 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) PRIMA1 PF16101.5 NODE_42225_length_481_cov_153.008969_g32488_i1forward_frame_2 - 0.54 10.3 6.4 0.81 9.7 6.4 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 RCC1_2 PF13540.6 NODE_42224_length_481_cov_158.659193_g34621_i0reverse_frame_2 - 3.7e-05 23.4 4.5 0.15 11.9 0.5 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_42224_length_481_cov_158.659193_g34621_i0reverse_frame_2 - 0.012 15.8 0.7 2.2 8.3 0.7 2.9 1 1 0 1 1 1 0 Uncharacterised ACR, YagE family COG1723 Crystall PF00030.19 NODE_42224_length_481_cov_158.659193_g34621_i0reverse_frame_2 - 0.032 14.4 0.1 1.3 9.3 0.0 2.1 1 1 1 2 2 2 0 Beta/Gamma crystallin Apo-CIII PF05778.12 NODE_42224_length_481_cov_158.659193_g34621_i0reverse_frame_2 - 0.2 11.3 1.3 8.5 6.1 0.0 2.6 3 0 0 3 3 3 0 Apolipoprotein CIII (Apo-CIII) Tropomyosin_1 PF12718.7 NODE_42214_length_481_cov_278.565022_g34611_i0forward_frame_3 - 0.0037 17.4 13.0 0.0037 17.4 13.0 1.6 1 1 1 2 2 2 1 Tropomyosin like FUSC-like PF12805.7 NODE_42214_length_481_cov_278.565022_g34611_i0forward_frame_3 - 0.64 9.1 5.2 0.76 8.8 5.2 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS HCMVantigenic_N PF12154.8 NODE_42213_length_481_cov_334.405830_g34610_i0reverse_frame_3 - 0.074 13.2 3.0 0.21 11.7 3.0 1.8 1 0 0 1 1 1 0 Glycoprotein B N-terminal antigenic domain of HCMV SUV3_C PF12513.8 NODE_42213_length_481_cov_334.405830_g34610_i0forward_frame_2 - 0.16 11.9 0.3 0.28 11.2 0.3 1.3 1 0 0 1 1 1 0 Mitochondrial degradasome RNA helicase subunit C terminal DUF5585 PF17823.1 NODE_42212_length_481_cov_354.872197_g34609_i0reverse_frame_3 - 0.37 9.7 19.8 0.43 9.5 19.8 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5585) zf-RanBP PF00641.18 NODE_42212_length_481_cov_354.872197_g34609_i0reverse_frame_2 - 1.3e-09 37.2 6.5 1.8e-09 36.7 6.5 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others zf-LITAF-like PF10601.9 NODE_42203_length_481_cov_1802.065022_g34601_i0forward_frame_2 - 0.042 14.1 5.8 0.056 13.7 5.8 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain NADHdh_A3 PF14987.6 NODE_42200_length_481_cov_41783.004484_g30537_i9forward_frame_2 - 0.02 15.2 0.0 0.03 14.6 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 MAS20 PF02064.15 NODE_42197_length_482_cov_1.498881_g34597_i0reverse_frame_2 - 0.044 13.9 1.4 0.06 13.4 1.4 1.2 1 0 0 1 1 1 0 MAS20 protein import receptor DUF272 PF03312.15 NODE_42191_length_482_cov_2.861298_g34591_i0reverse_frame_2 - 0.07 13.4 2.3 4.1 7.7 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF272) TMEM156 PF15106.6 NODE_42181_length_482_cov_68.749441_g34581_i0reverse_frame_3 - 0.0087 15.5 4.9 0.012 15.1 4.9 1.2 1 0 0 1 1 1 1 TMEM156 protein family SMRP1 PF15181.6 NODE_42181_length_482_cov_68.749441_g34581_i0reverse_frame_3 - 0.066 12.8 0.1 0.098 12.2 0.1 1.2 1 0 0 1 1 1 0 Spermatid-specific manchette-related protein 1 RNA_polI_A14 PF08203.11 NODE_42181_length_482_cov_68.749441_g34581_i0reverse_frame_3 - 0.56 11.0 5.1 0.28 11.9 1.2 2.0 1 1 1 2 2 2 0 Yeast RNA polymerase I subunit RPA14 CIAPIN1 PF05093.13 NODE_42172_length_482_cov_109.751678_g34572_i0forward_frame_2 - 2.4e-16 60.1 22.5 6.2e-11 42.7 5.8 2.8 2 1 1 3 3 3 2 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis IQCJ-SCHIP1 PF15157.6 NODE_42168_length_482_cov_136.335570_g34568_i0forward_frame_3 - 0.18 11.6 4.7 0.36 10.7 4.7 1.5 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif Glyco_hydro_71 PF03659.14 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_3 - 0.15 10.8 0.5 0.2 10.5 0.5 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 71 PDZ PF00595.24 NODE_42162_length_482_cov_255.391499_g34562_i0forward_frame_2 - 3.5e-05 24.1 0.0 5.9e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 NODE_42162_length_482_cov_255.391499_g34562_i0forward_frame_2 - 0.00056 20.2 0.0 0.00073 19.8 0.0 1.2 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 NODE_42162_length_482_cov_255.391499_g34562_i0forward_frame_2 - 0.0033 17.3 0.3 0.0064 16.3 0.3 1.5 1 0 0 1 1 1 1 PDZ domain PHD_4 PF16866.5 NODE_42158_length_482_cov_3147.176734_g34559_i0forward_frame_2 - 0.036 14.2 1.1 0.082 13.0 1.1 1.7 1 0 0 1 1 1 0 PHD-finger EF-hand_1 PF00036.32 NODE_42155_length_482_cov_13470.089485_g34556_i0reverse_frame_3 - 1.1e-05 24.6 0.1 2.2e-05 23.7 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_42155_length_482_cov_13470.089485_g34556_i0reverse_frame_3 - 0.001 18.8 0.0 0.0052 16.6 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 NODE_42155_length_482_cov_13470.089485_g34556_i0reverse_frame_3 - 0.0011 18.4 2.1 0.0014 18.1 0.2 2.1 2 1 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 NODE_42155_length_482_cov_13470.089485_g34556_i0reverse_frame_3 - 0.0013 19.1 0.1 0.0026 18.2 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_42155_length_482_cov_13470.089485_g34556_i0reverse_frame_2 - 0.0027 17.1 0.2 0.0045 16.5 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_42155_length_482_cov_13470.089485_g34556_i0reverse_frame_2 - 0.013 15.4 0.1 0.026 14.4 0.1 1.5 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_42155_length_482_cov_13470.089485_g34556_i0reverse_frame_2 - 0.063 13.7 0.0 0.093 13.2 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair CDC24_OB3 PF17244.2 NODE_42151_length_483_cov_2.254464_g34552_i0reverse_frame_2 - 0.061 13.0 3.9 0.079 12.7 3.7 1.4 1 1 0 1 1 1 0 Cell division control protein 24, OB domain 3 PIH1 PF08190.12 NODE_42145_length_483_cov_3.093750_g34546_i0reverse_frame_3 - 7.1e-28 97.2 0.1 1e-27 96.6 0.1 1.2 1 0 0 1 1 1 1 PIH1 N-terminal domain DUF1563 PF07599.11 NODE_42134_length_483_cov_64.379464_g34535_i0reverse_frame_3 - 0.56 10.3 11.1 0.36 11.0 5.9 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1563) Apocytochr_F_C PF01333.19 NODE_42127_length_483_cov_87.790179_g34528_i0reverse_frame_3 - 1.6 8.8 3.8 0.69 10.0 0.5 1.9 2 0 0 2 2 2 0 Apocytochrome F, C-terminal Benyvirus_14KDa PF07255.11 NODE_42127_length_483_cov_87.790179_g34528_i0reverse_frame_3 - 4.8 7.4 8.1 12 6.1 0.3 3.0 3 0 0 3 3 3 0 Benyvirus 14KDa protein EF-hand_7 PF13499.6 NODE_42127_length_483_cov_87.790179_g34528_i0reverse_frame_2 - 0.0002 21.8 0.1 0.092 13.2 0.0 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_42127_length_483_cov_87.790179_g34528_i0reverse_frame_2 - 0.0029 17.4 0.0 0.014 15.3 0.0 2.0 2 1 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 NODE_42127_length_483_cov_87.790179_g34528_i0reverse_frame_2 - 0.11 12.1 0.0 0.28 10.8 0.0 1.7 1 0 0 1 1 1 0 EF hand CARD_2 PF16739.5 NODE_42124_length_483_cov_93.716518_g34525_i0reverse_frame_2 - 0.1 12.6 0.2 0.18 11.8 0.2 1.3 1 0 0 1 1 1 0 Caspase recruitment domain DBC1 PF14443.6 NODE_42119_length_483_cov_104.857143_g34521_i0reverse_frame_3 - 0.6 10.1 2.7 0.59 10.1 0.2 2.0 2 0 0 2 2 2 0 DBC1 Cas_Cmr5 PF09701.10 NODE_42119_length_483_cov_104.857143_g34521_i0reverse_frame_2 - 0.076 13.3 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr5) PI-PLC-Y PF00387.19 NODE_42119_length_483_cov_104.857143_g34521_i0forward_frame_3 - 0.58 10.5 3.4 1 9.7 1.9 1.9 1 1 1 2 2 2 0 Phosphatidylinositol-specific phospholipase C, Y domain HTH_56 PF18662.1 NODE_42102_length_483_cov_190.926339_g34504_i0reverse_frame_2 - 0.1 12.7 0.1 0.18 11.9 0.1 1.4 1 0 0 1 1 1 0 Cch helix turn helix domain Pyr_redox_2 PF07992.14 NODE_42102_length_483_cov_190.926339_g34504_i0reverse_frame_2 - 0.13 11.4 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FANCI_HD1 PF14679.6 NODE_42099_length_483_cov_224.562500_g34501_i0reverse_frame_3 - 0.08 12.9 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 FANCI helical domain 1 TraI_2 PF07514.11 NODE_42099_length_483_cov_224.562500_g34501_i0reverse_frame_2 - 0.041 12.8 0.1 0.055 12.4 0.1 1.2 1 0 0 1 1 1 0 Putative helicase Ost5 PF05251.12 NODE_42098_length_483_cov_254.060268_g34500_i0forward_frame_2 - 0.059 13.6 4.7 0.17 12.2 0.8 2.2 2 0 0 2 2 2 0 Oligosaccharyltransferase subunit 5 TssO PF17561.2 NODE_42098_length_483_cov_254.060268_g34500_i0forward_frame_2 - 0.59 10.2 3.7 0.63 10.1 0.1 2.3 2 0 0 2 2 2 0 Type VI secretion system, TssO PsaM PF07465.13 NODE_42095_length_483_cov_307.002232_g34497_i0reverse_frame_3 - 0.079 12.7 1.6 0.16 11.7 1.6 1.5 1 0 0 1 1 1 0 Photosystem I protein M (PsaM) DUF4203 PF13886.6 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 1.4e-14 54.2 14.6 1.7e-14 54.0 14.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) DUF2207 PF09972.9 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.0066 15.3 2.2 0.0091 14.8 2.2 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) BatD PF13584.6 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.1 11.4 0.1 0.1 11.4 0.1 1.4 2 0 0 2 2 2 0 Oxygen tolerance DUF2530 PF10745.9 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.19 12.0 8.3 0.49 10.7 0.3 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2530) Lig_chan PF00060.26 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.29 10.9 2.4 0.44 10.4 0.1 2.1 2 0 0 2 2 2 0 Ligand-gated ion channel WBP-1 PF11669.8 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.35 11.5 0.1 0.35 11.5 0.1 1.9 2 0 0 2 2 2 0 WW domain-binding protein 1 TatC PF00902.18 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.49 10.2 8.8 1 9.1 0.6 2.0 1 1 1 2 2 2 0 Sec-independent protein translocase protein (TatC) Wzy_C PF04932.15 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.69 9.5 9.5 0.075 12.7 2.3 2.0 1 1 1 2 2 2 0 O-Antigen ligase DUF2518 PF10726.9 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 1.2 8.8 4.6 0.19 11.4 0.5 1.6 2 0 0 2 2 2 0 Protein of function (DUF2518) EphA2_TM PF14575.6 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 1.9 9.5 0.0 1.9 9.5 0.0 2.2 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Cadherin_C_2 PF16492.5 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 2.4 9.0 5.0 48 4.8 0.0 2.2 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal OAD_gamma PF04277.13 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 3.5 8.3 6.1 10 6.8 0.0 2.9 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain Phage_holin_3_6 PF07332.11 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 4.4 7.4 7.3 18 5.4 7.3 1.8 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3185 PF11381.8 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 4.9 7.3 10.5 0.1 12.6 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) FeoB_C PF07664.12 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 5.8 6.7 7.4 1.1 9.0 0.2 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus CDC50 PF03381.15 ORF98745 - 1.1e-11 44.8 0.0 1.3e-11 44.5 0.0 1.0 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Rubredoxin_2 PF18073.1 ORF98053 - 1.1 9.0 10.4 1.6 8.6 2.3 3.3 3 0 0 3 3 3 0 Rubredoxin metal binding domain Glycos_transf_1 PF00534.20 ORF96299 - 7.7e-18 64.6 0.0 9.5e-18 64.3 0.0 1.2 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF96299 - 8.2e-12 45.7 0.0 1.2e-11 45.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Big_5 PF13205.6 ORF9578 - 3.3e-10 40.6 0.0 6.8e-10 39.6 0.0 1.5 2 0 0 2 2 2 1 Bacterial Ig-like domain NYD-SP28 PF14772.6 ORF92559 - 0.00083 19.4 3.4 0.0011 18.9 2.9 1.5 1 1 0 1 1 1 1 Sperm tail PHD_like PF12910.7 ORF92559 - 0.01 15.8 0.1 0.016 15.2 0.1 1.4 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system Cas_Cas1 PF01867.16 ORF92559 - 0.062 12.4 1.2 0.077 12.1 1.2 1.1 1 0 0 1 1 1 0 CRISPR associated protein Cas1 Mt_ATP-synt_B PF05405.14 ORF92559 - 0.11 12.1 4.9 0.16 11.6 4.9 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF1700 PF08006.11 ORF92559 - 0.69 9.4 2.6 0.79 9.2 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) cNMP_binding PF00027.29 ORF91985 - 2.2e-06 27.6 0.0 0.00042 20.3 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain RNA_pol_Rpc82 PF05645.13 ORF91718 - 0.021 14.6 5.8 0.025 14.3 5.8 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 Vfa1 PF08432.10 ORF91718 - 0.046 14.0 11.5 0.059 13.7 11.5 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Pex14_N PF04695.13 ORF91718 - 0.088 13.5 2.8 0.12 13.1 2.8 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Ribosomal_L12_N PF16320.5 ORF91718 - 0.11 12.3 1.9 0.18 11.6 1.9 1.3 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain MFS_1 PF07690.16 ORF91438 - 0.00066 18.7 3.1 0.0042 16.1 4.5 1.5 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF91438 - 0.0022 16.6 5.2 0.0024 16.5 5.2 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Reticulon PF02453.17 ORF91438 - 0.022 14.7 3.3 0.2 11.6 0.9 2.1 1 1 1 2 2 2 0 Reticulon ATPase_gene1 PF09527.10 ORF91438 - 0.046 13.9 0.1 0.046 13.9 0.1 2.1 3 0 0 3 3 3 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Nop14 PF04147.12 ORF91070 - 0.54 8.4 27.6 0.66 8.1 27.6 1.0 1 0 0 1 1 1 0 Nop14-like family Menin PF05053.13 ORF91070 - 2.3 6.5 17.5 2.5 6.4 17.5 1.0 1 0 0 1 1 1 0 Menin YdiH PF15930.5 ORF90784 - 0.12 12.5 0.0 0.32 11.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function Hist_deacetyl PF00850.19 ORF88065 - 1.3e-17 64.2 0.0 1.6e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain RNA_pol_Rpc82 PF05645.13 ORF87689 - 0.021 14.6 5.8 0.025 14.3 5.8 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 Vfa1 PF08432.10 ORF87689 - 0.046 14.0 11.5 0.059 13.7 11.5 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Pex14_N PF04695.13 ORF87689 - 0.088 13.5 2.8 0.12 13.1 2.8 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Ribosomal_L12_N PF16320.5 ORF87689 - 0.11 12.3 1.9 0.18 11.6 1.9 1.3 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain UCH PF00443.29 ORF87037 - 5.1e-10 39.3 0.3 6.3e-10 39.0 0.3 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF87037 - 0.0022 17.6 0.3 0.0023 17.6 0.3 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF755 PF05501.11 ORF84242 - 0.0014 18.9 23.4 0.0014 18.9 23.4 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF755) TFIIF_alpha PF05793.12 ORF84242 - 0.02 13.5 18.8 0.022 13.4 18.8 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Pox_A12 PF04651.13 ORF84242 - 0.03 14.4 10.3 0.041 14.0 10.3 1.2 1 0 0 1 1 1 0 Poxvirus A12 protein PTPRCAP PF15713.5 ORF84242 - 0.044 14.1 7.5 0.067 13.5 7.5 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated XRCC4 PF06632.12 ORF84242 - 0.12 11.2 13.0 0.15 10.9 13.0 1.1 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 Spt5_N PF11942.8 ORF84242 - 0.18 12.8 7.2 0.28 12.2 7.2 1.3 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal Macoilin PF09726.9 ORF84242 - 0.27 9.7 10.8 0.33 9.5 10.8 1.2 1 0 0 1 1 1 0 Macoilin family CDC45 PF02724.14 ORF84242 - 0.37 9.0 14.7 0.43 8.8 14.7 1.0 1 0 0 1 1 1 0 CDC45-like protein GREB1 PF15782.5 ORF84242 - 0.41 7.7 5.4 0.39 7.8 5.4 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Menin PF05053.13 ORF84242 - 0.44 8.8 9.8 0.5 8.7 9.8 1.0 1 0 0 1 1 1 0 Menin Apt1 PF10351.9 ORF84242 - 0.6 8.9 12.3 0.64 8.8 12.3 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain LRIF1 PF15741.5 ORF84242 - 0.8 8.2 14.6 0.97 7.9 14.6 1.1 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 DUF4614 PF15391.6 ORF84242 - 1.1 9.2 14.1 1.4 8.8 14.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) RXT2_N PF08595.11 ORF84242 - 1.8 8.5 12.4 2.8 8.0 12.1 1.5 1 1 0 1 1 1 0 RXT2-like, N-terminal SOBP PF15279.6 ORF84242 - 2 8.9 8.1 2.4 8.7 8.1 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein ALMT PF11744.8 ORF84242 - 2.1 7.1 6.7 2.2 7.0 6.7 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter MDFI PF15316.6 ORF84242 - 2.8 8.0 8.4 4.1 7.5 8.4 1.4 1 0 0 1 1 1 0 MyoD family inhibitor DUF3807 PF12720.7 ORF84242 - 3.2 8.0 17.4 4.1 7.6 17.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Hid1 PF12722.7 ORF84242 - 3.5 5.6 9.1 3.9 5.5 9.1 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Presenilin PF01080.17 ORF84242 - 3.6 6.3 11.8 4.1 6.1 11.8 1.0 1 0 0 1 1 1 0 Presenilin SLC12 PF03522.15 ORF84242 - 4.4 6.2 10.5 5 6.0 10.5 1.0 1 0 0 1 1 1 0 Solute carrier family 12 SID-1_RNA_chan PF13965.6 ORF84242 - 4.8 5.5 4.9 4.8 5.5 4.9 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF3827 PF12877.7 ORF84242 - 5 5.4 17.1 5.9 5.1 17.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Neur_chan_memb PF02932.16 ORF84242 - 7.1 6.6 6.3 7.8 6.5 6.3 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region SAM_2 PF07647.17 ORF83165 - 0.0069 16.5 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Kinase-PolyVal PF18762.1 ORF83165 - 0.087 12.8 1.2 0.098 12.6 0.1 1.6 2 0 0 2 2 2 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins SAM_1 PF00536.30 ORF83165 - 0.1 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Choline_transpo PF04515.12 ORF82389 - 1.1e-26 93.8 11.5 1.3e-26 93.6 11.5 1.0 1 0 0 1 1 1 1 Plasma-membrane choline transporter SNAD4 PF18750.1 ORF82389 - 0.027 14.6 0.8 0.046 13.8 0.8 1.3 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 NAD1 PF18778.1 ORF82389 - 0.054 13.6 0.5 0.078 13.1 0.5 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 APOBEC4 PF18775.1 ORF82389 - 0.095 12.9 0.2 0.16 12.2 0.2 1.4 1 0 0 1 1 1 0 APOBEC4 ERGIC_N PF13850.6 ORF82389 - 0.72 10.2 3.8 0.5 10.7 1.2 2.0 1 1 1 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DOT1 PF08123.13 ORF82040 - 0.0058 16.2 0.0 0.015 14.9 0.0 1.6 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_25 PF13649.6 ORF82040 - 0.14 12.9 0.0 0.2 12.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 ORF82040 - 0.22 11.0 0.0 0.29 10.6 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase SAM_2 PF07647.17 ORF811 - 0.0069 16.5 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Kinase-PolyVal PF18762.1 ORF811 - 0.087 12.8 1.2 0.098 12.6 0.1 1.6 2 0 0 2 2 2 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins SAM_1 PF00536.30 ORF811 - 0.1 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) VPS13 PF16908.5 ORF80116 - 0.064 13.0 0.1 0.077 12.8 0.1 1.3 1 0 0 1 1 1 0 Vacuolar sorting-associated protein 13, N-terminal CENP-M PF11111.8 ORF80116 - 0.14 11.3 0.1 0.2 10.8 0.1 1.2 1 0 0 1 1 1 0 Centromere protein M (CENP-M) MFS_1 PF07690.16 ORF79870 - 0.009 15.0 9.8 0.017 14.0 9.8 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Prominin PF05478.11 ORF79870 - 0.085 10.8 1.2 0.1 10.5 1.2 1.2 1 0 0 1 1 1 0 Prominin DUF3382 PF11862.8 ORF79870 - 0.65 10.3 6.1 26 5.2 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3382) Skp1 PF01466.19 ORF77704 - 2.7e-26 91.4 2.6 5.5e-26 90.4 2.6 1.6 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF77704 - 5.6e-19 68.1 1.5 1.1e-18 67.2 1.5 1.5 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain XOO_2897-deam PF14440.6 ORF77526 - 0.15 12.1 0.1 0.24 11.5 0.1 1.3 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase zf-CCCH_7 PF18586.1 ORF77374 - 0.15 12.4 2.5 0.14 12.5 1.2 1.7 2 0 0 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 Keratin_2_head PF16208.5 ORF75433 - 9.2 6.4 15.9 16 5.6 15.2 1.9 1 1 0 1 1 1 0 Keratin type II head Bgal_small_N PF02929.17 ORF67136 - 2.3e-45 155.1 0.0 2.5e-45 155.0 0.0 1.0 1 0 0 1 1 1 1 Beta galactosidase small chain Herpes_UL49_2 PF04823.12 ORF66926 - 2.3 8.4 9.2 0.51 10.5 0.5 2.4 2 1 0 2 2 2 0 Herpesvirus UL49 tegument protein ABC2_membrane PF01061.24 ORF66452 - 2.4e-14 53.3 5.5 2.4e-14 53.3 5.5 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 ORF66452 - 0.02 14.2 1.9 0.021 14.1 1.9 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein Protein_K PF12283.8 ORF66452 - 0.081 13.2 0.1 0.15 12.3 0.1 1.5 1 0 0 1 1 1 0 Bacteriophage protein K ABC2_membrane_3 PF12698.7 ORF66452 - 9.5 5.2 16.0 32 3.5 16.0 1.8 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF1639 PF07797.14 ORF65657 - 0.045 13.7 1.9 0.2 11.7 1.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1639) GyrI-like PF06445.15 ORF64891 - 4.3e-31 108.3 0.0 4.7e-31 108.2 0.0 1.0 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 ORF64891 - 1.5e-07 31.6 0.0 1.7e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Integron-associated effector binding protein DUF5535 PF17687.1 ORF64331 - 0.049 13.8 0.0 0.1 12.8 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5535) EF-hand_1 PF00036.32 ORF63477 - 1.1e-26 90.3 11.2 6.4e-08 31.6 0.4 4.3 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF63477 - 4.2e-25 88.0 9.6 6e-12 45.9 2.2 2.6 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF63477 - 1.5e-22 77.5 6.6 2.8e-07 29.9 0.1 4.3 3 1 1 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF63477 - 2.2e-19 68.0 8.4 2.8e-08 32.9 0.2 4.6 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF63477 - 1.8e-17 62.9 6.6 5.5e-07 29.3 0.1 3.9 3 1 1 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF63477 - 3.1e-10 40.4 3.6 2e-05 24.8 1.4 2.2 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF63477 - 0.0007 19.5 5.2 0.044 13.7 0.2 2.3 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF63477 - 0.017 15.1 1.1 4 7.3 0.1 3.0 1 1 2 3 3 3 0 Caleosin related protein EF-hand_13 PF17958.1 ORF63477 - 0.078 12.8 0.0 2.7 7.9 0.0 2.9 1 1 1 3 3 3 0 EF-hand domain Fungal_lectin_2 PF18647.1 ORF63477 - 0.32 11.5 2.7 13 6.3 2.5 2.8 1 1 1 2 2 2 0 Alpha-galactosyl-binding fungal lectin ABC_tran PF00005.27 ORF63290 - 6.7e-17 62.3 0.0 1.1e-16 61.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF63290 - 3.5e-06 27.0 0.0 4.5e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF63290 - 4.5e-05 23.0 0.0 5.5e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF63290 - 0.013 15.7 0.2 0.29 11.4 0.2 2.4 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit CobU PF02283.16 ORF63290 - 0.028 14.0 0.0 0.035 13.7 0.0 1.2 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase TniB PF05621.11 ORF63290 - 0.052 13.0 0.0 0.074 12.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein Hormone_1 PF00103.20 ORF62860 - 0.48 10.1 5.8 0.81 9.4 5.8 1.5 1 1 0 1 1 1 0 Somatotropin hormone family Helicase_C PF00271.31 ORF62521 - 7.8e-05 23.0 0.0 0.00011 22.6 0.0 1.3 1 1 0 1 1 1 1 Helicase conserved C-terminal domain TB PF00683.17 ORF62521 - 0.032 14.0 2.9 0.039 13.7 0.8 1.9 2 0 0 2 2 2 0 TB domain TMEM100 PF16311.5 ORF62521 - 0.052 13.1 0.3 0.074 12.6 0.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 100 NPR3 PF03666.13 ORF61879 - 0.011 14.5 6.0 0.013 14.3 6.0 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF2618 PF10940.8 ORF60449 - 2.6 7.9 10.4 8.2 6.3 5.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) Reovirus_Mu2 PF07781.11 ORF5909 - 0.097 11.0 0.7 0.25 9.6 0.2 1.7 1 1 1 2 2 2 0 Reovirus minor core protein Mu-2 BCMA-Tall_bind PF09257.10 ORF58394 - 1.1 9.5 5.6 2.9 8.0 0.1 3.0 3 0 0 3 3 3 0 BCMA, TALL-1 binding MatP_C PF17414.2 ORF5734 - 0.53 10.5 4.5 20 5.5 0.1 2.7 2 0 0 2 2 2 0 MatP C-terminal ribbon-helix-helix domain DUF1002 PF06207.11 ORF5734 - 0.71 9.4 8.0 1.2 8.6 7.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1002) Cauli_DNA-bind PF03310.13 ORF5734 - 7.2 6.7 9.8 2.1 8.5 6.1 1.9 1 1 1 2 2 2 0 Caulimovirus DNA-binding protein DUF1970 PF09301.10 ORF57012 - 0.046 14.0 0.0 0.074 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1970) FYVE PF01363.21 ORF56556 - 6.2e-14 51.9 15.0 6.2e-14 51.9 15.0 1.5 2 0 0 2 2 2 1 FYVE zinc finger SCAMP PF04144.13 ORF562 - 0.055 13.8 0.4 0.069 13.4 0.4 1.2 1 0 0 1 1 1 0 SCAMP family OmpA PF00691.20 ORF56150 - 5e-19 68.5 0.1 7.1e-19 68.0 0.1 1.2 1 0 0 1 1 1 1 OmpA family Rubredoxin_2 PF18073.1 ORF55281 - 1.1 9.0 10.4 1.6 8.6 2.3 3.3 3 0 0 3 3 3 0 Rubredoxin metal binding domain zf-TFIIIC PF12660.7 ORF54780 - 0.015 15.2 2.6 0.51 10.3 0.2 2.5 2 0 0 2 2 2 0 Putative zinc-finger of transcription factor IIIC complex zf-C2HC5 PF06221.13 ORF54780 - 0.046 13.7 14.6 0.89 9.6 0.4 3.5 2 1 1 3 3 3 0 Putative zinc finger motif, C2HC5-type Hormone_1 PF00103.20 ORF52590 - 0.48 10.1 5.8 0.81 9.4 5.8 1.5 1 1 0 1 1 1 0 Somatotropin hormone family Aldo_ket_red PF00248.21 ORF52377 - 4.2e-28 98.4 0.1 4.8e-28 98.2 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family YflT PF11181.8 ORF52377 - 0.018 15.5 0.0 0.032 14.8 0.0 1.4 1 0 0 1 1 1 0 Heat induced stress protein YflT ABC_tran PF00005.27 ORF49396 - 4.9e-06 27.1 0.0 5.9e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter Cas_Cas1 PF01867.16 ORF48446 - 0.01 15.0 0.5 0.012 14.8 0.5 1.1 1 0 0 1 1 1 0 CRISPR associated protein Cas1 DUF3782 PF12644.7 ORF48446 - 0.24 11.6 2.5 2.4 8.4 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3782) Calpain_III PF01067.22 ORF42469 - 4.6e-16 59.3 0.0 6.6e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Calpain large subunit, domain III IclR PF01614.18 ORF42369 - 4.8e-13 49.1 0.0 6.6e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Bacterial transcriptional regulator GAF PF01590.26 ORF42369 - 5.7e-05 23.8 0.0 6.9e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 ORF42369 - 6.3e-05 23.3 0.0 8.8e-05 22.8 0.0 1.3 1 1 0 1 1 1 1 GAF domain GAF_3 PF13492.6 ORF42369 - 0.0021 18.4 0.0 0.0027 18.0 0.0 1.2 1 0 0 1 1 1 1 GAF domain adh_short_C2 PF13561.6 ORF42286 - 1.7e-26 93.3 0.0 2e-26 93.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF42286 - 1e-10 41.4 0.0 1.3e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Acetyltransf_6 PF13480.7 ORF39209 - 0.0016 18.6 0.3 0.0029 17.8 0.3 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain WD40 PF00400.32 ORF38258 - 1.6e-15 57.2 0.2 3.9e-06 27.5 0.0 3.7 4 0 0 4 4 4 3 WD domain, G-beta repeat Cas_Cas1 PF01867.16 ORF38185 - 0.003 16.7 0.6 0.0034 16.6 0.6 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 TRAF_BIRC3_bd PF16673.5 ORF38185 - 0.045 13.6 0.9 0.13 12.0 0.9 1.9 1 0 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain Rpr2 PF04032.16 ORF38185 - 0.054 13.8 0.1 0.12 12.7 0.1 1.6 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain NYD-SP28 PF14772.6 ORF38185 - 0.16 12.0 7.0 0.12 12.4 5.7 1.6 1 1 0 1 1 1 0 Sperm tail ubiquitin PF00240.23 ORF3818 - 1.5e-13 50.2 0.0 2.4e-06 27.2 0.1 2.3 2 0 0 2 2 2 2 Ubiquitin family Ubiquitin_4 PF18036.1 ORF3818 - 0.0098 15.9 0.3 1.3 9.1 0.4 2.8 2 1 0 2 2 2 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 ORF3818 - 0.012 16.1 0.0 0.75 10.3 0.0 2.6 3 0 0 3 3 3 0 Ubiquitin-like domain Rad60-SLD PF11976.8 ORF3818 - 0.019 14.8 0.0 0.72 9.7 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-2 like Rad60 SUMO-like p450 PF00067.22 ORF37777 - 8.5e-30 103.9 0.0 9.2e-30 103.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF4113 PF13438.6 ORF37404 - 2.5e-22 78.7 0.2 5.7e-22 77.5 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4113) IMS_C PF11799.8 ORF37404 - 9.3e-11 42.5 0.0 1.3e-10 42.0 0.0 1.2 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain Sedlin_N PF04628.13 ORF37043 - 0.034 14.3 2.4 0.097 12.8 2.3 1.8 1 1 0 1 1 1 0 Sedlin, N-terminal conserved region zf-B_box PF00643.24 ORF37043 - 3 8.1 10.8 1.3 9.3 8.3 1.7 2 0 0 2 2 2 0 B-box zinc finger Foie-gras_1 PF11817.8 ORF36238 - 0.094 12.3 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Foie gras liver health family 1 Ribosomal_S17 PF00366.20 ORF35071 - 5.7e-25 87.2 0.1 1.2e-24 86.2 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 ORF35071 - 7.9e-25 87.0 1.2 1.4e-24 86.3 1.2 1.4 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal Carla_C4 PF01623.17 ORF35071 - 0.049 13.6 0.4 0.076 13.0 0.4 1.4 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein GATase_4 PF13230.6 ORF34891 - 0.11 11.4 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferases class-II zf-RING_2 PF13639.6 ORF3478 - 6e-13 48.9 7.4 1.4e-12 47.7 7.4 1.7 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF3478 - 1.9e-08 34.5 4.6 4.1e-08 33.4 4.6 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF3478 - 5.8e-08 32.6 3.8 1.2e-07 31.6 3.8 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF3478 - 9.3e-07 28.6 6.5 2.1e-06 27.4 6.5 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF3478 - 1.1e-06 28.3 6.1 2.4e-06 27.2 6.1 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF3478 - 1.9e-06 27.7 6.2 1.9e-06 27.7 6.2 1.9 2 0 0 2 2 2 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF3478 - 6e-06 26.2 2.7 1.2e-05 25.3 2.7 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF3478 - 6.6e-06 25.9 6.0 1.3e-05 25.0 6.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF3478 - 3.5e-05 23.6 5.2 7.7e-05 22.5 5.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF3478 - 8.6e-05 22.1 5.9 0.00019 21.0 5.9 1.6 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF3478 - 0.00014 21.6 5.9 0.00029 20.6 5.9 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 TadE PF07811.12 ORF3478 - 0.0061 16.8 0.3 2.1 8.7 0.0 2.3 2 0 0 2 2 2 1 TadE-like protein Zf_RING PF16744.5 ORF3478 - 0.008 16.3 2.5 0.017 15.3 2.5 1.5 1 0 0 1 1 1 1 KIAA1045 RING finger zf-C3HC4_4 PF15227.6 ORF3478 - 0.025 14.7 9.6 0.18 12.0 8.7 2.5 1 1 2 3 3 3 0 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF3478 - 0.084 12.9 0.4 0.14 12.2 0.4 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-Nse PF11789.8 ORF3478 - 0.11 12.3 1.8 0.23 11.3 1.5 1.8 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit RINGv PF12906.7 ORF3478 - 0.16 12.1 6.1 0.51 10.5 6.0 1.9 1 1 0 1 1 1 0 RING-variant domain Rtf2 PF04641.12 ORF3478 - 0.95 8.8 5.1 6.2 6.1 1.0 2.0 1 1 1 2 2 2 0 Rtf2 RING-finger FANCL_C PF11793.8 ORF3478 - 0.95 9.7 9.6 9.8 6.4 9.6 2.6 1 1 0 1 1 1 0 FANCL C-terminal domain HemY_N PF07219.13 ORF34123 - 0.051 13.8 0.3 0.13 12.5 0.1 1.7 2 0 0 2 2 2 0 HemY protein N-terminus N_methyl PF07963.12 ORF34123 - 0.39 10.4 4.2 0.57 9.8 0.3 2.7 3 0 0 3 3 3 0 Prokaryotic N-terminal methylation motif NAF PF03822.14 ORF33768 - 0.032 14.4 1.3 1.1 9.5 0.1 3.0 2 1 1 3 3 3 0 NAF domain zf-C2H2 PF00096.26 ORF33448 - 1.2e-11 44.4 10.8 2e-06 27.9 3.0 2.7 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF33448 - 1.6e-09 37.7 3.8 1.6e-09 37.7 3.8 3.7 3 1 0 3 3 3 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF33448 - 2e-08 34.4 8.0 6.3e-05 23.5 1.7 3.0 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF33448 - 3.9e-05 23.5 8.6 0.053 13.5 1.5 3.8 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF33448 - 8.7e-05 22.8 2.1 8.7e-05 22.8 2.1 1.5 2 0 0 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_jaz PF12171.8 ORF33448 - 0.0091 16.3 4.9 0.035 14.4 0.6 3.0 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF33448 - 0.03 14.7 0.8 0.03 14.7 0.8 3.0 4 0 0 4 4 4 0 Zinc-finger of C2H2 type zf-BED PF02892.15 ORF33448 - 0.035 14.1 4.1 0.035 14.1 4.1 2.5 2 1 1 3 3 3 0 BED zinc finger zf_ZIC PF18366.1 ORF33448 - 0.05 13.7 3.8 4.9 7.3 0.8 2.5 1 1 1 2 2 2 0 Zic proteins zinc finger domain zf-H2C2_5 PF13909.6 ORF33448 - 3.3 7.5 13.9 0.25 11.1 5.2 3.0 3 1 0 3 3 3 0 C2H2-type zinc-finger domain Pkinase PF00069.25 ORF32542 - 9.4e-17 61.2 1.7 2.6e-16 59.8 1.7 1.6 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF32542 - 4.8e-12 45.7 0.8 5.1e-12 45.6 0.8 1.2 1 1 0 1 1 1 1 Protein tyrosine kinase CRT-like PF08627.10 ORF32370 - 0.00085 18.4 1.2 0.0011 18.0 1.2 1.2 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like DUF533 PF04391.12 ORF31025 - 0.045 13.3 1.5 0.054 13.1 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF533) HhH-GPD PF00730.25 ORF29336 - 1.1e-07 32.2 0.0 1.6e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH_2 PF12826.7 ORF29336 - 0.001 19.1 0.0 0.73 10.0 0.0 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH PF00633.23 ORF29336 - 0.0025 17.6 0.0 0.008 16.0 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 ORF29336 - 0.13 12.8 0.2 2.4 8.8 0.0 2.6 2 1 0 2 2 2 0 Helix-hairpin-helix domain Cpn60_TCP1 PF00118.24 ORF28194 - 1.9e-28 99.4 0.7 2.1e-28 99.2 0.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF2870 PF11069.8 ORF28194 - 0.15 12.5 0.0 0.23 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2870) DUF4820 PF16091.5 ORF26667 - 0.037 13.4 6.4 0.049 13.0 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) NUDIX PF00293.28 ORF24790 - 8.3e-19 67.9 0.0 1e-18 67.7 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain Abhydrolase_2 PF02230.16 ORF24286 - 1e-08 35.3 0.0 1.2e-08 35.1 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_5 PF12695.7 ORF24286 - 0.0036 17.1 0.0 0.0045 16.8 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.7 ORF24286 - 0.2 12.2 1.1 0.27 11.8 1.1 1.3 1 1 0 1 1 1 0 Alpha/beta hydrolase family MFS_1 PF07690.16 ORF23564 - 1.1e-11 44.2 15.5 1.3e-11 44.1 15.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_3 PF05977.13 ORF23564 - 0.0064 14.9 3.7 0.0074 14.7 3.7 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector NAD1 PF18778.1 ORF23564 - 0.17 11.9 0.4 0.26 11.4 0.4 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 Fzo_mitofusin PF04799.13 ORF23564 - 0.23 11.0 0.3 0.36 10.4 0.3 1.2 1 0 0 1 1 1 0 fzo-like conserved region Minor_capsid_2 PF11114.8 ORF21749 - 0.022 14.8 0.0 0.031 14.3 0.0 1.2 1 0 0 1 1 1 0 Minor capsid protein Pkinase PF00069.25 ORF20197 - 6.7e-17 61.7 1.3 1.9e-16 60.3 1.3 1.6 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF20197 - 4.9e-12 45.7 0.7 5.1e-12 45.6 0.7 1.2 1 1 0 1 1 1 1 Protein tyrosine kinase Nucleo_P87 PF07267.11 ORF16009 - 0.0073 15.2 0.2 0.0079 15.1 0.2 1.0 1 0 0 1 1 1 1 Nucleopolyhedrovirus capsid protein P87 DUF3730 PF12530.8 ORF16009 - 0.035 13.7 0.0 0.041 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3730) KH_7 PF17214.3 ORF16009 - 0.17 11.9 0.1 0.27 11.2 0.1 1.3 1 0 0 1 1 1 0 KH domain bZIP_1 PF00170.21 ORF15781 - 8.4e-07 29.0 8.4 2.3e-06 27.6 8.4 1.7 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF15781 - 8.2e-05 22.6 8.0 8.2e-05 22.6 8.0 1.8 2 1 0 2 2 2 1 Basic region leucine zipper RusA PF05866.11 ORF15781 - 0.26 11.9 4.8 0.34 11.5 4.8 1.2 1 0 0 1 1 1 0 Endodeoxyribonuclease RusA BRI3BP PF14965.6 ORF15781 - 0.3 10.6 0.4 0.56 9.7 0.4 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 FapA PF03961.13 ORF15781 - 0.39 9.3 6.6 0.49 8.9 6.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Rpr2 PF04032.16 ORF1544 - 0.11 12.8 0.1 0.24 11.7 0.1 1.6 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DrrA_P4M PF14860.6 ORF1544 - 0.25 11.2 8.1 2.8 7.9 1.8 2.3 1 1 1 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain Mt_ATP-synt_B PF05405.14 ORF1544 - 0.58 9.8 6.7 1.5 8.4 6.6 1.8 1 1 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Alg14 PF08660.11 ORF14826 - 2.9e-50 170.6 0.0 3.3e-50 170.4 0.0 1.0 1 0 0 1 1 1 1 Oligosaccharide biosynthesis protein Alg14 like DUF553 PF04473.12 ORF13542 - 0.69 9.4 6.3 0.093 12.3 1.2 1.8 1 1 1 2 2 2 0 Transglutaminase-like domain RNA_pol_Rpb5_C PF01191.19 ORF13431 - 0.053 13.4 0.0 0.084 12.8 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb5, C-terminal domain BUD22 PF09073.10 ORF12909 - 0.00057 19.4 33.6 0.00067 19.1 33.6 1.0 1 0 0 1 1 1 1 BUD22 Nop14 PF04147.12 ORF12909 - 4.6 5.3 41.4 5.8 5.0 41.4 1.0 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 ORF12909 - 5.2 6.4 38.9 7.8 5.8 38.9 1.2 1 0 0 1 1 1 0 SDA1 YebF PF13995.6 ORF12725 - 0.046 13.7 0.7 0.93 9.5 0.1 2.3 2 0 0 2 2 2 0 YebF-like protein Flu_M2 PF00599.17 ORF12725 - 0.12 12.5 0.2 0.24 11.5 0.2 1.5 1 0 0 1 1 1 0 Influenza Matrix protein (M2) SMAP PF15477.6 ORF12725 - 0.22 12.5 1.7 1.1 10.2 1.6 2.1 1 1 0 1 1 1 0 Small acidic protein family HTH_19 PF12844.7 ORF112023 - 0.0013 18.7 0.0 0.0027 17.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 ORF112023 - 0.0028 18.0 0.0 0.0041 17.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 ORF112023 - 0.032 14.1 0.0 0.056 13.3 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_3 PF01381.22 ORF112023 - 0.047 13.8 0.0 0.1 12.7 0.0 1.6 1 1 0 1 1 1 0 Helix-turn-helix HTH_37 PF13744.6 ORF112023 - 0.09 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain EPO_TPO PF00758.18 ORF111182 - 0.08 13.0 0.3 0.12 12.4 0.2 1.4 2 0 0 2 2 2 0 Erythropoietin/thrombopoietin Sin3_corepress PF08295.12 ORF109926 - 0.029 14.4 3.9 0.071 13.2 2.1 2.1 1 1 1 2 2 2 0 Sin3 family co-repressor Cys_rich_FGFR PF00839.17 ORF109926 - 0.03 14.5 0.4 0.052 13.7 0.4 1.4 1 0 0 1 1 1 0 Cysteine rich repeat NUDIX PF00293.28 ORF109910 - 1.4e-17 63.9 0.3 1.7e-17 63.7 0.3 1.1 1 0 0 1 1 1 1 NUDIX domain LRR_6 PF13516.6 ORF107842 - 2.5e-09 36.4 1.9 0.0012 18.7 0.0 4.2 4 0 0 4 4 4 2 Leucine Rich repeat HOASN PF14515.6 ORF107842 - 0.056 13.8 0.4 0.33 11.4 0.1 2.3 1 1 2 3 3 3 0 Haem-oxygenase-associated N-terminal helices bZIP_1 PF00170.21 ORF107767 - 8.4e-07 29.0 8.4 2.3e-06 27.6 8.4 1.7 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF107767 - 8.2e-05 22.6 8.0 8.2e-05 22.6 8.0 1.8 2 1 0 2 2 2 1 Basic region leucine zipper RusA PF05866.11 ORF107767 - 0.26 11.9 4.8 0.34 11.5 4.8 1.2 1 0 0 1 1 1 0 Endodeoxyribonuclease RusA BRI3BP PF14965.6 ORF107767 - 0.3 10.6 0.4 0.56 9.7 0.4 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 FapA PF03961.13 ORF107767 - 0.39 9.3 6.6 0.49 8.9 6.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Aldedh PF00171.22 ORF106884 - 6.3e-37 127.2 0.1 7e-37 127.0 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Ribosomal_L33 PF00471.20 ORF103724 - 1.2e-12 48.1 0.0 1.7e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L33 Glycos_transf_1 PF00534.20 ORF103632 - 7.7e-18 64.6 0.0 9.5e-18 64.3 0.0 1.2 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF103632 - 8.2e-12 45.7 0.0 1.2e-11 45.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Fer2 PF00111.27 ORF103253 - 1.5e-12 47.3 2.8 2.3e-12 46.7 2.8 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 ORF103253 - 0.41 10.7 2.8 1.6 8.9 1.8 2.4 2 1 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Aa_trans PF01490.18 ORF102835 - 8.9e-16 57.6 4.4 1.2e-15 57.2 4.4 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF2627 PF11118.8 ORF102835 - 4.1 8.0 8.3 3 8.5 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) Peptidase_M10_C PF08548.11 ORF102402 - 0.69 9.8 9.5 1.6 8.6 4.5 2.1 1 1 1 2 2 2 0 Peptidase M10 serralysin C terminal TC1 PF15063.6 ORF101424 - 0.053 13.4 0.1 0.098 12.5 0.1 1.4 1 0 0 1 1 1 0 Thyroid cancer protein 1 Pro_3_hydrox_C PF05373.11 ORF101424 - 0.075 13.1 0.2 0.15 12.2 0.2 1.6 1 1 0 1 1 1 0 L-proline 3-hydroxylase, C-terminal Ank_2 PF12796.7 ORF100384 - 2.1e-05 25.0 0.0 3e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF100384 - 6.8e-05 23.0 0.0 0.059 14.0 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF100384 - 0.00016 22.2 0.0 0.00043 20.8 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (many copies) ubiquitin PF00240.23 ORF100384 - 0.0015 18.3 0.0 0.0027 17.4 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family Ank PF00023.30 ORF100384 - 0.011 16.2 0.0 0.025 15.0 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeat TetR_C_11 PF16859.5 ORF100384 - 0.11 12.8 1.3 5.3 7.4 0.3 2.2 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Ank_5 PF13857.6 ORF100384 - 0.11 12.8 0.0 9.2 6.7 0.0 2.3 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Vel1p PF10339.9 NODE_42634_length_475_cov_2.075000_g35011_i0reverse_frame_1 - 0.034 13.5 0.0 0.064 12.6 0.0 1.4 1 0 0 1 1 1 0 Yeast-specific zinc responsive Syntaxin-6_N PF09177.11 NODE_42631_length_475_cov_2.509091_g35008_i0reverse_frame_1 - 0.14 12.7 0.2 0.27 11.8 0.2 1.6 1 1 0 1 1 1 0 Syntaxin 6, N-terminal TCR PF03638.15 NODE_42627_length_475_cov_3.015909_g35004_i0forward_frame_1 - 2e-13 50.4 22.6 3.2e-13 49.8 22.6 1.3 1 0 0 1 1 1 1 Tesmin/TSO1-like CXC domain, cysteine-rich domain preSET_CXC PF18264.1 NODE_42627_length_475_cov_3.015909_g35004_i0forward_frame_1 - 2.1 8.9 19.2 3.7 8.1 19.2 1.4 1 0 0 1 1 1 0 CXC domain DUF4560 PF15118.6 NODE_42625_length_475_cov_3.538636_g35002_i0forward_frame_1 - 0.0017 18.2 0.1 0.003 17.4 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4560) LysR_substrate PF03466.20 NODE_42624_length_475_cov_3.547727_g35001_i0reverse_frame_1 - 1.2e-06 28.1 0.0 1.3e-06 27.9 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks136.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks136.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks136.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks136.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YlqD PF11068.8 NODE_42613_length_475_cov_74.475000_g34990_i0reverse_frame_1 - 0.05 14.0 5.0 0.14 12.5 2.5 2.0 1 1 1 2 2 2 0 YlqD protein SVM_signal PF12113.8 NODE_42613_length_475_cov_74.475000_g34990_i0forward_frame_1 - 0.18 11.7 0.5 0.18 11.7 0.5 2.4 2 0 0 2 2 2 0 SVM protein signal sequence Cadherin_tail PF15974.5 NODE_42612_length_475_cov_78.727273_g34989_i0forward_frame_1 - 0.0082 16.5 0.1 0.013 15.8 0.1 1.3 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region DUF4040 PF13244.6 NODE_42609_length_475_cov_97.979545_g34986_i0reverse_frame_1 - 0.074 13.2 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4040) Ribosomal_L39 PF00832.20 NODE_42604_length_475_cov_114.736364_g34981_i0reverse_frame_1 - 3.7 7.3 6.4 0.7 9.6 0.5 2.2 2 0 0 2 2 2 0 Ribosomal L39 protein Phage_holin_7_1 PF16081.5 NODE_42604_length_475_cov_114.736364_g34981_i0forward_frame_1 - 0.023 14.8 2.2 0.026 14.7 1.3 1.5 1 1 0 1 1 1 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family TM140 PF14985.6 NODE_42580_length_475_cov_3134.336364_g34904_i1forward_frame_1 - 0.056 13.0 0.1 0.072 12.6 0.1 1.2 1 0 0 1 1 1 0 TM140 protein family LRR_6 PF13516.6 NODE_42573_length_476_cov_2.174603_g34955_i0reverse_frame_1 - 6.5e-13 47.6 6.8 0.0075 16.2 0.0 4.5 4 0 0 4 4 4 4 Leucine Rich repeat LRR_4 PF12799.7 NODE_42573_length_476_cov_2.174603_g34955_i0reverse_frame_1 - 3.2e-07 30.6 13.9 0.0013 19.1 3.7 2.8 2 1 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_42573_length_476_cov_2.174603_g34955_i0reverse_frame_1 - 0.00017 21.7 9.3 2.4 9.0 0.1 4.5 4 0 0 4 4 4 2 Leucine Rich Repeat LRR_8 PF13855.6 NODE_42573_length_476_cov_2.174603_g34955_i0reverse_frame_1 - 0.026 14.3 15.4 0.13 12.1 2.2 3.6 2 2 0 2 2 2 0 Leucine rich repeat DUF1201 PF06716.11 NODE_42567_length_476_cov_2.580499_g34949_i0forward_frame_1 - 0.1 12.6 0.3 0.17 12.0 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1201) DUF1631 PF07793.11 NODE_42565_length_476_cov_2.825397_g34947_i0reverse_frame_1 - 0.19 10.1 1.1 0.23 9.8 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) CDC27 PF09507.10 NODE_42565_length_476_cov_2.825397_g34947_i0reverse_frame_1 - 2.4 7.5 18.5 2.7 7.3 18.5 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 MetJ PF01340.20 NODE_42539_length_476_cov_178.176871_g34921_i0reverse_frame_1 - 0.097 12.7 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Met Apo-repressor, MetJ TM140 PF14985.6 NODE_42519_length_476_cov_3127.278912_g34904_i0forward_frame_1 - 0.056 13.0 0.1 0.072 12.6 0.1 1.2 1 0 0 1 1 1 0 TM140 protein family DXP_redisom_C PF08436.12 NODE_42516_length_476_cov_26974.766440_g34902_i0forward_frame_1 - 0.12 12.5 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Imm70 PF15601.6 NODE_42511_length_477_cov_2.323529_g34897_i0reverse_frame_1 - 0.1 12.2 0.1 0.17 11.4 0.0 1.4 2 0 0 2 2 2 0 Immunity protein 70 BMC PF00936.19 NODE_42504_length_477_cov_3.407240_g34890_i0forward_frame_1 - 6.7e-16 58.1 0.7 1.5e-11 44.1 0.6 2.2 2 0 0 2 2 2 2 BMC domain EAL PF00563.20 NODE_42503_length_477_cov_3.619910_g34889_i0reverse_frame_1 - 4.6e-37 127.8 0.2 5e-37 127.7 0.2 1.0 1 0 0 1 1 1 1 EAL domain Phospholip_A2_3 PF09056.11 NODE_42503_length_477_cov_3.619910_g34889_i0reverse_frame_1 - 0.15 12.7 0.0 0.22 12.2 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic phospholipase A2 UPF0564 PF10595.9 NODE_42500_length_477_cov_4.357466_g34886_i0reverse_frame_1 - 4.1e-07 29.4 15.0 5.4e-07 29.0 15.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0564 Pkinase PF00069.25 NODE_42490_length_477_cov_60.837104_g34876_i0reverse_frame_1 - 3.6e-14 52.8 0.0 5.6e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_42490_length_477_cov_60.837104_g34876_i0reverse_frame_1 - 4.1e-11 42.7 0.0 6e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2238 PF09997.9 NODE_42489_length_477_cov_61.923077_g34875_i0forward_frame_1 - 0.18 11.6 5.4 0.07 12.9 1.2 2.0 1 1 0 2 2 2 0 Predicted membrane protein (DUF2238) Tenui_PVC2 PF06656.11 NODE_42488_length_477_cov_69.450226_g34874_i0forward_frame_1 - 0.58 8.0 5.0 0.67 7.8 5.0 1.1 1 0 0 1 1 1 0 Tenuivirus PVC2 protein Na_H_antiport_1 PF06965.12 NODE_42483_length_477_cov_77.131222_g34869_i0forward_frame_1 - 4.5e-17 62.0 4.1 5.3e-17 61.7 4.1 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 Prenyltrans PF00432.21 NODE_42478_length_477_cov_89.013575_g34864_i0reverse_frame_1 - 2.2 8.1 4.7 7.7 6.3 1.0 2.6 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat DDE_5 PF13546.6 NODE_42475_length_477_cov_101.572398_g34861_i0reverse_frame_1 - 0.013 14.8 0.7 0.016 14.6 0.7 1.0 1 0 0 1 1 1 0 DDE superfamily endonuclease CRAL_TRIO PF00650.20 NODE_42463_length_477_cov_159.497738_g34849_i0forward_frame_1 - 6.7e-15 55.1 0.9 8.2e-15 54.9 0.9 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 NODE_42463_length_477_cov_159.497738_g34849_i0forward_frame_1 - 0.0074 16.5 0.2 0.0095 16.1 0.2 1.2 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DAGAT PF03982.13 NODE_42452_length_477_cov_467.497738_g34839_i0forward_frame_1 - 0.14 11.0 0.1 0.2 10.5 0.1 1.2 1 0 0 1 1 1 0 Diacylglycerol acyltransferase Ras PF00071.22 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 1.3e-54 184.2 0.4 1.4e-54 184.0 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 4.2e-36 123.8 0.3 5.1e-36 123.5 0.3 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 3.3e-17 62.5 0.2 3.9e-17 62.2 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 3.1e-08 33.7 0.2 3.9e-08 33.4 0.2 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 1.3e-05 24.7 0.1 1.6e-05 24.4 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.00039 19.9 0.0 0.00052 19.5 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.00099 18.7 0.3 0.0021 17.6 0.1 1.5 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.001 19.0 1.0 0.013 15.4 0.2 2.2 1 1 1 2 2 2 1 RsgA GTPase FeoB_N PF02421.18 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.0095 15.5 0.0 0.016 14.7 0.0 1.4 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_16 PF13191.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.015 15.7 0.1 0.018 15.4 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.015 15.0 0.0 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.019 15.0 0.0 0.04 13.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.021 14.5 0.4 0.05 13.3 0.4 1.8 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.049 13.9 0.0 0.36 11.1 0.0 2.0 1 1 1 2 2 2 0 AAA domain ABC_tran PF00005.27 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.066 13.7 0.4 0.094 13.2 0.4 1.5 1 1 0 1 1 1 0 ABC transporter PduV-EutP PF10662.9 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.076 12.8 0.1 0.57 9.9 0.0 1.9 1 1 1 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_25 PF13481.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.11 12.0 0.0 0.14 11.7 0.0 1.3 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.12 12.8 0.0 0.18 12.2 0.0 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CART PF06373.11 NODE_42440_length_478_cov_2.139955_g34828_i0reverse_frame_2 - 0.034 14.3 0.3 0.061 13.5 0.3 1.4 1 0 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) Sugarporin_N PF11471.8 NODE_42438_length_478_cov_2.722348_g34826_i0reverse_frame_2 - 2.3e-14 53.1 6.2 3.7e-14 52.4 6.2 1.4 1 0 0 1 1 1 1 Maltoporin periplasmic N-terminal extension Tropomyosin PF00261.20 NODE_42438_length_478_cov_2.722348_g34826_i0reverse_frame_2 - 0.0012 18.3 1.5 0.0015 17.9 1.5 1.0 1 0 0 1 1 1 1 Tropomyosin DUF4752 PF15944.5 NODE_42435_length_478_cov_2.905192_g34823_i0reverse_frame_3 - 0.12 12.4 0.1 0.27 11.3 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) FAA_hydro_N_2 PF18288.1 NODE_42435_length_478_cov_2.905192_g34823_i0reverse_frame_2 - 0.047 14.1 0.1 0.67 10.4 0.1 2.2 1 1 0 1 1 1 0 Fumarylacetoacetase N-terminal domain 2 MFS_4 PF06779.14 NODE_42435_length_478_cov_2.905192_g34823_i0forward_frame_3 - 1e-52 179.6 10.4 1.1e-52 179.5 10.4 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1 PF07690.16 NODE_42435_length_478_cov_2.905192_g34823_i0forward_frame_3 - 9.7e-07 28.0 13.5 1.4e-06 27.5 13.5 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1615 PF07759.12 NODE_42431_length_478_cov_3.711061_g34819_i0forward_frame_2 - 4.5e-37 128.0 0.1 5.4e-37 127.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1615) LPAM_1 PF08139.12 NODE_42431_length_478_cov_3.711061_g34819_i0forward_frame_2 - 2.1 9.0 4.5 4.2 8.0 4.5 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF2203 PF09969.9 NODE_42425_length_478_cov_63.941309_g34813_i0forward_frame_2 - 0.8 10.4 8.1 0.26 12.0 1.0 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) LRAT PF04970.13 NODE_42422_length_478_cov_65.413093_g34810_i0reverse_frame_2 - 0.0041 17.4 0.0 0.007 16.7 0.0 1.4 1 0 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 NODE_42422_length_478_cov_65.413093_g34810_i0reverse_frame_2 - 0.022 14.6 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 PPPDE putative peptidase domain Rrn6 PF10214.9 NODE_42417_length_478_cov_93.695260_g34805_i0forward_frame_3 - 0.24 9.9 0.4 0.24 9.8 0.4 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Mito_carr PF00153.27 NODE_42414_length_478_cov_102.033860_g34802_i0forward_frame_2 - 7.2e-25 86.8 3.3 1.3e-14 53.8 0.2 2.2 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF4589 PF15252.6 NODE_42409_length_478_cov_165.291196_g34797_i0reverse_frame_3 - 0.1 12.6 0.3 0.12 12.3 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) CtsR PF05848.11 NODE_42409_length_478_cov_165.291196_g34797_i0forward_frame_2 - 0.0061 16.5 0.3 4.3 7.3 0.0 2.6 3 0 0 3 3 3 2 CtsR N-terminal HTH domain DUF4501 PF14946.6 NODE_42406_length_478_cov_211.634312_g34794_i0forward_frame_2 - 5.4 7.1 8.0 1.5 8.8 2.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4501) DUF2405 PF10293.9 NODE_42405_length_478_cov_371.945824_g2357_i3reverse_frame_2 - 0.011 15.7 0.3 0.017 15.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2405) zf-C2H2_3rep PF18868.1 NODE_42400_length_479_cov_1.036036_g34790_i0forward_frame_3 - 0.16 12.6 0.3 0.91 10.2 0.1 1.9 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats TMEM40 PF15817.5 NODE_42398_length_479_cov_1.900901_g34788_i0reverse_frame_2 - 1.6 8.5 6.1 0.89 9.3 1.5 2.2 1 1 1 2 2 2 0 Transmembrane protein 40 family Tn7_TnsC_Int PF11426.8 NODE_42398_length_479_cov_1.900901_g34788_i0forward_frame_3 - 0.056 13.6 0.1 0.13 12.5 0.1 1.6 1 0 0 1 1 1 0 Tn7 transposition regulator TnsC KELK PF15796.5 NODE_42398_length_479_cov_1.900901_g34788_i0forward_frame_2 - 0.014 15.8 1.0 0.014 15.8 1.0 2.3 2 1 1 3 3 3 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Fer4_14 PF13394.6 NODE_42398_length_479_cov_1.900901_g34788_i0forward_frame_2 - 0.35 11.0 3.1 2 8.6 0.3 2.3 2 1 0 2 2 2 0 4Fe-4S single cluster domain RseA_C PF03873.13 NODE_42398_length_479_cov_1.900901_g34788_i0forward_frame_2 - 0.69 10.2 3.0 16 5.8 0.0 2.3 2 0 0 2 2 2 0 Anti sigma-E protein RseA, C-terminal domain Gp_dh_C PF02800.20 NODE_42396_length_479_cov_2.146396_g34786_i0forward_frame_2 - 1.3e-21 76.8 0.9 2.7e-21 75.8 0.0 1.9 3 0 0 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 NODE_42396_length_479_cov_2.146396_g34786_i0forward_frame_2 - 7.5e-12 45.5 0.1 2.9e-11 43.6 0.0 1.8 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PAS_5 PF07310.13 NODE_42392_length_479_cov_2.736486_g34782_i0forward_frame_2 - 0.15 11.9 0.3 0.22 11.3 0.3 1.2 1 0 0 1 1 1 0 PAS domain DUF4942 PF13708.6 NODE_42390_length_479_cov_3.074324_g34780_i0reverse_frame_3 - 1e-44 152.9 0.2 1.1e-44 152.8 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4942) Phage_integrase PF00589.22 NODE_42388_length_479_cov_3.466216_g34778_i0reverse_frame_3 - 6.9e-20 71.5 0.0 8.6e-20 71.2 0.0 1.1 1 0 0 1 1 1 1 Phage integrase family HNH_2 PF13391.6 NODE_42386_length_479_cov_6.137387_g34776_i0reverse_frame_3 - 0.042 14.0 0.8 0.066 13.4 0.8 1.4 1 1 0 1 1 1 0 HNH endonuclease Striatin PF08232.12 NODE_42386_length_479_cov_6.137387_g34776_i0reverse_frame_2 - 0.35 11.5 3.4 0.66 10.6 3.4 1.4 1 1 0 1 1 1 0 Striatin family DUF1206 PF06724.11 NODE_42386_length_479_cov_6.137387_g34776_i0forward_frame_2 - 0.23 11.6 2.9 0.44 10.6 2.9 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) Med11 PF10280.9 NODE_42385_length_479_cov_8.711712_g34775_i0forward_frame_3 - 0.085 13.3 0.6 0.1 13.0 0.6 1.4 1 1 0 1 1 1 0 Mediator complex protein Gsf2 PF11055.8 NODE_42376_length_479_cov_72.376126_g34766_i0reverse_frame_3 - 0.0024 16.7 0.8 0.0029 16.4 0.8 1.2 1 0 0 1 1 1 1 Glucose signalling factor 2 SHIPPO-rpt PF07004.12 NODE_42375_length_479_cov_72.828829_g34765_i0forward_frame_3 - 0.0028 18.5 11.8 1.7 9.7 0.6 3.9 3 1 0 3 3 3 3 Sperm-tail PG-rich repeat ECR1_N PF14382.6 NODE_42375_length_479_cov_72.828829_g34765_i0forward_frame_3 - 0.035 13.9 0.0 1.8 8.4 0.0 2.3 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region MFS_1 PF07690.16 NODE_42373_length_479_cov_74.373874_g34763_i0reverse_frame_3 - 0.0014 17.6 9.0 0.002 17.1 9.0 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily Wzy_C PF04932.15 NODE_42369_length_479_cov_81.860360_g34759_i0forward_frame_2 - 0.13 11.9 0.8 0.13 11.9 0.8 1.1 1 0 0 1 1 1 0 O-Antigen ligase AgrB PF04647.15 NODE_42368_length_479_cov_82.245495_g34758_i0reverse_frame_3 - 0.32 10.3 9.7 0.21 10.9 8.3 1.4 1 1 0 1 1 1 0 Accessory gene regulator B DUF1053 PF06327.14 NODE_42368_length_479_cov_82.245495_g34758_i0forward_frame_2 - 0.009 16.5 1.5 0.01 16.4 0.3 1.6 2 0 0 2 2 2 1 Domain of Unknown Function (DUF1053) Tetraspanin PF00335.20 NODE_42368_length_479_cov_82.245495_g34758_i0forward_frame_2 - 0.19 11.4 0.3 0.27 10.9 0.3 1.2 1 0 0 1 1 1 0 Tetraspanin family Imm6 PF14434.6 NODE_42367_length_479_cov_86.995495_g34757_i0reverse_frame_3 - 0.018 15.0 1.1 0.22 11.4 0.2 2.2 1 1 0 2 2 2 0 Immunity protein Imm6 Phage_int_SAM_4 PF13495.6 NODE_42367_length_479_cov_86.995495_g34757_i0reverse_frame_3 - 0.058 13.9 0.2 0.21 12.1 0.1 2.1 2 1 1 3 3 3 0 Phage integrase, N-terminal SAM-like domain Olduvai PF06758.13 NODE_42353_length_479_cov_121.628378_g34743_i0forward_frame_2 - 0.029 14.6 0.6 0.053 13.8 0.6 1.4 1 0 0 1 1 1 0 Olduvai domain IFT57 PF10498.9 NODE_42350_length_479_cov_128.191441_g34741_i0forward_frame_3 - 0.039 12.9 0.9 0.049 12.6 0.9 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Med4 PF10018.9 NODE_42350_length_479_cov_128.191441_g34741_i0forward_frame_3 - 0.59 9.8 4.5 1.3 8.7 3.7 1.8 2 1 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Glyco_hydro_6 PF01341.17 NODE_42345_length_479_cov_171.540541_g34736_i0forward_frame_2 - 0.16 11.7 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 6 Cortex-I_coil PF09304.10 NODE_42340_length_479_cov_231.952703_g34731_i0reverse_frame_3 - 0.0046 17.1 1.1 2.9 8.1 0.2 2.2 2 0 0 2 2 2 2 Cortexillin I, coiled coil Exo5 PF09810.9 NODE_42340_length_479_cov_231.952703_g34731_i0reverse_frame_3 - 0.009 15.5 4.1 0.01 15.4 4.1 1.0 1 0 0 1 1 1 1 Exonuclease V - a 5' deoxyribonuclease DNA_ligase_A_C PF04679.15 NODE_42340_length_479_cov_231.952703_g34731_i0reverse_frame_2 - 1.5e-22 80.1 0.0 2e-22 79.6 0.0 1.2 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region DNA_ligase_OB_2 PF14743.6 NODE_42340_length_479_cov_231.952703_g34731_i0reverse_frame_2 - 0.035 14.1 0.0 3.8 7.6 0.0 2.3 2 0 0 2 2 2 0 DNA ligase OB-like domain DUF3397 PF11877.8 NODE_42328_length_479_cov_2663.139640_g33990_i1reverse_frame_3 - 0.12 12.6 16.9 0.14 12.3 15.7 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3397) PsbH PF00737.20 NODE_42328_length_479_cov_2663.139640_g33990_i1reverse_frame_3 - 0.51 10.1 3.0 0.94 9.3 3.0 1.4 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein TFIID_20kDa PF03847.13 NODE_42328_length_479_cov_2663.139640_g33990_i1forward_frame_3 - 2.5e-12 47.1 0.2 4.2e-12 46.4 0.2 1.4 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Histone PF00125.24 NODE_42328_length_479_cov_2663.139640_g33990_i1forward_frame_3 - 0.00072 19.9 0.5 0.0015 18.9 0.0 1.8 2 0 0 2 2 2 1 Core histone H2A/H2B/H3/H4 MCM_lid PF17855.1 NODE_42328_length_479_cov_2663.139640_g33990_i1forward_frame_3 - 0.016 15.6 0.0 0.037 14.4 0.0 1.6 1 0 0 1 1 1 0 MCM AAA-lid domain NADHdh_A3 PF14987.6 NODE_42321_length_479_cov_41971.173423_g30537_i10reverse_frame_2 - 0.02 15.2 0.0 0.029 14.7 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 Spc7 PF08317.11 NODE_42320_length_480_cov_1.669663_g34715_i0reverse_frame_2 - 0.0093 14.9 2.3 0.012 14.5 2.3 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein LANC_like PF05147.13 NODE_42320_length_480_cov_1.669663_g34715_i0reverse_frame_2 - 0.02 13.5 0.7 0.025 13.2 0.7 1.0 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein PARM PF17061.5 NODE_42319_length_480_cov_1.806742_g34714_i0reverse_frame_2 - 2 8.5 3.1 3.2 7.8 3.1 1.2 1 0 0 1 1 1 0 PARM DUF4834 PF16118.5 NODE_42317_length_480_cov_1.883146_g34712_i0forward_frame_3 - 0.00066 20.6 1.0 0.0012 19.7 1.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) FAM176 PF14851.6 NODE_42317_length_480_cov_1.883146_g34712_i0forward_frame_3 - 0.013 15.2 0.7 0.019 14.6 0.1 1.5 1 1 1 2 2 2 0 FAM176 family V_ATPase_I PF01496.19 NODE_42317_length_480_cov_1.883146_g34712_i0forward_frame_3 - 0.016 13.1 0.1 0.019 12.9 0.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family EphA2_TM PF14575.6 NODE_42317_length_480_cov_1.883146_g34712_i0forward_frame_3 - 0.018 15.9 0.5 0.046 14.6 0.5 1.8 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF4083 PF13314.6 NODE_42317_length_480_cov_1.883146_g34712_i0forward_frame_3 - 0.17 11.9 0.3 0.17 11.9 0.3 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4083) Phage_term_smal PF05944.12 NODE_42316_length_480_cov_1.925843_g34711_i0reverse_frame_3 - 0.15 12.0 0.4 0.61 10.1 0.1 1.9 1 1 1 2 2 2 0 Phage small terminase subunit PhoLip_ATPase_C PF16212.5 NODE_42316_length_480_cov_1.925843_g34711_i0reverse_frame_2 - 2e-25 90.0 11.1 2.4e-25 89.8 11.1 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal MukE PF04288.13 NODE_42314_length_480_cov_2.811236_g34709_i0forward_frame_3 - 2.2e-97 324.5 0.7 2.4e-97 324.4 0.7 1.0 1 0 0 1 1 1 1 MukE-like family DUF4194 PF13835.6 NODE_42314_length_480_cov_2.811236_g34709_i0forward_frame_3 - 0.00055 19.7 0.7 0.0038 17.0 0.7 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4194) Tfb2 PF03849.14 NODE_42314_length_480_cov_2.811236_g34709_i0forward_frame_3 - 0.023 13.7 0.0 0.028 13.4 0.0 1.1 1 0 0 1 1 1 0 Transcription factor Tfb2 AAA_16 PF13191.6 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 4.1e-06 27.3 0.0 4.9e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.00072 20.0 0.0 0.0011 19.3 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Myosin_head PF00063.21 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.001 17.4 0.0 0.0011 17.3 0.0 1.1 1 0 0 1 1 1 1 Myosin head (motor domain) NTPase_1 PF03266.15 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.0015 18.5 0.2 0.004 17.1 0.1 1.7 2 0 0 2 2 2 1 NTPase AAA_19 PF13245.6 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.0034 17.7 0.1 0.0051 17.2 0.1 1.2 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.0042 17.0 0.0 0.0064 16.4 0.0 1.3 1 0 0 1 1 1 1 NACHT domain Sigma54_activat PF00158.26 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.0051 16.5 0.0 0.0078 15.9 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_22 PF13401.6 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.0055 17.0 0.0 0.0073 16.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.0062 16.4 0.0 0.0073 16.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.0082 15.9 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.011 16.3 0.0 0.015 15.8 0.0 1.4 1 0 0 1 1 1 0 ABC transporter RsgA_GTPase PF03193.16 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.012 15.5 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase PhoH PF02562.16 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.021 14.3 0.0 0.026 14.0 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein T2SSE PF00437.20 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.027 13.5 0.0 0.031 13.4 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein MeaB PF03308.16 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.03 13.3 0.0 0.044 12.8 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NB-ARC PF00931.22 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.031 13.5 0.0 0.037 13.2 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain DUF2075 PF09848.9 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.031 13.5 0.0 0.042 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DnaB_C PF03796.15 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.031 13.6 0.0 0.045 13.1 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain KAP_NTPase PF07693.14 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.032 13.5 0.0 0.043 13.1 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain AAA_24 PF13479.6 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.034 13.9 0.0 0.042 13.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.10 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.035 13.6 0.0 0.052 13.0 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 ResIII PF04851.15 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.044 13.8 0.0 0.063 13.3 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit ATPase_2 PF01637.18 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.055 13.4 0.0 0.074 13.0 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.06 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TsaE PF02367.17 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.062 13.3 0.0 0.088 12.8 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.063 13.7 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.075 12.5 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Sigma54_activ_2 PF14532.6 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_3 - 0.084 13.0 0.0 0.25 11.5 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain PhnA_Zn_Ribbon PF08274.12 NODE_42311_length_480_cov_4.251685_g34706_i0forward_frame_2 - 0.22 11.5 1.8 9.8 6.2 1.0 2.6 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Pkinase PF00069.25 NODE_42309_length_480_cov_9.620225_g34704_i0reverse_frame_2 - 3.8e-28 98.6 0.1 4.4e-28 98.4 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_42309_length_480_cov_9.620225_g34704_i0reverse_frame_2 - 5.9e-19 68.4 0.0 7.3e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase fragilysinNterm PF16376.5 NODE_42309_length_480_cov_9.620225_g34704_i0reverse_frame_2 - 0.029 14.1 0.7 0.066 13.0 0.7 1.7 1 1 0 1 1 1 0 N-terminal domain of fragilysin ABC1 PF03109.16 NODE_42309_length_480_cov_9.620225_g34704_i0reverse_frame_2 - 0.066 13.4 0.0 0.09 13.0 0.0 1.2 1 0 0 1 1 1 0 ABC1 family PgaD PF13994.6 NODE_42309_length_480_cov_9.620225_g34704_i0forward_frame_3 - 0.088 12.9 0.2 0.17 12.0 0.2 1.5 1 0 0 1 1 1 0 PgaD-like protein TERB2 PF15101.6 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 0.088 12.9 6.6 0.12 12.5 6.6 1.1 1 0 0 1 1 1 0 Telomere-associated protein TERB2 Z1 PF10593.9 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 0.34 10.4 5.9 0.38 10.2 5.9 1.1 1 0 0 1 1 1 0 Z1 domain PMSI1 PF15322.6 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 0.36 10.2 4.4 0.51 9.7 4.4 1.1 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative MAJIN PF15077.6 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 0.86 9.3 6.2 1.2 8.9 6.2 1.1 1 0 0 1 1 1 0 Membrane-anchored junction protein DUF4519 PF15012.6 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 1 9.6 5.4 3.2 8.0 5.4 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) DNA_pol_phi PF04931.13 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 1.6 6.8 20.1 1.8 6.5 20.1 1.0 1 0 0 1 1 1 0 DNA polymerase phi FAM60A PF15396.6 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 1.9 8.4 7.4 2.1 8.3 7.4 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Presenilin PF01080.17 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 2.8 6.6 8.3 2.8 6.6 8.3 1.1 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 3.5 6.8 5.0 3.8 6.6 5.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Neur_chan_memb PF02932.16 NODE_42308_length_480_cov_11.433708_g34703_i0forward_frame_3 - 3.8 7.5 5.2 4.5 7.3 5.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region NOT2_3_5 PF04153.18 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_2 - 0.061 13.4 3.1 0.04 14.0 1.2 1.6 1 1 1 2 2 2 0 NOT2 / NOT3 / NOT5 family Glyco_tran_WbsX PF14307.6 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_2 - 0.076 12.5 5.0 0.081 12.4 5.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase WbsX Phage_min_cap2 PF06152.11 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_2 - 0.22 10.4 6.3 0.29 10.0 6.3 1.1 1 0 0 1 1 1 0 Phage minor capsid protein 2 Nup54 PF13874.6 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_2 - 2.9 8.0 9.5 0.18 11.9 2.8 2.0 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 CM2 PF03021.14 NODE_42298_length_480_cov_80.802247_g34693_i0reverse_frame_2 - 0.029 14.2 0.7 0.037 13.9 0.7 1.3 1 0 0 1 1 1 0 Influenza C virus M2 protein MafB19-deam PF14437.6 NODE_42296_length_480_cov_94.561798_g34691_i0reverse_frame_3 - 0.15 11.9 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 MafB19-like deaminase LNS2 PF08235.13 NODE_42293_length_480_cov_98.712360_g34688_i0reverse_frame_2 - 2.8e-09 36.8 0.0 3.9e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 LNS2 (Lipin/Ned1/Smp2) Fer4_11 PF13247.6 NODE_42288_length_480_cov_117.274157_g34683_i0forward_frame_2 - 0.069 13.3 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain YniB PF14002.6 NODE_42273_length_480_cov_788.907865_g34668_i0reverse_frame_2 - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 YniB-like protein adh_short PF00106.25 ORF99074 - 4.5e-12 45.8 0.0 6.2e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF99074 - 1.4e-09 37.9 0.1 2.2e-09 37.3 0.1 1.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase EF-hand_1 PF00036.32 ORF98939 - 1e-16 59.2 0.0 0.00057 19.2 0.0 4.5 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF98939 - 4.2e-15 54.3 0.7 0.0012 18.6 0.0 4.8 5 0 0 5 5 5 4 EF-hand domain EF-hand_7 PF13499.6 ORF98939 - 5.5e-15 55.6 0.8 5.5e-07 30.0 0.0 2.6 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF98939 - 1.5e-08 33.7 0.4 0.0026 17.2 0.1 3.5 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF98939 - 2.8e-05 23.9 0.8 0.98 9.3 0.0 4.4 3 1 2 5 5 5 3 EF-hand domain pair DUF3567 PF12091.8 ORF98939 - 0.008 16.3 0.1 0.014 15.5 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3567) Alpha-E PF04168.12 ORF98354 - 0.0073 16.1 0.2 0.0088 15.9 0.2 1.2 1 0 0 1 1 1 1 A predicted alpha-helical domain with a conserved ER motif. Exonuc_VII_L PF02601.15 ORF98354 - 0.022 14.3 6.6 0.024 14.2 6.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit ATP11 PF06644.11 ORF98354 - 0.043 13.6 12.2 0.055 13.3 12.2 1.1 1 0 0 1 1 1 0 ATP11 protein Mer2 PF09074.10 ORF98354 - 0.045 13.5 11.9 0.067 13.0 11.9 1.3 1 0 0 1 1 1 0 Mer2 DUF4407 PF14362.6 ORF98354 - 0.079 12.3 5.6 0.099 12.0 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AbiH PF14253.6 ORF98354 - 0.086 12.7 6.0 0.11 12.3 6.0 1.3 1 0 0 1 1 1 0 Bacteriophage abortive infection AbiH S4 PF01479.25 ORF98354 - 0.1 12.3 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 S4 domain Allexi_40kDa PF05549.11 ORF98354 - 0.2 11.2 3.2 0.25 10.8 3.2 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein XRN_M PF17846.1 ORF98354 - 0.22 10.4 10.6 0.25 10.3 10.6 1.0 1 0 0 1 1 1 0 Xrn1 helical domain Acylphosphatase PF00708.18 ORF98354 - 0.35 11.3 6.4 9.5 6.7 5.8 2.5 1 1 1 2 2 2 0 Acylphosphatase GvpL_GvpF PF06386.11 ORF98354 - 0.37 10.7 6.1 0.5 10.3 6.1 1.2 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF Pox_A_type_inc PF04508.12 ORF98354 - 0.62 10.0 0.0 0.62 10.0 0.0 2.9 3 0 0 3 3 2 0 Viral A-type inclusion protein repeat DUF99 PF01949.16 ORF98354 - 0.66 9.4 3.6 1.2 8.5 2.5 1.6 1 1 0 1 1 1 0 Protein of unknown function DUF99 Ureide_permease PF07168.11 ORF98354 - 1.2 7.8 4.4 1.4 7.6 4.4 1.1 1 0 0 1 1 1 0 Ureide permease DUF1081 PF06448.11 ORF98354 - 1.3 9.5 5.5 4.2 7.8 3.7 2.2 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1081) DUF883 PF05957.13 ORF98354 - 1.6 9.4 10.0 1.6 9.4 8.8 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) DUF1104 PF06518.11 ORF98354 - 2.2 8.7 20.2 1.3 9.5 18.3 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1104) UPF0242 PF06785.11 ORF98354 - 2.4 8.2 18.5 3.1 7.9 18.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMPIT PF07851.13 ORF98354 - 4.6 6.4 12.7 6.1 6.0 12.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF3752 PF12572.8 ORF98354 - 4.9 7.7 14.1 18 5.9 14.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3752) Vfa1 PF08432.10 ORF98354 - 5.1 7.4 19.4 6.5 7.1 19.4 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF948 PF06103.11 ORF98354 - 5.4 7.3 9.7 13 6.1 3.8 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) PNPase PF03726.14 ORF98354 - 8.6 6.9 16.2 4.7 7.8 4.7 2.8 1 1 1 2 2 2 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain LMBR1 PF04791.16 ORF98354 - 9.7 5.0 6.5 11 4.8 6.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4256 PF14066.6 ORF97793 - 0.16 11.7 0.4 0.25 11.0 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) XhlA PF10779.9 ORF97793 - 8.2 6.7 6.6 12 6.2 1.8 2.3 2 0 0 2 2 2 0 Haemolysin XhlA GidB PF02527.15 ORF9773 - 4e-55 186.0 0.0 4.7e-55 185.8 0.0 1.0 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_31 PF13847.6 ORF9773 - 1.4e-05 24.9 0.0 1.5e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF9773 - 0.00032 21.4 0.0 0.00046 20.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF9773 - 0.023 14.3 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase small domain AAA_15 PF13175.6 ORF97225 - 0.11 12.2 8.0 0.2 11.3 8.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain UFD1 PF03152.14 ORF97197 - 3e-56 189.6 0.1 3.3e-56 189.5 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 DUF4256 PF14066.6 ORF97089 - 0.16 11.7 0.4 0.25 11.0 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) XhlA PF10779.9 ORF97089 - 8.2 6.7 6.6 12 6.2 1.8 2.3 2 0 0 2 2 2 0 Haemolysin XhlA NEMO PF11577.8 ORF95508 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO DUF1198 PF06711.11 ORF93601 - 1.3e-67 226.3 0.4 1.5e-67 226.1 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1198) FxsA PF04186.13 ORF93601 - 0.0038 17.3 0.0 0.0062 16.6 0.0 1.3 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein TPP_enzyme_M PF00205.22 ORF93601 - 0.0067 16.2 0.0 0.013 15.3 0.0 1.4 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain DpaA_N PF16924.5 ORF91709 - 0.036 14.2 0.1 0.059 13.5 0.1 1.5 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain BSP PF04450.12 ORF91709 - 0.088 12.6 0.9 0.1 12.3 0.9 1.3 1 1 0 1 1 1 0 Peptidase of plants and bacteria zf-RING_2 PF13639.6 ORF91665 - 3.5e-13 49.7 6.4 3.5e-13 49.7 6.4 1.9 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF91665 - 1.4e-08 34.9 3.9 1.4e-08 34.9 3.9 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF91665 - 1.4e-08 34.6 0.8 4e-08 33.2 0.8 1.8 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF91665 - 2.3e-08 33.6 4.0 5.3e-08 32.5 4.0 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF91665 - 2.1e-07 30.7 5.5 4.6e-07 29.6 5.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF91665 - 3.7e-07 30.0 4.4 6.8e-07 29.1 4.4 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF91665 - 3.7e-07 29.9 4.9 3.7e-07 29.9 4.9 1.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF91665 - 9.2e-07 28.6 4.6 1.8e-06 27.7 4.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF91665 - 1.7e-06 28.0 1.0 1.7e-06 28.0 1.0 1.8 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF91665 - 7.1e-05 22.6 5.4 0.00014 21.7 5.4 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Vps39_2 PF10367.9 ORF91665 - 0.0017 18.8 1.1 0.0056 17.1 0.2 2.1 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 Zn_ribbon_17 PF17120.5 ORF91665 - 0.0019 17.8 5.2 0.0019 17.8 5.2 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF91665 - 0.0024 17.7 4.1 0.0024 17.7 4.1 2.6 3 0 0 3 3 2 1 Prokaryotic RING finger family 1 Rtf2 PF04641.12 ORF91665 - 0.0032 16.9 0.3 0.0041 16.5 0.3 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-RING_4 PF14570.6 ORF91665 - 0.0036 17.1 6.4 0.0036 17.1 6.4 2.1 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF91665 - 0.0094 16.1 6.3 0.042 14.0 6.4 2.0 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF91665 - 0.018 15.0 0.2 0.03 14.3 0.2 1.4 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Rad50_zn_hook PF04423.14 ORF91665 - 0.13 12.1 0.9 0.23 11.3 0.0 1.7 2 0 0 2 2 2 0 Rad50 zinc hook motif U-box PF04564.15 ORF91665 - 0.16 12.2 0.0 0.31 11.3 0.0 1.4 1 0 0 1 1 1 0 U-box domain RINGv PF12906.7 ORF91665 - 0.69 10.1 10.8 0.85 9.8 7.1 2.6 2 1 0 2 2 2 0 RING-variant domain zf-Nse PF11789.8 ORF91665 - 1.2 9.0 5.3 0.28 11.1 2.0 1.8 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit DUF5523 PF17661.1 ORF91269 - 0.51 10.0 5.8 0.17 11.6 2.8 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5523) PBD PF00786.28 ORF87929 - 6.4e-07 29.6 0.6 0.00024 21.4 0.1 2.5 2 0 0 2 2 2 2 P21-Rho-binding domain DUF569 PF04601.13 ORF86125 - 0.11 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF569) DUF1221 PF06760.11 ORF86050 - 0.027 14.0 0.7 0.034 13.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1221) Cro PF09048.10 ORF86050 - 0.094 12.8 0.1 0.2 11.7 0.1 1.6 1 0 0 1 1 1 0 Cro YgbB PF02542.16 ORF8585 - 9.9e-67 224.1 0.0 1.1e-66 223.9 0.0 1.0 1 0 0 1 1 1 1 YgbB family DUF2759 PF10958.8 ORF85619 - 0.35 10.6 5.6 0.63 9.8 5.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) FSH1 PF03959.13 ORF85241 - 5.7e-19 68.6 0.0 7.4e-19 68.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Rep_Org_C PF06926.11 ORF84817 - 0.015 15.6 1.3 0.035 14.4 1.3 1.6 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus OTT_1508_deam PF14441.6 ORF84047 - 0.17 11.9 2.0 0.3 11.1 0.7 2.2 2 1 0 2 2 2 0 OTT_1508-like deaminase m_DGTX_Dc1a_b_c PF17491.2 ORF83805 - 0.043 14.5 0.2 0.085 13.5 0.2 1.4 1 0 0 1 1 1 0 Spider Toxins mu-diguetoxin-1 a, b and c p450 PF00067.22 ORF81578 - 8.4e-30 103.9 0.0 9e-30 103.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 adh_short PF00106.25 ORF81527 - 4.5e-12 45.8 0.0 6.2e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF81527 - 1.4e-09 37.9 0.1 2.2e-09 37.3 0.1 1.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1768 PF08719.11 ORF80198 - 3.2e-40 138.0 0.1 3.7e-40 137.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) ELH PF02323.15 ORF80198 - 0.015 14.6 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor DUF4028 PF13220.6 ORF80198 - 0.082 12.7 0.6 0.44 10.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4028) DUF4419 PF14388.6 ORF7885 - 4.7e-22 78.8 0.0 5.5e-22 78.5 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) Borrelia_orfD PF02999.14 ORF77803 - 0.013 15.8 0.2 0.018 15.4 0.2 1.2 1 0 0 1 1 1 0 Borrelia orf-D family ALG3 PF05208.13 ORF7523 - 7.2e-22 78.3 3.6 8.1e-22 78.1 3.6 1.0 1 0 0 1 1 1 1 ALG3 protein Alg6_Alg8 PF03155.15 ORF7523 - 0.0053 15.8 8.0 0.0082 15.2 2.5 2.0 1 1 1 2 2 2 2 ALG6, ALG8 glycosyltransferase family NEMO PF11577.8 ORF74966 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO PduV-EutP PF10662.9 ORF74200 - 7.1e-30 103.6 0.0 8.2e-30 103.4 0.0 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF74200 - 1.6e-05 24.9 0.2 0.0027 17.6 0.1 2.4 2 1 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF74200 - 4.9e-05 23.4 0.1 0.00028 21.0 0.1 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase ABC_tran PF00005.27 ORF74200 - 0.00015 22.3 0.0 0.00015 22.3 0.0 1.4 1 1 0 1 1 1 1 ABC transporter FeoB_N PF02421.18 ORF74200 - 0.00042 19.9 0.1 0.0021 17.6 0.1 1.9 1 1 0 1 1 1 1 Ferrous iron transport protein B cobW PF02492.19 ORF74200 - 0.00099 18.7 0.2 0.0061 16.2 0.0 2.0 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 ORF74200 - 0.0011 19.1 0.0 0.02 14.9 0.0 2.3 2 0 0 2 2 2 1 Dynamin family GTP_EFTU PF00009.27 ORF74200 - 0.0015 18.2 0.0 0.7 9.4 0.0 2.3 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain AAA_28 PF13521.6 ORF74200 - 0.0054 17.0 0.0 0.009 16.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 ORF74200 - 0.0075 16.2 0.7 0.37 10.6 0.1 2.2 1 1 1 2 2 2 1 Deoxynucleoside kinase ATP_bind_1 PF03029.17 ORF74200 - 0.032 14.0 0.3 0.47 10.2 0.1 2.2 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF74200 - 0.033 13.2 0.1 5.7 5.8 0.0 2.1 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 ORF74200 - 0.043 13.5 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRPRB PF09439.10 ORF74200 - 0.068 12.6 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_23 PF13476.6 ORF74200 - 0.074 13.5 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF74200 - 0.088 13.4 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.7 ORF74200 - 0.11 11.4 0.0 9.1 5.1 0.0 2.0 2 0 0 2 2 2 0 AAA-like domain TsaE PF02367.17 ORF74200 - 0.13 12.3 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Roc PF08477.13 ORF74200 - 0.14 12.4 0.0 0.23 11.7 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase p450 PF00067.22 ORF7343 - 8.4e-30 103.9 0.0 9e-30 103.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Pirin_C_2 PF17954.1 ORF72070 - 8.8e-09 35.4 0.0 1.3e-08 34.9 0.0 1.2 1 0 0 1 1 1 1 Quercetinase C-terminal cupin domain Pirin PF02678.16 ORF72070 - 7.8e-05 22.6 0.0 0.00012 22.0 0.0 1.3 1 0 0 1 1 1 1 Pirin Cupin_2 PF07883.11 ORF72070 - 0.0046 16.6 0.0 0.11 12.3 0.0 2.2 2 0 0 2 2 2 1 Cupin domain MRP-S34 PF16053.5 ORF70349 - 0.067 12.8 1.1 0.11 12.2 1.1 1.3 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S34 MORN PF02493.20 ORF7021 - 1.1e-05 25.0 14.8 0.047 13.6 0.3 5.1 6 0 0 6 6 6 3 MORN repeat DUF2759 PF10958.8 ORF69374 - 0.35 10.6 5.6 0.63 9.8 5.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) Glutaredoxin PF00462.24 ORF69318 - 6.3e-12 45.5 0.0 2.3e-11 43.8 0.0 1.8 2 0 0 2 2 2 1 Glutaredoxin DUF836 PF05768.14 ORF69318 - 0.0031 17.9 0.0 0.0049 17.2 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) TraF PF13728.6 ORF69318 - 0.028 14.2 0.4 0.052 13.4 0.4 1.5 1 1 0 1 1 1 0 F plasmid transfer operon protein NEMO PF11577.8 ORF6915 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO MORN PF02493.20 ORF68947 - 1.1e-05 25.0 14.8 0.047 13.6 0.3 5.1 6 0 0 6 6 6 3 MORN repeat Cpn60_TCP1 PF00118.24 ORF67761 - 3e-45 154.8 0.5 3.4e-45 154.6 0.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PH PF00169.29 ORF67179 - 3.4e-07 30.7 0.3 5.7e-07 30.0 0.3 1.4 1 0 0 1 1 1 1 PH domain Pkinase PF00069.25 ORF67179 - 3.8e-06 26.5 0.1 5.5e-06 25.9 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain PH_5 PF15405.6 ORF67179 - 0.00063 19.9 1.7 0.019 15.1 0.2 2.5 2 1 1 3 3 3 2 Pleckstrin homology domain CcmE PF03100.15 ORF66968 - 7.1e-46 155.4 0.0 8.3e-46 155.1 0.0 1.1 1 0 0 1 1 1 1 CcmE DUF5031 PF16434.5 ORF66968 - 0.053 12.7 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5031) DUF2628 PF10947.8 ORF66968 - 0.098 13.0 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) RseC_MucC PF04246.12 ORF664 - 2e-32 111.9 0.4 2.3e-32 111.7 0.4 1.0 1 0 0 1 1 1 1 Positive regulator of sigma(E), RseC/MucC Gly-zipper_Omp PF13488.6 ORF664 - 0.023 14.7 0.4 0.037 14.0 0.4 1.3 1 0 0 1 1 1 0 Glycine zipper Phage_holin_3_6 PF07332.11 ORF664 - 0.51 10.4 4.8 0.73 9.9 4.8 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III His_Me_b4a2 PF18275.1 ORF64817 - 0.11 12.5 2.9 0.81 9.8 0.1 3.1 3 0 0 3 3 3 0 His-Me finger endonuclease beta4-alpha2 domain MFS_1 PF07690.16 ORF64778 - 1.6e-07 30.6 11.8 1.9e-07 30.4 11.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily TraL PF07178.11 ORF64778 - 1 9.8 9.5 3.8 8.1 0.4 3.4 2 2 2 4 4 4 0 TraL protein zf-B_box PF00643.24 ORF6433 - 0.0067 16.5 2.3 0.0067 16.5 2.3 2.3 2 1 1 3 3 3 1 B-box zinc finger Pepsin-I3 PF06394.13 ORF6433 - 0.065 13.4 0.1 0.19 12.0 0.1 1.8 1 1 1 2 2 2 0 Pepsin inhibitor-3-like repeated domain WXG100 PF06013.12 ORF6433 - 0.1 12.9 0.0 0.4 10.9 0.0 1.8 2 0 0 2 2 2 0 Proteins of 100 residues with WXG Allantoicase PF03561.15 ORF63867 - 2.6 8.0 5.3 18 5.3 5.3 2.0 1 1 0 1 1 1 0 Allantoicase repeat Thioredoxin PF00085.20 ORF62145 - 3.9e-12 46.1 0.0 5.9e-12 45.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin DUF4381 PF14316.6 ORF62145 - 0.068 13.4 0.1 0.097 12.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) V_ATPase_I PF01496.19 ORF60203 - 6.1e-45 153.5 0.0 6.7e-45 153.3 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Sec23_BS PF08033.12 ORF57243 - 0.0014 19.3 0.0 0.0021 18.8 0.0 1.3 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain Aldo_ket_red PF00248.21 ORF57163 - 1.4e-07 31.1 0.1 2.5e-07 30.2 0.0 1.4 2 0 0 2 2 2 1 Aldo/keto reductase family HTH_AsnC-type PF13404.6 ORF57163 - 0.0097 15.7 4.1 0.027 14.3 0.1 2.9 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain Eapp_C PF10238.9 ORF56959 - 4.2e-32 111.3 6.3 7.6e-25 87.7 2.7 2.1 1 1 1 2 2 2 2 E2F-associated phosphoprotein Yippee-Mis18 PF03226.14 ORF56959 - 0.00092 19.4 2.3 0.0016 18.6 2.3 1.3 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly PhnA_Zn_Ribbon PF08274.12 ORF56959 - 2.1 8.4 0.0 2.1 8.4 0.0 2.9 2 1 0 2 2 2 0 PhnA Zinc-Ribbon DUF3799 PF12684.7 ORF56923 - 3.4e-22 79.4 0.0 3.9e-22 79.2 0.0 1.0 1 0 0 1 1 1 1 PDDEXK-like domain of unknown function (DUF3799) SH3_3 PF08239.11 ORF55771 - 0.003 17.8 0.1 0.0076 16.5 0.0 1.7 2 0 0 2 2 2 1 Bacterial SH3 domain SH3_2 PF07653.17 ORF55771 - 0.0097 15.6 0.0 0.014 15.0 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain LZ_Tnp_IS66 PF13007.7 ORF55771 - 0.22 12.3 0.7 0.34 11.7 0.7 1.3 1 0 0 1 1 1 0 Transposase C of IS166 homeodomain RRM_1 PF00076.22 ORF55709 - 2.3e-12 46.5 0.0 3.1e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF55709 - 3.2e-06 27.0 3.3 4.8e-06 26.4 3.3 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_5 PF14787.6 ORF55709 - 8.4e-05 22.2 3.5 0.00013 21.6 3.5 1.3 1 0 0 1 1 1 1 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF55709 - 0.00012 21.9 0.2 0.00027 20.8 0.2 1.6 1 0 0 1 1 1 1 Zinc knuckle OB_RNB PF08206.11 ORF55709 - 0.0048 16.5 0.2 0.022 14.4 0.1 2.2 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_2 PF13696.6 ORF55709 - 0.083 12.7 2.0 0.13 12.1 2.0 1.3 1 0 0 1 1 1 0 Zinc knuckle Omega_Repress PF07764.11 ORF53323 - 0.018 15.6 3.5 0.042 14.4 1.4 2.1 2 0 0 2 2 2 0 Omega Transcriptional Repressor BRE1 PF08647.11 ORF53089 - 2.2 8.4 18.5 2.7 8.1 14.3 2.6 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase Fez1 PF06818.15 ORF5291 - 0.0096 16.4 7.7 0.014 15.8 7.7 1.4 1 0 0 1 1 1 1 Fez1 OST-HTH PF12872.7 ORF5291 - 0.13 12.1 0.4 16 5.4 0.1 2.2 2 0 0 2 2 2 0 OST-HTH/LOTUS domain HALZ PF02183.18 ORF5291 - 0.16 12.2 12.9 0.56 10.5 1.1 3.3 3 0 0 3 3 3 0 Homeobox associated leucine zipper DUF5339 PF17274.2 ORF5291 - 2 9.3 9.3 2.2 9.2 3.9 2.9 3 0 0 3 3 3 0 Family of unknown function (DUF5339) KLRAQ PF10205.9 ORF5291 - 2.2 8.6 13.1 11 6.4 12.1 2.5 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein CCDC-167 PF15188.6 ORF5291 - 2.6 8.4 9.0 1.7 9.1 4.2 2.2 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 CENP-H PF05837.12 ORF5291 - 3.4 8.1 10.8 3 8.3 8.5 1.9 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Swi5 PF07061.11 ORF5291 - 6.2 7.0 10.2 4 7.6 2.8 2.6 2 1 0 2 2 2 0 Swi5 FAM76 PF16046.5 ORF5291 - 6.7 6.0 14.1 17 4.7 14.1 1.7 1 1 0 1 1 1 0 FAM76 protein UPF0242 PF06785.11 ORF5291 - 7.9 6.5 13.9 4.9 7.2 1.0 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Glyoxalase_6 PF18029.1 ORF52851 - 0.0023 18.7 0.0 0.0031 18.3 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 ORF52851 - 0.024 14.8 0.0 0.067 13.4 0.0 1.8 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF52851 - 0.1 12.9 0.0 0.28 11.5 0.0 1.7 1 1 1 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MORN PF02493.20 ORF52423 - 2.7e-09 36.4 25.8 0.0036 17.1 0.1 6.1 7 0 0 7 7 7 5 MORN repeat Chitin_synth_2 PF03142.15 ORF52277 - 5.7e-13 48.3 0.3 1.1e-12 47.4 0.3 1.4 1 1 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF52277 - 5.8e-05 23.1 0.1 6.4e-05 23.0 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF52277 - 0.0051 16.7 0.0 0.0054 16.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 NADH-u_ox-rdase PF10785.9 ORF51553 - 3.2e-08 34.1 0.6 4.4e-08 33.7 0.6 1.2 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit TMEM220 PF15071.6 ORF51553 - 0.00084 20.1 0.1 0.0011 19.7 0.1 1.2 1 0 0 1 1 1 1 Transmembrane family 220, helix PUF PF00806.19 ORF51525 - 5.4e-10 38.4 0.5 1e-06 28.1 0.2 2.4 2 0 0 2 2 2 2 Pumilio-family RNA binding repeat NEMO PF11577.8 ORF50324 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO SRAP PF02586.14 ORF47862 - 5.2e-41 140.6 0.0 5.8e-41 140.4 0.0 1.0 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) Foamy_BEL PF03274.14 ORF47862 - 0.02 14.2 0.1 0.021 14.2 0.1 1.2 1 0 0 1 1 1 0 Foamy virus BEL 1/2 protein B9-C2 PF07162.11 ORF47401 - 4.4e-25 88.8 0.0 5.3e-25 88.6 0.0 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Myb_DNA-binding PF00249.31 ORF47401 - 0.0073 16.5 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain DUF444 PF04285.12 ORF47049 - 0.018 14.1 0.2 0.021 13.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF444) DUF1768 PF08719.11 ORF46988 - 8.2e-41 139.9 0.1 9.5e-41 139.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) DUF4028 PF13220.6 ORF46988 - 0.1 12.4 0.1 0.2 11.5 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) ELH PF02323.15 ORF46988 - 0.12 11.7 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Egg-laying hormone precursor Phage_30_3 PF08010.11 ORF46988 - 0.13 12.0 0.0 0.35 10.7 0.0 1.7 1 1 0 1 1 1 0 Bacteriophage protein GP30.3 Pkinase PF00069.25 ORF46260 - 6e-41 140.6 0.0 6.6e-41 140.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46260 - 7.5e-17 61.5 0.0 8.1e-17 61.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF46260 - 2.4e-08 33.2 0.0 2.9e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF46260 - 7.2e-05 22.2 0.0 0.00012 21.6 0.0 1.3 1 1 0 1 1 1 1 Kinase-like EcKinase PF02958.20 ORF46260 - 0.0005 19.5 0.3 0.0007 19.0 0.3 1.2 1 0 0 1 1 1 1 Ecdysteroid kinase APH PF01636.23 ORF46260 - 0.0051 16.8 0.2 0.0071 16.3 0.2 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF46260 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 ORF46260 - 0.072 12.6 0.1 0.1 12.1 0.1 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL dCMP_cyt_deam_2 PF08211.12 ORF45919 - 1.2e-45 154.9 0.0 1.5e-45 154.6 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Hydrolase_6 PF13344.6 ORF45423 - 0.00013 22.0 0.0 0.00019 21.4 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF45423 - 0.0038 17.0 0.0 0.0051 16.6 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NEMO PF11577.8 ORF42736 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO DUF2759 PF10958.8 ORF41364 - 0.35 10.6 5.6 0.63 9.8 5.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) ASL_C PF08328.11 ORF41249 - 1.4e-53 179.9 0.0 1.7e-53 179.6 0.0 1.1 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal Lyase_1 PF00206.20 ORF41249 - 0.065 12.6 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Lyase MTHFR PF02219.17 ORF40991 - 1.7e-05 24.3 0.0 2.1e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase CbiA PF01656.23 ORF40943 - 0.0012 18.9 0.0 0.0015 18.6 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 ORF40943 - 0.14 12.0 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain ParA PF10609.9 ORF40943 - 0.19 11.1 0.0 1.1 8.6 0.0 1.9 1 1 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase WD40 PF00400.32 ORF40692 - 0.031 15.2 0.1 0.16 12.9 0.1 2.3 2 0 0 2 2 2 0 WD domain, G-beta repeat DUF1629 PF07791.11 ORF40692 - 0.14 12.3 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1629) Toxin_2 PF00451.19 ORF3919 - 0.033 14.5 0.5 0.067 13.5 0.1 1.8 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 DUF569 PF04601.13 ORF38416 - 0.11 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF569) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks137.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks137.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks137.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks137.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Oxysterol_BP PF01237.18 ORF37119 - 1.9e-16 59.9 0.0 2.1e-16 59.7 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein DpaA_N PF16924.5 ORF37029 - 0.037 14.1 0.1 0.061 13.4 0.1 1.5 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain BSP PF04450.12 ORF37029 - 0.079 12.7 0.7 0.096 12.5 0.7 1.3 1 1 0 1 1 1 0 Peptidase of plants and bacteria His_Me_b4a2 PF18275.1 ORF36798 - 0.11 12.6 2.9 0.81 9.8 0.1 3.1 3 0 0 3 3 3 0 His-Me finger endonuclease beta4-alpha2 domain EF-hand_6 PF13405.6 ORF3655 - 6.2e-11 41.3 10.5 1.3e-05 24.7 0.2 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF3655 - 1e-08 34.1 16.0 0.00011 21.4 3.8 3.0 4 0 0 4 4 4 2 EF hand EF-hand_7 PF13499.6 ORF3655 - 5.1e-07 30.1 5.3 0.0015 18.9 0.1 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF3655 - 1.1e-05 24.7 11.2 0.019 14.5 3.2 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF3655 - 2.2e-05 24.2 9.0 0.018 14.9 2.5 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF3655 - 0.00084 19.3 2.2 0.016 15.2 0.2 2.2 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand Vac14_Fab1_bd PF12755.7 ORF3655 - 0.087 13.4 0.1 0.19 12.4 0.1 1.6 1 0 0 1 1 1 0 Vacuolar 14 Fab1-binding region WYL_3 PF18488.1 ORF36480 - 0.013 15.9 0.5 0.024 15.0 0.5 1.5 1 0 0 1 1 1 0 WYL domain ERGIC_N PF13850.6 ORF36026 - 0.0052 17.1 0.7 0.0076 16.6 0.4 1.6 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Arch_flagellin PF01917.16 ORF36026 - 6.7 6.9 12.1 1.3e+03 -0.5 12.1 2.4 1 1 0 1 1 1 0 Archaebacterial flagellin zf-RING_2 PF13639.6 ORF35669 - 2e-10 40.8 7.4 2.9e-10 40.3 7.4 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF35669 - 4.6e-08 32.6 5.9 4.6e-08 32.6 5.9 1.9 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF35669 - 7.2e-08 32.2 7.0 1.2e-07 31.5 7.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF35669 - 4.1e-06 26.7 2.8 6.6e-06 26.1 2.8 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF35669 - 8.1e-06 26.0 8.2 2.3e-05 24.6 8.2 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain FANCL_C PF11793.8 ORF35669 - 0.00011 22.3 7.0 0.00033 20.8 7.0 1.9 1 1 0 1 1 1 1 FANCL C-terminal domain zf-RING_5 PF14634.6 ORF35669 - 0.00017 21.5 5.5 0.00026 20.9 5.5 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF35669 - 0.00096 19.0 7.9 0.0021 17.9 7.9 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF35669 - 0.0019 18.0 4.4 0.0029 17.4 4.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 ORF35669 - 0.002 18.0 5.6 0.0034 17.2 5.6 1.4 1 0 0 1 1 1 1 PHD-finger zf-ANAPC11 PF12861.7 ORF35669 - 0.0023 18.0 4.3 0.0077 16.3 4.2 2.0 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF35669 - 0.0039 17.1 2.3 0.0039 17.1 2.3 2.3 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 Zn_ribbon_17 PF17120.5 ORF35669 - 0.0042 16.7 7.5 0.0096 15.5 7.5 1.6 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-HC5HC2H_2 PF13832.6 ORF35669 - 0.017 15.3 3.0 0.027 14.6 2.9 1.5 1 1 0 1 1 1 0 PHD-zinc-finger like domain RINGv PF12906.7 ORF35669 - 0.024 14.8 6.1 0.057 13.5 5.9 1.8 1 1 0 1 1 1 0 RING-variant domain zf-HC5HC2H PF13771.6 ORF35669 - 0.099 12.9 5.8 0.13 12.5 5.0 1.7 1 1 0 1 1 1 0 PHD-like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF35669 - 0.22 11.7 5.3 0.85 9.8 5.3 1.9 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING-like PF08746.11 ORF35669 - 1.6 9.1 7.4 3.4 8.1 7.4 1.6 1 1 0 1 1 1 0 RING-like domain zinc_ribbon_9 PF14369.6 ORF35669 - 7.6 6.9 8.2 4.3 7.7 0.4 2.9 4 0 0 4 4 2 0 zinc-ribbon DUF4148 PF13663.6 ORF34060 - 0.033 14.4 0.1 0.062 13.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) Cyt-b5 PF00173.28 ORF3285 - 3.5e-16 59.1 0.0 5.5e-16 58.5 0.0 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FAD_binding_2 PF00890.24 ORF3285 - 7.7e-13 48.3 0.2 1.1e-12 47.8 0.2 1.2 1 0 0 1 1 1 1 FAD binding domain Fer2_2 PF01799.20 ORF32695 - 3.3e-24 84.7 0.5 3.3e-24 84.7 0.5 1.6 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 ORF32695 - 5.2e-07 29.5 1.1 5.2e-07 29.5 1.1 1.9 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 ORF32695 - 0.023 14.7 1.8 0.023 14.7 1.8 1.6 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain HicB-like_2 PF15970.5 ORF30435 - 0.0041 17.2 1.0 0.0094 16.1 0.4 1.9 2 0 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system AKAP7_NLS PF10469.9 ORF30435 - 0.018 15.0 2.2 0.024 14.6 2.2 1.4 1 1 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain DUF3108 PF11306.8 ORF30435 - 0.051 13.5 0.5 0.059 13.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3108) PIF1 PF05970.14 ORF3008 - 0.036 13.2 1.6 0.049 12.8 1.6 1.1 1 0 0 1 1 1 0 PIF1-like helicase EMC3_TMCO1 PF01956.16 ORF3008 - 0.11 12.3 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like NEMO PF11577.8 ORF27364 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO GDA1_CD39 PF01150.17 ORF26326 - 0.041 12.5 0.1 0.052 12.2 0.1 1.1 1 0 0 1 1 1 0 GDA1/CD39 (nucleoside phosphatase) family PKcGMP_CC PF16808.5 ORF25698 - 4.2e-05 23.3 9.5 0.089 12.7 4.2 3.1 1 1 1 2 2 2 2 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF3552 PF12072.8 ORF25698 - 0.0052 16.2 1.2 0.0065 15.9 1.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) HAP1_N PF04849.13 ORF25698 - 0.014 14.7 0.7 0.018 14.2 0.7 1.1 1 0 0 1 1 1 0 HAP1 N-terminal conserved region Med4 PF10018.9 ORF25698 - 0.063 12.9 0.5 0.098 12.3 0.5 1.3 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 FAM76 PF16046.5 ORF25698 - 0.066 12.6 0.1 0.1 12.0 0.1 1.3 1 0 0 1 1 1 0 FAM76 protein DUF4200 PF13863.6 ORF25698 - 0.16 12.3 2.2 0.25 11.7 2.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) SlyX PF04102.12 ORF25698 - 1.1 10.0 7.2 2.3 8.9 6.7 1.9 1 1 0 1 1 1 0 SlyX Ras PF00071.22 ORF25041 - 1e-06 28.4 0.0 1.4e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Ras family NEMO PF11577.8 ORF24119 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO DUF5329 PF17263.2 ORF2396 - 0.16 12.1 0.0 13 6.0 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5329) Rep_Org_C PF06926.11 ORF23896 - 0.015 15.6 1.3 0.035 14.4 1.3 1.6 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus DoxX PF07681.12 ORF23871 - 0.00052 20.6 2.0 0.00052 20.6 2.0 1.5 2 0 0 2 2 2 1 DoxX Bestrophin PF01062.21 ORF23871 - 0.019 14.4 0.3 0.022 14.2 0.3 1.1 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel Phage_integrase PF00589.22 ORF23715 - 4.4e-23 81.9 0.0 5.7e-23 81.6 0.0 1.1 1 0 0 1 1 1 1 Phage integrase family Peptidase_C1 PF00112.23 ORF2334 - 5.3e-28 98.6 0.6 7.6e-28 98.1 0.6 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF2334 - 0.0017 17.2 0.5 0.0024 16.7 0.5 1.2 1 0 0 1 1 1 1 Peptidase C1-like family DUF4256 PF14066.6 ORF23336 - 0.16 11.7 0.4 0.25 11.0 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) XhlA PF10779.9 ORF23336 - 8.2 6.7 6.6 12 6.2 1.8 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Oxysterol_BP PF01237.18 ORF22339 - 1.9e-16 59.9 0.0 2.1e-16 59.7 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein NEMO PF11577.8 ORF19881 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO Serine_rich PF08824.10 ORF19811 - 0.045 13.7 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 Serine rich protein interaction domain Mei5_like PF17021.5 ORF1907 - 0.0067 16.5 0.4 0.012 15.6 0.4 1.4 1 0 0 1 1 1 1 Putative double-strand recombination repair-like DUF4256 PF14066.6 ORF18334 - 0.16 11.7 0.4 0.25 11.0 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) XhlA PF10779.9 ORF18334 - 8.2 6.7 6.6 12 6.2 1.8 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Gp_dh_C PF02800.20 ORF16516 - 3.6e-63 211.9 0.1 4.1e-63 211.7 0.1 1.0 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DpaA_N PF16924.5 ORF16082 - 0.037 14.1 0.1 0.061 13.4 0.1 1.5 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain BSP PF04450.12 ORF16082 - 0.079 12.7 0.7 0.096 12.5 0.7 1.3 1 1 0 1 1 1 0 Peptidase of plants and bacteria RdRP PF05183.12 ORF15937 - 1.7e-29 103.0 0.0 1.8e-29 102.8 0.0 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase DUF4550 PF15084.6 ORF15937 - 1 9.8 5.2 3.5 8.1 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4550) MOSP_C PF02722.15 ORF15361 - 0.12 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Major Outer Sheath Protein C-terminal domain NEMO PF11577.8 ORF15016 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO Toxin-deaminase PF14424.6 ORF14292 - 0.0032 17.6 0.1 0.0042 17.2 0.1 1.2 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases CysG_dimeriser PF10414.9 ORF14292 - 0.073 12.8 0.5 0.14 11.9 0.5 1.4 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region PAN_4 PF14295.6 ORF13525 - 0.0028 17.5 2.3 0.0066 16.3 2.3 1.7 1 1 0 1 1 1 1 PAN domain DUF569 PF04601.13 ORF112576 - 0.11 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF569) Toxin-deaminase PF14424.6 ORF111627 - 0.0032 17.6 0.1 0.0042 17.2 0.1 1.2 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases CysG_dimeriser PF10414.9 ORF111627 - 0.073 12.8 0.5 0.14 11.9 0.5 1.4 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region Spike_NTD PF16451.5 ORF111621 - 0.065 12.6 0.0 0.085 12.2 0.0 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain GyrB_insert PF18053.1 ORF111621 - 1.4 8.8 10.9 0.24 11.3 1.7 2.0 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain ATP-synt_E PF05680.12 ORF111621 - 3.9 7.9 13.5 0.59 10.5 0.2 2.3 2 1 0 2 2 2 0 ATP synthase E chain Phage_HK97_TLTM PF06120.11 ORF111621 - 7.4 5.7 14.6 14 4.7 14.6 1.5 1 1 0 1 1 1 0 Tail length tape measure protein DUF2140 PF09911.9 ORF111621 - 8.6 5.9 9.4 1.3 8.5 3.6 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) BLOC1_2 PF10046.9 ORF110795 - 0.00029 21.1 9.8 0.00029 21.1 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Y2_Tnp PF04986.13 ORF110795 - 0.0035 17.4 0.2 0.0049 16.9 0.2 1.3 1 0 0 1 1 1 1 Putative transposase TMF_TATA_bd PF12325.8 ORF110795 - 0.0079 16.4 10.2 0.43 10.8 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding ZnuA PF01297.17 ORF110795 - 0.015 14.7 0.4 0.018 14.5 0.4 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Baculo_PEP_C PF04513.12 ORF110795 - 0.022 14.8 6.1 0.036 14.1 6.1 1.3 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Macoilin PF09726.9 ORF110795 - 0.067 11.8 5.3 0.078 11.5 5.3 1.0 1 0 0 1 1 1 0 Macoilin family DivIC PF04977.15 ORF110795 - 0.082 12.7 8.5 2.2 8.1 0.9 2.6 1 1 0 2 2 2 0 Septum formation initiator Tup_N PF08581.10 ORF110795 - 0.49 10.7 8.7 9.1 6.7 3.8 2.2 1 1 1 2 2 2 0 Tup N-terminal PRKG1_interact PF15898.5 ORF110795 - 0.59 11.1 7.3 0.83 10.6 0.5 2.5 3 0 0 3 3 3 0 cGMP-dependent protein kinase interacting domain DUF1664 PF07889.12 ORF110795 - 0.73 9.9 9.3 1.2 9.2 6.3 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Spc24 PF08286.11 ORF110795 - 2.8 8.2 10.2 15 5.9 3.9 2.4 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF5595 PF18077.1 ORF110795 - 3 8.0 8.2 2.8 8.1 2.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5595) PLU-1 PF08429.11 ORF110371 - 0.0032 16.7 0.5 0.0037 16.5 0.5 1.1 1 0 0 1 1 1 1 PLU-1-like protein CDC45 PF02724.14 ORF110313 - 0.62 8.3 8.5 0.7 8.1 8.5 1.0 1 0 0 1 1 1 0 CDC45-like protein NEMO PF11577.8 ORF108771 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO Thioredoxin PF00085.20 ORF107877 - 6.7e-23 80.6 0.1 8.5e-23 80.3 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF107877 - 0.0003 21.2 0.2 0.022 15.2 0.2 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 ORF107877 - 0.0039 17.2 0.0 0.0057 16.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_8 PF13905.6 ORF107877 - 0.08 13.3 0.1 1.9 8.9 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin-like Thioredoxin_7 PF13899.6 ORF107877 - 0.11 12.7 0.0 0.27 11.4 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin-like COE1_DBD PF16422.5 ORF107877 - 0.15 11.5 0.0 0.26 10.7 0.0 1.3 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain zf-RING_2 PF13639.6 ORF107320 - 5.5e-13 49.0 6.3 5.5e-13 49.0 6.3 1.9 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF107320 - 2.1e-08 34.0 0.9 5.9e-08 32.6 1.0 1.7 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF107320 - 2.3e-08 33.6 4.0 5.3e-08 32.5 4.0 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF107320 - 5.9e-08 32.9 4.1 5.9e-08 32.9 4.1 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF107320 - 3.5e-07 30.0 5.7 7.5e-07 28.9 5.7 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF107320 - 7.3e-07 29.0 4.1 1.4e-06 28.2 4.1 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF107320 - 8.5e-07 28.7 4.8 1.7e-06 27.8 4.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF107320 - 9.8e-07 28.5 4.8 9.8e-07 28.5 4.8 1.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF107320 - 2.5e-06 27.5 1.0 2.5e-06 27.5 1.0 1.8 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF107320 - 0.00043 20.1 6.0 0.00085 19.1 6.0 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF107320 - 0.0011 18.5 5.6 0.0011 18.5 5.6 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF107320 - 0.0024 17.7 4.1 0.0024 17.7 4.1 2.6 3 0 0 3 3 2 1 Prokaryotic RING finger family 1 Vps39_2 PF10367.9 ORF107320 - 0.0025 18.2 1.4 0.0056 17.1 0.2 2.0 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 zf-RING_4 PF14570.6 ORF107320 - 0.0027 17.5 6.3 0.0027 17.5 6.3 2.1 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain Rtf2 PF04641.12 ORF107320 - 0.005 16.2 0.4 0.0068 15.8 0.4 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-C3HC4_4 PF15227.6 ORF107320 - 0.014 15.6 7.2 0.061 13.5 7.2 2.0 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF107320 - 0.022 14.8 0.2 0.037 14.0 0.2 1.4 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain RINGv PF12906.7 ORF107320 - 0.99 9.6 10.8 1.2 9.3 7.2 2.6 2 1 0 2 2 2 0 RING-variant domain zf-Nse PF11789.8 ORF107320 - 1.6 8.6 5.3 0.37 10.6 1.9 1.8 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit m_DGTX_Dc1a_b_c PF17491.2 ORF107044 - 0.043 14.5 0.2 0.085 13.5 0.2 1.4 1 0 0 1 1 1 0 Spider Toxins mu-diguetoxin-1 a, b and c DnaJ_CXXCXGXG PF00684.19 ORF106476 - 0.0097 16.2 11.2 0.04 14.3 10.5 2.3 1 1 1 2 2 2 2 DnaJ central domain Transp_Tc5_C PF04236.15 ORF106476 - 1.8 9.0 6.7 11 6.5 0.6 2.3 2 0 0 2 2 2 0 Tc5 transposase C-terminal domain V-SNARE PF05008.15 ORF104522 - 0.032 14.6 2.8 0.032 14.6 2.8 2.8 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus Allexi_40kDa PF05549.11 ORF104522 - 0.042 13.4 3.5 0.27 10.7 3.5 2.0 1 1 0 1 1 1 0 Allexivirus 40kDa protein DUF3106 PF11304.8 ORF104522 - 0.084 13.4 7.0 0.15 12.6 6.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3106) Spc7 PF08317.11 ORF104522 - 1.5 7.6 18.0 2 7.2 18.0 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein FapA PF03961.13 ORF104522 - 3.2 6.2 10.1 4 5.9 10.1 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A NEMO PF11577.8 ORF102645 - 0.3 11.1 4.5 0.63 10.1 4.5 1.6 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO HECT PF00632.25 ORF102584 - 1.2e-52 179.4 0.2 1.3e-52 179.2 0.2 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) RHH_4 PF13467.6 ORF102584 - 0.03 14.2 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 Ribbon-helix-helix domain MAJIN PF15077.6 ORF10051 - 3.1 7.5 5.2 4.8 6.9 5.2 1.3 1 0 0 1 1 1 0 Membrane-anchored junction protein DUF2834 PF11196.8 NODE_42798_length_472_cov_68.070938_g35160_i0reverse_frame_1 - 0.03 14.7 0.5 0.046 14.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2834) Pkinase PF00069.25 NODE_42777_length_472_cov_109.675057_g35140_i0forward_frame_1 - 0.00032 20.2 0.0 0.0004 19.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain AAA_5 PF07728.14 NODE_42775_length_472_cov_114.569794_g35138_i0forward_frame_1 - 1.5e-14 54.2 0.0 2e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ARL2_Bind_BART PF11527.8 NODE_42769_length_472_cov_160.951945_g35132_i0forward_frame_1 - 0.058 13.5 1.9 0.16 12.1 0.5 2.1 2 1 0 2 2 2 0 The ARF-like 2 binding protein BART Pox_RNA_Pol_19 PF05320.12 NODE_42769_length_472_cov_160.951945_g35132_i0forward_frame_1 - 2.8 7.9 7.6 17 5.4 0.1 2.1 2 0 0 2 2 2 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit Piezo_RRas_bdg PF12166.8 NODE_42764_length_472_cov_190.590389_g35127_i0reverse_frame_1 - 1.1e-26 94.1 0.5 1.3e-26 93.9 0.5 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF1794 PF08768.11 NODE_42761_length_472_cov_260.137300_g35124_i0forward_frame_1 - 0.93 9.4 2.4 19 5.2 0.1 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF1794) YadA_head PF05658.14 NODE_42761_length_472_cov_260.137300_g35124_i0forward_frame_1 - 2.6 8.5 56.4 23 5.5 0.1 10.4 3 2 6 9 9 9 0 Head domain of trimeric autotransporter adhesin RCC1_2 PF13540.6 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 5.3e-05 22.9 7.9 0.11 12.3 0.7 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 0.0077 16.3 0.2 25 4.9 0.0 3.0 2 1 1 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 0.012 16.1 0.0 6.9 7.2 0.0 3.0 3 1 0 3 3 3 0 Spectrin repeat FtsQ PF03799.15 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 0.065 14.1 0.0 0.51 11.2 0.0 2.1 1 1 1 2 2 2 0 Cell division protein FtsQ MinC_C PF03775.16 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 0.09 12.8 0.4 4.8 7.2 0.0 2.9 2 1 0 3 3 3 0 Septum formation inhibitor MinC, C-terminal domain SR-25 PF10500.9 NODE_42755_length_472_cov_390.629291_g35119_i0forward_frame_1 - 1.8 8.1 14.8 2.6 7.6 14.8 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF674 PF05056.12 NODE_42739_length_473_cov_2.755708_g35107_i0reverse_frame_1 - 0.15 10.9 0.1 0.14 11.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) Kinesin PF00225.23 NODE_42739_length_473_cov_2.755708_g35107_i0forward_frame_1 - 6.7e-08 31.8 0.0 9.2e-08 31.4 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain zf-CCHC PF00098.23 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 2e-06 27.6 4.7 5.2e-06 26.3 4.7 1.8 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_3 PF13917.6 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 0.029 14.3 0.9 0.029 14.3 0.9 1.7 2 0 0 2 2 2 0 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 0.041 13.7 8.5 0.092 12.6 8.5 1.6 1 0 0 1 1 1 0 Zinc knuckle Tox-ART-HYE1 PF15634.6 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 0.11 11.8 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 HYE1 signature containing ADP-ribosyltransferase DcuC PF03606.15 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 0.23 9.9 0.0 0.31 9.4 0.0 1.1 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier Chor_lyase PF04345.13 NODE_42727_length_473_cov_77.141553_g35097_i0reverse_frame_1 - 0.12 12.0 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Chorismate lyase NapE PF06796.11 NODE_42727_length_473_cov_77.141553_g35097_i0forward_frame_1 - 0.063 12.8 0.3 0.063 12.8 0.3 2.4 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE Rrn6 PF10214.9 NODE_42719_length_473_cov_100.125571_g35089_i0reverse_frame_1 - 0.17 10.3 1.4 0.23 9.9 1.4 1.2 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF2340 PF10209.9 NODE_42698_length_473_cov_31315.958904_g331_i3forward_frame_1 - 0.01 16.3 0.7 2 8.9 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2340) IlvGEDA_leader PF08046.11 NODE_42694_length_474_cov_1.774487_g35068_i0forward_frame_1 - 0.34 10.4 4.3 0.31 10.5 0.4 2.2 2 0 0 2 2 2 0 IlvGEDA operon leader peptide Toxin_27 PF08099.11 NODE_42694_length_474_cov_1.774487_g35068_i0forward_frame_1 - 7.9 6.7 8.3 3.2 7.9 0.8 2.7 3 0 0 3 3 3 0 Scorpion calcine family Lamprin PF06403.11 NODE_42686_length_474_cov_2.437358_g35060_i0forward_frame_1 - 1.2 9.1 6.1 2.5 8.0 5.8 1.7 1 1 1 2 2 2 0 Lamprin Nepo_coat PF03391.15 NODE_42681_length_474_cov_3.362187_g35055_i0reverse_frame_1 - 0.042 13.3 0.0 0.64 9.5 0.0 2.0 1 1 1 2 2 2 0 Nepovirus coat protein, central domain DUF1230 PF06799.11 NODE_42675_length_474_cov_75.038724_g35049_i0forward_frame_1 - 0.00027 21.0 0.0 0.00032 20.8 0.0 1.1 1 0 0 1 1 1 1 Conserved in the green lineage and diatoms 27 Phage_holin_3_6 PF07332.11 NODE_42675_length_474_cov_75.038724_g35049_i0forward_frame_1 - 0.02 14.9 0.5 0.12 12.4 0.1 2.0 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Chromate_transp PF02417.15 NODE_42675_length_474_cov_75.038724_g35049_i0forward_frame_1 - 0.035 14.2 0.6 0.048 13.8 0.6 1.3 1 1 0 1 1 1 0 Chromate transporter MRP-S32 PF10210.9 NODE_42674_length_474_cov_80.123007_g35048_i0reverse_frame_1 - 0.082 13.5 1.7 0.15 12.6 1.7 1.4 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S32 HTH_Crp_2 PF13545.6 NODE_42672_length_474_cov_82.191344_g35046_i0reverse_frame_1 - 0.17 11.9 0.0 0.29 11.2 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MatE PF01554.18 NODE_42654_length_474_cov_155.687927_g35029_i0reverse_frame_1 - 2.7e-07 30.4 0.6 2.7e-07 30.4 0.6 1.4 2 0 0 2 2 2 1 MatE TMEM156 PF15106.6 NODE_42635_length_475_cov_2.045455_g35012_i0reverse_frame_3 - 0.095 12.1 1.4 0.13 11.7 1.4 1.2 1 0 0 1 1 1 0 TMEM156 protein family DUF4372 PF14294.6 NODE_42635_length_475_cov_2.045455_g35012_i0forward_frame_2 - 0.028 14.6 0.2 0.063 13.4 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4372) DUF2770 PF10968.8 NODE_42634_length_475_cov_2.075000_g35011_i0reverse_frame_2 - 0.053 13.5 0.7 0.084 12.9 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2770) P53_C PF11619.8 NODE_42633_length_475_cov_2.215909_g35010_i0reverse_frame_3 - 0.062 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Transcription factor P53 - C terminal domain Molybdopterin PF00384.22 NODE_42632_length_475_cov_2.295455_g35009_i0reverse_frame_3 - 4.1e-50 171.0 0.2 4.6e-50 170.8 0.2 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Trehalose_PPase PF02358.16 NODE_42632_length_475_cov_2.295455_g35009_i0forward_frame_3 - 0.16 11.0 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase DUF3510 PF12022.8 NODE_42632_length_475_cov_2.295455_g35009_i0forward_frame_2 - 0.062 13.7 0.9 3.5 8.0 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3510) DUF241 PF03087.14 NODE_42629_length_475_cov_2.604545_g35006_i0reverse_frame_2 - 0.0084 16.0 1.0 0.01 15.7 1.0 1.2 1 0 0 1 1 1 1 Arabidopsis protein of unknown function Tom22 PF04281.13 NODE_42629_length_475_cov_2.604545_g35006_i0reverse_frame_2 - 1.3 8.8 5.6 2 8.2 5.2 1.7 1 1 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 Striatin PF08232.12 NODE_42629_length_475_cov_2.604545_g35006_i0reverse_frame_2 - 2.2 8.9 14.6 0.12 12.9 5.3 2.1 1 1 1 2 2 2 0 Striatin family DUF5381 PF17353.2 NODE_42629_length_475_cov_2.604545_g35006_i0forward_frame_2 - 2 8.2 10.0 0.086 12.6 4.2 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5381) DUF2024 PF09630.10 NODE_42621_length_475_cov_24.559091_g34998_i0reverse_frame_3 - 0.15 11.9 0.1 0.22 11.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) DUF5344 PF17279.2 NODE_42620_length_475_cov_39.775000_g34997_i0reverse_frame_3 - 0.021 15.4 0.7 0.037 14.6 0.7 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5344) KNOX2 PF03791.13 NODE_42620_length_475_cov_39.775000_g34997_i0reverse_frame_3 - 0.025 14.1 0.1 0.039 13.5 0.1 1.3 1 0 0 1 1 1 0 KNOX2 domain NPL PF17800.1 NODE_42618_length_475_cov_62.677273_g34995_i0reverse_frame_2 - 0.12 13.0 0.9 0.16 12.6 0.9 1.2 1 0 0 1 1 1 0 Nucleoplasmin-like domain DUF4073 PF13285.6 NODE_42618_length_475_cov_62.677273_g34995_i0reverse_frame_2 - 1.4 8.5 7.5 0.12 12.0 3.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4073) PP2C PF00481.21 NODE_42616_length_475_cov_64.315909_g34993_i0forward_frame_2 - 4.5e-17 62.5 0.0 5.9e-17 62.2 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DUF4774 PF15999.5 NODE_42616_length_475_cov_64.315909_g34993_i0forward_frame_2 - 0.023 14.5 1.6 0.039 13.8 1.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4774) ABC_tran PF00005.27 NODE_42612_length_475_cov_78.727273_g34989_i0forward_frame_3 - 6.8e-08 33.1 0.0 1.2e-07 32.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 NODE_42612_length_475_cov_78.727273_g34989_i0forward_frame_3 - 0.0011 18.4 0.0 0.0015 18.0 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 NODE_42612_length_475_cov_78.727273_g34989_i0forward_frame_3 - 0.036 14.3 0.0 0.064 13.5 0.0 1.4 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Mito_carr PF00153.27 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_3 - 3.9e-09 36.3 0.1 3.9e-09 36.3 0.1 1.8 2 0 0 2 2 2 1 Mitochondrial carrier protein ETRAMP PF09716.10 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_3 - 5.7 7.1 12.1 9.1 6.4 12.1 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Mito_carr PF00153.27 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_2 - 4.7e-07 29.7 0.3 1e-06 28.6 0.2 1.9 1 1 0 1 1 1 1 Mitochondrial carrier protein HDA2-3 PF11496.8 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_2 - 0.038 13.2 6.3 1 8.5 4.1 2.0 1 1 1 2 2 2 0 Class II histone deacetylase complex subunits 2 and 3 DUF808 PF05661.12 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_2 - 0.18 10.8 0.3 0.24 10.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF808) PIP5K PF01504.18 NODE_42592_length_475_cov_306.809091_g34969_i1forward_frame_3 - 3.8e-16 59.1 0.7 5.9e-16 58.5 0.7 1.3 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase PIP5K PF01504.18 NODE_42591_length_475_cov_312.420455_g34969_i0forward_frame_3 - 3.8e-16 59.1 0.7 5.9e-16 58.5 0.7 1.3 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase TerY_C PF15616.6 NODE_42587_length_475_cov_815.170455_g34965_i0forward_frame_3 - 0.022 14.9 0.2 0.026 14.6 0.2 1.2 1 0 0 1 1 1 0 TerY-C metal binding domain SL4P PF17618.2 NODE_42587_length_475_cov_815.170455_g34965_i0forward_frame_2 - 0.074 13.1 0.2 0.074 13.1 0.2 1.8 2 0 0 2 2 2 0 Uncharacterized Strongylid L4 protein Myb_DNA-binding PF00249.31 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 1.2e-06 28.6 0.2 1.2e-06 28.6 0.2 1.7 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 1.6e-05 25.0 3.1 2e-05 24.7 1.9 1.8 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 0.0022 17.9 1.2 0.0039 17.0 1.2 1.4 1 0 0 1 1 1 1 Myb DNA-binding like SANT_DAMP1_like PF16282.5 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 0.017 15.3 1.2 0.078 13.2 0.7 2.3 1 1 1 2 2 2 0 SANT/Myb-like domain of DAMP1 Csm2_III-A PF03750.13 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 0.02 15.7 0.7 0.029 15.2 0.7 1.4 1 1 0 1 1 1 0 Csm2 Type III-A FXMR_C2 PF16098.5 NODE_42574_length_476_cov_2.099773_g34956_i0reverse_frame_2 - 0.049 14.1 4.4 0.067 13.7 3.8 1.5 1 1 0 1 1 1 0 Fragile X-related mental retardation protein C-terminal region 2 MCPsignal PF00015.21 NODE_42572_length_476_cov_2.353741_g34954_i0forward_frame_3 - 4.5e-46 156.8 19.5 5.9e-46 156.4 11.9 2.1 2 0 0 2 2 2 2 Methyl-accepting chemotaxis protein (MCP) signalling domain Flu_M1_C PF08289.11 NODE_42572_length_476_cov_2.353741_g34954_i0forward_frame_3 - 2.8 8.2 12.1 12 6.2 6.2 3.0 1 1 2 3 3 3 0 Influenza Matrix protein (M1) C-terminal domain SPATA1_C PF15743.5 NODE_42569_length_476_cov_2.464853_g34951_i0reverse_frame_2 - 0.54 10.3 8.1 0.05 13.7 3.4 1.6 2 0 0 2 2 2 0 Spermatogenesis-associated C-terminus DUF1889 PF08986.10 NODE_42567_length_476_cov_2.580499_g34949_i0forward_frame_3 - 1.9e-66 221.9 1.0 2.3e-66 221.6 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1889) DUF5381 PF17353.2 NODE_42559_length_476_cov_71.716553_g34941_i0reverse_frame_2 - 0.25 11.1 4.3 0.41 10.4 4.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5381) PRELI PF04707.14 NODE_42559_length_476_cov_71.716553_g34941_i0forward_frame_3 - 0.00033 20.5 0.3 0.00048 20.0 0.3 1.2 1 0 0 1 1 1 1 PRELI-like family Lip_prot_lig_C PF10437.9 NODE_42559_length_476_cov_71.716553_g34941_i0forward_frame_3 - 0.1 12.6 0.8 0.57 10.2 0.1 2.1 2 0 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus Ank_2 PF12796.7 NODE_42556_length_476_cov_90.888889_g34938_i0reverse_frame_3 - 5e-18 65.5 0.9 8.8e-13 48.7 0.1 1.7 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_42556_length_476_cov_90.888889_g34938_i0reverse_frame_3 - 2.1e-17 63.2 0.2 4.9e-08 33.4 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_42556_length_476_cov_90.888889_g34938_i0reverse_frame_3 - 1.8e-12 47.1 0.1 5.7e-05 23.4 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_42556_length_476_cov_90.888889_g34938_i0reverse_frame_3 - 2.6e-10 40.3 0.2 5.6e-05 23.3 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_42556_length_476_cov_90.888889_g34938_i0reverse_frame_3 - 1.3e-07 31.3 0.0 0.016 15.7 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat ARL2_Bind_BART PF11527.8 NODE_42553_length_476_cov_108.986395_g34935_i0reverse_frame_2 - 0.043 13.9 0.1 0.058 13.5 0.1 1.1 1 0 0 1 1 1 0 The ARF-like 2 binding protein BART FAD_binding_7 PF03441.14 NODE_42551_length_476_cov_113.730159_g34933_i0forward_frame_2 - 1.8e-31 109.2 0.0 2.4e-31 108.8 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase MIF4G_like PF09088.11 NODE_42551_length_476_cov_113.730159_g34933_i0forward_frame_2 - 0.022 14.6 0.3 0.031 14.0 0.3 1.2 1 0 0 1 1 1 0 MIF4G like TSGP1 PF07771.11 NODE_42542_length_476_cov_166.816327_g34924_i0reverse_frame_2 - 0.033 14.3 0.1 0.033 14.3 0.1 1.8 2 0 0 2 2 2 0 Tick salivary peptide group 1 TAXi_N PF14543.6 NODE_42542_length_476_cov_166.816327_g34924_i0reverse_frame_2 - 0.24 11.6 10.9 0.24 11.6 2.3 2.1 1 1 1 2 2 2 0 Xylanase inhibitor N-terminal DUF3835 PF12927.7 NODE_42539_length_476_cov_178.176871_g34921_i0forward_frame_2 - 0.66 10.9 4.4 1.8 9.5 4.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3835) DNA_pol_phi PF04931.13 NODE_42536_length_476_cov_244.018141_g34918_i0reverse_frame_3 - 1 7.4 35.6 1.4 7.0 35.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi MerC PF03203.14 NODE_42536_length_476_cov_244.018141_g34918_i0forward_frame_2 - 1.7 9.1 13.0 2.1 8.8 11.4 2.0 1 1 1 2 2 2 0 MerC mercury resistance protein PUMA PF15826.5 NODE_42529_length_476_cov_451.437642_g34911_i0forward_frame_2 - 0.0064 16.7 0.5 0.79 9.9 0.2 2.2 2 0 0 2 2 2 2 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis XhoI PF04555.13 NODE_42515_length_477_cov_1.703620_g34901_i0reverse_frame_2 - 0.00058 19.8 0.1 0.00077 19.4 0.1 1.1 1 0 0 1 1 1 1 Restriction endonuclease XhoI DUF1289 PF06945.13 NODE_42515_length_477_cov_1.703620_g34901_i0forward_frame_2 - 0.19 11.5 1.5 0.43 10.4 1.5 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) PNP_UDP_1 PF01048.20 NODE_42513_length_477_cov_2.063348_g34899_i0reverse_frame_3 - 3.6e-05 23.1 0.0 4.6e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Phosphorylase superfamily PCSK9_C1 PF18459.1 NODE_42503_length_477_cov_3.619910_g34889_i0forward_frame_3 - 0.011 15.8 2.2 0.02 15.0 1.5 1.7 2 0 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain UPF0564 PF10595.9 NODE_42500_length_477_cov_4.357466_g34886_i0reverse_frame_3 - 5.9e-05 22.3 10.5 5.9e-05 22.3 10.5 1.3 1 1 0 1 1 1 1 Uncharacterised protein family UPF0564 DUF963 PF06131.11 NODE_42498_length_477_cov_14.128959_g34884_i0reverse_frame_3 - 7.4 6.1 30.9 1.2 8.7 24.7 2.6 2 1 0 2 2 2 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) Tho1_MOS11_C PF18592.1 NODE_42490_length_477_cov_60.837104_g34876_i0reverse_frame_2 - 0.018 14.8 0.0 0.042 13.7 0.0 1.6 1 0 0 1 1 1 0 Tho1/MOS11 C-terminal domain S19 PF06756.11 NODE_42478_length_477_cov_89.013575_g34864_i0forward_frame_2 - 0.16 11.9 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 Chorion protein S19 C-terminal FAST_1 PF06743.15 NODE_42475_length_477_cov_101.572398_g34861_i0forward_frame_2 - 4.4e-10 39.4 1.0 0.017 15.0 0.1 3.9 1 1 3 4 4 4 3 FAST kinase-like protein, subdomain 1 GSCFA PF08885.11 NODE_42475_length_477_cov_101.572398_g34861_i0forward_frame_2 - 0.00066 19.4 0.3 0.001 18.8 0.2 1.3 2 0 0 2 2 2 1 GSCFA family DUF1601 PF07671.11 NODE_42475_length_477_cov_101.572398_g34861_i0forward_frame_2 - 0.13 12.1 0.9 18 5.3 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1601) RCC1_2 PF13540.6 NODE_42467_length_477_cov_121.529412_g34853_i0reverse_frame_3 - 3.7e-09 36.2 6.2 0.016 15.0 0.0 4.0 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat FLYWCH PF04500.16 NODE_42467_length_477_cov_121.529412_g34853_i0forward_frame_3 - 0.61 10.2 4.2 1.4 9.1 0.3 2.3 2 0 0 2 2 2 0 FLYWCH zinc finger domain CCSMST1 PF15013.6 NODE_42460_length_477_cov_190.047511_g34846_i0forward_frame_3 - 0.022 14.9 0.4 0.049 13.8 0.4 1.5 1 0 0 1 1 1 0 CCSMST1 family TAP35_44 PF07265.11 NODE_42460_length_477_cov_190.047511_g34846_i0forward_frame_3 - 4.3 7.4 4.9 0.52 10.3 0.6 1.9 2 1 0 2 2 2 0 Tapetum specific protein TAP35/TAP44 eIF3_subunit PF08597.10 NODE_42453_length_477_cov_323.545249_g34064_i1forward_frame_3 - 0.0021 18.0 4.8 0.003 17.5 4.8 1.2 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit PI3K_P85_iSH2 PF16454.5 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.0045 16.6 3.8 0.008 15.8 2.9 1.8 1 1 1 2 2 2 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain GIT_CC PF16559.5 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.0092 15.8 0.4 0.019 14.8 0.4 1.5 1 0 0 1 1 1 1 GIT coiled-coil Rho guanine nucleotide exchange factor DUF4407 PF14362.6 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.0093 15.3 0.4 0.0096 15.3 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) BLOC1_2 PF10046.9 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.013 15.8 1.9 1.5 9.1 0.4 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF2730 PF10805.8 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.03 14.4 0.7 0.3 11.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) LPP PF04728.13 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.033 14.6 1.5 0.063 13.7 1.5 1.4 1 0 0 1 1 1 0 Lipoprotein leucine-zipper ABC_tran_CTD PF16326.5 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.039 14.2 1.5 0.039 14.2 1.5 2.1 2 0 0 2 2 2 0 ABC transporter C-terminal domain ZapB PF06005.12 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.043 14.3 4.8 0.043 14.3 4.8 1.8 2 0 0 2 2 2 0 Cell division protein ZapB Lectin_N PF03954.14 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.062 13.0 0.2 0.12 12.1 0.2 1.4 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain FlaC_arch PF05377.11 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.083 13.3 5.5 0.92 9.9 0.6 2.6 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) IFP_35_N PF07334.13 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.21 11.7 5.1 2.5 8.2 3.2 2.4 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DivIC PF04977.15 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 1.4 8.7 8.3 0.96 9.3 5.0 2.4 2 1 0 2 2 2 0 Septum formation initiator DXP_redisom_C PF08436.12 NODE_42445_length_477_cov_26913.726244_g34832_i0forward_frame_2 - 0.12 12.6 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NADHdh_A3 PF14987.6 NODE_42444_length_477_cov_42161.101810_g30537_i11forward_frame_2 - 0.02 15.2 0.0 0.029 14.7 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 IGFBP PF00219.18 ORF99529 - 0.54 11.0 9.5 1 10.0 9.5 1.6 1 0 0 1 1 1 0 Insulin-like growth factor binding protein S_4TM PF18159.1 ORF99121 - 0.015 14.6 0.1 0.019 14.3 0.1 1.2 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Innexin PF00876.18 ORF99121 - 0.042 13.1 0.0 0.049 12.9 0.0 1.2 1 0 0 1 1 1 0 Innexin LapA_dom PF06305.11 ORF99121 - 0.19 11.6 5.9 1.2 9.0 2.6 2.6 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain EamA PF00892.20 ORF97190 - 0.00094 19.4 4.8 0.0012 19.1 4.8 1.1 1 0 0 1 1 1 1 EamA-like transporter family Phage_holin_4_2 PF04020.13 ORF97190 - 0.6 10.8 8.0 0.92 10.2 8.0 1.3 1 0 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV Phage_HK97_TLTM PF06120.11 ORF97 - 0.018 14.3 1.3 0.021 14.0 1.3 1.1 1 0 0 1 1 1 0 Tail length tape measure protein RabGAP-TBC PF00566.18 ORF96453 - 6.4e-18 65.2 2.2 8.8e-18 64.7 2.2 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF4846 PF16138.5 ORF96154 - 0.036 13.6 0.2 0.053 13.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (4846) PA PF02225.22 ORF96135 - 6.7e-07 29.2 0.0 9.6e-07 28.7 0.0 1.5 1 1 0 1 1 1 1 PA domain UQ_con PF00179.26 ORF95920 - 3.4e-35 120.7 0.0 4e-35 120.5 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme GRP PF07172.11 ORF95754 - 1.1 10.0 35.1 2.2 9.0 35.1 1.4 1 0 0 1 1 1 0 Glycine rich protein family GreA_GreB_N PF03449.15 ORF95724 - 4e-32 110.2 1.0 5.4e-32 109.8 1.0 1.2 1 0 0 1 1 1 1 Transcription elongation factor, N-terminal GreA_GreB PF01272.19 ORF95724 - 1e-29 102.3 0.3 1.4e-29 101.8 0.3 1.2 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term DDR_swiveling PF18427.1 ORF95724 - 0.0061 16.6 0.2 0.069 13.2 0.1 2.1 1 1 1 2 2 2 1 DD-reactivating factor swiveling domain Asp PF00026.23 ORF93962 - 3.9e-15 56.1 0.1 4.7e-15 55.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF1708 PF08101.11 ORF93749 - 0.047 12.8 0.0 0.063 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1708) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks138.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks138.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks138.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks138.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3203 PF11462.8 ORF91997 - 0.12 12.6 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3203) Ephrin_rec_like PF07699.13 ORF91366 - 0.072 12.9 0.1 0.15 11.9 0.1 1.5 1 0 0 1 1 1 0 Putative ephrin-receptor like Peptidase_S9 PF00326.21 ORF90356 - 2.2e-47 161.3 0.1 2.4e-47 161.2 0.1 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 ORF8939 - 1.3e-25 90.5 0.0 1.4e-25 90.4 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 ORF8939 - 6.8e-15 55.0 0.0 5.2e-08 32.5 0.0 2.0 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 ORF8939 - 4.1e-10 39.9 0.0 3.2e-05 23.9 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold DLH PF01738.18 ORF8939 - 9e-08 31.9 0.0 1.2e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 ORF8939 - 7.1e-07 29.1 0.1 1.8e-06 27.8 0.1 1.5 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF8939 - 4.4e-06 27.4 0.5 5.8e-06 27.1 0.5 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF8939 - 8.9e-06 25.3 0.0 0.0021 17.6 0.0 2.0 1 1 1 2 2 2 2 Prolyl oligopeptidase family Esterase PF00756.20 ORF8939 - 1.7e-05 24.6 0.0 1.9e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Putative esterase Esterase_phd PF10503.9 ORF8939 - 0.0001 21.9 0.4 0.00054 19.5 0.3 1.9 1 1 1 2 2 2 1 Esterase PHB depolymerase FSH1 PF03959.13 ORF8939 - 0.00021 21.0 0.0 0.00027 20.6 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_5 PF12695.7 ORF8939 - 0.0014 18.4 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family AXE1 PF05448.12 ORF8939 - 0.079 11.6 0.1 0.096 11.3 0.1 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Chlorophyllase2 PF12740.7 ORF8939 - 0.089 11.7 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase enzyme Abhydrolase_7 PF12715.7 ORF8939 - 0.14 11.4 0.0 0.17 11.1 0.0 1.1 1 0 0 1 1 1 0 Abhydrolase family Cutinase PF01083.22 ORF8939 - 0.15 12.0 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Cutinase BAAT_C PF08840.11 ORF8939 - 0.15 11.9 0.1 0.37 10.7 0.1 1.6 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal LIDHydrolase PF10230.9 ORF8939 - 0.17 11.4 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase TMEM51 PF15345.6 ORF89198 - 8.4 6.2 10.4 32 4.2 8.6 2.0 1 1 1 2 2 2 0 Transmembrane protein 51 DUF4441 PF14536.6 ORF88767 - 0.004 17.3 15.6 0.015 15.5 15.6 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4441) DUF629 PF04780.12 ORF88767 - 0.0049 15.4 0.2 0.0061 15.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF629) Peptidase_S55 PF05580.12 ORF88767 - 0.12 12.4 0.2 0.16 11.9 0.2 1.3 1 0 0 1 1 1 0 SpoIVB peptidase S55 PP2C PF00481.21 ORF88739 - 3.2e-17 63.0 0.3 3.7e-17 62.8 0.3 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF88739 - 5.3e-07 29.5 0.8 6.1e-07 29.3 0.8 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PAE PF03283.13 ORF88739 - 0.067 12.3 0.1 0.097 11.8 0.1 1.2 1 0 0 1 1 1 0 Pectinacetylesterase SpoIIE PF07228.12 ORF88739 - 0.079 12.9 0.4 0.15 11.9 0.4 1.5 1 1 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) DUF423 PF04241.15 ORF8862 - 0.0089 16.2 0.2 0.015 15.5 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF423) YgbB PF02542.16 ORF88210 - 5.9e-50 169.6 0.0 7.1e-50 169.3 0.0 1.0 1 0 0 1 1 1 1 YgbB family DUF2672 PF10878.8 ORF88210 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2672) LEA_2 PF03168.13 ORF88033 - 0.00018 21.9 0.0 0.00025 21.5 0.0 1.2 1 0 0 1 1 1 1 Late embryogenesis abundant protein Pcc1 PF09341.10 ORF88033 - 0.0061 16.7 0.2 0.015 15.4 0.2 1.6 1 0 0 1 1 1 1 Transcription factor Pcc1 HycH PF07450.11 ORF84912 - 3.4e-50 169.7 0.0 4e-50 169.5 0.0 1.0 1 0 0 1 1 1 1 Formate hydrogenlyase maturation protein HycH Carb_anhydrase PF00194.21 ORF84912 - 0.11 12.0 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic-type carbonic anhydrase Tmp39 PF10271.9 ORF84409 - 3.5e-05 23.0 0.8 4e-05 22.8 0.8 1.0 1 0 0 1 1 1 1 Putative transmembrane protein DUF1282 PF06930.12 ORF84409 - 0.0052 16.6 0.1 0.0069 16.2 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1282) EMC3_TMCO1 PF01956.16 ORF84409 - 0.0099 15.6 1.4 0.0099 15.6 1.4 1.9 1 1 1 2 2 2 1 Integral membrane protein EMC3/TMCO1-like DHHC PF01529.20 ORF84409 - 0.011 15.9 0.5 0.016 15.3 0.5 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF3328 PF11807.8 ORF84409 - 0.04 13.7 0.1 0.049 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) ETRAMP PF09716.10 ORF84409 - 0.04 14.0 3.7 0.063 13.3 3.4 1.5 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Zip PF02535.22 ORF84409 - 0.053 12.7 0.4 0.067 12.4 0.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter eIF3_subunit PF08597.10 ORF84409 - 0.27 11.1 16.5 0.38 10.6 16.5 1.2 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Laminin_II PF06009.12 ORF82769 - 0.012 15.6 2.1 0.016 15.3 2.1 1.3 1 0 0 1 1 1 0 Laminin Domain II Saccharop_dh_N PF04455.12 ORF82769 - 0.04 14.3 0.1 0.067 13.6 0.1 1.4 1 0 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region Tup_N PF08581.10 ORF82769 - 0.044 14.1 5.0 0.14 12.5 5.1 1.8 1 1 0 1 1 1 0 Tup N-terminal FliJ PF02050.16 ORF82769 - 0.064 13.5 2.7 0.17 12.1 1.9 1.9 1 1 1 2 2 2 0 Flagellar FliJ protein DUF3450 PF11932.8 ORF82769 - 0.096 12.0 2.5 0.13 11.6 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1043 PF06295.12 ORF82769 - 0.16 11.9 5.7 0.071 13.1 3.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) TMPIT PF07851.13 ORF82769 - 0.46 9.7 5.3 0.74 9.0 5.3 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF3552 PF12072.8 ORF82769 - 0.47 9.9 8.3 0.23 10.8 5.6 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) DUF1664 PF07889.12 ORF82769 - 0.5 10.4 5.3 0.81 9.7 5.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) YfhO PF09586.10 ORF82769 - 2.6 6.1 7.9 3 5.9 7.9 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO ANAPC3 PF12895.7 ORF82438 - 0.0031 17.7 0.0 0.0042 17.3 0.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 Acetyltransf_1 PF00583.25 ORF80607 - 1.4e-12 47.9 0.0 1.8e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 ORF80607 - 7.6e-11 42.2 0.0 1.4e-10 41.3 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF80607 - 8.1e-11 42.0 0.0 9.1e-11 41.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF80607 - 1.7e-08 34.8 0.0 2.2e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF80607 - 8.7e-05 22.4 0.2 0.00021 21.2 0.2 1.6 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_5 PF13444.6 ORF80607 - 0.002 18.8 0.1 0.0073 17.0 0.1 2.0 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF80607 - 0.097 12.8 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Presenilin PF01080.17 ORF80470 - 0.65 8.7 5.5 0.78 8.4 5.5 1.0 1 0 0 1 1 1 0 Presenilin DASH_Spc19 PF08287.11 ORF80470 - 1.3 8.9 10.1 1.3 9.0 9.4 1.3 1 1 0 1 1 1 0 Spc19 Ins_P5_2-kin PF06090.12 ORF78732 - 1.3e-09 37.9 0.1 1.5e-09 37.8 0.1 1.0 1 0 0 1 1 1 1 Inositol-pentakisphosphate 2-kinase PCSK9_C3 PF18463.1 ORF78068 - 1.1e-05 25.6 3.5 0.00071 19.8 0.1 2.2 2 0 0 2 2 2 2 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Spp-24 PF07448.11 ORF77632 - 5.3 7.3 8.8 5.4 7.3 0.5 3.3 2 2 1 3 3 3 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain Sugar_tr PF00083.24 ORF76825 - 1.1e-16 60.8 3.5 1.2e-16 60.7 3.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Flu_PB1 PF00602.17 ORF76825 - 0.21 9.6 0.2 0.25 9.4 0.2 1.0 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PB1 MFS_1 PF07690.16 ORF76825 - 5.7 5.8 14.3 43 2.9 5.4 1.9 1 1 1 2 2 2 0 Major Facilitator Superfamily Kelch_1 PF01344.25 ORF75771 - 2.1e-18 65.6 0.8 3.6e-06 26.5 0.2 3.4 3 1 0 3 3 3 3 Kelch motif Kelch_6 PF13964.6 ORF75771 - 1e-14 54.2 0.1 0.00081 19.6 0.1 3.3 2 1 1 3 3 3 3 Kelch motif Kelch_4 PF13418.6 ORF75771 - 5.2e-10 39.2 2.9 0.00051 20.0 0.0 4.1 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF75771 - 8e-08 32.1 2.4 0.017 15.1 0.2 3.3 3 1 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 ORF75771 - 1.9e-06 27.6 0.8 0.36 10.9 0.4 3.5 3 1 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 ORF75771 - 5.7e-06 26.5 0.5 0.53 10.7 0.0 3.8 3 1 0 3 3 3 2 Galactose oxidase, central domain RNase_E_G PF10150.9 ORF74290 - 0.29 10.5 5.6 0.34 10.3 5.6 1.2 1 0 0 1 1 1 0 Ribonuclease E/G family Patched PF02460.18 ORF74290 - 1.2 7.2 5.8 1.4 6.9 5.8 1.0 1 0 0 1 1 1 0 Patched family Mer2 PF09074.10 ORF74290 - 1.9 8.3 8.6 2.5 7.9 8.6 1.1 1 0 0 1 1 1 0 Mer2 DUF349 PF03993.12 ORF74290 - 8.6 6.7 9.4 1.6 9.1 4.5 2.2 2 1 0 2 2 2 0 Domain of Unknown Function (DUF349) DSPn PF14671.6 ORF73733 - 2.5e-13 50.7 0.3 5.9e-13 49.5 0.1 1.7 2 0 0 2 2 2 1 Dual specificity protein phosphatase, N-terminal half Spp-24 PF07448.11 ORF73455 - 5.3 7.3 8.8 5.4 7.3 0.5 3.3 2 2 1 3 3 3 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain DUF1859 PF08948.10 ORF73294 - 0.1 12.5 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1859) DUF1995 PF09353.10 ORF71170 - 0.05 13.6 0.1 0.058 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1995) ArnB_C PF18677.1 ORF68538 - 0.036 14.2 0.4 0.036 14.2 0.4 1.5 2 0 0 2 2 2 0 Archaellum regulatory network B, C-terminal domain CSD PF00313.22 ORF68181 - 8.7e-12 44.7 0.0 1.2e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF68181 - 0.087 12.5 0.3 0.17 11.6 0.3 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain ArfGap PF01412.18 ORF67489 - 1.2e-33 115.6 0.6 1.5e-33 115.4 0.6 1.1 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf Zn_Tnp_IS1595 PF12760.7 ORF67489 - 0.045 13.7 0.4 0.071 13.1 0.4 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-C3HC4_3 PF13920.6 ORF67489 - 0.17 11.7 2.8 0.27 11.1 2.8 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Paired_CXXCH_1 PF09699.10 ORF67489 - 0.63 9.8 3.3 1.6 8.6 0.3 2.4 1 1 1 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) INTS5_N PF14837.6 ORF67276 - 0.062 12.9 0.2 0.088 12.4 0.2 1.2 1 0 0 1 1 1 0 Integrator complex subunit 5 N-terminus Trp_Tyr_perm PF03222.13 ORF6571 - 4.3e-53 180.8 1.6 4.8e-53 180.6 1.6 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family TerC PF03741.16 ORF64516 - 8.6e-07 28.8 1.3 8.6e-07 28.8 1.3 1.6 2 0 0 2 2 2 1 Integral membrane protein TerC family Herpes_LMP1 PF05297.11 ORF64516 - 0.00042 19.6 7.7 0.00053 19.3 7.7 1.0 1 0 0 1 1 1 1 Herpesvirus latent membrane protein 1 (LMP1) YqhR PF11085.8 ORF64516 - 0.13 12.2 3.3 0.059 13.3 1.1 1.5 1 1 0 1 1 1 0 Conserved membrane protein YqhR DPM3 PF08285.11 ORF64516 - 9.5 6.5 8.8 2.7 8.3 0.6 2.2 1 1 1 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Mago_nashi PF02792.14 ORF6211 - 2.1e-64 215.9 1.9 2.4e-64 215.8 1.9 1.0 1 0 0 1 1 1 1 Mago nashi protein Lipoprotein_9 PF03180.14 ORF61361 - 1.7e-59 200.8 0.0 1.9e-59 200.7 0.0 1.0 1 0 0 1 1 1 1 NLPA lipoprotein PTSIIB_sorb PF03830.15 ORF61012 - 1.8e-48 164.5 0.4 2e-48 164.4 0.4 1.0 1 0 0 1 1 1 1 PTS system sorbose subfamily IIB component Talin_middle PF09141.10 ORF59994 - 0.044 13.8 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 Talin, middle domain GNT-I PF03071.15 ORF59213 - 0.00058 18.7 0.0 0.00071 18.5 0.0 1.0 1 0 0 1 1 1 1 GNT-I family Glyco_transf_18 PF15024.6 ORF59213 - 0.035 12.7 0.0 0.044 12.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 18 Sigma54_CBD PF04963.13 ORF59213 - 0.16 11.8 0.0 0.31 10.9 0.0 1.5 1 1 0 1 1 1 0 Sigma-54 factor, core binding domain ENTH PF01417.20 ORF56623 - 0.0019 18.2 0.2 0.0032 17.5 0.2 1.5 1 1 0 1 1 1 1 ENTH domain DUF5603 PF18231.1 ORF56623 - 0.096 13.0 0.0 0.16 12.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5603) Aldo_ket_red PF00248.21 ORF55356 - 1.2e-25 90.3 1.6 1.9e-24 86.4 1.6 1.9 1 1 0 1 1 1 1 Aldo/keto reductase family ThiF PF00899.21 ORF54799 - 1.1e-17 64.2 0.0 1.3e-17 64.0 0.0 1.0 1 0 0 1 1 1 1 ThiF family CHCH PF06747.13 ORF54090 - 0.0064 16.6 11.5 0.19 11.9 4.2 3.0 3 0 0 3 3 3 2 CHCH domain CX9C PF16860.5 ORF54090 - 0.089 12.8 4.8 0.22 11.6 0.1 2.7 4 0 0 4 4 4 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, CSD PF00313.22 ORF53936 - 8.7e-12 44.7 0.0 1.2e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF53936 - 0.087 12.5 0.3 0.17 11.6 0.3 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain EF-hand_6 PF13405.6 ORF53935 - 2e-05 24.2 0.5 0.00032 20.4 0.0 2.7 3 0 0 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 ORF53935 - 0.00091 19.6 0.1 0.053 14.0 0.1 2.4 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF53935 - 0.001 18.4 0.0 0.0043 16.5 0.0 2.1 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF53935 - 0.14 11.7 0.0 0.33 10.5 0.0 1.7 1 0 0 1 1 1 0 EF hand EF-hand_8 PF13833.6 ORF53935 - 0.18 11.7 0.1 6.2 6.8 0.0 2.6 2 1 0 2 2 2 0 EF-hand domain pair Tenui_NS3 PF05310.12 ORF51843 - 0.061 13.4 0.3 0.074 13.2 0.3 1.1 1 0 0 1 1 1 0 Tenuivirus movement protein CSD PF00313.22 ORF51666 - 8.7e-12 44.7 0.0 1.2e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF51666 - 0.087 12.5 0.3 0.17 11.6 0.3 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain GPP34 PF05719.11 ORF51657 - 0.00064 19.8 0.5 0.00076 19.6 0.5 1.1 1 0 0 1 1 1 1 Golgi phosphoprotein 3 (GPP34) CutA1 PF03091.15 ORF51007 - 1e-13 51.0 0.2 1.4e-13 50.5 0.2 1.1 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein PelG PF16933.5 ORF50216 - 0.016 14.1 2.0 0.028 13.3 1.2 1.6 1 1 1 2 2 2 0 Putative exopolysaccharide Exporter (EPS-E) FA_desaturase PF00487.24 ORF50216 - 0.35 10.7 2.3 0.36 10.6 0.2 1.8 1 1 1 2 2 2 0 Fatty acid desaturase Mago_nashi PF02792.14 ORF502 - 2.1e-64 215.9 1.9 2.4e-64 215.8 1.9 1.0 1 0 0 1 1 1 1 Mago nashi protein MAM PF00629.23 ORF49241 - 0.032 14.2 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 MAM domain, meprin/A5/mu Spp-24 PF07448.11 ORF4919 - 5.3 7.3 8.8 5.4 7.3 0.5 3.3 2 2 1 3 3 3 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain SLC12 PF03522.15 ORF488 - 6e-06 25.5 3.8 1.8e-05 23.9 3.9 1.7 1 1 0 1 1 1 1 Solute carrier family 12 UPF0020 PF01170.18 ORF488 - 0.0035 17.0 0.3 0.0044 16.7 0.3 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 BRAP2 PF07576.12 ORF488 - 0.03 14.5 0.3 0.069 13.4 0.0 1.7 2 0 0 2 2 2 0 BRCA1-associated protein 2 Kelch_4 PF13418.6 ORF48542 - 0.00062 19.7 0.1 6 7.0 0.0 3.3 3 0 0 3 3 3 3 Galactose oxidase, central domain Prenyltrans PF00432.21 ORF48542 - 0.088 12.6 1.0 0.24 11.2 0.1 2.1 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat CheZ PF04344.13 ORF48390 - 0.023 14.6 0.0 0.032 14.2 0.0 1.1 1 0 0 1 1 1 0 Chemotaxis phosphatase, CheZ DNA_Packaging PF11053.8 ORF48390 - 0.065 13.1 0.0 0.08 12.8 0.0 1.1 1 0 0 1 1 1 0 Terminase DNA packaging enzyme TMP_2 PF06791.13 ORF48390 - 0.1 12.3 0.6 0.14 11.8 0.6 1.2 1 0 0 1 1 1 0 Prophage tail length tape measure protein DUF3037 PF11236.8 ORF48390 - 0.15 12.5 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3037) Laminin_II PF06009.12 ORF47301 - 0.012 15.6 2.1 0.016 15.3 2.1 1.3 1 0 0 1 1 1 0 Laminin Domain II Saccharop_dh_N PF04455.12 ORF47301 - 0.04 14.3 0.1 0.067 13.6 0.1 1.4 1 0 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region Tup_N PF08581.10 ORF47301 - 0.044 14.1 5.0 0.14 12.5 5.1 1.8 1 1 0 1 1 1 0 Tup N-terminal FliJ PF02050.16 ORF47301 - 0.064 13.5 2.7 0.17 12.1 1.9 1.9 1 1 1 2 2 2 0 Flagellar FliJ protein DUF3450 PF11932.8 ORF47301 - 0.096 12.0 2.5 0.13 11.6 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1043 PF06295.12 ORF47301 - 0.16 11.9 5.7 0.071 13.1 3.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) TMPIT PF07851.13 ORF47301 - 0.46 9.7 5.3 0.74 9.0 5.3 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF3552 PF12072.8 ORF47301 - 0.47 9.9 8.3 0.23 10.8 5.6 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) DUF1664 PF07889.12 ORF47301 - 0.5 10.4 5.3 0.81 9.7 5.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) YfhO PF09586.10 ORF47301 - 2.6 6.1 7.9 3 5.9 7.9 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO CSD PF00313.22 ORF46985 - 8.7e-12 44.7 0.0 1.2e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF46985 - 0.087 12.5 0.3 0.17 11.6 0.3 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain Acyl_transf_3 PF01757.22 ORF45978 - 0.0023 17.1 7.3 0.0026 16.9 7.3 1.0 1 0 0 1 1 1 1 Acyltransferase family MASE3 PF17159.4 ORF45978 - 0.0024 17.5 1.5 0.0024 17.5 1.5 1.5 1 1 0 1 1 1 1 Membrane-associated sensor domain FeoB_associated PF12669.7 ORF45978 - 0.11 12.9 1.2 2 8.9 0.0 3.0 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein DUF4181 PF13789.6 ORF45978 - 0.15 12.4 11.8 0.98 9.7 5.5 3.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4181) MFS_Mycoplasma PF07672.13 ORF45978 - 0.16 11.3 8.5 0.75 9.0 0.2 2.7 1 1 2 3 3 3 0 Mycoplasma MFS transporter ODV-E18 PF10717.9 ORF45978 - 0.46 10.4 1.8 15 5.5 0.0 2.7 3 0 0 3 3 3 0 Occlusion-derived virus envelope protein ODV-E18 DUF2304 PF10066.9 ORF45978 - 2.2 8.5 12.2 25 5.1 9.2 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Tetraspanin PF00335.20 ORF45978 - 6.8 6.3 11.3 14 5.3 11.3 1.6 1 1 0 1 1 1 0 Tetraspanin family TarH PF02203.15 ORF45393 - 0.012 15.5 0.9 0.13 12.2 0.7 2.2 1 1 1 2 2 2 0 Tar ligand binding domain homologue YtxH PF12732.7 ORF45393 - 0.073 13.6 1.1 0.18 12.3 1.1 1.8 1 1 0 1 1 1 0 YtxH-like protein Virulence_fact PF13769.6 ORF45393 - 0.13 12.5 2.5 0.27 11.5 2.5 1.6 1 0 0 1 1 1 0 Virulence factor PfkB PF00294.24 ORF44560 - 9.6e-19 67.8 0.1 1.1e-18 67.6 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Fer2_3 PF13085.6 ORF44560 - 0.13 12.3 0.4 0.69 10.0 0.2 2.0 1 1 1 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain FucT_N PF18025.1 ORF42602 - 0.02 15.4 0.7 0.079 13.4 0.3 2.0 2 0 0 2 2 2 0 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain DUF5442 PF17514.2 ORF42602 - 0.047 13.9 0.8 0.15 12.3 0.1 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5442) Methyltransf_16 PF10294.9 ORF42039 - 1.9e-18 66.8 0.1 2.4e-18 66.5 0.1 1.0 1 0 0 1 1 1 1 Lysine methyltransferase PrmA PF06325.13 ORF42039 - 4.5e-06 26.3 0.1 5e-06 26.1 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 ORF42039 - 5.4e-06 27.0 0.1 7.2e-06 26.6 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF42039 - 6.4e-06 26.0 0.1 7.9e-06 25.7 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF42039 - 4.1e-05 23.2 0.0 5e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 ORF42039 - 0.0029 18.2 0.1 0.0044 17.6 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 ORF42039 - 0.011 15.4 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 NNMT_PNMT_TEMT PF01234.17 ORF42039 - 0.025 13.7 0.0 0.034 13.3 0.0 1.2 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family Methyltransf_9 PF08003.11 ORF42039 - 0.17 10.8 0.0 0.2 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Met_10 PF02475.16 ORF42039 - 0.18 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein GRP PF07172.11 ORF40288 - 1.1 10.0 35.1 2.2 9.0 35.1 1.4 1 0 0 1 1 1 0 Glycine rich protein family GTPase_binding PF09027.10 ORF38705 - 0.12 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 GTPase binding IFT57 PF10498.9 ORF38328 - 9.1e-34 117.0 0.0 1e-33 116.9 0.0 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 CSD PF00313.22 ORF3766 - 8.7e-12 44.7 0.0 1.2e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF3766 - 0.087 12.5 0.3 0.17 11.6 0.3 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain GRP PF07172.11 ORF36060 - 1.1 10.0 35.1 2.2 9.0 35.1 1.4 1 0 0 1 1 1 0 Glycine rich protein family Pkinase PF00069.25 ORF35895 - 1.6e-23 83.4 0.0 1.8e-23 83.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF35895 - 0.027 13.7 0.0 0.033 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase PNP_UDP_1 PF01048.20 ORF34932 - 8.7e-10 38.3 0.1 1.1e-09 37.9 0.1 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily GRP PF07172.11 ORF34681 - 1.1 10.0 35.1 2.2 9.0 35.1 1.4 1 0 0 1 1 1 0 Glycine rich protein family Cytochrom_C_asm PF01578.20 ORF33814 - 0.0014 18.4 0.1 0.0014 18.4 0.1 1.2 1 0 0 1 1 1 1 Cytochrome C assembly protein Trypan_PARP PF05887.11 ORF33814 - 0.042 13.8 0.0 0.066 13.2 0.0 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) 2-Hacid_dh_C PF02826.19 ORF33814 - 0.14 11.5 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF4051 PF13260.6 ORF32321 - 0.0013 18.4 0.1 0.0024 17.6 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF4051) Ribosomal_L21e PF01157.18 ORF32146 - 2.2e-30 104.5 4.6 2.2e-30 104.5 4.6 1.5 1 1 1 2 2 2 1 Ribosomal protein L21e Band_7 PF01145.25 ORF31426 - 7.4e-10 39.1 1.6 9.8e-10 38.7 0.9 1.5 2 0 0 2 2 2 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 ORF31426 - 0.00049 19.9 0.1 0.00085 19.1 0.1 1.4 1 0 0 1 1 1 1 SPFH domain-Band 7 family Iron_permease PF04120.12 ORF31426 - 0.29 10.9 5.2 0.12 12.1 2.8 1.6 2 0 0 2 2 2 0 Low affinity iron permease 2OG-FeII_Oxy_3 PF13640.6 ORF30463 - 2.6e-09 37.8 0.0 4.1e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily BatD PF13584.6 ORF3003 - 0.041 12.7 0.2 0.044 12.6 0.2 1.1 1 0 0 1 1 1 0 Oxygen tolerance MA-Mit PF09245.10 ORF29878 - 0.015 14.7 1.1 0.021 14.3 0.9 1.3 1 1 0 1 1 1 0 Mycoplasma arthritidis-derived mitogen Phage_int_SAM_1 PF02899.17 ORF29510 - 0.084 13.2 0.7 0.17 12.2 0.7 1.4 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Peptidase_M14 PF00246.24 ORF28834 - 1.6e-05 24.8 0.1 0.00034 20.5 0.1 2.5 1 1 0 1 1 1 1 Zinc carboxypeptidase zf-C2H2_10 PF16588.5 ORF28834 - 0.25 11.1 1.8 14 5.5 0.1 2.5 2 0 0 2 2 2 0 C2H2 zinc-finger DUF4632 PF15451.6 ORF27745 - 0.045 13.8 0.9 23 5.1 0.1 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4632) DUF2207 PF09972.9 ORF26771 - 0.069 11.9 0.1 0.085 11.6 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) OppC_N PF12911.7 ORF26771 - 0.21 11.6 4.5 1.5 8.8 0.9 2.4 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C TarH PF02203.15 ORF25513 - 0.012 15.5 0.9 0.13 12.2 0.7 2.2 1 1 1 2 2 2 0 Tar ligand binding domain homologue YtxH PF12732.7 ORF25513 - 0.073 13.6 1.1 0.18 12.3 1.1 1.8 1 1 0 1 1 1 0 YtxH-like protein Virulence_fact PF13769.6 ORF25513 - 0.13 12.5 2.5 0.27 11.5 2.5 1.6 1 0 0 1 1 1 0 Virulence factor WD40 PF00400.32 ORF24849 - 3.4e-13 49.8 10.6 0.0013 19.5 1.0 3.2 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF24849 - 0.0018 18.5 0.4 1.3 9.3 0.1 2.9 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF24849 - 0.0022 16.7 3.1 0.044 12.4 0.0 2.8 1 1 1 3 3 3 2 Nucleoporin Nup120/160 MFS_1 PF07690.16 ORF24731 - 4.6e-10 39.0 23.3 5.3e-10 38.8 23.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF24731 - 2.2e-09 36.7 8.6 2.4e-09 36.6 8.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter NMN_transporter PF04973.12 ORF24731 - 0.61 10.0 9.8 4.6 7.2 3.3 2.2 2 0 0 2 2 2 0 Nicotinamide mononucleotide transporter DUF3742 PF12553.8 ORF2347 - 0.085 13.0 0.2 0.11 12.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) Laminin_II PF06009.12 ORF21896 - 0.012 15.6 2.1 0.016 15.3 2.1 1.3 1 0 0 1 1 1 0 Laminin Domain II Saccharop_dh_N PF04455.12 ORF21896 - 0.04 14.3 0.1 0.067 13.6 0.1 1.4 1 0 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region Tup_N PF08581.10 ORF21896 - 0.044 14.1 5.0 0.14 12.5 5.1 1.8 1 1 0 1 1 1 0 Tup N-terminal FliJ PF02050.16 ORF21896 - 0.064 13.5 2.7 0.17 12.1 1.9 1.9 1 1 1 2 2 2 0 Flagellar FliJ protein DUF3450 PF11932.8 ORF21896 - 0.096 12.0 2.5 0.13 11.6 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1043 PF06295.12 ORF21896 - 0.16 11.9 5.7 0.071 13.1 3.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) TMPIT PF07851.13 ORF21896 - 0.46 9.7 5.3 0.74 9.0 5.3 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF3552 PF12072.8 ORF21896 - 0.47 9.9 8.3 0.23 10.8 5.6 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) DUF1664 PF07889.12 ORF21896 - 0.5 10.4 5.3 0.81 9.7 5.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) YfhO PF09586.10 ORF21896 - 2.6 6.1 7.9 3 5.9 7.9 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Bax1-I PF01027.20 ORF21316 - 8.9e-20 71.4 29.8 9.7e-20 71.3 29.8 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF21316 - 0.0034 17.0 21.4 0.0046 16.6 21.4 1.1 1 0 0 1 1 1 1 Bax inhibitor 1 like DUF2070 PF09843.9 ORF21316 - 0.12 10.6 22.0 0.14 10.4 22.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) CTP_transf_1 PF01148.20 ORF21316 - 3.6 7.3 22.8 0.17 11.6 17.5 1.5 2 0 0 2 2 2 0 Cytidylyltransferase family Peptidase_M50B PF13398.6 ORF21316 - 5.5 6.6 20.0 5.4 6.6 18.6 1.7 1 1 1 2 2 2 0 Peptidase M50B-like Pox_A14 PF05767.12 ORF21316 - 7.2 6.8 23.3 5 7.3 10.3 2.7 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 SKA2 PF16740.5 ORF19474 - 0.17 11.7 10.1 0.71 9.7 0.1 2.5 2 1 1 3 3 3 0 Spindle and kinetochore-associated protein 2 Pkinase PF00069.25 ORF19435 - 1.5e-45 155.7 0.2 1.6e-45 155.5 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF19435 - 1.3e-24 86.9 0.1 1.4e-24 86.8 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF19435 - 2.4e-07 29.9 0.0 3.4e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF19435 - 0.0012 18.0 0.0 0.0016 17.6 0.0 1.2 1 0 0 1 1 1 1 Seadornavirus VP7 Kinase-like PF14531.6 ORF19435 - 0.0013 18.1 0.0 0.0017 17.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like YukC PF10140.9 ORF19435 - 0.023 13.5 0.0 0.025 13.4 0.0 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Haspin_kinase PF12330.8 ORF19435 - 0.03 13.3 0.2 0.036 13.0 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 ORF19435 - 0.047 13.0 0.2 0.095 12.0 0.2 1.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family PTS_2-RNA PF01885.16 ORF19435 - 0.082 13.0 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family AMMECR1 PF01871.17 ORF17334 - 2.1e-37 128.3 0.0 2.4e-37 128.1 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 GRP PF07172.11 ORF13987 - 1.1 10.0 35.1 2.2 9.0 35.1 1.4 1 0 0 1 1 1 0 Glycine rich protein family DUF3577 PF12101.8 ORF1314 - 0.062 13.1 0.0 0.086 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3577) Syja_N PF02383.18 ORF12301 - 0.06 12.7 0.1 0.062 12.6 0.1 1.1 1 0 0 1 1 1 0 SacI homology domain DUF1002 PF06207.11 ORF112114 - 0.11 12.0 6.5 1.4 8.4 1.4 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF1002) HTH_Tnp_Mu_1 PF02316.16 ORF111305 - 0.059 13.5 0.9 0.095 12.9 0.9 1.5 1 1 0 1 1 1 0 Mu DNA-binding domain Ycf70 PF17382.2 ORF111305 - 0.12 12.8 0.4 0.12 12.8 0.4 2.3 1 1 2 3 3 3 0 Uncharacterized Ycf70-like Nop25 PF09805.9 ORF111305 - 0.32 11.5 9.6 0.46 11.0 9.6 1.3 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) GRP PF07172.11 ORF110439 - 1.1 10.0 35.1 2.2 9.0 35.1 1.4 1 0 0 1 1 1 0 Glycine rich protein family HTH_40 PF14493.6 ORF11043 - 0.002 18.6 2.4 0.0084 16.5 2.4 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain Streptin-Immun PF11083.8 ORF11043 - 0.097 13.1 1.9 0.19 12.2 1.9 1.4 1 0 0 1 1 1 0 Lantibiotic streptin immunity protein zf-C4H2 PF10146.9 ORF11043 - 1.2 9.5 4.1 1.7 8.9 4.1 1.4 1 1 0 1 1 1 0 Zinc finger-containing protein HAMP PF00672.25 ORF110148 - 0.00079 19.8 0.5 0.0013 19.1 0.5 1.4 1 0 0 1 1 1 1 HAMP domain DUF4834 PF16118.5 ORF10960 - 0.0042 18.0 0.2 0.0062 17.5 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) ASFV_J13L PF05568.11 ORF10960 - 0.0071 16.1 0.0 0.0083 15.9 0.0 1.2 1 0 0 1 1 1 1 African swine fever virus J13L protein ECSCR PF15820.5 ORF10960 - 0.023 14.5 0.3 0.036 13.9 0.3 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator OAD_gamma PF04277.13 ORF10960 - 0.031 14.9 0.3 0.05 14.2 0.3 1.5 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Pilin_N PF07790.11 ORF10960 - 0.055 14.4 0.4 0.11 13.5 0.2 1.5 2 0 0 2 2 2 0 Archaeal Type IV pilin, N-terminal TMEM154 PF15102.6 ORF10960 - 0.091 12.7 0.9 0.13 12.1 0.6 1.5 1 1 0 1 1 1 0 TMEM154 protein family Dockerin_1 PF00404.18 ORF10960 - 1.5 9.1 4.7 0.44 10.8 0.4 2.2 2 1 1 3 3 3 0 Dockerin type I domain Orf78 PF06024.12 ORF10960 - 3.3 8.1 5.3 1.2 9.4 2.0 1.8 1 1 1 2 2 2 0 Orf78 (ac78) Snf7 PF03357.21 ORF109288 - 1.7e-16 60.3 26.5 2e-16 60.1 26.2 1.3 1 1 0 1 1 1 1 Snf7 RNA_pol_Rpb1_5 PF04998.17 ORF109288 - 0.27 10.6 7.4 0.32 10.4 7.4 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 Fer4_8 PF13183.6 ORF108196 - 0.063 13.7 3.5 0.087 13.3 2.7 1.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Ferlin_C PF16165.5 ORF108005 - 0.00027 20.9 0.0 0.00035 20.5 0.0 1.2 1 0 0 1 1 1 1 Ferlin C-terminus C2 PF00168.30 ORF108005 - 0.0017 18.6 0.0 0.0027 18.0 0.0 1.3 1 0 0 1 1 1 1 C2 domain Bax1-I PF01027.20 ORF106040 - 8.9e-20 71.4 29.8 9.7e-20 71.3 29.8 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF106040 - 0.0034 17.0 21.4 0.0046 16.6 21.4 1.1 1 0 0 1 1 1 1 Bax inhibitor 1 like DUF2070 PF09843.9 ORF106040 - 0.12 10.6 22.0 0.14 10.4 22.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) CTP_transf_1 PF01148.20 ORF106040 - 3.6 7.3 22.8 0.17 11.6 17.5 1.5 2 0 0 2 2 2 0 Cytidylyltransferase family Peptidase_M50B PF13398.6 ORF106040 - 5.5 6.6 20.0 5.4 6.6 18.6 1.7 1 1 1 2 2 2 0 Peptidase M50B-like Pox_A14 PF05767.12 ORF106040 - 7.2 6.8 23.3 5 7.3 10.3 2.7 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 GRP PF07172.11 ORF10588 - 1.1 10.0 35.1 2.2 9.0 35.1 1.4 1 0 0 1 1 1 0 Glycine rich protein family Cytochrom_C_asm PF01578.20 ORF105168 - 0.0014 18.4 0.1 0.0014 18.4 0.1 1.2 1 0 0 1 1 1 1 Cytochrome C assembly protein Trypan_PARP PF05887.11 ORF105168 - 0.042 13.8 0.0 0.066 13.2 0.0 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) 2-Hacid_dh_C PF02826.19 ORF105168 - 0.14 11.5 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHCH PF06747.13 ORF104783 - 0.0064 16.6 11.5 0.19 11.9 4.2 3.0 3 0 0 3 3 3 2 CHCH domain CX9C PF16860.5 ORF104783 - 0.089 12.8 4.8 0.22 11.6 0.1 2.7 4 0 0 4 4 4 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Rnf-Nqr PF02508.14 ORF103610 - 1.3e-33 116.4 6.6 1.5e-33 116.2 6.6 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein CitMHS PF03600.16 ORF10296 - 3.7e-13 49.4 15.5 8.2e-13 48.2 15.5 1.5 1 1 0 1 1 1 1 Citrate transporter Na_sulph_symp PF00939.19 ORF10296 - 2e-07 30.5 9.8 2.8e-07 29.9 9.8 1.2 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region Pox_I5 PF04713.12 ORF10296 - 0.055 13.5 0.4 1.5 8.9 0.0 2.3 2 0 0 2 2 2 0 Poxvirus protein I5 Abhydrolase_3 PF07859.13 ORF102358 - 4e-11 43.2 0.0 4.5e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Alba PF01918.21 ORF101380 - 6.9e-16 57.8 0.1 1e-15 57.3 0.1 1.3 1 0 0 1 1 1 1 Alba Leu_leader PF08054.11 NODE_43022_length_469_cov_1.320276_g35370_i0forward_frame_1 - 3.7e-13 48.8 4.1 6.6e-13 48.0 4.1 1.5 1 0 0 1 1 1 1 Leucine operon leader peptide CLN3 PF02487.17 NODE_43017_length_469_cov_2.331797_g35366_i0reverse_frame_1 - 2.5e-13 49.9 4.6 2.8e-13 49.7 4.6 1.0 1 0 0 1 1 1 1 CLN3 protein Phage_holin_3_6 PF07332.11 NODE_43017_length_469_cov_2.331797_g35366_i0reverse_frame_1 - 0.76 9.8 4.1 1.4 9.0 4.1 1.4 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III PX PF00787.24 NODE_43016_length_469_cov_2.377880_g35365_i0reverse_frame_1 - 6.4e-10 39.0 0.5 9.8e-10 38.4 0.5 1.3 1 0 0 1 1 1 1 PX domain CHD5 PF04420.14 NODE_43011_length_469_cov_3.172811_g35360_i0reverse_frame_1 - 0.25 11.2 2.1 0.42 10.5 2.1 1.4 1 1 0 1 1 1 0 CHD5-like protein HTH_23 PF13384.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 1.6e-05 24.5 0.1 2.7e-05 23.8 0.1 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 4.3e-05 23.4 0.0 7.3e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 8.1e-05 22.7 0.3 0.00016 21.8 0.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.0012 18.9 0.0 0.0018 18.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Mor PF08765.11 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.0072 16.3 0.0 0.0095 15.9 0.0 1.2 1 0 0 1 1 1 1 Mor transcription activator family HTH_IclR PF09339.10 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.0078 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_26 PF13443.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.01 16.3 0.0 0.018 15.5 0.0 1.3 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_11 PF08279.12 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.03 14.3 0.0 0.044 13.7 0.0 1.3 1 0 0 1 1 1 0 HTH domain HTH_17 PF12728.7 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.042 14.0 0.1 0.072 13.3 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_AlpA PF05930.12 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.045 13.6 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) HTH_Tnp_IS630 PF01710.16 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.07 13.2 0.1 0.097 12.7 0.1 1.1 1 0 0 1 1 1 0 Transposase HTH_Tnp_1 PF01527.20 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.074 13.4 0.1 0.12 12.7 0.1 1.3 1 0 0 1 1 1 0 Transposase TraH PF06122.11 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 0.0024 17.2 10.7 0.0033 16.8 10.7 1.1 1 0 0 1 1 1 1 Conjugative relaxosome accessory transposon protein MAD PF05557.13 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 0.007 14.8 9.3 0.0084 14.5 9.3 1.1 1 0 0 1 1 1 1 Mitotic checkpoint protein MFS_Mycoplasma PF07672.13 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 0.031 13.6 1.9 0.038 13.3 1.9 1.1 1 0 0 1 1 1 0 Mycoplasma MFS transporter HTH_AsnC-type PF13404.6 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 0.74 9.7 3.1 4.9 7.1 0.5 2.9 1 1 2 3 3 3 0 AsnC-type helix-turn-helix domain TFIIA PF03153.13 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 6.8 6.6 13.3 7 6.5 13.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit zf-CCHC_6 PF15288.6 NODE_43002_length_469_cov_6.057604_g35351_i0forward_frame_1 - 0.12 12.2 0.1 0.23 11.3 0.1 1.4 1 0 0 1 1 1 0 Zinc knuckle Cyc-maltodext_N PF09087.11 NODE_43000_length_469_cov_8.974654_g35349_i0forward_frame_1 - 0.064 13.5 1.5 0.14 12.4 1.5 1.6 1 0 0 1 1 1 0 Cyclomaltodextrinase, N-terminal Acetyltransf_15 PF17013.5 NODE_42990_length_469_cov_81.460829_g35339_i0reverse_frame_1 - 0.15 11.5 0.6 0.18 11.3 0.6 1.1 1 0 0 1 1 1 0 Putative acetyl-transferase Actin PF00022.19 NODE_42979_length_469_cov_113.124424_g35328_i0reverse_frame_1 - 1.7e-14 53.2 0.0 2e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Actin MreB_Mbl PF06723.13 NODE_42979_length_469_cov_113.124424_g35328_i0reverse_frame_1 - 0.021 13.7 0.0 0.027 13.3 0.0 1.1 1 0 0 1 1 1 0 MreB/Mbl protein DUF523 PF04463.12 NODE_42978_length_469_cov_119.096774_g35327_i0forward_frame_1 - 0.0095 16.0 0.1 0.21 11.6 0.0 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF523) ApbE PF02424.15 NODE_42976_length_469_cov_149.470046_g35325_i0reverse_frame_1 - 0.016 14.8 0.3 0.031 13.8 0.3 1.5 1 1 0 1 1 1 0 ApbE family LSM PF01423.22 NODE_42970_length_469_cov_192.958525_g35319_i0reverse_frame_1 - 1.3e-08 34.4 0.2 2.4e-08 33.5 0.1 1.5 2 0 0 2 2 2 1 LSM domain Alba PF01918.21 NODE_42967_length_469_cov_231.788018_g35316_i0forward_frame_1 - 0.063 13.1 3.8 0.51 10.2 3.3 2.6 1 1 1 2 2 2 0 Alba Csm1_N PF18504.1 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.0014 18.9 8.2 0.0014 18.9 8.2 1.8 1 1 1 2 2 2 1 Csm1 N-terminal domain KxDL PF10241.9 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.017 15.4 8.5 0.017 15.4 8.5 2.0 1 1 1 2 2 2 0 Uncharacterized conserved protein DUF148 PF02520.17 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.047 13.8 9.6 0.04 14.0 8.2 1.6 1 1 1 2 2 2 0 Domain of unknown function DUF148 DUF641 PF04859.12 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.049 14.0 9.5 0.054 13.8 8.4 1.6 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) TMF_TATA_bd PF12325.8 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.1 12.8 12.4 0.13 12.5 12.4 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding UPF0242 PF06785.11 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.18 11.9 12.0 0.23 11.6 12.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FAM76 PF16046.5 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.2 11.0 11.2 0.24 10.7 11.2 1.2 1 0 0 1 1 1 0 FAM76 protein ZapB PF06005.12 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 2 8.9 14.5 1.4 9.4 8.8 2.3 2 0 0 2 2 2 0 Cell division protein ZapB CdvA PF18822.1 NODE_42950_length_470_cov_2.193103_g35304_i0forward_frame_1 - 0.014 15.2 1.2 7.5 6.4 0.0 3.0 1 1 2 3 3 3 0 CdvA-like coiled-coil domain ApoO PF09769.9 NODE_42950_length_470_cov_2.193103_g35304_i0forward_frame_1 - 0.019 14.9 0.1 0.06 13.3 0.0 1.9 1 1 1 2 2 2 0 Apolipoprotein O APG17 PF04108.12 NODE_42950_length_470_cov_2.193103_g35304_i0forward_frame_1 - 0.038 13.1 0.8 0.076 12.1 0.6 1.6 1 1 0 1 1 1 0 Autophagy protein Apg17 LXG PF04740.12 NODE_42950_length_470_cov_2.193103_g35304_i0forward_frame_1 - 0.07 12.8 3.8 0.099 12.3 0.9 1.9 1 1 1 2 2 2 0 LXG domain of WXG superfamily DUF1002 PF06207.11 NODE_42950_length_470_cov_2.193103_g35304_i0forward_frame_1 - 0.54 9.8 3.9 0.45 10.0 0.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1002) Cytochrome_C7 PF14522.6 NODE_42947_length_470_cov_2.526437_g35301_i0reverse_frame_1 - 0.085 12.9 2.8 0.13 12.3 2.8 1.4 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c CHORD PF04968.12 NODE_42936_length_470_cov_3.942529_g35290_i0forward_frame_1 - 0.086 13.6 1.1 0.17 12.6 1.1 1.4 1 0 0 1 1 1 0 CHORD TMEM100 PF16311.5 NODE_42934_length_470_cov_5.367816_g35288_i0forward_frame_1 - 0.027 14.0 0.5 0.048 13.2 0.5 1.4 1 0 0 1 1 1 0 Transmembrane protein 100 DUF3502 PF12010.8 NODE_42933_length_470_cov_9.685057_g35287_i0forward_frame_1 - 0.019 15.6 0.1 0.026 15.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) LRRNT_2 PF08263.12 NODE_42932_length_470_cov_10.712644_g35286_i0reverse_frame_1 - 0.054 13.8 0.5 0.054 13.8 0.5 3.0 4 1 1 5 5 5 0 Leucine rich repeat N-terminal domain AP2 PF00847.20 NODE_42932_length_470_cov_10.712644_g35286_i0forward_frame_1 - 0.19 12.0 0.0 1.6 9.0 0.0 2.1 1 1 0 1 1 1 0 AP2 domain AP2 PF00847.20 NODE_42927_length_470_cov_56.719540_g35281_i0forward_frame_1 - 0.00065 19.9 3.2 0.0045 17.2 0.2 2.8 2 1 0 2 2 2 2 AP2 domain Abhydro_lipase PF04083.16 NODE_42897_length_470_cov_469.949425_g35252_i0reverse_frame_1 - 6.9e-20 70.4 0.0 1.2e-19 69.6 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Photo_RC PF00124.19 NODE_42897_length_470_cov_469.949425_g35252_i0reverse_frame_1 - 0.1 11.8 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Photosynthetic reaction centre protein THB PF18362.1 NODE_42897_length_470_cov_469.949425_g35252_i0reverse_frame_1 - 0.23 11.1 0.6 22 4.8 0.0 2.8 3 0 0 3 3 3 0 Tri-helix bundle domain NCBP3 PF10309.9 NODE_42894_length_470_cov_584.685057_g35250_i0forward_frame_1 - 0.03 14.2 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 Nuclear cap-binding protein subunit 3 DUF3287 PF11690.8 NODE_42888_length_470_cov_27346.795402_g35247_i0reverse_frame_1 - 0.61 9.8 4.0 6.6 6.5 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) DXP_redisom_C PF08436.12 NODE_42888_length_470_cov_27346.795402_g35247_i0forward_frame_1 - 0.12 12.5 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DXP_redisom_C PF08436.12 NODE_42887_length_470_cov_27346.800000_g35246_i0forward_frame_1 - 0.12 12.5 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RVP_2 PF08284.11 NODE_42879_length_471_cov_3.032110_g35238_i0reverse_frame_1 - 0.029 14.1 0.0 0.042 13.6 0.0 1.3 1 0 0 1 1 1 0 Retroviral aspartyl protease FTH PF01827.27 NODE_42868_length_471_cov_53.621560_g35227_i0reverse_frame_1 - 0.032 14.0 2.9 0.065 13.0 2.9 1.5 1 1 0 1 1 1 0 FTH domain Autophagy_C PF10381.9 NODE_42868_length_471_cov_53.621560_g35227_i0forward_frame_1 - 0.17 11.4 1.4 0.37 10.4 1.4 1.6 1 0 0 1 1 1 0 Autophagocytosis associated protein C-terminal Prok-E2_A PF14457.6 NODE_42864_length_471_cov_70.004587_g35224_i0reverse_frame_1 - 0.19 11.3 1.4 0.26 10.9 1.4 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family A PARM PF17061.5 NODE_42856_length_471_cov_100.481651_g35216_i0forward_frame_1 - 0.025 14.8 1.7 0.029 14.5 1.7 1.1 1 0 0 1 1 1 0 PARM mTERF PF02536.14 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 5.7e-16 58.3 0.0 6.3e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 mTERF HTH_3 PF01381.22 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.026 14.6 0.0 10 6.3 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix HTH_37 PF13744.6 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.059 13.3 0.0 3.7 7.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain TAL_effector PF03377.13 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.072 13.4 0.1 18 5.7 0.0 2.5 2 0 0 2 2 2 0 TAL effector repeat UBA_6 PF18039.1 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.088 12.7 0.0 17 5.4 0.0 3.0 2 1 1 3 3 3 0 UBA-like domain ATP_Ca_trans_C PF12424.8 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.097 13.2 0.0 11 6.5 0.0 2.2 2 0 0 2 2 2 0 Plasma membrane calcium transporter ATPase C terminal Microvir_lysis PF04517.12 NODE_42853_length_471_cov_117.633028_g35213_i0forward_frame_1 - 0.0021 17.9 3.2 0.91 9.5 0.2 2.3 2 0 0 2 2 2 2 Microvirus lysis protein (E), C terminus DUF3701 PF12482.8 NODE_42853_length_471_cov_117.633028_g35213_i0forward_frame_1 - 0.051 13.7 1.1 8 6.6 0.1 2.3 1 1 1 2 2 2 0 Phage integrase protein HNH_3 PF13392.6 NODE_42853_length_471_cov_117.633028_g35213_i0forward_frame_1 - 0.13 12.1 1.6 10 6.0 0.0 2.7 3 0 0 3 3 3 0 HNH endonuclease DUF5530 PF17670.1 NODE_42820_length_472_cov_2.052632_g35182_i0forward_frame_2 - 0.027 14.3 0.0 0.04 13.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5530) DUF4848 PF16140.5 NODE_42800_length_472_cov_61.368421_g35162_i0forward_frame_3 - 0.035 13.7 0.2 0.063 12.8 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4848) S_4TM PF18159.1 NODE_42799_length_472_cov_67.320366_g35161_i0forward_frame_3 - 0.049 12.9 3.8 0.065 12.5 3.8 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Glyco_hydro_4 PF02056.16 NODE_42791_length_472_cov_79.194508_g35153_i0reverse_frame_2 - 0.35 10.4 5.3 0.16 11.5 0.4 2.1 2 0 0 2 2 2 0 Family 4 glycosyl hydrolase LptF_LptG PF03739.14 NODE_42791_length_472_cov_79.194508_g35153_i0reverse_frame_2 - 1.1 8.0 3.1 1.2 7.9 3.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG zf-CRD PF17979.1 NODE_42791_length_472_cov_79.194508_g35153_i0reverse_frame_2 - 1.2 9.2 6.4 11 6.0 5.9 2.3 1 1 0 1 1 1 0 Cysteine rich domain with multizinc binding regions Inhibitor_I69 PF13734.6 NODE_42791_length_472_cov_79.194508_g35153_i0reverse_frame_2 - 2 8.9 5.1 0.73 10.3 0.2 2.2 2 0 0 2 2 2 0 Spi protease inhibitor YkyA PF10368.9 NODE_42778_length_472_cov_102.489703_g35141_i0reverse_frame_2 - 0.0007 19.3 1.5 0.00089 19.0 1.5 1.2 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein Cmyb_C PF09316.10 NODE_42778_length_472_cov_102.489703_g35141_i0reverse_frame_2 - 0.0044 16.7 0.4 0.0071 16.0 0.4 1.4 1 0 0 1 1 1 1 C-myb, C-terminal DUF2312 PF10073.9 NODE_42778_length_472_cov_102.489703_g35141_i0reverse_frame_2 - 0.021 14.5 1.6 0.021 14.5 1.6 2.0 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) CPSase_C PF18302.1 NODE_42778_length_472_cov_102.489703_g35141_i0forward_frame_3 - 0.13 12.7 4.8 3.8 8.3 0.1 3.8 2 1 0 2 2 2 0 Carbamoyl phosphate synthetase C-terminal domain DUF872 PF05915.12 NODE_42776_length_472_cov_113.173913_g35139_i0reverse_frame_3 - 0.17 12.1 1.0 0.22 11.7 0.4 1.6 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) IL11 PF07400.11 NODE_42776_length_472_cov_113.173913_g35139_i0forward_frame_3 - 0.017 14.8 0.3 0.022 14.4 0.3 1.2 1 0 0 1 1 1 0 Interleukin 11 DMRT-like PF15791.5 NODE_42773_length_472_cov_123.043478_g35136_i0reverse_frame_3 - 0.058 13.8 0.4 0.097 13.1 0.4 1.4 1 0 0 1 1 1 0 Doublesex-and mab-3-related transcription factor C1 and C2 DUF1891 PF09004.10 NODE_42764_length_472_cov_190.590389_g35127_i0reverse_frame_2 - 0.016 14.8 0.2 0.5 10.0 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1891) DpaA_N PF16924.5 NODE_42764_length_472_cov_190.590389_g35127_i0forward_frame_3 - 0.085 13.0 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain Herpes_BLLF1 PF05109.13 NODE_42761_length_472_cov_260.137300_g35124_i0reverse_frame_3 - 0.012 13.6 72.9 0.015 13.3 38.5 2.0 1 1 1 2 2 2 0 Herpes virus major outer envelope glycoprotein (BLLF1) CLZ PF16526.5 NODE_42761_length_472_cov_260.137300_g35124_i0forward_frame_2 - 0.66 10.4 5.3 5.4 7.5 1.3 2.3 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels FlxA PF14282.6 NODE_42761_length_472_cov_260.137300_g35124_i0forward_frame_2 - 4.1 7.5 15.9 1.3e+02 2.6 16.0 2.8 1 1 0 1 1 1 0 FlxA-like protein DUF1375 PF07119.12 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_2 - 3.7e-05 24.0 2.7 1 9.8 0.1 3.2 2 1 1 3 3 3 3 Protein of unknown function (DUF1375) Exonuc_V_gamma PF04257.14 NODE_42755_length_472_cov_390.629291_g35119_i0forward_frame_2 - 0.11 10.7 0.1 0.39 8.9 0.0 1.7 1 1 1 2 2 2 0 Exodeoxyribonuclease V, gamma subunit Tctex-1 PF03645.13 NODE_42750_length_472_cov_3637.775744_g34058_i3reverse_frame_3 - 1.2e-21 76.9 2.0 1.6e-21 76.4 2.0 1.2 1 0 0 1 1 1 1 Tctex-1 family DXP_redisom_C PF08436.12 NODE_42747_length_472_cov_27221.716247_g35115_i0forward_frame_3 - 0.12 12.5 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PPV_E2_N PF00508.17 NODE_42743_length_473_cov_1.794521_g35111_i0forward_frame_2 - 0.037 13.4 0.1 0.11 11.8 0.1 1.6 1 1 1 2 2 2 0 E2 (early) protein, N terminal Kinesin PF00225.23 NODE_42739_length_473_cov_2.755708_g35107_i0forward_frame_3 - 5.6e-33 114.3 0.0 7.7e-33 113.8 0.0 1.2 1 0 0 1 1 1 1 Kinesin motor domain CorA PF01544.18 NODE_42739_length_473_cov_2.755708_g35107_i0forward_frame_3 - 0.099 11.9 0.0 0.099 11.9 0.0 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein NAD_binding_4 PF07993.12 NODE_42738_length_473_cov_3.513699_g35106_i0reverse_frame_2 - 0.14 11.3 0.1 0.19 10.8 0.1 1.1 1 0 0 1 1 1 0 Male sterility protein Glycogen_syn PF05693.13 NODE_42738_length_473_cov_3.513699_g35106_i0forward_frame_2 - 0.015 13.8 0.6 0.018 13.6 0.6 1.1 1 0 0 1 1 1 0 Glycogen synthase CobW_C PF07683.14 NODE_42736_length_473_cov_3.616438_g35104_i0reverse_frame_2 - 2e-06 27.6 0.0 2.8e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain DUF1069 PF06370.11 NODE_42736_length_473_cov_3.616438_g35104_i0forward_frame_2 - 0.16 11.5 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1069) DUF4733 PF15878.5 NODE_42729_length_473_cov_64.383562_g35099_i0reverse_frame_2 - 0.026 15.0 0.0 0.045 14.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4733) RMMBL PF07521.12 NODE_42728_length_473_cov_67.812785_g35098_i0reverse_frame_3 - 0.05 13.5 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain EIAV_Rev PF11129.8 NODE_42728_length_473_cov_67.812785_g35098_i0reverse_frame_3 - 0.071 13.3 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Rev protein of equine infectious anaemia virus DUF5392 PF17370.2 NODE_42728_length_473_cov_67.812785_g35098_i0reverse_frame_3 - 0.32 11.1 7.5 0.28 11.3 6.4 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5392) DUF4231 PF14015.6 NODE_42728_length_473_cov_67.812785_g35098_i0forward_frame_2 - 0.2 12.2 3.1 0.35 11.4 3.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) YqzE PF14038.6 NODE_42724_length_473_cov_84.668950_g35094_i0forward_frame_2 - 0.0049 16.8 0.5 0.01 15.8 0.1 1.7 1 1 1 2 2 2 1 YqzE-like protein RGS12_us2 PF16611.5 NODE_42719_length_473_cov_100.125571_g35089_i0forward_frame_3 - 0.032 14.6 0.2 0.032 14.6 0.2 1.8 2 1 0 2 2 2 0 Unstructured region between RBD and GoLoco # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks139.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks139.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks139.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks139.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Dynamin_M PF01031.20 ORF8950 - 1.3e-81 274.0 0.0 2.1e-81 273.3 0.0 1.4 1 0 0 1 1 1 1 Dynamin central region GED PF02212.18 ORF8950 - 6e-26 90.4 2.3 6e-26 90.4 2.3 2.3 3 0 0 3 3 3 1 Dynamin GTPase effector domain Dynamin_N PF00350.23 ORF8950 - 1.7e-19 70.5 0.1 3.5e-19 69.5 0.1 1.5 1 0 0 1 1 1 1 Dynamin family BAG PF02179.16 ORF8950 - 0.017 15.5 0.3 13 6.3 0.1 3.8 4 0 0 4 4 4 0 BAG domain CybS PF05328.12 ORF8950 - 0.14 11.9 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit Zeta_toxin PF06414.12 ORF82017 - 1.5e-15 57.1 0.0 9e-13 48.0 0.0 2.2 2 0 0 2 2 2 2 Zeta toxin AAA_33 PF13671.6 ORF82017 - 0.00049 20.3 0.0 0.61 10.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain TniB PF05621.11 ORF82017 - 0.13 11.7 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein AA_permease_2 PF13520.6 ORF70902 - 2.7e-39 135.2 22.2 3.7e-39 134.7 22.2 1.1 1 0 0 1 1 1 1 Amino acid permease Imm59 PF15597.6 ORF4986 - 0.058 13.9 0.3 0.21 12.1 0.3 1.9 1 0 0 1 1 1 0 Immunity protein 59 DotA PF11388.8 ORF4986 - 0.17 12.1 0.4 6.6 7.0 0.1 2.5 2 0 0 2 2 2 0 Phagosome trafficking protein DotA Ion_trans PF00520.31 ORF47252 - 6.3e-19 68.2 12.7 8.9e-19 67.7 12.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF47252 - 0.0041 16.9 0.0 0.018 15.0 0.0 2.1 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF47252 - 0.022 14.3 0.0 0.079 12.5 0.0 2.0 1 0 0 1 1 1 0 EF hand EF-hand_5 PF13202.6 ORF47252 - 0.05 13.1 1.0 0.18 11.3 0.0 2.4 2 0 0 2 2 2 0 EF hand EF-hand_8 PF13833.6 ORF47252 - 0.064 13.1 0.0 2.8 7.8 0.0 2.6 2 0 0 2 2 2 0 EF-hand domain pair Peptidase_S74 PF13884.6 ORF23694 - 2.7e-10 40.4 0.1 1.2e-09 38.3 0.0 2.2 2 1 0 2 2 2 1 Chaperone of endosialidase Nup35_RRM PF05172.13 ORF23694 - 0.15 12.0 0.0 31 4.6 0.0 3.8 2 1 1 3 3 3 0 Nup53/35/40-type RNA recognition motif Anoctamin PF04547.12 ORF102196 - 8e-88 295.2 17.6 9.3e-88 295.0 17.6 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel Adap_comp_sub PF00928.21 ORF100031 - 3.1e-08 33.3 0.0 5.4e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 ORF100031 - 0.0051 16.7 1.7 0.01 15.8 1.6 1.5 1 1 0 1 1 1 1 Clathrin adaptor complex small chain muHD PF10291.9 ORF100031 - 0.0081 15.6 0.0 0.014 14.8 0.0 1.4 1 0 0 1 1 1 1 Muniscin C-terminal mu homology domain RCC1 PF00415.18 NODE_6509_length_1596_cov_333.622037_g4752_i0reverse_frame_1 - 2e-08 34.7 0.4 0.00023 21.7 0.0 3.5 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_6509_length_1596_cov_333.622037_g4752_i0reverse_frame_1 - 3.1e-06 26.8 12.4 4e-05 23.3 0.0 3.8 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat NQRA PF05896.11 NODE_6509_length_1596_cov_333.622037_g4752_i0forward_frame_1 - 0.16 11.4 0.1 0.47 9.8 0.0 1.6 2 0 0 2 2 2 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Phospholip_B PF04916.13 ORF60433 - 7.3e-74 249.2 10.3 9.8e-74 248.8 10.3 1.1 1 0 0 1 1 1 1 Phospholipase B EF-hand_7 PF13499.6 ORF53491 - 2.7e-09 37.4 3.9 0.03 14.8 0.3 5.0 4 2 0 5 5 5 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF53491 - 1.2e-08 34.2 0.6 0.0078 16.1 0.0 5.2 5 0 0 5 5 5 2 EF-hand domain EF-hand_1 PF00036.32 ORF53491 - 1.8e-08 33.3 0.9 0.016 14.7 0.0 5.0 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF53491 - 0.0096 15.8 3.1 3.6 7.5 0.1 4.3 5 0 0 5 5 5 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF53491 - 0.016 15.5 0.0 0.65 10.4 0.0 2.7 2 0 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 ORF53491 - 0.022 14.3 1.8 0.16 11.5 0.0 3.0 3 0 0 3 3 3 0 EF hand TPR_1 PF00515.28 ORF42543 - 4.5e-87 282.6 20.4 2.8e-11 42.7 0.5 11.7 11 0 0 11 11 11 11 Tetratricopeptide repeat TPR_2 PF07719.17 ORF42543 - 5.6e-69 222.8 13.6 7.4e-09 35.1 0.2 11.7 11 1 0 11 11 11 11 Tetratricopeptide repeat TPR_11 PF13414.6 ORF42543 - 9.4e-54 178.9 31.6 2.1e-10 40.1 0.6 11.7 6 3 6 12 12 12 9 TPR repeat TPR_17 PF13431.6 ORF42543 - 5.6e-52 170.4 15.0 4.5e-07 29.8 0.2 11.3 11 0 0 11 11 11 9 Tetratricopeptide repeat TPR_8 PF13181.6 ORF42543 - 4.5e-51 166.8 20.0 1.5e-07 31.1 0.1 11.9 11 1 0 11 11 11 9 Tetratricopeptide repeat TPR_12 PF13424.6 ORF42543 - 7.6e-34 115.9 8.7 3.6e-08 33.6 0.3 7.9 4 3 5 9 9 9 8 Tetratricopeptide repeat TPR_16 PF13432.6 ORF42543 - 1.2e-30 105.9 0.0 4.6e-07 30.4 0.0 6.0 5 1 0 6 6 6 4 Tetratricopeptide repeat TPR_6 PF13174.6 ORF42543 - 6.7e-23 79.8 2.2 0.0044 17.6 0.1 10.4 11 0 0 11 11 10 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF42543 - 7.5e-23 78.8 10.5 0.0096 15.9 0.0 10.6 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_9 PF13371.6 ORF42543 - 4.1e-22 78.1 0.0 0.00062 19.9 0.0 6.7 2 2 6 8 8 8 6 Tetratricopeptide repeat TPR_19 PF14559.6 ORF42543 - 1.2e-15 57.7 4.2 0.017 15.6 0.0 6.3 4 2 4 8 8 8 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF42543 - 3.1e-12 46.2 0.1 1 10.3 0.0 9.5 5 4 6 11 11 11 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF42543 - 5.1e-09 35.7 7.5 0.62 10.0 0.0 9.2 10 0 0 10 10 10 1 Tetratricopeptide repeat NARP1 PF12569.8 ORF42543 - 5.8e-09 35.4 9.6 0.0059 15.6 0.5 4.3 1 1 4 5 5 5 2 NMDA receptor-regulated protein 1 MIT PF04212.18 ORF42543 - 8.6e-09 35.3 19.6 0.076 13.1 0.1 8.1 8 1 1 9 9 8 3 MIT (microtubule interacting and transport) domain SHNi-TPR PF10516.9 ORF42543 - 2e-08 33.5 12.3 8.2 6.0 0.0 8.8 8 1 0 8 8 8 0 SHNi-TPR DUF3856 PF12968.7 ORF42543 - 2.9e-05 24.2 0.8 43 4.2 0.0 7.0 2 2 3 6 6 6 0 Domain of Unknown Function (DUF3856) TPR_5 PF12688.7 ORF42543 - 0.0001 22.5 0.4 3.1 8.1 0.0 4.7 4 0 0 4 4 4 1 Tetratrico peptide repeat ANAPC3 PF12895.7 ORF42543 - 0.00012 22.3 11.5 0.078 13.2 0.5 4.8 3 2 3 6 6 5 2 Anaphase-promoting complex, cyclosome, subunit 3 Ubiq-assoc PF09145.10 ORF42543 - 0.00031 20.6 4.7 0.31 11.1 0.0 5.1 4 0 0 4 4 4 1 Ubiquitin-associated Fis1_TPR_C PF14853.6 ORF42543 - 0.0078 16.3 7.2 41 4.4 0.1 6.5 4 2 3 7 7 6 0 Fis1 C-terminal tetratricopeptide repeat Trefoil PF00088.18 ORF42543 - 0.041 13.8 0.3 8.9 6.3 0.1 2.5 2 0 0 2 2 2 0 Trefoil (P-type) domain TPR_15 PF13429.6 ORF42543 - 0.071 12.3 0.0 53 2.9 0.0 4.0 3 2 1 4 4 4 0 Tetratricopeptide repeat SRP_TPR_like PF17004.5 ORF42543 - 0.089 12.8 0.2 0.089 12.8 0.2 3.7 2 2 1 3 3 3 0 Putative TPR-like repeat HapK PF11639.8 ORF42543 - 0.13 12.8 0.0 0.27 11.7 0.0 1.6 1 0 0 1 1 1 0 REDY-like protein HapK DUF357 PF04010.13 ORF42543 - 0.64 10.1 3.9 2.2 8.4 0.0 3.3 4 0 0 4 4 3 0 Protein of unknown function (DUF357) TOM20_plant PF06552.12 ORF42543 - 1 9.1 4.1 10 5.8 0.1 4.3 3 1 2 6 6 6 0 Plant specific mitochondrial import receptor subunit TOM20 Nodulin-like PF06813.13 ORF41638 - 5.1e-07 29.4 25.5 6.3e-07 29.1 24.1 1.9 1 1 1 2 2 2 1 Nodulin-like MFS_1 PF07690.16 ORF41638 - 0.052 12.5 55.9 0.0042 16.1 32.6 3.0 2 1 0 3 3 3 0 Major Facilitator Superfamily FlxA PF14282.6 ORF40916 - 3.4e-07 30.2 51.9 6.3e-05 22.9 9.0 8.2 2 2 4 6 6 6 4 FlxA-like protein CCDC92 PF14916.6 ORF40916 - 0.00017 21.3 29.5 0.17 11.7 0.1 8.6 8 2 0 8 8 8 4 Coiled-coil domain of unknown function Tropomyosin_1 PF12718.7 ORF40916 - 0.0013 18.9 16.4 0.0032 17.6 5.5 5.8 3 2 3 6 6 6 3 Tropomyosin like NPV_P10 PF05531.12 ORF40916 - 0.069 13.6 55.1 0.51 10.8 6.5 6.1 4 1 1 6 6 6 0 Nucleopolyhedrovirus P10 protein Peptidase_S49_N PF08496.10 ORF36683 - 0.003 17.6 1.1 0.0076 16.3 1.1 1.7 1 0 0 1 1 1 1 Peptidase family S49 N-terminal U79_P34 PF03064.16 ORF36683 - 0.78 9.0 7.5 1.9 7.8 7.5 1.6 1 0 0 1 1 1 0 HSV U79 / HCMV P34 TPR_1 PF00515.28 ORF36608 - 4.5e-87 282.6 20.4 2.8e-11 42.7 0.5 11.7 11 0 0 11 11 11 11 Tetratricopeptide repeat TPR_2 PF07719.17 ORF36608 - 5.6e-69 222.8 13.6 7.4e-09 35.1 0.2 11.7 11 1 0 11 11 11 11 Tetratricopeptide repeat TPR_11 PF13414.6 ORF36608 - 9.4e-54 178.9 31.6 2.1e-10 40.1 0.6 11.7 6 3 6 12 12 12 9 TPR repeat TPR_17 PF13431.6 ORF36608 - 5.6e-52 170.4 15.0 4.5e-07 29.8 0.2 11.3 11 0 0 11 11 11 9 Tetratricopeptide repeat TPR_8 PF13181.6 ORF36608 - 4.5e-51 166.8 20.0 1.5e-07 31.1 0.1 11.9 11 1 0 11 11 11 9 Tetratricopeptide repeat TPR_12 PF13424.6 ORF36608 - 7.6e-34 115.9 8.7 3.6e-08 33.6 0.3 7.9 4 3 5 9 9 9 8 Tetratricopeptide repeat TPR_16 PF13432.6 ORF36608 - 1.2e-30 105.9 0.0 4.6e-07 30.4 0.0 6.0 5 1 0 6 6 6 4 Tetratricopeptide repeat TPR_6 PF13174.6 ORF36608 - 6.7e-23 79.8 2.2 0.0044 17.6 0.1 10.4 11 0 0 11 11 10 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF36608 - 7.5e-23 78.8 10.5 0.0096 15.9 0.0 10.6 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_9 PF13371.6 ORF36608 - 4.1e-22 78.1 0.0 0.00062 19.9 0.0 6.7 2 2 6 8 8 8 6 Tetratricopeptide repeat TPR_19 PF14559.6 ORF36608 - 1.2e-15 57.7 4.2 0.017 15.6 0.0 6.3 4 2 4 8 8 8 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF36608 - 3.1e-12 46.2 0.1 1 10.3 0.0 9.5 5 4 6 11 11 11 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF36608 - 5.1e-09 35.7 7.5 0.62 10.0 0.0 9.2 10 0 0 10 10 10 1 Tetratricopeptide repeat NARP1 PF12569.8 ORF36608 - 5.8e-09 35.4 9.6 0.0059 15.6 0.5 4.3 1 1 4 5 5 5 2 NMDA receptor-regulated protein 1 MIT PF04212.18 ORF36608 - 8.6e-09 35.3 19.6 0.076 13.1 0.1 8.1 8 1 1 9 9 8 3 MIT (microtubule interacting and transport) domain SHNi-TPR PF10516.9 ORF36608 - 2e-08 33.5 12.3 8.2 6.0 0.0 8.8 8 1 0 8 8 8 0 SHNi-TPR DUF3856 PF12968.7 ORF36608 - 2.9e-05 24.2 0.8 43 4.2 0.0 7.0 2 2 3 6 6 6 0 Domain of Unknown Function (DUF3856) TPR_5 PF12688.7 ORF36608 - 0.0001 22.5 0.4 3.1 8.1 0.0 4.7 4 0 0 4 4 4 1 Tetratrico peptide repeat ANAPC3 PF12895.7 ORF36608 - 0.00012 22.3 11.5 0.078 13.2 0.5 4.8 3 2 3 6 6 5 2 Anaphase-promoting complex, cyclosome, subunit 3 Ubiq-assoc PF09145.10 ORF36608 - 0.00031 20.6 4.7 0.31 11.1 0.0 5.1 4 0 0 4 4 4 1 Ubiquitin-associated Fis1_TPR_C PF14853.6 ORF36608 - 0.0078 16.3 7.2 41 4.4 0.1 6.5 4 2 3 7 7 6 0 Fis1 C-terminal tetratricopeptide repeat Trefoil PF00088.18 ORF36608 - 0.041 13.8 0.3 8.9 6.3 0.1 2.5 2 0 0 2 2 2 0 Trefoil (P-type) domain TPR_15 PF13429.6 ORF36608 - 0.071 12.3 0.0 53 2.9 0.0 4.0 3 2 1 4 4 4 0 Tetratricopeptide repeat SRP_TPR_like PF17004.5 ORF36608 - 0.089 12.8 0.2 0.089 12.8 0.2 3.7 2 2 1 3 3 3 0 Putative TPR-like repeat HapK PF11639.8 ORF36608 - 0.13 12.8 0.0 0.27 11.7 0.0 1.6 1 0 0 1 1 1 0 REDY-like protein HapK DUF357 PF04010.13 ORF36608 - 0.64 10.1 3.9 2.2 8.4 0.0 3.3 4 0 0 4 4 3 0 Protein of unknown function (DUF357) TOM20_plant PF06552.12 ORF36608 - 1 9.1 4.1 10 5.8 0.1 4.3 3 1 2 6 6 6 0 Plant specific mitochondrial import receptor subunit TOM20 AAA_19 PF13245.6 ORF104614 - 0.0093 16.3 0.0 0.056 13.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain RHSP PF07999.11 ORF104614 - 0.083 11.7 0.0 0.29 9.9 0.0 1.8 2 1 0 2 2 2 0 Retrotransposon hot spot protein TauE PF01925.19 ORF104096 - 1e-11 44.9 17.9 3.4e-09 36.7 10.1 2.4 2 1 0 2 2 2 2 Sulfite exporter TauE/SafE GWT1 PF06423.12 ORF104096 - 0.0062 16.7 5.2 0.29 11.2 0.5 2.9 2 2 0 2 2 2 2 GWT1 Macoilin PF09726.9 ORF104096 - 0.16 10.5 17.8 0.21 10.1 17.8 1.1 1 0 0 1 1 1 0 Macoilin family LAP1C PF05609.12 ORF104096 - 0.59 9.2 23.7 0.89 8.6 23.7 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) LMBR1 PF04791.16 ORF104096 - 3.1 6.6 13.7 3.3 6.5 2.0 2.3 2 0 0 2 2 2 0 LMBR1-like membrane protein RCC1_2 PF13540.6 NODE_6509_length_1596_cov_333.622037_g4752_i0reverse_frame_2 - 7.5e-10 38.3 2.8 9.4e-08 31.7 0.0 3.3 3 0 0 3 3 3 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_6509_length_1596_cov_333.622037_g4752_i0reverse_frame_2 - 0.00014 22.5 0.5 0.25 12.0 0.0 3.9 4 1 1 5 5 5 2 Regulator of chromosome condensation (RCC1) repeat HSP70 PF00012.20 ORF92720 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF92720 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF92720 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF92720 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF92720 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF92720 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF92720 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus FtsX PF02687.21 ORF91908 - 0.0039 17.6 4.4 0.0039 17.6 4.4 3.9 3 1 1 4 4 4 3 FtsX-like permease family DUF4200 PF13863.6 ORF88298 - 0.024 15.0 9.0 0.024 15.0 9.0 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) DUF3450 PF11932.8 ORF88298 - 0.088 12.1 29.4 0.51 9.6 11.8 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Lipoprotein_20 PF13942.6 ORF88298 - 3.1 7.7 22.7 0.27 11.1 9.6 3.2 1 1 2 3 3 3 0 YfhG lipoprotein Tropomyosin_1 PF12718.7 ORF88298 - 7.8 6.6 53.3 0.23 11.6 9.9 3.1 2 1 1 3 3 3 0 Tropomyosin like HSP70 PF00012.20 ORF87704 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF87704 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF87704 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF87704 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF87704 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF87704 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF87704 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus HSP70 PF00012.20 ORF85918 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF85918 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF85918 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF85918 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF85918 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF85918 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF85918 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus HSP70 PF00012.20 ORF78121 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF78121 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF78121 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF78121 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF78121 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF78121 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF78121 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus CoA_transf_3 PF02515.17 ORF77985 - 7.4e-129 430.0 0.0 8.9e-129 429.8 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III Aconitase PF00330.20 ORF7702 - 1e-41 143.4 0.0 7.5e-22 77.9 0.1 2.4 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) Aconitase_2_N PF06434.13 ORF7702 - 3.9e-11 43.0 0.0 6.3e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Aconitate hydratase 2 N-terminus PI-TkoII_IV PF18714.1 ORF7702 - 0.079 12.4 0.0 1.9 8.0 0.0 2.3 2 0 0 2 2 2 0 DNA polymerase II intein Domain IV Pyr_redox_2 PF07992.14 ORF68776 - 2e-44 152.0 6.2 4.7e-44 150.8 5.9 1.7 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF68776 - 8.7e-21 74.5 2.4 3.2e-18 66.0 0.0 2.6 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF68776 - 8.7e-15 55.1 0.4 8.7e-15 55.1 0.4 3.5 4 0 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF68776 - 6.3e-10 38.7 8.6 0.00063 18.9 1.0 4.0 3 1 1 4 4 4 3 Glucose inhibited division protein A Thioredoxin_3 PF13192.6 ORF68776 - 1e-08 35.1 0.0 3.2e-08 33.5 0.0 1.9 1 0 0 1 1 1 1 Thioredoxin domain FAD_binding_2 PF00890.24 ORF68776 - 1.3e-06 27.8 15.6 0.0067 15.5 1.7 4.4 2 2 1 4 4 4 3 FAD binding domain HI0933_like PF03486.14 ORF68776 - 5.5e-05 22.1 8.1 0.13 10.9 0.3 3.5 3 0 0 3 3 3 2 HI0933-like protein FAD_oxidored PF12831.7 ORF68776 - 0.00012 21.5 14.9 0.00017 21.1 2.0 3.3 2 2 1 3 3 3 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF68776 - 0.00027 20.3 3.3 0.0032 16.8 0.5 2.3 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 ORF68776 - 0.00031 20.0 1.6 0.0041 16.4 0.2 2.3 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 ORF68776 - 0.00047 20.3 4.8 0.025 14.8 0.2 3.8 4 0 0 4 4 4 1 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 ORF68776 - 0.0025 17.0 0.7 0.036 13.2 0.1 2.6 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 ORF68776 - 0.0033 16.7 1.1 0.15 11.3 0.1 2.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Glutaredoxin PF00462.24 ORF68776 - 0.0065 16.7 6.1 0.021 15.0 0.0 3.7 4 0 0 4 4 4 1 Glutaredoxin DAO PF01266.24 ORF68776 - 0.018 14.6 12.5 0.94 9.0 0.8 3.8 5 0 0 5 5 5 0 FAD dependent oxidoreductase FMO-like PF00743.19 ORF68776 - 0.021 13.3 0.0 0.035 12.5 0.0 1.3 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Lycopene_cycl PF05834.12 ORF68776 - 0.063 12.3 3.6 2.1 7.3 0.3 3.0 3 0 0 3 3 3 0 Lycopene cyclase protein NAD_binding_7 PF13241.6 ORF68776 - 0.23 11.9 2.7 1 9.8 0.1 2.8 3 1 0 3 3 3 0 Putative NAD(P)-binding HSP70 PF00012.20 ORF68157 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF68157 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF68157 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF68157 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF68157 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF68157 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF68157 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus Alpha_kinase PF02816.18 ORF61581 - 3.3e-38 131.6 0.0 7.6e-38 130.5 0.0 1.6 1 0 0 1 1 1 1 Alpha-kinase family VWA_3 PF13768.6 ORF61581 - 0.0099 15.8 0.0 0.021 14.8 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain PKcGMP_CC PF16808.5 ORF58725 - 0.0059 16.4 1.9 0.0059 16.4 1.9 5.4 6 0 0 6 6 6 2 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_TATA_bd PF12325.8 ORF58725 - 2 8.7 38.8 0.035 14.3 2.4 4.8 1 1 4 5 5 5 0 TATA element modulatory factor 1 TATA binding Aconitase PF00330.20 ORF4057 - 2.8e-41 142.0 0.0 3.6e-39 135.1 0.0 2.4 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_2_N PF06434.13 ORF4057 - 3.9e-11 43.0 0.0 6.3e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Aconitate hydratase 2 N-terminus PI-TkoII_IV PF18714.1 ORF4057 - 0.077 12.5 0.0 1.9 8.0 0.0 2.3 2 0 0 2 2 2 0 DNA polymerase II intein Domain IV SlyX PF04102.12 ORF36287 - 0.0015 19.1 2.0 0.0015 19.1 2.0 7.4 4 2 4 8 8 8 3 SlyX ABC_tran_CTD PF16326.5 ORF36287 - 0.0089 16.3 5.6 0.0089 16.3 5.6 7.7 6 3 3 9 9 9 2 ABC transporter C-terminal domain DUF2935 PF11155.8 ORF36287 - 0.2 12.0 21.6 0.11 12.9 1.8 4.5 1 1 3 4 4 4 0 Domain of unknown function (DUF2935) RNaseH_like PF04308.12 ORF36287 - 0.48 10.3 5.6 0.21 11.5 0.3 3.0 3 0 0 3 3 3 0 Ribonuclease H-like DASH_Dam1 PF08653.10 ORF36287 - 2.4 8.1 4.4 3.4 7.6 0.6 3.3 3 0 0 3 3 3 0 DASH complex subunit Dam1 MctB PF11382.8 ORF36287 - 7.9 6.1 8.6 7.7 6.1 0.9 2.8 2 0 0 2 2 2 0 Copper transport outer membrane protein, MctB PKD_channel PF08016.12 ORF35498 - 6.4e-19 67.9 16.0 3.6e-18 65.5 16.0 1.9 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF35498 - 2e-13 50.1 12.6 4e-13 49.2 12.6 1.5 1 0 0 1 1 1 1 Ion transport protein PTRF_SDPR PF15237.6 ORF35498 - 1.1 8.9 4.9 0.58 9.7 2.1 1.8 2 0 0 2 2 2 0 PTRF/SDPR family DUF4476 PF14771.6 ORF27932 - 0.12 12.7 0.2 2.9 8.3 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4476) Ion_trans PF00520.31 ORF26064 - 0.0025 17.1 21.0 0.017 14.4 19.8 2.4 1 1 1 2 2 2 1 Ion transport protein Popeye PF04831.13 ORF26064 - 1 9.5 7.0 2.8 8.1 7.0 1.7 1 0 0 1 1 1 0 Popeye protein conserved region GYF PF02213.16 ORF23214 - 9e-13 47.7 2.6 9e-13 47.7 2.6 2.6 3 0 0 3 3 3 1 GYF domain Pkinase_Tyr PF07714.17 ORF20873 - 4e-57 193.5 0.0 5.1e-57 193.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF20873 - 1.8e-47 161.9 0.0 2.6e-47 161.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF20873 - 0.038 12.8 0.0 0.06 12.1 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase HSP70 PF00012.20 ORF1482 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF1482 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF1482 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF1482 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF1482 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF1482 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF1482 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus HSP70 PF00012.20 ORF13243 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF13243 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF13243 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF13243 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF13243 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF13243 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF13243 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus HSP70 PF00012.20 ORF1225 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF1225 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF1225 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF1225 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF1225 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF1225 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF1225 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus EF-hand_7 PF13499.6 ORF108814 - 9.8e-12 45.2 0.5 1.9e-11 44.2 0.5 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF108814 - 7.2e-11 40.8 0.1 8.7e-06 24.9 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF108814 - 5.2e-08 32.2 0.3 0.0018 18.1 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF108814 - 5.1e-05 23.0 1.3 0.00096 19.0 0.8 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF108814 - 0.0074 16.2 0.2 0.022 14.7 0.1 1.7 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand RSN1_7TM PF02714.15 ORF108020 - 5e-37 127.7 10.7 6.3e-37 127.4 10.7 1.1 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate PHM7_cyt PF14703.6 ORF108020 - 0.0033 17.7 0.0 0.0056 16.9 0.0 1.3 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter DctQ PF04290.12 ORF108020 - 5.1 7.0 18.2 0.034 14.0 7.7 2.4 2 0 0 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF5600 PF18150.1 ORF10670 - 2.3e-36 124.6 0.9 7.9e-36 122.9 0.7 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF5600) Dynamin_N PF00350.23 ORF10670 - 5.3e-15 55.9 0.0 1.7e-14 54.2 0.0 1.9 1 1 0 1 1 1 1 Dynamin family EHD_N PF16880.5 ORF10670 - 1.6e-11 43.9 0.7 3.8e-11 42.7 0.7 1.6 1 0 0 1 1 1 1 N-terminal EH-domain containing protein EF-hand_4 PF12763.7 ORF10670 - 1.9e-11 43.9 0.0 5.9e-11 42.3 0.0 1.8 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand MMR_HSR1 PF01926.23 ORF10670 - 6e-09 36.0 0.0 1.5e-08 34.7 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF10670 - 0.00011 22.1 0.8 0.22 11.4 0.2 3.3 2 1 1 3 3 3 2 RsgA GTPase EF-hand_1 PF00036.32 ORF10670 - 0.00098 18.5 0.0 0.0044 16.5 0.0 2.1 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF10670 - 0.0029 17.4 0.0 4.1 7.3 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF10670 - 0.0087 16.5 0.0 0.047 14.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF10670 - 0.011 15.6 0.1 0.29 11.2 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain AAA_28 PF13521.6 ORF10670 - 0.034 14.4 0.0 0.11 12.7 0.0 1.9 1 0 0 1 1 1 0 AAA domain EF-hand_5 PF13202.6 ORF10670 - 0.081 12.5 0.0 0.28 10.7 0.0 1.9 1 0 0 1 1 1 0 EF hand Ribosomal_S10 PF00338.22 ORF10670 - 0.17 12.2 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S10p/S20e AAA_29 PF13555.6 ORF10670 - 0.18 11.6 0.0 0.47 10.2 0.0 1.7 2 0 0 2 2 1 0 P-loop containing region of AAA domain DUF4795 PF16043.5 ORF10670 - 2.8 7.5 6.3 1.3 8.5 3.7 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) HSP70 PF00012.20 ORF104375 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF104375 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF104375 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF104375 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF104375 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF104375 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF104375 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus Hydrolase_4 PF12146.8 ORF64743 - 1.3e-05 24.6 0.0 0.038 13.2 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 cEGF PF12662.7 ORF64743 - 3.2 7.8 4.0 36 4.4 1.3 2.4 2 0 0 2 2 2 0 Complement Clr-like EGF-like RNA_pol_Rpb1_3 PF04983.18 ORF51057 - 6.4e-46 156.1 0.1 2.1e-45 154.5 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 ORF51057 - 4.2e-36 123.2 2.1 4.8e-36 123.0 0.0 2.2 3 0 0 3 3 3 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.17 ORF51057 - 6e-33 114.4 2.3 6.1e-33 114.4 0.1 2.1 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_6 PF04992.14 ORF51057 - 5.3e-32 111.2 3.4 8.3e-32 110.6 3.4 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 6 UPF0029 PF01205.19 ORF9682 - 2.2e-08 34.4 0.0 4.5e-08 33.4 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 Psm4 PF17063.5 ORF9682 - 0.3 11.7 1.5 3.1 8.6 0.1 2.8 2 0 0 2 2 2 0 Phenol-soluble modulin alpha 4 peptide UNC-79 PF14776.6 ORF9682 - 0.41 9.3 3.3 0.11 11.2 0.4 1.4 2 0 0 2 2 2 0 Cation-channel complex subunit UNC-79 AICARFT_IMPCHas PF01808.18 ORF91571 - 4.8e-120 400.5 3.8 6.1e-120 400.1 3.8 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 ORF91571 - 3.3e-32 110.5 0.0 7.6e-32 109.4 0.0 1.7 1 0 0 1 1 1 1 MGS-like domain LpxI_C PF06230.11 ORF91571 - 0.012 15.4 0.9 19 5.1 0.0 3.7 4 0 0 4 4 4 0 LpxI C-terminal domain NSP2_assoc PF14758.6 ORF91571 - 0.13 12.6 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein CoA_binding_2 PF13380.6 ORF91571 - 0.79 10.2 4.5 3.9 8.0 0.0 3.4 4 1 0 4 4 4 0 CoA binding domain Pkinase PF00069.25 ORF82274 - 3.4e-63 213.5 0.0 5.6e-63 212.8 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82274 - 6.1e-32 110.9 0.1 1.3e-31 109.9 0.1 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF82274 - 1.6e-16 60.5 0.2 9.1e-08 32.4 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF82274 - 3.4e-14 51.5 3.8 5.8e-06 25.8 0.0 4.7 5 0 0 5 5 5 2 EF-hand domain EF-hand_1 PF00036.32 ORF82274 - 2.5e-13 48.5 4.7 4.9e-05 22.6 0.0 5.1 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF82274 - 2.2e-07 30.6 4.4 0.53 10.2 0.0 5.0 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF82274 - 7.1e-06 25.3 4.4 0.00039 19.8 0.0 4.1 5 0 0 5 5 5 1 EF hand Pkinase_fungal PF17667.1 ORF82274 - 1.8e-05 23.7 0.5 0.00018 20.5 0.0 2.2 2 0 0 2 2 2 1 Fungal protein kinase Kinase-like PF14531.6 ORF82274 - 3.2e-05 23.4 0.0 7.5e-05 22.2 0.0 1.6 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF82274 - 4.2e-05 23.0 0.0 9.4e-05 21.9 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_9 PF14658.6 ORF82274 - 5.4e-05 23.4 0.1 0.045 14.1 0.0 3.7 3 0 0 3 3 3 1 EF-hand domain APH PF01636.23 ORF82274 - 8.4e-05 22.6 0.1 0.00028 20.9 0.1 1.9 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF82274 - 0.0017 18.0 0.0 0.003 17.2 0.0 1.3 1 0 0 1 1 1 1 RIO1 family YrbL-PhoP_reg PF10707.9 ORF82274 - 0.023 14.2 0.1 0.07 12.6 0.0 1.8 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL FTA2 PF13095.6 ORF82274 - 0.049 13.3 0.1 0.33 10.6 0.0 2.1 1 1 1 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 AKNA PF12443.8 ORF82274 - 0.19 12.4 1.6 2.4 8.9 0.5 2.6 2 0 0 2 2 2 0 AT-hook-containing transcription factor ERAP1_C PF11838.8 ORF8158 - 1.8e-22 80.3 0.0 2.6e-22 79.8 0.0 1.2 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Peptidase_M1 PF01433.20 ORF8158 - 8.7e-12 45.1 0.1 3.9e-11 42.9 0.0 2.1 1 1 0 1 1 1 1 Peptidase family M1 domain OSCP PF00213.18 ORF8158 - 0.034 14.3 0.7 0.21 11.7 0.1 2.6 2 1 1 3 3 3 0 ATP synthase delta (OSCP) subunit Myb_DNA-bind_5 PF13873.6 ORF8158 - 0.046 13.8 0.1 0.87 9.7 0.0 2.9 3 0 0 3 3 3 0 Myb/SANT-like DNA-binding domain Chromo_shadow PF01393.19 ORF8158 - 0.16 12.1 0.8 0.83 9.8 0.2 2.5 2 0 0 2 2 2 0 Chromo shadow domain Osmo_CC PF08946.10 ORF74031 - 0.24 11.7 0.6 0.58 10.5 0.4 1.8 2 0 0 2 2 2 0 Osmosensory transporter coiled coil CoA_transf_3 PF02515.17 ORF60567 - 7.3e-129 430.1 0.0 8.8e-129 429.8 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III DUF3626 PF12294.8 ORF564 - 8.3e-21 74.3 0.9 7.1e-20 71.2 0.4 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF3626) EF-hand_6 PF13405.6 ORF564 - 2.7e-07 30.0 0.1 0.0065 16.3 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF564 - 3.8e-06 26.1 0.0 0.087 12.4 0.0 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF564 - 5e-06 26.9 0.0 1.8e-05 25.1 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF564 - 6.6e-05 22.2 0.5 0.36 10.4 0.0 2.9 3 0 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF564 - 0.00054 20.3 0.0 0.0017 18.7 0.0 1.9 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF564 - 0.012 15.5 0.2 16 5.4 0.0 3.5 3 1 0 3 3 3 0 EF-hand domain pair RNA_pol_N PF01194.17 ORF564 - 0.17 12.2 0.1 0.64 10.4 0.0 2.1 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit CoA_transf_3 PF02515.17 ORF54193 - 7.3e-129 430.1 0.0 8.8e-129 429.8 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III HA2 PF04408.23 ORF52743 - 0.08 13.2 0.3 0.18 12.1 0.3 1.6 1 0 0 1 1 1 0 Helicase associated domain (HA2) Claudin_2 PF13903.6 ORF52743 - 2.3 7.9 10.0 0.75 9.5 0.7 3.0 2 2 1 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction EOS1 PF12326.8 ORF52743 - 4.9 7.0 6.6 0.21 11.5 0.3 2.1 2 0 0 2 2 2 0 N-glycosylation protein DUF2207 PF09972.9 ORF33967 - 0.24 10.1 0.3 0.31 9.8 0.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Nucleo_P87 PF07267.11 ORF33967 - 0.47 9.2 3.6 0.71 8.7 3.6 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 CoA_transf_3 PF02515.17 ORF28578 - 7.3e-129 430.1 0.0 8.8e-129 429.8 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III DEAD PF00270.29 ORF25820 - 2.5e-24 86.0 0.0 2.9e-23 82.5 0.0 2.3 2 1 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 ORF25820 - 8.7e-10 38.9 0.0 4.2e-09 36.7 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_11 PF13086.6 ORF25820 - 0.0014 18.5 0.1 0.14 11.9 0.0 2.6 2 1 1 3 3 3 1 AAA domain Helicase_C PF00271.31 ORF25820 - 0.0018 18.6 0.0 0.0035 17.7 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 ORF25820 - 0.0074 16.6 0.0 0.022 15.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF25820 - 0.049 13.4 0.0 0.27 10.9 0.0 2.4 3 1 0 3 3 3 0 AAA domain AAA PF00004.29 ORF25820 - 0.11 12.9 0.1 1.4 9.3 0.1 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MORN PF02493.20 ORF24735 - 1.9e-50 165.9 83.4 1.6e-07 30.8 0.2 11.7 12 0 0 12 12 12 11 MORN repeat Sigma54_activat PF00158.26 ORF94987 - 9.7e-65 217.4 0.1 1.3e-64 216.9 0.1 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain PrpR_N PF06506.11 ORF94987 - 1.4e-49 167.9 0.2 2.1e-49 167.3 0.2 1.3 1 0 0 1 1 1 1 Propionate catabolism activator Sigma54_activ_2 PF14532.6 ORF94987 - 6.6e-19 68.4 0.0 2.7e-18 66.4 0.0 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 ORF94987 - 3.7e-11 42.6 0.2 2.8e-10 39.8 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family Mg_chelatase PF01078.21 ORF94987 - 5e-05 22.8 0.3 0.00015 21.2 0.3 1.7 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 ORF94987 - 0.0022 18.0 0.0 0.027 14.5 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 ORF94987 - 0.0049 17.3 0.0 0.01 16.3 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 ORF94987 - 0.023 14.8 0.0 0.068 13.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) FAD_binding_2 PF00890.24 ORF90577 - 2.3e-32 112.6 0.0 3e-32 112.2 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain NAD_binding_1 PF00175.21 ORF90577 - 7e-14 52.4 0.0 1.2e-13 51.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF90577 - 4.2e-12 46.3 0.0 8.9e-12 45.2 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain EFG_IV PF03764.18 ORF87575 - 1.2e-20 73.5 0.0 3.9e-20 71.8 0.0 1.9 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF87575 - 1.2e-15 57.3 0.0 2.6e-15 56.2 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF87575 - 4.8e-15 55.7 0.1 8.3e-15 54.9 0.1 1.4 1 0 0 1 1 1 1 Elongation factor Tu domain 2 HSP70 PF00012.20 ORF74407 - 3.7e-177 590.2 0.0 4.2e-177 590.0 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF74407 - 2.5e-16 59.4 0.1 4.7e-16 58.5 0.1 1.4 1 0 0 1 1 1 1 MreB/Mbl protein BTB_2 PF02214.22 ORF64261 - 6.8e-05 23.1 0.0 0.00015 22.1 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain DcpS_C PF11969.8 ORF64261 - 0.003 18.0 0.1 0.0065 16.9 0.1 1.5 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding FAD_binding_2 PF00890.24 ORF5990 - 2.3e-32 112.6 0.0 3e-32 112.2 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain NAD_binding_1 PF00175.21 ORF5990 - 7e-14 52.4 0.0 1.2e-13 51.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF5990 - 4.2e-12 46.3 0.0 8.9e-12 45.2 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain ABC_membrane_2 PF06472.15 ORF99547 - 9.8e-47 159.6 4.6 1.5e-46 159.0 4.6 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 ABC_tran PF00005.27 ORF99547 - 8.5e-16 58.7 0.0 1.2e-13 51.7 0.0 2.8 2 1 0 2 2 2 1 ABC transporter SbmA_BacA PF05992.12 ORF99547 - 3.9e-13 49.5 4.2 8.5e-13 48.4 4.2 1.5 1 1 0 1 1 1 1 SbmA/BacA-like family ABC_membrane PF00664.23 ORF99547 - 5.8e-06 26.2 5.6 7.7e-06 25.8 5.6 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region NACHT PF05729.12 ORF99547 - 0.0027 17.6 0.0 0.0068 16.3 0.0 1.7 1 0 0 1 1 1 1 NACHT domain AAA_16 PF13191.6 ORF99547 - 0.004 17.6 0.2 0.0089 16.4 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF99547 - 0.0046 16.7 0.0 0.19 11.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 ORF99547 - 0.0093 15.9 0.2 0.02 14.8 0.2 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF99547 - 0.014 15.1 0.2 0.032 14.0 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_21 PF13304.6 ORF99547 - 0.025 14.4 0.1 0.063 13.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF99547 - 0.04 13.3 0.0 0.22 10.9 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain SASA PF03629.18 ORF99547 - 0.069 12.8 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Carbohydrate esterase, sialic acid-specific acetylesterase MMR_HSR1 PF01926.23 ORF99547 - 0.08 13.0 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_25 PF13481.6 ORF99547 - 0.11 12.1 0.1 14 5.2 0.0 2.6 3 0 0 3 3 3 0 AAA domain RRM_1 PF00076.22 ORF93467 - 4.6e-16 58.4 0.0 1.1e-15 57.2 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) U1snRNP70_N PF12220.8 ORF93467 - 0.0093 16.6 0.5 0.0093 16.6 0.5 5.9 3 2 0 3 3 3 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal C2 PF00168.30 ORF88852 - 3.6e-31 107.5 0.0 1.2e-14 54.5 0.0 2.4 2 0 0 2 2 2 2 C2 domain Sod_Cu PF00080.20 ORF75219 - 1.3e-12 48.1 8.8 3.2e-06 27.4 0.2 4.5 3 2 0 3 3 3 3 Copper/zinc superoxide dismutase (SODC) fn3 PF00041.21 ORF33695 - 9.6e-25 86.8 30.4 1.1e-06 28.9 4.4 6.7 6 1 0 6 6 6 6 Fibronectin type III domain Tissue_fac PF01108.17 ORF33695 - 0.0014 18.5 6.5 0.44 10.4 0.0 3.8 4 0 0 4 4 4 2 Tissue factor fn3_4 PF16794.5 ORF33695 - 0.093 12.7 3.7 3.2 7.7 0.0 3.9 4 1 0 4 4 4 0 Fibronectin-III type domain Pur_ac_phosph_N PF16656.5 ORF33695 - 0.65 10.6 29.5 0.11 13.1 6.2 4.7 5 0 0 5 5 5 0 Purple acid Phosphatase, N-terminal domain GLEYA PF10528.9 ORF33695 - 5.8 7.4 9.9 16 6.0 0.2 3.9 3 1 1 4 4 4 0 GLEYA domain Sod_Cu PF00080.20 ORF2014 - 1.3e-12 48.1 8.8 3.2e-06 27.4 0.2 4.5 3 2 0 3 3 3 3 Copper/zinc superoxide dismutase (SODC) Sod_Cu PF00080.20 ORF1751 - 1.3e-12 48.1 8.8 3.2e-06 27.4 0.2 4.5 3 2 0 3 3 3 3 Copper/zinc superoxide dismutase (SODC) RRM_1 PF00076.22 ORF14830 - 2.1e-19 69.1 1.0 1.5e-11 44.0 0.0 4.7 4 1 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF14830 - 0.047 13.6 0.0 1.3 8.9 0.0 2.6 2 0 0 2 2 2 0 Occluded RNA-recognition motif CDC45 PF02724.14 ORF14830 - 3.5 5.8 19.9 5.4 5.2 19.9 1.2 1 0 0 1 1 1 0 CDC45-like protein Dsh_C PF12316.8 ORF14830 - 4.6 7.6 14.3 3.8 7.9 5.2 2.8 3 0 0 3 3 3 0 Segment polarity protein dishevelled (Dsh) C terminal PolyA_pol PF01743.20 ORF109396 - 3.3e-08 34.0 0.0 6e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 Poly A polymerase head domain TSP_1 PF00090.19 ORF101661 - 0.00028 21.0 4.1 0.00028 21.0 4.1 2.6 2 0 0 2 2 2 1 Thrombospondin type 1 domain DnaJ PF00226.31 ORF101661 - 0.00055 20.0 0.1 0.0011 19.1 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain DUF2833 PF11090.8 NODE_6764_length_1576_cov_238.919533_g4940_i0reverse_frame_1 - 0.61 10.5 3.3 1.4 9.3 1.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2833) Aldedh PF00171.22 ORF5608 - 3.7e-152 507.1 0.0 4.3e-152 506.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF5349 PF17298.2 ORF41222 - 8.9 6.0 10.8 1.3 8.7 0.2 3.2 2 2 2 4 4 4 0 Family of unknown function (DUF5349) Tho2 PF11262.8 ORF28406 - 5.6e-73 245.8 4.9 5.6e-73 245.8 4.9 1.8 2 0 0 2 2 2 1 Transcription factor/nuclear export subunit protein 2 Sec23_helical PF04815.15 ORF28406 - 0.11 12.3 0.0 0.52 10.2 0.0 2.3 2 1 0 2 2 2 0 Sec23/Sec24 helical domain Tho2 PF11262.8 ORF12721 - 5.6e-73 245.8 4.9 5.6e-73 245.8 4.9 1.8 2 0 0 2 2 2 1 Transcription factor/nuclear export subunit protein 2 Sec23_helical PF04815.15 ORF12721 - 0.11 12.3 0.0 0.52 10.2 0.0 2.3 2 1 0 2 2 2 0 Sec23/Sec24 helical domain Tho2 PF11262.8 ORF110254 - 5.6e-73 245.8 4.9 5.6e-73 245.8 4.9 1.8 2 0 0 2 2 2 1 Transcription factor/nuclear export subunit protein 2 Sec23_helical PF04815.15 ORF110254 - 0.11 12.3 0.0 0.52 10.2 0.0 2.3 2 1 0 2 2 2 0 Sec23/Sec24 helical domain JHY PF15261.6 ORF74235 - 9.6e-17 61.9 9.6 9.6e-17 61.9 9.6 3.9 4 1 0 4 4 4 1 Jhy protein BCCT PF02028.17 ORF7146 - 6.1e-150 499.9 32.4 7.1e-150 499.6 32.4 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter Ank_5 PF13857.6 ORF70497 - 1.9e-25 88.6 0.2 1.6e-07 31.5 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF70497 - 7.9e-25 87.3 0.0 9.2e-09 35.8 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF70497 - 2e-21 76.1 0.8 9e-06 26.1 0.0 4.3 3 1 1 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF70497 - 1.1e-20 71.4 0.0 0.0039 17.6 0.0 5.7 5 0 0 5 5 5 5 Ankyrin repeat Ank PF00023.30 ORF70497 - 6.8e-15 54.8 0.0 0.0037 17.6 0.0 6.3 6 0 0 6 6 6 3 Ankyrin repeat DUF1319 PF07028.11 ORF70497 - 0.33 11.2 1.6 2.6 8.3 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1319) RVT_1 PF00078.27 ORF44947 - 2.1e-21 76.5 0.0 7.2e-21 74.7 0.0 1.8 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) p450 PF00067.22 ORF4488 - 1.7e-45 155.7 0.0 3.6e-45 154.6 0.0 1.5 1 1 0 1 1 1 1 Cytochrome P450 Tyrosinase PF00264.20 ORF40304 - 2e-19 70.8 13.2 1e-18 68.5 13.2 2.1 1 1 0 1 1 1 1 Common central domain of tyrosinase EF-hand_6 PF13405.6 ORF37922 - 3.1e-19 67.2 1.6 6.2e-05 22.6 0.0 7.8 8 1 1 9 9 9 5 EF-hand domain EF-hand_7 PF13499.6 ORF37922 - 4.9e-17 62.1 4.5 3.5e-06 27.4 0.0 6.1 5 3 2 7 7 7 4 EF-hand domain pair EF-hand_1 PF00036.32 ORF37922 - 1.2e-16 58.9 0.1 0.00019 20.7 0.0 6.5 8 0 0 8 8 8 4 EF hand EF-hand_5 PF13202.6 ORF37922 - 9.1e-10 37.6 3.4 0.0021 17.5 0.0 5.6 5 1 0 5 5 5 2 EF hand EF-hand_8 PF13833.6 ORF37922 - 2.8e-09 36.7 0.1 0.29 11.0 0.0 5.5 4 1 1 5 5 5 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF37922 - 0.12 12.7 0.0 3.6 8.0 0.0 3.1 3 1 1 4 4 4 0 EF-hand domain YL1 PF05764.13 ORF30178 - 3.3e-20 73.2 36.2 3.3e-20 73.2 36.2 3.5 2 1 1 3 3 3 1 YL1 nuclear protein YL1_C PF08265.11 ORF30178 - 2e-11 43.4 0.0 3.6e-11 42.6 0.0 1.4 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain PARP PF00644.20 ORF21858 - 6.2e-10 39.0 0.0 1.2e-09 38.0 0.0 1.5 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain WWE PF02825.20 ORF21858 - 7.6e-06 26.4 0.0 2e-05 25.1 0.0 1.7 1 0 0 1 1 1 1 WWE domain p450 PF00067.22 ORF12980 - 1.7e-45 155.7 0.0 3.6e-45 154.6 0.0 1.5 1 1 0 1 1 1 1 Cytochrome P450 JHY PF15261.6 ORF107574 - 9.6e-17 61.9 9.6 9.6e-17 61.9 9.6 3.9 4 1 0 4 4 4 1 Jhy protein HA2 PF04408.23 ORF100622 - 0.079 13.3 0.3 0.18 12.1 0.3 1.6 1 0 0 1 1 1 0 Helicase associated domain (HA2) Claudin_2 PF13903.6 ORF100622 - 2 8.1 9.8 0.75 9.5 0.7 3.0 2 2 1 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction EOS1 PF12326.8 ORF100622 - 4.9 7.1 6.6 0.21 11.5 0.3 2.1 2 0 0 2 2 2 0 N-glycosylation protein Glyco_transf_22 PF03901.17 ORF99528 - 3.7e-67 227.4 11.0 4.2e-67 227.2 11.0 1.0 1 0 0 1 1 1 1 Alg9-like mannosyltransferase family Alanine_zipper PF11839.8 ORF97507 - 0.0067 16.8 12.4 0.0067 16.8 12.4 5.2 4 1 1 5 5 5 1 Alanine-zipper, major outer membrane lipoprotein DUF1040 PF06288.13 ORF92626 - 0.19 12.1 2.1 0.63 10.5 2.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1040) NPV_P10 PF05531.12 ORF92626 - 0.23 11.9 5.7 8.5 6.9 0.2 3.4 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF641 PF04859.12 ORF92626 - 0.38 11.1 12.5 0.12 12.7 6.1 2.6 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) AAA_23 PF13476.6 ORF92626 - 0.55 10.7 12.0 9.7 6.6 0.1 2.4 2 0 0 2 2 2 0 AAA domain Glu-tRNAGln PF02686.15 ORF92626 - 1.7 9.0 4.7 0.72 10.2 0.7 2.5 2 0 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit Prefoldin_2 PF01920.20 ORF92626 - 1.7 8.6 20.4 13 5.8 0.6 3.8 3 1 0 3 3 3 0 Prefoldin subunit FapA PF03961.13 ORF92626 - 1.9 7.0 13.5 0.64 8.6 9.4 1.9 2 0 0 2 2 2 0 Flagellar Assembly Protein A Spc7 PF08317.11 ORF92626 - 4.6 6.0 18.6 1.5 7.6 12.0 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein FlaC_arch PF05377.11 ORF92626 - 4.9 7.6 6.9 33 5.0 0.4 3.3 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) DUF16 PF01519.16 ORF92626 - 7.3 7.1 11.6 1.7 9.2 6.0 2.4 2 0 0 2 2 2 0 Protein of unknown function DUF16 Seryl_tRNA_N PF02403.22 ORF92626 - 8.1 6.7 21.2 4 7.7 2.7 3.7 3 0 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain SBP_bac_5 PF00496.22 ORF86991 - 1.9e-92 310.1 1.9 2.4e-92 309.8 1.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Tenui_NS4 PF03300.13 ORF86991 - 0.15 11.5 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 Tenuivirus non-structural, movement protein NS4 ThiF PF00899.21 ORF8406 - 8.7e-26 90.8 0.0 1.3e-25 90.2 0.0 1.3 1 0 0 1 1 1 1 ThiF family UDPGP PF01704.18 ORF81552 - 1.1e-63 215.4 0.0 6e-62 209.6 0.0 2.1 1 1 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase Glyco_transf_5 PF08323.11 ORF81552 - 1.4e-45 155.9 0.1 2.1e-45 155.3 0.1 1.2 1 0 0 1 1 1 1 Starch synthase catalytic domain 4HBT PF03061.22 ORF80749 - 1.3e-08 35.1 0.5 7.1e-08 32.7 0.5 2.2 1 1 0 1 1 1 1 Thioesterase superfamily START PF01852.19 ORF80749 - 2.8e-06 26.9 0.0 5.1e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 START domain UDPGP PF01704.18 ORF77252 - 1.1e-63 215.4 0.0 6e-62 209.6 0.0 2.1 1 1 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase Glyco_transf_5 PF08323.11 ORF77252 - 1.4e-45 155.9 0.1 2.1e-45 155.3 0.1 1.2 1 0 0 1 1 1 1 Starch synthase catalytic domain Nucleotid_trans PF03407.16 ORF68761 - 8.6e-06 25.9 0.0 1.3e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Nucleotide-diphospho-sugar transferase SUI1 PF01253.22 ORF45619 - 2.7e-11 43.9 1.8 3.5e-11 43.5 0.0 2.1 3 0 0 3 3 3 1 Translation initiation factor SUI1 Pre-PUA PF17832.1 ORF45619 - 1.2e-06 29.1 0.1 5.1e-06 27.1 0.0 2.1 2 0 0 2 2 2 1 Pre-PUA-like domain PUA PF01472.20 ORF45619 - 0.00016 21.6 0.1 0.0012 18.8 0.1 2.5 1 1 0 1 1 1 1 PUA domain DEAD PF00270.29 ORF44738 - 2.2e-20 73.1 0.0 4.7e-20 72.1 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase R3H PF01424.22 ORF44738 - 2.9e-05 24.0 0.0 8.7e-05 22.4 0.0 1.8 1 0 0 1 1 1 1 R3H domain Helicase_C PF00271.31 ORF44738 - 0.0011 19.3 0.0 0.0028 18.0 0.0 1.8 1 1 0 1 1 1 1 Helicase conserved C-terminal domain SecD_SecF PF02355.16 ORF38088 - 9.8e-16 57.7 10.3 1.6e-15 57.0 10.3 1.2 1 0 0 1 1 1 1 Protein export membrane protein MMPL PF03176.15 ORF38088 - 1.7e-08 33.8 12.2 1.7e-08 33.8 12.2 1.6 2 0 0 2 2 2 1 MMPL family Sec_GG PF07549.14 ORF38088 - 2.5e-06 26.8 0.0 5.6e-06 25.7 0.0 1.6 1 0 0 1 1 1 1 SecD/SecF GG Motif Lipase_GDSL PF00657.22 ORF38088 - 0.081 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase SecD-TM1 PF13721.6 ORF38088 - 0.13 12.8 0.1 0.93 10.0 0.0 2.5 2 0 0 2 2 2 0 SecD export protein N-terminal TM region Patched PF02460.18 ORF38088 - 0.56 8.2 7.1 0.78 7.7 7.1 1.1 1 0 0 1 1 1 0 Patched family Sterol-sensing PF12349.8 ORF38088 - 2.8 7.8 6.4 5.1 6.9 6.4 1.4 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation GAF PF01590.26 ORF32990 - 1.6e-24 87.0 0.1 2.2e-16 60.7 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 ORF32990 - 7.8e-21 74.8 0.0 1.1e-13 51.7 0.0 2.8 2 1 0 2 2 2 2 GAF domain GAF_3 PF13492.6 ORF32990 - 3.2e-15 56.6 0.0 4e-09 36.9 0.0 2.9 3 0 0 3 3 3 2 GAF domain C2 PF00168.30 ORF32990 - 1.2e-07 31.9 0.0 1e-06 29.0 0.0 2.5 2 1 0 2 2 2 1 C2 domain SpoVT_C PF15714.5 ORF32990 - 0.0049 16.9 0.1 0.14 12.2 0.0 2.5 2 0 0 2 2 2 1 Stage V sporulation protein T C-terminal, transcription factor ACR_tran PF00873.19 ORF27325 - 7.2e-173 576.8 6.3 8.1e-173 576.7 6.3 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Man-6-P_recep PF02157.15 ORF27325 - 0.082 12.0 0.8 0.16 11.0 0.8 1.5 1 0 0 1 1 1 0 Mannose-6-phosphate receptor SHIPPO-rpt PF07004.12 ORF20989 - 5.4e-15 55.5 40.5 0.017 16.0 2.1 11.3 11 0 0 11 11 11 9 Sperm-tail PG-rich repeat PHD_2 PF13831.6 ORF12882 - 0.016 14.7 2.3 0.039 13.5 2.3 1.6 1 0 0 1 1 1 0 PHD-finger PHD PF00628.29 ORF12882 - 0.033 14.1 4.7 0.079 12.9 4.7 1.7 1 0 0 1 1 1 0 PHD-finger TRAP-gamma PF07074.12 ORF12882 - 1.6 8.3 10.3 2.2 7.8 5.6 2.5 1 1 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) zf-B_box PF00643.24 ORF12882 - 6.5 7.0 16.8 0.099 12.8 9.1 1.9 2 0 0 2 2 2 0 B-box zinc finger LapA_dom PF06305.11 NODE_6879_length_1567_cov_193.661227_g5029_i0forward_frame_1 - 0.092 12.6 2.2 0.13 12.1 0.0 2.4 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain RELT PF12606.8 NODE_6879_length_1567_cov_193.661227_g5029_i0forward_frame_1 - 1.2 8.2 5.8 0.12 11.4 0.9 1.9 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 Ephrin_rec_like PF07699.13 NODE_6823_length_1571_cov_111.206380_g4984_i0reverse_frame_2 - 0.36 10.6 12.5 0.074 12.8 8.2 2.1 1 1 1 2 2 2 0 Putative ephrin-receptor like PMG PF05287.12 ORF86142 - 0.066 13.2 0.3 0.12 12.4 0.3 1.4 1 0 0 1 1 1 0 PMG protein IMCp PF12314.8 ORF78226 - 1.3e-32 112.0 119.9 4.6e-08 33.2 28.0 9.0 2 1 7 9 9 9 9 Inner membrane complex protein zinc_ribbon_2 PF13240.6 ORF78226 - 0.0014 18.2 2.9 0.0026 17.4 2.9 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF78226 - 0.0027 17.7 1.1 0.0048 16.9 1.1 1.4 1 0 0 1 1 1 1 Double zinc ribbon MgtE_N PF03448.17 ORF78226 - 0.068 13.8 0.4 0.068 13.8 0.4 2.6 3 0 0 3 3 3 0 MgtE intracellular N domain zf-ribbon_3 PF13248.6 ORF78226 - 0.21 11.0 1.2 0.43 10.1 1.2 1.6 1 0 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 ORF78226 - 0.43 10.8 4.5 16 5.7 0.1 2.6 2 0 0 2 2 2 0 Zinc ribbon domain UPF0547 PF10571.9 ORF78226 - 1.4 9.0 7.2 7.4 6.7 7.2 2.3 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 Mito_carr PF00153.27 ORF77017 - 8.2e-38 128.2 1.3 2e-14 53.3 0.1 3.3 3 0 0 3 3 3 3 Mitochondrial carrier protein p450 PF00067.22 ORF67477 - 2e-49 168.6 1.4 3.1e-49 168.0 1.4 1.3 1 0 0 1 1 1 1 Cytochrome P450 Adap_comp_sub PF00928.21 ORF57076 - 3.7e-08 33.1 0.0 7e-08 32.1 0.0 1.4 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 ORF57076 - 0.005 16.8 1.7 0.0099 15.8 1.6 1.5 1 1 0 1 1 1 1 Clathrin adaptor complex small chain muHD PF10291.9 ORF57076 - 0.0079 15.7 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Muniscin C-terminal mu homology domain HSP70 PF00012.20 ORF52684 - 5.2e-12 44.8 8.2 5.2e-12 44.8 8.2 3.4 2 1 0 2 2 2 1 Hsp70 protein RNB PF00773.19 ORF34577 - 1.3e-95 320.4 0.0 1.8e-95 320.0 0.0 1.1 1 0 0 1 1 1 1 RNB domain Rrp44_S1 PF17215.3 ORF34577 - 0.00015 21.6 0.9 0.001 19.0 0.3 2.5 2 1 0 2 2 2 1 S1 domain S1 PF00575.23 ORF34577 - 0.12 12.7 0.3 0.76 10.2 0.0 2.1 2 0 0 2 2 2 0 S1 RNA binding domain PPR_2 PF13041.6 ORF31053 - 9e-73 240.3 0.0 1.7e-11 44.1 0.0 9.6 2 2 8 10 10 10 10 PPR repeat family PPR PF01535.20 ORF31053 - 1.1e-65 213.3 4.8 9.1e-06 25.6 0.1 12.1 12 0 0 12 12 12 11 PPR repeat PPR_1 PF12854.7 ORF31053 - 3e-65 215.6 0.0 2.1e-07 30.5 0.0 12.2 13 0 0 13 13 13 11 PPR repeat PPR_3 PF13812.6 ORF31053 - 5.3e-63 209.0 0.0 8.6e-16 57.8 0.0 7.8 4 1 5 9 9 9 9 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF31053 - 5.8e-35 120.6 2.4 2.7e-08 33.4 0.0 4.3 1 1 3 4 4 4 4 Pentacotripeptide-repeat region of PRORP TPR_14 PF13428.6 ORF31053 - 7e-12 45.1 20.3 2.2 9.3 0.2 10.5 2 2 9 11 11 11 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF31053 - 1.5e-08 34.5 14.0 0.15 12.8 0.2 7.6 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF31053 - 8.2e-06 26.4 11.3 0.29 11.8 0.0 6.0 4 3 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF31053 - 3.1e-05 24.4 8.1 2.7 8.5 0.2 6.5 3 1 5 8 8 8 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF31053 - 3.2e-05 23.6 2.2 11 6.3 0.0 6.8 8 0 0 8 8 6 0 Tetratricopeptide repeat COX5A PF02284.16 ORF31053 - 0.0095 15.9 0.0 1.4 9.0 0.0 3.2 2 1 0 3 3 3 1 Cytochrome c oxidase subunit Va Clathrin PF00637.20 ORF31053 - 0.017 15.0 0.0 17 5.3 0.0 4.0 3 2 2 5 5 5 0 Region in Clathrin and VPS PAC2 PF09754.9 ORF31053 - 0.049 13.6 0.1 0.18 11.8 0.1 2.0 1 1 0 1 1 1 0 PAC2 family B12-binding_2 PF02607.17 ORF31053 - 0.093 13.2 4.3 67 4.0 0.0 5.0 4 1 2 6 6 5 0 B12 binding domain Ketoacyl-synt_C PF02801.22 ORF31053 - 0.34 10.9 1.3 3.8 7.6 0.0 3.3 3 1 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain TPR_2 PF07719.17 ORF31053 - 3.5 8.0 12.2 1.8e+02 2.6 0.0 7.2 10 0 0 10 10 8 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF31053 - 3.9 7.9 4.7 28 5.2 0.0 4.7 7 0 0 7 7 5 0 Tetratricopeptide repeat DoxX_2 PF13564.6 ORF31053 - 5.3 7.2 5.6 2.8 8.1 0.8 2.6 3 0 0 3 3 3 0 DoxX-like family GD_AH_C PF04295.13 ORF29888 - 7e-147 489.3 0.0 8.1e-147 489.1 0.0 1.0 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus SAF PF08666.12 ORF29888 - 8.5e-14 51.9 1.0 2.8e-13 50.3 0.3 2.2 2 0 0 2 2 2 1 SAF domain AAA_33 PF13671.6 ORF20257 - 0.00024 21.3 3.0 0.0044 17.2 0.2 2.8 2 1 0 2 2 2 1 AAA domain tRNA_lig_kinase PF08303.11 ORF20257 - 0.00055 20.1 0.0 0.12 12.4 0.0 2.9 1 1 0 1 1 1 1 tRNA ligase kinase domain AAA_16 PF13191.6 ORF20257 - 0.00082 19.8 0.1 0.00082 19.8 0.1 2.8 2 2 0 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 ORF20257 - 0.002 18.7 0.1 0.01 16.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain tRNA_lig_CPD PF08302.11 ORF20257 - 0.1 12.0 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Fungal tRNA ligase phosphodiesterase domain Gtr1_RagA PF04670.12 ORF20257 - 0.14 11.5 0.1 0.25 10.7 0.1 1.4 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region NTPase_1 PF03266.15 ORF20257 - 0.22 11.4 0.2 0.78 9.6 0.0 1.9 2 0 0 2 2 2 0 NTPase Paz_1 PF18349.1 ORF94805 - 0.79 9.7 10.8 8.3 6.4 0.1 3.8 2 1 0 4 4 4 0 PAZ domain EF-hand_7 PF13499.6 ORF94545 - 1.8e-11 44.3 14.5 4.5e-10 39.8 1.9 3.6 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF94545 - 1.7e-09 36.8 16.9 7.4e-05 22.4 0.2 5.0 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF94545 - 1.3e-07 30.6 18.8 0.00039 19.8 0.6 5.1 5 1 0 5 5 5 2 EF hand EF-hand_8 PF13833.6 ORF94545 - 3.6e-07 29.9 13.2 0.0063 16.3 0.2 4.7 5 0 0 5 5 5 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF94545 - 0.034 13.6 0.0 0.034 13.6 0.0 4.1 6 0 0 6 6 6 0 EF hand EF-hand_11 PF08976.11 ORF94545 - 0.082 13.8 1.7 3.2 8.7 0.1 3.2 2 1 0 3 3 3 0 EF-hand domain Caleosin PF05042.13 ORF94545 - 0.57 10.1 4.6 36 4.2 0.1 3.7 2 1 2 4 4 4 0 Caleosin related protein Methyltransf_11 PF08241.12 ORF85403 - 5e-27 94.4 0.0 3.2e-15 56.6 0.0 2.6 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.6 ORF85403 - 9.8e-27 93.5 0.0 1.2e-16 61.2 0.0 2.9 3 0 0 3 3 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 ORF85403 - 1.4e-21 77.0 0.0 5.9e-10 39.2 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_12 PF08242.12 ORF85403 - 1.3e-20 73.9 0.0 2.1e-09 38.0 0.0 2.6 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_31 PF13847.6 ORF85403 - 5.1e-20 71.8 0.0 2.8e-10 40.2 0.0 2.5 2 0 0 2 2 2 2 Methyltransferase domain CheR PF01739.18 ORF85403 - 6.7e-11 42.0 0.0 1.7e-05 24.4 0.0 2.6 2 0 0 2 2 2 2 CheR methyltransferase, SAM binding domain Methyltransf_PK PF05891.12 ORF85403 - 6.1e-09 35.7 0.0 4.3e-08 33.0 0.0 2.1 2 0 0 2 2 2 1 AdoMet dependent proline di-methyltransferase MTS PF05175.14 ORF85403 - 7.7e-09 35.3 0.0 6.5e-05 22.5 0.0 3.2 3 0 0 3 3 3 1 Methyltransferase small domain Ubie_methyltran PF01209.18 ORF85403 - 2.7e-08 33.4 0.0 0.0059 16.0 0.0 2.3 2 0 0 2 2 2 2 ubiE/COQ5 methyltransferase family NodS PF05401.11 ORF85403 - 5.3e-08 32.7 0.0 3.3e-05 23.6 0.0 2.2 2 0 0 2 2 2 2 Nodulation protein S (NodS) TehB PF03848.14 ORF85403 - 3.4e-07 29.9 0.0 4.6e-06 26.2 0.0 2.3 2 1 0 2 2 2 1 Tellurite resistance protein TehB Methyltransf_2 PF00891.18 ORF85403 - 1.1e-05 24.8 0.0 0.083 12.2 0.0 2.5 2 1 0 2 2 2 2 O-methyltransferase domain DUF938 PF06080.12 ORF85403 - 3.2e-05 23.8 0.0 0.0007 19.4 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF938) Methyltransf_29 PF03141.16 ORF85403 - 0.00031 19.4 0.0 0.072 11.6 0.0 2.2 2 0 0 2 2 2 2 Putative S-adenosyl-L-methionine-dependent methyltransferase TPMT PF05724.11 ORF85403 - 0.00078 19.2 0.1 0.83 9.3 0.0 2.9 2 1 0 2 2 2 2 Thiopurine S-methyltransferase (TPMT) FtsJ PF01728.19 ORF85403 - 0.00085 19.5 0.0 0.017 15.2 0.0 2.6 2 1 0 2 2 2 1 FtsJ-like methyltransferase Methyltransf_16 PF10294.9 ORF85403 - 0.0029 17.3 0.1 0.12 12.1 0.0 2.5 2 0 0 2 2 2 1 Lysine methyltransferase RrnaAD PF00398.20 ORF85403 - 0.0089 15.1 0.0 0.019 14.1 0.0 1.5 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase CMAS PF02353.20 ORF85403 - 0.011 15.0 0.0 2.2 7.5 0.0 2.6 2 1 0 2 2 2 0 Mycolic acid cyclopropane synthetase DUF3419 PF11899.8 ORF85403 - 0.022 14.0 0.0 5.9 6.0 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3419) PCMT PF01135.19 ORF85403 - 0.023 14.4 0.1 9.8 5.9 0.0 2.5 3 0 0 3 3 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_9 PF08003.11 ORF85403 - 0.052 12.5 0.0 0.087 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) NNMT_PNMT_TEMT PF01234.17 ORF85403 - 0.059 12.5 0.0 12 5.0 0.0 3.4 3 1 1 4 4 4 0 NNMT/PNMT/TEMT family Bin3 PF06859.12 ORF85403 - 0.12 13.0 0.0 17 6.1 0.0 2.6 2 0 0 2 2 2 0 Bicoid-interacting protein 3 (Bin3) Met_10 PF02475.16 ORF85403 - 0.19 11.5 0.0 0.33 10.7 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein AAA PF00004.29 ORF74864 - 3.5e-77 257.2 0.0 9e-46 155.6 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF74864 - 4.3e-25 87.3 6.9 5.7e-12 45.3 0.2 3.1 2 2 0 2 2 2 2 AAA+ lid domain AAA_2 PF07724.14 ORF74864 - 9.8e-09 35.6 0.0 0.0025 18.0 0.1 2.7 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 ORF74864 - 1e-06 29.2 0.1 0.0013 19.1 0.0 3.5 3 1 1 4 4 3 1 AAA ATPase domain RuvB_N PF05496.12 ORF74864 - 9.5e-06 25.4 0.0 0.00012 21.8 0.0 2.6 3 1 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 ORF74864 - 8.2e-05 22.6 0.3 0.045 13.7 0.0 3.3 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) Vps4_C PF09336.10 ORF74864 - 0.00016 21.6 0.1 0.0089 16.0 0.0 2.6 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_22 PF13401.6 ORF74864 - 0.00034 20.9 0.1 0.11 12.7 0.0 3.4 2 1 2 4 4 4 1 AAA domain AAA_14 PF13173.6 ORF74864 - 0.00067 19.7 0.0 0.11 12.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF74864 - 0.0017 18.5 0.0 0.0063 16.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF74864 - 0.0024 17.6 0.0 0.0045 16.8 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 ORF74864 - 0.0035 16.9 0.1 0.25 10.9 0.0 2.5 2 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 ORF74864 - 0.0037 17.6 0.0 0.0099 16.3 0.0 1.8 1 0 0 1 1 1 1 RNA helicase TIP49 PF06068.13 ORF74864 - 0.0071 15.6 0.0 0.015 14.5 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain Bac_DnaA PF00308.18 ORF74864 - 0.0075 16.1 0.0 4.9 6.9 0.0 2.6 3 0 0 3 3 2 1 Bacterial dnaA protein Mg_chelatase PF01078.21 ORF74864 - 0.01 15.2 0.0 0.024 14.0 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 ORF74864 - 0.016 15.8 0.0 0.048 14.2 0.0 1.8 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 ORF74864 - 0.016 15.1 0.0 0.48 10.3 0.0 2.4 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea KAP_NTPase PF07693.14 ORF74864 - 0.037 13.3 0.0 0.48 9.6 0.0 2.3 2 1 1 3 3 3 0 KAP family P-loop domain NACHT PF05729.12 ORF74864 - 0.041 13.8 0.0 0.32 10.9 0.0 2.2 1 1 0 2 2 2 0 NACHT domain IstB_IS21 PF01695.17 ORF74864 - 0.045 13.5 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF74864 - 0.046 13.2 0.0 0.18 11.3 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF74864 - 0.053 14.0 0.0 0.19 12.2 0.0 1.9 2 0 0 2 2 2 0 ABC transporter DUF815 PF05673.13 ORF74864 - 0.065 12.4 0.0 0.17 11.0 0.0 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF815) AAA_28 PF13521.6 ORF74864 - 0.069 13.4 0.0 0.17 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF74864 - 0.086 12.5 0.0 3 7.5 0.0 2.8 2 1 0 2 2 2 0 Sigma-54 interaction domain ATPase PF06745.13 ORF74864 - 0.09 12.1 0.0 1.2 8.4 0.0 2.2 2 0 0 2 2 2 0 KaiC NTPase_1 PF03266.15 ORF74864 - 0.096 12.6 0.5 3.9 7.4 0.0 2.9 3 0 0 3 3 3 0 NTPase Rad17 PF03215.15 ORF74864 - 0.12 12.3 0.0 0.65 9.9 0.0 2.2 3 0 0 3 3 3 0 Rad17 P-loop domain TsaE PF02367.17 ORF74864 - 0.16 12.0 0.0 0.43 10.6 0.0 1.6 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 ORF74864 - 0.18 10.9 0.0 0.28 10.2 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 MIF4G_like_2 PF09090.11 ORF74845 - 1.3e-17 64.1 0.1 3.1e-15 56.4 0.0 2.2 2 0 0 2 2 2 2 MIF4G like MIF4G_like PF09088.11 ORF74845 - 1e-09 38.5 0.2 1.7e-08 34.5 0.1 2.9 2 2 1 3 3 3 1 MIF4G like MA3 PF02847.17 ORF74845 - 0.0049 16.8 2.8 0.015 15.2 0.3 2.7 3 0 0 3 3 3 1 MA3 domain Methyltransf_11 PF08241.12 ORF72505 - 5e-27 94.4 0.0 3.2e-15 56.6 0.0 2.6 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.6 ORF72505 - 9.8e-27 93.5 0.0 1.2e-16 61.2 0.0 2.9 3 0 0 3 3 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 ORF72505 - 1.4e-21 77.0 0.0 5.9e-10 39.2 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_12 PF08242.12 ORF72505 - 1.3e-20 73.9 0.0 2.1e-09 38.0 0.0 2.6 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_31 PF13847.6 ORF72505 - 5.1e-20 71.8 0.0 2.8e-10 40.2 0.0 2.5 2 0 0 2 2 2 2 Methyltransferase domain CheR PF01739.18 ORF72505 - 6.7e-11 42.0 0.0 1.7e-05 24.4 0.0 2.6 2 0 0 2 2 2 2 CheR methyltransferase, SAM binding domain Methyltransf_PK PF05891.12 ORF72505 - 6.1e-09 35.7 0.0 4.3e-08 33.0 0.0 2.1 2 0 0 2 2 2 1 AdoMet dependent proline di-methyltransferase MTS PF05175.14 ORF72505 - 7.7e-09 35.3 0.0 6.5e-05 22.5 0.0 3.2 3 0 0 3 3 3 1 Methyltransferase small domain Ubie_methyltran PF01209.18 ORF72505 - 2.7e-08 33.4 0.0 0.0059 16.0 0.0 2.3 2 0 0 2 2 2 2 ubiE/COQ5 methyltransferase family NodS PF05401.11 ORF72505 - 5.3e-08 32.7 0.0 3.3e-05 23.6 0.0 2.2 2 0 0 2 2 2 2 Nodulation protein S (NodS) TehB PF03848.14 ORF72505 - 3.4e-07 29.9 0.0 4.6e-06 26.2 0.0 2.3 2 1 0 2 2 2 1 Tellurite resistance protein TehB Methyltransf_2 PF00891.18 ORF72505 - 1.1e-05 24.8 0.0 0.083 12.2 0.0 2.5 2 1 0 2 2 2 2 O-methyltransferase domain DUF938 PF06080.12 ORF72505 - 3.2e-05 23.8 0.0 0.0007 19.4 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF938) Methyltransf_29 PF03141.16 ORF72505 - 0.00031 19.4 0.0 0.072 11.6 0.0 2.2 2 0 0 2 2 2 2 Putative S-adenosyl-L-methionine-dependent methyltransferase TPMT PF05724.11 ORF72505 - 0.00078 19.2 0.1 0.83 9.3 0.0 2.9 2 1 0 2 2 2 2 Thiopurine S-methyltransferase (TPMT) FtsJ PF01728.19 ORF72505 - 0.00085 19.5 0.0 0.017 15.2 0.0 2.6 2 1 0 2 2 2 1 FtsJ-like methyltransferase Methyltransf_16 PF10294.9 ORF72505 - 0.0029 17.3 0.1 0.12 12.1 0.0 2.5 2 0 0 2 2 2 1 Lysine methyltransferase RrnaAD PF00398.20 ORF72505 - 0.0089 15.1 0.0 0.019 14.1 0.0 1.5 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase CMAS PF02353.20 ORF72505 - 0.011 15.0 0.0 2.2 7.5 0.0 2.6 2 1 0 2 2 2 0 Mycolic acid cyclopropane synthetase DUF3419 PF11899.8 ORF72505 - 0.022 14.0 0.0 5.9 6.0 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3419) PCMT PF01135.19 ORF72505 - 0.023 14.4 0.1 9.8 5.9 0.0 2.5 3 0 0 3 3 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_9 PF08003.11 ORF72505 - 0.052 12.5 0.0 0.087 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) NNMT_PNMT_TEMT PF01234.17 ORF72505 - 0.059 12.5 0.0 12 5.0 0.0 3.4 3 1 1 4 4 4 0 NNMT/PNMT/TEMT family Bin3 PF06859.12 ORF72505 - 0.12 13.0 0.0 17 6.1 0.0 2.6 2 0 0 2 2 2 0 Bicoid-interacting protein 3 (Bin3) Met_10 PF02475.16 ORF72505 - 0.19 11.5 0.0 0.33 10.7 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein Perilipin PF03036.16 ORF65535 - 2.1 7.3 9.2 8.6 5.3 9.2 1.9 1 1 0 1 1 1 0 Perilipin family Na_Ca_ex PF01699.24 ORF43950 - 1.1e-11 45.0 27.5 6.5e-06 26.2 7.8 2.4 2 1 0 2 2 2 2 Sodium/calcium exchanger protein DUF4298 PF14131.6 ORF43950 - 0.097 12.6 2.5 0.092 12.7 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) FIST_C PF10442.9 ORF34598 - 3.4e-18 65.9 0.0 7.9e-18 64.7 0.0 1.7 1 0 0 1 1 1 1 FIST C domain FIST PF08495.10 ORF34598 - 1e-11 45.1 2.6 3.2e-11 43.5 1.1 2.1 2 0 0 2 2 2 1 FIST N domain TPR_12 PF13424.6 ORF2726 - 7.5e-16 58.2 28.6 9.2e-07 29.1 0.2 5.9 3 3 4 7 7 7 7 Tetratricopeptide repeat PP-binding PF00550.25 ORF2726 - 3.9e-08 33.5 0.1 9.8e-08 32.2 0.1 1.7 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_MalT PF17874.1 ORF2726 - 5.1e-08 32.7 25.3 2e-06 27.4 4.6 3.9 2 1 3 5 5 5 3 MalT-like TPR region ANAPC3 PF12895.7 ORF2726 - 7.9e-05 22.8 10.7 0.19 12.0 1.2 5.0 2 2 1 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 SNAP PF14938.6 ORF2726 - 0.00022 20.8 24.4 0.0011 18.4 5.0 3.3 1 1 1 3 3 3 3 Soluble NSF attachment protein, SNAP TPR_14 PF13428.6 ORF2726 - 0.025 15.4 27.2 1.2 10.1 0.5 8.1 5 2 3 8 8 8 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF2726 - 0.027 14.3 0.8 0.027 14.3 0.8 7.3 8 0 0 8 8 8 0 Tetratricopeptide repeat ATP13 PF12921.7 ORF2726 - 0.066 13.1 0.9 16 5.4 0.1 3.4 4 0 0 4 4 4 0 Mitochondrial ATPase expression DUF5099 PF17025.5 ORF2726 - 0.079 13.4 0.1 0.21 12.0 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5099) TPR_1 PF00515.28 ORF2726 - 0.11 12.3 9.8 8.1 6.5 0.0 5.2 5 0 0 5 5 5 0 Tetratricopeptide repeat HicB_lk_antitox PF15919.5 ORF2726 - 0.15 12.2 0.7 11 6.2 0.0 3.0 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system TPR_2 PF07719.17 ORF2726 - 0.75 10.1 27.4 0.72 10.1 0.1 7.0 9 0 0 9 9 9 0 Tetratricopeptide repeat AAA PF00004.29 ORF17529 - 3.5e-77 257.2 0.0 9e-46 155.6 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF17529 - 4.3e-25 87.3 6.9 5.7e-12 45.3 0.2 3.1 2 2 0 2 2 2 2 AAA+ lid domain AAA_2 PF07724.14 ORF17529 - 9.8e-09 35.6 0.0 0.0025 18.0 0.1 2.7 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 ORF17529 - 1e-06 29.2 0.1 0.0013 19.1 0.0 3.5 3 1 1 4 4 3 1 AAA ATPase domain RuvB_N PF05496.12 ORF17529 - 9.5e-06 25.4 0.0 0.00012 21.8 0.0 2.6 3 1 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 ORF17529 - 8.2e-05 22.6 0.3 0.045 13.7 0.0 3.3 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) Vps4_C PF09336.10 ORF17529 - 0.00016 21.6 0.1 0.0089 16.0 0.0 2.6 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_22 PF13401.6 ORF17529 - 0.00034 20.9 0.1 0.11 12.7 0.0 3.4 2 1 2 4 4 4 1 AAA domain AAA_14 PF13173.6 ORF17529 - 0.00067 19.7 0.0 0.11 12.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF17529 - 0.0017 18.5 0.0 0.0063 16.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF17529 - 0.0024 17.6 0.0 0.0045 16.8 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 ORF17529 - 0.0035 16.9 0.1 0.25 10.9 0.0 2.5 2 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 ORF17529 - 0.0037 17.6 0.0 0.0099 16.3 0.0 1.8 1 0 0 1 1 1 1 RNA helicase TIP49 PF06068.13 ORF17529 - 0.0071 15.6 0.0 0.015 14.5 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain Bac_DnaA PF00308.18 ORF17529 - 0.0075 16.1 0.0 4.9 6.9 0.0 2.6 3 0 0 3 3 2 1 Bacterial dnaA protein Mg_chelatase PF01078.21 ORF17529 - 0.01 15.2 0.0 0.024 14.0 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 ORF17529 - 0.016 15.8 0.0 0.048 14.2 0.0 1.8 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 ORF17529 - 0.016 15.1 0.0 0.48 10.3 0.0 2.4 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea KAP_NTPase PF07693.14 ORF17529 - 0.037 13.3 0.0 0.48 9.6 0.0 2.3 2 1 1 3 3 3 0 KAP family P-loop domain NACHT PF05729.12 ORF17529 - 0.041 13.8 0.0 0.32 10.9 0.0 2.2 1 1 0 2 2 2 0 NACHT domain IstB_IS21 PF01695.17 ORF17529 - 0.045 13.5 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF17529 - 0.046 13.2 0.0 0.18 11.3 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF17529 - 0.053 14.0 0.0 0.19 12.2 0.0 1.9 2 0 0 2 2 2 0 ABC transporter DUF815 PF05673.13 ORF17529 - 0.065 12.4 0.0 0.17 11.0 0.0 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF815) AAA_28 PF13521.6 ORF17529 - 0.069 13.4 0.0 0.17 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF17529 - 0.086 12.5 0.0 3 7.5 0.0 2.8 2 1 0 2 2 2 0 Sigma-54 interaction domain ATPase PF06745.13 ORF17529 - 0.09 12.1 0.0 1.2 8.4 0.0 2.2 2 0 0 2 2 2 0 KaiC NTPase_1 PF03266.15 ORF17529 - 0.096 12.6 0.5 3.9 7.4 0.0 2.9 3 0 0 3 3 3 0 NTPase Rad17 PF03215.15 ORF17529 - 0.12 12.3 0.0 0.65 9.9 0.0 2.2 3 0 0 3 3 3 0 Rad17 P-loop domain TsaE PF02367.17 ORF17529 - 0.16 12.0 0.0 0.43 10.6 0.0 1.6 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 ORF17529 - 0.18 10.9 0.0 0.28 10.2 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 p450 PF00067.22 ORF16924 - 1.5e-57 195.4 1.1 7.8e-57 193.0 0.1 2.0 2 0 0 2 2 2 1 Cytochrome P450 Ubiq_cyt_C_chap PF03981.12 ORF16924 - 0.088 12.9 0.0 0.19 11.8 0.0 1.6 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone FAST_1 PF06743.15 ORF110043 - 2.2e-05 24.3 1.2 18 5.4 0.0 5.1 4 1 2 6 6 6 4 FAST kinase-like protein, subdomain 1 DUF758 PF05527.11 ORF110043 - 0.14 12.1 0.0 0.34 10.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF758) NAGLU PF05089.12 ORF105877 - 1.1e-76 258.0 0.3 1.5e-76 257.6 0.3 1.2 1 0 0 1 1 1 1 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain NAGLU_C PF12972.7 ORF105877 - 6.2e-61 206.3 0.0 9e-61 205.7 0.0 1.2 1 0 0 1 1 1 1 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain TPR_12 PF13424.6 ORF101892 - 7.7e-16 58.2 28.6 9.2e-07 29.1 0.2 5.9 3 3 4 7 7 7 7 Tetratricopeptide repeat PP-binding PF00550.25 ORF101892 - 9.2e-10 38.7 0.1 2.1e-09 37.6 0.1 1.7 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_MalT PF17874.1 ORF101892 - 5.1e-08 32.7 25.3 2e-06 27.4 4.6 3.9 2 1 3 5 5 5 3 MalT-like TPR region ANAPC3 PF12895.7 ORF101892 - 7.9e-05 22.8 10.7 0.19 12.0 1.2 5.0 2 2 1 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 SNAP PF14938.6 ORF101892 - 0.00022 20.8 24.4 0.0011 18.4 5.0 3.3 1 1 1 3 3 3 3 Soluble NSF attachment protein, SNAP TPR_14 PF13428.6 ORF101892 - 0.026 15.3 27.2 1.2 10.1 0.5 8.1 5 2 3 8 8 8 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF101892 - 0.027 14.3 0.8 0.027 14.3 0.8 7.3 8 0 0 8 8 8 0 Tetratricopeptide repeat ATP13 PF12921.7 ORF101892 - 0.065 13.1 0.9 16 5.4 0.1 3.4 4 0 0 4 4 4 0 Mitochondrial ATPase expression DUF5099 PF17025.5 ORF101892 - 0.079 13.4 0.1 0.21 12.0 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5099) TPR_1 PF00515.28 ORF101892 - 0.11 12.3 9.8 8.1 6.5 0.0 5.2 5 0 0 5 5 5 0 Tetratricopeptide repeat HicB_lk_antitox PF15919.5 ORF101892 - 0.15 12.2 0.7 11 6.2 0.0 3.0 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system TPR_2 PF07719.17 ORF101892 - 0.74 10.1 27.4 0.72 10.1 0.1 7.0 9 0 0 9 9 9 0 Tetratricopeptide repeat Ion_trans PF00520.31 ORF90556 - 4.6e-15 55.5 2.5 6.2e-15 55.1 2.5 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF90556 - 4.1e-11 41.6 0.2 0.00034 19.9 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF90556 - 1.7e-10 39.9 0.4 0.0003 20.1 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF90556 - 1.8e-09 36.8 0.1 0.004 17.0 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF90556 - 1e-08 35.5 1.3 2.7e-08 34.1 1.3 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF90556 - 1.4e-05 24.9 0.0 0.01 15.6 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF90556 - 0.081 12.8 1.1 0.89 9.5 0.1 2.4 2 0 0 2 2 2 0 EF hand DPM3 PF08285.11 ORF90556 - 0.39 11.0 2.9 5.8 7.2 2.9 2.3 1 1 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF5109 PF17134.4 ORF88864 - 0.011 15.7 1.2 0.033 14.1 1.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF5109) EF-hand_1 PF00036.32 ORF88864 - 0.078 12.6 5.4 0.043 13.4 2.5 2.1 2 0 0 2 2 2 0 EF hand MT0933_antitox PF14013.6 ORF88864 - 0.3 11.4 2.7 1.4 9.2 0.5 3.3 3 0 0 3 3 3 0 MT0933-like antitoxin protein Pepsin-I3 PF06394.13 ORF88864 - 5.7 7.2 7.1 18 5.6 0.3 3.0 2 1 1 3 3 3 0 Pepsin inhibitor-3-like repeated domain PARP PF00644.20 ORF85480 - 5e-19 68.7 0.2 4.7e-18 65.5 0.2 2.2 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain EF-hand_1 PF00036.32 ORF85480 - 6.9e-08 31.5 0.0 0.0014 18.0 0.0 2.9 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF85480 - 6.2e-07 28.8 0.0 0.015 15.2 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF85480 - 0.00025 21.4 0.0 0.00089 19.7 0.0 2.0 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF85480 - 0.00029 20.6 0.1 0.51 10.2 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF85480 - 0.0023 17.3 3.2 0.024 14.1 0.1 2.8 3 0 0 3 3 3 1 EF hand ART-PolyVal PF18760.1 ORF85480 - 0.12 13.4 0.0 0.3 12.1 0.0 1.6 1 0 0 1 1 1 0 ADP-Ribosyltransferase in polyvalent proteins p450 PF00067.22 ORF80135 - 2.2e-42 145.4 0.1 2.6e-42 145.1 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF5442 PF17514.2 ORF80135 - 0.13 12.4 0.1 1.4 9.2 0.0 2.4 1 1 0 2 2 2 0 Family of unknown function (DUF5442) p450 PF00067.22 ORF48944 - 1.8e-50 172.1 1.1 2.7e-50 171.5 1.1 1.2 1 0 0 1 1 1 1 Cytochrome P450 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks13.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks13.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks13.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks13.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Mito_morph_reg PF14972.6 NODE_42710_length_473_cov_159.219178_g35080_i0reverse_frame_3 - 0.064 12.9 0.1 0.094 12.3 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator Phage_holin_2_3 PF16080.5 NODE_42710_length_473_cov_159.219178_g35080_i0reverse_frame_3 - 5.5 6.8 6.7 0.25 11.2 0.8 1.7 2 0 0 2 2 2 0 Bacteriophage holin family HP1 TFIIS_C PF01096.18 NODE_42705_length_473_cov_274.913242_g35075_i0reverse_frame_2 - 1.3e-14 53.8 0.1 1.3e-14 53.8 0.1 1.9 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS) Baculo_LEF5_C PF11792.8 NODE_42705_length_473_cov_274.913242_g35075_i0reverse_frame_2 - 0.014 15.1 0.0 0.03 14.0 0.0 1.6 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 C-terminal domain SBP_bac_8 PF13416.6 NODE_42694_length_474_cov_1.774487_g35068_i0forward_frame_2 - 1.3e-08 35.0 0.0 1.7e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein CshA_NR2 PF18651.1 NODE_42693_length_474_cov_1.972665_g35067_i0reverse_frame_2 - 0.19 10.9 0.1 0.24 10.5 0.1 1.1 1 0 0 1 1 1 0 Surface adhesin CshA non-repetitive domain 2 LAMTOR PF15454.6 NODE_42691_length_474_cov_2.054670_g35065_i0forward_frame_3 - 0.05 14.2 0.5 0.083 13.5 0.5 1.3 1 0 0 1 1 1 0 Late endosomal/lysosomal adaptor and MAPK and MTOR activator DUF1854 PF08909.11 NODE_42691_length_474_cov_2.054670_g35065_i0forward_frame_2 - 0.083 12.7 0.1 0.25 11.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1854) Aph-1 PF06105.12 NODE_42684_length_474_cov_2.735763_g35058_i0reverse_frame_3 - 0.055 12.9 0.1 0.069 12.5 0.1 1.1 1 0 0 1 1 1 0 Aph-1 protein OSK PF17182.4 NODE_42684_length_474_cov_2.735763_g35058_i0reverse_frame_2 - 0.07 12.4 0.0 0.094 11.9 0.0 1.1 1 0 0 1 1 1 0 OSK domain MTABC_N PF16185.5 NODE_42684_length_474_cov_2.735763_g35058_i0forward_frame_2 - 0.07 12.6 1.9 0.1 12.1 1.9 1.2 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region DUF2614 PF11023.8 NODE_42684_length_474_cov_2.735763_g35058_i0forward_frame_2 - 0.17 12.0 3.6 0.097 12.8 1.0 1.9 2 1 0 2 2 2 0 Zinc-ribbon containing domain FtsH_ext PF06480.15 NODE_42672_length_474_cov_82.191344_g35046_i0forward_frame_2 - 0.053 13.9 0.1 0.086 13.2 0.1 1.4 1 0 0 1 1 1 0 FtsH Extracellular Mer2 PF09074.10 NODE_42672_length_474_cov_82.191344_g35046_i0forward_frame_2 - 0.095 12.5 1.7 0.37 10.6 0.1 2.0 2 0 0 2 2 2 0 Mer2 Zea_mays_MuDR PF05928.11 NODE_42672_length_474_cov_82.191344_g35046_i0forward_frame_2 - 0.11 12.2 0.1 0.23 11.1 0.0 1.6 2 0 0 2 2 2 0 Zea mays MURB-like protein (MuDR) Abhydrolase_1 PF00561.20 NODE_42670_length_474_cov_90.546697_g35044_i0reverse_frame_3 - 0.0064 16.2 0.0 0.007 16.0 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold CpeS PF09367.10 NODE_42669_length_474_cov_91.867882_g35043_i0forward_frame_3 - 0.018 14.9 1.0 0.16 11.8 0.0 2.1 1 1 1 2 2 2 0 CpeS-like protein Smr PF01713.21 NODE_42667_length_474_cov_96.207289_g35041_i0reverse_frame_2 - 5.9e-10 39.4 0.0 1.1e-09 38.5 0.0 1.4 1 0 0 1 1 1 1 Smr domain Mak16 PF04874.14 NODE_42667_length_474_cov_96.207289_g35041_i0reverse_frame_2 - 0.07 13.7 0.8 0.1 13.2 0.8 1.2 1 0 0 1 1 1 0 Mak16 protein C-terminal region Ephrin_rec_like PF07699.13 NODE_42661_length_474_cov_112.093394_g35036_i0forward_frame_3 - 2.9e-06 26.9 43.4 3.4e-05 23.5 7.9 5.5 1 1 4 5 5 5 2 Putative ephrin-receptor like Lustrin_cystein PF14625.6 NODE_42661_length_474_cov_112.093394_g35036_i0forward_frame_3 - 0.00092 19.5 40.6 0.041 14.3 2.3 6.0 2 1 2 4 4 4 3 Lustrin, cysteine-rich repeated domain DDE_Tnp_1_6 PF13751.6 NODE_42661_length_474_cov_112.093394_g35036_i0forward_frame_3 - 0.12 12.6 10.4 0.51 10.6 1.4 2.6 2 1 0 2 2 2 0 Transposase DDE domain DUF4975 PF16346.5 NODE_42654_length_474_cov_155.687927_g35029_i0reverse_frame_3 - 0.067 13.3 0.1 0.078 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4975) TMEM173 PF15009.6 NODE_42653_length_474_cov_163.282460_g35028_i0forward_frame_3 - 0.17 11.0 1.0 0.19 10.8 1.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 173 DEC-1_N PF04625.13 NODE_42653_length_474_cov_163.282460_g35028_i0forward_frame_2 - 0.17 10.8 0.0 0.2 10.6 0.0 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Herpes_BLRF2 PF05812.12 ORF99986 - 0.022 14.9 0.5 0.061 13.4 0.3 1.8 1 1 0 1 1 1 0 Herpesvirus BLRF2 protein Inositol_P PF00459.25 ORF99975 - 4.8e-11 42.7 0.0 5.7e-11 42.5 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family DUF2417 PF10329.9 ORF99174 - 2.3 7.6 6.0 0.29 10.5 2.4 1.4 2 0 0 2 2 2 0 Region of unknown function (DUF2417) Tropomyosin PF00261.20 ORF96911 - 1.1e-07 31.5 16.8 1.2e-05 24.9 10.0 2.0 1 1 1 2 2 2 2 Tropomyosin Golgin_A5 PF09787.9 ORF96911 - 0.025 14.1 17.0 0.057 12.9 16.6 1.7 1 1 0 1 1 1 0 Golgin subfamily A member 5 DUF3135 PF11333.8 ORF96911 - 0.064 13.5 3.7 0.32 11.3 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3135) DUF1993 PF09351.10 ORF96911 - 0.069 13.3 2.8 0.085 13.0 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) YkyA PF10368.9 ORF96911 - 0.21 11.2 5.5 0.34 10.5 5.5 1.4 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein DUF883 PF05957.13 ORF96911 - 0.24 12.0 11.6 0.37 11.4 4.3 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Prefoldin PF02996.17 ORF96911 - 0.65 9.9 7.7 0.54 10.2 1.0 2.7 3 0 0 3 3 3 0 Prefoldin subunit DUF3584 PF12128.8 ORF96911 - 1.2 6.5 17.2 1.4 6.3 17.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) EMP24_GP25L PF01105.24 ORF96911 - 1.3 9.0 5.6 1.4 8.9 0.5 2.1 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD YabA PF06156.13 ORF96911 - 1.9 9.2 9.7 4 8.1 0.8 2.6 1 1 2 3 3 3 0 Initiation control protein YabA ATP-synt_B PF00430.18 ORF96911 - 2.1 8.5 16.8 0.61 10.2 8.5 2.2 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) Sugarporin_N PF11471.8 ORF96911 - 2.3 8.2 8.7 11 6.1 0.4 2.5 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension SICA_alpha PF12887.7 ORF96911 - 2.6 7.9 6.3 2 8.3 2.5 2.0 1 1 1 2 2 2 0 SICA extracellular alpha domain Exonuc_VII_L PF02601.15 ORF96911 - 4.4 6.8 8.3 5.3 6.5 8.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit VWA_3 PF13768.6 ORF96865 - 2.9e-15 56.5 0.0 3.6e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF96865 - 8.5e-12 45.7 0.0 1.1e-11 45.3 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF96865 - 2.1e-11 44.4 0.0 2.9e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain CobT_C PF11775.8 ORF96865 - 0.18 11.4 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT VWA domain PBP1_TM PF14812.6 ORF96660 - 0.049 14.0 0.3 0.085 13.2 0.3 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Pkinase PF00069.25 ORF9611 - 2.9e-48 164.5 0.1 3.2e-48 164.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9611 - 2.1e-27 96.0 0.0 2.4e-27 95.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF9611 - 5.8e-07 28.6 0.0 7.7e-07 28.2 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF9611 - 6.4e-06 26.3 0.0 1.4e-05 25.1 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF9611 - 8.8e-06 24.9 0.1 1e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF9611 - 0.00018 20.9 0.1 0.00025 20.5 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF9611 - 0.0015 17.9 0.0 0.0024 17.3 0.0 1.3 1 1 0 1 1 1 1 Kinase-like RIO1 PF01163.22 ORF9611 - 0.0054 16.3 0.0 0.016 14.8 0.1 1.7 1 1 1 2 2 2 1 RIO1 family Seadorna_VP7 PF07387.11 ORF9611 - 0.012 14.7 0.0 0.016 14.3 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 zf-ANAPC11 PF12861.7 ORF95894 - 0.01 15.8 1.6 0.024 14.7 0.7 1.9 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Rubredoxin_2 PF18073.1 ORF95894 - 6 6.7 8.4 1.4 8.7 3.6 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain AP_endonuc_2 PF01261.24 ORF95300 - 4.6e-05 23.0 0.0 8.1e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Aspzincin_M35 PF14521.6 ORF93791 - 1e-18 68.3 0.4 7.7e-17 62.2 0.4 2.1 1 1 0 1 1 1 1 Lysine-specific metallo-endopeptidase DUF4396 PF14342.6 ORF93659 - 1.1 9.6 5.3 8.8 6.7 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4396) CCDC106 PF15794.5 ORF9320 - 0.18 11.5 10.4 0.23 11.1 10.4 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 PA14 PF07691.12 ORF9210 - 3e-11 43.3 0.5 3.7e-11 43.0 0.5 1.1 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 ORF9210 - 0.0015 18.9 1.1 0.0053 17.1 0.7 2.1 1 1 0 1 1 1 1 GLEYA domain DUF4361 PF14274.6 ORF9210 - 0.015 15.5 4.0 0.02 15.2 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4361) CAAD PF14159.6 ORF91083 - 0.072 12.9 0.4 0.14 12.0 0.4 1.4 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Pkinase PF00069.25 ORF89458 - 5.3e-30 104.7 0.2 6.4e-30 104.4 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF89458 - 1e-17 64.3 0.1 1.2e-17 64.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF89458 - 1.1e-06 28.1 0.0 1.5e-06 27.7 0.0 1.3 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF89458 - 0.00047 19.0 0.0 0.00057 18.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF89458 - 0.00055 19.4 0.1 0.00072 19.0 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF89458 - 0.00098 19.1 0.0 0.0018 18.3 0.0 1.4 2 0 0 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF89458 - 0.0046 16.6 0.1 0.0086 15.7 0.1 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase Haspin_kinase PF12330.8 ORF89458 - 0.019 13.9 0.0 0.03 13.3 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 ORF89458 - 0.1 12.2 0.2 0.17 11.4 0.0 1.5 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Ank_2 PF12796.7 ORF8874 - 1.4e-24 86.4 1.1 8.8e-12 45.5 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF8874 - 3e-22 78.7 3.6 4.3e-09 36.7 0.1 2.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF8874 - 1.7e-20 72.8 4.3 7.2e-07 29.4 0.2 4.1 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF8874 - 1.9e-17 61.5 0.5 0.002 18.5 0.0 4.2 4 0 0 4 4 4 4 Ankyrin repeat Ank PF00023.30 ORF8874 - 9.3e-14 51.2 6.7 0.0028 18.0 0.0 4.2 3 1 1 4 4 4 4 Ankyrin repeat RNA_pol_Rpb4 PF03874.16 ORF88593 - 0.00021 21.6 0.8 0.0015 18.8 0.0 2.0 2 0 0 2 2 2 1 RNA polymerase Rpb4 CDC45 PF02724.14 ORF88593 - 4.1 5.6 12.6 4.4 5.5 12.6 1.0 1 0 0 1 1 1 0 CDC45-like protein Lipase3_N PF03893.16 ORF87860 - 0.037 14.0 0.1 0.071 13.1 0.1 1.5 1 0 0 1 1 1 0 Lipase 3 N-terminal region Ribosomal_S13 PF00416.22 ORF87117 - 1e-48 164.9 3.3 1.2e-48 164.7 3.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 Armet PF10208.9 ORF87117 - 0.0038 17.1 0.1 0.033 14.1 0.0 1.9 1 1 1 2 2 2 1 Degradation arginine-rich protein for mis-folding FbpA PF05833.11 ORF87117 - 0.084 11.6 0.0 0.087 11.6 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) RHH_1 PF01402.21 ORF86627 - 0.0029 17.5 0.2 0.58 10.2 0.2 2.7 2 0 0 2 2 2 2 Ribbon-helix-helix protein, copG family Metallophos_2 PF12850.7 ORF86305 - 1.9e-11 44.4 0.0 2.5e-11 44.1 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain MerB PF03243.15 ORF85038 - 0.027 14.6 0.0 0.038 14.1 0.0 1.3 1 0 0 1 1 1 0 Alkylmercury lyase SH3_15 PF18346.1 ORF84947 - 0.00068 19.9 1.1 0.0011 19.2 1.1 1.3 1 0 0 1 1 1 1 Mind bomb SH3 repeat domain KOW PF00467.29 ORF84947 - 0.074 13.0 3.2 0.13 12.3 0.5 2.3 2 0 0 2 2 2 0 KOW motif Arf PF00025.21 ORF82340 - 3.7e-35 120.9 0.0 4.2e-35 120.8 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family G-alpha PF00503.20 ORF82340 - 1.3e-09 37.7 0.1 2.2e-09 36.9 0.1 1.6 1 1 0 1 1 1 1 G-protein alpha subunit Ras PF00071.22 ORF82340 - 1.1e-08 34.8 0.0 1.3e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF82340 - 2.2e-07 31.1 0.0 4.5e-07 30.1 0.0 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Gtr1_RagA PF04670.12 ORF82340 - 0.00047 19.6 0.0 0.00057 19.3 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF82340 - 0.0013 18.8 0.0 0.0021 18.1 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF866 PF05907.13 ORF82089 - 4.3e-24 85.2 0.0 4.9e-24 85.0 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF866) Tgi2PP PF18250.1 ORF82089 - 0.023 14.9 0.0 0.17 12.2 0.0 2.2 2 0 0 2 2 2 0 Effector immunity protein Tgi2PP DUF4171 PF13775.6 ORF8141 - 0.011 16.2 1.1 0.017 15.5 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4171) Retrotrans_gag PF03732.17 ORF8141 - 0.11 12.8 4.8 0.069 13.4 2.8 1.8 1 1 0 1 1 1 0 Retrotransposon gag protein DUF16 PF01519.16 ORF8141 - 0.15 12.6 5.6 7.1 7.2 5.6 2.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 KELK PF15796.5 ORF8141 - 0.34 11.4 7.2 0.35 11.3 1.5 2.9 1 1 2 3 3 3 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase SNRNP27 PF08648.12 ORF8141 - 1.5 8.9 8.1 1.1 9.3 2.7 2.3 2 0 0 2 2 2 0 U4/U6.U5 small nuclear ribonucleoproteins DUF4806 PF16064.5 ORF81107 - 0.00049 20.3 0.2 0.0019 18.4 0.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4806) PA14 PF07691.12 ORF79958 - 3e-11 43.3 0.5 3.7e-11 43.0 0.5 1.1 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 ORF79958 - 0.0015 18.9 1.1 0.0053 17.1 0.7 2.1 1 1 0 1 1 1 1 GLEYA domain DUF4361 PF14274.6 ORF79958 - 0.015 15.5 4.0 0.02 15.2 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4361) Peptidase_M28 PF04389.17 ORF77614 - 1.2e-09 38.1 0.0 1.4e-09 38.0 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M28 DUF2811 PF10929.8 ORF77173 - 0.14 12.5 0.5 1.3 9.4 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2811) Ank_2 PF12796.7 ORF74076 - 9.3e-17 61.4 0.1 7.5e-10 39.3 0.1 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF74076 - 3.1e-10 40.1 0.1 4e-09 36.5 0.0 2.2 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF74076 - 1.2e-08 35.4 0.2 1.3e-05 25.6 0.0 2.5 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF74076 - 1.7e-06 28.2 0.0 0.00063 20.1 0.0 2.6 2 1 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF74076 - 4e-06 26.7 0.0 0.0036 17.7 0.0 3.4 3 0 0 3 3 3 1 Ankyrin repeat SBP_bac_1 PF01547.25 ORF72724 - 1.2e-08 35.3 1.7 1.8e-08 34.7 1.7 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 ORF72724 - 1.6e-07 31.3 0.6 1.6e-07 31.3 0.6 1.3 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 ORF72724 - 1e-05 25.1 0.5 1.5e-05 24.6 0.5 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein MORN PF02493.20 ORF71361 - 0.0003 20.5 2.9 0.00035 20.3 0.1 2.6 3 0 0 3 3 3 1 MORN repeat DUF4816 PF16086.5 ORF71361 - 0.039 13.9 1.0 0.039 13.9 1.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4816) CPP1-like PF11833.8 ORF70651 - 0.0081 15.8 0.2 0.012 15.2 0.2 1.4 1 1 0 1 1 1 1 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Pex14_N PF04695.13 ORF70651 - 0.035 14.8 0.5 0.34 11.5 0.1 2.1 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3806 PF12713.7 ORF70651 - 0.12 12.2 0.0 0.37 10.6 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3806) TssO PF17561.2 ORF70651 - 0.12 12.5 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO PBP1_TM PF14812.6 ORF69311 - 0.049 14.0 0.3 0.085 13.2 0.3 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Myb_DNA-bind_6 PF13921.6 ORF67532 - 0.13 12.5 4.2 0.41 10.9 4.2 2.0 1 1 0 1 1 1 0 Myb-like DNA-binding domain PsaA_PsaB PF00223.19 ORF67472 - 1.9e-58 198.3 12.7 2.1e-58 198.2 12.7 1.0 1 0 0 1 1 1 1 Photosystem I psaA/psaB protein SirB PF04247.12 ORF67472 - 0.0076 16.3 2.9 0.016 15.3 2.9 1.6 1 0 0 1 1 1 1 Invasion gene expression up-regulator, SirB DUF2208 PF09973.9 ORF67472 - 0.16 11.6 1.1 0.25 10.9 1.1 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) Tweety PF04906.13 ORF67035 - 0.00032 19.5 0.1 0.026 13.2 0.0 2.0 2 0 0 2 2 2 2 Tweety EphA2_TM PF14575.6 ORF67035 - 0.0025 18.6 0.0 0.057 14.3 0.0 2.1 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain ETRAMP PF09716.10 ORF67035 - 0.0049 16.9 1.3 0.023 14.8 1.3 2.0 1 1 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Glycophorin_A PF01102.18 ORF67035 - 0.013 15.8 3.5 0.019 15.2 0.6 2.4 1 1 1 2 2 2 0 Glycophorin A TMEM154 PF15102.6 ORF67035 - 0.015 15.2 1.3 1.2 9.1 0.1 2.4 1 1 2 3 3 3 0 TMEM154 protein family Orf78 PF06024.12 ORF67035 - 0.019 15.3 0.0 0.055 13.8 0.0 1.8 1 1 2 3 3 3 0 Orf78 (ac78) CD34_antigen PF06365.12 ORF67035 - 0.021 14.4 2.7 0.062 12.9 0.1 2.0 1 1 0 2 2 2 0 CD34/Podocalyxin family FAM104 PF15434.6 ORF67035 - 0.046 14.3 2.7 0.16 12.5 0.3 2.0 2 0 0 2 2 2 0 Family 104 UPF0370 PF13980.6 ORF67035 - 0.16 12.0 0.2 0.16 12.0 0.2 1.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0370) DUF2706 PF10913.8 ORF67035 - 8.6 6.3 7.0 1 9.2 2.7 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2706) Transket_pyr PF02779.24 ORF66302 - 3.6e-16 59.4 0.0 5.1e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain KH_1 PF00013.29 ORF64498 - 1.1e-07 31.6 1.0 0.0074 16.1 0.0 2.4 2 1 0 2 2 2 2 KH domain DUF4908 PF16252.5 ORF64498 - 0.1 12.1 0.3 0.25 10.9 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4908) Roc PF08477.13 ORF63659 - 0.031 14.5 0.1 0.046 13.9 0.1 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase TT_ORF1 PF02956.14 ORF63434 - 4.4 5.8 12.0 5 5.7 12.0 1.1 1 0 0 1 1 1 0 TT viral orf 1 Glyco_hydro_38C PF07748.13 ORF62334 - 1.8e-05 24.9 0.1 0.00015 21.9 0.1 2.0 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 C-terminal domain Ank_5 PF13857.6 ORF61275 - 2.6e-06 27.6 0.0 5.2e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF61275 - 0.00033 21.2 0.0 0.00063 20.3 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF61275 - 0.00035 21.1 0.0 0.00046 20.7 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF61275 - 0.00084 19.7 0.0 0.0022 18.3 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeat Ank_3 PF13606.6 ORF61275 - 0.054 14.1 0.0 0.2 12.3 0.0 1.9 3 0 0 3 3 3 0 Ankyrin repeat Ndc80_HEC PF03801.13 ORF61275 - 0.066 12.8 0.4 0.11 12.1 0.4 1.3 1 0 0 1 1 1 0 HEC/Ndc80p family GyrI-like PF06445.15 ORF60598 - 1.7e-29 103.1 0.2 1.9e-29 103.0 0.2 1.0 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 ORF60598 - 2.8e-26 92.5 0.1 3.1e-26 92.3 0.1 1.0 1 0 0 1 1 1 1 Integron-associated effector binding protein PTSIIB_sorb PF03830.15 ORF60379 - 2.5e-50 170.6 0.1 2.7e-50 170.4 0.1 1.0 1 0 0 1 1 1 1 PTS system sorbose subfamily IIB component Mlp PF03304.13 ORF58327 - 0.013 15.8 3.2 0.1 12.8 3.2 2.2 1 1 0 1 1 1 0 Mlp lipoprotein family Cyt_bd_oxida_II PF02322.15 ORF58050 - 8.1e-24 84.5 13.0 9e-24 84.4 13.0 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II DUF2649 PF10854.8 ORF58050 - 0.5 10.7 4.7 1.3 9.4 4.7 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2649) DUF4489 PF14879.6 ORF5721 - 0.14 12.2 0.0 0.28 11.3 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4489) DUF2417 PF10329.9 ORF5685 - 2.3 7.6 6.0 0.29 10.5 2.4 1.4 2 0 0 2 2 2 0 Region of unknown function (DUF2417) DUF4050 PF13259.6 ORF55833 - 0.12 12.7 2.8 0.14 12.5 2.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4050) DUSP PF06337.12 ORF5540 - 1.5e-05 25.5 0.1 1.5e-05 25.5 0.1 2.0 2 1 0 2 2 2 1 DUSP domain Sialidase PF02973.16 ORF5491 - 0.045 13.2 1.9 0.06 12.8 1.9 1.1 1 0 0 1 1 1 0 Sialidase, N-terminal domain Aldo_ket_red PF00248.21 ORF53086 - 2.3e-21 76.3 1.1 6.2e-19 68.3 1.1 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Sacchrp_dh_NADP PF03435.18 ORF53086 - 0.024 14.9 0.3 6.7 7.0 0.0 2.2 1 1 1 2 2 2 0 Saccharopine dehydrogenase NADP binding domain DUF1510 PF07423.11 ORF53086 - 0.049 13.8 0.1 0.1 12.8 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1510) EF-hand_6 PF13405.6 ORF52152 - 2.3e-08 33.3 0.1 0.00028 20.6 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF52152 - 9.4e-08 31.1 1.0 0.0011 18.4 0.1 3.2 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF52152 - 7.9e-05 23.0 1.6 0.0021 18.5 0.5 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF52152 - 9e-05 22.2 0.1 0.11 12.4 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain pair DUF4860 PF16152.5 ORF52152 - 0.064 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4860) EF-hand_5 PF13202.6 ORF52152 - 0.13 11.8 0.1 1.4 8.6 0.0 2.2 2 0 0 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF52152 - 0.22 11.5 1.2 19 5.3 0.1 2.2 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand ART PF01129.18 ORF5117 - 1.2e-05 24.7 0.0 1.5e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 ORF5117 - 0.0057 16.0 0.0 0.0065 15.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosyltransferase exoenzyme Ras PF00071.22 ORF49891 - 1.4e-26 93.0 0.3 1.7e-26 92.8 0.3 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF49891 - 8e-22 77.7 0.1 1.1e-21 77.3 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF49891 - 4.5e-09 36.0 0.2 5.3e-09 35.8 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF49891 - 4.3e-05 23.0 0.1 5.1e-05 22.7 0.1 1.3 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF49891 - 7.1e-05 22.9 0.0 9.2e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF49891 - 0.00055 19.4 0.1 0.00078 18.9 0.1 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 ORF49891 - 0.0062 16.1 0.2 0.018 14.5 0.2 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B TniB PF05621.11 ORF49891 - 0.01 15.2 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein PduV-EutP PF10662.9 ORF49891 - 0.036 13.8 0.0 0.58 9.9 0.0 2.2 1 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Septin PF00735.18 ORF49891 - 0.05 12.9 0.0 0.086 12.1 0.0 1.4 1 0 0 1 1 1 0 Septin ATPase PF06745.13 ORF49891 - 0.054 12.8 0.0 0.27 10.5 0.0 1.9 2 0 0 2 2 2 0 KaiC AAA_7 PF12775.7 ORF49891 - 0.1 12.1 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region WD40 PF00400.32 ORF48901 - 2.1e-15 56.8 8.6 1.1e-05 26.0 0.2 3.2 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF48901 - 4.6e-05 23.6 1.3 0.025 14.9 0.2 2.5 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain DUF3748 PF12566.8 ORF48901 - 0.035 14.0 0.1 0.11 12.5 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3748) Nucleoporin_N PF08801.11 ORF48901 - 0.037 12.8 1.1 0.77 8.4 0.1 2.3 2 1 1 3 3 3 0 Nup133 N terminal like Nup160 PF11715.8 ORF48901 - 0.064 11.9 0.1 0.098 11.3 0.1 1.3 1 1 0 1 1 1 0 Nucleoporin Nup120/160 DUF4005 PF13178.6 ORF47892 - 0.034 14.8 1.2 0.034 14.8 1.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4005) Pkinase PF00069.25 ORF46803 - 5.3e-30 104.7 0.2 6.4e-30 104.4 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46803 - 1e-17 64.3 0.1 1.2e-17 64.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF46803 - 1.1e-06 28.1 0.0 1.5e-06 27.7 0.0 1.3 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF46803 - 0.00047 19.0 0.0 0.00057 18.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF46803 - 0.00055 19.4 0.1 0.00072 19.0 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF46803 - 0.00098 19.1 0.0 0.0018 18.3 0.0 1.4 2 0 0 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF46803 - 0.0046 16.6 0.1 0.0086 15.7 0.1 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase Haspin_kinase PF12330.8 ORF46803 - 0.019 13.9 0.0 0.03 13.3 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 ORF46803 - 0.1 12.2 0.2 0.17 11.4 0.0 1.5 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Mlp PF03304.13 ORF46621 - 0.013 15.8 3.2 0.1 12.8 3.2 2.2 1 1 0 1 1 1 0 Mlp lipoprotein family DUF4938 PF16292.5 ORF46237 - 0.19 11.0 0.7 0.26 10.5 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4938) DcuC PF03606.15 ORF42158 - 1.4e-46 159.0 24.8 1.5e-46 158.8 24.8 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier CRAL_TRIO_2 PF13716.6 ORF42035 - 3.6e-10 40.1 1.9 4.4e-10 39.8 1.9 1.1 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF223 PF02721.14 ORF41553 - 0.026 14.8 1.0 0.095 13.0 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function DUF223 DUF494 PF04361.13 ORF40400 - 5.5e-58 195.2 4.4 6.2e-58 195.0 4.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF494) CPP1-like PF11833.8 ORF40261 - 0.0081 15.8 0.2 0.012 15.2 0.2 1.4 1 1 0 1 1 1 1 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Pex14_N PF04695.13 ORF40261 - 0.035 14.8 0.5 0.34 11.5 0.1 2.1 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3806 PF12713.7 ORF40261 - 0.12 12.2 0.0 0.37 10.6 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3806) TssO PF17561.2 ORF40261 - 0.12 12.5 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO Phage_holin_2_4 PF16082.5 ORF40187 - 0.95 9.2 3.3 0.25 11.1 0.3 1.6 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Pkinase PF00069.25 ORF39537 - 5.8e-46 157.0 0.0 6.5e-46 156.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39537 - 8.3e-31 107.2 0.0 9.7e-31 107.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF39537 - 1.9e-05 24.1 0.0 2.5e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF39537 - 0.0003 19.7 0.0 0.00036 19.4 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Peptidase_C65 PF10275.9 ORF38719 - 0.013 15.0 1.8 0.016 14.7 1.8 1.2 1 0 0 1 1 1 0 Peptidase C65 Otubain DUF5082 PF16888.5 ORF38630 - 0.0058 16.9 8.0 0.01 16.1 8.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) Viral_alk_exo PF01771.17 ORF38329 - 0.022 13.6 0.2 0.025 13.5 0.2 1.2 1 0 0 1 1 1 0 Viral alkaline exonuclease Babuvirus_MP PF07234.11 ORF38329 - 0.03 14.5 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 Movement and RNA silencing protein tRNA_lig_kinase PF08303.11 ORF37791 - 0.021 14.9 3.1 0.027 14.6 3.1 1.3 1 0 0 1 1 1 0 tRNA ligase kinase domain AcylCoA_dehyd_C PF12186.8 ORF37791 - 0.61 10.2 7.3 2.6 8.2 0.6 2.3 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase C terminal Pribosyltran PF00156.27 ORF37603 - 2e-13 50.2 0.0 2.5e-13 49.8 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF37603 - 0.016 14.7 0.0 0.018 14.5 0.0 1.1 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 ORF37603 - 0.019 14.5 0.0 0.025 14.1 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase zf-B_box PF00643.24 ORF37600 - 0.0063 16.6 6.5 0.0063 16.6 6.5 1.8 2 0 0 2 2 2 1 B-box zinc finger zf-HIT PF04438.16 ORF37600 - 0.031 14.2 13.5 0.11 12.4 1.9 2.6 1 1 1 2 2 2 0 HIT zinc finger IBR PF01485.21 ORF37600 - 0.75 10.1 10.2 1.6 9.0 10.2 1.5 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain SRP68 PF16969.5 ORF37569 - 4.2e-06 26.1 0.1 4.6e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 RNA-binding signal recognition particle 68 Spc24 PF08286.11 ORF37108 - 0.053 13.8 0.4 0.066 13.5 0.4 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 IKKbetaNEMObind PF12179.8 ORF37108 - 0.077 13.0 5.4 0.42 10.7 1.8 2.6 1 1 1 2 2 2 0 I-kappa-kinase-beta NEMO binding domain Fer4 PF00037.27 ORF36726 - 2.1e-12 46.3 44.8 4.1e-07 29.5 1.3 6.2 7 0 0 7 7 7 4 4Fe-4S binding domain Fer4_11 PF13247.6 ORF36726 - 5.9e-12 45.6 18.1 5.9e-12 45.6 18.1 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF36726 - 1.1e-11 44.3 38.0 1.8e-05 24.6 1.0 5.0 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 ORF36726 - 2.8e-11 43.4 35.5 1.4e-07 31.6 9.7 2.8 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF36726 - 1.5e-10 41.5 59.7 2.7e-06 27.9 11.5 3.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF36726 - 1.4e-08 34.7 37.3 1.3e-06 28.4 10.8 3.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF36726 - 2.8e-08 33.4 36.0 4.6e-05 23.3 0.9 4.6 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 ORF36726 - 3e-08 33.7 38.9 0.00087 19.4 4.7 4.2 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF36726 - 3.4e-07 31.1 34.3 0.021 15.7 1.9 4.4 3 1 1 4 4 4 4 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 ORF36726 - 6.6e-07 29.8 46.6 0.011 16.7 4.6 4.9 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_8 PF13183.6 ORF36726 - 0.00016 22.0 36.0 0.0036 17.7 14.1 3.3 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF36726 - 0.00023 21.4 3.0 0.00023 21.4 3.0 5.7 4 2 0 4 4 4 2 4Fe-4S binding domain Fer4_15 PF13459.6 ORF36726 - 0.065 14.0 1.9 0.065 14.0 1.9 4.4 3 2 0 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 ORF36726 - 0.11 13.1 1.5 0.11 13.1 1.5 5.3 4 1 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 ORF36726 - 5 7.8 37.3 0.38 11.3 2.0 4.2 1 1 5 6 6 6 0 4Fe-4S dicluster domain ERAP1_C PF11838.8 ORF36296 - 0.00048 19.8 0.1 0.00054 19.6 0.1 1.0 1 0 0 1 1 1 1 ERAP1-like C-terminal domain XPA_C PF05181.12 ORF36070 - 0.031 14.2 1.0 0.27 11.2 0.3 2.5 1 1 1 2 2 2 0 XPA protein C-terminus UCH PF00443.29 ORF35706 - 6.1e-11 42.3 1.5 7.3e-11 42.1 1.5 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UPF0016 PF01169.19 ORF34403 - 6.4e-17 61.7 5.0 7.8e-17 61.4 5.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family UPF0016 MFS_1 PF07690.16 ORF34403 - 0.00085 18.3 0.0 0.00094 18.2 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily 12TM_1 PF09847.9 ORF34403 - 0.077 12.1 4.6 0.089 11.9 4.6 1.1 1 0 0 1 1 1 0 Membrane protein of 12 TMs Ribosomal_S13 PF00416.22 ORF33378 - 1e-48 164.9 3.3 1.2e-48 164.7 3.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 Armet PF10208.9 ORF33378 - 0.0038 17.1 0.1 0.033 14.1 0.0 1.9 1 1 1 2 2 2 1 Degradation arginine-rich protein for mis-folding FbpA PF05833.11 ORF33378 - 0.084 11.6 0.0 0.087 11.6 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) FtsK_SpoIIIE PF01580.18 ORF33039 - 0.027 13.8 0.0 0.034 13.5 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family Ank_4 PF13637.6 ORF32081 - 1.3e-06 28.8 0.0 4.2e-06 27.2 0.0 1.9 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF32081 - 6.8e-06 26.3 0.0 3.2e-05 24.1 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF32081 - 8.5e-06 26.3 0.0 1.3e-05 25.7 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF32081 - 0.00019 21.6 0.0 0.0013 19.0 0.0 2.3 3 0 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF32081 - 0.00044 20.6 0.1 0.0025 18.2 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeat GalP_UDP_tr_C PF02744.17 ORF32081 - 0.07 12.9 0.1 0.088 12.5 0.1 1.2 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain DUF1296 PF06972.11 ORF32081 - 0.11 12.6 0.2 1.5 9.0 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1296) DUF4519 PF15012.6 ORF32081 - 0.51 10.5 0.1 0.51 10.5 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4519) DUF2370 PF10176.9 ORF31273 - 0.042 13.5 0.2 0.08 12.6 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) PIG-Y PF15159.6 ORF31273 - 0.32 12.0 8.5 0.088 13.7 2.9 2.3 1 1 1 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y ATP1G1_PLM_MAT8 PF02038.16 ORF31273 - 2.1 7.8 4.0 5.6 6.5 2.2 2.3 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family DUF5536 PF17688.1 ORF29100 - 0.032 14.1 2.0 0.04 13.8 2.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5536) Chorion_2 PF03964.15 ORF29100 - 7 7.5 7.9 12 6.8 7.9 1.4 1 0 0 1 1 1 0 Chorion family 2 ATP-synt_S1 PF05827.12 ORF28881 - 0.046 13.5 0.1 0.077 12.8 0.1 1.3 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) DUF3592 PF12158.8 ORF28881 - 0.14 12.2 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) Pkinase PF00069.25 ORF28632 - 0.00075 18.9 0.0 0.0011 18.4 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain mRNA_cap_C PF03919.15 ORF27144 - 0.019 15.6 2.0 0.019 15.6 2.0 2.0 1 1 1 2 2 2 0 mRNA capping enzyme, C-terminal domain WD40 PF00400.32 ORF26723 - 0.0026 18.6 0.5 6.5 7.8 0.0 3.2 4 0 0 4 4 4 2 WD domain, G-beta repeat MFS_1 PF07690.16 ORF25168 - 2.2e-12 46.6 9.8 3e-12 46.2 9.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF25168 - 0.00032 19.4 5.3 0.00032 19.4 5.3 1.3 1 1 0 1 1 1 1 MFS/sugar transport protein ATG22 PF11700.8 ORF25168 - 0.097 11.3 8.2 0.22 10.1 1.6 2.2 1 1 0 2 2 2 0 Vacuole effluxer Atg22 like FUSC_2 PF13515.6 ORF25168 - 0.58 10.3 16.2 0.07 13.3 8.4 2.2 1 1 1 2 2 2 0 Fusaric acid resistance protein-like Zn_ribbon_SprT PF17283.2 ORF24714 - 1.2 9.1 8.5 0.094 12.6 2.5 2.3 2 0 0 2 2 2 0 SprT-like zinc ribbon domain SAM_3 PF18016.1 ORF24610 - 0.024 14.4 0.2 0.042 13.7 0.2 1.4 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) WW PF00397.26 ORF23615 - 3.9e-06 26.8 0.6 6e-06 26.2 0.0 1.6 2 0 0 2 2 2 1 WW domain MFS_1 PF07690.16 ORF23509 - 2.2e-12 46.6 9.8 3e-12 46.2 9.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF23509 - 0.00032 19.4 5.3 0.00032 19.4 5.3 1.3 1 1 0 1 1 1 1 MFS/sugar transport protein ATG22 PF11700.8 ORF23509 - 0.097 11.3 8.2 0.22 10.1 1.6 2.2 1 1 0 2 2 2 0 Vacuole effluxer Atg22 like FUSC_2 PF13515.6 ORF23509 - 0.58 10.3 16.2 0.07 13.3 8.4 2.2 1 1 1 2 2 2 0 Fusaric acid resistance protein-like PI3_PI4_kinase PF00454.27 ORF22350 - 1.2e-25 90.8 0.1 1.4e-25 90.6 0.1 1.0 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 ORF22350 - 0.00038 19.9 0.1 0.00064 19.1 0.1 1.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4135) DHHC PF01529.20 ORF22230 - 4.5e-15 55.9 4.1 2.9e-13 50.1 4.1 2.1 1 1 0 1 1 1 1 DHHC palmitoyltransferase DUF2157 PF09925.9 ORF22230 - 0.11 12.2 5.3 0.15 11.8 5.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Tad PF13400.6 ORF22230 - 0.7 10.3 10.6 0.8 10.1 2.1 2.2 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Pkinase PF00069.25 ORF20971 - 7.3e-13 48.5 0.0 9.9e-13 48.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF20971 - 3.6e-07 29.7 0.0 6.7e-07 28.9 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase DUF4494 PF14902.6 ORF20665 - 0.0028 17.5 0.8 0.004 17.0 0.8 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4494) SPATIAL PF15256.6 ORF20665 - 0.022 15.1 0.9 0.029 14.7 0.9 1.1 1 0 0 1 1 1 0 SPATIAL SQHop_cyclase_C PF13243.6 ORF20665 - 0.047 12.8 0.0 0.058 12.5 0.0 1.1 1 0 0 1 1 1 0 Squalene-hopene cyclase C-terminal domain Pkinase PF00069.25 ORF17449 - 2.9e-48 164.5 0.1 3.2e-48 164.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF17449 - 2.1e-27 96.0 0.0 2.4e-27 95.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF17449 - 5.8e-07 28.6 0.0 7.7e-07 28.2 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF17449 - 6.4e-06 26.3 0.0 1.4e-05 25.1 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF17449 - 8.8e-06 24.9 0.1 1e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF17449 - 0.00018 20.9 0.1 0.00025 20.5 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF17449 - 0.0015 17.9 0.0 0.0024 17.3 0.0 1.3 1 1 0 1 1 1 1 Kinase-like RIO1 PF01163.22 ORF17449 - 0.0054 16.3 0.0 0.016 14.8 0.1 1.7 1 1 1 2 2 2 1 RIO1 family Seadorna_VP7 PF07387.11 ORF17449 - 0.012 14.7 0.0 0.016 14.3 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 AP_endonuc_2 PF01261.24 ORF17327 - 4.6e-05 23.0 0.0 8.1e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel His_Phos_2 PF00328.22 ORF17089 - 0.00098 18.6 0.1 0.0012 18.3 0.1 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) MPC PF03650.13 ORF17089 - 0.06 13.5 0.0 0.079 13.1 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial pyruvate carriers Peptidase_M41 PF01434.18 ORF16679 - 9.5e-19 68.0 0.6 9.5e-19 68.0 0.6 1.5 2 0 0 2 2 2 1 Peptidase family M41 SPATIAL PF15256.6 ORF16679 - 0.14 12.4 0.3 0.14 12.4 0.3 2.0 1 1 1 2 2 2 0 SPATIAL VEGF_C PF14554.6 ORF161 - 0.033 14.3 1.4 0.033 14.3 1.4 2.0 2 0 0 2 2 2 0 VEGF heparin-binding domain GRP PF07172.11 ORF15895 - 1.5 9.6 33.6 2.6 8.8 33.6 1.5 1 0 0 1 1 1 0 Glycine rich protein family UT PF03253.14 ORF15784 - 7.7e-29 100.7 8.7 8.4e-29 100.6 8.7 1.0 1 0 0 1 1 1 1 Urea transporter CreA PF05981.12 ORF112537 - 5.2e-58 194.7 0.0 5.9e-58 194.5 0.0 1.0 1 0 0 1 1 1 1 CreA protein Ank_5 PF13857.6 ORF111028 - 0.0018 18.6 0.0 0.0033 17.7 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF111028 - 0.0023 18.5 0.0 0.61 10.7 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF111028 - 0.011 16.1 0.0 1.7 9.3 0.0 2.4 2 0 0 2 2 2 0 Ankyrin repeat Ank_4 PF13637.6 ORF111028 - 0.023 15.3 0.0 22 5.8 0.0 3.0 2 1 0 2 2 2 0 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF111028 - 0.15 12.7 0.0 29 5.7 0.0 2.5 2 0 0 2 2 2 0 Ankyrin repeat Baculo_p26 PF04766.12 ORF10980 - 0.014 14.8 0.1 0.02 14.4 0.1 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus p26 protein DUF4005 PF13178.6 ORF105964 - 0.75 10.5 5.5 0.39 11.4 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4005) TOM20_plant PF06552.12 ORF105323 - 0.024 14.4 1.3 0.032 14.0 1.3 1.2 1 0 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 PIG-P PF08510.12 ORF105174 - 0.081 12.8 0.1 0.091 12.7 0.1 1.1 1 0 0 1 1 1 0 PIG-P SBP_bac_5 PF00496.22 ORF104657 - 1.8e-16 60.1 0.1 2.5e-16 59.6 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Lactamase_B PF00753.27 ORF104167 - 1.7e-10 41.3 0.2 2.7e-10 40.6 0.2 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily MORN PF02493.20 ORF103454 - 0.0003 20.5 2.9 0.00035 20.3 0.1 2.6 3 0 0 3 3 3 1 MORN repeat DUF4816 PF16086.5 ORF103454 - 0.039 13.9 1.0 0.039 13.9 1.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4816) MFS_1 PF07690.16 ORF103204 - 2.2e-12 46.6 9.8 3e-12 46.2 9.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF103204 - 0.00032 19.4 5.3 0.00032 19.4 5.3 1.3 1 1 0 1 1 1 1 MFS/sugar transport protein ATG22 PF11700.8 ORF103204 - 0.097 11.3 8.2 0.22 10.1 1.6 2.2 1 1 0 2 2 2 0 Vacuole effluxer Atg22 like FUSC_2 PF13515.6 ORF103204 - 0.58 10.3 16.2 0.07 13.3 8.4 2.2 1 1 1 2 2 2 0 Fusaric acid resistance protein-like Pkinase PF00069.25 ORF101540 - 5.3e-30 104.7 0.2 6.4e-30 104.4 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101540 - 1e-17 64.3 0.1 1.2e-17 64.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF101540 - 1.1e-06 28.1 0.0 1.5e-06 27.7 0.0 1.3 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF101540 - 0.00047 19.0 0.0 0.00057 18.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF101540 - 0.00055 19.4 0.1 0.00072 19.0 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF101540 - 0.00098 19.1 0.0 0.0018 18.3 0.0 1.4 2 0 0 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF101540 - 0.0046 16.6 0.1 0.0086 15.7 0.1 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase Haspin_kinase PF12330.8 ORF101540 - 0.019 13.9 0.0 0.03 13.3 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 ORF101540 - 0.1 12.2 0.2 0.17 11.4 0.0 1.5 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 DNA_pol3_tau_5 PF12170.8 NODE_43216_length_466_cov_1.459397_g35551_i0forward_frame_1 - 0.0056 16.7 0.6 0.0075 16.3 0.6 1.2 1 0 0 1 1 1 1 DNA polymerase III tau subunit V interacting with alpha SPAN-X PF07458.12 NODE_43216_length_466_cov_1.459397_g35551_i0forward_frame_1 - 0.36 11.3 4.0 0.79 10.2 0.5 2.2 1 1 1 2 2 2 0 Sperm protein associated with nucleus, mapped to X chromosome Autotransporter PF03797.19 NODE_43205_length_466_cov_2.436195_g35540_i0forward_frame_1 - 0.001 18.8 0.2 0.0018 18.0 0.1 1.5 2 0 0 2 2 2 1 Autotransporter beta-domain HAD_2 PF13419.6 NODE_43184_length_466_cov_71.874710_g35519_i0reverse_frame_1 - 5.2e-08 33.2 0.0 6.4e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 NODE_43184_length_466_cov_71.874710_g35519_i0reverse_frame_1 - 3.7e-07 30.1 0.0 5.2e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 NODE_43184_length_466_cov_71.874710_g35519_i0reverse_frame_1 - 0.02 15.2 0.0 0.027 14.8 0.0 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Ribosomal_L37e PF01907.19 NODE_43184_length_466_cov_71.874710_g35519_i0forward_frame_1 - 0.0053 16.9 0.8 0.011 15.9 0.8 1.4 1 0 0 1 1 1 1 Ribosomal protein L37e ETS_PEA3_N PF04621.13 NODE_43184_length_466_cov_71.874710_g35519_i0forward_frame_1 - 0.063 13.2 1.8 0.069 13.0 1.8 1.1 1 0 0 1 1 1 0 PEA3 subfamily ETS-domain transcription factor N terminal domain Ion_trans PF00520.31 NODE_43183_length_466_cov_72.918794_g35518_i0forward_frame_1 - 5e-21 75.0 1.2 5.6e-21 74.9 1.2 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 NODE_43183_length_466_cov_72.918794_g35518_i0forward_frame_1 - 0.0045 15.7 7.0 0.0057 15.4 7.0 1.1 1 0 0 1 1 1 1 Polycystin cation channel DUF2976 PF11190.8 NODE_43183_length_466_cov_72.918794_g35518_i0forward_frame_1 - 0.0075 16.0 0.2 0.011 15.5 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2976) SMC_ScpB PF04079.16 NODE_43179_length_466_cov_84.784223_g35514_i0reverse_frame_1 - 0.02 14.5 0.1 0.038 13.6 0.1 1.4 1 1 0 1 1 1 0 Segregation and condensation complex subunit ScpB Gti1_Pac2 PF09729.9 NODE_43176_length_466_cov_93.508121_g35511_i0forward_frame_1 - 0.38 10.8 4.7 0.56 10.3 4.7 1.2 1 0 0 1 1 1 0 Gti1/Pac2 family TP53IP5 PF15331.6 NODE_43176_length_466_cov_93.508121_g35511_i0forward_frame_1 - 1.3 9.1 5.3 1.7 8.7 5.2 1.2 1 1 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 DNA_pol_phi PF04931.13 NODE_43176_length_466_cov_93.508121_g35511_i0forward_frame_1 - 5 5.1 12.0 6 4.8 12.0 1.0 1 0 0 1 1 1 0 DNA polymerase phi EF-hand_1 PF00036.32 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 1e-07 30.9 11.3 2.4e-05 23.5 0.8 3.2 3 1 1 4 4 4 2 EF hand EF-hand_7 PF13499.6 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 1.3e-06 28.7 9.3 1.3e-06 28.7 9.3 1.6 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 8.8e-05 22.1 11.3 0.038 13.9 1.1 3.4 2 2 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 0.00024 20.5 11.9 0.0017 17.8 0.5 3.3 2 1 1 3 3 3 2 EF hand EF-hand_4 PF12763.7 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 0.061 13.3 0.5 0.061 13.3 0.5 1.7 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 0.075 13.4 3.9 0.52 10.7 1.9 2.5 1 1 2 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 0.51 10.2 9.1 2.4 8.1 6.5 2.7 2 1 0 2 2 2 0 EF-hand domain pair 2TM PF13239.6 NODE_43162_length_466_cov_215.605568_g35497_i1reverse_frame_1 - 0.039 14.3 0.1 0.055 13.8 0.1 1.3 1 0 0 1 1 1 0 2TM domain 2TM PF13239.6 NODE_43161_length_466_cov_215.605568_g35497_i0reverse_frame_1 - 0.12 12.7 0.1 0.17 12.2 0.1 1.3 1 0 0 1 1 1 0 2TM domain DUF3287 PF11690.8 NODE_43148_length_466_cov_27600.617169_g35487_i0reverse_frame_1 - 0.13 12.0 1.9 5.1 6.8 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) DUF4491 PF14898.6 NODE_43146_length_467_cov_1.995370_g35485_i0forward_frame_1 - 0.042 14.3 2.3 0.062 13.7 2.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) SBP_bac_8 PF13416.6 NODE_43145_length_467_cov_2.016204_g35484_i0forward_frame_1 - 2.4e-14 53.8 0.2 2.9e-14 53.6 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 NODE_43145_length_467_cov_2.016204_g35484_i0forward_frame_1 - 5.6e-10 39.7 1.1 6.5e-10 39.4 1.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 NODE_43145_length_467_cov_2.016204_g35484_i0forward_frame_1 - 3.8e-07 29.8 0.1 6.3e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 NODE_43145_length_467_cov_2.016204_g35484_i0forward_frame_1 - 0.029 14.1 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein LINES_C PF14695.6 NODE_43143_length_467_cov_2.391204_g35482_i0reverse_frame_1 - 0.089 12.2 0.1 0.23 10.9 0.1 1.7 1 0 0 1 1 1 0 Lines C-terminus zf-C3HC4_4 PF15227.6 NODE_43140_length_467_cov_2.974537_g35479_i0reverse_frame_1 - 0.12 12.6 0.8 0.32 11.2 0.2 1.9 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING ILVD_EDD PF00920.21 NODE_43139_length_467_cov_3.071759_g35478_i0reverse_frame_1 - 3.3e-63 214.1 0.9 3.6e-63 214.0 0.9 1.0 1 0 0 1 1 1 1 Dehydratase family Ribosomal_S27 PF01599.19 NODE_43139_length_467_cov_3.071759_g35478_i0reverse_frame_1 - 0.008 16.3 3.1 3.7 7.8 0.5 3.1 3 0 0 3 3 3 2 Ribosomal protein S27a Lep_receptor_Ig PF06328.11 NODE_43138_length_467_cov_3.497685_g35477_i0reverse_frame_1 - 0.0023 17.8 0.8 0.0046 16.9 0.1 1.8 2 0 0 2 2 2 1 Ig-like C2-type domain NFACT-R_1 PF05670.13 NODE_43129_length_467_cov_64.780093_g35468_i0reverse_frame_1 - 1.4e-10 41.8 0.0 1.9e-10 41.3 0.0 1.1 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 NODE_43129_length_467_cov_64.780093_g35468_i0reverse_frame_1 - 2.4e-05 24.4 0.0 3.6e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 NFACT protein RNA binding domain OxoDH_E1alpha_N PF12573.8 NODE_43097_length_467_cov_293.127315_g35437_i0forward_frame_1 - 0.048 13.4 0.1 0.076 12.8 0.1 1.3 1 0 0 1 1 1 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal VKOR PF07884.14 NODE_43089_length_468_cov_1.563510_g35431_i0forward_frame_1 - 0.029 14.6 5.5 0.036 14.2 5.5 1.3 1 0 0 1 1 1 0 Vitamin K epoxide reductase family CHCH PF06747.13 NODE_43088_length_468_cov_2.226328_g35430_i0reverse_frame_1 - 0.026 14.7 0.8 0.044 13.9 0.8 1.3 1 0 0 1 1 1 0 CHCH domain DUF63 PF01889.17 NODE_43085_length_468_cov_2.284065_g35427_i0reverse_frame_1 - 0.032 14.4 1.1 0.042 14.0 1.1 1.1 1 0 0 1 1 1 0 Membrane protein of unknown function DUF63 Opy2 PF09463.10 NODE_43072_length_468_cov_3.491917_g35414_i0forward_frame_1 - 3.6 8.0 10.5 1.4 9.3 7.3 2.0 2 0 0 2 2 2 0 Opy2 protein YSIRK_signal PF04650.17 NODE_43070_length_468_cov_4.099307_g35412_i0reverse_frame_1 - 0.12 12.3 0.8 0.28 11.1 0.8 1.6 1 0 0 1 1 1 0 YSIRK type signal peptide DUF1940 PF09155.10 NODE_43069_length_468_cov_4.122402_g35411_i0forward_frame_1 - 0.027 14.6 0.1 0.075 13.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1940) TPR_7 PF13176.6 NODE_43069_length_468_cov_4.122402_g35411_i0forward_frame_1 - 0.039 14.0 0.0 0.083 13.0 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat PE-PPE PF08237.11 NODE_43069_length_468_cov_4.122402_g35411_i0forward_frame_1 - 0.087 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 PE-PPE domain Sporozoite_P67 PF05642.11 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_1 - 0.94 7.5 16.2 0.89 7.6 16.2 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen B277 PF17623.2 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_1 - 6 5.9 8.3 7.7 5.5 8.3 1.3 1 0 0 1 1 1 0 Domain of unknown function PRIMA1 PF16101.5 NODE_43064_length_468_cov_12.101617_g35406_i0forward_frame_1 - 0.87 9.6 3.9 1.2 9.2 3.9 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CaMBD PF02888.16 NODE_43062_length_468_cov_33.078522_g35404_i0reverse_frame_1 - 0.042 14.0 0.4 0.067 13.4 0.4 1.4 1 0 0 1 1 1 0 Calmodulin binding domain AAA_7 PF12775.7 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 4.6e-06 26.3 0.0 6.5e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_25 PF13481.6 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.0069 16.0 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.01 15.7 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.013 16.0 0.0 0.024 15.1 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.017 15.7 0.0 0.028 14.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.021 15.2 0.1 0.21 12.0 0.0 2.1 2 0 0 2 2 2 0 RNA helicase ATPase_2 PF01637.18 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.024 14.6 0.0 0.039 13.9 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.032 14.2 0.1 0.22 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.14 12.4 0.1 0.91 9.8 0.0 2.0 1 1 1 2 2 2 0 AAA domain Guanylate_kin PF00625.21 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.15 11.7 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Guanylate kinase MORN PF02493.20 NODE_43045_length_468_cov_97.782910_g35388_i0reverse_frame_1 - 1.4e-16 59.3 14.1 1.5e-05 24.6 0.6 5.4 5 0 0 5 5 5 4 MORN repeat TMEM247 PF15444.6 NODE_43033_length_468_cov_253.256351_g35376_i0reverse_frame_1 - 0.88 9.6 2.5 1.2 9.2 2.5 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 Chloroa_b-bind PF00504.21 NODE_43026_length_468_cov_4637.921478_g35373_i0reverse_frame_1 - 2e-22 80.5 0.0 2.8e-22 80.0 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein DUF2149 PF09919.9 NODE_43020_length_469_cov_1.716590_g35368_i0forward_frame_3 - 0.07 13.4 0.1 0.12 12.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) PIN_6 PF17146.4 NODE_43018_length_469_cov_2.276498_g31065_i1forward_frame_3 - 0.068 13.7 1.0 0.21 12.1 1.0 1.8 1 1 0 1 1 1 0 PIN domain of ribonuclease Imm3 PF14425.6 NODE_43018_length_469_cov_2.276498_g31065_i1forward_frame_3 - 0.19 11.8 1.9 0.26 11.3 1.9 1.2 1 0 0 1 1 1 0 Immunity protein Imm3 Cas9_PI2 PF18070.1 NODE_43018_length_469_cov_2.276498_g31065_i1forward_frame_2 - 0.014 16.2 0.3 0.048 14.4 0.3 1.9 1 0 0 1 1 1 0 CRISPR-Cas9 PI domain Presenilin PF01080.17 NODE_43018_length_469_cov_2.276498_g31065_i1forward_frame_2 - 0.2 10.4 0.2 0.22 10.3 0.2 1.1 1 0 0 1 1 1 0 Presenilin FerB PF08150.12 NODE_43010_length_469_cov_3.182028_g35359_i0reverse_frame_3 - 0.08 13.5 0.2 0.22 12.2 0.2 1.8 2 0 0 2 2 2 0 FerB (NUC096) domain Tetraspanin PF00335.20 NODE_43008_length_469_cov_3.327189_g35357_i0reverse_frame_3 - 4.1 7.0 7.4 1.5 8.5 4.2 1.7 1 1 1 2 2 2 0 Tetraspanin family Pkr1 PF08636.10 NODE_43008_length_469_cov_3.327189_g35357_i0reverse_frame_2 - 3.3 7.9 8.2 0.55 10.4 4.4 1.7 2 0 0 2 2 2 0 ER protein Pkr1 Vpu PF00558.19 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_3 - 0.026 14.3 0.1 0.042 13.6 0.1 1.3 1 0 0 1 1 1 0 Vpu protein TraL PF07178.11 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_3 - 0.045 14.2 0.1 0.081 13.4 0.1 1.4 1 0 0 1 1 1 0 TraL protein DUF4381 PF14316.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_3 - 0.18 12.1 1.4 0.25 11.6 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) SPP PF06550.11 NODE_43005_length_469_cov_4.271889_g35354_i0forward_frame_2 - 0.0095 15.4 0.4 0.015 14.8 0.4 1.2 1 0 0 1 1 1 1 Signal-peptide peptidase, presenilin aspartyl protease DUF5525 PF17663.1 NODE_43005_length_469_cov_4.271889_g35354_i0forward_frame_2 - 0.047 11.8 0.2 0.051 11.7 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) TMF_TATA_bd PF12325.8 NODE_43004_length_469_cov_4.967742_g35353_i0reverse_frame_3 - 0.012 15.9 3.7 0.016 15.4 3.7 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding WDCP PF15390.6 NODE_43004_length_469_cov_4.967742_g35353_i0reverse_frame_3 - 0.061 11.7 1.3 0.068 11.5 1.3 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family HIP1_clath_bdg PF16515.5 NODE_43004_length_469_cov_4.967742_g35353_i0reverse_frame_3 - 0.062 13.9 7.0 0.12 13.0 7.0 1.4 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Cob_adeno_trans PF01923.18 NODE_43004_length_469_cov_4.967742_g35353_i0reverse_frame_3 - 0.12 12.6 1.1 0.17 12.0 1.0 1.3 1 1 0 1 1 1 0 Cobalamin adenosyltransferase Fib_alpha PF08702.10 NODE_43004_length_469_cov_4.967742_g35353_i0reverse_frame_3 - 0.31 11.2 4.4 0.3 11.3 0.8 1.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Tyr-DNA_phospho PF06087.12 NODE_43004_length_469_cov_4.967742_g35353_i0forward_frame_2 - 0.24 10.2 0.0 0.26 10.1 0.0 1.0 1 0 0 1 1 1 0 Tyrosyl-DNA phosphodiesterase Zip PF02535.22 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_2 - 0.15 11.2 3.8 0.17 11.1 3.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DnaJ_CXXCXGXG PF00684.19 NODE_43002_length_469_cov_6.057604_g35351_i0forward_frame_3 - 0.017 15.5 11.5 0.058 13.8 1.0 2.2 1 1 1 2 2 2 0 DnaJ central domain FN3_7 PF18447.1 NODE_43000_length_469_cov_8.974654_g35349_i0reverse_frame_3 - 0.0051 17.1 0.6 0.0098 16.2 0.6 1.4 1 0 0 1 1 1 1 Fibronectin type III domain WD40 PF00400.32 NODE_43000_length_469_cov_8.974654_g35349_i0forward_frame_3 - 3.9e-07 30.6 0.6 0.057 14.3 0.1 2.9 2 2 0 2 2 2 2 WD domain, G-beta repeat DUF3727 PF12527.8 NODE_43000_length_469_cov_8.974654_g35349_i0forward_frame_3 - 0.053 13.7 1.0 0.29 11.4 0.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3727) DUF4634 PF15465.6 NODE_42998_length_469_cov_44.391705_g35347_i0reverse_frame_2 - 0.11 12.7 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4634) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks140.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks140.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks140.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks140.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_1 PF07690.16 NODE_42993_length_469_cov_64.894009_g35342_i0reverse_frame_3 - 6.1e-06 25.4 0.3 7.6e-06 25.1 0.3 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_42993_length_469_cov_64.894009_g35342_i0reverse_frame_3 - 0.014 14.2 6.2 0.019 13.8 6.2 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter DUF3278 PF11683.8 NODE_42993_length_469_cov_64.894009_g35342_i0reverse_frame_3 - 0.042 13.9 3.0 0.13 12.3 1.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3278) DUF570 PF04489.13 NODE_42993_length_469_cov_64.894009_g35342_i0forward_frame_3 - 0.034 12.8 2.2 0.042 12.5 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF570) WD40_like PF17005.5 NODE_42992_length_469_cov_72.958525_g35341_i0forward_frame_3 - 0.037 13.4 0.1 0.045 13.1 0.1 1.2 1 0 0 1 1 1 0 WD40-like domain Xol-1_GHMP-like PF09109.10 NODE_42990_length_469_cov_81.460829_g35339_i0forward_frame_2 - 0.58 10.0 5.1 0.37 10.6 1.9 1.9 1 1 1 2 2 2 0 Switch protein XOL-1, GHMP-like Ribosomal_S6e PF01092.19 NODE_42986_length_469_cov_90.112903_g35335_i0reverse_frame_3 - 0.086 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S6e His_Me_b4a2 PF18275.1 NODE_42986_length_469_cov_90.112903_g35335_i0reverse_frame_3 - 0.18 11.9 1.6 1.1 9.4 0.9 2.4 2 1 1 3 3 3 0 His-Me finger endonuclease beta4-alpha2 domain NHL PF01436.21 NODE_42983_length_469_cov_102.207373_g35332_i0forward_frame_3 - 0.0065 16.4 0.0 0.11 12.5 0.0 2.6 3 0 0 3 3 3 1 NHL repeat Herpes_capsid PF06112.11 NODE_42979_length_469_cov_113.124424_g35328_i0forward_frame_3 - 1.5 8.9 8.2 0.6 10.2 6.0 1.4 1 1 0 1 1 1 0 Gammaherpesvirus capsid protein Tctex-1 PF03645.13 NODE_42976_length_469_cov_149.470046_g35325_i0reverse_frame_2 - 5.3e-24 84.4 0.5 6.7e-24 84.1 0.5 1.1 1 0 0 1 1 1 1 Tctex-1 family Hepatitis_core PF00906.20 NODE_42976_length_469_cov_149.470046_g35325_i0forward_frame_3 - 0.63 9.6 4.0 0.82 9.2 4.0 1.2 1 0 0 1 1 1 0 Hepatitis core antigen PP-binding PF00550.25 NODE_42966_length_469_cov_242.440092_g35315_i0forward_frame_2 - 2.7e-07 30.8 0.1 4.1e-07 30.3 0.1 1.4 1 0 0 1 1 1 1 Phosphopantetheine attachment site PP-binding_2 PF14573.6 NODE_42966_length_469_cov_242.440092_g35315_i0forward_frame_2 - 0.13 12.6 1.9 0.23 11.7 0.2 1.9 1 1 1 2 2 2 0 Acyl-carrier SWIRM-assoc_2 PF16496.5 NODE_42964_length_469_cov_963.200461_g35313_i0reverse_frame_2 - 0.84 8.4 5.1 0.9 8.3 5.1 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal DUF2716 PF10898.8 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_2 - 0.15 12.4 0.1 0.2 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2716) Autotransporter PF03797.19 NODE_42948_length_470_cov_2.425287_g35302_i0reverse_frame_3 - 3.4e-12 46.5 3.8 4.2e-12 46.3 3.8 1.1 1 0 0 1 1 1 1 Autotransporter beta-domain NDK PF00334.19 NODE_42944_length_470_cov_2.845977_g35298_i0forward_frame_3 - 2.3e-22 79.4 0.0 3.1e-22 79.0 0.0 1.2 1 0 0 1 1 1 1 Nucleoside diphosphate kinase F_bP_aldolase PF01116.20 NODE_42943_length_470_cov_2.889655_g35297_i0forward_frame_2 - 5.9e-22 78.5 0.1 7.2e-22 78.2 0.1 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II NCOA_u2 PF16665.5 NODE_42941_length_470_cov_2.949425_g35295_i0reverse_frame_3 - 1.8 8.9 6.9 0.76 10.1 4.3 1.7 1 1 1 2 2 2 0 Unstructured region on nuclear receptor coactivator protein ProQ PF04352.13 NODE_42941_length_470_cov_2.949425_g35295_i0forward_frame_2 - 1.8e-42 143.7 0.5 2.6e-42 143.2 0.0 1.4 1 1 1 2 2 2 1 ProQ/FINO family PARP_reg PF02877.14 NODE_42941_length_470_cov_2.949425_g35295_i0forward_frame_2 - 0.063 13.4 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase, regulatory domain DUF4407 PF14362.6 NODE_42941_length_470_cov_2.949425_g35295_i0forward_frame_2 - 1.2 8.5 4.8 2.4 7.5 4.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3043 PF11241.8 NODE_42941_length_470_cov_2.949425_g35295_i0forward_frame_2 - 4 7.4 8.3 5.8 6.9 8.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) TMF_DNA_bd PF12329.8 NODE_42938_length_470_cov_3.747126_g35292_i0forward_frame_3 - 0.075 13.0 9.7 0.16 12.0 9.7 1.6 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding MFS_1 PF07690.16 NODE_42936_length_470_cov_3.942529_g35290_i0reverse_frame_3 - 0.00019 20.5 16.1 0.00098 18.1 16.5 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily Tetraspanin PF00335.20 NODE_42936_length_470_cov_3.942529_g35290_i0reverse_frame_3 - 4.7 6.9 8.4 6 6.5 8.4 1.3 1 0 0 1 1 1 0 Tetraspanin family Josephin PF02099.17 NODE_42935_length_470_cov_4.052874_g35289_i0reverse_frame_3 - 0.084 13.0 4.8 0.048 13.8 3.1 1.4 1 1 0 1 1 1 0 Josephin Oxidored-like PF09791.9 NODE_42935_length_470_cov_4.052874_g35289_i0forward_frame_2 - 1.5 8.6 5.5 2.4 7.9 5.5 1.2 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal ESM4 PF15952.5 NODE_42925_length_470_cov_69.850575_g35279_i0reverse_frame_3 - 0.046 14.1 5.8 0.056 13.9 5.8 1.2 1 0 0 1 1 1 0 Enhancer of split M4 family DUF805 PF05656.14 NODE_42921_length_470_cov_78.282759_g35275_i0reverse_frame_2 - 9.7 6.7 10.4 2.6 8.5 3.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF805) EMC3_TMCO1 PF01956.16 NODE_42921_length_470_cov_78.282759_g35275_i0forward_frame_2 - 0.086 12.6 0.2 0.086 12.6 0.2 1.6 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Cytadhesin_P30 PF07271.11 NODE_42921_length_470_cov_78.282759_g35275_i0forward_frame_2 - 0.57 9.7 2.5 0.85 9.1 2.5 1.2 1 0 0 1 1 1 0 Cytadhesin P30/P32 MORN PF02493.20 NODE_42912_length_470_cov_103.921839_g35266_i0forward_frame_2 - 0.05 13.5 8.6 0.22 11.5 0.0 3.7 4 0 0 4 4 4 0 MORN repeat SPAN-X PF07458.12 NODE_42910_length_470_cov_111.321839_g35265_i0reverse_frame_2 - 0.042 14.3 3.8 0.042 14.3 3.8 2.2 2 0 0 2 2 2 0 Sperm protein associated with nucleus, mapped to X chromosome DUF1077 PF06417.12 NODE_42910_length_470_cov_111.321839_g35265_i0forward_frame_3 - 0.3 11.1 3.5 0.15 12.1 1.0 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1077) DUF3212 PF11486.8 NODE_42908_length_470_cov_128.397701_g35263_i0reverse_frame_3 - 0.081 12.9 0.4 0.17 11.9 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3212) Pyridox_ox_2 PF12900.7 NODE_42899_length_470_cov_200.105747_g35254_i0reverse_frame_3 - 0.13 12.3 0.1 0.2 11.6 0.1 1.3 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase MTP18 PF10558.9 NODE_42894_length_470_cov_584.685057_g35250_i0reverse_frame_3 - 0.031 14.2 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial 18 KDa protein (MTP18) zf-LITAF-like PF10601.9 NODE_42894_length_470_cov_584.685057_g35250_i0forward_frame_3 - 5.6e-13 49.0 10.2 8e-13 48.5 10.2 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain PXPV PF12778.7 NODE_42894_length_470_cov_584.685057_g35250_i0forward_frame_3 - 1.4 8.9 15.5 0.42 10.5 11.3 2.3 1 1 1 2 2 2 0 PXPV repeat (3 copies) TMEM190 PF15431.6 NODE_42894_length_470_cov_584.685057_g35250_i0forward_frame_2 - 0.028 14.6 4.8 0.04 14.1 4.8 1.2 1 0 0 1 1 1 0 Transmembrane protein 190 UQ_con PF00179.26 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_3 - 6.6e-52 174.9 0.0 7.7e-52 174.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_3 - 0.00046 20.5 0.1 0.00064 20.0 0.0 1.4 2 0 0 2 2 2 1 RWD domain Prok-E2_B PF14461.6 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_3 - 0.0032 17.2 0.0 0.004 16.9 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_3 - 0.027 14.3 0.1 0.057 13.3 0.0 1.5 2 0 0 2 2 2 0 UEV domain Ly49 PF08391.10 NODE_42884_length_471_cov_2.229358_g35243_i0reverse_frame_2 - 4.3 7.7 6.1 0.7 10.3 2.0 1.9 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region VMA21 PF09446.10 NODE_42884_length_471_cov_2.229358_g35243_i0forward_frame_3 - 5.4 7.2 14.9 0.54 10.4 7.3 2.6 1 1 1 2 2 2 0 VMA21-like domain HTH_42 PF06224.12 NODE_42884_length_471_cov_2.229358_g35243_i0forward_frame_2 - 0.31 10.5 0.0 0.41 10.1 0.0 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain DCR PF14047.6 NODE_42883_length_471_cov_2.353211_g35242_i0forward_frame_3 - 0.014 15.6 0.1 0.033 14.4 0.0 1.5 1 1 0 1 1 1 0 Dppa2/4 conserved region Response_reg PF00072.24 NODE_42880_length_471_cov_3.002294_g35239_i0forward_frame_2 - 2.2e-17 63.2 0.5 3.8e-17 62.4 0.5 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Polo_box_2 PF18531.1 NODE_42880_length_471_cov_3.002294_g35239_i0forward_frame_2 - 0.13 12.4 0.1 0.2 11.8 0.1 1.3 1 0 0 1 1 1 0 Polo box domain CRAL_TRIO PF00650.20 NODE_42879_length_471_cov_3.032110_g35238_i0forward_frame_3 - 0.032 13.9 0.2 0.32 10.7 0.1 2.1 2 0 0 2 2 2 0 CRAL/TRIO domain AAA_31 PF13614.6 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 2.1e-08 34.3 0.1 3.5e-08 33.6 0.1 1.3 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 3.4e-07 30.4 0.1 6.2e-07 29.5 0.1 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 8.9e-05 22.1 0.2 0.00014 21.5 0.2 1.3 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SRP54 PF00448.22 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.00033 20.4 0.1 0.00047 19.8 0.1 1.4 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain CBP_BcsQ PF06564.12 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.0043 16.6 0.0 0.0061 16.1 0.0 1.2 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ DnaB_C PF03796.15 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.0052 16.1 0.1 0.0062 15.9 0.1 1.2 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_26 PF13500.6 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.01 15.7 0.1 0.018 14.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.016 14.7 0.1 0.022 14.2 0.1 1.3 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.041 13.1 0.1 0.11 11.7 0.1 1.7 1 1 1 2 2 2 0 Anion-transporting ATPase DAHP_synth_1 PF00793.20 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.08 11.8 0.2 0.24 10.2 0.1 1.7 1 1 1 2 2 2 0 DAHP synthetase I family Nucleos_tra2_N PF01773.20 NODE_42876_length_471_cov_4.105505_g35235_i0forward_frame_2 - 3.6e-22 78.7 3.0 3.6e-22 78.7 3.0 2.2 2 1 1 3 3 3 1 Na+ dependent nucleoside transporter N-terminus Gate PF07670.14 NODE_42876_length_471_cov_4.105505_g35235_i0forward_frame_2 - 0.00026 21.2 2.9 0.00026 21.2 2.9 2.0 2 1 0 2 2 2 1 Nucleoside recognition DUF4750 PF15938.5 NODE_42876_length_471_cov_4.105505_g35235_i0forward_frame_2 - 5.7 6.7 9.2 0.36 10.5 2.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) Mito_carr PF00153.27 NODE_42869_length_471_cov_51.075688_g35228_i0reverse_frame_3 - 7e-09 35.5 0.0 1e-08 35.0 0.0 1.3 1 0 0 1 1 1 1 Mitochondrial carrier protein SPRY PF00622.28 NODE_42867_length_471_cov_57.197248_g35226_i0reverse_frame_3 - 1.1e-08 35.2 0.4 1.5e-08 34.8 0.4 1.2 1 0 0 1 1 1 1 SPRY domain His_Phos_1 PF00300.22 NODE_42864_length_471_cov_70.004587_g35224_i0forward_frame_3 - 0.00073 19.3 0.0 0.0011 18.8 0.0 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) T2SSF PF00482.23 NODE_42864_length_471_cov_70.004587_g35224_i0forward_frame_3 - 0.16 12.0 0.0 4 7.4 0.0 2.1 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein F Peptidase_C92 PF05708.12 NODE_42856_length_471_cov_100.481651_g35216_i0forward_frame_3 - 7.7e-06 26.1 0.0 1.1e-05 25.7 0.0 1.4 1 1 0 1 1 1 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HEAT_PBS PF03130.16 NODE_42856_length_471_cov_100.481651_g35216_i0forward_frame_3 - 0.04 14.6 0.1 0.09 13.5 0.1 1.5 1 0 0 1 1 1 0 PBS lyase HEAT-like repeat tRNA-synt_1g PF09334.11 NODE_42855_length_471_cov_114.130734_g35215_i0forward_frame_3 - 0.013 14.3 0.1 0.017 13.9 0.1 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (M) Bac_surface_Ag PF01103.23 NODE_42854_length_471_cov_114.635321_g35214_i0reverse_frame_2 - 0.068 12.7 0.1 0.085 12.3 0.1 1.1 1 0 0 1 1 1 0 Surface antigen Put_DNA-bind_N PF06971.13 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_2 - 0.17 11.9 1.0 0.38 10.8 0.1 2.0 2 1 1 3 3 3 0 Putative DNA-binding protein N-terminus Sec62 PF03839.16 NODE_42851_length_471_cov_121.543578_g35211_i0forward_frame_3 - 0.0077 15.8 1.6 0.012 15.2 1.6 1.2 1 0 0 1 1 1 1 Translocation protein Sec62 IL7 PF01415.16 NODE_42844_length_471_cov_169.114679_g35204_i0reverse_frame_3 - 0.033 14.2 0.6 0.052 13.6 0.6 1.2 1 0 0 1 1 1 0 Interleukin 7/9 family AmoC PF04896.12 NODE_42844_length_471_cov_169.114679_g35204_i0forward_frame_2 - 0.11 11.7 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C Abhydro_lipase PF04083.16 NODE_42841_length_471_cov_185.096330_g35201_i0reverse_frame_2 - 0.081 12.5 0.5 0.3 10.7 0.0 2.0 2 0 0 2 2 2 0 Partial alpha/beta-hydrolase lipase region DUF3363 PF11843.8 NODE_42837_length_471_cov_270.832569_g35198_i0reverse_frame_2 - 0.0081 15.1 2.0 0.0094 14.9 2.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3363) SOCS_box PF07525.16 NODE_42837_length_471_cov_270.832569_g35198_i0forward_frame_3 - 8.1 6.9 9.1 35 4.9 0.4 3.3 1 1 1 2 2 2 0 SOCS box Herpes_U59 PF04529.12 NODE_42833_length_471_cov_629.543578_g35194_i0reverse_frame_3 - 0.032 13.3 0.2 0.039 13.0 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein DUF979 PF06166.12 NODE_42831_length_471_cov_833.002294_g35192_i0reverse_frame_3 - 0.0025 17.0 0.1 0.0028 16.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF979) Herpes_U59 PF04529.12 NODE_42831_length_471_cov_833.002294_g35192_i0forward_frame_3 - 0.033 13.2 0.2 0.041 13.0 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein EnY2 PF10163.9 NODE_42829_length_471_cov_2036.282110_g35190_i0reverse_frame_2 - 9.7e-29 99.6 1.4 1.3e-28 99.2 1.4 1.2 1 0 0 1 1 1 1 Transcription factor e(y)2 RPA_interact_N PF14766.6 NODE_42829_length_471_cov_2036.282110_g35190_i0reverse_frame_2 - 0.14 11.8 1.1 0.31 10.7 1.1 1.6 1 0 0 1 1 1 0 Replication protein A interacting N-terminal DXP_redisom_C PF08436.12 NODE_42824_length_471_cov_27284.488532_g35186_i0forward_frame_2 - 0.12 12.5 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain UBA PF00627.31 ORF9846 - 0.0014 18.4 0.2 0.0032 17.3 0.2 1.6 1 0 0 1 1 1 1 UBA/TS-N domain FTR1 PF03239.14 ORF9846 - 0.014 14.5 0.1 0.018 14.2 0.1 1.1 1 0 0 1 1 1 0 Iron permease FTR1 family UBA_4 PF14555.6 ORF9846 - 0.022 14.6 1.2 0.056 13.3 0.4 2.0 1 1 1 2 2 2 0 UBA-like domain DUF4483 PF14825.6 ORF97868 - 3.1e-14 53.0 0.1 3.1e-14 53.0 0.1 1.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4483) MIG-14_Wnt-bd PF06664.12 ORF9613 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF9613 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF9613 - 0.003 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF9613 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF9613 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF9613 - 0.0089 16.2 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF9613 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF9613 - 0.069 12.8 0.0 0.079 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF9613 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF9613 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF9613 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF9613 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF9613 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) adh_short PF00106.25 ORF95052 - 6.9e-14 51.8 0.0 8.5e-14 51.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF95052 - 2.2e-07 30.7 0.0 2.6e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Proteasome PF00227.26 ORF9439 - 1.6e-29 102.8 0.2 2e-29 102.4 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF9439 - 3.3e-05 23.5 0.0 5.9e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature MORN PF02493.20 ORF94080 - 4.7e-10 38.8 17.8 0.00026 20.7 1.6 4.0 4 0 0 4 4 4 3 MORN repeat CDC45 PF02724.14 ORF94080 - 0.02 13.2 13.2 0.021 13.1 13.2 1.0 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 ORF94080 - 0.77 7.9 20.9 0.82 7.8 20.9 1.0 1 0 0 1 1 1 0 Nop14-like family Cwf_Cwc_15 PF04889.12 ORF94080 - 1.5 8.5 19.4 1.9 8.2 19.4 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein TSC22 PF01166.18 ORF93141 - 7.7e-05 22.9 1.7 0.00022 21.4 1.7 1.8 1 0 0 1 1 1 1 TSC-22/dip/bun family KASH_CCD PF14662.6 ORF93141 - 0.00033 20.5 12.6 0.00043 20.2 12.6 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Shugoshin_N PF07558.11 ORF93141 - 0.00045 20.0 1.4 0.0011 18.8 1.4 1.8 1 0 0 1 1 1 1 Shugoshin N-terminal coiled-coil region YabA PF06156.13 ORF93141 - 0.0013 19.3 5.2 0.0013 19.3 5.2 2.0 1 1 1 2 2 2 1 Initiation control protein YabA DUF4094 PF13334.6 ORF93141 - 0.24 11.8 2.9 0.4 11.1 0.1 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4094) DivIC PF04977.15 ORF93141 - 1.7 8.4 11.6 0.18 11.6 4.2 2.8 2 2 1 3 3 3 0 Septum formation initiator PL48 PF15903.5 ORF88784 - 0.099 11.6 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Filopodia upregulated, FAM65 RBD-FIP PF09457.10 ORF88784 - 0.17 11.8 0.9 0.85 9.6 0.0 2.5 3 1 0 3 3 3 0 FIP domain Arg_repressor PF01316.21 ORF8865 - 4.8e-26 90.3 0.1 7.1e-26 89.8 0.1 1.3 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain Arg_repressor_C PF02863.18 ORF8865 - 6e-23 80.5 0.2 1.1e-22 79.6 0.2 1.5 1 0 0 1 1 1 1 Arginine repressor, C-terminal domain DUF4911 PF16256.5 ORF8865 - 0.092 12.7 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4911) AAA_22 PF13401.6 ORF8865 - 0.12 12.7 0.0 0.35 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain Neurensin PF14927.6 ORF88574 - 0.3 10.8 4.0 0.43 10.3 0.3 2.2 1 1 1 2 2 2 0 Neurensin TraP PF07296.11 ORF88390 - 0.0098 15.1 0.0 0.013 14.7 0.0 1.1 1 0 0 1 1 1 1 TraP protein NapB PF03892.14 ORF87964 - 1.3e-42 144.8 0.1 1.6e-42 144.6 0.1 1.1 1 0 0 1 1 1 1 Nitrate reductase cytochrome c-type subunit (NapB) DUF3365 PF11845.8 ORF87964 - 0.011 16.0 0.8 1.4 9.3 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3365) Paired_CXXCH_1 PF09699.10 ORF87964 - 0.024 14.4 2.5 0.22 11.3 2.5 2.2 1 1 1 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_C7 PF14522.6 ORF87964 - 0.034 14.1 0.4 0.086 12.8 0.4 1.5 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c Cytochrome_CBB3 PF13442.6 ORF87964 - 0.044 14.1 0.8 10 6.5 0.0 2.4 1 1 1 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_NNT PF03264.14 ORF87964 - 0.045 13.4 0.7 0.1 12.3 0.7 1.6 1 1 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region Cytochrom_C PF00034.21 ORF87964 - 0.064 14.4 0.8 1.3 10.2 0.8 2.4 1 1 0 1 1 1 0 Cytochrome c Cytochrome_C554 PF13435.6 ORF87964 - 0.072 14.0 1.0 16 6.5 0.1 2.3 1 1 1 2 2 2 0 Cytochrome c554 and c-prime Cytochrom_c3_2 PF14537.6 ORF87964 - 0.097 13.1 0.7 0.91 10.0 1.0 2.1 1 1 0 1 1 1 0 Cytochrome c3 PSCyt1 PF07635.11 ORF87964 - 0.19 12.4 1.0 20 5.8 0.0 3.0 3 0 0 3 3 3 0 Planctomycete cytochrome C tRNA-synt_2 PF00152.20 ORF8738 - 1.5e-28 99.8 0.0 1.7e-28 99.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF8738 - 0.16 11.4 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) MAPEG PF01124.18 ORF87264 - 7.8e-14 51.7 1.0 1.3e-13 51.0 1.0 1.3 1 1 0 1 1 1 1 MAPEG family RIO1 PF01163.22 ORF85863 - 0.048 13.3 0.0 0.06 13.0 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Pkinase PF00069.25 ORF85863 - 0.12 11.7 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain Pkinase PF00069.25 ORF84936 - 1.7e-42 145.6 0.6 2e-42 145.4 0.6 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF84936 - 4e-22 78.7 0.0 4.9e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF84936 - 0.0024 17.2 0.0 0.0035 16.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF84936 - 0.066 13.1 0.1 0.12 12.3 0.1 1.4 1 1 1 2 2 2 0 Phosphotransferase enzyme family PAN_1 PF00024.26 ORF84656 - 1.8e-12 47.0 13.0 5.5e-07 29.5 1.4 2.1 2 0 0 2 2 2 2 PAN domain PAN_4 PF14295.6 ORF84656 - 2.8e-10 39.9 12.2 1.3e-05 25.0 1.6 2.6 2 1 0 2 2 2 2 PAN domain Phage_int_SAM_2 PF12834.7 ORF84353 - 0.03 15.0 0.0 0.056 14.1 0.0 1.4 1 0 0 1 1 1 0 Phage integrase, N-terminal RNase_II_C_S1 PF18614.1 ORF83975 - 0.19 11.7 0.0 0.3 11.1 0.0 1.3 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain Exosortase_EpsH PF09721.10 ORF83532 - 0.17 11.4 4.2 0.28 10.7 4.2 1.4 1 1 0 1 1 1 0 Transmembrane exosortase (Exosortase_EpsH) Dehydrin PF00257.19 ORF82612 - 0.0019 18.8 20.3 0.0024 18.5 20.3 1.1 1 0 0 1 1 1 1 Dehydrin zf-CCHC PF00098.23 ORF82612 - 0.002 18.1 3.2 0.0036 17.3 3.2 1.4 1 0 0 1 1 1 1 Zinc knuckle SR-25 PF10500.9 ORF82612 - 0.0058 16.3 33.1 0.0076 15.9 33.1 1.2 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein zf-CCHC_4 PF14392.6 ORF82612 - 0.055 13.2 0.5 0.12 12.2 0.5 1.4 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_2 PF13696.6 ORF82612 - 0.12 12.3 0.5 0.18 11.6 0.5 1.3 1 0 0 1 1 1 0 Zinc knuckle DDHD PF02862.17 ORF82612 - 0.16 12.1 3.9 0.16 12.1 3.9 1.1 1 0 0 1 1 1 0 DDHD domain EOS1 PF12326.8 ORF82612 - 0.4 10.6 2.3 0.39 10.6 2.3 1.1 1 0 0 1 1 1 0 N-glycosylation protein Presenilin PF01080.17 ORF82612 - 0.41 9.4 6.1 0.32 9.7 6.1 1.1 1 0 0 1 1 1 0 Presenilin CCDC106 PF15794.5 ORF82612 - 0.65 9.7 18.4 0.8 9.4 18.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RNA_polI_A34 PF08208.11 ORF82612 - 0.77 9.8 31.1 1.2 9.2 31.1 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Med19 PF10278.9 ORF82612 - 0.87 9.5 29.7 1.2 9.1 29.7 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 RR_TM4-6 PF06459.12 ORF82612 - 0.99 9.2 14.0 1.2 8.9 14.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 SRP-alpha_N PF04086.13 ORF82612 - 0.99 9.3 21.3 1.1 9.1 21.3 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Vfa1 PF08432.10 ORF82612 - 2.9 8.2 22.8 4 7.7 22.8 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 CDC45 PF02724.14 ORF82612 - 4.2 5.6 13.1 4.4 5.5 13.1 1.1 1 0 0 1 1 1 0 CDC45-like protein Carboxyl_trans PF01039.22 ORF81997 - 0.042 12.5 0.4 0.057 12.0 0.2 1.3 1 1 0 1 1 1 0 Carboxyl transferase domain DUF717 PF05338.12 ORF81997 - 0.11 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF717) IAT_beta PF11924.8 ORF81997 - 0.13 11.7 0.1 0.17 11.2 0.1 1.1 1 0 0 1 1 1 0 Inverse autotransporter, beta-domain DUF5635 PF18685.1 ORF81867 - 0.065 13.2 0.1 0.38 10.7 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5635) MFS_1 PF07690.16 ORF8074 - 3.9e-14 52.4 12.9 4.3e-14 52.2 12.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MadM PF03818.13 ORF8074 - 0.026 14.4 0.5 0.026 14.4 0.5 2.1 2 0 0 2 2 2 0 Malonate/sodium symporter MadM subunit PsbJ PF01788.17 ORF8074 - 3.2 7.7 11.4 0.29 11.0 0.6 3.0 4 0 0 4 4 4 0 PsbJ Toxin_8 PF07365.12 ORF79540 - 0.41 10.9 0.1 0.41 10.9 0.1 2.2 2 1 0 2 2 2 0 Alpha conotoxin precursor DUF1488 PF07369.11 ORF79540 - 1.1 9.3 6.4 5 7.2 0.3 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1488) LIM_bind PF01803.16 ORF79475 - 0.026 14.1 0.4 0.037 13.6 0.3 1.3 1 1 0 1 1 1 0 LIM-domain binding protein DUF2201_N PF13203.6 ORF79475 - 0.081 12.5 1.4 0.089 12.4 1.4 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain DUF3275 PF11679.8 ORF79475 - 0.19 11.7 1.9 0.3 11.0 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) DUF2608 PF11019.8 ORF77435 - 0.12 11.9 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2608) MIG-14_Wnt-bd PF06664.12 ORF77411 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF77411 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF77411 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF77411 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF77411 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF77411 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF77411 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF77411 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF77411 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF77411 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF77411 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF77411 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF77411 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Chloroa_b-bind PF00504.21 ORF76756 - 1.3e-26 94.1 0.0 1.5e-26 93.9 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein MIG-14_Wnt-bd PF06664.12 ORF76198 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF76198 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF76198 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF76198 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF76198 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF76198 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF76198 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF76198 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF76198 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF76198 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF76198 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF76198 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF76198 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4320 PF14208.6 ORF75974 - 0.38 10.8 1.7 1.8 8.7 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4320) NIF PF03031.18 ORF75513 - 0.00016 21.5 0.0 0.00031 20.6 0.0 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF4483 PF14825.6 ORF74041 - 3.1e-14 53.0 0.1 3.1e-14 53.0 0.1 1.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4483) SH3BGR PF04908.15 ORF73727 - 0.022 14.9 3.9 0.022 14.9 3.9 1.8 2 0 0 2 2 2 0 SH3-binding, glutamic acid-rich protein FRB_dom PF08771.11 ORF73727 - 0.06 13.8 4.0 0.27 11.7 0.1 2.2 2 0 0 2 2 2 0 FKBP12-rapamycin binding domain Glypican PF01153.19 ORF73727 - 0.65 8.8 9.0 0.79 8.5 9.0 1.0 1 0 0 1 1 1 0 Glypican IRF PF00605.17 ORF73727 - 0.8 10.0 5.1 0.7 10.2 0.5 2.3 2 0 0 2 2 2 0 Interferon regulatory factor transcription factor EF-hand_14 PF17959.1 ORF73727 - 1 9.8 8.5 5.1 7.5 2.7 2.7 2 1 0 2 2 2 0 EF-hand domain TPR_2 PF07719.17 ORF73727 - 1.3 9.3 4.2 57 4.2 0.7 3.2 2 1 1 3 3 3 0 Tetratricopeptide repeat YabA PF06156.13 ORF73727 - 2.8 8.6 15.1 6.8 7.4 5.1 2.2 2 0 0 2 2 2 0 Initiation control protein YabA DUF4407 PF14362.6 ORF73727 - 5.7 6.2 12.7 6.6 6.0 12.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Uds1 PF15456.6 ORF73727 - 6.3 7.0 12.4 11 6.2 12.4 1.4 1 1 0 1 1 1 0 Up-regulated During Septation adh_short PF00106.25 ORF73260 - 6.9e-14 51.8 0.0 8.5e-14 51.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF73260 - 2.2e-07 30.7 0.0 2.6e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase HU-CCDC81_euk_1 PF14908.6 ORF7185 - 3.5e-23 81.6 0.0 4.7e-23 81.2 0.0 1.2 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 Bac_DNA_binding PF00216.21 ORF7185 - 0.0022 18.2 0.2 0.0045 17.2 0.0 1.8 2 1 0 2 2 2 1 Bacterial DNA-binding protein HU-HIG PF18291.1 ORF7185 - 0.046 13.8 0.1 0.15 12.2 0.0 1.9 2 0 0 2 2 2 0 HU domain fused to wHTH, Ig, or Glycine-rich motif DUF5639 PF18690.1 ORF7185 - 0.2 11.9 0.0 0.32 11.2 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5639) Acetyltransf_1 PF00583.25 ORF70929 - 1.9e-13 50.6 0.1 2.8e-13 50.1 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF70929 - 3.3e-10 40.0 0.0 4.7e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF70929 - 5.1e-09 36.0 0.0 7.8e-09 35.4 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 ORF70929 - 1.4e-08 35.0 0.0 2.1e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF70929 - 0.0014 18.8 0.0 0.002 18.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF70929 - 0.0018 19.0 0.0 0.0027 18.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF70929 - 0.016 15.3 0.0 0.022 14.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF70929 - 0.2 11.8 0.0 0.37 11.0 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DUF1648 PF07853.11 ORF70330 - 0.095 12.4 1.6 1.1 9.0 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1648) Cyt-b5 PF00173.28 ORF69065 - 3.1e-14 52.9 0.0 6.4e-14 51.9 0.0 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain PadR PF03551.14 ORF69065 - 0.12 12.4 0.0 0.32 11.0 0.0 1.8 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family NdhS PF11623.8 ORF69065 - 0.14 11.8 0.0 0.63 9.8 0.0 2.0 2 0 0 2 2 2 0 NAD(P)H dehydrogenase subunit S DUF4585 PF15232.6 ORF69051 - 0.019 15.0 0.3 0.054 13.5 0.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4585) MFS_2 PF13347.6 ORF68350 - 6.9e-14 51.2 4.1 7.9e-14 51.0 4.1 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein GerE PF00196.19 ORF68142 - 5.1e-24 83.6 0.2 8.9e-24 82.8 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Response_reg PF00072.24 ORF68142 - 1.9e-15 57.0 0.0 3.9e-15 56.0 0.0 1.5 2 0 0 2 2 2 1 Response regulator receiver domain Sigma70_r4_2 PF08281.12 ORF68142 - 0.0018 17.9 0.0 0.0031 17.2 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 ORF68142 - 0.0025 17.4 0.1 0.0055 16.2 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 ORF68142 - 0.0029 17.1 0.2 0.011 15.3 0.0 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.6 ORF68142 - 0.13 12.1 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_38 PF13936.6 ORF68142 - 0.13 12.0 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_ECF PF07638.11 ORF68142 - 0.14 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 ECF sigma factor TMEM154 PF15102.6 ORF68118 - 0.093 12.6 2.4 7 6.5 0.2 2.1 2 0 0 2 2 2 0 TMEM154 protein family Ribosomal_L30_N PF08079.12 ORF68118 - 0.15 12.4 0.0 0.37 11.1 0.0 1.6 2 0 0 2 2 2 0 Ribosomal L30 N-terminal domain DHHC PF01529.20 ORF68118 - 2.7 8.1 9.8 36 4.5 7.5 2.1 1 1 1 2 2 2 0 DHHC palmitoyltransferase 4PPT_N PF17837.1 ORF67754 - 0.54 10.4 6.9 0.081 13.1 2.8 1.7 2 0 0 2 2 2 0 4'-phosphopantetheinyl transferase N-terminal domain TrbC PF04956.13 ORF67406 - 0.089 13.0 4.1 11 6.4 3.3 2.2 2 0 0 2 2 2 0 TrbC/VIRB2 family Ank_2 PF12796.7 ORF66253 - 2.8e-08 34.2 0.7 1.3e-05 25.7 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF66253 - 4.6e-05 23.9 1.5 0.0024 18.4 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF66253 - 0.0038 17.5 0.4 0.94 9.9 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF66253 - 0.087 13.4 1.2 9.7 7.1 0.0 3.1 4 0 0 4 4 4 0 Ankyrin repeat DUF505 PF04458.12 ORF65090 - 0.1 11.0 0.1 0.12 10.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) 2-oxoacid_dh PF00198.23 ORF64655 - 2.6e-15 56.5 0.0 4.9e-15 55.6 0.0 1.3 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Proteasome PF00227.26 ORF63352 - 1.6e-29 102.8 0.2 2e-29 102.4 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF63352 - 3.3e-05 23.5 0.0 5.9e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Pkinase PF00069.25 ORF63 - 1.1e-40 139.7 0.3 1.2e-40 139.5 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63 - 3.8e-28 98.5 0.1 4.2e-28 98.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF63 - 1.2e-06 27.6 0.0 1.6e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF63 - 2.5e-06 26.7 0.1 2.8e-06 26.5 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF63 - 1e-05 25.0 0.1 1.3e-05 24.7 0.1 1.4 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF63 - 9.9e-05 21.8 0.2 0.00011 21.6 0.2 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF63 - 0.022 14.4 0.1 0.024 14.3 0.1 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 CLASP_N PF12348.8 ORF62771 - 0.04 13.5 0.0 0.071 12.7 0.0 1.3 1 0 0 1 1 1 0 CLASP N terminal adh_short PF00106.25 ORF60417 - 6.9e-14 51.8 0.0 8.5e-14 51.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF60417 - 2.2e-07 30.7 0.0 2.6e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short_C2 PF13561.6 ORF5969 - 2.2e-26 92.9 0.0 2.6e-26 92.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF5969 - 7.1e-23 81.1 0.1 8.2e-23 80.9 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase PPR_3 PF13812.6 ORF59179 - 5.1e-08 32.9 0.0 0.0011 19.1 0.0 2.3 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF59179 - 2.3e-07 30.9 0.1 0.00033 20.8 0.0 2.4 1 1 1 2 2 2 2 PPR repeat family PPR_1 PF12854.7 ORF59179 - 0.0075 15.9 0.9 0.011 15.5 0.1 1.6 2 0 0 2 2 2 1 PPR repeat PPR PF01535.20 ORF59179 - 0.18 12.1 1.2 4.1 7.9 1.2 2.7 1 1 0 1 1 1 0 PPR repeat Acetyltransf_17 PF17668.1 ORF59081 - 0.11 13.3 0.1 0.14 13.0 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Phage_int_SAM_2 PF12834.7 ORF58584 - 0.03 15.0 0.0 0.056 14.1 0.0 1.4 1 0 0 1 1 1 0 Phage integrase, N-terminal Cyt-b5 PF00173.28 ORF57662 - 3.4e-14 52.7 0.0 6.4e-14 51.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain NdhS PF11623.8 ORF57662 - 0.11 12.1 0.0 0.63 9.8 0.0 2.1 2 0 0 2 2 2 0 NAD(P)H dehydrogenase subunit S IMUP PF15761.5 ORF57054 - 1.9 9.2 9.3 2.8 8.7 9.3 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein N_methyl PF07963.12 ORF5702 - 1.6e-07 30.6 1.1 2.5e-07 30.0 1.1 1.3 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif GspL_C PF12693.7 ORF5702 - 0.0097 15.8 2.2 0.017 15.0 2.2 1.3 1 0 0 1 1 1 1 GspL periplasmic domain TPR_21 PF09976.9 ORF5702 - 0.014 15.2 0.4 0.018 14.8 0.4 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain DUF2922 PF11148.8 ORF55900 - 0.024 14.3 1.7 1.9 8.3 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2922) Ribosomal_S20p PF01649.18 ORF55900 - 0.7 10.6 6.3 3.8 8.2 1.8 2.2 1 1 1 2 2 2 0 Ribosomal protein S20 Zn_ribbon_SprT PF17283.2 ORF55804 - 0.062 13.2 2.2 0.062 13.2 2.2 3.0 3 0 0 3 3 3 0 SprT-like zinc ribbon domain LRR_1 PF00560.33 ORF53235 - 0.005 17.2 2.3 3.6 8.5 0.0 3.3 3 1 0 3 3 3 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF53235 - 0.012 16.0 4.1 2.8 8.5 0.1 3.2 2 1 1 3 3 3 0 Leucine Rich repeats (2 copies) LVIVD PF08309.11 ORF53235 - 0.069 12.5 0.2 11 5.4 0.1 2.5 2 0 0 2 2 2 0 LVIVD repeat LRR_6 PF13516.6 ORF53235 - 0.1 12.7 7.3 8.6 6.7 0.0 4.4 4 0 0 4 4 4 0 Leucine Rich repeat DUF4252 PF14060.6 ORF52954 - 0.17 11.8 0.1 0.17 11.8 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4252) ESM4 PF15952.5 ORF52954 - 0.34 11.3 9.1 0.47 10.9 9.1 1.1 1 0 0 1 1 1 0 Enhancer of split M4 family PNISR PF15996.5 ORF52954 - 1.1 9.5 26.8 1.4 9.2 26.8 1.1 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR Paramyxo_ncap PF00973.19 ORF52954 - 4.3 6.1 8.2 5.3 5.8 8.2 1.1 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Sec62 PF03839.16 ORF52954 - 9.3 5.7 10.7 10 5.5 10.7 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 Nop25 PF09805.9 ORF52954 - 9.9 6.6 27.6 8 6.9 26.3 1.5 1 1 0 1 1 1 0 Nucleolar protein 12 (25kDa) PhoLip_ATPase_C PF16212.5 ORF52499 - 1e-05 25.4 0.8 1.2e-05 25.2 0.8 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal ATP-synt_8 PF00895.20 ORF52499 - 4.6 7.8 6.0 1.7 9.2 2.3 2.2 1 1 1 2 2 2 0 ATP synthase protein 8 MIG-14_Wnt-bd PF06664.12 ORF51439 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF51439 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF51439 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF51439 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF51439 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF51439 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF51439 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF51439 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF51439 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF51439 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF51439 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF51439 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF51439 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) PsiE PF06146.12 ORF50197 - 0.011 16.1 1.7 0.024 15.0 1.7 1.5 1 0 0 1 1 1 0 Phosphate-starvation-inducible E 2-oxoacid_dh PF00198.23 ORF49030 - 2.9e-15 56.4 0.0 5.4e-15 55.5 0.0 1.3 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Transket_pyr PF02779.24 ORF48561 - 1.6e-19 70.3 0.0 1.9e-19 70.0 0.0 1.1 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain OxoGdeHyase_C PF16870.5 ORF48561 - 3.2e-07 30.1 0.0 4.9e-07 29.5 0.0 1.3 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal DUF2380 PF09533.10 ORF48431 - 0.1 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) Acetyltransf_17 PF17668.1 ORF4838 - 0.11 13.3 0.1 0.14 13.0 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain RNase_II_C_S1 PF18614.1 ORF47784 - 0.19 11.7 0.0 0.3 11.1 0.0 1.3 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain Phage_RpbA PF10789.9 ORF45377 - 0.011 15.8 0.1 0.015 15.4 0.1 1.3 1 0 0 1 1 1 0 Phage RNA polymerase binding, RpbA EF-hand_7 PF13499.6 ORF45239 - 6.6e-16 58.5 6.7 1.9e-13 50.6 0.1 2.6 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF45239 - 4.2e-15 54.1 22.3 7.6e-07 28.2 0.6 5.1 5 1 0 5 5 5 3 EF hand EF-hand_6 PF13405.6 ORF45239 - 1.1e-13 49.9 15.3 1.5e-07 30.8 0.3 5.2 4 2 1 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF45239 - 1.1e-07 31.6 13.0 6e-06 26.0 0.1 4.6 3 2 1 4 4 4 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF45239 - 8.8e-06 26.0 0.3 7.3e-05 23.0 0.1 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF45239 - 0.0031 16.9 0.4 0.0031 16.9 0.4 4.8 4 1 1 5 5 5 2 EF hand PSS PF03034.15 ORF44471 - 6.6e-07 29.3 0.3 1.1e-06 28.7 0.1 1.4 2 0 0 2 2 2 1 Phosphatidyl serine synthase MCU PF04678.13 ORF44471 - 0.1 12.7 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Mitochondrial calcium uniporter APC_u9 PF16633.5 ORF42681 - 0.22 12.6 4.2 0.1 13.7 1.9 1.6 2 0 0 2 2 2 0 Unstructured region on APC between 1st two creatine-rich regions DUF4025 PF13217.6 ORF42681 - 1.6 8.6 7.3 9.3 6.2 0.3 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF4025) YlaC PF10777.9 ORF42563 - 3.7e-68 228.2 0.3 4.1e-68 228.1 0.3 1.0 1 0 0 1 1 1 1 Inner membrane protein YlaC Glyco_hydro_31 PF01055.26 ORF42327 - 1.2e-44 153.2 0.2 1.4e-44 153.0 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Proteasome PF00227.26 ORF42189 - 1.6e-29 102.8 0.2 2e-29 102.4 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF42189 - 3.3e-05 23.5 0.0 5.9e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature DUF2967 PF11179.8 ORF41445 - 0.042 12.0 0.0 0.047 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2967) U5_2-snRNA_bdg PF10597.9 ORF41445 - 0.089 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 U5-snRNA binding site 2 of PrP8 MIG-14_Wnt-bd PF06664.12 ORF41289 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF41289 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF41289 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF41289 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF41289 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF41289 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF41289 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF41289 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF41289 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF41289 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF41289 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF41289 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF41289 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Proteasome PF00227.26 ORF41083 - 1.6e-29 102.8 0.2 2e-29 102.4 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF41083 - 3.3e-05 23.5 0.0 5.9e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature EF-hand_7 PF13499.6 ORF39697 - 3.5e-13 49.8 0.0 5.9e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF39697 - 1.5e-12 46.1 0.1 3.9e-05 22.9 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF39697 - 7.1e-12 45.0 0.4 1.1e-05 25.2 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF39697 - 3.3e-09 35.8 0.0 1.6e-05 24.2 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF39697 - 1.5e-08 33.9 0.2 6.9e-05 22.5 0.0 2.4 1 1 1 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF39697 - 1.8e-07 31.4 0.1 2.3e-07 31.1 0.1 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF39697 - 0.00011 21.0 0.0 0.00012 20.8 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5580) EF-hand_11 PF08976.11 ORF39697 - 0.00026 21.8 0.1 0.00042 21.1 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF39697 - 0.002 18.1 0.1 0.0056 16.6 0.1 1.7 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 ORF39697 - 0.0055 16.9 0.4 1.9 8.7 0.0 2.3 2 0 0 2 2 2 2 Dockerin type I domain Ribosomal_L27_C PF18471.1 ORF39697 - 0.0097 15.3 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal L27 protein C-terminal domain EF-hand_10 PF14788.6 ORF39697 - 0.011 15.6 0.0 0.81 9.6 0.0 2.2 1 1 1 2 2 2 0 EF hand TerB PF05099.13 ORF39697 - 0.012 15.5 0.8 0.026 14.5 0.7 1.6 1 1 0 1 1 1 0 Tellurite resistance protein TerB EF-hand_9 PF14658.6 ORF39697 - 0.015 15.6 0.0 0.045 14.1 0.0 1.7 2 0 0 2 2 2 0 EF-hand domain Methyltransf_11 PF08241.12 ORF38640 - 6.5e-17 62.0 0.0 1.1e-16 61.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF38640 - 2.2e-11 44.3 0.0 4.5e-11 43.3 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF38640 - 1.3e-09 38.0 0.0 1.6e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF38640 - 1.3e-08 34.9 0.0 1.6e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF38640 - 4e-07 29.6 0.0 5.2e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF38640 - 1.9e-06 28.5 0.0 6.5e-06 26.8 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_8 PF05148.15 ORF38640 - 0.00034 20.5 0.0 0.00043 20.2 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_29 PF03141.16 ORF38640 - 0.0031 16.1 0.0 0.0036 15.9 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Proteasome PF00227.26 ORF3829 - 1.6e-29 102.8 0.2 2e-29 102.4 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF3829 - 3.3e-05 23.5 0.0 5.9e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature DUF1654 PF07867.11 ORF37027 - 0.034 13.9 0.1 0.062 13.0 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1654) ChapFlgA PF13144.6 ORF36319 - 8.4e-26 90.4 0.9 1.1e-25 90.0 0.9 1.2 1 0 0 1 1 1 1 Chaperone for flagella basal body P-ring formation SAF PF08666.12 ORF36319 - 6.9e-09 36.2 0.0 5.1e-08 33.4 0.0 2.0 2 0 0 2 2 2 1 SAF domain ACP_syn_III_C PF08541.10 ORF36319 - 0.00037 20.6 0.0 0.23 11.7 0.0 2.3 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ChapFlgA_N PF17656.1 ORF36319 - 0.041 14.0 0.4 0.26 11.5 0.1 2.4 3 0 0 3 3 3 0 FlgA N-terminal domain BAMBI PF06211.12 ORF35077 - 0.15 12.3 0.2 0.22 11.8 0.2 1.2 1 0 0 1 1 1 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain HxlR PF01638.17 ORF33846 - 2.5e-32 110.6 0.1 1.2e-31 108.3 0.0 1.8 1 1 1 2 2 2 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 ORF33846 - 0.022 14.6 0.2 0.18 11.7 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Peptidase_M41 PF01434.18 ORF32706 - 9.5e-27 94.1 1.7 2.4e-26 92.8 1.7 1.6 1 1 0 1 1 1 1 Peptidase family M41 Cep57_MT_bd PF06657.13 ORF32706 - 0.0024 18.3 0.4 0.0049 17.3 0.4 1.5 1 0 0 1 1 1 1 Centrosome microtubule-binding domain of Cep57 Pkinase PF00069.25 ORF32291 - 8.1e-35 120.4 0.1 9.1e-35 120.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF32291 - 1e-18 67.6 0.0 1.1e-18 67.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF32291 - 0.02 14.8 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF32291 - 0.023 14.0 0.1 0.037 13.4 0.1 1.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF32291 - 0.11 11.4 0.4 0.13 11.1 0.4 1.1 1 0 0 1 1 1 0 Haspin like kinase domain TMEM154 PF15102.6 ORF31380 - 1.3e-06 28.4 3.3 2.5e-06 27.5 3.3 1.5 1 1 0 1 1 1 1 TMEM154 protein family Insulin_TMD PF17870.1 ORF31380 - 0.0044 17.1 0.8 0.0065 16.5 0.8 1.3 1 0 0 1 1 1 1 Insulin receptor trans-membrane segment Podoplanin PF05808.11 ORF31380 - 0.0046 17.1 4.9 0.0086 16.2 4.9 1.4 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF31380 - 0.0051 16.3 0.5 0.0056 16.1 0.5 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5305) Sigma_reg_N PF13800.6 ORF31380 - 0.0066 16.7 0.8 0.015 15.5 0.8 1.6 1 0 0 1 1 1 1 Sigma factor regulator N-terminal CD34_antigen PF06365.12 ORF31380 - 0.016 14.8 0.0 0.027 14.0 0.0 1.4 1 0 0 1 1 1 0 CD34/Podocalyxin family SCF PF02404.15 ORF31380 - 0.037 13.4 0.4 0.085 12.2 0.3 1.6 1 1 1 2 2 2 0 Stem cell factor DUF1310 PF07006.11 ORF31380 - 0.046 13.7 0.0 0.088 12.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1310) DHHC PF01529.20 ORF31380 - 0.09 12.9 0.8 0.12 12.5 0.8 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Ribosomal_L34 PF00468.17 ORF3104 - 0.0014 18.5 11.3 0.045 13.7 11.3 2.3 1 1 0 1 1 1 1 Ribosomal protein L34 DUF4946 PF16304.5 ORF30909 - 0.12 12.1 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4946) HisKA PF00512.25 ORF30616 - 0.00013 21.9 0.4 0.00037 20.5 0.4 1.8 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 ORF30616 - 0.048 14.2 0.0 0.12 12.9 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MORN PF02493.20 ORF30448 - 8.9e-38 126.0 40.9 1.7e-07 30.7 0.8 7.5 8 0 0 8 8 8 7 MORN repeat DUF3048_C PF17479.2 ORF30448 - 0.0097 16.3 9.1 1 9.8 0.2 3.1 2 1 1 3 3 3 3 Protein of unknown function (DUF3048) C-terminal domain ID PF18543.1 ORF30448 - 0.7 10.0 4.4 32 4.6 0.0 4.3 5 0 0 5 5 5 0 Intracellular delivery domain MIG-14_Wnt-bd PF06664.12 ORF3009 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF3009 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF3009 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF3009 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF3009 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF3009 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF3009 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF3009 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF3009 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF3009 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF3009 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF3009 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF3009 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) ER_lumen_recept PF00810.18 ORF29142 - 6.1e-30 105.0 7.1 8.4e-30 104.5 7.1 1.2 1 0 0 1 1 1 1 ER lumen protein retaining receptor PQ-loop PF04193.14 ORF29142 - 0.026 14.3 4.1 0.079 12.8 2.5 2.2 2 0 0 2 2 2 0 PQ loop repeat DUF2922 PF11148.8 ORF28851 - 0.024 14.3 1.7 1.9 8.3 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2922) Ribosomal_S20p PF01649.18 ORF28851 - 0.7 10.6 6.3 3.8 8.2 1.8 2.2 1 1 1 2 2 2 0 Ribosomal protein S20 DUF5541 PF17695.1 ORF25192 - 0.11 12.9 7.4 1.9 8.9 0.6 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5541) DivIC PF04977.15 ORF23004 - 0.0002 21.1 1.0 0.0002 21.1 1.0 3.1 3 1 1 4 4 4 2 Septum formation initiator SlyX PF04102.12 ORF23004 - 0.0031 18.1 0.9 0.0031 18.1 0.9 3.1 2 1 1 3 3 3 1 SlyX Peptidase_M61 PF05299.12 ORF23004 - 0.079 13.4 0.3 0.21 12.0 0.3 1.8 1 1 0 1 1 1 0 M61 glycyl aminopeptidase MscS_porin PF12795.7 ORF23004 - 0.079 12.5 21.3 0.028 14.0 15.7 2.0 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain Raftlin PF15250.6 ORF23004 - 0.088 11.5 6.8 0.096 11.4 6.8 1.0 1 0 0 1 1 1 0 Raftlin DUF3533 PF12051.8 ORF23004 - 0.58 9.0 3.3 0.64 8.9 3.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) KfrA_N PF11740.8 ORF23004 - 1.1 9.9 9.4 4.5 8.0 7.7 2.2 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term FlaC_arch PF05377.11 ORF23004 - 1.2 9.6 18.5 0.21 12.0 3.2 3.4 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) DUF4472 PF14739.6 ORF23004 - 1.7 9.4 23.1 2.5 8.9 8.5 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) PCRF PF03462.18 ORF23004 - 1.8 8.4 19.0 3 7.7 6.9 2.0 1 1 1 2 2 2 0 PCRF domain Sipho_Gp157 PF05565.11 ORF23004 - 2.3 8.2 23.4 3.8 7.5 12.1 2.2 1 1 1 2 2 2 0 Siphovirus Gp157 UPF0242 PF06785.11 ORF23004 - 6.4 6.8 25.3 8.3 6.5 7.6 2.3 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus RCC1_2 PF13540.6 ORF22928 - 7.3e-11 41.6 7.0 0.034 13.9 0.3 4.2 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF22928 - 0.013 15.8 1.0 1.7 9.0 0.1 2.5 1 1 2 3 3 3 0 TFIIH p62 subunit, N-terminal domain DUF155 PF02582.14 ORF22928 - 0.33 11.1 9.2 14 5.7 0.0 3.9 1 1 2 3 3 3 0 Uncharacterised ACR, YagE family COG1723 adh_short PF00106.25 ORF22197 - 0.12 11.9 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 short chain dehydrogenase U-box PF04564.15 ORF21451 - 1e-09 38.4 0.0 2e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 U-box domain Phage_portal PF04860.12 ORF21451 - 0.037 13.2 0.0 0.054 12.7 0.0 1.3 1 0 0 1 1 1 0 Phage portal protein Acetyltransf_17 PF17668.1 ORF20230 - 0.11 13.3 0.1 0.14 13.0 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain RRM_1 PF00076.22 ORF19882 - 7e-06 25.8 0.0 1.2e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF3144 PF11342.8 ORF18110 - 0.075 13.3 0.3 0.18 12.1 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3144) Indigoidine_A PF04227.12 ORF18110 - 0.12 11.7 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Indigoidine synthase A like protein DUF1801 PF08818.11 ORF1687 - 0.097 13.2 0.0 0.15 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DU1801) DUF1573 PF07610.11 ORF16523 - 0.0043 17.1 0.3 0.016 15.2 0.3 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1573) ASH PF15780.5 ORF16523 - 0.034 14.4 0.0 0.065 13.4 0.0 1.5 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin FAM35_C PF15793.5 ORF16523 - 0.16 11.3 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal DUF4585 PF15232.6 ORF14699 - 0.019 15.0 0.3 0.054 13.5 0.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4585) LmjF365940-deam PF14421.6 ORF13814 - 6.7e-26 91.1 0.7 1.3e-17 64.1 0.1 2.1 1 1 1 2 2 2 2 A distinct subfamily of CDD/CDA-like deaminases dCMP_cyt_deam_1 PF00383.23 ORF13814 - 0.00024 21.0 0.1 0.00033 20.5 0.1 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MAPEG PF01124.18 ORF1362 - 7.5e-14 51.7 0.8 1.1e-13 51.2 0.8 1.3 1 1 0 1 1 1 1 MAPEG family TRP PF06011.12 ORF13513 - 0.025 13.3 24.7 0.13 11.0 24.7 1.8 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel UPF0139 PF03669.13 ORF13513 - 0.14 12.1 6.3 0.052 13.4 3.5 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) UPF0242 PF06785.11 ORF13004 - 0.034 14.2 8.7 0.036 14.2 8.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Spc7 PF08317.11 ORF13004 - 0.034 13.0 8.1 0.044 12.7 8.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein bZIP_1 PF00170.21 ORF13004 - 0.041 14.0 15.7 0.13 12.3 2.3 3.2 1 1 2 3 3 3 0 bZIP transcription factor ADIP PF11559.8 ORF13004 - 0.043 13.9 8.8 0.063 13.4 8.8 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding RTBV_P46 PF06216.11 ORF13004 - 0.061 12.2 5.1 0.081 11.8 2.1 1.9 1 1 1 2 2 2 0 Rice tungro bacilliform virus P46 protein Seryl_tRNA_N PF02403.22 ORF13004 - 0.073 13.3 8.3 0.11 12.7 8.3 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain JAKMIP_CC3 PF16034.5 ORF13004 - 0.1 12.5 8.9 0.16 11.9 8.9 1.2 1 0 0 1 1 1 0 JAKMIP CC3 domain FapA PF03961.13 ORF13004 - 0.14 10.7 7.5 0.15 10.6 7.5 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF3450 PF11932.8 ORF13004 - 0.18 11.1 8.8 0.39 10.0 8.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) TMF_TATA_bd PF12325.8 ORF13004 - 0.23 11.7 11.1 2.9 8.2 1.2 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF4315 PF14193.6 ORF13004 - 0.23 11.5 9.3 0.51 10.4 8.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4315) DivIC PF04977.15 ORF13004 - 0.25 11.1 12.5 1.2 9.0 2.5 2.4 1 1 0 2 2 2 0 Septum formation initiator DUF1664 PF07889.12 ORF13004 - 0.29 11.2 6.6 0.45 10.6 5.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Prefoldin_2 PF01920.20 ORF13004 - 0.43 10.6 12.9 0.37 10.8 4.9 2.2 1 1 1 2 2 2 0 Prefoldin subunit TMPIT PF07851.13 ORF13004 - 0.47 9.7 7.3 0.54 9.5 7.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein bZIP_2 PF07716.15 ORF13004 - 0.49 10.5 13.8 1 9.5 4.1 3.1 1 1 2 3 3 3 0 Basic region leucine zipper DUF2570 PF10828.8 ORF13004 - 0.99 9.3 5.8 1.8 8.5 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) APG6_N PF17675.1 ORF13004 - 1.4 9.4 13.7 3.2 8.3 13.7 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region YabA PF06156.13 ORF13004 - 4.1 8.1 10.0 17 6.1 10.0 2.0 1 1 0 1 1 1 0 Initiation control protein YabA Takusan PF04822.13 ORF13004 - 5.1 7.0 12.6 1.2 9.1 3.8 2.3 1 1 1 2 2 2 0 Takusan DUF2922 PF11148.8 ORF12069 - 0.024 14.3 1.7 1.9 8.3 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2922) Ribosomal_S20p PF01649.18 ORF12069 - 0.7 10.6 6.3 3.8 8.2 1.8 2.2 1 1 1 2 2 2 0 Ribosomal protein S20 MIG-14_Wnt-bd PF06664.12 ORF11763 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF11763 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF11763 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF11763 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF11763 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF11763 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF11763 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF11763 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF11763 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF11763 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF11763 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF11763 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF11763 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Arch_flagellin PF01917.16 ORF11753 - 0.14 12.3 1.3 0.19 11.9 1.3 1.2 1 0 0 1 1 1 0 Archaebacterial flagellin DUF4692 PF15763.5 ORF11753 - 0.29 11.6 6.0 0.8 10.2 4.1 2.0 1 1 1 2 2 2 0 Regulator of human erythroid cell expansion (RHEX) DUF4538 PF15061.6 ORF11753 - 1 9.2 3.7 0.34 10.7 0.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) PTPlike_phytase PF14566.6 ORF11753 - 1.1 9.4 12.0 1.3 9.2 2.2 2.1 1 1 1 2 2 2 0 Inositol hexakisphosphate PdaC PF13739.6 ORF11753 - 2.7 9.0 11.2 0.74 10.8 2.1 2.1 1 1 1 2 2 2 0 Deacetylase PdaC Proteasome PF00227.26 ORF112519 - 1.6e-29 102.8 0.2 2e-29 102.4 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF112519 - 3.3e-05 23.5 0.0 5.9e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Tim17 PF02466.19 ORF10977 - 9.7e-07 29.1 0.0 1.3e-06 28.7 0.0 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Minor_capsid_2 PF11114.8 ORF109755 - 0.015 15.3 0.0 0.029 14.4 0.0 1.5 2 0 0 2 2 2 0 Minor capsid protein COX7a PF02238.15 ORF10945 - 0.058 13.8 0.6 0.058 13.8 0.6 1.6 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII PIP49_N PF14875.6 ORF10945 - 0.12 12.3 0.9 0.18 11.6 0.9 1.3 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 Aldo_ket_red PF00248.21 ORF10932 - 4.2e-20 72.1 0.0 4.9e-20 71.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family HU-CCDC81_euk_1 PF14908.6 ORF10932 - 0.15 12.3 0.1 4.4 7.5 0.0 2.2 2 0 0 2 2 2 0 CCDC81 eukaryotic HU domain 1 CENP-T_N PF16171.5 ORF109237 - 0.00011 21.3 0.6 0.00016 20.7 0.6 1.3 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T N-terminus DUF3896 PF13035.6 ORF108793 - 0.016 15.3 0.3 0.24 11.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3896) Tti2 PF10521.9 ORF108793 - 0.06 12.9 0.0 0.077 12.5 0.0 1.1 1 0 0 1 1 1 0 Tti2 family Herpes_BLRF2 PF05812.12 ORF108793 - 0.095 12.8 0.2 0.15 12.2 0.2 1.4 1 0 0 1 1 1 0 Herpesvirus BLRF2 protein WD40 PF00400.32 ORF106898 - 0.0023 18.7 0.1 3.4 8.7 0.0 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat RNA_pol_N PF01194.17 ORF106513 - 0.12 12.6 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 RNA polymerases N / 8 kDa subunit MORN PF02493.20 ORF105773 - 6.8e-34 113.7 34.2 1.5e-08 34.0 0.5 5.2 5 0 0 5 5 5 5 MORN repeat Tudor_2 PF18104.1 ORF105773 - 3.3 7.5 7.0 25 4.7 0.5 3.5 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain DUF4483 PF14825.6 ORF105575 - 3.1e-14 53.0 0.1 3.1e-14 53.0 0.1 1.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4483) HypA PF01155.19 NODE_43392_length_463_cov_2.978972_g35712_i0forward_frame_1 - 0.051 13.6 0.4 8.3 6.5 0.0 2.2 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Transpos_assoc PF13963.6 NODE_43392_length_463_cov_2.978972_g35712_i0forward_frame_1 - 0.22 11.9 1.2 0.27 11.6 0.2 1.7 2 0 0 2 2 2 0 Transposase-associated domain Birna_VP5 PF03042.14 NODE_43387_length_463_cov_3.862150_g35707_i0reverse_frame_1 - 0.1 12.6 0.2 0.14 12.2 0.2 1.2 1 0 0 1 1 1 0 Birnavirus VP5 protein DUF3332 PF11810.8 NODE_43381_length_463_cov_62.299065_g35701_i0forward_frame_1 - 0.014 15.1 0.1 0.026 14.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks141.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks141.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks141.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks141.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:49:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FKS1_dom1 PF14288.6 NODE_43346_length_463_cov_854.810748_g35668_i0reverse_frame_1 - 0.22 11.9 4.0 0.4 11.0 4.0 1.7 1 1 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 FNIP PF05725.12 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_1 - 1.7e-19 69.7 8.4 1.4e-09 38.0 2.2 2.2 2 0 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_1 - 0.006 16.5 0.2 0.011 15.7 0.2 1.4 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) DUF2922 PF11148.8 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_1 - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2922) LRR_11 PF18831.1 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_1 - 2 8.1 14.4 5.1 6.8 0.7 3.7 3 0 0 3 3 3 0 Leucine-rich repeat DUF4061 PF13270.6 NODE_43334_length_464_cov_1.974359_g35657_i0reverse_frame_1 - 0.034 14.5 0.1 0.049 13.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4061) TEX29 PF15839.5 NODE_43334_length_464_cov_1.974359_g35657_i0forward_frame_1 - 0.3 11.7 6.7 0.097 13.3 3.3 1.8 2 0 0 2 2 2 0 Testis-expressed sequence 29 protein SO_alpha_A3 PF17806.1 NODE_43333_length_464_cov_2.030303_g35656_i0forward_frame_1 - 0.11 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Sarcosine oxidase A3 domain DpnI_C PF17726.1 NODE_43333_length_464_cov_2.030303_g35656_i0forward_frame_1 - 0.47 10.6 3.4 0.55 10.4 0.1 2.4 2 1 0 2 2 2 0 Dam-replacing HTH domain Put_DNA-bind_N PF06971.13 NODE_43330_length_464_cov_2.953380_g35653_i0reverse_frame_1 - 0.16 12.0 0.9 0.78 9.8 0.0 2.3 3 0 0 3 3 3 0 Putative DNA-binding protein N-terminus DUF5528 PF17666.1 NODE_43329_length_464_cov_3.123543_g35652_i0reverse_frame_1 - 1.3 8.9 4.0 0.22 11.5 0.2 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5528) Phage_P2_GpE PF06528.12 NODE_43329_length_464_cov_3.123543_g35652_i0forward_frame_1 - 0.17 11.5 3.9 1.1 8.8 1.1 2.6 2 0 0 2 2 2 0 Phage P2 GpE DNA_RNApol_7kD PF03604.13 NODE_43322_length_464_cov_3.685315_g35645_i0reverse_frame_1 - 0.1 12.3 0.1 0.19 11.5 0.1 1.4 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF4236 PF14020.6 NODE_43322_length_464_cov_3.685315_g35645_i0forward_frame_1 - 0.14 12.7 0.4 0.25 11.9 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4236) DUF5543 PF17697.1 NODE_43320_length_464_cov_14.503497_g35643_i0forward_frame_1 - 0.036 14.4 0.3 0.052 13.8 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5543) Ras PF00071.22 NODE_43317_length_464_cov_66.172494_g35640_i0reverse_frame_1 - 5.7e-33 113.8 0.1 8.7e-33 113.2 0.1 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_43317_length_464_cov_66.172494_g35640_i0reverse_frame_1 - 1e-12 48.4 0.1 5e-12 46.1 0.0 1.9 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_43317_length_464_cov_66.172494_g35640_i0reverse_frame_1 - 0.016 14.7 0.0 0.019 14.4 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family PdxJ PF03740.13 NODE_43314_length_464_cov_82.396270_g35637_i0reverse_frame_1 - 0.076 12.1 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthesis protein PdxJ DM4_12 PF07841.13 NODE_43314_length_464_cov_82.396270_g35637_i0reverse_frame_1 - 0.1 13.3 0.0 0.16 12.7 0.0 1.2 1 0 0 1 1 1 0 DM4/DM12 family Kv2channel PF03521.14 NODE_43310_length_464_cov_100.452214_g35633_i0reverse_frame_1 - 0.0015 18.0 4.4 0.0019 17.7 4.1 1.3 1 1 0 1 1 1 1 Kv2 voltage-gated K+ channel DUF5470 PF17564.2 NODE_43299_length_464_cov_191.342657_g35622_i0forward_frame_1 - 0.15 12.3 0.4 0.23 11.7 0.0 1.4 2 0 0 2 2 2 0 Family of unknown function (DUF5470) ArfA PF03889.13 NODE_43283_length_465_cov_2.116279_g35610_i0reverse_frame_1 - 5.2e-06 25.8 0.1 9.8e-06 25.0 0.1 1.5 1 0 0 1 1 1 1 Alternative ribosome-rescue factor A CC2-LZ PF16516.5 NODE_43265_length_465_cov_6.088372_g35592_i0forward_frame_1 - 0.0026 18.1 0.6 0.0026 18.1 0.6 1.9 2 0 0 2 2 2 1 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF1067 PF06362.11 NODE_43265_length_465_cov_6.088372_g35592_i0forward_frame_1 - 0.095 13.5 0.3 0.15 12.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1067) XkdW PF09636.10 NODE_43264_length_465_cov_6.346512_g32509_i1reverse_frame_1 - 0.033 14.3 0.1 0.064 13.3 0.1 1.4 1 0 0 1 1 1 0 XkdW protein Glyco_hydro_67M PF07488.12 NODE_43264_length_465_cov_6.346512_g32509_i1reverse_frame_1 - 0.1 11.6 0.1 1.3 8.0 0.0 2.0 2 0 0 2 2 2 0 Glycosyl hydrolase family 67 middle domain Pkinase PF00069.25 NODE_43263_length_465_cov_24.902326_g35591_i0reverse_frame_1 - 3.6e-10 39.6 0.1 8.1e-10 38.5 0.1 1.6 1 1 0 1 1 1 1 Protein kinase domain NAD_synthase PF02540.17 NODE_43250_length_465_cov_90.111628_g35578_i0reverse_frame_1 - 0.033 13.3 0.0 0.048 12.8 0.0 1.2 1 0 0 1 1 1 0 NAD synthase Herpes_LMP1 PF05297.11 NODE_43242_length_465_cov_137.565116_g35570_i0forward_frame_1 - 7 5.7 8.4 9 5.4 8.4 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF229 PF02995.17 NODE_43216_length_466_cov_1.459397_g35551_i0forward_frame_3 - 1.2e-06 27.4 0.3 1.5e-06 27.2 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Peptidase_S46 PF10459.9 NODE_43216_length_466_cov_1.459397_g35551_i0forward_frame_3 - 0.0043 15.8 0.1 0.0045 15.7 0.1 1.0 1 0 0 1 1 1 1 Peptidase S46 DUF1870 PF08965.10 NODE_43216_length_466_cov_1.459397_g35551_i0forward_frame_3 - 0.28 11.2 3.5 0.38 10.8 0.2 2.5 2 2 2 4 4 4 0 Domain of unknown function (DUF1870) Aldedh PF00171.22 NODE_43215_length_466_cov_1.624130_g35550_i0reverse_frame_2 - 1.3e-54 185.5 0.1 1.4e-54 185.4 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family MHB PF16525.5 NODE_43215_length_466_cov_1.624130_g35550_i0reverse_frame_2 - 0.16 12.2 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 Haemophore, haem-binding FUSC PF04632.12 NODE_43215_length_466_cov_1.624130_g35550_i0forward_frame_2 - 0.13 10.8 0.2 0.16 10.5 0.2 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF948 PF06103.11 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.0023 18.2 0.3 0.0023 18.2 0.3 1.8 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) HALZ PF02183.18 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.0088 16.2 0.1 0.017 15.4 0.1 1.5 1 0 0 1 1 1 1 Homeobox associated leucine zipper CCD PF07860.11 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.052 13.6 2.5 0.072 13.1 2.5 1.2 1 0 0 1 1 1 0 WisP family C-Terminal Region bZIP_1 PF00170.21 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.052 13.7 0.3 0.052 13.7 0.3 2.2 2 0 0 2 2 2 0 bZIP transcription factor Cnn_1N PF07989.11 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.36 11.0 4.3 0.16 12.2 0.8 2.1 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 CAF-1_p150 PF11600.8 NODE_43207_length_466_cov_2.225058_g35542_i0reverse_frame_3 - 1.2 8.8 20.7 1.5 8.5 11.6 2.1 2 0 0 2 2 2 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal OrfB_IS605 PF01385.19 NODE_43207_length_466_cov_2.225058_g35542_i0reverse_frame_3 - 7.6 6.8 12.7 0.2 11.9 0.8 2.5 1 1 1 2 2 2 0 Probable transposase FliM PF02154.15 NODE_43207_length_466_cov_2.225058_g35542_i0forward_frame_3 - 0.022 14.6 0.3 0.033 14.1 0.3 1.2 1 0 0 1 1 1 0 Flagellar motor switch protein FliM PRK PF00485.18 NODE_43206_length_466_cov_2.375870_g35541_i0forward_frame_3 - 2.7e-33 115.4 0.2 3.1e-33 115.2 0.2 1.0 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family CoaE PF01121.20 NODE_43206_length_466_cov_2.375870_g35541_i0forward_frame_3 - 0.093 12.4 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Dephospho-CoA kinase TPR_1 PF00515.28 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 5.5e-15 54.5 3.1 0.0009 19.0 0.0 4.1 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 2.3e-13 49.2 0.2 0.0086 16.1 0.0 4.5 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 3.2e-08 33.1 1.2 0.00029 20.5 0.2 3.5 1 1 3 4 4 4 1 TPR repeat TPR_17 PF13431.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 5.1e-07 29.6 1.2 0.75 10.3 0.0 4.1 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 7.9e-07 29.1 0.0 0.04 14.1 0.0 3.0 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 3.9e-06 27.2 0.9 0.09 13.5 0.0 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 7.4e-06 26.5 0.0 0.07 13.8 0.0 3.8 1 1 3 4 4 4 1 Tetratricopeptide repeat PknG_TPR PF16918.5 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 1.5e-05 23.9 0.0 2.9e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase G tetratricopeptide repeat TPR_19 PF14559.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 2.8e-05 24.5 0.1 0.43 11.1 0.0 3.5 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 5.6e-05 23.4 0.2 0.036 14.4 0.1 2.9 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.0006 19.8 8.0 3.4 8.1 0.0 4.8 5 0 0 5 5 5 2 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.0099 15.5 0.0 0.065 12.9 0.0 2.1 2 1 0 2 2 2 1 Bacterial type III secretion protein (HrpB1_HrpK) TPR_14 PF13428.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.016 16.0 0.0 93 4.3 0.0 4.0 1 1 4 5 5 5 0 Tetratricopeptide repeat DUF1947 PF09183.10 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.029 14.7 1.8 5.9 7.3 0.0 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF1947) DUF3808 PF10300.9 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.053 12.3 0.1 0.071 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3808) Elf1 PF05129.13 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.16 12.0 0.1 0.28 11.3 0.1 1.4 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like Spo0M PF07070.11 NODE_43201_length_466_cov_2.967517_g35536_i0reverse_frame_2 - 0.23 11.0 0.0 0.31 10.6 0.0 1.1 1 0 0 1 1 1 0 SpoOM protein NOPS PF08075.11 NODE_43191_length_466_cov_5.368910_g35526_i0reverse_frame_3 - 0.084 13.1 0.6 18 5.6 0.0 2.4 2 0 0 2 2 2 0 NOPS (NUC059) domain Cactin_mid PF10312.9 NODE_43191_length_466_cov_5.368910_g35526_i0forward_frame_3 - 0.045 13.5 0.0 5.3 6.7 0.0 2.1 2 0 0 2 2 2 0 Conserved mid region of cactin SieB PF14163.6 NODE_43187_length_466_cov_52.009281_g35522_i0forward_frame_2 - 0.015 14.8 2.0 0.015 14.8 2.0 1.7 2 1 0 2 2 2 0 Super-infection exclusion protein B VanZ PF04892.12 NODE_43187_length_466_cov_52.009281_g35522_i0forward_frame_2 - 4.8 7.8 6.9 0.66 10.6 1.0 2.0 1 1 1 2 2 2 0 VanZ like family Kre28 PF17097.5 NODE_43186_length_466_cov_55.245940_g35521_i0forward_frame_3 - 0.075 12.0 0.2 0.11 11.4 0.2 1.2 1 0 0 1 1 1 0 Spindle pole body component DiS_P_DiS PF06750.13 NODE_43184_length_466_cov_71.874710_g35519_i0forward_frame_3 - 0.15 12.2 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain DUF4051 PF13260.6 NODE_43184_length_466_cov_71.874710_g35519_i0forward_frame_2 - 0.09 12.5 1.7 0.14 11.9 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) 7TM_GPCR_Srz PF10325.9 NODE_43183_length_466_cov_72.918794_g35518_i0reverse_frame_2 - 0.032 13.6 28.7 0.18 11.1 4.5 2.1 1 1 1 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srz Gaa1 PF04114.14 NODE_43179_length_466_cov_84.784223_g35514_i0forward_frame_3 - 0.082 11.9 1.4 0.1 11.6 1.4 1.1 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component RNase_Zc3h12a PF11977.8 NODE_43179_length_466_cov_84.784223_g35514_i0forward_frame_2 - 0.1 12.4 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain CortBP2 PF09727.9 NODE_43177_length_466_cov_87.000000_g35512_i0reverse_frame_2 - 0.021 14.7 0.3 0.029 14.3 0.3 1.2 1 0 0 1 1 1 0 Cortactin-binding protein-2 Ac81 PF05820.11 NODE_43176_length_466_cov_93.508121_g35511_i0reverse_frame_3 - 1.6 8.3 3.8 3 7.4 0.4 2.0 2 0 0 2 2 2 0 Baculoviridae AC81 Nre_N PF04894.12 NODE_43162_length_466_cov_215.605568_g35497_i1reverse_frame_3 - 0.03 14.2 0.0 0.035 13.9 0.0 1.0 1 0 0 1 1 1 0 Archaeal Nre, N-terminal Vps39_2 PF10367.9 NODE_43162_length_466_cov_215.605568_g35497_i1reverse_frame_2 - 1.3e-15 57.8 0.1 1.7e-15 57.4 0.1 1.1 1 0 0 1 1 1 1 Vacuolar sorting protein 39 domain 2 Nre_N PF04894.12 NODE_43161_length_466_cov_215.605568_g35497_i0reverse_frame_3 - 0.044 13.6 0.0 0.053 13.4 0.0 1.0 1 0 0 1 1 1 0 Archaeal Nre, N-terminal Vps39_2 PF10367.9 NODE_43161_length_466_cov_215.605568_g35497_i0reverse_frame_2 - 1.3e-15 57.8 0.1 1.7e-15 57.4 0.1 1.1 1 0 0 1 1 1 1 Vacuolar sorting protein 39 domain 2 c-SKI_SMAD_bind PF08782.10 NODE_43156_length_466_cov_414.911833_g35492_i0reverse_frame_3 - 0.74 10.1 3.3 3 8.1 0.5 2.3 2 0 0 2 2 2 0 c-SKI Smad4 binding domain SLATT_5 PF18160.1 NODE_43155_length_466_cov_445.136891_g28452_i2reverse_frame_3 - 0.21 10.9 2.9 0.26 10.6 2.9 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Tctex-1 PF03645.13 NODE_43152_length_466_cov_3688.452436_g34058_i4reverse_frame_3 - 1.1e-21 77.0 2.0 1.6e-21 76.5 2.0 1.3 1 0 0 1 1 1 1 Tctex-1 family DXP_redisom_C PF08436.12 NODE_43148_length_466_cov_27600.617169_g35487_i0forward_frame_3 - 0.12 12.5 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Mob_synth_C PF06463.13 NODE_43147_length_467_cov_1.946759_g35486_i0reverse_frame_2 - 0.12 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C LAB_N PF07578.11 NODE_43146_length_467_cov_1.995370_g35485_i0reverse_frame_3 - 0.084 13.0 0.9 0.15 12.2 0.9 1.4 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain GCS2 PF04107.13 NODE_43142_length_467_cov_2.622685_g35481_i0reverse_frame_2 - 1.7e-17 63.8 0.0 7.6e-17 61.6 0.0 1.8 1 1 1 2 2 2 1 Glutamate-cysteine ligase family 2(GCS2) YafO_toxin PF13957.6 NODE_43142_length_467_cov_2.622685_g35481_i0reverse_frame_2 - 0.066 13.3 0.0 0.11 12.5 0.0 1.4 1 1 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system DUF4931 PF16285.5 NODE_43142_length_467_cov_2.622685_g35481_i0reverse_frame_2 - 0.13 11.5 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4931) FtsK_4TM PF13491.6 NODE_43140_length_467_cov_2.974537_g35479_i0forward_frame_2 - 9.9e-28 97.0 5.7 1.2e-27 96.7 5.7 1.1 1 0 0 1 1 1 1 4TM region of DNA translocase FtsK/SpoIIIE Tetraspanin PF00335.20 NODE_43140_length_467_cov_2.974537_g35479_i0forward_frame_2 - 0.3 10.8 4.3 1.8 8.3 2.2 2.0 2 0 0 2 2 2 0 Tetraspanin family DUF2207 PF09972.9 NODE_43140_length_467_cov_2.974537_g35479_i0forward_frame_2 - 0.34 9.6 0.6 0.38 9.4 0.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ProRS-C_1 PF09180.11 NODE_43130_length_467_cov_64.777778_g35469_i0reverse_frame_3 - 1.8e-17 63.3 0.0 2.8e-17 62.7 0.0 1.3 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal LMSTEN PF07988.12 NODE_43130_length_467_cov_64.777778_g35469_i0reverse_frame_3 - 0.004 16.6 0.1 0.012 15.1 0.1 1.8 1 0 0 1 1 1 1 LMSTEN motif Pox_A14 PF05767.12 NODE_43126_length_467_cov_72.942130_g35465_i0forward_frame_3 - 0.0083 16.3 0.3 0.015 15.5 0.3 1.4 1 0 0 1 1 1 1 Poxvirus virion envelope protein A14 Mon1 PF03164.14 NODE_43113_length_467_cov_104.527778_g35453_i0reverse_frame_3 - 0.074 12.1 0.0 0.09 11.8 0.0 1.1 1 0 0 1 1 1 0 Trafficking protein Mon1 Erf4 PF10256.9 NODE_43103_length_467_cov_203.696759_g35443_i0forward_frame_3 - 0.17 12.0 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family ABC2_membrane PF01061.24 NODE_43099_length_467_cov_239.891204_g35439_i0reverse_frame_3 - 1.7e-08 34.1 0.8 1.7e-08 34.1 0.8 1.7 2 0 0 2 2 2 1 ABC-2 type transporter Ion_trans PF00520.31 NODE_43099_length_467_cov_239.891204_g35439_i0reverse_frame_3 - 0.03 13.5 0.0 0.039 13.2 0.0 1.3 1 1 0 1 1 1 0 Ion transport protein DUF5602 PF18197.1 NODE_43097_length_467_cov_293.127315_g35437_i0reverse_frame_2 - 0.14 12.6 0.1 0.33 11.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5602) Med26_C PF15693.5 NODE_43089_length_468_cov_1.563510_g35431_i0reverse_frame_3 - 0.11 12.7 2.2 0.13 12.4 2.2 1.1 1 0 0 1 1 1 0 Mediator complex subunit 26 C-terminal DUF4217 PF13959.6 NODE_43089_length_468_cov_1.563510_g35431_i0reverse_frame_2 - 1.1e-12 48.0 0.0 1.7e-12 47.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) O-antigen_lig PF13425.6 NODE_43089_length_468_cov_1.563510_g35431_i0reverse_frame_2 - 0.3 9.8 4.0 0.34 9.7 4.0 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein TMEM208_SND2 PF05620.11 NODE_43088_length_468_cov_2.226328_g35430_i0forward_frame_3 - 1.4 8.7 5.7 2.1 8.1 5.7 1.3 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 Herpes_PAP PF03325.13 NODE_43085_length_468_cov_2.284065_g35427_i0reverse_frame_3 - 0.0036 16.9 0.1 0.0055 16.3 0.1 1.2 1 0 0 1 1 1 1 Herpesvirus polymerase accessory protein GpcrRhopsn4 PF10192.9 NODE_43085_length_468_cov_2.284065_g35427_i0forward_frame_3 - 4.1e-18 65.7 14.0 4.7e-18 65.5 14.0 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain Frag1 PF10277.9 NODE_43085_length_468_cov_2.284065_g35427_i0forward_frame_3 - 0.00013 21.6 6.6 0.00018 21.1 6.3 1.4 1 1 0 1 1 1 1 Frag1/DRAM/Sfk1 family Serinc PF03348.15 NODE_43085_length_468_cov_2.284065_g35427_i0forward_frame_3 - 0.81 8.6 9.8 1.1 8.2 9.8 1.2 1 0 0 1 1 1 0 Serine incorporator (Serinc) cNMP_binding PF00027.29 NODE_43084_length_468_cov_2.471132_g35426_i0reverse_frame_3 - 1.4e-07 31.5 0.0 1.9e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF5382 PF17354.2 NODE_43083_length_468_cov_2.531178_g35425_i0reverse_frame_2 - 0.0077 15.1 0.1 0.0086 15.0 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5382) Lipin_N PF04571.14 NODE_43080_length_468_cov_2.734411_g35422_i0forward_frame_3 - 4.7e-32 110.0 0.3 7.4e-32 109.4 0.3 1.3 1 0 0 1 1 1 1 lipin, N-terminal conserved region Sporozoite_P67 PF05642.11 NODE_43079_length_468_cov_2.856813_g35421_i0forward_frame_2 - 9.6 4.2 6.1 11 4.0 6.1 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen SHIPPO-rpt PF07004.12 NODE_43072_length_468_cov_3.491917_g35414_i0forward_frame_2 - 0.019 15.8 1.4 3 8.9 0.4 3.5 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat Arch_fla_DE PF04659.13 NODE_43072_length_468_cov_3.491917_g35414_i0forward_frame_2 - 0.16 11.9 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Archaeal flagella protein Amdo_NSP PF12475.8 NODE_43071_length_468_cov_3.568129_g35413_i0reverse_frame_2 - 0.065 13.3 0.2 0.15 12.2 0.2 1.6 1 0 0 1 1 1 0 Amdovirus non-structural protein GNVR PF13807.6 NODE_43071_length_468_cov_3.568129_g35413_i0forward_frame_3 - 8.8e-32 108.9 2.3 2.6e-31 107.4 1.0 2.0 2 0 0 2 2 2 1 G-rich domain on putative tyrosine kinase CDC48_2 PF02933.17 NODE_43071_length_468_cov_3.568129_g35413_i0forward_frame_3 - 0.019 14.7 0.1 0.033 14.0 0.1 1.4 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 Sec34 PF04136.15 NODE_43071_length_468_cov_3.568129_g35413_i0forward_frame_3 - 0.053 13.4 1.4 0.28 11.0 0.7 1.9 1 1 1 2 2 2 0 Sec34-like family OmpH PF03938.14 NODE_43071_length_468_cov_3.568129_g35413_i0forward_frame_3 - 0.068 13.5 3.1 0.096 13.0 3.1 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Spc7 PF08317.11 NODE_43071_length_468_cov_3.568129_g35413_i0forward_frame_3 - 0.2 10.5 3.5 0.25 10.2 3.5 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Lsm_interact PF05391.11 NODE_43070_length_468_cov_4.099307_g35412_i0forward_frame_2 - 0.48 10.0 0.2 0.48 10.0 0.2 2.2 2 0 0 2 2 2 0 Lsm interaction motif Apt1 PF10351.9 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 0.012 14.6 9.2 0.011 14.7 9.2 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain NPR3 PF03666.13 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 0.61 8.8 9.8 0.65 8.7 9.8 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Lin-8 PF03353.15 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 0.74 9.3 3.6 0.98 8.9 3.6 1.2 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Presenilin PF01080.17 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 0.78 8.4 4.9 0.8 8.4 4.9 1.1 1 0 0 1 1 1 0 Presenilin AF-4 PF05110.13 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 2.5 6.1 23.4 2.8 5.9 23.4 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF4692 PF15763.5 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 6.3 7.2 10.3 8.2 6.9 10.3 1.3 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) DUF4834 PF16118.5 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 9.8 7.2 5.8 16 6.5 5.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Glyco_trans_2_3 PF13632.6 NODE_43064_length_468_cov_12.101617_g35406_i0forward_frame_3 - 3.6 7.4 8.2 4.7 7.1 8.2 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 CAP_N PF01213.19 NODE_43064_length_468_cov_12.101617_g35406_i0forward_frame_2 - 5 6.5 15.7 1.4 8.3 1.2 2.2 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) N terminal CvfB_WH PF17783.1 NODE_43062_length_468_cov_33.078522_g35404_i0reverse_frame_2 - 0.04 13.7 0.3 0.092 12.6 0.3 1.7 1 0 0 1 1 1 0 CvfB-like winged helix domain MFS18 PF17352.2 NODE_43059_length_468_cov_60.651270_g35401_i0reverse_frame_3 - 0.055 13.9 0.3 0.088 13.2 0.3 1.3 1 0 0 1 1 1 0 Male Flower Specific protein 18 UPF0121 PF03661.13 NODE_43055_length_468_cov_70.905312_g35398_i0reverse_frame_3 - 0.12 11.7 0.2 0.15 11.4 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) DUF1942 PF09167.11 NODE_43048_length_468_cov_93.540416_g35391_i0forward_frame_2 - 0.14 12.1 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1942) Xrn1_D3 PF18194.1 NODE_43045_length_468_cov_97.782910_g35388_i0reverse_frame_2 - 0.035 14.2 0.2 0.11 12.5 0.1 1.9 2 1 0 2 2 2 0 Exoribonuclease 1 Domain-3 RNA_pol_Rpb1_5 PF04998.17 NODE_43045_length_468_cov_97.782910_g35388_i0reverse_frame_2 - 0.58 9.6 2.5 0.63 9.4 2.5 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 Ins_P5_2-kin PF06090.12 NODE_43044_length_468_cov_100.651270_g35387_i0forward_frame_2 - 0.0011 18.5 0.0 0.0015 18.0 0.0 1.2 1 0 0 1 1 1 1 Inositol-pentakisphosphate 2-kinase KH_7 PF17214.3 NODE_43038_length_468_cov_130.889145_g35381_i0reverse_frame_2 - 0.0024 17.8 0.2 0.0058 16.6 0.0 1.8 2 0 0 2 2 2 1 KH domain DUF815 PF05673.13 NODE_43038_length_468_cov_130.889145_g35381_i0reverse_frame_2 - 0.076 12.2 0.1 0.1 11.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DXP_redisom_C PF08436.12 NODE_43025_length_468_cov_27473.113164_g35372_i0forward_frame_2 - 0.12 12.5 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NADHdh_A3 PF14987.6 NODE_43024_length_468_cov_43037.413395_g30537_i12forward_frame_2 - 0.018 15.3 0.0 0.028 14.7 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 EF-hand_1 PF00036.32 ORF99534 - 4.1e-18 63.5 7.8 4.4e-06 25.8 0.6 4.1 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF99534 - 2e-15 55.3 3.6 1.4e-06 27.8 0.0 4.6 4 1 0 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF99534 - 3.9e-14 52.8 6.9 7.3e-08 32.8 0.2 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF99534 - 8.7e-09 35.1 9.1 5.6e-06 26.1 0.2 3.7 2 2 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF99534 - 2.3e-08 33.1 8.8 0.00019 20.7 0.1 3.1 3 0 0 3 3 3 2 EF hand EF-hand_9 PF14658.6 ORF99534 - 6.5e-07 29.6 0.2 0.00012 22.3 0.0 2.6 2 1 1 3 3 3 1 EF-hand domain EF-hand_11 PF08976.11 ORF99534 - 0.016 16.1 0.4 0.064 14.1 0.1 1.9 2 0 0 2 2 2 0 EF-hand domain DUF5109 PF17134.4 ORF99534 - 0.24 11.3 1.5 2.6 8.0 0.0 2.7 1 1 1 3 3 3 0 Domain of unknown function (DUF5109) IFT43 PF15305.6 ORF99056 - 1e-16 61.4 0.9 1.2e-16 61.1 0.9 1.1 1 0 0 1 1 1 1 Intraflagellar transport protein 43 SelP_N PF04592.14 ORF98086 - 0.8 9.1 8.6 1 8.7 8.6 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region WD40 PF00400.32 ORF97814 - 2.7e-20 72.3 0.0 2.5e-05 24.9 0.1 4.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF97814 - 7.4e-08 32.6 0.5 5.2e-06 26.7 0.1 3.0 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain ApoLp-III PF07464.11 ORF97416 - 0.0013 18.8 5.3 0.0015 18.6 5.3 1.2 1 0 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) FAM184 PF15665.5 ORF97416 - 0.0056 16.5 4.1 0.007 16.2 4.1 1.1 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B Bcr-Abl_Oligo PF09036.10 ORF97416 - 0.0074 16.3 3.0 0.011 15.8 1.3 2.0 1 1 1 2 2 2 1 Bcr-Abl oncoprotein oligomerisation domain DUF2130 PF09903.9 ORF97416 - 0.0098 15.2 1.4 0.011 15.0 1.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2130) FliL PF03748.14 ORF97416 - 0.023 15.3 1.6 0.032 14.8 1.6 1.2 1 0 0 1 1 1 0 Flagellar basal body-associated protein FliL 7TMR-HDED PF07697.11 ORF97416 - 0.027 14.6 4.6 0.035 14.2 4.6 1.0 1 0 0 1 1 1 0 7TM-HD extracellular DUF2570 PF10828.8 ORF97416 - 0.07 12.9 4.2 0.13 12.1 4.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) OmpH PF03938.14 ORF97416 - 0.071 13.4 3.8 0.095 13.0 3.8 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF1664 PF07889.12 ORF97416 - 0.099 12.7 2.1 0.15 12.1 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) FapA PF03961.13 ORF97416 - 0.11 11.1 2.5 0.13 10.9 2.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A CorA PF01544.18 ORF97416 - 0.15 11.3 2.6 0.18 11.1 2.6 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein KID PF02524.14 ORF97416 - 3.7 8.0 4.8 58 4.5 0.1 3.2 3 0 0 3 3 3 0 KID repeat LSR PF05624.14 ORF95681 - 0.013 15.4 0.4 0.013 15.4 0.4 2.2 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) DUF4969 PF16339.5 ORF95681 - 0.054 13.8 0.3 3.3 8.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4969) Jagunal PF07086.12 ORF95681 - 0.19 11.8 4.8 0.27 11.3 4.8 1.3 1 0 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis CbiQ PF02361.16 ORF95681 - 1.3 8.6 10.0 1.5 8.4 10.0 1.3 1 1 0 1 1 1 0 Cobalt transport protein PRA1 PF03208.19 ORF95514 - 0.052 13.2 11.1 0.071 12.7 11.1 1.2 1 0 0 1 1 1 0 PRA1 family protein FA_desaturase PF00487.24 ORF95514 - 0.24 11.2 4.1 0.3 10.9 4.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase IMS PF00817.20 ORF93413 - 1.1e-12 48.2 0.1 3e-12 46.8 0.0 1.7 2 0 0 2 2 2 1 impB/mucB/samB family Imm71 PF15602.6 ORF93413 - 0.007 16.4 0.4 0.0089 16.1 0.4 1.2 1 0 0 1 1 1 1 Immunity protein 71 NDK PF00334.19 ORF93252 - 2e-53 180.0 0.0 2.2e-53 179.9 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase PSI_PsaJ PF01701.18 ORF93252 - 0.2 12.2 0.0 0.32 11.6 0.0 1.3 1 0 0 1 1 1 0 Photosystem I reaction centre subunit IX / PsaJ MatE PF01554.18 ORF92646 - 0.00016 21.4 6.2 0.00024 20.8 6.2 1.3 1 0 0 1 1 1 1 MatE CSD PF00313.22 ORF92583 - 5.1e-19 67.9 1.3 3.5e-09 36.4 0.1 2.5 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF92583 - 1.3e-05 24.8 0.2 0.091 12.5 0.1 2.5 2 1 0 2 2 2 2 Ribonuclease B OB domain UQ_con PF00179.26 ORF92015 - 5.5e-08 32.6 0.0 7.5e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF92015 - 0.069 12.9 0.0 0.092 12.4 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B UEV PF05743.13 ORF92015 - 0.14 12.0 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 UEV domain TMP_2 PF06791.13 ORF92015 - 0.17 11.5 0.4 0.23 11.1 0.4 1.2 1 0 0 1 1 1 0 Prophage tail length tape measure protein MCM_N PF14551.6 ORF91873 - 0.015 15.9 0.0 0.021 15.4 0.0 1.4 1 1 0 1 1 1 0 MCM N-terminal domain Transferase PF02458.15 ORF91694 - 0.019 13.7 0.1 0.024 13.3 0.1 1.1 1 0 0 1 1 1 0 Transferase family DUF4482 PF14818.6 ORF90168 - 0.01 16.7 6.1 0.013 16.3 6.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4482) MCPVI PF02993.14 ORF90168 - 0.11 12.3 2.4 0.14 12.0 2.4 1.2 1 0 0 1 1 1 0 Minor capsid protein VI DUF2570 PF10828.8 ORF90168 - 0.64 9.9 4.7 1 9.2 4.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) DUF4407 PF14362.6 ORF90168 - 0.95 8.8 3.5 0.97 8.7 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) vATP-synt_E PF01991.18 ORF90168 - 1.5 8.2 11.0 2.2 7.6 11.0 1.2 1 0 0 1 1 1 0 ATP synthase (E/31 kDa) subunit ALMT PF11744.8 ORF90168 - 1.8 7.3 4.7 1.9 7.2 4.7 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter TMPIT PF07851.13 ORF90168 - 2.8 7.1 5.9 3.4 6.8 5.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein Ras PF00071.22 ORF89937 - 2.2e-14 53.4 1.4 2.6e-14 53.2 1.4 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF89937 - 7.9e-09 35.8 0.1 1.6e-08 34.8 0.1 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF89937 - 5.1e-06 26.1 0.5 6.3e-06 25.8 0.5 1.3 1 1 0 1 1 1 1 ADP-ribosylation factor family SAS4 PF15460.6 ORF89937 - 0.066 13.3 0.9 0.096 12.8 0.1 1.7 2 0 0 2 2 2 0 Something about silencing, SAS, complex subunit 4 GAPT PF11770.8 ORF89491 - 0.059 13.2 1.6 0.075 12.9 1.6 1.3 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) Oxysterol_BP PF01237.18 ORF8930 - 2.1e-17 63.0 6.4 2e-08 33.5 0.2 2.0 1 1 1 2 2 2 2 Oxysterol-binding protein TB2_DP1_HVA22 PF03134.19 ORF88551 - 3.8e-26 90.8 4.4 6e-26 90.2 4.4 1.3 1 0 0 1 1 1 1 TB2/DP1, HVA22 family Virul_fac_BrkB PF03631.15 ORF88551 - 0.13 11.8 9.0 0.28 10.8 9.0 1.5 1 1 0 1 1 1 0 Virulence factor BrkB TIC20 PF16166.5 ORF87995 - 0.024 14.4 0.7 0.03 14.1 0.7 1.4 1 1 0 1 1 1 0 Chloroplast import apparatus Tic20-like HTH_Tnp_1 PF01527.20 ORF87416 - 0.064 13.6 0.1 0.12 12.7 0.1 1.6 1 0 0 1 1 1 0 Transposase Dickkopf_N PF04706.12 ORF85149 - 0.38 11.3 2.5 0.84 10.2 0.2 2.1 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region RNase_H PF00075.24 ORF83105 - 2.1e-55 186.8 0.0 2.3e-55 186.7 0.0 1.0 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.6 ORF83105 - 0.028 14.2 0.0 0.041 13.7 0.0 1.3 1 0 0 1 1 1 0 Reverse transcriptase-like PM0188 PF11477.8 ORF83105 - 0.18 11.0 0.0 0.2 10.8 0.0 1.0 1 0 0 1 1 1 0 Sialyltransferase PMO188 Neil1-DNA_bind PF09292.10 ORF82718 - 0.086 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Endonuclease VIII-like 1, DNA bind CSD PF00313.22 ORF80820 - 6.9e-12 45.0 0.0 1e-11 44.5 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF80820 - 0.046 13.4 0.2 0.087 12.5 0.2 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain PsbH PF00737.20 ORF807 - 6.9e-07 28.9 0.4 1.2e-06 28.1 0.4 1.4 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 ORF807 - 0.037 13.7 1.5 0.06 13.1 0.4 1.7 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF807 - 0.058 13.8 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized Ycf70-like CcmF_C PF16327.5 ORF80007 - 0.061 12.6 0.0 0.079 12.2 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c-type biogenesis protein CcmF C-terminal Uroplakin_II PF07353.12 ORF79369 - 0.065 12.7 0.2 0.097 12.2 0.2 1.2 1 0 0 1 1 1 0 Uroplakin II Sporozoite_P67 PF05642.11 ORF77994 - 0.53 8.3 1.2 0.8 7.7 1.2 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF1335 PF07056.11 ORF77409 - 0.21 11.7 0.0 0.29 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1335) DUF16 PF01519.16 ORF76925 - 0.023 15.2 10.6 0.053 14.0 10.5 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 CENP-Q PF13094.6 ORF76925 - 0.42 10.8 10.1 1.4 9.1 2.9 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Fib_alpha PF08702.10 ORF76925 - 5.2 7.3 11.6 1.3 9.2 0.4 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Rad50_zn_hook PF04423.14 ORF76925 - 7.2 6.5 11.5 25 4.8 0.3 3.8 3 0 0 3 3 3 0 Rad50 zinc hook motif PknH_C PF14032.6 ORF7682 - 0.016 15.1 0.2 0.021 14.7 0.2 1.1 1 0 0 1 1 1 0 PknH-like extracellular domain Ank_2 PF12796.7 ORF73290 - 0.0014 19.1 0.2 0.0063 17.1 0.2 2.2 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Hat1_N PF10394.9 ORF73290 - 0.013 15.7 0.3 0.018 15.3 0.3 1.3 1 0 0 1 1 1 0 Histone acetyl transferase HAT1 N-terminus Ank_3 PF13606.6 ORF73290 - 0.051 14.1 0.0 0.99 10.2 0.0 2.5 2 0 0 2 2 2 0 Ankyrin repeat Ank PF00023.30 ORF73290 - 0.17 12.4 0.0 0.66 10.5 0.0 2.1 2 1 0 2 2 2 0 Ankyrin repeat RRF PF01765.19 ORF72436 - 0.25 11.3 11.6 0.36 10.8 11.6 1.2 1 0 0 1 1 1 0 Ribosome recycling factor COQ7 PF03232.13 ORF72436 - 0.78 9.5 2.9 0.32 10.8 0.8 1.4 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 Peptidase_C37 PF05416.12 ORF72436 - 1.4 7.3 8.3 1.5 7.3 8.3 1.0 1 0 0 1 1 1 0 Southampton virus-type processing peptidase DUF4337 PF14235.6 ORF72436 - 4.2 7.5 9.1 6.3 6.9 9.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) LapA_dom PF06305.11 ORF7236 - 0.04 13.7 7.0 0.14 12.0 0.2 3.7 3 1 1 4 4 4 0 Lipopolysaccharide assembly protein A domain Tim17 PF02466.19 ORF7236 - 0.062 13.7 1.8 0.62 10.5 0.9 2.5 2 1 1 3 3 3 0 Tim17/Tim22/Tim23/Pmp24 family PSII PF00421.19 ORF7236 - 0.21 10.2 1.8 0.25 10.0 1.8 1.1 1 0 0 1 1 1 0 Photosystem II protein PhaG_MnhG_YufB PF03334.14 ORF7236 - 4.2 7.7 9.2 15 5.9 9.2 1.9 1 1 0 1 1 1 0 Na+/H+ antiporter subunit DUF2157 PF09925.9 ORF7236 - 4.6 7.0 7.9 11 5.8 7.7 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) CEP44 PF15007.6 ORF71265 - 2.6e-33 114.9 1.3 3.3e-33 114.6 1.3 1.1 1 0 0 1 1 1 1 Centrosomal spindle body, CEP44 Orf78 PF06024.12 ORF71059 - 0.00082 19.6 0.5 0.0012 19.1 0.5 1.2 1 0 0 1 1 1 1 Orf78 (ac78) RIFIN PF02009.16 ORF71059 - 0.0013 18.7 2.5 0.0016 18.4 2.5 1.1 1 0 0 1 1 1 1 Rifin TssO PF17561.2 ORF71059 - 0.0014 18.8 2.0 0.0021 18.2 2.0 1.2 1 0 0 1 1 1 1 Type VI secretion system, TssO 7TM_GPCR_Srsx PF10320.9 ORF71059 - 0.0042 16.5 2.7 0.0056 16.1 2.7 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srsx SieB PF14163.6 ORF71059 - 0.005 16.3 1.4 0.0069 15.9 1.4 1.2 1 0 0 1 1 1 1 Super-infection exclusion protein B Baculo_11_kDa PF06143.11 ORF71059 - 0.0069 15.9 1.3 0.011 15.3 1.3 1.4 1 0 0 1 1 1 1 Baculovirus 11 kDa family Claudin_2 PF13903.6 ORF71059 - 0.0091 15.8 0.1 0.01 15.6 0.1 1.1 1 0 0 1 1 1 1 PMP-22/EMP/MP20/Claudin tight junction Sigma_reg_N PF13800.6 ORF71059 - 0.016 15.5 1.2 0.026 14.8 1.2 1.4 1 0 0 1 1 1 0 Sigma factor regulator N-terminal SUR7 PF06687.12 ORF71059 - 0.017 14.8 0.1 0.019 14.6 0.1 1.2 1 0 0 1 1 1 0 SUR7/PalI family DUF2207 PF09972.9 ORF71059 - 0.018 13.8 0.1 0.022 13.5 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5058 PF16481.5 ORF71059 - 0.019 14.6 0.7 0.026 14.2 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5058) DUF4577 PF15145.6 ORF71059 - 0.023 14.7 0.0 0.033 14.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Tmemb_9 PF05434.11 ORF71059 - 0.039 13.8 0.4 0.052 13.4 0.4 1.1 1 0 0 1 1 1 0 TMEM9 LRR19-TM PF15176.6 ORF71059 - 0.047 13.7 0.6 0.089 12.8 0.6 1.5 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain DUF3377 PF11857.8 ORF71059 - 0.052 13.5 0.2 0.083 12.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) Saf_2TM PF18303.1 ORF71059 - 0.055 13.1 0.2 0.074 12.6 0.2 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain PspB PF06667.12 ORF71059 - 0.056 13.5 0.3 0.086 12.9 0.3 1.3 1 0 0 1 1 1 0 Phage shock protein B TMEM154 PF15102.6 ORF71059 - 0.072 13.0 0.1 0.096 12.6 0.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family LapA_dom PF06305.11 ORF71059 - 0.072 12.9 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Orthoreo_P10 PF07204.11 ORF71059 - 0.074 13.0 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 CD34_antigen PF06365.12 ORF71059 - 0.075 12.6 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 CD34/Podocalyxin family DUF4434 PF14488.6 ORF71059 - 0.082 12.9 0.2 0.11 12.5 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4434) DUF5305 PF17231.2 ORF71059 - 0.087 12.2 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4736 PF15883.5 ORF71059 - 0.098 12.4 0.2 0.14 11.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) MRAP PF15183.6 ORF71059 - 0.1 12.5 3.0 0.18 11.7 3.0 1.5 1 1 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Glycophorin_A PF01102.18 ORF71059 - 0.12 12.6 0.2 0.18 12.0 0.2 1.3 1 0 0 1 1 1 0 Glycophorin A zf-LITAF-like PF10601.9 ORF71059 - 0.13 12.6 1.7 0.19 12.0 1.7 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain DUF5412 PF17428.2 ORF71059 - 0.17 11.7 2.7 0.82 9.5 0.5 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5412) DUF2500 PF10694.9 ORF71059 - 0.31 11.5 3.4 22 5.6 0.6 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2500) YajC PF02699.15 ORF71059 - 1.6 8.6 6.1 4.8 7.1 6.1 1.8 1 1 0 1 1 1 0 Preprotein translocase subunit SieB PF14163.6 ORF70600 - 0.2 11.1 8.3 0.96 8.9 0.9 2.2 1 1 1 2 2 2 0 Super-infection exclusion protein B DHHC PF01529.20 ORF70600 - 0.41 10.8 10.0 0.55 10.3 10.0 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF16 PF01519.16 ORF69953 - 0.023 15.2 10.6 0.053 14.0 10.5 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 CENP-Q PF13094.6 ORF69953 - 0.42 10.8 10.1 1.4 9.1 2.9 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Fib_alpha PF08702.10 ORF69953 - 5.2 7.3 11.6 1.3 9.2 0.4 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Rad50_zn_hook PF04423.14 ORF69953 - 7.2 6.5 11.5 25 4.8 0.3 3.8 3 0 0 3 3 3 0 Rad50 zinc hook motif SIS PF01380.22 ORF69253 - 8e-32 109.9 0.6 9.2e-32 109.6 0.6 1.0 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 ORF69253 - 0.00041 20.4 0.2 0.08 13.0 0.0 2.4 1 1 1 2 2 2 2 SIS domain DnaJ PF00226.31 ORF68550 - 6.3e-10 39.0 0.0 9e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain Tenui_NCP PF04876.12 ORF67375 - 0.2 11.2 0.0 0.28 10.7 0.0 1.2 1 0 0 1 1 1 0 Tenuivirus major non-capsid protein PsbY PF06298.11 ORF66038 - 0.017 15.0 1.3 0.043 13.7 1.3 1.6 1 0 0 1 1 1 0 Photosystem II protein Y (PsbY) CSD PF00313.22 ORF65303 - 6.9e-12 45.0 0.0 1e-11 44.5 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF65303 - 0.046 13.4 0.2 0.087 12.5 0.2 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain MIG-14_Wnt-bd PF06664.12 ORF64511 - 0.59 9.3 5.0 0.75 9.0 5.0 1.1 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion Asp PF00026.23 ORF6436 - 4.2e-11 42.8 0.1 5.3e-11 42.5 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF6436 - 0.00014 21.7 0.0 0.00018 21.3 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Cytokin_check_N PF10407.9 ORF63804 - 9e-10 38.4 0.0 2.2e-09 37.1 0.0 1.6 2 0 0 2 2 2 1 Cdc14 phosphatase binding protein N-terminus DUF997 PF06196.12 ORF63208 - 0.017 15.2 4.5 0.017 15.2 4.5 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF997) Spo7 PF03907.13 ORF63208 - 2.6 7.5 6.4 2.7 7.4 5.7 1.4 1 1 0 1 1 1 0 Spo7-like protein DUF975 PF06161.11 ORF62455 - 0.02 14.7 2.1 0.023 14.5 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF975) DUF4401 PF14351.6 ORF62455 - 0.091 12.1 2.7 0.11 11.7 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4401) DUF4064 PF13273.6 ORF62455 - 0.12 12.7 4.7 0.18 12.1 4.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) EbsA PF17255.2 ORF62455 - 0.28 11.5 5.0 0.4 11.0 5.0 1.2 1 0 0 1 1 1 0 EbsA-like protein Ac81 PF05820.11 ORF62455 - 0.42 10.2 5.6 0.59 9.7 5.6 1.2 1 0 0 1 1 1 0 Baculoviridae AC81 SUR7 PF06687.12 ORF62455 - 0.76 9.4 4.5 1 8.9 4.5 1.1 1 0 0 1 1 1 0 SUR7/PalI family DUF3043 PF11241.8 ORF62455 - 3.5 7.6 4.3 5.4 7.0 4.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) ChapFlgA_N PF17656.1 ORF62132 - 0.079 13.1 0.3 0.18 12.0 0.3 1.5 1 0 0 1 1 1 0 FlgA N-terminal domain Aminotran_1_2 PF00155.21 ORF60003 - 1e-18 67.6 0.0 1.2e-18 67.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II MadL PF03817.13 ORF58915 - 0.063 13.3 0.0 0.09 12.8 0.0 1.2 1 0 0 1 1 1 0 Malonate transporter MadL subunit JLPA PF16668.5 ORF58887 - 0.0018 17.4 0.0 0.0023 17.0 0.0 1.1 1 0 0 1 1 1 1 Adhesin from Campylobacter PRKCSH_1 PF13015.6 ORF57220 - 0.00039 20.1 1.1 0.00052 19.7 1.1 1.2 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein His_kinase PF06580.13 ORF57220 - 0.038 14.3 2.1 0.14 12.5 0.1 2.4 2 2 0 2 2 2 0 Histidine kinase NifU_N PF01592.16 ORF56751 - 1.4e-54 183.6 0.6 1.7e-54 183.4 0.6 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain DegS PF05384.11 ORF56092 - 0.13 11.7 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 Sensor protein DegS DUF726 PF05277.12 ORF55913 - 8.7e-27 93.9 0.9 4.3e-24 85.1 0.9 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF726) UPF0565 PF10561.9 ORF55913 - 0.045 13.0 0.1 0.066 12.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 RNF220 PF15926.5 ORF54792 - 0.018 14.7 2.8 0.033 13.8 2.8 1.6 1 1 0 1 1 1 0 E3 ubiquitin-protein ligase RNF220 Orf78 PF06024.12 ORF53595 - 0.00082 19.6 0.5 0.0012 19.1 0.5 1.2 1 0 0 1 1 1 1 Orf78 (ac78) RIFIN PF02009.16 ORF53595 - 0.0013 18.7 2.5 0.0016 18.4 2.5 1.1 1 0 0 1 1 1 1 Rifin TssO PF17561.2 ORF53595 - 0.0014 18.8 2.0 0.0021 18.2 2.0 1.2 1 0 0 1 1 1 1 Type VI secretion system, TssO 7TM_GPCR_Srsx PF10320.9 ORF53595 - 0.0042 16.5 2.7 0.0056 16.1 2.7 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srsx SieB PF14163.6 ORF53595 - 0.005 16.3 1.4 0.0069 15.9 1.4 1.2 1 0 0 1 1 1 1 Super-infection exclusion protein B Baculo_11_kDa PF06143.11 ORF53595 - 0.0069 15.9 1.3 0.011 15.3 1.3 1.4 1 0 0 1 1 1 1 Baculovirus 11 kDa family Claudin_2 PF13903.6 ORF53595 - 0.0091 15.8 0.1 0.01 15.6 0.1 1.1 1 0 0 1 1 1 1 PMP-22/EMP/MP20/Claudin tight junction Sigma_reg_N PF13800.6 ORF53595 - 0.016 15.5 1.2 0.026 14.8 1.2 1.4 1 0 0 1 1 1 0 Sigma factor regulator N-terminal SUR7 PF06687.12 ORF53595 - 0.017 14.8 0.1 0.019 14.6 0.1 1.2 1 0 0 1 1 1 0 SUR7/PalI family DUF2207 PF09972.9 ORF53595 - 0.018 13.8 0.1 0.022 13.5 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5058 PF16481.5 ORF53595 - 0.019 14.6 0.7 0.026 14.2 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5058) DUF4577 PF15145.6 ORF53595 - 0.023 14.7 0.0 0.033 14.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Tmemb_9 PF05434.11 ORF53595 - 0.039 13.8 0.4 0.052 13.4 0.4 1.1 1 0 0 1 1 1 0 TMEM9 LRR19-TM PF15176.6 ORF53595 - 0.047 13.7 0.6 0.089 12.8 0.6 1.5 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain DUF3377 PF11857.8 ORF53595 - 0.052 13.5 0.2 0.083 12.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) Saf_2TM PF18303.1 ORF53595 - 0.055 13.1 0.2 0.074 12.6 0.2 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain PspB PF06667.12 ORF53595 - 0.056 13.5 0.3 0.086 12.9 0.3 1.3 1 0 0 1 1 1 0 Phage shock protein B TMEM154 PF15102.6 ORF53595 - 0.072 13.0 0.1 0.096 12.6 0.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family LapA_dom PF06305.11 ORF53595 - 0.072 12.9 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Orthoreo_P10 PF07204.11 ORF53595 - 0.074 13.0 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 CD34_antigen PF06365.12 ORF53595 - 0.075 12.6 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 CD34/Podocalyxin family DUF4434 PF14488.6 ORF53595 - 0.082 12.9 0.2 0.11 12.5 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4434) DUF5305 PF17231.2 ORF53595 - 0.087 12.2 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4736 PF15883.5 ORF53595 - 0.098 12.4 0.2 0.14 11.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) MRAP PF15183.6 ORF53595 - 0.1 12.5 3.0 0.18 11.7 3.0 1.5 1 1 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Glycophorin_A PF01102.18 ORF53595 - 0.12 12.6 0.2 0.18 12.0 0.2 1.3 1 0 0 1 1 1 0 Glycophorin A zf-LITAF-like PF10601.9 ORF53595 - 0.13 12.6 1.7 0.19 12.0 1.7 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain DUF5412 PF17428.2 ORF53595 - 0.17 11.7 2.7 0.82 9.5 0.5 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5412) DUF2500 PF10694.9 ORF53595 - 0.31 11.5 3.4 22 5.6 0.6 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2500) YajC PF02699.15 ORF53595 - 1.6 8.6 6.1 4.8 7.1 6.1 1.8 1 1 0 1 1 1 0 Preprotein translocase subunit Gelsolin PF00626.22 ORF53261 - 6.6e-08 32.3 0.2 3e-07 30.2 0.1 2.1 2 1 0 2 2 2 1 Gelsolin repeat CTP_transf_like PF01467.26 ORF53007 - 0.0075 16.5 2.5 0.0095 16.1 2.2 1.3 1 1 0 1 1 1 1 Cytidylyltransferase-like PDZ_2 PF13180.6 ORF53007 - 0.084 13.2 0.9 0.24 11.7 0.3 2.0 1 1 1 2 2 2 0 PDZ domain DUF86 PF01934.17 ORF53007 - 0.15 12.0 3.6 0.097 12.5 1.2 2.0 2 1 0 2 2 2 0 Protein of unknown function DUF86 ApoA-II PF04711.13 ORF53007 - 0.55 10.4 7.1 0.4 10.9 4.3 2.0 1 1 1 2 2 2 0 Apolipoprotein A-II (ApoA-II) EF-hand_7 PF13499.6 ORF52868 - 4e-08 33.6 7.2 4.2e-07 30.3 3.3 1.7 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF52868 - 7.1e-08 31.8 1.8 0.00034 20.3 0.3 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF52868 - 3e-07 30.2 0.8 0.0002 21.1 0.5 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF52868 - 1.9e-05 23.9 8.3 0.00072 18.9 0.4 2.7 3 0 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF52868 - 0.029 14.7 0.9 0.048 14.0 0.8 1.5 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region TFIIF_beta_N PF17683.1 ORF52449 - 0.033 14.9 0.9 0.045 14.4 0.9 1.2 1 0 0 1 1 1 0 TFIIF, beta subunit N-terminus T2SSB PF16537.5 ORF52449 - 0.044 13.4 0.1 0.08 12.6 0.1 1.4 1 0 0 1 1 1 0 Type II secretion system protein B TB2_DP1_HVA22 PF03134.19 ORF52327 - 3.8e-26 90.8 4.4 6e-26 90.2 4.4 1.3 1 0 0 1 1 1 1 TB2/DP1, HVA22 family Virul_fac_BrkB PF03631.15 ORF52327 - 0.13 11.8 9.0 0.28 10.8 9.0 1.5 1 1 0 1 1 1 0 Virulence factor BrkB ChapFlgA_N PF17656.1 ORF50246 - 0.079 13.1 0.3 0.18 12.0 0.3 1.5 1 0 0 1 1 1 0 FlgA N-terminal domain PRA-PH PF01503.17 ORF48678 - 7e-15 55.2 0.0 9.4e-15 54.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 ORF48678 - 0.0051 17.0 0.0 0.0077 16.4 0.0 1.3 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain DmpG_comm PF07836.11 ORF48678 - 0.057 13.0 0.1 0.31 10.6 0.0 2.0 2 0 0 2 2 2 0 DmpG-like communication domain DDDD PF10161.9 ORF46092 - 0.077 12.8 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Putative mitochondrial precursor protein TP2 PF01254.18 ORF46090 - 2.5 8.7 5.6 1.7 9.3 3.8 1.6 2 0 0 2 2 2 0 Nuclear transition protein 2 Prefoldin PF02996.17 ORF46020 - 4.5e-26 91.1 1.6 6.1e-26 90.7 1.6 1.2 1 0 0 1 1 1 1 Prefoldin subunit UPF0449 PF15136.6 ORF46020 - 0.065 13.7 1.9 5.8 7.5 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0449 GIT_CC PF16559.5 ORF46020 - 0.25 11.2 9.3 0.32 10.9 5.0 2.3 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor WXG100 PF06013.12 ORF46020 - 0.27 11.5 5.3 12 6.2 0.0 2.8 2 1 1 3 3 3 0 Proteins of 100 residues with WXG MRF_C2 PF13888.6 ORF45609 - 0.086 12.7 0.2 0.15 12.0 0.2 1.4 1 1 0 1 1 1 0 Myelin gene regulatory factor C-terminal domain 2 JLPA PF16668.5 ORF435 - 0.0018 17.4 0.0 0.0023 17.0 0.0 1.1 1 0 0 1 1 1 1 Adhesin from Campylobacter GRA6 PF05084.13 ORF43446 - 0.1 12.5 2.7 0.12 12.3 2.7 1.1 1 0 0 1 1 1 0 Granule antigen protein (GRA6) Zip PF02535.22 ORF43446 - 0.2 10.8 3.8 0.22 10.7 3.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter FYDLN_acid PF09538.10 ORF43446 - 0.27 11.9 7.6 0.48 11.1 7.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) Presenilin PF01080.17 ORF43446 - 7.8 5.2 5.6 8.4 5.0 5.6 1.2 1 0 0 1 1 1 0 Presenilin Sec1 PF00995.23 ORF41794 - 1.6e-20 73.9 0.1 1.7e-20 73.8 0.1 1.0 1 0 0 1 1 1 1 Sec1 family PPR_2 PF13041.6 ORF38759 - 1.2e-09 38.2 0.0 0.00053 20.1 0.0 2.3 2 0 0 2 2 2 2 PPR repeat family PPR PF01535.20 ORF38759 - 2.7e-06 27.3 0.1 1.2 9.5 0.0 3.9 4 0 0 4 4 4 3 PPR repeat PPR_3 PF13812.6 ORF38759 - 0.0076 16.3 0.0 0.3 11.2 0.0 2.7 1 1 2 3 3 3 2 Pentatricopeptide repeat domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks142.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks142.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks142.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks142.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Orf78 PF06024.12 ORF38182 - 0.65 10.3 3.0 3 8.2 3.0 2.0 1 1 0 1 1 1 0 Orf78 (ac78) Trans_reg_C PF00486.28 ORF37553 - 4.6e-22 77.9 0.3 3e-21 75.3 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Aminotran_3 PF00202.21 ORF37553 - 0.093 11.4 0.0 0.11 11.2 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-III Octopine_DH PF02317.17 ORF37410 - 1.1e-24 87.2 0.0 1.3e-24 87.0 0.0 1.1 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Ribosomal_S3_C PF00189.20 ORF37410 - 0.097 13.2 0.0 0.19 12.3 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain DUF16 PF01519.16 ORF36812 - 0.023 15.2 10.6 0.053 14.0 10.5 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 CENP-Q PF13094.6 ORF36812 - 0.42 10.8 10.1 1.4 9.1 2.9 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Fib_alpha PF08702.10 ORF36812 - 5.2 7.3 11.6 1.3 9.2 0.4 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Rad50_zn_hook PF04423.14 ORF36812 - 7.2 6.5 11.5 25 4.8 0.3 3.8 3 0 0 3 3 3 0 Rad50 zinc hook motif AMP-binding PF00501.28 ORF36501 - 9.3e-11 41.0 0.7 1.4e-10 40.3 0.7 1.3 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 ORF36501 - 6.1e-06 26.5 0.0 9.2e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF386 PF04074.12 ORF35275 - 1.4e-42 145.1 0.0 1.5e-42 145.0 0.0 1.0 1 0 0 1 1 1 1 YhcH/YjgK/YiaL DUF1889 PF08986.10 ORF35275 - 0.059 13.8 0.0 0.09 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) DUF3624 PF12292.8 ORF33213 - 0.0023 18.3 4.3 0.0058 17.0 4.3 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3624) PTPS_related PF10131.9 ORF33213 - 0.045 12.1 8.6 0.048 12.0 8.6 1.1 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein E7 PF00527.18 ORF33213 - 1.1 9.5 4.1 2.7 8.2 4.1 1.6 1 1 0 1 1 1 0 E7 protein, Early protein DUF4418 PF14387.6 ORF33213 - 1.5 9.0 13.7 0.21 11.8 8.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4418) TrbC PF04956.13 ORF33085 - 0.043 14.0 1.0 0.043 14.0 1.0 2.2 1 1 1 2 2 2 0 TrbC/VIRB2 family DUF1176 PF06674.11 ORF33085 - 0.088 12.2 1.7 0.1 12.0 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1176) Tape_meas_lam_C PF09718.10 ORF33085 - 0.5 10.5 8.3 0.076 13.1 3.5 1.9 2 0 0 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) CBFD_NFYB_HMF PF00808.23 ORF32430 - 9.7e-09 35.4 2.1 1.9e-08 34.5 0.1 2.3 2 1 1 3 3 3 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAFII28 PF04719.14 ORF32430 - 0.016 15.3 0.1 0.027 14.5 0.1 1.5 1 1 0 1 1 1 0 hTAFII28-like protein conserved region Abhydrolase_1 PF00561.20 ORF32398 - 0.027 14.1 0.0 0.043 13.5 0.0 1.4 2 0 0 2 2 2 0 alpha/beta hydrolase fold Dickkopf_N PF04706.12 ORF31122 - 0.38 11.3 2.5 0.84 10.2 0.2 2.1 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region ComFB PF10719.9 ORF30499 - 0.044 13.9 0.1 0.084 13.0 0.1 1.5 1 0 0 1 1 1 0 Late competence development protein ComFB YodL PF14191.6 ORF30230 - 0.0081 17.0 1.0 0.017 16.0 0.7 1.7 1 1 1 2 2 2 1 YodL-like MaoC_dehydratas PF01575.19 ORF28710 - 1.2e-18 66.9 0.0 1.7e-18 66.4 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain DUF1589 PF07628.11 ORF28710 - 0.15 12.2 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1589) Arteri_nsp7a PF16749.5 ORF27504 - 0.0048 17.1 0.0 0.0083 16.3 0.0 1.6 1 1 0 1 1 1 1 Arterivirus nonstructural protein 7 alpha DUF1298 PF06974.13 ORF2698 - 2.3e-10 40.6 0.0 3e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) SNARE_assoc PF09335.11 ORF26826 - 2.1e-09 37.9 2.4 2.1e-09 37.9 2.4 1.4 2 0 0 2 2 2 1 SNARE associated Golgi protein WD40 PF00400.32 ORF25439 - 0.0012 19.6 0.0 2.4 9.1 0.1 2.3 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF4389 PF14333.6 ORF24579 - 0.023 14.6 0.7 0.036 14.0 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4389) SID-1_RNA_chan PF13965.6 ORF24474 - 5.7e-16 58.1 1.7 6.6e-16 57.9 1.7 1.2 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 HCO3_cotransp PF00955.21 ORF24474 - 0.0043 15.9 2.0 0.0052 15.7 2.0 1.0 1 0 0 1 1 1 1 HCO3- transporter family DUF2298 PF10060.9 ORF24474 - 0.083 11.6 5.1 0.051 12.3 0.9 1.9 1 1 1 2 2 2 0 Uncharacterized membrane protein (DUF2298) TPR_19 PF14559.6 ORF23016 - 1.2e-07 32.1 1.0 1.2e-07 32.1 1.0 2.8 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF23016 - 5.2e-05 23.0 5.7 0.66 10.2 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF23016 - 0.00034 20.3 0.1 1 9.3 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF23016 - 0.0054 17.4 7.5 0.0054 17.4 7.5 2.1 2 1 0 2 2 2 1 Tetratricopeptide repeat ATG16 PF08614.11 ORF23016 - 0.043 14.1 3.5 0.071 13.3 3.5 1.4 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Fis1_TPR_C PF14853.6 ORF23016 - 0.067 13.3 0.1 7 6.8 0.1 2.6 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_4 PF07721.14 ORF23016 - 0.073 13.7 1.6 0.073 13.7 1.6 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF23016 - 0.085 13.7 13.3 0.41 11.6 2.9 3.4 2 1 1 3 3 3 0 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 ORF23016 - 0.12 12.8 0.3 0.2 12.1 0.2 1.5 1 1 0 1 1 1 0 Alkyl sulfatase dimerisation TPR_12 PF13424.6 ORF23016 - 0.12 12.6 6.6 0.14 12.4 2.0 2.9 1 1 3 4 4 4 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF23016 - 0.19 12.2 1.2 9.6 6.8 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF23016 - 0.24 11.6 11.1 0.075 13.2 6.8 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF23016 - 3.4 8.1 10.3 0.23 11.8 1.8 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat FRQ PF09421.10 ORF22345 - 0.016 13.3 3.7 0.018 13.1 3.7 1.0 1 0 0 1 1 1 0 Frequency clock protein Voldacs PF03517.13 ORF22345 - 0.033 14.3 5.5 0.045 13.9 5.5 1.3 1 0 0 1 1 1 0 Regulator of volume decrease after cellular swelling Presenilin PF01080.17 ORF22345 - 1.2 7.8 5.8 1.5 7.5 5.8 1.2 1 0 0 1 1 1 0 Presenilin E1_dh PF00676.20 ORF22169 - 5.7e-40 137.1 0.4 6.1e-40 137.0 0.4 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component Mito_carr PF00153.27 ORF21811 - 1.9e-13 50.1 0.1 2.6e-13 49.7 0.1 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein Multi_ubiq PF14452.6 ORF19928 - 0.073 13.3 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Multiubiquitin SUR7 PF06687.12 ORF19613 - 2.6 7.6 16.4 1.4 8.4 14.8 1.3 2 0 0 2 2 2 0 SUR7/PalI family Multi_ubiq PF14452.6 ORF18351 - 0.073 13.3 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Multiubiquitin GST_C_3 PF14497.6 ORF17840 - 3.6e-06 27.1 0.0 1e-05 25.6 0.0 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain CoA_binding_2 PF13380.6 ORF16218 - 6.1e-39 133.1 0.1 7.8e-39 132.8 0.1 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 ORF16218 - 1.2e-05 25.9 0.0 2.3e-05 25.0 0.0 1.5 2 0 0 2 2 2 1 CoA binding domain DUF4839 PF16127.5 ORF15845 - 0.052 13.6 0.1 0.36 10.9 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4839) ALG11_N PF15924.5 ORF15561 - 0.049 13.7 0.0 0.054 13.5 0.0 1.1 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus PAG PF15347.6 ORF12437 - 0.033 13.2 5.2 0.038 13.0 5.2 1.0 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched U-box PF04564.15 ORF11999 - 8.2e-10 38.7 0.0 1.3e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF11999 - 0.00067 19.7 0.0 0.0014 18.8 0.0 1.5 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein WD40 PF00400.32 ORF11625 - 2.7e-20 72.3 0.0 2.5e-05 24.9 0.1 4.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF11625 - 7.4e-08 32.6 0.5 5.2e-06 26.7 0.1 3.0 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain PLAT PF01477.23 ORF112438 - 5.7e-07 30.1 0.0 6.8e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 PLAT/LH2 domain DUF4235 PF14019.6 ORF111119 - 0.11 12.6 2.3 0.45 10.6 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4235) Gp_dh_C PF02800.20 ORF111077 - 4.6e-44 149.8 0.1 5.3e-44 149.6 0.1 1.0 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Asp23 PF03780.13 ORF111077 - 0.068 13.6 0.0 0.098 13.1 0.0 1.2 1 0 0 1 1 1 0 Asp23 family, cell envelope-related function ChapFlgA_N PF17656.1 ORF110554 - 0.079 13.1 0.3 0.18 12.0 0.3 1.5 1 0 0 1 1 1 0 FlgA N-terminal domain POT1 PF02765.17 ORF110378 - 0.0022 17.8 0.7 0.0028 17.5 0.7 1.1 1 0 0 1 1 1 1 Telomeric single stranded DNA binding POT1/CDC13 IGFL PF14653.6 ORF110169 - 0.0074 16.2 6.7 0.0074 16.2 6.7 3.0 1 1 2 3 3 3 2 Insulin growth factor-like family UPF0054 PF02130.17 ORF109426 - 2.3e-39 134.1 0.0 2.7e-39 133.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0054 DDE_1 PF03184.19 ORF109426 - 0.12 12.0 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 DDE superfamily endonuclease ChapFlgA_N PF17656.1 ORF1088 - 0.079 13.1 0.3 0.18 12.0 0.3 1.5 1 0 0 1 1 1 0 FlgA N-terminal domain CoA_binding_3 PF13727.6 ORF106696 - 0.092 12.8 0.6 0.12 12.3 0.6 1.1 1 0 0 1 1 1 0 CoA-binding domain ELP6 PF09807.9 ORF106696 - 0.15 11.5 0.0 0.23 10.8 0.0 1.3 1 0 0 1 1 1 0 Elongation complex protein 6 PDZ PF00595.24 ORF106646 - 0.035 14.4 0.0 0.06 13.7 0.0 1.4 1 0 0 1 1 1 0 PDZ domain Orf78 PF06024.12 ORF106470 - 0.00084 19.6 0.5 0.0012 19.1 0.5 1.2 1 0 0 1 1 1 1 Orf78 (ac78) RIFIN PF02009.16 ORF106470 - 0.0013 18.7 2.5 0.0016 18.4 2.5 1.1 1 0 0 1 1 1 1 Rifin TssO PF17561.2 ORF106470 - 0.0014 18.8 2.0 0.0021 18.2 2.0 1.2 1 0 0 1 1 1 1 Type VI secretion system, TssO 7TM_GPCR_Srsx PF10320.9 ORF106470 - 0.0041 16.5 2.7 0.0056 16.1 2.7 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srsx SieB PF14163.6 ORF106470 - 0.0051 16.3 1.4 0.0069 15.9 1.4 1.2 1 0 0 1 1 1 1 Super-infection exclusion protein B Baculo_11_kDa PF06143.11 ORF106470 - 0.0069 15.9 1.3 0.011 15.3 1.3 1.4 1 0 0 1 1 1 1 Baculovirus 11 kDa family Claudin_2 PF13903.6 ORF106470 - 0.0089 15.8 0.1 0.0098 15.7 0.1 1.1 1 0 0 1 1 1 1 PMP-22/EMP/MP20/Claudin tight junction DUF2207 PF09972.9 ORF106470 - 0.012 14.4 0.1 0.015 14.1 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) SUR7 PF06687.12 ORF106470 - 0.015 14.9 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 SUR7/PalI family Sigma_reg_N PF13800.6 ORF106470 - 0.016 15.4 1.2 0.026 14.8 1.2 1.3 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF5058 PF16481.5 ORF106470 - 0.019 14.6 0.7 0.026 14.2 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5058) DUF4577 PF15145.6 ORF106470 - 0.024 14.7 0.0 0.034 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Tmemb_9 PF05434.11 ORF106470 - 0.039 13.8 0.4 0.052 13.4 0.4 1.1 1 0 0 1 1 1 0 TMEM9 DUF3377 PF11857.8 ORF106470 - 0.052 13.5 0.2 0.083 12.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) LRR19-TM PF15176.6 ORF106470 - 0.053 13.5 0.6 0.089 12.8 0.6 1.4 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Saf_2TM PF18303.1 ORF106470 - 0.055 13.1 0.2 0.074 12.6 0.2 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain PspB PF06667.12 ORF106470 - 0.056 13.5 0.3 0.086 12.9 0.3 1.3 1 0 0 1 1 1 0 Phage shock protein B TMEM154 PF15102.6 ORF106470 - 0.071 13.0 0.1 0.096 12.6 0.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family CD34_antigen PF06365.12 ORF106470 - 0.072 12.7 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 CD34/Podocalyxin family LapA_dom PF06305.11 ORF106470 - 0.073 12.9 0.2 0.11 12.3 0.2 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Orthoreo_P10 PF07204.11 ORF106470 - 0.074 13.0 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DUF4434 PF14488.6 ORF106470 - 0.088 12.8 0.2 0.12 12.4 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4434) DUF5305 PF17231.2 ORF106470 - 0.094 12.1 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4736 PF15883.5 ORF106470 - 0.1 12.3 0.2 0.14 11.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) MRAP PF15183.6 ORF106470 - 0.1 12.6 3.0 0.18 11.7 3.0 1.5 1 1 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Glycophorin_A PF01102.18 ORF106470 - 0.12 12.6 0.2 0.18 12.0 0.2 1.3 1 0 0 1 1 1 0 Glycophorin A zf-LITAF-like PF10601.9 ORF106470 - 0.13 12.6 1.7 0.19 12.0 1.7 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Shisa PF13908.6 ORF106470 - 0.28 11.4 0.3 0.37 11.0 0.3 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF2500 PF10694.9 ORF106470 - 0.42 11.1 3.2 22 5.6 0.6 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2500) YajC PF02699.15 ORF106470 - 1.7 8.6 6.1 4.8 7.1 6.1 1.8 1 1 0 1 1 1 0 Preprotein translocase subunit Pkinase PF00069.25 ORF104471 - 9.6e-21 74.3 0.5 1.1e-20 74.1 0.1 1.3 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF104471 - 8e-14 51.5 0.0 1.1e-13 51.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase PKHD_C PF18331.1 ORF104471 - 0.1 12.7 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 PKHD-type hydroxylase C-terminal domain ChapFlgA_N PF17656.1 ORF102939 - 0.079 13.1 0.3 0.18 12.0 0.3 1.5 1 0 0 1 1 1 0 FlgA N-terminal domain HGTP_anticodon2 PF12745.7 ORF10162 - 0.13 11.8 0.7 0.16 11.5 0.7 1.1 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs Cwf_Cwc_15 PF04889.12 ORF101392 - 0.21 11.3 14.6 0.23 11.2 14.6 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein tRNA_lig_CPD PF08302.11 ORF101392 - 0.47 9.8 6.4 0.35 10.3 3.1 1.9 1 1 1 2 2 2 0 Fungal tRNA ligase phosphodiesterase domain SecB PF02556.14 ORF100971 - 9.8e-58 194.1 0.1 1.2e-57 193.8 0.1 1.0 1 0 0 1 1 1 1 Preprotein translocase subunit SecB Cyclin PF08613.11 ORF100752 - 4.7e-17 62.8 0.1 6.2e-17 62.4 0.1 1.2 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF100752 - 1.3e-07 31.4 0.0 1.8e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Cyclin, N-terminal domain cNMP_binding PF00027.29 NODE_43589_length_460_cov_2.004706_g35899_i0reverse_frame_1 - 4.8e-09 36.2 0.0 7.7e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain ABC_tran PF00005.27 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 1e-08 35.8 3.5 2.2e-08 34.7 3.5 1.6 1 1 0 1 1 1 1 ABC transporter Dynamin_N PF00350.23 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 1.9e-05 24.8 0.2 3.3e-05 24.0 0.2 1.5 1 0 0 1 1 1 1 Dynamin family Septin PF00735.18 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.00042 19.7 0.9 0.0015 17.9 0.9 1.8 1 1 0 1 1 1 1 Septin RsgA_GTPase PF03193.16 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.0013 18.6 1.3 0.0017 18.3 0.6 1.4 1 1 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.0028 17.1 1.1 0.0034 16.9 1.1 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.003 17.6 0.3 0.0066 16.5 0.2 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF3987 PF13148.6 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.0035 16.4 0.0 0.0041 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3987) DUF2813 PF11398.8 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.0047 16.2 0.0 0.0061 15.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) AAA_7 PF12775.7 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.0061 16.1 0.3 0.0085 15.6 0.3 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_29 PF13555.6 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.011 15.5 0.1 0.022 14.5 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.019 15.2 0.1 0.032 14.5 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.021 15.2 0.1 0.033 14.6 0.1 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) GTP_EFTU PF00009.27 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.026 14.1 0.1 0.042 13.4 0.1 1.4 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Roc PF08477.13 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.03 14.5 0.1 0.053 13.7 0.1 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.06 13.7 0.1 0.081 13.3 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.098 12.7 0.2 0.17 11.9 0.1 1.4 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.12 11.9 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain RMI2 PF16100.5 NODE_43587_length_460_cov_2.124706_g35897_i0reverse_frame_1 - 0.13 12.1 0.3 0.35 10.7 0.2 1.7 1 1 1 2 2 2 0 RecQ-mediated genome instability protein 2 DUF1127 PF06568.11 NODE_43583_length_460_cov_2.442353_g35893_i0forward_frame_1 - 2.1e-13 49.7 8.1 3.3e-13 49.1 8.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) Spore_II_R PF09551.10 NODE_43582_length_460_cov_3.265882_g35892_i0forward_frame_1 - 0.4 11.2 2.7 0.69 10.4 2.7 1.4 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) RabGAP-TBC PF00566.18 NODE_43582_length_460_cov_3.265882_g35892_i0forward_frame_1 - 4.5 6.9 7.4 10 5.7 2.8 2.0 2 0 0 2 2 2 0 Rab-GTPase-TBC domain Chlam_OMP3 PF03503.13 NODE_43580_length_460_cov_3.320000_g35890_i0reverse_frame_1 - 0.38 11.1 5.9 0.62 10.4 5.9 1.3 1 0 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 3 E1-E2_ATPase PF00122.20 NODE_43579_length_460_cov_3.414118_g35889_i0forward_frame_1 - 8.1e-07 28.7 0.7 1.1e-06 28.4 0.7 1.2 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 NODE_43579_length_460_cov_3.414118_g35889_i0forward_frame_1 - 0.031 14.5 0.0 0.039 14.2 0.0 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase NNMT_PNMT_TEMT PF01234.17 NODE_43577_length_460_cov_4.988235_g35887_i0reverse_frame_1 - 0.084 12.1 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family ComFB PF10719.9 NODE_43564_length_460_cov_93.223529_g35874_i0forward_frame_1 - 0.18 11.9 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Late competence development protein ComFB UCH PF00443.29 NODE_43555_length_460_cov_138.256471_g35865_i0reverse_frame_1 - 0.00022 20.8 0.2 0.00031 20.3 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Exo_endo_phos_2 PF14529.6 NODE_43525_length_461_cov_2.762911_g35839_i0forward_frame_1 - 0.0013 18.6 0.0 0.0023 17.8 0.0 1.4 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase Exo_endo_phos PF03372.23 NODE_43525_length_461_cov_2.762911_g35839_i0forward_frame_1 - 0.09 12.3 0.0 0.18 11.3 0.0 1.3 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family RICTOR_M PF14666.6 NODE_43524_length_461_cov_2.877934_g35838_i0forward_frame_1 - 0.019 14.7 0.3 0.028 14.2 0.3 1.3 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain BPD_transp_1 PF00528.22 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 1.9e-09 37.5 5.1 2.8e-09 37.0 5.1 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SyrA PF11089.8 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 0.018 15.1 0.3 0.047 13.8 0.3 1.7 1 0 0 1 1 1 0 Exopolysaccharide production repressor Trep_Strep PF09605.10 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 0.038 14.0 7.3 0.048 13.6 7.3 1.1 1 0 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) MotA_ExbB PF01618.16 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 0.067 12.9 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family FtsX PF02687.21 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 0.41 11.1 10.7 0.52 10.8 9.2 1.9 2 1 0 2 2 2 0 FtsX-like permease family UCH PF00443.29 NODE_43519_length_461_cov_5.204225_g35833_i0forward_frame_1 - 6.9e-05 22.5 0.0 8.2e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PsiB PF06290.11 NODE_43519_length_461_cov_5.204225_g35833_i0forward_frame_1 - 0.041 13.4 1.1 2.2 7.7 0.1 2.1 1 1 1 2 2 2 0 Plasmid SOS inhibition protein (PsiB) ATX_III PF08098.11 NODE_43515_length_461_cov_63.899061_g35830_i0forward_frame_1 - 0.011 15.8 2.9 0.029 14.4 2.9 1.7 1 0 0 1 1 1 0 Anemonia sulcata toxin III family bPH_3 PF14470.6 NODE_43513_length_461_cov_71.014085_g35828_i0forward_frame_1 - 0.0025 18.1 0.1 0.0041 17.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial PH domain MAAL_C PF07476.11 NODE_43513_length_461_cov_71.014085_g35828_i0forward_frame_1 - 0.063 12.4 0.0 0.16 11.1 0.0 1.6 2 0 0 2 2 2 0 Methylaspartate ammonia-lyase C-terminus LacY_symp PF01306.19 NODE_43481_length_461_cov_457.485915_g35797_i0reverse_frame_1 - 0.025 13.4 1.3 0.038 12.8 1.3 1.3 1 0 0 1 1 1 0 LacY proton/sugar symporter zf-LITAF-like PF10601.9 NODE_43479_length_461_cov_1534.969484_g35795_i0reverse_frame_1 - 2.2e-13 50.3 17.4 2.2e-13 50.3 17.4 1.6 2 0 0 2 2 2 1 LITAF-like zinc ribbon domain SCAMP PF04144.13 NODE_43479_length_461_cov_1534.969484_g35795_i0reverse_frame_1 - 1.3 9.3 9.9 0.063 13.6 1.7 2.0 2 0 0 2 2 2 0 SCAMP family Wzy_C PF04932.15 NODE_43471_length_462_cov_1.906323_g35789_i0forward_frame_1 - 0.026 14.2 0.0 0.029 14.0 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUSP PF06337.12 NODE_43469_length_462_cov_2.213115_g35787_i0forward_frame_1 - 0.0015 19.1 1.2 0.0026 18.3 1.2 1.5 1 0 0 1 1 1 1 DUSP domain Seryl_tRNA_N PF02403.22 NODE_43449_length_462_cov_80.613583_g35767_i0forward_frame_1 - 0.05 13.8 1.2 0.05 13.8 1.2 1.8 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF4407 PF14362.6 NODE_43449_length_462_cov_80.613583_g35767_i0forward_frame_1 - 0.077 12.3 5.6 0.084 12.2 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Hep_core_N PF08290.11 NODE_43435_length_462_cov_142.669789_g35753_i0reverse_frame_1 - 0.13 12.3 0.6 0.31 11.1 0.6 1.7 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger U79_P34 PF03064.16 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 0.12 11.7 13.2 0.15 11.4 13.2 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 ATP-synt_E PF05680.12 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 3.4 8.1 8.7 2.3 8.6 6.6 1.7 2 0 0 2 2 2 0 ATP synthase E chain DDRGK PF09756.9 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 4.9 6.7 18.4 8.7 5.9 18.4 1.3 1 0 0 1 1 1 0 DDRGK domain EMC3_TMCO1 PF01956.16 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 5.6 6.7 5.3 7.6 6.2 5.3 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like TT_ORF1 PF02956.14 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 6.7 5.3 11.5 11 4.5 11.5 1.4 1 0 0 1 1 1 0 TT viral orf 1 CSRNP_N PF16019.5 NODE_43428_length_462_cov_176.400468_g35747_i0reverse_frame_1 - 0.18 11.7 3.9 0.22 11.4 3.9 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Microtub_bind PF13931.6 NODE_43425_length_462_cov_188.512881_g35744_i0reverse_frame_1 - 0.016 15.5 5.4 0.024 15.0 5.4 1.4 1 0 0 1 1 1 0 Kinesin-associated microtubule-binding 7TM_transglut PF14402.6 NODE_43413_length_462_cov_1745.316159_g35732_i0forward_frame_1 - 0.0068 15.9 3.1 0.014 14.9 0.9 1.9 1 1 1 2 2 2 1 7 transmembrane helices usually fused to an inactive transglutaminase AA_permease_2 PF13520.6 NODE_43394_length_463_cov_2.542056_g35714_i0forward_frame_3 - 1e-10 41.0 2.7 1.2e-10 40.8 2.7 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 NODE_43394_length_463_cov_2.542056_g35714_i0forward_frame_3 - 3e-09 36.0 2.8 3.2e-09 35.9 2.8 1.0 1 0 0 1 1 1 1 Amino acid permease PX PF00787.24 NODE_43392_length_463_cov_2.978972_g35712_i0forward_frame_3 - 2.4e-15 56.5 0.2 6.9e-15 55.0 0.0 1.7 2 0 0 2 2 2 1 PX domain Kelch_6 PF13964.6 NODE_43391_length_463_cov_3.147196_g35711_i0reverse_frame_3 - 1.8e-12 47.1 2.3 2.2e-07 30.9 0.0 3.3 3 0 0 3 3 3 3 Kelch motif Kelch_1 PF01344.25 NODE_43391_length_463_cov_3.147196_g35711_i0reverse_frame_3 - 6.4e-12 44.9 5.4 9.8e-08 31.5 0.1 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_4 PF13418.6 NODE_43391_length_463_cov_3.147196_g35711_i0reverse_frame_3 - 6.5e-10 38.9 5.8 1.3e-08 34.7 0.0 3.0 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_43391_length_463_cov_3.147196_g35711_i0reverse_frame_3 - 5.3e-09 35.7 3.7 2.7e-05 24.0 0.2 3.2 2 1 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 NODE_43391_length_463_cov_3.147196_g35711_i0reverse_frame_3 - 2.2e-08 33.9 3.2 0.0019 18.1 0.3 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_43391_length_463_cov_3.147196_g35711_i0reverse_frame_3 - 2.1e-07 31.1 3.1 1.7e-06 28.1 0.0 3.0 3 0 0 3 3 3 1 Galactose oxidase, central domain SSP160 PF06933.11 NODE_43390_length_463_cov_3.385514_g35710_i0reverse_frame_3 - 0.91 7.6 21.7 1.2 7.3 21.7 1.4 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 HTH_1 PF00126.27 NODE_43387_length_463_cov_3.862150_g35707_i0forward_frame_3 - 8.1e-19 67.3 0.0 1.4e-18 66.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family WASH_WAHD PF11945.8 NODE_43381_length_463_cov_62.299065_g35701_i0reverse_frame_2 - 0.067 12.7 4.2 2.5 7.6 0.0 2.0 1 1 1 2 2 2 0 WAHD domain of WASH complex Snapin_Pallidin PF14712.6 NODE_43381_length_463_cov_62.299065_g35701_i0reverse_frame_2 - 0.14 12.6 2.4 0.29 11.6 2.4 1.6 1 1 0 1 1 1 0 Snapin/Pallidin Fib_alpha PF08702.10 NODE_43381_length_463_cov_62.299065_g35701_i0reverse_frame_2 - 0.35 11.1 4.5 0.46 10.7 4.3 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Scaffolding_pro PF11418.8 NODE_43380_length_463_cov_62.485981_g35700_i0reverse_frame_3 - 0.014 15.9 1.0 0.026 15.1 0.5 1.7 2 0 0 2 2 2 0 Phi29 scaffolding protein Fzo_mitofusin PF04799.13 NODE_43378_length_463_cov_70.787383_g35698_i0reverse_frame_2 - 0.2 11.2 4.6 0.15 11.6 3.1 1.6 1 1 1 2 2 2 0 fzo-like conserved region COG2 PF06148.11 NODE_43378_length_463_cov_70.787383_g35698_i0reverse_frame_2 - 0.41 10.7 6.8 0.062 13.4 1.7 1.9 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 LsmAD PF06741.13 NODE_43378_length_463_cov_70.787383_g35698_i0reverse_frame_2 - 3.5 8.3 8.9 1.1 9.9 0.5 2.4 1 1 1 2 2 2 0 LsmAD domain VPS13_mid_rpt PF16910.5 NODE_43376_length_463_cov_86.418224_g35696_i0reverse_frame_2 - 0.042 13.3 0.5 0.058 12.8 0.5 1.3 1 0 0 1 1 1 0 Repeating coiled region of VPS13 FidL_like PF15941.5 NODE_43376_length_463_cov_86.418224_g35696_i0reverse_frame_2 - 0.69 10.4 5.8 0.62 10.6 0.7 2.3 1 1 1 2 2 2 0 FidL-like putative membrane protein 7tm_2 PF00002.24 NODE_43371_length_463_cov_99.233645_g35691_i0reverse_frame_2 - 0.031 13.6 1.3 0.031 13.6 1.3 1.4 2 0 0 2 2 2 0 7 transmembrane receptor (Secretin family) YpmT PF17431.2 NODE_43371_length_463_cov_99.233645_g35691_i0reverse_frame_2 - 0.1 12.7 0.9 0.17 11.9 0.9 1.3 1 0 0 1 1 1 0 Uncharacterized YmpT-like Ribosomal_S15 PF00312.22 NODE_43367_length_463_cov_110.306075_g26062_i1reverse_frame_3 - 1.1e-14 54.3 0.8 1.6e-14 53.9 0.8 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 Ribosomal_S13_N PF08069.12 NODE_43367_length_463_cov_110.306075_g26062_i1reverse_frame_3 - 3.4e-08 33.4 0.0 7.7e-08 32.3 0.0 1.6 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Vmethyltransf PF01660.17 NODE_43367_length_463_cov_110.306075_g26062_i1reverse_frame_3 - 0.0049 15.8 0.0 0.0058 15.6 0.0 1.0 1 0 0 1 1 1 1 Viral methyltransferase SPRR2 PF14820.6 NODE_43367_length_463_cov_110.306075_g26062_i1forward_frame_2 - 0.83 9.8 11.8 0.094 12.8 6.5 2.1 1 1 1 2 2 2 0 Small proline-rich 2 Annexin PF00191.20 NODE_43366_length_463_cov_112.630841_g35687_i0forward_frame_3 - 0.058 13.5 0.0 0.099 12.7 0.0 1.3 1 0 0 1 1 1 0 Annexin zf-CCCH PF00642.24 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 0.00082 19.2 0.4 0.0013 18.5 0.4 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 0.018 15.1 0.7 0.031 14.3 0.7 1.4 1 0 0 1 1 1 0 Zinc finger domain zf-CCCH_4 PF18044.1 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 0.019 14.7 1.0 0.034 14.0 1.0 1.4 1 0 0 1 1 1 0 CCCH-type zinc finger Torus PF16131.5 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 0.038 14.7 0.9 0.055 14.2 0.0 1.7 2 0 0 2 2 2 0 Torus domain DUF4551 PF15087.6 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 1.2 7.9 2.4 1.3 7.8 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) NigD_N PF12667.7 NODE_43358_length_463_cov_205.408879_g35680_i0forward_frame_3 - 0.15 12.2 0.0 0.5 10.5 0.0 1.7 2 0 0 2 2 2 0 NigD-like N-terminal OB domain Tctex-1 PF03645.13 NODE_43349_length_463_cov_674.537383_g35671_i0reverse_frame_3 - 1.1e-22 80.1 2.8 1.4e-22 79.8 2.8 1.1 1 0 0 1 1 1 1 Tctex-1 family ASPRs PF17641.2 NODE_43349_length_463_cov_674.537383_g35671_i0reverse_frame_3 - 0.0057 16.9 0.9 0.03 14.6 1.0 1.9 1 1 1 2 2 2 1 Ancylostoma-associated secreted protein related Prominin PF05478.11 NODE_43349_length_463_cov_674.537383_g35671_i0reverse_frame_3 - 0.012 13.6 1.0 0.014 13.4 1.0 1.0 1 0 0 1 1 1 0 Prominin Pkip-1 PF06878.11 NODE_43349_length_463_cov_674.537383_g35671_i0reverse_frame_3 - 0.013 15.6 1.2 0.017 15.2 1.2 1.2 1 0 0 1 1 1 0 Pkip-1 protein zf-LSD1 PF06943.12 NODE_43346_length_463_cov_854.810748_g35668_i0reverse_frame_3 - 8.3e-09 35.1 10.7 3.4e-05 23.6 0.1 2.2 2 0 0 2 2 2 2 LSD1 zinc finger Lar_restr_allev PF14354.6 NODE_43346_length_463_cov_854.810748_g35668_i0reverse_frame_3 - 0.022 15.1 3.1 0.37 11.2 1.7 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar FdhE PF04216.12 NODE_43346_length_463_cov_854.810748_g35668_i0reverse_frame_3 - 0.034 14.0 3.0 0.046 13.6 3.0 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation Elf1 PF05129.13 NODE_43346_length_463_cov_854.810748_g35668_i0reverse_frame_3 - 0.052 13.6 1.1 0.052 13.6 1.1 2.5 2 1 1 3 3 3 0 Transcription elongation factor Elf1 like zf-C3HC4_3 PF13920.6 NODE_43346_length_463_cov_854.810748_g35668_i0reverse_frame_3 - 0.21 11.4 6.2 0.54 10.2 6.2 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) YABBY PF04690.13 NODE_43346_length_463_cov_854.810748_g35668_i0reverse_frame_3 - 1.4 9.5 5.6 1.2 9.7 1.0 2.2 1 1 1 2 2 2 0 YABBY protein DUF805 PF05656.14 NODE_43346_length_463_cov_854.810748_g35668_i0forward_frame_2 - 1.8 9.0 5.5 3 8.3 5.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF805) MamL-1 PF09596.10 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_3 - 0.096 13.0 0.3 0.096 13.0 0.3 2.2 2 0 0 2 2 2 0 MamL-1 domain DUF3649 PF12365.8 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_2 - 0.06 13.1 2.9 41 4.0 0.1 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3649) GT-D PF08759.11 NODE_43342_length_463_cov_1162.796729_g35664_i0reverse_frame_3 - 0.1 12.2 2.1 0.13 11.9 2.1 1.1 1 0 0 1 1 1 0 Glycosyltransferase GT-D fold Cytochrom_C550 PF14495.6 NODE_43336_length_463_cov_7850.413551_g35659_i0forward_frame_3 - 9.3e-49 164.6 0.0 1.1e-48 164.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome c-550 domain Cytochrom_C PF00034.21 NODE_43336_length_463_cov_7850.413551_g35659_i0forward_frame_3 - 1.6e-08 35.6 0.0 2.3e-08 35.1 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 NODE_43336_length_463_cov_7850.413551_g35659_i0forward_frame_3 - 5.1e-05 23.5 0.7 0.00013 22.2 0.7 1.8 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C1 PF02167.15 NODE_43336_length_463_cov_7850.413551_g35659_i0forward_frame_3 - 0.098 12.4 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Cytochrome C1 family DUF1211 PF06736.11 NODE_43333_length_464_cov_2.030303_g35656_i0reverse_frame_2 - 2 8.9 5.0 20 5.7 1.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1211) DUF4503 PF14951.6 NODE_43331_length_464_cov_2.456876_g35654_i0reverse_frame_3 - 0.034 12.6 0.1 0.037 12.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4503) LMBR1 PF04791.16 NODE_43329_length_464_cov_3.123543_g35652_i0reverse_frame_3 - 0.12 11.2 8.6 0.14 11.0 8.6 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4792 PF16040.5 NODE_43328_length_464_cov_3.195804_g35651_i0forward_frame_3 - 0.043 13.7 0.2 0.08 12.9 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4792) NADH_oxidored PF08040.11 NODE_43324_length_464_cov_3.501166_g35647_i0forward_frame_2 - 0.23 11.2 0.9 0.44 10.3 0.9 1.5 1 0 0 1 1 1 0 MNLL subunit Syncollin PF15138.6 NODE_43323_length_464_cov_3.545455_g35646_i0forward_frame_3 - 0.034 14.3 0.2 0.055 13.7 0.2 1.3 1 0 0 1 1 1 0 Syncollin UPF0114 PF03350.16 NODE_43322_length_464_cov_3.685315_g35645_i0reverse_frame_2 - 0.099 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 EPSP_synthase PF00275.20 NODE_43321_length_464_cov_4.100233_g35644_i0reverse_frame_2 - 1.9e-56 191.6 0.1 2e-56 191.5 0.1 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DUF1350 PF07082.11 NODE_43321_length_464_cov_4.100233_g35644_i0forward_frame_2 - 0.1 11.8 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1350) ABC_tran_CTD PF16326.5 NODE_43320_length_464_cov_14.503497_g35643_i0forward_frame_3 - 0.016 15.5 0.2 0.028 14.7 0.2 1.4 1 0 0 1 1 1 0 ABC transporter C-terminal domain Trimer_CC PF08954.11 NODE_43320_length_464_cov_14.503497_g35643_i0forward_frame_3 - 1.8 8.2 6.5 3.4 7.3 6.5 1.5 1 1 0 1 1 1 0 Trimerisation motif RseA_C PF03873.13 NODE_43320_length_464_cov_14.503497_g35643_i0forward_frame_2 - 0.081 13.2 0.2 0.63 10.3 0.0 2.1 2 0 0 2 2 2 0 Anti sigma-E protein RseA, C-terminal domain GST_N_3 PF13417.6 NODE_43315_length_464_cov_80.179487_g35638_i0reverse_frame_2 - 0.18 12.2 0.0 0.32 11.4 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Cyd_oper_YbgE PF09600.10 NODE_43314_length_464_cov_82.396270_g35637_i0forward_frame_2 - 0.068 13.5 0.1 0.12 12.8 0.1 1.4 1 0 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) DUF4223 PF13978.6 NODE_43314_length_464_cov_82.396270_g35637_i0forward_frame_2 - 0.089 12.8 0.2 0.21 11.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4223) PPR_2 PF13041.6 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 2.7e-17 62.7 0.1 7.3e-13 48.5 0.0 1.7 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 2.3e-16 59.6 0.0 1.2e-08 34.9 0.0 1.8 1 1 2 3 3 3 3 Pentatricopeptide repeat domain PPR PF01535.20 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 6.8e-12 44.8 0.0 1.5e-05 24.9 0.0 3.2 3 0 0 3 3 3 3 PPR repeat PPR_1 PF12854.7 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 2.9e-10 39.7 0.0 0.00042 20.0 0.0 2.5 3 0 0 3 3 3 2 PPR repeat CaATP_NAI PF12515.8 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 5.5 6.7 5.1 3.4 7.4 0.0 2.6 3 0 0 3 3 3 0 Ca2+-ATPase N terminal autoinhibitory domain CO_deh_flav_C PF03450.17 NODE_43301_length_464_cov_177.228438_g35624_i0reverse_frame_3 - 0.12 12.5 0.1 0.21 11.8 0.1 1.3 1 0 0 1 1 1 0 CO dehydrogenase flavoprotein C-terminal domain zf-C2HC PF01530.18 NODE_43299_length_464_cov_191.342657_g35622_i0reverse_frame_3 - 0.011 15.9 0.6 0.011 15.9 0.6 2.1 2 0 0 2 2 2 0 Zinc finger, C2HC type Profilin PF00235.19 NODE_43294_length_464_cov_5867.270396_g33394_i2forward_frame_2 - 0.00011 22.4 0.0 0.00016 22.0 0.0 1.1 1 0 0 1 1 1 1 Profilin Abhydrolase_1 PF00561.20 NODE_43288_length_465_cov_1.486047_g35615_i0forward_frame_2 - 0.13 11.9 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold PAS_7 PF12860.7 NODE_43285_length_465_cov_1.962791_g35612_i0reverse_frame_3 - 0.069 13.3 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 PAS fold S-antigen PF05756.11 NODE_43285_length_465_cov_1.962791_g35612_i0forward_frame_3 - 0.83 10.1 8.1 0.45 10.9 6.6 1.4 1 1 0 1 1 1 0 S-antigen protein ClpB_D2-small PF10431.9 NODE_43284_length_465_cov_2.097674_g35611_i0reverse_frame_2 - 3.6e-30 103.9 0.3 5.2e-30 103.3 0.3 1.2 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein MerR-DNA-bind PF09278.11 NODE_43283_length_465_cov_2.116279_g35610_i0reverse_frame_3 - 2.2e-20 73.0 6.6 2.9e-20 72.6 6.6 1.2 1 0 0 1 1 1 1 MerR, DNA binding MerR_1 PF13411.6 NODE_43283_length_465_cov_2.116279_g35610_i0reverse_frame_3 - 1.7e-09 37.6 0.0 3.4e-09 36.7 0.0 1.4 1 0 0 1 1 1 1 MerR HTH family regulatory protein Prp18 PF02840.15 NODE_43283_length_465_cov_2.116279_g35610_i0forward_frame_2 - 0.066 13.3 0.1 0.14 12.2 0.0 1.5 2 0 0 2 2 2 0 Prp18 domain Cse1 PF08506.10 NODE_43280_length_465_cov_2.369767_g35607_i0forward_frame_3 - 4.3e-06 25.8 0.6 5.4e-06 25.5 0.6 1.2 1 1 0 1 1 1 1 Cse1 DUF2067 PF09840.9 NODE_43280_length_465_cov_2.369767_g35607_i0forward_frame_3 - 0.0029 17.2 0.4 0.0037 16.9 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2067) Ribosomal_L12_N PF16320.5 NODE_43280_length_465_cov_2.369767_g35607_i0forward_frame_3 - 0.45 10.3 1.6 11 5.9 0.1 2.8 3 0 0 3 3 3 0 Ribosomal protein L7/L12 dimerisation domain Dus PF01207.17 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 6e-30 104.4 0.0 7.5e-30 104.1 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 1.5e-07 31.1 0.0 1.9e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.14 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 1e-05 25.0 0.0 1.4e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 5.8e-05 22.5 0.0 8e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Thiamine monophosphate synthase G3P_antiterm PF04309.12 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 0.00041 19.8 0.0 0.00057 19.3 0.0 1.2 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator NMO PF03060.15 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 0.0065 15.9 0.0 0.0081 15.6 0.0 1.1 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 0.021 13.9 0.1 0.031 13.3 0.1 1.3 1 1 0 1 1 1 0 FMN-dependent dehydrogenase SOR_SNZ PF01680.17 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 0.06 13.1 0.0 0.08 12.7 0.0 1.1 1 0 0 1 1 1 0 SOR/SNZ family YfhO PF09586.10 NODE_43265_length_465_cov_6.088372_g35592_i0reverse_frame_3 - 0.62 8.2 20.9 0.67 8.1 20.9 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF3566 PF12089.8 NODE_43264_length_465_cov_6.346512_g32509_i1reverse_frame_3 - 0.011 16.1 0.2 0.016 15.5 0.2 1.2 1 0 0 1 1 1 0 Transmembrane domain of unknown function (DUF3566) DUF1516 PF07457.11 NODE_43252_length_465_cov_88.976744_g35580_i0reverse_frame_3 - 0.012 15.8 17.4 0.06 13.6 1.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1516) MFS_5 PF05631.14 NODE_43252_length_465_cov_88.976744_g35580_i0reverse_frame_3 - 0.015 14.3 4.4 0.013 14.4 3.6 1.3 1 1 0 1 1 1 0 Sugar-tranasporters, 12 TM DUF2070 PF09843.9 NODE_43252_length_465_cov_88.976744_g35580_i0reverse_frame_3 - 0.77 8.0 11.9 0.88 7.8 11.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Mago_nashi PF02792.14 NODE_43245_length_465_cov_102.241860_g35573_i0reverse_frame_3 - 9e-35 119.9 0.0 1.2e-34 119.4 0.0 1.2 1 0 0 1 1 1 1 Mago nashi protein PP2C PF00481.21 NODE_43241_length_465_cov_152.469767_g35569_i0forward_frame_2 - 5.4e-24 85.2 0.0 6.4e-24 85.0 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SWC7 PF17330.2 NODE_43241_length_465_cov_152.469767_g35569_i0forward_frame_2 - 0.09 12.8 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 SWR1 chromatin-remodelling complex, sub-unit Swc7 DUF2070 PF09843.9 NODE_43238_length_465_cov_164.988372_g20184_i1forward_frame_3 - 2.7 6.2 9.5 3.2 5.9 9.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Fe-S_biosyn PF01521.20 NODE_43226_length_465_cov_1247.855814_g35555_i0forward_frame_2 - 6.8e-14 52.0 0.0 9.2e-14 51.6 0.0 1.2 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis TFIID_20kDa PF03847.13 NODE_43224_length_465_cov_2749.862791_g33990_i2reverse_frame_3 - 2.6e-12 47.1 0.2 3.9e-12 46.5 0.2 1.3 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Histone PF00125.24 NODE_43224_length_465_cov_2749.862791_g33990_i2reverse_frame_3 - 0.0014 19.0 0.0 0.0014 19.0 0.0 1.9 2 1 0 2 2 2 1 Core histone H2A/H2B/H3/H4 MCM_lid PF17855.1 NODE_43224_length_465_cov_2749.862791_g33990_i2reverse_frame_3 - 0.02 15.3 0.1 0.035 14.5 0.1 1.4 1 1 0 1 1 1 0 MCM AAA-lid domain Profilin PF00235.19 NODE_43219_length_465_cov_5853.586047_g33394_i1reverse_frame_2 - 0.00011 22.4 0.0 0.00016 22.0 0.0 1.1 1 0 0 1 1 1 1 Profilin DXP_redisom_C PF08436.12 NODE_43217_length_465_cov_27664.772093_g35552_i0forward_frame_2 - 0.12 12.5 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Vps54_N PF10475.9 ORF99679 - 0.021 14.2 5.5 0.024 13.9 5.5 1.2 1 0 0 1 1 1 0 Vacuolar-sorting protein 54, of GARP complex Acyl-CoA_dh_2 PF08028.11 ORF99679 - 0.11 12.8 0.9 0.15 12.3 0.9 1.2 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain Syntaxin-6_N PF09177.11 ORF99679 - 0.71 10.5 6.6 3.5 8.2 6.6 2.2 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF4446 PF14584.6 ORF99679 - 3.3 7.7 11.5 0.26 11.3 0.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Ribosomal_L7Ae PF01248.26 ORF99096 - 2.4e-24 84.9 1.6 3.6e-24 84.3 1.6 1.3 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNase_P_pop3 PF08228.11 ORF99096 - 0.00053 20.1 0.1 0.00062 19.9 0.1 1.2 1 0 0 1 1 1 1 RNase P subunit Pop3 Androgen_recep PF02166.16 ORF98559 - 1.8 7.3 7.8 2.2 7.0 7.8 1.1 1 0 0 1 1 1 0 Androgen receptor Kinesin PF00225.23 ORF9738 - 2.3e-25 89.2 0.2 2.6e-25 89.1 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF9738 - 9.4e-15 54.8 0.3 1e-14 54.7 0.3 1.0 1 0 0 1 1 1 1 Microtubule binding EPF PF17181.4 ORF96282 - 0.011 15.7 5.1 0.024 14.7 5.1 1.6 1 0 0 1 1 1 0 Epidermal patterning factor proteins TRAP_alpha PF03896.16 ORF96197 - 0.21 10.7 8.8 0.25 10.5 8.8 1.2 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Sigma70_ner PF04546.13 ORF96197 - 0.29 11.0 12.8 0.41 10.5 12.8 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region Sporozoite_P67 PF05642.11 ORF96197 - 0.39 8.7 9.2 0.46 8.5 9.2 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Herpes_LMP1 PF05297.11 ORF96197 - 1.1 8.3 2.3 1.3 8.2 2.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) AIF_C PF14721.6 ORF96197 - 2.7 8.4 9.6 2 8.8 8.1 1.5 1 1 1 2 2 2 0 Apoptosis-inducing factor, mitochondrion-associated, C-term Aminotran_1_2 PF00155.21 ORF95109 - 8e-05 22.0 0.0 9.4e-05 21.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PTS_EIIA_2 PF00359.22 ORF94521 - 9.5e-34 116.4 0.0 1.1e-33 116.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Geminin PF07412.12 ORF93528 - 0.15 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Geminin PA14 PF07691.12 ORF89852 - 3.2e-15 56.2 0.0 3.7e-15 56.0 0.0 1.0 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 ORF89852 - 0.0078 16.6 0.0 0.013 15.9 0.0 1.5 1 1 0 1 1 1 1 GLEYA domain Arm_3 PF16186.5 ORF88548 - 4.4e-11 42.2 1.4 9.5e-11 41.1 1.4 1.6 1 0 0 1 1 1 1 Atypical Arm repeat Arm PF00514.23 ORF88548 - 0.00015 21.7 0.1 0.16 12.0 0.0 3.1 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat CreA PF05981.12 ORF88548 - 0.023 14.6 0.2 0.062 13.3 0.0 1.7 1 1 0 1 1 1 0 CreA protein Chlorophyllase2 PF12740.7 ORF88548 - 0.064 12.2 0.0 0.085 11.8 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme Kelch_3 PF13415.6 ORF86889 - 7.6e-13 48.4 1.8 2.3e-05 24.5 0.1 2.4 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF86889 - 1.8e-05 24.7 6.8 0.19 11.7 1.2 4.0 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF86889 - 0.0044 17.0 4.0 2.2 8.4 0.0 3.5 3 1 0 3 3 3 2 Kelch motif Transposase_1 PF01359.18 ORF86889 - 0.13 12.1 0.3 0.25 11.2 0.1 1.5 2 0 0 2 2 2 0 Transposase (partial DDE domain) HU-CCDC81_euk_1 PF14908.6 ORF86415 - 1.6e-19 69.9 0.0 2e-19 69.6 0.0 1.2 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 Bac_DNA_binding PF00216.21 ORF86415 - 0.00091 19.4 0.0 0.0015 18.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 ORF86415 - 0.11 12.6 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 HU domain fused to wHTH, Ig, or Glycine-rich motif PPR_2 PF13041.6 ORF85070 - 5.1e-05 23.4 0.0 3.5 7.9 0.0 3.8 2 1 2 4 4 4 3 PPR repeat family PPR PF01535.20 ORF85070 - 0.0014 18.8 0.0 7.2 7.1 0.0 3.7 3 1 0 3 3 3 2 PPR repeat TPR_7 PF13176.6 ORF85070 - 0.0071 16.3 0.1 0.59 10.3 0.0 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat DUF2660 PF10859.8 ORF85070 - 0.065 13.7 0.1 0.22 12.0 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2660) Borrelia_REV PF03978.13 ORF85070 - 0.083 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Borrelia burgdorferi REV protein EpuA PF11772.8 ORF85070 - 0.13 12.0 0.0 23 4.8 0.0 2.4 2 0 0 2 2 2 0 DNA-directed RNA polymerase subunit beta Fungal_trans PF04082.18 ORF84552 - 0.14 11.2 1.1 0.2 10.6 1.1 1.2 1 0 0 1 1 1 0 Fungal specific transcription factor domain DUF2262 PF10020.9 ORF84116 - 0.023 15.1 0.2 0.033 14.6 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) Phage_integrase PF00589.22 ORF83594 - 7.7e-30 103.9 0.0 8.8e-30 103.7 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family Ank_5 PF13857.6 ORF83542 - 2.2e-07 31.0 0.0 4.1e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF83542 - 5.9e-06 26.8 0.0 9.6e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF83542 - 2.1e-05 24.6 0.0 0.0004 20.6 0.0 2.7 3 1 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF83542 - 9.7e-05 22.7 0.0 0.0015 18.9 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 ORF83542 - 0.021 15.4 0.0 0.035 14.7 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeats (many copies) zf-B_box PF00643.24 ORF83542 - 0.081 13.1 8.6 0.19 11.9 7.0 2.2 2 0 0 2 2 2 0 B-box zinc finger TP_methylase PF00590.20 ORF82830 - 0.00067 19.7 0.1 0.0022 18.0 0.0 1.8 2 0 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF1415 PF07209.12 ORF82823 - 5.7e-05 22.9 0.0 0.0012 18.6 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1415) DUF2442 PF10387.9 ORF82823 - 0.063 13.6 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2442) EF-hand_1 PF00036.32 ORF81974 - 1.2e-21 74.6 5.1 9.3e-06 24.8 0.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF81974 - 3.7e-20 72.1 4.1 8.9e-10 38.9 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF81974 - 2.2e-17 61.5 3.3 0.00017 21.2 0.0 4.5 3 1 1 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF81974 - 8.2e-13 48.0 7.9 3.5e-05 23.5 0.2 3.7 2 2 2 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF81974 - 9e-13 47.1 1.0 3.9e-05 23.0 0.0 4.1 4 0 0 4 4 4 3 EF hand SPARC_Ca_bdg PF10591.9 ORF81974 - 3.7e-07 30.4 0.2 0.035 14.4 0.0 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF81974 - 1.2e-06 27.4 0.0 0.00014 20.6 0.0 2.0 1 1 1 2 2 2 2 Family of unknown function (DUF5580) EF-hand_4 PF12763.7 ORF81974 - 9.7e-05 22.3 2.6 0.057 13.4 0.7 2.3 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF81974 - 0.00063 20.0 0.3 0.008 16.5 0.2 2.1 2 0 0 2 2 2 1 EF-hand domain GlutR_dimer PF00745.20 ORF81974 - 0.0033 17.8 0.3 0.15 12.5 0.0 2.2 1 1 1 2 2 2 1 Glutamyl-tRNAGlu reductase, dimerisation domain DUF5109 PF17134.4 ORF81974 - 0.033 14.1 0.5 6.5 6.7 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5109) EF-hand_10 PF14788.6 ORF81974 - 0.04 13.8 0.6 7.4 6.5 0.0 3.4 3 1 1 4 4 4 0 EF hand Stirrup PF09061.6 ORF81974 - 0.18 12.1 0.7 2.1 8.6 0.0 2.4 2 1 0 2 2 2 0 Stirrup S_100 PF01023.19 ORF81974 - 0.27 11.0 1.7 29 4.5 0.0 2.9 2 1 1 3 3 3 0 S-100/ICaBP type calcium binding domain MFS_1 PF07690.16 ORF80779 - 2e-05 23.7 4.1 2.2e-05 23.6 4.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF80779 - 0.00097 17.5 4.8 0.019 13.3 2.1 2.0 1 1 1 2 2 2 2 Organic Anion Transporter Polypeptide (OATP) family Na_Ca_ex PF01699.24 ORF80779 - 0.093 12.7 6.8 2.1 8.3 2.4 2.1 2 0 0 2 2 2 0 Sodium/calcium exchanger protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks143.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks143.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks143.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks143.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ABC_membrane PF00664.23 ORF78814 - 0.035 13.8 7.5 0.058 13.0 7.5 1.3 1 1 0 1 1 1 0 ABC transporter transmembrane region SAP PF02037.27 ORF78263 - 3e-07 30.0 0.1 5.6e-07 29.2 0.1 1.5 1 0 0 1 1 1 1 SAP domain Chordopox_A13L PF05961.11 ORF78230 - 0.072 13.3 0.5 0.19 12.0 0.5 2.0 1 1 0 1 1 1 0 Chordopoxvirus A13L protein HAD_2 PF13419.6 ORF77442 - 3.4e-15 56.6 0.0 4.1e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF77442 - 4.3e-08 33.7 0.0 7.6e-08 32.9 0.0 1.4 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF77442 - 2.8e-05 24.1 0.0 5e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like DUF1768 PF08719.11 ORF77053 - 1.4e-35 122.9 0.3 1.6e-35 122.7 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) MMS19_N PF14500.6 ORF74878 - 0.0059 16.2 0.1 0.1 12.1 0.0 2.0 2 0 0 2 2 2 1 Dos2-interacting transcription regulator of RNA-Pol-II DUF5624 PF18538.1 ORF74878 - 0.02 15.0 0.3 2.2 8.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5624) Cnd1 PF12717.7 ORF74878 - 0.041 13.9 1.7 0.12 12.4 0.2 2.3 1 1 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 YmgB PF10798.8 ORF74878 - 0.08 12.8 2.7 4.9 7.0 0.1 2.4 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR Luciferase_N PF05295.11 ORF74878 - 0.15 12.1 0.2 1.4 9.0 0.0 2.5 2 1 1 3 3 3 0 Luciferase/LBP N-terminal domain PsbH PF00737.20 ORF74207 - 7.1e-07 28.9 0.4 1.2e-06 28.1 0.4 1.4 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 ORF74207 - 0.036 13.8 0.9 0.059 13.1 0.4 1.6 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF74207 - 0.071 13.5 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Sdh_cyt PF01127.22 ORF74207 - 0.11 12.5 0.0 0.24 11.4 0.0 1.5 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AA_kinase PF00696.28 ORF7334 - 1.8e-18 67.0 0.0 2e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family bZIP_1 PF00170.21 ORF72806 - 0.00077 19.5 16.5 0.0022 18.0 15.9 1.9 1 1 1 2 2 2 1 bZIP transcription factor CortBP2 PF09727.9 ORF72806 - 0.00085 19.3 9.7 0.0011 19.0 9.7 1.0 1 0 0 1 1 1 1 Cortactin-binding protein-2 Mei5_like PF17021.5 ORF72806 - 0.0025 17.8 9.5 0.0037 17.3 9.5 1.2 1 0 0 1 1 1 1 Putative double-strand recombination repair-like COG5 PF10392.9 ORF72806 - 0.015 15.5 5.9 0.34 11.1 5.9 2.0 1 1 0 1 1 1 0 Golgi transport complex subunit 5 BRE1 PF08647.11 ORF72806 - 0.028 14.5 11.2 0.04 14.0 11.2 1.4 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase SlyX PF04102.12 ORF72806 - 0.028 15.0 2.1 0.028 15.0 2.1 1.7 1 1 1 2 2 2 0 SlyX MCM_N PF14551.6 ORF72806 - 0.029 14.9 0.8 0.041 14.5 0.8 1.3 1 0 0 1 1 1 0 MCM N-terminal domain ABC_tran_CTD PF16326.5 ORF72806 - 0.064 13.5 7.3 0.11 12.7 6.4 1.9 1 1 1 2 2 2 0 ABC transporter C-terminal domain Sod_Fe_N PF00081.22 ORF72806 - 0.11 13.0 1.7 0.17 12.4 0.2 1.9 1 1 1 2 2 2 0 Iron/manganese superoxide dismutases, alpha-hairpin domain YtxH PF12732.7 ORF72806 - 0.16 12.6 5.6 0.42 11.2 5.6 1.7 1 1 0 1 1 1 0 YtxH-like protein FapA PF03961.13 ORF72806 - 0.17 10.4 9.9 0.2 10.2 9.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF16 PF01519.16 ORF72806 - 0.28 11.7 7.4 0.49 10.9 7.4 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 RasGAP_C PF03836.15 ORF72806 - 0.3 11.2 10.5 0.073 13.2 4.5 2.1 1 1 1 2 2 2 0 RasGAP C-terminus Vma12 PF11712.8 ORF72806 - 0.47 10.5 2.5 0.55 10.3 2.5 1.2 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Atg14 PF10186.9 ORF72806 - 0.55 9.3 11.5 0.74 8.8 11.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 bZIP_2 PF07716.15 ORF72806 - 0.62 10.2 18.2 0.072 13.2 11.3 2.4 1 1 2 3 3 2 0 Basic region leucine zipper DUF4446 PF14584.6 ORF72806 - 0.79 9.7 5.7 0.98 9.4 5.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) UPF0242 PF06785.11 ORF72806 - 1.8 8.7 8.9 2.6 8.1 8.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4140 PF13600.6 ORF72806 - 3.8 8.0 8.6 22 5.6 8.6 2.0 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Arm-DNA-bind_5 PF17293.2 ORF72806 - 4.2 7.9 13.1 1.7 9.1 5.3 2.2 1 1 1 2 2 2 0 Arm DNA-binding domain Presenilin PF01080.17 ORF72806 - 6.6 5.4 4.8 7.8 5.1 4.8 1.0 1 0 0 1 1 1 0 Presenilin DUF2570 PF10828.8 ORF72806 - 6.9 6.5 9.5 1.1 9.2 1.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) TMPIT PF07851.13 ORF72806 - 8.6 5.5 8.0 11 5.1 8.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein XhlA PF10779.9 ORF72806 - 9.3 6.5 11.1 2.5 8.4 5.5 2.5 1 1 2 3 3 3 0 Haemolysin XhlA Plant_vir_prot PF01307.17 ORF70312 - 0.012 15.9 0.1 0.017 15.4 0.1 1.3 1 0 0 1 1 1 0 Plant viral movement protein CagS PF16707.5 ORF70312 - 0.031 14.3 0.0 0.037 14.0 0.0 1.3 1 0 0 1 1 1 0 Cag pathogenicity island protein S of Helicobacter pylori PPR PF01535.20 ORF69862 - 2.1e-12 46.4 0.3 0.0018 18.4 0.0 3.3 3 0 0 3 3 3 3 PPR repeat PPR_2 PF13041.6 ORF69862 - 3.2e-09 36.9 0.1 0.0011 19.1 0.0 3.8 2 2 2 4 4 4 4 PPR repeat family PPR_3 PF13812.6 ORF69862 - 4.8e-09 36.2 0.0 6.9e-05 22.8 0.0 2.2 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF69862 - 4.9e-06 26.1 0.0 7.3e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF69862 - 0.04 13.6 4.0 3.5 7.4 0.0 3.4 3 1 0 3 3 3 0 PPR repeat DUF2070 PF09843.9 ORF69492 - 3.2 5.9 14.7 3.4 5.9 14.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF364 PF04016.12 ORF68576 - 0.2 11.2 0.0 0.32 10.6 0.0 1.3 1 0 0 1 1 1 0 Putative heavy-metal chelation ALIX_LYPXL_bnd PF13949.6 ORF63047 - 5.5e-19 68.6 10.8 1.6e-14 53.9 5.9 2.0 1 1 1 2 2 2 2 ALIX V-shaped domain binding to HIV L27_1 PF09058.10 ORF63047 - 0.00032 20.6 3.6 0.0012 18.8 0.1 3.1 2 2 0 2 2 2 1 L27_1 DUF1722 PF08349.11 ORF63047 - 0.00038 20.7 5.0 0.00062 20.0 4.7 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1722) tRNA_lig_CPD PF08302.11 ORF63047 - 0.00058 19.4 3.4 0.00074 19.0 3.4 1.1 1 0 0 1 1 1 1 Fungal tRNA ligase phosphodiesterase domain GLE1 PF07817.13 ORF63047 - 0.0022 17.2 0.9 0.0031 16.7 0.9 1.3 1 0 0 1 1 1 1 GLE1-like protein Vma12 PF11712.8 ORF63047 - 0.0075 16.3 2.7 0.0096 16.0 2.7 1.3 1 0 0 1 1 1 1 Endoplasmic reticulum-based factor for assembly of V-ATPase OmpH PF03938.14 ORF63047 - 0.009 16.4 4.5 0.012 16.0 4.5 1.3 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) GON PF08685.11 ORF63047 - 0.017 15.0 0.5 0.029 14.3 0.4 1.4 1 1 0 1 1 1 0 GON domain G6PD_N PF00479.22 ORF63047 - 0.02 15.6 1.9 0.022 15.4 1.9 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, NAD binding domain YihI PF04220.12 ORF63047 - 0.021 14.6 3.2 0.024 14.3 2.4 1.4 1 1 0 1 1 1 0 Der GTPase activator (YihI) EMC3_TMCO1 PF01956.16 ORF63047 - 0.036 13.8 3.0 0.047 13.4 3.0 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF2852 PF11014.8 ORF63047 - 0.039 14.1 0.4 0.056 13.6 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) Isochorismatase PF00857.20 ORF63047 - 0.053 13.7 0.0 0.069 13.3 0.0 1.1 1 0 0 1 1 1 0 Isochorismatase family SseC PF04888.12 ORF63047 - 0.091 12.3 0.8 0.11 12.1 0.8 1.2 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family EST1 PF10374.9 ORF63047 - 0.1 13.2 6.4 0.23 12.1 6.4 1.7 1 1 0 1 1 1 0 Telomerase activating protein Est1 AAA_23 PF13476.6 ORF63047 - 0.12 12.8 7.4 0.18 12.3 7.4 1.3 1 0 0 1 1 1 0 AAA domain PIN_12 PF16289.5 ORF63047 - 0.13 12.8 6.3 0.18 12.3 6.3 1.3 1 0 0 1 1 1 0 PIN domain Atg14 PF10186.9 ORF63047 - 0.22 10.6 8.1 0.35 9.9 8.1 1.3 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4404 PF14357.6 ORF63047 - 0.39 11.4 7.2 0.52 11.0 3.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) LOH1CR12 PF10158.9 ORF63047 - 0.69 9.9 5.6 0.92 9.5 2.6 2.2 1 1 1 2 2 2 0 Tumour suppressor protein WD-3 PF09765.9 ORF63047 - 0.72 9.1 5.6 1.8 7.9 4.4 1.8 1 1 1 2 2 2 0 WD-repeat region EMP24_GP25L PF01105.24 ORF62212 - 0.036 14.0 0.7 0.039 13.9 0.7 1.2 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD MFS_1 PF07690.16 ORF61874 - 1.7e-05 23.9 14.8 2e-05 23.7 14.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DuoxA PF10204.9 ORF61874 - 0.18 10.8 2.7 0.067 12.2 0.5 1.3 2 0 0 2 2 2 0 Dual oxidase maturation factor Ribosomal_S11 PF00411.19 ORF60370 - 7.6e-38 129.3 0.2 9.2e-38 129.0 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 WW PF00397.26 ORF60338 - 0.00048 20.2 0.0 0.0017 18.4 0.0 1.9 2 0 0 2 2 2 1 WW domain MalF_P2 PF14785.6 ORF60338 - 0.093 12.8 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Maltose transport system permease protein MalF P2 domain XRN_M PF17846.1 ORF60338 - 0.29 10.0 0.6 0.33 9.9 0.6 1.0 1 0 0 1 1 1 0 Xrn1 helical domain BET PF17035.5 ORF60238 - 1.2e-05 25.4 2.7 2.6e-05 24.3 2.7 1.6 1 0 0 1 1 1 1 Bromodomain extra-terminal - transcription regulation Mvb12 PF09452.10 ORF60238 - 0.033 14.6 0.2 0.068 13.6 0.2 1.5 1 1 0 1 1 1 0 ESCRT-I subunit Mvb12 Cdh1_DBD_1 PF18196.1 ORF60238 - 0.24 11.7 4.9 0.099 13.0 2.2 1.7 1 1 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 POX PF07526.11 ORF60238 - 1.5 9.4 5.8 0.6 10.7 1.5 2.0 2 0 0 2 2 2 0 Associated with HOX FumaraseC_C PF10415.9 ORF59896 - 5.7e-05 23.5 9.1 0.036 14.5 0.7 3.4 3 1 0 3 3 3 2 Fumarase C C-terminus PhageMin_Tail PF10145.9 ORF59896 - 0.0011 18.9 8.2 0.042 13.7 3.3 2.2 2 0 0 2 2 2 2 Phage-related minor tail protein Get5_C PF18514.1 ORF59896 - 0.0069 16.1 5.2 12 5.7 0.0 4.1 4 0 0 4 4 4 1 Get5 C-terminal domain ISP1_C PF18161.1 ORF59896 - 0.0087 16.0 0.0 1.1 9.3 0.0 2.6 1 1 1 2 2 2 1 ISP1 C-terminal DUF1104 PF06518.11 ORF59896 - 0.046 14.1 4.0 0.079 13.3 4.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) RHH_4 PF13467.6 ORF59896 - 0.062 13.2 1.9 16 5.5 0.1 3.1 2 1 1 3 3 3 0 Ribbon-helix-helix domain AD PF09793.9 ORF59896 - 0.094 12.9 0.9 0.19 11.9 0.7 1.6 1 1 0 1 1 1 0 Anticodon-binding domain OKR_DC_1_C PF03711.15 ORF59896 - 0.15 12.3 0.6 0.38 11.1 0.4 1.7 1 1 1 2 2 2 0 Orn/Lys/Arg decarboxylase, C-terminal domain QslA_E PF18226.1 ORF59896 - 0.24 11.3 3.5 8.9 6.3 0.1 3.2 1 1 2 3 3 3 0 LasR-specific antiactivator QslA chain E HTH_Tnp_ISL3 PF13542.6 ORF59896 - 0.4 10.1 1.7 5 6.6 0.1 3.0 3 1 0 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 DUF3235 PF11574.8 ORF59896 - 0.76 10.7 3.0 26 5.7 0.2 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3235) SinI PF08671.10 ORF59896 - 7.9 6.4 12.7 38 4.2 0.1 4.9 5 0 0 5 5 5 0 Anti-repressor SinI Beta_helix PF13229.6 ORF59305 - 6e-17 61.9 12.9 9.1e-17 61.4 12.9 1.2 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 ORF59305 - 6.7e-14 51.7 10.6 8.6e-14 51.4 10.6 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Disaggr_assoc PF08480.10 ORF59305 - 0.0013 18.7 6.5 0.002 18.0 6.5 1.3 1 1 0 1 1 1 1 Disaggregatase related DUF5567 PF17722.1 ORF57889 - 0.015 15.2 0.1 0.019 14.9 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5567) SIN1_PH PF16979.5 ORF56824 - 5.9e-06 26.5 2.2 9e-06 25.9 2.2 1.3 1 0 0 1 1 1 1 SAPK-interacting protein 1 (Sin1), Pleckstrin-homology MerR PF00376.23 ORF55006 - 0.04 13.7 0.0 0.076 12.8 0.0 1.5 1 0 0 1 1 1 0 MerR family regulatory protein DUF4050 PF13259.6 ORF5475 - 0.11 12.8 2.4 0.12 12.7 2.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4050) PA14 PF07691.12 ORF52468 - 3.2e-15 56.2 0.0 3.7e-15 56.0 0.0 1.0 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 ORF52468 - 0.0078 16.6 0.0 0.013 15.9 0.0 1.5 1 1 0 1 1 1 1 GLEYA domain Acyl_transf_1 PF00698.21 ORF52131 - 0.0031 17.1 0.0 0.0038 16.8 0.0 1.0 1 0 0 1 1 1 1 Acyl transferase domain DUF3952 PF13130.6 ORF52131 - 0.096 12.9 0.2 0.35 11.1 0.0 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3952) SAT PF16073.5 ORF52131 - 0.15 11.8 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Starter unit:ACP transacylase in aflatoxin biosynthesis RNA_pol_3_Rpc31 PF11705.8 ORF52115 - 0.18 12.0 7.8 0.19 11.9 7.8 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 BTB PF00651.31 ORF5105 - 2.8e-14 53.3 0.0 4.2e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 BTB/POZ domain Skp1_POZ PF03931.15 ORF5105 - 0.077 13.2 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Skp1 family, tetramerisation domain IHO1 PF15771.5 ORF5105 - 0.11 11.3 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 HpaB PF03241.13 ORF5101 - 0.23 10.5 0.0 0.39 9.8 0.0 1.3 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase C terminal BDV_P40 PF06407.11 ORF50915 - 0.024 13.8 0.3 0.032 13.3 0.3 1.2 1 0 0 1 1 1 0 Borna disease virus P40 protein DNA_gyraseB PF00204.25 ORF50742 - 0.053 13.0 0.3 0.38 10.2 0.1 2.1 2 0 0 2 2 2 0 DNA gyrase B Adeno_knob PF00541.17 ORF50742 - 0.058 13.1 0.1 0.077 12.7 0.1 1.1 1 0 0 1 1 1 0 Adenoviral fibre protein (knob domain) CYTL1 PF15153.6 ORF50742 - 0.14 12.1 0.8 0.3 11.1 0.6 1.6 1 1 1 2 2 2 0 Cytokine-like protein 1 Phage_TAC_5 PF08890.11 ORF50200 - 0.0015 18.5 1.0 0.0044 17.0 0.0 1.9 1 1 1 2 2 2 1 Phage XkdN-like tail assembly chaperone protein, TAC Pil1 PF13805.6 ORF50200 - 0.0073 15.8 1.2 0.01 15.3 1.2 1.2 1 0 0 1 1 1 1 Eisosome component PIL1 Fib_alpha PF08702.10 ORF50200 - 0.16 12.2 2.3 0.21 11.8 2.3 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family NDK PF00334.19 ORF48507 - 2.1e-54 183.2 0.0 2.4e-54 183.0 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase HEAT_EZ PF13513.6 ORF47701 - 0.0024 18.3 0.0 0.85 10.2 0.0 2.4 2 0 0 2 2 2 2 HEAT-like repeat Cnd1 PF12717.7 ORF47701 - 0.02 14.9 0.0 0.042 13.9 0.0 1.8 1 1 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 ORF47701 - 0.13 12.6 0.1 4.5 7.8 0.1 3.0 3 0 0 3 3 3 0 HEAT repeat Arg_repressor PF01316.21 ORF4562 - 0.0048 16.6 0.2 0.011 15.5 0.0 1.6 2 0 0 2 2 2 1 Arginine repressor, DNA binding domain Aldo_ket_red PF00248.21 ORF44361 - 1.9e-08 33.9 0.0 1.9e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family DUF1413 PF07205.11 ORF44361 - 0.14 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1413) Pkinase PF00069.25 ORF44218 - 4.4e-06 26.2 0.0 6.3e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase PF00069.25 ORF41960 - 0.00053 19.4 0.2 0.0011 18.4 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain PsbH PF00737.20 ORF41807 - 7.1e-07 28.9 0.4 1.2e-06 28.1 0.4 1.4 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 ORF41807 - 0.036 13.8 0.9 0.059 13.1 0.4 1.6 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF41807 - 0.071 13.5 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Sdh_cyt PF01127.22 ORF41807 - 0.11 12.5 0.0 0.24 11.4 0.0 1.5 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SET PF00856.28 ORF41556 - 0.19 12.1 0.3 0.46 10.8 0.2 1.7 2 0 0 2 2 2 0 SET domain ABC_tran PF00005.27 ORF41257 - 1.3e-10 41.9 0.1 2.5e-10 41.0 0.1 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF41257 - 3.1e-05 23.5 0.5 4.1e-05 23.1 0.5 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Amidohydro_1 PF01979.20 ORF39325 - 1.2e-09 37.9 0.0 1.4e-09 37.7 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF39325 - 7.3e-06 25.7 0.0 7.6e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family UCH PF00443.29 ORF39290 - 2.9e-14 53.2 0.0 3.1e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Pkinase_Tyr PF07714.17 ORF37540 - 4.7e-07 29.4 0.0 5.6e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF37540 - 0.002 17.6 0.0 0.0025 17.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain SpoIIIAH PF12685.7 ORF37229 - 0.046 13.5 5.7 0.053 13.4 5.7 1.1 1 0 0 1 1 1 0 SpoIIIAH-like protein RR_TM4-6 PF06459.12 ORF37229 - 0.15 11.9 6.5 0.16 11.8 6.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF3043 PF11241.8 ORF37229 - 0.18 11.8 7.7 0.29 11.1 7.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF755 PF05501.11 ORF37229 - 0.26 11.6 16.3 0.39 11.0 16.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF755) DUF719 PF05334.13 ORF37229 - 0.28 11.4 6.8 0.35 11.0 6.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF719) DUF3408 PF11888.8 ORF37229 - 0.58 10.3 6.6 0.79 9.9 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) Tim54 PF11711.8 ORF37229 - 0.79 8.4 6.6 0.94 8.2 6.6 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Presenilin PF01080.17 ORF37229 - 2.8 6.6 5.9 2.9 6.6 5.9 1.1 1 0 0 1 1 1 0 Presenilin Ndc1_Nup PF09531.10 ORF37229 - 6.1 5.4 6.6 6.4 5.3 6.6 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup SdrG_C_C PF10425.9 ORF36089 - 0.045 13.8 0.9 0.06 13.4 0.9 1.2 1 0 0 1 1 1 0 C-terminus of bacterial fibrinogen-binding adhesin Peptidase_S41_N PF11918.8 ORF36089 - 0.13 12.5 0.0 0.25 11.6 0.0 1.5 2 0 0 2 2 2 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP Ank_2 PF12796.7 ORF35332 - 2e-10 41.1 0.3 2e-08 34.7 0.7 2.1 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF35332 - 2.6e-08 34.2 0.0 0.00021 21.8 0.0 2.9 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF35332 - 6.9e-08 32.2 0.1 0.088 13.4 0.0 3.7 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF35332 - 5.7e-07 29.7 0.3 0.0036 17.6 0.0 2.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF35332 - 9.4e-06 25.9 0.8 2.7 8.6 0.2 3.9 4 0 0 4 4 4 3 Ankyrin repeat zf-LITAF-like PF10601.9 ORF34039 - 1.5e-08 34.8 6.4 2.1e-08 34.3 6.4 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF3484 PF11983.8 ORF34039 - 1.1 10.4 6.3 1.8 9.7 5.6 1.7 1 1 0 1 1 1 0 Membrane-attachment and polymerisation-promoting switch DUF2076 PF09849.9 ORF34039 - 8.5 6.3 8.1 11 6.0 8.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF4296 PF14129.6 ORF33442 - 0.00087 19.8 0.0 0.0019 18.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4296) DUF5600 PF18150.1 ORF33442 - 0.14 12.7 0.6 1.6 9.3 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF5600) Glyco_transf_10 PF00852.19 ORF33202 - 9.5e-15 54.7 0.2 3.5e-14 52.9 0.1 1.7 2 0 0 2 2 2 1 Glycosyltransferase family 10 (fucosyltransferase) C-term Glyco_trans_1_2 PF13524.6 ORF33202 - 0.14 12.5 0.2 0.35 11.3 0.0 1.7 2 0 0 2 2 2 0 Glycosyl transferases group 1 Asp PF00026.23 ORF3257 - 5.7e-16 58.8 0.1 6.2e-16 58.7 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Androgen_recep PF02166.16 ORF31697 - 1.8 7.3 7.8 2.2 7.0 7.8 1.1 1 0 0 1 1 1 0 Androgen receptor DUF782 PF05614.11 ORF30832 - 0.036 14.4 0.1 0.083 13.3 0.1 1.5 1 1 0 1 1 1 0 Circovirus protein of unknown function (DUF782) F-box PF00646.33 ORF2822 - 7.7e-06 25.7 1.5 0.00017 21.3 0.1 2.3 2 0 0 2 2 2 2 F-box domain F-box-like PF12937.7 ORF2822 - 2e-05 24.4 0.7 4.4e-05 23.3 0.7 1.7 1 0 0 1 1 1 1 F-box-like MerR PF00376.23 ORF28105 - 0.04 13.7 0.0 0.076 12.8 0.0 1.5 1 0 0 1 1 1 0 MerR family regulatory protein Rot1 PF10681.9 ORF27542 - 0.16 11.4 1.2 0.23 11.0 1.0 1.3 1 1 0 1 1 1 0 Chaperone for protein-folding within the ER, fungal Adaptin_binding PF10199.9 ORF27542 - 0.27 11.8 6.4 0.38 11.4 6.4 1.2 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Spectrin PF00435.21 ORF27529 - 0.024 15.1 1.3 0.024 15.1 1.3 1.6 2 0 0 2 2 2 0 Spectrin repeat DUF1289 PF06945.13 ORF26085 - 0.03 14.1 0.4 0.54 10.1 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1289) SMAP PF15477.6 ORF25949 - 0.013 16.4 0.1 0.023 15.6 0.1 1.5 1 0 0 1 1 1 0 Small acidic protein family DUF924 PF06041.11 ORF25369 - 4.7e-39 134.4 0.9 5.5e-39 134.2 0.9 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) GCIP PF13324.6 ORF25298 - 0.0062 16.2 0.3 0.0081 15.8 0.3 1.1 1 0 0 1 1 1 1 Grap2 and cyclin-D-interacting PPL5 PF18168.1 ORF2411 - 0.19 11.0 3.8 0.22 10.8 3.8 1.0 1 0 0 1 1 1 0 Prim-pol family 5 SpoIIIAH PF12685.7 ORF2411 - 0.67 9.7 16.3 1.1 9.0 7.4 2.2 1 1 1 2 2 2 0 SpoIIIAH-like protein ABC_tran PF00005.27 ORF23936 - 0.0012 19.3 0.0 0.0016 19.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF23936 - 0.069 12.6 0.1 1.3 8.4 0.0 2.0 1 1 1 2 2 2 0 RecF/RecN/SMC N terminal domain DUF742 PF05331.11 ORF23132 - 0.016 15.0 0.1 0.031 14.1 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF742) AJAP1_PANP_C PF15298.6 ORF23132 - 0.094 12.9 0.2 0.12 12.6 0.2 1.3 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF4713 PF15831.5 ORF23132 - 1.3 9.5 12.6 2.1 8.8 12.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) Abhydrolase_1 PF00561.20 ORF21762 - 0.0013 18.4 0.0 0.0013 18.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF4884 PF16225.5 ORF21762 - 0.038 14.1 0.1 0.073 13.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4884) BAAT_C PF08840.11 ORF21762 - 0.041 13.8 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Pentapeptide_4 PF13599.6 ORF21679 - 0.16 12.1 3.0 1.2 9.3 3.0 2.1 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) ALG3 PF05208.13 ORF19220 - 7.4e-07 28.9 4.3 7.5e-07 28.9 4.3 1.0 1 0 0 1 1 1 1 ALG3 protein ANAPC15 PF15243.6 ORF1806 - 0.13 12.7 3.0 8.6 6.8 0.4 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 15 DUF2300 PF10062.9 ORF1806 - 0.65 10.1 7.6 4.9 7.3 1.4 2.2 2 0 0 2 2 2 0 Predicted secreted protein (DUF2300) CRISPR_assoc PF08798.11 ORF1806 - 2.2 8.3 7.9 1 9.4 0.4 2.1 1 1 0 2 2 2 0 CRISPR associated protein Ribosomal_L28e PF01778.17 ORF17253 - 1.3e-14 55.0 2.2 1.8e-14 54.5 2.2 1.2 1 0 0 1 1 1 1 Ribosomal L28e protein family MORN PF02493.20 ORF16999 - 1.1e-37 125.7 51.8 6.5e-09 35.2 2.2 7.1 7 0 0 7 7 7 7 MORN repeat Tudor_2 PF18104.1 ORF16999 - 0.39 10.4 0.2 0.39 10.4 0.2 5.4 6 1 0 6 6 6 0 Jumonji domain-containing protein 2A Tudor domain DUF523 PF04463.12 ORF16999 - 3.1 7.8 5.4 19 5.3 0.1 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF523) Pkinase PF00069.25 ORF16531 - 0.00053 19.4 0.2 0.0011 18.4 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain Nterm_IS4 PF13006.7 ORF15283 - 0.1 12.8 0.1 0.17 12.1 0.1 1.5 1 0 0 1 1 1 0 Insertion element 4 transposase N-terminal Phostensin PF13914.6 ORF15110 - 0.069 13.8 0.4 0.095 13.3 0.4 1.2 1 0 0 1 1 1 0 Phostensin PP1-binding and SH3-binding region LMF1 PF06762.14 ORF13843 - 0.078 12.1 0.1 0.095 11.8 0.1 1.1 1 0 0 1 1 1 0 Lipase maturation factor TCR PF03638.15 ORF13439 - 4.4e-07 30.1 13.1 8.4e-07 29.2 13.1 1.5 1 0 0 1 1 1 1 Tesmin/TSO1-like CXC domain, cysteine-rich domain preSET_CXC PF18264.1 ORF13439 - 0.96 10.0 10.0 1.6 9.2 10.0 1.4 1 0 0 1 1 1 0 CXC domain Met_synt_B12 PF02965.17 ORF12682 - 3.1e-65 220.4 0.5 3.4e-65 220.2 0.5 1.0 1 0 0 1 1 1 1 Vitamin B12 dependent methionine synthase, activation domain Ion_trans PF00520.31 ORF111737 - 0.027 13.7 0.1 0.034 13.4 0.1 1.2 1 0 0 1 1 1 0 Ion transport protein RasGAP PF00616.19 ORF111737 - 0.063 13.0 0.1 0.14 11.9 0.0 1.5 2 0 0 2 2 2 0 GTPase-activator protein for Ras-like GTPase DUF2142 PF09913.9 ORF111321 - 0.73 8.6 1.1 0.94 8.3 1.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) DUF3835 PF12927.7 ORF111321 - 3.1 8.7 9.5 7.2 7.5 2.6 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF3835) PsbH PF00737.20 ORF111004 - 7.6e-07 28.8 0.4 1.3e-06 28.0 0.4 1.4 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Sdh_cyt PF01127.22 ORF111004 - 0.061 13.4 0.0 0.23 11.5 0.0 1.8 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Ycf70 PF17382.2 ORF111004 - 0.095 13.1 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Glyco_transf_22 PF03901.17 ORF110845 - 0.046 12.9 0.8 0.055 12.7 0.8 1.0 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family MerR-DNA-bind PF09278.11 ORF1105 - 5.3e-15 55.7 0.1 9.1e-15 54.9 0.1 1.4 1 0 0 1 1 1 1 MerR, DNA binding MerR PF00376.23 ORF1105 - 6.5e-14 51.4 0.4 1.5e-13 50.2 0.1 1.8 2 0 0 2 2 2 1 MerR family regulatory protein MerR_1 PF13411.6 ORF1105 - 3.1e-11 43.2 0.0 5.2e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_3 PF01381.22 ORF1105 - 0.031 14.3 0.1 0.94 9.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix DUF2670 PF10875.8 ORF1105 - 0.047 13.8 0.0 0.073 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) TPP_enzyme_M PF00205.22 ORF1105 - 0.12 12.1 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Polysacc_synt_C PF14667.6 ORF110062 - 0.15 12.2 4.4 0.17 11.9 3.8 1.5 1 1 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain FerA PF08165.11 ORF109828 - 0.13 12.2 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 FerA (NUC095) domain WES_acyltransf PF03007.16 ORF109673 - 1.3e-08 35.0 0.0 1.7e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain EF-hand_7 PF13499.6 ORF109431 - 2.6e-11 43.8 0.2 5.5e-11 42.8 0.2 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF109431 - 5.1e-10 39.0 0.2 5.4e-07 29.4 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF109431 - 9.9e-09 34.4 0.2 8.1e-06 25.4 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF109431 - 1.2e-08 33.9 0.0 0.00014 21.2 0.0 2.6 2 0 0 2 2 2 2 EF hand Pkinase PF00069.25 ORF109431 - 2.3e-07 30.5 4.3 6.6e-07 29.0 0.1 2.4 2 1 0 2 2 2 1 Protein kinase domain EF-hand_11 PF08976.11 ORF109431 - 0.0076 17.1 0.1 0.019 15.8 0.0 1.7 2 0 0 2 2 2 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF109431 - 0.0093 16.3 0.8 0.015 15.6 0.7 1.5 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Gp-FAR-1 PF05823.12 ORF109431 - 0.017 15.5 0.5 0.017 15.5 0.5 2.3 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) EF-hand_5 PF13202.6 ORF109431 - 0.025 14.1 0.0 1.7 8.2 0.0 2.6 2 0 0 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF109431 - 0.03 14.3 0.6 0.079 12.9 0.1 1.9 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand MgtE_N PF03448.17 ORF109431 - 0.038 14.6 2.2 0.075 13.6 2.2 1.5 1 0 0 1 1 1 0 MgtE intracellular N domain Autophagy_N PF03986.13 ORF109431 - 0.04 13.9 0.4 2.9 7.8 0.0 2.6 2 1 1 3 3 3 0 Autophagocytosis associated protein (Atg3), N-terminal domain hnRNP_Q_AcD PF18360.1 ORF109431 - 0.04 13.9 0.6 0.73 9.8 0.1 2.4 1 1 0 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain RICTOR_M PF14666.6 ORF109431 - 0.21 11.4 1.9 18 5.1 0.0 3.0 2 1 1 3 3 3 0 Rapamycin-insensitive companion of mTOR, middle domain DUF1633 PF07794.11 ORF108711 - 0.092 10.9 0.3 0.12 10.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) Ion_trans PF00520.31 ORF105199 - 0.027 13.7 0.1 0.034 13.4 0.1 1.2 1 0 0 1 1 1 0 Ion transport protein RasGAP PF00616.19 ORF105199 - 0.063 13.0 0.1 0.14 11.9 0.0 1.5 2 0 0 2 2 2 0 GTPase-activator protein for Ras-like GTPase Ntox17 PF15524.6 ORF104714 - 0.0013 19.0 0.0 0.0019 18.4 0.0 1.3 1 0 0 1 1 1 1 Novel toxin 17 NOA36 PF06524.12 ORF1045 - 1.3 8.3 12.8 2.1 7.6 12.8 1.3 1 0 0 1 1 1 0 NOA36 protein FAM60A PF15396.6 ORF1045 - 2.9 7.8 8.1 4 7.4 8.1 1.2 1 0 0 1 1 1 0 Protein Family FAM60A CDC45 PF02724.14 ORF1045 - 3.1 6.0 11.3 3.2 5.9 11.3 1.1 1 0 0 1 1 1 0 CDC45-like protein PsbH PF00737.20 ORF104010 - 8.1e-07 28.7 0.4 1.3e-06 28.0 0.4 1.3 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Ycf70 PF17382.2 ORF104010 - 0.097 13.1 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Sdh_cyt PF01127.22 ORF104010 - 0.11 12.6 0.0 0.23 11.5 0.0 1.5 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PsbH PF00737.20 ORF101673 - 6.7e-07 28.9 0.4 1.2e-06 28.1 0.4 1.4 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein DUF1011 PF06237.12 ORF101673 - 0.0076 16.6 0.0 1.4 9.3 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF1011) Adeno_PV PF03910.13 ORF101673 - 0.032 13.0 0.0 0.04 12.6 0.0 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV Oxidored_q3 PF00499.20 ORF101673 - 0.059 13.1 0.4 0.059 13.1 0.4 1.4 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF101673 - 0.07 13.5 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like RNaseH_C PF09293.10 ORF101015 - 0.011 16.1 2.3 0.014 15.7 2.3 1.4 1 1 0 1 1 1 0 T4 RNase H, C terminal DUF4094 PF13334.6 ORF101015 - 0.038 14.4 1.9 0.086 13.3 1.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) BLOC1_2 PF10046.9 ORF101015 - 0.19 12.1 6.0 0.39 11.0 6.0 1.5 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ABC2_membrane_3 PF12698.7 NODE_43764_length_457_cov_2.701422_g36062_i0reverse_frame_1 - 0.99 8.4 5.7 1.3 8.1 5.7 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein RhaT PF06379.12 NODE_43762_length_457_cov_3.161137_g36060_i0reverse_frame_1 - 0.07 12.3 0.1 0.11 11.7 0.1 1.2 1 0 0 1 1 1 0 L-rhamnose-proton symport protein (RhaT) LamB PF02264.15 NODE_43759_length_457_cov_4.222749_g36057_i0reverse_frame_1 - 2.9e-19 70.2 1.7 4e-19 69.8 1.7 1.2 1 0 0 1 1 1 1 LamB porin DUF2626 PF11117.8 NODE_43756_length_457_cov_35.445498_g36054_i0reverse_frame_1 - 0.03 15.0 0.4 0.055 14.2 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2626) IBN_N PF03810.19 NODE_43750_length_457_cov_62.286730_g36048_i0forward_frame_1 - 0.18 11.7 0.2 22 5.1 0.1 2.2 2 0 0 2 2 2 0 Importin-beta N-terminal domain SNCAIP_SNCA_bd PF16700.5 NODE_43744_length_457_cov_70.684834_g36042_i0reverse_frame_1 - 0.042 13.6 0.3 7 6.5 0.1 2.4 2 0 0 2 2 2 0 Synphilin-1 alpha-Synuclein-binding domain KAAG1 PF15354.6 NODE_43734_length_457_cov_133.184834_g36032_i0forward_frame_1 - 0.07 13.7 0.1 0.11 13.0 0.1 1.2 1 0 0 1 1 1 0 Kidney-associated antigen 1 Spec3 PF15795.5 NODE_43721_length_457_cov_1231.215640_g36019_i0reverse_frame_1 - 2.3e-12 47.3 14.0 2.6e-06 27.8 8.9 2.2 2 0 0 2 2 2 2 Ectodermal ciliogenesis protein Bac_GDH PF05088.12 NODE_43713_length_458_cov_2.078014_g36014_i0reverse_frame_1 - 0.016 12.8 0.4 0.018 12.5 0.4 1.0 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase Herpes_Helicase PF02689.14 NODE_43713_length_458_cov_2.078014_g36014_i0reverse_frame_1 - 0.024 12.6 0.0 0.027 12.4 0.0 1.0 1 0 0 1 1 1 0 Helicase Plug PF07715.15 NODE_43711_length_458_cov_2.359338_g36012_i0forward_frame_1 - 3e-09 37.4 0.1 4.8e-09 36.7 0.1 1.4 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain TMEM40 PF15817.5 NODE_43701_length_458_cov_17.217494_g36002_i0forward_frame_1 - 0.57 10.0 3.4 0.86 9.4 3.3 1.4 1 1 0 1 1 1 0 Transmembrane protein 40 family GCP_C_terminal PF04130.13 NODE_43699_length_458_cov_44.976359_g36000_i0reverse_frame_1 - 0.13 11.7 0.2 0.13 11.7 0.2 1.5 2 0 0 2 2 2 0 Gamma tubulin complex component C-terminal FtsK_4TM PF13491.6 NODE_43694_length_458_cov_83.000000_g35995_i0forward_frame_1 - 0.13 12.0 1.3 0.16 11.6 1.3 1.1 1 0 0 1 1 1 0 4TM region of DNA translocase FtsK/SpoIIIE Arrestin_N PF00339.29 NODE_43688_length_458_cov_92.777778_g35989_i0reverse_frame_1 - 1.4e-06 28.4 0.1 1.7e-06 28.1 0.1 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 NODE_43688_length_458_cov_92.777778_g35989_i0reverse_frame_1 - 0.023 14.4 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 Arrestin_N terminal like Thioredoxin PF00085.20 NODE_43667_length_458_cov_211.021277_g35969_i0forward_frame_1 - 1.1e-07 31.7 0.0 1.8e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin DXP_redisom_C PF08436.12 NODE_43656_length_458_cov_28122.588652_g35960_i0forward_frame_1 - 0.12 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DXP_redisom_C PF08436.12 NODE_43655_length_458_cov_28122.609929_g35959_i0forward_frame_1 - 0.12 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DUF5068 PF16781.5 NODE_43645_length_459_cov_2.870283_g35949_i0forward_frame_1 - 0.11 12.3 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5068) DUF1572 PF07609.11 NODE_43625_length_459_cov_90.443396_g35931_i0reverse_frame_1 - 0.069 12.9 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) FAM194 PF14977.6 NODE_43618_length_459_cov_113.540094_g35924_i0forward_frame_1 - 0.024 14.0 0.0 0.03 13.6 0.0 1.1 1 0 0 1 1 1 0 FAM194 protein PPR_2 PF13041.6 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 1.6e-14 53.8 0.0 1e-06 28.8 0.0 3.2 1 1 3 4 4 4 4 PPR repeat family PPR_3 PF13812.6 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 3.1e-08 33.6 0.0 0.00021 21.3 0.0 2.2 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 3.2e-07 30.1 0.0 0.59 10.5 0.0 3.2 3 0 0 3 3 3 3 PPR repeat PPR_1 PF12854.7 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.0024 17.5 0.0 0.61 9.8 0.0 3.2 4 1 0 4 4 4 1 PPR repeat PPR_long PF17177.4 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.021 14.2 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP TPR_14 PF13428.6 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.023 15.5 4.8 0.64 11.0 0.0 3.0 2 2 1 3 3 3 0 Tetratricopeptide repeat Clathrin PF00637.20 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.087 12.7 0.0 4.3 7.2 0.0 2.5 1 1 0 1 1 1 0 Region in Clathrin and VPS HrpB1_HrpK PF09613.10 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.16 11.6 5.5 0.54 9.9 3.2 2.3 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) Prokineticin PF06607.11 NODE_43611_length_459_cov_171.259434_g35917_i0reverse_frame_1 - 1.7 9.0 7.1 0.3 11.4 0.4 2.1 1 1 1 2 2 2 0 Prokineticin Gly-rich_Ago1 PF12764.7 NODE_43583_length_460_cov_2.442353_g35893_i0reverse_frame_2 - 0.013 16.3 0.1 0.021 15.6 0.1 1.3 1 0 0 1 1 1 0 Glycine-rich region of argonaut KAR9 PF08580.10 NODE_43580_length_460_cov_3.320000_g35890_i0reverse_frame_2 - 0.83 8.1 2.7 0.85 8.1 2.7 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 zf-C3HC4_5 PF17121.5 NODE_43577_length_460_cov_4.988235_g35887_i0forward_frame_2 - 0.019 14.8 1.8 0.096 12.6 1.0 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF1601 PF07671.11 NODE_43577_length_460_cov_4.988235_g35887_i0forward_frame_2 - 0.12 12.2 0.1 12 5.8 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1601) PP2 PF14299.6 NODE_43576_length_460_cov_6.218824_g35886_i0forward_frame_3 - 0.019 15.0 0.1 0.027 14.5 0.1 1.3 1 0 0 1 1 1 0 Phloem protein 2 Endonuclease_1 PF04231.13 NODE_43576_length_460_cov_6.218824_g35886_i0forward_frame_3 - 0.076 12.7 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Endonuclease I Ofd1_CTDD PF10637.9 NODE_43568_length_460_cov_83.715294_g35878_i0reverse_frame_3 - 0.00049 19.5 0.0 0.00066 19.1 0.0 1.2 1 0 0 1 1 1 1 Oxoglutarate and iron-dependent oxygenase degradation C-term Bromo_coat PF01318.18 NODE_43567_length_460_cov_84.809412_g35877_i0reverse_frame_2 - 0.046 13.8 0.1 0.057 13.5 0.1 1.1 1 0 0 1 1 1 0 Bromovirus coat protein NCD1 PF04904.13 NODE_43567_length_460_cov_84.809412_g35877_i0forward_frame_2 - 0.089 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 NAB conserved region 1 (NCD1) DUF2304 PF10066.9 NODE_43566_length_460_cov_85.600000_g35876_i0reverse_frame_2 - 2.9 8.1 6.4 2.7 8.3 1.5 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Abhydrolase_1 PF00561.20 NODE_43564_length_460_cov_93.223529_g35874_i0reverse_frame_2 - 0.14 11.7 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold YCF90 PF17088.5 NODE_43556_length_460_cov_119.018824_g35866_i0reverse_frame_2 - 0.13 11.5 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family Ubiquitin_5 PF18037.1 NODE_43554_length_460_cov_145.101176_g35864_i0reverse_frame_3 - 0.27 11.6 3.1 4.1 7.8 0.0 3.0 3 0 0 3 3 3 0 Ubiquitin-like domain TAP35_44 PF07265.11 NODE_43552_length_460_cov_172.348235_g35862_i0reverse_frame_2 - 0.016 15.2 0.4 0.02 14.9 0.4 1.1 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 TnpV PF14198.6 NODE_43552_length_460_cov_172.348235_g35862_i0reverse_frame_2 - 0.022 14.7 0.4 0.022 14.7 0.4 2.3 1 1 1 2 2 2 0 Transposon-encoded protein TnpV UMPH-1 PF05822.12 NODE_43550_length_460_cov_233.270588_g35860_i0reverse_frame_3 - 1.5e-07 31.2 0.0 1.7e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 Pyrimidine 5'-nucleotidase (UMPH-1) NusB PF01029.18 NODE_43550_length_460_cov_233.270588_g35860_i0reverse_frame_3 - 0.22 11.8 0.0 0.33 11.2 0.0 1.2 1 0 0 1 1 1 0 NusB family Ndc1_Nup PF09531.10 NODE_43548_length_460_cov_345.562353_g35858_i0forward_frame_3 - 0.76 8.4 13.4 1 8.0 13.4 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Urm1 PF09138.11 NODE_43547_length_460_cov_447.416471_g35857_i0forward_frame_3 - 0.037 14.4 0.2 0.1 13.0 0.0 1.7 2 0 0 2 2 2 0 Urm1 (Ubiquitin related modifier) Flavin_Reduct PF01613.18 NODE_43546_length_460_cov_581.056471_g35856_i0reverse_frame_2 - 0.086 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Flavin reductase like domain EF-hand_1 PF00036.32 NODE_43539_length_460_cov_14167.338824_g34556_i2forward_frame_3 - 1e-05 24.7 0.1 2e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 NODE_43539_length_460_cov_14167.338824_g34556_i2forward_frame_3 - 0.00094 18.6 2.0 0.0013 18.2 0.1 2.1 2 1 1 3 3 3 1 EF hand EF-hand_6 PF13405.6 NODE_43539_length_460_cov_14167.338824_g34556_i2forward_frame_3 - 0.00094 18.9 0.0 0.0049 16.7 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 NODE_43539_length_460_cov_14167.338824_g34556_i2forward_frame_3 - 0.0013 19.1 0.2 0.0024 18.3 0.2 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_43539_length_460_cov_14167.338824_g34556_i2forward_frame_2 - 0.0026 17.2 0.2 0.0042 16.5 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_43539_length_460_cov_14167.338824_g34556_i2forward_frame_2 - 0.012 15.5 0.1 0.024 14.5 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_43539_length_460_cov_14167.338824_g34556_i2forward_frame_2 - 0.06 13.8 0.0 0.086 13.3 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair DUF4795 PF16043.5 NODE_43537_length_461_cov_1.690141_g35851_i0forward_frame_2 - 0.011 15.4 4.4 0.014 15.0 4.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF2192 PF09958.9 NODE_43537_length_461_cov_1.690141_g35851_i0forward_frame_2 - 0.021 14.3 2.6 0.026 14.1 2.6 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2192) RE_HpaII PF09561.10 NODE_43537_length_461_cov_1.690141_g35851_i0forward_frame_2 - 0.079 12.3 5.6 0.089 12.2 5.6 1.0 1 0 0 1 1 1 0 HpaII restriction endonuclease Polysacc_synt_3 PF13440.6 NODE_43536_length_461_cov_1.699531_g35850_i0forward_frame_3 - 8.3e-38 130.3 7.5 9.7e-38 130.0 7.5 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 NODE_43536_length_461_cov_1.699531_g35850_i0forward_frame_3 - 4.9e-13 49.1 8.6 5.7e-13 48.9 8.6 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein DUF1189 PF06691.11 NODE_43536_length_461_cov_1.699531_g35850_i0forward_frame_3 - 0.058 13.0 12.6 0.074 12.6 12.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) Yos1 PF08571.10 NODE_43535_length_461_cov_1.814554_g35849_i0forward_frame_3 - 0.049 13.9 0.4 0.089 13.1 0.4 1.4 1 1 0 1 1 1 0 Yos1-like RCC1_2 PF13540.6 NODE_43535_length_461_cov_1.814554_g35849_i0forward_frame_2 - 3.1e-06 26.8 0.2 3.1e-06 26.8 0.2 2.1 3 0 0 3 3 3 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_43535_length_461_cov_1.814554_g35849_i0forward_frame_2 - 7.3e-05 23.3 1.1 0.19 12.4 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat LTD PF00932.19 NODE_43535_length_461_cov_1.814554_g35849_i0forward_frame_2 - 0.08 13.3 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Lamin Tail Domain 7TM_GPCR_Sri PF10327.9 NODE_43532_length_461_cov_2.258216_g35846_i0reverse_frame_2 - 0.0054 16.0 7.7 0.014 14.6 4.7 2.0 1 1 1 2 2 2 2 Serpentine type 7TM GPCR chemoreceptor Sri Sarcoglycan_1 PF04790.13 NODE_43532_length_461_cov_2.258216_g35846_i0reverse_frame_2 - 0.0089 15.4 1.0 0.012 15.0 1.0 1.3 1 1 0 1 1 1 1 Sarcoglycan complex subunit protein DUF859 PF05895.12 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_3 - 0.006 15.1 0.0 0.0072 14.9 0.0 1.0 1 0 0 1 1 1 1 Siphovirus protein of unknown function (DUF859) MCM_N PF14551.6 NODE_43516_length_461_cov_47.992958_g35831_i0reverse_frame_3 - 0.19 12.3 4.4 1.8 9.2 0.2 2.2 2 0 0 2 2 2 0 MCM N-terminal domain LPP20 PF02169.16 NODE_43516_length_461_cov_47.992958_g35831_i0reverse_frame_3 - 0.21 12.0 4.1 6 7.3 0.2 2.2 2 0 0 2 2 2 0 LPP20 lipoprotein BCNT PF07572.12 NODE_43515_length_461_cov_63.899061_g35830_i0reverse_frame_2 - 3.1e-13 49.6 0.1 6.2e-13 48.6 0.1 1.5 1 0 0 1 1 1 1 Bucentaur or craniofacial development LEA_5 PF00477.17 NODE_43503_length_461_cov_86.305164_g35819_i0reverse_frame_3 - 0.061 13.8 1.7 0.21 12.1 0.2 2.0 1 1 0 2 2 2 0 Small hydrophilic plant seed protein MORN PF02493.20 NODE_43495_length_461_cov_106.328638_g35811_i0reverse_frame_2 - 7.3e-26 88.5 30.0 1.6e-05 24.5 3.5 6.1 6 0 0 6 6 6 6 MORN repeat PMT PF02366.18 NODE_43489_length_461_cov_175.039906_g35805_i0forward_frame_2 - 0.031 13.9 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase MORN PF02493.20 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 1.9e-15 55.7 33.1 7.1e-05 22.5 0.6 5.3 5 0 0 5 5 5 5 MORN repeat LIFR_N PF18207.1 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.0033 17.8 0.0 2.4 8.6 0.0 3.1 2 1 1 3 3 3 2 Leukemia inhibitory factor receptor N-terminal domain Sialidase PF02973.16 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.01 15.3 0.3 0.29 10.6 0.1 2.4 1 1 2 3 3 3 0 Sialidase, N-terminal domain Ntox27 PF15531.6 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.018 14.9 2.4 2.1 8.2 0.2 3.3 1 1 3 4 4 4 0 Bacterial toxin 27 Inhibitor_I36 PF03995.13 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.14 12.1 2.5 3.8 7.5 0.1 3.0 1 1 1 2 2 2 0 Peptidase inhibitor family I36 DUF3525 PF12039.8 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.2 10.3 0.0 11 4.6 0.0 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF3525) DUF2396 PF09654.10 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.36 10.9 1.7 61 3.7 0.0 3.2 1 1 1 3 3 3 0 Protein of unknown function (DUF2396) DUF1419 PF07215.11 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 1.7 8.7 3.4 52 4.0 0.1 3.7 1 1 4 5 5 5 0 Protein of unknown function (DUF1419) PHINT_rpt PF14882.6 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 8 6.8 6.9 75 3.7 0.0 3.9 5 0 0 5 5 5 0 Phage-integrase repeat unit HTH_50 PF18024.1 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_2 - 0.076 12.6 0.0 0.2 11.3 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain ig PF00047.25 NODE_43479_length_461_cov_1534.969484_g35795_i0forward_frame_3 - 0.061 13.5 0.1 0.1 12.8 0.1 1.4 1 0 0 1 1 1 0 Immunoglobulin domain Tctex-1 PF03645.13 NODE_43478_length_461_cov_1989.276995_g35794_i0reverse_frame_3 - 5e-21 74.9 0.1 6.4e-21 74.5 0.1 1.2 1 0 0 1 1 1 1 Tctex-1 family DUF1854 PF08909.11 NODE_43478_length_461_cov_1989.276995_g35794_i0reverse_frame_3 - 0.039 13.8 0.0 0.42 10.4 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1854) EF-hand_1 PF00036.32 NODE_43474_length_461_cov_14134.011737_g34556_i1forward_frame_3 - 9.9e-06 24.8 0.1 2e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_43474_length_461_cov_14134.011737_g34556_i1forward_frame_3 - 0.00092 19.0 0.0 0.0049 16.7 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 NODE_43474_length_461_cov_14134.011737_g34556_i1forward_frame_3 - 0.00093 18.6 2.0 0.0013 18.2 0.1 2.1 2 1 1 3 3 3 1 EF hand EF-hand_7 PF13499.6 NODE_43474_length_461_cov_14134.011737_g34556_i1forward_frame_3 - 0.0013 19.2 0.2 0.0024 18.3 0.2 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_43474_length_461_cov_14134.011737_g34556_i1forward_frame_2 - 0.0026 17.2 0.2 0.0042 16.5 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_43474_length_461_cov_14134.011737_g34556_i1forward_frame_2 - 0.011 15.6 0.1 0.024 14.5 0.1 1.5 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_43474_length_461_cov_14134.011737_g34556_i1forward_frame_2 - 0.06 13.8 0.0 0.086 13.3 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair Kelch_1 PF01344.25 NODE_43473_length_461_cov_45110.349765_g35791_i0reverse_frame_3 - 7e-05 22.3 0.4 0.015 14.8 0.1 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_43473_length_461_cov_45110.349765_g35791_i0reverse_frame_3 - 0.0022 18.2 0.2 0.007 16.6 0.1 1.7 2 0 0 2 2 2 1 Kelch motif PRC2_HTH_1 PF18118.1 NODE_43471_length_462_cov_1.906323_g35789_i0reverse_frame_2 - 0.27 12.1 0.3 0.64 10.9 0.0 1.6 2 0 0 2 2 2 0 Polycomb repressive complex 2 tri-helical domain DUF2039 PF10217.9 NODE_43470_length_462_cov_1.915691_g35788_i0reverse_frame_3 - 0.043 14.2 0.3 0.064 13.6 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) Ephrin_rec_like PF07699.13 NODE_43470_length_462_cov_1.915691_g35788_i0reverse_frame_3 - 0.092 12.5 0.2 0.22 11.3 0.2 1.6 1 0 0 1 1 1 0 Putative ephrin-receptor like HK PF02110.15 NODE_43469_length_462_cov_2.213115_g35787_i0forward_frame_3 - 0.088 12.2 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Hydroxyethylthiazole kinase family Peptidase_M13_N PF05649.13 NODE_43462_length_462_cov_3.264637_g35780_i0reverse_frame_2 - 0.013 15.2 0.2 0.014 15.2 0.2 1.1 1 0 0 1 1 1 0 Peptidase family M13 Tox-SGS PF15651.6 NODE_43459_length_462_cov_4.833724_g35777_i0reverse_frame_3 - 0.037 14.2 0.3 0.057 13.7 0.3 1.4 1 0 0 1 1 1 0 Salivary glad secreted protein domain toxin DUF569 PF04601.13 NODE_43457_length_462_cov_60.599532_g35775_i0reverse_frame_2 - 0.034 13.8 0.4 2.3 7.9 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF569) ArabFuran-catal PF09206.11 NODE_43457_length_462_cov_60.599532_g35775_i0forward_frame_2 - 0.22 10.8 0.1 0.25 10.6 0.1 1.2 1 0 0 1 1 1 0 Alpha-L-arabinofuranosidase B, catalytic Chloroa_b-bind PF00504.21 NODE_43456_length_462_cov_65.210773_g35774_i0reverse_frame_3 - 7.2e-20 72.1 0.0 9.9e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Ank_4 PF13637.6 NODE_43455_length_462_cov_67.444965_g35773_i0forward_frame_3 - 1.6e-18 66.8 0.3 5.4e-11 42.8 0.0 2.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_43455_length_462_cov_67.444965_g35773_i0forward_frame_3 - 2.9e-12 47.0 0.2 8.6e-09 35.9 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_43455_length_462_cov_67.444965_g35773_i0forward_frame_3 - 1.8e-11 44.0 0.2 6.6e-10 39.1 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_43455_length_462_cov_67.444965_g35773_i0forward_frame_3 - 2.9e-11 42.5 0.0 0.0007 19.9 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 NODE_43455_length_462_cov_67.444965_g35773_i0forward_frame_3 - 0.00011 22.5 2.3 0.13 12.8 0.0 3.6 4 0 0 4 4 4 1 Ankyrin repeat GLTT PF01744.20 NODE_43446_length_462_cov_95.786885_g35764_i0reverse_frame_3 - 9.5e-05 22.0 2.4 0.014 15.1 1.9 2.1 1 1 1 2 2 2 2 GLTT repeat (6 copies) GLTT PF01744.20 NODE_43446_length_462_cov_95.786885_g35764_i0forward_frame_3 - 0.013 15.2 0.4 0.15 11.9 0.1 2.7 1 1 1 2 2 2 0 GLTT repeat (6 copies) Pentapeptide PF00805.22 NODE_43446_length_462_cov_95.786885_g35764_i0forward_frame_2 - 0.00018 21.1 0.2 0.0003 20.3 0.2 1.4 1 0 0 1 1 1 1 Pentapeptide repeats (8 copies) Glyco_transf_10 PF00852.19 NODE_43442_length_462_cov_106.131148_g35760_i0forward_frame_3 - 1.9e-05 24.5 0.0 3e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 10 (fucosyltransferase) C-term DHHC PF01529.20 NODE_43439_length_462_cov_116.215457_g35757_i0reverse_frame_3 - 0.097 12.8 2.4 0.16 12.1 2.4 1.4 1 0 0 1 1 1 0 DHHC palmitoyltransferase OAD_gamma PF04277.13 NODE_43439_length_462_cov_116.215457_g35757_i0forward_frame_3 - 0.024 15.2 0.1 0.064 13.8 0.0 1.7 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks144.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks144.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks144.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks144.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_S10 PF00338.22 NODE_43413_length_462_cov_1745.316159_g35732_i0reverse_frame_2 - 1.7e-26 92.3 0.0 2.3e-26 91.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e IL17 PF06083.11 NODE_43412_length_462_cov_2782.981265_g35731_i0reverse_frame_2 - 0.0078 16.7 1.5 0.016 15.6 1.5 1.5 1 0 0 1 1 1 1 Interleukin-17 MFS_1_like PF12832.7 NODE_43412_length_462_cov_2782.981265_g35731_i0forward_frame_3 - 0.0077 15.1 2.0 0.013 14.4 2.0 1.4 1 1 0 1 1 1 1 MFS_1 like family YqzM PF14141.6 NODE_43412_length_462_cov_2782.981265_g35731_i0forward_frame_3 - 0.05 13.7 1.0 0.22 11.6 1.0 2.1 1 0 0 1 1 1 0 YqzM-like protein DUF3671 PF12420.8 NODE_43412_length_462_cov_2782.981265_g35731_i0forward_frame_3 - 0.3 11.2 4.2 0.7 10.0 4.2 1.8 1 1 0 1 1 1 0 Protein of unknown function DSPc PF00782.20 ORF99536 - 3.4e-32 111.0 0.1 3.9e-32 110.8 0.1 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF99536 - 8.8e-05 22.2 0.1 0.00017 21.3 0.1 1.4 1 1 0 1 1 1 1 Protein-tyrosine phosphatase DUF3834 PF12916.7 ORF99536 - 0.00061 19.1 0.1 0.00076 18.8 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3834) PTPlike_phytase PF14566.6 ORF99536 - 0.011 15.8 0.0 0.018 15.2 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate Y_phosphatase3 PF13350.6 ORF99536 - 0.012 15.6 0.1 0.028 14.4 0.1 1.7 1 1 0 1 1 1 0 Tyrosine phosphatase family Glyoxalase_4 PF13669.6 ORF99536 - 0.079 13.2 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Init_tRNA_PT PF04179.12 ORF99536 - 0.18 12.1 0.0 0.41 11.0 0.0 1.5 1 1 0 1 1 1 0 Rit1 DUSP-like domain Nipped-B_C PF12830.7 ORF97782 - 0.063 13.2 0.5 0.094 12.7 0.5 1.2 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus MSG PF02349.15 ORF97782 - 1.2 9.3 5.4 0.18 12.0 1.3 1.8 2 1 0 2 2 2 0 Major surface glycoprotein HycA_repressor PF11046.8 ORF97166 - 3.6e-75 251.1 1.0 4e-75 250.9 1.0 1.0 1 0 0 1 1 1 1 Transcriptional repressor of hyc and hyp operons RNA_pol_Rpb2_45 PF10385.9 ORF97166 - 0.12 12.7 0.0 0.49 10.7 0.0 1.9 2 0 0 2 2 2 0 RNA polymerase beta subunit external 1 domain COX1 PF00115.20 ORF96610 - 7.6e-19 67.9 16.3 9.7e-19 67.5 16.3 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF2631 PF10939.8 ORF96610 - 0.01 15.7 0.5 0.079 12.8 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2631) GCV_H PF01597.19 ORF96563 - 2.3e-35 121.2 0.0 2.7e-35 120.9 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 ORF96563 - 0.0025 17.6 0.1 0.0067 16.2 0.0 1.8 2 1 0 2 2 2 1 Biotin-requiring enzyme zf-RRN7 PF11781.8 ORF9575 - 0.022 14.4 0.4 0.038 13.7 0.4 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Sdh_cyt PF01127.22 ORF95647 - 0.12 12.4 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF3145 PF11343.8 ORF94070 - 0.048 13.2 0.1 0.064 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3145) HELP PF03451.14 ORF93983 - 2.4e-14 52.9 0.0 3.3e-14 52.5 0.0 1.2 1 0 0 1 1 1 1 HELP motif Me-amine-dh_H PF06433.11 ORF93983 - 0.13 11.1 0.0 0.21 10.4 0.0 1.4 2 0 0 2 2 2 0 Methylamine dehydrogenase heavy chain (MADH) Jun PF03957.13 ORF93734 - 0.043 13.7 0.0 0.052 13.4 0.0 1.2 1 0 0 1 1 1 0 Jun-like transcription factor Peptidase_C1 PF00112.23 ORF90823 - 7.3e-21 75.3 3.4 8.8e-21 75.0 3.4 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF90823 - 2.9e-05 23.1 0.2 3.3e-05 22.9 0.2 1.2 1 0 0 1 1 1 1 Peptidase C1-like family SET PF00856.28 ORF89841 - 1.8e-07 31.7 0.0 2.5e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 SET domain Laminin_B PF00052.18 ORF87679 - 0.00022 21.1 0.0 0.00033 20.6 0.0 1.3 1 0 0 1 1 1 1 Laminin B (Domain IV) Arch_fla_DE PF04659.13 ORF87679 - 0.093 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Archaeal flagella protein FAM75 PF14650.6 ORF87146 - 0.21 11.1 12.5 0.26 10.8 12.5 1.1 1 0 0 1 1 1 0 FAM75 family EIF4E-T PF10477.9 ORF87146 - 0.64 8.8 6.5 0.7 8.7 6.5 1.0 1 0 0 1 1 1 0 Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E TFIIA PF03153.13 ORF84658 - 2.3 8.2 7.6 2.6 8.0 7.6 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit ubiquitin PF00240.23 ORF84217 - 2.5e-56 187.3 5.6 4.4e-33 112.8 0.9 2.0 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF84217 - 5.5e-23 80.6 9.1 2e-15 56.4 1.4 2.0 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF84217 - 3.1e-09 37.1 3.0 0.00016 22.1 0.2 3.4 2 2 0 2 2 2 2 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF84217 - 5.5e-06 26.4 6.7 2.2 8.4 0.2 4.0 3 1 1 4 4 4 4 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF84217 - 1.8e-05 24.6 0.4 0.0069 16.3 0.1 2.2 2 0 0 2 2 2 2 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF84217 - 2.7e-05 24.2 0.3 0.031 14.4 0.1 2.9 2 2 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF84217 - 6.9e-05 23.1 0.9 0.018 15.4 0.1 2.2 2 0 0 2 2 2 2 Ubiquitin-like domain Blt1 PF12754.7 ORF84217 - 0.0015 18.9 1.1 0.053 13.8 0.2 2.1 1 1 0 2 2 2 1 Blt1 N-terminal domain DUF2407 PF10302.9 ORF84217 - 0.0017 18.9 0.4 0.071 13.7 0.0 2.2 1 1 0 2 2 2 1 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF84217 - 0.0081 16.0 0.0 0.93 9.3 0.0 2.1 2 0 0 2 2 2 1 Silencing defective 2 N-terminal ubiquitin domain H2TH PF06831.14 ORF8193 - 2.7e-11 43.3 0.0 3.7e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain zf-FPG_IleRS PF06827.14 ORF8193 - 7.6e-09 35.3 3.7 1.3e-08 34.6 3.7 1.4 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS DUF4351 PF14261.6 ORF8193 - 0.067 13.3 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4351) Zn-ribbon_8 PF09723.10 ORF8193 - 0.12 12.6 0.7 0.18 12.0 0.7 1.4 1 0 0 1 1 1 0 Zinc ribbon domain FbpA PF05833.11 ORF8193 - 0.17 10.6 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) DUF179 PF02622.15 ORF80695 - 1e-36 126.3 0.0 1.2e-36 126.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 DUF4141 PF13605.6 ORF80695 - 0.14 11.5 0.1 0.22 10.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4141) Hol_Tox PF16935.5 ORF80593 - 0.14 12.2 0.0 8.2 6.6 0.0 2.2 2 0 0 2 2 2 0 Putative Holin-like Toxin (Hol-Tox) TsaE PF02367.17 ORF80452 - 2e-42 144.1 0.0 2.4e-42 143.8 0.0 1.0 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 ORF80452 - 0.0094 16.1 0.0 0.012 15.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF80452 - 0.016 15.6 0.0 0.022 15.1 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_22 PF13401.6 ORF80452 - 0.027 14.8 0.0 0.034 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 ORF80452 - 0.094 12.8 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 ORF80452 - 0.097 11.9 0.0 0.24 10.6 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin PRK PF00485.18 ORF80452 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_23 PF13476.6 ORF80452 - 0.15 12.6 0.0 0.18 12.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF80452 - 0.15 12.4 0.0 0.2 12.0 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 ORF80452 - 0.18 11.7 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AFG1_ATPase PF03969.16 ORF80452 - 0.2 10.5 0.0 0.26 10.2 0.0 1.1 1 0 0 1 1 1 0 AFG1-like ATPase AAA_13 PF13166.6 ORF80452 - 0.23 10.1 0.0 0.27 9.8 0.0 1.0 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF80452 - 0.25 11.0 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain COX1 PF00115.20 ORF80164 - 7.6e-19 67.9 16.3 9.7e-19 67.5 16.3 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF2631 PF10939.8 ORF80164 - 0.01 15.7 0.5 0.079 12.8 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2631) DUF1295 PF06966.12 ORF79998 - 7.8e-41 140.1 0.0 8.7e-41 140.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF79998 - 3.9e-06 26.9 0.1 4.9e-06 26.6 0.1 1.3 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF79998 - 1.3e-05 25.5 0.1 3.6e-05 24.1 0.1 1.7 1 1 1 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF79998 - 6.3e-05 23.3 0.2 0.00011 22.5 0.2 1.5 1 1 0 1 1 1 1 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF79998 - 0.00042 19.2 0.2 0.00077 18.3 0.2 1.5 1 1 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family SabA_adhesion PF18304.1 ORF79998 - 0.28 10.4 0.0 0.49 9.6 0.0 1.3 2 0 0 2 2 2 0 SabA N-terminal extracellular adhesion domain TEX12 PF15219.6 ORF79429 - 0.013 15.8 0.0 0.022 15.1 0.0 1.4 1 0 0 1 1 1 0 Testis-expressed 12 COX1 PF00115.20 ORF78884 - 7.6e-19 67.9 16.3 9.7e-19 67.5 16.3 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF2631 PF10939.8 ORF78884 - 0.01 15.7 0.5 0.079 12.8 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2631) Peptidase_S55 PF05580.12 ORF75280 - 0.0035 17.3 1.5 0.0042 17.0 1.5 1.1 1 0 0 1 1 1 1 SpoIVB peptidase S55 MatE PF01554.18 ORF7506 - 0.0062 16.2 18.8 0.0088 15.7 6.5 2.8 3 0 0 3 3 3 2 MatE Sarcoglycan_1 PF04790.13 ORF7506 - 5.8 6.2 8.3 0.28 10.5 2.8 1.6 2 0 0 2 2 2 0 Sarcoglycan complex subunit protein SNAP PF14938.6 ORF7423 - 5.9e-44 150.6 0.0 6.5e-44 150.5 0.0 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP Pentapeptide PF00805.22 ORF7423 - 0.11 12.2 0.4 0.43 10.3 0.1 1.9 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) TEX12 PF15219.6 ORF7384 - 0.012 15.9 0.1 0.019 15.3 0.1 1.3 1 0 0 1 1 1 0 Testis-expressed 12 Phosphorylase PF00343.20 ORF73014 - 2e-55 188.4 0.1 2.2e-55 188.2 0.1 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase Bestrophin PF01062.21 ORF7285 - 4.3e-05 23.0 0.0 5.8e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel RskA PF10099.9 ORF7285 - 0.054 13.8 0.0 0.054 13.8 0.0 2.0 2 0 0 2 2 2 0 Anti-sigma-K factor rskA Cupin_8 PF13621.6 ORF71572 - 5.2e-11 42.8 0.1 7.2e-11 42.3 0.1 1.2 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF71572 - 2.5e-06 27.2 0.0 2.8e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Cupin superfamily protein Cupin_1 PF00190.22 ORF71572 - 0.011 15.3 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 Cupin Cupin_2 PF07883.11 ORF71572 - 0.015 15.0 0.0 0.025 14.3 0.0 1.3 1 0 0 1 1 1 0 Cupin domain DUF3209 PF11483.8 ORF71572 - 0.13 12.7 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3209) DGOK PF05035.12 ORF70892 - 8.1e-33 113.5 0.0 9.3e-33 113.3 0.0 1.0 1 0 0 1 1 1 1 2-keto-3-deoxy-galactonokinase CSD PF00313.22 ORF7014 - 3.7e-06 26.7 0.7 5.8e-06 26.1 0.7 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain SLD5_C PF16922.5 ORF69595 - 0.17 12.1 0.0 0.27 11.5 0.0 1.3 1 0 0 1 1 1 0 DNA replication complex GINS protein SLD5 C-terminus WD40_3 PF15911.5 ORF69333 - 0.17 11.9 0.1 0.29 11.1 0.1 1.3 1 0 0 1 1 1 0 WD domain, G-beta repeat Sirohm_synth_M PF14824.6 ORF68995 - 0.094 12.2 1.4 0.15 11.5 0.1 1.9 2 0 0 2 2 2 0 Sirohaem biosynthesis protein central FAM183 PF14886.6 ORF68331 - 0.0037 18.0 0.2 0.0068 17.1 0.2 1.6 1 1 0 1 1 1 1 FAM183A and FAM183B related LLC1 PF14945.6 ORF68331 - 0.024 15.2 1.7 0.13 12.8 1.7 2.0 1 1 0 1 1 1 0 Normal lung function maintenance, Low in Lung Cancer 1 protein WD40 PF00400.32 ORF67553 - 7.5e-05 23.4 0.1 0.00091 20.0 0.0 2.5 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF67553 - 0.2 12.0 0.0 0.53 10.6 0.0 1.7 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain LVIVD PF08309.11 ORF65670 - 0.062 12.6 0.1 0.12 11.8 0.1 1.4 1 0 0 1 1 1 0 LVIVD repeat DUF1806 PF08830.10 ORF65670 - 0.11 12.5 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1806) TRAP-gamma PF07074.12 ORF65494 - 0.029 13.9 0.1 0.044 13.3 0.1 1.3 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) PHINT_rpt PF14882.6 ORF65494 - 0.076 13.3 1.6 0.13 12.5 0.6 1.9 2 0 0 2 2 2 0 Phage-integrase repeat unit Deltameth_res PF16020.5 ORF65494 - 3 7.8 5.7 2 8.4 0.1 2.8 2 1 0 2 2 2 0 Deltamethrin resistance MBDa PF16564.5 ORF65263 - 0.014 15.6 0.5 0.029 14.5 0.5 1.5 1 0 0 1 1 1 0 p55-binding region of Methyl-CpG-binding domain proteins MBD Ank_2 PF12796.7 ORF6480 - 3.3e-13 50.0 0.3 3e-07 30.9 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF6480 - 4.2e-12 45.1 0.0 0.033 14.7 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF6480 - 5.1e-12 46.1 0.0 5.7e-05 23.6 0.0 3.0 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF6480 - 1.1e-07 32.0 0.9 0.67 10.5 0.0 3.8 4 1 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF6480 - 4.9e-07 29.9 0.0 0.032 14.6 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeats (many copies) SHIPPO-rpt PF07004.12 ORF61839 - 2.6e-07 31.2 3.9 0.5 11.4 0.0 3.6 3 0 0 3 3 3 3 Sperm-tail PG-rich repeat DUF2070 PF09843.9 ORF6096 - 6.5 4.9 11.9 7 4.8 11.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Herpes_BLRF2 PF05812.12 ORF60825 - 0.23 11.6 4.2 0.18 11.9 3.1 1.4 2 0 0 2 2 2 0 Herpesvirus BLRF2 protein SHIPPO-rpt PF07004.12 ORF60190 - 2.6e-07 31.2 3.9 0.5 11.4 0.0 3.6 3 0 0 3 3 3 3 Sperm-tail PG-rich repeat HATPase_c PF02518.26 ORF58799 - 2.7e-14 53.6 0.0 4e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF58799 - 0.16 11.8 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ubiquitin PF00240.23 ORF5868 - 5.5e-66 218.3 7.8 4.4e-33 112.8 0.9 2.0 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF5868 - 6.3e-31 106.0 9.2 2e-15 56.4 1.4 2.0 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF5868 - 9e-12 45.3 2.5 0.00016 22.1 0.2 3.3 2 2 0 2 2 2 2 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF5868 - 1.9e-08 34.1 0.8 0.0053 16.7 0.1 2.2 2 0 0 2 2 2 2 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF5868 - 5.5e-07 29.9 1.2 0.018 15.4 0.1 2.1 2 0 0 2 2 2 2 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF5868 - 6.6e-07 29.4 0.4 0.031 14.4 0.1 2.8 2 2 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF5868 - 5.8e-06 26.3 9.1 2.2 8.4 0.2 4.0 4 0 0 4 4 4 4 Ubiquitin-like domain DUF2407 PF10302.9 ORF5868 - 1.3e-05 25.7 0.2 0.062 13.9 0.0 2.2 1 1 0 2 2 2 2 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF5868 - 0.00036 20.4 0.1 0.74 9.6 0.0 2.1 1 1 1 2 2 2 2 Silencing defective 2 N-terminal ubiquitin domain DUF2870 PF11069.8 ORF5868 - 0.011 16.1 0.1 9.4 6.7 0.0 2.8 2 2 1 3 3 3 0 Protein of unknown function (DUF2870) DUF3861 PF12977.7 ORF5868 - 0.051 13.8 0.4 10 6.4 0.1 2.2 1 1 1 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3861) UDP-g_GGTase PF06427.11 ORF5868 - 0.12 12.5 0.8 1.3 9.2 0.1 2.4 3 0 0 3 3 3 0 UDP-glucose:Glycoprotein Glucosyltransferase TmoB PF06234.12 ORF5868 - 0.12 12.4 1.9 14 5.9 0.1 2.7 2 2 0 2 2 2 0 Toluene-4-monooxygenase system protein B (TmoB) FlgD_ig PF13860.6 ORF5868 - 0.16 11.8 1.2 20 5.2 0.1 2.4 2 0 0 2 2 2 0 FlgD Ig-like domain FERM_f0 PF16511.5 ORF5868 - 0.22 11.8 1.8 29 5.1 0.1 3.2 2 2 0 2 2 2 0 N-terminal or F0 domain of Talin-head FERM Shisa PF13908.6 ORF58412 - 2.2e-07 31.3 0.7 2.2e-07 31.3 0.7 1.5 1 1 0 2 2 2 1 Wnt and FGF inhibitory regulator TMEM154 PF15102.6 ORF58412 - 3.7e-06 26.9 5.9 5e-06 26.5 5.9 1.4 1 1 0 1 1 1 1 TMEM154 protein family Rax2 PF12768.7 ORF58412 - 4.5e-05 23.0 0.1 5.4e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Cortical protein marker for cell polarity DUF1180 PF06679.12 ORF58412 - 5.5e-05 23.6 0.5 6.7e-05 23.4 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1180) TMEM51 PF15345.6 ORF58412 - 0.00023 21.1 0.5 0.00029 20.7 0.5 1.1 1 0 0 1 1 1 1 Transmembrane protein 51 PIRT PF15099.6 ORF58412 - 0.00061 19.4 0.6 0.00092 18.8 0.6 1.2 1 0 0 1 1 1 1 Phosphoinositide-interacting protein family RIFIN PF02009.16 ORF58412 - 0.00077 19.4 0.0 0.00094 19.2 0.0 1.1 1 0 0 1 1 1 1 Rifin Peptidase_M56 PF05569.11 ORF58412 - 0.00083 18.6 0.1 0.00098 18.4 0.1 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 SLAC1 PF03595.17 ORF58412 - 0.0059 15.9 0.0 0.0066 15.8 0.0 1.2 1 0 0 1 1 1 1 Voltage-dependent anion channel Protocadherin PF08374.11 ORF58412 - 0.006 16.6 0.2 0.0078 16.2 0.2 1.2 1 0 0 1 1 1 1 Protocadherin Orf78 PF06024.12 ORF58412 - 0.0061 16.8 0.1 0.0099 16.2 0.1 1.3 1 0 0 1 1 1 1 Orf78 (ac78) ABC2_membrane_3 PF12698.7 ORF58412 - 0.0084 15.3 2.4 0.0093 15.1 2.4 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein EphA2_TM PF14575.6 ORF58412 - 0.012 16.5 0.2 0.038 14.9 0.1 1.8 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain TMEM100 PF16311.5 ORF58412 - 0.02 14.5 1.2 0.029 13.9 0.3 1.7 1 1 1 2 2 2 0 Transmembrane protein 100 PRIMA1 PF16101.5 ORF58412 - 0.028 14.4 0.2 0.041 13.9 0.2 1.4 1 1 0 1 1 1 0 Proline-rich membrane anchor 1 TAS2R PF05296.13 ORF58412 - 0.048 12.8 0.3 0.061 12.4 0.3 1.2 1 0 0 1 1 1 0 Taste receptor protein (TAS2R) Insulin_TMD PF17870.1 ORF58412 - 0.049 13.7 0.8 0.078 13.1 0.8 1.3 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment DUF4381 PF14316.6 ORF58412 - 0.057 13.7 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Plasmodium_Vir PF05795.11 ORF58412 - 0.083 12.3 2.2 0.087 12.2 2.2 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein Hum_adeno_E3A PF05393.11 ORF58412 - 0.14 12.2 6.6 3.4 7.7 0.4 2.3 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein Glycophorin_A PF01102.18 ORF58412 - 0.16 12.2 2.7 0.29 11.4 2.7 1.4 1 1 0 1 1 1 0 Glycophorin A Podoplanin PF05808.11 ORF58412 - 0.26 11.4 7.6 0.43 10.7 7.6 1.4 1 0 0 1 1 1 0 Podoplanin DUF5305 PF17231.2 ORF58412 - 0.35 10.3 7.0 0.73 9.2 7.0 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5305) DUF5383 PF17355.2 ORF58412 - 0.46 10.9 3.0 0.13 12.6 0.4 1.4 2 0 0 2 2 1 0 Family of unknown function (DUF5383) TRP PF06011.12 ORF58412 - 4.9 5.8 8.6 0.32 9.7 2.1 1.8 1 1 1 2 2 2 0 Transient receptor potential (TRP) ion channel UQ_con PF00179.26 ORF57085 - 3.2e-49 166.2 0.2 3.7e-49 166.0 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF57085 - 0.0023 18.2 0.1 0.0031 17.8 0.1 1.3 1 0 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 ORF57085 - 0.0063 16.2 0.0 0.0069 16.1 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B UFC1 PF08694.11 ORF57085 - 0.031 13.9 0.3 0.047 13.3 0.3 1.5 1 1 0 1 1 1 0 Ubiquitin-fold modifier-conjugating enzyme 1 Phage_r1t_holin PF16945.5 ORF57085 - 0.2 11.8 0.1 0.31 11.3 0.1 1.2 1 0 0 1 1 1 0 Putative lactococcus lactis phage r1t holin Esterase_phd PF10503.9 ORF56432 - 0.2 11.1 5.7 0.23 10.9 5.7 1.2 1 0 0 1 1 1 0 Esterase PHB depolymerase DUF3040 PF11239.8 ORF55168 - 0.31 11.3 1.2 20 5.5 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) p450 PF00067.22 ORF53621 - 6.1e-31 107.7 0.1 7.5e-31 107.4 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 SRP72 PF08492.12 ORF53621 - 0.063 13.7 0.4 0.097 13.1 0.4 1.3 1 0 0 1 1 1 0 SRP72 RNA-binding domain CENP-H PF05837.12 ORF52553 - 2.9 8.3 9.4 1.1 9.7 3.9 2.2 2 0 0 2 2 2 0 Centromere protein H (CENP-H) COX1 PF00115.20 ORF51704 - 7.6e-19 67.9 16.3 9.7e-19 67.5 16.3 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF2631 PF10939.8 ORF51704 - 0.01 15.7 0.5 0.079 12.8 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2631) DUF4706 PF15797.5 ORF49336 - 0.097 13.2 0.0 0.15 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4706) DUF2890 PF11081.8 ORF48851 - 0.031 14.4 0.8 0.24 11.5 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2890) Brix PF04427.18 ORF47711 - 1e-24 87.7 0.1 1.2e-24 87.5 0.1 1.1 1 0 0 1 1 1 1 Brix domain MFS_2 PF13347.6 ORF47612 - 9.6e-06 24.4 1.9 1.1e-05 24.1 1.9 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein TRP PF06011.12 ORF47612 - 0.0042 15.9 0.5 0.0051 15.6 0.5 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel MFS_1 PF07690.16 ORF47612 - 0.0046 15.9 2.1 0.0058 15.6 2.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily YfhO PF09586.10 ORF47612 - 0.009 14.3 0.1 0.01 14.1 0.1 1.0 1 0 0 1 1 1 1 Bacterial membrane protein YfhO Na_H_antiport_3 PF07399.11 ORF47612 - 0.013 14.4 1.0 0.015 14.2 1.0 1.1 1 0 0 1 1 1 0 Putative Na+/H+ antiporter DUF5423 PF17461.2 ORF47612 - 0.09 11.6 0.2 0.11 11.4 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) DUF1230 PF06799.11 ORF47612 - 0.31 11.1 2.9 0.23 11.6 1.2 1.6 1 1 1 2 2 2 0 Conserved in the green lineage and diatoms 27 LapA_dom PF06305.11 ORF47612 - 0.53 10.1 0.1 0.53 10.1 0.1 2.2 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain COX14 PF14880.6 ORF47612 - 1 9.3 0.0 1 9.3 0.0 2.4 4 0 0 4 4 4 0 Cytochrome oxidase c assembly DUF1129 PF06570.11 ORF47612 - 1.5 8.3 7.1 0.64 9.5 0.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) DUF2070 PF09843.9 ORF47612 - 2.9 6.1 5.1 3.7 5.7 5.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) pKID PF02173.17 ORF45587 - 0.83 9.2 4.1 1.5 8.3 4.1 1.4 1 0 0 1 1 1 0 pKID domain His_Phos_2 PF00328.22 ORF44666 - 0.033 13.5 0.5 0.034 13.5 0.5 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) Arginase PF00491.21 ORF43346 - 2.7e-33 115.7 0.0 3.1e-33 115.5 0.0 1.0 1 0 0 1 1 1 1 Arginase family CENP-B_N PF04218.13 ORF43332 - 0.15 11.8 0.9 6.5 6.5 0.0 2.5 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain DUF1003 PF06210.11 ORF43332 - 0.51 10.5 6.1 0.2 11.8 3.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1003) TP53IP5 PF15331.6 ORF43332 - 0.55 10.4 5.0 0.63 10.2 5.0 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 Ras PF00071.22 ORF42703 - 2.1e-32 112.0 0.0 2.3e-32 111.8 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF42703 - 1.4e-16 60.8 0.0 1.8e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF42703 - 2.8e-07 30.1 0.0 3.5e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SASRP1 PF15160.6 ORF42703 - 0.097 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 DdrB PF12747.7 ORF4227 - 0.062 13.1 2.0 0.16 11.8 0.4 1.9 2 0 0 2 2 2 0 DdrB-like protein PPP4R2 PF09184.11 ORF4227 - 0.21 11.2 26.7 0.25 10.9 26.7 1.1 1 0 0 1 1 1 0 PPP4R2 CDC27 PF09507.10 ORF4227 - 0.52 9.7 27.6 0.67 9.3 27.6 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Peptidase_C58 PF03543.14 ORF4227 - 1.3 8.7 11.0 0.057 13.1 4.3 1.8 1 1 1 2 2 2 0 Yersinia/Haemophilus virulence surface antigen TFIIA PF03153.13 ORF4227 - 1.6 8.6 28.5 1.9 8.4 28.5 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Nop14 PF04147.12 ORF4227 - 2.3 6.3 25.3 2.5 6.2 25.3 1.2 1 0 0 1 1 1 0 Nop14-like family Nucleo_P87 PF07267.11 ORF4227 - 8.7 5.1 13.4 11 4.7 13.4 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 HATPase_c PF02518.26 ORF41552 - 1.1e-15 58.0 0.1 1.6e-15 57.6 0.1 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IGF2_C PF08365.11 ORF4092 - 2.5 8.2 9.0 1.1 9.4 0.2 2.5 2 0 0 2 2 2 0 Insulin-like growth factor II E-peptide DUF4795 PF16043.5 ORF39427 - 0.0009 18.9 13.7 0.0012 18.5 13.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) Baculo_PEP_C PF04513.12 ORF39427 - 0.027 14.5 8.2 0.029 14.4 3.4 2.1 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MbeD_MobD PF04899.12 ORF39427 - 0.028 14.5 1.4 0.028 14.5 1.4 2.4 2 1 0 2 2 2 0 MbeD/MobD like DUF1664 PF07889.12 ORF39427 - 0.1 12.7 11.9 0.039 14.0 8.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) ApoLp-III PF07464.11 ORF39427 - 0.11 12.6 14.5 0.27 11.3 14.5 1.6 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DUF3347 PF11827.8 ORF39427 - 0.15 12.3 8.3 0.22 11.7 8.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3347) TnpW PF14202.6 ORF39427 - 0.15 11.9 1.0 0.28 11.0 0.1 1.9 2 0 0 2 2 2 0 Transposon-encoded protein TnpW VPS13_C PF16909.5 ORF39427 - 0.18 11.6 1.0 0.23 11.2 1.0 1.2 1 0 0 1 1 1 0 Vacuolar-sorting-associated 13 protein C-terminal BBS1 PF14779.6 ORF39427 - 0.18 11.2 5.4 0.24 10.8 5.4 1.2 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 1 Zw10 PF06248.13 ORF39427 - 0.18 10.3 9.0 0.2 10.2 9.0 1.0 1 0 0 1 1 1 0 Centromere/kinetochore Zw10 Exonuc_VII_L PF02601.15 ORF39427 - 0.22 11.0 10.0 0.29 10.7 10.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF5446 PF17522.2 ORF39427 - 0.31 11.2 13.8 0.69 10.1 1.7 3.1 1 1 1 2 2 2 0 Family of unknown function (DUF5446) DUF883 PF05957.13 ORF39427 - 0.34 11.5 9.5 0.22 12.1 5.1 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) HMW1C_N PF18071.1 ORF39427 - 0.41 10.4 6.5 0.64 9.8 1.0 2.2 1 1 1 2 2 2 0 HMW1C N-terminal Occludin_ELL PF07303.13 ORF39427 - 0.45 11.3 11.9 0.84 10.4 8.8 2.1 1 1 1 2 2 2 0 Occludin homology domain Phage_GPO PF05929.11 ORF39427 - 0.58 9.7 10.0 0.71 9.4 10.0 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Prominin PF05478.11 ORF39427 - 0.59 8.0 6.6 0.71 7.8 6.6 1.1 1 0 0 1 1 1 0 Prominin OmpH PF03938.14 ORF39427 - 0.66 10.3 21.2 0.1 12.9 14.8 2.1 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) GLE1 PF07817.13 ORF39427 - 0.76 8.9 8.1 0.91 8.7 7.5 1.4 1 1 0 1 1 1 0 GLE1-like protein ApoO PF09769.9 ORF39427 - 0.81 9.7 2.8 1.1 9.2 1.9 1.7 1 1 1 2 2 2 0 Apolipoprotein O YtxH PF12732.7 ORF39427 - 1.1 9.8 9.2 4.2 8.0 9.1 2.1 1 1 0 1 1 1 0 YtxH-like protein FUSC-like PF12805.7 ORF39427 - 1.3 8.0 4.6 1.9 7.5 4.6 1.2 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Allexi_40kDa PF05549.11 ORF39427 - 1.4 8.4 6.3 1.7 8.1 6.3 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein V_ATPase_I PF01496.19 ORF39427 - 1.5 6.7 11.7 1.6 6.5 11.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family YojJ PF10372.9 ORF39427 - 2.1 8.5 8.5 1.6 8.9 5.9 2.1 1 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus LMBR1 PF04791.16 ORF39427 - 2.2 7.1 11.8 2.6 6.9 11.8 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4407 PF14362.6 ORF39427 - 3.5 6.9 11.0 4.6 6.5 11.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Fib_alpha PF08702.10 ORF39427 - 3.7 7.7 14.9 2.6 8.2 11.0 2.2 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family DUF4446 PF14584.6 ORF39427 - 4.1 7.4 11.3 1.8 8.6 2.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF2203 PF09969.9 ORF39427 - 6.1 7.6 9.8 13 6.5 9.8 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DNA_primase_lrg PF04104.14 ORF39427 - 7.5 5.9 9.4 3 7.2 6.0 1.8 1 1 1 2 2 2 0 Eukaryotic and archaeal DNA primase, large subunit Gate PF07670.14 ORF38488 - 4.5e-09 36.6 2.2 7.3e-09 35.9 2.2 1.4 1 0 0 1 1 1 1 Nucleoside recognition Glyco_transf_5 PF08323.11 ORF38488 - 0.13 11.9 0.1 0.17 11.6 0.1 1.1 1 0 0 1 1 1 0 Starch synthase catalytic domain KASH_CCD PF14662.6 ORF38473 - 0.1 12.4 21.7 1.1 9.0 2.2 2.6 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH Spike_torovirin PF17072.5 ORF38473 - 0.17 9.0 0.5 0.17 9.0 0.5 1.0 1 0 0 1 1 1 0 Torovirinae spike glycoprotein HAUS6_N PF14661.6 ORF38473 - 0.23 11.0 6.7 0.31 10.6 6.7 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Pox_A_type_inc PF04508.12 ORF38473 - 0.71 9.8 5.5 4.7 7.2 0.0 3.8 4 0 0 4 4 4 0 Viral A-type inclusion protein repeat BST2 PF16716.5 ORF38473 - 1.7 9.3 13.0 1.3 9.6 5.5 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 TolA_bind_tri PF16331.5 ORF38473 - 1.8 8.7 10.5 0.97 9.6 7.2 2.3 2 1 0 2 2 2 0 TolA binding protein trimerisation Ubiquitin_3 PF14836.6 ORF38473 - 9.2 6.3 8.6 1.2 9.1 1.7 2.3 1 1 0 2 2 2 0 Ubiquitin-like domain RabGAP-TBC PF00566.18 ORF38435 - 6.4e-10 39.0 0.7 1.1e-09 38.2 0.0 1.7 2 0 0 2 2 2 1 Rab-GTPase-TBC domain DUF4028 PF13220.6 ORF38435 - 0.048 13.4 0.2 1.3 8.9 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4028) DUF3865 PF12981.7 ORF38435 - 0.049 13.5 0.0 11 5.8 0.0 2.2 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3865) PRESAN PF09687.10 ORF38435 - 0.38 11.3 5.8 1.1 9.8 5.2 2.1 1 1 0 1 1 1 0 Plasmodium RESA N-terminal UQ_con PF00179.26 ORF37985 - 9.4e-55 184.1 0.0 1.1e-54 183.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF37985 - 0.0027 17.4 0.0 0.0033 17.1 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF37985 - 0.0067 16.7 0.0 0.0084 16.4 0.0 1.3 1 0 0 1 1 1 1 RWD domain UEV PF05743.13 ORF37985 - 0.063 13.1 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 UEV domain Tropomyosin_1 PF12718.7 ORF37514 - 0.0015 18.7 12.7 0.0015 18.7 12.7 2.1 2 0 0 2 2 2 1 Tropomyosin like FAM76 PF16046.5 ORF37514 - 0.0024 17.3 19.4 0.0027 17.1 19.4 1.1 1 0 0 1 1 1 1 FAM76 protein DUF948 PF06103.11 ORF37514 - 0.019 15.2 2.9 0.02 15.2 1.5 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Guanylate_cyc_2 PF09778.9 ORF37514 - 0.032 13.6 1.3 0.043 13.2 1.3 1.2 1 0 0 1 1 1 0 Guanylylate cyclase DUF745 PF05335.13 ORF37514 - 0.13 12.0 5.9 0.18 11.5 5.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF745) ATG16 PF08614.11 ORF37514 - 0.13 12.5 13.8 0.2 11.8 13.7 1.3 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Exonuc_VII_L PF02601.15 ORF37514 - 0.24 10.9 9.9 0.3 10.6 9.9 1.2 1 1 0 1 1 1 0 Exonuclease VII, large subunit Laminin_II PF06009.12 ORF37514 - 0.57 10.2 12.9 1 9.3 9.3 2.1 1 1 1 2 2 2 0 Laminin Domain II UPF0242 PF06785.11 ORF37514 - 1.3 9.1 24.5 0.41 10.7 17.6 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus NAD_binding_6 PF08030.12 ORF37514 - 1.7 8.8 5.4 2.5 8.2 5.4 1.5 1 1 0 1 1 1 0 Ferric reductase NAD binding domain DUF4094 PF13334.6 ORF37514 - 1.7 9.1 12.4 0.058 13.8 5.2 2.2 1 1 2 3 3 3 0 Domain of unknown function (DUF4094) MPS2 PF17060.5 ORF37514 - 2.5 7.3 16.8 0.67 9.2 4.7 1.9 1 1 1 2 2 2 0 Monopolar spindle protein 2 TMF_DNA_bd PF12329.8 ORF37514 - 2.8 8.0 28.5 0.081 12.9 7.6 3.5 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding CENP-Q PF13094.6 ORF37514 - 3.1 8.0 16.0 0.25 11.5 10.3 1.8 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit APG6_N PF17675.1 ORF37514 - 4.3 7.9 18.9 6.6 7.3 18.5 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF4407 PF14362.6 ORF37514 - 4.5 6.6 8.1 6.4 6.0 8.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) HalX PF08663.10 ORF37514 - 6.7 7.1 8.7 2.4 8.6 0.3 3.0 2 1 1 3 3 3 0 HalX domain ADIP PF11559.8 ORF32609 - 0.0097 16.0 4.7 0.016 15.3 0.4 2.1 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding Filament PF00038.21 ORF32609 - 0.014 15.0 6.0 0.045 13.3 6.0 1.9 1 1 0 1 1 1 0 Intermediate filament protein bZIP_1 PF00170.21 ORF32609 - 0.022 14.9 3.8 0.67 10.1 0.3 3.1 2 1 3 5 5 5 0 bZIP transcription factor HALZ PF02183.18 ORF32609 - 0.034 14.4 0.2 0.18 12.0 0.0 2.3 2 1 1 3 3 2 0 Homeobox associated leucine zipper SPATA24 PF15175.6 ORF32609 - 0.036 14.0 2.8 0.045 13.6 2.8 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 24 DivIC PF04977.15 ORF32609 - 0.06 13.1 6.7 0.81 9.5 0.1 3.0 1 1 2 3 3 3 0 Septum formation initiator IFP_35_N PF07334.13 ORF32609 - 0.085 12.9 0.1 1.2 9.2 0.0 2.3 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Syntaxin-6_N PF09177.11 ORF32609 - 0.085 13.4 0.4 0.085 13.4 0.4 2.2 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Rootletin PF15035.6 ORF32609 - 0.11 12.6 6.1 0.85 9.6 6.1 2.1 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Lyase_1 PF00206.20 ORF32609 - 0.12 11.7 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Lyase YabA PF06156.13 ORF32609 - 0.17 12.6 2.5 1.4 9.6 2.5 2.0 1 1 0 1 1 1 0 Initiation control protein YabA DUF812 PF05667.11 ORF32609 - 0.19 10.6 5.5 0.028 13.3 1.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Cep57_MT_bd PF06657.13 ORF32609 - 0.2 12.2 3.8 4.7 7.7 0.1 2.7 2 2 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 FlaC_arch PF05377.11 ORF32609 - 0.2 12.1 2.5 15 6.1 0.0 3.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) CENP-F_leu_zip PF10473.9 ORF32609 - 0.25 11.4 5.6 20 5.2 1.4 2.0 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fez1 PF06818.15 ORF32609 - 0.31 11.5 3.1 2.8 8.3 3.7 1.8 1 1 0 1 1 1 0 Fez1 APG6_N PF17675.1 ORF32609 - 0.38 11.3 8.4 7.9 7.0 8.4 2.1 1 1 0 1 1 1 0 Apg6 coiled-coil region Paralemmin PF03285.15 ORF32609 - 0.53 9.8 4.0 7.8 6.0 0.1 2.0 1 1 1 2 2 2 0 Paralemmin ATG16 PF08614.11 ORF32609 - 0.55 10.4 10.1 0.035 14.3 5.0 1.6 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Ead_Ea22 PF13935.6 ORF32609 - 0.55 10.9 4.6 1.2 9.8 4.6 1.7 1 1 0 1 1 1 0 Ead/Ea22-like protein Spc24 PF08286.11 ORF32609 - 0.58 10.4 3.9 16 5.8 3.9 2.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF1640 PF07798.11 ORF32609 - 0.65 10.0 6.0 0.98 9.4 6.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) CENP-H PF05837.12 ORF32609 - 0.67 10.4 6.0 0.78 10.2 1.7 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Macoilin PF09726.9 ORF32609 - 0.74 8.3 6.0 1.4 7.4 6.0 1.4 1 1 0 1 1 1 0 Macoilin family TMF_DNA_bd PF12329.8 ORF32609 - 0.9 9.6 6.1 1.8 8.6 0.2 2.6 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding SlyX PF04102.12 ORF32609 - 1 10.0 8.0 17 6.1 1.7 3.2 1 1 1 2 2 2 0 SlyX DUF4407 PF14362.6 ORF32609 - 1.1 8.6 5.0 1.8 7.9 5.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Cep57_CLD_2 PF14197.6 ORF32609 - 2.8 8.1 11.5 0.6 10.2 0.7 3.3 2 1 2 4 4 4 0 Centrosome localisation domain of PPC89 CENP-Q PF13094.6 ORF32609 - 6.4 7.0 9.4 2.3e+02 1.9 9.3 2.6 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Nitr_red_alph_N PF14710.6 ORF30396 - 0.037 14.5 0.0 0.072 13.6 0.0 1.5 1 0 0 1 1 1 0 Respiratory nitrate reductase alpha N-terminal DUF3040 PF11239.8 ORF30295 - 0.31 11.3 1.2 20 5.5 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) PqiA PF04403.13 ORF30263 - 3.1e-51 173.3 10.9 3.4e-51 173.1 10.9 1.0 1 0 0 1 1 1 1 Paraquat-inducible protein A DUF3145 PF11343.8 ORF2938 - 0.048 13.2 0.1 0.064 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3145) Presenilin PF01080.17 ORF26863 - 6.9 5.3 5.1 7.8 5.1 5.1 1.1 1 0 0 1 1 1 0 Presenilin ABC_membrane PF00664.23 ORF26400 - 0.00067 19.4 3.7 0.00087 19.0 3.7 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region RAMP4 PF06624.12 ORF26400 - 0.034 14.2 3.5 2.1 8.5 0.2 2.5 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 DHHC PF01529.20 ORF26400 - 0.1 12.7 3.6 0.14 12.3 3.6 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase ATG27 PF09451.10 ORF26400 - 0.9 9.3 3.2 0.44 10.4 1.1 1.5 1 1 0 2 2 2 0 Autophagy-related protein 27 Bac_rhodopsin PF01036.18 ORF258 - 3.5e-19 69.3 4.3 4e-19 69.1 4.3 1.0 1 0 0 1 1 1 1 Bacteriorhodopsin-like protein Phage_holin_3_7 PF05449.11 ORF258 - 0.13 12.3 1.0 0.42 10.7 0.1 2.0 2 0 0 2 2 2 0 Putative 3TM holin, Phage_holin_3 Biliv-reduc_cat PF09166.10 ORF22706 - 0.025 14.9 0.9 0.28 11.5 0.3 2.1 2 0 0 2 2 2 0 Biliverdin reductase, catalytic UQ_con PF00179.26 ORF21189 - 9.4e-55 184.1 0.0 1.1e-54 183.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF21189 - 0.0027 17.4 0.0 0.0033 17.1 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF21189 - 0.0067 16.7 0.0 0.0084 16.4 0.0 1.3 1 0 0 1 1 1 1 RWD domain UEV PF05743.13 ORF21189 - 0.063 13.1 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 UEV domain CxxCxxCC PF03692.15 ORF17097 - 1.7e-08 35.0 10.3 3.1e-08 34.2 10.3 1.5 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain His_Phos_2 PF00328.22 ORF17088 - 1.1e-11 44.7 1.9 2e-09 37.3 0.0 2.0 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) His_Phos_1 PF00300.22 ORF17088 - 0.16 11.7 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 1) ubiquitin PF00240.23 ORF15478 - 5.9e-67 221.4 7.8 4.4e-33 112.8 0.9 2.0 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF15478 - 1.8e-31 107.8 9.3 2e-15 56.4 1.4 2.0 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF15478 - 3.7e-12 46.5 2.4 0.00015 22.2 0.2 3.3 2 2 0 2 2 2 2 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF15478 - 2.4e-08 33.8 0.7 0.0066 16.4 0.1 2.2 2 0 0 2 2 2 2 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF15478 - 1.5e-07 31.5 0.5 0.028 14.5 0.1 2.8 2 2 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF15478 - 1.9e-07 31.3 1.3 0.018 15.4 0.1 2.1 2 0 0 2 2 2 2 Ubiquitin-like domain DUF2407 PF10302.9 ORF15478 - 7.2e-07 29.7 0.2 0.053 14.1 0.0 2.1 1 1 1 2 2 2 2 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF15478 - 8.7e-06 25.7 9.2 2.2 8.4 0.2 4.0 4 0 0 4 4 4 4 Ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF15478 - 0.00049 20.0 0.0 0.87 9.4 0.0 2.1 1 1 1 2 2 2 2 Silencing defective 2 N-terminal ubiquitin domain DUF2870 PF11069.8 ORF15478 - 0.013 15.8 0.1 11 6.5 0.0 2.8 2 2 1 3 3 3 0 Protein of unknown function (DUF2870) DUF3861 PF12977.7 ORF15478 - 0.051 13.7 0.5 10 6.4 0.1 2.2 1 1 1 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3861) TmoB PF06234.12 ORF15478 - 0.069 13.3 1.5 14 5.9 0.1 2.7 2 2 0 2 2 2 0 Toluene-4-monooxygenase system protein B (TmoB) UDP-g_GGTase PF06427.11 ORF15478 - 0.12 12.5 0.8 1.3 9.2 0.1 2.4 3 0 0 3 3 3 0 UDP-glucose:Glycoprotein Glucosyltransferase DUF969 PF06149.12 ORF15478 - 0.15 11.4 0.0 5.6 6.3 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF969) FlgD_ig PF13860.6 ORF15478 - 0.22 11.4 1.6 21 5.0 0.1 2.4 2 0 0 2 2 2 0 FlgD Ig-like domain FERM_f0 PF16511.5 ORF15478 - 0.34 11.2 2.1 42 4.5 0.2 3.3 2 2 0 2 2 2 0 N-terminal or F0 domain of Talin-head FERM Ank_2 PF12796.7 ORF14678 - 8.9e-11 42.2 0.0 1.6e-10 41.4 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF14678 - 2e-10 40.7 0.3 5e-07 29.9 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF14678 - 3.9e-08 33.4 0.2 0.00019 21.7 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF14678 - 9.5e-08 31.7 0.0 0.027 15.0 0.0 2.9 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF14678 - 5.3e-07 30.1 0.0 0.00025 21.6 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) DUF3040 PF11239.8 ORF12125 - 0.31 11.3 1.2 20 5.5 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) Orn_Arg_deC_N PF02784.16 ORF112406 - 0.075 12.4 0.4 0.084 12.2 0.4 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FAM183 PF14886.6 ORF112406 - 0.36 11.6 7.5 1.4 9.6 7.5 2.0 1 1 0 1 1 1 0 FAM183A and FAM183B related Sod_Ni PF09055.11 ORF11218 - 7.2e-28 97.7 0.8 8.6e-28 97.4 0.8 1.0 1 0 0 1 1 1 1 Nickel-containing superoxide dismutase AKAP7_NLS PF10469.9 ORF11218 - 0.057 13.3 0.5 0.072 13.0 0.5 1.1 1 0 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain UQ_con PF00179.26 ORF110330 - 1.2e-53 180.5 0.0 1.4e-53 180.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF110330 - 6.5e-05 22.6 0.0 8.7e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF110330 - 0.00062 20.0 0.1 0.00083 19.6 0.1 1.3 1 0 0 1 1 1 1 RWD domain Glyco_hydro_4C PF11975.8 ORF110151 - 5.3e-34 118.1 0.1 6e-34 117.9 0.1 1.0 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain COX1 PF00115.20 ORF108840 - 7.6e-19 67.9 16.3 9.7e-19 67.5 16.3 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF2631 PF10939.8 ORF108840 - 0.01 15.7 0.5 0.079 12.8 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2631) Phage_lysis PF03245.13 ORF106003 - 1.2e-49 167.6 13.1 1.4e-49 167.4 13.1 1.0 1 0 0 1 1 1 1 Bacteriophage Rz lysis protein DUF2681 PF10883.8 ORF106003 - 0.00026 21.3 1.1 0.00026 21.3 1.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2681) PspB PF06667.12 ORF106003 - 0.0098 15.9 0.7 0.022 14.8 0.1 1.9 2 1 0 2 2 2 1 Phage shock protein B ZapB PF06005.12 ORF106003 - 0.087 13.3 0.2 0.087 13.3 0.2 1.8 2 1 0 2 2 2 0 Cell division protein ZapB Oleosin PF01277.17 ORF106003 - 0.087 12.6 0.4 0.21 11.4 0.1 1.8 2 0 0 2 2 2 0 Oleosin DUF3810 PF12725.7 ORF106003 - 0.18 11.1 0.4 0.24 10.7 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) ATP-synt_B PF00430.18 ORF106003 - 0.36 10.9 8.4 0.46 10.6 7.8 1.7 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) DUF1977 PF09320.11 ORF104548 - 1.1e-13 51.3 5.2 1.1e-13 51.3 5.2 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF1977) Maf1 PF09174.10 ORF104548 - 0.0012 19.1 0.9 0.0015 18.8 0.9 1.2 1 0 0 1 1 1 1 Maf1 regulator EF-hand_1 PF00036.32 ORF104473 - 1.8e-15 55.2 5.6 1.8e-05 24.0 0.1 3.6 4 0 0 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF104473 - 1.4e-14 54.3 2.8 5.1e-07 30.1 0.1 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF104473 - 1.3e-12 46.6 2.9 0.00017 21.3 0.1 3.4 2 1 1 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 ORF104473 - 1.7e-11 43.1 4.1 0.00013 21.3 0.1 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF104473 - 1.8e-09 37.3 3.0 0.00076 19.3 0.1 3.0 1 1 2 3 3 3 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF104473 - 0.00054 20.3 0.0 1.2 9.5 0.0 2.2 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region DUF3231 PF11553.8 ORF104473 - 0.014 15.0 0.2 0.047 13.3 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3231) EF-hand_4 PF12763.7 ORF104473 - 0.015 15.2 0.7 0.4 10.7 0.1 2.4 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand DUF1500 PF07389.12 ORF104339 - 0.047 13.8 0.5 0.084 13.0 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1500) ATP12 PF07542.11 ORF103412 - 0.00017 21.7 0.2 0.00034 20.7 0.2 1.5 1 0 0 1 1 1 1 ATP12 chaperone protein Acetyltransf_6 PF13480.7 ORF103412 - 0.033 14.3 0.2 0.048 13.8 0.2 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain TFIIA PF03153.13 ORF101110 - 7.3 6.5 5.3 7.8 6.4 5.3 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Acyl-CoA_dh_1 PF00441.24 ORF100780 - 4.2e-35 121.2 1.9 4.6e-35 121.0 1.9 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF100780 - 2.7e-12 47.1 2.9 3.2e-12 46.9 2.9 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Connexin PF00029.19 NODE_43965_length_454_cov_1.761337_g36256_i0forward_frame_1 - 0.063 13.0 0.7 0.075 12.8 0.1 1.4 2 0 0 2 2 2 0 Connexin Gemini_AL1 PF00799.20 NODE_43954_length_454_cov_2.928401_g36245_i0forward_frame_1 - 0.027 14.9 1.9 0.18 12.2 0.2 2.2 2 0 0 2 2 2 0 Geminivirus Rep catalytic domain RabGAP-TBC PF00566.18 NODE_43953_length_454_cov_2.935561_g36244_i0reverse_frame_1 - 1.6e-16 60.6 1.5 2.2e-16 60.2 1.5 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF445 PF04286.12 NODE_43952_length_454_cov_2.973747_g36243_i0forward_frame_1 - 0.1 12.4 2.5 0.12 12.2 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF445) DUF3284 PF11687.8 NODE_43952_length_454_cov_2.973747_g36243_i0forward_frame_1 - 0.19 11.6 6.2 0.24 11.3 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3284) Mx_ML PF17536.2 NODE_43948_length_454_cov_3.758950_g36239_i0reverse_frame_1 - 0.034 13.9 0.1 0.059 13.1 0.1 1.3 1 0 0 1 1 1 0 Matrix and Matrix long proteins N-terminal PikAIV_N PF18605.1 NODE_43944_length_454_cov_39.250597_g36235_i0forward_frame_1 - 6.7 6.4 6.1 11 5.7 6.1 1.4 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain DUF4711 PF15829.5 NODE_43943_length_454_cov_41.023866_g36234_i0forward_frame_1 - 0.027 14.4 0.0 0.032 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4711) Helicase_C PF00271.31 NODE_43942_length_454_cov_46.035800_g36233_i0reverse_frame_1 - 0.76 10.1 0.1 0.76 10.1 0.1 2.2 2 0 0 2 2 2 0 Helicase conserved C-terminal domain MmgE_PrpD PF03972.14 NODE_43930_length_454_cov_102.000000_g36221_i0forward_frame_1 - 0.00021 20.0 0.1 0.00034 19.3 0.1 1.2 1 0 0 1 1 1 1 MmgE/PrpD family zf-C3HC4_3 PF13920.6 NODE_43918_length_454_cov_161.627685_g36209_i0reverse_frame_1 - 0.00019 21.2 7.7 0.00048 19.9 7.7 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) CEBP_ZZ PF16366.5 NODE_43918_length_454_cov_161.627685_g36209_i0reverse_frame_1 - 0.05 13.8 3.3 0.05 13.8 3.3 2.2 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain SelR PF01641.18 NODE_43910_length_454_cov_445.291169_g34278_i1reverse_frame_1 - 1.1e-13 51.3 0.2 1.6e-13 50.8 0.2 1.2 1 0 0 1 1 1 1 SelR domain DUF3772 PF12607.8 NODE_43909_length_454_cov_496.930788_g36201_i0forward_frame_1 - 0.075 12.8 0.6 0.43 10.4 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3772) Rick_17kDa_Anti PF05433.15 NODE_43895_length_455_cov_2.209524_g36188_i0reverse_frame_1 - 1.3e-11 44.1 15.9 1.9e-11 43.6 15.9 1.2 1 0 0 1 1 1 1 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 NODE_43895_length_455_cov_2.209524_g36188_i0reverse_frame_1 - 2.5e-05 24.2 13.1 4.3e-05 23.4 13.1 1.3 1 0 0 1 1 1 1 Glycine zipper Gly-zipper_YMGG PF13441.6 NODE_43895_length_455_cov_2.209524_g36188_i0reverse_frame_1 - 4.2e-05 23.2 14.4 5.8e-05 22.7 14.4 1.2 1 0 0 1 1 1 1 YMGG-like Gly-zipper TraT PF05818.12 NODE_43895_length_455_cov_2.209524_g36188_i0reverse_frame_1 - 0.0045 16.7 1.1 0.0053 16.5 1.1 1.1 1 0 0 1 1 1 1 Enterobacterial TraT complement resistance protein Bacteriocin_IIc PF10439.9 NODE_43895_length_455_cov_2.209524_g36188_i0reverse_frame_1 - 0.22 11.7 7.5 0.35 11.0 7.5 1.3 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Actin PF00022.19 NODE_43890_length_455_cov_2.733333_g36183_i0reverse_frame_1 - 4.2e-06 25.6 0.1 4.3e-06 25.6 0.1 1.1 1 0 0 1 1 1 1 Actin Scaffolding_pro PF11418.8 NODE_43890_length_455_cov_2.733333_g36183_i0reverse_frame_1 - 0.75 10.4 3.9 0.91 10.1 3.0 1.6 1 1 1 2 2 2 0 Phi29 scaffolding protein zf-CCHC PF00098.23 NODE_43888_length_455_cov_3.064286_g36181_i0reverse_frame_1 - 0.0045 17.0 0.2 0.0067 16.5 0.2 1.3 1 0 0 1 1 1 1 Zinc knuckle Herpes_LMP1 PF05297.11 NODE_43888_length_455_cov_3.064286_g36181_i0reverse_frame_1 - 8.1 5.5 8.7 11 5.1 8.7 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) BCMA-Tall_bind PF09257.10 NODE_43887_length_455_cov_3.354762_g36180_i0reverse_frame_1 - 0.021 14.9 0.6 0.038 14.1 0.6 1.4 1 0 0 1 1 1 0 BCMA, TALL-1 binding Transp_cyt_pur PF02133.15 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 3e-37 128.5 11.4 3.3e-37 128.3 11.4 1.0 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin PKD_channel PF08016.12 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.0083 14.9 0.9 0.011 14.4 0.9 1.2 1 0 0 1 1 1 1 Polycystin cation channel SLATT_5 PF18160.1 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.071 12.4 0.4 0.2 11.0 0.0 1.8 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 PDR_CDR PF06422.12 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.27 11.1 3.5 0.93 9.4 0.1 2.3 1 1 1 2 2 2 0 CDR ABC transporter WTF PF03303.13 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.5 10.1 3.1 0.89 9.2 2.4 1.6 1 1 1 2 2 2 0 WTF protein DUF2768 PF10966.8 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.65 10.5 0.1 0.65 10.5 0.1 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF2768) DUF1206 PF06724.11 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 1 9.5 11.4 0.2 11.8 5.9 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1206) DUF2157 PF09925.9 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 1.2 8.9 8.3 0.17 11.6 3.5 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) DUF456 PF04306.13 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 2.6 8.3 14.5 4.2 7.7 14.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF456) DALR_1 PF05746.15 NODE_43874_length_455_cov_64.645238_g36167_i0forward_frame_1 - 0.035 14.3 1.5 0.059 13.5 1.5 1.4 1 0 0 1 1 1 0 DALR anticodon binding domain BKACE PF05853.12 NODE_43852_length_455_cov_266.264286_g36145_i0forward_frame_1 - 0.061 12.6 0.3 0.088 12.1 0.3 1.2 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme YjcZ PF13990.6 NODE_43843_length_456_cov_1.700713_g36138_i0forward_frame_1 - 0.04 13.3 0.6 0.054 12.9 0.4 1.4 1 1 0 1 1 1 0 YjcZ-like protein 2-ph_phosp PF04029.14 NODE_43843_length_456_cov_1.700713_g36138_i0forward_frame_1 - 0.047 12.9 0.0 0.08 12.1 0.0 1.4 1 0 0 1 1 1 0 2-phosphosulpholactate phosphatase DeoRC PF00455.22 NODE_43840_length_456_cov_2.073634_g36135_i0forward_frame_1 - 5.9e-37 127.1 1.5 6.7e-37 126.9 1.5 1.0 1 0 0 1 1 1 1 DeoR C terminal sensor domain Lamprin PF06403.11 NODE_43837_length_456_cov_2.615202_g36132_i0forward_frame_1 - 2.3 8.2 5.8 2.9 7.9 5.8 1.1 1 0 0 1 1 1 0 Lamprin AMP-binding PF00501.28 NODE_43835_length_456_cov_2.669834_g36130_i0forward_frame_1 - 2.6e-17 62.5 0.0 2.9e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme DUF3147 PF11345.8 NODE_43835_length_456_cov_2.669834_g36130_i0forward_frame_1 - 0.011 16.1 0.5 0.018 15.4 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3147) SLATT_1 PF18181.1 NODE_43834_length_456_cov_3.026128_g36129_i0forward_frame_1 - 0.098 12.6 0.7 0.17 11.8 0.0 1.6 2 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 PAP2 PF01569.21 NODE_43819_length_456_cov_73.973872_g36114_i0reverse_frame_1 - 4.9e-08 32.8 1.2 7.5e-08 32.2 1.2 1.3 1 0 0 1 1 1 1 PAP2 superfamily DUF212 PF02681.14 NODE_43819_length_456_cov_73.973872_g36114_i0reverse_frame_1 - 0.19 11.9 3.1 6.2 7.0 0.2 2.2 1 1 1 2 2 2 0 Divergent PAP2 family YrvL PF14184.6 NODE_43819_length_456_cov_73.973872_g36114_i0reverse_frame_1 - 0.2 11.7 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Regulatory protein YrvL Antimicrobial23 PF16048.5 NODE_43817_length_456_cov_74.878860_g36112_i0reverse_frame_1 - 0.066 12.9 0.8 0.13 12.0 0.8 1.5 1 0 0 1 1 1 0 Frog antimicrobial peptide zf-RING_2 PF13639.6 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 3.1e-09 37.0 2.2 3.1e-09 37.0 2.2 1.7 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 2.3e-06 27.8 2.7 2.3e-06 27.8 2.7 2.3 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 4.7e-06 26.2 2.1 9.5e-06 25.3 2.1 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 2.1e-05 24.3 1.6 5e-05 23.0 1.6 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 2.4e-05 24.3 2.3 5.4e-05 23.1 2.3 1.6 1 0 0 1 1 1 1 RING-type zinc-finger FANCL_C PF11793.8 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 0.0018 18.4 1.1 0.0036 17.5 1.1 1.6 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_5 PF14634.6 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 0.0021 18.0 1.4 0.0021 18.0 1.4 1.6 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 0.0072 16.2 1.6 0.017 15.0 1.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 0.019 15.1 1.8 0.019 15.1 1.8 2.0 2 0 0 2 2 2 0 RING-variant domain zf-ANAPC11 PF12861.7 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 0.02 15.0 1.7 0.02 15.0 1.7 2.2 2 2 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Glycoprotein_G PF00802.19 NODE_43806_length_456_cov_95.437055_g36101_i0reverse_frame_1 - 0.17 11.2 5.0 1.2 8.5 5.0 2.0 1 1 0 1 1 1 0 Pneumovirus attachment glycoprotein G RCC1_2 PF13540.6 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 1.3e-06 28.0 4.8 0.37 10.7 0.1 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 0.0012 17.6 0.5 0.23 10.0 0.1 2.7 2 1 1 3 3 3 2 Putative S-adenosyl-L-methionine-dependent methyltransferase DUF155 PF02582.14 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 0.0019 18.4 0.5 11 6.1 0.0 3.1 2 1 1 3 3 3 1 Uncharacterised ACR, YagE family COG1723 NPV_P10 PF05531.12 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 0.007 16.8 0.8 20 5.7 0.0 3.7 4 0 0 4 4 4 0 Nucleopolyhedrovirus P10 protein Spectrin PF00435.21 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 0.0097 16.4 0.5 17 5.9 0.0 3.5 4 0 0 4 4 4 1 Spectrin repeat UPF0180 PF03698.13 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 0.012 15.8 1.1 65 3.8 0.0 4.0 4 0 0 4 4 4 0 Uncharacterised protein family (UPF0180) Yuri_gagarin PF15934.5 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 0.043 13.7 0.0 0.6 9.9 0.0 2.1 1 1 2 3 3 3 0 Yuri gagarin GST_C_2 PF13410.6 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 0.16 12.0 0.1 23 5.1 0.1 3.0 2 1 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Phage_holin_7_1 PF16081.5 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 0.85 9.8 12.9 9.5 6.4 8.5 3.3 1 1 1 2 2 2 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family PheRS_DBD2 PF18554.1 NODE_43799_length_456_cov_124.304038_g36094_i0reverse_frame_1 - 1.5 8.9 18.6 2.8 8.0 0.7 4.2 4 0 0 4 4 4 0 PheRS DNA binding domain 2 Metallothio_Pro PF02069.16 NODE_43798_length_456_cov_134.510689_g33645_i1forward_frame_1 - 0.16 12.2 2.0 0.41 10.9 0.6 2.0 2 0 0 2 2 2 0 Prokaryotic metallothionein RCSD PF05177.12 NODE_43795_length_456_cov_164.985748_g36091_i0forward_frame_1 - 0.011 16.7 0.3 0.011 16.7 0.3 1.6 2 0 0 2 2 2 0 RCSD region TPR_MLP1_2 PF07926.12 NODE_43790_length_456_cov_210.292162_g36086_i0reverse_frame_1 - 0.0065 16.5 2.8 0.015 15.3 0.2 2.3 1 1 1 2 2 2 1 TPR/MLP1/MLP2-like protein Caprin-1_dimer PF18293.1 NODE_43787_length_456_cov_249.686461_g36083_i0reverse_frame_1 - 0.00047 20.6 0.1 0.00065 20.2 0.1 1.1 1 0 0 1 1 1 1 Caprin-1 dimerization domain MetallophosC PF16370.5 NODE_43766_length_457_cov_2.154028_g36064_i0forward_frame_3 - 0.087 13.1 0.3 0.095 12.9 0.3 1.2 1 0 0 1 1 1 0 C terminal of Calcineurin-like phosphoesterase DUF4674 PF15719.5 NODE_43764_length_457_cov_2.701422_g36062_i0forward_frame_3 - 1.7 8.6 8.4 0.79 9.7 5.4 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4674) LAP1C PF05609.12 NODE_43764_length_457_cov_2.701422_g36062_i0forward_frame_2 - 0.34 9.9 9.7 0.39 9.7 9.7 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) NAD_binding_3 PF03447.16 NODE_43762_length_457_cov_3.161137_g36060_i0reverse_frame_3 - 1.6e-28 99.7 0.0 1.8e-28 99.5 0.0 1.0 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain MSA-2c PF12238.8 NODE_43762_length_457_cov_3.161137_g36060_i0reverse_frame_3 - 0.1 12.6 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Pyr_redox_2 PF07992.14 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 2.3e-05 23.8 0.0 2.9e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 0.00023 21.7 0.0 0.0011 19.5 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 0.011 15.0 0.0 0.014 14.7 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 0.089 13.2 0.0 0.14 12.7 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding SVM_signal PF12113.8 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 0.2 11.6 0.1 0.33 10.9 0.1 1.3 1 0 0 1 1 1 0 SVM protein signal sequence Syd PF07348.12 NODE_43761_length_457_cov_3.196682_g36059_i0forward_frame_2 - 0.13 11.9 0.0 0.24 11.0 0.0 1.4 2 0 0 2 2 2 0 Syd protein (SUKH-2) S36_mt PF10937.8 NODE_43753_length_457_cov_56.419431_g36051_i0reverse_frame_2 - 0.0061 18.1 1.3 0.011 17.3 1.1 1.7 1 1 0 1 1 1 1 Ribosomal protein S36, mitochondrial UvdE PF03851.14 NODE_43752_length_457_cov_57.623223_g36050_i0forward_frame_2 - 0.11 11.7 0.2 0.18 11.0 0.2 1.2 1 0 0 1 1 1 0 UV-endonuclease UvdE DUF3275 PF11679.8 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 0.48 10.4 5.8 0.65 9.9 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) SAPS PF04499.15 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 1.3 7.7 13.8 1.5 7.5 13.8 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein GAGA_bind PF06217.12 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 1.6 8.9 16.8 1.8 8.8 16.8 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family FUSC PF04632.12 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 8.6 4.8 6.4 11 4.5 6.4 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF4410 PF14366.6 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 9.7 6.1 10.8 0.35 10.8 3.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4410) DUF5323 PF17257.2 NODE_43750_length_457_cov_62.286730_g36048_i0reverse_frame_3 - 0.026 14.4 1.2 1.2 9.1 0.2 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5323) zf-C3HC4_4 PF15227.6 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 1.5e-05 25.1 7.0 3.4e-05 23.9 7.0 1.7 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 0.0032 17.3 5.8 0.0045 16.8 1.5 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 0.012 15.4 4.1 0.033 14.1 4.0 1.8 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 0.018 15.0 2.3 0.018 15.0 2.3 2.3 2 0 0 2 2 2 0 RING-type zinc-finger ArfGap PF01412.18 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 0.039 14.0 5.0 1.5 8.9 5.0 2.1 1 1 0 1 1 1 0 Putative GTPase activating protein for Arf zf-RING_10 PF16685.5 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 0.041 14.0 5.6 0.073 13.2 5.6 1.4 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-RING_14 PF17978.1 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 0.051 14.0 2.3 0.13 12.7 2.3 1.8 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3HC4_3 PF13920.6 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 0.15 12.0 5.6 2.2 8.2 5.6 2.2 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) NOB1_Zn_bind PF08772.11 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 0.23 11.7 3.3 0.44 10.8 1.8 2.1 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-RING_5 PF14634.6 NODE_43748_length_457_cov_65.113744_g36046_i0reverse_frame_3 - 0.69 9.9 8.0 3.5 7.7 6.9 2.2 1 1 1 2 2 2 0 zinc-RING finger domain Integrase_Zn PF02022.19 NODE_43743_length_457_cov_81.954976_g36041_i0reverse_frame_3 - 0.069 13.1 0.1 0.18 11.8 0.1 1.7 1 0 0 1 1 1 0 Integrase Zinc binding domain SUI1 PF01253.22 NODE_43743_length_457_cov_81.954976_g36041_i0reverse_frame_3 - 0.13 12.8 0.1 0.3 11.6 0.1 1.6 1 0 0 1 1 1 0 Translation initiation factor SUI1 Ribosomal_S27 PF01599.19 NODE_43740_length_457_cov_88.085308_g36038_i0forward_frame_3 - 9.7e-24 83.3 2.3 9.7e-24 83.3 2.3 2.0 2 0 0 2 2 2 1 Ribosomal protein S27a ubiquitin PF00240.23 NODE_43740_length_457_cov_88.085308_g36038_i0forward_frame_3 - 8.6e-05 22.2 0.0 0.00027 20.6 0.0 1.8 2 0 0 2 2 2 1 Ubiquitin family SURNod19 PF07712.12 NODE_43721_length_457_cov_1231.215640_g36019_i0reverse_frame_2 - 0.033 12.9 0.1 0.038 12.8 0.1 1.1 1 0 0 1 1 1 0 Stress up-regulated Nod 19 Zfx_Zfy_act PF04704.13 NODE_43715_length_458_cov_1.425532_g36016_i0reverse_frame_3 - 0.12 11.5 0.1 0.13 11.4 0.1 1.1 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region Gp49 PF05973.14 NODE_43714_length_458_cov_1.912530_g36015_i0reverse_frame_2 - 0.067 13.3 0.2 0.11 12.6 0.2 1.4 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) Dynein_AAA_lid PF17852.1 NODE_43711_length_458_cov_2.359338_g36012_i0reverse_frame_3 - 0.16 12.1 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain DUF1002 PF06207.11 NODE_43710_length_458_cov_2.382979_g36011_i0reverse_frame_3 - 0.04 13.5 0.1 0.048 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) Phi-29_GP16_7 PF06720.11 NODE_43710_length_458_cov_2.382979_g36011_i0reverse_frame_3 - 0.051 13.4 0.1 0.06 13.2 0.1 1.2 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 STATa_Ig PF18214.1 NODE_43709_length_458_cov_2.475177_g36010_i0reverse_frame_2 - 0.016 15.2 0.7 0.03 14.3 0.1 1.7 1 1 1 2 2 2 0 STATa Immunoglobulin-like domain CEP44 PF15007.6 NODE_43709_length_458_cov_2.475177_g36010_i0forward_frame_2 - 0.14 12.3 1.6 0.73 10.0 0.5 2.5 1 1 1 2 2 2 0 Centrosomal spindle body, CEP44 DUF3346 PF11826.8 NODE_43703_length_458_cov_4.945626_g36004_i0reverse_frame_2 - 0.064 13.0 0.3 0.08 12.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) CesT PF05932.13 NODE_43702_length_458_cov_5.758865_g36003_i0reverse_frame_2 - 0.088 12.9 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Tir chaperone protein (CesT) family DnaJ PF00226.31 NODE_43695_length_458_cov_80.170213_g35996_i0reverse_frame_2 - 0.0048 17.0 0.1 0.011 15.9 0.0 1.6 2 0 0 2 2 2 1 DnaJ domain IMUP PF15761.5 NODE_43695_length_458_cov_80.170213_g35996_i0reverse_frame_2 - 0.025 15.3 0.5 0.038 14.7 0.5 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein Zn-ribbon_8 PF09723.10 NODE_43695_length_458_cov_80.170213_g35996_i0reverse_frame_2 - 0.98 9.6 8.9 2.3 8.4 8.9 1.7 1 0 0 1 1 1 0 Zinc ribbon domain Prok-RING_1 PF14446.6 NODE_43695_length_458_cov_80.170213_g35996_i0reverse_frame_2 - 2 8.4 13.8 1.5 8.8 8.7 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 ACP_syn_III_C PF08541.10 NODE_43695_length_458_cov_80.170213_g35996_i0forward_frame_3 - 0.18 12.0 0.0 1.6 9.0 0.0 2.0 1 1 1 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Ndc1_Nup PF09531.10 NODE_43695_length_458_cov_80.170213_g35996_i0forward_frame_2 - 0.021 13.6 0.1 0.032 12.9 0.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF2545 PF10810.8 NODE_43695_length_458_cov_80.170213_g35996_i0forward_frame_2 - 0.051 13.7 0.2 0.095 12.9 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2545) Glyco_hydro_92N PF17678.1 NODE_43694_length_458_cov_83.000000_g35995_i0reverse_frame_3 - 0.043 13.7 0.0 0.046 13.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 92 N-terminal domain Herpes_UL56 PF04534.12 NODE_43690_length_458_cov_89.874704_g35991_i0reverse_frame_2 - 0.13 11.7 0.2 0.21 11.1 0.2 1.2 1 0 0 1 1 1 0 Herpesvirus UL56 protein Sigma_reg_N PF13800.6 NODE_43685_length_458_cov_96.654846_g35986_i0forward_frame_2 - 0.047 14.0 6.5 0.13 12.5 6.5 1.7 1 0 0 1 1 1 0 Sigma factor regulator N-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks145.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks145.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks145.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks145.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RLI PF04068.15 NODE_43679_length_458_cov_104.730496_g35980_i0forward_frame_3 - 0.049 13.5 1.2 0.11 12.3 1.2 1.5 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI BILBO1_N PF18281.1 NODE_43678_length_458_cov_115.905437_g35979_i0reverse_frame_3 - 0.074 13.5 0.7 0.15 12.5 0.7 1.5 1 0 0 1 1 1 0 BILBO1 N-terminal domain NLE PF08154.12 NODE_43678_length_458_cov_115.905437_g35979_i0forward_frame_3 - 0.062 13.8 0.1 0.22 12.0 0.0 1.9 2 0 0 2 2 2 0 NLE (NUC135) domain HydF_dimer PF18128.1 NODE_43678_length_458_cov_115.905437_g35979_i0forward_frame_3 - 0.081 13.0 0.5 1.5 8.9 0.0 2.1 2 0 0 2 2 2 0 Hydrogen maturase F dimerization domain DUF3920 PF13058.6 NODE_43671_length_458_cov_190.546099_g35973_i0forward_frame_2 - 0.039 14.2 0.8 0.055 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3920) Tctex-1 PF03645.13 NODE_43660_length_458_cov_3758.219858_g34058_i5reverse_frame_3 - 1.1e-21 76.9 2.0 1.5e-21 76.6 2.0 1.2 1 0 0 1 1 1 1 Tctex-1 family ENT PF03735.14 NODE_43659_length_458_cov_7025.219858_g414_i2reverse_frame_3 - 0.039 14.0 1.7 0.046 13.8 0.3 1.9 2 1 0 2 2 2 0 ENT domain DUF2514 PF10721.9 NODE_43659_length_458_cov_7025.219858_g414_i2reverse_frame_3 - 1 9.4 12.0 1.2 9.1 12.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2514) DUF2830 PF11125.8 NODE_43659_length_458_cov_7025.219858_g414_i2forward_frame_3 - 6.2 6.9 9.1 2 8.5 2.2 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2830) GCP_C_terminal PF04130.13 NODE_43647_length_459_cov_2.641509_g35951_i0forward_frame_3 - 0.14 11.6 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal PPV_E2_N PF00508.17 NODE_43645_length_459_cov_2.870283_g35949_i0reverse_frame_3 - 0.057 12.8 0.2 0.1 11.9 0.1 1.3 1 1 0 1 1 1 0 E2 (early) protein, N terminal Cnd1_N PF12922.7 NODE_43644_length_459_cov_3.009434_g35948_i0forward_frame_3 - 0.028 14.3 0.6 0.045 13.6 0.6 1.3 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term ERF PF04404.12 NODE_43642_length_459_cov_3.316038_g35946_i0forward_frame_2 - 0.2 11.5 0.4 0.67 9.8 0.1 1.9 2 0 0 2 2 2 0 ERF superfamily LapA_dom PF06305.11 NODE_43639_length_459_cov_32.113208_g35943_i0reverse_frame_2 - 0.11 12.3 0.7 0.17 11.7 0.1 1.6 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain TMEMspv1-c74-12 PF11044.8 NODE_43625_length_459_cov_90.443396_g35931_i0reverse_frame_2 - 0.6 10.1 3.1 1.1 9.3 3.1 1.4 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein CRT-like PF08627.10 NODE_43619_length_459_cov_110.589623_g35925_i0reverse_frame_2 - 0.00019 20.5 0.2 0.00023 20.2 0.2 1.1 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like NT5C PF06941.12 NODE_43618_length_459_cov_113.540094_g35924_i0reverse_frame_3 - 0.077 12.9 0.1 0.34 10.7 0.1 1.8 1 1 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Adenine_deam_C PF13382.6 NODE_43616_length_459_cov_120.615566_g35922_i0reverse_frame_2 - 0.13 11.6 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 Adenine deaminase C-terminal domain N-glycanase_C PF09113.10 NODE_43599_length_459_cov_380.384434_g35907_i0forward_frame_3 - 0.016 15.0 0.2 0.025 14.4 0.2 1.3 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal Reo_P9 PF06043.11 NODE_43598_length_459_cov_564.750000_g35906_i0forward_frame_3 - 0.012 15.1 0.3 0.013 14.9 0.3 1.1 1 0 0 1 1 1 0 Reovirus P9-like family DUF2273 PF10031.9 NODE_43598_length_459_cov_564.750000_g35906_i0forward_frame_3 - 0.021 14.9 1.2 0.036 14.1 1.2 1.3 1 0 0 1 1 1 0 Small integral membrane protein (DUF2273) DUF3899 PF13038.6 NODE_43598_length_459_cov_564.750000_g35906_i0forward_frame_3 - 0.028 14.9 0.8 0.043 14.3 0.3 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3899) Peptidase_C1 PF00112.23 NODE_43592_length_459_cov_10943.733491_g10962_i1forward_frame_3 - 3.7e-24 86.0 0.9 4.7e-24 85.7 0.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_43592_length_459_cov_10943.733491_g10962_i1forward_frame_3 - 0.015 14.1 0.1 0.019 13.8 0.1 1.1 1 0 0 1 1 1 0 Peptidase C1-like family Chloroa_b-bind PF00504.21 ORF99892 - 7.3e-25 88.4 0.1 9.3e-25 88.0 0.1 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Duffy_binding PF05424.11 ORF98236 - 0.0013 18.8 6.8 0.0016 18.6 6.8 1.1 1 0 0 1 1 1 1 Duffy binding domain EMP24_GP25L PF01105.24 ORF97797 - 7.8e-11 42.2 3.9 9.2e-11 42.0 3.9 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD AsnC_trans_reg PF01037.21 ORF9777 - 4.1e-18 65.1 0.1 7e-18 64.4 0.1 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 ORF9777 - 7.4e-14 51.0 0.0 1.2e-13 50.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 ORF9777 - 2.3e-13 49.7 0.0 4.6e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 ORF9777 - 3.6e-06 26.9 0.0 6.8e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 ORF9777 - 5.5e-05 23.0 0.0 0.00011 22.1 0.0 1.5 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 ORF9777 - 8.8e-05 22.3 0.0 0.00014 21.6 0.0 1.3 1 0 0 1 1 1 1 MarR family B-block_TFIIIC PF04182.12 ORF9777 - 0.0039 17.3 0.1 0.024 14.8 0.0 2.0 2 0 0 2 2 2 1 B-block binding subunit of TFIIIC HTH_5 PF01022.20 ORF9777 - 0.007 16.2 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_28 PF13518.6 ORF9777 - 0.0081 16.3 0.0 0.016 15.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_41 PF14502.6 ORF9777 - 0.0093 15.6 0.1 0.065 12.9 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 ORF9777 - 0.03 14.1 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_10 PF04967.12 ORF9777 - 0.051 13.4 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain Sigma70_r4_2 PF08281.12 ORF9777 - 0.052 13.2 0.0 0.099 12.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 ORF9777 - 0.059 13.3 0.0 0.093 12.7 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_34 PF13601.6 ORF9777 - 0.06 13.5 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR PF01047.22 ORF9777 - 0.071 13.0 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 MarR family KASH_CCD PF14662.6 ORF97544 - 0.063 13.1 5.1 0.098 12.5 5.1 1.3 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH BRO1 PF03097.18 ORF97544 - 0.088 11.6 1.6 2 7.2 0.2 2.0 1 1 1 2 2 2 0 BRO1-like domain PEP-utilisers_N PF05524.13 ORF97544 - 0.5 10.6 5.1 0.24 11.5 0.7 2.1 2 0 0 2 2 2 0 PEP-utilising enzyme, N-terminal Fungal_TACC PF12709.7 ORF97544 - 0.51 10.8 2.9 0.4 11.2 1.3 1.6 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF1192 PF06698.11 ORF97544 - 3.3 7.8 11.2 7.7 6.7 2.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) ERM PF00769.19 ORF97544 - 3.5 7.4 17.2 1.4 8.7 4.0 2.0 2 0 0 2 2 2 0 Ezrin/radixin/moesin family ADIP PF11559.8 ORF97544 - 3.6 7.7 10.2 0.58 10.2 4.8 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Cep57_CLD_2 PF14197.6 ORF97544 - 5.9 7.1 12.8 6 7.0 2.6 2.6 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 EmrE PF13536.6 ORF95573 - 0.013 15.1 1.0 0.016 14.8 1.0 1.2 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter EamA PF00892.20 ORF95573 - 0.015 15.5 10.7 0.022 14.9 10.7 1.3 1 1 0 1 1 1 0 EamA-like transporter family Clavanin PF05452.11 ORF95573 - 0.031 14.5 0.1 0.054 13.7 0.1 1.4 1 0 0 1 1 1 0 Clavanin Phage_holin_2_4 PF16082.5 ORF95573 - 0.29 10.9 3.0 1.8 8.3 0.3 2.3 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like EmrE PF13536.6 ORF95145 - 0.013 15.1 1.0 0.016 14.8 1.0 1.2 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter EamA PF00892.20 ORF95145 - 0.015 15.5 10.7 0.022 14.9 10.7 1.3 1 1 0 1 1 1 0 EamA-like transporter family Clavanin PF05452.11 ORF95145 - 0.031 14.5 0.1 0.054 13.7 0.1 1.4 1 0 0 1 1 1 0 Clavanin Phage_holin_2_4 PF16082.5 ORF95145 - 0.29 10.9 3.0 1.8 8.3 0.3 2.3 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like HEAT PF02985.22 ORF94416 - 3.6e-07 29.9 0.0 0.027 14.7 0.0 2.6 2 0 0 2 2 2 2 HEAT repeat HEAT_2 PF13646.6 ORF94416 - 7.9e-06 26.2 0.0 1.4e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 HEAT repeats HEAT_EZ PF13513.6 ORF94416 - 0.0028 18.1 0.0 2.1 8.9 0.0 2.3 2 0 0 2 2 2 2 HEAT-like repeat Atx10homo_assoc PF09759.9 ORF94416 - 0.0041 17.1 0.0 0.13 12.3 0.0 2.2 2 0 0 2 2 2 1 Spinocerebellar ataxia type 10 protein domain DUF3361 PF11841.8 ORF94416 - 0.0055 16.6 0.2 0.45 10.4 0.0 2.2 1 1 1 2 2 2 2 Domain of unknown function (DUF3361) SIL1 PF16782.5 ORF94416 - 0.011 15.0 0.0 0.011 14.9 0.0 1.1 1 0 0 1 1 1 0 Nucleotide exchange factor SIL1 DUF3060 PF11259.8 ORF93607 - 0.061 13.0 0.0 12 5.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3060) ELFV_dehydrog_N PF02812.18 ORF93380 - 0.15 12.0 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DNA_methylase PF00145.17 ORF92469 - 1.8e-06 27.5 0.0 2.9e-05 23.6 0.0 1.9 2 0 0 2 2 2 2 C-5 cytosine-specific DNA methylase T3SS_TC PF06511.11 ORF91185 - 0.11 11.9 2.5 0.091 12.1 0.2 1.8 1 1 1 2 2 2 0 Type III secretion systems tip complex components NgoMIV_restric PF09015.10 ORF90500 - 0.039 13.1 0.2 0.047 12.8 0.2 1.2 1 0 0 1 1 1 0 NgoMIV restriction enzyme Pkinase PF00069.25 ORF89546 - 5.9e-19 68.5 0.1 6.8e-19 68.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF89546 - 3e-12 46.4 0.0 3.4e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF89546 - 0.034 14.1 0.0 2.5 8.0 0.0 2.0 2 0 0 2 2 2 0 Phosphotransferase enzyme family DUF3431 PF11913.8 ORF89507 - 0.00057 19.7 0.0 0.00074 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3431) ENTH PF01417.20 ORF89357 - 3.3e-18 65.9 0.2 4.8e-18 65.4 0.2 1.2 1 0 0 1 1 1 1 ENTH domain FA_desaturase PF00487.24 ORF88285 - 7 6.4 10.8 8.1 6.2 10.8 1.2 1 0 0 1 1 1 0 Fatty acid desaturase Ribosomal_L24e PF01246.20 ORF87395 - 1.5e-23 82.8 0.3 1.5e-23 82.8 0.3 2.0 2 1 0 2 2 2 1 Ribosomal protein L24e DUF775 PF05603.12 ORF87395 - 0.062 12.8 1.0 0.069 12.7 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF775) GATA PF00320.27 ORF87395 - 0.25 11.0 1.9 0.64 9.7 1.9 1.8 1 1 0 1 1 1 0 GATA zinc finger CitMHS PF03600.16 ORF8629 - 0.068 12.4 0.1 0.068 12.4 0.1 1.1 1 0 0 1 1 1 0 Citrate transporter Phage_integrase PF00589.22 ORF85506 - 0.044 13.6 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 Phage integrase family Birna_VP4 PF01768.16 ORF85506 - 0.12 12.1 1.0 0.17 11.7 1.0 1.1 1 0 0 1 1 1 0 Birnavirus VP4 protein Mito_fiss_reg PF05308.11 ORF85233 - 0.014 15.5 3.2 0.019 15.1 3.2 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator HTH_Tnp_4 PF13613.6 ORF85140 - 0.013 15.2 0.1 3.8 7.3 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease zf-RING_12 PF17976.1 ORF85140 - 0.026 14.8 1.5 1 9.7 0.0 2.9 2 1 1 3 3 3 0 RING/Ubox like zinc-binding domain EF-hand_1 PF00036.32 ORF83834 - 4e-24 82.3 11.6 1.8e-06 27.1 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF83834 - 9.4e-21 74.0 5.0 1.1e-11 45.0 1.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF83834 - 1.1e-18 65.8 15.0 0.00023 20.5 0.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF83834 - 2.3e-18 64.5 6.9 1.1e-05 24.9 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF83834 - 1.6e-08 34.8 0.2 0.0042 17.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF83834 - 4.2e-07 29.7 11.0 0.018 14.9 2.8 4.4 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF83834 - 0.00035 20.5 4.8 1.1 9.3 1.1 3.7 1 1 3 4 4 4 3 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF83834 - 0.019 14.9 0.5 5.9 6.8 0.0 3.1 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF83834 - 0.026 14.7 5.0 12 6.1 4.4 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF83834 - 0.056 13.8 0.0 0.84 10.0 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain CPBP PF02517.16 ORF83196 - 4.1e-06 27.1 4.0 1.8e-05 25.0 4.2 1.9 1 1 1 2 2 2 1 CPBP intramembrane metalloprotease DUF382 PF04037.13 ORF82961 - 0.0049 17.0 0.0 0.0049 17.0 0.0 3.1 2 1 0 3 3 3 1 Domain of unknown function (DUF382) Neur_chan_memb PF02932.16 ORF82961 - 2.4 8.2 8.5 2.9 7.9 8.5 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region PBP1_TM PF14812.6 ORF82961 - 2.6 8.5 15.3 0.35 11.3 7.7 2.2 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Helicase_C PF00271.31 ORF82428 - 1e-25 90.2 0.0 1.9e-25 89.4 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF82428 - 0.00012 21.3 0.0 0.00015 21.1 0.0 1.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Spiralin PF05215.13 ORF82428 - 0.012 14.9 0.7 3.1 7.1 0.3 2.1 1 1 1 2 2 2 0 Spiralin EF-hand_1 PF00036.32 ORF82155 - 6.2e-09 34.8 0.3 0.00033 20.0 0.1 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF82155 - 2e-08 33.5 0.1 0.00052 19.7 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF82155 - 1e-07 31.7 0.3 0.0014 18.4 0.1 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF82155 - 3.8e-07 30.5 0.2 1.7e-05 25.2 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF82155 - 9e-05 21.8 4.6 0.046 13.2 0.9 3.0 3 1 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF82155 - 0.02 15.2 0.0 0.11 12.9 0.0 2.0 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EmrE PF13536.6 ORF81605 - 0.013 15.1 1.0 0.016 14.8 1.0 1.2 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter EamA PF00892.20 ORF81605 - 0.015 15.5 10.7 0.022 14.9 10.7 1.3 1 1 0 1 1 1 0 EamA-like transporter family Clavanin PF05452.11 ORF81605 - 0.031 14.5 0.1 0.054 13.7 0.1 1.4 1 0 0 1 1 1 0 Clavanin Phage_holin_2_4 PF16082.5 ORF81605 - 0.29 10.9 3.0 1.8 8.3 0.3 2.3 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like CLN3 PF02487.17 ORF81241 - 1.6e-16 60.4 1.4 1.9e-16 60.1 1.4 1.0 1 0 0 1 1 1 1 CLN3 protein MFS_1 PF07690.16 ORF81241 - 0.00064 18.7 12.6 0.00077 18.5 12.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Asp-B-Hydro_N PF05279.11 ORF80488 - 1.3 9.0 24.2 1.6 8.8 24.2 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Aminotran_5 PF00266.19 ORF80220 - 1.7e-50 172.1 0.0 1.9e-50 171.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Oleosin PF01277.17 ORF79298 - 0.079 12.7 0.3 0.12 12.1 0.3 1.2 1 0 0 1 1 1 0 Oleosin Form_Nir_trans PF01226.17 ORF791 - 0.032 13.6 1.4 0.043 13.1 1.4 1.2 1 0 0 1 1 1 0 Formate/nitrite transporter zf-C2H2 PF00096.26 ORF75768 - 4.6e-14 52.0 20.8 1.9e-07 31.2 1.2 4.1 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF75768 - 2.2e-10 40.5 13.3 0.00013 22.5 0.5 3.6 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF75768 - 2.7e-09 37.0 18.6 3.9e-07 30.2 0.2 4.4 4 1 0 4 4 4 2 Zinc-finger double domain zf-Di19 PF05605.12 ORF75768 - 5.6e-05 23.3 7.9 0.031 14.6 0.3 2.7 1 1 0 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_11 PF16622.5 ORF75768 - 0.00076 19.2 5.0 0.37 10.6 0.2 2.7 2 0 0 2 2 2 2 zinc-finger C2H2-type Rpr2 PF04032.16 ORF75768 - 0.001 19.3 7.5 0.026 14.8 0.8 2.8 1 1 2 3 3 3 2 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-C2H2_6 PF13912.6 ORF75768 - 0.001 19.0 13.1 0.028 14.4 0.9 3.2 3 0 0 3 3 2 2 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 ORF75768 - 0.0015 18.6 2.5 0.041 14.0 0.2 2.7 2 1 0 2 2 2 1 Zinc ribbon domain zf-BED PF02892.15 ORF75768 - 0.0031 17.5 3.0 0.0031 17.5 3.0 3.6 2 1 1 4 4 3 1 BED zinc finger GAGA PF09237.11 ORF75768 - 0.0053 16.5 0.0 0.0093 15.8 0.0 1.4 1 0 0 1 1 1 1 GAGA factor zf-C2H2_2 PF12756.7 ORF75768 - 0.0066 16.8 9.2 0.12 12.8 1.5 2.4 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-C2H2_3rep PF18868.1 ORF75768 - 0.011 16.4 2.8 0.021 15.5 1.2 2.1 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-AN1 PF01428.16 ORF75768 - 0.011 15.8 4.4 1.4 9.2 0.7 3.1 2 1 0 2 2 2 0 AN1-like Zinc finger zf-C2H2_jaz PF12171.8 ORF75768 - 0.016 15.5 9.0 0.47 10.8 1.4 3.2 3 1 0 3 3 2 0 Zinc-finger double-stranded RNA-binding zf-C2HC_2 PF13913.6 ORF75768 - 0.029 14.3 4.5 1.2 9.2 0.4 2.7 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-met PF12874.7 ORF75768 - 0.039 14.3 4.0 0.1 13.0 0.0 3.1 3 0 0 3 3 2 0 Zinc-finger of C2H2 type FYDLN_acid PF09538.10 ORF75768 - 0.051 14.3 0.9 1.9 9.2 0.8 2.2 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) zinc_ribbon_9 PF14369.6 ORF75768 - 0.059 13.6 0.1 2.9 8.2 0.0 2.6 3 0 0 3 3 2 0 zinc-ribbon zf_UBZ PF18439.1 ORF75768 - 0.069 12.8 2.5 1.1 8.9 0.1 2.8 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger PyrI_C PF02748.15 ORF75768 - 0.085 12.8 1.0 0.085 12.8 1.0 3.6 3 1 1 4 4 4 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-ribbon_3 PF13248.6 ORF75768 - 0.087 12.3 5.5 0.95 9.0 0.1 3.3 4 0 0 4 4 3 0 zinc-ribbon domain Acp26Ab PF05777.12 ORF75768 - 0.098 13.3 0.0 0.16 12.7 0.0 1.3 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) CpXC PF14353.6 ORF75768 - 0.099 12.7 3.5 2.2 8.3 0.2 2.3 1 1 1 2 2 2 0 CpXC protein zf-Dof PF02701.15 ORF75768 - 0.15 12.2 9.8 0.55 10.4 0.2 2.7 3 0 0 3 3 2 0 Dof domain, zinc finger zinc_ribbon_15 PF17032.5 ORF75768 - 0.2 12.4 6.7 0.17 12.7 0.9 2.4 1 1 1 2 2 2 0 zinc-ribbon family DZR PF12773.7 ORF75768 - 0.26 11.3 6.3 0.93 9.6 4.8 2.5 1 1 1 2 2 2 0 Double zinc ribbon C1_2 PF03107.16 ORF75768 - 0.27 11.6 5.5 3.3 8.1 0.5 3.4 3 0 0 3 3 3 0 C1 domain ARS2 PF04959.13 ORF75768 - 0.3 11.5 2.8 1.1 9.6 0.2 2.1 1 1 1 2 2 2 0 Arsenite-resistance protein 2 FYVE PF01363.21 ORF75768 - 0.3 11.3 7.2 0.12 12.5 3.7 2.2 1 1 1 2 2 2 0 FYVE zinc finger TRAF6_Z2 PF18048.1 ORF75768 - 0.43 10.7 3.2 0.34 11.0 0.7 2.2 2 1 0 2 2 2 0 TNF receptor-associated factor 6 zinc finger 2 zinc-ribbons_6 PF07191.12 ORF75768 - 0.52 10.3 4.9 5.7 7.0 5.0 2.3 1 1 0 1 1 1 0 zinc-ribbons FOXP-CC PF16159.5 ORF75768 - 0.85 10.3 5.7 36 5.1 0.2 3.2 1 1 2 3 3 3 0 FOXP coiled-coil domain TF_Zn_Ribbon PF08271.12 ORF75768 - 1 8.9 5.3 6.1 6.4 2.8 2.9 1 1 1 2 2 2 0 TFIIB zinc-binding zf_Hakai PF18408.1 ORF75768 - 1.1 9.1 6.6 2.1 8.1 1.0 2.9 2 1 1 3 3 3 0 C2H2 Hakai zinc finger domain zf-CHCC PF10276.9 ORF75768 - 1.1 9.3 8.2 1.2 9.3 1.9 2.9 3 0 0 3 3 3 0 Zinc-finger domain IBR PF01485.21 ORF75768 - 1.1 9.5 9.3 0.16 12.2 3.1 2.3 1 1 2 3 3 3 0 IBR domain, a half RING-finger domain zf_ZIC PF18366.1 ORF75768 - 1.2 9.3 7.4 0.71 10.0 0.5 3.2 2 1 1 3 3 3 0 Zic proteins zinc finger domain DUF2256 PF10013.9 ORF75768 - 2.2 8.5 10.0 4 7.6 0.1 3.5 3 1 1 4 4 3 0 Uncharacterized protein conserved in bacteria (DUF2256) HNH PF01844.23 ORF75768 - 5.2 7.3 8.7 0.78 10.0 0.7 3.0 3 0 0 3 3 2 0 HNH endonuclease ADK_lid PF05191.14 ORF75768 - 9.3 6.3 10.6 26 4.9 0.1 2.7 2 1 0 2 2 2 0 Adenylate kinase, active site lid zf-ISL3 PF14690.6 ORF75768 - 9.8 6.9 11.0 2.4e+03 -0.7 11.0 2.7 1 1 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1595 PF12760.7 ORF75768 - 9.8 6.3 12.0 2.2 8.3 7.0 2.4 2 1 0 2 2 2 0 Transposase zinc-ribbon domain zf-C2H2 PF00096.26 ORF74112 - 2.9e-18 65.2 19.1 3e-06 27.4 4.8 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF74112 - 7.1e-12 45.1 15.5 0.00059 20.5 2.9 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF74112 - 2.3e-09 37.3 16.5 1.3e-05 25.4 1.2 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF74112 - 0.00022 20.9 5.3 0.00022 20.9 5.3 3.6 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF74112 - 0.00025 21.3 1.3 0.00025 21.3 1.3 2.2 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_jaz PF12171.8 ORF74112 - 0.00055 20.1 2.2 0.00055 20.1 2.2 3.1 2 1 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF74112 - 0.004 17.5 13.1 0.016 15.6 1.0 3.6 3 2 0 3 3 3 1 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF74112 - 0.0058 16.9 12.4 0.13 12.6 3.6 2.9 1 1 2 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 ORF74112 - 0.014 15.1 3.1 0.018 14.8 0.3 2.3 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 ORF74112 - 0.026 14.5 18.0 0.07 13.1 1.6 3.0 3 1 0 3 3 3 0 C2H2-type zinc finger Mut7-C PF01927.16 ORF74112 - 0.089 12.9 5.3 0.13 12.3 5.2 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain Actin_micro PF17003.5 ORF74112 - 0.1 11.7 9.3 1.1 8.4 2.2 2.2 1 1 1 2 2 2 0 Putative actin-like family Zn-ribbon_8 PF09723.10 ORF74112 - 0.11 12.6 6.6 0.55 10.4 0.3 3.0 3 0 0 3 3 2 0 Zinc ribbon domain DUF629 PF04780.12 ORF74112 - 0.13 10.7 8.7 0.29 9.6 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF629) PriA_CRR PF18319.1 ORF74112 - 0.28 11.2 6.4 0.68 10.0 3.1 2.6 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain PyrI_C PF02748.15 ORF74112 - 0.33 10.9 10.5 1.1 9.3 0.7 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zinc_ribbon_15 PF17032.5 ORF74112 - 0.75 10.6 8.9 0.36 11.6 5.7 2.0 1 1 2 3 3 3 0 zinc-ribbon family zf-AN1 PF01428.16 ORF74112 - 2.3 8.4 9.2 9.4 6.5 0.4 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger zf-C2HE PF16278.5 ORF74112 - 2.7 8.5 11.3 1.7 9.1 3.0 2.7 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger TFIIS_C PF01096.18 ORF74112 - 4.2 7.3 10.5 2.2 8.2 0.5 3.2 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) C1_4 PF07975.12 ORF74112 - 9.8 6.5 9.5 45 4.4 7.1 2.6 1 1 2 3 3 3 0 TFIIH C1-like domain Mito_fiss_reg PF05308.11 ORF74052 - 0.014 15.5 3.2 0.019 15.1 3.2 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator DAP PF15228.6 ORF7398 - 0.62 11.3 4.1 0.36 12.0 0.8 2.0 1 1 1 2 2 2 0 Death-associated protein HEXIM PF15313.6 ORF7398 - 4.3 7.5 10.5 1.2 9.3 3.5 2.1 2 0 0 2 2 2 0 Hexamethylene bis-acetamide-inducible protein AGS_C PF18134.1 ORF73505 - 0.39 10.7 6.2 0.45 10.5 5.6 1.5 1 1 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain FMN_red PF03358.15 ORF73355 - 8.4e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 NADPH-dependent FMN reductase DUF4149 PF13664.6 ORF73045 - 0.043 14.1 0.9 1.2 9.5 0.1 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4149) Gluconate_2-dh3 PF13618.6 ORF72774 - 0.083 13.1 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 VWA_CoxE PF05762.14 ORF72482 - 2.9e-43 147.8 0.1 3.2e-43 147.7 0.1 1.0 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 ORF72482 - 3.6e-05 24.4 0.0 7e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF72482 - 0.002 18.4 0.0 0.0023 18.2 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain NrfD PF03916.14 ORF72482 - 0.012 15.3 0.1 0.015 15.0 0.1 1.2 1 0 0 1 1 1 0 Polysulphide reductase, NrfD Sugar_tr PF00083.24 ORF72478 - 2.3e-07 30.0 0.7 4.5e-07 29.1 0.7 1.4 1 1 0 1 1 1 1 Sugar (and other) transporter ADH_N PF08240.12 ORF71268 - 1.1e-07 31.7 0.1 1.6e-07 31.2 0.1 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Pns11_12 PF17464.2 ORF69548 - 0.022 14.5 7.2 0.027 14.2 7.2 1.0 1 0 0 1 1 1 0 Non-structural protein 11 and 12 EF-hand_1 PF00036.32 ORF69496 - 4e-24 82.3 11.6 1.8e-06 27.1 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF69496 - 9.4e-21 74.0 5.0 1.1e-11 45.0 1.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF69496 - 1.1e-18 65.8 15.0 0.00023 20.5 0.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF69496 - 2.3e-18 64.5 6.9 1.1e-05 24.9 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF69496 - 1.6e-08 34.8 0.2 0.0042 17.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF69496 - 4.2e-07 29.7 11.0 0.018 14.9 2.8 4.4 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF69496 - 0.00035 20.5 4.8 1.1 9.3 1.1 3.7 1 1 3 4 4 4 3 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF69496 - 0.019 14.9 0.5 5.9 6.8 0.0 3.1 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF69496 - 0.026 14.7 5.0 12 6.1 4.4 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF69496 - 0.056 13.8 0.0 0.84 10.0 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain Actin PF00022.19 ORF67546 - 1.9e-51 175.0 0.0 1.1e-50 172.4 0.0 1.8 1 1 0 1 1 1 1 Actin Methyltransf_29 PF03141.16 ORF67546 - 0.14 10.7 0.0 0.16 10.5 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase SIT PF15330.6 ORF67260 - 0.13 12.8 0.7 0.23 11.9 0.7 1.4 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT S1FA PF04689.13 ORF67260 - 0.19 11.9 2.0 0.87 9.8 0.0 2.3 2 0 0 2 2 2 0 DNA binding protein S1FA DUF4006 PF13179.6 ORF67260 - 0.62 10.0 0.0 0.62 10.0 0.0 2.3 3 0 0 3 3 3 0 Family of unknown function (DUF4006) FixS PF03597.15 ORF67260 - 5.1 6.9 8.3 0.65 9.7 2.2 2.4 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type Methyltransf_31 PF13847.6 ORF67069 - 1.7e-14 53.9 0.3 2.7e-14 53.2 0.3 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF67069 - 4.6e-08 33.7 0.0 7e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF67069 - 0.00022 21.1 0.0 0.00029 20.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.12 ORF67069 - 0.00023 21.8 0.0 0.00034 21.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.13 ORF67069 - 0.0016 18.0 0.2 0.0022 17.6 0.2 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 Ubie_methyltran PF01209.18 ORF67069 - 0.0099 15.2 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF67069 - 0.042 14.6 0.1 0.064 14.0 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF67069 - 0.15 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Sugar_tr PF00083.24 ORF6683 - 5.5e-18 65.1 9.3 6.1e-18 64.9 9.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF6683 - 2.5e-08 33.2 13.0 4.1e-08 32.5 12.9 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily Erv26 PF04148.13 ORF66629 - 0.017 15.0 0.1 0.022 14.6 0.1 1.1 1 0 0 1 1 1 0 Transmembrane adaptor Erv26 Na_H_antiporter PF03553.14 ORF6645 - 0.032 13.4 0.0 0.038 13.2 0.0 1.1 1 0 0 1 1 1 0 Na+/H+ antiporter family ERGIC_N PF13850.6 ORF66070 - 0.0092 16.3 2.4 0.011 16.0 1.0 1.8 2 0 0 2 2 2 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) LPP20 PF02169.16 ORF66070 - 0.027 14.8 1.0 0.054 13.8 1.0 1.5 1 0 0 1 1 1 0 LPP20 lipoprotein Wzy_C_2 PF11846.8 ORF66070 - 0.037 14.0 0.1 0.052 13.5 0.1 1.3 1 1 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal Minor_capsid_1 PF10665.9 ORF6581 - 0.0066 16.6 0.2 0.01 16.0 0.2 1.4 1 0 0 1 1 1 1 Minor capsid protein p450 PF00067.22 ORF6569 - 3.8e-09 35.8 0.0 5e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 CD36 PF01130.21 ORF64493 - 4.9e-05 22.0 0.0 6.3e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 CD36 family DUF4801 PF16059.5 ORF63818 - 0.015 15.3 1.7 0.31 11.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4801) Kelch_2 PF07646.15 ORF6193 - 1.4e-14 53.4 1.7 2.8e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 ORF6193 - 2.1e-14 53.4 0.4 1.6e-08 34.6 0.1 2.4 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF6193 - 8.1e-14 51.3 0.2 6e-07 29.5 0.1 2.4 1 1 1 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF6193 - 6.4e-13 48.1 0.0 2.3e-05 23.9 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF6193 - 7e-13 48.3 0.1 2.4e-07 30.6 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF6193 - 8.3e-13 48.1 3.2 1.1e-05 25.4 0.3 2.4 2 1 0 2 2 2 2 Galactose oxidase, central domain RTP1_C2 PF10304.9 ORF608 - 0.081 12.6 2.8 0.16 11.7 2.8 1.5 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 2 SPG48 PF14764.6 ORF608 - 0.13 12.8 0.2 0.17 12.3 0.2 1.3 1 0 0 1 1 1 0 AP-5 complex subunit, vesicle trafficking HTH_18 PF12833.7 ORF60638 - 8.1e-22 77.3 0.9 1.4e-21 76.6 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF60638 - 1.1e-18 66.8 0.1 3.2e-12 46.2 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_31 PF13560.6 ORF60638 - 0.0036 17.6 0.0 0.028 14.8 0.0 2.1 1 1 1 2 2 2 2 Helix-turn-helix domain Baculo_LEF-11 PF06385.12 ORF60638 - 0.1 13.1 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 Baculovirus LEF-11 protein ABC_tran PF00005.27 ORF5993 - 1.7e-14 54.5 0.0 2.4e-14 54.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF5993 - 0.006 16.0 0.0 0.0063 16.0 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain cNMP_binding PF00027.29 ORF59655 - 5.9e-06 26.3 0.0 8.5e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF3035 PF11233.8 ORF59642 - 0.022 15.1 4.3 0.022 15.1 4.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3035) DEAD_assoc PF08494.11 ORF59642 - 0.17 11.7 3.3 0.2 11.4 3.3 1.1 1 0 0 1 1 1 0 DEAD/H associated FDF PF09532.10 ORF59642 - 1 10.3 8.2 0.25 12.3 2.6 2.2 1 1 1 2 2 2 0 FDF domain UQ_con PF00179.26 ORF58897 - 3.9e-54 182.1 0.0 4.4e-54 181.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF58897 - 0.00031 20.4 0.0 0.00039 20.1 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF58897 - 0.0049 17.1 0.1 0.0049 17.1 0.1 1.3 1 0 0 1 1 1 1 RWD domain UEV PF05743.13 ORF58897 - 0.035 14.0 0.0 0.058 13.3 0.0 1.4 1 0 0 1 1 1 0 UEV domain HTH_Tnp_4 PF13613.6 ORF5874 - 0.013 15.2 0.1 3.8 7.3 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease zf-RING_12 PF17976.1 ORF5874 - 0.026 14.8 1.5 1 9.7 0.0 2.9 2 1 1 3 3 3 0 RING/Ubox like zinc-binding domain Clat_adaptor_s PF01217.20 ORF56610 - 2.3e-52 176.7 0.8 2.6e-52 176.5 0.8 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain ubiquitin PF00240.23 ORF55122 - 1.1e-08 34.6 0.0 1.8e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Ribosomal_S14 PF00253.21 ORF55122 - 5.6e-06 26.0 0.8 1.1e-05 25.1 0.8 1.5 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e Rad60-SLD PF11976.8 ORF55122 - 0.025 14.4 0.0 0.036 13.9 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF55122 - 0.18 12.2 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-like domain PCDO_beta_N PF12391.8 ORF54409 - 0.029 14.0 2.0 0.3 10.7 0.2 2.3 2 0 0 2 2 2 0 Protocatechuate 3,4-dioxygenase beta subunit N terminal OSR1_C PF12202.8 ORF54395 - 0.0012 19.0 11.2 4.7 7.5 0.3 4.7 2 2 3 5 5 5 3 Oxidative-stress-responsive kinase 1 C-terminal domain DUF4844 PF16133.5 ORF54395 - 0.12 12.9 3.6 0.55 10.8 0.3 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4844) DUF1699 PF08004.11 ORF54395 - 0.19 11.4 5.6 0.81 9.4 1.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1699) T_cell_tran_alt PF15128.6 ORF54395 - 0.28 11.0 2.2 1.8 8.4 0.3 2.7 1 1 1 3 3 3 0 T-cell leukemia translocation-altered DUF4728 PF15860.5 ORF54395 - 5.7 7.7 8.3 4 8.2 0.8 2.9 1 1 3 4 4 4 0 Domain of unknown function (DUF4728) GSH-S_ATP PF02955.16 ORF54373 - 2.6e-61 206.0 0.0 3e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain RimK PF08443.11 ORF54373 - 4.7e-09 36.1 0.0 5.3e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain DUF2491 PF10679.9 ORF5406 - 0.00083 18.6 1.9 0.001 18.3 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2491) LolA_like PF17131.4 ORF5406 - 0.018 14.8 0.3 0.021 14.6 0.3 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein-sorting protein RNA_pol_Rpb8 PF03870.15 ORF53812 - 0.039 14.2 0.4 0.051 13.8 0.4 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb8 DUF1048 PF06304.11 ORF53812 - 0.12 12.8 0.3 0.34 11.4 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1048) B2-adapt-app_C PF09066.10 ORF52261 - 5.2e-05 23.3 0.0 0.00012 22.2 0.0 1.7 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain NUDIX PF00293.28 ORF51322 - 2.3e-09 37.4 0.1 3.4e-09 36.8 0.1 1.4 1 0 0 1 1 1 1 NUDIX domain zf-C2H2 PF00096.26 ORF51141 - 1.7e-18 65.9 16.9 1.6e-06 28.3 2.4 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF51141 - 3.8e-12 45.9 13.9 0.00038 21.1 1.4 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF51141 - 4e-09 36.5 14.1 4.8e-05 23.6 0.3 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF51141 - 5.7e-07 29.2 3.1 5.7e-07 29.2 3.1 3.4 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF51141 - 4.8e-06 26.8 9.5 0.00013 22.2 0.5 2.2 1 1 1 2 2 2 2 C2H2-type zinc ribbon zf-met PF12874.7 ORF51141 - 0.00042 20.6 11.9 0.0065 16.8 0.8 3.4 3 1 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF51141 - 0.0011 19.2 9.6 0.015 15.7 0.7 2.9 1 1 2 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 ORF51141 - 0.0017 18.0 2.8 0.0075 16.0 0.2 2.4 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 ORF51141 - 0.008 16.2 14.9 0.12 12.4 2.7 3.0 3 1 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF51141 - 0.0087 16.3 1.9 0.0087 16.3 1.9 2.7 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding Rubredoxin PF00301.20 ORF51141 - 0.03 14.3 0.7 0.13 12.3 0.7 2.1 1 1 0 1 1 1 0 Rubredoxin CxC3 PF18804.1 ORF51141 - 0.047 13.5 0.5 0.12 12.2 0.5 1.7 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases Actin_micro PF17003.5 ORF51141 - 0.05 12.8 7.1 0.81 8.8 1.4 2.2 1 1 1 2 2 2 0 Putative actin-like family Mut7-C PF01927.16 ORF51141 - 0.063 13.4 4.3 0.05 13.7 2.5 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.10 ORF51141 - 0.094 12.8 6.4 0.49 10.6 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zinc_ribbon_15 PF17032.5 ORF51141 - 0.31 11.8 7.6 0.13 13.0 4.6 1.9 1 1 1 2 2 2 0 zinc-ribbon family DUF629 PF04780.12 ORF51141 - 0.53 8.7 5.7 0.34 9.4 0.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF629) PyrI_C PF02748.15 ORF51141 - 0.78 9.7 8.0 4.1 7.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-LYAR PF08790.11 ORF51141 - 0.83 9.6 6.4 0.6 10.1 0.3 3.1 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger zf-BED PF02892.15 ORF51141 - 2.7 8.1 13.7 7 6.8 1.8 2.8 1 1 1 2 2 2 0 BED zinc finger zf-AN1 PF01428.16 ORF51141 - 3.3 8.0 9.5 9.5 6.5 0.5 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger ERGIC_N PF13850.6 ORF50247 - 0.0052 17.1 0.6 0.019 15.3 0.7 1.9 2 0 0 2 2 2 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) EBV-NA3 PF05009.12 ORF47314 - 0.089 12.3 0.2 0.13 11.8 0.2 1.2 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) BAAT_C PF08840.11 ORF47314 - 0.089 12.7 0.3 0.11 12.4 0.3 1.1 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Csm1_B PF18211.1 ORF45903 - 0.019 14.8 1.2 0.2 11.5 0.1 2.2 1 1 1 2 2 2 0 Csm1 subunit domain B DUF4830 PF16112.5 ORF45903 - 0.094 13.2 0.8 0.16 12.5 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Polo_box_3 PF18544.1 ORF45903 - 1.3 9.7 6.4 0.25 12.0 0.9 2.2 1 1 2 3 3 3 0 Polo box domain DHC PF09626.10 ORF45903 - 1.5 9.7 4.4 1 10.2 1.3 1.9 1 1 1 2 2 2 0 Dihaem cytochrome c LysR_substrate PF03466.20 ORF44099 - 4.4e-28 98.1 0.0 4.8e-28 98.0 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain ELFV_dehydrog_N PF02812.18 ORF43405 - 0.15 12.0 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Pkinase PF00069.25 ORF42734 - 3.3e-20 72.6 0.3 3.9e-20 72.3 0.3 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42734 - 2.6e-11 43.3 0.1 3.1e-11 43.1 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 ORF42734 - 0.091 12.9 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 ABC1 family DUF4229 PF14012.6 ORF424 - 0.0016 18.5 1.0 0.0016 18.5 1.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF4229) Arteri_Gl PF00951.18 ORF424 - 4 7.2 10.1 3.1 7.6 8.3 1.6 1 1 1 2 2 2 0 Arterivirus GL envelope glycoprotein EMP24_GP25L PF01105.24 ORF41838 - 4.8e-17 62.5 0.0 5.2e-17 62.4 0.0 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD FGF PF00167.18 ORF41373 - 0.15 12.2 0.0 0.96 9.6 0.0 1.9 1 1 0 1 1 1 0 Fibroblast growth factor DAP PF15228.6 ORF40398 - 0.62 11.3 4.1 0.36 12.0 0.8 2.0 1 1 1 2 2 2 0 Death-associated protein HEXIM PF15313.6 ORF40398 - 4.3 7.5 10.5 1.2 9.3 3.5 2.1 2 0 0 2 2 2 0 Hexamethylene bis-acetamide-inducible protein EP400_N PF15790.5 ORF39895 - 0.23 10.3 0.1 0.28 10.0 0.1 1.1 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal PhoLip_ATPase_N PF16209.5 ORF38813 - 2.1e-17 62.5 0.1 4e-17 61.7 0.1 1.5 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal DUF382 PF04037.13 ORF37235 - 0.0049 17.0 0.0 0.0049 17.0 0.0 3.1 2 1 0 3 3 3 1 Domain of unknown function (DUF382) Neur_chan_memb PF02932.16 ORF37235 - 2.4 8.2 8.5 2.9 7.9 8.5 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region PBP1_TM PF14812.6 ORF37235 - 2.6 8.5 15.3 0.35 11.3 7.7 2.2 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal EF-hand_1 PF00036.32 ORF36758 - 4e-24 82.3 11.6 1.8e-06 27.1 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF36758 - 9.4e-21 74.0 5.0 1.1e-11 45.0 1.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF36758 - 1.1e-18 65.8 15.0 0.00023 20.5 0.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF36758 - 2.3e-18 64.5 6.9 1.1e-05 24.9 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF36758 - 1.6e-08 34.8 0.2 0.0042 17.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF36758 - 4.2e-07 29.7 11.0 0.018 14.9 2.8 4.4 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF36758 - 0.00035 20.5 4.8 1.1 9.3 1.1 3.7 1 1 3 4 4 4 3 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF36758 - 0.019 14.9 0.5 5.9 6.8 0.0 3.1 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF36758 - 0.026 14.7 5.0 12 6.1 4.4 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF36758 - 0.056 13.8 0.0 0.84 10.0 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain PIP49_N PF14875.6 ORF34079 - 0.053 13.4 1.7 0.061 13.2 0.7 1.6 1 1 1 2 2 2 0 N-term cysteine-rich ER, FAM69 NUDIX PF00293.28 ORF33430 - 2.3e-09 37.4 0.1 3.4e-09 36.8 0.1 1.4 1 0 0 1 1 1 1 NUDIX domain Penicillinase_R PF03965.16 ORF33062 - 0.023 15.1 0.0 0.035 14.5 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor Csm1_B PF18211.1 ORF32981 - 0.019 14.8 1.2 0.2 11.5 0.1 2.2 1 1 1 2 2 2 0 Csm1 subunit domain B DUF4830 PF16112.5 ORF32981 - 0.094 13.2 0.8 0.16 12.5 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Polo_box_3 PF18544.1 ORF32981 - 1.3 9.7 6.4 0.25 12.0 0.9 2.2 1 1 2 3 3 3 0 Polo box domain DHC PF09626.10 ORF32981 - 1.5 9.7 4.4 1 10.2 1.3 1.9 1 1 1 2 2 2 0 Dihaem cytochrome c Dopey_N PF04118.14 ORF32614 - 6.3e-32 110.9 0.2 6.9e-32 110.8 0.2 1.0 1 0 0 1 1 1 1 Dopey, N-terminal Tuberin PF03542.16 ORF32614 - 0.027 13.6 0.4 0.04 13.0 0.4 1.3 1 0 0 1 1 1 0 Tuberin C4bp_oligo PF18453.1 ORF32614 - 0.029 14.5 0.0 0.063 13.5 0.0 1.5 1 0 0 1 1 1 0 Oligomerization domain of C4b-binding protein alpha Ank_2 PF12796.7 ORF31316 - 1.7e-18 67.0 0.1 2.2e-08 34.6 0.2 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF31316 - 3.2e-17 60.8 1.2 0.00054 20.2 0.0 4.2 4 0 0 4 4 4 4 Ankyrin repeat Ank_4 PF13637.6 ORF31316 - 3e-14 53.2 1.3 2.3e-07 31.2 0.1 3.1 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF31316 - 1.2e-13 50.8 3.3 0.004 17.5 0.2 4.1 4 0 0 4 4 4 4 Ankyrin repeat Ank_5 PF13857.6 ORF31316 - 2.2e-12 46.9 2.1 0.00024 21.3 0.1 3.8 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Lactamase_B_5 PF14597.6 ORF31316 - 0.063 12.8 0.0 0.088 12.3 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily Sugar_tr PF00083.24 ORF30741 - 5.5e-18 65.1 9.3 6.1e-18 64.9 9.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF30741 - 2.5e-08 33.2 13.0 4.1e-08 32.5 12.9 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_1 PF07690.16 ORF28221 - 1.7e-05 23.9 4.6 2e-05 23.7 4.6 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF5444 PF17519.2 ORF28221 - 0.13 12.3 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5444) E2F_CC-MB PF16421.5 ORF27077 - 0.15 12.4 1.2 0.56 10.6 0.4 2.0 1 1 1 2 2 2 0 E2F transcription factor CC-MB domain zf-C2H2 PF00096.26 ORF26611 - 1.7e-18 65.9 16.9 1.6e-06 28.3 2.4 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF26611 - 3.8e-12 45.9 13.9 0.00038 21.1 1.4 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF26611 - 4e-09 36.5 14.1 4.8e-05 23.6 0.3 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF26611 - 5.7e-07 29.2 3.1 5.7e-07 29.2 3.1 3.4 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF26611 - 4.8e-06 26.8 9.5 0.00013 22.2 0.5 2.2 1 1 1 2 2 2 2 C2H2-type zinc ribbon zf-met PF12874.7 ORF26611 - 0.00042 20.6 11.9 0.0065 16.8 0.8 3.4 3 1 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF26611 - 0.0011 19.2 9.6 0.015 15.7 0.7 2.9 1 1 2 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 ORF26611 - 0.0017 18.0 2.8 0.0075 16.0 0.2 2.4 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 ORF26611 - 0.008 16.2 14.9 0.12 12.4 2.7 3.0 3 1 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF26611 - 0.0087 16.3 1.9 0.0087 16.3 1.9 2.7 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding Rubredoxin PF00301.20 ORF26611 - 0.03 14.3 0.7 0.13 12.3 0.7 2.1 1 1 0 1 1 1 0 Rubredoxin CxC3 PF18804.1 ORF26611 - 0.047 13.5 0.5 0.12 12.2 0.5 1.7 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases Actin_micro PF17003.5 ORF26611 - 0.05 12.8 7.1 0.81 8.8 1.4 2.2 1 1 1 2 2 2 0 Putative actin-like family Mut7-C PF01927.16 ORF26611 - 0.063 13.4 4.3 0.05 13.7 2.5 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.10 ORF26611 - 0.094 12.8 6.4 0.49 10.6 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zinc_ribbon_15 PF17032.5 ORF26611 - 0.31 11.8 7.6 0.13 13.0 4.6 1.9 1 1 1 2 2 2 0 zinc-ribbon family DUF629 PF04780.12 ORF26611 - 0.53 8.7 5.7 0.34 9.4 0.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF629) PyrI_C PF02748.15 ORF26611 - 0.78 9.7 8.0 4.1 7.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-LYAR PF08790.11 ORF26611 - 0.83 9.6 6.4 0.6 10.1 0.3 3.1 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger zf-BED PF02892.15 ORF26611 - 2.7 8.1 13.7 7 6.8 1.8 2.8 1 1 1 2 2 2 0 BED zinc finger zf-AN1 PF01428.16 ORF26611 - 3.3 8.0 9.5 9.5 6.5 0.5 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger EF-hand_1 PF00036.32 ORF26268 - 4e-24 82.3 11.6 1.8e-06 27.1 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF26268 - 9.4e-21 74.0 5.0 1.1e-11 45.0 1.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF26268 - 1.1e-18 65.8 15.0 0.00023 20.5 0.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF26268 - 2.3e-18 64.5 6.9 1.1e-05 24.9 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF26268 - 1.6e-08 34.8 0.2 0.0042 17.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF26268 - 4.2e-07 29.7 11.0 0.018 14.9 2.8 4.4 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF26268 - 0.00035 20.5 4.8 1.1 9.3 1.1 3.7 1 1 3 4 4 4 3 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF26268 - 0.019 14.9 0.5 5.9 6.8 0.0 3.1 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF26268 - 0.026 14.7 5.0 12 6.1 4.4 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF26268 - 0.056 13.8 0.0 0.84 10.0 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain DUF1518 PF07469.12 ORF26183 - 0.3 11.5 2.6 0.65 10.4 2.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF1518) Ank_2 PF12796.7 ORF25973 - 1.6e-26 92.7 2.0 2e-13 50.7 0.7 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF25973 - 1.7e-20 73.1 3.3 4.1e-07 30.4 0.1 3.6 1 1 4 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF25973 - 1e-16 60.5 5.7 0.00068 20.0 0.1 5.0 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF25973 - 1.8e-13 49.3 1.7 0.059 13.9 0.0 5.0 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 ORF25973 - 4.3e-11 42.8 6.6 0.0063 16.8 0.4 4.8 1 1 4 5 5 5 3 Ankyrin repeats (many copies) VWA_3_C PF18571.1 ORF25973 - 0.0057 16.5 3.5 0.71 9.8 0.2 4.0 4 0 0 4 4 4 1 von Willebrand factor type A C-terminal domain NSs PF11073.8 ORF25973 - 0.0062 16.0 0.7 0.23 10.9 0.4 2.4 1 1 2 3 3 3 1 Rift valley fever virus non structural protein (NSs) like PTS_IIA PF02255.16 ORF25973 - 0.015 15.3 4.4 0.55 10.3 1.2 2.2 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit DUF3645 PF12359.8 ORF25973 - 0.17 11.3 0.0 2 7.9 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3645) Nse4-Nse3_bdg PF15412.6 ORF25973 - 0.79 9.9 4.8 4.9 7.3 0.0 3.3 4 0 0 4 4 4 0 Binding domain of Nse4/EID3 to Nse3-MAGE IPP-2 PF04979.14 ORF25594 - 2.2e-16 60.8 13.4 2.6e-16 60.6 13.4 1.1 1 0 0 1 1 1 1 Protein phosphatase inhibitor 2 (IPP-2) Ldt_C PF17969.1 ORF25594 - 0.029 15.1 0.7 0.12 13.2 0.4 2.1 1 1 1 2 2 2 0 L,D-transpeptidase C-terminal domain DUF3435 PF11917.8 ORF25594 - 0.47 9.3 5.3 0.58 9.0 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) bZIP_1 PF00170.21 ORF24548 - 4.2e-09 36.4 7.3 4.2e-09 36.4 7.3 1.6 1 1 1 2 2 2 2 bZIP transcription factor bZIP_2 PF07716.15 ORF24548 - 2.2e-06 27.7 7.6 6.6e-06 26.1 3.5 2.1 1 1 1 2 2 2 2 Basic region leucine zipper DUF1640 PF07798.11 ORF24548 - 0.003 17.6 3.7 0.0041 17.2 3.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) UPF0242 PF06785.11 ORF24548 - 0.0053 16.9 2.0 0.0066 16.6 2.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus KASH_CCD PF14662.6 ORF24548 - 0.014 15.2 9.8 0.048 13.5 4.4 2.0 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH WDCP PF15390.6 ORF24548 - 0.029 12.8 4.7 0.035 12.5 4.7 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Sec2p PF06428.11 ORF24548 - 0.039 13.9 3.3 0.039 13.9 3.3 1.4 1 1 0 1 1 1 0 GDP/GTP exchange factor Sec2p DivIC PF04977.15 ORF24548 - 0.1 12.4 0.9 0.19 11.5 0.6 1.6 1 1 0 1 1 1 0 Septum formation initiator GIT_CC PF16559.5 ORF24548 - 0.11 12.4 5.3 0.55 10.1 2.3 2.3 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor CLZ PF16526.5 ORF24548 - 0.85 10.0 8.0 3.3 8.1 2.5 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Globin PF00042.22 ORF24505 - 2e-12 47.6 0.0 2.8e-12 47.2 0.0 1.2 1 0 0 1 1 1 1 Globin DUF1472 PF07339.12 ORF22287 - 0.027 15.0 0.1 0.036 14.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1472) NUC173 PF08161.12 ORF22287 - 0.035 13.8 0.0 0.046 13.4 0.0 1.2 1 0 0 1 1 1 0 NUC173 domain K-box PF01486.17 ORF22287 - 0.063 13.5 1.3 0.097 12.9 1.3 1.3 1 0 0 1 1 1 0 K-box region EP400_N PF15790.5 ORF21438 - 0.23 10.3 0.1 0.28 10.0 0.1 1.1 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal DUF4845 PF16137.5 ORF19852 - 0.029 15.2 0.3 0.072 13.9 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4845) NUDIX PF00293.28 ORF19363 - 2.3e-09 37.4 0.1 3.4e-09 36.8 0.1 1.4 1 0 0 1 1 1 1 NUDIX domain zf-C2H2 PF00096.26 ORF19254 - 2.4e-18 65.5 16.0 1.6e-06 28.3 2.4 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF19254 - 2.3e-11 43.5 13.0 0.00038 21.1 1.4 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF19254 - 6.7e-10 38.9 13.0 4.8e-05 23.6 0.3 2.9 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF19254 - 5.7e-07 29.2 3.1 5.7e-07 29.2 3.1 3.5 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF19254 - 8.7e-05 22.8 7.6 0.00013 22.2 0.5 2.2 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF19254 - 0.0016 18.2 2.0 0.0075 16.0 0.2 2.4 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-met PF12874.7 ORF19254 - 0.0035 17.7 10.5 0.12 12.8 0.4 3.5 3 1 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF19254 - 0.022 15.1 0.8 0.022 15.1 0.8 2.8 1 1 2 3 3 3 0 C2H2 type zinc-finger (2 copies) Mut7-C PF01927.16 ORF19254 - 0.047 13.8 3.9 0.073 13.2 3.9 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain zinc_ribbon_15 PF17032.5 ORF19254 - 0.052 14.3 5.1 0.052 14.3 5.1 1.9 1 1 1 2 2 2 0 zinc-ribbon family Zn-ribbon_8 PF09723.10 ORF19254 - 0.11 12.7 6.3 0.63 10.2 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF19254 - 0.34 11.0 15.7 0.1 12.7 2.7 3.0 3 1 0 3 3 3 0 C2H2-type zinc finger HNH_5 PF14279.6 ORF19254 - 0.47 10.3 5.9 0.38 10.6 2.7 2.3 2 1 0 2 2 2 0 HNH endonuclease PyrI_C PF02748.15 ORF19254 - 0.51 10.3 7.4 4.1 7.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2H2_jaz PF12171.8 ORF19254 - 0.59 10.5 8.7 0.28 11.5 1.4 2.8 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-Di19 PF05605.12 ORF19254 - 1.1 9.6 5.5 0.85 10.0 3.2 2.0 2 1 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-AN1 PF01428.16 ORF19254 - 1.8 8.8 8.9 9.5 6.5 0.5 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger zf-C2HE PF16278.5 ORF19254 - 2.4 8.7 9.6 4.5 7.8 2.8 2.7 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger C1_4 PF07975.12 ORF19254 - 6.1 7.2 9.4 49 4.3 7.1 2.7 1 1 2 3 3 3 0 TFIIH C1-like domain HMG_CoA_synt_C PF08540.10 ORF18778 - 2.2e-38 132.5 3.2 2.4e-38 132.3 3.2 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_C PF08540.10 ORF18033 - 2.2e-38 132.5 3.2 2.4e-38 132.3 3.2 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal Acetyltransf_1 PF00583.25 ORF17682 - 6.1e-09 36.1 0.0 7.6e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF17682 - 1.2e-06 28.8 0.0 1.9e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF17682 - 0.0012 18.8 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF17682 - 0.007 16.4 0.0 0.03 14.4 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF1233 PF06806.12 ORF17682 - 0.1 12.2 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Putative excisionase (DUF1233) Acetyltransf_6 PF13480.7 ORF17682 - 0.16 12.1 0.0 0.26 11.4 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain NAD_binding_2 PF03446.15 ORF14024 - 2.8e-38 131.6 0.2 3.2e-38 131.4 0.2 1.0 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 ORF14024 - 6.7e-07 29.8 0.0 8.9e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 ORF14024 - 2.9e-06 26.8 0.0 3.5e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 ORF14024 - 5.8e-05 22.8 0.0 0.0033 17.0 0.0 2.1 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 ORF14024 - 6e-05 23.0 0.0 7.2e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 ORF14024 - 0.00062 20.0 0.0 0.00099 19.4 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain Shikimate_DH PF01488.20 ORF14024 - 0.0021 18.1 0.0 0.0028 17.7 0.0 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 ORF14024 - 0.0036 16.9 0.0 0.0044 16.6 0.0 1.1 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_C PF01262.21 ORF14024 - 0.0082 15.5 0.0 0.01 15.1 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain GFO_IDH_MocA PF01408.22 ORF14024 - 0.038 14.8 0.0 0.047 14.5 0.0 1.2 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_7 PF13241.6 ORF14024 - 0.05 14.0 0.0 0.076 13.5 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 ORF14024 - 0.058 13.7 0.0 0.089 13.1 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ADH_zinc_N PF00107.26 ORF14024 - 0.076 13.0 0.0 0.089 12.8 0.0 1.2 1 0 0 1 1 1 0 Zinc-binding dehydrogenase DUF364 PF04016.12 ORF14024 - 0.092 12.3 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Putative heavy-metal chelation ApbA PF02558.16 ORF14024 - 0.12 12.0 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA ELFV_dehydrog_N PF02812.18 ORF13021 - 0.15 12.0 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EF-hand_1 PF00036.32 ORF12082 - 4e-24 82.3 11.6 1.8e-06 27.1 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF12082 - 9.4e-21 74.0 5.0 1.1e-11 45.0 1.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF12082 - 1.1e-18 65.8 15.0 0.00023 20.5 0.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF12082 - 2.3e-18 64.5 6.9 1.1e-05 24.9 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF12082 - 1.6e-08 34.8 0.2 0.0042 17.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF12082 - 4.2e-07 29.7 11.0 0.018 14.9 2.8 4.4 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF12082 - 0.00035 20.5 4.8 1.1 9.3 1.1 3.7 1 1 3 4 4 4 3 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF12082 - 0.019 14.9 0.5 5.9 6.8 0.0 3.1 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF12082 - 0.026 14.7 5.0 12 6.1 4.4 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF12082 - 0.056 13.8 0.0 0.84 10.0 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain EF-hand_1 PF00036.32 ORF11506 - 4e-24 82.3 11.6 1.8e-06 27.1 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF11506 - 9.4e-21 74.0 5.0 1.1e-11 45.0 1.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF11506 - 1.1e-18 65.8 15.0 0.00023 20.5 0.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF11506 - 2.3e-18 64.5 6.9 1.1e-05 24.9 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF11506 - 1.6e-08 34.8 0.2 0.0042 17.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF11506 - 4.2e-07 29.7 11.0 0.018 14.9 2.8 4.4 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF11506 - 0.00035 20.5 4.8 1.1 9.3 1.1 3.7 1 1 3 4 4 4 3 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF11506 - 0.019 14.9 0.5 5.9 6.8 0.0 3.1 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF11506 - 0.026 14.7 5.0 12 6.1 4.4 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF11506 - 0.056 13.8 0.0 0.84 10.0 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain PH PF00169.29 ORF11462 - 2.5e-13 50.5 0.0 3e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF11462 - 0.001 19.5 0.4 0.0019 18.6 0.4 1.6 1 1 0 1 1 1 1 Pleckstrin homology domain PH_8 PF15409.6 ORF11462 - 0.012 15.9 0.1 0.058 13.7 0.1 2.0 1 1 0 1 1 1 0 Pleckstrin homology domain Csm1_B PF18211.1 ORF1143 - 0.027 14.3 0.4 0.15 11.9 0.1 2.0 2 0 0 2 2 2 0 Csm1 subunit domain B YqfQ PF14181.6 ORF1143 - 0.22 11.7 4.1 0.32 11.2 4.1 1.4 1 0 0 1 1 1 0 YqfQ-like protein DUF1640 PF07798.11 ORF1143 - 0.74 9.8 9.0 0.8 9.7 8.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) TFIIS_M PF07500.14 ORF112356 - 5.9e-10 39.6 0.0 8.3e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain DUF2087 PF09860.9 ORF111946 - 0.063 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) OrfB_IS605 PF01385.19 ORF111946 - 0.25 11.6 3.8 0.24 11.6 2.2 1.8 1 1 1 2 2 2 0 Probable transposase DUF1943 PF09172.11 ORF111883 - 0.019 14.2 3.0 0.022 14.0 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) AAA_32 PF13654.6 ORF111883 - 0.047 12.5 8.9 0.062 12.1 8.9 1.0 1 0 0 1 1 1 0 AAA domain KdpC PF02669.15 ORF111883 - 0.17 11.7 2.2 0.21 11.4 1.1 1.6 1 1 1 2 2 2 0 K+-transporting ATPase, c chain Duffy_binding PF05424.11 ORF111883 - 0.25 11.3 13.4 1.8 8.6 13.4 1.9 1 1 0 1 1 1 0 Duffy binding domain RE_Eco47II PF09553.10 ORF111883 - 1.1 8.8 11.4 1.4 8.5 6.4 2.0 1 1 1 2 2 2 0 Eco47II restriction endonuclease ERp29 PF07749.12 ORF111883 - 1.9 9.5 7.6 0.74 10.8 0.3 2.4 1 1 1 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain Snf7 PF03357.21 ORF111276 - 7.9e-14 51.6 11.1 9.4e-14 51.4 10.6 1.3 1 1 0 1 1 1 1 Snf7 GTP_cyclohydro2 PF00925.20 ORF111276 - 0.022 14.4 0.2 0.052 13.1 0.1 1.6 1 1 1 2 2 2 0 GTP cyclohydrolase II zf-C2H2 PF00096.26 ORF109885 - 1.4e-18 66.2 16.9 1.6e-06 28.3 2.4 3.5 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF109885 - 3.4e-12 46.1 13.9 0.00038 21.1 1.4 3.4 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF109885 - 3.9e-09 36.5 14.1 4.8e-05 23.6 0.3 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF109885 - 5.7e-07 29.2 3.1 5.7e-07 29.2 3.1 3.4 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF109885 - 4.7e-06 26.8 9.4 0.00013 22.2 0.4 2.2 1 1 1 2 2 2 2 C2H2-type zinc ribbon zf-C2H2_2 PF12756.7 ORF109885 - 0.00049 20.4 11.8 0.12 12.7 4.6 3.1 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-met PF12874.7 ORF109885 - 0.0041 17.5 16.9 0.0065 16.8 0.8 4.1 4 1 0 4 4 4 2 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF109885 - 0.0075 16.0 0.2 0.0075 16.0 0.2 2.6 3 0 0 3 3 3 1 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 ORF109885 - 0.0081 16.1 14.9 0.12 12.4 2.7 2.9 3 1 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF109885 - 0.0087 16.3 1.9 0.0087 16.3 1.9 3.5 3 0 0 3 3 3 1 Zinc-finger double-stranded RNA-binding Rubredoxin PF00301.20 ORF109885 - 0.031 14.3 0.7 0.13 12.3 0.7 2.0 1 1 0 1 1 1 0 Rubredoxin Mut7-C PF01927.16 ORF109885 - 0.048 13.8 3.9 0.058 13.5 2.8 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain CxC3 PF18804.1 ORF109885 - 0.055 13.3 0.5 0.12 12.2 0.5 1.6 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases AbiJ_NTD4 PF18863.1 ORF109885 - 0.061 13.8 1.6 0.087 13.3 1.6 1.2 1 0 0 1 1 1 0 AbiJ N-terminal domain 4 Actin_micro PF17003.5 ORF109885 - 0.12 11.6 8.3 0.76 8.9 1.2 2.3 1 1 1 2 2 2 0 Putative actin-like family Zn-ribbon_8 PF09723.10 ORF109885 - 0.12 12.5 6.4 0.49 10.6 0.2 2.8 3 0 0 3 3 2 0 Zinc ribbon domain zinc_ribbon_15 PF17032.5 ORF109885 - 0.27 12.0 7.1 0.21 12.4 5.1 1.8 1 1 0 1 1 1 0 zinc-ribbon family PyrI_C PF02748.15 ORF109885 - 0.76 9.7 8.0 4.1 7.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-LYAR PF08790.11 ORF109885 - 0.8 9.7 6.4 0.6 10.1 0.3 3.2 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger DUF629 PF04780.12 ORF109885 - 1.1 7.8 7.6 0.36 9.3 0.6 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF629) zf-BED PF02892.15 ORF109885 - 2.6 8.1 13.7 7 6.8 1.8 2.8 1 1 1 2 2 2 0 BED zinc finger zf-AN1 PF01428.16 ORF109885 - 3.4 7.9 9.5 9.5 6.5 0.5 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger zf-C2HE PF16278.5 ORF109885 - 7.4 7.1 9.3 4.8e+02 1.3 9.3 2.7 1 1 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger DUF4498 PF14926.6 ORF109881 - 6.8e-19 68.2 0.6 7.7e-19 68.0 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4498) Vpu PF00558.19 ORF109504 - 0.75 9.6 3.9 1.4 8.7 3.9 1.5 1 0 0 1 1 1 0 Vpu protein AAA_12 PF13087.6 ORF109053 - 1.3e-36 126.1 0.0 1.7e-36 125.8 0.0 1.0 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 ORF109053 - 0.034 14.0 0.1 0.088 12.6 0.1 1.8 1 1 0 1 1 1 0 UvrD-like helicase C-terminal domain DUF2197 PF09963.9 ORF108800 - 0.03 14.6 0.1 0.048 13.9 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) Gp-FAR-1 PF05823.12 ORF108148 - 0.012 15.9 0.1 0.026 14.9 0.1 1.6 2 0 0 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DUF4200 PF13863.6 ORF108148 - 0.054 13.9 0.9 0.087 13.2 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) CCDC32 PF14989.6 ORF108148 - 0.089 12.8 1.6 0.12 12.3 1.6 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing 32 EF-hand_1 PF00036.32 ORF107413 - 4e-24 82.3 11.6 1.8e-06 27.1 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF107413 - 9.4e-21 74.0 5.0 1.1e-11 45.0 1.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF107413 - 1.1e-18 65.8 15.0 0.00023 20.5 0.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF107413 - 2.3e-18 64.5 6.9 1.1e-05 24.9 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF107413 - 1.6e-08 34.8 0.2 0.0042 17.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF107413 - 4.2e-07 29.7 11.0 0.018 14.9 2.8 4.4 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF107413 - 0.00035 20.5 4.8 1.1 9.3 1.1 3.7 1 1 3 4 4 4 3 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF107413 - 0.019 14.9 0.5 5.9 6.8 0.0 3.1 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF107413 - 0.026 14.7 5.0 12 6.1 4.4 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF107413 - 0.056 13.8 0.0 0.84 10.0 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain Ank_4 PF13637.6 ORF106920 - 9.8e-08 32.4 0.3 1.6e-07 31.8 0.3 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF106920 - 4.1e-06 26.7 0.6 0.0058 17.0 0.1 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_2 PF12796.7 ORF106920 - 5.7e-05 23.6 0.1 8.6e-05 23.1 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF106920 - 0.029 14.7 0.1 0.049 14.0 0.1 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 ORF106920 - 0.13 12.7 0.4 11 6.7 0.1 2.4 2 0 0 2 2 2 0 Ankyrin repeat zf-C2H2 PF00096.26 ORF106649 - 2e-18 65.7 16.3 1.6e-06 28.3 2.4 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF106649 - 1.8e-11 43.9 13.7 0.00038 21.1 1.4 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF106649 - 5.4e-11 42.4 13.8 1e-05 25.7 3.1 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF106649 - 5.7e-07 29.2 3.1 5.7e-07 29.2 3.1 3.3 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF106649 - 2.7e-05 24.4 9.0 0.00013 22.2 0.5 2.2 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_jaz PF12171.8 ORF106649 - 0.00054 20.2 1.7 0.00054 20.2 1.7 2.8 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF106649 - 0.001 19.4 11.7 0.019 15.3 0.7 3.4 3 1 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF106649 - 0.0018 18.0 1.6 0.0075 16.0 0.2 2.3 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_2 PF12756.7 ORF106649 - 0.0018 18.6 9.1 0.026 14.9 0.9 2.9 1 1 2 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_6 PF13912.6 ORF106649 - 0.0025 17.8 15.9 0.047 13.7 1.2 3.0 3 1 0 3 3 3 2 C2H2-type zinc finger Mut7-C PF01927.16 ORF106649 - 0.068 13.3 4.5 0.11 12.6 4.5 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.10 ORF106649 - 0.098 12.8 7.3 0.33 11.1 0.4 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zf-Di19 PF05605.12 ORF106649 - 0.19 12.0 3.7 0.16 12.3 1.7 1.9 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zinc_ribbon_15 PF17032.5 ORF106649 - 0.38 11.5 8.8 0.18 12.6 5.9 1.9 1 1 1 2 2 2 0 zinc-ribbon family zf_ZIC PF18366.1 ORF106649 - 0.58 10.3 2.8 3.8 7.7 0.1 2.6 3 0 0 3 3 2 0 Zic proteins zinc finger domain HNH_5 PF14279.6 ORF106649 - 0.73 9.7 5.7 0.59 10.0 2.5 2.3 2 1 0 2 2 2 0 HNH endonuclease PyrI_C PF02748.15 ORF106649 - 0.98 9.4 8.1 4.1 7.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-AN1 PF01428.16 ORF106649 - 1.5 9.0 8.9 9.5 6.5 0.5 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger zf_UBZ PF18439.1 ORF106649 - 1.8 8.2 6.8 4.4 7.0 0.2 3.3 3 1 0 3 3 3 0 Ubiquitin-Binding Zinc Finger C1_2 PF03107.16 ORF106649 - 2.6 8.4 8.4 5.4 7.4 0.2 2.7 3 0 0 3 3 2 0 C1 domain TFIIS_C PF01096.18 ORF106649 - 2.9 7.8 9.5 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) C1_4 PF07975.12 ORF106649 - 3.7 7.8 10.0 31 4.9 7.8 2.7 1 1 2 3 3 3 0 TFIIH C1-like domain zf-C2HE PF16278.5 ORF106649 - 5.7 7.5 9.7 2.9 8.4 2.2 2.7 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger AsnC_trans_reg PF01037.21 ORF103963 - 5.1e-22 77.6 0.0 7.4e-22 77.1 0.0 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 ORF103963 - 1.1e-16 60.1 0.4 1.5e-16 59.6 0.4 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 ORF103963 - 1.1e-16 60.3 0.5 1.7e-16 59.7 0.5 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 ORF103963 - 0.00014 21.8 0.0 0.00021 21.1 0.0 1.2 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.6 ORF103963 - 0.032 14.2 0.0 0.058 13.4 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MarR PF01047.22 ORF103963 - 0.09 12.7 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 MarR family DDRGK PF09756.9 ORF103963 - 0.12 12.0 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 DDRGK domain Fiji_64_capsid PF05880.11 ORF103963 - 0.14 10.8 0.0 0.16 10.6 0.0 1.1 1 0 0 1 1 1 0 Fijivirus 64 kDa capsid protein NgoMIV_restric PF09015.10 ORF103449 - 0.039 13.1 0.2 0.047 12.8 0.2 1.2 1 0 0 1 1 1 0 NgoMIV restriction enzyme Csm1_B PF18211.1 ORF103295 - 0.019 14.8 1.2 0.2 11.5 0.1 2.2 1 1 1 2 2 2 0 Csm1 subunit domain B DUF4830 PF16112.5 ORF103295 - 0.094 13.2 0.8 0.16 12.5 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Polo_box_3 PF18544.1 ORF103295 - 1.3 9.7 6.4 0.25 12.0 0.9 2.2 1 1 2 3 3 3 0 Polo box domain DHC PF09626.10 ORF103295 - 1.5 9.7 4.4 1 10.2 1.3 1.9 1 1 1 2 2 2 0 Dihaem cytochrome c EF-hand_1 PF00036.32 ORF102550 - 4e-24 82.3 11.6 1.8e-06 27.1 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF102550 - 9.4e-21 74.0 5.0 1.1e-11 45.0 1.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF102550 - 1.1e-18 65.8 15.0 0.00023 20.5 0.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF102550 - 2.3e-18 64.5 6.9 1.1e-05 24.9 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF102550 - 1.6e-08 34.8 0.2 0.0042 17.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF102550 - 4.2e-07 29.7 11.0 0.018 14.9 2.8 4.4 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF102550 - 0.00035 20.5 4.8 1.1 9.3 1.1 3.7 1 1 3 4 4 4 3 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF102550 - 0.019 14.9 0.5 5.9 6.8 0.0 3.1 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF102550 - 0.026 14.7 5.0 12 6.1 4.4 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF102550 - 0.056 13.8 0.0 0.84 10.0 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain IPP-2 PF04979.14 ORF102394 - 2.2e-16 60.8 13.4 2.6e-16 60.6 13.4 1.1 1 0 0 1 1 1 1 Protein phosphatase inhibitor 2 (IPP-2) Ldt_C PF17969.1 ORF102394 - 0.029 15.1 0.7 0.12 13.2 0.4 2.1 1 1 1 2 2 2 0 L,D-transpeptidase C-terminal domain DUF3435 PF11917.8 ORF102394 - 0.47 9.3 5.3 0.58 9.0 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Ldh_2 PF02615.14 ORF102078 - 2.7e-18 66.2 0.0 3.1e-18 66.0 0.0 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase Penicillinase_R PF03965.16 ORF101732 - 0.023 15.1 0.0 0.035 14.5 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor DUF3431 PF11913.8 ORF100265 - 0.00057 19.7 0.0 0.00074 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3431) Chorion_1 PF01723.16 NODE_44159_length_451_cov_3.024038_g36442_i0reverse_frame_1 - 0.0042 17.1 2.0 0.0052 16.8 2.0 1.2 1 0 0 1 1 1 1 Chorion protein Lamprin PF06403.11 NODE_44159_length_451_cov_3.024038_g36442_i0reverse_frame_1 - 0.15 12.0 10.8 0.34 10.8 10.7 1.6 1 1 0 1 1 1 0 Lamprin Gb3_synth PF04572.12 NODE_44158_length_451_cov_3.033654_g36441_i0forward_frame_1 - 0.046 13.9 0.0 0.066 13.4 0.0 1.2 1 0 0 1 1 1 0 Alpha 1,4-glycosyltransferase conserved region DUF3915 PF13054.6 NODE_44148_length_451_cov_70.430288_g36431_i0reverse_frame_1 - 0.56 10.2 5.1 0.82 9.7 5.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Ribosomal_L22e PF01776.17 NODE_44145_length_451_cov_74.848558_g36428_i0reverse_frame_1 - 0.00024 21.5 1.7 0.00024 21.5 1.7 1.9 1 1 1 2 2 2 1 Ribosomal L22e protein family CD36 PF01130.21 NODE_44137_length_451_cov_96.079327_g36420_i0forward_frame_1 - 0.081 11.4 0.0 0.084 11.4 0.0 1.1 1 0 0 1 1 1 0 CD36 family DUF4754 PF15946.5 NODE_44135_length_451_cov_99.360577_g36418_i0forward_frame_1 - 0.13 12.5 0.2 0.22 11.8 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4754) Toxin_9 PF02819.15 NODE_44101_length_452_cov_2.160671_g36386_i0forward_frame_1 - 0.043 14.1 3.6 0.043 14.1 3.6 2.8 3 0 0 3 3 3 0 Spider toxin TMF_DNA_bd PF12329.8 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_1 - 0.023 14.7 1.9 0.05 13.6 1.9 1.6 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding NPV_P10 PF05531.12 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_1 - 0.023 15.1 0.3 0.045 14.2 0.3 1.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ApoO PF09769.9 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_1 - 0.027 14.5 0.4 0.048 13.6 0.4 1.4 1 0 0 1 1 1 0 Apolipoprotein O Gon7 PF08738.10 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_1 - 0.039 14.0 0.0 0.066 13.3 0.0 1.3 1 0 0 1 1 1 0 Gon7 family ALG11_N PF15924.5 NODE_44097_length_452_cov_2.347722_g36382_i0forward_frame_1 - 0.012 15.6 0.2 0.016 15.3 0.2 1.2 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus HTH_AraC PF00165.23 NODE_44095_length_452_cov_2.731415_g36380_i0reverse_frame_1 - 0.00012 22.1 0.0 0.037 14.1 0.0 3.0 3 0 0 3 3 3 2 Bacterial regulatory helix-turn-helix proteins, AraC family GAT PF03127.14 NODE_44089_length_452_cov_6.604317_g36374_i0reverse_frame_1 - 3.2e-14 53.0 2.0 3.7e-14 52.8 1.2 1.5 2 0 0 2 2 2 1 GAT domain BLOC1_2 PF10046.9 NODE_44086_length_452_cov_34.908873_g36371_i0forward_frame_1 - 0.23 11.8 0.0 0.38 11.1 0.0 1.3 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 EOS1 PF12326.8 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 0.33 10.9 2.5 0.35 10.8 2.5 1.2 1 0 0 1 1 1 0 N-glycosylation protein RR_TM4-6 PF06459.12 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 0.35 10.6 14.1 0.41 10.4 14.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 0.96 8.1 6.3 1 8.1 6.3 1.1 1 0 0 1 1 1 0 Presenilin YqfQ PF14181.6 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 1.3 9.2 13.2 1.6 8.9 13.2 1.3 1 0 0 1 1 1 0 YqfQ-like protein SpoIIP PF07454.11 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 1.3 8.4 13.8 1.7 8.1 13.8 1.1 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) DUF913 PF06025.12 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 1.8 7.5 5.1 1.9 7.4 5.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) RNA_pol_Rpc4 PF05132.14 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 1.9 8.9 16.8 2.9 8.3 16.8 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 PgaD PF13994.6 NODE_44085_length_452_cov_47.863309_g36370_i0forward_frame_1 - 0.038 14.1 0.5 0.038 14.1 0.5 2.4 2 1 0 2 2 2 0 PgaD-like protein OxoDH_E1alpha_N PF12573.8 NODE_44085_length_452_cov_47.863309_g36370_i0forward_frame_1 - 0.12 12.1 0.2 0.22 11.3 0.2 1.4 1 0 0 1 1 1 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal DUF2207 PF09972.9 NODE_44085_length_452_cov_47.863309_g36370_i0forward_frame_1 - 5.6 5.6 11.5 6.4 5.4 11.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ribosomal_60s PF00428.19 NODE_44084_length_452_cov_48.112710_g36369_i0reverse_frame_1 - 0.017 15.7 5.3 0.017 15.7 5.3 1.8 3 0 0 3 3 3 0 60s Acidic ribosomal protein ParD_antitoxin PF03693.14 NODE_44076_length_452_cov_67.223022_g36361_i0forward_frame_1 - 0.41 11.1 3.6 8.1 6.9 0.3 2.7 2 1 1 3 3 3 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH TRAF_BIRC3_bd PF16673.5 NODE_44076_length_452_cov_67.223022_g36361_i0forward_frame_1 - 0.97 9.3 10.4 5.1 7.0 1.0 3.3 2 1 0 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain PhosphMutase PF10143.9 NODE_44076_length_452_cov_67.223022_g36361_i0forward_frame_1 - 3.8 7.4 5.6 13 5.7 1.4 2.1 1 1 1 2 2 2 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DUF1664 PF07889.12 NODE_44076_length_452_cov_67.223022_g36361_i0forward_frame_1 - 5.7 7.0 11.7 6.9 6.7 1.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) CDH1_2_SANT_HL1 PF18375.1 NODE_44074_length_452_cov_80.323741_g36359_i0forward_frame_1 - 0.036 14.7 2.3 0.089 13.5 2.3 1.8 1 1 0 1 1 1 0 CDH1/2 SANT-Helical linker 1 EF-hand_like PF09279.11 NODE_44074_length_452_cov_80.323741_g36359_i0forward_frame_1 - 0.094 13.2 2.2 0.17 12.4 2.2 1.5 1 0 0 1 1 1 0 Phosphoinositide-specific phospholipase C, efhand-like AAA PF00004.29 NODE_44074_length_452_cov_80.323741_g36359_i0forward_frame_1 - 0.11 12.9 1.9 0.15 12.4 1.9 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF1640 PF07798.11 NODE_44074_length_452_cov_80.323741_g36359_i0forward_frame_1 - 0.19 11.8 8.9 0.23 11.5 8.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) GLE1 PF07817.13 NODE_44074_length_452_cov_80.323741_g36359_i0forward_frame_1 - 0.31 10.2 4.6 0.37 10.0 4.6 1.2 1 0 0 1 1 1 0 GLE1-like protein Z1 PF10593.9 NODE_44074_length_452_cov_80.323741_g36359_i0forward_frame_1 - 0.31 10.5 4.5 0.36 10.3 4.5 1.2 1 0 0 1 1 1 0 Z1 domain GDE_N PF12439.8 NODE_44072_length_452_cov_95.011990_g36357_i0forward_frame_1 - 0.17 11.3 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme N terminal SPT2 PF08243.11 NODE_44070_length_452_cov_102.347722_g36355_i0forward_frame_1 - 2.8e-17 63.3 9.8 3.6e-17 62.9 9.8 1.2 1 0 0 1 1 1 1 SPT2 chromatin protein HUN PF08729.10 NODE_44070_length_452_cov_102.347722_g36355_i0forward_frame_1 - 0.007 16.3 0.6 0.007 16.3 0.6 2.7 2 0 0 2 2 2 1 HPC2 and ubinuclein domain DUF4119 PF13494.6 NODE_44070_length_452_cov_102.347722_g36355_i0forward_frame_1 - 0.32 11.1 5.5 0.084 13.0 1.6 1.9 1 1 1 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF4119) DUF3810 PF12725.7 NODE_44064_length_452_cov_135.393285_g36349_i0forward_frame_1 - 0.087 12.2 3.5 0.11 11.8 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) CytochromB561_N PF09786.9 NODE_44064_length_452_cov_135.393285_g36349_i0forward_frame_1 - 0.33 9.9 4.1 0.4 9.6 4.1 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal GFD1 PF17331.2 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_1 - 0.31 11.3 0.1 42 4.5 0.0 2.2 2 0 0 2 2 2 0 GFD1 mRNA transport factor DUF5368 PF17336.2 NODE_44044_length_453_cov_1.856459_g36331_i0forward_frame_1 - 0.037 14.2 1.3 0.041 14.1 0.3 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5368) Peptidase_C2 PF00648.21 NODE_44040_length_453_cov_2.514354_g36327_i0reverse_frame_1 - 3.4e-34 118.2 0.0 3.7e-34 118.1 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease V_ATPase_I PF01496.19 NODE_44038_length_453_cov_2.614833_g36325_i0reverse_frame_1 - 3.5e-06 25.3 0.1 3.5e-06 25.3 0.1 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Swi5 PF07061.11 NODE_44024_length_453_cov_28.026316_g36311_i0reverse_frame_1 - 1.3 9.2 6.5 0.47 10.6 0.3 2.3 1 1 0 2 2 2 0 Swi5 FliL PF03748.14 NODE_44021_length_453_cov_43.205742_g36308_i0reverse_frame_1 - 0.017 15.7 3.1 0.022 15.3 2.9 1.4 1 1 0 1 1 1 0 Flagellar basal body-associated protein FliL DUF3492 PF11997.8 NODE_44021_length_453_cov_43.205742_g36308_i0reverse_frame_1 - 0.043 13.6 0.7 0.056 13.2 0.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3492) Ly49 PF08391.10 NODE_44021_length_453_cov_43.205742_g36308_i0reverse_frame_1 - 2.7 8.4 8.9 0.23 11.8 4.3 1.5 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region UnbV_ASPIC PF07593.12 NODE_44011_length_453_cov_77.600478_g36299_i0reverse_frame_1 - 0.083 12.9 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 ASPIC and UnbV RCC1_2 PF13540.6 NODE_43990_length_453_cov_117.755981_g36278_i0forward_frame_1 - 0.00028 20.6 2.6 0.14 12.0 0.4 2.6 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF5560 PF17715.1 NODE_43989_length_453_cov_120.071770_g36277_i0reverse_frame_1 - 0.072 12.5 0.0 0.073 12.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) Peptidase_S41 PF03572.18 NODE_43988_length_453_cov_132.114833_g36276_i0reverse_frame_1 - 8.1e-08 32.0 0.0 1.2e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S41 YqhG PF11079.8 NODE_43974_length_453_cov_416.947368_g36262_i0forward_frame_1 - 0.0027 16.7 0.1 0.0035 16.4 0.1 1.1 1 0 0 1 1 1 1 Bacterial protein YqhG of unknown function DSHCT PF08148.12 NODE_43974_length_453_cov_416.947368_g36262_i0forward_frame_1 - 0.026 14.2 0.1 0.034 13.8 0.1 1.2 1 0 0 1 1 1 0 DSHCT (NUC185) domain Virul_Fac PF10139.9 NODE_43974_length_453_cov_416.947368_g36262_i0forward_frame_1 - 0.043 12.1 0.1 0.051 11.8 0.1 1.0 1 0 0 1 1 1 0 Putative bacterial virulence factor UQ_con PF00179.26 NODE_43968_length_454_cov_1.568019_g36259_i0forward_frame_3 - 8.5e-35 119.4 0.0 9.5e-35 119.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 NODE_43968_length_454_cov_1.568019_g36259_i0forward_frame_3 - 0.02 15.2 0.0 0.02 15.2 0.0 1.2 1 0 0 1 1 1 0 RWD domain Laminin_G_3 PF13385.6 NODE_43967_length_454_cov_1.632458_g36258_i0reverse_frame_3 - 3e-19 69.7 0.9 3.6e-19 69.4 0.9 1.0 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Laminin_G_1 PF00054.23 NODE_43967_length_454_cov_1.632458_g36258_i0reverse_frame_3 - 0.00082 19.6 0.0 0.0012 19.1 0.0 1.2 1 0 0 1 1 1 1 Laminin G domain Laminin_G_2 PF02210.24 NODE_43967_length_454_cov_1.632458_g36258_i0reverse_frame_3 - 0.015 15.9 0.0 0.021 15.4 0.0 1.2 1 0 0 1 1 1 0 Laminin G domain DUF4183 PF13799.6 NODE_43967_length_454_cov_1.632458_g36258_i0reverse_frame_3 - 0.44 10.4 2.4 9.2 6.2 0.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4183) T2SSE_N PF05157.15 NODE_43964_length_454_cov_2.100239_g36255_i0forward_frame_2 - 0.09 13.0 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein E, N-terminal domain Intg_mem_TP0381 PF09529.10 NODE_43963_length_454_cov_2.155131_g36254_i0forward_frame_2 - 0.012 15.1 1.9 0.014 14.9 1.9 1.1 1 0 0 1 1 1 0 Integral membrane protein (intg_mem_TP0381) MgtC PF02308.16 NODE_43963_length_454_cov_2.155131_g36254_i0forward_frame_2 - 0.019 15.3 0.2 0.031 14.7 0.2 1.3 1 1 0 1 1 1 0 MgtC family DUF996 PF06195.13 NODE_43963_length_454_cov_2.155131_g36254_i0forward_frame_2 - 0.039 14.2 5.2 0.054 13.8 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF996) FecCD PF01032.18 NODE_43963_length_454_cov_2.155131_g36254_i0forward_frame_2 - 0.043 12.8 5.9 0.077 12.0 5.9 1.4 1 1 0 1 1 1 0 FecCD transport family PHO4 PF01384.20 NODE_43963_length_454_cov_2.155131_g36254_i0forward_frame_2 - 0.13 11.3 3.6 0.12 11.4 2.4 1.6 1 1 1 2 2 2 0 Phosphate transporter family Caud_tail_N PF16838.5 NODE_43961_length_454_cov_2.322196_g36252_i0reverse_frame_3 - 0.055 13.9 1.1 0.055 13.9 1.1 2.1 1 1 1 2 2 2 0 Caudoviral major tail protein N-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks146.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks146.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks146.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks146.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Sulfotransfer_1 PF00685.27 NODE_43948_length_454_cov_3.758950_g36239_i0forward_frame_3 - 0.095 12.2 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Sulfotransferase domain Gemini_mov PF01708.16 NODE_43944_length_454_cov_39.250597_g36235_i0reverse_frame_2 - 0.22 11.3 0.5 0.47 10.2 0.5 1.5 1 0 0 1 1 1 0 Geminivirus putative movement protein Pkinase PF00069.25 NODE_43943_length_454_cov_41.023866_g36234_i0reverse_frame_2 - 5.6e-24 84.9 0.0 7e-24 84.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_43943_length_454_cov_41.023866_g36234_i0reverse_frame_2 - 1.3e-05 24.6 0.0 1.7e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase CCP_MauG PF03150.14 NODE_43943_length_454_cov_41.023866_g36234_i0forward_frame_3 - 0.11 13.1 0.5 0.13 12.9 0.5 1.2 1 0 0 1 1 1 0 Di-haem cytochrome c peroxidase zf-C2H2 PF00096.26 NODE_43939_length_454_cov_60.799523_g36230_i0forward_frame_2 - 0.63 10.6 0.1 0.63 10.6 0.1 2.5 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_43939_length_454_cov_60.799523_g36230_i0forward_frame_2 - 0.82 10.7 0.1 0.82 10.7 0.1 2.9 3 0 0 3 3 3 0 C2H2-type zinc finger Y_phosphatase2 PF03162.13 NODE_43932_length_454_cov_87.715990_g36223_i0reverse_frame_2 - 0.011 15.3 0.1 0.015 14.9 0.1 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family DsbD PF02683.15 NODE_43925_length_454_cov_134.262530_g36216_i0forward_frame_2 - 0.034 14.0 0.0 0.04 13.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region Gypsy PF07253.11 NODE_43921_length_454_cov_138.391408_g36212_i0reverse_frame_3 - 0.012 14.2 0.1 0.013 14.1 0.1 1.1 1 0 0 1 1 1 0 Gypsy protein DUF1935 PF09149.10 NODE_43918_length_454_cov_161.627685_g36209_i0reverse_frame_2 - 0.068 13.6 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1935) PP-binding PF00550.25 NODE_43915_length_454_cov_241.873508_g36206_i0forward_frame_2 - 7.8e-07 29.4 0.1 1.2e-06 28.8 0.1 1.4 1 0 0 1 1 1 1 Phosphopantetheine attachment site DUF2269 PF10027.9 NODE_43914_length_454_cov_270.054893_g36205_i0reverse_frame_3 - 0.068 13.2 1.4 0.42 10.7 0.1 2.0 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2269) DUF3138 PF11336.8 NODE_43914_length_454_cov_270.054893_g36205_i0reverse_frame_3 - 0.2 10.3 10.3 0.21 10.1 10.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) SelR PF01641.18 NODE_43910_length_454_cov_445.291169_g34278_i1reverse_frame_2 - 6.2e-20 71.5 0.1 8.1e-20 71.1 0.1 1.2 1 0 0 1 1 1 1 SelR domain HNH_5 PF14279.6 NODE_43909_length_454_cov_496.930788_g36201_i0forward_frame_3 - 0.12 12.3 0.1 0.25 11.2 0.1 1.5 1 0 0 1 1 1 0 HNH endonuclease Zn_Tnp_IS1 PF03811.13 NODE_43909_length_454_cov_496.930788_g36201_i0forward_frame_3 - 0.16 11.8 3.2 6.2 6.6 1.0 2.6 2 0 0 2 2 2 0 InsA N-terminal domain Ribosomal_S13 PF00416.22 NODE_43909_length_454_cov_496.930788_g36201_i0forward_frame_2 - 0.042 14.2 2.3 0.067 13.6 2.3 1.3 1 0 0 1 1 1 0 Ribosomal protein S13/S18 adh_short PF00106.25 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 1.7e-10 40.7 0.1 2.2e-10 40.4 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 1.4e-05 24.8 0.1 1.9e-05 24.3 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase UDPG_MGDP_dh_N PF03721.14 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.00016 21.3 0.2 0.0002 21.0 0.2 1.1 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KR PF08659.10 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.00079 19.4 0.0 0.0011 19.0 0.0 1.2 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.0036 16.9 0.0 0.0051 16.5 0.0 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.007 16.2 0.0 0.0088 15.8 0.0 1.1 1 0 0 1 1 1 1 N-terminus of Esterase_SGNH_hydro-type ThiF PF00899.21 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.0099 15.3 0.1 2.4 7.5 0.0 2.1 1 1 1 2 2 2 2 ThiF family Sacchrp_dh_NADP PF03435.18 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.04 14.2 0.0 0.057 13.7 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_Gly3P_dh_N PF01210.23 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.045 13.7 0.0 0.055 13.4 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Polysacc_synt_2 PF02719.15 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.049 12.8 0.1 0.058 12.5 0.1 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein LytR_C PF13399.6 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.074 14.0 0.0 0.098 13.7 0.0 1.2 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator 3HCDH_N PF02737.18 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.076 12.9 0.1 0.13 12.2 0.1 1.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MPS-4 PF17523.2 NODE_43905_length_454_cov_1150.389021_g36197_i0forward_frame_3 - 0.31 11.2 3.8 0.6 10.3 3.8 1.5 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DXP_redisom_C PF08436.12 NODE_43900_length_454_cov_28391.071599_g36193_i0forward_frame_3 - 0.12 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DUF2713 PF10897.8 NODE_43898_length_455_cov_1.976190_g36191_i0reverse_frame_2 - 1.4e-85 286.7 3.1 1.6e-85 286.5 3.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2713) DUF2633 PF11119.8 NODE_43887_length_455_cov_3.354762_g36180_i0forward_frame_3 - 0.00036 20.4 0.7 0.00036 20.4 0.7 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2633) PTS_2-RNA PF01885.16 NODE_43885_length_455_cov_3.502381_g36178_i0reverse_frame_3 - 3.2e-07 30.6 0.0 4.3e-07 30.2 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family DUF2688 PF10892.8 NODE_43884_length_455_cov_3.564286_g36177_i0reverse_frame_2 - 0.064 12.7 0.0 0.097 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) Mif2_N PF15624.6 NODE_43884_length_455_cov_3.564286_g36177_i0forward_frame_3 - 0.85 10.3 6.3 3.6 8.3 6.3 1.8 1 1 0 1 1 1 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal CAS_C PF12026.8 NODE_43883_length_455_cov_3.635714_g36176_i0reverse_frame_2 - 0.031 14.3 1.1 0.04 14.0 1.1 1.1 1 0 0 1 1 1 0 Crk-Associated Substrate C-terminal domain MTH865 PF07747.11 NODE_43879_length_455_cov_43.530952_g36172_i0forward_frame_3 - 0.2 11.5 0.0 0.32 10.8 0.0 1.3 1 0 0 1 1 1 0 MTH865-like family RRM_1 PF00076.22 NODE_43878_length_455_cov_43.783333_g36171_i0reverse_frame_3 - 1.2e-08 34.6 0.0 3.7e-08 33.1 0.0 1.7 1 1 1 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF1980 PF09323.10 NODE_43878_length_455_cov_43.783333_g36171_i0forward_frame_2 - 0.49 10.3 4.9 0.57 10.1 4.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF2614 PF11023.8 NODE_43876_length_455_cov_55.342857_g36169_i0reverse_frame_2 - 0.11 12.5 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Zinc-ribbon containing domain RCC1_2 PF13540.6 NODE_43873_length_455_cov_66.452381_g36166_i0reverse_frame_2 - 2e-07 30.6 2.0 0.015 15.1 0.0 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PIR PF00399.19 NODE_43873_length_455_cov_66.452381_g36166_i0reverse_frame_2 - 4.7 6.9 12.6 23 4.7 0.3 3.6 3 0 0 3 3 3 0 Yeast PIR protein repeat RP854 PF17460.2 NODE_43871_length_455_cov_79.466667_g36164_i0forward_frame_3 - 0.0065 16.2 1.2 0.0078 16.0 1.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein RP854 Scm3 PF10384.9 NODE_43866_length_455_cov_109.009524_g36159_i0reverse_frame_2 - 0.094 12.5 2.6 0.17 11.7 0.8 2.3 2 0 0 2 2 2 0 Centromere protein Scm3 EST1 PF10374.9 NODE_43866_length_455_cov_109.009524_g36159_i0reverse_frame_2 - 0.14 12.8 4.2 0.14 12.8 3.3 1.4 1 1 0 1 1 1 0 Telomerase activating protein Est1 Spore_III_AB PF09548.10 NODE_43866_length_455_cov_109.009524_g36159_i0reverse_frame_2 - 2.6 8.1 6.4 0.31 11.1 2.3 1.7 2 1 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) Polysacc_synt PF01943.17 NODE_43858_length_455_cov_185.566667_g36151_i0reverse_frame_3 - 0.011 15.2 1.3 0.014 14.8 1.3 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Glyco_hydro_30C PF17189.4 NODE_43852_length_455_cov_266.264286_g36145_i0forward_frame_2 - 3.5e-15 56.0 0.0 4.9e-15 55.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 beta sandwich domain Glyco_hydro_30 PF02055.16 NODE_43852_length_455_cov_266.264286_g36145_i0forward_frame_2 - 0.0006 18.9 0.0 0.00081 18.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 TIM-barrel domain Xan_ur_permease PF00860.20 NODE_43850_length_455_cov_438.826190_g36143_i0reverse_frame_3 - 0.013 14.2 0.3 0.018 13.7 0.3 1.1 1 0 0 1 1 1 0 Permease family RPS31 PF17067.5 NODE_43843_length_456_cov_1.700713_g36138_i0forward_frame_2 - 0.04 14.1 0.5 0.04 14.1 0.5 2.2 1 1 2 3 3 3 0 Ribosomal protein S31e PsiB PF06290.11 NODE_43842_length_456_cov_1.722090_g36137_i0reverse_frame_2 - 0.17 11.3 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) Acyl_transf_3 PF01757.22 NODE_43842_length_456_cov_1.722090_g36137_i0forward_frame_3 - 3e-14 52.8 11.0 3.8e-14 52.5 11.0 1.1 1 0 0 1 1 1 1 Acyltransferase family DUF1624 PF07786.12 NODE_43842_length_456_cov_1.722090_g36137_i0forward_frame_3 - 7.9e-05 22.3 3.7 9.6e-05 22.0 3.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) DUF4199 PF13858.6 NODE_43842_length_456_cov_1.722090_g36137_i0forward_frame_3 - 1.2 9.5 11.5 5.4 7.4 11.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) PrkA PF06798.12 NODE_43836_length_456_cov_2.629454_g36131_i0forward_frame_2 - 5.8e-39 134.3 0.7 6.4e-39 134.1 0.7 1.0 1 0 0 1 1 1 1 PrkA serine protein kinase C-terminal domain Med31 PF05669.12 NODE_43836_length_456_cov_2.629454_g36131_i0forward_frame_2 - 0.045 13.8 7.3 0.073 13.1 1.7 2.3 1 1 1 2 2 2 0 SOH1 DUF1358 PF07096.11 NODE_43832_length_456_cov_3.292162_g36127_i0reverse_frame_2 - 0.062 13.3 0.0 3.6 7.6 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1358) Alpha_adaptin_C PF02296.16 NODE_43832_length_456_cov_3.292162_g36127_i0forward_frame_2 - 0.11 12.7 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain PUF PF00806.19 NODE_43830_length_456_cov_3.510689_g36125_i0reverse_frame_3 - 1.8e-17 62.0 2.7 9.2e-05 21.9 0.0 3.7 3 1 0 3 3 3 3 Pumilio-family RNA binding repeat DUF3465 PF11948.8 NODE_43830_length_456_cov_3.510689_g36125_i0reverse_frame_3 - 0.031 14.1 0.5 0.67 9.8 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3465) sCache_2 PF17200.4 NODE_43830_length_456_cov_3.510689_g36125_i0reverse_frame_3 - 0.062 13.1 0.1 59 3.5 0.0 3.1 1 1 1 3 3 3 0 Single Cache domain 2 RGS PF00615.19 NODE_43830_length_456_cov_3.510689_g36125_i0reverse_frame_3 - 0.87 9.9 5.9 13 6.1 0.1 3.2 2 1 1 3 3 3 0 Regulator of G protein signaling domain UPF0149 PF03695.13 NODE_43829_length_456_cov_3.824228_g36124_i0reverse_frame_3 - 6.6e-29 101.4 1.8 7.5e-29 101.2 1.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0149) F_bP_aldolase PF01116.20 NODE_43828_length_456_cov_3.980998_g36123_i0forward_frame_2 - 3.4e-39 135.0 0.1 3.8e-39 134.9 0.1 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II MR_MLE_C PF13378.6 NODE_43828_length_456_cov_3.980998_g36123_i0forward_frame_2 - 0.044 13.3 0.7 0.063 12.8 0.5 1.5 1 1 0 1 1 1 0 Enolase C-terminal domain-like DUF1381 PF07129.11 NODE_43827_length_456_cov_4.109264_g36122_i0forward_frame_2 - 0.098 12.5 0.2 0.21 11.5 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) HlyIII PF03006.20 NODE_43826_length_456_cov_27.985748_g36121_i0reverse_frame_3 - 5.6e-24 85.1 2.4 6.8e-24 84.8 2.4 1.1 1 0 0 1 1 1 1 Haemolysin-III related PARM PF17061.5 NODE_43817_length_456_cov_74.878860_g36112_i0reverse_frame_2 - 0.037 14.2 2.4 0.038 14.1 2.4 1.1 1 0 0 1 1 1 0 PARM DUF563 PF04577.14 NODE_43817_length_456_cov_74.878860_g36112_i0forward_frame_2 - 1.3e-07 31.9 0.0 1.8e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF563) Uroplakin_II PF07353.12 NODE_43817_length_456_cov_74.878860_g36112_i0forward_frame_2 - 0.096 12.2 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Uroplakin II His_Phos_1 PF00300.22 NODE_43809_length_456_cov_89.997625_g36104_i0forward_frame_2 - 0.014 15.1 0.0 0.017 14.8 0.0 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 1) MORN_2 PF07661.13 NODE_43808_length_456_cov_92.821853_g36103_i0forward_frame_3 - 0.73 10.3 9.6 6 7.4 0.1 4.0 3 0 0 3 3 3 0 MORN repeat variant Dynein_light PF01221.18 NODE_43804_length_456_cov_97.627078_g36099_i0reverse_frame_3 - 5.5e-21 74.7 1.3 8.6e-21 74.1 1.0 1.5 1 1 0 1 1 1 1 Dynein light chain type 1 APOBEC_N PF08210.11 NODE_43804_length_456_cov_97.627078_g36099_i0forward_frame_3 - 0.099 12.5 0.4 0.13 12.2 0.4 1.1 1 0 0 1 1 1 0 APOBEC-like N-terminal domain CD36 PF01130.21 NODE_43803_length_456_cov_98.277910_g36098_i0reverse_frame_3 - 0.2 10.1 0.7 0.26 9.8 0.7 1.1 1 0 0 1 1 1 0 CD36 family SH PF01445.17 NODE_43801_length_456_cov_100.273159_g36096_i0reverse_frame_3 - 4.5 7.3 7.5 0.44 10.5 2.7 1.8 2 0 0 2 2 2 0 Viral small hydrophobic protein Arm_3 PF16186.5 NODE_43801_length_456_cov_100.273159_g36096_i0reverse_frame_2 - 1.8 8.2 4.0 0.43 10.2 0.7 1.6 2 0 0 2 2 2 0 Atypical Arm repeat Rrn6 PF10214.9 NODE_43795_length_456_cov_164.985748_g36091_i0forward_frame_2 - 0.94 7.9 4.6 0.94 7.9 4.6 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor AvrL567-A PF11529.8 NODE_43787_length_456_cov_249.686461_g36083_i0forward_frame_2 - 0.067 13.4 0.1 0.22 11.7 0.1 1.8 1 1 0 1 1 1 0 Melampsora lini avirulence protein AvrL567-A Herpes_U59 PF04529.12 NODE_43781_length_456_cov_604.928741_g36078_i0reverse_frame_3 - 0.031 13.3 0.2 0.039 13.0 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein Herpes_U59 PF04529.12 NODE_43777_length_456_cov_815.026128_g36074_i0reverse_frame_3 - 0.032 13.3 0.2 0.039 13.0 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein DUF979 PF06166.12 NODE_43777_length_456_cov_815.026128_g36074_i0forward_frame_3 - 0.0023 17.2 0.1 0.0023 17.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF979) PgaD PF13994.6 NODE_43773_length_456_cov_6292.118765_g36071_i0forward_frame_3 - 5.3 7.1 8.9 0.87 9.6 0.1 2.5 2 1 1 3 3 3 0 PgaD-like protein zf-dskA_traR PF01258.17 ORF99810 - 1.7e-10 40.7 3.3 2.6e-10 40.1 3.3 1.3 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger DZR PF12773.7 ORF99810 - 0.068 13.2 0.2 0.12 12.4 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon FAM165 PF14981.6 ORF99810 - 0.14 12.0 0.5 3.9 7.4 0.0 2.4 2 0 0 2 2 2 0 FAM165 family MFS_1 PF07690.16 ORF99797 - 7.2e-05 21.9 0.0 7.3e-05 21.9 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PTR2 PF00854.21 ORF99797 - 0.0057 15.5 0.6 0.0072 15.2 0.6 1.1 1 0 0 1 1 1 1 POT family MFS_4 PF06779.14 ORF99797 - 0.12 11.7 0.2 0.14 11.4 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB CSD PF00313.22 ORF9678 - 3e-12 46.2 0.2 3.4e-06 26.8 0.0 2.7 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF9678 - 0.019 14.6 0.0 0.049 13.3 0.0 1.6 1 0 0 1 1 1 0 Ribonuclease B OB domain DFRP_C PF16543.5 ORF96527 - 0.049 14.1 4.9 0.27 11.8 1.1 2.2 2 0 0 2 2 2 0 DRG Family Regulatory Proteins, Tma46 Asp PF00026.23 ORF9608 - 3.6e-13 49.6 0.1 4.1e-13 49.4 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF412 PF04217.13 ORF95125 - 3.8e-57 192.1 0.2 4.3e-57 192.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF412 DHHC PF01529.20 ORF95040 - 0.0015 18.6 8.0 0.0023 18.1 8.0 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase EamA PF00892.20 ORF95040 - 0.0083 16.3 3.3 0.012 15.8 3.3 1.2 1 0 0 1 1 1 1 EamA-like transporter family AdoMet_dc PF02675.15 ORF92029 - 0.042 14.1 0.1 0.12 12.7 0.0 1.8 2 0 0 2 2 2 0 S-adenosylmethionine decarboxylase DEAD PF00270.29 ORF90033 - 8.2e-21 74.6 0.0 1.1e-20 74.2 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase CMS1 PF14617.6 ORF90033 - 0.0014 18.0 0.0 0.0017 17.8 0.0 1.1 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit NDK PF00334.19 ORF90033 - 0.01 15.9 0.1 0.63 10.1 0.0 2.1 2 0 0 2 2 2 0 Nucleoside diphosphate kinase DUF717 PF05338.12 ORF90033 - 0.013 15.6 0.0 4.3 7.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF717) AAA_22 PF13401.6 ORF90033 - 0.12 12.7 0.0 0.19 12.0 0.0 1.4 1 1 0 1 1 1 0 AAA domain PPR_3 PF13812.6 ORF89638 - 3.7e-05 23.7 0.1 0.00017 21.6 0.0 2.0 1 1 1 2 2 2 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF89638 - 0.0087 16.2 0.1 0.025 14.8 0.1 1.8 1 1 1 2 2 2 1 PPR repeat family PPR_long PF17177.4 ORF89638 - 0.01 15.2 0.0 0.02 14.3 0.0 1.4 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP Rav1p_C PF12234.8 ORF88174 - 0.031 12.7 3.6 0.032 12.6 3.6 1.2 1 0 0 1 1 1 0 RAVE protein 1 C terminal Minor_tail_Z PF06763.11 ORF88174 - 0.1 12.4 3.0 0.13 12.0 3.0 1.1 1 0 0 1 1 1 0 Prophage minor tail protein Z (GPZ) ArAE_2_N PF10337.9 ORF88174 - 0.13 11.3 1.2 0.12 11.4 1.2 1.2 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal RadC PF04002.15 ORF86841 - 0.022 14.7 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 RadC-like JAB domain Snf7 PF03357.21 ORF84229 - 3.4e-21 75.6 6.7 3.9e-21 75.4 6.7 1.0 1 0 0 1 1 1 1 Snf7 Enkurin PF13864.6 ORF84229 - 0.99 9.9 4.7 0.34 11.4 0.6 2.2 2 1 0 2 2 2 0 Calmodulin-binding Asp PF00026.23 ORF83967 - 1e-18 67.9 0.1 1.1e-18 67.7 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Mito_carr PF00153.27 ORF83436 - 2.8e-19 68.8 0.4 2.3e-12 46.6 0.0 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein Methyltransf_11 PF08241.12 ORF81755 - 4.3e-10 40.1 0.0 6.9e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF81755 - 2.5e-06 28.2 0.0 3.7e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF81755 - 4e-06 27.5 0.0 6.5e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF81755 - 6e-06 26.0 0.0 7e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Ubie_methyltran PF01209.18 ORF81755 - 4.3e-05 23.0 0.0 9.2e-05 21.9 0.0 1.5 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF81755 - 0.0001 22.2 0.0 0.00013 21.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF81755 - 0.00012 22.0 0.0 0.00013 21.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_29 PF03141.16 ORF81755 - 0.0037 15.9 0.0 0.0045 15.6 0.0 1.0 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase N6_N4_Mtase PF01555.18 ORF81755 - 0.012 15.3 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 DNA methylase Methyltransf_8 PF05148.15 ORF81755 - 0.028 14.3 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 Hypothetical methyltransferase cNMP_binding PF00027.29 ORF8142 - 2e-15 56.6 0.2 1.5e-08 34.6 0.1 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain DNA_pol3_a_NII PF11490.8 ORF8142 - 0.021 14.7 1.7 0.91 9.4 0.4 2.1 1 1 1 2 2 2 0 DNA polymerase III polC-type N-terminus II VWC PF00093.18 ORF80739 - 0.016 15.5 17.1 0.063 13.6 3.8 2.2 2 0 0 2 2 2 0 von Willebrand factor type C domain U-box PF04564.15 ORF80402 - 8.1e-24 83.6 0.1 1.3e-23 82.9 0.1 1.3 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 ORF80402 - 7.3e-06 25.7 0.1 4.6e-05 23.2 0.1 2.0 1 1 1 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 ORF80402 - 2.4e-05 24.2 0.0 4.1e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-NOSIP PF15906.5 ORF80402 - 0.0015 18.6 0.0 0.0028 17.7 0.0 1.5 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein DUF4064 PF13273.6 ORF80402 - 0.045 14.0 0.0 0.06 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) T3SS_NleG PF06416.12 ORF80402 - 0.11 12.4 0.2 0.54 10.2 0.1 1.9 1 1 0 1 1 1 0 Effector protein NleG zf-C3HC4_4 PF15227.6 ORF80402 - 0.2 11.9 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 ORF80402 - 0.2 11.5 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) ASC PF00858.24 ORF77967 - 0.0099 14.9 0.2 0.011 14.7 0.2 1.1 1 0 0 1 1 1 1 Amiloride-sensitive sodium channel Asp PF00026.23 ORF77800 - 3.4e-16 59.5 0.1 3.6e-16 59.5 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 ORF77800 - 0.0012 19.4 0.0 0.003 18.2 0.0 1.7 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 ORF77800 - 0.062 13.9 0.0 0.19 12.3 0.0 1.8 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Ala_racemase_N PF01168.20 ORF77681 - 2e-18 66.9 0.0 2.4e-18 66.6 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain MT PF12777.7 ORF77663 - 5.4e-12 45.4 0.0 6.8e-12 45.1 0.0 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Rap1a PF18602.1 ORF77263 - 0.17 12.2 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 Rap1a immunity proteins adh_short PF00106.25 ORF76264 - 2.1e-13 50.2 0.0 2.5e-13 49.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF76264 - 0.00017 21.2 0.0 0.00023 20.8 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase 3HCDH_N PF02737.18 ORF76264 - 0.011 15.6 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF76264 - 0.028 14.4 0.0 0.036 14.1 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 ORF76264 - 0.055 13.0 0.0 0.068 12.7 0.0 1.1 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Cpn60_TCP1 PF00118.24 ORF75899 - 9.2e-48 163.1 0.0 1e-47 162.9 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Thioredoxin PF00085.20 ORF75097 - 8.2e-05 22.5 0.3 0.00033 20.6 0.0 2.0 2 1 0 2 2 2 1 Thioredoxin Ntox28 PF15605.6 ORF75097 - 0.007 16.6 2.0 0.22 11.8 1.2 2.3 2 0 0 2 2 2 1 Bacterial toxin 28 eIF3_N PF09440.10 ORF75097 - 0.032 14.7 7.4 0.045 14.2 7.4 1.2 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain AcylCoA_dehyd_C PF12186.8 ORF75097 - 0.11 12.6 7.8 0.07 13.3 5.0 1.9 1 1 1 2 2 2 0 Acyl-CoA dehydrogenase C terminal DUF2937 PF11157.8 ORF75097 - 0.13 11.9 2.4 0.18 11.5 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) Cdh1_DBD_1 PF18196.1 ORF75097 - 0.18 12.1 10.5 0.27 11.5 10.5 1.3 1 0 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 YlqD PF11068.8 ORF75097 - 0.21 11.9 9.5 0.3 11.4 9.5 1.1 1 0 0 1 1 1 0 YlqD protein TMPIT PF07851.13 ORF75097 - 2.1 7.5 5.7 2.7 7.2 5.7 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF3987 PF13148.6 ORF75097 - 4.6 6.1 9.8 6.3 5.7 9.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) CREPT PF16566.5 ORF75097 - 6.4 6.9 12.4 10 6.3 12.1 1.4 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour Cyt-b5 PF00173.28 ORF74748 - 7.4e-07 29.2 0.1 1.1e-06 28.6 0.1 1.4 1 1 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain adh_short PF00106.25 ORF74395 - 1.2e-23 83.6 0.0 1.6e-23 83.2 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF74395 - 5.3e-14 52.3 0.0 6.5e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF74395 - 0.0024 17.8 0.0 0.0045 16.9 0.0 1.5 1 1 0 1 1 1 1 KR domain Strumpellin PF10266.9 ORF73823 - 2e-10 39.1 0.1 2.3e-10 38.9 0.1 1.2 1 1 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin Vfa1 PF08432.10 ORF73823 - 0.00061 20.2 3.3 0.00068 20.0 3.3 1.1 1 0 0 1 1 1 1 AAA-ATPase Vps4-associated protein 1 DUF2722 PF10846.8 ORF73823 - 0.53 9.2 3.5 0.66 8.8 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) Asp PF00026.23 ORF72007 - 3.4e-16 59.5 0.1 3.6e-16 59.5 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 ORF72007 - 0.0012 19.4 0.0 0.003 18.2 0.0 1.7 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 ORF72007 - 0.062 13.9 0.0 0.19 12.3 0.0 1.8 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Lipoprotein_18 PF06804.11 ORF71729 - 1.1e-55 188.9 0.2 1.3e-55 188.8 0.2 1.0 1 0 0 1 1 1 1 NlpB/DapX lipoprotein Adeno_E4_34 PF04528.13 ORF71180 - 0.054 13.3 0.1 0.067 13.0 0.1 1.2 1 0 0 1 1 1 0 Adenovirus early E4 34 kDa protein conserved region FGF-BP1 PF06473.12 ORF70372 - 5.8 6.7 9.5 7.7 6.3 9.5 1.2 1 0 0 1 1 1 0 FGF binding protein 1 (FGF-BP1) Skp1 PF01466.19 ORF69183 - 0.085 13.0 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Skp1 family, dimerisation domain U-box PF04564.15 ORF67658 - 8.1e-24 83.6 0.1 1.3e-23 82.9 0.1 1.3 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 ORF67658 - 7.3e-06 25.7 0.1 4.6e-05 23.2 0.1 2.0 1 1 1 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 ORF67658 - 2.4e-05 24.2 0.0 4.1e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-NOSIP PF15906.5 ORF67658 - 0.0016 18.5 0.0 0.0028 17.7 0.0 1.4 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein DUF4064 PF13273.6 ORF67658 - 0.046 14.0 0.0 0.06 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) T3SS_NleG PF06416.12 ORF67658 - 0.11 12.4 0.2 0.54 10.2 0.1 1.9 1 1 0 1 1 1 0 Effector protein NleG zf-C3HC4_4 PF15227.6 ORF67658 - 0.2 11.9 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 ORF67658 - 0.21 11.5 0.0 0.3 11.0 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Radial_spoke_3 PF06098.11 ORF67573 - 5.3e-27 94.8 1.6 6.1e-27 94.6 1.6 1.0 1 0 0 1 1 1 1 Radial spoke protein 3 adh_short_C2 PF13561.6 ORF67481 - 1.8e-10 40.8 0.0 2.2e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF67481 - 1.5e-08 34.4 0.0 2.6e-08 33.6 0.1 1.4 2 0 0 2 2 2 1 short chain dehydrogenase Endonuclease_7 PF02945.15 ORF67481 - 0.14 12.1 0.2 0.22 11.4 0.0 1.5 2 0 0 2 2 2 0 Recombination endonuclease VII DUF726 PF05277.12 ORF67216 - 2e-14 53.3 0.0 2.5e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF726) Spc7 PF08317.11 ORF65410 - 0.013 14.4 14.8 0.014 14.3 14.8 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein TrbI_Ftype PF09677.10 ORF65410 - 0.019 15.2 0.6 0.019 15.2 0.6 2.0 1 1 1 2 2 2 0 Type-F conjugative transfer system protein (TrbI_Ftype) Spectrin_like PF18373.1 ORF65410 - 0.17 11.9 7.5 1.7 8.8 1.1 3.3 1 1 2 3 3 3 0 Spectrin like domain Plk4_PB2 PF18409.1 ORF65410 - 0.78 10.5 4.6 1.8 9.3 3.5 1.9 1 1 1 2 2 2 0 Polo-like Kinase 4 Polo Box 2 Rotamase PF00639.21 ORF65410 - 6.9 7.7 10.2 1.3 10.1 3.3 2.2 1 1 1 2 2 2 0 PPIC-type PPIASE domain Guanylin PF02058.15 ORF65309 - 0.0054 17.2 0.0 0.0084 16.6 0.0 1.4 1 0 0 1 1 1 1 Guanylin precursor DUF3752 PF12572.8 ORF65251 - 0.00041 20.9 7.3 0.00071 20.1 7.3 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3752) OS-D PF03392.13 ORF65071 - 0.0019 18.2 0.5 0.0034 17.4 0.5 1.4 1 0 0 1 1 1 1 Insect pheromone-binding family, A10/OS-D DUF3519 PF12033.8 ORF63665 - 0.26 11.7 3.1 0.48 10.9 3.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3519) MCD PF05292.11 ORF63423 - 0.023 14.3 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase C-terminal domain MM_CoA_mutase PF01642.22 ORF63127 - 0.081 11.5 2.9 0.096 11.2 2.9 1.1 1 0 0 1 1 1 0 Methylmalonyl-CoA mutase ALMT PF11744.8 ORF63127 - 3.9 6.2 7.3 4.4 6.0 7.3 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter GST_N_3 PF13417.6 ORF63110 - 3.9e-10 40.0 0.0 7e-10 39.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF63110 - 1.7e-09 37.8 0.0 3e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF63110 - 8.4e-07 29.2 0.0 2.1e-06 27.9 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain RNA_pol_Rpb1_5 PF04998.17 ORF62559 - 2.2e-18 66.7 0.5 2.7e-18 66.4 0.5 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 MRP-S28 PF10213.9 ORF62000 - 4.3e-08 33.6 0.0 6.6e-08 33.0 0.0 1.3 1 1 0 1 1 1 1 Mitochondrial ribosomal subunit protein Staphostatin_A PF09022.10 ORF61648 - 0.0032 17.3 0.1 0.0043 16.9 0.1 1.4 1 0 0 1 1 1 1 Staphostatin A Rhomboid_N PF12122.8 ORF61648 - 0.023 14.9 0.0 0.063 13.4 0.0 1.7 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease FF PF01846.19 ORF61648 - 0.036 14.3 0.0 0.068 13.4 0.0 1.5 1 0 0 1 1 1 0 FF domain HAP2-GCS1 PF10699.9 ORF60737 - 1.5 8.8 7.8 43 4.2 7.8 2.9 1 1 0 1 1 1 0 Male gamete fusion factor PAN_4 PF14295.6 ORF6040 - 0.0034 17.3 2.7 0.0034 17.3 2.7 2.1 2 0 0 2 2 2 1 PAN domain PAN_1 PF00024.26 ORF6040 - 0.02 14.8 2.8 0.039 13.9 2.8 1.5 1 0 0 1 1 1 0 PAN domain Ecl1 PF12855.7 ORF59803 - 1.9 9.6 10.4 2.5 9.2 10.4 1.2 1 0 0 1 1 1 0 ECL1/2/3 zinc binding proteins FoP_duplication PF13865.6 ORF59803 - 4 8.0 10.2 2.5 8.7 5.2 2.1 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 Notch PF00066.17 ORF59085 - 0.35 11.4 4.6 26 5.4 1.1 3.3 2 1 1 3 3 3 0 LNR domain OmpH PF03938.14 ORF58723 - 0.97 9.8 9.5 1.2 9.4 9.5 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) YlqD PF11068.8 ORF58723 - 0.99 9.8 9.1 1.3 9.4 9.1 1.1 1 0 0 1 1 1 0 YlqD protein TRAM_LAG1_CLN8 PF03798.16 ORF57579 - 1e-18 67.8 5.7 1.1e-18 67.7 5.7 1.0 1 0 0 1 1 1 1 TLC domain PV_NSP1 PF12433.8 ORF56819 - 0.029 14.7 3.7 0.067 13.5 0.8 2.2 2 0 0 2 2 2 0 Parvovirus non-structural protein 1 PIEZO PF15917.5 ORF56554 - 0.0038 16.7 3.1 0.0049 16.4 3.1 1.1 1 0 0 1 1 1 1 Piezo TAF4 PF05236.14 ORF56554 - 0.0053 16.5 4.3 0.0056 16.5 4.3 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID component TAF4 family DNA_pol_phi PF04931.13 ORF56554 - 0.016 13.4 9.7 0.019 13.1 9.7 1.0 1 0 0 1 1 1 0 DNA polymerase phi Vfa1 PF08432.10 ORF56554 - 0.016 15.5 10.4 0.021 15.1 10.4 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF4820 PF16091.5 ORF56554 - 0.033 13.6 2.7 0.041 13.2 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) NOA36 PF06524.12 ORF56554 - 0.15 11.3 6.2 0.17 11.2 6.2 1.1 1 0 0 1 1 1 0 NOA36 protein NapB PF03892.14 ORF56554 - 0.22 11.5 2.6 0.39 10.7 2.6 1.4 1 0 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) FAM176 PF14851.6 ORF56554 - 0.31 10.7 4.1 0.42 10.3 4.1 1.3 1 0 0 1 1 1 0 FAM176 family DUF4481 PF14800.6 ORF56554 - 0.33 10.4 1.0 0.37 10.2 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) U79_P34 PF03064.16 ORF56554 - 0.87 8.9 9.1 1 8.7 9.1 1.1 1 0 0 1 1 1 0 HSV U79 / HCMV P34 AIM3 PF17096.5 ORF56554 - 0.95 10.4 9.9 1.6 9.7 9.9 1.3 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 CDC45 PF02724.14 ORF56554 - 2.1 6.5 8.9 2.4 6.3 8.9 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF4337 PF14235.6 ORF56554 - 2.2 8.4 5.2 2.9 8.0 5.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) EIIBC-GUT_N PF03612.14 ORF56554 - 2.5 7.8 5.7 3.5 7.3 5.7 1.1 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus FAM178 PF14816.6 ORF56554 - 3.5 6.5 9.4 4.7 6.1 9.4 1.1 1 0 0 1 1 1 0 Family of unknown function, FAM178 DUF3987 PF13148.6 ORF56554 - 4.6 6.2 8.7 6.3 5.7 8.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Staphostatin_A PF09022.10 ORF55593 - 0.0032 17.3 0.1 0.0043 16.9 0.1 1.4 1 0 0 1 1 1 1 Staphostatin A Rhomboid_N PF12122.8 ORF55593 - 0.023 14.9 0.0 0.063 13.4 0.0 1.8 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease FF PF01846.19 ORF55593 - 0.036 14.3 0.0 0.068 13.4 0.0 1.5 1 0 0 1 1 1 0 FF domain zf-C4pol PF14260.6 ORF55416 - 4.2e-08 33.5 7.4 4.2e-08 33.5 7.4 1.5 1 1 0 1 1 1 1 C4-type zinc-finger of DNA polymerase delta DUF2614 PF11023.8 ORF55416 - 0.36 10.9 1.7 2.1 8.5 0.0 2.1 1 1 1 2 2 2 0 Zinc-ribbon containing domain DUF3565 PF12088.8 ORF53968 - 0.26 11.3 2.0 3 7.9 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3565) PV_NSP1 PF12433.8 ORF53685 - 0.029 14.7 3.7 0.067 13.5 0.8 2.2 2 0 0 2 2 2 0 Parvovirus non-structural protein 1 Asp PF00026.23 ORF51957 - 3.4e-16 59.5 0.1 3.6e-16 59.5 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 ORF51957 - 0.0012 19.4 0.0 0.003 18.2 0.0 1.7 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 ORF51957 - 0.062 13.9 0.0 0.19 12.3 0.0 1.8 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Dscam_C PF12355.8 ORF51005 - 0.082 13.9 0.2 0.12 13.4 0.2 1.2 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal Asp PF00026.23 ORF50807 - 3.6e-13 49.6 0.1 4.1e-13 49.4 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease PfkB PF00294.24 ORF50393 - 2.7e-37 128.7 0.2 2.9e-37 128.6 0.2 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF50393 - 8.4e-06 25.3 0.0 1.1e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase DUF572 PF04502.13 ORF49909 - 1.3 8.6 16.0 1.6 8.3 16.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) SLC12 PF03522.15 ORF49909 - 3 6.8 10.4 3.3 6.7 10.4 1.0 1 0 0 1 1 1 0 Solute carrier family 12 Macoilin PF09726.9 ORF49909 - 3 6.3 10.9 3.5 6.1 10.9 1.0 1 0 0 1 1 1 0 Macoilin family Hid1 PF12722.7 ORF49909 - 3.5 5.6 14.0 3.9 5.5 14.0 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein FAM220 PF15487.6 ORF49909 - 8.7 5.9 12.5 11 5.5 12.5 1.1 1 0 0 1 1 1 0 FAM220 family Macoilin PF09726.9 ORF48458 - 1.7 7.1 28.2 1.8 7.0 28.2 1.1 1 0 0 1 1 1 0 Macoilin family GDP_Man_Dehyd PF16363.5 ORF47485 - 0.044 13.2 0.1 0.05 13.0 0.1 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Aa_trans PF01490.18 ORF47089 - 0.0064 15.2 0.2 0.011 14.5 0.0 1.5 2 0 0 2 2 2 1 Transmembrane amino acid transporter protein ATP1G1_PLM_MAT8 PF02038.16 ORF46652 - 0.29 10.6 0.2 0.29 10.6 0.2 2.1 2 1 0 2 2 2 0 ATP1G1/PLM/MAT8 family KH_8 PF17903.1 ORF46523 - 1e-08 35.2 0.0 1.7e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Krr1 KH1 domain KH_1 PF00013.29 ORF46523 - 4.5e-06 26.4 0.6 8.7e-06 25.5 0.6 1.4 1 0 0 1 1 1 1 KH domain Oxidored_FMN PF00724.20 ORF45955 - 2.3e-05 23.8 0.0 3.1e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family MFS_1 PF07690.16 ORF456 - 7.2e-05 21.9 0.0 7.3e-05 21.9 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PTR2 PF00854.21 ORF456 - 0.0057 15.5 0.6 0.0072 15.2 0.6 1.1 1 0 0 1 1 1 1 POT family MFS_4 PF06779.14 ORF456 - 0.12 11.7 0.2 0.14 11.4 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB Amidase_2 PF01510.25 ORF45040 - 8.1e-19 68.3 0.1 1e-18 68.0 0.1 1.1 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase Ribosomal_S13_N PF08069.12 ORF45012 - 6.6e-31 106.1 0.0 1.8e-30 104.7 0.0 1.7 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 ORF45012 - 2e-13 50.4 0.4 3.1e-13 49.7 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 Ketoacyl-synt_C PF02801.22 ORF44712 - 1.3e-37 128.4 1.4 1.6e-37 128.2 1.4 1.1 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 ORF44712 - 0.023 15.2 0.2 0.082 13.4 0.0 1.9 2 0 0 2 2 2 0 Ketoacyl-synthetase C-terminal extension Cupin_1 PF00190.22 ORF40930 - 0.044 13.4 0.0 0.056 13.0 0.0 1.3 1 0 0 1 1 1 0 Cupin Kinesin PF00225.23 ORF37979 - 7.3e-26 90.9 0.7 1.3e-25 90.1 0.7 1.4 1 1 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF37979 - 8e-16 58.3 0.1 5.9e-14 52.3 0.0 2.1 1 1 1 2 2 2 2 Microtubule binding Mrx7 PF10906.8 ORF3656 - 0.0094 16.2 0.3 0.019 15.2 0.3 1.5 1 0 0 1 1 1 1 MIOREX complex component 7 AAA PF00004.29 ORF3656 - 0.01 16.3 0.1 0.013 15.9 0.1 1.1 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) BRAP2 PF07576.12 ORF3656 - 0.029 14.6 0.1 0.047 13.9 0.1 1.4 1 0 0 1 1 1 0 BRCA1-associated protein 2 USP7_ICP0_bdg PF12436.8 ORF3656 - 0.039 13.3 0.1 0.043 13.1 0.1 1.1 1 0 0 1 1 1 0 ICP0-binding domain of Ubiquitin-specific protease 7 HAP2-GCS1 PF10699.9 ORF34886 - 1.5 8.8 7.8 43 4.2 7.8 2.9 1 1 0 1 1 1 0 Male gamete fusion factor adh_short PF00106.25 ORF33702 - 1.2e-23 83.6 0.0 1.6e-23 83.2 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF33702 - 5.3e-14 52.3 0.0 6.5e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF33702 - 0.0024 17.8 0.0 0.0045 16.9 0.0 1.5 1 1 0 1 1 1 1 KR domain RRP7 PF12923.7 ORF32630 - 8.6e-10 38.8 20.0 3.1e-09 37.0 20.0 1.8 1 1 0 1 1 1 1 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain Asp PF00026.23 ORF3208 - 3.4e-16 59.5 0.1 3.6e-16 59.5 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 ORF3208 - 0.0012 19.4 0.0 0.003 18.2 0.0 1.7 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 ORF3208 - 0.062 13.9 0.0 0.19 12.3 0.0 1.8 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Peptidase_Mx PF15887.5 ORF30872 - 0.031 13.7 0.1 0.12 11.7 0.0 1.9 2 0 0 2 2 2 0 Putative zinc-binding metallo-peptidase PdaC PF13739.6 ORF30598 - 0.12 13.4 1.7 0.18 12.8 1.6 1.5 1 1 0 1 1 1 0 Deacetylase PdaC PrlF_antitoxin PF15937.5 ORF29887 - 3.2e-38 130.1 0.0 4.7e-38 129.6 0.0 1.2 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin MazE_antitoxin PF04014.18 ORF29887 - 0.042 13.8 0.0 0.084 12.8 0.0 1.5 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin Pkinase PF00069.25 ORF29880 - 2.1e-23 83.0 0.5 2.8e-23 82.6 0.5 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29880 - 2.5e-10 40.1 0.1 3.2e-10 39.8 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase zf-C2HC_2 PF13913.6 ORF29769 - 3.2e-12 46.0 2.0 6.1e-12 45.1 2.0 1.5 1 0 0 1 1 1 1 zinc-finger of a C2HC-type DUF2318 PF10080.9 ORF29769 - 0.027 14.6 0.3 0.053 13.6 0.3 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) c-SKI_SMAD_bind PF08782.10 ORF29769 - 0.047 13.9 1.1 0.074 13.3 0.3 1.6 1 1 1 2 2 2 0 c-SKI Smad4 binding domain Pepsin-I3 PF06394.13 ORF29712 - 0.0097 16.1 0.1 0.019 15.2 0.1 1.5 1 0 0 1 1 1 1 Pepsin inhibitor-3-like repeated domain Alpha-2-MRAP_C PF06401.11 ORF29712 - 0.014 15.3 4.1 0.029 14.3 4.1 1.5 1 1 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain PHD PF00628.29 ORF29712 - 0.024 14.5 0.3 0.04 13.8 0.3 1.4 1 0 0 1 1 1 0 PHD-finger FAM183 PF14886.6 ORF28919 - 0.025 15.3 0.0 0.034 14.9 0.0 1.2 1 0 0 1 1 1 0 FAM183A and FAM183B related Kelch_4 PF13418.6 ORF26965 - 1.9e-23 82.2 0.3 2.2e-08 34.0 0.0 3.1 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF26965 - 4.5e-22 77.4 0.0 2e-09 36.9 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_2 PF07646.15 ORF26965 - 1.1e-19 69.6 1.2 3.5e-07 30.0 0.0 3.7 3 1 0 3 3 3 3 Kelch motif Kelch_3 PF13415.6 ORF26965 - 1.5e-19 69.8 1.3 3.8e-07 30.2 0.0 4.1 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF26965 - 8.3e-19 67.2 0.7 2.1e-07 31.0 0.0 3.2 1 1 2 3 3 3 3 Kelch motif Kelch_5 PF13854.6 ORF26965 - 9.8e-18 63.7 0.0 1.3e-06 28.3 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Thioredoxin_8 PF13905.6 ORF26929 - 1.7e-08 34.7 0.4 3.6e-08 33.6 0.0 1.6 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin PF00085.20 ORF26929 - 6.8e-05 22.8 0.8 0.00013 21.9 0.8 1.5 1 0 0 1 1 1 1 Thioredoxin Redoxin PF08534.10 ORF26929 - 0.00025 20.8 0.1 0.00037 20.2 0.1 1.2 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 ORF26929 - 0.0026 17.7 0.1 0.0033 17.3 0.1 1.2 1 0 0 1 1 1 1 AhpC/TSA family Hemerythrin PF01814.23 ORF26929 - 0.12 13.0 0.0 5.1 7.7 0.0 2.1 2 0 0 2 2 2 0 Hemerythrin HHE cation binding domain p450 PF00067.22 ORF26139 - 0.0017 17.2 0.2 0.002 17.0 0.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 B-block_TFIIIC PF04182.12 ORF25966 - 0.05 13.8 0.6 0.1 12.8 0.1 1.7 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC Dscam_C PF12355.8 ORF25232 - 0.053 14.5 1.9 0.073 14.0 1.9 1.2 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal DUF4744 PF15918.5 ORF25209 - 0.37 11.7 4.2 2.6 8.9 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4744) Cpn10 PF00166.21 ORF24643 - 0.0012 18.9 0.1 15 5.7 0.0 3.1 2 1 1 3 3 3 3 Chaperonin 10 Kd subunit PI3_PI4_kinase PF00454.27 ORF244 - 5.2e-13 49.4 0.0 7.3e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase zf-RING_2 PF13639.6 ORF244 - 0.0013 19.1 4.5 0.084 13.2 0.1 2.5 3 0 0 3 3 3 2 Ring finger domain zf-C3HC4_2 PF13923.6 ORF244 - 0.042 13.7 2.4 1.5 8.8 0.1 2.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) C1_1 PF00130.22 ORF244 - 0.07 13.0 2.1 3 7.8 0.2 2.2 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) FANCL_C PF11793.8 ORF244 - 0.075 13.2 0.1 0.075 13.2 0.1 2.1 3 0 0 3 3 3 0 FANCL C-terminal domain RINGv PF12906.7 ORF244 - 0.53 10.5 2.9 0.6 10.3 0.1 2.3 2 1 0 2 2 2 0 RING-variant domain Sugar_tr PF00083.24 ORF23664 - 1.7e-25 89.8 2.8 2e-25 89.6 2.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF23664 - 5e-14 52.0 3.5 5.4e-14 51.9 3.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF23664 - 0.017 14.0 2.7 0.015 14.2 1.9 1.3 1 1 0 1 1 1 0 MFS_1 like family WTF PF03303.13 ORF23664 - 0.029 14.1 3.2 0.029 14.1 3.2 1.5 2 0 0 2 2 2 0 WTF protein ERGIC_N PF13850.6 ORF23159 - 0.0003 21.1 1.3 0.00052 20.3 1.3 1.6 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4064 PF13273.6 ORF23159 - 0.0053 17.0 0.5 0.0094 16.2 0.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) ABC_tran_2 PF16949.5 ORF23159 - 0.012 14.5 0.1 0.015 14.2 0.1 1.1 1 0 0 1 1 1 0 Putative ATP-binding cassette Baculo_11_kDa PF06143.11 ORF23159 - 0.016 14.8 0.4 0.027 14.0 0.4 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family Prominin PF05478.11 ORF23159 - 0.027 12.4 1.3 0.032 12.2 1.3 1.0 1 0 0 1 1 1 0 Prominin DUF4446 PF14584.6 ORF23159 - 0.042 13.8 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF4834 PF16118.5 ORF23159 - 0.095 13.7 0.3 0.19 12.7 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Pkinase PF00069.25 ORF23124 - 0.013 14.8 2.3 0.15 11.4 0.0 2.2 1 1 0 2 2 2 0 Protein kinase domain Collectrin PF16959.5 ORF23124 - 0.045 13.5 0.9 0.065 13.0 0.9 1.3 1 0 0 1 1 1 0 Renal amino acid transporter DENN PF02141.21 ORF22506 - 2.1e-20 73.5 1.3 2.1e-20 73.5 1.3 1.4 2 0 0 2 2 2 1 DENN (AEX-3) domain LOB PF03195.14 ORF22118 - 0.025 15.1 0.2 0.05 14.2 0.2 1.5 1 0 0 1 1 1 0 Lateral organ boundaries (LOB) domain HTH_ABP1_N PF18107.1 ORF22118 - 0.17 11.7 0.8 0.29 10.9 0.8 1.5 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain Med15_fungi PF05397.12 ORF22007 - 0.028 14.7 0.5 0.052 13.8 0.5 1.4 1 0 0 1 1 1 0 Mediator complex subunit 15 DUF1999 PF09390.10 ORF22007 - 0.13 11.9 0.1 0.32 10.6 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1999) DUF2001 PF09393.10 ORF22007 - 0.14 12.2 1.9 3.2 7.7 1.3 2.2 2 0 0 2 2 2 0 Phage tail tube protein GYF PF02213.16 ORF21761 - 3e-12 46.0 0.1 4.1e-12 45.6 0.1 1.2 1 0 0 1 1 1 1 GYF domain GYF_2 PF14237.6 ORF21761 - 6.7e-07 29.0 0.1 1.2e-06 28.2 0.1 1.4 1 0 0 1 1 1 1 GYF domain 2 DCP2 PF05026.13 ORF21761 - 0.25 11.7 0.0 0.36 11.2 0.0 1.2 1 0 0 1 1 1 0 Dcp2, box A domain MSP1a PF11670.8 ORF21761 - 0.54 9.5 6.4 0.85 8.9 0.0 2.1 1 1 1 2 2 2 0 Major surface protein 1a (MSP1a) Transmemb_17 PF09799.9 ORF20198 - 1.6e-22 80.1 15.3 2.1e-22 79.7 15.3 1.2 1 0 0 1 1 1 1 Predicted membrane protein Orf78 PF06024.12 ORF20198 - 0.18 12.2 5.7 0.18 12.1 0.3 2.4 2 0 0 2 2 2 0 Orf78 (ac78) TMEM247 PF15444.6 ORF20198 - 0.29 11.1 1.6 0.85 9.6 0.0 1.9 2 0 0 2 2 2 0 Transmembrane protein 247 DUF2207 PF09972.9 ORF20198 - 0.32 9.7 2.8 0.49 9.1 2.8 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) MFS_1 PF07690.16 ORF19158 - 7.2e-05 21.9 0.0 7.3e-05 21.9 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PTR2 PF00854.21 ORF19158 - 0.0057 15.5 0.6 0.0072 15.2 0.6 1.1 1 0 0 1 1 1 1 POT family MFS_4 PF06779.14 ORF19158 - 0.12 11.7 0.2 0.14 11.4 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB ThiS-like PF14453.6 ORF18161 - 0.076 13.1 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 ThiS-like ubiquitin PgaD PF13994.6 ORF16922 - 9.4 6.3 8.9 1.6 8.8 0.1 2.5 2 1 1 3 3 3 0 PgaD-like protein Ank_2 PF12796.7 ORF16587 - 1.6e-31 108.7 5.7 2.2e-16 60.2 0.6 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF16587 - 3.9e-24 84.0 4.3 3.2e-05 24.2 0.1 5.0 5 0 0 5 5 5 5 Ankyrin repeat Ank_5 PF13857.6 ORF16587 - 5.9e-23 80.6 5.0 8.5e-07 29.1 0.1 5.0 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF16587 - 5e-22 78.0 1.0 6.9e-07 29.7 0.0 3.1 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF16587 - 4.2e-16 57.4 1.6 0.037 14.6 0.0 5.1 5 0 0 5 5 5 5 Ankyrin repeat DUF374 PF04028.13 ORF16587 - 0.11 12.0 0.8 8.6 6.0 0.0 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF374) Asp PF00026.23 ORF15734 - 6.3e-20 71.8 0.4 6.8e-20 71.7 0.4 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF2694 PF10904.8 ORF1458 - 0.083 13.0 0.2 1.5 8.9 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2694) ELFV_dehydrog_N PF02812.18 ORF1368 - 2.1e-33 115.0 0.0 2.9e-33 114.5 0.0 1.2 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ELFV_dehydrog PF00208.21 ORF1368 - 0.047 13.4 0.3 0.13 11.9 0.1 1.8 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FidL_like PF15941.5 ORF13437 - 0.087 13.3 0.3 0.15 12.6 0.3 1.4 1 0 0 1 1 1 0 FidL-like putative membrane protein OMPdecase PF00215.24 ORF12871 - 1.3e-23 83.8 0.1 1.5e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Ubie_methyltran PF01209.18 ORF1215 - 0.016 14.6 0.0 0.021 14.2 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family 2OG-FeII_Oxy_3 PF13640.6 ORF111871 - 3.5e-09 37.4 0.0 4.4e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-Fe_Oxy_2 PF10014.9 ORF111871 - 0.023 14.5 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe dioxygenase Asp_Arg_Hydrox PF05118.15 ORF111871 - 0.026 14.4 0.0 0.035 13.9 0.0 1.2 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase PhyH PF05721.13 ORF111871 - 0.049 13.9 0.0 0.053 13.8 0.0 1.2 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) Cupin_2 PF07883.11 ORF111871 - 0.1 12.3 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Cupin domain PV_NSP1 PF12433.8 ORF111867 - 0.029 14.7 3.7 0.067 13.5 0.8 2.2 2 0 0 2 2 2 0 Parvovirus non-structural protein 1 DUF4116 PF13475.6 ORF111222 - 0.22 11.3 2.1 3.5 7.4 0.1 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4116) Cyt-b5 PF00173.28 ORF110792 - 7.4e-07 29.2 0.1 1.1e-06 28.6 0.1 1.4 1 1 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DUF4923 PF16270.5 ORF110349 - 0.057 13.3 0.1 0.074 12.9 0.1 1.2 1 0 0 1 1 1 0 Lipocalin-like domain (DUF4923) MORN_2 PF07661.13 ORF110349 - 0.36 11.2 6.5 2.6 8.6 0.2 3.6 3 0 0 3 3 3 0 MORN repeat variant MORN PF02493.20 ORF110349 - 0.72 9.9 4.6 43 4.3 0.0 3.7 3 0 0 3 3 3 0 MORN repeat Pkinase PF00069.25 ORF108064 - 6.2e-16 58.6 0.0 7.1e-16 58.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF108064 - 5.9e-08 32.3 0.0 6.1e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF108064 - 1e-07 31.1 0.0 1.1e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF108064 - 0.00028 20.9 0.0 0.00052 20.0 0.0 1.5 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF108064 - 0.0015 17.6 0.2 0.0018 17.3 0.2 1.1 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Choline_kinase PF01633.20 ORF108064 - 0.034 13.7 0.2 0.047 13.3 0.2 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 ORF108064 - 0.12 11.7 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Staphostatin_A PF09022.10 ORF106886 - 0.0032 17.3 0.1 0.0043 16.9 0.1 1.4 1 0 0 1 1 1 1 Staphostatin A Rhomboid_N PF12122.8 ORF106886 - 0.023 14.9 0.0 0.063 13.4 0.0 1.8 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease FF PF01846.19 ORF106886 - 0.036 14.3 0.0 0.068 13.4 0.0 1.5 1 0 0 1 1 1 0 FF domain TetR_C_34 PF17929.1 ORF106098 - 0.033 14.3 0.1 0.043 13.9 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain UBA PF00627.31 ORF104145 - 0.0067 16.3 0.1 0.012 15.5 0.1 1.4 1 0 0 1 1 1 1 UBA/TS-N domain Acetyltransf_1 PF00583.25 ORF103323 - 1.1e-16 61.2 0.0 1.3e-16 60.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF103323 - 9.2e-14 51.5 0.0 1.1e-13 51.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF103323 - 2.7e-11 43.7 0.0 3.7e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF103323 - 1.9e-07 30.9 0.0 2.7e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF103323 - 8.4e-07 29.1 0.0 1.1e-06 28.7 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF103323 - 0.00014 21.9 0.0 0.00022 21.3 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 ORF103323 - 0.00044 20.9 0.0 0.00047 20.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 ORF103323 - 0.031 14.0 0.0 0.041 13.6 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Rav1p_C PF12234.8 ORF102929 - 0.019 13.4 0.1 0.023 13.1 0.1 1.1 1 0 0 1 1 1 0 RAVE protein 1 C terminal Ribosomal_S13_N PF08069.12 ORF102886 - 5.2e-27 93.7 1.3 9.6e-27 92.8 0.2 2.0 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 ORF102886 - 2.3e-13 50.1 1.4 2.3e-13 50.1 1.4 1.6 2 0 0 2 2 2 1 Ribosomal protein S15 GTP_cyclohydroI PF01227.22 ORF102886 - 0.073 12.5 0.2 0.41 10.0 0.0 2.2 2 1 1 3 3 3 0 GTP cyclohydrolase I YflT PF11181.8 ORF102886 - 0.1 13.1 0.0 0.13 12.7 0.0 1.4 1 1 0 1 1 1 0 Heat induced stress protein YflT Asp PF00026.23 ORF102841 - 3.4e-16 59.5 0.1 3.6e-16 59.5 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 ORF102841 - 0.0012 19.4 0.0 0.003 18.2 0.0 1.7 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 ORF102841 - 0.062 13.9 0.0 0.19 12.3 0.0 1.8 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease UPF0561 PF10573.9 ORF100257 - 0.038 14.1 0.0 0.06 13.5 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 CLN5 PF15014.6 NODE_44357_length_448_cov_1.692494_g36627_i0reverse_frame_1 - 0.056 13.1 0.3 0.063 12.9 0.3 1.3 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 5 DUF4231 PF14015.6 NODE_44354_length_448_cov_2.290557_g36624_i0forward_frame_1 - 0.44 11.0 3.8 2.3 8.8 3.8 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks147.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks147.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks147.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks147.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-Dof PF02701.15 NODE_44348_length_448_cov_2.433414_g36618_i0reverse_frame_1 - 0.049 13.8 1.1 0.68 10.1 0.2 2.3 2 0 0 2 2 2 0 Dof domain, zinc finger YkuD PF03734.14 NODE_44345_length_448_cov_3.113801_g36615_i0reverse_frame_1 - 1e-07 32.5 0.1 1.2e-07 32.3 0.1 1.1 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain LysM PF01476.20 NODE_44345_length_448_cov_3.113801_g36615_i0reverse_frame_1 - 1.4e-07 31.4 0.0 3e-07 30.4 0.0 1.6 1 0 0 1 1 1 1 LysM domain OB_NTP_bind PF07717.16 NODE_44344_length_448_cov_3.159806_g36614_i0reverse_frame_1 - 0.093 13.1 1.1 0.098 13.0 0.1 1.5 2 0 0 2 2 2 0 Oligonucleotide/oligosaccharide-binding (OB)-fold Hydin_ADK PF17213.3 NODE_44340_length_448_cov_5.435835_g36610_i0reverse_frame_1 - 0.29 11.4 2.2 0.34 11.1 2.2 1.1 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain Campylo_MOMP PF05538.11 NODE_44334_length_448_cov_79.184019_g36604_i0reverse_frame_1 - 0.19 10.7 0.1 0.24 10.3 0.1 1.1 1 0 0 1 1 1 0 Campylobacter major outer membrane protein THRAP3_BCLAF1 PF15440.6 NODE_44334_length_448_cov_79.184019_g36604_i0forward_frame_1 - 0.2 10.7 1.5 0.22 10.5 1.5 1.0 1 0 0 1 1 1 0 THRAP3/BCLAF1 family mTERF PF02536.14 NODE_44327_length_448_cov_93.726392_g36597_i0forward_frame_1 - 4.8e-13 48.7 0.0 5.5e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 mTERF ATP_Ca_trans_C PF12424.8 NODE_44327_length_448_cov_93.726392_g36597_i0forward_frame_1 - 0.071 13.6 0.1 5.8 7.5 0.0 2.5 2 0 0 2 2 2 0 Plasma membrane calcium transporter ATPase C terminal Pox_I5 PF04713.12 NODE_44326_length_448_cov_94.215496_g36596_i0reverse_frame_1 - 0.029 14.4 0.8 0.053 13.6 0.8 1.4 1 0 0 1 1 1 0 Poxvirus protein I5 HTH_AraC PF00165.23 NODE_44325_length_448_cov_95.714286_g36595_i0reverse_frame_1 - 0.063 13.4 0.5 0.14 12.3 0.5 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family TMEM240 PF15207.6 NODE_44322_length_448_cov_103.283293_g36592_i0forward_frame_1 - 0.029 14.1 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 TMEM240 family MORN PF02493.20 NODE_44312_length_448_cov_187.937046_g36582_i0forward_frame_1 - 2.6e-25 86.7 38.9 2.2e-06 27.2 1.9 6.3 6 0 0 6 6 6 6 MORN repeat DAD PF02109.16 NODE_44305_length_448_cov_531.205811_g36576_i0reverse_frame_1 - 0.0093 16.3 4.0 0.016 15.5 4.0 1.4 1 0 0 1 1 1 1 DAD family TRP PF06011.12 NODE_44305_length_448_cov_531.205811_g36576_i0reverse_frame_1 - 0.02 13.7 8.6 0.024 13.4 8.6 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel ER_lumen_recept PF00810.18 NODE_44305_length_448_cov_531.205811_g36576_i0reverse_frame_1 - 2.6 8.9 13.6 2.9 8.7 12.4 1.5 1 1 1 2 2 2 0 ER lumen protein retaining receptor DUF3566 PF12089.8 NODE_44305_length_448_cov_531.205811_g36576_i0reverse_frame_1 - 3.5 8.0 9.6 3.3 8.1 7.7 1.7 1 1 1 2 2 2 0 Transmembrane domain of unknown function (DUF3566) DUF4462 PF14692.6 NODE_44289_length_449_cov_3.057971_g36563_i0forward_frame_1 - 0.0048 16.3 0.1 0.0095 15.4 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4462) DUF3522 PF12036.8 NODE_44286_length_449_cov_3.079710_g36560_i0reverse_frame_1 - 0.069 13.4 0.2 0.089 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3522) NifW PF03206.14 NODE_44281_length_449_cov_58.260870_g36555_i0reverse_frame_1 - 0.054 14.0 0.4 0.095 13.2 0.4 1.4 1 0 0 1 1 1 0 Nitrogen fixation protein NifW Histone_H2A_C PF16211.5 NODE_44280_length_449_cov_59.050725_g36554_i0reverse_frame_1 - 0.38 10.5 4.1 0.81 9.5 4.1 1.5 1 0 0 1 1 1 0 C-terminus of histone H2A DnaJ PF00226.31 NODE_44278_length_449_cov_63.896135_g36552_i0reverse_frame_1 - 2.3e-17 62.8 0.0 4.9e-17 61.8 0.0 1.5 1 0 0 1 1 1 1 DnaJ domain PSI_integrin PF17205.3 NODE_44273_length_449_cov_80.913043_g36547_i0reverse_frame_1 - 1.7 8.5 6.0 0.99 9.2 2.7 2.2 2 1 0 2 2 2 0 Integrin plexin domain LUC7 PF03194.15 NODE_44252_length_449_cov_224.456522_g36527_i0forward_frame_1 - 2.6e-08 33.9 9.7 2.6e-08 33.9 9.7 2.0 1 1 1 2 2 2 1 LUC7 N_terminus Rpr2 PF04032.16 NODE_44252_length_449_cov_224.456522_g36527_i0forward_frame_1 - 0.021 15.1 0.0 0.021 15.1 0.0 2.3 2 1 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-C2H2_3 PF13878.6 NODE_44252_length_449_cov_224.456522_g36527_i0forward_frame_1 - 0.048 13.5 0.4 0.12 12.2 0.1 1.9 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF883 PF05957.13 NODE_44252_length_449_cov_224.456522_g36527_i0forward_frame_1 - 0.77 10.4 9.2 16 6.1 0.1 2.8 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF547 PF04784.14 NODE_44249_length_449_cov_350.012077_g36524_i0forward_frame_1 - 0.099 12.7 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF547 ANAPC8 PF04049.13 NODE_44248_length_449_cov_365.809179_g36523_i0reverse_frame_1 - 0.013 15.5 0.1 0.018 15.1 0.1 1.1 1 0 0 1 1 1 0 Anaphase promoting complex subunit 8 / Cdc23 NPCC PF08058.11 NODE_44248_length_449_cov_365.809179_g36523_i0forward_frame_1 - 0.14 12.2 0.8 0.2 11.7 0.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component Na_H_Exchanger PF00999.21 NODE_44234_length_450_cov_2.657831_g36512_i0forward_frame_1 - 3.6e-25 88.6 8.7 4.1e-25 88.4 8.7 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Wzy_C_2 PF11846.8 NODE_44234_length_450_cov_2.657831_g36512_i0forward_frame_1 - 0.053 13.4 0.2 0.085 12.8 0.2 1.3 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal DUF4674 PF15719.5 NODE_44221_length_450_cov_35.587952_g36500_i0forward_frame_1 - 1.1 9.3 3.5 2.7 8.0 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4674) Nrap_D6 PF17407.2 NODE_44217_length_450_cov_70.840964_g36496_i0forward_frame_1 - 0.13 12.5 0.8 0.92 9.7 0.4 2.0 1 1 1 2 2 2 0 Nrap protein domain 6 DUF1096 PF06493.11 NODE_44217_length_450_cov_70.840964_g36496_i0forward_frame_1 - 1.8 9.1 5.7 3.9 8.0 5.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1096) Histone_H2A_C PF16211.5 NODE_44200_length_450_cov_118.872289_g36479_i0reverse_frame_1 - 0.47 10.2 2.3 0.83 9.4 2.3 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A Ribosomal_S9 PF00380.19 NODE_44196_length_450_cov_180.207229_g36475_i0reverse_frame_1 - 1.6e-24 86.7 0.0 1.8e-24 86.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S9/S16 SecIII_SopE_N PF05364.14 NODE_44191_length_450_cov_294.624096_g36470_i0forward_frame_1 - 1.4 9.0 7.6 4.5 7.4 0.3 2.5 2 1 0 2 2 2 0 Salmonella type III secretion SopE effector N-terminus MFS_1 PF07690.16 NODE_44176_length_451_cov_2.002404_g36459_i0reverse_frame_3 - 2.2e-07 30.2 6.3 2.4e-07 30.0 6.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_44176_length_451_cov_2.002404_g36459_i0reverse_frame_3 - 0.00015 20.8 7.9 0.00016 20.7 7.3 1.4 1 1 0 1 1 1 1 Sugar (and other) transporter Xan_ur_permease PF00860.20 NODE_44173_length_451_cov_2.242788_g36456_i0forward_frame_3 - 1.1e-39 136.2 11.0 1.2e-39 136.1 11.0 1.0 1 0 0 1 1 1 1 Permease family Med25_VWA PF11265.8 NODE_44171_length_451_cov_2.531250_g36454_i0reverse_frame_3 - 0.03 14.2 0.1 0.04 13.7 0.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 25 von Willebrand factor type A OapA_N PF08525.11 NODE_44171_length_451_cov_2.531250_g36454_i0reverse_frame_2 - 1e-08 34.9 2.5 1.4e-08 34.4 2.5 1.2 1 0 0 1 1 1 1 Opacity-associated protein A N-terminal motif OapA PF04225.12 NODE_44171_length_451_cov_2.531250_g36454_i0reverse_frame_2 - 0.00052 20.1 0.0 0.00078 19.5 0.0 1.3 1 0 0 1 1 1 1 Opacity-associated protein A LysM-like domain DUF4870 PF09685.10 NODE_44171_length_451_cov_2.531250_g36454_i0forward_frame_3 - 0.13 12.4 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4870) TRIC PF05197.13 NODE_44170_length_451_cov_2.550481_g36453_i0reverse_frame_3 - 0.078 12.5 0.0 0.12 11.9 0.0 1.4 1 1 0 1 1 1 0 TRIC channel Tubulin PF00091.25 NODE_44163_length_451_cov_2.913462_g36446_i0forward_frame_3 - 1.6e-08 35.0 0.0 2e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FAP PF07174.11 NODE_44159_length_451_cov_3.024038_g36442_i0forward_frame_3 - 0.74 9.2 10.1 0.84 9.0 10.1 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) YopE_N PF09020.10 NODE_44155_length_451_cov_4.322115_g36438_i0forward_frame_2 - 0.017 15.4 0.0 0.025 14.8 0.0 1.3 1 0 0 1 1 1 0 YopE, N terminal PqiA PF04403.13 NODE_44144_length_451_cov_75.983173_g36427_i0reverse_frame_2 - 0.15 11.9 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Paraquat-inducible protein A DUF2393 PF09624.10 NODE_44144_length_451_cov_75.983173_g36427_i0forward_frame_2 - 0.026 14.5 2.1 0.045 13.8 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) ATG16 PF08614.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 8e-05 23.0 11.7 0.00012 22.4 11.7 1.3 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) NPV_P10 PF05531.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.00025 21.5 1.9 0.00025 21.5 1.9 2.3 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein FlxA PF14282.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.0028 17.6 22.3 0.31 11.1 22.3 2.2 1 1 0 1 1 1 1 FlxA-like protein DUF1515 PF07439.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.01 15.9 0.6 0.01 15.9 0.6 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF1515) HAUS6_N PF14661.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.012 15.2 7.0 0.016 14.8 7.0 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus AAA_13 PF13166.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.016 13.9 11.0 0.02 13.6 11.0 1.2 1 0 0 1 1 1 0 AAA domain CENP-F_leu_zip PF10473.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.023 14.7 18.7 0.68 10.0 18.7 2.1 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SlyX PF04102.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.025 15.2 11.1 0.059 14.0 7.6 2.2 2 0 0 2 2 2 0 SlyX Syntaxin-6_N PF09177.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.043 14.4 8.6 0.095 13.3 8.6 1.6 1 1 0 1 1 1 0 Syntaxin 6, N-terminal V_ATPase_I PF01496.19 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.055 11.4 11.2 0.066 11.1 11.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3450 PF11932.8 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.062 12.6 11.3 0.07 12.4 10.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Noelin-1 PF12308.8 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.07 13.1 8.0 0.038 14.0 4.2 2.0 1 1 1 2 2 2 0 Neurogenesis glycoprotein HAUS-augmin3 PF14932.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.086 12.4 8.5 0.11 12.1 8.5 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 TPR_MLP1_2 PF07926.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.093 12.8 15.6 0.047 13.8 4.9 2.1 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.1 12.0 9.0 0.13 11.6 9.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HTH_25 PF13413.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.12 12.3 1.4 0.27 11.1 1.4 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain CENP-F_N PF10481.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.14 11.8 15.0 0.049 13.3 11.9 1.7 1 1 0 1 1 1 0 Cenp-F N-terminal domain KLRAQ PF10205.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.14 12.4 16.3 0.14 12.4 2.8 3.0 1 1 2 3 3 3 0 Predicted coiled-coil domain-containing protein bZIP_2 PF07716.15 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.17 12.0 15.3 1.3 9.2 0.8 3.3 2 1 1 3 3 3 0 Basic region leucine zipper Golgin_A5 PF09787.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.28 10.6 15.9 0.63 9.5 15.9 1.5 1 1 0 1 1 1 0 Golgin subfamily A member 5 Cep57_CLD_2 PF14197.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.32 11.1 12.6 0.16 12.0 6.7 2.3 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 DUF489 PF04356.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.37 10.8 4.2 0.61 10.1 4.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF489) LPP PF04728.13 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.38 11.2 14.9 1.2 9.6 0.3 3.4 1 1 0 2 2 2 0 Lipoprotein leucine-zipper Nas2_N PF18265.1 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.42 10.6 9.4 2.5 8.1 0.1 3.5 1 1 2 3 3 3 0 Nas2 N_terminal domain CENP-Q PF13094.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.49 10.6 9.9 2.6 8.2 6.1 2.1 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Lectin_N PF03954.14 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.51 10.1 7.3 0.36 10.6 2.1 2.1 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Cytochrom_B562 PF07361.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.56 10.9 10.9 1.4 9.6 9.1 2.1 1 1 1 2 2 2 0 Cytochrome b562 GvpL_GvpF PF06386.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.58 10.0 4.0 0.81 9.6 4.0 1.2 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF DUF4140 PF13600.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.64 10.5 13.0 5.8 7.4 1.8 3.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Lebercilin PF15619.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.71 9.5 18.7 1.2 8.8 11.3 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease FlaC_arch PF05377.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.73 10.3 16.9 0.54 10.7 1.1 3.5 2 1 2 4 4 4 0 Flagella accessory protein C (FlaC) DUF948 PF06103.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.8 10.0 5.2 5.7 7.3 0.6 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Cob_adeno_trans PF01923.18 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.83 9.8 4.6 2 8.5 4.5 1.6 1 1 0 1 1 1 0 Cobalamin adenosyltransferase DivIC PF04977.15 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.88 9.4 21.4 1.4 8.7 3.2 3.1 1 1 2 3 3 3 0 Septum formation initiator BRE1 PF08647.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.93 9.6 20.3 0.55 10.3 13.2 2.3 1 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase Rho_Binding PF08912.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.1 10.2 19.4 3.2 8.7 6.3 3.0 1 1 2 3 3 3 0 Rho Binding DUF4695 PF15766.5 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.2 9.4 7.5 0.3 11.3 2.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4695) Allexi_40kDa PF05549.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.2 8.6 9.1 0.92 9.0 6.4 1.7 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF16 PF01519.16 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.4 9.5 17.5 50 4.5 17.5 2.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 FapA PF03961.13 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.6 7.3 17.4 2.9 6.4 17.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A BLOC1_2 PF10046.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.6 9.1 16.4 1.7 9.0 6.6 2.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Spc24 PF08286.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.8 8.9 15.4 5.1 7.4 10.7 2.8 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 GrpE PF01025.19 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.8 8.2 18.4 1.5 8.5 4.6 2.7 1 1 1 2 2 2 0 GrpE Phage_GP20 PF06810.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.9 8.3 20.3 0.52 10.1 11.8 2.1 1 1 1 2 2 2 0 Phage minor structural protein GP20 APG6_N PF17675.1 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2 9.0 16.8 4.8 7.7 16.4 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region Tropomyosin_1 PF12718.7 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2 8.5 21.4 3.4 7.8 14.3 2.3 1 1 1 2 2 2 0 Tropomyosin like Csm1_N PF18504.1 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2.1 8.8 18.2 4 7.9 0.6 3.2 1 1 2 3 3 3 0 Csm1 N-terminal domain Baculo_PEP_C PF04513.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2.3 8.3 6.7 1.3 9.1 2.4 1.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus ALMT PF11744.8 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2.7 6.7 9.7 3 6.6 9.7 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter MetOD2 PF18548.1 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2.9 8.0 13.4 3.2 7.9 2.2 2.6 1 1 1 2 2 2 0 Metanogen output domain 2 DUF4200 PF13863.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 3.1 8.2 22.8 24 5.3 6.7 3.1 1 1 1 3 3 3 0 Domain of unknown function (DUF4200) Gon7 PF08738.10 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 3.1 7.9 9.7 1.7 8.7 0.1 2.6 1 1 1 2 2 2 0 Gon7 family TMPIT PF07851.13 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 3.5 6.8 15.1 0.95 8.7 10.4 1.8 1 1 1 2 2 2 0 TMPIT-like protein CCDC-167 PF15188.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 4.1 7.8 17.9 0.56 10.6 5.5 2.2 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF724 PF05266.14 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 5.1 6.9 17.2 2.8 7.7 4.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Prefoldin PF02996.17 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 5.3 7.0 18.7 1.7 8.6 3.1 3.0 1 1 2 3 3 3 0 Prefoldin subunit Baculo_11_kDa PF06143.11 NODE_44134_length_451_cov_107.492788_g36417_i0reverse_frame_2 - 0.27 10.9 3.7 0.15 11.7 0.9 2.0 2 1 0 2 2 2 0 Baculovirus 11 kDa family Gon7 PF08738.10 NODE_44120_length_451_cov_254.375000_g36404_i0reverse_frame_3 - 0.12 12.4 2.2 0.83 9.8 0.1 2.1 2 0 0 2 2 2 0 Gon7 family Fic_N PF13784.6 NODE_44120_length_451_cov_254.375000_g36404_i0reverse_frame_2 - 0.11 12.5 0.1 0.28 11.2 0.1 1.7 1 1 0 1 1 1 0 Fic/DOC family N-terminal DUF2070 PF09843.9 NODE_44120_length_451_cov_254.375000_g36404_i0forward_frame_3 - 0.71 8.1 7.1 0.79 7.9 7.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) IF4E PF01652.18 NODE_44116_length_451_cov_341.259615_g36400_i0forward_frame_2 - 4.9e-18 65.4 0.0 6.8e-18 65.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E Spuma_A9PTase PF03539.14 NODE_44105_length_452_cov_1.822542_g36390_i0reverse_frame_2 - 0.012 15.7 0.1 0.014 15.5 0.1 1.3 1 0 0 1 1 1 0 Spumavirus aspartic protease (A9) nsp7 PF08716.10 NODE_44105_length_452_cov_1.822542_g36390_i0forward_frame_3 - 0.047 14.3 0.1 0.12 13.0 0.1 1.6 1 0 0 1 1 1 0 nsp7 replicase PEP-utilizers_C PF02896.18 NODE_44103_length_452_cov_1.935252_g36388_i0reverse_frame_2 - 2.2e-17 63.1 0.0 2.4e-17 63.0 0.0 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain Rhodopsin_N PF10413.9 NODE_44099_length_452_cov_2.330935_g36384_i0reverse_frame_3 - 0.063 13.1 0.0 0.4 10.5 0.1 2.0 2 0 0 2 2 2 0 Amino terminal of the G-protein receptor rhodopsin YafO_toxin PF13957.6 NODE_44095_length_452_cov_2.731415_g36380_i0reverse_frame_3 - 0.11 12.5 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system APOBEC1 PF18769.1 NODE_44092_length_452_cov_3.134293_g36377_i0reverse_frame_3 - 0.15 12.3 3.4 0.57 10.5 0.7 2.1 2 0 0 2 2 2 0 APOBEC1 TcpS PF17456.2 NODE_44092_length_452_cov_3.134293_g36377_i0forward_frame_2 - 0.0023 18.0 0.8 0.003 17.6 0.3 1.4 1 1 0 1 1 1 1 Toxin-coregulated pilus protein S Phage_T4_Gp30_7 PF06919.11 NODE_44091_length_452_cov_3.597122_g36376_i0forward_frame_3 - 0.067 13.3 0.2 0.093 12.9 0.2 1.2 1 0 0 1 1 1 0 Phage Gp30.7 protein Glycoprot_B_PH2 PF17417.2 NODE_44091_length_452_cov_3.597122_g36376_i0forward_frame_3 - 0.14 12.5 2.1 0.3 11.5 0.4 2.0 2 0 0 2 2 2 0 Herpesvirus Glycoprotein B PH-like domain Mon1 PF03164.14 NODE_44091_length_452_cov_3.597122_g36376_i0forward_frame_2 - 5.3e-09 35.6 2.7 6.1e-09 35.4 2.7 1.0 1 0 0 1 1 1 1 Trafficking protein Mon1 DUF5539 PF17693.1 NODE_44086_length_452_cov_34.908873_g36371_i0reverse_frame_3 - 0.22 11.1 4.3 0.3 10.7 4.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5539) RNA_pol_Rpc4 PF05132.14 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 0.016 15.6 5.9 0.017 15.5 5.9 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 RNA_polI_A34 PF08208.11 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 0.17 12.0 22.0 0.22 11.6 22.0 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 FAM176 PF14851.6 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 0.42 10.3 4.9 0.58 9.8 4.9 1.2 1 0 0 1 1 1 0 FAM176 family Neur_chan_memb PF02932.16 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 0.67 10.0 2.2 0.67 10.0 2.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region TFIIF_alpha PF05793.12 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 1.4 7.4 24.6 1.8 7.1 24.6 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Coilin_N PF15862.5 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 1.4 8.7 14.0 2.3 8.0 14.0 1.3 1 0 0 1 1 1 0 Coilin N-terminus CLN3 PF02487.17 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 3.2 6.7 3.5 3.7 6.5 3.5 1.1 1 0 0 1 1 1 0 CLN3 protein NPR3 PF03666.13 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 4.3 6.0 11.9 5.4 5.7 11.9 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Spt20 PF12090.8 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 5.5 6.5 12.7 7.2 6.2 12.7 1.1 1 0 0 1 1 1 0 Spt20 family Connexin PF00029.19 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 9.5 5.9 13.3 12 5.6 13.3 1.2 1 0 0 1 1 1 0 Connexin DUF2828 PF11443.8 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_2 - 0.044 11.9 6.3 0.049 11.7 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) V_ATPase_I PF01496.19 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_2 - 0.049 11.6 1.5 0.058 11.3 1.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Presenilin PF01080.17 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_2 - 0.77 8.5 2.1 0.81 8.4 2.1 1.1 1 0 0 1 1 1 0 Presenilin Coilin_N PF15862.5 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_2 - 8.5 6.2 16.9 14 5.5 16.9 1.2 1 0 0 1 1 1 0 Coilin N-terminus GRP PF07172.11 NODE_44084_length_452_cov_48.112710_g36369_i0reverse_frame_3 - 5.3 7.8 13.0 1.9 9.2 5.9 2.2 2 0 0 2 2 2 0 Glycine rich protein family Hamartin PF04388.12 NODE_44084_length_452_cov_48.112710_g36369_i0reverse_frame_2 - 2.6 6.6 11.7 3 6.4 11.7 1.2 1 0 0 1 1 1 0 Hamartin protein P22_AR_C PF10548.9 NODE_44080_length_452_cov_61.402878_g36365_i0forward_frame_3 - 0.012 15.8 1.3 2.2 8.5 0.0 3.3 4 0 0 4 4 4 0 P22AR C-terminal domain Ribosomal_L21p PF00829.21 NODE_44072_length_452_cov_95.011990_g36357_i0forward_frame_2 - 8.7e-14 51.6 0.3 1.3e-13 51.1 0.3 1.1 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein DUF3425 PF11905.8 NODE_44070_length_452_cov_102.347722_g36355_i0reverse_frame_2 - 0.076 13.0 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) UPF0767 PF15990.5 NODE_44069_length_452_cov_108.539568_g36354_i0forward_frame_2 - 2.8 8.1 6.7 6.8 6.9 0.3 2.3 2 0 0 2 2 2 0 UPF0767 family Sde2_N_Ubi PF13019.6 NODE_44062_length_452_cov_143.892086_g36347_i0forward_frame_3 - 3.9 7.3 6.2 0.17 11.7 0.3 1.7 2 0 0 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain DUF1499 PF07386.11 NODE_44057_length_452_cov_296.767386_g36342_i0reverse_frame_3 - 9.4e-11 42.3 0.0 1.2e-10 41.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) DUF2997 PF11211.8 NODE_44057_length_452_cov_296.767386_g36342_i0reverse_frame_3 - 0.051 13.4 0.1 0.094 12.5 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) NAGPA PF09992.9 NODE_44057_length_452_cov_296.767386_g36342_i0reverse_frame_3 - 0.083 13.1 0.1 0.093 12.9 0.1 1.2 1 0 0 1 1 1 0 Phosphodiester glycosidase PGM_PMM_IV PF00408.20 NODE_44057_length_452_cov_296.767386_g36342_i0reverse_frame_3 - 0.16 12.1 0.0 0.3 11.3 0.0 1.4 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, C-terminal domain KorB_C PF06613.11 NODE_44057_length_452_cov_296.767386_g36342_i0reverse_frame_2 - 0.032 14.2 0.3 0.063 13.3 0.3 1.5 1 0 0 1 1 1 0 KorB C-terminal beta-barrel domain zf-BED PF02892.15 NODE_44057_length_452_cov_296.767386_g36342_i0reverse_frame_2 - 0.076 13.0 0.3 0.15 12.1 0.3 1.4 1 0 0 1 1 1 0 BED zinc finger IGFL PF14653.6 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_3 - 0.77 9.8 12.6 1.3 9.1 1.0 2.5 2 1 1 3 3 3 0 Insulin growth factor-like family DUF3626 PF12294.8 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_3 - 1.1 8.2 4.9 9 5.3 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3626) ATP_Ca_trans_C PF12424.8 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_3 - 9.8 6.7 7.6 29 5.2 0.8 2.4 2 0 0 2 2 2 0 Plasma membrane calcium transporter ATPase C terminal SP_C-Propep PF08999.10 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_2 - 0.25 11.2 3.3 1.5 8.6 0.5 2.7 3 0 0 3 3 3 0 Surfactant protein C, N terminal propeptide FERM_M PF00373.18 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_2 - 2.3 8.7 4.5 20 5.6 0.5 2.1 1 1 1 2 2 2 0 FERM central domain BTAD PF03704.17 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 0.08 13.4 7.3 1.9 8.9 1.4 2.1 1 1 1 2 2 2 0 Bacterial transcriptional activator domain DUF29 PF01724.16 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 0.15 12.2 1.2 9.6 6.4 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function DUF29 AC_N PF16214.5 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 2.1 7.4 14.7 4.1 6.4 11.6 1.9 1 1 1 2 2 2 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF3018 PF11455.8 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 3.3 7.7 13.3 9.5 6.2 1.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3018) GIT_SHD PF08518.11 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 6.5 6.5 7.9 20 4.9 1.0 2.4 2 0 0 2 2 2 0 Spa2 homology domain (SHD) of GIT BORCS7 PF16088.5 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.00087 19.5 1.2 1 9.7 0.1 2.2 2 0 0 2 2 2 2 BLOC-1-related complex sub-unit 7 SRCR PF00530.18 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.0012 19.2 4.8 0.49 10.9 0.5 2.2 1 1 1 2 2 2 2 Scavenger receptor cysteine-rich domain FUSC PF04632.12 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.0063 15.1 3.6 0.006 15.2 3.6 1.1 1 0 0 1 1 1 1 Fusaric acid resistance protein family bZIP_1 PF00170.21 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.0094 16.0 5.5 0.59 10.3 0.4 2.8 2 1 0 3 3 3 2 bZIP transcription factor GAS PF13851.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.021 14.1 10.2 0.4 10.0 5.4 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding ADAM_CR_2 PF17771.1 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.027 15.0 2.4 3.6 8.2 0.1 2.2 2 0 0 2 2 2 0 ADAM cysteine-rich domain Rootletin PF15035.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.028 14.4 10.3 0.84 9.6 6.2 2.3 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion Ubiquitin_5 PF18037.1 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.031 14.6 1.8 6.3 7.2 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-like domain DUF4472 PF14739.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.044 14.5 11.3 0.15 12.8 3.2 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4472) BRCT_3 PF18428.1 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.085 12.9 1.1 12 6.1 0.1 2.1 1 1 1 2 2 2 0 BRCA1 C Terminus (BRCT) domain F_actin_bind PF08919.10 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.11 12.6 9.2 0.78 9.9 6.5 2.1 1 1 1 2 2 2 0 F-actin binding Fez1 PF06818.15 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.15 12.5 13.1 0.3 11.5 13.1 1.5 1 1 0 1 1 1 0 Fez1 Spc24 PF08286.11 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.2 11.9 11.5 0.6 10.4 4.0 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 TSC22 PF01166.18 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.21 11.9 3.8 16 5.9 0.3 3.2 1 1 0 2 2 2 0 TSC-22/dip/bun family YabA PF06156.13 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.23 12.1 6.5 2.2 8.9 2.3 2.2 1 1 1 2 2 2 0 Initiation control protein YabA DUF1640 PF07798.11 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.24 11.4 4.6 4 7.4 3.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) Golgin_A5 PF09787.9 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.32 10.4 11.0 0.41 10.1 11.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 AATF-Che1 PF13339.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.39 11.4 9.8 6.2 7.5 5.4 2.1 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor NCA2 PF08637.10 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.55 9.4 2.5 0.68 9.0 2.5 1.2 1 0 0 1 1 1 0 ATP synthase regulation protein NCA2 GrpE PF01025.19 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.57 9.8 7.5 1.9 8.1 2.3 2.2 1 1 1 2 2 2 0 GrpE ABC_tran_CTD PF16326.5 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.8 10.0 12.0 4.4 7.6 2.5 2.2 1 1 1 2 2 2 0 ABC transporter C-terminal domain AAA_lid_9 PF17871.1 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.81 9.6 8.8 4.6 7.2 1.3 2.1 2 0 0 2 2 2 0 AAA lid domain ADIP PF11559.8 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 1 9.5 9.9 5.2 7.1 4.7 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DUF2615 PF11027.8 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 1.6 8.9 5.1 16 5.7 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2615) SlyX PF04102.12 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 1.8 9.3 6.3 4.6 7.9 1.0 2.6 1 1 2 3 3 3 0 SlyX Phage_GPO PF05929.11 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 2.1 7.9 7.7 6.6 6.3 7.7 1.8 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Uso1_p115_C PF04871.13 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 2.1 8.7 18.5 2.3e+02 2.1 18.5 2.3 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF3584 PF12128.8 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 2.1 5.7 14.5 2.3 5.6 14.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_11 PF13086.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 2.9 7.6 10.5 8.5 6.1 10.5 1.6 1 1 0 1 1 1 0 AAA domain Paralemmin PF03285.15 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 3.1 7.3 12.6 4.7 6.7 3.2 2.0 1 1 1 2 2 2 0 Paralemmin DivIC PF04977.15 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 4.6 7.1 6.7 3.9 7.3 0.4 2.6 2 1 1 3 3 3 0 Septum formation initiator WXG100 PF06013.12 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 8.2 6.7 11.1 3.5 7.9 0.6 2.9 2 1 1 3 3 3 0 Proteins of 100 residues with WXG Hydrophobin_2 PF06766.11 NODE_44055_length_452_cov_399.364508_g36340_i0forward_frame_2 - 0.031 14.2 0.2 0.058 13.3 0.1 1.6 1 1 0 1 1 1 0 Fungal hydrophobin ISP1_C PF18161.1 NODE_44045_length_453_cov_1.555024_g36332_i0reverse_frame_2 - 0.081 12.9 0.0 0.26 11.3 0.0 1.8 2 0 0 2 2 2 0 ISP1 C-terminal ISP3_C PF18045.1 NODE_44045_length_453_cov_1.555024_g36332_i0reverse_frame_2 - 0.17 11.8 0.0 0.85 9.5 0.0 1.9 2 0 0 2 2 2 0 ISP3 C-terminal SH3_11 PF18103.1 NODE_44043_length_453_cov_2.035885_g36330_i0forward_frame_2 - 0.0061 16.7 0.9 0.011 15.9 0.9 1.4 1 0 0 1 1 1 1 Retroviral integrase C-terminal SH3 domain RE_ScaI PF09569.10 NODE_44040_length_453_cov_2.514354_g36327_i0reverse_frame_2 - 0.056 13.2 0.1 0.077 12.7 0.1 1.2 1 0 0 1 1 1 0 ScaI restriction endonuclease V_ATPase_I PF01496.19 NODE_44038_length_453_cov_2.614833_g36325_i0reverse_frame_2 - 1.5e-07 29.8 0.1 1.7e-07 29.6 0.1 1.1 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF4342 PF14242.6 NODE_44038_length_453_cov_2.614833_g36325_i0reverse_frame_2 - 0.041 13.9 0.3 0.096 12.7 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4342) YbaJ PF10757.9 NODE_44033_length_453_cov_2.925837_g36320_i0reverse_frame_3 - 4.6e-11 43.3 0.2 6.4e-11 42.8 0.2 1.2 1 0 0 1 1 1 1 Biofilm formation regulator YbaJ Pepdidase_M14_N PF18027.1 NODE_44029_length_453_cov_3.944976_g36316_i0reverse_frame_3 - 6.8e-07 29.6 4.2 9.4e-07 29.2 4.2 1.1 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain Exotox-A_bind PF09101.10 NODE_44025_length_453_cov_6.074163_g36312_i0reverse_frame_3 - 0.0068 15.8 0.0 0.0078 15.6 0.0 1.1 1 0 0 1 1 1 1 Exotoxin A binding DUF5509 PF17625.2 NODE_44021_length_453_cov_43.205742_g36308_i0forward_frame_3 - 0.0062 15.7 1.3 0.0062 15.7 1.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5509) Izumo-Ig PF16706.5 NODE_44019_length_453_cov_57.181818_g36306_i0reverse_frame_3 - 0.093 12.8 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain Fn3-like PF14310.6 NODE_44017_length_453_cov_62.715311_g36304_i0forward_frame_3 - 0.0006 19.9 0.0 0.00092 19.3 0.0 1.3 1 0 0 1 1 1 1 Fibronectin type III-like domain DUF570 PF04489.13 NODE_44015_length_453_cov_64.839713_g35342_i1reverse_frame_2 - 0.03 13.0 2.2 0.038 12.6 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF570) MFS_1 PF07690.16 NODE_44015_length_453_cov_64.839713_g35342_i1forward_frame_3 - 2.8e-05 23.2 1.8 3.7e-05 22.8 1.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_44015_length_453_cov_64.839713_g35342_i1forward_frame_3 - 0.02 13.7 6.8 0.027 13.4 6.8 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter DUF3278 PF11683.8 NODE_44015_length_453_cov_64.839713_g35342_i1forward_frame_3 - 0.057 13.5 3.1 0.12 12.4 1.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3278) Insulin_TMD PF17870.1 NODE_44015_length_453_cov_64.839713_g35342_i1forward_frame_3 - 0.25 11.5 3.1 4.6 7.4 0.0 2.4 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment RCC1 PF00415.18 NODE_44014_length_453_cov_76.775120_g36302_i0forward_frame_3 - 5.4e-24 84.6 0.0 5e-13 49.5 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_44014_length_453_cov_76.775120_g36302_i0forward_frame_3 - 7.9e-12 44.6 1.7 1.9e-09 37.0 0.3 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat TPR_7 PF13176.6 NODE_44012_length_453_cov_77.401914_g36300_i0forward_frame_3 - 0.4 10.8 2.3 38 4.6 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat FKBP_C PF00254.28 NODE_44011_length_453_cov_77.600478_g36299_i0forward_frame_2 - 3.1e-33 113.9 0.0 4.7e-33 113.4 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Sh_2 PF17512.2 NODE_44009_length_453_cov_83.102871_g36297_i0forward_frame_3 - 0.0091 15.8 0.4 0.011 15.5 0.4 1.1 1 0 0 1 1 1 1 Metapneumovirus Small hydrophobic protein ERGIC_N PF13850.6 NODE_44009_length_453_cov_83.102871_g36297_i0forward_frame_3 - 0.0097 16.2 0.1 0.014 15.8 0.1 1.3 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF1800 PF08811.11 NODE_44003_length_453_cov_88.234450_g36291_i0forward_frame_3 - 4.3e-16 59.0 0.5 5.1e-16 58.7 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1800) NYN PF01936.18 NODE_44001_length_453_cov_89.016746_g36289_i0reverse_frame_2 - 0.0029 18.1 0.0 0.0046 17.4 0.0 1.3 1 0 0 1 1 1 1 NYN domain CDC45 PF02724.14 NODE_43993_length_453_cov_106.466507_g36281_i0forward_frame_2 - 1.1 7.4 4.9 1.1 7.5 4.9 1.1 1 0 0 1 1 1 0 CDC45-like protein Baculo_PP31 PF05311.11 NODE_43993_length_453_cov_106.466507_g36281_i0forward_frame_2 - 2 7.9 4.5 2.5 7.5 4.5 1.1 1 0 0 1 1 1 0 Baculovirus 33KDa late protein (PP31) CDC27 PF09507.10 NODE_43993_length_453_cov_106.466507_g36281_i0forward_frame_2 - 2.7 7.3 17.6 3.8 6.8 17.6 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 DUF737 PF05300.11 NODE_43993_length_453_cov_106.466507_g36281_i0forward_frame_2 - 3.9 7.8 14.1 4.9 7.4 14.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) PRCC PF10253.9 NODE_43993_length_453_cov_106.466507_g36281_i0forward_frame_2 - 5.5 7.7 16.4 7.1 7.4 16.4 1.1 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting SRP-alpha_N PF04086.13 NODE_43993_length_453_cov_106.466507_g36281_i0forward_frame_2 - 8.4 6.2 13.6 10 5.9 13.6 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Zip PF02535.22 NODE_43990_length_453_cov_117.755981_g36278_i0reverse_frame_3 - 0.35 10.0 1.6 0.44 9.7 1.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter MIG-14_Wnt-bd PF06664.12 NODE_43989_length_453_cov_120.071770_g36277_i0reverse_frame_3 - 0.028 13.7 0.1 0.033 13.4 0.1 1.1 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion KleE PF17394.2 NODE_43989_length_453_cov_120.071770_g36277_i0reverse_frame_3 - 0.04 14.1 0.2 0.75 10.0 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized KleE stable inheritance protein DUF3623 PF12291.8 NODE_43989_length_453_cov_120.071770_g36277_i0reverse_frame_3 - 0.066 12.4 0.1 0.085 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3623) Imm19 PF15563.6 NODE_43989_length_453_cov_120.071770_g36277_i0reverse_frame_2 - 0.053 13.0 0.0 0.065 12.7 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 19 COPI_assoc PF08507.10 NODE_43989_length_453_cov_120.071770_g36277_i0forward_frame_2 - 2.2e-07 31.0 8.3 3e-07 30.5 8.3 1.2 1 0 0 1 1 1 1 COPI associated protein OppC_N PF12911.7 NODE_43989_length_453_cov_120.071770_g36277_i0forward_frame_2 - 1.2 9.2 3.5 4.5 7.3 0.4 2.4 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C Tail_spike_N PF18668.1 NODE_43988_length_453_cov_132.114833_g36276_i0forward_frame_2 - 0.018 14.9 0.0 0.041 13.8 0.0 1.5 1 0 0 1 1 1 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain DUF1180 PF06679.12 NODE_43988_length_453_cov_132.114833_g36276_i0forward_frame_2 - 0.043 14.2 0.9 0.056 13.9 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) FNIP_N PF14636.6 NODE_43988_length_453_cov_132.114833_g36276_i0forward_frame_2 - 0.39 11.7 5.9 0.56 11.2 5.9 1.3 1 0 0 1 1 1 0 Folliculin-interacting protein N-terminus Protamine_P2 PF00841.19 NODE_43986_length_453_cov_143.741627_g36274_i0reverse_frame_3 - 0.18 12.3 11.5 0.31 11.5 4.7 2.2 2 0 0 2 2 2 0 Sperm histone P2 DUF3365 PF11845.8 NODE_43986_length_453_cov_143.741627_g36274_i0forward_frame_2 - 0.18 12.1 0.1 0.22 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3365) RPN6_N PF18055.1 NODE_43981_length_453_cov_174.217703_g36269_i0reverse_frame_3 - 0.12 12.8 0.1 0.17 12.2 0.1 1.3 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN6 N-terminal domain Inhibitor_I42 PF09394.10 ORF99806 - 1.2e-13 51.3 0.2 2.3e-13 50.4 0.2 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 DUF3613 PF12266.8 ORF99749 - 0.044 13.6 0.2 0.074 12.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3613) Img2 PF05046.14 ORF99590 - 1.4e-15 57.3 0.0 1.7e-15 57.0 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) DOMON PF03351.17 ORF99306 - 9.6e-11 42.0 0.0 1.5e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 DOMON domain RasGAP_C PF03836.15 ORF98959 - 0.023 14.9 0.0 0.035 14.2 0.0 1.4 1 1 0 1 1 1 0 RasGAP C-terminus YkyA PF10368.9 ORF98959 - 0.038 13.7 5.4 0.065 12.9 5.3 1.3 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein EST1 PF10374.9 ORF98959 - 0.041 14.5 0.3 0.049 14.3 0.3 1.1 1 0 0 1 1 1 0 Telomerase activating protein Est1 PMEI PF04043.15 ORF98959 - 0.042 14.2 0.7 0.055 13.8 0.7 1.2 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor RmuC PF02646.16 ORF98959 - 0.05 12.7 2.3 0.068 12.3 2.3 1.1 1 0 0 1 1 1 0 RmuC family DUF2229 PF09989.9 ORF98959 - 0.29 10.7 1.5 0.36 10.5 1.5 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) Fis1_TPR_C PF14853.6 ORF97478 - 0.00074 19.5 0.0 0.0012 18.9 0.0 1.2 1 0 0 1 1 1 1 Fis1 C-terminal tetratricopeptide repeat Mito_fiss_reg PF05308.11 ORF97478 - 0.049 13.7 0.6 0.049 13.7 0.6 1.8 2 0 0 2 2 2 0 Mitochondrial fission regulator GcpE PF04551.14 ORF96996 - 0.0032 16.6 0.0 0.0037 16.4 0.0 1.0 1 0 0 1 1 1 1 GcpE protein NIR_SIR PF01077.22 ORF96996 - 0.014 14.9 0.0 0.018 14.6 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain Asparaginase_C PF17763.1 ORF96780 - 9.9e-30 103.1 0.2 1.1e-29 102.9 0.2 1.0 1 0 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain Pex14_N PF04695.13 ORF96780 - 0.1 13.3 0.0 0.17 12.6 0.0 1.3 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF5484 PF17583.2 ORF96402 - 0.059 13.0 0.1 0.12 12.1 0.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5484) DUF226 PF02890.14 ORF96317 - 0.013 15.5 0.6 0.016 15.2 0.6 1.3 1 0 0 1 1 1 0 Borrelia family of unknown function DUF226 FANCI_HD1 PF14679.6 ORF96317 - 0.2 11.6 2.0 0.24 11.4 0.3 1.9 2 0 0 2 2 2 0 FANCI helical domain 1 Metallophos PF00149.28 ORF9412 - 3e-26 93.2 0.1 4e-26 92.8 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF4049 PF13258.6 ORF9412 - 0.011 14.8 0.0 0.013 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4049) Metallophos_2 PF12850.7 ORF9412 - 0.033 14.4 0.0 0.038 14.2 0.0 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Ribosomal_L18 PF17135.4 ORF9412 - 0.057 12.8 0.0 0.073 12.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e DUF5378 PF17349.2 ORF9412 - 0.077 12.3 0.1 0.091 12.1 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5378) GIT_CC PF16559.5 ORF92406 - 0.00031 20.6 1.4 0.0012 18.6 0.5 2.3 2 1 0 2 2 2 1 GIT coiled-coil Rho guanine nucleotide exchange factor TSC22 PF01166.18 ORF92406 - 0.022 15.1 0.9 0.084 13.2 0.9 2.0 1 0 0 1 1 1 0 TSC-22/dip/bun family Streptin-Immun PF11083.8 ORF92406 - 0.034 14.5 4.7 1 9.8 0.7 2.6 2 1 0 2 2 2 0 Lantibiotic streptin immunity protein TMEM192 PF14802.6 ORF92406 - 0.043 12.9 0.8 0.06 12.4 0.8 1.2 1 0 0 1 1 1 0 TMEM192 family bZIP_1 PF00170.21 ORF92406 - 0.57 10.3 4.3 0.25 11.5 0.6 2.3 3 0 0 3 3 3 0 bZIP transcription factor Shugoshin_N PF07558.11 ORF92406 - 5.4 7.0 10.4 3.4 7.6 0.8 3.6 3 1 1 4 4 4 0 Shugoshin N-terminal coiled-coil region TetR_C_8 PF14278.6 ORF91857 - 0.12 12.5 3.2 0.55 10.4 0.2 2.7 2 1 1 3 3 3 0 Transcriptional regulator C-terminal region Ca_bind_SSO6904 PF18249.1 ORF91857 - 0.13 12.6 2.3 0.081 13.3 0.6 1.6 2 0 0 2 2 2 0 Calcium binding protein SSO6904 ALMS_motif PF15309.6 ORF9108 - 0.044 14.2 0.8 0.06 13.8 0.8 1.2 1 0 0 1 1 1 0 ALMS motif Staphostatin_A PF09022.10 ORF87372 - 0.003 17.4 0.1 0.0042 17.0 0.1 1.4 1 0 0 1 1 1 1 Staphostatin A Rhomboid_N PF12122.8 ORF87372 - 0.021 15.0 0.0 0.062 13.5 0.0 1.8 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease FF PF01846.19 ORF87372 - 0.034 14.3 0.0 0.067 13.4 0.0 1.5 1 0 0 1 1 1 0 FF domain PP2C PF00481.21 ORF8713 - 1.3e-31 110.2 0.0 1.5e-31 110.0 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Ribonuc_2-5A PF06479.12 ORF8693 - 0.06 13.5 4.0 0.18 12.0 0.8 2.1 1 1 1 2 2 2 0 Ribonuclease 2-5A Mur_ligase PF01225.25 ORF85844 - 0.16 12.3 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Mur ligase family, catalytic domain DUF2859 PF11072.8 ORF83394 - 0.19 11.5 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) PDEase_I PF00233.19 ORF83356 - 1.6e-43 149.1 1.8 1.8e-43 149.0 1.8 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase MORN PF02493.20 ORF82837 - 1.4e-06 27.9 1.3 3.3e-06 26.7 1.3 1.7 1 0 0 1 1 1 1 MORN repeat DAP10 PF07213.11 ORF82640 - 0.095 12.7 0.3 0.19 11.7 0.3 1.4 1 0 0 1 1 1 0 DAP10 membrane protein Mur_ligase PF01225.25 ORF82130 - 0.16 12.3 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Mur ligase family, catalytic domain GreA_GreB_N PF03449.15 ORF82041 - 0.059 13.5 1.0 0.11 12.6 1.0 1.5 1 0 0 1 1 1 0 Transcription elongation factor, N-terminal DUF932 PF06067.11 ORF82041 - 0.1 12.3 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF932) Mem_trans PF03547.18 ORF81676 - 0.015 13.7 0.1 0.019 13.4 0.1 1.1 1 0 0 1 1 1 0 Membrane transport protein Peptidase_U57 PF05582.12 ORF81676 - 0.093 12.0 3.1 0.098 11.9 3.1 1.1 1 0 0 1 1 1 0 YabG peptidase U57 GatB_N PF02934.15 ORF81676 - 0.34 10.2 6.3 0.44 9.9 6.3 1.1 1 0 0 1 1 1 0 GatB/GatE catalytic domain CBF PF03914.17 ORF81676 - 0.79 9.7 4.9 1.7 8.6 4.2 1.8 1 1 1 2 2 2 0 CBF/Mak21 family Adeno_terminal PF02459.15 ORF8044 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein Ank_2 PF12796.7 ORF80362 - 1.8e-30 105.3 0.0 1.9e-13 50.8 0.0 2.7 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF80362 - 1.1e-22 79.4 0.2 7.5e-05 23.0 0.0 5.1 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF80362 - 7.2e-19 67.6 4.6 8.1e-08 32.4 0.0 3.9 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF80362 - 4.1e-17 62.3 0.2 1.2e-05 25.8 0.0 4.0 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF80362 - 2.4e-12 45.9 0.2 0.17 12.5 0.0 5.2 5 0 0 5 5 5 4 Ankyrin repeat Synapsin_C PF02750.14 ORF80256 - 0.2 11.1 0.0 0.3 10.6 0.0 1.2 1 0 0 1 1 1 0 Synapsin, ATP binding domain RST PF12174.8 ORF80023 - 0.048 13.6 1.6 0.071 13.0 0.5 1.9 2 0 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain LCE PF14672.6 ORF78730 - 0.13 12.9 0.2 0.13 12.9 0.2 1.8 1 1 1 2 2 2 0 Late cornified envelope GWT1 PF06423.12 ORF78176 - 0.052 13.7 0.0 3.8 7.6 0.0 2.5 2 1 0 2 2 2 0 GWT1 MaoC_dehydratas PF01575.19 ORF76879 - 6e-28 96.9 0.0 7.3e-28 96.6 0.0 1.0 1 0 0 1 1 1 1 MaoC like domain zf-RING_13 PF17977.1 ORF76879 - 0.014 15.5 0.3 0.033 14.3 0.3 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Cytokin_check_N PF10407.9 ORF76863 - 1.8e-06 27.8 0.0 4.6e-06 26.5 0.0 1.6 2 0 0 2 2 2 1 Cdc14 phosphatase binding protein N-terminus EB PF01683.18 ORF76747 - 0.013 15.8 10.5 0.23 11.8 7.6 3.1 1 1 2 3 3 3 0 EB module CarbpepA_inh PF02977.15 ORF76747 - 4.4 7.2 13.6 6.6 6.6 6.9 3.2 2 1 0 2 2 2 0 Carboxypeptidase A inhibitor ParBc PF02195.18 ORF73262 - 0.0016 18.7 0.0 0.0025 18.1 0.0 1.3 1 0 0 1 1 1 1 ParB-like nuclease domain Cmc1 PF08583.10 ORF73262 - 0.089 12.8 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like HMG_box PF00505.19 ORF71445 - 6.3e-17 61.8 5.9 1.2e-16 60.9 5.9 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF71445 - 2.8e-12 47.1 4.0 5.5e-12 46.1 4.0 1.5 1 0 0 1 1 1 1 HMG-box domain Ofd1_CTDD PF10637.9 ORF71445 - 0.014 14.8 3.9 0.13 11.6 2.4 2.0 1 1 1 2 2 2 0 Oxoglutarate and iron-dependent oxygenase degradation C-term # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks148.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks148.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks148.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks148.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:57:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ank_2 PF12796.7 ORF70451 - 1.3e-09 38.5 0.0 2.1e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF70451 - 4e-07 30.2 0.3 0.0037 17.6 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF70451 - 3.9e-06 27.3 0.1 0.019 15.6 0.0 2.9 2 1 0 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF70451 - 5.6e-06 26.3 0.1 0.015 15.7 0.0 3.0 3 1 1 4 4 4 2 Ankyrin repeat Adeno_terminal PF02459.15 ORF7019 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein eIF_4G1 PF12152.8 ORF68990 - 0.00076 19.6 0.1 0.0018 18.4 0.1 1.7 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 4G1 DUF2956 PF11169.8 ORF68834 - 0.02 15.1 1.0 0.036 14.3 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2956) F5_F8_type_C PF00754.25 ORF68093 - 0.049 13.8 0.0 0.074 13.2 0.0 1.2 1 0 0 1 1 1 0 F5/8 type C domain PIG-F PF06699.11 ORF67918 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F Ank_4 PF13637.6 ORF66333 - 7.2e-13 48.8 3.8 1.6e-07 31.7 0.4 2.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF66333 - 3.7e-10 39.9 1.8 7.9e-07 29.2 0.3 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF66333 - 5.7e-08 33.3 0.0 8.2e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF66333 - 1.1e-05 25.4 0.2 0.19 12.4 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 ORF66333 - 0.00017 21.9 1.2 0.51 10.9 0.1 2.6 2 0 0 2 2 2 2 Ankyrin repeat DUF760 PF05542.11 ORF66159 - 0.00017 21.9 0.1 0.052 13.9 0.2 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF760) DUF4936 PF16290.5 ORF66159 - 0.16 12.7 2.0 5 7.9 0.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4936) YEATS PF03366.16 ORF65842 - 1.2e-18 66.9 1.3 1.7e-18 66.3 1.3 1.2 1 0 0 1 1 1 1 YEATS family Ank_2 PF12796.7 ORF65241 - 5.5e-08 33.3 0.0 2.2e-07 31.4 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF65241 - 3.2e-05 24.4 0.3 0.00019 21.9 0.0 2.3 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF65241 - 0.00022 21.5 0.4 0.0011 19.2 0.0 2.3 2 2 1 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF65241 - 0.00023 21.5 1.2 0.00073 19.9 0.0 2.5 4 1 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF65241 - 0.00055 20.2 0.0 0.046 14.3 0.0 3.5 4 0 0 4 4 4 1 Ankyrin repeat Cytochrome_P460 PF16694.5 ORF65241 - 0.13 12.6 2.3 0.21 11.9 2.3 1.3 1 0 0 1 1 1 0 Cytochrome P460 TerD PF02342.18 ORF645 - 0.03 13.8 0.1 0.035 13.6 0.1 1.1 1 0 0 1 1 1 0 TerD domain RasGAP_C PF03836.15 ORF62925 - 0.023 14.9 0.0 0.035 14.2 0.0 1.4 1 1 0 1 1 1 0 RasGAP C-terminus YkyA PF10368.9 ORF62925 - 0.038 13.7 5.4 0.065 12.9 5.3 1.3 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein EST1 PF10374.9 ORF62925 - 0.041 14.5 0.3 0.049 14.3 0.3 1.1 1 0 0 1 1 1 0 Telomerase activating protein Est1 PMEI PF04043.15 ORF62925 - 0.042 14.2 0.7 0.055 13.8 0.7 1.2 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor RmuC PF02646.16 ORF62925 - 0.05 12.7 2.3 0.068 12.3 2.3 1.1 1 0 0 1 1 1 0 RmuC family DUF2229 PF09989.9 ORF62925 - 0.29 10.7 1.5 0.36 10.5 1.5 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) ADH_zinc_N PF00107.26 ORF62591 - 6.7e-11 42.3 0.0 8.8e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF62591 - 5.6e-08 32.5 0.0 6.7e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF62591 - 0.0023 19.0 0.0 0.0034 18.4 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase FAM183 PF14886.6 ORF62077 - 0.045 14.5 0.0 0.073 13.8 0.0 1.4 1 0 0 1 1 1 0 FAM183A and FAM183B related Ribosomal_L11 PF00298.19 ORF61420 - 0.11 13.1 0.7 1 9.9 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein L11, RNA binding domain Adeno_terminal PF02459.15 ORF60491 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein Adeno_terminal PF02459.15 ORF60157 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein eIF-5a PF01287.20 ORF5725 - 7.3e-14 51.6 0.3 1e-13 51.1 0.3 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 ORF5725 - 0.0017 18.3 0.1 0.0029 17.6 0.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain DUF4026 PF13218.6 ORF5725 - 0.053 12.5 0.0 0.066 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4026) DUF1894 PF08979.11 ORF5725 - 0.13 12.6 0.5 0.32 11.4 0.2 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF1894) Peptidase_S9 PF00326.21 ORF57205 - 1.1e-27 96.9 0.1 1.2e-27 96.8 0.1 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF57205 - 0.0046 16.3 0.1 1 8.6 0.0 2.1 1 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF57205 - 0.16 12.1 0.2 0.32 11.1 0.1 1.5 1 1 1 2 2 2 0 TAP-like protein Rhodanese PF00581.20 ORF56176 - 1e-10 42.1 0.0 1.4e-10 41.7 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain Adeno_terminal PF02459.15 ORF5603 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein PapG_C PF03628.13 ORF56013 - 0.13 12.2 1.7 11 5.9 0.1 2.2 2 0 0 2 2 2 0 PapG chaperone-binding domain TBP PF00352.21 ORF54912 - 1.5e-34 117.8 1.0 1.3e-24 85.9 0.1 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 ORF54912 - 0.019 15.1 0.0 0.038 14.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3378) Ras PF00071.22 ORF52911 - 2.6e-38 131.2 0.3 3e-38 131.0 0.3 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF52911 - 1.3e-16 60.9 0.2 2.5e-16 60.0 0.1 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF52911 - 5.7e-07 29.1 0.1 7.8e-07 28.7 0.1 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF52911 - 0.01 15.4 0.0 0.018 14.6 0.0 1.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain DUF1863 PF08937.11 ORF52911 - 0.12 12.7 0.0 0.19 12.1 0.0 1.4 1 1 0 1 1 1 0 MTH538 TIR-like domain (DUF1863) Ctr PF04145.15 ORF52325 - 2.7e-13 50.8 22.0 1.7e-07 32.0 16.2 2.1 1 1 1 2 2 2 2 Ctr copper transporter family DUF2070 PF09843.9 ORF52325 - 0.54 8.5 6.7 0.59 8.4 6.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Fer2 PF00111.27 ORF51786 - 0.2 11.7 0.3 0.2 11.7 0.3 2.2 1 1 1 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain AC_N PF16214.5 ORF51786 - 0.41 9.7 8.3 0.64 9.1 8.3 1.3 1 1 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Enterotoxin_HS1 PF08090.11 ORF51786 - 8.3 6.5 8.4 1.2 9.2 2.9 2.4 2 1 0 2 2 2 0 Heat stable E.coli enterotoxin 1 MaoC_dehydratas PF01575.19 ORF51397 - 1.3e-27 95.8 0.0 1.7e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 MaoC like domain Spc24 PF08286.11 ORF51269 - 4 7.7 18.5 21 5.4 4.4 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 BST2 PF16716.5 ORF51269 - 9.1 6.9 17.3 0.34 11.5 9.9 2.1 1 1 0 2 2 2 0 Bone marrow stromal antigen 2 Acyl_transf_3 PF01757.22 ORF49761 - 0.025 13.6 2.2 0.031 13.4 2.2 1.1 1 0 0 1 1 1 0 Acyltransferase family DUF418 PF04235.12 ORF49761 - 0.11 12.4 3.0 0.13 12.2 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF418) Mito_carr PF00153.27 ORF49610 - 1.8e-13 50.2 1.3 2.4e-13 49.8 0.3 1.6 2 0 0 2 2 2 1 Mitochondrial carrier protein Wzz PF02706.15 ORF49610 - 0.013 15.8 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 0 Chain length determinant protein CitMHS PF03600.16 ORF48972 - 0.065 12.4 0.1 0.065 12.4 0.1 1.1 1 0 0 1 1 1 0 Citrate transporter WD40 PF00400.32 ORF48902 - 4.3e-06 27.4 1.0 0.00026 21.7 0.0 3.5 3 1 1 4 4 4 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF48902 - 2.9e-05 24.3 0.0 0.34 11.2 0.0 2.2 1 1 0 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF48902 - 0.06 12.0 0.0 1.3 7.6 0.0 2.0 1 1 0 2 2 2 0 Nucleoporin Nup120/160 TssO PF17561.2 ORF48205 - 2.7 8.1 5.3 0.19 11.8 0.5 1.5 2 0 0 2 2 2 0 Type VI secretion system, TssO Adeno_terminal PF02459.15 ORF47779 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein NAD_binding_10 PF13460.6 ORF47667 - 1.8e-15 57.3 0.0 2.4e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Adeno_terminal PF02459.15 ORF46748 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein zf-LITAF-like PF10601.9 ORF46635 - 0.0012 19.1 6.0 0.0017 18.6 6.0 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Bul1_C PF04426.12 ORF46347 - 0.071 12.5 3.6 0.085 12.2 3.6 1.2 1 0 0 1 1 1 0 Bul1 C terminus Ank_4 PF13637.6 ORF44426 - 5.5e-07 30.0 0.0 0.0021 18.6 0.0 2.7 2 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF44426 - 1.7e-06 28.2 0.0 1.3e-05 25.4 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF44426 - 2.3e-05 24.9 0.0 0.00012 22.6 0.0 2.0 2 1 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF44426 - 0.00027 21.1 0.3 0.21 12.3 0.0 3.3 3 0 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF44426 - 0.0028 18.0 0.6 0.36 11.3 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat PIG-F PF06699.11 ORF43739 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F DUF1489 PF07370.11 ORF42045 - 0.079 12.7 0.3 0.11 12.2 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1489) DUF386 PF04074.12 ORF41108 - 7.7e-45 152.4 0.0 8.5e-45 152.3 0.0 1.0 1 0 0 1 1 1 1 YhcH/YjgK/YiaL Cupin_2 PF07883.11 ORF41108 - 0.00062 19.4 0.0 0.0016 18.2 0.0 1.6 1 0 0 1 1 1 1 Cupin domain Ribosomal_L30 PF00327.20 ORF4032 - 3.1e-12 46.2 2.9 3.1e-12 46.2 2.9 1.7 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e DUF1086 PF06461.11 ORF39871 - 0.091 12.6 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1086) NYN PF01936.18 ORF39551 - 0.0002 21.9 0.0 0.00041 20.8 0.0 1.5 1 1 1 2 2 2 1 NYN domain Synaptobrevin PF00957.21 ORF38931 - 1.7e-15 56.6 0.4 2.6e-15 56.0 0.4 1.3 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 ORF38931 - 0.0019 18.2 0.0 0.003 17.6 0.0 1.4 1 0 0 1 1 1 1 Regulated-SNARE-like domain DUF4349 PF14257.6 ORF38931 - 0.11 11.9 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) PIG-F PF06699.11 ORF38583 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F Bul1_C PF04426.12 ORF36236 - 0.071 12.5 3.6 0.085 12.2 3.6 1.2 1 0 0 1 1 1 0 Bul1 C terminus Bul1_C PF04426.12 ORF36024 - 0.071 12.5 3.6 0.085 12.2 3.6 1.2 1 0 0 1 1 1 0 Bul1 C terminus EB1 PF03271.17 ORF35894 - 3.2e-15 56.1 0.6 6.3e-15 55.1 0.6 1.5 1 0 0 1 1 1 1 EB1-like C-terminal motif Pkinase PF00069.25 ORF3484 - 8.5e-27 94.2 0.7 1.1e-26 93.8 0.7 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF3484 - 9e-16 57.9 0.2 1e-15 57.7 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase PG_binding_2 PF08823.11 ORF3436 - 0.0024 18.2 0.0 0.031 14.6 0.0 2.3 2 0 0 2 2 2 1 Putative peptidoglycan binding domain zf-SAP30 PF13866.6 ORF32478 - 0.047 13.8 0.1 0.085 13.0 0.1 1.4 1 0 0 1 1 1 0 SAP30 zinc-finger NLBH PF05211.12 ORF31926 - 0.0079 15.8 2.7 0.0079 15.8 2.7 1.7 1 1 0 1 1 1 1 Neuraminyllactose-binding hemagglutinin precursor (NLBH) GreA_GreB_N PF03449.15 ORF28496 - 0.059 13.5 1.0 0.11 12.6 1.0 1.5 1 0 0 1 1 1 0 Transcription elongation factor, N-terminal DUF932 PF06067.11 ORF28496 - 0.1 12.3 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF932) PhnG PF06754.12 ORF27824 - 2.2e-52 176.8 3.8 2.4e-52 176.6 3.8 1.0 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnG HSBP1 PF06825.12 ORF27824 - 0.085 12.7 0.0 0.5 10.3 0.0 2.0 2 0 0 2 2 2 0 Heat shock factor binding protein 1 TBP PF00352.21 ORF27717 - 1.5e-34 117.8 1.0 1.3e-24 85.9 0.1 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 ORF27717 - 0.019 15.1 0.0 0.038 14.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3378) ABC_tran PF00005.27 ORF27454 - 1.8e-09 38.2 0.0 2.3e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter PHtD_u1 PF16645.5 ORF26632 - 0.37 11.2 2.8 0.52 10.8 1.3 2.3 2 1 0 2 2 2 0 Unstructured region on Pneumococcal histidine triad protein C2 PF00168.30 ORF25769 - 2.8e-08 34.0 0.0 3.6e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 C2 domain MORN PF02493.20 ORF25749 - 1.4e-06 27.9 1.3 3.3e-06 26.7 1.3 1.7 1 0 0 1 1 1 1 MORN repeat Albumin_I PF08027.11 ORF25402 - 1.6 8.4 8.2 0.39 10.4 0.8 2.8 3 0 0 3 3 3 0 Albumin I chain b Ank_2 PF12796.7 ORF24517 - 5.5e-08 33.3 0.0 2.2e-07 31.4 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF24517 - 3.2e-05 24.4 0.3 0.00019 21.9 0.0 2.3 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF24517 - 0.00022 21.5 0.4 0.0011 19.2 0.0 2.3 2 2 1 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF24517 - 0.00023 21.5 1.2 0.00073 19.9 0.0 2.5 4 1 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF24517 - 0.00055 20.2 0.0 0.046 14.3 0.0 3.5 4 0 0 4 4 4 1 Ankyrin repeat Cytochrome_P460 PF16694.5 ORF24517 - 0.13 12.6 2.3 0.21 11.9 2.3 1.3 1 0 0 1 1 1 0 Cytochrome P460 IFP_35_N PF07334.13 ORF24328 - 0.14 12.2 5.6 0.12 12.5 1.5 2.5 2 1 1 3 3 3 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Spc7 PF08317.11 ORF24328 - 0.73 8.7 11.0 3.5 6.4 2.2 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Fn3_assoc PF13287.6 ORF23183 - 0.0093 16.1 0.0 0.016 15.4 0.0 1.4 1 0 0 1 1 1 1 Fn3 associated CHB_HEX_C_1 PF13290.6 ORF23183 - 0.024 14.6 0.0 0.035 14.1 0.0 1.3 1 0 0 1 1 1 0 Chitobiase/beta-hexosaminidase C-terminal domain LRS4 PF10422.9 ORF22365 - 0.033 13.8 1.9 0.062 12.9 2.0 1.5 1 1 0 1 1 1 0 Monopolin complex subunit LRS4 DUF4602 PF15375.6 ORF19705 - 0.028 14.7 0.1 0.049 14.0 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4602) MaoC_dehydratas PF01575.19 ORF19104 - 1.3e-27 95.8 0.0 1.7e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 MaoC like domain Adeno_terminal PF02459.15 ORF18684 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein TPR_12 PF13424.6 ORF18308 - 0.028 14.7 0.1 17 5.8 0.0 2.9 2 1 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF18308 - 0.081 13.2 1.2 1.9 8.9 0.0 3.2 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF18308 - 0.11 12.6 0.0 7.1 6.9 0.0 2.7 2 1 0 2 2 2 0 Tetratricopeptide repeat HMG_box PF00505.19 ORF18073 - 6.3e-17 61.8 5.9 1.2e-16 60.9 5.9 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF18073 - 2.8e-12 47.1 4.0 5.5e-12 46.1 4.0 1.5 1 0 0 1 1 1 1 HMG-box domain Ofd1_CTDD PF10637.9 ORF18073 - 0.014 14.8 3.9 0.13 11.6 2.4 2.0 1 1 1 2 2 2 0 Oxoglutarate and iron-dependent oxygenase degradation C-term MORN PF02493.20 ORF17914 - 1.6e-19 68.5 29.8 1.6e-05 24.5 1.6 5.7 5 1 0 5 5 5 5 MORN repeat TPR_12 PF13424.6 ORF16209 - 0.028 14.7 0.1 17 5.8 0.0 2.9 2 1 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF16209 - 0.081 13.2 1.2 1.9 8.9 0.0 3.2 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF16209 - 0.11 12.6 0.0 7.1 6.9 0.0 2.7 2 1 0 2 2 2 0 Tetratricopeptide repeat LRS4 PF10422.9 ORF15120 - 0.033 13.8 1.9 0.062 12.9 2.0 1.5 1 1 0 1 1 1 0 Monopolin complex subunit LRS4 KxDL PF10241.9 ORF1467 - 0.07 13.4 2.2 0.14 12.5 2.2 1.6 1 1 0 1 1 1 0 Uncharacterized conserved protein Ank_2 PF12796.7 ORF14486 - 5.5e-08 33.3 0.0 2.2e-07 31.4 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF14486 - 3.2e-05 24.4 0.3 0.00019 21.9 0.0 2.3 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF14486 - 0.00022 21.5 0.4 0.0011 19.2 0.0 2.3 2 2 1 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF14486 - 0.00023 21.5 1.2 0.00073 19.9 0.0 2.5 4 1 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF14486 - 0.00055 20.2 0.0 0.046 14.3 0.0 3.5 4 0 0 4 4 4 1 Ankyrin repeat Cytochrome_P460 PF16694.5 ORF14486 - 0.13 12.6 2.3 0.21 11.9 2.3 1.3 1 0 0 1 1 1 0 Cytochrome P460 NAD_binding_11 PF14833.6 ORF14025 - 1.4e-31 109.2 0.0 1.7e-31 109.0 0.0 1.0 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UDPG_MGDP_dh PF00984.19 ORF14025 - 0.06 13.6 0.0 0.2 11.9 0.0 1.8 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, central domain SM-ATX PF14438.6 ORF14025 - 0.14 12.3 0.0 1.3 9.2 0.0 2.2 1 1 0 1 1 1 0 Ataxin 2 SM domain Adeno_terminal PF02459.15 ORF11288 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein eIF-5a PF01287.20 ORF112555 - 4e-13 49.2 0.3 6.1e-13 48.7 0.3 1.3 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold DUF4026 PF13218.6 ORF112555 - 0.053 12.5 0.0 0.064 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4026) PHAT PF09246.10 ORF111478 - 0.1 12.4 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 PHAT PH PF00169.29 ORF10996 - 0.0018 18.8 0.0 0.0033 17.9 0.0 1.4 1 1 0 1 1 1 1 PH domain Mcp5_PH PF12814.7 ORF10996 - 0.05 13.7 0.0 0.29 11.2 0.0 2.1 1 1 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology PIG-F PF06699.11 ORF109325 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F eIF-5a PF01287.20 ORF108920 - 1.4e-16 60.4 0.3 1.9e-16 59.9 0.3 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 ORF108920 - 1.2e-05 25.2 0.1 2e-05 24.5 0.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain PH PF00169.29 ORF107344 - 0.0018 18.8 0.0 0.0033 17.9 0.0 1.4 1 1 0 1 1 1 1 PH domain Mcp5_PH PF12814.7 ORF107344 - 0.053 13.6 0.0 0.32 11.1 0.0 2.0 1 1 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology DUF4388 PF14332.6 ORF107344 - 0.067 13.5 0.0 0.15 12.4 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4388) Bul1_C PF04426.12 ORF107150 - 0.071 12.5 3.6 0.085 12.2 3.6 1.2 1 0 0 1 1 1 0 Bul1 C terminus Adeno_terminal PF02459.15 ORF10635 - 2 6.7 2.8 2.5 6.4 2.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein CPW_WPC PF09717.10 ORF106228 - 7.9e-12 46.0 5.8 1.3e-09 38.9 5.5 2.4 2 0 0 2 2 2 2 Plasmodium falciparum domain of unknown function (CPW_WPC) CPSF100_C PF13299.6 ORF106171 - 2.6 8.2 7.6 0.75 10.0 4.1 1.7 1 1 1 2 2 2 0 Cleavage and polyadenylation factor 2 C-terminal Tam41_Mmp37 PF09139.11 ORF105978 - 1.8e-41 142.7 1.0 2e-41 142.5 1.0 1.0 1 0 0 1 1 1 1 Phosphatidate cytidylyltransferase, mitochondrial DUF2956 PF11169.8 ORF105951 - 0.02 15.1 1.0 0.036 14.3 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2956) SSXT PF05030.12 ORF105209 - 6.8e-05 22.4 0.4 6.8e-05 22.4 0.4 1.8 2 0 0 2 2 2 1 SSXT protein (N-terminal region) DUF2284 PF10050.9 ORF105209 - 0.018 14.8 0.0 0.036 13.8 0.0 1.5 2 0 0 2 2 2 0 Predicted metal-binding protein (DUF2284) YaaC PF14175.6 ORF105209 - 0.061 12.6 2.2 0.063 12.5 2.2 1.0 1 0 0 1 1 1 0 YaaC-like Protein ATP-synt_C PF00137.21 ORF103700 - 7.9e-13 48.6 11.7 7.9e-13 48.6 11.7 2.2 2 0 0 2 2 2 2 ATP synthase subunit C Cytokin_check_N PF10407.9 ORF103243 - 1.8e-06 27.8 0.0 4.6e-06 26.5 0.0 1.6 2 0 0 2 2 2 1 Cdc14 phosphatase binding protein N-terminus Mur_ligase PF01225.25 ORF103182 - 0.16 12.3 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Mur ligase family, catalytic domain CEND1 PF15677.5 ORF102701 - 0.15 12.6 0.1 1.3 9.6 0.0 1.9 1 1 1 2 2 2 0 Cell cycle exit and neuronal differentiation protein 1 Recep_L_domain PF01030.24 ORF102666 - 0.02 15.0 2.3 1.5 9.0 0.3 2.2 2 0 0 2 2 2 0 Receptor L domain DUF2999 PF11212.8 ORF102666 - 0.033 14.5 0.0 0.08 13.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2999) Myf5 PF12232.8 ORF102666 - 0.077 13.8 2.9 0.13 13.0 2.9 1.4 1 0 0 1 1 1 0 Myogenic determination factor 5 DHHC PF01529.20 ORF102423 - 8.7e-05 22.6 0.4 0.00013 22.1 0.4 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase MTABC_N PF16185.5 ORF102423 - 0.061 12.8 0.7 0.078 12.5 0.7 1.1 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region FAM183 PF14886.6 ORF102111 - 0.045 14.5 0.0 0.073 13.8 0.0 1.4 1 0 0 1 1 1 0 FAM183A and FAM183B related PhoLip_ATPase_C PF16212.5 ORF101901 - 3.9e-41 141.5 9.2 4.3e-41 141.3 9.2 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal EcKinase PF02958.20 ORF101547 - 3.3e-06 26.6 0.0 4.7e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Ecdysteroid kinase APH PF01636.23 ORF101547 - 0.00031 20.8 0.0 0.00043 20.3 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family DUF1679 PF07914.11 ORF101547 - 0.00035 19.5 0.0 0.00042 19.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) His_Phos_2 PF00328.22 ORF101489 - 0.0001 21.8 0.1 0.00011 21.7 0.1 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) ZapC PF07126.12 NODE_44565_length_445_cov_2.321951_g36822_i0forward_frame_1 - 5.5e-53 179.0 0.1 6.2e-53 178.8 0.1 1.0 1 0 0 1 1 1 1 Cell-division protein ZapC CsiV PF10972.8 NODE_44561_length_445_cov_2.568293_g36818_i0reverse_frame_1 - 0.16 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Peptidoglycan-binding protein, CsiV Acetate_kinase PF00871.17 NODE_44561_length_445_cov_2.568293_g36818_i0forward_frame_1 - 3.1e-19 68.9 0.0 4.2e-19 68.5 0.0 1.1 1 0 0 1 1 1 1 Acetokinase family Peptidase_S8 PF00082.22 NODE_44557_length_445_cov_3.000000_g36814_i0reverse_frame_1 - 2.4e-18 66.4 0.3 2.7e-18 66.2 0.3 1.0 1 0 0 1 1 1 1 Subtilase family HTH_Tnp_4 PF13613.6 NODE_44554_length_445_cov_4.970732_g36811_i0forward_frame_1 - 0.0073 16.0 0.1 0.35 10.6 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix of DDE superfamily endonuclease CNV-Replicase_N PF16688.5 NODE_44554_length_445_cov_4.970732_g36811_i0forward_frame_1 - 0.12 12.7 0.0 0.19 12.1 0.0 1.3 1 0 0 1 1 1 0 Replicase polyprotein N-term from Coronavirus nsp1 F-box PF00646.33 NODE_44553_length_445_cov_5.329268_g36810_i0forward_frame_1 - 0.005 16.7 0.5 0.005 16.7 0.5 3.3 3 1 1 4 4 4 1 F-box domain HTH_20 PF12840.7 NODE_44553_length_445_cov_5.329268_g36810_i0forward_frame_1 - 0.25 11.4 1.5 6.5 6.9 0.6 2.9 1 1 1 2 2 2 0 Helix-turn-helix domain SNARE_assoc PF09335.11 NODE_44553_length_445_cov_5.329268_g36810_i0forward_frame_1 - 1.6 9.3 6.1 0.82 10.2 1.5 2.1 1 1 1 2 2 2 0 SNARE associated Golgi protein GBP_repeat PF02526.14 NODE_44550_length_445_cov_41.231707_g36807_i0reverse_frame_1 - 0.11 12.2 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Glycophorin-binding protein TAP35_44 PF07265.11 NODE_44542_length_445_cov_77.363415_g36799_i0reverse_frame_1 - 0.11 12.5 1.4 0.17 11.9 0.4 1.8 1 1 1 2 2 2 0 Tapetum specific protein TAP35/TAP44 DUF4891 PF16232.5 NODE_44515_length_445_cov_553.197561_g19822_i4forward_frame_1 - 0.042 14.4 0.6 0.53 10.8 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4891) Ependymin PF00811.18 NODE_44512_length_445_cov_818.619512_g36772_i0reverse_frame_1 - 0.031 14.6 0.5 0.048 13.9 0.5 1.3 1 0 0 1 1 1 0 Ependymin ADAM17_MPD PF16698.5 NODE_44508_length_445_cov_1167.551220_g36769_i0reverse_frame_1 - 0.041 14.2 0.3 0.11 12.9 0.3 1.6 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 zf-C2H2_2 PF12756.7 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.0066 16.8 1.3 0.37 11.2 2.7 2.2 1 1 1 2 2 2 1 C2H2 type zinc-finger (2 copies) zf-C2H2_9 PF16293.5 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.0084 15.9 0.0 0.0084 15.9 0.0 1.9 2 0 0 2 2 2 1 C2H2 type zinc-finger (1 copy) zf-C2H2_4 PF13894.6 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.011 16.5 9.2 0.34 11.9 0.2 2.6 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.034 14.6 10.4 0.24 11.9 0.1 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zinc_ribbon_4 PF13717.6 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.072 13.0 1.2 5.2 7.1 0.2 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zf_C2H2_ZHX PF18387.1 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.19 11.4 1.4 11 5.7 0.0 2.3 2 0 0 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zinc_ribbon_5 PF13719.6 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.28 11.0 3.7 1.4 8.8 0.5 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Aminotran_3 PF00202.21 NODE_44496_length_446_cov_2.272506_g36759_i0forward_frame_1 - 0.0076 14.9 0.1 0.014 14.0 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class-III PDDEXK_10 PF07788.11 NODE_44488_length_446_cov_2.559611_g36751_i0reverse_frame_1 - 0.078 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Ribosomal_S22 PF08136.11 NODE_44488_length_446_cov_2.559611_g36751_i0reverse_frame_1 - 0.088 13.2 0.5 0.2 12.1 0.0 1.8 2 0 0 2 2 2 0 30S ribosomal protein subunit S22 family DNA_ligase_A_M PF01068.21 NODE_44480_length_446_cov_38.978102_g36743_i0forward_frame_1 - 0.2 11.3 0.2 0.24 11.0 0.2 1.1 1 0 0 1 1 1 0 ATP dependent DNA ligase domain Lentiviral_Tat PF02998.14 NODE_44478_length_446_cov_46.053528_g36741_i0forward_frame_1 - 0.042 13.9 0.1 0.27 11.3 0.0 2.0 1 1 1 2 2 2 0 Lentiviral Tat protein zf-C2H2 PF00096.26 NODE_44475_length_446_cov_54.216545_g36738_i0forward_frame_1 - 5e-09 36.1 11.6 1e-06 28.8 0.9 3.0 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_44475_length_446_cov_54.216545_g36738_i0forward_frame_1 - 1.6e-08 34.6 7.4 2.6e-07 30.7 0.9 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_44475_length_446_cov_54.216545_g36738_i0forward_frame_1 - 8.8e-06 26.1 6.6 0.00054 20.6 0.6 2.8 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 NODE_44475_length_446_cov_54.216545_g36738_i0forward_frame_1 - 0.00053 19.7 1.0 0.0084 15.8 0.4 2.3 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-BED PF02892.15 NODE_44475_length_446_cov_54.216545_g36738_i0forward_frame_1 - 0.0015 18.5 1.2 0.0037 17.2 1.2 1.7 1 0 0 1 1 1 1 BED zinc finger zf-C2HC_2 PF13913.6 NODE_44475_length_446_cov_54.216545_g36738_i0forward_frame_1 - 0.059 13.3 8.4 0.22 11.5 0.8 3.0 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-C2H2_6 PF13912.6 NODE_44475_length_446_cov_54.216545_g36738_i0forward_frame_1 - 0.17 11.9 6.4 0.97 9.5 1.7 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger IQ PF00612.27 NODE_44471_length_446_cov_72.075426_g36735_i0reverse_frame_1 - 6.8e-06 25.4 0.9 1.6e-05 24.3 0.9 1.7 1 0 0 1 1 1 1 IQ calmodulin-binding motif Gemini_BL1 PF00845.19 NODE_44470_length_446_cov_72.080292_g36734_i0reverse_frame_1 - 0.0016 18.1 1.7 0.0016 18.1 1.3 1.3 1 1 0 1 1 1 1 Geminivirus BL1 movement protein Thioredoxin_5 PF13743.6 NODE_44449_length_446_cov_113.712895_g36713_i0forward_frame_1 - 0.45 10.2 4.7 0.54 9.9 4.7 1.1 1 0 0 1 1 1 0 Thioredoxin SAP PF02037.27 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.00089 19.0 0.5 0.0041 16.9 0.0 2.3 2 0 0 2 2 2 1 SAP domain SYCE1 PF15233.6 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.005 16.9 3.6 0.0073 16.4 3.6 1.2 1 0 0 1 1 1 1 Synaptonemal complex central element protein 1 Sec2p PF06428.11 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.016 15.1 4.4 0.016 15.1 4.4 2.1 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p CCDC-167 PF15188.6 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.049 14.0 1.8 0.12 12.7 1.8 1.7 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 APC_N_CC PF16689.5 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.16 12.0 2.3 0.28 11.3 2.3 1.3 1 0 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain FlgN PF05130.12 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.25 11.9 4.3 0.36 11.3 4.3 1.3 1 0 0 1 1 1 0 FlgN protein PV-1 PF06637.11 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.94 8.2 6.7 1.4 7.7 6.7 1.4 1 1 0 1 1 1 0 PV-1 protein (PLVAP) AdoHcyase PF05221.17 NODE_44436_length_446_cov_2544.428224_g36701_i0forward_frame_1 - 8.8e-23 80.9 0.1 1.3e-22 80.3 0.1 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase BofA PF07441.11 NODE_44435_length_446_cov_2660.233577_g36700_i0reverse_frame_1 - 4.1 7.7 12.1 0.54 10.5 2.4 2.2 2 0 0 2 2 2 0 SigmaK-factor processing regulatory protein BofA DXP_redisom_C PF08436.12 NODE_44432_length_446_cov_28943.688564_g36697_i0reverse_frame_1 - 0.11 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Adeno_E4 PF05385.11 NODE_44425_length_447_cov_2.582524_g36690_i0forward_frame_1 - 0.12 12.5 1.8 0.18 11.9 1.8 1.2 1 0 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein AlaDh_PNT_C PF01262.21 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 3.2e-51 173.7 1.3 3.6e-51 173.5 1.3 1.0 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.00021 20.7 0.3 0.11 11.8 0.1 2.1 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.047 13.9 0.9 0.28 11.4 0.7 2.0 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain NAD_binding_2 PF03446.15 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.052 13.7 0.8 0.14 12.3 0.8 1.6 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase ADH_zinc_N PF00107.26 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.068 13.2 0.3 0.11 12.5 0.3 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase Pyr_redox PF00070.27 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.097 13.2 0.6 0.3 11.7 0.2 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.11 11.7 1.1 0.11 11.7 1.1 1.3 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Flot PF15975.5 NODE_44419_length_447_cov_2.980583_g36684_i0reverse_frame_1 - 4.4e-38 130.2 6.6 5.7e-38 129.8 6.6 1.1 1 0 0 1 1 1 1 Flotillin DUF5599 PF18141.1 NODE_44415_length_447_cov_3.473301_g36680_i0reverse_frame_1 - 0.097 12.9 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5599) Aldo_ket_red PF00248.21 NODE_44414_length_447_cov_3.631068_g36679_i0reverse_frame_1 - 3.8e-38 131.4 0.0 4e-38 131.3 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Flavodoxin_2 PF02525.17 NODE_44414_length_447_cov_3.631068_g36679_i0reverse_frame_1 - 0.069 12.9 0.0 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin-like fold E2F_TDP PF02319.20 NODE_44406_length_447_cov_5.631068_g36673_i0forward_frame_1 - 3.1e-10 39.9 0.2 5.2e-10 39.2 0.2 1.3 1 0 0 1 1 1 1 E2F/DP family winged-helix DNA-binding domain ArAE_2_N PF10337.9 NODE_44403_length_447_cov_52.859223_g36670_i0reverse_frame_1 - 0.002 17.2 0.6 0.0025 16.9 0.6 1.1 1 0 0 1 1 1 1 Putative ER transporter, 6TM, N-terminal Glutaredoxin PF00462.24 NODE_44370_length_447_cov_1280.381068_g36639_i0forward_frame_1 - 0.0016 18.6 0.0 0.003 17.8 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin DUF4131 PF13567.6 NODE_44360_length_448_cov_1.409201_g36630_i0forward_frame_2 - 9.3 5.9 8.1 14 5.3 7.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Nucleoporin_FG PF13634.6 NODE_44357_length_448_cov_1.692494_g36627_i0reverse_frame_3 - 3.3e-06 27.9 44.3 0.01 16.7 22.6 2.7 1 1 1 2 2 2 2 Nucleoporin FG repeat region DUF2345 PF10106.9 NODE_44357_length_448_cov_1.692494_g36627_i0reverse_frame_3 - 0.16 11.8 7.6 14 5.6 7.6 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2345) DUF5088 PF17008.5 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_3 - 0.0096 15.7 1.3 0.012 15.4 0.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF5088) Tropomyosin_1 PF12718.7 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.00039 20.6 10.6 0.00052 20.2 10.6 1.2 1 0 0 1 1 1 1 Tropomyosin like DHR10 PF18595.1 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.0023 18.0 8.5 0.0034 17.4 8.5 1.2 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain Uds1 PF15456.6 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.0082 16.3 4.5 0.014 15.5 4.5 1.3 1 0 0 1 1 1 1 Up-regulated During Septation DUF724 PF05266.14 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.1 12.4 7.3 0.12 12.1 7.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Exonuc_VII_L PF02601.15 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 1.8 8.0 6.1 2.1 7.9 6.1 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit CENP-N PF05238.13 NODE_44354_length_448_cov_2.290557_g36624_i0forward_frame_3 - 0.3 10.3 1.7 0.36 10.1 1.7 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Cyt_bd_oxida_I PF01654.17 NODE_44351_length_448_cov_2.360775_g36621_i0reverse_frame_3 - 7.5e-75 252.1 19.7 8.3e-75 252.0 19.7 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I CobT PF06213.12 NODE_44350_length_448_cov_2.411622_g36620_i0reverse_frame_3 - 0.033 13.6 3.6 0.043 13.2 3.6 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 NODE_44350_length_448_cov_2.411622_g36620_i0reverse_frame_3 - 0.22 10.8 3.1 0.25 10.6 3.1 1.2 1 0 0 1 1 1 0 NOA36 protein RNA_pol_3_Rpc31 PF11705.8 NODE_44350_length_448_cov_2.411622_g36620_i0reverse_frame_3 - 3.1 8.0 14.2 4.3 7.5 14.2 1.3 1 1 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DUF2456 PF10445.9 NODE_44350_length_448_cov_2.411622_g36620_i0forward_frame_2 - 0.043 13.9 0.2 0.071 13.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2456) DUF4051 PF13260.6 NODE_44344_length_448_cov_3.159806_g36614_i0reverse_frame_2 - 0.069 12.9 1.1 0.13 12.0 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) ATP-synt_B PF00430.18 NODE_44342_length_448_cov_3.767554_g36612_i0reverse_frame_2 - 0.29 11.2 22.7 0.51 10.4 22.7 1.5 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) DUF883 PF05957.13 NODE_44342_length_448_cov_3.767554_g36612_i0reverse_frame_2 - 1.7 9.3 14.9 1.4 9.6 12.3 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) GIDA_assoc PF13932.6 NODE_44340_length_448_cov_5.435835_g36610_i0reverse_frame_3 - 0.091 12.9 0.8 0.1 12.8 0.8 1.1 1 0 0 1 1 1 0 GidA associated domain DUF3584 PF12128.8 NODE_44338_length_448_cov_42.263923_g36608_i0reverse_frame_2 - 0.017 12.7 9.2 0.021 12.4 9.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) KAAG1 PF15354.6 NODE_44334_length_448_cov_79.184019_g36604_i0forward_frame_2 - 3.4 8.3 7.9 5.4 7.6 7.3 1.6 1 1 0 1 1 1 0 Kidney-associated antigen 1 DUF1180 PF06679.12 NODE_44328_length_448_cov_91.128329_g36598_i0reverse_frame_2 - 0.074 13.5 0.6 0.11 12.9 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1180) DUF1143 PF06608.11 NODE_44327_length_448_cov_93.726392_g36597_i0forward_frame_2 - 0.0093 16.0 0.3 0.015 15.4 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1143) Amidase PF01425.21 NODE_44323_length_448_cov_102.256659_g36593_i0forward_frame_2 - 2.2e-10 40.1 0.0 2.6e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 Amidase ELYS-bb PF16687.5 NODE_44323_length_448_cov_102.256659_g36593_i0forward_frame_2 - 0.0074 15.0 0.0 0.0093 14.6 0.0 1.1 1 0 0 1 1 1 1 beta-propeller of ELYS nucleoporin VAR1 PF05316.12 NODE_44311_length_448_cov_200.249395_g36581_i0forward_frame_3 - 0.0039 16.3 0.3 0.0044 16.1 0.3 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal protein (VAR1) Arg_decarbox_C PF17944.1 NODE_44310_length_448_cov_289.474576_g36580_i0forward_frame_3 - 0.054 14.1 0.2 0.095 13.3 0.2 1.4 1 0 0 1 1 1 0 Arginine decarboxylase C-terminal helical extension SSXT PF05030.12 NODE_44310_length_448_cov_289.474576_g36580_i0forward_frame_3 - 0.16 11.6 1.7 0.27 10.9 1.7 1.3 1 0 0 1 1 1 0 SSXT protein (N-terminal region) Got1 PF04178.12 NODE_44303_length_448_cov_1885.912833_g32367_i2reverse_frame_3 - 1.2e-10 41.7 10.6 1.2e-10 41.7 10.6 2.0 2 1 1 3 3 3 2 Got1/Sft2-like family DUF4133 PF13571.6 NODE_44303_length_448_cov_1885.912833_g32367_i2reverse_frame_3 - 0.13 12.6 2.6 0.27 11.6 2.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) SLATT_5 PF18160.1 NODE_44300_length_448_cov_21903.462470_g36574_i0forward_frame_3 - 3 7.1 10.6 1.9 7.8 5.8 2.0 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 HTH_1 PF00126.27 NODE_44295_length_449_cov_2.408213_g36569_i0reverse_frame_2 - 5.6e-06 26.2 0.1 1.2e-05 25.2 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_AsnC-type PF13404.6 NODE_44295_length_449_cov_2.408213_g36569_i0reverse_frame_2 - 0.0087 15.9 0.1 0.019 14.8 0.1 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 NODE_44295_length_449_cov_2.408213_g36569_i0reverse_frame_2 - 0.012 15.0 0.1 0.71 9.3 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 MarR_2 PF12802.7 NODE_44295_length_449_cov_2.408213_g36569_i0reverse_frame_2 - 0.078 12.9 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_10 PF04967.12 NODE_44295_length_449_cov_2.408213_g36569_i0reverse_frame_2 - 0.099 12.5 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain Iso_dh PF00180.20 NODE_44295_length_449_cov_2.408213_g36569_i0forward_frame_2 - 7.3e-07 28.6 0.0 8.6e-07 28.4 0.0 1.1 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Plug PF07715.15 NODE_44292_length_449_cov_2.628019_g36566_i0reverse_frame_2 - 4.1e-19 69.1 1.6 4.1e-19 69.1 1.6 1.7 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain Cnn_1N PF07989.11 NODE_44290_length_449_cov_2.915459_g36564_i0reverse_frame_3 - 0.047 13.8 1.5 0.083 13.1 1.5 1.3 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF2512 PF10710.9 NODE_44287_length_449_cov_3.072464_g36561_i0forward_frame_3 - 0.0021 17.7 0.6 0.0026 17.4 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2512) Chorismate_bind PF00425.18 NODE_44286_length_449_cov_3.079710_g36560_i0reverse_frame_3 - 1.5e-55 188.6 0.0 1.6e-55 188.5 0.0 1.0 1 0 0 1 1 1 1 chorismate binding enzyme NTPase_I-T PF01931.18 NODE_44273_length_449_cov_80.913043_g36547_i0reverse_frame_3 - 2.3e-12 47.0 0.0 3.1e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF84 Microvir_lysis PF04517.12 NODE_44259_length_449_cov_161.101449_g36534_i0reverse_frame_3 - 0.36 10.8 4.7 0.72 9.8 2.2 2.3 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus SoPB_HTH PF18090.1 NODE_44259_length_449_cov_161.101449_g36534_i0reverse_frame_2 - 0.057 13.5 0.1 0.088 13.0 0.1 1.2 1 0 0 1 1 1 0 Centromere-binding protein HTH domain SPATA6 PF14909.6 NODE_44256_length_449_cov_179.531401_g36531_i0reverse_frame_3 - 0.096 12.8 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Spermatogenesis-assoc protein 6 DUF4373 PF14297.6 NODE_44250_length_449_cov_315.207729_g36525_i0reverse_frame_2 - 0.075 13.8 0.1 0.12 13.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4373) zf-met PF12874.7 NODE_44240_length_449_cov_13167.871981_g36518_i0forward_frame_2 - 0.51 10.8 2.1 15 6.2 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type DUF4635 PF15466.6 NODE_44237_length_450_cov_2.168675_g36515_i0forward_frame_2 - 0.038 13.5 1.7 1.9 8.0 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4635) DUF432 PF04254.13 NODE_44235_length_450_cov_2.534940_g36513_i0reverse_frame_3 - 0.018 15.2 0.4 0.03 14.5 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF432) DUF3935 PF13071.6 NODE_44231_length_450_cov_2.696386_g36509_i0reverse_frame_2 - 0.0023 18.4 1.6 0.0042 17.6 1.6 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3935) RNase_E_G PF10150.9 NODE_44231_length_450_cov_2.696386_g36509_i0forward_frame_3 - 0.18 11.2 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease E/G family NPCC PF08058.11 NODE_44226_length_450_cov_3.151807_g36504_i0forward_frame_3 - 0.064 13.3 1.3 0.11 12.6 0.8 1.5 1 1 1 2 2 2 0 Nuclear pore complex component # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks149.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks149.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks149.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks149.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- p450 PF00067.22 ORF47003 - 1.8e-44 152.3 0.8 2.6e-44 151.8 0.8 1.2 1 0 0 1 1 1 1 Cytochrome P450 p450 PF00067.22 ORF41872 - 2.2e-42 145.4 0.1 2.6e-42 145.1 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF5442 PF17514.2 ORF41872 - 0.13 12.4 0.1 1.4 9.2 0.0 2.4 1 1 0 2 2 2 0 Family of unknown function (DUF5442) PDZ_3 PF17815.1 ORF35780 - 1.7e-30 105.8 0.0 2.7e-30 105.1 0.0 1.2 1 0 0 1 1 1 1 PDZ domain Trypsin_2 PF13365.6 ORF35780 - 1.9e-22 80.8 0.7 1.9e-21 77.5 0.2 2.2 2 0 0 2 2 2 1 Trypsin-like peptidase domain Trypsin PF00089.26 ORF35780 - 7.7e-13 48.8 0.1 1.3e-12 48.0 0.1 1.3 1 0 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 ORF35780 - 0.02 14.7 0.3 8.2 6.4 0.2 2.9 2 0 0 2 2 2 0 PDZ domain PDZ PF00595.24 ORF35780 - 0.12 12.7 0.2 0.38 11.1 0.1 1.8 2 0 0 2 2 2 0 PDZ domain p450 PF00067.22 ORF31275 - 8.5e-54 183.0 0.2 1.2e-53 182.6 0.2 1.2 1 0 0 1 1 1 1 Cytochrome P450 DUF3989 PF13150.6 ORF31275 - 0.75 9.6 2.8 24 4.7 1.5 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3989) p450 PF00067.22 ORF27277 - 2.8e-52 178.0 0.2 3.8e-52 177.6 0.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 Pyr_redox_3 PF13738.6 ORF22623 - 2.5e-09 36.8 0.0 2e-07 30.5 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF22623 - 4.3e-08 32.7 0.1 4e-05 23.0 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 ORF22623 - 1.6e-06 26.8 0.1 2.9e-05 22.7 0.0 2.4 2 1 0 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 ORF22623 - 1.5e-05 25.2 0.7 4.3e-05 23.7 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 ORF22623 - 0.0013 19.1 0.0 0.014 15.8 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding Amino_oxidase PF01593.24 ORF22623 - 0.0062 15.9 0.0 0.12 11.6 0.0 2.2 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Thi4 PF01946.17 ORF22623 - 0.0062 15.8 0.1 0.016 14.5 0.0 1.6 2 0 0 2 2 2 1 Thi4 family K_oxygenase PF13434.6 ORF22623 - 0.01 15.0 0.0 0.048 12.8 0.0 2.0 2 1 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 ORF22623 - 0.022 14.3 0.9 0.17 11.5 0.4 2.4 2 0 0 2 2 2 0 FAD dependent oxidoreductase Shikimate_DH PF01488.20 ORF22623 - 0.055 13.5 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase FAD_oxidored PF12831.7 ORF22623 - 0.065 12.6 0.2 0.11 11.8 0.2 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF22623 - 0.065 12.5 0.1 2 7.6 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.22 ORF22623 - 0.07 12.2 0.2 12 4.8 0.0 2.4 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_binding_2 PF00890.24 ORF22623 - 0.075 12.1 0.2 0.14 11.2 0.2 1.4 1 0 0 1 1 1 0 FAD binding domain Amidase PF01425.21 ORF19871 - 1.2e-72 245.4 0.1 3.7e-71 240.4 0.1 2.0 1 1 0 1 1 1 1 Amidase ATP-synt_A PF00119.20 ORF19871 - 0.2 11.6 0.0 0.35 10.8 0.0 1.3 1 0 0 1 1 1 0 ATP synthase A chain Pyr_redox_3 PF13738.6 ORF112154 - 2.5e-09 36.8 0.0 2e-07 30.5 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF112154 - 4.3e-08 32.7 0.1 4e-05 23.0 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 ORF112154 - 1.6e-06 26.8 0.1 2.9e-05 22.7 0.0 2.4 2 1 0 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 ORF112154 - 1.5e-05 25.2 0.7 4.3e-05 23.7 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 ORF112154 - 0.0013 19.1 0.0 0.014 15.8 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding Amino_oxidase PF01593.24 ORF112154 - 0.0062 15.9 0.0 0.12 11.6 0.0 2.2 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Thi4 PF01946.17 ORF112154 - 0.0062 15.8 0.1 0.016 14.5 0.0 1.6 2 0 0 2 2 2 1 Thi4 family K_oxygenase PF13434.6 ORF112154 - 0.01 15.0 0.0 0.048 12.8 0.0 2.0 2 1 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 ORF112154 - 0.022 14.3 0.9 0.17 11.5 0.4 2.4 2 0 0 2 2 2 0 FAD dependent oxidoreductase Shikimate_DH PF01488.20 ORF112154 - 0.055 13.5 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase FAD_oxidored PF12831.7 ORF112154 - 0.065 12.6 0.2 0.11 11.8 0.2 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF112154 - 0.065 12.5 0.1 2 7.6 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.22 ORF112154 - 0.07 12.2 0.2 12 4.8 0.0 2.4 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_binding_2 PF00890.24 ORF112154 - 0.075 12.1 0.2 0.14 11.2 0.2 1.4 1 0 0 1 1 1 0 FAD binding domain DUF3300 PF11737.8 ORF49327 - 2.3e-67 226.9 4.8 2.3e-67 226.9 4.8 2.4 2 2 0 2 2 2 1 Protein of unknown function (DUF3300) ABC1 PF03109.16 ORF19496 - 5.2e-05 23.4 0.0 0.00013 22.1 0.0 1.7 1 0 0 1 1 1 1 ABC1 family APH PF01636.23 ORF19496 - 0.00023 21.2 0.3 0.00023 21.2 0.3 2.6 2 1 0 2 2 2 1 Phosphotransferase enzyme family DNA_pol_A PF00476.20 ORF93140 - 2.7e-51 174.8 0.0 4.3e-50 170.8 0.0 2.4 1 1 1 2 2 2 1 DNA polymerase family A SAP PF02037.27 ORF93140 - 1.2e-08 34.5 1.1 2.7e-08 33.4 0.3 2.1 2 0 0 2 2 2 1 SAP domain Oxidored_nitro PF00148.19 ORF93140 - 0.024 13.4 0.0 0.098 11.4 0.0 1.8 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase TPR_1 PF00515.28 ORF75436 - 1.5e-22 78.4 2.5 5.2e-07 29.2 0.1 4.5 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF75436 - 1.4e-19 69.5 4.8 8e-07 28.6 0.1 4.5 3 2 2 5 5 5 4 TPR repeat TPR_2 PF07719.17 ORF75436 - 3e-18 64.4 6.6 2.2e-06 27.4 0.3 4.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 ORF75436 - 1.6e-13 50.6 5.0 1.1e-07 31.8 0.2 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF75436 - 3.4e-11 42.4 0.8 0.001 19.1 0.0 4.8 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF75436 - 2.7e-10 40.7 14.2 1e-06 29.2 3.6 3.6 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF75436 - 1.5e-09 37.5 0.9 0.063 13.7 0.0 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF75436 - 3.9e-06 27.2 15.7 0.14 13.1 0.5 5.0 2 1 3 5 5 4 3 Tetratricopeptide repeat TPR_15 PF13429.6 ORF75436 - 5.4e-06 25.8 1.3 0.0016 17.7 0.3 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF75436 - 2.8e-05 24.5 5.9 0.061 13.8 1.8 3.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF75436 - 3.7e-05 23.9 6.6 0.0071 16.6 3.4 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF75436 - 0.053 13.4 9.1 0.86 9.6 0.7 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat ACP_syn_III PF08545.10 ORF75436 - 0.12 12.3 0.1 0.24 11.3 0.1 1.4 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TPR_7 PF13176.6 ORF75436 - 0.12 12.5 1.0 17 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat SHNi-TPR PF10516.9 ORF75436 - 0.12 11.8 4.3 4.9 6.7 0.1 3.3 3 0 0 3 3 3 0 SHNi-TPR TPR_4 PF07721.14 ORF75436 - 7.2 7.6 6.2 39 5.3 1.7 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TMV_coat PF00721.21 ORF75436 - 9.6 6.0 11.4 9.2 6.1 0.2 3.3 2 2 1 3 3 3 0 Virus coat protein (TMV like) p450 PF00067.22 ORF62730 - 1.4e-37 129.5 0.0 1.8e-37 129.2 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 AMP-binding PF00501.28 ORF42451 - 3.4e-89 299.3 0.0 4.1e-89 299.1 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF42451 - 4.7e-15 56.3 0.6 1.4e-14 54.8 0.2 2.1 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ATP-grasp_5 PF13549.6 ORF231 - 2.8e-75 252.6 0.3 1e-74 250.8 0.1 2.0 2 0 0 2 2 2 1 ATP-grasp domain Acetyltransf_1 PF00583.25 ORF231 - 2e-09 37.7 0.0 4.5e-09 36.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 ORF231 - 6.3e-09 36.6 0.0 1.9e-08 35.1 0.0 1.9 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF231 - 9.3e-05 22.4 0.0 0.0002 21.3 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF231 - 0.0002 21.6 0.0 0.15 12.2 0.0 2.3 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF231 - 0.0068 16.8 0.0 0.016 15.6 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF231 - 0.015 15.3 0.0 0.082 12.9 0.0 2.2 2 0 0 2 2 2 0 FR47-like protein CPSase_L_D2 PF02786.17 ORF231 - 0.064 12.7 0.0 0.17 11.3 0.0 1.8 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Acetyltransf_CG PF14542.6 ORF231 - 0.069 13.3 0.1 0.45 10.7 0.0 2.2 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase Beta-lactamase PF00144.24 ORF22936 - 1.1e-21 77.5 0.1 2.1e-21 76.5 0.1 1.5 1 0 0 1 1 1 1 Beta-lactamase VWA_2 PF13519.6 ORF18148 - 2.1e-06 28.3 0.0 4.2e-06 27.3 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF18148 - 0.00025 21.4 0.0 0.00037 20.8 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 ORF18148 - 0.00045 20.2 0.4 0.00092 19.2 0.4 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain DGCR6 PF07324.11 NODE_7088_length_1553_cov_52.405138_g5183_i0forward_frame_1 - 0.028 14.1 0.6 0.049 13.3 0.6 1.3 1 0 0 1 1 1 0 DiGeorge syndrome critical region 6 (DGCR6) protein DUF3053 PF11254.8 NODE_7088_length_1553_cov_52.405138_g5183_i0forward_frame_1 - 0.056 13.0 0.9 0.13 11.8 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3053) BCCT PF02028.17 NODE_7040_length_1557_cov_3.639290_g5144_i0reverse_frame_2 - 1.4e-172 574.6 42.1 1.6e-172 574.4 42.1 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DUF5510 PF17629.2 NODE_7040_length_1557_cov_3.639290_g5144_i0reverse_frame_2 - 0.12 12.3 2.6 1 9.3 0.1 3.0 2 0 0 2 2 2 0 Family of unknown function (DUF5510) DUF4381 PF14316.6 ORF92299 - 0.0087 16.3 0.4 0.023 15.0 0.4 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4381) NUFIP2 PF15293.6 ORF90064 - 7.7 5.3 8.9 12 4.6 8.9 1.3 1 0 0 1 1 1 0 Nuclear fragile X mental retardation-interacting protein 2 Act-Frag_cataly PF09192.10 ORF81306 - 3.5e-19 69.3 0.0 8.3e-19 68.0 0.0 1.5 1 1 0 1 1 1 1 Actin-fragmin kinase, catalytic DUF4614 PF15391.6 ORF81306 - 0.014 15.4 0.2 0.022 14.7 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) p450 PF00067.22 ORF77633 - 1e-42 146.5 1.5 1.3e-42 146.1 1.5 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF5354 PF17305.2 ORF77633 - 0.0036 17.5 0.2 1.6 9.0 0.0 3.0 2 1 1 3 3 3 2 Family of unknown function (DUF5354) Phosphodiest PF01663.22 ORF77633 - 0.065 12.8 0.1 0.087 12.4 0.1 1.2 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase GBP PF02263.19 ORF67744 - 6.9e-59 199.2 0.2 1.8e-58 197.8 0.2 1.7 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain GBP_C PF02841.14 ORF67744 - 6.5e-12 45.5 11.7 6.5e-12 45.5 11.7 1.7 2 1 0 2 2 2 1 Guanylate-binding protein, C-terminal domain MMR_HSR1 PF01926.23 ORF67744 - 0.036 14.1 0.0 0.12 12.5 0.0 2.0 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF2524 PF10732.9 ORF67744 - 0.56 10.5 6.3 2.2 8.7 5.1 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2524) RNA_helicase PF00910.22 ORF67744 - 0.68 10.4 3.9 83 3.6 0.9 3.5 2 1 0 3 3 3 0 RNA helicase OKR_DC_1 PF01276.20 ORF43149 - 9.3e-144 479.2 0.0 1.1e-143 479.0 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.15 ORF43149 - 1.4e-41 141.9 0.0 3.1e-41 140.8 0.0 1.5 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain Pyridoxal_deC PF00282.19 ORF43149 - 2.4e-05 23.2 0.0 3.9e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Late_protein_L1 PF00500.18 ORF43149 - 0.014 14.2 0.0 0.2 10.4 0.0 2.0 2 0 0 2 2 2 0 L1 (late) protein DUF4381 PF14316.6 ORF2808 - 0.0087 16.3 0.4 0.023 15.0 0.4 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4381) Na_Pi_cotrans PF02690.15 ORF12706 - 1.2e-38 132.3 25.2 1.8e-31 109.1 6.5 2.4 1 1 1 2 2 2 2 Na+/Pi-cotransporter PhoU PF01895.19 ORF12706 - 0.0001 22.7 5.8 0.15 12.5 2.3 3.2 2 1 1 3 3 3 2 PhoU domain Asp_Arg_Hydrox PF05118.15 ORF105539 - 4.4e-15 55.9 0.0 6.6e-15 55.3 0.0 1.3 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase PKcGMP_CC PF16808.5 ORF86958 - 0.08 12.8 0.5 0.08 12.8 0.5 4.1 4 1 1 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase LPP PF04728.13 ORF86958 - 0.42 11.0 3.2 4.4 7.8 0.1 3.4 2 1 0 2 2 2 0 Lipoprotein leucine-zipper OmpH PF03938.14 ORF86958 - 0.6 10.4 20.8 0.047 14.0 1.0 3.6 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) Spc7 PF08317.11 ORF86958 - 8.5 5.2 24.6 1.3 7.9 6.2 3.2 3 0 0 3 3 3 0 Spc7 kinetochore protein NAPRTase PF04095.16 ORF68112 - 2.7e-61 207.2 0.0 3.7e-61 206.8 0.0 1.2 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF5598 PF18127.1 ORF68112 - 1e-40 138.1 0.1 3.6e-40 136.3 0.1 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5598) RRM_1 PF00076.22 ORF5840 - 1.8e-07 30.9 0.1 5.5e-07 29.3 0.1 1.8 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF5840 - 0.014 15.2 0.1 1.6 8.7 0.0 2.6 2 0 0 2 2 2 0 Occluded RNA-recognition motif DUF2510 PF10708.9 ORF5840 - 0.035 13.9 0.0 0.073 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2510) Macoilin PF09726.9 ORF5840 - 1.4 7.4 33.6 1.9 7.0 33.6 1.2 1 0 0 1 1 1 0 Macoilin family NAPRTase PF04095.16 ORF25649 - 2.7e-61 207.2 0.0 3.7e-61 206.8 0.0 1.2 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF5598 PF18127.1 ORF25649 - 1e-40 138.1 0.1 3.6e-40 136.3 0.1 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5598) Alanine_zipper PF11839.8 ORF14861 - 0.01 16.2 11.6 0.01 16.2 11.6 5.3 4 1 1 5 5 5 0 Alanine-zipper, major outer membrane lipoprotein NIF PF03031.18 ORF10738 - 6.6e-41 139.7 0.4 6.6e-41 139.7 0.4 2.6 3 0 0 3 3 3 1 NLI interacting factor-like phosphatase NODP PF07684.12 ORF10738 - 0.13 12.5 0.4 1.7 8.8 0.0 2.5 2 0 0 2 2 2 0 NOTCH protein NAPRTase PF04095.16 ORF102808 - 2.7e-61 207.2 0.0 3.7e-61 206.8 0.0 1.2 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF5598 PF18127.1 ORF102808 - 1e-40 138.1 0.1 3.6e-40 136.3 0.1 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5598) AAA_30 PF13604.6 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 2.8e-34 118.5 0.6 1.2e-32 113.2 0.6 2.3 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 3.4e-30 105.3 0.1 6.9e-30 104.3 0.1 1.5 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 1e-24 87.4 0.0 2e-24 86.4 0.0 1.5 1 0 0 1 1 1 1 Helicase AAA_11 PF13086.6 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 5.3e-10 39.5 0.2 4.1e-06 26.8 0.0 2.2 2 0 0 2 2 2 2 AAA domain SH3_13 PF18335.1 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 3e-09 36.5 0.0 8.4e-09 35.1 0.0 1.7 2 0 0 2 2 1 1 ATP-dependent RecD-like DNA helicase SH3 domain UvrD-helicase PF00580.21 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 5.4e-07 29.4 1.3 6.6e-07 29.1 0.2 1.6 2 0 0 2 2 2 1 UvrD/REP helicase N-terminal domain AAA_22 PF13401.6 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 2.2e-06 28.0 0.0 6.3e-06 26.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 1.1e-05 24.8 0.0 1.5e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_28 PF13521.6 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.0016 18.7 0.1 0.0038 17.5 0.1 1.7 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.0017 18.1 0.2 0.81 9.4 0.0 3.0 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase PhoH PF02562.16 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.0018 17.8 0.0 0.0076 15.7 0.1 2.0 2 1 0 2 2 1 1 PhoH-like protein AAA_16 PF13191.6 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.0021 18.4 1.7 0.0062 16.9 1.7 2.0 1 1 0 1 1 1 1 AAA ATPase domain MukB PF04310.12 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.0037 17.1 0.0 0.0063 16.3 0.0 1.3 1 0 0 1 1 1 1 MukB N-terminal T2SSE PF00437.20 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.009 15.1 0.0 0.017 14.2 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein Bcl-2 PF00452.19 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.012 16.3 0.0 0.033 14.9 0.0 1.7 1 0 0 1 1 1 0 Apoptosis regulator proteins, Bcl-2 family CbiA PF01656.23 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.016 15.3 0.3 0.039 14.0 0.3 1.7 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain FtsK_SpoIIIE PF01580.18 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.033 13.6 0.0 0.06 12.7 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family SRP54 PF00448.22 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.055 13.1 0.2 0.088 12.4 0.2 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.1 12.5 0.1 0.3 11.0 0.1 1.8 1 0 0 1 1 1 0 NTPase TrwB_AAD_bind PF10412.9 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.12 11.3 0.1 0.17 10.8 0.1 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_33 PF13671.6 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.12 12.5 0.0 0.88 9.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 NODE_7150_length_1547_cov_3.993386_g5229_i0forward_frame_1 - 0.15 12.5 0.0 0.3 11.5 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF1126 PF06565.12 ORF91729 - 7.5e-82 270.0 6.2 7.5e-28 96.4 0.4 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain RHH_7 PF16777.5 ORF91729 - 0.26 11.7 2.2 8.3 6.9 0.0 3.9 4 0 0 4 4 4 0 Transcriptional regulator, RHH-like, CopG HC2 PF07382.11 ORF81722 - 1.9e-07 31.4 0.1 2.8e-07 30.8 0.1 1.1 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 LPAM_1 PF08139.12 ORF81722 - 0.34 11.5 1.0 0.53 10.9 1.0 1.3 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site RCC1_2 PF13540.6 ORF78487 - 8.3e-19 66.9 26.4 0.0014 18.4 0.1 10.3 11 0 0 11 11 11 7 Regulator of chromosome condensation (RCC1) repeat Cutinase PF01083.22 ORF78487 - 0.044 13.7 1.7 10 6.0 0.0 4.8 4 3 2 6 6 6 0 Cutinase Lipocalin_7 PF14651.6 ORF78487 - 0.06 13.3 0.2 8 6.4 0.0 3.7 4 0 0 4 4 4 0 Lipocalin / cytosolic fatty-acid binding protein family PKD PF00801.20 ORF78487 - 1 9.3 4.0 40 4.2 0.1 3.8 4 0 0 4 4 4 0 PKD domain EMP70 PF02990.16 ORF7649 - 4.3e-125 418.3 16.8 5.9e-125 417.9 16.8 1.2 1 0 0 1 1 1 1 Endomembrane protein 70 Cu-oxidase_3 PF07732.15 ORF3882 - 8e-32 109.7 0.1 2.1e-31 108.4 0.1 1.8 1 0 0 1 1 1 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 ORF3882 - 2.1e-25 89.1 13.7 9.2e-24 83.7 9.7 2.9 2 1 0 2 2 2 2 Multicopper oxidase Cu-oxidase PF00394.22 ORF3882 - 4.2e-09 36.7 0.0 2.1e-05 24.7 0.0 2.7 2 1 0 2 2 2 2 Multicopper oxidase TAT_signal PF10518.9 ORF3882 - 0.00013 21.6 0.0 0.00034 20.3 0.0 1.8 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence EF-hand_1 PF00036.32 ORF2875 - 1e-10 40.3 4.9 2.2e-05 23.7 0.4 3.2 3 0 0 3 3 2 2 EF hand EF-hand_6 PF13405.6 ORF2875 - 9.7e-09 34.5 1.4 0.00032 20.4 0.3 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF2875 - 4.4e-07 29.1 1.6 0.00035 19.9 0.1 3.2 2 0 0 2 2 2 2 EF hand Ion_trans PF00520.31 ORF2875 - 6.8e-07 28.8 13.1 1.1e-06 28.0 13.1 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_8 PF13833.6 ORF2875 - 2.2e-05 24.2 6.5 0.0032 17.3 0.2 3.2 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF2875 - 4.3e-05 23.9 3.2 0.00018 21.9 2.8 2.3 2 0 0 2 2 2 1 EF-hand domain pair DUF2096 PF09869.9 ORF2875 - 0.04 14.0 0.2 0.64 10.1 0.0 2.4 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2096) SAP PF02037.27 ORF2875 - 0.048 13.4 0.1 0.048 13.4 0.1 2.4 3 0 0 3 3 3 0 SAP domain MerR-DNA-bind PF09278.11 ORF2875 - 0.14 12.7 2.1 2.5 8.7 0.0 3.2 2 0 0 2 2 2 0 MerR, DNA binding UPF0492 PF15744.5 ORF2875 - 0.2 10.8 10.8 0.31 10.2 10.8 1.3 1 0 0 1 1 1 0 Uncharacterized protein family UPF0492 SPARC_Ca_bdg PF10591.9 ORF2875 - 0.38 11.1 3.2 0.6 10.4 0.3 2.8 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Eno-Rase_FAD_bd PF07055.12 ORF2875 - 0.76 10.2 5.5 1.5 9.3 0.7 2.9 3 0 0 3 3 2 0 Enoyl reductase FAD binding domain TFCD_C PF12612.8 ORF18974 - 1.3e-43 149.0 0.2 4.1e-43 147.4 0.0 1.9 2 0 0 2 2 2 1 Tubulin folding cofactor D C terminal HEAT PF02985.22 ORF18974 - 0.08 13.2 0.0 57 4.4 0.0 4.0 3 0 0 3 3 3 0 HEAT repeat ATP-synt_E_2 PF08112.11 ORF18974 - 0.48 10.7 4.0 0.37 11.1 1.1 2.4 2 0 0 2 2 2 0 ATP synthase epsilon subunit DUF5074 PF16819.5 NODE_7173_length_1546_cov_79.703508_g5247_i0reverse_frame_2 - 0.017 15.1 4.3 0.021 14.9 0.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5074) DUF4153 PF13687.6 NODE_7141_length_1548_cov_3.831461_g5225_i0forward_frame_2 - 2.3e-44 151.6 27.2 2.3e-44 151.6 27.2 2.8 1 1 1 3 3 3 2 Domain of unknown function (DUF4153) Ligase_CoA PF00549.19 ORF90218 - 2.1e-48 164.0 0.0 7.1e-47 159.0 0.0 2.6 3 0 0 3 3 3 1 CoA-ligase CoA_binding PF02629.19 ORF90218 - 2.6e-16 60.1 0.3 9.9e-15 55.0 0.0 2.7 3 0 0 3 3 3 1 CoA binding domain Succ_CoA_lig PF13607.6 ORF90218 - 0.00018 21.3 0.0 0.00046 20.0 0.0 1.7 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain Isochorismatase PF00857.20 ORF90218 - 0.094 12.9 0.0 4.3 7.5 0.0 2.7 3 0 0 3 3 3 0 Isochorismatase family Ligase_CoA PF00549.19 ORF86665 - 2.1e-48 164.0 0.0 7.1e-47 159.0 0.0 2.6 3 0 0 3 3 3 1 CoA-ligase CoA_binding PF02629.19 ORF86665 - 2.6e-16 60.1 0.3 9.9e-15 55.0 0.0 2.7 3 0 0 3 3 3 1 CoA binding domain Succ_CoA_lig PF13607.6 ORF86665 - 0.00018 21.3 0.0 0.00046 20.0 0.0 1.7 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain Isochorismatase PF00857.20 ORF86665 - 0.094 12.9 0.0 4.3 7.5 0.0 2.7 3 0 0 3 3 3 0 Isochorismatase family rve PF00665.26 ORF84036 - 0.00033 20.8 0.1 0.0011 19.1 0.0 2.0 2 0 0 2 2 2 1 Integrase core domain RAMP PF04901.13 ORF84036 - 0.021 14.8 0.0 0.034 14.1 0.0 1.3 1 0 0 1 1 1 0 Receptor activity modifying family Calpain_inhib PF00748.19 ORF73642 - 0.00043 20.8 9.1 0.32 11.5 0.3 3.3 2 1 1 3 3 3 2 Calpain inhibitor Aminotran_1_2 PF00155.21 ORF65929 - 1.7e-32 113.0 0.0 2.2e-32 112.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Enkurin PF13864.6 ORF65929 - 0.1 13.0 0.0 0.23 11.9 0.0 1.5 1 0 0 1 1 1 0 Calmodulin-binding Aldedh PF00171.22 ORF61808 - 1.3e-109 366.8 0.0 1.5e-109 366.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Asp PF00026.23 ORF59960 - 3.6e-07 29.9 0.7 0.00016 21.2 0.3 3.5 1 1 1 2 2 2 2 Eukaryotic aspartyl protease Calpain_inhib PF00748.19 ORF46107 - 9.1e-05 23.0 7.2 0.27 11.7 0.2 3.4 2 1 1 3 3 3 2 Calpain inhibitor Calpain_inhib PF00748.19 ORF33379 - 0.00043 20.8 9.1 0.32 11.5 0.3 3.3 2 1 1 3 3 3 2 Calpain inhibitor Wx5_PLAF3D7 PF09688.10 ORF278 - 0.0021 18.1 3.9 0.0021 18.1 3.9 3.7 3 0 0 3 3 3 1 Protein of unknown function (Wx5_PLAF3D7) ABC_tran_CTD PF16326.5 ORF278 - 0.0095 16.2 20.8 0.023 15.0 0.4 3.8 3 0 0 3 3 3 2 ABC transporter C-terminal domain MCPsignal PF00015.21 ORF278 - 0.043 13.6 5.3 0.1 12.4 2.1 2.5 2 1 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain ZnuA PF01297.17 ORF278 - 0.046 13.1 4.3 0.073 12.5 1.2 2.2 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic TMPIT PF07851.13 ORF278 - 0.12 11.6 17.2 0.15 11.2 0.9 2.4 2 0 0 2 2 2 0 TMPIT-like protein SMI1_KNR4 PF09346.10 ORF278 - 0.14 12.6 0.1 0.14 12.6 0.1 2.4 2 1 0 2 2 2 0 SMI1 / KNR4 family (SUKH-1) ADIP PF11559.8 ORF278 - 0.51 10.4 15.6 0.079 13.0 11.0 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Rotamase PF00639.21 ORF278 - 0.51 11.3 0.1 0.51 11.3 0.1 3.3 2 1 0 2 2 2 0 PPIC-type PPIASE domain DUF1664 PF07889.12 ORF278 - 2.6 8.1 8.8 3.4 7.7 3.6 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF4407 PF14362.6 ORF278 - 5.4 6.3 11.3 0.83 8.9 7.6 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) TPH PF13868.6 ORF89016 - 3.5e-68 229.7 145.3 3.5e-68 229.7 145.3 2.1 2 0 0 2 2 2 1 Trichohyalin-plectin-homology domain RITA PF17066.5 ORF89016 - 0.018 14.7 0.1 0.018 14.7 0.1 2.2 2 0 0 2 2 2 0 RBPJ-interacting and tubulin associated protein Pkinase PF00069.25 ORF86005 - 5.8e-47 160.3 0.3 5.8e-47 160.3 0.3 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86005 - 6.3e-22 78.1 0.0 1.4e-21 77.0 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase cNMP_binding PF00027.29 ORF86005 - 1.4e-19 69.9 0.1 7.9e-17 61.1 0.0 3.0 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain Seadorna_VP7 PF07387.11 ORF86005 - 0.015 14.4 0.0 0.015 14.4 0.0 2.9 3 0 0 3 3 3 0 Seadornavirus VP7 Kinase-like PF14531.6 ORF86005 - 0.059 12.7 0.0 0.09 12.1 0.0 1.3 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF86005 - 0.13 12.1 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pro_isomerase PF00160.21 ORF84337 - 3.8e-53 180.0 0.2 8.5e-53 178.9 0.2 1.6 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ANAPC4_WD40 PF12894.7 ORF84337 - 0.0042 17.4 0.0 1 9.7 0.0 3.2 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Chloroa_b-bind PF00504.21 ORF83938 - 1.2e-71 240.5 2.3 3.1e-29 102.6 0.1 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein IMCp PF12314.8 ORF81484 - 1e-32 112.3 119.9 4.4e-08 33.3 27.8 9.0 2 1 6 9 9 9 9 Inner membrane complex protein zinc_ribbon_2 PF13240.6 ORF81484 - 0.0014 18.3 2.9 0.0025 17.5 2.9 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF81484 - 0.0022 18.0 0.8 0.0039 17.2 0.8 1.4 1 0 0 1 1 1 1 Double zinc ribbon MgtE_N PF03448.17 ORF81484 - 0.066 13.8 0.4 0.066 13.8 0.4 2.7 3 0 0 3 3 3 0 MgtE intracellular N domain zf-ribbon_3 PF13248.6 ORF81484 - 0.21 11.1 1.2 0.42 10.1 1.2 1.6 1 0 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 ORF81484 - 0.41 10.8 4.5 16 5.7 0.1 2.6 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_9 PF14369.6 ORF81484 - 0.58 10.5 2.6 18 5.7 0.0 2.7 2 0 0 2 2 2 0 zinc-ribbon UPF0547 PF10571.9 ORF81484 - 1.4 9.1 7.3 7.5 6.7 7.3 2.3 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 Chloroa_b-bind PF00504.21 ORF77623 - 1.2e-71 240.5 2.3 3.1e-29 102.6 0.1 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein Chloroa_b-bind PF00504.21 ORF75348 - 1.2e-71 240.5 2.3 3.1e-29 102.6 0.1 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein Chloroa_b-bind PF00504.21 ORF68190 - 1.2e-71 240.5 2.3 3.1e-29 102.6 0.1 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein Patatin PF01734.22 ORF62171 - 4e-18 66.3 0.2 1.9e-17 64.1 0.2 2.0 1 1 0 1 1 1 1 Patatin-like phospholipase TOH_N PF12549.8 ORF62171 - 0.021 14.7 0.7 0.05 13.5 0.7 1.6 1 0 0 1 1 1 0 Tyrosine hydroxylase N terminal CAP18_C PF12153.8 ORF62171 - 0.5 10.3 4.3 7.2 6.6 0.5 2.7 3 0 0 3 3 3 0 LPS binding domain of CAP18 (C terminal) Spore_YhaL PF14147.6 ORF62171 - 1.4 8.6 6.0 1.6 8.5 3.0 2.3 1 1 1 2 2 2 0 Sporulation protein YhaL C2 PF00168.30 ORF61992 - 2.5e-11 43.8 0.0 7.8e-11 42.2 0.0 1.8 2 0 0 2 2 2 1 C2 domain Pkinase PF00069.25 ORF38015 - 5.8e-47 160.3 0.3 5.8e-47 160.3 0.3 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF38015 - 6.3e-22 78.1 0.0 1.4e-21 77.0 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase cNMP_binding PF00027.29 ORF38015 - 1.4e-19 69.9 0.1 7.9e-17 61.1 0.0 3.0 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain Seadorna_VP7 PF07387.11 ORF38015 - 0.015 14.4 0.0 0.015 14.4 0.0 2.9 3 0 0 3 3 3 0 Seadornavirus VP7 Kinase-like PF14531.6 ORF38015 - 0.059 12.7 0.0 0.09 12.1 0.0 1.3 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF38015 - 0.13 12.1 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family SHIPPO-rpt PF07004.12 ORF31300 - 0.0062 17.4 6.3 0.29 12.1 0.2 4.8 4 0 0 4 4 4 1 Sperm-tail PG-rich repeat E3_UbLigase_R4 PF13764.6 ORF31300 - 0.41 8.7 3.3 0.13 10.4 0.3 1.6 2 0 0 2 2 2 0 E3 ubiquitin-protein ligase UBR4 SLATT_1 PF18181.1 ORF29040 - 1.8e-08 34.3 8.2 8.3e-08 32.2 2.6 2.5 2 0 0 2 2 2 2 SMODS and SLOG-associating 2TM effector domain 1 DUF4231 PF14015.6 ORF29040 - 0.00016 22.1 1.7 0.0014 19.1 0.1 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF4231) C2 PF00168.30 ORF2591 - 2.8e-26 91.8 0.0 1.6e-16 60.5 0.0 4.3 3 1 1 4 4 4 4 C2 domain SHIPPO-rpt PF07004.12 ORF24977 - 0.0062 17.4 6.3 0.29 12.1 0.2 4.8 4 0 0 4 4 4 1 Sperm-tail PG-rich repeat E3_UbLigase_R4 PF13764.6 ORF24977 - 0.41 8.7 3.3 0.13 10.4 0.3 1.6 2 0 0 2 2 2 0 E3 ubiquitin-protein ligase UBR4 Rdx PF10262.9 ORF110719 - 0.0018 18.4 0.1 0.012 15.7 0.0 2.3 2 0 0 2 2 2 1 Rdx family PAS_9 PF13426.7 ORF110719 - 0.091 13.0 0.2 0.47 10.7 0.0 2.1 2 0 0 2 2 2 0 PAS domain TPH PF13868.6 ORF105896 - 3.5e-68 229.7 145.3 3.5e-68 229.7 145.3 2.1 2 0 0 2 2 2 1 Trichohyalin-plectin-homology domain RITA PF17066.5 ORF105896 - 0.018 14.7 0.1 0.018 14.7 0.1 2.2 2 0 0 2 2 2 0 RBPJ-interacting and tubulin associated protein Rcd1 PF04078.13 ORF96770 - 1.5e-101 339.1 7.5 2e-101 338.7 7.5 1.1 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like RESP18 PF14948.6 ORF96770 - 0.11 12.8 1.1 0.32 11.3 1.1 1.8 1 0 0 1 1 1 0 RESP18 domain Phage_integrase PF00589.22 ORF85994 - 0.0013 18.6 0.0 0.0023 17.8 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Nrap_D4 PF17405.2 ORF85994 - 0.083 12.2 0.0 0.15 11.4 0.0 1.4 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 Thioredoxin_6 PF13848.6 ORF84062 - 1.6e-13 51.0 0.0 1.8e-12 47.6 0.0 2.4 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 ORF84062 - 0.025 14.6 0.0 1.6 8.7 0.0 3.1 3 0 0 3 3 3 0 Thioredoxin SIS PF01380.22 ORF7944 - 2.6e-29 101.7 0.2 2.7e-16 59.6 0.0 2.4 2 0 0 2 2 2 2 SIS domain GATase_7 PF13537.6 ORF7944 - 2.3e-07 30.8 0.0 4.8e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain bact-PGI_C PF10432.9 ORF7944 - 7e-05 22.9 0.0 0.00019 21.5 0.0 1.7 2 0 0 2 2 2 1 Bacterial phospho-glucose isomerase C-terminal SIS domain GATase_6 PF13522.6 ORF7944 - 0.0085 16.3 0.0 0.023 14.9 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain FAD_binding_6 PF00970.24 ORF75445 - 2e-07 31.3 0.0 6.5e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF75445 - 0.00011 22.8 0.0 0.0028 18.3 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF75445 - 0.0026 17.9 0.1 0.024 14.8 0.0 2.4 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase FAD_binding_6 PF00970.24 ORF75380 - 2e-07 31.3 0.0 6.5e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF75380 - 0.00011 22.8 0.0 0.0028 18.3 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF75380 - 0.0026 17.9 0.1 0.024 14.8 0.0 2.4 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Glyco_hydro_63 PF03200.16 ORF74529 - 1.4e-09 37.3 6.0 2.2e-05 23.5 0.1 5.1 5 1 0 5 5 5 2 Glycosyl hydrolase family 63 C-terminal domain ATP-synt_ab PF00006.25 ORF6510 - 1e-73 247.5 0.1 1.8e-73 246.7 0.1 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 ORF6510 - 7.6e-46 155.5 0.7 1.4e-45 154.6 0.7 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 ORF6510 - 5.3e-13 49.3 0.1 1.2e-12 48.1 0.1 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain ATPase PF06745.13 ORF6510 - 9.8e-05 21.8 0.1 0.00017 21.0 0.1 1.4 1 0 0 1 1 1 1 KaiC ATPase_2 PF01637.18 ORF6510 - 0.0084 16.0 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea HAS-barrel PF09378.10 ORF6510 - 0.016 15.4 0.1 0.075 13.2 0.0 2.2 2 1 0 2 2 2 0 HAS barrel domain Phage_integrase PF00589.22 ORF64465 - 0.0012 18.6 0.0 0.0023 17.8 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Nrap_D4 PF17405.2 ORF64465 - 0.1 11.9 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 PPL4 PF18188.1 ORF6045 - 4.7e-05 23.4 0.2 0.069 13.1 0.0 2.3 2 0 0 2 2 2 2 Prim-pol 4 CwfJ_C_1 PF04677.15 ORF50090 - 1.8e-24 86.0 0.1 3.2e-24 85.1 0.1 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 RRM_1 PF00076.22 ORF50090 - 5e-12 45.5 0.0 1.6e-11 43.9 0.0 1.9 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CwfJ_C_2 PF04676.14 ORF50090 - 2.8e-08 34.5 0.0 5.1e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 2 PG_isomerase_N PF18353.1 ORF50090 - 0.057 13.8 0.0 0.56 10.6 0.0 2.4 2 0 0 2 2 2 0 Phosphoglucose isomerase N-terminal domain RRM_7 PF16367.5 ORF50090 - 0.19 11.9 0.0 0.62 10.2 0.0 1.9 2 0 0 2 2 2 0 RNA recognition motif FAD_binding_6 PF00970.24 ORF37972 - 2e-07 31.3 0.0 6.5e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF37972 - 0.00011 22.8 0.0 0.0028 18.3 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF37972 - 0.0026 17.9 0.1 0.024 14.8 0.0 2.4 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Pkinase PF00069.25 ORF34009 - 5e-50 170.3 0.0 7.1e-50 169.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF34009 - 1.4e-34 119.6 0.0 1.8e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF34009 - 3.1e-06 26.7 0.0 6.1e-06 25.8 0.0 1.5 1 0 0 1 1 1 1 Kinase-like p450 PF00067.22 ORF33370 - 1.7e-50 172.1 1.1 2.5e-50 171.6 1.1 1.2 1 0 0 1 1 1 1 Cytochrome P450 CoA_trans PF01144.23 ORF29629 - 7.4e-27 94.2 0.3 2.7e-26 92.3 0.1 2.0 2 0 0 2 2 2 1 Coenzyme A transferase EF-hand_7 PF13499.6 ORF24453 - 4.8e-24 84.6 7.6 1.5e-15 57.4 0.4 3.3 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF24453 - 2.8e-18 64.2 2.6 8.1e-05 22.3 0.1 4.7 4 0 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF24453 - 1.2e-17 62.0 4.8 2.2e-06 26.8 0.1 4.9 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF24453 - 6.9e-15 54.6 6.9 2.2e-11 43.4 0.2 4.5 2 2 2 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF24453 - 1.4e-12 46.5 3.7 4.7e-05 22.7 0.1 4.7 4 0 0 4 4 4 2 EF hand TerB PF05099.13 ORF24453 - 0.0032 17.4 0.1 0.07 13.1 0.0 2.4 2 0 0 2 2 2 1 Tellurite resistance protein TerB SurA_N_3 PF13624.6 ORF24453 - 0.021 14.6 0.9 0.12 12.1 0.0 2.6 2 1 0 2 2 2 0 SurA N-terminal domain RST PF12174.8 ORF24453 - 0.068 13.1 0.0 0.34 10.9 0.0 2.1 2 0 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain SPARC_Ca_bdg PF10591.9 ORF24453 - 0.19 12.1 2.4 1.2 9.4 0.0 3.1 3 1 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF24453 - 0.21 11.5 2.4 4.8 7.1 0.1 3.2 2 1 2 4 4 4 0 Caleosin related protein DUF3220 PF11516.8 ORF22102 - 0.048 13.9 2.7 4.8 7.4 0.1 3.8 3 1 0 3 3 3 0 Protein of unknown function (DUF3120) Fibritin_C PF07921.12 ORF22102 - 0.13 12.4 0.0 0.78 9.9 0.0 2.3 2 0 0 2 2 2 0 Fibritin C-terminal region MnmE_helical PF12631.7 ORF22102 - 0.31 11.2 10.2 4.9 7.3 1.2 3.6 3 2 0 3 3 3 0 MnmE helical domain Apolipoprotein PF01442.18 ORF22102 - 0.55 10.1 43.0 0.41 10.5 3.2 5.0 3 1 0 3 3 3 0 Apolipoprotein A1/A4/E domain DUF4795 PF16043.5 ORF22102 - 1.2 8.7 19.0 0.1 12.2 0.9 4.1 3 1 1 4 4 4 0 Domain of unknown function (DUF4795) KxDL PF10241.9 ORF22102 - 1.7 9.0 15.1 0.17 12.2 1.1 4.9 6 0 0 6 6 6 0 Uncharacterized conserved protein Baculo_PEP_C PF04513.12 ORF22102 - 2.3 8.3 14.5 4 7.5 0.3 4.6 4 2 0 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus Sugarporin_N PF11471.8 ORF22102 - 3.2 7.8 15.4 1.5 8.8 0.1 4.4 4 0 0 4 4 4 0 Maltoporin periplasmic N-terminal extension FAD_binding_6 PF00970.24 ORF21251 - 2e-07 31.3 0.0 6.5e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF21251 - 0.00011 22.8 0.0 0.0028 18.3 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF21251 - 0.0026 17.9 0.1 0.024 14.8 0.0 2.4 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase CENP-F_leu_zip PF10473.9 ORF94651 - 0.0039 17.2 19.8 0.0039 17.2 19.8 3.3 2 1 1 3 3 3 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF2968 PF11180.8 ORF94651 - 0.017 14.8 25.1 0.33 10.6 6.8 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF2968) Met_gamma_lyase PF06838.11 ORF94651 - 0.02 13.4 1.5 0.039 12.5 1.5 1.5 1 0 0 1 1 1 0 Methionine gamma-lyase ZapB PF06005.12 ORF94651 - 1 9.8 46.5 0.54 10.7 11.6 5.0 2 2 1 3 3 3 0 Cell division protein ZapB MAD PF05557.13 ORF94651 - 2 6.7 57.1 1 7.6 53.7 2.2 1 1 1 2 2 2 0 Mitotic checkpoint protein DUF4806 PF16064.5 ORF94651 - 3 8.2 9.5 18 5.7 1.0 3.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4806) PK PF00224.21 ORF70613 - 5.2e-139 463.0 2.4 6.7e-139 462.6 2.4 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF70613 - 5.1e-29 100.9 0.5 1.8e-28 99.1 0.5 2.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF70613 - 0.0024 17.1 1.3 0.0053 15.9 1.1 1.8 1 1 1 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family HJURP_C PF12347.8 ORF54933 - 0.14 12.2 0.1 0.56 10.3 0.0 2.1 2 0 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat Sulfatase PF00884.23 ORF52806 - 4.2e-35 121.6 0.1 5.3e-35 121.3 0.1 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF52806 - 0.0036 17.0 0.0 0.0079 15.8 0.0 1.6 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase_C PF14707.6 ORF52806 - 0.011 16.4 0.0 0.029 15.1 0.0 1.6 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase GCS2 PF04107.13 ORF52806 - 0.028 13.8 0.0 0.069 12.5 0.0 1.6 2 0 0 2 2 2 0 Glutamate-cysteine ligase family 2(GCS2) DUF4976 PF16347.5 ORF52806 - 0.15 12.3 1.4 0.17 12.1 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4976) PK PF00224.21 ORF4068 - 5.2e-139 463.0 2.4 6.7e-139 462.6 2.4 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF4068 - 5.1e-29 100.9 0.5 1.8e-28 99.1 0.5 2.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF4068 - 0.0024 17.1 1.3 0.0053 15.9 1.1 1.8 1 1 1 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 ORF36952 - 5.2e-139 463.0 2.4 6.7e-139 462.6 2.4 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF36952 - 5.1e-29 100.9 0.5 1.8e-28 99.1 0.5 2.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF36952 - 0.0024 17.1 1.3 0.0053 15.9 1.1 1.8 1 1 1 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 ORF2530 - 5.2e-139 463.0 2.4 6.7e-139 462.6 2.4 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF2530 - 5.1e-29 100.9 0.5 1.8e-28 99.1 0.5 2.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF2530 - 0.0024 17.1 1.3 0.0053 15.9 1.1 1.8 1 1 1 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family FAD_binding_3 PF01494.19 ORF250 - 4.3e-25 88.7 0.0 6.2e-25 88.2 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 ORF250 - 0.0035 17.5 0.9 0.012 15.8 0.3 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 ORF250 - 0.028 13.1 0.0 0.045 12.5 0.0 1.3 1 0 0 1 1 1 0 HI0933-like protein Lycopene_cycl PF05834.12 ORF250 - 0.032 13.3 0.0 0.053 12.6 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein DUF5451 PF17532.2 ORF250 - 0.045 14.0 0.2 0.099 12.9 0.0 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5451) ApbA PF02558.16 ORF250 - 0.11 12.1 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA CRM1_C PF08767.11 ORF108122 - 1.9e-85 286.9 15.6 1.9e-85 286.9 15.6 2.3 2 1 0 2 2 2 1 CRM1 C terminal CRM1_repeat_3 PF18787.1 ORF108122 - 3.4e-08 33.5 3.5 3.7e-07 30.1 1.4 3.3 4 0 0 4 4 4 1 CRM1 / Exportin repeat 3 DUF2063 PF09836.9 ORF108122 - 0.11 12.7 0.0 2.4 8.5 0.0 2.8 2 0 0 2 2 2 0 Putative DNA-binding domain SpoIIE PF07228.12 ORF108122 - 0.12 12.2 0.2 0.43 10.5 0.0 1.9 3 0 0 3 3 3 0 Stage II sporulation protein E (SpoIIE) Cnd1 PF12717.7 ORF108122 - 2.8 8.0 14.2 0.78 9.8 3.6 4.2 2 2 1 3 3 3 0 non-SMC mitotic condensation complex subunit 1 WD40 PF00400.32 ORF100394 - 3e-41 138.6 17.5 1.1e-07 32.4 0.3 7.0 7 0 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF100394 - 2.2e-18 66.3 2.4 1.3e-08 35.1 0.1 6.0 1 1 6 7 7 7 5 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF100394 - 5e-08 33.0 0.2 0.0008 19.3 0.0 3.3 1 1 2 3 3 3 2 Eukaryotic translation initiation factor eIF2A VID27 PF08553.10 ORF100394 - 0.0028 16.8 0.0 0.0046 16.1 0.0 1.2 1 0 0 1 1 1 1 VID27 C-terminal WD40-like domain VIR_N PF15912.5 ORF100394 - 0.006 16.2 2.1 0.01 15.5 2.1 1.3 1 0 0 1 1 1 1 Virilizer, N-terminal IKI3 PF04762.12 ORF100394 - 0.013 13.5 0.3 2.3 6.1 0.1 2.3 3 0 0 3 3 3 0 IKI3 family Frtz PF11768.8 ORF100394 - 0.17 10.2 0.1 8.1 4.6 0.0 2.2 1 1 1 2 2 2 0 WD repeat-containing and planar cell polarity effector protein Fritz RCC1 PF00415.18 NODE_7362_length_1533_cov_321.787717_g4752_i2reverse_frame_1 - 1.7e-08 34.9 0.4 0.00022 21.8 0.0 3.5 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_7362_length_1533_cov_321.787717_g4752_i2reverse_frame_1 - 2.6e-06 27.1 12.4 3.8e-05 23.3 0.0 3.8 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat NQRA PF05896.11 NODE_7362_length_1533_cov_321.787717_g4752_i2forward_frame_1 - 0.15 11.5 0.1 0.45 9.9 0.0 1.6 2 0 0 2 2 2 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ZZ PF00569.17 ORF91941 - 4.5e-21 74.4 25.2 2.2e-10 40.2 8.0 2.3 2 0 0 2 2 2 2 Zinc finger, ZZ type N_BRCA1_IG PF16158.5 ORF91941 - 2.2e-05 25.1 0.0 6.2e-05 23.7 0.0 1.8 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene HrpJ PF07201.11 ORF91941 - 0.0085 16.4 1.4 1 9.7 0.1 2.4 2 0 0 2 2 2 2 HrpJ-like domain HEAT_EZ PF13513.6 ORF91941 - 0.019 15.5 0.2 0.048 14.2 0.2 1.7 1 0 0 1 1 1 0 HEAT-like repeat HEAT_2 PF13646.6 ORF91941 - 0.026 14.9 1.1 0.06 13.7 0.2 2.0 2 0 0 2 2 2 0 HEAT repeats HEAT PF02985.22 ORF91941 - 0.14 12.5 0.1 0.56 10.6 0.1 2.1 1 0 0 1 1 1 0 HEAT repeat Glyco_hydro_127 PF07944.12 ORF79963 - 8.1e-15 54.3 0.0 1e-14 54.0 0.0 1.1 1 0 0 1 1 1 1 Beta-L-arabinofuranosidase, GH127 PDH_E1_M PF17831.1 ORF79142 - 4.5e-93 311.0 0.8 6.9e-93 310.4 0.8 1.2 1 0 0 1 1 1 1 Pyruvate dehydrogenase E1 component middle domain Transketolase_C PF02780.20 ORF79142 - 0.0029 17.5 0.3 0.015 15.1 0.0 2.3 2 0 0 2 2 2 1 Transketolase, C-terminal domain Ammonium_transp PF00909.21 ORF68060 - 3.9e-110 368.3 29.5 4.9e-110 368.0 29.5 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF3138 PF11336.8 ORF68060 - 0.022 13.4 3.1 0.037 12.7 3.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Vir_act_alpha_C PF10400.9 ORF68060 - 0.057 14.1 0.1 0.096 13.4 0.1 1.3 1 0 0 1 1 1 0 Virulence activator alpha C-term Trp_oprn_chp PF09534.10 ORF68060 - 1.9 8.3 10.1 0.24 11.2 2.0 3.1 3 0 0 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Paz_1 PF18349.1 ORF56042 - 0.76 9.8 10.9 8.1 6.5 0.1 3.8 2 1 0 4 4 4 0 PAZ domain Thioredoxin_6 PF13848.6 ORF43160 - 1.3e-10 41.5 2.5 1.3e-10 41.5 2.5 3.3 3 1 1 4 4 4 2 Thioredoxin-like domain DNA_pol3_delta PF06144.13 ORF43160 - 0.09 12.6 2.0 0.2 11.4 0.1 2.4 2 1 1 3 3 3 0 DNA polymerase III, delta subunit Thioredoxin_6 PF13848.6 ORF41345 - 1.3e-10 41.5 2.5 1.3e-10 41.5 2.5 3.3 3 1 1 4 4 4 2 Thioredoxin-like domain DNA_pol3_delta PF06144.13 ORF41345 - 0.09 12.6 2.0 0.2 11.4 0.1 2.4 2 1 1 3 3 3 0 DNA polymerase III, delta subunit MatE PF01554.18 ORF40953 - 4e-35 120.9 27.2 4.2e-20 72.0 2.8 2.6 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 ORF40953 - 2.6e-05 24.3 5.7 2.6e-05 24.3 5.7 3.5 2 1 0 3 3 3 1 Polysaccharide biosynthesis C-terminal domain Paz_1 PF18349.1 ORF19121 - 0.76 9.8 10.9 8.1 6.5 0.1 3.8 2 1 0 4 4 4 0 PAZ domain IMPDH PF00478.25 ORF11709 - 2.2e-58 197.9 0.1 3.2e-58 197.4 0.1 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 ORF11709 - 3e-12 46.8 1.1 1.1e-07 32.2 0.2 3.0 3 0 0 3 3 3 2 CBS domain NMO PF03060.15 ORF11709 - 4.1e-05 23.1 5.4 0.00036 20.0 1.6 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase ThiG PF05690.14 ORF11709 - 0.00013 21.4 3.0 0.00045 19.6 2.7 1.9 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG DUF561 PF04481.12 ORF11709 - 0.0052 16.0 1.6 1.8 7.7 0.2 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF561) FMN_dh PF01070.18 ORF11709 - 0.19 10.7 3.4 0.43 9.6 3.4 1.5 1 0 0 1 1 1 0 FMN-dependent dehydrogenase Chloroa_b-bind PF00504.21 ORF111224 - 5.5e-83 277.3 0.3 6.5e-32 111.3 0.0 3.1 3 0 0 3 3 3 3 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF111224 - 0.011 15.9 0.0 14 5.9 0.0 3.6 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal Pentapeptide_2 PF01469.18 ORF111224 - 2.7 7.9 11.7 2.8 7.9 3.3 2.6 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) RCC1_2 PF13540.6 NODE_7362_length_1533_cov_321.787717_g4752_i2reverse_frame_2 - 5.7e-10 38.7 2.8 8.9e-08 31.7 0.0 3.5 3 0 0 3 3 3 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_7362_length_1533_cov_321.787717_g4752_i2reverse_frame_2 - 0.00011 22.7 0.4 0.24 12.1 0.0 3.9 4 1 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat Glyco_hydro_20 PF00728.22 ORF9516 - 1.8e-77 261.2 0.2 2.2e-77 260.8 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain Glycohydro_20b2 PF14845.6 ORF9516 - 2.3e-05 25.0 0.0 6.2e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 beta-acetyl hexosaminidase like Glyco_hydro_20b PF02838.15 ORF9516 - 0.18 12.6 0.0 0.3 11.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, domain 2 PALP PF00291.25 ORF73159 - 1.7e-65 221.4 0.0 2.2e-65 221.0 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CBS PF00571.28 ORF73159 - 5.9e-08 33.0 0.6 8.7e-06 26.1 0.1 3.1 2 0 0 2 2 2 2 CBS domain DinB_2 PF12867.7 ORF73024 - 0.1 13.1 0.2 0.25 11.9 0.0 1.6 2 0 0 2 2 2 0 DinB superfamily Ank_2 PF12796.7 ORF55244 - 7.6e-39 132.2 4.3 2.4e-08 34.4 0.0 5.4 1 1 5 6 6 6 6 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF55244 - 2e-32 110.8 16.0 2.1e-05 24.7 0.4 7.6 4 2 3 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF55244 - 3.5e-26 88.4 10.0 0.00077 19.7 0.0 9.9 9 1 0 9 9 9 6 Ankyrin repeat Ank_4 PF13637.6 ORF55244 - 3.2e-24 85.0 5.6 2.7e-06 27.8 0.2 7.0 4 1 4 8 8 8 6 Ankyrin repeats (many copies) Ank PF00023.30 ORF55244 - 1.2e-22 79.3 10.1 0.0026 18.1 0.0 9.4 8 1 1 9 9 9 6 Ankyrin repeat HTH_23 PF13384.6 ORF55244 - 0.15 11.9 0.0 2.6 8.0 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain DUF3677 PF12432.8 ORF52492 - 0.096 13.0 0.1 0.37 11.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3677) Dec-1 PF04624.14 ORF52492 - 0.11 12.3 0.4 0.3 11.0 0.4 1.7 1 0 0 1 1 1 0 Dec-1 repeat zf-RING_14 PF17978.1 ORF42876 - 0.012 16.1 0.3 0.028 14.8 0.3 1.7 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain PUF PF00806.19 ORF26337 - 8.6e-26 88.1 0.4 0.0009 18.8 0.0 7.2 7 0 0 7 7 7 6 Pumilio-family RNA binding repeat FA_FANCE PF11510.8 ORF26337 - 0.26 10.6 5.7 0.24 10.7 0.3 2.8 1 1 0 1 1 1 0 Fanconi Anaemia group E protein FANCE Collagen PF01391.18 ORF26304 - 0.0049 16.6 15.2 0.0049 16.6 15.2 1.9 2 0 0 2 2 2 1 Collagen triple helix repeat (20 copies) TFIIA PF03153.13 ORF26304 - 0.017 15.1 17.9 0.026 14.5 17.9 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Cupin_2 PF07883.11 ORF26304 - 0.04 13.6 0.0 0.088 12.5 0.0 1.5 1 0 0 1 1 1 0 Cupin domain Spt20 PF12090.8 ORF26304 - 3.2 7.3 25.6 4.7 6.7 25.6 1.2 1 0 0 1 1 1 0 Spt20 family Suf PF05843.14 ORF26304 - 3.6 7.5 15.0 6.8 6.6 15.0 1.3 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) SpoIIP PF07454.11 ORF26304 - 3.8 6.9 6.0 5.7 6.3 6.0 1.2 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) PAT1 PF09770.9 ORF26304 - 7.3 4.7 14.6 8.9 4.4 14.6 1.1 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Waikav_capsid_1 PF12264.8 NODE_7454_length_1527_cov_226.849196_g5473_i0reverse_frame_1 - 0.048 13.2 17.1 8.7 5.8 0.2 5.9 4 2 2 6 6 6 0 Waikavirus capsid protein 1 B277 PF17623.2 NODE_7454_length_1527_cov_226.849196_g5473_i0reverse_frame_1 - 0.068 12.2 13.5 1.6 7.8 0.2 3.9 4 0 0 4 4 4 0 Domain of unknown function PH_TFIIH PF08567.11 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_1 - 3e-23 82.0 10.1 2.1 8.7 0.0 11.1 1 1 10 11 11 11 11 TFIIH p62 subunit, N-terminal domain RCC1_2 PF13540.6 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_1 - 2.9e-20 71.5 27.2 0.11 12.3 0.1 11.7 12 0 0 12 12 12 10 Regulator of chromosome condensation (RCC1) repeat bPH_2 PF03703.14 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_1 - 3.7e-06 27.1 2.9 7.5 6.8 0.0 6.0 5 2 2 8 8 8 3 Bacterial PH domain GST_C_2 PF13410.6 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_1 - 0.0014 18.6 11.8 92 3.2 0.0 9.2 7 3 0 7 7 7 0 Glutathione S-transferase, C-terminal domain NPV_P10 PF05531.12 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_1 - 0.096 13.2 13.7 1.5e+02 3.0 0.1 8.1 8 3 3 11 11 11 0 Nucleopolyhedrovirus P10 protein DUF1398 PF07166.11 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_1 - 0.86 9.7 4.6 71 3.5 0.0 4.7 5 0 0 5 5 5 0 Protein of unknown function (DUF1398) Pkinase PF00069.25 ORF78159 - 8.3e-42 143.4 0.0 1.1e-41 142.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78159 - 2.2e-21 76.3 0.0 3.3e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF78159 - 0.00096 19.1 0.8 0.025 14.5 0.2 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF78159 - 0.086 12.1 0.1 0.86 8.9 0.0 2.1 2 0 0 2 2 2 0 Kinase-like BING4CT PF08149.11 ORF72174 - 3.6e-36 122.8 0.0 3.7e-34 116.4 0.0 2.7 3 0 0 3 3 3 1 BING4CT (NUC141) domain ANAPC4_WD40 PF12894.7 ORF72174 - 0.00031 21.0 0.0 8 6.8 0.0 4.0 3 2 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Mcl1_mid PF12341.8 ORF72174 - 0.014 14.8 0.1 0.14 11.5 0.1 2.1 1 1 0 1 1 1 0 Minichromosome loss protein, Mcl1, middle region WD40 PF00400.32 ORF72174 - 0.018 15.9 0.4 71 4.5 0.1 4.6 6 0 0 6 6 6 0 WD domain, G-beta repeat DMRT-like PF15791.5 ORF72174 - 0.048 14.1 0.7 0.11 12.9 0.7 1.5 1 0 0 1 1 1 0 Doublesex-and mab-3-related transcription factor C1 and C2 ABC_tran PF00005.27 ORF68529 - 5.6e-37 127.3 0.4 2.1e-21 76.9 0.0 3.2 2 1 1 3 3 3 2 ABC transporter AAA_21 PF13304.6 ORF68529 - 1e-13 51.8 0.3 0.00043 20.2 0.0 3.4 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 ORF68529 - 2.4e-11 43.5 7.2 6.5e-11 42.1 4.0 2.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF68529 - 3.6e-06 26.6 0.3 0.61 9.5 0.1 3.2 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF68529 - 0.0051 17.3 0.1 0.0051 17.3 0.1 2.4 3 0 0 3 3 2 1 AAA domain AAA_30 PF13604.6 ORF68529 - 0.011 15.5 0.0 0.021 14.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 ORF68529 - 0.019 15.2 2.3 8.9 6.6 0.0 4.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 ORF68529 - 0.04 13.7 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF68529 - 0.045 14.0 0.3 0.46 10.8 0.1 2.6 2 1 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF68529 - 0.067 12.4 0.2 0.18 11.0 0.1 1.7 2 0 0 2 2 2 0 NB-ARC domain DUF3584 PF12128.8 ORF68529 - 0.091 10.3 5.4 5.1 4.5 0.8 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3584) RecA PF00154.21 ORF68529 - 0.11 11.9 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 recA bacterial DNA recombination protein cobW PF02492.19 ORF68529 - 0.11 12.0 0.1 0.37 10.4 0.1 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RPW8 PF05659.11 ORF68529 - 0.12 12.0 0.0 0.59 9.8 0.0 2.0 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MMR_HSR1 PF01926.23 ORF68529 - 0.13 12.3 0.0 0.29 11.2 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 ORF68529 - 0.15 11.8 0.0 0.45 10.2 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 ORF68529 - 0.17 12.0 0.0 0.17 12.0 0.0 1.9 2 1 0 2 2 1 0 AAA domain NPV_P10 PF05531.12 ORF68529 - 0.26 11.8 1.4 4 8.0 0.4 3.0 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein AAA_25 PF13481.6 ORF68529 - 0.27 10.8 2.1 9.3 5.8 0.1 3.5 4 0 0 4 4 4 0 AAA domain TIR_2 PF13676.6 ORF56865 - 0.0056 17.3 0.0 0.011 16.4 0.0 1.4 1 0 0 1 1 1 1 TIR domain HET PF06985.11 ORF56865 - 0.014 15.7 1.3 0.047 14.0 1.3 1.7 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) Ferric_reduct PF01794.19 ORF49542 - 8.6e-08 32.3 17.6 5.5e-07 29.8 9.9 2.6 2 0 0 2 2 2 2 Ferric reductase like transmembrane component NAD_binding_6 PF08030.12 ORF49542 - 2.4e-07 31.0 0.1 0.015 15.4 0.1 2.3 2 0 0 2 2 2 2 Ferric reductase NAD binding domain NAD_binding_1 PF00175.21 ORF49542 - 0.047 14.3 0.0 0.25 12.0 0.0 2.0 2 0 0 2 2 2 0 Oxidoreductase NAD-binding domain ILVD_EDD PF00920.21 ORF4786 - 5.8e-202 671.9 0.5 6.5e-202 671.7 0.5 1.0 1 0 0 1 1 1 1 Dehydratase family RtcB PF01139.17 ORF47444 - 7.9e-148 493.0 0.0 9e-148 492.8 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB ABC_tran PF00005.27 ORF3781 - 5.6e-37 127.3 0.4 2.1e-21 76.9 0.0 3.2 2 1 1 3 3 3 2 ABC transporter AAA_21 PF13304.6 ORF3781 - 1e-13 51.8 0.3 0.00043 20.2 0.0 3.4 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 ORF3781 - 2.4e-11 43.5 7.2 6.5e-11 42.1 4.0 2.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF3781 - 3.6e-06 26.6 0.3 0.61 9.5 0.1 3.2 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF3781 - 0.0051 17.3 0.1 0.0051 17.3 0.1 2.4 3 0 0 3 3 2 1 AAA domain AAA_30 PF13604.6 ORF3781 - 0.011 15.5 0.0 0.021 14.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 ORF3781 - 0.019 15.2 2.3 8.9 6.6 0.0 4.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 ORF3781 - 0.04 13.7 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF3781 - 0.045 14.0 0.3 0.46 10.8 0.1 2.6 2 1 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF3781 - 0.067 12.4 0.2 0.18 11.0 0.1 1.7 2 0 0 2 2 2 0 NB-ARC domain DUF3584 PF12128.8 ORF3781 - 0.091 10.3 5.4 5.1 4.5 0.8 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3584) RecA PF00154.21 ORF3781 - 0.11 11.9 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 recA bacterial DNA recombination protein cobW PF02492.19 ORF3781 - 0.11 12.0 0.1 0.37 10.4 0.1 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RPW8 PF05659.11 ORF3781 - 0.12 12.0 0.0 0.59 9.8 0.0 2.0 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MMR_HSR1 PF01926.23 ORF3781 - 0.13 12.3 0.0 0.29 11.2 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 ORF3781 - 0.15 11.8 0.0 0.45 10.2 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 ORF3781 - 0.17 12.0 0.0 0.17 12.0 0.0 1.9 2 1 0 2 2 1 0 AAA domain NPV_P10 PF05531.12 ORF3781 - 0.26 11.8 1.4 4 8.0 0.4 3.0 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein AAA_25 PF13481.6 ORF3781 - 0.27 10.8 2.1 9.3 5.8 0.1 3.5 4 0 0 4 4 4 0 AAA domain Ammonium_transp PF00909.21 ORF34252 - 1.4e-109 366.5 28.7 1.7e-109 366.2 28.7 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF3138 PF11336.8 ORF34252 - 0.023 13.3 3.1 0.036 12.7 3.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Trp_oprn_chp PF09534.10 ORF34252 - 0.044 13.6 2.7 0.24 11.2 2.0 2.5 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Vir_act_alpha_C PF10400.9 ORF34252 - 0.054 14.2 0.1 0.096 13.4 0.1 1.3 1 0 0 1 1 1 0 Virulence activator alpha C-term Ferric_reduct PF01794.19 ORF20692 - 8.6e-08 32.3 17.6 5.5e-07 29.8 9.9 2.6 2 0 0 2 2 2 2 Ferric reductase like transmembrane component NAD_binding_6 PF08030.12 ORF20692 - 2.4e-07 31.0 0.1 0.015 15.4 0.1 2.3 2 0 0 2 2 2 2 Ferric reductase NAD binding domain NAD_binding_1 PF00175.21 ORF20692 - 0.047 14.3 0.0 0.25 12.0 0.0 2.0 2 0 0 2 2 2 0 Oxidoreductase NAD-binding domain FGGY_N PF00370.21 ORF18435 - 3.3e-96 321.6 0.3 4.7e-96 321.1 0.3 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 ORF18435 - 1.9e-62 210.5 0.3 6e-62 208.9 0.8 1.6 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain Na_H_antiporter PF03553.14 ORF18408 - 2.5e-46 158.3 14.3 1.5e-32 113.1 7.7 2.2 2 0 0 2 2 2 2 Na+/H+ antiporter family EutB PF06751.11 ORF100649 - 1.7e-202 673.0 0.3 2e-202 672.8 0.3 1.0 1 0 0 1 1 1 1 Ethanolamine ammonia lyase large subunit (EutB) EutA PF06277.11 ORF100649 - 1.5e-08 34.0 0.4 4.7e-08 32.3 0.1 1.9 2 0 0 2 2 2 1 Ethanolamine utilisation protein EutA Imm10 PF15588.6 NODE_7454_length_1527_cov_226.849196_g5473_i0reverse_frame_3 - 0.018 15.1 0.4 71 3.6 0.0 3.7 4 0 0 4 4 4 0 Immunity protein 10 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks14.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks14.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks14.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks14.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AATase PF07247.12 NODE_44222_length_450_cov_15.703614_g36501_i0reverse_frame_3 - 1.6e-05 23.7 0.4 2e-05 23.4 0.4 1.1 1 0 0 1 1 1 1 Alcohol acetyltransferase WES_acyltransf PF03007.16 NODE_44222_length_450_cov_15.703614_g36501_i0reverse_frame_3 - 0.0087 15.8 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain zf-C2H2_3rep PF18868.1 NODE_44222_length_450_cov_15.703614_g36501_i0reverse_frame_3 - 0.044 14.4 0.1 0.094 13.4 0.1 1.5 1 1 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats Helicase_PWI PF18149.1 NODE_44214_length_450_cov_77.645783_g36493_i0reverse_frame_3 - 6.3e-05 23.1 0.5 9.8e-05 22.5 0.4 1.4 1 1 0 1 1 1 1 N-terminal helicase PWI domain DUF5440 PF17509.2 NODE_44212_length_450_cov_79.643373_g36491_i0forward_frame_3 - 0.17 11.5 0.0 0.28 10.8 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5440) TyrRSs_C PF16714.5 NODE_44200_length_450_cov_118.872289_g36479_i0forward_frame_2 - 0.11 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain UB2H PF14814.6 NODE_44196_length_450_cov_180.207229_g36475_i0forward_frame_2 - 0.085 12.9 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain Fer4_5 PF12801.7 NODE_44195_length_450_cov_268.508434_g36474_i0reverse_frame_2 - 0.028 14.4 2.7 0.083 12.9 2.7 1.7 1 1 0 1 1 1 0 4Fe-4S binding domain Sigma70_r2 PF04542.14 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_3 - 0.27 11.0 4.9 12 5.8 0.1 3.0 3 0 0 3 3 3 0 Sigma-70 region 2 bZIP_1 PF00170.21 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.014 15.5 6.3 0.62 10.2 0.5 2.9 2 1 0 3 3 3 0 bZIP transcription factor Rootletin PF15035.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.025 14.6 10.7 0.62 10.1 6.3 2.3 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion TSC22 PF01166.18 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.027 14.8 2.6 3.3 8.1 0.4 2.8 1 1 2 3 3 3 0 TSC-22/dip/bun family ADIP PF11559.8 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.043 13.9 7.8 0.13 12.3 7.4 1.9 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding GAS PF13851.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.05 12.9 9.9 0.87 8.9 5.0 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding AATF-Che1 PF13339.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.079 13.6 9.6 1 10.0 5.0 2.1 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor YabA PF06156.13 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.094 13.4 5.9 1.1 9.9 2.2 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF4472 PF14739.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.13 13.0 9.7 0.15 12.8 6.9 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) FUSC PF04632.12 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.16 10.4 10.1 0.19 10.3 10.1 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Fez1 PF06818.15 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.17 12.3 15.1 0.28 11.6 15.1 1.4 1 1 0 1 1 1 0 Fez1 Spc24 PF08286.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.32 11.2 11.4 0.68 10.2 3.9 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Phage_GPO PF05929.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.48 10.0 7.3 0.97 9.0 7.2 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF4407 PF14362.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.56 9.5 10.9 0.62 9.4 10.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CHDCT2 PF08074.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.63 10.2 3.1 0.86 9.8 3.1 1.3 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain Paralemmin PF03285.15 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.63 9.6 13.3 0.87 9.1 4.0 2.0 1 1 1 2 2 2 0 Paralemmin GrpE PF01025.19 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.81 9.3 8.0 2.3 7.9 2.2 2.2 1 1 1 2 2 2 0 GrpE YlqD PF11068.8 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 1.1 9.7 7.4 1.4 9.3 6.9 1.5 1 1 0 1 1 1 0 YlqD protein DUF3450 PF11932.8 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 1.5 8.0 10.7 1.2 8.4 6.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Uso1_p115_C PF04871.13 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 1.7 9.1 16.4 75 3.7 16.4 2.3 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region UPF0242 PF06785.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 1.9 8.5 8.2 2.4 8.2 8.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 2.1 8.9 19.4 9.3 6.8 18.4 2.2 1 1 0 1 1 1 0 Apg6 coiled-coil region TPR_MLP1_2 PF07926.12 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 2.7 8.1 17.6 7.9 6.6 17.3 2.1 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 3.7 6.3 14.6 4.8 6.0 14.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein GFD1 PF17331.2 NODE_44191_length_450_cov_294.624096_g36470_i0forward_frame_2 - 0.32 11.2 0.1 42 4.5 0.0 2.1 2 0 0 2 2 2 0 GFD1 mRNA transport factor HMG_box PF00505.19 NODE_44183_length_450_cov_3029.604819_g36464_i0forward_frame_3 - 5.2e-07 30.0 0.4 1e-06 29.0 0.4 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_44183_length_450_cov_3029.604819_g36464_i0forward_frame_3 - 0.00013 22.5 0.3 0.00025 21.6 0.3 1.4 1 0 0 1 1 1 1 HMG-box domain EF-hand_1 PF00036.32 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_3 - 9.7e-06 24.8 0.1 1.9e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_3 - 0.00088 19.0 0.0 0.0047 16.8 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_3 - 0.00088 18.7 2.0 0.0012 18.2 0.1 2.1 2 1 1 3 3 3 1 EF hand EF-hand_7 PF13499.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_3 - 0.0012 19.2 0.1 0.0022 18.4 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_2 - 0.0024 17.3 0.2 0.004 16.6 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_2 - 0.011 15.6 0.1 0.023 14.6 0.1 1.5 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_2 - 0.058 13.9 0.0 0.084 13.3 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair NADHdh_A3 PF14987.6 NODE_44179_length_450_cov_44904.106024_g30537_i13reverse_frame_2 - 0.017 15.4 0.0 0.025 14.9 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 DUF3489 PF11994.8 ORF98346 - 0.066 13.3 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) PaaX_C PF08223.11 ORF98346 - 0.085 13.1 0.1 0.21 11.9 0.1 1.8 1 1 0 1 1 1 0 PaaX-like protein C-terminal domain EF-hand_1 PF00036.32 ORF97596 - 6.9e-42 137.9 11.9 1.7e-10 39.6 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF97596 - 1.4e-35 121.6 2.9 4.2e-18 65.6 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF97596 - 2.8e-31 104.7 6.0 1.3e-09 37.2 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF97596 - 3.8e-31 106.7 11.0 8.8e-15 54.3 0.8 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF97596 - 4.6e-27 92.3 9.4 2.3e-06 26.8 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF97596 - 5.3e-16 58.7 0.1 6.4e-09 36.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF97596 - 3e-09 36.8 0.6 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF97596 - 3.9e-08 33.6 0.2 0.0043 17.4 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF97596 - 4.3e-07 30.8 0.0 0.00058 20.7 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF97596 - 2.1e-05 24.5 0.0 0.042 13.9 0.0 3.0 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 ORF97596 - 8.1e-05 22.7 4.0 0.016 15.4 0.4 2.9 1 1 2 3 3 3 2 Dockerin type I domain TerB PF05099.13 ORF97596 - 0.00011 22.1 0.4 0.084 12.8 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB EFhand_Ca_insen PF08726.10 ORF97596 - 0.00012 22.1 1.0 0.00064 19.8 0.2 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF97596 - 0.00053 20.7 0.5 1.2 10.0 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF97596 - 0.001 19.0 0.7 0.46 10.4 0.0 3.4 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF97596 - 0.0025 18.2 0.2 1.6 9.1 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF97596 - 0.0097 16.0 0.1 0.19 11.9 0.0 2.2 2 0 0 2 2 2 1 Transcription factor MotA, activation domain YqeY PF09424.10 ORF97596 - 0.012 15.7 0.3 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein SurA_N_2 PF13623.6 ORF97596 - 0.015 15.2 0.5 0.93 9.4 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain Poly_export PF02563.16 ORF97596 - 0.021 15.0 0.1 6.7 7.0 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein DUF5580 PF17743.1 ORF97596 - 0.027 13.0 0.0 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_14 PF17959.1 ORF97596 - 0.052 13.9 0.1 11 6.4 0.0 2.4 1 1 0 2 2 2 0 EF-hand domain Fe_hyd_lg_C PF02906.14 ORF97596 - 0.053 13.2 0.5 0.13 11.9 0.5 1.7 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF97596 - 0.06 12.5 0.0 4.6 6.3 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF97596 - 0.078 11.6 0.1 2.1 6.8 0.0 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF97596 - 0.082 13.4 0.0 6.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF97596 - 0.12 12.3 2.7 4.2 7.3 0.2 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF97596 - 0.12 12.4 2.6 27 4.9 0.1 3.5 4 0 0 4 4 4 0 Saposin-like type B, region 1 RBFA PF02033.18 ORF97462 - 0.038 14.5 0.7 0.064 13.7 0.6 1.5 1 1 0 1 1 1 0 Ribosome-binding factor A ATP-synt_E_2 PF08112.11 ORF97462 - 0.095 13.0 10.4 2.4 8.5 4.0 2.8 1 1 1 2 2 2 0 ATP synthase epsilon subunit CIDR1_gamma PF18562.1 ORF97462 - 0.78 9.9 0.1 0.78 9.9 0.1 2.8 3 1 1 4 4 4 0 Cysteine-Rich Interdomain Region 1 gamma AlaE PF06610.13 ORF96913 - 8.1e-67 223.6 6.3 9.2e-67 223.4 6.3 1.0 1 0 0 1 1 1 1 L-alanine exporter ATPase_gene1 PF09527.10 ORF96913 - 0.0047 17.1 0.6 0.016 15.3 0.1 2.1 2 0 0 2 2 2 1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter LapA_dom PF06305.11 ORF96913 - 0.11 12.4 1.4 1.6 8.6 0.0 2.5 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain DnaJ PF00226.31 ORF96482 - 1.7e-11 44.0 0.1 3.3e-11 43.2 0.1 1.3 1 0 0 1 1 1 1 DnaJ domain DASH_Spc19 PF08287.11 ORF96482 - 0.0027 17.6 0.3 0.004 17.0 0.3 1.3 1 0 0 1 1 1 1 Spc19 MADF_DNA_bdg PF10545.9 ORF96482 - 0.012 15.9 1.1 0.028 14.7 1.1 1.7 1 1 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like NEMO PF11577.8 ORF96482 - 0.028 14.4 2.4 0.1 12.6 0.5 2.2 2 0 0 2 2 2 0 NF-kappa-B essential modulator NEMO TT_ORF2 PF02957.15 ORF96482 - 0.071 14.0 1.8 0.092 13.7 1.8 1.2 1 0 0 1 1 1 0 TT viral ORF2 RNase_J_C PF17770.1 ORF95776 - 0.13 13.3 2.6 7 7.8 0.1 3.0 1 1 0 2 2 2 0 Ribonuclease J C-terminal domain Vta1_C PF18097.1 ORF95517 - 1e-06 28.3 0.4 1.4e-06 27.8 0.4 1.2 1 0 0 1 1 1 1 Vta1 C-terminal domain CCDC24 PF15669.5 ORF95517 - 0.012 15.5 0.7 0.017 15.0 0.7 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family DUF4041 PF13250.6 ORF95517 - 0.022 14.7 0.5 0.035 14.0 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) D123 PF07065.14 ORF95517 - 0.069 12.3 5.9 1.2 8.2 0.1 2.1 2 0 0 2 2 2 0 D123 Paramyxo_NS_C PF02725.14 ORF95517 - 0.15 12.2 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Non-structural protein C CDC45 PF02724.14 ORF95517 - 0.15 10.3 8.4 0.15 10.3 8.4 1.1 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 ORF95517 - 0.17 11.7 7.8 0.19 11.6 7.8 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 BEX PF04538.12 ORF95517 - 0.29 11.8 15.9 0.026 15.1 11.0 1.6 2 0 0 2 2 2 0 Brain expressed X-linked like family TonB_N PF16031.5 ORF95517 - 0.41 11.2 14.2 0.11 13.0 10.8 1.8 2 0 0 2 2 2 0 TonB polyproline region Herpes_DNAp_acc PF04929.12 ORF95517 - 0.44 9.5 10.5 0.55 9.1 10.5 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Neur_chan_memb PF02932.16 ORF95517 - 0.57 10.2 3.2 0.64 10.0 3.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DNA_pol_phi PF04931.13 ORF95517 - 2.8 6.0 11.7 3.4 5.6 11.7 1.1 1 0 0 1 1 1 0 DNA polymerase phi Striatin PF08232.12 ORF95517 - 5.3 7.6 10.1 3.5 8.2 8.3 1.5 1 1 0 2 2 2 0 Striatin family DUF3391 PF11871.8 ORF95517 - 5.4 7.6 9.4 0.62 10.6 5.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) DUF3784 PF12650.7 ORF95173 - 0.017 15.3 7.6 0.097 12.9 3.7 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3784) MFS_1 PF07690.16 ORF95173 - 0.92 8.4 14.7 0.95 8.3 9.9 2.0 1 1 1 2 2 2 0 Major Facilitator Superfamily PROL5-SMR PF15621.6 ORF94099 - 0.25 11.9 4.9 0.41 11.2 4.9 1.5 1 1 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Ribosomal_L27A PF00828.19 ORF93051 - 6.6e-23 81.8 0.2 9e-23 81.3 0.2 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Hexapep PF00132.24 ORF9226 - 5.5e-07 29.1 1.5 0.00038 20.1 1.4 3.1 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF9226 - 0.53 10.1 2.1 2.3 8.1 0.9 2.4 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 ORF92202 - 5.5e-07 29.1 1.5 0.00038 20.1 1.4 3.1 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF92202 - 0.53 10.1 2.1 2.3 8.1 0.9 2.4 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase DUF2062 PF09835.9 ORF91423 - 0.018 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Aa_trans PF01490.18 ORF91423 - 0.033 12.9 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF91423 - 0.043 14.1 0.6 0.087 13.1 0.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal Aldo_ket_red PF00248.21 ORF91412 - 0.016 14.4 0.2 0.018 14.2 0.2 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family Ank_5 PF13857.6 ORF90875 - 1.9e-12 47.1 5.8 1.9e-06 28.1 0.4 3.3 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF90875 - 2e-12 47.5 1.0 2.5e-09 37.6 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF90875 - 3.8e-09 36.6 2.9 6.2e-05 23.3 0.1 3.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 ORF90875 - 7.5e-09 35.1 1.2 0.0081 16.6 0.0 4.2 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF90875 - 1.9e-08 34.7 0.3 3.4e-07 30.7 0.2 2.8 3 0 0 3 3 3 1 Ankyrin repeats (many copies) DUF2062 PF09835.9 ORF88398 - 0.018 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Aa_trans PF01490.18 ORF88398 - 0.033 12.9 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF88398 - 0.043 14.1 0.6 0.087 13.1 0.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal Slx4 PF09494.10 ORF86736 - 8.3e-07 28.9 0.0 1.2e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Slx4 endonuclease KIP1 PF07765.12 ORF86736 - 0.06 13.5 1.5 0.11 12.7 1.5 1.4 1 0 0 1 1 1 0 KIP1-like protein PHM7_cyt PF14703.6 ORF86736 - 0.069 13.4 5.8 0.088 13.0 5.8 1.2 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Seryl_tRNA_N PF02403.22 ORF86736 - 9 6.6 11.3 3.7 7.8 7.1 2.0 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Uteroglobin PF01099.17 ORF86497 - 0.16 12.3 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 Uteroglobin family BORCS7 PF16088.5 ORF86257 - 0.064 13.5 6.6 0.15 12.4 6.6 1.6 1 1 0 1 1 1 0 BLOC-1-related complex sub-unit 7 CCDC84 PF14968.6 ORF86257 - 0.26 10.9 9.8 0.29 10.7 9.8 1.1 1 0 0 1 1 1 0 Coiled coil protein 84 DUF1664 PF07889.12 ORF86257 - 0.26 11.3 8.7 0.11 12.6 4.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF725 PF05267.12 ORF86257 - 0.3 11.1 8.8 12 6.0 8.8 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF725) LRRFIP PF09738.9 ORF86257 - 1.1 8.7 19.8 0.068 12.6 4.0 2.0 1 1 1 2 2 2 0 LRRFIP family Ribosomal_L6e PF01159.19 ORF86257 - 4.7 7.8 12.4 1.6 9.3 9.3 1.8 1 1 0 1 1 1 0 Ribosomal protein L6e RusA PF05866.11 ORF86257 - 7.6 7.1 13.0 77 3.9 13.0 2.1 1 1 0 1 1 1 0 Endodeoxyribonuclease RusA DUF2919 PF11143.8 ORF85472 - 6.1e-48 162.9 8.4 6.8e-48 162.7 8.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2919) LysM PF01476.20 ORF85427 - 1e-14 54.3 0.0 2.2e-14 53.2 0.0 1.6 1 0 0 1 1 1 1 LysM domain BON PF04972.17 ORF85427 - 6.7e-10 39.1 3.6 1.1e-09 38.4 3.6 1.3 1 0 0 1 1 1 1 BON domain HMA PF00403.26 ORF85427 - 0.01 16.3 0.6 0.023 15.2 0.4 1.8 1 1 1 2 2 2 0 Heavy-metal-associated domain LA-virus_coat PF09220.10 ORF85427 - 0.13 10.9 0.0 0.15 10.6 0.0 1.1 1 0 0 1 1 1 0 L-A virus, major coat protein Glyco_hydr_30_2 PF14587.6 ORF85356 - 0.024 14.2 0.6 0.024 14.2 0.6 1.1 1 0 0 1 1 1 0 O-Glycosyl hydrolase family 30 Glyco_hydr_30_2 PF14587.6 ORF84818 - 0.024 14.2 0.6 0.024 14.2 0.6 1.1 1 0 0 1 1 1 0 O-Glycosyl hydrolase family 30 Popeye PF04831.13 ORF83469 - 3.7 7.7 8.1 2.5 8.2 6.8 1.4 1 1 0 1 1 1 0 Popeye protein conserved region ATP-gua_Ptrans PF00217.19 ORF8340 - 0.00093 18.7 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 ATP:guanido phosphotransferase, C-terminal catalytic domain Dpy-30 PF05186.13 ORF8340 - 0.065 12.9 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Dpy-30 motif Peptidase_S13 PF02113.15 ORF8340 - 0.12 11.0 0.0 0.16 10.6 0.0 1.1 1 0 0 1 1 1 0 D-Ala-D-Ala carboxypeptidase 3 (S13) family Recep_L_domain PF01030.24 ORF81859 - 0.045 13.9 1.1 0.071 13.2 0.5 1.6 1 1 0 1 1 1 0 Receptor L domain DUF4203 PF13886.6 ORF81504 - 9.6e-12 45.0 10.4 1.1e-11 44.8 10.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) DUF373 PF04123.13 ORF81504 - 0.022 14.2 2.6 0.029 13.8 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) LST1 PF05083.13 ORF81504 - 0.067 13.5 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 LST-1 protein PepSY_TM_like_2 PF16357.5 ORF81504 - 0.14 12.1 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Putative PepSY_TM-like Saf_2TM PF18303.1 ORF81504 - 0.26 10.9 0.2 0.26 10.9 0.2 2.0 1 1 2 3 3 3 0 SAVED-fused 2TM effector domain Claudin_2 PF13903.6 ORF81504 - 0.43 10.3 5.1 0.55 9.9 5.1 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF2062 PF09835.9 ORF81434 - 0.018 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Aa_trans PF01490.18 ORF81434 - 0.033 12.9 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF81434 - 0.043 14.1 0.6 0.087 13.1 0.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DB_JBP1 PF18526.1 ORF79364 - 0.017 15.1 0.3 0.036 14.0 0.3 1.7 1 1 0 1 1 1 0 Thymine dioxygenase JBP1 DNA-binding domain BRX PF08381.11 ORF79364 - 0.34 10.3 3.4 0.23 10.9 0.5 2.1 2 0 0 2 2 2 0 Transcription factor regulating root and shoot growth via Pin3 EamA PF00892.20 ORF79200 - 9.3e-09 35.6 10.5 1.1e-08 35.4 10.5 1.0 1 0 0 1 1 1 1 EamA-like transporter family PrgI PF12666.7 ORF79200 - 0.17 12.6 5.0 0.37 11.5 0.8 2.2 2 0 0 2 2 2 0 PrgI family protein DUF3228 PF11539.8 ORF7862 - 0.059 12.9 0.0 0.077 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3228) NAD_binding_1 PF00175.21 ORF78400 - 0.0078 16.8 0.0 0.26 12.0 0.0 2.1 2 0 0 2 2 2 2 Oxidoreductase NAD-binding domain Hexapep PF00132.24 ORF78059 - 5.5e-07 29.1 1.5 0.00038 20.1 1.4 3.1 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF78059 - 0.53 10.1 2.1 2.3 8.1 0.9 2.4 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase HMMR_N PF15905.5 ORF73489 - 0.026 14.0 16.0 0.03 13.8 16.0 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF4140 PF13600.6 ORF73489 - 0.041 14.3 6.0 0.076 13.5 0.3 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) CrtC PF07143.11 ORF73489 - 0.046 14.4 0.4 0.064 13.9 0.4 1.2 1 0 0 1 1 1 0 CrtC N-terminal lipocalin domain DUF1043 PF06295.12 ORF73489 - 0.47 10.5 11.4 1.3 9.0 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) NiFeSe_Hases PF00374.19 ORF72712 - 2.4e-53 181.8 0.3 2.7e-53 181.6 0.3 1.0 1 0 0 1 1 1 1 Nickel-dependent hydrogenase DOPA_dioxygen PF08883.11 ORF72409 - 0.17 12.1 0.0 3 8.1 0.0 2.0 2 0 0 2 2 2 0 Dopa 4,5-dioxygenase family Hexapep PF00132.24 ORF7204 - 5.5e-07 29.1 1.5 0.00038 20.1 1.4 3.1 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF7204 - 0.53 10.1 2.1 2.3 8.1 0.9 2.4 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase TPH PF13868.6 ORF72025 - 0.0029 16.2 31.9 0.0038 15.8 31.9 1.2 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF2924 PF11149.8 ORF72025 - 0.0091 16.4 7.0 0.0091 16.4 7.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2924) VTC PF09359.10 ORF72025 - 0.88 8.9 13.6 1.2 8.5 13.6 1.2 1 0 0 1 1 1 0 VTC domain RNA_pol_Rbc25 PF08292.12 ORF72025 - 8.5 6.6 9.7 8.5 6.6 8.6 1.6 1 1 1 2 2 2 0 RNA polymerase III subunit Rpc25 DUF4694 PF15765.5 ORF71916 - 0.015 15.4 0.8 2.5 8.1 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4694) CAF1A PF12253.8 ORF71665 - 0.14 12.3 6.4 0.2 11.8 6.4 1.2 1 0 0 1 1 1 0 Chromatin assembly factor 1 subunit A DUF386 PF04074.12 ORF71551 - 1.6e-24 86.5 0.5 1.8e-24 86.3 0.5 1.0 1 0 0 1 1 1 1 YhcH/YjgK/YiaL AraC_binding_2 PF14525.6 ORF71551 - 0.0031 17.2 0.0 0.07 12.8 0.0 2.0 2 0 0 2 2 2 1 AraC-binding-like domain EF-hand_7 PF13499.6 ORF7100 - 3e-17 62.8 1.2 6.8e-08 32.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF7100 - 3.5e-10 38.7 5.9 5.5e-08 31.8 0.1 3.6 4 1 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF7100 - 7.9e-10 37.9 2.8 1e-06 28.1 0.1 3.7 2 1 2 4 4 4 2 EF-hand domain EF-hand_9 PF14658.6 ORF7100 - 2.5e-09 37.3 0.2 1.1e-07 32.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 ORF7100 - 1.6e-05 24.7 9.1 0.14 12.0 0.1 4.0 1 1 3 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF7100 - 0.00047 19.5 4.1 0.0014 18.1 0.3 3.2 3 0 0 3 3 3 1 EF hand Tsc35 PF15079.6 ORF7100 - 0.0028 17.3 2.9 0.24 10.9 1.7 2.2 2 0 0 2 2 2 2 Testis-specific protein 35 EF-hand_4 PF12763.7 ORF7100 - 0.03 14.3 4.3 3.6 7.6 0.6 2.6 1 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF7100 - 0.032 14.5 0.5 4.4 7.6 0.0 2.2 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region IL13 PF03487.13 ORF7100 - 0.11 12.3 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 Interleukin-13 DUF3349 PF11829.8 ORF7100 - 0.19 12.5 2.1 0.83 10.5 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) Vta1_C PF18097.1 ORF69364 - 1e-06 28.3 0.4 1.4e-06 27.8 0.4 1.2 1 0 0 1 1 1 1 Vta1 C-terminal domain CCDC24 PF15669.5 ORF69364 - 0.012 15.5 0.7 0.017 15.0 0.7 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family DUF4041 PF13250.6 ORF69364 - 0.022 14.7 0.5 0.035 14.0 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) D123 PF07065.14 ORF69364 - 0.069 12.3 5.9 1.2 8.2 0.1 2.1 2 0 0 2 2 2 0 D123 Paramyxo_NS_C PF02725.14 ORF69364 - 0.15 12.2 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Non-structural protein C CDC45 PF02724.14 ORF69364 - 0.15 10.3 8.4 0.15 10.3 8.4 1.1 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 ORF69364 - 0.17 11.7 7.8 0.19 11.6 7.8 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 BEX PF04538.12 ORF69364 - 0.29 11.8 15.9 0.026 15.1 11.0 1.6 2 0 0 2 2 2 0 Brain expressed X-linked like family TonB_N PF16031.5 ORF69364 - 0.41 11.2 14.2 0.11 13.0 10.8 1.8 2 0 0 2 2 2 0 TonB polyproline region Herpes_DNAp_acc PF04929.12 ORF69364 - 0.44 9.5 10.5 0.55 9.1 10.5 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Neur_chan_memb PF02932.16 ORF69364 - 0.57 10.2 3.2 0.64 10.0 3.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DNA_pol_phi PF04931.13 ORF69364 - 2.8 6.0 11.7 3.4 5.6 11.7 1.1 1 0 0 1 1 1 0 DNA polymerase phi Striatin PF08232.12 ORF69364 - 5.3 7.6 10.1 3.5 8.2 8.3 1.5 1 1 0 2 2 2 0 Striatin family DUF3391 PF11871.8 ORF69364 - 5.4 7.6 9.4 0.62 10.6 5.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) DUF4875 PF16175.5 ORF68909 - 0.068 13.3 0.2 0.11 12.6 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4875) Oxysterol_BP PF01237.18 ORF68623 - 4.1e-21 75.3 0.4 4.7e-21 75.0 0.4 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein ABC_membrane PF00664.23 ORF67832 - 0.00066 19.4 3.5 0.00066 19.4 3.5 1.7 1 1 1 2 2 2 1 ABC transporter transmembrane region SfsA PF03749.13 ORF67832 - 0.06 13.3 0.0 0.2 11.5 0.0 1.8 2 0 0 2 2 2 0 Sugar fermentation stimulation protein RE domain GA-like PF17573.2 ORF67832 - 0.17 11.8 0.1 0.31 11.0 0.1 1.3 1 0 0 1 1 1 0 GA-like domain EII-Sor PF03609.14 ORF67832 - 0.25 10.7 7.0 0.67 9.3 7.0 1.6 1 1 0 1 1 1 0 PTS system sorbose-specific iic component CS PF04969.16 ORF67551 - 1e-08 36.0 0.0 1.5e-08 35.6 0.0 1.3 1 0 0 1 1 1 1 CS domain DUF4955 PF16315.5 ORF67551 - 0.15 12.3 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4955) DUF3136 PF11334.8 ORF67442 - 0.068 13.0 0.1 0.19 11.6 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3136) CS PF04969.16 ORF66496 - 1e-08 36.0 0.0 1.5e-08 35.6 0.0 1.3 1 0 0 1 1 1 1 CS domain DUF4955 PF16315.5 ORF66496 - 0.15 12.3 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4955) SF3a60_bindingd PF12108.8 ORF64993 - 0.014 15.3 0.1 0.024 14.5 0.1 1.4 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain Ribosomal_L9_C PF03948.14 ORF64782 - 1.6e-25 89.4 1.8 2.6e-25 88.7 1.8 1.4 1 0 0 1 1 1 1 Ribosomal protein L9, C-terminal domain Ribosomal_L9_N PF01281.19 ORF64782 - 1.9e-22 78.5 0.3 3.7e-22 77.6 0.3 1.5 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain FKBP_C PF00254.28 ORF64016 - 3.5e-28 97.8 0.0 4.3e-28 97.5 0.0 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_N PF01346.18 ORF64016 - 0.033 15.1 0.0 0.058 14.4 0.0 1.4 1 0 0 1 1 1 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FAM184 PF15665.5 ORF62741 - 0.043 13.6 19.7 0.26 11.1 11.0 2.1 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B Peptidase_M9_N PF08453.10 ORF62741 - 0.059 13.1 2.5 2.4 7.8 0.1 2.1 2 0 0 2 2 2 0 Peptidase family M9 N-terminal BBP1_C PF15272.6 ORF62741 - 0.15 11.8 23.5 0.24 11.2 23.5 1.2 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal HJURP_C PF12347.8 ORF62741 - 0.22 11.6 0.4 0.22 11.6 0.4 1.8 2 0 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat HIP1_clath_bdg PF16515.5 ORF62741 - 0.67 10.6 19.7 2.2 9.0 3.7 2.7 2 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4407 PF14362.6 ORF62741 - 0.83 9.0 14.4 2.7 7.3 14.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) ApoO PF09769.9 ORF62741 - 0.97 9.4 3.8 1 9.3 0.5 2.2 1 1 1 2 2 2 0 Apolipoprotein O VSG_B PF13206.6 ORF62741 - 1 8.6 10.5 1.3 8.3 10.5 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain V_ATPase_I PF01496.19 ORF62741 - 1.1 7.1 12.0 1.2 6.9 12.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Exonuc_VII_L PF02601.15 ORF62741 - 4.7 6.7 12.1 6 6.3 12.1 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Hexapep PF00132.24 ORF62113 - 5.5e-07 29.1 1.5 0.00038 20.1 1.4 3.1 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF62113 - 0.53 10.1 2.1 2.3 8.1 0.9 2.4 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase Peptidase_C1 PF00112.23 ORF61444 - 4.1e-24 85.9 0.3 5e-24 85.6 0.3 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF61444 - 0.0006 19.6 0.0 0.0015 18.3 0.0 1.6 1 1 0 1 1 1 1 Peptidase family C1 propeptide DUF667 PF05018.13 ORF59680 - 4.2e-60 202.6 1.8 5e-60 202.4 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) Aminotran_3 PF00202.21 ORF59060 - 3.3e-33 114.9 0.0 3.7e-33 114.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Oxysterol_BP PF01237.18 ORF57376 - 4.1e-21 75.3 0.4 4.7e-21 75.0 0.4 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein DUF1730 PF08331.10 ORF57041 - 0.054 13.4 0.0 0.084 12.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1730) HTH_1 PF00126.27 ORF57041 - 0.3 11.1 3.3 7.4 6.6 0.7 2.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family EF-hand_7 PF13499.6 ORF56282 - 8.2e-17 61.4 1.5 6.8e-08 32.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF56282 - 5e-10 38.2 5.4 5.5e-08 31.8 0.1 3.4 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF56282 - 1.4e-09 37.1 2.6 1e-06 28.1 0.1 3.5 2 1 2 4 4 4 2 EF-hand domain EF-hand_9 PF14658.6 ORF56282 - 2.4e-09 37.4 0.3 1.1e-07 32.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 ORF56282 - 6.1e-05 22.8 9.9 0.14 12.0 0.1 4.0 1 1 4 5 5 5 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF56282 - 0.00019 20.8 1.8 0.0014 18.1 0.3 2.8 2 0 0 2 2 2 1 EF hand Tsc35 PF15079.6 ORF56282 - 0.0028 17.2 2.9 0.24 10.9 1.7 2.2 2 0 0 2 2 2 2 Testis-specific protein 35 IL13 PF03487.13 ORF56282 - 0.11 12.2 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 Interleukin-13 DUF3349 PF11829.8 ORF56282 - 0.19 12.5 2.1 0.83 10.5 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) SPARC_Ca_bdg PF10591.9 ORF56282 - 0.22 11.8 0.6 4.4 7.6 0.0 2.2 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region IBR PF01485.21 ORF55765 - 0.012 15.8 2.4 0.016 15.4 2.4 1.2 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Amidohydro_3 PF07969.11 ORF54510 - 0.044 13.2 0.1 0.051 13.0 0.1 1.1 1 0 0 1 1 1 0 Amidohydrolase family fn3 PF00041.21 ORF53221 - 0.0031 17.8 0.0 0.0064 16.8 0.0 1.5 1 0 0 1 1 1 1 Fibronectin type III domain RCC1_2 PF13540.6 ORF53221 - 0.068 13.0 2.6 0.1 12.5 0.1 2.3 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF53221 - 0.14 12.8 0.0 0.22 12.2 0.0 1.5 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat Toxin_7 PF05980.12 ORF53221 - 0.24 11.7 0.5 32 4.9 0.0 2.3 2 0 0 2 2 2 0 Toxin 7 TMF_DNA_bd PF12329.8 ORF52965 - 0.1 12.6 1.1 0.15 12.0 1.1 1.2 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Hexapep PF00132.24 ORF52391 - 5.5e-07 29.1 1.5 0.00038 20.1 1.4 3.1 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF52391 - 0.53 10.1 2.1 2.3 8.1 0.9 2.4 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase SPACA9 PF15120.6 ORF52116 - 0.013 15.3 4.9 0.018 14.8 4.9 1.2 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 DUF2508 PF10704.9 ORF52116 - 0.031 14.4 7.9 0.031 14.4 7.9 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF2508) ERM PF00769.19 ORF52116 - 0.16 11.8 27.0 0.34 10.7 27.0 1.5 1 1 0 1 1 1 0 Ezrin/radixin/moesin family Spc7 PF08317.11 ORF52116 - 0.2 10.5 23.2 0.3 9.9 23.2 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF3584 PF12128.8 ORF52116 - 0.3 8.6 21.4 0.35 8.3 21.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) STN1_2 PF09170.10 ORF52116 - 0.35 11.1 11.5 0.43 10.8 11.5 1.1 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 Yuri_gagarin PF15934.5 ORF52116 - 0.51 10.1 17.8 1.6 8.5 17.9 1.6 1 1 0 1 1 1 0 Yuri gagarin CC2-LZ PF16516.5 ORF52116 - 1.2 9.5 24.2 1.8 9.0 12.8 2.2 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator KxDL PF10241.9 ORF52116 - 1.3 9.3 17.4 0.56 10.5 7.7 2.5 1 1 0 2 2 2 0 Uncharacterized conserved protein Atg14 PF10186.9 ORF52116 - 1.6 7.8 25.3 12 4.9 16.2 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2570 PF10828.8 ORF52116 - 1.7 8.5 20.8 0.36 10.7 12.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) Mod_r PF07200.13 ORF52116 - 2.1 8.5 25.4 0.12 12.5 17.2 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein HIP1_clath_bdg PF16515.5 ORF52116 - 2.3 8.9 24.8 4.1 8.1 2.1 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CorA PF01544.18 ORF52116 - 3.1 7.0 10.5 3.1 7.0 9.1 1.5 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein AAA_23 PF13476.6 ORF52116 - 3.8 8.0 27.6 5.8 7.4 27.6 1.4 1 0 0 1 1 1 0 AAA domain TEX13 PF15186.6 ORF52116 - 3.9 7.1 14.5 5.6 6.6 13.8 1.6 1 1 1 2 2 2 0 Testis-expressed sequence 13 protein family LPD5 PF18799.1 ORF52116 - 4.2 7.8 17.2 8.9 6.7 17.2 1.6 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 PTS_IIA PF02255.16 ORF52116 - 4.2 7.5 11.4 0.34 11.0 5.8 2.1 2 1 1 3 3 3 0 PTS system, Lactose/Cellobiose specific IIA subunit Fib_alpha PF08702.10 ORF52116 - 4.5 7.5 21.2 2.7 8.2 10.3 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Sulfatase_C PF14707.6 ORF52116 - 4.8 7.9 9.3 6 7.6 2.4 2.4 1 1 2 3 3 3 0 C-terminal region of aryl-sulfatase GAS PF13851.6 ORF52116 - 4.9 6.4 33.5 89 2.3 33.6 2.0 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding FapA PF03961.13 ORF52116 - 8.4 4.9 25.6 3.5 6.1 16.4 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF4407 PF14362.6 ORF52116 - 9.1 5.5 15.6 12 5.1 15.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) BST2 PF16716.5 ORF52116 - 9.9 6.8 23.2 9.1 6.9 13.8 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Hexapep PF00132.24 ORF52049 - 5.5e-07 29.1 1.5 0.00038 20.1 1.4 3.1 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF52049 - 0.53 10.1 2.1 2.3 8.1 0.9 2.4 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase Acyl_transf_3 PF01757.22 ORF51685 - 0.027 13.6 1.9 0.031 13.3 1.9 1.1 1 0 0 1 1 1 0 Acyltransferase family Sulfatase_C PF14707.6 ORF51568 - 0.0012 19.5 0.0 0.0029 18.3 0.0 1.6 2 0 0 2 2 2 1 C-terminal region of aryl-sulfatase DUF4976 PF16347.5 ORF51568 - 0.0047 17.2 0.0 0.028 14.7 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4976) PPP4R2 PF09184.11 ORF51546 - 0.017 14.7 29.8 0.02 14.5 29.8 1.1 1 0 0 1 1 1 0 PPP4R2 BUD22 PF09073.10 ORF51546 - 0.022 14.2 29.3 0.024 14.0 29.3 1.2 1 0 0 1 1 1 0 BUD22 CDC27 PF09507.10 ORF51546 - 0.16 11.3 30.6 0.22 10.9 30.6 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 SDA1 PF05285.12 ORF51546 - 0.68 9.3 32.2 0.85 9.0 32.2 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF51546 - 0.7 8.0 34.0 0.75 7.9 34.0 1.1 1 0 0 1 1 1 0 Nop14-like family DUF913 PF06025.12 ORF51546 - 1.3 7.9 12.0 1.5 7.7 12.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) CNDH2_C PF16858.5 ORF51546 - 1.5 8.7 14.6 1.7 8.5 14.6 1.1 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term TFIIA PF03153.13 ORF51546 - 3.7 7.5 34.2 4.6 7.1 34.2 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit NPR3 PF03666.13 ORF51546 - 4.7 5.9 13.6 4.5 6.0 13.6 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 FAM60A PF15396.6 ORF51546 - 8.9 6.3 8.0 11 5.9 8.0 1.4 1 0 0 1 1 1 0 Protein Family FAM60A DUF3399 PF11879.8 ORF51163 - 0.083 13.2 0.1 0.18 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) PPP4R2 PF09184.11 ORF50883 - 0.017 14.7 29.8 0.02 14.5 29.8 1.1 1 0 0 1 1 1 0 PPP4R2 BUD22 PF09073.10 ORF50883 - 0.02 14.3 29.3 0.022 14.1 29.3 1.2 1 0 0 1 1 1 0 BUD22 CDC27 PF09507.10 ORF50883 - 0.15 11.4 30.2 0.21 11.0 30.2 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 SDA1 PF05285.12 ORF50883 - 0.55 9.6 31.4 0.69 9.3 31.4 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF50883 - 0.69 8.0 33.9 0.73 8.0 33.9 1.1 1 0 0 1 1 1 0 Nop14-like family CNDH2_C PF16858.5 ORF50883 - 1.4 8.7 14.5 1.6 8.5 14.5 1.1 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term DUF913 PF06025.12 ORF50883 - 1.5 7.8 11.8 1.6 7.6 11.8 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) TFIIA PF03153.13 ORF50883 - 3.1 7.7 34.6 3.8 7.4 34.6 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit NPR3 PF03666.13 ORF50883 - 5 5.8 13.5 4.7 5.9 13.5 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Hexapep PF00132.24 ORF50234 - 5.5e-07 29.1 1.5 0.00038 20.1 1.4 3.1 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF50234 - 0.53 10.1 2.1 2.3 8.1 0.9 2.4 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase DUF1199 PF06712.11 ORF49789 - 0.12 12.4 0.6 11 6.2 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1199) DUF4200 PF13863.6 ORF49275 - 0.84 10.0 8.8 0.45 10.9 0.4 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) Ni_hydr_CYTB PF01292.20 ORF47938 - 6.9e-08 32.3 9.0 8.8e-08 32.0 9.0 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 PepSY_TM PF03929.16 ORF47938 - 0.0098 15.6 0.7 0.012 15.3 0.7 1.2 1 0 0 1 1 1 1 PepSY-associated TM region DUF4405 PF14358.6 ORF47938 - 0.11 13.0 12.9 0.25 11.9 12.9 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4405) Tmemb_55A PF09788.9 ORF47938 - 0.44 9.6 1.9 0.57 9.2 1.9 1.1 1 0 0 1 1 1 0 Transmembrane protein 55A DUF3624 PF12292.8 ORF47938 - 2.8 8.4 5.7 4.3 7.8 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3624) ATP-synt_C PF00137.21 ORF47411 - 7.8e-13 48.6 11.7 7.8e-13 48.6 11.7 3.2 3 0 0 3 3 3 2 ATP synthase subunit C EF-hand_7 PF13499.6 ORF47221 - 4.7e-05 23.7 4.9 0.00011 22.6 4.9 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF47221 - 0.0024 17.3 3.6 0.37 10.4 0.6 2.8 2 1 0 2 2 2 2 EF hand Myb_DNA-bind_3 PF12776.7 ORF47221 - 0.0031 18.4 0.4 0.0048 17.9 0.4 1.4 1 0 0 1 1 1 1 Myb/SANT-like DNA-binding domain DUF3340 PF11818.8 ORF47221 - 0.025 14.8 0.5 0.029 14.6 0.5 1.3 1 1 0 1 1 1 0 C-terminal domain of tail specific protease (DUF3340) Thioredoxin_8 PF13905.6 ORF47221 - 0.038 14.3 0.5 0.056 13.8 0.5 1.4 1 0 0 1 1 1 0 Thioredoxin-like PTS_IIB PF02302.17 ORF47221 - 0.052 14.2 0.0 0.099 13.4 0.0 1.5 1 1 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIB subunit DUF4248 PF14053.6 ORF47221 - 0.058 13.4 0.1 0.14 12.2 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4248) EF-hand_6 PF13405.6 ORF47221 - 0.06 13.3 4.3 0.49 10.5 1.3 2.7 2 1 1 3 3 3 0 EF-hand domain Spore_GerAC PF05504.11 ORF47221 - 0.084 13.1 1.9 0.41 10.9 1.9 1.9 1 1 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal TAL_FSA PF00923.19 ORF47123 - 0.025 13.9 0.0 0.033 13.5 0.0 1.1 1 0 0 1 1 1 0 Transaldolase/Fructose-6-phosphate aldolase DUF1674 PF07896.12 ORF46937 - 1.9e-08 34.6 1.6 5.3e-08 33.2 1.6 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1674) DUF3902 PF13042.6 ORF45569 - 0.0081 15.8 0.3 0.013 15.1 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3902) Pribosyl_synth PF14572.6 ORF44436 - 8e-30 104.2 0.2 9.1e-30 104.0 0.2 1.0 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 ORF44436 - 6.6e-10 38.7 0.1 8.1e-10 38.4 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF44436 - 0.062 12.7 0.0 0.1 12.0 0.0 1.3 1 1 0 1 1 1 0 Uracil phosphoribosyltransferase DUF4875 PF16175.5 ORF44022 - 0.068 13.3 0.2 0.11 12.6 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4875) PrcB_C PF14343.6 ORF43626 - 0.14 12.3 0.1 0.27 11.4 0.1 1.4 1 0 0 1 1 1 0 PrcB C-terminal tRNA_NucTran2_2 PF13735.6 ORF42707 - 0.015 15.3 0.0 0.023 14.7 0.0 1.2 1 0 0 1 1 1 0 tRNA nucleotidyltransferase domain 2 putative eIF_4G1 PF12152.8 ORF42504 - 0.00035 20.7 0.3 0.00035 20.7 0.3 2.0 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 4G1 Keratin_B2_2 PF13885.6 ORF41916 - 1.6 8.7 11.6 3.2 7.8 11.6 1.5 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein DUF61 PF01886.16 ORF40881 - 0.039 14.0 0.6 0.054 13.5 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF61 DUF4659 PF15558.6 ORF40532 - 0.014 14.3 6.0 0.017 14.0 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4659) DUF16 PF01519.16 ORF40532 - 0.017 15.6 8.4 0.78 10.3 4.5 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF16 Tfb2_C PF18307.1 ORF40532 - 0.018 15.4 0.1 0.034 14.6 0.1 1.4 1 0 0 1 1 1 0 Transcription factor Tfb2 (p52) C-terminal domain TaqI_C PF12950.7 ORF40532 - 0.042 13.9 0.9 0.051 13.7 0.9 1.2 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain DUF2203 PF09969.9 ORF40532 - 0.068 13.9 2.5 0.095 13.4 2.5 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) PhoQ_Sensor PF08918.10 ORF40532 - 0.11 12.4 1.3 0.14 12.0 1.3 1.2 1 0 0 1 1 1 0 PhoQ Sensor DUF2062 PF09835.9 ORF3840 - 0.018 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Aa_trans PF01490.18 ORF3840 - 0.033 12.9 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF3840 - 0.043 14.1 0.6 0.087 13.1 0.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal PPR_2 PF13041.6 ORF38167 - 1.7e-17 63.3 0.0 1.9e-08 34.4 0.0 2.3 2 0 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF38167 - 9.9e-17 60.8 0.0 8.2e-08 32.2 0.0 2.1 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF38167 - 3.5e-09 36.2 3.3 0.2 11.4 0.0 4.8 5 1 0 5 5 5 4 PPR repeat PPR PF01535.20 ORF38167 - 1.9e-06 27.7 0.0 0.012 15.9 0.0 2.8 2 0 0 2 2 2 2 PPR repeat His_Phos_1 PF00300.22 ORF3761 - 1e-09 38.4 0.0 1.4e-09 37.9 0.0 1.3 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PIP5K PF01504.18 ORF37375 - 5.2e-16 58.7 0.2 6.5e-16 58.4 0.2 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Pyr_redox_2 PF07992.14 ORF36493 - 0.00019 20.7 0.0 0.00024 20.5 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase zf-RING_11 PF17123.5 ORF36443 - 4.7e-13 48.6 3.3 8.3e-13 47.8 3.3 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF36443 - 2.2e-12 47.1 5.4 2.2e-12 47.1 5.4 1.4 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF36443 - 1.4e-07 31.2 6.0 1.4e-07 31.2 6.0 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF36443 - 2.9e-07 30.3 4.8 5e-07 29.5 4.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF36443 - 6.7e-07 29.5 6.1 1.6e-06 28.2 6.1 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF36443 - 8.9e-06 25.6 5.8 8.9e-06 25.6 5.8 1.6 2 0 0 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF36443 - 2.3e-05 24.3 0.7 4e-05 23.6 0.7 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF36443 - 0.00032 20.6 3.6 0.00032 20.6 3.6 1.5 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF36443 - 0.00033 20.4 4.4 0.00049 19.9 4.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF36443 - 0.0012 18.4 2.5 0.0021 17.6 2.5 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF36443 - 0.0027 17.5 3.9 0.0052 16.6 3.9 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF36443 - 0.0048 17.0 1.7 0.011 15.8 1.7 1.6 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING RINGv PF12906.7 ORF36443 - 0.0094 16.1 2.5 0.0094 16.1 2.5 1.8 2 1 0 2 2 1 1 RING-variant domain zf-HC5HC2H_2 PF13832.6 ORF36443 - 0.016 15.3 2.1 0.024 14.8 2.1 1.3 1 0 0 1 1 1 0 PHD-zinc-finger like domain zf-Nse PF11789.8 ORF36443 - 0.052 13.4 1.6 0.083 12.7 1.6 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Baculo_RING PF05883.11 ORF36443 - 0.082 12.9 0.4 0.12 12.4 0.4 1.2 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-C3H2C3 PF17122.5 ORF36443 - 0.15 12.1 2.2 0.27 11.3 2.2 1.6 1 0 0 1 1 1 0 Zinc-finger DUF2062 PF09835.9 ORF3579 - 0.018 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Aa_trans PF01490.18 ORF3579 - 0.033 12.9 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF3579 - 0.043 14.1 0.6 0.087 13.1 0.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal Hexapep PF00132.24 ORF35343 - 5.5e-07 29.1 1.5 0.00038 20.1 1.4 3.1 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF35343 - 0.53 10.1 2.1 2.3 8.1 0.9 2.4 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase EF-hand_1 PF00036.32 ORF33279 - 5.2e-42 138.3 10.2 1.2e-10 40.2 0.6 4.1 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF33279 - 1.4e-35 121.5 2.5 4.8e-18 65.4 0.9 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF33279 - 9.7e-32 108.6 11.1 6.1e-15 54.8 0.7 4.0 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF33279 - 7.1e-31 103.5 5.2 1.3e-09 37.2 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF33279 - 9.9e-27 91.2 7.3 2.3e-06 26.8 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF33279 - 6.1e-16 58.5 0.2 6.4e-09 36.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF33279 - 7.9e-09 35.4 0.5 0.00031 20.6 0.1 2.3 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF33279 - 7.2e-08 32.7 0.0 0.0059 16.9 0.0 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF33279 - 4.8e-07 30.6 0.0 0.0008 20.3 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF33279 - 1.5e-05 24.9 0.0 0.042 13.9 0.0 3.0 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0154) TerB PF05099.13 ORF33279 - 0.00025 21.0 0.1 0.095 12.7 0.0 2.2 1 1 1 2 2 2 1 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF33279 - 0.00037 20.6 4.4 0.052 13.8 0.4 2.8 1 1 2 3 3 3 2 Dockerin type I domain Caleosin PF05042.13 ORF33279 - 0.00074 19.5 0.4 0.48 10.3 0.0 3.4 1 1 3 4 4 4 1 Caleosin related protein DUF3349 PF11829.8 ORF33279 - 0.0009 20.0 0.4 1.8 9.4 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) DUF1103 PF06513.11 ORF33279 - 0.0044 16.7 0.9 0.0053 16.4 0.9 1.1 1 0 0 1 1 1 1 Repeat of unknown function (DUF1103) EFhand_Ca_insen PF08726.10 ORF33279 - 0.0054 16.8 0.7 0.024 14.7 0.2 2.2 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF4497 PF14924.6 ORF33279 - 0.0077 16.7 0.0 3.4 8.2 0.0 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF4497) SurA_N_2 PF13623.6 ORF33279 - 0.011 15.6 0.4 0.8 9.6 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain Poly_export PF02563.16 ORF33279 - 0.011 15.9 0.1 1.3 9.3 0.0 3.1 1 1 0 2 2 2 0 Polysaccharide biosynthesis/export protein RNA_pol_Rpb4 PF03874.16 ORF33279 - 0.012 15.9 2.3 1.8 8.9 0.2 2.5 3 0 0 3 3 2 0 RNA polymerase Rpb4 DUF853 PF05872.12 ORF33279 - 0.016 13.8 0.1 0.26 9.8 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF5580 PF17743.1 ORF33279 - 0.027 13.0 0.0 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_14 PF17959.1 ORF33279 - 0.027 14.8 0.1 9.1 6.7 0.0 2.5 1 1 1 2 2 2 0 EF-hand domain YqeY PF09424.10 ORF33279 - 0.044 13.9 0.4 0.24 11.5 0.1 1.9 1 1 1 2 2 2 0 Yqey-like protein Fe_hyd_lg_C PF02906.14 ORF33279 - 0.047 13.4 0.6 0.15 11.7 0.6 1.8 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain SurA_N_3 PF13624.6 ORF33279 - 0.051 13.4 0.1 0.25 11.1 0.0 1.9 1 1 1 2 2 2 0 SurA N-terminal domain MotA_activ PF09114.10 ORF33279 - 0.056 13.6 0.2 1.1 9.4 0.0 2.2 2 1 0 2 2 2 0 Transcription factor MotA, activation domain TetR_C_7 PF14246.6 ORF33279 - 0.073 13.1 0.0 7.2 6.7 0.0 2.4 2 1 0 2 2 2 0 AefR-like transcriptional repressor, C-terminal domain Ribosomal_L34e PF01199.18 ORF32521 - 4.2e-31 107.1 0.2 4.2e-31 107.1 0.2 1.8 2 0 0 2 2 2 1 Ribosomal protein L34e PAG PF15347.6 ORF32521 - 0.0039 16.3 0.1 0.0047 16.0 0.1 1.0 1 0 0 1 1 1 1 Phosphoprotein associated with glycosphingolipid-enriched BatD PF13584.6 ORF32521 - 0.0079 15.1 0.4 0.013 14.4 0.4 1.3 1 1 0 1 1 1 1 Oxygen tolerance DUF2062 PF09835.9 ORF32278 - 0.018 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Aa_trans PF01490.18 ORF32278 - 0.033 12.9 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF32278 - 0.043 14.1 0.6 0.087 13.1 0.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF1461 PF07314.11 ORF31391 - 0.012 15.6 0.4 0.024 14.5 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1461) DUF4336 PF14234.6 ORF30882 - 0.0008 18.7 0.2 0.13 11.4 0.0 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF4336) DUF2062 PF09835.9 ORF30188 - 0.018 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Aa_trans PF01490.18 ORF30188 - 0.033 12.9 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF30188 - 0.043 14.1 0.6 0.087 13.1 0.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal EF-hand_1 PF00036.32 ORF29380 - 2.8e-24 82.8 12.3 1.8e-06 27.1 0.2 4.9 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF29380 - 8e-21 74.3 4.8 1e-11 45.1 1.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF29380 - 2.4e-19 67.9 14.4 0.00022 20.6 0.6 5.1 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF29380 - 1.8e-18 64.8 7.3 1.1e-05 25.0 0.1 4.7 4 1 1 5 5 5 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF29380 - 1.7e-08 34.7 0.2 0.004 17.5 0.1 2.5 2 2 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF29380 - 3.2e-07 30.1 10.8 0.018 14.9 2.8 4.5 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF29380 - 0.0028 17.6 4.9 1.2 9.1 0.7 3.6 1 1 2 3 3 3 1 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF29380 - 0.02 14.8 0.3 5.7 6.8 0.0 3.1 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF29380 - 0.021 15.0 4.8 12 6.2 4.4 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF29380 - 0.046 14.1 0.0 0.81 10.1 0.0 2.7 2 1 1 3 3 3 0 EF-hand domain Ank_2 PF12796.7 ORF27605 - 1.6e-29 102.3 3.0 4.7e-14 52.7 0.2 2.6 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF27605 - 1.2e-23 83.1 1.4 3.7e-11 43.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF27605 - 9e-23 77.9 0.2 1.1e-05 25.4 0.0 4.4 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF27605 - 8.3e-22 77.0 5.9 6.9e-06 26.2 0.1 4.1 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF27605 - 8.5e-20 70.3 4.2 4.1e-05 23.8 0.1 4.6 5 0 0 5 5 5 4 Ankyrin repeat WPP PF13943.6 ORF27605 - 0.18 12.2 2.1 2.8 8.4 0.3 2.5 1 1 2 3 3 3 0 WPP domain EF-hand_1 PF00036.32 ORF27511 - 6.9e-42 137.9 11.9 1.7e-10 39.6 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF27511 - 1.4e-35 121.6 2.9 4.2e-18 65.6 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF27511 - 2.8e-31 104.7 6.0 1.3e-09 37.2 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF27511 - 3.8e-31 106.7 11.0 8.8e-15 54.3 0.8 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF27511 - 4.6e-27 92.3 9.4 2.3e-06 26.8 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF27511 - 5.3e-16 58.7 0.1 6.4e-09 36.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF27511 - 3e-09 36.8 0.6 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF27511 - 3.9e-08 33.6 0.2 0.0043 17.4 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF27511 - 4.3e-07 30.8 0.0 0.00058 20.7 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF27511 - 2.1e-05 24.5 0.0 0.042 13.9 0.0 3.0 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 ORF27511 - 8.1e-05 22.7 4.0 0.016 15.4 0.4 2.9 1 1 2 3 3 3 2 Dockerin type I domain TerB PF05099.13 ORF27511 - 0.00011 22.1 0.4 0.084 12.8 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB EFhand_Ca_insen PF08726.10 ORF27511 - 0.00012 22.1 1.0 0.00064 19.8 0.2 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF27511 - 0.00053 20.7 0.5 1.2 10.0 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF27511 - 0.001 19.0 0.7 0.46 10.4 0.0 3.4 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF27511 - 0.0025 18.2 0.2 1.6 9.1 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF27511 - 0.0097 16.0 0.1 0.19 11.9 0.0 2.2 2 0 0 2 2 2 1 Transcription factor MotA, activation domain YqeY PF09424.10 ORF27511 - 0.012 15.7 0.3 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein SurA_N_2 PF13623.6 ORF27511 - 0.015 15.2 0.5 0.93 9.4 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain Poly_export PF02563.16 ORF27511 - 0.021 15.0 0.1 6.7 7.0 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein DUF5580 PF17743.1 ORF27511 - 0.027 13.0 0.0 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_14 PF17959.1 ORF27511 - 0.052 13.9 0.1 11 6.4 0.0 2.4 1 1 0 2 2 2 0 EF-hand domain Fe_hyd_lg_C PF02906.14 ORF27511 - 0.053 13.2 0.5 0.13 11.9 0.5 1.7 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF27511 - 0.06 12.5 0.0 4.6 6.3 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF27511 - 0.078 11.6 0.1 2.1 6.8 0.0 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF27511 - 0.082 13.4 0.0 6.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF27511 - 0.12 12.3 2.7 4.2 7.3 0.2 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF27511 - 0.12 12.4 2.6 27 4.9 0.1 3.5 4 0 0 4 4 4 0 Saposin-like type B, region 1 Ferritin PF00210.24 ORF26333 - 0.012 15.6 0.1 0.019 14.9 0.1 1.3 1 0 0 1 1 1 0 Ferritin-like domain PPP4R2 PF09184.11 ORF24837 - 0.017 14.7 29.8 0.02 14.5 29.8 1.1 1 0 0 1 1 1 0 PPP4R2 BUD22 PF09073.10 ORF24837 - 0.02 14.3 29.3 0.022 14.1 29.3 1.2 1 0 0 1 1 1 0 BUD22 CDC27 PF09507.10 ORF24837 - 0.15 11.4 30.2 0.21 11.0 30.2 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 SDA1 PF05285.12 ORF24837 - 0.55 9.6 31.4 0.69 9.3 31.4 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF24837 - 0.69 8.0 33.9 0.73 8.0 33.9 1.1 1 0 0 1 1 1 0 Nop14-like family CNDH2_C PF16858.5 ORF24837 - 1.4 8.7 14.5 1.6 8.5 14.5 1.1 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term DUF913 PF06025.12 ORF24837 - 1.5 7.8 11.8 1.6 7.6 11.8 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) TFIIA PF03153.13 ORF24837 - 3.1 7.7 34.6 3.8 7.4 34.6 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit NPR3 PF03666.13 ORF24837 - 5 5.8 13.5 4.7 5.9 13.5 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4875 PF16175.5 ORF24799 - 0.068 13.3 0.2 0.11 12.6 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4875) Peptidase_A8 PF01252.18 ORF24073 - 0.089 13.0 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Signal peptidase (SPase) II FKBP_C PF00254.28 ORF24069 - 1.9e-15 57.0 0.0 2.7e-15 56.5 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Ank_5 PF13857.6 ORF23365 - 1.3e-13 50.9 0.0 4.4e-05 23.7 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF23365 - 8e-13 48.6 0.3 5.1e-05 23.7 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF23365 - 1.5e-12 48.0 0.0 9.6e-06 26.1 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF23365 - 6.9e-10 38.3 0.0 0.36 11.5 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF23365 - 3.7e-08 33.5 0.0 0.033 14.7 0.0 4.0 4 0 0 4 4 4 3 Ankyrin repeat Peptidase_C1 PF00112.23 ORF22925 - 4.1e-24 85.9 0.3 5e-24 85.6 0.3 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF22925 - 0.0006 19.6 0.0 0.0015 18.3 0.0 1.6 1 1 0 1 1 1 1 Peptidase family C1 propeptide EF-hand_1 PF00036.32 ORF22833 - 6.9e-42 137.9 11.9 1.7e-10 39.6 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF22833 - 1.4e-35 121.6 2.9 4.2e-18 65.6 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF22833 - 2.8e-31 104.7 6.0 1.3e-09 37.2 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF22833 - 3.8e-31 106.7 11.0 8.8e-15 54.3 0.8 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF22833 - 4.6e-27 92.3 9.4 2.3e-06 26.8 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF22833 - 5.3e-16 58.7 0.1 6.4e-09 36.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF22833 - 3e-09 36.8 0.6 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF22833 - 3.9e-08 33.6 0.2 0.0043 17.4 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF22833 - 4.3e-07 30.8 0.0 0.00058 20.7 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF22833 - 2.1e-05 24.5 0.0 0.042 13.9 0.0 3.0 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 ORF22833 - 8.1e-05 22.7 4.0 0.016 15.4 0.4 2.9 1 1 2 3 3 3 2 Dockerin type I domain TerB PF05099.13 ORF22833 - 0.00011 22.1 0.4 0.084 12.8 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB EFhand_Ca_insen PF08726.10 ORF22833 - 0.00012 22.1 1.0 0.00064 19.8 0.2 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF22833 - 0.00053 20.7 0.5 1.2 10.0 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF22833 - 0.001 19.0 0.7 0.46 10.4 0.0 3.4 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF22833 - 0.0025 18.2 0.2 1.6 9.1 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF22833 - 0.0097 16.0 0.1 0.19 11.9 0.0 2.2 2 0 0 2 2 2 1 Transcription factor MotA, activation domain YqeY PF09424.10 ORF22833 - 0.012 15.7 0.3 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein SurA_N_2 PF13623.6 ORF22833 - 0.015 15.2 0.5 0.93 9.4 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain Poly_export PF02563.16 ORF22833 - 0.021 15.0 0.1 6.7 7.0 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein DUF5580 PF17743.1 ORF22833 - 0.027 13.0 0.0 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_14 PF17959.1 ORF22833 - 0.052 13.9 0.1 11 6.4 0.0 2.4 1 1 0 2 2 2 0 EF-hand domain Fe_hyd_lg_C PF02906.14 ORF22833 - 0.053 13.2 0.5 0.13 11.9 0.5 1.7 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF22833 - 0.06 12.5 0.0 4.6 6.3 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF22833 - 0.078 11.6 0.1 2.1 6.8 0.0 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF22833 - 0.082 13.4 0.0 6.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF22833 - 0.12 12.3 2.7 4.2 7.3 0.2 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF22833 - 0.12 12.4 2.6 27 4.9 0.1 3.5 4 0 0 4 4 4 0 Saposin-like type B, region 1 LysE PF01810.18 ORF22056 - 7.1e-39 133.3 10.2 7.9e-39 133.1 10.2 1.0 1 0 0 1 1 1 1 LysE type translocator DUF485 PF04341.12 ORF22056 - 2.1 8.4 7.5 0.16 12.0 0.6 2.3 2 1 0 2 2 2 0 Protein of unknown function, DUF485 JmjN PF02375.17 ORF21371 - 0.073 13.0 0.1 0.2 11.7 0.1 1.7 1 0 0 1 1 1 0 jmjN domain DUF3963 PF13124.6 ORF21371 - 0.23 11.4 1.5 1.5 8.8 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3963) DUF667 PF05018.13 ORF20405 - 4.2e-60 202.6 1.8 5e-60 202.4 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) EF-hand_1 PF00036.32 ORF1888 - 6.9e-42 137.9 11.9 1.7e-10 39.6 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF1888 - 1.4e-35 121.6 2.9 4.2e-18 65.6 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF1888 - 2.8e-31 104.7 6.0 1.3e-09 37.2 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF1888 - 3.8e-31 106.7 11.0 8.8e-15 54.3 0.8 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF1888 - 4.6e-27 92.3 9.4 2.3e-06 26.8 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF1888 - 5.3e-16 58.7 0.1 6.4e-09 36.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF1888 - 3e-09 36.8 0.6 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF1888 - 3.9e-08 33.6 0.2 0.0043 17.4 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF1888 - 4.3e-07 30.8 0.0 0.00058 20.7 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF1888 - 2.1e-05 24.5 0.0 0.042 13.9 0.0 3.0 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 ORF1888 - 8.1e-05 22.7 4.0 0.016 15.4 0.4 2.9 1 1 2 3 3 3 2 Dockerin type I domain TerB PF05099.13 ORF1888 - 0.00011 22.1 0.4 0.084 12.8 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB EFhand_Ca_insen PF08726.10 ORF1888 - 0.00012 22.1 1.0 0.00064 19.8 0.2 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF1888 - 0.00053 20.7 0.5 1.2 10.0 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF1888 - 0.001 19.0 0.7 0.46 10.4 0.0 3.4 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF1888 - 0.0025 18.2 0.2 1.6 9.1 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF1888 - 0.0097 16.0 0.1 0.19 11.9 0.0 2.2 2 0 0 2 2 2 1 Transcription factor MotA, activation domain YqeY PF09424.10 ORF1888 - 0.012 15.7 0.3 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein SurA_N_2 PF13623.6 ORF1888 - 0.015 15.2 0.5 0.93 9.4 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain Poly_export PF02563.16 ORF1888 - 0.021 15.0 0.1 6.7 7.0 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein DUF5580 PF17743.1 ORF1888 - 0.027 13.0 0.0 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_14 PF17959.1 ORF1888 - 0.052 13.9 0.1 11 6.4 0.0 2.4 1 1 0 2 2 2 0 EF-hand domain Fe_hyd_lg_C PF02906.14 ORF1888 - 0.053 13.2 0.5 0.13 11.9 0.5 1.7 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF1888 - 0.06 12.5 0.0 4.6 6.3 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF1888 - 0.078 11.6 0.1 2.1 6.8 0.0 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF1888 - 0.082 13.4 0.0 6.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF1888 - 0.12 12.3 2.7 4.2 7.3 0.2 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF1888 - 0.12 12.4 2.6 27 4.9 0.1 3.5 4 0 0 4 4 4 0 Saposin-like type B, region 1 Proteasome PF00227.26 ORF18441 - 3.2e-15 56.1 0.1 5.9e-15 55.3 0.1 1.4 1 1 0 1 1 1 1 Proteasome subunit ALF PF03752.13 ORF18441 - 0.055 13.4 1.9 0.12 12.4 0.6 2.2 1 1 1 2 2 2 0 Short repeats of unknown function PspC PF04024.12 ORF18441 - 0.094 12.5 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 PspC domain DUF2062 PF09835.9 ORF17031 - 0.018 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Aa_trans PF01490.18 ORF17031 - 0.033 12.9 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF17031 - 0.043 14.1 0.6 0.087 13.1 0.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal Headcase PF16002.5 ORF16812 - 9.6 5.6 14.2 0.19 11.2 5.5 2.3 3 0 0 3 3 3 0 Headcase protein Abhydrolase_1 PF00561.20 ORF16564 - 0.015 14.9 0.0 0.03 13.9 0.0 1.4 1 1 0 1 1 1 0 alpha/beta hydrolase fold DUF676 PF05057.14 ORF16564 - 0.016 14.7 0.0 0.02 14.4 0.0 1.2 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Ldt_C PF17969.1 ORF16498 - 0.4 11.4 2.5 0.75 10.6 0.2 2.4 1 1 1 2 2 2 0 L,D-transpeptidase C-terminal domain Myc_target_1 PF15179.6 ORF16498 - 1 9.3 7.6 0.23 11.3 3.9 1.8 1 1 0 2 2 2 0 Myc target protein 1 ALMT PF11744.8 ORF16498 - 7.9 5.2 11.9 8.7 5.1 11.9 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter EF-hand_1 PF00036.32 ORF16377 - 6.9e-42 137.9 11.9 1.7e-10 39.6 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF16377 - 1.4e-35 121.6 2.9 4.2e-18 65.6 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF16377 - 2.8e-31 104.7 6.0 1.3e-09 37.2 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF16377 - 3.8e-31 106.7 11.0 8.8e-15 54.3 0.8 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF16377 - 4.6e-27 92.3 9.4 2.3e-06 26.8 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF16377 - 5.3e-16 58.7 0.1 6.4e-09 36.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF16377 - 3e-09 36.8 0.6 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF16377 - 3.9e-08 33.6 0.2 0.0043 17.4 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF16377 - 4.3e-07 30.8 0.0 0.00058 20.7 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF16377 - 2.1e-05 24.5 0.0 0.042 13.9 0.0 3.0 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 ORF16377 - 8.1e-05 22.7 4.0 0.016 15.4 0.4 2.9 1 1 2 3 3 3 2 Dockerin type I domain TerB PF05099.13 ORF16377 - 0.00011 22.1 0.4 0.084 12.8 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB EFhand_Ca_insen PF08726.10 ORF16377 - 0.00012 22.1 1.0 0.00064 19.8 0.2 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF16377 - 0.00053 20.7 0.5 1.2 10.0 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF16377 - 0.001 19.0 0.7 0.46 10.4 0.0 3.4 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF16377 - 0.0025 18.2 0.2 1.6 9.1 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF16377 - 0.0097 16.0 0.1 0.19 11.9 0.0 2.2 2 0 0 2 2 2 1 Transcription factor MotA, activation domain YqeY PF09424.10 ORF16377 - 0.012 15.7 0.3 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein SurA_N_2 PF13623.6 ORF16377 - 0.015 15.2 0.5 0.93 9.4 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain Poly_export PF02563.16 ORF16377 - 0.021 15.0 0.1 6.7 7.0 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein DUF5580 PF17743.1 ORF16377 - 0.027 13.0 0.0 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_14 PF17959.1 ORF16377 - 0.052 13.9 0.1 11 6.4 0.0 2.4 1 1 0 2 2 2 0 EF-hand domain Fe_hyd_lg_C PF02906.14 ORF16377 - 0.053 13.2 0.5 0.13 11.9 0.5 1.7 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF16377 - 0.06 12.5 0.0 4.6 6.3 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF16377 - 0.078 11.6 0.1 2.1 6.8 0.0 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF16377 - 0.082 13.4 0.0 6.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF16377 - 0.12 12.3 2.7 4.2 7.3 0.2 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF16377 - 0.12 12.4 2.6 27 4.9 0.1 3.5 4 0 0 4 4 4 0 Saposin-like type B, region 1 EF-hand_1 PF00036.32 ORF15940 - 6.9e-42 137.9 11.9 1.7e-10 39.6 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF15940 - 1.4e-35 121.6 2.9 4.2e-18 65.6 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF15940 - 2.8e-31 104.7 6.0 1.3e-09 37.2 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF15940 - 3.8e-31 106.7 11.0 8.8e-15 54.3 0.8 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF15940 - 4.6e-27 92.3 9.4 2.3e-06 26.8 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF15940 - 5.3e-16 58.7 0.1 6.4e-09 36.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF15940 - 3e-09 36.8 0.6 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF15940 - 3.9e-08 33.6 0.2 0.0043 17.4 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF15940 - 4.3e-07 30.8 0.0 0.00058 20.7 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF15940 - 2.1e-05 24.5 0.0 0.042 13.9 0.0 3.0 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 ORF15940 - 8.1e-05 22.7 4.0 0.016 15.4 0.4 2.9 1 1 2 3 3 3 2 Dockerin type I domain TerB PF05099.13 ORF15940 - 0.00011 22.1 0.4 0.084 12.8 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB EFhand_Ca_insen PF08726.10 ORF15940 - 0.00012 22.1 1.0 0.00064 19.8 0.2 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF15940 - 0.00053 20.7 0.5 1.2 10.0 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF15940 - 0.001 19.0 0.7 0.46 10.4 0.0 3.4 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF15940 - 0.0025 18.2 0.2 1.6 9.1 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF15940 - 0.0097 16.0 0.1 0.19 11.9 0.0 2.2 2 0 0 2 2 2 1 Transcription factor MotA, activation domain YqeY PF09424.10 ORF15940 - 0.012 15.7 0.3 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein SurA_N_2 PF13623.6 ORF15940 - 0.015 15.2 0.5 0.93 9.4 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain Poly_export PF02563.16 ORF15940 - 0.021 15.0 0.1 6.7 7.0 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein DUF5580 PF17743.1 ORF15940 - 0.027 13.0 0.0 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_14 PF17959.1 ORF15940 - 0.052 13.9 0.1 11 6.4 0.0 2.4 1 1 0 2 2 2 0 EF-hand domain Fe_hyd_lg_C PF02906.14 ORF15940 - 0.053 13.2 0.5 0.13 11.9 0.5 1.7 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF15940 - 0.06 12.5 0.0 4.6 6.3 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF15940 - 0.078 11.6 0.1 2.1 6.8 0.0 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF15940 - 0.082 13.4 0.0 6.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF15940 - 0.12 12.3 2.7 4.2 7.3 0.2 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF15940 - 0.12 12.4 2.6 27 4.9 0.1 3.5 4 0 0 4 4 4 0 Saposin-like type B, region 1 TMEM43 PF07787.12 ORF14625 - 2.5 7.4 5.2 3 7.2 5.2 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 MDH PF02315.16 ORF13929 - 0.0079 16.2 0.1 0.011 15.8 0.1 1.3 1 0 0 1 1 1 1 Methanol dehydrogenase beta subunit Recep_L_domain PF01030.24 ORF13367 - 0.045 13.9 1.1 0.071 13.2 0.5 1.6 1 1 0 1 1 1 0 Receptor L domain NPL4 PF05021.15 ORF13345 - 2e-09 37.2 1.9 3e-09 36.7 1.9 1.3 1 1 0 1 1 1 1 NPL4 family ArdA PF07275.11 ORF13345 - 0.025 15.2 0.1 0.028 15.0 0.1 1.1 1 0 0 1 1 1 0 Antirestriction protein (ArdA) pXO2-34 PF17362.2 ORF13345 - 0.084 12.8 0.1 0.36 10.7 0.1 2.0 1 1 0 1 1 1 0 Family of unknown function DUF2062 PF09835.9 ORF13328 - 0.018 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Aa_trans PF01490.18 ORF13328 - 0.033 12.9 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF13328 - 0.043 14.1 0.6 0.087 13.1 0.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DOPA_dioxygen PF08883.11 ORF12191 - 0.17 12.1 0.0 3 8.1 0.0 2.0 2 0 0 2 2 2 0 Dopa 4,5-dioxygenase family Tim17 PF02466.19 ORF11875 - 0.00014 22.2 3.5 0.00023 21.5 3.5 1.3 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family SAS-6_N PF16531.5 ORF11213 - 1.3e-22 80.2 3.6 1.3e-22 80.2 3.6 1.6 2 0 0 2 2 2 1 Centriolar protein SAS N-terminal Phage_head_chap PF11113.8 ORF11213 - 0.0057 16.7 0.0 0.17 12.0 0.0 2.3 2 0 0 2 2 2 1 Head assembly gene product SCHIP-1 PF10148.9 ORF111579 - 0.19 11.3 0.5 0.25 11.0 0.5 1.2 1 0 0 1 1 1 0 Schwannomin-interacting protein 1 Uteroglobin PF01099.17 ORF110113 - 0.16 12.3 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 Uteroglobin family Prefoldin_2 PF01920.20 ORF110111 - 0.00021 21.2 13.2 0.00021 21.2 13.2 3.4 1 1 2 3 3 2 1 Prefoldin subunit HMMR_N PF15905.5 ORF110111 - 0.0073 15.8 37.6 0.0082 15.7 37.6 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Spc7 PF08317.11 ORF110111 - 0.032 13.1 35.2 0.053 12.4 34.2 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein TPR_MLP1_2 PF07926.12 ORF110111 - 0.085 12.9 31.0 0.061 13.4 29.2 1.6 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Fez1 PF06818.15 ORF110111 - 0.78 10.2 30.2 0.4 11.1 12.2 2.1 1 1 1 2 2 2 0 Fez1 DUF4164 PF13747.6 ORF110111 - 0.85 9.9 19.8 0.038 14.3 12.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) Atg14 PF10186.9 ORF110111 - 1.1 8.3 31.7 2.5 7.1 31.7 1.6 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 SPATA24 PF15175.6 ORF110111 - 1.2 9.0 30.3 1.5 8.7 30.3 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 24 RasGAP_C PF03836.15 ORF110111 - 1.3 9.1 26.4 3.6 7.7 26.4 1.6 1 1 0 1 1 1 0 RasGAP C-terminus Exonuc_VII_L PF02601.15 ORF110111 - 2.1 7.9 18.0 3.1 7.3 18.0 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Relaxase PF03432.14 ORF110111 - 2.5 7.6 19.8 3 7.4 19.8 1.1 1 0 0 1 1 1 0 Relaxase/Mobilisation nuclease domain DUF4845 PF16137.5 ORF110111 - 3.2 8.7 9.1 2.8 8.9 6.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4845) DUF4407 PF14362.6 ORF110111 - 3.5 6.9 15.9 4.5 6.5 15.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4200 PF13863.6 ORF110111 - 6.2 7.2 41.5 3.2 8.2 10.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Sulfatase_C PF14707.6 ORF110111 - 6.9 7.4 7.1 0.95 10.2 1.7 2.0 1 1 1 2 2 2 0 C-terminal region of aryl-sulfatase DUF1664 PF07889.12 ORF110111 - 7.6 6.6 17.5 2.8 8.0 12.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) V_ATPase_I PF01496.19 ORF110111 - 10 3.9 19.4 12 3.6 19.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Vta1_C PF18097.1 ORF10933 - 1e-06 28.3 0.4 1.4e-06 27.8 0.4 1.2 1 0 0 1 1 1 1 Vta1 C-terminal domain CCDC24 PF15669.5 ORF10933 - 0.012 15.5 0.7 0.017 15.0 0.7 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family DUF4041 PF13250.6 ORF10933 - 0.022 14.7 0.5 0.035 14.0 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) D123 PF07065.14 ORF10933 - 0.069 12.3 5.9 1.2 8.2 0.1 2.1 2 0 0 2 2 2 0 D123 Paramyxo_NS_C PF02725.14 ORF10933 - 0.15 12.2 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Non-structural protein C CDC45 PF02724.14 ORF10933 - 0.15 10.3 8.4 0.15 10.3 8.4 1.1 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 ORF10933 - 0.17 11.7 7.8 0.19 11.6 7.8 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 BEX PF04538.12 ORF10933 - 0.29 11.8 15.9 0.026 15.1 11.0 1.6 2 0 0 2 2 2 0 Brain expressed X-linked like family TonB_N PF16031.5 ORF10933 - 0.41 11.2 14.2 0.11 13.0 10.8 1.8 2 0 0 2 2 2 0 TonB polyproline region Herpes_DNAp_acc PF04929.12 ORF10933 - 0.44 9.5 10.5 0.55 9.1 10.5 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Neur_chan_memb PF02932.16 ORF10933 - 0.57 10.2 3.2 0.64 10.0 3.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DNA_pol_phi PF04931.13 ORF10933 - 2.8 6.0 11.7 3.4 5.6 11.7 1.1 1 0 0 1 1 1 0 DNA polymerase phi Striatin PF08232.12 ORF10933 - 5.3 7.6 10.1 3.5 8.2 8.3 1.5 1 1 0 2 2 2 0 Striatin family DUF3391 PF11871.8 ORF10933 - 5.4 7.6 9.4 0.62 10.6 5.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) SPACA9 PF15120.6 ORF108315 - 0.012 15.4 4.9 0.018 14.8 4.9 1.3 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 DUF2508 PF10704.9 ORF108315 - 0.031 14.4 7.9 0.031 14.4 7.9 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF2508) ERM PF00769.19 ORF108315 - 0.16 11.8 27.1 0.34 10.7 27.1 1.5 1 1 0 1 1 1 0 Ezrin/radixin/moesin family STN1_2 PF09170.10 ORF108315 - 0.35 11.1 11.5 0.43 10.8 11.5 1.1 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 DUF3584 PF12128.8 ORF108315 - 0.45 8.0 22.4 0.56 7.7 22.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Yuri_gagarin PF15934.5 ORF108315 - 0.74 9.6 18.7 2.2 8.0 18.9 1.6 1 1 0 1 1 1 0 Yuri gagarin KxDL PF10241.9 ORF108315 - 0.94 9.8 17.1 0.45 10.8 7.4 2.5 1 1 0 2 2 2 0 Uncharacterized conserved protein CC2-LZ PF16516.5 ORF108315 - 1.5 9.3 24.6 2.1 8.7 13.1 2.3 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF2570 PF10828.8 ORF108315 - 1.7 8.5 20.9 0.47 10.3 12.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) HIP1_clath_bdg PF16515.5 ORF108315 - 2.1 9.0 25.4 4.5 7.9 3.1 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Atg14 PF10186.9 ORF108315 - 2.2 7.3 25.9 3.9 6.5 8.3 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF108315 - 2.6 6.8 26.9 4 6.2 26.9 1.3 1 1 0 1 1 1 0 Spc7 kinetochore protein CorA PF01544.18 ORF108315 - 3.3 7.0 10.6 4.5 6.5 9.9 1.5 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein PTS_IIA PF02255.16 ORF108315 - 3.7 7.7 11.3 0.34 11.0 5.8 2.1 2 1 1 3 3 3 0 PTS system, Lactose/Cellobiose specific IIA subunit TEX13 PF15186.6 ORF108315 - 3.8 7.2 14.5 5.6 6.6 13.8 1.6 1 1 1 2 2 2 0 Testis-expressed sequence 13 protein family Mod_r PF07200.13 ORF108315 - 4.1 7.5 26.6 0.1 12.7 17.1 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein GAS PF13851.6 ORF108315 - 4.2 6.7 33.3 0.69 9.2 24.3 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Fib_alpha PF08702.10 ORF108315 - 4.4 7.5 21.2 2.7 8.2 10.3 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Golgin_A5 PF09787.9 ORF108315 - 4.9 6.5 23.9 9 5.7 23.9 1.4 1 1 0 1 1 1 0 Golgin subfamily A member 5 LPD5 PF18799.1 ORF108315 - 5 7.5 17.0 11 6.5 17.0 1.6 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 Sulfatase_C PF14707.6 ORF108315 - 8 7.2 9.2 16 6.2 4.4 2.4 1 1 1 2 2 2 0 C-terminal region of aryl-sulfatase BST2 PF16716.5 ORF108315 - 8.1 7.1 23.1 8.1 7.1 13.6 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 FapA PF03961.13 ORF108315 - 8.9 4.8 25.8 3.9 6.0 16.7 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A Pkinase PF00069.25 ORF108294 - 4.5e-12 45.9 0.0 5.6e-12 45.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain IL10 PF00726.17 ORF106682 - 0.15 11.6 1.2 2.5 7.6 0.1 2.6 2 1 1 3 3 3 0 Interleukin 10 eIF_4G1 PF12152.8 ORF106665 - 0.00035 20.7 0.3 0.00035 20.7 0.3 2.0 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 4G1 EF-hand_1 PF00036.32 ORF10566 - 6.9e-42 137.9 11.9 1.7e-10 39.6 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF10566 - 1.4e-35 121.6 2.9 4.2e-18 65.6 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF10566 - 2.8e-31 104.7 6.0 1.3e-09 37.2 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF10566 - 3.8e-31 106.7 11.0 8.8e-15 54.3 0.8 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF10566 - 4.6e-27 92.3 9.4 2.3e-06 26.8 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF10566 - 5.3e-16 58.7 0.1 6.4e-09 36.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF10566 - 3e-09 36.8 0.6 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF10566 - 3.9e-08 33.6 0.2 0.0043 17.4 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF10566 - 4.3e-07 30.8 0.0 0.00058 20.7 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF10566 - 2.1e-05 24.5 0.0 0.042 13.9 0.0 3.0 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 ORF10566 - 8.1e-05 22.7 4.0 0.016 15.4 0.4 2.9 1 1 2 3 3 3 2 Dockerin type I domain TerB PF05099.13 ORF10566 - 0.00011 22.1 0.4 0.084 12.8 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB EFhand_Ca_insen PF08726.10 ORF10566 - 0.00012 22.1 1.0 0.00064 19.8 0.2 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF10566 - 0.00053 20.7 0.5 1.2 10.0 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF10566 - 0.001 19.0 0.7 0.46 10.4 0.0 3.4 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF10566 - 0.0025 18.2 0.2 1.6 9.1 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF10566 - 0.0097 16.0 0.1 0.19 11.9 0.0 2.2 2 0 0 2 2 2 1 Transcription factor MotA, activation domain YqeY PF09424.10 ORF10566 - 0.012 15.7 0.3 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein SurA_N_2 PF13623.6 ORF10566 - 0.015 15.2 0.5 0.93 9.4 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain Poly_export PF02563.16 ORF10566 - 0.021 15.0 0.1 6.7 7.0 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein DUF5580 PF17743.1 ORF10566 - 0.027 13.0 0.0 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_14 PF17959.1 ORF10566 - 0.052 13.9 0.1 11 6.4 0.0 2.4 1 1 0 2 2 2 0 EF-hand domain Fe_hyd_lg_C PF02906.14 ORF10566 - 0.053 13.2 0.5 0.13 11.9 0.5 1.7 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF10566 - 0.06 12.5 0.0 4.6 6.3 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF10566 - 0.078 11.6 0.1 2.1 6.8 0.0 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF10566 - 0.082 13.4 0.0 6.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF10566 - 0.12 12.3 2.7 4.2 7.3 0.2 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF10566 - 0.12 12.4 2.6 27 4.9 0.1 3.5 4 0 0 4 4 4 0 Saposin-like type B, region 1 CAP_assoc_N PF14504.6 ORF10543 - 0.0017 18.1 6.2 0.012 15.3 2.2 2.2 1 1 1 2 2 2 2 CAP-associated N-terminal PBC PF03792.13 ORF10543 - 0.015 15.1 4.7 0.019 14.7 4.7 1.4 1 1 0 1 1 1 0 PBC domain DUF365 PF04033.12 ORF10543 - 0.47 10.8 3.7 0.17 12.2 1.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF365) Tachykinin PF02202.16 ORF105345 - 0.11 12.5 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Tachykinin family PPP4R2 PF09184.11 ORF10474 - 0.013 15.1 29.9 0.015 14.9 29.9 1.1 1 0 0 1 1 1 0 PPP4R2 BUD22 PF09073.10 ORF10474 - 0.018 14.4 29.3 0.019 14.3 29.3 1.2 1 0 0 1 1 1 0 BUD22 CDC27 PF09507.10 ORF10474 - 0.15 11.4 30.9 0.2 11.0 30.9 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 SDA1 PF05285.12 ORF10474 - 0.56 9.6 31.6 0.69 9.3 31.6 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF10474 - 0.65 8.1 34.0 0.68 8.1 34.0 1.1 1 0 0 1 1 1 0 Nop14-like family CNDH2_C PF16858.5 ORF10474 - 1.4 8.7 14.6 1.6 8.5 14.6 1.1 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term DUF913 PF06025.12 ORF10474 - 1.5 7.7 12.0 1.7 7.6 12.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) TFIIA PF03153.13 ORF10474 - 3.8 7.4 34.3 4.7 7.1 34.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit NPR3 PF03666.13 ORF10474 - 5.6 5.6 13.6 5.3 5.7 13.6 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 HA2 PF04408.23 ORF103095 - 0.17 12.2 5.7 0.24 11.7 5.5 1.4 1 1 0 1 1 1 0 Helicase associated domain (HA2) DDHD PF02862.17 ORF103095 - 0.2 11.8 6.5 0.22 11.6 6.5 1.1 1 0 0 1 1 1 0 DDHD domain Zip PF02535.22 ORF103095 - 0.35 10.0 2.7 0.36 10.0 2.7 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter RR_TM4-6 PF06459.12 ORF103095 - 0.46 10.3 13.6 0.5 10.2 13.6 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 EOS1 PF12326.8 ORF103095 - 0.55 10.1 2.2 0.55 10.1 2.2 1.2 1 0 0 1 1 1 0 N-glycosylation protein Presenilin PF01080.17 ORF103095 - 2.3 6.9 7.5 2.3 6.9 7.5 1.1 1 0 0 1 1 1 0 Presenilin Vfa1 PF08432.10 ORF103095 - 4 7.7 25.1 1.2 9.4 22.8 1.4 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 Glyco_transf_34 PF05637.12 ORF10304 - 5.6e-08 32.8 0.0 7.6e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 galactosyl transferase GMA12/MNN10 family MIT PF04212.18 ORF101931 - 0.00014 21.8 0.0 0.00025 21.1 0.0 1.5 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain HTH_15 PF12324.8 ORF101931 - 0.12 12.4 0.1 1.5 8.8 0.0 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase Amnionless PF14828.6 ORF101146 - 0.029 13.2 0.0 0.031 13.1 0.0 1.0 1 0 0 1 1 1 0 Amnionless OATP PF03137.20 ORF101146 - 0.03 12.6 0.0 0.033 12.5 0.0 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family LptF_LptG PF03739.14 ORF101146 - 0.033 13.1 0.0 0.041 12.7 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG FbpC_C_terminal PF17845.1 ORF101146 - 0.1 12.7 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 FbpC C-terminal regulatory nucleotide binding domain DUF2621 PF11084.8 ORF101146 - 0.16 11.9 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2621) DUF948 PF06103.11 ORF101146 - 0.31 11.3 2.2 0.51 10.6 2.2 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Ni_hydr_CYTB PF01292.20 NODE_44743_length_442_cov_2.159705_g36994_i0reverse_frame_1 - 1.3e-20 73.7 8.2 1.5e-20 73.6 8.2 1.1 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 Ferric_reduct PF01794.19 NODE_44743_length_442_cov_2.159705_g36994_i0reverse_frame_1 - 0.011 15.9 4.6 0.73 10.0 0.5 2.2 2 0 0 2 2 2 0 Ferric reductase like transmembrane component DUF4405 PF14358.6 NODE_44743_length_442_cov_2.159705_g36994_i0reverse_frame_1 - 0.013 16.1 6.1 0.013 16.1 6.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) CAP_N PF01213.19 NODE_44741_length_442_cov_2.449631_g36992_i0forward_frame_1 - 1.4 8.3 4.9 1.7 8.0 4.9 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal PRIMA1 PF16101.5 NODE_44741_length_442_cov_2.449631_g36992_i0forward_frame_1 - 1.6 8.8 10.8 2.6 8.1 10.8 1.4 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 ELFV_dehydrog_N PF02812.18 NODE_44740_length_442_cov_2.459459_g36991_i0forward_frame_1 - 5.3e-48 162.2 0.0 6.1e-48 162.0 0.0 1.0 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain rRNA_processing PF08524.11 NODE_44733_length_442_cov_58.208845_g36984_i0forward_frame_1 - 2.4e-10 40.6 17.6 2.4e-10 40.6 17.6 1.6 2 0 0 2 2 2 1 rRNA processing MIF4G_like_2 PF09090.11 NODE_44733_length_442_cov_58.208845_g36984_i0forward_frame_1 - 0.084 12.3 2.8 0.098 12.1 2.8 1.1 1 0 0 1 1 1 0 MIF4G like Presenilin PF01080.17 NODE_44733_length_442_cov_58.208845_g36984_i0forward_frame_1 - 4.5 5.9 8.8 4.5 5.9 8.8 1.1 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 NODE_44733_length_442_cov_58.208845_g36984_i0forward_frame_1 - 6.4 4.9 15.7 7.4 4.7 15.7 1.1 1 0 0 1 1 1 0 CDC45-like protein Phage_HK97_TLTM PF06120.11 NODE_44722_length_442_cov_78.855037_g36974_i0reverse_frame_1 - 0.25 10.5 7.5 0.019 14.2 2.2 1.6 1 1 1 2 2 2 0 Tail length tape measure protein GATA PF00320.27 NODE_44710_length_442_cov_122.493857_g36962_i0reverse_frame_1 - 0.11 12.2 2.6 7.2 6.3 0.8 2.5 2 0 0 2 2 2 0 GATA zinc finger Cep57_CLD_2 PF14197.6 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.013 15.6 0.5 0.022 14.9 0.5 1.3 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 DinB PF05163.12 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.028 14.4 0.4 0.037 13.9 0.4 1.2 1 0 0 1 1 1 0 DinB family DUF2968 PF11180.8 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.031 13.9 4.4 0.038 13.6 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) TMCO5 PF14992.6 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.063 12.8 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 TMCO5 family ADIP PF11559.8 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.064 13.3 0.4 0.082 13.0 0.4 1.2 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding GAS PF13851.6 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.11 11.9 0.7 0.13 11.6 0.7 1.1 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding TPR_MLP1_2 PF07926.12 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.11 12.6 2.0 0.15 12.1 2.0 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein FUSC PF04632.12 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.53 8.8 3.4 0.59 8.6 3.4 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family KfrA_N PF11740.8 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.66 10.7 8.1 0.57 10.9 6.7 1.6 1 1 0 2 2 2 0 Plasmid replication region DNA-binding N-term ASFV_J13L PF05568.11 NODE_44695_length_442_cov_377.656020_g36947_i0forward_frame_1 - 0.1 12.3 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 African swine fever virus J13L protein DUF1543 PF07566.12 NODE_44684_length_443_cov_2.590686_g36939_i0reverse_frame_1 - 0.31 10.8 3.1 1.2 9.0 3.1 1.9 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1543) PCSK9_C1 PF18459.1 NODE_44683_length_443_cov_2.674020_g36938_i0reverse_frame_1 - 5.4 7.2 8.1 0.22 11.7 0.8 2.2 1 1 1 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Hydrolase_3 PF08282.12 NODE_44683_length_443_cov_2.674020_g36938_i0forward_frame_1 - 2.7e-09 37.1 0.0 3.3e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF5383 PF17355.2 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 7.2e-05 23.2 0.3 9.2e-05 22.8 0.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5383) RIFIN PF02009.16 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.00014 21.8 3.6 0.00017 21.6 3.6 1.1 1 0 0 1 1 1 1 Rifin Orf78 PF06024.12 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.00061 20.0 0.1 0.00084 19.6 0.1 1.1 1 0 0 1 1 1 1 Orf78 (ac78) TMEM154 PF15102.6 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.0037 17.2 15.9 0.0049 16.8 15.9 1.1 1 0 0 1 1 1 1 TMEM154 protein family PRR18 PF15671.5 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.0044 16.9 9.7 0.0051 16.7 9.7 1.1 1 0 0 1 1 1 1 Proline-rich protein family 18 SP_C-Propep PF08999.10 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.017 14.9 5.2 0.022 14.5 4.2 1.7 2 0 0 2 2 2 0 Surfactant protein C, N terminal propeptide Renin_r PF07850.14 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.058 14.0 3.2 0.085 13.5 3.2 1.2 1 0 0 1 1 1 0 Renin receptor-like protein Peptidase_M56 PF05569.11 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.084 12.0 3.1 0.11 11.7 3.1 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 Amnionless PF14828.6 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.085 11.7 1.7 0.11 11.3 1.7 1.2 1 0 0 1 1 1 0 Amnionless Stevor PF17410.2 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.11 12.1 5.5 0.14 11.7 5.5 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame MGC-24 PF05283.11 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.11 12.9 12.4 0.16 12.4 12.4 1.3 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF3827 PF12877.7 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.14 10.5 1.5 0.14 10.5 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Glycophorin_A PF01102.18 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.14 12.4 6.9 0.21 11.9 6.9 1.1 1 0 0 1 1 1 0 Glycophorin A DUF5305 PF17231.2 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.15 11.4 10.7 0.2 11.1 10.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF2207 PF09972.9 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.058 12.2 2.3 0.063 12.0 2.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ceramidase PF05875.12 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.078 12.4 5.9 0.083 12.3 5.9 1.1 1 0 0 1 1 1 0 Ceramidase LMF1 PF06762.14 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.43 9.6 6.0 0.47 9.5 6.0 1.1 1 0 0 1 1 1 0 Lipase maturation factor ODV-E18 PF10717.9 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.72 9.8 19.5 8.6e+03 -3.3 19.5 2.4 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Trp_oprn_chp PF09534.10 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 1.5 8.6 18.0 1.9 8.2 18.0 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF1700 PF08006.11 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 2.7 7.5 12.7 3.5 7.1 12.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Pox_P21 PF05313.12 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 3.9 7.0 12.4 5.1 6.6 12.4 1.3 1 1 0 1 1 1 0 Poxvirus P21 membrane protein Laminin_I PF06008.14 NODE_44676_length_443_cov_4.674020_g36931_i0reverse_frame_1 - 0.06 13.1 0.0 0.071 12.8 0.0 1.1 1 0 0 1 1 1 0 Laminin Domain I Trefoil PF00088.18 NODE_44662_length_443_cov_79.514706_g36917_i0forward_frame_1 - 0.083 12.8 1.0 0.45 10.4 0.7 2.1 2 0 0 2 2 2 0 Trefoil (P-type) domain DUF4718 PF15842.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.0036 17.1 5.3 0.0038 17.1 5.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4718) Menin PF05053.13 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.011 14.1 10.2 0.012 14.0 10.2 1.0 1 0 0 1 1 1 0 Menin GAGA_bind PF06217.12 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.11 12.8 13.9 0.12 12.6 13.9 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family CPSF100_C PF13299.6 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.13 12.4 10.6 0.17 12.1 10.6 1.3 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal CDC45 PF02724.14 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.19 10.0 13.8 0.2 9.9 13.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Vfa1 PF08432.10 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.21 11.9 20.4 0.29 11.5 20.4 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 RNA_pol_Rpc4 PF05132.14 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.36 11.3 13.7 0.5 10.8 13.7 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Apt1 PF10351.9 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.49 9.2 15.6 0.5 9.2 15.6 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DDHD PF02862.17 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.58 10.3 8.5 0.71 10.0 8.5 1.2 1 0 0 1 1 1 0 DDHD domain GREB1 PF15782.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.65 7.0 10.8 0.66 7.0 10.8 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer SRP-alpha_N PF04086.13 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.68 9.8 20.9 0.75 9.7 20.9 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal SAPS PF04499.15 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.7 8.6 9.2 0.73 8.5 9.2 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Presenilin PF01080.17 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.1 8.0 14.0 1.2 7.9 14.0 1.1 1 0 0 1 1 1 0 Presenilin Connexin PF00029.19 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.2 8.9 8.1 1.2 8.8 8.1 1.2 1 0 0 1 1 1 0 Connexin XAP5 PF04921.14 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.2 8.9 18.2 1.7 8.4 18.2 1.2 1 0 0 1 1 1 0 XAP5, circadian clock regulator RR_TM4-6 PF06459.12 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.2 8.8 15.6 1.4 8.7 15.6 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Rtf2 PF04641.12 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.3 8.3 23.9 1.8 7.8 23.9 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger IHABP4_N PF16174.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 2.6 8.6 21.2 5.2 7.7 21.2 1.5 1 0 0 1 1 1 0 Intracellular hyaluronan-binding protein 4 N-terminal Hid1 PF12722.7 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 3 5.9 10.6 2.9 5.9 10.6 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Band_3_cyto PF07565.13 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 3.1 7.5 11.3 3.8 7.2 11.3 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain DUF755 PF05501.11 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 3.5 7.9 39.1 3.3 8.0 38.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF755) FancD2 PF14631.6 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 3.7 4.8 14.0 4.1 4.7 14.0 1.0 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease DUF913 PF06025.12 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 4.1 6.3 9.1 4.4 6.2 9.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF4603 PF15376.6 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 4.5 4.5 17.2 5.3 4.3 17.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) NARP1 PF12569.8 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 4.6 6.0 17.4 5.2 5.9 17.4 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 VIR_N PF15912.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 4.6 6.7 10.0 5.2 6.6 10.0 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal Neur_chan_memb PF02932.16 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 5.1 7.1 8.9 5.1 7.1 8.9 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DIPSY PF11763.8 NODE_44646_length_443_cov_311.198529_g36901_i0forward_frame_1 - 0.06 13.5 0.0 0.092 12.9 0.0 1.3 1 0 0 1 1 1 0 Cell-wall adhesin ligand-binding C-terminal FliP PF00813.20 NODE_44640_length_443_cov_3223.100490_g36895_i0forward_frame_1 - 1 9.2 3.5 1.6 8.5 0.2 2.0 1 1 1 2 2 2 0 FliP family SLATT_5 PF18160.1 NODE_44639_length_443_cov_22171.892157_g36894_i0forward_frame_1 - 2.7 7.3 10.5 1.8 7.9 5.7 2.0 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 Aldedh PF00171.22 NODE_44628_length_444_cov_2.420538_g36883_i0reverse_frame_1 - 0.034 12.6 0.5 0.038 12.5 0.5 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family GxGYxYP_N PF16216.5 NODE_44628_length_444_cov_2.420538_g36883_i0reverse_frame_1 - 0.052 13.7 0.3 0.063 13.4 0.3 1.1 1 0 0 1 1 1 0 GxGYxY sequence motif in domain of unknown function N-terminal DUF4298 PF14131.6 NODE_44628_length_444_cov_2.420538_g36883_i0reverse_frame_1 - 0.069 13.1 0.2 2.5 8.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) SRP1_TIP1 PF00660.17 NODE_44628_length_444_cov_2.420538_g36883_i0reverse_frame_1 - 0.084 12.9 0.2 0.31 11.1 0.1 1.9 1 1 1 2 2 2 0 Seripauperin and TIP1 family DAGK_cat PF00781.24 NODE_44626_length_444_cov_2.533007_g36881_i0reverse_frame_1 - 0.0018 17.9 0.0 0.0032 17.1 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Auxin_canalis PF05703.11 NODE_44623_length_444_cov_2.819071_g36878_i0reverse_frame_1 - 2.1 8.2 10.9 0.85 9.5 4.2 1.9 1 1 1 2 2 2 0 Auxin canalisation DUF4804 PF16062.5 NODE_44620_length_444_cov_3.139364_g36875_i0reverse_frame_1 - 0.15 10.9 0.0 0.18 10.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4804) HopJ PF08888.11 NODE_44616_length_444_cov_3.723716_g36871_i0forward_frame_1 - 0.063 13.5 0.5 0.12 12.6 0.5 1.5 1 0 0 1 1 1 0 HopJ type III effector protein Aldedh PF00171.22 NODE_44615_length_444_cov_3.779951_g36870_i0forward_frame_1 - 2.6e-08 32.9 0.7 1.2e-07 30.6 0.3 1.9 1 1 1 2 2 2 1 Aldehyde dehydrogenase family DUF4873 PF16170.5 NODE_44615_length_444_cov_3.779951_g36870_i0forward_frame_1 - 0.1 12.8 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4873) Nterm_IS4 PF13006.7 NODE_44614_length_444_cov_3.951100_g36869_i0forward_frame_1 - 1.5e-15 57.2 0.0 2.1e-15 56.6 0.0 1.3 1 0 0 1 1 1 1 Insertion element 4 transposase N-terminal DUF883 PF05957.13 NODE_44613_length_444_cov_4.449878_g36868_i0reverse_frame_1 - 0.045 14.4 0.3 0.097 13.3 0.0 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) VPS11_C PF12451.8 NODE_44613_length_444_cov_4.449878_g36868_i0reverse_frame_1 - 0.37 11.1 1.2 0.89 9.8 0.1 1.9 2 0 0 2 2 2 0 Vacuolar protein sorting protein 11 C terminal DUF5453 PF17534.2 NODE_44606_length_444_cov_58.782396_g36861_i0forward_frame_1 - 0.026 14.5 0.4 0.037 14.0 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5453) Peptidase_S9 PF00326.21 NODE_44600_length_444_cov_77.853301_g36855_i0forward_frame_1 - 1.9e-05 24.3 0.0 2.2e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 NODE_44600_length_444_cov_77.853301_g36855_i0forward_frame_1 - 0.0029 17.4 0.0 0.0033 17.3 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 NODE_44600_length_444_cov_77.853301_g36855_i0forward_frame_1 - 0.0063 15.8 0.0 0.017 14.4 0.0 1.7 2 0 0 2 2 2 1 Serine aminopeptidase, S33 PTPLA PF04387.14 NODE_44595_length_444_cov_89.606357_g36850_i0forward_frame_1 - 0.052 13.3 1.0 0.074 12.8 1.0 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA Skp1 PF01466.19 NODE_44593_length_444_cov_92.735941_g36848_i0forward_frame_1 - 0.047 13.8 2.4 0.047 13.8 2.4 4.1 3 1 0 3 3 3 0 Skp1 family, dimerisation domain Pro-rich PF15240.6 NODE_44593_length_444_cov_92.735941_g36848_i0forward_frame_1 - 0.058 13.7 15.3 0.07 13.4 15.3 1.1 1 0 0 1 1 1 0 Proline-rich VOMI PF03762.17 NODE_44565_length_445_cov_2.321951_g36822_i0reverse_frame_3 - 0.044 13.9 0.2 0.081 13.0 0.1 1.5 2 0 0 2 2 2 0 Vitelline membrane outer layer protein I (VOMI) LacI PF00356.21 NODE_44564_length_445_cov_2.470732_g36821_i0forward_frame_2 - 3.5e-07 29.9 0.4 6.4e-07 29.1 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family HTH_31 PF13560.6 NODE_44564_length_445_cov_2.470732_g36821_i0forward_frame_2 - 0.032 14.6 0.1 0.1 12.9 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.22 NODE_44564_length_445_cov_2.470732_g36821_i0forward_frame_2 - 0.16 12.0 0.1 0.42 10.7 0.1 1.8 1 1 0 1 1 1 0 Helix-turn-helix Aminotran_1_2 PF00155.21 NODE_44563_length_445_cov_2.504878_g36820_i0forward_frame_2 - 6.6e-14 51.8 0.0 7.1e-14 51.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II AA_permease PF00324.21 NODE_44560_length_445_cov_2.724390_g36817_i0forward_frame_3 - 5.5e-15 54.9 0.1 5.5e-15 54.9 0.1 1.5 2 0 0 2 2 2 1 Amino acid permease zf-C2H2 PF00096.26 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 0.00048 20.4 8.5 0.026 15.0 0.1 3.3 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 0.0063 17.3 1.8 0.5 11.3 0.0 2.8 2 0 0 2 2 2 1 C2H2-type zinc finger PAPS_reduct PF01507.19 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 0.23 11.5 2.6 0.2 11.7 0.9 1.7 1 1 1 2 2 2 0 Phosphoadenosine phosphosulfate reductase family zf-H2C2_2 PF13465.6 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 2.8 8.5 9.3 19 5.9 1.7 3.4 3 0 0 3 3 3 0 Zinc-finger double domain Ac76 PF05814.11 NODE_44558_length_445_cov_2.868293_g36815_i0forward_frame_3 - 1.2 9.2 10.8 0.066 13.2 2.0 2.2 2 0 0 2 2 2 0 Orf76 (Ac76) DUF4573 PF15140.6 NODE_44553_length_445_cov_5.329268_g36810_i0reverse_frame_2 - 0.0025 17.6 5.0 0.0031 17.3 5.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4573) SPATA3 PF15662.5 NODE_44553_length_445_cov_5.329268_g36810_i0reverse_frame_2 - 0.15 12.7 10.0 0.2 12.3 10.0 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family Pea-VEAacid PF08111.11 NODE_44553_length_445_cov_5.329268_g36810_i0forward_frame_3 - 0.03 14.6 8.9 16 6.1 0.1 4.9 4 0 0 4 4 4 0 Pea-VEAacid family Defb50 PF17546.2 NODE_44553_length_445_cov_5.329268_g36810_i0forward_frame_3 - 0.16 11.9 1.0 0.29 11.1 1.0 1.3 1 0 0 1 1 1 0 Beta defensin 50 MAAL_N PF05034.13 NODE_44549_length_445_cov_41.856098_g36806_i0forward_frame_3 - 0.019 14.6 0.0 0.024 14.3 0.0 1.2 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus PTS_EIIA_2 PF00359.22 NODE_44545_length_445_cov_72.373171_g36802_i0forward_frame_3 - 0.11 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DUF5041 PF16444.5 NODE_44544_length_445_cov_76.041463_g36801_i0reverse_frame_3 - 0.002 18.4 0.1 0.003 17.8 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5041) DUF5461 PF17545.2 NODE_44540_length_445_cov_80.048780_g36797_i0forward_frame_3 - 0.0046 17.2 0.5 0.0083 16.4 0.2 1.6 2 0 0 2 2 2 1 Family of unknown function (DUF5461) zf-rbx1 PF12678.7 NODE_44532_length_445_cov_147.992683_g36654_i1forward_frame_3 - 0.044 14.1 0.0 0.079 13.3 0.0 1.4 1 0 0 1 1 1 0 RING-H2 zinc finger domain EF-hand_7 PF13499.6 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 1.8e-07 31.5 0.0 4.2e-06 27.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 2.1e-07 30.3 0.0 5.5e-06 25.9 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 1.7e-06 27.8 0.1 0.00036 20.3 0.0 3.0 2 2 1 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 2e-06 26.9 0.1 6.6e-05 22.2 0.0 2.7 3 0 0 3 3 3 1 EF hand EF-hand_5 PF13202.6 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 2.8e-05 23.4 0.2 0.00017 20.9 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_11 PF08976.11 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 0.00029 21.7 0.0 0.00062 20.6 0.0 1.5 1 1 1 2 2 2 1 EF-hand domain Laps PF10169.9 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 0.005 17.4 3.9 0.005 17.4 3.9 1.5 1 1 1 2 2 2 1 Learning-associated protein Peptidase_S46 PF10459.9 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 0.043 12.5 2.5 0.049 12.3 2.5 1.1 1 0 0 1 1 1 0 Peptidase S46 CoA_transf_3 PF02515.17 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 0.072 12.2 0.1 0.093 11.8 0.1 1.3 1 1 0 1 1 1 0 CoA-transferase family III # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks150.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks150.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks150.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks150.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DASH_Duo1 PF08651.10 NODE_44525_length_445_cov_253.021951_g36783_i0forward_frame_2 - 4.9 7.0 6.8 1.4 8.7 0.4 2.5 2 1 1 4 4 4 0 DASH complex subunit Duo1 Spc7 PF08317.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.00068 18.6 11.2 0.00079 18.4 11.2 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.00073 19.8 9.3 0.00095 19.4 9.3 1.2 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 FliD_C PF07195.12 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.00086 18.8 4.6 0.0092 15.4 1.1 2.1 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus YbfN PF13982.6 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.0015 18.8 0.6 0.0044 17.3 0.1 2.0 1 1 1 2 2 2 1 YbfN-like lipoprotein BRE1 PF08647.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.0027 17.7 5.5 0.0027 17.7 5.5 2.0 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase DUF4164 PF13747.6 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.02 15.1 1.5 0.029 14.7 1.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) LCD1 PF09798.9 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.022 13.3 12.2 0.025 13.1 12.2 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein Bacillus_HBL PF05791.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.027 14.3 7.6 0.045 13.6 7.6 1.4 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) ADIP PF11559.8 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.04 14.0 11.3 0.72 9.9 11.1 2.1 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.049 12.9 5.6 0.071 12.4 5.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) FlaC_arch PF05377.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.082 13.3 1.0 0.082 13.3 1.0 2.8 1 1 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF1974 PF09317.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.19 11.3 3.3 0.22 11.1 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) ABC_tran_CTD PF16326.5 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.21 11.9 8.9 0.14 12.4 6.2 2.0 1 1 2 3 3 3 0 ABC transporter C-terminal domain LCIB_C_CA PF18599.1 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.28 10.5 1.9 0.37 10.1 1.9 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases V_ATPase_I PF01496.19 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.74 7.7 7.8 0.8 7.5 7.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1043 PF06295.12 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.85 9.6 8.8 9.5 6.3 8.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) YabA PF06156.13 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.92 10.2 7.1 1.7 9.3 6.6 1.7 1 1 1 2 2 2 0 Initiation control protein YabA APG6_N PF17675.1 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 1.6 9.2 14.2 0.15 12.6 6.9 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region BST2 PF16716.5 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 2.2 8.9 10.0 0.2 12.3 3.5 2.2 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 SecE PF00584.20 NODE_44507_length_445_cov_2416.295122_g36768_i0reverse_frame_3 - 0.00092 19.1 1.1 0.00092 19.1 1.1 1.7 2 0 0 2 2 2 1 SecE/Sec61-gamma subunits of protein translocation complex Herpes_IE2_3 PF03361.14 NODE_44500_length_446_cov_1.854015_g36763_i0reverse_frame_2 - 0.027 14.4 0.1 0.035 14.0 0.1 1.2 1 0 0 1 1 1 0 Herpes virus intermediate/early protein 2/3 DUF4131 PF13567.6 NODE_44495_length_446_cov_2.274939_g36758_i0reverse_frame_3 - 0.22 11.1 3.1 0.3 10.7 3.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Zn_clus PF00172.18 NODE_44492_length_446_cov_2.481752_g36755_i0forward_frame_3 - 2 8.6 9.5 0.97 9.6 0.3 2.4 2 0 0 2 2 2 0 Fungal Zn(2)-Cys(6) binuclear cluster domain 5_nucleotid_C PF02872.18 NODE_44489_length_446_cov_2.547445_g36752_i0forward_frame_2 - 1.9e-33 115.9 0.3 2.1e-33 115.7 0.3 1.0 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Methyltrans_SAM PF10672.9 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 9.7e-27 93.9 0.0 1.2e-26 93.6 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Cons_hypoth95 PF03602.15 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 3.5e-13 49.6 0.0 4.6e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 1.8e-08 34.3 0.0 2.3e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 2.3e-06 28.2 0.0 3.1e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 6.6e-06 25.8 0.0 8.5e-06 25.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_15 PF09445.10 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 2e-05 24.2 0.0 2.6e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 4.6e-05 23.3 0.0 5.6e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 7.5e-05 22.3 0.0 8.9e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.0002 21.9 0.0 0.00035 21.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TRM PF02005.16 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.00035 19.9 0.0 0.00045 19.5 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_12 PF08242.12 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.02 15.6 0.0 0.027 15.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.075 12.7 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltr_RsmB-F PF01189.17 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.1 12.3 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F GrpE PF01025.19 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.0012 18.5 2.2 0.0028 17.3 0.9 1.8 1 1 1 2 2 2 1 GrpE TACC_C PF05010.14 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.0024 17.7 0.7 0.0034 17.2 0.2 1.6 2 0 0 2 2 2 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF632 PF04782.12 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.0061 15.9 0.2 0.007 15.7 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF632) DUF16 PF01519.16 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.0079 16.7 0.8 0.015 15.7 0.8 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF16 DUF1706 PF08020.11 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.026 14.4 1.0 0.052 13.5 0.5 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1706) BAR_3_WASP_bdg PF10456.9 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.036 13.5 0.2 0.043 13.3 0.2 1.1 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein FlaC_arch PF05377.11 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.091 13.2 6.7 0.87 10.0 3.0 2.7 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Fib_alpha PF08702.10 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 1.1 9.5 5.8 2.2 8.5 1.6 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Pex24p PF06398.11 NODE_44481_length_446_cov_32.226277_g36744_i0forward_frame_2 - 0.93 8.4 5.4 0.95 8.4 5.4 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Tcp10_C PF07202.13 NODE_44478_length_446_cov_46.053528_g36741_i0forward_frame_2 - 1.6e-07 31.4 0.1 5e-07 29.8 0.1 1.9 1 1 0 1 1 1 1 T-complex protein 10 C-terminus MORN_2 PF07661.13 NODE_44478_length_446_cov_46.053528_g36741_i0forward_frame_2 - 0.011 15.8 0.5 1.9 9.0 0.0 3.6 2 1 2 4 4 4 0 MORN repeat variant bMG1 PF17970.1 NODE_44458_length_446_cov_88.593674_g36722_i0reverse_frame_2 - 0.12 12.4 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG1 domain MORN PF02493.20 NODE_44455_length_446_cov_92.445255_g36719_i0forward_frame_3 - 0.00014 21.5 0.2 0.00014 21.5 0.2 2.3 3 0 0 3 3 3 1 MORN repeat Osmo_CC PF08946.10 NODE_44449_length_446_cov_113.712895_g36713_i0forward_frame_3 - 0.0057 16.9 1.6 0.016 15.4 1.6 1.8 1 0 0 1 1 1 1 Osmosensory transporter coiled coil Synapsin_C PF02750.14 NODE_44449_length_446_cov_113.712895_g36713_i0forward_frame_3 - 0.021 14.3 0.0 0.031 13.8 0.0 1.2 1 0 0 1 1 1 0 Synapsin, ATP binding domain TBD PF12845.7 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_3 - 0.047 13.6 0.2 0.079 12.9 0.2 1.2 1 0 0 1 1 1 0 TBD domain Pannexin_like PF12534.8 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_2 - 2.7 7.0 3.4 3.2 6.7 3.4 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 FPL PF09758.9 NODE_44447_length_446_cov_200.902676_g36712_i0forward_frame_3 - 0.13 12.2 0.1 0.18 11.8 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein cNMP_binding PF00027.29 NODE_44440_length_446_cov_344.510949_g36705_i0reverse_frame_2 - 0.00041 20.3 0.0 0.0022 18.0 0.0 2.0 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain ROF PF07073.12 NODE_44437_length_446_cov_2502.917275_g36702_i0reverse_frame_2 - 0.16 12.1 0.4 4.9 7.4 0.1 2.3 1 1 1 2 2 2 0 Modulator of Rho-dependent transcription termination (ROF) DUF4934 PF16288.5 NODE_44437_length_446_cov_2502.917275_g36702_i0forward_frame_2 - 0.013 15.4 0.2 0.021 14.7 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4934) DNA_repr_REX1B PF14966.6 NODE_44437_length_446_cov_2502.917275_g36702_i0forward_frame_2 - 0.029 15.0 0.1 0.037 14.7 0.1 1.2 1 0 0 1 1 1 0 DNA repair REX1-B DUF2523 PF10734.9 NODE_44436_length_446_cov_2544.428224_g36701_i0reverse_frame_3 - 0.25 11.9 3.5 9.2 6.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2523) DUF2671 PF10877.8 NODE_44435_length_446_cov_2660.233577_g36700_i0reverse_frame_3 - 0.026 14.3 0.6 0.059 13.2 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) PDR_CDR PF06422.12 NODE_44435_length_446_cov_2660.233577_g36700_i0reverse_frame_3 - 8.9 6.3 8.1 52 3.8 8.1 2.0 1 1 0 1 1 1 0 CDR ABC transporter ABC_export PF16962.5 NODE_44435_length_446_cov_2660.233577_g36700_i0reverse_frame_2 - 0.016 13.7 2.9 0.019 13.4 2.9 1.1 1 0 0 1 1 1 0 Putative ABC exporter Orbi_NS3 PF01616.16 NODE_44429_length_447_cov_2.223301_g36694_i0reverse_frame_2 - 0.039 13.7 0.0 0.051 13.3 0.0 1.4 1 0 0 1 1 1 0 Orbivirus NS3 Polysacc_synt_C PF14667.6 NODE_44426_length_447_cov_2.485437_g36691_i0forward_frame_3 - 0.0084 16.2 9.6 0.012 15.7 9.6 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain Presenilin PF01080.17 NODE_44426_length_447_cov_2.485437_g36691_i0forward_frame_3 - 1.6 7.4 6.7 2 7.1 6.7 1.2 1 0 0 1 1 1 0 Presenilin SHR3_chaperone PF08229.11 NODE_44426_length_447_cov_2.485437_g36691_i0forward_frame_3 - 2.5 7.0 7.0 1.3 7.9 5.0 1.4 1 1 0 1 1 1 0 ER membrane protein SH3 SUR7 PF06687.12 NODE_44426_length_447_cov_2.485437_g36691_i0forward_frame_3 - 4.4 6.9 13.3 6.6 6.3 13.1 1.4 1 1 0 1 1 1 0 SUR7/PalI family Gtr1_RagA PF04670.12 NODE_44425_length_447_cov_2.582524_g36690_i0forward_frame_2 - 1.7e-17 63.6 0.8 2.3e-17 63.2 0.8 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Pkinase PF00069.25 NODE_44416_length_447_cov_3.359223_g36681_i0forward_frame_3 - 0.016 14.6 0.0 0.021 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain Flavodoxin_2 PF02525.17 NODE_44415_length_447_cov_3.473301_g36680_i0reverse_frame_2 - 1.2e-14 54.5 0.0 1.9e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold DUF1538 PF07556.11 NODE_44414_length_447_cov_3.631068_g36679_i0reverse_frame_2 - 0.095 12.0 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1538) MCD PF05292.11 NODE_44412_length_447_cov_3.822816_g36677_i0forward_frame_2 - 0.0031 17.1 0.4 0.0039 16.8 0.4 1.1 1 0 0 1 1 1 1 Malonyl-CoA decarboxylase C-terminal domain Zip PF02535.22 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 0.15 11.3 2.3 0.18 11.0 2.3 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Spem1 PF15670.5 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 0.3 10.6 9.4 0.37 10.3 9.4 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 RPN2_C PF18004.1 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 0.6 10.0 12.5 0.78 9.6 12.5 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain EMC3_TMCO1 PF01956.16 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 1.1 9.0 3.6 1.6 8.4 3.6 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like NPR3 PF03666.13 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 6.8 5.4 14.5 7.6 5.2 14.5 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Spem1 PF15670.5 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 0.12 11.9 8.0 0.15 11.7 8.0 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 Zip PF02535.22 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 0.14 11.3 1.5 0.17 11.1 1.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter RPN2_C PF18004.1 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 0.37 10.7 11.1 0.48 10.3 11.1 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain NPR3 PF03666.13 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 2.7 6.7 11.1 2.8 6.6 11.1 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 EMC3_TMCO1 PF01956.16 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 3.7 7.3 5.1 5.9 6.6 5.1 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Presenilin PF01080.17 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 7.1 5.3 7.2 8.3 5.0 7.2 1.1 1 0 0 1 1 1 0 Presenilin DUF2776 PF10951.8 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 1.7e-57 195.3 8.7 1.8e-57 195.2 8.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2776) NrsF PF06532.11 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.0023 17.7 5.8 0.003 17.3 5.8 1.2 1 0 0 1 1 1 1 Negative regulator of sigma F Sugar_transport PF06800.12 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.0047 16.3 3.4 0.0082 15.5 3.4 1.6 1 1 0 1 1 1 1 Sugar transport protein YtpI PF14007.6 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.007 16.5 1.9 0.0081 16.3 0.4 1.7 1 1 1 2 2 2 1 YtpI-like protein DUF4079 PF13301.6 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.45 10.7 10.7 0.2 11.8 2.4 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4079) AC_N PF16214.5 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.67 9.0 6.6 0.75 8.9 6.6 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF3671 PF12420.8 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 3.1 7.9 4.5 0.96 9.5 0.6 2.1 2 1 0 2 2 2 0 Protein of unknown function DUF4231 PF14015.6 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 4.4 7.8 5.5 0.51 10.8 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) DUF1676 PF07898.13 NODE_44407_length_447_cov_5.033981_g36674_i0forward_frame_2 - 3.3 7.7 9.2 0.42 10.6 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1676) Myc_target_1 PF15179.6 NODE_44407_length_447_cov_5.033981_g36674_i0forward_frame_2 - 4 7.3 5.9 2.2 8.2 4.5 1.4 1 1 0 1 1 1 0 Myc target protein 1 DUF3810 PF12725.7 NODE_44407_length_447_cov_5.033981_g36674_i0forward_frame_2 - 5.2 6.3 6.2 7 5.9 6.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Top6b_C PF18000.1 NODE_44406_length_447_cov_5.631068_g36673_i0reverse_frame_3 - 0.11 12.7 0.1 0.15 12.2 0.1 1.1 1 0 0 1 1 1 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain DUF1673 PF07895.11 NODE_44406_length_447_cov_5.631068_g36673_i0forward_frame_2 - 0.084 12.6 5.8 0.11 12.2 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) Hva1_TUDOR PF11160.8 NODE_44404_length_447_cov_16.995146_g36671_i0reverse_frame_2 - 0.038 14.2 1.2 0.075 13.2 1.2 1.6 1 0 0 1 1 1 0 Hypervirulence associated proteins TUDOR domain Na_K-ATPase PF00287.18 NODE_44404_length_447_cov_16.995146_g36671_i0reverse_frame_2 - 0.1 11.8 0.1 0.12 11.5 0.1 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain zf-H3C2 PF16721.5 NODE_44403_length_447_cov_52.859223_g36670_i0forward_frame_3 - 0.12 12.8 2.0 0.18 12.2 1.7 1.5 1 1 0 1 1 1 0 Zinc-finger like, probable DNA-binding MFS_1 PF07690.16 NODE_44403_length_447_cov_52.859223_g36670_i0forward_frame_2 - 0.0086 15.0 0.1 0.014 14.3 0.1 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily PGG PF13962.6 NODE_44403_length_447_cov_52.859223_g36670_i0forward_frame_2 - 0.066 13.0 0.3 0.11 12.3 0.1 1.4 2 0 0 2 2 2 0 Domain of unknown function Pkinase PF00069.25 NODE_44402_length_447_cov_54.609223_g36669_i0reverse_frame_2 - 4.2e-19 68.9 0.0 5.2e-19 68.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_44402_length_447_cov_54.609223_g36669_i0reverse_frame_2 - 8.4e-09 35.1 0.0 1.1e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_44401_length_447_cov_62.182039_g36668_i0forward_frame_3 - 9.1e-13 48.2 0.5 1.6e-12 47.4 0.2 1.5 1 1 1 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_44401_length_447_cov_62.182039_g36668_i0forward_frame_3 - 1.5e-09 37.6 0.2 1.8e-09 37.3 0.2 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_44401_length_447_cov_62.182039_g36668_i0forward_frame_2 - 5.4e-05 22.7 0.3 8e-05 22.1 0.3 1.2 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 NODE_44401_length_447_cov_62.182039_g36668_i0forward_frame_2 - 0.021 14.5 0.5 0.043 13.4 0.2 1.6 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 ETRAMP PF09716.10 NODE_44394_length_447_cov_84.752427_g36661_i0forward_frame_2 - 0.67 10.1 3.2 1.1 9.3 1.4 2.0 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) LRRCT PF01463.24 NODE_44389_length_447_cov_114.563107_g36656_i0forward_frame_3 - 0.0028 18.1 1.4 0.13 12.9 0.1 2.9 2 0 0 2 2 2 1 Leucine rich repeat C-terminal domain zf-rbx1 PF12678.7 NODE_44386_length_447_cov_147.242718_g36654_i0reverse_frame_3 - 0.044 14.1 0.0 0.079 13.3 0.0 1.4 1 0 0 1 1 1 0 RING-H2 zinc finger domain BNIP3 PF06553.12 NODE_44372_length_447_cov_527.495146_g36640_i0reverse_frame_2 - 0.032 13.9 2.2 0.043 13.5 2.2 1.1 1 0 0 1 1 1 0 BNIP3 zf-LSD1 PF06943.12 NODE_44371_length_447_cov_888.089806_g35668_i1reverse_frame_3 - 7.7e-09 35.2 10.7 3.2e-05 23.7 0.1 2.2 2 0 0 2 2 2 2 LSD1 zinc finger Lar_restr_allev PF14354.6 NODE_44371_length_447_cov_888.089806_g35668_i1reverse_frame_3 - 0.0095 16.3 2.3 0.19 12.1 1.1 2.2 2 0 0 2 2 2 1 Restriction alleviation protein Lar Elf1 PF05129.13 NODE_44371_length_447_cov_888.089806_g35668_i1reverse_frame_3 - 0.044 13.8 1.1 0.044 13.8 1.1 2.6 2 1 1 3 3 3 0 Transcription elongation factor Elf1 like FdhE PF04216.12 NODE_44371_length_447_cov_888.089806_g35668_i1reverse_frame_3 - 0.044 13.7 3.4 0.06 13.2 3.4 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zf-C3HC4_3 PF13920.6 NODE_44371_length_447_cov_888.089806_g35668_i1reverse_frame_3 - 0.19 11.6 6.2 0.5 10.3 6.2 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) YABBY PF04690.13 NODE_44371_length_447_cov_888.089806_g35668_i1reverse_frame_3 - 4.4 7.8 6.1 3.6 8.1 1.0 2.2 1 1 1 2 2 2 0 YABBY protein Tnp_zf-ribbon_2 PF13842.6 NODE_44370_length_447_cov_1280.381068_g36639_i0forward_frame_2 - 0.9 10.4 13.7 1 10.2 0.8 2.8 3 0 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon EF-hand_1 PF00036.32 NODE_44361_length_447_cov_14614.286408_g34556_i4reverse_frame_3 - 9.5e-06 24.8 0.1 1.9e-05 23.9 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 NODE_44361_length_447_cov_14614.286408_g34556_i4reverse_frame_3 - 0.00084 18.7 2.0 0.0012 18.2 0.1 2.2 2 1 1 3 3 3 1 EF hand EF-hand_6 PF13405.6 NODE_44361_length_447_cov_14614.286408_g34556_i4reverse_frame_3 - 0.00086 19.1 0.0 0.0046 16.8 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 NODE_44361_length_447_cov_14614.286408_g34556_i4reverse_frame_3 - 0.0012 19.2 0.2 0.0022 18.4 0.2 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_44361_length_447_cov_14614.286408_g34556_i4reverse_frame_2 - 0.0025 17.2 0.2 0.0039 16.6 0.2 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_44361_length_447_cov_14614.286408_g34556_i4reverse_frame_2 - 0.012 15.5 0.1 0.023 14.6 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_44361_length_447_cov_14614.286408_g34556_i4reverse_frame_2 - 0.059 13.8 0.0 0.083 13.4 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair Ntox8 PF15545.6 ORF99875 - 0.036 14.2 0.0 0.067 13.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial toxin 8 Flagellar_put PF12611.8 ORF9968 - 8.7 6.2 7.4 23 4.9 0.3 3.6 4 0 0 4 4 4 0 Putative flagellar ABC_tran PF00005.27 ORF97897 - 3.5e-11 43.7 0.0 5.5e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_ATPase PF09818.9 ORF97897 - 5.5e-05 22.1 0.1 9.1e-05 21.4 0.1 1.5 1 1 0 1 1 1 1 Predicted ATPase of the ABC class AAA_21 PF13304.6 ORF97897 - 0.0067 16.3 0.0 0.008 16.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF97897 - 0.017 14.6 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF97897 - 0.086 13.1 0.2 0.53 10.5 0.2 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit FSH1 PF03959.13 ORF97501 - 6.6e-18 65.2 0.0 7.1e-18 65.1 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase (FSH1) PMBR PF09373.10 ORF97501 - 2.4 8.5 4.5 43 4.5 0.7 2.9 2 1 0 2 2 2 0 Pseudomurein-binding repeat Peptidase_S24 PF00717.23 ORF96635 - 1.5e-08 34.5 0.2 2.4e-08 33.8 0.2 1.5 1 1 0 1 1 1 1 Peptidase S24-like DUF1287 PF06940.11 ORF96635 - 0.058 13.0 0.1 0.077 12.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1287) Amidase_6 PF12671.7 ORF96635 - 0.17 12.0 0.2 0.21 11.7 0.2 1.1 1 0 0 1 1 1 0 Putative amidase domain Ribosomal_S11 PF00411.19 ORF95910 - 1.4e-46 157.4 0.7 1.8e-46 157.1 0.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 HJURP_C PF12347.8 ORF95760 - 0.044 13.8 0.9 0.044 13.8 0.9 1.7 2 1 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat COMM_domain PF07258.14 ORF90167 - 8.4e-09 35.4 0.0 1.4e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 COMM domain RsgA_GTPase PF03193.16 ORF8987 - 0.015 15.2 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase GTP_EFTU PF00009.27 ORF8987 - 0.13 11.8 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain MCU PF04678.13 ORF88650 - 6.2e-19 68.8 4.9 8.9e-19 68.2 4.9 1.3 1 1 0 1 1 1 1 Mitochondrial calcium uniporter RabGAP-TBC PF00566.18 ORF86815 - 2.2e-21 76.5 0.3 2.7e-21 76.3 0.3 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain TRAM1 PF08390.11 ORF86815 - 0.13 11.9 0.8 0.25 11.0 0.1 1.8 2 0 0 2 2 2 0 TRAM1-like protein Phageshock_PspG PF09583.10 ORF86541 - 8.3e-25 86.8 27.0 1.2e-24 86.4 27.0 1.2 1 0 0 1 1 1 1 Phage shock protein G (Phageshock_PspG) TraL PF07178.11 ORF86541 - 2.6 8.6 13.6 5.7 7.5 2.0 2.2 1 1 1 2 2 2 0 TraL protein TMEM138 PF14935.6 ORF8509 - 6.7e-13 49.3 6.3 8.1e-13 49.1 6.3 1.1 1 0 0 1 1 1 1 Transmembrane protein 138 Ndc1_Nup PF09531.10 ORF8509 - 2.8 6.5 5.2 3.2 6.3 5.2 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup MFS_1 PF07690.16 ORF83433 - 3.2e-12 46.0 0.1 3.5e-12 45.9 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_3 PF05977.13 ORF83433 - 0.0095 14.4 0.0 0.0097 14.3 0.0 1.2 1 0 0 1 1 1 1 Transmembrane secretion effector ArAE_1 PF06081.11 ORF83433 - 0.023 14.8 6.6 0.052 13.7 6.2 1.7 1 1 0 1 1 1 0 Aromatic acid exporter family member 1 FUSC_2 PF13515.6 ORF83433 - 0.34 11.0 12.6 0.92 9.6 1.6 2.1 1 1 1 2 2 2 0 Fusaric acid resistance protein-like DUF2070 PF09843.9 ORF83433 - 1.3 7.2 6.8 1.4 7.1 6.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Sugar_tr PF00083.24 ORF83433 - 1.4 7.7 10.8 1.6 7.5 8.3 1.8 1 1 1 2 2 2 0 Sugar (and other) transporter RNB PF00773.19 ORF83182 - 1.5e-32 113.3 0.5 2e-32 112.9 0.5 1.2 1 0 0 1 1 1 1 RNB domain OB_Dis3 PF17849.1 ORF83182 - 0.0016 18.4 0.0 0.0047 16.9 0.0 1.8 2 0 0 2 2 2 1 Dis3-like cold-shock domain 2 (CSD2) CSD2 PF17876.1 ORF83182 - 0.082 13.1 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Cold shock domain Ion_trans PF00520.31 ORF8185 - 7.8e-07 28.6 1.1 1.3e-06 27.8 1.1 1.4 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF8185 - 2.3e-06 27.1 0.3 9.7e-06 25.1 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 ORF8185 - 9e-06 25.4 0.9 0.028 14.3 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF8185 - 3.6e-05 23.0 0.5 0.00012 21.4 0.1 2.0 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF8185 - 0.00035 21.0 1.2 0.00061 20.2 0.3 1.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF8185 - 0.013 15.0 0.1 0.027 14.0 0.1 1.6 1 0 0 1 1 1 0 EF hand UCH_1 PF13423.6 ORF8185 - 0.13 11.8 0.2 0.15 11.6 0.2 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase MFS_1 PF07690.16 ORF8073 - 1.2e-05 24.5 19.7 1.7e-05 23.9 19.7 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_4 PF06779.14 ORF8073 - 0.0062 15.9 13.1 0.0074 15.6 13.1 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB DUF2417 PF10329.9 ORF8073 - 0.02 14.3 0.0 0.03 13.8 0.0 1.2 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF442 PF04273.13 ORF8073 - 0.14 12.3 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Putative phosphatase (DUF442) DC_STAMP PF07782.13 ORF79863 - 0.043 13.6 0.3 0.077 12.8 0.3 1.4 1 0 0 1 1 1 0 DC-STAMP-like protein MORN PF02493.20 ORF76203 - 3.7e-05 23.4 10.2 0.0018 18.1 0.1 4.3 4 0 0 4 4 4 2 MORN repeat CS PF04969.16 ORF75647 - 9.4e-07 29.8 0.0 1.3e-06 29.3 0.0 1.2 1 0 0 1 1 1 1 CS domain Hint PF01079.20 ORF75419 - 9.6e-16 57.9 0.0 1.1e-15 57.7 0.0 1.1 1 0 0 1 1 1 1 Hint module Intein_splicing PF14890.6 ORF75419 - 0.055 13.4 0.0 0.055 13.4 0.0 1.1 1 0 0 1 1 1 0 Intein splicing domain HI0933_like PF03486.14 ORF74805 - 5.3e-39 134.1 0.0 5.7e-39 134.0 0.0 1.0 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 ORF74805 - 0.027 13.6 0.0 0.045 12.8 0.0 1.3 1 1 0 1 1 1 0 Glucose inhibited division protein A Oxysterol_BP PF01237.18 ORF74494 - 2.6e-47 161.4 0.2 3.1e-47 161.2 0.2 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein Gag_p17 PF00540.18 ORF74367 - 0.034 14.1 0.0 0.044 13.8 0.0 1.1 1 0 0 1 1 1 0 gag gene protein p17 (matrix protein) Gag_p17 PF00540.18 ORF73742 - 0.034 14.1 0.0 0.044 13.8 0.0 1.1 1 0 0 1 1 1 0 gag gene protein p17 (matrix protein) Rotamase PF00639.21 ORF72147 - 3e-06 28.1 0.0 5e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF72147 - 0.00013 22.5 0.0 0.00022 21.8 0.0 1.3 1 0 0 1 1 1 1 PPIC-type PPIASE domain FAM219A PF15260.6 ORF70503 - 0.051 14.0 4.9 0.076 13.4 2.9 1.9 1 1 1 2 2 2 0 Protein family FAM219A HTH_Tnp_IS630 PF01710.16 ORF70503 - 1.2 9.2 8.6 0.57 10.2 4.9 2.0 1 1 1 2 2 2 0 Transposase PPR PF01535.20 ORF69416 - 0.043 14.1 0.0 5 7.6 0.0 2.3 2 0 0 2 2 2 0 PPR repeat Lustrin_cystein PF14625.6 ORF69235 - 0.68 10.4 5.0 0.28 11.6 1.6 2.1 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain ApoLp-III PF07464.11 ORF67967 - 5.6e-06 26.5 0.3 0.0035 17.4 0.0 2.1 1 1 1 2 2 2 2 Apolipophorin-III precursor (apoLp-III) DUF4455 PF14643.6 ORF67967 - 0.0031 16.3 0.2 0.0044 15.7 0.1 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4455) Dot_icm_IcmQ PF09475.10 ORF67967 - 0.024 14.1 0.3 1.4 8.4 0.0 2.1 1 1 1 2 2 2 0 Dot/Icm secretion system protein (dot_icm_IcmQ) TTL PF03133.15 ORF67495 - 1.3e-16 60.6 0.1 1.8e-16 60.1 0.1 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF67495 - 1.2e-06 28.0 0.0 1.5e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF67495 - 4e-05 23.0 0.0 6.3e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF67495 - 0.0048 16.5 0.0 0.0069 15.9 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus HTH_Tnp_IS630 PF01710.16 ORF67301 - 0.0022 18.0 2.6 0.023 14.8 0.0 2.2 1 1 1 2 2 2 1 Transposase PP-binding PF00550.25 ORF67301 - 0.13 12.7 0.0 0.26 11.7 0.0 1.5 2 0 0 2 2 2 0 Phosphopantetheine attachment site SCP2 PF02036.17 ORF66230 - 1e-18 67.7 0.1 1.3e-18 67.3 0.1 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF66230 - 0.0097 16.2 0.0 0.014 15.7 0.0 1.2 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal DUF4484 PF14831.6 ORF66130 - 0.17 11.9 0.3 0.18 11.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4484) PKD_channel PF08016.12 ORF66128 - 6.2e-08 31.7 7.7 7.4e-08 31.5 7.7 1.1 1 0 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF66128 - 6.4e-05 22.3 8.3 7.2e-05 22.1 8.3 1.1 1 0 0 1 1 1 1 Ion transport protein DS PF01916.17 ORF6537 - 4.3e-35 121.4 0.2 5.6e-35 121.0 0.2 1.2 1 0 0 1 1 1 1 Deoxyhypusine synthase Phage_tail_L PF05100.12 ORF6537 - 0.094 12.0 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Phage minor tail protein L Prp31_C PF09785.9 ORF65230 - 0.13 13.2 0.6 0.16 12.9 0.6 1.2 1 0 0 1 1 1 0 Prp31 C terminal domain Oxysterol_BP PF01237.18 ORF65224 - 2.6e-47 161.4 0.2 3.1e-47 161.2 0.2 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein PTS_EIIA_2 PF00359.22 ORF65177 - 3.1e-31 108.2 0.0 3.4e-31 108.1 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DUF5621 PF18532.1 ORF6481 - 0.021 14.7 1.3 0.025 14.5 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5621) zf-RING_2 PF13639.6 ORF64625 - 6e-09 36.1 15.4 9.8e-09 35.4 15.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF64625 - 6e-06 26.0 11.8 9.8e-06 25.3 11.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF64625 - 0.00024 20.8 15.2 0.00024 20.8 15.2 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF64625 - 0.0018 18.0 15.0 0.0032 17.3 15.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF64625 - 0.0031 17.5 10.6 0.12 12.4 7.0 2.3 2 0 0 2 2 2 2 RING-type zinc-finger zf-rbx1 PF12678.7 ORF64625 - 0.005 17.1 14.5 0.011 16.0 14.5 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain Baculo_RING PF05883.11 ORF64625 - 0.022 14.7 2.9 0.033 14.2 2.9 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-ANAPC11 PF12861.7 ORF64625 - 0.05 13.7 9.4 0.16 12.1 9.4 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger CTU2 PF10288.9 ORF64625 - 0.1 12.8 3.8 5.8 7.2 3.8 2.1 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Prok-RING_4 PF14447.6 ORF64625 - 0.2 11.5 10.1 0.37 10.7 10.1 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF64625 - 0.26 11.0 11.1 0.47 10.1 11.1 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF64625 - 0.57 10.3 13.6 1.5 9.0 13.6 1.7 1 0 0 1 1 1 0 RING-variant domain zf-RING_5 PF14634.6 ORF64625 - 0.97 9.5 13.5 2.2 8.3 13.5 1.6 1 1 1 2 2 2 0 zinc-RING finger domain PPR_2 PF13041.6 ORF63597 - 1.1e-24 86.4 5.4 2.9e-07 30.6 0.0 4.5 1 1 4 5 5 5 5 PPR repeat family PPR_3 PF13812.6 ORF63597 - 7.2e-20 70.8 0.0 1.2e-08 34.9 0.0 3.0 2 1 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF63597 - 6.1e-15 54.4 0.3 0.02 15.1 0.0 4.4 5 0 0 5 5 5 4 PPR repeat PPR_1 PF12854.7 ORF63597 - 9e-06 25.3 3.5 0.21 11.3 0.0 5.3 4 3 0 4 4 4 1 PPR repeat PPR_long PF17177.4 ORF63597 - 8.8e-05 22.0 0.0 0.0074 15.7 0.0 2.3 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP Peptidase_C107 PF17222.3 ORF63597 - 0.017 14.2 0.0 8.5 5.3 0.0 3.4 1 1 3 4 4 4 0 Viral cysteine endopeptidase C107 DUF4592 PF15262.6 ORF63591 - 0.13 12.9 2.6 0.15 12.8 1.2 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4592) ATG16 PF08614.11 ORF6281 - 1.4e-06 28.7 13.9 1.9e-06 28.3 13.9 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF4201 PF13870.6 ORF6281 - 0.00031 20.5 7.0 0.00046 20.0 7.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) DUF641 PF04859.12 ORF6281 - 0.0049 17.2 9.9 0.02 15.2 2.3 2.2 1 1 1 2 2 2 1 Plant protein of unknown function (DUF641) Csm1_N PF18504.1 ORF6281 - 0.0051 17.1 8.7 0.14 12.5 1.5 2.5 1 1 1 2 2 2 2 Csm1 N-terminal domain KASH_CCD PF14662.6 ORF6281 - 0.0052 16.6 8.0 0.0062 16.4 8.0 1.1 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Fib_alpha PF08702.10 ORF6281 - 0.0074 16.5 4.6 0.04 14.1 4.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family FapA PF03961.13 ORF6281 - 0.012 14.2 2.6 0.012 14.2 2.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4005 PF13178.6 ORF6281 - 0.013 16.2 1.9 0.013 16.2 1.9 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4005) SpecificRecomb PF10136.9 ORF6281 - 0.021 13.2 2.3 0.025 12.9 2.3 1.0 1 0 0 1 1 1 0 Site-specific recombinase Spc7 PF08317.11 ORF6281 - 0.022 13.6 7.8 0.03 13.2 7.8 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DASH_Spc34 PF08657.10 ORF6281 - 0.025 14.4 5.0 0.032 14.1 5.0 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 DUF812 PF05667.11 ORF6281 - 0.029 13.3 7.3 0.036 13.0 7.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) FAM76 PF16046.5 ORF6281 - 0.036 13.4 7.5 0.048 13.0 7.5 1.3 1 1 0 1 1 1 0 FAM76 protein PKcGMP_CC PF16808.5 ORF6281 - 0.037 13.9 8.9 0.13 12.1 2.4 2.5 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF745 PF05335.13 ORF6281 - 0.093 12.4 6.1 0.15 11.8 6.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF745) Sec2p PF06428.11 ORF6281 - 0.098 12.6 9.3 0.26 11.3 1.4 2.3 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p DUF724 PF05266.14 ORF6281 - 0.1 12.4 3.9 0.14 12.0 3.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF4200 PF13863.6 ORF6281 - 0.1 13.0 12.0 0.58 10.6 11.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Macoilin PF09726.9 ORF6281 - 0.11 11.0 5.8 0.13 10.8 5.8 1.0 1 0 0 1 1 1 0 Macoilin family Seryl_tRNA_N PF02403.22 ORF6281 - 0.18 12.1 6.6 0.39 11.0 6.6 1.6 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain OmpH PF03938.14 ORF6281 - 0.18 12.1 8.1 0.03 14.7 4.5 1.4 2 0 0 2 2 1 0 Outer membrane protein (OmpH-like) TMF_DNA_bd PF12329.8 ORF6281 - 0.21 11.6 10.3 2.2 8.4 1.6 2.5 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding HAUS-augmin3 PF14932.6 ORF6281 - 0.23 11.0 8.9 0.31 10.6 8.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Draxin PF15550.6 ORF6281 - 0.29 11.0 6.5 0.34 10.8 6.5 1.1 1 0 0 1 1 1 0 Draxin Atg14 PF10186.9 ORF6281 - 0.34 9.9 10.7 0.4 9.7 10.7 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF932 PF06067.11 ORF6281 - 0.37 10.5 4.6 0.1 12.3 1.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF932) UPF0242 PF06785.11 ORF6281 - 0.46 10.6 10.6 2.9 8.0 10.6 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF6281 - 0.58 9.5 5.4 0.7 9.2 5.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 ORF6281 - 1.2 8.3 3.3 1.5 8.0 3.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein YabA PF06156.13 ORF6281 - 2 9.1 7.2 1.2 9.8 4.6 2.0 2 1 0 2 2 1 0 Initiation control protein YabA HIP1_clath_bdg PF16515.5 ORF6281 - 2.9 8.5 14.8 5.6 7.7 7.6 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Spc24 PF08286.11 ORF6281 - 4.3 7.6 7.8 18 5.6 6.0 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Cep57_MT_bd PF06657.13 ORF6281 - 6.4 7.3 11.4 0.61 10.6 6.6 1.9 2 2 0 2 2 1 0 Centrosome microtubule-binding domain of Cep57 CENP-H PF05837.12 ORF6281 - 8.6 6.8 12.3 1.2 9.6 8.7 1.4 2 0 0 2 2 1 0 Centromere protein H (CENP-H) TA_inhibitor PF17574.2 ORF6184 - 0.022 14.8 1.4 0.043 13.8 1.4 1.6 1 1 0 1 1 1 0 Inhibitor of toxin/antitoxin system (Gp4.5) WD40 PF00400.32 ORF61061 - 0.006 17.4 4.8 22 6.2 0.0 4.1 4 0 0 4 4 4 3 WD domain, G-beta repeat Borrelia_orfA PF02414.15 ORF60703 - 0.61 9.7 15.3 1.4 8.5 15.3 1.5 1 1 0 1 1 1 0 Borrelia ORF-A MORN PF02493.20 ORF60363 - 0.0029 17.4 13.3 0.0079 16.0 0.1 4.6 6 0 0 6 6 6 2 MORN repeat PTSIIA_gutA PF03829.13 ORF60363 - 0.052 13.4 0.0 0.077 12.9 0.0 1.3 1 0 0 1 1 1 0 PTS system glucitol/sorbitol-specific IIA component ACT_6 PF13740.6 ORF59219 - 2.1e-08 34.0 0.6 1.6e-06 28.0 0.1 2.3 2 1 0 2 2 2 1 ACT domain ACT PF01842.25 ORF59219 - 1.6e-07 31.0 0.0 2.4e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 ACT domain ACT_5 PF13710.6 ORF59219 - 0.0032 17.3 0.0 0.005 16.6 0.0 1.3 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 ORF59219 - 0.047 14.3 0.1 1 10.0 0.0 2.1 1 1 1 2 2 2 0 ACT domain Flg_hook PF02120.16 ORF59219 - 0.085 12.8 0.2 0.18 11.7 0.2 1.5 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK DUF3921 PF13060.6 ORF59116 - 0.027 14.5 0.1 0.13 12.3 0.1 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3921) HEAT_2 PF13646.6 ORF58835 - 8.4e-14 51.7 15.9 1.5e-11 44.6 6.8 2.0 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF58835 - 4.8e-08 32.6 0.7 9.2e-05 22.4 0.3 2.9 2 0 0 2 2 2 2 HEAT repeat Cnd1 PF12717.7 ORF58835 - 6.3e-05 23.1 0.1 0.00011 22.3 0.1 1.5 1 1 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 DUF3458_C PF17432.2 ORF58835 - 0.00023 20.7 3.2 0.00028 20.4 3.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3458_C) ARM repeats HEAT_EZ PF13513.6 ORF58835 - 0.00047 20.6 6.0 0.042 14.4 0.8 2.8 2 2 1 3 3 3 2 HEAT-like repeat Vac14_Fab1_bd PF12755.7 ORF58835 - 0.00095 19.7 0.0 0.35 11.5 0.0 3.0 1 1 1 3 3 3 1 Vacuolar 14 Fab1-binding region HEAT_PBS PF03130.16 ORF58835 - 0.0085 16.7 4.7 0.58 11.0 0.2 3.3 3 0 0 3 3 3 1 PBS lyase HEAT-like repeat FliT PF05400.13 ORF58835 - 0.0089 16.8 7.5 0.039 14.8 1.5 2.4 1 1 1 2 2 2 1 Flagellar protein FliT Adaptin_N PF01602.20 ORF58835 - 0.012 14.2 0.4 0.014 14.0 0.4 1.1 1 0 0 1 1 1 0 Adaptin N terminal region Arm PF00514.23 ORF58835 - 0.014 15.4 0.3 9.1 6.5 0.0 3.1 3 1 0 3 3 3 0 Armadillo/beta-catenin-like repeat RTP1_C1 PF10363.9 ORF58835 - 0.027 14.6 0.0 0.068 13.4 0.0 1.7 1 1 1 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 Vitellogenin_N PF01347.22 ORF58835 - 0.081 11.3 0.1 0.086 11.2 0.1 1.1 1 0 0 1 1 1 0 Lipoprotein amino terminal region T_hemolysin PF12261.8 ORF58835 - 0.12 12.2 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Thermostable hemolysin RasGEF_N_2 PF14663.6 ORF58835 - 0.17 12.3 0.3 23 5.4 0.0 2.2 1 1 1 2 2 2 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain DUF4281 PF14108.6 ORF58664 - 3e-33 114.9 1.0 3.7e-33 114.6 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4281) DUF4605 PF15378.6 ORF58664 - 0.069 13.0 3.6 0.75 9.7 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4605) PPR_2 PF13041.6 ORF56667 - 2.3e-13 50.1 0.0 6.6e-09 35.8 0.0 3.2 2 2 3 5 5 5 3 PPR repeat family PPR PF01535.20 ORF56667 - 5.5e-11 42.0 0.2 0.0061 16.7 0.0 3.5 3 0 0 3 3 3 3 PPR repeat PPR_3 PF13812.6 ORF56667 - 8.2e-10 38.6 0.0 0.00014 21.9 0.0 3.0 2 1 1 3 3 3 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF56667 - 2.1e-05 24.1 0.0 0.23 11.2 0.0 3.4 3 0 0 3 3 3 2 PPR repeat Pellino PF04710.14 ORF56667 - 0.055 12.1 0.1 0.44 9.2 0.1 1.9 1 1 0 2 2 2 0 Pellino BRCA-2_OB1 PF09103.10 ORF56667 - 0.069 13.1 0.0 0.16 11.9 0.1 1.6 2 0 0 2 2 2 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 SCP2 PF02036.17 ORF54630 - 7.6e-19 68.1 0.1 9.5e-19 67.8 0.1 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF54630 - 0.0022 18.2 0.0 0.0024 18.1 0.0 1.2 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal zf-C3HC4_4 PF15227.6 ORF5346 - 0.1 12.8 0.8 0.17 12.1 0.8 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING MORN PF02493.20 ORF49236 - 4.3e-16 57.7 36.0 3.4e-05 23.5 1.6 4.5 5 0 0 5 5 5 4 MORN repeat NPDC1 PF06809.11 ORF49192 - 0.036 13.1 0.2 0.044 12.8 0.2 1.1 1 0 0 1 1 1 0 Neural proliferation differentiation control-1 protein (NPDC1) RapH_N PF18801.1 ORF49192 - 0.082 13.0 3.2 0.23 11.6 3.2 1.7 1 0 0 1 1 1 0 response regulator aspartate phosphatase H, N terminal CAS_CSE1 PF03378.15 ORF49192 - 0.13 10.7 2.6 0.15 10.5 2.6 1.0 1 0 0 1 1 1 0 CAS/CSE protein, C-terminus DUF2344 PF10105.9 ORF49192 - 0.92 9.3 4.5 0.23 11.3 0.3 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2344) Fib_alpha PF08702.10 ORF49192 - 1.1 9.5 12.8 7.8 6.7 1.2 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family YtxH PF12732.7 ORF49192 - 4.5 7.9 8.6 21 5.7 0.3 2.3 2 0 0 2 2 2 0 YtxH-like protein DUF441 PF04284.13 ORF45679 - 2.7e-45 153.8 20.1 3.2e-45 153.6 20.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF441) CCB1 PF12046.8 ORF45679 - 0.64 9.3 2.8 0.66 9.3 1.5 1.7 1 1 0 1 1 1 0 Cofactor assembly of complex C subunit B CPP1-like PF11833.8 ORF45679 - 3.7 7.2 8.2 0.76 9.4 4.4 1.7 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Borrelia_orfA PF02414.15 ORF44264 - 0.61 9.7 15.3 1.4 8.5 15.3 1.5 1 1 0 1 1 1 0 Borrelia ORF-A DUF676 PF05057.14 ORF44077 - 0.0032 17.0 0.4 0.0052 16.3 0.4 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) AAA_7 PF12775.7 ORF44077 - 0.008 15.7 2.0 0.011 15.3 2.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF4658 PF15555.6 ORF43969 - 0.043 13.9 0.2 0.066 13.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) Promethin PF16015.5 ORF42246 - 0.32 10.9 3.7 4.1 7.4 1.2 2.3 2 0 0 2 2 2 0 Promethin Aa_trans PF01490.18 ORF41576 - 1.3e-17 63.6 5.8 1.5e-17 63.5 5.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF41576 - 8.6e-06 25.0 3.3 1.1e-05 24.7 3.3 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DNA_photolyase PF00875.18 ORF41496 - 0.011 15.7 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 DNA photolyase Baculo_E25 PF05274.11 ORF37041 - 0.032 14.1 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein E25 Methyltransf_21 PF05050.12 ORF36334 - 0.017 15.1 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase FkbM domain T3SchapCesA PF11439.8 ORF34744 - 0.012 15.7 1.0 0.022 14.9 0.5 1.7 1 1 1 2 2 2 0 Type III secretion system filament chaperone CesA SPX PF03105.19 ORF34744 - 0.013 15.5 8.0 0.016 15.1 8.0 1.0 1 0 0 1 1 1 0 SPX domain DUF763 PF05559.11 ORF34744 - 0.057 12.6 1.7 0.07 12.3 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF763) Trp_ring PF18669.1 ORF34744 - 0.33 11.1 1.7 3 8.1 0.3 2.3 2 0 0 2 2 2 0 Trimeric autotransporter adhesin Trp ring domain DUF2115 PF09888.9 ORF34744 - 0.48 10.9 4.4 0.76 10.3 4.4 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) MtrG PF04210.13 ORF34744 - 0.48 10.3 1.6 1.4 8.8 0.3 2.3 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G TMPIT PF07851.13 ORF34744 - 1.1 8.5 4.9 1.2 8.3 4.9 1.2 1 0 0 1 1 1 0 TMPIT-like protein ALMT PF11744.8 ORF34744 - 1.6 7.4 5.4 1.9 7.3 5.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter WD40 PF00400.32 ORF32819 - 2e-07 31.6 1.4 4.2e-05 24.2 0.1 3.7 4 1 0 4 4 4 1 WD domain, G-beta repeat Nup160 PF11715.8 ORF32819 - 0.014 14.0 0.3 0.026 13.2 0.3 1.5 1 1 0 1 1 1 0 Nucleoporin Nup120/160 DUF3645 PF12359.8 ORF32643 - 0.08 12.3 1.3 0.087 12.2 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3645) ABC_membrane PF00664.23 ORF31817 - 0.026 14.2 0.1 0.031 13.9 0.1 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region MLANA PF14991.6 ORF31817 - 0.037 14.3 0.2 0.053 13.8 0.2 1.4 1 1 0 1 1 1 0 Protein melan-A TMEM192 PF14802.6 ORF31817 - 0.043 12.9 0.1 0.055 12.6 0.1 1.1 1 0 0 1 1 1 0 TMEM192 family Mob1_phocein PF03637.17 ORF31229 - 3.9e-63 212.5 0.1 4.3e-63 212.3 0.1 1.0 1 0 0 1 1 1 1 Mob1/phocein family zf-RING_2 PF13639.6 ORF30820 - 4.6e-09 36.5 15.4 9.8e-09 35.4 15.4 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF30820 - 5.5e-06 26.2 11.8 9.8e-06 25.3 11.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF30820 - 0.00024 20.8 15.2 0.00024 20.8 15.2 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF30820 - 0.0017 18.2 15.0 0.0032 17.3 15.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF30820 - 0.011 16.0 14.5 0.011 16.0 14.5 1.9 2 1 0 2 2 2 0 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF30820 - 0.018 15.0 13.6 0.12 12.4 7.0 2.4 2 0 0 2 2 2 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF30820 - 0.048 13.7 9.4 0.16 12.1 9.4 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Baculo_RING PF05883.11 ORF30820 - 0.1 12.6 5.3 0.14 12.1 4.9 1.5 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain Zn_ribbon_17 PF17120.5 ORF30820 - 0.21 11.2 11.0 0.41 10.3 11.0 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF30820 - 0.83 9.7 13.5 2.2 8.3 13.5 1.7 1 1 1 2 2 2 0 zinc-RING finger domain RINGv PF12906.7 ORF30820 - 3.5 7.8 17.1 1.4 9.1 13.6 2.1 2 0 0 2 2 2 0 RING-variant domain RsfS PF02410.15 ORF28424 - 1.2e-11 44.9 0.1 1.5e-11 44.5 0.1 1.2 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation RecQ_Zn_bind PF16124.5 ORF28043 - 0.054 14.2 0.1 0.14 12.9 0.1 1.8 1 1 0 1 1 1 0 RecQ zinc-binding HECT PF00632.25 ORF26982 - 4.9e-39 134.6 0.1 5.4e-39 134.5 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Haem_bd PF14376.6 ORF26982 - 0.063 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Haem-binding domain Pyr_redox_2 PF07992.14 ORF26261 - 1.2e-12 47.7 0.1 1.8e-12 47.1 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF26261 - 0.033 14.7 0.2 0.059 13.9 0.2 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Inhibitor_I78 PF11720.8 ORF26261 - 0.12 12.5 0.0 2.3 8.3 0.0 2.3 2 0 0 2 2 2 0 Peptidase inhibitor I78 family ABC_membrane PF00664.23 ORF26135 - 0.026 14.2 0.1 0.031 13.9 0.1 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region MLANA PF14991.6 ORF26135 - 0.036 14.3 0.2 0.052 13.8 0.2 1.4 1 1 0 1 1 1 0 Protein melan-A TMEM192 PF14802.6 ORF26135 - 0.043 12.9 0.1 0.055 12.6 0.1 1.1 1 0 0 1 1 1 0 TMEM192 family SCP2 PF02036.17 ORF25364 - 1e-18 67.7 0.1 1.3e-18 67.3 0.1 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF25364 - 0.0097 16.2 0.0 0.014 15.7 0.0 1.2 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal DUF5079 PF16882.5 ORF25007 - 0.049 13.5 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5079) DUF4418 PF14387.6 ORF25007 - 0.052 13.7 5.6 0.29 11.3 1.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4418) FecR PF04773.13 ORF24780 - 0.061 13.9 0.0 0.091 13.4 0.0 1.6 1 1 0 1 1 1 0 FecR protein RIBIOP_C PF04950.12 ORF24780 - 0.53 9.7 3.5 0.57 9.6 3.5 1.0 1 0 0 1 1 1 0 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal MIT_C PF16565.5 ORF24780 - 0.87 9.6 2.9 0.66 9.9 1.2 1.6 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT DUF3367 PF11847.8 ORF24780 - 1.8 6.3 7.4 2 6.2 7.4 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase Nop16 PF09420.10 ORF24780 - 4.6 7.2 9.8 5.7 6.9 9.8 1.1 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 MORN PF02493.20 ORF24663 - 3.7e-05 23.4 10.2 0.0018 18.1 0.1 4.3 4 0 0 4 4 4 2 MORN repeat DUF3615 PF12274.8 ORF24585 - 0.064 13.8 0.1 0.1 13.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3615) DUF2597 PF10772.9 ORF24541 - 0.036 14.1 0.8 0.095 12.8 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2597) DUF4665 PF15679.5 ORF24541 - 0.19 12.4 1.6 0.24 12.0 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4665) UQ_con PF00179.26 ORF2394 - 1.1e-37 128.8 0.1 1.2e-37 128.7 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF2394 - 9.8e-05 22.1 0.0 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF2394 - 0.005 17.1 0.0 0.0072 16.6 0.0 1.3 1 0 0 1 1 1 1 RWD domain Tuberculin PF12198.8 ORF22559 - 0.079 13.1 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 Theoretical tuberculin protein 4HBT PF03061.22 ORF21866 - 2.2e-07 31.1 0.0 3.2e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily CobU PF02283.16 ORF21866 - 0.071 12.7 0.0 0.083 12.5 0.0 1.2 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase TRAPPC10 PF12584.8 ORF21219 - 0.15 11.8 0.0 0.24 11.1 0.0 1.4 1 1 0 1 1 1 0 Trafficking protein particle complex subunit 10, TRAPPC10 DUF4027 PF13219.6 ORF21219 - 0.34 10.8 1.0 0.69 9.8 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4027) HJURP_C PF12347.8 ORF21172 - 0.044 13.8 0.9 0.044 13.8 0.9 1.7 2 1 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat MitoNEET_N PF10660.9 ORF20503 - 0.009 16.0 0.0 0.024 14.7 0.0 1.7 2 0 0 2 2 2 1 Iron-containing outer mitochondrial membrane protein N-terminus FeoB_associated PF12669.7 ORF20503 - 0.039 14.4 0.0 0.064 13.7 0.0 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein TrbC PF04956.13 ORF20503 - 0.13 12.5 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 TrbC/VIRB2 family Sugar_tr PF00083.24 ORF19711 - 3.8e-07 29.3 7.3 1.5e-06 27.3 7.3 1.8 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF19711 - 2.2e-06 26.8 1.3 2.5e-06 26.7 1.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Pesticin PF16754.5 ORF17794 - 0.05 13.6 0.1 0.072 13.0 0.1 1.2 1 0 0 1 1 1 0 Bacterial toxin homologue of phage lysozyme, C-term S_4TM PF18159.1 ORF17581 - 3.7 6.8 4.7 5.2 6.3 4.7 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain BET PF17035.5 ORF16232 - 0.07 13.3 1.3 0.19 12.0 0.3 2.0 2 0 0 2 2 2 0 Bromodomain extra-terminal - transcription regulation Eclosion PF04736.12 ORF15681 - 0.068 12.9 0.3 0.72 9.6 0.2 2.1 2 0 0 2 2 2 0 Eclosion hormone His_Me_b4a2 PF18275.1 ORF14640 - 0.22 11.6 1.7 0.23 11.5 0.3 1.8 2 0 0 2 2 2 0 His-Me finger endonuclease beta4-alpha2 domain Ribosomal_L34e PF01199.18 ORF14347 - 4.1e-31 107.1 0.2 4.1e-31 107.1 0.2 1.8 2 0 0 2 2 2 1 Ribosomal protein L34e PAG PF15347.6 ORF14347 - 0.003 16.6 0.1 0.0033 16.5 0.1 1.0 1 0 0 1 1 1 1 Phosphoprotein associated with glycosphingolipid-enriched BatD PF13584.6 ORF14347 - 0.0074 15.2 0.4 0.012 14.4 0.4 1.3 1 1 0 1 1 1 1 Oxygen tolerance Vfa1 PF08432.10 ORF14347 - 0.037 14.4 6.7 0.053 13.8 6.7 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 O-antigen_lig PF13425.6 ORF13718 - 0.0023 16.8 2.6 0.0027 16.6 2.6 1.2 1 0 0 1 1 1 1 O-antigen ligase like membrane protein DUF3413 PF11893.8 ORF13718 - 0.022 13.9 0.2 0.022 13.9 0.2 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3413) 3-dmu-9_3-mt PF06983.13 ORF13088 - 0.1 13.1 1.0 2.9 8.5 0.1 2.6 2 1 1 3 3 3 0 3-demethylubiquinone-9 3-methyltransferase SHE3 PF17078.5 ORF112289 - 0.0069 16.1 5.0 0.012 15.3 5.0 1.5 1 1 0 1 1 1 1 SWI5-dependent HO expression protein 3 DUF948 PF06103.11 ORF112289 - 0.038 14.2 1.6 0.16 12.3 0.6 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Tweety PF04906.13 ORF112289 - 0.074 11.7 1.1 0.1 11.2 0.9 1.4 1 1 0 1 1 1 0 Tweety ISG65-75 PF11727.8 ORF112289 - 0.088 12.0 2.5 0.099 11.9 2.5 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein HIP1_clath_bdg PF16515.5 ORF112289 - 0.13 12.9 5.3 0.064 13.9 2.7 1.9 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 FlaC_arch PF05377.11 ORF112289 - 0.21 12.0 3.8 1.8 9.1 0.1 2.9 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF1525 PF07511.11 ORF112289 - 0.25 11.5 2.3 1.8 8.8 0.2 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1525) DUF676 PF05057.14 ORF112289 - 0.27 10.7 2.2 0.31 10.5 1.7 1.4 1 1 0 1 1 1 0 Putative serine esterase (DUF676) Remorin_C PF03763.13 ORF112289 - 0.96 9.4 6.3 0.43 10.5 4.1 1.6 2 0 0 2 2 2 0 Remorin, C-terminal region Fib_alpha PF08702.10 ORF112289 - 1.1 9.5 8.5 1.2 9.3 7.4 1.6 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family HSCB_C PF07743.13 ORF112289 - 1.1 9.8 8.1 5.2 7.6 3.9 2.9 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain RNase_J_C PF17770.1 ORF112289 - 2.7 9.1 5.4 34 5.6 1.7 2.4 1 1 1 2 2 2 0 Ribonuclease J C-terminal domain FecR PF04773.13 ORF112044 - 0.061 13.9 0.0 0.091 13.4 0.0 1.6 1 1 0 1 1 1 0 FecR protein RIBIOP_C PF04950.12 ORF112044 - 0.53 9.7 3.5 0.57 9.6 3.5 1.0 1 0 0 1 1 1 0 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal MIT_C PF16565.5 ORF112044 - 0.87 9.6 2.9 0.66 9.9 1.2 1.6 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT DUF3367 PF11847.8 ORF112044 - 1.8 6.3 7.4 2 6.2 7.4 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase Nop16 PF09420.10 ORF112044 - 4.6 7.2 9.8 5.7 6.9 9.8 1.1 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 ATG_C PF09333.11 ORF111468 - 7.6e-06 26.2 0.0 1.6e-05 25.2 0.0 1.5 1 1 0 1 1 1 1 Autophagy-related protein C terminal domain VPS13_C PF16909.5 ORF111468 - 0.00047 20.0 1.4 0.0012 18.7 1.1 1.8 1 1 1 2 2 2 2 Vacuolar-sorting-associated 13 protein C-terminal Pyr_redox_dim PF02852.22 ORF109781 - 0.15 12.3 0.5 4.2 7.7 0.4 2.3 2 1 1 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Antimicrobial18 PF08130.11 ORF108976 - 1.2 9.3 4.2 11 6.2 0.2 2.7 3 0 0 3 3 3 0 Type A lantibiotic family mTERF PF02536.14 ORF108263 - 0.037 12.9 0.1 0.041 12.8 0.1 1.1 1 0 0 1 1 1 0 mTERF Tnp_22_dsRBD PF17490.2 ORF105358 - 0.12 12.4 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 L1 transposable element dsRBD-like domain HTH_Tnp_IS630 PF01710.16 ORF104586 - 0.0022 18.0 2.6 0.023 14.8 0.0 2.2 1 1 1 2 2 2 1 Transposase PP-binding PF00550.25 ORF104586 - 0.13 12.7 0.0 0.26 11.7 0.0 1.5 2 0 0 2 2 2 0 Phosphopantetheine attachment site Pkinase PF00069.25 ORF104491 - 1.1e-37 129.9 1.2 1.2e-37 129.7 1.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF104491 - 8.1e-22 77.7 0.2 8.9e-22 77.6 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF104491 - 2.5e-05 23.7 0.6 6.4e-05 22.4 0.6 1.6 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF104491 - 0.00047 19.8 1.0 0.0022 17.6 0.9 1.9 1 1 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pox_ser-thr_kin PF05445.11 ORF104491 - 0.011 14.8 0.2 0.016 14.2 0.2 1.3 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase RIO1 PF01163.22 ORF104491 - 0.039 13.5 2.1 0.074 12.6 2.1 1.4 1 1 0 1 1 1 0 RIO1 family Pkinase_fungal PF17667.1 ORF104491 - 0.041 12.6 1.3 0.053 12.3 0.5 1.6 1 1 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF104491 - 0.1 12.5 0.7 0.37 10.7 0.3 1.8 1 1 0 2 2 2 0 Phosphotransferase enzyme family GST_C PF00043.25 ORF101916 - 1.8e-07 31.2 0.0 2.5e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF101916 - 0.0017 18.5 0.1 0.0022 18.1 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF101916 - 0.0076 16.3 0.0 0.015 15.3 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain HTH_Tnp_IS630 PF01710.16 ORF101820 - 0.0022 18.0 2.6 0.023 14.8 0.0 2.2 1 1 1 2 2 2 1 Transposase PP-binding PF00550.25 ORF101820 - 0.13 12.7 0.0 0.26 11.7 0.0 1.5 2 0 0 2 2 2 0 Phosphopantetheine attachment site Joubert PF15392.6 ORF100978 - 0.0031 17.3 0.1 0.0036 17.1 0.1 1.0 1 0 0 1 1 1 1 Joubert syndrome-associated Microcephalin PF12258.8 ORF10048 - 0.046 13.0 0.0 0.065 12.5 0.0 1.1 1 0 0 1 1 1 0 Microcephalin protein DUF1707 PF08044.11 ORF10048 - 0.088 12.9 0.1 0.17 12.0 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1707) ObR_Ig PF18589.1 NODE_44934_length_439_cov_1.393564_g37180_i0forward_frame_1 - 0.034 14.5 4.0 0.094 13.1 3.3 2.1 1 1 0 1 1 1 0 Obesity receptor immunoglobulin like domain Aldo_ket_red PF00248.21 NODE_44931_length_439_cov_1.975248_g37177_i0reverse_frame_1 - 1.2e-17 64.1 0.0 1.5e-17 63.7 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family DUF2569 PF10754.9 NODE_44930_length_439_cov_2.096535_g37176_i0forward_frame_1 - 0.11 13.0 8.3 0.13 12.7 8.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) C2 PF00168.30 NODE_44924_length_439_cov_3.329208_g37170_i0forward_frame_1 - 2.1e-07 31.2 0.2 3.6e-07 30.4 0.2 1.3 1 0 0 1 1 1 1 C2 domain FerI PF08151.12 NODE_44924_length_439_cov_3.329208_g37170_i0forward_frame_1 - 0.0048 17.0 0.1 0.031 14.4 0.0 2.0 2 0 0 2 2 2 1 FerI (NUC094) domain DUF4894 PF16235.5 NODE_44924_length_439_cov_3.329208_g37170_i0forward_frame_1 - 0.04 14.3 0.1 0.048 14.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4894) TruD PF01142.18 NODE_44924_length_439_cov_3.329208_g37170_i0forward_frame_1 - 0.046 12.5 0.0 0.056 12.2 0.0 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) LRR_4 PF12799.7 NODE_44923_length_439_cov_3.336634_g37169_i0forward_frame_1 - 4.2e-13 49.2 0.1 1.3e-05 25.4 0.1 2.4 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 NODE_44923_length_439_cov_3.336634_g37169_i0forward_frame_1 - 2e-07 30.7 0.0 0.002 17.6 0.0 2.1 1 1 1 2 2 2 2 Leucine-rich repeat LRR_8 PF13855.6 NODE_44923_length_439_cov_3.336634_g37169_i0forward_frame_1 - 4.5e-06 26.3 0.5 0.0011 18.7 0.3 2.9 1 1 1 2 2 2 2 Leucine rich repeat Herpes_gp2 PF05955.11 NODE_44922_length_439_cov_3.777228_g37168_i0reverse_frame_1 - 0.023 14.3 0.1 0.034 13.7 0.1 1.2 1 0 0 1 1 1 0 Equine herpesvirus glycoprotein gp2 EzrA PF06160.12 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.0095 14.2 22.0 0.014 13.6 22.0 1.3 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA ADIP PF11559.8 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.02 15.0 25.3 0.038 14.1 12.5 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding V_ATPase_I PF01496.19 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.027 12.4 13.0 0.03 12.3 13.0 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Spc7 PF08317.11 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.084 11.7 21.6 0.11 11.4 21.6 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4201 PF13870.6 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.25 11.0 27.3 0.017 14.8 15.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) YjcZ PF13990.6 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.32 10.3 2.8 0.92 8.8 2.4 1.8 1 1 1 2 2 2 0 YjcZ-like protein DUF812 PF05667.11 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.38 9.6 22.7 4.4 6.1 23.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF812) DUF406 PF04175.12 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 1.3 9.6 7.0 0.28 11.7 2.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF406) HIP1_clath_bdg PF16515.5 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 1.6 9.4 21.5 2 9.1 7.2 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Sec2p PF06428.11 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 1.7 8.7 21.4 0.54 10.3 4.4 2.6 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p DUF3552 PF12072.8 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 1.9 7.8 25.9 6.1 6.2 24.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) SpecificRecomb PF10136.9 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 2 6.6 4.1 2.4 6.4 4.1 1.0 1 0 0 1 1 1 0 Site-specific recombinase CREPT PF16566.5 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 2.6 8.2 17.7 3.1 7.9 8.3 2.1 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour BST2 PF16716.5 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 2.7 8.6 21.0 0.18 12.4 3.9 2.9 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 Exonuc_VII_L PF02601.15 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 3.4 7.1 15.7 6.2 6.3 15.7 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit FlaC_arch PF05377.11 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 5 7.6 15.2 10 6.6 0.8 3.6 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) OmpH PF03938.14 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 5.6 7.3 22.8 33 4.8 22.8 1.9 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) BLOC1_2 PF10046.9 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 6 7.3 19.7 3.9 7.8 10.0 2.5 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 7.2 6.7 13.1 9.4 6.3 2.0 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 8 7.0 22.2 8.2 7.0 9.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region TMPIT PF07851.13 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 8.8 5.5 21.6 2.6 7.2 10.9 2.0 1 1 1 2 2 2 0 TMPIT-like protein Furin-like_2 PF15913.5 NODE_44901_length_439_cov_103.636139_g37147_i0reverse_frame_1 - 4.7e-08 33.2 15.8 1.5e-07 31.5 13.4 2.2 1 1 1 2 2 2 1 Furin-like repeat, cysteine-rich GF_recep_IV PF14843.6 NODE_44901_length_439_cov_103.636139_g37147_i0reverse_frame_1 - 0.00057 19.7 16.1 0.00098 18.9 16.1 1.4 1 0 0 1 1 1 1 Growth factor receptor domain IV DXPR_C PF13288.6 NODE_44900_length_439_cov_108.178218_g37146_i0reverse_frame_1 - 0.16 12.2 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 DXP reductoisomerase C-terminal domain CRAL_TRIO PF00650.20 NODE_44877_length_440_cov_1.649383_g37124_i0reverse_frame_1 - 0.0012 18.6 0.0 0.0023 17.7 0.0 1.5 1 0 0 1 1 1 1 CRAL/TRIO domain DUF4116 PF13475.6 NODE_44877_length_440_cov_1.649383_g37124_i0reverse_frame_1 - 0.081 12.7 0.2 0.24 11.2 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4116) PINIT PF14324.6 NODE_44872_length_440_cov_2.239506_g37119_i0forward_frame_1 - 0.014 15.8 2.0 0.014 15.8 2.0 2.0 1 1 1 2 2 2 0 PINIT domain PTPRCAP PF15713.5 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.01 16.1 1.4 0.014 15.7 1.4 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated RPA43_OB PF17875.1 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.059 14.0 1.0 0.084 13.5 1.0 1.1 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I RtcR PF06956.11 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.079 12.4 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase DUF913 PF06025.12 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.13 11.2 1.9 0.15 11.0 1.9 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) FancD2 PF14631.6 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.17 9.2 1.6 0.19 9.1 1.6 1.0 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease EIIBC-GUT_N PF03612.14 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.55 9.9 3.3 0.74 9.5 3.3 1.1 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus ADH_N PF08240.12 NODE_44868_length_440_cov_2.528395_g37115_i0forward_frame_1 - 0.0018 18.1 0.0 0.0065 16.3 0.0 1.7 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain Zn_ribbon_recom PF13408.6 NODE_44866_length_440_cov_2.748148_g37113_i0forward_frame_1 - 3.3 8.3 6.1 13 6.4 1.0 2.3 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-Sec23_Sec24 PF04810.15 NODE_44864_length_440_cov_2.970370_g37111_i0reverse_frame_1 - 4.5e-15 55.4 7.4 8.3e-15 54.6 7.4 1.5 1 0 0 1 1 1 1 Sec23/Sec24 zinc finger Sec23_trunk PF04811.15 NODE_44864_length_440_cov_2.970370_g37111_i0reverse_frame_1 - 1.6e-12 47.6 0.0 1.9e-12 47.3 0.0 1.1 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Vps36-NZF-N PF16988.5 NODE_44864_length_440_cov_2.970370_g37111_i0reverse_frame_1 - 0.033 13.6 0.1 0.069 12.6 0.1 1.5 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zinc_ribbon_10 PF10058.9 NODE_44864_length_440_cov_2.970370_g37111_i0reverse_frame_1 - 0.51 10.1 2.8 1.2 8.9 2.8 1.6 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks151.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks151.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks151.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks151.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Rpp20 PF12328.8 NODE_44862_length_440_cov_4.362963_g37109_i0forward_frame_1 - 0.00049 20.1 0.0 0.00059 19.8 0.0 1.2 1 0 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P Alba PF01918.21 NODE_44862_length_440_cov_4.362963_g37109_i0forward_frame_1 - 0.0017 18.1 0.0 0.0028 17.4 0.0 1.5 1 0 0 1 1 1 1 Alba DUF3278 PF11683.8 NODE_44862_length_440_cov_4.362963_g37109_i0forward_frame_1 - 0.1 12.7 1.2 0.15 12.1 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3278) YojJ PF10372.9 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 0.00092 19.3 10.4 0.0019 18.2 3.9 2.3 2 0 0 2 2 2 1 Bacterial membrane-spanning protein N-terminus HIP1_clath_bdg PF16515.5 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 0.0099 16.5 8.6 0.027 15.1 5.0 2.1 2 0 0 2 2 2 1 Clathrin-binding domain of Huntingtin-interacting protein 1 Golgin_A5 PF09787.9 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 0.023 14.2 10.8 0.034 13.6 10.8 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 Spc7 PF08317.11 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 0.029 13.3 18.6 0.094 11.6 18.6 1.7 1 1 0 1 1 1 0 Spc7 kinetochore protein FlgN PF05130.12 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 0.03 14.9 8.4 0.051 14.1 8.3 1.4 1 1 0 1 1 1 0 FlgN protein DUF2408 PF10303.9 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 0.071 13.7 7.3 0.1 13.2 7.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) TerD PF02342.18 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 0.13 11.7 2.8 0.18 11.3 2.8 1.1 1 0 0 1 1 1 0 TerD domain Allexi_40kDa PF05549.11 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 0.65 9.5 5.0 0.67 9.4 4.1 1.5 1 1 0 1 1 1 0 Allexivirus 40kDa protein DUF1640 PF07798.11 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 1.1 9.2 10.2 1.3 9.0 9.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) OmpH PF03938.14 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 1.6 9.0 14.6 7.2 6.9 14.6 1.9 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF5320 PF17253.2 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 3.5 8.8 6.3 4.9 8.3 3.7 2.2 2 1 0 2 2 2 0 Family of unknown function (DUF5320) Phlebovirus_NSM PF07246.11 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_1 - 6.3 6.1 12.7 14 5.0 12.7 1.6 1 1 0 1 1 1 0 Phlebovirus nonstructural protein NS-M Bim_N PF06773.11 NODE_44851_length_440_cov_67.948148_g37098_i0forward_frame_1 - 0.024 14.3 0.2 0.077 12.7 0.2 1.8 1 0 0 1 1 1 0 Bim protein N-terminus WD40 PF00400.32 NODE_44838_length_440_cov_115.879012_g37085_i0forward_frame_1 - 6.8e-06 26.7 0.8 5.9e-05 23.8 0.0 2.6 3 0 0 3 3 3 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_44838_length_440_cov_115.879012_g37085_i0forward_frame_1 - 4.5e-05 23.7 0.0 8.9e-05 22.7 0.0 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain DUF1566 PF07603.11 NODE_44838_length_440_cov_115.879012_g37085_i0forward_frame_1 - 0.089 13.2 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1566) Ribosomal_L31e PF01198.19 NODE_44820_length_440_cov_683.572840_g37067_i0reverse_frame_1 - 3.9e-13 49.4 0.5 6.4e-13 48.8 0.5 1.3 1 0 0 1 1 1 1 Ribosomal protein L31e Importin_rep_6 PF18829.1 NODE_44820_length_440_cov_683.572840_g37067_i0reverse_frame_1 - 0.012 15.7 0.1 0.017 15.3 0.1 1.2 1 0 0 1 1 1 0 Importin repeat 6 Trans_reg_C PF00486.28 NODE_44812_length_441_cov_1.933498_g37060_i0forward_frame_1 - 1.3e-06 28.3 0.0 2.3e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal PAPS_reduct PF01507.19 NODE_44807_length_441_cov_2.780788_g37055_i0reverse_frame_1 - 1e-22 81.0 0.0 1.3e-22 80.6 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family YceG PF02618.16 NODE_44807_length_441_cov_2.780788_g37055_i0reverse_frame_1 - 0.055 13.0 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 YceG-like family AAA_21 PF13304.6 NODE_44802_length_441_cov_3.344828_g37050_i0forward_frame_1 - 0.00032 20.6 0.0 0.0022 17.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 NODE_44802_length_441_cov_3.344828_g37050_i0forward_frame_1 - 0.1 12.8 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ETRAMP PF09716.10 NODE_44795_length_441_cov_55.241379_g37043_i0reverse_frame_1 - 0.028 14.5 0.9 0.04 14.0 0.9 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Presenilin PF01080.17 NODE_44795_length_441_cov_55.241379_g37043_i0reverse_frame_1 - 0.049 12.4 1.6 0.061 12.1 1.6 1.1 1 0 0 1 1 1 0 Presenilin Polo_box_2 PF18531.1 NODE_44788_length_441_cov_75.285714_g37036_i0forward_frame_1 - 0.067 13.3 0.1 0.15 12.2 0.1 1.7 1 1 0 1 1 1 0 Polo box domain CLU PF13236.6 NODE_44781_length_441_cov_91.211823_g37029_i0reverse_frame_1 - 0.013 15.4 1.7 0.016 15.1 1.4 1.3 1 1 0 1 1 1 0 Clustered mitochondria DUF2927 PF11150.8 NODE_44781_length_441_cov_91.211823_g37029_i0reverse_frame_1 - 0.057 13.5 4.2 0.069 13.2 4.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2927) GvpL_GvpF PF06386.11 NODE_44781_length_441_cov_91.211823_g37029_i0reverse_frame_1 - 0.084 12.8 5.0 0.095 12.6 5.0 1.1 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF DUF1690 PF07956.11 NODE_44757_length_441_cov_242.307882_g37006_i0forward_frame_1 - 0.0026 18.2 13.1 0.0026 18.2 13.1 1.5 1 1 1 2 2 2 1 Protein of Unknown function (DUF1690) PRP1_N PF06424.12 NODE_44757_length_441_cov_242.307882_g37006_i0forward_frame_1 - 0.92 9.9 16.6 1.3 9.4 16.6 1.3 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal Auxin_canalis PF05703.11 NODE_44757_length_441_cov_242.307882_g37006_i0forward_frame_1 - 6.9 6.5 9.6 9.3 6.1 9.6 1.2 1 0 0 1 1 1 0 Auxin canalisation Oest_recep PF02159.15 NODE_44754_length_441_cov_677.529557_g37004_i0reverse_frame_1 - 3.4 8.2 7.5 18 5.8 1.6 2.3 1 1 1 2 2 2 0 Oestrogen receptor Imm-NTF2-2 PF15631.6 NODE_44745_length_442_cov_1.800983_g36996_i0reverse_frame_3 - 0.11 12.8 0.2 0.19 12.0 0.2 1.4 1 0 0 1 1 1 0 NTF2 fold immunity protein Pertactin PF03212.14 NODE_44744_length_442_cov_1.872236_g36995_i0reverse_frame_2 - 3.4e-12 46.3 4.3 4e-12 46.1 4.3 1.1 1 0 0 1 1 1 1 Pertactin zf-3CxxC PF13695.6 NODE_44743_length_442_cov_2.159705_g36994_i0reverse_frame_3 - 0.093 13.2 1.3 0.15 12.5 1.3 1.5 1 0 0 1 1 1 0 Zinc-binding domain ELFV_dehydrog PF00208.21 NODE_44742_length_442_cov_2.285012_g36993_i0reverse_frame_3 - 6.7e-52 176.6 0.5 7.4e-52 176.5 0.5 1.0 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DUF2207 PF09972.9 NODE_44741_length_442_cov_2.449631_g36992_i0reverse_frame_3 - 0.003 16.4 0.1 0.0035 16.2 0.1 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Cys_Knot_tox PF17486.2 NODE_44737_length_442_cov_4.122850_g36988_i0forward_frame_2 - 1.4 9.2 6.1 4 7.7 1.1 2.2 2 0 0 2 2 2 0 Cystine knot toxins DUF3792 PF12670.7 NODE_44722_length_442_cov_78.855037_g36974_i0forward_frame_3 - 0.97 9.6 14.0 1.5 9.0 12.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3792) APCDDC PF14921.6 NODE_44719_length_442_cov_89.238329_g36971_i0forward_frame_2 - 0.044 13.2 0.2 0.054 12.9 0.2 1.1 1 0 0 1 1 1 0 Adenomatosis polyposis coli down-regulated 1 zf-like PF04071.12 NODE_44715_length_442_cov_112.601966_g36967_i0forward_frame_3 - 2.3 8.2 6.1 1.4 8.8 0.6 2.2 1 1 1 2 2 2 0 Cysteine-rich small domain ABC2_membrane_2 PF12679.7 NODE_44714_length_442_cov_116.923833_g36966_i0reverse_frame_2 - 0.041 13.1 1.9 0.059 12.6 1.9 1.2 1 1 0 1 1 1 0 ABC-2 family transporter protein MTBP_C PF14920.6 NODE_44710_length_442_cov_122.493857_g36962_i0forward_frame_3 - 7 6.3 21.7 8.6 6.0 21.7 1.2 1 0 0 1 1 1 0 MDM2-binding Aminotran_1_2 PF00155.21 NODE_44708_length_442_cov_126.348894_g36960_i0forward_frame_3 - 0.064 12.4 0.0 0.071 12.3 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class I and II SCF PF02404.15 NODE_44703_length_442_cov_171.565111_g36955_i0reverse_frame_2 - 1.4 8.2 6.4 2 7.7 6.4 1.1 1 0 0 1 1 1 0 Stem cell factor MORN PF02493.20 NODE_44703_length_442_cov_171.565111_g36955_i0forward_frame_3 - 2.2e-09 36.7 26.4 3.1e-05 23.6 0.9 4.8 5 1 0 5 5 5 4 MORN repeat Kelch_4 PF13418.6 NODE_44702_length_442_cov_173.791155_g36954_i0reverse_frame_3 - 0.00022 21.2 0.4 0.0024 17.9 0.1 2.2 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_44702_length_442_cov_173.791155_g36954_i0reverse_frame_3 - 0.0014 18.8 0.0 0.0044 17.3 0.0 1.7 2 0 0 2 2 2 1 Kelch motif Kelch_3 PF13415.6 NODE_44702_length_442_cov_173.791155_g36954_i0reverse_frame_3 - 0.0032 17.7 0.1 0.01 16.1 0.0 1.9 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_44702_length_442_cov_173.791155_g36954_i0reverse_frame_3 - 0.045 13.8 0.2 0.25 11.4 0.0 2.2 2 0 0 2 2 2 0 Kelch motif RNase_P_p30 PF01876.16 NODE_44702_length_442_cov_173.791155_g36954_i0forward_frame_3 - 0.085 12.3 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 RNase P subunit p30 YjbT PF17089.5 NODE_44702_length_442_cov_173.791155_g36954_i0forward_frame_2 - 0.11 12.5 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family RelB_leu_zip PF16180.5 NODE_44700_length_442_cov_233.427518_g36952_i0forward_frame_3 - 0.58 10.2 3.7 5.8 7.0 0.5 2.3 2 0 0 2 2 2 0 RelB leucine zipper MORN PF02493.20 NODE_44696_length_442_cov_316.024570_g36948_i0reverse_frame_3 - 2.1e-06 27.3 25.1 3.1e-05 23.6 0.9 5.0 5 1 0 5 5 5 4 MORN repeat SCF PF02404.15 NODE_44696_length_442_cov_316.024570_g36948_i0forward_frame_2 - 1.3 8.3 6.4 2 7.7 6.4 1.2 1 0 0 1 1 1 0 Stem cell factor zf-LITAF-like PF10601.9 NODE_44695_length_442_cov_377.656020_g36947_i0forward_frame_3 - 3.1e-08 33.8 3.7 4.5e-08 33.2 3.7 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain CX9C PF16860.5 NODE_44694_length_442_cov_482.390663_g36946_i0reverse_frame_3 - 0.22 11.6 0.4 0.22 11.6 0.4 1.9 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, FliP PF00813.20 NODE_44691_length_442_cov_3231.000000_g36895_i1forward_frame_3 - 0.74 9.7 3.4 1.2 9.0 0.2 2.0 1 1 1 2 2 2 0 FliP family Blt1 PF12754.7 NODE_44688_length_443_cov_1.580882_g36943_i0reverse_frame_3 - 8.3 6.7 5.8 14 6.0 0.9 2.7 1 1 2 3 3 3 0 Blt1 N-terminal domain DUF2199 PF09965.9 NODE_44684_length_443_cov_2.590686_g36939_i0forward_frame_2 - 0.23 11.5 2.0 11 6.1 0.4 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2199) SOBP PF15279.6 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_2 - 0.046 14.3 1.7 0.05 14.2 1.7 1.1 1 0 0 1 1 1 0 Sine oculis-binding protein Secretin_N_2 PF07655.13 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_3 - 0.16 12.5 11.1 0.24 12.0 11.1 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain CDK2AP PF09806.9 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_3 - 1 9.4 4.2 1.4 9.0 4.2 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein FAM199X PF15814.5 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_3 - 2.9 6.9 11.6 3.5 6.6 11.6 1.1 1 0 0 1 1 1 0 Protein family FAM199X LAT PF15234.6 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_3 - 0.034 13.9 2.9 0.043 13.5 2.9 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells Fe-ADH PF00465.19 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_2 - 1.5e-25 89.8 0.0 1.5e-25 89.8 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_2 - 1.1e-14 54.8 0.0 1.2e-14 54.7 0.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase ASL_C2 PF14698.6 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_2 - 0.1 13.4 0.0 0.16 12.8 0.0 1.3 1 0 0 1 1 1 0 Argininosuccinate lyase C-terminal DHQ_synthase PF01761.20 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_2 - 0.12 11.6 0.1 0.17 11.0 0.1 1.2 1 0 0 1 1 1 0 3-dehydroquinate synthase zf-B_box PF00643.24 NODE_44662_length_443_cov_79.514706_g36917_i0forward_frame_3 - 1 9.6 5.3 0.71 10.1 2.5 2.0 2 0 0 2 2 2 0 B-box zinc finger DUF5542 PF17696.1 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_3 - 0.65 10.2 2.5 0.56 10.4 0.4 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5542) TT_ORF1 PF02956.14 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_2 - 1.5 7.4 30.7 2 7.0 30.7 1.2 1 0 0 1 1 1 0 TT viral orf 1 Rrn6 PF10214.9 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_2 - 1.8 6.9 7.7 2.2 6.7 7.7 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor IHO1 PF15771.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_2 - 3.1 6.5 5.3 3.1 6.5 5.3 1.2 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 TPH PF13868.6 NODE_44658_length_443_cov_88.906863_g36913_i0reverse_frame_3 - 0.00013 20.6 30.3 0.00016 20.3 30.3 1.1 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF1682 PF07946.14 NODE_44658_length_443_cov_88.906863_g36913_i0reverse_frame_3 - 0.019 14.2 17.5 0.02 14.1 17.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Lant_dehydr_C PF14028.6 NODE_44658_length_443_cov_88.906863_g36913_i0reverse_frame_3 - 0.44 10.0 6.6 0.51 9.8 6.6 1.0 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term Atg14 PF10186.9 NODE_44658_length_443_cov_88.906863_g36913_i0reverse_frame_3 - 7.7 5.5 15.1 9.3 5.2 15.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ThiP_synth PF10120.9 NODE_44649_length_443_cov_218.625000_g36904_i0forward_frame_3 - 0.085 12.5 0.3 0.12 12.0 0.3 1.2 1 0 0 1 1 1 0 Thiamine-phosphate synthase DUF4886 PF16227.5 NODE_44632_length_444_cov_2.078240_g36887_i0reverse_frame_2 - 0.013 14.7 1.5 0.018 14.2 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4886) TAF1D PF15333.6 NODE_44632_length_444_cov_2.078240_g36887_i0reverse_frame_2 - 0.17 11.6 5.5 0.22 11.3 5.5 1.1 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D zf-SAP30 PF13866.6 NODE_44632_length_444_cov_2.078240_g36887_i0reverse_frame_2 - 0.19 11.9 2.3 0.15 12.2 0.7 1.7 2 0 0 2 2 2 0 SAP30 zinc-finger FUSC PF04632.12 NODE_44631_length_444_cov_2.212714_g36886_i0forward_frame_3 - 3e-22 78.9 4.3 3.3e-22 78.8 4.3 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family Macscav_rec PF03523.13 NODE_44630_length_444_cov_2.325183_g36885_i0reverse_frame_3 - 0.073 13.0 1.0 12 5.9 0.1 2.8 2 1 0 2 2 2 0 Macrophage scavenger receptor EAL PF00563.20 NODE_44630_length_444_cov_2.325183_g36885_i0forward_frame_2 - 1.1e-25 90.6 0.0 1.3e-25 90.3 0.0 1.1 1 0 0 1 1 1 1 EAL domain EcoRII-N PF09217.10 NODE_44627_length_444_cov_2.474328_g36882_i0forward_frame_3 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease EcoRII, N-terminal DUF4834 PF16118.5 NODE_44625_length_444_cov_2.574572_g36880_i0forward_frame_2 - 0.022 15.7 0.1 0.036 15.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) TMEM154 PF15102.6 NODE_44625_length_444_cov_2.574572_g36880_i0forward_frame_2 - 0.14 12.0 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 TMEM154 protein family DNA_methylase PF00145.17 NODE_44624_length_444_cov_2.645477_g36879_i0forward_frame_3 - 2.2e-05 24.0 0.0 2.8e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Rotamase PF00639.21 NODE_44623_length_444_cov_2.819071_g36878_i0reverse_frame_2 - 0.077 14.0 0.8 0.13 13.2 0.5 1.5 2 0 0 2 2 2 0 PPIC-type PPIASE domain YejG PF13989.6 NODE_44622_length_444_cov_2.885086_g36877_i0forward_frame_3 - 9.4e-48 161.1 0.0 1.1e-47 160.8 0.0 1.1 1 0 0 1 1 1 1 YejG-like protein NRho PF16733.5 NODE_44622_length_444_cov_2.885086_g36877_i0forward_frame_3 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Rhomboid N-terminal domain McrBC PF10117.9 NODE_44618_length_444_cov_3.254279_g36873_i0reverse_frame_2 - 0.0095 15.1 0.1 0.011 14.9 0.1 1.1 1 0 0 1 1 1 1 McrBC 5-methylcytosine restriction system component DUF4355 PF14265.6 NODE_44618_length_444_cov_3.254279_g36873_i0reverse_frame_2 - 0.085 13.1 0.1 0.2 11.9 0.0 1.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4355) AstA PF04958.12 NODE_44615_length_444_cov_3.779951_g36870_i0forward_frame_2 - 1.4e-12 46.8 0.0 1.6e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 Arginine N-succinyltransferase beta subunit Crinivirus_P26 PF07416.11 NODE_44614_length_444_cov_3.951100_g36869_i0forward_frame_2 - 0.033 13.9 0.0 0.045 13.5 0.0 1.1 1 0 0 1 1 1 0 Crinivirus P26 protein RPS31 PF17067.5 NODE_44613_length_444_cov_4.449878_g36868_i0forward_frame_2 - 3.2 8.0 5.8 1.1 9.5 1.7 1.9 1 1 0 2 2 2 0 Ribosomal protein S31e CFC PF09443.10 NODE_44610_length_444_cov_8.696822_g36865_i0forward_frame_2 - 0.14 12.0 4.6 0.24 11.3 4.6 1.3 1 0 0 1 1 1 0 Cripto_Frl-1_Cryptic (CFC) Glycos_transf_1 PF00534.20 NODE_44606_length_444_cov_58.782396_g36861_i0reverse_frame_2 - 0.11 12.0 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 Phenyl_P_gamma PF09662.10 NODE_44604_length_444_cov_70.044010_g36859_i0forward_frame_2 - 0.019 15.1 0.0 0.031 14.4 0.0 1.3 1 0 0 1 1 1 0 Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma) DUF2535 PF10751.9 NODE_44603_length_444_cov_71.432763_g36858_i0forward_frame_3 - 0.091 13.3 0.8 0.44 11.1 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2535) GAPT PF11770.8 NODE_44600_length_444_cov_77.853301_g36855_i0forward_frame_2 - 1.3 8.9 2.7 1.6 8.6 1.4 1.8 1 1 0 2 2 2 0 GRB2-binding adapter (GAPT) DUF4946 PF16304.5 NODE_44598_length_444_cov_80.711491_g36853_i0reverse_frame_2 - 0.084 12.6 0.1 0.13 12.0 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4946) CHIPS PF11434.8 NODE_44595_length_444_cov_89.606357_g36850_i0reverse_frame_3 - 0.098 12.5 0.1 0.17 11.7 0.1 1.4 1 0 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS Sporozoite_P67 PF05642.11 NODE_44595_length_444_cov_89.606357_g36850_i0reverse_frame_2 - 0.47 8.5 0.5 0.56 8.2 0.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen X PF00739.19 NODE_44593_length_444_cov_92.735941_g36848_i0reverse_frame_2 - 5.4 7.1 13.1 0.054 13.6 5.6 1.6 2 0 0 2 2 2 0 Trans-activation protein X LSM PF01423.22 NODE_44579_length_444_cov_204.753056_g35319_i1reverse_frame_3 - 1.1e-08 34.7 0.1 2e-08 33.8 0.1 1.5 2 0 0 2 2 2 1 LSM domain Serum_albumin PF00273.20 NODE_44577_length_444_cov_270.376528_g36833_i0forward_frame_3 - 0.063 13.1 0.2 0.083 12.6 0.2 1.2 1 0 0 1 1 1 0 Serum albumin family DIM1 PF02966.16 NODE_44574_length_444_cov_527.264059_g36830_i0reverse_frame_2 - 6.2e-67 223.4 0.2 7.1e-67 223.2 0.2 1.0 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin PF00085.20 NODE_44574_length_444_cov_527.264059_g36830_i0reverse_frame_2 - 0.00028 20.8 0.0 0.00035 20.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 NODE_44574_length_444_cov_527.264059_g36830_i0reverse_frame_2 - 0.051 13.9 0.2 0.074 13.4 0.2 1.3 1 0 0 1 1 1 0 Thioredoxin-like UPF0054 PF02130.17 ORF9983 - 0.019 14.8 1.0 0.041 13.7 1.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein family UPF0054 DUF4640 PF15480.6 ORF99427 - 0.013 15.3 5.8 0.013 15.2 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4640) Mucin15 PF15672.5 ORF99427 - 0.017 14.7 7.9 0.017 14.6 7.9 1.1 1 0 0 1 1 1 0 Cell-membrane associated Mucin15 DUF3539 PF12058.8 ORF99427 - 0.022 14.9 0.8 0.058 13.5 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3539) Methyltransf_21 PF05050.12 ORF99310 - 3.8e-05 23.8 0.0 4.6e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain RNHCP PF12647.7 ORF97783 - 0.02 14.9 0.6 0.076 13.0 0.0 1.9 2 0 0 2 2 2 0 RNHCP domain DUF983 PF06170.12 ORF97783 - 0.24 11.8 1.2 0.52 10.8 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF983) Flavodoxin_1 PF00258.25 ORF9776 - 4.4e-23 82.1 0.0 4.9e-23 81.9 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin FMN_red PF03358.15 ORF9776 - 0.075 12.8 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 NADPH-dependent FMN reductase Phosphodiest PF01663.22 ORF9776 - 0.19 11.3 0.0 0.24 10.9 0.0 1.1 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase SDF PF00375.18 ORF96863 - 3.4e-41 141.6 8.2 3.8e-41 141.4 8.2 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family DUF1440 PF07274.12 ORF94305 - 0.12 12.7 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1440) 2OG-FeII_Oxy_5 PF13759.6 ORF93558 - 1.7e-11 44.4 1.1 8.2e-10 39.0 1.1 2.3 1 1 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase Ax_dynein_light PF10211.9 ORF93004 - 1.4e-59 201.2 14.0 1.5e-59 201.1 14.0 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF93004 - 0.00032 21.2 6.1 0.00045 20.7 6.1 1.2 1 0 0 1 1 1 1 Syntaxin 6, N-terminal LegC3_N PF18654.1 ORF93004 - 0.00057 19.2 6.5 0.00065 19.0 6.5 1.1 1 0 0 1 1 1 1 LegC3 N-terminal coiled-coil domain DUF4988 PF16378.5 ORF93004 - 0.026 14.2 2.5 0.044 13.5 2.5 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF724 PF05266.14 ORF93004 - 0.026 14.3 10.8 0.038 13.8 10.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ZapB PF06005.12 ORF93004 - 0.029 14.8 13.4 0.061 13.8 13.4 1.5 1 0 0 1 1 1 0 Cell division protein ZapB DUF4527 PF15030.6 ORF93004 - 0.052 13.0 2.8 0.064 12.7 2.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) FapA PF03961.13 ORF93004 - 0.099 11.2 9.6 0.11 11.1 9.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A STAT_alpha PF01017.20 ORF93004 - 0.1 12.5 10.4 0.17 11.8 10.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain XhlA PF10779.9 ORF93004 - 0.11 12.7 6.5 0.27 11.5 6.5 1.6 1 0 0 1 1 1 0 Haemolysin XhlA DUF3450 PF11932.8 ORF93004 - 0.13 11.5 6.6 0.18 11.1 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DivIC PF04977.15 ORF93004 - 0.26 11.1 13.6 0.067 13.0 7.2 2.4 1 1 1 2 2 2 0 Septum formation initiator GrpE PF01025.19 ORF93004 - 1.1 8.9 14.4 0.99 9.0 13.4 1.4 2 0 0 2 2 2 0 GrpE DUF4164 PF13747.6 ORF93004 - 1.3 9.3 11.3 4 7.8 1.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) KIP1 PF07765.12 ORF93004 - 1.7 8.8 8.8 4.2 7.6 8.5 1.8 1 1 0 1 1 1 0 KIP1-like protein DUF5320 PF17253.2 ORF93004 - 2 9.5 7.7 5.2 8.2 1.7 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5320) APG6_N PF17675.1 ORF93004 - 7.2 7.1 17.4 12 6.5 17.4 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region RCC1_2 PF13540.6 ORF9159 - 0.0043 16.8 9.8 2.1 8.2 0.9 3.7 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 ORF9159 - 0.2 10.1 0.5 19 3.6 0.0 2.7 1 1 1 3 3 3 0 Putative S-adenosyl-L-methionine-dependent methyltransferase malic PF00390.19 ORF91096 - 1.4e-16 60.8 1.9 2.1e-13 50.5 1.8 2.4 1 1 1 2 2 2 2 Malic enzyme, N-terminal domain Malate_DH PF12434.8 ORF91096 - 0.04 14.0 0.1 0.063 13.3 0.1 1.3 1 0 0 1 1 1 0 Malate dehydrogenase enzyme GSH_synthase PF03199.15 ORF90699 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Sugar_tr PF00083.24 ORF8998 - 1.9e-11 43.5 6.7 2e-11 43.4 6.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Zea_mays_MuDR PF05928.11 ORF8858 - 0.016 14.8 1.6 0.058 13.0 0.0 2.0 2 0 0 2 2 2 0 Zea mays MURB-like protein (MuDR) MKT1_C PF12246.8 ORF8858 - 0.049 12.9 1.0 1.6 8.0 0.0 2.1 1 1 1 2 2 2 0 Temperature dependent protein affecting M2 dsRNA replication RRM_1 PF00076.22 ORF86937 - 2.9e-16 59.0 0.9 1.2e-15 57.0 0.9 2.0 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF86937 - 0.00048 20.2 0.1 0.00079 19.5 0.1 1.4 1 0 0 1 1 1 1 RNA recognition motif PHM7_cyt PF14703.6 ORF86937 - 0.00077 19.7 7.6 0.0047 17.2 0.1 2.9 1 1 2 3 3 3 2 Cytosolic domain of 10TM putative phosphate transporter SLATT_5 PF18160.1 ORF86937 - 2.3 7.5 5.1 3.5 6.9 5.1 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Pkinase PF00069.25 ORF86856 - 2.9e-28 99.0 0.3 3.7e-28 98.6 0.3 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86856 - 1.7e-20 73.4 0.1 2e-20 73.2 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase RHH_8 PF17723.1 ORF86856 - 0.045 13.9 0.1 0.062 13.5 0.1 1.2 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family NAD_Gly3P_dh_N PF01210.23 ORF86856 - 0.073 13.0 0.0 0.088 12.8 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UQ_con PF00179.26 ORF86032 - 6.6e-52 174.9 0.0 7.4e-52 174.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF86032 - 0.0001 22.0 0.0 0.00013 21.7 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 ORF86032 - 0.012 15.5 0.0 0.018 14.9 0.0 1.3 1 0 0 1 1 1 0 UEV domain RWD PF05773.22 ORF86032 - 0.032 14.5 0.0 0.047 14.0 0.0 1.3 1 0 0 1 1 1 0 RWD domain DUF3410 PF11890.8 ORF85807 - 0.026 14.3 3.6 0.14 12.0 3.6 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3410) Circo_capsid PF02443.15 ORF85167 - 0.12 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Circovirus capsid protein MORN PF02493.20 ORF84519 - 7.2e-06 25.6 6.9 0.0019 17.9 0.1 4.2 3 1 0 3 3 3 3 MORN repeat Myosin_N PF02736.19 ORF84460 - 0.15 12.0 0.0 18 5.3 0.0 2.4 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain PE_PPE_C PF12484.8 ORF84313 - 0.27 12.2 9.4 0.074 14.0 5.2 1.9 1 1 0 2 2 2 0 Polymorphic PE/PPE proteins C terminal UPF0121 PF03661.13 ORF84114 - 2.3e-13 50.1 1.3 2.8e-13 49.8 1.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0121) Putative_PNPOx PF01243.20 ORF83344 - 0.057 13.6 0.0 0.09 13.0 0.0 1.3 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase MORN PF02493.20 ORF82200 - 9.2e-07 28.4 12.7 2.5e-05 23.9 2.2 4.7 4 0 0 4 4 4 2 MORN repeat DUF5124 PF17160.4 ORF82200 - 0.0067 17.2 0.3 0.012 16.4 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF5124) NAC PF01849.18 ORF81411 - 1.9e-25 88.6 0.0 3.4e-25 87.8 0.0 1.4 1 0 0 1 1 1 1 NAC domain dCache_1 PF02743.18 ORF81411 - 0.026 14.3 0.0 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 Cache domain DUF3293 PF11697.8 ORF81411 - 0.046 14.2 0.0 0.11 13.0 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3293) DUF3035 PF11233.8 ORF81100 - 0.04 14.2 0.2 0.047 14.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) PTPRCAP PF15713.5 ORF81100 - 6.2 7.1 9.0 8.9 6.6 9.0 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated DUF775 PF05603.12 ORF79113 - 0.012 15.1 0.1 0.015 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF775) DUF4834 PF16118.5 ORF79113 - 0.73 10.8 2.7 1.1 10.2 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) AcylCoA_dehyd_C PF12186.8 ORF78935 - 0.0026 17.9 0.6 0.005 17.0 0.6 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase C terminal Wbp11 PF09429.10 ORF78935 - 0.015 15.7 2.5 0.015 15.7 2.5 1.8 2 1 0 2 2 2 0 WW domain binding protein 11 CENP-S PF15630.6 ORF78935 - 0.038 14.4 0.3 0.066 13.6 0.3 1.4 1 0 0 1 1 1 0 CENP-S protein DUF2452 PF10504.9 ORF78935 - 0.058 12.9 1.9 0.091 12.2 1.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2452) DUF3276 PF11680.8 ORF78935 - 0.11 12.7 5.0 0.091 12.9 3.8 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3276) Imm30 PF15565.6 ORF78935 - 0.25 11.4 4.1 1.2 9.2 0.5 2.1 1 1 1 2 2 2 0 Immunity protein 30 EST1 PF10374.9 ORF78935 - 0.58 10.8 3.0 0.99 10.0 3.0 1.5 1 1 0 1 1 1 0 Telomerase activating protein Est1 UQ_con PF00179.26 ORF77509 - 1e-23 83.5 0.1 1.1e-23 83.4 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF77509 - 0.04 14.2 0.0 0.051 13.9 0.0 1.3 1 0 0 1 1 1 0 RWD domain AAA_lid_7 PF17867.1 ORF7743 - 0.064 13.5 0.0 0.097 12.9 0.0 1.3 1 0 0 1 1 1 0 Midasin AAA lid domain DUF3242 PF11586.8 ORF77 - 0.066 13.0 0.7 0.14 11.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3242) DUF960 PF06124.11 ORF77 - 0.072 13.8 2.4 0.17 12.5 0.7 2.4 2 1 0 2 2 2 0 Staphylococcal protein of unknown function (DUF960) Chromo_2 PF18704.1 ORF76589 - 0.051 13.8 0.2 0.099 12.9 0.2 1.5 1 0 0 1 1 1 0 Chromatin organization modifier domain 2 TPR_7 PF13176.6 ORF75477 - 0.14 12.3 0.0 0.32 11.1 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat Troponin-I_N PF11636.8 ORF75477 - 0.26 11.2 3.4 1.1 9.3 0.3 2.7 3 0 0 3 3 3 0 Troponin I residues 1-32 LuxS PF02664.15 ORF75107 - 2.2e-51 173.6 0.0 2.6e-51 173.4 0.0 1.0 1 0 0 1 1 1 1 S-Ribosylhomocysteinase (LuxS) DUF749 PF05370.11 ORF75107 - 0.091 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF749) TPR_1 PF00515.28 ORF74520 - 1.2e-08 34.4 0.0 1.6e-05 24.5 0.1 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF74520 - 1.5e-08 34.1 0.1 0.00031 20.6 0.1 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF74520 - 0.00038 20.5 4.3 0.00081 19.5 4.3 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat DnaJ PF00226.31 ORF74520 - 0.00041 20.4 0.0 0.0011 19.1 0.0 1.7 1 0 0 1 1 1 1 DnaJ domain TPR_7 PF13176.6 ORF74520 - 0.0035 17.3 2.0 0.06 13.4 0.9 3.0 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF74520 - 0.0055 17.0 2.7 0.042 14.1 1.7 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF74520 - 0.01 16.2 0.6 4.9 7.8 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF74520 - 0.062 13.5 0.3 5.3 7.5 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF74520 - 0.066 14.1 3.9 7.3 7.7 0.6 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF74520 - 0.39 10.7 2.5 1.6 8.7 0.2 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat NtCtMGAM_N PF16863.5 ORF74513 - 0.023 14.9 0.3 0.042 14.0 0.3 1.4 1 0 0 1 1 1 0 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase LRR_6 PF13516.6 ORF74353 - 2.6e-05 23.9 0.6 0.031 14.3 0.0 3.6 4 0 0 4 4 4 3 Leucine Rich repeat GSH_synthase PF03199.15 ORF74035 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase FtsJ PF01728.19 ORF73303 - 4.8e-33 114.7 0.0 5.8e-33 114.5 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 ORF73303 - 0.018 14.9 0.1 0.044 13.6 0.1 1.6 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 ORF73303 - 0.039 14.6 0.0 0.083 13.6 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Mrx7 PF10906.8 ORF73171 - 0.011 16.0 0.2 0.024 14.9 0.2 1.7 1 1 0 1 1 1 0 MIOREX complex component 7 TnpW PF14202.6 ORF73160 - 0.089 12.6 0.2 0.25 11.2 0.0 1.7 2 0 0 2 2 2 0 Transposon-encoded protein TnpW CEBP_ZZ PF16366.5 ORF72783 - 0.00012 22.3 3.4 0.00018 21.7 3.4 1.3 1 0 0 1 1 1 1 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-B_box PF00643.24 ORF72783 - 0.00035 20.7 7.6 0.00051 20.1 7.6 1.2 1 0 0 1 1 1 1 B-box zinc finger zf-C3HC4_3 PF13920.6 ORF72783 - 0.17 11.8 6.3 0.24 11.3 6.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) ETRAMP PF09716.10 ORF72628 - 0.13 12.3 0.9 0.22 11.6 0.9 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) CRAL_TRIO_N PF03765.15 ORF72515 - 6.8e-06 26.2 0.9 2e-05 24.7 0.2 2.1 2 0 0 2 2 2 1 CRAL/TRIO, N-terminal domain CRAL_TRIO PF00650.20 ORF72515 - 0.039 13.7 0.1 0.07 12.8 0.1 1.4 1 0 0 1 1 1 0 CRAL/TRIO domain Ank_2 PF12796.7 ORF72278 - 5.9e-34 116.5 0.2 1.5e-14 54.3 0.0 2.6 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF72278 - 7.1e-29 99.8 1.8 4.8e-09 36.6 0.0 3.6 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF72278 - 2.8e-26 90.8 0.2 8.6e-07 29.1 0.0 4.8 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF72278 - 1.2e-25 89.2 0.8 4.7e-09 36.3 0.0 4.0 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF72278 - 1.2e-20 71.4 0.1 2.1e-05 24.6 0.0 4.4 5 0 0 5 5 5 3 Ankyrin repeat EF-hand_1 PF00036.32 ORF72216 - 4.6e-30 100.9 13.6 3.7e-09 35.5 0.1 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF72216 - 1e-27 96.4 10.2 1.3e-13 51.2 1.6 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF72216 - 1.3e-27 93.3 11.6 6.3e-09 35.1 0.1 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF72216 - 2.7e-21 74.0 14.5 7.2e-06 25.3 0.1 4.3 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF72216 - 3.9e-14 52.2 12.8 9.2e-06 25.4 1.0 3.9 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF72216 - 7.4e-08 32.6 0.0 0.0098 16.2 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain Caleosin PF05042.13 ORF72216 - 8.7e-07 29.0 0.7 0.016 15.2 0.0 3.8 1 1 2 4 4 4 2 Caleosin related protein SPARC_Ca_bdg PF10591.9 ORF72216 - 1.5e-05 25.3 1.5 0.072 13.4 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_14 PF17959.1 ORF72216 - 0.00061 20.1 1.6 0.12 12.7 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain DUF2666 PF10869.8 ORF72216 - 0.0098 16.1 4.5 1.1 9.5 0.1 2.8 1 1 2 3 3 3 2 Protein of unknown function (DUF2666) TerB PF05099.13 ORF72216 - 0.01 15.8 1.0 0.86 9.6 0.0 2.7 1 1 2 3 3 3 0 Tellurite resistance protein TerB EF-hand_11 PF08976.11 ORF72216 - 0.028 15.3 0.2 1 10.2 0.0 2.2 1 1 1 2 2 2 0 EF-hand domain EF-hand_4 PF12763.7 ORF72216 - 0.054 13.4 5.5 8.7 6.4 0.5 3.3 1 1 2 3 3 3 0 Cytoskeletal-regulatory complex EF hand Glycos_trans_3N PF02885.17 ORF72216 - 0.066 13.1 0.8 3.6 7.5 0.1 2.5 1 1 1 2 2 2 0 Glycosyl transferase family, helical bundle domain SpaA PF17802.1 ORF72216 - 0.15 12.4 1.1 7.9 6.9 1.1 2.6 1 1 0 1 1 1 0 Prealbumin-like fold domain Toprim_2 PF13155.6 ORF72216 - 0.17 12.3 0.9 6.2 7.3 0.1 2.9 1 1 2 3 3 3 0 Toprim-like EF-hand_10 PF14788.6 ORF72216 - 0.98 9.3 4.6 1.3 8.9 0.2 2.8 2 1 1 3 3 3 0 EF hand DUF1406 PF07190.11 ORF71263 - 0.013 15.4 0.1 0.016 15.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1406) HTH_AraC PF00165.23 ORF70958 - 0.025 14.7 0.3 0.025 14.7 0.3 2.4 3 0 0 3 3 3 0 Bacterial regulatory helix-turn-helix proteins, AraC family Metallophos_2 PF12850.7 ORF70339 - 0.00021 21.6 0.4 0.0012 19.1 0.4 2.0 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Cation_efflux PF01545.21 ORF70079 - 0.034 13.9 0.0 0.042 13.6 0.0 1.1 1 0 0 1 1 1 0 Cation efflux family GSH_synthase PF03199.15 ORF68032 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Sa_NUDIX PF18167.1 ORF67858 - 0.025 14.4 0.1 0.037 13.8 0.1 1.2 1 0 0 1 1 1 0 SMODS-associated NUDIX domain Phos_pyr_kin PF08543.12 ORF67858 - 0.057 12.8 0.1 0.08 12.3 0.1 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Phage_holin_6_1 PF09682.10 ORF67858 - 0.058 13.8 2.4 1.4 9.4 0.5 2.1 1 1 1 2 2 2 0 Bacteriophage holin of superfamily 6 (Holin_LLH) zf-RING_9 PF13901.6 ORF67858 - 0.085 12.8 0.1 0.094 12.7 0.1 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon MMgT PF10270.9 ORF67299 - 0.065 13.6 0.0 0.087 13.2 0.0 1.2 1 0 0 1 1 1 0 Membrane magnesium transporter DUF1860 PF08949.10 ORF67299 - 0.19 11.5 0.0 0.25 11.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1860) GSH_synthase PF03199.15 ORF67004 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase GSH_synthase PF03199.15 ORF65714 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Remorin_C PF03763.13 ORF64867 - 0.029 14.3 2.7 0.047 13.6 2.7 1.4 1 0 0 1 1 1 0 Remorin, C-terminal region GSH_synthase PF03199.15 ORF6464 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase PABP PF00658.18 ORF64561 - 4.9e-11 42.6 0.1 7.1e-11 42.1 0.1 1.2 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain DUF4106 PF13388.6 ORF64561 - 1.6 7.9 11.2 1.9 7.6 11.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) Haem_degrading PF03928.14 ORF64033 - 5.5e-29 100.6 3.0 6.1e-29 100.5 3.0 1.0 1 0 0 1 1 1 1 Haem-degrading Ribosomal_L27A PF00828.19 ORF63842 - 9.4e-24 84.5 0.1 1.3e-23 84.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ThrE PF06738.12 ORF63546 - 1.5e-26 93.3 0.0 1.7e-26 93.1 0.0 1.0 1 0 0 1 1 1 1 Putative threonine/serine exporter PMSR PF01625.21 ORF62839 - 2.7e-17 63.3 0.4 4.6e-17 62.6 0.2 1.4 2 0 0 2 2 2 1 Peptide methionine sulfoxide reductase MORN PF02493.20 ORF60163 - 7.2e-06 25.6 6.9 0.0019 17.9 0.1 4.2 3 1 0 3 3 3 3 MORN repeat DUF438 PF04282.13 ORF59593 - 0.0068 16.3 0.0 1 9.3 0.1 2.4 2 0 0 2 2 2 2 Family of unknown function (DUF438) YppF PF14178.6 ORF59593 - 0.06 13.2 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 YppF-like protein RRF PF01765.19 ORF59593 - 0.11 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Ribosome recycling factor Sigma_reg_N PF13800.6 ORF58368 - 0.078 13.3 1.8 4.6 7.6 0.1 2.1 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Pkinase PF00069.25 ORF57472 - 2.9e-28 99.0 0.3 3.7e-28 98.6 0.3 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57472 - 1.7e-20 73.4 0.1 2e-20 73.2 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase RHH_8 PF17723.1 ORF57472 - 0.045 13.9 0.1 0.062 13.5 0.1 1.2 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family NAD_Gly3P_dh_N PF01210.23 ORF57472 - 0.073 13.0 0.0 0.088 12.8 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RCC1_2 PF13540.6 ORF56813 - 5.9e-31 105.6 22.7 1.3e-09 37.6 1.8 4.1 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF56813 - 0.00016 22.2 25.1 0.87 10.3 0.3 6.3 4 3 2 6 6 6 3 Regulator of chromosome condensation (RCC1) repeat DUF4333 PF14230.6 ORF56813 - 0.003 17.8 1.4 10 6.5 0.1 3.2 3 0 0 3 3 3 2 Domain of unknown function (DUF4333) PQQ_3 PF13570.6 ORF56813 - 0.0053 17.2 4.0 1.2 9.8 0.3 3.9 2 2 0 2 2 2 1 PQQ-like domain DUF5637 PF18687.1 ORF56813 - 3.2 7.8 7.1 88 3.2 0.1 4.3 4 0 0 4 4 4 0 Family of unknown function (DUF5637) DUF4005 PF13178.6 ORF56475 - 0.12 13.0 2.9 0.87 10.3 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4005) DUF1542 PF07564.11 ORF56111 - 0.0023 18.0 0.4 0.0068 16.5 0.4 1.9 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1542) NapD PF03927.13 ORF56111 - 0.017 15.2 0.2 0.03 14.4 0.2 1.4 1 0 0 1 1 1 0 NapD protein Rhomboid_N PF12122.8 ORF56111 - 0.094 12.9 2.4 0.12 12.5 1.0 1.8 1 1 1 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease TrbI_Ftype PF09677.10 ORF56111 - 0.13 12.6 0.8 0.37 11.1 0.1 1.9 1 1 1 2 2 2 0 Type-F conjugative transfer system protein (TrbI_Ftype) CemA PF03040.14 ORF56111 - 0.29 11.0 1.6 0.36 10.7 1.6 1.2 1 0 0 1 1 1 0 CemA family DUF3967 PF13152.6 ORF56111 - 8.6 6.2 6.9 1.3e+02 2.5 0.0 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3967) Ras PF00071.22 ORF55824 - 7.6e-14 51.6 0.0 1e-13 51.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Arf PF00025.21 ORF55824 - 0.061 12.8 0.0 0.084 12.3 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 ORF55824 - 0.16 12.0 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain HAD_SAK_1 PF10307.9 ORF54918 - 0.024 14.5 1.0 0.039 13.8 1.0 1.2 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins COMM_domain PF07258.14 ORF54911 - 8.3e-09 35.5 0.0 1.3e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 COMM domain GIT_CC PF16559.5 ORF54776 - 0.0015 18.3 0.4 0.56 10.1 0.0 2.4 2 0 0 2 2 2 2 GIT coiled-coil Rho guanine nucleotide exchange factor AKNA PF12443.8 ORF54776 - 0.0017 18.9 0.4 0.0077 16.9 0.0 2.0 1 1 1 2 2 2 1 AT-hook-containing transcription factor Cast PF10174.9 ORF54776 - 0.0054 15.0 0.9 0.0058 14.9 0.9 1.1 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone HALZ PF02183.18 ORF54776 - 0.0077 16.4 1.5 0.84 9.9 0.1 2.6 2 1 0 2 2 2 1 Homeobox associated leucine zipper HAUS-augmin3 PF14932.6 ORF54776 - 0.013 15.1 0.2 0.017 14.7 0.2 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Harakiri PF15196.6 ORF54776 - 0.019 15.4 2.5 0.046 14.2 0.3 2.1 2 0 0 2 2 2 0 Activator of apoptosis harakiri CtIP_N PF10482.9 ORF54776 - 0.043 13.9 0.4 11 6.1 0.0 2.4 2 0 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain SlyX PF04102.12 ORF54776 - 0.093 13.4 7.1 0.97 10.1 0.9 2.8 2 1 1 3 3 3 0 SlyX DUF4140 PF13600.6 ORF54776 - 0.11 12.9 3.8 13 6.3 3.8 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) TMF_TATA_bd PF12325.8 ORF54776 - 0.14 12.4 2.4 1.9 8.7 0.3 2.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 TATA binding DivIC PF04977.15 ORF54776 - 0.16 11.7 4.6 4.8 7.0 0.5 2.6 2 1 1 3 3 3 0 Septum formation initiator ZapB PF06005.12 ORF54776 - 0.22 12.0 8.1 0.79 10.2 4.3 2.6 2 1 0 2 2 2 0 Cell division protein ZapB JIP_LZII PF16471.5 ORF54776 - 0.55 10.4 3.6 12 6.2 0.1 2.5 3 0 0 3 3 3 0 JNK-interacting protein leucine zipper II bZIP_1 PF00170.21 ORF54776 - 0.71 10.0 0.1 0.71 10.0 0.1 2.9 4 0 0 4 4 2 0 bZIP transcription factor Ribosomal_L27A PF00828.19 ORF54526 - 9.4e-24 84.5 0.1 1.3e-23 84.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Oxidored_q4 PF00507.19 ORF53718 - 7.1e-31 106.3 1.1 7.1e-31 106.3 1.1 1.5 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K_trans PF02705.16 ORF53718 - 0.14 10.7 2.5 0.23 10.0 2.5 1.3 1 0 0 1 1 1 0 K+ potassium transporter Phage_holin_3_6 PF07332.11 ORF53718 - 0.15 12.1 11.4 0.39 10.8 0.2 2.1 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III TRAP_alpha PF03896.16 ORF53718 - 0.22 10.7 0.0 3.8 6.6 0.0 2.0 2 0 0 2 2 2 0 Translocon-associated protein (TRAP), alpha subunit DOMON PF03351.17 ORF53291 - 1.1e-10 41.8 0.0 1.4e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 DOMON domain DUF4695 PF15766.5 ORF53246 - 0.27 11.5 5.0 0.37 11.0 2.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4695) GSH_synthase PF03199.15 ORF5295 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase TTL PF03133.15 ORF50565 - 9.1e-07 28.3 0.0 1.1e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF50565 - 0.00039 19.8 0.0 0.00049 19.4 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF50565 - 0.011 15.0 0.0 0.014 14.7 0.0 1.1 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp SAM_Ste50p PF09235.10 ORF49665 - 1.9 8.8 4.5 6.8 7.0 0.2 2.5 3 0 0 3 3 3 0 Ste50p, sterile alpha motif DUF1230 PF06799.11 ORF49328 - 0.061 13.4 1.6 0.087 12.9 1.6 1.3 1 0 0 1 1 1 0 Conserved in the green lineage and diatoms 27 SAM_2 PF07647.17 ORF49155 - 1.3e-10 41.2 0.0 2e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_1 PF00536.30 ORF49155 - 1.4e-09 38.3 0.1 2e-09 37.7 0.1 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) API5 PF05918.11 ORF49155 - 0.02 13.7 0.4 0.023 13.5 0.4 1.0 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) SAM_Ste50p PF09235.10 ORF49155 - 0.032 14.5 0.0 0.051 13.8 0.0 1.4 1 0 0 1 1 1 0 Ste50p, sterile alpha motif DUF1499 PF07386.11 ORF47683 - 6.6e-05 23.4 0.0 0.0001 22.8 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1499) GSH_synthase PF03199.15 ORF47518 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase PUA_3 PF17785.1 ORF47375 - 0.075 12.9 0.0 0.45 10.4 0.0 2.3 2 1 0 2 2 2 0 PUA-like domain CBM9_1 PF06452.11 ORF47129 - 0.007 16.3 0.1 0.01 15.8 0.1 1.2 1 0 0 1 1 1 1 Carbohydrate family 9 binding domain-like MORN PF02493.20 ORF45448 - 8.2e-08 31.7 11.0 0.00094 18.9 1.8 3.7 3 0 0 3 3 3 2 MORN repeat QIL1 PF15884.5 ORF45448 - 0.053 14.1 0.3 0.41 11.3 0.1 2.1 2 0 0 2 2 2 0 MICOS complex subunit MIC13, QIL1 Dsh_C PF12316.8 ORF45371 - 0.025 15.0 2.0 0.03 14.7 2.0 1.1 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal zf-MYND PF01753.18 ORF4534 - 1.2e-07 31.7 12.0 1.9e-07 31.1 12.0 1.3 1 0 0 1 1 1 1 MYND finger zf-C6H2 PF15801.5 ORF4534 - 0.2 12.0 6.2 0.36 11.2 6.2 1.4 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding zf-Mss51 PF13824.6 ORF4534 - 1.7 8.8 15.0 0.16 12.1 8.6 2.5 2 2 2 4 4 4 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF3364 PF11844.8 ORF45228 - 0.014 15.6 4.4 0.048 13.9 4.4 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) GAGA_bind PF06217.12 ORF45228 - 0.65 10.2 7.6 0.69 10.2 7.6 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Ribosomal_L18p PF00861.22 ORF45228 - 0.86 10.0 5.7 0.29 11.5 3.1 1.5 2 0 0 2 2 2 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Keratin_B2_2 PF13885.6 ORF42441 - 1.6 8.7 11.6 3.2 7.8 11.6 1.5 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein Atg14 PF10186.9 ORF42423 - 0.00014 21.1 9.3 0.00017 20.8 9.3 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 UPF0242 PF06785.11 ORF42423 - 0.0039 17.3 11.2 0.0046 17.1 11.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus AAA_13 PF13166.6 ORF42423 - 0.0048 15.6 11.3 0.0054 15.4 11.3 1.0 1 0 0 1 1 1 1 AAA domain Seadorna_VP6 PF07407.11 ORF42423 - 0.0065 15.5 2.9 0.0071 15.3 2.9 1.1 1 0 0 1 1 1 1 Seadornavirus VP6 protein DUF4686 PF15742.5 ORF42423 - 0.0066 15.6 8.7 0.0066 15.6 8.7 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4686) GP57 PF17594.2 ORF42423 - 0.057 13.2 0.1 0.16 11.8 0.1 1.7 1 1 0 1 1 1 0 Phage Tail fiber assembly helper gene product 57 Fez1 PF06818.15 ORF42423 - 0.075 13.5 12.5 0.73 10.3 12.5 2.0 1 1 0 1 1 1 0 Fez1 Tup_N PF08581.10 ORF42423 - 0.16 12.3 9.8 0.12 12.7 4.2 2.6 2 1 0 2 2 2 0 Tup N-terminal PRKG1_interact PF15898.5 ORF42423 - 0.18 12.7 11.8 0.87 10.5 1.5 2.4 2 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain PEX11 PF05648.14 ORF42423 - 0.24 10.8 2.9 0.43 10.0 2.7 1.6 1 1 1 2 2 2 0 Peroxisomal biogenesis factor 11 (PEX11) CENP-F_leu_zip PF10473.9 ORF42423 - 0.45 10.5 15.6 0.25 11.4 10.9 1.9 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 APG6_N PF17675.1 ORF42423 - 0.53 10.8 14.5 0.48 10.9 13.9 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF724 PF05266.14 ORF42423 - 0.69 9.7 14.9 0.81 9.5 10.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF3573 PF12097.8 ORF42423 - 1.9 7.2 5.2 0.89 8.3 1.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3573) YabA PF06156.13 ORF42423 - 2.4 8.9 9.7 5.4 7.7 6.2 2.5 1 1 1 2 2 2 0 Initiation control protein YabA TMPIT PF07851.13 ORF42423 - 4.7 6.4 10.2 0.8 8.9 6.0 1.7 2 0 0 2 2 2 0 TMPIT-like protein DivIC PF04977.15 ORF42423 - 5.5 6.8 15.2 1.4 8.8 1.5 3.1 1 1 2 3 3 3 0 Septum formation initiator bZIP_2 PF07716.15 ORF42423 - 6.7 6.9 12.4 17 5.6 0.5 3.3 3 0 0 3 3 3 0 Basic region leucine zipper Ureide_permease PF07168.11 ORF41155 - 0.18 10.5 0.1 0.18 10.5 0.1 1.1 1 0 0 1 1 1 0 Ureide permease CDC45 PF02724.14 ORF41155 - 0.31 9.3 7.3 0.28 9.4 7.3 1.0 1 0 0 1 1 1 0 CDC45-like protein Presenilin PF01080.17 ORF41155 - 1.6 7.4 3.8 1.7 7.3 3.8 1.1 1 0 0 1 1 1 0 Presenilin Connexin PF00029.19 ORF41155 - 3.4 7.4 7.5 4.4 7.0 7.5 1.2 1 0 0 1 1 1 0 Connexin RMP PF14996.6 ORF41004 - 0.0041 17.3 1.8 0.11 12.7 1.8 2.5 1 1 0 1 1 1 1 Retinal Maintenance DUF5427 PF10310.9 ORF41004 - 0.082 11.9 2.2 0.1 11.6 2.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5427) CD99L2 PF12301.8 ORF41004 - 0.11 12.8 8.5 0.16 12.3 8.5 1.3 1 0 0 1 1 1 0 CD99 antigen like protein 2 DUF2177 PF09945.9 ORF40715 - 0.0025 17.9 11.0 0.0065 16.6 11.0 1.7 1 1 0 1 1 1 1 Predicted membrane protein (DUF2177) CW_binding_1 PF01473.20 ORF40715 - 0.11 12.8 6.2 0.11 12.8 6.2 2.3 2 0 0 2 2 2 0 Putative cell wall binding repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks152.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks152.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks152.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks152.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4005 PF13178.6 ORF39667 - 0.12 13.0 2.9 0.87 10.3 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4005) TPR_12 PF13424.6 ORF39648 - 6.1e-17 61.7 13.7 8e-09 35.7 0.1 2.2 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF39648 - 9e-13 47.6 1.5 0.0013 18.6 0.1 3.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF39648 - 3.4e-07 29.8 2.8 0.00057 19.7 0.1 3.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF39648 - 0.00065 19.6 5.3 0.086 13.0 0.1 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_5 PF12688.7 ORF39648 - 0.0027 17.9 0.4 0.0063 16.7 0.4 1.6 1 1 0 1 1 1 1 Tetratrico peptide repeat MIT PF04212.18 ORF39648 - 0.0037 17.3 0.2 0.56 10.3 0.0 2.7 2 1 1 3 3 3 1 MIT (microtubule interacting and transport) domain Anticodon_1 PF08264.13 ORF39648 - 0.013 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA TPR_1 PF00515.28 ORF39648 - 0.043 13.7 2.7 3.3 7.7 0.1 3.0 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF39648 - 0.048 14.5 3.4 5.9 8.0 0.1 2.8 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF39648 - 0.048 14.3 4.2 0.18 12.5 2.7 2.4 2 1 0 2 2 2 0 Tetratricopeptide repeat MORN PF02493.20 ORF36601 - 8.4e-09 34.8 10.7 0.00024 20.8 1.6 4.0 4 0 0 4 4 4 3 MORN repeat CDC45 PF02724.14 ORF36601 - 0.027 12.8 13.3 0.027 12.8 13.3 1.0 1 0 0 1 1 1 0 CDC45-like protein Cwf_Cwc_15 PF04889.12 ORF36601 - 1.2 8.8 19.4 1.6 8.4 19.4 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Nop14 PF04147.12 ORF36601 - 1.2 7.2 21.8 1.2 7.2 21.8 1.0 1 0 0 1 1 1 0 Nop14-like family MORN PF02493.20 ORF36452 - 1.3e-05 24.8 15.2 0.00032 20.4 2.5 4.9 5 0 0 5 5 5 2 MORN repeat DOMON PF03351.17 ORF35983 - 1.1e-10 41.8 0.0 1.4e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 DOMON domain YqfQ PF14181.6 ORF35878 - 0.011 15.9 2.2 0.019 15.1 2.2 1.3 1 0 0 1 1 1 0 YqfQ-like protein T4_Rnl2_C PF18043.1 ORF35878 - 0.091 12.9 11.1 0.8 9.9 3.0 2.6 1 1 1 2 2 2 0 T4 RNA ligase 2 C-terminal Ndr PF03096.14 ORF35878 - 0.13 11.0 0.6 0.18 10.5 0.6 1.3 1 0 0 1 1 1 0 Ndr family PMSI1 PF15322.6 ORF35878 - 0.19 11.2 0.5 0.2 11.1 0.5 1.1 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative Laminin_B PF00052.18 ORF35390 - 0.00052 19.9 0.0 0.00079 19.3 0.0 1.3 1 1 0 1 1 1 1 Laminin B (Domain IV) Arch_fla_DE PF04659.13 ORF35390 - 0.085 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Archaeal flagella protein Trp_syntA PF00290.20 ORF33998 - 0.069 12.0 0.1 0.089 11.6 0.1 1.1 1 0 0 1 1 1 0 Tryptophan synthase alpha chain GSH_synthase PF03199.15 ORF33683 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Ribosomal_L18_c PF14204.6 ORF33354 - 1.2e-24 87.0 7.2 2.2e-24 86.2 7.2 1.4 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Sorting_nexin PF03700.13 ORF33354 - 0.029 14.9 1.8 0.039 14.5 1.6 1.4 1 1 0 1 1 1 0 Sorting nexin, N-terminal domain Colicin_immun PF09204.10 ORF33354 - 0.049 14.2 0.2 0.11 13.1 0.1 1.7 1 1 0 1 1 1 0 Bacterial self-protective colicin-like immunity DUF3793 PF12672.7 ORF32383 - 0.15 12.1 0.1 0.17 11.9 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3793) ECSIT PF06239.11 ORF31504 - 0.053 12.6 1.4 0.7 9.0 0.1 2.1 1 1 0 2 2 2 0 Evolutionarily conserved signalling intermediate in Toll pathway N_BRCA1_IG PF16158.5 ORF29438 - 8.5e-07 29.7 0.0 1.3e-06 29.0 0.0 1.3 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene Spc7_C2 PF15577.6 ORF29438 - 0.068 13.3 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Spc7_C2 RPM2 PF08579.11 ORF26378 - 0.071 13.5 0.1 0.14 12.6 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial ribonuclease P subunit (RPM2) GSH_synthase PF03199.15 ORF26331 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase S4 PF01479.25 ORF25998 - 1.8e-06 27.5 0.0 3.1e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 S4 domain tRNA-synt_1b PF00579.25 ORF25998 - 0.0024 17.3 0.1 0.0033 16.8 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) RHH_4 PF13467.6 ORF24539 - 0.029 14.3 0.1 0.66 9.9 0.0 2.4 2 1 1 3 3 3 0 Ribbon-helix-helix domain UPF0121 PF03661.13 ORF24365 - 2.3e-13 50.1 1.3 2.8e-13 49.8 1.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0121) DUF4678 PF15727.5 ORF24337 - 3.9 6.6 13.2 4.8 6.3 13.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4678) Histone PF00125.24 ORF2415 - 8.3e-45 152.4 8.0 1.5e-44 151.5 8.0 1.4 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 ORF2415 - 3.2e-05 24.2 0.0 6.5e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF2415 - 0.00011 22.2 0.1 0.00021 21.4 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TFIID-31kDa PF02291.15 ORF2415 - 0.095 12.8 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit DUF2992 PF11208.8 ORF2415 - 3.3 7.9 7.7 35 4.7 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2992) CLP_protease PF00574.23 ORF2306 - 9.6e-74 247.2 0.0 1.1e-73 247.1 0.0 1.0 1 0 0 1 1 1 1 Clp protease FAM183 PF14886.6 ORF22919 - 4.2e-27 95.0 2.4 5.2e-27 94.7 2.4 1.1 1 0 0 1 1 1 1 FAM183A and FAM183B related LLC1 PF14945.6 ORF22919 - 0.014 16.0 0.5 0.019 15.5 0.5 1.4 1 0 0 1 1 1 0 Normal lung function maintenance, Low in Lung Cancer 1 protein AMP-binding_C PF13193.6 ORF20480 - 2.5e-19 70.0 0.3 4.1e-19 69.3 0.3 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF20480 - 2.7e-16 59.2 0.1 3.8e-16 58.7 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 ORF20480 - 0.008 16.5 0.1 0.011 16.0 0.1 1.5 1 1 0 1 1 1 1 AMP-binding enzyme C-terminal domain Hat1_N PF10394.9 ORF19141 - 0.0043 17.3 1.8 0.0054 17.0 1.8 1.1 1 0 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus DUF2884 PF11101.8 ORF19141 - 0.083 12.4 0.5 0.1 12.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) T4_Rnl2_C PF18043.1 ORF1903 - 0.11 12.7 13.3 0.86 9.8 5.2 2.6 1 1 1 2 2 2 0 T4 RNA ligase 2 C-terminal Ndr PF03096.14 ORF1903 - 0.15 10.8 1.2 0.21 10.3 1.2 1.3 1 0 0 1 1 1 0 Ndr family PMSI1 PF15322.6 ORF1903 - 0.2 11.1 1.5 0.21 11.0 1.5 1.1 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative YqfQ PF14181.6 ORF1903 - 0.32 11.2 4.2 0.58 10.3 4.2 1.4 1 0 0 1 1 1 0 YqfQ-like protein LysM PF01476.20 ORF18864 - 6.7e-30 102.9 0.2 1.4e-15 57.1 0.1 2.3 2 0 0 2 2 2 2 LysM domain HTH_Tnp_1 PF01527.20 ORF18864 - 1.2e-05 25.6 0.0 0.032 14.5 0.0 2.3 2 0 0 2 2 2 2 Transposase OapA PF04225.12 ORF18864 - 1.4e-05 25.0 0.1 0.15 12.2 0.0 2.6 2 1 0 2 2 2 2 Opacity-associated protein A LysM-like domain DUF3071 PF11268.8 ORF18864 - 0.0042 17.2 0.0 0.38 10.8 0.0 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF3071) PDZ_2 PF13180.6 ORF18864 - 0.013 15.8 0.5 3.4 8.1 0.1 2.3 1 1 1 2 2 2 0 PDZ domain HTH_Tnp_ISL3 PF13542.6 ORF18864 - 0.022 14.1 0.3 2.5 7.6 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 ORF18864 - 0.024 14.4 0.1 8.4 6.3 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain HTH_28 PF13518.6 ORF18864 - 0.051 13.7 0.1 12 6.1 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain DUF1804 PF08822.11 ORF18864 - 0.069 13.1 0.0 11 6.0 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1804) HTH_38 PF13936.6 ORF18864 - 0.09 12.5 0.0 13 5.7 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain DUF3918 PF13056.6 ORF18864 - 0.094 12.3 0.1 0.23 11.1 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) BrkDBD PF09607.10 ORF18864 - 0.1 12.4 0.0 12 5.8 0.0 2.3 2 0 0 2 2 2 0 Brinker DNA-binding domain Fer2_4 PF13510.6 ORF18864 - 0.1 12.6 0.0 15 5.7 0.0 2.2 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Ribosomal_S7 PF00177.21 ORF16898 - 1.5e-35 122.0 3.5 1.7e-35 121.9 3.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Metallophos PF00149.28 ORF13727 - 1.9e-23 84.0 0.1 2.2e-23 83.8 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF13727 - 0.0024 18.3 0.1 0.0043 17.4 0.1 1.5 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Metallophos_2 PF12850.7 ORF13727 - 0.1 12.8 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain GSH_synthase PF03199.15 ORF13478 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase 2OG-FeII_Oxy_2 PF13532.6 ORF13433 - 5.8e-21 75.6 0.0 7e-21 75.3 0.0 1.0 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DOMON PF03351.17 ORF13407 - 1.1e-10 41.8 0.0 1.4e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 DOMON domain GSH_synthase PF03199.15 ORF1204 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase WD40 PF00400.32 ORF112431 - 0.069 14.0 0.3 0.27 12.2 0.0 2.1 3 0 0 3 3 3 0 WD domain, G-beta repeat Pkinase PF00069.25 ORF111848 - 1e-38 133.2 0.2 1.1e-38 133.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF111848 - 2.6e-19 69.5 0.0 3.2e-19 69.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF111848 - 0.00067 19.7 0.0 0.0015 18.5 0.0 1.5 1 1 1 2 2 2 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF111848 - 0.0024 17.5 0.1 0.0033 17.1 0.1 1.2 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 ORF111848 - 0.0032 16.8 0.1 0.0042 16.5 0.1 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family PAH PF02671.21 ORF111848 - 0.027 14.6 0.0 0.059 13.5 0.0 1.5 1 0 0 1 1 1 0 Paired amphipathic helix repeat Choline_kinase PF01633.20 ORF111848 - 0.06 12.9 0.1 0.071 12.7 0.1 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase Pkinase_fungal PF17667.1 ORF111848 - 0.14 10.9 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Dicty_spore_N PF04562.12 ORF111148 - 1.2 9.9 8.8 0.4 11.4 3.4 2.1 2 0 0 2 2 2 0 Dictyostelium spore coat protein, N terminus YwiC PF14256.6 ORF110516 - 1.8 8.9 14.1 0.16 12.3 1.0 2.2 1 1 1 2 2 2 0 YwiC-like protein COBRA1 PF06209.13 ORF109921 - 0.078 11.8 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Cofactor of BRCA1 (COBRA1) Ank_5 PF13857.6 ORF107581 - 9.5e-11 41.7 0.1 1.7e-10 40.9 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF107581 - 9.6e-11 42.0 0.0 3.2e-09 37.1 0.0 2.4 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF107581 - 3.5e-10 40.3 0.0 7.4e-10 39.3 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF107581 - 4.3e-10 39.0 0.1 5.3e-06 26.4 0.1 3.5 3 1 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF107581 - 1.7e-08 34.6 0.4 8e-06 26.1 0.2 2.5 2 0 0 2 2 2 2 Ankyrin repeat B9-C2 PF07162.11 ORF107108 - 4.2e-09 36.8 0.0 5.5e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Response_reg PF00072.24 ORF106957 - 4.9e-31 107.2 0.1 5.9e-31 106.9 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain DUF4695 PF15766.5 ORF106148 - 0.27 11.5 5.0 0.37 11.0 2.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4695) adh_short_C2 PF13561.6 ORF104645 - 3e-27 95.7 0.1 4e-24 85.5 0.1 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF104645 - 7.5e-15 54.9 0.1 1e-14 54.4 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase GSH_synthase PF03199.15 ORF104206 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Mur_ligase_C PF02875.21 ORF10329 - 0.071 13.4 0.0 0.34 11.2 0.0 2.0 1 1 1 2 2 2 0 Mur ligase family, glutamate ligase domain PPR PF01535.20 ORF10329 - 1.1 9.7 3.2 3.4 8.1 3.0 1.9 2 0 0 2 2 2 0 PPR repeat K_oxygenase PF13434.6 ORF101556 - 0.79 8.8 8.4 0.98 8.5 8.4 1.1 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) DDE_Tnp_1 PF01609.21 ORF101556 - 2.8 7.5 13.5 0.11 12.1 1.5 2.0 1 1 1 2 2 2 0 Transposase DDE domain Med26_C PF15693.5 ORF101556 - 4 7.6 12.1 4.9 7.3 12.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 26 C-terminal DUF1631 PF07793.11 ORF101545 - 0.75 8.1 9.1 0.85 8.0 9.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) GSH_synthase PF03199.15 ORF101260 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase GSH_synthase PF03199.15 ORF10088 - 3.4e-28 98.1 0.6 4.9e-28 97.6 0.6 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase 2TM PF13239.6 NODE_45152_length_436_cov_1.633416_g37386_i0forward_frame_1 - 0.89 9.9 6.4 1.4 9.2 6.4 1.3 1 0 0 1 1 1 0 2TM domain SID-1_RNA_chan PF13965.6 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 0.18 10.2 4.1 0.19 10.1 4.1 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF2058 PF09831.9 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 0.23 11.6 16.6 0.28 11.3 16.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2058) Presenilin PF01080.17 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 1 8.0 4.1 1 8.0 4.1 1.1 1 0 0 1 1 1 0 Presenilin Cellulose_synt PF03552.14 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 1.7 7.1 4.4 1.9 6.9 4.4 1.1 1 0 0 1 1 1 0 Cellulose synthase AAA_11 PF13086.6 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 2.1 8.0 10.3 2.4 7.9 10.3 1.1 1 0 0 1 1 1 0 AAA domain Connexin PF00029.19 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 2.6 7.8 10.3 3.2 7.4 10.3 1.1 1 0 0 1 1 1 0 Connexin Ureide_permease PF07168.11 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 2.9 6.6 5.9 3.7 6.2 5.9 1.1 1 0 0 1 1 1 0 Ureide permease ICA69 PF04629.14 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 3.2 8.0 11.2 3.9 7.7 11.2 1.1 1 0 0 1 1 1 0 Islet cell autoantigen ICA69, C-terminal domain O-antigen_lig PF13425.6 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 4 6.1 9.3 4.5 5.9 9.3 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein LMBR1 PF04791.16 NODE_45145_length_436_cov_2.610973_g37379_i0reverse_frame_1 - 6.8 5.5 6.9 7.7 5.3 6.9 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Ribosomal_L34e PF01199.18 NODE_45117_length_436_cov_78.361596_g37351_i0reverse_frame_1 - 3.9e-41 139.2 5.9 3.9e-41 139.2 5.9 1.9 2 0 0 2 2 2 1 Ribosomal protein L34e DUF1848 PF08902.11 NODE_45117_length_436_cov_78.361596_g37351_i0reverse_frame_1 - 0.036 13.8 0.6 0.043 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1848) zf-3CxxC_2 PF17180.4 NODE_45117_length_436_cov_78.361596_g37351_i0reverse_frame_1 - 0.12 13.1 0.9 0.12 13.1 0.9 2.0 2 0 0 2 2 2 0 Zinc-binding domain DUF1977 PF09320.11 NODE_45117_length_436_cov_78.361596_g37351_i0reverse_frame_1 - 0.8 10.0 6.8 4.4 7.6 6.8 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF1977) MT PF12777.7 NODE_45094_length_436_cov_198.917706_g32584_i1reverse_frame_1 - 2.3e-06 26.9 0.5 2.6e-06 26.7 0.5 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor LRAT PF04970.13 NODE_45088_length_436_cov_743.775561_g31025_i1reverse_frame_1 - 0.00041 20.7 0.0 0.00055 20.2 0.0 1.3 1 0 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 NODE_45088_length_436_cov_743.775561_g31025_i1reverse_frame_1 - 0.0057 16.5 1.3 0.014 15.2 1.3 1.7 1 1 0 1 1 1 1 PPPDE putative peptidase domain DUF1131 PF06572.12 NODE_45075_length_437_cov_2.440299_g37313_i0forward_frame_1 - 1.9e-26 92.8 0.3 2.6e-26 92.4 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1131) CFEM PF05730.11 NODE_45069_length_437_cov_2.888060_g37307_i0forward_frame_1 - 0.7 10.0 5.7 0.48 10.6 1.1 2.2 1 1 1 2 2 2 0 CFEM domain DUF1496 PF07383.12 NODE_45065_length_437_cov_3.062189_g37303_i0reverse_frame_1 - 1.9e-23 81.7 0.6 3.7e-23 80.9 0.6 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1496) HHH_6 PF14579.6 NODE_45060_length_437_cov_3.480100_g37298_i0reverse_frame_1 - 2.3e-08 34.2 0.0 4.2e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif DNA_pol3_finger PF17657.1 NODE_45060_length_437_cov_3.480100_g37298_i0reverse_frame_1 - 2e-05 24.0 0.5 2.8e-05 23.5 0.5 1.3 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain DUF2256 PF10013.9 NODE_45047_length_437_cov_78.119403_g37285_i0reverse_frame_1 - 0.1 12.7 3.0 7.9 6.7 0.1 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) COPI_assoc PF08507.10 NODE_45036_length_437_cov_133.805970_g36277_i1reverse_frame_1 - 8.1e-08 32.4 14.0 8.2e-08 32.4 13.4 1.3 1 1 0 1 1 1 1 COPI associated protein OppC_N PF12911.7 NODE_45036_length_437_cov_133.805970_g36277_i1reverse_frame_1 - 0.12 12.4 8.1 0.52 10.3 0.2 2.4 2 1 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C DUF5560 PF17715.1 NODE_45036_length_437_cov_133.805970_g36277_i1forward_frame_1 - 0.1 12.1 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) SANT_DAMP1_like PF16282.5 NODE_45033_length_437_cov_148.761194_g37273_i0forward_frame_1 - 0.0081 16.3 0.1 0.0081 16.3 0.1 1.8 2 0 0 2 2 2 1 SANT/Myb-like domain of DAMP1 SDA1 PF05285.12 NODE_45033_length_437_cov_148.761194_g37273_i0forward_frame_1 - 0.033 13.6 3.8 0.031 13.7 3.8 1.1 1 0 0 1 1 1 0 SDA1 Usg PF06233.12 NODE_45024_length_437_cov_250.828358_g37264_i0forward_frame_1 - 0.063 13.4 0.1 0.063 13.4 0.1 1.9 2 0 0 2 2 2 0 Usg-like family DUF2968 PF11180.8 NODE_45016_length_437_cov_1321.019900_g37256_i0reverse_frame_1 - 0.0054 16.4 0.3 0.0076 15.9 0.3 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2968) DUF1664 PF07889.12 NODE_45016_length_437_cov_1321.019900_g37256_i0reverse_frame_1 - 0.13 12.3 7.4 0.061 13.4 2.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Prefoldin_2 PF01920.20 NODE_45016_length_437_cov_1321.019900_g37256_i0reverse_frame_1 - 0.37 10.8 9.9 23 5.0 9.9 2.2 1 1 0 1 1 1 0 Prefoldin subunit DHR10 PF18595.1 NODE_45016_length_437_cov_1321.019900_g37256_i0reverse_frame_1 - 0.64 10.1 8.5 1.7 8.7 2.3 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain BLOC1_2 PF10046.9 NODE_45016_length_437_cov_1321.019900_g37256_i0reverse_frame_1 - 0.95 9.8 7.9 8.3 6.8 3.0 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4094 PF13334.6 NODE_45016_length_437_cov_1321.019900_g37256_i0reverse_frame_1 - 3.3 8.2 6.1 99 3.5 6.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) Pox_polyA_pol_C PF12629.7 NODE_45016_length_437_cov_1321.019900_g37256_i0forward_frame_1 - 0.14 11.9 2.0 0.18 11.6 2.0 1.1 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase C-terminal domain Beta_lactamase3 PF17030.5 NODE_45013_length_438_cov_1.531017_g37253_i0forward_frame_1 - 0.0031 16.8 0.6 0.0048 16.2 0.6 1.2 1 0 0 1 1 1 1 Putative beta-lactamase-like family Ion_trans PF00520.31 NODE_45011_length_438_cov_1.836228_g37251_i0reverse_frame_1 - 1.5e-09 37.5 7.1 2e-09 37.1 7.1 1.1 1 0 0 1 1 1 1 Ion transport protein Glyco_trans_2_3 PF13632.6 NODE_45008_length_438_cov_2.121588_g37248_i0forward_frame_1 - 0.77 9.6 4.1 1 9.3 4.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase family group 2 PB1 PF00564.24 NODE_45002_length_438_cov_2.714640_g37242_i0reverse_frame_1 - 9e-08 32.0 0.5 1.3e-07 31.5 0.5 1.2 1 0 0 1 1 1 1 PB1 domain Cofilin_ADF PF00241.20 NODE_45002_length_438_cov_2.714640_g37242_i0reverse_frame_1 - 0.008 16.0 0.3 0.013 15.3 0.3 1.5 1 0 0 1 1 1 1 Cofilin/tropomyosin-type actin-binding protein DUF4367 PF14285.6 NODE_45002_length_438_cov_2.714640_g37242_i0reverse_frame_1 - 0.021 15.3 2.3 0.031 14.7 2.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4367) Alfin PF12165.8 NODE_45001_length_438_cov_2.717122_g37241_i0forward_frame_1 - 0.16 11.7 0.1 0.22 11.2 0.1 1.2 1 0 0 1 1 1 0 Alfin Fer4_20 PF14691.6 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 8.9e-28 96.3 2.8 1.1e-27 96.1 2.8 1.1 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_2 PF12797.7 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 0.051 13.7 2.3 0.051 13.7 2.3 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_7 PF12838.7 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 0.31 11.7 0.2 0.31 11.7 0.2 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 0.48 10.6 11.3 4.3 7.5 11.4 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 6.3 7.1 13.3 1.7 8.8 2.0 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain RuBisCO_small PF00101.20 NODE_44996_length_438_cov_4.081886_g37236_i0reverse_frame_1 - 0.074 13.0 0.1 0.36 10.8 0.1 1.9 1 1 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain SLC12 PF03522.15 NODE_44993_length_438_cov_10.178660_g37233_i0reverse_frame_1 - 8.6 5.3 16.1 9.6 5.1 16.1 1.0 1 0 0 1 1 1 0 Solute carrier family 12 zf-RING_2 PF13639.6 NODE_44990_length_438_cov_29.158809_g37230_i0reverse_frame_1 - 2.8e-06 27.5 0.2 4.4e-06 26.9 0.2 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_44990_length_438_cov_29.158809_g37230_i0reverse_frame_1 - 0.0014 18.3 0.0 0.0027 17.4 0.0 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_44990_length_438_cov_29.158809_g37230_i0reverse_frame_1 - 0.0015 18.3 0.3 0.0025 17.6 0.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_44990_length_438_cov_29.158809_g37230_i0reverse_frame_1 - 0.0021 18.3 0.1 0.004 17.4 0.1 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_44990_length_438_cov_29.158809_g37230_i0reverse_frame_1 - 0.034 14.2 0.0 0.05 13.7 0.0 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 NODE_44990_length_438_cov_29.158809_g37230_i0reverse_frame_1 - 0.053 13.5 0.3 0.087 12.8 0.3 1.3 1 0 0 1 1 1 0 zinc-RING finger domain zf-Nse PF11789.8 NODE_44990_length_438_cov_29.158809_g37230_i0reverse_frame_1 - 0.061 13.1 0.2 0.11 12.4 0.2 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4 PF00097.25 NODE_44990_length_438_cov_29.158809_g37230_i0reverse_frame_1 - 0.07 13.0 0.2 0.14 12.1 0.2 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) PEARLI-4 PF05278.12 NODE_44972_length_438_cov_102.650124_g37212_i0reverse_frame_1 - 0.21 11.1 0.1 0.26 10.8 0.1 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) DUF4604 PF15377.6 NODE_44955_length_438_cov_254.315136_g37195_i0reverse_frame_1 - 0.36 11.2 31.2 0.46 10.9 31.2 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4604) Spore_coat_CotO PF14153.6 NODE_44955_length_438_cov_254.315136_g37195_i0reverse_frame_1 - 1.8 8.4 20.1 2.2 8.2 20.1 1.0 1 0 0 1 1 1 0 Spore coat protein CotO Presenilin PF01080.17 NODE_44955_length_438_cov_254.315136_g37195_i0reverse_frame_1 - 4.1 6.1 6.2 4 6.1 6.2 1.0 1 0 0 1 1 1 0 Presenilin RNA_pol_Rpa2_4 PF06883.12 NODE_44952_length_438_cov_322.384615_g37193_i0forward_frame_1 - 1.1 9.3 2.7 51 4.0 0.0 3.2 4 1 1 5 5 5 0 RNA polymerase I, Rpa2 specific domain zf-Tim10_DDP PF02953.15 NODE_44943_length_438_cov_1019.344913_g37185_i1reverse_frame_1 - 0.017 14.8 0.3 0.047 13.3 0.3 1.7 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Mis12 PF05859.12 NODE_44943_length_438_cov_1019.344913_g37185_i1reverse_frame_1 - 0.024 14.7 1.0 0.028 14.5 1.0 1.1 1 0 0 1 1 1 0 Mis12 protein zf-Tim10_DDP PF02953.15 NODE_44942_length_438_cov_1019.357320_g37185_i0reverse_frame_1 - 0.017 14.8 0.3 0.047 13.3 0.3 1.7 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Mis12 PF05859.12 NODE_44942_length_438_cov_1019.357320_g37185_i0reverse_frame_1 - 0.029 14.4 0.9 0.034 14.2 0.9 1.1 1 0 0 1 1 1 0 Mis12 protein Uso1_p115_C PF04871.13 NODE_44932_length_439_cov_1.913366_g37178_i0reverse_frame_3 - 0.16 12.3 7.2 0.26 11.7 7.2 1.3 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region ALMT PF11744.8 NODE_44932_length_439_cov_1.913366_g37178_i0reverse_frame_2 - 6.3 5.5 11.7 7.3 5.3 11.7 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter SRP-alpha_N PF04086.13 NODE_44926_length_439_cov_2.801980_g37172_i0reverse_frame_3 - 5 7.0 8.0 5.8 6.8 8.0 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal DBINO PF13892.6 NODE_44926_length_439_cov_2.801980_g37172_i0reverse_frame_2 - 2.8 8.3 8.8 0.59 10.5 5.3 1.6 1 1 0 1 1 1 0 DNA-binding domain VIT1 PF01988.19 NODE_44926_length_439_cov_2.801980_g37172_i0forward_frame_2 - 0.51 10.2 2.5 7.4 6.4 2.5 2.5 1 1 0 1 1 1 0 VIT family Mqo PF06039.15 NODE_44922_length_439_cov_3.777228_g37168_i0reverse_frame_3 - 1.2e-29 103.3 0.3 1.5e-29 102.9 0.3 1.1 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) Phospholamban PF04272.14 NODE_44922_length_439_cov_3.777228_g37168_i0forward_frame_2 - 0.078 12.5 1.7 0.42 10.1 0.5 2.3 2 0 0 2 2 2 0 Phospholamban PapC_C PF13953.6 NODE_44920_length_439_cov_4.121287_g37166_i0reverse_frame_3 - 1e-06 28.4 0.1 1.8e-06 27.7 0.1 1.3 1 0 0 1 1 1 1 PapC C-terminal domain Hydrolase PF00702.26 NODE_44918_length_439_cov_6.920792_g37164_i0reverse_frame_3 - 0.00031 21.1 0.0 0.00045 20.6 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase EcKinase PF02958.20 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_2 - 0.0038 16.6 0.2 0.0045 16.3 0.2 1.2 1 0 0 1 1 1 1 Ecdysteroid kinase AP3D1 PF06375.11 NODE_44916_length_439_cov_38.900990_g37162_i0reverse_frame_2 - 0.076 13.3 7.6 0.11 12.7 7.6 1.3 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF443 PF04276.12 NODE_44916_length_439_cov_38.900990_g37162_i0forward_frame_2 - 1.3 8.8 17.8 0.91 9.3 16.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF443) PH_6 PF15406.6 NODE_44912_length_439_cov_59.549505_g37158_i0reverse_frame_3 - 0.042 14.1 0.3 0.086 13.1 0.2 1.6 1 1 0 1 1 1 0 Pleckstrin homology domain SopA PF13981.6 NODE_44912_length_439_cov_59.549505_g37158_i0reverse_frame_3 - 0.061 13.8 0.6 0.086 13.3 0.6 1.2 1 0 0 1 1 1 0 SopA-like central domain Holin_BhlA PF10960.8 NODE_44911_length_439_cov_63.512376_g37157_i0forward_frame_2 - 3.4 7.7 8.6 0.34 10.9 1.4 2.3 1 1 1 2 2 2 0 BhlA holin family Carbam_trans_C PF16861.5 NODE_44906_length_439_cov_83.091584_g37152_i0reverse_frame_3 - 0.032 13.8 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 Carbamoyltransferase C-terminus QueT PF06177.11 NODE_44901_length_439_cov_103.636139_g37147_i0forward_frame_2 - 0.0089 16.4 0.8 0.013 15.9 0.7 1.3 1 1 0 1 1 1 1 QueT transporter DUF3784 PF12650.7 NODE_44899_length_439_cov_111.198020_g37145_i0reverse_frame_2 - 0.02 15.0 0.5 0.029 14.5 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) DUF443 PF04276.12 NODE_44899_length_439_cov_111.198020_g37145_i0reverse_frame_2 - 0.11 12.3 0.1 0.11 12.3 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF443) SR-25 PF10500.9 NODE_44894_length_439_cov_166.732673_g37141_i0reverse_frame_2 - 0.019 14.6 11.1 0.022 14.3 11.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HA PF03457.14 NODE_44891_length_439_cov_217.856436_g37138_i0forward_frame_3 - 0.029 14.7 2.6 0.054 13.8 2.6 1.4 1 0 0 1 1 1 0 Helicase associated domain Ferrochelatase PF00762.19 NODE_44884_length_439_cov_527.487624_g37131_i0forward_frame_2 - 0.19 10.8 0.0 0.26 10.4 0.0 1.1 1 0 0 1 1 1 0 Ferrochelatase LSM PF01423.22 NODE_44880_length_439_cov_1922.344059_g37127_i0reverse_frame_2 - 2.7e-16 59.0 0.4 4.2e-16 58.4 0.4 1.3 1 0 0 1 1 1 1 LSM domain Mfa1 PF17445.2 NODE_44870_length_440_cov_2.459259_g37117_i0forward_frame_3 - 0.59 10.2 3.2 1.2 9.2 3.2 1.5 1 0 0 1 1 1 0 Mating factor A1 Tat PF00539.18 NODE_44868_length_440_cov_2.528395_g37115_i0forward_frame_2 - 0.21 11.8 1.0 0.39 10.9 1.0 1.4 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) p450 PF00067.22 NODE_44866_length_440_cov_2.748148_g37113_i0forward_frame_2 - 3.6e-33 115.0 0.0 4e-33 114.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 AMP-binding_C_2 PF14535.6 NODE_44859_length_440_cov_5.649383_g37106_i0reverse_frame_2 - 0.29 11.5 3.2 4.8 7.6 0.5 2.2 1 1 0 2 2 2 0 AMP-binding enzyme C-terminal domain DUF3687 PF12459.8 NODE_44852_length_440_cov_62.266667_g37099_i0reverse_frame_2 - 1.7 8.3 7.0 6.7 6.3 1.5 2.3 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein TPKR_C2 PF16920.5 NODE_44847_length_440_cov_83.506173_g37094_i0reverse_frame_3 - 0.0067 16.5 0.1 0.016 15.3 0.1 1.7 1 0 0 1 1 1 1 Tyrosine-protein kinase receptor C2 Ig-like domain SOXp PF12336.8 NODE_44846_length_440_cov_86.195062_g37093_i0reverse_frame_2 - 5.8 8.1 10.4 2.1e+03 -0.2 10.4 2.2 1 1 0 1 1 1 0 SOX transcription factor Rsm1 PF08600.10 NODE_44841_length_440_cov_106.923457_g37088_i0reverse_frame_2 - 1.2 9.4 5.4 0.84 9.8 0.5 2.4 2 1 0 2 2 2 0 Rsm1-like Pox_F11 PF04943.12 NODE_44838_length_440_cov_115.879012_g37085_i0reverse_frame_3 - 0.17 11.0 0.0 0.2 10.7 0.0 1.0 1 0 0 1 1 1 0 Poxvirus F11 protein DNA_pol_P_Exo PF18049.1 NODE_44827_length_440_cov_249.992593_g37074_i0forward_frame_2 - 0.13 11.6 0.1 0.16 11.3 0.1 1.1 1 0 0 1 1 1 0 DNA polymerase nu pseudo-exo DUF167 PF02594.16 NODE_44821_length_440_cov_571.061728_g37068_i0reverse_frame_3 - 2.4e-09 37.2 0.1 4.1e-09 36.4 0.1 1.3 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Curlin_rpt PF07012.12 NODE_44809_length_441_cov_2.692118_g37057_i0reverse_frame_3 - 1.8e-22 79.0 26.6 4.1e-10 39.5 3.6 3.9 1 1 3 4 4 4 4 Curlin associated repeat DUF2389 PF09493.10 NODE_44808_length_441_cov_2.751232_g37056_i0forward_frame_3 - 0.0047 17.5 0.1 0.0092 16.6 0.1 1.5 1 1 0 1 1 1 1 Tryptophan-rich protein (DUF2389) DicB PF05358.11 NODE_44808_length_441_cov_2.751232_g37056_i0forward_frame_2 - 0.094 12.9 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 DicB protein DUF1974 PF09317.11 NODE_44804_length_441_cov_3.105911_g37052_i0reverse_frame_2 - 5.1e-27 95.2 0.0 6.4e-27 94.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1974) CENP-N PF05238.13 NODE_44804_length_441_cov_3.105911_g37052_i0forward_frame_3 - 0.08 12.2 0.0 0.091 12.1 0.0 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Cript PF10235.9 NODE_44802_length_441_cov_3.344828_g37050_i0forward_frame_2 - 0.2 12.2 3.9 0.11 13.1 1.2 1.8 2 0 0 2 2 2 0 Microtubule-associated protein CRIPT LMBR1 PF04791.16 NODE_44800_length_441_cov_4.721675_g37048_i0forward_frame_3 - 4.4e-15 55.6 20.3 4.8e-15 55.5 20.3 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein DUF5436 PF17504.2 NODE_44796_length_441_cov_26.886700_g37044_i0reverse_frame_2 - 0.63 10.4 7.9 1.2 9.5 7.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5436) cNMP_binding PF00027.29 NODE_44796_length_441_cov_26.886700_g37044_i0forward_frame_2 - 0.0078 16.3 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF724 PF05266.14 NODE_44786_length_441_cov_79.943350_g37034_i0forward_frame_2 - 2.2 8.1 12.6 3.2 7.6 12.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF724) HWE_HK PF07536.14 NODE_44785_length_441_cov_82.721675_g37033_i0forward_frame_3 - 0.12 13.1 0.2 0.24 12.1 0.1 1.6 2 0 0 2 2 2 0 HWE histidine kinase AflR PF08493.10 NODE_44781_length_441_cov_91.211823_g37029_i0forward_frame_2 - 0.19 11.2 3.8 0.078 12.4 0.8 1.8 2 0 0 2 2 2 0 Aflatoxin regulatory protein GUB_WAK_bind PF13947.6 NODE_44765_length_441_cov_157.731527_g37013_i0forward_frame_3 - 0.048 14.4 0.7 0.069 13.9 0.7 1.4 1 1 0 1 1 1 0 Wall-associated receptor kinase galacturonan-binding DUF1491 PF07372.12 NODE_44764_length_441_cov_169.625616_g37012_i0reverse_frame_2 - 0.042 14.2 0.3 0.042 14.2 0.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1491) DUF2405 PF10293.9 NODE_44756_length_441_cov_415.761084_g2357_i4forward_frame_2 - 0.0083 16.1 0.1 0.013 15.5 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2405) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks153.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks153.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks153.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks153.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- eIF3_subunit PF08597.10 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 0.079 12.9 24.4 0.092 12.6 24.4 1.3 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit MAT1 PF06391.13 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 0.58 9.9 16.4 0.69 9.7 16.4 1.1 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 Red1 PF07964.11 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 3.8 5.6 6.7 4.2 5.5 6.7 1.1 1 0 0 1 1 1 0 Rec10 / Red1 NPAT_C PF15712.5 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 5.4 5.5 9.7 5.4 5.5 9.7 1.0 1 0 0 1 1 1 0 NPAT C terminus NARP1 PF12569.8 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 5.4 5.8 16.5 6.3 5.6 16.5 1.2 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 VSG_B PF13206.6 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 9.6 5.3 16.3 11 5.2 16.3 1.1 1 0 0 1 1 1 0 Trypanosomal VSG domain zf-Tim10_DDP PF02953.15 NODE_44752_length_441_cov_1013.768473_g37002_i0reverse_frame_3 - 1.7e-06 27.6 0.3 2.5e-06 27.0 0.3 1.2 1 0 0 1 1 1 1 Tim10/DDP family zinc finger DUF321 PF03778.13 NODE_44752_length_441_cov_1013.768473_g37002_i0reverse_frame_2 - 0.12 12.1 1.7 0.19 11.4 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF321) NUDIX PF00293.28 NODE_44748_length_441_cov_12956.485222_g36999_i0reverse_frame_2 - 1.9e-11 44.1 0.3 2.4e-11 43.8 0.3 1.1 1 0 0 1 1 1 1 NUDIX domain UPF0158 PF03682.13 NODE_44748_length_441_cov_12956.485222_g36999_i0reverse_frame_2 - 0.027 14.5 0.4 0.033 14.2 0.4 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) SecD-TM1 PF13721.6 ORF99861 - 0.04 14.4 0.1 0.078 13.4 0.1 1.5 1 0 0 1 1 1 0 SecD export protein N-terminal TM region Thioredoxin_4 PF13462.6 ORF98264 - 0.00054 20.2 0.0 0.00069 19.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF98264 - 0.088 12.6 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain UDPGT PF00201.18 ORF97835 - 0.019 13.8 0.1 0.019 13.8 0.1 1.1 1 0 0 1 1 1 0 UDP-glucoronosyl and UDP-glucosyl transferase CBP_BcsF PF11120.8 ORF97835 - 0.063 13.4 0.1 0.15 12.2 0.1 1.6 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF PCO_ADO PF07847.12 ORF97835 - 0.34 10.3 0.0 0.34 10.3 0.0 1.8 2 0 0 2 2 2 0 PCO_ADO Z1 PF10593.9 ORF96888 - 0.016 14.7 4.0 0.02 14.4 4.0 1.0 1 0 0 1 1 1 0 Z1 domain Exostosin PF03016.15 ORF95371 - 3e-15 56.2 0.0 3.5e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Exostosin family Ion_trans PF00520.31 ORF9464 - 4.5e-07 29.4 11.5 4.5e-07 29.4 11.5 1.9 2 0 0 2 2 2 1 Ion transport protein PKD_channel PF08016.12 ORF9464 - 0.0001 21.2 11.3 0.00015 20.6 11.3 1.2 1 0 0 1 1 1 1 Polycystin cation channel DUF1642 PF07852.11 ORF93790 - 0.16 12.6 3.6 0.35 11.5 3.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1642) Acetyltransf_10 PF13673.7 ORF93667 - 1.3e-14 54.3 0.0 1.4e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF93667 - 3.2e-13 49.9 0.0 4e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF93667 - 5.8e-13 49.1 0.0 7.8e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF93667 - 2.8e-05 24.0 0.0 4.5e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF93667 - 0.0096 16.1 0.0 0.016 15.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF93667 - 0.035 14.2 0.2 0.65 10.1 0.2 2.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_18 PF18014.1 ORF93667 - 0.053 13.4 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PanZ PF12568.8 ORF93667 - 0.15 11.8 0.0 0.36 10.5 0.0 1.7 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain, PanZ DUF1283 PF06932.11 ORF9304 - 0.085 13.1 1.3 0.14 12.4 1.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1283) DUF1298 PF06974.13 ORF91707 - 2.1e-06 27.8 0.0 2.5e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Aldo_ket_red PF00248.21 ORF91266 - 1.4e-16 60.6 0.1 2.2e-15 56.7 0.1 1.9 1 1 0 1 1 1 1 Aldo/keto reductase family VCH_CASS14 PF18315.1 ORF91266 - 0.076 13.1 0.2 0.93 9.6 0.2 2.2 1 1 0 1 1 1 0 Integron cassette protein VCH_CASS1 chain PPP4R2 PF09184.11 ORF91081 - 5.5 6.5 28.7 7.8 6.0 28.7 1.2 1 0 0 1 1 1 0 PPP4R2 Sel1 PF08238.12 ORF89963 - 6.2e-28 96.6 18.8 3.9e-09 36.9 0.5 4.1 4 0 0 4 4 4 4 Sel1 repeat Flu_M1_C PF08289.11 ORF89963 - 0.039 14.1 1.4 0.76 10.0 0.3 2.2 1 1 1 2 2 2 0 Influenza Matrix protein (M1) C-terminal domain Gsf2 PF11055.8 ORF89963 - 0.051 12.3 0.9 0.4 9.4 0.3 2.3 1 1 0 2 2 2 0 Glucose signalling factor 2 DUF4485 PF14846.6 ORF89963 - 0.37 10.9 1.2 3.8 7.6 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4485) Pkinase PF00069.25 ORF89215 - 6.2e-38 130.7 3.6 6.9e-38 130.5 3.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF89215 - 9.2e-26 90.7 0.7 1e-25 90.5 0.7 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF89215 - 4.3e-06 26.2 0.3 4.9e-06 26.0 0.3 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF89215 - 0.00071 19.2 0.7 0.00094 18.8 0.7 1.3 1 1 0 1 1 1 1 RIO1 family Haspin_kinase PF12330.8 ORF89215 - 0.0071 15.3 1.5 0.0081 15.1 1.5 1.0 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF89215 - 0.11 12.4 0.1 0.46 10.4 0.1 1.7 1 1 1 2 2 2 0 Phosphotransferase enzyme family SAS-6_N PF16531.5 ORF88086 - 0.69 10.5 7.8 1.2 9.8 7.8 1.3 1 0 0 1 1 1 0 Centriolar protein SAS N-terminal FAM60A PF15396.6 ORF88086 - 4 7.4 10.8 5.3 7.0 10.8 1.1 1 0 0 1 1 1 0 Protein Family FAM60A Pkinase PF00069.25 ORF87777 - 2.1e-34 119.1 0.0 2.5e-34 118.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF87777 - 5.1e-22 78.4 0.0 5.4e-22 78.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF87777 - 4.3e-10 39.4 0.0 5.7e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF87777 - 0.00018 20.4 0.0 0.00021 20.2 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF87777 - 0.0088 15.4 0.1 0.01 15.2 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF87777 - 0.015 14.3 0.0 0.018 14.0 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain ATP-synt_10 PF05176.14 ORF87079 - 0.14 11.4 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 ATP10 protein UDPG_MGDP_dh_C PF03720.15 ORF86806 - 2.3e-09 37.6 0.0 5.9e-09 36.3 0.0 1.7 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Aldedh PF00171.22 ORF86532 - 0.093 11.2 0.0 0.1 11.1 0.0 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family RRM_1 PF00076.22 ORF86382 - 0.085 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Sugar_tr PF00083.24 ORF85800 - 9.4e-12 44.5 6.4 1e-11 44.4 6.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MBOAT PF03062.19 ORF85520 - 8.8e-18 64.8 5.1 9.8e-18 64.6 5.1 1.0 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family Mucin PF01456.17 ORF83627 - 0.083 12.9 8.1 0.13 12.3 8.1 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein AAA_lid_6 PF17866.1 ORF83627 - 0.13 12.5 0.1 0.32 11.2 0.1 1.6 1 0 0 1 1 1 0 AAA lid domain Noc2 PF03715.13 ORF82048 - 1.8e-13 50.4 0.0 2.5e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 Noc2p family Kinesin PF00225.23 ORF81913 - 3.1e-16 59.2 0.0 3.4e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF81913 - 1.6e-11 44.4 0.0 2e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Microtubule binding ThaI PF15514.6 ORF81913 - 0.069 12.8 0.0 0.12 12.0 0.0 1.4 1 1 0 1 1 1 0 Restriction endonuclease ThaI AAA_33 PF13671.6 ORF81913 - 0.16 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain DHR-2 PF06920.13 ORF80500 - 0.015 14.0 0.8 0.018 13.7 0.8 1.1 1 0 0 1 1 1 0 Dock homology region 2 kleA_kleC PF17383.2 ORF80500 - 0.16 12.4 4.1 0.11 12.8 1.1 2.2 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A UPF0184 PF03670.13 ORF80500 - 4.8 7.6 6.5 88 3.6 6.5 2.2 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) DUF3403 PF11883.8 ORF79045 - 0.082 13.0 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3403) DNA_pol_delta_4 PF04081.13 ORF7877 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 Ret2_MD PF18528.1 ORF78453 - 0.13 12.6 0.1 0.37 11.2 0.0 1.7 2 0 0 2 2 2 0 RNA editing 3' terminal uridylyl transferase 2 middle domain Cation_ATPase PF13246.6 ORF78310 - 2 8.6 6.0 1.5 9.0 0.6 2.5 1 1 2 3 3 3 0 Cation transport ATPase (P-type) FISNA PF14484.6 ORF77393 - 1.1 9.5 6.8 4.1 7.7 1.4 3.4 2 1 0 2 2 2 0 Fish-specific NACHT associated domain LANC_like PF05147.13 ORF76792 - 5.5e-22 77.8 0.0 5.9e-22 77.7 0.0 1.0 1 0 0 1 1 1 1 Lanthionine synthetase C-like protein C5-epim_C PF06662.13 ORF76792 - 0.0049 16.4 0.0 0.0077 15.7 0.0 1.2 1 0 0 1 1 1 1 D-glucuronyl C5-epimerase C-terminus Soyouz_module PF14313.6 ORF76792 - 0.05 13.4 0.0 0.14 11.9 0.0 1.7 2 0 0 2 2 2 0 N-terminal region of Paramyxovirinae phosphoprotein (P) FKBP_C PF00254.28 ORF75690 - 4.7e-33 113.4 0.0 6.1e-33 113.0 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase WHEP-TRS PF00458.20 ORF75546 - 0.016 15.3 0.9 0.032 14.4 0.9 1.4 1 0 0 1 1 1 0 WHEP-TRS domain MAP7 PF05672.11 ORF75546 - 0.065 12.9 11.9 0.093 12.4 11.9 1.1 1 0 0 1 1 1 0 MAP7 (E-MAP-115) family Iron_permease PF04120.12 ORF75546 - 0.1 12.4 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Low affinity iron permease Presenilin PF01080.17 ORF75546 - 0.28 9.9 0.2 0.3 9.8 0.2 1.0 1 0 0 1 1 1 0 Presenilin Vfa1 PF08432.10 ORF75546 - 1.4 9.3 7.2 1.9 8.8 7.2 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 NIF PF03031.18 ORF75514 - 3e-26 92.1 0.1 3.7e-26 91.8 0.1 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Pkinase PF00069.25 ORF7533 - 2e-37 129.0 0.1 2.1e-37 128.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7533 - 6.4e-20 71.5 0.0 7.4e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF7533 - 1.1e-05 24.4 0.0 1.5e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF7533 - 0.00049 19.5 0.0 0.00073 18.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF7533 - 0.0074 15.6 0.0 0.25 10.6 0.0 2.0 2 0 0 2 2 2 1 Kinase-like APH PF01636.23 ORF7533 - 0.014 15.3 0.0 0.018 14.9 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF7533 - 0.015 14.3 0.1 0.021 13.8 0.1 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Choline_kinase PF01633.20 ORF7533 - 0.03 13.9 0.0 0.042 13.4 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase DUF1679 PF07914.11 ORF7533 - 0.092 11.6 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) Ribosomal_L37 PF08561.10 ORF75187 - 0.027 15.0 0.4 0.043 14.3 0.4 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L37 RAMP PF04901.13 ORF7463 - 0.84 9.7 3.1 0.46 10.5 0.2 1.8 2 0 0 2 2 2 0 Receptor activity modifying family UPF0242 PF06785.11 ORF74013 - 0.021 14.9 29.5 0.027 14.6 29.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF641 PF04859.12 ORF74013 - 0.062 13.6 26.8 0.35 11.2 15.3 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF4407 PF14362.6 ORF74013 - 0.065 12.6 19.6 0.074 12.4 19.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) kleA_kleC PF17383.2 ORF74013 - 0.1 13.0 1.3 0.1 13.0 1.3 2.4 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A Filament PF00038.21 ORF74013 - 0.15 11.6 30.2 0.27 10.8 27.8 2.0 1 1 0 1 1 1 0 Intermediate filament protein End3 PF12761.7 ORF74013 - 0.15 12.2 19.0 0.23 11.6 19.0 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 GrpE PF01025.19 ORF74013 - 0.17 11.5 31.4 0.37 10.4 16.4 2.6 1 1 2 3 3 3 0 GrpE Atg14 PF10186.9 ORF74013 - 0.21 10.6 25.4 0.12 11.4 21.3 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 ORF74013 - 0.46 10.7 21.4 0.52 10.5 20.4 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family YabA PF06156.13 ORF74013 - 0.5 11.0 25.7 1.3 9.7 4.8 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Pox_A_type_inc PF04508.12 ORF74013 - 0.56 10.2 10.1 6 6.9 0.2 4.2 5 0 0 5 5 3 0 Viral A-type inclusion protein repeat THOC7 PF05615.13 ORF74013 - 0.61 10.4 31.8 1.2 9.4 13.7 2.5 1 1 1 2 2 2 0 Tho complex subunit 7 TolA_bind_tri PF16331.5 ORF74013 - 0.86 9.7 31.3 8.3 6.6 18.2 2.8 1 1 1 2 2 2 0 TolA binding protein trimerisation Prefoldin_2 PF01920.20 ORF74013 - 0.97 9.4 33.1 1.7e+02 2.2 33.2 3.0 1 1 0 1 1 1 0 Prefoldin subunit DUF2730 PF10805.8 ORF74013 - 1 9.5 14.0 1.6 8.9 3.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) HisKA_3 PF07730.13 ORF74013 - 1.2 9.7 8.8 0.32 11.5 0.7 3.0 1 1 1 2 2 2 0 Histidine kinase FlxA PF14282.6 ORF74013 - 1.2 9.2 40.4 0.43 10.6 36.8 1.9 1 1 1 2 2 2 0 FlxA-like protein CENP-F_N PF10481.9 ORF74013 - 1.3 8.6 29.1 2 8.0 29.1 1.2 1 0 0 1 1 1 0 Cenp-F N-terminal domain Golgin_A5 PF09787.9 ORF74013 - 1.4 8.3 27.8 1.6 8.1 27.8 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 TadF PF16964.5 ORF74013 - 1.5 8.6 7.7 2.1 8.1 7.7 1.3 1 0 0 1 1 1 0 Putative tight adherence pilin protein F BLOC1_2 PF10046.9 ORF74013 - 1.7 9.0 23.5 0.1 12.9 6.7 2.6 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ExsD PF16806.5 ORF74013 - 1.9 8.4 18.2 24 4.8 16.1 2.0 1 1 1 2 2 2 0 Antiactivator protein ExsD USP8_interact PF08941.10 ORF74013 - 1.9 8.3 21.3 3.7 7.3 7.1 2.2 1 1 1 2 2 2 0 USP8 interacting Acetyltransf_11 PF13720.6 ORF74013 - 2 8.9 7.9 8.6 6.9 5.9 2.6 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF3450 PF11932.8 ORF74013 - 2.2 7.5 30.8 0.67 9.2 21.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Mod_r PF07200.13 ORF74013 - 2.3 8.3 28.6 18 5.4 27.6 2.1 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Exonuc_VII_L PF02601.15 ORF74013 - 2.5 7.6 15.8 3 7.3 15.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Seryl_tRNA_N PF02403.22 ORF74013 - 2.5 8.4 27.5 3.6 7.9 7.0 2.6 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Ax_dynein_light PF10211.9 ORF74013 - 2.6 7.9 33.7 0.16 11.9 22.3 2.1 1 1 1 2 2 2 0 Axonemal dynein light chain TMPIT PF07851.13 ORF74013 - 2.7 7.2 22.2 0.96 8.6 19.4 1.6 1 1 0 1 1 1 0 TMPIT-like protein CHIP_TPR_N PF18391.1 ORF74013 - 2.9 8.7 25.8 0.59 10.9 14.3 2.3 1 1 1 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain Cnn_1N PF07989.11 ORF74013 - 3 8.1 27.4 0.52 10.5 6.3 2.9 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Allexi_40kDa PF05549.11 ORF74013 - 3.7 7.0 12.9 6.3 6.2 12.8 1.5 1 1 0 1 1 1 0 Allexivirus 40kDa protein AAA_11 PF13086.6 ORF74013 - 3.8 7.2 15.3 4.9 6.9 15.3 1.3 1 0 0 1 1 1 0 AAA domain PCRF PF03462.18 ORF74013 - 4.3 7.2 21.7 3.1 7.6 5.5 2.1 1 1 1 2 2 2 0 PCRF domain NDT80_PhoG PF05224.12 ORF74013 - 4.5 7.5 10.8 6 7.0 10.8 1.1 1 0 0 1 1 1 0 NDT80 / PhoG like DNA-binding family DUF4200 PF13863.6 ORF74013 - 4.5 7.7 35.4 0.41 11.0 9.5 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF4200) WDCP PF15390.6 ORF74013 - 5.2 5.3 13.2 5.2 5.3 13.2 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family SKA1 PF07160.12 ORF74013 - 5.7 6.7 26.4 2.8 7.7 15.7 2.0 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 DivIC PF04977.15 ORF74013 - 5.7 6.8 33.7 4.9 7.0 10.0 4.4 2 1 2 4 4 4 0 Septum formation initiator CAF-1_p150 PF11600.8 ORF74013 - 6 6.5 31.0 7.9 6.2 31.0 1.1 1 0 0 1 1 1 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal Spc24 PF08286.11 ORF74013 - 6 7.2 27.7 9.7 6.5 9.8 2.6 1 1 2 3 3 3 0 Spc24 subunit of Ndc80 DUF1515 PF07439.11 ORF74013 - 6.2 6.9 10.8 16 5.6 10.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) Spc7 PF08317.11 ORF74013 - 6.2 5.6 32.9 12 4.7 32.2 1.7 1 1 1 2 2 2 0 Spc7 kinetochore protein zf-C4H2 PF10146.9 ORF74013 - 7.2 6.9 25.9 2.6 8.3 16.7 2.0 1 1 1 2 2 2 0 Zinc finger-containing protein DUF812 PF05667.11 ORF74013 - 7.5 5.3 34.8 45 2.7 34.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Phage_GPO PF05929.11 ORF74013 - 7.5 6.1 22.7 19 4.8 7.7 1.9 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF1642 PF07852.11 ORF74001 - 0.16 12.6 3.6 0.35 11.5 3.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1642) Amino_oxidase PF01593.24 ORF73698 - 2.9e-05 23.6 0.4 3.9e-05 23.1 0.4 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Neil1-DNA_bind PF09292.10 ORF73698 - 0.098 12.6 0.1 0.27 11.2 0.0 1.8 2 0 0 2 2 2 0 Endonuclease VIII-like 1, DNA bind SHIPPO-rpt PF07004.12 ORF73276 - 0.01 16.7 20.3 0.42 11.6 0.2 4.0 3 2 0 3 3 3 3 Sperm-tail PG-rich repeat Vps26 PF03643.15 ORF73243 - 2.3e-05 23.5 0.1 2.4e-05 23.5 0.1 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 26 APG6_N PF17675.1 ORF73132 - 2.1e-05 25.1 3.8 3e-05 24.5 3.8 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region Med4 PF10018.9 ORF73132 - 0.00025 20.8 5.1 0.0003 20.5 5.1 1.2 1 0 0 1 1 1 1 Vitamin-D-receptor interacting Mediator subunit 4 DUF1664 PF07889.12 ORF73132 - 0.0053 16.8 3.8 0.0075 16.3 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) PHTB1_C PF14728.6 ORF73132 - 0.0056 15.8 0.4 0.0063 15.7 0.4 1.1 1 0 0 1 1 1 1 PTHB1 C-terminus Flagellin_N PF00669.20 ORF73132 - 0.0057 16.8 1.4 0.0079 16.3 1.4 1.1 1 0 0 1 1 1 1 Bacterial flagellin N-terminal helical region COG6 PF06419.11 ORF73132 - 0.0074 14.6 7.4 0.009 14.3 7.4 1.1 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 ASD2 PF08687.11 ORF73132 - 0.012 15.2 4.4 0.014 15.0 4.4 1.1 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 PIN_12 PF16289.5 ORF73132 - 0.015 15.8 7.6 0.018 15.6 7.6 1.1 1 0 0 1 1 1 0 PIN domain Dynactin_p62 PF05502.13 ORF73132 - 0.019 13.8 2.3 0.02 13.7 2.3 1.0 1 0 0 1 1 1 0 Dynactin p62 family CALCOCO1 PF07888.11 ORF73132 - 0.024 13.5 5.2 0.025 13.5 5.2 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like TMPIT PF07851.13 ORF73132 - 0.025 13.9 5.2 0.028 13.7 5.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein End3 PF12761.7 ORF73132 - 0.057 13.6 6.1 0.064 13.4 6.1 1.1 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 SseC PF04888.12 ORF73132 - 0.075 12.6 3.7 0.094 12.3 3.7 1.1 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family UPF0242 PF06785.11 ORF73132 - 0.082 13.0 7.6 0.11 12.6 7.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Atg14 PF10186.9 ORF73132 - 0.12 11.5 5.3 0.13 11.3 5.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 USP8_interact PF08941.10 ORF73132 - 0.13 12.0 4.4 0.19 11.5 4.4 1.1 1 0 0 1 1 1 0 USP8 interacting HAUS6_N PF14661.6 ORF73132 - 0.26 10.8 5.6 0.37 10.3 5.6 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF2570 PF10828.8 ORF73132 - 1.6 8.6 10.3 2.6 7.9 10.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) Fib_alpha PF08702.10 ORF73132 - 4.3 7.5 12.2 1.1 9.5 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family YabA PF06156.13 ORF73132 - 5.3 7.7 9.0 10 6.8 9.0 1.7 1 1 0 1 1 1 0 Initiation control protein YabA DNA_pol_A_exo1 PF01612.20 ORF71207 - 2.7e-07 30.5 0.0 4e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 3'-5' exonuclease F-box PF00646.33 ORF69121 - 0.0026 17.6 0.1 0.0051 16.7 0.1 1.5 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 ORF69121 - 0.0095 15.8 0.1 0.016 15.1 0.1 1.4 1 0 0 1 1 1 1 F-box-like PB1 PF00564.24 ORF68478 - 0.09 12.7 0.1 17 5.4 0.0 2.7 3 0 0 3 3 3 0 PB1 domain Meth_synt_2 PF01717.18 ORF68478 - 0.15 11.3 0.0 0.21 10.8 0.0 1.1 1 0 0 1 1 1 0 Cobalamin-independent synthase, Catalytic domain CDC50 PF03381.15 ORF67063 - 1.2e-45 156.3 1.0 1.4e-45 156.0 1.0 1.1 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF1642 PF07852.11 ORF66701 - 0.16 12.6 3.6 0.35 11.5 3.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1642) Na_H_Exchanger PF00999.21 ORF66239 - 1.1e-10 40.9 15.1 1.3e-10 40.6 15.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family PDR_CDR PF06422.12 ORF66239 - 0.012 15.4 3.0 0.83 9.6 0.1 2.3 2 0 0 2 2 2 0 CDR ABC transporter DUF3270 PF11674.8 ORF66239 - 0.55 10.5 4.4 0.76 10.0 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) Phage_holin_5_2 PF16079.5 ORF66239 - 0.85 10.0 7.8 0.54 10.6 0.4 2.4 2 1 0 2 2 2 0 Phage holin family Hol44, in holin superfamily V RseC_MucC PF04246.12 ORF66239 - 1.2 9.1 8.9 0.98 9.4 1.1 2.1 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC EVC2_like PF12297.8 ORF66239 - 3 6.4 3.4 0.6 8.7 0.3 1.3 2 0 0 2 2 2 0 Ellis van Creveld protein 2 like protein DUF745 PF05335.13 ORF6255 - 0.054 13.2 4.2 0.042 13.6 2.6 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) HAGH_C PF16123.5 ORF6255 - 0.076 13.5 5.3 0.19 12.2 1.0 2.2 2 0 0 2 2 2 0 Hydroxyacylglutathione hydrolase C-terminus Med21 PF11221.8 ORF6255 - 0.094 13.0 11.4 0.052 13.8 9.4 1.6 1 1 1 2 2 2 0 Subunit 21 of Mediator complex G10 PF01125.17 ORF6255 - 0.36 10.6 6.1 0.24 11.2 4.4 1.5 1 1 1 2 2 2 0 G10 protein Membralin PF09746.9 ORF6255 - 2.3 7.2 9.0 4.9 6.1 9.0 1.6 1 1 0 1 1 1 0 Tumour-associated protein DUF4739 PF15893.5 ORF62539 - 0.24 10.9 0.0 0.3 10.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4739) DUF2357 PF09823.9 ORF62098 - 0.098 11.9 0.1 0.14 11.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2357) CUTL PF16557.5 ORF62098 - 4.3 7.6 8.4 2.9 8.1 5.8 2.1 1 1 1 2 2 2 0 CUT1-like DNA-binding domain of SATB MIP PF00230.20 ORF61327 - 4.1e-11 43.0 2.4 5.1e-11 42.7 2.4 1.1 1 0 0 1 1 1 1 Major intrinsic protein CxC1 PF18802.1 ORF61286 - 0.042 14.0 0.1 0.073 13.2 0.1 1.6 1 1 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases P_C PF06640.11 ORF6091 - 0.002 18.3 0.9 0.0024 18.0 0.9 1.2 1 0 0 1 1 1 1 P protein C-terminus EIIA-man PF03610.16 ORF59606 - 5.7e-30 103.9 0.0 6.5e-30 103.7 0.0 1.0 1 0 0 1 1 1 1 PTS system fructose IIA component Sugar_tr PF00083.24 ORF59295 - 1e-11 44.4 6.6 1.1e-11 44.2 6.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2085 PF09858.9 ORF59295 - 0.66 10.5 3.2 3.4 8.2 3.6 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2085) DUF1106 PF06523.11 ORF58128 - 0.003 17.5 1.0 0.019 15.0 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1106) Fer4_9 PF13187.6 ORF57282 - 0.24 11.6 7.2 2.6 8.3 7.1 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF5392 PF17370.2 ORF56965 - 0.17 12.0 0.0 0.33 11.0 0.0 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5392) Sigma_1s PF02454.16 ORF56603 - 0.03 14.3 0.6 0.038 14.0 0.6 1.2 1 0 0 1 1 1 0 Sigma 1s protein Aldedh PF00171.22 ORF56314 - 0.093 11.2 0.0 0.1 11.1 0.0 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family Shisa PF13908.6 ORF55739 - 0.00051 20.3 0.6 0.0006 20.1 0.6 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator CD34_antigen PF06365.12 ORF55739 - 0.014 15.0 0.0 0.025 14.2 0.0 1.4 1 1 0 1 1 1 0 CD34/Podocalyxin family Comm PF15957.5 ORF55739 - 0.037 14.4 0.0 0.041 14.2 0.0 1.2 1 0 0 1 1 1 0 Commissureless DUF4690 PF15756.5 ORF55739 - 0.36 11.5 0.1 0.36 11.5 0.1 2.1 2 1 0 2 2 2 0 Small Novel Rich in Cartilage DUF2358 PF10184.9 ORF55456 - 5.8e-08 33.0 0.0 6.7e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2358) SnoaL_2 PF12680.7 ORF55456 - 0.014 16.0 0.0 0.027 15.1 0.0 1.6 1 1 0 1 1 1 0 SnoaL-like domain Epiglycanin_C PF14654.6 ORF55456 - 0.08 13.0 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region NIF PF03031.18 ORF55399 - 2.1e-26 92.6 0.1 3.1e-26 92.0 0.1 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Hydrolase PF00702.26 ORF55399 - 0.071 13.4 0.3 11 6.3 0.4 2.1 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase Ax_dynein_light PF10211.9 ORF55162 - 7.3e-60 202.1 15.2 8.1e-60 202.0 15.2 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain DUF2681 PF10883.8 ORF55162 - 1.6 9.2 12.0 3.3 8.2 6.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) DivIC PF04977.15 ORF55162 - 5 7.0 9.9 1.5 8.6 5.1 2.2 1 1 1 2 2 2 0 Septum formation initiator PP-binding_2 PF14573.6 ORF54949 - 0.00016 21.8 2.2 0.00027 21.1 2.2 1.5 1 1 0 1 1 1 1 Acyl-carrier Ribosomal_L50 PF10501.9 ORF54949 - 0.00023 21.3 0.9 0.00033 20.8 0.9 1.2 1 0 0 1 1 1 1 Ribosomal subunit 39S PP-binding PF00550.25 ORF54949 - 0.0013 19.0 0.1 0.0028 18.0 0.1 1.5 1 0 0 1 1 1 1 Phosphopantetheine attachment site HofP PF10748.9 ORF53760 - 3.6e-69 230.4 2.0 4.3e-69 230.1 2.0 1.1 1 0 0 1 1 1 1 DNA utilization proteins HofP Sedlin_N PF04628.13 ORF53244 - 8.5e-34 116.5 5.4 3.4e-33 114.5 5.4 1.8 1 1 0 1 1 1 1 Sedlin, N-terminal conserved region Sybindin PF04099.12 ORF53244 - 6.8e-07 29.3 0.6 8.3e-07 29.0 0.6 1.2 1 0 0 1 1 1 1 Sybindin-like family Tubulin PF00091.25 ORF5290 - 0.018 15.3 0.0 1.7 8.8 0.0 2.2 2 0 0 2 2 2 0 Tubulin/FtsZ family, GTPase domain Nnf1 PF03980.14 ORF5290 - 0.048 14.0 0.7 7 7.1 0.1 2.3 2 1 0 2 2 2 0 Nnf1 PPP4R2 PF09184.11 ORF52817 - 5.5 6.5 28.7 7.8 6.0 28.7 1.2 1 0 0 1 1 1 0 PPP4R2 APG6_N PF17675.1 ORF51097 - 2.1e-05 25.1 3.8 3e-05 24.5 3.8 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region Med4 PF10018.9 ORF51097 - 0.00025 20.8 5.1 0.0003 20.5 5.1 1.2 1 0 0 1 1 1 1 Vitamin-D-receptor interacting Mediator subunit 4 DUF1664 PF07889.12 ORF51097 - 0.0053 16.8 3.8 0.0075 16.3 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) PHTB1_C PF14728.6 ORF51097 - 0.0056 15.8 0.4 0.0063 15.7 0.4 1.1 1 0 0 1 1 1 1 PTHB1 C-terminus Flagellin_N PF00669.20 ORF51097 - 0.0057 16.8 1.4 0.0079 16.3 1.4 1.1 1 0 0 1 1 1 1 Bacterial flagellin N-terminal helical region COG6 PF06419.11 ORF51097 - 0.0074 14.6 7.4 0.009 14.3 7.4 1.1 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 ASD2 PF08687.11 ORF51097 - 0.012 15.2 4.4 0.014 15.0 4.4 1.1 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 PIN_12 PF16289.5 ORF51097 - 0.015 15.8 7.6 0.018 15.6 7.6 1.1 1 0 0 1 1 1 0 PIN domain Dynactin_p62 PF05502.13 ORF51097 - 0.019 13.8 2.3 0.02 13.7 2.3 1.0 1 0 0 1 1 1 0 Dynactin p62 family CALCOCO1 PF07888.11 ORF51097 - 0.024 13.5 5.2 0.025 13.5 5.2 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like TMPIT PF07851.13 ORF51097 - 0.025 13.9 5.2 0.028 13.7 5.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein End3 PF12761.7 ORF51097 - 0.057 13.6 6.1 0.064 13.4 6.1 1.1 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 SseC PF04888.12 ORF51097 - 0.075 12.6 3.7 0.094 12.3 3.7 1.1 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family UPF0242 PF06785.11 ORF51097 - 0.082 13.0 7.6 0.11 12.6 7.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Atg14 PF10186.9 ORF51097 - 0.12 11.5 5.3 0.13 11.3 5.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 USP8_interact PF08941.10 ORF51097 - 0.13 12.0 4.4 0.19 11.5 4.4 1.1 1 0 0 1 1 1 0 USP8 interacting HAUS6_N PF14661.6 ORF51097 - 0.26 10.8 5.6 0.37 10.3 5.6 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF2570 PF10828.8 ORF51097 - 1.6 8.6 10.3 2.6 7.9 10.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) Fib_alpha PF08702.10 ORF51097 - 4.3 7.5 12.2 1.1 9.5 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family YabA PF06156.13 ORF51097 - 5.3 7.7 9.0 10 6.8 9.0 1.7 1 1 0 1 1 1 0 Initiation control protein YabA Cytochrom_C PF00034.21 ORF49836 - 7.7e-07 30.2 0.3 6.2e-06 27.3 0.3 2.0 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF49836 - 2.5e-06 27.7 0.7 4.2e-05 23.8 0.7 2.1 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF49836 - 0.085 12.6 0.1 0.16 11.7 0.1 1.4 1 0 0 1 1 1 0 Cytochrome c-550 domain LepA_C PF06421.12 ORF49479 - 8.5e-27 93.4 0.5 1.2e-26 93.0 0.5 1.2 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus EFG_C PF00679.24 ORF49479 - 8.4e-17 61.0 0.0 1.2e-16 60.5 0.0 1.3 1 0 0 1 1 1 1 Elongation factor G C-terminus Ribosomal_S19 PF00203.21 ORF49284 - 9.1e-30 102.4 0.1 1.4e-29 101.8 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 DUF3781 PF12636.7 ORF48628 - 0.12 12.2 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) DUF2397 PF09660.10 ORF47118 - 0.00019 20.5 0.4 0.00021 20.3 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2397) EzrA PF06160.12 ORF47118 - 0.0013 17.0 3.3 0.0013 17.0 3.3 1.3 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA WXG100 PF06013.12 ORF47118 - 0.0059 16.8 0.2 0.011 16.0 0.2 1.4 1 0 0 1 1 1 1 Proteins of 100 residues with WXG GldM_N PF12081.8 ORF47118 - 0.042 13.9 3.5 0.058 13.5 3.5 1.3 1 0 0 1 1 1 0 GldM N-terminal domain DUF948 PF06103.11 ORF47118 - 0.051 13.8 0.5 0.12 12.6 0.5 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) CdvA PF18822.1 ORF47118 - 0.075 12.9 5.1 0.066 13.0 1.8 2.0 2 0 0 2 2 2 0 CdvA-like coiled-coil domain YlqD PF11068.8 ORF47118 - 0.078 13.3 2.1 0.1 13.0 2.1 1.3 1 0 0 1 1 1 0 YlqD protein FlxA PF14282.6 ORF47118 - 0.13 12.2 5.7 0.78 9.8 0.7 2.2 1 1 1 2 2 2 0 FlxA-like protein Laminin_II PF06009.12 ORF47118 - 0.26 11.3 3.7 0.43 10.6 2.4 1.9 1 1 1 2 2 2 0 Laminin Domain II Fzo_mitofusin PF04799.13 ORF47118 - 0.31 10.6 3.3 0.55 9.8 3.3 1.4 1 1 0 1 1 1 0 fzo-like conserved region Wbp11 PF09429.10 ORF47118 - 0.31 11.5 4.1 0.69 10.3 3.0 2.1 1 1 0 1 1 1 0 WW domain binding protein 11 FapA PF03961.13 ORF47118 - 0.32 9.6 4.3 0.39 9.3 4.3 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF1657 PF07870.11 ORF47118 - 1.5 8.7 5.4 0.51 10.3 0.2 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF1657) bZIP_1 PF00170.21 ORF47118 - 3.9 7.7 7.6 0.38 10.9 0.3 2.6 2 1 1 3 3 3 0 bZIP transcription factor DNA_pol_delta_4 PF04081.13 ORF47047 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 DUF4538 PF15061.6 ORF46032 - 0.016 14.9 3.8 0.1 12.4 0.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) Bax1-I PF01027.20 ORF46032 - 0.19 11.6 14.7 0.34 10.7 14.7 1.5 1 1 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 NAD_binding_11 PF14833.6 ORF46005 - 4.1e-21 75.5 0.1 4.7e-21 75.3 0.1 1.0 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DNA_pol_delta_4 PF04081.13 ORF45800 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 Pkinase PF00069.25 ORF4503 - 3.5e-36 124.9 3.8 3.9e-36 124.8 3.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4503 - 4e-26 91.8 0.9 4.4e-26 91.7 0.9 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF4503 - 1.1e-06 28.1 0.5 1.3e-06 28.0 0.5 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family NAD_Gly3P_dh_N PF01210.23 ORF4503 - 0.041 13.8 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RIO1 PF01163.22 ORF4503 - 0.042 13.5 0.6 0.056 13.0 0.6 1.3 1 1 0 1 1 1 0 RIO1 family Ribosomal_L7Ae PF01248.26 ORF44983 - 3.4e-23 81.2 0.8 6.2e-23 80.4 0.8 1.5 1 1 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Adeno_E3_CR1 PF02440.15 ORF44983 - 0.015 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 ATPase_2 PF01637.18 ORF44983 - 0.045 13.7 1.2 0.054 13.4 0.9 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TPR_15 PF13429.6 ORF44983 - 0.05 12.8 0.0 0.068 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF5444 PF17519.2 ORF44931 - 0.68 10.0 2.2 3.8 7.6 0.3 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5444) ADP_ribosyl_GH PF03747.14 ORF44033 - 3.3e-15 56.6 0.0 4.6e-15 56.1 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase AbiJ_NTD4 PF18863.1 ORF44033 - 0.0019 18.7 0.1 0.0024 18.4 0.1 1.1 1 0 0 1 1 1 1 AbiJ N-terminal domain 4 DUF3990 PF13151.6 ORF44033 - 0.091 12.4 0.2 0.36 10.5 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3990) DUF4600 PF15372.6 ORF44033 - 0.11 12.9 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4600) Sugar_tr PF00083.24 ORF42085 - 1.8e-24 86.4 3.6 1.8e-24 86.4 3.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF749 PF05370.11 ORF39425 - 0.037 14.1 0.6 0.037 14.1 0.6 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF749) ROK PF00480.20 ORF39236 - 4.8e-27 95.2 0.0 5.4e-27 95.0 0.0 1.0 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 ORF39236 - 0.0036 16.4 0.0 0.0046 16.0 0.0 1.1 1 0 0 1 1 1 1 Glucokinase Colipase_C PF02740.14 ORF39090 - 0.24 11.6 3.8 2 8.6 0.9 2.3 2 0 0 2 2 2 0 Colipase, C-terminal domain Ribosomal_L34 PF00468.17 ORF38468 - 0.00068 19.5 10.6 0.0041 17.1 6.7 2.3 1 1 1 2 2 2 2 Ribosomal protein L34 Pkinase PF00069.25 ORF37795 - 6.8e-08 32.2 0.0 8.3e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_C PF00433.24 ORF37795 - 0.00022 21.8 2.1 0.00049 20.8 2.1 1.7 1 0 0 1 1 1 1 Protein kinase C terminal domain cNMP_binding PF00027.29 ORF3678 - 0.0003 20.8 0.0 0.00051 20.0 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain RQC PF09382.10 ORF3678 - 0.083 12.7 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 RQC domain NIF PF03031.18 ORF35958 - 2.1e-26 92.6 0.1 3.1e-26 92.0 0.1 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Hydrolase PF00702.26 ORF35958 - 0.071 13.4 0.3 11 6.3 0.4 2.1 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase Peptidase_M50 PF02163.22 ORF35573 - 0.97 8.6 8.0 0.82 8.9 7.0 1.4 1 1 0 1 1 1 0 Peptidase family M50 CBM77 PF18283.1 ORF35573 - 8.6 6.8 10.3 1.5 9.2 5.7 1.9 2 0 0 2 2 2 0 Carbohydrate binding module 77 HEPN_MAE_28990 PF18737.1 ORF35222 - 0.097 12.6 4.1 0.11 12.4 4.1 1.0 1 0 0 1 1 1 0 MAE_28990/MAE_18760-like HEPN DNA_pol_delta_4 PF04081.13 ORF3482 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 Ribosomal_L34 PF00468.17 ORF3457 - 0.00068 19.5 10.6 0.0041 17.1 6.7 2.3 1 1 1 2 2 2 2 Ribosomal protein L34 TEX12 PF15219.6 ORF3370 - 0.018 15.4 0.0 0.04 14.2 0.0 1.6 2 0 0 2 2 2 0 Testis-expressed 12 WHEP-TRS PF00458.20 ORF33245 - 0.016 15.3 0.9 0.032 14.4 0.9 1.4 1 0 0 1 1 1 0 WHEP-TRS domain MAP7 PF05672.11 ORF33245 - 0.065 12.9 11.9 0.093 12.4 11.9 1.1 1 0 0 1 1 1 0 MAP7 (E-MAP-115) family Iron_permease PF04120.12 ORF33245 - 0.1 12.4 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Low affinity iron permease Presenilin PF01080.17 ORF33245 - 0.28 9.9 0.2 0.3 9.8 0.2 1.0 1 0 0 1 1 1 0 Presenilin Vfa1 PF08432.10 ORF33245 - 1.4 9.3 7.2 1.9 8.8 7.2 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Sex_peptide PF08138.11 ORF33079 - 0.32 11.2 0.2 0.32 11.2 0.2 2.6 3 1 0 3 3 3 0 Sex peptide (SP) family bZIP_1 PF00170.21 ORF31644 - 1.4e-06 28.3 16.5 4.9e-06 26.5 16.1 2.1 1 1 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF31644 - 0.00016 21.6 7.2 0.00016 21.6 7.2 2.4 3 0 0 3 3 3 1 Basic region leucine zipper HR1 PF02185.16 ORF31644 - 0.0017 18.5 1.3 0.97 9.6 4.6 2.4 2 0 0 2 2 2 1 Hr1 repeat Pox_A_type_inc PF04508.12 ORF31644 - 0.0036 17.1 0.8 0.01 15.7 0.8 1.9 1 0 0 1 1 1 1 Viral A-type inclusion protein repeat Cortex-I_coil PF09304.10 ORF31644 - 0.011 16.0 3.6 0.019 15.2 3.6 1.4 1 0 0 1 1 1 0 Cortexillin I, coiled coil HOOK PF05622.12 ORF31644 - 0.02 13.0 4.6 0.021 13.0 4.6 1.1 1 0 0 1 1 1 0 HOOK protein Ead_Ea22 PF13935.6 ORF31644 - 0.021 15.5 0.1 0.031 15.0 0.1 1.4 1 0 0 1 1 1 0 Ead/Ea22-like protein Seryl_tRNA_N PF02403.22 ORF31644 - 0.022 15.0 4.9 1.6 9.0 5.3 2.4 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Med7 PF05983.11 ORF31644 - 0.028 14.5 1.2 0.055 13.6 1.2 1.5 1 0 0 1 1 1 0 MED7 protein Uds1 PF15456.6 ORF31644 - 0.034 14.3 2.8 0.034 14.3 2.8 1.6 1 1 0 1 1 1 0 Up-regulated During Septation PLAC9 PF15205.6 ORF31644 - 0.04 14.3 0.1 0.073 13.5 0.1 1.4 1 0 0 1 1 1 0 Placenta-specific protein 9 Swi5 PF07061.11 ORF31644 - 0.046 13.8 1.1 0.087 12.9 1.1 1.5 1 0 0 1 1 1 0 Swi5 PHM7_cyt PF14703.6 ORF31644 - 0.061 13.6 4.3 0.093 13.0 4.3 1.4 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter DUF3347 PF11827.8 ORF31644 - 0.17 12.1 3.1 0.19 11.9 3.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3347) Med4 PF10018.9 ORF31644 - 0.21 11.3 5.2 0.22 11.2 4.6 1.3 1 1 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Atg14 PF10186.9 ORF31644 - 0.23 10.5 6.0 0.27 10.3 6.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 bZIP_Maf PF03131.17 ORF31644 - 0.23 12.0 8.7 0.47 11.0 8.7 1.6 1 1 0 1 1 1 0 bZIP Maf transcription factor DUF5320 PF17253.2 ORF31644 - 0.27 12.3 2.8 0.54 11.4 2.5 1.6 2 0 0 2 2 1 0 Family of unknown function (DUF5320) FlaC_arch PF05377.11 ORF31644 - 0.33 11.4 3.2 3.1 8.3 2.9 2.3 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) FlxA PF14282.6 ORF31644 - 0.79 9.7 8.5 0.089 12.8 2.7 2.3 2 1 1 3 3 3 0 FlxA-like protein DUF3138 PF11336.8 ORF31115 - 0.33 9.5 3.1 0.36 9.4 3.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) CCDC53 PF10152.9 ORF31115 - 0.86 10.0 4.3 1 9.8 4.3 1.2 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex MauE PF07291.11 ORF30526 - 0.11 12.3 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Methylamine utilisation protein MauE Kinesin PF00225.23 ORF30420 - 2.6e-45 154.8 0.3 2.9e-45 154.7 0.3 1.0 1 0 0 1 1 1 1 Kinesin motor domain PP2C PF00481.21 ORF29358 - 9.3e-38 130.3 0.1 1.2e-37 130.0 0.1 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C DUF4298 PF14131.6 ORF29358 - 0.05 13.6 0.1 0.1 12.6 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4298) DUF3220 PF11516.8 ORF29297 - 0.11 12.7 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) SHIPPO-rpt PF07004.12 ORF28056 - 1.3 10.1 12.0 3.5 8.7 0.4 3.5 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat Ribosomal_S19 PF00203.21 ORF26914 - 9.1e-30 102.4 0.1 1.4e-29 101.8 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Antimicrobial10 PF08105.11 ORF26556 - 1.3 9.1 5.9 2.8 8.1 5.9 1.6 1 0 0 1 1 1 0 Metchnikowin family DNA_pol_delta_4 PF04081.13 ORF26323 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 Peptidase_A21 PF03566.13 ORF2479 - 0.0029 15.9 0.1 0.0032 15.8 0.1 1.0 1 0 0 1 1 1 1 Peptidase family A21 HEAT PF02985.22 ORF24669 - 0.00013 21.9 0.0 0.95 9.9 0.0 3.5 2 1 0 3 3 3 1 HEAT repeat HEAT_2 PF13646.6 ORF24669 - 0.00086 19.7 0.0 0.12 12.8 0.0 2.2 1 1 1 2 2 2 2 HEAT repeats Cnd1 PF12717.7 ORF24669 - 0.004 17.2 0.4 0.032 14.3 0.2 1.9 1 1 1 2 2 2 1 non-SMC mitotic condensation complex subunit 1 MOR2-PAG1_N PF14222.6 ORF24669 - 0.0086 15.1 0.3 0.01 14.8 0.3 1.2 1 1 0 1 1 1 1 Cell morphogenesis N-terminal ParcG PF10274.9 ORF24669 - 0.085 13.0 0.7 0.28 11.3 0.7 1.8 1 1 0 1 1 1 0 Parkin co-regulated protein DHQ_synthase PF01761.20 ORF22344 - 0.1 11.7 1.2 0.17 11.0 1.2 1.3 1 0 0 1 1 1 0 3-dehydroquinate synthase GlcNAc-1_reg PF18440.1 ORF22344 - 0.13 12.5 2.3 0.15 12.3 1.4 1.6 1 1 0 1 1 1 0 Putative GlcNAc-1 phosphotransferase regulatory domain Ribosomal_L7Ae PF01248.26 ORF21339 - 3.4e-23 81.2 0.8 6.2e-23 80.4 0.8 1.5 1 1 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Adeno_E3_CR1 PF02440.15 ORF21339 - 0.015 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 ATPase_2 PF01637.18 ORF21339 - 0.045 13.7 1.2 0.054 13.4 0.9 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TPR_15 PF13429.6 ORF21339 - 0.05 12.8 0.0 0.068 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF1068 PF06364.12 ORF20750 - 0.018 14.9 0.0 0.025 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) Sybindin PF04099.12 ORF20742 - 0.045 13.7 0.2 0.051 13.5 0.2 1.2 1 0 0 1 1 1 0 Sybindin-like family ECH_1 PF00378.20 ORF18770 - 5.1e-12 45.6 0.0 6.1e-12 45.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF18770 - 0.0025 17.4 0.0 0.003 17.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Carboxyl_trans PF01039.22 ORF18770 - 0.013 14.1 0.0 0.014 14.0 0.0 1.1 1 0 0 1 1 1 0 Carboxyl transferase domain DNA_pol_delta_4 PF04081.13 ORF18529 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 Pkinase PF00069.25 ORF18304 - 2.1e-34 119.1 0.0 2.5e-34 118.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18304 - 5.1e-22 78.4 0.0 5.4e-22 78.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF18304 - 4.3e-10 39.4 0.0 5.7e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF18304 - 0.00018 20.4 0.0 0.00021 20.2 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF18304 - 0.0088 15.4 0.1 0.01 15.2 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF18304 - 0.015 14.3 0.0 0.018 14.0 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain HEAT PF02985.22 ORF16978 - 0.00013 21.9 0.0 0.95 9.9 0.0 3.5 2 1 0 3 3 3 1 HEAT repeat HEAT_2 PF13646.6 ORF16978 - 0.00086 19.7 0.0 0.12 12.8 0.0 2.2 1 1 1 2 2 2 2 HEAT repeats Cnd1 PF12717.7 ORF16978 - 0.004 17.2 0.4 0.032 14.3 0.2 1.9 1 1 1 2 2 2 1 non-SMC mitotic condensation complex subunit 1 MOR2-PAG1_N PF14222.6 ORF16978 - 0.0086 15.1 0.3 0.01 14.8 0.3 1.2 1 1 0 1 1 1 1 Cell morphogenesis N-terminal ParcG PF10274.9 ORF16978 - 0.085 13.0 0.7 0.28 11.3 0.7 1.8 1 1 0 1 1 1 0 Parkin co-regulated protein EF-hand_7 PF13499.6 ORF16589 - 3.3e-10 40.2 1.8 9.8e-09 35.5 0.9 2.3 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF16589 - 5.8e-09 34.9 3.5 2e-06 27.0 0.6 3.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF16589 - 9.4e-07 28.3 0.6 0.0011 18.8 0.1 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF16589 - 7.8e-05 22.5 5.3 0.00012 21.8 0.3 2.9 4 0 0 4 4 4 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF16589 - 0.0031 17.8 1.5 0.0043 17.4 1.5 1.3 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_5 PF13202.6 ORF16589 - 0.0031 16.9 2.5 0.0042 16.5 0.3 2.4 2 0 0 2 2 2 1 EF hand GlnD_UR_UTase PF08335.11 ORF16589 - 0.056 13.6 0.1 2.4 8.3 0.0 2.2 1 1 1 2 2 2 0 GlnD PII-uridylyltransferase pP_pnuc_1 PF18165.1 ORF16589 - 0.068 13.1 0.5 0.14 12.0 0.2 1.7 1 1 0 1 1 1 0 Predicted pPIWI-associating nuclease Mito_carr PF00153.27 ORF14855 - 3.7e-24 84.5 2.1 6.1e-13 48.5 1.3 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein WASH-7_C PF14746.6 ORF1356 - 0.0064 16.2 0.2 0.01 15.6 0.2 1.5 1 0 0 1 1 1 1 WASH complex subunit 7, C-terminal YyzF PF14116.6 ORF1356 - 0.032 14.3 0.0 0.13 12.3 0.0 2.1 1 0 0 1 1 1 0 YyzF-like protein HYR PF02494.16 ORF12180 - 0.00022 21.5 1.6 0.00032 20.9 1.0 1.6 1 1 0 1 1 1 1 HYR domain AAA_lid_3 PF17862.1 ORF1134 - 0.0015 18.3 0.4 0.0029 17.4 0.4 1.4 1 0 0 1 1 1 1 AAA+ lid domain Hat1_N PF10394.9 ORF11220 - 0.0034 17.7 0.5 0.006 16.8 0.1 1.6 1 1 1 2 2 2 1 Histone acetyl transferase HAT1 N-terminus WD40_alt PF14077.6 ORF11220 - 0.078 12.9 1.1 0.11 12.4 0.3 1.7 2 0 0 2 2 2 0 Alternative WD40 repeat motif Ribosomal_L7Ae PF01248.26 ORF111784 - 3.4e-23 81.2 0.8 6.2e-23 80.4 0.8 1.5 1 1 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Adeno_E3_CR1 PF02440.15 ORF111784 - 0.015 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 ATPase_2 PF01637.18 ORF111784 - 0.045 13.7 1.2 0.054 13.4 0.9 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TPR_15 PF13429.6 ORF111784 - 0.05 12.8 0.0 0.068 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat CutC PF03932.14 ORF109784 - 4.1e-35 121.1 0.1 4.9e-35 120.8 0.1 1.1 1 0 0 1 1 1 1 CutC family TPP_enzyme_M PF00205.22 ORF109784 - 0.092 12.5 0.1 0.13 12.0 0.1 1.4 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain zf-C3HC4_3 PF13920.6 ORF109702 - 7.2e-08 32.2 13.0 1.1e-07 31.5 13.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF109702 - 3.6e-06 26.7 17.5 6.7e-06 25.9 17.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF109702 - 6.4e-06 26.4 16.1 1.5e-05 25.3 16.1 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF109702 - 4.1e-05 23.4 13.5 0.00055 19.7 13.4 2.4 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF109702 - 0.0015 18.4 14.8 0.0029 17.5 14.8 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF109702 - 0.002 18.1 15.6 0.045 13.8 9.5 2.7 3 0 0 3 3 3 2 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF109702 - 0.0027 17.8 8.8 0.0027 17.8 8.8 2.4 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_6 PF14835.6 ORF109702 - 0.0052 16.6 4.8 0.0087 15.9 4.8 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein DUF1360 PF07098.11 ORF109702 - 0.029 14.3 0.2 0.051 13.5 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1360) Cript PF10235.9 ORF109702 - 0.059 13.9 4.3 0.11 13.1 4.3 1.4 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT Tat PF00539.18 ORF109702 - 0.54 10.5 6.0 0.99 9.6 6.0 1.4 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) Ribosomal_L7Ae PF01248.26 ORF108744 - 3.4e-23 81.2 0.8 6.2e-23 80.4 0.8 1.5 1 1 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Adeno_E3_CR1 PF02440.15 ORF108744 - 0.015 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 ATPase_2 PF01637.18 ORF108744 - 0.045 13.7 1.2 0.054 13.4 0.9 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TPR_15 PF13429.6 ORF108744 - 0.05 12.8 0.0 0.068 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Seryl_tRNA_N PF02403.22 ORF106690 - 0.0052 17.0 4.6 0.009 16.2 4.6 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Atg14 PF10186.9 ORF106690 - 0.0065 15.6 3.1 0.0067 15.6 3.1 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4200 PF13863.6 ORF106690 - 0.0084 16.5 7.3 0.014 15.7 7.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) TolA_bind_tri PF16331.5 ORF106690 - 0.018 15.1 6.6 0.029 14.4 6.6 1.4 1 0 0 1 1 1 0 TolA binding protein trimerisation Fib_alpha PF08702.10 ORF106690 - 0.062 13.5 8.7 0.095 12.9 8.7 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4004 PF13171.6 ORF106690 - 0.065 13.5 3.7 0.089 13.0 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4004) DUF1664 PF07889.12 ORF106690 - 0.072 13.1 3.8 0.14 12.2 3.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Tli4_N PF18443.1 ORF106690 - 0.079 13.3 2.4 0.096 13.0 2.4 1.2 1 0 0 1 1 1 0 Tle cognate immunity protein 4 N-terminal domain DUF641 PF04859.12 ORF106690 - 0.12 12.7 4.4 0.19 12.1 4.4 1.3 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) TMPIT PF07851.13 ORF106690 - 0.15 11.3 6.0 0.19 11.0 6.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein Snapin_Pallidin PF14712.6 ORF106690 - 0.21 12.0 7.8 0.35 11.3 7.8 1.4 1 0 0 1 1 1 0 Snapin/Pallidin DUF3450 PF11932.8 ORF106690 - 0.24 10.7 6.5 0.3 10.4 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 ORF106690 - 0.25 10.9 3.0 0.25 10.9 3.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit UCH PF00443.29 ORF106690 - 0.25 10.8 4.2 0.35 10.3 4.2 1.3 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase CDC27 PF09507.10 ORF105934 - 0.063 12.7 30.9 0.069 12.5 30.9 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 CDC45 PF02724.14 ORF105934 - 1.6 6.9 24.6 1.9 6.7 24.6 1.1 1 0 0 1 1 1 0 CDC45-like protein PBP1_TM PF14812.6 ORF105934 - 2.1 8.8 33.4 1.5 9.3 17.3 2.3 1 1 1 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal LAP1C PF05609.12 ORF105934 - 4.2 6.3 15.9 4.5 6.3 15.9 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) TFIIF_alpha PF05793.12 ORF105934 - 4.6 5.7 32.7 5.6 5.4 32.7 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) PTPRCAP PF15713.5 ORF105934 - 9 6.6 22.8 12 6.2 22.8 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Myb_DNA-binding PF00249.31 ORF104390 - 1.6e-06 28.2 0.0 3.6e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF104390 - 0.00036 20.7 0.7 0.00092 19.4 0.7 1.9 1 1 1 2 2 2 1 Myb-like DNA-binding domain Aldedh PF00171.22 ORF103054 - 0.093 11.2 0.0 0.1 11.1 0.0 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family NAD_binding_11 PF14833.6 ORF102725 - 4.1e-21 75.5 0.1 4.7e-21 75.3 0.1 1.0 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase eIF-5_eIF-2B PF01873.17 ORF10172 - 0.057 13.3 0.1 0.16 11.9 0.0 1.7 1 1 1 2 2 2 0 Domain found in IF2B/IF5 DUF3045 PF11243.8 ORF10172 - 0.093 12.9 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3045) PPP4R2 PF09184.11 ORF101184 - 0.017 14.7 19.4 0.022 14.4 19.4 1.0 1 0 0 1 1 1 0 PPP4R2 CDC27 PF09507.10 ORF101184 - 0.029 13.8 19.0 0.034 13.5 19.0 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Nop14 PF04147.12 ORF101184 - 0.071 11.3 18.8 0.082 11.1 18.8 1.1 1 0 0 1 1 1 0 Nop14-like family Astro_capsid_p PF12226.8 ORF101184 - 3.7 6.6 15.2 4.3 6.4 15.2 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Paf1 PF03985.13 ORF101184 - 6 5.7 16.8 8.7 5.2 16.8 1.3 1 0 0 1 1 1 0 Paf1 cNMP_binding PF00027.29 ORF100607 - 0.061 13.4 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Thg1C PF14413.6 ORF100607 - 0.066 13.4 1.1 0.56 10.4 1.1 2.0 1 1 0 1 1 1 0 Thg1 C terminal domain p450 PF00067.22 ORF100458 - 1.6e-27 96.4 0.0 1.8e-27 96.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Borrelia_P13 PF05628.12 ORF10030 - 0.075 13.0 0.0 0.092 12.7 0.0 1.1 1 0 0 1 1 1 0 Borrelia membrane protein P13 DUF1841 PF08897.11 ORF100200 - 0.035 14.1 0.1 0.059 13.4 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1841) Ion_trans PF00520.31 ORF100165 - 4.5e-07 29.4 11.5 4.5e-07 29.4 11.5 1.9 2 0 0 2 2 2 1 Ion transport protein PKD_channel PF08016.12 ORF100165 - 0.0001 21.2 11.3 0.00015 20.6 11.3 1.2 1 0 0 1 1 1 1 Polycystin cation channel HILPDA PF15220.6 ORF100063 - 3.5 7.8 6.0 0.29 11.3 0.9 1.9 2 0 0 2 2 2 0 Hypoxia-inducible lipid droplet-associated TBD PF12845.7 NODE_45354_length_433_cov_2.419598_g37583_i0reverse_frame_1 - 0.081 12.8 0.3 0.19 11.6 0.3 1.6 1 0 0 1 1 1 0 TBD domain DUF4619 PF15398.6 NODE_45349_length_433_cov_2.773869_g37578_i0reverse_frame_1 - 2.4 7.6 11.5 2.6 7.5 11.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4619) GREB1 PF15782.5 NODE_45346_length_433_cov_2.932161_g37575_i0forward_frame_1 - 0.11 9.6 0.2 0.12 9.5 0.2 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer GvpL_GvpF PF06386.11 NODE_45325_length_433_cov_85.336683_g37554_i0reverse_frame_1 - 0.32 10.9 2.3 0.42 10.5 2.3 1.1 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF zf-RRN7 PF11781.8 NODE_45323_length_433_cov_85.834171_g37552_i0forward_frame_1 - 0.11 12.3 1.6 0.12 12.1 0.1 1.8 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 CHIPS PF11434.8 NODE_45321_length_433_cov_91.615578_g36850_i1reverse_frame_1 - 0.095 12.5 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS PTPLA PF04387.14 NODE_45321_length_433_cov_91.615578_g36850_i1forward_frame_1 - 0.05 13.3 1.0 0.07 12.9 1.0 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA HSNSD PF12062.8 NODE_45316_length_433_cov_107.708543_g37546_i0reverse_frame_1 - 0.013 14.3 0.7 0.016 14.0 0.7 1.1 1 0 0 1 1 1 0 heparan sulfate-N-deacetylase Arch_flagellin PF01917.16 NODE_45311_length_433_cov_143.130653_g37541_i0forward_frame_1 - 0.0032 17.7 1.4 0.0051 17.0 1.4 1.3 1 0 0 1 1 1 1 Archaebacterial flagellin Cnd1 PF12717.7 NODE_45293_length_434_cov_1.501253_g37524_i0forward_frame_1 - 0.001 19.1 0.6 0.0015 18.6 0.6 1.3 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 UNC45-central PF11701.8 NODE_45293_length_434_cov_1.501253_g37524_i0forward_frame_1 - 0.023 14.7 0.1 0.027 14.4 0.1 1.1 1 0 0 1 1 1 0 Myosin-binding striated muscle assembly central Metalloenzyme PF01676.18 NODE_45293_length_434_cov_1.501253_g37524_i0forward_frame_1 - 0.13 11.6 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Metalloenzyme superfamily DUF3304 PF11745.8 NODE_45290_length_434_cov_2.278195_g37521_i0forward_frame_1 - 0.12 12.7 0.1 0.21 12.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3304) UbiA PF01040.18 NODE_45287_length_434_cov_2.852130_g37518_i0forward_frame_1 - 0.078 12.3 0.4 0.11 11.8 0.4 1.2 1 0 0 1 1 1 0 UbiA prenyltransferase family DUF4351 PF14261.6 NODE_45278_length_434_cov_30.508772_g37509_i0reverse_frame_1 - 0.14 12.2 0.1 0.26 11.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4351) DUF1002 PF06207.11 NODE_45275_length_434_cov_36.804511_g5984_i2forward_frame_1 - 0.29 10.6 10.4 0.14 11.6 8.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1002) CRAL_TRIO PF00650.20 NODE_45268_length_434_cov_75.027569_g37500_i0reverse_frame_1 - 0.00055 19.7 0.1 0.0011 18.7 0.1 1.6 1 1 0 1 1 1 1 CRAL/TRIO domain Ku_C PF03730.14 NODE_45259_length_434_cov_89.067669_g37491_i0forward_frame_1 - 0.021 15.5 0.1 0.026 15.2 0.1 1.1 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm RCC1_2 PF13540.6 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_1 - 1.6e-05 24.6 6.7 0.26 11.1 0.1 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_1 - 0.0081 16.3 0.4 14 5.7 0.0 3.0 2 1 1 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Lipocalin_7 PF14651.6 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_1 - 0.081 12.9 2.3 9.3 6.2 0.1 2.4 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family Methyltransf_29 PF03141.16 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_1 - 0.11 11.1 0.2 2 6.9 0.0 2.5 1 1 1 3 3 3 0 Putative S-adenosyl-L-methionine-dependent methyltransferase MyTH4 PF00784.17 NODE_45252_length_434_cov_135.709273_g37484_i0forward_frame_1 - 0.019 15.4 2.0 1.8 9.1 0.3 2.3 1 1 1 2 2 2 0 MyTH4 domain HTH_50 PF18024.1 NODE_45252_length_434_cov_135.709273_g37484_i0forward_frame_1 - 0.049 13.3 0.1 10 5.8 0.0 2.9 4 0 0 4 4 4 0 Helix-turn-helix domain TB2_DP1_HVA22 PF03134.19 NODE_45248_length_434_cov_155.090226_g37480_i0forward_frame_1 - 0.3 11.1 5.4 0.93 9.5 0.1 2.3 1 1 0 2 2 2 0 TB2/DP1, HVA22 family Spec3 PF15795.5 NODE_45240_length_434_cov_601.907268_g37473_i0reverse_frame_1 - 2.3e-13 50.5 2.6 8.7e-06 26.2 0.5 2.3 2 0 0 2 2 2 2 Ectodermal ciliogenesis protein CDH PF02611.15 NODE_45239_length_434_cov_1678.989975_g37472_i0reverse_frame_1 - 0.12 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 CDP-diacylglycerol pyrophosphatase RhoGEF67_u2 PF16614.5 NODE_45239_length_434_cov_1678.989975_g37472_i0forward_frame_1 - 0.27 11.3 1.6 0.33 11.0 0.5 1.7 1 1 0 1 1 1 0 Unstructured region two on RhoGEF 6 and 7 SLATT_5 PF18160.1 NODE_45231_length_434_cov_22672.002506_g37464_i0forward_frame_1 - 3.1 7.1 11.0 1.9 7.8 6.2 2.0 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 PARP PF00644.20 NODE_45228_length_435_cov_1.812500_g37461_i0reverse_frame_1 - 1.8e-10 40.7 1.9 2.9e-09 36.8 1.9 2.0 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DNA_pol_alpha_N PF12254.8 NODE_45228_length_435_cov_1.812500_g37461_i0reverse_frame_1 - 0.017 15.2 0.6 0.028 14.5 0.6 1.3 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal PSI PF01437.25 NODE_45222_length_435_cov_2.332500_g37455_i0forward_frame_1 - 2.9 8.5 16.7 0.6 10.7 11.3 2.4 2 0 0 2 2 2 0 Plexin repeat FMN_red PF03358.15 NODE_45219_length_435_cov_2.717500_g37452_i0reverse_frame_1 - 0.12 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 NADPH-dependent FMN reductase DHHC PF01529.20 NODE_45202_length_435_cov_63.657500_g37435_i0forward_frame_1 - 0.12 12.4 1.2 0.18 11.9 1.2 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase YfcL PF08891.11 NODE_45200_length_435_cov_65.387500_g37433_i0forward_frame_1 - 0.067 13.5 0.9 0.24 11.8 0.0 2.1 2 1 1 3 3 3 0 YfcL protein eIF3_subunit PF08597.10 NODE_45198_length_435_cov_68.602500_g37431_i0reverse_frame_1 - 0.053 13.4 6.8 0.077 12.9 6.8 1.2 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit OHCU_decarbox PF09349.10 NODE_45183_length_435_cov_117.132500_g37416_i0reverse_frame_1 - 0.00058 20.4 0.8 0.00068 20.1 0.8 1.1 1 0 0 1 1 1 1 OHCU decarboxylase DUF4363 PF14276.6 NODE_45183_length_435_cov_117.132500_g37416_i0reverse_frame_1 - 0.076 13.1 0.2 0.16 12.1 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4363) Aminotran_4 PF01063.19 NODE_45178_length_435_cov_158.395000_g37411_i0forward_frame_1 - 9.8e-15 55.0 0.0 1.3e-14 54.6 0.0 1.2 1 0 0 1 1 1 1 Amino-transferase class IV Acetyltransf_CG PF14542.6 NODE_45178_length_435_cov_158.395000_g37411_i0forward_frame_1 - 0.13 12.4 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DUF167 PF02594.16 NODE_45166_length_435_cov_802.220000_g37399_i0reverse_frame_1 - 2.9e-09 36.9 0.2 4.9e-09 36.2 0.2 1.3 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Spo7_2_N PF15407.6 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_1 - 0.19 11.4 0.7 19 5.0 0.0 2.3 2 0 0 2 2 2 0 Sporulation protein family 7 GHMP_kinases_N PF00288.26 NODE_45153_length_436_cov_1.493766_g37387_i0forward_frame_3 - 6.2e-11 42.4 0.1 8.7e-11 41.9 0.1 1.2 1 0 0 1 1 1 1 GHMP kinases N terminal domain Get5_C PF18514.1 NODE_45153_length_436_cov_1.493766_g37387_i0forward_frame_3 - 0.073 12.8 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Get5 C-terminal domain DUF1700 PF08006.11 NODE_45152_length_436_cov_1.633416_g37386_i0forward_frame_2 - 0.05 13.1 0.8 0.058 12.9 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Isochorismatase PF00857.20 NODE_45148_length_436_cov_2.301746_g37382_i0reverse_frame_2 - 2.5e-16 60.4 0.0 3e-16 60.1 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family RTP1_C2 PF10304.9 NODE_45147_length_436_cov_2.356608_g37381_i0reverse_frame_3 - 0.17 11.6 0.0 0.17 11.6 0.0 1.7 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 2 DUF4083 PF13314.6 NODE_45145_length_436_cov_2.610973_g37379_i0forward_frame_3 - 0.14 12.1 2.6 0.3 11.1 2.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4083) Bac_surface_Ag PF01103.23 NODE_45139_length_436_cov_3.431421_g37373_i0forward_frame_2 - 1.4e-13 51.0 3.2 1.5e-13 51.0 1.4 1.7 2 0 0 2 2 2 1 Surface antigen POTRA PF07244.15 NODE_45139_length_436_cov_3.431421_g37373_i0forward_frame_2 - 2.6e-05 24.7 0.0 6.2e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Surface antigen variable number repeat PorP_SprF PF11751.8 NODE_45139_length_436_cov_3.431421_g37373_i0forward_frame_2 - 0.004 16.7 0.1 0.0059 16.2 0.1 1.2 1 0 0 1 1 1 1 Type IX secretion system membrane protein PorP/SprF KapB PF08810.10 NODE_45133_length_436_cov_5.985037_g37367_i0reverse_frame_3 - 0.048 13.8 0.4 0.11 12.6 0.1 1.8 2 0 0 2 2 2 0 Kinase associated protein B Pkinase_C PF00433.24 NODE_45124_length_436_cov_67.835411_g37358_i0forward_frame_2 - 2.6e-06 28.0 1.9 5.3e-06 27.0 1.9 1.5 1 0 0 1 1 1 1 Protein kinase C terminal domain Pkinase PF00069.25 NODE_45124_length_436_cov_67.835411_g37358_i0forward_frame_2 - 0.047 13.1 0.0 0.076 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein kinase domain DUF2378 PF09536.10 NODE_45123_length_436_cov_68.708229_g37357_i0forward_frame_2 - 0.016 15.1 0.1 0.02 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2378) DUF1604 PF07713.13 NODE_45118_length_436_cov_75.690773_g37352_i0forward_frame_2 - 0.12 12.2 1.1 0.24 11.2 1.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) NINJA_B PF16136.5 NODE_45099_length_436_cov_151.605985_g37333_i0reverse_frame_3 - 0.86 10.0 6.3 1.2 9.6 6.3 1.3 1 0 0 1 1 1 0 Putative nuclear localisation signal KH_6 PF15985.5 NODE_45096_length_436_cov_197.950125_g37330_i0reverse_frame_3 - 0.13 12.7 1.2 15 6.0 0.0 2.8 3 0 0 3 3 3 0 KH domain 5_nucleotid_C PF02872.18 NODE_45096_length_436_cov_197.950125_g37330_i0reverse_frame_3 - 0.17 12.1 0.0 1.4 9.1 0.0 1.9 1 1 1 2 2 2 0 5'-nucleotidase, C-terminal domain Neur_chan_memb PF02932.16 NODE_45096_length_436_cov_197.950125_g37330_i0reverse_frame_2 - 1.6 8.8 6.9 2 8.4 6.9 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region RCC1_2 PF13540.6 NODE_45096_length_436_cov_197.950125_g37330_i0forward_frame_3 - 3.2e-05 23.6 3.4 0.1 12.4 0.0 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Glyco_hydro_88 PF07470.13 NODE_45096_length_436_cov_197.950125_g37330_i0forward_frame_3 - 0.0051 15.9 0.0 2.6 7.0 0.0 2.2 2 0 0 2 2 2 2 Glycosyl Hydrolase Family 88 tRNA-synt_1e PF01406.19 NODE_45096_length_436_cov_197.950125_g37330_i0forward_frame_3 - 0.11 11.9 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain DUF2664 PF10867.8 NODE_45096_length_436_cov_197.950125_g37330_i0forward_frame_3 - 0.28 11.7 4.1 29 5.2 0.0 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF2664) MOZART1 PF12554.8 NODE_45087_length_436_cov_1005.309227_g37323_i0forward_frame_2 - 6.8e-20 70.6 0.2 1e-19 70.0 0.2 1.3 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated Atg8 PF02991.16 NODE_45086_length_436_cov_1076.112219_g37322_i0reverse_frame_3 - 8.7e-07 29.1 0.5 1.4e-06 28.5 0.5 1.5 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like AMP-binding PF00501.28 NODE_45077_length_437_cov_2.027363_g37315_i0reverse_frame_3 - 1e-27 96.9 0.1 1.1e-27 96.7 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme Dyp_perox PF04261.12 NODE_45075_length_437_cov_2.440299_g37313_i0forward_frame_3 - 0.0022 17.0 0.0 0.0041 16.1 0.0 1.5 1 0 0 1 1 1 1 Dyp-type peroxidase family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks154.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks154.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks154.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks154.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YkuI_C PF10388.9 NODE_45070_length_437_cov_2.853234_g37308_i0reverse_frame_3 - 0.093 12.5 1.7 0.21 11.4 1.0 1.8 1 1 1 2 2 2 0 EAL-domain associated signalling protein domain AI-2E_transport PF01594.16 NODE_45070_length_437_cov_2.853234_g37308_i0reverse_frame_3 - 0.29 10.3 0.5 0.35 10.0 0.5 1.1 1 0 0 1 1 1 0 AI-2E family transporter PepSY_2 PF13670.6 NODE_45070_length_437_cov_2.853234_g37308_i0reverse_frame_2 - 0.13 12.3 0.2 0.13 12.3 0.2 1.9 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain SPT16 PF08644.11 NODE_45068_length_437_cov_2.890547_g37306_i0reverse_frame_3 - 0.055 13.6 1.2 0.069 13.3 1.2 1.2 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) DUF287 PF03384.14 NODE_45066_length_437_cov_2.970149_g37304_i0reverse_frame_3 - 0.01 16.2 1.2 0.017 15.5 1.2 1.3 1 0 0 1 1 1 0 Drosophila protein of unknown function, DUF287 DUF3164 PF11363.8 NODE_45066_length_437_cov_2.970149_g37304_i0reverse_frame_2 - 0.12 12.0 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3164) Polysacc_deac_1 PF01522.21 NODE_45066_length_437_cov_2.970149_g37304_i0forward_frame_2 - 5.4e-14 52.2 0.0 8.1e-14 51.6 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase NUDIX PF00293.28 NODE_45065_length_437_cov_3.062189_g37303_i0forward_frame_2 - 3.8e-08 33.4 0.2 5.2e-08 33.0 0.2 1.2 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 NODE_45065_length_437_cov_3.062189_g37303_i0forward_frame_2 - 0.019 15.0 0.3 0.025 14.6 0.3 1.2 1 0 0 1 1 1 0 NUDIX domain CSS-motif PF12792.7 NODE_45064_length_437_cov_3.196517_g37302_i0reverse_frame_3 - 8.4e-28 97.3 0.0 9.4e-28 97.1 0.0 1.0 1 0 0 1 1 1 1 CSS motif domain associated with EAL SpoVR PF04293.13 NODE_45063_length_437_cov_3.231343_g37301_i0reverse_frame_3 - 6.5e-58 196.4 1.0 7e-58 196.3 1.0 1.0 1 0 0 1 1 1 1 SpoVR like protein Peptidase_M1 PF01433.20 NODE_45063_length_437_cov_3.231343_g37301_i0reverse_frame_3 - 0.0068 16.0 0.1 0.011 15.3 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain MCRS_N PF13325.6 NODE_45063_length_437_cov_3.231343_g37301_i0reverse_frame_3 - 0.11 12.5 0.4 0.13 12.2 0.4 1.1 1 0 0 1 1 1 0 N-terminal region of micro-spherule protein SopA PF13981.6 NODE_45060_length_437_cov_3.480100_g37298_i0forward_frame_3 - 0.11 12.9 0.1 0.2 12.1 0.1 1.4 1 0 0 1 1 1 0 SopA-like central domain Doppel PF11466.8 NODE_45059_length_437_cov_5.276119_g37297_i0forward_frame_2 - 0.11 12.1 0.0 0.11 12.1 0.0 2.5 3 0 0 3 3 3 0 Prion-like protein Doppel Rbsn PF11464.8 NODE_45052_length_437_cov_73.500000_g37290_i0reverse_frame_2 - 0.044 13.5 0.3 0.1 12.3 0.3 1.6 1 0 0 1 1 1 0 Rabenosyn Rab binding domain Cas_Csn2 PF09711.10 NODE_45048_length_437_cov_76.442786_g37286_i0reverse_frame_2 - 0.016 14.9 3.2 0.019 14.6 3.2 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csn2) PAP_assoc PF03828.19 NODE_45047_length_437_cov_78.119403_g37285_i0forward_frame_2 - 0.034 14.3 0.8 0.054 13.7 0.8 1.3 1 0 0 1 1 1 0 Cid1 family poly A polymerase Cir_Bir_Yir PF06022.11 NODE_45046_length_437_cov_78.179104_g34460_i1reverse_frame_2 - 0.0029 17.2 5.3 0.005 16.4 5.3 1.5 1 1 0 1 1 1 1 Plasmodium variant antigen protein Cir/Yir/Bir PspB PF06667.12 NODE_45046_length_437_cov_78.179104_g34460_i1reverse_frame_2 - 0.51 10.4 7.1 0.21 11.7 3.4 2.1 2 0 0 2 2 2 0 Phage shock protein B DUF3139 PF11337.8 NODE_45046_length_437_cov_78.179104_g34460_i1reverse_frame_2 - 4.1 8.1 8.6 9.9 6.9 8.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) GIY-YIG PF01541.24 NODE_45044_length_437_cov_89.067164_g37283_i0forward_frame_2 - 0.0038 17.5 0.1 0.0086 16.3 0.0 1.6 2 0 0 2 2 2 1 GIY-YIG catalytic domain Nucleoside_tran PF01733.18 NODE_45038_length_437_cov_128.987562_g37277_i0forward_frame_3 - 1.2e-13 51.2 0.5 1.5e-13 50.8 0.5 1.1 1 0 0 1 1 1 1 Nucleoside transporter DUF4567 PF15131.6 NODE_45038_length_437_cov_128.987562_g37277_i0forward_frame_3 - 0.4 10.8 2.8 9.2 6.4 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4567) MIG-14_Wnt-bd PF06664.12 NODE_45036_length_437_cov_133.805970_g36277_i1forward_frame_3 - 0.025 13.8 0.1 0.03 13.5 0.1 1.1 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion DUF3623 PF12291.8 NODE_45036_length_437_cov_133.805970_g36277_i1forward_frame_3 - 0.064 12.4 0.1 0.08 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3623) UCH PF00443.29 NODE_45030_length_437_cov_168.529851_g37270_i0reverse_frame_2 - 3.2e-19 69.4 0.6 3.9e-19 69.1 0.6 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_45030_length_437_cov_168.529851_g37270_i0reverse_frame_2 - 0.00013 21.7 0.0 0.00014 21.5 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF3903 PF13043.6 NODE_45024_length_437_cov_250.828358_g37264_i0forward_frame_3 - 0.093 12.5 0.1 0.17 11.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) Pilin_PilX PF11530.8 NODE_45023_length_437_cov_265.631841_g37263_i0reverse_frame_3 - 0.059 13.3 0.1 0.07 13.0 0.1 1.1 1 0 0 1 1 1 0 Minor type IV pilin, PilX Metalloenzyme PF01676.18 NODE_45020_length_437_cov_296.283582_g37260_i0reverse_frame_2 - 0.28 10.5 0.8 0.34 10.2 0.8 1.2 1 0 0 1 1 1 0 Metalloenzyme superfamily RICTOR_M PF14666.6 NODE_45013_length_438_cov_1.531017_g37253_i0forward_frame_3 - 0.024 14.4 1.6 0.033 13.9 1.6 1.4 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain polyprenyl_synt PF00348.17 NODE_45013_length_438_cov_1.531017_g37253_i0forward_frame_2 - 9.3e-40 136.3 0.3 1e-39 136.2 0.3 1.0 1 0 0 1 1 1 1 Polyprenyl synthetase DUF2963 PF11178.8 NODE_45013_length_438_cov_1.531017_g37253_i0forward_frame_2 - 0.2 11.4 1.8 1.4 8.7 0.1 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2963) Sporozoite_P67 PF05642.11 NODE_45009_length_438_cov_2.042184_g37249_i0forward_frame_2 - 0.46 8.5 3.3 0.53 8.3 3.3 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen WD40 PF00400.32 NODE_45008_length_438_cov_2.121588_g37248_i0forward_frame_3 - 3.9e-07 30.7 5.4 2.9e-05 24.7 0.3 3.4 4 0 0 4 4 4 2 WD domain, G-beta repeat Urb2 PF10441.9 NODE_45006_length_438_cov_2.466501_g37246_i0forward_frame_3 - 0.0062 16.5 0.4 0.013 15.4 0.3 1.5 1 1 1 2 2 2 1 Urb2/Npa2 family AAA_8 PF12780.7 NODE_45006_length_438_cov_2.466501_g37246_i0forward_frame_3 - 0.026 13.9 0.1 0.028 13.8 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 RIX1 PF08167.12 NODE_45006_length_438_cov_2.466501_g37246_i0forward_frame_3 - 0.03 14.1 0.1 0.042 13.6 0.1 1.2 1 1 0 1 1 1 0 rRNA processing/ribosome biogenesis SCAPER_N PF16501.5 NODE_45006_length_438_cov_2.466501_g37246_i0forward_frame_3 - 0.11 12.5 0.1 0.27 11.3 0.0 1.6 2 0 0 2 2 2 0 S phase cyclin A-associated protein in the endoplasmic reticulum Virulence_RhuM PF13310.6 NODE_45003_length_438_cov_2.565757_g37243_i0reverse_frame_3 - 2e-09 37.1 0.0 2.8e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Virulence protein RhuM family IMS_HHH PF11798.8 NODE_45001_length_438_cov_2.717122_g37241_i0reverse_frame_2 - 4.6e-07 29.8 0.0 1e-06 28.7 0.0 1.6 1 0 0 1 1 1 1 IMS family HHH motif IMS_C PF11799.8 NODE_45001_length_438_cov_2.717122_g37241_i0reverse_frame_2 - 0.00016 22.3 0.0 0.00024 21.8 0.0 1.2 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain DNA_pol_lambd_f PF10391.9 NODE_45001_length_438_cov_2.717122_g37241_i0reverse_frame_2 - 0.0013 18.5 0.0 0.0028 17.4 0.0 1.6 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda Cdd1 PF11731.8 NODE_45001_length_438_cov_2.717122_g37241_i0reverse_frame_2 - 0.014 15.6 0.0 0.032 14.5 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus HHH PF00633.23 NODE_45001_length_438_cov_2.717122_g37241_i0reverse_frame_2 - 0.13 12.2 0.2 0.58 10.1 0.3 2.0 2 0 0 2 2 2 0 Helix-hairpin-helix motif 5_nucleotid_C PF02872.18 NODE_45000_length_438_cov_2.833747_g37240_i0reverse_frame_2 - 0.083 13.1 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 5'-nucleotidase, C-terminal domain Peripla_BP_3 PF13377.6 NODE_44999_length_438_cov_2.957816_g37239_i0forward_frame_3 - 0.12 12.7 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 Periplasmic binding protein-like domain PapC_N PF13954.6 NODE_44998_length_438_cov_2.970223_g37238_i0reverse_frame_3 - 3.7e-10 40.0 0.0 4.8e-10 39.6 0.0 1.1 1 0 0 1 1 1 1 PapC N-terminal domain IL17_R_N PF15037.6 NODE_44998_length_438_cov_2.970223_g37238_i0reverse_frame_3 - 0.055 12.4 0.0 0.072 12.0 0.0 1.1 1 0 0 1 1 1 0 Interleukin-17 receptor extracellular region Spike_rec_bind PF09408.10 NODE_44998_length_438_cov_2.970223_g37238_i0forward_frame_3 - 0.0055 16.5 0.1 0.0094 15.7 0.1 1.3 1 0 0 1 1 1 1 Spike receptor binding domain Response_reg PF00072.24 NODE_44989_length_438_cov_33.818859_g37229_i0reverse_frame_3 - 1.9e-06 28.0 0.0 2.3e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain ATP-synt_8 PF00895.20 NODE_44987_length_438_cov_66.486352_g37227_i0forward_frame_3 - 8.4 6.9 7.7 1.7 9.2 0.8 2.7 3 0 0 3 3 3 0 ATP synthase protein 8 Colicin_Pyocin PF01320.18 NODE_44984_length_438_cov_74.933002_g37224_i0reverse_frame_3 - 0.0097 16.0 0.4 0.0097 16.0 0.4 1.7 2 0 0 2 2 2 1 Colicin immunity protein / pyocin immunity protein DUF818 PF05677.12 NODE_44984_length_438_cov_74.933002_g37224_i0forward_frame_2 - 1.5 7.7 4.7 2.1 7.2 4.7 1.2 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) ETF_QO PF05187.13 NODE_44983_length_438_cov_79.645161_g37223_i0reverse_frame_2 - 3.5e-18 65.7 0.0 4.9e-18 65.2 0.0 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Borrelia_rep PF03183.13 NODE_44980_length_438_cov_85.012407_g37220_i0forward_frame_2 - 0.037 14.0 6.0 0.081 12.9 0.3 3.4 2 0 0 2 2 2 0 Borrelia repeat protein zf-C2H2_12 PF18658.1 NODE_44977_length_438_cov_90.699752_g37217_i0forward_frame_3 - 0.76 9.4 3.1 6.7 6.4 0.3 2.3 2 0 0 2 2 2 0 Zinc-finger C2H2-type Ribosomal_L11 PF00298.19 NODE_44976_length_438_cov_90.776675_g37216_i0reverse_frame_3 - 2.2e-10 40.9 0.1 3.2e-10 40.4 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 NODE_44976_length_438_cov_90.776675_g37216_i0reverse_frame_3 - 3.2e-06 26.9 0.1 6.9e-06 25.8 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Chal_sti_synt_C PF02797.15 NODE_44976_length_438_cov_90.776675_g37216_i0reverse_frame_3 - 0.079 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Chalcone and stilbene synthases, C-terminal domain TAP35_44 PF07265.11 NODE_44976_length_438_cov_90.776675_g37216_i0forward_frame_3 - 1.9 8.5 5.1 8.1 6.5 0.6 2.3 1 1 1 2 2 2 0 Tapetum specific protein TAP35/TAP44 WBP-1 PF11669.8 NODE_44974_length_438_cov_97.796526_g37214_i0forward_frame_2 - 0.036 14.7 0.1 0.047 14.3 0.1 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 VitD-bind_III PF09164.10 NODE_44966_length_438_cov_139.196030_g37206_i0reverse_frame_3 - 0.74 9.9 3.9 0.28 11.2 1.1 1.7 2 0 0 2 2 2 0 Vitamin D binding protein, domain III RCDG1 PF15725.5 NODE_44966_length_438_cov_139.196030_g37206_i0forward_frame_2 - 5.3 7.5 7.6 9.8 6.7 7.6 1.5 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein DUF2457 PF10446.9 NODE_44966_length_438_cov_139.196030_g37206_i0forward_frame_2 - 5.7 6.0 7.8 6.4 5.8 7.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) NUDIX PF00293.28 NODE_44961_length_438_cov_186.617866_g37201_i0forward_frame_2 - 2e-05 24.6 0.1 3e-05 24.1 0.1 1.3 1 1 0 1 1 1 1 NUDIX domain eIF3_subunit PF08597.10 NODE_44951_length_438_cov_354.925558_g34064_i2forward_frame_3 - 0.076 12.9 4.4 0.099 12.5 4.4 1.1 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Bac_DnaA PF00308.18 NODE_44951_length_438_cov_354.925558_g34064_i2forward_frame_3 - 0.17 11.7 0.3 0.2 11.5 0.3 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein FKBP_N_2 PF18023.1 NODE_44949_length_438_cov_434.975186_g37191_i0reverse_frame_3 - 0.14 12.3 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 BDBT FKBP like N-terminal Tub_N PF16322.5 ORF99589 - 1.6 9.1 10.4 2 8.8 10.4 1.1 1 0 0 1 1 1 0 Tubby N-terminal LLC1 PF14945.6 ORF98689 - 1.2e-07 32.3 1.8 6.6e-07 29.9 1.8 2.1 1 1 0 1 1 1 1 Normal lung function maintenance, Low in Lung Cancer 1 protein FAM183 PF14886.6 ORF98689 - 0.084 13.6 0.1 0.19 12.5 0.0 1.6 2 0 0 2 2 2 0 FAM183A and FAM183B related Synaptobrevin PF00957.21 ORF98528 - 5.6e-12 45.3 6.9 5.6e-12 45.3 6.9 2.1 2 0 0 2 2 2 1 Synaptobrevin Vma12 PF11712.8 ORF98528 - 0.0056 16.7 7.0 0.0056 16.7 7.0 1.5 2 0 0 2 2 2 1 Endoplasmic reticulum-based factor for assembly of V-ATPase AAA_13 PF13166.6 ORF98528 - 0.012 14.3 15.8 0.012 14.3 15.8 1.0 1 0 0 1 1 1 0 AAA domain DUF848 PF05852.11 ORF98528 - 0.014 15.6 10.1 0.018 15.2 10.1 1.2 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) RAMPs PF03787.15 ORF98528 - 0.13 12.3 2.4 0.15 12.0 2.4 1.1 1 0 0 1 1 1 0 RAMP superfamily DUF3452 PF11934.8 ORF98528 - 0.23 11.0 8.6 0.21 11.1 7.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) Spc7 PF08317.11 ORF98528 - 0.56 9.0 19.6 0.72 8.7 19.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF98528 - 1.2 9.2 9.8 0.2 11.7 2.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF98528 - 1.5 8.1 15.6 1.3 8.3 5.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Fzo_mitofusin PF04799.13 ORF98528 - 2.4 7.7 12.3 5.5 6.5 2.7 2.1 1 1 1 2 2 2 0 fzo-like conserved region Exonuc_VII_L PF02601.15 ORF98528 - 7.4 6.0 12.0 8.8 5.8 12.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Lebercilin PF15619.6 ORF97853 - 0.00021 21.0 5.6 0.00027 20.6 5.6 1.1 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF4854 PF16146.5 ORF97853 - 0.00092 19.5 4.2 0.0016 18.8 4.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4854) DASH_Dam1 PF08653.10 ORF97853 - 0.0023 17.7 2.8 1.1 9.1 0.1 2.4 2 0 0 2 2 2 2 DASH complex subunit Dam1 Matrilin_ccoil PF10393.9 ORF97853 - 0.041 13.7 5.2 0.091 12.6 0.2 2.8 3 0 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin Cob_adeno_trans PF01923.18 ORF97853 - 0.11 12.7 0.3 0.14 12.3 0.3 1.1 1 0 0 1 1 1 0 Cobalamin adenosyltransferase CCDC-167 PF15188.6 ORF97853 - 0.12 12.7 4.2 0.92 9.9 4.2 2.1 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 FlaC_arch PF05377.11 ORF97853 - 0.12 12.8 3.3 0.5 10.8 0.6 2.5 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) V-SNARE PF05008.15 ORF97853 - 0.36 11.2 7.4 0.36 11.2 5.3 1.9 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus FapA PF03961.13 ORF97853 - 0.56 8.7 5.3 0.68 8.5 5.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A GrpE PF01025.19 ORF97853 - 0.63 9.7 8.2 0.72 9.5 4.4 2.0 1 1 0 2 2 2 0 GrpE Fib_alpha PF08702.10 ORF97853 - 1.8 8.7 9.2 2.9 8.1 4.8 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family GFA PF04828.14 ORF96085 - 1.1e-06 28.9 0.0 1.9e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme ERGIC_N PF13850.6 ORF95783 - 0.0095 16.3 0.2 0.011 16.0 0.2 1.3 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) PID_2 PF14719.6 ORF94677 - 0.01 15.7 0.3 0.016 15.1 0.0 1.4 2 0 0 2 2 2 0 Phosphotyrosine interaction domain (PTB/PID) Ribosomal_S9 PF00380.19 ORF94067 - 6.3e-33 113.9 0.3 7.1e-33 113.7 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 FKBP_C PF00254.28 ORF93348 - 2.1e-11 44.0 0.0 3.3e-11 43.3 0.0 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Glycophorin_A PF01102.18 ORF93206 - 6.6e-06 26.3 3.1 1.5e-05 25.2 3.1 1.7 1 1 0 1 1 1 1 Glycophorin A TMEM154 PF15102.6 ORF93206 - 3.9e-05 23.6 11.3 7.9e-05 22.6 11.3 1.5 1 1 0 1 1 1 1 TMEM154 protein family Adeno_E3 PF06040.11 ORF93206 - 0.0015 18.7 0.8 0.0019 18.3 0.8 1.3 1 0 0 1 1 1 1 Adenovirus E3 protein Orf78 PF06024.12 ORF93206 - 0.0016 18.7 1.1 0.0016 18.7 1.1 1.8 1 1 1 2 2 2 1 Orf78 (ac78) Shisa PF13908.6 ORF93206 - 0.0052 17.1 0.9 0.0052 17.1 0.9 1.8 1 1 1 2 2 2 1 Wnt and FGF inhibitory regulator S1FA PF04689.13 ORF93206 - 0.0056 16.8 0.0 0.0091 16.1 0.0 1.3 1 0 0 1 1 1 1 DNA binding protein S1FA Plasmodium_Vir PF05795.11 ORF93206 - 0.007 15.8 0.5 0.0075 15.7 0.5 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein TMEM132D_C PF15706.5 ORF93206 - 0.008 15.9 0.2 0.019 14.8 0.2 1.6 1 1 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Peptidase_M56 PF05569.11 ORF93206 - 0.0092 15.2 0.3 0.011 15.0 0.3 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 EphA2_TM PF14575.6 ORF93206 - 0.0097 16.8 0.2 0.021 15.7 0.1 1.6 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain DUF2434 PF10361.9 ORF93206 - 0.013 14.5 1.6 0.018 14.1 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2434) Mid2 PF04478.12 ORF93206 - 0.013 15.3 8.7 0.013 15.3 8.7 2.0 1 1 1 2 2 2 0 Mid2 like cell wall stress sensor Amnionless PF14828.6 ORF93206 - 0.017 14.0 0.1 0.017 13.9 0.1 1.1 1 0 0 1 1 1 0 Amnionless Stevor PF17410.2 ORF93206 - 0.019 14.5 4.1 0.026 14.1 4.1 1.2 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame UL45 PF05473.12 ORF93206 - 0.021 14.5 0.8 0.03 14.0 0.5 1.5 1 1 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like TrbL PF04610.14 ORF93206 - 0.022 14.5 5.0 0.027 14.2 5.0 1.1 1 0 0 1 1 1 0 TrbL/VirB6 plasmid conjugal transfer protein DUF5305 PF17231.2 ORF93206 - 0.028 13.8 5.8 0.055 12.9 5.8 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5305) DUF4690 PF15756.5 ORF93206 - 0.036 14.7 3.4 0.062 13.9 3.4 1.5 1 1 0 1 1 1 0 Small Novel Rich in Cartilage Gemini_mov PF01708.16 ORF93206 - 0.042 13.6 0.0 0.058 13.2 0.0 1.3 1 0 0 1 1 1 0 Geminivirus putative movement protein TMEM51 PF15345.6 ORF93206 - 0.043 13.7 0.1 0.059 13.2 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 51 Saf_2TM PF18303.1 ORF93206 - 0.043 13.4 0.4 0.043 13.4 0.4 1.8 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain Podoplanin PF05808.11 ORF93206 - 0.11 12.6 11.5 0.12 12.5 10.9 1.4 1 1 0 1 1 1 0 Podoplanin FAM163 PF15069.6 ORF93206 - 0.13 12.7 0.2 0.13 12.7 0.2 1.8 2 0 0 2 2 2 0 FAM163 family Adeno_E3_CR2 PF02439.15 ORF93206 - 0.13 12.0 3.2 0.23 11.2 3.2 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Insulin_TMD PF17870.1 ORF93206 - 0.14 12.2 4.9 0.24 11.5 4.9 1.3 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Baculo_11_kDa PF06143.11 ORF93206 - 1.5 8.4 8.0 3.7 7.2 8.0 1.8 1 1 0 1 1 1 0 Baculovirus 11 kDa family ABC_tran PF00005.27 ORF9299 - 1.6e-09 38.4 1.2 2.1e-09 38.0 0.0 1.8 3 0 0 3 3 3 1 ABC transporter SMC_N PF02463.19 ORF9299 - 4.2e-05 23.1 0.3 5.2e-05 22.8 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain CsoSCA PF08936.10 ORF9299 - 0.028 13.1 0.0 0.033 12.9 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase ELL PF10390.9 ORF9299 - 0.061 12.8 0.1 0.093 12.2 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase II elongation factor ELL Cupin_2 PF07883.11 ORF90301 - 5.8e-08 32.3 0.1 1e-07 31.6 0.1 1.4 1 0 0 1 1 1 1 Cupin domain ARD PF03079.14 ORF90301 - 0.13 12.5 0.1 0.22 11.7 0.1 1.3 1 0 0 1 1 1 0 ARD/ARD' family SLBP_RNA_bind PF15247.6 ORF89120 - 1.7e-05 24.8 0.1 2.9e-05 24.1 0.1 1.4 1 0 0 1 1 1 1 Histone RNA hairpin-binding protein RNA-binding domain EF-hand_7 PF13499.6 ORF88988 - 1.6e-24 86.1 1.4 3e-12 46.8 0.2 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF88988 - 1.2e-21 74.6 1.3 1.8e-05 23.9 0.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF88988 - 9.7e-21 73.4 4.0 3.2e-08 33.3 0.3 3.2 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF88988 - 1.8e-19 67.9 2.5 9.6e-05 22.0 0.0 4.1 3 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF88988 - 2.7e-15 55.1 2.4 2.5e-05 23.6 0.0 4.4 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF88988 - 7.6e-06 26.2 0.0 0.0003 21.1 0.0 2.0 1 1 1 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF88988 - 0.00023 21.4 0.0 0.64 10.4 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF88988 - 0.00048 20.1 0.4 0.1 12.5 0.1 2.3 2 0 0 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_11 PF08976.11 ORF88988 - 0.043 14.7 0.1 3.5 8.6 0.0 2.0 1 1 1 2 2 2 0 EF-hand domain PerB PF06590.11 ORF88964 - 0.02 15.4 0.0 0.035 14.6 0.0 1.4 1 0 0 1 1 1 0 PerB protein GST_C PF00043.25 ORF88212 - 1.1e-08 35.2 0.0 2e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF88212 - 5.4e-07 29.5 0.0 8.8e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF88212 - 5.7e-06 26.4 0.0 9.6e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF88212 - 0.2 11.5 0.0 1.4 8.8 0.0 2.0 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain MttA_Hcf106 PF02416.16 ORF87564 - 6.6e-05 22.2 3.6 0.00012 21.3 3.6 1.5 1 1 0 1 1 1 1 mttA/Hcf106 family MAPEG PF01124.18 ORF85551 - 6.7e-19 68.1 0.2 7.9e-19 67.8 0.2 1.1 1 0 0 1 1 1 1 MAPEG family Abhydrolase_1 PF00561.20 ORF85434 - 5e-08 32.9 0.0 5.9e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF85434 - 3.3e-06 27.9 0.0 3.6e-06 27.7 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family FokI_N PF02981.15 ORF85434 - 0.0092 16.1 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 1 Restriction endonuclease FokI, recognition domain UvsW PF11637.8 ORF85434 - 0.044 13.9 0.0 0.079 13.1 0.0 1.4 1 0 0 1 1 1 0 ATP-dependant DNA helicase UvsW Peptidase_S9 PF00326.21 ORF85434 - 0.092 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Prolyl oligopeptidase family Abhydrolase_4 PF08386.10 ORF85434 - 0.093 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 TAP-like protein Kisspeptin PF15152.6 ORF85302 - 2.1 9.2 6.1 0.58 11.0 0.9 2.3 1 1 2 3 3 3 0 Kisspeptin MORN PF02493.20 ORF83737 - 4.5e-35 117.5 27.4 2.2e-06 27.2 2.3 6.1 6 0 0 6 6 6 6 MORN repeat G6PD_C PF02781.16 ORF83159 - 0.091 11.9 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, C-terminal domain PapD-like PF14874.6 ORF83159 - 0.12 12.5 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Flagellar-associated PapD-like Ion_trans PF00520.31 ORF82895 - 1.7e-13 50.4 11.5 1.9e-13 50.3 11.5 1.0 1 0 0 1 1 1 1 Ion transport protein Metallophos PF00149.28 ORF82861 - 0.083 13.4 0.0 0.15 12.6 0.0 1.4 2 0 0 2 2 2 0 Calcineurin-like phosphoesterase DUF2206 PF09971.9 ORF81224 - 0.64 8.7 5.7 0.76 8.5 5.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) Cytochrom_C550 PF14495.6 ORF802 - 4.9e-52 175.2 0.0 5.6e-52 175.1 0.0 1.0 1 0 0 1 1 1 1 Cytochrome c-550 domain Cytochrom_C PF00034.21 ORF802 - 1.3e-08 35.8 0.0 1.9e-08 35.4 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF802 - 4.5e-05 23.7 0.8 0.00012 22.3 0.8 1.8 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C1 PF02167.15 ORF802 - 0.086 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Cytochrome C1 family GDE_N PF12439.8 ORF7930 - 0.13 11.7 0.2 0.14 11.6 0.2 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme N terminal Connexin PF00029.19 ORF7867 - 0.014 15.2 0.4 0.017 14.9 0.4 1.2 1 0 0 1 1 1 0 Connexin Tmemb_9 PF05434.11 ORF7867 - 0.019 14.9 0.3 0.028 14.3 0.3 1.4 1 0 0 1 1 1 0 TMEM9 MAP17 PF15807.5 ORF7867 - 0.02 15.1 0.2 0.033 14.4 0.2 1.4 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 SID-1_RNA_chan PF13965.6 ORF7867 - 0.022 13.2 2.2 0.024 13.1 2.2 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Neur_chan_memb PF02932.16 ORF7867 - 0.03 14.4 1.5 0.044 13.8 1.5 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4446 PF14584.6 ORF7867 - 0.049 13.6 1.8 0.07 13.1 1.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) CLN3 PF02487.17 ORF7867 - 0.076 12.1 0.8 0.087 11.9 0.8 1.1 1 0 0 1 1 1 0 CLN3 protein OSTbeta PF15048.6 ORF7867 - 0.14 12.3 2.0 0.21 11.7 1.6 1.5 1 1 0 1 1 1 0 Organic solute transporter subunit beta protein EOS1 PF12326.8 ORF7867 - 0.17 11.8 1.7 0.19 11.6 1.7 1.2 1 0 0 1 1 1 0 N-glycosylation protein TMEM154 PF15102.6 ORF7867 - 0.41 10.6 10.4 0.47 10.3 7.8 2.4 1 1 1 2 2 2 0 TMEM154 protein family DUF3139 PF11337.8 ORF7867 - 1.1 10.0 8.4 2.2 9.0 4.5 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3139) DUF5090 PF17009.5 ORF7867 - 9.4 6.2 10.1 0.84 9.6 5.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF5090) FAM221 PF14753.6 ORF78276 - 0.063 12.8 0.6 0.1 12.2 0.6 1.3 1 0 0 1 1 1 0 Protein FAM221A/B Dynein_C PF18199.1 ORF78033 - 7.9e-44 150.1 0.0 8.8e-44 150.0 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain DUF1456 PF07308.13 ORF76127 - 0.023 15.0 0.1 0.023 15.0 0.1 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1456) DUF1445 PF07286.12 ORF76127 - 2.7 7.9 7.7 3.9 7.4 7.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1445) T2SSG PF08334.11 ORF75577 - 4.3e-37 126.5 0.3 5.1e-37 126.3 0.3 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein G N_methyl PF07963.12 ORF75577 - 6.9e-10 38.1 1.4 1.1e-09 37.4 1.4 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif Apolipoprotein PF01442.18 ORF74943 - 1.4e-05 25.0 13.8 0.0085 16.0 8.0 2.1 1 1 0 2 2 2 2 Apolipoprotein A1/A4/E domain DUF1640 PF07798.11 ORF74943 - 0.00086 19.4 1.4 0.0011 19.0 1.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) ZYG-11_interact PF05884.12 ORF74943 - 0.0094 15.4 1.5 0.013 15.0 1.5 1.2 1 0 0 1 1 1 1 Interactor of ZYG-11 DUF819 PF05684.12 ORF74943 - 0.018 14.1 0.3 0.021 13.9 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF819) DUF3584 PF12128.8 ORF74943 - 0.019 12.5 6.9 0.022 12.3 6.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Exonuc_VII_L PF02601.15 ORF74943 - 0.021 14.4 2.1 0.022 14.3 2.1 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Neur_chan_memb PF02932.16 ORF74943 - 0.035 14.2 0.4 0.051 13.6 0.4 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Rad51 PF08423.11 ORF74943 - 0.057 12.7 0.5 0.072 12.3 0.5 1.1 1 0 0 1 1 1 0 Rad51 Tir_receptor_M PF03549.14 ORF74943 - 0.057 13.8 0.2 0.1 13.0 0.2 1.4 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) intimin-binding domain MscS_TM PF12794.7 ORF74943 - 0.11 11.4 1.0 0.12 11.2 1.0 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF2207 PF09972.9 ORF74943 - 0.19 10.5 2.0 0.3 9.8 2.0 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) OmpH PF03938.14 ORF74943 - 0.2 12.0 9.9 0.35 11.2 9.9 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) POTRA_TamA_1 PF17243.2 ORF74943 - 0.3 11.2 3.8 2.5 8.3 1.4 2.3 1 1 1 2 2 2 0 POTRA domain TamA domain 1 DUF2937 PF11157.8 ORF74943 - 0.69 9.6 5.8 0.56 9.9 3.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2937) DotU PF09850.9 ORF74943 - 1.2 8.9 5.2 9.2 5.9 1.9 2.1 1 1 1 2 2 2 0 Type VI secretion system protein DotU EMP24_GP25L PF01105.24 ORF74943 - 1.9 8.4 9.4 1.8 8.5 3.8 2.1 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD GTA_holin_3TM PF11351.8 ORF74943 - 2.2 8.8 9.7 8.7 6.9 1.9 2.6 1 1 1 2 2 2 0 Holin of 3TMs, for gene-transfer release CLZ PF16526.5 ORF74943 - 5.3 7.5 8.6 1.1 9.7 4.2 2.2 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels CHD5 PF04420.14 ORF74943 - 6.3 6.6 9.0 2.5 7.9 1.4 2.8 2 1 1 3 3 3 0 CHD5-like protein YlqD PF11068.8 ORF74943 - 7.1 7.0 13.8 29 5.1 13.8 1.8 1 1 0 1 1 1 0 YlqD protein KH_dom-like PF14714.6 ORF74348 - 0.031 14.6 0.2 0.052 13.9 0.2 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PRR20 PF15708.5 ORF74348 - 0.2 11.5 0.2 0.26 11.1 0.2 1.1 1 0 0 1 1 1 0 Proline-rich protein family 20 IMUP PF15761.5 ORF74348 - 2.5 8.9 8.3 4 8.2 8.3 1.3 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF2406 PF10295.9 ORF74215 - 0.15 12.8 0.0 0.22 12.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein (DUF2406) Peptidase_S49_N PF08496.10 ORF7328 - 0.0011 19.1 1.6 0.0012 18.9 1.6 1.2 1 0 0 1 1 1 1 Peptidase family S49 N-terminal Nexin_C PF08628.12 ORF7328 - 0.098 13.2 0.2 0.15 12.7 0.2 1.3 1 0 0 1 1 1 0 Sorting nexin C terminal GST_C_2 PF13410.6 ORF72413 - 5.1e-10 39.2 0.3 5.1e-10 39.2 0.3 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF72413 - 7.6e-09 35.7 0.2 1.5e-08 34.8 0.0 1.5 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF72413 - 1.4e-06 28.4 0.0 2e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Cuticle_2 PF08184.11 ORF72413 - 0.018 15.0 2.1 0.034 14.1 2.1 1.4 1 0 0 1 1 1 0 Cuticle protein 7 isoform family IF-2B PF01008.17 ORF71877 - 2.6e-36 125.3 0.0 2.9e-36 125.2 0.0 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family bZIP_1 PF00170.21 ORF69780 - 0.0077 16.3 0.6 0.012 15.6 0.6 1.3 1 0 0 1 1 1 1 bZIP transcription factor APC_N_CC PF16689.5 ORF69780 - 0.029 14.4 1.1 0.056 13.5 1.1 1.4 1 0 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain Cnn_1N PF07989.11 ORF69780 - 0.047 13.9 0.2 0.085 13.0 0.2 1.3 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 End3 PF12761.7 ORF69780 - 0.05 13.8 0.1 0.065 13.4 0.1 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 YabA PF06156.13 ORF69780 - 0.059 14.0 0.1 0.09 13.4 0.1 1.3 1 0 0 1 1 1 0 Initiation control protein YabA JIP_LZII PF16471.5 ORF69780 - 0.075 13.2 1.8 0.3 11.3 0.8 2.0 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II PolyA_pol_arg_C PF12626.7 ORF69400 - 6.1e-42 142.5 2.7 7.6e-42 142.1 2.7 1.0 1 0 0 1 1 1 1 Polymerase A arginine-rich C-terminus Myb_DNA-bind_6 PF13921.6 ORF68783 - 8.6e-17 61.1 2.8 8.2e-12 45.2 0.6 2.1 1 1 1 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 ORF68783 - 8.7e-16 57.8 0.1 2.4e-13 50.1 0.2 2.2 2 0 0 2 2 2 2 Myb-like DNA-binding domain USP8_dimer PF08969.11 ORF68783 - 0.0014 18.8 2.7 0.0022 18.2 2.7 1.4 1 0 0 1 1 1 1 USP8 dimerisation domain WIYLD PF10440.9 ORF68783 - 0.0016 18.2 1.0 0.57 10.0 0.1 2.4 2 0 0 2 2 2 2 Ubiquitin-binding WIYLD domain Tub PF01167.18 ORF68783 - 0.0097 15.7 0.4 0.011 15.5 0.4 1.0 1 0 0 1 1 1 1 Tub family Myb_DNA-bind_7 PF15963.5 ORF68783 - 0.013 15.4 2.9 0.26 11.2 1.2 2.2 1 1 1 2 2 2 0 Myb DNA-binding like Promethin PF16015.5 ORF68119 - 0.096 12.6 6.8 0.16 11.9 6.8 1.4 1 0 0 1 1 1 0 Promethin CrgA PF06781.12 ORF68119 - 0.17 12.0 2.9 0.3 11.2 2.9 1.4 1 0 0 1 1 1 0 Cell division protein CrgA AviRa PF11599.8 ORF67623 - 0.081 12.4 0.1 0.1 12.0 0.1 1.2 1 0 0 1 1 1 0 RRNA methyltransferase AviRa DUF3342 PF11822.8 ORF66778 - 0.1 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) 2OG-FeII_Oxy_3 PF13640.6 ORF66147 - 2.5e-09 37.9 0.0 1.1e-08 35.8 0.0 1.8 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF66147 - 0.11 13.0 0.1 0.21 12.1 0.1 1.7 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Death PF00531.22 ORF65830 - 0.029 14.5 1.3 0.051 13.7 1.3 1.4 1 0 0 1 1 1 0 Death domain CD24 PF14984.6 ORF65830 - 0.12 12.7 0.2 0.21 11.8 0.2 1.4 1 0 0 1 1 1 0 CD24 protein Asp-Al_Ex PF06826.12 ORF65809 - 9.1e-40 136.2 7.2 1e-39 136.0 7.2 1.0 1 0 0 1 1 1 1 Predicted Permease Membrane Region DUF3139 PF11337.8 ORF64400 - 0.44 11.2 6.3 0.12 13.0 3.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) DUF1073 PF06381.11 ORF63964 - 0.23 10.2 0.0 0.34 9.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1073) Syntaxin PF00804.25 ORF63785 - 3.7e-16 59.4 2.2 3.7e-16 59.4 2.2 1.6 2 0 0 2 2 2 1 Syntaxin SNARE PF05739.19 ORF63785 - 5.6e-07 29.5 2.9 7.5e-07 29.1 1.0 2.0 2 0 0 2 2 2 1 SNARE domain DASH_Dad4 PF08650.10 ORF63785 - 0.015 15.2 0.3 1.2 9.2 0.1 2.3 1 1 1 2 2 2 0 DASH complex subunit Dad4 Syntaxin_2 PF14523.6 ORF63785 - 0.24 11.8 9.6 4.9 7.6 0.6 3.1 1 1 1 3 3 3 0 Syntaxin-like protein NPV_P10 PF05531.12 ORF63785 - 0.33 11.4 3.8 0.31 11.5 0.7 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein zf-RING_2 PF13639.6 ORF63050 - 1.8e-08 34.6 15.4 3.4e-08 33.7 15.4 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF63050 - 1.2e-05 24.9 5.1 1.2e-05 24.9 5.1 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF63050 - 2.2e-05 24.2 15.5 4.1e-05 23.3 15.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF63050 - 9.3e-05 22.6 13.7 0.00019 21.6 13.7 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF63050 - 0.0065 16.3 15.6 0.037 13.9 14.9 2.1 1 1 1 2 2 2 2 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF63050 - 0.018 14.6 14.0 0.032 13.9 14.0 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Fer2 PF00111.27 ORF63050 - 0.029 14.3 5.1 0.86 9.6 2.8 2.2 1 1 1 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain zf-C3HC4_3 PF13920.6 ORF63050 - 0.047 13.6 14.2 0.082 12.8 14.2 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF63050 - 0.19 11.8 9.8 0.31 11.1 9.8 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF63050 - 0.2 11.7 17.5 0.061 13.4 9.0 2.6 2 0 0 2 2 2 0 RING-type zinc-finger Baculo_IE-1 PF05290.11 ORF63050 - 6.7 6.7 10.3 2 8.4 0.1 2.1 1 1 1 2 2 2 0 Baculovirus immediate-early protein (IE-0) zf-C3HC4_4 PF15227.6 ORF63050 - 8.5 6.6 18.3 8.6 6.6 1.8 2.6 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING ABC_tran PF00005.27 ORF62863 - 1.2e-10 42.1 0.1 2.2e-10 41.2 0.1 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF62863 - 2.4e-05 23.9 0.3 2.9e-05 23.6 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Acetyltransf_11 PF13720.6 ORF61229 - 1.1e-29 102.7 0.0 1.4e-29 102.3 0.0 1.2 1 0 0 1 1 1 1 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Hexapep PF00132.24 ORF61229 - 3e-08 33.1 8.5 1e-05 25.0 0.4 2.5 1 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF61229 - 0.36 10.6 3.3 4.8 7.0 0.1 2.4 2 1 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase MFS_1 PF07690.16 ORF59401 - 0.0013 17.7 6.5 0.0061 15.5 6.4 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF59401 - 0.0025 16.4 4.7 0.004 15.8 4.7 1.4 1 1 0 1 1 1 1 MFS/sugar transport protein Peptidase_C2 PF00648.21 ORF57179 - 5.6e-28 97.8 0.0 7.4e-28 97.4 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease DUF5082 PF16888.5 ORF53682 - 0.0056 16.9 4.8 0.0056 16.9 4.8 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF5082) FDX-ACB PF03147.14 ORF53682 - 0.021 15.2 1.4 0.035 14.5 0.8 1.6 1 1 1 2 2 2 0 Ferredoxin-fold anticodon binding domain Exonuc_VII_L PF02601.15 ORF53682 - 0.045 13.3 9.3 0.053 13.1 9.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit FlaC_arch PF05377.11 ORF53682 - 0.087 13.2 1.3 0.087 13.2 1.3 3.0 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Apolipoprotein PF01442.18 ORF53682 - 0.1 12.5 7.2 0.31 10.9 7.0 1.7 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Fib_alpha PF08702.10 ORF53682 - 0.12 12.5 11.7 0.089 13.0 9.6 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF1640 PF07798.11 ORF53682 - 0.22 11.6 12.3 0.33 11.0 12.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) DUF745 PF05335.13 ORF53682 - 0.49 10.1 5.2 0.44 10.2 3.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 ORF53682 - 1.1 9.4 7.9 4.4 7.4 6.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) SlyX PF04102.12 ORF53682 - 1.3 9.7 8.8 1.5 9.5 4.6 2.7 2 1 1 3 3 3 0 SlyX Cache_3-Cache_2 PF17201.4 ORF53682 - 5.4 6.2 7.5 12 5.1 7.4 1.6 1 1 0 1 1 1 0 Cache 3/Cache 2 fusion domain DUF641 PF04859.12 ORF53682 - 6.7 7.1 9.8 2.2 8.6 4.3 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) YiaAB PF05360.14 ORF53652 - 1.7e-40 137.0 13.1 5.8e-21 74.5 1.5 2.1 2 0 0 2 2 2 2 yiaA/B two helix domain DUF4956 PF16316.5 ORF53652 - 0.1 12.3 4.3 0.044 13.4 1.6 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4956) MARVEL PF01284.23 ORF53652 - 0.1 12.6 8.1 0.018 15.1 2.7 1.9 1 1 1 2 2 2 0 Membrane-associating domain DUF1218 PF06749.12 ORF53652 - 0.17 12.4 9.8 0.19 12.3 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1218) Claudin_2 PF13903.6 ORF53652 - 1.8 8.3 7.3 0.91 9.2 2.8 2.1 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction DUF3040 PF11239.8 ORF53652 - 1.9 8.8 7.1 2.5 8.4 1.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) FtsX PF02687.21 ORF53652 - 2.2 8.8 9.4 1.3 9.5 6.5 2.1 1 1 0 1 1 1 0 FtsX-like permease family DUF202 PF02656.15 ORF53652 - 5.8 7.4 10.0 4.1 7.9 0.2 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF202) Tyr_Deacylase PF02580.16 ORF53542 - 6.3e-55 185.7 0.1 7.7e-55 185.4 0.1 1.0 1 0 0 1 1 1 1 D-Tyr-tRNA(Tyr) deacylase Dna2 PF08696.11 ORF52142 - 0.02 14.7 1.9 0.028 14.2 1.9 1.3 1 1 0 1 1 1 0 DNA replication factor Dna2 Neur_chan_memb PF02932.16 ORF52142 - 0.84 9.6 8.0 0.99 9.4 8.0 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region HAD_2 PF13419.6 ORF51879 - 0.02 15.0 0.2 0.22 11.6 0.0 2.1 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase ABC_tran PF00005.27 ORF51752 - 1.3e-10 41.9 0.1 2.2e-10 41.2 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF51752 - 2.4e-05 23.9 0.3 3e-05 23.6 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain 7tm_7 PF08395.12 ORF5155 - 0.07 12.3 1.8 0.11 11.7 1.8 1.3 1 0 0 1 1 1 0 7tm Chemosensory receptor SPO22 PF08631.10 ORF51461 - 0.0059 16.1 2.4 0.0078 15.7 2.4 1.2 1 0 0 1 1 1 1 Meiosis protein SPO22/ZIP4 like 2OG-FeII_Oxy_3 PF13640.6 ORF50924 - 2.5e-09 37.9 0.0 1.1e-08 35.8 0.0 1.8 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF50924 - 0.11 13.0 0.1 0.21 12.1 0.1 1.7 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily TRI5 PF06330.11 ORF5043 - 0.002 17.0 0.1 0.0023 16.9 0.1 1.1 1 0 0 1 1 1 1 Trichodiene synthase (TRI5) IML1 PF12257.8 ORF5043 - 0.031 13.4 0.2 0.035 13.2 0.2 1.1 1 0 0 1 1 1 0 Vacuolar membrane-associated protein Iml1 KH_dom-like PF14714.6 ORF48772 - 0.031 14.6 0.2 0.052 13.9 0.2 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PRR20 PF15708.5 ORF48772 - 0.2 11.5 0.2 0.26 11.1 0.2 1.1 1 0 0 1 1 1 0 Proline-rich protein family 20 IMUP PF15761.5 ORF48772 - 2.5 8.9 8.3 4 8.2 8.3 1.3 1 0 0 1 1 1 0 Immortalisation up-regulated protein Sugar_tr PF00083.24 ORF47591 - 1.3e-24 86.9 5.4 1.4e-24 86.8 5.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MscS_TM PF12794.7 ORF47591 - 0.38 9.6 2.4 1.8 7.3 2.4 1.8 1 1 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF1600 PF07667.11 ORF47574 - 0.066 13.4 0.0 0.07 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) ERGIC_N PF13850.6 ORF47574 - 0.096 13.0 0.1 0.14 12.5 0.1 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4577 PF15145.6 ORF47574 - 0.1 12.7 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) MIB_HERC2 PF06701.13 ORF4743 - 1.8e-09 37.7 0.0 3.4e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 Mib_herc2 TPR_1 PF00515.28 ORF46403 - 3e-10 39.5 6.2 4.9e-09 35.6 0.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF46403 - 7.1e-09 35.1 2.6 4.4e-07 29.5 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF46403 - 1e-05 25.5 0.1 0.045 14.1 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF46403 - 1.1e-05 25.2 1.8 0.0005 20.1 0.0 3.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF46403 - 0.0031 17.2 3.7 0.44 10.3 0.0 3.9 2 1 1 3 3 3 2 TPR repeat TOM20_plant PF06552.12 ORF46403 - 0.0034 17.1 0.2 0.0089 15.8 0.2 1.8 1 1 0 1 1 1 1 Plant specific mitochondrial import receptor subunit TOM20 TPR_12 PF13424.6 ORF46403 - 0.0066 16.7 0.3 0.032 14.5 0.0 2.1 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF46403 - 0.011 15.9 0.0 0.049 13.8 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF46403 - 0.067 13.2 0.2 0.28 11.3 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF3013 PF11217.8 ORF46207 - 0.0057 16.5 0.9 1.8 8.4 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF3013) TGS PF02824.21 ORF46207 - 0.14 12.3 0.0 0.97 9.5 0.0 2.0 2 0 0 2 2 2 0 TGS domain PSS PF03034.15 ORF45152 - 6.2e-07 29.4 0.4 8.8e-07 28.9 0.1 1.4 2 0 0 2 2 2 1 Phosphatidyl serine synthase MCU PF04678.13 ORF45152 - 0.065 13.3 0.4 0.11 12.6 0.1 1.5 2 0 0 2 2 2 0 Mitochondrial calcium uniporter ABC_tran PF00005.27 ORF4446 - 1e-09 39.0 0.0 1e-09 39.0 0.0 1.7 3 0 0 3 3 3 1 ABC transporter SMC_N PF02463.19 ORF4446 - 3.8e-05 23.2 0.3 4.8e-05 22.9 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain CsoSCA PF08936.10 ORF4446 - 0.027 13.2 0.0 0.031 13.0 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase ELL PF10390.9 ORF4446 - 0.051 13.1 0.1 0.08 12.4 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase II elongation factor ELL Ldt_C PF17969.1 ORF43480 - 0.37 11.5 2.2 0.72 10.6 0.2 2.3 1 1 2 3 3 3 0 L,D-transpeptidase C-terminal domain Myc_target_1 PF15179.6 ORF43480 - 0.85 9.5 7.2 0.2 11.5 3.4 1.8 1 1 0 2 2 2 0 Myc target protein 1 EGF_2 PF07974.13 ORF42980 - 0.00014 22.1 17.5 0.00019 21.7 17.5 1.2 1 0 0 1 1 1 1 EGF-like domain hEGF PF12661.7 ORF42980 - 0.01 16.4 6.1 0.022 15.4 6.1 1.6 1 0 0 1 1 1 0 Human growth factor-like EGF I-EGF_1 PF18372.1 ORF42980 - 0.015 15.4 9.0 0.026 14.6 9.0 1.4 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 EGF_Tenascin PF18720.1 ORF42980 - 0.069 13.2 9.2 0.098 12.7 9.2 1.2 1 0 0 1 1 1 0 Tenascin EGF domain EGF PF00008.27 ORF42980 - 0.19 12.1 8.8 0.29 11.5 8.8 1.3 1 0 0 1 1 1 0 EGF-like domain H_PPase PF03030.16 ORF42834 - 1.9e-58 198.7 0.9 2.1e-58 198.5 0.9 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase PAP_fibrillin PF04755.12 ORF42445 - 7.7e-07 29.3 0.0 1.8e-06 28.0 0.0 1.5 1 1 0 1 1 1 1 PAP_fibrillin gerPA PF10676.9 ORF40280 - 0.016 15.4 2.2 0.031 14.5 2.1 1.6 1 1 0 1 1 1 0 Spore germination protein gerPA/gerPF DUF3584 PF12128.8 ORF3998 - 0.53 7.7 10.8 0.65 7.4 10.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC_tran PF00005.27 ORF39181 - 1e-09 39.0 0.0 1e-09 39.0 0.0 1.7 3 0 0 3 3 3 1 ABC transporter SMC_N PF02463.19 ORF39181 - 3.8e-05 23.2 0.3 4.8e-05 22.9 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain CsoSCA PF08936.10 ORF39181 - 0.027 13.2 0.0 0.031 13.0 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase ELL PF10390.9 ORF39181 - 0.051 13.1 0.1 0.08 12.4 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase II elongation factor ELL Mrx7 PF10906.8 ORF38740 - 0.011 16.0 0.2 0.024 14.9 0.2 1.7 1 1 0 1 1 1 0 MIOREX complex component 7 Clathrin PF00637.20 ORF38397 - 0.029 14.2 1.1 0.039 13.8 1.1 1.1 1 0 0 1 1 1 0 Region in Clathrin and VPS DUF5625 PF18539.1 ORF36288 - 0.2 12.0 4.3 0.16 12.2 3.0 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5625) Peptidase_M18 PF02127.15 ORF35679 - 1.2e-52 179.2 0.1 1.4e-52 179.0 0.1 1.0 1 0 0 1 1 1 1 Aminopeptidase I zinc metalloprotease (M18) Peptidase_M42 PF05343.14 ORF35679 - 0.00049 19.2 0.1 0.00056 19.0 0.1 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase CrgA PF06781.12 ORF35559 - 0.00093 19.2 1.7 0.0019 18.2 1.7 1.5 1 0 0 1 1 1 1 Cell division protein CrgA UPF0560 PF10577.9 ORF35559 - 0.024 13.2 0.0 0.03 12.9 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 TMEM154 PF15102.6 ORF35559 - 0.032 14.1 0.8 0.055 13.4 0.8 1.4 1 0 0 1 1 1 0 TMEM154 protein family PspB PF06667.12 ORF35559 - 0.14 12.2 2.4 0.27 11.3 2.4 1.5 1 0 0 1 1 1 0 Phage shock protein B TPR_2 PF07719.17 ORF35202 - 0.014 15.4 0.8 0.028 14.5 0.2 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF35202 - 0.016 15.0 1.0 0.031 14.1 0.2 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat Sugar_tr PF00083.24 ORF35151 - 3e-20 72.5 2.5 3.2e-20 72.5 2.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter TcpE PF12648.7 ORF35151 - 0.2 12.2 2.2 0.18 12.3 1.2 1.5 1 1 0 1 1 1 0 TcpE family DUF997 PF06196.12 ORF35151 - 1.1 9.3 6.7 0.49 10.4 1.2 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF997) Clat_adaptor_s PF01217.20 ORF34050 - 1.3e-42 145.0 4.8 1.6e-42 144.8 4.8 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain Pkinase PF00069.25 ORF33915 - 0.00037 20.0 0.0 0.00044 19.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33915 - 0.035 13.4 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase SWIM PF04434.17 ORF33649 - 0.35 10.6 1.9 6.8 6.5 0.1 2.4 2 0 0 2 2 2 0 SWIM zinc finger DUF3678 PF12435.8 ORF32756 - 2.1 7.8 13.5 9.5 5.7 5.1 3.8 3 1 0 3 3 3 0 Protein of unknown function (DUF3678) Chitin_synth_2 PF03142.15 ORF32391 - 0.18 10.4 3.3 0.25 9.9 3.3 1.2 1 0 0 1 1 1 0 Chitin synthase CSRNP_N PF16019.5 ORF32391 - 0.24 11.3 12.0 0.28 11.0 12.0 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus DUF2374 PF09574.10 ORF31809 - 0.11 12.3 0.6 0.18 11.6 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (Duf2374) rve PF00665.26 ORF3140 - 2.1e-12 47.3 0.0 2.8e-12 46.9 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain TFA2_Winged_2 PF18121.1 ORF30799 - 0.012 15.3 1.1 0.012 15.3 1.1 1.8 2 0 0 2 2 2 0 TFA2 Winged helix domain 2 Baculo_PEP_C PF04513.12 ORF30799 - 0.045 13.8 8.7 0.31 11.1 8.4 2.2 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Utp11 PF03998.13 ORF30799 - 0.11 12.4 14.7 0.13 12.2 14.7 1.0 1 0 0 1 1 1 0 Utp11 protein Fib_alpha PF08702.10 ORF30799 - 0.13 12.5 18.0 1.9 8.7 16.4 2.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Apolipoprotein PF01442.18 ORF30799 - 0.13 12.2 8.4 0.058 13.3 2.6 2.0 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain Med9 PF07544.13 ORF30799 - 0.15 12.2 18.6 0.13 12.4 4.2 3.5 1 1 2 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 EF-hand_7 PF13499.6 ORF30799 - 0.16 12.5 5.5 0.11 13.0 3.3 1.9 2 1 0 2 2 1 0 EF-hand domain pair Exonuc_VII_L PF02601.15 ORF30799 - 0.23 11.0 9.9 0.37 10.3 9.9 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Golgin_A5 PF09787.9 ORF30799 - 0.26 10.7 18.9 0.33 10.4 18.9 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 HIP1_clath_bdg PF16515.5 ORF30799 - 0.29 11.8 19.7 0.9 10.2 9.6 2.1 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 SlyX PF04102.12 ORF30799 - 0.34 11.6 12.4 1.3 9.7 0.5 3.3 1 1 2 3 3 3 0 SlyX Phage_HK97_TLTM PF06120.11 ORF30799 - 0.38 9.9 22.2 2 7.6 10.6 2.1 1 1 1 2 2 2 0 Tail length tape measure protein DUF1525 PF07511.11 ORF30799 - 0.38 10.9 5.9 2 8.6 0.4 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1525) DUF5082 PF16888.5 ORF30799 - 0.4 11.0 17.9 0.084 13.2 14.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Bacillus_HBL PF05791.11 ORF30799 - 0.45 10.3 15.9 0.77 9.6 4.6 2.3 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) HMMR_N PF15905.5 ORF30799 - 0.85 9.0 26.6 0.3 10.5 14.9 2.0 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal Transglut_i_TM PF14400.6 ORF30799 - 0.97 9.5 8.9 7.1 6.7 8.9 2.0 1 1 0 1 1 1 0 Inactive transglutaminase fused to 7 transmembrane helices DUF16 PF01519.16 ORF30799 - 0.98 9.9 23.5 1.4 9.5 11.1 2.3 1 1 1 2 2 2 0 Protein of unknown function DUF16 IL11 PF07400.11 ORF30799 - 0.98 9.0 5.9 2.3 7.9 5.9 1.6 1 1 0 1 1 1 0 Interleukin 11 DUF1493 PF07377.12 ORF30799 - 1.1 9.8 6.5 1.3 9.6 5.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1493) IFT57 PF10498.9 ORF30799 - 1.2 8.1 20.4 0.41 9.6 11.3 1.9 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 DUF3450 PF11932.8 ORF30799 - 2.2 7.5 15.9 0.88 8.8 6.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) FlgM PF04316.13 ORF30799 - 2.2 8.7 7.7 17 5.9 3.5 3.1 2 2 0 2 2 2 0 Anti-sigma-28 factor, FlgM Spc7 PF08317.11 ORF30799 - 2.3 7.0 22.1 0.6 8.9 11.9 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein ABC_tran_CTD PF16326.5 ORF30799 - 3.2 8.1 14.4 2.8 8.3 0.5 3.1 2 1 1 3 3 3 0 ABC transporter C-terminal domain ACCA PF03255.14 ORF30799 - 3.3 7.6 15.7 3.8 7.4 2.2 2.3 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Syntaxin-6_N PF09177.11 ORF30799 - 3.8 8.1 14.2 2.5 8.7 5.0 2.1 1 1 1 2 2 2 0 Syntaxin 6, N-terminal TBCA PF02970.16 ORF30799 - 4 7.8 21.5 0.55 10.6 7.9 2.5 1 1 1 2 2 2 0 Tubulin binding cofactor A DUF4407 PF14362.6 ORF30799 - 4.5 6.6 11.1 23 4.2 11.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Lysine_decarbox PF03641.14 ORF30060 - 6.9e-29 100.6 0.0 9.4e-29 100.2 0.0 1.2 1 0 0 1 1 1 1 Possible lysine decarboxylase LDcluster4 PF18306.1 ORF30060 - 0.0025 17.4 0.0 0.0034 17.0 0.0 1.4 1 0 0 1 1 1 1 SLOG cluster4 family LysR_substrate PF03466.20 ORF2931 - 1.4e-14 54.0 0.1 2.1e-14 53.4 0.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain Cloacin_immun PF03513.14 ORF27270 - 0.16 12.3 1.2 5.7 7.4 0.2 2.4 2 1 0 2 2 2 0 Cloacin immunity protein MatE PF01554.18 ORF26677 - 2e-23 82.8 5.9 3.2e-23 82.2 5.9 1.3 1 0 0 1 1 1 1 MatE DUF3493 PF11998.8 ORF26677 - 2.3 8.4 6.3 2.1 8.6 0.2 2.8 2 1 1 3 3 3 0 Low psii accumulation1 / Rep27 Peptidase_C2 PF00648.21 ORF26177 - 5.6e-28 97.8 0.0 7.4e-28 97.4 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Ras PF00071.22 ORF25857 - 1.8e-40 138.2 0.2 2.3e-40 137.9 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF25857 - 4.7e-31 107.5 0.1 5.8e-31 107.2 0.1 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF25857 - 2.5e-09 36.8 0.2 2.9e-09 36.6 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF25857 - 2.1e-05 24.6 0.0 2.9e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF25857 - 0.00019 20.9 0.0 0.00022 20.7 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region AAA_7 PF12775.7 ORF25857 - 0.0033 17.0 0.0 0.0046 16.5 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_22 PF13401.6 ORF25857 - 0.0033 17.7 0.0 0.0072 16.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF25857 - 0.02 14.8 0.0 0.028 14.3 0.0 1.4 1 1 0 1 1 1 0 RsgA GTPase DAP3 PF10236.9 ORF25857 - 0.021 14.0 0.0 0.029 13.6 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 cobW PF02492.19 ORF25857 - 0.035 13.7 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 ORF25857 - 0.05 13.5 0.0 0.1 12.5 0.0 1.5 2 0 0 2 2 2 0 NACHT domain AAA_29 PF13555.6 ORF25857 - 0.056 13.2 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NB-ARC PF00931.22 ORF25857 - 0.06 12.5 0.0 0.06 12.5 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Septin PF00735.18 ORF25857 - 0.078 12.3 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 Septin AAA_16 PF13191.6 ORF25857 - 0.08 13.3 0.1 0.27 11.6 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 ORF25857 - 0.1 13.1 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 ORF25857 - 0.17 11.1 0.0 1.8 7.8 0.0 2.1 1 1 1 2 2 2 0 Zeta toxin Copine PF07002.16 ORF25060 - 7.5e-44 149.8 0.3 8.2e-44 149.6 0.3 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF25060 - 9.7e-08 32.4 0.1 1.3e-07 31.9 0.1 1.2 1 1 0 1 1 1 1 vWA found in TerF C terminus VWA PF00092.28 ORF25060 - 0.006 16.9 0.0 0.01 16.1 0.0 1.3 1 1 0 1 1 1 1 von Willebrand factor type A domain Toxin_19 PF08088.12 ORF2245 - 1.2 9.3 10.6 0.082 13.0 2.6 2.3 2 0 0 2 2 2 0 Conotoxin I-superfamily Oxidored-like PF09791.9 ORF2245 - 4 7.2 14.5 0.57 9.9 3.5 2.4 2 0 0 2 2 2 0 Oxidoreductase-like protein, N-terminal Sda PF08970.10 ORF21893 - 0.039 13.7 0.6 0.11 12.2 0.1 2.0 2 0 0 2 2 2 0 Sporulation inhibitor A DUF1068 PF06364.12 ORF21893 - 0.19 11.6 3.1 0.13 12.1 0.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1068) PCI PF01399.27 ORF2183 - 2.1e-11 44.2 1.1 3.5e-11 43.5 1.1 1.4 1 0 0 1 1 1 1 PCI domain DDRGK PF09756.9 ORF2183 - 0.0024 17.5 1.1 0.0029 17.2 1.1 1.2 1 0 0 1 1 1 1 DDRGK domain tRNA_NucTran2_2 PF13735.6 ORF21253 - 0.0042 17.1 0.3 0.0059 16.6 0.3 1.1 1 0 0 1 1 1 1 tRNA nucleotidyltransferase domain 2 putative NAPRTase_N PF17767.1 ORF21253 - 0.08 13.3 1.7 0.25 11.7 0.2 2.2 2 1 1 3 3 3 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABC_tran PF00005.27 ORF21240 - 2.1e-10 41.2 1.5 2.2e-10 41.2 0.0 1.7 3 0 0 3 3 3 1 ABC transporter SMC_N PF02463.19 ORF21240 - 4.2e-05 23.1 0.3 5.3e-05 22.8 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain CsoSCA PF08936.10 ORF21240 - 0.029 13.0 0.0 0.034 12.8 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase ELL PF10390.9 ORF21240 - 0.074 12.5 0.1 0.12 11.9 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase II elongation factor ELL AviRa PF11599.8 ORF19482 - 0.081 12.4 0.1 0.1 12.0 0.1 1.2 1 0 0 1 1 1 0 RRNA methyltransferase AviRa MAPEG PF01124.18 ORF18338 - 6.7e-19 68.1 0.2 7.9e-19 67.8 0.2 1.1 1 0 0 1 1 1 1 MAPEG family OAD_gamma PF04277.13 ORF17400 - 0.0012 19.4 0.4 0.0032 18.0 0.4 1.8 1 1 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain DUF1189 PF06691.11 ORF17400 - 0.0042 16.7 0.0 0.0044 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1189) DUF4834 PF16118.5 ORF17400 - 0.0059 17.5 0.9 0.014 16.4 0.9 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4834) CD99L2 PF12301.8 ORF17400 - 0.0063 16.8 0.9 0.0063 16.8 0.9 2.1 1 1 0 2 2 2 1 CD99 antigen like protein 2 KdgT PF03812.13 ORF17400 - 0.053 12.8 0.0 0.07 12.4 0.0 1.1 1 0 0 1 1 1 0 2-keto-3-deoxygluconate permease SARAF PF06682.12 ORF17400 - 0.08 12.6 0.1 0.097 12.3 0.1 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Plasmodium_Vir PF05795.11 ORF17400 - 1.4 8.3 6.7 4.8 6.5 0.3 2.0 1 1 1 2 2 2 0 Plasmodium vivax Vir protein Lebercilin PF15619.6 ORF16719 - 0.00021 21.0 5.6 0.00027 20.6 5.6 1.1 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF4854 PF16146.5 ORF16719 - 0.00092 19.5 4.2 0.0016 18.8 4.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4854) DASH_Dam1 PF08653.10 ORF16719 - 0.0023 17.7 2.8 1.1 9.1 0.1 2.4 2 0 0 2 2 2 2 DASH complex subunit Dam1 Matrilin_ccoil PF10393.9 ORF16719 - 0.041 13.7 5.2 0.091 12.6 0.2 2.8 3 0 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin Cob_adeno_trans PF01923.18 ORF16719 - 0.11 12.7 0.3 0.14 12.3 0.3 1.1 1 0 0 1 1 1 0 Cobalamin adenosyltransferase CCDC-167 PF15188.6 ORF16719 - 0.12 12.7 4.2 0.92 9.9 4.2 2.1 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 FlaC_arch PF05377.11 ORF16719 - 0.12 12.8 3.3 0.5 10.8 0.6 2.5 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) V-SNARE PF05008.15 ORF16719 - 0.36 11.2 7.4 0.36 11.2 5.3 1.9 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus FapA PF03961.13 ORF16719 - 0.56 8.7 5.3 0.68 8.5 5.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A GrpE PF01025.19 ORF16719 - 0.63 9.7 8.2 0.72 9.5 4.4 2.0 1 1 0 2 2 2 0 GrpE Fib_alpha PF08702.10 ORF16719 - 1.8 8.7 9.2 2.9 8.1 4.8 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Strumpellin PF10266.9 ORF15319 - 3.7e-36 124.3 11.4 4.1e-36 124.2 11.4 1.0 1 0 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin OKR_DC_1_N PF03709.15 ORF15319 - 0.01 16.1 0.5 0.023 14.9 0.2 1.7 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain ABC_tran PF00005.27 ORF1432 - 1.4e-10 41.8 0.0 2.2e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF1432 - 0.00015 21.3 0.3 0.00017 21.1 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain CsoSCA PF08936.10 ORF1432 - 0.011 14.4 0.0 0.013 14.2 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase ELL PF10390.9 ORF1432 - 0.082 12.4 0.1 0.12 11.9 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase II elongation factor ELL OAD_gamma PF04277.13 ORF13816 - 0.0012 19.4 0.4 0.0032 18.0 0.4 1.8 1 1 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain DUF1189 PF06691.11 ORF13816 - 0.0042 16.7 0.0 0.0044 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1189) DUF4834 PF16118.5 ORF13816 - 0.0059 17.5 0.9 0.014 16.4 0.9 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4834) CD99L2 PF12301.8 ORF13816 - 0.0063 16.8 0.9 0.0063 16.8 0.9 2.1 1 1 0 2 2 2 1 CD99 antigen like protein 2 KdgT PF03812.13 ORF13816 - 0.053 12.8 0.0 0.07 12.4 0.0 1.1 1 0 0 1 1 1 0 2-keto-3-deoxygluconate permease SARAF PF06682.12 ORF13816 - 0.08 12.6 0.1 0.097 12.3 0.1 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Plasmodium_Vir PF05795.11 ORF13816 - 1.4 8.3 6.7 4.8 6.5 0.3 2.0 1 1 1 2 2 2 0 Plasmodium vivax Vir protein Megourin PF17560.2 ORF12701 - 4.5 7.6 6.7 22 5.4 6.7 1.9 1 1 0 1 1 1 0 Aphid Megourins Neur_chan_memb PF02932.16 ORF11836 - 6.1 6.8 10.0 7.5 6.5 10.0 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4515 PF14988.6 ORF11817 - 0.00016 21.5 17.4 0.00019 21.3 17.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4515) Exonuc_VII_L PF02601.15 ORF11817 - 0.014 15.0 4.2 0.016 14.8 4.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit TipAS PF07739.13 ORF11817 - 0.028 15.0 6.0 0.028 15.0 5.0 1.5 1 1 0 1 1 1 0 TipAS antibiotic-recognition domain AnfG_VnfG PF03139.15 ORF11817 - 0.039 14.1 1.4 0.039 14.1 1.4 1.9 2 0 0 2 2 2 0 Vanadium/alternative nitrogenase delta subunit SOAR PF16533.5 ORF11817 - 0.071 13.1 5.1 0.043 13.8 3.0 1.6 1 1 1 2 2 2 0 STIM1 Orai1-activating region TMPIT PF07851.13 ORF11817 - 0.2 10.9 4.8 0.24 10.6 4.8 1.2 1 0 0 1 1 1 0 TMPIT-like protein HMG_box_5 PF14887.6 ORF11817 - 0.21 11.6 2.6 0.16 11.9 0.9 1.7 1 1 0 2 2 2 0 HMG (high mobility group) box 5 DUF4407 PF14362.6 ORF11817 - 0.25 10.7 4.4 0.31 10.4 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Lectin_N PF03954.14 ORF11817 - 0.53 10.0 3.9 0.4 10.4 2.0 1.7 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain ATG16 PF08614.11 ORF11571 - 2.7e-06 27.8 14.2 3.6e-06 27.4 14.2 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF4201 PF13870.6 ORF11571 - 0.00034 20.4 6.5 0.00048 19.9 6.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) KASH_CCD PF14662.6 ORF11571 - 0.0042 16.9 7.7 0.005 16.7 7.7 1.1 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DUF641 PF04859.12 ORF11571 - 0.0057 17.0 9.6 0.02 15.3 2.4 2.2 1 1 1 2 2 2 1 Plant protein of unknown function (DUF641) DUF4005 PF13178.6 ORF11571 - 0.012 16.2 1.9 0.012 16.2 1.9 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF4005) Csm1_N PF18504.1 ORF11571 - 0.012 15.9 8.6 0.57 10.6 2.1 2.5 1 1 1 2 2 2 0 Csm1 N-terminal domain SpecificRecomb PF10136.9 ORF11571 - 0.02 13.3 2.4 0.023 13.0 2.4 1.0 1 0 0 1 1 1 0 Site-specific recombinase DASH_Spc34 PF08657.10 ORF11571 - 0.024 14.4 5.0 0.03 14.1 5.0 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 FapA PF03961.13 ORF11571 - 0.03 13.0 2.9 0.033 12.8 2.9 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A PKcGMP_CC PF16808.5 ORF11571 - 0.035 14.0 8.9 0.13 12.1 2.4 2.5 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase FAM76 PF16046.5 ORF11571 - 0.037 13.4 7.6 0.049 13.0 7.6 1.3 1 1 0 1 1 1 0 FAM76 protein Fib_alpha PF08702.10 ORF11571 - 0.039 14.1 3.6 0.2 11.9 3.1 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 ORF11571 - 0.041 12.8 8.2 0.054 12.4 8.2 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF812 PF05667.11 ORF11571 - 0.057 12.3 7.7 0.07 12.0 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF4200 PF13863.6 ORF11571 - 0.077 13.4 11.4 0.32 11.4 11.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Sec2p PF06428.11 ORF11571 - 0.093 12.7 9.1 0.25 11.3 1.4 2.3 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p DUF745 PF05335.13 ORF11571 - 0.1 12.3 6.1 0.19 11.5 6.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF745) Macoilin PF09726.9 ORF11571 - 0.1 11.1 5.3 0.12 10.9 5.3 1.0 1 0 0 1 1 1 0 Macoilin family IFT57 PF10498.9 ORF11571 - 0.11 11.5 4.5 0.13 11.2 4.5 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Seryl_tRNA_N PF02403.22 ORF11571 - 0.14 12.4 6.0 0.28 11.4 6.0 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain CENP-K PF11802.8 ORF11571 - 0.18 11.3 5.0 0.23 11.0 5.0 1.2 1 0 0 1 1 1 0 Centromere-associated protein K Draxin PF15550.6 ORF11571 - 0.19 11.6 5.9 0.23 11.3 5.9 1.0 1 0 0 1 1 1 0 Draxin HAUS-augmin3 PF14932.6 ORF11571 - 0.23 11.0 8.6 0.3 10.6 8.6 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 TMF_DNA_bd PF12329.8 ORF11571 - 0.25 11.4 10.5 2.5 8.1 6.9 2.5 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Atg14 PF10186.9 ORF11571 - 0.31 10.1 10.1 0.37 9.8 10.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 OmpH PF03938.14 ORF11571 - 0.35 11.2 8.7 0.071 13.4 5.5 1.5 2 0 0 2 2 1 0 Outer membrane protein (OmpH-like) DUF932 PF06067.11 ORF11571 - 0.48 10.1 4.8 0.13 12.0 1.6 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF932) UPF0242 PF06785.11 ORF11571 - 0.49 10.5 10.7 3.4 7.7 10.7 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF11571 - 0.63 9.4 5.2 0.82 9.0 5.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 ORF11571 - 0.77 8.9 2.6 0.95 8.7 2.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein Prefoldin_2 PF01920.20 ORF11571 - 2.1 8.3 8.3 4.6 7.2 1.2 2.3 1 1 1 2 2 2 0 Prefoldin subunit YabA PF06156.13 ORF11571 - 2.5 8.8 6.6 1.3 9.7 4.0 1.9 2 1 0 2 2 1 0 Initiation control protein YabA HIP1_clath_bdg PF16515.5 ORF11571 - 2.7 8.7 14.4 2.4 8.8 5.5 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Spc24 PF08286.11 ORF11571 - 4.8 7.5 7.4 17 5.7 5.9 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Cep57_MT_bd PF06657.13 ORF11571 - 5.7 7.5 11.3 0.53 10.8 6.5 1.8 2 1 0 2 2 1 0 Centrosome microtubule-binding domain of Cep57 DUF5082 PF16888.5 ORF111870 - 0.0056 16.9 4.8 0.0056 16.9 4.8 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF5082) FDX-ACB PF03147.14 ORF111870 - 0.021 15.2 1.4 0.035 14.5 0.8 1.6 1 1 1 2 2 2 0 Ferredoxin-fold anticodon binding domain Exonuc_VII_L PF02601.15 ORF111870 - 0.045 13.3 9.3 0.053 13.1 9.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit FlaC_arch PF05377.11 ORF111870 - 0.087 13.2 1.3 0.087 13.2 1.3 3.0 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Apolipoprotein PF01442.18 ORF111870 - 0.1 12.5 7.2 0.31 10.9 7.0 1.7 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Fib_alpha PF08702.10 ORF111870 - 0.12 12.5 11.7 0.089 13.0 9.6 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF1640 PF07798.11 ORF111870 - 0.22 11.6 12.3 0.33 11.0 12.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) DUF745 PF05335.13 ORF111870 - 0.49 10.1 5.2 0.44 10.2 3.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 ORF111870 - 1.1 9.4 7.9 4.4 7.4 6.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) SlyX PF04102.12 ORF111870 - 1.3 9.7 8.8 1.5 9.5 4.6 2.7 2 1 1 3 3 3 0 SlyX Cache_3-Cache_2 PF17201.4 ORF111870 - 5.4 6.2 7.5 12 5.1 7.4 1.6 1 1 0 1 1 1 0 Cache 3/Cache 2 fusion domain DUF641 PF04859.12 ORF111870 - 6.7 7.1 9.8 2.2 8.6 4.3 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) BTB PF00651.31 ORF110621 - 0.00011 22.4 0.0 0.00014 22.1 0.0 1.2 1 0 0 1 1 1 1 BTB/POZ domain DUF4248 PF14053.6 ORF110621 - 0.13 12.3 0.2 0.45 10.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4248) GP11 PF08677.10 ORF110621 - 0.22 11.0 0.0 0.27 10.7 0.0 1.2 1 0 0 1 1 1 0 GP11 baseplate wedge protein MFS_1 PF07690.16 ORF110312 - 4.8e-08 32.3 6.2 5.4e-08 32.2 6.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Pkinase PF00069.25 ORF110077 - 8.7e-20 71.2 0.9 1.1e-19 70.8 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF110077 - 1.5e-05 24.5 0.0 2.5e-05 23.7 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF110077 - 0.0025 17.2 0.0 0.0041 16.5 0.0 1.3 1 0 0 1 1 1 1 Kinase-like GIY-YIG PF01541.24 ORF110077 - 0.012 15.9 0.6 0.02 15.2 0.6 1.3 1 0 0 1 1 1 0 GIY-YIG catalytic domain WD40 PF00400.32 ORF109901 - 1.4e-08 35.2 0.0 0.01 16.6 0.0 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF1513 PF07433.11 ORF109901 - 0.0059 15.7 0.0 0.0095 15.0 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1513) ANAPC4_WD40 PF12894.7 ORF109901 - 0.026 14.8 0.0 5.8 7.3 0.0 2.3 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF109901 - 0.032 14.2 0.0 1.6 8.8 0.0 2.3 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat Copine PF07002.16 ORF109769 - 7.5e-44 149.8 0.3 8.2e-44 149.6 0.3 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF109769 - 9.7e-08 32.4 0.1 1.3e-07 31.9 0.1 1.2 1 1 0 1 1 1 1 vWA found in TerF C terminus VWA PF00092.28 ORF109769 - 0.006 16.9 0.0 0.01 16.1 0.0 1.3 1 1 0 1 1 1 1 von Willebrand factor type A domain NOG1_N PF17835.1 ORF109307 - 0.018 15.0 1.2 0.023 14.7 1.1 1.3 1 1 0 1 1 1 0 NOG1 N-terminal helical domain BDM PF10684.9 ORF109307 - 0.16 12.4 0.4 7.8 6.9 0.1 2.4 1 1 1 2 2 2 0 Putative biofilm-dependent modulation protein YabA PF06156.13 ORF109307 - 0.9 10.2 7.5 4.1 8.1 7.5 2.1 1 1 0 1 1 1 0 Initiation control protein YabA CENP-H PF05837.12 ORF109307 - 8.2 6.9 12.7 4.9 7.6 10.4 1.8 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Rsa3 PF14615.6 ORF108505 - 0.18 11.4 0.0 1.5 8.5 0.0 2.2 2 0 0 2 2 2 0 Ribosome-assembly protein 3 DUF454 PF04304.13 ORF108232 - 0.042 13.9 1.9 0.1 12.7 1.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF454) Toxin_18 PF08087.11 ORF107536 - 0.017 15.1 2.8 0.062 13.3 1.3 2.7 2 0 0 2 2 2 0 Conotoxin O-superfamily DUF1480 PF07351.13 ORF107536 - 0.033 14.4 0.5 0.47 10.8 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1480) Imm53 PF15580.6 ORF107004 - 0.06 13.1 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 53 Ribosomal_L29 PF00831.23 ORF106533 - 0.11 12.4 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Ribosomal L29 protein CpeT PF06206.11 ORF106319 - 0.14 12.1 0.3 0.21 11.5 0.3 1.3 1 1 0 1 1 1 0 CpeT/CpcT family (DUF1001) His_Phos_1 PF00300.22 ORF105820 - 3.6e-10 39.9 0.0 3.4e-09 36.7 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DUF4972 PF16342.5 ORF105820 - 0.061 13.0 0.1 0.09 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) Shisa PF13908.6 ORF10569 - 0.00019 21.8 0.1 0.00024 21.4 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator CD34_antigen PF06365.12 ORF10569 - 0.0031 17.1 0.0 0.0041 16.7 0.0 1.1 1 0 0 1 1 1 1 CD34/Podocalyxin family VSP PF03302.13 ORF10569 - 0.058 12.2 0.5 0.095 11.5 0.5 1.3 1 0 0 1 1 1 0 Giardia variant-specific surface protein DUF4834 PF16118.5 ORF10569 - 0.094 13.7 1.5 0.37 11.8 1.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) COX14 PF14880.6 ORF10569 - 0.17 11.7 0.2 0.25 11.2 0.2 1.2 1 0 0 1 1 1 0 Cytochrome oxidase c assembly DUF4690 PF15756.5 ORF10569 - 0.66 10.6 3.9 0.68 10.6 0.2 2.2 2 1 0 2 2 2 0 Small Novel Rich in Cartilage Orf78 PF06024.12 ORF10569 - 3.4 8.0 6.9 0.61 10.4 0.4 2.1 1 1 0 2 2 2 0 Orf78 (ac78) ANTH PF07651.16 ORF104991 - 4e-07 29.3 0.6 4.7e-07 29.1 0.6 1.1 1 0 0 1 1 1 1 ANTH domain MyTH4 PF00784.17 ORF104991 - 0.019 15.5 0.1 0.028 14.9 0.1 1.4 1 0 0 1 1 1 0 MyTH4 domain Frankia_peptide PF14407.6 ORF104317 - 5.7e-05 23.0 1.0 0.0063 16.5 0.7 2.4 2 0 0 2 2 2 2 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. Shisa PF13908.6 ORF103557 - 0.00019 21.8 0.1 0.00024 21.4 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator CD34_antigen PF06365.12 ORF103557 - 0.0031 17.1 0.0 0.0041 16.7 0.0 1.1 1 0 0 1 1 1 1 CD34/Podocalyxin family VSP PF03302.13 ORF103557 - 0.058 12.2 0.5 0.095 11.5 0.5 1.3 1 0 0 1 1 1 0 Giardia variant-specific surface protein DUF4834 PF16118.5 ORF103557 - 0.094 13.7 1.5 0.37 11.8 1.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) COX14 PF14880.6 ORF103557 - 0.17 11.7 0.2 0.25 11.2 0.2 1.2 1 0 0 1 1 1 0 Cytochrome oxidase c assembly DUF4690 PF15756.5 ORF103557 - 0.66 10.6 3.9 0.68 10.6 0.2 2.2 2 1 0 2 2 2 0 Small Novel Rich in Cartilage Orf78 PF06024.12 ORF103557 - 3.4 8.0 6.9 0.61 10.4 0.4 2.1 1 1 0 2 2 2 0 Orf78 (ac78) Histone PF00125.24 ORF102520 - 2.3e-53 180.1 3.2 2.5e-53 179.9 3.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF102520 - 1.4e-05 25.7 1.9 1.8e-05 25.4 1.9 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF102520 - 0.00017 21.9 0.0 0.00027 21.3 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF102520 - 0.00035 20.7 0.1 0.00068 19.7 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF102520 - 0.0022 18.3 0.1 0.0049 17.1 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF102520 - 0.057 13.5 0.0 0.089 12.9 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit DUF2545 PF10810.8 ORF102359 - 0.021 15.0 0.5 0.031 14.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2545) adh_short PF00106.25 ORF101895 - 5.8e-13 48.7 0.0 6.9e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF101895 - 0.0078 15.8 0.0 0.0094 15.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF101895 - 0.099 12.6 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 KR domain FXMRP1_C_core PF12235.8 NODE_45557_length_430_cov_1.025316_g37779_i0reverse_frame_1 - 0.11 13.1 2.5 0.16 12.7 2.5 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal Pkinase PF00069.25 NODE_45551_length_430_cov_1.898734_g37773_i0forward_frame_1 - 0.00094 18.6 0.0 0.0013 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 NODE_45551_length_430_cov_1.898734_g37773_i0forward_frame_1 - 0.054 12.9 0.0 0.077 12.3 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Sulfatase PF00884.23 NODE_45545_length_430_cov_2.427848_g37767_i0forward_frame_1 - 0.0031 17.0 0.3 0.0098 15.3 0.0 1.8 2 0 0 2 2 2 1 Sulfatase RNA_helicase PF00910.22 NODE_45545_length_430_cov_2.427848_g37767_i0forward_frame_1 - 0.13 12.6 0.4 0.26 11.7 0.3 1.5 2 0 0 2 2 2 0 RNA helicase DnaJ PF00226.31 NODE_45537_length_430_cov_3.587342_g37759_i0reverse_frame_1 - 9e-18 64.2 2.7 1.5e-17 63.4 2.7 1.4 1 0 0 1 1 1 1 DnaJ domain zf-RING_6 PF14835.6 NODE_45530_length_430_cov_48.382278_g37752_i0forward_frame_1 - 0.08 12.8 4.0 0.13 12.1 4.0 1.4 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Flavodoxin_1 PF00258.25 NODE_45526_length_430_cov_68.329114_g37748_i0forward_frame_1 - 6.6e-05 23.1 0.0 0.00094 19.4 0.0 2.0 1 1 1 2 2 2 1 Flavodoxin Flavodoxin_5 PF12724.7 NODE_45526_length_430_cov_68.329114_g37748_i0forward_frame_1 - 0.018 15.3 0.0 0.027 14.7 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain FMN_red PF03358.15 NODE_45526_length_430_cov_68.329114_g37748_i0forward_frame_1 - 0.051 13.3 0.0 0.068 12.9 0.0 1.2 1 0 0 1 1 1 0 NADPH-dependent FMN reductase LysM PF01476.20 NODE_45476_length_431_cov_2.343434_g37702_i0reverse_frame_1 - 0.15 12.2 0.0 0.35 11.0 0.0 1.6 1 0 0 1 1 1 0 LysM domain DUF615 PF04751.14 NODE_45470_length_431_cov_2.939394_g37696_i0reverse_frame_1 - 0.045 13.7 0.3 0.057 13.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF615) MAP70 PF07058.11 NODE_45470_length_431_cov_2.939394_g37696_i0forward_frame_1 - 0.14 10.9 2.3 0.16 10.7 2.3 1.0 1 0 0 1 1 1 0 Microtubule-associated protein 70 DUF2618 PF10940.8 NODE_45469_length_431_cov_2.954545_g37695_i0reverse_frame_1 - 0.053 13.3 3.4 6.6 6.6 0.7 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) FKBP_C PF00254.28 NODE_45468_length_431_cov_3.075758_g37694_i0forward_frame_1 - 6.4e-15 55.3 0.0 9.4e-15 54.7 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase UxuA PF03786.13 NODE_45466_length_431_cov_3.131313_g37692_i0forward_frame_1 - 2.1e-50 171.5 0.0 2.3e-50 171.4 0.0 1.0 1 0 0 1 1 1 1 D-mannonate dehydratase (UxuA) Catalase-rel PF06628.12 NODE_45466_length_431_cov_3.131313_g37692_i0forward_frame_1 - 0.00017 21.7 0.0 0.00047 20.3 0.0 1.7 1 1 1 2 2 2 1 Catalase-related immune-responsive Aldo_ket_red PF00248.21 NODE_45462_length_431_cov_4.558081_g37688_i0forward_frame_1 - 8.2e-33 113.8 0.1 8.9e-33 113.7 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family GP46 PF07409.12 NODE_45462_length_431_cov_4.558081_g37688_i0forward_frame_1 - 0.0047 16.7 0.1 0.0064 16.2 0.1 1.2 1 0 0 1 1 1 1 Phage protein GP46 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks155.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks155.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks155.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks155.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2666 PF10869.8 NODE_45460_length_431_cov_64.012626_g37686_i0forward_frame_1 - 0.022 15.0 0.6 0.034 14.3 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF2457 PF10446.9 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_1 - 9.4 5.2 8.9 9.7 5.2 8.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Aldo_ket_red PF00248.21 NODE_45445_length_431_cov_98.222222_g37671_i0reverse_frame_1 - 3.9e-11 42.7 0.0 4.3e-11 42.6 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Rrn6 PF10214.9 NODE_45439_length_431_cov_156.207071_g37665_i0reverse_frame_1 - 0.046 12.2 0.6 0.05 12.1 0.6 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF5572 PF17733.1 NODE_45439_length_431_cov_156.207071_g37665_i0forward_frame_1 - 0.15 11.9 0.0 0.3 11.0 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5572) SCRL PF06876.12 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_1 - 0.092 12.9 0.6 1.9 8.7 0.2 2.3 1 1 1 2 2 2 0 Plant self-incompatibility response (SCRL) protein FTR_C PF02741.15 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_1 - 5.4e-05 23.2 0.0 3.1 7.8 0.0 3.8 1 1 3 4 4 4 2 FTR, proximal lobe DiS_P_DiS PF06750.13 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_1 - 0.0088 16.1 4.6 49 4.1 0.0 4.0 4 0 0 4 4 4 3 Bacterial Peptidase A24 N-terminal domain Toxin_38 PF14866.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_1 - 0.04 14.2 13.0 23 5.3 0.2 4.4 4 0 0 4 4 4 0 Potassium channel toxin SCIMP PF15050.6 NODE_45429_length_431_cov_1507.234848_g37655_i0reverse_frame_1 - 0.006 17.1 0.0 0.0064 16.9 0.0 1.2 1 0 0 1 1 1 1 SCIMP protein DUF4834 PF16118.5 NODE_45429_length_431_cov_1507.234848_g37655_i0reverse_frame_1 - 0.026 15.5 1.1 0.1 13.6 1.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) YMF19 PF02326.15 NODE_45429_length_431_cov_1507.234848_g37655_i0reverse_frame_1 - 0.057 14.2 0.0 0.11 13.3 0.0 1.5 1 0 0 1 1 1 0 Plant ATP synthase F0 WBP-1 PF11669.8 NODE_45429_length_431_cov_1507.234848_g37655_i0reverse_frame_1 - 0.089 13.4 0.2 0.26 11.9 0.1 1.9 1 1 1 2 2 2 0 WW domain-binding protein 1 AdoHcyase PF05221.17 NODE_45427_length_431_cov_2640.800505_g36701_i1reverse_frame_1 - 9.5e-23 80.8 0.1 1.2e-22 80.4 0.1 1.2 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase SRP14 PF02290.15 NODE_45424_length_432_cov_1.259446_g37651_i0reverse_frame_1 - 0.026 14.9 2.0 0.096 13.1 0.2 2.1 2 0 0 2 2 2 0 Signal recognition particle 14kD protein Mrr_cat_2 PF13156.6 NODE_45424_length_432_cov_1.259446_g37651_i0reverse_frame_1 - 0.16 11.9 3.0 0.24 11.3 1.8 1.8 1 1 1 2 2 2 0 Restriction endonuclease SPOB_a PF14689.6 NODE_45418_length_432_cov_1.919395_g37645_i0forward_frame_1 - 0.061 13.0 0.1 7.1 6.4 0.0 2.4 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain EIF_2_alpha PF07541.12 NODE_45418_length_432_cov_1.919395_g37645_i0forward_frame_1 - 0.1 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit CBP_BcsS PF17036.5 NODE_45416_length_432_cov_2.060453_g37643_i0forward_frame_1 - 0.14 12.1 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsS Beach PF02138.18 NODE_45409_length_432_cov_2.843829_g37636_i0reverse_frame_1 - 7.2e-26 91.2 0.2 9.9e-26 90.7 0.2 1.2 1 0 0 1 1 1 1 Beige/BEACH domain DUF4238 PF14022.6 NODE_45409_length_432_cov_2.843829_g37636_i0reverse_frame_1 - 0.034 13.7 0.2 0.04 13.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4238) MapZ_EC1 PF18041.1 NODE_45409_length_432_cov_2.843829_g37636_i0reverse_frame_1 - 1 9.6 4.1 2.4 8.4 1.1 2.0 2 0 0 2 2 2 0 MapZ extracellular domain 1 PfkB PF00294.24 NODE_45408_length_432_cov_3.005038_g37635_i0forward_frame_1 - 5.9e-18 65.2 0.1 7.2e-18 64.9 0.1 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Mad3_BUB1_I_2 PF17014.5 NODE_45395_length_432_cov_71.803526_g37622_i0forward_frame_1 - 0.065 13.4 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein Sif PF06767.11 NODE_45391_length_432_cov_77.231738_g37618_i0reverse_frame_1 - 0.057 12.4 0.4 0.068 12.1 0.4 1.1 1 0 0 1 1 1 0 Sif protein DUF3332 PF11810.8 NODE_45391_length_432_cov_77.231738_g37618_i0reverse_frame_1 - 0.071 12.8 1.6 0.094 12.4 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) XRN_N PF03159.18 NODE_45388_length_432_cov_86.259446_g37615_i0reverse_frame_1 - 3.9e-41 141.1 0.0 4.4e-41 140.9 0.0 1.0 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus RCC1_2 PF13540.6 NODE_45374_length_432_cov_162.952141_g37601_i0reverse_frame_1 - 0.065 13.1 0.1 0.24 11.3 0.0 2.0 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat PIR PF00399.19 NODE_45374_length_432_cov_162.952141_g37601_i0reverse_frame_1 - 0.52 10.0 3.9 7.3 6.3 0.3 2.5 2 0 0 2 2 2 0 Yeast PIR protein repeat MAP1B_neuraxin PF00414.17 NODE_45367_length_432_cov_926.891688_g37594_i0reverse_frame_1 - 0.38 10.4 2.3 0.61 9.7 2.3 1.3 1 0 0 1 1 1 0 Neuraxin and MAP1B repeat Endotoxin_M PF00555.19 NODE_45364_length_432_cov_6732.755668_g37593_i0reverse_frame_1 - 0.029 14.4 0.8 0.034 14.2 0.8 1.1 1 0 0 1 1 1 0 delta endotoxin DUF1889 PF08986.10 NODE_45363_length_432_cov_9455.090680_g37592_i0forward_frame_1 - 0.16 12.4 0.0 0.35 11.3 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1889) Nucleopor_Nup85 PF07575.13 NODE_45357_length_433_cov_1.758794_g37586_i0reverse_frame_2 - 0.1 11.2 1.2 0.12 10.9 1.2 1.0 1 0 0 1 1 1 0 Nup85 Nucleoporin Phage_SSB PF16773.5 NODE_45356_length_433_cov_2.133166_g37585_i0forward_frame_3 - 2.7 8.1 9.4 0.15 12.2 2.5 2.3 1 1 1 2 2 2 0 Lactococcus phage single-stranded DNA binding protein V_ATPase_I PF01496.19 NODE_45355_length_433_cov_2.371859_g37584_i0reverse_frame_2 - 1.8e-59 201.5 3.5 2e-59 201.4 3.5 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family zf-RING_2 PF13639.6 NODE_45351_length_433_cov_2.623116_g37580_i0forward_frame_3 - 0.00014 22.1 1.6 0.00022 21.5 1.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_45351_length_433_cov_2.623116_g37580_i0forward_frame_3 - 0.0018 18.0 1.3 0.0018 18.0 1.3 2.7 3 0 0 3 3 3 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_45351_length_433_cov_2.623116_g37580_i0forward_frame_3 - 0.0081 16.2 0.9 0.015 15.3 0.9 1.5 1 0 0 1 1 1 1 RING-type zinc-finger DcpS PF05652.12 NODE_45351_length_433_cov_2.623116_g37580_i0forward_frame_3 - 0.0096 16.8 0.0 0.014 16.3 0.0 1.3 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme (DcpS) N-terminal zf-C3HC4 PF00097.25 NODE_45351_length_433_cov_2.623116_g37580_i0forward_frame_3 - 0.022 14.6 2.1 0.038 13.9 2.1 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) MAP7 PF05672.11 NODE_45351_length_433_cov_2.623116_g37580_i0forward_frame_3 - 0.12 12.1 5.4 0.16 11.7 5.4 1.2 1 0 0 1 1 1 0 MAP7 (E-MAP-115) family zf-rbx1 PF12678.7 NODE_45351_length_433_cov_2.623116_g37580_i0forward_frame_3 - 0.24 11.7 4.1 0.59 10.5 4.1 1.6 1 1 0 1 1 1 0 RING-H2 zinc finger domain Gly_rich PF12810.7 NODE_45348_length_433_cov_2.814070_g37577_i0reverse_frame_2 - 0.12 12.3 0.1 0.2 11.6 0.1 1.3 1 0 0 1 1 1 0 Glycine rich protein Fe-ADH PF00465.19 NODE_45347_length_433_cov_2.922111_g37576_i0forward_frame_3 - 4.1e-53 180.5 2.4 4.5e-53 180.4 2.4 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 NODE_45347_length_433_cov_2.922111_g37576_i0forward_frame_3 - 1.8e-07 31.2 0.7 2.1e-07 30.9 0.7 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase HTH_AraC PF00165.23 NODE_45345_length_433_cov_3.050251_g37574_i0reverse_frame_2 - 4.2e-07 29.9 0.0 7.4e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 NODE_45345_length_433_cov_3.050251_g37574_i0reverse_frame_2 - 0.015 15.2 0.3 0.029 14.3 0.3 1.7 1 1 0 1 1 1 0 AraC-like ligand binding domain HMGL-like PF00682.19 NODE_45341_length_433_cov_3.992462_g37570_i0forward_frame_3 - 6.4e-27 94.8 0.1 7.3e-27 94.6 0.1 1.1 1 0 0 1 1 1 1 HMGL-like YvrJ PF12841.7 NODE_45338_length_433_cov_12.635678_g37567_i0reverse_frame_2 - 0.95 9.0 4.0 10 5.7 0.3 2.4 2 0 0 2 2 2 0 YvrJ protein family DUF478 PF04334.12 NODE_45338_length_433_cov_12.635678_g37567_i0forward_frame_2 - 1.3 9.2 5.8 12 6.0 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF478) TMPIT PF07851.13 NODE_45334_length_433_cov_55.851759_g37563_i0forward_frame_2 - 0.36 10.0 1.3 0.51 9.5 1.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein PhnG PF06754.12 NODE_45330_length_433_cov_69.733668_g37559_i0reverse_frame_3 - 0.057 13.4 0.2 0.065 13.2 0.2 1.1 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG FAM199X PF15814.5 NODE_45330_length_433_cov_69.733668_g37559_i0reverse_frame_3 - 3.1 6.8 7.5 4.1 6.4 7.5 1.2 1 0 0 1 1 1 0 Protein family FAM199X IQ PF00612.27 NODE_45326_length_433_cov_82.831658_g37555_i0reverse_frame_3 - 9.7e-05 21.8 0.6 0.00018 21.0 0.6 1.5 1 0 0 1 1 1 1 IQ calmodulin-binding motif Sporozoite_P67 PF05642.11 NODE_45321_length_433_cov_91.615578_g36850_i1reverse_frame_3 - 0.44 8.6 0.5 0.54 8.3 0.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen GARS_C PF02843.16 NODE_45317_length_433_cov_106.035176_g37547_i0reverse_frame_2 - 0.041 14.2 0.0 0.053 13.8 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, C domain QRPTase_N PF02749.16 NODE_45312_length_433_cov_132.532663_g37542_i0reverse_frame_2 - 0.083 12.9 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, N-terminal domain DUF1908 PF08926.11 NODE_45303_length_433_cov_208.133166_g37534_i0forward_frame_2 - 0.097 11.7 0.6 0.12 11.4 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) RNA_pol_Rpb6 PF01192.22 NODE_45299_length_433_cov_324.685930_g37530_i0reverse_frame_3 - 8e-14 51.3 0.1 1.3e-13 50.6 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb6 DUF348 PF03990.14 NODE_45299_length_433_cov_324.685930_g37530_i0reverse_frame_3 - 0.063 13.0 0.0 0.36 10.6 0.0 2.1 2 0 0 2 2 2 0 G5-linked-Ubiquitin-like domain CXCR4_N PF12109.8 NODE_45299_length_433_cov_324.685930_g37530_i0reverse_frame_3 - 0.13 12.5 1.9 0.33 11.2 1.9 1.8 1 0 0 1 1 1 0 CXCR4 Chemokine receptor N terminal G8 PF10162.9 NODE_45294_length_433_cov_5840.464824_g37525_i0reverse_frame_3 - 0.039 14.0 0.0 0.053 13.6 0.0 1.2 1 0 0 1 1 1 0 G8 domain Cas_Csy2 PF09614.10 NODE_45294_length_433_cov_5840.464824_g37525_i0forward_frame_3 - 0.045 13.1 0.0 0.056 12.8 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy2) DUF1199 PF06712.11 NODE_45290_length_434_cov_2.278195_g37521_i0reverse_frame_3 - 2.6 8.2 8.0 2.7 8.1 2.6 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1199) KGG PF10685.9 NODE_45290_length_434_cov_2.278195_g37521_i0reverse_frame_2 - 0.054 13.8 0.4 0.13 12.6 0.4 1.6 1 0 0 1 1 1 0 Stress-induced bacterial acidophilic repeat motif DUF5538 PF17692.1 NODE_45290_length_434_cov_2.278195_g37521_i0forward_frame_3 - 0.013 15.6 4.1 0.013 15.6 4.1 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5538) MIF4G PF02854.19 NODE_45279_length_434_cov_25.556391_g37510_i0forward_frame_2 - 0.00016 21.4 0.6 0.00044 20.0 0.6 1.7 1 1 0 1 1 1 1 MIF4G domain Inhibitor_G39P PF11417.8 NODE_45279_length_434_cov_25.556391_g37510_i0forward_frame_2 - 0.16 12.5 1.1 0.36 11.4 0.2 2.0 2 1 0 2 2 2 0 Loader and inhibitor of phage G40P IDEAL PF08858.10 NODE_45278_length_434_cov_30.508772_g37509_i0reverse_frame_2 - 0.095 12.5 0.5 0.23 11.2 0.5 1.7 1 0 0 1 1 1 0 IDEAL domain GWT1 PF06423.12 NODE_45270_length_434_cov_70.002506_g37502_i0reverse_frame_3 - 0.049 13.8 4.3 0.08 13.1 4.3 1.4 1 0 0 1 1 1 0 GWT1 Ank_2 PF12796.7 NODE_45266_length_434_cov_76.015038_g37498_i0reverse_frame_2 - 2.4e-29 101.7 6.4 7e-15 55.4 0.1 2.1 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_45266_length_434_cov_76.015038_g37498_i0reverse_frame_2 - 2.5e-17 63.0 5.8 6.7e-10 39.3 0.6 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_45266_length_434_cov_76.015038_g37498_i0reverse_frame_2 - 1.4e-16 60.3 5.5 4.5e-07 30.0 0.1 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_45266_length_434_cov_76.015038_g37498_i0reverse_frame_2 - 2.1e-15 55.3 4.0 1.4e-05 25.1 0.1 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 NODE_45266_length_434_cov_76.015038_g37498_i0reverse_frame_2 - 5.7e-14 51.8 4.9 6.1e-06 26.4 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeat PTH2 PF01981.16 NODE_45266_length_434_cov_76.015038_g37498_i0reverse_frame_2 - 0.097 13.0 0.2 0.13 12.6 0.2 1.3 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase PTH2 Phage_DNA_bind PF02303.17 NODE_45259_length_434_cov_89.067669_g37491_i0reverse_frame_2 - 0.057 13.7 0.1 0.098 12.9 0.1 1.4 1 0 0 1 1 1 0 Helix-destabilising protein DUF3439 PF11921.8 NODE_45252_length_434_cov_135.709273_g37484_i0forward_frame_3 - 0.46 10.5 4.5 0.39 10.7 0.2 2.4 1 1 2 3 3 3 0 Domain of unknown function (DUF3439) Phe_ZIP PF08916.11 NODE_45252_length_434_cov_135.709273_g37484_i0forward_frame_2 - 1.1 10.1 9.1 24 5.7 0.3 3.1 2 1 1 3 3 3 0 Phenylalanine zipper EcpB_C PF18649.1 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 0.12 12.4 1.3 0.16 12.0 0.1 1.9 2 0 0 2 2 2 0 EcpB C-terminal domain DUF913 PF06025.12 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 0.63 8.9 8.6 0.72 8.8 8.6 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF2151 PF10221.9 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 2 6.9 16.2 2.2 6.7 16.2 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator Neur_chan_memb PF02932.16 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 2.8 7.9 11.8 3.1 7.8 11.8 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region FAM60A PF15396.6 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 7.3 6.5 16.0 11 6.0 16.0 1.4 1 0 0 1 1 1 0 Protein Family FAM60A RP-C_C PF11800.8 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 8.4 6.4 15.5 11 6.1 15.5 1.2 1 0 0 1 1 1 0 Replication protein C C-terminal region Dzip-like_N PF13815.6 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.0084 16.1 4.0 0.011 15.7 3.2 1.6 1 1 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal DUF4315 PF14193.6 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.013 15.5 1.2 0.013 15.5 1.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4315) Sedlin_N PF04628.13 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.031 14.4 2.6 0.07 13.3 2.6 1.6 1 1 0 1 1 1 0 Sedlin, N-terminal conserved region STAT_alpha PF01017.20 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.11 12.4 9.4 1.1 9.2 2.2 2.1 1 1 1 2 2 2 0 STAT protein, all-alpha domain TMF_DNA_bd PF12329.8 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.33 11.0 12.4 0.061 13.3 4.2 2.4 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding ACI44 PF15270.6 NODE_45245_length_434_cov_205.087719_g37477_i0forward_frame_3 - 0.0017 18.5 1.8 0.003 17.7 1.8 1.4 1 0 0 1 1 1 1 Metallo-carboxypeptidase inhibitor Glu_cys_ligase PF04262.14 NODE_45245_length_434_cov_205.087719_g37477_i0forward_frame_2 - 0.035 12.7 2.3 0.048 12.3 2.3 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase YgaB PF14182.6 NODE_45245_length_434_cov_205.087719_g37477_i0forward_frame_2 - 0.11 12.9 7.7 0.07 13.5 2.7 2.1 1 1 1 2 2 2 0 YgaB-like protein DUF2968 PF11180.8 NODE_45245_length_434_cov_205.087719_g37477_i0forward_frame_2 - 0.13 11.9 5.1 0.18 11.4 5.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) FapA PF03961.13 NODE_45245_length_434_cov_205.087719_g37477_i0forward_frame_2 - 0.24 9.9 3.3 0.3 9.7 3.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4140 PF13600.6 NODE_45245_length_434_cov_205.087719_g37477_i0forward_frame_2 - 0.26 11.7 3.2 5.3 7.5 1.0 2.1 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) ABC_tran_CTD PF16326.5 NODE_45245_length_434_cov_205.087719_g37477_i0forward_frame_2 - 0.46 10.8 5.7 1.2 9.4 1.4 2.2 2 0 0 2 2 2 0 ABC transporter C-terminal domain CCDC-167 PF15188.6 NODE_45245_length_434_cov_205.087719_g37477_i0forward_frame_2 - 1.1 9.7 8.5 3 8.2 0.5 2.3 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF5320 PF17253.2 NODE_45245_length_434_cov_205.087719_g37477_i0forward_frame_2 - 2.4 9.3 4.8 1.5 9.9 0.5 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5320) XPG_I PF00867.18 NODE_45244_length_434_cov_250.927318_g37476_i0reverse_frame_3 - 0.088 13.2 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 XPG I-region Sigma54_activat PF00158.26 NODE_45222_length_435_cov_2.332500_g37455_i0forward_frame_3 - 1.4e-06 28.1 0.0 2e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 NODE_45222_length_435_cov_2.332500_g37455_i0forward_frame_3 - 0.00011 22.3 0.0 0.00017 21.7 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain AP-5_subunit_s1 PF15001.6 NODE_45219_length_435_cov_2.717500_g37452_i0forward_frame_2 - 0.053 13.5 0.1 0.067 13.2 0.1 1.1 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 Baculo_11_kDa PF06143.11 NODE_45216_length_435_cov_2.995000_g37449_i0reverse_frame_3 - 0.074 12.6 3.3 0.14 11.8 3.3 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family DUF4834 PF16118.5 NODE_45216_length_435_cov_2.995000_g37449_i0reverse_frame_3 - 0.34 11.9 1.1 0.47 11.4 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF1540 PF07561.11 NODE_45216_length_435_cov_2.995000_g37449_i0reverse_frame_2 - 0.057 13.7 0.1 0.082 13.2 0.1 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1540) TPR_2 PF07719.17 NODE_45214_length_435_cov_3.007500_g37447_i0reverse_frame_2 - 4.8e-05 23.2 3.0 0.0006 19.7 0.3 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_45214_length_435_cov_3.007500_g37447_i0reverse_frame_2 - 0.00034 20.3 0.5 0.00034 20.3 0.5 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_45214_length_435_cov_3.007500_g37447_i0reverse_frame_2 - 0.014 15.7 0.5 0.076 13.3 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_45214_length_435_cov_3.007500_g37447_i0reverse_frame_2 - 0.12 12.6 4.7 11 6.4 0.8 3.1 2 1 1 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 DUF2369 PF10179.9 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_3 - 0.047 14.1 0.2 0.11 12.9 0.1 1.6 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2369) THOC7 PF05615.13 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 0.095 13.0 19.2 0.03 14.6 10.9 2.1 1 1 1 2 2 2 0 Tho complex subunit 7 DSPc PF00782.20 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 0.13 12.0 3.0 0.14 12.0 1.8 1.7 1 1 1 2 2 2 0 Dual specificity phosphatase, catalytic domain EspB PF05802.11 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 0.35 10.9 5.5 0.19 11.7 2.1 1.8 1 1 1 2 2 2 0 Enterobacterial EspB protein DUF1308 PF07000.11 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 0.58 10.1 5.5 0.43 10.5 3.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1308) Med9 PF07544.13 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 0.59 10.2 15.8 0.04 14.0 9.1 2.0 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 SseC PF04888.12 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 0.93 9.0 5.9 0.44 10.1 3.5 1.5 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family DUF3450 PF11932.8 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 1 8.6 13.9 0.31 10.3 7.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Fzo_mitofusin PF04799.13 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 1.1 8.8 9.5 0.12 12.0 3.2 2.1 2 0 0 2 2 2 0 fzo-like conserved region Ntox1 PF15500.6 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 1.1 9.6 4.2 0.48 10.8 1.1 1.9 2 0 0 2 2 2 0 Putative RNase-like toxin, toxin_1 DUF948 PF06103.11 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 1.3 9.3 7.0 1.3 9.3 2.6 2.3 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) ZapB PF06005.12 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 1.7 9.1 24.0 1.4 9.4 11.2 2.5 2 1 0 2 2 2 0 Cell division protein ZapB Prefoldin PF02996.17 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 4.5 7.2 19.5 0.84 9.6 3.3 3.2 2 2 1 3 3 3 0 Prefoldin subunit Exonuc_VII_L PF02601.15 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 5.2 6.5 9.2 7.5 6.0 9.2 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit ArlS_N PF18719.1 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 5.6 7.2 10.7 0.98 9.6 2.0 2.9 1 1 3 4 4 4 0 ArlS sensor domain Spc7 PF08317.11 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 9 5.1 24.5 2.6 6.8 13.6 1.8 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF2120 PF09893.9 NODE_45212_length_435_cov_3.487500_g37445_i0forward_frame_2 - 9.6 6.3 11.0 1 9.4 5.2 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) SprB PF13573.6 NODE_45208_length_435_cov_11.257500_g37441_i0forward_frame_2 - 1.7 8.5 8.9 2.3 8.1 0.8 3.0 3 0 0 3 3 3 0 SprB repeat Epiglycanin_C PF14654.6 NODE_45202_length_435_cov_63.657500_g37435_i0forward_frame_2 - 0.034 14.2 0.3 0.08 13.0 0.1 1.6 1 1 1 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region NUFIP2 PF15293.6 NODE_45200_length_435_cov_65.387500_g37433_i0reverse_frame_2 - 0.19 10.6 0.2 0.25 10.2 0.2 1.1 1 0 0 1 1 1 0 Nuclear fragile X mental retardation-interacting protein 2 ADP_ribosyl_GH PF03747.14 NODE_45195_length_435_cov_72.102500_g37428_i0forward_frame_3 - 1.1e-07 31.9 0.0 1.4e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase LCAT PF02450.15 NODE_45191_length_435_cov_79.587500_g37424_i0forward_frame_2 - 0.0099 15.1 0.1 0.012 14.8 0.1 1.2 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase E2F_CC-MB PF16421.5 NODE_45187_length_435_cov_104.370000_g37420_i0reverse_frame_2 - 7.2e-09 35.9 0.0 1.7e-08 34.7 0.0 1.6 1 0 0 1 1 1 1 E2F transcription factor CC-MB domain zf-Tim10_DDP PF02953.15 NODE_45183_length_435_cov_117.132500_g37416_i0reverse_frame_2 - 0.0051 16.4 2.9 0.012 15.2 0.8 2.4 2 1 0 2 2 2 1 Tim10/DDP family zinc finger RCC1_2 PF13540.6 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 1e-23 82.5 5.6 4.4e-10 39.1 0.4 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 1.2e-05 25.9 3.5 0.32 11.7 0.8 4.4 4 1 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat PQQ_3 PF13570.6 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 0.037 14.5 0.8 8.7 7.0 0.0 3.0 3 0 0 3 3 3 0 PQQ-like domain MoaF_C PF17409.2 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 0.17 11.6 0.0 0.67 9.6 0.0 1.9 2 0 0 2 2 2 0 MoaF C-terminal domain Kelch_4 PF13418.6 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 0.23 11.5 2.4 2.8 8.0 0.1 2.6 3 0 0 3 3 3 0 Galactose oxidase, central domain Ribosomal_60s PF00428.19 NODE_45178_length_435_cov_158.395000_g37411_i0forward_frame_3 - 4.8 7.8 5.3 0.68 10.6 0.5 1.8 2 0 0 2 2 2 0 60s Acidic ribosomal protein Importin_rep_5 PF18816.1 NODE_45176_length_435_cov_182.342500_g37409_i0forward_frame_3 - 0.12 12.7 0.0 0.24 11.7 0.0 1.5 1 0 0 1 1 1 0 Importin repeat ABC_membrane PF00664.23 NODE_45176_length_435_cov_182.342500_g37409_i0forward_frame_2 - 1.9e-12 47.4 0.2 3e-12 46.8 0.2 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF2207 PF09972.9 NODE_45176_length_435_cov_182.342500_g37409_i0forward_frame_2 - 0.057 12.2 0.2 0.064 12.0 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Laminin_II PF06009.12 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.0039 17.2 13.5 0.032 14.2 5.3 2.2 1 1 1 2 2 2 1 Laminin Domain II KxDL PF10241.9 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.021 15.1 20.0 0.27 11.5 5.1 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein GAS PF13851.6 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.038 13.3 24.6 0.044 13.1 24.6 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding YojJ PF10372.9 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.23 11.6 10.9 0.88 9.7 1.3 3.0 2 1 1 3 3 3 0 Bacterial membrane-spanning protein N-terminus Syntaxin-6_N PF09177.11 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.32 11.6 10.9 14 6.3 2.5 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Flu_NS2 PF00601.19 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.47 10.8 10.6 0.076 13.3 1.7 2.3 1 1 1 2 2 2 0 Influenza non-structural protein (NS2) DUF262 PF03235.14 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.82 9.8 9.3 0.98 9.5 9.3 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF262 DUF4854 PF16146.5 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.88 9.9 8.3 0.39 11.1 2.0 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4854) DUF3452 PF11934.8 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 1.1 8.8 8.7 2.6 7.6 8.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) SNARE PF05739.19 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 1.4 9.0 5.7 0.35 10.9 0.8 2.4 3 0 0 3 3 3 0 SNARE domain Fib_alpha PF08702.10 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 1.5 9.0 20.1 24 5.1 20.1 2.1 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4407 PF14362.6 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 1.6 8.0 10.4 2.9 7.2 10.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) YvrJ PF12841.7 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 1.6 8.3 3.3 1.9 8.1 1.4 2.1 2 0 0 2 2 2 0 YvrJ protein family DUF668 PF05003.12 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 2 9.0 9.6 0.67 10.5 0.7 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF668) DUF641 PF04859.12 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 3.4 8.0 17.7 0.72 10.2 6.7 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Tweety PF04906.13 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 4 6.0 8.1 0.89 8.2 3.8 1.8 1 1 1 2 2 2 0 Tweety NPV_P10 PF05531.12 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 5.4 7.6 9.1 35 5.0 0.6 3.2 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein Atg14 PF10186.9 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 9.4 5.2 21.1 31 3.5 21.1 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 9.4 5.7 15.4 13 5.2 15.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit ORMDL PF04061.14 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_3 - 0.19 11.6 3.8 0.22 11.3 3.7 1.3 1 1 0 1 1 1 0 ORMDL family SepZ PF06066.11 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_3 - 3.3 8.0 10.0 22 5.3 0.8 2.7 1 1 1 2 2 2 0 SepZ DAOA PF15199.6 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_2 - 0.0027 18.1 0.1 0.82 10.1 0.0 2.2 2 0 0 2 2 2 2 D-amino acid oxidase activator WRC PF08879.10 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_2 - 1.7 8.4 19.3 0.56 9.9 1.0 4.5 4 1 0 4 4 4 0 WRC Tcf25 PF04910.14 NODE_45162_length_435_cov_2066.295000_g37395_i0forward_frame_2 - 0.017 14.2 0.0 0.019 14.0 0.0 1.1 1 0 0 1 1 1 0 Transcriptional repressor TCF25 Tcf25 PF04910.14 NODE_45160_length_435_cov_2533.092500_g37393_i0forward_frame_2 - 0.011 14.9 0.1 0.012 14.7 0.1 1.1 1 0 0 1 1 1 0 Transcriptional repressor TCF25 Sporozoite_P67 PF05642.11 ORF99710 - 1.9 6.4 6.8 2.9 5.9 6.8 1.3 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Smr PF01713.21 ORF99108 - 9.9e-13 48.3 0.0 1.8e-12 47.4 0.0 1.4 1 0 0 1 1 1 1 Smr domain DASH_Spc19 PF08287.11 ORF99108 - 0.018 14.9 4.6 0.023 14.6 4.6 1.3 1 1 0 1 1 1 0 Spc19 HCR PF07111.12 ORF99108 - 0.036 12.1 0.4 0.041 11.9 0.4 1.0 1 0 0 1 1 1 0 Alpha helical coiled-coil rod protein (HCR) DUF3914 PF13053.6 ORF99108 - 0.052 13.9 1.2 0.074 13.4 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3914) BLOC1S3 PF15753.5 ORF99108 - 0.21 11.7 2.9 0.29 11.2 2.9 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 TCTP PF00838.17 ORF99108 - 0.29 11.5 4.0 0.35 11.2 4.0 1.2 1 0 0 1 1 1 0 Translationally controlled tumour protein Trypsin PF00089.26 ORF98656 - 0.16 11.8 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Trypsin TetR_C_31 PF17940.1 ORF98642 - 0.053 13.7 0.0 0.082 13.1 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain RskA PF10099.9 ORF98106 - 0.59 10.4 8.6 0.64 10.3 8.1 1.3 1 1 0 1 1 1 0 Anti-sigma-K factor rskA Arrestin_N PF00339.29 ORF97902 - 1.4e-09 38.2 0.0 1.7e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 ORF97902 - 0.17 11.6 0.4 0.33 10.6 0.1 1.6 1 1 1 2 2 2 0 Arrestin_N terminal like RAG2_PHD PF13341.6 ORF96567 - 0.061 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 RAG2 PHD domain Com_YlbF PF06133.11 ORF94698 - 7.8 7.2 19.0 0.22 12.1 10.8 2.1 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA Ribosomal_L27A PF00828.19 ORF94627 - 1.5e-32 112.9 3.2 2e-32 112.5 3.2 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF94627 - 0.025 14.0 0.2 0.042 13.2 0.2 1.4 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e Ran_BP1 PF00638.18 ORF94266 - 1.6e-37 128.4 0.5 1.9e-37 128.2 0.5 1.0 1 0 0 1 1 1 1 RanBP1 domain WH1 PF00568.23 ORF94266 - 0.054 13.4 1.1 0.32 10.9 1.1 1.9 1 1 0 1 1 1 0 WH1 domain PPV_E2_C PF00511.17 ORF94266 - 0.14 12.3 0.9 0.19 11.9 0.1 1.5 2 0 0 2 2 2 0 E2 (early) protein, C terminal Thioredoxin PF00085.20 ORF93557 - 3.1e-07 30.3 0.0 3.9e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF93557 - 0.22 11.9 0.0 0.41 11.0 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like DUF3341 PF11821.8 ORF92798 - 0.53 9.9 4.3 0.65 9.6 4.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3341) DUF3742 PF12553.8 ORF92798 - 0.7 10.0 0.0 0.7 10.0 0.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3742) DUF5455 PF17537.2 ORF9215 - 0.37 11.2 4.2 0.21 12.0 1.6 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5455) TPR_12 PF13424.6 ORF9167 - 1.3e-14 54.2 20.8 3.3e-08 33.7 4.0 2.5 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF9167 - 1.5e-09 37.4 8.8 0.0011 18.8 0.6 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF9167 - 5e-08 32.4 4.8 0.011 15.7 0.2 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF9167 - 1.9e-06 27.9 10.2 0.0094 16.5 0.8 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF9167 - 7.3e-05 22.6 8.3 0.1 12.8 0.4 3.4 4 0 0 4 4 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF9167 - 0.00015 21.7 2.0 1.1 9.6 0.1 3.6 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF9167 - 0.00018 21.2 2.4 0.94 9.4 0.1 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF9167 - 0.00027 21.4 11.5 0.0062 17.0 1.0 3.3 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF9167 - 0.00053 20.6 8.6 0.2 12.5 1.2 2.9 1 1 2 3 3 3 2 Tetratricopeptide repeat Wzy_C_2 PF11846.8 ORF9167 - 0.0045 16.9 0.6 2.5 8.0 0.2 2.2 1 1 1 2 2 2 2 Virulence factor membrane-bound polymerase, C-terminal TPR_17 PF13431.6 ORF9167 - 0.0095 16.2 2.4 28 5.4 0.1 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat SNAP PF14938.6 ORF9167 - 0.034 13.6 0.3 0.044 13.2 0.3 1.2 1 0 0 1 1 1 0 Soluble NSF attachment protein, SNAP TPR_6 PF13174.6 ORF9167 - 0.053 14.2 5.5 10 7.0 0.3 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF9167 - 0.066 13.9 10.7 0.1 13.3 8.6 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat Sugar_tr PF00083.24 ORF91485 - 6.3e-26 91.2 2.1 6.9e-26 91.1 2.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter SymE_toxin PF08845.10 ORF91485 - 0.033 14.3 0.1 0.29 11.2 0.0 2.1 2 0 0 2 2 2 0 Toxin SymE, type I toxin-antitoxin system DUF3884 PF13024.6 ORF91485 - 0.057 13.0 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) Pkinase PF00069.25 ORF91349 - 5.9e-11 42.2 0.1 7.3e-11 41.9 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF91349 - 1.1e-07 31.5 0.0 1.3e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1556 PF07590.11 ORF90302 - 0.14 12.5 0.2 0.14 12.5 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1556) zf-H2C2_2 PF13465.6 ORF89891 - 1.7e-05 25.0 3.0 1.7e-05 25.0 3.0 3.0 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF89891 - 2.2e-05 24.7 13.8 5.9e-05 23.3 2.9 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-met PF12874.7 ORF89891 - 0.00046 20.5 2.1 0.00046 20.5 2.1 2.3 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 ORF89891 - 0.00077 20.1 12.9 0.0049 17.6 2.2 2.6 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF89891 - 0.0052 16.8 2.4 0.0052 16.8 2.4 2.3 2 0 0 2 2 2 1 C2H2-type zinc finger Acetyltransf_1 PF00583.25 ORF89416 - 3.1e-16 59.7 0.2 3.6e-16 59.5 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF89416 - 1.6e-11 44.2 0.1 2e-11 43.9 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF89416 - 1.1e-09 38.6 0.1 1.5e-09 38.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF89416 - 0.00057 20.0 0.1 0.00082 19.5 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF89416 - 0.057 13.6 0.0 0.092 12.9 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DUF2959 PF11172.8 ORF87201 - 0.12 12.5 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2959) HisKA PF00512.25 ORF86725 - 5.2e-08 32.8 0.0 9.4e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 ORF86725 - 5.7e-05 23.6 0.0 0.00014 22.3 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sec39 PF08314.11 ORF8633 - 0.018 13.5 0.1 0.019 13.4 0.1 1.0 1 0 0 1 1 1 0 Secretory pathway protein Sec39 Ribosom_S12_S23 PF00164.25 ORF8608 - 4e-43 145.7 0.4 5.5e-43 145.2 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Flu_C_NS1 PF03506.13 ORF85284 - 0.029 14.3 0.3 0.042 13.8 0.2 1.4 1 1 0 1 1 1 0 Influenza C non-structural protein (NS1) PolC_DP2 PF03833.13 ORF84856 - 0.064 11.1 0.0 0.068 11.0 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Transp_inhibit PF18791.1 ORF84850 - 0.3 10.6 1.2 0.53 9.8 0.1 1.9 2 0 0 2 2 2 0 Transport inhibitor response 1 protein domain S1FA PF04689.13 ORF84824 - 0.019 15.1 0.2 0.029 14.5 0.2 1.2 1 0 0 1 1 1 0 DNA binding protein S1FA DUF1163 PF06651.11 ORF84824 - 0.052 13.6 1.7 0.73 10.0 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1163) SIT PF15330.6 ORF84824 - 0.057 13.9 0.1 0.099 13.1 0.1 1.5 1 1 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT HCO3_cotransp PF00955.21 ORF84824 - 0.062 12.1 0.1 0.072 11.9 0.1 1.1 1 0 0 1 1 1 0 HCO3- transporter family OAD_gamma PF04277.13 ORF84824 - 0.14 12.7 0.0 0.25 11.9 0.0 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Zip PF02535.22 ORF84824 - 0.15 11.2 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter GAPES3 PF17154.4 ORF84694 - 0.016 15.1 1.2 3 7.9 0.1 2.2 2 0 0 2 2 2 0 Gammaproteobacterial periplasmic sensor domain Cwf_Cwc_15 PF04889.12 ORF84108 - 0.06 13.1 12.6 0.064 13.0 12.6 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DTHCT PF08070.11 ORF84108 - 0.25 12.1 7.2 0.43 11.3 7.2 1.5 1 1 0 1 1 1 0 DTHCT (NUC029) region YpjP PF14005.6 ORF84108 - 0.62 10.1 6.0 0.92 9.6 2.1 2.0 2 0 0 2 2 2 0 YpjP-like protein DUF1980 PF09323.10 ORF84108 - 4.9 7.0 5.2 7.5 6.4 5.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) PSS PF03034.15 ORF8410 - 6.1e-07 29.5 0.4 8.6e-07 29.0 0.1 1.4 2 0 0 2 2 2 1 Phosphatidyl serine synthase MCU PF04678.13 ORF8410 - 0.063 13.4 0.4 0.11 12.6 0.1 1.5 2 0 0 2 2 2 0 Mitochondrial calcium uniporter CCDC-167 PF15188.6 ORF84006 - 0.033 14.5 1.1 0.069 13.5 1.1 1.5 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF3294 PF07957.11 ORF84006 - 0.039 13.7 0.6 0.039 13.7 0.6 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3294) FliJ PF02050.16 ORF84006 - 0.089 13.0 6.9 0.036 14.3 2.4 2.3 2 1 1 3 3 3 0 Flagellar FliJ protein COMMD1_N PF17221.3 ORF84006 - 0.11 12.9 1.4 0.16 12.3 0.9 1.5 1 1 1 2 2 2 0 COMMD1 N-terminal domain COG2 PF06148.11 ORF84006 - 0.33 11.0 4.5 0.43 10.7 3.5 1.7 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 SKA1 PF07160.12 ORF84006 - 0.36 10.6 4.2 0.39 10.5 4.2 1.2 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 1 DUF4404 PF14357.6 ORF84006 - 0.78 10.4 6.4 0.97 10.1 4.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) LPP PF04728.13 ORF84006 - 0.97 9.9 7.8 0.88 10.0 1.1 3.1 2 1 1 3 3 3 0 Lipoprotein leucine-zipper Sugar_tr PF00083.24 ORF84004 - 6.3e-26 91.2 2.1 6.9e-26 91.1 2.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter SymE_toxin PF08845.10 ORF84004 - 0.033 14.3 0.1 0.29 11.2 0.0 2.1 2 0 0 2 2 2 0 Toxin SymE, type I toxin-antitoxin system DUF3884 PF13024.6 ORF84004 - 0.057 13.0 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) RNaseH_like PF04308.12 ORF83674 - 0.012 15.6 0.1 0.018 15.0 0.1 1.3 1 0 0 1 1 1 0 Ribonuclease H-like FUR PF01475.19 ORF83674 - 0.014 15.5 0.4 0.02 15.0 0.4 1.2 1 0 0 1 1 1 0 Ferric uptake regulator family TMEM223 PF14640.6 ORF83674 - 0.052 13.7 0.1 0.11 12.7 0.0 1.7 1 1 1 2 2 2 0 Transmembrane protein 223 DOMON PF03351.17 ORF83624 - 9.8e-11 41.9 0.0 1.3e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 DOMON domain DUF5455 PF17537.2 ORF83511 - 0.37 11.2 4.2 0.21 12.0 1.6 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5455) Aldo_ket_red PF00248.21 ORF82800 - 1.1e-20 74.0 0.0 1.5e-20 73.6 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family SART-1 PF03343.13 ORF82172 - 5.2e-11 41.8 13.1 6.1e-11 41.6 13.1 1.0 1 0 0 1 1 1 1 SART-1 family PHD20L1_u1 PF16660.5 ORF82172 - 0.026 15.3 0.0 0.047 14.4 0.0 1.5 1 1 0 1 1 1 0 PHD finger protein 20-like protein 1 PSS PF03034.15 ORF82112 - 6.1e-07 29.5 0.4 8.6e-07 29.0 0.1 1.4 2 0 0 2 2 2 1 Phosphatidyl serine synthase MCU PF04678.13 ORF82112 - 0.13 12.4 0.6 0.19 11.8 0.1 1.5 2 0 0 2 2 2 0 Mitochondrial calcium uniporter SIR2 PF02146.17 ORF79921 - 1.1e-13 51.5 0.0 1.7e-13 50.9 0.0 1.3 1 1 0 1 1 1 1 Sir2 family Zn-ribbon_8 PF09723.10 ORF79921 - 0.032 14.3 0.3 0.063 13.4 0.3 1.5 1 0 0 1 1 1 0 Zinc ribbon domain zf-RING_7 PF02591.15 ORF79921 - 0.08 13.1 0.1 0.17 12.1 0.1 1.6 1 0 0 1 1 1 0 C4-type zinc ribbon domain CSF-1 PF05337.11 ORF78332 - 0.13 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Macrophage colony stimulating factor-1 (CSF-1) OrgA_MxiK PF09482.10 ORF78140 - 0.038 13.9 0.2 0.048 13.5 0.2 1.2 1 0 0 1 1 1 0 Bacterial type III secretion apparatus protein (OrgA_MxiK) Methyltransf_23 PF13489.6 ORF7556 - 8.3e-09 35.5 0.0 9.9e-09 35.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF7556 - 3.5e-05 23.6 0.0 0.0008 19.2 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF7556 - 0.0001 22.8 0.0 0.00018 22.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF7556 - 0.00019 22.1 0.0 0.0003 21.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF7556 - 0.0046 17.6 0.0 0.017 15.8 0.0 1.9 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_9 PF08003.11 ORF7556 - 0.079 11.9 0.0 0.1 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Ubie_methyltran PF01209.18 ORF7556 - 0.082 12.2 0.0 0.16 11.3 0.0 1.5 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family T2SSppdC PF12528.8 ORF746 - 0.054 14.3 2.5 0.73 10.6 0.3 2.1 2 0 0 2 2 2 0 Type II secretion prepilin peptidase dependent protein C Efg1 PF10153.9 ORF71886 - 0.02 15.3 0.7 0.03 14.7 0.2 1.5 2 0 0 2 2 2 0 rRNA-processing protein Efg1 Bestrophin PF01062.21 ORF71699 - 0.0009 18.7 0.2 0.0011 18.5 0.2 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF2686 PF10887.8 ORF70133 - 3.3e-87 292.0 0.2 3.6e-87 291.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2686) PIG-S PF10510.9 ORF69974 - 0.041 12.7 0.1 0.053 12.4 0.1 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-glycan biosynthesis class S protein PAN_1 PF00024.26 ORF69802 - 3.5e-08 33.3 3.3 0.00043 20.2 0.2 2.2 2 0 0 2 2 2 2 PAN domain PAN_4 PF14295.6 ORF69802 - 1.6e-05 24.7 10.4 0.0027 17.6 2.0 2.8 3 1 0 3 3 3 2 PAN domain PAN_3 PF08277.12 ORF69802 - 0.0044 16.8 2.1 1.7 8.5 0.1 2.2 2 0 0 2 2 2 2 PAN-like domain Sporozoite_P67 PF05642.11 ORF69771 - 1.9 6.4 6.8 2.9 5.9 6.8 1.3 1 0 0 1 1 1 0 Sporozoite P67 surface antigen LupA PF18242.1 ORF69464 - 0.024 14.3 0.1 0.096 12.3 0.0 1.8 1 1 1 2 2 2 0 Legionella ubiquitin-specific protease A domain DUF334 PF03904.13 ORF69464 - 1.5 8.3 9.7 0.49 9.9 6.6 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF334) SOTI PF17079.5 ORF66686 - 0.44 11.0 2.8 1.5 9.2 0.2 2.2 1 1 1 2 2 2 0 Male-specific protein scotti SNARE PF05739.19 ORF66614 - 1.7e-05 24.7 0.3 1.7e-05 24.7 0.3 2.4 2 1 0 2 2 2 1 SNARE domain Spore_III_AF PF09581.10 ORF66614 - 0.12 12.3 5.9 0.17 11.9 5.9 1.3 1 1 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Dak2 PF02734.17 ORF66614 - 0.15 12.0 1.0 0.24 11.3 1.0 1.3 1 0 0 1 1 1 0 DAK2 domain DUF4834 PF16118.5 ORF66146 - 0.0016 19.4 0.3 0.002 19.0 0.3 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4834) Adeno_GP19K PF04881.13 ORF66146 - 0.0046 17.0 0.9 0.007 16.4 0.9 1.3 1 0 0 1 1 1 1 Adenovirus GP19K Pox_A14 PF05767.12 ORF66146 - 0.011 15.8 0.5 0.016 15.3 0.5 1.3 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 LRR19-TM PF15176.6 ORF66146 - 0.013 15.5 0.2 0.022 14.8 0.2 1.4 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Ac76 PF05814.11 ORF66146 - 0.022 14.7 0.8 0.042 13.9 0.8 1.4 1 0 0 1 1 1 0 Orf76 (Ac76) O-antigen_lig PF13425.6 ORF66146 - 0.036 12.9 1.0 0.039 12.7 1.0 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Nucleoside_tran PF01733.18 ORF66146 - 0.059 12.7 0.2 0.069 12.5 0.2 1.1 1 0 0 1 1 1 0 Nucleoside transporter MLANA PF14991.6 ORF66146 - 0.081 13.2 0.1 0.11 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein melan-A Pox_RNA_pol PF03293.14 ORF66146 - 0.093 12.4 2.1 0.15 11.8 0.6 1.8 1 1 0 2 2 2 0 Poxvirus DNA-directed RNA polymerase, 18 kD subunit DUF3139 PF11337.8 ORF66146 - 0.17 12.6 3.8 0.26 12.0 3.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) OAD_gamma PF04277.13 ORF66146 - 0.2 12.3 1.7 0.35 11.5 1.7 1.5 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Chordopox_A13L PF05961.11 ORF66146 - 2 8.7 5.8 5.3 7.4 5.8 1.8 1 1 0 1 1 1 0 Chordopoxvirus A13L protein Sigma_reg_N PF13800.6 ORF66146 - 3.4 8.0 5.9 5.2 7.4 5.9 1.6 1 1 0 1 1 1 0 Sigma factor regulator N-terminal Arf PF00025.21 ORF6359 - 5.8e-48 162.6 0.0 7.4e-48 162.3 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 ORF6359 - 2.1e-10 40.4 0.0 2.2e-10 40.4 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF6359 - 6.3e-10 39.3 0.0 7.7e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 ORF6359 - 5.2e-05 22.6 0.1 8.5e-05 21.9 0.1 1.3 1 1 0 1 1 1 1 G-protein alpha subunit SRPRB PF09439.10 ORF6359 - 0.00028 20.4 0.0 0.00036 20.0 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF6359 - 0.0024 17.2 0.0 0.0029 17.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RuvB_C PF05491.13 ORF60838 - 0.077 12.9 0.1 0.31 10.9 0.1 2.1 1 1 1 2 2 2 0 RuvB C-terminal winged helix domain zf-CCCH PF00642.24 ORF60194 - 2.1e-06 27.5 0.7 2.1e-06 27.5 0.7 1.4 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF60194 - 2.9e-06 27.1 1.8 4.8e-06 26.5 1.8 1.3 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 ORF60194 - 0.00031 20.5 1.4 0.00052 19.7 1.4 1.4 1 0 0 1 1 1 1 CCCH-type zinc finger Torus PF16131.5 ORF60194 - 0.0034 18.1 0.5 0.0058 17.3 0.1 1.7 2 0 0 2 2 2 1 Torus domain CC PF04942.14 ORF60194 - 0.018 15.2 1.0 1.4 9.2 0.0 2.4 2 0 0 2 2 2 0 CC domain zf-CCCH_2 PF14608.6 ORF60194 - 0.086 13.3 2.1 0.18 12.3 2.1 1.6 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger SAPIS-gp6 PF16722.5 ORF60194 - 0.19 12.1 0.0 0.3 11.5 0.0 1.3 1 0 0 1 1 1 0 Pathogenicity island protein gp6 in Staphylococcus TOH_N PF12549.8 ORF59079 - 0.023 14.5 2.3 0.046 13.6 2.3 1.5 1 0 0 1 1 1 0 Tyrosine hydroxylase N terminal EIIA-man PF03610.16 ORF58782 - 1.9e-27 95.8 0.0 2.2e-27 95.6 0.0 1.1 1 0 0 1 1 1 1 PTS system fructose IIA component BphX PF06139.12 ORF58782 - 0.2 11.6 0.0 0.28 11.1 0.0 1.2 1 0 0 1 1 1 0 BphX-like Tom37_C PF11801.8 ORF56595 - 0.1 12.6 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Tom37 C-terminal domain Ribosom_S12_S23 PF00164.25 ORF55607 - 4e-43 145.7 0.4 5.5e-43 145.2 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 GNAT_C PF18164.1 ORF53858 - 0.096 12.4 0.1 0.19 11.4 0.1 1.5 1 0 0 1 1 1 0 GNAT-like C-terminal domain Bep_C_terminal PF17841.1 ORF53672 - 0.091 13.0 0.2 0.14 12.3 0.2 1.3 1 0 0 1 1 1 0 BID domain of Bartonella effector protein (Bep) Sof1 PF04158.14 ORF52869 - 1.5 9.2 8.0 0.12 12.6 2.5 2.0 2 1 0 2 2 2 0 Sof1-like domain HisKA PF00512.25 ORF52760 - 5.2e-08 32.8 0.0 9.4e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 ORF52760 - 5.7e-05 23.6 0.0 0.00014 22.3 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KdpA PF03814.15 ORF52301 - 7.8e-59 199.3 7.6 8.6e-59 199.2 7.6 1.0 1 0 0 1 1 1 1 Potassium-transporting ATPase A subunit Peptidase_S9 PF00326.21 ORF51106 - 9e-30 103.7 0.0 9.9e-30 103.6 0.0 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family Prp31_C PF09785.9 ORF51024 - 4.5e-28 98.6 4.0 5.9e-28 98.2 4.0 1.2 1 0 0 1 1 1 1 Prp31 C terminal domain Hydrolase_4 PF12146.8 ORF50668 - 4.7e-14 52.2 0.0 6.5e-14 51.8 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Sporozoite_P67 PF05642.11 ORF50143 - 1.9 6.4 6.8 2.9 5.9 6.8 1.3 1 0 0 1 1 1 0 Sporozoite P67 surface antigen ECH_1 PF00378.20 ORF49485 - 4.8e-10 39.2 0.0 5.9e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Pkinase PF00069.25 ORF49086 - 3.7e-07 29.8 0.0 5.6e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain TOH_N PF12549.8 ORF4839 - 0.023 14.5 2.3 0.046 13.6 2.3 1.5 1 0 0 1 1 1 0 Tyrosine hydroxylase N terminal MORN PF02493.20 ORF48133 - 1.2e-28 97.2 43.2 8.3e-07 28.6 3.4 6.7 7 0 0 7 7 7 6 MORN repeat DUF3048_C PF17479.2 ORF48133 - 2 8.9 10.4 1.3 9.5 1.0 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain ID PF18543.1 ORF48133 - 3.7 7.6 5.0 2.9 8.0 0.7 2.9 4 0 0 4 4 4 0 Intracellular delivery domain DOMON PF03351.17 ORF47183 - 9.8e-11 41.9 0.0 1.3e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 DOMON domain DUF2861 PF11060.8 ORF46774 - 0.056 13.0 0.6 0.06 12.9 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2861) Fis1_TPR_C PF14853.6 ORF46774 - 0.2 11.7 1.6 0.76 9.9 0.1 2.4 3 0 0 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat PHM7_cyt PF14703.6 ORF46774 - 0.74 10.0 5.6 0.13 12.5 2.2 1.5 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Sec23_trunk PF04811.15 ORF46539 - 2.5e-30 105.8 0.2 2.8e-30 105.7 0.2 1.0 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain DUF3584 PF12128.8 ORF44745 - 0.64 7.5 23.2 0.76 7.2 23.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF5401 PF17380.2 ORF44745 - 0.9 7.5 29.6 1.1 7.3 29.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF1043 PF06295.12 ORF44745 - 2.2 8.3 19.1 7.5 6.6 19.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) Flu_C_NS1 PF03506.13 ORF44277 - 0.029 14.3 0.3 0.042 13.8 0.2 1.4 1 1 0 1 1 1 0 Influenza C non-structural protein (NS1) Fer4_7 PF12838.7 ORF4343 - 2.4e-12 47.2 30.3 1.3e-09 38.5 10.6 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 ORF4343 - 7.3e-09 35.1 23.2 3.7e-08 32.8 1.4 4.4 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.6 ORF4343 - 1.8e-06 28.0 11.8 1.8e-06 28.0 11.8 2.7 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF4343 - 3.2e-06 28.0 18.8 0.0011 19.9 9.9 3.2 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 ORF4343 - 1.9e-05 24.7 7.9 1.9e-05 24.7 7.9 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF4343 - 0.0023 17.9 1.5 0.0023 17.9 1.5 4.1 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_6 PF12837.7 ORF4343 - 0.0023 17.9 4.2 0.0023 17.9 4.2 4.5 4 1 0 4 4 4 1 4Fe-4S binding domain Fer4_10 PF13237.6 ORF4343 - 0.004 17.2 23.2 0.0057 16.7 14.0 3.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF4343 - 0.0055 17.6 3.6 0.0055 17.6 3.6 4.3 4 1 0 4 4 4 1 4Fe-4S binding domain Fer4_17 PF13534.6 ORF4343 - 0.0057 17.2 1.6 0.0057 17.2 1.6 3.3 1 1 3 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF4343 - 0.015 15.7 10.1 0.015 15.7 10.1 2.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF4343 - 0.042 14.4 2.2 0.042 14.4 2.2 4.2 4 1 0 4 4 4 0 4Fe-4S binding domain zf-TFIIIC PF12660.7 ORF4343 - 0.19 11.7 7.6 0.21 11.6 0.4 2.3 2 0 0 2 2 2 0 Putative zinc-finger of transcription factor IIIC complex ETF_QO PF05187.13 ORF4343 - 1.5 8.9 9.9 0.14 12.3 4.4 2.1 2 2 0 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Gryzun PF07919.12 ORF42886 - 0.0079 15.0 0.3 0.0082 15.0 0.3 1.0 1 0 0 1 1 1 1 Gryzun, putative trafficking through Golgi HTH_Tnp_IS630 PF01710.16 ORF42886 - 1 9.4 7.4 1.9 8.5 7.1 1.8 1 1 0 1 1 1 0 Transposase TMEM208_SND2 PF05620.11 ORF42434 - 0.52 10.1 4.5 0.39 10.5 2.9 1.6 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 PARP PF00644.20 ORF4160 - 6.9e-17 61.7 0.0 1.1e-16 61.1 0.0 1.3 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain TolA_bind_tri PF16331.5 ORF40826 - 0.01 15.9 9.2 0.32 11.1 0.2 2.4 1 1 1 2 2 2 0 TolA binding protein trimerisation FlxA PF14282.6 ORF40826 - 0.01 15.8 5.8 0.014 15.4 5.8 1.2 1 0 0 1 1 1 0 FlxA-like protein AI-2E_transport PF01594.16 ORF40826 - 0.031 13.4 0.0 0.031 13.4 0.0 1.7 2 0 0 2 2 2 0 AI-2E family transporter RRP36 PF06102.12 ORF40826 - 0.04 13.9 11.5 0.05 13.6 11.5 1.1 1 0 0 1 1 1 0 rRNA biogenesis protein RRP36 Neur_chan_memb PF02932.16 ORF40826 - 0.09 12.8 0.5 0.11 12.5 0.5 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4446 PF14584.6 ORF40826 - 0.1 12.6 0.3 0.1 12.6 0.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF4349 PF14257.6 ORF40826 - 0.11 11.9 3.8 0.17 11.3 3.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF2797 PF10977.8 ORF40826 - 0.13 12.1 2.3 0.16 11.8 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) PBP1_TM PF14812.6 ORF40826 - 0.23 11.9 13.5 0.16 12.4 2.3 2.2 1 1 1 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal zf-CpG_bind_C PF12269.8 ORF40826 - 0.33 10.7 6.5 0.4 10.4 6.5 1.1 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain DUF4094 PF13334.6 ORF40826 - 0.36 11.3 2.4 0.26 11.7 0.9 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) Spc24 PF08286.11 ORF40826 - 0.43 10.9 14.8 0.22 11.8 9.4 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 PRKG1_interact PF15898.5 ORF40826 - 0.53 11.2 15.1 0.48 11.4 11.8 2.0 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain TMF_DNA_bd PF12329.8 ORF40826 - 0.86 9.6 16.7 0.28 11.2 12.5 1.9 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF4407 PF14362.6 ORF40826 - 1.1 8.5 9.9 0.63 9.3 8.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) ALMT PF11744.8 ORF40826 - 1.7 7.4 6.4 2.2 7.0 6.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter FapA PF03961.13 ORF40826 - 3 6.3 9.7 3.5 6.1 9.7 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A HCMV_UL139 PF12507.8 ORF40826 - 3.4 8.1 8.8 2.7 8.4 4.7 2.0 1 1 1 2 2 2 0 Human Cytomegalovirus UL139 protein EMC3_TMCO1 PF01956.16 ORF40826 - 4.5 7.0 8.2 94 2.7 8.0 2.2 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Atg14 PF10186.9 ORF40826 - 4.9 6.2 11.2 6.2 5.8 11.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 NOA36 PF06524.12 ORF40826 - 7.2 5.8 9.6 8.9 5.5 9.6 1.1 1 0 0 1 1 1 0 NOA36 protein zf-MYND PF01753.18 ORF40580 - 0.06 13.4 1.6 0.14 12.3 1.6 1.6 1 0 0 1 1 1 0 MYND finger DHR10 PF18595.1 ORF40552 - 0.0069 16.4 0.4 0.0069 16.4 0.4 1.7 2 0 0 2 2 2 1 Designed helical repeat protein 10 domain GAS PF13851.6 ORF40552 - 0.0075 15.6 0.6 0.0097 15.3 0.6 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding HAUS-augmin3 PF14932.6 ORF40552 - 0.02 14.5 0.5 0.026 14.1 0.5 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Filament PF00038.21 ORF40552 - 0.023 14.3 1.7 0.026 14.1 1.7 1.2 1 0 0 1 1 1 0 Intermediate filament protein DUF4455 PF14643.6 ORF40552 - 0.026 13.2 0.8 0.053 12.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4455) HALZ PF02183.18 ORF40552 - 0.27 11.5 5.2 39 4.6 0.7 3.1 3 0 0 3 3 3 0 Homeobox associated leucine zipper Lustrin_cystein PF14625.6 ORF40375 - 0.037 14.4 40.6 1.2 9.5 0.4 6.4 2 2 2 4 4 4 0 Lustrin, cysteine-rich repeated domain TetR_C_31 PF17940.1 ORF38270 - 0.053 13.7 0.0 0.082 13.1 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Lustrin_cystein PF14625.6 ORF36940 - 0.037 14.4 40.6 1.2 9.5 0.4 6.4 2 2 2 4 4 4 0 Lustrin, cysteine-rich repeated domain Pneumo_att_G PF05539.11 ORF36379 - 0.28 10.8 4.2 0.32 10.6 4.2 1.1 1 0 0 1 1 1 0 Pneumovirinae attachment membrane glycoprotein G DUF192 PF02643.15 ORF35812 - 0.2 11.8 1.2 2.2 8.5 0.2 2.5 1 1 1 3 3 3 0 Uncharacterized ACR, COG1430 Acetyltransf_3 PF13302.7 ORF35334 - 0.00019 22.1 0.0 0.00022 21.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Protocadherin PF08374.11 ORF34434 - 0.0038 17.2 0.4 0.0042 17.1 0.4 1.1 1 0 0 1 1 1 1 Protocadherin Spc7 PF08317.11 ORF34434 - 0.0054 15.6 7.9 0.0061 15.5 7.9 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF3584 PF12128.8 ORF34434 - 0.012 13.1 13.1 0.015 12.9 13.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ADIP PF11559.8 ORF34434 - 0.016 15.3 10.6 0.024 14.7 10.6 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding TPR_MLP1_2 PF07926.12 ORF34434 - 0.23 11.5 17.3 0.35 10.9 17.3 1.3 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 ORF34434 - 0.23 10.8 7.1 0.29 10.4 7.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spore_III_AB PF09548.10 ORF34434 - 0.33 11.0 5.3 1.8 8.6 0.0 2.2 2 0 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) DUF4200 PF13863.6 ORF34434 - 0.48 10.8 18.8 2.4 8.6 14.6 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) Atg14 PF10186.9 ORF34434 - 0.62 9.1 8.5 0.75 8.8 8.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 OmpH PF03938.14 ORF34434 - 1.3 9.4 22.8 3.8 7.9 6.5 2.1 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Exonuc_VII_L PF02601.15 ORF34434 - 1.9 8.0 7.6 2.1 7.8 7.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit PRP38_assoc PF12871.7 ORF34434 - 2.2 9.0 7.5 3.6 8.3 7.3 1.6 1 1 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term DUF3800 PF12686.7 ORF34212 - 0.11 13.1 2.5 0.15 12.7 2.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3800) Spo12 PF05032.12 ORF34212 - 0.19 11.7 0.7 0.47 10.4 0.7 1.6 1 0 0 1 1 1 0 Spo12 family Efg1 PF10153.9 ORF34209 - 0.02 15.3 0.7 0.03 14.7 0.2 1.5 2 0 0 2 2 2 0 rRNA-processing protein Efg1 EamA PF00892.20 ORF33862 - 1.2e-15 57.9 5.8 1.5e-15 57.6 5.8 1.2 1 0 0 1 1 1 1 EamA-like transporter family Nuc_sug_transp PF04142.15 ORF33862 - 0.0028 16.9 1.5 0.0061 15.8 0.3 1.7 1 1 1 2 2 2 1 Nucleotide-sugar transporter Sugar_transport PF06800.12 ORF33862 - 0.0032 16.8 4.4 0.0045 16.4 4.4 1.2 1 0 0 1 1 1 1 Sugar transport protein PUNUT PF16913.5 ORF33862 - 0.0034 16.7 4.2 0.0042 16.3 3.9 1.3 1 1 0 1 1 1 1 Purine nucleobase transmembrane transport Nab2p_Zf1 PF18260.1 ORF33862 - 0.011 15.7 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 EmrE PF13536.6 ORF33862 - 0.088 12.4 6.2 0.11 12.0 6.2 1.2 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter KRBA1 PF15287.6 ORF33813 - 0.0036 16.9 0.0 3.1 7.6 0.0 3.1 2 0 0 2 2 2 2 KRBA1 family repeat BatA PF07584.11 ORF33813 - 0.02 15.3 1.0 0.055 13.8 0.7 1.9 1 1 1 2 2 2 0 Aerotolerance regulator N-terminal HARP PF07443.13 ORF33813 - 0.13 11.9 0.0 24 4.7 0.0 2.6 3 0 0 3 3 3 0 HepA-related protein (HARP) TMEM208_SND2 PF05620.11 ORF332 - 0.53 10.0 4.5 0.39 10.5 2.9 1.6 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks156.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks156.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks156.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks156.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SNARE PF05739.19 ORF32345 - 0.57 10.2 2.3 0.88 9.6 2.3 1.2 1 0 0 1 1 1 0 SNARE domain PCSK9_C2 PF18464.1 ORF32320 - 0.032 14.3 3.7 3.1 7.9 0.2 2.3 2 0 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain DUF3013 PF11217.8 ORF29958 - 0.0056 16.6 0.9 1.8 8.4 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF3013) TGS PF02824.21 ORF29958 - 0.13 12.3 0.0 0.95 9.6 0.0 2.0 2 0 0 2 2 2 0 TGS domain DUF4516 PF14990.6 ORF273 - 0.13 12.0 0.9 0.23 11.2 0.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) Ribosom_S12_S23 PF00164.25 ORF2656 - 4e-43 145.7 0.4 5.5e-43 145.2 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Collagen PF01391.18 ORF25638 - 0.035 13.8 1.4 0.054 13.3 1.4 1.2 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) Aminotran_5 PF00266.19 ORF2550 - 1e-08 34.6 0.0 1.3e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DUF4580 PF15162.6 ORF2550 - 0.16 11.5 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4580) Glyco_hydro_5_C PF18564.1 ORF25332 - 2.2e-13 50.5 0.0 3e-13 50.1 0.0 1.2 1 0 0 1 1 1 1 Glycoside hydrolase family 5 C-terminal domain Ribosom_S12_S23 PF00164.25 ORF24840 - 4e-43 145.7 0.4 5.5e-43 145.2 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Peroxin-13_N PF04088.13 ORF21900 - 0.067 13.5 0.6 0.62 10.3 0.1 2.0 1 1 1 2 2 2 0 Peroxin 13, N-terminal region U3_snoRNA_assoc PF08297.11 ORF21900 - 0.11 13.2 0.0 0.11 13.2 0.0 2.2 2 1 1 3 3 3 0 U3 snoRNA associated Hrs_helical PF12210.8 ORF21900 - 0.37 11.4 4.6 1.8 9.1 0.5 2.8 2 1 1 3 3 3 0 Hepatocyte growth factor-regulated tyrosine kinase substrate TOH_N PF12549.8 ORF20228 - 0.023 14.5 2.3 0.046 13.6 2.3 1.5 1 0 0 1 1 1 0 Tyrosine hydroxylase N terminal DUF4883 PF16224.5 ORF19814 - 0.19 12.0 2.4 2.5 8.4 0.3 2.1 2 0 0 2 2 2 0 DOmain of unknown function (DUF4883) DUF2830 PF11125.8 ORF1962 - 4 7.5 8.0 9.9 6.2 5.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2830) T2SSppdC PF12528.8 ORF18934 - 0.054 14.3 2.5 0.73 10.6 0.3 2.1 2 0 0 2 2 2 0 Type II secretion prepilin peptidase dependent protein C HMG_CoA_synt_N PF01154.17 ORF18781 - 4.7e-69 231.7 0.7 5.2e-69 231.6 0.7 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal CDP-OH_P_transf PF01066.21 ORF18577 - 4.1e-11 43.5 0.4 4.1e-11 43.5 0.4 1.8 2 0 0 2 2 2 1 CDP-alcohol phosphatidyltransferase TylF PF05711.11 ORF18260 - 0.00015 21.1 0.0 0.00018 20.9 0.0 1.1 1 0 0 1 1 1 1 Macrocin-O-methyltransferase (TylF) HMG_CoA_synt_N PF01154.17 ORF18036 - 4.7e-69 231.7 0.7 5.2e-69 231.6 0.7 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal Pkinase PF00069.25 ORF18029 - 6.1e-39 134.0 4.8 7.3e-39 133.7 4.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18029 - 1.4e-22 80.3 0.8 1.6e-22 80.1 0.8 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF18029 - 0.00082 18.8 0.3 0.68 9.2 0.1 2.2 1 1 1 2 2 2 2 Kinase-like FTA2 PF13095.6 ORF18029 - 0.0012 18.5 0.8 0.63 9.6 0.0 2.1 1 1 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 ORF18029 - 0.0053 16.4 2.7 0.011 15.3 2.7 1.4 1 1 0 1 1 1 1 RIO1 family APH PF01636.23 ORF18029 - 0.025 14.5 0.1 0.13 12.1 0.1 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF18029 - 0.054 12.8 0.3 0.093 12.1 0.3 1.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family HisKA PF00512.25 ORF17108 - 5.2e-08 32.8 0.0 9.4e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 ORF17108 - 5.7e-05 23.6 0.0 0.00014 22.3 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOMON PF03351.17 ORF16046 - 9.8e-11 41.9 0.0 1.3e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 DOMON domain S1FA PF04689.13 ORF12291 - 0.019 15.1 0.2 0.029 14.5 0.2 1.2 1 0 0 1 1 1 0 DNA binding protein S1FA DUF1163 PF06651.11 ORF12291 - 0.049 13.7 1.6 0.75 9.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1163) SIT PF15330.6 ORF12291 - 0.058 13.8 0.1 0.12 12.9 0.1 1.5 1 1 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT HCO3_cotransp PF00955.21 ORF12291 - 0.061 12.1 0.1 0.07 11.9 0.1 1.1 1 0 0 1 1 1 0 HCO3- transporter family Zip PF02535.22 ORF12291 - 0.15 11.3 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter PspB PF06667.12 ORF12291 - 0.15 12.1 0.7 0.35 11.0 0.0 2.0 2 0 0 2 2 2 0 Phage shock protein B OAD_gamma PF04277.13 ORF12291 - 0.16 12.6 0.1 0.25 12.0 0.1 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain RCDG1 PF15725.5 ORF12285 - 0.056 13.9 3.3 0.13 12.7 3.3 1.7 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein Sporozoite_P67 PF05642.11 ORF12162 - 1.9 6.4 6.8 2.9 5.9 6.8 1.3 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Pkinase PF00069.25 ORF112521 - 1.3e-05 24.7 0.0 1.8e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DFF40 PF09230.10 ORF112521 - 0.0078 15.8 0.4 0.9 9.1 0.1 2.2 2 0 0 2 2 2 2 DNA fragmentation factor 40 kDa AICARFT_IMPCHas PF01808.18 ORF112521 - 0.07 12.6 0.0 0.094 12.1 0.0 1.1 1 0 0 1 1 1 0 AICARFT/IMPCHase bienzyme Usp PF00582.26 ORF112214 - 2.5e-21 76.7 0.0 2.8e-21 76.5 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family TPP_enzyme_M PF00205.22 ORF112214 - 0.048 13.4 0.0 0.71 9.6 0.0 2.6 2 1 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain ETF PF01012.21 ORF112214 - 0.074 12.9 0.0 0.97 9.3 0.0 2.1 2 0 0 2 2 2 0 Electron transfer flavoprotein domain OmpA_membrane PF01389.17 ORF112214 - 0.18 11.5 0.0 0.37 10.5 0.0 1.4 1 1 0 1 1 1 0 OmpA-like transmembrane domain adh_short PF00106.25 ORF111512 - 3e-29 101.9 0.0 3.3e-29 101.7 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF111512 - 9.8e-22 77.7 0.0 3.2e-21 76.0 0.0 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF111512 - 0.024 14.5 0.1 0.029 14.3 0.1 1.1 1 0 0 1 1 1 0 KR domain DUF1776 PF08643.10 ORF111512 - 0.07 12.5 0.0 0.082 12.3 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) CobW_C PF07683.14 ORF110877 - 0.042 13.8 0.1 0.066 13.1 0.1 1.3 1 0 0 1 1 1 0 Cobalamin synthesis protein cobW C-terminal domain Takusan PF04822.13 ORF109929 - 0.0024 17.7 10.3 0.021 14.7 6.1 2.4 2 1 0 2 2 2 1 Takusan Filament PF00038.21 ORF109929 - 0.011 15.3 9.4 0.015 14.9 9.4 1.0 1 0 0 1 1 1 0 Intermediate filament protein BLOC1_2 PF10046.9 ORF109929 - 0.012 15.8 6.5 0.012 15.8 6.5 2.2 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 ORF109929 - 0.015 15.3 2.2 0.022 14.8 2.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2089 PF09862.9 ORF109929 - 0.044 13.8 2.3 0.077 13.0 2.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2089) WD-3 PF09765.9 ORF109929 - 0.063 12.6 3.3 0.065 12.6 3.3 1.1 1 0 0 1 1 1 0 WD-repeat region CpcD PF01383.21 ORF109929 - 0.071 13.4 0.1 0.15 12.3 0.1 1.6 1 0 0 1 1 1 0 CpcD/allophycocyanin linker domain Neil1-DNA_bind PF09292.10 ORF109929 - 0.16 12.0 0.4 0.16 12.0 0.4 2.5 2 1 1 3 3 3 0 Endonuclease VIII-like 1, DNA bind DUF3450 PF11932.8 ORF109929 - 0.23 10.7 7.2 1.4 8.1 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Tup_N PF08581.10 ORF109929 - 0.23 11.8 8.9 0.6 10.5 0.9 2.4 2 0 0 2 2 2 0 Tup N-terminal FapA PF03961.13 ORF109929 - 0.36 9.4 7.9 0.43 9.1 7.9 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DASH_Dam1 PF08653.10 ORF109929 - 0.58 10.0 5.3 8.1 6.3 0.1 2.9 2 1 1 3 3 3 0 DASH complex subunit Dam1 YabA PF06156.13 ORF109929 - 1.4 9.6 9.2 2.4 8.8 4.4 2.1 1 1 1 2 2 2 0 Initiation control protein YabA FCH PF00611.23 ORF109929 - 1.9 8.8 6.5 1.9 8.9 1.1 2.9 2 1 1 3 3 3 0 Fes/CIP4, and EFC/F-BAR homology domain PI_PP_I PF18363.1 ORF109929 - 4 7.7 7.5 4.6 7.5 4.8 2.3 1 1 1 2 2 2 0 Phosphoinositide phosphatase insertion domain TRP PF06011.12 ORF109876 - 6.6e-06 25.1 7.9 8.3e-06 24.8 7.9 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Cadherin_C_2 PF16492.5 ORF109876 - 0.00045 20.9 0.9 0.00045 20.9 0.9 1.6 2 0 0 2 2 2 1 Cadherin cytoplasmic C-terminal Shisa PF13908.6 ORF109876 - 0.0032 17.7 0.2 0.0055 17.0 0.2 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator PAG PF15347.6 ORF109876 - 0.0053 15.8 0.2 0.0063 15.6 0.2 1.1 1 0 0 1 1 1 1 Phosphoprotein associated with glycosphingolipid-enriched DUF2663 PF10864.8 ORF109876 - 0.28 11.6 5.3 0.26 11.7 4.2 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2663) Tom6 PF17112.5 ORF109773 - 5.6 6.6 8.8 6.5 6.3 0.4 3.4 4 0 0 4 4 4 0 Mitochondrial import receptor subunit Tom6, fungal DUF3087 PF11286.8 ORF109157 - 0.016 14.7 0.9 0.044 13.3 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3087) Peptidase_C26 PF07722.13 ORF108016 - 3.2e-11 43.4 0.0 4.5e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase C26 Ribosomal_L11 PF00298.19 ORF107697 - 1.6e-25 89.4 0.0 2.2e-25 89.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 ORF107697 - 1.6e-21 75.9 0.0 5e-21 74.3 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Sugar_tr PF00083.24 ORF10747 - 6.3e-26 91.2 2.1 6.9e-26 91.1 2.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter SymE_toxin PF08845.10 ORF10747 - 0.033 14.3 0.1 0.29 11.2 0.0 2.1 2 0 0 2 2 2 0 Toxin SymE, type I toxin-antitoxin system DUF3884 PF13024.6 ORF10747 - 0.057 13.0 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) AbiEi_4 PF13338.6 ORF106724 - 0.1 12.8 0.0 0.21 11.8 0.0 1.6 1 1 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin DOMON PF03351.17 ORF106388 - 9.8e-11 41.9 0.0 1.3e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 DOMON domain Mso1_Sec1_bdg PF14475.6 ORF105908 - 0.15 11.7 0.0 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 Sec1-binding region of Mso1 RsmJ PF04378.13 ORF104118 - 1e-19 70.8 0.0 1e-19 70.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA large subunit methyltransferase D, RlmJ PIG-S PF10510.9 ORF102738 - 0.041 12.7 0.1 0.053 12.4 0.1 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-glycan biosynthesis class S protein DUF2240 PF09999.9 ORF100447 - 0.011 15.3 0.5 0.018 14.6 0.1 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) SPOUT_MTase PF02590.17 ORF100376 - 2.6e-42 144.4 0.0 2.9e-42 144.3 0.0 1.0 1 0 0 1 1 1 1 Predicted SPOUT methyltransferase EF-hand_7 PF13499.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.00054 20.4 0.3 0.0014 19.0 0.2 1.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.00094 19.0 1.2 0.0014 18.4 0.1 1.9 3 0 0 3 3 3 1 EF-hand domain pair DUF4483 PF14825.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.0043 16.8 0.2 0.0054 16.5 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4483) EF-hand_6 PF13405.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.034 14.1 0.1 0.16 12.0 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain GYF_2 PF14237.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.19 11.5 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 GYF domain 2 Vma12 PF11712.8 NODE_45714_length_427_cov_128.780612_g37925_i0forward_frame_1 - 0.083 13.0 2.1 0.14 12.2 2.1 1.4 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase RSN1_7TM PF02714.15 NODE_45683_length_428_cov_2.386768_g37899_i0reverse_frame_1 - 0.00075 18.9 4.6 0.001 18.5 4.6 1.1 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate Cytochrom_B_C PF00032.17 NODE_45672_length_428_cov_47.050891_g37888_i0reverse_frame_1 - 0.5 10.7 4.3 2.9 8.2 3.9 2.0 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD TraS PF10624.9 NODE_45672_length_428_cov_47.050891_g37888_i0forward_frame_1 - 6.7 6.6 8.6 9.2 6.2 8.3 1.4 1 1 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS DUF5479 PF17575.2 NODE_45653_length_428_cov_97.010178_g37869_i0reverse_frame_1 - 0.082 13.5 0.2 0.13 12.8 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5479) PBP1_TM PF14812.6 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_1 - 0.066 13.6 1.4 0.096 13.1 1.4 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Thy1 PF02511.15 NODE_45632_length_428_cov_2362.407125_g37848_i0forward_frame_1 - 0.069 13.0 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 Thymidylate synthase complementing protein BofA PF07441.11 NODE_45627_length_428_cov_2782.000000_g36700_i2forward_frame_1 - 3.5 7.9 12.1 0.5 10.6 2.4 2.2 2 0 0 2 2 2 0 SigmaK-factor processing regulatory protein BofA ATP-synt_F PF01990.17 NODE_45624_length_428_cov_34713.552163_g37842_i0forward_frame_1 - 7.3e-28 96.7 0.6 9.8e-28 96.3 0.6 1.2 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit AI-2E_transport PF01594.16 NODE_45619_length_429_cov_1.911168_g37837_i0forward_frame_1 - 0.045 12.9 0.2 0.06 12.5 0.2 1.1 1 0 0 1 1 1 0 AI-2E family transporter SAS-6_N PF16531.5 NODE_45596_length_429_cov_10.543147_g37814_i0forward_frame_1 - 0.11 13.1 1.8 0.16 12.6 0.7 1.8 1 1 1 2 2 2 0 Centriolar protein SAS N-terminal EF-hand_8 PF13833.6 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 1.6e-08 34.2 1.6 3.3e-08 33.3 1.6 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 1.9e-07 30.1 1.6 3.3e-07 29.4 0.5 2.0 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 5e-05 22.9 1.0 0.00022 20.9 0.1 2.2 2 1 0 2 2 2 1 EF-hand domain EF-hand_4 PF12763.7 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 0.00013 21.8 0.7 0.00028 20.8 0.7 1.6 1 1 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_5 PF13202.6 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 0.00014 21.2 0.4 0.00028 20.3 0.4 1.5 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 0.00062 20.2 2.4 0.0013 19.2 2.4 1.6 1 1 0 1 1 1 1 EF-hand domain pair Aldo_ket_red PF00248.21 NODE_45593_length_429_cov_48.230964_g37811_i0reverse_frame_1 - 5.9e-18 65.1 0.0 7.1e-18 64.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family FYVE_2 PF02318.16 NODE_45590_length_429_cov_53.680203_g37808_i0forward_frame_1 - 0.32 11.2 2.1 6.3 7.0 0.1 2.2 2 0 0 2 2 2 0 FYVE-type zinc finger Methyltransf_21 PF05050.12 NODE_45584_length_429_cov_74.076142_g37802_i0forward_frame_1 - 0.002 18.2 0.0 0.0029 17.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain YajC PF02699.15 NODE_45572_length_429_cov_153.908629_g37790_i0reverse_frame_1 - 4.1 7.3 5.7 0.64 9.9 1.9 1.6 2 0 0 2 2 2 0 Preprotein translocase subunit Mis12 PF05859.12 NODE_45561_length_429_cov_1042.611675_g37185_i2reverse_frame_1 - 0.0071 16.4 1.0 0.0087 16.1 1.0 1.1 1 0 0 1 1 1 1 Mis12 protein zf-Tim10_DDP PF02953.15 NODE_45561_length_429_cov_1042.611675_g37185_i2reverse_frame_1 - 0.016 14.9 0.3 0.045 13.4 0.3 1.8 1 0 0 1 1 1 0 Tim10/DDP family zinc finger DUF2671 PF10877.8 NODE_45560_length_429_cov_2774.949239_g36700_i1forward_frame_1 - 0.024 14.4 0.6 0.055 13.3 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) PDR_CDR PF06422.12 NODE_45560_length_429_cov_2774.949239_g36700_i1forward_frame_1 - 8.9 6.3 8.1 48 3.9 8.1 1.9 1 1 0 1 1 1 0 CDR ABC transporter Glyco_hydro_59 PF02057.15 NODE_45553_length_430_cov_1.769620_g37775_i0reverse_frame_3 - 0.0012 18.1 0.1 0.0014 17.9 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 59 Pkinase_fungal PF17667.1 NODE_45551_length_430_cov_1.898734_g37773_i0forward_frame_2 - 0.0042 15.9 0.1 0.0049 15.7 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase EPTP PF03736.17 NODE_45550_length_430_cov_2.103797_g37772_i0reverse_frame_3 - 0.15 12.1 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 EPTP domain MASE2 PF05230.11 NODE_45550_length_430_cov_2.103797_g37772_i0forward_frame_2 - 0.059 13.4 0.1 0.08 13.0 0.1 1.4 1 0 0 1 1 1 0 MASE2 domain Pilosulin PF17499.2 NODE_45541_length_430_cov_2.645570_g37763_i0forward_frame_3 - 0.21 11.8 0.7 2.9 8.1 0.1 2.1 2 0 0 2 2 2 0 Ant venom peptides zf_PR_Knuckle PF18445.1 NODE_45536_length_430_cov_5.293671_g37758_i0forward_frame_3 - 0.089 12.6 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 PR zinc knuckle motif OKR_DC_1 PF01276.20 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 0.031 13.0 2.0 0.036 12.8 2.0 1.0 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain FAA_hydro_N_2 PF18288.1 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 0.039 14.4 1.1 0.066 13.6 0.2 1.8 2 0 0 2 2 2 0 Fumarylacetoacetase N-terminal domain 2 MRFAP1 PF15155.6 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 0.12 12.9 3.8 0.14 12.7 3.1 1.3 1 1 0 1 1 1 0 MORF4 family-associated protein1 Nup54 PF13874.6 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 0.81 9.8 11.7 4.6 7.4 11.7 2.0 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 Plk4_PB2 PF18409.1 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 1 10.1 7.6 0.55 11.0 2.2 2.1 1 1 0 2 2 2 0 Polo-like Kinase 4 Polo Box 2 DUF1664 PF07889.12 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 7 6.7 14.2 0.35 10.9 4.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Sds3 PF08598.11 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_2 - 0.22 11.5 13.8 0.24 11.4 13.8 1.1 1 0 0 1 1 1 0 Sds3-like Chi-conotoxin PF16981.5 NODE_45532_length_430_cov_35.136709_g37754_i0reverse_frame_3 - 0.063 13.5 1.4 0.14 12.5 1.4 1.6 1 0 0 1 1 1 0 chi-Conotoxin or t superfamily RAMP4 PF06624.12 NODE_45532_length_430_cov_35.136709_g37754_i0forward_frame_3 - 0.0044 17.0 3.3 0.0098 15.9 3.3 1.6 1 0 0 1 1 1 1 Ribosome associated membrane protein RAMP4 Foamy_virus_ENV PF03408.14 NODE_45532_length_430_cov_35.136709_g37754_i0forward_frame_3 - 2.3 5.9 4.2 2.9 5.6 4.2 1.1 1 0 0 1 1 1 0 Foamy virus envelope protein COE1_DBD PF16422.5 NODE_45531_length_430_cov_47.969620_g37753_i0reverse_frame_3 - 0.015 14.8 0.1 1.8 8.0 0.0 2.1 2 0 0 2 2 2 0 Transcription factor COE1 DNA-binding domain MAGP PF05507.11 NODE_45530_length_430_cov_48.382278_g37752_i0forward_frame_2 - 0.17 12.3 0.6 13 6.2 0.1 2.1 2 0 0 2 2 2 0 Microfibril-associated glycoprotein (MAGP) Thioredoxin PF00085.20 NODE_45528_length_430_cov_58.202532_g37750_i0reverse_frame_2 - 1.4e-07 31.4 0.1 2.9e-07 30.4 0.1 1.5 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 NODE_45528_length_430_cov_58.202532_g37750_i0reverse_frame_2 - 0.0049 17.2 0.1 0.015 15.7 0.0 1.8 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_7 PF13899.6 NODE_45528_length_430_cov_58.202532_g37750_i0reverse_frame_2 - 0.01 16.0 0.1 0.018 15.2 0.1 1.4 1 0 0 1 1 1 0 Thioredoxin-like Gp45_2 PF17470.2 NODE_45528_length_430_cov_58.202532_g37750_i0reverse_frame_2 - 0.064 13.2 0.0 0.16 11.9 0.0 1.7 1 0 0 1 1 1 0 Phage gene product 45.2 DUF1604 PF07713.13 NODE_45526_length_430_cov_68.329114_g37748_i0reverse_frame_2 - 0.11 12.4 0.3 0.16 11.8 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) WHEP-TRS PF00458.20 NODE_45514_length_430_cov_112.531646_g37736_i0reverse_frame_2 - 0.074 13.2 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 WHEP-TRS domain UPF0147 PF03685.13 NODE_45510_length_430_cov_141.878481_g37732_i0forward_frame_2 - 0.03 14.4 1.2 0.03 14.4 1.2 1.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0147) MFS_1 PF07690.16 NODE_45504_length_430_cov_166.182278_g37726_i0reverse_frame_2 - 7.6e-05 21.8 0.0 7.9e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4687 PF15747.5 NODE_45499_length_430_cov_243.260759_g37721_i0forward_frame_2 - 0.048 14.1 2.3 0.077 13.5 2.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4687) SLATT_2 PF18183.1 NODE_45499_length_430_cov_243.260759_g37721_i0forward_frame_2 - 0.23 11.2 3.8 0.25 11.1 3.1 1.4 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 2 OmdA PF13376.6 NODE_45490_length_430_cov_876.356962_g36198_i1reverse_frame_3 - 0.065 13.3 1.9 0.087 12.8 0.1 2.1 2 0 0 2 2 2 0 Bacteriocin-protection, YdeI or OmpD-Associated PIN_12 PF16289.5 NODE_45490_length_430_cov_876.356962_g36198_i1reverse_frame_3 - 0.14 12.7 12.0 0.16 12.5 8.8 1.9 2 0 0 2 2 2 0 PIN domain Complex1_LYR PF05347.15 NODE_45490_length_430_cov_876.356962_g36198_i1reverse_frame_3 - 1.4 9.1 7.1 8.8 6.5 0.1 3.1 2 1 1 3 3 3 0 Complex 1 protein (LYR family) DUF4187 PF13821.6 NODE_45490_length_430_cov_876.356962_g36198_i1forward_frame_3 - 0.004 16.9 2.4 1.5 8.7 0.7 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4187) zf-LITAF-like PF10601.9 NODE_45489_length_430_cov_1127.192405_g37713_i0reverse_frame_2 - 2.7e-06 27.5 9.8 4.8e-06 26.7 9.8 1.4 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Histidinol_dh PF00815.20 NODE_45489_length_430_cov_1127.192405_g37713_i0forward_frame_3 - 0.14 11.2 0.0 0.16 10.9 0.0 1.0 1 0 0 1 1 1 0 Histidinol dehydrogenase Toxin_GhoT_OrtT PF10753.9 NODE_45481_length_431_cov_1.452020_g37707_i0forward_frame_2 - 0.22 11.8 1.4 1.3 9.4 0.1 2.2 2 0 0 2 2 2 0 Toxin GhoT_OrtT DUF4632 PF15451.6 NODE_45473_length_431_cov_2.694444_g37699_i0reverse_frame_2 - 0.045 13.8 2.6 2.9 8.0 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4632) DUF2883 PF11097.8 NODE_45473_length_431_cov_2.694444_g37699_i0reverse_frame_2 - 0.1 12.7 0.3 6.3 7.0 0.0 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2883) DUF2682 PF10909.8 NODE_45472_length_431_cov_2.785354_g37698_i0forward_frame_3 - 0.021 15.3 3.1 0.21 12.1 1.8 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2682) Topoisom_bac PF01131.20 NODE_45470_length_431_cov_2.939394_g37696_i0reverse_frame_3 - 0.24 10.3 0.0 0.3 10.1 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase DnaJ PF00226.31 NODE_45470_length_431_cov_2.939394_g37696_i0reverse_frame_2 - 0.041 14.0 0.0 0.066 13.4 0.0 1.3 1 0 0 1 1 1 0 DnaJ domain 3HCDH_N PF02737.18 NODE_45469_length_431_cov_2.954545_g37695_i0reverse_frame_2 - 9.7e-31 107.0 0.4 1.2e-30 106.7 0.4 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 NODE_45469_length_431_cov_2.954545_g37695_i0reverse_frame_2 - 4.6e-20 72.0 0.0 7e-20 71.5 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Pectinesterase PF01095.19 NODE_45469_length_431_cov_2.954545_g37695_i0reverse_frame_2 - 0.13 10.9 0.1 0.17 10.6 0.1 1.1 1 0 0 1 1 1 0 Pectinesterase HTH_1 PF00126.27 NODE_45469_length_431_cov_2.954545_g37695_i0forward_frame_3 - 0.046 13.7 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family YdjO PF14169.6 NODE_45462_length_431_cov_4.558081_g37688_i0reverse_frame_2 - 0.079 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Cold-inducible protein YdjO Mucin PF01456.17 NODE_45461_length_431_cov_19.631313_g37687_i0reverse_frame_2 - 0.52 10.3 41.3 0.76 9.8 41.3 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein FSA_C PF10479.9 NODE_45461_length_431_cov_19.631313_g37687_i0reverse_frame_2 - 2.2 6.3 14.6 2.3 6.3 14.6 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF2207 PF09972.9 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_3 - 0.15 10.8 2.5 0.17 10.6 2.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Wzy_C PF04932.15 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_3 - 0.16 11.6 0.7 0.17 11.5 0.7 1.2 1 0 0 1 1 1 0 O-Antigen ligase DUF21 PF01595.20 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_3 - 0.46 10.2 6.9 0.71 9.6 6.9 1.2 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain DUF3043 PF11241.8 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_3 - 2.2 8.3 6.8 2.6 8.0 6.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Apt1 PF10351.9 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_2 - 0.041 12.7 7.0 0.036 12.9 7.0 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Vac14_Fab1_bd PF12755.7 NODE_45454_length_431_cov_84.368687_g37680_i0reverse_frame_2 - 0.0022 18.5 0.4 0.0047 17.5 0.1 1.7 2 1 0 2 2 2 1 Vacuolar 14 Fab1-binding region Adaptin_N PF01602.20 NODE_45454_length_431_cov_84.368687_g37680_i0reverse_frame_2 - 0.0037 15.9 0.0 0.0038 15.8 0.0 1.1 1 0 0 1 1 1 1 Adaptin N terminal region Cys_rich_FGFR PF00839.17 NODE_45454_length_431_cov_84.368687_g37680_i0reverse_frame_2 - 0.0092 16.1 0.0 0.027 14.6 0.0 1.8 1 1 1 2 2 2 1 Cysteine rich repeat Kinesin PF00225.23 NODE_45450_length_431_cov_89.325758_g37676_i0reverse_frame_2 - 5.3e-16 58.4 0.0 6.7e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Apt1 PF10351.9 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 0.11 11.3 11.0 0.11 11.3 11.0 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain PSK PF06404.12 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 0.12 13.4 2.0 0.6 11.2 2.0 2.0 1 1 0 1 1 1 0 Phytosulfokine precursor protein (PSK) Macoilin PF09726.9 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 0.34 9.4 10.5 0.36 9.3 10.5 1.0 1 0 0 1 1 1 0 Macoilin family SPX PF03105.19 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 4.1 7.2 12.4 4.8 7.0 12.4 1.0 1 0 0 1 1 1 0 SPX domain Dicty_REP PF05086.12 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 4.4 5.2 7.7 4.4 5.2 7.7 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein SOG2 PF10428.9 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 4.9 6.2 21.6 5.8 6.0 21.6 1.0 1 0 0 1 1 1 0 RAM signalling pathway protein Hamartin PF04388.12 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 9.5 4.7 13.2 9.4 4.8 13.2 1.0 1 0 0 1 1 1 0 Hamartin protein Coagulase PF08764.10 NODE_45441_length_431_cov_119.800505_g37667_i0forward_frame_2 - 0.013 15.7 2.4 0.015 15.5 2.4 1.2 1 0 0 1 1 1 0 Staphylococcus aureus coagulase DUF2115 PF09888.9 NODE_45441_length_431_cov_119.800505_g37667_i0forward_frame_2 - 0.051 14.1 1.1 0.073 13.6 1.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) Mlh1_C PF16413.5 NODE_45439_length_431_cov_156.207071_g37665_i0reverse_frame_3 - 1.2e-07 31.4 0.0 1.5e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 DNA mismatch repair protein Mlh1 C-terminus DUF3953 PF13129.6 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.0025 17.5 6.2 2.1 8.2 0.1 3.9 4 0 0 4 4 4 2 Protein of unknown function (DUF3953) DUF4910 PF16254.5 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.0058 15.5 1.0 1.6 7.5 0.0 3.5 1 1 3 4 4 4 1 Domain of unknown function (DUF4910) DUF4723 PF15851.5 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.069 13.3 8.6 5.9 7.1 0.1 4.3 5 0 0 5 5 5 0 Domain of unknown function (DUF4723) YiaAB PF05360.14 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.073 13.3 3.5 39 4.6 0.0 3.7 4 0 0 4 4 4 0 yiaA/B two helix domain DUF347 PF03988.12 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.44 10.8 1.8 58 4.0 0.0 3.1 3 0 0 3 3 3 0 Repeat of Unknown Function (DUF347) DUF1538 PF07556.11 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.68 9.2 5.3 1.7 7.9 0.1 2.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1538) Ninjurin PF04923.12 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 2.9 7.9 6.3 42 4.2 0.1 3.4 1 1 2 3 3 3 0 Ninjurin Alginate_exp PF13372.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_3 - 0.0002 20.2 2.2 5.4 5.7 0.0 3.9 4 0 0 4 4 4 3 Alginate export DUF3692 PF12469.8 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_3 - 0.0043 17.3 1.5 42 4.4 0.0 4.5 4 1 1 5 5 5 1 CRISPR-associated protein PanZ PF12568.8 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_3 - 0.01 15.5 0.6 31 4.3 0.0 4.0 3 1 1 4 4 4 0 Acetyltransferase (GNAT) domain, PanZ DUF3084 PF11283.8 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_3 - 0.71 9.9 7.0 66 3.6 0.1 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF3084) Ank_2 PF12796.7 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 1.3e-42 144.2 6.7 4.5e-16 59.2 0.6 2.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 1.5e-30 105.1 2.7 8.6e-09 35.8 0.0 3.2 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 6.1e-25 84.6 0.1 0.00022 21.4 0.0 5.0 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 8.3e-18 64.2 3.4 0.0061 16.8 0.0 4.9 2 2 2 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 9.2e-18 63.8 0.9 0.0043 17.4 0.0 4.9 5 0 0 5 5 5 4 Ankyrin repeat DUF2170 PF09938.9 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.0044 16.7 0.0 9.2 6.0 0.0 3.5 1 1 3 4 4 4 2 Uncharacterized protein conserved in bacteria (DUF2170) DUF1830 PF08865.11 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.011 15.7 0.0 0.69 10.0 0.0 2.7 3 1 1 4 4 4 0 Domain of unknown function (DUF1830) Cyclin_N PF00134.23 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.014 15.2 0.1 20 4.9 0.0 3.4 1 1 3 4 4 4 0 Cyclin, N-terminal domain Acyl-CoA_dh_2 PF08028.11 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.035 14.4 9.9 1 9.7 1.2 3.4 1 1 3 4 4 4 0 Acyl-CoA dehydrogenase, C-terminal domain PUB_1 PF18486.1 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.039 13.8 3.2 10 6.1 0.0 3.9 5 0 0 5 5 5 0 PNGase/UBA- or UBX-containing domain Imm2 PF14426.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.056 13.5 0.2 52 4.0 0.0 3.5 4 0 0 4 4 4 0 Immunity protein Imm2 PEGA PF08308.11 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.083 12.8 0.0 35 4.4 0.0 2.9 3 0 0 3 3 3 0 PEGA domain DUF2560 PF10834.8 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.16 12.2 6.6 15 5.9 0.1 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2560) Paxillin PF03535.13 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 6.3 6.6 5.1 24 4.7 0.0 3.3 1 1 3 4 4 4 0 Paxillin family Arv1 PF04161.13 NODE_45435_length_431_cov_226.479798_g37661_i0forward_frame_3 - 0.04 14.1 5.9 0.044 13.9 5.9 1.1 1 0 0 1 1 1 0 Arv1-like family Calcyon PF06387.11 NODE_45435_length_431_cov_226.479798_g37661_i0forward_frame_2 - 0.74 9.8 3.4 0.91 9.5 0.1 2.0 2 0 0 2 2 2 0 D1 dopamine receptor-interacting protein (calcyon) DUF2523 PF10734.9 NODE_45427_length_431_cov_2640.800505_g36701_i1forward_frame_3 - 0.12 12.9 2.9 7.2 7.3 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2523) GPS2_interact PF15784.5 NODE_45424_length_432_cov_1.259446_g37651_i0reverse_frame_2 - 0.013 15.9 2.2 0.018 15.5 0.3 2.0 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain IL4Ra_N PF09238.10 NODE_45423_length_432_cov_1.599496_g37650_i0forward_frame_2 - 0.0034 17.7 0.9 0.0062 16.8 0.9 1.4 1 0 0 1 1 1 1 Interleukin-4 receptor alpha chain, N-terminal SBP_bac_6 PF13343.6 NODE_45421_length_432_cov_1.664987_g37648_i0reverse_frame_3 - 4e-16 59.2 0.1 4.4e-16 59.0 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 NODE_45421_length_432_cov_1.664987_g37648_i0reverse_frame_3 - 1.2e-14 54.8 0.3 1.3e-14 54.7 0.3 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 NODE_45421_length_432_cov_1.664987_g37648_i0reverse_frame_3 - 7.7e-06 26.1 0.6 8.9e-06 25.9 0.6 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 NODE_45421_length_432_cov_1.664987_g37648_i0reverse_frame_3 - 9.5e-05 22.2 0.0 0.00011 22.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein P21-Arc PF04062.14 NODE_45421_length_432_cov_1.664987_g37648_i0reverse_frame_3 - 0.021 14.9 0.0 0.028 14.4 0.0 1.2 1 0 0 1 1 1 0 ARP2/3 complex ARPC3 (21 kDa) subunit Indigoidine_A PF04227.12 NODE_45417_length_432_cov_1.934509_g37644_i0forward_frame_2 - 0.087 12.2 0.6 0.096 12.0 0.6 1.0 1 0 0 1 1 1 0 Indigoidine synthase A like protein Response_reg PF00072.24 NODE_45416_length_432_cov_2.060453_g37643_i0reverse_frame_3 - 1.6e-05 25.0 0.1 3.5e-05 23.9 0.0 1.6 2 0 0 2 2 2 1 Response regulator receiver domain HATPase_c PF02518.26 NODE_45416_length_432_cov_2.060453_g37643_i0reverse_frame_2 - 5.6e-09 36.5 0.2 2.2e-08 34.6 0.2 1.8 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 NODE_45416_length_432_cov_2.060453_g37643_i0reverse_frame_2 - 0.0017 18.2 0.1 0.0023 17.8 0.1 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YfiO PF13525.6 NODE_45412_length_432_cov_2.609572_g37639_i0reverse_frame_2 - 0.015 15.0 0.3 0.017 14.8 0.3 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein TPR_18 PF13512.6 NODE_45412_length_432_cov_2.609572_g37639_i0reverse_frame_2 - 0.022 14.9 1.1 0.033 14.3 1.0 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat ZZ PF00569.17 NODE_45405_length_432_cov_3.836272_g37632_i0forward_frame_3 - 2.1e-06 27.4 13.2 2.1e-06 27.4 13.2 1.8 2 0 0 2 2 2 1 Zinc finger, ZZ type Bcr-Abl_Oligo PF09036.10 NODE_45405_length_432_cov_3.836272_g37632_i0forward_frame_3 - 0.032 14.2 0.6 0.061 13.3 0.6 1.5 1 1 0 1 1 1 0 Bcr-Abl oncoprotein oligomerisation domain DUF3488 PF11992.8 NODE_45400_length_432_cov_46.088161_g37627_i0reverse_frame_3 - 0.21 10.5 4.4 0.25 10.3 4.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) HTH_3 PF01381.22 NODE_45400_length_432_cov_46.088161_g37627_i0forward_frame_3 - 4.6e-08 33.0 0.0 7.8e-08 32.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 NODE_45400_length_432_cov_46.088161_g37627_i0forward_frame_3 - 0.0028 17.6 0.1 0.005 16.8 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 NODE_45400_length_432_cov_46.088161_g37627_i0forward_frame_3 - 0.0044 16.8 0.0 0.0083 16.0 0.0 1.4 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_26 PF13443.6 NODE_45400_length_432_cov_46.088161_g37627_i0forward_frame_3 - 0.078 13.4 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain GCP_C_terminal PF04130.13 NODE_45397_length_432_cov_63.458438_g37624_i0reverse_frame_3 - 0.0033 17.0 0.9 0.0033 17.0 0.9 1.5 2 0 0 2 2 2 1 Gamma tubulin complex component C-terminal CENP-B_dimeris PF09026.10 NODE_45397_length_432_cov_63.458438_g37624_i0reverse_frame_3 - 0.0074 16.7 6.1 0.0093 16.3 4.3 1.9 2 0 0 2 2 2 1 Centromere protein B dimerisation domain PBP1_TM PF14812.6 NODE_45397_length_432_cov_63.458438_g37624_i0reverse_frame_3 - 0.016 15.5 2.9 0.016 15.5 2.9 1.8 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal NOA36 PF06524.12 NODE_45397_length_432_cov_63.458438_g37624_i0reverse_frame_3 - 0.28 10.5 7.5 0.33 10.2 7.5 1.1 1 0 0 1 1 1 0 NOA36 protein PTPRCAP PF15713.5 NODE_45397_length_432_cov_63.458438_g37624_i0reverse_frame_3 - 0.45 10.8 5.5 0.64 10.3 5.5 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Exonuc_VII_L PF02601.15 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.0036 16.9 10.9 0.0053 16.4 10.8 1.3 1 1 0 1 1 1 1 Exonuclease VII, large subunit Macoilin PF09726.9 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.03 12.9 12.0 0.034 12.7 12.0 1.1 1 0 0 1 1 1 0 Macoilin family ApoO PF09769.9 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.29 11.1 1.7 0.34 10.9 0.6 1.8 1 1 1 2 2 2 0 Apolipoprotein O Golgin_A5 PF09787.9 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.49 9.8 15.2 0.13 11.7 11.9 1.6 1 1 0 1 1 1 0 Golgin subfamily A member 5 FUSC PF04632.12 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.9 8.0 10.5 1.1 7.7 10.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family YabA PF06156.13 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.96 10.1 13.0 12 6.6 8.7 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Spc7 PF08317.11 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.97 8.2 15.4 1.6 7.6 15.4 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein KfrA_N PF11740.8 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 1.5 9.5 15.6 5 7.8 15.5 1.9 1 1 0 1 1 1 0 Plasmid replication region DNA-binding N-term RF-1 PF00472.20 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 1.9 8.5 10.9 3.1 7.8 10.9 1.4 1 0 0 1 1 1 0 RF-1 domain TolA_bind_tri PF16331.5 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 4 7.6 15.6 0.91 9.6 10.5 2.1 2 0 0 2 2 2 0 TolA binding protein trimerisation OmpH PF03938.14 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 5 7.4 17.1 3.9 7.8 14.9 1.8 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) Nup54_C PF18437.1 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 5.4 7.0 9.5 1 9.3 2.8 2.3 2 0 0 2 2 2 0 Nup54 C-terminal interacting domain COG2 PF06148.11 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 5.5 7.1 9.3 2.9 8.0 6.6 1.8 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 APG6_N PF17675.1 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 5.7 7.5 21.3 24 5.4 19.9 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region EF-hand_6 PF13405.6 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 7.6e-08 31.7 0.2 0.022 14.7 0.0 2.7 2 1 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 2.5e-06 27.9 1.7 8.4e-05 22.9 0.4 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 4.9e-06 25.7 2.3 0.013 15.0 0.1 2.8 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 3.8e-05 23.0 4.9 0.21 11.1 0.1 3.6 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 0.00013 21.8 1.7 0.072 13.0 0.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair Glyco_transf_25 PF01755.17 NODE_45377_length_432_cov_158.803526_g37604_i0forward_frame_3 - 3.2e-12 46.7 0.0 8e-12 45.4 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) DUF2957 PF11170.8 NODE_45374_length_432_cov_162.952141_g37601_i0reverse_frame_2 - 0.045 12.6 0.1 0.051 12.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2957) RCC1_2 PF13540.6 NODE_45374_length_432_cov_162.952141_g37601_i0reverse_frame_2 - 0.073 12.9 0.7 14 5.6 0.0 2.4 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat RR_TM4-6 PF06459.12 NODE_45373_length_432_cov_163.123426_g37600_i0reverse_frame_2 - 4.7 7.0 18.2 5.2 6.8 18.2 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF5401 PF17380.2 NODE_45373_length_432_cov_163.123426_g37600_i0reverse_frame_2 - 6.2 4.8 27.1 6 4.8 27.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) U79_P34 PF03064.16 NODE_45373_length_432_cov_163.123426_g37600_i0reverse_frame_2 - 7.2 5.9 24.2 11 5.3 24.2 1.4 1 1 0 1 1 1 0 HSV U79 / HCMV P34 ENT PF03735.14 NODE_45372_length_432_cov_173.443325_g37599_i0reverse_frame_3 - 0.04 14.0 0.5 0.084 12.9 0.5 1.6 1 0 0 1 1 1 0 ENT domain NUDIX PF00293.28 NODE_45371_length_432_cov_181.768262_g37598_i0forward_frame_2 - 1.8e-05 24.8 0.0 2.8e-05 24.2 0.0 1.3 1 1 0 1 1 1 1 NUDIX domain RCC1_2 PF13540.6 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_3 - 0.0011 18.7 7.4 0.32 10.8 0.4 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Glyco_hydro_88 PF07470.13 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_3 - 0.0021 17.2 0.1 2.6 7.0 0.0 2.7 3 0 0 3 3 3 2 Glycosyl Hydrolase Family 88 DUF2664 PF10867.8 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_3 - 0.055 13.9 0.7 28 5.2 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2664) UVR PF02151.19 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_3 - 0.22 11.3 1.2 95 2.9 0.0 3.3 3 0 0 3 3 3 0 UvrB/uvrC motif PSP1 PF04468.12 NODE_45362_length_432_cov_39147.314861_g37591_i0reverse_frame_2 - 0.058 13.7 0.9 0.14 12.4 0.9 1.6 1 0 0 1 1 1 0 PSP1 C-terminal conserved region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks157.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks157.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks157.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks157.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:15 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- 7TM_GPCR_Srab PF10292.9 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_3 - 0.04 12.8 0.3 0.059 12.3 0.2 1.3 1 1 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor zf-RING_2 PF13639.6 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 3.5e-12 46.5 4.6 5.3e-12 45.9 4.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 3.5e-09 36.2 7.4 1.5e-08 34.2 1.9 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 4.3e-09 36.5 3.2 7.5e-09 35.7 3.2 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 1.3e-08 34.7 2.3 2.3e-08 33.9 2.3 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 4e-08 33.0 3.8 7.4e-08 32.1 3.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 6.2e-08 32.4 2.5 1.1e-07 31.6 2.5 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 6.3e-08 32.5 2.5 9e-05 22.4 0.2 2.5 2 0 0 2 2 2 2 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 7.1e-08 32.2 2.9 1.3e-07 31.3 2.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 2.2e-07 30.6 2.8 3.4e-07 30.0 2.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 7.6e-07 29.1 0.8 1.2e-06 28.4 0.8 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.00032 20.3 1.7 0.00053 19.5 1.7 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_4 PF14570.6 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.00063 19.5 1.8 0.001 18.8 1.8 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain FYVE_2 PF02318.16 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.0013 19.0 12.4 0.0013 19.0 11.5 1.4 1 1 1 2 2 2 1 FYVE-type zinc finger RINGv PF12906.7 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.0015 18.7 4.4 0.0035 17.4 4.4 1.7 1 1 0 1 1 1 1 RING-variant domain DUF1644 PF07800.12 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.017 15.2 10.0 0.017 15.2 2.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1644) zf-Nse PF11789.8 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.023 14.5 1.5 0.042 13.7 1.5 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.044 13.9 2.9 0.1 12.8 3.0 1.7 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING-like PF08746.11 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.068 13.5 3.3 0.079 13.3 2.1 1.7 2 0 0 2 2 2 0 RING-like domain FANCL_C PF11793.8 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.086 13.0 6.2 0.72 10.1 5.7 2.6 1 1 1 2 2 2 0 FANCL C-terminal domain zf-RING_6 PF14835.6 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.087 12.7 0.2 0.17 11.8 0.2 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-C3H2C3 PF17122.5 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.22 11.6 4.1 0.52 10.4 4.1 1.6 1 1 0 1 1 1 0 Zinc-finger FYDLN_acid PF09538.10 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 0.57 10.9 5.2 4.3 8.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) LMBR1 PF04791.16 NODE_45361_length_432_cov_48506.340050_g37590_i0forward_frame_2 - 1.8 7.3 3.3 2.1 7.2 3.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein MtrD PF04207.12 ORF97732 - 0.0011 18.8 0.2 0.0014 18.4 0.2 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D DUF4476 PF14771.6 ORF97732 - 0.06 13.7 0.1 0.1 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4476) ERGIC_N PF13850.6 ORF97732 - 0.074 13.4 0.4 0.11 12.8 0.2 1.5 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) CBP_BcsR PF10945.8 ORF95744 - 0.034 13.6 0.7 0.16 11.4 0.2 2.0 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsR DUF2684 PF10885.8 ORF95404 - 0.096 12.8 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) HEPN_Cthe2314 PF18730.1 ORF94338 - 0.086 12.9 6.5 1.1 9.3 6.3 2.2 1 1 0 1 1 1 0 Cthe_2314-like HEPN OGFr_N PF04664.13 ORF9344 - 8.1e-15 54.9 0.0 9.4e-15 54.7 0.0 1.0 1 0 0 1 1 1 1 Opioid growth factor receptor (OGFr) conserved region PrlF_antitoxin PF15937.5 ORF9344 - 0.2 12.1 0.0 0.31 11.5 0.0 1.2 1 0 0 1 1 1 0 prlF antitoxin for toxin YhaV_toxin Thioredoxin_8 PF13905.6 ORF93279 - 0.00068 19.9 0.0 0.00089 19.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 ORF93279 - 0.0058 16.6 0.0 0.0098 15.9 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF93279 - 0.06 13.8 0.1 0.067 13.6 0.1 1.3 1 1 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF93242 - 0.00068 19.9 0.0 0.00089 19.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 ORF93242 - 0.0058 16.6 0.0 0.0098 15.9 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF93242 - 0.06 13.8 0.1 0.067 13.6 0.1 1.3 1 1 0 1 1 1 0 Thioredoxin-like domain FliE PF02049.18 ORF93031 - 1.1 9.5 3.5 7.1 6.8 0.4 2.4 1 1 1 2 2 2 0 Flagellar hook-basal body complex protein FliE Deltaretro_Tax PF05599.11 ORF92532 - 0.2 12.2 2.4 0.26 11.9 0.4 2.0 1 1 1 2 2 2 0 Deltaretrovirus Tax protein Glyco_transf_90 PF05686.12 ORF90911 - 1.2e-15 57.3 0.0 1.7e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 90 Glyco_trans_1_2 PF13524.6 ORF90911 - 0.004 17.5 0.0 0.0065 16.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 BRK PF07533.16 ORF9055 - 0.14 11.8 0.0 0.29 10.8 0.0 1.5 1 0 0 1 1 1 0 BRK domain EF-hand_1 PF00036.32 ORF90497 - 3.2e-19 67.0 4.6 2.3e-05 23.6 0.0 3.4 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF90497 - 4.3e-15 54.3 0.4 4.6e-06 26.1 0.0 3.5 3 0 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF90497 - 7.6e-15 55.1 0.5 1e-09 38.7 0.4 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF90497 - 3.3e-11 42.9 2.8 0.00058 19.7 0.5 3.1 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF90497 - 3.9e-10 38.7 3.7 0.00016 21.0 0.0 3.7 3 1 0 3 3 3 2 EF hand EF-hand_4 PF12763.7 ORF90497 - 0.00013 21.8 4.5 0.11 12.4 0.1 2.7 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF90497 - 0.0033 17.7 0.0 0.0075 16.6 0.0 1.6 2 0 0 2 2 2 1 EF-hand domain tRNA_synt_1c_R1 PF04558.15 ORF90497 - 0.037 14.0 0.0 0.045 13.8 0.0 1.1 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 SPARC_Ca_bdg PF10591.9 ORF90497 - 0.12 12.7 0.2 12 6.3 0.0 2.2 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region ARTD15_N PF18084.1 ORF90230 - 0.041 14.1 0.0 0.058 13.6 0.0 1.3 1 0 0 1 1 1 0 ARTD15 N-terminal domain Asp PF00026.23 ORF88855 - 9.7e-14 51.5 0.2 1.2e-13 51.2 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF88855 - 6.1e-06 26.6 0.2 8.3e-06 26.1 0.2 1.2 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal PTS_EIIA_2 PF00359.22 ORF88004 - 1e-23 83.9 0.0 1.1e-23 83.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Sterol_MT_C PF08498.10 ORF87775 - 1e-15 57.7 0.0 1.5e-15 57.2 0.0 1.2 1 0 0 1 1 1 1 Sterol methyltransferase C-terminal PET PF06297.14 ORF8767 - 0.022 15.0 0.7 0.093 13.1 0.1 2.1 1 1 1 2 2 2 0 PET Domain CCDC14 PF15254.6 ORF87041 - 0.29 9.7 1.3 0.35 9.5 1.3 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 DUF4162 PF13732.6 ORF86920 - 0.036 14.8 0.4 0.091 13.5 0.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4162) DUF2524 PF10732.9 ORF86920 - 0.049 13.9 0.7 0.12 12.7 0.7 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2524) MBF1 PF08523.10 ORF86578 - 7.9e-20 71.1 1.2 7.9e-20 71.1 1.2 1.6 2 0 0 2 2 2 1 Multiprotein bridging factor 1 HTH_3 PF01381.22 ORF86578 - 6.3e-11 42.2 0.3 1.1e-10 41.4 0.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 ORF86578 - 4.8e-05 23.6 0.0 8.6e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 ORF86578 - 0.00094 19.2 0.1 0.0015 18.5 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Ribosomal_L19e PF01280.20 ORF86079 - 0.034 14.2 0.1 0.051 13.6 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L19e Peptidase_M3 PF01432.20 ORF85592 - 3e-19 69.6 0.0 3.2e-19 69.5 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 Anillin_N PF16018.5 ORF84458 - 0.081 13.5 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Anillin N-terminus Toxin_12 PF07740.12 ORF84458 - 0.72 10.6 5.8 0.45 11.3 1.1 2.7 3 0 0 3 3 3 0 Ion channel inhibitory toxin Thr_dehydrat_C PF00585.18 ORF83739 - 0.054 13.3 0.0 0.091 12.5 0.0 1.4 1 0 0 1 1 1 0 C-terminal regulatory domain of Threonine dehydratase DegQ PF08181.11 ORF83739 - 7.8 6.7 6.8 0.93 9.6 0.6 2.6 2 2 1 3 3 3 0 DegQ (SacQ) family WD40 PF00400.32 ORF83513 - 0.00015 22.5 0.2 0.00041 21.1 0.1 1.8 2 0 0 2 2 2 1 WD domain, G-beta repeat FAM183 PF14886.6 ORF83164 - 0.0096 16.6 0.1 0.014 16.1 0.1 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related DUF4710 PF15828.5 ORF81398 - 7.8 6.7 10.8 0.89 9.7 5.4 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4710) FAM209 PF15206.6 ORF80719 - 0.23 11.3 1.6 0.27 11.0 0.2 1.7 2 0 0 2 2 2 0 FAM209 family Thr_dehydrat_C PF00585.18 ORF80248 - 0.054 13.3 0.0 0.091 12.5 0.0 1.4 1 0 0 1 1 1 0 C-terminal regulatory domain of Threonine dehydratase DegQ PF08181.11 ORF80248 - 7.8 6.7 6.8 0.93 9.6 0.6 2.6 2 2 1 3 3 3 0 DegQ (SacQ) family TPR_1 PF00515.28 ORF79937 - 1.9e-05 24.3 0.5 1.9e-05 24.3 0.5 3.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF79937 - 0.00013 22.2 0.5 0.0056 17.0 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF79937 - 0.001 19.1 0.5 0.001 19.1 0.5 3.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF79937 - 0.0011 18.9 0.3 0.0011 18.9 0.3 2.7 4 0 0 4 4 4 1 Tetratricopeptide repeat MIT PF04212.18 ORF79937 - 0.028 14.5 1.7 0.22 11.6 0.1 2.8 2 1 0 2 2 2 0 MIT (microtubule interacting and transport) domain EIF_2_alpha PF07541.12 ORF79937 - 0.044 13.9 0.8 0.059 13.5 0.8 1.3 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit TPR_10 PF13374.6 ORF79937 - 0.072 13.0 0.3 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF433 PF04255.14 ORF79937 - 0.077 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF433) SapB_1 PF05184.15 ORF79937 - 0.22 11.6 0.2 0.22 11.6 0.2 1.8 2 0 0 2 2 2 0 Saposin-like type B, region 1 DcuC PF03606.15 ORF79389 - 0.00019 20.0 0.0 0.00021 19.9 0.0 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier EpsG PF14897.6 ORF79389 - 0.027 13.8 6.6 0.056 12.7 6.6 1.5 1 1 0 1 1 1 0 EpsG family 7tm_1 PF00001.21 ORF79389 - 0.11 11.8 0.0 0.16 11.3 0.0 1.4 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) Apt1 PF10351.9 ORF79259 - 0.033 13.0 12.7 0.039 12.8 12.7 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Mit_KHE1 PF10173.9 ORF79259 - 1 9.4 5.8 1.2 9.2 5.8 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Peptidase_C37 PF05416.12 ORF79259 - 3.7 5.9 7.7 4 5.8 7.7 1.1 1 0 0 1 1 1 0 Southampton virus-type processing peptidase Herpes_U47 PF05467.11 ORF78707 - 0.72 7.9 2.0 1.1 7.3 2.0 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 Herpes_U47 PF05467.11 ORF77249 - 0.72 7.9 2.0 1.1 7.3 2.0 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 S_4TM PF18159.1 ORF76220 - 0.12 11.7 2.3 0.16 11.3 2.3 1.2 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain CBP_BcsG PF11658.8 ORF76220 - 0.22 9.9 4.9 0.26 9.6 4.9 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG Trp_oprn_chp PF09534.10 ORF76220 - 0.35 10.6 12.9 0.45 10.3 12.9 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF3487 PF11990.8 ORF76220 - 0.56 10.1 9.0 0.8 9.6 9.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) RIB43A PF05914.12 ORF75607 - 3.6e-14 52.3 10.8 4.5e-14 52.0 10.8 1.0 1 0 0 1 1 1 1 RIB43A NolX PF05819.11 ORF75607 - 0.01 15.2 4.1 0.012 15.0 4.1 1.2 1 0 0 1 1 1 1 NolX protein TPR_1 PF00515.28 ORF7409 - 1.9e-05 24.3 0.5 1.9e-05 24.3 0.5 3.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF7409 - 0.00013 22.2 0.5 0.0056 17.0 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF7409 - 0.001 19.1 0.5 0.001 19.1 0.5 3.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF7409 - 0.0011 18.9 0.3 0.0011 18.9 0.3 2.7 4 0 0 4 4 4 1 Tetratricopeptide repeat MIT PF04212.18 ORF7409 - 0.028 14.5 1.7 0.22 11.6 0.1 2.8 2 1 0 2 2 2 0 MIT (microtubule interacting and transport) domain EIF_2_alpha PF07541.12 ORF7409 - 0.044 13.9 0.8 0.059 13.5 0.8 1.3 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit TPR_10 PF13374.6 ORF7409 - 0.072 13.0 0.3 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF433 PF04255.14 ORF7409 - 0.077 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF433) SapB_1 PF05184.15 ORF7409 - 0.22 11.6 0.2 0.22 11.6 0.2 1.8 2 0 0 2 2 2 0 Saposin-like type B, region 1 Luciferase_cat PF10285.9 ORF72776 - 0.11 11.9 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Luciferase catalytic domain CBP_BcsR PF10945.8 ORF72317 - 0.034 13.6 0.7 0.16 11.4 0.2 2.0 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsR Pkinase PF00069.25 ORF71225 - 5.9e-20 71.7 0.3 6.9e-20 71.5 0.3 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF71225 - 7.7e-13 48.3 0.0 9e-13 48.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF71225 - 8.5e-06 25.3 0.0 1.5e-05 24.5 0.0 1.3 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF71225 - 0.00015 20.7 0.0 0.00017 20.5 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF71225 - 0.00061 19.8 0.0 0.00072 19.5 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF71225 - 0.0081 15.5 0.0 0.0091 15.4 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF71225 - 0.011 14.8 0.0 0.013 14.6 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 YrbL-PhoP_reg PF10707.9 ORF71225 - 0.048 13.2 0.3 0.068 12.7 0.2 1.5 1 1 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase PF00069.25 ORF70870 - 1.4e-05 24.7 0.0 1.8e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_C PF00433.24 ORF70870 - 0.049 14.3 0.7 0.089 13.5 0.7 1.4 1 0 0 1 1 1 0 Protein kinase C terminal domain SKA2 PF16740.5 ORF7009 - 0.0017 18.1 4.7 0.0017 18.1 4.7 1.6 1 1 1 2 2 2 1 Spindle and kinetochore-associated protein 2 CBP_BcsR PF10945.8 ORF69858 - 0.034 13.6 0.7 0.16 11.4 0.2 2.0 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsR Sugar_tr PF00083.24 ORF67888 - 0.0051 15.7 4.8 0.095 11.5 0.6 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter DUF2207 PF09972.9 ORF67888 - 0.01 14.6 0.5 0.013 14.3 0.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2219 PF09982.9 ORF67888 - 0.13 11.6 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2219) EMC3_TMCO1 PF01956.16 ORF6594 - 0.087 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like T4SS PF07996.11 ORF65576 - 0.013 15.9 0.1 0.016 15.6 0.1 1.1 1 0 0 1 1 1 0 Type IV secretion system proteins Mei5_like PF17021.5 ORF65576 - 0.014 15.5 1.3 0.019 15.0 1.3 1.3 1 0 0 1 1 1 0 Putative double-strand recombination repair-like Syntaxin_2 PF14523.6 ORF65576 - 0.025 14.9 1.7 0.05 14.0 1.5 1.7 1 1 0 1 1 1 0 Syntaxin-like protein DUF5471 PF17565.2 ORF65576 - 0.026 14.8 0.0 0.042 14.1 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5471) DUF2951 PF11166.8 ORF65576 - 0.078 13.2 0.6 0.11 12.7 0.2 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) CLP_protease PF00574.23 ORF65576 - 0.11 12.4 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 Clp protease DCX PF03607.17 ORF65576 - 0.11 12.6 0.0 5 7.3 0.0 2.6 2 1 0 2 2 2 0 Doublecortin Herpes_U47 PF05467.11 ORF65490 - 0.72 7.9 2.0 1.1 7.3 2.0 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 SNARE PF05739.19 ORF6418 - 5.7e-06 26.2 0.5 1.3e-05 25.0 0.0 1.9 2 0 0 2 2 2 1 SNARE domain CBAH PF02275.18 ORF6418 - 0.0073 16.0 2.0 0.0081 15.8 2.0 1.2 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family CENP-N PF05238.13 ORF6418 - 0.016 14.5 0.6 0.019 14.3 0.6 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like OPA3 PF07047.12 ORF6418 - 0.065 13.0 0.5 0.11 12.3 0.3 1.4 1 1 0 1 1 1 0 Optic atrophy 3 protein (OPA3) DUF1451 PF07295.11 ORF6418 - 0.12 12.4 3.0 0.16 12.0 3.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain YscO-like PF16789.5 ORF6418 - 0.51 10.4 9.8 0.67 10.0 9.8 1.3 1 0 0 1 1 1 0 YscO-like protein Synaptobrevin PF00957.21 ORF6418 - 0.8 9.5 8.8 0.34 10.7 5.8 1.9 1 1 0 1 1 1 0 Synaptobrevin HAUS6_N PF14661.6 ORF6418 - 0.95 9.0 6.2 1.2 8.7 6.2 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus KELK PF15796.5 ORF6418 - 2.2 8.8 8.0 1.1 9.8 1.4 2.4 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase FAM76 PF16046.5 ORF6418 - 3.1 7.1 8.3 3.9 6.7 8.3 1.0 1 0 0 1 1 1 0 FAM76 protein SNARE PF05739.19 ORF63177 - 0.017 15.1 0.5 0.027 14.5 0.5 1.3 1 0 0 1 1 1 0 SNARE domain GlpM PF06942.12 ORF63177 - 0.018 15.5 2.1 0.024 15.0 2.1 1.3 1 0 0 1 1 1 0 GlpM protein PrgI PF12666.7 ORF63177 - 0.3 11.8 2.3 2.3 9.0 0.2 2.1 2 0 0 2 2 2 0 PrgI family protein OsmC PF02566.19 ORF62871 - 4.1e-19 68.9 0.1 5.4e-19 68.5 0.1 1.1 1 0 0 1 1 1 1 OsmC-like protein EELM2 PF15863.5 ORF62276 - 0.1 12.7 0.3 0.13 12.4 0.3 1.3 1 0 0 1 1 1 0 Extended EGL-27 and MTA1 homology domain DUF2694 PF10904.8 ORF61773 - 0.24 11.5 1.6 0.46 10.6 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2694) ADIP PF11559.8 ORF61135 - 9.7e-15 55.0 14.6 1.1e-14 54.8 14.6 1.0 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF4403 PF14356.6 ORF61135 - 0.031 13.0 4.2 0.38 9.4 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4403) HrpB7 PF09486.10 ORF61135 - 0.051 14.0 6.7 1.1 9.7 0.7 2.1 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) Seadorna_VP6 PF07407.11 ORF61135 - 1.3 7.9 10.4 0.93 8.4 9.0 1.5 1 1 0 1 1 1 0 Seadornavirus VP6 protein DUF4407 PF14362.6 ORF61135 - 9.3 5.5 10.1 11 5.3 10.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Fe_bilin_red PF05996.12 ORF60765 - 0.065 12.9 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Ferredoxin-dependent bilin reductase Pkinase PF00069.25 ORF59988 - 1e-12 48.0 0.0 1.4e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF59988 - 0.00024 20.5 0.0 0.00031 20.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase SesA PF17107.5 ORF59860 - 0.0034 17.6 0.7 0.0046 17.1 0.7 1.2 1 0 0 1 1 1 1 N-terminal domain on NACHT_NTPase and P-loop NTPases P16-Arc PF04699.14 ORF59860 - 0.8 10.2 4.1 0.16 12.4 0.2 1.7 2 0 0 2 2 2 0 ARP2/3 complex 16 kDa subunit (p16-Arc) DUF1476 PF07345.11 ORF59637 - 0.0089 16.4 5.2 49 4.4 0.0 4.7 2 2 3 5 5 5 3 ATPase inhibitor subunit zeta AMP-binding PF00501.28 ORF59398 - 1.3e-14 53.6 0.0 1.3e-14 53.6 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme O-FucT PF10250.9 ORF58934 - 3.6e-09 36.8 0.2 1.5e-08 34.7 0.2 1.7 1 1 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase ATP-gua_Ptrans PF00217.19 ORF58387 - 0.0011 18.5 0.0 0.0015 18.1 0.0 1.1 1 0 0 1 1 1 1 ATP:guanido phosphotransferase, C-terminal catalytic domain Dpy-30 PF05186.13 ORF58387 - 0.062 13.0 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Dpy-30 motif Peptidase_S13 PF02113.15 ORF58387 - 0.12 11.1 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 D-Ala-D-Ala carboxypeptidase 3 (S13) family DcuC PF03606.15 ORF574 - 0.00019 20.0 0.0 0.00021 19.9 0.0 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier EpsG PF14897.6 ORF574 - 0.027 13.8 6.6 0.056 12.7 6.6 1.5 1 1 0 1 1 1 0 EpsG family 7tm_1 PF00001.21 ORF574 - 0.11 11.8 0.0 0.16 11.3 0.0 1.4 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) ADPrib_exo_Tox PF03496.14 ORF5534 - 0.038 13.3 0.2 0.045 13.1 0.2 1.1 1 0 0 1 1 1 0 ADP-ribosyltransferase exoenzyme DUF2804 PF10974.8 ORF5534 - 0.078 12.5 0.1 0.23 11.0 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2804) DUF3144 PF11342.8 ORF5341 - 0.082 13.2 0.0 0.15 12.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3144) CtsR_C PF17727.1 ORF5341 - 0.12 12.5 0.0 0.22 11.7 0.0 1.4 1 0 0 1 1 1 0 CtsR C-terminal dimerization domain RRM_1 PF00076.22 ORF53023 - 1.3e-10 41.0 0.0 1.8e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF53023 - 0.07 13.3 0.0 0.097 12.8 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif Peptidase_C26 PF07722.13 ORF52683 - 2.7e-09 37.1 0.0 3.8e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase C26 Med25_VWA PF11265.8 ORF52683 - 0.056 13.3 0.0 0.44 10.3 0.0 1.9 2 0 0 2 2 2 0 Mediator complex subunit 25 von Willebrand factor type A Sugar_tr PF00083.24 ORF51862 - 0.0051 15.7 4.8 0.095 11.5 0.6 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter DUF2207 PF09972.9 ORF51862 - 0.01 14.6 0.5 0.013 14.3 0.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2219 PF09982.9 ORF51862 - 0.13 11.6 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2219) Pkinase PF00069.25 ORF51816 - 6.5e-44 150.3 1.0 6.9e-44 150.2 1.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF51816 - 5e-24 85.0 0.1 6.3e-24 84.7 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF51816 - 2.8e-05 23.1 0.0 3.6e-05 22.7 0.0 1.2 1 1 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF51816 - 6.8e-05 22.5 0.5 8.2e-05 22.3 0.5 1.1 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 ORF51816 - 0.00011 22.2 0.0 0.0016 18.4 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF51816 - 0.00015 21.2 0.1 0.00019 20.9 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF51816 - 0.0012 18.2 0.0 0.0013 18.2 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Choline_kinase PF01633.20 ORF51816 - 0.0028 17.3 0.4 0.0042 16.7 0.4 1.4 1 1 0 1 1 1 1 Choline/ethanolamine kinase Pox_ser-thr_kin PF05445.11 ORF51816 - 0.0078 15.2 4.9 0.008 15.2 0.6 2.0 1 1 1 2 2 2 1 Poxvirus serine/threonine protein kinase YrbL-PhoP_reg PF10707.9 ORF51816 - 0.024 14.2 0.3 0.032 13.8 0.3 1.4 1 1 0 1 1 1 0 PhoP regulatory network protein YrbL OB_NTP_bind PF07717.16 ORF49570 - 2.7e-21 75.7 0.0 3.9e-21 75.2 0.0 1.2 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold OSTbeta PF15048.6 ORF49045 - 0.85 9.8 5.5 0.27 11.4 0.5 2.1 1 1 1 2 2 2 0 Organic solute transporter subunit beta protein NBP1 PF08537.10 ORF48331 - 0.052 12.9 4.0 0.059 12.8 4.0 1.2 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 IFT57 PF10498.9 ORF48331 - 0.057 12.4 5.7 0.076 12.0 5.7 1.4 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 Rep_4 PF05797.11 ORF48331 - 0.058 12.5 1.3 0.07 12.2 1.3 1.1 1 0 0 1 1 1 0 Yeast trans-acting factor (REP1/REP2) Phage_GP20 PF06810.11 ORF48331 - 2.1 8.2 10.2 3.4 7.5 7.3 2.3 1 1 1 2 2 2 0 Phage minor structural protein GP20 DUF2203 PF09969.9 ORF48331 - 3.5 8.4 9.5 2 9.1 0.9 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) PRKG1_interact PF15898.5 ORF48331 - 9.3 7.2 12.1 2 9.3 5.8 2.1 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DUF569 PF04601.13 ORF47593 - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF569) eRF1_3 PF03465.15 ORF47379 - 4e-27 94.9 0.1 5e-27 94.6 0.1 1.1 1 0 0 1 1 1 1 eRF1 domain 3 CdvA PF18822.1 ORF46948 - 0.0081 16.0 1.2 0.018 14.9 0.8 1.9 1 1 1 2 2 2 1 CdvA-like coiled-coil domain MSP7_C PF12948.7 ORF46948 - 0.016 15.9 3.2 0.02 15.5 3.2 1.2 1 0 0 1 1 1 0 MSP7-like protein C-terminal domain Med9 PF07544.13 ORF46948 - 0.098 12.8 0.3 8.8 6.5 0.1 2.3 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 THF_DHG_CYH PF00763.23 ORF45990 - 0.026 14.8 1.0 0.066 13.5 1.0 1.8 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OsmC PF02566.19 ORF45990 - 0.22 12.0 0.4 0.59 10.7 0.2 1.7 1 1 1 2 2 2 0 OsmC-like protein MFS_1 PF07690.16 ORF45060 - 3.1e-10 39.5 3.4 3.9e-10 39.2 3.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF45060 - 0.00011 21.2 0.3 0.00014 20.9 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 ORF45060 - 0.00012 21.0 0.1 0.00013 21.0 0.1 1.1 1 0 0 1 1 1 1 MFS_1 like family TRI12 PF06609.13 ORF45060 - 0.0013 17.3 0.1 0.0014 17.1 0.1 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) ATG22 PF11700.8 ORF45060 - 0.061 11.9 0.1 0.081 11.5 0.1 1.2 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like MFS_3 PF05977.13 ORF45060 - 0.17 10.2 2.1 0.4 9.0 2.1 1.6 1 1 0 1 1 1 0 Transmembrane secretion effector FUSC-like PF12805.7 ORF45060 - 0.32 10.0 1.3 0.51 9.4 0.4 1.6 2 0 0 2 2 2 0 FUSC-like inner membrane protein yccS DUF4407 PF14362.6 ORF43934 - 1.2 8.4 5.4 1.6 8.0 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ALMT PF11744.8 ORF43934 - 4.9 5.9 9.4 6.2 5.5 9.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter UCH PF00443.29 ORF42055 - 2.2e-08 33.9 0.0 2.6e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase TetR_C_20 PF17925.1 ORF42015 - 0.039 14.3 0.2 5.3 7.4 0.1 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PsbW PF07123.12 ORF42015 - 0.063 13.3 0.1 0.08 13.0 0.1 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) C2-set_2 PF08205.12 ORF41324 - 0.0054 16.8 0.0 0.0073 16.4 0.0 1.1 1 0 0 1 1 1 1 CD80-like C2-set immunoglobulin domain DUF5529 PF17669.1 ORF41236 - 0.36 10.8 5.1 0.26 11.3 3.5 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5529) Thioredoxin PF00085.20 ORF41070 - 7.1e-18 64.5 0.0 8.8e-18 64.2 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 ORF41070 - 0.00064 19.2 0.1 0.00091 18.7 0.1 1.3 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF41070 - 0.0027 18.1 0.6 0.054 14.0 0.6 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_4 PF13462.6 ORF41070 - 0.0027 17.9 0.1 0.0058 16.8 0.2 1.5 1 1 1 2 2 2 1 Thioredoxin TraF PF13728.6 ORF41070 - 0.012 15.4 0.0 0.027 14.3 0.0 1.6 1 1 0 1 1 1 0 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF41070 - 0.034 14.5 0.0 0.14 12.5 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin-like DSBA PF01323.20 ORF41070 - 0.2 11.4 0.1 6.6 6.5 0.1 2.1 2 0 0 2 2 2 0 DSBA-like thioredoxin domain Ank_4 PF13637.6 ORF40505 - 1.2e-12 48.1 0.0 0.0019 18.8 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF40505 - 8.8e-10 39.1 0.0 8e-05 23.2 0.0 2.4 1 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF40505 - 9.5e-10 37.9 0.0 0.019 15.5 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF40505 - 2.5e-05 24.5 0.0 0.58 10.7 0.0 3.5 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF40505 - 0.00023 21.4 0.2 0.052 13.9 0.0 2.8 2 2 0 2 2 2 1 Ankyrin repeats (many copies) WD40 PF00400.32 ORF40251 - 0.00015 22.5 0.2 0.00041 21.1 0.1 1.8 2 0 0 2 2 2 1 WD domain, G-beta repeat UvrD-helicase PF00580.21 ORF39546 - 0.16 11.4 18.6 0.19 11.2 18.6 1.0 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain SMC_ScpA PF02616.14 ORF39546 - 0.69 9.8 16.5 0.85 9.5 16.5 1.1 1 0 0 1 1 1 0 Segregation and condensation protein ScpA Hist_deacetyl PF00850.19 ORF39546 - 9.7 5.6 7.0 11 5.4 7.0 1.1 1 0 0 1 1 1 0 Histone deacetylase domain UQ_con PF00179.26 ORF39116 - 1.4e-48 164.1 0.1 1.6e-48 163.9 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF39116 - 0.058 13.1 0.0 0.065 12.9 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family B UFC1 PF08694.11 ORF39116 - 0.088 12.4 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-fold modifier-conjugating enzyme 1 MYO10_CC PF16735.5 ORF38339 - 0.12 12.5 0.2 5.1 7.3 0.1 2.2 2 0 0 2 2 2 0 Unconventional myosin-X coiled coil domain UPF0172 PF03665.13 ORF37990 - 2.7e-17 63.5 0.0 2.9e-17 63.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0172) WWE PF02825.20 ORF37001 - 3.2e-12 46.8 0.1 5.1e-12 46.2 0.1 1.3 1 0 0 1 1 1 1 WWE domain HECT PF00632.25 ORF37001 - 1.8e-07 31.0 0.0 1.9e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Golgin_A5 PF09787.9 ORF36482 - 0.23 10.9 9.6 0.25 10.8 9.6 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 Noggin PF05806.12 ORF36482 - 0.27 11.1 2.6 0.32 10.9 2.6 1.2 1 0 0 1 1 1 0 Noggin DUF3385 PF11865.8 ORF36482 - 0.28 11.1 3.1 0.36 10.7 3.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) DUF3437 PF11919.8 ORF35367 - 0.026 14.4 0.0 0.077 12.9 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3437) Frigida PF07899.11 ORF35367 - 0.03 13.6 0.9 0.044 13.1 0.4 1.5 1 1 0 1 1 1 0 Frigida-like protein CTD_bind PF04818.13 ORF35367 - 0.14 13.0 0.0 0.65 10.9 0.0 2.0 1 1 1 2 2 2 0 RNA polymerase II-binding domain. CheB_methylest PF01339.17 ORF35367 - 0.15 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 CheB methylesterase HAD_SAK_2 PF18143.1 ORF35042 - 3.6e-20 72.7 0.1 4.3e-20 72.5 0.1 1.0 1 0 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins UspA1_rep PF18792.1 ORF35042 - 0.17 12.5 0.5 0.28 11.7 0.5 1.4 1 0 0 1 1 1 0 Ubiquitous surface protein adhesin repeat Pribosyltran PF00156.27 ORF34834 - 9.9e-21 73.9 0.1 1.1e-20 73.7 0.1 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF34834 - 0.075 12.5 0.0 0.082 12.3 0.0 1.1 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase DUF2510 PF10708.9 ORF33402 - 0.092 12.5 1.5 0.14 11.9 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2510) Sec16 PF12932.7 ORF33402 - 0.097 13.3 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region LRRC37AB_C PF14914.6 ORF30939 - 0.0012 18.8 1.0 0.0012 18.8 1.0 2.0 1 1 1 2 2 2 1 LRRC37A/B like protein 1 C-terminal domain Endomucin PF07010.12 ORF30939 - 0.017 15.2 7.5 0.023 14.7 7.5 1.2 1 0 0 1 1 1 0 Endomucin RIFIN PF02009.16 ORF30939 - 0.033 14.1 3.5 0.043 13.7 3.5 1.1 1 0 0 1 1 1 0 Rifin UL45 PF05473.12 ORF30939 - 0.076 12.6 0.2 0.076 12.6 0.2 1.5 2 1 0 2 2 2 0 UL45 protein, carbohydrate-binding C-type lectin-like EVI2A PF05399.11 ORF30939 - 0.26 10.9 7.9 0.55 9.8 7.9 1.5 1 1 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Zip PF02535.22 ORF30939 - 0.33 10.1 2.9 0.56 9.4 2.9 1.5 1 1 0 1 1 1 0 ZIP Zinc transporter ABC2_membrane_3 PF12698.7 ORF30939 - 0.73 8.9 12.2 0.91 8.6 12.2 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4064 PF13273.6 ORF30939 - 0.77 10.1 9.5 2.1 8.7 9.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) TMEM154 PF15102.6 ORF30939 - 2.5 8.0 14.2 0.027 14.4 4.7 2.1 1 1 1 2 2 2 0 TMEM154 protein family MaAIMP_sms PF16951.5 ORF30939 - 5 6.9 7.8 8.8 6.1 7.8 1.4 1 0 0 1 1 1 0 Putative methionine and alanine importer, small subunit MSP7_C PF12948.7 ORF30853 - 0.009 16.7 1.5 0.012 16.3 1.5 1.2 1 0 0 1 1 1 1 MSP7-like protein C-terminal domain AMP-binding_C_2 PF14535.6 ORF30853 - 0.028 14.7 0.2 0.051 13.9 0.1 1.6 2 0 0 2 2 2 0 AMP-binding enzyme C-terminal domain MGS PF02142.22 ORF30853 - 0.033 14.4 0.0 0.049 13.8 0.0 1.3 1 0 0 1 1 1 0 MGS-like domain CdvA PF18822.1 ORF30853 - 0.039 13.8 0.5 0.066 13.0 0.5 1.6 1 0 0 1 1 1 0 CdvA-like coiled-coil domain DUF5344 PF17279.2 ORF30853 - 0.073 13.7 0.3 0.1 13.2 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5344) CaMKII_AD PF08332.10 ORF30479 - 9.5e-19 67.8 0.0 1.3e-18 67.4 0.0 1.2 1 0 0 1 1 1 1 Calcium/calmodulin dependent protein kinase II association domain SnoaL_3 PF13474.6 ORF30479 - 0.0066 16.7 0.1 0.01 16.1 0.1 1.1 1 0 0 1 1 1 1 SnoaL-like domain BSP_II PF05432.11 ORF29993 - 0.039 13.7 0.2 0.047 13.4 0.2 1.1 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) Ketoacyl-synt_2 PF13723.6 ORF29262 - 0.14 11.8 0.5 0.2 11.2 0.5 1.2 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain Rota_NSP4 PF01452.16 ORF29262 - 0.53 9.9 6.7 6.7 6.4 0.1 2.0 2 0 0 2 2 2 0 Rotavirus non structural protein UPF0242 PF06785.11 ORF29262 - 2.1 8.4 5.5 2.7 8.1 5.5 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Consortin_C PF15281.6 ORF29262 - 4.8 7.2 7.9 12 6.0 1.3 2.4 1 1 1 2 2 2 0 Consortin C-terminus Ribosomal_60s PF00428.19 ORF29160 - 6.8 7.4 13.1 13 6.5 13.1 1.4 1 0 0 1 1 1 0 60s Acidic ribosomal protein C2-set_2 PF08205.12 ORF28873 - 0.0054 16.8 0.0 0.0073 16.4 0.0 1.1 1 0 0 1 1 1 1 CD80-like C2-set immunoglobulin domain Sugar_tr PF00083.24 ORF26781 - 1.9e-09 36.9 0.8 6.2e-08 31.9 0.7 2.0 1 1 0 1 1 1 1 Sugar (and other) transporter Folate_carrier PF01770.18 ORF26781 - 0.068 11.9 0.0 0.076 11.7 0.0 1.1 1 0 0 1 1 1 0 Reduced folate carrier Methyltransf_24 PF13578.6 ORF25695 - 1.4e-09 38.9 0.4 2e-09 38.4 0.1 1.4 2 0 0 2 2 2 1 Methyltransferase domain DUF5385 PF17359.2 ORF25628 - 0.044 13.3 2.2 0.7 9.4 0.1 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5385) DZR PF12773.7 ORF23620 - 0.0043 17.0 0.5 0.0069 16.4 0.5 1.4 1 0 0 1 1 1 1 Double zinc ribbon DUF5387 PF17361.2 ORF23620 - 0.014 15.1 0.2 0.017 14.8 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5387) zinc_ribbon_2 PF13240.6 ORF23620 - 0.036 13.8 7.5 0.1 12.4 7.5 1.8 1 1 0 1 1 1 0 zinc-ribbon domain zf_UBZ PF18439.1 ORF23620 - 0.11 12.1 0.9 2 8.1 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 ORF23620 - 0.18 11.3 9.0 1 8.9 9.0 2.1 1 1 0 1 1 1 0 zinc-ribbon domain PVL_ORF50 PF07768.11 ORF23169 - 0.0011 19.3 1.6 0.0011 19.3 1.6 1.7 1 1 1 2 2 2 1 PVL ORF-50-like family UPF0242 PF06785.11 ORF23169 - 0.021 15.0 6.3 0.021 15.0 6.3 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF23169 - 2.8 7.2 6.2 3.5 6.9 6.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CoaE PF01121.20 ORF20796 - 4.7e-17 62.2 0.1 6e-17 61.9 0.1 1.1 1 0 0 1 1 1 1 Dephospho-CoA kinase GST_C PF00043.25 ORF20023 - 1e-08 35.3 0.0 1.9e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF20023 - 5.2e-07 29.6 0.0 8.5e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF20023 - 5.5e-06 26.5 0.0 9.3e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF20023 - 0.19 11.5 0.0 1.3 8.8 0.0 2.0 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Pkinase PF00069.25 ORF20015 - 1.4e-05 24.7 0.0 1.8e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_C PF00433.24 ORF20015 - 0.049 14.3 0.7 0.089 13.5 0.7 1.4 1 0 0 1 1 1 0 Protein kinase C terminal domain GST_C_3 PF14497.6 ORF19942 - 0.00012 22.2 0.0 0.00019 21.5 0.0 1.3 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF19942 - 0.00013 21.9 0.0 0.00022 21.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF19942 - 0.00094 19.4 0.0 0.0015 18.7 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Rox3 PF08633.10 ORF19942 - 0.03 14.6 0.0 0.037 14.3 0.0 1.2 1 0 0 1 1 1 0 Rox3 mediator complex subunit PfkB PF00294.24 ORF19603 - 0.0023 17.3 0.0 0.0034 16.8 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase EB PF01683.18 ORF19126 - 0.023 15.0 15.3 0.26 11.6 4.3 3.1 3 0 0 3 3 3 0 EB module Epiglycanin_TR PF05647.11 ORF19126 - 0.041 13.8 1.1 0.06 13.3 1.1 1.2 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like Toxin_12 PF07740.12 ORF19126 - 0.063 14.0 0.7 0.063 14.0 0.7 3.5 3 1 0 3 3 3 0 Ion channel inhibitory toxin Dickkopf_N PF04706.12 ORF19126 - 0.099 13.1 1.1 0.099 13.1 1.1 3.1 2 1 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region Nodulin_late PF07127.11 ORF19126 - 4 7.9 12.8 3.7 8.0 0.2 3.3 3 1 0 3 3 3 0 Late nodulin protein WAP PF00095.21 ORF19126 - 4.5 7.7 15.6 7.2 7.1 0.4 3.3 3 1 0 3 3 3 0 WAP-type (Whey Acidic Protein) 'four-disulfide core' SM-ATX PF14438.6 ORF18998 - 0.001 19.2 0.1 0.0021 18.2 0.1 1.4 1 0 0 1 1 1 1 Ataxin 2 SM domain zf-C3HC4_3 PF13920.6 ORF17848 - 0.00071 19.4 9.4 0.0012 18.6 9.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) DUF1451 PF07295.11 ORF17848 - 0.0043 17.1 7.1 0.0047 17.0 5.7 1.7 2 0 0 2 2 2 1 Zinc-ribbon containing domain zf-RING_4 PF14570.6 ORF17848 - 0.13 12.1 12.0 0.26 11.1 12.0 1.5 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Ribosomal_L40e PF01020.17 ORF17848 - 0.16 11.9 4.3 0.35 10.8 4.3 1.6 1 0 0 1 1 1 0 Ribosomal L40e family Prok-RING_4 PF14447.6 ORF17848 - 0.22 11.4 8.3 0.8 9.6 8.3 1.9 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF17848 - 0.31 11.0 11.9 0.23 11.4 10.5 1.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) HypA PF01155.19 ORF17848 - 0.34 10.9 5.8 0.42 10.7 5.3 1.4 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C3HC4_2 PF13923.6 ORF17848 - 0.61 10.0 10.0 1.1 9.2 10.0 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Atypical_Card PF18461.1 ORF17386 - 0.031 14.5 0.1 0.043 14.0 0.1 1.3 1 0 0 1 1 1 0 Atypical caspase recruitment domain Peptidase_S8_N PF16361.5 ORF17386 - 0.08 13.4 0.1 0.14 12.6 0.1 1.4 1 0 0 1 1 1 0 N-terminal of Subtilase family DUF1917 PF08939.10 ORF1728 - 0.11 12.3 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1917) FHA PF00498.26 ORF15574 - 2.8e-09 37.2 0.8 5.7e-09 36.2 0.4 1.6 2 0 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 ORF15574 - 8.5e-07 29.2 0.0 1.6e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain RINGv PF12906.7 ORF15574 - 0.00053 20.1 0.4 0.0011 19.0 0.4 1.6 1 1 0 1 1 1 1 RING-variant domain zf-RRPl_C4 PF17026.5 ORF15574 - 0.0044 17.1 0.8 0.88 9.7 0.3 2.3 2 1 0 2 2 2 2 Putative ribonucleoprotein zinc-finger pf C4 type FHA_2 PF17913.1 ORF15574 - 0.049 13.9 0.1 0.086 13.1 0.1 1.4 1 0 0 1 1 1 0 FHA domain FANCL_C PF11793.8 ORF15574 - 0.053 13.7 1.0 0.12 12.5 1.0 1.7 1 1 0 1 1 1 0 FANCL C-terminal domain Ribosomal_L22e PF01776.17 ORF15508 - 8.4e-38 129.1 7.0 1.1e-37 128.7 7.0 1.2 1 0 0 1 1 1 1 Ribosomal L22e protein family Rad4 PF03835.15 ORF15508 - 0.0059 16.3 0.2 0.0069 16.1 0.2 1.1 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain DUF2281 PF10047.9 ORF15508 - 0.079 13.7 0.7 7.7 7.3 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2281) DUF3449 PF11931.8 ORF15418 - 0.036 13.9 0.1 0.052 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) HEPN_Cthe2314 PF18730.1 ORF15157 - 0.086 12.9 6.5 1.1 9.3 6.3 2.2 1 1 0 1 1 1 0 Cthe_2314-like HEPN Mito_carr PF00153.27 ORF12888 - 2.5e-31 107.5 0.1 1.6e-21 76.1 0.1 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein EELM2 PF15863.5 ORF12488 - 0.1 12.7 0.3 0.13 12.4 0.3 1.3 1 0 0 1 1 1 0 Extended EGL-27 and MTA1 homology domain SIT PF15330.6 ORF11967 - 0.0099 16.3 0.0 0.016 15.6 0.0 1.3 1 0 0 1 1 1 1 SHP2-interacting transmembrane adaptor protein, SIT PepSY_TM_like_2 PF16357.5 ORF11967 - 0.026 14.5 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 Putative PepSY_TM-like DUF4452 PF14618.6 ORF112060 - 0.035 14.0 0.0 0.05 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4452) AMP-binding PF00501.28 ORF111605 - 1.3e-14 53.6 0.0 1.3e-14 53.6 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme tRNA_SAD PF07973.14 ORF111112 - 5.3e-06 26.4 1.0 8.8e-06 25.7 1.0 1.3 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain FadR_C PF07840.12 ORF110448 - 0.14 12.0 2.9 0.71 9.8 0.4 2.0 1 1 0 2 2 2 0 FadR C-terminal domain MtrD PF04207.12 ORF107849 - 0.0022 17.7 1.1 0.0027 17.4 1.1 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D ERGIC_N PF13850.6 ORF107849 - 0.062 13.6 0.3 0.12 12.8 0.3 1.5 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4476 PF14771.6 ORF107849 - 0.1 12.9 0.1 0.18 12.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4476) KilA-N PF04383.13 ORF106755 - 0.088 12.7 1.4 0.089 12.6 0.4 1.6 2 0 0 2 2 2 0 KilA-N domain Cylicin_N PF15241.6 ORF106755 - 0.16 12.1 2.8 0.6 10.3 0.8 2.1 2 0 0 2 2 2 0 Cylicin N-terminus Ribosomal_S9 PF00380.19 ORF106231 - 1.1e-28 100.1 0.4 1.3e-28 99.9 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Flavokinase PF01687.17 ORF105514 - 9.5e-17 61.3 0.0 1.1e-16 61.1 0.0 1.1 1 0 0 1 1 1 1 Riboflavin kinase Med11 PF10280.9 ORF10509 - 0.031 14.7 0.2 0.073 13.5 0.3 1.5 2 0 0 2 2 2 0 Mediator complex protein AKAP95 PF04988.12 ORF103783 - 0.056 13.7 0.3 0.083 13.1 0.3 1.2 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) DUF5451 PF17532.2 ORF103783 - 0.089 13.1 0.8 0.11 12.7 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5451) Herpes_U47 PF05467.11 ORF103337 - 0.72 7.9 2.0 1.1 7.3 2.0 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 PhoLip_ATPase_C PF16212.5 ORF1026 - 7.4e-32 111.1 15.5 8.4e-32 110.9 15.5 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Hum_adeno_E3A PF05393.11 ORF1026 - 2.9 7.9 5.5 0.58 10.2 0.7 2.0 2 1 0 2 2 2 0 Human adenovirus early E3A glycoprotein Herpes_U47 PF05467.11 ORF102309 - 0.72 7.9 2.0 1.1 7.3 2.0 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 MYO10_CC PF16735.5 ORF102269 - 0.12 12.5 0.2 5.1 7.3 0.1 2.2 2 0 0 2 2 2 0 Unconventional myosin-X coiled coil domain ROK PF00480.20 ORF101602 - 7.6e-32 111.0 0.0 8.4e-32 110.8 0.0 1.0 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 ORF101602 - 0.0038 16.3 0.0 0.0047 16.0 0.0 1.2 1 0 0 1 1 1 1 Glucokinase Herpes_U47 PF05467.11 ORF101241 - 0.72 7.9 2.0 1.1 7.3 2.0 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 Rhodanese PF00581.20 ORF100969 - 7.5e-17 61.8 0.0 9.3e-17 61.5 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain Baculo_Y142 PF04913.12 ORF100969 - 0.043 12.5 0.0 0.047 12.4 0.0 1.1 1 0 0 1 1 1 0 Baculovirus Y142 protein MNHE PF01899.16 ORF100969 - 0.058 13.1 0.0 0.077 12.8 0.0 1.1 1 0 0 1 1 1 0 Na+/H+ ion antiporter subunit NAD_binding_1 PF00175.21 ORF100299 - 8.8e-24 84.3 0.0 1.1e-23 83.9 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain YmgD PF16456.5 ORF100299 - 0.053 13.6 0.0 0.079 13.0 0.0 1.3 1 0 0 1 1 1 0 YmgD protein DUF4215 PF13948.6 NODE_45969_length_424_cov_1.768638_g38169_i0reverse_frame_1 - 0.0016 18.8 38.5 0.13 12.7 5.6 4.3 3 2 1 4 4 4 4 Domain of unknown function (DUF4215) Rpr2 PF04032.16 NODE_45964_length_424_cov_2.254499_g38165_i0reverse_frame_1 - 0.045 14.0 0.2 0.059 13.7 0.2 1.3 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Nfu_N PF08712.11 NODE_45944_length_424_cov_45.609254_g38145_i0reverse_frame_1 - 0.011 15.8 0.6 0.033 14.2 0.4 1.8 1 1 1 2 2 2 0 Scaffold protein Nfu/NifU N terminal Cadherin_tail PF15974.5 NODE_45929_length_424_cov_125.424165_g38130_i0reverse_frame_1 - 2.4 8.5 7.1 3.5 7.9 7.1 1.3 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region CHCH PF06747.13 NODE_45916_length_424_cov_617.218509_g38118_i0reverse_frame_1 - 0.02 15.0 1.2 1.5 9.0 0.1 2.4 1 1 2 3 3 3 0 CHCH domain Pet191_N PF10203.9 NODE_45916_length_424_cov_617.218509_g38118_i0reverse_frame_1 - 0.034 14.4 1.0 0.78 10.1 0.0 2.3 1 1 1 2 2 2 0 Cytochrome c oxidase assembly protein PET191 DUF1981 PF09324.10 NODE_45916_length_424_cov_617.218509_g38118_i0reverse_frame_1 - 0.049 13.5 0.3 0.13 12.2 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1981) IL3 PF02059.15 NODE_45916_length_424_cov_617.218509_g38118_i0reverse_frame_1 - 0.051 13.6 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 Interleukin-3 SVA PF05326.11 NODE_45896_length_425_cov_2.617949_g38100_i0reverse_frame_1 - 0.068 13.2 0.7 0.068 13.2 0.7 1.7 2 0 0 2 2 2 0 Seminal vesicle autoantigen (SVA) Polysacc_synt_3 PF13440.6 NODE_45885_length_425_cov_3.517949_g38089_i0reverse_frame_1 - 0.016 14.4 0.6 0.021 14.0 0.6 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF1449 PF07290.11 NODE_45885_length_425_cov_3.517949_g38089_i0forward_frame_1 - 0.0012 18.5 0.1 0.0016 18.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1449) Sex_peptide PF08138.11 NODE_45871_length_425_cov_67.907692_g38075_i0reverse_frame_1 - 0.12 12.5 5.4 0.21 11.7 5.4 1.4 1 0 0 1 1 1 0 Sex peptide (SP) family Cytochrome-c551 PF10643.9 NODE_45868_length_425_cov_70.410256_g38072_i0reverse_frame_1 - 1.5 8.4 4.8 0.89 9.1 2.5 1.7 1 1 0 2 2 2 0 Photosystem P840 reaction-centre cytochrome c-551 DPM3 PF08285.11 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_1 - 0.061 13.5 1.0 0.099 12.9 0.2 1.8 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) LST1 PF05083.13 NODE_45863_length_425_cov_79.525641_g38067_i0reverse_frame_1 - 1.9 8.8 0.0 1.9 8.8 0.0 2.6 2 1 1 3 3 3 0 LST-1 protein PilJ PF13675.6 NODE_45851_length_425_cov_153.358974_g38055_i0reverse_frame_1 - 0.11 12.6 4.1 1.2 9.2 0.3 2.8 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term Fer4_5 PF12801.7 NODE_45847_length_425_cov_203.407692_g36474_i2reverse_frame_1 - 0.016 15.2 1.5 0.04 13.9 1.5 1.6 1 1 0 1 1 1 0 4Fe-4S binding domain DUF5408 PF17402.2 NODE_45846_length_425_cov_215.561538_g38051_i0reverse_frame_1 - 0.29 11.1 6.0 10 6.1 0.2 3.1 3 0 0 3 3 3 0 Family of unknown function (DUF5408) RCC1_2 PF13540.6 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_1 - 1.6e-06 27.7 7.4 0.074 12.9 0.2 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Peptidase_C36 PF05415.11 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_1 - 0.038 14.2 0.0 0.17 12.1 0.0 2.0 1 1 1 2 2 2 0 Beet necrotic yellow vein furovirus-type papain-like endopeptidase Spectrin PF00435.21 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_1 - 0.046 14.2 0.0 69 4.0 0.0 2.9 3 0 0 3 3 3 0 Spectrin repeat DUF4984 PF16372.5 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_1 - 0.06 13.3 0.2 39 4.1 0.0 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4984) Glyco_hydro_38N PF01074.22 NODE_45838_length_425_cov_914.235897_g38043_i0forward_frame_1 - 5.1e-14 52.3 0.2 6.5e-14 52.0 0.2 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 NODE_45838_length_425_cov_914.235897_g38043_i0forward_frame_1 - 1.7e-09 37.7 0.0 3.2e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 Alpha mannosidase middle domain 2Fe-2S_Ferredox PF11591.8 NODE_45819_length_426_cov_14.608696_g38025_i0forward_frame_1 - 0.12 12.2 0.6 1.8 8.5 0.1 2.4 2 0 0 2 2 2 0 Ferredoxin chloroplastic transit peptide Cytomega_UL84 PF06284.11 NODE_45816_length_426_cov_26.173913_g38022_i0forward_frame_1 - 0.037 12.5 0.1 0.046 12.2 0.1 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein zf-Tim10_DDP PF02953.15 NODE_45773_length_426_cov_264.051151_g37980_i0forward_frame_1 - 0.00028 20.4 4.3 0.00028 20.4 4.3 1.9 1 1 1 2 2 2 1 Tim10/DDP family zinc finger WTF PF03303.13 NODE_45772_length_426_cov_277.038363_g37979_i0reverse_frame_1 - 0.69 9.6 5.7 0.96 9.1 5.7 1.2 1 1 0 1 1 1 0 WTF protein Novirhabdo_Nv PF05554.11 NODE_45771_length_426_cov_316.424552_g37978_i0reverse_frame_1 - 0.087 12.6 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 Viral hemorrhagic septicemia virus non-virion protein Internalin_N PF12354.8 NODE_45767_length_426_cov_842.846547_g37974_i0forward_frame_1 - 0.099 12.7 1.0 0.39 10.8 0.0 2.1 2 0 0 2 2 2 0 Bacterial adhesion/invasion protein N terminal DUF412 PF04217.13 NODE_45758_length_427_cov_1.706633_g37968_i0forward_frame_3 - 0.16 11.9 2.7 0.27 11.1 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF412 MatE PF01554.18 NODE_45751_length_427_cov_2.737245_g37961_i0forward_frame_2 - 1.3e-21 76.9 2.7 1.5e-21 76.7 2.7 1.1 1 0 0 1 1 1 1 MatE DUF1391 PF07151.12 NODE_45751_length_427_cov_2.737245_g37961_i0forward_frame_2 - 0.2 11.5 0.0 0.38 10.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1391) Mso1_C PF14477.6 NODE_45738_length_427_cov_5.206633_g37948_i0forward_frame_2 - 0.092 13.2 0.1 0.092 13.2 0.1 2.3 2 1 0 2 2 2 0 Membrane-polarising domain of Mso1 Ephrin_rec_like PF07699.13 NODE_45737_length_427_cov_10.645408_g37947_i0forward_frame_3 - 0.026 14.3 1.0 0.026 14.3 1.0 5.2 3 2 2 5 5 5 0 Putative ephrin-receptor like Cmc1 PF08583.10 NODE_45737_length_427_cov_10.645408_g37947_i0forward_frame_3 - 0.19 11.8 4.3 0.41 10.7 4.3 1.5 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like LRR_4 PF12799.7 NODE_45736_length_427_cov_15.007653_g37946_i0reverse_frame_3 - 1.4e-10 41.2 9.2 0.0093 16.4 0.2 4.0 2 1 3 5 5 5 5 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_45736_length_427_cov_15.007653_g37946_i0reverse_frame_3 - 0.0065 16.2 15.8 0.026 14.3 2.8 3.9 2 1 2 4 4 4 3 Leucine rich repeat PhyH PF05721.13 NODE_45731_length_427_cov_56.869898_g37941_i0reverse_frame_3 - 0.095 12.9 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) DUF1415 PF07209.12 NODE_45729_length_427_cov_63.479592_g37939_i0reverse_frame_2 - 0.0015 18.3 0.0 0.0022 17.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1415) SBP PF03110.14 NODE_45729_length_427_cov_63.479592_g37939_i0reverse_frame_2 - 0.045 14.1 0.8 0.07 13.4 0.8 1.3 1 0 0 1 1 1 0 SBP domain DUF5582 PF17819.1 NODE_45726_length_427_cov_78.994898_g37936_i0reverse_frame_2 - 2.8e-05 24.6 0.0 4.1e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5582) Dpy-30 PF05186.13 NODE_45726_length_427_cov_78.994898_g37936_i0reverse_frame_2 - 0.0019 17.8 0.0 0.0038 16.9 0.0 1.5 1 0 0 1 1 1 1 Dpy-30 motif 7tm_3 PF00003.22 NODE_45714_length_427_cov_128.780612_g37925_i0reverse_frame_3 - 0.025 14.3 1.1 0.034 13.9 1.1 1.1 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR DHHC PF01529.20 NODE_45714_length_427_cov_128.780612_g37925_i0reverse_frame_3 - 0.56 10.3 3.6 0.88 9.7 3.5 1.4 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF3139 PF11337.8 NODE_45714_length_427_cov_128.780612_g37925_i0reverse_frame_3 - 4.5 8.0 10.3 1.2 9.8 6.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) ENT PF03735.14 NODE_45709_length_427_cov_174.987245_g37599_i1forward_frame_3 - 0.047 13.8 0.5 0.083 13.0 0.5 1.4 1 0 0 1 1 1 0 ENT domain SAPIS-gp6 PF16722.5 NODE_45693_length_428_cov_1.740458_g37909_i0reverse_frame_2 - 0.24 11.8 1.9 0.46 10.9 1.9 1.5 1 0 0 1 1 1 0 Pathogenicity island protein gp6 in Staphylococcus DUF5559 PF17714.1 NODE_45693_length_428_cov_1.740458_g37909_i0forward_frame_2 - 0.1 12.5 0.1 0.15 11.9 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5559) Myelin_PLP PF01275.19 NODE_45691_length_428_cov_2.066158_g37907_i0reverse_frame_3 - 0.05 13.5 0.2 0.061 13.2 0.2 1.2 1 0 0 1 1 1 0 Myelin proteolipid protein (PLP or lipophilin) RsgA_GTPase PF03193.16 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 8.4e-07 29.0 0.8 0.0059 16.5 0.0 2.0 1 1 1 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.00027 20.5 1.4 0.12 11.9 0.1 2.4 2 1 0 2 2 2 2 Ferrous iron transport protein B MMR_HSR1 PF01926.23 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.0032 17.5 4.0 0.0041 17.2 0.5 2.5 3 1 0 3 3 3 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.005 16.4 0.4 0.023 14.3 0.0 1.9 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain MyTH4 PF00784.17 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.071 13.6 0.1 0.13 12.8 0.1 1.4 1 0 0 1 1 1 0 MyTH4 domain MeaB PF03308.16 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.12 11.4 0.3 0.62 9.0 0.1 1.9 1 1 1 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks158.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks158.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks158.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks158.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LYTB PF02401.18 NODE_45689_length_428_cov_2.198473_g37905_i0reverse_frame_3 - 0.062 12.5 0.0 0.072 12.3 0.0 1.2 1 0 0 1 1 1 0 LytB protein Lipase_3 PF01764.25 NODE_45689_length_428_cov_2.198473_g37905_i0reverse_frame_2 - 4e-12 46.2 0.0 5.1e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) DUF676 PF05057.14 NODE_45689_length_428_cov_2.198473_g37905_i0reverse_frame_2 - 0.03 13.8 0.0 0.04 13.4 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_45689_length_428_cov_2.198473_g37905_i0reverse_frame_2 - 0.14 11.9 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein Kinesin PF00225.23 NODE_45688_length_428_cov_2.208651_g37904_i0reverse_frame_2 - 5e-13 48.7 11.1 1.6e-06 27.3 5.2 2.8 1 1 1 2 2 2 2 Kinesin motor domain Kelch_5 PF13854.6 NODE_45688_length_428_cov_2.208651_g37904_i0reverse_frame_2 - 0.21 11.6 1.7 0.38 10.8 1.7 1.4 1 0 0 1 1 1 0 Kelch motif Rad21_Rec8_N PF04825.13 NODE_45687_length_428_cov_2.211196_g37903_i0forward_frame_3 - 0.00034 20.8 0.3 0.00052 20.2 0.1 1.4 1 1 0 1 1 1 1 N terminus of Rad21 / Rec8 like protein PRESAN PF09687.10 NODE_45687_length_428_cov_2.211196_g37903_i0forward_frame_3 - 0.0097 16.5 0.9 0.022 15.3 0.2 1.8 1 1 1 2 2 2 1 Plasmodium RESA N-terminal PRTP PF01366.18 NODE_45685_length_428_cov_2.361323_g37901_i0forward_frame_2 - 0.068 11.2 0.2 0.068 11.2 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus processing and transport protein Biopterin_H PF00351.21 NODE_45684_length_428_cov_2.366412_g37900_i0reverse_frame_2 - 0.03 13.4 1.2 0.038 13.0 1.2 1.1 1 0 0 1 1 1 0 Biopterin-dependent aromatic amino acid hydroxylase Presenilin PF01080.17 NODE_45672_length_428_cov_47.050891_g37888_i0reverse_frame_3 - 3.9 6.1 5.8 3.6 6.2 5.8 1.2 1 0 0 1 1 1 0 Presenilin DUF2973 PF11189.8 NODE_45670_length_428_cov_54.216285_g37886_i0reverse_frame_3 - 0.019 15.0 0.4 0.024 14.7 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) Zfx_Zfy_act PF04704.13 NODE_45670_length_428_cov_54.216285_g37886_i0forward_frame_2 - 0.54 9.3 4.7 0.61 9.1 4.7 1.1 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region YafO_toxin PF13957.6 NODE_45668_length_428_cov_59.837150_g37884_i0forward_frame_2 - 0.051 13.6 0.0 0.073 13.1 0.0 1.3 1 0 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system ArAE_1_C PF11728.8 NODE_45662_length_428_cov_75.282443_g37878_i0reverse_frame_3 - 0.0039 17.2 1.6 0.006 16.6 1.6 1.3 1 0 0 1 1 1 1 Putative aromatic acid exporter C-terminal domain MCR_gamma PF02240.16 NODE_45661_length_428_cov_75.519084_g37877_i0reverse_frame_3 - 0.045 13.0 0.1 0.056 12.7 0.1 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase gamma subunit Man-6-P_recep PF02157.15 NODE_45661_length_428_cov_75.519084_g37877_i0reverse_frame_2 - 0.0054 15.9 0.1 0.0068 15.5 0.1 1.2 1 0 0 1 1 1 1 Mannose-6-phosphate receptor MMM1 PF10296.9 NODE_45661_length_428_cov_75.519084_g37877_i0reverse_frame_2 - 0.032 13.3 0.3 0.046 12.8 0.3 1.3 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 PhoD PF09423.10 NODE_45656_length_428_cov_92.284987_g37872_i0forward_frame_2 - 0.038 13.0 0.1 0.054 12.5 0.1 1.3 1 0 0 1 1 1 0 PhoD-like phosphatase RCC1 PF00415.18 NODE_45655_length_428_cov_94.595420_g37871_i0forward_frame_3 - 5.9e-10 39.6 2.8 7.8e-06 26.4 0.0 3.5 3 1 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_45655_length_428_cov_94.595420_g37871_i0forward_frame_3 - 1.4e-06 27.9 2.5 0.00043 20.0 0.1 2.5 2 1 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Joubert PF15392.6 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_3 - 0.012 15.3 5.6 0.014 15.1 5.6 1.0 1 0 0 1 1 1 0 Joubert syndrome-associated Ribosomal_S27 PF01599.19 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_2 - 2.7e-26 91.4 3.1 2.7e-26 91.4 3.1 1.8 2 0 0 2 2 2 1 Ribosomal protein S27a ubiquitin PF00240.23 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_2 - 5.6e-08 32.4 0.0 1.9e-07 30.7 0.0 1.8 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_2 - 0.045 13.6 0.0 0.2 11.5 0.0 2.0 2 1 1 3 3 3 0 Ubiquitin-2 like Rad60 SUMO-like 2OG-FeII_Oxy_3 PF13640.6 NODE_45641_length_428_cov_201.623410_g37857_i0forward_frame_3 - 0.0004 21.2 0.0 0.00061 20.6 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily TMEM101 PF15111.6 NODE_45639_length_428_cov_234.837150_g37855_i0reverse_frame_2 - 0.027 14.0 0.4 0.048 13.2 0.2 1.5 1 1 1 2 2 2 0 TMEM101 protein family DUF167 PF02594.16 NODE_45634_length_428_cov_816.618321_g37850_i0reverse_frame_2 - 2.9e-09 36.9 0.2 4.6e-09 36.3 0.2 1.3 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Shisa PF13908.6 NODE_45633_length_428_cov_2171.206107_g37849_i0reverse_frame_3 - 0.0053 17.0 0.5 0.006 16.9 0.5 1.2 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF2555 PF10742.9 NODE_45633_length_428_cov_2171.206107_g37849_i0reverse_frame_2 - 6.8e-05 22.6 3.7 0.079 12.8 0.1 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF2555) LysM PF01476.20 NODE_45631_length_428_cov_2378.473282_g37847_i0forward_frame_3 - 0.11 12.6 0.0 0.44 10.7 0.0 1.9 2 0 0 2 2 2 0 LysM domain PAC4 PF16093.5 NODE_45629_length_428_cov_2560.603053_g37845_i1reverse_frame_3 - 8.8e-08 32.2 0.0 1.2e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 PAC4 PF16093.5 NODE_45628_length_428_cov_2560.653944_g37845_i0reverse_frame_2 - 8.7e-08 32.3 0.0 1.2e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 DUF2671 PF10877.8 NODE_45627_length_428_cov_2782.000000_g36700_i2forward_frame_3 - 0.024 14.4 0.6 0.054 13.3 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) PDR_CDR PF06422.12 NODE_45627_length_428_cov_2782.000000_g36700_i2forward_frame_3 - 8.3 6.4 8.1 45 4.0 8.1 1.9 1 1 0 1 1 1 0 CDR ABC transporter ABC_export PF16962.5 NODE_45627_length_428_cov_2782.000000_g36700_i2forward_frame_2 - 0.014 13.8 2.9 0.018 13.5 2.9 1.1 1 0 0 1 1 1 0 Putative ABC exporter TSP_NTD PF17804.1 NODE_45623_length_429_cov_1.685279_g37841_i0forward_frame_3 - 0.072 13.4 0.2 0.3 11.3 0.0 1.9 2 0 0 2 2 2 0 Tail specific protease N-terminal domain Mei5_like PF17021.5 NODE_45623_length_429_cov_1.685279_g37841_i0forward_frame_3 - 0.095 12.7 1.4 5.8 7.0 0.1 2.3 2 0 0 2 2 2 0 Putative double-strand recombination repair-like TBCA PF02970.16 NODE_45623_length_429_cov_1.685279_g37841_i0forward_frame_3 - 0.1 13.0 1.2 0.5 10.7 0.2 2.0 2 0 0 2 2 2 0 Tubulin binding cofactor A CH_2 PF06294.11 NODE_45616_length_429_cov_2.010152_g37834_i0reverse_frame_2 - 0.017 15.3 0.2 0.021 14.9 0.2 1.2 1 0 0 1 1 1 0 CH-like domain in sperm protein Ribonucleas_3_2 PF11469.8 NODE_45616_length_429_cov_2.010152_g37834_i0reverse_frame_2 - 0.12 12.8 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 Ribonuclease III DUF705 PF05152.12 NODE_45613_length_429_cov_2.274112_g37831_i0reverse_frame_2 - 0.041 13.3 1.4 0.066 12.7 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF705) ApeA_NTD1 PF18862.1 NODE_45605_length_429_cov_3.055838_g37823_i0reverse_frame_3 - 0.072 12.6 0.1 0.082 12.5 0.1 1.2 1 0 0 1 1 1 0 ApeA N-terminal domain 1 FAM117 PF15388.6 NODE_45605_length_429_cov_3.055838_g37823_i0reverse_frame_2 - 0.0038 16.7 0.8 0.0049 16.4 0.8 1.2 1 0 0 1 1 1 1 Protein Family FAM117 DUF454 PF04304.13 NODE_45604_length_429_cov_3.154822_g37822_i0forward_frame_2 - 0.075 13.1 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF454) PPR_2 PF13041.6 NODE_45602_length_429_cov_3.527919_g37820_i0reverse_frame_2 - 2.4e-14 53.2 0.0 5.2e-08 33.0 0.0 3.0 2 1 1 3 3 3 3 PPR repeat family PPR PF01535.20 NODE_45602_length_429_cov_3.527919_g37820_i0reverse_frame_2 - 2.6e-11 42.9 0.1 6.8e-05 22.9 0.0 3.2 3 0 0 3 3 3 2 PPR repeat PPR_3 PF13812.6 NODE_45602_length_429_cov_3.527919_g37820_i0reverse_frame_2 - 1.9e-10 40.6 0.0 1.1e-05 25.4 0.0 2.5 2 1 0 2 2 2 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_45602_length_429_cov_3.527919_g37820_i0reverse_frame_2 - 7e-09 35.2 0.0 0.00054 19.6 0.0 3.7 4 0 0 4 4 4 2 PPR repeat Bundlin PF05307.11 NODE_45595_length_429_cov_42.494924_g37813_i0forward_frame_2 - 0.17 11.8 0.1 0.29 11.0 0.1 1.4 1 0 0 1 1 1 0 Bundlin GET2 PF08690.10 NODE_45590_length_429_cov_53.680203_g37808_i0forward_frame_2 - 0.026 14.2 2.8 0.031 14.0 2.8 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 Haem_oxygenas_2 PF14518.6 NODE_45589_length_429_cov_58.043147_g37807_i0reverse_frame_2 - 0.028 14.2 0.0 0.04 13.7 0.0 1.2 1 0 0 1 1 1 0 Iron-containing redox enzyme SAM_PNT PF02198.16 NODE_45589_length_429_cov_58.043147_g37807_i0forward_frame_3 - 0.071 13.1 0.0 0.15 12.1 0.0 1.6 1 1 0 1 1 1 0 Sterile alpha motif (SAM)/Pointed domain YMF19 PF02326.15 NODE_45581_length_429_cov_80.553299_g37799_i0reverse_frame_3 - 0.077 13.8 1.8 0.12 13.2 1.8 1.4 1 0 0 1 1 1 0 Plant ATP synthase F0 Comm PF15957.5 NODE_45581_length_429_cov_80.553299_g37799_i0reverse_frame_3 - 0.12 12.7 0.2 0.16 12.3 0.2 1.2 1 0 0 1 1 1 0 Commissureless VATC PF18716.1 NODE_45580_length_429_cov_81.058376_g37798_i0reverse_frame_3 - 1.3e-08 34.5 1.4 2.1e-08 33.9 1.4 1.3 1 0 0 1 1 1 1 Vms1-associating treble clef domain zf-FCS PF06467.14 NODE_45580_length_429_cov_81.058376_g37798_i0reverse_frame_3 - 0.24 11.4 3.5 0.59 10.1 3.5 1.7 1 1 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif RCC1_2 PF13540.6 NODE_45575_length_429_cov_109.370558_g37793_i0reverse_frame_2 - 0.001 18.8 2.8 0.06 13.2 0.2 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Sp38 PF07354.12 NODE_45573_length_429_cov_135.738579_g37791_i0forward_frame_2 - 0.16 11.4 0.3 0.16 11.4 0.3 1.4 2 0 0 2 2 2 0 Zona-pellucida-binding protein (Sp38) DUF5414 PF17435.2 NODE_45572_length_429_cov_153.908629_g37790_i0reverse_frame_3 - 0.0062 16.2 0.4 0.0074 16.0 0.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5414) Cation_ATPase_C PF00689.21 NODE_45572_length_429_cov_153.908629_g37790_i0forward_frame_3 - 0.6 9.8 8.2 0.87 9.3 8.2 1.4 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus Vpu PF00558.19 NODE_45568_length_429_cov_216.266497_g37786_i0reverse_frame_2 - 0.05 13.4 0.1 0.081 12.7 0.1 1.3 1 0 0 1 1 1 0 Vpu protein ABC_export PF16962.5 NODE_45560_length_429_cov_2774.949239_g36700_i1forward_frame_3 - 0.014 13.8 2.9 0.018 13.5 2.9 1.1 1 0 0 1 1 1 0 Putative ABC exporter BofA PF07441.11 NODE_45560_length_429_cov_2774.949239_g36700_i1forward_frame_2 - 3.5 7.9 12.1 0.5 10.6 2.4 2.2 2 0 0 2 2 2 0 SigmaK-factor processing regulatory protein BofA zf-RING_2 PF13639.6 ORF99082 - 6.3e-10 39.2 14.9 6.3e-10 39.2 14.9 2.2 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF99082 - 1.2e-05 25.0 12.1 1.2e-05 25.0 12.1 3.0 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF99082 - 4.2e-05 23.3 12.5 4.2e-05 23.3 12.5 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF99082 - 0.0022 17.8 14.6 0.0022 17.8 14.6 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF99082 - 0.0024 18.1 11.4 0.0024 18.1 11.4 2.0 2 1 0 2 2 2 1 RING-H2 zinc finger domain DUF4548 PF15081.6 ORF99082 - 0.014 15.2 2.8 0.017 15.0 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4548) zf-RING_UBOX PF13445.6 ORF99082 - 0.05 13.6 6.8 0.05 13.6 6.8 2.8 3 0 0 3 3 3 0 RING-type zinc-finger SPATA19 PF15212.6 ORF97067 - 0.02 15.1 1.0 0.035 14.3 0.2 1.8 1 1 1 2 2 2 0 Spermatogenesis-associated protein 19, mitochondrial DUF5496 PF17600.2 ORF97067 - 0.064 13.3 0.1 0.1 12.6 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5496) DUF3496 PF12001.8 ORF97067 - 0.088 13.2 8.8 0.14 12.5 8.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) Cdh1_DBD_1 PF18196.1 ORF97067 - 0.14 12.5 7.1 0.14 12.5 6.1 1.5 1 1 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 DUF1087 PF06465.13 ORF96830 - 0.019 15.0 0.0 0.028 14.4 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) Terminase_6C PF17289.2 ORF96830 - 0.19 11.8 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 Terminase RNaseH-like domain Ribosomal_L13 PF00572.18 ORF96586 - 1.4e-57 193.3 0.4 1.6e-57 193.2 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L13 DUF4658 PF15555.6 ORF96490 - 0.16 12.0 1.5 0.3 11.2 1.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) hSH3 PF14603.6 ORF95352 - 0.0067 16.8 0.4 0.0067 16.8 0.4 1.6 2 0 0 2 2 2 1 Helically-extended SH3 domain N6_Mtase PF02384.16 ORF95352 - 0.027 13.8 3.3 0.02 14.2 2.0 1.5 1 1 0 1 1 1 0 N-6 DNA Methylase ATP-synt_E PF05680.12 ORF95147 - 0.95 9.8 7.6 1.6 9.1 7.6 1.6 1 1 0 1 1 1 0 ATP synthase E chain Ribosomal_L5_C PF00673.21 ORF94621 - 2.4e-41 139.8 0.0 3.1e-41 139.4 0.0 1.1 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF94621 - 9.1e-19 67.6 0.2 1.7e-18 66.7 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 DUF2862 PF11061.8 ORF94621 - 0.09 12.6 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2862) MspA PF09203.11 ORF94621 - 0.14 12.0 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 MspA DUF2859 PF11072.8 ORF94585 - 0.0048 16.6 0.0 0.0071 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2859) LysE PF01810.18 ORF9403 - 2.1e-06 27.4 11.4 2.3e-06 27.2 11.4 1.1 1 0 0 1 1 1 1 LysE type translocator Osmo_MPGsynth PF09488.10 ORF91818 - 0.18 10.5 0.1 0.22 10.2 0.1 1.0 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) Mpp10 PF04006.12 ORF91768 - 0.69 8.3 31.0 0.84 8.0 31.0 1.0 1 0 0 1 1 1 0 Mpp10 protein Trypan_PARP PF05887.11 ORF91768 - 1.7 8.6 7.1 2.3 8.2 7.1 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Nop14 PF04147.12 ORF91768 - 3.4 5.8 24.7 4.1 5.5 24.7 1.0 1 0 0 1 1 1 0 Nop14-like family TMEM119 PF15724.5 ORF91768 - 8.8 6.3 9.4 11 6.0 9.4 1.1 1 0 0 1 1 1 0 TMEM119 family SAPS PF04499.15 ORF91768 - 9.8 4.8 16.5 12 4.6 16.5 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein FAT PF02259.23 ORF9103 - 0.17 11.0 0.1 0.26 10.5 0.1 1.2 1 0 0 1 1 1 0 FAT domain FMO-like PF00743.19 ORF89290 - 0.00028 19.4 0.0 0.00044 18.8 0.0 1.3 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like PAP2 PF01569.21 ORF88958 - 0.014 15.2 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 0 PAP2 superfamily Ribosomal_L27e PF01777.18 ORF87614 - 1.3e-23 83.1 8.5 1.9e-23 82.6 8.5 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 ORF87614 - 0.019 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 KOW motif LPG_synthase_TM PF03706.13 ORF87332 - 0.0098 15.5 0.2 0.011 15.3 0.2 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region PAS_9 PF13426.7 ORF86724 - 0.039 14.2 0.2 0.057 13.7 0.2 1.3 1 0 0 1 1 1 0 PAS domain PSD5 PF07637.11 ORF86490 - 0.12 12.7 0.9 0.98 9.8 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1595) ADP_PFK_GK PF04587.15 ORF86477 - 7e-15 54.5 1.4 7.2e-15 54.5 1.4 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region DUF4507 PF14964.6 ORF86477 - 0.058 12.3 0.1 0.067 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4507) Catalase-rel PF06628.12 ORF86477 - 0.079 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Catalase-related immune-responsive FtsH_ext PF06480.15 ORF85826 - 0.19 12.1 1.3 0.31 11.4 1.3 1.5 1 1 0 1 1 1 0 FtsH Extracellular ECH_1 PF00378.20 ORF8378 - 5.6e-15 55.3 0.0 6.6e-15 55.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF8378 - 0.00013 21.5 0.0 0.012 15.1 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase ATP-synt_B PF00430.18 ORF83771 - 6.9e-11 42.4 19.3 1e-10 41.8 11.2 2.0 1 1 1 2 2 2 1 ATP synthase B/B' CF(0) V-ATPase_G PF03179.15 ORF83771 - 0.012 16.2 18.3 0.016 15.7 18.3 1.2 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit Neur_chan_memb PF02932.16 ORF83771 - 0.043 13.9 0.3 0.053 13.6 0.3 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3584 PF12128.8 ORF83771 - 0.059 10.9 12.5 0.069 10.7 12.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 ORF83771 - 0.26 11.1 18.4 0.73 9.7 10.8 2.1 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain Mt_ATP-synt_B PF05405.14 ORF83771 - 0.31 10.6 9.4 0.24 11.0 7.8 1.6 1 1 1 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Prominin PF05478.11 ORF83771 - 0.4 8.6 4.8 0.47 8.4 4.8 1.1 1 0 0 1 1 1 0 Prominin TP53IP5 PF15331.6 ORF83771 - 0.48 10.5 4.3 0.56 10.3 4.3 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 Presenilin PF01080.17 ORF83771 - 0.6 8.8 6.1 0.7 8.6 6.1 1.1 1 0 0 1 1 1 0 Presenilin OTU PF02338.19 ORF83771 - 0.86 10.1 3.8 1.3 9.6 0.5 2.0 1 1 1 2 2 2 0 OTU-like cysteine protease Hid1 PF12722.7 ORF83771 - 0.92 7.6 4.1 1.3 7.0 4.1 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein CDC73_N PF16050.5 ORF83771 - 0.99 8.7 10.6 1.2 8.4 10.6 1.1 1 0 0 1 1 1 0 Paf1 complex subunit CDC73 N-terminal DUF1682 PF07946.14 ORF83771 - 1.5 7.9 14.6 1.8 7.7 14.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Spore_III_AF PF09581.10 ORF83771 - 1.6 8.8 10.6 2.4 8.1 10.6 1.4 1 1 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Nup88 PF10168.9 ORF83771 - 2 6.1 9.0 2.5 5.8 9.0 1.0 1 0 0 1 1 1 0 Nuclear pore component DUF2228 PF10228.9 ORF83771 - 2.7 7.7 6.9 3.5 7.3 4.8 1.8 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2228) TMPIT PF07851.13 ORF83771 - 4 6.6 7.1 5.4 6.2 7.1 1.2 1 0 0 1 1 1 0 TMPIT-like protein FAM76 PF16046.5 ORF82152 - 0.00047 19.6 8.1 0.00047 19.6 8.1 1.4 1 1 0 1 1 1 1 FAM76 protein VIT1 PF01988.19 ORF82152 - 0.0051 16.7 0.8 0.0058 16.5 0.8 1.1 1 0 0 1 1 1 1 VIT family O-antigen_lig PF13425.6 ORF82152 - 0.075 11.8 7.8 0.087 11.6 7.8 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein HMMR_N PF15905.5 ORF82152 - 0.12 11.9 15.7 0.18 11.2 15.7 1.2 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF1854 PF08909.11 ORF82152 - 0.14 12.0 3.1 0.18 11.6 1.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF1854) Tubulin_C PF03953.17 ORF82152 - 0.16 12.1 2.5 0.28 11.4 0.4 2.0 1 1 1 2 2 2 0 Tubulin C-terminal domain Tho2 PF11262.8 ORF82152 - 0.17 11.0 7.8 0.2 10.8 7.8 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ParB PF08775.10 ORF82152 - 0.2 12.2 7.7 0.28 11.7 7.5 1.4 1 1 0 1 1 1 0 ParB family Adhesin_P1_N PF18652.1 ORF82152 - 0.27 11.3 5.3 0.57 10.2 0.3 2.5 1 1 1 2 2 2 0 Adhesin P1 N-terminal domain AAA_lid_7 PF17867.1 ORF81829 - 0.94 9.7 3.0 0.63 10.3 0.8 1.8 2 1 0 2 2 2 0 Midasin AAA lid domain Ricin_B_lectin PF00652.22 ORF81405 - 0.0011 19.3 2.7 0.0024 18.1 1.0 2.0 1 1 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RCC1_2 PF13540.6 ORF80462 - 5.5e-15 54.7 1.7 4.2e-06 26.4 0.0 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat MPTase-PolyVal PF18818.1 ORF7972 - 0.016 15.2 0.5 0.023 14.7 0.5 1.2 1 0 0 1 1 1 0 Metallopeptidase superfamily domain SF-assemblin PF06705.11 ORF7972 - 0.019 14.3 1.7 0.027 13.8 1.7 1.3 1 0 0 1 1 1 0 SF-assemblin/beta giardin T7SS_ESX_EspC PF10824.8 ORF7972 - 0.044 14.3 0.5 0.43 11.1 0.4 2.0 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm DUF2379 PF09543.10 ORF7972 - 0.062 13.5 5.3 0.053 13.7 3.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2379) Phage_Mu_Gam PF07352.12 ORF7972 - 0.078 12.9 3.1 1.1 9.2 0.3 2.1 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein Apolipoprotein PF01442.18 ORF7972 - 0.1 12.4 8.8 0.14 12.0 8.8 1.2 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF2203 PF09969.9 ORF7972 - 0.28 11.9 3.5 0.27 11.9 0.9 1.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) RasGAP_C PF03836.15 ORF7972 - 0.31 11.2 2.7 3.2 7.9 1.2 2.1 1 1 1 2 2 2 0 RasGAP C-terminus Exonuc_VII_L PF02601.15 ORF7972 - 0.39 10.3 3.9 0.43 10.1 3.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit CotJB PF12652.7 ORF79126 - 0.018 15.3 0.2 0.029 14.6 0.2 1.4 1 0 0 1 1 1 0 CotJB protein MMR_HSR1_Xtn PF16897.5 ORF78250 - 0.0076 16.2 0.3 0.012 15.7 0.2 1.6 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain IFT57 PF10498.9 ORF78250 - 0.012 14.7 8.1 0.013 14.5 8.1 1.2 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Phage_GP20 PF06810.11 ORF78250 - 0.068 13.0 0.4 0.068 13.0 0.4 2.1 1 1 0 2 2 2 0 Phage minor structural protein GP20 DUF2564 PF10819.8 ORF78250 - 0.077 13.4 2.3 2.6 8.5 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2564) Gluconate_2-dh3 PF13618.6 ORF78250 - 0.17 12.1 1.4 0.32 11.2 1.4 1.8 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 Tn7_Tnp_TnsA_C PF08721.11 ORF78250 - 0.3 11.8 2.9 1.5 9.6 0.2 2.3 2 1 0 2 2 2 0 TnsA endonuclease C terminal PGBA_C PF15437.6 ORF78250 - 5.6 7.4 11.7 1.5 9.2 3.8 2.4 2 1 0 2 2 2 0 Plasminogen-binding protein pgbA C-terminal DUF4472 PF14739.6 ORF76503 - 0.46 11.2 8.2 2.5 8.9 3.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) TMF_TATA_bd PF12325.8 ORF76503 - 0.65 10.2 12.1 6.2 7.1 6.6 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding ZapB PF06005.12 ORF76503 - 1.5 9.3 12.9 0.46 11.0 2.6 2.3 1 1 1 2 2 2 0 Cell division protein ZapB CENP-H PF05837.12 ORF76503 - 5.2 7.5 13.2 1.1 9.7 1.7 2.2 1 1 0 2 2 2 0 Centromere protein H (CENP-H) Peptidase_M14 PF00246.24 ORF75986 - 9.5e-13 48.6 0.0 1.2e-12 48.3 0.0 1.1 1 0 0 1 1 1 1 Zinc carboxypeptidase ABC_tran PF00005.27 ORF75588 - 9.2e-12 45.6 0.0 1.1e-11 45.5 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF75588 - 0.057 13.2 0.0 0.093 12.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 ORF75588 - 0.1 12.0 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Ribosomal_L27e PF01777.18 ORF74988 - 1.3e-23 83.1 8.5 1.9e-23 82.6 8.5 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 ORF74988 - 0.019 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 KOW motif Abhydrolase_1 PF00561.20 ORF70850 - 1.8e-05 24.5 0.1 1.9e-05 24.5 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold AAA_lid_7 PF17867.1 ORF7070 - 0.94 9.7 3.0 0.63 10.3 0.8 1.8 2 1 0 2 2 2 0 Midasin AAA lid domain NDUF_B6 PF09782.9 ORF68281 - 0.056 13.6 3.2 0.078 13.1 3.2 1.2 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit ExbD PF02472.16 ORF67961 - 2.2e-23 82.9 0.2 2.4e-23 82.7 0.2 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR KxDL PF10241.9 ORF67779 - 0.04 14.2 0.6 0.12 12.7 0.3 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein SPATA19 PF15212.6 ORF67687 - 0.02 15.1 1.0 0.035 14.3 0.2 1.8 1 1 1 2 2 2 0 Spermatogenesis-associated protein 19, mitochondrial DUF5496 PF17600.2 ORF67687 - 0.064 13.3 0.1 0.1 12.6 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5496) DUF3496 PF12001.8 ORF67687 - 0.088 13.2 8.8 0.14 12.5 8.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) Cdh1_DBD_1 PF18196.1 ORF67687 - 0.14 12.5 7.1 0.14 12.5 6.1 1.5 1 1 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 ECH_1 PF00378.20 ORF66996 - 5.6e-15 55.3 0.0 6.6e-15 55.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF66996 - 0.00013 21.5 0.0 0.012 15.1 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase ERGIC_N PF13850.6 ORF66914 - 0.026 14.9 0.1 0.033 14.5 0.1 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DRY_EERY PF09750.9 ORF65704 - 0.047 13.9 2.0 0.054 13.8 2.0 1.2 1 0 0 1 1 1 0 Alternative splicing regulator AAA_lid_7 PF17867.1 ORF65004 - 0.94 9.7 3.0 0.63 10.3 0.8 1.8 2 1 0 2 2 2 0 Midasin AAA lid domain POTRA PF07244.15 ORF64857 - 0.059 14.0 1.4 5.1 7.8 0.1 2.5 3 0 0 3 3 3 0 Surface antigen variable number repeat MFS_1 PF07690.16 ORF64193 - 8e-13 48.0 0.2 8.4e-13 48.0 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Abhydrolase_1 PF00561.20 ORF63892 - 2.7e-05 24.0 0.1 2.8e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF5563 PF17718.1 ORF63791 - 0.11 12.0 1.1 0.13 11.8 1.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5563) SR-25 PF10500.9 ORF63306 - 0.043 13.4 9.5 0.051 13.2 9.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 ORF63306 - 2.4 8.4 19.5 3.1 8.1 19.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Fmp27_SW PF10305.9 ORF60656 - 0.05 14.3 0.0 0.077 13.7 0.0 1.3 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Nic96 PF04097.14 ORF59216 - 0.14 10.6 0.0 0.14 10.6 0.0 1.0 1 0 0 1 1 1 0 Nup93/Nic96 Ribosomal_L11_N PF03946.14 ORF58830 - 3.1e-32 110.2 0.4 5.7e-32 109.4 0.4 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF58830 - 7.8e-26 90.4 2.3 1.2e-25 89.8 2.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain DUF3140 PF11338.8 ORF58830 - 0.04 14.3 0.2 0.13 12.7 0.1 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3140) AAA_lid_3 PF17862.1 ORF58830 - 0.099 12.5 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA+ lid domain Utp12 PF04003.12 ORF5876 - 0.024 15.0 0.2 0.034 14.4 0.2 1.3 1 0 0 1 1 1 0 Dip2/Utp12 Family DUF3306 PF11748.8 ORF5876 - 2 9.3 6.1 32 5.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3306) TamB PF04357.13 ORF58595 - 0.0069 15.7 1.7 0.0078 15.5 1.7 1.1 1 0 0 1 1 1 1 TamB, inner membrane protein subunit of TAM complex Flexi_CP_N PF08358.10 ORF58595 - 0.058 13.4 0.1 0.17 11.9 0.1 1.8 1 0 0 1 1 1 0 Carlavirus coat Phasin PF05597.11 ORF58595 - 0.084 12.9 0.4 0.15 12.1 0.3 1.5 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF4145 PF13643.6 ORF58038 - 1.9 8.7 5.5 0.4 10.8 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4145) CREPT PF16566.5 ORF57454 - 0.66 10.2 11.6 0.12 12.6 6.9 1.9 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Abhydrolase_1 PF00561.20 ORF56613 - 1.8e-05 24.5 0.1 1.9e-05 24.5 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold RTT107_BRCT_5 PF16770.5 ORF56607 - 0.059 13.3 0.1 0.15 12.0 0.1 1.8 1 1 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain HIT PF01230.23 ORF56294 - 6.2e-28 97.4 0.0 8.1e-28 97.0 0.0 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 ORF56294 - 1.9e-21 76.7 0.1 2.3e-21 76.4 0.1 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding COesterase PF00135.28 ORF56191 - 0.024 13.5 1.8 0.026 13.4 1.8 1.0 1 0 0 1 1 1 0 Carboxylesterase family Presenilin PF01080.17 ORF56191 - 1.6 7.4 5.2 2.1 7.0 5.2 1.2 1 0 0 1 1 1 0 Presenilin Fungal_lectin_2 PF18647.1 ORF54735 - 0.062 13.8 2.5 0.1 13.1 2.5 1.4 1 0 0 1 1 1 0 Alpha-galactosyl-binding fungal lectin DUF2457 PF10446.9 ORF54337 - 6.6 5.8 13.2 7.5 5.6 13.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) LRR_6 PF13516.6 ORF53667 - 7.8e-10 38.0 4.9 0.052 13.6 0.0 5.1 5 2 0 5 5 5 4 Leucine Rich repeat MTBP_C PF14920.6 ORF53329 - 0.36 10.5 4.1 0.38 10.5 4.1 1.2 1 0 0 1 1 1 0 MDM2-binding PAS_9 PF13426.7 ORF52759 - 0.039 14.2 0.2 0.057 13.7 0.2 1.3 1 0 0 1 1 1 0 PAS domain Tom5 PF10642.9 ORF50709 - 0.18 11.9 0.1 0.33 11.0 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial import receptor subunit or translocase HUN PF08729.10 ORF50335 - 0.013 15.5 1.2 0.027 14.5 1.2 1.5 1 0 0 1 1 1 0 HPC2 and ubinuclein domain DDE_Tnp_1_2 PF13586.6 ORF50335 - 0.059 13.8 0.0 0.084 13.2 0.0 1.2 1 0 0 1 1 1 0 Transposase DDE domain Cytochrom_B562 PF07361.11 ORF49984 - 2.8 8.6 12.2 0.22 12.2 5.2 2.0 1 1 1 2 2 2 0 Cytochrome b562 Pup PF05639.11 ORF49984 - 2.9 8.9 13.7 1.8 9.5 5.1 2.4 2 0 0 2 2 2 0 Pup-like protein Uds1 PF15456.6 ORF49984 - 4 7.6 12.5 40 4.4 12.5 2.0 1 1 0 1 1 1 0 Up-regulated During Septation DUF4801 PF16059.5 ORF49917 - 0.08 12.9 0.7 0.14 12.1 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) Tli4_C PF18426.1 ORF49663 - 0.12 12.6 0.3 0.16 12.3 0.3 1.1 1 0 0 1 1 1 0 Tle cognate immunity protein 4 C-terminal domain Atg14 PF10186.9 ORF49262 - 0.0028 16.8 3.4 0.0034 16.5 3.4 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Spore_YpjB PF09577.10 ORF49262 - 0.037 13.8 0.5 0.045 13.6 0.5 1.1 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) BicD PF09730.9 ORF49262 - 0.09 11.2 5.4 0.11 11.0 5.4 1.0 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D ADIP PF11559.8 ORF49262 - 0.18 11.9 5.8 0.28 11.3 5.8 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding Spc7 PF08317.11 ORF49262 - 0.27 10.1 6.6 0.34 9.7 6.6 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein HALZ PF02183.18 ORF49262 - 0.27 11.5 3.1 1.1 9.5 0.0 2.7 2 1 0 2 2 2 0 Homeobox associated leucine zipper APG6_N PF17675.1 ORF49262 - 0.43 11.1 7.0 0.99 9.9 6.9 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region HXXSHH PF07586.11 ORF49262 - 0.83 9.2 5.2 0.57 9.7 3.6 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1552) Peptidase_M14 PF00246.24 ORF49214 - 9.5e-13 48.6 0.0 1.2e-12 48.3 0.0 1.1 1 0 0 1 1 1 1 Zinc carboxypeptidase FtsH_ext PF06480.15 ORF48964 - 0.19 12.1 1.3 0.31 11.4 1.3 1.5 1 1 0 1 1 1 0 FtsH Extracellular Aa_trans PF01490.18 ORF48562 - 8.2e-10 37.9 3.4 9.2e-10 37.8 3.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein HemY_N PF07219.13 ORF48562 - 0.15 12.3 0.2 0.25 11.5 0.2 1.3 1 0 0 1 1 1 0 HemY protein N-terminus DUF2267 PF10025.9 ORF47320 - 0.029 14.7 0.0 0.068 13.5 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2267) FtsH_ext PF06480.15 ORF47174 - 0.19 12.1 1.3 0.31 11.4 1.3 1.5 1 1 0 1 1 1 0 FtsH Extracellular SHIPPO-rpt PF07004.12 ORF46397 - 6.2e-05 23.7 6.1 0.021 15.7 0.0 2.9 3 1 0 3 3 3 2 Sperm-tail PG-rich repeat Vps35 PF03635.17 ORF46158 - 0.00057 18.5 1.4 0.00061 18.4 1.4 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 adh_short PF00106.25 ORF46115 - 1e-12 48.0 0.1 1.1e-12 47.8 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF46115 - 2.2e-12 47.0 0.0 4.7e-12 46.0 0.0 1.5 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase Periviscerokin PF08259.11 ORF46115 - 4.3 7.9 6.3 0.34 11.3 1.5 1.8 2 0 0 2 2 2 0 Periviscerokinin family Usp PF00582.26 ORF45177 - 2.2e-16 60.6 0.0 2.5e-16 60.5 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Kazal_2 PF07648.15 ORF45177 - 0.013 15.6 0.1 0.021 14.9 0.1 1.3 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain Brix PF04427.18 ORF45177 - 0.055 13.6 0.0 0.069 13.2 0.0 1.1 1 0 0 1 1 1 0 Brix domain GTP-bdg_N PF13167.6 ORF45177 - 0.1 13.3 0.0 0.32 11.7 0.0 1.7 2 0 0 2 2 2 0 GTP-binding GTPase N-terminal DUF4895 PF16236.5 ORF45177 - 0.18 11.5 1.4 2.8 7.6 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4895) Ribosomal_L27e PF01777.18 ORF44616 - 1.3e-23 83.1 8.5 1.9e-23 82.6 8.5 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 ORF44616 - 0.019 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 KOW motif Uricase PF01014.18 ORF44384 - 0.13 12.6 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Uricase AIRS_C PF02769.22 ORF43697 - 9.8e-25 87.5 0.4 1.1e-24 87.3 0.4 1.1 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Abhydrolase_1 PF00561.20 ORF43219 - 1.8e-05 24.5 0.1 1.9e-05 24.5 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Nic96 PF04097.14 ORF40624 - 0.14 10.6 0.0 0.14 10.6 0.0 1.0 1 0 0 1 1 1 0 Nup93/Nic96 Uteroglobin PF01099.17 ORF40595 - 0.0072 16.6 0.3 0.014 15.7 0.1 1.5 2 0 0 2 2 2 1 Uteroglobin family TPR_12 PF13424.6 ORF39932 - 3.8e-12 46.3 0.0 1.5e-06 28.4 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF39932 - 1.1e-05 25.1 0.0 0.00057 19.7 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF39932 - 0.26 11.5 3.9 37 4.8 0.0 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF1178 PF06676.11 ORF39786 - 0.16 12.4 0.5 0.19 12.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) FapA PF03961.13 ORF39006 - 5.7 5.4 9.2 7.1 5.1 9.2 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A COG2 PF06148.11 ORF38692 - 6.2e-05 23.1 3.7 0.089 12.9 0.8 2.1 1 1 1 2 2 2 2 COG (conserved oligomeric Golgi) complex component, COG2 Spc7 PF08317.11 ORF38692 - 8e-05 21.7 12.0 9.9e-05 21.4 12.0 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein zf-C3HC4_4 PF15227.6 ORF38692 - 0.00012 22.2 3.3 0.00024 21.2 3.3 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Tropomyosin_1 PF12718.7 ORF38692 - 0.00052 20.2 3.7 0.00052 20.2 3.7 2.2 1 1 1 2 2 2 1 Tropomyosin like FlaC_arch PF05377.11 ORF38692 - 0.00062 20.1 12.2 0.0029 18.0 0.9 3.4 1 1 3 4 4 3 2 Flagella accessory protein C (FlaC) DHR10 PF18595.1 ORF38692 - 0.0007 19.6 0.3 0.0007 19.6 0.3 2.2 1 1 1 2 2 2 1 Designed helical repeat protein 10 domain CENP-F_leu_zip PF10473.9 ORF38692 - 0.0011 19.0 15.7 0.0023 18.0 15.7 1.6 1 1 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TACC_C PF05010.14 ORF38692 - 0.0014 18.4 13.6 0.016 15.0 4.0 2.0 1 1 1 2 2 2 2 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Laminin_I PF06008.14 ORF38692 - 0.0025 17.6 10.5 0.003 17.3 10.5 1.1 1 0 0 1 1 1 1 Laminin Domain I DUF4200 PF13863.6 ORF38692 - 0.0027 18.1 18.0 0.0036 17.7 18.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) DUF3584 PF12128.8 ORF38692 - 0.0029 15.2 7.5 0.0032 15.1 7.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) NPV_P10 PF05531.12 ORF38692 - 0.0029 18.0 5.6 0.099 13.1 2.3 2.3 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein Dynamin_M PF01031.20 ORF38692 - 0.0064 15.7 6.6 0.0082 15.4 6.6 1.1 1 0 0 1 1 1 1 Dynamin central region DUF1664 PF07889.12 ORF38692 - 0.0065 16.5 7.5 0.39 10.8 0.3 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) Phage_GP20 PF06810.11 ORF38692 - 0.0095 15.7 15.9 0.11 12.3 10.1 2.1 1 1 1 2 2 2 1 Phage minor structural protein GP20 Laminin_II PF06009.12 ORF38692 - 0.0099 15.9 7.4 0.029 14.4 7.4 1.8 1 1 0 1 1 1 1 Laminin Domain II EzrA PF06160.12 ORF38692 - 0.011 14.0 11.5 0.015 13.5 11.5 1.2 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Dor1 PF04124.12 ORF38692 - 0.012 14.3 5.6 0.015 14.0 5.6 1.1 1 0 0 1 1 1 0 Dor1-like family GAS PF13851.6 ORF38692 - 0.012 14.9 14.0 0.028 13.8 14.0 1.5 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding GOLGA2L5 PF15070.6 ORF38692 - 0.013 14.2 5.1 0.015 14.0 5.1 1.1 1 0 0 1 1 1 0 Putative golgin subfamily A member 2-like protein 5 MAD PF05557.13 ORF38692 - 0.015 13.7 11.9 0.017 13.6 11.9 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein Myosin_tail_1 PF01576.19 ORF38692 - 0.015 13.2 11.0 0.017 13.0 11.0 1.0 1 0 0 1 1 1 0 Myosin tail WXG100 PF06013.12 ORF38692 - 0.017 15.4 2.0 6.7 7.0 0.2 2.9 1 1 2 3 3 3 0 Proteins of 100 residues with WXG CEP63 PF17045.5 ORF38692 - 0.018 15.0 9.8 0.021 14.7 9.8 1.1 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa Baculo_PEP_C PF04513.12 ORF38692 - 0.018 15.1 2.0 0.035 14.1 2.0 1.5 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus CdvA PF18822.1 ORF38692 - 0.018 14.8 14.0 0.13 12.0 14.0 1.9 1 1 0 1 1 1 0 CdvA-like coiled-coil domain TolA_bind_tri PF16331.5 ORF38692 - 0.021 14.9 1.8 1.7 8.8 0.1 2.4 2 0 0 2 2 2 0 TolA binding protein trimerisation TPD52 PF04201.15 ORF38692 - 0.021 14.4 5.4 0.028 14.0 5.4 1.3 1 0 0 1 1 1 0 Tumour protein D52 family DUF948 PF06103.11 ORF38692 - 0.022 15.0 3.1 0.4 11.0 0.6 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) ATG16 PF08614.11 ORF38692 - 0.024 14.9 6.7 0.034 14.4 6.7 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Apolipoprotein PF01442.18 ORF38692 - 0.024 14.5 5.0 0.059 13.2 5.1 1.6 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain TPR_MLP1_2 PF07926.12 ORF38692 - 0.024 14.7 13.8 0.29 11.2 10.7 2.9 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein TMPIT PF07851.13 ORF38692 - 0.027 13.7 12.0 0.21 10.8 0.6 2.0 1 1 1 2 2 2 0 TMPIT-like protein zf-RING_UBOX PF13445.6 ORF38692 - 0.031 14.3 3.1 0.061 13.4 3.1 1.5 1 0 0 1 1 1 0 RING-type zinc-finger DUF4407 PF14362.6 ORF38692 - 0.034 13.5 2.4 0.039 13.3 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF724 PF05266.14 ORF38692 - 0.036 13.9 11.2 0.015 15.1 8.7 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF724) BRCA-2_OB3 PF09104.10 ORF38692 - 0.036 13.7 2.6 0.091 12.4 0.7 2.0 1 1 1 2 2 2 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 DMPK_coil PF08826.10 ORF38692 - 0.038 14.1 9.3 2.3 8.4 3.3 2.9 1 1 1 2 2 2 0 DMPK coiled coil domain like zf-C3HC4_2 PF13923.6 ORF38692 - 0.045 13.6 1.7 0.075 12.9 1.7 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) TRPM_tetra PF16519.5 ORF38692 - 0.047 13.8 8.8 0.25 11.5 0.8 3.1 1 1 3 4 4 4 0 Tetramerisation domain of TRPM Armet PF10208.9 ORF38692 - 0.052 13.5 4.5 0.068 13.1 4.5 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding Leu_zip PF15294.6 ORF38692 - 0.053 13.0 14.5 0.063 12.8 14.5 1.0 1 0 0 1 1 1 0 Leucine zipper DUF4404 PF14357.6 ORF38692 - 0.055 14.1 3.4 0.12 13.0 2.7 1.8 1 1 1 2 2 1 0 Domain of unknown function (DUF4404) DUF2408 PF10303.9 ORF38692 - 0.065 13.8 7.1 0.088 13.4 7.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) NAP PF00956.18 ORF38692 - 0.067 12.3 5.9 0.053 12.7 4.8 1.5 1 1 0 1 1 1 0 Nucleosome assembly protein (NAP) SKA2 PF16740.5 ORF38692 - 0.08 12.7 8.6 0.14 12.0 3.0 2.3 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 zf-C3HC4 PF00097.25 ORF38692 - 0.082 12.8 2.2 0.16 11.9 2.2 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) CENP-H PF05837.12 ORF38692 - 0.083 13.3 10.7 0.81 10.1 10.8 2.1 1 1 0 1 1 1 0 Centromere protein H (CENP-H) Exonuc_VII_L PF02601.15 ORF38692 - 0.084 12.4 5.2 0.097 12.2 5.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit GrpE PF01025.19 ORF38692 - 0.091 12.4 14.3 0.092 12.4 2.5 2.0 1 1 1 2 2 2 0 GrpE APG17 PF04108.12 ORF38692 - 0.096 11.8 9.1 0.43 9.6 9.2 1.7 1 1 0 1 1 1 0 Autophagy protein Apg17 Synaptobrevin PF00957.21 ORF38692 - 0.12 12.1 5.2 5.3 6.9 2.9 2.9 1 1 1 2 2 2 0 Synaptobrevin AAA_13 PF13166.6 ORF38692 - 0.12 10.9 10.3 0.14 10.7 10.3 1.0 1 0 0 1 1 1 0 AAA domain DUF2935 PF11155.8 ORF38692 - 0.13 12.6 4.0 0.17 12.2 4.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) UPF0242 PF06785.11 ORF38692 - 0.13 12.4 12.5 0.19 11.8 11.7 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3037 PF11236.8 ORF38692 - 0.18 12.2 1.0 0.32 11.4 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3037) Fzo_mitofusin PF04799.13 ORF38692 - 0.2 11.2 5.9 0.21 11.1 4.4 1.7 1 1 1 2 2 2 0 fzo-like conserved region HOOK PF05622.12 ORF38692 - 0.22 9.6 13.4 0.81 7.8 0.4 2.0 1 1 1 2 2 2 0 HOOK protein KxDL PF10241.9 ORF38692 - 0.25 11.7 12.6 0.16 12.2 5.7 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein MRPL52 PF18699.1 ORF38692 - 0.25 11.5 7.7 0.092 12.9 3.6 1.9 2 0 0 2 2 2 0 Mitoribosomal protein mL52 DUF883 PF05957.13 ORF38692 - 0.34 11.5 2.4 0.61 10.7 1.2 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Lectin_N PF03954.14 ORF38692 - 0.34 10.6 8.3 1.3 8.8 2.1 2.1 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain DUF1943 PF09172.11 ORF38692 - 0.36 10.0 7.4 0.39 9.9 7.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) 60KD_IMP PF02096.20 ORF38692 - 0.37 10.7 7.5 0.26 11.2 1.6 2.1 1 1 1 2 2 2 0 60Kd inner membrane protein YlqD PF11068.8 ORF38692 - 0.4 11.1 8.4 0.75 10.2 8.4 1.4 1 1 0 1 1 1 0 YlqD protein DUF1640 PF07798.11 ORF38692 - 0.41 10.7 12.9 4.1 7.4 12.8 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) DUF2130 PF09903.9 ORF38692 - 0.42 9.8 13.1 0.83 8.9 0.6 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2130) OmpH PF03938.14 ORF38692 - 0.49 10.7 12.8 3 8.2 12.8 1.9 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Atg14 PF10186.9 ORF38692 - 0.49 9.4 8.6 0.59 9.2 8.3 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMF_TATA_bd PF12325.8 ORF38692 - 0.54 10.5 13.2 3.3 8.0 3.2 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding ADIP PF11559.8 ORF38692 - 0.58 10.2 11.6 1.5 8.9 5.6 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DASH_Dam1 PF08653.10 ORF38692 - 0.62 9.9 3.2 4 7.3 0.3 2.6 2 1 0 2 2 2 0 DASH complex subunit Dam1 TMF_DNA_bd PF12329.8 ORF38692 - 0.7 9.9 19.2 2.5 8.1 1.0 3.4 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF3552 PF12072.8 ORF38692 - 0.74 9.2 12.6 0.93 8.9 10.8 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF16 PF01519.16 ORF38692 - 0.79 10.2 10.9 1.8 9.1 10.9 1.6 1 1 0 1 1 1 0 Protein of unknown function DUF16 Snapin_Pallidin PF14712.6 ORF38692 - 0.92 10.0 9.8 2.9 8.4 0.2 2.2 1 1 1 2 2 2 0 Snapin/Pallidin Aida_N PF08910.10 ORF38692 - 0.94 9.9 4.4 1.1 9.7 3.5 1.4 1 1 0 1 1 1 0 Aida N-terminus DUF745 PF05335.13 ORF38692 - 1.1 8.9 5.8 1.5 8.5 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF745) CREPT PF16566.5 ORF38692 - 1.2 9.4 11.5 5.2 7.2 5.4 2.2 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour V_ATPase_I PF01496.19 ORF38692 - 1.2 7.0 7.6 1.5 6.7 7.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CLZ PF16526.5 ORF38692 - 1.4 9.4 8.4 14 6.1 3.4 2.4 1 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF148 PF02520.17 ORF38692 - 1.6 8.8 11.6 1.9 8.6 5.0 2.2 1 1 1 2 2 2 0 Domain of unknown function DUF148 Jnk-SapK_ap_N PF09744.9 ORF38692 - 1.9 8.7 12.1 8.7 6.6 12.1 1.8 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Fib_alpha PF08702.10 ORF38692 - 2 8.6 11.2 1.6 8.9 8.8 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4795 PF16043.5 ORF38692 - 2.1 7.9 13.3 9 5.8 12.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) APG6_N PF17675.1 ORF38692 - 2.1 8.9 12.8 4.2 7.9 12.8 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF730 PF05325.11 ORF38692 - 2.4 8.2 6.7 0.49 10.4 1.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF730) Prefoldin PF02996.17 ORF38692 - 2.6 8.0 13.5 4.7 7.1 0.7 3.1 1 1 2 3 3 3 0 Prefoldin subunit ZapB PF06005.12 ORF38692 - 2.8 8.4 10.1 1.7 9.2 0.3 2.4 1 1 0 2 2 2 0 Cell division protein ZapB HIP1_clath_bdg PF16515.5 ORF38692 - 3.6 8.2 10.3 5.1 7.8 6.8 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 PCRF PF03462.18 ORF38692 - 4.4 7.1 7.7 7.4 6.4 7.6 1.4 1 1 0 1 1 1 0 PCRF domain Prefoldin_2 PF01920.20 ORF38692 - 5.8 6.9 18.3 2.8 8.0 3.4 2.9 1 1 2 3 3 3 0 Prefoldin subunit bZIP_1 PF00170.21 ORF38692 - 6.4 7.0 16.2 1.5 9.0 2.7 3.5 1 1 2 3 3 3 0 bZIP transcription factor ACCA PF03255.14 ORF38692 - 6.7 6.6 10.0 3.6 7.5 3.2 2.1 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BST2 PF16716.5 ORF38692 - 6.9 7.3 10.9 13 6.5 4.1 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 FAM76 PF16046.5 ORF38692 - 9.7 5.4 14.4 4.4 6.6 5.4 2.0 1 1 1 2 2 2 0 FAM76 protein RNase_J_C PF17770.1 ORF38692 - 9.9 7.3 7.2 12 7.1 0.8 2.4 1 1 1 2 2 2 0 Ribonuclease J C-terminal domain Ribosomal_L27e PF01777.18 ORF36965 - 1.3e-23 83.1 8.5 1.9e-23 82.6 8.5 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 ORF36965 - 0.019 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 KOW motif Abhydrolase_1 PF00561.20 ORF36507 - 2.7e-05 24.0 0.1 2.8e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Organ_specific PF10950.8 ORF3633 - 0.093 13.4 1.6 0.14 12.9 1.6 1.3 1 1 0 1 1 1 0 Organ specific protein YEATS PF03366.16 ORF36128 - 3.1e-10 39.9 0.4 5.7e-10 39.0 0.4 1.5 1 0 0 1 1 1 1 YEATS family PilA4 PF18682.1 ORF35759 - 0.16 12.3 1.9 4.5 7.7 0.1 2.2 2 0 0 2 2 2 0 Pilin A4 Ribosomal_S3_C PF00189.20 ORF34970 - 6.1e-23 81.1 2.9 7.4e-23 80.9 2.9 1.1 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain SNARE_assoc PF09335.11 ORF34356 - 7.1e-21 74.9 6.6 7.1e-21 74.9 6.6 1.5 2 0 0 2 2 2 1 SNARE associated Golgi protein PPR_2 PF13041.6 ORF33812 - 1.5e-06 28.2 0.0 0.026 14.7 0.0 2.8 1 1 3 4 4 4 3 PPR repeat family PPR_3 PF13812.6 ORF33812 - 1.9e-06 27.8 0.0 0.0062 16.6 0.0 2.5 1 1 2 3 3 3 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF33812 - 0.0003 20.8 0.3 0.018 15.2 0.0 3.4 4 0 0 4 4 4 1 PPR repeat PPR_1 PF12854.7 ORF33812 - 0.014 15.1 0.0 0.47 10.2 0.0 2.3 2 0 0 2 2 2 0 PPR repeat Sde2_N_Ubi PF13019.6 ORF329 - 3.7e-20 72.4 0.2 4.3e-20 72.2 0.2 1.1 1 0 0 1 1 1 1 Silencing defective 2 N-terminal ubiquitin domain S1 PF00575.23 ORF3124 - 2.2e-09 37.6 0.7 0.00084 19.6 0.0 3.0 2 1 0 2 2 2 2 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF3124 - 3.5e-08 33.3 1.1 0.00031 20.6 0.3 2.6 2 1 0 2 2 2 2 RNase II-type exonuclease C-terminal S1 domain MoeA_C PF03454.15 ORF3124 - 0.00067 19.8 0.2 0.011 15.9 0.0 2.4 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) TOBE_2 PF08402.10 ORF3124 - 0.0049 17.0 0.4 0.16 12.2 0.1 2.7 2 1 1 3 3 3 1 TOBE domain DUF3016 PF11454.8 ORF3124 - 0.03 14.1 0.0 1.3 8.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3016) RHH_4 PF13467.6 ORF30765 - 0.16 11.8 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Ribbon-helix-helix domain Proteasom_PSMB PF10508.9 ORF29433 - 4.3e-08 32.1 0.5 4.8e-08 31.9 0.5 1.0 1 0 0 1 1 1 1 Proteasome non-ATPase 26S subunit DUF5540 PF17694.1 ORF29232 - 0.32 11.5 2.9 0.29 11.7 1.1 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5540) DBINO PF13892.6 ORF2905 - 0.019 15.3 2.9 0.028 14.8 2.6 1.4 1 1 0 1 1 1 0 DNA-binding domain DUF1604 PF07713.13 ORF28924 - 0.027 14.3 0.0 0.065 13.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) Abhydrolase_1 PF00561.20 ORF28783 - 2.7e-05 24.0 0.1 2.8e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_1 PF00561.20 ORF28204 - 2.7e-05 24.0 0.1 2.8e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold PPR PF01535.20 ORF26954 - 0.018 15.3 0.0 0.052 13.8 0.0 1.8 1 0 0 1 1 1 0 PPR repeat DUF2492 PF10678.9 ORF26954 - 0.079 13.2 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) MciZ PF13072.6 ORF26932 - 0.15 11.9 6.2 1.1 9.1 0.1 2.8 3 0 0 3 3 3 0 Mother cell inhibitor of FtsZ ABC_trans_aux PF03886.13 ORF26733 - 0.027 14.1 0.2 0.048 13.3 0.2 1.4 1 0 0 1 1 1 0 ABC-type transport auxiliary lipoprotein component DUF5540 PF17694.1 ORF26430 - 0.32 11.5 2.9 0.29 11.7 1.1 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5540) LRR_RI_capping PF18779.1 ORF26131 - 8.1 6.2 6.8 38 4.1 0.1 3.2 3 0 0 3 3 3 0 Capping Ribonuclease inhibitor Leucine Rich Repeat YdjM PF04307.14 ORF25977 - 0.16 11.3 5.3 0.21 10.9 5.1 1.3 1 1 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase hSH3 PF14603.6 ORF25580 - 0.0067 16.8 0.4 0.0067 16.8 0.4 1.6 2 0 0 2 2 2 1 Helically-extended SH3 domain N6_Mtase PF02384.16 ORF25580 - 0.027 13.8 3.3 0.02 14.2 2.0 1.5 1 1 0 1 1 1 0 N-6 DNA Methylase CDC45 PF02724.14 ORF25548 - 0.015 13.6 2.3 0.016 13.6 2.3 1.0 1 0 0 1 1 1 0 CDC45-like protein TFIIF_alpha PF05793.12 ORF25548 - 0.055 12.1 16.1 0.065 11.8 16.1 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Presenilin PF01080.17 ORF25548 - 0.061 12.1 3.2 0.07 11.9 3.2 1.2 1 0 0 1 1 1 0 Presenilin DNA_pol_phi PF04931.13 ORF25548 - 0.062 11.4 8.0 0.079 11.1 8.0 1.0 1 0 0 1 1 1 0 DNA polymerase phi SLC12 PF03522.15 ORF25548 - 0.077 12.0 2.9 0.083 11.9 2.9 1.0 1 0 0 1 1 1 0 Solute carrier family 12 SR-25 PF10500.9 ORF25548 - 0.17 11.5 18.1 0.21 11.2 18.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein NPR3 PF03666.13 ORF25548 - 0.27 10.0 4.3 0.3 9.8 4.3 1.3 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF3827 PF12877.7 ORF25548 - 0.54 8.6 10.5 0.66 8.3 10.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) RR_TM4-6 PF06459.12 ORF25548 - 3.9 7.2 10.0 4.4 7.0 10.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CCDC106 PF15794.5 ORF25548 - 4.1 7.0 16.5 4.9 6.8 16.5 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Aminotran_5 PF00266.19 ORF2552 - 1.6e-29 103.0 0.1 1.9e-29 102.8 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class-V TamB PF04357.13 ORF2517 - 0.0069 15.7 1.7 0.0078 15.5 1.7 1.1 1 0 0 1 1 1 1 TamB, inner membrane protein subunit of TAM complex Flexi_CP_N PF08358.10 ORF2517 - 0.058 13.4 0.1 0.17 11.9 0.1 1.8 1 0 0 1 1 1 0 Carlavirus coat Phasin PF05597.11 ORF2517 - 0.084 12.9 0.4 0.15 12.1 0.3 1.5 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Abhydrolase_1 PF00561.20 ORF22134 - 0.0011 18.7 0.1 0.0012 18.6 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold VIR_N PF15912.5 ORF21457 - 0.017 14.8 12.6 0.019 14.6 12.6 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal Fer2 PF00111.27 ORF2134 - 3e-10 39.9 1.2 4.5e-10 39.3 1.2 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 ORF2134 - 0.32 11.1 3.2 1.1 9.3 2.2 2.3 2 1 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain DnaJ PF00226.31 ORF21022 - 2.4e-16 59.6 1.6 3.5e-16 59.1 1.6 1.3 1 0 0 1 1 1 1 DnaJ domain NAPRTase PF04095.16 ORF20097 - 9.5e-14 51.6 0.1 9.5e-14 51.6 0.1 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family Ribosomal_L13 PF00572.18 ORF18952 - 4.5e-57 191.7 0.3 5.2e-57 191.5 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L13 IMS_C PF11799.8 ORF18952 - 0.097 13.4 0.0 0.12 13.1 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family C-terminal domain OTU PF02338.19 ORF18378 - 4.4e-22 78.9 0.0 5.8e-22 78.5 0.0 1.2 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF18378 - 3.7e-05 23.3 0.0 0.013 14.9 0.0 2.1 2 0 0 2 2 2 2 Peptidase C65 Otubain Cation_ATPase PF13246.6 ORF17755 - 1.2e-08 34.9 0.1 1.9e-08 34.3 0.1 1.4 1 0 0 1 1 1 1 Cation transport ATPase (P-type) PAS_9 PF13426.7 ORF17109 - 0.039 14.2 0.2 0.057 13.7 0.2 1.3 1 0 0 1 1 1 0 PAS domain Abhydrolase_1 PF00561.20 ORF16860 - 1.8e-05 24.5 0.1 1.9e-05 24.4 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold UQ_con PF00179.26 ORF15750 - 1.4e-41 141.4 0.0 1.6e-41 141.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF15750 - 0.0025 17.5 0.0 0.003 17.3 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B Nucleotid_trans PF03407.16 ORF14418 - 0.15 12.0 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Nucleotide-diphospho-sugar transferase NCD1 PF04904.13 ORF1409 - 8.3 6.5 16.7 11 6.1 0.4 4.3 4 0 0 4 4 4 0 NAB conserved region 1 (NCD1) SHIPPO-rpt PF07004.12 ORF111695 - 6.2e-05 23.7 6.1 0.021 15.7 0.0 2.9 3 1 0 3 3 3 2 Sperm-tail PG-rich repeat IMD PF08397.11 ORF111117 - 0.032 13.6 7.2 0.038 13.4 7.2 1.2 1 0 0 1 1 1 0 IRSp53/MIM homology domain RRN3 PF05327.11 ORF111117 - 0.49 8.9 10.9 0.6 8.6 10.9 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 cNMP_binding PF00027.29 ORF110712 - 5.9e-15 55.1 0.0 7.3e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain zf-CCHC PF00098.23 ORF110712 - 0.00016 21.6 0.7 0.00025 21.0 0.7 1.3 1 0 0 1 1 1 1 Zinc knuckle Seryl_tRNA_N PF02403.22 ORF110347 - 0.036 14.3 0.1 0.067 13.4 0.1 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Abhydrolase_4 PF08386.10 ORF109634 - 1.5e-11 44.3 0.1 5.3e-09 36.1 0.0 2.1 1 1 1 2 2 2 2 TAP-like protein Fn3-like PF14310.6 ORF109133 - 4.4e-09 36.3 0.0 1e-08 35.1 0.0 1.6 2 0 0 2 2 2 1 Fibronectin type III-like domain Fungal_lectin_2 PF18647.1 ORF108968 - 0.062 13.8 2.5 0.1 13.1 2.5 1.4 1 0 0 1 1 1 0 Alpha-galactosyl-binding fungal lectin DUF5576 PF17739.1 ORF106736 - 0.042 13.9 0.5 0.06 13.5 0.5 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5576) KIAA1430 PF13879.6 ORF106181 - 0.011 16.5 8.0 0.84 10.4 2.8 2.1 2 0 0 2 2 2 0 KIAA1430 homologue DUF3552 PF12072.8 ORF106181 - 0.048 13.1 1.2 0.072 12.5 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) Peptidase_M3_N PF08439.10 ORF106181 - 0.048 13.9 2.4 6.3 7.1 0.0 2.9 3 0 0 3 3 3 0 Oligopeptidase F LRR_6 PF13516.6 ORF103465 - 3.1e-11 42.4 9.7 0.064 13.3 0.0 5.3 5 0 0 5 5 5 4 Leucine Rich repeat LRR_4 PF12799.7 ORF103465 - 4.6e-10 39.6 10.1 4.6e-05 23.7 3.1 3.5 3 0 0 3 3 3 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF103465 - 1.6e-08 34.1 14.4 0.022 14.5 1.9 4.6 1 1 3 4 4 4 4 Leucine rich repeat LRR_1 PF00560.33 ORF103465 - 6e-07 29.1 11.2 1.2 10.0 0.3 5.0 4 1 0 4 4 4 3 Leucine Rich Repeat zf-RING_2 PF13639.6 ORF102015 - 1.1e-09 38.5 5.8 1.5e-09 38.1 5.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF102015 - 2e-06 27.4 5.8 3.4e-06 26.7 5.8 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF102015 - 5.5e-05 23.1 5.2 9.1e-05 22.4 5.2 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF102015 - 8.8e-05 22.7 3.5 0.00015 22.0 3.5 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF102015 - 0.00019 21.2 5.9 0.00034 20.4 5.9 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF102015 - 0.00022 21.1 4.9 0.00034 20.4 4.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF102015 - 0.00036 20.4 4.4 0.00051 19.9 4.4 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF102015 - 0.00064 19.7 1.5 0.00095 19.2 1.5 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF102015 - 0.0045 16.6 5.0 0.0083 15.7 5.0 1.5 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF102015 - 0.0074 16.4 3.7 0.014 15.6 3.7 1.5 1 0 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 ORF102015 - 0.026 14.6 3.7 0.062 13.4 3.6 1.7 1 1 0 1 1 1 0 RING-variant domain CSD PF00313.22 ORF100414 - 2.7e-16 59.2 1.4 3.5e-09 36.4 0.1 2.5 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF100414 - 2.1e-05 24.1 2.2 0.079 12.7 0.1 2.8 3 1 0 3 3 3 2 Ribonuclease B OB domain DUF4867 PF16161.5 NODE_46177_length_421_cov_2.865285_g38371_i0reverse_frame_1 - 0.098 12.1 0.1 0.12 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4867) LBR_tudor PF09465.10 NODE_46177_length_421_cov_2.865285_g38371_i0forward_frame_1 - 0.00016 21.4 0.2 0.00036 20.3 0.2 1.5 1 0 0 1 1 1 1 Lamin-B receptor of TUDOR domain FGGY_C PF02782.16 NODE_46177_length_421_cov_2.865285_g38371_i0forward_frame_1 - 0.063 13.0 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain Molybdopterin PF00384.22 NODE_46175_length_421_cov_3.018135_g38369_i0forward_frame_1 - 1.1e-30 107.0 0.0 1.3e-30 106.8 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase DUF1493 PF07377.12 NODE_46173_length_421_cov_3.155440_g38367_i0reverse_frame_1 - 0.017 15.6 0.0 0.056 13.9 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1493) GWT1 PF06423.12 NODE_46172_length_421_cov_3.163212_g38366_i0reverse_frame_1 - 8.4 6.5 7.1 5.9 7.0 5.3 1.4 1 1 0 1 1 1 0 GWT1 RHS_repeat PF05593.14 NODE_46169_length_421_cov_3.505181_g38363_i0forward_frame_1 - 6e-21 74.5 23.6 1.5e-09 38.2 0.9 5.3 1 1 4 6 6 6 6 RHS Repeat GerE PF00196.19 NODE_46150_length_421_cov_89.163212_g38345_i0forward_frame_1 - 0.031 13.8 0.1 0.13 11.8 0.0 1.9 1 1 1 2 2 2 0 Bacterial regulatory proteins, luxR family PhrC_PhrF PF11131.8 NODE_46146_length_421_cov_104.404145_g38341_i0forward_frame_1 - 0.06 12.9 2.2 0.06 12.9 2.2 1.9 2 0 0 2 2 2 0 Rap-phr extracellular signalling Myb_DNA-bind_7 PF15963.5 NODE_46138_length_421_cov_210.020725_g38333_i0reverse_frame_1 - 1.2e-22 79.6 0.4 2e-22 78.9 0.4 1.3 1 0 0 1 1 1 1 Myb DNA-binding like Myb_DNA-binding PF00249.31 NODE_46138_length_421_cov_210.020725_g38333_i0reverse_frame_1 - 8.4e-08 32.3 0.3 6.7e-07 29.4 0.1 2.1 2 0 0 2 2 2 1 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 NODE_46138_length_421_cov_210.020725_g38333_i0reverse_frame_1 - 0.0001 22.4 0.4 0.00015 21.9 0.4 1.3 1 0 0 1 1 1 1 SANT/Myb-like domain of DAMP1 zf-met PF12874.7 NODE_46126_length_421_cov_14123.025907_g38322_i0reverse_frame_1 - 0.42 11.1 2.1 14 6.3 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type DUF1647 PF07801.11 NODE_46122_length_422_cov_1.431525_g38318_i0reverse_frame_1 - 0.016 15.0 0.3 0.023 14.4 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1647) MARVEL PF01284.23 NODE_46122_length_422_cov_1.431525_g38318_i0reverse_frame_1 - 0.025 14.6 0.1 0.032 14.3 0.1 1.2 1 0 0 1 1 1 0 Membrane-associating domain PBP1_TM PF14812.6 NODE_46122_length_422_cov_1.431525_g38318_i0forward_frame_1 - 0.0045 17.3 0.4 0.0068 16.7 0.4 1.2 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks159.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks159.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks159.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks159.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Mating_C PF12737.7 NODE_7454_length_1527_cov_226.849196_g5473_i0reverse_frame_2 - 4.6e-06 26.1 38.7 2.6 7.2 0.8 10.1 1 1 10 11 11 11 9 C-terminal domain of homeodomain 1 Penaeidin PF05927.11 NODE_7454_length_1527_cov_226.849196_g5473_i0reverse_frame_2 - 0.028 15.2 79.4 5.8 7.7 0.3 11.4 9 2 2 11 11 11 0 Penaeidin Ribosomal_S14 PF00253.21 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_3 - 0.3 10.9 19.7 32 4.4 0.1 5.5 5 0 0 5 5 5 0 Ribosomal protein S14p/S29e zf-C2H2_11 PF16622.5 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_3 - 0.56 10.0 15.4 73 3.2 0.1 6.1 5 0 0 5 5 5 0 zinc-finger C2H2-type zf-LSD1 PF06943.12 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_3 - 0.67 9.8 28.9 17 5.3 0.7 6.4 5 0 0 5 5 5 0 LSD1 zinc finger zinc_ribbon_4 PF13717.6 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_3 - 3.5 7.6 15.7 1.1e+02 2.8 0.1 5.6 5 0 0 5 5 5 0 zinc-ribbon domain DUF4431 PF14485.6 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_2 - 0.00044 20.0 0.1 18 5.2 0.0 3.5 3 0 0 3 3 3 3 Domain of unknown function (DUF4431) 4HPAD_g_N PF18671.1 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_2 - 0.0012 18.4 7.2 74 3.2 0.0 6.3 7 0 0 7 7 7 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal DUF772 PF05598.11 NODE_7454_length_1527_cov_226.849196_g5473_i0forward_frame_2 - 0.0017 18.3 0.1 93 3.2 0.0 4.8 5 0 0 5 5 5 0 Transposase domain (DUF772) Cpn60_TCP1 PF00118.24 ORF9366 - 2.8e-155 517.7 3.2 3.2e-155 517.5 3.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Imm3 PF14425.6 ORF9366 - 0.11 12.5 0.0 0.29 11.2 0.0 1.7 1 0 0 1 1 1 0 Immunity protein Imm3 ATP-synt_I PF03899.15 ORF913 - 0.018 15.4 1.6 1.7 9.0 0.3 2.2 2 0 0 2 2 2 0 ATP synthase I chain Bestrophin PF01062.21 ORF913 - 0.056 12.8 0.0 0.099 12.0 0.0 1.4 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel ATP-synt_I PF03899.15 ORF87516 - 0.018 15.4 1.6 1.7 9.0 0.3 2.2 2 0 0 2 2 2 0 ATP synthase I chain Bestrophin PF01062.21 ORF87516 - 0.056 12.8 0.0 0.099 12.0 0.0 1.4 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel ABC_tran PF00005.27 ORF84596 - 2.9e-15 57.0 0.0 8.1e-15 55.5 0.0 1.8 1 1 0 1 1 1 1 ABC transporter ABC_membrane_2 PF06472.15 ORF84596 - 1.3e-13 51.0 0.2 5.4e-13 49.0 0.0 1.9 2 0 0 2 2 2 1 ABC transporter transmembrane region 2 SbmA_BacA PF05992.12 ORF84596 - 7e-09 35.5 0.0 1e-08 35.0 0.0 1.1 1 0 0 1 1 1 1 SbmA/BacA-like family AAA_29 PF13555.6 ORF84596 - 0.0012 18.6 0.1 0.0036 17.0 0.0 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_21 PF13304.6 ORF84596 - 0.005 16.7 0.5 0.44 10.3 0.0 2.2 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF84596 - 0.0055 16.1 0.0 0.012 15.0 0.0 1.5 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_16 PF13191.6 ORF84596 - 0.042 14.2 0.2 0.27 11.6 0.0 2.4 2 0 0 2 2 2 0 AAA ATPase domain AAA_28 PF13521.6 ORF84596 - 0.057 13.7 0.1 0.16 12.2 0.1 1.7 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 ORF84596 - 0.057 12.6 0.0 0.09 11.9 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_33 PF13671.6 ORF84596 - 0.1 12.7 0.1 0.3 11.3 0.1 1.7 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF84596 - 0.11 12.9 0.6 0.19 12.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 ORF84596 - 0.12 12.0 0.3 0.41 10.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain PKcGMP_CC PF16808.5 ORF82715 - 0.08 12.8 0.6 0.08 12.8 0.6 4.2 4 1 1 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase LPP PF04728.13 ORF82715 - 0.43 11.0 3.3 4.4 7.8 0.1 3.4 2 1 0 2 2 2 0 Lipoprotein leucine-zipper OmpH PF03938.14 ORF82715 - 0.99 9.7 21.0 0.045 14.1 1.0 3.5 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) TMF_TATA_bd PF12325.8 ORF82715 - 2.8 8.2 22.8 0.81 9.9 5.5 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 TATA binding Spc7 PF08317.11 ORF82715 - 8.4 5.2 24.1 1.2 7.9 6.2 3.1 3 0 0 3 3 3 0 Spc7 kinetochore protein PolyA_pol PF01743.20 ORF75092 - 9.3e-30 103.7 0.9 1.8e-29 102.7 0.1 1.9 2 0 0 2 2 2 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 ORF75092 - 0.017 14.9 0.0 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 Probable RNA and SrmB- binding site of polymerase A tRNA_NucTran2_2 PF13735.6 ORF75092 - 0.15 12.1 0.8 0.78 9.7 0.8 2.2 1 1 0 1 1 1 0 tRNA nucleotidyltransferase domain 2 putative IQ PF00612.27 ORF70368 - 2.4 8.2 6.8 0.29 11.0 0.5 2.8 3 0 0 3 3 3 0 IQ calmodulin-binding motif ATP-synt_I PF03899.15 ORF56489 - 0.018 15.4 1.6 1.7 9.0 0.3 2.2 2 0 0 2 2 2 0 ATP synthase I chain Bestrophin PF01062.21 ORF56489 - 0.056 12.8 0.0 0.099 12.0 0.0 1.4 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel Coatomer_WDAD PF04053.14 ORF37688 - 4.4e-09 35.9 13.3 1.7e-06 27.4 0.0 3.8 3 1 1 4 4 4 3 Coatomer WD associated region Clathrin PF00637.20 ORF37688 - 1.7e-06 27.9 15.0 3.2e-05 23.8 2.9 4.9 3 2 3 6 6 6 3 Region in Clathrin and VPS TPR_7 PF13176.6 ORF37688 - 0.002 18.0 10.1 0.64 10.2 0.2 6.2 4 2 2 6 6 6 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF37688 - 0.43 10.8 22.7 0.24 11.6 0.6 7.1 6 1 0 6 6 6 0 Tetratricopeptide repeat VSP PF03302.13 ORF36118 - 9.7 4.9 70.8 0.016 14.1 36.5 3.6 2 1 2 4 4 4 0 Giardia variant-specific surface protein Coatomer_WDAD PF04053.14 ORF34619 - 4.4e-09 35.9 13.3 1.7e-06 27.4 0.0 3.8 3 1 1 4 4 4 3 Coatomer WD associated region Clathrin PF00637.20 ORF34619 - 1.7e-06 27.9 15.0 3.2e-05 23.8 2.9 4.9 3 2 3 6 6 6 3 Region in Clathrin and VPS TPR_7 PF13176.6 ORF34619 - 0.002 18.0 10.1 0.64 10.2 0.2 6.2 4 2 2 6 6 6 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF34619 - 0.43 10.8 22.7 0.24 11.6 0.6 7.1 6 1 0 6 6 6 0 Tetratricopeptide repeat VSP PF03302.13 ORF1793 - 4.1 6.1 69.3 0.016 14.1 36.4 3.6 2 1 2 4 4 4 0 Giardia variant-specific surface protein ATP-synt_I PF03899.15 ORF105804 - 0.018 15.4 1.6 1.7 9.0 0.3 2.2 2 0 0 2 2 2 0 ATP synthase I chain Bestrophin PF01062.21 ORF105804 - 0.056 12.8 0.0 0.099 12.0 0.0 1.4 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel DUF3053 PF11254.8 NODE_7578_length_1520_cov_56.575084_g5183_i1forward_frame_1 - 0.076 12.6 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3053) DUF4201 PF13870.6 ORF84798 - 0.0091 15.7 7.5 0.0091 15.7 7.5 4.3 1 1 3 4 4 4 1 Domain of unknown function (DUF4201) FlaC_arch PF05377.11 ORF84798 - 0.031 14.7 2.1 0.031 14.7 2.1 6.3 5 1 1 6 6 6 0 Flagella accessory protein C (FlaC) RPEL PF02755.15 ORF84798 - 0.21 11.4 0.2 0.21 11.4 0.2 2.8 2 0 0 2 2 2 0 RPEL repeat TPR_MLP1_2 PF07926.12 ORF84798 - 8 6.5 58.4 9.5 6.3 0.1 5.6 2 2 2 5 5 5 0 TPR/MLP1/MLP2-like protein Peptidase_S28 PF05577.12 ORF74695 - 6.3e-84 282.3 1.8 7.5e-84 282.0 1.8 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF74695 - 8.4e-09 35.2 0.1 3.1e-08 33.4 0.0 2.0 2 1 0 2 2 2 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF74695 - 9.1e-08 31.6 0.0 1.4e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF74695 - 1.5e-05 24.8 0.0 2.3e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Tannase PF07519.11 ORF74695 - 0.00073 18.6 0.5 0.0012 17.9 0.5 1.3 1 0 0 1 1 1 1 Tannase and feruloyl esterase Peptidase_S37 PF05576.11 ORF74695 - 0.0034 16.1 1.0 0.0047 15.7 0.1 1.7 3 0 0 3 3 3 1 PS-10 peptidase S37 DUF2920 PF11144.8 ORF74695 - 0.0071 15.6 0.2 0.014 14.6 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2920) PGAP1 PF07819.13 ORF74695 - 0.023 14.4 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein DUF3141 PF11339.8 ORF74695 - 0.026 13.0 0.0 0.041 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3141) Esterase PF00756.20 ORF74695 - 0.05 13.2 0.0 0.11 12.2 0.0 1.5 1 1 0 1 1 1 0 Putative esterase Esterase_phd PF10503.9 ORF74695 - 0.087 12.3 0.0 0.17 11.4 0.0 1.4 1 1 0 1 1 1 0 Esterase PHB depolymerase Abhydrolase_6 PF12697.7 ORF74695 - 0.11 13.1 0.0 0.2 12.3 0.0 1.6 2 0 0 2 2 1 0 Alpha/beta hydrolase family Rol_Rep_N PF18106.1 ORF74695 - 0.12 12.7 0.4 9.5 6.6 0.1 2.7 2 0 0 2 2 2 0 Rolling Circle replication initiation protein N-terminal domain Kinesin PF00225.23 ORF72052 - 3e-50 171.0 0.0 5.6e-50 170.2 0.0 1.4 1 1 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF72052 - 2e-10 40.8 0.0 3.8e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding SAM_PNT PF02198.16 ORF72052 - 0.00013 21.8 0.0 0.00026 20.9 0.0 1.4 1 0 0 1 1 1 1 Sterile alpha motif (SAM)/Pointed domain AAA_16 PF13191.6 ORF72052 - 0.002 18.5 1.8 0.012 15.9 1.8 2.3 1 1 0 1 1 1 1 AAA ATPase domain Bac_DnaA PF00308.18 ORF72052 - 0.01 15.7 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_22 PF13401.6 ORF72052 - 0.011 16.0 0.0 0.027 14.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain SAM_3 PF18016.1 ORF72052 - 0.012 15.4 0.0 0.057 13.2 0.0 2.1 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) Zeta_toxin PF06414.12 ORF72052 - 0.021 14.1 0.1 0.048 12.9 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 ORF72052 - 0.055 13.2 0.5 0.11 12.2 0.5 1.4 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF72052 - 0.13 12.3 0.1 0.24 11.4 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain DUF815 PF05673.13 ORF72052 - 0.18 10.9 0.0 0.3 10.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) rRNA_proc-arch PF13234.6 ORF71677 - 1.9e-60 205.1 0.7 1.9e-60 205.1 0.7 1.6 2 0 0 2 2 2 1 rRNA-processing arch domain DSHCT PF08148.12 ORF71677 - 7.6e-47 159.0 1.0 7.6e-47 159.0 1.0 2.0 2 0 0 2 2 2 1 DSHCT (NUC185) domain DWNN PF08783.11 ORF61354 - 0.18 12.1 1.8 0.77 10.1 1.8 2.2 1 0 0 1 1 1 0 DWNN domain Ion_trans PF00520.31 ORF58985 - 9.9e-18 64.3 12.1 2e-17 63.2 11.7 1.6 1 1 1 2 2 2 1 Ion transport protein EF-hand_1 PF00036.32 ORF58985 - 3.2e-10 38.8 0.8 0.00019 20.8 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF58985 - 1.2e-09 37.3 2.8 2.4e-05 23.9 0.0 3.1 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF58985 - 1.2e-08 35.3 0.3 3.3e-08 33.9 0.3 1.9 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF58985 - 1.4e-05 24.4 4.1 0.0028 17.1 0.0 3.1 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF58985 - 1.7e-05 24.6 2.6 0.02 14.8 0.0 2.5 1 1 1 2 2 2 2 EF-hand domain pair Caleosin PF05042.13 ORF58985 - 0.13 12.2 0.0 0.3 11.0 0.0 1.7 1 0 0 1 1 1 0 Caleosin related protein FlaC_arch PF05377.11 ORF58643 - 0.031 14.7 2.1 0.031 14.7 2.1 6.1 5 1 1 7 7 7 0 Flagella accessory protein C (FlaC) ERM PF00769.19 ORF58643 - 9 6.0 54.3 0.023 14.5 6.5 3.3 2 1 1 3 3 3 0 Ezrin/radixin/moesin family LBP_BPI_CETP_C PF02886.17 ORF25247 - 5e-06 26.1 0.6 8e-06 25.5 0.6 1.3 1 0 0 1 1 1 1 LBP / BPI / CETP family, C-terminal domain AA_permease_2 PF13520.6 ORF14970 - 2.7e-39 135.2 22.4 3.7e-39 134.8 22.4 1.1 1 0 0 1 1 1 1 Amino acid permease DUF3681 PF12442.8 ORF14970 - 8.8 6.9 8.2 0.66 10.5 1.4 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3681) Arm PF00514.23 ORF110173 - 2.1e-36 122.8 22.7 7.1e-10 38.6 0.0 8.3 9 0 0 9 9 9 5 Armadillo/beta-catenin-like repeat HEAT PF02985.22 ORF110173 - 4.8e-19 66.8 11.5 0.00014 21.8 0.0 7.7 8 0 0 8 8 7 5 HEAT repeat HEAT_2 PF13646.6 ORF110173 - 1.8e-15 57.1 13.4 1.4e-05 25.4 0.4 5.1 3 2 2 5 5 5 5 HEAT repeats Cnd1 PF12717.7 ORF110173 - 2.8e-15 56.7 4.3 3.7e-05 23.8 0.5 3.9 2 1 2 4 4 4 3 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 ORF110173 - 4.2e-14 52.7 14.0 0.01 16.3 0.2 6.1 5 1 0 5 5 5 3 HEAT-like repeat Adaptin_N PF01602.20 ORF110173 - 5.7e-09 35.1 5.9 0.00037 19.2 2.5 3.2 2 1 1 3 3 3 2 Adaptin N terminal region DNA_alkylation PF08713.11 ORF110173 - 2.5e-07 30.6 1.2 0.36 10.5 0.0 4.3 2 1 2 4 4 4 2 DNA alkylation repair enzyme CLASP_N PF12348.8 ORF110173 - 1.1e-05 25.1 1.1 0.021 14.4 0.1 2.6 2 0 0 2 2 2 2 CLASP N terminal Proteasom_PSMB PF10508.9 ORF110173 - 1.2e-05 24.0 6.7 0.0013 17.3 1.2 3.4 1 1 1 3 3 3 1 Proteasome non-ATPase 26S subunit Vac14_Fab1_bd PF12755.7 ORF110173 - 0.00022 21.8 0.7 0.1 13.2 0.1 3.1 2 2 0 2 2 2 1 Vacuolar 14 Fab1-binding region V-ATPase_H_N PF03224.14 ORF110173 - 0.00034 20.0 1.5 0.031 13.6 0.1 3.0 2 1 1 3 3 3 1 V-ATPase subunit H V-ATPase_H_C PF11698.8 ORF110173 - 0.00065 19.8 1.9 0.73 10.0 0.1 3.8 3 1 1 4 4 4 1 V-ATPase subunit H Mo25 PF08569.11 ORF110173 - 0.001 18.5 1.2 0.14 11.5 0.2 3.0 1 1 1 3 3 3 1 Mo25-like CHASE6_C PF17150.4 ORF110173 - 0.0014 19.3 2.0 9.5 7.0 0.1 5.0 2 2 2 4 4 4 0 C-terminal domain of two-partite extracellular sensor domain Atx10homo_assoc PF09759.9 ORF110173 - 0.0072 16.3 1.0 0.89 9.6 0.6 3.2 2 1 1 3 3 3 1 Spinocerebellar ataxia type 10 protein domain Arm_2 PF04826.13 ORF110173 - 0.0074 15.8 1.6 8.6 5.7 0.1 4.0 1 1 4 5 5 5 1 Armadillo-like API5 PF05918.11 ORF110173 - 0.05 12.4 2.1 0.39 9.5 0.0 2.4 1 1 0 2 2 2 0 Apoptosis inhibitory protein 5 (API5) ApoC-I PF04691.12 ORF110173 - 0.11 12.5 1.6 14 5.7 0.0 3.9 5 0 0 5 5 4 0 Apolipoprotein C-I (ApoC-1) HEAT_UF PF18817.1 ORF110173 - 0.3 11.4 2.4 3.3 8.0 0.1 3.6 4 0 0 4 4 3 0 Repeat of uncharacterized protein PH0542 U3snoRNP10 PF12397.8 ORF110173 - 0.44 10.9 8.6 0.63 10.4 1.3 3.9 2 1 1 3 3 3 0 U3 small nucleolar RNA-associated protein 10 DWNN PF08783.11 ORF108445 - 0.18 12.1 1.8 0.77 10.1 1.8 2.2 1 0 0 1 1 1 0 DWNN domain DUF1759 PF03564.15 NODE_7578_length_1520_cov_56.575084_g5183_i1forward_frame_3 - 0.024 14.6 2.2 0.061 13.3 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) PKcGMP_CC PF16808.5 ORF99847 - 0.0056 16.5 1.9 0.0056 16.5 1.9 5.3 6 0 0 6 6 6 1 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_TATA_bd PF12325.8 ORF99847 - 0.13 12.4 34.0 0.035 14.3 2.5 4.3 1 1 3 4 4 4 0 TATA element modulatory factor 1 TATA binding DUF641 PF04859.12 ORF99847 - 5.8 7.3 32.8 8.5 6.7 9.0 4.7 1 1 3 4 4 4 0 Plant protein of unknown function (DUF641) Pro_dh PF01619.18 ORF90518 - 2.9e-58 197.7 0.2 4.1e-58 197.3 0.2 1.3 1 0 0 1 1 1 1 Proline dehydrogenase CSN8_PSD8_EIF3K PF10075.9 ORF90518 - 0.063 13.3 2.1 0.26 11.2 0.9 2.3 2 1 0 2 2 2 0 CSN8/PSMD8/EIF3K family SecA_SW PF07516.13 ORF8076 - 2.5e-53 181.1 0.2 2.5e-53 181.1 0.2 2.4 3 0 0 3 3 3 1 SecA Wing and Scaffold domain HMMR_N PF15905.5 ORF8076 - 0.047 13.2 7.5 0.15 11.6 0.5 2.4 2 0 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal FAM183 PF14886.6 ORF8076 - 0.047 14.4 2.4 1.4 9.7 0.1 2.5 2 0 0 2 2 2 0 FAM183A and FAM183B related MSL1_dimer PF16801.5 ORF8076 - 7.3 6.4 7.1 0.98 9.2 0.7 2.5 2 0 0 2 2 2 0 Dimerisation domain of Male-specific-Lethal 1 Ion_trans PF00520.31 ORF6249 - 2.4e-18 66.2 3.3 3.3e-18 65.8 3.3 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF6249 - 9.1e-10 38.4 0.8 2.1e-09 37.2 0.8 1.6 1 0 0 1 1 1 1 Ion channel Fer2 PF00111.27 ORF51385 - 0.0013 18.6 0.4 0.0029 17.5 0.4 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain PDZ_6 PF17820.1 ORF51385 - 0.0049 16.7 0.1 0.018 14.9 0.1 2.0 2 0 0 2 2 2 1 PDZ domain PDZ PF00595.24 ORF51385 - 0.14 12.6 0.0 0.32 11.4 0.0 1.6 1 0 0 1 1 1 0 PDZ domain Aldedh PF00171.22 ORF47390 - 1.5e-168 561.1 0.0 1.7e-168 560.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family YCII PF03795.14 ORF47390 - 0.057 13.8 0.0 0.16 12.4 0.0 1.7 1 1 0 1 1 1 0 YCII-related domain PP-binding PF00550.25 ORF46862 - 7.9e-20 71.0 1.1 1.6e-08 34.8 0.1 2.9 3 0 0 3 3 3 2 Phosphopantetheine attachment site Phage_holin_6_1 PF09682.10 ORF46862 - 0.061 13.7 0.4 23 5.5 0.1 2.9 2 0 0 2 2 2 0 Bacteriophage holin of superfamily 6 (Holin_LLH) TPH PF13868.6 ORF44533 - 0.018 13.5 112.6 0.0087 14.6 106.3 2.3 1 1 1 2 2 2 0 Trichohyalin-plectin-homology domain XdhC_C PF13478.6 ORF43119 - 9.3e-33 113.4 1.0 2.6e-31 108.7 0.1 2.7 3 0 0 3 3 3 1 XdhC Rossmann domain XdhC_CoxI PF02625.16 ORF43119 - 4e-09 36.5 1.5 2.1e-08 34.2 0.1 2.9 3 0 0 3 3 3 1 XdhC and CoxI family 2-Hacid_dh_C PF02826.19 ORF43119 - 6.4e-05 22.4 0.0 0.28 10.5 0.0 2.8 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 ORF43119 - 8.3e-05 22.5 0.3 0.47 10.3 0.0 2.4 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 ORF43119 - 0.0006 20.3 0.1 0.63 10.7 0.0 3.3 3 0 0 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent Biotin_lipoyl PF00364.22 ORF43119 - 0.015 15.1 0.1 0.035 13.9 0.1 1.7 1 0 0 1 1 1 0 Biotin-requiring enzyme Pyr_redox_2 PF07992.14 ORF43119 - 0.04 13.1 0.3 1.7 7.8 0.1 2.4 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Biotin_lipoyl_2 PF13533.6 ORF43119 - 0.041 13.7 0.0 0.1 12.4 0.0 1.7 1 0 0 1 1 1 0 Biotin-lipoyl like Peptidase_M23 PF01551.22 ORF43119 - 0.11 12.7 0.1 0.28 11.4 0.1 1.6 1 0 0 1 1 1 0 Peptidase family M23 Oxysterol_BP PF01237.18 ORF41331 - 0.05 12.4 0.0 2.2 7.0 0.0 2.1 2 0 0 2 2 2 0 Oxysterol-binding protein TPR_12 PF13424.6 ORF37756 - 1.7e-18 66.7 28.5 3.3e-08 33.7 1.4 5.1 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF37756 - 5.8e-12 44.8 20.9 0.084 13.0 0.2 7.9 7 1 1 8 8 8 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF37756 - 4.5e-11 42.7 24.1 0.00026 20.5 6.3 3.1 1 1 2 3 3 3 3 MalT-like TPR region TPR_8 PF13181.6 ORF37756 - 0.0003 20.8 13.5 0.75 10.2 0.1 6.9 6 1 1 7 7 7 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF37756 - 0.00039 20.2 23.0 0.029 14.2 0.2 7.1 6 1 2 8 8 8 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF37756 - 0.0004 20.1 19.2 2.6 8.0 0.1 7.5 7 1 1 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF37756 - 0.02 15.5 23.0 0.094 13.4 0.2 5.6 4 2 3 7 7 7 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF37756 - 0.066 13.3 14.6 0.35 10.9 1.2 4.0 5 1 0 6 6 6 0 Anaphase-promoting complex subunit 5 TPR_14 PF13428.6 ORF37756 - 0.075 13.9 30.4 20 6.3 0.3 8.1 6 2 2 8 8 8 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF37756 - 0.12 12.5 7.4 2.2 8.5 0.0 5.5 5 3 0 5 5 5 0 Tetratricopeptide repeat PMAIP1 PF15150.6 ORF37756 - 0.13 12.2 0.4 1.1 9.2 0.1 2.6 2 0 0 2 2 2 0 Phorbol-12-myristate-13-acetate-induced TPR_19 PF14559.6 ORF37756 - 0.26 11.8 22.6 0.11 13.0 1.4 4.8 3 1 0 5 5 5 0 Tetratricopeptide repeat PTS_IIA PF02255.16 ORF37756 - 0.27 11.3 0.2 0.27 11.3 0.2 4.0 3 1 0 4 4 4 0 PTS system, Lactose/Cellobiose specific IIA subunit TPR_6 PF13174.6 ORF37756 - 0.85 10.4 18.9 23 5.9 0.1 7.0 6 1 1 7 7 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF37756 - 2.9 8.8 0.0 2.9 8.8 0.0 7.1 7 0 0 7 7 6 0 Tetratricopeptide repeat Sacchrp_dh_NADP PF03435.18 ORF36066 - 4.4e-10 39.9 0.0 8e-10 39.1 0.0 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NmrA PF05368.13 ORF36066 - 0.1 12.1 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family Aldedh PF00171.22 ORF23329 - 2.3e-181 603.4 0.1 2.6e-181 603.2 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family TPR_12 PF13424.6 ORF19737 - 1.7e-18 66.7 28.5 3.3e-08 33.7 1.4 5.1 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF19737 - 5.8e-12 44.8 20.9 0.084 13.0 0.2 7.9 7 1 1 8 8 8 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF19737 - 4.5e-11 42.7 24.1 0.00026 20.5 6.3 3.1 1 1 2 3 3 3 3 MalT-like TPR region TPR_8 PF13181.6 ORF19737 - 0.0003 20.8 13.5 0.75 10.2 0.1 6.9 6 1 1 7 7 7 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF19737 - 0.00039 20.2 23.0 0.029 14.2 0.2 7.1 6 1 2 8 8 8 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF19737 - 0.0004 20.1 19.2 2.6 8.0 0.1 7.5 7 1 1 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF19737 - 0.02 15.5 23.0 0.094 13.4 0.2 5.6 4 2 3 7 7 7 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF19737 - 0.066 13.3 14.6 0.35 10.9 1.2 4.0 5 1 0 6 6 6 0 Anaphase-promoting complex subunit 5 TPR_14 PF13428.6 ORF19737 - 0.075 13.9 30.4 20 6.3 0.3 8.1 6 2 2 8 8 8 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF19737 - 0.12 12.5 7.4 2.2 8.5 0.0 5.5 5 3 0 5 5 5 0 Tetratricopeptide repeat PMAIP1 PF15150.6 ORF19737 - 0.13 12.2 0.4 1.1 9.2 0.1 2.6 2 0 0 2 2 2 0 Phorbol-12-myristate-13-acetate-induced TPR_19 PF14559.6 ORF19737 - 0.26 11.8 22.6 0.11 13.0 1.4 4.8 3 1 0 5 5 5 0 Tetratricopeptide repeat PTS_IIA PF02255.16 ORF19737 - 0.27 11.3 0.2 0.27 11.3 0.2 4.0 3 1 0 4 4 4 0 PTS system, Lactose/Cellobiose specific IIA subunit TPR_6 PF13174.6 ORF19737 - 0.85 10.4 18.9 23 5.9 0.1 7.0 6 1 1 7 7 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF19737 - 2.9 8.8 0.0 2.9 8.8 0.0 7.1 7 0 0 7 7 6 0 Tetratricopeptide repeat WWE PF02825.20 ORF111357 - 0.00028 21.4 0.1 0.00068 20.2 0.1 1.7 1 0 0 1 1 1 1 WWE domain TPR_12 PF13424.6 ORF106379 - 1.7e-18 66.7 28.5 3.3e-08 33.7 1.4 5.1 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF106379 - 5.8e-12 44.8 20.9 0.084 13.0 0.2 7.9 7 1 1 8 8 8 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF106379 - 4.5e-11 42.7 24.1 0.00026 20.5 6.3 3.1 1 1 2 3 3 3 3 MalT-like TPR region TPR_8 PF13181.6 ORF106379 - 0.0003 20.8 13.5 0.75 10.2 0.1 6.9 6 1 1 7 7 7 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF106379 - 0.00039 20.2 23.0 0.029 14.2 0.2 7.1 6 1 2 8 8 8 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF106379 - 0.0004 20.1 19.2 2.6 8.0 0.1 7.5 7 1 1 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF106379 - 0.02 15.5 23.0 0.094 13.4 0.2 5.6 4 2 3 7 7 7 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF106379 - 0.066 13.3 14.6 0.35 10.9 1.2 4.0 5 1 0 6 6 6 0 Anaphase-promoting complex subunit 5 TPR_14 PF13428.6 ORF106379 - 0.075 13.9 30.4 20 6.3 0.3 8.1 6 2 2 8 8 8 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF106379 - 0.12 12.5 7.4 2.2 8.5 0.0 5.5 5 3 0 5 5 5 0 Tetratricopeptide repeat PMAIP1 PF15150.6 ORF106379 - 0.13 12.2 0.4 1.1 9.2 0.1 2.6 2 0 0 2 2 2 0 Phorbol-12-myristate-13-acetate-induced TPR_19 PF14559.6 ORF106379 - 0.26 11.8 22.6 0.11 13.0 1.4 4.8 3 1 0 5 5 5 0 Tetratricopeptide repeat PTS_IIA PF02255.16 ORF106379 - 0.27 11.3 0.2 0.27 11.3 0.2 4.0 3 1 0 4 4 4 0 PTS system, Lactose/Cellobiose specific IIA subunit TPR_6 PF13174.6 ORF106379 - 0.85 10.4 18.9 23 5.9 0.1 7.0 6 1 1 7 7 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF106379 - 2.9 8.8 0.0 2.9 8.8 0.0 7.1 7 0 0 7 7 6 0 Tetratricopeptide repeat DUF1759 PF03564.15 NODE_7646_length_1515_cov_56.099324_g5183_i2forward_frame_1 - 0.023 14.6 2.1 0.056 13.4 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) AA_permease_2 PF13520.6 ORF88704 - 4.9e-28 98.1 59.9 6.9e-28 97.6 59.9 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF88704 - 2.4e-10 39.6 52.7 9.2e-10 37.7 52.6 1.8 1 1 0 1 1 1 1 Amino acid permease Tubulin PF00091.25 ORF88704 - 0.097 12.8 0.1 0.14 12.4 0.1 1.2 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain Ank_2 PF12796.7 ORF77116 - 8.1e-24 84.0 0.1 9.4e-12 45.4 0.0 3.4 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF77116 - 9.2e-22 77.1 0.4 4.6e-11 43.0 0.0 4.4 3 1 2 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF77116 - 1.2e-20 72.9 0.7 5.7e-07 29.7 0.1 5.3 5 0 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF77116 - 5.4e-19 66.3 0.2 6.8e-06 26.1 0.0 5.3 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 ORF77116 - 3.4e-15 55.9 1.6 2.7e-07 30.7 0.0 4.9 3 1 2 5 5 5 3 Ankyrin repeats (many copies) TPR_2 PF07719.17 ORF71692 - 4e-23 79.6 17.1 0.00054 19.9 0.0 8.8 9 0 0 9 9 9 5 Tetratricopeptide repeat TPR_1 PF00515.28 ORF71692 - 5.4e-21 73.5 21.5 4.6e-05 23.0 0.1 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.6 ORF71692 - 4.6e-16 57.6 29.2 0.00035 20.6 0.0 9.9 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_12 PF13424.6 ORF71692 - 4.2e-15 55.8 6.6 0.00087 19.5 0.1 6.5 4 2 2 6 6 6 5 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF71692 - 8.1e-12 45.2 11.5 1.7e-05 25.0 1.6 4.4 4 0 0 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 ORF71692 - 1.1e-10 41.9 0.5 0.00019 21.8 0.0 4.8 5 1 1 6 6 4 3 Tetratricopeptide repeat TPR_6 PF13174.6 ORF71692 - 1.5e-10 41.0 3.6 0.041 14.5 0.0 7.2 8 0 0 8 8 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF71692 - 2.2e-10 40.4 0.0 0.042 14.7 0.0 6.4 3 1 5 8 8 6 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF71692 - 3.4e-08 33.0 8.3 0.42 10.8 0.0 7.2 7 1 0 7 7 7 3 Tetratricopeptide repeat TPR_11 PF13414.6 ORF71692 - 6.2e-07 29.0 8.4 0.015 14.9 0.1 6.0 5 2 2 7 7 7 2 TPR repeat TPR_16 PF13432.6 ORF71692 - 6.2e-06 26.8 0.0 0.74 10.5 0.0 4.5 3 1 2 5 5 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF71692 - 1.2e-05 25.4 6.9 0.32 11.5 0.2 6.5 9 1 0 9 9 6 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF71692 - 6.1e-05 23.1 0.0 0.066 13.4 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat Sel1 PF08238.12 ORF71692 - 0.005 17.5 3.9 3.9 8.3 0.0 5.4 5 0 0 5 5 4 1 Sel1 repeat TPR_15 PF13429.6 ORF71692 - 0.016 14.4 0.1 0.052 12.7 0.1 1.9 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF71692 - 0.032 14.1 9.4 2 8.4 0.0 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat DUF5112 PF17139.4 ORF71692 - 0.12 11.8 16.0 2.5 7.5 4.4 3.9 2 1 2 4 4 4 0 Domain of unknown function (DUF5112) PPR PF01535.20 ORF71692 - 0.14 12.4 10.1 26 5.4 0.1 5.4 6 0 0 6 6 5 0 PPR repeat 23S_rRNA_IVP PF05635.11 ORF71692 - 0.17 12.2 3.3 2 8.8 0.4 3.3 3 0 0 3 3 2 0 23S rRNA-intervening sequence protein TPR_3 PF07720.12 ORF71692 - 1.3 9.1 11.0 12 6.1 0.0 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat CRM1_C PF08767.11 ORF66933 - 1.5e-101 339.7 0.6 2.2e-101 339.2 0.6 1.2 1 0 0 1 1 1 1 CRM1 C terminal GAF PF01590.26 ORF54333 - 1.4e-24 87.2 0.1 2e-16 60.8 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 ORF54333 - 6.2e-21 75.1 0.0 9.9e-14 51.8 0.0 2.8 2 1 0 2 2 2 2 GAF domain GAF_3 PF13492.6 ORF54333 - 3e-15 56.7 0.0 3.7e-09 37.0 0.0 2.9 3 0 0 3 3 3 2 GAF domain C2 PF00168.30 ORF54333 - 1.1e-07 32.1 0.0 9.5e-07 29.1 0.0 2.5 2 1 0 2 2 2 1 C2 domain SpoVT_C PF15714.5 ORF54333 - 0.0043 17.1 0.1 0.13 12.3 0.0 2.5 2 0 0 2 2 2 1 Stage V sporulation protein T C-terminal, transcription factor TPR_2 PF07719.17 ORF29137 - 4e-23 79.6 17.1 0.00054 19.9 0.0 8.8 9 0 0 9 9 9 5 Tetratricopeptide repeat TPR_1 PF00515.28 ORF29137 - 5.4e-21 73.5 21.5 4.6e-05 23.0 0.1 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.6 ORF29137 - 4.6e-16 57.6 29.2 0.00035 20.6 0.0 9.9 10 0 0 10 10 10 4 Tetratricopeptide repeat TPR_12 PF13424.6 ORF29137 - 4.2e-15 55.8 6.6 0.00087 19.5 0.1 6.5 4 2 2 6 6 6 5 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF29137 - 8.1e-12 45.2 11.5 1.7e-05 25.0 1.6 4.4 4 0 0 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 ORF29137 - 1.1e-10 41.9 0.5 0.00019 21.8 0.0 4.8 5 1 1 6 6 4 3 Tetratricopeptide repeat TPR_6 PF13174.6 ORF29137 - 1.5e-10 41.0 3.6 0.041 14.5 0.0 7.2 8 0 0 8 8 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF29137 - 2.2e-10 40.4 0.0 0.042 14.7 0.0 6.4 3 1 5 8 8 6 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF29137 - 3.4e-08 33.0 8.3 0.42 10.8 0.0 7.2 7 1 0 7 7 7 3 Tetratricopeptide repeat TPR_11 PF13414.6 ORF29137 - 6.2e-07 29.0 8.4 0.015 14.9 0.1 6.0 5 2 2 7 7 7 2 TPR repeat TPR_16 PF13432.6 ORF29137 - 6.2e-06 26.8 0.0 0.74 10.5 0.0 4.5 3 1 2 5 5 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF29137 - 1.2e-05 25.4 6.9 0.32 11.5 0.2 6.5 9 1 0 9 9 6 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF29137 - 6.1e-05 23.1 0.0 0.066 13.4 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat Sel1 PF08238.12 ORF29137 - 0.005 17.5 3.9 3.9 8.3 0.0 5.4 5 0 0 5 5 4 1 Sel1 repeat TPR_15 PF13429.6 ORF29137 - 0.016 14.4 0.1 0.052 12.7 0.1 1.9 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF29137 - 0.032 14.1 9.4 2 8.4 0.0 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat DUF5112 PF17139.4 ORF29137 - 0.12 11.8 16.0 2.5 7.5 4.4 3.9 2 1 2 4 4 4 0 Domain of unknown function (DUF5112) PPR PF01535.20 ORF29137 - 0.14 12.4 10.1 26 5.4 0.1 5.4 6 0 0 6 6 5 0 PPR repeat 23S_rRNA_IVP PF05635.11 ORF29137 - 0.17 12.2 3.3 2 8.8 0.4 3.3 3 0 0 3 3 2 0 23S rRNA-intervening sequence protein TPR_3 PF07720.12 ORF29137 - 1.3 9.1 11.0 12 6.1 0.0 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat BCS1_N PF08740.11 ORF2089 - 0.0041 17.1 0.0 0.0071 16.3 0.0 1.3 1 0 0 1 1 1 1 BCS1 N terminal Pkinase PF00069.25 ORF19932 - 3.9e-27 95.3 0.0 5.2e-27 94.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF19932 - 5.8e-13 48.7 0.0 7.3e-13 48.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase FHA PF00498.26 ORF19932 - 1.2e-12 48.0 0.0 1.2e-11 44.8 0.0 2.5 3 0 0 3 3 3 1 FHA domain Pkinase_fungal PF17667.1 ORF19932 - 9.8e-12 44.3 0.0 1.5e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF19932 - 0.00035 20.0 0.0 0.00056 19.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF19932 - 0.00081 19.4 0.0 0.0034 17.3 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family Yop-YscD_cpl PF16697.5 ORF19932 - 0.0014 18.9 0.0 0.0036 17.6 0.0 1.6 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Choline_kinase PF01633.20 ORF19932 - 0.14 11.7 0.0 0.24 10.9 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Pkinase PF00069.25 ORF18355 - 3.9e-27 95.3 0.0 5.2e-27 94.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18355 - 5.8e-13 48.7 0.0 7.3e-13 48.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase FHA PF00498.26 ORF18355 - 1.2e-12 48.0 0.0 1.2e-11 44.8 0.0 2.5 3 0 0 3 3 3 1 FHA domain Pkinase_fungal PF17667.1 ORF18355 - 9.8e-12 44.3 0.0 1.5e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF18355 - 0.00035 20.0 0.0 0.00056 19.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF18355 - 0.00081 19.4 0.0 0.0034 17.3 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family Yop-YscD_cpl PF16697.5 ORF18355 - 0.0014 18.9 0.0 0.0036 17.6 0.0 1.6 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Choline_kinase PF01633.20 ORF18355 - 0.14 11.7 0.0 0.24 10.9 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Peptidase_M41 PF01434.18 ORF90688 - 6.6e-74 247.9 0.2 1e-73 247.3 0.2 1.3 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 ORF90688 - 1.5e-46 158.1 0.0 4.5e-46 156.5 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF90688 - 1.2e-11 44.2 0.1 2.4e-11 43.2 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 ORF90688 - 1.8e-06 28.0 0.0 1e-05 25.5 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 ORF90688 - 1.2e-05 24.7 0.0 2.1e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain RuvB_N PF05496.12 ORF90688 - 0.00013 21.7 0.0 0.0006 19.6 0.0 2.1 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 ORF90688 - 0.00033 21.1 1.4 0.019 15.4 0.1 3.1 3 1 1 4 4 3 1 AAA ATPase domain CSTF2_hinge PF14327.6 ORF90688 - 0.001 19.4 0.2 0.0021 18.5 0.2 1.5 1 0 0 1 1 1 1 Hinge domain of cleavage stimulation factor subunit 2 AAA_33 PF13671.6 ORF90688 - 0.0013 18.9 0.0 0.0034 17.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF90688 - 0.0019 17.9 0.0 0.0065 16.2 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein ParB_C PF18064.1 ORF90688 - 0.0021 18.2 0.3 2.9 8.1 0.1 2.7 2 0 0 2 2 2 2 Centromere-binding protein ParB C-terminal AAA_2 PF07724.14 ORF90688 - 0.0036 17.5 0.1 0.012 15.7 0.0 2.0 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 ORF90688 - 0.0036 16.7 0.8 0.007 15.8 0.2 1.7 2 0 0 2 2 1 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 ORF90688 - 0.0037 17.5 0.5 0.15 12.3 0.1 2.8 2 1 1 3 3 3 1 AAA domain ABC_tran PF00005.27 ORF90688 - 0.014 15.9 0.9 0.17 12.4 0.1 2.6 3 0 0 3 3 3 0 ABC transporter Sigma54_activat PF00158.26 ORF90688 - 0.036 13.8 0.0 0.2 11.3 0.0 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 ORF90688 - 0.04 13.2 0.1 0.087 12.1 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_7 PF12775.7 ORF90688 - 0.056 12.9 0.3 0.17 11.4 0.3 1.8 1 1 0 1 1 1 0 P-loop containing dynein motor region PhoH PF02562.16 ORF90688 - 0.075 12.5 0.3 0.18 11.2 0.3 1.6 1 0 0 1 1 1 0 PhoH-like protein Sigma54_activ_2 PF14532.6 ORF90688 - 0.079 13.1 0.0 0.24 11.5 0.0 1.8 2 0 0 2 2 1 0 Sigma-54 interaction domain AAA_17 PF13207.6 ORF90688 - 0.098 13.1 0.4 0.26 11.7 0.1 2.0 2 0 0 2 2 1 0 AAA domain AAA_14 PF13173.6 ORF90688 - 0.11 12.5 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF90688 - 0.11 12.7 0.0 0.27 11.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_PrkA PF08298.11 ORF90688 - 0.11 11.3 0.0 0.19 10.6 0.0 1.3 1 0 0 1 1 1 0 PrkA AAA domain AAA_24 PF13479.6 ORF90688 - 0.12 12.1 0.0 0.3 10.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF90688 - 0.19 11.7 0.0 0.41 10.7 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 ORF90688 - 0.21 11.5 0.1 0.53 10.2 0.1 1.6 1 0 0 1 1 1 0 NACHT domain Ion_trans PF00520.31 ORF90071 - 1.7e-11 43.9 8.9 2.8e-11 43.1 8.9 1.3 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 ORF90071 - 0.38 10.6 3.5 0.82 9.5 3.5 1.7 1 1 0 1 1 1 0 Ligand-gated ion channel BTB PF00651.31 ORF82761 - 2.8e-19 69.4 2.7 2.6e-18 66.3 0.1 2.5 1 1 1 2 2 2 1 BTB/POZ domain CENP-Q PF13094.6 ORF82761 - 0.022 15.0 2.7 0.038 14.2 2.7 1.3 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit MRC1 PF09444.10 ORF82761 - 0.029 14.9 2.7 0.052 14.0 2.7 1.3 1 0 0 1 1 1 0 MRC1-like domain Sld5 PF05916.11 ORF82761 - 0.1 13.0 1.9 0.42 11.1 1.0 2.1 2 0 0 2 2 2 0 GINS complex protein BACK PF07707.15 ORF82761 - 0.84 9.8 0.0 0.84 9.8 0.0 3.0 4 0 0 4 4 4 0 BTB And C-terminal Kelch TPR_10 PF13374.6 ORF58167 - 7e-67 219.7 32.3 5.5e-12 45.2 0.5 8.1 7 1 0 7 7 7 7 Tetratricopeptide repeat TPR_12 PF13424.6 ORF58167 - 1.4e-62 207.9 50.5 1.3e-17 63.8 4.1 6.3 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF58167 - 9.7e-12 44.9 4.7 3.5e-08 33.2 0.7 2.4 1 1 1 2 2 2 2 MalT-like TPR region TPR_7 PF13176.6 ORF58167 - 3.6e-11 42.3 19.1 0.077 13.1 0.4 6.2 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF58167 - 9.7e-11 41.0 15.7 0.072 12.9 0.5 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF58167 - 2.2e-09 37.8 18.9 0.0011 19.5 3.8 5.6 3 2 1 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF58167 - 1e-06 28.3 23.8 0.16 12.2 0.9 6.7 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF58167 - 9.1e-06 26.1 23.0 0.19 12.6 0.5 6.5 4 2 3 7 7 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF58167 - 9.2e-06 25.5 15.1 0.03 14.5 0.1 6.4 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF58167 - 2.4e-05 24.4 15.4 0.3 11.6 0.1 6.6 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF58167 - 2.6e-05 24.4 25.4 0.038 14.6 0.1 6.9 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF58167 - 0.00082 19.8 17.9 0.028 14.9 0.8 4.6 2 1 2 5 5 5 2 Tetratricopeptide repeat TPR_3 PF07720.12 ORF58167 - 0.002 18.1 0.0 0.59 10.2 0.0 3.2 2 0 0 2 2 2 1 Tetratricopeptide repeat PPR PF01535.20 ORF58167 - 0.025 14.8 0.5 89 3.7 0.0 4.3 4 0 0 4 4 4 0 PPR repeat TPR_5 PF12688.7 ORF58167 - 0.035 14.3 7.9 8 6.7 0.0 4.3 3 1 0 4 4 4 0 Tetratrico peptide repeat DUF1571 PF07608.11 ORF58167 - 0.066 12.6 0.0 5 6.5 0.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1571) Osmo_CC PF08946.10 ORF58167 - 0.084 13.1 0.3 1.3e+02 3.0 0.0 4.2 4 0 0 4 4 4 0 Osmosensory transporter coiled coil PALP PF00291.25 ORF54756 - 1.6e-65 221.4 0.0 2.1e-65 221.0 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CBS PF00571.28 ORF54756 - 5.9e-08 33.0 0.6 8.5e-06 26.1 0.1 3.1 2 0 0 2 2 2 2 CBS domain Ank_2 PF12796.7 ORF86867 - 5.5e-110 360.2 22.1 1.2e-17 64.3 0.1 7.0 1 1 6 8 8 8 8 Ankyrin repeats (3 copies) Ank PF00023.30 ORF86867 - 1.1e-83 272.3 27.2 8.4e-06 26.0 0.0 15.1 15 0 0 15 15 15 15 Ankyrin repeat Ank_5 PF13857.6 ORF86867 - 4.3e-72 237.2 22.5 2.1e-08 34.3 0.1 14.0 1 1 14 15 15 15 15 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF86867 - 2e-64 213.2 22.2 4e-08 33.7 0.0 9.9 2 2 9 12 12 12 12 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF86867 - 6.1e-58 186.0 7.9 0.00076 19.7 0.0 15.0 15 0 0 15 15 15 13 Ankyrin repeat YlzJ PF14035.6 ORF86867 - 0.0016 18.6 0.0 28 5.0 0.0 5.3 7 0 0 7 7 7 0 YlzJ-like protein VWA_3_C PF18571.1 ORF86867 - 0.015 15.2 9.2 44 4.1 0.0 6.6 7 0 0 7 7 7 0 von Willebrand factor type A C-terminal domain BNIP3 PF06553.12 ORF86867 - 0.12 12.0 3.5 3.2 7.4 0.2 4.2 3 2 1 4 4 4 0 BNIP3 Bd3614_N PF14442.6 ORF86867 - 0.58 10.5 6.6 41 4.6 0.1 4.8 3 2 2 5 5 5 0 Bd3614-like deaminase N-terminal Nse4-Nse3_bdg PF15412.6 ORF86867 - 0.8 9.9 13.4 15 5.8 0.0 6.6 8 0 0 8 8 8 0 Binding domain of Nse4/EID3 to Nse3-MAGE DUF4175 PF13779.6 ORF54166 - 0.27 9.1 7.1 0.43 8.4 7.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) GTP_EFTU PF00009.27 ORF4953 - 4.2e-39 134.1 1.4 2.7e-38 131.5 0.0 2.1 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF4953 - 0.00053 20.1 0.0 0.0042 17.1 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase Baculo_PEP_C PF04513.12 ORF37519 - 1.3e-07 31.7 25.5 0.00056 20.0 8.9 3.0 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus Vip3A_N PF12495.8 ORF37519 - 0.022 14.7 17.4 0.65 9.9 2.7 3.1 1 1 1 2 2 2 0 Vegetative insecticide protein 3A N terminal CdvA PF18822.1 ORF37519 - 0.063 13.1 30.5 0.17 11.7 2.5 4.8 1 1 5 6 6 6 0 CdvA-like coiled-coil domain Apolipoprotein PF01442.18 ORF37519 - 0.43 10.4 31.6 0.25 11.2 24.2 2.6 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain DUF1759 PF03564.15 ORF37519 - 0.65 9.9 13.1 3.9 7.4 1.1 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1759) DUF1729 PF08354.10 ORF37519 - 0.82 8.5 7.1 0.81 8.5 4.3 2.3 1 1 1 3 3 3 0 Domain of unknown function (DUF1729) YfkD PF14167.6 ORF37519 - 1.1 8.4 8.7 0.46 9.6 0.9 2.5 1 1 1 2 2 2 0 YfkD-like protein DUF1664 PF07889.12 ORF37519 - 1.2 9.2 30.6 1.4 9.0 5.4 4.0 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) Gp-FAR-1 PF05823.12 ORF37519 - 2 8.7 17.9 1.2 9.5 5.4 2.7 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Caldesmon PF02029.15 ORF37519 - 3.4 6.3 23.5 21 3.7 23.5 2.0 1 1 0 1 1 1 0 Caldesmon SPX PF03105.19 ORF37519 - 5.5 6.8 15.1 7.5 6.3 0.1 2.3 2 0 0 2 2 2 0 SPX domain Baculo_p24 PF05073.12 ORF37519 - 7.1 6.4 22.2 8.1 6.2 7.6 2.4 1 1 1 2 2 2 0 Baculovirus P24 capsid protein DUF4600 PF15372.6 ORF37519 - 7.7 7.0 22.6 13 6.2 5.4 3.7 2 1 2 4 4 4 0 Domain of unknown function (DUF4600) DUF4177 PF13783.6 ORF35019 - 0.25 11.7 0.6 47 4.4 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4177) RCC1 PF00415.18 ORF26557 - 2.1e-16 60.2 22.0 0.0016 19.0 0.2 7.9 9 0 0 9 9 9 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF26557 - 1.3e-09 37.6 23.9 2.4e-07 30.4 1.9 6.4 6 0 0 6 6 6 3 Regulator of chromosome condensation (RCC1) repeat DUF2968 PF11180.8 ORF15471 - 0.0031 17.2 0.5 0.0031 17.2 0.5 6.0 2 2 4 6 6 6 1 Protein of unknown function (DUF2968) End3 PF12761.7 ORF15471 - 0.016 15.4 24.3 0.016 15.4 24.3 4.9 1 1 3 4 4 4 0 Actin cytoskeleton-regulatory complex protein END3 TolA_bind_tri PF16331.5 ORF15471 - 0.032 14.3 1.1 0.032 14.3 1.1 7.2 3 3 3 6 6 6 0 TolA binding protein trimerisation Fe-S_assembly PF04384.13 ORF15471 - 0.11 13.1 5.7 10 6.8 0.8 3.8 2 0 0 2 2 2 0 Iron-sulphur cluster assembly APG6_N PF17675.1 ORF15471 - 0.3 11.6 117.3 1.5 9.4 24.7 6.2 1 1 4 5 5 5 0 Apg6 coiled-coil region ATG16 PF08614.11 ORF15471 - 4.4 7.5 97.9 0.073 13.3 6.0 5.9 1 1 2 5 5 5 0 Autophagy protein 16 (ATG16) PAN_4 PF14295.6 ORF15251 - 0.00017 21.5 2.8 0.23 11.4 0.1 3.0 2 0 0 2 2 2 2 PAN domain PAN_2 PF08276.11 ORF15251 - 0.022 14.9 2.7 0.9 9.7 0.4 2.7 2 0 0 2 2 2 0 PAN-like domain DUF963 PF06131.11 ORF73812 - 1.3e-08 34.1 75.5 0.0028 17.0 7.0 9.0 3 2 2 8 8 8 6 Schizosaccharomyces pombe repeat of unknown function (DUF963) AAA_16 PF13191.6 ORF58070 - 4.3e-05 24.0 0.0 0.00014 22.2 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 ORF58070 - 0.00027 21.0 0.0 0.00051 20.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 ORF58070 - 0.00037 20.8 0.0 0.00072 19.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 ORF58070 - 0.0022 17.9 0.0 0.0035 17.3 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_28 PF13521.6 ORF58070 - 0.013 15.8 0.0 0.027 14.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 ORF58070 - 0.013 15.6 0.0 0.027 14.6 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_18 PF13238.6 ORF58070 - 0.014 16.0 0.0 0.028 14.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 ORF58070 - 0.014 14.7 0.0 0.023 14.1 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 ORF58070 - 0.019 14.7 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.22 ORF58070 - 0.024 15.0 0.0 0.042 14.2 0.0 1.3 1 0 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 ORF58070 - 0.025 13.7 0.0 0.045 12.9 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF58070 - 0.038 13.7 0.0 0.098 12.4 0.0 1.6 2 0 0 2 2 1 0 P-loop containing region of AAA domain AAA_33 PF13671.6 ORF58070 - 0.042 14.0 0.1 0.11 12.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF58070 - 0.045 13.7 0.0 0.069 13.0 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 ORF58070 - 0.056 13.4 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 ORF58070 - 0.075 13.5 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 ORF58070 - 0.076 13.5 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA PF00004.29 ORF58070 - 0.13 12.7 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Glyco_hydro_38C PF07748.13 ORF44681 - 3.9e-26 92.4 0.2 7.1e-26 91.6 0.2 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain HMG_box PF00505.19 ORF41505 - 1.2e-27 96.1 28.1 4.2e-15 55.9 3.4 3.5 3 0 0 3 3 3 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF41505 - 3.8e-18 65.9 16.6 1.2e-10 41.8 6.5 5.0 4 0 0 4 4 4 2 HMG-box domain SSF PF00474.17 ORF29551 - 4.3e-148 493.5 29.8 6.7e-148 492.9 29.8 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family 4HB_MCP_1 PF12729.7 ORF29551 - 0.18 11.3 0.1 0.18 11.3 0.1 2.2 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction tRNA-synt_2d PF01409.20 ORF19038 - 2.9e-87 292.2 0.4 1.2e-86 290.2 0.1 1.9 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 ORF19038 - 1.9e-05 23.9 0.7 0.0015 17.7 0.0 3.0 3 1 0 3 3 3 1 tRNA synthetases class II (D, K and N) tRNA_synthFbeta PF17759.1 ORF19038 - 5e-05 22.9 0.0 0.0052 16.2 0.0 2.5 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain PheRS_DBD3 PF18553.1 ORF19038 - 0.039 14.2 0.8 0.23 11.8 0.9 2.3 2 0 0 2 2 2 0 PheRS DNA binding domain 3 tRNA-synt_2b PF00587.25 ORF19038 - 0.046 13.7 0.0 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetase class II core domain (G, H, P, S and T) Gln-synt_C-ter PF18318.1 ORF19038 - 0.053 13.4 0.4 0.24 11.2 0.1 2.1 2 0 0 2 2 2 0 Glutamine synthetase C-terminal domain cNMP_binding PF00027.29 ORF14148 - 4.3e-07 29.9 0.0 1.5e-06 28.2 0.0 2.0 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain Sulfate_transp PF00916.20 ORF14148 - 2.3e-06 26.6 0.1 3.4e-06 26.0 0.1 1.2 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 ORF14148 - 7.9e-05 22.3 0.0 0.00015 21.4 0.0 1.3 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 ORF14148 - 0.00087 19.6 0.5 0.0017 18.7 0.5 1.5 1 0 0 1 1 1 1 STAS domain PPR_2 PF13041.6 ORF11841 - 1.8e-66 220.1 17.0 3.2e-16 59.3 1.6 9.3 6 3 5 11 11 10 8 PPR repeat family PPR PF01535.20 ORF11841 - 3.4e-50 164.8 9.8 3.4e-09 36.3 0.0 10.8 11 0 0 11 11 11 6 PPR repeat PPR_1 PF12854.7 ORF11841 - 2.1e-48 161.7 1.7 2.6e-13 49.4 0.0 9.7 10 0 0 10 10 10 6 PPR repeat PPR_3 PF13812.6 ORF11841 - 9.6e-46 153.7 4.5 4.6e-09 36.2 0.0 7.0 5 2 2 7 7 7 5 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF11841 - 1.2e-27 96.6 0.8 8.8e-11 41.6 0.1 4.2 2 1 2 4 4 4 4 Pentacotripeptide-repeat region of PRORP ATP13 PF12921.7 ORF11841 - 3.5e-07 30.1 0.1 0.6 10.0 0.0 5.1 1 1 3 5 5 5 3 Mitochondrial ATPase expression ANAPC3 PF12895.7 ORF11841 - 4.3e-05 23.7 0.1 0.13 12.5 0.1 3.0 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF11841 - 8.8e-05 23.0 0.7 3.6 8.6 0.0 5.5 4 1 2 6 6 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF11841 - 9.9e-05 22.8 0.5 0.94 10.0 0.0 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat MRP-S27 PF10037.9 ORF11841 - 0.0047 15.8 0.6 0.26 10.1 0.1 3.0 1 1 2 3 3 3 2 Mitochondrial 28S ribosomal protein S27 TPR_7 PF13176.6 ORF11841 - 0.019 14.9 0.1 0.9 9.7 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF11841 - 0.035 14.2 0.9 7.9 6.9 0.1 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat pEK499_p136 PF18736.1 ORF11841 - 0.036 13.7 0.1 0.15 11.7 0.1 2.0 2 0 0 2 2 2 0 HEPN pEK499 p136 BTAD PF03704.17 ORF11841 - 0.044 14.2 0.4 0.45 10.9 0.0 2.9 4 0 0 4 4 3 0 Bacterial transcriptional activator domain Vps23_core PF09454.10 ORF11841 - 0.063 13.2 0.5 32 4.6 0.1 3.3 3 0 0 3 3 3 0 Vps23 core domain Death_2 PF14786.6 ORF11841 - 0.11 12.4 0.0 0.28 11.1 0.0 1.6 1 0 0 1 1 1 0 Tube Death domain TPR_1 PF00515.28 ORF109811 - 6.3e-19 66.9 0.2 1.1e-08 34.5 0.0 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF109811 - 8.1e-19 66.2 0.4 1.5e-06 27.9 0.0 4.7 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF109811 - 2.8e-09 36.4 0.2 0.0027 17.8 0.0 4.4 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF109811 - 9.3e-09 35.5 0.2 4.6e-08 33.2 0.0 2.4 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF109811 - 8.3e-08 32.8 0.0 9.9e-05 22.9 0.0 3.4 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF109811 - 3.4e-06 27.1 0.0 0.16 12.4 0.0 3.0 3 0 0 3 3 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF109811 - 3.4e-06 27.3 0.0 0.61 10.9 0.0 4.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF109811 - 4e-06 27.2 0.1 0.0057 17.1 0.0 3.2 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF109811 - 1.9e-05 25.1 1.0 2.8 9.0 0.0 4.8 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF109811 - 0.00012 21.8 0.0 0.2 11.6 0.0 3.6 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF109811 - 0.0031 17.4 0.0 0.14 12.2 0.0 3.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF109811 - 0.0034 17.0 0.0 2 8.2 0.0 3.1 1 1 2 3 3 3 1 TPR repeat ANAPC3 PF12895.7 ORF109811 - 0.0055 16.9 0.1 0.016 15.4 0.1 1.9 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 ORF109811 - 0.014 15.5 0.3 0.62 10.2 0.0 3.4 2 1 2 4 4 4 0 Tetratricopeptide repeat DUF525 PF04379.14 ORF109811 - 0.017 15.4 0.0 0.028 14.6 0.0 1.4 1 0 0 1 1 1 0 ApaG domain DUF4381 PF14316.6 ORF109811 - 1.3 9.3 5.9 4.4 7.5 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Amino_oxidase PF01593.24 ORF95850 - 5.1e-67 227.1 0.9 1.1e-44 153.5 0.1 2.1 1 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 ORF95850 - 9e-17 61.1 0.1 2.4e-16 59.7 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 ORF95850 - 3.7e-08 33.3 2.1 2.2e-07 30.8 2.1 2.1 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF95850 - 4.5e-07 29.4 0.1 4.7e-06 26.1 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF95850 - 1.9e-06 27.2 0.8 4.1e-06 26.1 0.8 1.5 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 ORF95850 - 0.0001 22.8 0.2 0.0069 16.9 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF95850 - 0.00013 20.9 0.0 0.0002 20.2 0.0 1.3 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.17 ORF95850 - 0.00013 21.3 0.2 0.00024 20.4 0.2 1.3 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 ORF95850 - 0.00067 19.1 0.1 0.0016 17.9 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF95850 - 0.00079 18.6 0.2 0.0013 17.9 0.2 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein NAD_binding_9 PF13454.6 ORF95850 - 0.013 15.5 0.1 0.04 13.9 0.1 1.8 1 0 0 1 1 1 0 FAD-NAD(P)-binding Pyr_redox_3 PF13738.6 ORF95850 - 0.085 12.1 0.0 0.19 10.9 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF95850 - 0.13 11.3 0.2 0.24 10.4 0.2 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A NUDIX PF00293.28 ORF93139 - 6.8e-14 52.0 0.0 1.1e-13 51.3 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain tRNA_anti-codon PF01336.25 ORF93139 - 2.4e-09 37.0 0.2 4.8e-09 36.1 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain PK PF00224.21 ORF78183 - 6.4e-147 489.0 0.4 9.7e-147 488.4 0.4 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF78183 - 6.1e-25 87.7 0.5 1.6e-24 86.4 0.3 1.9 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF78183 - 0.019 14.1 0.1 0.044 12.9 0.1 1.7 1 1 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family DeoRC PF00455.22 ORF78183 - 0.036 14.0 0.1 14 5.5 0.0 2.6 2 1 0 2 2 2 0 DeoR C terminal sensor domain ABM PF03992.16 ORF7540 - 2.3e-07 30.9 0.2 0.13 12.4 0.1 3.6 3 0 0 3 3 3 3 Antibiotic biosynthesis monooxygenase F5_F8_type_C PF00754.25 ORF72552 - 1.1e-42 145.2 4.8 4.1e-14 52.8 0.0 3.9 4 0 0 4 4 4 3 F5/8 type C domain Mucin PF01456.17 ORF72552 - 3e-05 24.1 43.9 0.012 15.6 15.7 2.6 2 0 0 2 2 2 2 Mucin-like glycoprotein p450 PF00067.22 ORF62224 - 1.2e-41 142.9 0.5 1.8e-41 142.4 0.5 1.3 1 0 0 1 1 1 1 Cytochrome P450 DUF2691 PF10903.8 ORF62224 - 0.032 14.1 0.8 0.13 12.1 0.8 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2691) Ketoacyl-synt_C PF02801.22 ORF52545 - 1e-33 115.8 0.6 1.6e-33 115.2 0.6 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ketoacyl-synt PF00109.26 ORF52545 - 2.4e-27 96.1 0.8 5.8e-27 94.9 0.3 1.9 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain KAsynt_C_assoc PF16197.5 ORF52545 - 0.055 13.9 0.0 0.11 13.0 0.0 1.5 1 0 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension FAE1_CUT1_RppA PF08392.12 ORF52545 - 0.095 12.0 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 FAE1/Type III polyketide synthase-like protein ADD_DNMT3 PF17980.1 ORF52545 - 0.13 12.3 1.0 0.33 11.0 0.3 1.9 2 0 0 2 2 2 0 Cysteine rich ADD domain in DNMT3 Ank_2 PF12796.7 ORF43956 - 9.3e-26 90.2 5.0 1.2e-12 48.3 0.1 3.3 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF43956 - 3.6e-22 78.4 7.3 5.1e-07 30.1 0.0 4.0 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF43956 - 3.3e-15 54.6 2.9 0.008 16.6 0.1 5.5 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF43956 - 6.3e-14 51.9 1.6 3e-07 30.6 0.1 3.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF43956 - 7.1e-12 45.2 5.3 0.0002 21.7 0.2 4.8 4 0 0 4 4 4 3 Ankyrin repeat Zmiz1_N PF18028.1 ORF43956 - 0.018 15.3 0.7 0.55 10.6 0.0 3.0 3 0 0 3 3 3 0 Zmiz1 N-terminal tetratricopeptide repeat domain FYVE PF01363.21 ORF43956 - 0.053 13.7 0.2 0.053 13.7 0.2 2.1 2 0 0 2 2 2 0 FYVE zinc finger RPN1_RPN2_N PF17781.1 ORF43956 - 0.33 10.3 8.6 0.037 13.4 1.8 2.3 1 1 1 2 2 2 0 RPN1/RPN2 N-terminal domain PCP PF02429.15 ORF43956 - 4.1 7.7 7.5 1.7 8.9 1.1 2.8 3 0 0 3 3 3 0 Peridinin-chlorophyll A binding protein NUDIX PF00293.28 ORF40245 - 6.8e-14 52.0 0.0 1.1e-13 51.3 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain tRNA_anti-codon PF01336.25 ORF40245 - 2.4e-09 37.0 0.2 4.8e-09 36.1 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain NUDIX PF00293.28 ORF25396 - 6.8e-14 52.0 0.0 1.1e-13 51.3 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain tRNA_anti-codon PF01336.25 ORF25396 - 2.4e-09 37.0 0.2 4.8e-09 36.1 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain ABC_tran PF00005.27 ORF16919 - 1.3e-16 61.4 0.1 4.4e-11 43.4 0.0 3.2 2 1 0 2 2 2 2 ABC transporter SMC_N PF02463.19 ORF16919 - 7e-09 35.4 0.0 0.015 14.7 0.0 3.1 3 0 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF16919 - 0.00024 20.8 0.5 0.00055 19.6 0.1 1.9 2 0 0 2 2 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 ORF16919 - 0.00029 20.8 1.1 0.6 9.9 0.0 3.0 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system DnaJ_CXXCXGXG PF00684.19 ORF16919 - 0.0031 17.8 0.2 0.007 16.7 0.2 1.5 1 0 0 1 1 1 1 DnaJ central domain AAA_16 PF13191.6 ORF16919 - 0.0056 17.1 0.1 0.07 13.5 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF16919 - 0.0079 16.1 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF16919 - 0.031 13.9 0.1 0.064 12.8 0.1 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF16919 - 0.062 13.6 0.9 0.61 10.4 0.1 2.6 3 0 0 3 3 3 0 AAA domain Viral_helicase1 PF01443.18 ORF16919 - 0.091 12.5 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_23 PF13476.6 ORF16919 - 0.097 13.2 0.5 0.21 12.0 0.5 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF16919 - 0.098 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_30 PF13604.6 ORF16919 - 0.11 12.2 0.1 4.1 7.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 ORF16919 - 0.17 12.2 0.4 18 5.6 0.0 2.9 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_2 PF07724.14 ORF12284 - 1.4e-31 109.9 0.0 2.9e-31 108.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 ORF12284 - 2.6e-13 50.6 0.0 6.5e-13 49.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 ORF12284 - 2e-07 30.9 0.7 1.1e-05 25.4 0.2 2.5 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA_16 PF13191.6 ORF12284 - 4.7e-05 23.8 0.2 0.0013 19.1 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_24 PF13479.6 ORF12284 - 0.00018 21.3 0.0 0.00045 20.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain MCM PF00493.23 ORF12284 - 0.0002 20.6 0.1 0.00089 18.4 0.0 1.9 2 0 0 2 2 2 1 MCM P-loop domain AAA_22 PF13401.6 ORF12284 - 0.00042 20.6 0.2 0.0026 18.0 0.1 2.4 2 1 0 2 2 2 1 AAA domain T2SSE PF00437.20 ORF12284 - 0.0013 17.9 0.0 0.0027 16.8 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein TsaE PF02367.17 ORF12284 - 0.0031 17.5 0.0 0.019 15.0 0.0 2.1 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_5 PF07728.14 ORF12284 - 0.0032 17.5 0.1 0.0081 16.2 0.1 1.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 ORF12284 - 0.0091 16.0 0.0 0.019 15.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.7 ORF12284 - 0.016 14.2 0.1 0.038 12.9 0.0 1.6 2 0 0 2 2 2 0 AAA-like domain AAA_18 PF13238.6 ORF12284 - 0.018 15.6 0.1 0.047 14.2 0.1 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF12284 - 0.02 14.6 0.0 0.24 11.1 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain FtsK_SpoIIIE PF01580.18 ORF12284 - 0.033 13.6 0.0 0.076 12.4 0.0 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family TniB PF05621.11 ORF12284 - 0.034 13.5 0.0 0.66 9.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein AAA_17 PF13207.6 ORF12284 - 0.035 14.5 0.7 13 6.2 0.1 3.0 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 ORF12284 - 0.035 13.5 0.1 0.12 11.7 0.1 1.9 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 ORF12284 - 0.037 13.8 0.0 0.091 12.5 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_3 PF07726.11 ORF12284 - 0.038 13.8 0.0 0.78 9.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 ORF12284 - 0.041 13.8 0.0 0.098 12.6 0.0 1.6 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_33 PF13671.6 ORF12284 - 0.056 13.6 0.0 0.18 12.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 ORF12284 - 0.069 12.6 0.1 0.92 8.9 0.1 2.3 2 0 0 2 2 2 0 PhoH-like protein TIP49 PF06068.13 ORF12284 - 0.072 12.3 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain dNK PF01712.19 ORF12284 - 0.078 12.8 0.0 0.2 11.5 0.0 1.7 1 0 0 1 1 1 0 Deoxynucleoside kinase AAA_28 PF13521.6 ORF12284 - 0.092 13.0 0.5 0.23 11.7 0.0 1.9 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 ORF12284 - 0.094 12.6 0.1 0.29 11.0 0.0 1.8 2 0 0 2 2 1 0 NACHT domain Ret2_MD PF18528.1 ORF12284 - 0.099 13.0 0.6 0.78 10.2 0.3 2.5 2 0 0 2 2 2 0 RNA editing 3' terminal uridylyl transferase 2 middle domain ResIII PF04851.15 ORF12284 - 0.12 12.4 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit RuvB_N PF05496.12 ORF12284 - 0.14 11.9 0.0 0.43 10.3 0.0 1.8 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_29 PF13555.6 ORF12284 - 0.15 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF87 PF01935.17 ORF12284 - 0.15 12.1 0.1 0.66 10.0 0.0 2.0 2 1 0 2 2 2 0 Helicase HerA, central domain AAA_23 PF13476.6 ORF12284 - 0.19 12.2 0.1 0.19 12.2 0.1 1.7 2 1 0 2 2 1 0 AAA domain Glyco_hydro_3_C PF01915.22 ORF104979 - 2.1e-32 112.7 0.0 3e-32 112.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 ORF104979 - 8.2e-22 77.1 0.0 1.9e-21 75.9 0.0 1.7 1 0 0 1 1 1 1 Fibronectin type III-like domain NIF PF03031.18 NODE_7871_length_1499_cov_1565.562158_g3930_i1reverse_frame_1 - 4.7e-06 26.5 1.7 1.2e-05 25.1 0.1 2.3 3 0 0 3 3 3 1 NLI interacting factor-like phosphatase SLC3A2_N PF16028.5 NODE_7866_length_1500_cov_11.184300_g5785_i0forward_frame_1 - 0.052 13.1 0.1 0.14 11.7 0.1 1.8 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus PK PF00224.21 ORF98707 - 6.4e-147 489.0 0.4 9.6e-147 488.4 0.4 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF98707 - 6e-25 87.7 0.5 1.6e-24 86.4 0.3 1.9 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF98707 - 0.019 14.1 0.1 0.044 12.9 0.1 1.7 1 1 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family DeoRC PF00455.22 ORF98707 - 0.036 14.0 0.1 14 5.5 0.0 2.6 2 1 0 2 2 2 0 DeoR C terminal sensor domain bVLRF1 PF18826.1 ORF8270 - 1.1e-39 135.6 0.0 1.1e-39 135.6 0.0 1.6 2 0 0 2 2 1 1 bacteroidetes VLRF1 release factor VATC PF18716.1 ORF8270 - 2.5e-10 40.0 1.6 5.3e-10 39.0 1.6 1.5 1 0 0 1 1 1 1 Vms1-associating treble clef domain acVLRF1 PF18859.1 ORF8270 - 0.018 15.3 1.0 0.092 13.0 1.0 2.3 1 1 0 1 1 1 0 Actinobacteria/chloroflexi VLRF1 release factor Eapp_C PF10238.9 ORF8270 - 0.019 15.0 10.0 0.025 14.7 8.9 1.7 2 0 0 2 2 1 0 E2F-associated phosphoprotein Rrn6 PF10214.9 ORF8270 - 0.054 12.0 5.1 0.076 11.5 5.1 1.2 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Metallothio_Pro PF02069.16 ORF8270 - 0.11 12.8 0.4 0.26 11.5 0.4 1.6 1 0 0 1 1 1 0 Prokaryotic metallothionein zf-MYND PF01753.18 ORF8270 - 0.12 12.5 4.7 0.058 13.5 1.3 2.2 2 0 0 2 2 2 0 MYND finger Cas_Csy4 PF09618.10 ORF8270 - 0.57 10.3 6.2 11 6.1 0.0 2.3 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_Csy4) AP3D1 PF06375.11 ORF8270 - 1.1 9.4 16.3 4 7.7 16.3 1.9 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 CDC45 PF02724.14 ORF8270 - 1.4 7.2 10.7 2 6.6 10.7 1.2 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 ORF8270 - 1.5 8.6 14.1 3 7.6 14.1 1.5 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 NARP1 PF12569.8 ORF8270 - 1.8 7.4 15.0 4 6.2 12.1 2.1 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 Nucleo_P87 PF07267.11 ORF8270 - 2 7.2 12.4 3.6 6.3 12.4 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Connexin PF00029.19 ORF8270 - 2 8.1 6.6 3.4 7.4 6.6 1.3 1 0 0 1 1 1 0 Connexin PBP_sp32 PF07222.12 ORF8270 - 3 7.2 12.0 5.8 6.3 12.0 1.4 1 0 0 1 1 1 0 Proacrosin binding protein sp32 TMEM214 PF10151.9 ORF8270 - 3.3 6.0 7.9 6.3 5.1 7.9 1.4 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator NPR3 PF03666.13 ORF8270 - 3.6 6.3 7.9 5.3 5.7 7.9 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF1682 PF07946.14 ORF8270 - 4.2 6.5 18.9 6.7 5.8 18.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Presenilin PF01080.17 ORF8270 - 6.3 5.5 9.7 9.1 4.9 9.7 1.2 1 0 0 1 1 1 0 Presenilin U79_P34 PF03064.16 ORF8270 - 6.3 6.1 15.2 11 5.3 15.2 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 AAA PF00004.29 ORF79726 - 4e-50 169.7 0.0 4.9e-37 127.3 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF79726 - 5.3e-11 43.2 2.3 0.0012 19.3 0.0 4.1 2 2 2 4 4 4 2 AAA ATPase domain AAA_22 PF13401.6 ORF79726 - 1.3e-10 41.7 5.1 0.00064 20.0 0.5 4.6 2 2 1 3 3 3 2 AAA domain AAA_lid_3 PF17862.1 ORF79726 - 2e-09 37.1 0.6 7.5e-09 35.3 0.2 2.3 2 0 0 2 2 1 1 AAA+ lid domain AAA_33 PF13671.6 ORF79726 - 5.4e-09 36.3 0.0 0.0012 19.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 ORF79726 - 4.1e-07 30.1 0.7 0.00017 21.6 0.1 3.0 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF79726 - 5.4e-07 29.9 0.0 3.1e-06 27.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) ABC_tran PF00005.27 ORF79726 - 1.4e-06 28.9 0.0 0.00025 21.6 0.0 2.4 2 0 0 2 2 2 1 ABC transporter AAA_18 PF13238.6 ORF79726 - 3.6e-06 27.6 0.0 0.015 15.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain NACHT PF05729.12 ORF79726 - 4.3e-06 26.8 1.5 0.21 11.5 0.0 3.6 3 0 0 3 3 3 1 NACHT domain Mg_chelatase PF01078.21 ORF79726 - 1.8e-05 24.2 0.6 0.001 18.5 0.1 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 ORF79726 - 4.2e-05 23.6 0.0 0.35 10.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 ORF79726 - 5.3e-05 23.0 0.0 0.0016 18.2 0.0 2.6 2 2 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 ORF79726 - 5.4e-05 23.2 0.1 1.6 8.6 0.0 3.3 2 2 1 3 3 3 2 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 ORF79726 - 0.00018 21.8 0.0 0.023 15.1 0.0 2.5 2 0 0 2 2 2 1 RNA helicase NB-ARC PF00931.22 ORF79726 - 0.00019 20.7 0.8 1.2 8.3 0.0 3.1 2 1 1 3 3 3 2 NB-ARC domain AAA_17 PF13207.6 ORF79726 - 0.00027 21.4 0.0 0.48 10.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain RuvB_N PF05496.12 ORF79726 - 0.00028 20.7 0.3 0.0078 16.0 0.1 2.7 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_28 PF13521.6 ORF79726 - 0.00053 20.3 0.0 0.056 13.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF79726 - 0.0011 18.6 3.7 0.13 11.9 0.1 3.6 2 2 1 3 3 3 1 AAA domain ATPase PF06745.13 ORF79726 - 0.002 17.5 0.6 0.042 13.2 0.1 2.9 4 0 0 4 4 4 1 KaiC TIP49 PF06068.13 ORF79726 - 0.0031 16.8 0.0 0.36 10.0 0.0 2.3 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_3 PF07726.11 ORF79726 - 0.0041 17.0 0.0 0.021 14.7 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 ORF79726 - 0.0054 16.3 0.1 0.08 12.4 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_30 PF13604.6 ORF79726 - 0.0071 16.1 0.1 0.24 11.1 0.0 2.8 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 ORF79726 - 0.0081 16.2 0.2 0.37 10.8 0.1 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 ORF79726 - 0.011 15.5 0.3 0.097 12.4 0.0 2.6 2 1 0 2 2 2 0 IstB-like ATP binding protein Sigma54_activat PF00158.26 ORF79726 - 0.012 15.3 0.0 1.3 8.7 0.0 2.7 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_29 PF13555.6 ORF79726 - 0.016 14.9 0.9 1.7 8.4 0.1 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain TniB PF05621.11 ORF79726 - 0.037 13.4 0.4 9.7 5.5 0.0 3.2 3 1 2 5 5 5 0 Bacterial TniB protein Torsin PF06309.11 ORF79726 - 0.064 13.4 0.0 5.5 7.1 0.0 2.5 2 0 0 2 2 2 0 Torsin AAA_11 PF13086.6 ORF79726 - 0.098 12.4 0.1 0.23 11.2 0.0 1.6 2 0 0 2 2 1 0 AAA domain ATP-synt_ab PF00006.25 ORF79726 - 0.11 12.1 0.1 1.1 8.8 0.0 2.4 3 0 0 3 3 2 0 ATP synthase alpha/beta family, nucleotide-binding domain PhoH PF02562.16 ORF79726 - 0.15 11.5 0.4 0.52 9.7 0.0 1.9 2 0 0 2 2 2 0 PhoH-like protein Parvo_NS1 PF01057.17 ORF79726 - 0.17 10.9 0.0 0.29 10.2 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_19 PF13245.6 ORF79726 - 0.17 12.2 0.2 0.78 10.1 0.1 2.1 1 1 0 2 2 1 0 AAA domain PPV_E1_C PF00519.17 ORF79726 - 0.21 10.4 0.0 0.32 9.8 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase PLU-1 PF08429.11 ORF79726 - 0.22 10.6 0.0 1.4 8.0 0.0 2.0 2 0 0 2 2 2 0 PLU-1-like protein DUF2075 PF09848.9 ORF79726 - 0.25 10.5 0.2 1.3 8.1 0.1 2.2 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Arabinose_Isome PF02610.15 ORF79344 - 6.5e-180 598.0 0.2 7.9e-180 597.7 0.2 1.1 1 0 0 1 1 1 1 L-arabinose isomerase Arabinose_Iso_C PF11762.8 ORF79344 - 3.3e-46 155.8 0.0 1.1e-45 154.1 0.0 1.9 2 0 0 2 2 2 1 L-arabinose isomerase C-terminal domain PaRep2a PF07903.11 ORF79344 - 0.083 12.7 0.1 0.78 9.6 0.1 2.2 2 0 0 2 2 2 0 PaRep2a protein LRR_6 PF13516.6 ORF77272 - 0.022 14.8 8.6 43 4.5 0.1 6.7 7 0 0 7 7 7 0 Leucine Rich repeat LRR_1 PF00560.33 ORF77272 - 0.13 12.9 1.0 13 6.8 0.2 3.8 4 0 0 4 4 4 0 Leucine Rich Repeat LRR_8 PF13855.6 ORF77272 - 4.4 7.2 8.1 35 4.3 0.0 4.4 5 1 0 5 5 5 0 Leucine rich repeat LRR_4 PF12799.7 ORF77272 - 8 7.0 7.8 12 6.5 1.6 4.1 4 1 0 5 5 5 0 Leucine Rich repeats (2 copies) XG_FTase PF03254.13 ORF75038 - 0.099 11.2 0.0 0.16 10.6 0.0 1.2 1 0 0 1 1 1 0 Xyloglucan fucosyltransferase Amino_oxidase PF01593.24 ORF65942 - 3.2e-67 227.8 0.7 9.6e-45 153.7 0.1 2.0 1 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 ORF65942 - 8.9e-17 61.1 0.1 2.4e-16 59.7 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 ORF65942 - 1.5e-08 34.6 1.6 4.9e-08 32.9 1.6 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF65942 - 4.2e-07 29.5 0.1 4.6e-06 26.1 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF65942 - 2.3e-06 27.0 1.1 5.1e-06 25.8 1.1 1.5 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 ORF65942 - 0.00012 20.9 0.0 0.0002 20.2 0.0 1.3 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.17 ORF65942 - 0.00013 21.3 0.2 0.00024 20.4 0.2 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 ORF65942 - 0.00013 22.5 0.1 0.0069 16.9 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 ORF65942 - 0.0008 18.6 0.2 0.0013 17.9 0.2 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_oxidored PF12831.7 ORF65942 - 0.0023 17.3 2.3 0.0042 16.5 1.4 2.0 2 1 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 ORF65942 - 0.014 15.4 0.1 0.04 13.9 0.1 1.8 1 0 0 1 1 1 0 FAD-NAD(P)-binding Pyr_redox_3 PF13738.6 ORF65942 - 0.079 12.2 0.0 0.18 11.0 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF65942 - 0.15 11.1 0.8 0.24 10.4 0.2 1.6 2 0 0 2 2 2 0 Glucose inhibited division protein A RCC1_2 PF13540.6 ORF62456 - 1.8e-18 65.8 19.3 0.43 10.5 0.0 10.4 10 0 0 10 10 10 9 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF62456 - 0.00038 20.6 9.9 33 4.5 0.0 7.9 5 2 1 6 6 6 2 Uncharacterised ACR, YagE family COG1723 FtsQ PF03799.15 ORF62456 - 0.0018 19.1 2.0 25 5.7 0.1 5.6 1 1 5 6 6 6 1 Cell division protein FtsQ Aa_trans PF01490.18 ORF61194 - 1.2e-60 205.4 30.8 1.4e-60 205.2 30.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein MFS_1 PF07690.16 ORF52689 - 1.7e-15 56.8 20.3 2.7e-15 56.2 20.3 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Arabinose_Isome PF02610.15 ORF48648 - 6.5e-180 598.0 0.2 7.9e-180 597.7 0.2 1.1 1 0 0 1 1 1 1 L-arabinose isomerase Arabinose_Iso_C PF11762.8 ORF48648 - 3.3e-46 155.8 0.0 1.1e-45 154.1 0.0 1.9 2 0 0 2 2 2 1 L-arabinose isomerase C-terminal domain PaRep2a PF07903.11 ORF48648 - 0.083 12.7 0.1 0.78 9.6 0.1 2.2 2 0 0 2 2 2 0 PaRep2a protein DnaJ PF00226.31 ORF47231 - 0.073 13.2 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 DnaJ domain DUF853 PF05872.12 ORF45343 - 9.9e-252 835.9 0.2 1.1e-251 835.8 0.2 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.9 ORF45343 - 6.6e-07 28.6 0.1 0.00013 21.0 0.1 2.2 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_10 PF12846.7 ORF45343 - 1.6e-06 27.3 0.0 0.0022 17.0 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 ORF45343 - 2e-06 28.1 0.2 0.0012 19.2 0.1 2.5 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.17 ORF45343 - 3.6e-06 27.3 0.0 6.4e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain ResIII PF04851.15 ORF45343 - 5.6e-06 26.5 0.1 0.0042 17.1 0.1 2.4 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit FtsK_SpoIIIE PF01580.18 ORF45343 - 0.00017 21.0 0.1 0.0006 19.2 0.0 1.8 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_16 PF13191.6 ORF45343 - 0.00022 21.6 1.5 0.0073 16.7 1.0 2.6 1 1 0 1 1 1 1 AAA ATPase domain DUF2075 PF09848.9 ORF45343 - 0.00056 19.3 0.6 0.16 11.2 0.2 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 ORF45343 - 0.00084 19.8 0.0 0.3 11.5 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 ORF45343 - 0.0013 18.5 0.3 0.0039 16.9 0.2 1.8 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF45343 - 0.0056 16.2 0.1 0.01 15.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region CbiA PF01656.23 ORF45343 - 0.0065 16.5 0.0 0.01 15.9 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zot PF05707.12 ORF45343 - 0.008 15.8 0.0 0.048 13.3 0.0 2.0 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_28 PF13521.6 ORF45343 - 0.012 15.8 0.4 0.028 14.7 0.4 1.5 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 ORF45343 - 0.019 15.3 0.1 0.05 13.9 0.1 1.6 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 ORF45343 - 0.03 13.4 0.1 0.057 12.5 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein SRP54 PF00448.22 ORF45343 - 0.032 13.9 0.1 0.071 12.7 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 ORF45343 - 0.034 14.0 0.2 0.076 12.9 0.2 1.5 1 0 0 1 1 1 0 NTPase AAA_18 PF13238.6 ORF45343 - 0.065 13.8 0.0 0.18 12.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_6 PF12774.7 ORF45343 - 0.074 12.0 0.2 0.14 11.1 0.2 1.4 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region AAA_25 PF13481.6 ORF45343 - 0.083 12.5 0.1 0.27 10.8 0.1 1.9 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 ORF45343 - 0.099 12.6 0.1 11 5.8 0.0 2.4 2 0 0 2 2 2 0 Rad17 P-loop domain HTH_41 PF14502.6 ORF45343 - 0.12 12.0 0.2 0.48 10.2 0.0 2.2 2 0 0 2 2 1 0 Helix-turn-helix domain NACHT PF05729.12 ORF45343 - 0.77 9.7 2.5 0.49 10.3 0.1 1.9 3 0 0 3 3 2 0 NACHT domain ABC_tran PF00005.27 ORF45017 - 1.4e-33 116.3 0.1 2.9e-33 115.3 0.1 1.5 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF45017 - 1.6e-27 96.9 7.4 2.4e-27 96.3 7.4 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF45017 - 5.4e-07 29.3 3.7 1.9e-05 24.2 3.7 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain FKBP_N_2 PF18023.1 ORF45017 - 0.0019 18.3 3.2 0.0064 16.6 2.8 2.0 1 1 1 2 2 2 1 BDBT FKBP like N-terminal AAA_21 PF13304.6 ORF45017 - 0.0053 16.6 0.0 0.94 9.2 0.0 2.3 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF45017 - 0.0067 16.5 0.4 0.019 15.0 0.3 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF87 PF01935.17 ORF45017 - 0.0097 16.0 1.5 0.021 14.9 0.9 1.9 1 1 0 1 1 1 1 Helicase HerA, central domain DUF5507 PF17612.2 ORF45017 - 0.02 14.6 0.6 0.039 13.7 0.6 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5507) NB-ARC PF00931.22 ORF45017 - 0.024 13.8 1.4 0.08 12.1 1.4 1.8 1 1 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF45017 - 0.038 13.7 0.0 0.081 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain IstB_IS21 PF01695.17 ORF45017 - 0.076 12.7 0.1 0.42 10.3 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF45017 - 0.14 12.6 0.0 0.24 11.8 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 ORF45017 - 1.2 9.6 11.3 5 7.6 11.3 2.1 1 1 0 1 1 1 0 AAA domain tRNA-synt_2c PF01411.19 ORF28336 - 7.3e-37 127.1 0.0 8.4e-32 110.4 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class II (A) tRNA_SAD PF07973.14 ORF28336 - 0.0086 16.2 0.2 0.025 14.6 0.2 1.9 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain p450 PF00067.22 ORF27367 - 9.5e-50 169.7 0.6 1.5e-49 169.0 0.6 1.2 1 0 0 1 1 1 1 Cytochrome P450 LRR_6 PF13516.6 ORF112354 - 0.0055 16.7 5.3 43 4.5 0.1 6.4 6 0 0 6 6 6 1 Leucine Rich repeat LRR_1 PF00560.33 ORF112354 - 0.84 10.4 2.2 13 6.8 0.2 3.3 3 0 0 3 3 3 0 Leucine Rich Repeat Spectrin PF00435.21 ORF108777 - 0.024 15.1 6.8 0.024 15.1 6.8 3.8 2 1 1 3 3 3 0 Spectrin repeat PIN_6 PF17146.4 ORF108777 - 0.21 12.1 1.3 1.2 9.6 0.0 2.8 2 1 0 2 2 2 0 PIN domain of ribonuclease Ndc1_Nup PF09531.10 ORF108777 - 0.76 8.4 8.7 1 8.0 8.7 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup YtxH PF12732.7 ORF108777 - 1.6 9.3 17.0 0.19 12.3 1.0 4.3 4 1 0 4 4 4 0 YtxH-like protein HisKA_3 PF07730.13 ORF108224 - 1.5e-14 54.3 2.7 1.5e-14 54.3 2.7 2.5 2 0 0 2 2 2 1 Histidine kinase MASE1 PF05231.14 ORF108224 - 2.7e-14 53.0 45.4 8e-14 51.5 45.4 1.9 1 1 0 1 1 1 1 MASE1 HATPase_c PF02518.26 ORF108224 - 9.5e-07 29.3 0.2 4.6e-06 27.1 0.2 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF108224 - 0.068 13.1 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain GIT_CC PF16559.5 ORF108224 - 0.079 12.8 1.3 0.66 9.9 0.8 2.2 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF3431 PF11913.8 ORF106910 - 0.00051 19.9 2.1 0.11 12.3 0.1 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF3431) SLATT_1 PF18181.1 NODE_7918_length_1497_cov_3.739398_g5827_i0reverse_frame_1 - 3.7 7.5 5.2 4.8 7.1 1.0 2.6 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 NIF PF03031.18 NODE_7871_length_1499_cov_1565.562158_g3930_i1reverse_frame_2 - 0.00075 19.3 0.0 0.0014 18.5 0.0 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase UPF0227 PF05728.12 NODE_7866_length_1500_cov_11.184300_g5785_i0reverse_frame_2 - 0.046 13.7 1.0 0.14 12.1 1.0 1.8 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) HBD PF18534.1 NODE_7866_length_1500_cov_11.184300_g5785_i0reverse_frame_2 - 0.29 11.3 6.3 0.12 12.5 1.6 2.7 2 0 0 2 2 2 0 Helical bundle domain DUF4199 PF13858.6 NODE_7866_length_1500_cov_11.184300_g5785_i0reverse_frame_2 - 2.3 8.6 5.8 0.68 10.3 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) DUF745 PF05335.13 NODE_7866_length_1500_cov_11.184300_g5785_i0reverse_frame_2 - 9.5 5.9 10.6 2 8.1 5.9 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF745) Pkinase PF00069.25 ORF94571 - 4.1e-54 183.7 0.0 6.3e-54 183.1 0.0 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94571 - 3e-20 72.6 0.0 6.1e-13 48.7 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase APH PF01636.23 ORF94571 - 0.00011 22.3 1.2 0.00043 20.3 0.5 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF94571 - 0.0021 17.1 0.1 0.0029 16.6 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_C PF00433.24 ORF94571 - 0.015 16.0 0.2 0.038 14.7 0.2 2.0 1 1 0 1 1 1 0 Protein kinase C terminal domain RIO1 PF01163.22 ORF94571 - 0.06 12.9 0.6 0.11 12.1 0.6 1.3 1 0 0 1 1 1 0 RIO1 family Kinase-like PF14531.6 ORF94571 - 0.15 11.4 0.0 0.45 9.8 0.0 1.7 1 1 0 1 1 1 0 Kinase-like Aft1_OSA PF11785.8 ORF94571 - 3.1 8.3 7.0 18 5.9 0.8 3.3 3 0 0 3 3 3 0 Aft1 osmotic stress response (OSM) domain p450 PF00067.22 ORF89910 - 7e-49 166.8 2.0 1e-48 166.3 2.0 1.3 1 0 0 1 1 1 1 Cytochrome P450 PHO4 PF01384.20 ORF69447 - 2.8e-88 296.2 16.9 3.4e-88 295.9 16.9 1.1 1 0 0 1 1 1 1 Phosphate transporter family Myc_target_1 PF15179.6 ORF69447 - 0.0018 18.2 1.2 0.049 13.5 0.0 2.4 2 0 0 2 2 2 1 Myc target protein 1 RAP PF08373.10 ORF62898 - 6.5e-06 26.2 0.0 1.1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 RAP domain IKBKB_SDD PF18397.1 ORF62898 - 0.081 12.2 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 IQBAL scaffold dimerization domain PHO4 PF01384.20 ORF54796 - 3.6e-88 295.9 19.7 4.2e-88 295.6 19.7 1.0 1 0 0 1 1 1 1 Phosphate transporter family Myc_target_1 PF15179.6 ORF54796 - 0.013 15.4 1.1 0.4 10.5 0.0 2.5 2 0 0 2 2 2 0 Myc target protein 1 BBS2_N PF14781.6 ORF37643 - 0.065 13.1 0.2 0.24 11.3 0.2 2.0 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Pyridoxal_deC PF00282.19 ORF29089 - 1.9e-45 155.2 0.0 2.7e-45 154.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain DegT_DnrJ_EryC1 PF01041.17 ORF29089 - 0.12 11.7 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family BBS2_N PF14781.6 ORF101709 - 0.065 13.1 0.2 0.24 11.3 0.2 2.0 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal PNPase_C PF12111.8 NODE_7918_length_1497_cov_3.739398_g5827_i0reverse_frame_3 - 1.2e-14 53.4 14.9 1.5e-14 53.1 6.8 2.5 2 0 0 2 2 2 2 Polyribonucleotide phosphorylase C terminal DUF2976 PF11190.8 NODE_7918_length_1497_cov_3.739398_g5827_i0forward_frame_2 - 9.2 6.1 7.0 18 5.2 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2976) ABC_membrane PF00664.23 ORF5220 - 1.8e-17 63.9 5.1 2.7e-17 63.3 5.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF5220 - 8.9e-10 39.2 1.2 4.1e-09 37.1 0.0 2.2 2 0 0 2 2 2 1 ABC transporter CDC45 PF02724.14 ORF5220 - 0.016 13.5 5.1 0.022 13.1 5.1 1.1 1 0 0 1 1 1 0 CDC45-like protein DDE_Tnp_1 PF01609.21 ORF5220 - 0.027 14.1 0.6 0.044 13.4 0.6 1.3 1 0 0 1 1 1 0 Transposase DDE domain DUF4731 PF15875.5 ORF5220 - 0.12 12.6 0.0 0.29 11.3 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) DARPP-32 PF05395.12 ORF5220 - 2.5 8.3 8.5 4.1 7.6 8.5 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 ELO PF01151.18 ORF51140 - 1.5e-08 34.5 6.6 2.2e-08 34.0 6.6 1.2 1 0 0 1 1 1 1 GNS1/SUR4 family Patatin PF01734.22 ORF51140 - 2.6e-07 31.1 0.0 0.00012 22.3 0.0 2.3 1 1 0 1 1 1 1 Patatin-like phospholipase DSPc PF00782.20 ORF50583 - 5.7e-08 32.7 0.0 1.5e-07 31.3 0.0 1.7 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 ORF50583 - 1.1e-07 32.1 0.2 8e-07 29.3 0.0 2.2 2 0 0 2 2 2 1 Inositol hexakisphosphate Y_phosphatase PF00102.27 ORF50583 - 0.00027 20.6 0.0 0.00052 19.6 0.0 1.4 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DUF442 PF04273.13 ORF50583 - 0.00074 19.6 1.0 0.0036 17.4 0.0 2.6 3 0 0 3 3 3 1 Putative phosphatase (DUF442) Glyco_hydro_71 PF03659.14 ORF5007 - 6.7e-07 28.5 0.0 0.00051 19.0 0.0 2.1 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF5007 - 0.0006 19.4 0.0 0.75 9.2 0.0 2.4 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF5007 - 0.0042 16.3 0.0 0.077 12.1 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 Glyco_hydro_71 PF03659.14 ORF46301 - 6e-07 28.6 0.0 0.00051 19.0 0.0 2.2 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF46301 - 0.0007 19.2 0.0 0.75 9.2 0.0 2.4 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF46301 - 0.0012 18.0 0.1 0.023 13.8 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 DNA_meth_N PF18284.1 ORF44750 - 0.045 13.6 1.4 11 6.0 0.0 2.7 2 0 0 2 2 2 0 DNA methylase N-terminal domain Glyco_hydro_71 PF03659.14 ORF38557 - 6e-07 28.6 0.0 0.00051 19.0 0.0 2.2 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF38557 - 0.0007 19.2 0.0 0.75 9.2 0.0 2.4 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF38557 - 0.0012 18.0 0.1 0.023 13.8 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 Glyco_hydro_71 PF03659.14 ORF26845 - 6e-07 28.6 0.0 0.00051 19.0 0.0 2.2 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF26845 - 0.0007 19.2 0.0 0.75 9.2 0.0 2.4 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF26845 - 0.0012 18.0 0.1 0.023 13.8 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 Amidohydro_1 PF01979.20 ORF23268 - 6.5e-28 98.0 0.0 8.6e-28 97.6 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF23268 - 0.0011 18.5 0.0 0.013 15.0 0.0 2.2 2 0 0 2 2 2 1 Amidohydrolase family Mgm101p PF06420.12 ORF23268 - 0.2 11.1 0.0 0.36 10.3 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial genome maintenance MGM101 Glyco_hydro_71 PF03659.14 ORF11227 - 5.3e-07 28.8 0.0 0.00049 19.0 0.0 2.2 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF11227 - 0.0006 19.4 0.0 0.63 9.4 0.0 2.3 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF11227 - 0.0012 18.0 0.1 0.023 13.8 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 Glyco_hydro_43 PF04616.14 ORF11134 - 4.8e-78 262.4 0.0 6.3e-78 262.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 GH43_C2 PF17851.1 ORF11134 - 7.5e-22 78.0 0.0 1.2e-21 77.4 0.0 1.3 1 0 0 1 1 1 1 Beta xylosidase C-terminal Concanavalin A-like domain Nuc_sug_transp PF04142.15 ORF99819 - 1.3e-10 41.0 13.5 1.8e-09 37.2 13.5 2.0 1 1 0 1 1 1 1 Nucleotide-sugar transporter Picorna_P3A PF06363.11 ORF99819 - 0.96 9.4 3.8 2.3 8.1 2.0 2.4 2 0 0 2 2 2 0 Picornaviridae P3A protein Abhydrolase_1 PF00561.20 ORF91143 - 1.5e-08 34.6 0.0 4.2e-07 29.9 0.0 2.1 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF91143 - 2.6e-08 33.9 0.2 1.1e-06 28.7 0.0 2.4 1 1 1 2 2 2 1 TAP-like protein AMP-binding PF00501.28 ORF83764 - 5e-60 203.3 0.2 7.1e-60 202.8 0.2 1.1 1 0 0 1 1 1 1 AMP-binding enzyme SpoIIM PF01944.17 ORF83764 - 0.01 15.9 0.3 0.016 15.2 0.3 1.2 1 0 0 1 1 1 0 Stage II sporulation protein M Aminotran_4 PF01063.19 ORF83368 - 9.8e-20 71.4 0.0 1.3e-19 71.0 0.0 1.2 1 0 0 1 1 1 1 Amino-transferase class IV Methyltransf_3 PF01596.17 ORF83368 - 1.8e-15 56.7 0.0 2.8e-15 56.1 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF83368 - 1.4e-09 38.9 0.1 6.7e-09 36.7 0.0 2.2 3 0 0 3 3 3 1 Methyltransferase domain PCMT PF01135.19 ORF83368 - 0.013 15.3 0.1 0.035 13.8 0.0 1.7 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF4419 PF14388.6 ORF82453 - 9.1e-61 205.9 0.0 1.3e-60 205.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) Aa_trans PF01490.18 ORF79680 - 1.2e-60 205.4 30.8 1.3e-60 205.2 30.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Ank_2 PF12796.7 ORF79231 - 9.2e-26 90.3 5.4 1.1e-12 48.3 0.1 3.3 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF79231 - 3.3e-22 78.5 7.3 5e-07 30.1 0.0 4.0 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF79231 - 3.2e-15 54.7 2.9 0.0079 16.6 0.1 5.5 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF79231 - 6.2e-14 51.9 1.6 3e-07 30.6 0.1 3.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF79231 - 6.8e-12 45.3 5.3 0.0002 21.7 0.2 4.8 4 0 0 4 4 4 3 Ankyrin repeat FYVE PF01363.21 ORF79231 - 0.052 13.7 0.2 0.052 13.7 0.2 2.1 2 0 0 2 2 2 0 FYVE zinc finger Zmiz1_N PF18028.1 ORF79231 - 0.054 13.8 1.1 0.55 10.6 0.0 2.9 3 0 0 3 3 3 0 Zmiz1 N-terminal tetratricopeptide repeat domain RPN1_RPN2_N PF17781.1 ORF79231 - 0.3 10.5 8.6 0.031 13.7 1.7 2.4 1 1 1 2 2 2 0 RPN1/RPN2 N-terminal domain PCP PF02429.15 ORF79231 - 4.8 7.5 7.8 1.7 9.0 1.1 2.8 3 0 0 3 3 3 0 Peridinin-chlorophyll A binding protein Ion_trans PF00520.31 ORF69133 - 1.7e-29 102.8 13.2 2.8e-29 102.1 13.2 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF69133 - 8.7e-09 34.3 1.4 0.00093 18.6 0.1 3.2 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF69133 - 9.1e-08 32.5 0.8 1.3e-06 28.7 0.3 2.4 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF69133 - 1.1e-07 31.2 0.4 0.034 14.1 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF69133 - 1.1e-06 27.8 1.3 0.014 14.9 0.0 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF69133 - 0.00019 21.2 4.1 0.0014 18.5 0.6 2.7 2 1 1 3 3 3 1 EF-hand domain pair M-inducer_phosp PF06617.13 ORF69133 - 0.19 11.0 1.3 0.29 10.4 1.3 1.3 1 0 0 1 1 1 0 M-phase inducer phosphatase DUF2207 PF09972.9 ORF69133 - 0.54 8.9 1.3 9.2 4.9 3.0 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) TPR_2 PF07719.17 ORF64385 - 1.3e-21 74.9 14.2 0.00013 21.8 0.3 6.7 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_16 PF13432.6 ORF64385 - 1.2e-18 67.5 19.8 7.5e-08 32.9 1.7 4.7 3 1 1 4 4 4 4 Tetratricopeptide repeat DnaJ PF00226.31 ORF64385 - 1.1e-17 63.9 0.3 3e-17 62.5 0.3 1.9 1 0 0 1 1 1 1 DnaJ domain TPR_19 PF14559.6 ORF64385 - 1.3e-16 60.8 7.6 2.6e-06 27.8 0.1 4.5 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF64385 - 9.3e-15 53.7 14.8 0.00037 20.2 0.4 5.2 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_17 PF13431.6 ORF64385 - 2.2e-11 43.3 2.0 0.047 14.1 0.0 4.9 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF64385 - 3.3e-11 43.0 27.1 0.0072 17.1 1.1 7.3 3 3 4 7 7 7 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF64385 - 9.7e-10 38.0 2.1 0.0047 16.6 0.1 5.8 5 1 1 6 6 6 2 TPR repeat TPR_8 PF13181.6 ORF64385 - 8.8e-09 34.9 5.3 0.084 13.1 0.1 4.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF64385 - 2.1e-06 27.9 15.3 0.63 10.4 0.1 5.0 3 1 0 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF64385 - 1.8e-05 24.9 3.3 0.18 12.0 0.0 3.7 3 1 1 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_MalT PF17874.1 ORF64385 - 3.5e-05 23.4 4.8 0.00052 19.5 0.4 2.3 1 1 1 2 2 2 2 MalT-like TPR region TPR_4 PF07721.14 ORF64385 - 0.00011 22.5 25.9 0.023 15.3 4.2 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF64385 - 0.00041 20.8 15.9 1.2 10.0 0.1 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF64385 - 0.0031 17.6 1.5 0.0031 17.6 1.5 5.0 4 2 1 5 5 5 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF64385 - 0.013 15.6 0.2 0.12 12.4 0.1 2.7 3 1 1 4 4 4 0 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 ORF64385 - 0.015 15.3 10.4 0.53 10.4 0.0 4.8 5 0 0 5 5 4 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF64385 - 0.32 11.3 7.9 5.9 7.3 0.0 4.1 2 1 3 5 5 4 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF64385 - 1.1 9.3 20.4 0.81 9.6 0.4 5.6 6 0 0 6 6 6 0 Tetratricopeptide repeat ABC_tran PF00005.27 ORF58992 - 9.4e-34 116.9 1.9 2.3e-22 80.0 0.0 3.5 4 1 0 4 4 4 2 ABC transporter AAA_21 PF13304.6 ORF58992 - 1.4e-12 48.0 3.0 0.00025 20.9 0.0 3.5 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF58992 - 3.6e-08 33.1 0.0 0.021 14.2 0.0 3.4 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain ABC_tran_Xtn PF12848.7 ORF58992 - 2.4e-06 27.5 2.6 2.4e-06 27.5 2.6 2.6 2 0 0 2 2 2 1 ABC transporter AAA_23 PF13476.6 ORF58992 - 5.7e-05 23.7 5.9 0.0039 17.7 0.0 3.2 3 0 0 3 3 3 1 AAA domain Zeta_toxin PF06414.12 ORF58992 - 0.00069 19.0 0.3 0.0021 17.4 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin RsgA_GTPase PF03193.16 ORF58992 - 0.0011 18.9 0.0 0.0031 17.4 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF58992 - 0.002 18.2 0.0 0.0079 16.3 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF58992 - 0.0022 17.7 0.0 0.0045 16.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF58992 - 0.0036 17.6 0.0 0.038 14.3 0.0 2.6 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 ORF58992 - 0.0044 17.3 0.4 0.034 14.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF58992 - 0.0069 16.6 0.2 0.067 13.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF58992 - 0.013 15.9 0.2 0.036 14.4 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain SbcCD_C PF13558.6 ORF58992 - 0.014 15.6 0.1 3.2 8.0 0.0 3.6 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit MCU PF04678.13 ORF58992 - 0.015 15.4 4.0 4 7.5 0.1 3.2 3 0 0 3 3 3 0 Mitochondrial calcium uniporter AAA_18 PF13238.6 ORF58992 - 0.018 15.6 2.6 0.032 14.8 0.0 2.8 2 2 2 4 4 4 0 AAA domain ATP_bind_1 PF03029.17 ORF58992 - 0.065 13.0 0.2 0.26 11.1 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 ORF58992 - 0.14 12.5 0.0 0.45 10.9 0.0 1.9 2 0 0 2 2 1 0 RNA helicase Dynamin_N PF00350.23 ORF58992 - 0.22 11.6 2.7 0.32 11.0 0.0 2.4 3 0 0 3 3 3 0 Dynamin family AAA_15 PF13175.6 ORF58992 - 0.25 11.0 9.3 0.75 9.4 0.1 2.9 2 1 1 3 3 3 0 AAA ATPase domain FtsK_SpoIIIE PF01580.18 ORF58992 - 0.34 10.2 0.0 0.34 10.2 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF3987 PF13148.6 ORF58992 - 3.7 6.5 13.4 3.9 6.4 0.0 3.2 3 0 0 3 3 2 0 Protein of unknown function (DUF3987) Ppx-GppA PF02541.16 ORF41774 - 1.5e-103 346.2 0.7 2.6e-103 345.4 0.7 1.4 1 0 0 1 1 1 1 Ppx/GppA phosphatase family DDR PF08841.10 ORF41774 - 0.1 11.5 0.2 0.17 10.8 0.2 1.4 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain HD PF01966.22 ORF41774 - 0.12 12.7 0.0 0.32 11.2 0.0 1.7 2 0 0 2 2 2 0 HD domain DUF150 PF02576.17 ORF41774 - 0.14 12.6 0.1 0.88 10.0 0.0 2.1 2 0 0 2 2 2 0 RimP N-terminal domain DUF4419 PF14388.6 ORF19008 - 9.1e-61 205.9 0.0 1.3e-60 205.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) Aa_trans PF01490.18 ORF100264 - 1.1e-44 152.8 7.5 1.3e-44 152.5 7.5 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Antimicrobial_8 PF08103.11 NODE_8062_length_1489_cov_148.947043_g3616_i1reverse_frame_3 - 2.2 8.6 4.0 8 6.8 0.7 2.5 2 0 0 2 2 2 0 Uperin family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks15.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks15.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks15.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks15.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Myticin-prepro PF10690.9 NODE_46119_length_422_cov_1.695090_g38315_i0reverse_frame_1 - 0.068 13.4 0.5 0.11 12.8 0.5 1.3 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel DUF1298 PF06974.13 NODE_46098_length_422_cov_3.987080_g38294_i0forward_frame_1 - 5e-06 26.5 0.1 7e-06 26.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) BUD22 PF09073.10 NODE_46089_length_422_cov_75.105943_g38285_i0forward_frame_1 - 0.00041 19.8 18.5 0.00041 19.8 18.5 2.1 1 1 1 2 2 2 1 BUD22 PIEZO PF15917.5 NODE_46089_length_422_cov_75.105943_g38285_i0forward_frame_1 - 0.52 9.7 10.8 0.65 9.4 10.8 1.2 1 0 0 1 1 1 0 Piezo MCM_bind PF09739.9 NODE_46089_length_422_cov_75.105943_g38285_i0forward_frame_1 - 2.5 6.4 6.6 3.9 5.8 6.6 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor DUSP PF06337.12 NODE_46082_length_422_cov_86.103359_g38278_i0forward_frame_1 - 1.2e-06 29.0 0.1 1.4e-06 28.8 0.1 1.2 1 0 0 1 1 1 1 DUSP domain Pet191_N PF10203.9 NODE_46080_length_422_cov_88.173127_g38276_i0reverse_frame_1 - 1e-08 35.3 4.5 1.6e-08 34.7 4.5 1.3 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein PET191 2-Hacid_dh_C PF02826.19 NODE_46076_length_422_cov_95.416021_g38272_i0forward_frame_1 - 2.8e-05 23.5 0.0 4.3e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sulfotransfer_2 PF03567.14 NODE_46068_length_422_cov_132.253230_g38264_i0forward_frame_1 - 0.022 14.7 2.1 0.038 13.9 2.1 1.5 1 1 0 1 1 1 0 Sulfotransferase family H-kinase_dim PF02895.14 NODE_46067_length_422_cov_137.576227_g38263_i0reverse_frame_1 - 0.71 10.3 4.2 2.6 8.5 4.2 2.0 1 1 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain Gp45_2 PF17470.2 NODE_46066_length_422_cov_142.211886_g38262_i0reverse_frame_1 - 0.039 13.9 0.9 0.085 12.8 0.9 1.7 1 1 0 1 1 1 0 Phage gene product 45.2 TMEM169 PF15052.6 NODE_46059_length_422_cov_171.741602_g38255_i0forward_frame_1 - 2 8.5 10.4 2.1 8.4 9.5 1.6 1 1 0 1 1 1 0 TMEM169 protein family DUF5045 PF16464.5 NODE_46058_length_422_cov_179.816537_g38254_i0reverse_frame_1 - 0.11 12.8 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5045) Carb_anhydrase PF00194.21 NODE_46049_length_422_cov_563.124031_g38245_i0forward_frame_1 - 1.4e-20 73.9 0.0 2.1e-20 73.3 0.0 1.2 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DUF2227 PF09988.9 NODE_46040_length_423_cov_1.551546_g38238_i0reverse_frame_1 - 0.058 13.3 0.1 0.084 12.8 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized metal-binding protein (DUF2227) DUF2623 PF11115.8 NODE_46039_length_423_cov_1.703608_g38237_i0reverse_frame_1 - 0.084 13.0 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2623) ACT PF01842.25 NODE_46033_length_423_cov_2.115979_g38231_i0reverse_frame_1 - 0.00012 21.7 0.1 0.00018 21.2 0.1 1.3 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 NODE_46033_length_423_cov_2.115979_g38231_i0reverse_frame_1 - 0.0027 18.2 0.0 0.0083 16.7 0.0 1.7 1 1 0 1 1 1 1 ACT domain DJ-1_PfpI PF01965.24 NODE_45992_length_423_cov_113.402062_g38190_i0forward_frame_1 - 1.3e-15 57.6 0.0 1.5e-15 57.4 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family MARVEL PF01284.23 NODE_45991_length_423_cov_115.541237_g38189_i0forward_frame_1 - 0.0033 17.5 0.4 0.004 17.2 0.4 1.2 1 0 0 1 1 1 1 Membrane-associating domain FAM176 PF14851.6 NODE_45991_length_423_cov_115.541237_g38189_i0forward_frame_1 - 0.13 11.9 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 FAM176 family zf-RanBP PF00641.18 NODE_45980_length_423_cov_459.121134_g38178_i0reverse_frame_1 - 9.9e-10 37.6 6.5 1.5e-09 37.0 6.5 1.3 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others Rrn6 PF10214.9 NODE_45980_length_423_cov_459.121134_g38178_i0reverse_frame_1 - 0.13 10.7 4.0 0.15 10.5 4.0 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor CDC45 PF02724.14 NODE_45980_length_423_cov_459.121134_g38178_i0reverse_frame_1 - 9.6 4.4 7.3 9.5 4.4 7.3 1.0 1 0 0 1 1 1 0 CDC45-like protein Bacteriocin_IId PF09221.10 NODE_45980_length_423_cov_459.121134_g38178_i0forward_frame_1 - 0.13 12.4 6.1 0.3 11.3 6.1 1.6 1 0 0 1 1 1 0 Bacteriocin class IId cyclical uberolysin-like Herpes_UL32 PF06070.11 NODE_45980_length_423_cov_459.121134_g38178_i0forward_frame_1 - 1.3 6.7 8.1 1.4 6.6 8.1 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 Acyl-thio_N PF12590.8 NODE_45978_length_423_cov_566.146907_g35117_i1reverse_frame_1 - 0.017 15.7 1.4 0.02 15.5 1.4 1.2 1 0 0 1 1 1 0 Acyl-ATP thioesterase MRPL52 PF18699.1 NODE_45978_length_423_cov_566.146907_g35117_i1reverse_frame_1 - 0.095 12.9 3.9 0.71 10.1 1.7 2.3 2 0 0 2 2 2 0 Mitoribosomal protein mL52 Helicase_C PF00271.31 NODE_45970_length_424_cov_1.730077_g38170_i0forward_frame_2 - 6.5e-21 74.7 0.0 7.7e-21 74.5 0.0 1.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 NODE_45970_length_424_cov_1.730077_g38170_i0forward_frame_2 - 5.6e-05 22.5 0.0 6.5e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase HDA2-3 PF11496.8 NODE_45970_length_424_cov_1.730077_g38170_i0forward_frame_2 - 0.0014 17.9 0.0 0.0014 17.9 0.0 1.1 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 TrkA_N PF02254.18 NODE_45969_length_424_cov_1.768638_g38169_i0reverse_frame_2 - 0.35 11.1 4.1 0.34 11.2 1.0 2.1 1 1 1 2 2 2 0 TrkA-N domain RNA_pol_Rpb1_R PF05001.13 NODE_45969_length_424_cov_1.768638_g38169_i0forward_frame_3 - 3 8.4 19.6 45 4.7 0.3 6.2 5 0 0 5 5 5 0 RNA polymerase Rpb1 C-terminal repeat GtrA PF04138.14 NODE_45969_length_424_cov_1.768638_g38169_i0forward_frame_2 - 2.4 8.4 9.1 5.6 7.2 8.7 1.9 1 1 1 2 2 2 0 GtrA-like protein Metallophos PF00149.28 NODE_45968_length_424_cov_1.894602_g38168_i0reverse_frame_3 - 8.4e-05 23.2 0.4 9.8e-05 22.9 0.4 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PGK PF00162.19 NODE_45968_length_424_cov_1.894602_g38168_i0reverse_frame_3 - 1.5 7.7 3.7 6.4 5.6 0.6 2.0 2 0 0 2 2 2 0 Phosphoglycerate kinase GTSE1_N PF15259.6 NODE_45963_length_424_cov_2.460154_g38164_i0forward_frame_3 - 0.046 13.9 0.9 0.073 13.2 0.9 1.3 1 0 0 1 1 1 0 G-2 and S-phase expressed 1 DUF4663 PF15668.5 NODE_45961_length_424_cov_2.611825_g38162_i0reverse_frame_3 - 0.14 11.2 0.2 0.18 10.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4663) Macoilin PF09726.9 NODE_45953_length_424_cov_4.002571_g38154_i0reverse_frame_3 - 0.24 9.9 0.5 0.3 9.6 0.5 1.0 1 0 0 1 1 1 0 Macoilin family MORN PF02493.20 NODE_45953_length_424_cov_4.002571_g38154_i0forward_frame_3 - 2.2e-26 90.1 51.1 1.5e-06 27.7 1.2 7.1 7 0 0 7 7 7 7 MORN repeat EF-hand_7 PF13499.6 NODE_45951_length_424_cov_4.071979_g38152_i0reverse_frame_3 - 0.00024 21.5 0.0 0.00044 20.6 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_45951_length_424_cov_4.071979_g38152_i0reverse_frame_3 - 0.00056 19.6 0.0 0.37 10.9 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 NODE_45951_length_424_cov_4.071979_g38152_i0reverse_frame_3 - 0.002 17.5 0.1 0.019 14.5 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 NODE_45951_length_424_cov_4.071979_g38152_i0reverse_frame_3 - 0.11 12.0 0.2 0.46 10.1 0.0 2.1 2 0 0 2 2 2 0 EF hand AcetDehyd-dimer PF09290.11 NODE_45950_length_424_cov_4.113111_g38151_i0forward_frame_2 - 3.3e-59 199.0 0.8 3.6e-59 198.9 0.8 1.0 1 0 0 1 1 1 1 Prokaryotic acetaldehyde dehydrogenase, dimerisation Ank_3 PF13606.6 NODE_45949_length_424_cov_4.570694_g38150_i0forward_frame_2 - 1.9e-05 24.6 0.1 0.0038 17.6 0.0 2.6 3 0 0 3 3 3 1 Ankyrin repeat Ank_2 PF12796.7 NODE_45949_length_424_cov_4.570694_g38150_i0forward_frame_2 - 4.2e-05 24.0 0.0 6.2e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_45949_length_424_cov_4.570694_g38150_i0forward_frame_2 - 0.033 14.5 0.1 0.078 13.3 0.1 1.7 1 1 1 2 2 2 0 Ankyrin repeats (many copies) 7TM-7TMR_HD PF07698.11 NODE_45948_length_424_cov_5.056555_g38149_i0reverse_frame_3 - 0.13 12.0 0.5 0.17 11.6 0.5 1.1 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase DUF3667 PF12412.8 NODE_45947_length_424_cov_12.526992_g38148_i0reverse_frame_3 - 0.02 14.4 0.8 0.037 13.5 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) SVIP PF15811.5 NODE_45944_length_424_cov_45.609254_g38145_i0reverse_frame_3 - 0.069 13.6 1.6 0.069 13.6 1.6 2.1 2 0 0 2 2 2 0 Small VCP/p97-interacting protein RseA_C PF03873.13 NODE_45944_length_424_cov_45.609254_g38145_i0reverse_frame_3 - 0.075 13.3 0.8 0.29 11.4 0.8 2.0 1 1 0 1 1 1 0 Anti sigma-E protein RseA, C-terminal domain DUF5540 PF17694.1 NODE_45937_length_424_cov_87.485861_g38138_i0reverse_frame_3 - 0.053 14.0 1.2 0.072 13.6 1.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5540) SPATIAL PF15256.6 NODE_45936_length_424_cov_92.550129_g38137_i0reverse_frame_2 - 1.4 9.2 4.2 1.8 8.8 4.2 1.4 1 1 0 1 1 1 0 SPATIAL Rrn6 PF10214.9 NODE_45932_length_424_cov_112.290488_g38133_i0forward_frame_3 - 6.9 5.0 38.3 7.8 4.9 38.3 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor PI3K_1B_p101 PF10486.9 NODE_45932_length_424_cov_112.290488_g38133_i0forward_frame_3 - 7.4 4.2 22.3 8.6 4.0 22.3 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit Peroxin-3 PF04882.12 NODE_45932_length_424_cov_112.290488_g38133_i0forward_frame_3 - 9.9 5.0 21.9 13 4.6 21.9 1.1 1 0 0 1 1 1 0 Peroxin-3 GlpM PF06942.12 NODE_45929_length_424_cov_125.424165_g38130_i0forward_frame_3 - 0.39 11.1 10.6 2.6 8.5 6.8 2.3 1 1 1 2 2 2 0 GlpM protein MEDS PF14417.6 NODE_45926_length_424_cov_136.668380_g38127_i0forward_frame_2 - 0.069 13.0 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain FGF-BP1 PF06473.12 NODE_45924_length_424_cov_186.028278_g38125_i0forward_frame_2 - 0.045 13.6 0.0 0.066 13.0 0.0 1.2 1 0 0 1 1 1 0 FGF binding protein 1 (FGF-BP1) DUF3446 PF11928.8 NODE_45924_length_424_cov_186.028278_g38125_i0forward_frame_2 - 3.6 8.0 8.0 0.74 10.2 0.4 2.1 2 0 0 2 2 2 0 Early growth response N-terminal domain Reoviridae_Vp9 PF08978.10 NODE_45923_length_424_cov_193.961440_g38124_i0reverse_frame_3 - 0.025 13.8 0.1 0.033 13.4 0.1 1.1 1 0 0 1 1 1 0 Reoviridae VP9 Activin_recp PF01064.23 NODE_45923_length_424_cov_193.961440_g38124_i0forward_frame_2 - 0.28 12.3 3.1 0.52 11.4 3.1 1.5 1 1 0 1 1 1 0 Activin types I and II receptor domain Met_asp_mut_E PF06368.11 NODE_45920_length_424_cov_225.724936_g38121_i0reverse_frame_3 - 0.26 9.7 0.0 0.31 9.5 0.0 1.0 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) PAXX PF15384.6 NODE_45919_length_424_cov_243.974293_g2068_i1reverse_frame_3 - 0.051 13.3 0.0 0.077 12.7 0.0 1.3 1 0 0 1 1 1 0 PAXX, PAralog of XRCC4 and XLF, also called C9orf142 BBS2_N PF14781.6 NODE_45919_length_424_cov_243.974293_g2068_i1reverse_frame_3 - 0.085 12.8 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal CSN4_RPN5_eIF3a PF18420.1 NODE_45916_length_424_cov_617.218509_g38118_i0reverse_frame_2 - 0.037 14.2 0.0 0.067 13.4 0.0 1.4 1 0 0 1 1 1 0 CSN4/RPN5/eIF3a helix turn helix domain RNase_Zc3h12a PF11977.8 NODE_45908_length_425_cov_1.643590_g38112_i0reverse_frame_3 - 0.053 13.3 0.1 0.2 11.4 0.0 1.9 1 1 1 2 2 2 0 Zc3h12a-like Ribonuclease NYN domain DUF45 PF01863.17 NODE_45905_length_425_cov_2.020513_g38109_i0reverse_frame_2 - 0.91 9.5 12.5 1.1 9.2 12.5 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF45 DUF3090 PF11290.8 NODE_45905_length_425_cov_2.020513_g38109_i0reverse_frame_2 - 1.4 8.7 7.1 0.18 11.6 3.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3090) Nup88 PF10168.9 NODE_45905_length_425_cov_2.020513_g38109_i0reverse_frame_2 - 3.8 5.2 20.3 4.3 5.0 20.3 1.0 1 0 0 1 1 1 0 Nuclear pore component HU-CCDC81_bac_2 PF18175.1 NODE_45905_length_425_cov_2.020513_g38109_i0reverse_frame_2 - 4.9 7.1 12.5 1.1 9.2 0.8 2.8 1 1 2 3 3 3 0 CCDC81-like prokaryotic HU domain 2 DUF45 PF01863.17 NODE_45904_length_425_cov_2.123077_g38108_i0forward_frame_2 - 0.48 10.4 11.7 0.61 10.1 11.7 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF45 HU-CCDC81_bac_2 PF18175.1 NODE_45904_length_425_cov_2.123077_g38108_i0forward_frame_2 - 3.9 7.4 12.2 1 9.3 0.7 2.7 1 1 2 3 3 3 0 CCDC81-like prokaryotic HU domain 2 Nup88 PF10168.9 NODE_45904_length_425_cov_2.123077_g38108_i0forward_frame_2 - 6 4.5 20.3 7.2 4.3 20.3 1.0 1 0 0 1 1 1 0 Nuclear pore component ORC2 PF04084.14 NODE_45896_length_425_cov_2.617949_g38100_i0forward_frame_3 - 2.1e-19 69.6 0.6 2.5e-19 69.4 0.6 1.0 1 0 0 1 1 1 1 Origin recognition complex subunit 2 UPF0242 PF06785.11 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 6.1e-05 23.2 14.7 6.1e-05 23.2 14.7 1.9 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus Baculo_DNA_bind PF04786.12 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.0092 15.4 1.5 0.0092 15.4 1.5 1.4 2 0 0 2 2 2 1 ssDNA binding protein Peptidase_S41_N PF11918.8 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.075 13.3 4.1 0.13 12.4 4.1 1.3 1 0 0 1 1 1 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP DUF883 PF05957.13 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.4 11.3 3.1 1.8 9.2 0.0 2.6 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) Exonuc_VII_L PF02601.15 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.44 10.1 9.6 0.56 9.7 9.6 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4168 PF13767.6 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.72 11.1 9.1 0.39 11.9 2.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4168) Nup54 PF13874.6 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 2.7 8.1 12.7 9 6.4 6.3 2.2 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 ABC_membrane PF00664.23 NODE_45890_length_425_cov_2.956410_g38094_i0forward_frame_2 - 6e-05 22.8 3.8 7.2e-05 22.6 3.8 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region Longin PF13774.6 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.0011 19.0 0.1 0.47 10.5 0.0 2.3 2 0 0 2 2 2 2 Regulated-SNARE-like domain HR1 PF02185.16 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.027 14.6 3.7 0.18 11.9 1.1 2.8 1 1 1 2 2 2 0 Hr1 repeat Poty_PP PF08440.10 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.027 13.5 4.0 0.019 14.1 2.1 1.6 1 1 1 2 2 2 0 Potyviridae polyprotein FTO_CTD PF12934.7 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.034 13.9 0.7 0.31 10.8 0.2 1.9 1 1 1 2 2 2 0 FTO C-terminal domain DUF3837 PF12939.7 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.1 13.0 2.8 0.085 13.3 1.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) Phage_Mu_Gam PF07352.12 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.14 12.1 7.2 0.15 12.0 6.5 1.6 1 1 0 1 1 1 0 Bacteriophage Mu Gam like protein LOH1CR12 PF10158.9 NODE_45887_length_425_cov_3.261538_g38091_i0reverse_frame_2 - 0.00023 21.2 0.5 0.00029 20.8 0.5 1.1 1 0 0 1 1 1 1 Tumour suppressor protein Adeno_E3_15_3 PF03307.14 NODE_45887_length_425_cov_3.261538_g38091_i0reverse_frame_2 - 0.11 12.5 0.2 0.14 12.1 0.2 1.2 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region DUF3746 PF12562.8 NODE_45887_length_425_cov_3.261538_g38091_i0forward_frame_2 - 0.037 13.9 0.7 0.075 13.0 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3746) tRNA_anti-like PF12869.7 NODE_45885_length_425_cov_3.517949_g38089_i0reverse_frame_3 - 0.082 12.5 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 tRNA_anti-like PyrBI_leader PF08052.11 NODE_45883_length_425_cov_4.343590_g38087_i0reverse_frame_2 - 0.002 18.1 0.0 0.0067 16.4 0.0 1.8 2 0 0 2 2 2 1 PyrBI operon leader peptide NIR_SIR PF01077.22 NODE_45880_length_425_cov_20.541026_g38084_i0forward_frame_3 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NUMOD4 PF07463.11 NODE_45878_length_425_cov_38.743590_g38082_i0reverse_frame_3 - 0.068 13.4 0.5 0.12 12.6 0.5 1.4 1 0 0 1 1 1 0 NUMOD4 motif DUF1160 PF06648.11 NODE_45878_length_425_cov_38.743590_g38082_i0reverse_frame_2 - 0.0038 17.2 0.5 0.0087 16.1 0.2 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF1160) Prefoldin_3 PF13758.6 NODE_45878_length_425_cov_38.743590_g38082_i0reverse_frame_2 - 0.11 12.6 0.3 0.15 12.1 0.3 1.2 1 0 0 1 1 1 0 Prefoldin subunit Oxidored_nitro PF00148.19 NODE_45878_length_425_cov_38.743590_g38082_i0reverse_frame_2 - 0.17 10.6 0.1 0.22 10.2 0.1 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Rhabdo_NV PF02484.15 NODE_45877_length_425_cov_39.300000_g38081_i0forward_frame_3 - 0.014 15.5 0.1 0.041 14.0 0.0 1.8 1 1 1 2 2 2 0 Rhabdovirus Non-virion protein DUF1804 PF08822.11 NODE_45875_length_425_cov_53.797436_g38079_i0reverse_frame_2 - 0.12 12.3 0.7 8.9 6.3 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1804) O-antigen_lig PF13425.6 NODE_45869_length_425_cov_68.748718_g38073_i0forward_frame_2 - 0.093 11.5 5.2 0.11 11.3 5.2 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Cep57_MT_bd PF06657.13 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_3 - 0.00049 20.5 0.3 0.00089 19.7 0.3 1.5 1 0 0 1 1 1 1 Centrosome microtubule-binding domain of Cep57 OmdA PF13376.6 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_3 - 0.018 15.0 0.6 0.032 14.2 0.1 1.6 2 0 0 2 2 2 0 Bacteriocin-protection, YdeI or OmpD-Associated bZIP_1 PF00170.21 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_3 - 0.032 14.3 4.3 0.032 14.3 4.3 2.1 2 0 0 2 2 2 0 bZIP transcription factor DivIC PF04977.15 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_3 - 0.3 10.9 4.1 0.58 10.0 2.8 2.0 3 0 0 3 3 3 0 Septum formation initiator Erf4 PF10256.9 NODE_45867_length_425_cov_74.697436_g38071_i0forward_frame_2 - 0.057 13.5 0.5 0.079 13.1 0.5 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family FTA2 PF13095.6 NODE_45866_length_425_cov_75.717949_g38070_i0forward_frame_2 - 0.0096 15.6 0.1 0.012 15.2 0.1 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 PPR_2 PF13041.6 NODE_45860_length_425_cov_90.774359_g38064_i0reverse_frame_2 - 0.0033 17.6 0.0 0.018 15.3 0.0 1.9 2 0 0 2 2 2 1 PPR repeat family PPR PF01535.20 NODE_45860_length_425_cov_90.774359_g38064_i0reverse_frame_2 - 0.15 12.4 0.1 2.9 8.3 0.0 2.5 3 0 0 3 3 3 0 PPR repeat DUF4746 PF15928.5 NODE_45852_length_425_cov_151.320513_g38056_i0forward_frame_2 - 0.32 10.4 4.3 0.37 10.2 4.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) DUF4551 PF15087.6 NODE_45852_length_425_cov_151.320513_g38056_i0forward_frame_2 - 0.79 8.5 4.3 0.86 8.4 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) RseC_MucC PF04246.12 NODE_45849_length_425_cov_187.097436_g38053_i0forward_frame_2 - 0.15 12.0 0.3 0.48 10.4 0.1 1.8 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC NEMP PF10225.9 NODE_45849_length_425_cov_187.097436_g38053_i0forward_frame_2 - 0.17 11.5 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 NEMP family Spec3 PF15795.5 NODE_45842_length_425_cov_393.325641_g38047_i0reverse_frame_2 - 1.6e-08 34.9 20.5 1.1e-06 29.1 19.5 2.5 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein GFO_IDH_MocA_C PF02894.17 NODE_45835_length_426_cov_1.626598_g38041_i0forward_frame_2 - 0.2 11.7 1.2 0.26 11.3 0.4 1.5 2 0 0 2 2 2 0 Oxidoreductase family, C-terminal alpha/beta domain Helicase_RecD PF05127.14 NODE_45831_length_426_cov_2.207161_g38037_i0reverse_frame_2 - 1.2e-14 54.6 6.3 2.5e-07 30.7 1.4 2.2 1 1 1 2 2 2 2 Helicase AAA_30 PF13604.6 NODE_45831_length_426_cov_2.207161_g38037_i0reverse_frame_2 - 2.5e-05 24.1 0.9 3.6e-05 23.6 0.9 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_45831_length_426_cov_2.207161_g38037_i0reverse_frame_2 - 0.0046 17.4 0.0 0.0064 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 NODE_45831_length_426_cov_2.207161_g38037_i0reverse_frame_2 - 0.064 12.8 0.2 0.081 12.5 0.2 1.4 1 1 0 1 1 1 0 AAA domain DcuC PF03606.15 NODE_45824_length_426_cov_3.107417_g38030_i0forward_frame_3 - 1.1e-43 149.4 10.8 1.2e-43 149.3 10.8 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier RNase_T PF00929.24 NODE_45822_length_426_cov_3.301790_g38028_i0forward_frame_3 - 0.0098 16.4 0.0 0.018 15.6 0.0 1.5 1 1 0 1 1 1 1 Exonuclease QSregVF_b PF12843.7 NODE_45822_length_426_cov_3.301790_g38028_i0forward_frame_3 - 0.13 12.2 0.1 0.41 10.6 0.0 1.8 2 0 0 2 2 2 0 Putative quorum-sensing-regulated virulence factor Crystall_4 PF17945.1 NODE_45821_length_426_cov_3.693095_g38027_i0reverse_frame_3 - 0.076 13.5 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Beta/Gamma crystallin HlyIII PF03006.20 NODE_45818_length_426_cov_14.616368_g38024_i0forward_frame_3 - 2.9e-21 76.2 1.4 3.5e-21 76.0 1.4 1.0 1 0 0 1 1 1 1 Haemolysin-III related YrhK PF14145.6 NODE_45818_length_426_cov_14.616368_g38024_i0forward_frame_3 - 0.48 10.3 5.4 12 5.8 0.2 2.3 1 1 1 2 2 2 0 YrhK-like protein NIR_SIR PF01077.22 NODE_45817_length_426_cov_20.488491_g38023_i0reverse_frame_3 - 0.063 12.8 0.0 0.084 12.4 0.0 1.3 1 1 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain DD_K PF12121.8 NODE_45817_length_426_cov_20.488491_g38023_i0reverse_frame_2 - 0.18 11.9 5.7 4.9 7.4 0.4 2.4 2 0 0 2 2 2 0 Dermaseptin CytB6-F_Fe-S PF08802.10 NODE_45816_length_426_cov_26.173913_g38022_i0forward_frame_2 - 0.84 9.7 7.3 0.97 9.5 1.0 2.6 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit TMEM89 PF15098.6 NODE_45815_length_426_cov_27.616368_g38021_i0reverse_frame_2 - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 TMEM89 protein family 2OG-FeII_Oxy_2 PF13532.6 NODE_45815_length_426_cov_27.616368_g38021_i0forward_frame_3 - 2.9e-09 37.4 0.1 3.6e-09 37.1 0.1 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF2097 PF09870.9 NODE_45810_length_426_cov_50.580563_g38016_i0forward_frame_3 - 0.072 13.3 0.1 0.12 12.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2097) NOG1 PF06858.14 NODE_45806_length_426_cov_66.902813_g38012_i0reverse_frame_3 - 0.018 14.8 0.1 0.23 11.3 0.0 2.2 1 1 1 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) RVT_N PF13655.6 NODE_45806_length_426_cov_66.902813_g38012_i0reverse_frame_2 - 0.018 15.3 3.4 0.21 11.9 3.4 2.1 1 1 0 1 1 1 0 N-terminal domain of reverse transcriptase Spc7_C2 PF15577.6 NODE_45805_length_426_cov_69.424552_g38011_i0reverse_frame_3 - 0.031 14.3 0.1 0.072 13.2 0.1 1.6 1 0 0 1 1 1 0 Spc7_C2 DUF4201 PF13870.6 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 1.4e-25 90.0 20.6 1.8e-25 89.7 20.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) YkyA PF10368.9 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 0.01 15.5 15.7 0.018 14.7 15.7 1.3 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein AAA_13 PF13166.6 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 0.17 10.5 15.0 0.2 10.3 15.0 1.0 1 0 0 1 1 1 0 AAA domain TMPIT PF07851.13 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 0.33 10.1 8.3 0.38 9.9 8.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein DivIVA PF05103.13 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 0.7 10.0 13.7 0.4 10.8 8.5 2.4 2 1 0 2 2 2 0 DivIVA protein Atg14 PF10186.9 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 1.9 7.5 13.0 2.4 7.2 13.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ZapB PF06005.12 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 2.1 8.9 16.8 0.19 12.2 6.0 2.7 1 1 1 2 2 2 0 Cell division protein ZapB Exonuc_VII_L PF02601.15 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 3.3 7.2 8.0 4.1 6.9 8.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF5341 PF17276.2 NODE_45801_length_426_cov_74.255754_g38007_i0reverse_frame_3 - 0.062 13.5 0.3 0.1 12.8 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5341) YIF1 PF03878.15 NODE_45801_length_426_cov_74.255754_g38007_i0forward_frame_3 - 0.059 12.9 1.7 0.066 12.7 1.7 1.2 1 0 0 1 1 1 0 YIF1 Ank_5 PF13857.6 NODE_45793_length_426_cov_92.726343_g37999_i0reverse_frame_2 - 4.7e-13 49.1 0.0 1.4e-08 34.9 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_45793_length_426_cov_92.726343_g37999_i0reverse_frame_2 - 5.8e-07 30.0 0.0 0.0006 20.3 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_45793_length_426_cov_92.726343_g37999_i0reverse_frame_2 - 1.8e-06 27.8 0.0 0.00021 21.5 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_45793_length_426_cov_92.726343_g37999_i0reverse_frame_2 - 2e-06 28.2 0.0 7.2e-06 26.5 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_45793_length_426_cov_92.726343_g37999_i0reverse_frame_2 - 1.7e-05 25.1 0.0 0.013 15.9 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat INTAP PF16617.5 NODE_45791_length_426_cov_103.010230_g37997_i0reverse_frame_3 - 0.38 11.1 13.0 0.5 10.7 13.0 1.1 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region Histone_HNS PF00816.21 NODE_45791_length_426_cov_103.010230_g37997_i0forward_frame_3 - 0.0032 18.2 3.0 0.0032 18.2 3.0 1.8 2 0 0 2 2 2 1 H-NS histone family RCC1_2 PF13540.6 NODE_45790_length_426_cov_113.097187_g37996_i0forward_frame_2 - 0.0022 17.8 6.0 0.13 12.1 0.2 3.2 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_45790_length_426_cov_113.097187_g37996_i0forward_frame_2 - 0.027 14.6 0.2 27 4.8 0.0 3.0 2 1 1 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Urocanase_C PF17392.2 NODE_45790_length_426_cov_113.097187_g37996_i0forward_frame_2 - 0.23 10.9 4.4 0.28 10.6 1.5 2.0 1 1 1 2 2 2 0 Urocanase C-terminal domain RCC1_2 PF13540.6 NODE_45789_length_426_cov_113.199488_g37995_i0forward_frame_2 - 0.0021 17.8 6.0 0.13 12.1 0.2 3.3 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_45789_length_426_cov_113.199488_g37995_i0forward_frame_2 - 0.027 14.6 0.2 27 4.8 0.0 3.0 2 1 1 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Urocanase_C PF17392.2 NODE_45789_length_426_cov_113.199488_g37995_i0forward_frame_2 - 0.23 10.9 4.4 0.28 10.6 1.5 2.0 1 1 1 2 2 2 0 Urocanase C-terminal domain DUF2431 PF10354.9 NODE_45786_length_426_cov_124.774936_g37992_i0reverse_frame_3 - 4.5e-10 40.0 0.0 5.6e-10 39.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Ctr PF04145.15 NODE_45778_length_426_cov_164.641944_g37984_i0forward_frame_3 - 0.14 12.8 0.1 0.18 12.4 0.1 1.2 1 0 0 1 1 1 0 Ctr copper transporter family ACP_syn_III PF08545.10 NODE_45778_length_426_cov_164.641944_g37984_i0forward_frame_3 - 1.2 9.1 3.4 1.9 8.4 0.8 2.1 1 1 1 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DUF4083 PF13314.6 NODE_45778_length_426_cov_164.641944_g37984_i0forward_frame_2 - 1.2 9.1 2.8 1.9 8.5 2.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Spec3 PF15795.5 NODE_45768_length_426_cov_794.516624_g37975_i0reverse_frame_3 - 5.1e-12 46.2 15.9 6.8e-10 39.4 15.9 2.2 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein UvrD-helicase PF00580.21 NODE_45768_length_426_cov_794.516624_g37975_i0forward_frame_3 - 0.12 11.9 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain Ribosomal_S27e PF01667.17 NODE_45766_length_426_cov_1374.038363_g37973_i0reverse_frame_2 - 2.8e-05 23.7 1.2 9.4e-05 22.0 0.0 2.2 2 1 0 2 2 2 1 Ribosomal protein S27 Spec3 PF15795.5 NODE_45765_length_426_cov_1535.301790_g37972_i0forward_frame_2 - 3.2e-10 40.4 12.9 7.4e-08 32.8 12.9 2.4 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein Hypoth_Ymh PF09509.10 ORF99682 - 0.028 14.3 0.0 0.043 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) DUF2390 PF09523.10 ORF99682 - 0.087 13.1 1.7 0.12 12.7 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2390) RsbRD_N PF14361.6 ORF99682 - 0.36 11.5 2.0 0.65 10.7 2.0 1.5 1 1 0 1 1 1 0 RsbT co-antagonist protein rsbRD N-terminal domain PCI PF01399.27 ORF99646 - 1e-14 54.9 0.1 1.4e-14 54.5 0.1 1.2 1 0 0 1 1 1 1 PCI domain CSN4_RPN5_eIF3a PF18420.1 ORF99646 - 0.00022 21.3 0.8 0.00059 20.0 0.1 2.1 2 0 0 2 2 2 1 CSN4/RPN5/eIF3a helix turn helix domain HTH_Crp_2 PF13545.6 ORF99646 - 0.021 14.8 0.1 0.24 11.4 0.0 2.3 2 1 1 3 3 3 0 Crp-like helix-turn-helix domain DUF4548 PF15081.6 ORF99646 - 0.041 13.7 0.0 0.05 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4548) PUL PF08324.11 ORF98551 - 2.3e-17 63.2 0.0 2.5e-17 63.0 0.0 1.0 1 0 0 1 1 1 1 PUL domain DUF2408 PF10303.9 ORF97792 - 0.59 10.7 9.1 0.77 10.3 9.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) CENP-H PF05837.12 ORF97792 - 3.3 8.2 8.8 1.1 9.7 4.2 2.0 2 0 0 2 2 2 0 Centromere protein H (CENP-H) DUF2408 PF10303.9 ORF97088 - 0.59 10.7 9.1 0.77 10.3 9.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) CENP-H PF05837.12 ORF97088 - 3.3 8.2 8.8 1.1 9.7 4.2 2.0 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Sulfotransfer_1 PF00685.27 ORF96991 - 0.084 12.3 0.3 0.11 12.0 0.3 1.1 1 0 0 1 1 1 0 Sulfotransferase domain Ferlin_C PF16165.5 ORF96991 - 0.42 10.6 2.3 0.26 11.2 0.6 1.6 1 1 1 2 2 2 0 Ferlin C-terminus TPR_1 PF00515.28 ORF96544 - 0.11 12.3 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Pkinase PF00069.25 ORF95973 - 2.1e-46 158.5 0.1 2.3e-46 158.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95973 - 1.6e-25 89.9 0.0 1.7e-25 89.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF95973 - 1.6e-07 30.6 0.1 1.9e-07 30.4 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF95973 - 0.00031 20.4 0.2 0.00036 20.2 0.2 1.1 1 0 0 1 1 1 1 RIO1 family Rax2 PF12768.7 ORF95973 - 0.0017 17.8 0.0 0.0024 17.4 0.0 1.1 1 0 0 1 1 1 1 Cortical protein marker for cell polarity Pox_ser-thr_kin PF05445.11 ORF95973 - 0.0078 15.2 0.7 0.013 14.5 0.2 1.5 1 1 0 1 1 1 1 Poxvirus serine/threonine protein kinase Kinase-like PF14531.6 ORF95973 - 0.041 13.2 0.0 0.045 13.1 0.0 1.1 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF95973 - 0.12 12.2 0.0 0.24 11.3 0.0 1.4 1 1 1 2 2 2 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF95973 - 0.18 11.3 1.9 0.31 10.6 0.1 1.8 1 1 1 2 2 2 0 Choline/ethanolamine kinase DUF1904 PF08921.11 ORF95939 - 0.073 13.4 0.2 0.13 12.6 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1904) DUF498 PF04430.14 ORF95614 - 5.7e-21 74.6 0.0 7.8e-21 74.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) adh_short PF00106.25 ORF95053 - 1.4e-14 54.0 0.0 1.6e-14 53.8 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF95053 - 6.5e-07 29.1 0.0 8e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF95053 - 0.00045 20.2 0.0 0.00053 19.9 0.0 1.1 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF95053 - 0.02 14.8 0.0 0.024 14.5 0.0 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sigma70_r1_1 PF03979.14 ORF95053 - 0.098 12.7 0.5 0.19 11.8 0.4 1.6 1 1 0 1 1 1 0 Sigma-70 factor, region 1.1 SPOUT_MTase PF02590.17 ORF95053 - 0.11 12.4 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Predicted SPOUT methyltransferase NCA2 PF08637.10 ORF94876 - 1.8e-06 27.4 0.0 2.2e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 ATP synthase regulation protein NCA2 Aldo_ket_red PF00248.21 ORF93462 - 2.3e-25 89.4 0.1 2.5e-25 89.3 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF2660 PF10859.8 ORF93462 - 0.13 12.8 0.0 0.28 11.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2660) BLYB PF05289.11 ORF93416 - 0.014 15.6 0.3 0.027 14.7 0.0 1.6 2 0 0 2 2 2 0 Borrelia hemolysin accessory protein DUF4604 PF15377.6 ORF92731 - 0.027 14.9 13.7 0.035 14.5 13.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) CDC45 PF02724.14 ORF92731 - 0.031 12.6 2.0 0.032 12.6 2.0 1.0 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF92731 - 0.083 11.0 7.6 0.1 10.7 7.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi Presenilin PF01080.17 ORF92731 - 0.12 11.2 2.7 0.13 11.0 2.7 1.2 1 0 0 1 1 1 0 Presenilin TFIIF_alpha PF05793.12 ORF92731 - 0.15 10.6 16.0 0.18 10.3 16.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) NPR3 PF03666.13 ORF92731 - 0.17 10.6 3.6 0.2 10.4 3.6 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 SR-25 PF10500.9 ORF92731 - 0.25 10.9 18.0 0.3 10.6 18.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF936 PF06075.12 ORF92731 - 1.6 7.6 10.2 1.7 7.5 10.2 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) DUF3827 PF12877.7 ORF92731 - 5.4 5.3 9.9 6.5 5.0 9.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) CCDC106 PF15794.5 ORF92731 - 8.4 6.0 16.1 11 5.6 16.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Pkinase PF00069.25 ORF92399 - 2.8e-24 85.9 0.4 3.2e-24 85.7 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92399 - 5.3e-09 35.7 0.1 6.2e-09 35.5 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase zf-C3HC4_3 PF13920.6 ORF92048 - 7.8e-09 35.3 11.4 1.1e-08 34.7 11.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF92048 - 4.3e-08 32.9 11.7 6.7e-08 32.3 11.7 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF92048 - 4.7e-06 26.8 9.1 7.1e-06 26.3 9.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF92048 - 7.1e-06 25.8 7.2 1.3e-05 25.0 7.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF92048 - 1.2e-05 25.2 10.8 6.3e-05 22.9 11.3 1.9 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF92048 - 3.4e-05 23.6 9.1 5.3e-05 23.0 9.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF92048 - 0.00023 21.1 2.4 0.00023 21.1 2.4 2.0 1 1 0 1 1 1 1 RING-type zinc-finger RecR PF02132.15 ORF92048 - 0.024 14.2 3.0 2 8.1 0.5 2.4 2 0 0 2 2 2 0 RecR protein TerY_C PF15616.6 ORF92048 - 0.025 14.7 3.4 0.03 14.4 3.4 1.2 1 0 0 1 1 1 0 TerY-C metal binding domain zf-RING_4 PF14570.6 ORF92048 - 0.1 12.4 6.0 0.19 11.6 6.0 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_6 PF14835.6 ORF92048 - 0.26 11.2 11.6 0.093 12.6 8.8 1.6 2 0 0 2 2 2 0 zf-RING of BARD1-type protein zf-C2HC5 PF06221.13 ORF92048 - 0.39 10.7 8.2 0.14 12.2 5.0 1.8 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type Zn_Tnp_IS91 PF14319.6 ORF92048 - 0.78 9.8 7.7 1.7 8.7 7.2 1.7 1 1 0 1 1 1 0 Transposase zinc-binding domain Rtf2 PF04641.12 ORF92048 - 1.3 8.3 7.5 2 7.7 7.5 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger Ribonuc_L-PSP PF01042.21 ORF91956 - 2.8e-45 153.2 0.9 3.2e-45 153.0 0.9 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP YjgF_endoribonc PF14588.6 ORF91956 - 0.085 13.0 0.1 0.16 12.1 0.1 1.5 1 1 0 1 1 1 0 YjgF/chorismate_mutase-like, putative endoribonuclease BC10 PF06726.12 ORF9143 - 0.091 13.0 0.5 0.17 12.1 0.5 1.4 1 0 0 1 1 1 0 Bladder cancer-related protein BC10 GSH_synth_ATP PF03917.17 ORF90698 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Ctr PF04145.15 ORF89987 - 2.6e-10 41.1 10.3 2.4e-06 28.2 3.8 2.1 1 1 1 2 2 2 2 Ctr copper transporter family S1FA PF04689.13 ORF89987 - 0.13 12.5 1.8 0.45 10.7 0.1 2.2 2 0 0 2 2 2 0 DNA binding protein S1FA Hypoth_Ymh PF09509.10 ORF89692 - 0.028 14.3 0.0 0.043 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) DUF2390 PF09523.10 ORF89692 - 0.087 13.1 1.7 0.12 12.7 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2390) RsbRD_N PF14361.6 ORF89692 - 0.36 11.5 2.0 0.65 10.7 2.0 1.5 1 1 0 1 1 1 0 RsbT co-antagonist protein rsbRD N-terminal domain Mito_carr PF00153.27 ORF88648 - 5.8e-31 106.3 0.1 1.1e-15 57.3 0.0 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF4372 PF14294.6 ORF88648 - 0.073 13.2 0.3 5.9 7.1 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4372) TRCF PF03461.15 ORF88103 - 7.6e-30 103.1 0.0 2.8e-29 101.3 0.0 1.7 2 0 0 2 2 2 1 TRCF domain OB_NTP_bind PF07717.16 ORF88032 - 3.5e-18 65.7 0.0 4.8e-18 65.3 0.0 1.2 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold VASt PF16016.5 ORF859 - 1.3e-12 48.4 0.0 1.5e-12 48.2 0.0 1.0 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain Profilin PF00235.19 ORF85897 - 1.2e-14 54.6 0.1 1.3e-14 54.5 0.1 1.1 1 0 0 1 1 1 1 Profilin Ricin_B_lectin PF00652.22 ORF8569 - 4.5e-11 43.1 2.1 7e-11 42.5 2.1 1.3 1 1 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF8569 - 5.6e-05 23.8 0.0 0.00013 22.6 0.0 1.6 2 0 0 2 2 2 1 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 ORF8569 - 0.035 13.7 0.2 0.062 12.9 0.2 1.5 1 1 0 1 1 1 0 Cytolethal distending toxin A/C domain zf-met PF12874.7 ORF85634 - 0.087 13.2 4.1 0.1 13.0 0.5 2.5 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Myc_target_1 PF15179.6 ORF85634 - 0.15 12.0 9.4 0.21 11.5 9.4 1.3 1 0 0 1 1 1 0 Myc target protein 1 Conotoxin PF02950.17 ORF85634 - 7.4 7.7 6.6 0.8 10.8 1.7 1.9 2 0 0 2 2 2 0 Conotoxin Acetyltransf_1 PF00583.25 ORF85473 - 1.7e-19 70.2 0.0 2.2e-19 69.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF85473 - 1.5e-12 47.7 0.1 2.7e-12 47.0 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF85473 - 3.9e-12 46.2 0.0 5.3e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF85473 - 3.3e-08 33.7 0.0 1.6e-06 28.2 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF85473 - 8.2e-08 32.1 0.0 1.1e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.7 ORF85473 - 1.1e-06 28.9 0.1 1.5e-06 28.4 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF85473 - 0.0027 17.4 0.0 0.0043 16.7 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF85473 - 0.0027 18.4 0.0 0.0034 18.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 ORF85473 - 0.0031 17.2 0.0 0.0038 17.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_4 PF13420.7 ORF85473 - 0.007 16.5 0.0 0.014 15.5 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF85473 - 0.019 15.1 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 ORF85473 - 0.03 13.8 0.0 0.037 13.5 0.0 1.3 1 0 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_13 PF13880.6 ORF85473 - 0.064 13.2 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase ExbD PF02472.16 ORF84017 - 8.6e-31 106.8 0.5 9.6e-31 106.7 0.5 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR NETI PF14044.6 ORF84017 - 0.17 11.7 0.1 12 5.7 0.0 2.3 2 0 0 2 2 2 0 NETI protein DUF4252 PF14060.6 ORF83362 - 0.3 11.0 3.9 0.41 10.5 3.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) Pkinase PF00069.25 ORF83269 - 2.8e-24 85.9 0.4 3.2e-24 85.7 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83269 - 5.3e-09 35.7 0.1 6.2e-09 35.5 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EMP70 PF02990.16 ORF82474 - 0.055 12.1 0.1 0.067 11.8 0.1 1.1 1 0 0 1 1 1 0 Endomembrane protein 70 ATP-synt_Eps PF04627.13 ORF82474 - 0.13 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial ATP synthase epsilon chain FAM183 PF14886.6 ORF810 - 0.0093 16.7 0.1 0.013 16.2 0.1 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks160.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks160.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks160.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks160.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GATA PF00320.27 ORF79951 - 1.3 8.7 5.1 1.5 8.5 0.2 2.8 3 0 0 3 3 3 0 GATA zinc finger DUF3450 PF11932.8 ORF79290 - 0.0031 16.8 0.2 0.0038 16.6 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) DUF1664 PF07889.12 ORF79290 - 0.02 14.9 0.2 0.034 14.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Fzo_mitofusin PF04799.13 ORF79290 - 0.038 13.6 0.1 0.057 13.0 0.1 1.3 1 0 0 1 1 1 0 fzo-like conserved region TMPIT PF07851.13 ORF79290 - 0.064 12.5 5.2 0.014 14.7 1.9 1.5 2 0 0 2 2 2 0 TMPIT-like protein UPF0242 PF06785.11 ORF79290 - 0.075 13.1 4.7 0.09 12.9 4.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2428 PF10350.9 ORF79290 - 0.098 11.9 1.0 0.12 11.6 1.0 1.1 1 0 0 1 1 1 0 Putative death-receptor fusion protein (DUF2428) Lectin_N PF03954.14 ORF79290 - 0.32 10.8 2.4 0.32 10.8 0.5 1.8 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain DUF5082 PF16888.5 ORF79290 - 0.65 10.3 9.2 1.2 9.4 9.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) LMBR1 PF04791.16 ORF78395 - 2.8 6.7 4.3 3.3 6.5 4.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein MIG-14_Wnt-bd PF06664.12 ORF78257 - 0.52 9.5 2.0 0.67 9.1 2.0 1.1 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion Cwf_Cwc_15 PF04889.12 ORF78257 - 1.5 8.5 19.0 1.8 8.3 19.0 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Cytomega_UL84 PF06284.11 ORF78257 - 1.8 7.0 3.7 2 6.8 3.7 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Presenilin PF01080.17 ORF78257 - 2.4 6.8 4.6 2.6 6.7 4.6 1.1 1 0 0 1 1 1 0 Presenilin NOA36 PF06524.12 ORF78257 - 5.4 6.2 13.0 6.8 5.9 13.0 1.2 1 0 0 1 1 1 0 NOA36 protein ZapA PF05164.13 ORF7780 - 0.033 14.6 0.2 0.32 11.5 0.1 2.1 2 0 0 2 2 2 0 Cell division protein ZapA Fungal_TACC PF12709.7 ORF7780 - 0.059 13.8 0.7 0.059 13.8 0.7 2.5 3 0 0 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins Phage_tail_NK PF16532.5 ORF7780 - 0.088 12.4 0.2 0.33 10.6 0.1 1.7 1 1 1 2 2 2 0 Sf6-type phage tail needle knob or tip of some Caudovirales LSM PF01423.22 ORF7780 - 0.2 11.4 1.8 0.28 10.9 0.1 2.1 2 0 0 2 2 2 0 LSM domain Endonuclease_5 PF04493.14 ORF76874 - 3e-23 82.5 0.1 6.7e-23 81.4 0.0 1.5 2 0 0 2 2 2 1 Endonuclease V DUF99 PF01949.16 ORF76874 - 0.00092 18.7 0.0 0.0014 18.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF99 DUF5093 PF17011.5 ORF76874 - 0.005 17.1 0.8 0.0068 16.7 0.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5093) RRP7 PF12923.7 ORF76874 - 0.0052 16.9 1.0 0.0073 16.4 1.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain DUF755 PF05501.11 ORF76874 - 0.055 13.8 2.4 0.09 13.1 2.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Pkinase PF00069.25 ORF76851 - 2.1e-46 158.5 0.1 2.3e-46 158.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF76851 - 1.6e-25 89.9 0.0 1.7e-25 89.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF76851 - 1.6e-07 30.6 0.1 1.9e-07 30.4 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF76851 - 0.00031 20.4 0.2 0.00036 20.2 0.2 1.1 1 0 0 1 1 1 1 RIO1 family Rax2 PF12768.7 ORF76851 - 0.0017 17.8 0.0 0.0024 17.4 0.0 1.1 1 0 0 1 1 1 1 Cortical protein marker for cell polarity Pox_ser-thr_kin PF05445.11 ORF76851 - 0.0078 15.2 0.7 0.013 14.5 0.2 1.5 1 1 0 1 1 1 1 Poxvirus serine/threonine protein kinase Kinase-like PF14531.6 ORF76851 - 0.041 13.2 0.0 0.045 13.1 0.0 1.1 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF76851 - 0.12 12.2 0.0 0.24 11.3 0.0 1.4 1 1 1 2 2 2 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF76851 - 0.18 11.3 1.9 0.31 10.6 0.1 1.8 1 1 1 2 2 2 0 Choline/ethanolamine kinase AAA PF00004.29 ORF76684 - 3.8e-22 79.1 0.0 6.1e-22 78.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 ORF76684 - 0.0055 16.8 0.0 0.0085 16.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) DUF2028 PF09667.10 ORF76684 - 0.17 11.9 0.1 0.32 10.9 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF2028) DUF1583 PF07622.11 ORF76683 - 0.18 10.5 0.0 0.22 10.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1583) CENP-F_leu_zip PF10473.9 ORF76601 - 0.0061 16.6 0.6 0.0076 16.3 0.6 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1043 PF06295.12 ORF76601 - 0.015 15.3 1.2 0.023 14.7 1.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) CdiI PF07262.11 ORF76601 - 0.017 14.9 1.3 0.023 14.5 1.3 1.3 1 0 0 1 1 1 0 CDI immunity protein Med4 PF10018.9 ORF76601 - 0.035 13.8 0.8 0.045 13.4 0.8 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Patatin PF01734.22 ORF75455 - 0.012 15.8 0.1 0.016 15.4 0.1 1.2 1 0 0 1 1 1 0 Patatin-like phospholipase DUF3734 PF12536.8 ORF75455 - 0.22 11.8 0.0 0.38 11.1 0.0 1.3 1 0 0 1 1 1 0 Patatin phospholipase HD_4 PF13328.6 ORF74932 - 0.0039 16.9 0.0 0.0082 15.9 0.0 1.6 1 1 0 1 1 1 1 HD domain SAM_adeno_trans PF01887.16 ORF74772 - 0.089 12.2 0.0 0.093 12.2 0.0 1.2 1 0 0 1 1 1 0 S-adenosyl-l-methionine hydroxide adenosyltransferase Imm58 PF15581.6 ORF74298 - 0.071 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 58 OB_RNB PF08206.11 ORF74095 - 0.11 12.2 0.2 4.4 7.1 0.0 2.2 2 0 0 2 2 2 0 Ribonuclease B OB domain DUF4365 PF14280.6 ORF74095 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4365) GSH_synth_ATP PF03917.17 ORF74034 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain KLRAQ PF10205.9 ORF7391 - 0.00041 20.5 1.7 0.00041 20.5 1.7 1.6 2 0 0 2 2 2 1 Predicted coiled-coil domain-containing protein Fungal_TACC PF12709.7 ORF7391 - 0.031 14.7 3.4 0.042 14.3 0.6 2.3 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF1515 PF07439.11 ORF7391 - 0.12 12.5 0.7 0.18 11.9 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1515) DUF948 PF06103.11 ORF7391 - 0.36 11.1 2.7 15 5.9 0.7 2.3 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) zf-C4H2 PF10146.9 ORF7391 - 0.99 9.7 6.4 0.72 10.1 1.9 1.9 1 1 1 2 2 2 0 Zinc finger-containing protein TACC_C PF05010.14 ORF7391 - 1.1 9.0 9.3 0.68 9.7 4.1 2.0 2 0 0 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Uso1_p115_C PF04871.13 ORF7391 - 1.3 9.4 5.9 0.52 10.7 2.1 1.9 1 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Csm2_III-A PF03750.13 ORF7391 - 1.5 9.7 7.6 3.1 8.7 2.9 2.2 1 1 1 2 2 2 0 Csm2 Type III-A adh_short PF00106.25 ORF73261 - 1.4e-14 54.0 0.0 1.6e-14 53.8 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF73261 - 6.5e-07 29.1 0.0 8e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF73261 - 0.00045 20.2 0.0 0.00053 19.9 0.0 1.1 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF73261 - 0.02 14.8 0.0 0.024 14.5 0.0 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sigma70_r1_1 PF03979.14 ORF73261 - 0.098 12.7 0.5 0.19 11.8 0.4 1.6 1 1 0 1 1 1 0 Sigma-70 factor, region 1.1 SPOUT_MTase PF02590.17 ORF73261 - 0.11 12.4 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Predicted SPOUT methyltransferase Edc3_linker PF16598.5 ORF72285 - 0.3 11.8 7.8 0.099 13.3 4.8 1.8 1 1 1 2 2 2 0 Linker region of enhancer of mRNA-decapping protein 3 PDDEXK_6 PF04720.12 ORF71782 - 0.047 13.6 0.2 0.065 13.2 0.2 1.2 1 0 0 1 1 1 0 PDDEXK-like family of unknown function FYVE_2 PF02318.16 ORF70788 - 0.0043 17.3 0.2 0.0066 16.7 0.1 1.3 1 1 0 1 1 1 1 FYVE-type zinc finger zf-ribbon_3 PF13248.6 ORF70788 - 0.048 13.1 1.5 3 7.4 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-FCS PF06467.14 ORF70788 - 2.9 7.9 6.6 13 5.8 0.8 2.4 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif DUF3306 PF11748.8 ORF69589 - 9.8 7.1 8.7 2.9 8.8 4.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3306) BLYB PF05289.11 ORF69172 - 0.014 15.6 0.3 0.027 14.7 0.0 1.6 2 0 0 2 2 2 0 Borrelia hemolysin accessory protein Viral_env_E26 PF11050.8 ORF68979 - 0.037 13.4 4.0 0.041 13.2 4.0 1.2 1 0 0 1 1 1 0 Virus envelope protein E26 Allexi_40kDa PF05549.11 ORF68979 - 0.21 11.1 3.9 0.16 11.4 2.7 1.5 1 1 1 2 2 2 0 Allexivirus 40kDa protein SirA PF10747.9 ORF68979 - 0.26 11.6 5.5 0.31 11.3 4.6 1.7 1 1 0 1 1 1 0 Sporulation inhibitor of replication protein SirA RVT_3 PF13456.6 ORF68772 - 0.015 15.1 0.1 0.095 12.5 0.0 2.0 1 1 1 2 2 2 0 Reverse transcriptase-like GSH_synth_ATP PF03917.17 ORF68031 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synth_ATP PF03917.17 ORF67003 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Se-cys_synth_N PF12390.8 ORF66781 - 0.059 13.6 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Selenocysteine synthase N terminal CaKB PF03185.15 ORF66781 - 0.11 12.2 0.9 0.14 11.8 0.9 1.1 1 0 0 1 1 1 0 Calcium-activated potassium channel, beta subunit EamA PF00892.20 ORF66487 - 1.6e-05 25.1 7.0 2.1e-05 24.7 7.0 1.1 1 0 0 1 1 1 1 EamA-like transporter family DUF4807 PF16065.5 ORF66487 - 0.029 14.0 0.1 0.042 13.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4807) EF-hand_1 PF00036.32 ORF66026 - 5.2e-05 22.5 0.0 9.6e-05 21.7 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF66026 - 0.00031 21.1 0.0 0.00049 20.5 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF66026 - 0.0031 17.3 0.0 0.0075 16.1 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF66026 - 0.0066 15.9 0.0 0.012 15.0 0.0 1.4 1 0 0 1 1 1 1 EF hand SPARC_Ca_bdg PF10591.9 ORF66026 - 0.031 14.6 0.1 0.53 10.6 0.0 2.3 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Pes-10 PF07149.11 ORF66026 - 0.048 12.7 1.1 0.053 12.6 1.1 1.0 1 0 0 1 1 1 0 Pes-10 EF-hand_8 PF13833.6 ORF66026 - 0.1 12.5 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain pair CSG2 PF16965.5 ORF65764 - 0.0069 15.4 1.3 0.0079 15.2 1.3 1.1 1 0 0 1 1 1 1 Ceramide synthase regulator PBP1_TM PF14812.6 ORF65764 - 0.028 14.8 4.0 0.028 14.8 4.0 1.7 1 1 1 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal TRAP-gamma PF07074.12 ORF65764 - 0.03 13.9 4.0 0.022 14.3 2.3 1.6 1 1 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) cNMP_binding PF00027.29 ORF65735 - 3.5e-05 23.8 0.0 0.00026 21.0 0.0 2.1 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain zf_CopZ PF18423.1 ORF65735 - 0.17 11.9 0.5 0.17 11.9 0.5 1.7 2 0 0 2 2 2 0 Zinc binding domain GSH_synth_ATP PF03917.17 ORF65713 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Fungal_TACC PF12709.7 ORF65137 - 0.0078 16.6 0.9 0.0078 16.6 0.9 2.2 2 0 0 2 2 2 1 Fungal Transforming acidic coiled-coil (TACC) proteins KLRAQ PF10205.9 ORF65137 - 0.018 15.2 1.1 0.018 15.2 1.1 1.6 2 0 0 2 2 2 0 Predicted coiled-coil domain-containing protein Ferritin-like PF12902.7 ORF65137 - 0.024 14.5 1.5 0.03 14.2 0.8 1.5 1 1 1 2 2 2 0 Ferritin-like FNIP_M PF14637.6 ORF65137 - 0.11 12.5 2.6 0.17 11.9 2.2 1.4 1 1 0 1 1 1 0 Folliculin-interacting protein middle domain DUF948 PF06103.11 ORF65137 - 0.12 12.7 2.1 4.9 7.5 0.3 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) TBCA PF02970.16 ORF65137 - 0.17 12.3 3.5 2.7 8.4 0.2 2.7 2 1 1 3 3 3 0 Tubulin binding cofactor A Fib_alpha PF08702.10 ORF65137 - 0.23 11.6 7.5 0.079 13.1 3.5 1.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family zf-C4H2 PF10146.9 ORF65137 - 0.54 10.5 5.0 0.64 10.3 1.1 2.0 1 1 1 2 2 2 0 Zinc finger-containing protein LMP PF04778.12 ORF65137 - 4.1 7.3 15.6 1.7 8.5 7.0 2.1 1 1 1 2 2 2 0 LMP repeated region GSH_synth_ATP PF03917.17 ORF6463 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain HCV_NS5a_1a PF08300.13 ORF63113 - 0.24 11.6 0.1 0.24 11.6 0.1 2.1 2 1 1 3 3 3 0 Hepatitis C virus non-structural 5a zinc finger domain START PF01852.19 ORF61363 - 1.4e-08 34.4 0.0 1.8e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 START domain TRAM_LAG1_CLN8 PF03798.16 ORF6128 - 0.00011 22.1 1.9 0.00013 21.8 1.9 1.1 1 0 0 1 1 1 1 TLC domain adh_short PF00106.25 ORF60418 - 1.4e-14 54.0 0.0 1.6e-14 53.8 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF60418 - 6.5e-07 29.1 0.0 8e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF60418 - 0.00045 20.2 0.0 0.00053 19.9 0.0 1.1 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF60418 - 0.02 14.8 0.0 0.024 14.5 0.0 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sigma70_r1_1 PF03979.14 ORF60418 - 0.098 12.7 0.5 0.19 11.8 0.4 1.6 1 1 0 1 1 1 0 Sigma-70 factor, region 1.1 SPOUT_MTase PF02590.17 ORF60418 - 0.11 12.4 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Predicted SPOUT methyltransferase Peptidase_M17 PF00883.21 ORF60414 - 6.5e-27 94.6 0.0 7.2e-27 94.5 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Pyridoxal_deC PF00282.19 ORF59898 - 0.00041 19.2 0.0 0.00056 18.7 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Me-amine-dh_H PF06433.11 ORF59898 - 0.064 12.1 0.0 0.092 11.6 0.0 1.2 1 0 0 1 1 1 0 Methylamine dehydrogenase heavy chain (MADH) Podoplanin PF05808.11 ORF56632 - 6.3e-07 29.6 1.5 6.9e-07 29.5 1.5 1.1 1 0 0 1 1 1 1 Podoplanin Shisa PF13908.6 ORF56632 - 0.027 14.7 3.5 0.035 14.4 3.5 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Rax2 PF12768.7 ORF56632 - 0.16 11.4 1.1 0.28 10.6 1.1 1.5 1 1 1 2 2 2 0 Cortical protein marker for cell polarity Mid2 PF04478.12 ORF56632 - 0.35 10.7 4.8 0.24 11.2 3.2 1.5 2 0 0 2 2 2 0 Mid2 like cell wall stress sensor SIT PF15330.6 ORF5654 - 0.0095 16.4 0.0 0.016 15.6 0.0 1.3 1 0 0 1 1 1 1 SHP2-interacting transmembrane adaptor protein, SIT DUF2818 PF10993.8 ORF5654 - 0.057 14.0 0.1 0.079 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2818) TFA2_Winged_2 PF18121.1 ORF55825 - 0.00083 19.0 1.3 0.0021 17.7 0.3 2.1 2 1 0 2 2 2 1 TFA2 Winged helix domain 2 HisKA PF00512.25 ORF55270 - 2.1e-12 46.9 1.0 4.7e-12 45.8 0.4 1.9 2 1 0 2 2 2 1 His Kinase A (phospho-acceptor) domain KASH_CCD PF14662.6 ORF55270 - 0.083 12.7 2.3 0.06 13.2 0.9 1.4 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Hypoth_Ymh PF09509.10 ORF53944 - 0.028 14.3 0.0 0.043 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) DUF2390 PF09523.10 ORF53944 - 0.087 13.1 1.7 0.12 12.7 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2390) RsbRD_N PF14361.6 ORF53944 - 0.36 11.5 2.0 0.65 10.7 2.0 1.5 1 1 0 1 1 1 0 RsbT co-antagonist protein rsbRD N-terminal domain Caudo_TAP PF02413.17 ORF53349 - 0.046 13.9 1.8 0.068 13.3 0.2 1.8 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK Zip PF02535.22 ORF53349 - 2.6 7.2 3.4 3.2 6.9 3.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Peptidase_S74 PF13884.6 ORF53129 - 2.8e-08 33.9 0.1 6.7e-08 32.7 0.1 1.6 1 0 0 1 1 1 1 Chaperone of endosialidase CCDC158 PF15921.5 ORF53129 - 0.0052 14.7 0.2 0.0063 14.4 0.2 1.0 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 158 DNA_alkylation PF08713.11 ORF53129 - 0.059 13.1 3.8 0.93 9.2 0.9 2.0 1 1 1 2 2 2 0 DNA alkylation repair enzyme HTH_20 PF12840.7 ORF52976 - 0.033 14.3 0.1 0.056 13.5 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain GSH_synth_ATP PF03917.17 ORF5294 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Phlebovirus_G1 PF07243.11 ORF51878 - 1.1 7.5 4.0 1.4 7.2 4.0 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 ExbD PF02472.16 ORF49179 - 8.6e-31 106.8 0.5 9.6e-31 106.7 0.5 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR NETI PF14044.6 ORF49179 - 0.17 11.7 0.1 12 5.7 0.0 2.3 2 0 0 2 2 2 0 NETI protein GSH_synth_ATP PF03917.17 ORF47517 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain FAD_binding_1 PF00667.20 ORF47330 - 0.00011 21.9 0.0 0.00013 21.6 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain LmjF365940-deam PF14421.6 ORF46986 - 4.3e-26 91.7 0.7 1.2e-17 64.2 0.1 2.0 1 1 1 2 2 2 2 A distinct subfamily of CDD/CDA-like deaminases dCMP_cyt_deam_1 PF00383.23 ORF46986 - 0.00018 21.3 0.1 0.00024 20.9 0.1 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region SHIPPO-rpt PF07004.12 ORF46399 - 0.14 13.1 5.6 0.16 12.9 0.1 3.0 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat Pex14_N PF04695.13 ORF46180 - 0.63 10.7 17.2 0.86 10.3 17.2 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region TFIIA PF03153.13 ORF46180 - 0.78 9.7 15.4 0.82 9.6 15.4 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Suf PF05843.14 ORF46180 - 7.6 6.4 9.5 9 6.2 9.5 1.0 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) PAT1 PF09770.9 ORF46180 - 9.8 4.3 12.2 11 4.2 12.2 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 DUF1600 PF07667.11 ORF46119 - 0.0077 16.4 0.8 0.013 15.7 0.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1600) DUF1574 PF07611.11 ORF46119 - 0.044 13.1 0.1 0.048 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1574) Phage_holin_5_2 PF16079.5 ORF46119 - 0.12 12.7 0.1 0.24 11.8 0.1 1.5 1 0 0 1 1 1 0 Phage holin family Hol44, in holin superfamily V adh_short PF00106.25 ORF46114 - 5.1e-08 32.6 0.0 5.9e-08 32.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Polysacc_synt_2 PF02719.15 ORF46114 - 0.00047 19.4 0.0 0.00062 19.0 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 ORF46114 - 0.002 17.6 0.0 0.0027 17.2 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase KR PF08659.10 ORF46114 - 0.0021 18.0 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_7 PF13241.6 ORF46114 - 0.005 17.3 0.0 0.0067 16.8 0.0 1.2 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 ORF46114 - 0.0051 16.9 0.1 0.007 16.4 0.1 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_binding_10 PF13460.6 ORF46114 - 0.011 15.7 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding Epimerase PF01370.21 ORF46114 - 0.012 15.0 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family NmrA PF05368.13 ORF46114 - 0.014 14.9 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family 2-Hacid_dh_C PF02826.19 ORF46114 - 0.02 14.3 0.0 0.022 14.1 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 ORF46114 - 0.047 13.0 0.0 0.054 12.8 0.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 ORF46114 - 0.056 13.7 0.3 0.1 12.9 0.1 1.5 2 0 0 2 2 2 0 TrkA-N domain 3Beta_HSD PF01073.19 ORF46114 - 0.061 12.3 0.0 0.072 12.1 0.0 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Sacchrp_dh_NADP PF03435.18 ORF46114 - 0.087 13.1 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain RmlD_sub_bind PF04321.17 ORF46114 - 0.22 10.6 0.0 0.3 10.1 0.0 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain RRM_1 PF00076.22 ORF46087 - 0.0045 16.8 0.1 0.0094 15.7 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glycoprotein_G PF00802.19 ORF46087 - 0.28 10.5 2.4 0.33 10.3 2.4 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Tash_PEST PF07708.11 ORF46087 - 0.36 11.1 3.0 0.71 10.1 3.0 1.5 1 0 0 1 1 1 0 Tash protein PEST motif CRAL_TRIO PF00650.20 ORF45506 - 2.2e-15 56.7 0.3 2.5e-15 56.5 0.3 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF45506 - 0.00021 21.5 0.6 0.00026 21.2 0.6 1.1 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain Rbsn PF11464.8 ORF4470 - 0.37 10.6 1.0 0.79 9.5 1.0 1.5 1 0 0 1 1 1 0 Rabenosyn Rab binding domain DMT_YdcZ PF04657.13 ORF43744 - 2.9e-07 30.8 5.5 3.6e-07 30.5 5.5 1.2 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ Kinesin PF00225.23 ORF43477 - 1.2e-32 113.2 0.9 1.3e-32 113.0 0.9 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF43477 - 1.9e-23 83.0 1.0 4.4e-23 81.9 1.0 1.5 1 1 0 1 1 1 1 Microtubule binding AAA_22 PF13401.6 ORF43477 - 0.053 13.8 0.0 0.072 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF43477 - 0.092 12.5 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain MMM1 PF10296.9 ORF43217 - 0.0068 15.5 0.0 0.0072 15.4 0.0 1.0 1 0 0 1 1 1 1 Maintenance of mitochondrial morphology protein 1 TPIP1 PF15338.6 ORF43189 - 0.031 14.3 2.0 0.093 12.8 0.9 2.0 2 0 0 2 2 2 0 p53-regulated apoptosis-inducing protein 1 SpoU_methylase PF00588.19 ORF43158 - 1.7e-18 67.2 0.0 1.9e-18 67.0 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family Pkinase PF00069.25 ORF42402 - 2.1e-46 158.5 0.1 2.3e-46 158.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42402 - 1.6e-25 89.9 0.0 1.7e-25 89.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF42402 - 1.6e-07 30.6 0.1 1.9e-07 30.4 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF42402 - 0.00031 20.4 0.2 0.00036 20.2 0.2 1.1 1 0 0 1 1 1 1 RIO1 family Rax2 PF12768.7 ORF42402 - 0.0017 17.8 0.0 0.0024 17.4 0.0 1.1 1 0 0 1 1 1 1 Cortical protein marker for cell polarity Pox_ser-thr_kin PF05445.11 ORF42402 - 0.0078 15.2 0.7 0.013 14.5 0.2 1.5 1 1 0 1 1 1 1 Poxvirus serine/threonine protein kinase Kinase-like PF14531.6 ORF42402 - 0.041 13.2 0.0 0.045 13.1 0.0 1.1 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF42402 - 0.12 12.2 0.0 0.24 11.3 0.0 1.4 1 1 1 2 2 2 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF42402 - 0.18 11.3 1.9 0.31 10.6 0.1 1.8 1 1 1 2 2 2 0 Choline/ethanolamine kinase DUF1761 PF08570.10 ORF42276 - 0.14 12.4 2.5 0.12 12.6 1.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1761) DUF4441 PF14536.6 ORF37669 - 0.0022 18.2 9.8 0.0035 17.5 9.8 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4441) NA37 PF04245.13 ORF37658 - 0.053 13.0 0.0 0.11 11.9 0.0 1.5 1 1 1 2 2 2 0 37-kD nucleoid-associated bacterial protein DUF2070 PF09843.9 ORF36847 - 0.019 13.3 0.8 0.02 13.2 0.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Pkinase PF00069.25 ORF36227 - 6.5e-21 74.9 0.0 8.3e-21 74.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF36227 - 2.9e-07 30.0 0.0 3.4e-07 29.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF36227 - 0.001 18.5 0.0 0.0013 18.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Na_Ca_ex PF01699.24 ORF35603 - 9.7e-17 61.3 3.8 1.2e-16 61.1 3.8 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein PCI PF01399.27 ORF35201 - 5.3e-06 26.9 3.1 2.3e-05 24.8 3.1 2.0 1 1 0 1 1 1 1 PCI domain z-alpha PF02295.17 ORF35201 - 0.57 10.3 5.6 0.27 11.3 0.6 2.5 2 1 0 2 2 2 0 Adenosine deaminase z-alpha domain Nebulin PF00880.18 ORF34706 - 0.062 13.2 3.7 2.7 8.0 1.8 2.9 2 1 0 2 2 2 0 Nebulin repeat DUF668 PF05003.12 ORF34706 - 0.25 11.9 3.5 1 9.9 0.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF668) GSH_synth_ATP PF03917.17 ORF33682 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain RAMP PF04901.13 ORF31834 - 0.01 15.8 0.7 0.015 15.3 0.7 1.2 1 0 0 1 1 1 0 Receptor activity modifying family Peptidase_M20 PF01546.28 ORF31268 - 0.00011 22.0 0.0 0.00013 21.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Mistic PF11458.8 ORF31268 - 0.015 15.2 1.3 0.033 14.1 0.0 2.1 3 0 0 3 3 3 0 Membrane-integrating protein Mistic UQ_con PF00179.26 ORF30285 - 8.5e-18 64.4 0.0 8.9e-18 64.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme PI3_PI4_kinase PF00454.27 ORF301 - 5.1e-08 33.0 0.1 8e-08 32.4 0.1 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DnaJ PF00226.31 ORF29473 - 0.017 15.2 0.0 0.029 14.5 0.0 1.4 1 0 0 1 1 1 0 DnaJ domain Pkinase PF00069.25 ORF2853 - 0.0029 17.0 0.2 0.0051 16.2 0.2 1.7 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF2853 - 0.0031 17.5 1.4 0.0051 16.8 1.4 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 ORF2853 - 0.0032 16.8 0.3 0.0078 15.5 0.1 1.6 1 1 1 2 2 2 1 Protein tyrosine kinase RIO1 PF01163.22 ORF2853 - 0.025 14.2 0.5 0.093 12.3 0.1 1.8 1 1 1 2 2 2 0 RIO1 family Choline_kinase PF01633.20 ORF2853 - 0.2 11.2 0.4 0.42 10.2 0.2 1.5 2 0 0 2 2 2 0 Choline/ethanolamine kinase MFS_1 PF07690.16 ORF28139 - 9.2e-07 28.1 9.6 1e-06 28.0 9.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily zf-CCHC_2 PF13696.6 ORF27482 - 0.00098 18.9 2.5 0.00098 18.9 2.5 2.0 2 0 0 2 2 2 1 Zinc knuckle zf-CCHC PF00098.23 ORF27482 - 0.0011 19.0 0.8 0.0011 19.0 0.8 2.3 2 0 0 2 2 2 1 Zinc knuckle ChpA-C PF03777.13 ORF27287 - 0.18 11.7 0.4 0.18 11.7 0.4 1.9 2 0 0 2 2 2 0 ChpA-C TMCO5 PF14992.6 ORF27123 - 0.0074 15.9 4.9 0.0087 15.7 4.9 1.0 1 0 0 1 1 1 1 TMCO5 family Rho_Binding PF08912.11 ORF27123 - 0.0094 16.7 4.2 0.0094 16.7 4.2 2.8 2 1 0 2 2 2 1 Rho Binding Nsp1_C PF05064.13 ORF27123 - 0.044 13.6 11.2 0.11 12.3 4.6 2.6 1 1 2 3 3 3 0 Nsp1-like C-terminal region DASH_Dad3 PF08656.10 ORF27123 - 0.045 13.8 4.3 0.84 9.8 2.0 2.3 2 1 0 2 2 2 0 DASH complex subunit Dad3 GP41 PF00517.17 ORF27123 - 0.05 13.5 0.3 0.11 12.4 0.1 1.6 1 1 0 1 1 1 0 Retroviral envelope protein DUF16 PF01519.16 ORF27123 - 0.055 14.0 7.0 4.5 7.8 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function DUF16 BLOC1_2 PF10046.9 ORF27123 - 0.065 13.5 8.3 0.67 10.3 2.2 3.1 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 AAR2 PF05282.11 ORF27123 - 0.072 12.5 0.2 0.084 12.3 0.2 1.1 1 0 0 1 1 1 0 AAR2 protein DUF3138 PF11336.8 ORF27123 - 0.079 11.6 0.2 0.095 11.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) CorA PF01544.18 ORF27123 - 0.087 12.1 2.0 0.12 11.6 1.9 1.3 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF523 PF04463.12 ORF27123 - 0.16 12.0 0.1 0.51 10.4 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF523) ZapB PF06005.12 ORF27123 - 0.21 12.0 10.5 14 6.2 0.0 2.5 2 1 0 2 2 2 0 Cell division protein ZapB SKA2 PF16740.5 ORF27123 - 0.25 11.1 13.0 4.6 7.1 0.2 3.2 2 1 1 3 3 3 0 Spindle and kinetochore-associated protein 2 MscS_porin PF12795.7 ORF27123 - 0.26 10.8 15.2 1.5 8.3 2.0 2.2 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain Phasin_2 PF09361.10 ORF27123 - 0.42 10.9 4.7 0.15 12.3 2.3 1.5 2 0 0 2 2 1 0 Phasin protein Spc7 PF08317.11 ORF27123 - 0.55 9.1 11.1 0.56 9.0 0.3 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein UPF0184 PF03670.13 ORF27123 - 0.59 10.6 4.4 2.4 8.6 0.1 2.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) MbeD_MobD PF04899.12 ORF27123 - 0.74 10.0 6.6 2.2 8.5 2.9 2.8 1 1 1 2 2 2 0 MbeD/MobD like Occludin_ELL PF07303.13 ORF27123 - 0.77 10.5 3.6 1.9 9.2 2.0 2.2 1 1 1 2 2 2 0 Occludin homology domain DUF4795 PF16043.5 ORF27123 - 0.87 9.1 7.6 2.8 7.5 7.6 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) TMPIT PF07851.13 ORF27123 - 0.9 8.7 3.1 0.66 9.2 1.8 1.5 1 1 1 2 2 2 0 TMPIT-like protein bZIP_1 PF00170.21 ORF27123 - 1.1 9.5 10.5 4.1 7.6 0.1 3.3 2 1 1 3 3 3 0 bZIP transcription factor DASH_Dad2 PF08654.10 ORF27123 - 1.1 9.7 0.1 1.1 9.7 0.1 3.2 3 1 0 3 3 3 0 DASH complex subunit Dad2 CtIP_N PF10482.9 ORF27123 - 1.2 9.2 9.0 0.3 11.2 4.7 2.1 2 1 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain WXG100 PF06013.12 ORF27123 - 1.4 9.2 7.4 19 5.5 0.0 3.3 3 1 0 3 3 3 0 Proteins of 100 residues with WXG SlyX PF04102.12 ORF27123 - 1.6 9.4 16.0 4.1 8.1 0.3 3.9 2 1 1 3 3 3 0 SlyX Laminin_II PF06009.12 ORF27123 - 1.8 8.6 5.3 4.1 7.4 1.6 2.5 1 1 0 2 2 2 0 Laminin Domain II Nup54 PF13874.6 ORF27123 - 2.6 8.1 10.5 8.9 6.4 5.7 2.8 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 CENP-F_leu_zip PF10473.9 ORF27123 - 2.8 8.0 14.9 3.9 7.5 7.8 2.5 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Sec34 PF04136.15 ORF27123 - 2.9 7.8 5.8 22 4.9 1.3 2.9 1 1 3 4 4 4 0 Sec34-like family HalX PF08663.10 ORF27123 - 7.9 6.9 14.8 6 7.3 1.4 3.7 3 1 0 4 4 4 0 HalX domain ERM PF00769.19 ORF27123 - 8.2 6.2 13.9 28 4.4 13.4 2.1 1 1 0 1 1 1 0 Ezrin/radixin/moesin family SET PF00856.28 ORF26836 - 3e-06 27.7 0.0 3.7e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 SET domain CENP-F_leu_zip PF10473.9 ORF26816 - 0.0061 16.6 0.6 0.0076 16.3 0.6 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1043 PF06295.12 ORF26816 - 0.015 15.3 1.2 0.023 14.7 1.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) CdiI PF07262.11 ORF26816 - 0.017 14.9 1.3 0.023 14.5 1.3 1.3 1 0 0 1 1 1 0 CDI immunity protein Med4 PF10018.9 ORF26816 - 0.035 13.8 0.8 0.045 13.4 0.8 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF2258 PF10015.9 ORF26380 - 0.043 13.9 0.1 0.13 12.4 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) GSH_synth_ATP PF03917.17 ORF26330 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain LEA_5 PF00477.17 ORF25846 - 0.14 12.6 0.0 0.22 12.0 0.0 1.2 1 0 0 1 1 1 0 Small hydrophilic plant seed protein Hypoth_Ymh PF09509.10 ORF25738 - 0.028 14.3 0.0 0.043 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) DUF2390 PF09523.10 ORF25738 - 0.087 13.1 1.7 0.12 12.7 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2390) RsbRD_N PF14361.6 ORF25738 - 0.36 11.5 2.0 0.65 10.7 2.0 1.5 1 1 0 1 1 1 0 RsbT co-antagonist protein rsbRD N-terminal domain MCR_alpha PF02249.17 ORF24689 - 0.049 14.1 0.2 0.089 13.2 0.1 1.4 1 1 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain Rrn6 PF10214.9 ORF23367 - 0.48 8.9 8.3 0.63 8.5 8.3 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF2408 PF10303.9 ORF23335 - 0.59 10.7 9.1 0.77 10.3 9.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) CENP-H PF05837.12 ORF23335 - 3.3 8.2 8.8 1.1 9.7 4.2 2.0 2 0 0 2 2 2 0 Centromere protein H (CENP-H) CRAL_TRIO PF00650.20 ORF23330 - 6.1e-24 84.5 0.0 7.2e-24 84.3 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF23330 - 0.00021 21.5 0.0 0.00025 21.2 0.0 1.1 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain Histone PF00125.24 ORF19641 - 2.8e-19 69.8 0.0 3.7e-19 69.4 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 ORF19641 - 6.8e-13 48.1 0.1 6.8e-13 48.1 0.1 2.0 2 0 0 2 2 2 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 ORF19641 - 0.00024 21.3 0.0 0.00033 20.9 0.0 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Kinesin PF00225.23 ORF18557 - 1.2e-32 113.2 0.9 1.3e-32 113.0 0.9 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF18557 - 1.9e-23 83.0 1.0 4.4e-23 81.9 1.0 1.5 1 1 0 1 1 1 1 Microtubule binding AAA_22 PF13401.6 ORF18557 - 0.053 13.8 0.0 0.072 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF18557 - 0.092 12.5 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain UPF0147 PF03685.13 ORF18215 - 0.0068 16.4 0.0 0.019 15.0 0.0 1.7 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0147) gerPA PF10676.9 ORF18215 - 0.017 15.4 0.1 8.2 6.8 0.1 2.3 1 1 1 2 2 2 0 Spore germination protein gerPA/gerPF DUF3456 PF11938.8 ORF18215 - 0.042 14.4 0.0 0.046 14.2 0.0 1.2 1 0 0 1 1 1 0 TLR4 regulator and MIR-interacting MSAP Peptidase_C97 PF05903.14 ORF18215 - 0.086 12.7 0.7 0.19 11.6 0.6 1.5 1 1 0 1 1 1 0 PPPDE putative peptidase domain TauE PF01925.19 ORF1730 - 8.4e-10 38.7 3.3 9.9e-10 38.4 3.3 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Bax1-I PF01027.20 ORF1730 - 0.019 14.8 3.4 0.027 14.3 3.4 1.2 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 BTAD PF03704.17 ORF16537 - 0.063 13.7 0.1 0.078 13.4 0.1 1.2 1 0 0 1 1 1 0 Bacterial transcriptional activator domain OpuAC PF04069.12 ORF15525 - 5.3e-19 68.8 0.8 6.6e-19 68.5 0.8 1.2 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Ammonium_transp PF00909.21 ORF15360 - 4.4e-20 71.8 0.2 4.9e-20 71.6 0.2 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family GSH_synth_ATP PF03917.17 ORF13477 - 9.4e-38 129.9 0.0 1e-37 129.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Synaptobrevin PF00957.21 ORF13461 - 6.2e-25 86.8 0.9 7.8e-25 86.5 0.9 1.1 1 0 0 1 1 1 1 Synaptobrevin Rop PF01815.16 ORF13461 - 0.022 14.7 0.0 0.044 13.7 0.0 1.5 1 0 0 1 1 1 0 Rop protein Baculo_F PF12259.8 ORF13461 - 0.022 13.3 0.1 0.024 13.2 0.1 1.1 1 0 0 1 1 1 0 Baculovirus F protein MCU PF04678.13 ORF13461 - 0.035 14.2 0.5 0.042 13.9 0.5 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter LMBR1 PF04791.16 ORF13461 - 0.073 12.0 0.2 0.085 11.8 0.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Longin PF13774.6 ORF13461 - 0.083 12.9 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Regulated-SNARE-like domain EMP24_GP25L PF01105.24 ORF13461 - 0.12 12.3 0.8 0.14 12.1 0.8 1.2 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD DUF2721 PF11026.8 ORF13461 - 0.47 10.4 5.0 1.7 8.5 5.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) DUF4116 PF13475.6 ORF1307 - 1.3e-21 76.1 0.0 3e-09 36.4 0.0 3.2 3 1 0 3 3 3 3 Domain of unknown function (DUF4116) HZS_alpha PF18582.1 ORF1307 - 0.078 13.5 0.0 0.27 11.7 0.0 1.8 1 1 1 2 2 2 0 Hydrazine synthase alpha subunit middle domain Opi1 PF08618.10 ORF12757 - 0.0049 16.2 0.0 0.0057 16.0 0.0 1.0 1 0 0 1 1 1 1 Transcription factor Opi1 GSH_synth_ATP PF03917.17 ORF1203 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain HrpB7 PF09486.10 ORF11897 - 0.088 13.2 0.9 0.11 12.9 0.9 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) FIVAR PF07554.13 ORF11897 - 0.11 13.3 0.5 0.11 13.3 0.5 2.5 1 1 1 2 2 2 0 FIVAR domain Arg_decarb_HB PF17810.1 ORF11897 - 0.17 12.2 0.0 0.46 10.8 0.0 1.7 2 0 0 2 2 2 0 Arginine decarboxylase helical bundle domain Baculo_PEP_C PF04513.12 ORF11897 - 0.48 10.5 3.6 14 5.8 3.6 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3813 PF12758.7 ORF11897 - 1.3 9.4 4.8 3.5 8.0 2.5 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3813) DUF948 PF06103.11 ORF11897 - 2.1 8.7 6.3 10 6.4 0.3 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) CENP-F_leu_zip PF10473.9 ORF11439 - 0.0061 16.6 0.6 0.0076 16.3 0.6 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1043 PF06295.12 ORF11439 - 0.015 15.3 1.2 0.023 14.7 1.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) CdiI PF07262.11 ORF11439 - 0.017 14.9 1.3 0.023 14.5 1.3 1.3 1 0 0 1 1 1 0 CDI immunity protein Med4 PF10018.9 ORF11439 - 0.035 13.8 0.8 0.045 13.4 0.8 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 SHIPPO-rpt PF07004.12 ORF111697 - 0.14 13.1 5.6 0.16 12.9 0.1 3.0 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat DUF4116 PF13475.6 ORF110321 - 4.6e-33 112.7 0.0 1.4e-13 50.3 0.0 3.1 2 1 2 4 4 4 4 Domain of unknown function (DUF4116) SMBP PF16785.5 ORF110321 - 0.043 14.0 1.5 0.056 13.7 1.5 1.3 1 0 0 1 1 1 0 Small metal-binding protein PCI PF01399.27 ORF109795 - 5.3e-06 26.9 3.1 2.3e-05 24.8 3.1 2.0 1 1 0 1 1 1 1 PCI domain z-alpha PF02295.17 ORF109795 - 0.57 10.3 5.6 0.27 11.3 0.6 2.5 2 1 0 2 2 2 0 Adenosine deaminase z-alpha domain DUF1218 PF06749.12 ORF107168 - 0.068 13.7 1.1 0.099 13.2 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) Casc1_N PF15927.5 ORF106781 - 0.0011 18.7 1.6 0.0015 18.3 1.6 1.2 1 0 0 1 1 1 1 Cancer susceptibility candidate 1 N-terminus DUF3896 PF13035.6 ORF106781 - 0.25 11.5 2.9 0.22 11.7 0.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3896) Ribosomal_S4 PF00163.19 ORF106781 - 0.99 10.4 7.7 0.85 10.6 6.5 1.5 1 1 0 1 1 1 0 Ribosomal protein S4/S9 N-terminal domain GSH_synth_ATP PF03917.17 ORF104205 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain SET PF00856.28 ORF103106 - 3e-10 40.8 0.0 3.3e-10 40.6 0.0 1.1 1 0 0 1 1 1 1 SET domain Glyco_hydro_30C PF17189.4 ORF102447 - 0.12 12.6 0.3 0.22 11.8 0.3 1.6 1 1 0 1 1 1 0 Glycosyl hydrolase family 30 beta sandwich domain eIF-5a PF01287.20 ORF10202 - 4.4e-07 29.9 0.2 1.1e-06 28.6 0.1 1.7 2 0 0 2 2 2 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 ORF10202 - 0.00096 19.1 0.2 0.0015 18.6 0.2 1.3 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain YolD PF08863.10 ORF10202 - 0.037 14.1 0.2 0.068 13.2 0.2 1.4 1 0 0 1 1 1 0 YolD-like protein FOP_dimer PF09398.10 ORF101532 - 0.012 15.8 0.0 0.019 15.2 0.0 1.3 1 0 0 1 1 1 0 FOP N terminal dimerisation domain DUF2880 PF11082.8 ORF101532 - 0.04 14.2 0.4 0.38 11.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2880) zf-LSD1 PF06943.12 ORF101355 - 9.4e-06 25.4 5.0 9.4e-06 25.4 5.0 2.3 2 0 0 2 2 2 1 LSD1 zinc finger DZR PF12773.7 ORF101355 - 0.0069 16.4 3.5 0.0069 16.4 3.5 1.7 1 1 1 2 2 2 1 Double zinc ribbon DUF2318 PF10080.9 ORF101355 - 0.014 15.5 2.1 0.021 15.0 2.1 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) Rpr2 PF04032.16 ORF101355 - 0.031 14.5 5.4 2.1 8.7 0.6 2.3 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Mu-like_Com PF10122.9 ORF101355 - 0.15 11.5 3.6 1.5 8.3 0.2 2.3 2 0 0 2 2 2 0 Mu-like prophage protein Com DUF2367 PF10164.9 ORF101355 - 0.22 12.1 4.8 0.33 11.5 4.8 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) PhnA_Zn_Ribbon PF08274.12 ORF101355 - 0.24 11.4 3.9 0.16 11.9 1.0 2.1 1 1 1 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_12 PF11331.8 ORF101355 - 0.38 10.6 7.6 2.7 7.9 0.8 2.6 1 1 1 3 3 3 0 Probable zinc-ribbon domain Prok-RING_4 PF14447.6 ORF101355 - 6.7 6.7 9.4 3.4 7.6 1.2 2.5 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 GSH_synth_ATP PF03917.17 ORF101259 - 1.4e-40 139.2 0.1 1.6e-40 139.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Pkinase PF00069.25 ORF101134 - 6.5e-06 25.7 0.1 7.6e-06 25.5 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain RepB-RCR_reg PF10723.9 ORF101024 - 0.019 14.9 4.9 0.019 14.9 4.9 1.7 2 0 0 2 2 2 0 Replication regulatory protein RepB CAC1F_C PF16885.5 ORF101024 - 0.49 10.0 6.4 0.53 9.9 6.4 1.0 1 0 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term GSH_synth_ATP PF03917.17 ORF10089 - 4e-39 134.4 0.1 4.4e-39 134.3 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain FlhE PF06366.13 NODE_46404_length_418_cov_2.472585_g38594_i0forward_frame_1 - 0.086 12.8 0.3 0.13 12.3 0.3 1.4 1 1 0 1 1 1 0 Flagellar protein FlhE Fer2 PF00111.27 NODE_46403_length_418_cov_2.600522_g38593_i0reverse_frame_1 - 8.2e-15 54.5 1.1 1.2e-14 54.1 1.1 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 NODE_46403_length_418_cov_2.600522_g38593_i0reverse_frame_1 - 0.011 15.7 0.6 0.016 15.2 0.6 1.3 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF3995 PF13160.6 NODE_46401_length_418_cov_2.634465_g38591_i0forward_frame_1 - 0.018 15.4 3.2 0.023 15.0 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) HTH_35 PF13693.6 NODE_46393_length_418_cov_3.417755_g38583_i0reverse_frame_1 - 0.062 13.3 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding PRMT5 PF05185.16 NODE_46393_length_418_cov_3.417755_g38583_i0reverse_frame_1 - 0.09 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase RVT_2 PF07727.14 NODE_46392_length_418_cov_3.498695_g38582_i0reverse_frame_1 - 1.7e-06 27.8 0.0 2.2e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) TMEM18 PF14770.6 NODE_46391_length_418_cov_3.579634_g38581_i0forward_frame_1 - 0.063 13.3 0.6 0.11 12.5 0.2 1.5 1 1 0 1 1 1 0 Transmembrane protein 18 DUF2222 PF09984.9 NODE_46388_length_418_cov_4.657963_g38578_i0forward_frame_1 - 6.3e-15 55.3 0.1 9.1e-15 54.8 0.1 1.2 1 0 0 1 1 1 1 Uncharacterised signal transduction histidine kinase domain (DUF2222) PTPlike_phytase PF14566.6 NODE_46383_length_418_cov_35.112272_g38573_i0reverse_frame_1 - 0.24 11.5 7.3 0.41 10.8 7.3 1.3 1 1 0 1 1 1 0 Inositol hexakisphosphate Cyc-maltodext_C PF10438.9 NODE_46355_length_418_cov_110.584856_g38546_i0forward_frame_1 - 0.14 12.3 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Cyclo-malto-dextrinase C-terminal domain DUF333 PF03891.15 NODE_46354_length_418_cov_111.080940_g38545_i0reverse_frame_1 - 0.044 14.0 1.4 25 5.2 0.0 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF333) Sex_peptide PF08138.11 NODE_46354_length_418_cov_111.080940_g38545_i0reverse_frame_1 - 0.16 12.2 2.4 5.8 7.1 0.0 2.4 2 0 0 2 2 2 0 Sex peptide (SP) family DUF5350 PF17299.2 NODE_46354_length_418_cov_111.080940_g38545_i0reverse_frame_1 - 0.61 10.6 3.1 3.1 8.3 1.6 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5350) PheRS_DBD2 PF18554.1 NODE_46354_length_418_cov_111.080940_g38545_i0forward_frame_1 - 3.1 7.8 6.2 8.9 6.4 0.9 2.4 2 0 0 2 2 2 0 PheRS DNA binding domain 2 UBA PF00627.31 NODE_46341_length_418_cov_210.394256_g38533_i0reverse_frame_1 - 0.0034 17.2 0.6 0.0067 16.3 0.6 1.4 1 0 0 1 1 1 1 UBA/TS-N domain CUE PF02845.16 NODE_46341_length_418_cov_210.394256_g38533_i0reverse_frame_1 - 0.15 11.8 0.1 0.43 10.3 0.0 1.7 2 0 0 2 2 2 0 CUE domain RR_TM4-6 PF06459.12 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.021 14.6 15.5 0.023 14.5 15.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 GAGA_bind PF06217.12 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.028 14.7 12.1 0.029 14.7 12.1 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Connexin PF00029.19 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.13 12.0 9.1 0.16 11.7 9.1 1.3 1 0 0 1 1 1 0 Connexin DUF1682 PF07946.14 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.25 10.5 23.9 0.31 10.2 23.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) RNA_pol_Rpc4 PF05132.14 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.28 11.6 9.4 0.32 11.4 9.4 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 DDHD PF02862.17 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 2 8.5 8.3 2.2 8.4 8.3 1.1 1 0 0 1 1 1 0 DDHD domain Coilin_N PF15862.5 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 2.3 8.0 21.7 1.4 8.7 19.9 1.7 2 0 0 2 2 2 0 Coilin N-terminus Presenilin PF01080.17 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 3.6 6.2 8.7 3.4 6.3 8.7 1.1 1 0 0 1 1 1 0 Presenilin EOS1 PF12326.8 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 4.5 7.2 6.6 5.5 6.9 6.6 1.2 1 0 0 1 1 1 0 N-glycosylation protein Peroxin-13_N PF04088.13 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 5.4 7.3 7.6 7.8 6.8 7.6 1.4 1 1 0 1 1 1 0 Peroxin 13, N-terminal region ALMT PF11744.8 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 8 5.2 15.3 8.6 5.1 15.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Tetraspanin PF00335.20 NODE_46332_length_419_cov_1.567708_g38524_i0reverse_frame_1 - 0.43 10.2 8.1 0.57 9.9 7.9 1.3 1 1 0 1 1 1 0 Tetraspanin family Nefa_Nip30_N PF10187.9 NODE_46316_length_419_cov_3.127604_g38508_i0reverse_frame_1 - 0.14 12.5 9.5 0.28 11.6 9.5 1.5 1 0 0 1 1 1 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 UPF0242 PF06785.11 NODE_46306_length_419_cov_29.643229_g38498_i0forward_frame_1 - 0.0081 16.3 11.0 0.013 15.6 11.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus V-SNARE PF05008.15 NODE_46306_length_419_cov_29.643229_g38498_i0forward_frame_1 - 0.016 15.6 10.8 0.026 14.9 0.7 3.0 2 1 1 3 3 3 0 Vesicle transport v-SNARE protein N-terminus DivIC PF04977.15 NODE_46306_length_419_cov_29.643229_g38498_i0forward_frame_1 - 0.018 14.8 6.1 0.018 14.8 6.1 2.1 1 1 0 2 2 2 0 Septum formation initiator Atg14 PF10186.9 NODE_46306_length_419_cov_29.643229_g38498_i0forward_frame_1 - 0.027 13.5 6.2 0.035 13.2 6.2 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4407 PF14362.6 NODE_46306_length_419_cov_29.643229_g38498_i0forward_frame_1 - 0.051 12.9 1.5 0.06 12.7 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Tup_N PF08581.10 NODE_46306_length_419_cov_29.643229_g38498_i0forward_frame_1 - 0.065 13.6 10.6 0.33 11.3 10.1 2.4 1 1 0 1 1 1 0 Tup N-terminal Exonuc_VII_L PF02601.15 NODE_46306_length_419_cov_29.643229_g38498_i0forward_frame_1 - 0.56 9.7 6.7 0.59 9.7 6.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit SlyX PF04102.12 NODE_46306_length_419_cov_29.643229_g38498_i0forward_frame_1 - 1.3 9.7 5.5 1.2 9.8 2.7 2.0 1 1 1 2 2 2 0 SlyX Polyketide_cyc2 PF10604.9 NODE_46297_length_419_cov_68.768229_g38489_i0reverse_frame_1 - 2.6e-05 24.5 0.2 3.2e-05 24.2 0.2 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport CEP209_CC5 PF16574.5 NODE_46290_length_419_cov_81.390625_g38482_i0reverse_frame_1 - 0.17 12.1 3.7 0.21 11.7 3.7 1.1 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 Csm1_N PF18504.1 NODE_46290_length_419_cov_81.390625_g38482_i0reverse_frame_1 - 0.39 11.1 6.4 0.41 11.0 2.2 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF3925 PF13063.6 NODE_46284_length_419_cov_92.231771_g38476_i0reverse_frame_1 - 0.2 11.9 4.5 0.67 10.2 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3925) Apocytochr_F_C PF01333.19 NODE_46263_length_419_cov_3744.369792_g38455_i0reverse_frame_1 - 1.2e-35 122.1 0.1 1.5e-35 121.8 0.1 1.1 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF5006 PF16397.5 NODE_46263_length_419_cov_3744.369792_g38455_i0reverse_frame_1 - 0.00019 20.7 0.1 0.00024 20.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5006) RnfC_N PF13375.6 NODE_46263_length_419_cov_3744.369792_g38455_i0reverse_frame_1 - 0.039 13.9 0.3 2 8.4 0.1 2.2 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain RCC1 PF00415.18 NODE_46254_length_420_cov_2.296104_g38446_i0forward_frame_1 - 2.1e-22 79.5 2.6 4.7e-11 43.1 0.1 2.9 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_46254_length_420_cov_2.296104_g38446_i0forward_frame_1 - 3.4e-15 55.4 7.8 3.8e-07 29.7 0.4 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RPE65 PF03055.15 NODE_46254_length_420_cov_2.296104_g38446_i0forward_frame_1 - 0.018 14.3 0.1 0.019 14.2 0.1 1.1 1 0 0 1 1 1 0 Retinal pigment epithelial membrane protein TMEM192 PF14802.6 NODE_46250_length_420_cov_2.441558_g38442_i0reverse_frame_1 - 0.14 11.2 0.1 0.18 10.9 0.1 1.1 1 0 0 1 1 1 0 TMEM192 family LamB PF02264.15 NODE_46240_length_420_cov_3.974026_g38432_i0reverse_frame_1 - 6.6e-47 161.2 1.3 7.2e-47 161.1 1.3 1.0 1 0 0 1 1 1 1 LamB porin DRE2_N PF16803.5 NODE_46236_length_420_cov_6.636364_g38428_i0forward_frame_1 - 0.18 12.0 0.0 1 9.6 0.0 1.9 2 0 0 2 2 2 0 Fe-S cluster assembly protein DRE2 N-terminus Ribosomal_S17 PF00366.20 NODE_46228_length_420_cov_62.644156_g38421_i0reverse_frame_1 - 4.5e-09 36.3 0.6 9.1e-09 35.3 0.6 1.4 1 0 0 1 1 1 1 Ribosomal protein S17 Sas10_Utp3 PF04000.15 NODE_46221_length_420_cov_79.901299_g38414_i0forward_frame_1 - 0.37 11.4 3.3 1.6 9.4 0.4 2.3 1 1 1 2 2 2 0 Sas10/Utp3/C1D family TilS PF09179.11 NODE_46213_length_420_cov_88.036364_g38406_i0reverse_frame_1 - 0.03 14.8 0.5 0.3 11.6 0.0 2.4 1 1 1 2 2 2 0 TilS substrate binding domain SET PF00856.28 NODE_46209_length_420_cov_125.220779_g38402_i0forward_frame_1 - 5.9e-07 30.0 0.0 8.4e-06 26.3 0.0 2.0 1 1 0 1 1 1 1 SET domain SAF PF08666.12 NODE_46209_length_420_cov_125.220779_g38402_i0forward_frame_1 - 0.13 12.9 0.0 9.9 6.9 0.0 2.4 2 0 0 2 2 2 0 SAF domain DNA_pol3_beta_2 PF02767.16 NODE_46209_length_420_cov_125.220779_g38402_i0forward_frame_1 - 0.21 11.8 0.0 0.25 11.6 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III beta subunit, central domain DUF432 PF04254.13 NODE_46201_length_420_cov_168.890909_g38394_i0reverse_frame_1 - 0.05 13.8 0.0 0.062 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF432) Matrilin_ccoil PF10393.9 NODE_46199_length_420_cov_185.270130_g38392_i0forward_frame_1 - 0.037 13.9 0.5 0.12 12.2 0.5 2.0 1 1 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin DUF948 PF06103.11 NODE_46199_length_420_cov_185.270130_g38392_i0forward_frame_1 - 0.13 12.6 0.9 0.34 11.2 0.8 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Tctex-1 PF03645.13 NODE_46199_length_420_cov_185.270130_g38392_i0forward_frame_1 - 0.22 11.8 5.2 0.98 9.7 5.2 2.0 1 1 0 1 1 1 0 Tctex-1 family FapA PF03961.13 NODE_46199_length_420_cov_185.270130_g38392_i0forward_frame_1 - 6.1 5.3 13.4 7.1 5.1 13.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF432 PF04254.13 NODE_46190_length_420_cov_319.740260_g38383_i0reverse_frame_1 - 0.089 13.0 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF432) Peptidase_S49_N PF08496.10 NODE_46182_length_421_cov_1.764249_g38376_i0forward_frame_3 - 0.069 13.2 5.6 0.088 12.9 5.6 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Autotransporter PF03797.19 NODE_46178_length_421_cov_2.435233_g38372_i0reverse_frame_3 - 4.6e-10 39.6 2.1 5.2e-10 39.4 1.2 1.5 1 1 0 1 1 1 1 Autotransporter beta-domain YadA_anchor PF03895.15 NODE_46178_length_421_cov_2.435233_g38372_i0reverse_frame_3 - 0.23 11.6 1.6 0.36 11.0 0.7 1.7 2 0 0 2 2 2 0 YadA-like membrane anchor domain Cu-oxidase_2 PF07731.14 NODE_46178_length_421_cov_2.435233_g38372_i0forward_frame_3 - 0.0013 18.5 0.6 0.7 9.6 0.1 2.2 1 1 1 2 2 2 2 Multicopper oxidase UPF0565 PF10561.9 NODE_46178_length_421_cov_2.435233_g38372_i0forward_frame_3 - 0.092 11.9 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Latrotoxin_C PF15658.6 NODE_46178_length_421_cov_2.435233_g38372_i0forward_frame_3 - 0.1 12.4 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Latrotoxin C-terminal domain Glyco_hydro_3 PF00933.21 NODE_46173_length_421_cov_3.155440_g38367_i0forward_frame_2 - 0.00025 20.6 0.0 0.0003 20.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Transformer PF06495.11 NODE_46172_length_421_cov_3.163212_g38366_i0reverse_frame_3 - 7.5 6.6 14.7 10 6.2 14.7 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein DNA_pol_B_3 PF08408.10 NODE_46172_length_421_cov_3.163212_g38366_i0forward_frame_3 - 0.068 13.4 1.1 0.092 12.9 1.1 1.4 1 1 0 1 1 1 0 DNA polymerase family B viral insert GP70 PF17429.2 NODE_46169_length_421_cov_3.505181_g38363_i0reverse_frame_2 - 0.19 11.6 0.0 0.37 10.7 0.0 1.4 1 0 0 1 1 1 0 Gene product 70 Cyclin PF08613.11 NODE_46166_length_421_cov_7.891192_g38360_i0reverse_frame_2 - 1.3e-21 77.6 2.0 1.5e-21 77.4 2.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 NODE_46166_length_421_cov_7.891192_g38360_i0reverse_frame_2 - 3.9e-05 23.4 0.5 6.3e-05 22.7 0.4 1.3 1 1 0 1 1 1 1 Cyclin, N-terminal domain NIR_SIR PF01077.22 NODE_46165_length_421_cov_20.753886_g38359_i0forward_frame_3 - 0.18 11.3 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain Spo7_2_N PF15407.6 NODE_46165_length_421_cov_20.753886_g38359_i0forward_frame_2 - 0.22 11.2 2.3 41 3.9 0.0 3.1 2 1 1 3 3 3 0 Sporulation protein family 7 NIR_SIR PF01077.22 NODE_46164_length_421_cov_20.777202_g38358_i0reverse_frame_3 - 0.16 11.5 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain Spo7_2_N PF15407.6 NODE_46164_length_421_cov_20.777202_g38358_i0reverse_frame_2 - 0.28 10.9 2.6 41 3.9 0.0 3.1 2 1 1 3 3 3 0 Sporulation protein family 7 Maf_N PF08383.11 NODE_46164_length_421_cov_20.777202_g38358_i0forward_frame_2 - 0.035 13.9 0.0 0.056 13.2 0.0 1.3 1 0 0 1 1 1 0 Maf N-terminal region DUF3275 PF11679.8 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 0.37 10.7 5.4 0.47 10.4 5.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) DUF4410 PF14366.6 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 0.9 9.4 6.9 0.29 11.0 3.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4410) SAPS PF04499.15 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 1.5 7.5 11.0 1.7 7.4 11.0 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF4407 PF14362.6 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 3.9 6.7 12.4 5 6.4 12.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FUSC PF04632.12 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 7.1 5.0 6.4 8.7 4.7 6.4 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF2830 PF11125.8 NODE_46150_length_421_cov_89.163212_g38345_i0reverse_frame_3 - 0.022 14.7 2.7 0.049 13.6 2.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2830) zf-RING_2 PF13639.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 1.9e-09 37.7 11.6 1.9e-09 37.7 11.6 1.9 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 6.2e-08 32.8 7.7 6.2e-08 32.8 7.7 2.1 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 4.7e-07 29.5 9.9 4.7e-07 29.5 9.9 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 1.8e-06 27.9 2.9 2.7e-06 27.3 2.9 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 2.4e-05 24.1 11.0 2.4e-05 24.1 11.0 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 7.3e-05 22.6 9.3 7.3e-05 22.6 9.3 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.00043 20.0 7.9 0.00043 20.0 7.9 3.3 4 0 0 4 4 4 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.0025 17.8 4.8 0.0025 17.8 4.8 2.9 3 0 0 3 3 3 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.0029 17.5 8.5 0.0029 17.5 8.5 1.8 2 0 0 2 2 2 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.0096 15.8 11.6 0.01 15.6 9.9 1.9 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zinc_ribbon_16 PF17034.5 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.019 15.2 2.6 0.019 15.2 2.6 1.9 1 1 1 2 2 2 0 Zinc-ribbon like family Zn_ribbon_17 PF17120.5 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.093 12.4 9.6 0.13 11.9 8.3 1.9 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 2.3 8.4 8.8 35 4.7 9.3 2.6 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING DUF2101 PF09874.9 NODE_46140_length_421_cov_204.121762_g38335_i0forward_frame_2 - 1.5 8.5 14.2 1.7 8.3 14.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) RGM_C PF06534.13 NODE_46138_length_421_cov_210.020725_g38333_i0reverse_frame_2 - 0.11 12.1 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Repulsive guidance molecule (RGM) C-terminus DUF4079 PF13301.6 NODE_46126_length_421_cov_14123.025907_g38322_i0reverse_frame_2 - 2.7 8.1 5.9 17 5.6 5.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) Virul_fac_BrkB PF03631.15 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.00059 19.5 2.9 0.00073 19.2 2.9 1.1 1 0 0 1 1 1 1 Virulence factor BrkB DUF3377 PF11857.8 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.02 14.8 0.0 0.02 14.8 0.0 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF3377) LRR19-TM PF15176.6 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.041 13.9 2.0 0.041 13.9 2.0 1.6 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain MFS_1 PF07690.16 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.054 12.4 1.0 0.071 12.0 1.0 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily ATP-synt_8 PF00895.20 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.19 12.2 0.5 0.19 12.2 0.5 2.6 3 0 0 3 3 3 0 ATP synthase protein 8 Frag1 PF10277.9 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.21 11.1 13.1 0.3 10.6 7.7 2.1 1 1 1 2 2 2 0 Frag1/DRAM/Sfk1 family Methyltransf_20 PF12147.8 NODE_46119_length_422_cov_1.695090_g38315_i0forward_frame_2 - 5.9e-39 134.0 0.0 6.7e-39 133.9 0.0 1.0 1 0 0 1 1 1 1 Putative methyltransferase Arabinose_bd PF12625.7 NODE_46119_length_422_cov_1.695090_g38315_i0forward_frame_2 - 0.044 13.9 0.0 0.06 13.4 0.0 1.2 1 0 0 1 1 1 0 Arabinose-binding domain of AraC transcription regulator, N-term TSNAXIP1_N PF15739.5 NODE_46118_length_422_cov_1.744186_g38314_i0reverse_frame_2 - 0.053 13.9 1.4 0.11 12.8 1.1 1.6 1 1 0 1 1 1 0 Translin-associated factor X-interacting N-terminus Nucleo_P87 PF07267.11 NODE_46117_length_422_cov_1.754522_g38313_i0reverse_frame_2 - 2.4 6.9 6.8 2.9 6.6 6.8 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Shikimate_dh_N PF08501.11 NODE_46110_length_422_cov_2.317829_g38306_i0forward_frame_2 - 7.3e-14 51.8 0.0 1.5e-13 50.8 0.0 1.5 2 0 0 2 2 2 1 Shikimate dehydrogenase substrate binding domain Resolvase PF00239.21 NODE_46103_length_422_cov_3.126615_g38299_i0reverse_frame_2 - 9.7e-05 22.5 0.0 0.00014 21.9 0.0 1.3 1 0 0 1 1 1 1 Resolvase, N terminal domain Ninjurin PF04923.12 NODE_46100_length_422_cov_3.400517_g38296_i0reverse_frame_3 - 0.052 13.5 3.5 1.5 8.8 3.7 2.3 1 1 1 2 2 2 0 Ninjurin Phyto-Amp PF15438.6 NODE_46100_length_422_cov_3.400517_g38296_i0forward_frame_2 - 0.054 13.3 0.4 0.081 12.7 0.4 1.2 1 0 0 1 1 1 0 Antigenic membrane protein of phytoplasma UvrB_inter PF17757.1 NODE_46100_length_422_cov_3.400517_g38296_i0forward_frame_2 - 0.1 12.8 0.1 0.17 12.1 0.1 1.3 1 0 0 1 1 1 0 UvrB interaction domain WES_acyltransf PF03007.16 NODE_46099_length_422_cov_3.950904_g38295_i0forward_frame_3 - 9.3e-07 28.9 0.0 1.2e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 NODE_46099_length_422_cov_3.950904_g38295_i0forward_frame_3 - 0.002 16.9 0.2 0.0025 16.5 0.2 1.1 1 0 0 1 1 1 1 Condensation domain zf-RING_2 PF13639.6 NODE_46096_length_422_cov_28.524548_g38292_i0forward_frame_3 - 0.012 15.9 1.7 0.033 14.5 1.7 1.7 1 0 0 1 1 1 0 Ring finger domain zf-RING_UBOX PF13445.6 NODE_46096_length_422_cov_28.524548_g38292_i0forward_frame_3 - 0.023 14.7 4.5 0.062 13.3 4.5 1.8 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_46096_length_422_cov_28.524548_g38292_i0forward_frame_3 - 0.071 13.0 2.5 0.15 11.9 2.5 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_46096_length_422_cov_28.524548_g38292_i0forward_frame_3 - 1.4 8.7 11.5 0.39 10.5 7.4 2.2 2 1 0 2 2 2 0 RING-like zinc finger Nitrate_red_del PF02613.15 NODE_46093_length_422_cov_60.098191_g38289_i0forward_frame_2 - 0.12 12.4 0.0 1.1 9.2 0.0 2.1 1 1 1 2 2 2 0 Nitrate reductase delta subunit XTBD PF11952.8 NODE_46090_length_422_cov_67.291990_g38286_i0reverse_frame_2 - 0.42 10.4 2.2 5 7.0 0.1 2.2 2 0 0 2 2 2 0 XRN-Two Binding Domain, XTBD # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks161.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks161.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks161.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks161.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- cIII PF08134.11 NODE_46089_length_422_cov_75.105943_g38285_i0forward_frame_3 - 0.17 11.7 1.0 0.42 10.4 1.0 1.7 1 0 0 1 1 1 0 cIII protein family HTH_Crp_2 PF13545.6 NODE_46085_length_422_cov_77.271318_g38281_i0reverse_frame_2 - 0.022 14.7 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUSP PF06337.12 NODE_46082_length_422_cov_86.103359_g38278_i0forward_frame_3 - 0.00064 20.3 0.5 0.00083 19.9 0.5 1.2 1 0 0 1 1 1 1 DUSP domain RuvA_C PF07499.13 NODE_46079_length_422_cov_91.547804_g38275_i0forward_frame_2 - 0.0026 18.2 1.1 0.0049 17.3 1.1 1.4 1 0 0 1 1 1 1 RuvA, C-terminal domain PRCC PF10253.9 NODE_46079_length_422_cov_91.547804_g38275_i0forward_frame_2 - 0.21 12.4 3.7 0.22 12.3 3.7 1.1 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting DUF2171 PF09939.9 NODE_46068_length_422_cov_132.253230_g38264_i0reverse_frame_3 - 0.12 12.7 0.6 0.17 12.2 0.1 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2171) Dna2 PF08696.11 NODE_46067_length_422_cov_137.576227_g38263_i0reverse_frame_2 - 0.13 12.1 1.8 0.17 11.7 1.8 1.2 1 0 0 1 1 1 0 DNA replication factor Dna2 Nucleo_LEF-12 PF06256.11 NODE_46060_length_422_cov_170.082687_g38256_i0reverse_frame_3 - 0.059 13.1 0.1 0.065 13.0 0.1 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus LEF-12 protein BALF1 PF06861.11 NODE_46059_length_422_cov_171.741602_g38255_i0reverse_frame_3 - 0.11 12.2 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 BALF1 protein TBK1_ULD PF18396.1 NODE_46059_length_422_cov_171.741602_g38255_i0forward_frame_3 - 0.078 12.9 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain DUF3242 PF11586.8 NODE_46047_length_422_cov_992.981912_g38243_i0reverse_frame_3 - 0.1 12.3 1.1 0.14 11.9 1.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3242) FixS PF03597.15 NODE_46047_length_422_cov_992.981912_g38243_i0reverse_frame_3 - 0.37 10.5 0.0 0.37 10.5 0.0 1.8 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type zf-Dof PF02701.15 NODE_46040_length_423_cov_1.551546_g38238_i0reverse_frame_3 - 0.028 14.6 0.2 0.062 13.5 0.2 1.5 1 0 0 1 1 1 0 Dof domain, zinc finger PhnA_Zn_Ribbon PF08274.12 NODE_46040_length_423_cov_1.551546_g38238_i0reverse_frame_3 - 0.22 11.5 3.1 0.69 9.9 0.1 2.5 2 0 0 2 2 2 0 PhnA Zinc-Ribbon VCX_VCY PF15231.6 NODE_46040_length_423_cov_1.551546_g38238_i0forward_frame_3 - 0.0096 16.6 3.5 0.013 16.2 3.5 1.1 1 0 0 1 1 1 1 Variable charge X/Y family PKcGMP_CC PF16808.5 NODE_46039_length_423_cov_1.703608_g38237_i0reverse_frame_2 - 0.00027 20.7 2.5 0.39 10.6 0.2 2.3 2 0 0 2 2 2 2 Coiled-coil N-terminus of cGMP-dependent protein kinase bZIP_1 PF00170.21 NODE_46039_length_423_cov_1.703608_g38237_i0reverse_frame_2 - 0.22 11.6 6.0 0.32 11.1 4.0 2.0 1 1 1 2 2 2 0 bZIP transcription factor HALZ PF02183.18 NODE_46039_length_423_cov_1.703608_g38237_i0reverse_frame_2 - 0.34 11.2 3.0 0.54 10.5 0.6 2.1 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF2280 PF10045.9 NODE_46036_length_423_cov_1.896907_g38234_i0forward_frame_3 - 0.048 13.9 0.1 0.077 13.3 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2280) ADH_zinc_N PF00107.26 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 2.2e-23 82.6 0.0 2.6e-23 82.4 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 2e-07 30.5 0.2 2e-07 30.5 0.2 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Glu_dehyd_C PF16912.5 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 1.5e-05 24.6 0.2 1.7e-05 24.4 0.2 1.0 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus 3HCDH_N PF02737.18 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.00019 21.3 0.1 0.00022 21.2 0.1 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Methyltransf_25 PF13649.6 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.0045 17.7 0.0 0.0078 16.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UDPG_MGDP_dh_N PF03721.14 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.0065 16.1 0.0 0.0074 15.9 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_binding_2 PF00890.24 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.02 14.0 0.3 0.022 13.9 0.3 1.2 1 0 0 1 1 1 0 FAD binding domain TrkA_N PF02254.18 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.024 14.9 0.1 0.048 13.9 0.0 1.5 1 1 0 1 1 1 0 TrkA-N domain Shikimate_DH PF01488.20 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.035 14.2 0.1 0.048 13.7 0.1 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.042 13.2 0.0 0.054 12.9 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PrmA PF06325.13 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.047 13.1 0.1 0.056 12.8 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Sacchrp_dh_NADP PF03435.18 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.055 13.7 0.1 0.071 13.4 0.1 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox PF00070.27 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.074 13.6 0.6 0.19 12.3 0.3 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HTH_26 PF13443.6 NODE_46029_length_423_cov_2.742268_g38227_i0reverse_frame_2 - 0.1 13.1 0.2 0.16 12.4 0.2 1.3 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain MscL PF01741.18 NODE_46028_length_423_cov_2.788660_g38226_i0reverse_frame_3 - 0.045 14.0 0.1 0.055 13.8 0.1 1.2 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL SRTM1 PF15872.5 NODE_46028_length_423_cov_2.788660_g38226_i0forward_frame_3 - 0.088 13.0 1.7 0.12 12.5 1.3 1.5 1 1 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 TraD PF06412.11 NODE_46026_length_423_cov_2.979381_g38224_i0reverse_frame_2 - 0.12 12.2 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Conjugal transfer protein TraD UTP25 PF06862.12 NODE_46024_length_423_cov_3.139175_g38222_i0forward_frame_3 - 0.0023 16.8 3.7 0.0025 16.6 3.7 1.1 1 0 0 1 1 1 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 ALG3 PF05208.13 NODE_46023_length_423_cov_3.175258_g38221_i0forward_frame_3 - 1.4e-09 37.9 6.1 1.8e-09 37.5 6.1 1.2 1 0 0 1 1 1 1 ALG3 protein NCE101 PF11654.8 NODE_46022_length_423_cov_3.288660_g38220_i0reverse_frame_2 - 0.075 12.8 0.5 0.15 11.8 0.5 1.5 1 0 0 1 1 1 0 Non-classical export protein 1 OAF PF14941.6 NODE_46022_length_423_cov_3.288660_g38220_i0forward_frame_2 - 0.034 13.6 0.1 0.04 13.3 0.1 1.1 1 0 0 1 1 1 0 Transcriptional regulator, Out at first ObR_Ig PF18589.1 NODE_46022_length_423_cov_3.288660_g38220_i0forward_frame_2 - 0.12 12.8 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Obesity receptor immunoglobulin like domain SPC25 PF06703.11 NODE_46017_length_423_cov_23.930412_g38215_i0reverse_frame_2 - 0.055 13.3 3.2 0.1 12.4 3.2 1.4 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Svf1_C PF17187.4 NODE_46017_length_423_cov_23.930412_g38215_i0forward_frame_2 - 0.03 14.1 0.9 0.038 13.8 0.9 1.1 1 0 0 1 1 1 0 Svf1-like C-terminal lipocalin-like domain PGA_cap PF09587.10 NODE_46017_length_423_cov_23.930412_g38215_i0forward_frame_2 - 0.046 13.2 0.3 0.048 13.1 0.3 1.1 1 0 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap Neur_chan_memb PF02932.16 NODE_46017_length_423_cov_23.930412_g38215_i0forward_frame_2 - 4.3 7.3 6.2 5.1 7.1 6.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Peptidase_C2 PF00648.21 NODE_46011_length_423_cov_63.396907_g38209_i0reverse_frame_2 - 1.6e-21 76.6 0.1 1.9e-21 76.4 0.1 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Hormone_3 PF00159.18 NODE_46011_length_423_cov_63.396907_g38209_i0reverse_frame_2 - 0.13 12.4 0.1 0.26 11.4 0.1 1.5 1 0 0 1 1 1 0 Pancreatic hormone peptide PLN_propep PF16485.5 NODE_46010_length_423_cov_68.881443_g38208_i0reverse_frame_2 - 0.3 10.8 1.4 0.81 9.5 0.9 2.1 1 1 1 2 2 2 0 Protealysin propeptide DUF4412 PF14371.6 NODE_46004_length_423_cov_82.412371_g38202_i0forward_frame_3 - 0.069 13.0 1.8 0.097 12.5 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4412) Sugar_tr PF00083.24 NODE_46003_length_423_cov_86.208763_g38201_i0reverse_frame_3 - 2.9e-12 46.2 8.4 3.3e-12 46.0 8.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter fn3 PF00041.21 NODE_45995_length_423_cov_105.203608_g38193_i0forward_frame_3 - 9.8e-09 35.4 0.1 0.002 18.4 0.0 2.1 2 0 0 2 2 2 2 Fibronectin type III domain SusE PF14292.6 NODE_45995_length_423_cov_105.203608_g38193_i0forward_frame_3 - 0.0094 16.2 0.3 3.1 8.1 0.2 2.3 2 1 0 2 2 2 2 SusE outer membrane protein LCE6A PF15858.5 NODE_45985_length_423_cov_154.067010_g38183_i0forward_frame_3 - 0.28 12.0 6.4 0.18 12.6 4.0 1.8 2 0 0 2 2 2 0 Late cornified envelope protein 6A family DUF792 PF05632.11 NODE_45984_length_423_cov_280.286082_g38182_i0reverse_frame_3 - 0.084 12.7 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF792) Oleosin PF01277.17 NODE_45981_length_423_cov_317.994845_g38179_i0reverse_frame_3 - 0.2 11.4 1.7 0.37 10.6 1.3 1.5 1 1 1 2 2 2 0 Oleosin Orbi_VP5 PF00901.17 NODE_45980_length_423_cov_459.121134_g38178_i0reverse_frame_2 - 0.32 9.3 1.9 0.36 9.2 1.9 1.1 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP5 Tim17 PF02466.19 NODE_45973_length_423_cov_1457.773196_g38173_i0forward_frame_2 - 0.024 15.0 0.0 0.024 15.0 0.0 1.1 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family ATP11 PF06644.11 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_3 - 0.0071 16.2 0.0 0.0097 15.7 0.0 1.2 1 0 0 1 1 1 1 ATP11 protein zf-rbx1 PF12678.7 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 2.6e-24 85.3 10.0 3.9e-24 84.7 10.0 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 4.9e-16 58.6 8.7 6.7e-16 58.1 8.7 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_2 PF13639.6 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 5.6e-06 26.6 11.9 8.7e-05 22.8 11.9 2.2 1 1 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 7.8e-05 22.4 2.6 7.8e-05 22.4 2.6 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 0.00032 20.5 7.5 0.0014 18.5 7.5 2.1 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 0.011 15.4 9.6 0.021 14.6 3.9 2.4 2 0 0 2 2 2 0 RING-like zinc finger Zn_ribbon_17 PF17120.5 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 0.029 14.0 3.1 0.029 14.0 3.1 2.1 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-C3HC4_3 PF13920.6 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 0.062 13.2 3.6 1.9 8.4 0.5 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 0.073 13.3 7.2 0.22 11.7 7.3 1.7 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_UBOX PF13445.6 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 0.11 12.5 5.0 0.43 10.6 5.0 2.0 1 1 0 1 1 1 0 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 0.2 11.6 5.0 0.41 10.7 5.0 1.5 1 1 0 1 1 1 0 zinc-RING finger domain zf-C3HC4_4 PF15227.6 NODE_45972_length_423_cov_3622.146907_g38172_i0forward_frame_2 - 2.8 8.2 5.6 1 9.6 0.7 2.2 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING adh_short PF00106.25 ORF95879 - 0.0092 15.5 0.0 0.013 15.0 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Kelch_4 PF13418.6 ORF95417 - 1.7e-07 31.1 0.4 0.0064 16.5 0.1 3.0 2 1 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF95417 - 2.6e-06 27.5 0.2 0.053 13.8 0.0 3.0 2 1 0 2 2 2 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF95417 - 3.4e-06 27.1 0.0 0.0061 16.8 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF95417 - 9.5e-05 21.9 0.0 0.014 14.9 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF95417 - 0.0017 18.3 0.0 2.2 8.4 0.0 2.4 2 0 0 2 2 2 2 Kelch motif DUF3450 PF11932.8 ORF93571 - 0.0018 17.7 1.0 0.0027 17.1 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) GPS2_interact PF15784.5 ORF93571 - 0.025 15.0 0.2 0.057 13.9 0.1 1.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain DUF3446 PF11928.8 ORF93571 - 2.5 8.5 6.4 0.58 10.5 0.8 2.1 1 1 1 2 2 2 0 Early growth response N-terminal domain Pox_polyA_pol_N PF12630.7 ORF92027 - 0.053 13.9 0.9 0.078 13.3 0.9 1.3 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain RF-1 PF00472.20 ORF91928 - 5.7e-26 90.7 0.8 7.5e-26 90.4 0.8 1.0 1 0 0 1 1 1 1 RF-1 domain Peptidase_C1 PF00112.23 ORF91895 - 4.2e-29 102.2 0.0 4.7e-29 102.0 0.0 1.0 1 0 0 1 1 1 1 Papain family cysteine protease bZIP_1 PF00170.21 ORF90318 - 2e-07 31.0 7.6 2e-07 31.0 7.6 2.6 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF90318 - 2.5e-06 27.5 4.0 2.5e-06 27.5 4.0 3.2 3 0 0 3 3 3 1 Basic region leucine zipper MRP-S26 PF14943.6 ORF90318 - 0.59 10.0 16.1 1.1 9.2 16.1 1.5 1 1 0 1 1 1 0 Mitochondrial ribosome subunit S26 Mito_carr PF00153.27 ORF89621 - 4.8e-21 74.5 0.5 6.8e-18 64.4 0.3 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein JmjC PF02373.22 ORF8904 - 1.2e-28 99.8 0.0 1.5e-28 99.5 0.0 1.1 1 0 0 1 1 1 1 JmjC domain, hydroxylase GABP-alpha PF11620.8 ORF88758 - 0.046 13.9 0.0 0.071 13.3 0.0 1.3 1 0 0 1 1 1 0 GA-binding protein alpha chain 2OG-FeII_Oxy_3 PF13640.6 ORF88426 - 3.1e-05 24.8 0.1 4.8e-05 24.2 0.1 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily USP7_ICP0_bdg PF12436.8 ORF88426 - 0.19 11.0 0.0 0.24 10.7 0.0 1.1 1 0 0 1 1 1 0 ICP0-binding domain of Ubiquitin-specific protease 7 He_PIG PF05345.12 ORF8774 - 0.072 13.3 0.7 2 8.7 0.7 2.7 1 1 0 1 1 1 0 Putative Ig domain TMEM132 PF16070.5 ORF8774 - 5.3 6.3 7.9 7.6 5.8 3.1 2.0 2 0 0 2 2 2 0 Transmembrane protein family 132 Orf78 PF06024.12 ORF8697 - 0.14 12.5 0.9 0.32 11.3 0.1 1.9 1 1 1 2 2 2 0 Orf78 (ac78) WDCP PF15390.6 ORF86116 - 0.12 10.8 5.2 0.13 10.6 5.2 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Fungal_trans PF04082.18 ORF81766 - 0.059 12.4 0.8 0.069 12.2 0.8 1.2 1 0 0 1 1 1 0 Fungal specific transcription factor domain PSI_PsaJ PF01701.18 ORF81382 - 0.0018 18.7 0.1 0.0035 17.8 0.1 1.6 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ Nuc_recep-AF1 PF11825.8 ORF81382 - 0.15 12.1 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 DUF2089 PF09862.9 ORF81108 - 0.042 13.9 3.0 0.087 12.9 1.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2089) PSI_PsaJ PF01701.18 ORF80757 - 0.0018 18.7 0.1 0.0035 17.8 0.1 1.6 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ Nuc_recep-AF1 PF11825.8 ORF80757 - 0.15 12.1 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 PAP_fibrillin PF04755.12 ORF79485 - 0.00074 19.5 0.1 0.058 13.3 0.1 2.1 2 0 0 2 2 2 2 PAP_fibrillin Sybindin PF04099.12 ORF79254 - 9.1e-23 80.8 0.7 1e-22 80.6 0.7 1.0 1 0 0 1 1 1 1 Sybindin-like family Sedlin_N PF04628.13 ORF79254 - 0.032 14.3 0.1 0.037 14.2 0.1 1.2 1 0 0 1 1 1 0 Sedlin, N-terminal conserved region OSR1_C PF12202.8 ORF79236 - 0.63 10.3 3.2 1.4 9.2 2.9 1.8 1 1 1 2 2 2 0 Oxidative-stress-responsive kinase 1 C-terminal domain DUF3450 PF11932.8 ORF78480 - 0.0018 17.7 1.0 0.0027 17.1 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) GPS2_interact PF15784.5 ORF78480 - 0.025 15.0 0.2 0.057 13.9 0.1 1.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain DUF3446 PF11928.8 ORF78480 - 2.5 8.5 6.4 0.58 10.5 0.8 2.1 1 1 1 2 2 2 0 Early growth response N-terminal domain MORN PF02493.20 ORF78086 - 3.8e-07 29.6 11.6 0.00016 21.3 0.1 4.2 4 0 0 4 4 4 4 MORN repeat DHHC PF01529.20 ORF77745 - 2.2e-07 31.1 4.4 3e-07 30.6 4.4 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase IBR PF01485.21 ORF77455 - 2.8e-09 37.1 6.2 2.8e-09 37.1 6.2 2.4 2 1 0 2 2 2 2 IBR domain, a half RING-finger domain zf-AN1 PF01428.16 ORF77455 - 0.011 15.9 7.1 0.011 15.9 7.1 2.1 2 0 0 2 2 2 0 AN1-like Zinc finger Mit_KHE1 PF10173.9 ORF76184 - 0.093 12.8 0.9 0.12 12.5 0.9 1.3 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Uso1_p115_C PF04871.13 ORF76184 - 0.14 12.5 12.6 0.17 12.2 12.6 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Ax_dynein_light PF10211.9 ORF76184 - 0.36 10.7 7.2 0.58 10.1 4.7 1.9 1 1 1 2 2 2 0 Axonemal dynein light chain DUF948 PF06103.11 ORF76184 - 0.47 10.7 3.6 3.5 8.0 0.3 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF745 PF05335.13 ORF76184 - 0.73 9.5 6.3 0.88 9.3 6.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) PSI_PsaJ PF01701.18 ORF74910 - 0.0018 18.7 0.1 0.0035 17.8 0.1 1.6 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ Nuc_recep-AF1 PF11825.8 ORF74910 - 0.15 12.1 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 TRP PF06011.12 ORF73479 - 0.00038 19.3 6.8 0.00046 19.0 6.8 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Pho88 PF10032.9 ORF73479 - 0.068 12.4 0.1 0.068 12.4 0.1 1.8 2 1 0 2 2 2 0 Phosphate transport (Pho88) TMEMspv1-c74-12 PF11044.8 ORF73479 - 2.6 8.1 13.8 1 9.4 9.0 2.3 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein TctB PF07331.11 ORF73479 - 7.7 6.8 10.3 1.1e+02 3.1 10.4 2.0 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Taeniidae_ag PF05596.11 ORF71527 - 0.078 13.0 0.2 11 6.0 0.0 2.3 1 1 1 2 2 2 0 Taeniidae antigen WES_acyltransf PF03007.16 ORF70998 - 4e-05 23.5 0.0 7.1e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain TerY_C PF15616.6 ORF70998 - 0.038 14.1 0.3 0.56 10.3 0.1 2.0 2 0 0 2 2 2 0 TerY-C metal binding domain SH3_3 PF08239.11 ORF70292 - 0.095 13.0 0.1 0.17 12.2 0.1 1.5 1 0 0 1 1 1 0 Bacterial SH3 domain Lipocalin_9 PF17186.4 ORF70170 - 0.017 15.4 1.2 0.031 14.5 1.2 1.5 1 0 0 1 1 1 0 Lipocalin-like domain Membralin PF09746.9 ORF6911 - 5.3 6.0 6.5 5.8 5.8 6.5 1.1 1 0 0 1 1 1 0 Tumour-associated protein He_PIG PF05345.12 ORF67742 - 0.072 13.3 0.7 2 8.7 0.7 2.7 1 1 0 1 1 1 0 Putative Ig domain TMEM132 PF16070.5 ORF67742 - 5.3 6.3 7.9 7.6 5.8 3.1 2.0 2 0 0 2 2 2 0 Transmembrane protein family 132 CHCH PF06747.13 ORF67618 - 7.3e-06 26.0 9.1 9.6e-06 25.6 9.1 1.2 1 0 0 1 1 1 1 CHCH domain SRCR PF00530.18 ORF67618 - 0.018 15.6 0.7 0.022 15.3 0.7 1.2 1 0 0 1 1 1 0 Scavenger receptor cysteine-rich domain Cmc1 PF08583.10 ORF67618 - 0.58 10.2 5.6 1.7 8.7 0.6 2.1 1 1 1 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like CX9C PF16860.5 ORF67618 - 2 8.5 9.8 0.13 12.3 3.6 1.9 1 1 1 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, DUF2076 PF09849.9 ORF67618 - 2.2 8.2 15.9 3 7.8 15.9 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Mer2 PF09074.10 ORF67144 - 0.03 14.1 13.1 0.04 13.7 13.1 1.1 1 0 0 1 1 1 0 Mer2 Mating_N PF12731.7 ORF67144 - 0.038 14.1 0.1 0.081 13.0 0.0 1.6 2 0 0 2 2 2 0 Mating-type protein beta 1 PAP_central PF04928.17 ORF67144 - 0.18 10.8 5.5 0.22 10.5 5.5 1.1 1 0 0 1 1 1 0 Poly(A) polymerase central domain Tctex-1 PF03645.13 ORF67144 - 1.2 9.4 4.2 3 8.1 4.2 1.9 1 1 0 1 1 1 0 Tctex-1 family CHD5 PF04420.14 ORF67144 - 1.8 8.4 11.8 0.41 10.5 2.3 2.0 1 1 1 2 2 2 0 CHD5-like protein AIG1 PF04548.16 ORF67144 - 4.2 6.6 13.2 3.5 6.9 2.4 2.1 1 1 1 2 2 2 0 AIG1 family Orf78 PF06024.12 ORF66393 - 0.14 12.5 0.9 0.32 11.3 0.1 1.9 1 1 1 2 2 2 0 Orf78 (ac78) Sugar_tr PF00083.24 ORF66126 - 4.2e-21 75.3 0.4 4.5e-21 75.2 0.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF66126 - 1.4e-09 37.3 0.3 1.6e-09 37.2 0.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily SHP PF03579.13 ORF66126 - 0.0074 16.2 0.4 0.013 15.5 0.4 1.4 1 0 0 1 1 1 1 Small hydrophobic protein DUF3169 PF11368.8 ORF66126 - 0.014 14.9 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) Phage_holin_3_2 PF04550.12 ORF66126 - 0.015 15.8 0.2 0.027 15.0 0.2 1.4 1 0 0 1 1 1 0 Phage holin family 2 BioY PF02632.14 ORF66126 - 0.041 13.9 1.9 0.055 13.5 1.9 1.2 1 0 0 1 1 1 0 BioY family Pkinase PF00069.25 ORF64937 - 0.00045 19.7 0.0 0.00059 19.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF3450 PF11932.8 ORF6444 - 0.0018 17.7 1.0 0.0027 17.1 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) GPS2_interact PF15784.5 ORF6444 - 0.025 15.0 0.2 0.057 13.9 0.1 1.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain DUF3446 PF11928.8 ORF6444 - 2.5 8.5 6.4 0.58 10.5 0.8 2.1 1 1 1 2 2 2 0 Early growth response N-terminal domain DUF2689 PF10894.8 ORF64177 - 0.053 13.3 0.2 8.5 6.2 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2689) DUF4767 PF15983.5 ORF64177 - 0.13 12.5 3.1 0.2 11.9 3.1 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4767) KaiA PF07688.12 ORF6323 - 0.026 14.7 0.3 0.053 13.7 0.3 1.5 1 1 0 1 1 1 0 KaiA C-terminal domain HAUS-augmin3 PF14932.6 ORF61986 - 0.012 15.2 1.1 0.016 14.8 1.1 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Sec2p PF06428.11 ORF61986 - 0.028 14.4 0.4 0.045 13.7 0.4 1.3 1 0 0 1 1 1 0 GDP/GTP exchange factor Sec2p zinc_ribbon_5 PF13719.6 ORF61564 - 0.1 12.4 0.2 0.24 11.2 0.2 1.6 1 0 0 1 1 1 0 zinc-ribbon domain Histone_HNS PF00816.21 ORF61564 - 0.14 13.0 1.7 0.15 12.9 0.8 1.5 2 0 0 2 2 2 0 H-NS histone family RNA_pol_Rpb1_5 PF04998.17 ORF61564 - 0.15 11.5 0.9 0.16 11.3 0.9 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 CEP170_C PF15308.6 ORF61261 - 0.5 8.9 7.3 0.63 8.5 7.3 1.0 1 0 0 1 1 1 0 CEP170 C-terminus DUF2644 PF10841.8 ORF60506 - 0.14 12.4 0.1 0.14 12.4 0.1 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2644) HemY_N PF07219.13 ORF60506 - 0.7 10.1 3.5 6.3 7.0 0.0 2.3 2 0 0 2 2 2 0 HemY protein N-terminus DUF3450 PF11932.8 ORF59096 - 0.0018 17.7 1.0 0.0027 17.1 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) GPS2_interact PF15784.5 ORF59096 - 0.025 15.0 0.2 0.057 13.9 0.1 1.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain DUF3446 PF11928.8 ORF59096 - 2.5 8.5 6.4 0.58 10.5 0.8 2.1 1 1 1 2 2 2 0 Early growth response N-terminal domain EF-hand_7 PF13499.6 ORF58967 - 8.5e-05 22.9 0.3 0.078 13.4 0.0 2.1 1 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF58967 - 0.0052 16.2 0.1 0.095 12.3 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF58967 - 0.011 15.6 0.2 0.084 12.9 0.1 2.2 2 0 0 2 2 2 0 EF-hand domain EF-hand_8 PF13833.6 ORF58967 - 0.023 14.5 0.1 1.6 8.6 0.0 2.3 2 0 0 2 2 2 0 EF-hand domain pair HEPN PF05168.14 ORF58967 - 0.03 14.4 0.0 0.041 14.0 0.0 1.2 1 0 0 1 1 1 0 HEPN domain DUF229 PF02995.17 ORF58794 - 9e-06 24.6 0.5 9.7e-06 24.5 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF229) MotCF PF09158.10 ORF58794 - 0.0081 16.2 4.7 0.0096 16.0 4.3 1.3 1 1 0 1 1 1 1 Bacteriophage T4 MotA, C-terminal Tli4_C PF18426.1 ORF58794 - 0.15 12.3 0.2 0.17 12.1 0.2 1.1 1 0 0 1 1 1 0 Tle cognate immunity protein 4 C-terminal domain DUF3719 PF12516.8 ORF58188 - 0.009 15.7 0.3 0.017 14.8 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3719) Toxin_16 PF07945.11 ORF58188 - 0.43 10.5 7.6 1.1 9.2 7.6 1.7 1 0 0 1 1 1 0 Janus-atracotoxin YdjO PF14169.6 ORF55292 - 0.16 11.7 2.3 0.32 10.8 2.3 1.5 1 0 0 1 1 1 0 Cold-inducible protein YdjO Pkinase PF00069.25 ORF53919 - 0.00045 19.7 0.0 0.00059 19.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Claudin_2 PF13903.6 ORF52771 - 0.01 15.6 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction Ninjurin PF04923.12 ORF52771 - 0.038 13.9 2.5 0.066 13.2 2.1 1.5 1 1 0 1 1 1 0 Ninjurin Ost5 PF05251.12 ORF52771 - 0.051 13.8 1.4 0.1 12.9 1.4 1.5 1 1 0 1 1 1 0 Oligosaccharyltransferase subunit 5 DUF3671 PF12420.8 ORF52771 - 0.057 13.5 4.7 0.034 14.2 1.7 1.9 1 1 1 2 2 2 0 Protein of unknown function LapA_dom PF06305.11 ORF52771 - 0.06 13.2 0.7 0.12 12.2 0.7 1.5 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain zf-AN1 PF01428.16 ORF52680 - 4.4e-10 39.6 6.8 4.4e-10 39.6 6.8 1.9 2 0 0 2 2 2 1 AN1-like Zinc finger zf-C5HC2 PF02928.16 ORF52680 - 0.009 16.4 1.6 0.016 15.6 0.5 2.0 2 0 0 2 2 2 1 C5HC2 zinc finger Transp_Tc5_C PF04236.15 ORF52680 - 0.035 14.5 3.2 0.062 13.7 3.2 1.5 1 0 0 1 1 1 0 Tc5 transposase C-terminal domain zf-C3HC4_5 PF17121.5 ORF52680 - 0.048 13.6 0.9 0.048 13.6 0.9 2.0 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) IBR PF01485.21 ORF52680 - 0.05 13.8 7.6 0.1 12.9 7.6 1.5 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Membralin PF09746.9 ORF5259 - 5.3 6.0 6.5 5.8 5.8 6.5 1.1 1 0 0 1 1 1 0 Tumour-associated protein IGPD PF00475.18 ORF51104 - 1.2e-52 178.1 0.0 1.3e-52 177.9 0.0 1.0 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase Vg_Tdu PF07545.14 ORF51104 - 0.077 12.8 0.1 0.18 11.6 0.1 1.7 1 0 0 1 1 1 0 Vestigial/Tondu family Gate PF07670.14 ORF49330 - 1.5e-10 41.3 2.6 2.6e-10 40.6 0.1 2.2 2 1 0 2 2 2 1 Nucleoside recognition DUF2417 PF10329.9 ORF49330 - 0.034 13.5 2.6 0.044 13.2 2.6 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF2070 PF09843.9 ORF49330 - 0.61 8.3 3.6 0.69 8.1 3.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Aa_trans PF01490.18 ORF49185 - 1.1e-17 63.9 12.1 1.2e-17 63.7 12.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Glt_symporter PF03616.14 ORF49185 - 0.02 13.6 3.5 0.021 13.5 3.5 1.2 1 0 0 1 1 1 0 Sodium/glutamate symporter SLATT_4 PF18186.1 ORF43806 - 0.21 11.2 1.9 0.31 10.6 0.7 1.8 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 4 Pkinase PF00069.25 ORF43351 - 0.00045 19.7 0.0 0.00059 19.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Ribosomal_S25 PF03297.15 ORF40329 - 2e-28 98.5 2.2 2e-28 98.5 2.2 2.0 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 ORF40329 - 0.0077 15.8 0.5 0.0097 15.5 0.5 1.2 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 ORF40329 - 0.066 12.9 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 ORF40329 - 0.4 11.1 6.7 17 5.8 6.7 2.2 1 1 0 1 1 1 0 Recombinase SDP_N PF12278.8 ORF38933 - 1.2 9.2 7.8 0.17 12.0 3.4 1.7 2 0 0 2 2 2 0 Sex determination protein N terminal Skp1 PF01466.19 ORF38678 - 0.0084 16.2 0.1 2.6 8.2 0.0 3.0 3 0 0 3 3 3 1 Skp1 family, dimerisation domain DUF3658 PF12395.8 ORF38678 - 0.02 14.8 0.1 0.027 14.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function Myb_DNA-binding PF00249.31 ORF38678 - 0.044 14.0 0.0 0.094 12.9 0.0 1.5 1 0 0 1 1 1 0 Myb-like DNA-binding domain RRT14 PF17075.5 ORF38678 - 0.15 12.1 0.3 0.15 12.1 0.3 1.8 2 0 0 2 2 2 0 Regular of rDNA transcription protein 14 Antimicrobial_2 PF08023.12 ORF36981 - 0.1 13.2 0.1 2.3 8.8 0.1 2.4 2 0 0 2 2 2 0 Frog antimicrobial peptide Seadorna_VP7 PF07387.11 ORF36780 - 0.042 12.9 0.1 0.046 12.8 0.1 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 DUF1249 PF06853.12 ORF35771 - 2e-41 140.7 0.5 2.3e-41 140.5 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1249) OSR1_C PF12202.8 ORF34704 - 0.63 10.3 3.2 1.4 9.2 2.9 1.8 1 1 1 2 2 2 0 Oxidative-stress-responsive kinase 1 C-terminal domain DUF1633 PF07794.11 ORF33991 - 0.012 13.9 2.5 0.013 13.8 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) Mannosyl_trans2 PF04188.13 ORF32763 - 0.12 11.7 9.3 0.14 11.5 9.3 1.1 1 0 0 1 1 1 0 Mannosyltransferase (PIG-V) Ribonuc_red_sm PF00268.21 ORF32409 - 3.2e-32 112.1 0.0 3.9e-32 111.8 0.0 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Staph_haemo PF05480.11 ORF32302 - 0.095 12.5 0.3 1.6 8.6 0.1 2.4 2 0 0 2 2 2 0 Staphylococcus haemolytic protein Fumarate_red_C PF02300.17 ORF32302 - 0.097 12.8 3.2 2.9 8.0 1.0 2.1 2 0 0 2 2 2 0 Fumarate reductase subunit C DUF1461 PF07314.11 ORF29199 - 0.025 14.5 0.7 0.026 14.4 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) LURAP PF14854.6 ORF29199 - 0.051 13.5 0.2 0.099 12.6 0.2 1.4 1 0 0 1 1 1 0 Leucine rich adaptor protein UEV PF05743.13 ORF2781 - 6e-12 45.5 0.7 6.9e-12 45.3 0.7 1.1 1 0 0 1 1 1 1 UEV domain Prok-E2_B PF14461.6 ORF2781 - 0.1 12.3 0.1 0.17 11.6 0.1 1.4 1 1 0 1 1 1 0 Prokaryotic E2 family B Hydrolase_3 PF08282.12 ORF27804 - 1.5e-28 100.3 0.0 1.6e-28 100.1 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 ORF27804 - 2.6e-07 30.5 0.0 2.7e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 ORF27804 - 8e-05 23.0 0.3 0.00016 22.0 0.3 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase DASH_Dad1 PF08649.10 ORF27804 - 0.0059 16.8 1.7 0.22 11.7 0.0 2.9 3 0 0 3 3 3 1 DASH complex subunit Dad1 HAD_2 PF13419.6 ORF27804 - 0.0082 16.2 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF27804 - 0.017 15.6 0.0 0.048 14.1 0.0 1.7 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase EF-hand_14 PF17959.1 ORF27734 - 0.0038 17.5 0.1 0.0049 17.2 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain ThiW PF09512.10 ORF27143 - 0.034 14.3 0.3 0.066 13.3 0.1 1.5 1 1 0 1 1 1 0 Thiamine-precursor transporter protein (ThiW) Pkinase PF00069.25 ORF26459 - 7.7e-26 91.0 0.6 3.1e-24 85.8 0.6 2.0 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF26459 - 5.6e-14 52.1 0.1 2.5e-07 30.3 0.0 2.0 1 1 1 2 2 2 2 Protein tyrosine kinase Lipoprot_C PF08794.10 ORF26459 - 0.028 14.4 0.0 0.039 13.9 0.0 1.3 1 0 0 1 1 1 0 Lipoprotein GNA1870 C terminal like Kinase-like PF14531.6 ORF26459 - 0.036 13.4 0.1 0.28 10.5 0.0 2.0 2 0 0 2 2 2 0 Kinase-like DUF3430 PF11912.8 ORF26459 - 0.047 13.7 0.3 0.052 13.6 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3430) YukC PF10140.9 ORF26459 - 0.071 11.9 0.0 0.087 11.6 0.0 1.2 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Pkinase_fungal PF17667.1 ORF26459 - 0.086 11.6 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF26459 - 0.086 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF23125 - 7.7e-26 91.0 0.6 3.1e-24 85.8 0.6 2.0 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF23125 - 5.6e-14 52.1 0.1 2.5e-07 30.3 0.0 2.0 1 1 1 2 2 2 2 Protein tyrosine kinase Lipoprot_C PF08794.10 ORF23125 - 0.028 14.4 0.0 0.039 13.9 0.0 1.3 1 0 0 1 1 1 0 Lipoprotein GNA1870 C terminal like Kinase-like PF14531.6 ORF23125 - 0.036 13.4 0.1 0.28 10.5 0.0 2.0 2 0 0 2 2 2 0 Kinase-like DUF3430 PF11912.8 ORF23125 - 0.047 13.7 0.3 0.052 13.6 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3430) YukC PF10140.9 ORF23125 - 0.071 11.9 0.0 0.087 11.6 0.0 1.2 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Pkinase_fungal PF17667.1 ORF23125 - 0.086 11.6 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF23125 - 0.086 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family IMD PF08397.11 ORF23098 - 0.007 15.8 4.3 0.0089 15.4 4.3 1.1 1 0 0 1 1 1 1 IRSp53/MIM homology domain DUF4061 PF13270.6 ORF23098 - 0.083 13.2 0.4 0.12 12.7 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4061) Penaeidin PF05927.11 ORF22929 - 8.3 7.3 11.1 0.99 10.2 1.4 3.1 3 1 0 3 3 3 0 Penaeidin DUF5595 PF18077.1 ORF22276 - 0.077 13.1 1.8 0.18 11.9 1.8 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5595) DUF3886 PF13025.6 ORF21221 - 0.022 14.9 2.3 2.2 8.5 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3886) ABC_tran PF00005.27 ORF20736 - 1.5e-10 41.8 0.1 2e-10 41.3 0.1 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF20736 - 5.8e-05 22.6 0.2 7.2e-05 22.3 0.2 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain FKBP_N_2 PF18023.1 ORF20736 - 0.059 13.5 0.5 0.095 12.8 0.4 1.4 1 1 0 1 1 1 0 BDBT FKBP like N-terminal DUF5507 PF17612.2 ORF20736 - 0.097 12.4 0.1 0.12 12.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5507) T4SS PF07996.11 ORF18787 - 0.038 14.4 0.0 0.051 14.0 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion system proteins Ribosomal_L14 PF00238.19 ORF18178 - 1.5e-35 122.0 0.0 1.8e-35 121.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e SKA1 PF07160.12 ORF17986 - 0.018 14.9 6.9 0.027 14.3 6.9 1.3 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 1 COMP PF11598.8 ORF17986 - 0.05 14.1 0.4 0.086 13.3 0.4 1.4 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein Fib_alpha PF08702.10 ORF17986 - 1.5 9.0 8.4 0.8 9.9 1.6 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family ESR1_C PF12743.7 ORF153 - 0.012 15.3 0.0 0.05 13.4 0.1 1.9 2 0 0 2 2 2 0 Oestrogen-type nuclear receptor final C-terminal CENP-L PF13092.6 ORF14866 - 0.082 13.1 0.0 0.087 13.0 0.0 1.2 1 0 0 1 1 1 0 Kinetochore complex Sim4 subunit Fta1 PSI_PsaJ PF01701.18 ORF12031 - 0.0018 18.7 0.1 0.0035 17.8 0.1 1.6 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ Nuc_recep-AF1 PF11825.8 ORF12031 - 0.15 12.1 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 VASt PF16016.5 ORF112313 - 7.9e-06 26.4 1.3 8.6e-06 26.2 1.3 1.1 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain 7TMR-DISMED2 PF07696.11 ORF111469 - 0.14 12.2 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 7TMR-DISM extracellular 2 DUF150 PF02576.17 ORF111253 - 7e-29 100.1 0.1 1.5e-28 99.0 0.1 1.6 1 0 0 1 1 1 1 RimP N-terminal domain DUF150_C PF17384.2 ORF111253 - 6.7e-23 80.6 0.2 1e-22 80.0 0.2 1.3 1 0 0 1 1 1 1 RimP C-terminal SH3 domain Cys_Met_Meta_PP PF01053.20 ORF111185 - 3.3e-29 101.6 0.0 4e-29 101.3 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 ORF111185 - 0.016 14.4 0.0 0.018 14.2 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class I and II DUF1461 PF07314.11 ORF109964 - 0.025 14.5 0.7 0.026 14.4 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) LURAP PF14854.6 ORF109964 - 0.051 13.5 0.2 0.099 12.6 0.2 1.4 1 0 0 1 1 1 0 Leucine rich adaptor protein YdjO PF14169.6 ORF108644 - 0.16 11.7 2.3 0.32 10.8 2.3 1.5 1 0 0 1 1 1 0 Cold-inducible protein YdjO LCE PF14672.6 ORF108520 - 0.088 13.4 5.0 1.5 9.5 0.8 2.5 1 1 1 2 2 2 0 Late cornified envelope TPR_2 PF07719.17 ORF108519 - 4.1e-05 23.4 0.2 8.2e-05 22.4 0.2 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF108519 - 0.002 17.9 0.1 0.0078 16.0 0.1 1.9 1 1 0 1 1 1 1 Tetratricopeptide repeat PTPS_related PF10131.9 ORF108519 - 0.25 9.6 0.1 0.32 9.3 0.1 1.1 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein Pectate_lyase_3 PF12708.7 ORF10829 - 0.057 13.3 0.2 0.089 12.6 0.2 1.3 1 0 0 1 1 1 0 Pectate lyase superfamily protein Molydop_binding PF01568.21 ORF107758 - 4.5e-19 68.5 0.1 5.5e-19 68.2 0.1 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain ATP11 PF06644.11 ORF107533 - 0.053 13.3 0.0 0.076 12.8 0.0 1.3 1 0 0 1 1 1 0 ATP11 protein DUF5111 PF17138.4 ORF105894 - 0.032 14.1 0.0 0.043 13.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5111) UBA_3 PF09288.10 ORF105894 - 0.22 11.3 3.3 9.3 6.1 0.2 2.6 2 1 0 2 2 2 0 Fungal ubiquitin-associated domain ELP6 PF09807.9 ORF104961 - 0.094 12.1 0.0 0.17 11.3 0.0 1.4 1 1 0 1 1 1 0 Elongation complex protein 6 Melittin PF01372.17 ORF103788 - 0.21 11.6 0.2 0.36 10.9 0.2 1.4 1 0 0 1 1 1 0 Melittin Catalase_C PF18011.1 ORF103761 - 0.12 12.0 0.1 0.65 9.6 0.1 1.9 1 1 1 2 2 2 0 C-terminal domain found in long catalases EamA PF00892.20 ORF103568 - 5e-09 36.4 17.9 6e-09 36.2 6.0 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF5411 PF17424.2 ORF103568 - 0.006 16.5 0.2 0.0087 16.0 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5411) DUF5455 PF17537.2 ORF103568 - 0.026 14.9 0.7 0.026 14.9 0.7 2.5 2 1 1 3 3 3 0 Family of unknown function (DUF5455) Ycf70 PF17382.2 ORF103568 - 0.07 13.5 1.4 0.084 13.3 0.2 1.8 1 1 0 1 1 1 0 Uncharacterized Ycf70-like RecU PF03838.14 ORF103265 - 0.058 13.4 1.3 0.21 11.6 1.3 1.9 1 1 0 1 1 1 0 Recombination protein U DUF3450 PF11932.8 ORF102352 - 0.0018 17.7 1.0 0.0027 17.1 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) GPS2_interact PF15784.5 ORF102352 - 0.025 15.0 0.2 0.057 13.9 0.1 1.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain DUF3446 PF11928.8 ORF102352 - 2.5 8.5 6.4 0.58 10.5 0.8 2.1 1 1 1 2 2 2 0 Early growth response N-terminal domain Meiotic_rec114 PF03525.14 ORF101870 - 0.0051 15.8 1.8 0.0056 15.7 1.8 1.1 1 0 0 1 1 1 1 Meiotic recombination protein rec114 Hpt PF01627.23 ORF101450 - 5.3e-06 26.6 4.0 1e-05 25.7 4.0 1.6 1 1 0 1 1 1 1 Hpt domain Voltage_CLC PF00654.20 NODE_46636_length_415_cov_1.768421_g38819_i0forward_frame_1 - 3e-25 89.2 0.5 3.2e-25 89.1 0.5 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel DuoxA PF10204.9 NODE_46636_length_415_cov_1.768421_g38819_i0forward_frame_1 - 0.0027 16.8 1.3 0.0032 16.5 1.3 1.2 1 0 0 1 1 1 1 Dual oxidase maturation factor GpcrRhopsn4 PF10192.9 NODE_46635_length_415_cov_1.847368_g38818_i0reverse_frame_1 - 0.14 11.6 0.3 0.2 11.0 0.3 1.2 1 0 0 1 1 1 0 Rhodopsin-like GPCR transmembrane domain S_2TMBeta PF18153.1 NODE_46633_length_415_cov_2.123684_g38816_i0forward_frame_1 - 3.7 7.3 11.0 1.7 8.4 8.5 1.6 1 1 1 2 2 2 0 SMODS-associating 2TM, beta-strand rich effector domain Stevor PF17410.2 NODE_46628_length_415_cov_2.489474_g38811_i0forward_frame_1 - 0.4 10.2 1.0 0.49 9.9 1.0 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Imm-NTF2-2 PF15631.6 NODE_46619_length_415_cov_3.044737_g38802_i0reverse_frame_1 - 7.6e-05 22.9 0.1 0.00012 22.2 0.1 1.3 1 0 0 1 1 1 1 NTF2 fold immunity protein Presenilin PF01080.17 NODE_46609_length_415_cov_60.021053_g38792_i0forward_frame_1 - 0.091 11.5 2.0 0.1 11.3 2.0 1.1 1 0 0 1 1 1 0 Presenilin YL1 PF05764.13 NODE_46609_length_415_cov_60.021053_g38792_i0forward_frame_1 - 1.1 9.3 16.3 1.3 9.1 16.3 1.1 1 0 0 1 1 1 0 YL1 nuclear protein DUF755 PF05501.11 NODE_46602_length_415_cov_76.707895_g38785_i0forward_frame_1 - 9.9 6.5 20.9 4.1 7.7 12.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF755) Rrf2 PF02082.20 NODE_46589_length_415_cov_98.142105_g38772_i0reverse_frame_1 - 0.2 12.0 0.0 0.34 11.3 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Dmrt1 PF12374.8 NODE_46589_length_415_cov_98.142105_g38772_i0forward_frame_1 - 0.016 15.7 1.5 4.4 7.8 0.1 2.2 1 1 1 2 2 2 0 Double-sex mab3 related transcription factor 1 CRAL_TRIO_2 PF13716.6 NODE_46586_length_415_cov_104.489474_g38769_i0reverse_frame_1 - 0.061 13.5 0.0 0.077 13.1 0.0 1.3 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain DUF627 PF04781.12 NODE_46582_length_415_cov_121.436842_g38765_i0forward_frame_1 - 0.002 18.1 0.2 0.0027 17.7 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF627) zf-Tim10_DDP PF02953.15 NODE_46566_length_415_cov_1426.405263_g38750_i0reverse_frame_1 - 0.0053 16.4 0.2 0.008 15.8 0.2 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger MFS_1 PF07690.16 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_1 - 2e-10 40.1 4.9 2.4e-10 39.9 4.9 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_1 - 1.4e-05 24.2 4.6 1.6e-05 24.0 4.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Popeye PF04831.13 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_1 - 0.12 12.5 1.5 0.15 12.3 1.5 1.2 1 0 0 1 1 1 0 Popeye protein conserved region DUF2070 PF09843.9 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_1 - 0.16 10.2 8.8 0.18 10.0 8.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) AF-4 PF05110.13 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 0.00021 19.6 22.9 0.00023 19.5 22.9 1.1 1 0 0 1 1 1 1 AF-4 proto-oncoprotein FAM76 PF16046.5 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 0.064 12.6 18.7 0.078 12.3 18.7 1.0 1 0 0 1 1 1 0 FAM76 protein DUF4692 PF15763.5 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 0.59 10.6 10.7 0.78 10.2 10.7 1.2 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) Menin PF05053.13 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 2.1 6.6 12.3 2.4 6.4 12.3 1.0 1 0 0 1 1 1 0 Menin TraG-D_C PF12696.7 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 4.6 7.2 12.6 9 6.3 12.6 1.5 1 1 0 1 1 1 0 TraM recognition site of TraD and TraG Gti1_Pac2 PF09729.9 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 5.5 7.0 16.1 7.8 6.5 16.1 1.3 1 1 0 1 1 1 0 Gti1/Pac2 family DUF1180 PF06679.12 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 9.6 6.6 7.8 13 6.2 7.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Coronavirus_5 PF05528.11 NODE_46559_length_416_cov_1.887139_g38744_i0forward_frame_1 - 0.043 13.8 0.1 0.091 12.7 0.0 1.6 1 1 0 1 1 1 0 Coronavirus gene 5 protein DUF723 PF05265.13 NODE_46559_length_416_cov_1.887139_g38744_i0forward_frame_1 - 0.049 13.6 0.6 0.24 11.4 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF723) DUF5320 PF17253.2 NODE_46556_length_416_cov_2.146982_g38741_i0reverse_frame_1 - 0.083 14.0 1.6 0.12 13.4 1.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5320) DEC-1_N PF04625.13 NODE_46556_length_416_cov_2.146982_g38741_i0forward_frame_1 - 1.9 7.4 3.7 2.2 7.2 3.7 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Mito_carr PF00153.27 NODE_46554_length_416_cov_2.425197_g38739_i0reverse_frame_1 - 0.032 14.1 0.0 0.042 13.8 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial carrier protein McyA_C PF12593.8 NODE_46550_length_416_cov_2.477690_g38735_i0reverse_frame_1 - 0.13 12.0 0.0 0.28 11.0 0.0 1.6 1 0 0 1 1 1 0 Microcystin synthetase C terminal Sulfatase PF00884.23 NODE_46548_length_416_cov_2.708661_g38733_i0forward_frame_1 - 1.3e-10 41.2 0.0 2e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Gag_p15 PF08723.10 NODE_46548_length_416_cov_2.708661_g38733_i0forward_frame_1 - 0.044 14.0 0.2 9.5 6.5 0.0 2.3 2 1 0 2 2 2 0 Gag protein p15 SmpB PF01668.18 NODE_46543_length_416_cov_2.871391_g38728_i0reverse_frame_1 - 1.6e-22 79.9 0.0 2.2e-22 79.5 0.0 1.2 1 0 0 1 1 1 1 SmpB protein Pex24p PF06398.11 NODE_46535_length_416_cov_3.517060_g38720_i0reverse_frame_1 - 1.3 7.9 8.7 1.3 7.9 8.7 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Nup188_C PF18378.1 NODE_46535_length_416_cov_3.517060_g38720_i0forward_frame_1 - 0.014 14.3 1.1 0.016 14.0 1.1 1.1 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain PI3K_P85_iSH2 PF16454.5 NODE_46528_length_416_cov_50.816273_g38713_i0reverse_frame_1 - 0.1 12.2 0.8 0.14 11.7 0.8 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain UBM PF14377.6 NODE_46527_length_416_cov_54.889764_g38712_i0forward_frame_1 - 1.6e-12 46.4 3.9 1.9e-06 27.1 0.6 2.6 2 0 0 2 2 2 2 Ubiquitin binding region YwiC PF14256.6 NODE_46525_length_416_cov_58.097113_g38710_i0reverse_frame_1 - 0.094 13.0 0.1 0.13 12.6 0.1 1.2 1 0 0 1 1 1 0 YwiC-like protein MFS_1 PF07690.16 NODE_46525_length_416_cov_58.097113_g38710_i0forward_frame_1 - 1e-08 34.5 0.4 1.2e-08 34.4 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3565 PF12088.8 NODE_46513_length_416_cov_113.343832_g38698_i0reverse_frame_1 - 0.052 13.5 1.4 0.41 10.6 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3565) Ribo_biogen_C PF04034.13 NODE_46486_length_417_cov_1.856021_g38672_i0reverse_frame_1 - 0.04 13.6 0.0 0.067 12.9 0.0 1.4 1 0 0 1 1 1 0 Ribosome biogenesis protein, C-terminal Peptidase_S13 PF02113.15 NODE_46485_length_417_cov_1.905759_g38671_i0reverse_frame_1 - 3.3e-51 174.4 0.0 3.6e-51 174.3 0.0 1.0 1 0 0 1 1 1 1 D-Ala-D-Ala carboxypeptidase 3 (S13) family CusF_Ec PF11604.8 NODE_46485_length_417_cov_1.905759_g38671_i0reverse_frame_1 - 0.14 12.1 0.0 0.29 11.1 0.0 1.6 1 0 0 1 1 1 0 Copper binding periplasmic protein CusF Nitrate_red_del PF02613.15 NODE_46485_length_417_cov_1.905759_g38671_i0forward_frame_1 - 0.24 11.4 0.0 0.35 10.9 0.0 1.2 1 0 0 1 1 1 0 Nitrate reductase delta subunit SprT-like PF10263.9 NODE_46480_length_417_cov_2.520942_g38666_i0reverse_frame_1 - 0.1 12.5 0.8 0.15 11.9 0.8 1.2 1 0 0 1 1 1 0 SprT-like family DUF3600 PF12207.8 NODE_46480_length_417_cov_2.520942_g38666_i0forward_frame_1 - 0.0033 17.4 0.3 0.74 9.7 0.1 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3600) CdvA PF18822.1 NODE_46480_length_417_cov_2.520942_g38666_i0forward_frame_1 - 0.013 15.4 4.1 0.16 11.8 0.5 2.6 2 1 1 3 3 3 0 CdvA-like coiled-coil domain Lamprin PF06403.11 NODE_46475_length_417_cov_3.772251_g38661_i0forward_frame_1 - 8.4 6.3 12.1 5.3 7.0 1.7 2.3 1 1 1 2 2 2 0 Lamprin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks162.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks162.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks162.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks162.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RCC1_2 PF13540.6 NODE_46470_length_417_cov_30.528796_g8997_i2forward_frame_1 - 0.00087 19.0 0.1 1.4 8.8 0.0 2.6 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PIR PF00399.19 NODE_46470_length_417_cov_30.528796_g8997_i2forward_frame_1 - 1.1 8.9 6.1 4.8 6.9 0.7 2.4 2 0 0 2 2 2 0 Yeast PIR protein repeat YjbT PF17089.5 NODE_46453_length_417_cov_82.285340_g38640_i0reverse_frame_1 - 0.096 12.7 0.0 2.4 8.2 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family HCNGP PF07818.13 NODE_46439_length_417_cov_124.175393_g38627_i0reverse_frame_1 - 0.021 15.5 0.5 0.038 14.6 0.5 1.6 1 1 0 1 1 1 0 HCNGP-like protein Erf4 PF10256.9 NODE_46434_length_417_cov_145.759162_g38622_i0forward_frame_1 - 1.5e-06 28.3 0.0 1.9e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family DUF4378 PF14309.6 NODE_46428_length_417_cov_250.431937_g38616_i0forward_frame_1 - 0.016 15.6 0.6 0.03 14.7 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4378) Novirhabdo_Nv PF05554.11 NODE_46423_length_417_cov_323.842932_g37978_i1reverse_frame_1 - 0.085 12.6 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Viral hemorrhagic septicemia virus non-virion protein AdoHcyase PF05221.17 NODE_46415_length_417_cov_2737.552356_g36701_i2reverse_frame_1 - 9.1e-23 80.8 0.1 1.1e-22 80.5 0.1 1.1 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase DUF2523 PF10734.9 NODE_46415_length_417_cov_2737.552356_g36701_i2forward_frame_1 - 0.3 11.7 3.9 8.5 7.0 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2523) VirB7 PF17413.2 NODE_46411_length_418_cov_1.843342_g38601_i0forward_frame_2 - 0.015 14.6 0.3 0.03 13.7 0.3 1.4 1 0 0 1 1 1 0 Outer membrane lipoprotein virB7 Kelch_6 PF13964.6 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 3.6e-06 27.1 0.0 5.5e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 0.00026 20.5 0.1 0.00036 20.0 0.1 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 0.033 14.5 0.0 0.057 13.7 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 0.12 12.4 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_4 PF13418.6 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 0.14 12.2 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain HPPK PF01288.20 NODE_46404_length_418_cov_2.472585_g38594_i0reverse_frame_3 - 3.6e-31 108.0 0.0 4.1e-31 107.8 0.0 1.0 1 0 0 1 1 1 1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Insulin PF00049.18 NODE_46404_length_418_cov_2.472585_g38594_i0forward_frame_2 - 0.0083 17.1 0.1 0.017 16.1 0.1 1.6 1 0 0 1 1 1 1 Insulin/IGF/Relaxin family DUF2976 PF11190.8 NODE_46403_length_418_cov_2.600522_g38593_i0reverse_frame_2 - 0.075 12.8 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) ZapC PF07126.12 NODE_46403_length_418_cov_2.600522_g38593_i0forward_frame_3 - 8.6e-06 25.4 0.1 1.4e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 Cell-division protein ZapC MFS_1 PF07690.16 NODE_46402_length_418_cov_2.603133_g38592_i0forward_frame_3 - 0.00062 18.8 14.5 0.0023 16.9 14.5 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily Acetone_carb_G PF08882.11 NODE_46401_length_418_cov_2.634465_g38591_i0forward_frame_2 - 0.93 9.7 3.7 1.1 9.4 0.4 2.2 1 1 0 2 2 2 0 Acetone carboxylase gamma subunit GSAP-16 PF14959.6 NODE_46392_length_418_cov_3.498695_g38582_i0reverse_frame_2 - 0.052 13.4 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 gamma-Secretase-activating protein C-term Allexi_40kDa PF05549.11 NODE_46385_length_418_cov_32.655352_g38575_i0reverse_frame_3 - 0.032 13.8 1.6 0.034 13.7 1.6 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein ABC_tran_CTD PF16326.5 NODE_46385_length_418_cov_32.655352_g38575_i0reverse_frame_3 - 0.032 14.5 0.7 0.12 12.6 0.1 1.9 2 0 0 2 2 2 0 ABC transporter C-terminal domain AtuA PF07287.11 NODE_46385_length_418_cov_32.655352_g38575_i0reverse_frame_3 - 0.099 11.3 0.1 0.11 11.3 0.1 1.0 1 0 0 1 1 1 0 Acyclic terpene utilisation family protein AtuA AA_permease_C PF13906.6 NODE_46385_length_418_cov_32.655352_g38575_i0forward_frame_3 - 0.016 15.2 5.5 0.016 15.2 5.5 2.5 3 0 0 3 3 3 0 C-terminus of AA_permease SHP PF03579.13 NODE_46385_length_418_cov_32.655352_g38575_i0forward_frame_2 - 0.077 13.0 0.2 0.077 13.0 0.2 1.8 2 0 0 2 2 2 0 Small hydrophobic protein Xlink PF00193.17 NODE_46383_length_418_cov_35.112272_g38573_i0reverse_frame_2 - 0.1 13.0 1.6 0.18 12.2 0.4 2.1 1 1 1 2 2 2 0 Extracellular link domain Metallothio PF00131.20 NODE_46369_length_418_cov_78.237598_g38560_i0reverse_frame_2 - 0.46 10.7 5.7 0.1 12.7 1.6 1.9 2 0 0 2 2 2 0 Metallothionein SET PF00856.28 NODE_46360_length_418_cov_95.898172_g38551_i0reverse_frame_2 - 4.6e-07 30.4 0.0 6.5e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 SET domain DUF4636 PF15468.6 NODE_46360_length_418_cov_95.898172_g38551_i0forward_frame_2 - 0.045 13.4 0.2 0.058 13.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) HIRA_B PF09453.10 NODE_46354_length_418_cov_111.080940_g38545_i0reverse_frame_2 - 0.71 9.8 3.5 7.5 6.5 0.3 2.4 2 0 0 2 2 2 0 HIRA B motif Hydrolase_4 PF12146.8 NODE_46351_length_418_cov_139.208877_g38542_i0reverse_frame_2 - 0.0011 18.3 0.0 0.0014 17.9 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 FSH1 PF03959.13 NODE_46351_length_418_cov_139.208877_g38542_i0reverse_frame_2 - 0.0088 15.7 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_1 PF00561.20 NODE_46351_length_418_cov_139.208877_g38542_i0reverse_frame_2 - 0.1 12.2 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold Membralin PF09746.9 NODE_46348_length_418_cov_145.524804_g38539_i0reverse_frame_3 - 0.013 14.6 0.3 0.017 14.2 0.3 1.1 1 0 0 1 1 1 0 Tumour-associated protein DUF1642 PF07852.11 NODE_46338_length_418_cov_382.013055_g38530_i0reverse_frame_2 - 0.051 14.1 4.3 0.067 13.8 4.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1642) PWI PF01480.17 NODE_46337_length_418_cov_432.449086_g38529_i0reverse_frame_3 - 6.6e-10 39.2 0.1 1.2e-09 38.4 0.1 1.3 1 0 0 1 1 1 1 PWI domain Pectate_lyase_2 PF06917.12 NODE_46337_length_418_cov_432.449086_g38529_i0reverse_frame_3 - 0.12 10.9 0.0 0.13 10.8 0.0 1.1 1 0 0 1 1 1 0 Periplasmic pectate lyase Connexin PF00029.19 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_3 - 0.45 10.2 8.5 0.66 9.7 8.5 1.2 1 0 0 1 1 1 0 Connexin Ureide_permease PF07168.11 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_2 - 1.1 7.9 3.9 1.3 7.7 3.9 1.1 1 0 0 1 1 1 0 Ureide permease EVC2_like PF12297.8 NODE_46335_length_418_cov_671.668407_g38527_i0forward_frame_3 - 1.2 7.8 3.5 1.2 7.7 3.5 1.2 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein DUF2207 PF09972.9 NODE_46335_length_418_cov_671.668407_g38527_i0forward_frame_3 - 3.1 6.5 7.8 3.5 6.3 7.8 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Halogen_Hydrol PF10112.9 NODE_46335_length_418_cov_671.668407_g38527_i0forward_frame_3 - 8.1 6.4 6.4 9.3 6.2 6.4 1.2 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Phospho_p8 PF10195.9 NODE_46332_length_419_cov_1.567708_g38524_i0forward_frame_3 - 0.088 13.3 0.7 0.15 12.6 0.7 1.3 1 0 0 1 1 1 0 DNA-binding nuclear phosphoprotein p8 Mitofilin PF09731.9 NODE_46330_length_419_cov_1.817708_g38522_i0reverse_frame_2 - 0.11 11.4 5.0 0.13 11.1 5.0 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein IL31 PF15209.6 NODE_46330_length_419_cov_1.817708_g38522_i0reverse_frame_2 - 0.15 11.8 5.4 0.23 11.2 5.3 1.4 1 1 0 1 1 1 0 Interleukin 31 Peptidase_A2E PF12382.8 NODE_46330_length_419_cov_1.817708_g38522_i0forward_frame_3 - 0.093 12.8 0.9 0.14 12.2 0.9 1.2 1 0 0 1 1 1 0 Retrotransposon peptidase Flu_M2 PF00599.17 NODE_46330_length_419_cov_1.817708_g38522_i0forward_frame_2 - 6 7.0 8.5 7.4 6.7 0.7 2.4 1 1 2 3 3 3 0 Influenza Matrix protein (M2) DUF4049 PF13258.6 NODE_46329_length_419_cov_1.903646_g38521_i0reverse_frame_3 - 2e-79 267.0 2.2 2.4e-79 266.8 2.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4049) PLU-1 PF08429.11 NODE_46327_length_419_cov_2.177083_g38519_i0reverse_frame_3 - 0.006 15.8 1.1 0.006 15.8 1.1 1.4 2 0 0 2 2 2 1 PLU-1-like protein DUF1415 PF07209.12 NODE_46327_length_419_cov_2.177083_g38519_i0reverse_frame_3 - 0.017 14.9 0.7 0.028 14.2 0.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1415) PepX_N PF09168.10 NODE_46327_length_419_cov_2.177083_g38519_i0reverse_frame_3 - 0.068 13.6 1.3 0.16 12.3 0.8 1.8 1 1 1 2 2 2 0 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal Sugar_tr PF00083.24 NODE_46320_length_419_cov_2.531250_g38512_i0forward_frame_3 - 0.00023 20.1 0.4 0.00025 20.0 0.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_46320_length_419_cov_2.531250_g38512_i0forward_frame_3 - 0.0017 17.4 1.4 0.002 17.2 1.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TctA PF01970.16 NODE_46320_length_419_cov_2.531250_g38512_i0forward_frame_3 - 0.024 13.4 3.4 0.029 13.1 3.4 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family DUF2616 PF11077.8 NODE_46319_length_419_cov_2.583333_g38511_i0forward_frame_2 - 0.019 14.7 0.4 0.022 14.5 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2616) pXO2-34 PF17362.2 NODE_46318_length_419_cov_2.731771_g38510_i0reverse_frame_3 - 0.047 13.6 0.0 0.078 12.9 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function Molybdopterin PF00384.22 NODE_46318_length_419_cov_2.731771_g38510_i0reverse_frame_2 - 0.013 14.4 0.0 0.016 14.2 0.0 1.1 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Herpes_LP PF03363.13 NODE_46316_length_419_cov_3.127604_g38508_i0reverse_frame_3 - 0.089 12.6 5.5 0.052 13.3 3.2 1.7 1 1 0 1 1 1 0 Herpesvirus leader protein CvfB_WH PF17783.1 NODE_46310_length_419_cov_4.739583_g38502_i0forward_frame_3 - 0.092 12.6 1.1 0.092 12.6 1.1 1.6 1 1 0 1 1 1 0 CvfB-like winged helix domain Macoilin PF09726.9 NODE_46301_length_419_cov_57.953125_g38493_i0forward_frame_3 - 0.43 9.1 12.6 0.52 8.8 12.6 1.0 1 0 0 1 1 1 0 Macoilin family Podoplanin PF05808.11 NODE_46301_length_419_cov_57.953125_g38493_i0forward_frame_3 - 4.4 7.4 8.2 5.2 7.2 8.2 1.1 1 0 0 1 1 1 0 Podoplanin Nop53 PF07767.11 NODE_46301_length_419_cov_57.953125_g38493_i0forward_frame_2 - 0.019 14.3 14.5 0.024 14.1 14.5 1.1 1 0 0 1 1 1 0 Nop53 (60S ribosomal biogenesis) zf-C2H2_11 PF16622.5 NODE_46300_length_419_cov_64.468750_g38492_i0reverse_frame_2 - 0.052 13.3 1.3 0.083 12.7 1.3 1.3 1 0 0 1 1 1 0 zinc-finger C2H2-type zf-C2H2 PF00096.26 NODE_46300_length_419_cov_64.468750_g38492_i0reverse_frame_2 - 0.16 12.5 0.5 0.25 11.9 0.5 1.3 1 0 0 1 1 1 0 Zinc finger, C2H2 type Epsilon_antitox PF08998.11 NODE_46294_length_419_cov_74.817708_g38486_i0reverse_frame_2 - 0.012 15.9 0.7 0.019 15.2 0.7 1.3 1 0 0 1 1 1 0 Bacterial epsilon antitoxin HTH_Tnp_Tc5 PF03221.16 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.0016 18.4 0.0 0.0036 17.3 0.0 1.6 1 1 0 1 1 1 1 Tc5 transposase DNA-binding domain KAR PF15222.6 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.0032 17.7 0.0 0.27 11.5 0.0 2.1 1 1 1 2 2 2 1 Kidney androgen-regulated Syntaxin_2 PF14523.6 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.03 14.7 0.2 1.5 9.2 0.0 2.2 2 0 0 2 2 2 0 Syntaxin-like protein CotJB PF12652.7 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.16 12.2 0.2 0.45 10.8 0.2 1.7 1 1 1 2 2 2 0 CotJB protein Spore_YhaL PF14147.6 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.23 11.2 2.7 0.24 11.1 0.3 2.0 2 0 0 2 2 2 0 Sporulation protein YhaL BLOC1S3 PF15753.5 NODE_46284_length_419_cov_92.231771_g38476_i0forward_frame_2 - 0.041 14.0 1.7 0.053 13.7 1.7 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 PKD_channel PF08016.12 NODE_46278_length_419_cov_130.835938_g38470_i0forward_frame_2 - 0.18 10.5 0.0 0.23 10.1 0.0 1.1 1 0 0 1 1 1 0 Polycystin cation channel CytochromB561_N PF09786.9 NODE_46270_length_419_cov_285.705729_g38462_i0reverse_frame_2 - 0.46 9.4 3.2 0.52 9.2 3.2 1.1 1 0 0 1 1 1 0 Cytochrome B561, N terminal RasGEF PF00617.19 NODE_46270_length_419_cov_285.705729_g38462_i0forward_frame_2 - 0.019 15.2 0.8 0.24 11.6 0.3 2.0 1 1 1 2 2 2 0 RasGEF domain HAD_2 PF13419.6 NODE_46268_length_419_cov_309.697917_g38460_i0reverse_frame_2 - 0.062 13.4 0.0 0.095 12.8 0.0 1.3 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Ago_N_1 PF18351.1 NODE_46266_length_419_cov_576.666667_g38458_i0reverse_frame_2 - 0.19 12.2 0.0 0.24 11.8 0.0 1.2 1 0 0 1 1 1 0 Fungal Argonaute N-terminal domain Thrombin_light PF09396.10 NODE_46262_length_420_cov_1.651948_g38454_i0reverse_frame_2 - 0.045 13.5 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 Thrombin light chain SSL_OB PF09199.10 NODE_46255_length_420_cov_2.231169_g38447_i0reverse_frame_2 - 0.15 12.4 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 Staphylococcal superantigen-like OB-fold domain S-antigen PF05756.11 NODE_46252_length_420_cov_2.392208_g38444_i0reverse_frame_3 - 4.6 7.7 8.1 0.36 11.2 2.4 2.0 2 0 0 2 2 2 0 S-antigen protein SWIM PF04434.17 NODE_46250_length_420_cov_2.441558_g38442_i0forward_frame_3 - 4.2 7.1 5.6 3 7.6 0.0 2.3 2 0 0 2 2 2 0 SWIM zinc finger MTA_R1 PF17226.2 NODE_46250_length_420_cov_2.441558_g38442_i0forward_frame_2 - 0.078 13.1 1.4 0.16 12.1 1.4 1.5 1 0 0 1 1 1 0 MTA R1 domain Phage_hub_GP28 PF11110.8 NODE_46242_length_420_cov_3.451948_g38434_i0forward_frame_2 - 0.037 13.9 1.2 0.14 12.1 1.2 2.0 1 1 0 1 1 1 0 Baseplate hub distal subunit SIS PF01380.22 NODE_46241_length_420_cov_3.477922_g38433_i0reverse_frame_3 - 0.094 12.6 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 SIS domain adh_short PF00106.25 NODE_46241_length_420_cov_3.477922_g38433_i0reverse_frame_2 - 0.16 11.5 0.5 0.23 10.9 0.5 1.3 1 0 0 1 1 1 0 short chain dehydrogenase Phytochelatin_C PF09328.10 NODE_46235_length_420_cov_6.961039_g17334_i1forward_frame_2 - 0.041 13.2 0.3 0.05 12.9 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) Ribosomal_S17 PF00366.20 NODE_46228_length_420_cov_62.644156_g38421_i0reverse_frame_3 - 0.028 14.5 0.7 0.028 14.5 0.7 1.8 2 0 0 2 2 2 0 Ribosomal protein S17 LEAP-2 PF07359.11 NODE_46228_length_420_cov_62.644156_g38421_i0reverse_frame_2 - 0.11 12.3 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) FRD2 PF03197.13 NODE_46227_length_420_cov_65.997403_g38420_i0reverse_frame_2 - 0.015 15.6 0.6 0.036 14.4 0.0 1.9 1 1 1 2 2 2 0 Bacteriophage FRD2 protein YIEGIA PF14045.6 NODE_46221_length_420_cov_79.901299_g38414_i0reverse_frame_3 - 0.08 11.8 0.0 0.09 11.6 0.0 1.1 1 0 0 1 1 1 0 YIEGIA protein SEA PF01390.20 NODE_46221_length_420_cov_79.901299_g38414_i0reverse_frame_2 - 0.095 12.8 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 SEA domain Radial_spoke PF04712.12 NODE_46201_length_420_cov_168.890909_g38394_i0forward_frame_2 - 0.013 14.4 0.1 0.013 14.4 0.1 1.9 2 0 0 2 2 2 0 Radial spokehead-like protein Prion PF00377.18 NODE_46198_length_420_cov_207.766234_g38391_i0forward_frame_3 - 5.6 6.9 7.6 2.7 7.9 1.1 2.2 1 1 1 2 2 2 0 Prion/Doppel alpha-helical domain BolA PF01722.18 NODE_46197_length_420_cov_208.612987_g38390_i0forward_frame_3 - 1.3e-19 70.3 0.2 1.7e-19 69.8 0.2 1.2 1 0 0 1 1 1 1 BolA-like protein Connexin PF00029.19 NODE_46195_length_420_cov_247.384416_g38388_i0reverse_frame_3 - 0.01 15.6 0.2 0.014 15.2 0.2 1.2 1 0 0 1 1 1 0 Connexin DUF5534 PF17686.1 NODE_46195_length_420_cov_247.384416_g38388_i0forward_frame_2 - 0.0025 18.1 0.0 0.0031 17.8 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5534) DUF443 PF04276.12 NODE_46195_length_420_cov_247.384416_g38388_i0forward_frame_2 - 0.011 15.5 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF443) SKG6 PF08693.10 NODE_46195_length_420_cov_247.384416_g38388_i0forward_frame_2 - 0.13 11.7 2.2 0.26 10.7 2.2 1.5 1 0 0 1 1 1 0 Transmembrane alpha-helix domain DUF1460 PF07313.12 NODE_46192_length_420_cov_256.020779_g38385_i0forward_frame_3 - 0.037 13.4 0.2 0.048 13.0 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1460) DUF5534 PF17686.1 NODE_46192_length_420_cov_256.020779_g38385_i0forward_frame_2 - 0.0028 17.9 0.0 0.0035 17.6 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5534) DUF443 PF04276.12 NODE_46192_length_420_cov_256.020779_g38385_i0forward_frame_2 - 0.012 15.4 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF443) Asp PF00026.23 NODE_46192_length_420_cov_256.020779_g38385_i0forward_frame_2 - 0.017 14.6 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic aspartyl protease SKG6 PF08693.10 NODE_46192_length_420_cov_256.020779_g38385_i0forward_frame_2 - 0.13 11.7 2.2 0.26 10.7 2.2 1.5 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Radial_spoke PF04712.12 NODE_46190_length_420_cov_319.740260_g38383_i0forward_frame_2 - 0.013 14.4 0.1 0.013 14.4 0.1 1.9 2 0 0 2 2 2 0 Radial spokehead-like protein DUF5479 PF17575.2 NODE_46188_length_420_cov_993.644156_g38381_i0forward_frame_2 - 0.028 15.0 0.1 0.038 14.5 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5479) COMPASS-Shg1 PF05205.12 NODE_46185_length_420_cov_3124.994805_g38379_i0reverse_frame_2 - 0.0042 17.8 0.4 0.0051 17.5 0.4 1.3 1 1 0 1 1 1 1 COMPASS (Complex proteins associated with Set1p) component shg1 EF-hand_7 PF13499.6 ORF97277 - 1.8e-15 57.1 1.0 8.1e-12 45.4 0.4 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF97277 - 1.2e-13 49.5 2.1 0.00043 19.6 0.2 3.6 3 1 1 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF97277 - 2.2e-13 49.0 2.2 0.0021 17.8 0.1 3.6 3 1 1 4 4 4 3 EF-hand domain EF-hand_8 PF13833.6 ORF97277 - 3.6e-07 29.9 3.3 2.2e-05 24.2 0.5 2.8 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF97277 - 1.1e-06 27.9 4.5 0.087 12.4 0.1 4.1 4 0 0 4 4 4 3 EF hand UBA PF00627.31 ORF97277 - 0.029 14.3 1.2 2.9 7.9 0.0 2.6 3 0 0 3 3 3 0 UBA/TS-N domain EF-hand_9 PF14658.6 ORF97277 - 0.059 13.7 0.0 15 6.0 0.0 2.4 2 1 0 2 2 2 0 EF-hand domain EF-hand_4 PF12763.7 ORF97277 - 0.098 12.6 0.2 1.9 8.5 0.0 2.5 2 1 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand DUF3824 PF12868.7 ORF96685 - 0.018 15.7 0.0 0.022 15.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) SR-25 PF10500.9 ORF96685 - 0.63 9.6 10.1 0.77 9.3 10.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein TAFH PF07531.14 ORF95648 - 0.024 14.7 0.2 0.041 14.0 0.2 1.3 1 0 0 1 1 1 0 NHR1 homology to TAF Cyt-b5 PF00173.28 ORF95295 - 1e-22 80.0 0.0 1.1e-22 80.0 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain COE1_DBD PF16422.5 ORF95288 - 0.0082 15.6 0.1 0.011 15.2 0.1 1.2 1 0 0 1 1 1 1 Transcription factor COE1 DNA-binding domain RR_TM4-6 PF06459.12 ORF95282 - 4.7 6.9 12.0 5.3 6.8 12.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 EOS1 PF12326.8 ORF94003 - 0.13 12.1 1.4 0.17 11.8 1.4 1.1 1 0 0 1 1 1 0 N-glycosylation protein Xan_ur_permease PF00860.20 ORF93761 - 2.9e-43 148.0 11.0 3.5e-43 147.8 11.0 1.0 1 0 0 1 1 1 1 Permease family DUF5423 PF17461.2 ORF93761 - 0.22 10.3 1.0 0.32 9.8 1.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Claudin_2 PF13903.6 ORF93761 - 9.9 5.9 7.4 37 4.0 7.0 1.9 1 1 2 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction Hamartin PF04388.12 ORF93277 - 9 4.8 9.5 9.5 4.7 9.5 1.0 1 0 0 1 1 1 0 Hamartin protein HHA PF05321.11 ORF93207 - 7e-33 112.7 0.3 9.8e-33 112.3 0.3 1.2 1 0 0 1 1 1 1 Haemolysin expression modulating protein Sars6 PF12133.8 ORF93207 - 5.3 7.0 5.8 0.94 9.4 0.3 2.4 2 1 1 3 3 3 0 Open reading frame 6 from SARS coronavirus MYO10_CC PF16735.5 ORF93165 - 0.12 12.5 3.8 2.8 8.1 0.1 2.4 2 1 0 2 2 2 0 Unconventional myosin-X coiled coil domain Trimer_CC PF08954.11 ORF93165 - 0.14 11.8 0.2 0.51 9.9 0.0 2.0 2 0 0 2 2 2 0 Trimerisation motif zinc_ribbon_6 PF14599.6 ORF91330 - 0.26 11.3 5.3 4.1 7.5 3.3 2.7 1 1 1 2 2 2 0 Zinc-ribbon zf-H2C2_2 PF13465.6 ORF91330 - 0.74 10.4 9.0 2.7 8.6 0.6 3.3 3 0 0 3 3 3 0 Zinc-finger double domain Mu-like_Com PF10122.9 ORF91330 - 3.8 7.0 6.7 0.13 11.8 0.6 1.7 2 0 0 2 2 2 0 Mu-like prophage protein Com YlaC PF10777.9 ORF89656 - 0.18 11.6 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 Inner membrane protein YlaC Sod_Cu PF00080.20 ORF89515 - 0.062 13.5 0.3 0.11 12.6 0.3 1.7 1 1 0 1 1 1 0 Copper/zinc superoxide dismutase (SODC) PP-binding PF00550.25 ORF89333 - 2.6e-06 27.7 0.1 3.9e-06 27.1 0.1 1.3 1 0 0 1 1 1 1 Phosphopantetheine attachment site Extensin_2 PF04554.13 ORF88609 - 0.58 10.3 7.6 1 9.5 7.6 1.4 1 1 0 1 1 1 0 Extensin-like region Peptidase_C97 PF05903.14 ORF88145 - 0.044 13.6 0.1 0.071 12.9 0.1 1.4 1 1 0 1 1 1 0 PPPDE putative peptidase domain zf-CCHC_6 PF15288.6 ORF87491 - 1.2 9.0 0.1 1.2 9.0 0.1 2.7 3 0 0 3 3 3 0 Zinc knuckle GST_C_6 PF17171.4 ORF87185 - 0.00024 20.8 0.1 0.00064 19.5 0.1 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain CRAL_TRIO_2 PF13716.6 ORF87185 - 0.013 15.6 0.5 0.018 15.2 0.5 1.3 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain DUF1298 PF06974.13 ORF86126 - 2.5e-05 24.3 0.0 3.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) PI_PP_I PF18363.1 ORF85990 - 0.0018 18.4 1.7 0.0025 18.0 1.7 1.3 1 0 0 1 1 1 1 Phosphoinositide phosphatase insertion domain DUF1835 PF08874.10 ORF85990 - 0.034 14.4 0.6 0.047 13.9 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1835) MAD PF05557.13 ORF85990 - 0.044 12.2 5.6 0.046 12.1 5.1 1.3 1 1 0 1 1 1 0 Mitotic checkpoint protein Herpes_UL79 PF03049.14 ORF85990 - 0.045 13.4 0.4 0.059 13.0 0.4 1.2 1 0 0 1 1 1 0 UL79 family CCDC32 PF14989.6 ORF85990 - 0.091 12.8 4.0 0.16 12.0 4.0 1.6 1 1 0 1 1 1 0 Coiled-coil domain containing 32 Bromodomain PF00439.25 ORF85990 - 0.15 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Bromodomain XhlA PF10779.9 ORF85990 - 0.19 11.9 1.2 0.25 11.6 0.1 1.7 2 0 0 2 2 2 0 Haemolysin XhlA Syntaxin-6_N PF09177.11 ORF85990 - 0.25 11.9 3.3 0.26 11.8 0.8 2.1 1 1 0 2 2 2 0 Syntaxin 6, N-terminal TMEM252 PF15664.5 ORF85474 - 0.11 12.2 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 252 family Myb_DNA-binding PF00249.31 ORF8508 - 4.7e-13 49.1 1.9 8e-11 42.0 0.4 2.4 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF8508 - 7.6e-12 45.3 2.2 1.3e-11 44.6 1.7 1.7 1 1 1 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 ORF8508 - 0.00039 20.6 3.1 0.022 14.9 0.7 2.2 1 1 1 2 2 2 2 SANT/Myb-like domain of DAMP1 SLIDE PF09111.10 ORF8508 - 0.0017 18.3 0.1 0.0024 17.9 0.1 1.3 1 0 0 1 1 1 1 SLIDE p25-alpha PF05517.12 ORF84256 - 0.0068 16.6 2.7 0.048 13.8 0.1 2.2 2 0 0 2 2 2 2 p25-alpha Pkinase PF00069.25 ORF83540 - 1e-47 162.7 0.1 1.1e-47 162.6 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83540 - 8.3e-25 87.5 0.0 9e-25 87.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF83540 - 5.3e-07 29.2 0.0 6.7e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF83540 - 9.7e-06 25.7 0.0 1.3e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF83540 - 0.00032 20.1 0.0 0.00037 19.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF83540 - 0.0046 15.8 0.0 0.0053 15.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase YrbL-PhoP_reg PF10707.9 ORF83540 - 0.04 13.4 0.0 0.05 13.1 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL RIO1 PF01163.22 ORF83540 - 0.14 11.8 0.1 0.16 11.6 0.1 1.2 1 0 0 1 1 1 0 RIO1 family SPT16 PF08644.11 ORF83142 - 0.097 12.8 0.4 0.14 12.4 0.4 1.2 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) API5 PF05918.11 ORF83142 - 1.7 7.4 5.1 1.9 7.2 5.1 1.0 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) Complex1_LYR_2 PF13233.6 ORF81712 - 0.57 11.0 4.0 1 10.2 4.0 1.7 1 1 0 1 1 1 0 Complex1_LYR-like PPR_2 PF13041.6 ORF81644 - 3.1e-09 36.9 0.0 4.5e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 PPR repeat family PPR_3 PF13812.6 ORF81644 - 3.5e-08 33.4 0.0 5.2e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 ORF81644 - 0.00017 21.6 0.0 0.003 17.7 0.0 2.3 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 ORF81644 - 0.00024 20.7 0.0 0.27 11.0 0.0 2.5 2 0 0 2 2 2 2 PPR repeat PPR_long PF17177.4 ORF81644 - 0.012 15.0 0.0 0.017 14.5 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP ADH_N PF08240.12 ORF81193 - 5.2e-05 23.1 0.0 0.00018 21.3 0.0 1.7 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain PI3K_p85B PF02192.16 ORF81101 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF81101 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 Histone PF00125.24 ORF8104 - 6.7e-52 175.3 3.3 7.4e-52 175.2 3.3 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 ORF8104 - 0.0001 22.6 0.1 0.00017 21.9 0.1 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF8104 - 0.00023 21.3 1.1 0.00025 21.1 0.2 1.6 2 0 0 2 2 2 1 Centromere kinetochore component CENP-T histone fold PAF PF15715.5 ORF8104 - 0.0015 19.2 1.3 0.0018 18.9 1.3 1.2 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CBFD_NFYB_HMF PF00808.23 ORF8104 - 0.0017 18.6 0.2 0.0034 17.6 0.2 1.5 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF8104 - 0.0027 17.7 0.1 0.0045 17.1 0.1 1.3 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit ArabFuran-catal PF09206.11 ORF808 - 3.5e-37 128.4 0.1 4.3e-37 128.1 0.1 1.1 1 0 0 1 1 1 1 Alpha-L-arabinofuranosidase B, catalytic Inhibitor_I42 PF09394.10 ORF80437 - 3.7e-15 56.1 0.0 6.1e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 RepA_C PF04796.12 ORF78622 - 0.068 13.2 0.2 0.094 12.7 0.2 1.4 1 1 0 1 1 1 0 Plasmid encoded RepA protein Pkinase PF00069.25 ORF78187 - 4.7e-25 88.5 0.0 5.4e-25 88.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78187 - 2.3e-14 53.3 0.0 2.6e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF78187 - 0.057 12.8 0.0 0.063 12.6 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family ArsA_ATPase PF02374.15 ORF78187 - 0.058 12.6 0.0 0.067 12.4 0.0 1.1 1 0 0 1 1 1 0 Anion-transporting ATPase Kinase-like PF14531.6 ORF78187 - 0.14 11.4 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Kinase-like BTK PF00779.19 ORF77949 - 0.023 14.5 0.1 0.045 13.6 0.1 1.5 1 0 0 1 1 1 0 BTK motif Asp PF00026.23 ORF77799 - 4.5e-10 39.5 0.1 5.8e-10 39.1 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF77799 - 0.00038 20.3 0.0 0.00049 19.9 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal EphA2_TM PF14575.6 ORF77799 - 0.014 16.2 0.0 0.02 15.7 0.0 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ECSCR PF15820.5 ORF77799 - 0.027 14.3 0.3 0.037 13.9 0.3 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Baculo_11_kDa PF06143.11 ORF77799 - 0.052 13.1 0.1 0.094 12.3 0.1 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family PDR_CDR PF06422.12 ORF77799 - 0.063 13.2 0.1 0.29 11.1 0.1 1.8 1 1 0 1 1 1 0 CDR ABC transporter ASFV_J13L PF05568.11 ORF77799 - 0.09 12.5 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 African swine fever virus J13L protein 4HB_MCP_1 PF12729.7 ORF77799 - 0.1 12.1 0.3 0.14 11.6 0.3 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction ODV-E18 PF10717.9 ORF77799 - 0.11 12.4 0.2 0.16 11.8 0.2 1.3 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Chitin_synth_2 PF03142.15 ORF77789 - 0.3 9.7 1.6 0.34 9.5 1.6 1.1 1 0 0 1 1 1 0 Chitin synthase Inhibitor_I42 PF09394.10 ORF77517 - 3.7e-15 56.1 0.0 6.1e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 HpcH_HpaI PF03328.14 ORF77370 - 1.3e-22 80.1 0.1 1.5e-22 79.9 0.1 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family AlkA_N PF06029.11 ORF77370 - 0.15 12.3 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 AlkA N-terminal domain Pkinase PF00069.25 ORF77261 - 4.8e-24 85.1 0.0 5.6e-24 84.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF77261 - 2.2e-22 79.6 0.0 2.5e-22 79.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF77261 - 0.00081 18.3 0.0 0.00092 18.1 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF77261 - 0.0022 17.3 0.0 0.0032 16.8 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF77261 - 0.0023 17.3 0.1 0.0034 16.8 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EcKinase PF02958.20 ORF77261 - 0.034 13.5 0.0 0.045 13.0 0.0 1.1 1 0 0 1 1 1 0 Ecdysteroid kinase APH PF01636.23 ORF77261 - 0.18 11.7 0.1 0.36 10.7 0.1 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family CoA_transf_3 PF02515.17 ORF77090 - 8.5e-29 100.8 0.0 9.4e-29 100.7 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III Peptidase_M50 PF02163.22 ORF76304 - 0.05 12.9 0.0 0.063 12.5 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M50 Methyltrn_RNA_2 PF04013.12 ORF75948 - 0.17 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Putative SAM-dependent RNA methyltransferase Fer4_3 PF12798.7 ORF75948 - 0.97 10.5 0.3 0.97 10.5 0.3 2.7 3 0 0 3 3 3 0 4Fe-4S binding domain Aconitase_2_N PF06434.13 ORF70572 - 0.012 15.3 0.1 0.012 15.2 0.1 1.1 1 0 0 1 1 1 0 Aconitate hydratase 2 N-terminus TRAP_alpha PF03896.16 ORF70293 - 0.31 10.2 2.2 0.38 9.9 2.2 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit KfrA_N PF11740.8 ORF70293 - 0.88 10.3 13.6 1.2 9.8 13.2 1.4 1 1 0 1 1 1 0 Plasmid replication region DNA-binding N-term Ribosomal_L28e PF01778.17 ORF70072 - 1.6e-15 57.8 0.3 1.6e-15 57.8 0.3 1.3 2 0 0 2 2 2 1 Ribosomal L28e protein family LZ_Tnp_IS66 PF13007.7 ORF68852 - 0.17 12.7 0.7 0.26 12.1 0.7 1.3 1 0 0 1 1 1 0 Transposase C of IS166 homeodomain TerC PF03741.16 ORF68207 - 9.7e-27 93.8 11.4 1.6e-26 93.1 7.3 2.0 2 0 0 2 2 2 1 Integral membrane protein TerC family DUF2070 PF09843.9 ORF68207 - 1.1 7.4 10.9 1.3 7.3 10.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF202 PF02656.15 ORF68207 - 1.5 9.3 5.5 4.3 7.9 5.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF202) PAP2 PF01569.21 ORF68207 - 3.4 7.4 9.3 2.8 7.7 8.0 1.4 1 1 0 1 1 1 0 PAP2 superfamily TMEM154 PF15102.6 ORF67867 - 1.5e-05 24.9 5.9 3.7e-05 23.7 5.9 1.6 1 1 0 1 1 1 1 TMEM154 protein family Podoplanin PF05808.11 ORF67867 - 0.00035 20.7 5.3 0.00048 20.3 5.3 1.1 1 0 0 1 1 1 1 Podoplanin DUF4199 PF13858.6 ORF67867 - 0.059 13.8 0.0 0.083 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) Insulin_TMD PF17870.1 ORF67867 - 0.069 13.2 2.1 0.1 12.7 2.1 1.2 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Cellulose_synt PF03552.14 ORF67867 - 0.069 11.6 0.8 0.085 11.3 0.8 1.1 1 0 0 1 1 1 0 Cellulose synthase DUF5305 PF17231.2 ORF67867 - 0.081 12.3 3.1 0.13 11.6 3.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5305) Sigma_reg_N PF13800.6 ORF67867 - 0.18 12.1 5.1 0.51 10.7 0.9 2.2 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Shisa PF13908.6 ORF67867 - 1.2 9.3 7.3 2.2 8.5 7.0 1.6 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator ATP-synt_C PF00137.21 ORF67844 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.9 2 0 0 2 2 2 1 ATP synthase subunit C Cupin_4 PF08007.12 ORF67208 - 1.5e-07 31.2 0.0 1.6e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF67208 - 3.4e-07 30.7 0.0 5.8e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_8 PF13621.6 ORF67208 - 1.2e-05 25.2 0.0 1.9e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Cupin-like domain Cupin_2 PF07883.11 ORF67208 - 0.00042 20.0 0.0 0.00079 19.1 0.0 1.4 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 ORF67208 - 0.15 11.7 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Cupin ATP-synt_C PF00137.21 ORF66493 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C DUF2730 PF10805.8 ORF65957 - 0.041 14.0 0.9 0.79 9.8 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) DUF648 PF04890.13 ORF65236 - 0.012 15.4 1.0 0.014 15.1 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF648) YlaC PF10777.9 ORF65195 - 0.18 11.6 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 Inner membrane protein YlaC Phage_integrase PF00589.22 ORF64934 - 5.2e-07 29.6 0.1 6.6e-07 29.3 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family DUF2521 PF10730.9 ORF64934 - 0.013 15.5 0.1 0.028 14.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2521) Mucin_bdg PF03272.13 ORF64928 - 0.0057 16.7 0.2 0.009 16.0 0.2 1.3 1 1 0 1 1 1 1 Putative mucin or carbohydrate-binding module PI_PP_I PF18363.1 ORF64461 - 0.0018 18.4 1.7 0.0025 18.0 1.7 1.3 1 0 0 1 1 1 1 Phosphoinositide phosphatase insertion domain DUF1835 PF08874.10 ORF64461 - 0.034 14.4 0.6 0.047 13.9 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1835) MAD PF05557.13 ORF64461 - 0.044 12.2 5.6 0.046 12.1 5.1 1.3 1 1 0 1 1 1 0 Mitotic checkpoint protein Herpes_UL79 PF03049.14 ORF64461 - 0.045 13.4 0.4 0.059 13.0 0.4 1.2 1 0 0 1 1 1 0 UL79 family CCDC32 PF14989.6 ORF64461 - 0.091 12.8 4.0 0.16 12.0 4.0 1.6 1 1 0 1 1 1 0 Coiled-coil domain containing 32 Bromodomain PF00439.25 ORF64461 - 0.15 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Bromodomain XhlA PF10779.9 ORF64461 - 0.19 11.9 1.2 0.25 11.6 0.1 1.7 2 0 0 2 2 2 0 Haemolysin XhlA Syntaxin-6_N PF09177.11 ORF64461 - 0.25 11.9 3.3 0.26 11.8 0.8 2.1 1 1 0 2 2 2 0 Syntaxin 6, N-terminal Sugar_tr PF00083.24 ORF64377 - 7.3e-26 91.0 16.0 8.1e-26 90.9 16.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF64377 - 0.018 14.0 23.5 0.093 11.6 9.3 2.0 1 1 1 2 2 2 0 Major Facilitator Superfamily EamA PF00892.20 ORF64377 - 0.02 15.1 19.3 0.011 15.9 17.9 1.3 1 1 0 1 1 1 0 EamA-like transporter family DUF4636 PF15468.6 ORF62731 - 0.0075 16.0 0.9 0.0098 15.6 0.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4636) RRM_1 PF00076.22 ORF62122 - 1.1e-08 34.8 0.0 2.1e-08 33.9 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) COE1_DBD PF16422.5 ORF62122 - 0.043 13.3 0.0 0.055 12.9 0.0 1.1 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain Sde2_N_Ubi PF13019.6 ORF61386 - 0.02 14.7 6.0 0.02 14.7 0.7 2.1 1 1 1 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain Sua5_yciO_yrdC PF01300.18 ORF60882 - 2.2e-28 98.9 0.0 2.5e-28 98.8 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination FlbD PF06289.11 ORF60882 - 0.033 13.8 0.3 0.074 12.7 0.3 1.5 1 0 0 1 1 1 0 Flagellar and Swarming motility proteins DnaJ_C PF01556.18 ORF60575 - 1.7e-24 86.6 0.5 1.9e-24 86.4 0.5 1.0 1 0 0 1 1 1 1 DnaJ C terminal domain PI3K_P85_iSH2 PF16454.5 ORF58737 - 0.14 11.8 1.7 0.17 11.4 1.7 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain P3A PF08727.11 ORF58074 - 0.0031 16.9 0.0 0.0071 15.7 0.0 1.6 1 0 0 1 1 1 1 Poliovirus 3A protein like zf_CCCH_4 PF18345.1 ORF57168 - 2.2e-09 37.1 11.9 4e-07 29.9 1.4 3.2 3 0 0 3 3 3 2 Zinc finger domain zf-CCCH PF00642.24 ORF57168 - 8.1e-09 35.2 5.7 1.2e-06 28.3 0.1 2.9 2 1 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF57168 - 1.3e-06 28.1 3.7 0.00027 20.7 0.2 2.9 3 0 0 3 3 3 2 CCCH-type zinc finger zf-CCCH_2 PF14608.6 ORF57168 - 1.5e-06 28.5 0.5 0.012 16.1 0.0 2.3 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Torus PF16131.5 ORF57168 - 1.3e-05 25.8 3.1 0.0034 18.0 0.2 2.1 1 1 0 2 2 2 2 Torus domain zf-CCCH_3 PF15663.5 ORF57168 - 2.1e-05 24.7 4.7 0.033 14.4 0.2 2.2 2 0 0 2 2 2 2 Zinc-finger containing family WYL_2 PF10902.8 ORF57112 - 0.012 16.0 0.4 0.033 14.5 0.4 1.7 1 0 0 1 1 1 0 WYL_2, Sm-like SH3 beta-barrel fold STAS PF01740.21 ORF56073 - 2.4e-05 23.9 0.0 3.3e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 STAS domain LPP20 PF02169.16 ORF55662 - 0.5 10.8 6.1 1.2 9.5 5.7 1.9 1 1 1 2 2 2 0 LPP20 lipoprotein DUF3159 PF11361.8 ORF54358 - 0.047 13.4 3.2 0.086 12.6 3.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3159) YlaC PF10777.9 ORF54087 - 0.18 11.6 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 Inner membrane protein YlaC CSN8_PSD8_EIF3K PF10075.9 ORF53123 - 7.3e-13 48.7 0.0 8.7e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family DMP12 PF16779.5 ORF53123 - 0.03 14.3 0.1 0.042 13.8 0.1 1.4 1 1 0 1 1 1 0 DNA-mimic protein Chlam_OMP6 PF03504.13 ORF53123 - 0.035 14.4 0.2 0.08 13.2 0.1 1.6 1 1 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 6 DUF3450 PF11932.8 ORF53123 - 0.04 13.2 0.0 0.05 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Pkinase PF00069.25 ORF5267 - 1e-47 162.7 0.1 1.1e-47 162.6 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF5267 - 8.3e-25 87.5 0.0 9e-25 87.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF5267 - 5.3e-07 29.2 0.0 6.7e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF5267 - 9.7e-06 25.7 0.0 1.3e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF5267 - 0.00032 20.1 0.0 0.00037 19.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF5267 - 0.0046 15.8 0.0 0.0053 15.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase YrbL-PhoP_reg PF10707.9 ORF5267 - 0.04 13.4 0.0 0.05 13.1 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL RIO1 PF01163.22 ORF5267 - 0.14 11.8 0.1 0.16 11.6 0.1 1.2 1 0 0 1 1 1 0 RIO1 family NESP55 PF06390.12 ORF52047 - 0.011 15.3 2.8 0.014 15.0 2.8 1.1 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) EF-hand_1 PF00036.32 ORF51970 - 2.9e-14 51.5 0.2 6.4e-06 25.4 0.1 2.5 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF51970 - 1.8e-13 49.2 0.3 1.9e-05 24.2 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF51970 - 3e-13 50.0 3.3 1.3e-09 38.4 0.3 1.9 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF51970 - 2.4e-11 42.6 0.4 1.6e-05 24.2 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF51970 - 4e-09 36.2 1.4 7.2e-05 22.6 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF51970 - 0.0023 18.2 0.0 0.0042 17.4 0.0 1.4 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF51970 - 0.013 15.8 0.0 0.021 15.1 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain Haemagg_act PF05860.13 ORF51970 - 0.021 14.7 0.0 0.026 14.4 0.0 1.1 1 0 0 1 1 1 0 haemagglutination activity domain DUF3215 PF11503.8 ORF51970 - 0.095 12.6 0.1 0.66 9.9 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3215) CoA_trans PF01144.23 ORF518 - 1.3e-21 77.0 0.1 1.9e-21 76.5 0.1 1.3 1 1 0 1 1 1 1 Coenzyme A transferase AcetylCoA_hyd_C PF13336.6 ORF518 - 4.5e-05 23.4 0.0 5.9e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Acetyl-CoA hydrolase/transferase C-terminal domain RCC1_2 PF13540.6 ORF51688 - 1.6e-10 40.5 3.4 0.011 15.5 0.0 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PI3K_p85B PF02192.16 ORF51494 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF51494 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 Myb_DNA-binding PF00249.31 ORF50841 - 4.7e-13 49.1 1.9 8e-11 42.0 0.4 2.4 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF50841 - 7.6e-12 45.3 2.2 1.3e-11 44.6 1.7 1.7 1 1 1 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 ORF50841 - 0.00039 20.6 3.1 0.022 14.9 0.7 2.2 1 1 1 2 2 2 2 SANT/Myb-like domain of DAMP1 SLIDE PF09111.10 ORF50841 - 0.0017 18.3 0.1 0.0024 17.9 0.1 1.3 1 0 0 1 1 1 1 SLIDE Myb_DNA-binding PF00249.31 ORF50556 - 4.7e-13 49.1 1.9 8e-11 42.0 0.4 2.4 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF50556 - 7.6e-12 45.3 2.2 1.3e-11 44.6 1.7 1.7 1 1 1 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 ORF50556 - 0.00039 20.6 3.1 0.022 14.9 0.7 2.2 1 1 1 2 2 2 2 SANT/Myb-like domain of DAMP1 SLIDE PF09111.10 ORF50556 - 0.0017 18.3 0.1 0.0024 17.9 0.1 1.3 1 0 0 1 1 1 1 SLIDE DUF3671 PF12420.8 ORF50371 - 0.16 12.0 0.0 0.16 12.0 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function HBB PF06777.11 ORF49007 - 0.07 12.8 0.1 0.2 11.3 0.0 1.6 2 0 0 2 2 2 0 Helical and beta-bridge domain ThiG PF05690.14 ORF4721 - 8e-61 205.5 4.3 8.9e-61 205.3 4.3 1.0 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 ORF4721 - 1.7e-05 24.4 0.1 2.4e-05 23.9 0.1 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.25 ORF4721 - 0.0013 17.8 1.4 0.0015 17.6 1.4 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 ORF4721 - 0.0023 17.0 0.6 0.0032 16.6 0.6 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NanE PF04131.14 ORF4721 - 0.0023 17.1 0.3 0.0031 16.7 0.2 1.3 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase NMO PF03060.15 ORF4721 - 0.057 12.8 2.2 0.062 12.7 2.2 1.1 1 0 0 1 1 1 0 Nitronate monooxygenase DUF5488 PF17590.2 ORF4721 - 0.51 10.1 1.6 4.2 7.2 0.1 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5488) PI_PP_I PF18363.1 ORF4595 - 0.0018 18.4 1.7 0.0025 18.0 1.7 1.3 1 0 0 1 1 1 1 Phosphoinositide phosphatase insertion domain DUF1835 PF08874.10 ORF4595 - 0.034 14.4 0.6 0.047 13.9 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1835) MAD PF05557.13 ORF4595 - 0.044 12.2 5.6 0.046 12.1 5.1 1.3 1 1 0 1 1 1 0 Mitotic checkpoint protein Herpes_UL79 PF03049.14 ORF4595 - 0.045 13.4 0.4 0.059 13.0 0.4 1.2 1 0 0 1 1 1 0 UL79 family CCDC32 PF14989.6 ORF4595 - 0.092 12.7 4.0 0.16 12.0 4.0 1.6 1 1 0 1 1 1 0 Coiled-coil domain containing 32 Bromodomain PF00439.25 ORF4595 - 0.15 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Bromodomain XhlA PF10779.9 ORF4595 - 0.19 11.9 1.2 0.25 11.6 0.1 1.7 2 0 0 2 2 2 0 Haemolysin XhlA Syntaxin-6_N PF09177.11 ORF4595 - 0.26 11.9 3.3 0.23 12.0 0.7 2.1 1 1 0 2 2 2 0 Syntaxin 6, N-terminal RRM_1 PF00076.22 ORF45753 - 4.1e-09 36.1 0.0 6.5e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF4389 PF14333.6 ORF45486 - 0.083 12.8 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4389) DUF452 PF04301.13 ORF45184 - 0.075 12.5 0.1 0.098 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF452) Fez1 PF06818.15 ORF45184 - 0.13 12.7 13.7 0.16 12.4 13.7 1.0 1 0 0 1 1 1 0 Fez1 CENP-H PF05837.12 ORF45184 - 0.44 11.0 13.9 0.072 13.5 7.5 2.3 1 1 1 2 2 2 0 Centromere protein H (CENP-H) PRKG1_interact PF15898.5 ORF45184 - 1.6 9.7 14.5 0.28 12.1 10.4 1.7 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain Not1 PF04054.15 ORF44850 - 1.5e-14 53.7 0.1 1.8e-14 53.5 0.1 1.0 1 0 0 1 1 1 1 CCR4-Not complex component, Not1 EF-hand_13 PF17958.1 ORF43501 - 3.2e-37 126.2 0.1 6.6e-37 125.2 0.1 1.5 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF43501 - 2.2e-10 40.9 7.1 1.7e-05 25.2 0.2 2.8 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF43501 - 2.4e-09 36.4 1.3 0.0053 16.6 0.4 3.6 3 1 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF43501 - 4.9e-09 35.9 1.2 0.00048 19.9 0.4 3.3 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF43501 - 5.4e-09 35.0 5.3 0.0037 16.7 0.1 3.9 4 0 0 4 4 4 2 EF hand EF-hand_5 PF13202.6 ORF43501 - 1.1e-05 24.7 1.4 0.0044 16.4 0.1 2.6 2 0 0 2 2 2 2 EF hand Sec34 PF04136.15 ORF43501 - 0.007 16.3 0.2 0.029 14.2 0.0 2.0 2 1 1 3 3 3 1 Sec34-like family Popeye PF04831.13 ORF43501 - 0.11 12.7 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Popeye protein conserved region Thioredoxin PF00085.20 ORF43086 - 0.00051 20.0 0.0 0.00063 19.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin LRRNT_2 PF08263.12 ORF43086 - 0.1 12.9 0.0 0.58 10.5 0.0 2.1 2 0 0 2 2 2 0 Leucine rich repeat N-terminal domain Neogenin_C PF06583.12 ORF41320 - 0.01 15.7 4.3 0.012 15.4 4.3 1.0 1 0 0 1 1 1 0 Neogenin C-terminus PI3K_p85B PF02192.16 ORF41278 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF41278 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 TMEM252 PF15664.5 ORF40100 - 0.11 12.2 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 252 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks163.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks163.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks163.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks163.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RabGAP-TBC PF00566.18 ORF39598 - 1.5e-11 44.4 4.6 1.5e-11 44.4 4.6 1.5 2 0 0 2 2 2 1 Rab-GTPase-TBC domain DUF1357 PF07094.11 ORF39598 - 0.0078 16.3 0.4 0.011 15.9 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1357) MSV199 PF10553.9 ORF39598 - 0.037 14.3 4.1 0.08 13.2 3.9 1.7 1 1 0 1 1 1 0 MSV199 domain DUF5336 PF17270.2 ORF39311 - 0.56 9.8 2.7 1 9.0 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5336) ATP-synt_C PF00137.21 ORF39028 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C RR_TM4-6 PF06459.12 ORF3869 - 4.7 6.9 12.0 5.3 6.8 12.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF1298 PF06974.13 ORF38415 - 2.5e-05 24.3 0.0 3.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) MORN PF02493.20 ORF38025 - 1.8e-15 55.8 18.8 2.7e-06 26.9 0.3 4.5 4 0 0 4 4 4 4 MORN repeat IPI_T4 PF11634.8 ORF38025 - 0.1 12.6 0.0 0.94 9.5 0.1 2.1 2 0 0 2 2 2 0 Nuclease inhibitor from bacteriophage T4 Methyltransf_16 PF10294.9 ORF37110 - 0.0048 16.7 0.0 0.0059 16.4 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase ATP-synt_C PF00137.21 ORF35362 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 2.0 2 0 0 2 2 2 1 ATP synthase subunit C FATC PF02260.20 ORF35292 - 8.9e-14 51.0 0.0 1.4e-13 50.4 0.0 1.3 1 0 0 1 1 1 1 FATC domain PI3_PI4_kinase PF00454.27 ORF35292 - 1.2e-08 35.1 0.0 1.8e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DnaJ_C PF01556.18 ORF35194 - 3.1e-24 85.8 0.6 3.4e-24 85.6 0.6 1.0 1 0 0 1 1 1 1 DnaJ C terminal domain CAP_N PF01213.19 ORF35030 - 0.035 13.6 4.8 0.049 13.1 4.8 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal LSM PF01423.22 ORF34263 - 7.2e-13 48.0 0.2 1.1e-12 47.5 0.2 1.3 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 ORF34263 - 0.14 11.9 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 Hfq protein RRM_1 PF00076.22 ORF34161 - 1.5e-14 53.5 0.0 3.2e-14 52.5 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF34161 - 0.061 13.2 0.0 0.092 12.6 0.0 1.3 1 0 0 1 1 1 0 Occluded RNA-recognition motif HBS1_N PF08938.10 ORF34161 - 0.28 11.5 2.1 6.5 7.1 0.0 2.3 2 0 0 2 2 2 0 HBS1 N-terminus PI3K_p85B PF02192.16 ORF34136 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF34136 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 PUF PF00806.19 ORF33554 - 0.099 12.4 0.1 6 6.8 0.0 2.5 2 0 0 2 2 2 0 Pumilio-family RNA binding repeat Asp PF00026.23 ORF3207 - 4.5e-10 39.5 0.1 5.8e-10 39.1 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF3207 - 0.00038 20.3 0.0 0.00049 19.9 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal EphA2_TM PF14575.6 ORF3207 - 0.014 16.2 0.0 0.02 15.7 0.0 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ECSCR PF15820.5 ORF3207 - 0.027 14.3 0.3 0.037 13.9 0.3 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Baculo_11_kDa PF06143.11 ORF3207 - 0.052 13.1 0.1 0.094 12.3 0.1 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family PDR_CDR PF06422.12 ORF3207 - 0.063 13.2 0.1 0.29 11.1 0.1 1.8 1 1 0 1 1 1 0 CDR ABC transporter ASFV_J13L PF05568.11 ORF3207 - 0.09 12.5 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 African swine fever virus J13L protein 4HB_MCP_1 PF12729.7 ORF3207 - 0.1 12.1 0.3 0.14 11.6 0.3 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction ODV-E18 PF10717.9 ORF3207 - 0.11 12.4 0.2 0.16 11.8 0.2 1.3 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 DnaJ PF00226.31 ORF30634 - 5.5e-14 52.0 0.0 8.2e-14 51.5 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain Pkinase PF00069.25 ORF30376 - 1.6e-18 67.0 0.2 1.8e-18 66.9 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30376 - 1.5e-15 57.2 0.2 1.7e-15 57.0 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Vwaint PF14624.6 ORF30170 - 0.0009 19.3 0.1 0.0014 18.7 0.1 1.3 1 0 0 1 1 1 1 VWA / Hh protein intein-like DUF4322 PF14210.6 ORF30170 - 0.066 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) DUF1612 PF07756.12 ORF29639 - 1.3 9.3 6.2 6.7 7.0 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1612) Pkinase PF00069.25 ORF29410 - 1.1e-10 41.4 0.0 1.3e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Rv2175c_C PF18367.1 ORF29410 - 0.054 13.6 0.2 0.085 13.0 0.2 1.3 1 0 0 1 1 1 0 Rv2175c C-terminal domain of unknown function CHDCT2 PF08074.11 ORF29194 - 0.52 10.5 2.6 4.1 7.5 0.2 2.1 1 1 1 2 2 2 0 CHDCT2 (NUC038) domain Bunya_G2 PF03563.13 ORF29015 - 0.057 12.7 0.0 0.093 12.0 0.0 1.4 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 DUF4468 PF14730.6 ORF27642 - 0.14 12.5 0.0 0.22 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold TPR_6 PF13174.6 ORF27642 - 0.55 11.0 2.4 0.67 10.7 0.5 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat GREB1 PF15782.5 ORF25241 - 6.4 3.7 12.8 6.6 3.7 12.8 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer DUF4468 PF14730.6 ORF25125 - 0.013 15.7 0.8 0.024 15.0 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold s48_45 PF07422.13 ORF25125 - 0.014 16.0 1.9 0.018 15.6 1.9 1.2 1 0 0 1 1 1 0 Sexual stage antigen s48/45 domain Suv3_N PF18114.1 ORF25125 - 0.024 14.7 1.6 3.4 7.8 1.3 2.6 2 1 0 2 2 2 0 Suv3 helical N-terminal domain DUF4441 PF14536.6 ORF25125 - 0.057 13.6 11.2 0.29 11.3 11.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) ubiquitin PF00240.23 ORF24862 - 0.00013 21.6 0.0 0.0002 21.0 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Profilin PF00235.19 ORF23838 - 8.6e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Profilin Ribos_L4_asso_C PF14374.6 ORF23758 - 7e-22 77.3 1.3 7e-22 77.3 1.3 2.1 3 0 0 3 3 3 1 60S ribosomal protein L4 C-terminal domain DUF4490 PF14892.6 ORF23758 - 0.0031 17.6 1.3 0.0061 16.6 1.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) BRE1 PF08647.11 ORF23758 - 2 8.5 14.2 1.1 9.4 10.2 2.4 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase GntR PF00392.21 ORF23153 - 0.0048 16.5 0.7 4.5 7.0 0.0 2.8 2 1 1 3 3 3 2 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 ORF23153 - 0.052 13.4 3.1 5.4 7.0 0.0 3.0 2 1 1 3 3 3 0 MarR family PI3K_p85B PF02192.16 ORF22803 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF22803 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 Sigma70_r3 PF04539.16 ORF22655 - 0.083 13.0 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 region 3 Macro PF01661.21 ORF22464 - 3.8e-16 59.2 0.0 5.6e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 Macro domain DUF3783 PF12646.7 ORF22464 - 0.0065 16.4 0.2 0.23 11.4 0.1 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF3783) Nebulin PF00880.18 ORF21886 - 0.036 14.0 2.4 0.15 12.0 2.4 2.2 1 0 0 1 1 1 0 Nebulin repeat SCO1-SenC PF02630.14 ORF21809 - 3.2e-24 85.4 0.1 5.2e-24 84.7 0.0 1.4 2 0 0 2 2 2 1 SCO1/SenC Acetyltransf_11 PF13720.6 ORF21809 - 0.0083 16.6 0.0 0.015 15.7 0.0 1.6 1 1 0 1 1 1 1 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF560 PF04575.13 ORF21439 - 0.037 13.5 0.2 0.044 13.2 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF560) RR_TM4-6 PF06459.12 ORF21147 - 4.7 6.9 12.0 5.3 6.8 12.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 IES5 PF17335.2 ORF20823 - 0.015 15.6 0.2 0.026 14.8 0.1 1.6 2 0 0 2 2 2 0 Ino80 complex subunit 5 ATP-synt_C PF00137.21 ORF20590 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C Rieske_2 PF13806.6 ORF2054 - 5.8e-20 71.2 0.0 7.9e-20 70.7 0.0 1.2 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain FKBP26_C PF18046.1 ORF2054 - 0.00097 19.2 0.0 0.0015 18.6 0.0 1.2 1 0 0 1 1 1 1 FKBP26_C-terminal Virulence_fact PF13769.6 ORF2054 - 0.086 13.1 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Virulence factor Rieske PF00355.26 ORF2054 - 0.14 12.1 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain Lipase_3 PF01764.25 ORF19564 - 7.8e-13 48.5 0.1 1.1e-12 48.1 0.1 1.2 1 0 0 1 1 1 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF19564 - 0.0025 17.1 0.0 0.0029 16.9 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF19564 - 0.0046 16.5 0.0 0.0048 16.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_5 PF12695.7 ORF19564 - 0.0047 16.7 0.0 0.0066 16.2 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF19564 - 0.0091 16.1 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_1 PF00561.20 ORF19564 - 0.15 11.7 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Ank_2 PF12796.7 ORF19050 - 3.4e-09 37.2 0.1 4.7e-09 36.7 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF19050 - 7.9e-08 32.7 0.6 1.4e-07 31.9 0.6 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF19050 - 6.2e-07 29.2 0.2 0.006 17.0 0.1 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF19050 - 1.8e-05 24.9 1.5 0.0031 17.8 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF19050 - 0.0029 18.0 1.9 0.24 11.9 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat ATP-grasp_4 PF13535.6 ORF19050 - 0.16 11.6 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain Peptidase_S24 PF00717.23 ORF18882 - 7.8e-12 45.0 0.0 1.1e-11 44.5 0.0 1.3 1 0 0 1 1 1 1 Peptidase S24-like HMG_CoA_synt_C PF08540.10 ORF18777 - 6.9e-31 107.9 0.0 7.7e-31 107.7 0.0 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_C PF08540.10 ORF18032 - 6.9e-31 107.9 0.0 7.7e-31 107.7 0.0 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal PHD_4 PF16866.5 ORF17850 - 0.0053 16.8 1.3 0.011 15.9 1.3 1.5 1 0 0 1 1 1 1 PHD-finger zf-H2C2_5 PF13909.6 ORF17430 - 0.096 12.5 0.2 0.18 11.6 0.2 1.4 1 0 0 1 1 1 0 C2H2-type zinc-finger domain Pkinase PF00069.25 ORF16227 - 6.2e-16 58.6 0.0 7.4e-16 58.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF16227 - 1.6e-15 57.1 0.0 1.7e-15 57.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF16032 - 1e-47 162.7 0.1 1.1e-47 162.6 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF16032 - 8.3e-25 87.5 0.0 9e-25 87.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF16032 - 5.3e-07 29.2 0.0 6.7e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF16032 - 9.7e-06 25.7 0.0 1.3e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF16032 - 0.00032 20.1 0.0 0.00037 19.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF16032 - 0.0046 15.8 0.0 0.0053 15.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase YrbL-PhoP_reg PF10707.9 ORF16032 - 0.04 13.4 0.0 0.05 13.1 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL RIO1 PF01163.22 ORF16032 - 0.14 11.8 0.1 0.16 11.6 0.1 1.2 1 0 0 1 1 1 0 RIO1 family ATP-synt_C PF00137.21 ORF15024 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C Methyltransf_3 PF01596.17 ORF14734 - 1.4e-05 24.4 0.0 1.8e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF14734 - 2.2e-05 25.4 0.0 2.8e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain p25-alpha PF05517.12 ORF14648 - 0.0068 16.6 2.7 0.048 13.8 0.1 2.2 2 0 0 2 2 2 2 p25-alpha LRR_5 PF13306.6 ORF14511 - 0.027 14.4 3.6 3.7 7.5 0.1 1.9 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) N_formyltrans_C PF18216.1 ORF14379 - 0.0047 16.6 0.0 0.0072 16.0 0.0 1.2 1 0 0 1 1 1 1 N-formyltransferase dimerization C-terminal domain EamA PF00892.20 ORF1324 - 4.9e-15 55.9 5.7 5.6e-15 55.7 5.7 1.1 1 0 0 1 1 1 1 EamA-like transporter family TPT PF03151.16 ORF1324 - 6.7e-05 22.4 2.1 7.6e-05 22.2 2.1 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family RseC_MucC PF04246.12 ORF1324 - 0.023 14.6 0.3 0.034 14.1 0.3 1.3 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF3481 PF11980.8 ORF1324 - 0.13 12.0 0.9 0.55 10.0 0.6 2.2 2 1 0 2 2 2 0 C-terminal domain of neuropilin glycoprotein ATP-synt_C PF00137.21 ORF13199 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C UMPH-1 PF05822.12 ORF13125 - 9.5e-16 58.0 4.9 1.1e-15 57.8 4.9 1.1 1 0 0 1 1 1 1 Pyrimidine 5'-nucleotidase (UMPH-1) LigB PF02900.18 ORF13125 - 0.11 11.5 0.3 0.88 8.6 0.0 1.9 1 1 1 2 2 2 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase UPF0731 PF14982.6 ORF13078 - 0.15 12.3 6.1 1.8 8.8 0.2 2.3 1 1 1 2 2 2 0 UPF0731 family Ank_5 PF13857.6 ORF12711 - 9.8e-20 70.4 1.0 3.2e-09 36.9 0.2 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF12711 - 3.3e-18 65.8 5.3 2.6e-09 37.5 0.8 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF12711 - 3.8e-18 65.8 1.0 1e-13 51.6 0.2 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF12711 - 2.2e-12 46.0 0.1 0.00063 20.0 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF12711 - 2.8e-12 46.5 1.3 1.1e-05 25.7 0.0 3.5 4 0 0 4 4 4 3 Ankyrin repeat Herpes_BLRF2 PF05812.12 ORF11643 - 0.0015 18.6 0.7 0.0021 18.2 0.1 1.6 2 0 0 2 2 2 1 Herpesvirus BLRF2 protein Prefoldin_3 PF13758.6 ORF11643 - 0.024 14.7 2.7 0.17 12.0 0.4 2.2 1 1 1 2 2 2 0 Prefoldin subunit ADIP PF11559.8 ORF11643 - 0.025 14.6 6.8 1.1 9.4 2.0 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DUF2203 PF09969.9 ORF11643 - 0.1 13.3 0.6 0.15 12.8 0.6 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) PRKG1_interact PF15898.5 ORF11643 - 0.1 13.5 6.1 0.094 13.6 5.0 1.5 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DUF3450 PF11932.8 ORF11643 - 0.11 11.7 5.2 0.19 11.0 4.6 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) JHBP PF06585.11 ORF11643 - 0.14 11.3 3.4 0.088 12.0 0.6 1.9 1 1 1 2 2 2 0 Haemolymph juvenile hormone binding protein (JHBP) FapA PF03961.13 ORF11643 - 0.18 10.4 8.2 0.21 10.2 8.2 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Cas6b_C PF17262.2 ORF11643 - 0.2 11.8 5.0 0.056 13.6 1.2 1.9 1 1 1 2 2 2 0 Cas6b C-terminal domain APG6_N PF17675.1 ORF11643 - 0.24 11.9 7.0 0.32 11.5 7.0 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region O-antigen_lig PF13425.6 ORF11643 - 4.3 6.0 5.4 4.5 5.9 5.4 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF1298 PF06974.13 ORF112575 - 2.5e-05 24.3 0.0 3.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) DUF2107 PF09880.9 ORF111465 - 0.094 12.8 0.7 0.25 11.5 0.1 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2107) TMEM252 PF15664.5 ORF111385 - 0.11 12.2 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 252 family Rubis-subs-bind PF09273.11 ORF109577 - 0.00021 22.0 1.1 0.00026 21.7 1.1 1.2 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding NOA36 PF06524.12 ORF108715 - 0.0016 17.8 2.6 0.0017 17.8 2.6 1.1 1 0 0 1 1 1 1 NOA36 protein Astro_capsid_p PF12226.8 ORF108715 - 3 6.9 5.7 3.6 6.7 5.7 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Peptidase_M16_C PF05193.21 ORF108268 - 0.051 13.6 0.0 0.086 12.8 0.0 1.3 1 0 0 1 1 1 0 Peptidase M16 inactive domain GAGA PF09237.11 ORF108023 - 6.7 6.6 7.6 0.42 10.5 1.6 2.1 3 0 0 3 3 3 0 GAGA factor DUF1298 PF06974.13 ORF107200 - 2.6e-15 56.6 0.0 3.1e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) TrbH PF07283.11 ORF107104 - 0.056 13.6 0.0 0.075 13.2 0.0 1.3 1 0 0 1 1 1 0 Conjugal transfer protein TrbH Complex1_30kDa PF00329.19 ORF106461 - 0.089 13.4 0.0 0.11 13.1 0.0 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 30 Kd subunit COE1_DBD PF16422.5 ORF106426 - 0.0082 15.6 0.1 0.011 15.2 0.1 1.2 1 0 0 1 1 1 1 Transcription factor COE1 DNA-binding domain Radial_spoke PF04712.12 ORF106063 - 1.1e-14 54.2 0.2 1.2e-14 54.2 0.2 1.1 1 0 0 1 1 1 1 Radial spokehead-like protein PI3K_p85B PF02192.16 ORF105907 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF105907 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 Not1 PF04054.15 ORF104702 - 1.5e-14 53.7 0.1 1.8e-14 53.5 0.1 1.0 1 0 0 1 1 1 1 CCR4-Not complex component, Not1 FRP PF18032.1 ORF104439 - 0.034 14.8 0.7 0.19 12.3 0.6 1.9 1 1 1 2 2 2 0 Photoprotection regulator fluorescence recovery protein LAGLIDADG_3 PF14528.6 ORF103086 - 0.08 13.3 0.1 0.14 12.5 0.1 1.4 1 0 0 1 1 1 0 LAGLIDADG-like domain Asp PF00026.23 ORF102842 - 4.5e-10 39.5 0.1 5.8e-10 39.1 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF102842 - 0.00038 20.3 0.0 0.00049 19.9 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal EphA2_TM PF14575.6 ORF102842 - 0.014 16.2 0.0 0.02 15.7 0.0 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ECSCR PF15820.5 ORF102842 - 0.027 14.3 0.3 0.037 13.9 0.3 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Baculo_11_kDa PF06143.11 ORF102842 - 0.052 13.1 0.1 0.094 12.3 0.1 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family PDR_CDR PF06422.12 ORF102842 - 0.063 13.2 0.1 0.29 11.1 0.1 1.8 1 1 0 1 1 1 0 CDR ABC transporter ASFV_J13L PF05568.11 ORF102842 - 0.09 12.5 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 African swine fever virus J13L protein 4HB_MCP_1 PF12729.7 ORF102842 - 0.1 12.1 0.3 0.14 11.6 0.3 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction ODV-E18 PF10717.9 ORF102842 - 0.11 12.4 0.2 0.16 11.8 0.2 1.3 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Ras PF00071.22 ORF102203 - 0.0052 16.4 0.0 0.0078 15.8 0.0 1.2 1 0 0 1 1 1 1 Ras family Rieske_2 PF13806.6 ORF101026 - 5.8e-20 71.2 0.0 7.9e-20 70.7 0.0 1.2 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain FKBP26_C PF18046.1 ORF101026 - 0.00097 19.2 0.0 0.0015 18.6 0.0 1.2 1 0 0 1 1 1 1 FKBP26_C-terminal Virulence_fact PF13769.6 ORF101026 - 0.086 13.1 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Virulence factor Rieske PF00355.26 ORF101026 - 0.14 12.1 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain ATP-synt_C PF00137.21 ORF100704 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C Pkinase PF00069.25 ORF100020 - 1e-47 162.7 0.1 1.1e-47 162.6 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100020 - 8.3e-25 87.5 0.0 9e-25 87.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF100020 - 5.3e-07 29.2 0.0 6.7e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF100020 - 9.7e-06 25.7 0.0 1.3e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF100020 - 0.00032 20.1 0.0 0.00037 19.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF100020 - 0.0046 15.8 0.0 0.0053 15.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase YrbL-PhoP_reg PF10707.9 ORF100020 - 0.04 13.4 0.0 0.05 13.1 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL RIO1 PF01163.22 ORF100020 - 0.14 11.8 0.1 0.16 11.6 0.1 1.2 1 0 0 1 1 1 0 RIO1 family FAS_meander PF17951.1 NODE_46852_length_412_cov_1.994695_g39026_i0reverse_frame_1 - 0.066 13.0 1.0 0.1 12.4 1.0 1.2 1 0 0 1 1 1 0 Fatty acid synthase meander beta sheet domain Sgf11_N PF18519.1 NODE_46850_length_412_cov_2.063660_g39024_i0reverse_frame_1 - 0.0074 15.8 0.3 0.013 15.0 0.3 1.4 1 0 0 1 1 1 1 SAGA-associated factor 11 N-terminal domain Bunya_G2 PF03563.13 NODE_46845_length_412_cov_2.408488_g39019_i0forward_frame_1 - 0.18 11.0 5.7 0.24 10.6 5.7 1.3 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 Cytidylate_kin PF02224.18 NODE_46839_length_412_cov_2.726790_g39013_i0reverse_frame_1 - 0.08 12.7 0.2 0.11 12.2 0.2 1.1 1 0 0 1 1 1 0 Cytidylate kinase CTV_P6 PF06706.11 NODE_46839_length_412_cov_2.726790_g39013_i0reverse_frame_1 - 1.3 8.8 4.8 2.5 7.9 0.4 2.9 2 1 1 3 3 3 0 Citrus tristeza virus 6-kDa protein FAM124 PF15067.6 NODE_46836_length_412_cov_2.835544_g39010_i0reverse_frame_1 - 0.12 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 FAM124 family HicA_toxin PF07927.12 NODE_46835_length_412_cov_2.840849_g39009_i0forward_frame_1 - 1.8e-06 27.9 0.0 3.2e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, HicB_lk_antitox PF15919.5 NODE_46835_length_412_cov_2.840849_g39009_i0forward_frame_1 - 0.0013 18.8 0.1 0.0018 18.4 0.1 1.2 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF3593 PF12159.8 NODE_46828_length_412_cov_3.657825_g39002_i0reverse_frame_1 - 0.11 12.5 2.0 0.44 10.6 1.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3593) PDR_CDR PF06422.12 NODE_46828_length_412_cov_3.657825_g39002_i0reverse_frame_1 - 0.16 11.9 2.1 0.37 10.7 2.1 1.5 1 0 0 1 1 1 0 CDR ABC transporter zf_UBZ PF18439.1 NODE_46824_length_412_cov_35.169761_g38998_i0forward_frame_1 - 0.11 12.1 0.2 0.24 11.0 0.2 1.5 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger NapE PF06796.11 NODE_46819_length_412_cov_55.660477_g38994_i0forward_frame_1 - 4.6 6.8 9.4 37 3.9 6.6 2.3 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE ACOX PF01756.19 NODE_46792_length_412_cov_140.416446_g38967_i0forward_frame_1 - 2.7e-07 30.3 0.6 1.7e-06 27.7 0.6 1.8 1 1 0 1 1 1 1 Acyl-CoA oxidase zf_C2H2_6 PF18450.1 NODE_46777_length_413_cov_1.695767_g38954_i0reverse_frame_1 - 2.5 7.9 6.4 0.52 10.1 1.9 2.2 2 0 0 2 2 2 0 Zinc Finger domain DUF244 PF03112.14 NODE_46776_length_413_cov_1.753968_g38953_i0forward_frame_1 - 0.016 15.1 0.9 0.022 14.6 0.9 1.2 1 0 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF DNA_pol_D_N PF18018.1 NODE_46774_length_413_cov_1.880952_g38951_i0reverse_frame_1 - 0.74 9.9 4.9 0.1 12.7 0.9 1.6 2 0 0 2 2 2 0 DNA polymerase delta subunit OB-fold domain DUF1534 PF07551.11 NODE_46770_length_413_cov_2.455026_g38947_i0forward_frame_1 - 0.047 13.4 0.1 0.085 12.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1534) MNSV_P7B PF06692.11 NODE_46768_length_413_cov_2.534392_g38945_i0forward_frame_1 - 0.054 13.5 0.3 0.1 12.6 0.3 1.4 1 0 0 1 1 1 0 Melon necrotic spot virus P7B protein FXa_inhibition PF14670.6 NODE_46756_length_413_cov_57.198413_g38933_i0reverse_frame_1 - 0.22 11.8 1.7 0.39 11.0 1.7 1.4 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site RGCC PF15151.6 NODE_46756_length_413_cov_57.198413_g38933_i0reverse_frame_1 - 0.44 10.8 2.7 0.48 10.7 1.1 1.9 1 1 0 1 1 1 0 Response gene to complement 32 protein family DUF4588 PF15251.6 NODE_46750_length_413_cov_74.219577_g38927_i0forward_frame_1 - 0.024 14.4 0.2 0.027 14.2 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4588) Macro PF01661.21 NODE_46740_length_413_cov_96.140212_g38917_i0reverse_frame_1 - 3.5e-14 52.9 0.0 6.6e-14 52.0 0.0 1.4 1 0 0 1 1 1 1 Macro domain Flp1_like PF16982.5 NODE_46740_length_413_cov_96.140212_g38917_i0reverse_frame_1 - 0.071 12.5 2.1 0.58 9.6 0.8 2.3 2 0 0 2 2 2 0 Putative Flagellin, Flp1-like, domain Baculo_LEF-11 PF06385.12 NODE_46740_length_413_cov_96.140212_g38917_i0reverse_frame_1 - 0.11 13.1 3.3 0.85 10.2 0.6 2.2 1 1 1 2 2 2 0 Baculovirus LEF-11 protein RIX1 PF08167.12 NODE_46731_length_413_cov_111.841270_g38908_i0forward_frame_1 - 0.015 15.0 0.5 0.02 14.6 0.5 1.1 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis DUF2997 PF11211.8 NODE_46731_length_413_cov_111.841270_g38908_i0forward_frame_1 - 0.2 11.5 0.2 0.34 10.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) TIP41 PF04176.13 NODE_46731_length_413_cov_111.841270_g38908_i0forward_frame_1 - 0.46 9.9 1.6 0.57 9.6 1.6 1.2 1 0 0 1 1 1 0 TIP41-like family AAA_7 PF12775.7 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 1.2e-42 145.5 0.4 1.5e-42 145.2 0.4 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA PF00004.29 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.0025 18.2 0.0 0.0034 17.8 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.0027 17.7 0.0 0.0037 17.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ATPase PF06745.13 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.0035 16.7 0.0 0.0044 16.4 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_22 PF13401.6 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.0046 17.2 0.0 0.0064 16.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.0073 16.7 0.0 0.34 11.3 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain T2SSE PF00437.20 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.012 14.7 0.1 0.014 14.4 0.1 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF815 PF05673.13 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.046 12.9 0.1 0.15 11.2 0.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF815) TrwB_AAD_bind PF10412.9 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.051 12.5 0.0 0.065 12.1 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_14 PF13173.6 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.057 13.5 0.0 0.086 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.088 12.5 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 NODE_46729_length_413_cov_115.838624_g38906_i0forward_frame_1 - 0.11 12.2 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF3426 PF11906.8 NODE_46728_length_413_cov_116.185185_g38905_i0forward_frame_1 - 0.0014 18.8 0.0 0.0018 18.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3426) TEX12 PF15219.6 NODE_46717_length_413_cov_160.047619_g38895_i0forward_frame_1 - 0.012 15.9 0.0 0.016 15.5 0.0 1.3 1 0 0 1 1 1 0 Testis-expressed 12 SMC_ScpB PF04079.16 NODE_46705_length_413_cov_380.124339_g38883_i0forward_frame_1 - 0.05 13.2 0.5 0.078 12.6 0.5 1.3 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB UvrB_inter PF17757.1 NODE_46705_length_413_cov_380.124339_g38883_i0forward_frame_1 - 0.18 12.0 1.5 4 7.7 0.4 2.2 2 0 0 2 2 2 0 UvrB interaction domain Acyl-CoA_ox_N PF14749.6 NODE_46690_length_414_cov_1.915567_g38871_i0reverse_frame_1 - 1.6e-17 64.3 0.0 1.8e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Acyl-CoA_dh_N PF02771.16 NODE_46690_length_414_cov_1.915567_g38871_i0reverse_frame_1 - 0.0014 19.3 0.0 0.0021 18.7 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain DUF3418 PF11898.8 NODE_46687_length_414_cov_2.100264_g38868_i0forward_frame_1 - 5.8e-32 111.1 0.0 6.3e-32 111.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) ParE_toxin PF05016.15 NODE_46687_length_414_cov_2.100264_g38868_i0forward_frame_1 - 0.041 14.5 0.3 0.2 12.3 0.1 2.0 2 0 0 2 2 2 0 ParE toxin of type II toxin-antitoxin system, parDE SlyX PF04102.12 NODE_46687_length_414_cov_2.100264_g38868_i0forward_frame_1 - 0.11 13.2 0.2 0.29 11.8 0.0 1.7 2 0 0 2 2 2 0 SlyX MraZ PF02381.18 NODE_46686_length_414_cov_2.253298_g38867_i0reverse_frame_1 - 0.18 11.8 0.5 0.32 11.0 0.0 1.6 2 0 0 2 2 2 0 MraZ protein, putative antitoxin-like Macro PF01661.21 NODE_46681_length_414_cov_2.704485_g38862_i0reverse_frame_1 - 1.2e-09 38.3 0.1 1.5e-09 37.9 0.1 1.1 1 0 0 1 1 1 1 Macro domain Ins_beta PF03488.14 NODE_46681_length_414_cov_2.704485_g38862_i0reverse_frame_1 - 0.066 13.2 0.1 1.9 8.6 0.0 2.5 3 0 0 3 3 3 0 Nematode insulin-related peptide beta type NDUF_B8 PF05821.11 NODE_46679_length_414_cov_2.744063_g38860_i0reverse_frame_1 - 0.11 12.3 1.5 0.21 11.4 0.2 1.8 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) tRNA_anti-codon PF01336.25 NODE_46678_length_414_cov_3.058047_g38859_i0forward_frame_1 - 2.6e-16 59.3 0.0 3.7e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2 PF00152.20 NODE_46678_length_414_cov_3.058047_g38859_i0forward_frame_1 - 0.038 13.1 0.1 0.048 12.7 0.1 1.1 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) PP2C PF00481.21 NODE_46674_length_414_cov_11.403694_g38855_i0forward_frame_1 - 0.0013 18.4 0.1 0.0022 17.6 0.1 1.5 1 1 0 1 1 1 1 Protein phosphatase 2C Tenui_NCP PF04876.12 NODE_46674_length_414_cov_11.403694_g38855_i0forward_frame_1 - 0.016 14.8 1.1 0.43 10.1 0.2 2.2 1 1 1 2 2 2 0 Tenuivirus major non-capsid protein DUF4298 PF14131.6 NODE_46674_length_414_cov_11.403694_g38855_i0forward_frame_1 - 0.027 14.4 0.2 0.32 11.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) Myb_DNA-bind_7 PF15963.5 NODE_46671_length_414_cov_59.981530_g38852_i0forward_frame_1 - 0.023 14.6 0.2 0.036 14.0 0.2 1.2 1 0 0 1 1 1 0 Myb DNA-binding like DUF5423 PF17461.2 NODE_46668_length_414_cov_71.266491_g38849_i0reverse_frame_1 - 0.0015 17.5 0.0 0.0018 17.2 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5423) MT-A70 PF05063.14 NODE_46655_length_414_cov_136.535620_g38837_i0forward_frame_1 - 1.2e-17 64.3 0.0 1.5e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 MT-A70 CpXC PF14353.6 NODE_46651_length_414_cov_178.778364_g38833_i0reverse_frame_1 - 0.015 15.3 0.6 4.8 7.2 0.3 2.2 2 0 0 2 2 2 0 CpXC protein Anti-TRAP PF15777.5 NODE_46651_length_414_cov_178.778364_g38833_i0reverse_frame_1 - 0.019 14.9 1.3 4.8 7.2 0.3 2.3 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF2752 PF10825.8 NODE_46651_length_414_cov_178.778364_g38833_i0reverse_frame_1 - 0.04 14.0 7.5 0.18 11.9 1.4 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2752) Zn_Tnp_IS1595 PF12760.7 NODE_46651_length_414_cov_178.778364_g38833_i0reverse_frame_1 - 0.79 9.7 8.4 1.8 8.6 0.3 3.3 3 2 1 4 4 4 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 NODE_46651_length_414_cov_178.778364_g38833_i0reverse_frame_1 - 2.4 8.4 6.5 5.1 7.3 1.0 2.8 3 1 0 3 3 3 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 NODE_46651_length_414_cov_178.778364_g38833_i0reverse_frame_1 - 7 6.3 6.2 12 5.5 0.1 2.6 3 0 0 3 3 3 0 TFIIB zinc-binding DUF1664 PF07889.12 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.0029 17.7 9.7 0.0035 17.4 8.8 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) G10 PF01125.17 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.038 13.7 2.3 0.047 13.5 2.3 1.3 1 0 0 1 1 1 0 G10 protein HAUS-augmin3 PF14932.6 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.085 12.4 9.2 0.1 12.1 9.2 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Laminin_II PF06009.12 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.087 12.8 5.8 0.069 13.2 4.4 1.5 1 1 0 1 1 1 0 Laminin Domain II HMMR_N PF15905.5 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.13 11.7 12.8 0.16 11.4 12.8 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF4200 PF13863.6 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.15 12.5 12.3 0.12 12.8 10.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) V_ATPase_I PF01496.19 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.3 9.0 6.6 0.32 8.9 6.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Prominin PF05478.11 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.36 8.7 7.3 0.43 8.5 7.3 1.1 1 0 0 1 1 1 0 Prominin Jnk-SapK_ap_N PF09744.9 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.39 10.9 13.6 1.7 8.9 9.4 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 LMBR1 PF04791.16 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.5 9.2 6.3 0.49 9.2 6.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF3450 PF11932.8 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.53 9.5 8.8 0.67 9.2 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ZYG-11_interact PF05884.12 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.67 9.3 2.2 0.75 9.2 2.2 1.1 1 0 0 1 1 1 0 Interactor of ZYG-11 PRCC PF10253.9 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.69 10.7 5.6 0.86 10.4 5.6 1.1 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting Cep57_CLD_2 PF14197.6 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.86 9.7 8.9 2.8 8.1 0.7 2.7 2 1 0 3 3 3 0 Centrosome localisation domain of PPC89 DUF4407 PF14362.6 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 1.5 8.1 5.1 1.7 7.9 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 2.2 7.5 8.6 2.5 7.2 8.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein Cgr1 PF03879.14 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 2.7 8.4 10.6 1.7 9.0 8.0 1.8 1 1 1 2 2 2 0 Cgr1 family bZIP_1 PF00170.21 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 5.6 7.1 9.3 1.1 9.4 3.0 2.7 2 1 1 3 3 3 0 bZIP transcription factor DUF948 PF06103.11 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 7.8 6.8 6.0 22 5.4 6.0 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Exo84_C PF16528.5 NODE_46647_length_414_cov_323.087071_g38829_i0forward_frame_1 - 3 7.6 5.2 3.6 7.4 5.2 1.1 1 0 0 1 1 1 0 Exocyst component 84 C-terminal Ribosomal_S14 PF00253.21 NODE_46638_length_414_cov_3151.435356_g38821_i0forward_frame_1 - 1.5e-11 43.9 4.0 7.1e-11 41.7 1.4 2.2 1 1 1 2 2 2 2 Ribosomal protein S14p/S29e TMEM132D_C PF15706.5 NODE_46637_length_415_cov_1.321053_g38820_i0reverse_frame_2 - 1 9.2 2.9 2.8 7.8 2.4 1.8 1 1 1 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term LRR19-TM PF15176.6 NODE_46637_length_415_cov_1.321053_g38820_i0forward_frame_2 - 0.033 14.2 0.4 0.05 13.6 0.4 1.2 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain U62_UL91 PF17442.2 NODE_46636_length_415_cov_1.768421_g38819_i0reverse_frame_2 - 0.14 12.1 0.3 0.48 10.4 0.0 1.8 2 0 0 2 2 2 0 Functional domain of U62 and UL91 proteins Toxin_15 PF07906.13 NODE_46635_length_415_cov_1.847368_g38818_i0reverse_frame_2 - 8.4e-12 45.3 0.1 1.5e-11 44.4 0.0 1.4 2 0 0 2 2 2 1 ShET2 enterotoxin, N-terminal region DUF4018 PF13210.6 NODE_46635_length_415_cov_1.847368_g38818_i0reverse_frame_2 - 0.13 12.1 0.2 0.17 11.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) BORCS6 PF10157.9 NODE_46634_length_415_cov_2.105263_g38817_i0reverse_frame_3 - 0.01 16.1 0.0 0.013 15.7 0.0 1.2 1 0 0 1 1 1 1 BLOC-1-related complex sub-unit 6 MerC PF03203.14 NODE_46633_length_415_cov_2.123684_g38816_i0forward_frame_2 - 1.2 9.6 8.3 0.44 11.0 3.8 2.3 2 1 0 2 2 2 0 MerC mercury resistance protein DUF2070 PF09843.9 NODE_46633_length_415_cov_2.123684_g38816_i0forward_frame_2 - 5.1 5.3 6.0 5.6 5.1 6.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DHHC PF01529.20 NODE_46633_length_415_cov_2.123684_g38816_i0forward_frame_2 - 7.2 6.7 9.6 1.1 9.3 4.9 1.8 2 0 0 2 2 2 0 DHHC palmitoyltransferase Microvir_J PF04726.13 NODE_46630_length_415_cov_2.450000_g38813_i0reverse_frame_3 - 1.2 9.1 6.3 13 5.9 0.3 2.5 2 0 0 2 2 2 0 Microvirus J protein DUF5378 PF17349.2 NODE_46629_length_415_cov_2.468421_g38812_i0reverse_frame_3 - 0.082 12.2 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5378) INT_SG_DDX_CT_C PF15300.6 NODE_46629_length_415_cov_2.468421_g38812_i0forward_frame_3 - 0.05 13.4 0.0 0.81 9.5 0.0 2.1 2 0 0 2 2 2 0 INTS6/SAGE1/DDX26B/CT45 C-terminus EIIC-GAT PF03611.14 NODE_46628_length_415_cov_2.489474_g38811_i0forward_frame_3 - 2.1e-33 116.0 12.4 2.3e-33 115.9 12.4 1.0 1 0 0 1 1 1 1 PTS system sugar-specific permease component DUF347 PF03988.12 NODE_46628_length_415_cov_2.489474_g38811_i0forward_frame_3 - 0.42 10.8 5.4 0.17 12.1 1.7 2.2 2 0 0 2 2 2 0 Repeat of Unknown Function (DUF347) Orthopox_A36R PF05950.11 NODE_46622_length_415_cov_2.805263_g38805_i0forward_frame_3 - 0.018 15.2 1.1 0.024 14.8 1.1 1.3 1 0 0 1 1 1 0 Orthopoxvirus A36R protein zf-RING_UBOX PF13445.6 NODE_46621_length_415_cov_2.836842_g38804_i0forward_frame_3 - 0.38 10.8 4.0 0.8 9.8 4.0 1.5 1 0 0 1 1 1 0 RING-type zinc-finger RHS PF03527.14 NODE_46619_length_415_cov_3.044737_g38802_i0reverse_frame_3 - 2.4e-08 33.6 0.3 5.3e-08 32.5 0.3 1.6 1 0 0 1 1 1 1 RHS protein OCRE PF17780.1 NODE_46619_length_415_cov_3.044737_g38802_i0reverse_frame_3 - 0.034 14.2 2.8 0.034 14.2 2.8 2.0 2 1 0 2 2 2 0 OCRE domain Glucokinase PF02685.16 NODE_46617_length_415_cov_3.207895_g38800_i0forward_frame_2 - 1.1e-28 100.2 0.0 1.2e-28 100.0 0.0 1.0 1 0 0 1 1 1 1 Glucokinase Pox_mRNA-cap PF03341.13 NODE_46616_length_415_cov_3.360526_g38799_i0forward_frame_3 - 0.0015 17.9 0.1 0.002 17.5 0.1 1.2 1 0 0 1 1 1 1 Poxvirus mRNA capping enzyme, small subunit DUF3341 PF11821.8 NODE_46616_length_415_cov_3.360526_g38799_i0forward_frame_3 - 0.089 12.4 0.0 0.17 11.5 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3341) MFS_1 PF07690.16 NODE_46614_length_415_cov_4.184211_g38797_i0reverse_frame_2 - 1.6e-05 24.0 0.5 1.6e-05 24.0 0.5 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily ABC-3 PF00950.17 NODE_46614_length_415_cov_4.184211_g38797_i0reverse_frame_2 - 0.0019 17.7 0.4 0.0023 17.5 0.4 1.1 1 0 0 1 1 1 1 ABC 3 transport family Metaviral_G PF09595.10 NODE_46614_length_415_cov_4.184211_g38797_i0reverse_frame_2 - 0.18 11.8 0.2 0.23 11.5 0.2 1.1 1 0 0 1 1 1 0 Metaviral_G glycoprotein BST2 PF16716.5 NODE_46614_length_415_cov_4.184211_g38797_i0forward_frame_3 - 0.031 14.8 0.4 0.049 14.2 0.4 1.3 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 zf-H2C2_2 PF13465.6 NODE_46612_length_415_cov_6.463158_g38795_i0forward_frame_3 - 1e-06 28.9 8.9 0.01 16.3 0.8 2.7 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_46612_length_415_cov_6.463158_g38795_i0forward_frame_3 - 0.0029 18.0 1.4 0.0029 18.0 1.4 3.3 4 0 0 4 4 4 2 Zinc finger, C2H2 type PyrI_C PF02748.15 NODE_46612_length_415_cov_6.463158_g38795_i0forward_frame_3 - 0.058 13.3 1.3 1.6 8.7 0.3 2.3 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2H2_4 PF13894.6 NODE_46612_length_415_cov_6.463158_g38795_i0forward_frame_3 - 0.21 12.5 0.5 0.21 12.5 0.5 3.5 4 0 0 4 4 4 0 C2H2-type zinc finger SHOCT PF09851.9 NODE_46611_length_415_cov_46.592105_g38794_i0reverse_frame_3 - 0.19 11.5 0.1 0.19 11.5 0.1 2.1 2 0 0 2 2 2 0 Short C-terminal domain PTPRCAP PF15713.5 NODE_46609_length_415_cov_60.021053_g38792_i0forward_frame_3 - 0.019 15.2 10.2 0.021 15.1 10.2 1.1 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated CobT PF06213.12 NODE_46609_length_415_cov_60.021053_g38792_i0forward_frame_3 - 8.3 5.7 17.6 42 3.4 0.0 2.0 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT Ydc2-catalyt PF09159.10 NODE_46605_length_415_cov_69.281579_g38788_i0reverse_frame_2 - 0.041 13.6 0.4 0.11 12.3 0.0 1.7 2 0 0 2 2 2 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 CENP-T_C PF15511.6 NODE_46601_length_415_cov_77.139474_g38784_i0reverse_frame_3 - 2.4e-08 34.1 0.0 3.8e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TAF PF02969.17 NODE_46601_length_415_cov_77.139474_g38784_i0reverse_frame_3 - 0.00022 21.3 0.5 0.0019 18.3 0.1 2.3 2 1 0 2 2 2 1 TATA box binding protein associated factor (TAF) CBFD_NFYB_HMF PF00808.23 NODE_46601_length_415_cov_77.139474_g38784_i0reverse_frame_3 - 0.00069 19.8 0.0 0.0021 18.3 0.0 1.9 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 NODE_46601_length_415_cov_77.139474_g38784_i0reverse_frame_3 - 0.0012 19.2 1.9 0.0013 19.1 0.1 1.9 2 0 0 2 2 2 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 NODE_46601_length_415_cov_77.139474_g38784_i0reverse_frame_3 - 0.0015 18.9 0.1 0.0025 18.2 0.1 1.4 1 1 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 NODE_46601_length_415_cov_77.139474_g38784_i0reverse_frame_3 - 0.013 15.5 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Bromo_TP PF07524.13 NODE_46601_length_415_cov_77.139474_g38784_i0reverse_frame_3 - 0.043 13.8 0.1 0.084 12.9 0.1 1.4 1 0 0 1 1 1 0 Bromodomain associated LSR PF05624.14 NODE_46598_length_415_cov_84.173684_g38781_i0forward_frame_3 - 1.5 8.9 12.9 0.23 11.5 6.0 2.3 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) Resistin PF06954.11 NODE_46595_length_415_cov_86.086842_g38778_i0forward_frame_3 - 1.9 9.1 8.9 0.84 10.2 4.2 2.2 1 1 1 2 2 2 0 Resistin GH3 PF03321.13 NODE_46595_length_415_cov_86.086842_g38778_i0forward_frame_2 - 5.6e-25 88.2 0.0 6.6e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 GH3 auxin-responsive promoter BCMA-Tall_bind PF09257.10 NODE_46593_length_415_cov_86.942105_g38776_i0forward_frame_3 - 4.2 7.6 9.8 13 5.9 2.5 3.1 3 0 0 3 3 3 0 BCMA, TALL-1 binding PTPLA PF04387.14 NODE_46590_length_415_cov_89.652632_g38773_i0forward_frame_2 - 0.11 12.2 1.0 0.14 11.8 1.0 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA TP53IP5 PF15331.6 NODE_46589_length_415_cov_98.142105_g38772_i0forward_frame_3 - 0.0036 17.5 0.2 0.0036 17.5 0.2 1.8 1 1 1 2 2 2 1 Cellular tumour antigen p53-inducible 5 PCIF1_WW PF12237.8 NODE_46589_length_415_cov_98.142105_g38772_i0forward_frame_2 - 1.8e-06 27.7 0.0 2.2e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Phosphorylated CTD interacting factor 1 WW domain Basic PF01586.16 NODE_46588_length_415_cov_102.110526_g38771_i0reverse_frame_3 - 0.037 15.2 0.1 0.096 13.9 0.0 1.7 2 0 0 2 2 2 0 Myogenic Basic domain zf-C2H2 PF00096.26 NODE_46587_length_415_cov_104.207895_g38770_i0reverse_frame_2 - 0.00017 21.9 0.6 0.00029 21.1 0.6 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_46587_length_415_cov_104.207895_g38770_i0reverse_frame_2 - 0.031 15.1 0.3 0.056 14.3 0.3 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_6 PF13912.6 NODE_46587_length_415_cov_104.207895_g38770_i0reverse_frame_2 - 0.048 13.7 0.1 0.084 12.9 0.1 1.4 1 0 0 1 1 1 0 C2H2-type zinc finger Ogr_Delta PF04606.12 NODE_46587_length_415_cov_104.207895_g38770_i0reverse_frame_2 - 0.089 12.8 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger DUF4473 PF14747.6 NODE_46587_length_415_cov_104.207895_g38770_i0reverse_frame_2 - 0.13 12.8 0.3 0.36 11.4 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4473) zf-C2HC_2 PF13913.6 NODE_46587_length_415_cov_104.207895_g38770_i0reverse_frame_2 - 0.16 11.9 0.1 0.33 10.9 0.1 1.5 1 0 0 1 1 1 0 zinc-finger of a C2HC-type FUSC PF04632.12 NODE_46586_length_415_cov_104.489474_g38769_i0reverse_frame_3 - 0.46 9.0 2.5 0.42 9.1 2.5 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family RCC1_2 PF13540.6 NODE_46586_length_415_cov_104.489474_g38769_i0forward_frame_2 - 0.00038 20.2 1.7 0.52 10.2 0.2 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Olduvai PF06758.13 NODE_46583_length_415_cov_119.578947_g38766_i0reverse_frame_2 - 0.025 14.8 0.6 0.04 14.2 0.6 1.3 1 0 0 1 1 1 0 Olduvai domain TspO_MBR PF03073.15 NODE_46582_length_415_cov_121.436842_g38765_i0forward_frame_2 - 0.29 11.2 3.0 0.49 10.5 3.0 1.4 1 0 0 1 1 1 0 TspO/MBR family RCC1_2 PF13540.6 NODE_46581_length_415_cov_127.581579_g30845_i1forward_frame_2 - 1.9e-05 24.3 10.5 0.075 12.8 0.1 4.3 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_46581_length_415_cov_127.581579_g30845_i1forward_frame_2 - 0.02 15.0 1.0 16 5.6 0.0 3.0 2 1 1 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Lipocalin_7 PF14651.6 NODE_46581_length_415_cov_127.581579_g30845_i1forward_frame_2 - 1.2 9.1 3.9 5.3 7.0 0.6 2.6 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family RyR PF02026.16 NODE_46579_length_415_cov_139.786842_g38763_i0forward_frame_3 - 0.17 12.1 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 RyR domain ZapB PF06005.12 NODE_46568_length_415_cov_697.181579_g38752_i0reverse_frame_3 - 0.0046 17.4 5.4 0.0095 16.4 5.4 1.6 1 0 0 1 1 1 1 Cell division protein ZapB DUF1465 PF07323.12 NODE_46568_length_415_cov_697.181579_g38752_i0reverse_frame_3 - 0.034 14.0 0.7 0.043 13.7 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Phage_sheath_1C PF17482.2 NODE_46568_length_415_cov_697.181579_g38752_i0reverse_frame_3 - 0.038 14.0 1.7 1.1 9.2 0.5 2.2 2 1 0 2 2 2 0 Phage tail sheath C-terminal domain Osmo_CC PF08946.10 NODE_46568_length_415_cov_697.181579_g38752_i0reverse_frame_3 - 0.2 11.9 5.1 0.66 10.3 0.2 2.3 2 0 0 2 2 2 0 Osmosensory transporter coiled coil Deltaretro_Tax PF05599.11 NODE_46568_length_415_cov_697.181579_g38752_i0forward_frame_2 - 0.0082 16.6 0.0 0.016 15.7 0.0 1.4 1 0 0 1 1 1 1 Deltaretrovirus Tax protein Peptidase_M43 PF05572.13 NODE_46567_length_415_cov_1031.668421_g38751_i0forward_frame_3 - 0.16 11.9 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Pregnancy-associated plasma protein-A 7TM_GPCR_Srz PF10325.9 NODE_46566_length_415_cov_1426.405263_g38750_i0forward_frame_2 - 0.49 9.7 10.6 0.57 9.5 10.6 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srz BAH PF01426.18 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_3 - 0.24 11.3 0.7 0.4 10.6 0.7 1.3 1 0 0 1 1 1 0 BAH domain LicD PF04991.13 NODE_46561_length_416_cov_1.272966_g38746_i0forward_frame_3 - 0.083 13.0 0.2 0.11 12.6 0.2 1.2 1 0 0 1 1 1 0 LicD family YebF PF13995.6 NODE_46552_length_416_cov_2.435696_g38737_i0reverse_frame_3 - 1e-40 137.7 0.6 1.2e-40 137.4 0.6 1.1 1 0 0 1 1 1 1 YebF-like protein HATPase_c PF02518.26 NODE_46550_length_416_cov_2.477690_g38735_i0forward_frame_3 - 2.5e-10 40.8 0.0 3.2e-10 40.5 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 NODE_46550_length_416_cov_2.477690_g38735_i0forward_frame_2 - 5.8e-14 52.2 0.1 7e-14 52.0 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Zmiz1_N PF18028.1 NODE_46546_length_416_cov_2.787402_g38731_i0reverse_frame_3 - 0.1 12.9 0.0 0.18 12.1 0.0 1.4 1 0 0 1 1 1 0 Zmiz1 N-terminal tetratricopeptide repeat domain Transpeptidase PF00905.22 NODE_46541_length_416_cov_3.068241_g38726_i0reverse_frame_3 - 0.016 14.5 0.0 0.02 14.1 0.0 1.1 1 0 0 1 1 1 0 Penicillin binding protein transpeptidase domain Glyco_hydro_38N PF01074.22 NODE_46541_length_416_cov_3.068241_g38726_i0reverse_frame_2 - 2.2e-12 47.0 0.2 2.8e-12 46.6 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain hnRNP_Q_AcD PF18360.1 NODE_46541_length_416_cov_3.068241_g38726_i0forward_frame_3 - 0.12 12.3 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain Bac_export_2 PF01312.19 NODE_46540_length_416_cov_3.251969_g38725_i0forward_frame_3 - 0.12 11.5 6.5 0.092 11.9 5.5 1.2 1 1 0 1 1 1 0 FlhB HrpN YscU SpaS Family Bunya_NS-S PF01104.17 NODE_46538_length_416_cov_3.296588_g38723_i0reverse_frame_3 - 0.033 14.0 1.0 0.045 13.6 0.6 1.4 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s Mrr_cat PF04471.12 NODE_46528_length_416_cov_50.816273_g38713_i0forward_frame_3 - 0.08 13.0 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Restriction endonuclease Phage_clamp_A PF16790.5 NODE_46528_length_416_cov_50.816273_g38713_i0forward_frame_2 - 0.0051 17.3 0.3 0.0074 16.7 0.3 1.2 1 0 0 1 1 1 1 Bacteriophage clamp loader A subunit Phage_Integr_2 PF13009.6 NODE_46522_length_416_cov_63.811024_g38707_i0reverse_frame_2 - 0.0031 16.7 0.2 0.0038 16.4 0.2 1.1 1 0 0 1 1 1 1 Putative phage integrase Exo_endo_phos_2 PF14529.6 NODE_46522_length_416_cov_63.811024_g38707_i0reverse_frame_2 - 0.038 13.8 0.8 0.065 13.1 0.6 1.4 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase DTW PF03942.15 NODE_46517_length_416_cov_81.183727_g38702_i0reverse_frame_3 - 8e-11 42.0 0.0 1.2e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 DTW domain REC104 PF17378.2 NODE_46508_length_416_cov_139.443570_g38693_i0reverse_frame_2 - 0.0018 18.1 0.8 0.0021 17.9 0.8 1.1 1 0 0 1 1 1 1 Meiotic recombination protein REC104 4F5 PF04419.14 NODE_46505_length_416_cov_173.506562_g38690_i0forward_frame_3 - 0.12 13.2 6.4 0.23 12.4 6.4 1.4 1 0 0 1 1 1 0 4F5 protein family RseC_MucC PF04246.12 NODE_46493_length_416_cov_2220.372703_g38679_i0reverse_frame_3 - 0.23 11.4 0.7 0.28 11.1 0.7 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC ATE_N PF04376.13 NODE_46493_length_416_cov_2220.372703_g38679_i0forward_frame_3 - 0.12 12.8 0.0 0.26 11.7 0.0 1.5 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, N terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks164.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks164.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks164.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks164.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5418 PF17439.2 NODE_46482_length_417_cov_2.198953_g38668_i0forward_frame_3 - 0.81 9.8 9.9 0.99 9.5 9.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5418) Furin-like_2 PF15913.5 NODE_46479_length_417_cov_2.793194_g38665_i0reverse_frame_2 - 0.00054 20.1 0.4 0.097 12.8 0.0 2.1 2 0 0 2 2 2 2 Furin-like repeat, cysteine-rich IF3_C PF00707.22 NODE_46476_length_417_cov_3.591623_g38662_i0reverse_frame_3 - 0.091 12.7 1.1 0.14 12.1 1.1 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain Lamprin PF06403.11 NODE_46475_length_417_cov_3.772251_g38661_i0forward_frame_3 - 1.2 9.1 16.1 0.98 9.4 3.1 2.3 1 1 1 2 2 2 0 Lamprin TMEM52 PF14979.6 NODE_46473_length_417_cov_4.520942_g38659_i0forward_frame_2 - 1.7 8.6 7.0 4.1 7.3 1.1 2.2 1 1 1 2 2 2 0 Transmembrane 52 Reticulon PF02453.17 NODE_46469_length_417_cov_35.272251_g38656_i0forward_frame_2 - 0.027 14.4 2.3 0.033 14.2 2.3 1.1 1 0 0 1 1 1 0 Reticulon Lyase_8 PF02278.18 NODE_46469_length_417_cov_35.272251_g38656_i0forward_frame_2 - 0.08 12.4 0.5 0.097 12.1 0.5 1.3 1 1 0 1 1 1 0 Polysaccharide lyase family 8, super-sandwich domain Glyco_hydro_42 PF02449.15 NODE_46466_length_417_cov_46.636126_g38653_i0forward_frame_2 - 0.038 13.3 0.3 0.05 12.9 0.1 1.4 2 0 0 2 2 2 0 Beta-galactosidase Sipho_Gp157 PF05565.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.00027 21.0 3.0 0.00027 21.0 3.0 2.1 1 1 1 2 2 2 1 Siphovirus Gp157 APG6_N PF17675.1 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.00048 20.6 4.0 0.00048 20.6 4.0 1.8 1 1 1 2 2 2 1 Apg6 coiled-coil region DUF2968 PF11180.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0015 18.2 0.7 0.0015 18.2 0.7 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF2968) She9_MDM33 PF05546.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0017 18.2 4.4 0.0017 18.2 4.4 1.5 1 1 0 1 1 1 1 She9 / Mdm33 family DUF3450 PF11932.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0025 17.1 4.0 0.0025 17.1 4.0 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) TMF_TATA_bd PF12325.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0051 17.0 3.6 0.0051 17.0 3.6 2.2 1 1 0 2 2 2 1 TATA element modulatory factor 1 TATA binding Wtap PF17098.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0058 16.6 6.9 0.035 14.0 6.9 1.9 1 1 0 1 1 1 1 WTAP/Mum2p family GAS PF13851.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0062 15.9 11.3 0.0062 15.9 11.3 2.2 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding CortBP2 PF09727.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0073 16.2 3.5 0.0073 16.2 3.5 2.0 1 1 1 2 2 2 1 Cortactin-binding protein-2 DUF4164 PF13747.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.011 16.0 2.1 0.014 15.7 0.8 1.9 2 1 0 2 2 1 0 Domain of unknown function (DUF4164) BRE1 PF08647.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.012 15.6 10.5 0.012 15.6 10.5 1.8 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase PKcGMP_CC PF16808.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.014 15.2 1.1 1.3 8.9 0.0 3.0 2 1 1 3 3 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase ADIP PF11559.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.017 15.3 8.8 0.017 15.3 8.8 2.4 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding HMMR_N PF15905.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.018 14.5 16.0 0.021 14.3 16.0 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal BST2 PF16716.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.02 15.5 6.1 0.02 15.5 6.1 2.1 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 TMF_DNA_bd PF12329.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.029 14.4 10.0 0.029 14.4 10.0 3.1 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding Fungal_TACC PF12709.7 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.03 14.8 13.1 0.11 12.9 0.9 3.0 1 1 2 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins AAA_13 PF13166.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.031 13.0 11.5 0.038 12.6 11.5 1.2 1 0 0 1 1 1 0 AAA domain TolA_bind_tri PF16331.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.039 14.0 1.2 0.039 14.0 1.2 2.7 2 1 1 3 3 3 0 TolA binding protein trimerisation SlyX PF04102.12 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.055 14.1 0.7 0.055 14.1 0.7 2.4 1 1 0 2 2 2 0 SlyX Spc7 PF08317.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.061 12.2 12.6 0.083 11.8 12.6 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein V_ATPase_I PF01496.19 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.063 11.2 7.3 0.07 11.0 7.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HycH PF07450.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.066 13.6 1.0 0.094 13.1 0.6 1.5 1 1 0 1 1 1 0 Formate hydrogenlyase maturation protein HycH Prefoldin_2 PF01920.20 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.075 13.0 15.4 0.09 12.7 5.8 2.4 1 1 1 2 2 2 0 Prefoldin subunit TRAF_BIRC3_bd PF16673.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.077 12.8 2.5 0.2 11.4 2.5 1.7 1 0 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain QRPTase_C PF01729.19 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.08 12.7 0.6 0.13 12.0 0.3 1.4 1 1 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain KxDL PF10241.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.093 13.0 8.9 0.23 11.8 1.2 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein CENP-F_leu_zip PF10473.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.11 12.5 12.9 0.064 13.3 10.3 1.9 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1664 PF07889.12 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.14 12.2 7.3 0.21 11.6 7.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2730 PF10805.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.17 12.0 3.1 2.1 8.5 0.1 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF2730) Atg14 PF10186.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.18 10.9 10.4 0.21 10.6 10.2 1.2 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc42p PF11544.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.24 11.4 14.4 0.11 12.5 5.6 2.4 2 0 0 2 2 2 0 Spindle pole body component Spc42p DUF641 PF04859.12 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.28 11.5 7.1 1.4 9.3 7.1 2.3 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) bZIP_1 PF00170.21 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.31 11.2 16.4 0.12 12.4 5.3 3.0 1 1 3 4 4 4 0 bZIP transcription factor DUF948 PF06103.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.33 11.2 4.6 1 9.6 4.5 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF4200 PF13863.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.38 11.2 13.3 2.3 8.6 12.8 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) TMPIT PF07851.13 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.56 9.4 9.5 0.47 9.7 8.4 1.5 1 1 0 1 1 1 0 TMPIT-like protein DUF2207 PF09972.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.75 8.5 8.5 0.95 8.2 8.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4407 PF14362.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.79 9.0 6.5 1.1 8.6 6.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GrpE PF01025.19 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 1.1 9.0 13.8 2.6 7.7 6.3 2.2 1 1 1 2 2 2 0 GrpE Herpes_UL6 PF01763.16 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 1.2 7.6 10.8 2.8 6.4 10.8 1.6 1 1 0 1 1 1 0 Herpesvirus UL6 like DivIC PF04977.15 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 2.2 8.1 14.1 2.8 7.8 4.8 3.3 1 1 2 3 3 3 0 Septum formation initiator FlaC_arch PF05377.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 2.4 8.6 9.8 6.1 7.3 2.2 2.9 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) YabA PF06156.13 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 3.2 8.5 11.9 0.32 11.7 5.5 2.3 1 1 2 3 3 3 0 Initiation control protein YabA DUF4446 PF14584.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 3.2 7.7 8.7 41 4.1 7.7 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) Csm1_N PF18504.1 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 4.1 7.8 16.3 3.6 8.0 3.0 3.6 1 1 2 3 3 3 0 Csm1 N-terminal domain UPF0242 PF06785.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 5.4 7.1 15.4 0.45 10.6 7.0 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Peroxin-13_N PF04088.13 NODE_46454_length_417_cov_81.494764_g38641_i0forward_frame_2 - 0.042 14.1 0.6 0.078 13.2 0.3 1.6 1 1 1 2 2 2 0 Peroxin 13, N-terminal region Spc24 PF08286.11 NODE_46450_length_417_cov_84.916230_g38637_i0reverse_frame_2 - 0.028 14.7 1.2 0.048 13.9 1.2 1.4 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Alanine_zipper PF11839.8 NODE_46450_length_417_cov_84.916230_g38637_i0reverse_frame_2 - 0.33 11.3 18.5 0.078 13.4 14.5 2.0 2 0 0 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein Dsh_C PF12316.8 NODE_46450_length_417_cov_84.916230_g38637_i0reverse_frame_2 - 0.98 9.8 4.9 1.2 9.5 4.9 1.1 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal XAF1_C PF18608.1 NODE_46450_length_417_cov_84.916230_g38637_i0reverse_frame_2 - 3.8 7.1 8.1 0.23 11.1 1.7 2.2 2 0 0 2 2 2 0 XIAP-associated factor 1 C-terminal domain 7tm_3 PF00003.22 NODE_46439_length_417_cov_124.175393_g38627_i0forward_frame_2 - 0.11 12.2 8.6 0.12 12.1 8.6 1.2 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR SRP9-21 PF05486.12 NODE_46422_length_417_cov_455.282723_g38611_i0reverse_frame_3 - 0.056 13.8 1.8 0.14 12.5 0.0 2.3 1 1 2 3 3 3 0 Signal recognition particle 9 kDa protein (SRP9) TauD PF02668.16 ORF99357 - 2.1e-10 40.8 0.2 2.8e-10 40.4 0.2 1.3 1 1 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family CsiD PF08943.10 ORF99357 - 0.021 13.9 0.0 0.026 13.6 0.0 1.1 1 0 0 1 1 1 0 CsiD CRAL_TRIO PF00650.20 ORF98566 - 9.6e-06 25.4 0.0 1.3e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain DUF4632 PF15451.6 ORF98074 - 0.64 10.1 2.9 0.33 11.1 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4632) Arf PF00025.21 ORF97988 - 1.1e-43 148.7 0.7 1.2e-43 148.5 0.7 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF97988 - 3e-17 62.6 0.1 3.7e-17 62.3 0.1 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF97988 - 8.3e-13 48.3 0.2 9.9e-13 48.0 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF97988 - 9.6e-12 45.2 0.0 1.3e-11 44.8 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF97988 - 4e-10 39.8 0.1 5.2e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF97988 - 1.2e-08 34.5 1.8 2.2e-06 27.1 0.3 2.5 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF97988 - 4.5e-05 22.9 0.3 6e-05 22.5 0.3 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF97988 - 0.0034 17.0 1.3 0.072 12.6 0.4 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AAA_14 PF13173.6 ORF97988 - 0.0058 16.7 0.1 0.016 15.2 0.1 1.7 1 1 1 2 2 2 1 AAA domain NACHT PF05729.12 ORF97988 - 0.017 15.0 0.0 0.85 9.5 0.0 2.1 2 0 0 2 2 2 0 NACHT domain FeoB_N PF02421.18 ORF97988 - 0.059 12.9 0.8 0.62 9.6 0.8 2.2 1 1 0 1 1 1 0 Ferrous iron transport protein B PduV-EutP PF10662.9 ORF97988 - 0.068 12.9 0.0 0.29 10.9 0.0 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NTPase_1 PF03266.15 ORF97988 - 0.093 12.6 1.3 0.87 9.5 1.1 2.0 1 1 1 2 2 2 0 NTPase MobB PF03205.14 ORF97988 - 0.095 12.6 0.1 0.14 12.1 0.1 1.5 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B FBPase_3 PF01950.16 ORF97988 - 0.12 11.5 0.0 0.12 11.5 0.0 1.2 1 0 0 1 1 1 0 Fructose-1,6-bisphosphatase RsgA_GTPase PF03193.16 ORF97988 - 0.12 12.2 0.4 7.1 6.5 0.0 2.3 1 1 2 3 3 3 0 RsgA GTPase MIP PF00230.20 ORF97952 - 5.8e-07 29.5 2.1 7.1e-07 29.2 2.1 1.0 1 0 0 1 1 1 1 Major intrinsic protein TANGO2 PF05742.12 ORF96217 - 0.018 15.1 0.1 0.02 14.9 0.1 1.0 1 0 0 1 1 1 0 Transport and Golgi organisation 2 p450 PF00067.22 ORF9531 - 3.2e-22 78.9 0.0 3.6e-22 78.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 MFS_2 PF13347.6 ORF95305 - 4.8e-24 84.7 2.3 5.4e-24 84.5 2.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Pex24p PF06398.11 ORF94720 - 0.0086 15.1 1.2 0.0098 14.9 1.2 1.1 1 0 0 1 1 1 1 Integral peroxisomal membrane peroxin MMR1 PF08505.10 ORF93611 - 0.81 9.9 18.2 1 9.6 18.2 1.1 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein AAA_11 PF13086.6 ORF93611 - 9.7 5.9 17.9 11 5.7 17.9 1.1 1 0 0 1 1 1 0 AAA domain ATP-synt_C PF00137.21 ORF92308 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 2.0 2 1 0 2 2 2 1 ATP synthase subunit C Hydrolase_4 PF12146.8 ORF92173 - 7.4e-07 28.7 0.0 0.03 13.6 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF92173 - 0.00025 20.8 0.0 0.26 10.9 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 ORF92173 - 0.00029 20.7 0.1 0.12 12.2 0.0 2.1 1 1 1 2 2 2 2 Phospholipase/Carboxylesterase FSH1 PF03959.13 ORF92173 - 0.0013 18.4 0.0 0.0015 18.2 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase (FSH1) PhoPQ_related PF10142.9 ORF92173 - 0.01 14.6 0.1 0.012 14.3 0.1 1.0 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein Serinc PF03348.15 ORF92017 - 3.7e-22 78.9 21.4 3.9e-22 78.8 21.4 1.0 1 0 0 1 1 1 1 Serine incorporator (Serinc) DUF417 PF04224.12 ORF92017 - 0.033 13.8 8.8 0.023 14.3 3.2 2.0 1 1 1 2 2 2 0 Protein of unknown function, DUF417 DUF3333 PF11812.8 ORF92017 - 0.11 12.7 1.4 0.11 12.7 1.4 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3333) ABC2_membrane_2 PF12679.7 ORF92017 - 9.4 5.4 13.0 12 5.1 13.0 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein KilA-N PF04383.13 ORF91706 - 0.065 13.1 0.1 0.084 12.7 0.1 1.2 1 0 0 1 1 1 0 KilA-N domain DUF4632 PF15451.6 ORF91337 - 0.64 10.1 2.9 0.33 11.1 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4632) Peptidase_S49_N PF08496.10 ORF91130 - 0.87 9.6 3.6 5.2 7.1 0.4 2.4 2 0 0 2 2 2 0 Peptidase family S49 N-terminal DUF2207 PF09972.9 ORF91130 - 1.4 7.6 10.4 2.8 6.6 10.4 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) E1-E2_ATPase PF00122.20 ORF91130 - 1.6 8.2 6.9 1.6 8.2 0.6 2.0 1 1 1 2 2 2 0 E1-E2 ATPase DUF2639 PF11121.8 ORF89746 - 0.071 13.2 0.4 0.18 11.8 0.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2639) TIG PF01833.24 ORF88753 - 9.3e-10 38.5 4.9 9.7e-09 35.2 2.3 2.1 2 0 0 2 2 2 2 IPT/TIG domain DUF5008 PF16400.5 ORF88753 - 0.023 14.8 0.5 0.038 14.1 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5008) DUF4248 PF14053.6 ORF87476 - 0.029 14.4 0.2 7.4 6.7 0.0 3.3 2 1 2 4 4 4 0 Domain of unknown function (DUF4248) Copine PF07002.16 ORF87404 - 8.4e-43 146.4 0.2 9.2e-43 146.2 0.2 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF87404 - 5.5e-07 29.9 0.1 7.9e-07 29.4 0.1 1.2 1 0 0 1 1 1 1 vWA found in TerF C terminus TMEM173 PF15009.6 ORF87404 - 0.099 11.8 0.1 0.17 11.1 0.0 1.4 2 0 0 2 2 2 0 Transmembrane protein 173 UPF0261 PF06792.11 ORF85528 - 0.08 11.9 0.0 0.089 11.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0261) Phosphoprotein PF00922.17 ORF82 - 0.012 15.2 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein TGFb_propeptide PF00688.18 ORF81336 - 0.055 13.2 0.1 0.06 13.1 0.1 1.1 1 0 0 1 1 1 0 TGF-beta propeptide RNR_N PF08343.10 ORF80760 - 0.078 13.0 0.1 0.51 10.4 0.1 2.0 2 0 0 2 2 2 0 Ribonucleotide reductase N-terminal Spt20 PF12090.8 ORF80541 - 0.0082 15.8 9.4 0.0092 15.6 9.4 1.1 1 0 0 1 1 1 1 Spt20 family CCDC106 PF15794.5 ORF80541 - 0.02 14.6 4.9 0.023 14.4 4.9 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 DUF1635 PF07795.11 ORF80541 - 0.023 14.5 6.4 0.03 14.2 6.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) TFIIA PF03153.13 ORF80541 - 0.042 13.8 11.3 0.046 13.7 11.3 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Lin-8 PF03353.15 ORF80541 - 0.095 12.3 7.4 0.11 12.1 7.4 1.0 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist DUF3138 PF11336.8 ORF80541 - 0.19 10.3 2.9 0.21 10.2 2.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Androgen_recep PF02166.16 ORF80541 - 0.2 10.5 6.9 0.21 10.4 6.9 1.1 1 0 0 1 1 1 0 Androgen receptor V_ATPase_I PF01496.19 ORF80541 - 0.23 9.3 5.3 0.26 9.2 5.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family EMC3_TMCO1 PF01956.16 ORF80541 - 0.41 10.4 6.5 0.72 9.6 6.6 1.4 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like CLN3 PF02487.17 ORF80541 - 0.47 9.5 2.0 0.54 9.2 2.0 1.0 1 0 0 1 1 1 0 CLN3 protein Presenilin PF01080.17 ORF80541 - 1 8.1 8.5 1.2 7.9 8.5 1.1 1 0 0 1 1 1 0 Presenilin YABBY PF04690.13 ORF80541 - 1.1 9.8 4.9 1.3 9.5 4.9 1.1 1 0 0 1 1 1 0 YABBY protein Neur_chan_memb PF02932.16 ORF80541 - 1.5 8.9 4.4 1.5 8.8 4.4 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3381 PF11861.8 ORF80541 - 4.6 7.0 10.1 5.7 6.7 10.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) KIAA1430 PF13879.6 ORF79192 - 2.8e-08 34.4 5.0 2.8e-08 34.4 5.0 2.1 2 0 0 2 2 2 1 KIAA1430 homologue Receptor_2B4 PF11465.8 ORF79192 - 0.089 13.0 0.2 0.16 12.2 0.1 1.5 1 1 0 1 1 1 0 Natural killer cell receptor 2B4 YdfA_immunity PF12127.8 ORF79176 - 5.8 5.9 5.3 14 4.6 0.8 2.1 1 1 1 2 2 2 0 SigmaW regulon antibacterial KIAA1430 PF13879.6 ORF78590 - 2.8e-08 34.4 5.0 2.8e-08 34.4 5.0 2.1 2 0 0 2 2 2 1 KIAA1430 homologue Receptor_2B4 PF11465.8 ORF78590 - 0.089 13.0 0.2 0.16 12.2 0.1 1.5 1 1 0 1 1 1 0 Natural killer cell receptor 2B4 DUF465 PF04325.13 ORF78553 - 0.13 12.3 2.3 0.31 11.1 2.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF465) MreD PF04093.12 ORF77432 - 5.3e-40 137.1 17.6 5.9e-40 137.0 17.6 1.0 1 0 0 1 1 1 1 rod shape-determining protein MreD SNARE PF05739.19 ORF77121 - 0.00017 21.5 0.0 0.00029 20.8 0.0 1.4 1 0 0 1 1 1 1 SNARE domain DUF5601 PF18151.1 ORF77121 - 0.0072 16.6 0.8 0.011 16.0 0.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5601) Rif1_N PF12231.8 ORF77121 - 0.051 12.6 0.1 0.057 12.4 0.1 1.0 1 0 0 1 1 1 0 Rap1-interacting factor 1 N terminal Synaptobrevin PF00957.21 ORF77121 - 0.082 12.7 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 Synaptobrevin Pepsin-I3 PF06394.13 ORF77121 - 3.1 8.1 5.3 3.3 8.0 0.3 2.1 1 1 1 2 2 2 0 Pepsin inhibitor-3-like repeated domain Methyltransf_PK PF05891.12 ORF77075 - 0.016 14.7 0.0 0.026 14.1 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase PMI_typeI PF01238.21 ORF75730 - 7.9e-16 58.2 0.0 9.4e-16 58.0 0.0 1.1 1 0 0 1 1 1 1 Phosphomannose isomerase type I T2SSI PF02501.17 ORF75579 - 8.5e-13 48.3 0.1 1.3e-12 47.7 0.1 1.2 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein I N_methyl PF07963.12 ORF75579 - 7.8e-07 28.4 2.4 1.5e-06 27.5 2.4 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif PulG PF11773.8 ORF75579 - 0.014 15.2 1.1 0.022 14.6 1.1 1.3 1 0 0 1 1 1 0 Type II secretory pathway pseudopilin ANF_receptor PF01094.28 ORF73860 - 0.047 12.8 0.1 0.057 12.5 0.1 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region RSN1_7TM PF02714.15 ORF73364 - 8.7e-06 25.2 1.8 8.7e-06 25.2 1.8 1.9 2 0 0 2 2 2 1 Calcium-dependent channel, 7TM region, putative phosphate MotB_plug PF13677.6 ORF73364 - 0.021 14.4 0.2 0.021 14.4 0.2 2.7 3 0 0 3 3 3 0 Membrane MotB of proton-channel complex MotA/MotB RseC_MucC PF04246.12 ORF73364 - 4.7 7.2 7.3 6.8 6.6 0.2 2.1 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC THF_DHG_CYH PF00763.23 ORF71737 - 2.9e-21 75.9 1.2 3.8e-21 75.5 1.2 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THF_DHG_CYH_C PF02882.19 ORF71737 - 1e-16 60.7 0.0 1.4e-16 60.2 0.0 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Ligase_CoA PF00549.19 ORF71737 - 0.15 11.9 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 CoA-ligase Kelch_3 PF13415.6 ORF70855 - 0.099 13.0 0.0 0.29 11.5 0.0 1.7 2 0 0 2 2 2 0 Galactose oxidase, central domain Exop_C PF18559.1 ORF70855 - 0.11 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Galactose-binding domain-like Imm_superinfect PF14373.6 ORF70490 - 0.074 13.0 1.0 0.074 13.0 1.0 1.9 2 0 0 2 2 2 0 Superinfection immunity protein TPR_6 PF13174.6 ORF70188 - 0.013 16.1 0.0 0.028 15.1 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4290 PF14123.6 ORF70188 - 0.079 12.5 0.9 0.12 11.9 0.2 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4290) ANAPC3 PF12895.7 ORF70188 - 0.16 12.2 0.0 0.25 11.6 0.0 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 TLP-20 PF06088.11 ORF6937 - 0.56 10.1 3.9 0.91 9.4 3.9 1.5 1 1 0 1 1 1 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) RR_TM4-6 PF06459.12 ORF6937 - 0.57 10.0 7.2 0.66 9.8 7.2 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CDC45 PF02724.14 ORF6937 - 2.6 6.2 10.1 2.9 6.1 10.1 1.0 1 0 0 1 1 1 0 CDC45-like protein ATP-synt_C PF00137.21 ORF68950 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.9 2 0 0 2 2 2 1 ATP synthase subunit C ATP-synt_C PF00137.21 ORF68822 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.9 2 0 0 2 2 2 1 ATP synthase subunit C Ribosomal_L14 PF00238.19 ORF68294 - 1.2e-36 125.5 0.0 1.5e-36 125.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Penicil_amidase PF01804.18 ORF68 - 5.5e-06 25.6 0.0 6.7e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase HTH_3 PF01381.22 ORF66044 - 2.6e-07 30.6 0.0 4.8e-07 29.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HrpB2 PF09487.10 ORF66044 - 0.015 15.7 0.0 0.053 14.0 0.0 1.8 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB2) Histone_HNS PF00816.21 ORF66044 - 0.063 14.1 0.0 0.43 11.4 0.0 2.1 1 1 1 2 2 2 0 H-NS histone family Fis1_TPR_C PF14853.6 ORF66044 - 0.13 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat BetR PF08667.10 ORF66044 - 0.13 12.3 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 BetR domain UTRA PF07702.13 ORF65812 - 2.4e-26 92.3 0.0 2.8e-26 92.0 0.0 1.1 1 0 0 1 1 1 1 UTRA domain Ploopntkinase2 PF18747.1 ORF65812 - 0.024 13.9 0.0 0.031 13.6 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase2 WD40 PF00400.32 ORF65235 - 0.00034 21.4 0.1 0.0013 19.5 0.0 2.0 3 0 0 3 3 3 1 WD domain, G-beta repeat DUF2065 PF09838.9 ORF64321 - 0.024 14.7 0.3 0.066 13.2 0.1 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) HCMV_UL124 PF17609.2 ORF64321 - 4.8 7.4 7.2 1.1 9.5 1.2 2.5 2 1 0 2 2 2 0 Family of unknown function Pkinase PF00069.25 ORF62702 - 3.2e-26 92.3 4.2 3.7e-26 92.1 4.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62702 - 4.5e-16 58.9 2.8 5.1e-16 58.7 2.8 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF62702 - 0.00013 21.4 1.2 0.00016 21.1 1.2 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF62702 - 0.0097 15.5 0.0 0.012 15.3 0.0 1.2 1 1 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF62702 - 0.0099 15.8 0.2 0.33 10.8 0.1 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family MMM1 PF10296.9 ORF622 - 0.02 14.0 0.9 0.023 13.8 0.9 1.1 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Ly49 PF08391.10 ORF622 - 0.035 14.5 4.4 0.05 14.0 4.4 1.3 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region NS3_envE PF02723.14 ORF622 - 0.038 14.1 1.0 0.068 13.3 1.0 1.4 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E YMF19 PF02326.15 ORF622 - 0.11 13.3 1.5 0.16 12.8 1.4 1.5 1 1 0 1 1 1 0 Plant ATP synthase F0 Pilin_N PF07790.11 ORF622 - 0.12 13.3 0.1 0.18 12.7 0.1 1.4 1 0 0 1 1 1 0 Archaeal Type IV pilin, N-terminal DUF2976 PF11190.8 ORF622 - 0.17 11.7 0.9 6.5 6.6 0.4 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2976) PDEase_I PF00233.19 ORF60897 - 4.3e-08 33.2 0.8 7.8e-08 32.3 0.1 1.7 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase Seryl_tRNA_N PF02403.22 ORF60897 - 0.0039 17.4 0.6 0.0055 16.9 0.6 1.2 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain RRM_Rrp7 PF17799.1 ORF60897 - 0.027 14.3 0.3 0.057 13.2 0.1 1.6 2 0 0 2 2 2 0 Rrp7 RRM-like N-terminal domain CLAMP PF14769.6 ORF60541 - 2.8e-06 27.7 0.2 4.2e-06 27.1 0.2 1.3 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 Metallophos PF00149.28 ORF58979 - 8.4e-05 23.2 0.1 0.00013 22.5 0.1 1.4 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase DUF2854 PF11016.8 ORF58979 - 0.17 11.8 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) CLAMP PF14769.6 ORF58453 - 1.8e-06 28.3 0.2 2.7e-06 27.8 0.2 1.3 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 FlgN PF05130.12 ORF57727 - 4.7e-19 69.3 11.7 1.2e-18 68.0 11.7 1.6 1 1 0 1 1 1 1 FlgN protein CorA PF01544.18 ORF57727 - 0.026 13.8 3.1 0.03 13.7 3.1 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF745 PF05335.13 ORF57727 - 0.12 12.1 5.1 0.15 11.8 5.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF745) APP_amyloid PF10515.9 ORF57727 - 0.94 10.0 3.4 23 5.6 0.2 2.3 2 0 0 2 2 2 0 Beta-amyloid precursor protein C-terminus NAD_kinase PF01513.21 ORF54583 - 4.4e-33 114.7 1.3 5.4e-33 114.4 1.3 1.0 1 0 0 1 1 1 1 ATP-NAD kinase eIF-1a PF01176.19 ORF54583 - 0.041 13.7 0.0 0.12 12.2 0.0 1.8 1 1 0 1 1 1 0 Translation initiation factor 1A / IF-1 DUF4687 PF15747.5 ORF54583 - 0.05 14.1 1.7 3.2 8.2 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4687) DHHC PF01529.20 ORF53533 - 6.2 6.9 12.2 9.1 6.4 11.9 1.4 1 1 0 1 1 1 0 DHHC palmitoyltransferase Bombinin PF05298.11 ORF52500 - 0.028 14.1 0.0 0.036 13.7 0.0 1.3 1 0 0 1 1 1 0 Bombinin GTP_cyclohydro2 PF00925.20 ORF52500 - 0.033 13.8 0.0 0.042 13.4 0.0 1.2 1 0 0 1 1 1 0 GTP cyclohydrolase II IreB PF06135.12 ORF52500 - 1.1 9.5 4.0 9.6 6.5 0.1 2.7 2 1 1 3 3 3 0 IreB regulatory phosphoprotein Rad1 PF02144.16 ORF47707 - 0.0031 16.6 0.0 0.0034 16.5 0.0 1.1 1 0 0 1 1 1 1 Repair protein Rad1/Rec1/Rad17 DUF2170 PF09938.9 ORF47707 - 0.09 12.5 0.0 0.13 12.0 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2170) zf-CDGSH PF09360.10 ORF47227 - 8.4e-08 32.3 0.1 2.5e-07 30.8 0.1 1.8 2 0 0 2 2 2 1 Iron-binding zinc finger CDGSH type EF-hand_1 PF00036.32 ORF46485 - 7.5e-28 94.0 6.6 5.1e-07 28.8 0.1 5.1 5 0 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF46485 - 4.3e-24 84.7 5.2 3.3e-12 46.7 0.9 2.6 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF46485 - 2.9e-21 73.5 5.0 1.8e-06 27.4 0.1 5.3 4 1 0 5 5 5 4 EF-hand domain EF-hand_8 PF13833.6 ORF46485 - 1.4e-20 72.9 9.0 4.5e-10 39.2 0.1 4.1 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF46485 - 2.2e-18 64.8 6.0 2.9e-05 23.4 0.2 4.9 5 0 0 5 5 5 4 EF hand SPARC_Ca_bdg PF10591.9 ORF46485 - 1.9e-07 31.4 1.8 0.00018 21.8 0.1 2.7 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF46485 - 7.2e-06 26.1 3.8 0.0033 17.6 0.6 3.6 2 1 1 3 3 3 2 Dockerin type I domain EF-hand_4 PF12763.7 ORF46485 - 5e-05 23.2 1.6 0.046 13.7 0.3 2.1 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SapB_1 PF05184.15 ORF46485 - 0.0055 16.7 3.3 0.017 15.1 0.2 2.6 3 0 0 3 3 3 1 Saposin-like type B, region 1 EF-hand_10 PF14788.6 ORF46485 - 0.0068 16.2 2.5 6.2 6.8 0.0 3.9 4 1 1 5 5 5 2 EF hand DUF496 PF04363.12 ORF46485 - 0.1 12.6 2.4 0.22 11.6 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF496) TFIIE-A_C PF11521.8 ORF46431 - 1.3e-05 25.4 4.5 2.1e-05 24.7 3.8 1.8 1 1 1 2 2 2 1 C-terminal general transcription factor TFIIE alpha INO80_Ies4 PF08193.11 ORF46431 - 0.021 14.9 0.4 0.023 14.7 0.4 1.1 1 0 0 1 1 1 0 INO80 complex subunit Ies4 MotA_ExbB PF01618.16 ORF42772 - 0.17 11.6 0.0 0.26 11.0 0.0 1.3 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family Phage_TAC_11 PF11836.8 ORF42479 - 0.029 14.5 0.2 0.041 14.0 0.2 1.3 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 KLRAQ PF10205.9 ORF4025 - 0.0024 18.1 0.9 0.0024 18.1 0.9 1.7 2 1 0 2 2 2 1 Predicted coiled-coil domain-containing protein DUF2167 PF09935.9 ORF4025 - 0.34 10.1 4.0 1.4 8.1 4.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2167) Far-17a_AIG1 PF04750.14 ORF40049 - 4.3e-05 22.9 2.1 5e-05 22.7 2.1 1.1 1 0 0 1 1 1 1 FAR-17a/AIG1-like protein Integrase_H2C2 PF17921.1 ORF38626 - 0.96 9.6 3.8 5.8 7.1 0.1 2.6 3 0 0 3 3 3 0 Integrase zinc binding domain zf-TAZ PF02135.16 ORF38626 - 2.3 8.7 10.5 1.6 9.2 1.2 3.3 2 2 0 2 2 2 0 TAZ zinc finger DUF1724 PF08350.10 ORF3815 - 0.1 12.8 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1724) KilA-N PF04383.13 ORF36331 - 0.065 13.1 0.1 0.084 12.7 0.1 1.2 1 0 0 1 1 1 0 KilA-N domain Kelch_1 PF01344.25 ORF35402 - 1.2e-12 47.2 10.0 3.3e-12 45.8 0.2 3.6 4 0 0 4 4 4 2 Kelch motif Kelch_6 PF13964.6 ORF35402 - 5.3e-10 39.2 0.1 8e-07 29.1 0.0 2.9 1 1 2 3 3 3 2 Kelch motif Kelch_2 PF07646.15 ORF35402 - 5.7e-06 26.1 1.0 0.00014 21.7 0.0 2.9 4 0 0 4 4 4 1 Kelch motif Kelch_4 PF13418.6 ORF35402 - 0.001 19.0 0.0 1.9 8.5 0.0 2.6 2 0 0 2 2 2 2 Galactose oxidase, central domain DUF5472 PF17566.2 ORF35192 - 0.03 14.3 0.0 0.068 13.1 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5472) KilA-N PF04383.13 ORF35192 - 0.048 13.5 0.1 0.061 13.2 0.1 1.2 1 0 0 1 1 1 0 KilA-N domain ARD PF03079.14 ORF3515 - 0.046 13.9 3.7 0.09 13.0 1.9 1.9 1 1 1 2 2 2 0 ARD/ARD' family Secretin_N_2 PF07655.13 ORF35011 - 0.097 13.2 19.6 0.15 12.6 19.6 1.3 1 0 0 1 1 1 0 Secretin N-terminal domain CDK2AP PF09806.9 ORF35011 - 0.15 12.1 8.2 0.16 12.0 8.2 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein Apt1 PF10351.9 ORF35011 - 0.29 9.9 9.8 0.28 10.0 9.8 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain SPX PF03105.19 ORF35011 - 0.35 10.7 9.1 0.41 10.5 9.1 1.1 1 0 0 1 1 1 0 SPX domain CCDC24 PF15669.5 ORF35011 - 5.5 6.8 15.3 7.2 6.4 15.3 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family RraB PF06877.11 ORF34999 - 1.5e-34 118.7 0.7 2e-34 118.4 0.7 1.2 1 0 0 1 1 1 1 Regulator of ribonuclease activity B Ag332 PF04671.12 ORF34999 - 2.5 8.1 8.0 1.7 8.7 0.2 3.4 3 0 0 3 3 3 0 Erythrocyte membrane-associated giant protein antigen 332 MORN PF02493.20 ORF34863 - 9.4e-30 100.7 34.5 3.3e-07 29.8 2.4 7.0 7 0 0 7 7 7 7 MORN repeat Pkinase PF00069.25 ORF33933 - 3.6e-15 56.1 0.0 4.1e-15 55.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33933 - 0.031 13.6 0.0 0.034 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase ENTH PF01417.20 ORF33933 - 0.11 12.6 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 ENTH domain KIP1 PF07765.12 ORF33070 - 3.7 7.7 7.9 1.3 9.2 4.8 1.8 2 0 0 2 2 2 0 KIP1-like protein RNA_pol_Rpb4 PF03874.16 ORF31908 - 1.4e-07 31.8 0.1 1.7e-07 31.6 0.1 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb4 DUF438 PF04282.13 ORF31908 - 0.04 13.9 0.3 0.099 12.6 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF438) PdxJ PF03740.13 ORF31908 - 0.18 10.9 0.0 0.25 10.4 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthesis protein PdxJ SWI-SNF_Ssr4 PF08549.10 ORF30249 - 0.019 13.6 5.2 0.019 13.6 5.2 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) TPR_MLP1_2 PF07926.12 ORF30249 - 0.031 14.3 8.5 0.055 13.5 8.5 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein PSDC PF12588.8 ORF30249 - 0.058 13.4 0.2 0.073 13.0 0.2 1.1 1 0 0 1 1 1 0 Phophatidylserine decarboxylase OmpH PF03938.14 ORF30249 - 0.1 12.9 9.3 0.13 12.6 9.3 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) eIF-4B PF06273.11 ORF30249 - 0.11 11.5 7.5 0.15 11.1 7.5 1.1 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B 7tm_6 PF02949.20 ORF30249 - 0.11 11.5 0.6 0.15 11.1 0.6 1.2 1 0 0 1 1 1 0 7tm Odorant receptor DUF5132 PF17195.4 ORF30249 - 0.15 12.1 0.7 2.9 8.0 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF5132) Med9 PF07544.13 ORF30249 - 0.18 11.9 6.5 0.38 10.9 6.5 1.6 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Fib_alpha PF08702.10 ORF30249 - 0.21 11.8 5.8 0.31 11.2 5.8 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family APG6_N PF17675.1 ORF30249 - 0.66 10.5 12.0 1 9.9 12.0 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Histone_HNS PF00816.21 ORF30249 - 0.99 10.3 4.5 1.6 9.6 4.5 1.3 1 0 0 1 1 1 0 H-NS histone family CENP-H PF05837.12 ORF30249 - 6.7 7.2 10.2 1.2 9.6 6.8 1.4 2 0 0 2 2 1 0 Centromere protein H (CENP-H) Skp1 PF01466.19 ORF30019 - 0.0099 16.0 0.3 2.5 8.3 0.0 3.0 3 0 0 3 3 3 1 Skp1 family, dimerisation domain DUF3658 PF12395.8 ORF30019 - 0.023 14.6 0.1 0.033 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function Myb_DNA-binding PF00249.31 ORF30019 - 0.042 14.0 0.0 0.091 13.0 0.0 1.6 1 0 0 1 1 1 0 Myb-like DNA-binding domain RRT14 PF17075.5 ORF30019 - 0.15 12.2 0.3 0.15 12.2 0.3 1.8 2 0 0 2 2 2 0 Regular of rDNA transcription protein 14 Mago-bind PF09282.10 ORF29385 - 1.2 9.0 6.2 0.44 10.5 2.9 2.0 2 0 0 2 2 2 0 Mago binding LSM PF01423.22 ORF28756 - 6.8e-17 60.9 0.0 9.2e-17 60.5 0.0 1.2 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 ORF28756 - 0.014 15.5 0.0 0.021 14.9 0.0 1.4 1 0 0 1 1 1 0 Ataxin 2 SM domain Pro_isomerase PF00160.21 ORF28294 - 0.00069 19.9 0.0 0.00099 19.4 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF1082 PF06449.11 ORF28049 - 0.11 12.4 0.2 0.17 11.8 0.2 1.3 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) MORN PF02493.20 ORF27817 - 9.4e-30 100.7 34.5 3.3e-07 29.8 2.4 7.0 7 0 0 7 7 7 7 MORN repeat Ribosomal_L16 PF00252.18 ORF27384 - 9.7e-07 28.9 0.0 1.1e-06 28.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Sugar_tr PF00083.24 ORF26620 - 3.5e-17 62.4 9.3 3.9e-17 62.3 9.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF26620 - 2.7e-07 29.8 8.7 3.8e-07 29.4 8.7 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily ATE_C PF04377.15 ORF26620 - 0.1 13.3 0.0 0.14 12.8 0.0 1.2 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, C terminus MORN PF02493.20 ORF26228 - 0.02 14.7 9.5 7.3 6.7 2.3 3.4 3 0 0 3 3 3 0 MORN repeat Cytochrome_CBB3 PF13442.6 ORF2509 - 5.2e-06 26.7 1.1 6.5e-06 26.4 0.4 1.6 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF2509 - 0.00016 21.4 0.0 0.00022 21.0 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c-550 domain Cytochrom_C PF00034.21 ORF2509 - 0.0039 18.3 0.4 0.0058 17.7 0.4 1.3 1 0 0 1 1 1 1 Cytochrome c Cytochrome_C7 PF14522.6 ORF2509 - 0.035 14.1 0.3 0.05 13.6 0.3 1.3 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c DUF2613 PF11021.8 ORF2509 - 1.5 8.9 8.7 0.25 11.5 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) EamA PF00892.20 ORF24964 - 6.2e-08 32.9 6.9 4.1e-06 27.0 2.9 2.1 1 1 1 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 ORF24964 - 5.2e-07 29.1 1.4 5.8e-07 28.9 1.4 1.1 1 0 0 1 1 1 1 Magnesium transporter NIPA PUNUT PF16913.5 ORF24964 - 0.00021 20.6 1.9 0.00026 20.3 1.2 1.5 1 1 1 2 2 2 1 Purine nucleobase transmembrane transport Sugar_transport PF06800.12 ORF24964 - 0.0042 16.5 1.7 0.0054 16.1 1.7 1.1 1 0 0 1 1 1 1 Sugar transport protein DctQ PF04290.12 ORF24964 - 0.039 13.9 4.6 0.17 11.8 1.0 2.1 2 0 0 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component Asp PF00026.23 ORF24728 - 8.5e-09 35.3 0.0 1.4e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF24728 - 0.022 14.6 0.0 0.032 14.0 0.0 1.3 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal HemY_N PF07219.13 ORF24728 - 0.035 14.3 0.3 0.047 13.9 0.3 1.1 1 0 0 1 1 1 0 HemY protein N-terminus Orf78 PF06024.12 ORF24728 - 0.1 12.9 0.3 0.14 12.4 0.3 1.3 1 0 0 1 1 1 0 Orf78 (ac78) U-box PF04564.15 ORF24341 - 0.0076 16.4 0.1 0.016 15.4 0.1 1.6 1 1 0 1 1 1 1 U-box domain GLTSCR1 PF15249.6 ORF2429 - 0.0088 16.5 0.2 0.01 16.2 0.2 1.2 1 0 0 1 1 1 1 Conserved region of unknown function on GLTSCR protein HEPPP_synt_1 PF07307.11 ORF2429 - 0.0097 15.5 0.2 0.012 15.3 0.2 1.1 1 0 0 1 1 1 1 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 PRMT5 PF05185.16 ORF2429 - 0.044 13.6 0.5 0.056 13.3 0.5 1.2 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase EF-hand_1 PF00036.32 ORF20983 - 4.7e-14 50.8 4.4 1.4e-06 27.4 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF20983 - 2.1e-12 47.3 1.8 5.7e-12 45.9 1.4 1.8 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF20983 - 2.5e-12 45.7 0.8 1.7e-06 27.5 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF20983 - 2.8e-08 33.5 4.4 0.0029 17.4 0.0 3.0 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF20983 - 4.8e-06 25.8 5.4 8.6e-05 21.9 0.1 2.7 2 1 0 2 2 2 2 EF hand DUF1654 PF07867.11 ORF20983 - 0.0033 17.1 0.3 0.041 13.6 0.2 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1654) DUF2179 PF10035.9 ORF20983 - 0.055 13.2 0.5 5.9 6.7 0.1 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2179) GXWXG PF14231.6 ORF2095 - 0.034 14.2 0.0 0.057 13.5 0.0 1.3 1 0 0 1 1 1 0 GXWXG protein Herpes_glycop_D PF01537.17 ORF2095 - 0.97 9.6 3.9 0.47 10.6 1.0 1.8 2 0 0 2 2 2 0 Herpesvirus glycoprotein D/GG/GX domain SWI-SNF_Ssr4 PF08549.10 ORF20531 - 0.019 13.6 5.2 0.019 13.6 5.2 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) TPR_MLP1_2 PF07926.12 ORF20531 - 0.031 14.3 8.5 0.055 13.5 8.5 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein PSDC PF12588.8 ORF20531 - 0.058 13.4 0.2 0.073 13.0 0.2 1.1 1 0 0 1 1 1 0 Phophatidylserine decarboxylase OmpH PF03938.14 ORF20531 - 0.1 12.9 9.3 0.13 12.6 9.3 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) eIF-4B PF06273.11 ORF20531 - 0.11 11.5 7.5 0.15 11.1 7.5 1.1 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B 7tm_6 PF02949.20 ORF20531 - 0.11 11.5 0.6 0.15 11.1 0.6 1.2 1 0 0 1 1 1 0 7tm Odorant receptor DUF5132 PF17195.4 ORF20531 - 0.15 12.1 0.7 2.9 8.0 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF5132) Med9 PF07544.13 ORF20531 - 0.18 11.9 6.5 0.38 10.9 6.5 1.6 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Fib_alpha PF08702.10 ORF20531 - 0.21 11.8 5.8 0.31 11.2 5.8 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family APG6_N PF17675.1 ORF20531 - 0.66 10.5 12.0 1 9.9 12.0 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Histone_HNS PF00816.21 ORF20531 - 0.99 10.3 4.5 1.6 9.6 4.5 1.3 1 0 0 1 1 1 0 H-NS histone family CENP-H PF05837.12 ORF20531 - 6.7 7.2 10.2 1.2 9.6 6.8 1.4 2 0 0 2 2 1 0 Centromere protein H (CENP-H) PPR PF01535.20 ORF19926 - 5.4e-05 23.2 0.0 0.00076 19.6 0.0 2.6 3 0 0 3 3 3 1 PPR repeat PPR_2 PF13041.6 ORF19926 - 0.019 15.2 0.0 0.031 14.4 0.0 1.5 1 0 0 1 1 1 0 PPR repeat family PHD PF00628.29 ORF19926 - 1.3 9.0 8.6 0.22 11.4 0.5 2.5 2 1 0 2 2 2 0 PHD-finger Phospholip_A2_1 PF00068.19 ORF19552 - 0.045 14.2 0.5 0.065 13.7 0.5 1.3 1 0 0 1 1 1 0 Phospholipase A2 IQCJ-SCHIP1 PF15157.6 ORF19138 - 2.5 7.9 9.4 0.27 11.1 3.5 2.1 1 1 1 2 2 2 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif UPF0047 PF01894.17 ORF16914 - 1.4e-34 118.7 0.0 1.6e-34 118.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 2OG-FeII_Oxy_3 PF13640.6 ORF16397 - 5.6e-16 59.2 0.0 7.8e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 ORF16397 - 0.029 14.8 0.0 0.09 13.2 0.0 1.8 1 1 1 2 2 2 0 Putative 2OG-Fe(II) oxygenase PikAIV_N PF18605.1 ORF12378 - 0.16 11.6 0.1 0.27 10.9 0.1 1.3 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Peptidase_S49_N PF08496.10 ORF11454 - 0.87 9.6 3.6 5.2 7.1 0.4 2.4 2 0 0 2 2 2 0 Peptidase family S49 N-terminal DUF2207 PF09972.9 ORF11454 - 1.4 7.6 10.4 2.8 6.6 10.4 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) E1-E2_ATPase PF00122.20 ORF11454 - 1.6 8.2 6.9 1.6 8.2 0.6 2.0 1 1 1 2 2 2 0 E1-E2 ATPase EamA PF00892.20 ORF112146 - 6.2e-08 32.9 6.9 4.1e-06 27.0 2.9 2.1 1 1 1 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 ORF112146 - 5.2e-07 29.1 1.4 5.8e-07 28.9 1.4 1.1 1 0 0 1 1 1 1 Magnesium transporter NIPA PUNUT PF16913.5 ORF112146 - 0.00021 20.6 1.9 0.00026 20.3 1.2 1.5 1 1 1 2 2 2 1 Purine nucleobase transmembrane transport Sugar_transport PF06800.12 ORF112146 - 0.0042 16.5 1.7 0.0054 16.1 1.7 1.1 1 0 0 1 1 1 1 Sugar transport protein DctQ PF04290.12 ORF112146 - 0.039 13.9 4.6 0.17 11.8 1.0 2.1 2 0 0 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component BLOC1_2 PF10046.9 ORF111689 - 7e-05 23.1 1.5 0.00013 22.2 1.5 1.4 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 PP_M1 PF03012.14 ORF111647 - 0.06 12.9 0.1 0.078 12.5 0.1 1.1 1 0 0 1 1 1 0 Phosphoprotein Calsequestrin PF01216.17 ORF111647 - 0.085 11.9 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Calsequestrin Phosphoprotein PF00922.17 ORF108755 - 0.012 15.2 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein GAF PF01590.26 ORF106352 - 6.7e-14 52.7 0.0 7.4e-14 52.5 0.0 1.0 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 ORF106352 - 2.4e-11 44.1 0.0 2.7e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 ORF106352 - 0.00012 22.5 0.0 0.00014 22.2 0.0 1.1 1 0 0 1 1 1 1 GAF domain Staphylcoagulse PF04022.12 ORF106352 - 0.083 12.4 0.6 0.16 11.5 0.5 1.5 2 0 0 2 2 2 0 Staphylocoagulase repeat Phage_holin_3_6 PF07332.11 ORF106021 - 1.4 9.0 4.8 2.4 8.2 4.8 1.5 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2852 PF11014.8 ORF105549 - 0.095 12.9 1.2 0.13 12.4 0.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2852) BcrAD_BadFG PF01869.20 ORF104365 - 1.6e-34 119.7 0.2 1.7e-34 119.5 0.2 1.0 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family MreB_Mbl PF06723.13 ORF104365 - 0.0088 14.9 0.0 0.0088 14.9 0.0 1.2 1 0 0 1 1 1 1 MreB/Mbl protein FGGY_C PF02782.16 ORF104365 - 0.012 15.3 1.1 0.039 13.7 0.2 1.8 1 1 1 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain CS PF04969.16 ORF10319 - 1.7e-07 32.2 0.0 2.4e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 CS domain FAM153 PF15722.5 ORF10319 - 0.012 15.9 0.2 0.031 14.6 0.2 1.6 1 1 0 1 1 1 0 FAM153 family Propep_M14 PF02244.16 ORF10319 - 0.074 13.5 0.1 0.11 12.9 0.1 1.3 1 0 0 1 1 1 0 Carboxypeptidase activation peptide DUF1390 PF07150.11 ORF10319 - 0.094 12.4 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1390) DUF3592 PF12158.8 ORF102530 - 2.8e-11 43.7 0.0 3.6e-11 43.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3592) DUF2614 PF11023.8 ORF102530 - 0.19 11.9 0.8 0.25 11.4 0.8 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain RNA_pol_Rpb4 PF03874.16 ORF101810 - 6.7e-08 32.9 0.2 1.2e-07 32.1 0.2 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb4 COPI_assoc PF08507.10 ORF101810 - 0.034 14.2 0.0 0.042 13.9 0.0 1.2 1 0 0 1 1 1 0 COPI associated protein DUF1690 PF07956.11 ORF101298 - 0.03 14.7 3.1 0.039 14.4 3.1 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) APC_N_CC PF16689.5 ORF101298 - 0.32 11.1 3.4 15 5.7 1.0 2.9 2 1 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain ZapB PF06005.12 ORF101298 - 1.9 9.0 10.7 3.3 8.2 3.7 2.2 1 1 1 2 2 2 0 Cell division protein ZapB GPS2_interact PF15784.5 ORF101298 - 4.8 7.7 8.9 9 6.8 0.9 2.4 1 1 1 2 2 2 0 G-protein pathway suppressor 2-interacting domain PhyH PF05721.13 ORF100482 - 0.00084 19.6 0.1 0.0014 18.9 0.1 1.4 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) PS_Dcarbxylase PF02666.15 NODE_47067_length_409_cov_1.692513_g39232_i0reverse_frame_1 - 0.2 11.2 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylserine decarboxylase Chromadorea_ALT PF05535.12 NODE_47066_length_409_cov_1.695187_g39231_i0forward_frame_1 - 0.026 14.7 0.4 0.026 14.7 0.4 1.7 2 0 0 2 2 2 0 Chromadorea ALT protein DUF2852 PF11014.8 NODE_47053_length_409_cov_2.409091_g39218_i0reverse_frame_1 - 0.011 15.9 0.1 0.015 15.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) EF-hand_7 PF13499.6 NODE_47053_length_409_cov_2.409091_g39218_i0reverse_frame_1 - 0.023 15.2 0.1 0.031 14.7 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_8 PF13833.6 NODE_47053_length_409_cov_2.409091_g39218_i0reverse_frame_1 - 0.033 14.0 0.0 0.071 13.0 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain pair Glyco_trans_2_3 PF13632.6 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 5.5e-23 81.9 0.0 6.3e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 1.9e-14 54.1 0.0 2.1e-14 54.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 8.1e-10 38.4 0.0 9.5e-10 38.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 21 Chitin_synth_2 PF03142.15 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 2.1e-05 23.3 0.1 0.0062 15.2 0.0 2.0 1 1 1 2 2 2 2 Chitin synthase Glycos_transf_2 PF00535.26 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 0.15 11.8 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF3110 PF11360.8 NODE_47050_length_409_cov_2.799465_g39215_i0forward_frame_1 - 0.054 13.7 0.2 0.42 10.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3110) zf-LYAR PF08790.11 NODE_47047_length_409_cov_3.280749_g39212_i0reverse_frame_1 - 1.9e-08 34.0 0.3 1.9e-08 34.0 0.3 2.2 2 0 0 2 2 2 1 LYAR-type C2HC zinc finger zf_UBZ PF18439.1 NODE_47047_length_409_cov_3.280749_g39212_i0reverse_frame_1 - 8.4e-05 22.1 0.2 0.51 10.0 0.0 2.4 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-UBP PF02148.19 NODE_47047_length_409_cov_3.280749_g39212_i0reverse_frame_1 - 0.031 14.6 1.1 0.07 13.5 1.1 1.6 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein DZR PF12773.7 NODE_47047_length_409_cov_3.280749_g39212_i0reverse_frame_1 - 0.067 13.2 1.9 0.14 12.2 1.9 1.5 1 0 0 1 1 1 0 Double zinc ribbon zf-C2H2_6 PF13912.6 NODE_47047_length_409_cov_3.280749_g39212_i0reverse_frame_1 - 0.068 13.2 2.2 3 7.9 0.2 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger Sgf11 PF08209.11 NODE_47047_length_409_cov_3.280749_g39212_i0reverse_frame_1 - 0.11 12.1 1.6 0.73 9.5 0.2 2.1 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-C2H2_4 PF13894.6 NODE_47047_length_409_cov_3.280749_g39212_i0reverse_frame_1 - 0.17 12.8 4.3 5.9 8.0 0.3 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_47047_length_409_cov_3.280749_g39212_i0reverse_frame_1 - 0.32 11.6 3.1 3.3 8.4 0.3 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type FYDLN_acid PF09538.10 NODE_47047_length_409_cov_3.280749_g39212_i0reverse_frame_1 - 10 6.9 12.5 2.2 9.0 8.6 1.9 2 1 0 2 2 2 0 Protein of unknown function (FYDLN_acid) HTH_DeoR PF08220.12 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 2.4e-21 75.2 0.2 3.3e-21 74.8 0.2 1.2 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 7e-10 38.7 0.1 1e-09 38.2 0.1 1.3 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 0.00041 19.9 0.1 0.00092 18.8 0.1 1.5 1 1 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_5 PF01022.20 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 0.002 18.0 0.0 0.0032 17.3 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF977 PF06163.11 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 0.08 12.9 0.1 0.23 11.4 0.1 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF977) DUF2313 PF10076.9 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 0.13 12.1 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2313) BetaGal_dom3 PF13363.6 NODE_47034_length_409_cov_62.050802_g39199_i0forward_frame_1 - 0.056 13.0 0.2 13 5.4 0.0 2.9 3 0 0 3 3 3 0 Beta-galactosidase, domain 3 TTc_toxin_rep PF18807.1 NODE_47034_length_409_cov_62.050802_g39199_i0forward_frame_1 - 0.22 11.3 0.9 1.1 9.1 0.3 2.1 2 0 0 2 2 2 0 Tripartite Tc toxins repeat Rpr2 PF04032.16 NODE_47034_length_409_cov_62.050802_g39199_i0forward_frame_1 - 1 9.7 6.4 0.66 10.3 0.1 2.6 2 1 1 3 3 3 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Bact_transglu_N PF08379.10 NODE_47030_length_409_cov_66.604278_g39196_i0forward_frame_1 - 0.054 14.4 0.0 0.1 13.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial transglutaminase-like N-terminal region NodZ PF05830.11 NODE_47029_length_409_cov_67.262032_g39195_i0reverse_frame_1 - 0.1 11.4 0.3 0.29 9.9 0.1 1.6 1 1 1 2 2 2 0 Nodulation protein Z (NodZ) DUF2070 PF09843.9 NODE_47029_length_409_cov_67.262032_g39195_i0forward_frame_1 - 1.1 7.5 8.9 1.1 7.4 8.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FF PF01846.19 NODE_47016_length_409_cov_169.336898_g39182_i0reverse_frame_1 - 2.3e-05 24.5 0.0 4e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 FF domain Cellulose_synt PF03552.14 NODE_47016_length_409_cov_169.336898_g39182_i0reverse_frame_1 - 0.046 12.2 0.9 0.051 12.1 0.9 1.1 1 0 0 1 1 1 0 Cellulose synthase AIM3 PF17096.5 NODE_47016_length_409_cov_169.336898_g39182_i0reverse_frame_1 - 3.7 8.6 18.9 2.1 9.3 7.5 2.2 2 0 0 2 2 2 0 Altered inheritance of mitochondria protein 3 Mlh1_C PF16413.5 NODE_47016_length_409_cov_169.336898_g39182_i0reverse_frame_1 - 8.4 5.7 9.0 0.63 9.4 2.5 1.9 2 0 0 2 2 2 0 DNA mismatch repair protein Mlh1 C-terminus DUF1218 PF06749.12 NODE_46999_length_410_cov_1.200000_g39167_i0reverse_frame_1 - 0.028 14.9 0.3 0.045 14.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) DUF1280 PF06918.14 NODE_46993_length_410_cov_2.184000_g39161_i0reverse_frame_1 - 0.066 12.8 0.3 0.085 12.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1280) Topo_Zn_Ribbon PF08272.11 NODE_46992_length_410_cov_2.210667_g39160_i0reverse_frame_1 - 3.6e-40 135.4 0.3 9.1e-24 82.8 2.5 2.2 2 0 0 2 2 2 2 Topoisomerase I zinc-ribbon-like zf-C4_Topoisom PF01396.19 NODE_46992_length_410_cov_2.210667_g39160_i0reverse_frame_1 - 5.6e-05 22.8 0.2 0.085 12.7 0.3 2.4 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger TTL PF03133.15 NODE_46989_length_410_cov_2.789333_g39157_i0reverse_frame_1 - 1.4e-27 96.6 0.5 1.8e-27 96.3 0.5 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family cNMP_binding PF00027.29 NODE_46986_length_410_cov_3.488000_g39154_i0forward_frame_1 - 2.5e-17 62.7 0.0 3.1e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain PBP_sp32 PF07222.12 NODE_46983_length_410_cov_3.861333_g39151_i0reverse_frame_1 - 0.042 13.3 0.1 0.053 13.0 0.1 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 CPSase_sm_chain PF00988.22 NODE_46983_length_410_cov_3.861333_g39151_i0reverse_frame_1 - 0.13 12.0 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase small chain, CPSase domain FHIPEP PF00771.20 NODE_46982_length_410_cov_3.952000_g39150_i0forward_frame_1 - 0.08 11.4 1.7 0.095 11.1 1.7 1.0 1 0 0 1 1 1 0 FHIPEP family PRIMA1 PF16101.5 NODE_46979_length_410_cov_12.194667_g39147_i0reverse_frame_1 - 1.3 9.0 7.9 0.74 9.9 3.5 2.1 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 SR-25 PF10500.9 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_1 - 0.77 9.3 14.2 0.83 9.2 14.2 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RBM1CTR PF08081.11 NODE_46976_length_410_cov_57.074667_g39144_i0forward_frame_1 - 0.077 13.1 0.6 0.14 12.3 0.6 1.3 1 0 0 1 1 1 0 RBM1CTR (NUC064) family AIB PF15334.6 NODE_46975_length_410_cov_58.994667_g39143_i0reverse_frame_1 - 0.17 11.2 8.5 0.22 10.9 8.5 1.1 1 0 0 1 1 1 0 Aurora kinase A and ninein interacting protein UPF0242 PF06785.11 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 0.0019 18.4 2.4 0.0023 18.0 2.4 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Glyco_H_20C_C PF18088.1 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 0.0069 16.3 0.4 0.0097 15.8 0.4 1.2 1 0 0 1 1 1 1 Glycoside Hydrolase 20C C-terminal domain Snapin_Pallidin PF14712.6 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 0.021 15.2 1.6 0.021 15.2 1.6 1.8 2 0 0 2 2 2 0 Snapin/Pallidin Radial_spoke_3 PF06098.11 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 0.044 13.1 7.3 0.059 12.6 7.3 1.1 1 0 0 1 1 1 0 Radial spoke protein 3 DUF4795 PF16043.5 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 0.076 12.6 6.1 0.1 12.2 6.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) TPR_MLP1_2 PF07926.12 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 0.11 12.5 8.0 0.17 11.9 8.0 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DivIC PF04977.15 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 0.17 11.6 8.2 0.16 11.7 2.3 2.2 1 1 1 2 2 2 0 Septum formation initiator bZIP_1 PF00170.21 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 0.25 11.5 9.5 0.85 9.8 3.9 2.3 2 0 0 2 2 2 0 bZIP transcription factor bZIP_2 PF07716.15 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 0.28 11.3 8.9 1.5 9.0 2.1 2.6 1 1 1 2 2 2 0 Basic region leucine zipper M PF02370.16 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 1.8 9.4 7.3 2 9.2 0.9 2.6 2 1 0 2 2 2 0 M protein repeat NYD-SP28_assoc PF14775.6 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 2 8.6 6.9 3 8.0 0.4 2.5 1 1 1 2 2 2 0 Sperm tail C-terminal domain ZapB PF06005.12 NODE_46962_length_410_cov_82.317333_g39131_i0forward_frame_1 - 5.7 7.5 11.3 1.9e+02 2.6 11.1 2.3 1 1 0 1 1 1 0 Cell division protein ZapB DUF3014 PF11219.8 NODE_46956_length_410_cov_99.032000_g39125_i0reverse_frame_1 - 0.097 12.9 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3014) Phe_ZIP PF08916.11 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_1 - 3 8.6 10.0 14 6.5 0.3 3.0 2 1 1 3 3 3 0 Phenylalanine zipper Stealth_CR1 PF17101.5 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_1 - 5 6.9 7.3 35 4.3 0.3 3.2 3 0 0 3 3 3 0 Stealth protein CR1, conserved region 1 DUF4530 PF15039.6 NODE_46943_length_410_cov_314.365333_g39114_i0reverse_frame_1 - 0.034 14.3 0.0 0.053 13.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4530) C1_1 PF00130.22 NODE_46943_length_410_cov_314.365333_g39114_i0reverse_frame_1 - 0.038 13.9 4.6 0.038 13.9 4.6 2.3 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) UPF0047 PF01894.17 NODE_46942_length_410_cov_314.669333_g39113_i0reverse_frame_1 - 0.018 15.2 0.1 0.024 14.8 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0047 Ras PF00071.22 NODE_46941_length_410_cov_318.744000_g39112_i0forward_frame_1 - 2.4e-10 40.2 0.1 7e-10 38.7 0.1 1.7 1 1 0 1 1 1 1 Ras family Roc PF08477.13 NODE_46941_length_410_cov_318.744000_g39112_i0forward_frame_1 - 0.00027 21.1 0.0 0.00057 20.1 0.0 1.5 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Utp12 PF04003.12 NODE_46940_length_410_cov_589.042667_g39111_i0reverse_frame_1 - 0.047 14.0 0.3 2.5 8.4 0.0 2.2 2 0 0 2 2 2 0 Dip2/Utp12 Family DUF2098 PF09871.9 NODE_46939_length_410_cov_622.701333_g39110_i0reverse_frame_1 - 0.045 14.1 0.4 0.068 13.5 0.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) S10_plectin PF03501.15 NODE_46936_length_410_cov_1440.661333_g39108_i0reverse_frame_1 - 0.089 12.9 0.3 0.13 12.3 0.3 1.2 1 0 0 1 1 1 0 Plectin/S10 domain DUF3523 PF12037.8 NODE_46932_length_411_cov_1.271277_g39105_i0forward_frame_1 - 1e-14 54.6 24.0 1.2e-14 54.3 24.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3523) DUF1400 PF07176.11 NODE_46932_length_411_cov_1.271277_g39105_i0forward_frame_1 - 0.025 14.9 1.1 0.042 14.1 1.1 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1400) RabGAP-TBC PF00566.18 NODE_46932_length_411_cov_1.271277_g39105_i0forward_frame_1 - 4.4 6.9 11.0 4.9 6.8 10.1 1.6 1 1 2 3 3 3 0 Rab-GTPase-TBC domain IHHNV_capsid PF16530.5 NODE_46929_length_411_cov_1.686170_g39102_i0reverse_frame_1 - 0.0054 15.9 0.0 0.0062 15.7 0.0 1.2 1 0 0 1 1 1 1 Infectious hypodermal and haematopoietic necrosis virus, capsid Leg1 PF05612.12 NODE_46920_length_411_cov_2.382979_g39093_i0reverse_frame_1 - 0.066 12.4 0.0 0.087 12.0 0.0 1.1 1 0 0 1 1 1 0 Leg1 DUF1287 PF06940.11 NODE_46914_length_411_cov_2.867021_g39087_i0forward_frame_1 - 6.6e-09 35.6 0.1 9e-09 35.2 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1287) CstA_5TM PF13722.6 NODE_46914_length_411_cov_2.867021_g39087_i0forward_frame_1 - 0.048 14.0 0.0 0.056 13.8 0.0 1.2 1 0 0 1 1 1 0 5TM C-terminal transporter carbon starvation CstA Zn_ribbon_SprT PF17283.2 NODE_46912_length_411_cov_2.954787_g39085_i0forward_frame_1 - 0.15 12.0 5.5 0.84 9.6 0.3 2.5 3 0 0 3 3 3 0 SprT-like zinc ribbon domain Fer4 PF00037.27 NODE_46911_length_411_cov_3.117021_g39084_i0forward_frame_1 - 3.9 7.4 14.4 0.24 11.3 2.7 2.5 1 1 1 2 2 2 0 4Fe-4S binding domain cNMP_binding PF00027.29 NODE_46904_length_411_cov_33.135638_g39077_i0reverse_frame_1 - 0.1 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain USP8_dimer PF08969.11 NODE_46904_length_411_cov_33.135638_g39077_i0forward_frame_1 - 0.15 12.2 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 USP8 dimerisation domain FSH1 PF03959.13 NODE_46900_length_411_cov_64.257979_g39073_i0reverse_frame_1 - 2.8e-15 56.5 0.0 3.3e-15 56.3 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase (FSH1) CxxCxxCC PF03692.15 NODE_46898_length_411_cov_78.587766_g39071_i0forward_frame_1 - 0.065 13.9 0.2 0.078 13.7 0.2 1.3 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain DOCK_N PF16172.5 NODE_46889_length_411_cov_104.773936_g39062_i0reverse_frame_1 - 0.09 11.7 0.0 0.1 11.5 0.0 1.0 1 0 0 1 1 1 0 DOCK N-terminus DUF630 PF04783.12 NODE_46884_length_411_cov_117.199468_g39057_i0forward_frame_1 - 0.048 13.8 0.3 0.093 12.9 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF630) Cys_rich_VLP PF14194.6 NODE_46877_length_411_cov_138.154255_g39050_i0forward_frame_1 - 7.7 6.7 10.4 30 4.8 0.1 2.7 2 1 1 3 3 3 0 Cysteine-rich VLP Glyco_transf_22 PF03901.17 NODE_46873_length_411_cov_161.882979_g39046_i0forward_frame_1 - 0.29 10.3 1.7 0.32 10.2 1.7 1.1 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family KaiA PF07688.12 NODE_46869_length_411_cov_216.284574_g39042_i0forward_frame_1 - 0.081 13.1 0.4 0.12 12.5 0.3 1.5 1 1 0 1 1 1 0 KaiA C-terminal domain AAA_lid_1 PF17857.1 NODE_46848_length_412_cov_2.283820_g39022_i0forward_frame_3 - 0.071 13.3 0.3 0.11 12.8 0.3 1.3 1 0 0 1 1 1 0 AAA+ lid domain DUF463 PF04317.12 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 5.3e-13 48.7 0.2 7e-13 48.3 0.2 1.2 1 0 0 1 1 1 1 YcjX-like family, DUF463 T2SSE PF00437.20 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 0.029 13.4 0.0 0.038 13.0 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein Chlorophyllase PF07224.11 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 0.047 12.7 0.0 0.065 12.2 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase ATPase_2 PF01637.18 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 0.13 12.1 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea RNA_pol_Rpb2_2 PF04561.14 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 0.14 11.8 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 2 Thionin PF00321.17 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_2 - 0.095 13.2 2.1 0.15 12.6 2.1 1.3 1 0 0 1 1 1 0 Plant thionin LacI PF00356.21 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 2.6e-10 39.9 0.5 2.6e-10 39.9 0.5 1.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family MarR_2 PF12802.7 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.00075 19.3 0.0 0.0014 18.5 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_38 PF13936.6 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.0012 18.6 0.0 0.0023 17.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.0046 16.7 0.0 0.0081 15.9 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_23 PF13384.6 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.0059 16.4 0.1 0.011 15.5 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Crp_2 PF13545.6 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.01 15.8 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_3 PF01381.22 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.01 15.9 0.0 0.017 15.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix MarR PF01047.22 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.014 15.3 0.0 0.022 14.7 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_7 PF02796.15 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.016 15.3 0.1 0.029 14.4 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase TrmB PF01978.19 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.039 13.8 0.1 0.071 13.0 0.1 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.044 13.7 0.0 0.092 12.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_10 PF04967.12 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.17 11.7 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain Orthopox_C10L PF07020.11 NODE_46843_length_412_cov_2.482759_g39017_i0reverse_frame_3 - 0.04 14.7 0.0 0.082 13.7 0.0 1.5 1 1 0 1 1 1 0 Orthopoxvirus C10L protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks165.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks165.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks165.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks165.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SNARE_assoc PF09335.11 NODE_46843_length_412_cov_2.482759_g39017_i0forward_frame_3 - 3.4e-22 79.2 5.9 3.4e-22 79.2 5.9 1.9 1 1 1 2 2 2 1 SNARE associated Golgi protein DUF1345 PF07077.11 NODE_46839_length_412_cov_2.726790_g39013_i0forward_frame_3 - 0.021 14.5 2.7 0.028 14.1 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1345) NTP_transferase PF00483.23 NODE_46839_length_412_cov_2.726790_g39013_i0forward_frame_2 - 8.8e-34 117.2 0.0 9.4e-34 117.1 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase DUF4469 PF14734.6 NODE_46837_length_412_cov_2.766578_g39011_i0reverse_frame_2 - 0.039 14.1 0.0 0.052 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4469) with IG-like fold FixS PF03597.15 NODE_46834_length_412_cov_3.159151_g39008_i0forward_frame_3 - 0.049 13.4 0.7 0.12 12.1 0.7 1.6 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type DUF4371 PF14291.6 NODE_46823_length_412_cov_41.657825_g38997_i0reverse_frame_3 - 0.014 15.0 1.4 0.017 14.8 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4371) SP_C-Propep PF08999.10 NODE_46822_length_412_cov_51.477454_g38996_i0forward_frame_3 - 0.011 15.5 0.4 0.017 14.9 0.4 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide VEGFR-2_TMD PF17988.1 NODE_46820_length_412_cov_54.188329_g2374_i1reverse_frame_3 - 0.22 11.0 3.4 0.45 10.0 3.4 1.5 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain CSTF2_hinge PF14327.6 NODE_46810_length_412_cov_80.236074_g38985_i0reverse_frame_3 - 0.043 14.3 0.1 0.07 13.6 0.1 1.4 1 0 0 1 1 1 0 Hinge domain of cleavage stimulation factor subunit 2 DUF4588 PF15251.6 NODE_46810_length_412_cov_80.236074_g38985_i0reverse_frame_2 - 0.0062 16.3 0.1 0.01 15.6 0.1 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4588) Adeno_E1B_19K PF01691.16 NODE_46810_length_412_cov_80.236074_g38985_i0reverse_frame_2 - 0.017 14.7 0.1 0.021 14.4 0.1 1.1 1 0 0 1 1 1 0 Adenovirus E1B 19K protein / small t-antigen Lin-8 PF03353.15 NODE_46810_length_412_cov_80.236074_g38985_i0reverse_frame_2 - 0.028 14.0 0.3 0.029 13.9 0.3 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Med9 PF07544.13 NODE_46810_length_412_cov_80.236074_g38985_i0reverse_frame_2 - 0.032 14.3 0.0 0.051 13.7 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 DUF2576 PF10845.8 NODE_46810_length_412_cov_80.236074_g38985_i0reverse_frame_2 - 0.047 13.3 0.5 0.14 11.8 0.5 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) HSBP1 PF06825.12 NODE_46810_length_412_cov_80.236074_g38985_i0reverse_frame_2 - 0.14 12.0 1.1 0.27 11.1 1.1 1.5 1 0 0 1 1 1 0 Heat shock factor binding protein 1 Formyl_trans_C PF02911.18 NODE_46809_length_412_cov_81.082228_g38984_i0reverse_frame_3 - 0.16 12.2 0.0 0.2 11.9 0.0 1.4 1 1 0 1 1 1 0 Formyl transferase, C-terminal domain AATF-Che1 PF13339.6 NODE_46808_length_412_cov_84.755968_g38983_i0reverse_frame_2 - 0.038 14.7 0.2 0.047 14.4 0.2 1.1 1 0 0 1 1 1 0 Apoptosis antagonizing transcription factor Nodulin_late PF07127.11 NODE_46795_length_412_cov_117.230769_g38970_i0forward_frame_3 - 6.4 7.2 7.3 0.87 10.0 0.4 2.5 3 0 0 3 3 3 0 Late nodulin protein VanZ PF04892.12 NODE_46793_length_412_cov_138.108753_g38968_i0forward_frame_2 - 0.57 10.9 8.7 1.1 10.0 8.7 1.6 1 1 0 1 1 1 0 VanZ like family WIYLD PF10440.9 NODE_46792_length_412_cov_140.416446_g38967_i0forward_frame_3 - 0.019 14.7 0.0 0.036 13.9 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-binding WIYLD domain SHOCT PF09851.9 NODE_46777_length_413_cov_1.695767_g38954_i0forward_frame_3 - 0.094 12.5 0.1 0.094 12.5 0.1 2.1 3 0 0 3 3 3 0 Short C-terminal domain DUF2981 PF11200.8 NODE_46776_length_413_cov_1.753968_g38953_i0reverse_frame_3 - 0.012 15.4 0.7 0.015 15.0 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) DUF3385 PF11865.8 NODE_46775_length_413_cov_1.846561_g38952_i0reverse_frame_3 - 0.016 15.1 0.1 0.043 13.7 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3385) DUF4034 PF13226.6 NODE_46771_length_413_cov_2.171958_g38948_i0forward_frame_3 - 0.16 11.3 0.1 0.21 10.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4034) FERM_F1 PF18379.1 NODE_46769_length_413_cov_2.497354_g38946_i0forward_frame_3 - 0.086 12.9 0.3 0.11 12.5 0.3 1.2 1 0 0 1 1 1 0 FERM F1 ubiquitin-like domain Glyco_transf_4 PF13439.6 NODE_46768_length_413_cov_2.534392_g38945_i0reverse_frame_3 - 0.12 12.4 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glucosaminidase PF01832.20 NODE_46767_length_413_cov_2.674603_g38944_i0forward_frame_2 - 7.7e-07 29.5 0.1 1.1e-06 29.1 0.1 1.2 1 0 0 1 1 1 1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Izumo-Ig PF16706.5 NODE_46759_length_413_cov_38.235450_g38936_i0reverse_frame_2 - 0.081 13.0 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain Dsl1_N PF11988.8 NODE_46757_length_413_cov_45.912698_g38934_i0reverse_frame_3 - 0.0015 17.5 0.9 0.0019 17.3 0.9 1.1 1 0 0 1 1 1 1 Retrograde transport protein Dsl1 N terminal Fzo_mitofusin PF04799.13 NODE_46757_length_413_cov_45.912698_g38934_i0reverse_frame_3 - 0.011 15.3 0.9 0.013 15.0 0.9 1.2 1 0 0 1 1 1 0 fzo-like conserved region Fungal_TACC PF12709.7 NODE_46757_length_413_cov_45.912698_g38934_i0reverse_frame_3 - 0.076 13.5 1.3 0.13 12.7 1.3 1.3 1 0 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins Arc_PepC_II PF06847.11 NODE_46755_length_413_cov_69.513228_g38932_i0forward_frame_3 - 0.013 16.0 0.3 0.017 15.6 0.3 1.3 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II CN_hydrolase PF00795.22 NODE_46750_length_413_cov_74.219577_g38927_i0forward_frame_3 - 0.0088 15.4 0.0 0.0093 15.3 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF3254 PF11630.8 NODE_46750_length_413_cov_74.219577_g38927_i0forward_frame_3 - 0.03 14.5 0.1 0.052 13.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3254) DUF4750 PF15938.5 NODE_46747_length_413_cov_82.087302_g38924_i0reverse_frame_3 - 5.4 6.8 9.6 0.23 11.1 2.8 2.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4750) TRI9 PF08195.11 NODE_46739_length_413_cov_99.153439_g38916_i0forward_frame_3 - 0.047 13.6 0.1 0.099 12.5 0.1 1.5 1 0 0 1 1 1 0 TRI9 protein Ank_4 PF13637.6 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 1e-10 41.9 0.5 1.4e-06 28.7 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 6.5e-08 33.0 0.0 8.4e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 6.7e-06 26.3 0.1 0.004 17.5 0.1 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.00063 20.0 0.0 0.0014 18.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) DpnI PF06044.12 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.0049 16.5 0.0 0.0071 16.0 0.0 1.3 1 0 0 1 1 1 1 Dam-replacing family Ank_3 PF13606.6 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.018 15.6 0.0 0.075 13.6 0.0 2.0 2 0 0 2 2 2 0 Ankyrin repeat EIF_2_alpha PF07541.12 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.065 13.3 0.0 0.12 12.4 0.0 1.6 1 1 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit ComGF PF15980.5 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.081 13.3 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Putative Competence protein ComGF CENP-H PF05837.12 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.0027 18.1 0.2 0.0034 17.8 0.2 1.1 1 0 0 1 1 1 1 Centromere protein H (CENP-H) She9_MDM33 PF05546.11 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.0046 16.8 0.4 0.0061 16.4 0.4 1.1 1 0 0 1 1 1 1 She9 / Mdm33 family HAD_2 PF13419.6 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.026 14.6 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Fucokinase PF07959.12 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.033 13.1 0.1 0.041 12.8 0.1 1.1 1 0 0 1 1 1 0 L-fucokinase Jnk-SapK_ap_N PF09744.9 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.099 12.9 4.4 0.14 12.4 4.4 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Pex24p PF06398.11 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.13 11.3 0.1 0.14 11.1 0.1 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin PAH PF02671.21 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.65 10.2 2.6 1.5 9.0 2.6 1.6 1 1 0 1 1 1 0 Paired amphipathic helix repeat SpoVAC_SpoVAEB PF03862.13 NODE_46730_length_413_cov_114.285714_g38907_i0forward_frame_3 - 0.083 13.2 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 SpoVAC/SpoVAEB sporulation membrane protein Myotoxins PF00819.17 NODE_46730_length_413_cov_114.285714_g38907_i0forward_frame_3 - 0.13 12.6 0.4 0.27 11.6 0.4 1.6 1 0 0 1 1 1 0 Myotoxin, crotamine AidB_N PF18158.1 NODE_46725_length_413_cov_124.642857_g38902_i0forward_frame_3 - 0.066 13.1 0.1 0.082 12.8 0.1 1.1 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain FtsJ PF01728.19 NODE_46723_length_413_cov_136.375661_g38900_i0reverse_frame_2 - 2.7e-06 27.6 0.1 4.4e-06 26.9 0.1 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase BDV_M PF16520.5 NODE_46720_length_413_cov_154.650794_g29356_i1reverse_frame_2 - 0.081 13.3 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae MORN PF02493.20 NODE_46717_length_413_cov_160.047619_g38895_i0forward_frame_3 - 2.2e-11 42.9 3.8 6.9e-06 25.6 0.8 2.5 2 0 0 2 2 2 2 MORN repeat Ribosomal_L22e PF01776.17 NODE_46716_length_413_cov_161.193122_g38894_i0reverse_frame_3 - 2.7e-45 153.2 1.7 3.3e-45 152.9 1.7 1.0 1 0 0 1 1 1 1 Ribosomal L22e protein family Ephrin_rec_like PF07699.13 NODE_46705_length_413_cov_380.124339_g38883_i0forward_frame_3 - 0.031 14.0 4.7 0.052 13.3 4.7 1.3 1 0 0 1 1 1 0 Putative ephrin-receptor like zf-met PF12874.7 NODE_46698_length_413_cov_14421.933862_g38878_i0forward_frame_2 - 0.34 11.4 2.1 13 6.3 0.2 2.4 2 0 0 2 2 2 0 Zinc-finger of C2H2 type NADHdh_A3 PF14987.6 NODE_46697_length_413_cov_49302.624339_g30537_i14reverse_frame_2 - 0.014 15.6 0.0 0.02 15.1 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 baeRF_family7 PF18849.1 NODE_46696_length_414_cov_1.258575_g38877_i0reverse_frame_3 - 0.13 12.5 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 7 SWIRM PF04433.17 NODE_46696_length_414_cov_1.258575_g38877_i0forward_frame_3 - 0.018 15.3 0.3 0.027 14.8 0.3 1.2 1 0 0 1 1 1 0 SWIRM domain TMEM40 PF15817.5 NODE_46695_length_414_cov_1.316623_g38876_i0forward_frame_2 - 0.092 12.5 1.0 0.12 12.1 1.0 1.3 1 0 0 1 1 1 0 Transmembrane protein 40 family DUF809 PF05663.11 NODE_46695_length_414_cov_1.316623_g38876_i0forward_frame_2 - 0.61 10.2 3.6 0.71 10.0 3.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF809) EamA PF00892.20 NODE_46692_length_414_cov_1.812665_g38873_i0forward_frame_3 - 2e-07 31.2 3.5 3e-07 30.7 3.5 1.2 1 0 0 1 1 1 1 EamA-like transporter family Neur_chan_memb PF02932.16 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.028 14.5 0.1 0.029 14.4 0.1 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Aldedh PF00171.22 NODE_46685_length_414_cov_2.448549_g38866_i0forward_frame_3 - 3.3e-50 171.0 0.1 3.6e-50 170.8 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 NODE_46685_length_414_cov_2.448549_g38866_i0forward_frame_3 - 0.041 12.9 0.0 0.048 12.7 0.0 1.0 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) TonB_2 PF13103.6 NODE_46684_length_414_cov_2.459103_g38865_i0forward_frame_3 - 0.018 15.3 0.0 0.025 14.8 0.0 1.2 1 0 0 1 1 1 0 TonB C terminal Tho2 PF11262.8 NODE_46682_length_414_cov_2.696570_g38863_i0reverse_frame_2 - 0.067 12.4 0.2 0.077 12.2 0.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF2156 PF09924.9 NODE_46682_length_414_cov_2.696570_g38863_i0reverse_frame_2 - 0.12 11.3 0.0 0.17 10.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2156) SSB PF00436.25 NODE_46681_length_414_cov_2.704485_g38862_i0reverse_frame_3 - 0.024 14.7 0.1 0.033 14.2 0.1 1.3 1 0 0 1 1 1 0 Single-strand binding protein family Phospholamban PF04272.14 NODE_46681_length_414_cov_2.704485_g38862_i0reverse_frame_2 - 0.063 12.8 0.1 0.13 11.8 0.1 1.5 1 0 0 1 1 1 0 Phospholamban AAA_PrkA PF08298.11 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 3.7e-55 187.3 0.0 4e-55 187.2 0.0 1.0 1 0 0 1 1 1 1 PrkA AAA domain AAA_16 PF13191.6 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 4.2e-05 24.0 0.0 6.3e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 0.0048 17.2 0.0 0.0085 16.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 0.0055 16.7 0.1 0.016 15.2 0.1 1.7 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 0.034 13.5 0.0 0.049 13.0 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 0.038 13.7 0.0 0.05 13.4 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain RsgA_GTPase PF03193.16 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 0.057 13.3 0.1 0.074 12.9 0.1 1.4 1 1 0 1 1 1 0 RsgA GTPase Rad17 PF03215.15 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 0.06 13.3 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain HEPN PF05168.14 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 0.11 12.7 0.1 0.2 11.8 0.0 1.5 1 1 0 1 1 1 0 HEPN domain IstB_IS21 PF01695.17 NODE_46680_length_414_cov_2.725594_g38861_i0reverse_frame_3 - 0.13 12.0 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein C2 PF00168.30 NODE_46671_length_414_cov_59.981530_g38852_i0reverse_frame_2 - 2.7e-13 50.1 0.0 3.6e-13 49.7 0.0 1.2 1 0 0 1 1 1 1 C2 domain Defensin_1 PF00323.19 NODE_46668_length_414_cov_71.266491_g38849_i0reverse_frame_2 - 0.14 12.7 1.9 0.16 12.6 0.1 2.1 2 0 0 2 2 2 0 Mammalian defensin zf-like PF04071.12 NODE_46661_length_414_cov_94.992084_g22498_i2forward_frame_2 - 0.033 14.1 0.8 0.053 13.4 0.8 1.4 1 0 0 1 1 1 0 Cysteine-rich small domain zf-RING_2 PF13639.6 NODE_46658_length_414_cov_98.300792_g38840_i0reverse_frame_3 - 6.1e-07 29.7 5.2 1e-06 29.0 5.2 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_46658_length_414_cov_98.300792_g38840_i0reverse_frame_3 - 1.2e-05 24.9 3.8 2.8e-05 23.8 3.8 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_46658_length_414_cov_98.300792_g38840_i0reverse_frame_3 - 0.00011 22.0 4.5 0.00019 21.2 4.5 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_46658_length_414_cov_98.300792_g38840_i0reverse_frame_3 - 0.00028 21.1 5.6 0.00086 19.5 5.6 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_46658_length_414_cov_98.300792_g38840_i0reverse_frame_3 - 0.00074 19.3 4.1 0.0015 18.3 4.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_46658_length_414_cov_98.300792_g38840_i0reverse_frame_3 - 0.0019 18.2 1.8 0.0036 17.3 1.9 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 NODE_46658_length_414_cov_98.300792_g38840_i0reverse_frame_3 - 0.018 15.0 3.5 0.031 14.3 3.5 1.5 1 0 0 1 1 1 0 zinc-RING finger domain zf-RING_UBOX PF13445.6 NODE_46658_length_414_cov_98.300792_g38840_i0reverse_frame_3 - 0.018 15.0 4.5 0.038 14.0 4.5 1.6 1 0 0 1 1 1 0 RING-type zinc-finger Baculo_RING PF05883.11 NODE_46658_length_414_cov_98.300792_g38840_i0reverse_frame_3 - 0.056 13.4 0.1 0.069 13.1 0.1 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain DUF1857 PF08982.11 NODE_46646_length_414_cov_346.839050_g38828_i0reverse_frame_3 - 0.075 12.9 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1857) Spec3 PF15795.5 NODE_46642_length_414_cov_896.786280_g38825_i0forward_frame_3 - 1e-08 35.6 18.9 1.8e-07 31.6 18.9 2.2 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein TM2 PF05154.16 NODE_46642_length_414_cov_896.786280_g38825_i0forward_frame_3 - 7.4 7.0 14.0 1.3 9.4 6.5 2.2 2 0 0 2 2 2 0 TM2 domain Rv2175c_C PF18367.1 NODE_46642_length_414_cov_896.786280_g38825_i0forward_frame_2 - 0.051 13.7 0.1 0.079 13.1 0.1 1.2 1 0 0 1 1 1 0 Rv2175c C-terminal domain of unknown function Lactamase_B_3 PF13483.6 NODE_46642_length_414_cov_896.786280_g38825_i0forward_frame_2 - 0.1 12.5 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Tim17 PF02466.19 NODE_46640_length_414_cov_1573.261214_g38823_i0reverse_frame_2 - 0.023 15.1 0.0 0.023 15.1 0.0 1.1 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family Glycolytic PF00274.19 NODE_46639_length_414_cov_1888.860158_g38822_i0forward_frame_2 - 5.1e-05 22.2 0.1 6.9e-05 21.7 0.1 1.2 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I DUF4569 PF15133.6 NODE_46638_length_414_cov_3151.435356_g38821_i0forward_frame_3 - 0.025 14.3 1.1 0.03 14.1 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4569) SVIP PF15811.5 ORF98733 - 0.01 16.3 2.7 0.01 16.3 2.7 2.3 2 0 0 2 2 2 0 Small VCP/p97-interacting protein FAM47 PF14642.6 ORF98733 - 0.13 11.8 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 FAM47 family Hexapep PF00132.24 ORF98350 - 3.9e-07 29.5 1.0 0.015 15.0 0.0 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Antifungal_prot PF11402.8 ORF97827 - 0.046 14.0 1.8 0.057 13.7 0.6 1.7 1 1 0 1 1 1 0 Antifungal protein Dynein_heavy PF03028.15 ORF97694 - 3.2e-36 124.0 0.1 3.7e-36 123.8 0.1 1.1 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain DUF3295 PF11702.8 ORF9708 - 0.078 12.3 0.8 0.086 12.2 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) LRS4 PF10422.9 ORF9708 - 0.13 11.9 0.4 0.14 11.7 0.4 1.1 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 RsfS PF02410.15 ORF96826 - 0.12 12.8 0.1 0.18 12.2 0.1 1.3 1 1 0 1 1 1 0 Ribosomal silencing factor during starvation DUF1279 PF06916.13 ORF96724 - 0.17 12.5 0.1 0.25 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1279) DUF5128 PF17170.4 ORF95952 - 0.013 14.6 3.9 0.014 14.5 3.9 1.0 1 0 0 1 1 1 0 6-bladed beta-propeller Binary_toxB_2 PF17475.2 ORF95139 - 0.029 14.1 1.0 0.035 13.8 1.0 1.1 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA domain 2 SelK_SelG PF10961.8 ORF93842 - 0.19 12.3 0.2 0.36 11.5 0.2 1.4 1 0 0 1 1 1 0 Selenoprotein SelK_SelG RabGAP-TBC PF00566.18 ORF93522 - 0.00051 19.8 0.9 0.63 9.6 0.1 2.2 2 0 0 2 2 2 2 Rab-GTPase-TBC domain UQ_con PF00179.26 ORF9346 - 4e-16 58.9 0.0 4.1e-16 58.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 ORF9346 - 0.049 13.5 0.0 0.059 13.2 0.0 1.2 1 0 0 1 1 1 0 UEV domain RWD PF05773.22 ORF9346 - 0.07 13.4 0.0 0.084 13.2 0.0 1.2 1 0 0 1 1 1 0 RWD domain OST_P2 PF18235.1 ORF9346 - 0.084 12.8 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Oligosaccharyltransferase Peripheral 2 domain MIP PF00230.20 ORF92809 - 0.00021 21.1 0.1 0.00024 20.9 0.1 1.1 1 0 0 1 1 1 1 Major intrinsic protein UPF0227 PF05728.12 ORF92739 - 0.029 14.3 0.4 0.19 11.6 0.0 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) TMEM247 PF15444.6 ORF92517 - 0.17 11.9 2.1 0.21 11.6 2.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 eIF-3c_N PF05470.12 ORF91208 - 1.6e-09 36.7 2.6 1.6e-09 36.7 2.6 1.3 1 1 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 8 N-terminus UvsY PF11056.8 ORF91208 - 0.057 13.8 2.8 0.18 12.1 2.8 1.7 1 1 1 2 2 2 0 Recombination, repair and ssDNA binding protein UvsY EF-hand_12 PF17901.1 ORF91208 - 0.088 13.3 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 EF-hand fold domain CDC45 PF02724.14 ORF91208 - 0.12 10.6 5.1 0.15 10.3 5.1 1.0 1 0 0 1 1 1 0 CDC45-like protein RP-C_C PF11800.8 ORF91208 - 0.33 11.0 0.2 0.33 11.0 0.2 1.8 1 1 1 2 2 2 0 Replication protein C C-terminal region TMPIT PF07851.13 ORF91208 - 0.41 9.9 3.6 0.48 9.6 3.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein Dsh_C PF12316.8 ORF91208 - 0.52 10.7 2.7 0.57 10.6 2.7 1.0 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal FlxA PF14282.6 ORF91208 - 1.9 8.5 7.6 2.1 8.4 1.4 2.1 1 1 1 2 2 2 0 FlxA-like protein DUF1681 PF07933.14 ORF89597 - 0.062 13.0 0.0 0.062 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) MORN PF02493.20 ORF89242 - 2.3e-10 39.7 28.6 0.00025 20.8 2.2 4.5 4 0 0 4 4 4 4 MORN repeat DUF3048_C PF17479.2 ORF89242 - 0.013 15.8 3.1 0.023 15.1 1.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Ank_2 PF12796.7 ORF89105 - 9.6e-07 29.3 0.0 2.6e-06 27.9 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF89105 - 2.9e-05 24.3 0.4 0.032 14.5 0.2 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF89105 - 0.0003 21.3 0.0 2.1 9.0 0.0 2.8 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF89105 - 0.001 19.4 0.1 0.065 13.7 0.1 2.4 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 ORF89105 - 0.021 15.3 0.0 5.8 7.8 0.0 2.7 2 0 0 2 2 2 0 Ankyrin repeat Ank_5 PF13857.6 ORF87301 - 1.1e-10 41.5 0.2 2e-06 27.9 0.0 2.5 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF87301 - 2.1e-08 34.6 0.0 5.3e-08 33.4 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF87301 - 1.5e-07 31.8 0.0 3.8e-05 24.2 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF87301 - 2.9e-07 30.3 0.0 0.0083 16.6 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF87301 - 4.8e-06 26.8 0.0 1.5 9.4 0.0 3.5 3 1 0 3 3 3 3 Ankyrin repeat Shigella_OspC PF06128.11 ORF87301 - 0.18 11.5 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 Shigella flexneri OspC protein HA70_C PF17993.1 ORF87120 - 0.16 12.0 1.5 0.22 11.6 0.1 1.9 2 1 0 2 2 2 0 Haemagglutinin 70 C-terminal domain RAP1 PF07218.11 ORF85987 - 1.2 7.3 3.1 1.3 7.2 3.1 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF4696 PF15767.5 ORF85390 - 0.02 13.5 0.5 0.022 13.4 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4696) FAD_binding_3 PF01494.19 ORF85390 - 0.061 12.6 0.1 0.078 12.2 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain GTP_EFTU_D3 PF03143.17 ORF85390 - 0.1 12.9 0.3 0.19 12.1 0.3 1.4 1 0 0 1 1 1 0 Elongation factor Tu C-terminal domain Fer2 PF00111.27 ORF84877 - 0.065 13.2 0.0 0.13 12.3 0.0 1.5 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain RR_TM4-6 PF06459.12 ORF82658 - 1.3 8.8 16.8 1.4 8.7 16.8 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF4407 PF14362.6 ORF82658 - 5 6.4 11.0 5.8 6.2 11.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Allexi_40kDa PF05549.11 ORF82658 - 7.1 6.0 6.8 9.1 5.7 6.8 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein NARP1 PF12569.8 ORF82658 - 8.2 5.2 21.6 8.5 5.2 21.6 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Ax_dynein_light PF10211.9 ORF82658 - 9.5 6.1 21.4 14 5.6 21.4 1.3 1 0 0 1 1 1 0 Axonemal dynein light chain E3_binding PF02817.17 ORF81510 - 3.8e-07 30.3 0.0 1.2e-06 28.7 0.0 1.8 2 0 0 2 2 2 1 e3 binding domain 7tm_3 PF00003.22 ORF79285 - 0.015 15.0 2.4 0.019 14.7 2.4 1.3 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR Pex14_N PF04695.13 ORF78624 - 0.33 11.6 9.1 0.43 11.2 9.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF641 PF04859.12 ORF77160 - 1.1e-06 29.0 17.5 0.022 15.1 0.8 3.8 1 1 3 4 4 4 3 Plant protein of unknown function (DUF641) HMMR_N PF15905.5 ORF77160 - 2.1e-05 24.2 19.0 3e-05 23.7 19.0 1.2 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Lebercilin PF15619.6 ORF77160 - 8.6e-05 22.3 14.5 0.00014 21.6 14.5 1.5 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease TSKS PF15358.6 ORF77160 - 0.0001 20.9 4.1 0.00012 20.7 4.1 1.1 1 0 0 1 1 1 1 Testis-specific serine kinase substrate MAD PF05557.13 ORF77160 - 0.0017 16.8 16.3 0.002 16.6 16.3 1.0 1 0 0 1 1 1 1 Mitotic checkpoint protein TMF_DNA_bd PF12329.8 ORF77160 - 0.0018 18.2 13.1 0.0018 18.2 13.1 3.3 1 1 2 3 3 3 1 TATA element modulatory factor 1 DNA binding TMF_TATA_bd PF12325.8 ORF77160 - 0.0026 17.9 14.4 0.033 14.4 5.0 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding DUF5082 PF16888.5 ORF77160 - 0.0029 17.9 19.1 0.44 10.8 19.1 3.2 1 1 0 1 1 1 1 Domain of unknown function (DUF5082) PKcGMP_CC PF16808.5 ORF77160 - 0.0057 16.5 13.4 0.0089 15.9 0.6 4.0 2 1 2 4 4 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF4407 PF14362.6 ORF77160 - 0.0058 16.0 10.0 0.007 15.8 10.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Tropomyosin_1 PF12718.7 ORF77160 - 0.014 15.6 19.8 0.037 14.2 14.8 2.3 1 1 0 1 1 1 0 Tropomyosin like DHR10 PF18595.1 ORF77160 - 0.017 15.2 16.0 0.02 15.0 10.5 2.0 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain YscO PF07321.12 ORF77160 - 0.018 15.0 7.7 0.79 9.7 1.2 2.1 1 1 1 2 2 2 0 Type III secretion protein YscO ABC_tran_CTD PF16326.5 ORF77160 - 0.028 14.7 16.6 1.4 9.2 8.1 3.4 1 1 2 3 3 3 0 ABC transporter C-terminal domain Cluap1 PF10234.9 ORF77160 - 0.035 13.5 15.9 0.042 13.2 15.9 1.1 1 0 0 1 1 1 0 Clusterin-associated protein-1 DUF2730 PF10805.8 ORF77160 - 0.039 14.1 1.5 0.039 14.1 1.5 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF2730) SlyX PF04102.12 ORF77160 - 0.069 13.8 12.8 1.3 9.6 1.1 3.9 1 1 2 3 3 3 0 SlyX DAHP_snth_FXD PF18152.1 ORF77160 - 0.074 12.9 2.3 2.4 8.1 0.1 2.7 2 1 1 3 3 2 0 DAHP synthase ferredoxin-like domain FAM76 PF16046.5 ORF77160 - 0.075 12.4 16.9 0.62 9.4 16.9 2.3 1 1 0 1 1 1 0 FAM76 protein FliJ PF02050.16 ORF77160 - 0.078 13.2 12.0 0.91 9.8 1.4 2.7 1 1 1 2 2 2 0 Flagellar FliJ protein DUF4763 PF15960.5 ORF77160 - 0.094 12.0 10.9 0.36 10.1 0.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4763) Lir1 PF07207.11 ORF77160 - 0.098 12.9 0.3 0.13 12.5 0.3 1.2 1 0 0 1 1 1 0 Light regulated protein Lir1 DivIC PF04977.15 ORF77160 - 0.11 12.3 18.8 0.59 9.9 0.8 4.1 1 1 2 4 4 4 0 Septum formation initiator SOGA PF11365.8 ORF77160 - 0.11 13.6 11.6 0.17 13.0 2.3 3.6 1 1 1 2 2 2 0 Protein SOGA Spc7 PF08317.11 ORF77160 - 0.13 11.1 18.4 0.81 8.5 18.4 2.0 1 1 0 1 1 1 0 Spc7 kinetochore protein TPR_MLP1_2 PF07926.12 ORF77160 - 0.15 12.2 17.8 3.1 7.9 17.8 3.0 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Csm1_N PF18504.1 ORF77160 - 0.16 12.3 20.0 0.64 10.4 0.6 4.1 1 1 2 4 4 4 0 Csm1 N-terminal domain HIP1_clath_bdg PF16515.5 ORF77160 - 0.21 12.2 16.0 0.12 12.9 5.1 2.7 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 BCNT PF07572.12 ORF77160 - 0.21 11.7 3.1 0.16 12.0 1.1 2.1 1 1 1 2 2 2 0 Bucentaur or craniofacial development MCPsignal PF00015.21 ORF77160 - 0.22 11.3 10.2 0.17 11.7 6.3 2.2 1 1 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain UPF0242 PF06785.11 ORF77160 - 0.22 11.6 20.5 0.5 10.4 7.1 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Peptidase_M49 PF03571.15 ORF77160 - 0.23 9.8 6.4 0.24 9.7 6.4 1.1 1 0 0 1 1 1 0 Peptidase family M49 Jnk-SapK_ap_N PF09744.9 ORF77160 - 0.3 11.3 14.5 0.65 10.2 4.2 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 APG6_N PF17675.1 ORF77160 - 0.36 11.4 15.4 9 6.8 15.4 2.3 1 1 0 1 1 1 0 Apg6 coiled-coil region HemX PF04375.14 ORF77160 - 0.4 9.9 17.8 0.39 10.0 4.2 2.0 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase Prefoldin_2 PF01920.20 ORF77160 - 0.43 10.6 19.1 1.4 8.9 1.6 3.3 1 1 1 2 2 2 0 Prefoldin subunit DUF724 PF05266.14 ORF77160 - 0.52 10.1 14.6 1.5 8.6 14.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF724) PRKG1_interact PF15898.5 ORF77160 - 0.57 11.1 14.9 1.3 9.9 10.1 2.4 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Fib_alpha PF08702.10 ORF77160 - 0.61 10.3 19.7 0.32 11.2 9.7 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family NPV_P10 PF05531.12 ORF77160 - 0.67 10.5 15.0 0.097 13.1 3.9 2.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF4200 PF13863.6 ORF77160 - 0.69 10.3 18.8 3.6 8.0 13.3 2.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4200) Fmp27_WPPW PF10359.9 ORF77160 - 0.69 8.7 13.8 0.79 8.5 13.8 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain CENP-H PF05837.12 ORF77160 - 0.7 10.3 15.7 0.097 13.1 8.5 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) TMPIT PF07851.13 ORF77160 - 0.73 9.0 16.6 0.091 12.0 7.1 2.0 1 1 1 2 2 2 0 TMPIT-like protein Golgin_A5 PF09787.9 ORF77160 - 0.75 9.2 16.9 0.61 9.5 6.6 1.8 1 1 1 2 2 2 0 Golgin subfamily A member 5 Spectrin PF00435.21 ORF77160 - 0.75 10.3 10.8 0.91 10.0 5.8 2.3 1 1 1 2 2 2 0 Spectrin repeat TRAF_BIRC3_bd PF16673.5 ORF77160 - 0.8 9.5 8.3 4.1 7.3 0.1 3.4 1 1 1 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain XLF PF09302.11 ORF77160 - 0.85 9.8 18.6 0.76 9.9 0.4 3.8 1 1 3 4 4 4 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component TSC22 PF01166.18 ORF77160 - 0.87 9.9 12.8 18 5.7 0.1 4.4 1 1 3 4 4 4 0 TSC-22/dip/bun family Laminin_II PF06009.12 ORF77160 - 0.98 9.4 16.7 1.3 9.1 2.0 2.1 1 1 1 2 2 2 0 Laminin Domain II FapA PF03961.13 ORF77160 - 1.1 7.7 15.1 0.38 9.3 10.1 1.7 1 1 1 2 2 2 0 Flagellar Assembly Protein A Tup_N PF08581.10 ORF77160 - 1.2 9.5 13.6 0.83 10.0 0.7 3.0 1 1 2 3 3 3 0 Tup N-terminal DUF4140 PF13600.6 ORF77160 - 1.5 9.3 11.7 2.3e+02 2.3 11.7 2.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) YabA PF06156.13 ORF77160 - 1.8 9.2 11.3 0.66 10.6 4.5 2.7 1 1 1 2 2 2 0 Initiation control protein YabA Nas2_N PF18265.1 ORF77160 - 2.1 8.3 8.4 1.6 8.7 0.3 3.4 2 1 2 4 4 4 0 Nas2 N_terminal domain CCDC53 PF10152.9 ORF77160 - 2.1 8.8 10.7 5.6 7.4 5.2 2.0 1 1 1 2 2 2 0 Subunit CCDC53 of WASH complex DUF1664 PF07889.12 ORF77160 - 3 7.9 12.1 0.55 10.3 4.1 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Swi5 PF07061.11 ORF77160 - 3.1 7.9 19.0 7.4 6.7 1.3 3.8 1 1 1 2 2 1 0 Swi5 Atg14 PF10186.9 ORF77160 - 3.3 6.7 17.9 15 4.5 17.9 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Rho_Binding PF08912.11 ORF77160 - 3.7 8.4 16.8 0.4 11.5 3.1 3.1 1 1 1 3 3 3 0 Rho Binding DUF16 PF01519.16 ORF77160 - 3.9 8.0 17.3 8.2e+03 -2.7 17.3 3.2 1 1 0 1 1 0 0 Protein of unknown function DUF16 ZapB PF06005.12 ORF77160 - 3.9 8.0 16.2 2.7 8.5 7.5 2.9 1 1 1 2 2 2 0 Cell division protein ZapB DUF2203 PF09969.9 ORF77160 - 5.9 7.6 8.5 8 7.2 2.9 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Seryl_tRNA_N PF02403.22 ORF77160 - 6.4 7.0 21.2 0.82 9.9 4.3 2.2 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain BLOC1_2 PF10046.9 ORF77160 - 6.6 7.1 18.5 5.9 7.3 4.7 3.0 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4795 PF16043.5 ORF77160 - 7.5 6.1 16.8 0.5 9.9 2.9 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Chromo PF00385.24 ORF76523 - 1.7e-14 53.5 1.9 3.5e-14 52.5 1.9 1.5 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain ERGIC_N PF13850.6 ORF76370 - 0.012 16.0 0.1 0.02 15.3 0.0 1.5 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ribonuc_L-PSP PF01042.21 ORF73080 - 1e-32 112.7 0.1 1.1e-32 112.5 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF4181 PF13789.6 ORF71193 - 1.1 9.5 5.6 6.4 7.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4181) DUF2195 PF09961.9 ORF70751 - 0.11 12.4 0.1 0.18 11.7 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2195) PEX-1N PF09262.11 ORF69615 - 2.6e-10 40.6 0.0 4.9e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 Peroxisome biogenesis factor 1, N-terminal HutD PF05962.11 ORF69390 - 2.1e-21 76.7 0.1 2.4e-21 76.5 0.1 1.0 1 0 0 1 1 1 1 HutD Pkinase PF00069.25 ORF6882 - 4.6e-31 108.1 0.6 5.1e-31 108.0 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6882 - 1.6e-19 70.2 0.1 1.8e-19 70.0 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Cnd1 PF12717.7 ORF6882 - 0.045 13.8 0.1 0.049 13.7 0.1 1.2 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 Acyl_transf_3 PF01757.22 ORF68069 - 2.6e-06 26.7 2.2 3.2e-06 26.5 2.2 1.1 1 0 0 1 1 1 1 Acyltransferase family MCU PF04678.13 ORF67823 - 1e-11 45.2 3.1 1.7e-11 44.5 3.1 1.4 1 1 0 1 1 1 1 Mitochondrial calcium uniporter MORN PF02493.20 ORF67449 - 3.8e-31 105.1 45.1 6e-09 35.3 6.2 6.1 6 0 0 6 6 6 5 MORN repeat GST_N PF02798.20 ORF67199 - 1.2e-11 44.8 0.0 2.3e-11 43.8 0.0 1.5 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF67199 - 1.3e-11 44.7 0.0 2e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF67199 - 2.9e-06 27.5 0.0 4e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Ribosomal_S25 PF03297.15 ORF66384 - 1.9e-28 98.6 2.2 1.9e-28 98.6 2.2 2.1 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 ORF66384 - 0.0074 15.9 0.6 0.0091 15.6 0.6 1.2 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 ORF66384 - 0.065 12.9 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 ORF66384 - 0.3 11.5 6.8 13 6.2 6.8 2.2 1 1 0 1 1 1 0 Recombinase EamA PF00892.20 ORF65990 - 6.3e-08 32.9 14.0 7.4e-08 32.7 14.0 1.0 1 0 0 1 1 1 1 EamA-like transporter family HAS-barrel PF09378.10 ORF65336 - 0.2 11.9 0.0 1.1 9.5 0.0 1.8 2 0 0 2 2 2 0 HAS barrel domain PDCD2_C PF04194.13 ORF65050 - 1e-28 100.6 0.3 1.2e-28 100.4 0.3 1.0 1 0 0 1 1 1 1 Programmed cell death protein 2, C-terminal putative domain DUF3974 PF13120.6 ORF65050 - 0.22 11.7 0.0 0.28 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) ArfGap PF01412.18 ORF64858 - 0.16 12.1 3.5 0.15 12.1 1.8 1.8 2 1 0 2 2 2 0 Putative GTPase activating protein for Arf Utp12 PF04003.12 ORF64575 - 0.028 14.7 0.6 0.041 14.2 0.6 1.2 1 0 0 1 1 1 0 Dip2/Utp12 Family RAP1 PF07218.11 ORF64458 - 1.2 7.3 3.1 1.3 7.2 3.1 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) HMGL-like PF00682.19 ORF63912 - 1.8e-15 57.2 0.0 2.2e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 HMGL-like DUF1804 PF08822.11 ORF63912 - 0.096 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) Pkinase PF00069.25 ORF62701 - 1.8e-22 80.0 0.0 2.1e-22 79.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62701 - 0.00026 20.4 0.0 0.00029 20.2 0.0 1.3 1 1 0 1 1 1 1 Protein tyrosine kinase SET PF00856.28 ORF61945 - 0.0065 16.9 0.1 0.021 15.2 0.0 1.7 2 0 0 2 2 2 1 SET domain DUF3551 PF12071.8 ORF61541 - 0.049 13.7 2.7 0.078 13.0 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3551) Pkinase PF00069.25 ORF61206 - 3.6e-38 131.4 1.7 4e-38 131.3 1.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF61206 - 5.8e-23 81.5 0.1 6.4e-23 81.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF61206 - 0.00034 20.3 0.7 0.00044 19.9 0.7 1.2 1 0 0 1 1 1 1 RIO1 family FTA2 PF13095.6 ORF61206 - 0.0039 16.8 0.9 1.9 8.1 0.1 2.1 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF61206 - 0.093 12.6 0.0 5 7.0 0.0 2.0 1 1 1 2 2 2 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF61206 - 0.095 12.0 0.3 0.18 11.1 0.3 1.6 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family PWI PF01480.17 ORF60481 - 8.2e-05 22.9 0.8 0.00012 22.3 0.8 1.3 1 0 0 1 1 1 1 PWI domain NaeI PF09126.10 ORF60481 - 0.043 13.0 0.4 0.052 12.7 0.4 1.1 1 0 0 1 1 1 0 Restriction endonuclease NaeI Kei1 PF08552.11 ORF59972 - 0.026 14.4 0.1 0.033 14.1 0.1 1.2 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 Aminotran_1_2 PF00155.21 ORF59273 - 3.3e-05 23.2 0.0 3.8e-05 23.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Kinesin PF00225.23 ORF58036 - 4e-22 78.6 0.0 4.4e-22 78.4 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF58036 - 5.1e-11 42.7 0.0 8.9e-11 41.9 0.0 1.5 1 1 0 1 1 1 1 Microtubule binding DUF2633 PF11119.8 ORF57193 - 4.7 7.2 6.6 0.59 10.1 1.6 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2633) Glucosamine_iso PF01182.20 ORF57120 - 1.1e-08 35.2 0.1 1.4e-08 34.9 0.1 1.1 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Orn_Arg_deC_N PF02784.16 ORF56757 - 0.045 13.1 0.0 0.045 13.1 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Flp_Fap PF04964.14 ORF54755 - 0.00096 18.9 0.5 0.0024 17.7 0.0 1.8 2 0 0 2 2 2 1 Flp/Fap pilin component DUF2162 PF09930.9 ORF54169 - 0.04 13.3 0.0 0.05 13.0 0.0 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) AP2 PF00847.20 ORF54016 - 7.3e-06 26.1 0.2 0.13 12.5 0.1 2.6 2 1 0 2 2 2 2 AP2 domain DUF2583 PF10762.9 ORF53033 - 0.12 12.8 0.4 0.2 12.1 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2583) Cdc13_OB2 PF18691.1 ORF52867 - 0.028 14.5 0.6 0.044 13.9 0.6 1.4 1 1 0 1 1 1 0 Cell division control protein 13, OB2 domain Lip_prot_lig_C PF10437.9 ORF52867 - 0.057 13.4 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus Draxin PF15550.6 ORF52497 - 0.024 14.5 7.4 0.026 14.4 7.4 1.1 1 0 0 1 1 1 0 Draxin Inositol_P PF00459.25 ORF50903 - 0.058 12.9 0.8 0.062 12.8 0.8 1.2 1 0 0 1 1 1 0 Inositol monophosphatase family BK_channel_a PF03493.18 ORF50903 - 0.095 12.9 0.3 0.16 12.2 0.3 1.5 1 1 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit UBZ_FAAP20 PF15750.5 ORF50865 - 0.14 12.1 2.4 0.2 11.6 1.1 2.0 2 1 0 2 2 2 0 Ubiquitin-binding zinc-finger Peptidase_C58 PF03543.14 ORF50865 - 0.17 11.6 0.1 0.19 11.4 0.1 1.2 1 0 0 1 1 1 0 Yersinia/Haemophilus virulence surface antigen PGK PF00162.19 ORF5060 - 0.16 10.8 0.9 0.21 10.5 0.9 1.1 1 0 0 1 1 1 0 Phosphoglycerate kinase FYVE PF01363.21 ORF50597 - 7.6e-09 35.6 10.3 1.3e-08 34.9 10.3 1.3 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF50597 - 0.0042 17.3 8.9 0.0084 16.3 8.9 1.5 1 0 0 1 1 1 1 FYVE-type zinc finger zf-C2H2_6 PF13912.6 ORF50597 - 0.055 13.5 1.6 0.055 13.5 1.6 3.9 4 0 0 4 4 4 0 C2H2-type zinc finger Fibin PF15819.5 ORF4973 - 0.0025 17.6 2.1 0.0034 17.2 2.0 1.3 1 1 0 1 1 1 1 Fin bud initiation factor homologue DUF1664 PF07889.12 ORF4973 - 0.0039 17.2 1.5 0.0059 16.6 1.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 ORF4973 - 0.0044 17.3 2.3 0.0044 17.3 2.3 1.8 1 1 1 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 BRE1 PF08647.11 ORF4973 - 0.0048 17.0 5.1 0.0064 16.5 5.1 1.2 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase DUF2207 PF09972.9 ORF4973 - 0.0055 15.5 0.4 0.0069 15.2 0.4 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) SPATA1_C PF15743.5 ORF4973 - 0.018 15.1 0.6 0.022 14.8 0.6 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus Fib_alpha PF08702.10 ORF4973 - 0.032 14.4 4.7 0.14 12.3 4.6 1.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Pex24p PF06398.11 ORF4973 - 0.061 12.3 1.0 0.078 12.0 1.0 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin FAM76 PF16046.5 ORF4973 - 0.11 11.9 1.5 0.13 11.6 1.5 1.1 1 0 0 1 1 1 0 FAM76 protein NPV_P10 PF05531.12 ORF4973 - 0.26 11.8 6.3 0.84 10.1 2.0 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein zf-UBR PF02207.20 ORF47014 - 0.2 11.8 4.3 0.68 10.1 2.5 2.0 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Ribosomal_L7Ae PF01248.26 ORF46379 - 2.4e-20 72.0 0.1 3.7e-20 71.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Fer4_11 PF13247.6 ORF46379 - 0.04 14.0 0.0 0.06 13.5 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain RAP1 PF07218.11 ORF4592 - 1.2 7.3 3.1 1.3 7.2 3.1 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) MORN PF02493.20 ORF45676 - 3.8e-31 105.1 45.1 6e-09 35.3 6.2 6.1 6 0 0 6 6 6 5 MORN repeat Ribosomal_S25 PF03297.15 ORF44993 - 1.9e-28 98.6 2.2 1.9e-28 98.6 2.2 2.0 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 ORF44993 - 0.0073 15.9 0.5 0.009 15.6 0.5 1.1 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 ORF44993 - 0.066 12.9 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 ORF44993 - 0.22 11.9 6.0 10 6.6 6.0 2.2 1 1 0 1 1 1 0 Recombinase Skp1 PF01466.19 ORF43053 - 8e-24 83.5 1.5 1.8e-23 82.4 1.5 1.6 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF43053 - 0.012 15.7 0.1 0.026 14.7 0.1 1.6 1 0 0 1 1 1 0 Skp1 family, tetramerisation domain IFT46_B_C PF12317.8 ORF43053 - 0.015 15.0 0.1 0.018 14.8 0.1 1.1 1 0 0 1 1 1 0 Intraflagellar transport complex B protein 46 C terminal Homoserine_dh PF00742.19 ORF42314 - 6.4e-22 78.3 0.0 7.7e-22 78.0 0.0 1.0 1 0 0 1 1 1 1 Homoserine dehydrogenase adh_short_C2 PF13561.6 ORF40604 - 1.4e-25 90.2 0.3 1.5e-25 90.1 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF40604 - 3.5e-15 56.0 0.3 4.8e-15 55.5 0.3 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Ribosomal_S25 PF03297.15 ORF39312 - 1.9e-28 98.6 2.2 1.9e-28 98.6 2.2 2.1 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 ORF39312 - 0.0074 15.9 0.6 0.0091 15.6 0.6 1.2 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 ORF39312 - 0.065 12.9 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 ORF39312 - 0.3 11.5 6.8 13 6.2 6.8 2.2 1 1 0 1 1 1 0 Recombinase Sec1 PF00995.23 ORF39114 - 7.2e-06 25.5 0.0 8.6e-06 25.3 0.0 1.0 1 0 0 1 1 1 1 Sec1 family Hypoth_Ymh PF09509.10 ORF38680 - 0.059 13.3 0.0 0.077 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) AAA_11 PF13086.6 ORF38075 - 0.00012 21.9 0.0 0.00015 21.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF38075 - 0.0011 19.3 0.0 0.0016 18.8 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF38075 - 0.0016 18.2 0.1 0.002 17.9 0.1 1.2 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF38075 - 0.0017 18.1 0.0 0.0022 17.7 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_19 PF13245.6 ORF38075 - 0.0069 16.7 0.1 0.011 16.1 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 ORF38075 - 0.047 13.2 0.0 0.069 12.7 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Viral_helicase1 PF01443.18 ORF38075 - 0.061 13.1 0.0 0.079 12.7 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 ORF38075 - 0.063 13.6 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 ORF38075 - 0.083 12.3 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 ORF38075 - 0.093 13.1 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_5 PF07728.14 ORF38075 - 0.1 12.6 0.0 0.22 11.5 0.0 1.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) HGWP PF03578.15 ORF38075 - 0.14 11.7 0.0 0.25 10.9 0.0 1.3 1 0 0 1 1 1 0 HGWP repeat DUF2075 PF09848.9 ORF38075 - 0.23 10.7 0.0 0.32 10.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RNA12 PF10443.9 ORF38075 - 0.27 9.9 0.0 0.37 9.5 0.0 1.1 1 0 0 1 1 1 0 RNA12 protein UvrD-helicase PF00580.21 ORF38075 - 0.31 10.5 0.0 0.39 10.2 0.0 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain SVIP PF15811.5 ORF36968 - 0.01 16.3 2.7 0.01 16.3 2.7 2.3 2 0 0 2 2 2 0 Small VCP/p97-interacting protein FAM47 PF14642.6 ORF36968 - 0.13 11.8 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 FAM47 family ERGIC_N PF13850.6 ORF36894 - 0.00061 20.1 0.2 0.00083 19.7 0.2 1.4 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) MIG-14_Wnt-bd PF06664.12 ORF36894 - 0.01 15.1 1.0 0.014 14.7 1.0 1.2 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion ODV-E18 PF10717.9 ORF36894 - 0.019 14.8 0.6 0.031 14.1 0.6 1.3 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Baculo_11_kDa PF06143.11 ORF36894 - 0.081 12.5 1.4 0.13 11.8 1.4 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family TMEM156 PF15106.6 ORF36894 - 2 7.8 4.5 1.9 7.9 3.5 1.4 1 1 0 1 1 1 0 TMEM156 protein family SVIP PF15811.5 ORF36709 - 0.01 16.3 2.7 0.01 16.3 2.7 2.3 2 0 0 2 2 2 0 Small VCP/p97-interacting protein FAM47 PF14642.6 ORF36709 - 0.13 11.8 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 FAM47 family Tab2_like PF06485.11 ORF36705 - 0.021 14.4 0.0 0.021 14.4 0.0 1.1 1 0 0 1 1 1 0 RNA-binding protein Tab2/Atab2 LuxS PF02664.15 ORF36705 - 0.049 13.3 0.0 0.067 12.9 0.0 1.2 1 0 0 1 1 1 0 S-Ribosylhomocysteinase (LuxS) DSPc PF00782.20 ORF36685 - 8.9e-22 77.3 0.0 1.1e-21 77.0 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF36685 - 0.013 15.1 0.0 0.015 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase HCMV_UL124 PF17609.2 ORF36577 - 0.21 11.8 0.3 0.35 11.0 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function Nuc_deoxyri_tr2 PF15891.5 ORF36320 - 0.2 12.0 0.1 0.32 11.3 0.1 1.3 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase like Gemini_V2 PF01524.17 ORF36186 - 0.11 12.7 0.9 0.16 12.1 0.2 1.7 2 1 0 2 2 2 0 Geminivirus V2 protein Na_sulph_symp PF00939.19 ORF34242 - 2.2e-24 86.4 14.5 2.4e-24 86.2 14.5 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region SVIP PF15811.5 ORF34124 - 0.01 16.3 2.7 0.01 16.3 2.7 2.3 2 0 0 2 2 2 0 Small VCP/p97-interacting protein FAM47 PF14642.6 ORF34124 - 0.13 11.8 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 FAM47 family PSCyt3 PF07627.11 ORF33336 - 0.1 12.9 0.5 0.1 12.9 0.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1588) RNase_H2_suC PF08615.11 ORF33336 - 0.29 11.3 7.5 0.32 11.2 6.9 1.4 1 1 0 1 1 1 0 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) PI3K_1B_p101 PF10486.9 ORF33336 - 0.4 8.4 13.2 0.47 8.2 13.2 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit zf-UBR PF02207.20 ORF3310 - 0.2 11.8 4.3 0.68 10.1 2.5 2.0 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Sex_peptide PF08138.11 ORF3262 - 0.077 13.2 0.5 7.3 6.8 0.2 2.3 2 0 0 2 2 2 0 Sex peptide (SP) family DUF1970 PF09301.10 ORF32348 - 0.054 13.8 0.1 0.089 13.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1970) Phytase-like PF13449.6 ORF32348 - 0.073 13.0 0.0 0.089 12.7 0.0 1.1 1 0 0 1 1 1 0 Esterase-like activity of phytase ATP11 PF06644.11 ORF29915 - 0.029 14.2 12.2 0.037 13.8 12.2 1.1 1 0 0 1 1 1 0 ATP11 protein Exonuc_VII_L PF02601.15 ORF29915 - 0.15 11.6 9.1 0.17 11.4 9.1 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Kinase-PPPase PF03618.14 ORF29915 - 0.16 11.7 4.7 0.27 11.0 4.7 1.3 1 1 0 1 1 1 0 Kinase/pyrophosphorylase DUF99 PF01949.16 ORF29915 - 0.48 9.8 3.4 1.3 8.4 3.2 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF99 Pox_A_type_inc PF04508.12 ORF29915 - 0.5 10.3 0.0 0.5 10.3 0.0 3.0 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat CDC45 PF02724.14 ORF29915 - 0.58 8.4 11.9 0.68 8.2 11.9 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4407 PF14362.6 ORF29915 - 0.7 9.2 8.7 0.96 8.7 8.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PA26 PF04636.13 ORF29915 - 1.3 7.8 10.0 1.5 7.7 10.0 1.0 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) DUF1104 PF06518.11 ORF29915 - 1.4 9.3 20.4 0.89 10.0 18.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1104) DUF883 PF05957.13 ORF29915 - 1.5 9.4 10.2 1.4 9.6 8.8 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) DUF1081 PF06448.11 ORF29915 - 1.6 9.1 7.0 16 5.9 7.0 2.2 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1081) Ureide_permease PF07168.11 ORF29915 - 2.1 7.0 6.0 2.5 6.8 6.0 1.1 1 0 0 1 1 1 0 Ureide permease Borrelia_P83 PF05262.11 ORF29915 - 2.3 6.6 19.8 2.5 6.5 19.8 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein Vfa1 PF08432.10 ORF29915 - 4.1 7.7 19.8 5.1 7.4 19.8 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF3752 PF12572.8 ORF29915 - 4.7 7.7 16.6 30 5.1 16.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3752) V_ATPase_I PF01496.19 ORF29915 - 6.5 4.5 12.3 6.9 4.5 12.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family AbiH PF14253.6 ORF29915 - 9.7 6.0 12.0 13 5.5 11.8 1.3 1 1 0 1 1 1 0 Bacteriophage abortive infection AbiH SeqA PF03925.13 ORF29717 - 0.00062 19.7 2.5 0.94 9.5 0.0 2.9 2 1 1 3 3 3 2 SeqA protein C-terminal domain Preseq_ALAS PF09029.10 ORF29717 - 0.025 15.1 2.9 4.6 7.8 0.5 3.4 1 1 2 3 3 3 0 5-aminolevulinate synthase presequence CD20 PF04103.15 ORF29717 - 0.032 14.3 2.2 1.7 8.7 0.0 3.0 3 1 0 3 3 3 0 CD20-like family Thioredoxin PF00085.20 ORF29282 - 1.5e-10 41.0 0.0 1.9e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin AtpR PF12966.7 ORF29282 - 0.042 14.3 0.2 0.066 13.7 0.2 1.3 1 0 0 1 1 1 0 N-ATPase, AtpR subunit LtrA PF06772.11 ORF29282 - 0.045 13.0 0.0 0.062 12.5 0.0 1.1 1 0 0 1 1 1 0 Bacterial low temperature requirement A protein (LtrA) Kinesin PF00225.23 ORF26109 - 6e-37 127.3 0.2 6.7e-37 127.2 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF26109 - 7.3e-11 42.2 0.0 1.3e-10 41.4 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding SWI2_SNF2 PF18766.1 ORF26109 - 0.0057 16.3 0.1 0.0077 15.9 0.1 1.2 1 0 0 1 1 1 1 SWI2/SNF2 ATPase AAA_16 PF13191.6 ORF26109 - 0.0068 16.8 0.0 0.008 16.6 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain ResIII PF04851.15 ORF26109 - 0.022 14.8 1.9 0.053 13.5 1.9 1.6 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 ORF26109 - 0.037 13.8 0.1 0.049 13.3 0.1 1.4 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 ORF26109 - 0.054 12.6 0.1 2.3 7.2 0.0 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_22 PF13401.6 ORF26109 - 0.12 12.7 0.1 0.17 12.2 0.1 1.5 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF26109 - 0.53 10.3 4.5 2.4 8.2 4.5 2.0 1 1 0 1 1 1 0 Helicase HerA, central domain RAP1 PF07218.11 ORF24901 - 1.2 7.3 3.1 1.3 7.2 3.1 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) ApoLp-III PF07464.11 ORF24646 - 0.061 13.4 0.1 2.3 8.3 0.0 2.2 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DUF2633 PF11119.8 ORF23439 - 4.7 7.2 6.6 0.59 10.1 1.6 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2633) DUF5082 PF16888.5 ORF22716 - 0.00043 20.6 2.7 0.00043 20.6 2.7 2.1 1 1 0 2 2 2 1 Domain of unknown function (DUF5082) DivIC PF04977.15 ORF22716 - 0.013 15.3 9.0 0.044 13.6 1.5 2.2 2 0 0 2 2 2 0 Septum formation initiator CCDC92 PF14916.6 ORF22716 - 0.028 14.2 1.1 0.028 14.2 1.1 2.4 2 1 1 3 3 3 0 Coiled-coil domain of unknown function FlaC_arch PF05377.11 ORF22716 - 0.058 13.8 8.9 0.075 13.4 1.5 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) HTH_25 PF13413.6 ORF22716 - 0.065 13.1 0.7 0.22 11.4 0.1 2.3 2 1 1 3 3 3 0 Helix-turn-helix domain bZIP_1 PF00170.21 ORF22716 - 0.13 12.3 11.4 1.3 9.1 2.2 2.5 2 0 0 2 2 2 0 bZIP transcription factor PRKG1_interact PF15898.5 ORF22716 - 0.16 12.9 9.8 0.26 12.2 9.7 1.5 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Shugoshin_N PF07558.11 ORF22716 - 0.16 11.9 6.2 1 9.3 0.2 2.4 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region bZIP_2 PF07716.15 ORF22716 - 0.58 10.3 10.3 1.4 9.0 1.1 2.9 2 1 0 2 2 2 0 Basic region leucine zipper APG6_N PF17675.1 ORF22716 - 0.72 10.4 17.0 0.55 10.8 11.8 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region TSC22 PF01166.18 ORF22716 - 1.1 9.6 11.0 7.4 7.0 2.8 3.1 1 1 2 3 3 3 0 TSC-22/dip/bun family TM231 PF10149.9 ORF22716 - 1.5 8.1 4.9 6.2 6.1 0.9 2.0 2 0 0 2 2 2 0 Transmembrane protein 231 ZapB PF06005.12 ORF22716 - 2.5 8.6 16.9 2 8.9 6.4 2.6 1 1 1 2 2 2 0 Cell division protein ZapB YabA PF06156.13 ORF22716 - 2.7 8.7 12.7 1.5 9.5 2.1 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF5320 PF17253.2 ORF22716 - 3.9 8.6 4.2 26 6.0 0.7 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) TMF_DNA_bd PF12329.8 ORF22716 - 10 6.2 20.0 2.7 8.1 3.0 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Aa_trans PF01490.18 ORF22151 - 1.9e-08 33.4 10.6 2e-08 33.4 10.6 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein U-box PF04564.15 ORF22003 - 8.9e-19 67.5 0.0 2.6e-18 66.0 0.0 1.7 2 0 0 2 2 2 1 U-box domain zf-Nse PF11789.8 ORF22003 - 1.5e-06 27.9 0.0 2.4e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 ORF22003 - 0.00013 21.9 0.0 0.00019 21.4 0.0 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-NOSIP PF15906.5 ORF22003 - 0.0069 16.5 0.0 0.0096 16.0 0.0 1.3 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein DUF4064 PF13273.6 ORF22003 - 0.039 14.2 0.0 0.051 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) zf-C3HC4_4 PF15227.6 ORF22003 - 0.14 12.3 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING RPN7 PF10602.9 ORF2184 - 1.8e-07 31.1 0.0 1.9e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 26S proteasome subunit RPN7 KIAA1430 PF13879.6 ORF20262 - 2.7e-12 47.3 7.6 2.7e-12 47.3 7.6 2.0 2 0 0 2 2 2 1 KIAA1430 homologue Adenylsucc_synt PF00709.21 ORF18948 - 0.14 11.1 0.1 0.15 10.9 0.1 1.1 1 0 0 1 1 1 0 Adenylosuccinate synthetase SelK_SelG PF10961.8 ORF17998 - 0.19 12.3 0.2 0.36 11.5 0.2 1.4 1 0 0 1 1 1 0 Selenoprotein SelK_SelG PP2C PF00481.21 ORF1712 - 3.6e-12 46.5 0.0 4e-12 46.3 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF1712 - 0.01 15.8 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) EF-hand_8 PF13833.6 ORF16733 - 1.3e-06 28.1 1.1 3.2e-06 26.9 1.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF16733 - 2.6e-06 26.6 0.5 9.3e-06 24.8 0.5 2.0 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 ORF16733 - 7e-05 22.1 1.7 0.00017 20.9 1.3 2.0 1 1 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF16733 - 9.5e-05 22.8 0.7 0.00026 21.4 0.7 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF16733 - 0.00022 20.9 0.4 0.00022 20.9 0.4 2.4 3 0 0 3 3 3 1 EF-hand domain p25-alpha PF05517.12 ORF16733 - 0.018 15.2 0.2 0.018 15.2 0.2 1.8 1 1 0 2 2 2 0 p25-alpha EF-hand_4 PF12763.7 ORF16733 - 0.018 15.0 0.2 0.032 14.2 0.2 1.5 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand NicO PF03824.16 ORF1639 - 7.4e-14 51.8 8.4 8.6e-14 51.5 8.4 1.0 1 0 0 1 1 1 1 High-affinity nickel-transport protein EF-hand_6 PF13405.6 ORF16117 - 4.6e-07 29.2 0.0 1.5e-06 27.6 0.0 1.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF16117 - 2.2e-06 26.8 0.0 5.4e-06 25.6 0.0 1.7 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF16117 - 1.2e-05 25.6 0.0 2e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair Pkinase PF00069.25 ORF16117 - 6.1e-05 22.5 0.0 9.7e-05 21.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain EF-hand_8 PF13833.6 ORF16117 - 0.00013 21.7 0.0 0.00071 19.4 0.0 2.1 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF16117 - 0.00044 19.6 0.0 0.0017 17.8 0.0 2.1 1 1 0 1 1 1 1 EF hand DUF1084 PF06454.11 ORF16117 - 0.039 13.3 0.0 0.045 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DUF3349 PF11829.8 ORF16117 - 0.054 14.3 0.7 0.085 13.6 0.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3349) Phosphonate-bd PF12974.7 ORF16117 - 0.078 12.6 0.3 0.15 11.7 0.2 1.5 1 1 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein DC_STAMP PF07782.13 ORF1565 - 0.06 13.2 0.1 0.082 12.7 0.1 1.3 1 0 0 1 1 1 0 DC-STAMP-like protein LRR_6 PF13516.6 ORF14143 - 2.3e-05 24.1 0.0 0.061 13.4 0.0 3.0 3 0 0 3 3 3 2 Leucine Rich repeat Thioredoxin PF00085.20 ORF13999 - 1.5e-10 41.0 0.0 1.9e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin AtpR PF12966.7 ORF13999 - 0.042 14.3 0.2 0.066 13.7 0.2 1.3 1 0 0 1 1 1 0 N-ATPase, AtpR subunit LtrA PF06772.11 ORF13999 - 0.045 13.0 0.0 0.062 12.5 0.0 1.1 1 0 0 1 1 1 0 Bacterial low temperature requirement A protein (LtrA) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks166.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks166.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks166.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks166.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PTPS PF01242.19 ORF13572 - 0.17 11.9 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase MSA-2c PF12238.8 ORF1254 - 1.7 8.6 5.7 1.9 8.4 5.7 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF2633 PF11119.8 ORF112526 - 4.7 7.2 6.6 0.59 10.1 1.6 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2633) HMGL-like PF00682.19 ORF111918 - 1.8e-15 57.2 0.0 2.2e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 HMGL-like DUF1804 PF08822.11 ORF111918 - 0.096 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) Gemini_V2 PF01524.17 ORF111818 - 0.11 12.7 0.9 0.16 12.1 0.2 1.7 2 1 0 2 2 2 0 Geminivirus V2 protein PrpF PF04303.13 ORF110927 - 9.4e-16 57.7 0.4 1.1e-15 57.5 0.4 1.1 1 0 0 1 1 1 1 PrpF protein Pkinase PF00069.25 ORF110608 - 4.6e-31 108.1 0.6 5.1e-31 108.0 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF110608 - 1.6e-19 70.2 0.1 1.8e-19 70.0 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Cnd1 PF12717.7 ORF110608 - 0.045 13.8 0.1 0.049 13.7 0.1 1.2 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 DUF334 PF03904.13 ORF110401 - 0.34 10.4 5.0 0.74 9.3 5.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF334) TPIP1 PF15338.6 ORF109393 - 0.069 13.2 1.9 0.088 12.9 0.9 1.7 2 0 0 2 2 2 0 p53-regulated apoptosis-inducing protein 1 Aldo_ket_red PF00248.21 ORF10931 - 2.5e-15 56.4 0.0 1e-14 54.4 0.0 1.7 1 1 0 1 1 1 1 Aldo/keto reductase family O-ag_pol_Wzy PF14296.6 ORF109113 - 0.0011 17.7 0.5 0.0013 17.4 0.5 1.1 1 0 0 1 1 1 1 O-antigen polysaccharide polymerase Wzy Nucleoside_tran PF01733.18 ORF109113 - 0.0015 18.0 0.0 0.0017 17.8 0.0 1.1 1 0 0 1 1 1 1 Nucleoside transporter Sigma_reg_N PF13800.6 ORF109113 - 0.0019 18.5 0.2 0.0029 17.9 0.2 1.3 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF4834 PF16118.5 ORF109113 - 0.0042 18.0 0.3 0.0057 17.6 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) Ac76 PF05814.11 ORF109113 - 0.0099 15.9 1.7 0.02 14.9 1.7 1.5 1 0 0 1 1 1 1 Orf76 (Ac76) SID-1_RNA_chan PF13965.6 ORF109113 - 0.017 13.6 0.4 0.02 13.4 0.4 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF3139 PF11337.8 ORF109113 - 0.02 15.6 0.6 0.03 15.0 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) DUF4083 PF13314.6 ORF109113 - 0.022 14.7 3.4 0.038 13.9 3.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) DUF4446 PF14584.6 ORF109113 - 0.036 14.0 0.3 0.055 13.5 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF5385 PF17359.2 ORF109113 - 0.043 13.4 0.3 0.057 13.0 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5385) CcmE PF03100.15 ORF109113 - 0.053 13.5 0.1 0.082 12.9 0.1 1.2 1 0 0 1 1 1 0 CcmE ECSCR PF15820.5 ORF109113 - 0.053 13.3 0.0 0.068 13.0 0.0 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Pex24p PF06398.11 ORF109113 - 0.058 12.4 0.0 0.063 12.3 0.0 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2981 PF11200.8 ORF109113 - 0.059 13.1 0.1 0.061 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) DUF2572 PF10833.8 ORF109113 - 0.062 13.0 1.2 0.13 12.0 0.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2572) EphA2_TM PF14575.6 ORF109113 - 0.077 13.9 0.0 0.11 13.4 0.0 1.3 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Tmemb_9 PF05434.11 ORF109113 - 0.12 12.3 0.1 0.15 11.9 0.1 1.2 1 0 0 1 1 1 0 TMEM9 Pilin_N PF07790.11 ORF109113 - 0.12 13.3 0.0 0.19 12.7 0.0 1.4 1 0 0 1 1 1 0 Archaeal Type IV pilin, N-terminal DUF2615 PF11027.8 ORF109113 - 0.13 12.4 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) ATP-synt_8 PF00895.20 ORF109113 - 1.2 9.7 4.2 2.9 8.4 4.2 1.8 1 1 0 1 1 1 0 ATP synthase protein 8 DUF1681 PF07933.14 ORF108041 - 0.062 13.0 0.0 0.062 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) SOG2 PF10428.9 ORF106016 - 1.5 7.9 9.6 1.7 7.7 9.6 1.0 1 0 0 1 1 1 0 RAM signalling pathway protein DUF2706 PF10913.8 ORF105132 - 0.81 9.6 2.9 8 6.4 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2706) DUF1759 PF03564.15 ORF104861 - 0.0061 16.5 0.4 0.009 16.0 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) Phage_Gp23 PF10669.9 ORF104861 - 0.3 11.4 3.6 0.44 10.9 3.6 1.3 1 1 0 1 1 1 0 Protein gp23 (Bacteriophage A118) zf-UBR PF02207.20 ORF104394 - 0.18 12.0 4.3 0.68 10.1 2.5 2.0 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) CAF1A PF12253.8 ORF104107 - 0.2 11.9 7.1 0.28 11.4 7.1 1.2 1 0 0 1 1 1 0 Chromatin assembly factor 1 subunit A RNase_H2_suC PF08615.11 ORF103066 - 0.00079 19.6 0.8 0.0012 19.0 0.8 1.3 1 0 0 1 1 1 1 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) PI3K_1B_p101 PF10486.9 ORF103066 - 0.25 9.1 12.7 0.29 8.9 12.7 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit PSCyt3 PF07627.11 ORF103066 - 0.31 11.4 2.3 0.29 11.4 1.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1588) zf-UBR PF02207.20 ORF102502 - 0.2 11.8 4.3 0.68 10.1 2.5 2.0 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) HTH_31 PF13560.6 ORF10239 - 0.021 15.1 0.1 0.034 14.5 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Kinesin PF00225.23 ORF101828 - 6e-37 127.3 0.2 6.7e-37 127.2 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF101828 - 7.3e-11 42.2 0.0 1.3e-10 41.4 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding SWI2_SNF2 PF18766.1 ORF101828 - 0.0057 16.3 0.1 0.0077 15.9 0.1 1.2 1 0 0 1 1 1 1 SWI2/SNF2 ATPase AAA_16 PF13191.6 ORF101828 - 0.0068 16.8 0.0 0.008 16.6 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain ResIII PF04851.15 ORF101828 - 0.022 14.8 1.9 0.053 13.5 1.9 1.6 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 ORF101828 - 0.037 13.8 0.1 0.049 13.3 0.1 1.4 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 ORF101828 - 0.054 12.6 0.1 2.3 7.2 0.0 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_22 PF13401.6 ORF101828 - 0.12 12.7 0.1 0.17 12.2 0.1 1.5 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF101828 - 0.53 10.3 4.5 2.4 8.2 4.5 2.0 1 1 0 1 1 1 0 Helicase HerA, central domain DNA_III_psi PF03603.13 ORF10098 - 3.6e-44 150.0 0.1 4.1e-44 149.8 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase III psi subunit CSTF_C PF14304.6 ORF10098 - 0.00017 21.1 0.4 0.00043 19.8 0.4 1.7 1 0 0 1 1 1 1 Transcription termination and cleavage factor C-terminal PP-binding PF00550.25 ORF100755 - 5.4e-11 42.7 0.1 8.1e-11 42.1 0.1 1.3 1 0 0 1 1 1 1 Phosphopantetheine attachment site Lon_C PF05362.13 ORF100511 - 5.9e-42 143.5 0.0 6.4e-42 143.4 0.0 1.0 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain ChlI PF13541.6 ORF100511 - 8.6e-06 25.6 0.0 9.2e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase SNARE_assoc PF09335.11 ORF100424 - 7.9 7.0 10.0 0.11 13.0 0.5 2.0 1 1 1 2 2 2 0 SNARE associated Golgi protein LysR_substrate PF03466.20 ORF100134 - 1.2e-20 73.8 0.1 1.3e-20 73.7 0.1 1.0 1 0 0 1 1 1 1 LysR substrate binding domain HMW1C_N PF18071.1 NODE_47303_length_406_cov_1.687332_g39460_i0forward_frame_1 - 0.0063 16.3 2.3 0.0076 16.1 2.3 1.1 1 0 0 1 1 1 1 HMW1C N-terminal DUF4698 PF15769.5 NODE_47302_length_406_cov_1.706199_g39459_i0reverse_frame_1 - 0.0054 15.8 6.1 0.0062 15.7 6.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4698) TBCC PF07986.12 NODE_47300_length_406_cov_1.916442_g39457_i0forward_frame_1 - 0.048 13.4 0.8 1.5 8.6 0.0 2.1 2 0 0 2 2 2 0 Tubulin binding cofactor C Terpene_synth_C PF03936.16 NODE_47295_length_406_cov_2.204852_g39452_i0reverse_frame_1 - 0.08 12.3 0.3 0.096 12.0 0.3 1.1 1 0 0 1 1 1 0 Terpene synthase family, metal binding domain Ank_4 PF13637.6 NODE_47294_length_406_cov_2.226415_g39451_i0forward_frame_1 - 0.0069 16.9 0.2 0.017 15.7 0.2 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) TPM_phosphatase PF04536.14 NODE_47291_length_406_cov_2.512129_g39448_i0reverse_frame_1 - 3.2e-17 62.8 0.3 4.2e-17 62.5 0.3 1.2 1 0 0 1 1 1 1 TPM domain MOLO1 PF17175.4 NODE_47291_length_406_cov_2.512129_g39448_i0reverse_frame_1 - 0.0028 17.8 0.2 0.0097 16.0 0.2 1.8 1 1 0 1 1 1 1 Modulator of levamisole receptor-1 CCB2_CCB4 PF11152.8 NODE_47291_length_406_cov_2.512129_g39448_i0reverse_frame_1 - 0.084 12.2 0.3 0.13 11.6 0.2 1.4 1 1 0 1 1 1 0 Cofactor assembly of complex C subunit B, CCB2/CCB4 IF3_C PF00707.22 NODE_47289_length_406_cov_2.530997_g39446_i0reverse_frame_1 - 0.11 12.4 0.1 0.19 11.7 0.1 1.6 1 1 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain DUF1899 PF08953.11 NODE_47287_length_406_cov_2.778976_g39444_i0reverse_frame_1 - 0.008 16.0 0.4 0.012 15.5 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1899) ANAPC4_WD40 PF12894.7 NODE_47274_length_406_cov_58.272237_g39431_i0forward_frame_1 - 4.2e-05 23.8 0.0 0.041 14.2 0.0 2.2 2 0 0 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 NODE_47274_length_406_cov_58.272237_g39431_i0forward_frame_1 - 0.0016 17.5 0.1 0.011 14.7 0.0 2.0 1 1 1 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40 PF00400.32 NODE_47274_length_406_cov_58.272237_g39431_i0forward_frame_1 - 0.013 16.4 0.0 0.2 12.6 0.0 2.1 2 0 0 2 2 2 0 WD domain, G-beta repeat IL8 PF00048.20 NODE_47258_length_406_cov_99.924528_g39416_i0forward_frame_1 - 0.077 13.2 0.1 0.19 11.9 0.0 1.6 1 1 1 2 2 2 0 Small cytokines (intecrine/chemokine), interleukin-8 like CDH1_2_SANT_HL1 PF18375.1 NODE_47254_length_406_cov_110.285714_g39412_i0forward_frame_1 - 0.085 13.5 0.0 0.13 12.9 0.0 1.2 1 0 0 1 1 1 0 CDH1/2 SANT-Helical linker 1 YwiC PF14256.6 NODE_47244_length_406_cov_174.495957_g39403_i0forward_frame_1 - 0.11 12.8 0.8 0.17 12.2 0.8 1.3 1 0 0 1 1 1 0 YwiC-like protein NPCC PF08058.11 NODE_47234_length_406_cov_425.180593_g36523_i1forward_frame_1 - 0.11 12.5 0.8 0.15 12.1 0.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component RPAP2_Rtr1 PF04181.13 NODE_47233_length_406_cov_490.582210_g39393_i0reverse_frame_1 - 0.041 14.2 0.1 0.073 13.4 0.1 1.4 1 0 0 1 1 1 0 Rtr1/RPAP2 family ABC_tran PF00005.27 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 1.1e-13 51.8 0.0 1.6e-13 51.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 5.3e-05 23.2 0.0 6.5e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.0024 17.6 0.0 0.0039 16.9 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.0045 17.4 0.0 0.007 16.8 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.0097 15.8 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_28 PF13521.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.0098 16.1 0.1 0.014 15.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.018 15.3 0.1 0.033 14.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.024 14.3 0.0 0.03 14.0 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_23 PF13476.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.034 14.7 0.0 0.044 14.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.057 13.2 0.0 0.078 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system NACHT PF05729.12 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.069 13.1 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.071 13.1 0.0 0.46 10.5 0.1 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) G-alpha PF00503.20 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.077 12.1 0.0 0.083 12.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_25 PF13481.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.097 12.2 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.1 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase Viral_helicase1 PF01443.18 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.12 12.1 0.1 0.21 11.3 0.1 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase UCH PF00443.29 NODE_47225_length_407_cov_1.803763_g39387_i0reverse_frame_1 - 0.1 12.1 1.6 1.2 8.6 0.4 2.1 1 1 1 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase Rho_RNA_bind PF07497.12 NODE_47217_length_407_cov_2.131720_g39379_i0reverse_frame_1 - 0.095 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain DUF4940 PF16298.5 NODE_47200_length_407_cov_3.663978_g39362_i0forward_frame_1 - 0.027 14.2 0.2 0.03 14.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4940) 2OG-Fe_Oxy_2 PF10014.9 NODE_47196_length_407_cov_56.610215_g39358_i0forward_frame_1 - 0.097 12.5 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 2OG-Fe dioxygenase Ku_PK_bind PF08785.11 NODE_47194_length_407_cov_57.634409_g39356_i0reverse_frame_1 - 0.14 12.3 2.1 0.24 11.5 1.2 1.7 1 1 1 2 2 2 0 Ku C terminal domain like PCRF PF03462.18 NODE_47194_length_407_cov_57.634409_g39356_i0reverse_frame_1 - 2.2 8.1 5.8 17 5.2 4.3 1.9 1 1 1 2 2 2 0 PCRF domain Sid-5 PF17204.3 NODE_47163_length_407_cov_202.204301_g39326_i0reverse_frame_1 - 6.2 7.1 7.5 8.4 6.7 0.8 2.4 2 1 0 2 2 2 0 Sid-5 family fn2 PF00040.19 NODE_47156_length_407_cov_683.712366_g39319_i0forward_frame_1 - 0.23 11.7 1.6 0.4 11.0 1.6 1.4 1 0 0 1 1 1 0 Fibronectin type II domain MFS_1 PF07690.16 NODE_47149_length_408_cov_1.756032_g39314_i0forward_frame_1 - 0.00061 18.8 16.0 0.0007 18.6 16.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Nodulin-like PF06813.13 NODE_47149_length_408_cov_1.756032_g39314_i0forward_frame_1 - 0.002 17.6 1.4 0.0027 17.2 1.4 1.1 1 0 0 1 1 1 1 Nodulin-like Mito_carr PF00153.27 NODE_47145_length_408_cov_2.128686_g39310_i0reverse_frame_1 - 9.2e-06 25.5 0.0 0.0053 16.6 0.0 2.2 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF16 PF01519.16 NODE_47141_length_408_cov_2.329759_g39306_i0forward_frame_1 - 8.4e-05 23.0 3.5 0.0021 18.5 2.5 2.1 1 1 1 2 2 2 2 Protein of unknown function DUF16 THOC7 PF05615.13 NODE_47141_length_408_cov_2.329759_g39306_i0forward_frame_1 - 0.26 11.6 2.6 0.35 11.1 0.4 2.1 2 1 0 2 2 2 0 Tho complex subunit 7 SlyX PF04102.12 NODE_47141_length_408_cov_2.329759_g39306_i0forward_frame_1 - 0.32 11.6 1.9 2.8 8.6 0.2 2.2 2 0 0 2 2 2 0 SlyX Lipase_C PF18067.1 NODE_47135_length_408_cov_3.493298_g39300_i0reverse_frame_1 - 0.18 12.4 0.2 0.3 11.7 0.2 1.3 1 0 0 1 1 1 0 Lipase C-terminal domain DUF2162 PF09930.9 NODE_47134_length_408_cov_4.345845_g39299_i0reverse_frame_1 - 0.0034 16.8 0.4 0.0041 16.6 0.4 1.1 1 0 0 1 1 1 1 Predicted transporter (DUF2162) Cdc13_OB2 PF18691.1 NODE_47129_length_408_cov_33.962466_g39294_i0reverse_frame_1 - 0.082 13.0 0.2 0.12 12.4 0.2 1.2 1 0 0 1 1 1 0 Cell division control protein 13, OB2 domain Yae1_N PF09811.9 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_1 - 0.00012 21.7 23.5 0.07 12.9 3.5 4.3 2 1 1 3 3 3 3 Essential protein Yae1, N terminal SARAF PF06682.12 NODE_47119_length_408_cov_72.597855_g39284_i0reverse_frame_1 - 0.0065 16.2 2.0 0.0065 16.2 2.0 1.1 1 0 0 1 1 1 1 SOCE-associated regulatory factor of calcium homoeostasis SUIM_assoc PF16619.5 NODE_47119_length_408_cov_72.597855_g39284_i0reverse_frame_1 - 0.063 13.4 9.4 0.13 12.3 9.4 1.6 1 1 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 Presenilin PF01080.17 NODE_47119_length_408_cov_72.597855_g39284_i0reverse_frame_1 - 4.4 6.0 4.5 4.4 6.0 4.5 1.1 1 0 0 1 1 1 0 Presenilin Mito_carr PF00153.27 NODE_47116_length_408_cov_74.745308_g39281_i0reverse_frame_1 - 1.9e-07 30.9 0.1 2.5e-07 30.5 0.1 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein MMM1 PF10296.9 NODE_47094_length_408_cov_138.013405_g39259_i0reverse_frame_1 - 0.1 11.6 0.1 0.12 11.4 0.1 1.1 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Pkinase PF00069.25 NODE_47092_length_408_cov_151.029491_g39257_i0forward_frame_1 - 6.5e-07 29.0 0.0 1e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain InPase PF18823.1 NODE_47083_length_408_cov_254.892761_g39248_i0forward_frame_1 - 0.23 11.2 0.1 0.29 10.8 0.1 1.1 1 0 0 1 1 1 0 Inorganic Pyrophosphatase Ocnus PF05005.15 NODE_47075_length_408_cov_1483.174263_g39240_i0reverse_frame_1 - 5.3e-30 103.7 0.2 7.1e-30 103.3 0.2 1.1 1 0 0 1 1 1 1 Janus/Ocnus family (Ocnus) zf-C2H2_2 PF12756.7 NODE_47066_length_409_cov_1.695187_g39231_i0reverse_frame_3 - 2.4 8.6 4.7 0.62 10.4 0.3 1.9 2 0 0 2 2 2 0 C2H2 type zinc-finger (2 copies) DUF2551 PF10826.8 NODE_47059_length_409_cov_2.211230_g39224_i0reverse_frame_2 - 0.018 15.3 0.1 0.026 14.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2551) Plus-3 PF03126.18 NODE_47055_length_409_cov_2.368984_g39220_i0forward_frame_2 - 3.2e-13 50.2 0.3 3.8e-12 46.7 0.1 2.1 2 1 0 2 2 2 1 Plus-3 domain PTP2 PF17022.5 NODE_47053_length_409_cov_2.409091_g39218_i0forward_frame_3 - 0.0069 16.0 0.1 0.0095 15.6 0.1 1.1 1 0 0 1 1 1 1 Polar tube protein 2 from Microsporidia Hamartin PF04388.12 NODE_47049_length_409_cov_2.983957_g39214_i0reverse_frame_3 - 0.072 11.7 5.4 0.08 11.6 5.4 1.0 1 0 0 1 1 1 0 Hamartin protein DJ-1_PfpI PF01965.24 NODE_47049_length_409_cov_2.983957_g39214_i0reverse_frame_2 - 0.032 14.0 0.1 0.037 13.8 0.1 1.1 1 0 0 1 1 1 0 DJ-1/PfpI family Protamine_P1 PF00260.20 NODE_47048_length_409_cov_3.203209_g39213_i0reverse_frame_3 - 0.9 9.7 23.2 4.6 7.4 1.3 2.6 2 0 0 2 2 2 0 Protamine P1 Glyco_hydro_77 PF02446.17 NODE_47048_length_409_cov_3.203209_g39213_i0reverse_frame_2 - 4.2e-17 62.2 0.0 4.6e-17 62.0 0.0 1.0 1 0 0 1 1 1 1 4-alpha-glucanotransferase cNMP_binding PF00027.29 NODE_47046_length_409_cov_3.425134_g39211_i0forward_frame_3 - 1.1e-06 28.6 0.0 1.8e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Ribosomal_L40e PF01020.17 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_2 - 0.043 13.7 0.8 0.11 12.5 0.8 1.7 1 0 0 1 1 1 0 Ribosomal L40e family Unpaired PF15972.5 NODE_47045_length_409_cov_3.475936_g39210_i0forward_frame_3 - 0.081 12.4 0.0 0.087 12.4 0.0 1.1 1 0 0 1 1 1 0 Unpaired protein SdpI PF13630.6 NODE_47035_length_409_cov_50.951872_g39200_i0forward_frame_2 - 0.085 13.0 4.0 0.15 12.2 4.0 1.4 1 0 0 1 1 1 0 SdpI/YhfL protein family RCC1_2 PF13540.6 NODE_47034_length_409_cov_62.050802_g39199_i0reverse_frame_2 - 8.8e-10 38.1 0.0 0.17 11.8 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Spidroin_N PF16763.5 NODE_47034_length_409_cov_62.050802_g39199_i0reverse_frame_2 - 0.0053 16.8 0.1 6.9 6.7 0.0 2.9 1 1 2 3 3 3 3 Major ampullate spidroin 1, spider silk protein 1, N-term UL97 PF06734.12 NODE_47034_length_409_cov_62.050802_g39199_i0reverse_frame_2 - 0.18 11.7 0.0 2 8.3 0.0 2.3 1 1 2 3 3 3 0 UL97 PKD PF00801.20 NODE_47034_length_409_cov_62.050802_g39199_i0reverse_frame_2 - 0.26 11.2 5.1 15 5.6 0.1 3.1 2 1 1 3 3 3 0 PKD domain HCV_NS5a PF01506.19 NODE_47033_length_409_cov_62.566845_g39198_i0forward_frame_2 - 0.058 13.3 1.0 0.15 12.0 1.0 1.7 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a protein membrane anchor SF3A3 PF16837.5 NODE_47030_length_409_cov_66.604278_g39196_i0forward_frame_2 - 0.036 14.6 2.3 0.068 13.7 2.3 1.5 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 Bac_export_2 PF01312.19 NODE_47029_length_409_cov_67.262032_g39195_i0forward_frame_2 - 6.1 6.0 5.6 6.7 5.8 5.6 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family HATPase_c PF02518.26 NODE_47021_length_409_cov_137.764706_g39187_i0reverse_frame_2 - 3.1e-07 30.9 0.1 4.7e-07 30.3 0.1 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RCC1 PF00415.18 NODE_47012_length_409_cov_179.104278_g39178_i0forward_frame_3 - 0.001 19.6 0.1 0.0017 18.9 0.1 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_47012_length_409_cov_179.104278_g39178_i0forward_frame_3 - 0.0048 16.7 0.0 0.0094 15.7 0.0 1.4 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat DUF959 PF06121.14 NODE_47009_length_409_cov_275.633690_g39175_i0reverse_frame_3 - 0.14 12.4 0.0 0.29 11.3 0.0 1.5 2 0 0 2 2 2 0 Domain of Unknown Function (DUF959) Ribonuc_L-PSP PF01042.21 NODE_47009_length_409_cov_275.633690_g39175_i0forward_frame_3 - 4.3e-09 36.4 0.0 5.1e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP BRCT PF00533.26 NODE_46997_length_410_cov_1.589333_g39165_i0reverse_frame_3 - 0.0059 17.0 0.2 0.016 15.6 0.1 1.8 1 1 1 2 2 2 1 BRCA1 C Terminus (BRCT) domain zf-C3HC4_2 PF13923.6 NODE_46994_length_410_cov_2.037333_g39162_i0reverse_frame_2 - 3.6e-07 29.9 12.1 7.4e-07 28.9 12.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_46994_length_410_cov_2.037333_g39162_i0reverse_frame_2 - 5.9e-05 23.3 12.3 5.9e-05 23.3 12.3 1.7 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_46994_length_410_cov_2.037333_g39162_i0reverse_frame_2 - 0.0018 18.1 13.3 0.0018 18.1 13.3 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_46994_length_410_cov_2.037333_g39162_i0reverse_frame_2 - 0.028 14.4 11.2 0.054 13.5 11.2 1.5 1 0 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_4 PF15227.6 NODE_46994_length_410_cov_2.037333_g39162_i0reverse_frame_2 - 0.047 13.9 11.1 0.047 13.9 11.1 1.9 3 0 0 3 3 3 0 zinc finger of C3HC4-type, RING zf-RING_6 PF14835.6 NODE_46994_length_410_cov_2.037333_g39162_i0reverse_frame_2 - 0.099 12.5 9.7 0.053 13.4 5.0 2.2 1 1 0 2 2 2 0 zf-RING of BARD1-type protein zf-C3HC4_3 PF13920.6 NODE_46994_length_410_cov_2.037333_g39162_i0reverse_frame_2 - 0.25 11.2 10.7 0.49 10.3 10.7 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_46994_length_410_cov_2.037333_g39162_i0reverse_frame_2 - 2.1 8.7 15.4 2.9 8.3 9.7 2.6 2 1 0 2 2 2 0 RING-H2 zinc finger domain IBR PF01485.21 NODE_46994_length_410_cov_2.037333_g39162_i0reverse_frame_2 - 6.3 7.1 18.9 1.5 9.1 10.8 2.6 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain Na_H_Exchanger PF00999.21 NODE_46991_length_410_cov_2.352000_g39159_i0reverse_frame_2 - 3.9e-12 45.7 3.2 4.5e-12 45.5 3.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family RCC1 PF00415.18 NODE_46990_length_410_cov_2.576000_g39158_i0reverse_frame_2 - 1.1e-15 58.0 0.6 1.4e-10 41.6 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_46990_length_410_cov_2.576000_g39158_i0reverse_frame_2 - 5.1e-09 35.7 0.1 5.1e-09 35.7 0.1 2.0 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat TTL PF03133.15 NODE_46989_length_410_cov_2.789333_g39157_i0reverse_frame_3 - 8.9e-08 31.6 0.0 1.1e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Kinesin PF00225.23 NODE_46987_length_410_cov_3.200000_g39155_i0forward_frame_3 - 1.6e-38 132.5 0.1 2e-38 132.1 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_46987_length_410_cov_3.200000_g39155_i0forward_frame_3 - 5.7e-24 84.8 0.0 7.4e-24 84.4 0.0 1.1 1 0 0 1 1 1 1 Microtubule binding Bac_DnaA PF00308.18 NODE_46987_length_410_cov_3.200000_g39155_i0forward_frame_3 - 0.052 13.4 0.0 0.058 13.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein Ribosomal_L35p PF01632.19 NODE_46983_length_410_cov_3.861333_g39151_i0forward_frame_3 - 1.6e-19 70.1 13.2 2.2e-19 69.7 13.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L35 IF3_C PF00707.22 NODE_46983_length_410_cov_3.861333_g39151_i0forward_frame_3 - 1.6e-13 50.4 0.3 1.6e-13 50.4 0.3 1.6 2 0 0 2 2 2 1 Translation initiation factor IF-3, C-terminal domain CSRNP_N PF16019.5 NODE_46980_length_410_cov_6.122667_g39148_i0reverse_frame_3 - 0.018 15.0 0.2 0.026 14.5 0.2 1.2 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus IBB PF01749.20 NODE_46980_length_410_cov_6.122667_g39148_i0reverse_frame_2 - 0.056 13.9 2.2 0.094 13.2 2.2 1.5 1 0 0 1 1 1 0 Importin beta binding domain Vir_act_alpha_C PF10400.9 NODE_46980_length_410_cov_6.122667_g39148_i0reverse_frame_2 - 0.056 14.1 5.2 0.49 11.1 0.8 2.2 1 1 1 2 2 2 0 Virulence activator alpha C-term Pinin_SDK_memA PF04696.13 NODE_46980_length_410_cov_6.122667_g39148_i0reverse_frame_2 - 0.2 11.7 11.0 0.43 10.6 11.0 1.6 1 1 0 1 1 1 0 pinin/SDK/memA/ protein conserved region DUF4131 PF13567.6 NODE_46979_length_410_cov_12.194667_g39147_i0reverse_frame_3 - 6.2 6.4 14.0 10 5.8 14.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF21 PF01595.20 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_3 - 0.073 12.8 0.8 0.092 12.4 0.8 1.2 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain Shisa PF13908.6 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.0017 18.6 2.3 0.0021 18.3 2.3 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF2371 PF10177.9 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.0076 16.4 0.9 0.012 15.8 0.9 1.5 1 1 0 1 1 1 1 Uncharacterised conserved protein (DUF2371) Apt1 PF10351.9 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.011 14.6 1.6 0.011 14.7 1.6 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain SID-1_RNA_chan PF13965.6 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.013 13.9 0.5 0.014 13.9 0.5 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF4834 PF16118.5 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.015 16.3 0.1 0.02 15.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Ctr PF04145.15 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.015 15.9 0.6 0.018 15.6 0.6 1.1 1 0 0 1 1 1 0 Ctr copper transporter family FAM176 PF14851.6 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.03 14.0 0.3 0.037 13.7 0.3 1.2 1 0 0 1 1 1 0 FAM176 family Trp_oprn_chp PF09534.10 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.033 14.0 0.3 0.043 13.6 0.3 1.3 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Eapp_C PF10238.9 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.053 13.6 0.2 0.068 13.2 0.2 1.1 1 0 0 1 1 1 0 E2F-associated phosphoprotein RSB_motif PF16294.5 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.096 13.0 6.7 0.12 12.7 6.7 1.2 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif Baculo_11_kDa PF06143.11 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.21 11.2 2.5 0.32 10.6 2.5 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family NPR3 PF03666.13 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.22 10.3 3.3 0.24 10.2 3.3 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 HemY_N PF07219.13 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.27 11.4 1.0 0.47 10.7 1.0 1.4 1 0 0 1 1 1 0 HemY protein N-terminus AF-4 PF05110.13 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.45 8.6 16.4 0.54 8.3 16.4 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein Corona_nucleoca PF00937.18 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.53 9.3 18.0 0.72 8.8 18.0 1.2 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Lin-8 PF03353.15 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.59 9.7 3.7 0.75 9.3 3.7 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist EphA2_TM PF14575.6 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 1.2 10.0 7.0 2.9 8.8 7.0 1.8 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain eIF-5_eIF-2B PF01873.17 NODE_46975_length_410_cov_58.994667_g39143_i0reverse_frame_3 - 0.45 10.4 4.0 0.52 10.2 0.8 2.1 1 1 1 2 2 2 0 Domain found in IF2B/IF5 VEGFR-2_TMD PF17988.1 NODE_46960_length_410_cov_87.010667_g39129_i0forward_frame_3 - 0.35 10.4 3.0 0.85 9.1 3.0 1.6 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain PTEN_C2 PF10409.9 NODE_46959_length_410_cov_88.634667_g39128_i0reverse_frame_2 - 0.00015 21.5 0.0 0.00021 21.0 0.0 1.3 1 1 0 1 1 1 1 C2 domain of PTEN tumour-suppressor protein PH PF00169.29 NODE_46956_length_410_cov_99.032000_g39125_i0forward_frame_3 - 0.032 14.7 0.0 0.051 14.1 0.0 1.3 1 0 0 1 1 1 0 PH domain DUF630 PF04783.12 NODE_46954_length_410_cov_117.512000_g39057_i1reverse_frame_3 - 0.057 13.6 0.3 0.092 12.9 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF630) MyTH4 PF00784.17 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_3 - 0.0025 18.3 2.5 7.6 7.1 0.1 3.0 1 1 2 3 3 3 3 MyTH4 domain UPF0444 PF15475.6 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_2 - 0.087 13.1 2.1 0.14 12.5 0.2 2.1 1 1 1 2 2 2 0 Transmembrane protein C12orf23, UPF0444 DUF2840 PF11000.8 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_2 - 0.15 11.8 0.0 6.6 6.5 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2840) Tuberculin PF12198.8 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_2 - 0.28 11.3 3.1 8.4 6.6 0.1 3.1 3 0 0 3 3 3 0 Theoretical tuberculin protein RCC1_2 PF13540.6 NODE_46950_length_410_cov_164.816000_g39121_i0forward_frame_2 - 8.5e-07 28.6 3.7 0.053 13.3 0.1 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_46950_length_410_cov_164.816000_g39121_i0forward_frame_2 - 0.0099 16.0 0.1 27 4.8 0.0 3.0 2 1 1 3 3 3 3 Uncharacterised ACR, YagE family COG1723 Arteri_Gl PF00951.18 NODE_46941_length_410_cov_318.744000_g39112_i0reverse_frame_2 - 0.12 12.2 3.2 0.15 11.9 3.2 1.2 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein Ras PF00071.22 NODE_46941_length_410_cov_318.744000_g39112_i0forward_frame_3 - 3.5e-11 43.0 0.1 4.3e-11 42.7 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_46941_length_410_cov_318.744000_g39112_i0forward_frame_3 - 9.1e-05 22.7 0.1 0.00013 22.1 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase zf-Tim10_DDP PF02953.15 NODE_46936_length_410_cov_1440.661333_g39108_i0reverse_frame_3 - 0.00013 21.5 0.3 0.00028 20.4 0.3 1.5 1 0 0 1 1 1 1 Tim10/DDP family zinc finger zf-met PF12874.7 NODE_46933_length_410_cov_14537.285333_g39106_i0forward_frame_2 - 0.41 11.1 2.1 13 6.3 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type DUF4169 PF13770.6 NODE_46932_length_411_cov_1.271277_g39105_i0forward_frame_3 - 0.26 11.6 0.4 0.26 11.6 0.4 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4169) DUF4129 PF13559.6 NODE_46929_length_411_cov_1.686170_g39102_i0reverse_frame_3 - 0.14 12.5 0.3 0.14 12.5 0.3 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4129) PAZ_siRNAbind PF12212.8 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.006 16.4 0.1 0.017 15.0 0.1 1.8 1 1 1 2 2 2 1 PAZ domain His_Phos_2 PF00328.22 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.014 14.8 0.3 0.015 14.7 0.3 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) Baculo_PEP_C PF04513.12 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.039 14.0 1.1 0.051 13.6 0.7 1.3 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3600 PF12207.8 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.044 13.7 0.3 0.067 13.1 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3600) Ribonuc_2-5A PF06479.12 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.047 13.9 0.2 0.076 13.2 0.2 1.3 1 0 0 1 1 1 0 Ribonuclease 2-5A WXG100 PF06013.12 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.087 13.1 2.5 3.2 8.0 0.0 2.8 3 0 0 3 3 3 0 Proteins of 100 residues with WXG LPP PF04728.13 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.099 13.0 2.2 1.5 9.3 0.1 2.8 3 0 0 3 3 3 0 Lipoprotein leucine-zipper Sgf11_N PF18519.1 NODE_46927_length_411_cov_2.069149_g39100_i0forward_frame_3 - 0.47 10.0 4.8 0.19 11.3 1.3 2.1 2 0 0 2 2 2 0 SAGA-associated factor 11 N-terminal domain COX6C PF02937.15 NODE_46924_length_411_cov_2.154255_g39097_i0reverse_frame_2 - 0.15 12.2 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc Herpes_UL49_5 PF05702.11 NODE_46920_length_411_cov_2.382979_g39093_i0reverse_frame_3 - 0.026 14.6 1.0 0.047 13.8 1.0 1.4 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein GAPES2 PF17156.4 NODE_46920_length_411_cov_2.382979_g39093_i0forward_frame_3 - 1.5e-40 139.2 0.8 1.8e-40 138.9 0.8 1.1 1 0 0 1 1 1 1 Gammaproteobacterial periplasmic sensor domain FtsL PF04999.13 NODE_46920_length_411_cov_2.382979_g39093_i0forward_frame_3 - 0.24 11.4 1.2 0.43 10.6 1.1 1.6 1 1 0 1 1 1 0 Cell division protein FtsL EAL PF00563.20 NODE_46920_length_411_cov_2.382979_g39093_i0forward_frame_2 - 0.12 11.9 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 EAL domain Leu_zip PF15294.6 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.0058 16.2 1.7 0.0065 16.0 1.7 1.1 1 0 0 1 1 1 1 Leucine zipper PRKG1_interact PF15898.5 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.0066 17.3 1.9 0.012 16.5 1.9 1.5 1 0 0 1 1 1 1 cGMP-dependent protein kinase interacting domain RIG-I_C PF18119.1 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.007 16.4 1.7 0.0096 15.9 1.7 1.3 1 0 0 1 1 1 1 RIG-I receptor C-terminal domain Prominin PF05478.11 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.023 12.7 2.5 0.025 12.6 2.5 1.0 1 0 0 1 1 1 0 Prominin DUF1864 PF08933.11 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.062 12.0 0.9 0.069 11.9 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1864) Nsp1_C PF05064.13 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.086 12.7 4.7 0.11 12.3 4.7 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region Iwr1 PF08574.10 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.1 13.6 3.4 0.16 13.0 3.4 1.3 1 0 0 1 1 1 0 Transcription factor Iwr1 Sugar_tr PF00083.24 NODE_46913_length_411_cov_2.914894_g39086_i0reverse_frame_3 - 0.061 12.2 3.4 0.067 12.0 3.4 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter ASXH PF13919.6 NODE_46912_length_411_cov_2.954787_g39085_i0forward_frame_2 - 0.039 14.0 0.0 0.049 13.6 0.0 1.1 1 0 0 1 1 1 0 Asx homology domain TPP_enzyme_M PF00205.22 NODE_46911_length_411_cov_3.117021_g39084_i0forward_frame_2 - 4.4e-35 120.4 0.1 4.8e-35 120.3 0.1 1.0 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 NODE_46911_length_411_cov_3.117021_g39084_i0forward_frame_2 - 0.074 12.8 0.0 0.089 12.6 0.0 1.2 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit DUF498 PF04430.14 NODE_46911_length_411_cov_3.117021_g39084_i0forward_frame_2 - 0.097 12.7 0.0 0.19 11.8 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) DUF4231 PF14015.6 NODE_46906_length_411_cov_17.055851_g39079_i0reverse_frame_3 - 0.19 12.2 0.9 5.6 7.5 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) FKBP_C PF00254.28 NODE_46903_length_411_cov_57.747340_g39076_i0forward_frame_3 - 6.8e-27 93.6 0.0 8.9e-27 93.3 0.0 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FAM176 PF14851.6 NODE_46898_length_411_cov_78.587766_g39071_i0forward_frame_2 - 1.4 8.6 5.0 1.3 8.6 4.0 1.4 1 1 0 1 1 1 0 FAM176 family Presenilin PF01080.17 NODE_46898_length_411_cov_78.587766_g39071_i0forward_frame_2 - 4.5 5.9 5.1 4.5 5.9 5.1 1.1 1 0 0 1 1 1 0 Presenilin DUF72 PF01904.18 NODE_46895_length_411_cov_82.609043_g39068_i0reverse_frame_2 - 7.2e-13 49.2 0.4 8.9e-13 48.9 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF72 PknG_TPR PF16918.5 NODE_46895_length_411_cov_82.609043_g39068_i0reverse_frame_2 - 0.075 11.7 0.0 0.086 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks167.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks167.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks167.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks167.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AHJR-like PF18743.1 NODE_46894_length_411_cov_85.026596_g39067_i0reverse_frame_2 - 0.053 13.1 0.0 0.072 12.6 0.0 1.2 1 0 0 1 1 1 0 REase_AHJR-like Trehalose_recp PF06151.13 NODE_46892_length_411_cov_100.901596_g39065_i0forward_frame_2 - 0.0025 16.5 0.8 0.0034 16.0 0.0 1.5 2 0 0 2 2 2 1 Trehalose receptor DUF4365 PF14280.6 NODE_46886_length_411_cov_116.143617_g39059_i0reverse_frame_2 - 0.18 11.7 2.4 0.43 10.5 2.4 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4365) B_solenoid_ydck PF18836.1 NODE_46886_length_411_cov_116.143617_g39059_i0forward_frame_3 - 0.14 12.0 0.5 0.26 11.2 0.5 1.4 1 0 0 1 1 1 0 Beta solenoid repeat from YDCK Viral_NABP PF05515.11 NODE_46881_length_411_cov_128.566489_g39054_i0reverse_frame_2 - 0.00067 19.6 1.4 0.00076 19.4 1.4 1.1 1 0 0 1 1 1 1 Viral nucleic acid binding TRP PF06011.12 NODE_46880_length_411_cov_130.106383_g39053_i0forward_frame_3 - 0.0039 16.0 6.8 0.0039 16.0 6.8 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF4389 PF14333.6 NODE_46880_length_411_cov_130.106383_g39053_i0forward_frame_3 - 0.63 10.0 9.4 0.23 11.4 5.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4389) Rhodanese_C PF12368.8 NODE_46880_length_411_cov_130.106383_g39053_i0forward_frame_2 - 0.51 10.7 6.1 0.32 11.4 0.6 2.2 2 0 0 2 2 2 0 Rhodanase C-terminal SYCP2_SLD PF18584.1 NODE_46877_length_411_cov_138.154255_g39050_i0reverse_frame_2 - 0.061 13.6 1.3 0.092 13.0 1.0 1.4 1 1 0 1 1 1 0 Synaptonemal complex 2 Spt16M-like domain ThiJ_like PF17124.5 NODE_46871_length_411_cov_169.614362_g39044_i0reverse_frame_3 - 0.17 11.6 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 ThiJ/PfpI family-like bZIP_Maf PF03131.17 ORF99904 - 0.33 11.5 10.1 0.09 13.3 6.4 1.9 2 0 0 2 2 2 0 bZIP Maf transcription factor Mem_trans PF03547.18 ORF99904 - 8.4 4.7 6.2 8 4.7 6.2 1.1 1 0 0 1 1 1 0 Membrane transport protein Methyltransf_31 PF13847.6 ORF99756 - 1.5e-07 31.4 0.0 1.7e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF99756 - 2.5e-07 30.4 0.1 3.4e-06 26.7 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase small domain N6_Mtase PF02384.16 ORF99756 - 0.0029 16.9 0.0 0.0032 16.8 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase UPF0020 PF01170.18 ORF99756 - 0.019 14.7 0.0 0.026 14.2 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 SLT_2 PF13406.6 ORF99756 - 0.13 11.5 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Transglycosylase SLT domain Cons_hypoth95 PF03602.15 ORF99756 - 0.14 11.7 0.0 0.28 10.8 0.0 1.4 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Pterin_4a PF01329.19 ORF99048 - 4.1e-13 49.3 0.0 5.5e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase DNA_pack_N PF02500.15 ORF99048 - 0.071 12.9 0.1 0.075 12.9 0.1 1.0 1 0 0 1 1 1 0 Probable DNA packing protein, N-terminus Ion_trans PF00520.31 ORF96990 - 8.7e-07 28.4 1.2 8.7e-07 28.4 1.2 1.4 2 0 0 2 2 2 1 Ion transport protein PKD_channel PF08016.12 ORF96990 - 0.0005 18.9 1.9 0.00075 18.3 1.9 1.2 1 0 0 1 1 1 1 Polycystin cation channel Wyosine_form PF08608.12 ORF9694 - 0.15 12.5 0.2 0.36 11.2 0.0 1.8 2 0 0 2 2 2 0 Wyosine base formation MscL PF01741.18 ORF95358 - 1.4e-45 154.5 3.1 1.5e-45 154.4 3.1 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL UPF0239 PF06783.11 ORF95358 - 0.0081 16.3 0.6 0.029 14.5 0.0 1.9 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0239) OAD_gamma PF04277.13 ORF95358 - 0.0094 16.5 0.4 0.0094 16.5 0.4 1.7 2 0 0 2 2 2 1 Oxaloacetate decarboxylase, gamma chain DUF3487 PF11990.8 ORF95358 - 0.027 14.3 1.7 0.47 10.3 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) Ac110_PIF PF07280.11 ORF95358 - 0.076 12.8 0.1 0.2 11.5 0.1 1.6 1 0 0 1 1 1 0 Per os infectivity factor AC110 Rad60-SLD PF11976.8 ORF94838 - 0.0021 17.8 1.1 2.3 8.1 0.1 3.0 1 1 1 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Myosin_head PF00063.21 ORF94838 - 0.0042 15.4 2.0 0.006 14.9 0.1 1.8 1 1 1 2 2 2 1 Myosin head (motor domain) Trp_halogenase PF04820.14 ORF94838 - 0.0049 15.8 0.1 0.0057 15.6 0.1 1.0 1 0 0 1 1 1 1 Tryptophan halogenase THDPS_N_2 PF14805.6 ORF94838 - 0.025 14.8 0.1 7.4 6.9 0.0 2.6 2 1 0 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal DUF2043 PF09740.9 ORF94838 - 0.079 13.7 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2043) PDZ_6 PF17820.1 ORF94343 - 3e-06 27.0 0.1 0.061 13.2 0.0 2.5 2 1 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF94343 - 0.00022 21.5 0.2 1.2 9.5 0.1 2.9 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF94343 - 0.007 16.7 0.0 1.4 9.2 0.0 2.4 2 1 0 2 2 2 2 PDZ domain Peptidase_M1_N PF17900.1 ORF93938 - 8.4e-17 61.9 0.4 9.8e-17 61.7 0.4 1.1 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain EF-hand_1 PF00036.32 ORF92841 - 4.2e-19 66.6 9.8 2.5e-06 26.6 0.1 3.6 3 1 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF92841 - 2.6e-18 66.2 2.0 5.2e-13 49.2 0.2 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF92841 - 3.9e-17 60.6 7.0 1.2e-05 24.8 0.1 3.5 3 0 0 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 ORF92841 - 3.1e-14 51.7 8.3 6e-05 22.3 0.0 3.6 3 1 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF92841 - 1.1e-13 50.8 3.5 3e-10 39.8 0.2 2.4 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF92841 - 8.9e-06 26.0 0.5 0.00034 20.9 0.1 2.1 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EFhand_Ca_insen PF08726.10 ORF92841 - 6.1e-05 23.0 0.0 0.00011 22.3 0.0 1.4 1 0 0 1 1 1 1 Ca2+ insensitive EF hand Caleosin PF05042.13 ORF92841 - 0.0019 18.2 0.9 0.72 9.8 0.2 2.7 1 1 1 3 3 3 2 Caleosin related protein EF-hand_4 PF12763.7 ORF92841 - 0.002 18.0 1.2 0.0025 17.7 0.5 1.4 1 1 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand DUF496 PF04363.12 ORF92841 - 0.045 13.8 1.1 0.073 13.1 1.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF496) Histone PF00125.24 ORF92040 - 1.8e-53 180.4 3.2 2e-53 180.2 3.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF92040 - 1.2e-05 25.9 1.9 1.5e-05 25.6 1.9 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF92040 - 0.00014 22.1 0.0 0.00023 21.5 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF92040 - 0.0003 20.9 0.1 0.00057 20.0 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF92040 - 0.0018 18.5 0.1 0.0042 17.3 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF92040 - 0.05 13.7 0.0 0.07 13.2 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit GSH_synth_ATP PF03917.17 ORF90700 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF90700 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF90700 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF90700 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family FIST_C PF10442.9 ORF89936 - 0.075 13.0 0.2 0.098 12.6 0.2 1.2 1 0 0 1 1 1 0 FIST C domain Jnk-SapK_ap_N PF09744.9 ORF89936 - 0.17 12.1 6.8 0.25 11.6 6.8 1.3 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 H-kinase_dim PF02895.14 ORF89936 - 0.23 11.9 2.8 13 6.2 0.2 2.3 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain COG5 PF10392.9 ORF89936 - 0.24 11.6 6.0 0.69 10.1 5.1 2.0 1 1 1 2 2 2 0 Golgi transport complex subunit 5 ABC_tran_Xtn PF12848.7 ORF89936 - 0.26 11.4 3.3 0.58 10.2 0.4 2.3 1 1 1 2 2 2 0 ABC transporter Spc7 PF08317.11 ORF89936 - 0.62 8.9 7.4 0.82 8.5 7.4 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein CCDC-167 PF15188.6 ORF89936 - 2.2 8.7 7.8 6.1 7.3 3.2 2.7 2 1 1 3 3 3 0 Coiled-coil domain-containing protein 167 Disaggr_repeat PF06848.11 ORF89934 - 0.063 13.0 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 Disaggregatase related repeat DivIC PF04977.15 ORF89844 - 0.015 15.0 4.0 0.38 10.5 0.1 2.4 2 1 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF89844 - 0.028 14.6 5.6 0.063 13.5 1.0 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Imm51 PF15595.6 ORF89844 - 0.035 14.1 2.4 1.9 8.4 0.4 2.2 2 0 0 2 2 2 0 Immunity protein 51 ABC_tran_CTD PF16326.5 ORF89844 - 0.052 13.8 8.1 0.07 13.4 1.1 3.0 3 0 0 3 3 3 0 ABC transporter C-terminal domain KELK PF15796.5 ORF89844 - 0.075 13.5 0.6 0.075 13.5 0.6 2.3 2 1 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase V-ATPase_G_2 PF16999.5 ORF89844 - 0.13 12.7 1.2 1.6 9.2 0.0 2.1 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF1943 PF09172.11 ORF89844 - 0.18 11.0 5.1 0.19 10.9 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) FeoB_Cyto PF17910.1 ORF89844 - 1.3 9.6 6.1 0.59 10.7 0.5 2.3 2 1 0 2 2 2 0 FeoB cytosolic helical domain EF-hand_14 PF17959.1 ORF89294 - 0.085 13.2 1.0 0.25 11.7 0.0 2.1 1 1 1 2 2 2 0 EF-hand domain C2 PF00168.30 ORF87917 - 0.00045 20.5 0.0 0.00063 20.0 0.0 1.2 1 0 0 1 1 1 1 C2 domain KIAA1430 PF13879.6 ORF87690 - 0.00021 22.0 3.9 0.00039 21.1 3.9 1.5 1 1 0 1 1 1 1 KIAA1430 homologue Peptidase_M29 PF02073.15 ORF87690 - 0.1 11.3 0.2 0.12 11.2 0.2 1.1 1 0 0 1 1 1 0 Thermophilic metalloprotease (M29) DivIC PF04977.15 ORF873 - 0.015 15.0 4.0 0.38 10.5 0.1 2.4 2 1 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF873 - 0.028 14.6 5.6 0.063 13.5 1.0 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Imm51 PF15595.6 ORF873 - 0.035 14.1 2.4 1.9 8.4 0.4 2.2 2 0 0 2 2 2 0 Immunity protein 51 ABC_tran_CTD PF16326.5 ORF873 - 0.052 13.8 8.1 0.07 13.4 1.1 3.0 3 0 0 3 3 3 0 ABC transporter C-terminal domain KELK PF15796.5 ORF873 - 0.075 13.5 0.6 0.075 13.5 0.6 2.3 2 1 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase V-ATPase_G_2 PF16999.5 ORF873 - 0.13 12.7 1.2 1.6 9.2 0.0 2.1 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF1943 PF09172.11 ORF873 - 0.18 11.0 5.1 0.19 10.9 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) FeoB_Cyto PF17910.1 ORF873 - 1.3 9.6 6.1 0.59 10.7 0.5 2.3 2 1 0 2 2 2 0 FeoB cytosolic helical domain Ion_trans PF00520.31 ORF86584 - 8.7e-07 28.4 1.2 8.7e-07 28.4 1.2 1.4 2 0 0 2 2 2 1 Ion transport protein PKD_channel PF08016.12 ORF86584 - 0.0005 18.9 1.9 0.00075 18.3 1.9 1.2 1 0 0 1 1 1 1 Polycystin cation channel PhyH PF05721.13 ORF86423 - 0.00023 21.5 0.0 0.00031 21.1 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Pkinase PF00069.25 ORF85085 - 7e-44 150.2 0.8 7.5e-44 150.1 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85085 - 1e-21 77.4 0.1 1.2e-21 77.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF85085 - 3.4e-06 26.6 0.0 3.7e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF85085 - 0.00027 19.9 0.0 0.0003 19.7 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF85085 - 0.003 17.5 0.0 0.0053 16.7 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Ribosomal_L1 PF00687.21 ORF85085 - 0.014 15.1 0.0 0.017 14.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L1p/L10e family YrbL-PhoP_reg PF10707.9 ORF85085 - 0.018 14.6 0.2 0.024 14.2 0.2 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Kinase-like PF14531.6 ORF85085 - 0.02 14.2 0.0 0.02 14.2 0.0 1.1 1 0 0 1 1 1 0 Kinase-like DUF1298 PF06974.13 ORF84801 - 3.6e-13 49.7 0.1 3.9e-13 49.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) EamA PF00892.20 ORF84729 - 0.0001 22.5 7.8 0.00014 22.1 7.8 1.3 1 1 0 1 1 1 1 EamA-like transporter family Phage_holin_2_4 PF16082.5 ORF84729 - 0.11 12.3 0.0 17 5.2 0.0 2.2 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Gram_pos_anchor PF00746.21 ORF84729 - 0.15 12.0 5.7 0.36 10.8 0.2 2.2 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Pkinase PF00069.25 ORF84480 - 2.4e-38 132.0 0.7 2.7e-38 131.9 0.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF84480 - 2.1e-20 73.1 0.2 2.4e-20 72.9 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF84480 - 8.3e-06 25.3 0.0 1e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF84480 - 9.9e-05 21.4 0.4 0.00012 21.2 0.4 1.1 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF84480 - 0.022 14.7 0.0 0.15 12.0 0.0 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family Asp-B-Hydro_N PF05279.11 ORF82973 - 3.7 7.6 15.8 4.4 7.3 15.8 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Ldh_2 PF02615.14 ORF8295 - 2e-18 66.7 0.0 2.2e-18 66.5 0.0 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase KIAA1430 PF13879.6 ORF82370 - 0.0019 19.0 10.4 0.0024 18.6 10.4 1.2 1 0 0 1 1 1 1 KIAA1430 homologue Heme_oxygenase PF01126.20 ORF82370 - 0.023 14.5 0.4 0.034 13.9 0.4 1.2 1 0 0 1 1 1 0 Heme oxygenase TFIIB_C_1 PF18542.1 ORF79345 - 0.029 14.4 0.1 0.044 13.8 0.1 1.4 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 TPR_17 PF13431.6 ORF78057 - 0.00048 20.3 0.1 0.0054 17.0 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF78057 - 0.0058 16.3 0.3 0.026 14.2 0.0 2.0 2 0 0 2 2 2 1 TPR repeat DUF4855 PF16147.5 ORF78057 - 0.014 14.5 0.0 0.017 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4855) Paramyxo_PNT PF14320.6 ORF78057 - 0.036 13.2 0.0 0.044 13.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoprotein P region PNT disordered TPR_1 PF00515.28 ORF78057 - 1.5 8.8 6.5 19 5.3 0.0 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat ECM1 PF05782.11 ORF77558 - 0.036 13.0 10.6 0.04 12.9 10.6 1.1 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) FAA_hydro_N_2 PF18288.1 ORF77558 - 1.3 9.5 5.1 6.9 7.2 0.3 3.0 2 1 1 3 3 3 0 Fumarylacetoacetase N-terminal domain 2 DUF4524 PF15025.6 ORF77558 - 6.1 6.6 9.8 0.17 11.6 3.7 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4524) RAMA PF18755.1 ORF77106 - 0.12 12.9 0.0 0.15 12.5 0.0 1.3 1 1 0 1 1 1 0 Restriction Enzyme Adenine Methylase Associated Ribosomal_L16 PF00252.18 ORF74839 - 3.7e-47 159.7 0.7 4.1e-47 159.5 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DUF982 PF06169.12 ORF74839 - 0.28 11.2 1.7 9 6.4 0.2 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF982) SHIPPO-rpt PF07004.12 ORF7452 - 1.4e-12 47.9 26.5 0.00017 22.4 0.3 4.3 4 0 0 4 4 4 4 Sperm-tail PG-rich repeat ECR1_N PF14382.6 ORF7452 - 0.029 14.2 0.0 6.2 6.7 0.0 3.2 3 0 0 3 3 3 0 Exosome complex exonuclease RRP4 N-terminal region ERGIC_N PF13850.6 ORF74087 - 0.0025 18.1 1.0 0.0045 17.3 1.0 1.5 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) EII-GUT PF03608.13 ORF74087 - 0.017 15.0 0.2 0.024 14.6 0.2 1.2 1 0 0 1 1 1 0 PTS system enzyme II sorbitol-specific factor GSH_synth_ATP PF03917.17 ORF74036 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF74036 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF74036 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF74036 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family Streptin-Immun PF11083.8 ORF72035 - 0.002 18.5 2.7 0.19 12.1 0.2 2.4 2 0 0 2 2 2 2 Lantibiotic streptin immunity protein YabA PF06156.13 ORF72035 - 0.0041 17.7 0.5 0.0041 17.7 0.5 2.0 1 1 1 2 2 2 1 Initiation control protein YabA RmuC PF02646.16 ORF72035 - 0.04 13.1 3.7 0.1 11.7 3.7 1.8 1 1 0 1 1 1 0 RmuC family TssO PF17561.2 ORF72035 - 0.054 13.6 6.7 0.076 13.1 6.7 1.3 1 0 0 1 1 1 0 Type VI secretion system, TssO DUF4200 PF13863.6 ORF72035 - 0.13 12.7 10.4 0.18 12.2 10.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) NPV_P10 PF05531.12 ORF72035 - 0.14 12.6 2.4 0.34 11.4 0.4 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein CLZ PF16526.5 ORF72035 - 0.16 12.4 0.5 0.16 12.4 0.5 2.0 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DivIC PF04977.15 ORF72035 - 9.9 6.0 8.9 1.4 8.8 0.3 2.9 1 1 1 3 3 3 0 Septum formation initiator Tom22 PF04281.13 ORF70242 - 0.022 14.5 1.2 0.029 14.1 1.2 1.2 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 Syd PF07348.12 ORF70126 - 0.13 11.9 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 Syd protein (SUKH-2) Histone PF00125.24 ORF70010 - 1.8e-53 180.4 3.2 2e-53 180.2 3.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF70010 - 1.2e-05 25.9 1.9 1.5e-05 25.6 1.9 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF70010 - 0.00014 22.1 0.0 0.00023 21.5 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF70010 - 0.0003 20.9 0.1 0.00057 20.0 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF70010 - 0.0018 18.5 0.1 0.0042 17.3 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF70010 - 0.05 13.7 0.0 0.07 13.2 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit FAM76 PF16046.5 ORF6999 - 8.7 5.6 8.9 11 5.3 8.9 1.1 1 0 0 1 1 1 0 FAM76 protein LapA_dom PF06305.11 ORF6955 - 0.0035 17.1 0.2 0.0053 16.5 0.2 1.2 1 0 0 1 1 1 1 Lipopolysaccharide assembly protein A domain Saf_2TM PF18303.1 ORF6955 - 0.033 13.8 0.1 0.045 13.3 0.1 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain TMEM154 PF15102.6 ORF6955 - 0.085 12.8 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF4381 PF14316.6 ORF6955 - 0.23 11.7 0.2 0.38 11.0 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4381) Frataxin_Cyay PF01491.16 ORF68727 - 3.5e-30 104.3 0.1 4.3e-30 104.0 0.1 1.1 1 0 0 1 1 1 1 Frataxin-like domain PDZ_6 PF17820.1 ORF68201 - 4.6e-06 26.4 0.1 0.098 12.5 0.0 2.5 2 1 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF68201 - 0.00085 19.6 0.1 1.7 9.0 0.0 2.9 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF68201 - 0.003 17.8 0.0 1.4 9.2 0.0 2.4 2 1 0 2 2 2 2 PDZ domain GSH_synth_ATP PF03917.17 ORF68033 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF68033 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF68033 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF68033 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family GSH_synth_ATP PF03917.17 ORF67005 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF67005 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF67005 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF67005 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family LpoB PF13036.6 ORF65969 - 0.011 15.7 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB LpoB PF13036.6 ORF65897 - 0.011 15.7 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB GSH_synth_ATP PF03917.17 ORF65715 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF65715 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF65715 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF65715 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family BAR_3_WASP_bdg PF10456.9 ORF65330 - 0.041 13.4 0.1 0.1 12.0 0.1 1.6 1 1 0 2 2 2 0 WASP-binding domain of Sorting nexin protein GSH_synth_ATP PF03917.17 ORF6465 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF6465 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF6465 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF6465 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family p25-alpha PF05517.12 ORF64444 - 0.0011 19.1 0.4 0.0013 18.9 0.4 1.1 1 0 0 1 1 1 1 p25-alpha Peptidase_M1_N PF17900.1 ORF61828 - 8.4e-17 61.9 0.4 9.8e-17 61.7 0.4 1.1 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Lactamase_B_2 PF12706.7 ORF61248 - 4.8e-09 36.0 0.0 6.2e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 ORF61248 - 2.5e-05 24.2 0.0 3.4e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 ORF61248 - 0.00033 20.7 0.1 0.0004 20.5 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Epsilon_antitox PF08998.11 ORF61036 - 0.028 14.7 0.3 0.041 14.2 0.3 1.4 1 1 0 1 1 1 0 Bacterial epsilon antitoxin 7TM-7TMR_HD PF07698.11 ORF58040 - 0.22 11.3 8.8 0.25 11.1 2.2 2.0 1 1 1 2 2 2 0 7TM receptor with intracellular HD hydrolase AATF-Che1 PF13339.6 ORF57648 - 0.24 12.1 5.6 1.2 9.8 5.6 1.9 1 1 0 1 1 1 0 Apoptosis antagonizing transcription factor NTS PF15447.6 ORF57648 - 0.25 11.9 0.1 0.25 11.9 0.1 2.6 3 0 0 3 3 3 0 N-terminal segments of PfEMP1 LMBR1 PF04791.16 ORF57648 - 6.3 5.6 8.4 7.9 5.3 8.4 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein TB2_DP1_HVA22 PF03134.19 ORF57550 - 1.1e-16 60.5 3.7 1.6e-16 60.0 3.7 1.2 1 0 0 1 1 1 1 TB2/DP1, HVA22 family Asp-B-Hydro_N PF05279.11 ORF55710 - 3.7 7.6 15.8 4.4 7.3 15.8 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Exostosin PF03016.15 ORF55569 - 9.7e-09 34.9 0.0 1.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Exostosin family Spo0A_C PF08769.11 ORF55569 - 0.038 14.1 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Sporulation initiation factor Spo0A C terminal R-HINP1I PF11463.8 ORF55569 - 0.06 12.8 0.0 0.07 12.6 0.0 1.1 1 0 0 1 1 1 0 R.HinP1I restriction endonuclease PHTB1_N PF14727.6 ORF54507 - 0.024 14.0 0.1 0.026 13.9 0.1 1.1 1 0 0 1 1 1 0 PTHB1 N-terminus BBS2_Mid PF14783.6 ORF54507 - 0.046 13.8 0.1 0.067 13.2 0.1 1.3 1 1 0 1 1 1 0 Ciliary BBSome complex subunit 2, middle region CpeT PF06206.11 ORF5435 - 0.12 12.3 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 CpeT/CpcT family (DUF1001) Arrestin_N PF00339.29 ORF53213 - 3.6e-08 33.6 0.0 4.4e-08 33.3 0.0 1.0 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain GSH_synth_ATP PF03917.17 ORF5296 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF5296 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF5296 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF5296 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family Methylase_S PF01420.19 ORF5254 - 0.024 14.8 2.3 0.031 14.5 2.3 1.1 1 0 0 1 1 1 0 Type I restriction modification DNA specificity domain Erythrovirus_X PF06795.11 ORF5254 - 0.27 11.6 2.6 0.38 11.1 0.3 2.1 2 0 0 2 2 2 0 Erythrovirus X protein 4HBT PF03061.22 ORF52455 - 8.6e-16 58.1 0.2 1.4e-15 57.4 0.2 1.3 1 0 0 1 1 1 1 Thioesterase superfamily STAT_int PF02865.17 ORF50985 - 0.057 13.9 0.0 0.078 13.4 0.0 1.2 1 0 0 1 1 1 0 STAT protein, protein interaction domain cNMP_binding PF00027.29 ORF49521 - 2.8e-12 46.5 0.0 3.5e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain PhyH PF05721.13 ORF4936 - 5.5e-07 30.1 0.0 9.4e-07 29.3 0.0 1.4 1 1 1 2 2 2 1 Phytanoyl-CoA dioxygenase (PhyH) mTERF PF02536.14 ORF4869 - 1.2e-08 34.2 1.1 1.5e-08 34.0 1.1 1.1 1 0 0 1 1 1 1 mTERF DUF1563 PF07599.11 ORF4869 - 0.99 9.6 5.3 1.1 9.4 0.4 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1563) PseudoU_synth_2 PF00849.22 ORF48297 - 5.8e-05 23.2 0.0 7.3e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase Histone PF00125.24 ORF4824 - 1.8e-53 180.4 3.2 2e-53 180.2 3.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF4824 - 1.2e-05 25.9 1.9 1.5e-05 25.6 1.9 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF4824 - 0.00014 22.1 0.0 0.00023 21.5 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF4824 - 0.0003 20.9 0.1 0.00057 20.0 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF4824 - 0.0018 18.5 0.1 0.0042 17.3 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF4824 - 0.05 13.7 0.0 0.07 13.2 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit STAT_int PF02865.17 ORF48194 - 0.057 13.9 0.0 0.078 13.4 0.0 1.2 1 0 0 1 1 1 0 STAT protein, protein interaction domain Asp-B-Hydro_N PF05279.11 ORF48020 - 3.7 7.6 15.8 4.4 7.3 15.8 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region GSH_synth_ATP PF03917.17 ORF47519 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF47519 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF47519 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF47519 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family TB2_DP1_HVA22 PF03134.19 ORF47214 - 1.1e-16 60.5 3.7 1.6e-16 60.0 3.7 1.2 1 0 0 1 1 1 1 TB2/DP1, HVA22 family zf-LITAF-like PF10601.9 ORF44419 - 0.00016 21.9 0.8 0.00024 21.3 0.8 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF3484 PF11983.8 ORF44419 - 0.95 10.6 6.7 2.4 9.3 6.7 1.8 1 1 0 1 1 1 0 Membrane-attachment and polymerisation-promoting switch DUF2076 PF09849.9 ORF44419 - 6.5 6.7 8.2 8.3 6.4 8.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF2791 PF10923.8 ORF43382 - 0.23 10.3 0.0 0.26 10.1 0.0 1.0 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) Arrestin_N PF00339.29 ORF43105 - 3.6e-08 33.6 0.0 4.4e-08 33.3 0.0 1.0 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Cyt-b5 PF00173.28 ORF43011 - 5.1e-17 61.8 0.0 6.7e-17 61.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain MHB PF16525.5 ORF43011 - 0.16 12.2 0.0 0.28 11.5 0.0 1.5 1 1 0 1 1 1 0 Haemophore, haem-binding Asp-B-Hydro_N PF05279.11 ORF41988 - 3.7 7.6 15.8 4.4 7.3 15.8 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region PDZ_6 PF17820.1 ORF40253 - 3e-06 27.0 0.1 0.061 13.2 0.0 2.5 2 1 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF40253 - 0.00022 21.5 0.2 1.2 9.5 0.1 2.9 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF40253 - 0.007 16.7 0.0 1.4 9.2 0.0 2.4 2 1 0 2 2 2 2 PDZ domain IcmF_C PF06744.12 ORF39807 - 0.049 13.2 0.0 0.061 12.9 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion protein IcmF C-terminal DUF1298 PF06974.13 ORF37746 - 3.6e-13 49.7 0.1 3.9e-13 49.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Eclosion PF04736.12 ORF36769 - 2.8 7.7 11.1 0.098 12.4 4.4 2.0 1 1 1 2 2 2 0 Eclosion hormone DUF2863 PF11062.8 ORF35914 - 0.16 10.3 3.8 0.2 10.0 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2863) DUF4407 PF14362.6 ORF35914 - 1 8.7 12.4 1.3 8.3 12.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GrpE PF01025.19 ORF35914 - 1.4 8.5 19.0 2.3 7.9 19.0 1.4 1 0 0 1 1 1 0 GrpE Allexi_40kDa PF05549.11 ORF35914 - 2.5 7.6 8.5 3 7.3 8.5 1.3 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF948 PF06103.11 ORF35914 - 2.7 8.3 6.3 2.7 8.3 4.2 2.1 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF3160 PF11369.8 ORF35914 - 4.4 5.6 16.4 0.28 9.6 8.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3160) Exonuc_VII_L PF02601.15 ORF35914 - 9.4 5.7 16.4 11 5.4 16.4 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Endothelin PF00322.17 ORF34952 - 0.85 9.3 5.5 1.4 8.6 5.5 1.3 1 0 0 1 1 1 0 Endothelin family PDZ_6 PF17820.1 ORF34201 - 4.6e-06 26.4 0.1 0.098 12.5 0.0 2.5 2 1 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF34201 - 0.00085 19.6 0.1 1.7 9.0 0.0 2.9 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF34201 - 0.003 17.8 0.0 1.4 9.2 0.0 2.4 2 1 0 2 2 2 2 PDZ domain Pkinase PF00069.25 ORF33914 - 3e-14 53.0 0.0 3.5e-14 52.8 0.0 1.2 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33914 - 0.02 14.2 0.0 0.036 13.4 0.0 1.4 1 1 0 1 1 1 0 Protein tyrosine kinase Pkinase PF00069.25 ORF33824 - 5.3e-36 124.3 0.0 5.7e-36 124.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33824 - 6.3e-17 61.7 0.0 6.9e-17 61.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF33824 - 0.0021 17.1 0.0 0.0021 17.1 0.0 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 ORF33824 - 0.0093 15.0 0.1 0.012 14.7 0.1 1.2 1 0 0 1 1 1 1 Seadornavirus VP7 Kdo PF06293.14 ORF33824 - 0.12 11.7 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family GSH_synth_ATP PF03917.17 ORF33684 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF33684 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF33684 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF33684 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family HycH PF07450.11 ORF32494 - 5.2e-56 188.5 0.0 5.8e-56 188.4 0.0 1.0 1 0 0 1 1 1 1 Formate hydrogenlyase maturation protein HycH Macro PF01661.21 ORF31474 - 5.4e-13 49.0 0.0 8.2e-13 48.4 0.0 1.3 1 0 0 1 1 1 1 Macro domain RNA_pol_Rpc34 PF05158.12 ORF30547 - 1e-07 31.7 0.0 1.1e-07 31.6 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit TPR_1 PF00515.28 ORF3010 - 9e-07 28.5 2.8 0.00092 18.9 0.5 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF3010 - 9.1e-07 28.5 1.9 0.00078 19.4 0.2 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF3010 - 0.00095 19.2 1.2 0.4 11.0 0.2 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF3010 - 0.001 19.7 0.0 0.015 16.1 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF3010 - 0.009 16.5 0.6 0.076 13.5 0.1 2.5 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF3010 - 0.13 12.9 1.1 1.8 9.4 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF3010 - 0.66 10.5 3.0 23 5.7 0.0 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat Pterin_4a PF01329.19 ORF29604 - 1.2e-12 47.8 0.0 1.7e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase AP4E_app_platf PF14807.6 ORF29544 - 0.045 14.1 0.1 0.087 13.2 0.1 1.5 1 1 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform EABR PF12180.8 ORF28937 - 0.021 14.4 0.4 0.044 13.4 0.4 1.5 1 0 0 1 1 1 0 TSG101 and ALIX binding domain of CEP55 Eno-Rase_FAD_bd PF07055.12 ORF28497 - 0.16 12.4 0.0 0.29 11.6 0.0 1.4 1 0 0 1 1 1 0 Enoyl reductase FAD binding domain RIC3 PF15361.6 ORF27787 - 0.013 15.8 0.1 0.02 15.3 0.1 1.2 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 DUF4446 PF14584.6 ORF27787 - 0.028 14.4 0.8 0.039 13.9 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) EMP24_GP25L PF01105.24 ORF27787 - 0.029 14.3 0.9 0.041 13.8 0.9 1.4 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD DUF4834 PF16118.5 ORF27787 - 0.041 14.8 0.9 0.07 14.1 0.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) MitMem_reg PF13012.6 ORF27787 - 0.096 13.1 0.4 0.15 12.4 0.4 1.3 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function STAT_int PF02865.17 ORF27336 - 0.057 13.9 0.0 0.078 13.4 0.0 1.2 1 0 0 1 1 1 0 STAT protein, protein interaction domain RhaT PF06379.12 ORF26955 - 0.052 12.7 1.6 0.064 12.4 1.6 1.2 1 0 0 1 1 1 0 L-rhamnose-proton symport protein (RhaT) MerR-DNA-bind PF09278.11 ORF26417 - 0.024 15.2 7.0 0.11 13.0 1.2 2.2 2 0 0 2 2 2 0 MerR, DNA binding FliD_N PF02465.18 ORF26417 - 0.069 13.8 1.9 0.073 13.8 0.7 1.6 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF4407 PF14362.6 ORF26417 - 0.14 11.5 3.3 0.16 11.3 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4986 PF16375.5 ORF26417 - 0.22 12.2 1.0 0.34 11.6 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function OmpH PF03938.14 ORF26417 - 0.26 11.6 10.6 0.41 11.0 10.6 1.3 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Macoilin PF09726.9 ORF26417 - 0.33 9.5 7.4 0.39 9.2 7.4 1.0 1 0 0 1 1 1 0 Macoilin family DASH_Spc19 PF08287.11 ORF26417 - 0.33 10.8 9.1 0.43 10.5 9.1 1.1 1 0 0 1 1 1 0 Spc19 YojJ PF10372.9 ORF26417 - 1.1 9.4 3.8 0.45 10.6 1.6 1.5 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus G-gamma PF00631.22 ORF26417 - 4.1 7.5 5.7 32 4.6 4.5 2.5 2 1 1 3 3 3 0 GGL domain GSH_synth_ATP PF03917.17 ORF26332 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF26332 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF26332 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF26332 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family CinA PF02464.17 ORF26226 - 0.075 12.6 0.1 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 Competence-damaged protein Flavodoxin_NdrI PF07972.11 ORF26150 - 2.1e-48 163.5 0.0 2.4e-48 163.3 0.0 1.0 1 0 0 1 1 1 1 NrdI Flavodoxin like DUF229 PF02995.17 ORF25832 - 2.8e-10 39.4 1.4 1.5e-09 37.1 1.4 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF229) DUF3232 PF11554.8 ORF25832 - 0.005 17.2 0.3 0.0071 16.7 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3232) WD40 PF00400.32 ORF25550 - 4.3e-26 90.6 4.8 2.5e-09 37.6 0.1 3.2 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF25550 - 3.4e-12 46.5 0.3 1.1e-05 25.6 0.1 2.7 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain IKI3 PF04762.12 ORF25550 - 5.6e-05 21.4 0.8 0.00031 18.9 0.8 1.8 1 1 0 1 1 1 1 IKI3 family eIF2A PF08662.11 ORF25550 - 0.00078 19.4 0.2 0.0013 18.6 0.2 1.4 1 1 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A PD40 PF07676.12 ORF25550 - 0.023 14.7 0.1 22 5.2 0.0 3.4 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat IBR PF01485.21 ORF25398 - 0.00014 22.1 13.9 0.00023 21.3 13.9 1.4 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain DivIC PF04977.15 ORF25385 - 0.015 15.0 4.0 0.38 10.5 0.1 2.4 2 1 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF25385 - 0.028 14.6 5.6 0.063 13.5 1.0 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Imm51 PF15595.6 ORF25385 - 0.035 14.1 2.4 1.9 8.4 0.4 2.2 2 0 0 2 2 2 0 Immunity protein 51 ABC_tran_CTD PF16326.5 ORF25385 - 0.052 13.8 8.1 0.07 13.4 1.1 3.0 3 0 0 3 3 3 0 ABC transporter C-terminal domain KELK PF15796.5 ORF25385 - 0.075 13.5 0.6 0.075 13.5 0.6 2.3 2 1 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase V-ATPase_G_2 PF16999.5 ORF25385 - 0.13 12.7 1.2 1.6 9.2 0.0 2.1 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF1943 PF09172.11 ORF25385 - 0.18 11.0 5.1 0.19 10.9 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) FeoB_Cyto PF17910.1 ORF25385 - 1.3 9.6 6.1 0.59 10.7 0.5 2.3 2 1 0 2 2 2 0 FeoB cytosolic helical domain CCDC24 PF15669.5 ORF24064 - 2.8 7.8 7.2 3.7 7.4 7.2 1.4 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 24 family TPR_17 PF13431.6 ORF23236 - 0.00048 20.3 0.1 0.0054 17.0 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF23236 - 0.0058 16.3 0.3 0.026 14.2 0.0 2.0 2 0 0 2 2 2 1 TPR repeat DUF4855 PF16147.5 ORF23236 - 0.014 14.5 0.0 0.017 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4855) Paramyxo_PNT PF14320.6 ORF23236 - 0.036 13.2 0.0 0.044 13.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoprotein P region PNT disordered TPR_1 PF00515.28 ORF23236 - 1.5 8.8 6.5 19 5.3 0.0 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat Band_3_cyto PF07565.13 ORF22747 - 0.3 10.9 5.8 0.37 10.6 5.8 1.0 1 0 0 1 1 1 0 Band 3 cytoplasmic domain Saf_2TM PF18303.1 ORF21807 - 0.062 12.9 0.1 0.083 12.5 0.1 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain LapA_dom PF06305.11 ORF21807 - 0.07 13.0 0.2 0.1 12.4 0.2 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Glycoprotein_G PF00802.19 ORF20283 - 0.0013 18.2 7.7 0.0015 17.9 7.7 1.0 1 0 0 1 1 1 1 Pneumovirus attachment glycoprotein G DUF229 PF02995.17 ORF20091 - 2.8e-10 39.4 1.4 1.5e-09 37.1 1.4 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF229) DUF3232 PF11554.8 ORF20091 - 0.005 17.2 0.3 0.0071 16.7 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3232) DUF229 PF02995.17 ORF19180 - 2.8e-10 39.4 1.4 1.5e-09 37.1 1.4 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF229) DUF3232 PF11554.8 ORF19180 - 0.005 17.2 0.3 0.0071 16.7 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3232) Pyrophosphatase PF00719.19 ORF18775 - 0.034 14.0 0.2 0.042 13.7 0.2 1.1 1 0 0 1 1 1 0 Inorganic pyrophosphatase STAT_int PF02865.17 ORF18667 - 0.057 13.9 0.0 0.078 13.4 0.0 1.2 1 0 0 1 1 1 0 STAT protein, protein interaction domain STAT_int PF02865.17 ORF18614 - 0.057 13.9 0.0 0.078 13.4 0.0 1.2 1 0 0 1 1 1 0 STAT protein, protein interaction domain PMM PF03332.13 ORF17812 - 3.6e-56 190.4 0.1 4e-56 190.3 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic phosphomannomutase S6PP PF05116.13 ORF17812 - 0.093 12.2 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Sucrose-6F-phosphate phosphohydrolase Mesd PF10185.9 ORF16527 - 0.00058 19.8 0.0 0.00073 19.5 0.0 1.1 1 0 0 1 1 1 1 Chaperone for wingless signalling and trafficking of LDL receptor SID-1_RNA_chan PF13965.6 ORF15888 - 0.016 13.7 0.1 0.016 13.6 0.1 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF2417 PF10329.9 ORF15888 - 1.2 8.5 3.5 0.6 9.5 0.2 2.0 1 1 1 2 2 2 0 Region of unknown function (DUF2417) STAT_int PF02865.17 ORF14820 - 0.057 13.9 0.0 0.078 13.4 0.0 1.2 1 0 0 1 1 1 0 STAT protein, protein interaction domain GSH_synth_ATP PF03917.17 ORF13479 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF13479 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF13479 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF13479 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family Ephrin_rec_like PF07699.13 ORF13436 - 0.05 13.4 1.0 8.3 6.3 0.1 2.6 2 0 0 2 2 2 0 Putative ephrin-receptor like DUF1145 PF06611.12 ORF13436 - 0.15 12.1 1.0 13 5.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1145) Integrase_Zn PF02022.19 ORF13436 - 0.38 10.7 1.6 26 4.9 0.1 2.9 3 0 0 3 3 3 0 Integrase Zinc binding domain DUF4744 PF15918.5 ORF12934 - 0.0045 17.8 0.9 0.008 17.0 0.9 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4744) TB2_DP1_HVA22 PF03134.19 ORF12600 - 1.1e-16 60.5 3.7 1.6e-16 60.0 3.7 1.2 1 0 0 1 1 1 1 TB2/DP1, HVA22 family GSH_synth_ATP PF03917.17 ORF1205 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF1205 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF1205 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF1205 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family Borrelia_lipo_1 PF05714.11 ORF11509 - 0.00068 19.5 5.1 0.00084 19.2 4.7 1.2 1 1 0 1 1 1 1 Borrelia burgdorferi virulent strain associated lipoprotein CMAS PF02353.20 ORF11509 - 0.037 13.3 0.2 0.047 13.0 0.2 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Histone PF00125.24 ORF11484 - 2.5e-53 179.9 2.7 2.8e-53 179.8 2.7 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF11484 - 7.8e-06 26.5 1.3 9.9e-06 26.2 1.3 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF11484 - 9.7e-05 22.7 0.0 0.00014 22.1 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF11484 - 0.00039 20.5 0.1 0.00075 19.6 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF11484 - 0.0018 18.5 0.1 0.0042 17.3 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF11484 - 0.059 13.4 0.0 0.082 13.0 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit DnaJ PF00226.31 ORF1123 - 2.8e-14 53.0 0.1 4e-14 52.5 0.1 1.2 1 0 0 1 1 1 1 DnaJ domain MAM33 PF02330.16 ORF112093 - 1e-07 32.2 3.3 1.3e-07 31.8 3.3 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein SERTA PF06031.13 ORF112093 - 0.15 11.8 0.7 0.29 10.8 0.7 1.4 1 0 0 1 1 1 0 SERTA motif PSD5 PF07637.11 ORF11173 - 0.025 14.9 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1595) BPD_transp_2 PF02653.16 ORF111584 - 6.8 5.8 15.6 0.12 11.5 3.6 2.0 1 1 1 2 2 2 0 Branched-chain amino acid transport system / permease component B56 PF01603.20 ORF111353 - 4.1e-32 111.7 2.2 4.7e-32 111.5 2.2 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) Asp-B-Hydro_N PF05279.11 ORF111183 - 3.7 7.6 15.8 4.4 7.3 15.8 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region VGPC1_C PF16799.5 ORF110432 - 0.0036 17.2 0.2 0.0036 17.2 0.2 2.4 2 0 0 2 2 2 1 C-terminal membrane-localisation domain of ion-channel, VCN1 GIT_CC PF16559.5 ORF110432 - 0.075 12.9 5.5 2.2 8.2 0.3 3.2 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor GAS PF13851.6 ORF110432 - 0.11 11.9 15.4 0.18 11.1 15.4 1.3 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding P4Ha_N PF08336.11 ORF110432 - 0.45 10.5 8.7 5.2 7.1 8.7 2.3 1 1 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region DUF4164 PF13747.6 ORF110432 - 0.88 9.9 8.1 0.085 13.1 3.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF110432 - 1.2 9.0 9.0 1.8 8.4 3.0 2.7 2 1 1 3 3 3 0 Septum formation initiator APG6_N PF17675.1 ORF110432 - 1.6 9.3 15.9 2 9.0 8.4 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Csm1_N PF18504.1 ORF110432 - 7.4 7.0 12.0 0.58 10.5 2.0 3.0 2 1 1 3 3 3 0 Csm1 N-terminal domain MORN PF02493.20 ORF110239 - 5.3e-16 57.5 37.9 4.5e-08 32.5 3.2 5.9 6 1 0 6 6 6 4 MORN repeat DUF3048_C PF17479.2 ORF110239 - 0.3 11.5 12.3 0.67 10.4 0.6 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain PARP PF00644.20 ORF108955 - 1e-05 25.2 0.0 1.8e-05 24.4 0.0 1.5 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain MORN PF02493.20 ORF108514 - 3.3e-17 61.3 32.0 2.7e-06 27.0 4.3 5.4 5 1 0 5 5 5 4 MORN repeat DUF3048_C PF17479.2 ORF108514 - 0.13 12.7 6.0 3.3 8.1 6.0 2.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain SLATT_1 PF18181.1 ORF107986 - 0.13 12.2 0.1 9.7 6.1 0.0 2.1 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 SH3_3 PF08239.11 ORF107069 - 0.00022 21.5 0.2 0.0004 20.6 0.2 1.6 1 1 0 1 1 1 1 Bacterial SH3 domain Golgin_A5 PF09787.9 ORF107025 - 0.0045 16.5 0.2 0.0054 16.2 0.2 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 DUF4618 PF15397.6 ORF107025 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) HMMR_N PF15905.5 ORF107025 - 0.023 14.2 0.1 0.026 14.0 0.1 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Streptin-Immun PF11083.8 ORF107025 - 0.049 14.0 0.2 0.066 13.6 0.2 1.1 1 0 0 1 1 1 0 Lantibiotic streptin immunity protein Terminase_3C PF17288.2 ORF107025 - 0.061 13.7 0.1 0.081 13.3 0.1 1.1 1 0 0 1 1 1 0 Terminase RNAseH like domain DUF4446 PF14584.6 ORF107025 - 0.082 12.9 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) Got1 PF04178.12 ORF105109 - 1.9e-17 63.7 12.7 2.8e-17 63.2 12.7 1.3 1 0 0 1 1 1 1 Got1/Sft2-like family GSH_synth_ATP PF03917.17 ORF104207 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF104207 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF104207 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF104207 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family Nucleoside_tran PF01733.18 ORF103692 - 2.2e-09 37.2 9.1 2.3e-09 37.1 9.1 1.0 1 0 0 1 1 1 1 Nucleoside transporter LpoB PF13036.6 ORF103483 - 0.011 15.7 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB UPF0231 PF06062.11 ORF103396 - 4.6e-41 139.9 2.0 5.3e-41 139.7 2.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0231) BST2 PF16716.5 ORF103237 - 2.1 9.0 11.5 1.6 9.4 6.1 2.0 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Pterin_4a PF01329.19 ORF102839 - 4.1e-13 49.3 0.0 5.5e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase DNA_pack_N PF02500.15 ORF102839 - 0.071 12.9 0.1 0.075 12.9 0.1 1.0 1 0 0 1 1 1 0 Probable DNA packing protein, N-terminus LpoB PF13036.6 ORF102801 - 0.011 15.7 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB UPF0223 PF05256.12 ORF102665 - 0.047 14.0 1.9 0.94 9.9 0.1 2.6 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0223) EssA PF10661.9 ORF102300 - 3.2e-05 23.8 2.8 4.1e-05 23.5 2.8 1.1 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein EssA Zip PF02535.22 ORF102300 - 0.13 11.5 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF102300 - 0.13 11.0 1.2 0.17 10.6 1.2 1.1 1 0 0 1 1 1 0 Presenilin ATG27 PF09451.10 ORF102300 - 0.14 12.0 2.3 0.18 11.6 2.3 1.3 1 1 0 1 1 1 0 Autophagy-related protein 27 Vpu PF00558.19 ORF102300 - 9.8 6.0 11.1 14 5.6 5.9 2.3 2 1 0 2 2 2 0 Vpu protein GSH_synth_ATP PF03917.17 ORF101261 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF101261 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF101261 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF101261 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family SIP1 PF04938.12 ORF101254 - 0.075 12.7 0.3 0.12 12.0 0.3 1.4 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) MutS_V PF00488.21 ORF101085 - 1.5e-45 155.5 0.1 1.7e-45 155.4 0.1 1.0 1 0 0 1 1 1 1 MutS domain V DUF3236 PF11576.8 ORF101085 - 0.034 13.8 0.2 0.058 13.1 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3236) DUF4796 PF16044.5 ORF101085 - 0.038 13.6 0.0 0.044 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4796) PsiE PF06146.12 ORF100904 - 3.6e-16 59.3 5.5 3.6e-16 59.3 5.5 1.9 3 0 0 3 3 3 1 Phosphate-starvation-inducible E DUF2208 PF09973.9 ORF100904 - 0.34 10.5 7.5 0.038 13.6 2.7 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2208) Ytca PF17090.5 ORF100904 - 5.6 7.6 8.9 0.21 12.1 2.3 2.0 2 1 0 2 2 2 0 Uncharacterised protein family GSH_synth_ATP PF03917.17 ORF10087 - 1e-23 83.8 0.1 1.1e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Dala_Dala_lig_C PF07478.13 ORF10087 - 0.0011 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 ORF10087 - 0.07 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ndc80_HEC PF03801.13 ORF10087 - 0.13 11.9 0.3 0.24 11.0 0.3 1.5 1 1 0 1 1 1 0 HEC/Ndc80p family Ipi1_N PF12333.8 NODE_47561_length_403_cov_1.875000_g39710_i0reverse_frame_1 - 0.083 13.5 0.9 0.14 12.8 0.9 1.3 1 0 0 1 1 1 0 Rix1 complex component involved in 60S ribosome maturation Ribosomal_L29e PF01779.17 NODE_47554_length_403_cov_2.258152_g39703_i0forward_frame_1 - 0.17 12.2 0.3 0.17 12.2 0.3 2.4 2 0 0 2 2 2 0 Ribosomal L29e protein family Response_reg PF00072.24 NODE_47543_length_403_cov_2.836957_g39692_i0reverse_frame_1 - 2.6e-22 79.1 0.0 3.3e-22 78.8 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain GDP_Man_Dehyd PF16363.5 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 1.6e-43 149.4 0.1 1.9e-43 149.2 0.1 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 2.5e-31 109.0 0.0 2.8e-31 108.8 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 9.2e-10 38.1 0.0 1.1e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 0.002 17.3 0.0 0.0049 16.0 0.0 1.6 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 0.015 14.4 0.1 0.027 13.6 0.1 1.4 1 1 0 1 1 1 0 RmlD substrate binding domain FANCA_interact PF15751.5 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 0.11 13.0 0.1 0.15 12.6 0.1 1.2 1 0 0 1 1 1 0 FAAP20 FANCA interaction domain adh_short PF00106.25 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 0.15 11.5 0.0 0.58 9.6 0.0 1.7 2 0 0 2 2 2 0 short chain dehydrogenase Na_H_antiport_1 PF06965.12 NODE_47538_length_403_cov_3.489130_g39687_i0reverse_frame_1 - 8.8e-15 54.4 0.2 1e-14 54.2 0.2 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter 1 Keratin_matx PF04579.12 NODE_47537_length_403_cov_3.641304_g39686_i0forward_frame_1 - 0.085 13.2 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein RRXRR PF14239.6 NODE_47536_length_403_cov_3.760870_g39685_i0reverse_frame_1 - 0.13 12.1 3.2 0.19 11.6 3.2 1.2 1 0 0 1 1 1 0 RRXRR protein DCP1 PF06058.13 NODE_47532_length_403_cov_15.899457_g39681_i0reverse_frame_1 - 0.037 13.9 1.8 0.056 13.4 0.6 1.9 2 0 0 2 2 2 0 Dcp1-like decapping family FapA PF03961.13 NODE_47526_length_403_cov_52.926630_g39675_i0reverse_frame_1 - 1.3 7.6 11.2 1.4 7.4 11.2 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF5090 PF17009.5 NODE_47477_length_403_cov_330.633152_g39626_i0reverse_frame_1 - 7.2 6.5 17.8 10 6.0 17.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) ASC PF00858.24 NODE_47468_length_404_cov_1.249322_g39619_i0forward_frame_1 - 0.0015 17.6 0.1 0.002 17.2 0.1 1.2 1 0 0 1 1 1 1 Amiloride-sensitive sodium channel GHMP_kinases_N PF00288.26 NODE_47458_length_404_cov_2.059621_g39609_i0reverse_frame_1 - 0.013 15.7 0.0 0.02 15.2 0.0 1.3 1 0 0 1 1 1 0 GHMP kinases N terminal domain HSP90 PF00183.18 NODE_47453_length_404_cov_2.436314_g39604_i0reverse_frame_1 - 0.011 14.7 3.0 0.013 14.4 3.0 1.1 1 0 0 1 1 1 0 Hsp90 protein DUF3605 PF12239.8 NODE_47449_length_404_cov_3.262873_g39600_i0reverse_frame_1 - 0.0052 17.1 0.0 0.0071 16.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3605) TPR_1 PF00515.28 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 1e-13 50.4 0.2 1.4e-07 31.0 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 3e-10 39.4 0.1 1.7e-05 24.6 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 7e-08 32.7 0.1 0.0076 16.5 0.0 2.8 3 1 1 4 4 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 8.3e-08 31.9 0.0 0.00082 19.4 0.0 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 6.9e-05 22.6 0.2 0.0078 16.2 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.0013 19.4 0.0 0.069 13.8 0.0 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.0067 17.2 0.0 0.074 13.9 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.019 15.2 0.2 0.51 10.6 0.2 2.2 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.019 14.6 0.9 0.033 13.9 0.1 1.9 2 1 0 2 2 2 0 TPR repeat Coatomer_E PF04733.14 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.061 12.7 0.0 0.079 12.4 0.0 1.3 1 1 0 1 1 1 0 Coatomer epsilon subunit TPR_6 PF13174.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.077 13.7 0.0 0.3 11.8 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat Tox-HDC PF15656.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.15 12.2 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 Toxin with a H, D/N and C signature Titin_Ig-rpts PF06582.12 NODE_47446_length_404_cov_4.617886_g39597_i0forward_frame_1 - 0.4 10.7 5.5 19 5.3 0.3 3.4 3 0 0 3 3 3 0 Titin repeat DnaJ PF00226.31 NODE_47439_length_404_cov_61.360434_g39591_i0forward_frame_1 - 9.3e-18 64.1 0.5 9.3e-18 64.1 0.5 1.7 2 0 0 2 2 2 1 DnaJ domain NTPase_I-T PF01931.18 NODE_47439_length_404_cov_61.360434_g39591_i0forward_frame_1 - 0.03 14.1 0.0 0.049 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF84 E2F_CC-MB PF16421.5 NODE_47439_length_404_cov_61.360434_g39591_i0forward_frame_1 - 0.15 12.5 1.9 0.2 12.0 1.9 1.4 1 1 0 1 1 1 0 E2F transcription factor CC-MB domain RRM_7 PF16367.5 NODE_47437_length_404_cov_66.867209_g39589_i0forward_frame_1 - 0.066 13.3 0.4 2.8 8.1 0.2 2.1 1 1 1 2 2 2 0 RNA recognition motif ribosomal_L24 PF17136.4 NODE_47433_length_404_cov_77.761518_g39585_i0reverse_frame_1 - 5.1e-12 46.0 0.0 1.2e-11 44.8 0.0 1.6 1 0 0 1 1 1 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 MTS PF05175.14 NODE_47423_length_404_cov_100.631436_g39575_i0reverse_frame_1 - 0.017 14.6 0.1 0.029 13.9 0.1 1.5 1 1 0 1 1 1 0 Methyltransferase small domain Rsm1 PF08600.10 NODE_47423_length_404_cov_100.631436_g39575_i0reverse_frame_1 - 0.047 13.9 0.1 0.062 13.5 0.1 1.2 1 0 0 1 1 1 0 Rsm1-like SURF2 PF05477.11 NODE_47402_length_404_cov_282.151762_g39554_i0reverse_frame_1 - 0.61 9.7 8.4 0.75 9.4 8.4 1.2 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) Cyclin_C PF02984.19 NODE_47384_length_405_cov_2.124324_g39539_i0reverse_frame_1 - 0.12 12.5 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Cyclin, C-terminal domain Glyco_hydro_72 PF03198.14 NODE_47380_length_405_cov_2.256757_g39535_i0reverse_frame_1 - 1.2e-14 54.3 0.0 2.2e-14 53.4 0.0 1.4 1 1 0 1 1 1 1 Glucanosyltransferase DUF2244 PF10003.9 NODE_47377_length_405_cov_2.464865_g39532_i0reverse_frame_1 - 0.45 10.2 2.4 0.63 9.7 2.4 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) K1377 PF15352.6 NODE_47376_length_405_cov_2.572973_g39531_i0reverse_frame_1 - 0.41 8.8 4.1 1.4 7.1 3.4 1.7 1 1 0 1 1 1 0 Susceptibility to monomelic amyotrophy TMEM223 PF14640.6 NODE_47361_length_405_cov_51.986486_g39516_i0reverse_frame_1 - 0.054 13.7 0.1 0.066 13.4 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 223 DUF3678 PF12435.8 NODE_47359_length_405_cov_58.297297_g39514_i0forward_frame_1 - 0.058 12.8 0.1 0.058 12.8 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) Urocanase PF01175.18 NODE_47352_length_405_cov_70.718919_g39507_i0reverse_frame_1 - 0.053 13.2 0.3 0.077 12.6 0.2 1.3 1 1 0 1 1 1 0 Urocanase Rossmann-like domain Na_H_antiport_1 PF06965.12 NODE_47350_length_405_cov_75.424324_g39505_i0forward_frame_1 - 0.77 8.5 3.3 0.17 10.7 0.4 1.4 1 1 0 2 2 2 0 Na+/H+ antiporter 1 EVC2_like PF12297.8 NODE_47350_length_405_cov_75.424324_g39505_i0forward_frame_1 - 1.5 7.4 2.9 1.9 7.1 2.9 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Cuticle_4 PF15955.5 NODE_47349_length_405_cov_76.829730_g39504_i0reverse_frame_1 - 0.12 13.1 0.2 0.19 12.5 0.2 1.4 1 0 0 1 1 1 0 Cuticle protein SOCS_box PF07525.16 NODE_47349_length_405_cov_76.829730_g39504_i0forward_frame_1 - 0.0091 16.3 0.4 0.073 13.4 0.5 2.2 2 0 0 2 2 2 1 SOCS box DUF1010 PF06231.11 NODE_47341_length_405_cov_93.929730_g39496_i0reverse_frame_1 - 0.33 11.5 7.2 0.077 13.5 3.8 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1010) CAF1C_H4-bd PF12265.8 NODE_47340_length_405_cov_94.386486_g39495_i0reverse_frame_1 - 0.036 14.3 0.1 0.062 13.6 0.1 1.3 1 0 0 1 1 1 0 Histone-binding protein RBBP4 or subunit C of CAF1 complex UvrB PF12344.8 NODE_47339_length_405_cov_97.456757_g39494_i0forward_frame_1 - 0.98 9.3 3.3 7.4 6.5 0.1 2.2 2 0 0 2 2 2 0 Ultra-violet resistance protein B FPV060 PF17614.2 NODE_47331_length_405_cov_129.664865_g39486_i0forward_frame_1 - 0.38 10.1 3.7 0.68 9.3 3.7 1.3 1 0 0 1 1 1 0 Viral CC-type chemokine MIT_LIKE_ACTX PF17556.2 NODE_47327_length_405_cov_164.535135_g39482_i0forward_frame_1 - 0.036 14.7 1.4 0.52 10.9 1.4 2.2 1 1 0 1 1 1 0 MIT-like atracotoxin family HCMV_UL139 PF12507.8 NODE_47317_length_405_cov_281.183784_g39472_i0reverse_frame_1 - 0.077 13.4 0.2 0.1 13.0 0.2 1.2 1 0 0 1 1 1 0 Human Cytomegalovirus UL139 protein Rubella_Capsid PF05750.11 NODE_47306_length_405_cov_3801.051351_g39462_i0forward_frame_1 - 0.42 10.2 4.3 0.48 10.0 4.3 1.1 1 0 0 1 1 1 0 Rubella capsid protein Menin PF05053.13 NODE_47306_length_405_cov_3801.051351_g39462_i0forward_frame_1 - 8.8 4.5 11.7 9.9 4.4 11.7 1.0 1 0 0 1 1 1 0 Menin DUF4211 PF13926.6 NODE_47303_length_406_cov_1.687332_g39460_i0forward_frame_3 - 0.00059 19.9 1.0 0.0006 19.9 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4211) CLPTM1 PF05602.12 NODE_47300_length_406_cov_1.916442_g39457_i0reverse_frame_3 - 0.00093 18.3 0.9 0.0013 17.8 0.9 1.3 1 1 0 1 1 1 1 Cleft lip and palate transmembrane protein 1 (CLPTM1) Herpes_BBRF1 PF04793.12 NODE_47300_length_406_cov_1.916442_g39457_i0forward_frame_2 - 0.016 14.3 0.3 0.018 14.1 0.3 1.1 1 0 0 1 1 1 0 BRRF1-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks168.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks168.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks168.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks168.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:57:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Spt5_N PF11942.8 NODE_47297_length_406_cov_2.167116_g39454_i0reverse_frame_3 - 0.053 14.5 1.3 0.067 14.2 1.3 1.1 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal Ni_hydr_CYTB PF01292.20 NODE_47288_length_406_cov_2.760108_g39445_i0forward_frame_3 - 2e-12 47.1 7.1 2e-12 47.1 7.1 1.9 2 0 0 2 2 2 1 Prokaryotic cytochrome b561 DUF2975 PF11188.8 NODE_47288_length_406_cov_2.760108_g39445_i0forward_frame_3 - 0.99 9.3 6.7 4.1 7.3 6.7 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2975) Hydrolase_4 PF12146.8 NODE_47285_length_406_cov_3.215633_g39442_i0forward_frame_3 - 0.0006 19.2 0.0 0.00069 19.0 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 PAF-AH_p_II PF03403.13 NODE_47285_length_406_cov_3.215633_g39442_i0forward_frame_3 - 0.00081 18.0 0.1 0.0011 17.6 0.1 1.3 1 1 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II Abhydrolase_6 PF12697.7 NODE_47285_length_406_cov_3.215633_g39442_i0forward_frame_3 - 0.022 15.4 0.1 0.026 15.1 0.1 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 NODE_47285_length_406_cov_3.215633_g39442_i0forward_frame_3 - 0.028 14.2 0.0 0.043 13.6 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 NODE_47285_length_406_cov_3.215633_g39442_i0forward_frame_3 - 0.036 13.7 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold Chlorophyllase2 PF12740.7 NODE_47285_length_406_cov_3.215633_g39442_i0forward_frame_3 - 0.17 10.7 0.0 0.21 10.5 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase enzyme DUF4587 PF15248.6 NODE_47283_length_406_cov_3.490566_g39440_i0reverse_frame_3 - 0.026 15.3 0.2 0.044 14.6 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4587) PfkB PF00294.24 NODE_47282_length_406_cov_3.927224_g39439_i0forward_frame_3 - 5.1e-18 65.4 0.0 5.6e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phage_r1t_holin PF16945.5 NODE_47280_length_406_cov_10.611860_g39437_i0forward_frame_3 - 0.0032 17.6 0.7 0.012 15.8 0.3 1.9 2 0 0 2 2 2 1 Putative lactococcus lactis phage r1t holin DUF3874 PF12990.7 NODE_47270_length_406_cov_73.528302_g39427_i0forward_frame_2 - 0.11 12.9 0.0 0.19 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknonw function from B. Theta Gene description (DUF3874) LuxC PF05893.14 NODE_47269_length_406_cov_76.045822_g39426_i0reverse_frame_3 - 0.038 13.0 0.1 0.053 12.6 0.1 1.1 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) Ins134_P3_kin PF05770.11 NODE_47269_length_406_cov_76.045822_g39426_i0forward_frame_3 - 0.08 12.4 0.4 0.095 12.2 0.4 1.0 1 0 0 1 1 1 0 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain zinc_ribbon_5 PF13719.6 NODE_47269_length_406_cov_76.045822_g39426_i0forward_frame_2 - 0.029 14.1 0.3 0.053 13.3 0.3 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Kelch_4 PF13418.6 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 1e-08 35.1 1.8 0.00017 21.5 0.1 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 4.2e-08 33.3 0.4 4.6e-05 23.6 0.1 3.0 3 0 0 3 3 3 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 1.2e-07 31.5 0.7 0.0027 17.7 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 3.5e-07 29.9 0.6 0.0008 19.3 0.0 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 1.5e-06 28.2 1.0 0.0016 18.7 0.2 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 6e-05 22.6 0.4 0.0029 17.2 0.1 2.3 2 1 0 2 2 2 1 Kelch motif His_binding PF02098.16 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 0.1 12.6 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Tick histamine binding protein Mtf2_C PF14061.6 NODE_47258_length_406_cov_99.924528_g39416_i0forward_frame_3 - 0.16 12.1 0.1 0.29 11.4 0.1 1.3 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 Phage_P2_GpE PF06528.12 NODE_47258_length_406_cov_99.924528_g39416_i0forward_frame_3 - 0.92 9.1 2.6 2.8 7.5 0.2 2.2 2 0 0 2 2 2 0 Phage P2 GpE DUF983 PF06170.12 NODE_47254_length_406_cov_110.285714_g39412_i0reverse_frame_3 - 2.7 8.5 9.1 7.5 7.0 2.5 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF983) DnaJ_C PF01556.18 NODE_47254_length_406_cov_110.285714_g39412_i0forward_frame_3 - 1.3e-27 96.7 0.2 1.5e-27 96.5 0.2 1.0 1 0 0 1 1 1 1 DnaJ C terminal domain HTH_16 PF12645.7 NODE_47254_length_406_cov_110.285714_g39412_i0forward_frame_3 - 0.022 14.8 0.5 0.13 12.3 0.0 2.2 2 1 0 2 2 2 0 Helix-turn-helix domain DUF4537 PF15057.6 NODE_47252_length_406_cov_114.253369_g39410_i0forward_frame_3 - 0.13 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4537) DUF1631 PF07793.11 NODE_47249_length_406_cov_133.892183_g39408_i0reverse_frame_2 - 0.022 13.2 7.5 0.028 12.9 7.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) TetR_C_11 PF16859.5 NODE_47249_length_406_cov_133.892183_g39408_i0reverse_frame_2 - 0.066 13.5 3.0 0.08 13.3 1.9 1.6 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TetR_C_28 PF17937.1 NODE_47249_length_406_cov_133.892183_g39408_i0reverse_frame_2 - 0.11 13.0 5.1 0.096 13.2 3.8 1.5 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Mobilization_B PF17511.2 NODE_47249_length_406_cov_133.892183_g39408_i0forward_frame_2 - 0.14 12.5 0.4 0.16 12.3 0.4 1.2 1 0 0 1 1 1 0 Mobilization protein B VASP_tetra PF08776.11 NODE_47248_length_406_cov_136.380054_g39407_i0forward_frame_3 - 0.31 10.7 8.6 3.3 7.4 1.2 2.3 2 0 0 2 2 2 0 VASP tetramerisation domain UPF0182 PF03699.13 NODE_47241_length_406_cov_204.331536_g39400_i0forward_frame_2 - 0.24 9.5 10.8 0.26 9.3 10.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) ANAPC8 PF04049.13 NODE_47234_length_406_cov_425.180593_g36523_i1reverse_frame_3 - 0.0092 16.0 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 1 Anaphase promoting complex subunit 8 / Cdc23 MPC PF03650.13 NODE_47231_length_406_cov_900.175202_g39391_i0reverse_frame_3 - 1.7e-35 121.5 0.7 2e-35 121.3 0.7 1.1 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers DUF681 PF05080.12 NODE_47225_length_407_cov_1.803763_g39387_i0reverse_frame_2 - 0.018 15.6 0.4 0.025 15.2 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF681) EFP_N PF08207.12 NODE_47222_length_407_cov_1.884409_g39384_i0forward_frame_2 - 0.12 12.5 0.5 0.19 11.7 0.5 1.3 1 0 0 1 1 1 0 Elongation factor P (EF-P) KOW-like domain Diphthamide_syn PF01866.17 NODE_47221_length_407_cov_1.935484_g39383_i0reverse_frame_2 - 3.7e-28 98.8 1.6 4.4e-28 98.6 1.6 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein TcA_RBD PF18518.1 NODE_47214_length_407_cov_2.454301_g39376_i0reverse_frame_2 - 0.054 13.8 1.1 0.067 13.5 1.1 1.1 1 0 0 1 1 1 0 TcA receptor binding domain XRN1_DBM PF18245.1 NODE_47214_length_407_cov_2.454301_g39376_i0forward_frame_2 - 3.5 7.7 6.8 0.44 10.6 2.8 1.5 2 0 0 2 2 2 0 5-3 exonuclease XRN1 DCP1-binding motif DUF481 PF04338.12 NODE_47213_length_407_cov_2.591398_g39375_i0reverse_frame_2 - 1.2e-19 71.2 0.1 1.4e-19 71.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF481 DUF481 PF04338.12 NODE_47212_length_407_cov_2.610215_g39374_i0forward_frame_2 - 1.2e-19 71.2 0.1 1.4e-19 71.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF481 DUF481 PF04338.12 NODE_47211_length_407_cov_2.645161_g39373_i0forward_frame_2 - 2.7e-18 66.8 0.1 3.1e-18 66.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF481 Virul_fac_BrkB PF03631.15 NODE_47207_length_407_cov_2.973118_g39369_i0forward_frame_3 - 4.3e-05 23.2 0.7 5.4e-05 22.9 0.7 1.1 1 0 0 1 1 1 1 Virulence factor BrkB CEP209_CC5 PF16574.5 NODE_47205_length_407_cov_3.040323_g39367_i0forward_frame_2 - 0.015 15.4 0.5 0.026 14.7 0.2 1.5 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 DUF1896 PF08989.10 NODE_47205_length_407_cov_3.040323_g39367_i0forward_frame_2 - 0.09 12.9 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1896) ORC6 PF05460.13 NODE_47204_length_407_cov_3.150538_g39366_i0reverse_frame_3 - 0.15 11.3 1.4 0.17 11.1 1.4 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Cytochrome_C7 PF14522.6 NODE_47200_length_407_cov_3.663978_g39362_i0forward_frame_3 - 0.15 12.1 6.1 0.36 10.9 6.1 1.6 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c Rhodanese_C PF12368.8 NODE_47200_length_407_cov_3.663978_g39362_i0forward_frame_3 - 2.9 8.4 10.3 2.2 8.7 5.1 2.3 1 1 1 2 2 2 0 Rhodanase C-terminal Helicase_C_2 PF13307.6 NODE_47198_length_407_cov_25.569892_g39360_i0reverse_frame_3 - 1.9e-06 28.2 0.0 2.7e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain HBB PF06777.11 NODE_47198_length_407_cov_25.569892_g39360_i0reverse_frame_3 - 0.0037 17.0 0.0 0.0051 16.5 0.0 1.2 1 0 0 1 1 1 1 Helical and beta-bridge domain MRP-S33 PF08293.11 NODE_47196_length_407_cov_56.610215_g39358_i0forward_frame_3 - 0.0082 16.3 1.7 0.013 15.8 1.7 1.4 1 1 0 1 1 1 1 Mitochondrial ribosomal subunit S27 MRAP PF15183.6 NODE_47195_length_407_cov_56.930108_g39357_i0forward_frame_3 - 0.11 12.4 0.4 0.23 11.4 0.4 1.5 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Vezatin PF12632.7 NODE_47195_length_407_cov_56.930108_g39357_i0forward_frame_2 - 0.042 13.2 1.9 0.059 12.7 1.4 1.4 1 1 0 1 1 1 0 Mysoin-binding motif of peroxisomes Cadherin_tail PF15974.5 NODE_47188_length_407_cov_71.153226_g39350_i0forward_frame_3 - 0.045 14.1 1.0 0.067 13.5 1.0 1.4 1 1 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region DUF3644 PF12358.8 NODE_47187_length_407_cov_75.260753_g39349_i0forward_frame_2 - 0.029 14.9 1.2 0.056 13.9 1.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3644) EcsB PF05975.12 NODE_47187_length_407_cov_75.260753_g39349_i0forward_frame_2 - 0.042 12.7 2.8 0.059 12.2 2.6 1.2 1 1 0 1 1 1 0 Bacterial ABC transporter protein EcsB DUF4223 PF13978.6 NODE_47187_length_407_cov_75.260753_g39349_i0forward_frame_2 - 0.058 13.4 0.2 0.11 12.5 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4223) DUF1298 PF06974.13 NODE_47186_length_407_cov_76.139785_g39348_i0reverse_frame_3 - 1.6e-15 57.3 0.0 2.2e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) DUF2062 PF09835.9 NODE_47169_length_407_cov_170.951613_g39332_i0reverse_frame_2 - 0.0078 16.1 0.4 0.0094 15.8 0.4 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) Clat_adaptor_s PF01217.20 NODE_47168_length_407_cov_174.473118_g39331_i0forward_frame_2 - 6.9e-28 97.4 2.4 8.9e-28 97.0 2.4 1.1 1 0 0 1 1 1 1 Clathrin adaptor complex small chain DUF4941 PF16299.5 NODE_47154_length_407_cov_1978.844086_g32039_i1reverse_frame_2 - 0.046 13.0 0.0 0.061 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4941) HEPN_DZIP3 PF18738.1 NODE_47150_length_408_cov_1.455764_g39315_i0forward_frame_2 - 0.17 11.7 0.4 0.17 11.7 0.4 2.1 1 1 1 2 2 2 0 DZIP3/ hRUL138-like HEPN LsmAD PF06741.13 NODE_47147_length_408_cov_1.989276_g39312_i0forward_frame_3 - 0.0027 18.2 0.5 0.004 17.7 0.5 1.3 1 0 0 1 1 1 1 LsmAD domain DUF2268 PF10026.9 NODE_47146_length_408_cov_2.083110_g39311_i0forward_frame_2 - 0.00019 21.1 0.3 0.00021 20.9 0.3 1.2 1 0 0 1 1 1 1 Predicted Zn-dependent protease (DUF2268) ISK_Channel PF02060.15 NODE_47145_length_408_cov_2.128686_g39310_i0forward_frame_2 - 0.14 11.9 0.8 0.56 9.9 0.1 1.9 2 0 0 2 2 2 0 Slow voltage-gated potassium channel Dppa2_A PF14049.6 NODE_47143_length_408_cov_2.230563_g39308_i0forward_frame_2 - 0.024 14.7 1.1 0.039 14.1 1.1 1.3 1 1 0 1 1 1 0 Dppa2/4 conserved region in higher vertebrates PRIMA1 PF16101.5 NODE_47141_length_408_cov_2.329759_g39306_i0reverse_frame_2 - 0.042 13.9 1.0 0.063 13.3 1.0 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 TRIQK PF15168.6 NODE_47138_length_408_cov_2.554960_g39303_i0reverse_frame_3 - 0.061 13.2 0.1 0.061 13.2 0.1 1.7 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family NAF PF03822.14 NODE_47138_length_408_cov_2.554960_g39303_i0forward_frame_3 - 0.07 13.3 0.6 0.15 12.3 0.6 1.5 1 0 0 1 1 1 0 NAF domain Glycophorin_A PF01102.18 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 1.2e-05 25.5 0.4 1.7e-05 25.1 0.4 1.4 1 1 0 1 1 1 1 Glycophorin A TMEM154 PF15102.6 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.00013 21.9 4.0 0.00026 20.9 4.0 1.6 1 1 0 1 1 1 1 TMEM154 protein family Epiglycanin_C PF14654.6 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.00095 19.2 0.1 0.0017 18.4 0.1 1.4 1 0 0 1 1 1 1 Mucin, catalytic, TM and cytoplasmic tail region CD34_antigen PF06365.12 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.0075 15.9 0.0 0.0083 15.7 0.0 1.2 1 0 0 1 1 1 1 CD34/Podocalyxin family Shisa PF13908.6 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.012 15.8 1.1 0.019 15.2 1.1 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Protocadherin PF08374.11 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.013 15.5 0.1 0.017 15.1 0.1 1.2 1 0 0 1 1 1 0 Protocadherin Ninjurin PF04923.12 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.018 14.9 0.0 0.026 14.4 0.0 1.4 1 0 0 1 1 1 0 Ninjurin Rax2 PF12768.7 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.022 14.2 0.0 0.026 14.0 0.0 1.2 1 0 0 1 1 1 0 Cortical protein marker for cell polarity DUF5305 PF17231.2 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.023 14.1 2.6 0.046 13.1 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5305) EssA PF10661.9 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.032 14.1 0.7 0.067 13.0 0.7 1.5 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA DHHC PF01529.20 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.041 14.0 0.4 0.049 13.7 0.4 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase Sigma_reg_N PF13800.6 NODE_47137_length_408_cov_2.635389_g39302_i0reverse_frame_2 - 0.11 12.8 0.7 0.3 11.4 0.1 1.8 2 0 0 2 2 2 0 Sigma factor regulator N-terminal PV_NSP1 PF12433.8 NODE_47135_length_408_cov_3.493298_g39300_i0forward_frame_3 - 0.23 11.8 0.0 0.34 11.3 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein 1 Thioredoxin_8 PF13905.6 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 9.3e-13 48.3 0.1 1.2e-12 47.9 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.21 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 5.3e-10 39.3 0.0 7e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 1.2e-05 25.1 0.0 1.4e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Redoxin Thioredoxin PF00085.20 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 2e-05 24.5 0.0 0.0003 20.7 0.0 2.0 1 1 1 2 2 2 1 Thioredoxin Thioredoxin_2 PF13098.6 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 0.0071 16.8 0.0 0.017 15.6 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Cas_Csn2 PF09711.10 NODE_47131_length_408_cov_5.788204_g39296_i0reverse_frame_3 - 0.0021 17.7 0.4 0.0025 17.5 0.4 1.2 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csn2) Arteri_Gl PF00951.18 NODE_47131_length_408_cov_5.788204_g39296_i0forward_frame_2 - 0.1 12.4 4.9 0.14 12.0 4.9 1.3 1 1 0 1 1 1 0 Arterivirus GL envelope glycoprotein Baculo_11_kDa PF06143.11 NODE_47131_length_408_cov_5.788204_g39296_i0forward_frame_2 - 1.9 8.1 12.3 0.079 12.5 6.5 1.6 2 0 0 2 2 2 0 Baculovirus 11 kDa family A_deaminase PF00962.22 NODE_47129_length_408_cov_33.962466_g39294_i0forward_frame_2 - 4.9e-19 68.8 0.0 5.4e-19 68.7 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase Ndc1_Nup PF09531.10 NODE_47125_length_408_cov_53.343164_g39290_i0reverse_frame_3 - 1.8 7.2 10.2 2.1 7.0 10.2 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup ThrE PF06738.12 NODE_47125_length_408_cov_53.343164_g39290_i0reverse_frame_2 - 0.28 10.5 2.1 0.33 10.3 2.1 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter Yae1_N PF09811.9 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.0049 16.5 25.3 0.71 9.6 13.2 4.0 3 1 0 3 3 3 2 Essential protein Yae1, N terminal Presenilin PF01080.17 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.058 12.1 5.7 0.059 12.1 5.7 1.1 1 0 0 1 1 1 0 Presenilin DUF1467 PF07330.12 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.064 13.2 0.3 0.5 10.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1467) Zip PF02535.22 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.37 9.9 1.5 0.42 9.8 1.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter NPR3 PF03666.13 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.57 8.9 16.5 0.67 8.7 16.5 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 V_ATPase_I PF01496.19 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 2.9 5.7 3.9 3.1 5.6 3.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Yae1_N PF09811.9 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_2 - 0.021 14.5 29.5 0.45 10.3 0.6 5.0 2 1 0 3 3 3 0 Essential protein Yae1, N terminal DUF2201_N PF13203.6 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_2 - 0.6 9.7 7.0 0.65 9.5 7.0 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain BSD PF03909.17 NODE_47124_length_408_cov_60.069705_g39289_i0reverse_frame_2 - 0.043 13.8 0.1 0.14 12.2 0.0 1.9 2 1 0 2 2 2 0 BSD domain LEF-9 PF05094.12 NODE_47115_length_408_cov_82.252011_g39280_i0reverse_frame_3 - 0.022 13.3 0.1 0.026 13.1 0.1 1.1 1 0 0 1 1 1 0 Late expression factor 9 (LEF-9) Porin_6 PF16939.5 NODE_47114_length_408_cov_82.356568_g39279_i0forward_frame_2 - 0.2 10.7 3.5 0.34 9.9 3.5 1.4 1 1 0 1 1 1 0 Putative porin KH_1 PF00013.29 NODE_47109_length_408_cov_110.040214_g39274_i0forward_frame_3 - 0.00026 20.8 0.0 0.00039 20.2 0.0 1.3 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 NODE_47109_length_408_cov_110.040214_g39274_i0forward_frame_3 - 0.078 12.8 0.4 0.14 12.0 0.4 1.4 1 0 0 1 1 1 0 KH domain DUF2809 PF10990.8 NODE_47108_length_408_cov_111.501340_g39273_i0reverse_frame_2 - 0.033 14.8 0.0 0.052 14.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2809) ING PF12998.7 NODE_47108_length_408_cov_111.501340_g39273_i0forward_frame_3 - 0.045 14.3 0.1 0.11 13.1 0.1 1.6 2 0 0 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding Peptidase_C37 PF05416.12 NODE_47107_length_408_cov_115.361930_g39272_i0forward_frame_3 - 0.27 9.7 3.2 0.27 9.7 3.2 1.1 1 0 0 1 1 1 0 Southampton virus-type processing peptidase WBS_methylT PF12589.8 NODE_47096_length_408_cov_135.120643_g39261_i0forward_frame_3 - 0.47 11.2 4.8 0.84 10.4 4.8 1.4 1 0 0 1 1 1 0 Methyltransferase involved in Williams-Beuren syndrome Band_3_cyto PF07565.13 NODE_47096_length_408_cov_135.120643_g39261_i0forward_frame_2 - 0.038 13.8 0.5 0.046 13.5 0.5 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain CwfJ_C_1 PF04677.15 NODE_47094_length_408_cov_138.013405_g39259_i0reverse_frame_2 - 0.06 13.2 0.1 0.081 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 Fer4_8 PF13183.6 NODE_47093_length_408_cov_146.769437_g39258_i0reverse_frame_2 - 0.22 12.0 3.5 0.19 12.2 1.2 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain Mating_C PF12737.7 NODE_47089_length_408_cov_170.747989_g39254_i0reverse_frame_3 - 0.001 18.4 4.9 0.33 10.1 0.7 2.8 1 1 2 3 3 3 2 C-terminal domain of homeodomain 1 Penaeidin PF05927.11 NODE_47089_length_408_cov_170.747989_g39254_i0reverse_frame_3 - 3.4 8.5 21.5 1.7 9.4 0.4 3.4 2 1 1 3 3 3 0 Penaeidin B277 PF17623.2 NODE_47089_length_408_cov_170.747989_g39254_i0reverse_frame_2 - 0.15 11.1 0.5 0.22 10.5 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function Tai4 PF16695.5 NODE_47089_length_408_cov_170.747989_g39254_i0reverse_frame_2 - 2 9.0 3.6 59 4.3 0.0 3.1 2 1 1 3 3 3 0 Type VI secretion system (T6SS), amidase immunity protein RCC1_2 PF13540.6 NODE_47089_length_408_cov_170.747989_g39254_i0forward_frame_3 - 7.8e-09 35.1 1.9 0.018 14.8 0.1 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 NODE_47089_length_408_cov_170.747989_g39254_i0forward_frame_3 - 1.3e-05 25.5 0.8 0.37 11.1 0.0 3.3 2 1 2 4 4 4 2 TFIIH p62 subunit, N-terminal domain NPV_P10 PF05531.12 NODE_47089_length_408_cov_170.747989_g39254_i0forward_frame_3 - 0.006 17.0 0.1 33 5.1 0.0 3.0 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein GST_C_2 PF13410.6 NODE_47089_length_408_cov_170.747989_g39254_i0forward_frame_3 - 0.048 13.7 0.2 15 5.7 0.0 3.0 2 1 0 2 2 2 0 Glutathione S-transferase, C-terminal domain bPH_2 PF03703.14 NODE_47089_length_408_cov_170.747989_g39254_i0forward_frame_3 - 0.11 12.7 0.1 1.5 9.1 0.0 2.3 1 1 2 3 3 3 0 Bacterial PH domain RCC1 PF00415.18 NODE_47089_length_408_cov_170.747989_g39254_i0forward_frame_3 - 8.6 7.1 18.2 8.3 7.1 0.9 4.2 5 0 0 5 5 5 0 Regulator of chromosome condensation (RCC1) repeat HTH_29 PF13551.6 NODE_47089_length_408_cov_170.747989_g39254_i0forward_frame_2 - 0.16 12.1 3.0 11 6.1 0.1 2.7 3 0 0 3 3 3 0 Winged helix-turn helix SKI PF01202.22 NODE_47085_length_408_cov_222.691689_g39250_i0reverse_frame_3 - 0.022 14.9 0.0 0.03 14.5 0.0 1.1 1 0 0 1 1 1 0 Shikimate kinase Vps26 PF03643.15 NODE_47078_length_408_cov_472.683646_g39243_i0reverse_frame_3 - 5.8e-51 173.1 0.6 6.7e-51 172.9 0.6 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 26 Ribosomal_L39 PF00832.20 NODE_47078_length_408_cov_472.683646_g39243_i0reverse_frame_2 - 0.5 10.0 6.0 4.6 7.0 2.7 2.7 2 0 0 2 2 2 0 Ribosomal L39 protein ETRAMP PF09716.10 NODE_47072_length_408_cov_9466.187668_g39237_i0forward_frame_3 - 0.14 12.2 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) zf-met PF12874.7 NODE_47071_length_408_cov_14615.278820_g39236_i0forward_frame_3 - 0.39 11.2 2.1 13 6.4 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Ribosomal_S24e PF01282.19 ORF99814 - 3.2e-26 91.1 0.3 3.2e-26 91.1 0.3 2.0 1 1 1 2 2 2 1 Ribosomal protein S24e Surp PF01805.20 ORF99116 - 0.075 13.0 0.5 0.18 11.9 0.5 1.7 1 1 0 1 1 1 0 Surp module CBM_3 PF00942.18 ORF99116 - 0.088 13.2 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 Cellulose binding domain DUF1768 PF08719.11 ORF99072 - 6.1e-09 36.3 0.0 7.3e-09 36.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) Ras PF00071.22 ORF98278 - 0.00024 20.7 0.1 0.0021 17.7 0.0 2.0 2 0 0 2 2 2 1 Ras family Ku_C PF03730.14 ORF96275 - 0.022 15.4 3.1 0.043 14.5 3.1 1.4 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm bPH_3 PF14470.6 ORF96275 - 0.023 15.1 0.2 0.042 14.2 0.2 1.5 1 0 0 1 1 1 0 Bacterial PH domain RITA PF17066.5 ORF95823 - 0.31 10.6 2.1 11 5.5 0.1 2.1 2 0 0 2 2 2 0 RBPJ-interacting and tubulin associated protein EPL1 PF10513.9 ORF95245 - 0.2 12.1 8.3 0.23 11.8 8.3 1.2 1 0 0 1 1 1 0 Enhancer of polycomb-like Zip PF02535.22 ORF95245 - 5 6.3 25.1 5.5 6.1 25.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF95245 - 6 5.5 8.1 6.6 5.4 8.1 1.1 1 0 0 1 1 1 0 Presenilin Otopetrin PF03189.13 ORF95245 - 6.7 5.4 9.6 7 5.3 9.6 1.1 1 0 0 1 1 1 0 Otopetrin CLN3 PF02487.17 ORF95245 - 8 5.4 5.8 9.4 5.2 5.8 1.1 1 0 0 1 1 1 0 CLN3 protein ALMT PF11744.8 ORF95245 - 9 5.0 9.5 9.8 4.9 9.5 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF863 PF05904.11 ORF95245 - 9.9 4.5 17.5 12 4.2 17.5 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) DUF3810 PF12725.7 ORF95020 - 0.042 13.2 0.2 0.051 12.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) GnsAB_toxin PF08178.11 ORF95020 - 0.072 13.0 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system OAD_gamma PF04277.13 ORF95020 - 0.1 13.2 0.0 0.2 12.2 0.0 1.5 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain DUF1899 PF08953.11 ORF9436 - 3.7e-10 39.5 0.0 5.8e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1899) WD40 PF00400.32 ORF9436 - 9.5e-05 23.1 1.3 0.00023 21.9 0.1 2.2 3 0 0 3 3 3 1 WD domain, G-beta repeat DUF693 PF05113.13 ORF9436 - 0.0027 17.0 0.1 0.0035 16.6 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF693) DmsC PF04976.12 ORF94244 - 2.7e-41 141.9 3.5 3e-41 141.7 3.5 1.0 1 0 0 1 1 1 1 DMSO reductase anchor subunit (DmsC) Anti-adapt_IraP PF10796.9 ORF94244 - 0.055 14.0 0.0 0.075 13.6 0.0 1.2 1 0 0 1 1 1 0 Sigma-S stabilisation anti-adaptor protein DUF2357 PF09823.9 ORF94082 - 0.006 15.9 1.4 0.0072 15.6 1.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2357) TcdB_N PF12918.7 ORF94082 - 5.8 7.3 12.0 7.6 6.9 0.7 2.9 3 1 0 3 3 3 0 TcdB toxin N-terminal helical domain GBP_C PF02841.14 ORF93465 - 0.04 13.3 0.2 0.046 13.1 0.2 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain HGTP_anticodon2 PF12745.7 ORF93307 - 0.0054 16.3 3.7 0.0061 16.1 3.7 1.0 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs RE_HaeII PF09554.10 ORF93307 - 0.0088 15.3 0.6 0.01 15.1 0.6 1.1 1 0 0 1 1 1 1 HaeII restriction endonuclease PDZ_1 PF12812.7 ORF93307 - 0.086 12.9 0.4 0.2 11.7 0.1 1.8 2 0 0 2 2 2 0 PDZ-like domain Mating_C PF12737.7 ORF91755 - 0.67 9.1 4.6 0.75 9.0 4.6 1.1 1 0 0 1 1 1 0 C-terminal domain of homeodomain 1 GH3 PF03321.13 ORF91397 - 0.0046 15.9 0.0 0.005 15.8 0.0 1.1 1 0 0 1 1 1 1 GH3 auxin-responsive promoter Topoisom_bac PF01131.20 ORF91331 - 1.2e-23 83.8 0.0 1.4e-23 83.6 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase RNase_H2_suC PF08615.11 ORF91152 - 0.0012 19.0 0.2 0.0016 18.6 0.2 1.3 1 0 0 1 1 1 1 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) FANCI_HD1 PF14679.6 ORF90793 - 0.041 13.8 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 FANCI helical domain 1 zf-Di19 PF05605.12 ORF90572 - 0.02 15.2 0.5 0.028 14.7 0.5 1.2 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding HAT PF02184.16 ORF90572 - 0.21 11.6 0.0 0.33 11.0 0.0 1.3 1 0 0 1 1 1 0 HAT (Half-A-TPR) repeat RPAP1_N PF08621.10 ORF89452 - 0.16 11.8 0.1 0.27 11.0 0.1 1.3 1 0 0 1 1 1 0 RPAP1-like, N-terminal Rhodanese PF00581.20 ORF88535 - 3.5e-05 24.3 0.0 4.2e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain MAAL_N PF05034.13 ORF88535 - 0.081 12.6 0.0 0.094 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus RICTOR_V PF14668.6 ORF87032 - 0.096 12.9 0.0 0.16 12.3 0.0 1.3 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, domain 5 DUF2238 PF09997.9 ORF84050 - 0.086 12.6 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2238) zf-MYND PF01753.18 ORF82871 - 1.3e-09 37.9 15.3 1.3e-09 37.9 15.3 1.5 2 0 0 2 2 2 1 MYND finger zf-HIT PF04438.16 ORF82871 - 0.00033 20.5 10.1 0.00057 19.7 10.1 1.4 1 0 0 1 1 1 1 HIT zinc finger zf-C6H2 PF15801.5 ORF82871 - 0.51 10.7 13.6 0.47 10.8 11.7 1.8 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding MORN PF02493.20 ORF82122 - 1e-05 25.1 6.8 0.35 10.9 0.4 4.2 4 0 0 4 4 4 3 MORN repeat DUF4174 PF13778.6 ORF82055 - 0.15 12.5 0.0 0.21 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4174) EamA PF00892.20 ORF81737 - 5.1e-10 39.7 4.7 6.3e-10 39.4 4.7 1.0 1 0 0 1 1 1 1 EamA-like transporter family zf-CSL PF05207.13 ORF79817 - 0.018 14.7 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 CSL zinc finger HALZ PF02183.18 ORF78676 - 0.025 14.8 0.8 0.025 14.8 0.8 3.3 2 1 1 3 3 3 0 Homeobox associated leucine zipper DUF2433 PF10360.9 ORF78676 - 0.03 14.4 1.0 0.03 14.4 1.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2433) DUF4047 PF13256.6 ORF78676 - 0.079 13.2 9.8 0.044 14.0 7.9 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) GLE1 PF07817.13 ORF78676 - 0.18 11.0 4.7 0.21 10.8 4.7 1.2 1 0 0 1 1 1 0 GLE1-like protein DUF1664 PF07889.12 ORF78676 - 0.21 11.6 4.4 0.27 11.3 3.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Med30 PF11315.8 ORF78676 - 0.29 11.3 8.5 0.52 10.5 8.5 1.7 1 1 0 1 1 1 0 Mediator complex subunit 30 DNA_pol_delta_4 PF04081.13 ORF78676 - 0.56 10.5 9.2 1 9.7 9.2 1.4 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 YabA PF06156.13 ORF78676 - 1.5 9.5 13.4 0.089 13.4 4.9 2.4 1 1 1 2 2 2 0 Initiation control protein YabA DUF4337 PF14235.6 ORF78676 - 2.2 8.4 8.8 2.7 8.1 8.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) PRP1_N PF06424.12 ORF78676 - 7.2 7.0 12.9 0.71 10.3 6.7 2.0 1 1 1 2 2 2 0 PRP1 splicing factor, N-terminal Nuc_N PF14448.6 ORF78530 - 0.064 13.1 0.7 0.11 12.4 0.0 1.7 2 0 0 2 2 2 0 Nuclease N terminal Phytochelatin PF05023.14 ORF78379 - 0.025 13.8 0.0 0.031 13.5 0.0 1.1 1 0 0 1 1 1 0 Phytochelatin synthase DUF455 PF04305.14 ORF78379 - 0.099 12.2 0.1 0.18 11.3 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF455) DUF5301 PF17225.3 ORF78037 - 0.08 13.4 5.9 0.092 13.2 4.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF5300) PolC_DP2 PF03833.13 ORF77175 - 0.25 9.2 0.0 0.26 9.1 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Cytochrome_B PF00033.19 ORF76466 - 8.1e-33 113.8 9.1 9.1e-33 113.7 9.1 1.0 1 0 0 1 1 1 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 ORF76466 - 8.9e-11 42.1 1.9 8.9e-11 42.1 1.9 1.8 2 0 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB MRVI1 PF05781.12 ORF76466 - 0.38 9.4 0.0 0.46 9.1 0.0 1.1 1 0 0 1 1 1 0 MRVI1 protein DUF4405 PF14358.6 ORF76466 - 5 7.7 11.7 0.21 12.2 5.7 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) PsbI PF02532.14 ORF76252 - 0.13 12.2 0.3 1.8 8.6 0.0 2.3 2 0 0 2 2 2 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) BPD_transp_1 PF00528.22 ORF75586 - 1.6e-35 122.5 8.5 1.8e-35 122.4 8.5 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DUF2828 PF11443.8 ORF73084 - 0.011 13.9 0.1 0.011 13.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) Ras PF00071.22 ORF72647 - 5.3e-27 94.4 0.0 5.9e-27 94.2 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF72647 - 1.1e-07 32.1 0.0 1.9e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF72647 - 4.7e-06 26.2 0.0 6e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF72647 - 0.011 15.3 0.1 0.017 14.7 0.1 1.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain Asp_Arg_Hydrox PF05118.15 ORF71787 - 3.9e-28 98.3 0.0 4.7e-28 98.0 0.0 1.1 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase Cupin_2 PF07883.11 ORF71787 - 0.0052 16.5 0.0 0.013 15.1 0.0 1.9 1 1 0 1 1 1 1 Cupin domain Rft-1 PF04506.13 ORF70398 - 2e-12 46.6 3.0 2.3e-12 46.4 3.0 1.0 1 0 0 1 1 1 1 Rft protein Alanine_zipper PF11839.8 ORF69870 - 0.058 13.8 25.6 0.36 11.2 18.6 2.4 2 1 0 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein V_ATPase_I PF01496.19 ORF69870 - 0.14 10.0 7.6 0.17 9.8 7.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fmp27_WPPW PF10359.9 ORF69870 - 0.37 9.6 7.9 0.47 9.2 7.9 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain LCD1 PF09798.9 ORF69870 - 1.7 7.1 5.4 1.6 7.2 5.4 1.1 1 0 0 1 1 1 0 DNA damage checkpoint protein ERM PF00769.19 ORF69870 - 3.3 7.4 32.1 4.4 7.1 32.1 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Exonuc_VII_L PF02601.15 ORF69870 - 4.6 6.7 11.3 5.8 6.4 11.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit YjbH PF06082.11 ORF69870 - 5.9 5.6 8.9 6.9 5.4 8.9 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH HMG_box PF00505.19 ORF69278 - 1.1e-11 44.9 4.0 1.1e-11 44.9 4.0 1.8 1 1 1 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF69278 - 4.3e-07 30.4 3.0 4.3e-07 30.4 3.0 1.8 1 1 0 1 1 1 1 HMG-box domain DUF724 PF05266.14 ORF68936 - 0.069 13.0 7.1 0.022 14.6 2.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Angiomotin_C PF12240.8 ORF68936 - 0.26 10.8 5.3 0.19 11.3 2.5 2.0 1 1 1 2 2 2 0 Angiomotin C terminal AAA_lid_3 PF17862.1 ORF68902 - 4.5e-10 39.2 0.1 8.2e-10 38.3 0.1 1.4 1 0 0 1 1 1 1 AAA+ lid domain AAA PF00004.29 ORF68902 - 2.3e-09 37.8 0.0 1e-08 35.7 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) TGF_beta_GS PF08515.12 ORF6805 - 0.085 12.4 0.2 0.16 11.5 0.2 1.4 1 0 0 1 1 1 0 Transforming growth factor beta type I GS-motif DUF1340 PF07067.11 ORF67613 - 0.0038 16.6 0.8 0.0042 16.5 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1340) TERB2 PF15101.6 ORF67613 - 0.22 11.6 4.0 0.2 11.7 3.2 1.4 1 1 0 1 1 1 0 Telomere-associated protein TERB2 FlaC_arch PF05377.11 ORF67613 - 1.3 9.5 9.1 0.58 10.6 1.3 3.2 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF16 PF01519.16 ORF67613 - 6.5 7.3 12.1 21 5.7 12.1 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 Erp_C PF06780.11 ORF6758 - 0.37 10.8 6.2 0.27 11.2 0.3 2.1 1 1 1 2 2 2 0 Erp protein C-terminus DUF1729 PF08354.10 ORF67379 - 0.066 12.1 0.1 0.16 10.9 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1729) Syntaxin PF00804.25 ORF65373 - 0.0011 18.7 0.4 0.0015 18.3 0.4 1.2 1 0 0 1 1 1 1 Syntaxin BLOC1_2 PF10046.9 ORF65373 - 0.0025 18.1 3.0 0.005 17.1 3.0 1.4 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 NPV_P10 PF05531.12 ORF65373 - 0.0061 17.0 2.8 0.062 13.8 2.2 2.1 2 0 0 2 2 2 1 Nucleopolyhedrovirus P10 protein DASH_Dad3 PF08656.10 ORF65373 - 0.011 15.8 0.4 0.023 14.7 0.4 1.6 1 0 0 1 1 1 0 DASH complex subunit Dad3 DUF4735 PF15882.5 ORF65373 - 0.02 14.3 1.2 0.029 13.8 1.0 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4735) IQCJ-SCHIP1 PF15157.6 ORF65373 - 0.026 14.4 2.1 2.8 7.8 0.1 2.1 1 1 1 2 2 2 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif DUF2730 PF10805.8 ORF65373 - 0.028 14.5 0.5 0.1 12.7 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) DUF4279 PF14106.6 ORF65373 - 0.095 12.9 0.5 3 8.1 0.2 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4279) Matrilin_ccoil PF10393.9 ORF65373 - 0.11 12.4 0.8 0.52 10.2 0.3 2.2 1 1 1 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin Latarcin PF10279.9 ORF65373 - 0.17 12.3 2.1 5.5 7.5 2.1 2.5 1 1 0 1 1 1 0 Latarcin precursor Josephin PF02099.17 ORF64861 - 1e-12 48.5 0.0 2.8e-11 43.8 0.0 2.1 1 1 0 1 1 1 1 Josephin Peptidase_C12 PF01088.21 ORF64861 - 0.0013 18.5 0.0 0.0013 18.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 ENTH PF01417.20 ORF64275 - 0.065 13.3 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 ENTH domain Form-deh_trans PF09163.11 ORF62614 - 1.6 8.6 4.8 1 9.2 0.7 2.3 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane DUF1375 PF07119.12 ORF61911 - 1.3e-07 31.9 0.3 2.4e-07 31.0 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1375) zinc_ribbon_9 PF14369.6 ORF6148 - 6.1 7.2 6.6 0.88 9.9 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon DUF2572 PF10833.8 ORF60518 - 0.054 13.2 1.4 0.07 12.9 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2572) Proteasome PF00227.26 ORF59877 - 6.1e-29 100.9 0.0 6.9e-29 100.7 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit zf-Di19 PF05605.12 ORF5985 - 0.02 15.2 0.5 0.028 14.7 0.5 1.2 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding HAT PF02184.16 ORF5985 - 0.21 11.6 0.0 0.33 11.0 0.0 1.3 1 0 0 1 1 1 0 HAT (Half-A-TPR) repeat SHOCT PF09851.9 ORF59260 - 3.6e-08 32.9 0.3 9.5e-08 31.6 0.3 1.8 1 0 0 1 1 1 1 Short C-terminal domain CSTF2_hinge PF14327.6 ORF59229 - 1.2e-06 28.9 3.5 1.6e-06 28.4 0.1 2.5 2 1 0 2 2 2 1 Hinge domain of cleavage stimulation factor subunit 2 CSTF_C PF14304.6 ORF59229 - 0.0017 17.9 3.9 0.0036 16.9 3.9 1.6 1 0 0 1 1 1 1 Transcription termination and cleavage factor C-terminal Rrp40_N PF18311.1 ORF59229 - 0.016 15.1 0.3 0.033 14.1 0.3 1.6 1 0 0 1 1 1 0 Exosome complex exonuclease Rrp40 N-terminal domain TFIIE_beta PF02186.15 ORF59229 - 0.038 14.3 1.1 0.62 10.4 0.0 3.0 3 1 0 3 3 3 0 TFIIE beta subunit core domain RBM39linker PF15519.6 ORF59229 - 0.11 13.6 2.8 0.12 13.4 0.3 2.2 1 1 1 2 2 2 0 linker between RRM2 and RRM3 domains in RBM39 protein Tom5 PF10642.9 ORF59229 - 3.4 7.8 8.3 1 9.5 0.2 2.5 2 0 0 2 2 2 0 Mitochondrial import receptor subunit or translocase Ras PF00071.22 ORF58469 - 2.3e-14 53.3 0.0 2.5e-14 53.2 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF58469 - 3.6e-05 24.0 0.0 4.7e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF58469 - 0.00031 20.2 0.0 0.00035 20.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family DUF4380 PF14315.6 ORF58250 - 3 6.7 8.5 3.5 6.5 6.7 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4380) NiFeSe_Hases PF00374.19 ORF56957 - 0.072 12.0 0.0 0.098 11.5 0.0 1.1 1 0 0 1 1 1 0 Nickel-dependent hydrogenase Xpo1 PF08389.12 ORF55775 - 0.036 14.1 1.9 2.3 8.3 0.2 2.3 2 1 0 2 2 2 0 Exportin 1-like protein HBD PF18534.1 ORF55775 - 0.056 13.6 0.3 0.38 10.9 0.1 2.2 1 1 1 2 2 2 0 Helical bundle domain IGFBP PF00219.18 ORF55483 - 0.036 14.7 1.6 0.036 14.7 1.6 1.8 1 1 0 1 1 1 0 Insulin-like growth factor binding protein TPK_B1_binding PF04265.14 ORF55483 - 0.082 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain HSL_N PF06350.12 ORF54951 - 0.013 14.5 0.1 0.015 14.2 0.1 1.1 1 0 0 1 1 1 0 Hormone-sensitive lipase (HSL) N-terminus DUF1934 PF09148.10 ORF54951 - 0.016 15.2 0.6 0.023 14.7 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1934) TMEM135_C_rich PF15982.5 ORF54951 - 0.054 14.1 0.6 0.11 13.1 0.4 1.7 2 0 0 2 2 2 0 N-terminal cysteine-rich region of Transmembrane protein 135 DUF910 PF06014.11 ORF54951 - 0.074 13.1 0.4 0.12 12.4 0.4 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF910) DUF2572 PF10833.8 ORF54555 - 0.054 13.2 1.4 0.07 12.9 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2572) TPK_B1_binding PF04265.14 ORF54174 - 0.04 13.6 0.5 0.63 9.8 0.1 2.2 2 0 0 2 2 2 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Noelin-1 PF12308.8 ORF54174 - 0.42 10.6 5.3 0.75 9.8 2.0 2.1 2 0 0 2 2 2 0 Neurogenesis glycoprotein AIP3 PF03915.13 ORF53597 - 0.024 13.8 0.1 0.025 13.7 0.1 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 UPF0172 PF03665.13 ORF53597 - 0.043 13.9 0.4 0.051 13.6 0.4 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) FAP PF07174.11 ORF52510 - 0.5 9.8 9.2 0.61 9.5 9.2 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Glyco_transf_90 PF05686.12 ORF51092 - 1.3e-14 54.0 0.0 1.4e-14 53.9 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 90 SNF PF00209.18 ORF49764 - 2.6e-29 102.3 15.2 3e-29 102.1 15.2 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF5385 PF17359.2 ORF49764 - 0.16 11.5 0.1 0.16 11.5 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5385) CHZ PF09649.10 ORF49598 - 1.9 8.0 4.6 3.4 7.2 4.6 1.4 1 0 0 1 1 1 0 Histone chaperone domain CHZ Rhodanese PF00581.20 ORF49571 - 2.6e-05 24.7 0.0 3.2e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain MAAL_N PF05034.13 ORF49571 - 0.076 12.6 0.0 0.089 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus Cys_rich_CWC PF14375.6 ORF49348 - 0.022 15.1 1.8 0.045 14.2 1.8 1.6 1 0 0 1 1 1 0 Cysteine-rich CWC LAT2 PF15703.5 ORF48669 - 0.18 11.7 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells family member 2 DUF1499 PF07386.11 ORF48638 - 0.0069 16.9 0.0 0.0083 16.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) U-box PF04564.15 ORF48366 - 2.5e-17 62.8 0.6 7.4e-17 61.3 0.1 1.8 2 0 0 2 2 2 1 U-box domain UIM PF02809.20 ORF48366 - 0.00013 21.6 0.5 0.00013 21.6 0.5 2.2 2 0 0 2 2 2 1 Ubiquitin interaction motif Trm112p PF03966.16 ORF46971 - 5e-12 46.2 0.0 6.3e-11 42.7 0.0 2.1 1 1 0 1 1 1 1 Trm112p-like protein Pkinase PF00069.25 ORF46899 - 1.2e-14 54.3 0.0 1.4e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46899 - 0.0017 17.7 0.0 0.002 17.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF46899 - 0.16 11.3 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like DUF2357 PF09823.9 ORF45925 - 0.006 15.9 1.4 0.0072 15.6 1.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2357) TcdB_N PF12918.7 ORF45925 - 5.8 7.3 12.0 7.6 6.9 0.7 2.9 3 1 0 3 3 3 0 TcdB toxin N-terminal helical domain UQ_con PF00179.26 ORF45227 - 6.9e-33 113.2 0.0 7.8e-33 113.1 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Sugar_tr PF00083.24 ORF43666 - 1.6e-09 37.2 5.7 1.9e-09 36.9 5.7 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MTABC_N PF16185.5 ORF43666 - 0.0021 17.6 0.8 0.0023 17.5 0.8 1.0 1 0 0 1 1 1 1 Mitochondrial ABC-transporter N-terminal five TM region Srg PF02118.21 ORF43666 - 0.005 16.6 2.9 0.0061 16.3 2.9 1.1 1 0 0 1 1 1 1 Srg family chemoreceptor Ni_hydr_CYTB PF01292.20 ORF43666 - 0.04 13.5 0.0 0.062 12.9 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 POM121 PF15229.6 ORF43611 - 0.11 12.2 2.0 0.11 12.1 2.0 1.1 1 0 0 1 1 1 0 POM121 family DUF4596 PF15363.6 ORF43611 - 0.14 12.4 2.0 0.21 11.9 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4596) DUF1729 PF08354.10 ORF42958 - 0.066 12.1 0.1 0.16 10.9 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1729) Ribosomal_L26 PF16906.5 ORF42943 - 2.1e-31 108.2 0.9 2.4e-31 108.0 0.9 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 ORF42943 - 9.5e-06 25.4 0.3 2.2e-05 24.2 0.3 1.6 1 0 0 1 1 1 1 KOW motif # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks169.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks169.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks169.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks169.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Methyltransf_25 PF13649.6 ORF88773 - 5.9e-08 33.3 0.0 5.5e-05 23.8 0.0 2.4 2 0 0 2 2 2 2 Methyltransferase domain PRMT5_C PF17286.2 ORF88773 - 1.1e-07 31.9 0.1 2e-07 31.1 0.1 1.4 1 0 0 1 1 1 1 PRMT5 oligomerisation domain PrmA PF06325.13 ORF88773 - 9.9e-06 25.2 0.4 2.6e-05 23.8 0.1 1.6 1 1 1 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 ORF88773 - 1.1e-05 25.9 0.0 0.0029 18.2 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain PRMT5 PF05185.16 ORF88773 - 2.1e-05 24.5 0.0 3.2e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase MTS PF05175.14 ORF88773 - 0.00037 20.1 0.0 0.00065 19.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 ORF88773 - 0.011 15.4 0.1 0.026 14.2 0.1 1.6 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 ORF88773 - 0.034 14.0 0.0 0.097 12.5 0.0 1.8 2 1 0 2 2 2 0 Methyltransferase domain Ion_trans PF00520.31 ORF8491 - 1.4e-30 106.4 17.2 1.8e-30 106.0 17.2 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF8491 - 2.3e-06 27.9 0.1 7.2e-06 26.4 0.1 1.9 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF8491 - 3.9e-06 26.4 1.5 0.0093 15.8 0.3 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF8491 - 0.00016 21.0 1.3 0.073 12.6 0.4 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF8491 - 0.00045 20.0 0.1 0.001 18.9 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair DUF4844 PF16133.5 ORF8491 - 0.085 13.4 0.1 4.4 7.9 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4844) PKD_channel PF08016.12 ORF8491 - 0.095 11.4 15.5 0.97 8.0 7.6 2.4 2 0 0 2 2 2 0 Polycystin cation channel Ninjurin PF04923.12 ORF8491 - 0.25 11.3 2.8 9.2 6.3 0.1 3.1 3 1 0 3 3 3 0 Ninjurin UQ_con PF00179.26 ORF84865 - 2.2e-37 127.9 0.0 3.6e-37 127.1 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme VWA_2 PF13519.6 ORF84865 - 8.2e-10 39.3 0.0 2e-09 38.0 0.0 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF84865 - 1.5e-09 38.3 0.0 6.9e-09 36.2 0.0 1.9 1 1 0 1 1 1 1 von Willebrand factor type A domain Prok-E2_B PF14461.6 ORF84865 - 0.00024 20.8 0.0 0.00045 19.9 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 ORF84865 - 0.13 12.1 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 UEV domain RWD PF05773.22 ORF84865 - 0.19 12.0 0.0 0.49 10.7 0.0 1.6 2 0 0 2 2 2 0 RWD domain DUF963 PF06131.11 ORF81054 - 5.4e-07 28.9 70.8 0.018 14.5 3.2 8.9 3 2 4 8 8 8 6 Schizosaccharomyces pombe repeat of unknown function (DUF963) EFP PF01132.20 ORF7137 - 0.053 13.6 0.5 0.053 13.6 0.5 1.8 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain DUF3641 PF12345.8 ORF7137 - 0.31 11.1 2.9 0.37 10.8 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3641) RRM_1 PF00076.22 ORF69664 - 4.2e-18 64.9 0.0 0.0001 22.1 0.0 3.5 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Calcipressin PF04847.12 ORF69664 - 7.3e-05 22.6 1.0 0.072 12.8 0.0 3.1 3 0 0 3 3 3 2 Calcipressin CP12 PF02672.15 ORF69664 - 0.88 10.4 3.9 35 5.2 0.0 3.1 4 0 0 4 4 4 0 CP12 domain DUF896 PF05979.12 ORF69664 - 1.7 8.6 5.3 6.2 6.8 0.1 3.0 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF896) Phage_HK97_TLTM PF06120.11 ORF65226 - 0.048 12.8 1.9 0.079 12.1 1.9 1.3 1 0 0 1 1 1 0 Tail length tape measure protein Uds1 PF15456.6 ORF65226 - 0.14 12.3 1.4 0.19 11.9 0.4 1.7 2 0 0 2 2 2 0 Up-regulated During Septation Glycohydro_20b2 PF14845.6 ORF65226 - 0.46 11.1 4.7 7.6 7.2 0.0 2.9 2 1 0 2 2 2 0 beta-acetyl hexosaminidase like Phage_HK97_TLTM PF06120.11 ORF60654 - 0.048 12.8 1.9 0.079 12.1 1.9 1.3 1 0 0 1 1 1 0 Tail length tape measure protein Uds1 PF15456.6 ORF60654 - 0.14 12.3 1.4 0.19 11.9 0.4 1.7 2 0 0 2 2 2 0 Up-regulated During Septation Glycohydro_20b2 PF14845.6 ORF60654 - 0.46 11.1 4.7 7.6 7.2 0.0 2.9 2 1 0 2 2 2 0 beta-acetyl hexosaminidase like Pkinase PF00069.25 ORF4853 - 4.3e-48 164.0 0.0 8.8e-48 163.0 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4853 - 2.4e-17 63.1 0.8 3.4e-17 62.6 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF4853 - 6.2e-06 26.3 0.9 0.011 15.7 0.1 2.8 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF4853 - 7.2e-06 25.5 0.0 0.00072 19.0 0.0 2.4 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF4853 - 0.0015 17.4 0.4 0.014 14.2 0.0 2.0 2 0 0 2 2 2 1 Fungal protein kinase DUF2785 PF10978.8 ORF4853 - 0.0067 16.2 0.8 0.014 15.2 0.8 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2785) UPF0242 PF06785.11 ORF4853 - 0.0094 16.1 1.6 0.018 15.2 1.6 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FlxA PF14282.6 ORF4853 - 0.023 14.7 8.8 0.043 13.8 8.8 1.3 1 0 0 1 1 1 0 FlxA-like protein Peptidase_S64 PF08192.11 ORF4853 - 0.028 12.9 0.8 0.037 12.5 0.8 1.2 1 0 0 1 1 1 0 Peptidase family S64 APG6_N PF17675.1 ORF4853 - 0.05 14.1 5.6 0.095 13.2 5.6 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF4853 - 0.057 11.3 1.4 0.071 11.0 1.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FliJ PF02050.16 ORF4853 - 0.086 13.1 8.0 0.16 12.2 8.0 1.3 1 0 0 1 1 1 0 Flagellar FliJ protein DUF4745 PF15923.5 ORF4853 - 0.094 12.7 0.3 0.18 11.8 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4745) Uso1_p115_C PF04871.13 ORF4853 - 0.15 12.5 6.3 0.29 11.5 6.3 1.5 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF4407 PF14362.6 ORF4853 - 0.18 11.2 3.2 0.27 10.6 3.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Prefoldin_2 PF01920.20 ORF4853 - 0.3 11.1 7.1 0.62 10.1 7.1 1.4 1 0 0 1 1 1 0 Prefoldin subunit PDEase_I_N PF08499.12 ORF4853 - 0.3 10.9 1.7 0.87 9.5 0.5 2.2 2 0 0 2 2 2 0 3'5'-cyclic nucleotide phosphodiesterase N-terminal Cep57_CLD_2 PF14197.6 ORF4853 - 0.31 11.2 5.2 0.54 10.4 3.1 2.4 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 CREPT PF16566.5 ORF4853 - 0.72 10.0 9.0 0.86 9.8 5.1 2.4 2 1 1 3 3 2 0 Cell-cycle alteration and expression-elevated protein in tumour DUF1664 PF07889.12 ORF4853 - 2.4 8.2 6.8 7.3 6.7 6.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) LRR_6 PF13516.6 ORF37402 - 0.00086 19.2 2.4 43 4.5 0.1 6.0 5 1 0 5 5 5 1 Leucine Rich repeat LRR_8 PF13855.6 ORF37402 - 2.8 7.8 7.4 4.6 7.1 0.3 3.8 4 1 0 4 4 4 0 Leucine rich repeat Carb_anhydrase PF00194.21 ORF35321 - 2.1e-08 34.0 0.0 4.2e-05 23.2 0.0 2.9 2 1 1 3 3 3 2 Eukaryotic-type carbonic anhydrase DUF4140 PF13600.6 ORF35321 - 0.018 15.5 6.4 2.5 8.6 0.5 2.9 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) Syntaxin-6_N PF09177.11 ORF35321 - 0.057 14.0 4.4 0.13 12.8 0.6 2.5 2 1 0 2 2 2 0 Syntaxin 6, N-terminal DUF1690 PF07956.11 ORF35321 - 0.32 11.4 4.3 1.5 9.2 1.0 2.4 2 0 0 2 2 2 0 Protein of Unknown function (DUF1690) Lzipper-MIP1 PF14389.6 ORF35321 - 0.43 10.9 9.6 3.7 7.9 3.4 3.2 3 0 0 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 Snapin_Pallidin PF14712.6 ORF35321 - 0.61 10.5 6.7 11 6.5 0.2 2.9 3 0 0 3 3 3 0 Snapin/Pallidin DivIC PF04977.15 ORF35321 - 1.3 8.9 8.6 2.1 8.1 2.8 2.6 2 0 0 2 2 2 0 Septum formation initiator DUF5320 PF17253.2 ORF35321 - 1.3 10.1 4.7 4.2 8.5 0.7 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5320) SOGA PF11365.8 ORF35321 - 2.3 9.4 9.2 12 7.1 0.1 3.1 3 0 0 3 3 3 0 Protein SOGA FapA PF03961.13 ORF35321 - 2.7 6.5 5.2 3.7 6.1 0.1 2.0 2 0 0 2 2 2 0 Flagellar Assembly Protein A SKA2 PF16740.5 ORF35321 - 2.9 7.7 9.2 3.1 7.6 2.1 2.6 3 0 0 3 3 3 0 Spindle and kinetochore-associated protein 2 FlxA PF14282.6 ORF35321 - 3.1 7.8 18.5 8.3 6.5 13.6 2.3 2 0 0 2 2 2 0 FlxA-like protein CLZ PF16526.5 ORF35321 - 3.9 7.9 8.7 9.9 6.6 1.2 2.6 3 0 0 3 3 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels GIT_CC PF16559.5 ORF35321 - 5.6 6.9 8.4 1.3 8.9 2.5 2.6 3 0 0 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Peptidase_C2 PF00648.21 ORF29115 - 1.9e-65 220.8 0.3 5.8e-65 219.2 0.3 1.8 1 1 0 1 1 1 1 Calpain family cysteine protease EF-hand_1 PF00036.32 ORF29115 - 0.00018 20.8 0.0 0.00054 19.3 0.0 1.9 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 ORF29115 - 0.00029 20.2 0.0 0.00064 19.1 0.0 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF29115 - 0.00044 20.0 0.0 0.0012 18.6 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF29115 - 0.0016 18.3 0.0 0.0028 17.5 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF29115 - 0.0062 17.0 0.0 0.018 15.5 0.0 1.8 1 0 0 1 1 1 1 EF-hand domain pair DUF4747 PF15931.5 ORF18874 - 0.057 13.1 1.5 0.34 10.5 2.8 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4747) PRKG1_interact PF15898.5 ORF18874 - 0.11 13.4 2.5 0.22 12.5 2.5 1.5 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain DUF4747 PF15931.5 ORF18415 - 0.057 13.1 1.5 0.34 10.5 2.8 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4747) PRKG1_interact PF15898.5 ORF18415 - 0.11 13.4 2.5 0.22 12.5 2.5 1.5 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Peptidase_M16_M PF16187.5 ORF14765 - 5.4e-33 114.5 0.1 2e-32 112.6 0.0 1.8 2 0 0 2 2 2 1 Middle or third domain of peptidase_M16 Peptidase_M16_C PF05193.21 ORF14765 - 7.1e-08 32.7 0.0 1.5e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16_C PF05193.21 ORF1440 - 1.7e-20 73.8 0.0 2.5e-20 73.3 0.0 1.3 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 ORF1440 - 0.001 19.1 0.1 0.0022 18.0 0.0 1.6 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) Kinesin PF00225.23 ORF11211 - 5.1e-76 255.7 0.1 7.6e-76 255.2 0.1 1.3 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF11211 - 0.00039 20.4 0.2 0.0016 18.4 0.0 2.2 2 0 0 2 2 2 1 Microtubule binding betaPIX_CC PF16523.5 ORF11211 - 0.66 9.8 7.2 4.9 7.1 0.3 2.9 3 0 0 3 3 3 0 betaPIX coiled coil TMF_TATA_bd PF12325.8 ORF11211 - 3.5 7.9 16.6 1.2 9.3 1.9 3.5 2 1 0 3 3 3 0 TATA element modulatory factor 1 TATA binding DivIC PF04977.15 ORF11211 - 4.2 7.2 13.2 0.42 10.4 0.4 3.5 3 0 0 3 3 3 0 Septum formation initiator FlaC_arch PF05377.11 ORF11211 - 5.3 7.5 9.3 15 6.1 1.4 3.5 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) DNA_primase_lrg PF04104.14 ORF88979 - 2.3e-67 227.2 0.1 2.3e-67 227.2 0.1 1.6 2 0 0 2 2 2 1 Eukaryotic and archaeal DNA primase, large subunit Pkinase PF00069.25 ORF88938 - 4e-56 190.3 0.0 5.4e-56 189.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF88938 - 1.5e-24 86.7 0.1 1.9e-24 86.3 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF88938 - 3.3e-14 53.1 0.1 3.3e-08 33.9 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF88938 - 2.8e-11 42.1 0.3 0.01 15.3 0.0 4.4 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF88938 - 1.2e-10 40.5 0.1 0.0025 17.6 0.0 4.5 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF88938 - 4.3e-10 39.3 0.5 0.00013 21.7 0.0 3.8 1 1 3 4 4 4 3 EF-hand domain pair Pkinase_fungal PF17667.1 ORF88938 - 0.00024 20.0 0.0 0.00082 18.3 0.0 1.7 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF88938 - 0.0085 16.0 0.1 0.018 14.9 0.1 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF88938 - 0.013 14.8 0.2 0.025 14.0 0.2 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF88938 - 0.074 12.7 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 YrbL-PhoP_reg PF10707.9 ORF88938 - 0.13 11.8 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL PheRS_DBD2 PF18554.1 ORF806 - 1 9.4 3.0 9.1 6.4 0.1 2.8 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Cation_ATPase PF13246.6 ORF79950 - 4.2e-15 55.6 0.1 1.1e-13 51.0 0.0 2.5 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 ORF79950 - 1.1e-08 35.6 0.4 8.8e-08 32.7 0.4 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 ORF79950 - 0.00084 18.9 0.3 0.0017 17.9 0.3 1.4 1 0 0 1 1 1 1 E1-E2 ATPase DUF4079 PF13301.6 ORF79950 - 0.14 12.3 0.1 0.24 11.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4079) HMG_box PF00505.19 ORF71444 - 6e-34 116.3 16.3 6.6e-20 71.3 7.6 2.6 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF71444 - 3e-23 82.2 18.1 2.2e-15 57.0 7.8 2.5 2 0 0 2 2 2 2 HMG-box domain CHDNT PF08073.12 ORF71444 - 0.00065 19.6 0.3 0.0033 17.4 0.2 2.2 2 0 0 2 2 2 1 CHDNT (NUC034) domain HMG_box_5 PF14887.6 ORF71444 - 0.011 15.6 3.6 0.011 15.6 3.6 2.4 2 0 0 2 2 2 0 HMG (high mobility group) box 5 Pox_polyA_pol_N PF12630.7 ORF71444 - 0.031 14.6 0.9 0.031 14.6 0.9 2.3 2 0 0 2 2 2 0 Poxvirus poly(A) polymerase N-terminal domain Focal_AT PF03623.13 ORF71444 - 0.24 11.4 0.1 0.24 11.4 0.1 2.2 2 0 0 2 2 2 0 Focal adhesion targeting region Med11 PF10280.9 ORF71444 - 1.2 9.5 7.5 0.29 11.6 0.3 3.0 2 1 0 2 2 2 0 Mediator complex protein Sulfatase PF00884.23 ORF65246 - 2.5e-22 79.7 0.0 3.6e-22 79.1 0.0 1.2 1 0 0 1 1 1 1 Sulfatase DUF4994 PF16385.5 ORF65246 - 0.0043 17.0 0.6 0.027 14.4 0.2 2.2 1 1 1 2 2 2 1 Domain of unknown function DUF4976 PF16347.5 ORF65246 - 0.028 14.7 0.6 0.06 13.6 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) AIRS_C PF02769.22 ORF65162 - 3.9e-22 79.1 0.1 7.4e-22 78.1 0.1 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF65162 - 1.1e-14 54.9 0.5 1.1e-14 54.9 0.5 3.0 3 1 1 4 4 4 1 AIR synthase related protein, N-terminal domain XhlA PF10779.9 ORF63074 - 0.044 14.0 10.6 0.19 11.9 0.6 4.6 4 1 1 5 5 5 0 Haemolysin XhlA TMP_2 PF06791.13 ORF63074 - 0.16 11.6 0.1 0.33 10.6 0.1 1.5 1 0 0 1 1 1 0 Prophage tail length tape measure protein DUF948 PF06103.11 ORF63074 - 0.99 9.7 19.0 1.4 9.3 0.4 4.8 3 3 2 5 5 5 0 Bacterial protein of unknown function (DUF948) Baculo_PEP_C PF04513.12 ORF63074 - 1.3 9.1 10.4 15 5.6 0.5 4.1 4 0 0 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus HSBP1 PF06825.12 ORF63074 - 6.6 6.7 11.7 0.88 9.5 0.0 4.8 5 1 0 5 5 5 0 Heat shock factor binding protein 1 CCDC53 PF10152.9 ORF63074 - 8.6 6.8 10.3 0.78 10.2 0.3 2.7 3 0 0 3 3 3 0 Subunit CCDC53 of WASH complex TPR_12 PF13424.6 ORF61259 - 7.7e-14 51.7 24.3 1.8e-06 28.1 5.2 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF61259 - 3.5e-13 49.6 28.7 2.4e-05 23.9 2.5 3.1 2 1 1 3 3 3 3 MalT-like TPR region PP-binding PF00550.25 ORF61259 - 1.3e-10 41.4 0.3 3.1e-10 40.3 0.3 1.6 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_2 PF07719.17 ORF61259 - 2.1e-08 33.7 23.0 0.021 14.9 0.4 6.8 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF61259 - 1.4e-07 31.7 28.4 0.086 13.7 0.2 7.5 6 1 1 7 7 7 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF61259 - 4.7e-07 29.5 3.3 0.011 15.9 0.1 5.3 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF61259 - 3.6e-05 24.2 23.6 0.32 11.5 0.8 6.3 2 2 5 7 7 7 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF61259 - 0.00013 21.6 15.9 0.051 13.4 0.1 5.0 5 0 0 5 5 5 2 Tetratricopeptide repeat Phage_tail_S PF05069.13 ORF61259 - 0.0018 18.1 2.4 0.027 14.3 0.2 2.4 2 0 0 2 2 2 1 Phage virion morphogenesis family TOM20_plant PF06552.12 ORF61259 - 0.0027 17.5 0.0 0.024 14.4 0.0 2.3 2 0 0 2 2 2 1 Plant specific mitochondrial import receptor subunit TOM20 ANAPC3 PF12895.7 ORF61259 - 0.0029 17.8 14.0 0.34 11.2 3.1 4.9 3 2 1 4 4 4 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_4 PF07721.14 ORF61259 - 0.0074 16.8 27.9 0.84 10.4 0.9 6.7 6 0 0 6 6 6 3 Tetratricopeptide repeat Exonuc_VII_S PF02609.16 ORF61259 - 0.018 15.1 0.4 1.7 8.7 0.2 3.0 2 0 0 2 2 2 0 Exonuclease VII small subunit TPR_16 PF13432.6 ORF61259 - 0.1 13.2 0.3 0.1 13.2 0.3 5.7 5 2 2 7 7 5 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF61259 - 0.11 12.6 12.4 2.7 8.1 0.2 4.8 3 2 2 5 5 5 0 Anaphase-promoting complex subunit 5 PPR_1 PF12854.7 ORF61259 - 0.53 10.0 2.1 7.4 6.4 0.1 3.2 4 0 0 4 4 4 0 PPR repeat DUF3856 PF12968.7 ORF61259 - 0.76 9.8 8.0 0.19 11.8 0.8 2.8 2 1 0 2 2 2 0 Domain of Unknown Function (DUF3856) TPR_10 PF13374.6 ORF61259 - 1.5 8.8 19.7 0.41 10.6 0.6 5.6 5 2 1 6 6 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF61259 - 1.9 8.7 8.4 1.7 8.8 0.1 3.7 4 0 0 4 4 2 0 Tetratricopeptide repeat TIR_2 PF13676.6 ORF52923 - 0.0019 18.8 0.0 0.0043 17.7 0.0 1.5 1 0 0 1 1 1 1 TIR domain TIR PF01582.20 ORF52923 - 0.0023 17.8 0.0 0.0041 16.9 0.0 1.3 1 0 0 1 1 1 1 TIR domain DUF1863 PF08937.11 ORF52923 - 0.024 15.0 0.0 0.044 14.1 0.0 1.4 1 0 0 1 1 1 0 MTH538 TIR-like domain (DUF1863) AMP-binding PF00501.28 ORF32951 - 1.2e-66 225.0 0.0 1.6e-66 224.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF32951 - 3e-15 56.9 0.0 5.4e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Pkinase PF00069.25 ORF21955 - 2.1e-75 253.5 0.1 4.4e-75 252.5 0.1 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF21955 - 5.4e-34 117.6 0.0 1.1e-33 116.6 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF21955 - 6.5e-17 59.7 5.6 8.3e-05 21.9 0.0 4.0 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF21955 - 7.6e-16 58.3 4.7 7.9e-12 45.5 0.1 3.7 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF21955 - 1.4e-14 52.7 5.1 0.00022 20.9 0.1 4.0 3 0 0 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 ORF21955 - 2e-13 49.1 3.6 0.00029 20.2 0.0 3.7 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF21955 - 8.1e-10 38.4 3.3 3e-08 33.4 0.2 2.9 2 0 0 2 2 2 1 EF-hand domain pair EFhand_Ca_insen PF08726.10 ORF21955 - 7.8e-05 22.7 0.0 0.00021 21.3 0.0 1.8 1 0 0 1 1 1 1 Ca2+ insensitive EF hand SPARC_Ca_bdg PF10591.9 ORF21955 - 0.00027 21.2 8.2 0.00036 20.8 0.9 3.5 3 1 0 3 3 3 1 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF21955 - 0.0018 17.6 0.5 0.0037 16.7 0.0 1.8 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF21955 - 0.0046 16.9 0.3 0.015 15.2 0.3 1.9 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand APH PF01636.23 ORF21955 - 0.0052 16.7 0.0 0.0089 16.0 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF21955 - 0.011 15.0 0.0 0.36 10.1 0.0 2.5 1 1 0 2 2 2 0 Kinase-like Caleosin PF05042.13 ORF21955 - 0.036 14.0 0.1 3.3 7.6 0.0 2.8 2 1 0 2 2 2 0 Caleosin related protein EF-hand_9 PF14658.6 ORF21955 - 0.064 13.6 0.9 0.45 10.9 0.0 2.9 3 0 0 3 3 3 0 EF-hand domain DUF2073 PF09846.9 ORF21955 - 0.23 11.3 2.6 1.6 8.6 0.2 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2073) MutS_III PF05192.18 ORF21955 - 0.94 9.7 3.3 15 5.8 1.3 2.4 1 1 0 2 2 2 0 MutS domain III HMG_box PF00505.19 ORF18072 - 6e-34 116.3 16.3 6.6e-20 71.3 7.6 2.6 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF18072 - 3e-23 82.2 18.1 2.2e-15 57.0 7.8 2.5 2 0 0 2 2 2 2 HMG-box domain CHDNT PF08073.12 ORF18072 - 0.00065 19.6 0.3 0.0033 17.4 0.2 2.2 2 0 0 2 2 2 1 CHDNT (NUC034) domain HMG_box_5 PF14887.6 ORF18072 - 0.011 15.6 3.6 0.011 15.6 3.6 2.4 2 0 0 2 2 2 0 HMG (high mobility group) box 5 Pox_polyA_pol_N PF12630.7 ORF18072 - 0.031 14.6 0.9 0.031 14.6 0.9 2.3 2 0 0 2 2 2 0 Poxvirus poly(A) polymerase N-terminal domain Focal_AT PF03623.13 ORF18072 - 0.24 11.4 0.1 0.24 11.4 0.1 2.2 2 0 0 2 2 2 0 Focal adhesion targeting region Med11 PF10280.9 ORF18072 - 1.2 9.5 7.5 0.29 11.6 0.3 3.0 2 1 0 2 2 2 0 Mediator complex protein TPH PF13868.6 ORF101071 - 4.6e-12 45.1 117.6 4.6e-12 45.1 117.6 1.8 2 0 0 2 2 2 1 Trichohyalin-plectin-homology domain LRR_6 PF13516.6 ORF94978 - 0.001 19.0 2.4 42 4.5 0.1 5.9 5 1 0 5 5 5 1 Leucine Rich repeat LRR_8 PF13855.6 ORF94978 - 3.8 7.3 8.1 4.6 7.1 0.3 3.8 4 1 0 4 4 4 0 Leucine rich repeat HSP90 PF00183.18 ORF59663 - 4.7e-217 722.0 18.8 6.2e-217 721.6 18.8 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF59663 - 0.065 13.2 1.0 0.28 11.1 0.1 2.2 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF59663 - 0.087 12.9 1.5 0.15 12.0 0.1 2.1 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF59663 - 0.47 10.4 2.8 22 5.0 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain PAS_4 PF08448.10 ORF58927 - 4.7e-06 26.8 0.6 0.00064 20.0 0.3 2.6 2 0 0 2 2 2 2 PAS fold MutS_V PF00488.21 ORF55644 - 8.2e-22 78.1 0.0 1.7e-21 77.1 0.0 1.5 1 0 0 1 1 1 1 MutS domain V AAA_21 PF13304.6 ORF55644 - 0.009 15.9 0.0 0.042 13.6 0.0 2.0 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF724 PF05266.14 ORF55644 - 0.84 9.4 11.1 1.3 8.8 11.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 ORF55644 - 1.6 8.8 9.0 2.4 8.2 9.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3584 PF12128.8 ORF55644 - 1.9 5.9 21.4 3.2 5.1 21.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_23 PF13476.6 ORF55644 - 3.4 8.1 6.6 18 5.7 2.5 2.3 2 0 0 2 2 2 0 AAA domain GBP_C PF02841.14 ORF55644 - 6.5 6.1 16.4 27 4.0 15.1 2.0 2 0 0 2 2 2 0 Guanylate-binding protein, C-terminal domain HSP90 PF00183.18 ORF50516 - 4.7e-217 722.0 18.8 6.2e-217 721.6 18.8 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF50516 - 0.065 13.2 1.0 0.28 11.1 0.1 2.2 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF50516 - 0.087 12.9 1.5 0.15 12.0 0.1 2.1 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF50516 - 0.47 10.4 2.8 22 5.0 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain NAD_binding_5 PF07994.12 ORF47038 - 5.7e-103 344.7 0.0 7.1e-103 344.4 0.0 1.1 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase Inos-1-P_synth PF01658.17 ORF47038 - 1.9e-38 131.1 0.1 3.9e-38 130.0 0.1 1.6 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase MltA PF03562.17 ORF41495 - 1.7e-42 145.7 1.2 1.3e-40 139.5 1.2 2.2 1 1 0 1 1 1 1 MltA specific insert domain 3D PF06725.11 ORF41495 - 2.8e-25 88.3 0.0 6.2e-25 87.2 0.0 1.6 1 0 0 1 1 1 1 3D domain Kelch_5 PF13854.6 ORF35474 - 2.7e-15 56.0 11.7 0.0094 15.9 0.0 5.9 6 0 0 6 6 6 5 Kelch motif Kelch_3 PF13415.6 ORF35474 - 2.8e-11 43.4 15.1 0.0015 18.7 0.0 6.4 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF35474 - 2e-10 40.1 1.9 0.022 14.3 0.0 6.5 6 0 0 6 6 6 3 Kelch motif Kelch_6 PF13964.6 ORF35474 - 3.6e-09 36.6 6.0 0.43 10.9 0.5 5.5 4 1 1 5 5 5 3 Kelch motif Kelch_2 PF07646.15 ORF35474 - 9e-09 35.0 7.1 0.099 12.7 0.4 6.4 6 0 0 6 6 6 2 Kelch motif Kelch_4 PF13418.6 ORF35474 - 2.5e-07 30.6 15.0 0.016 15.2 0.1 6.3 6 0 0 6 6 6 3 Galactose oxidase, central domain DUF4185 PF13810.6 ORF35474 - 0.00059 19.2 15.0 0.66 9.1 0.1 4.1 2 1 1 3 3 3 3 Domain of unknown function (DUF4185) Sortilin-Vps10 PF15902.5 ORF35474 - 0.0013 17.6 1.8 3 6.5 0.0 3.0 2 1 2 4 4 4 3 Sortilin, neurotensin receptor 3, BNR PF02012.20 ORF35474 - 0.36 11.0 13.1 3.2 8.1 1.0 4.4 3 0 0 3 3 3 0 BNR/Asp-box repeat FAA_hydrolase PF01557.18 ORF25584 - 5.8e-37 127.5 0.0 8.2e-37 127.0 0.0 1.2 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family ApbA_C PF08546.11 ORF25584 - 8.1e-16 58.4 0.0 1.5e-15 57.5 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.16 ORF25584 - 2.9e-10 40.0 0.0 6.7e-10 38.8 0.0 1.7 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA DUF745 PF05335.13 ORF20774 - 0.017 14.9 3.7 0.017 14.9 3.7 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF745) Syntaxin-5_N PF11416.8 ORF20774 - 0.075 12.3 0.4 0.19 11.0 0.4 1.7 1 0 0 1 1 1 0 Syntaxin-5 N-terminal, Sly1p-binding domain GCN5L1 PF06320.13 ORF20774 - 1.6 8.9 14.1 4.1 7.6 4.0 3.2 3 0 0 3 3 3 0 GCN5-like protein 1 (GCN5L1) APG6_N PF17675.1 ORF20774 - 2 8.9 23.5 13 6.4 12.9 4.0 3 1 1 4 4 4 0 Apg6 coiled-coil region TPR_MLP1_2 PF07926.12 ORF19449 - 0.00062 19.8 71.4 0.27 11.3 10.0 5.7 1 1 4 5 5 5 3 TPR/MLP1/MLP2-like protein GAS PF13851.6 ORF19449 - 0.0018 17.7 80.9 0.39 10.0 12.5 4.5 1 1 3 4 4 4 3 Growth-arrest specific micro-tubule binding bZIP_1 PF00170.21 ORF19449 - 0.0074 16.4 2.2 0.0074 16.4 2.2 8.8 5 1 5 11 11 11 2 bZIP transcription factor APG6_N PF17675.1 ORF19449 - 0.027 15.0 79.6 0.2 12.2 14.7 5.6 1 1 4 5 5 5 0 Apg6 coiled-coil region Unstab_antitox PF09720.10 ORF19449 - 0.053 13.6 0.7 1.7 8.7 0.2 2.8 2 0 0 2 2 2 0 Putative addiction module component FUSC PF04632.12 ORF19449 - 0.091 11.3 6.7 0.17 10.4 1.5 2.6 2 1 1 3 3 3 0 Fusaric acid resistance protein family ERM PF00769.19 ORF19449 - 0.44 10.3 68.1 0.14 12.0 5.7 4.0 1 1 2 3 3 3 0 Ezrin/radixin/moesin family Trimer_CC PF08954.11 ORF19449 - 2 8.0 10.6 0.86 9.2 0.7 4.2 3 1 1 4 4 4 0 Trimerisation motif DUF4201 PF13870.6 ORF19449 - 5.2 6.8 81.6 7.3 6.3 10.4 5.7 1 1 4 5 5 5 0 Domain of unknown function (DUF4201) AAA_13 PF13166.6 ORF19449 - 5.5 5.5 65.3 0.26 9.9 21.6 3.0 1 1 2 3 3 3 0 AAA domain DUF948 PF06103.11 ORF19449 - 5.6 7.3 25.1 10 6.5 0.8 6.0 4 2 2 6 6 6 0 Bacterial protein of unknown function (DUF948) HSP90 PF00183.18 ORF19382 - 4.7e-217 722.0 18.8 6.2e-217 721.6 18.8 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF19382 - 0.065 13.2 1.0 0.28 11.1 0.1 2.2 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF19382 - 0.087 12.9 1.5 0.15 12.0 0.1 2.1 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF19382 - 0.47 10.4 2.8 22 5.0 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain ENTH PF01417.20 ORF1309 - 6.6e-29 100.5 0.1 1.4e-28 99.4 0.0 1.6 2 0 0 2 2 2 1 ENTH domain ANTH PF07651.16 ORF1309 - 0.011 14.8 0.0 0.017 14.2 0.0 1.2 1 0 0 1 1 1 0 ANTH domain Metallophos PF00149.28 ORF98964 - 5.4e-16 59.7 3.3 1e-15 58.8 3.4 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF98964 - 0.00019 21.7 0.0 0.012 15.8 0.0 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PhoD PF09423.10 ORF98964 - 0.0004 19.5 0.2 0.0046 16.0 0.1 2.0 2 0 0 2 2 2 1 PhoD-like phosphatase RRM_2 PF04059.12 ORF91602 - 6.6e-20 71.1 0.0 9.7e-20 70.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF91602 - 0.019 14.8 0.0 0.058 13.2 0.0 1.8 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TSC22 PF01166.18 ORF91602 - 0.085 13.2 0.2 0.17 12.2 0.2 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family ATP-synt_ab PF00006.25 ORF90124 - 1.8e-66 223.9 0.0 2.5e-66 223.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 ORF90124 - 6.3e-13 49.0 0.6 1.2e-12 48.1 0.6 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain Rad10 PF03834.14 ORF90124 - 0.16 12.0 0.0 0.3 11.1 0.0 1.4 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) AMP-binding PF00501.28 ORF80826 - 1.5e-57 195.1 0.0 1.8e-57 194.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF80826 - 7.3e-08 33.3 0.0 1.6e-07 32.2 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 ORF80826 - 9.7e-05 21.4 0.0 0.0059 15.5 0.0 2.1 2 0 0 2 2 2 2 GH3 auxin-responsive promoter Nucleotid_trans PF03407.16 ORF42988 - 5.4e-09 36.3 0.0 4e-07 30.2 0.0 2.6 2 1 0 2 2 2 2 Nucleotide-diphospho-sugar transferase EF-hand_10 PF14788.6 ORF42988 - 1 9.3 7.8 18 5.3 1.5 3.4 2 1 1 3 3 3 0 EF hand Ion_trans PF00520.31 ORF2647 - 4.7e-19 68.6 5.8 6.6e-19 68.1 5.8 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF2647 - 9.7e-12 43.6 2.0 1.7e-05 24.1 0.4 2.5 2 0 0 2 2 2 2 EF hand Ion_trans_2 PF07885.16 ORF2647 - 3.2e-11 43.0 2.9 6.9e-11 42.0 2.9 1.6 1 0 0 1 1 1 1 Ion channel EF-hand_8 PF13833.6 ORF2647 - 5.3e-11 42.2 2.9 6.5e-06 25.9 0.1 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF2647 - 1.5e-10 40.2 1.3 0.00071 19.3 0.2 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF2647 - 6e-08 31.8 3.0 0.0054 16.2 0.1 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF2647 - 9.9e-08 32.3 0.5 3e-07 30.8 0.5 1.8 1 1 0 1 1 1 1 EF-hand domain pair PKD_channel PF08016.12 ORF2647 - 0.0041 15.8 4.6 0.0067 15.1 4.6 1.2 1 0 0 1 1 1 1 Polycystin cation channel Lebercilin PF15619.6 ORF83696 - 0.0054 16.4 6.3 0.0054 16.4 6.3 3.9 2 1 1 3 3 3 1 Ciliary protein causing Leber congenital amaurosis disease DUF4055 PF13264.6 ORF83696 - 1.2 9.2 9.5 0.13 12.4 1.6 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4055) RRM_2 PF04059.12 ORF78968 - 6.5e-20 71.1 0.0 9.7e-20 70.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF78968 - 0.029 14.2 0.0 0.058 13.2 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TSC22 PF01166.18 ORF78968 - 0.085 13.2 0.2 0.17 12.2 0.2 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family UDPGP PF01704.18 ORF66075 - 2.5e-33 115.3 0.8 3.4e-33 114.9 0.8 1.1 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase NTP_transf_3 PF12804.7 ORF66075 - 0.0099 16.2 0.0 0.017 15.5 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Swi5 PF07061.11 ORF66075 - 0.056 13.5 0.1 5.3 7.2 0.1 2.9 2 0 0 2 2 2 0 Swi5 MIP-T3 PF10243.9 ORF63747 - 1.6 8.7 7.2 1.8 8.6 0.2 3.3 3 1 1 4 4 4 0 Microtubule-binding protein MIP-T3 CH-like domain UDPGP PF01704.18 ORF61930 - 2.5e-33 115.3 0.8 3.4e-33 114.9 0.8 1.1 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase NTP_transf_3 PF12804.7 ORF61930 - 0.0099 16.2 0.0 0.017 15.5 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Swi5 PF07061.11 ORF61930 - 0.056 13.5 0.1 5.3 7.2 0.1 2.9 2 0 0 2 2 2 0 Swi5 PPR PF01535.20 ORF56337 - 6.7e-14 51.1 3.1 0.024 14.9 0.0 5.5 5 0 0 5 5 5 4 PPR repeat PPR_2 PF13041.6 ORF56337 - 5.1e-12 45.8 0.0 0.0017 18.5 0.0 5.3 5 1 1 6 6 6 3 PPR repeat family PPR_1 PF12854.7 ORF56337 - 2.4e-05 23.9 4.6 0.2 11.4 0.0 5.5 6 0 0 6 6 6 1 PPR repeat PPR_long PF17177.4 ORF56337 - 0.00015 21.2 4.1 6.1 6.1 0.0 4.8 1 1 2 5 5 5 3 Pentacotripeptide-repeat region of PRORP Pkinase PF00069.25 ORF47982 - 3.3e-51 174.2 0.0 4.4e-51 173.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF47982 - 5.2e-23 81.6 0.0 7.5e-23 81.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF47982 - 4.9e-06 25.6 0.0 8.7e-06 24.8 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF47982 - 0.00033 20.6 0.6 0.78 9.6 0.1 2.5 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF47982 - 0.0021 17.4 0.0 0.0031 16.9 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF47982 - 0.015 14.7 0.1 0.029 13.7 0.1 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Lebercilin PF15619.6 ORF12442 - 0.0054 16.4 6.3 0.0054 16.4 6.3 3.9 2 1 1 3 3 3 1 Ciliary protein causing Leber congenital amaurosis disease DUF4055 PF13264.6 ORF12442 - 1.2 9.2 9.5 0.13 12.4 1.6 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4055) Chloroa_b-bind PF00504.21 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_1 - 1.3e-99 331.3 7.7 1.9e-34 119.5 0.1 4.0 4 0 0 4 4 4 4 Chlorophyll A-B binding protein BtrH_N PF14399.6 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_1 - 4.6e-06 26.9 0.0 10 6.4 0.0 4.8 6 0 0 6 6 6 3 Butirosin biosynthesis protein H, N-terminal Glyco_hydro_32C PF08244.12 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_1 - 0.0021 18.1 0.0 16 5.5 0.0 3.2 3 0 0 3 3 3 2 Glycosyl hydrolases family 32 C terminal Atu4866 PF11512.8 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_1 - 0.0078 16.6 0.0 8.3 6.9 0.0 2.6 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_1 - 0.0093 16.0 0.0 11 6.2 0.0 2.8 3 0 0 3 3 3 2 Hypothetical protein Yopt TRP_2 PF08344.11 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_1 - 0.011 15.9 0.0 64 3.9 0.0 3.3 3 0 0 3 3 3 0 Transient receptor ion channel II DUF1045 PF06299.12 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_1 - 0.02 14.9 0.0 29 4.6 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1045) DUF1737 PF08410.10 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_1 - 0.087 12.7 0.0 1.1e+02 2.8 0.0 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF1737) hNIFK_binding PF12196.8 NODE_8326_length_1472_cov_4881.728601_g6123_i0forward_frame_1 - 0.00036 20.0 0.4 8 6.0 0.0 3.3 3 0 0 3 3 3 3 FHA Ki67 binding domain of hNIFK DUF397 PF04149.12 NODE_8326_length_1472_cov_4881.728601_g6123_i0forward_frame_1 - 0.016 15.3 0.0 20 5.3 0.0 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF397) Rbx_binding PF18113.1 NODE_8326_length_1472_cov_4881.728601_g6123_i0forward_frame_1 - 1 9.2 2.9 41 4.1 0.2 3.0 2 2 0 2 2 2 0 Rubredoxin binding C-terminal domain Peptidase_S28 PF05577.12 NODE_8295_length_1474_cov_1130.151494_g5294_i1forward_frame_2 - 6.7e-76 255.8 5.2 4.5e-75 253.1 5.2 1.9 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 NODE_8295_length_1474_cov_1130.151494_g5294_i1forward_frame_2 - 0.003 17.0 0.7 0.006 16.1 0.1 1.8 2 0 0 2 2 2 1 Prolyl oligopeptidase family Shisa PF13908.6 ORF95999 - 0.0025 18.1 1.3 0.011 16.1 0.6 2.2 2 0 0 2 2 2 1 Wnt and FGF inhibitory regulator Antimicrobial12 PF08107.11 ORF95999 - 0.2 11.4 3.3 0.33 10.7 3.3 1.3 1 0 0 1 1 1 0 Pleurocidin family PTH2 PF01981.16 ORF95999 - 0.7 10.2 4.4 0.3 11.4 0.2 2.5 2 1 1 3 3 3 0 Peptidyl-tRNA hydrolase PTH2 DUF1461 PF07314.11 ORF95999 - 2.6 7.9 7.0 33 4.3 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1461) V-ATPase_G_2 PF16999.5 ORF95999 - 3.9 7.9 13.5 5.1 7.6 6.7 3.1 1 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit PARP PF00644.20 ORF85645 - 6.6e-06 25.8 0.0 1.2e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain MVL PF12151.8 ORF85645 - 0.37 10.7 2.6 2 8.3 0.0 2.7 2 0 0 2 2 2 0 Mannan-binding protein zf-C3HC4 PF00097.25 ORF80539 - 0.00074 19.3 5.5 0.0017 18.2 5.5 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF80539 - 0.00083 19.3 2.7 0.00083 19.3 2.7 1.9 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_2 PF13639.6 ORF80539 - 0.00095 19.5 10.4 0.0015 18.8 7.1 2.3 2 0 0 2 2 2 1 Ring finger domain Zn_ribbon_17 PF17120.5 ORF80539 - 0.016 14.8 3.7 0.073 12.7 4.1 1.9 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF80539 - 0.02 14.6 8.7 0.28 10.9 6.5 2.6 2 0 0 2 2 2 0 RING-like zinc finger zf-rbx1 PF12678.7 ORF80539 - 0.021 15.1 4.5 0.021 15.1 4.5 2.1 2 0 0 2 2 2 0 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF80539 - 0.035 14.3 2.4 0.11 12.7 2.4 1.9 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF80539 - 3.1 7.8 10.4 4.1 7.4 8.0 2.2 2 0 0 2 2 2 0 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF80539 - 4.2 7.5 5.7 1.6 8.8 2.0 2.1 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger TIMELESS PF04821.14 ORF80063 - 0.062 12.6 1.7 0.12 11.6 1.7 1.4 1 0 0 1 1 1 0 Timeless protein OST-HTH PF12872.7 ORF80063 - 0.076 12.8 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 OST-HTH/LOTUS domain Borrelia_P83 PF05262.11 ORF80063 - 3.8 5.9 19.7 6.7 5.1 19.7 1.4 1 0 0 1 1 1 0 Borrelia P83/100 protein dsRBD2 PF17842.1 ORF77865 - 0.05 13.8 0.4 0.81 9.9 0.1 2.5 2 1 0 2 2 2 0 Double-stranded RNA binding domain 2 Ion_trans PF00520.31 ORF63386 - 3.2e-14 52.7 14.9 4.7e-14 52.2 14.9 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF63386 - 4.6e-07 29.3 0.0 0.021 14.7 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF63386 - 3e-05 23.2 0.2 0.22 11.1 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF63386 - 0.00068 20.0 0.0 0.0026 18.2 0.0 2.0 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF63386 - 0.0011 18.8 0.5 0.21 11.5 0.0 2.8 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF63386 - 0.0043 16.5 0.4 2.3 7.8 0.4 2.6 2 0 0 2 2 2 2 EF hand Med15 PF09606.10 ORF63386 - 0.094 11.4 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal LBP_BPI_CETP_C PF02886.17 ORF49296 - 5.8e-05 22.7 0.1 0.0001 21.9 0.1 1.4 1 0 0 1 1 1 1 LBP / BPI / CETP family, C-terminal domain DUF3971 PF13116.6 ORF49296 - 0.094 12.3 0.3 0.78 9.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function WWE PF02825.20 ORF47264 - 0.0066 17.0 0.0 0.014 16.0 0.0 1.5 1 0 0 1 1 1 1 WWE domain RINT1_TIP1 PF04437.13 ORF46782 - 4.9e-12 45.5 0.0 8.1e-12 44.8 0.0 1.3 1 0 0 1 1 1 1 RINT-1 / TIP-1 family Vps53_N PF04100.12 ORF46782 - 2.2e-07 30.2 0.0 9.1e-07 28.2 0.0 1.9 2 0 0 2 2 2 1 Vps53-like, N-terminal Sec6 PF06046.13 ORF46782 - 2.4e-07 29.5 0.0 3.5e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 Exocyst complex component Sec6 COG7 PF10191.9 ORF46782 - 0.00014 20.3 0.0 0.00034 19.0 0.0 1.5 1 1 1 2 2 2 1 Golgi complex component 7 (COG7) DUF2451 PF10474.9 ORF46782 - 0.04 13.7 0.0 0.066 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2451) Ammonium_transp PF00909.21 ORF45446 - 7.2e-116 387.2 25.3 8.4e-116 386.9 25.3 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family TMF_DNA_bd PF12329.8 ORF31648 - 0.0016 18.4 19.2 0.0016 18.4 19.2 4.5 1 1 3 4 4 3 1 TATA element modulatory factor 1 DNA binding HOOK PF05622.12 ORF31648 - 0.0019 16.4 32.1 0.0019 16.4 32.1 2.1 1 1 1 2 2 2 2 HOOK protein BLOC1_2 PF10046.9 ORF31648 - 0.0021 18.3 15.1 0.0021 18.3 15.1 4.3 2 1 3 5 5 5 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Seryl_tRNA_N PF02403.22 ORF31648 - 0.013 15.7 20.1 0.013 15.7 20.1 3.5 1 1 0 2 2 1 0 Seryl-tRNA synthetase N-terminal domain Phage_GP20 PF06810.11 ORF31648 - 0.018 14.8 51.5 0.84 9.4 18.4 3.9 1 1 2 3 3 3 0 Phage minor structural protein GP20 HTH_3 PF01381.22 ORF31648 - 0.022 14.8 1.2 0.079 13.0 1.2 2.0 1 0 0 1 1 1 0 Helix-turn-helix DUF3584 PF12128.8 ORF31648 - 0.14 9.7 39.1 0.19 9.2 39.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) HAUS-augmin3 PF14932.6 ORF31648 - 0.44 10.1 42.1 1 8.9 12.4 2.4 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 DivIVA PF05103.13 ORF31648 - 0.73 9.9 45.9 0.86 9.7 21.4 2.5 1 1 1 2 2 2 0 DivIVA protein Fez1 PF06818.15 ORF31648 - 0.73 10.2 46.9 0.052 14.0 28.3 2.3 1 1 1 2 2 2 0 Fez1 S_locus_glycop PF00954.20 ORF31648 - 1.9 9.0 3.9 1.7 9.2 0.5 2.6 2 1 1 3 3 3 0 S-locus glycoprotein domain Spc7 PF08317.11 ORF31648 - 2.3 7.0 55.8 2.5 6.9 34.5 2.6 2 1 1 3 3 3 0 Spc7 kinetochore protein HrpB7 PF09486.10 ORF31648 - 2.4 8.5 19.4 12 6.3 13.9 3.0 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) UPF0242 PF06785.11 ORF31648 - 3.3 7.8 60.2 3.1 7.8 25.7 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Tropomyosin_1 PF12718.7 ORF31648 - 4.4 7.4 59.0 0.14 12.3 43.8 2.4 1 1 1 2 2 2 0 Tropomyosin like ATG16 PF08614.11 ORF31648 - 4.7 7.4 51.1 1e+02 3.0 45.7 3.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) ERM PF00769.19 ORF31648 - 5.2 6.8 51.8 0.55 10.0 31.3 2.1 1 1 1 2 2 2 0 Ezrin/radixin/moesin family APG6_N PF17675.1 ORF31648 - 6 7.4 55.8 0.41 11.2 32.5 3.2 1 1 2 3 3 3 0 Apg6 coiled-coil region HTH_19 PF12844.7 ORF31648 - 6.9 6.8 11.7 0.18 11.8 3.5 2.6 2 1 1 3 3 3 0 Helix-turn-helix domain PspA_IM30 PF04012.12 ORF31648 - 7.8 6.0 41.5 1.8 8.1 25.8 2.5 2 1 1 3 3 3 0 PspA/IM30 family Laminin_I PF06008.14 ORF31648 - 7.9 6.1 43.9 4.6 6.9 20.2 2.6 1 1 2 3 3 3 0 Laminin Domain I Shisa PF13908.6 ORF23364 - 0.0029 17.9 1.0 0.013 15.8 0.4 2.2 2 0 0 2 2 2 1 Wnt and FGF inhibitory regulator Antimicrobial12 PF08107.11 ORF23364 - 0.2 11.4 3.3 0.33 10.7 3.3 1.3 1 0 0 1 1 1 0 Pleurocidin family PTH2 PF01981.16 ORF23364 - 0.66 10.3 4.3 0.3 11.4 0.2 2.5 2 1 1 3 3 3 0 Peptidyl-tRNA hydrolase PTH2 DUF1461 PF07314.11 ORF23364 - 3.3 7.6 7.3 35 4.2 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1461) V-ATPase_G_2 PF16999.5 ORF23364 - 3.4 8.1 13.5 5.1 7.6 6.7 3.2 1 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit Shisa PF13908.6 ORF21670 - 0.0031 17.8 1.0 0.014 15.7 0.5 2.2 2 0 0 2 2 2 1 Wnt and FGF inhibitory regulator Antimicrobial12 PF08107.11 ORF21670 - 0.2 11.4 3.3 0.33 10.7 3.3 1.3 1 0 0 1 1 1 0 Pleurocidin family PTH2 PF01981.16 ORF21670 - 0.63 10.3 4.3 0.3 11.4 0.2 2.6 2 1 1 3 3 3 0 Peptidyl-tRNA hydrolase PTH2 DUF1461 PF07314.11 ORF21670 - 3.3 7.6 7.3 35 4.2 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1461) V-ATPase_G_2 PF16999.5 ORF21670 - 3.5 8.1 13.5 5.1 7.6 6.7 3.2 1 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit AAA PF00004.29 ORF109060 - 4.5e-54 182.4 0.0 1.5e-39 135.5 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF109060 - 3.5e-12 47.0 0.0 0.00019 21.9 0.0 3.0 2 1 1 3 3 3 2 AAA ATPase domain AAA_22 PF13401.6 ORF109060 - 2.5e-10 40.7 1.3 0.00048 20.4 0.0 4.2 2 2 2 4 4 4 2 AAA domain AAA_5 PF07728.14 ORF109060 - 5.9e-09 36.1 0.0 0.00036 20.5 0.1 3.1 2 1 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_lid_3 PF17862.1 ORF109060 - 2.3e-08 33.7 0.0 1.2e-07 31.4 0.0 2.2 1 1 1 2 2 2 1 AAA+ lid domain AAA_2 PF07724.14 ORF109060 - 4.9e-08 33.3 0.0 1.3e-05 25.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) RNA_helicase PF00910.22 ORF109060 - 1.2e-07 32.0 0.0 0.026 14.9 0.0 3.2 3 0 0 3 3 2 2 RNA helicase AAA_14 PF13173.6 ORF109060 - 4e-07 30.1 0.0 0.0025 17.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 ORF109060 - 5.5e-07 29.8 0.0 0.025 14.8 0.0 2.5 2 1 0 2 2 2 2 AAA domain NACHT PF05729.12 ORF109060 - 2.6e-06 27.5 0.1 0.13 12.2 0.0 3.4 4 0 0 4 4 4 2 NACHT domain TsaE PF02367.17 ORF109060 - 3.5e-06 27.0 0.0 0.041 13.9 0.0 2.3 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 ORF109060 - 3.9e-06 27.4 0.0 0.0031 18.0 0.0 2.6 2 0 0 2 2 2 1 ABC transporter RuvB_N PF05496.12 ORF109060 - 5.2e-06 26.3 0.0 0.02 14.6 0.0 2.8 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain ATPase_2 PF01637.18 ORF109060 - 8e-06 25.9 0.1 3.1 7.7 0.0 4.0 2 2 2 4 4 4 1 ATPase domain predominantly from Archaea AAA_28 PF13521.6 ORF109060 - 8.4e-06 26.1 0.0 0.062 13.5 0.0 2.3 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 ORF109060 - 1.9e-05 24.2 0.0 0.0013 18.2 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF109060 - 3.4e-05 23.2 0.0 0.14 11.3 0.0 2.2 2 0 0 2 2 2 2 TIP49 P-loop domain Sigma54_activat PF00158.26 ORF109060 - 6.1e-05 22.8 0.0 0.28 10.9 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_7 PF12775.7 ORF109060 - 6.7e-05 22.5 0.0 0.034 13.7 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_24 PF13479.6 ORF109060 - 7.3e-05 22.6 0.2 0.015 15.1 0.0 2.8 2 2 0 2 2 2 1 AAA domain TniB PF05621.11 ORF109060 - 0.00013 21.4 0.1 2 7.8 0.0 4.2 3 2 1 4 4 4 1 Bacterial TniB protein AAA_18 PF13238.6 ORF109060 - 0.00015 22.3 0.0 0.06 13.9 0.0 2.7 3 0 0 3 3 2 1 AAA domain NB-ARC PF00931.22 ORF109060 - 0.00044 19.5 0.0 0.2 10.8 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain ATPase PF06745.13 ORF109060 - 0.00066 19.1 0.1 0.11 11.8 0.0 2.6 2 1 0 2 2 2 1 KaiC AAA_25 PF13481.6 ORF109060 - 0.00077 19.1 2.6 0.76 9.3 0.1 3.8 3 1 1 4 4 4 1 AAA domain AAA_3 PF07726.11 ORF109060 - 0.0021 17.9 0.0 0.11 12.3 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.22 ORF109060 - 0.0025 17.5 0.1 0.84 9.2 0.0 2.9 3 0 0 3 3 2 1 SRP54-type protein, GTPase domain SKI PF01202.22 ORF109060 - 0.003 17.7 0.1 0.88 9.7 0.0 2.7 3 0 0 3 3 3 1 Shikimate kinase AAA_30 PF13604.6 ORF109060 - 0.0034 17.1 0.0 0.039 13.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF109060 - 0.0039 17.0 0.0 0.38 10.5 0.0 2.5 2 0 0 2 2 2 1 IstB-like ATP binding protein Bac_DnaA PF00308.18 ORF109060 - 0.0051 16.7 0.0 0.23 11.3 0.0 2.8 3 0 0 3 3 3 1 Bacterial dnaA protein Rad17 PF03215.15 ORF109060 - 0.0077 16.2 0.0 1.8 8.4 0.0 2.9 2 0 0 2 2 2 1 Rad17 P-loop domain DUF2075 PF09848.9 ORF109060 - 0.0079 15.5 0.0 0.066 12.4 0.0 2.1 2 1 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) DAP3 PF10236.9 ORF109060 - 0.011 14.9 0.1 0.83 8.8 0.0 3.1 3 1 1 4 4 4 0 Mitochondrial ribosomal death-associated protein 3 AAA_17 PF13207.6 ORF109060 - 0.012 16.0 0.0 2.9 8.3 0.0 2.5 2 0 0 2 2 2 0 AAA domain Sigma54_activ_2 PF14532.6 ORF109060 - 0.013 15.6 0.0 5.7 7.1 0.0 2.6 2 0 0 2 2 2 0 Sigma-54 interaction domain ResIII PF04851.15 ORF109060 - 0.015 15.3 0.1 2.5 8.1 0.1 2.8 2 1 1 3 3 3 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 ORF109060 - 0.018 15.4 0.0 0.11 12.8 0.0 2.2 2 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF109060 - 0.023 14.0 0.0 4.2 6.6 0.0 2.6 2 0 0 2 2 2 0 Zeta toxin DUF815 PF05673.13 ORF109060 - 0.038 13.1 0.0 3.3 6.8 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF815) AAA_11 PF13086.6 ORF109060 - 0.051 13.4 0.0 0.21 11.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF109060 - 0.051 13.0 0.0 1.5 8.2 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein ATP-synt_ab PF00006.25 ORF109060 - 0.068 12.8 0.0 7 6.2 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain CbiA PF01656.23 ORF109060 - 0.1 12.7 0.0 17 5.5 0.0 2.6 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain IPT PF01745.16 ORF109060 - 0.12 11.8 0.0 18 4.6 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase AAA_13 PF13166.6 ORF109060 - 0.14 10.8 0.0 3.8 6.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain Parvo_NS1 PF01057.17 ORF109060 - 0.22 10.6 0.0 0.59 9.2 0.0 1.6 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 Ammonium_transp PF00909.21 ORF108000 - 7.2e-116 387.2 25.3 8.4e-116 386.9 25.3 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family RCC1_2 PF13540.6 NODE_8332_length_1472_cov_357.476688_g6127_i0reverse_frame_2 - 3.7e-17 61.6 43.6 0.11 12.3 0.3 10.3 10 0 0 10 10 10 9 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_8332_length_1472_cov_357.476688_g6127_i0reverse_frame_2 - 1.3e-06 28.9 3.5 38 4.8 0.0 8.2 8 2 2 10 10 10 0 Spectrin repeat PH_TFIIH PF08567.11 NODE_8332_length_1472_cov_357.476688_g6127_i0reverse_frame_2 - 1.7e-06 28.3 1.8 8.4 6.8 0.0 6.0 4 1 2 6 6 6 1 TFIIH p62 subunit, N-terminal domain DUF155 PF02582.14 NODE_8332_length_1472_cov_357.476688_g6127_i0reverse_frame_2 - 9.6e-06 25.8 13.8 14 5.8 0.0 8.8 7 3 0 7 7 7 1 Uncharacterised ACR, YagE family COG1723 Yuri_gagarin PF15934.5 NODE_8332_length_1472_cov_357.476688_g6127_i0reverse_frame_2 - 0.017 15.0 0.0 3.3 7.5 0.0 3.3 3 0 0 3 3 3 0 Yuri gagarin Inhibitor_I68 PF10468.9 NODE_8332_length_1472_cov_357.476688_g6127_i0reverse_frame_2 - 0.03 14.7 0.1 7.5 7.0 0.0 3.5 2 1 2 4 4 4 0 Carboxypeptidase inhibitor I68 XRCC1_N PF01834.16 NODE_8332_length_1472_cov_357.476688_g6127_i0reverse_frame_2 - 0.12 12.3 5.8 81 3.2 0.0 5.5 2 1 3 7 7 7 0 XRCC1 N terminal domain DUF2220 PF09983.9 NODE_8332_length_1472_cov_357.476688_g6127_i0reverse_frame_2 - 0.91 8.9 5.5 27 4.1 0.2 4.0 3 1 1 4 4 4 0 Uncharacterized protein conserved in bacteria C-term(DUF2220) NPV_P10 PF05531.12 NODE_8332_length_1472_cov_357.476688_g6127_i0reverse_frame_2 - 5.9 7.4 12.1 54 4.4 1.7 5.9 8 1 1 9 9 9 0 Nucleopolyhedrovirus P10 protein zf-A20 PF01754.16 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_3 - 0.032 14.2 1.5 11 6.1 0.1 2.8 2 0 0 2 2 2 0 A20-like zinc finger EP400_N PF15790.5 NODE_8326_length_1472_cov_4881.728601_g6123_i0reverse_frame_2 - 0.025 13.4 9.2 0.67 8.7 1.3 2.4 2 0 0 2 2 2 0 E1A-binding protein p400, N-terminal ATP-synt_ab PF00006.25 ORF71237 - 2.1e-61 207.3 0.0 3.6e-61 206.5 0.0 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 ORF71237 - 1.4e-21 76.8 1.9 3e-21 75.7 1.9 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA PF00004.29 ORF71237 - 0.014 15.9 0.0 0.42 11.0 0.0 2.4 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 ORF71237 - 0.039 13.1 0.1 0.068 12.3 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain RsgA_GTPase PF03193.16 ORF71237 - 0.039 13.8 0.0 0.081 12.8 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase ATPase_2 PF01637.18 ORF71237 - 0.045 13.7 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ATPase PF06745.13 ORF71237 - 0.045 13.1 0.1 0.079 12.3 0.1 1.4 1 0 0 1 1 1 0 KaiC ABC_tran PF00005.27 ORF71237 - 0.064 13.8 0.1 0.7 10.4 0.1 2.3 2 0 0 2 2 2 0 ABC transporter YdaS_antitoxin PF15943.5 ORF71237 - 0.088 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT AAA_19 PF13245.6 ORF71237 - 0.09 13.1 0.5 0.28 11.5 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF71237 - 0.11 12.9 0.0 0.23 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 ORF71237 - 0.16 11.9 0.0 0.37 10.7 0.0 1.6 1 0 0 1 1 1 0 NACHT domain ZZ PF00569.17 ORF70796 - 7.6e-09 35.2 3.9 1.9e-08 33.9 3.9 1.7 1 0 0 1 1 1 1 Zinc finger, ZZ type WW PF00397.26 ORF70796 - 1.4e-08 34.7 0.1 2.9e-08 33.7 0.1 1.6 1 0 0 1 1 1 1 WW domain Glyco_hyd_101C PF17451.2 ORF70796 - 0.07 13.4 0.3 0.07 13.4 0.3 2.2 2 1 0 2 2 2 0 Glycosyl hydrolase 101 beta sandwich domain Macoilin PF09726.9 ORF70796 - 3.5 6.1 18.0 5.7 5.4 18.0 1.3 1 0 0 1 1 1 0 Macoilin family FtsX_ECD PF18075.1 ORF70098 - 0.26 11.9 6.4 0.1 13.2 2.6 2.4 2 0 0 2 2 2 0 FtsX extracellular domain Sec23_trunk PF04811.15 ORF69089 - 6.5e-10 39.0 0.0 1.8e-09 37.5 0.0 1.8 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Img2 PF05046.14 ORF69089 - 0.013 15.8 0.1 0.53 10.6 0.1 3.0 2 0 0 2 2 2 0 Mitochondrial large subunit ribosomal protein (Img2) ShK PF01549.24 ORF57998 - 3.6 8.2 15.1 3.6 8.2 2.1 3.1 3 0 0 3 3 3 0 ShK domain-like Retrotran_gag_2 PF14223.6 ORF52542 - 0.042 13.5 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type Pyr_redox_2 PF07992.14 ORF42042 - 1.2e-76 257.8 0.9 2.1e-76 256.9 0.9 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF42042 - 3.6e-42 143.1 0.2 7.9e-42 142.0 0.2 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF42042 - 1.8e-18 66.9 9.7 2.8e-18 66.2 0.1 3.5 4 1 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 ORF42042 - 9.5e-09 35.1 0.1 6.2e-08 32.4 0.0 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF42042 - 1.3e-07 31.0 5.3 1.6e-06 27.5 5.2 2.5 1 1 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 ORF42042 - 4e-06 26.2 6.0 0.00023 20.4 0.3 3.4 4 1 1 5 5 5 2 FAD binding domain NAD_binding_8 PF13450.6 ORF42042 - 7.3e-06 26.1 3.4 0.0034 17.6 0.5 3.2 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 ORF42042 - 8.9e-06 25.2 11.3 0.00013 21.3 0.9 3.5 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF42042 - 3.6e-05 22.7 2.6 0.0084 14.9 0.1 3.8 3 1 1 4 4 4 1 HI0933-like protein K_oxygenase PF13434.6 ORF42042 - 0.00038 19.7 0.2 0.018 14.2 0.0 2.5 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 ORF42042 - 0.001 18.4 0.5 0.18 11.1 0.0 2.7 3 0 0 3 3 3 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 ORF42042 - 0.0013 18.0 0.3 0.0079 15.5 0.0 2.1 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 ORF42042 - 0.0087 15.3 8.1 0.6 9.3 0.5 3.4 2 1 0 2 2 2 1 FAD binding domain DUF4857 PF16149.5 ORF42042 - 0.025 13.9 0.0 0.043 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4857) 3HCDH_N PF02737.18 ORF42042 - 0.2 11.5 0.0 0.2 11.5 0.0 2.1 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 ORF42042 - 0.28 10.2 0.4 12 4.9 0.0 3.0 2 1 0 3 3 3 0 Lycopene cyclase protein DAO PF01266.24 ORF42042 - 0.29 10.6 6.2 3.2 7.3 0.3 3.4 4 0 0 4 4 4 0 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 ORF42042 - 0.45 10.1 3.7 5.1 6.6 0.0 2.7 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TPR_1 PF00515.28 ORF33784 - 4.6e-26 89.5 18.1 3.1e-08 33.1 2.4 4.7 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF33784 - 2.5e-21 74.0 13.6 2.9e-06 26.9 1.7 4.6 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF33784 - 1.1e-15 57.0 16.0 3.6e-08 32.9 0.3 4.4 2 1 2 4 4 4 2 TPR repeat TPR_8 PF13181.6 ORF33784 - 6.7e-14 50.9 25.6 6.2e-05 22.9 2.0 5.1 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF33784 - 9.1e-09 35.5 6.5 9.7e-05 22.6 0.2 3.9 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF33784 - 1.6e-07 30.9 4.2 0.45 10.7 0.2 4.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF33784 - 2.2e-07 30.9 0.0 0.0003 20.9 0.0 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF33784 - 5.2e-07 30.0 0.0 0.2 12.5 0.0 4.4 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF33784 - 6.2e-07 29.4 8.7 0.006 16.9 0.8 3.3 4 0 0 4 4 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF33784 - 8.9e-06 26.3 0.0 0.067 13.9 0.0 3.1 2 1 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF33784 - 1.1e-05 25.9 1.5 0.39 11.2 0.2 3.5 2 1 1 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF33784 - 0.00013 22.1 5.9 0.00013 22.1 5.9 2.1 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 ORF33784 - 0.00014 22.3 8.5 0.079 13.6 0.6 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF33784 - 0.00038 20.2 6.1 0.55 10.2 0.2 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat DUF5113 PF17140.4 ORF33784 - 0.0095 15.7 4.5 0.87 9.4 2.2 2.7 2 1 0 2 2 2 1 Domain of unknown function (DUF5113) TPR_MalT PF17874.1 ORF33784 - 0.18 11.2 0.3 1.8 7.9 0.1 2.1 2 0 0 2 2 2 0 MalT-like TPR region RdDM_RDM1 PF09187.10 ORF33784 - 0.97 9.5 5.8 0.64 10.1 0.6 2.9 3 1 0 3 3 3 0 RNA-directed DNA methylation 1 Complex1_49kDa PF00346.19 ORF32489 - 8e-48 162.9 0.0 9.9e-35 119.9 0.1 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 ORF32489 - 2.1e-20 73.5 0.2 6.5e-20 72.0 0.2 1.8 2 0 0 2 2 2 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NiFeSe_Hases PF00374.19 ORF32489 - 1.4e-14 54.0 4.0 1.6e-13 50.4 0.1 3.2 4 0 0 4 4 4 2 Nickel-dependent hydrogenase DNA_alkylation PF08713.11 ORF32489 - 0.072 12.8 0.0 2.1 8.0 0.0 2.2 2 0 0 2 2 2 0 DNA alkylation repair enzyme Aldedh PF00171.22 ORF25928 - 3.8e-179 596.0 0.1 4.3e-179 595.9 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF4456 PF14644.6 ORF2339 - 5.5e-20 72.0 2.5 5.5e-20 72.0 2.5 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4456) Cor1 PF04803.12 ORF2339 - 3.4 7.9 9.8 1.1 9.4 0.3 3.5 4 1 0 4 4 4 0 Cor1/Xlr/Xmr conserved region Catalase PF00199.19 ORF111481 - 2.2e-193 642.6 0.3 2.7e-193 642.3 0.3 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 ORF111481 - 1.8e-21 76.1 0.0 6.6e-21 74.3 0.0 1.9 2 0 0 2 2 2 1 Catalase-related immune-responsive Pyrophosphatase PF00719.19 ORF99131 - 1.9e-31 109.0 0.0 2.6e-31 108.6 0.0 1.2 1 0 0 1 1 1 1 Inorganic pyrophosphatase Toprim PF01751.22 ORF98089 - 0.21 11.8 0.0 0.37 11.1 0.0 1.4 1 0 0 1 1 1 0 Toprim domain DDE_Tnp_1_7 PF13843.6 ORF91840 - 0.051 12.9 0.1 0.08 12.2 0.1 1.2 1 0 0 1 1 1 0 Transposase IS4 Snapin_Pallidin PF14712.6 ORF91840 - 0.69 10.4 7.3 0.34 11.4 0.2 3.5 2 2 2 4 4 4 0 Snapin/Pallidin DUF3584 PF12128.8 ORF91840 - 0.76 7.2 14.8 0.23 9.0 10.0 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 ORF91840 - 0.9 9.4 21.7 0.25 11.2 13.6 2.7 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain BshC PF10079.9 ORF91840 - 2.3 6.9 8.5 11 4.7 0.1 2.3 2 1 0 2 2 2 0 Bacillithiol biosynthesis BshC Exonuc_VII_L PF02601.15 ORF91840 - 6.2 6.3 11.9 49 3.4 12.2 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit CC2-LZ PF16516.5 ORF91840 - 6.5 7.2 9.3 2.1 8.8 0.5 3.4 2 2 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Fzo_mitofusin PF04799.13 ORF91840 - 6.8 6.2 6.8 2 8.0 2.3 2.3 2 1 1 3 3 3 0 fzo-like conserved region DUF3935 PF13071.6 ORF8771 - 0.11 13.1 0.1 0.23 12.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3935) TPR_7 PF13176.6 ORF86288 - 0.00016 21.4 0.2 0.089 12.9 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF86288 - 0.0016 18.5 0.9 0.061 13.6 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat Clathrin PF00637.20 ORF86288 - 0.013 15.4 2.1 0.068 13.0 0.1 3.1 4 0 0 4 4 4 0 Region in Clathrin and VPS TPR_2 PF07719.17 ORF86288 - 0.069 13.3 0.1 17 5.8 0.0 4.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF86288 - 0.095 13.4 0.2 19 6.2 0.0 4.6 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF86288 - 1.6 8.7 4.4 7.8 6.5 0.0 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat Sec1 PF00995.23 ORF392 - 3e-48 165.5 0.0 6.3e-48 164.4 0.0 1.5 1 1 0 1 1 1 1 Sec1 family WI12 PF07107.11 ORF392 - 0.0019 18.3 0.3 0.0033 17.5 0.3 1.4 1 0 0 1 1 1 1 Wound-induced protein WI12 AAA_33 PF13671.6 ORF28347 - 5.1e-10 39.7 0.4 3.9e-09 36.8 0.0 2.5 2 1 0 2 2 2 1 AAA domain LigT_PEase PF02834.16 ORF28347 - 0.00013 22.1 0.0 0.25 11.5 0.0 3.2 4 0 0 4 4 4 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 ORF28347 - 0.00041 20.3 0.1 0.027 14.4 0.0 2.6 3 0 0 3 3 3 1 2'-5' RNA ligase superfamily Rad17 PF03215.15 ORF28347 - 0.00068 19.6 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain Zeta_toxin PF06414.12 ORF28347 - 0.0096 15.2 0.1 0.031 13.5 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin AAA_28 PF13521.6 ORF28347 - 0.052 13.8 0.2 2.2 8.5 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF28347 - 0.054 13.9 0.2 0.18 12.2 0.0 2.0 2 1 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 ORF28347 - 0.091 13.3 0.0 0.21 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF28347 - 0.11 12.9 0.0 0.24 11.8 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Peptidase_M24 PF00557.24 ORF21368 - 2e-45 155.1 0.0 2.8e-45 154.6 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 SPT6_acidic PF14632.6 ORF21368 - 0.05 14.2 14.5 0.69 10.5 0.6 2.6 2 0 0 2 2 2 0 Acidic N-terminal SPT6 RNase_E_G PF10150.9 ORF19081 - 6.5e-102 340.6 0.9 9.2e-102 340.1 0.5 1.4 2 0 0 2 2 2 1 Ribonuclease E/G family S1 PF00575.23 ORF19081 - 2.3e-07 31.0 0.3 1.6e-06 28.4 0.0 2.3 2 0 0 2 2 2 1 S1 RNA binding domain HARE-HTH PF05066.13 ORF19081 - 0.067 13.6 0.0 0.6 10.5 0.0 2.5 2 0 0 2 2 2 0 HB1, ASXL, restriction endonuclease HTH domain Ion_trans PF00520.31 ORF109858 - 8.5e-11 41.5 0.7 1.1e-10 41.2 0.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF109858 - 6e-09 36.2 1.0 2.3e-08 34.3 0.8 2.1 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF109858 - 2.2e-07 29.9 0.5 0.012 15.1 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF109858 - 4.9e-06 26.1 0.7 0.032 14.2 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF109858 - 2.7e-05 23.9 2.0 0.028 14.2 0.3 2.9 1 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF109858 - 0.00073 18.9 0.1 0.56 9.8 0.1 3.0 3 0 0 3 3 3 2 EF hand GyrB_insert PF18053.1 ORF107669 - 2.8e-56 190.0 0.1 4.9e-56 189.2 0.1 1.4 1 0 0 1 1 1 1 DNA gyrase B subunit insert domain DNA_gyraseB_C PF00986.21 ORF107669 - 2.1e-31 107.9 0.2 6.1e-31 106.4 0.2 1.9 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus DNA_gyraseB PF00204.25 ORF107669 - 6.7e-31 107.1 0.3 1.3e-30 106.1 0.3 1.5 1 0 0 1 1 1 1 DNA gyrase B Toprim PF01751.22 ORF107669 - 3.4e-14 52.9 0.0 1.2e-13 51.2 0.0 1.9 1 0 0 1 1 1 1 Toprim domain Spindle_Spc25 PF08234.12 ORF107669 - 0.058 13.6 0.0 0.19 12.0 0.0 1.9 1 0 0 1 1 1 0 Chromosome segregation protein Spc25 DUF3377 PF11857.8 NODE_8418_length_1467_cov_71.379190_g6192_i0reverse_frame_2 - 0.1 12.6 0.0 0.35 10.8 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) Nup54 PF13874.6 NODE_8418_length_1467_cov_71.379190_g6192_i0reverse_frame_2 - 0.1 12.7 1.2 0.18 11.9 1.2 1.3 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 DUF5527 PF17665.1 NODE_8418_length_1467_cov_71.379190_g6192_i0reverse_frame_2 - 0.16 11.5 0.1 0.94 9.0 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5527) zf-ribbon_3 PF13248.6 NODE_8418_length_1467_cov_71.379190_g6192_i0forward_frame_3 - 0.17 11.3 1.6 0.58 9.6 1.6 1.9 1 0 0 1 1 1 0 zinc-ribbon domain PKcGMP_CC PF16808.5 ORF55705 - 0.15 11.9 0.6 0.37 10.7 0.6 1.7 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase YkyA PF10368.9 ORF5216 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF5216 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF5216 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF4525 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF4525 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF4525 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Kinesin PF00225.23 ORF33446 - 1.6e-63 214.6 0.1 1.6e-63 214.6 0.1 1.5 2 0 0 2 2 2 1 Kinesin motor domain DUF1043 PF06295.12 ORF33446 - 0.093 12.7 3.0 0.1 12.6 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1043) NPV_P10 PF05531.12 ORF33446 - 0.63 10.6 3.6 13 6.3 0.0 3.3 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.12 ORF33446 - 3 7.9 6.1 1.2 9.2 0.5 3.0 4 0 0 4 4 4 0 Protein of unknown function (DUF1664) YkyA PF10368.9 ORF28029 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF28029 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF28029 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF17920 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF17920 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF17920 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Mannitol_dh_C PF08125.13 ORF109709 - 6.9e-71 238.6 0.0 1.1e-70 237.9 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 ORF109709 - 1.4e-27 96.8 0.1 2.6e-27 95.8 0.1 1.5 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain 3HCDH_N PF02737.18 ORF109709 - 0.022 14.7 0.3 0.059 13.3 0.3 1.7 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AfaD PF05775.12 ORF109709 - 0.12 12.8 0.1 0.27 11.7 0.1 1.6 1 0 0 1 1 1 0 Enterobacteria AfaD invasin protein YkyA PF10368.9 ORF100302 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF100302 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF100302 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor HD PF01966.22 ORF96185 - 1e-12 48.4 0.0 1.9e-12 47.5 0.0 1.5 1 0 0 1 1 1 1 HD domain PDEase_I PF00233.19 ORF96185 - 0.03 14.1 0.1 0.058 13.1 0.1 1.5 1 0 0 1 1 1 0 3'5'-cyclic nucleotide phosphodiesterase SIX1_SD PF16878.5 ORF96185 - 0.034 14.7 0.1 0.075 13.6 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator, SIX1, N-terminal SD domain HD_6 PF18019.1 ORF96185 - 0.18 11.9 0.1 0.32 11.1 0.1 1.3 1 0 0 1 1 1 0 HD domain Na_sulph_symp PF00939.19 ORF91009 - 2e-186 620.6 38.9 2.3e-186 620.5 38.9 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 ORF91009 - 4.5e-18 65.5 37.8 4.5e-18 65.5 37.8 2.3 1 1 1 2 2 2 1 Citrate transporter LRR_6 PF13516.6 ORF88735 - 3.1e-15 54.9 29.2 0.016 15.2 0.1 11.9 12 0 0 12 12 12 6 Leucine Rich repeat FNIP PF05725.12 ORF88735 - 0.008 16.3 1.8 89 3.4 0.0 6.2 8 0 0 8 8 8 1 FNIP Repeat UBX PF00789.20 ORF74415 - 1.2e-06 28.6 0.1 6.9e-06 26.2 0.0 2.3 3 0 0 3 3 3 1 UBX domain Thioredoxin_7 PF13899.6 ORF74415 - 6e-05 23.1 0.4 0.00079 19.6 0.0 2.8 3 1 0 3 3 3 1 Thioredoxin-like UBA_4 PF14555.6 ORF74415 - 6.1e-05 22.7 1.6 9.4e-05 22.2 0.4 1.9 2 0 0 2 2 2 1 UBA-like domain PorA PF11271.8 ORF74415 - 0.00034 20.0 1.6 0.00051 19.4 1.6 1.2 1 0 0 1 1 1 1 Porin PorA DUF61 PF01886.16 ORF74415 - 0.0045 17.0 1.7 0.38 10.8 0.0 2.5 2 0 0 2 2 2 1 Protein of unknown function DUF61 TAP_C PF03943.13 ORF74415 - 0.0055 16.3 2.5 0.0063 16.1 0.1 2.3 3 0 0 3 3 3 1 TAP C-terminal domain G5 PF07501.12 ORF74415 - 0.41 11.1 4.1 1.1 9.7 0.0 3.1 2 1 1 3 3 3 0 G5 domain AIF-MLS PF14962.6 ORF74415 - 1.5 8.7 6.2 3 7.8 6.2 1.4 1 0 0 1 1 1 0 Mitochondria Localisation Sequence Ank_2 PF12796.7 ORF66279 - 7.1e-38 129.1 14.5 6.8e-12 45.8 0.1 4.3 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF66279 - 1.8e-27 92.3 14.6 0.00021 21.5 0.1 8.2 8 0 0 8 8 8 6 Ankyrin repeat Ank PF00023.30 ORF66279 - 2.4e-25 87.8 18.1 4.8e-05 23.6 0.2 7.6 7 0 0 7 7 7 6 Ankyrin repeat Ank_4 PF13637.6 ORF66279 - 5.8e-22 77.8 27.0 1.8e-07 31.5 0.4 5.8 2 1 4 6 6 6 6 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF66279 - 8e-21 73.8 19.9 5.3e-06 26.6 0.2 6.8 3 1 4 7 7 7 5 Ankyrin repeats (many copies) EF-hand_5 PF13202.6 ORF66279 - 2.2e-13 49.0 0.1 8.3e-06 25.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 ORF66279 - 1.7e-09 36.5 0.0 0.0017 17.8 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF66279 - 1.2e-08 35.2 0.3 1.6e-06 28.5 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF66279 - 2.7e-07 30.0 0.1 0.038 13.9 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF66279 - 9.3e-06 25.4 0.0 0.12 12.2 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair SlyX PF04102.12 ORF6349 - 0.0064 17.1 0.8 0.0064 17.1 0.8 5.4 3 1 3 6 6 6 1 SlyX DivIC PF04977.15 ORF6349 - 0.014 15.2 1.0 0.014 15.2 1.0 6.2 2 2 6 8 8 8 0 Septum formation initiator GAS2 PF02187.17 ORF6349 - 0.02 14.9 0.0 0.052 13.6 0.0 1.7 1 0 0 1 1 1 0 Growth-Arrest-Specific Protein 2 Domain bZIP_1 PF00170.21 ORF6349 - 0.097 12.8 0.3 0.097 12.8 0.3 5.9 4 3 0 4 4 4 0 bZIP transcription factor NYD-SP28_assoc PF14775.6 ORF6349 - 0.39 10.8 5.0 22 5.3 1.2 3.3 2 0 0 2 2 2 0 Sperm tail C-terminal domain ATPase PF06745.13 ORF6349 - 0.64 9.3 11.8 0.11 11.9 5.9 2.4 1 1 1 2 2 2 0 KaiC PKcGMP_CC PF16808.5 ORF6349 - 1.4 8.9 0.0 0.41 10.5 0.5 5.6 6 1 2 8 8 8 0 Coiled-coil N-terminus of cGMP-dependent protein kinase YkyA PF10368.9 ORF44979 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF44979 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF44979 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Glyco_hydro_15 PF00723.21 ORF29935 - 8.2e-32 110.6 0.1 2.4e-31 109.0 0.1 1.7 1 1 0 1 1 1 1 Glycosyl hydrolases family 15 Trefoil PF00088.18 ORF29935 - 1.3e-09 37.8 8.3 2.3e-09 37.0 8.3 1.5 1 0 0 1 1 1 1 Trefoil (P-type) domain PH_14 PF17787.1 ORF29935 - 0.099 12.5 0.0 0.31 10.9 0.0 1.8 2 0 0 2 2 2 0 PH domain Vasohibin PF14822.6 ORF2522 - 8.6e-05 21.9 0.0 0.00016 20.9 0.0 1.3 1 0 0 1 1 1 1 Vasohibin AUX_IAA PF02309.16 ORF2522 - 0.068 13.0 0.2 0.12 12.2 0.2 1.4 1 0 0 1 1 1 0 AUX/IAA family p450 PF00067.22 ORF24332 - 9.6e-48 163.1 0.0 4.9e-47 160.7 0.0 1.8 1 1 0 1 1 1 1 Cytochrome P450 HEAT_2 PF13646.6 ORF16191 - 3.5e-47 158.7 30.7 4.4e-09 36.6 1.4 7.6 2 2 3 7 7 7 7 HEAT repeats HEAT PF02985.22 ORF16191 - 1.5e-35 118.2 30.2 0.016 15.5 0.0 13.2 14 0 0 14 14 12 12 HEAT repeat HEAT_EZ PF13513.6 ORF16191 - 1.6e-19 70.0 34.2 5.7e-05 23.5 0.2 10.1 7 4 3 10 10 10 5 HEAT-like repeat Cnd1 PF12717.7 ORF16191 - 4.2e-19 69.1 1.9 0.00049 20.2 0.0 7.6 3 2 4 7 7 7 6 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 ORF16191 - 5.1e-12 45.1 3.3 0.014 13.9 0.1 5.3 3 2 0 4 4 4 4 Adaptin N terminal region Cohesin_HEAT PF12765.7 ORF16191 - 5e-06 26.7 5.7 0.018 15.3 0.1 4.9 5 0 0 5 5 5 2 HEAT repeat associated with sister chromatid cohesion HEAT_PBS PF03130.16 ORF16191 - 1.9e-05 24.9 46.7 0.15 12.8 0.0 12.0 12 2 0 12 12 12 1 PBS lyase HEAT-like repeat Vac14_Fab1_bd PF12755.7 ORF16191 - 0.00045 20.8 0.8 18 6.0 0.3 4.7 2 2 4 6 6 6 0 Vacuolar 14 Fab1-binding region Nipped-B_C PF12830.7 ORF16191 - 0.001 19.0 0.5 0.032 14.2 0.0 3.1 3 1 1 4 4 4 1 Sister chromatid cohesion C-terminus DUF4042 PF13251.6 ORF16191 - 0.0034 17.1 10.7 6.5 6.4 0.0 6.6 3 2 4 7 7 7 1 Domain of unknown function (DUF4042) ERAP1_C PF11838.8 ORF16191 - 0.0073 15.9 1.3 2.1 7.8 0.3 2.7 2 2 0 2 2 2 2 ERAP1-like C-terminal domain CLASP_N PF12348.8 ORF16191 - 0.0081 15.7 0.2 1.4 8.4 0.0 3.9 2 2 0 3 3 3 1 CLASP N terminal V-ATPase_H_C PF11698.8 ORF16191 - 0.048 13.8 0.7 12 6.0 0.2 4.1 4 1 1 5 5 5 0 V-ATPase subunit H Arm PF00514.23 ORF16191 - 0.062 13.4 14.9 44 4.3 0.1 7.9 8 1 1 9 9 9 0 Armadillo/beta-catenin-like repeat Glyco_hydro_15 PF00723.21 ORF111219 - 2.2e-31 109.1 0.2 8.7e-31 107.2 0.2 1.9 1 1 0 1 1 1 1 Glycosyl hydrolases family 15 Trefoil PF00088.18 ORF111219 - 1.3e-09 37.8 8.3 2.3e-09 37.0 8.3 1.4 1 0 0 1 1 1 1 Trefoil (P-type) domain PH_14 PF17787.1 ORF111219 - 0.019 14.8 0.0 0.057 13.3 0.0 1.7 2 0 0 2 2 2 0 PH domain ENTH PF01417.20 ORF102254 - 6.4e-29 100.5 0.1 1.4e-28 99.5 0.0 1.6 2 0 0 2 2 2 1 ENTH domain ANTH PF07651.16 ORF102254 - 0.011 14.8 0.0 0.016 14.2 0.0 1.2 1 0 0 1 1 1 0 ANTH domain RicinB_lectin_2 PF14200.6 ORF91518 - 1.3 9.8 6.6 0.92 10.3 0.4 2.9 3 0 0 3 3 3 0 Ricin-type beta-trefoil lectin domain-like CcdA PF07362.12 ORF86567 - 1.2 9.6 3.1 10 6.7 0.1 3.7 5 0 0 5 5 5 0 Post-segregation antitoxin CcdA LRR_6 PF13516.6 ORF86567 - 1.8 8.8 8.2 4.3 7.6 0.4 4.6 5 0 0 5 5 5 0 Leucine Rich repeat PARP PF00644.20 ORF83890 - 0.00074 19.2 0.0 0.0013 18.4 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain PARP PF00644.20 ORF75399 - 0.00074 19.2 0.0 0.0013 18.4 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Mannitol_dh_C PF08125.13 ORF70125 - 3.6e-101 337.8 0.0 5e-101 337.3 0.0 1.2 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 ORF70125 - 5e-54 182.6 0.0 7.8e-54 181.9 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain Sulfate_transp PF00916.20 ORF6987 - 5.1e-08 32.1 2.8 7.1e-08 31.6 2.8 1.2 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 ORF6987 - 0.001 18.7 0.0 0.0019 17.8 0.0 1.4 1 0 0 1 1 1 1 STAS domain Folliculin PF11704.8 ORF53017 - 0.094 12.6 0.5 0.23 11.3 0.3 1.7 2 0 0 2 2 2 0 Vesicle coat protein involved in Golgi to plasma membrane transport MFS_1 PF07690.16 ORF30111 - 0.00031 19.8 6.4 0.00031 19.8 6.4 3.5 1 1 1 3 3 3 1 Major Facilitator Superfamily PARP PF00644.20 ORF21124 - 0.00074 19.2 0.0 0.0013 18.4 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DUF5525 PF17663.1 ORF17804 - 0.56 8.2 4.0 0.78 7.7 4.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5525) DUF5525 PF17663.1 ORF1320 - 0.56 8.2 4.0 0.78 7.7 4.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5525) Kelch_3 PF13415.6 ORF101403 - 3.6e-11 43.1 4.9 0.013 15.8 0.0 5.5 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF101403 - 3.1e-09 36.7 1.4 0.0015 18.5 0.0 4.0 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF101403 - 1.3e-07 31.7 0.4 0.00041 20.5 0.0 4.8 3 1 2 5 5 5 1 Kelch motif Kelch_2 PF07646.15 ORF101403 - 4.6e-07 29.6 1.1 0.14 12.2 0.0 4.4 5 0 0 5 5 5 2 Kelch motif Kelch_5 PF13854.6 ORF101403 - 1.7e-06 27.8 0.1 0.011 15.7 0.0 4.0 5 0 0 5 5 5 2 Kelch motif Kelch_1 PF01344.25 ORF101403 - 2.2e-06 27.1 0.5 0.00021 20.8 0.0 3.7 5 0 0 5 5 5 1 Kelch motif UDPGT PF00201.18 ORF98831 - 8.3e-12 44.6 0.1 2.4e-11 43.1 0.1 1.6 1 1 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF98831 - 3.9e-11 43.2 0.0 6.5e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Epimerase_2 PF02350.19 ORF98831 - 0.0095 14.8 0.0 0.014 14.3 0.0 1.1 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.12 ORF98831 - 0.018 14.2 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF354) SAC3_GANP PF03399.16 ORF84966 - 3.9e-07 29.8 0.1 3.2e-05 23.5 0.1 2.3 1 1 0 1 1 1 1 SAC3/GANP family Carb_anhydrase PF00194.21 ORF83758 - 2.2e-08 33.9 0.0 4.3e-05 23.2 0.0 2.9 2 1 0 3 3 3 2 Eukaryotic-type carbonic anhydrase DUF2046 PF09755.9 ORF83758 - 0.045 13.0 6.3 0.05 12.8 5.3 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) UPF0231 PF06062.11 ORF83758 - 0.075 13.3 0.7 0.21 11.9 0.7 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0231) Syntaxin-6_N PF09177.11 ORF83758 - 0.15 12.6 4.8 0.16 12.6 0.8 2.5 2 1 0 2 2 2 0 Syntaxin 6, N-terminal YabA PF06156.13 ORF83758 - 0.34 11.6 5.3 0.47 11.1 0.6 2.5 2 1 1 3 3 3 0 Initiation control protein YabA GIT_CC PF16559.5 ORF83758 - 1 9.3 8.7 0.25 11.2 2.9 2.6 3 0 0 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor FapA PF03961.13 ORF83758 - 1.2 7.7 3.0 3.3 6.2 0.1 2.0 2 0 0 2 2 2 0 Flagellar Assembly Protein A DivIC PF04977.15 ORF83758 - 1.3 8.9 5.7 4.5 7.1 0.9 2.6 2 0 0 2 2 2 0 Septum formation initiator SKA2 PF16740.5 ORF83758 - 1.4 8.8 10.2 1.1 9.1 2.6 2.6 3 0 0 3 3 3 0 Spindle and kinetochore-associated protein 2 Fungal_TACC PF12709.7 ORF83758 - 1.6 9.3 6.2 2.2 8.8 2.3 2.3 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Lzipper-MIP1 PF14389.6 ORF83758 - 1.6 9.1 10.8 12 6.3 4.2 3.2 3 0 0 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 Csm1_N PF18504.1 ORF83758 - 2.7 8.4 8.0 21 5.6 2.5 2.4 2 0 0 2 2 2 0 Csm1 N-terminal domain DUF4140 PF13600.6 ORF83758 - 2.7 8.5 8.5 7.7 7.0 2.4 2.9 3 1 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) ZapB PF06005.12 ORF83758 - 3 8.3 15.8 11 6.5 9.6 2.5 2 0 0 2 2 2 0 Cell division protein ZapB MscS_TM PF12794.7 ORF83758 - 3.1 6.6 7.6 21 3.8 0.0 2.2 1 1 1 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 Seryl_tRNA_N PF02403.22 ORF83758 - 3.4 7.9 7.4 5.7 7.2 0.6 2.3 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Vpu PF00558.19 ORF83758 - 3.8 7.4 4.7 11 5.8 1.4 2.6 2 0 0 2 2 2 0 Vpu protein SOGA PF11365.8 ORF83758 - 3.8 8.7 9.1 14 6.9 0.3 3.1 3 0 0 3 3 3 0 Protein SOGA FlxA PF14282.6 ORF83758 - 5.1 7.2 17.1 14 5.7 12.1 2.3 2 0 0 2 2 2 0 FlxA-like protein Metallophos PF00149.28 ORF82526 - 2e-11 44.8 3.7 2.2e-11 44.6 2.5 1.6 2 1 0 2 2 2 1 Calcineurin-like phosphoesterase PAN_4 PF14295.6 ORF82526 - 6.9e-05 22.7 0.1 0.00028 20.7 0.1 2.1 1 0 0 1 1 1 1 PAN domain PhoD PF09423.10 ORF82526 - 0.00055 19.0 0.2 0.066 12.2 0.1 2.2 2 0 0 2 2 2 2 PhoD-like phosphatase Metallophos_2 PF12850.7 ORF82526 - 0.00056 20.1 0.0 0.024 14.8 0.0 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PAN_1 PF00024.26 ORF82526 - 0.0014 18.6 0.0 0.0033 17.4 0.0 1.6 1 0 0 1 1 1 1 PAN domain AvrRpt-cleavage PF05627.11 ORF82526 - 0.019 14.3 0.1 0.064 12.6 0.1 1.9 1 0 0 1 1 1 0 Cleavage site for pathogenic type III effector avirulence factor Avr NHL PF01436.21 ORF78785 - 2.3e-24 84.1 8.2 1.4e-07 31.2 0.0 5.7 5 1 0 5 5 5 4 NHL repeat SGL PF08450.12 ORF78785 - 7.6e-05 22.4 0.0 0.012 15.2 0.0 2.7 2 1 1 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region DUF5128 PF17170.4 ORF78785 - 0.015 14.4 0.0 27 3.8 0.0 3.7 3 1 0 4 4 4 0 6-bladed beta-propeller DUF3598 PF12204.8 ORF78785 - 0.18 11.3 0.1 0.32 10.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3598) Metallophos PF00149.28 ORF77421 - 1.5e-09 38.6 5.6 2.6e-09 37.9 5.6 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF77421 - 0.0034 18.2 0.1 0.0091 16.8 0.1 1.7 1 0 0 1 1 1 1 Iron/zinc purple acid phosphatase-like protein C UDPGT PF00201.18 ORF75404 - 8.3e-12 44.6 0.1 2.4e-11 43.1 0.1 1.6 1 1 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF75404 - 3.9e-11 43.2 0.0 6.5e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Epimerase_2 PF02350.19 ORF75404 - 0.0095 14.8 0.0 0.014 14.3 0.0 1.1 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.12 ORF75404 - 0.018 14.2 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF354) tRNA-synt_1g PF09334.11 ORF72088 - 7.6e-77 258.7 0.0 1.9e-53 181.6 0.0 2.3 2 1 1 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 ORF72088 - 4.6e-24 84.6 0.0 2.6e-21 75.5 0.1 2.2 1 1 1 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 ORF72088 - 2e-07 30.7 0.0 3.5e-06 26.6 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 ORF72088 - 3.7e-07 30.2 0.1 7.3e-07 29.3 0.1 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 ORF72088 - 0.0011 18.0 0.0 0.0017 17.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1b PF00579.25 ORF72088 - 0.17 11.2 0.0 0.28 10.5 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) HET PF06985.11 ORF69932 - 0.00027 21.3 0.2 0.00071 19.9 0.0 1.6 1 1 1 2 2 2 1 Heterokaryon incompatibility protein (HET) TIR_2 PF13676.6 ORF69932 - 0.016 15.8 0.0 0.032 14.8 0.0 1.5 1 0 0 1 1 1 0 TIR domain RCR PF12273.8 ORF69932 - 0.065 13.9 0.0 0.13 13.0 0.0 1.4 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red Peptidase_U4 PF03419.13 ORF69932 - 0.48 9.7 3.4 0.97 8.7 3.4 1.4 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Glyco_hydro_38N PF01074.22 ORF65429 - 3.2e-80 269.6 7.6 4.9e-80 269.0 7.6 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF65429 - 3.2e-15 56.0 2.8 8.7e-15 54.6 2.8 1.8 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_57 PF03065.15 ORF65429 - 0.00034 19.9 1.7 0.0085 15.3 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.21 ORF65429 - 0.0037 17.2 0.0 0.0073 16.2 0.0 1.6 1 1 0 1 1 1 1 Polysaccharide deacetylase Nucleotid_trans PF03407.16 ORF60072 - 1.8e-06 28.1 0.0 0.00027 21.0 0.0 2.3 2 0 0 2 2 2 2 Nucleotide-diphospho-sugar transferase Helicase_C PF00271.31 ORF51120 - 2.5e-06 27.8 0.0 4.8e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain p450 PF00067.22 ORF44874 - 5.5e-52 177.1 0.6 7.9e-52 176.5 0.6 1.2 1 0 0 1 1 1 1 Cytochrome P450 ATC_hydrolase PF14196.6 ORF44874 - 0.033 15.0 0.5 0.15 12.8 0.1 2.1 2 1 0 2 2 2 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase DUF5547 PF17701.1 ORF44874 - 0.093 12.6 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Glyco_hydro_38N PF01074.22 ORF40346 - 3.2e-80 269.6 7.6 4.9e-80 269.0 7.6 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF40346 - 3.2e-15 56.0 2.8 8.7e-15 54.6 2.8 1.8 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_57 PF03065.15 ORF40346 - 0.00034 19.9 1.7 0.0085 15.3 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.21 ORF40346 - 0.0037 17.2 0.0 0.0073 16.2 0.0 1.6 1 1 0 1 1 1 1 Polysaccharide deacetylase Ank_2 PF12796.7 ORF29760 - 7.1e-18 65.0 3.4 2.3e-05 24.9 0.4 4.7 3 1 2 5 5 5 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF29760 - 1e-11 44.8 3.6 0.0091 16.3 0.1 4.9 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF29760 - 9.4e-11 41.7 8.1 0.00055 20.3 0.0 5.6 5 0 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF29760 - 3e-10 39.4 3.1 0.011 16.2 0.0 5.8 6 0 0 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF29760 - 4.7e-10 39.8 4.4 0.036 14.7 0.3 5.6 3 3 3 6 6 6 4 Ankyrin repeats (many copies) Myb_DNA-binding PF00249.31 ORF1959 - 1.3e-49 166.1 13.4 3.5e-16 59.1 0.1 3.4 3 0 0 3 3 3 3 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF1959 - 5.4e-36 122.6 13.1 9.4e-17 61.0 1.0 3.8 1 1 2 3 3 3 3 Myb-like DNA-binding domain SLIDE PF09111.10 ORF1959 - 1.9e-07 31.1 1.0 0.016 15.3 0.2 4.0 1 1 2 3 3 3 3 SLIDE Myb_DNA-bind_7 PF15963.5 ORF1959 - 5.5e-05 23.0 9.0 0.0035 17.2 1.1 3.6 1 1 2 3 3 3 2 Myb DNA-binding like Rap1_C PF11626.8 ORF1959 - 0.00039 20.5 0.5 7.3 6.8 1.3 4.1 2 1 1 3 3 3 1 TRF2-interacting telomeric protein/Rap1 - C terminal domain Sigma70_r4_2 PF08281.12 ORF1959 - 0.022 14.4 0.0 0.35 10.6 0.0 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 SANT_DAMP1_like PF16282.5 ORF1959 - 0.12 12.5 4.3 6.6 7.0 0.6 3.5 1 1 2 3 3 3 0 SANT/Myb-like domain of DAMP1 RnaseA PF00074.20 ORF1959 - 0.83 10.1 7.3 2.5 8.6 7.3 1.8 1 0 0 1 1 1 0 Pancreatic ribonuclease UPF0547 PF10571.9 ORF14474 - 0.12 12.5 7.4 14 5.8 0.3 4.1 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 PTS_EIIC PF02378.18 ORF1411 - 3.8e-42 144.5 31.6 3.8e-42 144.5 31.6 1.5 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 ORF1411 - 3.7e-15 55.1 0.2 6.1e-15 54.4 0.2 1.4 1 0 0 1 1 1 1 phosphotransferase system, EIIB UDPGT PF00201.18 ORF104598 - 8.3e-12 44.6 0.1 2.4e-11 43.1 0.1 1.6 1 1 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF104598 - 3.9e-11 43.2 0.0 6.5e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Epimerase_2 PF02350.19 ORF104598 - 0.0095 14.8 0.0 0.014 14.3 0.0 1.1 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.12 ORF104598 - 0.018 14.2 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF354) DUF2703 PF10865.8 NODE_8683_length_1451_cov_82.818503_g6382_i0reverse_frame_1 - 0.092 12.9 1.0 0.15 12.2 1.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) YkyA PF10368.9 ORF98636 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF98636 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF98636 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF98440 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF98440 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF98440 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor CitMHS PF03600.16 ORF95120 - 5.5e-29 101.3 27.8 1.2e-20 73.9 25.7 2.1 2 0 0 2 2 2 2 Citrate transporter TrkA_C PF02080.21 ORF95120 - 3.3e-26 90.9 1.3 5.1e-13 48.6 0.1 2.3 2 0 0 2 2 2 2 TrkA-C domain Na_sulph_symp PF00939.19 ORF95120 - 1.1e-13 51.0 27.3 1.8e-11 43.8 19.4 2.9 2 1 1 3 3 3 3 Sodium:sulfate symporter transmembrane region DctM PF06808.12 ORF95120 - 1.2e-06 27.6 23.8 1.2e-06 27.6 23.8 1.8 2 1 0 2 2 2 1 Tripartite ATP-independent periplasmic transporter, DctM component YkyA PF10368.9 ORF94687 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF94687 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF94687 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks16.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks16.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks16.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks16.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- pXO2-72 PF17443.2 ORF42601 - 0.036 14.3 0.1 0.068 13.4 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein pXO2-72 Abhydrolase_1 PF00561.20 ORF42601 - 0.2 11.3 0.0 0.21 11.2 0.0 1.0 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF2572 PF10833.8 ORF42523 - 0.054 13.2 1.4 0.07 12.9 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2572) Acyl_transf_3 PF01757.22 ORF42501 - 1.8e-09 37.1 9.6 2.2e-09 36.9 9.6 1.1 1 0 0 1 1 1 1 Acyltransferase family TrpP PF17099.5 ORF42501 - 0.009 15.8 1.1 0.009 15.8 1.1 1.6 2 0 0 2 2 2 1 Tryptophan transporter TrpP Adeno_IVa2 PF02456.15 ORF42454 - 0.052 12.3 0.1 0.077 11.8 0.1 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein PDZ_1 PF12812.7 ORF40658 - 0.052 13.6 0.0 0.09 12.8 0.0 1.4 1 0 0 1 1 1 0 PDZ-like domain Aldedh PF00171.22 ORF40428 - 1.6e-46 158.8 0.0 1.7e-46 158.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family RNase_P_p30 PF01876.16 ORF39963 - 2.6e-25 89.2 1.2 3.3e-25 88.8 1.2 1.2 1 0 0 1 1 1 1 RNase P subunit p30 SF3A3 PF16837.5 ORF39963 - 0.055 14.0 0.4 0.079 13.5 0.4 1.3 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 DUF4313 PF14190.6 ORF39963 - 0.12 12.4 1.0 1.3 9.1 1.0 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4313) ERGIC_N PF13850.6 ORF37059 - 0.0055 17.0 0.3 0.0075 16.6 0.3 1.3 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF2254 PF10011.9 ORF37059 - 0.01 14.7 0.0 0.01 14.7 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) AA_permease_2 PF13520.6 ORF37059 - 0.01 14.7 0.3 0.011 14.6 0.3 1.1 1 0 0 1 1 1 0 Amino acid permease AAA_11 PF13086.6 ORF3673 - 0.04 13.7 3.9 0.047 13.5 3.9 1.0 1 0 0 1 1 1 0 AAA domain PIN_5 PF08745.11 ORF3673 - 0.11 11.9 0.2 0.12 11.7 0.2 1.1 1 0 0 1 1 1 0 PINc domain ribonuclease DUF2357 PF09823.9 ORF36603 - 0.006 15.9 1.4 0.0072 15.6 1.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2357) TcdB_N PF12918.7 ORF36603 - 5.8 7.3 12.0 7.6 6.9 0.7 2.9 3 1 0 3 3 3 0 TcdB toxin N-terminal helical domain DUF3810 PF12725.7 ORF356 - 3.8e-06 26.5 1.0 4.7e-06 26.2 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3810) BRI3BP PF14965.6 ORF356 - 0.0002 20.9 0.0 0.00031 20.3 0.0 1.3 1 0 0 1 1 1 1 Negative regulator of p53/TP53 HEPN_AbiU2 PF18734.1 ORF356 - 0.00091 18.8 1.2 0.0018 17.8 1.2 1.5 1 1 0 1 1 1 1 AbiU2 TMPIT PF07851.13 ORF356 - 0.0012 18.2 2.4 0.0016 17.8 2.4 1.2 1 0 0 1 1 1 1 TMPIT-like protein THOC7 PF05615.13 ORF356 - 0.0013 19.0 1.6 0.0017 18.6 1.6 1.2 1 0 0 1 1 1 1 Tho complex subunit 7 DUF4472 PF14739.6 ORF356 - 0.003 18.2 1.7 0.0041 17.8 1.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4472) TSC22 PF01166.18 ORF356 - 0.0035 17.6 1.4 0.71 10.2 0.4 2.4 1 1 1 2 2 2 1 TSC-22/dip/bun family Striatin PF08232.12 ORF356 - 0.014 16.0 1.6 0.019 15.6 1.6 1.3 1 0 0 1 1 1 0 Striatin family Spore_III_AF PF09581.10 ORF356 - 0.022 14.8 0.1 0.026 14.6 0.1 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Jnk-SapK_ap_N PF09744.9 ORF356 - 0.024 14.9 1.7 0.024 14.9 1.7 1.5 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 PspA_IM30 PF04012.12 ORF356 - 0.025 14.2 1.8 0.04 13.5 1.7 1.4 1 1 0 1 1 1 0 PspA/IM30 family DivIC PF04977.15 ORF356 - 0.027 14.2 3.2 0.24 11.2 0.8 2.4 1 1 1 2 2 2 0 Septum formation initiator Prefoldin_2 PF01920.20 ORF356 - 0.032 14.2 1.9 0.42 10.6 0.3 2.4 1 1 1 2 2 2 0 Prefoldin subunit Paramyxo_P PF01806.17 ORF356 - 0.035 13.5 0.1 0.045 13.2 0.1 1.2 1 0 0 1 1 1 0 Paramyxovirinae P phosphoprotein C-terminal region DUF4298 PF14131.6 ORF356 - 0.038 14.0 1.6 0.31 11.0 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) LOH1CR12 PF10158.9 ORF356 - 0.038 14.0 0.4 0.055 13.5 0.4 1.3 1 0 0 1 1 1 0 Tumour suppressor protein DUF2408 PF10303.9 ORF356 - 0.039 14.5 0.4 0.043 14.4 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Syntaxin-6_N PF09177.11 ORF356 - 0.041 14.4 2.3 0.65 10.6 0.9 2.1 1 1 1 2 2 2 0 Syntaxin 6, N-terminal RasGAP_C PF03836.15 ORF356 - 0.043 14.0 3.5 0.054 13.6 3.5 1.2 1 0 0 1 1 1 0 RasGAP C-terminus Syntaxin_2 PF14523.6 ORF356 - 0.045 14.1 1.3 0.075 13.4 1.3 1.4 1 1 0 1 1 1 0 Syntaxin-like protein DUF745 PF05335.13 ORF356 - 0.059 13.1 0.4 0.081 12.6 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) Uso1_p115_C PF04871.13 ORF356 - 0.098 13.0 1.8 0.13 12.7 1.8 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region MscS_porin PF12795.7 ORF356 - 0.11 12.0 0.7 0.84 9.1 0.1 2.0 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain DUF4337 PF14235.6 ORF356 - 0.18 11.9 1.9 0.4 10.8 1.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) DUF5082 PF16888.5 ORF356 - 0.18 12.1 4.4 3.6 7.9 4.4 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Myb_DNA-bind_4 PF13837.6 ORF356 - 0.26 11.7 3.8 0.48 10.8 3.6 1.6 1 1 0 1 1 1 0 Myb/SANT-like DNA-binding domain DHHC PF01529.20 ORF3512 - 0.0012 18.9 8.0 0.0017 18.4 8.0 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase EamA PF00892.20 ORF3512 - 0.0065 16.6 3.3 0.0095 16.1 3.3 1.2 1 0 0 1 1 1 1 EamA-like transporter family zf-RING_2 PF13639.6 ORF34823 - 1.9e-12 47.3 8.5 2.7e-12 46.8 8.5 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF34823 - 2.5e-07 30.4 5.1 3.5e-07 30.0 5.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF34823 - 1.3e-06 28.2 6.3 2.1e-06 27.6 6.3 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF34823 - 1.8e-06 27.5 5.9 1.8e-06 27.5 5.9 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF34823 - 4.7e-06 26.4 7.4 7.3e-06 25.8 7.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF34823 - 5.7e-06 26.5 6.7 1e-05 25.7 6.7 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF34823 - 6.2e-06 26.2 4.0 1.3e-05 25.2 4.0 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 ORF34823 - 9.2e-06 25.4 8.2 1.6e-05 24.6 8.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF34823 - 1.6e-05 24.8 6.4 0.00017 21.5 2.5 2.3 2 0 0 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF34823 - 4.3e-05 23.3 6.8 6.6e-05 22.7 6.8 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF34823 - 0.0011 18.5 5.7 0.0019 17.8 5.7 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF34823 - 0.0059 16.7 6.8 0.013 15.6 6.4 1.8 1 1 0 1 1 1 1 RING-variant domain zf-RING_4 PF14570.6 ORF34823 - 0.15 11.8 5.7 0.38 10.6 5.8 1.6 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Rtf2 PF04641.12 ORF34823 - 0.3 10.4 2.2 0.48 9.8 0.8 2.0 1 1 1 2 2 2 0 Rtf2 RING-finger Prok-RING_1 PF14446.6 ORF34823 - 0.34 10.9 7.1 0.73 9.8 3.6 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 PHD PF00628.29 ORF34823 - 0.38 10.7 7.2 0.67 9.9 7.2 1.4 1 0 0 1 1 1 0 PHD-finger zf-C3HC4_4 PF15227.6 ORF34823 - 1.6 9.0 9.4 67 3.8 9.8 2.3 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Helicase_C PF00271.31 ORF33979 - 1.8e-18 66.9 0.0 2.4e-18 66.5 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Ribosomal_L37e PF01907.19 ORF33979 - 0.014 15.5 0.1 0.025 14.8 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L37e Ntox37 PF15535.6 ORF31695 - 0.17 12.4 0.0 0.25 11.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial toxin 37 RDD PF06271.12 ORF31360 - 0.1 12.8 0.6 0.13 12.4 0.6 1.1 1 0 0 1 1 1 0 RDD family Peptidase_M24 PF00557.24 ORF30677 - 5.9e-24 84.9 0.1 6.6e-24 84.8 0.1 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 Cation_ATPase_C PF00689.21 ORF30455 - 0.025 14.3 0.0 0.032 13.9 0.0 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF30455 - 0.04 14.5 0.0 0.075 13.6 0.0 1.4 1 0 0 1 1 1 0 NLRC4 helical domain HD2 NST1 PF13945.6 ORF30455 - 0.063 13.4 1.4 0.083 13.0 1.4 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator FeoB_associated PF12669.7 ORF30455 - 0.13 12.7 0.4 0.21 12.0 0.4 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein FANCI_S1 PF14675.6 ORF29698 - 0.0096 15.5 0.0 0.24 10.9 0.0 2.0 1 1 1 2 2 2 2 FANCI solenoid 1 Cas9-BH PF16593.5 ORF29691 - 2.9 7.7 6.5 0.19 11.5 1.1 1.9 2 1 0 2 2 2 0 Bridge helix of CRISPR-associated endonuclease Cas9 Ribosomal_S8e PF01201.22 ORF29222 - 0.28 11.3 8.5 0.36 11.0 8.5 1.1 1 0 0 1 1 1 0 Ribosomal protein S8e DUF3808 PF10300.9 ORF2885 - 2.5e-16 59.5 0.1 3e-16 59.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3808) TPR_12 PF13424.6 ORF2885 - 0.0036 17.6 0.0 0.0061 16.8 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF2885 - 0.012 16.2 0.6 6.4 7.6 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF2885 - 0.074 12.7 0.2 0.25 11.1 0.0 2.0 2 0 0 2 2 2 0 TPR repeat MAS20 PF02064.15 ORF2885 - 0.11 12.6 0.1 15 5.7 0.0 2.3 2 1 1 3 3 3 0 MAS20 protein import receptor TPR_2 PF07719.17 ORF2885 - 0.24 11.6 2.4 0.52 10.6 0.3 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat Methyltransf_20 PF12147.8 ORF27120 - 3.7e-71 239.8 0.0 4.2e-71 239.6 0.0 1.0 1 0 0 1 1 1 1 Putative methyltransferase NPV_P10 PF05531.12 ORF27046 - 0.05 14.1 1.1 0.05 14.1 1.1 1.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF402 PF04167.13 ORF27046 - 0.11 12.7 0.1 0.17 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF402) Ribosomal_S24e PF01282.19 ORF26808 - 3.2e-26 91.1 0.3 3.2e-26 91.1 0.3 2.0 1 1 1 2 2 2 1 Ribosomal protein S24e Form-deh_trans PF09163.11 ORF26362 - 1.6 8.6 4.8 1 9.2 0.7 2.3 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Herpes_UL87 PF03043.14 ORF25974 - 0.11 10.9 0.7 0.31 9.5 0.7 1.7 1 1 0 1 1 1 0 Herpesvirus UL87 family FKBP_C PF00254.28 ORF23641 - 3e-18 65.9 0.0 3.4e-18 65.7 0.0 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF393 PF04134.12 ORF23005 - 6.2e-16 59.7 0.0 7.7e-16 59.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF393 Cupin_8 PF13621.6 ORF22397 - 4e-05 23.5 0.0 6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Cupin-like domain ECSIT_C PF14784.6 ORF21280 - 0.12 12.7 0.3 0.18 12.2 0.3 1.2 1 0 0 1 1 1 0 C-terminal domain of the ECSIT protein zinc_ribbon_11 PF11682.8 ORF19251 - 4.8e-19 68.6 0.4 5.8e-19 68.4 0.4 1.0 1 0 0 1 1 1 1 Probable zinc-ribbon zinc-ribbon_6 PF10005.9 ORF19251 - 0.0026 18.4 5.3 1.1 9.9 0.0 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zinc-ribbons_6 PF07191.12 ORF19251 - 0.003 17.5 3.6 0.018 15.0 1.5 2.3 2 0 0 2 2 2 1 zinc-ribbons DUF4379 PF14311.6 ORF19251 - 0.026 14.9 3.8 0.17 12.3 0.8 2.4 2 0 0 2 2 2 0 Probable Zinc-ribbon domain HypA PF01155.19 ORF19251 - 0.084 12.9 4.3 0.35 10.9 2.0 2.1 1 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 ORF19251 - 0.11 12.5 8.5 4.5 7.4 4.3 2.3 2 0 0 2 2 2 0 Double zinc ribbon CxC5 PF18718.1 ORF19251 - 4.2 7.5 11.4 0.89 9.7 4.3 2.2 1 1 1 2 2 2 0 CxC5 like cysteine cluster associated with KDZ transposases Ion_trans_2 PF07885.16 ORF19016 - 5.1e-13 48.8 0.9 6.2e-13 48.5 0.9 1.1 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF19016 - 3.4e-09 36.3 0.0 4.1e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Ion transport protein DUF2353 PF09789.9 ORF19016 - 0.071 12.5 0.2 0.077 12.3 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) SUD-M PF11633.8 ORF19016 - 0.086 12.5 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Single-stranded poly(A) binding domain FANCI_HD1 PF14679.6 ORF17285 - 0.041 13.8 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 FANCI helical domain 1 PARP PF00644.20 ORF16499 - 6.3e-09 35.7 1.2 2.5e-08 33.8 1.2 1.8 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DUF4201 PF13870.6 ORF15953 - 0.012 15.4 2.7 0.41 10.4 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) Blo-t-5 PF11642.8 ORF15953 - 0.029 14.3 1.1 0.32 11.0 0.3 2.2 2 0 0 2 2 2 0 Mite allergen Blo t 5 Glyoxalase PF00903.25 ORF14071 - 5.7e-24 84.7 0.0 6.6e-24 84.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF14071 - 2.3e-07 31.0 0.0 1.7e-06 28.3 0.0 1.9 1 1 1 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 ORF14071 - 8.8e-06 26.5 0.0 1.5e-05 25.7 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 ORF14071 - 0.0071 16.3 0.0 0.02 14.8 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase-like domain CppA_N PF14506.6 ORF14071 - 0.02 14.9 0.0 0.039 14.0 0.0 1.5 1 1 0 1 1 1 0 CppA N-terminal RNA_lig_T4_1 PF09511.10 ORF14034 - 7.6e-05 22.7 1.1 9.3e-05 22.4 1.1 1.1 1 0 0 1 1 1 1 RNA ligase LRRFIP PF09738.9 ORF14034 - 0.023 14.2 4.9 0.045 13.2 0.4 2.0 1 1 1 2 2 2 0 LRRFIP family DUF1643 PF07799.12 ORF14034 - 0.024 14.8 0.0 0.029 14.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1643) MHCassoc_trimer PF08831.10 ORF14034 - 0.059 13.4 3.0 0.29 11.2 0.2 2.4 3 0 0 3 3 3 0 Class II MHC-associated invariant chain trimerisation domain Tweety PF04906.13 ORF14034 - 0.11 11.1 0.2 0.14 10.8 0.2 1.1 1 0 0 1 1 1 0 Tweety HTH_56 PF18662.1 ORF14034 - 0.13 12.3 3.4 0.27 11.3 3.3 1.7 1 1 0 1 1 1 0 Cch helix turn helix domain DUF1798 PF08807.10 ORF14034 - 0.35 11.0 5.1 0.52 10.5 0.8 2.6 2 1 1 3 3 3 0 Bacterial domain of unknown function (DUF1798) DHHC PF01529.20 ORF13943 - 0.0012 18.9 8.0 0.0017 18.4 8.0 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase EamA PF00892.20 ORF13943 - 0.0065 16.6 3.3 0.0095 16.1 3.3 1.2 1 0 0 1 1 1 1 EamA-like transporter family Cofilin_ADF PF00241.20 ORF111778 - 4.1e-25 87.9 0.4 5.1e-25 87.6 0.4 1.0 1 0 0 1 1 1 1 Cofilin/tropomyosin-type actin-binding protein Aldo_ket_red PF00248.21 ORF111493 - 1.9e-17 63.4 0.0 2.2e-17 63.2 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family MORN PF02493.20 ORF111423 - 2.4e-07 30.2 3.5 3.2e-07 29.8 0.7 2.6 3 0 0 3 3 3 1 MORN repeat NEMP PF10225.9 ORF111237 - 0.018 14.7 0.1 0.022 14.4 0.1 1.1 1 0 0 1 1 1 0 NEMP family Peptidase_C14 PF00656.22 ORF110160 - 0.0038 17.2 0.0 0.051 13.5 0.0 1.9 2 0 0 2 2 2 2 Caspase domain SKIP_SNW PF02731.15 ORF110009 - 0.011 15.4 0.4 0.014 15.1 0.4 1.2 1 0 0 1 1 1 0 SKIP/SNW domain AAA_assoc_2 PF16193.5 ORF110009 - 0.037 14.4 0.4 0.63 10.4 0.1 2.2 2 0 0 2 2 2 0 AAA C-terminal domain Pkinase PF00069.25 ORF108879 - 6.8e-15 55.1 0.0 9.1e-15 54.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF108879 - 4.9e-06 26.1 0.0 6.2e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_Tyr PF07714.17 ORF108879 - 0.00032 20.1 0.0 0.00043 19.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DnaJ PF00226.31 ORF107862 - 4e-05 23.6 0.3 5.9e-05 23.1 0.3 1.2 1 0 0 1 1 1 1 DnaJ domain FANCI_HD1 PF14679.6 ORF107820 - 0.041 13.8 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 FANCI helical domain 1 SAM_Exu PF18609.1 ORF10770 - 0.043 13.9 1.3 0.043 13.9 1.3 2.1 2 1 0 2 2 2 0 Exuperantia SAM-like domain DUF445 PF04286.12 ORF10770 - 0.075 12.8 9.4 0.076 12.8 9.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF445) CEP209_CC5 PF16574.5 ORF10770 - 0.12 12.5 13.7 0.17 12.0 13.7 1.2 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 FAM117 PF15388.6 ORF10770 - 0.83 9.0 6.3 1 8.7 6.3 1.0 1 0 0 1 1 1 0 Protein Family FAM117 FKS1_dom1 PF14288.6 ORF10770 - 1.3 9.4 5.9 4.3 7.7 5.9 1.8 1 1 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 HIP1_clath_bdg PF16515.5 ORF10770 - 1.5 9.5 14.0 3.2 8.4 7.8 2.5 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 LMBR1 PF04791.16 ORF10770 - 5.2 5.9 10.8 5.8 5.7 10.8 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Pet100 PF09803.9 ORF10770 - 5.2 7.7 8.3 2.8 8.5 1.4 2.4 1 1 0 2 2 2 0 Pet100 YabA PF06156.13 ORF10770 - 6.7 7.4 15.7 0.21 12.2 3.6 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Peptidase_S49_N PF08496.10 ORF10770 - 7.6 6.6 12.9 35 4.4 12.8 1.9 1 1 0 1 1 1 0 Peptidase family S49 N-terminal DUF3810 PF12725.7 ORF107639 - 3.8e-06 26.5 1.0 4.7e-06 26.2 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3810) BRI3BP PF14965.6 ORF107639 - 0.0002 20.9 0.0 0.00031 20.3 0.0 1.3 1 0 0 1 1 1 1 Negative regulator of p53/TP53 HEPN_AbiU2 PF18734.1 ORF107639 - 0.00091 18.8 1.2 0.0018 17.8 1.2 1.5 1 1 0 1 1 1 1 AbiU2 TMPIT PF07851.13 ORF107639 - 0.0012 18.2 2.4 0.0016 17.8 2.4 1.2 1 0 0 1 1 1 1 TMPIT-like protein THOC7 PF05615.13 ORF107639 - 0.0013 19.0 1.6 0.0017 18.6 1.6 1.2 1 0 0 1 1 1 1 Tho complex subunit 7 DUF4472 PF14739.6 ORF107639 - 0.003 18.2 1.7 0.0041 17.8 1.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4472) TSC22 PF01166.18 ORF107639 - 0.0035 17.6 1.4 0.71 10.2 0.4 2.4 1 1 1 2 2 2 1 TSC-22/dip/bun family Striatin PF08232.12 ORF107639 - 0.014 16.0 1.6 0.019 15.6 1.6 1.3 1 0 0 1 1 1 0 Striatin family Spore_III_AF PF09581.10 ORF107639 - 0.022 14.8 0.1 0.026 14.6 0.1 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Jnk-SapK_ap_N PF09744.9 ORF107639 - 0.024 14.9 1.7 0.024 14.9 1.7 1.5 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 PspA_IM30 PF04012.12 ORF107639 - 0.025 14.2 1.8 0.04 13.5 1.7 1.4 1 1 0 1 1 1 0 PspA/IM30 family DivIC PF04977.15 ORF107639 - 0.027 14.2 3.2 0.24 11.2 0.8 2.4 1 1 1 2 2 2 0 Septum formation initiator Prefoldin_2 PF01920.20 ORF107639 - 0.032 14.2 1.9 0.42 10.6 0.3 2.4 1 1 1 2 2 2 0 Prefoldin subunit Paramyxo_P PF01806.17 ORF107639 - 0.035 13.5 0.1 0.045 13.2 0.1 1.2 1 0 0 1 1 1 0 Paramyxovirinae P phosphoprotein C-terminal region DUF4298 PF14131.6 ORF107639 - 0.038 14.0 1.6 0.31 11.0 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) LOH1CR12 PF10158.9 ORF107639 - 0.038 14.0 0.4 0.055 13.5 0.4 1.3 1 0 0 1 1 1 0 Tumour suppressor protein DUF2408 PF10303.9 ORF107639 - 0.039 14.5 0.4 0.043 14.4 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Syntaxin-6_N PF09177.11 ORF107639 - 0.041 14.4 2.3 0.65 10.6 0.9 2.1 1 1 1 2 2 2 0 Syntaxin 6, N-terminal RasGAP_C PF03836.15 ORF107639 - 0.043 14.0 3.5 0.054 13.6 3.5 1.2 1 0 0 1 1 1 0 RasGAP C-terminus Syntaxin_2 PF14523.6 ORF107639 - 0.045 14.1 1.3 0.075 13.4 1.3 1.4 1 1 0 1 1 1 0 Syntaxin-like protein DUF745 PF05335.13 ORF107639 - 0.059 13.1 0.4 0.081 12.6 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) Uso1_p115_C PF04871.13 ORF107639 - 0.098 13.0 1.8 0.13 12.7 1.8 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region MscS_porin PF12795.7 ORF107639 - 0.11 12.0 0.7 0.84 9.1 0.1 2.0 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain DUF4337 PF14235.6 ORF107639 - 0.18 11.9 1.9 0.4 10.8 1.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) DUF5082 PF16888.5 ORF107639 - 0.18 12.1 4.4 3.6 7.9 4.4 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Myb_DNA-bind_4 PF13837.6 ORF107639 - 0.26 11.7 3.8 0.48 10.8 3.6 1.6 1 1 0 1 1 1 0 Myb/SANT-like DNA-binding domain Fez1 PF06818.15 ORF107487 - 0.0028 18.1 1.4 0.0032 17.9 1.4 1.1 1 0 0 1 1 1 1 Fez1 ELMO_CED12 PF04727.13 ORF107487 - 0.041 14.0 1.9 0.076 13.1 1.9 1.4 1 1 0 1 1 1 0 ELMO/CED-12 family Syntaxin-5_N PF11416.8 ORF107487 - 0.091 12.0 0.9 0.15 11.3 0.9 1.4 1 0 0 1 1 1 0 Syntaxin-5 N-terminal, Sly1p-binding domain MerR_1 PF13411.6 ORF106820 - 2.7e-18 65.8 0.5 5.7e-18 64.8 0.0 1.7 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 ORF106820 - 3.7e-16 58.6 0.1 7.1e-16 57.7 0.1 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR-DNA-bind PF09278.11 ORF106820 - 1.1e-15 57.9 2.5 1.9e-15 57.1 2.5 1.4 1 0 0 1 1 1 1 MerR, DNA binding Phytochelatin PF05023.14 ORF106820 - 0.013 14.8 0.0 0.015 14.5 0.0 1.1 1 0 0 1 1 1 0 Phytochelatin synthase Tup_N PF08581.10 ORF106820 - 0.016 15.5 0.6 1.2 9.5 0.1 2.2 2 0 0 2 2 2 0 Tup N-terminal DUF1836 PF08876.11 ORF106820 - 0.032 14.3 0.0 0.055 13.5 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1836) DUF2205 PF10224.9 ORF106820 - 0.11 12.5 0.5 0.19 11.8 0.5 1.4 1 0 0 1 1 1 0 Short coiled-coil protein IclR PF01614.18 ORF106644 - 0.014 15.2 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial transcriptional regulator SLBP_RNA_bind PF15247.6 ORF106644 - 0.16 12.1 0.2 0.16 12.1 0.2 1.6 2 0 0 2 2 2 0 Histone RNA hairpin-binding protein RNA-binding domain GYF_2 PF14237.6 ORF106644 - 0.27 11.1 1.4 5.7 6.8 0.2 2.5 2 1 0 2 2 2 0 GYF domain 2 Sel1 PF08238.12 ORF106381 - 2.7e-06 27.9 0.0 0.075 13.7 0.0 3.0 3 0 0 3 3 3 2 Sel1 repeat Abhydrolase_1 PF00561.20 ORF106263 - 0.007 16.0 0.0 0.0071 16.0 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold SPX PF03105.19 ORF106035 - 0.034 14.1 8.4 0.037 13.9 8.4 1.0 1 0 0 1 1 1 0 SPX domain DUF5521 PF17659.1 ORF106035 - 0.65 7.8 3.1 0.78 7.5 3.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5521) Apt1 PF10351.9 ORF106035 - 4 6.2 10.6 4.5 6.0 10.6 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DAGK_prokar PF01219.19 ORF10556 - 0.11 12.3 0.2 0.41 10.5 0.0 1.9 2 0 0 2 2 2 0 Prokaryotic diacylglycerol kinase Herpes_LMP2 PF07415.11 ORF105228 - 3.1 6.5 5.5 3.7 6.2 5.5 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein Pox_D3 PF04580.13 ORF103881 - 0.0055 16.4 0.9 0.0065 16.1 0.9 1.2 1 0 0 1 1 1 1 Chordopoxvirinae D3 protein Ilm1 PF10311.9 ORF102814 - 0.00034 20.3 2.3 0.00034 20.3 2.3 1.4 1 1 1 2 2 2 1 Increased loss of mitochondrial DNA protein 1 Ninjurin PF04923.12 ORF102814 - 0.067 13.1 1.7 0.4 10.6 0.6 2.0 2 0 0 2 2 2 0 Ninjurin DUF4191 PF13829.6 ORF102814 - 0.1 12.0 1.7 0.14 11.5 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Xan_ur_permease PF00860.20 ORF101246 - 2.7e-25 88.9 8.8 2.7e-25 88.9 8.8 1.6 2 0 0 2 2 2 1 Permease family NiFe_hyd_3_EhaA PF17367.2 ORF101246 - 0.55 10.4 6.2 0.12 12.5 2.4 1.8 1 1 1 2 2 2 0 NiFe-hydrogenase-type-3 Eha complex subunit A G-gamma PF00631.22 NODE_47769_length_400_cov_1.684932_g39913_i0reverse_frame_1 - 0.14 12.2 0.1 0.21 11.6 0.1 1.2 1 0 0 1 1 1 0 GGL domain DUF3440 PF11922.8 NODE_47768_length_400_cov_1.810959_g39912_i0reverse_frame_1 - 1.3e-08 34.8 0.0 2.2e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3440) TryThrA_C PF12319.8 NODE_47768_length_400_cov_1.810959_g39912_i0reverse_frame_1 - 0.072 12.6 0.5 0.094 12.2 0.5 1.1 1 0 0 1 1 1 0 Tryptophan-Threonine-rich plasmodium antigen C terminal DUF3440 PF11922.8 NODE_47766_length_400_cov_2.043836_g39910_i0forward_frame_1 - 0.72 9.5 3.6 1.3 8.7 3.6 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3440) zinc_ribbon_13 PF09855.9 NODE_47766_length_400_cov_2.043836_g39910_i0forward_frame_1 - 2.8 8.2 9.4 2.7 8.2 6.7 2.1 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TonB_N PF16031.5 NODE_47765_length_400_cov_2.043836_g39909_i0forward_frame_1 - 2.8 8.5 9.8 0.38 11.3 4.9 1.9 1 1 1 2 2 2 0 TonB polyproline region G6PD_N PF00479.22 NODE_47759_length_400_cov_2.323288_g39903_i0forward_frame_1 - 0.024 15.3 0.1 0.036 14.7 0.1 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, NAD binding domain Yae1_N PF09811.9 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_1 - 0.068 12.9 3.5 0.068 12.9 3.5 3.5 3 0 0 3 3 3 0 Essential protein Yae1, N terminal Zip PF02535.22 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_1 - 0.82 8.8 2.8 0.9 8.7 2.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter IBP39 PF11422.8 NODE_47743_length_400_cov_64.569863_g39887_i0forward_frame_1 - 0.04 13.7 1.3 0.095 12.5 1.3 1.7 1 1 0 1 1 1 0 Initiator binding protein 39 kDa Aldedh PF00171.22 NODE_47739_length_400_cov_73.523288_g39883_i0forward_frame_1 - 0.18 10.3 3.3 0.21 10.0 3.3 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family DUF3053 PF11254.8 NODE_47726_length_400_cov_207.290411_g39871_i0reverse_frame_1 - 0.014 15.0 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3053) Vta1_C PF18097.1 NODE_47726_length_400_cov_207.290411_g39871_i0reverse_frame_1 - 0.027 14.1 2.3 0.28 10.9 0.2 2.2 2 0 0 2 2 2 0 Vta1 C-terminal domain SVWC PF15430.6 NODE_47701_length_401_cov_2.456284_g39847_i0forward_frame_1 - 0.31 11.3 4.5 2.8 8.3 0.4 2.2 1 1 1 2 2 2 0 Single domain von Willebrand factor type C JTB PF05439.12 NODE_47699_length_401_cov_2.715847_g39845_i0forward_frame_1 - 0.097 12.7 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) Pox_LP_H2 PF03356.15 NODE_47698_length_401_cov_2.931694_g39844_i0reverse_frame_1 - 0.086 12.7 2.6 0.12 12.2 2.6 1.2 1 0 0 1 1 1 0 Viral late protein H2 MFS_1 PF07690.16 NODE_47697_length_401_cov_3.008197_g39843_i0reverse_frame_1 - 0.0011 18.0 20.0 0.0037 16.2 20.0 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily RCC1_2 PF13540.6 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_1 - 0.0029 17.4 3.0 1.1 9.1 0.2 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_1 - 1 9.4 7.2 17 5.5 0.9 3.2 3 0 0 3 3 3 0 PheRS DNA binding domain 2 DUF2358 PF10184.9 NODE_47681_length_401_cov_74.008197_g39827_i0reverse_frame_1 - 0.012 15.8 0.9 0.039 14.2 0.1 1.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2358) LepB_GAP_N PF18172.1 NODE_47681_length_401_cov_74.008197_g39827_i0reverse_frame_1 - 0.023 14.6 0.6 0.031 14.2 0.6 1.2 1 0 0 1 1 1 0 LepB GAP domain N-terminal subdomain RELT PF12606.8 NODE_47681_length_401_cov_74.008197_g39827_i0forward_frame_1 - 2.3 7.3 8.6 5.1 6.2 8.6 1.6 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 FCP1_C PF09309.10 NODE_47679_length_401_cov_75.961749_g39825_i0forward_frame_1 - 0.044 13.6 4.6 0.056 13.3 4.6 1.2 1 0 0 1 1 1 0 FCP1, C-terminal CPP1-like PF11833.8 NODE_47679_length_401_cov_75.961749_g39825_i0forward_frame_1 - 0.17 11.5 3.8 0.25 11.0 3.8 1.2 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like NRBF2_MIT PF17169.4 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_1 - 0.18 12.0 1.9 30 4.9 0.1 3.0 2 1 1 3 3 3 0 MIT domain of nuclear receptor-binding factor 2 Med19 PF10278.9 NODE_47655_length_401_cov_168.773224_g39801_i0reverse_frame_1 - 0.65 9.9 0.1 0.65 9.9 0.1 2.1 2 0 0 2 2 2 0 Mediator of RNA pol II transcription subunit 19 DUF1418 PF07214.12 NODE_47650_length_401_cov_826.469945_g39796_i0forward_frame_1 - 0.18 11.6 5.5 0.064 13.1 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1418) DUF5542 PF17696.1 NODE_47646_length_402_cov_1.354223_g39792_i0reverse_frame_1 - 2.6 8.2 4.6 4.9 7.3 4.6 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5542) Ion_trans PF00520.31 NODE_47639_length_402_cov_1.809264_g39785_i0forward_frame_1 - 6.2e-17 61.6 2.5 9.9e-17 61.0 2.5 1.2 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 NODE_47639_length_402_cov_1.809264_g39785_i0forward_frame_1 - 5.8e-05 21.9 4.2 8.8e-05 21.4 4.2 1.1 1 0 0 1 1 1 1 Polycystin cation channel DUF3671 PF12420.8 NODE_47639_length_402_cov_1.809264_g39785_i0forward_frame_1 - 0.005 16.9 3.1 0.0077 16.3 3.1 1.4 1 1 0 1 1 1 1 Protein of unknown function Biotin_lipoyl PF00364.22 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 1.1e-19 70.1 6.3 1.5e-19 69.6 6.3 1.2 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 3.6e-06 26.7 7.3 3.4e-05 23.6 1.7 2.8 2 1 1 3 3 3 2 Biotin-lipoyl like GCV_H PF01597.19 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 2.5e-05 24.2 0.3 4.4e-05 23.4 0.3 1.4 1 0 0 1 1 1 1 Glycine cleavage H-protein PTS_EIIA_1 PF00358.20 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.0022 17.8 1.0 0.19 11.5 0.1 2.3 1 1 1 2 2 2 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RnfC_N PF13375.6 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.0096 15.9 3.4 0.68 9.9 0.1 2.5 2 1 1 3 3 3 2 RnfC Barrel sandwich hybrid domain HlyD_D23 PF16576.5 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.013 14.7 0.8 0.094 11.9 0.1 2.3 2 1 1 3 3 3 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion PYNP_C PF07831.13 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.049 13.3 2.7 0.49 10.1 0.2 2.5 2 1 1 3 3 3 0 Pyrimidine nucleoside phosphorylase C-terminal domain NQRA PF05896.11 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.052 13.0 1.1 0.13 11.7 1.1 1.6 1 1 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PASTA PF03793.19 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.12 12.2 5.7 2.4 8.1 0.3 2.8 1 1 1 2 2 2 0 PASTA domain TFIID-31kDa PF02291.15 NODE_47630_length_402_cov_2.637602_g39776_i0forward_frame_1 - 0.2 11.7 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit RabGAP-TBC PF00566.18 NODE_47624_length_402_cov_3.049046_g39770_i0reverse_frame_1 - 0.039 13.6 1.6 0.053 13.2 1.6 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain DUF261 PF03196.13 NODE_47613_length_402_cov_9.465940_g39759_i0reverse_frame_1 - 0.005 16.9 2.0 0.015 15.4 0.3 2.0 1 1 1 2 2 2 1 Protein of unknown function, DUF261 DUF4014 PF13198.6 NODE_47612_length_402_cov_16.722071_g39758_i0reverse_frame_1 - 0.04 14.3 0.7 0.056 13.8 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4014) DUF5359 PF17313.2 NODE_47612_length_402_cov_16.722071_g39758_i0reverse_frame_1 - 0.059 13.4 3.5 0.1 12.6 3.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5359) GCV_T_C PF08669.11 NODE_47594_length_402_cov_79.539510_g39740_i0reverse_frame_1 - 0.019 14.9 0.5 0.029 14.3 0.5 1.3 1 0 0 1 1 1 0 Glycine cleavage T-protein C-terminal barrel domain Pkinase PF00069.25 NODE_47578_length_402_cov_245.561308_g39724_i0reverse_frame_1 - 0.00035 20.0 0.1 0.00035 20.0 0.1 1.7 2 1 0 2 2 2 1 Protein kinase domain DUF4153 PF13687.6 NODE_47576_length_402_cov_322.288828_g39722_i0reverse_frame_1 - 0.084 12.5 0.1 0.17 11.5 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4153) RPT PF13446.6 NODE_47576_length_402_cov_322.288828_g39722_i0reverse_frame_1 - 0.13 12.2 0.1 0.25 11.3 0.1 1.5 1 0 0 1 1 1 0 A repeated domain in UCH-protein Histone_H2A_C PF16211.5 NODE_47576_length_402_cov_322.288828_g39722_i0reverse_frame_1 - 2.1 8.2 5.0 30 4.5 0.0 2.6 2 0 0 2 2 2 0 C-terminus of histone H2A AAA_assoc_C PF09821.9 NODE_47564_length_403_cov_1.600543_g39713_i0reverse_frame_3 - 0.03 14.9 0.0 0.05 14.1 0.0 1.3 1 0 0 1 1 1 0 C-terminal AAA-associated domain Clathrin_propel PF01394.20 NODE_47561_length_403_cov_1.875000_g39710_i0reverse_frame_3 - 0.075 13.4 0.5 0.21 12.0 0.4 1.9 2 0 0 2 2 2 0 Clathrin propeller repeat AI-2E_transport PF01594.16 NODE_47554_length_403_cov_2.258152_g39703_i0reverse_frame_2 - 2.4e-18 66.4 1.3 2.6e-18 66.3 1.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter ODV-E18 PF10717.9 NODE_47554_length_403_cov_2.258152_g39703_i0reverse_frame_2 - 0.058 13.3 0.9 0.11 12.4 0.9 1.5 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Peptidase_M1 PF01433.20 NODE_47549_length_403_cov_2.660326_g39698_i0reverse_frame_3 - 3.2e-11 43.2 0.0 3.8e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1 PF01433.20 NODE_47549_length_403_cov_2.660326_g39698_i0reverse_frame_2 - 3.8e-20 72.4 2.2 4.5e-20 72.2 2.2 1.2 1 0 0 1 1 1 1 Peptidase family M1 domain WLM PF08325.10 NODE_47549_length_403_cov_2.660326_g39698_i0reverse_frame_2 - 0.071 13.2 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 WLM domain TMEM210 PF15195.6 NODE_47544_length_403_cov_2.798913_g39693_i0reverse_frame_3 - 0.17 12.3 0.0 0.23 11.9 0.0 1.2 1 0 0 1 1 1 0 TMEM210 family Complex1_49kDa PF00346.19 NODE_47544_length_403_cov_2.798913_g39693_i0forward_frame_3 - 1.6e-14 53.7 0.0 2.1e-10 40.2 0.0 2.3 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PspB PF06667.12 NODE_47542_length_403_cov_2.904891_g39691_i0reverse_frame_3 - 0.024 14.7 0.1 0.053 13.6 0.1 1.5 1 0 0 1 1 1 0 Phage shock protein B RPGR1_C PF18111.1 NODE_47542_length_403_cov_2.904891_g39691_i0reverse_frame_3 - 0.23 11.3 2.7 0.65 9.9 0.3 2.0 1 1 1 2 2 2 0 Retinitis pigmentosa G-protein regulator interacting C-terminal DP PF08781.10 NODE_47541_length_403_cov_2.961957_g39690_i0reverse_frame_2 - 0.13 12.1 6.2 0.14 12.0 5.8 1.3 1 1 0 1 1 1 0 Transcription factor DP Ribosomal_L14 PF00238.19 NODE_47536_length_403_cov_3.760870_g39685_i0reverse_frame_2 - 5.4e-45 152.4 1.6 6.1e-45 152.2 1.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Gp58 PF07902.11 NODE_47536_length_403_cov_3.760870_g39685_i0reverse_frame_2 - 0.074 11.3 0.1 0.07 11.4 0.1 1.1 1 0 0 1 1 1 0 gp58-like protein CENP-F_C_Rb_bdg PF10490.9 NODE_47536_length_403_cov_3.760870_g39685_i0forward_frame_2 - 0.14 11.6 0.5 0.34 10.4 0.5 1.6 1 0 0 1 1 1 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 Aminotran_5 PF00266.19 NODE_47535_length_403_cov_4.222826_g39684_i0forward_frame_2 - 2.2e-11 43.3 0.0 2.4e-11 43.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V PhoU_div PF01865.16 NODE_47530_length_403_cov_44.048913_g39679_i0reverse_frame_2 - 0.011 15.0 4.1 0.58 9.5 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function DUF47 Syntaxin-6_N PF09177.11 NODE_47530_length_403_cov_44.048913_g39679_i0reverse_frame_2 - 0.023 15.3 6.0 0.073 13.6 6.0 1.8 1 1 0 1 1 1 0 Syntaxin 6, N-terminal BRE1 PF08647.11 NODE_47530_length_403_cov_44.048913_g39679_i0reverse_frame_2 - 0.88 9.7 13.6 0.26 11.4 6.5 2.3 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase cNMP_binding PF00027.29 NODE_47522_length_403_cov_62.562500_g39671_i0reverse_frame_2 - 9.7e-08 32.0 0.0 1.4e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Rox3 PF08633.10 NODE_47520_length_403_cov_65.236413_g39669_i0reverse_frame_3 - 0.039 14.2 2.4 0.047 14.0 2.4 1.1 1 0 0 1 1 1 0 Rox3 mediator complex subunit DUF613 PF04764.12 NODE_47517_length_403_cov_73.293478_g39666_i0reverse_frame_2 - 0.012 15.7 4.7 0.02 15.0 4.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF613) Polysacc_synt_3 PF13440.6 NODE_47515_length_403_cov_76.092391_g39664_i0reverse_frame_3 - 0.18 11.0 0.0 0.22 10.7 0.0 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein TT_ORF1 PF02956.14 NODE_47509_length_403_cov_83.869565_g39658_i0reverse_frame_3 - 5 5.7 8.2 12 4.5 8.2 1.5 1 1 1 2 2 2 0 TT viral orf 1 CD34_antigen PF06365.12 NODE_47504_length_403_cov_96.241848_g39653_i0forward_frame_3 - 0.025 14.2 0.0 0.036 13.7 0.0 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family IMPa_helical PF18642.1 NODE_47501_length_403_cov_100.154891_g39650_i0reverse_frame_2 - 0.014 15.8 0.0 0.027 14.9 0.0 1.5 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain FERM_F1 PF18379.1 NODE_47501_length_403_cov_100.154891_g39650_i0reverse_frame_2 - 0.12 12.4 1.0 0.19 11.7 1.0 1.3 1 0 0 1 1 1 0 FERM F1 ubiquitin-like domain AA_permease PF00324.21 NODE_47501_length_403_cov_100.154891_g39650_i0forward_frame_3 - 0.077 11.6 0.1 0.096 11.2 0.1 1.1 1 0 0 1 1 1 0 Amino acid permease DUF1442 PF07279.11 NODE_47493_length_403_cov_143.975543_g39642_i0reverse_frame_3 - 0.012 14.9 0.1 0.016 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1442) Defensin_RK-1 PF17860.1 NODE_47493_length_403_cov_143.975543_g39642_i0forward_frame_3 - 0.12 12.9 0.1 0.91 10.0 0.0 2.1 2 0 0 2 2 2 0 RK-1-like defensin NAP PF00956.18 NODE_47491_length_403_cov_151.972826_g39640_i0reverse_frame_2 - 9.5 5.3 7.4 12 5.0 7.4 1.1 1 0 0 1 1 1 0 Nucleosome assembly protein (NAP) WD40_3 PF15911.5 NODE_47487_length_403_cov_163.836957_g39636_i0forward_frame_2 - 4e-21 74.8 0.2 7.1e-21 74.0 0.2 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat Serinc PF03348.15 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.0063 15.5 0.9 0.0072 15.3 0.9 1.1 1 0 0 1 1 1 1 Serine incorporator (Serinc) SID-1_RNA_chan PF13965.6 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.085 11.3 3.5 0.091 11.2 3.5 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 ArfGap PF01412.18 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.12 12.4 7.0 0.19 11.8 6.9 1.5 1 1 0 1 1 1 0 Putative GTPase activating protein for Arf CLN3 PF02487.17 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.33 10.0 1.4 0.39 9.7 1.4 1.1 1 0 0 1 1 1 0 CLN3 protein Presenilin PF01080.17 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.89 8.3 3.6 0.92 8.2 3.6 1.1 1 0 0 1 1 1 0 Presenilin BLOC1_2 PF10046.9 NODE_47475_length_403_cov_378.687500_g39624_i0reverse_frame_3 - 0.015 15.6 7.1 0.02 15.2 6.4 1.6 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 LPP PF04728.13 NODE_47475_length_403_cov_378.687500_g39624_i0reverse_frame_3 - 0.14 12.5 0.2 0.14 12.5 0.2 3.2 3 1 0 3 3 3 0 Lipoprotein leucine-zipper FlaC_arch PF05377.11 NODE_47475_length_403_cov_378.687500_g39624_i0reverse_frame_3 - 0.36 11.3 2.4 1.9 9.0 0.0 2.8 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Nup88 PF10168.9 NODE_47475_length_403_cov_378.687500_g39624_i0reverse_frame_3 - 0.46 8.2 7.5 0.55 8.0 7.5 1.0 1 0 0 1 1 1 0 Nuclear pore component DUF3584 PF12128.8 NODE_47475_length_403_cov_378.687500_g39624_i0reverse_frame_3 - 1.5 6.3 15.6 1.7 6.1 15.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) CFC PF09443.10 NODE_47473_length_403_cov_591.005435_g39622_i0forward_frame_2 - 0.079 12.8 0.1 0.079 12.8 0.1 1.8 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) S_2TMBeta PF18153.1 NODE_47469_length_403_cov_5153.048913_g39620_i0reverse_frame_3 - 0.14 12.0 0.3 0.17 11.6 0.3 1.1 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain Filo_VP24 PF06389.11 NODE_47464_length_404_cov_1.574526_g39615_i0reverse_frame_2 - 0.19 11.2 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 Filovirus membrane-associated protein VP24 SPRY PF00622.28 NODE_47464_length_404_cov_1.574526_g39615_i0forward_frame_3 - 1.1 9.4 3.1 4.6 7.4 1.1 2.2 1 1 1 2 2 2 0 SPRY domain HAND PF09110.11 NODE_47464_length_404_cov_1.574526_g39615_i0forward_frame_2 - 0.054 14.2 0.0 0.065 14.0 0.0 1.2 1 0 0 1 1 1 0 HAND SPO11_like PF03533.14 NODE_47464_length_404_cov_1.574526_g39615_i0forward_frame_2 - 0.12 12.4 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 SPO11 homologue MIP PF00230.20 NODE_47462_length_404_cov_1.772358_g39613_i0reverse_frame_2 - 0.035 13.8 0.2 0.04 13.6 0.2 1.1 1 0 0 1 1 1 0 Major intrinsic protein DUF3794 PF12673.7 NODE_47458_length_404_cov_2.059621_g39609_i0forward_frame_2 - 0.034 14.4 0.1 0.05 13.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3794) REGB_T4 PF10715.9 NODE_47456_length_404_cov_2.140921_g39607_i0reverse_frame_3 - 0.13 12.4 0.0 0.23 11.6 0.0 1.4 1 1 0 1 1 1 0 T4-page Endoribonuclease RegB DAO PF01266.24 NODE_47455_length_404_cov_2.203252_g39606_i0forward_frame_3 - 7.8e-08 32.3 0.0 8.9e-08 32.1 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase DUF2770 PF10968.8 NODE_47455_length_404_cov_2.203252_g39606_i0forward_frame_2 - 1.1e-15 57.3 11.1 1.9e-15 56.5 11.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2770) DUF3626 PF12294.8 NODE_47451_length_404_cov_2.780488_g39602_i0reverse_frame_3 - 0.11 11.5 0.0 0.14 11.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3626) DNA_Packaging_2 PF11123.8 NODE_47451_length_404_cov_2.780488_g39602_i0reverse_frame_3 - 0.17 12.1 0.0 0.25 11.6 0.0 1.2 1 0 0 1 1 1 0 DNA packaging protein FAD_binding_6 PF00970.24 NODE_47451_length_404_cov_2.780488_g39602_i0reverse_frame_2 - 0.12 12.8 0.2 0.19 12.1 0.2 1.4 1 0 0 1 1 1 0 Oxidoreductase FAD-binding domain UCH PF00443.29 NODE_47449_length_404_cov_3.262873_g39600_i0reverse_frame_3 - 2.1e-06 27.4 0.1 3.4e-06 26.7 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_47449_length_404_cov_3.262873_g39600_i0reverse_frame_3 - 0.0046 16.6 0.1 0.0066 16.1 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PEX11 PF05648.14 NODE_47441_length_404_cov_34.447154_g39593_i0reverse_frame_3 - 2.8 7.4 11.2 0.26 10.7 6.0 1.7 1 1 1 2 2 2 0 Peroxisomal biogenesis factor 11 (PEX11) Phage_head_chap PF11113.8 NODE_47439_length_404_cov_61.360434_g39591_i0reverse_frame_2 - 0.046 13.8 0.1 1.2 9.2 0.0 2.3 2 0 0 2 2 2 0 Head assembly gene product CpeT PF06206.11 NODE_47439_length_404_cov_61.360434_g39591_i0reverse_frame_2 - 0.077 13.0 0.2 0.26 11.2 0.1 1.7 2 0 0 2 2 2 0 CpeT/CpcT family (DUF1001) SeqA_N PF17206.3 NODE_47437_length_404_cov_66.867209_g39589_i0reverse_frame_2 - 0.011 15.0 0.0 0.022 14.0 0.0 1.4 1 0 0 1 1 1 0 SeqA protein N-terminal domain Lectin_N PF03954.14 NODE_47437_length_404_cov_66.867209_g39589_i0forward_frame_2 - 0.043 13.6 0.4 0.061 13.1 0.4 1.2 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain TSNAXIP1_N PF15739.5 NODE_47437_length_404_cov_66.867209_g39589_i0forward_frame_2 - 0.055 13.8 7.6 0.076 13.4 7.6 1.4 1 1 0 1 1 1 0 Translin-associated factor X-interacting N-terminus HEPN_AbiA_CTD PF18732.1 NODE_47433_length_404_cov_77.761518_g39585_i0reverse_frame_2 - 0.011 15.7 0.4 0.014 15.3 0.4 1.2 1 0 0 1 1 1 0 HEPN like, Abia C-terminal domain DUF5556 PF17711.1 NODE_47433_length_404_cov_77.761518_g39585_i0forward_frame_3 - 0.047 13.6 0.2 0.07 13.0 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5556) Nse4_C PF08743.10 NODE_47433_length_404_cov_77.761518_g39585_i0forward_frame_3 - 0.063 13.5 0.2 0.1 12.9 0.2 1.3 1 0 0 1 1 1 0 Nse4 C-terminal OPA3 PF07047.12 NODE_47430_length_404_cov_86.379404_g39582_i0forward_frame_3 - 0.023 14.5 0.0 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 Optic atrophy 3 protein (OPA3) LSM PF01423.22 NODE_47430_length_404_cov_86.379404_g39582_i0forward_frame_2 - 7.5e-16 57.6 0.0 1.1e-15 57.1 0.0 1.2 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 NODE_47430_length_404_cov_86.379404_g39582_i0forward_frame_2 - 3e-05 24.1 0.0 5.2e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Ataxin 2 SM domain Tudor_2 PF18104.1 NODE_47430_length_404_cov_86.379404_g39582_i0forward_frame_2 - 0.048 13.3 0.0 0.099 12.3 0.0 1.6 1 0 0 1 1 1 0 Jumonji domain-containing protein 2A Tudor domain DUF4648 PF15505.6 NODE_47424_length_404_cov_96.666667_g39576_i0reverse_frame_2 - 0.1 13.4 0.1 0.22 12.4 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4648) CCDC14 PF15254.6 NODE_47423_length_404_cov_100.631436_g39575_i0reverse_frame_2 - 1.6 7.3 2.9 1.9 7.1 2.9 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 Methyltrn_RNA_2 PF04013.12 NODE_47423_length_404_cov_100.631436_g39575_i0forward_frame_3 - 9.8e-08 31.9 0.0 1.4e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase Methyltrans_RNA PF04452.14 NODE_47423_length_404_cov_100.631436_g39575_i0forward_frame_3 - 0.049 13.0 0.0 0.061 12.7 0.0 1.1 1 0 0 1 1 1 0 RNA methyltransferase DUF5090 PF17009.5 NODE_47415_length_404_cov_130.574526_g39567_i0reverse_frame_2 - 2.4 8.1 13.5 3.1 7.7 13.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) MgtE PF01769.16 NODE_47415_length_404_cov_130.574526_g39567_i0reverse_frame_2 - 8.5 6.8 13.2 19 5.6 13.2 1.7 1 1 0 1 1 1 0 Divalent cation transporter SlyX PF04102.12 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.01 16.4 9.9 0.14 12.8 5.4 2.6 1 1 1 2 2 2 0 SlyX DUF465 PF04325.13 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.013 15.5 16.6 0.053 13.6 2.9 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF465) ZapB PF06005.12 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.046 14.2 24.6 0.047 14.1 8.5 2.4 2 1 1 3 3 2 0 Cell division protein ZapB FPP PF05911.11 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.07 11.3 18.8 0.083 11.1 18.8 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil CC2-LZ PF16516.5 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.088 13.2 19.6 1.2 9.5 1.5 2.3 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator PKcGMP_CC PF16808.5 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.09 12.6 0.3 0.09 12.6 0.3 4.0 3 1 1 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Med4 PF10018.9 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.093 12.4 13.2 0.15 11.8 12.6 1.7 1 1 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 LPP PF04728.13 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.11 12.9 6.4 19 5.8 6.0 2.6 1 1 0 1 1 1 0 Lipoprotein leucine-zipper Laminin_I PF06008.14 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.15 11.7 19.0 0.2 11.3 10.9 2.0 1 1 1 2 2 2 0 Laminin Domain I DivIC PF04977.15 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.17 11.7 22.2 1.5 8.7 6.2 3.2 1 1 2 3 3 3 0 Septum formation initiator DUF724 PF05266.14 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.23 11.3 17.8 0.33 10.7 17.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) YabA PF06156.13 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.23 12.1 14.3 0.12 13.0 4.5 2.3 1 1 1 2 2 2 0 Initiation control protein YabA Mod_r PF07200.13 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.35 11.0 20.6 0.67 10.1 4.5 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein DUF3450 PF11932.8 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.43 9.8 19.9 0.53 9.5 12.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Spc24 PF08286.11 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.47 10.7 17.6 0.95 9.7 6.7 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF4795 PF16043.5 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.48 10.0 19.1 0.14 11.8 7.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) APG6_N PF17675.1 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.63 10.6 22.5 0.8 10.2 5.1 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region GAPT PF11770.8 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.7 9.7 6.6 0.11 12.3 2.1 1.6 1 1 1 2 2 2 0 GRB2-binding adapter (GAPT) ADIP PF11559.8 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 0.72 9.9 21.8 0.25 11.4 17.1 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding FAM76 PF16046.5 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 1.2 8.4 17.2 1.7 7.9 17.2 1.3 1 0 0 1 1 1 0 FAM76 protein CENP-H PF05837.12 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 1.3 9.5 19.6 0.29 11.5 1.4 2.4 1 1 0 2 2 2 0 Centromere protein H (CENP-H) DUF4407 PF14362.6 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 2 7.7 12.8 3 7.1 12.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Synaptobrevin PF00957.21 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 2.1 8.2 9.1 0.54 10.1 4.9 1.9 2 0 0 2 2 2 0 Synaptobrevin HemX PF04375.14 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 2.3 7.4 17.3 2 7.6 10.9 2.0 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase FlaC_arch PF05377.11 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 2.4 8.6 17.1 7.2 7.1 6.6 2.6 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Fib_alpha PF08702.10 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 2.4 8.3 20.2 1.7 8.9 11.5 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family CEP209_CC5 PF16574.5 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 4 7.6 20.7 0.46 10.7 14.5 2.2 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 Atg14 PF10186.9 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 4.3 6.3 22.5 3.1 6.8 4.5 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2203 PF09969.9 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 5.3 7.8 12.2 6.8 7.4 5.7 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF641 PF04859.12 NODE_47415_length_404_cov_130.574526_g39567_i0forward_frame_3 - 8.8 6.7 16.5 2.9 8.2 9.2 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) PLDc_N PF13396.6 NODE_47405_length_404_cov_245.902439_g39557_i0reverse_frame_3 - 0.21 11.5 0.2 0.21 11.5 0.2 2.4 2 0 0 2 2 2 0 Phospholipase_D-nuclease N-terminal ACAS_N PF16177.5 NODE_47403_length_404_cov_272.924119_g39555_i0reverse_frame_3 - 0.042 13.8 0.1 0.09 12.7 0.1 1.5 1 0 0 1 1 1 0 Acetyl-coenzyme A synthetase N-terminus DUF2312 PF10073.9 NODE_47403_length_404_cov_272.924119_g39555_i0reverse_frame_3 - 0.25 11.0 2.7 1.8 8.3 0.8 2.5 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) FAM163 PF15069.6 NODE_47400_length_404_cov_327.837398_g39552_i0reverse_frame_2 - 0.00048 20.6 0.2 0.00072 20.0 0.2 1.3 1 0 0 1 1 1 1 FAM163 family UPF0239 PF06783.11 NODE_47400_length_404_cov_327.837398_g39552_i0reverse_frame_2 - 0.016 15.4 2.0 0.026 14.7 2.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) ASFV_J13L PF05568.11 NODE_47400_length_404_cov_327.837398_g39552_i0reverse_frame_2 - 0.059 13.1 0.0 0.077 12.7 0.0 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Protocadherin PF08374.11 NODE_47400_length_404_cov_327.837398_g39552_i0reverse_frame_2 - 0.095 12.7 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Protocadherin GRP PF07172.11 NODE_47400_length_404_cov_327.837398_g39552_i0reverse_frame_2 - 0.23 12.2 0.0 0.42 11.3 0.0 1.5 1 0 0 1 1 1 0 Glycine rich protein family Connexin PF00029.19 NODE_47400_length_404_cov_327.837398_g39552_i0reverse_frame_2 - 0.27 11.0 2.0 0.56 9.9 0.2 1.9 2 0 0 2 2 2 0 Connexin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks170.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks170.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks170.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks170.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5375 PF17345.2 NODE_47397_length_404_cov_844.997290_g39549_i0reverse_frame_3 - 0.068 13.0 0.4 0.14 12.1 0.4 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5375) PAC4 PF16093.5 NODE_47391_length_404_cov_2727.116531_g37845_i2reverse_frame_3 - 7.7e-08 32.4 0.0 1e-07 32.0 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 DUF5540 PF17694.1 NODE_47390_length_404_cov_9568.807588_g39545_i0reverse_frame_2 - 0.24 11.9 5.0 5.3 7.6 0.9 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5540) 40S_SA_C PF16122.5 NODE_47384_length_405_cov_2.124324_g39539_i0forward_frame_2 - 0.014 16.7 1.2 0.021 16.1 1.2 1.2 1 0 0 1 1 1 0 40S ribosomal protein SA C-terminus Crisp PF08562.10 NODE_47383_length_405_cov_2.167568_g39538_i0reverse_frame_2 - 0.13 12.9 4.0 0.21 12.2 4.0 1.2 1 0 0 1 1 1 0 Crisp DUF4957 PF16318.5 NODE_47382_length_405_cov_2.194595_g39537_i0forward_frame_3 - 0.032 14.2 1.6 0.045 13.7 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) PRR20 PF15708.5 NODE_47378_length_405_cov_2.340541_g39533_i0forward_frame_3 - 4.8 7.0 6.5 4.9 7.0 5.9 1.4 1 1 0 1 1 1 0 Proline-rich protein family 20 Glyco_hydro_2_N PF02837.18 NODE_47375_length_405_cov_2.729730_g39530_i0forward_frame_2 - 2.6e-16 60.0 0.4 3.6e-16 59.5 0.4 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, sugar binding domain Osteopontin PF00865.18 NODE_47361_length_405_cov_51.986486_g39516_i0forward_frame_2 - 0.015 14.8 15.1 0.018 14.6 15.1 1.0 1 0 0 1 1 1 0 Osteopontin CDC45 PF02724.14 NODE_47361_length_405_cov_51.986486_g39516_i0forward_frame_2 - 6.6 4.9 14.2 7.3 4.7 14.2 1.0 1 0 0 1 1 1 0 CDC45-like protein RRN3 PF05327.11 NODE_47361_length_405_cov_51.986486_g39516_i0forward_frame_2 - 8.4 4.8 10.8 8.4 4.8 10.8 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 DUF5089 PF17002.5 NODE_47360_length_405_cov_55.940541_g39515_i0reverse_frame_3 - 0.046 13.6 6.7 0.061 13.2 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5089) UPF0242 PF06785.11 NODE_47360_length_405_cov_55.940541_g39515_i0reverse_frame_3 - 0.047 13.8 2.7 0.051 13.7 2.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4199 PF13858.6 NODE_47360_length_405_cov_55.940541_g39515_i0reverse_frame_3 - 0.093 13.1 0.4 0.12 12.8 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) zf-PARP PF00645.18 NODE_47359_length_405_cov_58.297297_g39514_i0reverse_frame_2 - 0.076 13.9 0.2 0.12 13.3 0.2 1.3 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region SpoU_methylase PF00588.19 NODE_47359_length_405_cov_58.297297_g39514_i0forward_frame_3 - 2.8e-11 43.7 0.0 3.8e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family Orthopox_F14 PF06076.12 NODE_47353_length_405_cov_70.327027_g39508_i0forward_frame_3 - 0.026 14.8 0.2 0.047 14.0 0.2 1.5 1 0 0 1 1 1 0 Orthopoxvirus F14 protein WW PF00397.26 NODE_47350_length_405_cov_75.424324_g39505_i0reverse_frame_3 - 0.00088 19.3 0.3 0.0014 18.7 0.3 1.3 1 0 0 1 1 1 1 WW domain DUF4729 PF15866.5 NODE_47349_length_405_cov_76.829730_g39504_i0reverse_frame_2 - 0.046 13.0 0.1 0.053 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4729) aGPT-Pplase2 PF18724.1 NODE_47339_length_405_cov_97.456757_g39494_i0forward_frame_2 - 0.085 12.6 1.3 2.3 7.9 0.1 2.0 2 0 0 2 2 2 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 2 DUF3099 PF11298.8 NODE_47331_length_405_cov_129.664865_g39486_i0forward_frame_3 - 5.2 7.3 7.1 16 5.7 1.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3099) Antimicrobial10 PF08105.11 NODE_47327_length_405_cov_164.535135_g39482_i0forward_frame_2 - 0.081 13.0 0.1 0.19 11.8 0.1 1.6 1 0 0 1 1 1 0 Metchnikowin family DUF5332 PF17266.2 NODE_47324_length_405_cov_182.348649_g39479_i0reverse_frame_2 - 0.013 15.2 0.2 0.022 14.5 0.2 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5332) Tmp39 PF10271.9 NODE_47324_length_405_cov_182.348649_g39479_i0forward_frame_3 - 0.056 12.4 0.1 0.063 12.3 0.1 1.1 1 0 0 1 1 1 0 Putative transmembrane protein UBM PF14377.6 NODE_47323_length_405_cov_194.321622_g39478_i0reverse_frame_2 - 0.023 14.1 1.4 0.13 11.7 1.4 2.3 1 1 0 1 1 1 0 Ubiquitin binding region Methyltransf_4 PF02390.17 NODE_47323_length_405_cov_194.321622_g39478_i0forward_frame_3 - 0.059 12.8 0.0 0.078 12.4 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase Gly-zipper_OmpA PF13436.6 NODE_47323_length_405_cov_194.321622_g39478_i0forward_frame_2 - 0.041 13.7 2.5 0.088 12.6 2.5 1.5 1 0 0 1 1 1 0 Glycine-zipper domain YbaB_DNA_bd PF02575.16 NODE_47319_length_405_cov_238.659459_g39474_i0forward_frame_3 - 0.022 15.0 0.1 0.04 14.1 0.1 1.5 1 0 0 1 1 1 0 YbaB/EbfC DNA-binding family Mpv17_PMP22 PF04117.12 NODE_47314_length_405_cov_370.821622_g39469_i0forward_frame_3 - 0.004 17.4 3.4 0.0095 16.2 3.4 1.7 1 0 0 1 1 1 1 Mpv17 / PMP22 family zf-A20 PF01754.16 NODE_47311_length_405_cov_593.829730_g39466_i0forward_frame_3 - 0.18 11.8 1.0 0.18 11.8 1.0 1.8 2 0 0 2 2 2 0 A20-like zinc finger DUF1378 PF07125.11 NODE_47306_length_405_cov_3801.051351_g39462_i0reverse_frame_3 - 0.25 11.5 2.0 0.45 10.7 2.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) Lipid_bd PF12888.7 ORF99137 - 0.011 16.2 0.1 0.018 15.5 0.1 1.3 1 0 0 1 1 1 0 Lipid-binding putative hydrolase S_layer_N PF05123.12 ORF98802 - 0.0019 18.1 0.5 0.0021 18.0 0.5 1.0 1 0 0 1 1 1 1 S-layer like family, N-terminal region Ytp1 PF10355.9 ORF98588 - 0.17 11.1 0.1 1.1 8.4 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (Ytp1) DnaA_N PF11638.8 ORF97920 - 0.0063 16.2 0.1 0.018 14.7 0.1 1.8 1 0 0 1 1 1 1 DnaA N-terminal domain Glycoamylase PF10091.9 ORF97920 - 0.098 12.2 1.2 0.13 11.8 1.2 1.1 1 0 0 1 1 1 0 Putative glucoamylase RcsF PF16358.5 ORF97346 - 4e-50 168.5 0.2 5.1e-50 168.1 0.2 1.1 1 0 0 1 1 1 1 RcsF lipoprotein DUF4156 PF13698.6 ORF97346 - 0.051 13.9 0.0 0.073 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) DUF4692 PF15763.5 ORF97346 - 0.064 13.7 0.0 0.08 13.4 0.0 1.2 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) DUF5006 PF16397.5 ORF97346 - 0.24 10.5 0.1 0.36 10.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5006) YEATS PF03366.16 ORF96196 - 3.4e-21 75.0 0.1 6.2e-21 74.2 0.1 1.3 1 0 0 1 1 1 1 YEATS family LRR_6 PF13516.6 ORF95958 - 4.3e-06 26.4 0.1 1.8 8.8 0.1 3.4 3 0 0 3 3 3 3 Leucine Rich repeat Prominin PF05478.11 ORF95958 - 0.0014 16.7 1.6 0.0017 16.4 1.6 1.0 1 0 0 1 1 1 1 Prominin MFS_1 PF07690.16 ORF95625 - 6.6e-07 28.6 11.1 7.9e-07 28.3 11.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1831 PF08866.10 ORF93980 - 0.00021 21.7 0.0 0.00054 20.4 0.0 1.7 1 1 1 2 2 2 1 Putative amino acid metabolism TPR_8 PF13181.6 ORF93426 - 0.027 14.7 2.6 0.86 10.0 0.1 3.0 4 0 0 4 4 4 0 Tetratricopeptide repeat Adeno_E1B_19K PF01691.16 ORF93426 - 0.029 13.9 0.6 0.048 13.2 0.5 1.5 1 1 0 1 1 1 0 Adenovirus E1B 19K protein / small t-antigen SMBP PF16785.5 ORF93426 - 0.037 14.2 3.1 0.29 11.4 0.6 2.3 1 1 1 2 2 2 0 Small metal-binding protein TPR_6 PF13174.6 ORF93426 - 0.06 14.0 0.9 2.3 9.0 0.1 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF93426 - 0.11 12.6 1.4 13 6.2 0.0 2.8 3 1 0 3 3 3 0 Tetratricopeptide repeat kleA_kleC PF17383.2 ORF93426 - 0.25 11.7 8.5 1.5 9.2 1.3 2.9 1 1 1 3 3 3 0 Uncharacterized KorC regulated protein A Gluconate_2-dh3 PF13618.6 ORF93426 - 0.74 10.0 5.2 0.6 10.3 3.7 1.7 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 DUF1471 PF07338.13 ORF93179 - 1.1e-17 63.7 0.1 2.3e-17 62.7 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) PTPA PF03095.15 ORF92833 - 6.8e-53 180.1 0.0 7.5e-53 179.9 0.0 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein RBR PF17208.3 ORF92686 - 0.028 15.1 9.9 0.028 15.1 9.9 2.1 1 1 1 2 2 2 0 RNA binding Region UMP1 PF05348.11 ORF91967 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF91967 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein DHHC PF01529.20 ORF9195 - 6.8e-06 26.2 2.8 8.4e-06 25.9 2.8 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase DUF5090 PF17009.5 ORF9195 - 1.1 9.2 6.0 1.3 8.9 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) TetR_C_2 PF08361.11 ORF91608 - 0.079 13.1 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 MAATS-type transcriptional repressor, C-terminal region Ubiquitin_4 PF18036.1 ORF9106 - 0.048 13.7 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-like domain RRM_1 PF00076.22 ORF88498 - 2.1e-20 72.3 0.7 3.8e-20 71.5 0.7 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF88498 - 0.019 15.1 0.1 0.035 14.2 0.1 1.6 1 1 0 1 1 1 0 RNA recognition motif Nup35_RRM PF05172.13 ORF88498 - 0.022 14.7 0.8 0.047 13.6 0.8 1.7 1 1 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Nup35_RRM_2 PF14605.6 ORF88498 - 0.047 13.7 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Peptidase_S9 PF00326.21 ORF87957 - 7.1e-07 28.9 0.0 7.1e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 ORF87957 - 0.00044 20.1 0.0 0.00055 19.8 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 ORF87957 - 0.0031 16.8 0.1 0.0076 15.5 0.0 1.6 1 1 1 2 2 2 1 Serine aminopeptidase, S33 BAAT_C PF08840.11 ORF87957 - 0.0055 16.7 0.0 0.054 13.4 0.0 2.0 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.18 ORF87957 - 0.19 11.2 0.0 0.43 10.1 0.0 1.7 1 1 0 1 1 1 0 Dienelactone hydrolase family HTH_28 PF13518.6 ORF87737 - 0.11 12.7 0.1 0.34 11.1 0.0 1.9 1 1 1 2 2 2 0 Helix-turn-helix domain SF3a60_bindingd PF12108.8 ORF87464 - 0.11 12.4 0.7 0.11 12.4 0.7 2.5 3 0 0 3 3 3 0 Splicing factor SF3a60 binding domain Bestrophin PF01062.21 ORF87214 - 0.039 13.3 1.7 0.061 12.7 1.7 1.3 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel DUF2484 PF10658.9 ORF87214 - 1.9 8.8 11.0 0.71 10.2 6.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2484) Nuc_sug_transp PF04142.15 ORF85704 - 1.4e-12 47.4 0.6 1.7e-12 47.1 0.6 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF85704 - 1.1e-05 25.6 16.5 0.0096 16.1 2.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family SLC35F PF06027.12 ORF85704 - 0.0022 17.6 4.6 0.0025 17.4 4.6 1.0 1 0 0 1 1 1 1 Solute carrier family 35 UAA PF08449.11 ORF85704 - 0.0036 16.6 3.6 0.0061 15.8 3.6 1.4 1 1 0 1 1 1 1 UAA transporter family CRT-like PF08627.10 ORF85704 - 0.06 12.3 9.9 0.064 12.2 9.9 1.0 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like CPP1-like PF11833.8 ORF85704 - 0.38 10.4 1.7 0.52 9.9 1.7 1.3 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF4231 PF14015.6 ORF85704 - 0.52 10.8 2.9 0.86 10.1 0.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) DUF1129 PF06570.11 ORF85704 - 3 7.3 7.3 0.35 10.3 1.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) DUF3425 PF11905.8 ORF84635 - 0.13 12.3 0.1 0.22 11.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) 14-3-3 PF00244.20 ORF84148 - 3.2e-55 187.0 1.2 3.5e-55 186.9 1.2 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF84148 - 0.072 13.1 0.4 0.19 11.7 0.2 1.7 2 0 0 2 2 2 0 Flagellar protein FlaF Pentapeptide_4 PF13599.6 ORF83721 - 0.06 13.5 3.7 0.2 11.9 3.0 2.1 1 1 1 2 2 2 0 Pentapeptide repeats (9 copies) PTPA PF03095.15 ORF83424 - 6.8e-53 180.1 0.0 7.5e-53 179.9 0.0 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein AAA_8 PF12780.7 ORF82477 - 0.00052 19.4 0.9 0.00064 19.1 0.9 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 Frataxin_Cyay PF01491.16 ORF80346 - 0.083 13.0 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Frataxin-like domain Hira PF07569.11 ORF78497 - 0.00035 20.4 0.1 0.00043 20.1 0.1 1.1 1 0 0 1 1 1 1 TUP1-like enhancer of split 4HB_MCP_1 PF12729.7 ORF78497 - 0.0097 15.5 0.6 0.013 15.0 0.6 1.1 1 0 0 1 1 1 1 Four helix bundle sensory module for signal transduction DUF2660 PF10859.8 ORF78497 - 0.042 14.3 0.8 0.11 13.0 0.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2660) DUF3323 PF11796.8 ORF78185 - 0.36 10.7 2.8 0.53 10.1 2.8 1.3 1 0 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) Allexi_40kDa PF05549.11 ORF78185 - 0.38 10.2 8.8 0.47 9.9 8.8 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein KIP1 PF07765.12 ORF78185 - 0.72 10.0 17.3 0.052 13.7 9.0 2.6 1 1 1 2 2 2 0 KIP1-like protein Casc1 PF12366.8 ORF78185 - 3.9 6.9 17.3 0.61 9.6 12.9 1.7 1 1 1 2 2 2 0 Cancer susceptibility candidate 1 RmlD_sub_bind PF04321.17 ORF77720 - 2e-37 128.9 0.0 2.2e-37 128.7 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Wound_ind PF08186.11 ORF76800 - 0.11 13.0 1.1 0.19 12.2 1.1 1.4 1 0 0 1 1 1 0 Wound-inducible basic protein family Penicil_amidase PF01804.18 ORF76289 - 0.00043 19.4 0.1 0.00049 19.2 0.1 1.0 1 0 0 1 1 1 1 Penicillin amidase Sdh_cyt PF01127.22 ORF7545 - 4.3e-31 107.5 4.4 5e-31 107.3 4.4 1.0 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Fumarate_red_D PF02313.17 ORF7545 - 0.023 14.8 4.0 0.035 14.2 4.0 1.4 1 0 0 1 1 1 0 Fumarate reductase subunit D TssN PF17555.2 ORF7545 - 0.42 9.9 4.3 0.21 10.9 2.1 1.5 2 0 0 2 2 2 0 Type VI secretion system, TssN DUF2583 PF10762.9 ORF7545 - 9.7 6.7 9.5 3.5 8.1 0.3 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2583) PrcB_C PF14343.6 ORF74312 - 0.088 12.9 0.2 0.18 12.0 0.2 1.5 1 0 0 1 1 1 0 PrcB C-terminal Sigma54_AID PF00309.20 ORF74030 - 0.11 12.3 0.8 0.22 11.4 0.8 1.4 1 0 0 1 1 1 0 Sigma-54 factor, Activator interacting domain (AID) THDPS_M PF14789.6 ORF73666 - 0.026 14.6 0.0 0.081 13.0 0.0 1.8 1 0 0 1 1 1 0 Tetrahydrodipicolinate N-succinyltransferase middle GLTSCR1 PF15249.6 ORF72584 - 0.027 14.9 0.1 0.098 13.1 0.0 1.8 1 1 1 2 2 2 0 Conserved region of unknown function on GLTSCR protein DUF816 PF05674.12 ORF72584 - 0.055 13.4 4.8 0.068 13.1 4.8 1.2 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF816) DUF5043 PF16446.5 ORF72584 - 0.35 10.9 5.9 0.54 10.2 1.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5043) zf-RING_2 PF13639.6 ORF71687 - 1.8e-12 47.4 10.7 2.4e-12 47.0 10.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF71687 - 6.1e-08 32.4 9.8 9.1e-08 31.8 9.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF71687 - 1.1e-07 31.5 8.4 1.1e-07 31.5 8.4 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF71687 - 1.3e-07 31.7 12.0 3.3e-06 27.3 12.0 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF71687 - 1.4e-07 31.3 9.1 2e-07 30.8 9.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF71687 - 8.7e-07 28.8 9.2 1.2e-06 28.4 9.2 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF71687 - 1.2e-05 25.3 3.5 1.2e-05 25.3 3.5 2.0 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF71687 - 0.00011 22.0 9.0 0.00016 21.4 9.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF71687 - 0.0095 15.8 10.2 0.014 15.3 10.2 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF71687 - 0.011 15.8 7.7 0.045 13.8 7.7 1.9 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_4 PF14570.6 ORF71687 - 0.13 12.1 7.2 0.22 11.4 7.2 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain RINGv PF12906.7 ORF71687 - 0.44 10.7 7.8 1.2 9.3 7.8 1.7 1 1 0 1 1 1 0 RING-variant domain Zn_ribbon_17 PF17120.5 ORF71687 - 0.72 9.5 9.6 1.4 8.6 9.6 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type UMP1 PF05348.11 ORF71619 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF71619 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein DUF4476 PF14771.6 ORF69618 - 0.002 18.4 1.7 0.0025 18.1 0.8 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4476) DUF3523 PF12037.8 ORF69618 - 0.0059 16.0 9.1 0.007 15.8 9.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3523) Phage_Mu_Gam PF07352.12 ORF69618 - 0.021 14.8 5.0 0.021 14.8 5.0 2.0 1 1 0 2 2 2 0 Bacteriophage Mu Gam like protein DUF2119 PF09892.9 ORF69618 - 0.04 13.3 2.3 0.05 13.0 1.6 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2119) DUF5376 PF17346.2 ORF69618 - 0.042 14.2 3.8 0.054 13.8 3.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5376) Nore1-SARAH PF16517.5 ORF69618 - 0.05 13.5 6.0 0.32 10.9 0.3 2.6 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Sds3 PF08598.11 ORF69618 - 0.077 13.0 10.3 0.11 12.5 10.0 1.3 1 1 0 1 1 1 0 Sds3-like TruB_N PF01509.18 ORF69618 - 0.09 13.1 0.9 0.11 12.9 0.9 1.2 1 0 0 1 1 1 0 TruB family pseudouridylate synthase (N terminal domain) EF-G-binding_N PF07299.11 ORF69618 - 0.4 11.2 6.3 3 8.4 0.8 2.9 1 1 0 2 2 2 0 Elongation factor G-binding protein, N-terminal IlvC PF01450.19 ORF69618 - 0.4 11.0 3.9 0.48 10.7 3.9 1.2 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain DASH_Dad3 PF08656.10 ORF69618 - 0.62 10.2 5.7 2.3 8.4 4.3 2.4 1 1 1 2 2 2 0 DASH complex subunit Dad3 Phasin PF05597.11 ORF69618 - 0.7 9.9 6.2 3.5 7.6 1.5 2.0 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) PKK PF12474.8 ORF69618 - 0.84 9.8 14.1 0.11 12.6 5.1 2.2 1 1 1 2 2 2 0 Polo kinase kinase YlbD_coat PF14071.6 ORF69618 - 0.96 9.7 9.0 0.13 12.5 2.2 2.0 1 1 1 2 2 2 0 Putative coat protein UMP1 PF05348.11 ORF69616 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF69616 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein AAA_14 PF13173.6 ORF6961 - 0.053 13.6 0.4 0.065 13.3 0.4 1.2 1 0 0 1 1 1 0 AAA domain UMP1 PF05348.11 ORF69598 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF69598 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein Antimicrobial12 PF08107.11 ORF6950 - 0.21 11.3 0.1 0.37 10.6 0.1 1.3 1 0 0 1 1 1 0 Pleurocidin family Sulfotransfer_3 PF13469.6 ORF68040 - 9.1e-10 39.3 0.2 2.3e-09 38.0 0.0 1.6 2 0 0 2 2 2 1 Sulfotransferase family Sulfotransfer_1 PF00685.27 ORF68040 - 5.9e-07 29.2 0.0 6.7e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Prok_Ub PF14454.6 ORF68040 - 0.038 13.6 0.1 0.074 12.7 0.1 1.4 1 0 0 1 1 1 0 Prokaryotic Ubiquitin DUF4679 PF15728.5 ORF67773 - 0.03 13.4 0.3 0.035 13.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) COG4 PF08318.12 ORF67533 - 0.0049 16.0 1.2 0.057 12.5 0.1 2.0 1 1 1 2 2 2 2 COG4 transport protein Histone_H2A_C PF16211.5 ORF66860 - 9.5e-16 57.2 0.1 1.5e-15 56.6 0.1 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 ORF66860 - 6.4e-15 55.7 0.0 7.7e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF66860 - 9.2e-06 25.9 0.0 1.4e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone GDP_Man_Dehyd PF16363.5 ORF66411 - 1e-09 38.2 0.0 1.2e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF66411 - 1.5e-07 31.2 0.0 1.8e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF66411 - 0.0014 17.7 0.0 0.0018 17.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 ORF66411 - 0.0017 18.3 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 ORF66411 - 0.0059 16.1 0.0 0.0071 15.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_4 PF07993.12 ORF66411 - 0.048 12.8 0.0 0.062 12.5 0.0 1.1 1 0 0 1 1 1 0 Male sterility protein DapB_N PF01113.20 ORF66411 - 0.12 12.5 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus MTD PF01993.18 ORF66370 - 0.018 14.4 0.1 0.021 14.1 0.1 1.1 1 0 0 1 1 1 0 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase RCC1 PF00415.18 ORF65283 - 3.1e-20 72.5 0.0 1.7e-09 38.1 0.1 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF65283 - 1.5e-17 62.9 5.0 7.9e-13 47.8 1.5 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Wound_ind PF08186.11 ORF64483 - 0.11 13.0 1.1 0.19 12.2 1.1 1.4 1 0 0 1 1 1 0 Wound-inducible basic protein family His_Phos_2 PF00328.22 ORF64299 - 0.00019 20.9 1.0 0.00025 20.5 1.0 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) ORC4_C PF14629.6 ORF64299 - 0.0076 15.6 0.2 0.0082 15.5 0.2 1.2 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 4 C-terminus DUF3348 PF11828.8 ORF6423 - 2.4e-05 24.1 4.5 3.3e-05 23.7 4.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3348) Seryl_tRNA_N PF02403.22 ORF6423 - 0.00015 21.9 4.3 0.0065 16.7 2.8 2.1 1 1 1 2 2 2 1 Seryl-tRNA synthetase N-terminal domain DUF148 PF02520.17 ORF6423 - 0.00063 19.8 4.1 0.00063 19.8 4.1 1.7 1 1 0 1 1 1 1 Domain of unknown function DUF148 DHR10 PF18595.1 ORF6423 - 0.0019 18.3 9.8 0.061 13.4 5.3 2.2 1 1 1 2 2 2 2 Designed helical repeat protein 10 domain Golgin_A5 PF09787.9 ORF6423 - 0.0019 17.7 9.4 0.0021 17.6 9.4 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 DUF3708 PF12501.8 ORF6423 - 0.0029 17.4 5.4 0.18 11.5 0.5 2.0 1 1 1 2 2 2 2 Phosphate ATP-binding cassette transporter Spc7 PF08317.11 ORF6423 - 0.003 16.5 8.1 0.0036 16.2 8.1 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein TMF_TATA_bd PF12325.8 ORF6423 - 0.0038 17.4 9.0 0.0046 17.2 8.0 1.5 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding APG6_N PF17675.1 ORF6423 - 0.0057 17.2 6.6 0.0077 16.8 6.6 1.3 1 0 0 1 1 1 1 Apg6 coiled-coil region Filament PF00038.21 ORF6423 - 0.015 14.9 8.9 0.13 11.8 5.1 2.0 1 1 1 2 2 2 0 Intermediate filament protein DUF4201 PF13870.6 ORF6423 - 0.021 14.6 6.6 0.14 11.9 0.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) HIP1_clath_bdg PF16515.5 ORF6423 - 0.032 14.8 12.5 0.043 14.4 11.4 1.6 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Syntaxin_2 PF14523.6 ORF6423 - 0.039 14.3 7.5 0.059 13.7 7.4 1.4 1 1 0 1 1 1 0 Syntaxin-like protein GrpE PF01025.19 ORF6423 - 0.039 13.6 2.9 0.049 13.3 2.9 1.2 1 0 0 1 1 1 0 GrpE DUF4315 PF14193.6 ORF6423 - 0.045 13.8 1.5 0.21 11.6 0.7 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4315) DUF3461 PF11944.8 ORF6423 - 0.053 13.6 1.1 0.084 13.0 1.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3461) Gp-FAR-1 PF05823.12 ORF6423 - 0.055 13.8 2.6 0.13 12.6 0.5 2.2 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Mod_r PF07200.13 ORF6423 - 0.08 13.0 10.3 0.58 10.2 2.8 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein FTCD_C PF04961.12 ORF6423 - 0.084 12.6 4.4 0.27 11.0 1.0 2.0 1 1 1 2 2 2 0 Formiminotransferase-cyclodeaminase DUF1664 PF07889.12 ORF6423 - 0.2 11.7 6.6 0.96 9.5 1.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Bap31_Bap29_C PF18035.1 ORF6423 - 0.25 11.4 3.2 1.7 8.7 0.1 2.5 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain COG2 PF06148.11 ORF6423 - 0.32 11.1 4.8 0.7 10.0 3.3 2.0 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 KELK PF15796.5 ORF6423 - 0.33 11.4 6.2 3.3 8.2 1.2 2.4 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase ATG16 PF08614.11 ORF6423 - 0.38 10.9 11.9 1.5 9.0 11.9 1.8 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) FliD_C PF07195.12 ORF6423 - 0.47 9.8 8.7 0.44 9.9 1.6 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus FAM76 PF16046.5 ORF6423 - 0.56 9.5 4.3 0.74 9.1 4.3 1.2 1 0 0 1 1 1 0 FAM76 protein Exonuc_VII_L PF02601.15 ORF6423 - 0.6 9.6 7.7 0.68 9.4 7.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Csm1_N PF18504.1 ORF6423 - 0.68 10.3 7.0 95 3.4 6.5 3.2 1 1 1 2 2 2 0 Csm1 N-terminal domain YabA PF06156.13 ORF6423 - 0.98 10.1 4.6 12 6.6 4.4 2.3 1 1 0 1 1 1 0 Initiation control protein YabA WXG100 PF06013.12 ORF6423 - 1.9 8.7 12.0 2 8.7 0.8 3.2 2 1 0 2 2 2 0 Proteins of 100 residues with WXG FlxA PF14282.6 ORF6423 - 3.2 7.8 14.2 7.3 6.7 13.5 1.9 1 1 0 1 1 1 0 FlxA-like protein HIT PF01230.23 ORF63648 - 1.1e-27 96.6 0.0 1.4e-27 96.3 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 ORF63648 - 2.5e-21 76.3 0.0 3e-21 76.0 0.0 1.0 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding cNMP_binding PF00027.29 ORF63321 - 1.4e-18 66.7 0.0 2e-18 66.3 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain UMP1 PF05348.11 ORF60602 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF60602 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein Ribosomal_S8e PF01201.22 ORF56752 - 0.28 11.3 3.8 0.36 11.0 3.8 1.1 1 0 0 1 1 1 0 Ribosomal protein S8e COP23 PF14218.6 ORF56279 - 0.04 13.7 0.1 0.064 13.0 0.1 1.3 1 0 0 1 1 1 0 Circadian oscillating protein COP23 Trp_syntA PF00290.20 ORF56279 - 0.081 11.8 0.0 0.097 11.5 0.0 1.1 1 0 0 1 1 1 0 Tryptophan synthase alpha chain F5_F8_type_C PF00754.25 ORF55954 - 2.1e-05 24.7 0.0 2.6e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 F5/8 type C domain XRCC1_N PF01834.16 ORF55954 - 0.0018 18.3 0.0 0.0023 18.0 0.0 1.2 1 0 0 1 1 1 1 XRCC1 N terminal domain ANAPC10 PF03256.16 ORF55954 - 0.0023 17.6 0.0 0.0027 17.4 0.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, subunit 10 (APC10) DUF1043 PF06295.12 ORF55335 - 2e-47 160.2 0.2 2.2e-47 160.1 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1043) HemX PF04375.14 ORF55335 - 0.0013 18.1 0.1 0.0015 17.9 0.1 1.1 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3958 PF13125.6 ORF55335 - 0.012 15.8 2.2 0.015 15.4 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) Apolipoprotein PF01442.18 ORF55335 - 0.012 15.5 4.0 0.016 15.1 4.0 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain HrpB7 PF09486.10 ORF55335 - 0.027 14.8 2.0 0.035 14.5 2.0 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) KAP PF05804.12 ORF55335 - 0.069 11.3 0.0 0.078 11.1 0.0 1.0 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) MctB PF11382.8 ORF55335 - 0.11 12.2 0.3 0.17 11.5 0.1 1.4 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB DUF2501 PF10696.9 ORF55335 - 0.13 12.5 0.0 0.23 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2501) DUF4514 PF14986.6 ORF55335 - 0.14 12.1 0.6 0.28 11.2 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4514) Phage_holin_3_6 PF07332.11 ORF55335 - 0.16 12.0 0.2 0.3 11.2 0.2 1.5 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3496 PF12001.8 ORF55335 - 0.26 11.7 2.9 13 6.2 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3496) FAM183 PF14886.6 ORF54695 - 9.9e-18 64.9 1.7 1.4e-17 64.4 1.7 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related Ribosomal_S21 PF01165.20 ORF54695 - 0.049 13.3 0.1 8.2 6.2 0.0 2.3 2 0 0 2 2 2 0 Ribosomal protein S21 DUF563 PF04577.14 ORF54043 - 7.1e-06 26.3 0.4 1.1e-05 25.7 0.2 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF563) MBOAT PF03062.19 ORF53778 - 1.1e-07 31.6 7.8 1.1e-07 31.6 7.8 1.8 1 1 1 2 2 2 1 MBOAT, membrane-bound O-acyltransferase family Tetraspanin PF00335.20 ORF53562 - 0.016 14.9 16.7 0.022 14.5 16.7 1.2 1 0 0 1 1 1 0 Tetraspanin family Adipogenin PF15202.6 ORF53562 - 0.93 9.6 8.2 0.33 11.0 1.6 2.2 2 0 0 2 2 2 0 Adipogenin GWT1 PF06423.12 ORF53562 - 6.6 6.8 7.8 7.6 6.6 7.6 1.3 1 1 0 1 1 1 0 GWT1 UMP1 PF05348.11 ORF53247 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF53247 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein HGTP_anticodon PF03129.20 ORF52757 - 2.8e-25 88.3 1.1 3.7e-25 87.9 1.1 1.1 1 0 0 1 1 1 1 Anticodon binding domain DUF2451 PF10474.9 ORF52757 - 0.094 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2451) MctB PF11382.8 ORF52757 - 0.1 12.3 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB Sugar_tr PF00083.24 ORF50626 - 4.6e-05 22.5 0.0 4.7e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter m04gp34like PF12216.8 ORF50626 - 0.041 13.5 0.3 0.051 13.1 0.3 1.1 1 0 0 1 1 1 0 Immune evasion protein DUF3169 PF11368.8 ORF50626 - 0.08 12.4 0.1 0.1 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) GTP_EFTU_D3 PF03143.17 ORF50503 - 7.2e-17 61.7 0.1 1.3e-16 60.9 0.1 1.4 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain TRADD_N PF09034.10 ORF49820 - 0.001 19.1 0.4 0.0014 18.7 0.4 1.3 1 0 0 1 1 1 1 TRADD, N-terminal domain Peptidase_C50 PF03568.17 ORF49820 - 0.013 14.6 1.4 0.014 14.5 1.4 1.0 1 0 0 1 1 1 0 Peptidase family C50 Mito_carr PF00153.27 ORF49728 - 8.2e-17 60.9 0.0 1e-16 60.6 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein GDP_Man_Dehyd PF16363.5 ORF48176 - 1e-09 38.2 0.0 1.2e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF48176 - 1.5e-07 31.2 0.0 1.8e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF48176 - 0.0014 17.7 0.0 0.0018 17.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 ORF48176 - 0.0017 18.3 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 ORF48176 - 0.0059 16.1 0.0 0.0071 15.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_4 PF07993.12 ORF48176 - 0.048 12.8 0.0 0.062 12.5 0.0 1.1 1 0 0 1 1 1 0 Male sterility protein DapB_N PF01113.20 ORF48176 - 0.12 12.5 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus EF-hand_7 PF13499.6 ORF47940 - 2e-13 50.6 0.4 4e-13 49.6 0.4 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF47940 - 1.3e-11 43.2 0.3 0.00014 21.2 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF47940 - 3.4e-11 42.1 0.6 0.00023 20.5 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF47940 - 1.9e-10 39.8 0.2 0.00077 19.2 0.1 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF47940 - 9.6e-10 38.2 0.4 6.7e-08 32.3 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF47940 - 0.00017 21.9 2.0 0.00032 21.0 1.8 1.5 1 1 1 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region DUF3818 PF12825.7 ORF47940 - 0.012 14.6 3.4 0.015 14.3 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function in PX-proteins (DUF3818) LCE6A PF15858.5 ORF47858 - 6.4 7.6 10.3 1.3 9.9 4.0 2.1 2 0 0 2 2 2 0 Late cornified envelope protein 6A family RnlB_antitoxin PF15933.5 ORF4748 - 0.0041 17.4 4.0 0.015 15.5 0.2 2.1 2 0 0 2 2 2 2 Antitoxin to bacterial toxin RNase LS or RnlA DUF179 PF02622.15 ORF47115 - 1.6e-07 31.4 0.2 2.1e-07 31.0 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 EF-hand_6 PF13405.6 ORF45971 - 0.023 14.6 0.0 0.4 10.7 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 ORF45971 - 0.033 13.7 0.0 1.1 8.9 0.0 2.3 2 0 0 2 2 2 0 EF hand EF-hand_7 PF13499.6 ORF45971 - 0.15 12.6 1.1 0.33 11.4 0.4 2.0 2 1 0 2 2 2 0 EF-hand domain pair Ank_2 PF12796.7 ORF45242 - 5e-26 91.1 0.3 6.1e-15 55.6 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF45242 - 1.1e-24 86.5 1.2 1.7e-08 34.8 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF45242 - 1.5e-21 75.8 5.7 2.6e-05 24.4 0.0 4.2 4 0 0 4 4 4 4 Ankyrin repeat Ank_5 PF13857.6 ORF45242 - 1.1e-20 73.4 3.4 4.7e-07 30.0 0.1 4.0 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF45242 - 2e-18 64.5 0.3 1.2e-05 25.3 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF44786 - 0.00032 21.2 0.1 0.0015 19.1 0.1 2.0 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF44786 - 0.0037 17.8 0.0 0.0056 17.2 0.0 1.3 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF44786 - 0.0049 17.3 0.3 0.1 13.2 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 ORF44786 - 0.005 17.2 0.2 0.18 12.3 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeat RIIa PF02197.17 ORF44368 - 0.02 14.6 0.2 0.035 13.8 0.2 1.4 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit EF-hand_6 PF13405.6 ORF44368 - 0.021 14.7 0.0 0.074 13.0 0.0 2.0 1 0 0 1 1 1 0 EF-hand domain Ins_allergen_rp PF06757.13 ORF44368 - 0.04 13.9 0.9 0.11 12.5 0.1 1.8 2 0 0 2 2 2 0 Insect allergen related repeat, nitrile-specifier detoxification DNA_pol3_delt_C PF14840.6 ORF44368 - 0.086 13.2 0.2 0.29 11.5 0.1 1.8 1 1 1 2 2 2 0 Processivity clamp loader gamma complex DNA pol III C-term SapB_1 PF05184.15 ORF44368 - 0.17 11.9 0.3 0.17 11.9 0.3 1.9 2 0 0 2 2 2 0 Saposin-like type B, region 1 vATP-synt_E PF01991.18 ORF44334 - 1.7e-19 70.0 13.7 1.9e-19 69.9 13.7 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit T3SS_HrpK1 PF16937.5 ORF44334 - 0.021 14.5 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Type III secretion system translocator protein, HrpF DUF1842 PF08896.10 ORF43886 - 0.066 13.5 0.0 0.084 13.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1842) ABC_tran PF00005.27 ORF43383 - 1.6e-11 44.8 0.0 1.9e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF43383 - 0.0018 18.2 0.1 0.0018 18.1 0.1 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system CCDC92 PF14916.6 ORF43383 - 0.12 12.2 0.1 0.26 11.1 0.1 1.5 1 0 0 1 1 1 0 Coiled-coil domain of unknown function Ribosomal_L37 PF08561.10 ORF43256 - 0.29 11.6 4.4 5.5 7.5 1.7 2.1 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L37 Pkinase PF00069.25 ORF43227 - 8.1e-06 25.4 0.0 1.2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF43227 - 0.081 12.2 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase DASH_Spc34 PF08657.10 ORF42757 - 0.021 14.6 2.4 0.026 14.3 2.4 1.2 1 0 0 1 1 1 0 DASH complex subunit Spc34 Uteroglobin PF01099.17 ORF42757 - 0.085 13.2 0.4 0.33 11.3 0.1 2.2 1 1 0 2 2 2 0 Uteroglobin family Myb_DNA-binding PF00249.31 ORF42347 - 2.5e-08 34.0 0.0 4e-08 33.3 0.0 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF42347 - 0.015 15.6 0.0 0.037 14.3 0.0 1.7 1 0 0 1 1 1 0 Myb-like DNA-binding domain AAA_25 PF13481.6 ORF42101 - 0.035 13.7 0.0 0.046 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain Ank_5 PF13857.6 ORF4180 - 1.8e-05 24.9 0.0 0.00012 22.2 0.0 2.2 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF4180 - 0.00021 21.8 0.0 0.00081 19.9 0.0 2.0 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF4180 - 0.00034 20.9 0.0 1.9 9.1 0.0 3.1 2 1 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF4180 - 0.031 14.9 0.0 0.14 12.7 0.0 2.2 2 1 0 2 2 2 0 Ankyrin repeats (many copies) ATP_bind_1 PF03029.17 ORF41743 - 6e-51 173.6 0.0 6.5e-51 173.4 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_18 PF13238.6 ORF41743 - 0.0026 18.3 0.0 0.0044 17.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF41743 - 0.017 14.8 0.0 0.017 14.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF41743 - 0.033 14.4 0.1 0.16 12.2 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF41743 - 0.054 13.9 0.0 0.11 12.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF41743 - 0.16 11.7 0.1 0.31 10.8 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Cytidylate_kin PF02224.18 ORF41743 - 0.21 11.3 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Cytidylate kinase AAA_33 PF13671.6 ORF41743 - 0.24 11.6 0.0 0.33 11.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain Ribosomal_L32e PF01655.18 ORF40852 - 9.6e-40 135.4 1.0 1.2e-39 135.1 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L20 PF00453.18 ORF40852 - 0.22 11.6 5.7 0.25 11.4 5.4 1.3 1 1 0 1 1 1 0 Ribosomal protein L20 VPS13 PF16908.5 ORF40146 - 0.044 13.6 0.1 0.05 13.4 0.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting-associated protein 13, N-terminal CENP-M PF11111.8 ORF40146 - 0.098 11.9 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Centromere protein M (CENP-M) Dehydrin PF00257.19 ORF4010 - 4.3 7.9 7.0 6.8 7.2 7.0 1.3 1 0 0 1 1 1 0 Dehydrin Bestrophin PF01062.21 ORF39722 - 0.039 13.3 1.7 0.061 12.7 1.7 1.3 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel DUF2484 PF10658.9 ORF39722 - 1.9 8.8 11.0 0.71 10.2 6.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2484) Say1_Mug180 PF10340.9 ORF37338 - 0.13 11.1 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Steryl acetyl hydrolase G10 PF01125.17 ORF37255 - 7.8e-54 181.4 9.6 8.7e-54 181.3 9.6 1.0 1 0 0 1 1 1 1 G10 protein KIAA1430 PF13879.6 ORF36835 - 2.8e-21 76.2 7.2 3.7e-21 75.8 7.2 1.2 1 0 0 1 1 1 1 KIAA1430 homologue PHM7_cyt PF14703.6 ORF36835 - 2 8.7 6.5 6.5 7.0 6.5 1.8 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter AvrRpt-cleavage PF05627.11 ORF36615 - 0.37 10.2 0.8 0.63 9.4 0.8 1.3 1 0 0 1 1 1 0 Cleavage site for pathogenic type III effector avirulence factor Avr OFeT_1 PF16955.5 ORF35923 - 0.073 12.8 0.0 0.096 12.4 0.0 1.1 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter PPDK_N PF01326.19 ORF35238 - 0.0062 15.8 0.1 0.0075 15.6 0.1 1.1 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Peripla_BP_2 PF01497.18 ORF35203 - 0.42 10.1 2.0 2.1 7.8 0.6 2.0 1 1 1 2 2 2 0 Periplasmic binding protein CD225 PF04505.12 ORF34720 - 0.015 15.4 0.5 0.39 10.9 0.0 2.4 2 0 0 2 2 2 0 Interferon-induced transmembrane protein SPRY PF00622.28 ORF3458 - 2.3e-10 40.6 0.0 3.6e-10 40.0 0.0 1.3 1 0 0 1 1 1 1 SPRY domain YebG PF07130.12 ORF33511 - 0.055 13.3 0.9 0.086 12.7 0.9 1.3 1 0 0 1 1 1 0 YebG protein Alba PF01918.21 ORF33511 - 0.067 13.0 0.4 0.13 12.1 0.4 1.5 1 0 0 1 1 1 0 Alba UMP1 PF05348.11 ORF33432 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF33432 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein S_layer_N PF05123.12 ORF32299 - 0.016 15.1 0.2 0.017 15.0 0.2 1.0 1 0 0 1 1 1 0 S-layer like family, N-terminal region DivIC PF04977.15 ORF31079 - 0.73 9.6 5.2 1.2 9.0 1.8 2.4 2 1 0 2 2 2 0 Septum formation initiator DASH_Dam1 PF08653.10 ORF31079 - 1 9.2 3.9 1 9.2 1.0 2.2 2 0 0 2 2 2 0 DASH complex subunit Dam1 DUF3574 PF12098.8 ORF30442 - 0.019 14.8 0.0 0.027 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3574) DUF3731 PF12531.8 ORF29603 - 0.095 12.5 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 DNA-K related protein S-AdoMet_synt_C PF02773.16 ORF29603 - 0.14 12.1 0.1 0.2 11.7 0.1 1.2 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain DUF2632 PF10943.8 ORF29401 - 0.0036 16.9 0.6 0.006 16.2 0.4 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2632) Mon2_C PF16206.5 ORF27445 - 0.00024 19.4 0.2 0.00024 19.4 0.2 1.0 1 0 0 1 1 1 1 C-terminal region of Mon2 protein DUF760 PF05542.11 ORF27445 - 0.067 13.6 0.2 0.14 12.5 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF760) TetR_C_2 PF08361.11 ORF23479 - 0.079 13.1 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 MAATS-type transcriptional repressor, C-terminal region Reprolysin_3 PF13582.6 ORF22497 - 0.15 12.6 0.1 0.23 12.0 0.1 1.5 1 1 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Takusan PF04822.13 ORF22497 - 0.9 9.5 6.3 3.8 7.4 6.3 1.9 1 1 0 1 1 1 0 Takusan DIMCO_N PF16844.5 ORF21963 - 0.07 13.5 0.0 1.1 9.6 0.0 2.0 2 0 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor, N-terminal UMP1 PF05348.11 ORF20221 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF20221 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein Flg_bbr_C PF06429.13 ORF1975 - 1.8e-12 47.2 1.6 1.8e-12 47.2 1.6 1.7 1 1 1 2 2 2 1 Flagellar basal body rod FlgEFG protein C-terminal Flg_bb_rod PF00460.20 ORF1975 - 1.3e-10 41.0 1.7 1.3e-10 41.0 1.7 1.9 2 0 0 2 2 2 1 Flagella basal body rod protein Collagen PF01391.18 ORF19208 - 7.1 6.5 22.1 2.3 8.0 2.4 2.3 2 0 0 2 2 2 0 Collagen triple helix repeat (20 copies) TRP PF06011.12 ORF17934 - 0.0071 15.1 2.8 0.0084 14.9 2.8 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Vma12 PF11712.8 ORF17934 - 0.18 11.9 1.5 0.27 11.3 1.5 1.3 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF4181 PF13789.6 ORF17934 - 0.28 11.5 6.4 1.7 8.9 6.4 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4181) SHOCT PF09851.9 ORF17571 - 4e-05 23.2 1.5 9.5e-05 22.0 1.1 1.9 1 1 1 2 2 2 1 Short C-terminal domain GrpE PF01025.19 ORF17571 - 0.056 13.1 3.8 0.071 12.8 3.8 1.1 1 0 0 1 1 1 0 GrpE DUF1542 PF07564.11 ORF17571 - 0.16 12.1 3.0 0.25 11.4 3.0 1.4 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1542) Styelin PF17562.2 ORF17571 - 2.5 8.5 6.9 3.3 8.1 1.4 3.0 1 1 2 3 3 3 0 Styelin Pkinase PF00069.25 ORF17458 - 1.9e-05 24.2 0.0 4.2e-05 23.0 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain vATP-synt_E PF01991.18 ORF17343 - 1.7e-19 70.0 13.7 1.9e-19 69.9 13.7 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit T3SS_HrpK1 PF16937.5 ORF17343 - 0.021 14.5 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Type III secretion system translocator protein, HrpF Ribosomal_L26 PF16906.5 ORF17143 - 4.8e-40 135.9 3.6 6.3e-40 135.5 3.6 1.2 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 ORF17143 - 7.9e-08 32.0 2.0 7.9e-08 32.0 2.0 2.2 2 0 0 2 2 2 1 KOW motif Lipocalin_9 PF17186.4 ORF17143 - 0.053 13.8 0.0 0.061 13.6 0.0 1.4 1 0 0 1 1 1 0 Lipocalin-like domain Methyltrans_RNA PF04452.14 ORF17143 - 0.093 12.1 0.2 0.11 11.8 0.2 1.2 1 0 0 1 1 1 0 RNA methyltransferase ADP_ribosyl_GH PF03747.14 ORF16981 - 6.5e-14 52.3 0.1 8.5e-14 52.0 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase EF-hand_1 PF00036.32 ORF16489 - 7.9e-32 106.4 9.9 4.1e-08 32.2 0.3 4.3 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF16489 - 5.7e-27 94.0 2.4 4.6e-14 52.6 0.9 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF16489 - 3e-25 85.9 5.8 2.7e-07 30.0 0.1 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF16489 - 1.1e-22 78.4 7.8 1.8e-07 30.3 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF16489 - 6.7e-20 70.7 7.4 8.6e-09 35.1 0.0 4.1 3 1 1 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF16489 - 2.9e-10 40.5 0.2 0.00015 22.0 0.1 2.2 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF16489 - 0.00041 20.3 4.1 0.14 12.1 2.0 3.0 1 1 1 3 3 3 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF16489 - 0.0041 17.4 0.2 0.11 12.9 0.1 2.8 2 2 0 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF16489 - 0.011 15.6 0.8 4.6 7.1 0.0 3.0 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF16489 - 0.012 15.8 1.5 16 5.8 0.0 3.7 3 1 0 3 3 3 0 Dockerin type I domain EF-hand_13 PF17958.1 ORF16489 - 0.017 14.9 0.0 0.11 12.3 0.0 2.3 2 1 1 3 3 3 0 EF-hand domain Endonuc_Holl PF10107.9 ORF14890 - 3.7 7.4 15.3 0.32 10.8 10.7 1.6 2 0 0 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase Frataxin_Cyay PF01491.16 ORF14586 - 0.083 13.0 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Frataxin-like domain VPS13 PF16908.5 ORF1331 - 0.044 13.6 0.1 0.05 13.4 0.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting-associated protein 13, N-terminal CENP-M PF11111.8 ORF1331 - 0.098 11.9 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Centromere protein M (CENP-M) KIAA1430 PF13879.6 ORF11964 - 2.8e-21 76.2 7.2 3.7e-21 75.8 7.2 1.2 1 0 0 1 1 1 1 KIAA1430 homologue PHM7_cyt PF14703.6 ORF11964 - 2 8.7 6.5 6.5 7.0 6.5 1.8 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Methyltransf_24 PF13578.6 ORF11908 - 3.1e-09 37.8 0.0 4.7e-09 37.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain GLTSCR1 PF15249.6 ORF11820 - 0.027 14.9 0.1 0.098 13.1 0.0 1.8 1 1 1 2 2 2 0 Conserved region of unknown function on GLTSCR protein DUF816 PF05674.12 ORF11820 - 0.055 13.4 4.8 0.068 13.1 4.8 1.2 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF816) DUF5043 PF16446.5 ORF11820 - 0.35 10.9 5.9 0.54 10.2 1.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5043) ADSL_C PF10397.9 ORF11431 - 0.31 11.6 3.9 0.15 12.7 0.9 1.9 2 0 0 2 2 2 0 Adenylosuccinate lyase C-terminus DUF1754 PF08555.10 ORF11431 - 0.34 11.7 18.1 0.5 11.2 18.1 1.3 1 0 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) ALMT PF11744.8 ORF11431 - 5.2 5.8 6.6 5.7 5.7 6.6 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter TBPIP PF07106.13 ORF11407 - 0.1 12.6 0.0 0.24 11.3 0.0 1.7 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain Ank_4 PF13637.6 ORF110456 - 1.6e-06 28.5 0.2 0.087 13.4 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF110456 - 0.00049 20.6 0.3 0.0014 19.1 0.3 1.9 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF110456 - 0.0083 16.6 0.0 8.6 7.3 0.0 2.9 3 1 0 3 3 3 2 Ankyrin repeat Sec62 PF03839.16 ORF110325 - 6 6.3 8.5 9 5.7 8.5 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 Smr PF01713.21 ORF109878 - 4.1e-12 46.3 0.0 7e-12 45.5 0.0 1.3 1 0 0 1 1 1 1 Smr domain Peripla_BP_2 PF01497.18 ORF109797 - 0.42 10.1 2.0 2.1 7.8 0.6 2.0 1 1 1 2 2 2 0 Periplasmic binding protein Aa_trans PF01490.18 ORF109284 - 3.8e-08 32.5 0.9 4.2e-08 32.3 0.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF109284 - 0.014 14.4 0.8 0.017 14.2 0.8 1.1 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family DUF4149 PF13664.6 ORF109284 - 0.022 15.1 0.1 0.029 14.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4149) GDP_Man_Dehyd PF16363.5 ORF109097 - 1e-09 38.2 0.0 1.2e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF109097 - 1.5e-07 31.2 0.0 1.8e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF109097 - 0.0014 17.7 0.0 0.0018 17.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 ORF109097 - 0.0017 18.3 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 ORF109097 - 0.0059 16.1 0.0 0.0071 15.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_4 PF07993.12 ORF109097 - 0.048 12.8 0.0 0.062 12.5 0.0 1.1 1 0 0 1 1 1 0 Male sterility protein DapB_N PF01113.20 ORF109097 - 0.12 12.5 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus HNH PF01844.23 ORF105887 - 0.25 11.5 3.0 0.15 12.2 0.9 1.7 2 0 0 2 2 2 0 HNH endonuclease DUF2541 PF10807.8 ORF105832 - 1.2e-64 216.2 0.8 1.4e-64 216.0 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2541) Pkinase PF00069.25 ORF105814 - 1.7e-44 152.1 0.0 1.9e-44 152.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105814 - 3.3e-23 82.3 0.0 3.6e-23 82.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF105814 - 0.00025 21.1 0.0 0.00046 20.2 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF105814 - 0.002 17.1 0.1 0.0021 17.1 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Choline_kinase PF01633.20 ORF105814 - 0.0092 15.6 0.7 0.024 14.2 0.2 1.7 1 1 0 2 2 2 1 Choline/ethanolamine kinase Seadorna_VP7 PF07387.11 ORF105814 - 0.021 13.9 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Pox_ser-thr_kin PF05445.11 ORF105814 - 0.036 13.1 0.1 0.042 12.8 0.1 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Kdo PF06293.14 ORF105814 - 0.071 12.5 0.0 0.078 12.3 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF105814 - 0.11 11.3 0.0 0.13 11.0 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase zf-H2C2_2 PF13465.6 ORF104922 - 5.7e-07 29.7 0.5 5.7e-07 29.7 0.5 3.3 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF104922 - 7.8e-07 29.2 12.6 0.00099 19.4 4.7 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF104922 - 0.0005 20.7 10.8 0.015 16.0 4.2 2.7 2 0 0 2 2 2 2 C2H2-type zinc finger GAGA PF09237.11 ORF104922 - 0.0037 17.0 1.2 0.0075 16.0 1.2 1.6 1 1 0 1 1 1 1 GAGA factor zf-C2H2_8 PF15909.5 ORF104922 - 0.0093 16.3 3.9 0.012 15.9 3.9 1.3 1 0 0 1 1 1 1 C2H2-type zinc ribbon ADH_N PF08240.12 ORF104922 - 0.035 14.0 0.2 0.048 13.6 0.2 1.2 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain zf-C2H2_6 PF13912.6 ORF104922 - 0.094 12.8 8.0 3.4 7.8 4.8 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-met PF12874.7 ORF104922 - 1.4 9.5 10.6 0.17 12.3 2.1 3.2 2 1 1 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF104922 - 5.9 7.3 11.7 47 4.4 6.4 3.3 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding DUF5437 PF17505.2 ORF103844 - 0.082 12.9 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5437) RAM PF15320.6 ORF103493 - 0.13 12.9 6.0 0.19 12.3 6.0 1.3 1 0 0 1 1 1 0 mRNA cap methylation, RNMT-activating mini protein Rrn6 PF10214.9 ORF103493 - 0.36 9.3 7.9 0.36 9.3 7.9 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor U1snRNP70_N PF12220.8 ORF103493 - 0.88 10.2 8.3 1.4e+02 3.2 8.3 2.1 1 1 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal IF-2B PF01008.17 ORF102851 - 0.086 12.0 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Initiation factor 2 subunit family EFG_C PF00679.24 ORF102727 - 2.4e-21 75.6 0.0 3.6e-21 75.0 0.0 1.3 1 0 0 1 1 1 1 Elongation factor G C-terminus NAGLU_N PF12971.7 ORF102727 - 0.091 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain Metallophos PF00149.28 ORF102649 - 0.0026 18.3 0.0 0.0042 17.6 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase UMP1 PF05348.11 ORF10249 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF10249 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein DUF2207 PF09972.9 ORF101572 - 0.36 9.5 5.6 0.38 9.5 5.6 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ERGIC_N PF13850.6 ORF100727 - 0.041 14.2 0.3 0.041 14.2 0.3 2.5 2 1 1 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TPR_3 PF07720.12 ORF100727 - 0.21 11.6 0.1 0.21 11.6 0.1 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat DHHC PF01529.20 ORF100727 - 6.2 6.9 19.3 3.5 7.7 11.9 2.0 1 1 1 2 2 2 0 DHHC palmitoyltransferase ubiquitin PF00240.23 ORF10003 - 1.8e-11 43.6 1.4 0.00016 21.3 0.5 2.7 2 1 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF10003 - 9.5e-07 28.6 3.7 0.022 14.6 1.5 2.4 2 1 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF10003 - 0.00085 19.3 0.5 0.44 10.6 0.0 2.9 3 0 0 3 3 3 1 Ubiquitin-like domain SH3_9 PF14604.6 ORF10003 - 0.0016 18.3 0.0 0.0025 17.6 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF10003 - 0.007 16.0 0.8 0.012 15.2 0.1 1.7 2 0 0 2 2 2 1 SH3 domain Nudc_N PF14050.6 NODE_47978_length_397_cov_1.806630_g40115_i0forward_frame_1 - 0.016 15.2 0.2 0.038 14.0 0.2 1.6 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. TMEM82 PF15816.5 NODE_47972_length_397_cov_2.359116_g40109_i0reverse_frame_1 - 0.053 12.5 0.1 0.063 12.3 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 82 UPF0242 PF06785.11 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.0026 17.9 6.6 0.0035 17.5 6.6 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus CortBP2 PF09727.9 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.024 14.6 7.3 0.029 14.3 7.3 1.1 1 0 0 1 1 1 0 Cortactin-binding protein-2 Nup88 PF10168.9 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.027 12.3 4.8 0.03 12.2 4.8 1.0 1 0 0 1 1 1 0 Nuclear pore component TPR_MLP1_2 PF07926.12 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.071 13.2 9.1 0.24 11.4 9.1 1.7 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein bZIP_1 PF00170.21 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.15 12.2 5.9 0.37 10.9 1.5 2.3 1 1 1 2 2 2 0 bZIP transcription factor SlyX PF04102.12 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.2 12.3 7.1 3 8.5 0.2 2.2 1 1 1 2 2 2 0 SlyX HMMR_N PF15905.5 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.2 11.1 9.4 0.27 10.7 9.4 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DivIC PF04977.15 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 6.2 6.7 9.8 6.4 6.6 0.5 2.2 1 1 1 2 2 2 0 Septum formation initiator PriA_C PF18074.1 NODE_47967_length_397_cov_2.748619_g40104_i0forward_frame_1 - 0.12 13.2 0.4 0.22 12.4 0.4 1.5 1 1 0 1 1 1 0 Primosomal protein N C-terminal domain SSP160 PF06933.11 NODE_47965_length_397_cov_2.828729_g40102_i0reverse_frame_1 - 0.026 12.8 0.0 0.031 12.5 0.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Aa_trans PF01490.18 NODE_47961_length_397_cov_3.566298_g40098_i0reverse_frame_1 - 4.9e-18 65.0 2.0 5.5e-18 64.9 2.0 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein WRC PF08879.10 NODE_47948_length_397_cov_58.160221_g40085_i0reverse_frame_1 - 0.5 10.1 3.5 1.5 8.5 3.5 1.9 1 1 0 1 1 1 0 WRC CENP-T_C PF15511.6 NODE_47936_length_397_cov_93.726519_g40073_i0forward_frame_1 - 0.11 12.6 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold Tetraspanin PF00335.20 NODE_47928_length_397_cov_126.558011_g40065_i0forward_frame_1 - 0.15 11.7 1.3 0.14 11.8 1.3 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF5374 PF17344.2 NODE_47927_length_397_cov_126.743094_g40064_i0reverse_frame_1 - 0.0029 17.5 0.9 0.0047 16.8 0.9 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5374) MORN_2 PF07661.13 NODE_47919_length_397_cov_222.303867_g40056_i0reverse_frame_1 - 4.6 7.8 14.5 9.1 6.9 2.2 3.8 3 1 0 3 3 3 0 MORN repeat variant Tctex-1 PF03645.13 NODE_47916_length_397_cov_319.577348_g40053_i0forward_frame_1 - 2e-24 85.8 0.2 2.5e-24 85.5 0.2 1.1 1 0 0 1 1 1 1 Tctex-1 family NapE PF06796.11 NODE_47909_length_397_cov_5640.524862_g37710_i2forward_frame_1 - 0.21 11.2 2.3 0.41 10.2 2.3 1.5 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE Curto_V2 PF07325.11 NODE_47903_length_398_cov_1.713499_g40043_i0forward_frame_1 - 0.54 10.1 4.3 0.87 9.5 4.3 1.3 1 0 0 1 1 1 0 Curtovirus V2 protein CotJB PF12652.7 NODE_47899_length_398_cov_2.068871_g40039_i0reverse_frame_1 - 0.045 14.0 0.2 0.96 9.7 0.0 2.2 2 0 0 2 2 2 0 CotJB protein zf-C2H2 PF00096.26 NODE_47891_length_398_cov_4.165289_g40031_i0forward_frame_1 - 2.2e-06 27.8 4.3 0.0058 17.0 0.4 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_47891_length_398_cov_4.165289_g40031_i0forward_frame_1 - 0.0044 17.8 3.4 0.37 11.7 0.3 2.6 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_aberr PF17017.5 NODE_47891_length_398_cov_4.165289_g40031_i0forward_frame_1 - 0.022 14.9 2.7 0.037 14.2 0.4 1.9 1 1 1 2 2 2 0 Aberrant zinc-finger FOXP-CC PF16159.5 NODE_47891_length_398_cov_4.165289_g40031_i0forward_frame_1 - 0.094 13.4 2.6 0.24 12.1 2.5 1.8 1 1 0 1 1 1 0 FOXP coiled-coil domain MFS_1_like PF12832.7 NODE_47884_length_398_cov_56.360882_g40024_i0forward_frame_1 - 0.016 14.1 0.4 0.021 13.7 0.4 1.2 1 0 0 1 1 1 0 MFS_1 like family RCC1_2 PF13540.6 NODE_47874_length_398_cov_94.515152_g40014_i0forward_frame_1 - 1.5e-05 24.6 0.1 0.077 12.8 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Shisa PF13908.6 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 0.021 15.1 0.1 0.025 14.8 0.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Neur_chan_memb PF02932.16 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 0.032 14.3 1.6 0.037 14.1 1.6 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region SID-1_RNA_chan PF13965.6 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 0.064 11.7 3.1 0.069 11.6 3.1 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF3051 PF11252.8 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 0.065 12.9 0.0 0.083 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3051) DUF4834 PF16118.5 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 8.6 7.4 12.1 30 5.6 12.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) SYCP2_ARLD PF18581.1 NODE_47866_length_398_cov_138.275482_g40006_i0reverse_frame_1 - 0.028 14.4 0.3 0.051 13.6 0.1 1.5 2 0 0 2 2 2 0 Synaptonemal complex 2 armadillo-repeat-like domain ZIP4_domain PF18292.1 NODE_47858_length_398_cov_202.319559_g39998_i0forward_frame_1 - 0.02 14.8 0.4 0.024 14.5 0.4 1.2 1 0 0 1 1 1 0 Zinc transporter ZIP4 domain DUF3051 PF11252.8 NODE_47858_length_398_cov_202.319559_g39998_i0forward_frame_1 - 0.075 12.7 0.0 0.084 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3051) DHHC PF01529.20 NODE_47842_length_399_cov_1.890110_g39984_i0reverse_frame_1 - 6.2e-16 58.7 5.7 7.2e-16 58.5 5.7 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks171.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks171.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks171.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks171.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SHIPPO-rpt PF07004.12 NODE_47831_length_399_cov_2.826923_g39973_i0forward_frame_1 - 0.00082 20.2 3.6 0.84 10.7 0.5 2.8 2 1 0 2 2 2 2 Sperm-tail PG-rich repeat Trehalase PF01204.18 NODE_47829_length_399_cov_2.969780_g39971_i0reverse_frame_1 - 4.8e-46 157.7 2.6 5.2e-46 157.5 2.6 1.0 1 0 0 1 1 1 1 Trehalase OppC_N PF12911.7 NODE_47818_length_399_cov_8.282967_g39961_i0forward_frame_1 - 1.9 8.5 9.7 2 8.5 0.6 3.4 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C DAGK_acc PF00609.19 NODE_47817_length_399_cov_33.252747_g39960_i0reverse_frame_1 - 0.21 11.9 0.0 0.26 11.6 0.0 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase accessory domain MTCP1 PF08991.10 NODE_47810_length_399_cov_62.750000_g39953_i0forward_frame_1 - 1.1 9.5 4.4 0.46 10.8 0.4 2.0 2 0 0 2 2 2 0 Mature-T-Cell Proliferation I type CUTL PF16557.5 NODE_47806_length_399_cov_83.692308_g39949_i0reverse_frame_1 - 0.004 17.3 0.1 0.0074 16.4 0.1 1.4 1 0 0 1 1 1 1 CUT1-like DNA-binding domain of SATB NCBP3 PF10309.9 NODE_47800_length_399_cov_97.909341_g39943_i0reverse_frame_1 - 0.0039 17.0 0.1 1.2 9.0 0.0 2.4 2 0 0 2 2 2 2 Nuclear cap-binding protein subunit 3 AF-4 PF05110.13 NODE_47799_length_399_cov_97.912088_g39942_i0forward_frame_1 - 3.8 5.5 9.4 4.1 5.4 9.4 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein zf-C2H2 PF00096.26 NODE_47797_length_399_cov_103.769231_g39940_i0reverse_frame_1 - 5e-10 39.3 12.2 0.00049 20.4 1.4 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_47797_length_399_cov_103.769231_g39940_i0reverse_frame_1 - 3.8e-07 30.4 9.6 0.063 14.1 0.6 3.4 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_47797_length_399_cov_103.769231_g39940_i0reverse_frame_1 - 0.0032 17.8 16.0 0.009 16.4 0.2 3.9 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_6 PF13912.6 NODE_47797_length_399_cov_103.769231_g39940_i0reverse_frame_1 - 4.6 7.3 8.5 2.5 8.2 0.2 3.2 3 0 0 3 3 3 0 C2H2-type zinc finger DUSP PF06337.12 NODE_47792_length_399_cov_111.936813_g39935_i0reverse_frame_1 - 0.077 13.6 0.4 0.13 12.9 0.4 1.4 1 1 0 1 1 1 0 DUSP domain Herpes_UL1 PF05259.11 NODE_47790_length_399_cov_126.260989_g39933_i0forward_frame_1 - 0.024 14.7 0.0 0.4 10.8 0.0 2.1 2 0 0 2 2 2 0 Herpesvirus glycoprotein L OSTbeta PF15048.6 NODE_47788_length_399_cov_128.939560_g39931_i0reverse_frame_1 - 0.25 11.5 0.9 0.34 11.0 0.9 1.1 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein zf-H2C2_2 PF13465.6 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 2.7e-11 43.3 12.8 5.9e-06 26.5 0.6 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 2.8e-07 30.6 15.2 0.0023 18.3 0.2 3.2 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 1.8e-06 28.3 14.5 0.0037 18.0 4.5 3.2 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.097 13.0 7.1 0.26 11.6 6.9 1.7 1 1 0 1 1 1 0 C2H2-type zinc ribbon zf-H2C2_5 PF13909.6 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.19 11.5 18.2 0.88 9.4 0.3 3.5 3 1 0 3 3 3 0 C2H2-type zinc-finger domain zf-C2H2_11 PF16622.5 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.2 11.4 4.4 0.12 12.1 1.7 1.9 2 0 0 2 2 2 0 zinc-finger C2H2-type MgsA_C PF12002.8 NODE_47778_length_399_cov_1050.895604_g38381_i1reverse_frame_1 - 0.2 11.6 1.0 0.23 11.4 1.0 1.1 1 0 0 1 1 1 0 MgsA AAA+ ATPase C terminal SR-25 PF10500.9 NODE_47775_length_399_cov_5926.554945_g39919_i0reverse_frame_1 - 0.097 12.3 7.7 0.23 11.0 2.2 2.1 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein DUF2478 PF10649.9 NODE_47775_length_399_cov_5926.554945_g39919_i0forward_frame_1 - 0.12 12.0 0.4 0.91 9.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2478) BRI3BP PF14965.6 NODE_47771_length_400_cov_1.424658_g39915_i0reverse_frame_2 - 0.028 14.0 13.3 0.025 14.1 2.9 2.1 1 1 1 2 2 2 0 Negative regulator of p53/TP53 Ni_hydr_CYTB PF01292.20 NODE_47767_length_400_cov_1.876712_g39911_i0reverse_frame_3 - 1.5e-07 31.2 7.5 1.9e-07 30.9 7.5 1.1 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4293 PF14126.6 NODE_47767_length_400_cov_1.876712_g39911_i0reverse_frame_3 - 0.042 14.1 2.1 0.047 13.9 0.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4293) Rz1 PF06085.11 NODE_47767_length_400_cov_1.876712_g39911_i0reverse_frame_3 - 0.1 12.3 1.3 0.17 11.7 1.3 1.3 1 0 0 1 1 1 0 Lipoprotein Rz1 precursor DUF543 PF04418.12 NODE_47765_length_400_cov_2.043836_g39909_i0reverse_frame_3 - 0.096 12.7 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF543) Hexapep PF00132.24 NODE_47752_length_400_cov_3.265753_g39896_i0reverse_frame_3 - 1.1e-16 59.8 11.1 3.2e-10 39.3 6.3 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 NODE_47752_length_400_cov_3.265753_g39896_i0reverse_frame_3 - 6.6e-11 41.8 12.5 3.4e-08 33.1 4.4 3.3 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Mac PF12464.8 NODE_47752_length_400_cov_3.265753_g39896_i0reverse_frame_3 - 1.3e-05 25.3 0.0 3.6e-05 23.9 0.0 1.7 2 0 0 2 2 2 1 Maltose acetyltransferase Yae1_N PF09811.9 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_3 - 0.00017 21.2 30.4 0.29 10.8 0.9 4.6 3 1 0 3 3 3 1 Essential protein Yae1, N terminal DUF1467 PF07330.12 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_3 - 0.13 12.3 0.3 0.49 10.3 0.0 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1467) Presenilin PF01080.17 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_3 - 0.21 10.3 2.5 0.22 10.3 2.5 1.1 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_3 - 0.56 8.9 12.4 0.65 8.7 12.4 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Yae1_N PF09811.9 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_2 - 0.075 12.8 25.9 0.12 12.1 1.9 4.9 1 1 2 3 3 3 0 Essential protein Yae1, N terminal DUF2201_N PF13203.6 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_2 - 0.4 10.2 5.8 0.41 10.2 5.8 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain ThrE PF06738.12 NODE_47744_length_400_cov_54.057534_g39888_i0forward_frame_3 - 0.16 11.3 0.7 0.19 11.0 0.7 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF4770 PF15994.5 NODE_47738_length_400_cov_74.512329_g39882_i0reverse_frame_3 - 1.6 9.0 9.7 2.2 8.5 9.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) AAA_13 PF13166.6 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.00015 20.6 9.7 0.00017 20.4 9.7 1.0 1 0 0 1 1 1 1 AAA domain MIF4G_like_2 PF09090.11 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.0057 16.2 0.9 0.0065 16.0 0.9 1.1 1 0 0 1 1 1 1 MIF4G like GPS2_interact PF15784.5 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.027 14.9 0.6 0.027 14.9 0.6 2.1 1 1 1 2 2 2 0 G-protein pathway suppressor 2-interacting domain IL5 PF02025.15 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.03 14.6 0.9 0.069 13.4 0.9 1.5 1 0 0 1 1 1 0 Interleukin 5 CPSase_L_D3 PF02787.19 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.04 14.3 1.4 0.05 14.0 1.4 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TMPIT PF07851.13 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.21 10.8 3.9 0.25 10.6 3.9 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF948 PF06103.11 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.3 11.4 1.3 1.2 9.5 1.3 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DivIC PF04977.15 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.89 9.4 7.7 2 8.2 4.6 2.4 1 1 1 2 2 2 0 Septum formation initiator MtrG PF04210.13 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 4.5 7.2 5.0 1.8 8.5 0.2 2.4 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G Ribosomal_L40e PF01020.17 NODE_47732_length_400_cov_98.435616_g39877_i0forward_frame_2 - 2.7e-30 104.0 11.5 3.9e-30 103.5 11.5 1.3 1 0 0 1 1 1 1 Ribosomal L40e family ubiquitin PF00240.23 NODE_47732_length_400_cov_98.435616_g39877_i0forward_frame_2 - 3.6e-10 39.4 0.1 5.6e-10 38.8 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_47732_length_400_cov_98.435616_g39877_i0forward_frame_2 - 0.021 14.7 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like DUF3598 PF12204.8 NODE_47730_length_400_cov_117.290411_g39875_i0reverse_frame_3 - 0.021 14.3 0.5 0.027 14.0 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3598) Rrp44_CSD1 PF17216.3 NODE_47730_length_400_cov_117.290411_g39875_i0reverse_frame_3 - 0.079 12.7 0.1 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 Rrp44-like cold shock domain ABC_tran_CTD PF16326.5 NODE_47729_length_400_cov_139.369863_g39874_i0forward_frame_3 - 2.7e-08 34.0 9.7 2.7e-08 34.0 9.7 1.8 1 1 1 2 2 2 1 ABC transporter C-terminal domain EOS1 PF12326.8 NODE_47726_length_400_cov_207.290411_g39871_i0forward_frame_3 - 0.16 11.9 5.0 0.067 13.1 1.8 1.8 2 0 0 2 2 2 0 N-glycosylation protein DUF4773 PF15998.5 NODE_47726_length_400_cov_207.290411_g39871_i0forward_frame_2 - 0.057 14.0 0.7 0.072 13.6 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4773) DUF3823_C PF18003.1 NODE_47716_length_400_cov_4373.745205_g39861_i0reverse_frame_2 - 0.12 13.1 0.0 0.15 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3823_C) NADHdh_A3 PF14987.6 NODE_47714_length_400_cov_51055.427397_g30537_i16forward_frame_2 - 0.014 15.7 0.0 0.019 15.2 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 Chloroa_b-bind PF00504.21 NODE_47710_length_401_cov_2.046448_g39856_i0reverse_frame_3 - 1.2e-15 58.4 0.0 1.4e-15 58.2 0.0 1.0 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Herpes_LMP2 PF07415.11 NODE_47709_length_401_cov_2.114754_g39855_i0reverse_frame_2 - 0.062 12.1 2.0 0.077 11.8 2.0 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein GST_N_3 PF13417.6 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 1.3e-08 35.1 0.0 2e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 1.9e-05 24.9 0.0 2.9e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 0.0002 21.6 0.0 0.00028 21.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Tom37 PF10568.9 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 0.0033 17.7 0.0 0.0039 17.5 0.0 1.1 1 0 0 1 1 1 1 Outer mitochondrial membrane transport complex protein GST_N_4 PF17172.4 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 0.044 14.5 0.0 0.055 14.2 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain Med25 PF11232.8 NODE_47700_length_401_cov_2.467213_g39846_i0forward_frame_3 - 0.12 12.4 3.0 0.14 12.1 3.0 1.1 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 Ku PF02735.16 NODE_47698_length_401_cov_2.931694_g39844_i0forward_frame_2 - 2.9e-10 40.2 2.1 5.5e-10 39.3 0.6 1.8 1 1 1 2 2 2 1 Ku70/Ku80 beta-barrel domain DUF4065 PF13274.6 NODE_47691_length_401_cov_6.237705_g39837_i0reverse_frame_2 - 0.19 12.6 3.5 0.33 11.8 3.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) MCC-bdg_PDZ PF10506.9 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.022 14.8 0.3 0.04 13.9 0.3 1.4 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF1664 PF07889.12 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.088 12.8 3.4 0.13 12.3 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.12 12.9 8.0 0.14 12.6 8.0 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region AKNA PF12443.8 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.38 11.4 6.0 0.36 11.5 4.3 1.8 1 1 1 2 2 2 0 AT-hook-containing transcription factor V_ATPase_I PF01496.19 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.59 8.0 9.2 0.64 7.9 9.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family XhlA PF10779.9 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.78 10.0 8.3 0.21 11.8 4.8 1.9 1 1 2 3 3 3 0 Haemolysin XhlA DUF4337 PF14235.6 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 2.2 8.4 7.2 2.8 8.0 7.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) RD3 PF14473.6 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_2 - 0.0032 17.3 0.3 0.0041 16.9 0.3 1.1 1 0 0 1 1 1 1 RD3 protein zf-RRPl_C4 PF17026.5 NODE_47688_length_401_cov_64.267760_g39834_i0forward_frame_3 - 0.055 13.6 0.3 0.073 13.2 0.3 1.2 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type SRP_SPB PF02978.19 NODE_47687_length_401_cov_67.202186_g39833_i0reverse_frame_3 - 0.6 10.8 6.8 0.84 10.3 6.3 1.5 1 1 0 1 1 1 0 Signal peptide binding domain DUF434 PF04256.12 NODE_47687_length_401_cov_67.202186_g39833_i0reverse_frame_2 - 0.01 15.5 0.1 0.018 14.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF434) DUF1844 PF08899.11 NODE_47686_length_401_cov_68.415301_g39832_i0reverse_frame_3 - 0.092 13.1 0.0 5.2 7.4 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1844) Enterotoxin_ST PF02048.16 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_3 - 1 9.9 7.4 4.3 7.9 2.2 2.4 2 0 0 2 2 2 0 Heat-stable enterotoxin ST FXMR_C2 PF16098.5 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_2 - 0.04 14.4 0.0 0.059 13.9 0.0 1.2 1 0 0 1 1 1 0 Fragile X-related mental retardation protein C-terminal region 2 NAD_binding_1 PF00175.21 NODE_47683_length_401_cov_72.131148_g39829_i0forward_frame_3 - 7.9e-10 39.4 0.0 1e-09 39.0 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain WH2 PF02205.20 NODE_47681_length_401_cov_74.008197_g39827_i0reverse_frame_2 - 0.16 11.8 2.7 0.28 11.1 2.7 1.4 1 0 0 1 1 1 0 WH2 motif Trypan_PARP PF05887.11 NODE_47680_length_401_cov_74.199454_g39826_i0reverse_frame_2 - 0.34 10.9 5.4 0.43 10.6 5.4 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF4666 PF15697.5 NODE_47680_length_401_cov_74.199454_g39826_i0reverse_frame_2 - 5.6 7.7 10.5 1 10.0 6.0 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4666) SPC25 PF06703.11 NODE_47679_length_401_cov_75.961749_g39825_i0forward_frame_2 - 0.036 13.9 2.8 0.044 13.6 2.8 1.2 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF4834 PF16118.5 NODE_47679_length_401_cov_75.961749_g39825_i0forward_frame_2 - 0.45 11.5 6.4 0.78 10.7 6.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) 7TM_GPCR_Srx PF10328.9 NODE_47674_length_401_cov_85.404372_g39820_i0forward_frame_3 - 0.0091 15.7 6.1 0.011 15.4 6.1 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srx RseC_MucC PF04246.12 NODE_47674_length_401_cov_85.404372_g39820_i0forward_frame_3 - 0.014 15.3 0.3 0.019 14.9 0.3 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Sdh_cyt PF01127.22 NODE_47674_length_401_cov_85.404372_g39820_i0forward_frame_3 - 0.045 13.8 0.6 0.057 13.5 0.6 1.2 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YWFCY PF14293.6 NODE_47674_length_401_cov_85.404372_g39820_i0forward_frame_3 - 0.21 11.9 2.9 0.17 12.3 1.3 1.7 1 1 0 1 1 1 0 YWFCY protein DUF775 PF05603.12 NODE_47674_length_401_cov_85.404372_g39820_i0forward_frame_2 - 1.1e-13 51.2 0.3 1.2e-13 51.0 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF775) DUF4535 PF15054.6 NODE_47668_length_401_cov_92.655738_g39814_i0reverse_frame_2 - 0.0026 17.5 0.6 0.0087 15.8 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4535) Mit_KHE1 PF10173.9 NODE_47668_length_401_cov_92.655738_g39814_i0reverse_frame_2 - 4.8 7.2 8.1 3.2e+02 1.3 8.1 2.0 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related RVT_connect PF06815.13 NODE_47666_length_401_cov_103.959016_g39812_i0reverse_frame_3 - 1.3 9.3 6.3 9.2 6.6 0.3 2.3 2 0 0 2 2 2 0 Reverse transcriptase connection domain RCC1_2 PF13540.6 NODE_47666_length_401_cov_103.959016_g39812_i0reverse_frame_2 - 5.2e-19 67.5 16.1 9.2e-09 34.9 0.4 3.1 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF4333 PF14230.6 NODE_47666_length_401_cov_103.959016_g39812_i0reverse_frame_2 - 0.0012 19.0 0.6 1.1 9.6 0.0 3.1 3 0 0 3 3 3 1 Domain of unknown function (DUF4333) RCC1 PF00415.18 NODE_47666_length_401_cov_103.959016_g39812_i0reverse_frame_2 - 0.019 15.6 11.3 3.4 8.4 0.0 4.3 3 1 1 4 4 4 0 Regulator of chromosome condensation (RCC1) repeat Kelch_5 PF13854.6 NODE_47666_length_401_cov_103.959016_g39812_i0reverse_frame_2 - 0.082 12.9 2.3 1.8 8.6 0.2 2.8 3 0 0 3 3 3 0 Kelch motif zinc_ribbon_9 PF14369.6 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 3.4e-05 24.0 2.8 1.4 9.3 0.0 3.6 3 1 0 3 3 3 2 zinc-ribbon Zn-ribbon_8 PF09723.10 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 0.007 16.5 5.6 2 8.6 0.2 3.4 2 1 1 3 3 3 2 Zinc ribbon domain DUF4428 PF14471.6 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 0.01 15.7 2.3 0.16 11.9 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) Ribosomal_L32p PF01783.23 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 0.032 14.5 10.1 0.46 10.8 0.3 2.7 2 1 1 3 3 3 0 Ribosomal L32p protein family Herpes_glycoH_C PF17488.2 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 0.035 13.9 4.7 0.57 10.0 0.3 2.1 1 1 1 2 2 2 0 Herpesvirus glycoprotein H C-terminal domain Coronavirus_5 PF05528.11 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 0.071 13.1 5.7 2.4 8.2 0.1 3.0 1 1 2 3 3 3 0 Coronavirus gene 5 protein Stc1 PF12898.7 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 0.27 11.8 12.7 0.41 11.2 4.2 2.4 1 1 2 3 3 3 0 Stc1 domain zf-RING_7 PF02591.15 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 0.29 11.3 6.0 1.7 8.9 0.0 2.9 3 0 0 3 3 3 0 C4-type zinc ribbon domain zinc-ribbons_6 PF07191.12 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 0.81 9.7 12.6 0.99 9.4 2.8 2.7 1 1 1 2 2 2 0 zinc-ribbons PhnA_Zn_Ribbon PF08274.12 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 1.6 8.7 8.3 2.9 7.9 0.1 3.1 4 0 0 4 4 4 0 PhnA Zinc-Ribbon DUF1272 PF06906.11 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 1.7 8.8 10.3 13 5.9 3.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1272) DZR PF12773.7 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 2.3 8.3 11.7 4.5e+02 1.0 11.7 2.5 1 1 0 1 1 1 0 Double zinc ribbon DUF678 PF05077.12 NODE_47666_length_401_cov_103.959016_g39812_i0forward_frame_2 - 3.5 7.8 10.0 3.2 8.0 3.9 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF678) PCIF1_WW PF12237.8 NODE_47663_length_401_cov_122.002732_g39809_i0forward_frame_2 - 2.4e-08 33.8 0.1 4.7e-08 32.9 0.0 1.5 2 0 0 2 2 2 1 Phosphorylated CTD interacting factor 1 WW domain AAA_6 PF12774.7 NODE_47662_length_401_cov_129.786885_g39808_i0reverse_frame_2 - 8e-44 149.9 0.0 9.4e-44 149.7 0.0 1.0 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region LicD PF04991.13 NODE_47660_length_401_cov_132.030055_g39806_i0reverse_frame_2 - 0.41 10.8 11.2 0.53 10.4 11.2 1.1 1 0 0 1 1 1 0 LicD family CDC45 PF02724.14 NODE_47660_length_401_cov_132.030055_g39806_i0reverse_frame_2 - 3.4 5.9 15.3 3.9 5.6 15.3 1.0 1 0 0 1 1 1 0 CDC45-like protein Myco_arth_vir_N PF09610.10 NODE_47655_length_401_cov_168.773224_g39801_i0reverse_frame_2 - 0.12 12.5 2.1 0.18 11.9 2.1 1.2 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) SpoIIP PF07454.11 NODE_47655_length_401_cov_168.773224_g39801_i0reverse_frame_2 - 1.1 8.7 7.2 1.4 8.3 7.2 1.1 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) TaqI_C PF12950.7 NODE_47648_length_401_cov_1365.808743_g39794_i0forward_frame_3 - 0.023 14.8 0.3 0.037 14.1 0.3 1.4 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain tRNA_anti-like PF12869.7 NODE_47647_length_402_cov_1.193460_g39793_i0reverse_frame_3 - 0.048 13.3 0.2 0.062 12.9 0.2 1.1 1 0 0 1 1 1 0 tRNA_anti-like Mistic PF11458.8 NODE_47643_length_402_cov_1.651226_g39789_i0forward_frame_2 - 0.083 12.9 1.4 0.12 12.3 1.4 1.2 1 0 0 1 1 1 0 Membrane-integrating protein Mistic DUF1981 PF09324.10 NODE_47639_length_402_cov_1.809264_g39785_i0reverse_frame_3 - 0.17 11.8 5.2 0.72 9.7 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1981) DUF2000 PF09391.10 NODE_47636_length_402_cov_1.956403_g39782_i0forward_frame_3 - 0.061 13.2 0.1 0.077 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2000) TPR_MLP1_2 PF07926.12 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.0026 17.8 2.7 0.0034 17.4 2.7 1.2 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein AAA_13 PF13166.6 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.012 14.3 2.0 0.014 14.0 2.0 1.1 1 0 0 1 1 1 0 AAA domain DUF5082 PF16888.5 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.025 14.9 1.1 0.055 13.7 0.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) FAM184 PF15665.5 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.031 14.1 1.5 0.036 13.8 1.5 1.1 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B UDPGT PF00201.18 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.034 12.9 0.1 0.037 12.8 0.1 1.0 1 0 0 1 1 1 0 UDP-glucoronosyl and UDP-glucosyl transferase Phage_GP20 PF06810.11 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.051 13.4 1.3 0.11 12.3 1.3 1.6 1 1 0 1 1 1 0 Phage minor structural protein GP20 DUF2408 PF10303.9 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.12 12.9 1.1 0.18 12.3 1.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) UPF0052 PF01933.18 NODE_47634_length_402_cov_2.043597_g39780_i0forward_frame_2 - 0.0041 16.4 0.7 0.0046 16.2 0.7 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 Bystin PF05291.11 NODE_47634_length_402_cov_2.043597_g39780_i0forward_frame_2 - 0.17 11.1 0.2 0.19 11.0 0.2 1.1 1 0 0 1 1 1 0 Bystin DUF4672 PF15716.5 NODE_47631_length_402_cov_2.564033_g39777_i0reverse_frame_3 - 0.076 12.6 3.8 0.065 12.9 2.9 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4672) Glu_cys_ligase PF04262.14 NODE_47631_length_402_cov_2.564033_g39777_i0forward_frame_3 - 8.4e-21 74.0 0.0 1.1e-20 73.6 0.0 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase Lys PF00062.20 NODE_47630_length_402_cov_2.637602_g39776_i0reverse_frame_3 - 0.13 12.5 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 C-type lysozyme/alpha-lactalbumin family Inp1 PF12634.7 NODE_47627_length_402_cov_2.822888_g39773_i0reverse_frame_3 - 0.18 11.8 0.2 0.23 11.5 0.2 1.3 1 0 0 1 1 1 0 Inheritance of peroxisomes protein 1 MFS_1 PF07690.16 NODE_47627_length_402_cov_2.822888_g39773_i0forward_frame_3 - 1.7e-16 60.1 13.6 2e-16 59.9 13.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_47627_length_402_cov_2.822888_g39773_i0forward_frame_3 - 1.7e-15 56.9 12.4 1.9e-15 56.7 12.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.6 NODE_47627_length_402_cov_2.822888_g39773_i0forward_frame_3 - 0.039 12.5 9.5 0.17 10.4 9.6 1.7 1 1 1 2 2 2 0 MFS/sugar transport protein Cyt_c_ox_IV PF12270.8 NODE_47625_length_402_cov_3.005450_g39771_i0reverse_frame_3 - 0.025 14.7 0.2 0.21 11.7 0.0 2.0 2 0 0 2 2 2 0 Cytochrome c oxidase subunit IV 2Fe-2S_thioredx PF01257.19 NODE_47625_length_402_cov_3.005450_g39771_i0forward_frame_3 - 0.027 14.3 0.0 0.042 13.7 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like [2Fe-2S] ferredoxin Complex1_51K PF01512.17 NODE_47625_length_402_cov_3.005450_g39771_i0forward_frame_2 - 5.2e-15 55.6 0.0 7e-15 55.2 0.0 1.2 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit DUF4597 PF15366.6 NODE_47625_length_402_cov_3.005450_g39771_i0forward_frame_2 - 0.085 12.6 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4597) Presenilin PF01080.17 NODE_47624_length_402_cov_3.049046_g39770_i0reverse_frame_3 - 5.6 5.6 5.5 6.1 5.5 5.5 1.0 1 0 0 1 1 1 0 Presenilin Ipi1_N PF12333.8 NODE_47624_length_402_cov_3.049046_g39770_i0forward_frame_3 - 0.034 14.7 0.1 0.057 14.0 0.1 1.3 1 0 0 1 1 1 0 Rix1 complex component involved in 60S ribosome maturation DUF1266 PF06889.11 NODE_47622_length_402_cov_3.196185_g39768_i0forward_frame_2 - 2.3e-20 73.4 1.0 2.9e-20 73.1 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1266) UPF0524 PF15823.5 NODE_47622_length_402_cov_3.196185_g39768_i0forward_frame_2 - 0.017 14.6 0.0 0.025 14.0 0.0 1.4 1 1 0 1 1 1 0 UPF0524 of C3orf70 DUF1580 PF07618.11 NODE_47621_length_402_cov_3.204360_g39767_i0reverse_frame_3 - 0.05 13.2 0.1 0.1 12.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) TPR_20 PF14561.6 NODE_47619_length_402_cov_3.348774_g39765_i0reverse_frame_3 - 0.031 14.6 0.9 0.19 12.0 0.1 2.4 2 2 1 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_47619_length_402_cov_3.348774_g39765_i0reverse_frame_3 - 0.061 13.0 0.5 0.2 11.4 0.0 2.2 3 0 0 3 3 3 0 TPR repeat zf_C2HC_14 PF18574.1 NODE_47615_length_402_cov_4.626703_g39761_i0reverse_frame_3 - 0.16 11.8 1.0 0.24 11.2 1.0 1.2 1 0 0 1 1 1 0 C2HC Zing finger domain DndE PF08870.11 NODE_47614_length_402_cov_5.049046_g39760_i0reverse_frame_3 - 0.071 13.4 0.1 0.098 12.9 0.1 1.2 1 0 0 1 1 1 0 DNA sulphur modification protein DndE SH3BP5 PF05276.14 NODE_47613_length_402_cov_9.465940_g39759_i0reverse_frame_2 - 0.013 15.3 0.0 0.015 15.1 0.0 1.1 1 0 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) C4 PF01413.19 NODE_47612_length_402_cov_16.722071_g39758_i0reverse_frame_3 - 0.12 12.8 0.1 0.17 12.3 0.1 1.2 1 0 0 1 1 1 0 C-terminal tandem repeated domain in type 4 procollagen zf-H2C2_2 PF13465.6 NODE_47611_length_402_cov_39.226158_g39757_i0reverse_frame_3 - 1.3e-06 28.6 13.1 0.0094 16.3 0.8 3.3 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_47611_length_402_cov_39.226158_g39757_i0reverse_frame_3 - 6e-05 23.3 18.7 0.0027 18.1 1.4 2.8 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_47611_length_402_cov_39.226158_g39757_i0reverse_frame_3 - 0.0053 17.5 15.5 0.099 13.5 3.0 3.1 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 NODE_47611_length_402_cov_39.226158_g39757_i0reverse_frame_3 - 0.02 15.6 1.1 0.032 14.9 1.1 1.4 1 0 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats PyrI_C PF02748.15 NODE_47611_length_402_cov_39.226158_g39757_i0reverse_frame_3 - 0.051 13.5 1.3 1.6 8.7 0.3 2.4 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2H2_2 PF12756.7 NODE_47611_length_402_cov_39.226158_g39757_i0reverse_frame_3 - 0.073 13.4 3.9 0.12 12.8 0.8 2.1 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-BED PF02892.15 NODE_47611_length_402_cov_39.226158_g39757_i0reverse_frame_3 - 0.49 10.5 6.4 1.2 9.2 3.5 2.4 1 1 1 2 2 2 0 BED zinc finger zf-C2H2_6 PF13912.6 NODE_47611_length_402_cov_39.226158_g39757_i0reverse_frame_3 - 0.71 9.9 9.4 11 6.1 0.2 2.6 2 0 0 2 2 2 0 C2H2-type zinc finger DUF5391 PF17369.2 NODE_47610_length_402_cov_46.681199_g39756_i0forward_frame_3 - 0.26 11.3 6.3 0.13 12.3 1.5 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5391) Solute_trans_a PF03619.16 NODE_47607_length_402_cov_59.705722_g39753_i0forward_frame_3 - 1e-05 25.2 0.0 1.3e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Organic solute transporter Ostalpha DUF997 PF06196.12 NODE_47601_length_402_cov_65.850136_g39747_i0forward_frame_2 - 0.029 14.4 0.2 0.029 14.4 0.2 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF997) EDR1 PF14381.6 NODE_47597_length_402_cov_72.822888_g39743_i0reverse_frame_3 - 0.19 11.4 0.1 0.27 10.9 0.1 1.3 1 0 0 1 1 1 0 Ethylene-responsive protein kinase Le-CTR1 DUF2070 PF09843.9 NODE_47596_length_402_cov_77.806540_g39742_i0reverse_frame_3 - 0.57 8.4 9.6 0.64 8.2 9.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ArAE_2_N PF10337.9 NODE_47596_length_402_cov_77.806540_g39742_i0reverse_frame_3 - 4.5 6.2 6.8 6.1 5.8 6.8 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal Med13_C PF06333.12 NODE_47596_length_402_cov_77.806540_g39742_i0forward_frame_3 - 0.23 10.7 3.4 0.25 10.6 3.4 1.0 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain SPC12 PF06645.13 NODE_47581_length_402_cov_176.168937_g39727_i0forward_frame_3 - 1e-19 70.4 0.3 1.4e-19 69.9 0.3 1.2 1 0 0 1 1 1 1 Microsomal signal peptidase 12 kDa subunit (SPC12) CCDC32 PF14989.6 NODE_47578_length_402_cov_245.561308_g39724_i0reverse_frame_2 - 0.2 11.7 1.8 0.31 11.0 1.9 1.3 1 1 0 1 1 1 0 Coiled-coil domain containing 32 APA3_viroporin PF11289.8 NODE_47576_length_402_cov_322.288828_g39722_i0reverse_frame_2 - 0.32 10.5 7.3 0.36 10.3 7.3 1.2 1 1 0 1 1 1 0 Coronavirus accessory protein 3a Silic_transp PF03842.13 NODE_47576_length_402_cov_322.288828_g39722_i0forward_frame_2 - 0.14 10.4 2.8 0.18 10.1 2.8 1.0 1 0 0 1 1 1 0 Silicon transporter PAC4 PF16093.5 NODE_47571_length_402_cov_2742.035422_g37845_i3reverse_frame_3 - 7.2e-08 32.5 0.0 9.9e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 NADHdh_A3 PF14987.6 NODE_47567_length_402_cov_50777.106267_g30537_i15forward_frame_2 - 0.014 15.7 0.0 0.019 15.2 0.0 1.3 1 0 0 1 1 1 0 NADH dehydrogenase 1 alpha subcomplex subunit 3 Ras PF00071.22 ORF99049 - 1.1e-41 142.2 0.9 1.2e-41 142.0 0.9 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF99049 - 4e-24 85.1 0.3 4.8e-24 84.9 0.3 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF99049 - 2.2e-14 53.3 0.4 2.5e-14 53.1 0.4 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF99049 - 8.1e-05 22.7 0.2 0.00011 22.3 0.2 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF99049 - 0.0011 18.9 0.1 0.73 9.7 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 ORF99049 - 0.0037 16.8 0.2 0.004 16.7 0.2 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Beta_helix PF13229.6 ORF99049 - 0.012 15.5 2.0 0.015 15.2 2.0 1.2 1 0 0 1 1 1 0 Right handed beta helix region PRORP PF16953.5 ORF99049 - 0.013 15.0 0.1 0.015 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein-only RNase P DFF-C PF09033.10 ORF99049 - 0.064 13.2 0.0 0.083 12.8 0.0 1.2 1 0 0 1 1 1 0 DNA Fragmentation factor 45kDa, C terminal domain Flavodoxin_3 PF12641.7 ORF98974 - 0.042 13.5 1.4 0.046 13.4 0.6 1.5 1 1 0 1 1 1 0 Flavodoxin domain DUF3761 PF12587.8 ORF98974 - 0.24 11.9 0.3 0.24 11.9 0.3 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3761) T4bSS_IcmS PF12608.8 ORF98974 - 0.42 11.0 2.5 0.5 10.7 1.0 1.7 1 1 0 2 2 2 0 Type IVb secretion, IcmS, effector-recruitment RhoGEF PF00621.20 ORF98139 - 0.00021 21.6 2.3 0.00023 21.5 2.3 1.1 1 0 0 1 1 1 1 RhoGEF domain GIDA_assoc PF13932.6 ORF98139 - 0.036 14.3 0.4 0.043 14.0 0.4 1.1 1 0 0 1 1 1 0 GidA associated domain CdiI_2 PF18593.1 ORF98139 - 0.048 14.3 0.6 0.099 13.3 0.3 1.6 1 1 1 2 2 2 0 CdiI immunity protein SHIPPO-rpt PF07004.12 ORF97565 - 0.00022 22.0 1.9 0.0034 18.2 0.0 2.9 3 0 0 3 3 3 1 Sperm-tail PG-rich repeat RhoGEF PF00621.20 ORF97435 - 0.00021 21.6 2.3 0.00023 21.5 2.3 1.1 1 0 0 1 1 1 1 RhoGEF domain GIDA_assoc PF13932.6 ORF97435 - 0.036 14.3 0.4 0.043 14.0 0.4 1.1 1 0 0 1 1 1 0 GidA associated domain CdiI_2 PF18593.1 ORF97435 - 0.048 14.3 0.6 0.099 13.3 0.3 1.6 1 1 1 2 2 2 0 CdiI immunity protein GST_C PF00043.25 ORF96339 - 2.9e-07 30.6 0.0 5.5e-07 29.7 0.0 1.5 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF96339 - 5.3e-06 26.6 0.0 5.9e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF96339 - 0.00088 19.3 0.0 0.0014 18.6 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain MafB19-deam PF14437.6 ORF94891 - 0.00016 21.4 0.2 0.00027 20.7 0.2 1.2 1 1 0 1 1 1 1 MafB19-like deaminase dCMP_cyt_deam_1 PF00383.23 ORF94891 - 0.025 14.5 0.4 0.04 13.8 0.4 1.4 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region Me-amine-dh_L PF02975.14 ORF94684 - 0.11 12.9 0.5 0.11 12.9 0.5 1.8 2 1 0 2 2 2 0 Methylamine dehydrogenase, L chain YscO PF07321.12 ORF93899 - 0.096 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Type III secretion protein YscO Jacalin PF01419.17 ORF93710 - 0.16 11.9 1.6 0.24 11.3 1.6 1.5 1 0 0 1 1 1 0 Jacalin-like lectin domain AAA_9 PF12781.7 ORF93415 - 0.0078 15.4 0.2 0.0086 15.2 0.2 1.2 1 0 0 1 1 1 1 ATP-binding dynein motor region Aminotran_5 PF00266.19 ORF93073 - 0.00053 19.0 0.0 0.0007 18.6 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V AAA_9 PF12781.7 ORF92796 - 0.0078 15.4 0.2 0.0086 15.2 0.2 1.2 1 0 0 1 1 1 1 ATP-binding dynein motor region Peptidase_C2 PF00648.21 ORF92787 - 1.7e-33 115.9 0.4 1.8e-33 115.8 0.4 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Virul_Fac PF10139.9 ORF9259 - 0.0067 14.7 5.7 0.0083 14.4 5.7 1.0 1 0 0 1 1 1 1 Putative bacterial virulence factor RR_TM4-6 PF06459.12 ORF9259 - 0.49 10.2 9.1 0.57 10.0 9.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 AIF_C PF14721.6 ORF9259 - 9.7 6.6 9.4 89 3.4 9.4 2.1 1 1 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term tRNA_Me_trans PF03054.16 ORF92393 - 1.9e-38 132.2 0.0 2.1e-38 132.0 0.0 1.0 1 0 0 1 1 1 1 tRNA methyl transferase TEA PF01285.18 ORF91305 - 0.032 14.3 0.0 0.054 13.6 0.0 1.3 1 0 0 1 1 1 0 TEA/ATTS domain Patched PF02460.18 ORF91168 - 0.035 12.2 0.0 0.036 12.2 0.0 1.0 1 0 0 1 1 1 0 Patched family CLN3 PF02487.17 ORF90989 - 1.1e-16 60.9 8.1 1.3e-16 60.7 8.1 1.0 1 0 0 1 1 1 1 CLN3 protein VID27_PH PF17747.1 ORF90212 - 0.0035 17.6 0.0 0.006 16.8 0.0 1.4 1 0 0 1 1 1 1 VID27 PH-like domain ATP-synt_C PF00137.21 ORF89643 - 1e-31 109.0 27.2 3.8e-21 75.2 13.2 2.0 2 0 0 2 2 2 2 ATP synthase subunit C GerA PF03323.13 ORF89643 - 2.8 6.3 5.8 9.9 4.5 0.1 2.1 2 0 0 2 2 2 0 Bacillus/Clostridium GerA spore germination protein PrsW-protease PF13367.6 ORF88021 - 0.056 12.9 1.1 3.4 7.1 0.6 2.1 1 1 1 2 2 2 0 PrsW family intramembrane metalloprotease CobW_C PF07683.14 ORF86681 - 8.5e-20 70.5 0.7 3.5e-19 68.5 0.7 1.8 1 1 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain VID27_PH PF17747.1 ORF86673 - 0.0035 17.6 0.0 0.006 16.8 0.0 1.4 1 0 0 1 1 1 1 VID27 PH-like domain Seadorna_Vp10 PF07322.11 ORF85541 - 0.028 13.8 0.4 0.034 13.6 0.4 1.1 1 0 0 1 1 1 0 Seadornavirus Vp10 Crl PF07417.12 ORF85469 - 2.1e-53 179.4 0.1 2.4e-53 179.3 0.1 1.0 1 0 0 1 1 1 1 Sigma factor-binding transcriptional regulator Crl IQ PF00612.27 ORF84690 - 4.5e-05 22.9 14.4 0.001 18.6 3.0 3.9 3 0 0 3 3 3 2 IQ calmodulin-binding motif RhoGEF PF00621.20 ORF84349 - 0.00021 21.6 2.3 0.00023 21.5 2.3 1.1 1 0 0 1 1 1 1 RhoGEF domain GIDA_assoc PF13932.6 ORF84349 - 0.036 14.3 0.4 0.043 14.0 0.4 1.1 1 0 0 1 1 1 0 GidA associated domain CdiI_2 PF18593.1 ORF84349 - 0.048 14.3 0.6 0.099 13.3 0.3 1.6 1 1 1 2 2 2 0 CdiI immunity protein FMN_red PF03358.15 ORF83673 - 5.8e-11 42.4 0.0 7.9e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase PAC3 PF10178.9 ORF82926 - 0.00024 21.2 0.0 0.00042 20.4 0.0 1.4 1 0 0 1 1 1 1 Proteasome assembly chaperone 3 NOA36 PF06524.12 ORF82826 - 0.11 11.8 2.6 0.14 11.5 2.6 1.1 1 0 0 1 1 1 0 NOA36 protein MtN3_slv PF03083.16 ORF82698 - 0.026 14.6 1.5 0.047 13.7 1.5 1.5 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange Lebercilin PF15619.6 ORF81901 - 1.3e-06 28.2 18.0 1.3e-06 28.2 18.0 1.5 1 1 1 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease DHR10 PF18595.1 ORF81901 - 0.0067 16.5 19.8 0.0067 16.5 19.8 1.4 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain Spc7 PF08317.11 ORF81901 - 0.0091 14.9 21.0 0.0096 14.8 21.0 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein MCPsignal PF00015.21 ORF81901 - 0.011 15.5 6.7 0.018 14.9 6.7 1.4 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain LXG PF04740.12 ORF81901 - 0.022 14.4 11.7 0.029 14.1 10.7 1.8 1 1 0 1 1 1 0 LXG domain of WXG superfamily PI3K_P85_iSH2 PF16454.5 ORF81901 - 0.05 13.2 16.7 0.058 13.0 15.5 1.7 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Atg14 PF10186.9 ORF81901 - 0.069 12.2 16.8 0.076 12.1 16.8 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 NPV_P10 PF05531.12 ORF81901 - 0.081 13.4 8.9 0.045 14.2 4.0 2.5 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein HisKA_3 PF07730.13 ORF81901 - 0.1 13.1 0.8 0.1 13.1 0.8 2.2 1 1 2 3 3 3 0 Histidine kinase V_ATPase_I PF01496.19 ORF81901 - 0.11 10.4 14.8 0.13 10.1 14.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Med9 PF07544.13 ORF81901 - 0.16 12.1 13.1 0.086 12.9 10.3 2.0 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 ERM PF00769.19 ORF81901 - 0.2 11.5 21.4 0.014 15.3 15.3 1.9 1 1 1 2 2 2 0 Ezrin/radixin/moesin family Exonuc_VII_L PF02601.15 ORF81901 - 0.29 10.7 11.3 0.31 10.6 11.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fez1 PF06818.15 ORF81901 - 0.32 11.4 20.5 0.4 11.1 20.5 1.1 1 0 0 1 1 1 0 Fez1 Fib_alpha PF08702.10 ORF81901 - 0.43 10.8 19.2 0.21 11.7 12.8 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DASH_Spc34 PF08657.10 ORF81901 - 0.64 9.8 21.5 0.32 10.7 12.4 2.0 1 1 1 2 2 2 0 DASH complex subunit Spc34 Tup_N PF08581.10 ORF81901 - 0.65 10.3 14.5 0.63 10.4 6.7 2.7 1 1 1 2 2 2 0 Tup N-terminal Tam41_Mmp37 PF09139.11 ORF81901 - 0.69 9.3 10.0 0.78 9.1 10.0 1.1 1 0 0 1 1 1 0 Phosphatidate cytidylyltransferase, mitochondrial Tho2 PF11262.8 ORF81901 - 0.73 9.0 15.1 1 8.5 15.0 1.4 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 CorA PF01544.18 ORF81901 - 1.1 8.5 7.4 0.85 8.9 5.4 1.5 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein Prominin PF05478.11 ORF81901 - 1.1 7.1 10.0 1.3 6.9 10.0 1.1 1 0 0 1 1 1 0 Prominin Seryl_tRNA_N PF02403.22 ORF81901 - 1.2 9.4 21.3 0.036 14.3 10.8 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain TMPIT PF07851.13 ORF81901 - 1.4 8.1 14.9 1.6 7.9 14.4 1.3 1 1 0 1 1 1 0 TMPIT-like protein DUF3086 PF11285.8 ORF81901 - 1.5 7.8 11.0 1.7 7.7 11.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) APG6_N PF17675.1 ORF81901 - 1.7 9.2 21.1 2.8 8.5 20.9 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region IFT57 PF10498.9 ORF81901 - 1.9 7.3 20.4 3.2 6.6 20.4 1.4 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 APG17 PF04108.12 ORF81901 - 2 7.4 17.9 5.7 5.9 14.1 1.9 1 1 1 2 2 2 0 Autophagy protein Apg17 Tweety PF04906.13 ORF81901 - 2.7 6.6 6.8 2.6 6.6 6.2 1.3 1 1 0 1 1 1 0 Tweety LMBR1 PF04791.16 ORF81901 - 3.2 6.6 12.5 3.8 6.3 12.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF948 PF06103.11 ORF81901 - 3.2 8.1 6.9 5.3 7.4 5.7 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) eIF3_N PF09440.10 ORF81901 - 3.7 8.0 16.3 3.2 8.2 9.2 2.1 1 1 1 2 2 2 0 eIF3 subunit 6 N terminal domain DUF1664 PF07889.12 ORF81901 - 4.2 7.4 11.9 3.8 7.6 9.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) AAA_13 PF13166.6 ORF81901 - 4.2 5.9 19.0 2.7 6.5 17.2 1.4 1 1 0 1 1 1 0 AAA domain DUF16 PF01519.16 ORF81901 - 4.3 7.9 19.1 1.8e+02 2.6 19.0 2.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 Cauli_DNA-bind PF03310.13 ORF81901 - 6.2 6.9 13.9 4.4 7.4 9.3 2.0 2 0 0 2 2 2 0 Caulimovirus DNA-binding protein EF-hand_1 PF00036.32 ORF81781 - 5.4e-11 41.2 3.3 7.8e-06 25.1 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF81781 - 1.8e-09 37.9 1.1 1.8e-09 37.9 1.1 1.8 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF81781 - 1.9e-08 33.6 1.8 0.00032 20.4 0.0 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF81781 - 2.7e-08 33.5 3.2 3.7e-08 33.1 0.8 2.4 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF81781 - 3.8e-05 23.0 0.2 3.8e-05 23.0 0.2 3.4 4 0 0 4 4 4 1 EF hand EF-hand_9 PF14658.6 ORF81781 - 8.6e-05 22.8 0.5 0.00013 22.2 0.5 1.3 1 0 0 1 1 1 1 EF-hand domain DUF3349 PF11829.8 ORF81781 - 0.0012 19.5 4.1 0.0027 18.4 1.8 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3349) EF-hand_4 PF12763.7 ORF81781 - 0.0028 17.6 6.1 0.018 15.0 0.7 2.1 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF81781 - 0.0029 17.9 1.0 0.0055 17.0 1.0 1.6 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Cnd1_N PF12922.7 ORF81781 - 0.014 15.2 0.1 0.027 14.3 0.1 1.5 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term DUF4795 PF16043.5 ORF81781 - 0.053 13.1 4.9 0.069 12.8 4.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) Phage_TAC_12 PF12363.8 ORF81781 - 0.089 13.2 4.9 0.082 13.3 1.0 2.2 1 1 1 2 2 2 0 Phage tail assembly chaperone protein, TAC DUF3024 PF11225.8 ORF81781 - 0.27 11.5 1.1 8.7 6.7 0.2 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3024) EF-hand_8 PF13833.6 ORF81662 - 0.0051 16.6 0.7 0.0077 16.1 0.7 1.3 1 0 0 1 1 1 1 EF-hand domain pair EspA PF03433.13 ORF81662 - 0.02 14.7 2.4 0.022 14.6 2.4 1.1 1 0 0 1 1 1 0 EspA-like secreted protein EF-hand_7 PF13499.6 ORF81662 - 0.32 11.5 2.9 0.71 10.4 0.1 2.2 1 1 1 2 2 2 0 EF-hand domain pair SurA_N_2 PF13623.6 ORF81662 - 0.49 10.2 4.7 0.97 9.3 4.7 1.6 1 1 0 1 1 1 0 SurA N-terminal domain TPR_2 PF07719.17 ORF81163 - 0.00075 19.4 3.0 0.0045 17.0 0.0 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat DUF883 PF05957.13 ORF81163 - 0.0023 18.5 3.2 0.0034 17.9 3.2 1.5 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF883) Synaptobrevin PF00957.21 ORF81163 - 0.013 15.3 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 Synaptobrevin T2SSF PF00482.23 ORF81163 - 0.019 14.9 0.5 0.033 14.2 0.5 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F TPR_19 PF14559.6 ORF81163 - 0.24 11.9 2.6 5.5 7.6 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat MtN3_slv PF03083.16 ORF80287 - 0.019 15.0 1.2 0.031 14.3 1.2 1.6 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange PAP2 PF01569.21 ORF80287 - 0.045 13.5 2.5 0.072 12.9 2.5 1.5 1 1 0 1 1 1 0 PAP2 superfamily PerC PF06069.11 ORF79353 - 0.018 15.3 0.0 0.027 14.7 0.0 1.2 1 0 0 1 1 1 0 PerC transcriptional activator DUF1120 PF06551.12 ORF78925 - 0.0075 16.4 0.8 0.21 11.8 0.1 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1120) PH_TFIIH PF08567.11 ORF78925 - 0.06 13.7 1.4 5.1 7.5 0.0 2.8 1 1 2 3 3 3 0 TFIIH p62 subunit, N-terminal domain DUF1461 PF07314.11 ORF78469 - 0.66 9.9 2.3 0.71 9.7 1.6 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1461) DASH_Ask1 PF08655.10 ORF77945 - 0.094 12.6 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 DASH complex subunit Ask1 TC1 PF15063.6 ORF7710 - 0.026 14.4 0.0 0.055 13.4 0.0 1.6 1 0 0 1 1 1 0 Thyroid cancer protein 1 Pro_isomerase PF00160.21 ORF76903 - 5.6e-23 82.0 0.0 6.5e-23 81.7 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NKAIN PF05640.14 ORF76866 - 0.00013 21.3 0.3 0.00014 21.2 0.3 1.1 1 0 0 1 1 1 1 Na,K-Atpase Interacting protein Ion_trans PF00520.31 ORF76866 - 0.00014 21.2 8.7 0.00018 20.9 8.7 1.2 1 0 0 1 1 1 1 Ion transport protein Nucleoside_tran PF01733.18 ORF76866 - 0.004 16.6 1.3 0.0048 16.3 1.3 1.1 1 0 0 1 1 1 1 Nucleoside transporter SID-1_RNA_chan PF13965.6 ORF76866 - 0.0054 15.2 2.2 0.0064 15.0 2.2 1.0 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 CSG2 PF16965.5 ORF76866 - 0.026 13.5 0.8 0.03 13.3 0.8 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator DUF4834 PF16118.5 ORF76866 - 0.07 14.1 5.5 0.19 12.7 5.5 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) YMF19 PF02326.15 ORF76866 - 0.097 13.5 3.9 0.26 12.1 3.9 1.8 1 1 0 1 1 1 0 Plant ATP synthase F0 Polysacc_synt PF01943.17 ORF72990 - 5.9e-05 22.6 13.6 6.3e-05 22.5 13.6 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein YqhR PF11085.8 ORF72990 - 0.025 14.5 9.4 0.033 14.1 9.0 1.4 1 1 0 1 1 1 0 Conserved membrane protein YqhR DUF2484 PF10658.9 ORF72990 - 0.073 13.4 3.3 0.15 12.3 3.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2484) MatE PF01554.18 ORF72990 - 0.26 10.9 12.2 0.035 13.7 8.5 1.5 2 0 0 2 2 2 0 MatE DUF4599 PF15371.6 ORF72154 - 0.027 15.0 0.5 3.3 8.3 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4599) WD40 PF00400.32 ORF72031 - 4.7e-08 33.6 9.6 0.00038 21.2 0.1 3.5 2 1 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF72031 - 1.8e-05 24.9 0.0 0.00054 20.2 0.0 2.1 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Frtz PF11768.8 ORF72031 - 0.023 13.0 0.0 0.027 12.8 0.0 1.1 1 0 0 1 1 1 0 WD repeat-containing and planar cell polarity effector protein Fritz eIF2A PF08662.11 ORF72031 - 0.029 14.3 0.1 0.049 13.5 0.1 1.4 1 1 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A PD40 PF07676.12 ORF72031 - 0.045 13.7 0.1 0.88 9.6 0.0 2.5 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat Ge1_WD40 PF16529.5 ORF72031 - 0.071 12.1 0.0 0.23 10.4 0.0 1.7 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein VID27 PF08553.10 ORF72031 - 0.081 12.0 0.0 0.089 11.8 0.0 1.1 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain Hexapep PF00132.24 ORF71072 - 3.7e-09 36.0 5.6 6.4e-08 32.0 0.4 2.2 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF71072 - 2e-05 24.2 12.0 0.00052 19.7 1.8 2.1 1 1 1 2 2 2 2 Hexapeptide repeat of succinyl-transferase Viral_P18 PF04521.13 ORF71072 - 0.078 12.8 0.0 0.095 12.5 0.0 1.3 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein SIX1_SD PF16878.5 ORF70957 - 0.00071 20.1 0.3 0.0032 18.0 0.1 1.9 1 1 1 2 2 2 1 Transcriptional regulator, SIX1, N-terminal SD domain DUF1677 PF07911.13 ORF70957 - 0.058 13.8 0.5 3.3 8.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1677) Vps36-NZF-N PF16988.5 ORF70957 - 0.13 11.7 0.1 0.18 11.2 0.1 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Y_phosphatase PF00102.27 ORF69824 - 1.7e-07 31.1 0.0 1.8e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 ORF69824 - 0.00011 22.3 0.1 0.00013 22.0 0.1 1.4 1 1 0 1 1 1 1 Tyrosine phosphatase family DSPc PF00782.20 ORF69824 - 0.00052 19.8 0.0 0.0017 18.2 0.0 1.7 1 1 1 2 2 2 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 ORF69824 - 0.022 14.9 0.3 0.046 13.8 0.3 1.6 1 1 0 1 1 1 0 Inositol hexakisphosphate HflK_N PF12221.8 ORF69646 - 0.053 13.5 0.0 0.16 12.0 0.0 1.8 1 0 0 1 1 1 0 Bacterial membrane protein N terminal V-SNARE_C PF12352.8 ORF6887 - 3.7e-16 59.1 1.9 6.2e-16 58.4 1.9 1.4 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 ORF6887 - 0.00053 19.8 0.1 0.00089 19.1 0.1 1.4 1 1 0 1 1 1 1 Sec20 SNARE PF05739.19 ORF6887 - 1 9.4 7.9 0.27 11.3 2.6 2.5 2 1 1 3 3 3 0 SNARE domain ADP_ribosyl_GH PF03747.14 ORF68444 - 6e-20 72.2 0.1 7.1e-20 71.9 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase HEPN_SAV_6107 PF18726.1 ORF67980 - 1.2 9.7 6.9 0.96 10.0 0.1 2.2 2 0 0 2 2 2 0 SAV_6107-like HEPN RNase_E_G PF10150.9 ORF66195 - 0.19 11.1 5.6 0.21 10.9 5.6 1.2 1 0 0 1 1 1 0 Ribonuclease E/G family Patched PF02460.18 ORF66195 - 0.61 8.1 5.5 0.7 7.9 5.5 1.0 1 0 0 1 1 1 0 Patched family eIF-4B PF06273.11 ORF66195 - 0.77 8.8 4.2 0.45 9.5 2.6 1.2 1 1 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Mer2 PF09074.10 ORF66195 - 1.9 8.3 9.2 2.4 7.9 9.2 1.1 1 0 0 1 1 1 0 Mer2 DUF349 PF03993.12 ORF66195 - 6.8 7.1 9.9 0.93 9.8 4.2 2.3 2 1 1 3 3 3 0 Domain of Unknown Function (DUF349) TssO PF17561.2 ORF6528 - 0.066 13.3 10.5 0.48 10.5 0.2 2.4 1 1 1 2 2 2 0 Type VI secretion system, TssO LMBR1 PF04791.16 ORF6528 - 3.7 6.3 6.7 3.6 6.4 6.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Isochorismatase PF00857.20 ORF6511 - 8e-32 110.8 0.0 8.6e-32 110.7 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family S4 PF01479.25 ORF64234 - 1.4e-11 43.9 0.0 2.5e-11 43.1 0.0 1.5 1 0 0 1 1 1 1 S4 domain AvrPphF-ORF-2 PF09143.10 ORF61428 - 0.13 12.2 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 AvrPphF-ORF-2 Patched PF02460.18 ORF61177 - 0.035 12.2 0.0 0.036 12.2 0.0 1.0 1 0 0 1 1 1 0 Patched family Herpes_U47 PF05467.11 ORF60797 - 0.62 8.1 2.0 0.95 7.5 2.0 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 Spem1 PF15670.5 ORF59690 - 0.076 12.6 9.2 0.11 12.0 9.2 1.2 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF2195 PF09961.9 ORF59562 - 0.0089 16.0 0.1 0.014 15.3 0.1 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2195) SurA_N_2 PF13623.6 ORF59562 - 0.011 15.6 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 SurA N-terminal domain cNMP_binding PF00027.29 ORF59192 - 1.2e-13 50.9 0.0 1.7e-13 50.4 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain LRAT PF04970.13 ORF58646 - 0.00038 20.8 0.0 0.00053 20.3 0.0 1.3 1 0 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 ORF58646 - 0.0053 16.6 1.5 0.014 15.2 1.5 1.7 1 1 0 1 1 1 1 PPPDE putative peptidase domain TBPIP PF07106.13 ORF58354 - 0.1 12.6 0.0 0.24 11.4 0.0 1.7 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain AAA_9 PF12781.7 ORF58082 - 0.0078 15.4 0.2 0.0086 15.2 0.2 1.2 1 0 0 1 1 1 1 ATP-binding dynein motor region DUF2459 PF09601.10 ORF56970 - 0.13 12.1 0.4 0.17 11.7 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2459) LEAP-2 PF07359.11 ORF56970 - 0.14 12.0 0.4 0.14 12.0 0.4 1.7 2 0 0 2 2 2 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) MtN3_slv PF03083.16 ORF56007 - 0.025 14.6 1.5 0.047 13.7 1.5 1.5 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange FlaF PF07309.11 ORF54854 - 0.011 15.7 0.8 0.017 15.1 0.3 1.6 2 0 0 2 2 2 0 Flagellar protein FlaF Ribosomal_L18A PF01775.17 ORF54552 - 1.3e-29 102.8 5.4 1.3e-29 102.8 5.4 1.6 2 0 0 2 2 2 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A YtfJ_HI0045 PF09695.10 ORF54552 - 0.0012 18.5 0.6 0.0015 18.2 0.6 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (YtfJ_HI0045) DUF2887 PF11103.8 ORF54552 - 0.0095 16.0 0.1 0.011 15.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2887) L31 PF09784.9 ORF54552 - 0.19 12.2 3.5 0.17 12.3 2.8 1.4 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L31 DUF3208 PF11482.8 ORF54460 - 0.14 12.5 0.0 0.42 10.9 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3208) Ank_2 PF12796.7 ORF53999 - 0.00025 21.6 0.0 0.00048 20.6 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF53999 - 0.0022 18.6 0.0 0.0043 17.6 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF53999 - 0.021 15.3 0.0 4.4 8.2 0.0 2.7 2 0 0 2 2 2 0 Ankyrin repeat NDUFA12 PF05071.16 ORF53558 - 0.12 13.2 0.8 0.68 10.8 0.4 2.0 1 1 1 2 2 2 0 NADH ubiquinone oxidoreductase subunit NDUFA12 RdRP_5 PF07925.11 ORF53243 - 0.027 11.9 0.2 0.031 11.7 0.2 1.0 1 0 0 1 1 1 0 Reovirus RNA-dependent RNA polymerase lambda 3 UTP15_C PF09384.10 ORF53243 - 0.039 13.6 2.4 0.059 13.0 2.3 1.4 1 1 0 1 1 1 0 UTP15 C terminal DUF2195 PF09961.9 ORF5115 - 0.14 12.1 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2195) VIT PF08487.10 ORF51 - 2.1e-17 63.4 0.3 2.5e-17 63.1 0.3 1.1 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VIT_2 PF13757.6 ORF51 - 0.017 15.0 0.0 0.26 11.2 0.1 2.1 2 0 0 2 2 2 0 Vault protein inter-alpha-trypsin domain Patched PF02460.18 ORF49410 - 0.035 12.2 0.0 0.036 12.2 0.0 1.0 1 0 0 1 1 1 0 Patched family Methyltransf_16 PF10294.9 ORF4938 - 5.3e-25 88.1 0.0 6.2e-25 87.9 0.0 1.0 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_25 PF13649.6 ORF4938 - 0.00081 20.0 0.0 0.0013 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF4938 - 0.0042 17.8 0.0 0.0061 17.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF4938 - 0.0074 15.9 0.0 0.0092 15.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Sensor_TM1 PF13755.6 ORF4938 - 0.03 14.0 0.0 0.088 12.6 0.0 1.7 2 0 0 2 2 2 0 Sensor N-terminal transmembrane domain Met_10 PF02475.16 ORF4938 - 0.037 13.8 0.0 0.042 13.6 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein PrmA PF06325.13 ORF4938 - 0.24 10.8 0.0 0.27 10.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Opiods_neuropep PF01160.18 ORF49172 - 1.3 9.1 5.0 4 7.6 3.7 2.3 2 1 0 2 2 2 0 Vertebrate endogenous opioids neuropeptide PerC PF06069.11 ORF48654 - 0.018 15.3 0.0 0.027 14.7 0.0 1.2 1 0 0 1 1 1 0 PerC transcriptional activator # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks172.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks172.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks172.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks172.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Put_DNA-bind_N PF06971.13 ORF48534 - 0.021 14.8 0.0 0.036 14.1 0.0 1.4 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus Aldo_ket_red PF00248.21 ORF47629 - 3.1e-08 33.2 0.0 3.7e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Kinesin PF00225.23 ORF47239 - 2.1e-37 128.8 3.8 2.4e-37 128.6 3.8 1.0 1 0 0 1 1 1 1 Kinesin motor domain TA_inhibitor PF17574.2 ORF47239 - 0.0055 16.7 0.6 0.057 13.5 0.0 2.2 2 1 0 2 2 2 1 Inhibitor of toxin/antitoxin system (Gp4.5) FleQ PF06490.11 ORF47239 - 0.039 14.3 0.1 0.22 11.9 0.1 1.9 1 1 0 1 1 1 0 Flagellar regulatory protein FleQ DUF2023 PF09633.10 ORF46605 - 0.13 12.4 0.0 0.44 10.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2023) Herpes_Helicase PF02689.14 ORF46605 - 0.15 10.0 0.0 0.18 9.7 0.0 1.0 1 0 0 1 1 1 0 Helicase Glyco_hydro_4C PF11975.8 ORF45923 - 0.13 12.4 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase C-terminal domain CC PF04942.14 ORF44691 - 0.42 10.8 2.5 11 6.4 0.4 2.5 2 1 0 2 2 2 0 CC domain NikR_C PF08753.11 ORF44541 - 6.6e-28 96.7 6.1 1e-27 96.1 6.1 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 ORF44541 - 1.1e-11 44.2 0.8 1.7e-11 43.6 0.8 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 ORF44541 - 0.014 15.6 0.3 0.019 15.1 0.3 1.3 1 1 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family RHH_3 PF12651.7 ORF44541 - 0.071 13.1 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Ribbon-helix-helix domain RHH_5 PF07878.11 ORF44541 - 0.12 12.2 0.3 0.42 10.5 0.0 2.1 3 0 0 3 3 3 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 VapB_antitoxin PF09957.9 ORF44541 - 0.51 10.3 2.2 1.5 8.8 2.2 1.9 1 1 0 1 1 1 0 Bacterial antitoxin of type II TA system, VapB RhoGEF PF00621.20 ORF44526 - 0.00021 21.6 2.3 0.00023 21.5 2.3 1.1 1 0 0 1 1 1 1 RhoGEF domain GIDA_assoc PF13932.6 ORF44526 - 0.036 14.3 0.4 0.043 14.0 0.4 1.1 1 0 0 1 1 1 0 GidA associated domain CdiI_2 PF18593.1 ORF44526 - 0.048 14.3 0.6 0.099 13.3 0.3 1.6 1 1 1 2 2 2 0 CdiI immunity protein S10_plectin PF03501.15 ORF43992 - 3.1e-34 116.9 0.1 3.7e-34 116.7 0.1 1.1 1 0 0 1 1 1 1 Plectin/S10 domain WTX PF09422.10 ORF43944 - 0.0091 15.1 0.2 0.0097 15.0 0.2 1.0 1 0 0 1 1 1 1 WTX protein TAP42 PF04177.12 ORF43944 - 0.015 14.4 0.1 0.015 14.4 0.1 1.0 1 0 0 1 1 1 0 TAP42-like family DUF2076 PF09849.9 ORF43944 - 0.05 13.6 1.1 0.068 13.2 1.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF4391 PF14335.6 ORF43944 - 0.05 13.3 1.0 0.061 13.0 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) Spc24 PF08286.11 ORF43944 - 0.56 10.5 4.0 0.81 10.0 4.0 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 PI3Ka PF00613.20 ORF42986 - 0.16 11.3 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) VIT PF08487.10 ORF42872 - 2.1e-17 63.4 0.3 2.5e-17 63.1 0.3 1.1 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VIT_2 PF13757.6 ORF42872 - 0.017 15.0 0.0 0.26 11.2 0.1 2.1 2 0 0 2 2 2 0 Vault protein inter-alpha-trypsin domain Virul_Fac PF10139.9 ORF42828 - 0.0067 14.7 5.7 0.0083 14.4 5.7 1.0 1 0 0 1 1 1 1 Putative bacterial virulence factor RR_TM4-6 PF06459.12 ORF42828 - 0.49 10.2 9.1 0.57 10.0 9.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 AIF_C PF14721.6 ORF42828 - 9.7 6.6 9.4 89 3.4 9.4 2.1 1 1 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term SCF PF02404.15 ORF41206 - 0.062 12.6 3.1 0.073 12.4 3.1 1.1 1 0 0 1 1 1 0 Stem cell factor Stevor PF17410.2 ORF41206 - 2.2 7.8 8.2 1.1 8.7 6.0 1.6 1 1 1 2 2 2 0 Subtelomeric Variable Open Reading frame DUF3950 PF13132.6 ORF41206 - 6.3 6.6 5.9 1.2 9.0 1.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3950) P22_AR_N PF10547.9 ORF41018 - 0.047 14.0 0.1 0.069 13.5 0.1 1.3 1 0 0 1 1 1 0 P22_AR N-terminal domain TGT PF01702.18 ORF41018 - 0.064 12.4 0.1 0.073 12.2 0.1 1.2 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase DUF166 PF02593.14 ORF41018 - 0.14 11.7 0.8 0.36 10.3 0.8 1.7 1 1 0 1 1 1 0 Domain of unknown function S_layer_N PF05123.12 ORF39841 - 0.0074 16.2 0.4 0.008 16.1 0.4 1.0 1 0 0 1 1 1 1 S-layer like family, N-terminal region PAC3 PF10178.9 ORF397 - 0.00024 21.2 0.0 0.00042 20.4 0.0 1.4 1 0 0 1 1 1 1 Proteasome assembly chaperone 3 Pkinase PF00069.25 ORF3916 - 9.6e-23 80.9 0.0 1.3e-19 70.6 0.0 2.0 1 1 1 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF3916 - 2.2e-12 46.8 0.1 2.8e-12 46.5 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF3916 - 0.0051 16.2 0.0 0.0071 15.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF3916 - 0.19 10.5 0.0 0.23 10.2 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase DNA_pol_A_exo1 PF01612.20 ORF38526 - 0.00052 19.8 0.0 0.00077 19.2 0.0 1.3 1 0 0 1 1 1 1 3'-5' exonuclease RRM_1 PF00076.22 ORF37741 - 1.6e-09 37.5 0.4 2.3e-09 36.9 0.4 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF37741 - 0.00034 20.4 0.1 0.00049 19.9 0.1 1.2 1 0 0 1 1 1 1 Occluded RNA-recognition motif DIM1 PF02966.16 ORF37741 - 0.1 12.4 0.4 0.16 11.7 0.4 1.2 1 0 0 1 1 1 0 Mitosis protein DIM1 DUF4551 PF15087.6 ORF3737 - 5.6 5.7 8.2 6.6 5.4 8.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) Pex14_N PF04695.13 ORF3737 - 7.1 7.3 10.4 4.7 7.9 8.0 1.7 1 1 1 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region PrsW-protease PF13367.6 ORF36611 - 0.056 12.9 1.1 3.4 7.1 0.6 2.1 1 1 1 2 2 2 0 PrsW family intramembrane metalloprotease IGPD PF00475.18 ORF36424 - 3.2e-19 69.7 1.1 3.7e-19 69.5 1.1 1.0 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase Beach PF02138.18 ORF34647 - 7.6e-16 58.3 0.1 1.2e-15 57.7 0.1 1.3 1 0 0 1 1 1 1 Beige/BEACH domain PH_BEACH PF14844.6 ORF34647 - 0.00073 19.6 0.4 0.0014 18.7 0.4 1.5 1 0 0 1 1 1 1 PH domain associated with Beige/BEACH DnaB_2 PF07261.11 ORF34647 - 0.0071 16.1 0.1 0.028 14.2 0.1 1.9 1 1 0 1 1 1 1 Replication initiation and membrane attachment DUF4685 PF15737.5 ORF33745 - 0.096 13.1 0.0 0.15 12.5 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4685) Seadorna_Vp10 PF07322.11 ORF33127 - 0.028 13.8 0.4 0.034 13.6 0.4 1.1 1 0 0 1 1 1 0 Seadornavirus Vp10 Hydrolase_4 PF12146.8 ORF32397 - 4.1e-06 26.2 0.0 5.3e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF32397 - 6.8e-06 25.9 0.1 7.9e-06 25.7 0.1 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold potato_inhibit PF00280.18 ORF3185 - 0.074 13.7 0.0 0.13 13.0 0.0 1.4 1 0 0 1 1 1 0 Potato inhibitor I family TraS PF10624.9 ORF30600 - 0.06 13.3 0.5 0.078 12.9 0.5 1.2 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS zf-RING_12 PF17976.1 ORF30297 - 0.065 13.5 0.2 0.099 12.9 0.2 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF3209 PF11483.8 ORF29772 - 0.054 13.9 0.5 0.054 13.9 0.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3209) Pro_racemase PF05544.11 ORF29772 - 0.058 12.4 1.3 0.065 12.3 1.3 1.2 1 0 0 1 1 1 0 Proline racemase UPF0172 PF03665.13 ORF29772 - 0.46 10.5 8.8 0.6 10.1 8.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) DUF2333 PF10095.9 ORF29772 - 0.65 9.0 7.2 0.53 9.2 6.2 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2333) Ndc1_Nup PF09531.10 ORF29772 - 6.3 5.4 6.9 7.2 5.2 6.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup RBFA PF02033.18 ORF2970 - 1.7e-33 115.2 0.0 2e-33 115.0 0.0 1.1 1 0 0 1 1 1 1 Ribosome-binding factor A DUF3047 PF11249.8 ORF2970 - 0.038 13.4 0.0 0.052 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3047) Stealth_CR4 PF17103.5 ORF29648 - 0.042 13.7 0.0 0.087 12.7 0.0 1.6 1 0 0 1 1 1 0 Stealth protein CR4, conserved region 4 DENN PF02141.21 ORF28692 - 4e-22 79.1 0.2 4.6e-22 78.9 0.2 1.0 1 0 0 1 1 1 1 DENN (AEX-3) domain Adaptin_N PF01602.20 ORF28405 - 2.9e-15 55.9 0.1 3.2e-15 55.7 0.1 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF28405 - 1.2e-14 54.7 0.1 3.4e-13 50.0 0.0 2.1 2 0 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 ORF28405 - 0.0041 17.3 0.3 3.8 8.0 0.0 2.9 3 0 0 3 3 3 2 HEAT repeat HEAT_2 PF13646.6 ORF28405 - 0.066 13.6 0.1 0.52 10.7 0.1 2.4 1 1 1 2 2 2 0 HEAT repeats DUF2023 PF09633.10 ORF27726 - 0.13 12.4 0.0 0.44 10.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2023) Herpes_Helicase PF02689.14 ORF27726 - 0.15 10.0 0.0 0.18 9.7 0.0 1.0 1 0 0 1 1 1 0 Helicase Peptidase_C2 PF00648.21 ORF27670 - 1.7e-33 115.9 0.4 1.8e-33 115.8 0.4 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease DUF16 PF01519.16 ORF27578 - 0.0043 17.5 5.0 0.0043 17.5 5.0 2.1 1 1 1 2 2 2 1 Protein of unknown function DUF16 UPF0061 PF02696.14 ORF27578 - 0.08 11.7 3.0 0.091 11.5 3.0 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family Spc42p PF11544.8 ORF27578 - 0.34 11.0 13.4 0.12 12.4 2.2 3.0 2 1 1 3 3 3 0 Spindle pole body component Spc42p PIG-P PF08510.12 ORF27578 - 0.35 10.8 0.7 0.58 10.1 0.7 1.5 1 1 0 1 1 1 0 PIG-P DrrA_P4M PF14860.6 ORF27578 - 1 9.2 8.8 0.26 11.2 1.4 2.2 2 0 0 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain Myc_N PF01056.18 ORF27578 - 1.4 8.7 7.3 1.5 8.7 7.3 1.3 1 0 0 1 1 1 0 Myc amino-terminal region Spc7 PF08317.11 ORF27578 - 1.6 7.5 14.7 2.9 6.7 14.7 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein bZIP_1 PF00170.21 ORF27578 - 4.3 7.5 10.0 1.3 9.2 1.1 3.1 2 1 0 3 3 3 0 bZIP transcription factor DUF4446 PF14584.6 ORF27578 - 8.4 6.4 12.4 1.5 8.8 2.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) HemY_N PF07219.13 ORF27450 - 8.4 6.7 7.1 3.8 7.8 0.3 2.6 2 1 1 3 3 3 0 HemY protein N-terminus MerT PF02411.15 ORF27427 - 0.0037 17.3 2.1 0.0068 16.4 2.0 1.5 1 1 1 2 2 2 1 MerT mercuric transport protein PsbH PF00737.20 ORF26715 - 3.9 7.3 8.7 0.18 11.5 1.8 2.2 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein Arena_ncap_C PF17290.2 ORF26395 - 0.043 13.2 0.2 0.066 12.5 0.2 1.3 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain Elf1 PF05129.13 ORF26024 - 0.0016 18.5 0.5 0.0026 17.8 0.5 1.4 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like TFIIS_C PF01096.18 ORF26024 - 0.0027 17.5 6.6 0.071 13.0 1.5 2.5 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) DUF5419 PF17441.2 ORF26024 - 0.069 13.3 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5419) Zn_Tnp_IS1 PF03811.13 ORF26024 - 0.47 10.2 3.0 1.6 8.5 0.3 2.2 2 0 0 2 2 2 0 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF26024 - 0.48 10.4 4.3 4.9 7.2 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF26024 - 1.9 8.5 6.3 4.9 7.2 6.3 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain ShK PF01549.24 ORF2514 - 1.4e-08 35.1 4.3 4.2e-08 33.6 4.3 1.8 1 0 0 1 1 1 1 ShK domain-like TssO PF17561.2 ORF23174 - 0.066 13.3 10.5 0.48 10.5 0.2 2.4 1 1 1 2 2 2 0 Type VI secretion system, TssO LMBR1 PF04791.16 ORF23174 - 3.7 6.3 6.7 3.6 6.4 6.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Gar1 PF04410.14 ORF22904 - 5.4e-12 45.7 0.2 6.7e-12 45.5 0.2 1.2 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region Glyco_hydro_38N PF01074.22 ORF22664 - 1.9e-27 96.4 0.2 2.2e-27 96.2 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain DUF4116 PF13475.6 ORF2181 - 1.9e-21 75.5 0.0 1.1e-10 41.0 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4116) SH3_15 PF18346.1 ORF21794 - 0.00043 20.5 1.1 0.00074 19.8 1.1 1.4 1 0 0 1 1 1 1 Mind bomb SH3 repeat domain KOW PF00467.29 ORF21794 - 0.036 14.0 2.6 0.099 12.6 0.5 2.2 2 0 0 2 2 2 0 KOW motif Opiods_neuropep PF01160.18 ORF21600 - 1.3 9.1 5.0 4 7.6 3.7 2.3 2 1 0 2 2 2 0 Vertebrate endogenous opioids neuropeptide Brr6_like_C_C PF10104.9 ORF20825 - 0.2 11.5 0.1 0.26 11.1 0.1 1.1 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain MEDS PF14417.6 ORF19684 - 0.11 12.3 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain Ion_trans_N PF08412.10 ORF19684 - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Ion transport protein N-terminal PAC4 PF16093.5 ORF19519 - 3.6e-12 46.3 0.0 5e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 PRY PF13765.6 ORF19519 - 0.12 12.0 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 SPRY-associated domain ubiquitin PF00240.23 ORF18793 - 2.2e-33 113.8 0.9 3.1e-33 113.3 0.9 1.2 1 0 0 1 1 1 1 Ubiquitin family Ribosomal_L40e PF01020.17 ORF18793 - 4.5e-26 90.5 12.0 6.9e-26 89.9 12.0 1.3 1 0 0 1 1 1 1 Ribosomal L40e family Rad60-SLD PF11976.8 ORF18793 - 9.6e-16 57.4 1.4 1.4e-15 56.9 1.4 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF18793 - 3e-05 24.4 0.2 0.00011 22.5 0.2 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF18793 - 0.0038 17.1 0.1 0.0051 16.7 0.1 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF18793 - 0.007 16.5 0.0 0.015 15.4 0.0 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF18793 - 0.0071 16.4 1.3 1.7 8.7 0.2 2.2 2 0 0 2 2 2 2 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF18793 - 0.0081 16.5 0.1 0.014 15.7 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF18793 - 0.018 15.6 0.1 0.018 15.6 0.1 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF2870 PF11069.8 ORF18793 - 0.071 13.5 0.0 0.16 12.4 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2870) zinc_ribbon_2 PF13240.6 ORF18793 - 1.4 8.7 4.9 0.89 9.4 0.3 2.8 3 0 0 3 3 3 0 zinc-ribbon domain Lactamase_B PF00753.27 ORF18518 - 0.0086 16.1 0.3 0.017 15.2 0.3 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RBM1CTR PF08081.11 ORF18518 - 0.064 13.3 0.5 0.14 12.2 0.5 1.6 1 0 0 1 1 1 0 RBM1CTR (NUC064) family DUF473 PF04322.12 ORF18379 - 0.12 12.2 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF473) zf-C2H2_4 PF13894.6 ORF16994 - 4.8e-06 27.0 7.0 0.0058 17.4 2.8 2.7 2 0 0 2 2 2 2 C2H2-type zinc finger zf-met PF12874.7 ORF16994 - 0.019 15.3 1.1 6.1 7.4 0.9 2.7 2 0 0 2 2 2 0 Zinc-finger of C2H2 type C1_4 PF07975.12 ORF16994 - 0.021 15.1 3.1 0.042 14.1 3.0 1.6 1 1 0 1 1 1 0 TFIIH C1-like domain zf-C2H2_12 PF18658.1 ORF16994 - 0.046 13.3 1.4 0.081 12.5 1.4 1.4 1 0 0 1 1 1 0 Zinc-finger C2H2-type zf_UBZ PF18439.1 ORF16994 - 0.096 12.3 0.7 0.096 12.3 0.7 2.8 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-H2C2_2 PF13465.6 ORF16994 - 0.11 13.0 5.1 0.54 10.8 2.2 2.7 2 0 0 2 2 2 0 Zinc-finger double domain zf-HIT PF04438.16 ORF16994 - 0.25 11.3 4.6 0.76 9.7 1.4 2.5 2 0 0 2 2 2 0 HIT zinc finger zf-C2H2_2 PF12756.7 ORF16994 - 0.25 11.7 7.0 4.2 7.8 4.3 2.1 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 ORF16994 - 0.6 10.5 4.4 7.9 6.9 0.0 2.4 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 ORF16994 - 2.5 8.7 12.3 20 5.9 8.0 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn-ribbon_8 PF09723.10 ORF16994 - 2.6 8.2 7.8 0.67 10.1 3.9 2.0 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF16994 - 7.2 6.7 10.1 1.8 8.7 4.9 2.4 1 1 1 2 2 2 0 C2H2-type zinc finger adh_short_C2 PF13561.6 ORF16438 - 3e-17 63.0 0.0 5.9e-17 62.0 0.0 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF16438 - 8.6e-16 58.0 0.0 1e-15 57.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase DUF4875 PF16175.5 ORF15616 - 0.1 12.8 0.0 0.19 11.9 0.0 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4875) Cation_ATPase PF13246.6 ORF11880 - 3.2e-09 36.7 0.0 4.2e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Cation transport ATPase (P-type) MSV199 PF10553.9 ORF11880 - 0.035 14.3 0.4 0.05 13.8 0.4 1.3 1 1 0 1 1 1 0 MSV199 domain SATase_N PF06426.14 ORF11880 - 0.15 12.4 0.0 0.3 11.5 0.0 1.4 1 0 0 1 1 1 0 Serine acetyltransferase, N-terminal Glyco_hydro_59 PF02057.15 ORF11744 - 0.015 14.5 0.6 0.015 14.5 0.6 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 DUF3203 PF11462.8 ORF11744 - 0.089 13.0 0.2 11 6.2 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3203) TPR_2 PF07719.17 ORF111722 - 0.00075 19.4 3.0 0.0045 17.0 0.0 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat DUF883 PF05957.13 ORF111722 - 0.0023 18.5 3.2 0.0034 17.9 3.2 1.5 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF883) Synaptobrevin PF00957.21 ORF111722 - 0.013 15.3 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 Synaptobrevin T2SSF PF00482.23 ORF111722 - 0.019 14.9 0.5 0.033 14.2 0.5 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F TPR_19 PF14559.6 ORF111722 - 0.24 11.9 2.6 5.5 7.6 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Methyltransf_16 PF10294.9 ORF11046 - 3.1e-09 36.8 0.0 4e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase DUF4090 PF13319.6 ORF109111 - 0.039 14.2 0.2 0.079 13.2 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4090) Ammonium_transp PF00909.21 ORF10794 - 5.4e-08 31.9 0.0 6.7e-08 31.6 0.0 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DHHC PF01529.20 ORF106165 - 0.13 12.4 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase CytB6-F_Fe-S PF08802.10 ORF106165 - 0.22 11.6 1.4 0.44 10.6 1.4 1.5 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit PEP-CTERM PF07589.11 ORF106165 - 7.7 6.8 8.1 11 6.2 2.2 2.6 2 0 0 2 2 2 0 PEP-CTERM motif Pkinase PF00069.25 ORF10549 - 5.3e-38 130.9 0.0 5.8e-38 130.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF10549 - 8.1e-20 71.2 0.0 8.4e-20 71.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF10549 - 3.1e-08 32.8 0.0 3.3e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF10549 - 1.8e-05 24.2 0.0 3.3e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF10549 - 4.9e-05 22.8 0.0 6.1e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF10549 - 0.017 15.0 0.0 0.024 14.6 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF10549 - 0.022 14.3 0.2 0.031 13.9 0.2 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase EcKinase PF02958.20 ORF10549 - 0.066 12.5 0.0 0.092 12.0 0.0 1.1 1 0 0 1 1 1 0 Ecdysteroid kinase Anticodon_1 PF08264.13 ORF104736 - 0.0017 18.3 0.0 0.0018 18.3 0.0 1.1 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA CFTR_R PF14396.6 ORF104310 - 0.2 11.2 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 Cystic fibrosis TM conductance regulator (CFTR), regulator domain Ank_2 PF12796.7 ORF103918 - 4.6e-07 30.3 0.1 5.9e-07 30.0 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF103918 - 4.6e-06 27.1 0.0 0.0059 17.2 0.0 2.6 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF103918 - 0.00013 22.1 0.1 0.28 11.9 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF103918 - 0.0016 18.7 0.0 0.0073 16.6 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (many copies) SecY PF00344.20 ORF103918 - 0.067 12.4 0.0 0.073 12.3 0.0 1.1 1 0 0 1 1 1 0 SecY translocase EST1_DNA_bind PF10373.9 ORF10312 - 0.024 14.1 0.1 0.035 13.6 0.1 1.2 1 0 0 1 1 1 0 Est1 DNA/RNA binding domain RIH_assoc PF08454.11 ORF10312 - 0.13 12.1 1.1 0.17 11.7 1.1 1.2 1 0 0 1 1 1 0 RyR and IP3R Homology associated GCV_H PF01597.19 ORF102116 - 4.9e-05 23.2 0.0 6.5e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Glycine cleavage H-protein Fer2_3 PF13085.6 ORF102116 - 0.19 11.7 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Fucose_iso_C PF02952.17 ORF101963 - 0.026 14.2 0.1 0.031 14.0 0.1 1.2 1 0 0 1 1 1 0 L-fucose isomerase, C-terminal domain DUF4050 PF13259.6 ORF101933 - 0.17 12.2 3.9 0.23 11.8 3.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4050) O-antigen_lig PF13425.6 ORF10157 - 3.2 6.4 6.2 4 6.1 6.2 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein ARL2_Bind_BART PF11527.8 ORF100352 - 1.9e-18 66.7 10.8 2.1e-18 66.5 10.8 1.2 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART EF-G-binding_N PF07299.11 ORF100352 - 0.04 14.4 2.1 0.075 13.6 1.9 1.5 1 1 0 1 1 1 0 Elongation factor G-binding protein, N-terminal FliE PF02049.18 ORF100352 - 0.047 13.8 0.9 13 6.0 0.3 2.9 1 1 1 3 3 3 0 Flagellar hook-basal body complex protein FliE DUF4279 PF14106.6 ORF100352 - 0.068 13.4 0.1 0.086 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4279) Cauli_AT PF03233.13 ORF100352 - 0.071 13.0 2.8 0.091 12.7 2.8 1.2 1 0 0 1 1 1 0 Aphid transmission protein PBECR1 PF18809.1 ORF100352 - 0.37 11.5 4.3 2.7 8.7 4.3 2.0 1 1 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1 PRESAN PF09687.10 ORF100352 - 0.77 10.3 7.3 2.4 8.7 5.9 2.2 1 1 1 2 2 2 0 Plasmodium RESA N-terminal YtxH PF12732.7 ORF100352 - 4.7 7.8 6.2 83 3.8 6.2 2.5 1 1 0 1 1 1 0 YtxH-like protein DUF2976 PF11190.8 NODE_48177_length_394_cov_1.526462_g40306_i0reverse_frame_1 - 8.2 6.3 8.1 1.4 8.7 1.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2976) DUF2909 PF11137.8 NODE_48174_length_394_cov_1.746518_g40303_i0forward_frame_1 - 0.12 12.3 0.1 0.19 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2909) Ribosomal_60s PF00428.19 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.019 15.5 13.6 0.028 15.0 13.6 1.3 1 0 0 1 1 1 0 60s Acidic ribosomal protein Bud13 PF09736.9 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.044 14.2 2.5 0.05 14.0 2.5 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor of RES complex DNA_pol3_tau_5 PF12170.8 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.075 13.1 1.5 0.12 12.5 1.5 1.2 1 0 0 1 1 1 0 DNA polymerase III tau subunit V interacting with alpha Gag_p10 PF02337.17 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.15 12.0 0.0 0.29 11.1 0.0 1.5 1 0 0 1 1 1 0 Retroviral GAG p10 protein SR-25 PF10500.9 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.17 11.5 7.3 0.2 11.2 7.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein TraV PF09676.10 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.42 11.6 4.1 0.51 11.3 4.1 1.2 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) TMEM214 PF10151.9 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 8.1 4.8 8.3 10 4.5 8.3 1.1 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator Perm-CXXC PF15629.6 NODE_48171_length_394_cov_2.295265_g40300_i0reverse_frame_1 - 0.081 13.2 1.3 0.18 12.1 1.3 1.5 1 0 0 1 1 1 0 Permuted single zf-CXXC unit CobT PF06213.12 NODE_48165_length_394_cov_2.813370_g40294_i0reverse_frame_1 - 0.072 12.5 0.4 0.099 12.0 0.4 1.3 1 1 0 1 1 1 0 Cobalamin biosynthesis protein CobT Nucleoside_tran PF01733.18 NODE_48164_length_394_cov_2.885794_g40293_i0reverse_frame_1 - 0.0001 21.8 2.8 0.00011 21.7 2.8 1.0 1 0 0 1 1 1 1 Nucleoside transporter Metallophos PF00149.28 NODE_48163_length_394_cov_3.050139_g40292_i0forward_frame_1 - 1.8e-16 61.3 0.1 2.2e-16 61.0 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 NODE_48163_length_394_cov_3.050139_g40292_i0forward_frame_1 - 0.21 12.1 1.6 0.28 11.6 0.2 2.0 2 1 0 2 2 2 0 Serine-threonine protein phosphatase N-terminal domain DeoC PF01791.9 NODE_48160_length_394_cov_3.855153_g40289_i0forward_frame_1 - 1.5e-41 142.6 0.0 1.8e-41 142.3 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase MANEC PF07502.14 NODE_48146_length_394_cov_77.955432_g40275_i0reverse_frame_1 - 0.0063 16.8 0.8 0.0094 16.2 0.8 1.3 1 0 0 1 1 1 1 MANEC domain DUF5453 PF17534.2 NODE_48138_length_394_cov_115.752089_g40267_i0reverse_frame_1 - 2.2 8.2 8.3 2.5 8.0 8.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5453) ECSCR PF15820.5 NODE_48129_length_394_cov_342.272981_g40258_i0reverse_frame_1 - 1.2 9.0 3.5 18 5.3 0.2 2.4 1 1 1 2 2 2 0 Endothelial cell-specific chemotaxis regulator PIN_6 PF17146.4 NODE_48110_length_395_cov_2.538889_g31065_i2forward_frame_1 - 0.053 14.0 0.9 0.13 12.8 0.9 1.6 1 1 0 1 1 1 0 PIN domain of ribonuclease Imm3 PF14425.6 NODE_48110_length_395_cov_2.538889_g31065_i2forward_frame_1 - 0.14 12.2 2.1 0.18 11.8 2.1 1.1 1 0 0 1 1 1 0 Immunity protein Imm3 HOK_GEF PF01848.16 NODE_48108_length_395_cov_3.008333_g40238_i0reverse_frame_1 - 1.3e-16 59.7 0.7 2e-16 59.1 0.7 1.3 1 0 0 1 1 1 1 Hok/gef family TrbC PF04956.13 NODE_48108_length_395_cov_3.008333_g40238_i0reverse_frame_1 - 0.059 13.6 0.1 0.097 12.9 0.1 1.3 1 0 0 1 1 1 0 TrbC/VIRB2 family YmzC PF14157.6 NODE_48104_length_395_cov_11.452778_g40234_i0forward_frame_1 - 0.0077 16.3 0.6 0.012 15.7 0.6 1.2 1 0 0 1 1 1 1 YmzC-like protein DGF-1_5 PF11038.8 NODE_48103_length_395_cov_20.838889_g40233_i0reverse_frame_1 - 0.0035 16.7 2.1 0.0035 16.7 2.1 1.5 1 1 1 2 2 2 1 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 Bse634I PF07832.11 NODE_48103_length_395_cov_20.838889_g40233_i0reverse_frame_1 - 0.22 10.9 1.4 0.27 10.5 1.4 1.1 1 0 0 1 1 1 0 Cfr10I/Bse634I restriction endonuclease Sox_N PF12444.8 NODE_48102_length_395_cov_22.750000_g40232_i0forward_frame_1 - 0.02 16.0 1.0 0.65 11.2 0.1 2.6 2 1 0 2 2 2 0 Sox developmental protein N terminal GCV_T_C PF08669.11 NODE_48094_length_395_cov_59.302778_g40224_i0reverse_frame_1 - 7.5e-08 32.2 0.1 1.1e-07 31.7 0.1 1.2 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain DUF3270 PF11674.8 NODE_48086_length_395_cov_78.222222_g40216_i0reverse_frame_1 - 0.087 13.0 2.3 0.17 12.1 2.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) Mitofilin PF09731.9 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 0.4 9.5 22.4 0.47 9.2 22.4 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Pex24p PF06398.11 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 0.42 9.5 7.7 0.51 9.3 7.7 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Glyco_transf_41 PF13844.6 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 1 7.7 6.6 1.1 7.6 6.6 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 41 MAJIN PF15077.6 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 1.9 8.2 13.1 2.3 8.0 13.1 1.1 1 0 0 1 1 1 0 Membrane-anchored junction protein DUF3807 PF12720.7 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 2.4 8.4 23.5 2.9 8.2 23.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) RR_TM4-6 PF06459.12 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 2.6 7.8 20.9 3 7.6 20.9 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Vfa1 PF08432.10 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 2.7 8.3 23.0 3.6 7.9 23.0 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 RabGAP-TBC PF00566.18 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 3 7.4 10.1 3.8 7.1 10.1 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain DUF4407 PF14362.6 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 3.1 7.1 13.8 3.4 6.9 13.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AAA_11 PF13086.6 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 6.8 6.4 17.9 7.9 6.2 17.9 1.1 1 0 0 1 1 1 0 AAA domain Herpes_glycop PF01528.16 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 7.6 5.3 5.0 8.5 5.1 5.0 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein M OmpH PF03938.14 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 8.9 6.7 27.4 12 6.2 27.4 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF3275 PF11679.8 NODE_48070_length_395_cov_151.580556_g2426_i3reverse_frame_1 - 0.2 11.6 2.3 0.26 11.2 2.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) DUF4440 PF14534.6 NODE_48069_length_395_cov_178.119444_g40200_i0reverse_frame_1 - 0.011 16.2 0.0 0.022 15.1 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4440) SMP PF04927.12 NODE_48069_length_395_cov_178.119444_g40200_i0reverse_frame_1 - 0.025 15.1 1.0 0.041 14.4 1.0 1.3 1 0 0 1 1 1 0 Seed maturation protein Nucleocap_ssRNA PF11128.8 NODE_48069_length_395_cov_178.119444_g40200_i0forward_frame_1 - 0.084 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Plant viral coat protein nucleocapsid CorA PF01544.18 NODE_48063_length_395_cov_257.952778_g40194_i0reverse_frame_1 - 0.14 11.4 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF924 PF06041.11 NODE_48060_length_395_cov_2545.186111_g40049_i1forward_frame_1 - 9.8e-21 74.7 0.3 1.1e-20 74.5 0.3 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) Herpes_teg_N PF04843.12 NODE_48060_length_395_cov_2545.186111_g40049_i1forward_frame_1 - 0.16 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus tegument protein, N-terminal conserved region DUF4560 PF15118.6 NODE_48053_length_396_cov_1.783934_g40188_i0reverse_frame_1 - 0.0014 18.5 3.6 0.037 13.9 0.6 2.5 1 1 1 2 2 2 2 Domain of unknown function (DUF4560) Lipase_3 PF01764.25 NODE_48053_length_396_cov_1.783934_g40188_i0forward_frame_1 - 1.6e-23 83.1 0.0 2.1e-23 82.8 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) Peptidase_S9 PF00326.21 NODE_48053_length_396_cov_1.783934_g40188_i0forward_frame_1 - 0.0027 17.2 0.0 0.003 17.1 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF2974 PF11187.8 NODE_48053_length_396_cov_1.783934_g40188_i0forward_frame_1 - 0.0039 16.8 0.9 0.0057 16.2 0.8 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) PGAP1 PF07819.13 NODE_48053_length_396_cov_1.783934_g40188_i0forward_frame_1 - 0.042 13.6 0.0 0.054 13.2 0.0 1.1 1 0 0 1 1 1 0 PGAP1-like protein Abhydrolase_6 PF12697.7 NODE_48053_length_396_cov_1.783934_g40188_i0forward_frame_1 - 0.071 13.7 0.0 0.071 13.7 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family CLZ PF16526.5 NODE_48052_length_396_cov_1.811634_g40187_i0forward_frame_1 - 1 9.8 5.8 1.5 9.3 0.5 2.5 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels IclR PF01614.18 NODE_48033_length_396_cov_3.174515_g40168_i0reverse_frame_1 - 1.3e-37 128.5 0.0 1.5e-37 128.3 0.0 1.0 1 0 0 1 1 1 1 Bacterial transcriptional regulator SNF PF00209.18 NODE_48031_length_396_cov_3.429363_g40166_i0forward_frame_1 - 7.3e-12 44.7 4.7 8.8e-12 44.5 4.7 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family Peptidase_C69 PF03577.15 NODE_48029_length_396_cov_4.404432_g40164_i0forward_frame_1 - 0.011 14.7 0.0 0.012 14.5 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C69 Ion_trans PF00520.31 NODE_48015_length_396_cov_86.282548_g40151_i0reverse_frame_1 - 2.3e-09 36.8 0.4 2.7e-09 36.6 0.4 1.1 1 0 0 1 1 1 1 Ion transport protein DUSP PF06337.12 NODE_48012_length_396_cov_97.240997_g40148_i0forward_frame_1 - 8e-06 26.4 0.1 8.7e-06 26.3 0.1 1.2 1 0 0 1 1 1 1 DUSP domain Fumble PF03630.14 NODE_48008_length_396_cov_130.204986_g40144_i0reverse_frame_1 - 0.0066 15.7 0.2 0.0082 15.3 0.2 1.1 1 0 0 1 1 1 1 Fumble DUF4604 PF15377.6 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 0.057 13.8 21.1 0.068 13.6 21.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) PAP_RNA-bind PF04926.15 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 0.073 12.7 2.0 0.091 12.4 2.0 1.2 1 0 0 1 1 1 0 Poly(A) polymerase predicted RNA binding domain RPN2_C PF18004.1 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 0.11 12.4 16.7 0.13 12.1 16.7 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain SPT6_acidic PF14632.6 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 0.55 10.9 17.5 0.19 12.3 6.1 2.1 2 0 0 2 2 2 0 Acidic N-terminal SPT6 MCM_bind PF09739.9 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 1.7 7.0 3.9 1.8 6.9 3.9 1.0 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor SRP72 PF08492.12 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 3.9 8.0 14.4 3.8 8.0 4.9 2.3 2 0 0 2 2 2 0 SRP72 RNA-binding domain MRI PF15325.6 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 9 7.4 12.5 9.2 7.4 11.1 1.7 1 1 1 2 2 2 0 Modulator of retrovirus infection DUF3810 PF12725.7 NODE_48006_length_396_cov_150.027701_g40142_i0forward_frame_1 - 0.57 9.5 3.2 0.61 9.4 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) TRP PF06011.12 NODE_48006_length_396_cov_150.027701_g40142_i0forward_frame_1 - 6.2 5.4 9.6 7.4 5.2 9.6 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Fip1 PF05182.13 NODE_47999_length_396_cov_187.592798_g40135_i0forward_frame_1 - 1.5e-11 43.6 0.1 2.5e-11 42.9 0.1 1.3 1 0 0 1 1 1 1 Fip1 motif BTD PF09270.10 NODE_47998_length_396_cov_189.476454_g40134_i0reverse_frame_1 - 0.003 17.8 0.8 0.68 10.2 0.3 2.1 1 1 1 2 2 2 2 Beta-trefoil DNA-binding domain MerB PF03243.15 NODE_47980_length_397_cov_1.701657_g40117_i0forward_frame_2 - 0.066 13.4 0.3 0.11 12.7 0.3 1.4 1 0 0 1 1 1 0 Alkylmercury lyase zf-nanos PF05741.13 NODE_47973_length_397_cov_2.129834_g40110_i0forward_frame_2 - 0.082 13.2 0.2 0.14 12.4 0.1 1.6 1 1 0 1 1 1 0 Nanos RNA binding domain DUF5599 PF18141.1 NODE_47971_length_397_cov_2.361878_g40108_i0reverse_frame_2 - 9.8e-11 41.8 0.3 3.4e-09 36.8 0.3 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF5599) Fimbrial PF00419.20 NODE_47969_length_397_cov_2.475138_g40106_i0forward_frame_2 - 0.0021 18.3 0.2 0.0028 17.9 0.2 1.1 1 0 0 1 1 1 1 Fimbrial protein PH_4 PF15404.6 NODE_47968_length_397_cov_2.593923_g40105_i0forward_frame_3 - 0.17 11.6 0.6 0.24 11.2 0.6 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain CytadhesinP1 PF12378.8 NODE_47967_length_397_cov_2.748619_g40104_i0forward_frame_3 - 1 9.6 8.7 0.17 12.1 4.1 2.2 1 1 1 2 2 2 0 Trypsin-sensitive surface-exposed protein TMEM190 PF15431.6 NODE_47964_length_397_cov_3.187845_g40101_i0reverse_frame_2 - 0.09 12.9 0.3 0.14 12.3 0.3 1.3 1 0 0 1 1 1 0 Transmembrane protein 190 RNA_pol_Rpb1_6 PF04992.14 NODE_47958_length_397_cov_3.754144_g40095_i0reverse_frame_3 - 0.048 13.5 0.1 0.11 12.3 0.0 1.6 2 0 0 2 2 2 0 RNA polymerase Rpb1, domain 6 DUF2059 PF09832.9 NODE_47958_length_397_cov_3.754144_g40095_i0reverse_frame_3 - 0.13 12.3 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2059) Ribonuc_red_lgC PF02867.15 NODE_47957_length_397_cov_4.328729_g40094_i0forward_frame_3 - 2.9e-29 102.0 0.0 3.1e-29 101.9 0.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Vitelline_membr PF10542.9 NODE_47954_length_397_cov_5.585635_g40091_i0forward_frame_2 - 2.5 8.1 4.7 1.4 8.9 1.9 2.0 2 0 0 2 2 2 0 Vitelline membrane cysteine-rich region Consortin_C PF15281.6 NODE_47949_length_397_cov_54.676796_g40086_i0forward_frame_3 - 0.095 12.7 0.2 0.16 11.9 0.2 1.4 1 0 0 1 1 1 0 Consortin C-terminus Pox_A12 PF04651.13 NODE_47943_length_397_cov_73.022099_g40080_i0forward_frame_3 - 8.1 6.5 6.2 1.5 8.8 1.8 1.8 2 0 0 2 2 2 0 Poxvirus A12 protein P22_portal PF16510.5 NODE_47938_length_397_cov_86.033149_g40075_i0reverse_frame_3 - 0.013 14.2 0.6 0.6 8.6 0.1 2.0 1 1 1 2 2 2 0 Phage P22-like portal protein TACI-CRD2 PF09305.10 NODE_47935_length_397_cov_95.455801_g40072_i0forward_frame_2 - 0.43 10.6 5.7 0.21 11.6 2.7 2.0 2 0 0 2 2 2 0 TACI, cysteine-rich domain zf_C2HC_14 PF18574.1 NODE_47932_length_397_cov_104.118785_g40069_i0reverse_frame_3 - 0.046 13.5 0.1 0.085 12.7 0.1 1.4 1 0 0 1 1 1 0 C2HC Zing finger domain zf-nanos PF05741.13 NODE_47932_length_397_cov_104.118785_g40069_i0reverse_frame_2 - 1.1 9.6 8.3 8.3 6.7 0.0 3.1 3 0 0 3 3 3 0 Nanos RNA binding domain zf-C2H2_4 PF13894.6 NODE_47932_length_397_cov_104.118785_g40069_i0reverse_frame_2 - 5.1 8.2 17.9 5.7 8.1 1.5 3.9 4 0 0 4 4 4 0 C2H2-type zinc finger BDV_M PF16520.5 NODE_47930_length_397_cov_116.002762_g40067_i0reverse_frame_2 - 0.042 14.2 0.2 0.06 13.7 0.2 1.3 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae Med19 PF10278.9 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.0086 16.0 11.4 0.01 15.8 11.4 1.2 1 0 0 1 1 1 1 Mediator of RNA pol II transcription subunit 19 FliW PF02623.15 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.033 14.1 0.1 0.049 13.6 0.1 1.3 1 0 0 1 1 1 0 FliW protein GAGA_bind PF06217.12 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.55 10.5 7.3 0.63 10.3 7.3 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Vfa1 PF08432.10 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.56 10.5 12.2 0.7 10.2 12.2 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Cytomega_UL84 PF06284.11 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.98 7.8 3.0 0.96 7.8 3.0 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein DUF3328 PF11807.8 NODE_47922_length_397_cov_180.665746_g40059_i0reverse_frame_3 - 0.083 12.7 2.1 0.11 12.3 2.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3328) YMF19 PF02326.15 NODE_47922_length_397_cov_180.665746_g40059_i0reverse_frame_2 - 9.5 7.1 14.1 19 6.2 6.3 2.2 2 0 0 2 2 2 0 Plant ATP synthase F0 DUF3731 PF12531.8 NODE_47922_length_397_cov_180.665746_g40059_i0forward_frame_2 - 0.039 13.8 0.8 0.056 13.2 0.8 1.3 1 0 0 1 1 1 0 DNA-K related protein YebO PF13974.6 NODE_47922_length_397_cov_180.665746_g40059_i0forward_frame_2 - 0.5 10.5 2.6 3.4 7.8 0.3 2.2 2 0 0 2 2 2 0 YebO-like protein zf-XS PF03470.14 NODE_47922_length_397_cov_180.665746_g40059_i0forward_frame_2 - 1.1 9.5 8.9 0.13 12.5 2.2 2.3 2 0 0 2 2 2 0 XS zinc finger domain SRP72 PF08492.12 NODE_47922_length_397_cov_180.665746_g40059_i0forward_frame_2 - 2.5 8.6 19.3 3.2 8.3 3.0 3.0 3 0 0 3 3 3 0 SRP72 RNA-binding domain DUF2207 PF09972.9 NODE_47919_length_397_cov_222.303867_g40056_i0forward_frame_2 - 1.3 7.7 4.4 1.5 7.5 4.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Shisa PF13908.6 NODE_47918_length_397_cov_257.864641_g40055_i0forward_frame_2 - 0.16 12.2 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF5090 PF17009.5 NODE_47918_length_397_cov_257.864641_g40055_i0forward_frame_2 - 0.64 9.9 4.6 0.78 9.7 4.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF924 PF06041.11 NODE_47912_length_397_cov_2531.074586_g40049_i0reverse_frame_3 - 9.9e-21 74.7 0.3 1.1e-20 74.5 0.3 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) Herpes_teg_N PF04843.12 NODE_47912_length_397_cov_2531.074586_g40049_i0reverse_frame_3 - 0.18 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus tegument protein, N-terminal conserved region ApoB100_C PF12491.8 NODE_47909_length_397_cov_5640.524862_g37710_i2forward_frame_2 - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal zf-met PF12874.7 NODE_47905_length_397_cov_15059.364641_g40045_i0forward_frame_2 - 0.37 11.2 2.1 12 6.4 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type PYST-C1 PF09690.10 NODE_47904_length_398_cov_1.633609_g40044_i0reverse_frame_3 - 0.0021 17.8 0.3 0.11 12.3 0.2 2.4 2 0 0 2 2 2 2 Plasmodium yoelii subtelomeric region (PYST-C1) DUF5090 PF17009.5 NODE_47903_length_398_cov_1.713499_g40043_i0reverse_frame_2 - 0.33 10.9 14.1 0.44 10.5 14.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) TMEM214 PF10151.9 NODE_47903_length_398_cov_1.713499_g40043_i0forward_frame_2 - 0.36 9.2 4.0 0.41 9.0 4.0 1.0 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator V_ATPase_I PF01496.19 NODE_47901_length_398_cov_1.820937_g40041_i0reverse_frame_3 - 6e-45 153.5 1.8 6.5e-45 153.4 1.8 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF4734 PF15881.5 NODE_47899_length_398_cov_2.068871_g40039_i0forward_frame_2 - 0.1 12.8 0.8 0.16 12.2 0.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4734) HTH_Bact PF18768.1 NODE_47891_length_398_cov_4.165289_g40031_i0reverse_frame_2 - 0.12 11.9 0.2 0.22 11.1 0.2 1.4 1 0 0 1 1 1 0 Helix-turn-helix bacterial domain EKR PF10371.9 NODE_47891_length_398_cov_4.165289_g40031_i0forward_frame_3 - 0.14 11.9 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function Cep57_CLD_2 PF14197.6 NODE_47887_length_398_cov_5.316804_g40027_i0reverse_frame_2 - 0.02 15.0 2.2 0.02 15.0 2.2 2.3 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 DUF3073 PF11273.8 NODE_47887_length_398_cov_5.316804_g40027_i0reverse_frame_2 - 4.4 8.1 6.1 9.5 7.1 6.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3073) DUF5572 PF17733.1 NODE_47885_length_398_cov_44.223140_g40025_i0forward_frame_3 - 1.6e-12 47.1 0.5 2.5e-12 46.4 0.5 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5572) SKA2 PF16740.5 NODE_47882_length_398_cov_71.831956_g40022_i0reverse_frame_2 - 0.0016 18.2 1.3 0.0019 17.9 0.9 1.4 1 1 0 1 1 1 1 Spindle and kinetochore-associated protein 2 DAD PF02109.16 NODE_47882_length_398_cov_71.831956_g40022_i0forward_frame_2 - 0.028 14.7 1.3 0.028 14.7 1.3 1.5 1 1 0 1 1 1 0 DAD family Pyrid_oxidase_2 PF13883.6 NODE_47880_length_398_cov_74.275482_g40020_i0reverse_frame_3 - 0.14 12.1 0.5 0.22 11.5 0.5 1.3 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase SHR-BD PF06650.12 NODE_47880_length_398_cov_74.275482_g40020_i0forward_frame_3 - 5.9e-05 22.6 0.8 0.0012 18.3 0.8 2.1 1 1 0 1 1 1 1 SHR-binding domain of vacuolar-sorting associated protein 13 FGFR3_TM PF18123.1 NODE_47874_length_398_cov_94.515152_g40014_i0forward_frame_2 - 1.2 8.7 3.4 1.9 8.1 0.2 2.4 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Arf PF00025.21 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 5.7e-39 133.4 0.0 6.5e-39 133.2 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 2.2e-08 33.8 0.0 3.1e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.0022 17.6 0.0 0.0025 17.4 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.0051 16.2 0.0 0.0061 15.9 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Roc PF08477.13 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.0066 16.7 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.055 12.6 0.2 0.097 11.8 0.2 1.4 1 1 0 1 1 1 0 G-protein alpha subunit DctP PF03480.13 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.1 11.9 0.0 0.24 10.7 0.0 1.6 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein, family 7 NACHT PF05729.12 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.11 12.4 0.1 0.17 11.8 0.0 1.4 2 0 0 2 2 2 0 NACHT domain PspC PF04024.12 NODE_47871_length_398_cov_104.796143_g40011_i0forward_frame_2 - 0.2 11.5 0.1 0.32 10.8 0.1 1.3 1 0 0 1 1 1 0 PspC domain hGDE_N PF14699.6 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_3 - 0.0027 17.8 0.7 0.004 17.2 0.7 1.3 1 0 0 1 1 1 1 N-terminal domain from the human glycogen debranching enzyme Longin PF13774.6 NODE_47858_length_398_cov_202.319559_g39998_i0reverse_frame_2 - 0.17 11.9 3.1 0.26 11.4 3.1 1.4 1 0 0 1 1 1 0 Regulated-SNARE-like domain hGDE_N PF14699.6 NODE_47858_length_398_cov_202.319559_g39998_i0forward_frame_3 - 0.0035 17.5 0.9 0.0061 16.7 0.9 1.5 1 0 0 1 1 1 1 N-terminal domain from the human glycogen debranching enzyme CS PF04969.16 NODE_47856_length_398_cov_284.672176_g39996_i0forward_frame_3 - 7.7e-06 26.8 0.0 1.1e-05 26.3 0.0 1.3 1 0 0 1 1 1 1 CS domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks173.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks173.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks173.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks173.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Spec3 PF15795.5 NODE_47850_length_398_cov_661.600551_g37473_i1reverse_frame_2 - 1.5e-13 51.1 2.6 7.4e-06 26.4 0.5 2.4 2 0 0 2 2 2 2 Ectodermal ciliogenesis protein DUF1647 PF07801.11 NODE_47841_length_399_cov_2.112637_g39983_i0reverse_frame_3 - 0.39 10.5 3.3 0.59 9.9 3.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1647) Latrotoxin_C PF15658.6 NODE_47841_length_399_cov_2.112637_g39983_i0reverse_frame_2 - 0.0075 16.0 0.1 0.01 15.6 0.1 1.4 1 1 0 1 1 1 1 Latrotoxin C-terminal domain TM2 PF05154.16 NODE_47838_length_399_cov_2.423077_g39980_i0reverse_frame_3 - 0.014 15.7 1.3 0.032 14.6 1.3 1.6 1 0 0 1 1 1 0 TM2 domain DUF5004 PF16395.5 NODE_47838_length_399_cov_2.423077_g39980_i0forward_frame_3 - 0.029 14.4 0.0 0.037 14.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5004) DUF3927 PF13064.6 NODE_47837_length_399_cov_2.541209_g39979_i0reverse_frame_2 - 0.021 14.8 3.1 0.062 13.3 3.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) EABR PF12180.8 NODE_47833_length_399_cov_2.747253_g39975_i0reverse_frame_2 - 0.21 11.2 0.2 0.35 10.5 0.2 1.3 1 0 0 1 1 1 0 TSG101 and ALIX binding domain of CEP55 DUF2304 PF10066.9 NODE_47828_length_399_cov_3.173077_g39970_i0forward_frame_2 - 0.038 14.2 0.1 0.061 13.5 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) Adenine_glyco PF03352.13 NODE_47823_length_399_cov_4.148352_g39965_i0reverse_frame_3 - 0.011 15.5 0.4 0.012 15.4 0.4 1.1 1 0 0 1 1 1 0 Methyladenine glycosylase DNA_repr_REX1B PF14966.6 NODE_47823_length_399_cov_4.148352_g39965_i0reverse_frame_3 - 0.042 14.5 0.3 0.54 11.0 0.1 2.1 1 1 1 2 2 2 0 DNA repair REX1-B O_Spanin_T7 PF17531.2 NODE_47822_length_399_cov_4.439560_g5271_i5forward_frame_3 - 0.0067 16.4 0.0 0.012 15.6 0.0 1.4 1 0 0 1 1 1 1 outer-membrane spanin sub-unit TMEM189_B_dmain PF10520.9 NODE_47822_length_399_cov_4.439560_g5271_i5forward_frame_3 - 0.15 12.2 0.3 0.19 11.8 0.3 1.1 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain RPN2_C PF18004.1 NODE_47822_length_399_cov_4.439560_g5271_i5forward_frame_2 - 0.67 9.9 11.8 0.87 9.5 11.8 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain Wzy_C PF04932.15 NODE_47821_length_399_cov_4.675824_g39964_i0reverse_frame_3 - 0.23 11.1 6.1 0.31 10.7 6.1 1.2 1 0 0 1 1 1 0 O-Antigen ligase DinB_2 PF12867.7 NODE_47819_length_399_cov_5.271978_g39962_i0forward_frame_2 - 0.045 14.3 0.3 0.063 13.8 0.3 1.4 1 1 0 1 1 1 0 DinB superfamily DUF4164 PF13747.6 NODE_47818_length_399_cov_8.282967_g39961_i0reverse_frame_2 - 0.022 15.0 1.0 0.03 14.6 0.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) DUF4795 PF16043.5 NODE_47818_length_399_cov_8.282967_g39961_i0reverse_frame_2 - 1.2 8.6 9.8 4 7.0 3.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) SUKH-4 PF14435.6 NODE_47817_length_399_cov_33.252747_g39960_i0reverse_frame_2 - 0.061 13.4 0.0 0.072 13.1 0.0 1.2 1 0 0 1 1 1 0 SUKH-4 immunity protein DUF5398 PF17376.2 NODE_47815_length_399_cov_46.079670_g39958_i0reverse_frame_3 - 0.038 14.6 1.3 7.4 7.3 1.3 2.8 2 1 0 2 2 2 0 Family of unknown function (DUF5398) RraB PF06877.11 NODE_47810_length_399_cov_62.750000_g39953_i0reverse_frame_3 - 0.025 15.3 0.0 0.034 14.9 0.0 1.2 1 0 0 1 1 1 0 Regulator of ribonuclease activity B POM121 PF15229.6 NODE_47806_length_399_cov_83.692308_g39949_i0reverse_frame_3 - 0.0026 17.4 3.4 0.0072 16.0 3.4 1.7 1 1 0 1 1 1 1 POM121 family zf-C4 PF00105.18 NODE_47806_length_399_cov_83.692308_g39949_i0forward_frame_2 - 0.26 11.8 1.3 0.28 11.7 0.1 1.6 2 0 0 2 2 2 0 Zinc finger, C4 type (two domains) CPT PF07931.12 NODE_47799_length_399_cov_97.912088_g39942_i0reverse_frame_2 - 0.084 12.7 0.6 0.19 11.6 0.3 1.6 1 1 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein MerR PF00376.23 NODE_47799_length_399_cov_97.912088_g39942_i0forward_frame_3 - 0.08 12.7 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 MerR family regulatory protein RCC1_2 PF13540.6 NODE_47796_length_399_cov_104.296703_g39939_i0reverse_frame_2 - 0.00012 21.8 0.9 0.048 13.5 0.1 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat NDK PF00334.19 NODE_47796_length_399_cov_104.296703_g39939_i0forward_frame_2 - 0.061 13.3 0.2 0.1 12.6 0.0 1.5 2 0 0 2 2 2 0 Nucleoside diphosphate kinase 2OG-FeII_Oxy_5 PF13759.6 NODE_47795_length_399_cov_105.057692_g39938_i0reverse_frame_3 - 4.7e-22 78.3 0.1 9.7e-22 77.3 0.1 1.5 1 1 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy_3 PF13640.6 NODE_47795_length_399_cov_105.057692_g39938_i0reverse_frame_3 - 0.003 18.4 0.1 0.0041 18.0 0.1 1.4 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily PGAP1 PF07819.13 NODE_47795_length_399_cov_105.057692_g39938_i0forward_frame_2 - 0.062 13.0 0.0 0.081 12.6 0.0 1.1 1 0 0 1 1 1 0 PGAP1-like protein FAM176 PF14851.6 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.00043 20.0 1.0 0.00058 19.5 1.0 1.1 1 0 0 1 1 1 1 FAM176 family DUF4834 PF16118.5 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.0092 16.9 2.3 0.012 16.5 2.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) SID-1_RNA_chan PF13965.6 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.016 13.6 1.8 0.019 13.4 1.8 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 OAD_gamma PF04277.13 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.037 14.6 1.4 0.086 13.4 1.4 1.7 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Peptidase_S49_N PF08496.10 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.043 13.9 5.4 0.055 13.5 5.4 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal CLN3 PF02487.17 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.16 11.0 0.7 0.19 10.8 0.7 1.0 1 0 0 1 1 1 0 CLN3 protein Neur_chan_memb PF02932.16 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.17 11.9 2.2 0.21 11.6 2.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Zip PF02535.22 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.23 10.7 0.3 0.26 10.5 0.3 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter O-antigen_lig PF13425.6 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.4 9.4 2.5 0.45 9.2 2.5 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Med19 PF10278.9 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 1.7 8.6 13.6 2.2 8.2 13.6 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 EphA2_TM PF14575.6 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 2.3 9.1 7.6 5.7 7.9 7.6 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain IR1-M PF12185.8 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_2 - 0.035 14.0 0.8 0.065 13.2 0.8 1.5 1 0 0 1 1 1 0 Nup358/RanBP2 E3 ligase domain YMF19 PF02326.15 NODE_47792_length_399_cov_111.936813_g39935_i0forward_frame_3 - 1.7 9.4 9.2 0.41 11.5 2.2 2.2 2 0 0 2 2 2 0 Plant ATP synthase F0 MORN PF02493.20 NODE_47788_length_399_cov_128.939560_g39931_i0forward_frame_3 - 0.35 10.9 4.8 5.9 7.0 0.1 3.6 4 0 0 4 4 4 0 MORN repeat MORN PF02493.20 NODE_47785_length_399_cov_189.032967_g39928_i0forward_frame_3 - 1e-23 81.7 20.4 4.1e-09 35.8 0.4 5.0 5 0 0 5 5 5 4 MORN repeat FERM_f0 PF16511.5 NODE_47785_length_399_cov_189.032967_g39928_i0forward_frame_3 - 0.05 13.9 0.2 0.11 12.8 0.2 1.5 1 0 0 1 1 1 0 N-terminal or F0 domain of Talin-head FERM WD40 PF00400.32 NODE_47780_length_399_cov_363.997253_g39923_i0reverse_frame_3 - 0.0024 18.6 6.0 0.033 15.1 2.4 2.9 3 0 0 3 3 3 2 WD domain, G-beta repeat DUF5479 PF17575.2 NODE_47778_length_399_cov_1050.895604_g38381_i1forward_frame_2 - 0.026 15.1 0.1 0.033 14.7 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5479) DUF4440 PF14534.6 NODE_47774_length_399_cov_7817.585165_g39918_i0reverse_frame_2 - 0.0032 17.9 0.0 0.0046 17.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) Peptidase_M42 PF05343.14 NODE_47774_length_399_cov_7817.585165_g39918_i0forward_frame_3 - 0.056 12.5 0.0 0.085 11.9 0.0 1.2 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase RIB43A PF05914.12 ORF99663 - 5.6e-10 38.5 17.7 8.6e-10 37.9 17.7 1.2 1 0 0 1 1 1 1 RIB43A PepSY_TM_like_2 PF16357.5 ORF99663 - 0.61 10.0 1.8 0.66 9.9 1.8 1.1 1 0 0 1 1 1 0 Putative PepSY_TM-like Gly_acyl_tr_N PF06021.11 ORF99663 - 0.89 9.6 8.4 1.2 9.2 8.4 1.1 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase HSP70 PF00012.20 ORF99663 - 1.5 6.9 11.8 1.6 6.8 11.8 1.0 1 0 0 1 1 1 0 Hsp70 protein MPM1 PF17234.2 ORF99663 - 2.1 8.6 14.7 3.1 8.0 14.7 1.2 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 MS_channel PF00924.18 ORF99101 - 1.8e-28 99.5 0.4 2.1e-28 99.3 0.4 1.0 1 0 0 1 1 1 1 Mechanosensitive ion channel Stc1 PF12898.7 ORF98894 - 9.3e-06 26.1 1.7 1.3e-05 25.6 1.7 1.3 1 0 0 1 1 1 1 Stc1 domain His_Me_b4a2 PF18275.1 ORF98894 - 0.0063 16.6 3.3 0.012 15.7 3.3 1.4 1 0 0 1 1 1 1 His-Me finger endonuclease beta4-alpha2 domain Aminotran_1_2 PF00155.21 ORF98221 - 1.3e-11 44.3 0.0 1.4e-11 44.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Speriolin_C PF15059.6 ORF98221 - 0.0032 17.6 0.0 0.0056 16.8 0.0 1.4 1 0 0 1 1 1 1 Speriolin C-terminus Flg_hook PF02120.16 ORF98221 - 0.017 15.0 0.1 0.037 13.9 0.0 1.5 2 0 0 2 2 2 0 Flagellar hook-length control protein FliK Ribosomal_L36e PF01158.18 ORF97524 - 2.1e-26 92.0 1.9 2.1e-26 92.0 1.9 1.7 1 1 1 2 2 2 1 Ribosomal protein L36e VKOR PF07884.14 ORF96270 - 4.2 7.6 7.9 12 6.1 7.8 1.8 1 1 0 1 1 1 0 Vitamin K epoxide reductase family Waikav_capsid_1 PF12264.8 ORF95921 - 0.083 12.4 1.5 0.081 12.4 0.6 1.4 1 1 0 1 1 1 0 Waikavirus capsid protein 1 DUF3857 PF12969.7 ORF95446 - 0.018 15.1 0.2 0.028 14.5 0.2 1.2 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3857) Ribosomal_S3_C PF00189.20 ORF94817 - 0.003 18.0 0.0 0.0043 17.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain HIT PF01230.23 ORF94734 - 2.9e-22 79.2 0.0 4e-22 78.8 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 ORF94734 - 5.9e-07 30.0 0.0 6.6e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 ORF94734 - 0.0018 18.1 0.0 0.0036 17.2 0.0 1.5 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 HTH_54 PF18607.1 ORF94531 - 0.035 14.2 1.3 0.55 10.3 0.7 2.1 2 0 0 2 2 2 0 ParA helix turn helix domain Phage_1_1 PF08200.11 ORF94531 - 1.9 8.9 5.0 2.7 8.5 0.4 2.7 3 0 0 3 3 3 0 Bacteriophage 1.1 Protein Securin PF04856.13 ORF94182 - 0.00037 20.5 0.1 0.00042 20.4 0.1 1.1 1 0 0 1 1 1 1 Securin sister-chromatid separation inhibitor SnoaL_2 PF12680.7 ORF93638 - 0.0093 16.6 0.0 0.014 16.0 0.0 1.3 1 0 0 1 1 1 1 SnoaL-like domain DUF2358 PF10184.9 ORF93638 - 0.17 12.2 0.0 0.25 11.6 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2358) Pentapeptide_4 PF13599.6 ORF92069 - 0.021 15.0 0.5 0.032 14.4 0.5 1.3 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) LLGL PF08366.13 ORF91309 - 0.0045 17.3 0.1 0.0074 16.6 0.1 1.3 1 0 0 1 1 1 1 LLGL2 Prok-E2_A PF14457.6 ORF90549 - 0.039 13.6 0.0 0.052 13.2 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family A Ribosomal_L34 PF00468.17 ORF90549 - 0.11 12.5 1.4 0.19 11.7 1.4 1.3 1 0 0 1 1 1 0 Ribosomal protein L34 MtrE PF04206.12 ORF89488 - 2.2 7.5 7.6 2.8 7.2 7.6 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit E DUF2457 PF10446.9 ORF8892 - 0.19 10.8 5.0 0.21 10.7 5.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF3589 PF12141.8 ORF88319 - 0.0038 15.9 2.0 0.0039 15.9 2.0 1.0 1 0 0 1 1 1 1 Beta-mannosyltransferases Interferon PF00143.19 ORF87386 - 0.032 14.4 0.7 0.044 14.0 0.7 1.1 1 0 0 1 1 1 0 Interferon alpha/beta domain GOLD_2 PF13897.6 ORF87386 - 0.24 11.9 1.6 0.31 11.5 1.6 1.2 1 0 0 1 1 1 0 Golgi-dynamics membrane-trafficking CENP-B_dimeris PF09026.10 ORF87386 - 0.27 11.6 8.3 0.4 11.1 8.3 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain Nop14 PF04147.12 ORF87386 - 0.28 9.3 7.2 0.27 9.4 7.2 1.0 1 0 0 1 1 1 0 Nop14-like family DUF3857 PF12969.7 ORF86375 - 0.018 15.1 0.2 0.028 14.5 0.2 1.2 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3857) DUF600 PF04634.12 ORF86178 - 0.0023 18.0 0.6 0.0031 17.6 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF600 Med17 PF10156.9 ORF86178 - 0.0064 15.3 4.6 0.0067 15.2 4.6 1.1 1 0 0 1 1 1 1 Subunit 17 of Mediator complex LPD39 PF18858.1 ORF86178 - 0.0088 16.2 6.2 0.011 15.8 6.2 1.1 1 0 0 1 1 1 1 Large polyvalent protein associated domain 39 MutS_II PF05188.17 ORF86178 - 0.017 15.4 0.9 0.019 15.2 0.9 1.2 1 0 0 1 1 1 0 MutS domain II PGK PF00162.19 ORF86178 - 0.38 9.6 1.8 0.45 9.4 1.8 1.0 1 0 0 1 1 1 0 Phosphoglycerate kinase TAXi_N PF14543.6 ORF85504 - 0.034 14.4 2.1 0.035 14.4 2.1 1.2 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal GD_N PF16030.5 ORF85487 - 0.06 13.7 0.3 0.08 13.2 0.3 1.3 1 0 0 1 1 1 0 Serine protease gd N-terminus UPF0147 PF03685.13 ORF85133 - 0.055 13.5 0.5 0.082 13.0 0.5 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) Peptidase_A17 PF05380.13 ORF85133 - 0.13 12.3 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Pao retrotransposon peptidase MORN PF02493.20 ORF84983 - 1.6e-26 90.6 36.4 5.6e-07 29.1 2.7 6.2 6 0 0 6 6 6 6 MORN repeat Phage_lysozyme2 PF18013.1 ORF84983 - 3 7.9 10.3 1.5e+02 2.4 10.3 2.8 1 1 0 1 1 1 0 Phage tail lysozyme Pyr_redox_dim PF02852.22 ORF84938 - 1.7e-15 57.2 0.6 3.1e-15 56.4 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HATPase_c_3 PF13589.6 ORF83617 - 0.059 13.2 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MFS_1 PF07690.16 ORF83434 - 2.8e-05 23.2 11.3 5.5e-05 22.3 11.3 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF83434 - 0.00072 18.5 10.3 0.0018 17.3 0.0 2.0 1 1 1 2 2 2 1 Sugar (and other) transporter Oxidored_q2 PF00420.24 ORF83434 - 8.4 6.1 13.8 9.2 6.0 4.7 2.3 1 1 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MtrE PF04206.12 ORF82223 - 2.2 7.5 7.6 2.8 7.2 7.6 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit E DUF4665 PF15679.5 ORF80550 - 0.056 14.1 3.0 0.075 13.7 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4665) PI3K_1B_p101 PF10486.9 ORF78821 - 0.064 11.0 0.3 0.074 10.8 0.3 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit Toxin_GhoT_OrtT PF10753.9 ORF77557 - 1.1 9.6 4.3 68 3.8 0.1 3.7 4 0 0 4 4 4 0 Toxin GhoT_OrtT His_Phos_1 PF00300.22 ORF76470 - 8.9e-28 97.3 0.0 9.9e-28 97.2 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) HATPase_c PF02518.26 ORF75723 - 5.6e-05 23.6 0.2 0.00015 22.3 0.1 1.6 1 1 1 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Golgin_A5 PF09787.9 ORF73961 - 3.8e-05 23.3 4.6 0.00012 21.7 4.0 1.8 1 1 0 1 1 1 1 Golgin subfamily A member 5 CASP_C PF08172.12 ORF73961 - 0.0078 15.6 1.9 0.013 14.9 0.4 1.8 2 0 0 2 2 2 1 CASP C terminal HOOK PF05622.12 ORF73961 - 0.014 13.6 0.1 0.015 13.5 0.1 1.0 1 0 0 1 1 1 0 HOOK protein Homeodomain PF00046.29 ORF73506 - 5.5e-06 26.1 0.8 5.5e-06 26.1 0.8 1.8 2 0 0 2 2 2 1 Homeodomain HTH_Tnp_1_2 PF13022.6 ORF73506 - 0.014 15.6 0.4 0.024 14.8 0.3 1.4 1 1 0 1 1 1 0 Helix-turn-helix of insertion element transposase Phage_AlpA PF05930.12 ORF73506 - 0.036 13.9 0.2 0.1 12.5 0.0 1.8 2 0 0 2 2 2 0 Prophage CP4-57 regulatory protein (AlpA) HTH_26 PF13443.6 ORF73506 - 0.097 13.1 0.0 0.28 11.7 0.0 1.9 2 1 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Inositol_P PF00459.25 ORF73397 - 7.9e-22 78.0 0.1 8.7e-22 77.9 0.1 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family adh_short_C2 PF13561.6 ORF72880 - 5.9e-09 35.8 0.1 6.7e-09 35.6 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF72880 - 7.5e-05 22.3 0.0 9.9e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase DUF4558 PF15104.6 ORF72693 - 0.043 13.9 1.7 0.065 13.3 1.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4558) GFP PF01353.22 ORF72611 - 0.0066 15.9 0.2 0.0078 15.7 0.2 1.2 1 0 0 1 1 1 1 Green fluorescent protein Phosphoprotein PF00922.17 ORF72611 - 0.076 12.6 0.8 0.09 12.4 0.8 1.1 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein ABC_tran PF00005.27 ORF72501 - 1.2e-07 32.3 0.6 3e-07 31.0 0.0 1.9 2 1 0 2 2 2 1 ABC transporter NB-ARC PF00931.22 ORF72501 - 3.6e-05 23.1 0.1 0.00025 20.3 0.0 1.9 2 0 0 2 2 2 1 NB-ARC domain AAA_22 PF13401.6 ORF72501 - 4.5e-05 23.7 0.0 8.1e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF72501 - 7.1e-05 22.8 0.1 0.0002 21.3 0.0 1.5 1 1 0 2 2 2 1 RsgA GTPase ATPase_2 PF01637.18 ORF72501 - 0.00019 21.4 0.0 0.00033 20.6 0.0 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea T2SSE PF00437.20 ORF72501 - 0.0002 20.6 0.0 0.00022 20.4 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein cobW PF02492.19 ORF72501 - 0.00033 20.3 0.5 0.0023 17.6 0.0 2.0 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain dNK PF01712.19 ORF72501 - 0.0005 20.0 0.4 0.0068 16.3 0.1 2.1 2 0 0 2 2 2 1 Deoxynucleoside kinase AAA_14 PF13173.6 ORF72501 - 0.00082 19.4 0.3 0.004 17.2 0.1 2.1 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF72501 - 0.00083 19.8 0.0 0.0011 19.4 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain TsaE PF02367.17 ORF72501 - 0.0009 19.2 0.0 0.0015 18.5 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 ORF72501 - 0.0012 18.8 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain NACHT PF05729.12 ORF72501 - 0.0019 18.2 0.0 0.0026 17.7 0.0 1.2 1 0 0 1 1 1 1 NACHT domain AAA PF00004.29 ORF72501 - 0.002 18.5 0.6 0.0039 17.6 0.1 1.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 ORF72501 - 0.0024 18.2 0.1 0.0066 16.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 ORF72501 - 0.0026 17.8 0.3 0.0071 16.4 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_17 PF13207.6 ORF72501 - 0.004 17.6 0.1 0.0068 16.8 0.1 1.4 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF72501 - 0.0061 16.9 0.3 0.018 15.4 0.0 1.9 2 1 0 2 2 1 1 RNA helicase AAA_33 PF13671.6 ORF72501 - 0.0063 16.7 0.2 0.044 13.9 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF72501 - 0.0066 16.0 0.0 0.009 15.5 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region Dynamin_N PF00350.23 ORF72501 - 0.0072 16.4 0.5 0.024 14.7 0.1 1.9 2 0 0 2 2 2 1 Dynamin family AAA_18 PF13238.6 ORF72501 - 0.01 16.4 0.7 0.02 15.5 0.3 1.6 2 0 0 2 2 2 0 AAA domain RuvB_N PF05496.12 ORF72501 - 0.015 15.1 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_23 PF13476.6 ORF72501 - 0.018 15.5 1.3 0.035 14.6 0.1 1.8 1 1 1 2 2 2 0 AAA domain Septin PF00735.18 ORF72501 - 0.022 14.1 0.2 0.055 12.7 0.0 1.6 2 0 0 2 2 2 0 Septin AAA_29 PF13555.6 ORF72501 - 0.027 14.2 0.0 0.057 13.2 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 ORF72501 - 0.029 13.8 0.2 0.11 12.0 0.0 1.8 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain PduV-EutP PF10662.9 ORF72501 - 0.032 14.0 0.0 0.078 12.7 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation NTPase_1 PF03266.15 ORF72501 - 0.033 14.1 1.0 0.054 13.4 0.2 1.7 2 1 0 2 2 2 0 NTPase Zeta_toxin PF06414.12 ORF72501 - 0.038 13.3 0.0 0.092 12.0 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin MobB PF03205.14 ORF72501 - 0.049 13.5 0.1 0.095 12.6 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B PRK PF00485.18 ORF72501 - 0.054 13.2 0.1 0.15 11.8 0.0 1.7 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family ATP-synt_ab PF00006.25 ORF72501 - 0.054 13.1 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_30 PF13604.6 ORF72501 - 0.057 13.1 0.0 0.087 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 ORF72501 - 0.072 12.9 0.1 0.16 11.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_PrkA PF08298.11 ORF72501 - 0.084 11.8 0.0 0.15 11.0 0.0 1.3 1 0 0 1 1 1 0 PrkA AAA domain FtsK_SpoIIIE PF01580.18 ORF72501 - 0.085 12.2 0.1 0.17 11.2 0.0 1.5 1 1 0 1 1 1 0 FtsK/SpoIIIE family AAA_28 PF13521.6 ORF72501 - 0.11 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 ORF72501 - 0.12 11.9 1.7 0.18 11.3 0.1 1.8 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_27 PF13514.6 ORF72501 - 0.17 11.4 0.0 0.27 10.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain FA_desaturase PF00487.24 ORF71804 - 0.05 13.4 0.3 0.073 12.9 0.3 1.3 1 1 0 1 1 1 0 Fatty acid desaturase DUF4781 PF16013.5 ORF71804 - 0.19 10.5 4.7 0.23 10.2 4.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) Mit_ribos_Mrp51 PF11709.8 ORF71804 - 0.22 11.1 0.0 0.26 10.8 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit Cupin_8 PF13621.6 ORF71284 - 0.022 14.5 0.0 0.03 14.0 0.0 1.3 1 0 0 1 1 1 0 Cupin-like domain CaMKII_AD PF08332.10 ORF70378 - 0.034 14.3 0.0 0.046 13.9 0.0 1.3 1 0 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II association domain TRAPPC-Trs85 PF12739.7 ORF69818 - 0.13 11.2 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit Ribosomal_S17e PF00833.18 ORF6922 - 3.5e-61 204.5 2.5 4e-61 204.3 2.5 1.0 1 0 0 1 1 1 1 Ribosomal S17 HTH_Tnp_1_2 PF13022.6 ORF6922 - 0.083 13.1 0.2 3.4 7.9 0.0 2.4 1 1 1 2 2 2 0 Helix-turn-helix of insertion element transposase WES_acyltransf PF03007.16 ORF68518 - 0.027 14.2 0.4 0.032 14.0 0.4 1.1 1 0 0 1 1 1 0 Wax ester synthase-like Acyl-CoA acyltransferase domain Ribosomal_L36 PF00444.18 ORF68273 - 0.14 12.3 0.9 0.24 11.6 0.9 1.3 1 0 0 1 1 1 0 Ribosomal protein L36 ApoLp-III PF07464.11 ORF67949 - 0.0011 19.1 1.3 0.2 11.7 0.0 2.0 2 0 0 2 2 2 2 Apolipophorin-III precursor (apoLp-III) DUF4004 PF13171.6 ORF67949 - 0.05 13.9 1.3 0.074 13.3 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4004) DUF5082 PF16888.5 ORF67949 - 0.086 13.1 2.9 0.09 13.1 0.6 1.8 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) Baculo_PEP_C PF04513.12 ORF67949 - 0.11 12.5 0.6 1.4 8.9 0.6 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF600 PF04634.12 ORF66539 - 0.0023 18.0 0.6 0.0031 17.6 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF600 Med17 PF10156.9 ORF66539 - 0.0064 15.3 4.6 0.0067 15.2 4.6 1.1 1 0 0 1 1 1 1 Subunit 17 of Mediator complex LPD39 PF18858.1 ORF66539 - 0.0088 16.2 6.2 0.011 15.8 6.2 1.1 1 0 0 1 1 1 1 Large polyvalent protein associated domain 39 MutS_II PF05188.17 ORF66539 - 0.017 15.4 0.9 0.019 15.2 0.9 1.2 1 0 0 1 1 1 0 MutS domain II PGK PF00162.19 ORF66539 - 0.38 9.6 1.8 0.45 9.4 1.8 1.0 1 0 0 1 1 1 0 Phosphoglycerate kinase DUF445 PF04286.12 ORF65745 - 0.12 12.2 0.0 0.13 12.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF445) Neuraminidase PF18413.1 ORF65733 - 0.086 12.5 3.0 0.11 12.1 3.0 1.2 1 0 0 1 1 1 0 Neuraminidase-like domain DUF2730 PF10805.8 ORF65733 - 0.11 12.6 3.2 0.19 11.9 3.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) Pox_Ag35 PF03286.14 ORF65733 - 0.19 11.5 8.5 0.24 11.2 8.5 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein APG6_N PF17675.1 ORF65733 - 0.69 10.4 13.1 0.85 10.2 13.1 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF65733 - 0.94 7.3 6.4 0.92 7.3 6.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CoA_binding_2 PF13380.6 ORF64799 - 3.5e-12 46.8 0.0 4.2e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 CoA binding domain Cdd1 PF11731.8 ORF64799 - 0.0038 17.4 0.0 0.006 16.8 0.0 1.3 1 0 0 1 1 1 1 Pathogenicity locus TPP_enzyme_N PF02776.18 ORF64799 - 0.039 13.6 0.0 0.064 12.9 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MORN PF02493.20 ORF63573 - 1.7e-07 30.7 5.8 0.00033 20.4 0.2 3.6 3 0 0 3 3 3 3 MORN repeat Silic_transp PF03842.13 ORF63573 - 0.16 10.2 0.1 0.18 10.1 0.1 1.1 1 0 0 1 1 1 0 Silicon transporter Helicase_C_2 PF13307.6 ORF62912 - 2.7e-12 47.2 1.4 5.1e-12 46.3 1.4 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain TPR_12 PF13424.6 ORF62155 - 5.2e-06 26.6 1.6 8.9e-05 22.7 0.1 2.1 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF62155 - 0.0061 16.7 2.2 4 7.9 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat EIIA-man PF03610.16 ORF62155 - 0.023 14.9 0.0 0.058 13.6 0.0 1.7 1 1 0 1 1 1 0 PTS system fructose IIA component TPR_14 PF13428.6 ORF62155 - 0.067 14.0 7.9 1.2 10.2 1.3 2.8 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF62155 - 0.09 12.9 1.8 2.3 8.5 0.4 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF62155 - 0.19 11.6 0.9 4.3 7.3 0.1 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat His_Phos_1 PF00300.22 ORF61639 - 8.9e-28 97.3 0.0 9.9e-28 97.2 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) BT1 PF03092.16 ORF60142 - 4.1e-11 41.8 0.0 4.5e-11 41.7 0.0 1.0 1 0 0 1 1 1 1 BT1 family ATG22 PF11700.8 ORF60142 - 0.019 13.6 0.2 0.023 13.4 0.2 1.1 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like Rotamase PF00639.21 ORF59040 - 5.9e-14 52.8 0.0 9.2e-14 52.2 0.0 1.4 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF59040 - 1.6e-12 48.0 0.0 2.7e-12 47.3 0.0 1.4 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF59040 - 5.2e-06 27.3 0.0 5.7e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 PPIC-type PPIASE domain DUF1216 PF06746.11 ORF58726 - 0.002 18.1 1.6 0.002 18.1 1.6 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1216) NanE PF04131.14 ORF58726 - 0.039 13.1 1.3 0.053 12.7 0.8 1.5 1 1 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase Mem_trans PF03547.18 ORF58726 - 0.32 9.3 1.4 0.35 9.2 1.4 1.1 1 0 0 1 1 1 0 Membrane transport protein Phage_int_SAM_1 PF02899.17 ORF58609 - 0.069 13.5 0.5 0.11 12.8 0.5 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Peptidase_S28 PF05577.12 ORF58361 - 9.2e-17 60.9 0.0 1e-16 60.8 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Thioredoxin_7 PF13899.6 ORF58361 - 0.074 13.2 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like ADK PF00406.22 ORF58109 - 1.2e-08 35.2 0.0 2e-08 34.5 0.0 1.3 1 1 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF58109 - 4e-07 30.5 0.0 5.5e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain Glyco_tran_28_C PF04101.16 ORF55673 - 0.019 15.0 0.2 0.024 14.6 0.2 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 28 C-terminal domain TMCO5 PF14992.6 ORF55590 - 0.025 14.2 0.4 0.029 14.0 0.4 1.1 1 0 0 1 1 1 0 TMCO5 family DUF2840 PF11000.8 ORF55590 - 0.14 12.0 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2840) UCH PF00443.29 ORF54560 - 7.9e-10 38.7 0.1 8.4e-10 38.6 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF54560 - 6.8e-05 22.6 0.0 8.1e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MtrE PF04206.12 ORF53992 - 2.2 7.5 7.6 2.8 7.2 7.6 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit E TAFH PF07531.14 ORF53565 - 0.013 15.6 0.4 0.019 15.1 0.4 1.3 1 0 0 1 1 1 0 NHR1 homology to TAF PAN_4 PF14295.6 ORF52236 - 0.21 11.5 3.6 1.6 8.7 0.1 3.0 3 0 0 3 3 3 0 PAN domain Drc1-Sld2 PF11719.8 ORF5126 - 0.01 15.4 1.1 0.013 15.1 1.1 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein DUF3589 PF12141.8 ORF51011 - 0.0038 15.9 2.0 0.0039 15.9 2.0 1.0 1 0 0 1 1 1 1 Beta-mannosyltransferases TFIIA_gamma_N PF02268.16 ORF50949 - 1.4e-11 44.2 0.1 2.3e-11 43.5 0.1 1.4 1 0 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit, helical domain Glyco_hydro_68 PF02435.16 ORF50949 - 0.0088 14.9 0.1 0.0088 14.9 0.1 1.1 1 0 0 1 1 1 1 Levansucrase/Invertase TFIIA_gamma_C PF02751.14 ORF50949 - 0.042 14.0 0.0 0.13 12.5 0.0 1.8 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit Pkinase PF00069.25 ORF47917 - 0.029 13.7 0.0 0.035 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain DUF2959 PF11172.8 ORF47917 - 0.075 13.2 0.1 0.088 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2959) Helicase_C_2 PF13307.6 ORF47899 - 2.7e-12 47.2 1.4 5.1e-12 46.3 1.4 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain DUF3857 PF12969.7 ORF46931 - 0.018 15.1 0.2 0.028 14.5 0.2 1.2 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3857) Vif PF00559.17 ORF46781 - 0.0044 16.7 0.7 0.0054 16.5 0.7 1.1 1 0 0 1 1 1 1 Retroviral Vif (Viral infectivity) protein Mito_carr PF00153.27 ORF45984 - 2.6e-17 62.5 1.9 2.2e-13 49.9 0.6 2.3 2 1 0 2 2 2 2 Mitochondrial carrier protein Sugar_tr PF00083.24 ORF45721 - 0.0012 17.8 0.5 0.0015 17.5 0.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter PTR2 PF00854.21 ORF45721 - 0.0086 14.9 0.1 0.01 14.7 0.1 1.1 1 0 0 1 1 1 1 POT family Pkinase PF00069.25 ORF45705 - 4.1e-29 101.7 0.3 5.1e-29 101.4 0.3 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45705 - 4e-20 72.2 0.0 4.5e-20 72.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF45705 - 9.9e-05 21.3 0.1 0.00012 21.0 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF45705 - 0.00014 21.3 0.0 0.0005 19.5 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Seadorna_VP7 PF07387.11 ORF45705 - 0.00077 18.6 0.1 0.0012 17.9 0.1 1.4 1 0 0 1 1 1 1 Seadornavirus VP7 YrbL-PhoP_reg PF10707.9 ORF45705 - 0.011 15.3 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Kdo PF06293.14 ORF45705 - 0.015 14.7 0.0 0.022 14.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF45705 - 0.019 14.9 0.0 0.022 14.7 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF45705 - 0.083 12.5 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 ORF45705 - 0.094 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 RIO1 family Methyltransf_22 PF13383.6 ORF45052 - 0.056 13.0 0.4 0.07 12.7 0.4 1.1 1 0 0 1 1 1 0 Methyltransferase domain Pkinase PF00069.25 ORF43388 - 4.1e-29 101.7 0.3 5.1e-29 101.4 0.3 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF43388 - 4e-20 72.2 0.0 4.5e-20 72.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF43388 - 9.9e-05 21.3 0.1 0.00012 21.0 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF43388 - 0.00014 21.3 0.0 0.0005 19.5 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Seadorna_VP7 PF07387.11 ORF43388 - 0.00077 18.6 0.1 0.0012 17.9 0.1 1.4 1 0 0 1 1 1 1 Seadornavirus VP7 YrbL-PhoP_reg PF10707.9 ORF43388 - 0.011 15.3 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Kdo PF06293.14 ORF43388 - 0.015 14.7 0.0 0.022 14.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF43388 - 0.019 14.9 0.0 0.022 14.7 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF43388 - 0.083 12.5 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 ORF43388 - 0.094 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 RIO1 family TMCO5 PF14992.6 ORF42584 - 0.025 14.2 0.4 0.029 14.0 0.4 1.1 1 0 0 1 1 1 0 TMCO5 family DUF2840 PF11000.8 ORF42584 - 0.14 12.0 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2840) zf-C2H2_2 PF12756.7 ORF42502 - 0.013 15.8 0.3 0.021 15.2 0.3 1.3 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Acyl_transf_3 PF01757.22 ORF42500 - 0.0026 16.9 14.0 0.0039 16.3 14.0 1.3 1 1 0 1 1 1 1 Acyltransferase family DUF4686 PF15742.5 ORF41509 - 0.0057 15.8 5.2 0.0099 15.1 1.7 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4686) CCDC92 PF14916.6 ORF41509 - 0.076 12.8 0.8 0.076 12.8 0.8 1.9 2 0 0 2 2 2 0 Coiled-coil domain of unknown function LsmAD PF06741.13 ORF41509 - 0.094 13.3 0.3 0.094 13.3 0.3 2.0 2 1 0 2 2 2 0 LsmAD domain DUF4407 PF14362.6 ORF40599 - 0.33 10.3 5.0 0.36 10.1 5.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DDHD PF02862.17 ORF40599 - 0.9 9.7 5.2 1.1 9.4 5.2 1.0 1 0 0 1 1 1 0 DDHD domain AAA_11 PF13086.6 ORF40599 - 2 8.2 10.3 2.3 7.9 10.3 1.1 1 0 0 1 1 1 0 AAA domain Trs65 PF12735.7 ORF39944 - 0.0017 17.8 0.0 0.53 9.6 0.0 2.0 1 1 1 2 2 2 2 TRAPP trafficking subunit Trs65 ApbE PF02424.15 ORF39862 - 2.5e-33 115.7 0.0 2.8e-33 115.5 0.0 1.0 1 0 0 1 1 1 1 ApbE family IBR PF01485.21 ORF39251 - 6.9e-05 23.0 16.4 8.6e-05 22.7 9.6 2.3 2 0 0 2 2 2 1 IBR domain, a half RING-finger domain zinc_ribbon_4 PF13717.6 ORF39251 - 0.044 13.7 12.6 0.38 10.7 0.2 3.4 3 0 0 3 3 3 0 zinc-ribbon domain DUF1851 PF08906.11 ORF39251 - 0.14 12.1 0.1 0.22 11.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1851) zf-piccolo PF05715.13 ORF39251 - 1.4 9.1 15.8 0.26 11.5 6.8 2.7 2 1 1 3 3 3 0 Piccolo Zn-finger zinc_ribbon_5 PF13719.6 ORF39251 - 3 7.7 9.8 4.8 7.0 0.1 3.2 3 0 0 3 3 3 0 zinc-ribbon domain zf-C3HC4_2 PF13923.6 ORF39251 - 3.9 7.4 15.0 5 7.1 4.2 3.7 4 0 0 4 4 4 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF39251 - 5.2 7.5 15.8 19 5.7 0.1 3.4 3 1 0 3 3 3 0 Ring finger domain Polysacc_deac_3 PF15421.6 ORF37673 - 0.022 13.3 0.8 0.029 12.9 0.6 1.3 1 1 0 1 1 1 0 Putative polysaccharide deacetylase BING4CT PF08149.11 ORF37673 - 0.085 12.7 0.4 0.25 11.1 0.4 1.8 2 0 0 2 2 2 0 BING4CT (NUC141) domain RCC1_2 PF13540.6 ORF37454 - 0.00017 21.3 11.6 0.069 13.0 0.3 3.4 3 1 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF37454 - 0.066 13.3 1.7 10 6.2 0.0 2.9 1 1 2 3 3 3 0 Uncharacterised ACR, YagE family COG1723 His_Phos_1 PF00300.22 ORF35639 - 9.1e-10 38.5 0.0 1.7e-09 37.7 0.0 1.5 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) BTK PF00779.19 ORF35638 - 0.15 11.9 12.8 0.11 12.3 3.6 2.6 2 0 0 2 2 2 0 BTK motif Transformer PF06495.11 ORF33433 - 0.2 11.7 21.0 0.27 11.3 21.0 1.3 1 0 0 1 1 1 0 Fruit fly transformer protein DUF5352 PF17303.2 ORF33097 - 1.1 9.1 6.4 0.2 11.5 2.7 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5352) SRP14 PF02290.15 ORF32447 - 0.026 14.9 1.0 0.061 13.7 1.0 1.8 1 1 0 1 1 1 0 Signal recognition particle 14kD protein NAD_binding_2 PF03446.15 ORF32447 - 0.15 12.2 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase XRN1_D2_D3 PF18334.1 ORF32447 - 0.2 11.9 4.7 6.4 7.1 0.3 2.3 2 1 0 2 2 2 0 Exoribonuclease Xrn1 D2/D3 domain PEPcase PF00311.17 ORF32447 - 0.28 9.2 3.8 0.4 8.7 3.4 1.5 1 1 0 1 1 1 0 Phosphoenolpyruvate carboxylase EST1 PF10374.9 ORF32447 - 0.53 10.9 4.0 0.69 10.5 4.0 1.2 1 1 0 1 1 1 0 Telomerase activating protein Est1 TilS PF09179.11 ORF31694 - 0.014 15.8 4.8 0.014 15.8 4.8 1.9 2 0 0 2 2 2 0 TilS substrate binding domain ApoLp-III PF07464.11 ORF30516 - 0.0011 19.1 1.3 0.2 11.7 0.0 2.0 2 0 0 2 2 2 2 Apolipophorin-III precursor (apoLp-III) DUF4004 PF13171.6 ORF30516 - 0.05 13.9 1.3 0.074 13.3 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4004) DUF5082 PF16888.5 ORF30516 - 0.086 13.1 2.9 0.09 13.1 0.6 1.8 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) Baculo_PEP_C PF04513.12 ORF30516 - 0.11 12.5 0.6 1.4 8.9 0.6 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Herpes_U5 PF05999.11 ORF28525 - 0.009 14.8 0.1 0.015 14.1 0.1 1.3 1 1 0 1 1 1 1 Herpesvirus U5-like family Glyco_hydro_42C PF08533.10 ORF28053 - 0.057 13.1 1.7 5.2 6.9 0.1 3.0 3 0 0 3 3 3 0 Beta-galactosidase C-terminal domain MFS_1 PF07690.16 ORF28034 - 2.1e-10 40.1 4.1 3.4e-10 39.4 3.2 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF28034 - 7.5e-05 21.8 0.0 7.9e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 ORF28034 - 0.00022 20.2 0.5 0.00025 20.1 0.5 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter TRI12 PF06609.13 ORF28034 - 0.00096 17.7 0.1 0.0011 17.5 0.1 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 ORF28034 - 0.004 15.8 1.8 0.0047 15.5 0.8 1.5 1 1 0 1 1 1 1 MFS/sugar transport protein Nuc_H_symport PF03825.16 ORF28034 - 0.069 12.1 0.1 0.09 11.7 0.1 1.2 1 0 0 1 1 1 0 Nucleoside H+ symporter MFS_3 PF05977.13 ORF28034 - 0.15 10.4 2.1 1.9 6.8 0.2 1.8 1 1 0 1 1 1 0 Transmembrane secretion effector MORN PF02493.20 ORF2769 - 0.033 14.1 1.6 0.12 12.3 0.4 2.4 2 0 0 2 2 2 0 MORN repeat zf-C2H2_3 PF13878.6 ORF2769 - 0.038 13.8 0.1 0.071 12.9 0.1 1.4 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO Kinesin_assoc PF16183.5 ORF27061 - 0.14 12.3 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Kinesin-associated TP2 PF01254.18 ORF27061 - 0.78 10.4 11.1 1.1 9.9 11.0 1.4 1 1 0 1 1 1 0 Nuclear transition protein 2 Hydrolase_4 PF12146.8 ORF26317 - 0.00027 20.3 0.1 0.00045 19.6 0.0 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF26317 - 0.0094 15.4 0.0 0.016 14.7 0.0 1.5 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_4 PF08386.10 ORF26317 - 0.015 15.4 0.0 0.017 15.2 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein DLH PF01738.18 ORF26317 - 0.027 14.0 0.1 0.041 13.4 0.1 1.5 1 1 0 1 1 1 0 Dienelactone hydrolase family PH_3 PF14593.6 ORF25449 - 7.1e-12 45.4 1.4 9e-12 45.0 1.4 1.1 1 0 0 1 1 1 1 PH domain PH PF00169.29 ORF25449 - 7.2e-06 26.5 0.3 1e-05 25.9 0.3 1.2 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF25449 - 0.00033 20.9 0.8 0.00044 20.5 0.8 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain PH_17 PF18012.1 ORF25449 - 0.019 14.7 0.0 0.35 10.6 0.0 2.2 2 0 0 2 2 2 0 PH domain PH_11 PF15413.6 ORF25449 - 0.043 14.2 2.0 1.6 9.2 2.0 2.1 1 1 0 1 1 1 0 Pleckstrin homology domain PH_2 PF08458.10 ORF25449 - 0.07 13.5 0.2 0.27 11.6 0.2 1.9 1 1 0 1 1 1 0 Plant pleckstrin homology-like region Methyltransf_16 PF10294.9 ORF22158 - 1.8e-10 40.8 0.0 2.1e-10 40.6 0.0 1.0 1 0 0 1 1 1 1 Lysine methyltransferase DUF436 PF04260.12 ORF22158 - 0.014 15.0 0.4 0.022 14.3 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF436) DUF4116 PF13475.6 ORF22037 - 8.7e-13 47.8 0.2 6.8e-08 32.1 0.0 3.1 3 0 0 3 3 3 2 Domain of unknown function (DUF4116) AAA_assoc_2 PF16193.5 ORF22037 - 0.02 15.3 0.9 0.03 14.7 0.8 1.4 1 1 0 1 1 1 0 AAA C-terminal domain EF-hand_7 PF13499.6 ORF20957 - 1.8e-12 47.5 0.9 2.1e-07 31.3 0.4 3.2 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF20957 - 2.3e-11 42.7 1.7 0.073 13.0 0.0 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_1 PF00036.32 ORF20957 - 4.3e-10 38.4 4.9 0.032 13.8 0.5 4.2 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF20957 - 6.5e-10 38.7 1.3 5.4e-06 26.2 0.4 3.4 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF20957 - 0.0013 18.1 0.4 4.7 6.9 0.0 3.8 4 0 0 4 4 4 1 EF hand Glyco_hydro_39 PF01229.17 ORF20957 - 0.016 13.8 0.0 0.016 13.8 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 39 EF-hand_4 PF12763.7 ORF20957 - 0.018 15.0 0.5 0.074 13.0 0.0 1.9 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand SAM35 PF10806.8 ORF20563 - 0.0093 16.2 0.4 0.018 15.3 0.4 1.7 1 1 0 1 1 1 1 SAM35, subunit of SAM coomplex Herpes_LMP1 PF05297.11 ORF20563 - 0.71 9.0 2.8 0.84 8.8 2.8 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF1077 PF06417.12 ORF20548 - 6.7e-19 68.0 5.7 9.8e-19 67.5 5.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1077) Acyl_transf_3 PF01757.22 ORF18824 - 0.077 12.0 0.0 0.077 12.0 0.0 1.1 1 0 0 1 1 1 0 Acyltransferase family DUF2523 PF10734.9 ORF17491 - 0.036 14.6 2.1 0.048 14.2 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2523) zf-RING_2 PF13639.6 ORF16987 - 1.2e-08 35.2 4.4 1.2e-08 35.2 4.4 2.1 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF16987 - 1.3e-08 34.5 8.5 2.9e-08 33.3 8.5 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF16987 - 0.00011 22.2 5.5 0.00046 20.1 2.8 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF16987 - 0.0011 18.7 3.3 0.0011 18.7 3.3 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF16987 - 0.039 13.8 4.9 0.039 13.8 4.9 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF16987 - 1.4 9.0 9.9 0.47 10.5 3.0 2.3 2 0 0 2 2 2 0 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF16987 - 2.5 7.8 9.3 0.061 13.0 2.9 1.7 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 ORF16987 - 6 7.2 14.2 0.45 10.8 7.5 2.3 2 1 0 2 2 2 0 RING-H2 zinc finger domain Syndecan PF01034.20 ORF16602 - 0.47 10.4 5.4 1 9.3 0.3 2.3 2 0 0 2 2 2 0 Syndecan domain ECSCR PF15820.5 ORF16602 - 5.1 7.0 6.3 2.4 8.0 0.7 2.1 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator DUF1461 PF07314.11 ORF16602 - 8.7 6.2 14.0 0.22 11.4 2.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1461) Profilin PF00235.19 ORF15967 - 0.0086 16.3 0.1 0.017 15.4 0.1 1.4 1 1 0 1 1 1 1 Profilin Snapin_Pallidin PF14712.6 ORF15967 - 0.015 15.7 2.8 0.23 11.9 0.5 2.1 2 0 0 2 2 2 0 Snapin/Pallidin EF-hand_7 PF13499.6 ORF15596 - 1.4e-05 25.5 2.6 6.5e-05 23.3 0.3 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF15596 - 0.0007 19.3 0.6 0.011 15.6 0.0 2.9 3 1 0 3 3 3 1 EF-hand domain EFhand_Ca_insen PF08726.10 ORF15596 - 0.0012 18.9 0.1 0.0032 17.5 0.0 1.8 2 0 0 2 2 2 1 Ca2+ insensitive EF hand PHB_acc_N PF07879.11 ORF15596 - 0.013 15.6 0.0 0.032 14.3 0.0 1.6 1 0 0 1 1 1 0 PHB/PHA accumulation regulator DNA-binding domain HyaE PF07449.11 ORF14218 - 5.6e-44 148.5 0.0 6.4e-44 148.3 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE DUF3530 PF12048.8 ORF14218 - 0.086 12.3 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Hum_adeno_E3A PF05393.11 ORF14009 - 0.42 10.6 3.4 0.91 9.5 3.4 1.7 1 1 0 1 1 1 0 Human adenovirus early E3A glycoprotein FSA_C PF10479.9 ORF14009 - 1.3 7.1 8.2 1.3 7.1 8.2 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF4834 PF16118.5 ORF14009 - 1.6 9.7 4.9 18 6.4 3.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) SSP160 PF06933.11 ORF14009 - 2 6.5 16.2 2.4 6.3 16.2 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 PX PF00787.24 ORF13969 - 1.4e-11 44.4 1.3 1.6e-11 44.2 1.3 1.1 1 0 0 1 1 1 1 PX domain TRAPPC-Trs85 PF12739.7 ORF12904 - 0.13 11.2 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit DUF1160 PF06648.11 ORF12877 - 0.028 14.4 0.4 0.057 13.4 0.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1160) DUF4689 PF15755.5 ORF12585 - 0.051 13.2 0.4 0.061 12.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4689) ubiquitin PF00240.23 ORF11244 - 0.00017 21.3 0.3 0.00029 20.5 0.1 1.5 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF11244 - 0.00033 20.4 0.2 0.00049 19.9 0.2 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Syndecan PF01034.20 ORF111943 - 0.47 10.4 5.4 1 9.3 0.3 2.3 2 0 0 2 2 2 0 Syndecan domain ECSCR PF15820.5 ORF111943 - 5.1 7.0 6.3 2.4 8.0 0.7 2.1 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator DUF1461 PF07314.11 ORF111943 - 8.7 6.2 14.0 0.22 11.4 2.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1461) zf-RING_2 PF13639.6 ORF111703 - 1.2e-08 35.2 4.4 1.2e-08 35.2 4.4 2.1 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF111703 - 1.3e-08 34.5 8.5 2.9e-08 33.3 8.5 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF111703 - 0.00011 22.2 5.5 0.00046 20.1 2.8 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF111703 - 0.0011 18.7 3.3 0.0011 18.7 3.3 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF111703 - 0.039 13.8 4.9 0.039 13.8 4.9 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF111703 - 1.4 9.0 9.9 0.47 10.5 3.0 2.3 2 0 0 2 2 2 0 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF111703 - 2.5 7.8 9.3 0.061 13.0 2.9 1.7 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 ORF111703 - 6 7.2 14.2 0.45 10.8 7.5 2.3 2 1 0 2 2 2 0 RING-H2 zinc finger domain GH43_C2 PF17851.1 ORF11135 - 3.8e-06 26.8 0.0 4.5e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Beta xylosidase C-terminal Concanavalin A-like domain PRP38_assoc PF12871.7 ORF110340 - 0.0084 16.7 13.4 0.0084 16.7 13.4 1.6 2 0 0 2 2 2 1 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Macoilin PF09726.9 ORF110340 - 1.2 7.6 9.6 1.5 7.3 9.6 1.0 1 0 0 1 1 1 0 Macoilin family CDC45 PF02724.14 ORF110340 - 3.6 5.8 18.0 4.4 5.5 18.0 1.1 1 0 0 1 1 1 0 CDC45-like protein TLP-20 PF06088.11 ORF110340 - 8.6 6.2 12.1 13 5.6 12.1 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) DUF3857 PF12969.7 ORF108966 - 0.018 15.1 0.2 0.028 14.5 0.2 1.2 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3857) FMN_red PF03358.15 ORF108769 - 3.2e-15 56.2 0.0 4.7e-15 55.7 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Fib_alpha PF08702.10 ORF108442 - 8.6e-06 26.0 12.9 1.5e-05 25.2 12.9 1.3 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family DUF641 PF04859.12 ORF108442 - 2.2e-05 24.8 12.4 6.4e-05 23.3 3.8 2.1 1 1 1 2 2 2 1 Plant protein of unknown function (DUF641) PKcGMP_CC PF16808.5 ORF108442 - 6.1e-05 22.8 2.5 6.1e-05 22.8 2.5 3.0 3 0 0 3 3 3 1 Coiled-coil N-terminus of cGMP-dependent protein kinase VGPC1_C PF16799.5 ORF108442 - 0.0035 17.3 1.3 0.0079 16.1 1.3 1.6 1 0 0 1 1 1 1 C-terminal membrane-localisation domain of ion-channel, VCN1 Spc7 PF08317.11 ORF108442 - 0.004 16.1 13.1 0.0049 15.8 13.1 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein DHR10 PF18595.1 ORF108442 - 0.0058 16.7 4.3 0.0058 16.7 4.3 2.6 1 1 2 3 3 3 1 Designed helical repeat protein 10 domain DUF4407 PF14362.6 ORF108442 - 0.0067 15.8 6.3 0.0081 15.6 6.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Lebercilin PF15619.6 ORF108442 - 0.0082 15.8 15.2 0.064 12.9 15.1 1.9 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease XLF PF09302.11 ORF108442 - 0.0084 16.3 1.3 0.0084 16.3 1.3 2.1 1 1 0 2 2 2 1 XLF-Cernunnos, XRcc4-like factor, NHEJ component Prominin PF05478.11 ORF108442 - 0.009 14.0 10.6 0.011 13.8 10.6 1.0 1 0 0 1 1 1 1 Prominin HMMR_N PF15905.5 ORF108442 - 0.011 15.2 18.7 0.059 12.8 18.5 1.8 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal UPF0242 PF06785.11 ORF108442 - 0.013 15.6 14.8 0.018 15.2 14.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ERM PF00769.19 ORF108442 - 0.014 15.2 14.1 0.017 14.9 14.1 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family DUF3584 PF12128.8 ORF108442 - 0.016 12.7 12.4 0.022 12.3 12.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) TMF_DNA_bd PF12329.8 ORF108442 - 0.017 15.1 20.0 0.055 13.5 8.0 2.3 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF812 PF05667.11 ORF108442 - 0.023 13.6 14.0 0.026 13.4 14.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DivIC PF04977.15 ORF108442 - 0.025 14.4 13.1 0.24 11.2 4.6 2.5 1 1 0 2 2 2 0 Septum formation initiator TACC_C PF05010.14 ORF108442 - 0.028 14.2 15.6 0.27 11.0 10.2 2.0 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HIP1_clath_bdg PF16515.5 ORF108442 - 0.028 15.0 16.0 0.093 13.3 6.7 2.1 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Exonuc_VII_L PF02601.15 ORF108442 - 0.041 13.5 8.8 0.045 13.3 8.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fez1 PF06818.15 ORF108442 - 0.052 14.0 13.2 0.13 12.7 13.2 1.7 1 1 0 1 1 1 0 Fez1 ATG16 PF08614.11 ORF108442 - 0.058 13.6 12.5 0.087 13.0 10.1 1.9 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) FapA PF03961.13 ORF108442 - 0.064 11.9 11.0 0.095 11.3 11.0 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A ADIP PF11559.8 ORF108442 - 0.071 13.2 17.0 0.9 9.6 6.0 2.8 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding OmpH PF03938.14 ORF108442 - 0.081 13.3 15.7 0.22 11.9 15.7 1.7 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Tropomyosin_1 PF12718.7 ORF108442 - 0.088 13.0 19.0 0.087 13.0 12.2 2.0 1 1 1 2 2 2 0 Tropomyosin like GrpE PF01025.19 ORF108442 - 0.1 12.2 16.2 0.28 10.9 10.7 2.0 1 1 1 2 2 2 0 GrpE DUF4899 PF16240.5 ORF108442 - 0.11 11.6 7.7 0.033 13.4 1.5 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4899) Csm1_N PF18504.1 ORF108442 - 0.13 12.7 17.4 0.31 11.4 3.8 3.0 2 1 1 3 3 3 0 Csm1 N-terminal domain Cnn_1N PF07989.11 ORF108442 - 0.13 12.5 15.1 0.94 9.7 2.8 2.2 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF4140 PF13600.6 ORF108442 - 0.13 12.7 5.5 0.47 10.9 0.5 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Baculo_p24 PF05073.12 ORF108442 - 0.14 12.0 9.6 0.41 10.4 9.7 1.6 1 1 0 1 1 1 0 Baculovirus P24 capsid protein DUF4533 PF15047.6 ORF108442 - 0.16 11.5 13.6 1.7 8.1 4.5 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF4533) V_ATPase_I PF01496.19 ORF108442 - 0.18 9.7 9.8 0.2 9.5 9.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Golgin_A5 PF09787.9 ORF108442 - 0.19 11.2 14.1 0.019 14.5 4.9 1.9 1 1 1 2 2 2 0 Golgin subfamily A member 5 Prefoldin_2 PF01920.20 ORF108442 - 0.19 11.7 18.4 0.17 11.8 5.3 2.4 1 1 0 2 2 2 0 Prefoldin subunit Jnk-SapK_ap_N PF09744.9 ORF108442 - 0.21 11.8 16.5 0.051 13.8 7.5 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Dzip-like_N PF13815.6 ORF108442 - 0.21 11.6 13.0 0.42 10.6 3.4 2.2 1 1 0 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal DUF3573 PF12097.8 ORF108442 - 0.22 10.3 7.6 0.25 10.1 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) Spc42p PF11544.8 ORF108442 - 0.23 11.5 17.1 0.033 14.2 6.7 3.3 1 1 2 3 3 3 0 Spindle pole body component Spc42p Rootletin PF15035.6 ORF108442 - 0.23 11.4 14.1 0.37 10.8 14.1 1.3 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion BRE1 PF08647.11 ORF108442 - 0.24 11.5 19.2 3.3 7.8 17.0 2.3 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase Lipoprotein_6 PF01441.19 ORF108442 - 0.25 11.3 8.9 1.2 9.1 8.9 1.9 1 1 0 1 1 1 0 Lipoprotein YtxH PF12732.7 ORF108442 - 0.28 11.8 9.3 16 6.1 9.3 2.4 1 1 0 1 1 1 0 YtxH-like protein DUF4200 PF13863.6 ORF108442 - 0.28 11.6 18.6 0.13 12.7 16.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF948 PF06103.11 ORF108442 - 0.33 11.2 5.1 7.5 6.9 1.0 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Laminin_II PF06009.12 ORF108442 - 0.33 11.0 8.4 1.5 8.8 8.3 1.9 1 1 0 1 1 1 0 Laminin Domain II FliD_C PF07195.12 ORF108442 - 0.35 10.3 12.9 0.052 13.0 2.7 2.1 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus NPV_P10 PF05531.12 ORF108442 - 0.43 11.1 7.3 0.49 10.9 1.2 2.2 1 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Sec2p PF06428.11 ORF108442 - 0.51 10.4 15.8 1.1 9.3 7.4 2.1 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p Mvb12 PF09452.10 ORF108442 - 0.51 10.8 6.1 0.28 11.7 2.6 2.0 1 1 1 2 2 2 0 ESCRT-I subunit Mvb12 PhoU PF01895.19 ORF108442 - 0.53 10.8 4.9 1.1 9.8 0.6 2.2 1 1 0 2 2 2 0 PhoU domain ZnuA PF01297.17 ORF108442 - 0.54 9.6 4.9 1.4 8.2 4.8 1.6 1 1 0 1 1 1 0 Zinc-uptake complex component A periplasmic Med9 PF07544.13 ORF108442 - 0.57 10.3 13.9 0.4 10.8 3.6 2.6 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 APG6_N PF17675.1 ORF108442 - 0.62 10.6 18.5 0.44 11.1 9.4 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region RPW8 PF05659.11 ORF108442 - 0.66 9.7 8.9 0.86 9.3 4.4 2.4 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Rho_Binding PF08912.11 ORF108442 - 0.66 10.8 17.1 3.2e+03 -1.0 17.1 2.7 1 1 0 1 1 0 0 Rho Binding SlyX PF04102.12 ORF108442 - 0.73 10.5 9.0 1.8 9.2 3.3 2.6 1 1 0 2 2 2 0 SlyX DUF5082 PF16888.5 ORF108442 - 0.76 10.1 14.3 1.4 9.2 14.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) DUF3837 PF12939.7 ORF108442 - 0.77 10.2 8.9 0.25 11.8 2.9 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3837) KxDL PF10241.9 ORF108442 - 0.82 10.0 13.1 2.9 8.2 4.4 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein Prefoldin PF02996.17 ORF108442 - 1 9.3 13.3 5 7.1 0.9 2.7 1 1 2 3 3 3 0 Prefoldin subunit Seryl_tRNA_N PF02403.22 ORF108442 - 1.2 9.4 16.2 1 9.6 4.2 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF2935 PF11155.8 ORF108442 - 1.2 9.4 9.1 71 3.8 9.1 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) DUF16 PF01519.16 ORF108442 - 1.3 9.5 14.0 0.23 11.9 3.3 2.2 1 1 1 2 2 2 0 Protein of unknown function DUF16 Lectin_N PF03954.14 ORF108442 - 1.4 8.7 8.5 0.3 10.8 1.3 2.1 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Cluap1 PF10234.9 ORF108442 - 1.6 8.1 15.7 0.16 11.3 3.8 2.1 1 1 1 2 2 2 0 Clusterin-associated protein-1 CCDC-167 PF15188.6 ORF108442 - 1.7 9.1 9.5 14 6.1 8.7 2.2 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF3450 PF11932.8 ORF108442 - 1.8 7.8 14.8 1.3 8.2 10.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF3552 PF12072.8 ORF108442 - 1.8 8.0 15.7 4.2 6.7 15.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) FlaC_arch PF05377.11 ORF108442 - 1.8 9.0 9.4 2.3 8.7 2.2 2.5 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) bZIP_1 PF00170.21 ORF108442 - 2.2 8.5 15.8 1.8 8.7 1.3 2.9 1 1 1 2 2 2 0 bZIP transcription factor DUF1664 PF07889.12 ORF108442 - 2.2 8.3 9.6 36 4.4 9.7 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Cep57_MT_bd PF06657.13 ORF108442 - 2.5 8.6 10.3 7.7 7.0 1.7 2.4 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 UPF0449 PF15136.6 ORF108442 - 2.5 8.6 11.3 24 5.5 6.4 2.9 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 Atg14 PF10186.9 ORF108442 - 2.8 6.9 13.4 0.61 9.1 5.0 2.0 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 BST2 PF16716.5 ORF108442 - 3.3 8.4 14.7 0.8 10.3 5.0 2.5 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 CENP-H PF05837.12 ORF108442 - 3.7 8.0 13.2 2.9 8.4 10.2 1.9 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Cep57_CLD_2 PF14197.6 ORF108442 - 3.8 7.7 12.0 3.1 7.9 2.4 2.4 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 TMPIT PF07851.13 ORF108442 - 4.1 6.6 14.3 59 2.8 14.2 2.0 1 1 0 1 1 1 0 TMPIT-like protein YabA PF06156.13 ORF108442 - 4.9 7.8 12.5 3.9e+02 1.7 12.5 2.2 1 1 0 1 1 1 0 Initiation control protein YabA Med4 PF10018.9 ORF108442 - 6.7 6.3 12.8 1.2 8.7 7.9 1.8 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 LMBR1 PF04791.16 ORF108442 - 7.5 5.3 11.6 7.9 5.3 11.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Swi5 PF07061.11 ORF108442 - 8.1 6.6 12.1 6.6e+02 0.5 12.1 2.6 1 1 0 1 1 1 0 Swi5 Rtf2 PF04641.12 ORF108413 - 0.0041 16.5 0.1 0.0076 15.6 0.1 1.4 1 1 0 1 1 1 1 Rtf2 RING-finger NUP50 PF08911.11 ORF10810 - 0.01 16.5 0.1 0.015 16.0 0.1 1.3 1 0 0 1 1 1 0 NUP50 (Nucleoporin 50 kDa) DUF1218 PF06749.12 ORF107256 - 0.07 13.7 0.0 0.094 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) DUF600 PF04634.12 ORF106394 - 0.0023 18.0 0.6 0.0031 17.6 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF600 Med17 PF10156.9 ORF106394 - 0.0064 15.3 4.6 0.0067 15.2 4.6 1.1 1 0 0 1 1 1 1 Subunit 17 of Mediator complex LPD39 PF18858.1 ORF106394 - 0.0088 16.2 6.2 0.011 15.8 6.2 1.1 1 0 0 1 1 1 1 Large polyvalent protein associated domain 39 MutS_II PF05188.17 ORF106394 - 0.017 15.4 0.9 0.019 15.2 0.9 1.2 1 0 0 1 1 1 0 MutS domain II PGK PF00162.19 ORF106394 - 0.38 9.6 1.8 0.45 9.4 1.8 1.0 1 0 0 1 1 1 0 Phosphoglycerate kinase Peptidase_S78 PF04586.17 ORF106249 - 0.11 12.7 1.1 1.6 8.9 0.0 2.1 1 1 1 2 2 2 0 Caudovirus prohead serine protease ERGIC_N PF13850.6 ORF106249 - 0.13 12.6 1.2 0.21 11.9 0.5 1.7 1 1 1 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Deltaretro_Tax PF05599.11 ORF106031 - 0.046 14.2 0.5 0.046 14.2 0.5 1.6 2 0 0 2 2 2 0 Deltaretrovirus Tax protein DUF937 PF06078.11 ORF105750 - 2.6e-11 44.3 4.8 3.2e-11 44.0 4.8 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF937) MarR_2 PF12802.7 ORF105750 - 0.16 11.9 0.1 1.1 9.2 0.0 2.1 2 0 0 2 2 2 0 MarR family Voltage_CLC PF00654.20 ORF105620 - 0.00019 20.8 12.3 0.00023 20.6 12.3 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel G3P_acyltransf PF02660.15 ORF105620 - 2.6 8.1 11.2 3.6 7.6 11.2 1.2 1 1 0 1 1 1 0 Glycerol-3-phosphate acyltransferase HMG_box_2 PF09011.10 ORF104673 - 0.097 13.3 1.7 0.26 11.9 1.7 1.9 1 1 0 1 1 1 0 HMG-box domain HMG_box PF00505.19 ORF104673 - 0.2 12.1 1.0 0.42 11.1 1.0 1.5 1 0 0 1 1 1 0 HMG (high mobility group) box MORN PF02493.20 ORF104262 - 7.7e-21 72.7 18.7 4.2e-08 32.6 0.6 5.1 4 1 0 4 4 4 4 MORN repeat UCH PF00443.29 ORF103638 - 7.9e-10 38.7 0.1 8.4e-10 38.6 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF103638 - 6.8e-05 22.6 0.0 8.1e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Copine PF07002.16 ORF103325 - 2.2e-36 125.4 0.2 2.6e-36 125.1 0.2 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF103325 - 2.6e-06 27.7 0.0 2.8e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 vWA found in TerF C terminus EF-hand_6 PF13405.6 ORF102454 - 3e-12 45.4 1.2 0.00016 21.3 0.1 3.1 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF102454 - 3.1e-10 40.3 2.1 5.2e-10 39.6 2.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF102454 - 5.9e-10 38.0 5.0 0.00047 19.5 0.2 3.0 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF102454 - 0.0013 18.5 3.3 0.0013 18.5 3.3 2.3 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF102454 - 0.0042 16.5 3.1 0.1 12.1 0.7 2.7 2 0 0 2 2 2 1 EF hand EF-hand_9 PF14658.6 ORF102454 - 0.014 15.7 0.1 0.035 14.4 0.0 1.7 2 0 0 2 2 2 0 EF-hand domain KIAA1430 PF13879.6 ORF101193 - 0.021 15.6 11.4 0.33 11.7 11.4 2.2 1 1 0 1 1 1 0 KIAA1430 homologue ROKNT PF08067.11 ORF101193 - 0.069 13.4 0.6 0.25 11.7 0.6 1.9 1 0 0 1 1 1 0 ROKNT (NUC014) domain Sterol-sensing PF12349.8 ORF100931 - 0.017 14.9 0.3 0.04 13.7 0.3 1.5 1 1 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation PI3_PI4_kinase PF00454.27 ORF100825 - 7.3e-07 29.2 0.1 1e-06 28.8 0.1 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF1647 PF07801.11 NODE_48401_length_391_cov_1.519663_g40525_i0forward_frame_1 - 0.015 15.0 0.3 0.019 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1647) DUF3328 PF11807.8 NODE_48401_length_391_cov_1.519663_g40525_i0forward_frame_1 - 0.12 12.1 0.6 0.18 11.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) ATP-synt_8 PF00895.20 NODE_48401_length_391_cov_1.519663_g40525_i0forward_frame_1 - 0.33 11.4 3.6 0.25 11.8 1.4 2.0 2 0 0 2 2 2 0 ATP synthase protein 8 DUF2776 PF10951.8 NODE_48399_length_391_cov_1.660112_g40523_i0forward_frame_1 - 2.2e-31 109.4 4.0 2.8e-31 109.1 4.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2776) B2-adapt-app_C PF09066.10 NODE_48391_length_391_cov_2.252809_g40515_i0reverse_frame_1 - 0.0041 17.2 0.5 0.0053 16.8 0.5 1.2 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain ketoacyl-synt PF00109.26 NODE_48390_length_391_cov_2.325843_g40514_i0reverse_frame_1 - 7.2e-16 58.5 0.0 8.4e-16 58.3 0.0 1.1 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Toxin_15 PF07906.13 NODE_48386_length_391_cov_2.530899_g40510_i0forward_frame_1 - 6e-48 163.8 0.0 6.5e-48 163.7 0.0 1.0 1 0 0 1 1 1 1 ShET2 enterotoxin, N-terminal region Lamprin PF06403.11 NODE_48381_length_391_cov_3.143258_g40505_i0forward_frame_1 - 1.7 8.6 13.2 4.7 7.2 13.3 1.6 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_48372_length_391_cov_10.491573_g40496_i0reverse_frame_1 - 0.036 14.0 12.9 0.46 10.4 1.3 3.0 1 1 2 3 3 3 0 Lamprin DUF997 PF06196.12 NODE_48361_length_391_cov_80.483146_g40485_i0forward_frame_1 - 1.9 8.5 8.4 5.3 7.1 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF997) Beta_helix PF13229.6 NODE_48351_length_391_cov_110.592697_g40475_i0forward_frame_1 - 0.0005 19.9 1.6 0.00067 19.5 1.6 1.2 1 0 0 1 1 1 1 Right handed beta helix region DGF-1_5 PF11038.8 NODE_48351_length_391_cov_110.592697_g40475_i0forward_frame_1 - 0.072 12.4 0.3 0.093 12.1 0.3 1.1 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 zf-C2H2 PF00096.26 NODE_48342_length_391_cov_159.898876_g40466_i0reverse_frame_1 - 2e-10 40.5 11.8 1.6e-06 28.3 0.5 3.8 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_48342_length_391_cov_159.898876_g40466_i0reverse_frame_1 - 3.7e-10 39.8 7.9 1.2e-05 25.5 0.4 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_48342_length_391_cov_159.898876_g40466_i0reverse_frame_1 - 0.00011 22.7 14.5 0.0006 20.4 0.3 3.7 4 0 0 4 4 4 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 NODE_48342_length_391_cov_159.898876_g40466_i0reverse_frame_1 - 0.0023 17.6 2.5 0.0036 17.0 0.8 2.2 3 0 0 3 3 3 1 zinc-finger C2H2-type zf-C2HC_2 PF13913.6 NODE_48342_length_391_cov_159.898876_g40466_i0reverse_frame_1 - 0.049 13.5 2.6 0.16 11.9 1.4 2.6 2 1 0 2 2 2 0 zinc-finger of a C2HC-type zf-C2H2_3rep PF18868.1 NODE_48342_length_391_cov_159.898876_g40466_i0reverse_frame_1 - 0.25 12.0 5.7 6.7 7.4 1.0 2.1 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats Ribosomal_L35Ae PF01247.18 NODE_48333_length_391_cov_549.446629_g40458_i0forward_frame_1 - 2.2e-35 120.7 3.0 3.5e-35 120.0 3.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L35Ae Dynein_light PF01221.18 NODE_48331_length_391_cov_1621.949438_g40456_i0reverse_frame_1 - 2.5e-07 30.9 1.1 4.5e-07 30.1 0.4 1.7 2 0 0 2 2 2 1 Dynein light chain type 1 Thiolase_C PF02803.18 NODE_48329_length_391_cov_3673.390449_g40455_i0forward_frame_1 - 0.17 11.5 1.0 0.25 11.0 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain Terminase_6 PF03237.15 NODE_48326_length_392_cov_1.523810_g40452_i0reverse_frame_1 - 0.016 14.9 0.0 0.02 14.5 0.0 1.1 1 0 0 1 1 1 0 Terminase-like family 7tm_3 PF00003.22 NODE_48325_length_392_cov_1.565826_g40451_i0reverse_frame_1 - 0.0061 16.3 2.1 0.0079 16.0 2.1 1.2 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR ASF1_hist_chap PF04729.13 NODE_48325_length_392_cov_1.565826_g40451_i0forward_frame_1 - 1.2e-27 96.8 0.1 1.4e-27 96.6 0.1 1.1 1 0 0 1 1 1 1 ASF1 like histone chaperone Shisa PF13908.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.0048 17.2 0.0 0.0083 16.4 0.0 1.4 1 1 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF4834 PF16118.5 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.0059 17.5 1.3 0.0095 16.9 1.3 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4834) Piezo_RRas_bdg PF12166.8 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.017 14.4 0.1 0.021 14.2 0.1 1.1 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain SARAF PF06682.12 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.024 14.3 0.0 0.03 14.0 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis TMEM154 PF15102.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.025 14.5 0.2 0.025 14.5 0.2 1.8 1 1 0 2 2 2 0 TMEM154 protein family EphA2_TM PF14575.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.036 14.9 1.0 0.091 13.7 1.0 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Serinc PF03348.15 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.041 12.8 0.1 0.048 12.6 0.1 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) SCIMP PF15050.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.041 14.3 0.2 0.054 13.9 0.2 1.2 1 0 0 1 1 1 0 SCIMP protein TMEMspv1-c74-12 PF11044.8 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.056 13.4 2.0 0.12 12.3 2.0 1.5 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Comm PF15957.5 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.11 12.8 1.9 0.2 12.0 1.9 1.5 1 1 0 1 1 1 0 Commissureless LRR19-TM PF15176.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.38 10.8 8.8 1.9 8.5 8.4 2.2 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Baculo_11_kDa PF06143.11 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.74 9.4 5.5 0.1 12.2 0.9 1.9 2 0 0 2 2 2 0 Baculovirus 11 kDa family Bacteriocin_II PF01721.18 NODE_48321_length_392_cov_1.792717_g40447_i0forward_frame_1 - 0.057 13.5 0.0 0.098 12.8 0.0 1.4 1 0 0 1 1 1 0 Class II bacteriocin XAF1_C PF18608.1 NODE_48313_length_392_cov_2.501401_g40439_i0forward_frame_1 - 0.022 14.3 0.0 0.042 13.4 0.0 1.5 1 0 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain RNA_pol_Rbc25 PF08292.12 NODE_48311_length_392_cov_2.616246_g40437_i0forward_frame_1 - 0.15 12.3 1.2 0.17 12.1 1.2 1.2 1 0 0 1 1 1 0 RNA polymerase III subunit Rpc25 ParB PF08775.10 NODE_48311_length_392_cov_2.616246_g40437_i0forward_frame_1 - 0.18 12.3 5.4 0.21 12.0 5.4 1.0 1 0 0 1 1 1 0 ParB family DUF735 PF05246.11 NODE_48310_length_392_cov_2.624650_g40436_i0reverse_frame_1 - 0.015 15.3 0.6 0.017 15.1 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF735) TTL PF03133.15 NODE_48308_length_392_cov_3.114846_g40434_i0reverse_frame_1 - 4.7e-26 91.6 0.3 5.3e-26 91.4 0.3 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Atg14 PF10186.9 NODE_48308_length_392_cov_3.114846_g40434_i0reverse_frame_1 - 0.041 13.0 0.0 0.041 13.0 0.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Clp_N PF02861.20 NODE_48308_length_392_cov_3.114846_g40434_i0reverse_frame_1 - 0.044 13.9 0.0 0.069 13.3 0.0 1.3 1 0 0 1 1 1 0 Clp amino terminal domain, pathogenicity island component Presenilin PF01080.17 NODE_48301_length_392_cov_19.240896_g40427_i0forward_frame_1 - 0.12 11.2 2.5 0.14 10.9 2.5 1.0 1 0 0 1 1 1 0 Presenilin AIF_C PF14721.6 NODE_48301_length_392_cov_19.240896_g40427_i0forward_frame_1 - 0.5 10.7 12.7 14 6.1 12.7 2.1 1 1 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term Herpes_UL25 PF01499.16 NODE_48297_length_392_cov_58.983193_g40423_i0forward_frame_1 - 0.021 13.4 6.5 0.027 13.0 6.5 1.0 1 0 0 1 1 1 0 Herpesvirus UL25 family IF-2B PF01008.17 NODE_48297_length_392_cov_58.983193_g40423_i0forward_frame_1 - 0.064 12.5 1.5 0.072 12.3 1.5 1.1 1 0 0 1 1 1 0 Initiation factor 2 subunit family Iron_permease PF04120.12 NODE_48297_length_392_cov_58.983193_g40423_i0forward_frame_1 - 7.4 6.4 6.2 11 5.8 6.2 1.4 1 1 0 1 1 1 0 Low affinity iron permease PAN_4 PF14295.6 NODE_48291_length_392_cov_78.266106_g40417_i0forward_frame_1 - 1.4 8.9 5.0 10 6.1 0.2 2.3 2 0 0 2 2 2 0 PAN domain RCC1_2 PF13540.6 NODE_48286_length_392_cov_106.344538_g39939_i1forward_frame_1 - 0.00035 20.3 2.0 0.047 13.5 0.1 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat FNIP PF05725.12 NODE_48285_length_392_cov_109.431373_g40412_i0forward_frame_1 - 0.01 16.0 0.4 0.017 15.3 0.4 1.3 1 0 0 1 1 1 0 FNIP Repeat ubiquitin PF00240.23 NODE_48285_length_392_cov_109.431373_g40412_i0forward_frame_1 - 0.028 14.1 0.0 0.16 11.8 0.0 2.1 2 0 0 2 2 2 0 Ubiquitin family DUF1874 PF08960.10 NODE_48285_length_392_cov_109.431373_g40412_i0forward_frame_1 - 0.14 12.3 0.0 0.23 11.6 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1874) MAP17 PF15807.5 NODE_48282_length_392_cov_121.039216_g40409_i0forward_frame_1 - 0.0012 19.1 1.6 0.0019 18.4 1.6 1.5 1 1 0 1 1 1 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 FixS PF03597.15 NODE_48282_length_392_cov_121.039216_g40409_i0forward_frame_1 - 0.0074 16.0 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Cytochrome oxidase maturation protein cbb3-type DUF4307 PF14155.6 NODE_48282_length_392_cov_121.039216_g40409_i0forward_frame_1 - 0.081 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF3976 PF13121.6 NODE_48282_length_392_cov_121.039216_g40409_i0forward_frame_1 - 0.097 12.8 1.2 0.17 12.1 1.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3976) DUF2236 PF09995.9 NODE_48279_length_392_cov_125.221289_g40406_i0reverse_frame_1 - 0.062 13.5 0.1 0.069 13.3 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2236) Hepatitis_core PF00906.20 NODE_48279_length_392_cov_125.221289_g40406_i0reverse_frame_1 - 0.28 10.7 3.6 0.31 10.6 3.6 1.1 1 0 0 1 1 1 0 Hepatitis core antigen Helicase_C PF00271.31 NODE_48265_length_392_cov_270.865546_g40392_i0forward_frame_1 - 0.0069 16.7 0.0 0.01 16.2 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DUF5410 PF17422.2 NODE_48255_length_393_cov_1.837989_g40383_i0reverse_frame_1 - 0.23 10.7 3.1 0.43 9.8 3.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5410) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks174.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks174.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks174.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks174.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- V-set PF07686.17 NODE_48248_length_393_cov_2.458101_g40376_i0reverse_frame_1 - 1.1 9.5 5.2 0.33 11.1 2.3 1.6 2 0 0 2 2 2 0 Immunoglobulin V-set domain SBP_bac_5 PF00496.22 NODE_48247_length_393_cov_2.477654_g40375_i0forward_frame_1 - 3.8e-26 92.0 0.1 4.2e-26 91.8 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle CAF1-p150_C2 PF15539.6 NODE_48246_length_393_cov_2.511173_g40374_i0reverse_frame_1 - 0.049 13.1 0.1 0.063 12.7 0.1 1.1 1 0 0 1 1 1 0 CAF1 complex subunit p150, region binding to CAF1-p60 at C-term DUF2225 PF09986.9 NODE_48241_length_393_cov_3.053073_g40369_i0forward_frame_1 - 0.014 15.2 0.4 0.016 14.9 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) Blt1_C PF17183.4 NODE_48240_length_393_cov_3.251397_g40368_i0reverse_frame_1 - 0.11 12.2 0.3 0.24 11.1 0.0 1.7 2 0 0 2 2 2 0 Get5 carboxyl domain SLBB PF10531.9 NODE_48236_length_393_cov_3.575419_g40364_i0reverse_frame_1 - 0.07 13.0 0.0 0.16 11.8 0.0 1.6 2 0 0 2 2 2 0 SLBB domain YvrJ PF12841.7 NODE_48233_length_393_cov_17.754190_g40361_i0reverse_frame_1 - 0.14 11.7 1.4 0.18 11.3 0.1 1.9 2 0 0 2 2 2 0 YvrJ protein family Pkinase PF00069.25 NODE_48225_length_393_cov_70.555866_g40353_i0forward_frame_1 - 2.7e-06 27.0 0.0 3.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_48225_length_393_cov_70.555866_g40353_i0forward_frame_1 - 0.00016 21.0 0.0 0.0002 20.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Med13_N PF11597.8 NODE_48217_length_393_cov_81.703911_g40345_i0reverse_frame_1 - 0.012 15.0 0.3 0.015 14.7 0.3 1.1 1 0 0 1 1 1 0 Mediator complex subunit 13 N-terminal DUF515 PF04415.12 NODE_48217_length_393_cov_81.703911_g40345_i0reverse_frame_1 - 0.77 8.1 2.1 0.99 7.7 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) EIN3 PF04873.13 NODE_48217_length_393_cov_81.703911_g40345_i0forward_frame_1 - 1.1 8.5 5.4 1.4 8.2 5.4 1.3 1 1 0 1 1 1 0 Ethylene insensitive 3 DUF2768 PF10966.8 NODE_48214_length_393_cov_87.248603_g40342_i0forward_frame_1 - 8.1 7.0 10.7 2 8.9 6.6 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2768) Ank PF00023.30 NODE_48213_length_393_cov_90.162011_g40341_i0forward_frame_1 - 0.00023 21.5 0.3 0.00087 19.6 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 NODE_48213_length_393_cov_90.162011_g40341_i0forward_frame_1 - 0.00057 20.4 0.0 0.0021 18.6 0.0 1.9 3 0 0 3 3 3 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_48213_length_393_cov_90.162011_g40341_i0forward_frame_1 - 0.0032 17.8 0.0 0.0067 16.7 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_48213_length_393_cov_90.162011_g40341_i0forward_frame_1 - 0.017 15.6 0.0 0.044 14.3 0.0 1.7 1 0 0 1 1 1 0 Ankyrin repeat Ank_4 PF13637.6 NODE_48213_length_393_cov_90.162011_g40341_i0forward_frame_1 - 0.028 15.0 0.0 0.067 13.8 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeats (many copies) RNase_PH_C PF03725.15 NODE_48210_length_393_cov_110.212291_g40338_i0forward_frame_1 - 3e-08 33.5 0.2 4.9e-08 32.9 0.2 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Tubulin_2 PF13809.6 NODE_48205_length_393_cov_123.243017_g40333_i0forward_frame_1 - 0.16 11.2 0.5 0.19 10.9 0.5 1.0 1 0 0 1 1 1 0 Tubulin like Cloacin_immun PF03513.14 NODE_48199_length_393_cov_151.916201_g40327_i0reverse_frame_1 - 0.003 17.8 1.1 0.29 11.5 0.2 2.2 1 1 1 2 2 2 2 Cloacin immunity protein YqfQ PF14181.6 NODE_48193_length_393_cov_260.980447_g40321_i0reverse_frame_1 - 0.041 14.1 0.1 0.056 13.6 0.1 1.1 1 0 0 1 1 1 0 YqfQ-like protein KdpA PF03814.15 NODE_48193_length_393_cov_260.980447_g40321_i0forward_frame_1 - 0.064 11.4 0.0 0.065 11.4 0.0 1.1 1 0 0 1 1 1 0 Potassium-transporting ATPase A subunit STT3_PglB_C PF18527.1 NODE_48179_length_394_cov_1.161560_g40308_i0forward_frame_3 - 0.0013 18.7 0.4 0.0036 17.4 0.4 1.7 1 0 0 1 1 1 1 STT3/PglB C-terminal beta-barrel domain DUF3325 PF11804.8 NODE_48174_length_394_cov_1.746518_g40303_i0reverse_frame_2 - 0.041 14.0 0.2 0.06 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) PPDFL PF15060.6 NODE_48174_length_394_cov_1.746518_g40303_i0forward_frame_2 - 0.086 13.4 0.7 0.16 12.5 0.4 1.5 1 1 1 2 2 2 0 Differentiation and proliferation regulator Trypan_PARP PF05887.11 NODE_48173_length_394_cov_1.857939_g40302_i0forward_frame_3 - 5.4 7.0 9.9 7.7 6.5 9.9 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) MCPVI PF02993.14 NODE_48173_length_394_cov_1.857939_g40302_i0forward_frame_2 - 0.061 13.2 4.7 0.076 12.8 4.7 1.0 1 0 0 1 1 1 0 Minor capsid protein VI Cytochrom_C PF00034.21 NODE_48173_length_394_cov_1.857939_g40302_i0forward_frame_2 - 0.48 11.6 2.9 0.62 11.3 2.9 1.3 1 1 0 1 1 1 0 Cytochrome c IHO1 PF15771.5 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_2 - 2.8 6.6 11.7 3.2 6.4 11.7 1.0 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 Shadoo PF14999.6 NODE_48172_length_394_cov_2.061281_g40301_i0forward_frame_3 - 0.029 14.5 6.6 0.039 14.0 6.6 1.2 1 0 0 1 1 1 0 Shadow of prion protein, neuroprotective DRE2_N PF16803.5 NODE_48171_length_394_cov_2.295265_g40300_i0forward_frame_2 - 0.021 15.1 0.0 0.046 14.0 0.0 1.5 2 0 0 2 2 2 0 Fe-S cluster assembly protein DRE2 N-terminus VD10_N PF08476.10 NODE_48170_length_394_cov_2.389972_g40299_i0reverse_frame_2 - 0.071 12.8 0.1 0.14 11.9 0.1 1.4 1 0 0 1 1 1 0 Viral D10 N-terminal Ribosomal_L41 PF05162.13 NODE_48165_length_394_cov_2.813370_g40294_i0reverse_frame_2 - 0.052 13.6 0.3 0.096 12.8 0.3 1.3 1 0 0 1 1 1 0 Ribosomal protein L41 Herpes_gE PF02480.16 NODE_48164_length_394_cov_2.885794_g40293_i0forward_frame_3 - 0.083 11.6 0.1 0.11 11.3 0.1 1.1 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E Vps55 PF04133.14 NODE_48162_length_394_cov_3.364903_g40291_i0forward_frame_3 - 0.017 15.1 0.4 0.025 14.6 0.4 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting 55 Plasmid_RAQPRD PF09686.10 NODE_48159_length_394_cov_4.415042_g40288_i0reverse_frame_2 - 0.12 12.6 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Plasmid protein of unknown function (Plasmid_RAQPRD) Lamprin PF06403.11 NODE_48159_length_394_cov_4.415042_g40288_i0forward_frame_3 - 0.26 11.3 1.1 0.49 10.3 1.1 1.4 1 0 0 1 1 1 0 Lamprin DUF2098 PF09871.9 NODE_48157_length_394_cov_10.676880_g40286_i0reverse_frame_2 - 1.5 9.2 4.7 0.97 9.8 0.4 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2098) RabGAP-TBC PF00566.18 NODE_48150_length_394_cov_69.646240_g40279_i0reverse_frame_3 - 0.0027 17.4 0.3 0.0052 16.5 0.1 1.6 2 0 0 2 2 2 1 Rab-GTPase-TBC domain CDC37_C PF08564.10 NODE_48150_length_394_cov_69.646240_g40279_i0reverse_frame_3 - 0.11 12.7 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 Cdc37 C terminal domain Ras PF00071.22 NODE_48146_length_394_cov_77.955432_g40275_i0reverse_frame_2 - 0.16 11.6 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Ras family DUF2567 PF10821.8 NODE_48143_length_394_cov_87.785515_g40272_i0reverse_frame_3 - 0.15 12.1 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2567) zf-CCHC PF00098.23 NODE_48141_length_394_cov_94.362117_g40270_i0reverse_frame_2 - 0.019 15.0 3.6 0.019 15.0 3.6 2.0 2 0 0 2 2 2 0 Zinc knuckle zf-CCHC_4 PF14392.6 NODE_48141_length_394_cov_94.362117_g40270_i0reverse_frame_2 - 0.15 11.9 1.9 0.27 11.0 1.9 1.4 1 0 0 1 1 1 0 Zinc knuckle DEC-1_N PF04625.13 NODE_48137_length_394_cov_119.988858_g40266_i0forward_frame_3 - 0.12 11.4 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DUF4371 PF14291.6 NODE_48130_length_394_cov_249.643454_g40259_i0reverse_frame_3 - 0.0085 15.8 0.0 0.01 15.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4371) Papo_T_antigen PF02380.15 NODE_48130_length_394_cov_249.643454_g40259_i0forward_frame_2 - 0.022 14.9 0.1 0.033 14.3 0.1 1.3 1 0 0 1 1 1 0 T-antigen specific domain HMG_box PF00505.19 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 5.5e-14 52.3 2.9 7.5e-14 51.9 2.9 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 1.4e-10 41.6 4.4 2.1e-10 41.0 4.4 1.3 1 0 0 1 1 1 1 HMG-box domain Protamine_like PF06382.11 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 0.059 13.5 2.8 0.094 12.9 2.7 1.4 1 1 0 1 1 1 0 Protamine and protamine like Metal_resist PF13801.6 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 0.22 11.7 3.2 0.35 11.1 3.1 1.5 1 1 0 1 1 1 0 Heavy-metal resistance Ribosomal_L6e_N PF03868.15 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 1.2 9.5 5.8 0.45 10.8 1.1 2.5 2 1 1 3 3 3 0 Ribosomal protein L6, N-terminal domain K_channel_TID PF07941.11 NODE_48112_length_395_cov_2.188889_g40241_i0reverse_frame_3 - 1.2 9.6 17.8 0.12 12.9 12.1 2.1 2 0 0 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain Cas9_PI2 PF18070.1 NODE_48110_length_395_cov_2.538889_g31065_i2forward_frame_3 - 0.01 16.5 0.3 0.035 14.8 0.3 1.9 1 0 0 1 1 1 0 CRISPR-Cas9 PI domain CSN5_C PF18323.1 NODE_48110_length_395_cov_2.538889_g31065_i2forward_frame_3 - 0.23 12.4 3.8 0.36 11.8 3.8 1.4 1 1 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain Presenilin PF01080.17 NODE_48110_length_395_cov_2.538889_g31065_i2forward_frame_3 - 1.6 7.4 3.7 1.9 7.2 3.7 1.0 1 0 0 1 1 1 0 Presenilin CarbpepA_inh PF02977.15 NODE_48108_length_395_cov_3.008333_g40238_i0forward_frame_3 - 0.033 14.0 0.7 0.033 14.0 0.7 1.8 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor NAD_binding_2 PF03446.15 NODE_48107_length_395_cov_3.205556_g40237_i0forward_frame_2 - 8.2e-10 39.1 0.1 1e-09 38.8 0.1 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 NODE_48107_length_395_cov_3.205556_g40237_i0forward_frame_2 - 0.013 16.1 0.1 0.019 15.5 0.1 1.3 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DUF2838 PF10998.8 NODE_48104_length_395_cov_11.452778_g40234_i0reverse_frame_3 - 0.035 14.4 0.8 0.046 14.0 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) STOP PF05217.12 NODE_48103_length_395_cov_20.838889_g40233_i0forward_frame_3 - 0.34 11.2 3.6 0.57 10.5 3.6 1.3 1 0 0 1 1 1 0 STOP protein Ribosomal_S27 PF01599.19 NODE_48102_length_395_cov_22.750000_g40232_i0forward_frame_3 - 0.099 12.8 0.2 0.18 12.0 0.2 1.4 1 0 0 1 1 1 0 Ribosomal protein S27a RCDG1 PF15725.5 NODE_48101_length_395_cov_24.350000_g40231_i0reverse_frame_2 - 0.77 10.2 5.5 0.31 11.5 1.4 2.0 2 0 0 2 2 2 0 Renal cancer differentiation gene 1 protein DIRP PF06584.13 NODE_48092_length_395_cov_63.208333_g40222_i0reverse_frame_3 - 0.014 15.6 0.1 0.022 15.0 0.1 1.4 1 0 0 1 1 1 0 DIRP OKR_DC_1_C PF03711.15 NODE_48092_length_395_cov_63.208333_g40222_i0reverse_frame_3 - 0.043 14.1 0.1 0.058 13.7 0.1 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, C-terminal domain Ribos_L4_asso_C PF14374.6 NODE_48088_length_395_cov_71.183333_g40218_i0forward_frame_2 - 0.028 14.5 3.6 0.044 13.8 0.5 2.3 2 0 0 2 2 2 0 60S ribosomal protein L4 C-terminal domain UreE_N PF02814.15 NODE_48085_length_395_cov_78.652778_g40215_i0forward_frame_3 - 0.12 12.0 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain HemN_C PF06969.16 NODE_48085_length_395_cov_78.652778_g40215_i0forward_frame_2 - 0.04 14.0 0.6 0.085 12.9 0.1 1.8 2 0 0 2 2 2 0 HemN C-terminal domain PP2C PF00481.21 NODE_48083_length_395_cov_83.444444_g40213_i0reverse_frame_2 - 9.2e-12 45.1 0.0 1.1e-11 44.9 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C tRNA_lig_kinase PF08303.11 NODE_48082_length_395_cov_84.480556_g40212_i0reverse_frame_3 - 0.12 12.4 3.9 1 9.5 0.6 2.1 1 1 1 2 2 2 0 tRNA ligase kinase domain O-antigen_lig PF13425.6 NODE_48082_length_395_cov_84.480556_g40212_i0reverse_frame_3 - 3.2 6.5 5.5 3.4 6.3 5.5 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Tho2 PF11262.8 NODE_48082_length_395_cov_84.480556_g40212_i0reverse_frame_3 - 4.8 6.3 9.4 6.2 5.9 9.4 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Vfa1 PF08432.10 NODE_48082_length_395_cov_84.480556_g40212_i0reverse_frame_3 - 8.4 6.7 11.2 10 6.4 11.2 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Guanylin PF02058.15 NODE_48081_length_395_cov_85.158333_g40211_i0forward_frame_2 - 1.2 9.7 3.5 14 6.3 0.5 2.2 1 1 1 2 2 2 0 Guanylin precursor zf-C6H2 PF15801.5 NODE_48079_length_395_cov_95.708333_g40209_i0reverse_frame_2 - 0.39 11.1 1.9 6 7.3 0.0 2.2 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding GXGXG PF01493.19 NODE_48076_length_395_cov_108.694444_g40206_i0reverse_frame_3 - 0.26 10.8 0.0 0.37 10.3 0.0 1.1 1 0 0 1 1 1 0 GXGXG motif GTP_cyclohydro2 PF00925.20 NODE_48076_length_395_cov_108.694444_g40206_i0forward_frame_2 - 0.057 13.0 0.0 0.066 12.8 0.0 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase II AalphaY_MDB PF04611.12 NODE_48076_length_395_cov_108.694444_g40206_i0forward_frame_2 - 0.15 12.1 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Mating type protein A alpha Y mating type dependent binding region DUF3408 PF11888.8 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_3 - 0.035 14.2 7.0 0.049 13.8 7.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) FYVE PF01363.21 NODE_48066_length_395_cov_219.880556_g40197_i0reverse_frame_3 - 0.033 14.3 8.2 0.044 13.9 8.2 1.3 1 0 0 1 1 1 0 FYVE zinc finger PHD PF00628.29 NODE_48066_length_395_cov_219.880556_g40197_i0reverse_frame_3 - 0.43 10.5 11.2 0.2 11.6 5.2 2.5 2 1 0 2 2 2 0 PHD-finger Kisspeptin PF15152.6 NODE_48063_length_395_cov_257.952778_g40194_i0forward_frame_2 - 1.7 9.5 6.2 0.89 10.4 3.2 2.1 1 1 2 3 3 3 0 Kisspeptin DUF5540 PF17694.1 NODE_48057_length_395_cov_9807.986111_g40192_i0reverse_frame_2 - 0.29 11.7 6.3 8.2 7.0 1.4 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5540) SecG PF03840.14 NODE_48056_length_395_cov_15143.102778_g40191_i0reverse_frame_3 - 0.038 14.1 1.1 0.068 13.3 1.1 1.4 1 0 0 1 1 1 0 Preprotein translocase SecG subunit Spc7 PF08317.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.7e-08 32.6 11.7 4.4e-08 32.4 11.7 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Atg14 PF10186.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.7e-06 25.4 8.4 8.1e-06 25.1 8.4 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 ATG16 PF08614.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.2e-05 25.7 8.4 1.5e-05 25.3 8.4 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) HAP1_N PF04849.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.7e-05 24.2 12.1 2.2e-05 23.8 10.5 1.7 1 1 0 1 1 1 1 HAP1 N-terminal conserved region AAA_13 PF13166.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.7e-05 23.0 9.7 3.4e-05 22.7 9.7 1.1 1 0 0 1 1 1 1 AAA domain Fez1 PF06818.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6e-05 23.6 7.1 7.8e-05 23.2 7.1 1.1 1 0 0 1 1 1 1 Fez1 SlyX PF04102.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 7.7e-05 23.2 16.4 0.0086 16.7 1.2 3.1 1 1 2 3 3 3 2 SlyX TMF_DNA_bd PF12329.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00012 22.0 34.6 0.0023 17.9 13.8 2.8 1 1 2 3 3 3 2 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00013 21.6 20.3 0.00021 21.0 5.8 3.1 1 1 2 3 3 3 1 Septum formation initiator PKcGMP_CC PF16808.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00036 20.3 24.0 0.0004 20.2 2.8 4.0 4 1 0 4 4 3 1 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF641 PF04859.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00037 20.8 12.6 0.029 14.7 6.5 2.2 1 1 1 2 2 2 2 Plant protein of unknown function (DUF641) Prominin PF05478.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0004 18.5 7.7 0.0013 16.8 7.8 1.6 1 1 0 1 1 1 1 Prominin TMF_TATA_bd PF12325.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0004 20.6 27.8 0.0031 17.7 9.1 2.0 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding Tropomyosin_1 PF12718.7 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0005 20.2 10.5 0.00079 19.6 10.5 1.4 1 0 0 1 1 1 1 Tropomyosin like UPF0242 PF06785.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00077 19.6 18.1 0.049 13.7 7.6 2.1 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0242) N-terminus DUF3829 PF12889.7 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00081 19.0 6.6 0.0011 18.5 6.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3829) ZapB PF06005.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00092 19.6 13.9 0.00092 19.6 13.9 2.2 1 1 1 2 2 2 1 Cell division protein ZapB DUF5482 PF17579.2 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.001 18.9 1.1 0.0013 18.6 0.5 1.4 1 1 0 1 1 1 1 Family of unknown function (DUF5482) HOOK PF05622.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0011 17.2 9.3 0.0014 16.9 9.3 1.1 1 0 0 1 1 1 1 HOOK protein GAS PF13851.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0011 18.3 7.6 0.0011 18.3 7.6 2.0 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding HMMR_N PF15905.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0013 18.3 14.5 0.0016 18.0 14.5 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal EzrA PF06160.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0014 16.9 11.0 0.0017 16.6 11.0 1.1 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA BRE1 PF08647.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0015 18.6 14.1 0.0016 18.4 11.7 2.0 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase SHE3 PF17078.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0018 18.1 6.0 0.0021 17.8 6.0 1.2 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Fib_alpha PF08702.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0019 18.4 14.4 0.03 14.5 6.6 2.2 1 1 1 2 2 2 1 Fibrinogen alpha/beta chain family Spectrin PF00435.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0022 18.5 10.8 0.0028 18.1 8.8 1.9 1 1 1 2 2 2 1 Spectrin repeat TPR_MLP1_2 PF07926.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0022 18.0 13.3 0.0041 17.2 13.3 1.4 1 1 0 1 1 1 1 TPR/MLP1/MLP2-like protein DUF812 PF05667.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0023 16.9 9.8 0.0028 16.6 9.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Taxilin PF09728.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0024 17.1 7.1 0.003 16.8 7.1 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein TMPIT PF07851.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0024 17.2 6.2 0.0028 17.0 6.2 1.1 1 0 0 1 1 1 1 TMPIT-like protein TolA_bind_tri PF16331.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0026 17.8 15.2 0.0092 16.0 7.2 3.0 1 1 2 3 3 3 1 TolA binding protein trimerisation GrpE PF01025.19 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0029 17.3 12.1 0.011 15.4 12.1 1.9 1 1 0 1 1 1 1 GrpE ADIP PF11559.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0031 17.6 9.9 0.0031 17.6 9.9 1.6 1 1 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF724 PF05266.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0033 17.3 7.6 0.0038 17.1 7.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF724) CENP-F_leu_zip PF10473.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0034 17.4 15.5 0.0098 15.9 15.5 1.6 1 1 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ALIX_LYPXL_bnd PF13949.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0036 16.6 4.9 0.0044 16.3 4.9 1.1 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV LRRFIP PF09738.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0038 16.8 8.1 0.0044 16.6 8.1 1.2 1 0 0 1 1 1 1 LRRFIP family APC_N_CC PF16689.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0052 16.8 5.1 0.14 12.2 0.8 3.0 2 1 1 3 3 3 1 Coiled-coil N-terminus of APC, dimerisation domain Laminin_II PF06009.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0061 16.6 12.1 0.021 14.9 9.9 2.0 1 1 1 2 2 2 1 Laminin Domain II BORCS7 PF16088.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0065 16.7 3.5 0.0087 16.3 2.3 1.8 1 1 1 2 2 1 1 BLOC-1-related complex sub-unit 7 DUF4200 PF13863.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0067 16.8 21.5 0.017 15.5 6.2 3.0 1 1 2 3 3 3 2 Domain of unknown function (DUF4200) DUF3584 PF12128.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0069 14.0 7.5 0.0078 13.8 7.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF3552 PF12072.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0073 15.8 10.9 0.01 15.3 10.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) DUF745 PF05335.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0083 15.9 4.4 0.012 15.4 4.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF745) Cnn_1N PF07989.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.009 16.1 14.6 0.009 16.1 14.6 2.0 1 1 2 3 3 2 1 Centrosomin N-terminal motif 1 XLF PF09302.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0093 16.2 8.6 0.7 10.0 0.4 2.1 1 1 1 2 2 2 2 XLF-Cernunnos, XRcc4-like factor, NHEJ component PI3K_P85_iSH2 PF16454.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0097 15.5 11.3 0.016 14.8 11.3 1.4 1 1 0 1 1 1 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain HemX PF04375.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0098 15.2 7.2 0.013 14.8 7.2 1.2 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase DUF4239 PF14023.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.01 15.6 2.3 0.013 15.3 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) Baculo_PEP_C PF04513.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.011 15.8 10.1 0.094 12.8 10.1 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Rab5-bind PF09311.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.011 15.1 11.6 0.013 14.9 11.6 1.1 1 0 0 1 1 1 0 Rabaptin-like protein DUF1664 PF07889.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.011 15.7 10.4 0.062 13.3 9.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF16 PF01519.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.012 16.1 13.2 0.095 13.2 13.2 2.1 1 1 0 1 1 1 0 Protein of unknown function DUF16 Helo_like_N PF17111.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.015 14.7 2.1 0.021 14.2 1.5 1.5 1 1 0 1 1 1 0 Fungal N-terminal domain of STAND proteins APG6_N PF17675.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.015 15.8 16.1 0.028 14.9 16.1 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region Tho2 PF11262.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.015 14.5 4.6 0.024 13.8 4.6 1.4 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Csm1_N PF18504.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.015 15.6 14.1 0.032 14.6 6.6 2.9 1 1 3 4 4 4 0 Csm1 N-terminal domain YkyA PF10368.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.018 14.7 15.1 0.027 14.1 14.9 1.4 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein DUF3450 PF11932.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.018 14.4 14.6 0.068 12.5 14.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FlaC_arch PF05377.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.018 15.4 14.4 0.11 13.0 9.0 3.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Alpha-2-MRAP_C PF06401.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.018 15.0 3.4 0.024 14.6 3.4 1.2 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain TACC_C PF05010.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.02 14.7 6.1 0.02 14.7 6.1 2.1 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal TBCC_N PF16752.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.02 15.3 7.6 0.059 13.8 7.6 1.7 1 1 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain DUF4201 PF13870.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.022 14.5 12.6 0.029 14.1 12.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) ERM PF00769.19 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.024 14.5 12.3 0.031 14.1 12.3 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family MCC-bdg_PDZ PF10506.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.027 14.5 1.0 0.027 14.5 1.0 2.1 2 1 0 2 2 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome NPV_P10 PF05531.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.027 14.9 11.7 15 6.1 11.7 2.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Filament PF00038.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.028 14.0 12.4 0.047 13.3 12.3 1.4 1 1 0 1 1 1 0 Intermediate filament protein MAD PF05557.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.028 12.8 11.1 0.034 12.5 11.1 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein FapA PF03961.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.031 12.9 10.3 0.037 12.6 10.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A CCCAP PF15964.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.032 12.6 7.4 0.035 12.4 7.4 1.1 1 0 0 1 1 1 0 Centrosomal colon cancer autoantigen protein family DUF4407 PF14362.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.032 13.6 8.7 0.079 12.3 8.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TraF_2 PF13729.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.035 13.5 1.3 0.042 13.2 1.3 1.1 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein CLZ PF16526.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.036 14.4 9.4 0.044 14.2 8.0 1.9 1 1 1 2 2 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels MPS2 PF17060.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.037 13.3 8.4 0.043 13.1 8.4 1.1 1 0 0 1 1 1 0 Monopolar spindle protein 2 Phage_GP20 PF06810.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.038 13.8 13.8 0.15 11.9 13.8 1.9 1 1 0 1 1 1 0 Phage minor structural protein GP20 Exonuc_VII_L PF02601.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.038 13.5 8.5 0.051 13.1 7.5 1.5 1 1 1 2 2 1 0 Exonuclease VII, large subunit Gp58 PF07902.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.04 12.2 2.5 0.046 12.0 2.5 1.1 1 0 0 1 1 1 0 gp58-like protein Tektin PF03148.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.043 12.6 11.0 0.07 11.9 11.0 1.4 1 0 0 1 1 1 0 Tektin family LXG PF04740.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.044 13.5 7.7 0.065 12.9 7.7 1.3 1 0 0 1 1 1 0 LXG domain of WXG superfamily DUF4527 PF15030.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.046 13.1 2.2 0.06 12.8 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) HIP1_clath_bdg PF16515.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.047 14.3 12.6 0.4 11.3 12.6 2.3 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4795 PF16043.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.048 13.3 12.4 3 7.4 12.4 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Phage_GPO PF05929.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.049 13.2 3.4 0.067 12.8 3.4 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Sec5 PF15469.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.054 13.3 4.3 0.081 12.7 4.3 1.4 1 0 0 1 1 1 0 Exocyst complex component Sec5 VGPC1_C PF16799.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.058 13.4 7.8 0.076 13.0 3.6 2.7 1 1 1 2 2 2 0 C-terminal membrane-localisation domain of ion-channel, VCN1 Baculo_F PF12259.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.058 11.9 4.6 0.069 11.7 4.6 1.1 1 0 0 1 1 1 0 Baculovirus F protein AKNA PF12443.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.06 14.0 4.3 0.062 13.9 1.8 2.2 1 1 1 2 2 1 0 AT-hook-containing transcription factor CC2-LZ PF16516.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.061 13.7 13.5 0.28 11.6 5.4 2.6 1 1 2 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator YPEB PF14620.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.061 12.7 3.4 0.068 12.5 3.4 1.1 1 0 0 1 1 1 0 YpeB sporulation DUF4763 PF15960.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.062 12.6 8.9 0.16 11.2 8.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4763) HrpB7 PF09486.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.064 13.6 8.4 0.1 13.0 8.2 1.5 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) End3 PF12761.7 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.066 13.4 5.7 0.11 12.6 5.7 1.4 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 Yuri_gagarin PF15934.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.068 13.0 7.9 2.6 7.8 3.8 2.1 1 1 1 2 2 2 0 Yuri gagarin Nup54 PF13874.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.07 13.2 6.0 0.025 14.7 3.1 1.6 1 1 1 2 2 1 0 Nucleoporin complex subunit 54 DUF4495 PF14906.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.073 12.1 0.0 0.083 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4495) Wtap PF17098.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.073 13.0 9.0 0.41 10.6 1.0 2.3 1 1 1 2 2 2 0 WTAP/Mum2p family Hormone_4 PF00220.17 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.076 13.0 0.8 0.17 11.9 0.8 1.5 1 0 0 1 1 1 0 Neurohypophysial hormones, N-terminal Domain Golgin_A5 PF09787.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.081 12.4 13.8 0.17 11.3 13.8 1.5 1 1 0 1 1 1 0 Golgin subfamily A member 5 DUF4446 PF14584.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.082 12.9 8.5 0.64 10.0 2.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) HR1 PF02185.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.082 13.0 10.0 0.13 12.4 1.9 2.6 1 1 1 2 2 2 0 Hr1 repeat BicD PF09730.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.087 11.2 11.2 0.096 11.1 11.2 1.0 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D KLRAQ PF10205.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.087 13.1 10.0 1.6 9.0 10.0 2.3 1 1 0 1 1 1 0 Predicted coiled-coil domain-containing protein COG5 PF10392.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.087 13.0 6.2 0.14 12.4 6.2 1.3 1 0 0 1 1 1 0 Golgi transport complex subunit 5 Corona_S2 PF01601.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.089 11.3 2.4 0.11 11.0 2.4 1.1 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein DUF3138 PF11336.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.091 11.4 0.0 0.096 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Lebercilin PF15619.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.092 12.4 14.0 0.42 10.2 14.0 2.2 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease HAUS6_N PF14661.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.1 12.1 4.3 0.14 11.8 4.3 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus BBP1_C PF15272.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.11 12.3 7.9 0.15 11.8 7.9 1.3 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal DUF948 PF06103.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.11 12.8 6.1 0.67 10.2 5.7 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Uso1_p115_C PF04871.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.11 12.8 9.4 0.072 13.5 7.6 1.5 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Prefoldin_2 PF01920.20 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.11 12.4 19.7 0.071 13.1 5.6 3.2 1 1 2 3 3 3 0 Prefoldin subunit Spc24 PF08286.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.7 10.6 0.55 10.5 10.6 2.1 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF2730 PF10805.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.5 8.0 0.17 12.0 4.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) MscS_porin PF12795.7 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 11.9 16.1 0.55 9.7 16.0 1.8 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain Phage_Mu_Gam PF07352.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.3 14.9 1 9.3 5.2 2.1 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein MCPsignal PF00015.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.2 7.5 0.17 11.7 7.5 1.3 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain LPP PF04728.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.8 4.9 0.8 10.1 2.3 2.9 1 1 1 2 2 2 0 Lipoprotein leucine-zipper Mod_r PF07200.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.13 12.4 10.7 0.25 11.5 10.7 1.5 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein DUF2203 PF09969.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.14 12.9 8.8 0.77 10.5 8.7 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) LMP PF04778.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.14 12.1 8.9 0.098 12.6 7.4 1.5 1 1 0 1 1 1 0 LMP repeated region Cep57_MT_bd PF06657.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.14 12.6 10.0 0.3 11.5 8.1 2.1 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 APG17 PF04108.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.15 11.1 7.3 0.25 10.4 7.3 1.5 1 1 0 1 1 1 0 Autophagy protein Apg17 CHDCT2 PF08074.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.17 12.1 3.1 0.22 11.7 3.1 1.1 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain Spc29 PF17082.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.17 11.7 10.6 0.69 9.7 10.2 1.9 1 1 0 1 1 1 0 Spindle Pole Component 29 BST2 PF16716.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.18 12.4 13.5 0.58 10.8 7.6 2.7 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 COG2 PF06148.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.18 11.9 7.3 0.8 9.8 7.3 1.9 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 HCMV_UL139 PF12507.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.19 12.1 4.3 0.84 10.0 4.2 2.2 1 1 0 1 1 1 0 Human Cytomegalovirus UL139 protein Cast PF10174.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.2 9.9 12.7 0.5 8.5 12.6 1.5 1 1 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone YabA PF06156.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.2 12.3 11.0 7.6 7.2 11.0 2.6 1 1 0 1 1 1 0 Initiation control protein YabA FliJ PF02050.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.21 11.8 12.7 0.43 10.8 12.7 1.5 1 1 0 1 1 1 0 Flagellar FliJ protein PspA_IM30 PF04012.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.21 11.2 13.9 0.12 11.9 9.6 2.0 1 1 1 2 2 2 0 PspA/IM30 family Med9 PF07544.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.21 11.7 17.4 0.6 10.2 9.6 2.9 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF2748 PF10871.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.22 10.1 5.5 0.19 10.3 4.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2748) Seryl_tRNA_N PF02403.22 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.22 11.8 15.5 0.47 10.7 13.7 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain zf-C4H2 PF10146.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.22 11.8 10.0 0.25 11.6 10.0 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF677 PF05055.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.24 10.3 6.3 0.31 9.9 6.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF677) Vps51 PF08700.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.24 11.5 8.0 1.6 8.9 4.8 3.2 1 1 1 2 2 1 0 Vps51/Vps67 Herpes_UL6 PF01763.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.26 9.8 4.2 0.29 9.6 4.2 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like HAUS-augmin3 PF14932.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.27 10.8 10.8 0.93 9.0 10.8 1.7 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 Prefoldin PF02996.17 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.29 11.1 16.0 0.32 10.9 3.3 3.1 1 1 2 3 3 3 0 Prefoldin subunit FAM76 PF16046.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.29 10.4 12.2 0.43 9.9 3.5 1.8 1 1 1 2 2 2 0 FAM76 protein KASH_CCD PF14662.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.3 10.9 15.0 0.89 9.4 15.0 1.6 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH V_ATPase_I PF01496.19 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.3 9.0 5.8 0.32 8.9 5.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CEP209_CC5 PF16574.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.3 11.3 15.2 0.35 11.1 8.9 2.2 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 CENP-H PF05837.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.31 11.5 13.0 0.5 10.8 13.0 1.4 1 1 0 1 1 1 0 Centromere protein H (CENP-H) Herpes_U30 PF04523.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.32 8.8 4.2 0.43 8.4 4.2 1.1 1 0 0 1 1 1 0 Herpes virus tegument protein U30 Cob_adeno_trans PF01923.18 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.33 11.1 4.6 0.79 9.8 4.4 1.7 1 1 0 1 1 1 0 Cobalamin adenosyltransferase OmpH PF03938.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.33 11.3 15.2 0.99 9.7 15.2 1.8 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) CENP-Q PF13094.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.38 10.9 11.8 1.2 9.3 1.2 2.3 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Sec8_exocyst PF04048.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.38 10.6 7.7 1.4 8.8 7.7 1.8 1 1 0 1 1 1 0 Sec8 exocyst complex component specific domain DUF1759 PF03564.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.39 10.6 4.6 0.73 9.8 4.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1759) RPW8 PF05659.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.39 10.4 10.1 3.2 7.4 5.4 2.4 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 VPS38 PF17649.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.42 9.4 5.8 0.56 9.0 5.8 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting 38 FliD_C PF07195.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.43 10.0 6.5 0.82 9.0 6.5 1.4 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus bZIP_1 PF00170.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.44 10.7 11.4 1.2 9.2 2.1 2.9 1 1 2 3 3 3 0 bZIP transcription factor GvpL_GvpF PF06386.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.45 10.4 3.7 0.51 10.2 3.7 1.2 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF LOH1CR12 PF10158.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.51 10.4 7.8 0.84 9.7 2.2 2.2 1 1 1 2 2 2 0 Tumour suppressor protein IFT57 PF10498.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.55 9.1 13.9 0.29 10.1 9.4 1.7 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 Bacillus_HBL PF05791.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.56 10.0 10.9 4.8 7.0 10.9 2.1 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) Fmp27_WPPW PF10359.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.56 9.0 6.2 0.64 8.8 6.2 1.2 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Bcr-Abl_Oligo PF09036.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.59 10.2 4.1 0.7 9.9 1.3 2.2 1 1 1 2 2 1 0 Bcr-Abl oncoprotein oligomerisation domain DUF4988 PF16378.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.61 9.7 10.8 0.22 11.1 2.6 2.4 1 1 1 2 2 2 0 Domain of unknown function PHM7_cyt PF14703.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.62 10.3 8.5 1.2 9.3 4.5 2.2 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Occludin_ELL PF07303.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.65 10.8 6.3 0.97 10.2 1.9 2.4 1 1 1 2 2 2 0 Occludin homology domain DASH_Spc34 PF08657.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.69 9.7 12.2 3.2 7.5 12.2 1.8 1 1 0 1 1 1 0 DASH complex subunit Spc34 Ax_dynein_light PF10211.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.71 9.8 12.7 0.98 9.3 11.7 1.7 1 1 1 2 2 2 0 Axonemal dynein light chain FmiP_Thoc5 PF09766.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.73 9.1 10.0 1.9 7.7 10.0 1.5 1 1 0 1 1 1 0 Fms-interacting protein/Thoc5 DHR10 PF18595.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.78 9.8 17.3 4.9 7.3 17.3 1.9 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain DUF848 PF05852.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.82 9.8 12.8 0.52 10.4 3.1 2.0 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) BLOC1_2 PF10046.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.82 10.0 14.5 6.4 7.2 12.1 2.8 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HBM PF16591.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.88 8.9 8.8 0.94 8.9 5.8 1.8 1 1 1 2 2 2 0 Helical bimodular sensor domain SKA1 PF07160.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.95 9.3 11.9 3.3 7.5 8.7 1.9 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 KxDL PF10241.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.96 9.8 9.0 2.6 8.4 0.9 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein DUF5082 PF16888.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.97 9.7 16.6 0.24 11.7 7.5 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF1192 PF06698.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.99 9.5 25.1 7.1 6.8 4.2 4.5 1 1 3 4 4 4 0 Protein of unknown function (DUF1192) Lge1 PF11488.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1 9.6 12.3 5.6 7.2 6.1 2.3 1 1 1 2 2 2 0 Transcriptional regulatory protein LGE1 ACCA PF03255.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1 9.2 10.6 6.6 6.6 10.6 2.0 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FPP PF05911.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1 7.4 14.3 2.9 6.0 14.2 1.6 1 1 0 1 1 1 0 Filament-like plant protein, long coiled-coil Mitofilin PF09731.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.1 8.0 11.4 1.3 7.8 11.4 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein ECM11 PF15463.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.1 9.8 9.7 5.7 7.5 1.8 2.1 1 1 1 2 2 2 0 Extracellular mutant protein 11 Cytochrom_B562 PF07361.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.1 9.9 7.1 1.6 9.5 4.3 1.6 1 1 1 2 2 2 0 Cytochrome b562 CP12 PF02672.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.2 10.0 6.3 8.6 7.2 5.3 2.4 1 1 1 2 2 2 0 CP12 domain FemAB PF02388.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.2 8.0 6.1 1.3 7.8 5.6 1.3 1 1 0 1 1 1 0 FemAB family THOC7 PF05615.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.2 9.4 13.7 3.1 8.1 13.7 1.7 1 1 0 1 1 1 0 Tho complex subunit 7 DASH_Dam1 PF08653.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.3 8.9 3.3 11 6.0 0.6 2.7 1 1 1 2 2 2 0 DASH complex subunit Dam1 Synaptobrevin PF00957.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.3 8.9 12.5 0.57 10.0 2.3 2.5 1 1 1 2 2 2 0 Synaptobrevin Spc42p PF11544.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.3 9.0 13.6 3.6 7.7 1.6 3.3 1 1 2 3 3 3 0 Spindle pole body component Spc42p LMBR1 PF04791.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.3 7.8 2.5 1.4 7.7 2.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Phage_HK97_TLTM PF06120.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.4 8.0 11.5 0.39 9.8 7.3 1.8 1 1 1 2 2 2 0 Tail length tape measure protein MRPL52 PF18699.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.4 9.1 15.5 1.3 9.3 3.6 3.0 1 1 2 3 3 3 0 Mitoribosomal protein mL52 5_nucleotid PF05761.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.5 7.7 7.6 1.8 7.3 7.6 1.1 1 0 0 1 1 1 0 5' nucleotidase family Rho_Binding PF08912.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.5 9.7 12.8 1.6e+02 3.2 12.7 2.9 1 1 0 1 1 1 0 Rho Binding DUF4337 PF14235.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.5 8.9 8.1 1.1 9.3 5.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4337) Fzo_mitofusin PF04799.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.6 8.3 8.8 13 5.3 8.8 2.1 1 1 0 1 1 1 0 fzo-like conserved region DUF4298 PF14131.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.7 8.7 7.8 6.7 6.8 0.6 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4298) GIT_CC PF16559.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.9 8.4 6.8 11 5.9 1.1 2.5 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor RRP36 PF06102.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.9 8.4 9.2 3.1 7.7 8.2 1.8 1 1 1 2 2 2 0 rRNA biogenesis protein RRP36 DUF2968 PF11180.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.9 8.1 10.8 5.1 6.7 10.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2968) Swi5 PF07061.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.9 8.6 13.6 1.7 8.8 5.2 3.0 1 1 1 2 2 2 0 Swi5 DUF1910 PF08928.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2 8.5 7.7 14 5.7 5.4 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF1910) DUF4315 PF14193.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2 8.4 15.2 0.14 12.2 9.0 2.1 1 1 0 2 2 1 0 Domain of unknown function (DUF4315) ABC_tran_CTD PF16326.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.4 8.5 21.8 3.1e+02 1.7 21.8 3.1 1 1 0 1 1 1 0 ABC transporter C-terminal domain V-SNARE PF05008.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.5 8.5 13.5 19 5.7 13.6 2.2 1 1 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus DUF4349 PF14257.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.5 7.5 13.4 2.1 7.7 6.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4349) Mt_ATP-synt_D PF05873.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.6 7.9 7.9 9.6 6.0 7.3 2.2 1 1 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) Troponin PF00992.20 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.6 8.3 14.5 1.6 9.0 8.4 2.1 1 1 1 2 2 2 0 Troponin XhlA PF10779.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.9 8.2 16.3 0.41 10.9 8.5 2.8 1 1 2 3 3 2 0 Haemolysin XhlA Macoilin PF09726.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.9 6.3 8.0 3.4 6.1 8.0 1.1 1 0 0 1 1 1 0 Macoilin family Ribosomal_S6 PF01250.17 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.1 8.2 7.2 4.5 7.6 0.6 2.3 1 1 1 2 2 2 0 Ribosomal protein S6 MIP-T3_C PF17749.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.3 7.7 17.8 4.2 7.3 4.0 2.5 1 1 1 2 2 2 0 Microtubule-binding protein MIP-T3 C-terminal region KIP1 PF07765.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.6 7.8 7.4 1.6 8.9 3.7 2.1 1 1 1 2 2 2 0 KIP1-like protein LUC7 PF03194.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.6 7.2 9.2 2.7 7.6 7.7 1.4 1 1 0 1 1 1 0 LUC7 N_terminus Histone_HNS PF00816.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.6 8.5 10.2 1.4 9.8 6.7 2.0 1 1 1 2 2 2 0 H-NS histone family LidA_Long_CC PF18641.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.2 7.4 13.0 8.6 6.4 8.7 2.2 1 1 2 3 3 3 0 LidA long coiled-coil domain USP8_interact PF08941.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.3 7.1 10.6 3.5 7.4 1.2 2.1 1 1 1 2 2 2 0 USP8 interacting Cluap1 PF10234.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.4 6.6 12.4 7.1 5.9 12.1 1.5 1 1 1 2 2 2 0 Clusterin-associated protein-1 T4SS PF07996.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.6 7.6 13.9 1.2 9.5 2.2 2.7 1 1 1 2 2 2 0 Type IV secretion system proteins GTP-bdg_M PF16360.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.6 7.9 11.2 8.3 7.1 4.6 3.0 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region Syntaxin-6_N PF09177.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.8 7.8 10.5 25 5.5 10.5 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Allexi_40kDa PF05549.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 5 6.6 5.5 8.3 5.8 5.5 1.4 1 1 0 1 1 1 0 Allexivirus 40kDa protein DUF4404 PF14357.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 5.1 7.8 11.1 18 6.1 1.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) DUF919 PF06034.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 5.5 6.9 18.8 2.2 8.2 9.1 3.2 1 1 3 4 4 3 0 Nucleopolyhedrovirus protein of unknown function (DUF919) DUF4061 PF13270.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 5.5 7.4 9.5 3.9 7.8 4.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4061) DUF4140 PF13600.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.1 7.4 13.3 1.4e+02 3.0 13.3 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) PhoU PF01895.19 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.1 7.4 13.4 3.1 8.3 2.0 2.9 1 1 2 3 3 2 0 PhoU domain HalX PF08663.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.2 7.2 10.1 8.1 6.8 5.6 2.6 2 1 1 3 3 2 0 HalX domain TPD52 PF04201.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.7 6.3 9.0 7 6.2 7.8 1.5 1 1 1 2 2 1 0 Tumour protein D52 family PCRF PF03462.18 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.7 6.5 9.9 9.4 6.1 9.6 1.3 1 1 0 1 1 1 0 PCRF domain DASH_Dad1 PF08649.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.9 6.9 7.7 1.9 8.7 0.5 2.7 2 1 0 2 2 2 0 DASH complex subunit Dad1 Bap31_Bap29_C PF18035.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 7.1 6.7 14.1 92 3.2 0.0 3.9 2 1 0 2 2 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain Paramyx_P_V_C PF03210.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 7.5 6.3 10.4 8.2 6.2 3.4 2.5 1 1 2 3 3 3 0 Paramyxovirus P/V phosphoprotein C-terminal Med21 PF11221.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 7.9 6.7 16.6 7 6.9 11.9 2.5 1 1 2 3 3 3 0 Subunit 21 of Mediator complex DUF2443 PF10398.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 9.3 6.4 11.7 4.9 7.3 0.8 3.4 1 1 2 3 3 3 0 Protein of unknown function (DUF2443) DIOX_N PF14226.6 NODE_48040_length_396_cov_2.277008_g40175_i0reverse_frame_2 - 0.0008 20.1 0.0 0.0029 18.3 0.0 1.8 1 1 0 2 2 2 1 non-haem dioxygenase in morphine synthesis N-terminal DUF2018 PF09442.10 NODE_48040_length_396_cov_2.277008_g40175_i0reverse_frame_2 - 0.038 15.0 0.0 0.054 14.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2018) Glu_cyclase_2 PF05096.12 NODE_48039_length_396_cov_2.310249_g40174_i0forward_frame_2 - 1.5e-17 63.8 0.2 5.1e-17 62.1 0.2 1.7 1 1 0 1 1 1 1 Glutamine cyclotransferase YmzC PF14157.6 NODE_48039_length_396_cov_2.310249_g40174_i0forward_frame_2 - 0.0016 18.4 0.0 0.62 10.2 0.0 2.3 2 0 0 2 2 2 2 YmzC-like protein HTS PF04204.16 NODE_48035_length_396_cov_3.002770_g40170_i0forward_frame_2 - 5.6e-25 87.9 0.2 8.9e-25 87.2 0.2 1.3 1 0 0 1 1 1 1 Homoserine O-succinyltransferase OKR_DC_1 PF01276.20 NODE_48030_length_396_cov_3.614958_g40165_i0reverse_frame_2 - 7.6e-25 87.5 0.2 2.3e-24 85.9 0.1 1.7 2 0 0 2 2 2 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_N PF03709.15 NODE_48030_length_396_cov_3.614958_g40165_i0reverse_frame_2 - 1.3e-12 48.0 0.1 1.6e-12 47.7 0.1 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, N-terminal domain DUF3368 PF11848.8 NODE_48030_length_396_cov_3.614958_g40165_i0forward_frame_3 - 0.069 12.9 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3368) DUF5630 PF18632.1 NODE_48025_length_396_cov_33.481994_g40160_i0forward_frame_3 - 0.075 12.3 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5630) ESPR PF13018.6 NODE_48025_length_396_cov_33.481994_g40160_i0forward_frame_2 - 0.085 12.7 1.1 0.23 11.3 1.1 1.8 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system UPF0730 PF15827.5 NODE_48022_length_396_cov_67.163435_g40158_i0reverse_frame_3 - 0.074 12.8 3.1 0.28 10.9 0.7 2.2 2 0 0 2 2 2 0 UPF0730 unknown protein family Herpes_IE2_3 PF03361.14 NODE_48015_length_396_cov_86.282548_g40151_i0forward_frame_2 - 0.023 14.6 0.3 0.03 14.2 0.3 1.2 1 0 0 1 1 1 0 Herpes virus intermediate/early protein 2/3 Fcf1 PF04900.12 NODE_48015_length_396_cov_86.282548_g40151_i0forward_frame_2 - 0.079 13.4 0.1 0.36 11.3 0.1 1.9 1 1 1 2 2 2 0 Fcf1 DUSP PF06337.12 NODE_48012_length_396_cov_97.240997_g40148_i0forward_frame_3 - 0.00084 19.9 0.9 0.001 19.6 0.9 1.2 1 0 0 1 1 1 1 DUSP domain HMG_box PF00505.19 NODE_48010_length_396_cov_126.282548_g40146_i0reverse_frame_3 - 9.4e-12 45.2 1.9 1.8e-11 44.3 1.9 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_48010_length_396_cov_126.282548_g40146_i0reverse_frame_3 - 1.5e-06 28.7 1.7 1.5e-06 28.7 1.7 1.8 1 1 0 1 1 1 1 HMG-box domain Ccdc124 PF06244.12 NODE_48010_length_396_cov_126.282548_g40146_i0reverse_frame_3 - 0.023 15.2 1.0 0.023 15.2 1.0 2.1 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 124 /Oxs1 MORN PF02493.20 NODE_48008_length_396_cov_130.204986_g40144_i0reverse_frame_3 - 7.8e-19 66.4 21.6 1.1e-06 28.2 0.0 4.1 4 0 0 4 4 4 3 MORN repeat CbiQ PF02361.16 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_2 - 3.1 7.3 5.9 2 8.0 4.0 1.6 2 0 0 2 2 2 0 Cobalt transport protein Resistin PF06954.11 NODE_48006_length_396_cov_150.027701_g40142_i0forward_frame_2 - 2.3 8.8 5.7 1.8 9.2 1.7 2.1 2 0 0 2 2 2 0 Resistin OrfA PF17495.2 NODE_48003_length_396_cov_160.775623_g40139_i0reverse_frame_3 - 0.11 12.7 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Vpr-like OrfA IL3 PF02059.15 NODE_47998_length_396_cov_189.476454_g40134_i0reverse_frame_3 - 0.024 14.7 0.2 0.032 14.3 0.2 1.3 1 0 0 1 1 1 0 Interleukin-3 PE_PPE_C PF12484.8 NODE_47997_length_396_cov_193.562327_g40133_i0forward_frame_2 - 0.006 17.5 0.3 0.0089 16.9 0.3 1.3 1 0 0 1 1 1 1 Polymorphic PE/PPE proteins C terminal Symplekin_C PF12295.8 NODE_47995_length_396_cov_204.326870_g40131_i0reverse_frame_3 - 0.068 13.3 0.0 0.087 12.9 0.0 1.2 1 0 0 1 1 1 0 Symplekin tight junction protein C terminal BolA PF01722.18 NODE_47995_length_396_cov_204.326870_g40131_i0forward_frame_3 - 8.9e-12 45.1 0.0 1.2e-11 44.7 0.0 1.2 1 0 0 1 1 1 1 BolA-like protein FAD-SLDH PF12318.8 NODE_47993_length_396_cov_237.695291_g40129_i0reverse_frame_2 - 0.084 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase Ribonuc_L-PSP PF01042.21 ORF99593 - 2.3e-31 108.3 0.0 2.5e-31 108.2 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Rad60-SLD PF11976.8 ORF99593 - 0.15 11.9 0.1 0.44 10.4 0.1 1.8 1 1 1 2 2 2 0 Ubiquitin-2 like Rad60 SUMO-like ROK PF00480.20 ORF98199 - 5.8e-05 22.7 0.0 7.1e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 ROK family DUF1461 PF07314.11 ORF97243 - 0.3 11.0 0.5 0.38 10.6 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) Shisa PF13908.6 ORF96855 - 5.2e-07 30.1 0.8 6.1e-07 29.9 0.8 1.0 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Cadherin_C_2 PF16492.5 ORF96855 - 0.00039 21.1 0.5 0.00048 20.8 0.5 1.3 1 1 0 1 1 1 1 Cadherin cytoplasmic C-terminal FAM163 PF15069.6 ORF96855 - 0.0038 17.7 0.7 0.0051 17.3 0.7 1.2 1 0 0 1 1 1 1 FAM163 family TMEM154 PF15102.6 ORF96855 - 0.0057 16.6 1.8 0.0065 16.4 0.1 1.8 1 1 1 2 2 2 1 TMEM154 protein family Vps36-NZF-N PF16988.5 ORF96855 - 0.023 14.1 1.5 0.063 12.7 1.5 1.7 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain AJAP1_PANP_C PF15298.6 ORF96855 - 0.045 14.0 0.4 0.045 14.0 0.4 1.9 1 1 1 2 2 2 0 AJAP1/PANP C-terminus Insulin_TMD PF17870.1 ORF96855 - 0.047 13.8 0.3 0.08 13.0 0.3 1.3 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment ETRAMP PF09716.10 ORF96855 - 0.062 13.4 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) EphA2_TM PF14575.6 ORF96855 - 0.067 14.1 0.5 0.09 13.7 0.5 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Ly49 PF08391.10 ORF96855 - 0.12 12.7 1.0 0.19 12.1 1.0 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region DUF3481 PF11980.8 ORF96855 - 0.16 11.7 1.6 0.25 11.1 1.6 1.2 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein DUF4834 PF16118.5 ORF96855 - 0.2 12.6 0.7 0.42 11.6 0.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) Ribosomal_S9 PF00380.19 ORF96585 - 6.7e-46 155.7 0.6 7.5e-46 155.6 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Malate_synthase PF01274.22 ORF96454 - 0.06 11.6 0.0 0.064 11.5 0.0 1.1 1 0 0 1 1 1 0 Malate synthase EF-hand_1 PF00036.32 ORF95974 - 0.0067 15.9 0.1 0.14 11.8 0.0 2.7 3 0 0 3 3 3 1 EF hand Polysacc_syn_2C PF08485.10 ORF95974 - 0.014 15.1 0.1 0.04 13.6 0.1 1.8 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein C-terminal EF-hand_7 PF13499.6 ORF95974 - 0.031 14.7 0.0 0.083 13.3 0.0 1.8 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF95974 - 0.059 13.3 0.0 0.26 11.3 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain GREB1 PF15782.5 ORF95658 - 0.29 8.2 4.9 0.32 8.0 4.9 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer I-EGF_1 PF18372.1 ORF94890 - 0.029 14.5 0.1 0.87 9.7 0.0 2.3 2 0 0 2 2 2 0 Integrin beta epidermal growth factor like domain 1 EcoEI_R_C PF08463.10 ORF94381 - 0.092 12.9 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 EcoEI R protein C-terminal zf-met2 PF12907.7 ORF9391 - 0.37 11.0 0.2 0.37 11.0 0.2 2.0 3 0 0 3 3 3 0 Zinc-binding Ribosomal_S11 PF00411.19 ORF93566 - 5.2e-44 149.1 1.3 6.2e-44 148.9 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 I-EGF_1 PF18372.1 ORF9349 - 0.029 14.5 0.1 0.87 9.7 0.0 2.3 2 0 0 2 2 2 0 Integrin beta epidermal growth factor like domain 1 zf-met2 PF12907.7 ORF91874 - 0.37 11.0 0.2 0.37 11.0 0.2 2.0 3 0 0 3 3 3 0 Zinc-binding BPL_N PF09825.9 ORF90914 - 0.091 11.8 0.5 0.11 11.6 0.5 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF5383 PF17355.2 ORF90914 - 0.097 13.0 3.9 0.22 11.9 1.4 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5383) Peptidase_C62 PF12380.8 ORF900 - 0.0015 17.7 0.1 0.0016 17.6 0.1 1.2 1 0 0 1 1 1 1 Gill-associated viral 3C-like peptidase HAD_2 PF13419.6 ORF89888 - 0.0081 16.3 0.2 0.009 16.1 0.2 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Cyclin_C PF02984.19 ORF89888 - 0.081 13.0 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Cyclin, C-terminal domain Ribosomal_S11 PF00411.19 ORF88765 - 5.2e-44 149.1 1.3 6.2e-44 148.9 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 DUF4488 PF14869.6 ORF88644 - 0.14 12.1 2.5 3.7 7.5 0.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4488) RNA_pol_Rpb2_1 PF04563.15 ORF88644 - 0.2 11.2 3.5 0.2 11.1 2.8 1.3 1 1 0 1 1 1 0 RNA polymerase beta subunit Mito_carr PF00153.27 ORF87873 - 0.002 18.0 0.4 0.0034 17.3 0.4 1.4 1 0 0 1 1 1 1 Mitochondrial carrier protein PT-VENN PF04829.13 ORF87873 - 0.033 14.3 0.8 0.033 14.3 0.8 2.1 3 0 0 3 3 3 0 Pre-toxin domain with VENN motif Ribosomal_S5_C PF03719.15 ORF87873 - 0.083 12.4 0.3 0.17 11.3 0.3 1.6 1 0 0 1 1 1 0 Ribosomal protein S5, C-terminal domain eIF-5a PF01287.20 ORF87498 - 8.5e-11 41.8 0.0 1.1e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold Ail_Lom PF06316.11 ORF86933 - 1.9e-20 73.4 3.0 8.9e-18 64.7 3.0 2.2 1 1 0 1 1 1 1 Enterobacterial Ail/Lom protein OMP_b-brl PF13505.6 ORF86933 - 2.9e-19 69.9 11.3 3.2e-19 69.8 11.3 1.0 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain OMP_b-brl_3 PF14905.6 ORF86933 - 0.00017 20.7 0.8 0.0002 20.5 0.8 1.0 1 0 0 1 1 1 1 Outer membrane protein beta-barrel family OMP_b-brl_2 PF13568.6 ORF86933 - 0.0047 17.0 6.3 0.4 10.7 6.3 2.2 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain DUF3575 PF12099.8 ORF86933 - 0.069 12.5 1.4 0.094 12.0 1.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3575) Fumarate_red_C PF02300.17 ORF86345 - 2.2e-56 189.4 3.9 2.5e-56 189.2 3.9 1.0 1 0 0 1 1 1 1 Fumarate reductase subunit C CytochromB561_N PF09786.9 ORF86284 - 0.014 14.4 0.2 0.016 14.2 0.2 1.1 1 0 0 1 1 1 0 Cytochrome B561, N terminal NUDIX_4 PF14815.6 ORF85709 - 0.0048 16.9 0.0 0.0063 16.5 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Uds1 PF15456.6 ORF8520 - 0.25 11.5 3.1 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Up-regulated During Septation Endonuc_Holl PF10107.9 ORF84112 - 2.1 8.2 14.5 0.55 10.1 11.5 1.5 1 1 1 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase Uds1 PF15456.6 ORF82748 - 0.25 11.5 3.1 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Up-regulated During Septation NST1 PF13945.6 ORF81693 - 0.024 14.7 2.3 0.028 14.5 2.3 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator DUF373 PF04123.13 ORF81693 - 0.17 11.3 0.0 0.22 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) Tubulin_2 PF13809.6 ORF81182 - 0.0014 17.9 3.2 0.0015 17.8 3.2 1.0 1 0 0 1 1 1 1 Tubulin like MAM33 PF02330.16 ORF81058 - 2e-07 31.2 5.2 2.4e-07 30.9 5.2 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein SERTA PF06031.13 ORF81058 - 0.14 11.9 0.7 0.28 10.9 0.7 1.4 1 0 0 1 1 1 0 SERTA motif Spc7 PF08317.11 ORF8041 - 0.00041 19.3 3.9 0.00047 19.1 3.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein Filament PF00038.21 ORF8041 - 0.0069 16.0 2.5 0.009 15.6 2.5 1.1 1 0 0 1 1 1 1 Intermediate filament protein Sigma70_ner PF04546.13 ORF8041 - 0.013 15.4 3.4 0.015 15.2 3.4 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region ZYG-11_interact PF05884.12 ORF8041 - 0.027 13.9 0.4 0.03 13.7 0.4 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 Ribosomal_S15 PF00312.22 ORF8041 - 0.041 14.1 3.8 0.041 14.1 3.8 1.7 2 0 0 2 2 2 0 Ribosomal protein S15 VASP_tetra PF08776.11 ORF8041 - 0.057 13.0 2.8 0.057 13.0 2.8 2.8 2 1 0 2 2 2 0 VASP tetramerisation domain Syntaxin_2 PF14523.6 ORF8041 - 0.15 12.4 9.3 0.89 10.0 9.3 2.0 1 1 0 1 1 1 0 Syntaxin-like protein YtxH PF12732.7 ORF8041 - 0.47 11.0 2.4 8.7 7.0 0.1 2.3 2 0 0 2 2 2 0 YtxH-like protein ORC6 PF05460.13 ORF79426 - 0.4 9.9 11.1 0.44 9.8 11.1 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) RINGv PF12906.7 ORF79008 - 1.7e-15 56.8 2.9 2.6e-15 56.3 2.9 1.3 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF79008 - 0.0003 20.9 3.9 0.00043 20.4 3.9 1.2 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF79008 - 0.004 17.4 4.0 0.0068 16.7 4.0 1.4 1 0 0 1 1 1 1 Ring finger domain HH_signal PF01085.18 ORF79008 - 0.11 12.2 0.9 1.6 8.3 0.2 2.2 1 1 1 2 2 2 0 Hedgehog amino-terminal signalling domain AstE_AspA PF04952.14 ORF77131 - 0.16 11.1 0.1 0.22 10.6 0.1 1.2 1 0 0 1 1 1 0 Succinylglutamate desuccinylase / Aspartoacylase family DUF1582 PF07621.11 ORF76637 - 0.069 13.1 0.3 0.069 13.1 0.3 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF1582) IFT20 PF14931.6 ORF76301 - 9.1e-38 129.1 15.1 1e-37 128.9 15.1 1.0 1 0 0 1 1 1 1 Intraflagellar transport complex B, subunit 20 TMF_DNA_bd PF12329.8 ORF76301 - 0.06 13.3 12.9 0.086 12.9 7.2 2.4 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Atg14 PF10186.9 ORF76301 - 2.2 7.3 11.2 2.5 7.1 11.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMPIT PF07851.13 ORF76301 - 3.8 6.7 6.0 4.5 6.4 6.0 1.2 1 0 0 1 1 1 0 TMPIT-like protein Imm49 PF15575.6 ORF7622 - 0.0016 18.3 0.4 0.002 17.9 0.4 1.1 1 0 0 1 1 1 1 Immunity protein 49 Es2 PF09751.9 ORF7622 - 0.071 12.8 0.2 0.082 12.6 0.2 1.0 1 0 0 1 1 1 0 Nuclear protein Es2 ELH PF02323.15 ORF7622 - 0.1 11.9 0.1 0.13 11.6 0.1 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor MIP PF00230.20 ORF75854 - 5.5e-06 26.3 1.6 6.2e-06 26.1 1.6 1.1 1 0 0 1 1 1 1 Major intrinsic protein AKAP7_RIRII_bdg PF10470.9 ORF7509 - 0.017 15.2 0.7 0.031 14.4 0.2 1.6 2 0 0 2 2 2 0 PKA-RI-RII subunit binding domain of A-kinase anchor protein RICH PF05062.12 ORF7509 - 0.046 14.1 3.4 0.75 10.2 1.2 2.3 2 0 0 2 2 2 0 RICH domain 4HB_MCP_1 PF12729.7 ORF7509 - 0.054 13.0 1.9 0.075 12.6 1.9 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction Chordopox_A30L PF06015.12 ORF7509 - 0.099 12.5 1.0 0.54 10.1 0.9 2.1 2 1 0 2 2 2 0 Chordopoxvirus A30L protein Ribosomal_S11 PF00411.19 ORF74809 - 5.2e-44 149.1 1.3 6.2e-44 148.9 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 MIP PF00230.20 ORF74609 - 5.5e-06 26.3 1.6 6.2e-06 26.1 1.6 1.1 1 0 0 1 1 1 1 Major intrinsic protein CD45 PF12567.8 ORF73553 - 0.25 11.3 1.1 2.4 8.2 0.4 2.2 2 0 0 2 2 2 0 Leukocyte receptor CD45 Gpi16 PF04113.14 ORF73298 - 0.054 11.9 0.1 0.082 11.3 0.1 1.3 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component Cas_Cas4 PF01930.17 ORF73298 - 0.12 12.5 0.6 0.16 12.1 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF83 BST2 PF16716.5 ORF73298 - 0.24 12.0 3.1 0.41 11.2 3.1 1.4 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Uds1 PF15456.6 ORF72425 - 0.033 14.4 4.2 0.041 14.0 4.2 1.1 1 0 0 1 1 1 0 Up-regulated During Septation DUF2110 PF09883.9 ORF72425 - 0.038 13.6 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2110) V_ATPase_I PF01496.19 ORF72425 - 0.38 8.6 5.9 0.4 8.5 5.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family fn3_2 PF16893.5 ORF71709 - 0.11 12.7 0.7 0.15 12.2 0.7 1.4 1 0 0 1 1 1 0 Fibronectin type III domain TACC_C PF05010.14 ORF7130 - 0.017 14.9 18.1 0.08 12.7 14.2 2.0 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Spc7 PF08317.11 ORF7130 - 0.031 13.2 18.3 0.04 12.8 18.3 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Phage_lysis PF03245.13 ORF7130 - 0.11 12.7 6.7 0.066 13.3 4.6 1.7 1 1 1 2 2 2 0 Bacteriophage Rz lysis protein TPR_MLP1_2 PF07926.12 ORF7130 - 0.12 12.4 17.9 0.22 11.6 17.4 1.7 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein GAS PF13851.6 ORF7130 - 0.26 10.6 22.4 0.1 12.0 17.1 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding ADIP PF11559.8 ORF7130 - 0.3 11.1 15.5 0.09 12.9 11.6 1.8 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding LPP PF04728.13 ORF7130 - 0.4 11.1 6.8 0.29 11.5 1.8 2.8 2 2 1 3 3 3 0 Lipoprotein leucine-zipper DUF4407 PF14362.6 ORF7130 - 0.45 9.8 10.7 0.52 9.6 10.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMF_TATA_bd PF12325.8 ORF7130 - 0.8 9.9 18.9 1.2 9.4 4.0 2.9 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding APG6_N PF17675.1 ORF7130 - 1.3 9.5 24.2 1.8 9.1 24.2 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Occludin_ELL PF07303.13 ORF7130 - 1.5 9.6 17.1 0.9 10.3 1.1 2.1 1 1 1 2 2 2 0 Occludin homology domain HIP1_clath_bdg PF16515.5 ORF7130 - 1.6 9.4 14.1 1.5 9.5 9.2 2.1 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Exonuc_VII_L PF02601.15 ORF7130 - 2.1 7.8 9.0 2.3 7.7 9.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit CENP-H PF05837.12 ORF7130 - 3 8.3 10.9 4.2 7.8 10.2 1.7 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DUF3450 PF11932.8 ORF7130 - 3.6 6.8 17.7 1.5 8.1 10.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Nup88 PF10168.9 ORF7130 - 3.6 5.3 14.6 4.4 5.0 14.6 1.0 1 0 0 1 1 1 0 Nuclear pore component DUF1664 PF07889.12 ORF7130 - 3.7 7.6 6.4 6 6.9 6.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF262 PF03235.14 ORF7130 - 4.3 7.4 12.0 5.4 7.1 12.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF262 DUF2203 PF09969.9 ORF7130 - 5.7 7.7 9.5 3 8.6 5.7 1.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Phlebovirus_NSM PF07246.11 ORF7130 - 5.8 6.2 11.9 6.6 6.0 11.9 1.0 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M AAA_11 PF13086.6 ORF7130 - 8.1 6.1 8.9 9.2 6.0 8.9 1.1 1 0 0 1 1 1 0 AAA domain PRKG1_interact PF15898.5 ORF7130 - 8.4 7.4 18.6 6.1 7.8 2.3 2.5 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain PV-1 PF06637.11 ORF70585 - 0.0055 15.6 1.2 0.0063 15.4 1.2 1.1 1 0 0 1 1 1 1 PV-1 protein (PLVAP) Proteasome PF00227.26 ORF70262 - 1.1e-27 96.8 0.2 1.2e-27 96.6 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit FAM167 PF11652.8 ORF70262 - 0.074 13.5 0.5 0.13 12.8 0.5 1.5 1 1 0 1 1 1 0 FAM167 Uds1 PF15456.6 ORF67148 - 0.25 11.5 3.1 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Up-regulated During Septation Rep_fac-A_3 PF08661.11 ORF66341 - 9.3e-10 38.8 0.0 1.1e-09 38.6 0.0 1.1 1 0 0 1 1 1 1 Replication factor A protein 3 BLOC1_2 PF10046.9 ORF66098 - 0.00017 21.8 9.8 0.00017 21.8 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_TATA_bd PF12325.8 ORF66098 - 0.0052 17.0 10.8 0.29 11.4 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding GAS PF13851.6 ORF66098 - 0.015 14.6 13.1 0.014 14.7 12.1 1.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF66098 - 0.017 12.7 6.9 0.02 12.4 6.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Spc7 PF08317.11 ORF66098 - 0.017 14.0 9.4 0.022 13.6 9.4 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Leu_zip PF15294.6 ORF66098 - 0.019 14.5 10.1 0.023 14.2 10.1 1.1 1 0 0 1 1 1 0 Leucine zipper Baculo_PEP_C PF04513.12 ORF66098 - 0.025 14.6 6.6 0.032 14.3 6.6 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Vps53_N PF04100.12 ORF66098 - 0.029 13.3 7.1 0.011 14.7 4.3 1.5 1 1 0 1 1 1 0 Vps53-like, N-terminal DUF1664 PF07889.12 ORF66098 - 0.049 13.7 9.6 0.37 10.8 4.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) ZnuA PF01297.17 ORF66098 - 0.062 12.7 1.5 0.081 12.3 1.5 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic PRKG1_interact PF15898.5 ORF66098 - 0.073 14.0 7.0 0.58 11.1 0.5 2.3 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain CEP63 PF17045.5 ORF66098 - 0.088 12.7 9.6 0.47 10.3 9.5 1.8 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa ATG16 PF08614.11 ORF66098 - 0.1 12.8 8.5 1.2 9.3 1.1 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIC PF04977.15 ORF66098 - 0.11 12.3 9.3 1.6 8.5 1.5 2.5 1 1 1 2 2 2 0 Septum formation initiator Tuberin PF03542.16 ORF66098 - 0.11 11.6 3.2 0.12 11.5 3.2 1.0 1 0 0 1 1 1 0 Tuberin RasGAP_C PF03836.15 ORF66098 - 0.2 11.8 8.6 2.5 8.2 2.8 2.1 1 1 1 2 2 2 0 RasGAP C-terminus TSNAXIP1_N PF15739.5 ORF66098 - 0.21 12.0 7.7 0.14 12.6 0.7 2.3 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus Fib_alpha PF08702.10 ORF66098 - 0.22 11.7 11.2 3.3 7.9 0.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Macoilin PF09726.9 ORF66098 - 0.24 9.9 8.6 0.35 9.4 8.6 1.2 1 0 0 1 1 1 0 Macoilin family Spc24 PF08286.11 ORF66098 - 0.26 11.5 10.8 55 4.1 10.8 2.2 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 TMPIT PF07851.13 ORF66098 - 0.32 10.2 7.2 0.17 11.1 4.8 1.5 1 1 1 2 2 2 0 TMPIT-like protein Tup_N PF08581.10 ORF66098 - 0.35 11.2 10.0 4.7 7.6 1.0 2.2 1 1 1 2 2 2 0 Tup N-terminal BPL_N PF09825.9 ORF66098 - 0.61 9.1 4.8 0.69 8.9 4.8 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal Csm2_III-A PF03750.13 ORF66098 - 0.73 10.7 5.8 0.61 10.9 2.2 2.0 1 1 1 2 2 2 0 Csm2 Type III-A FlaC_arch PF05377.11 ORF66098 - 1 9.8 13.4 3.5 8.1 0.8 3.5 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) UPF0242 PF06785.11 ORF66098 - 1 9.4 10.4 1.3 9.1 10.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5595 PF18077.1 ORF66098 - 1.6 8.9 8.2 1.9 8.6 2.4 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5595) USP8_interact PF08941.10 ORF66098 - 1.8 8.3 8.7 0.29 10.9 0.7 2.0 1 1 1 2 2 2 0 USP8 interacting NPV_P10 PF05531.12 ORF66098 - 3.5 8.2 10.5 4.4 7.8 6.8 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 ORF66098 - 5.7 7.6 10.9 4.4e+02 1.6 10.9 2.2 1 1 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF66098 - 6.3 7.5 7.9 14 6.4 3.1 2.5 1 1 2 3 3 3 0 SlyX Peptidase_C97 PF05903.14 ORF6603 - 0.0029 17.5 0.0 0.0044 16.8 0.0 1.3 1 0 0 1 1 1 1 PPPDE putative peptidase domain bZIP_1 PF00170.21 ORF66004 - 0.00022 21.3 14.0 0.00022 21.3 14.0 2.4 2 1 1 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF66004 - 0.00051 20.1 15.9 0.0012 18.9 15.9 1.7 1 0 0 1 1 1 1 Basic region leucine zipper DUF4011 PF13195.6 ORF66004 - 0.0098 15.8 2.9 0.012 15.5 2.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4011) Use1 PF09753.9 ORF66004 - 0.062 13.0 10.2 0.36 10.5 2.3 2.0 1 1 1 2 2 2 0 Membrane fusion protein Use1 Tyrosinase PF00264.20 ORF66004 - 0.16 12.3 0.8 0.18 12.1 0.8 1.0 1 0 0 1 1 1 0 Common central domain of tyrosinase MRF_C1 PF13887.6 ORF66004 - 0.26 10.5 7.1 2.7 7.2 1.3 2.4 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 Phlebovirus_NSM PF07246.11 ORF66004 - 0.31 10.4 8.9 0.5 9.7 8.9 1.3 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M Nnf1 PF03980.14 ORF66004 - 0.73 10.2 8.8 8.2 6.9 8.8 2.0 1 1 0 1 1 1 0 Nnf1 CtIP_N PF10482.9 ORF66004 - 0.9 9.6 10.3 1.7 8.7 10.3 1.6 1 1 0 1 1 1 0 Tumour-suppressor protein CtIP N-terminal domain CDC45 PF02724.14 ORF66004 - 8.5 4.5 10.6 9.3 4.4 10.6 1.0 1 0 0 1 1 1 0 CDC45-like protein AC_N PF16214.5 ORF65058 - 0.99 8.5 3.4 1.3 8.1 3.4 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Ribosomal_S6 PF01250.17 ORF64787 - 4e-28 97.5 0.1 5.2e-28 97.2 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S6 DUF2313 PF10076.9 ORF64787 - 0.063 13.1 0.0 0.3 10.9 0.0 1.8 1 1 1 2 2 2 0 Uncharacterised protein conserved in bacteria (DUF2313) NOA36 PF06524.12 ORF64537 - 0.75 9.1 3.2 0.88 8.8 3.2 1.1 1 0 0 1 1 1 0 NOA36 protein CENP-B_dimeris PF09026.10 ORF64537 - 4 7.9 10.6 6.1 7.3 10.6 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain Cytochrome_CBB3 PF13442.6 ORF64160 - 3e-06 27.5 0.1 5.3e-06 26.7 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF64160 - 0.00015 21.5 0.0 0.00021 21.0 0.0 1.1 1 0 0 1 1 1 1 Cytochrome c-550 domain Cytochrom_C PF00034.21 ORF64160 - 0.0031 18.6 0.1 0.0048 18.0 0.1 1.3 1 0 0 1 1 1 1 Cytochrome c DUF2613 PF11021.8 ORF64160 - 1.1 9.4 8.6 0.22 11.6 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) NUDIX_4 PF14815.6 ORF64106 - 0.0048 16.9 0.0 0.0063 16.5 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Got1 PF04178.12 ORF62884 - 1e-26 93.6 8.4 1.2e-26 93.3 8.4 1.1 1 0 0 1 1 1 1 Got1/Sft2-like family DUF4957 PF16318.5 ORF61558 - 0.034 14.1 0.0 0.065 13.2 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4957) LIM PF00412.22 ORF61558 - 0.035 14.3 0.1 0.052 13.8 0.1 1.3 1 0 0 1 1 1 0 LIM domain Mgm101p PF06420.12 ORF61558 - 0.055 13.0 0.0 0.069 12.7 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial genome maintenance MGM101 zf-C3H2C3 PF17122.5 ORF60993 - 2.2 8.4 8.2 0.53 10.4 4.5 1.9 2 0 0 2 2 2 0 Zinc-finger Kelch_1 PF01344.25 ORF60720 - 5.6e-21 73.9 6.5 4.6e-13 48.5 0.0 4.2 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 ORF60720 - 8.9e-15 54.6 2.6 1e-08 35.2 0.0 3.9 3 1 0 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF60720 - 2.5e-13 49.8 4.1 3.3e-08 33.5 0.0 4.0 2 1 2 4 4 4 3 Kelch motif Kelch_2 PF07646.15 ORF60720 - 2.1e-12 46.5 1.0 3.6e-05 23.5 0.0 2.9 3 0 0 3 3 3 2 Kelch motif Kelch_4 PF13418.6 ORF60720 - 3.4e-11 43.0 6.4 2.3e-08 33.9 0.0 3.7 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF60720 - 0.0011 18.9 0.0 0.34 10.9 0.0 2.4 2 0 0 2 2 2 2 Kelch motif DUF4131 PF13567.6 ORF60404 - 0.072 12.7 0.9 0.092 12.4 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2892 PF11127.8 ORF60404 - 0.53 10.4 7.5 2.7 8.1 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) Spc7 PF08317.11 ORF59887 - 0.03 13.2 8.2 0.037 12.9 8.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein IglC PF11550.8 ORF59887 - 0.095 12.2 0.8 0.15 11.5 0.4 1.5 1 1 1 2 2 2 0 Intracellular growth locus C protein V_ATPase_I PF01496.19 ORF59887 - 0.11 10.4 6.5 0.12 10.3 6.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Seryl_tRNA_N PF02403.22 ORF59887 - 0.25 11.6 8.5 3.4 7.9 6.0 2.1 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Golgin_A5 PF09787.9 ORF59887 - 0.28 10.6 9.7 0.34 10.4 9.7 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 Ly49 PF08391.10 ORF59887 - 0.95 9.8 7.5 0.78 10.1 6.6 1.3 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region ADIP PF11559.8 ORF59887 - 1.7 8.7 14.7 20 5.2 14.7 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding YlqD PF11068.8 ORF59887 - 2.5 8.5 10.6 1.1 9.7 6.1 1.9 1 1 1 2 2 2 0 YlqD protein DivIC PF04977.15 ORF59887 - 3.7 7.4 11.1 3.2 7.6 6.6 2.2 2 0 0 2 2 2 0 Septum formation initiator UPF0242 PF06785.11 ORF59887 - 6.4 6.8 10.9 8 6.5 10.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Adeno_PV PF03910.13 ORF59538 - 0.011 14.5 0.5 0.013 14.3 0.5 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV Atg14 PF10186.9 ORF58655 - 0.016 14.3 6.6 0.018 14.2 6.6 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ZapB PF06005.12 ORF58655 - 0.34 11.4 10.1 0.65 10.5 9.7 1.8 1 1 0 1 1 1 0 Cell division protein ZapB DUF4845 PF16137.5 ORF58655 - 4.9 8.1 9.5 6.9 7.6 2.3 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4845) RINGv PF12906.7 ORF58300 - 1.7e-15 56.8 2.9 2.6e-15 56.3 2.9 1.3 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF58300 - 0.0003 20.9 3.9 0.00043 20.4 3.9 1.2 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF58300 - 0.004 17.4 4.0 0.0068 16.7 4.0 1.4 1 0 0 1 1 1 1 Ring finger domain HH_signal PF01085.18 ORF58300 - 0.11 12.2 0.9 1.6 8.3 0.2 2.2 1 1 1 2 2 2 0 Hedgehog amino-terminal signalling domain DUF4282 PF14110.6 ORF57253 - 0.0095 16.7 0.1 0.017 15.8 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4282) Tim17 PF02466.19 ORF57253 - 0.098 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family ADIP PF11559.8 ORF56986 - 0.0017 18.4 26.8 0.058 13.5 9.0 2.2 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding Filament PF00038.21 ORF56986 - 0.002 17.8 21.9 0.016 14.8 21.9 1.9 1 1 0 1 1 1 1 Intermediate filament protein RPW8 PF05659.11 ORF56986 - 0.0029 17.3 9.4 0.0063 16.2 3.4 2.2 1 1 1 2 2 2 1 Arabidopsis broad-spectrum mildew resistance protein RPW8 Lectin_N PF03954.14 ORF56986 - 0.0031 17.2 4.0 0.0031 17.2 4.0 2.2 1 1 1 2 2 2 1 Hepatic lectin, N-terminal domain DUF4200 PF13863.6 ORF56986 - 0.0033 17.8 27.9 0.053 13.9 14.3 2.7 1 1 0 2 2 2 2 Domain of unknown function (DUF4200) DUF1664 PF07889.12 ORF56986 - 0.0072 16.4 7.6 0.0072 16.4 7.6 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) Fungal_TACC PF12709.7 ORF56986 - 0.0082 16.6 2.9 0.0082 16.6 2.9 3.4 1 1 2 3 3 3 1 Fungal Transforming acidic coiled-coil (TACC) proteins BLOC1_2 PF10046.9 ORF56986 - 0.01 16.1 19.7 0.16 12.3 9.5 2.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DivIC PF04977.15 ORF56986 - 0.011 15.4 31.3 0.084 12.7 7.8 3.2 1 1 2 3 3 3 0 Septum formation initiator Tropomyosin_1 PF12718.7 ORF56986 - 0.017 15.3 27.8 0.15 12.2 27.6 2.1 1 1 0 1 1 1 0 Tropomyosin like SHE3 PF17078.5 ORF56986 - 0.017 14.8 20.6 0.014 15.1 19.5 1.4 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 DUF4407 PF14362.6 ORF56986 - 0.02 14.3 20.2 0.025 13.9 20.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) MscS_porin PF12795.7 ORF56986 - 0.027 14.0 26.6 0.084 12.4 26.5 1.7 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain Golgin_A5 PF09787.9 ORF56986 - 0.039 13.4 23.7 0.043 13.3 23.7 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 CorA PF01544.18 ORF56986 - 0.045 13.1 8.8 0.063 12.6 8.8 1.3 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein Laminin_II PF06009.12 ORF56986 - 0.047 13.7 18.5 0.063 13.3 7.0 2.0 1 1 1 2 2 2 0 Laminin Domain II DHR10 PF18595.1 ORF56986 - 0.048 13.7 28.2 0.062 13.4 12.6 2.2 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Cas_DxTHG PF09455.10 ORF56986 - 0.058 13.0 13.5 0.062 12.9 13.5 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family PspA_IM30 PF04012.12 ORF56986 - 0.071 12.7 22.6 0.12 11.9 9.9 2.2 1 1 1 2 2 2 0 PspA/IM30 family TPR_MLP1_2 PF07926.12 ORF56986 - 0.072 13.2 27.2 2 8.5 26.5 2.3 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein BST2 PF16716.5 ORF56986 - 0.078 13.6 25.6 0.081 13.5 11.3 2.2 1 1 0 2 2 2 0 Bone marrow stromal antigen 2 DUF3782 PF12644.7 ORF56986 - 0.086 13.0 0.3 0.086 13.0 0.3 2.8 1 1 0 2 2 2 0 Protein of unknown function (DUF3782) Nsp1_C PF05064.13 ORF56986 - 0.087 12.6 13.0 0.24 11.2 5.8 2.3 1 1 1 2 2 2 0 Nsp1-like C-terminal region PI3K_P85_iSH2 PF16454.5 ORF56986 - 0.09 12.4 23.3 0.2 11.2 19.6 2.0 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain CCDC144C PF14915.6 ORF56986 - 0.096 11.8 25.9 0.53 9.4 25.9 1.8 1 1 0 1 1 1 0 CCDC144C protein coiled-coil region GrpE PF01025.19 ORF56986 - 0.15 11.7 24.7 0.61 9.7 9.1 2.2 1 1 1 2 2 2 0 GrpE YscO PF07321.12 ORF56986 - 0.17 11.9 19.5 0.38 10.7 9.5 2.2 1 1 1 2 2 2 0 Type III secretion protein YscO DUF4140 PF13600.6 ORF56986 - 0.19 12.2 22.6 3.2 8.3 3.5 3.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Cob_adeno_trans PF01923.18 ORF56986 - 0.2 11.8 7.6 0.081 13.1 4.7 1.8 1 1 1 2 2 2 0 Cobalamin adenosyltransferase Seryl_tRNA_N PF02403.22 ORF56986 - 0.21 11.8 26.9 0.18 12.1 14.8 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Rootletin PF15035.6 ORF56986 - 0.22 11.5 22.1 0.25 11.4 4.6 2.6 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion SlyX PF04102.12 ORF56986 - 0.29 11.8 17.1 16 6.2 6.9 3.4 1 1 1 2 2 2 0 SlyX DUF4201 PF13870.6 ORF56986 - 0.31 10.8 25.5 0.37 10.5 5.5 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4201) TMF_DNA_bd PF12329.8 ORF56986 - 0.32 11.0 35.7 1.5 8.8 7.6 3.1 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF724 PF05266.14 ORF56986 - 0.35 10.7 24.7 0.33 10.8 12.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Uso1_p115_C PF04871.13 ORF56986 - 0.36 11.2 30.0 2.4 8.5 7.5 2.2 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region FlaC_arch PF05377.11 ORF56986 - 0.39 11.2 15.3 0.83 10.1 1.0 3.4 1 1 3 4 4 4 0 Flagella accessory protein C (FlaC) Snapin_Pallidin PF14712.6 ORF56986 - 0.39 11.1 21.2 2.4 8.6 9.5 2.8 1 1 2 3 3 3 0 Snapin/Pallidin FUSC PF04632.12 ORF56986 - 0.43 9.1 1.8 0.47 8.9 1.8 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF3450 PF11932.8 ORF56986 - 0.44 9.8 25.8 3.1 7.1 11.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) COG2 PF06148.11 ORF56986 - 0.5 10.5 12.6 1.3 9.1 6.0 2.1 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DASH_Dad4 PF08650.10 ORF56986 - 0.5 10.4 5.7 0.5 10.4 0.2 2.9 1 1 3 4 4 3 0 DASH complex subunit Dad4 GvpK PF05121.12 ORF56986 - 0.52 10.4 10.6 0.096 12.7 1.9 2.4 2 1 0 2 2 2 0 Gas vesicle protein K Not3 PF04065.15 ORF56986 - 0.54 9.6 22.4 3.1 7.2 8.9 2.1 1 1 1 2 2 2 0 Not1 N-terminal domain, CCR4-Not complex component UPF0242 PF06785.11 ORF56986 - 0.61 10.2 26.6 0.21 11.7 23.9 1.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus GAS PF13851.6 ORF56986 - 0.62 9.4 27.3 1.4 8.2 27.3 1.6 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Fez1 PF06818.15 ORF56986 - 0.67 10.4 22.9 1 9.7 10.9 2.0 1 1 1 2 2 2 0 Fez1 ATG16 PF08614.11 ORF56986 - 0.73 10.0 24.8 58 3.8 24.8 2.1 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Fzo_mitofusin PF04799.13 ORF56986 - 0.84 9.2 14.9 0.79 9.3 7.1 2.2 1 1 1 2 2 2 0 fzo-like conserved region DUF641 PF04859.12 ORF56986 - 0.9 9.9 19.6 0.38 11.1 10.3 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) CLZ PF16526.5 ORF56986 - 1.1 9.7 20.0 1.2 9.6 3.2 2.7 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels EzrA PF06160.12 ORF56986 - 1.3 7.1 23.4 1.8 6.7 23.4 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Spc7 PF08317.11 ORF56986 - 1.3 7.8 26.5 3.3 6.5 26.5 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF1640 PF07798.11 ORF56986 - 1.3 9.0 19.5 3.8 7.5 19.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) KASH_CCD PF14662.6 ORF56986 - 1.4 8.7 26.6 3.4 7.4 26.6 1.6 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DUF3251 PF11622.8 ORF56986 - 1.4 8.5 12.7 0.69 9.5 1.4 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3251) MutS_IV PF05190.18 ORF56986 - 1.5 9.3 12.3 1.6 9.1 0.7 3.2 2 1 1 3 3 3 0 MutS family domain IV Swi5 PF07061.11 ORF56986 - 1.6 8.9 21.6 2.1 8.5 2.1 3.3 1 1 2 3 3 3 0 Swi5 DUF5394 PF17372.2 ORF56986 - 1.6 8.2 21.2 2.6 7.5 21.2 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5394) Atg14 PF10186.9 ORF56986 - 1.7 7.7 26.8 0.088 11.9 15.2 2.0 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Jnk-SapK_ap_N PF09744.9 ORF56986 - 1.7 8.8 23.8 6.7 6.9 23.9 1.8 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 bZIP_2 PF07716.15 ORF56986 - 1.8 8.7 20.9 0.4 10.8 1.6 4.1 2 2 3 5 5 5 0 Basic region leucine zipper GldM_N PF12081.8 ORF56986 - 1.9 8.5 20.2 0.11 12.5 9.0 2.1 1 1 1 2 2 2 0 GldM N-terminal domain DUF16 PF01519.16 ORF56986 - 2 8.9 23.0 3.2 8.3 11.0 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF5082 PF16888.5 ORF56986 - 2.1 8.7 26.4 1.1e+02 3.0 26.4 3.1 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) GBP_C PF02841.14 ORF56986 - 2.1 7.7 27.3 1.3 8.4 8.2 2.0 1 1 1 2 2 2 0 Guanylate-binding protein, C-terminal domain Striatin PF08232.12 ORF56986 - 2.2 8.9 21.7 1.1 9.8 1.8 2.5 1 1 1 2 2 2 0 Striatin family HrpB7 PF09486.10 ORF56986 - 2.2 8.7 15.9 1e+02 3.2 15.9 2.8 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) CENP-H PF05837.12 ORF56986 - 2.3 8.7 22.3 2.7 8.4 13.4 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) zf-C4H2 PF10146.9 ORF56986 - 2.3 8.5 20.6 2.5 8.4 3.7 2.3 1 1 1 2 2 2 0 Zinc finger-containing protein DUF948 PF06103.11 ORF56986 - 2.5 8.4 6.0 2.3e+02 2.1 5.5 2.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) AAA_13 PF13166.6 ORF56986 - 2.7 6.5 23.7 5.7 5.5 23.7 1.5 1 1 0 1 1 1 0 AAA domain RmuC PF02646.16 ORF56986 - 2.8 7.0 19.7 0.94 8.5 8.5 2.1 2 0 0 2 2 2 0 RmuC family Fib_alpha PF08702.10 ORF56986 - 2.8 8.1 18.8 7.2 6.8 18.5 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Not1 PF04054.15 ORF56986 - 2.8 6.8 7.2 3.3 6.5 7.2 1.1 1 0 0 1 1 1 0 CCR4-Not complex component, Not1 SseC PF04888.12 ORF56986 - 3 7.4 20.7 1.9 8.0 5.6 2.1 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family DUF773 PF05600.12 ORF56986 - 3.3 6.3 24.9 0.057 12.1 7.6 2.0 1 1 1 2 2 2 0 CDK5 regulatory subunit-associated protein 3 Mt_ATP-synt_D PF05873.12 ORF56986 - 3.4 7.5 17.9 1.7 8.5 4.3 2.3 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) FlxA PF14282.6 ORF56986 - 3.5 7.7 38.5 2 8.4 9.4 3.2 1 1 2 3 3 3 0 FlxA-like protein Ax_dynein_light PF10211.9 ORF56986 - 3.7 7.5 27.6 7 6.6 14.9 2.0 1 1 1 2 2 2 0 Axonemal dynein light chain DUF3584 PF12128.8 ORF56986 - 3.8 4.9 24.9 12 3.3 25.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) TolA_bind_tri PF16331.5 ORF56986 - 3.8 7.6 20.7 0.57 10.3 5.2 2.6 1 1 0 2 2 2 0 TolA binding protein trimerisation NPV_P10 PF05531.12 ORF56986 - 4 8.0 16.0 4.4 7.9 4.1 2.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DASH_Hsk3 PF08227.11 ORF56986 - 4.3 7.8 8.2 14 6.1 1.7 3.4 3 1 0 3 3 2 0 DASH complex subunit Hsk3 like APG6_N PF17675.1 ORF56986 - 4.5 7.8 30.2 14 6.2 17.7 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region YabA PF06156.13 ORF56986 - 4.7 7.9 18.4 10 6.8 1.8 2.7 1 1 1 2 2 2 0 Initiation control protein YabA Exonuc_VII_L PF02601.15 ORF56986 - 4.7 6.7 18.2 6.5 6.2 18.2 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Vir_act_alpha_C PF10400.9 ORF56986 - 4.8 7.9 11.0 8.6 7.1 2.6 2.8 1 1 2 3 3 3 0 Virulence activator alpha C-term CDC37_N PF03234.14 ORF56986 - 5.2 8.0 19.9 3.3 8.6 16.2 1.9 1 1 1 2 2 2 0 Cdc37 N terminal kinase binding DUF848 PF05852.11 ORF56986 - 5.6 7.1 16.2 4.3 7.4 9.2 2.1 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) DUF812 PF05667.11 ORF56986 - 5.6 5.7 26.9 97 1.6 26.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF812) PRKG1_interact PF15898.5 ORF56986 - 6.7 7.7 22.8 2.5 9.1 3.2 2.7 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Prefoldin PF02996.17 ORF56986 - 8.2 6.4 22.9 1.3 9.0 2.8 3.1 1 1 1 3 3 3 0 Prefoldin subunit DUF4282 PF14110.6 ORF56244 - 0.0095 16.7 0.1 0.017 15.8 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4282) Tim17 PF02466.19 ORF56244 - 0.098 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family Rhomboid_SP PF12595.8 ORF56089 - 0.083 12.2 2.2 0.096 12.0 2.2 1.2 1 0 0 1 1 1 0 Rhomboid serine protease GST_C_3 PF14497.6 ORF55547 - 2.9e-08 33.8 0.0 3.9e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF55547 - 3.1e-05 24.1 0.0 4.5e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF55547 - 0.002 18.1 0.0 0.0024 17.9 0.0 1.4 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain SNAP PF14938.6 ORF55179 - 1.4e-29 103.4 6.8 1.7e-29 103.1 6.8 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP Spatacsin_C PF14649.6 ORF55179 - 2.9e-05 23.3 2.0 3.4e-05 23.1 2.0 1.1 1 0 0 1 1 1 1 Spatacsin C-terminus DHR-2 PF06920.13 ORF55179 - 0.00077 18.2 0.8 0.00077 18.2 0.8 1.5 1 1 0 1 1 1 1 Dock homology region 2 AviRa PF11599.8 ORF55179 - 0.024 14.1 0.4 0.026 14.0 0.4 1.2 1 0 0 1 1 1 0 RRNA methyltransferase AviRa Turandot PF07240.11 ORF55179 - 0.095 12.7 0.5 0.095 12.7 0.5 2.1 3 0 0 3 3 3 0 Stress-inducible humoral factor Turandot TPR_7 PF13176.6 ORF55179 - 0.3 11.2 5.2 24 5.3 0.0 3.7 2 1 2 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF55179 - 0.4 10.9 6.1 2.8 8.3 2.2 3.4 3 1 1 4 4 4 0 Tetratricopeptide repeat Ribosomal_L27e PF01777.18 ORF55179 - 0.73 10.2 3.8 14 6.1 0.3 3.0 2 2 0 2 2 2 0 Ribosomal L27e protein family TPR_8 PF13181.6 ORF55179 - 0.77 10.1 9.4 1.1 9.6 1.9 3.6 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF55179 - 2.9 7.9 6.6 21 5.1 1.4 3.3 3 1 0 3 3 3 0 Tetratricopeptide repeat RR_TM4-6 PF06459.12 ORF53725 - 0.58 9.9 15.5 0.69 9.7 15.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF2151 PF10221.9 ORF53725 - 0.88 8.1 12.9 1 7.9 12.9 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator IHABP4_N PF16174.5 ORF53725 - 1.5 9.4 20.4 2 9.0 20.4 1.1 1 0 0 1 1 1 0 Intracellular hyaluronan-binding protein 4 N-terminal SOBP PF15279.6 ORF53725 - 1.8 9.1 20.0 2.1 8.9 20.0 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein XRN_M PF17846.1 ORF53725 - 2.8 6.8 9.2 3.2 6.6 9.2 1.0 1 0 0 1 1 1 0 Xrn1 helical domain Presenilin PF01080.17 ORF53725 - 3.9 6.1 14.0 4.5 5.9 14.0 1.1 1 0 0 1 1 1 0 Presenilin DUF3807 PF12720.7 ORF53725 - 4.8 7.4 16.9 6 7.1 16.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Mitofilin PF09731.9 ORF53725 - 5.4 5.7 19.8 6.3 5.5 19.8 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein PIEZO PF15917.5 ORF53725 - 6.2 6.2 13.9 7.3 6.0 13.9 1.1 1 0 0 1 1 1 0 Piezo Neur_chan_memb PF02932.16 ORF53725 - 7.3 6.6 11.1 9 6.3 11.1 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region O-antigen_lig PF13425.6 ORF53725 - 7.7 5.2 8.8 8.6 5.0 8.8 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Zip PF02535.22 ORF53725 - 7.8 5.6 8.1 9 5.4 8.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF1035 PF06281.12 ORF52294 - 0.076 13.0 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1035) ABC2_membrane_3 PF12698.7 ORF52294 - 0.78 8.8 5.4 1.2 8.2 5.4 1.3 1 0 0 1 1 1 0 ABC-2 family transporter protein Mer2 PF09074.10 ORF52157 - 0.048 13.5 4.7 0.05 13.4 4.1 1.4 1 1 0 1 1 1 0 Mer2 MRP-S32 PF10210.9 ORF52157 - 0.21 12.2 3.2 0.12 13.0 1.1 1.5 2 0 0 2 2 2 0 Mitochondrial 28S ribosomal protein S32 zf-C2H2 PF00096.26 ORF50533 - 0.0013 19.1 1.2 0.0032 17.8 1.2 1.8 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF50533 - 0.0021 18.4 0.7 0.0021 18.4 0.7 2.6 2 1 0 2 2 2 1 Zinc-finger double domain DUF1977 PF09320.11 ORF50533 - 0.03 14.6 0.3 0.03 14.6 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1977) zf-C2H2_4 PF13894.6 ORF50533 - 0.071 14.0 1.5 0.25 12.3 1.0 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger Cas_CT1975 PF09344.10 ORF49118 - 0.031 13.8 1.6 0.033 13.7 1.6 1.0 1 0 0 1 1 1 0 CT1975-like protein DUF4878 PF12870.7 ORF49118 - 0.8 10.0 8.2 0.16 12.3 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4878) Gal_Lectin PF02140.18 ORF48888 - 0.27 11.7 4.3 0.52 10.8 1.2 2.1 1 1 1 2 2 2 0 Galactose binding lectin domain FAD_SOX PF18371.1 ORF48888 - 0.67 10.3 4.1 1 9.8 0.5 2.4 1 1 1 2 2 2 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase Lipocalin_5 PF13924.6 ORF47698 - 0.052 13.3 0.8 0.084 12.7 0.3 1.6 2 0 0 2 2 2 0 Lipocalin-like domain SM-ATX PF14438.6 ORF47660 - 0.01 15.9 0.4 0.019 15.1 0.4 1.4 1 0 0 1 1 1 0 Ataxin 2 SM domain O-antigen_lig PF13425.6 ORF47615 - 3.3 6.4 6.9 4.3 6.0 6.9 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein zf-RING_2 PF13639.6 ORF47530 - 4.7e-07 30.0 1.8 4.7e-07 30.0 1.8 2.2 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF47530 - 0.00025 20.7 6.5 0.00068 19.3 6.5 1.8 1 1 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF47530 - 0.00053 20.2 3.9 0.00053 20.2 3.9 2.6 2 1 0 2 2 2 1 RING-H2 zinc finger domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks175.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks175.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks175.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks175.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4648 PF15505.6 ORF46710 - 0.046 14.6 0.6 0.088 13.7 0.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4648) Prominin PF05478.11 ORF45622 - 3 5.7 5.5 3 5.7 5.5 1.0 1 0 0 1 1 1 0 Prominin Ribosomal_S4e PF00900.20 ORF45603 - 0.028 14.3 0.5 0.049 13.5 0.5 1.4 1 0 0 1 1 1 0 Ribosomal family S4e FidL_like PF15941.5 ORF45603 - 1.2 9.7 4.8 2.5 8.6 1.8 2.1 2 0 0 2 2 2 0 FidL-like putative membrane protein Aa_trans PF01490.18 ORF4529 - 1.5e-14 53.5 1.5 1.8e-14 53.3 1.5 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF808 PF05661.12 ORF4529 - 0.1 11.6 1.0 3.6 6.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF808) DUF202 PF02656.15 ORF4529 - 0.19 12.2 4.6 0.38 11.2 4.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF3040 PF11239.8 ORF4529 - 0.25 11.6 3.4 8.9 6.7 0.7 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF3040) Phage_holin_3_6 PF07332.11 ORF4529 - 5.4 7.1 8.0 4.2 7.4 6.7 1.4 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III ATP-gua_Ptrans PF00217.19 ORF45195 - 7.9e-08 32.0 0.1 1e-07 31.7 0.1 1.1 1 0 0 1 1 1 1 ATP:guanido phosphotransferase, C-terminal catalytic domain LpxC PF03331.13 ORF45007 - 3.3e-43 148.1 0.1 3.8e-43 147.9 0.1 1.0 1 0 0 1 1 1 1 UDP-3-O-acyl N-acetylglycosamine deacetylase WD40_3 PF15911.5 ORF44157 - 0.038 14.0 0.5 0.28 11.2 0.0 2.4 3 0 0 3 3 3 0 WD domain, G-beta repeat Phage_tail_T PF06223.12 ORF43819 - 0.1 13.1 0.0 0.14 12.7 0.0 1.3 1 0 0 1 1 1 0 Minor tail protein T Ribosomal_S11 PF00411.19 ORF43809 - 5.2e-44 149.1 1.3 6.2e-44 148.9 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 PV-1 PF06637.11 ORF43517 - 0.0055 15.6 1.2 0.0063 15.4 1.2 1.1 1 0 0 1 1 1 1 PV-1 protein (PLVAP) SYCE1 PF15233.6 ORF43231 - 0.013 15.6 14.3 0.022 14.8 14.3 1.4 1 1 0 1 1 1 0 Synaptonemal complex central element protein 1 DUF773 PF05600.12 ORF43231 - 0.082 11.6 10.7 0.1 11.3 10.7 1.1 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 CENP-F_leu_zip PF10473.9 ORF43231 - 0.18 11.8 17.3 0.66 10.0 11.2 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FAM76 PF16046.5 ORF43231 - 1.1 8.6 11.8 0.61 9.4 10.0 1.5 1 1 0 1 1 1 0 FAM76 protein Macoilin PF09726.9 ORF43231 - 1.1 7.7 15.8 1.3 7.5 7.9 2.0 1 1 1 2 2 2 0 Macoilin family zf-C4H2 PF10146.9 ORF43231 - 1.3 9.3 14.7 1.5 9.1 14.7 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein BST2 PF16716.5 ORF43231 - 1.4 9.5 12.0 4.6 7.9 1.0 2.2 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 LMBR1 PF04791.16 ORF43231 - 1.7 7.5 9.3 1.9 7.3 9.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein WDCP PF15390.6 ORF43231 - 1.7 6.9 10.0 2.1 6.6 10.0 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Exonuc_VII_L PF02601.15 ORF43231 - 1.8 8.1 8.5 2.1 7.8 8.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Spc24 PF08286.11 ORF43231 - 3.2 8.0 14.1 12 6.2 6.9 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 PRP1_N PF06424.12 ORF43231 - 4.7 7.6 7.2 3 8.2 2.7 2.1 1 1 0 2 2 2 0 PRP1 splicing factor, N-terminal APG6_N PF17675.1 ORF43231 - 4.9 7.7 13.6 4.3 7.9 6.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Ly49 PF08391.10 ORF43231 - 5.3 7.4 11.6 4.8 7.6 8.5 2.0 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region DUF1664 PF07889.12 ORF43231 - 8.2 6.5 13.7 12 6.0 1.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Gamma_PGA_hydro PF05908.11 ORF42161 - 0.00016 21.1 0.3 0.00022 20.7 0.3 1.3 1 0 0 1 1 1 1 Poly-gamma-glutamate hydrolase Cas_CT1975 PF09344.10 ORF41836 - 0.031 13.8 1.6 0.033 13.7 1.6 1.0 1 0 0 1 1 1 0 CT1975-like protein DUF4878 PF12870.7 ORF41836 - 0.8 10.0 8.2 0.16 12.3 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4878) SYCE1 PF15233.6 ORF41535 - 0.013 15.6 14.3 0.022 14.8 14.3 1.4 1 1 0 1 1 1 0 Synaptonemal complex central element protein 1 DUF773 PF05600.12 ORF41535 - 0.082 11.6 10.7 0.1 11.3 10.7 1.1 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 CENP-F_leu_zip PF10473.9 ORF41535 - 0.18 11.8 17.3 0.66 10.0 11.2 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FAM76 PF16046.5 ORF41535 - 1.1 8.6 11.8 0.61 9.4 10.0 1.5 1 1 0 1 1 1 0 FAM76 protein Macoilin PF09726.9 ORF41535 - 1.1 7.7 15.8 1.3 7.5 7.9 2.0 1 1 1 2 2 2 0 Macoilin family zf-C4H2 PF10146.9 ORF41535 - 1.3 9.3 14.7 1.5 9.1 14.7 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein BST2 PF16716.5 ORF41535 - 1.4 9.5 12.0 4.6 7.9 1.0 2.2 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 LMBR1 PF04791.16 ORF41535 - 1.7 7.5 9.3 1.9 7.3 9.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein WDCP PF15390.6 ORF41535 - 1.7 6.9 10.0 2.1 6.6 10.0 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Exonuc_VII_L PF02601.15 ORF41535 - 1.8 8.1 8.5 2.1 7.8 8.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Spc24 PF08286.11 ORF41535 - 3.2 8.0 14.1 12 6.2 6.9 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 PRP1_N PF06424.12 ORF41535 - 4.7 7.6 7.2 3 8.2 2.7 2.1 1 1 0 2 2 2 0 PRP1 splicing factor, N-terminal APG6_N PF17675.1 ORF41535 - 4.9 7.7 13.6 4.3 7.9 6.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Ly49 PF08391.10 ORF41535 - 5.3 7.4 11.6 4.8 7.6 8.5 2.0 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region DUF1664 PF07889.12 ORF41535 - 8.2 6.5 13.7 12 6.0 1.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) US10 PF17617.2 ORF41171 - 0.11 12.6 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Viral unique short region 10 FmiP_Thoc5 PF09766.9 ORF40834 - 0.011 15.0 1.1 0.011 15.0 1.1 1.7 1 1 1 2 2 2 0 Fms-interacting protein/Thoc5 BCL_N PF04714.13 ORF40834 - 0.16 12.0 0.4 0.16 12.0 0.4 2.3 2 1 0 2 2 2 0 BCL7, N-terminal conserver region XhlA PF10779.9 ORF40834 - 0.22 11.7 2.5 0.32 11.2 0.1 2.3 2 1 0 2 2 2 0 Haemolysin XhlA DUF1664 PF07889.12 ORF40834 - 0.41 10.7 3.7 0.15 12.1 0.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF3347 PF11827.8 ORF40834 - 1.5 9.0 5.9 2.2 8.4 5.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3347) BamHI PF02923.15 ORF4021 - 0.093 12.5 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 Restriction endonuclease BamHI MOSC PF03473.17 ORF39741 - 6.6e-08 32.6 0.0 8.9e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 MOSC domain Spermine_synt_N PF17284.2 ORF39621 - 0.15 11.9 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Spermidine synthase tetramerisation domain RE_Bsp6I PF09504.10 ORF38860 - 0.11 12.1 1.0 0.27 10.8 1.0 1.7 1 1 0 1 1 1 0 Bsp6I restriction endonuclease Palm_thioest PF02089.15 ORF38860 - 0.14 12.0 0.7 0.16 11.8 0.7 1.0 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF3138 PF11336.8 ORF38742 - 8 5.0 9.0 7.6 5.0 8.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3138) DUF1472 PF07339.12 ORF38710 - 0.034 14.7 0.1 0.046 14.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1472) DUF3565 PF12088.8 ORF38611 - 1.1 9.3 6.5 0.31 11.0 2.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3565) ROK PF00480.20 ORF37897 - 0.00015 21.3 0.0 0.00019 21.0 0.0 1.1 1 0 0 1 1 1 1 ROK family LAM_C PF12544.8 ORF37690 - 0.18 12.0 1.4 0.21 11.8 1.4 1.1 1 0 0 1 1 1 0 Lysine-2,3-aminomutase PALP PF00291.25 ORF37007 - 0.0055 16.1 0.1 0.0066 15.9 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Ribosomal_L6 PF00347.23 ORF36996 - 6.5e-13 49.2 0.0 1.9e-09 38.1 0.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Rotamase PF00639.21 ORF36523 - 1.6e-24 86.6 0.1 3.5e-24 85.6 0.0 1.6 2 0 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF36523 - 2.1e-24 86.3 0.0 3.9e-24 85.4 0.0 1.4 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF36523 - 1e-07 32.8 0.3 2e-07 31.9 0.1 1.6 1 1 1 2 2 2 1 PPIC-type PPIASE domain SNAP PF14938.6 ORF36284 - 1.4e-29 103.4 6.8 1.7e-29 103.1 6.8 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP Spatacsin_C PF14649.6 ORF36284 - 2.9e-05 23.3 2.0 3.4e-05 23.1 2.0 1.1 1 0 0 1 1 1 1 Spatacsin C-terminus DHR-2 PF06920.13 ORF36284 - 0.00077 18.2 0.8 0.00077 18.2 0.8 1.5 1 1 0 1 1 1 1 Dock homology region 2 AviRa PF11599.8 ORF36284 - 0.024 14.1 0.4 0.026 14.0 0.4 1.2 1 0 0 1 1 1 0 RRNA methyltransferase AviRa Turandot PF07240.11 ORF36284 - 0.095 12.7 0.5 0.095 12.7 0.5 2.1 3 0 0 3 3 3 0 Stress-inducible humoral factor Turandot TPR_7 PF13176.6 ORF36284 - 0.3 11.2 5.2 24 5.3 0.0 3.7 2 1 2 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF36284 - 0.4 10.9 6.1 2.8 8.3 2.2 3.4 3 1 1 4 4 4 0 Tetratricopeptide repeat Ribosomal_L27e PF01777.18 ORF36284 - 0.73 10.2 3.8 14 6.1 0.3 3.0 2 2 0 2 2 2 0 Ribosomal L27e protein family TPR_8 PF13181.6 ORF36284 - 0.77 10.1 9.4 1.1 9.6 1.9 3.6 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF36284 - 2.9 7.9 6.6 21 5.1 1.4 3.3 3 1 0 3 3 3 0 Tetratricopeptide repeat SM-ATX PF14438.6 ORF36249 - 0.01 15.9 0.4 0.019 15.1 0.4 1.4 1 0 0 1 1 1 0 Ataxin 2 SM domain HTH_3 PF01381.22 ORF35951 - 1.5e-10 40.9 0.0 7.1e-10 38.8 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 ORF35951 - 2.5e-06 27.4 0.3 6.2e-06 26.1 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_17 PF12728.7 ORF35951 - 0.0015 18.6 0.1 0.006 16.7 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 ORF35951 - 0.0032 17.8 0.0 0.012 15.9 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_30 PF13556.6 ORF35951 - 0.014 15.2 1.4 0.023 14.5 0.4 2.0 2 1 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Sigma54_DBD PF04552.13 ORF35951 - 0.017 14.8 0.6 0.021 14.5 0.0 1.5 2 0 0 2 2 2 0 Sigma-54, DNA binding domain UPF0122 PF04297.14 ORF35951 - 0.033 14.4 0.7 0.084 13.1 0.7 1.8 1 1 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_26 PF13443.6 ORF35951 - 0.037 14.5 0.1 0.19 12.2 0.0 2.1 1 1 1 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 ORF35951 - 0.069 13.1 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain LacI PF00356.21 ORF35951 - 0.092 12.6 0.1 0.26 11.1 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family MarR_2 PF12802.7 ORF35951 - 0.1 12.5 0.0 0.22 11.4 0.0 1.7 1 1 0 1 1 1 0 MarR family YdaS_antitoxin PF15943.5 ORF35951 - 0.11 12.4 0.0 0.24 11.3 0.0 1.7 1 1 1 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT fn3_2 PF16893.5 ORF34971 - 0.11 12.7 0.7 0.15 12.2 0.7 1.4 1 0 0 1 1 1 0 Fibronectin type III domain DUF1180 PF06679.12 ORF34652 - 0.81 10.1 3.6 0.97 9.8 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) BLOC1_2 PF10046.9 ORF34047 - 0.00017 21.8 9.8 0.00017 21.8 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_TATA_bd PF12325.8 ORF34047 - 0.0052 17.0 10.8 0.29 11.4 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding GAS PF13851.6 ORF34047 - 0.015 14.6 13.1 0.014 14.7 12.1 1.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF34047 - 0.017 12.7 6.9 0.02 12.4 6.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Spc7 PF08317.11 ORF34047 - 0.017 14.0 9.4 0.022 13.6 9.4 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Leu_zip PF15294.6 ORF34047 - 0.019 14.5 10.1 0.023 14.2 10.1 1.1 1 0 0 1 1 1 0 Leucine zipper Baculo_PEP_C PF04513.12 ORF34047 - 0.025 14.6 6.6 0.032 14.3 6.6 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Vps53_N PF04100.12 ORF34047 - 0.029 13.3 7.1 0.011 14.7 4.3 1.5 1 1 0 1 1 1 0 Vps53-like, N-terminal DUF1664 PF07889.12 ORF34047 - 0.049 13.7 9.6 0.37 10.8 4.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) ZnuA PF01297.17 ORF34047 - 0.062 12.7 1.5 0.081 12.3 1.5 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic PRKG1_interact PF15898.5 ORF34047 - 0.073 14.0 7.0 0.58 11.1 0.5 2.3 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain CEP63 PF17045.5 ORF34047 - 0.088 12.7 9.6 0.47 10.3 9.5 1.8 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa ATG16 PF08614.11 ORF34047 - 0.1 12.8 8.5 1.2 9.3 1.1 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIC PF04977.15 ORF34047 - 0.11 12.3 9.3 1.6 8.5 1.5 2.5 1 1 1 2 2 2 0 Septum formation initiator Tuberin PF03542.16 ORF34047 - 0.11 11.6 3.2 0.12 11.5 3.2 1.0 1 0 0 1 1 1 0 Tuberin RasGAP_C PF03836.15 ORF34047 - 0.2 11.8 8.6 2.5 8.2 2.8 2.1 1 1 1 2 2 2 0 RasGAP C-terminus TSNAXIP1_N PF15739.5 ORF34047 - 0.21 12.0 7.7 0.14 12.6 0.7 2.3 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus Fib_alpha PF08702.10 ORF34047 - 0.22 11.7 11.2 3.3 7.9 0.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Macoilin PF09726.9 ORF34047 - 0.24 9.9 8.6 0.35 9.4 8.6 1.2 1 0 0 1 1 1 0 Macoilin family Spc24 PF08286.11 ORF34047 - 0.26 11.5 10.8 55 4.1 10.8 2.2 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 TMPIT PF07851.13 ORF34047 - 0.32 10.2 7.2 0.17 11.1 4.8 1.5 1 1 1 2 2 2 0 TMPIT-like protein Tup_N PF08581.10 ORF34047 - 0.35 11.2 10.0 4.7 7.6 1.0 2.2 1 1 1 2 2 2 0 Tup N-terminal BPL_N PF09825.9 ORF34047 - 0.61 9.1 4.8 0.69 8.9 4.8 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal Csm2_III-A PF03750.13 ORF34047 - 0.73 10.7 5.8 0.61 10.9 2.2 2.0 1 1 1 2 2 2 0 Csm2 Type III-A FlaC_arch PF05377.11 ORF34047 - 1 9.8 13.4 3.5 8.1 0.8 3.5 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) UPF0242 PF06785.11 ORF34047 - 1 9.4 10.4 1.3 9.1 10.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5595 PF18077.1 ORF34047 - 1.6 8.9 8.2 1.9 8.6 2.4 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5595) USP8_interact PF08941.10 ORF34047 - 1.8 8.3 8.7 0.29 10.9 0.7 2.0 1 1 1 2 2 2 0 USP8 interacting NPV_P10 PF05531.12 ORF34047 - 3.5 8.2 10.5 4.4 7.8 6.8 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 ORF34047 - 5.7 7.6 10.9 4.4e+02 1.6 10.9 2.2 1 1 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF34047 - 6.3 7.5 7.9 14 6.4 3.1 2.5 1 1 2 3 3 3 0 SlyX SMI1_KNR4 PF09346.10 ORF32993 - 0.024 15.0 0.0 0.031 14.7 0.0 1.1 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) DUF2457 PF10446.9 ORF32986 - 3.6 6.6 12.6 4 6.5 12.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Herpes_UL20 PF04544.12 ORF31030 - 0.071 13.5 4.0 0.087 13.2 4.0 1.1 1 0 0 1 1 1 0 Herpesvirus egress protein UL20 RRM_2 PF04059.12 ORF30913 - 0.02 15.1 0.0 0.025 14.8 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif 2 Peptidase_S10 PF00450.22 ORF30680 - 9.6e-13 48.3 0.0 1.1e-12 48.1 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase DUF3841 PF12952.7 ORF30434 - 9.7e-05 22.2 0.3 0.00012 21.9 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3841) UvrB_inter PF17757.1 ORF30434 - 0.068 13.4 0.4 0.11 12.7 0.4 1.4 1 0 0 1 1 1 0 UvrB interaction domain PHA_synth_III_E PF09712.10 ORF29198 - 0.015 14.4 0.5 0.019 14.1 0.5 1.1 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) LETM1 PF07766.13 ORF29198 - 0.029 13.7 2.8 0.038 13.3 2.8 1.2 1 0 0 1 1 1 0 LETM1-like protein MitMem_reg PF13012.6 ORF29198 - 0.057 13.8 0.4 0.083 13.3 0.4 1.2 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function LMBR1 PF04791.16 ORF29198 - 0.97 8.3 3.2 1.1 8.1 3.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Proteasome PF00227.26 ORF28729 - 1.1e-27 96.8 0.2 1.2e-27 96.6 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit FAM167 PF11652.8 ORF28729 - 0.074 13.5 0.5 0.13 12.8 0.5 1.5 1 1 0 1 1 1 0 FAM167 Trp_oprn_chp PF09534.10 ORF28315 - 0.0086 15.9 0.1 0.011 15.5 0.1 1.1 1 0 0 1 1 1 1 Tryptophan-associated transmembrane protein (Trp_oprn_chp) RskA PF10099.9 ORF28315 - 0.029 14.7 5.2 0.12 12.7 5.2 1.8 1 1 0 1 1 1 0 Anti-sigma-K factor rskA Ank_4 PF13637.6 ORF25992 - 1.1e-14 54.6 0.1 1.3e-12 47.9 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF25992 - 7.7e-11 42.0 0.0 4.5e-08 33.2 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF25992 - 8.9e-11 42.2 0.1 2.2e-10 41.0 0.1 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF25992 - 3.4e-10 39.9 0.0 1.6e-05 25.1 0.0 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF25992 - 8.5e-06 25.7 0.0 0.00022 21.4 0.0 2.8 3 1 0 3 3 3 1 Ankyrin repeat PAN_3 PF08277.12 ORF25321 - 0.0023 17.7 0.7 0.0051 16.6 0.7 1.5 1 0 0 1 1 1 1 PAN-like domain PAN_2 PF08276.11 ORF25321 - 0.0069 16.5 1.7 0.0069 16.5 1.7 1.9 2 0 0 2 2 2 1 PAN-like domain Luteo_P1-P2 PF08467.10 ORF25236 - 0.062 12.6 0.0 0.068 12.4 0.0 1.0 1 0 0 1 1 1 0 Luteovirus RNA polymerase P1-P2/replicase zf-C2HC PF01530.18 ORF24446 - 4.5 7.6 8.1 9.5 6.5 0.3 2.9 3 0 0 3 3 3 0 Zinc finger, C2HC type TadE PF07811.12 ORF23554 - 0.083 13.2 0.0 0.16 12.3 0.0 1.5 1 0 0 1 1 1 0 TadE-like protein Complex1_LYR PF05347.15 ORF23262 - 0.00063 19.7 0.0 0.0012 18.8 0.0 1.5 1 0 0 1 1 1 1 Complex 1 protein (LYR family) RD3 PF14473.6 ORF23262 - 0.012 15.5 0.1 0.021 14.7 0.1 1.4 1 1 0 1 1 1 0 RD3 protein GST_C_3 PF14497.6 ORF23186 - 2.3e-10 40.6 0.4 3.2e-10 40.1 0.4 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF23186 - 0.00031 20.9 0.1 0.00044 20.4 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain VirE PF05272.11 ORF23186 - 0.022 14.5 0.2 5.2 6.7 0.0 2.0 1 1 1 2 2 2 0 Virulence-associated protein E ADIP PF11559.8 ORF23164 - 0.013 15.6 10.0 0.041 14.0 9.0 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Helo_like_N PF17111.5 ORF23164 - 0.028 13.8 5.3 0.034 13.5 5.3 1.2 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins DUF1664 PF07889.12 ORF23164 - 0.086 12.9 8.1 0.21 11.6 6.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Sec5 PF15469.6 ORF23164 - 0.097 12.5 6.9 0.13 12.1 0.1 2.0 1 1 1 2 2 2 0 Exocyst complex component Sec5 PKcGMP_CC PF16808.5 ORF23164 - 0.22 11.4 6.3 0.58 10.1 2.4 2.7 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Tho2 PF11262.8 ORF23164 - 0.34 10.1 5.5 0.41 9.8 5.5 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Ly49 PF08391.10 ORF23164 - 0.48 10.8 5.2 1.6 9.1 5.2 1.8 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region Cnn_1N PF07989.11 ORF23164 - 1 9.6 9.4 68 3.7 9.4 2.3 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF5373 PF17343.2 ORF22957 - 1.9 8.3 15.5 2.6 7.9 15.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5373) S_layer_N PF05123.12 ORF22505 - 0.056 13.3 2.8 0.059 13.2 2.8 1.0 1 0 0 1 1 1 0 S-layer like family, N-terminal region fn3_2 PF16893.5 ORF22222 - 0.11 12.7 0.7 0.15 12.2 0.7 1.4 1 0 0 1 1 1 0 Fibronectin type III domain PSI_PsaE PF02427.17 ORF21185 - 3.9e-24 84.1 1.3 5.2e-24 83.7 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE RNA_pol_Rpb5_C PF01191.19 ORF20738 - 0.0013 18.6 0.7 0.0031 17.3 0.7 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain Cmc1 PF08583.10 ORF20738 - 0.0071 16.3 0.1 0.011 15.7 0.1 1.3 1 0 0 1 1 1 1 Cytochrome c oxidase biogenesis protein Cmc1 like DUF496 PF04363.12 ORF19252 - 4e-46 155.0 7.4 6.1e-46 154.4 7.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF496) Rad10 PF03834.14 ORF18993 - 0.024 14.7 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) DUF4282 PF14110.6 ORF17466 - 0.0095 16.7 0.1 0.017 15.8 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4282) Tim17 PF02466.19 ORF17466 - 0.098 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family Ank_5 PF13857.6 ORF1682 - 4.7e-06 26.8 0.3 4.7e-06 26.8 0.3 1.6 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF1682 - 0.00087 19.8 0.0 0.0017 18.9 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF1682 - 0.0033 18.0 0.1 0.0043 17.6 0.1 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF1682 - 0.0065 16.9 0.0 0.015 15.8 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeat SNARE_assoc PF09335.11 ORF14050 - 1.2e-11 45.1 3.3 1e-07 32.4 2.0 2.1 2 0 0 2 2 2 2 SNARE associated Golgi protein DUF3139 PF11337.8 ORF14050 - 0.0058 17.3 0.3 0.011 16.4 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3139) FtsL PF04999.13 ORF14050 - 0.068 13.2 0.1 0.12 12.4 0.0 1.4 1 1 0 1 1 1 0 Cell division protein FtsL DUF3365 PF11845.8 ORF13024 - 0.021 15.2 0.0 0.027 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3365) SpoOE-like PF09388.10 ORF12269 - 0.087 12.7 0.1 3.2 7.7 0.0 2.5 2 0 0 2 2 2 0 Spo0E like sporulation regulatory protein FAINT PF04385.15 ORF12269 - 0.29 11.2 7.4 1.2 9.3 7.4 2.1 1 1 0 1 1 1 0 Domain of unknown function, DUF529 Shisa PF13908.6 ORF11678 - 5.2e-07 30.1 0.8 6.1e-07 29.9 0.8 1.0 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Cadherin_C_2 PF16492.5 ORF11678 - 0.00039 21.1 0.5 0.00048 20.8 0.5 1.3 1 1 0 1 1 1 1 Cadherin cytoplasmic C-terminal FAM163 PF15069.6 ORF11678 - 0.0038 17.7 0.7 0.0051 17.3 0.7 1.2 1 0 0 1 1 1 1 FAM163 family TMEM154 PF15102.6 ORF11678 - 0.0057 16.6 1.8 0.0065 16.4 0.1 1.8 1 1 1 2 2 2 1 TMEM154 protein family Vps36-NZF-N PF16988.5 ORF11678 - 0.023 14.1 1.5 0.063 12.7 1.5 1.7 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain AJAP1_PANP_C PF15298.6 ORF11678 - 0.045 14.0 0.4 0.045 14.0 0.4 1.9 1 1 1 2 2 2 0 AJAP1/PANP C-terminus Insulin_TMD PF17870.1 ORF11678 - 0.047 13.8 0.3 0.08 13.0 0.3 1.3 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment ETRAMP PF09716.10 ORF11678 - 0.062 13.4 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) EphA2_TM PF14575.6 ORF11678 - 0.067 14.1 0.5 0.09 13.7 0.5 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Ly49 PF08391.10 ORF11678 - 0.12 12.7 1.0 0.19 12.1 1.0 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region DUF3481 PF11980.8 ORF11678 - 0.16 11.7 1.6 0.25 11.1 1.6 1.2 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein DUF4834 PF16118.5 ORF11678 - 0.2 12.6 0.7 0.42 11.6 0.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DUF3069 PF11269.8 ORF112335 - 0.029 14.6 0.8 0.038 14.2 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3069) Lys-AminoMut_A PF09043.11 ORF112335 - 0.03 12.8 0.0 0.032 12.7 0.0 1.1 1 0 0 1 1 1 0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit DUF5344 PF17279.2 ORF112267 - 0.011 16.4 10.6 0.44 11.2 2.3 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5344) YusW PF14039.6 ORF112267 - 0.39 11.3 8.2 0.17 12.4 3.2 2.0 1 1 1 2 2 2 0 YusW-like protein DUF4665 PF15679.5 ORF112267 - 6.8 7.4 14.6 0.55 10.9 3.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4665) EF-hand_8 PF13833.6 ORF111680 - 4.8e-07 29.5 1.5 2.5e-05 24.0 1.2 3.0 2 1 0 2 2 2 1 EF-hand domain pair UPF0154 PF03672.13 ORF111680 - 3.7e-05 23.7 0.1 0.00052 20.0 0.1 2.1 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0154) EF-hand_7 PF13499.6 ORF111680 - 0.0011 19.3 0.5 0.0037 17.7 0.1 1.9 2 1 0 2 2 2 1 EF-hand domain pair DUF2000 PF09391.10 ORF111680 - 0.031 14.2 0.0 0.088 12.7 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2000) RNA_pol_Rpb4 PF03874.16 ORF111680 - 0.083 13.2 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb4 JmjN PF02375.17 ORF111680 - 0.13 12.2 0.1 0.46 10.5 0.0 2.0 2 0 0 2 2 2 0 jmjN domain DUF3008 PF11450.8 ORF111680 - 0.2 11.9 1.9 0.54 10.5 0.6 2.1 2 0 0 2 2 2 0 Protein of unknwon function (DUF3008) UPF0561 PF10573.9 ORF111484 - 0.035 14.2 1.4 0.044 13.9 1.4 1.3 1 1 0 1 1 1 0 Uncharacterised protein family UPF0561 PHA_synth_III_E PF09712.10 ORF109965 - 0.015 14.4 0.5 0.019 14.1 0.5 1.1 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) LETM1 PF07766.13 ORF109965 - 0.029 13.7 2.8 0.038 13.3 2.8 1.2 1 0 0 1 1 1 0 LETM1-like protein MitMem_reg PF13012.6 ORF109965 - 0.057 13.8 0.4 0.083 13.3 0.4 1.2 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function LMBR1 PF04791.16 ORF109965 - 0.97 8.3 3.2 1.1 8.1 3.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein TM1506 PF08973.10 ORF107242 - 0.12 12.0 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1893) MRP-L47 PF06984.13 ORF106149 - 9.1e-24 83.4 0.7 1.2e-23 83.1 0.7 1.2 1 0 0 1 1 1 1 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) Ribosomal_L29 PF00831.23 ORF106149 - 1.2e-05 25.1 0.3 3.9e-05 23.5 0.3 1.9 1 1 0 1 1 1 1 Ribosomal L29 protein Asp PF00026.23 ORF105661 - 4.8e-05 22.9 0.0 5.9e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Ribosomal_S17e PF00833.18 ORF105472 - 3.9e-61 204.4 3.3 4.4e-61 204.2 3.3 1.0 1 0 0 1 1 1 1 Ribosomal S17 HTH_Tnp_1_2 PF13022.6 ORF105472 - 0.052 13.7 0.3 2.9 8.1 0.0 2.6 1 1 2 3 3 3 0 Helix-turn-helix of insertion element transposase DinB_2 PF12867.7 ORF105472 - 0.13 12.7 0.0 0.17 12.4 0.0 1.1 1 0 0 1 1 1 0 DinB superfamily ABC_tran PF00005.27 ORF105386 - 5.7e-08 33.4 0.0 8.1e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF105386 - 2.5e-05 23.9 0.0 3.2e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF105386 - 0.0061 16.4 0.0 0.0085 15.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF4132 PF13569.6 ORF105386 - 0.11 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4132) SbcCD_C PF13558.6 ORF105386 - 0.22 11.8 1.5 0.9 9.8 1.5 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit CD45 PF12567.8 ORF105089 - 0.25 11.3 1.1 2.4 8.2 0.4 2.2 2 0 0 2 2 2 0 Leukocyte receptor CD45 EF-hand_7 PF13499.6 ORF104807 - 6.2e-07 29.8 1.9 1e-06 29.1 1.9 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF104807 - 1.1e-06 28.0 3.7 0.00036 20.2 0.4 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF104807 - 2.1e-06 27.0 0.1 8.2e-06 25.1 0.2 2.1 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF104807 - 0.00016 21.0 4.1 0.0015 17.9 0.3 2.5 2 0 0 2 2 2 1 EF hand MRP-S26 PF14943.6 ORF104807 - 0.00077 19.4 2.0 0.00077 19.4 2.0 1.4 2 0 0 2 2 2 1 Mitochondrial ribosome subunit S26 EF-hand_8 PF13833.6 ORF104807 - 0.0033 17.2 1.1 0.021 14.7 0.2 2.2 1 1 1 2 2 2 1 EF-hand domain pair DUF2229 PF09989.9 ORF104446 - 0.055 13.1 0.1 0.062 12.9 0.1 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) CDC24_OB3 PF17244.2 ORF10414 - 0.01 15.6 1.6 0.011 15.4 1.6 1.2 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Spc7 PF08317.11 ORF10414 - 0.011 14.6 15.7 0.013 14.4 15.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF3450 PF11932.8 ORF10414 - 0.037 13.3 10.5 0.05 12.9 10.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) AAA_13 PF13166.6 ORF10414 - 0.049 12.3 11.0 0.061 12.0 11.0 1.0 1 0 0 1 1 1 0 AAA domain HMMR_C PF15908.5 ORF10414 - 0.054 13.8 8.0 0.085 13.1 8.0 1.3 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal HeLo PF14479.6 ORF10414 - 0.073 12.9 4.9 0.082 12.7 4.9 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation DUF4618 PF15397.6 ORF10414 - 0.09 12.2 13.8 0.12 11.8 13.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Methyltrans_Mon PF14314.6 ORF10414 - 0.094 10.7 4.4 0.1 10.6 4.4 1.0 1 0 0 1 1 1 0 Virus-capping methyltransferase AdoHcyase_NAD PF00670.21 ORF10414 - 0.094 12.8 0.7 0.11 12.5 0.7 1.1 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DUF745 PF05335.13 ORF10414 - 0.1 12.3 11.2 0.047 13.4 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Pox_A_type_inc PF04508.12 ORF10414 - 0.1 12.5 0.0 0.1 12.5 0.0 3.0 4 0 0 4 4 3 0 Viral A-type inclusion protein repeat Seryl_tRNA_N PF02403.22 ORF10414 - 0.18 12.0 15.4 0.045 14.0 7.3 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain JIP_LZII PF16471.5 ORF10414 - 0.2 11.8 17.2 0.94 9.7 0.8 3.2 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II BRE1 PF08647.11 ORF10414 - 0.27 11.4 16.1 0.29 11.2 7.9 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase DUF5082 PF16888.5 ORF10414 - 0.3 11.3 14.1 0.62 10.4 14.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) DUF724 PF05266.14 ORF10414 - 0.31 10.9 15.5 1.9 8.3 7.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) PIN_8 PF18476.1 ORF10414 - 0.33 10.8 6.5 0.44 10.4 6.5 1.2 1 0 0 1 1 1 0 PIN like domain AI-2E_transport PF01594.16 ORF10414 - 0.51 9.4 1.0 0.54 9.3 1.0 1.2 1 0 0 1 1 1 0 AI-2E family transporter CENP-F_leu_zip PF10473.9 ORF10414 - 0.54 10.3 21.1 0.67 10.0 7.1 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Prominin PF05478.11 ORF10414 - 0.55 8.1 7.9 0.6 8.0 7.9 1.1 1 0 0 1 1 1 0 Prominin Exonuc_VII_L PF02601.15 ORF10414 - 0.59 9.6 7.4 0.69 9.4 7.4 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF1664 PF07889.12 ORF10414 - 0.95 9.5 12.2 1.7 8.7 6.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) HU-CCDC81_bac_2 PF18175.1 ORF10414 - 1.2 9.1 4.8 8.4 6.4 0.1 2.8 2 1 1 3 3 3 0 CCDC81-like prokaryotic HU domain 2 Tup_N PF08581.10 ORF10414 - 1.2 9.5 10.4 0.54 10.6 6.1 2.1 1 1 1 2 2 2 0 Tup N-terminal Dna2 PF08696.11 ORF10414 - 1.3 8.7 9.0 0.23 11.3 4.9 1.6 1 1 1 2 2 2 0 DNA replication factor Dna2 DUF4407 PF14362.6 ORF10414 - 1.7 8.0 7.4 2.5 7.4 7.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 ORF10414 - 1.7 8.5 14.0 13 5.7 6.0 3.3 1 1 1 2 2 2 0 Septum formation initiator APG6_N PF17675.1 ORF10414 - 1.7 9.2 17.8 9.6 6.7 5.1 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region SlyX PF04102.12 ORF10414 - 2.7 8.7 13.3 2.6 8.7 2.7 2.7 1 1 1 2 2 2 0 SlyX TMPIT PF07851.13 ORF10414 - 3.3 6.9 12.3 75 2.4 12.3 2.0 1 1 0 1 1 1 0 TMPIT-like protein UPF0242 PF06785.11 ORF10414 - 4 7.5 15.9 14 5.7 15.9 1.8 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HSCB_C PF07743.13 ORF10414 - 5.2 7.6 10.8 49 4.5 0.2 3.0 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain FAM76 PF16046.5 ORF10414 - 5.2 6.3 13.5 1.8 7.9 9.6 1.8 1 1 1 2 2 2 0 FAM76 protein FliD_N PF02465.18 ORF10414 - 6.3 7.6 10.8 4.3 8.1 3.9 2.2 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus RecG_N PF17190.4 ORF10414 - 6.4 7.6 10.1 23 5.8 6.5 2.3 1 1 1 2 2 2 0 RecG N-terminal helical domain DUF1515 PF07439.11 ORF10414 - 6.4 6.8 7.7 2.1 8.4 1.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) bZIP_2 PF07716.15 ORF10414 - 8.2 6.6 11.7 12 6.1 0.3 3.5 3 1 1 4 4 4 0 Basic region leucine zipper TBCA PF02970.16 ORF102825 - 0.0037 17.6 2.6 0.0052 17.1 2.6 1.3 1 0 0 1 1 1 1 Tubulin binding cofactor A Bac_GDH PF05088.12 ORF102825 - 0.042 11.4 0.0 0.043 11.3 0.0 1.0 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase DUF2408 PF10303.9 ORF102825 - 0.25 11.9 2.5 0.68 10.5 2.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) AsmA_1 PF13109.6 ORF10104 - 0.0066 15.9 0.1 0.0091 15.5 0.1 1.1 1 0 0 1 1 1 1 AsmA-like C-terminal region RRM_3 PF08777.11 ORF100659 - 0.073 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 RNA binding motif BTB PF00651.31 ORF10045 - 2.3e-11 43.9 0.3 3.9e-11 43.2 0.3 1.4 1 0 0 1 1 1 1 BTB/POZ domain BACK PF07707.15 ORF10045 - 7.5e-06 26.0 0.2 0.00028 20.9 0.0 2.2 2 0 0 2 2 2 1 BTB And C-terminal Kelch HisKA PF00512.25 NODE_48634_length_388_cov_1.430595_g40757_i0forward_frame_1 - 6.5e-10 38.9 0.4 1.1e-09 38.1 0.0 1.5 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain MFMR PF07777.11 NODE_48633_length_388_cov_1.643059_g40756_i0reverse_frame_1 - 0.034 14.6 0.1 0.043 14.3 0.1 1.2 1 0 0 1 1 1 0 G-box binding protein MFMR Peptidase_C2 PF00648.21 NODE_48631_length_388_cov_1.832861_g40754_i0reverse_frame_1 - 0.034 13.2 0.0 0.039 13.0 0.0 1.1 1 0 0 1 1 1 0 Calpain family cysteine protease DUF3833 PF12915.7 NODE_48631_length_388_cov_1.832861_g40754_i0reverse_frame_1 - 0.11 12.1 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3833) GSHPx PF00255.19 NODE_48621_length_388_cov_2.504249_g40744_i0reverse_frame_1 - 0.045 13.3 0.1 0.051 13.1 0.1 1.3 1 0 0 1 1 1 0 Glutathione peroxidase Helicase_C PF00271.31 NODE_48613_length_388_cov_3.254958_g40736_i0forward_frame_1 - 1.2e-31 109.3 0.1 1.4e-31 109.1 0.1 1.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 NODE_48613_length_388_cov_3.254958_g40736_i0forward_frame_1 - 2.7e-06 26.8 0.0 2.8e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase PetM PF08041.11 NODE_48604_length_388_cov_4.742210_g40727_i0reverse_frame_1 - 0.021 14.4 1.1 5.8 6.6 0.0 3.3 2 2 2 4 4 4 0 PetM family of cytochrome b6f complex subunit 7 PIN_8 PF18476.1 NODE_48604_length_388_cov_4.742210_g40727_i0forward_frame_1 - 0.097 12.5 3.7 0.15 11.9 3.7 1.3 1 0 0 1 1 1 0 PIN like domain LCD1 PF09798.9 NODE_48604_length_388_cov_4.742210_g40727_i0forward_frame_1 - 2.2 6.7 4.8 2.3 6.6 4.8 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein Bac_rhodopsin PF01036.18 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_1 - 1.9e-20 73.4 1.1 2.2e-20 73.2 1.1 1.0 1 0 0 1 1 1 1 Bacteriorhodopsin-like protein Heliorhodopsin PF18761.1 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_1 - 0.009 15.3 0.7 0.01 15.1 0.7 1.1 1 0 0 1 1 1 1 Heliorhodopsin MerC PF03203.14 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_1 - 0.031 14.7 1.7 0.041 14.3 1.7 1.1 1 0 0 1 1 1 0 MerC mercury resistance protein UPF0242 PF06785.11 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_1 - 0.37 10.9 1.1 0.47 10.5 1.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Ninjurin PF04923.12 NODE_48600_length_388_cov_19.059490_g40723_i0reverse_frame_1 - 0.068 13.1 4.6 0.029 14.3 2.5 1.5 2 0 0 2 2 2 0 Ninjurin DUF2628 PF10947.8 NODE_48595_length_388_cov_49.022663_g40718_i0forward_frame_1 - 0.89 9.9 4.0 0.71 10.3 1.9 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2628) DUF1319 PF07028.11 NODE_48591_length_388_cov_62.923513_g40714_i0reverse_frame_1 - 0.0098 16.1 0.7 0.013 15.7 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1319) Raftlin PF15250.6 NODE_48587_length_388_cov_66.274788_g40710_i0forward_frame_1 - 0.12 11.1 0.4 0.19 10.4 0.4 1.2 1 0 0 1 1 1 0 Raftlin Ribosomal_S5 PF00333.20 NODE_48587_length_388_cov_66.274788_g40710_i0forward_frame_1 - 0.12 12.3 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S5, N-terminal domain MRP PF09387.10 NODE_48584_length_388_cov_73.087819_g40707_i0forward_frame_1 - 0.043 13.8 0.2 0.056 13.4 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial RNA binding protein MRP Pex16 PF08610.10 NODE_48579_length_388_cov_84.733711_g40702_i0forward_frame_1 - 2.2e-10 40.2 0.1 2.7e-10 39.9 0.1 1.1 1 0 0 1 1 1 1 Peroxisomal membrane protein (Pex16) zf-RING_2 PF13639.6 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.0099 16.2 1.1 0.099 13.0 0.1 2.1 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.026 14.8 1.1 0.042 14.2 1.1 1.5 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.061 13.1 0.9 0.47 10.2 0.1 2.2 2 0 0 2 2 2 0 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.089 12.7 1.4 0.22 11.4 0.1 2.0 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.13 12.2 2.5 0.88 9.6 2.5 2.1 1 1 0 1 1 1 0 zinc-RING finger domain NPCC PF08058.11 NODE_48554_length_388_cov_403.048159_g36523_i2forward_frame_1 - 0.099 12.7 0.8 0.13 12.3 0.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component Thiolase_C PF02803.18 NODE_48548_length_388_cov_3704.560907_g40672_i0reverse_frame_1 - 0.16 11.6 1.0 0.25 11.0 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain Cytochrome_CBB3 PF13442.6 NODE_48547_length_388_cov_10444.147309_g40671_i0reverse_frame_1 - 1.6e-13 50.8 0.0 2.4e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 NODE_48547_length_388_cov_10444.147309_g40671_i0reverse_frame_1 - 1.4e-05 26.1 0.5 0.0002 22.4 0.5 2.2 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 NODE_48547_length_388_cov_10444.147309_g40671_i0reverse_frame_1 - 0.0052 16.5 0.6 0.035 13.8 0.4 2.0 1 1 1 2 2 2 1 Cytochrome c-550 domain TEA PF01285.18 NODE_48532_length_389_cov_2.415254_g40656_i0forward_frame_1 - 3 8.0 5.7 2.7 8.2 0.2 2.5 2 1 1 3 3 3 0 TEA/ATTS domain 7TM-7TMR_HD PF07698.11 NODE_48518_length_389_cov_41.494350_g40642_i0forward_frame_1 - 0.066 13.0 1.2 0.078 12.7 1.2 1.1 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase Wax2_C PF12076.8 NODE_48499_length_389_cov_104.858757_g40623_i0reverse_frame_1 - 0.034 13.8 0.3 0.093 12.4 0.2 1.7 1 1 1 2 2 2 0 WAX2 C-terminal domain FAM199X PF15814.5 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 0.38 9.8 2.4 0.42 9.6 2.4 1.2 1 0 0 1 1 1 0 Protein family FAM199X Connexin PF00029.19 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 0.45 10.2 1.9 0.49 10.1 1.9 1.2 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 0.91 8.2 3.9 0.9 8.2 3.9 1.1 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 2.5 6.3 7.3 2.5 6.3 7.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Atrophin-1 PF03154.15 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 3.6 5.7 11.0 4.6 5.4 11.0 1.1 1 0 0 1 1 1 0 Atrophin-1 family RNA_polI_A34 PF08208.11 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 9 6.3 18.5 16 5.6 18.5 1.4 1 1 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Stathmin PF00836.19 NODE_48486_length_389_cov_211.663842_g40610_i0reverse_frame_1 - 0.041 13.8 5.9 0.063 13.2 5.9 1.3 1 0 0 1 1 1 0 Stathmin family CAAD PF14159.6 NODE_48486_length_389_cov_211.663842_g40610_i0forward_frame_1 - 0.067 13.0 0.3 0.12 12.2 0.1 1.7 2 1 0 2 2 2 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase zf-RRPl_C4 PF17026.5 NODE_48477_length_390_cov_1.470423_g40601_i0reverse_frame_1 - 0.012 15.7 2.4 0.013 15.6 1.6 1.5 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type Pex24p PF06398.11 NODE_48470_length_390_cov_2.030986_g40594_i0reverse_frame_1 - 6.3 5.7 9.3 4.8 6.1 8.1 1.3 1 1 1 2 2 2 0 Integral peroxisomal membrane peroxin LpxI_N PF17930.1 NODE_48470_length_390_cov_2.030986_g40594_i0forward_frame_1 - 0.12 12.2 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 LpxI N-terminal domain HTH_3 PF01381.22 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 3.1e-07 30.3 0.1 9.2e-07 28.8 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_37 PF13744.6 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.0045 16.9 0.1 0.011 15.7 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain CENP-B_N PF04218.13 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.018 14.7 0.0 0.064 12.9 0.0 1.8 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain Sigma54_DBD PF04552.13 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.021 14.6 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 Sigma-54, DNA binding domain HTH_26 PF13443.6 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.063 13.7 0.1 0.13 12.7 0.0 1.6 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_IclR PF09339.10 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.065 13.0 0.0 0.098 12.5 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_31 PF13560.6 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.1 12.9 0.0 0.17 12.3 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.11 12.4 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 MarR family zf-FCS PF06467.14 NODE_48465_length_390_cov_2.419718_g40589_i0reverse_frame_1 - 0.071 13.1 2.0 0.13 12.3 2.0 1.4 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif Nop14 PF04147.12 NODE_48465_length_390_cov_2.419718_g40589_i0forward_frame_1 - 0.043 12.0 0.1 0.054 11.7 0.1 1.1 1 0 0 1 1 1 0 Nop14-like family DNA_pol_B_2 PF03175.13 NODE_48460_length_390_cov_2.740845_g40584_i0forward_frame_1 - 0.0047 15.9 0.0 0.0047 15.9 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral CDH PF02611.15 NODE_48460_length_390_cov_2.740845_g40584_i0forward_frame_1 - 0.084 12.5 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 CDP-diacylglycerol pyrophosphatase Glyco_tranf_2_4 PF13704.6 NODE_48455_length_390_cov_3.329577_g40579_i0reverse_frame_1 - 0.068 13.7 0.2 0.34 11.5 0.2 2.0 1 1 0 1 1 1 0 Glycosyl transferase family 2 Aldedh PF00171.22 NODE_48450_length_390_cov_4.414085_g40574_i0forward_frame_1 - 0.18 10.2 0.1 0.23 9.9 0.1 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family Rhabdo_M1 PF03342.13 NODE_48443_length_390_cov_40.760563_g40567_i0reverse_frame_1 - 0.025 14.0 0.1 0.029 13.7 0.1 1.2 1 0 0 1 1 1 0 Rhabdovirus M1 matrix protein (M1 polymerase-associated protein) SPC25 PF06703.11 NODE_48434_length_390_cov_81.154930_g40558_i0reverse_frame_1 - 0.01 15.6 1.8 0.012 15.4 1.8 1.2 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Meckelin PF09773.9 NODE_48431_length_390_cov_84.718310_g40555_i0forward_frame_1 - 0.31 9.1 1.2 0.64 8.0 0.5 1.6 1 1 1 2 2 2 0 Meckelin (Transmembrane protein 67) DUF3730 PF12530.8 NODE_48418_length_390_cov_135.307042_g40542_i0reverse_frame_1 - 0.0081 15.7 0.1 0.01 15.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3730) DUF4663 PF15668.5 NODE_48412_length_390_cov_197.825352_g40536_i0reverse_frame_1 - 0.15 11.1 1.7 0.18 10.8 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4663) SR-25 PF10500.9 NODE_48409_length_390_cov_339.138028_g40533_i0reverse_frame_1 - 1.3 8.6 11.3 1.7 8.2 11.3 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF727 PF05303.12 NODE_48407_length_390_cov_1161.766197_g40531_i0forward_frame_1 - 6.5e-07 29.4 1.2 2e-06 27.8 1.2 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF727) GHL5 PF14872.6 NODE_48407_length_390_cov_1161.766197_g40531_i0forward_frame_1 - 0.036 12.1 0.5 0.043 11.9 0.5 1.0 1 0 0 1 1 1 0 Hypothetical glycoside hydrolase 5 PBP1_TM PF14812.6 NODE_48401_length_391_cov_1.519663_g40525_i0reverse_frame_3 - 0.0032 17.8 0.6 0.0045 17.3 0.6 1.2 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Xan_ur_permease PF00860.20 NODE_48398_length_391_cov_1.733146_g40522_i0forward_frame_2 - 6.6e-19 67.9 2.4 6.6e-19 67.9 2.4 1.6 1 1 1 2 2 2 1 Permease family DUF3373 PF11853.8 NODE_48383_length_391_cov_2.985955_g40507_i0reverse_frame_3 - 0.056 12.6 0.4 0.078 12.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3373) Acetyltransf_2 PF00797.17 NODE_48383_length_391_cov_2.985955_g40507_i0forward_frame_2 - 1.8e-31 109.8 0.1 2e-31 109.6 0.1 1.0 1 0 0 1 1 1 1 N-acetyltransferase SnoaL PF07366.12 NODE_48383_length_391_cov_2.985955_g40507_i0forward_frame_2 - 0.071 12.9 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase Lamprin PF06403.11 NODE_48381_length_391_cov_3.143258_g40505_i0forward_frame_2 - 9.2 6.2 9.8 18 5.3 9.8 1.4 1 1 0 1 1 1 0 Lamprin DUF3671 PF12420.8 NODE_48376_length_391_cov_4.095506_g40500_i0forward_frame_2 - 0.23 11.5 4.9 0.26 11.4 3.3 1.8 1 1 1 2 2 2 0 Protein of unknown function PhoLip_ATPase_N PF16209.5 NODE_48374_length_391_cov_5.671348_g40498_i0reverse_frame_3 - 1.9e-18 65.9 0.4 1.9e-18 65.9 0.4 1.7 2 0 0 2 2 2 1 Phospholipid-translocating ATPase N-terminal Leuk-A4-hydro_C PF09127.11 NODE_48374_length_391_cov_5.671348_g40498_i0forward_frame_2 - 0.087 12.9 0.2 0.24 11.5 0.1 1.6 1 1 1 2 2 2 0 Leukotriene A4 hydrolase, C-terminal zf-Nse PF11789.8 NODE_48374_length_391_cov_5.671348_g40498_i0forward_frame_2 - 0.12 12.2 0.1 0.23 11.3 0.1 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Lamprin PF06403.11 NODE_48372_length_391_cov_10.491573_g40496_i0reverse_frame_3 - 0.006 16.5 14.8 0.041 13.9 10.7 2.9 1 1 1 2 2 2 2 Lamprin zf-H2C2_5 PF13909.6 NODE_48367_length_391_cov_69.064607_g40491_i0reverse_frame_2 - 0.077 12.8 0.6 0.14 11.9 0.6 1.4 1 0 0 1 1 1 0 C2H2-type zinc-finger domain SCAB-ABD PF16711.5 NODE_48362_length_391_cov_76.452247_g40486_i0reverse_frame_3 - 0.03 14.2 1.3 0.047 13.6 1.3 1.3 1 0 0 1 1 1 0 Actin-binding domain of plant-specific actin-binding protein EbsA PF17255.2 NODE_48362_length_391_cov_76.452247_g40486_i0reverse_frame_2 - 0.12 12.7 2.9 0.17 12.2 2.9 1.2 1 0 0 1 1 1 0 EbsA-like protein Atg14 PF10186.9 NODE_48357_length_391_cov_86.741573_g40481_i0reverse_frame_2 - 0.038 13.1 9.5 0.041 13.0 9.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 WD40_alt PF14077.6 NODE_48357_length_391_cov_86.741573_g40481_i0reverse_frame_2 - 0.11 12.4 6.8 2.3 8.1 0.5 2.8 2 1 1 3 3 3 0 Alternative WD40 repeat motif Histidinol_dh PF00815.20 NODE_48357_length_391_cov_86.741573_g40481_i0reverse_frame_2 - 0.26 10.2 1.4 0.28 10.2 1.4 1.1 1 0 0 1 1 1 0 Histidinol dehydrogenase GvpG PF05120.12 NODE_48355_length_391_cov_88.890449_g40479_i0forward_frame_3 - 0.029 14.4 0.6 0.083 12.9 0.1 1.9 1 1 1 2 2 2 0 Gas vesicle protein G FHA PF00498.26 NODE_48352_length_391_cov_103.783708_g40476_i0reverse_frame_3 - 6.7e-17 61.6 0.3 1.1e-16 60.9 0.3 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_48352_length_391_cov_103.783708_g40476_i0reverse_frame_3 - 2.6e-05 24.4 0.0 4.1e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FHA_2 PF17913.1 NODE_48352_length_391_cov_103.783708_g40476_i0reverse_frame_3 - 0.076 13.3 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 FHA domain CpXC PF14353.6 NODE_48352_length_391_cov_103.783708_g40476_i0forward_frame_2 - 0.047 13.7 3.0 0.047 13.7 0.7 1.9 1 1 1 2 2 2 0 CpXC protein Nup188 PF10487.9 NODE_48347_length_391_cov_140.834270_g40471_i0reverse_frame_3 - 0.12 10.3 0.0 0.14 10.1 0.0 1.0 1 0 0 1 1 1 0 Nucleoporin subcomplex protein binding to Pom34 DUF1534 PF07551.11 NODE_48346_length_391_cov_148.078652_g40470_i0forward_frame_3 - 0.52 10.1 4.6 0.19 11.5 1.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1534) Lact-deh-memb PF09330.11 NODE_48345_length_391_cov_148.157303_g40469_i0forward_frame_3 - 0.08 12.3 0.0 0.089 12.1 0.0 1.0 1 0 0 1 1 1 0 D-lactate dehydrogenase, membrane binding Rab15_effector PF15208.6 NODE_48343_length_391_cov_155.910112_g40467_i0forward_frame_3 - 0.082 12.2 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Rab15 effector Enterotoxin_HS1 PF08090.11 NODE_48343_length_391_cov_155.910112_g40467_i0forward_frame_3 - 2.3 8.2 8.0 2.9 7.9 5.2 2.6 2 1 0 2 2 2 0 Heat stable E.coli enterotoxin 1 DUF4368 PF14287.6 NODE_48342_length_391_cov_159.898876_g40466_i0reverse_frame_2 - 0.011 16.0 0.3 0.023 15.0 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4368) DUF1231 PF06802.11 NODE_48341_length_391_cov_178.036517_g40465_i0forward_frame_2 - 0.00097 18.4 0.7 0.001 18.3 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1231) DUF2650 PF10853.8 NODE_48341_length_391_cov_178.036517_g40465_i0forward_frame_2 - 5.8 6.7 9.4 0.35 10.6 1.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2650) Pkinase PF00069.25 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 2.1e-29 102.7 0.0 2.5e-29 102.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 2.4e-19 69.6 0.0 2.8e-19 69.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 1.7e-07 30.8 0.0 2e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 0.00037 20.5 0.0 0.0004 20.4 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 0.072 12.6 0.0 0.092 12.2 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 0.08 11.7 0.0 0.084 11.6 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Mpt_N PF09176.11 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_2 - 0.09 12.9 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal ATP-synt_C PF00137.21 NODE_48337_length_391_cov_350.514045_g40461_i0forward_frame_3 - 3.4e-10 40.1 0.3 5.5e-10 39.4 0.3 1.3 1 0 0 1 1 1 1 ATP synthase subunit C Na_H_antiport_1 PF06965.12 NODE_48337_length_391_cov_350.514045_g40461_i0forward_frame_3 - 0.087 11.6 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Na+/H+ antiporter 1 Clp_N PF02861.20 NODE_48333_length_391_cov_549.446629_g40458_i0reverse_frame_2 - 1.7 8.9 9.2 2 8.6 1.6 2.6 2 1 0 2 2 2 0 Clp amino terminal domain, pathogenicity island component Dynein_light PF01221.18 NODE_48331_length_391_cov_1621.949438_g40456_i0reverse_frame_2 - 2.4e-20 72.7 0.3 3.6e-20 72.1 0.3 1.3 1 0 0 1 1 1 1 Dynein light chain type 1 DUF1071 PF06378.11 NODE_48329_length_391_cov_3673.390449_g40455_i0reverse_frame_3 - 0.14 11.8 0.1 0.19 11.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) Fer4_2 PF12797.7 NODE_48325_length_392_cov_1.565826_g40451_i0forward_frame_3 - 0.31 11.2 3.1 19 5.6 0.1 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain ATP-synt_8 PF00895.20 NODE_48324_length_392_cov_1.649860_g40450_i0forward_frame_3 - 6.4 7.3 0.0 6.4 7.3 0.0 3.2 3 1 0 3 3 3 0 ATP synthase protein 8 Topoisom_I_N PF02919.15 NODE_48323_length_392_cov_1.733894_g40449_i0forward_frame_2 - 1.5e-34 119.3 2.4 1.7e-34 119.2 2.4 1.0 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, DNA binding fragment FIT1_2 PF17357.2 NODE_48322_length_392_cov_1.789916_g40448_i0forward_frame_2 - 0.089 12.9 2.7 2.4 8.3 0.1 2.4 1 1 0 2 2 2 0 Facilitor Of iron transport 1 and 2 Autoind_bind PF03472.15 NODE_48321_length_392_cov_1.792717_g40447_i0forward_frame_3 - 0.036 13.6 0.1 0.047 13.2 0.1 1.2 1 0 0 1 1 1 0 Autoinducer binding domain 2TM PF13239.6 NODE_48320_length_392_cov_1.809524_g40446_i0forward_frame_2 - 0.24 11.7 4.9 0.43 10.9 4.9 1.5 1 0 0 1 1 1 0 2TM domain YdjC PF04794.12 NODE_48317_length_392_cov_1.963585_g40443_i0forward_frame_2 - 7e-07 29.5 0.0 8.4e-07 29.2 0.0 1.0 1 0 0 1 1 1 1 YdjC-like protein Lipase_GDSL PF00657.22 NODE_48317_length_392_cov_1.963585_g40443_i0forward_frame_2 - 0.063 13.2 2.2 0.079 12.9 2.2 1.0 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase Nse5 PF08691.10 NODE_48313_length_392_cov_2.501401_g40439_i0reverse_frame_2 - 0.12 11.0 0.5 0.31 9.6 0.3 1.6 2 0 0 2 2 2 0 DNA repair proteins Nse5 and Nse6 Trp_Tyr_perm PF03222.13 NODE_48313_length_392_cov_2.501401_g40439_i0forward_frame_2 - 2.5e-36 125.6 9.5 2.8e-36 125.4 9.5 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 NODE_48313_length_392_cov_2.501401_g40439_i0forward_frame_2 - 5.8e-10 38.5 9.2 6.4e-10 38.3 9.2 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein AA_permease_2 PF13520.6 NODE_48313_length_392_cov_2.501401_g40439_i0forward_frame_2 - 0.00094 18.1 9.6 0.001 18.0 9.6 1.0 1 0 0 1 1 1 1 Amino acid permease DUF2207 PF09972.9 NODE_48313_length_392_cov_2.501401_g40439_i0forward_frame_2 - 0.75 8.5 2.7 0.9 8.2 2.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-C3HC4 PF00097.25 NODE_48311_length_392_cov_2.616246_g40437_i0reverse_frame_2 - 0.71 9.8 5.5 0.23 11.3 2.9 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) AAA_6 PF12774.7 NODE_48310_length_392_cov_2.624650_g40436_i0reverse_frame_3 - 0.029 13.4 0.0 0.036 13.0 0.0 1.1 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region YcxB PF14317.6 NODE_48310_length_392_cov_2.624650_g40436_i0reverse_frame_3 - 0.081 12.6 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 YcxB-like protein Ank_4 PF13637.6 NODE_48310_length_392_cov_2.624650_g40436_i0forward_frame_3 - 0.00021 21.7 0.1 0.0003 21.3 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) MmgE_PrpD PF03972.14 NODE_48309_length_392_cov_2.714286_g40435_i0reverse_frame_3 - 6.9e-40 136.9 0.1 7.4e-40 136.8 0.1 1.0 1 0 0 1 1 1 1 MmgE/PrpD family Abhydrolase_3 PF07859.13 NODE_48307_length_392_cov_3.445378_g40433_i0reverse_frame_2 - 1e-29 103.9 0.0 1.2e-29 103.7 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 NODE_48307_length_392_cov_3.445378_g40433_i0reverse_frame_2 - 0.024 14.5 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.21 NODE_48307_length_392_cov_3.445378_g40433_i0reverse_frame_2 - 0.14 11.7 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Prolyl oligopeptidase family Promethin PF16015.5 NODE_48306_length_392_cov_3.691877_g40432_i0reverse_frame_2 - 0.0017 18.3 4.7 0.0021 18.0 4.7 1.1 1 0 0 1 1 1 1 Promethin DUF2207 PF09972.9 NODE_48306_length_392_cov_3.691877_g40432_i0reverse_frame_2 - 0.053 12.3 1.9 0.06 12.1 1.9 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks176.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks176.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks176.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks176.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- T4_deiodinase PF00837.17 NODE_48304_length_392_cov_4.193277_g40430_i0reverse_frame_3 - 0.043 13.1 0.0 0.055 12.7 0.0 1.1 1 0 0 1 1 1 0 Iodothyronine deiodinase DAPDH_C PF16654.5 NODE_48302_length_392_cov_6.537815_g40428_i0reverse_frame_2 - 0.14 12.0 0.1 0.19 11.6 0.1 1.2 1 0 0 1 1 1 0 Diaminopimelic acid dehydrogenase C-terminal domain Porphyrn_cat_1 PF18206.1 NODE_48301_length_392_cov_19.240896_g40427_i0forward_frame_2 - 0.11 13.1 2.8 0.15 12.7 2.8 1.2 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 Rio2_N PF09202.11 NODE_48299_length_392_cov_54.691877_g40425_i0forward_frame_2 - 0.093 13.0 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Rio2, N-terminal Cbl_N2 PF02761.14 NODE_48297_length_392_cov_58.983193_g40423_i0reverse_frame_3 - 0.05 14.3 12.4 0.35 11.6 2.1 3.1 3 0 0 3 3 3 0 CBL proto-oncogene N-terminus, EF hand-like domain Amidinotransf PF02274.17 NODE_48294_length_392_cov_70.705882_g40420_i0reverse_frame_3 - 0.052 12.6 0.0 0.063 12.4 0.0 1.1 1 0 0 1 1 1 0 Amidinotransferase DUF4366 PF14283.6 NODE_48293_length_392_cov_71.434174_g40419_i0reverse_frame_3 - 0.03 14.4 0.6 0.044 13.8 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) DUF817 PF05675.12 NODE_48293_length_392_cov_71.434174_g40419_i0forward_frame_2 - 0.081 12.6 1.9 0.07 12.8 0.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF817) Hydrolase PF00702.26 NODE_48288_length_392_cov_88.456583_g40414_i0reverse_frame_2 - 1.9e-07 31.6 0.1 2.3e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NDK PF00334.19 NODE_48286_length_392_cov_106.344538_g39939_i1reverse_frame_2 - 0.06 13.4 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 Nucleoside diphosphate kinase ROS_MUCR PF05443.11 NODE_48278_length_392_cov_125.509804_g40405_i0reverse_frame_3 - 0.014 15.4 1.2 0.017 15.2 1.2 1.1 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein DUF243 PF03103.17 NODE_48278_length_392_cov_125.509804_g40405_i0reverse_frame_3 - 0.11 12.8 4.2 0.71 10.2 2.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF243) TT_ORF1 PF02956.14 NODE_48278_length_392_cov_125.509804_g40405_i0reverse_frame_2 - 4.1 6.0 11.2 3.4 6.2 11.2 1.2 1 0 0 1 1 1 0 TT viral orf 1 EFG_C PF00679.24 NODE_48266_length_392_cov_266.815126_g40393_i0reverse_frame_3 - 0.054 13.5 0.0 0.096 12.7 0.0 1.4 1 0 0 1 1 1 0 Elongation factor G C-terminus SpoVS PF04232.12 NODE_48257_length_392_cov_8095.369748_g40385_i0reverse_frame_2 - 0.32 10.8 7.9 1.5 8.6 1.0 2.2 1 1 1 2 2 2 0 Stage V sporulation protein S (SpoVS) Calcyon PF06387.11 NODE_48257_length_392_cov_8095.369748_g40385_i0reverse_frame_2 - 0.94 9.4 4.8 11 6.0 0.3 2.8 1 1 2 3 3 3 0 D1 dopamine receptor-interacting protein (calcyon) DUF2427 PF10348.9 NODE_48255_length_393_cov_1.837989_g40383_i0forward_frame_2 - 0.21 11.4 1.8 1.7 8.5 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2427) DUF3446 PF11928.8 NODE_48254_length_393_cov_1.868715_g40382_i0forward_frame_2 - 3.1 8.1 6.7 0.32 11.3 1.3 1.9 2 0 0 2 2 2 0 Early growth response N-terminal domain BPD_transp_2 PF02653.16 NODE_48252_length_393_cov_2.008380_g40380_i0reverse_frame_3 - 2.1e-21 76.3 13.7 2.3e-21 76.1 13.7 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF4229 PF14012.6 NODE_48252_length_393_cov_2.008380_g40380_i0reverse_frame_3 - 0.029 14.5 0.9 0.029 14.5 0.9 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF4229) DUF3418 PF11898.8 NODE_48249_length_393_cov_2.178771_g40377_i0forward_frame_3 - 1.1e-53 182.9 0.0 1.2e-53 182.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) DUF2249 PF10006.9 NODE_48249_length_393_cov_2.178771_g40377_i0forward_frame_3 - 0.057 13.3 0.2 0.41 10.5 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) SSFA2_C PF14723.6 NODE_48248_length_393_cov_2.458101_g40376_i0reverse_frame_3 - 0.013 15.4 1.1 0.018 14.9 1.1 1.2 1 0 0 1 1 1 0 Sperm-specific antigen 2 C-terminus Trans_reg_C PF00486.28 NODE_48246_length_393_cov_2.511173_g40374_i0reverse_frame_3 - 1.1e-23 83.1 0.1 1.5e-23 82.7 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal MarR_2 PF12802.7 NODE_48246_length_393_cov_2.511173_g40374_i0reverse_frame_3 - 0.025 14.4 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 MarR family Acyl-CoA_dh_1 PF00441.24 NODE_48242_length_393_cov_2.977654_g40370_i0reverse_frame_2 - 2.3e-33 115.5 3.0 2.6e-33 115.4 3.0 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 NODE_48242_length_393_cov_2.977654_g40370_i0reverse_frame_2 - 7e-14 52.2 1.4 8e-14 52.1 1.4 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain YopD PF05844.12 NODE_48242_length_393_cov_2.977654_g40370_i0reverse_frame_2 - 0.0032 16.5 0.1 0.0034 16.4 0.1 1.1 1 0 0 1 1 1 1 YopD protein EFP_N PF08207.12 NODE_48241_length_393_cov_3.053073_g40369_i0forward_frame_2 - 2.3e-17 62.7 0.1 3.6e-17 62.2 0.1 1.3 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 NODE_48241_length_393_cov_3.053073_g40369_i0forward_frame_2 - 5.8e-14 51.9 3.0 8.9e-14 51.3 3.0 1.3 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain Cys_rich_CWC PF14375.6 NODE_48240_length_393_cov_3.251397_g40368_i0forward_frame_2 - 0.056 13.8 1.7 0.14 12.5 1.7 1.7 1 0 0 1 1 1 0 Cysteine-rich CWC DUF3086 PF11285.8 NODE_48238_length_393_cov_3.536313_g40366_i0forward_frame_3 - 0.021 13.9 0.5 0.024 13.8 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3086) HSBP1 PF06825.12 NODE_48238_length_393_cov_3.536313_g40366_i0forward_frame_3 - 0.078 12.8 0.1 0.22 11.4 0.0 1.8 2 0 0 2 2 2 0 Heat shock factor binding protein 1 SR-25 PF10500.9 NODE_48237_length_393_cov_3.553073_g40365_i0reverse_frame_3 - 0.00081 19.1 6.3 0.00081 19.1 6.3 1.5 2 0 0 2 2 2 1 Nuclear RNA-splicing-associated protein AP3D1 PF06375.11 NODE_48237_length_393_cov_3.553073_g40365_i0reverse_frame_3 - 1 9.6 9.3 1.4 9.2 9.3 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DoxX PF07681.12 NODE_48236_length_393_cov_3.575419_g40364_i0forward_frame_2 - 1.1e-16 61.1 14.2 1.5e-16 60.7 14.2 1.2 1 0 0 1 1 1 1 DoxX DoxX_2 PF13564.6 NODE_48236_length_393_cov_3.575419_g40364_i0forward_frame_2 - 0.0011 19.0 7.7 0.0016 18.5 7.7 1.2 1 0 0 1 1 1 1 DoxX-like family SURF4 PF02077.15 NODE_48236_length_393_cov_3.575419_g40364_i0forward_frame_2 - 0.011 15.3 6.2 0.05 13.2 6.2 1.8 1 1 0 1 1 1 0 SURF4 family Phosphorylase PF00343.20 NODE_48235_length_393_cov_5.301676_g40363_i0forward_frame_3 - 1.5e-48 165.7 0.3 1.7e-48 165.5 0.3 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase TssC PF17541.2 NODE_48235_length_393_cov_5.301676_g40363_i0forward_frame_3 - 0.006 15.5 0.0 0.0072 15.2 0.0 1.1 1 0 0 1 1 1 1 Type VI secretion system, TssC, VipB FAR1 PF03101.15 NODE_48235_length_393_cov_5.301676_g40363_i0forward_frame_2 - 0.014 16.1 1.8 0.022 15.4 1.8 1.3 1 0 0 1 1 1 0 FAR1 DNA-binding domain TRADD_N PF09034.10 NODE_48231_length_393_cov_44.550279_g40359_i0reverse_frame_2 - 0.034 14.2 1.3 1.7 8.7 0.2 2.1 2 0 0 2 2 2 0 TRADD, N-terminal domain Thiolase_C PF02803.18 NODE_48227_length_393_cov_55.145251_g40355_i0reverse_frame_2 - 1.2e-25 89.5 1.5 1.6e-25 89.2 1.5 1.1 1 0 0 1 1 1 1 Thiolase, C-terminal domain BLM10_N PF16547.5 NODE_48217_length_393_cov_81.703911_g40345_i0forward_frame_3 - 0.16 12.3 1.3 1.8 8.9 0.4 2.1 1 1 0 2 2 2 0 Proteasome-substrate-size regulator, N-terminal MAP65_ASE1 PF03999.12 NODE_48217_length_393_cov_81.703911_g40345_i0forward_frame_3 - 1.7 7.2 10.6 1.9 7.1 10.6 1.0 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) PPR_2 PF13041.6 NODE_48216_length_393_cov_85.846369_g40344_i0reverse_frame_3 - 0.0073 16.5 0.0 1.3 9.3 0.0 2.2 2 0 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_48216_length_393_cov_85.846369_g40344_i0reverse_frame_3 - 0.13 12.4 0.0 0.35 11.0 0.0 1.7 1 1 1 2 2 2 0 Pentatricopeptide repeat domain Ank_5 PF13857.6 NODE_48213_length_393_cov_90.162011_g40341_i0forward_frame_3 - 0.0001 22.5 0.1 0.00017 21.8 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_48213_length_393_cov_90.162011_g40341_i0forward_frame_3 - 0.0031 18.1 0.1 0.0051 17.4 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_48213_length_393_cov_90.162011_g40341_i0forward_frame_3 - 0.009 16.6 0.0 0.014 16.0 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_48213_length_393_cov_90.162011_g40341_i0forward_frame_3 - 0.0096 16.3 0.0 2.3 8.8 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat Coilin_N PF15862.5 NODE_48211_length_393_cov_101.877095_g40339_i0forward_frame_3 - 0.026 14.3 5.6 0.035 13.9 5.6 1.1 1 0 0 1 1 1 0 Coilin N-terminus Presenilin PF01080.17 NODE_48211_length_393_cov_101.877095_g40339_i0forward_frame_3 - 5 5.8 4.9 6 5.5 4.9 1.0 1 0 0 1 1 1 0 Presenilin Pmp3 PF01679.17 NODE_48210_length_393_cov_110.212291_g40338_i0reverse_frame_2 - 0.054 13.7 0.6 0.11 12.7 0.6 1.5 1 0 0 1 1 1 0 Proteolipid membrane potential modulator TMEM61 PF15105.6 NODE_48205_length_393_cov_123.243017_g40333_i0reverse_frame_2 - 0.11 12.3 1.1 0.15 11.9 0.3 1.5 1 1 1 2 2 2 0 TMEM61 protein family tRNA_U5-meth_tr PF05958.11 NODE_48202_length_393_cov_140.689944_g40330_i0forward_frame_3 - 2.8e-27 95.7 0.2 5.8e-27 94.6 0.2 1.4 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase DUF4628 PF15429.6 NODE_48201_length_393_cov_142.106145_g40329_i0reverse_frame_2 - 0.16 11.6 3.5 0.21 11.2 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4628) Bunya_NS-S PF01104.17 NODE_48199_length_393_cov_151.916201_g40327_i0reverse_frame_2 - 0.97 9.3 7.0 0.47 10.3 3.8 1.8 1 1 1 2 2 2 0 Bunyavirus non-structural protein NS-s Sp38 PF07354.12 NODE_48197_length_393_cov_177.064246_g40325_i0reverse_frame_2 - 0.055 12.9 5.3 1.5 8.2 0.7 2.2 2 0 0 2 2 2 0 Zona-pellucida-binding protein (Sp38) NCD3G PF07562.14 NODE_48197_length_393_cov_177.064246_g40325_i0reverse_frame_2 - 0.3 11.1 13.5 2.4 8.2 1.0 2.9 2 2 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR DHODB_Fe-S_bind PF10418.9 NODE_48197_length_393_cov_177.064246_g40325_i0reverse_frame_2 - 0.92 9.4 5.1 0.22 11.3 0.9 2.1 2 0 0 2 2 2 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ephrin_rec_like PF07699.13 NODE_48197_length_393_cov_177.064246_g40325_i0reverse_frame_2 - 1.4 8.7 14.9 0.75 9.6 1.7 2.7 3 0 0 3 3 3 0 Putative ephrin-receptor like DUF846 PF05832.12 NODE_48191_length_393_cov_320.178771_g40319_i0forward_frame_2 - 6.4e-25 87.8 4.6 8.3e-25 87.4 4.6 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) VirB3 PF05101.13 NODE_48191_length_393_cov_320.178771_g40319_i0forward_frame_2 - 0.038 14.2 0.8 0.053 13.8 0.8 1.1 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF3592 PF12158.8 NODE_48191_length_393_cov_320.178771_g40319_i0forward_frame_2 - 0.15 12.1 1.1 1.8 8.6 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3592) Glycolytic PF00274.19 NODE_48183_length_393_cov_4813.321229_g40311_i0reverse_frame_2 - 3.3e-05 22.8 0.2 5.1e-05 22.2 0.2 1.3 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I SirB PF04247.12 ORF99757 - 8.7e-35 119.4 8.5 9.6e-35 119.3 8.5 1.0 1 0 0 1 1 1 1 Invasion gene expression up-regulator, SirB DUF5472 PF17566.2 ORF99757 - 0.069 13.1 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5472) DUF588 PF04535.12 ORF99757 - 0.081 12.7 0.1 0.081 12.7 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF588) Pkinase PF00069.25 ORF99 - 5.8e-38 130.8 0.0 6.4e-38 130.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF99 - 1.7e-16 60.3 0.0 2e-16 60.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF99 - 0.00017 21.0 0.0 0.00021 20.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Mitofilin PF09731.9 ORF98754 - 0.011 14.7 10.4 0.011 14.6 10.4 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Atg14 PF10186.9 ORF98754 - 0.014 14.5 9.7 0.023 13.8 9.7 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CLZ PF16526.5 ORF98754 - 0.018 15.4 8.7 0.036 14.4 4.5 2.4 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels SKA1 PF07160.12 ORF98754 - 0.026 14.4 8.6 0.054 13.3 8.6 1.5 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 1 ATG16 PF08614.11 ORF98754 - 0.029 14.6 9.3 1.5 9.0 9.2 2.6 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF4407 PF14362.6 ORF98754 - 0.038 13.3 5.7 0.058 12.7 5.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) KxDL PF10241.9 ORF98754 - 0.041 14.2 7.6 0.26 11.6 2.4 2.3 1 1 2 3 3 3 0 Uncharacterized conserved protein TetR_C_13 PF16925.5 ORF98754 - 0.051 13.5 0.3 0.14 12.1 0.1 1.7 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain CorA PF01544.18 ORF98754 - 0.077 12.3 7.8 0.1 11.9 7.8 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein FlaC_arch PF05377.11 ORF98754 - 0.081 13.3 6.2 3.3 8.2 0.7 2.9 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) AKNA PF12443.8 ORF98754 - 0.091 13.4 5.3 0.24 12.0 1.2 2.4 1 1 1 2 2 2 0 AT-hook-containing transcription factor Fib_alpha PF08702.10 ORF98754 - 0.12 12.6 11.7 0.31 11.2 4.8 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF98754 - 0.12 12.9 9.6 0.24 11.9 9.2 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 Terminase_4 PF05119.12 ORF98754 - 0.13 12.8 3.1 0.27 11.7 1.9 1.9 1 1 1 2 2 2 0 Phage terminase, small subunit Csm1_N PF18504.1 ORF98754 - 0.13 12.6 11.0 1.5 9.2 3.7 2.9 1 1 2 3 3 3 0 Csm1 N-terminal domain CR6_interact PF10147.9 ORF98754 - 0.18 11.5 10.7 0.21 11.3 10.7 1.1 1 0 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 Exonuc_VII_L PF02601.15 ORF98754 - 0.22 11.0 5.4 0.26 10.8 5.4 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Baculo_PEP_C PF04513.12 ORF98754 - 0.23 11.5 4.7 1 9.4 4.2 1.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus POX PF07526.11 ORF98754 - 0.25 11.9 4.5 0.29 11.7 4.5 1.1 1 0 0 1 1 1 0 Associated with HOX YtxH PF12732.7 ORF98754 - 0.26 11.8 6.6 5.8 7.5 0.6 2.2 1 1 1 2 2 2 0 YtxH-like protein DUF641 PF04859.12 ORF98754 - 0.49 10.7 7.8 0.42 11.0 5.4 2.1 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF1043 PF06295.12 ORF98754 - 0.62 10.1 5.6 0.65 10.0 4.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) TMPIT PF07851.13 ORF98754 - 0.67 9.1 9.1 0.98 8.6 9.1 1.4 1 1 0 1 1 1 0 TMPIT-like protein ZapB PF06005.12 ORF98754 - 0.95 10.0 9.5 4 8.0 9.5 2.1 1 1 0 1 1 1 0 Cell division protein ZapB DUF2205 PF10224.9 ORF98754 - 1.1 9.3 7.6 8.3 6.5 0.2 2.4 1 1 1 2 2 2 0 Short coiled-coil protein DUF1515 PF07439.11 ORF98754 - 1.2 9.2 5.8 1.2 9.2 3.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) DUF1664 PF07889.12 ORF98754 - 1.3 9.1 7.9 9.7 6.2 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 ORF98754 - 1.3 9.6 13.4 0.4 11.2 8.6 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region MRPL52 PF18699.1 ORF98754 - 1.6 9.0 9.6 3.2 8.0 4.1 2.2 1 1 2 3 3 3 0 Mitoribosomal protein mL52 DUF349 PF03993.12 ORF98754 - 1.8 8.9 8.6 1.5 9.2 6.8 1.9 1 1 0 1 1 1 0 Domain of Unknown Function (DUF349) Syntaxin-6_N PF09177.11 ORF98754 - 2.2 8.9 9.2 0.88 10.2 4.9 2.0 1 1 1 2 2 2 0 Syntaxin 6, N-terminal LMBR1 PF04791.16 ORF98754 - 2.5 6.9 5.7 2.7 6.8 5.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein PhoU PF01895.19 ORF98754 - 2.7 8.5 8.2 1.7 9.1 1.4 2.2 1 1 1 2 2 2 0 PhoU domain FAM76 PF16046.5 ORF98754 - 2.7 7.3 13.2 7.5 5.8 13.2 1.7 1 1 0 1 1 1 0 FAM76 protein DUF948 PF06103.11 ORF98754 - 3.2 8.1 6.2 26 5.2 6.2 2.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Cas6b_C PF17262.2 ORF98754 - 3.5 7.8 6.4 15 5.7 1.3 2.1 1 1 1 2 2 2 0 Cas6b C-terminal domain DivIC PF04977.15 ORF98754 - 4.5 7.1 9.6 3.9 7.3 3.1 2.8 1 1 2 3 3 3 0 Septum formation initiator Peptidase_C1 PF00112.23 ORF98535 - 1.8e-23 83.8 0.3 1.8e-23 83.8 0.3 1.4 1 1 1 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF98535 - 7.6e-05 21.7 0.1 9.7e-05 21.3 0.1 1.1 1 0 0 1 1 1 1 Peptidase C1-like family Vps36-NZF-N PF16988.5 ORF98535 - 0.2 11.1 0.9 0.29 10.5 0.9 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain GAPT PF11770.8 ORF96517 - 0.058 13.3 7.4 0.071 13.0 7.4 1.1 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) RSB_motif PF16294.5 ORF96517 - 0.17 12.2 6.4 0.25 11.6 6.4 1.4 1 1 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif Pinin_SDK_memA PF04696.13 ORF96517 - 0.33 11.0 10.9 0.53 10.4 10.9 1.4 1 1 0 1 1 1 0 pinin/SDK/memA/ protein conserved region Pga1 PF10333.9 ORF95421 - 0.83 9.5 4.0 0.49 10.2 2.0 1.5 1 1 0 1 1 1 0 GPI-Mannosyltransferase II co-activator Ribosomal_S8 PF00410.19 ORF94623 - 4.4e-49 165.7 0.1 4.9e-49 165.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 CENP-F_leu_zip PF10473.9 ORF94556 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF94556 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF94556 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF94556 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF94556 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF94556 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF94556 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF94556 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF94556 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF94556 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF94556 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF94556 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF94556 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF94556 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF94556 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF94556 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF94556 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF94556 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF94556 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF94556 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF94556 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF94556 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF94556 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF94556 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF94556 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF94556 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF94556 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF94556 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF94556 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF94556 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF94556 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF94556 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF94556 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF94556 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF94556 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF94556 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF94556 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF94556 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain GED PF02212.18 ORF9368 - 2.8e-12 46.6 6.0 3.5e-12 46.3 6.0 1.1 1 0 0 1 1 1 1 Dynamin GTPase effector domain Tweety PF04906.13 ORF9368 - 0.18 10.4 0.6 0.21 10.2 0.6 1.1 1 0 0 1 1 1 0 Tweety CENP-F_leu_zip PF10473.9 ORF93382 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF93382 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF93382 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF93382 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF93382 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF93382 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF93382 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF93382 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF93382 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF93382 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF93382 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF93382 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF93382 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF93382 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF93382 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF93382 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF93382 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF93382 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF93382 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF93382 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF93382 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF93382 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF93382 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF93382 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF93382 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF93382 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF93382 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF93382 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF93382 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF93382 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF93382 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF93382 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF93382 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF93382 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF93382 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF93382 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF93382 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF93382 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain MFS_1 PF07690.16 ORF93135 - 7.5e-05 21.8 1.0 0.00011 21.3 1.0 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF93135 - 0.00011 21.2 0.2 0.00012 21.1 0.2 1.1 1 0 0 1 1 1 1 MFS_1 like family MFS_2 PF13347.6 ORF93135 - 0.00034 19.3 0.1 0.00035 19.3 0.1 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein EF-hand_1 PF00036.32 ORF92942 - 1.2e-32 109.0 16.5 1.9e-09 36.4 0.8 4.1 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF92942 - 3.3e-24 85.1 7.6 4.1e-13 49.6 2.6 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF92942 - 1.2e-23 80.9 13.2 2.4e-08 33.2 0.9 4.1 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF92942 - 4.9e-21 74.3 12.6 6.1e-06 26.0 0.5 4.0 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF92942 - 1.9e-20 71.4 12.7 4.3e-07 29.1 2.3 4.3 4 0 0 4 4 4 4 EF hand SPARC_Ca_bdg PF10591.9 ORF92942 - 5.5e-10 39.6 2.0 3.3e-05 24.2 0.6 2.0 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF92942 - 4.5e-06 26.6 5.7 0.0052 16.7 2.0 2.5 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF92942 - 0.0056 17.0 0.4 0.15 12.4 0.2 2.8 1 1 2 3 3 3 1 EF-hand domain EF-hand_13 PF17958.1 ORF92942 - 0.012 15.4 0.0 0.12 12.2 0.0 2.4 1 1 0 2 2 2 0 EF-hand domain Caleosin PF05042.13 ORF92942 - 0.012 15.6 1.0 5.4 6.9 0.0 3.2 1 1 1 3 3 3 0 Caleosin related protein PBP_GOBP PF01395.22 ORF92942 - 0.041 14.1 0.5 0.077 13.2 0.4 1.5 1 1 0 1 1 1 0 PBP/GOBP family Dockerin_1 PF00404.18 ORF92942 - 0.1 12.8 9.8 0.5 10.6 1.0 3.6 1 1 2 3 3 3 0 Dockerin type I domain HTH_Tnp_IS630 PF01710.16 ORF92942 - 0.17 11.9 3.3 5.9 7.0 0.6 2.1 1 1 1 2 2 2 0 Transposase CENP-F_leu_zip PF10473.9 ORF92743 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF92743 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF92743 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF92743 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF92743 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF92743 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF92743 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF92743 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF92743 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF92743 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF92743 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF92743 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF92743 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF92743 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF92743 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF92743 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF92743 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF92743 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF92743 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF92743 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF92743 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF92743 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF92743 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF92743 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF92743 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF92743 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF92743 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF92743 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF92743 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF92743 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF92743 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF92743 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF92743 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF92743 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF92743 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF92743 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF92743 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF92743 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain Ribosomal_S8 PF00410.19 ORF92466 - 1.3e-21 76.9 0.2 2.4e-21 76.0 0.2 1.4 1 1 0 1 1 1 1 Ribosomal protein S8 FAST_2 PF08368.12 ORF92466 - 0.16 12.7 0.3 8.2 7.3 0.0 2.6 3 0 0 3 3 3 0 FAST kinase-like protein, subdomain 2 Rib_5-P_isom_A PF06026.14 ORF92052 - 1.4e-44 151.7 0.2 1.6e-44 151.6 0.2 1.0 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Ank_5 PF13857.6 ORF91322 - 7.3e-10 38.9 0.2 0.00018 21.7 0.0 2.9 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF91322 - 1e-07 32.4 0.2 5.9e-07 30.0 0.1 1.9 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF91322 - 4.9e-05 23.6 0.0 0.35 11.4 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF91322 - 0.0001 22.5 0.0 0.47 11.2 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF91322 - 0.0018 18.8 0.3 0.11 13.1 0.1 2.8 2 1 1 3 3 3 2 Ankyrin repeats (many copies) CarS-like PF01864.17 ORF90398 - 0.19 11.7 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 CDP-archaeol synthase Swi3 PF07962.12 ORF89250 - 0.012 15.5 0.9 0.45 10.5 0.1 2.4 1 1 1 2 2 2 0 Replication Fork Protection Component Swi3 Phage_Gp111 PF07410.11 ORF89250 - 0.14 12.7 2.4 0.17 12.4 2.4 1.1 1 0 0 1 1 1 0 Streptococcus thermophilus bacteriophage Gp111 protein Peripla_BP_4 PF13407.6 ORF88118 - 3.8e-18 66.0 5.8 4.6e-18 65.7 5.8 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_3 PF13377.6 ORF88118 - 3.6e-05 24.2 0.3 4.2e-05 23.9 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF88118 - 0.00062 19.3 0.5 0.0008 18.9 0.5 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family PG_binding_1 PF01471.18 ORF87887 - 0.021 15.0 0.1 0.12 12.6 0.0 2.0 1 1 1 2 2 2 0 Putative peptidoglycan binding domain PG_binding_3 PF09374.10 ORF87887 - 0.023 14.9 0.1 0.36 11.1 0.0 2.2 1 1 1 2 2 2 0 Predicted Peptidoglycan domain WRW PF10206.9 ORF87887 - 0.13 12.6 0.0 0.2 12.0 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f Ribosomal_60s PF00428.19 ORF87887 - 5.3 7.7 11.5 0.046 14.3 3.7 1.6 2 0 0 2 2 2 0 60s Acidic ribosomal protein DUF4943 PF16301.5 ORF86764 - 0.017 15.1 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4943) DUF92 PF01940.16 ORF86583 - 0.083 12.3 0.1 0.093 12.1 0.1 1.2 1 1 0 1 1 1 0 Integral membrane protein DUF92 Ferlin_C PF16165.5 ORF86583 - 2.6 8.0 7.2 0.16 11.9 1.2 1.9 1 1 1 2 2 2 0 Ferlin C-terminus LRR_4 PF12799.7 ORF86320 - 8.9e-14 51.4 11.4 4.8e-05 23.6 0.0 2.8 1 1 3 4 4 4 4 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF86320 - 2.8e-11 43.2 0.3 7.8e-06 25.5 0.0 2.0 1 1 1 2 2 2 2 Leucine-rich repeat LRR_8 PF13855.6 ORF86320 - 0.00014 21.6 5.3 0.057 13.2 0.6 2.5 1 1 1 2 2 2 2 Leucine rich repeat LRR_1 PF00560.33 ORF86320 - 0.046 14.3 1.6 25 6.0 0.1 3.3 3 0 0 3 3 3 0 Leucine Rich Repeat Imm-NTF2-2 PF15631.6 ORF86320 - 0.12 12.7 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 NTF2 fold immunity protein LRR_6 PF13516.6 ORF86320 - 0.21 11.7 2.6 10 6.5 0.3 3.1 3 0 0 3 3 3 0 Leucine Rich repeat EF-hand_1 PF00036.32 ORF8415 - 1.6e-11 42.9 0.8 4.3e-05 22.8 0.2 2.4 2 0 0 2 2 2 2 EF hand Ion_trans_2 PF07885.16 ORF8415 - 3.2e-11 43.0 3.8 4.7e-11 42.5 3.8 1.2 1 0 0 1 1 1 1 Ion channel EF-hand_7 PF13499.6 ORF8415 - 6.5e-10 39.3 0.1 1e-09 38.7 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF8415 - 6.5e-10 38.1 1.2 0.00043 20.0 0.2 2.7 1 1 2 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF8415 - 2.6e-08 33.6 0.1 0.0025 17.7 0.0 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF8415 - 0.00012 21.4 0.2 0.042 13.4 0.1 2.4 2 0 0 2 2 2 2 EF hand TMEM43 PF07787.12 ORF8415 - 0.08 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 Septin PF00735.18 ORF83606 - 0.14 11.5 2.1 0.24 10.6 2.1 1.6 1 1 0 1 1 1 0 Septin HSP70 PF00012.20 ORF83533 - 1.5e-12 46.6 6.3 1.6e-12 46.4 6.3 1.0 1 0 0 1 1 1 1 Hsp70 protein Spc7 PF08317.11 ORF83533 - 0.57 9.0 3.9 0.69 8.7 3.9 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Ribosomal_60s PF00428.19 ORF83533 - 2.2 8.9 13.7 0.06 13.9 4.2 2.1 2 0 0 2 2 2 0 60s Acidic ribosomal protein Prefoldin_2 PF01920.20 ORF8352 - 1.7e-19 69.7 16.9 2.3e-19 69.3 16.9 1.2 1 0 0 1 1 1 1 Prefoldin subunit DUF1664 PF07889.12 ORF8352 - 0.029 14.4 3.2 0.029 14.4 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF8352 - 0.033 14.6 1.7 0.033 14.6 1.7 3.2 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) SpoVT_C PF15714.5 ORF8352 - 0.035 14.2 1.0 0.035 14.2 1.0 2.1 1 1 1 2 2 2 0 Stage V sporulation protein T C-terminal, transcription factor SKA2 PF16740.5 ORF8352 - 0.049 13.4 12.7 0.27 11.0 1.7 2.2 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 ING PF12998.7 ORF8352 - 0.14 12.8 10.3 0.22 12.1 0.8 2.2 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding FIVAR PF07554.13 ORF8352 - 0.35 11.6 7.5 1.9 9.3 2.1 3.1 2 1 0 2 2 2 0 FIVAR domain Syntaxin_2 PF14523.6 ORF8352 - 0.52 10.7 13.9 0.11 12.8 3.2 2.2 1 1 1 2 2 2 0 Syntaxin-like protein Spectrin PF00435.21 ORF8352 - 0.8 10.2 15.3 1.7 9.2 5.7 2.4 2 1 0 2 2 2 0 Spectrin repeat Prefoldin PF02996.17 ORF8352 - 0.82 9.6 16.3 1.7e+02 2.1 16.3 2.5 1 1 0 1 1 1 0 Prefoldin subunit DUF737 PF05300.11 ORF8352 - 0.84 10.0 18.3 1 9.7 18.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Fzo_mitofusin PF04799.13 ORF8352 - 0.98 8.9 13.3 0.41 10.2 2.7 2.1 2 0 0 2 2 2 0 fzo-like conserved region MCPsignal PF00015.21 ORF8352 - 1 9.1 9.7 0.35 10.7 2.6 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Rx_N PF18052.1 ORF8352 - 1.2 9.5 11.9 0.16 12.3 0.9 2.2 1 1 1 2 2 2 0 Rx N-terminal domain ABC_tran_CTD PF16326.5 ORF8352 - 1.4 9.2 16.1 0.76 10.1 3.7 2.4 2 0 0 2 2 2 0 ABC transporter C-terminal domain Peptidase_S46 PF10459.9 ORF8352 - 1.8 7.1 11.7 1.9 7.0 11.7 1.0 1 0 0 1 1 1 0 Peptidase S46 Nsp1_C PF05064.13 ORF8352 - 2.6 7.9 14.0 0.19 11.6 2.0 2.2 1 1 1 2 2 2 0 Nsp1-like C-terminal region UPF0242 PF06785.11 ORF8352 - 3.5 7.7 16.7 5.1 7.1 16.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Osmo_CC PF08946.10 ORF8352 - 4.5 7.6 12.3 2.7 8.3 2.9 3.1 2 2 0 2 2 2 0 Osmosensory transporter coiled coil DHR10 PF18595.1 ORF8352 - 4.8 7.3 20.5 3.1 7.9 8.4 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF641 PF04859.12 ORF8352 - 4.9 7.5 15.5 42 4.5 14.0 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) LCIB_C_CA PF18599.1 ORF8352 - 5.3 6.3 10.5 1 8.6 1.5 2.0 1 1 1 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases Spc24 PF08286.11 ORF8352 - 6.3 7.1 13.8 6.2 7.1 2.6 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF8352 - 7.3 7.0 18.8 2.9 8.2 3.4 3.0 2 1 1 3 3 3 0 Tup N-terminal Atg14 PF10186.9 ORF8352 - 9.2 5.2 10.7 19 4.2 10.8 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Prefoldin_2 PF01920.20 ORF83295 - 1.7e-19 69.7 16.9 2.3e-19 69.3 16.9 1.2 1 0 0 1 1 1 1 Prefoldin subunit DUF1664 PF07889.12 ORF83295 - 0.029 14.4 3.2 0.029 14.4 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF83295 - 0.033 14.6 1.7 0.033 14.6 1.7 3.2 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) SpoVT_C PF15714.5 ORF83295 - 0.035 14.2 1.0 0.035 14.2 1.0 2.1 1 1 1 2 2 2 0 Stage V sporulation protein T C-terminal, transcription factor SKA2 PF16740.5 ORF83295 - 0.049 13.4 12.7 0.27 11.0 1.7 2.2 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 ING PF12998.7 ORF83295 - 0.14 12.8 10.3 0.22 12.1 0.8 2.2 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding FIVAR PF07554.13 ORF83295 - 0.35 11.6 7.5 1.9 9.3 2.1 3.1 2 1 0 2 2 2 0 FIVAR domain Syntaxin_2 PF14523.6 ORF83295 - 0.52 10.7 13.9 0.11 12.8 3.2 2.2 1 1 1 2 2 2 0 Syntaxin-like protein Spectrin PF00435.21 ORF83295 - 0.8 10.2 15.3 1.7 9.2 5.7 2.4 2 1 0 2 2 2 0 Spectrin repeat Prefoldin PF02996.17 ORF83295 - 0.82 9.6 16.3 1.7e+02 2.1 16.3 2.5 1 1 0 1 1 1 0 Prefoldin subunit DUF737 PF05300.11 ORF83295 - 0.84 10.0 18.3 1 9.7 18.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Fzo_mitofusin PF04799.13 ORF83295 - 0.98 8.9 13.3 0.41 10.2 2.7 2.1 2 0 0 2 2 2 0 fzo-like conserved region MCPsignal PF00015.21 ORF83295 - 1 9.1 9.7 0.35 10.7 2.6 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Rx_N PF18052.1 ORF83295 - 1.2 9.5 11.9 0.16 12.3 0.9 2.2 1 1 1 2 2 2 0 Rx N-terminal domain ABC_tran_CTD PF16326.5 ORF83295 - 1.4 9.2 16.1 0.76 10.1 3.7 2.4 2 0 0 2 2 2 0 ABC transporter C-terminal domain Peptidase_S46 PF10459.9 ORF83295 - 1.8 7.1 11.7 1.9 7.0 11.7 1.0 1 0 0 1 1 1 0 Peptidase S46 Nsp1_C PF05064.13 ORF83295 - 2.6 7.9 14.0 0.19 11.6 2.0 2.2 1 1 1 2 2 2 0 Nsp1-like C-terminal region UPF0242 PF06785.11 ORF83295 - 3.5 7.7 16.7 5.1 7.1 16.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Osmo_CC PF08946.10 ORF83295 - 4.5 7.6 12.3 2.7 8.3 2.9 3.1 2 2 0 2 2 2 0 Osmosensory transporter coiled coil DHR10 PF18595.1 ORF83295 - 4.8 7.3 20.5 3.1 7.9 8.4 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF641 PF04859.12 ORF83295 - 4.9 7.5 15.5 42 4.5 14.0 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) LCIB_C_CA PF18599.1 ORF83295 - 5.3 6.3 10.5 1 8.6 1.5 2.0 1 1 1 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases Spc24 PF08286.11 ORF83295 - 6.3 7.1 13.8 6.2 7.1 2.6 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF83295 - 7.3 7.0 18.8 2.9 8.2 3.4 3.0 2 1 1 3 3 3 0 Tup N-terminal Atg14 PF10186.9 ORF83295 - 9.2 5.2 10.7 19 4.2 10.8 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 zf-H2C2_2 PF13465.6 ORF8213 - 7.7e-05 22.9 2.0 0.00085 19.6 0.2 2.5 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF8213 - 0.00062 20.1 0.9 0.00062 20.1 0.9 2.3 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF8213 - 0.16 12.9 0.9 0.16 12.9 0.9 2.2 3 0 0 3 3 3 0 C2H2-type zinc finger PRAS PF15798.5 ORF8213 - 0.66 10.6 3.8 1.1 9.8 1.0 2.0 1 1 1 2 2 2 0 Proline-rich AKT1 substrate 1 Binary_toxB_3 PF17476.2 ORF8213 - 1.3 9.2 4.3 1.2 9.4 0.8 2.0 1 1 1 2 2 2 0 Clostridial binary toxin B/anthrax toxin PA domain 3 Dicty_REP PF05086.12 ORF81882 - 9.2 4.1 10.9 11 3.9 10.9 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein rve_2 PF13333.6 ORF80252 - 0.06 13.5 0.7 0.17 12.1 0.5 1.8 2 0 0 2 2 2 0 Integrase core domain CENP-F_leu_zip PF10473.9 ORF79741 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF79741 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF79741 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF79741 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF79741 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF79741 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF79741 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF79741 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF79741 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF79741 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF79741 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF79741 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF79741 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF79741 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF79741 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF79741 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF79741 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF79741 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF79741 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF79741 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF79741 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF79741 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF79741 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF79741 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF79741 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF79741 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF79741 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF79741 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF79741 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF79741 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF79741 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF79741 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF79741 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF79741 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF79741 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF79741 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF79741 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF79741 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain WD40 PF00400.32 ORF79663 - 0.023 15.5 0.1 0.78 10.7 0.0 2.3 2 0 0 2 2 2 0 WD domain, G-beta repeat NUP PF06516.11 ORF79024 - 1e-18 67.6 0.0 1.3e-18 67.3 0.0 1.0 1 0 0 1 1 1 1 Purine nucleoside permease (NUP) DUF3117 PF11314.8 ORF78805 - 0.092 12.6 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3117) HBS1_N PF08938.10 ORF7866 - 0.0027 18.0 0.1 0.0085 16.4 0.0 1.9 2 0 0 2 2 2 1 HBS1 N-terminus EELM2 PF15863.5 ORF7866 - 0.011 15.9 0.1 0.014 15.5 0.1 1.2 1 0 0 1 1 1 0 Extended EGL-27 and MTA1 homology domain UBA PF00627.31 ORF7866 - 0.036 14.0 0.1 0.036 14.0 0.1 2.2 3 0 0 3 3 3 0 UBA/TS-N domain Methyltransf_16 PF10294.9 ORF78454 - 0.19 11.5 2.3 0.3 10.8 2.0 1.4 1 1 0 1 1 1 0 Lysine methyltransferase TMEMspv1-c74-12 PF11044.8 ORF77578 - 0.53 10.3 0.1 0.53 10.3 0.1 1.9 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF5526 PF17664.1 ORF77109 - 0.033 13.7 0.1 0.042 13.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5526) Ribosomal_L7Ae PF01248.26 ORF77092 - 1.9e-25 88.4 0.0 2.5e-25 88.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 ORF77092 - 0.00021 21.1 0.0 0.00027 20.8 0.0 1.2 1 0 0 1 1 1 1 PELOTA RNA binding domain RNase_P_pop3 PF08228.11 ORF77092 - 0.0029 17.7 0.1 0.0031 17.6 0.1 1.1 1 0 0 1 1 1 1 RNase P subunit Pop3 LPP PF04728.13 ORF77092 - 0.11 12.9 1.8 0.41 11.1 0.5 2.1 2 0 0 2 2 2 0 Lipoprotein leucine-zipper DUF1798 PF08807.10 ORF76921 - 0.038 14.1 0.3 0.07 13.3 0.3 1.5 1 0 0 1 1 1 0 Bacterial domain of unknown function (DUF1798) TFIIB PF00382.19 ORF76253 - 3.4e-06 27.0 0.1 4.8e-06 26.5 0.1 1.2 1 0 0 1 1 1 1 Transcription factor TFIIB repeat RSRP PF17069.5 ORF7560 - 0.11 12.0 2.6 0.17 11.4 2.6 1.2 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 TetR_C_15 PF17918.1 ORF73994 - 0.057 14.2 0.1 0.087 13.6 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain ADP_ribosyl_GH PF03747.14 ORF73367 - 1.8e-14 54.1 0.0 2.8e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase CRISPR_assoc PF08798.11 ORF72889 - 0.012 15.7 0.1 0.015 15.4 0.1 1.0 1 0 0 1 1 1 0 CRISPR associated protein Herpes_U47 PF05467.11 ORF72872 - 0.23 9.6 0.0 0.28 9.3 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 KELK PF15796.5 ORF72319 - 0.0041 17.6 4.7 0.0041 17.6 4.7 2.0 2 1 0 2 2 2 1 KELK-motif containing domain of MRCK Ser/Thr protein kinase RecG_N PF17190.4 ORF72319 - 0.0066 17.2 0.6 0.01 16.5 0.6 1.4 1 0 0 1 1 1 1 RecG N-terminal helical domain Golgin_A5 PF09787.9 ORF72319 - 0.066 12.7 8.1 0.073 12.5 8.1 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 Spc7 PF08317.11 ORF72319 - 0.088 11.7 7.1 0.1 11.4 7.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Histone_H2A_C PF16211.5 ORF71081 - 2.6e-16 59.1 0.1 4.1e-16 58.4 0.1 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 ORF71081 - 5.9e-15 55.8 0.0 7e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF71081 - 8.5e-06 26.0 0.0 1.3e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone SNF PF00209.18 ORF70441 - 1.7e-26 93.0 9.6 2e-26 92.8 9.6 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF2207 PF09972.9 ORF70441 - 0.083 11.6 0.7 0.091 11.5 0.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Cytochrom_B_C PF00032.17 ORF69602 - 0.068 13.5 0.1 0.091 13.1 0.1 1.3 1 0 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD DUF2615 PF11027.8 ORF69602 - 0.072 13.2 4.1 0.19 11.9 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2615) Cytochrom_B_C PF00032.17 ORF69109 - 0.068 13.5 0.1 0.091 13.1 0.1 1.3 1 0 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD DUF2615 PF11027.8 ORF69109 - 0.072 13.2 4.1 0.19 11.9 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2615) Ndc1_Nup PF09531.10 ORF68224 - 3.7 6.1 5.0 4.1 6.0 5.0 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup FOP_dimer PF09398.10 ORF67696 - 1.4e-10 41.3 0.1 2.5e-10 40.5 0.1 1.4 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF67696 - 1.3e-06 27.3 0.1 2.1e-06 26.6 0.1 1.4 1 0 0 1 1 1 1 LisH EnY2 PF10163.9 ORF67696 - 0.1 13.0 0.1 2.1 8.8 0.0 2.0 1 1 1 2 2 2 0 Transcription factor e(y)2 SatD PF16264.5 ORF67430 - 0.0012 18.5 0.8 0.0023 17.6 0.8 1.4 1 0 0 1 1 1 1 SatD family (SatD) 4HB_MCP_1 PF12729.7 ORF67430 - 0.077 12.5 10.0 1.2 8.6 7.8 2.1 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction DUF4994 PF16385.5 ORF67430 - 0.11 12.4 2.9 0.21 11.5 2.9 1.4 1 0 0 1 1 1 0 Domain of unknown function RE_CfrBI PF09516.10 ORF67430 - 0.12 11.8 8.3 0.14 11.5 8.3 1.0 1 0 0 1 1 1 0 CfrBI restriction endonuclease NigD_C PF17415.2 ORF67430 - 0.2 11.7 5.5 0.33 11.0 5.5 1.4 1 0 0 1 1 1 0 NigD-like C-terminal beta sandwich domain DUF1779 PF08680.10 ORF67430 - 0.24 11.6 8.0 0.54 10.4 7.5 1.6 1 1 1 2 2 2 0 TATA-box binding PIN_8 PF18476.1 ORF67430 - 0.24 11.2 12.7 0.43 10.4 12.7 1.5 1 1 0 1 1 1 0 PIN like domain PDCD2_C PF04194.13 ORF67430 - 0.29 11.2 5.1 0.42 10.7 5.1 1.2 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain MYO10_CC PF16735.5 ORF67430 - 2.4 8.3 13.1 2.7 8.1 5.5 2.4 2 0 0 2 2 2 0 Unconventional myosin-X coiled coil domain EF-hand_7 PF13499.6 ORF67202 - 0.0089 16.5 0.0 0.13 12.7 0.0 2.1 1 1 0 1 1 1 1 EF-hand domain pair YjbT PF17089.5 ORF66991 - 0.05 13.6 0.1 0.075 13.1 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family BOF PF04076.13 ORF64892 - 1.6e-47 159.8 1.3 1.9e-47 159.5 1.3 1.1 1 0 0 1 1 1 1 Bacterial OB fold (BOF) protein Dpy-30 PF05186.13 ORF64868 - 0.1 12.3 0.0 1.2 8.8 0.0 2.1 2 0 0 2 2 2 0 Dpy-30 motif Prefoldin_2 PF01920.20 ORF64852 - 1.7e-19 69.7 16.9 2.3e-19 69.3 16.9 1.2 1 0 0 1 1 1 1 Prefoldin subunit DUF1664 PF07889.12 ORF64852 - 0.029 14.4 3.2 0.029 14.4 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF64852 - 0.033 14.6 1.7 0.033 14.6 1.7 3.2 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) SpoVT_C PF15714.5 ORF64852 - 0.035 14.2 1.0 0.035 14.2 1.0 2.1 1 1 1 2 2 2 0 Stage V sporulation protein T C-terminal, transcription factor SKA2 PF16740.5 ORF64852 - 0.049 13.4 12.7 0.27 11.0 1.7 2.2 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 ING PF12998.7 ORF64852 - 0.14 12.8 10.3 0.22 12.1 0.8 2.2 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding FIVAR PF07554.13 ORF64852 - 0.35 11.6 7.5 1.9 9.3 2.1 3.1 2 1 0 2 2 2 0 FIVAR domain Syntaxin_2 PF14523.6 ORF64852 - 0.52 10.7 13.9 0.11 12.8 3.2 2.2 1 1 1 2 2 2 0 Syntaxin-like protein Spectrin PF00435.21 ORF64852 - 0.8 10.2 15.3 1.7 9.2 5.7 2.4 2 1 0 2 2 2 0 Spectrin repeat Prefoldin PF02996.17 ORF64852 - 0.82 9.6 16.3 1.7e+02 2.1 16.3 2.5 1 1 0 1 1 1 0 Prefoldin subunit DUF737 PF05300.11 ORF64852 - 0.84 10.0 18.3 1 9.7 18.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Fzo_mitofusin PF04799.13 ORF64852 - 0.98 8.9 13.3 0.41 10.2 2.7 2.1 2 0 0 2 2 2 0 fzo-like conserved region MCPsignal PF00015.21 ORF64852 - 1 9.1 9.7 0.35 10.7 2.6 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Rx_N PF18052.1 ORF64852 - 1.2 9.5 11.9 0.16 12.3 0.9 2.2 1 1 1 2 2 2 0 Rx N-terminal domain ABC_tran_CTD PF16326.5 ORF64852 - 1.4 9.2 16.1 0.76 10.1 3.7 2.4 2 0 0 2 2 2 0 ABC transporter C-terminal domain Peptidase_S46 PF10459.9 ORF64852 - 1.8 7.1 11.7 1.9 7.0 11.7 1.0 1 0 0 1 1 1 0 Peptidase S46 Nsp1_C PF05064.13 ORF64852 - 2.6 7.9 14.0 0.19 11.6 2.0 2.2 1 1 1 2 2 2 0 Nsp1-like C-terminal region UPF0242 PF06785.11 ORF64852 - 3.5 7.7 16.7 5.1 7.1 16.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Osmo_CC PF08946.10 ORF64852 - 4.5 7.6 12.3 2.7 8.3 2.9 3.1 2 2 0 2 2 2 0 Osmosensory transporter coiled coil DHR10 PF18595.1 ORF64852 - 4.8 7.3 20.5 3.1 7.9 8.4 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF641 PF04859.12 ORF64852 - 4.9 7.5 15.5 42 4.5 14.0 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) LCIB_C_CA PF18599.1 ORF64852 - 5.3 6.3 10.5 1 8.6 1.5 2.0 1 1 1 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases Spc24 PF08286.11 ORF64852 - 6.3 7.1 13.8 6.2 7.1 2.6 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF64852 - 7.3 7.0 18.8 2.9 8.2 3.4 3.0 2 1 1 3 3 3 0 Tup N-terminal Atg14 PF10186.9 ORF64852 - 9.2 5.2 10.7 19 4.2 10.8 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Ribosomal_L20 PF00453.18 ORF63874 - 8e-30 103.1 0.6 1e-29 102.8 0.6 1.1 1 0 0 1 1 1 1 Ribosomal protein L20 MurB_C PF02873.16 ORF63664 - 2.1e-38 131.1 0.0 2.3e-38 130.9 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Myosin_tail_1 PF01576.19 ORF6307 - 0.00028 18.9 20.2 0.0003 18.8 20.2 1.0 1 0 0 1 1 1 1 Myosin tail DivIC PF04977.15 ORF6307 - 0.0059 16.4 22.0 0.0062 16.3 3.0 2.9 1 1 2 3 3 3 2 Septum formation initiator ATG16 PF08614.11 ORF6307 - 0.009 16.3 19.5 0.012 15.9 19.5 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) SlyX PF04102.12 ORF6307 - 0.052 14.2 4.0 0.052 14.2 4.0 2.6 1 1 1 2 2 2 0 SlyX DUF641 PF04859.12 ORF6307 - 0.39 11.1 16.5 0.32 11.3 15.2 1.6 2 0 0 2 2 1 0 Plant protein of unknown function (DUF641) DUF4407 PF14362.6 ORF6307 - 0.39 10.0 17.3 0.62 9.4 17.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Herpes_UL6 PF01763.16 ORF6307 - 0.45 9.0 10.1 0.49 8.9 10.1 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like Pox_A_type_inc PF04508.12 ORF6307 - 0.45 10.4 12.0 5.1 7.1 0.1 4.6 4 0 0 4 4 4 0 Viral A-type inclusion protein repeat DUF1192 PF06698.11 ORF6307 - 0.55 10.3 8.4 2.6 8.2 0.4 2.9 2 2 0 2 2 2 0 Protein of unknown function (DUF1192) Relaxase PF03432.14 ORF6307 - 0.65 9.6 14.5 0.86 9.2 14.5 1.1 1 0 0 1 1 1 0 Relaxase/Mobilisation nuclease domain Fez1 PF06818.15 ORF6307 - 0.83 10.1 23.2 0.34 11.3 20.5 1.6 1 1 1 2 2 2 0 Fez1 HD_2 PF12917.7 ORF6307 - 0.87 9.3 9.9 1.1 9.0 9.7 1.3 1 1 0 1 1 1 0 HD containing hydrolase-like enzyme ZYG-11_interact PF05884.12 ORF6307 - 0.93 8.8 3.4 1.7 8.0 3.4 1.5 1 1 1 2 2 2 0 Interactor of ZYG-11 DUF3584 PF12128.8 ORF6307 - 2 5.8 22.0 2.1 5.7 22.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) APG6_N PF17675.1 ORF6307 - 2.1 8.9 26.1 3.1 8.3 26.1 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region TMF_DNA_bd PF12329.8 ORF6307 - 3.6 7.6 32.9 0.088 12.8 22.7 2.3 1 1 1 2 2 1 0 TATA element modulatory factor 1 DNA binding PNPase PF03726.14 ORF6307 - 3.7 8.1 14.1 18 5.9 14.1 2.0 1 1 0 1 1 1 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain Golgin_A5 PF09787.9 ORF6307 - 3.8 6.9 21.4 4.5 6.7 21.4 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 XRN_M PF17846.1 ORF6307 - 4.9 6.0 11.5 5.9 5.7 11.5 1.2 1 0 0 1 1 1 0 Xrn1 helical domain UPF0242 PF06785.11 ORF6307 - 7 6.7 26.9 9 6.3 26.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4239 PF14023.6 ORF6307 - 7.2 6.3 6.6 21 4.8 5.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4239) NPV_P10 PF05531.12 ORF6307 - 7.5 7.1 10.4 0.72 10.4 2.8 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF2407_C PF13373.6 ORF6307 - 8.6 6.5 7.0 12 6.1 7.0 1.2 1 0 0 1 1 1 0 DUF2407 C-terminal domain Got1 PF04178.12 ORF62594 - 6.9e-11 42.6 19.6 1.3e-10 41.7 19.6 1.5 1 1 0 1 1 1 1 Got1/Sft2-like family DUF4805 PF16063.5 ORF62256 - 0.017 14.5 0.8 0.017 14.5 0.8 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4805) TPR_17 PF13431.6 ORF61969 - 0.0027 18.0 0.1 0.79 10.2 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat Abhydrolase_1 PF00561.20 ORF61070 - 1.9e-08 34.3 0.0 2.3e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold LIDHydrolase PF10230.9 ORF61070 - 0.0069 16.0 0.0 0.0092 15.6 0.0 1.3 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase S1 PF00575.23 ORF60320 - 0.13 12.7 1.5 2.9 8.3 0.0 2.1 2 0 0 2 2 2 0 S1 RNA binding domain ADP_ribosyl_GH PF03747.14 ORF56318 - 2.8e-14 53.5 0.0 3.5e-14 53.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase HBS1_N PF08938.10 ORF55181 - 0.0027 18.0 0.1 0.0085 16.4 0.0 1.9 2 0 0 2 2 2 1 HBS1 N-terminus EELM2 PF15863.5 ORF55181 - 0.011 15.9 0.1 0.014 15.5 0.1 1.2 1 0 0 1 1 1 0 Extended EGL-27 and MTA1 homology domain UBA PF00627.31 ORF55181 - 0.036 14.0 0.1 0.036 14.0 0.1 2.2 3 0 0 3 3 3 0 UBA/TS-N domain EbsA PF17255.2 ORF54601 - 0.018 15.4 0.9 0.018 15.4 0.9 1.6 2 0 0 2 2 2 0 EbsA-like protein MerR_1 PF13411.6 ORF53710 - 0.31 11.2 2.6 0.39 10.8 0.1 2.2 2 1 1 3 3 3 0 MerR HTH family regulatory protein DUF1560 PF07597.11 ORF53553 - 0.1 12.7 0.3 0.39 10.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1560) NIF PF03031.18 ORF53143 - 1.6e-26 92.9 0.1 2.2e-26 92.5 0.1 1.2 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Hydrolase PF00702.26 ORF53143 - 0.051 13.9 0.3 8.7 6.6 0.4 2.1 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase LAT2 PF15703.5 ORF53131 - 0.069 13.0 7.1 0.1 12.5 7.1 1.3 1 1 0 1 1 1 0 Linker for activation of T-cells family member 2 DivIC PF04977.15 ORF53131 - 0.97 9.3 5.8 1.8 8.4 1.7 2.2 2 0 0 2 2 2 0 Septum formation initiator Fib_alpha PF08702.10 ORF53131 - 5.2 7.2 11.0 0.23 11.6 2.8 2.1 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Voltage_CLC PF00654.20 ORF52509 - 0.089 12.0 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 Voltage gated chloride channel Gal-bind_lectin PF00337.22 ORF52509 - 0.2 11.2 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 Galactoside-binding lectin Alpha-amyl_C2 PF07821.12 ORF52439 - 7.2e-09 35.8 0.0 1e-08 35.2 0.0 1.2 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain Phage_TAC_3 PF06896.11 ORF52355 - 0.032 14.8 2.0 0.051 14.2 2.0 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone proteins, TAC FAM177 PF14774.6 ORF52 - 0.078 13.4 1.6 4.4 7.7 0.1 2.1 2 0 0 2 2 2 0 FAM177 family 5-FTHF_cyc-lig PF01812.20 ORF51267 - 4.1e-21 75.7 0.0 4.9e-21 75.4 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Tetraspanin PF00335.20 ORF50644 - 0.044 13.5 0.3 0.048 13.4 0.3 1.2 1 0 0 1 1 1 0 Tetraspanin family FHA PF00498.26 ORF50304 - 0.00017 21.9 0.1 0.00034 20.9 0.1 1.6 1 0 0 1 1 1 1 FHA domain RINGv PF12906.7 ORF50304 - 0.0034 17.5 3.3 0.006 16.7 3.3 1.4 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF50304 - 0.015 15.5 2.4 0.026 14.7 2.4 1.4 1 0 0 1 1 1 0 FANCL C-terminal domain Yop-YscD_cpl PF16697.5 ORF50304 - 0.024 14.9 0.0 0.043 14.1 0.0 1.4 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain CBM_26 PF16824.5 ORF50304 - 0.077 13.1 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 C-terminal carbohydrate-binding module Hemopexin PF00045.19 ORF50304 - 0.12 12.3 3.1 0.42 10.6 0.1 2.5 3 0 0 3 3 3 0 Hemopexin Neurokinin_B PF03823.14 ORF49996 - 0.33 11.0 0.0 0.33 11.0 0.0 1.8 2 0 0 2 2 2 0 Neurokinin B DUF2160 PF09928.9 ORF49660 - 0.12 12.7 0.1 0.19 12.1 0.1 1.5 1 1 0 1 1 1 0 Predicted small integral membrane protein (DUF2160) DUF3624 PF12292.8 ORF49065 - 0.054 13.9 1.9 0.13 12.7 0.7 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3624) EamA PF00892.20 ORF49065 - 1 9.5 9.5 0.096 12.9 5.1 1.5 2 0 0 2 2 2 0 EamA-like transporter family DUF5344 PF17279.2 ORF48278 - 0.083 13.5 0.1 0.14 12.7 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5344) Arm-DNA-bind_5 PF17293.2 ORF48064 - 0.0022 18.4 0.4 0.003 18.0 0.4 1.2 1 0 0 1 1 1 1 Arm DNA-binding domain Mo25 PF08569.11 ORF48064 - 0.012 14.9 1.6 0.015 14.7 1.6 1.0 1 0 0 1 1 1 0 Mo25-like GLTP PF08718.11 ORF48064 - 0.1 12.9 0.7 0.14 12.4 0.7 1.2 1 0 0 1 1 1 0 Glycolipid transfer protein (GLTP) Med9 PF07544.13 ORF48064 - 0.55 10.4 8.7 0.5 10.5 6.9 1.8 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 PHTB1_C PF14728.6 ORF48064 - 1.3 8.0 7.8 1.6 7.7 7.8 1.0 1 0 0 1 1 1 0 PTHB1 C-terminus Fzo_mitofusin PF04799.13 ORF48064 - 1.7 8.2 5.9 1.5 8.4 1.8 1.9 1 1 1 2 2 2 0 fzo-like conserved region XAP5 PF04921.14 ORF46701 - 5.5e-08 32.9 1.0 1e-07 32.1 1.0 1.4 1 1 0 1 1 1 1 XAP5, circadian clock regulator LINES_C PF14695.6 ORF46701 - 0.26 10.8 2.5 0.39 10.2 0.8 2.0 1 1 1 2 2 2 0 Lines C-terminus YCII PF03795.14 ORF46412 - 4.1e-29 100.8 0.0 4.8e-29 100.6 0.0 1.1 1 0 0 1 1 1 1 YCII-related domain DUF1330 PF07045.11 ORF46412 - 0.0026 18.1 0.0 0.004 17.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1330) DUF3828 PF12883.7 ORF46412 - 0.008 16.5 0.0 0.71 10.2 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF3828) Ribosomal_L21e PF01157.18 ORF46412 - 0.056 13.3 0.0 0.075 12.9 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L21e zinc_ribbon_10 PF10058.9 ORF46217 - 0.023 14.4 1.0 0.043 13.5 1.0 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Xlink PF00193.17 ORF45516 - 0.22 11.9 3.4 0.39 11.1 3.4 1.4 1 0 0 1 1 1 0 Extracellular link domain MatE PF01554.18 ORF4517 - 1.4e-10 41.1 1.9 1.7e-10 40.8 1.9 1.1 1 0 0 1 1 1 1 MatE CENP-F_leu_zip PF10473.9 ORF44382 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF44382 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF44382 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF44382 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF44382 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF44382 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF44382 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF44382 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF44382 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF44382 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF44382 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF44382 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF44382 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF44382 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF44382 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF44382 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF44382 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF44382 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF44382 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF44382 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF44382 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF44382 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF44382 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF44382 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF44382 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF44382 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF44382 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF44382 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF44382 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF44382 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF44382 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF44382 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF44382 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF44382 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF44382 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF44382 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF44382 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF44382 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain SRI PF08236.11 ORF44075 - 0.065 13.4 0.2 0.15 12.2 0.1 1.8 1 1 1 2 2 2 0 SRI (Set2 Rpb1 interacting) domain Ank_4 PF13637.6 ORF44073 - 7.3e-14 51.9 0.1 1.6e-05 25.3 0.0 2.4 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF44073 - 1.3e-13 51.3 0.0 1.8e-13 50.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF44073 - 4.2e-12 45.1 0.1 0.00042 20.5 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF44073 - 5.7e-12 45.6 0.0 0.00047 20.4 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF44073 - 2e-07 31.1 0.0 0.066 13.7 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat HTH_21 PF13276.6 ORF44073 - 0.02 15.0 0.0 0.078 13.1 0.0 1.9 1 1 0 1 1 1 0 HTH-like domain PEX11 PF05648.14 ORF43561 - 7.8e-11 41.9 0.0 8.8e-11 41.7 0.0 1.0 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) zf-CCCH PF00642.24 ORF43416 - 0.014 15.3 6.3 0.028 14.3 6.3 1.6 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Hydrolase_4 PF12146.8 ORF42407 - 3.6e-06 26.4 0.0 0.0017 17.7 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 ORF42407 - 0.015 15.2 0.2 0.021 14.7 0.2 1.4 1 1 0 1 1 1 0 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF42407 - 0.028 14.5 0.1 0.034 14.3 0.1 1.3 1 1 0 1 1 1 0 Thioesterase domain Peptidase_S9 PF00326.21 ORF42407 - 0.2 11.1 0.0 0.84 9.1 0.0 1.8 2 0 0 2 2 2 0 Prolyl oligopeptidase family Sec1 PF00995.23 ORF41795 - 1.4e-08 34.5 4.6 1.6e-08 34.3 4.6 1.0 1 0 0 1 1 1 1 Sec1 family CotH PF08757.11 ORF41795 - 0.015 14.8 1.6 0.023 14.2 1.6 1.5 1 1 0 1 1 1 0 CotH kinase protein ABC_tran PF00005.27 ORF41549 - 2.2e-08 34.7 0.2 3.8e-08 33.9 0.0 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF41549 - 1.3e-05 24.8 0.3 1.6e-05 24.4 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DDRGK PF09756.9 ORF41549 - 0.025 14.2 0.3 0.033 13.8 0.3 1.2 1 0 0 1 1 1 0 DDRGK domain PUF PF00806.19 ORF40983 - 1.6e-10 40.0 1.3 0.00016 21.2 0.4 3.4 2 1 0 3 3 3 2 Pumilio-family RNA binding repeat DUF1904 PF08921.11 ORF40983 - 0.057 13.7 1.3 0.077 13.3 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1904) ACDC PF14733.6 ORF40983 - 0.062 13.6 0.6 0.062 13.6 0.6 1.8 2 0 0 2 2 2 0 AP2-coincident C-terminal Cullin PF00888.22 ORF40677 - 2.1e-29 102.6 6.5 2.4e-29 102.5 6.5 1.0 1 0 0 1 1 1 1 Cullin family Carboxyl_trans PF01039.22 ORF40578 - 1.5e-09 37.0 0.0 1.8e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Carboxyl transferase domain Peptidase_C97 PF05903.14 ORF39936 - 3e-17 62.9 0.0 4e-17 62.4 0.0 1.2 1 0 0 1 1 1 1 PPPDE putative peptidase domain Presenilin PF01080.17 ORF3968 - 2.3 6.9 3.6 2.4 6.8 3.6 1.0 1 0 0 1 1 1 0 Presenilin GPW_gp25 PF04965.14 ORF38480 - 1.4e-11 44.0 0.0 1.8e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Gene 25-like lysozyme PUF PF00806.19 ORF36346 - 1.6e-10 40.0 1.3 0.00016 21.2 0.4 3.4 2 1 0 3 3 3 2 Pumilio-family RNA binding repeat DUF1904 PF08921.11 ORF36346 - 0.057 13.7 1.3 0.077 13.3 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1904) ACDC PF14733.6 ORF36346 - 0.062 13.6 0.6 0.062 13.6 0.6 1.8 2 0 0 2 2 2 0 AP2-coincident C-terminal FleQ PF06490.11 ORF3634 - 0.13 12.7 0.0 0.27 11.6 0.0 1.4 1 1 0 1 1 1 0 Flagellar regulatory protein FleQ CENP-F_leu_zip PF10473.9 ORF35981 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF35981 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF35981 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF35981 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF35981 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF35981 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF35981 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF35981 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF35981 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF35981 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF35981 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF35981 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF35981 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF35981 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF35981 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF35981 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF35981 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF35981 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF35981 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF35981 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF35981 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF35981 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF35981 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF35981 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF35981 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF35981 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF35981 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF35981 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF35981 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF35981 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF35981 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF35981 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF35981 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF35981 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF35981 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF35981 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF35981 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF35981 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain EF-hand_7 PF13499.6 ORF3559 - 3.1e-06 27.5 5.5 0.0019 18.6 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF3559 - 4e-06 26.6 3.1 3.2e-05 23.7 0.4 2.8 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF3559 - 1.8e-05 24.3 3.1 9.6e-05 22.0 0.2 3.1 4 0 0 4 4 4 1 EF-hand domain EF-hand_1 PF00036.32 ORF3559 - 6.5e-05 22.2 4.8 0.00012 21.4 0.3 3.2 4 0 0 4 4 4 1 EF hand EF-hand_5 PF13202.6 ORF3559 - 0.0019 17.6 0.0 0.0019 17.6 0.0 2.4 3 1 0 3 3 3 1 EF hand p25-alpha PF05517.12 ORF3559 - 0.075 13.2 0.0 0.98 9.6 0.0 2.1 2 0 0 2 2 2 0 p25-alpha EF-hand_9 PF14658.6 ORF3559 - 0.14 12.5 0.0 0.91 9.9 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain CBM_X2 PF03442.14 ORF34118 - 0.026 14.6 0.2 1.2 9.3 0.0 2.3 2 0 0 2 2 2 0 Carbohydrate binding domain X2 TnsD PF15978.5 ORF32435 - 0.086 11.8 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D DUF3624 PF12292.8 ORF31996 - 0.054 13.9 1.9 0.13 12.7 0.7 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3624) EamA PF00892.20 ORF31996 - 1 9.5 9.5 0.096 12.9 5.1 1.5 2 0 0 2 2 2 0 EamA-like transporter family Apt1 PF10351.9 ORF31701 - 0.0016 17.4 0.6 0.002 17.0 0.6 1.1 1 0 0 1 1 1 1 Golgi-body localisation protein domain PFU PF09070.11 ORF31701 - 0.0068 16.7 0.0 0.01 16.1 0.0 1.3 1 0 0 1 1 1 1 PFU (PLAA family ubiquitin binding) AAA_25 PF13481.6 ORF31701 - 0.022 14.3 0.4 0.032 13.8 0.4 1.2 1 0 0 1 1 1 0 AAA domain NUDE_C PF04880.13 ORF2949 - 0.27 11.7 2.1 0.31 11.5 2.1 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region DUF5526 PF17664.1 ORF29191 - 0.033 13.7 0.1 0.042 13.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5526) Ribosomal_L27A PF00828.19 ORF29110 - 6.4e-13 49.5 0.4 6.4e-13 49.5 0.4 1.6 2 0 0 2 2 2 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CENP-F_leu_zip PF10473.9 ORF26981 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF26981 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF26981 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF26981 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF26981 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF26981 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF26981 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF26981 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF26981 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF26981 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF26981 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF26981 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF26981 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF26981 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF26981 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF26981 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF26981 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF26981 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF26981 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF26981 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF26981 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF26981 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF26981 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF26981 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF26981 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF26981 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF26981 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF26981 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF26981 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF26981 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF26981 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF26981 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF26981 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF26981 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF26981 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF26981 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF26981 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF26981 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain DUF1367 PF07105.11 ORF26295 - 0.075 12.7 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1367) Peptidase_C15 PF01470.17 ORF25152 - 5.5e-15 56.1 0.1 6.4e-15 55.9 0.1 1.0 1 0 0 1 1 1 1 Pyroglutamyl peptidase BChl_A PF02327.17 ORF25152 - 0.12 11.1 0.0 0.14 11.0 0.0 1.0 1 0 0 1 1 1 0 Bacteriochlorophyll A protein NeuB PF03102.14 ORF23725 - 0.06 12.8 0.0 0.074 12.5 0.0 1.1 1 0 0 1 1 1 0 NeuB family Adenylsucc_synt PF00709.21 ORF23725 - 0.09 11.7 0.1 0.12 11.3 0.1 1.1 1 0 0 1 1 1 0 Adenylosuccinate synthetase Glyco_hydro_67N PF03648.14 ORF23725 - 0.11 12.8 0.1 0.16 12.3 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 N-terminus Peptidase_S68 PF10461.9 ORF23322 - 7.9 6.8 8.9 13 6.1 0.7 2.5 2 0 0 2 2 2 0 Peptidase S68 CENP-F_leu_zip PF10473.9 ORF23192 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF23192 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF23192 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF23192 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF23192 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF23192 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF23192 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF23192 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF23192 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF23192 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF23192 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF23192 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF23192 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF23192 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF23192 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF23192 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF23192 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF23192 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF23192 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF23192 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF23192 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF23192 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF23192 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF23192 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF23192 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF23192 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF23192 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF23192 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF23192 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF23192 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF23192 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF23192 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF23192 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF23192 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF23192 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF23192 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF23192 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF23192 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain UCMA PF17085.5 ORF23172 - 0.094 12.7 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Unique cartilage matrix associated protein CCDC154 PF15450.6 ORF21773 - 0.00024 19.8 4.7 0.00024 19.8 4.7 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 154 DUF4407 PF14362.6 ORF21773 - 0.013 14.8 4.3 0.017 14.5 4.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) WD40_alt PF14077.6 ORF21773 - 0.024 14.5 1.5 6.6 6.7 0.3 2.9 2 1 0 2 2 2 0 Alternative WD40 repeat motif Prominin PF05478.11 ORF21773 - 0.03 12.3 2.6 0.032 12.2 2.6 1.0 1 0 0 1 1 1 0 Prominin DUF848 PF05852.11 ORF21773 - 0.066 13.3 7.1 0.12 12.5 7.1 1.5 1 1 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) HlyD_2 PF12700.7 ORF21773 - 0.075 11.8 7.6 0.08 11.7 7.6 1.0 1 0 0 1 1 1 0 HlyD family secretion protein DHHA1 PF02272.19 ORF21773 - 0.075 13.4 4.5 0.11 12.9 4.5 1.2 1 0 0 1 1 1 0 DHHA1 domain DUF4446 PF14584.6 ORF21773 - 0.079 12.9 2.0 0.11 12.5 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF3557 PF12078.8 ORF21773 - 0.08 12.9 0.2 2.9 7.8 0.2 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF3557) Corona_S2 PF01601.16 ORF21773 - 0.11 11.0 1.1 0.13 10.8 1.1 1.1 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein FAM76 PF16046.5 ORF21773 - 0.24 10.7 3.3 0.28 10.5 3.3 1.2 1 0 0 1 1 1 0 FAM76 protein TMPIT PF07851.13 ORF21773 - 0.6 9.3 2.5 0.71 9.1 2.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein Histone_HNS PF00816.21 ORF21773 - 1.9 9.3 5.8 4 8.3 5.8 1.7 1 1 0 1 1 1 0 H-NS histone family Toxin_25 PF08095.11 ORF19892 - 0.26 11.3 6.8 3.7 7.6 0.1 2.5 2 0 0 2 2 2 0 Hefutoxin family RAP PF08373.10 ORF19878 - 0.0018 18.4 0.3 0.0033 17.5 0.3 1.5 1 0 0 1 1 1 1 RAP domain DUF4894 PF16235.5 ORF19878 - 0.027 14.8 0.2 0.036 14.4 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4894) DUF559 PF04480.12 ORF19878 - 0.041 13.7 0.1 0.074 12.9 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF559) DUF5348 PF17295.2 ORF19878 - 0.045 13.7 0.0 0.094 12.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5348) LidA_Long_CC PF18641.1 ORF19878 - 0.053 13.6 0.2 0.081 13.0 0.1 1.5 1 1 0 1 1 1 0 LidA long coiled-coil domain Ribosomal_S9 PF00380.19 ORF18953 - 6.6e-47 159.0 1.4 7.5e-47 158.8 1.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Flg_hook PF02120.16 ORF18953 - 0.13 12.1 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK DAP10 PF07213.11 ORF18275 - 0.097 12.6 0.4 0.46 10.5 0.1 2.0 2 0 0 2 2 2 0 DAP10 membrane protein Nuc_deoxyri_tr2 PF15891.5 ORF18206 - 0.045 14.1 2.8 0.071 13.4 2.8 1.2 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase like CENP-F_leu_zip PF10473.9 ORF17383 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF17383 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF17383 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF17383 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF17383 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF17383 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF17383 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF17383 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF17383 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF17383 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF17383 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF17383 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF17383 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF17383 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF17383 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF17383 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF17383 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF17383 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF17383 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF17383 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF17383 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF17383 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF17383 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF17383 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF17383 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF17383 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF17383 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF17383 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF17383 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF17383 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF17383 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF17383 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF17383 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF17383 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF17383 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF17383 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF17383 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF17383 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain Pkinase PF00069.25 ORF16035 - 5e-43 147.4 0.8 5.4e-43 147.3 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF16035 - 1.9e-22 79.8 0.1 2.2e-22 79.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF16035 - 1.3e-07 31.2 0.1 1.5e-07 31.0 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF16035 - 3.5e-05 23.9 0.0 4e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF16035 - 0.0018 17.1 0.0 0.002 16.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF16035 - 0.0025 17.4 0.0 0.003 17.2 0.0 1.1 1 0 0 1 1 1 1 RIO1 family Kinase-like PF14531.6 ORF16035 - 0.0029 17.0 0.0 0.0033 16.8 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Choline_kinase PF01633.20 ORF16035 - 0.0043 16.7 0.2 0.0056 16.3 0.2 1.3 1 1 0 1 1 1 1 Choline/ethanolamine kinase Haspin_kinase PF12330.8 ORF16035 - 0.0089 15.0 0.2 0.01 14.8 0.2 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pox_ser-thr_kin PF05445.11 ORF16035 - 0.013 14.5 0.0 0.016 14.2 0.0 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase YrbL-PhoP_reg PF10707.9 ORF16035 - 0.039 13.5 0.0 0.051 13.1 0.0 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Bac_DNA_binding PF00216.21 ORF16035 - 0.078 13.2 0.1 0.74 10.1 0.0 2.0 2 0 0 2 2 2 0 Bacterial DNA-binding protein FTA2 PF13095.6 ORF16035 - 0.11 12.1 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Sulfotransfer_3 PF13469.6 ORF15867 - 0.042 14.2 0.1 0.1 12.9 0.0 1.6 2 0 0 2 2 2 0 Sulfotransferase family Sulfotransfer_1 PF00685.27 ORF15867 - 0.044 13.3 0.0 0.06 12.8 0.0 1.3 1 1 0 1 1 1 0 Sulfotransferase domain AAA_27 PF13514.6 ORF15867 - 0.056 13.0 0.0 0.064 12.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain TAP42 PF04177.12 ORF15749 - 1.3e-13 50.7 9.0 1.4e-13 50.7 9.0 1.1 1 0 0 1 1 1 1 TAP42-like family Paf1 PF03985.13 ORF15749 - 0.046 12.7 7.4 0.053 12.5 7.4 1.0 1 0 0 1 1 1 0 Paf1 RR_TM4-6 PF06459.12 ORF15749 - 0.048 13.5 4.9 0.052 13.4 4.9 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Dicty_REP PF05086.12 ORF14341 - 9.2 4.1 10.9 11 3.9 10.9 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein ABC_tran PF00005.27 ORF13936 - 2.1e-08 34.8 0.0 3.8e-08 33.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF13936 - 7.4e-06 25.6 0.3 8.9e-06 25.3 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DDRGK PF09756.9 ORF13936 - 0.0081 15.8 0.4 0.011 15.4 0.4 1.2 1 0 0 1 1 1 1 DDRGK domain DUF3510 PF12022.8 ORF13908 - 0.038 14.4 1.3 0.047 14.1 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3510) CENP-F_leu_zip PF10473.9 ORF13209 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF13209 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF13209 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF13209 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF13209 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF13209 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF13209 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF13209 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF13209 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF13209 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF13209 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF13209 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF13209 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF13209 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF13209 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF13209 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF13209 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF13209 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF13209 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF13209 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF13209 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF13209 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF13209 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF13209 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF13209 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF13209 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF13209 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF13209 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF13209 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF13209 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF13209 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF13209 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF13209 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF13209 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF13209 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF13209 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF13209 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF13209 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain S1 PF00575.23 ORF13107 - 0.00077 19.8 1.3 0.59 10.5 0.2 2.4 2 1 0 2 2 2 2 S1 RNA binding domain WD40 PF00400.32 ORF12569 - 0.00015 22.5 2.6 0.00064 20.5 0.1 2.9 3 1 0 3 3 3 1 WD domain, G-beta repeat PPR_2 PF13041.6 ORF12129 - 0.027 14.6 0.1 0.98 9.7 0.1 2.2 1 1 1 2 2 2 0 PPR repeat family RSRP PF17069.5 ORF1173 - 0.11 12.0 2.6 0.17 11.4 2.6 1.2 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 HTH_1 PF00126.27 ORF111668 - 0.033 14.1 0.1 0.068 13.1 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family CENP-F_leu_zip PF10473.9 ORF111553 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF111553 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF111553 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF111553 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF111553 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF111553 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF111553 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF111553 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF111553 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF111553 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF111553 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF111553 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF111553 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF111553 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF111553 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF111553 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF111553 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF111553 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF111553 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF111553 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF111553 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF111553 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF111553 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF111553 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF111553 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF111553 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF111553 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF111553 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF111553 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF111553 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF111553 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF111553 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF111553 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF111553 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF111553 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF111553 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF111553 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF111553 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain Apolipoprotein PF01442.18 ORF111263 - 0.00039 20.3 0.0 0.00047 20.1 0.0 1.1 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF111263 - 0.00079 19.5 1.9 0.0013 18.8 1.9 1.3 1 1 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus Exonuc_VII_L PF02601.15 ORF111263 - 0.0016 18.1 1.5 0.0017 18.0 1.5 1.0 1 0 0 1 1 1 1 Exonuclease VII, large subunit NPV_P10 PF05531.12 ORF111263 - 0.0073 16.8 9.8 2.5 8.6 1.7 3.1 1 1 1 3 3 3 2 Nucleopolyhedrovirus P10 protein COG2 PF06148.11 ORF111263 - 0.0075 16.3 2.7 0.024 14.7 2.9 1.7 1 1 1 2 2 2 1 COG (conserved oligomeric Golgi) complex component, COG2 Dna2 PF08696.11 ORF111263 - 0.011 15.5 4.5 0.013 15.4 4.5 1.1 1 0 0 1 1 1 0 DNA replication factor Dna2 Prominin PF05478.11 ORF111263 - 0.024 12.6 3.5 0.027 12.5 3.5 1.0 1 0 0 1 1 1 0 Prominin KxDL PF10241.9 ORF111263 - 0.034 14.4 3.2 0.55 10.5 2.3 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein APG6_N PF17675.1 ORF111263 - 0.04 14.5 2.9 0.065 13.8 2.9 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF1664 PF07889.12 ORF111263 - 0.046 13.7 5.5 0.37 10.9 5.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Cortex-I_coil PF09304.10 ORF111263 - 0.052 13.8 2.8 6 7.1 2.8 2.7 1 1 0 1 1 1 0 Cortexillin I, coiled coil ACCA PF03255.14 ORF111263 - 0.06 13.2 3.0 0.092 12.6 3.0 1.5 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Methyltransf_14 PF08484.11 ORF111263 - 0.11 12.3 1.0 0.18 11.6 0.7 1.5 1 1 0 1 1 1 0 C-methyltransferase C-terminal domain CdvA PF18822.1 ORF111263 - 0.12 12.3 8.4 0.49 10.2 1.7 2.5 1 1 1 2 2 2 0 CdvA-like coiled-coil domain BCNT PF07572.12 ORF111263 - 0.12 12.5 5.5 0.55 10.3 0.1 2.8 2 1 1 3 3 3 0 Bucentaur or craniofacial development DUF1640 PF07798.11 ORF111263 - 0.12 12.4 7.0 0.24 11.4 7.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) CREPT PF16566.5 ORF111263 - 0.13 12.4 2.6 0.2 11.8 2.3 1.4 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour Syntaxin-6_N PF09177.11 ORF111263 - 0.15 12.7 6.1 0.37 11.4 6.1 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Laminin_II PF06009.12 ORF111263 - 0.17 11.9 6.9 0.97 9.4 6.5 1.9 1 1 1 2 2 2 0 Laminin Domain II RNase_HII PF01351.18 ORF111263 - 0.17 11.7 4.7 0.22 11.3 4.7 1.1 1 0 0 1 1 1 0 Ribonuclease HII DUF948 PF06103.11 ORF111263 - 0.18 12.1 4.3 1.2 9.5 4.3 2.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) TMPIT PF07851.13 ORF111263 - 0.19 11.0 4.4 0.26 10.5 4.4 1.4 1 0 0 1 1 1 0 TMPIT-like protein Phasin PF05597.11 ORF111263 - 0.21 11.6 3.5 0.8 9.7 3.5 2.0 1 1 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) ApoLp-III PF07464.11 ORF111263 - 0.24 11.5 9.0 0.4 10.8 9.0 1.4 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DUF1451 PF07295.11 ORF111263 - 0.25 11.4 2.7 0.28 11.2 2.7 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain YtxH PF12732.7 ORF111263 - 0.36 11.4 5.3 1.1 9.9 1.2 2.3 1 1 1 2 2 2 0 YtxH-like protein Synaptonemal_3 PF15191.6 ORF111263 - 1.2 9.0 5.8 1.1 9.1 0.5 2.5 1 1 1 2 2 2 0 Synaptonemal complex central element protein 3 DASH_Dam1 PF08653.10 ORF111263 - 2.8 7.8 4.4 11 5.9 0.3 3.2 3 2 0 3 3 3 0 DASH complex subunit Dam1 ADP_ribosyl_GH PF03747.14 ORF110871 - 2.7e-14 53.6 0.0 3.5e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Phage_Integr_2 PF13009.6 ORF110028 - 0.073 12.2 1.2 0.081 12.0 1.2 1.0 1 0 0 1 1 1 0 Putative phage integrase DUF1192 PF06698.11 ORF109265 - 0.042 13.9 0.0 0.055 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) zf-FPG_IleRS PF06827.14 ORF108818 - 0.3 11.0 3.7 3 7.8 0.4 2.5 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS DUF5472 PF17566.2 ORF108054 - 0.072 13.1 0.6 0.15 12.0 0.6 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5472) PTH2 PF01981.16 ORF10668 - 3.8e-09 36.8 0.6 8.2e-09 35.8 0.6 1.6 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 UBA PF00627.31 ORF10668 - 0.00011 22.0 4.6 0.00029 20.7 0.1 2.3 2 0 0 2 2 2 1 UBA/TS-N domain UBA_4 PF14555.6 ORF10668 - 0.0016 18.2 0.0 0.0033 17.2 0.0 1.6 1 0 0 1 1 1 1 UBA-like domain CUE PF02845.16 ORF10668 - 0.26 11.0 3.3 11 5.8 0.1 3.0 3 0 0 3 3 3 0 CUE domain PEX11 PF05648.14 ORF106487 - 7.8e-11 41.9 0.0 8.8e-11 41.7 0.0 1.0 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) CENP-F_leu_zip PF10473.9 ORF105802 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF105802 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF105802 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF105802 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF105802 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF105802 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF105802 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF105802 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF105802 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF105802 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF105802 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF105802 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF105802 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF105802 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF105802 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF105802 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF105802 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF105802 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF105802 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF105802 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF105802 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF105802 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF105802 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF105802 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF105802 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF105802 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF105802 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF105802 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF105802 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF105802 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF105802 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF105802 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF105802 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF105802 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF105802 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF105802 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF105802 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF105802 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain PilZ_2 PF16823.5 ORF105709 - 0.028 14.6 0.4 0.049 13.8 0.1 1.6 1 1 0 1 1 1 0 Atypical PilZ domain, cyclic di-GMP receptor Adeno_PV PF03910.13 ORF105709 - 0.054 12.2 4.8 0.061 12.0 4.8 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV FSA_C PF10479.9 ORF105709 - 3.1 5.8 5.3 3.3 5.7 5.3 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus S1 PF00575.23 ORF105326 - 6.5e-11 42.4 0.4 9e-11 42.0 0.4 1.2 1 0 0 1 1 1 1 S1 RNA binding domain Phage_base_V PF04717.12 ORF105326 - 0.042 13.8 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector Peptidase_M3_N PF08439.10 ORF105085 - 0.12 12.7 0.4 0.12 12.7 0.4 1.9 3 0 0 3 3 3 0 Oligopeptidase F NPV_P10 PF05531.12 ORF105085 - 0.15 12.5 3.3 4.1 7.9 0.3 2.3 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein BLOC1_2 PF10046.9 ORF105085 - 0.32 11.3 11.0 29 5.0 9.7 2.7 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DASH_Dam1 PF08653.10 ORF105085 - 0.76 9.6 3.4 1.4 8.8 0.7 2.3 2 0 0 2 2 2 0 DASH complex subunit Dam1 DUF1664 PF07889.12 ORF105085 - 1.1 9.4 8.2 0.33 11.0 3.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) CC2-LZ PF16516.5 ORF105085 - 2.2 8.7 10.7 2.1 8.8 4.1 2.2 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF724 PF05266.14 ORF105085 - 2.2 8.1 13.0 0.53 10.1 5.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Spc24 PF08286.11 ORF105085 - 4.2 7.7 12.5 2.4 8.4 4.0 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 APG6_N PF17675.1 ORF105085 - 4.2 7.9 11.8 9.8e+02 0.2 11.9 2.1 1 1 0 1 1 1 0 Apg6 coiled-coil region TSNR_N PF04705.12 ORF104994 - 0.072 13.2 1.0 0.13 12.4 1.0 1.5 1 1 0 1 1 1 0 Thiostrepton-resistance methylase, N terminus dCache_1 PF02743.18 ORF103467 - 0.022 14.6 0.1 0.026 14.3 0.1 1.1 1 0 0 1 1 1 0 Cache domain p25-alpha PF05517.12 ORF103467 - 0.19 11.9 1.5 0.92 9.7 1.5 1.9 1 1 0 1 1 1 0 p25-alpha ERbeta_N PF12497.8 ORF10302 - 3.1 7.6 10.6 2.6 7.9 1.2 2.6 1 1 2 3 3 3 0 Estrogen receptor beta CENP-F_leu_zip PF10473.9 ORF102871 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF102871 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF102871 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF102871 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF102871 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF102871 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF102871 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF102871 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF102871 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF102871 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF102871 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF102871 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF102871 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF102871 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF102871 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF102871 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF102871 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF102871 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF102871 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF102871 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF102871 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF102871 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF102871 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF102871 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF102871 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF102871 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF102871 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF102871 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF102871 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF102871 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF102871 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF102871 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF102871 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF102871 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF102871 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF102871 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF102871 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF102871 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain Phi-29_GP16_7 PF06720.11 ORF101672 - 0.021 14.7 0.1 0.032 14.0 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 CENP-F_leu_zip PF10473.9 ORF101244 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF101244 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF101244 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF101244 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF101244 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF101244 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF101244 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF101244 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF101244 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF101244 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF101244 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF101244 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF101244 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF101244 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF101244 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF101244 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF101244 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF101244 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF101244 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF101244 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF101244 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF101244 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF101244 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF101244 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF101244 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF101244 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF101244 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF101244 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF101244 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF101244 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF101244 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF101244 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF101244 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF101244 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF101244 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF101244 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF101244 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF101244 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain CENP-F_leu_zip PF10473.9 ORF100716 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF100716 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF100716 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF100716 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF100716 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF100716 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF100716 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF100716 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF100716 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF100716 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF100716 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF100716 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF100716 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF100716 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF100716 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF100716 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF100716 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF100716 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF100716 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF100716 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF100716 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF100716 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF100716 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF100716 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF100716 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF100716 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF100716 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF100716 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF100716 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF100716 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF100716 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF100716 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF100716 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF100716 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF100716 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF100716 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF100716 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF100716 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain Glyco_transf_18 PF15024.6 ORF100670 - 0.079 11.5 1.1 0.086 11.4 1.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Amb_V_allergen PF03913.13 ORF100670 - 0.12 12.4 1.1 0.12 12.4 1.1 3.1 4 0 0 4 4 4 0 Amb V Allergen DUF1145 PF06611.12 ORF100370 - 7.6e-27 93.0 7.8 1.2e-26 92.4 7.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1145) DUF2678 PF10856.8 ORF100370 - 0.019 14.9 0.2 0.025 14.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) NDUF_B5 PF09781.9 NODE_48846_length_385_cov_1.548571_g40965_i0forward_frame_1 - 0.13 11.8 4.8 0.2 11.2 4.8 1.3 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit Neur_chan_memb PF02932.16 NODE_48843_length_385_cov_1.794286_g40962_i0reverse_frame_1 - 0.028 14.5 0.4 0.031 14.3 0.4 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4974 PF16344.5 NODE_48843_length_385_cov_1.794286_g40962_i0reverse_frame_1 - 0.045 13.7 0.3 5 7.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4974) DUF4694 PF15765.5 NODE_48843_length_385_cov_1.794286_g40962_i0reverse_frame_1 - 0.077 13.0 0.0 0.087 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) PH_17 PF18012.1 NODE_48837_length_385_cov_2.040000_g40956_i0forward_frame_1 - 0.048 13.4 0.1 0.11 12.2 0.0 1.7 1 1 1 2 2 2 0 PH domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks177.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks177.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks177.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks177.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3217 PF11506.8 NODE_48824_length_385_cov_2.802857_g40943_i0reverse_frame_1 - 0.024 14.6 0.2 0.041 13.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3217) COX4 PF02936.14 NODE_48819_length_385_cov_4.202857_g40938_i0forward_frame_1 - 0.34 10.9 0.5 0.52 10.3 0.5 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV NIF PF03031.18 NODE_48814_length_385_cov_22.862857_g40933_i0reverse_frame_1 - 4.6e-20 72.0 0.1 6.1e-20 71.6 0.1 1.2 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Popeye PF04831.13 NODE_48813_length_385_cov_41.037143_g40932_i0reverse_frame_1 - 0.087 13.0 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Popeye protein conserved region Ras PF00071.22 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_1 - 1.1e-07 31.5 0.1 1.8e-07 30.9 0.0 1.3 1 1 0 1 1 1 1 Ras family Roc PF08477.13 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_1 - 3e-07 30.7 0.1 5.1e-07 29.9 0.1 1.5 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_1 - 9.2e-05 22.0 0.0 0.00012 21.6 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Membralin PF09746.9 NODE_48799_length_385_cov_98.305714_g40918_i0reverse_frame_1 - 9.1 5.2 8.8 11 5.0 8.8 1.0 1 0 0 1 1 1 0 Tumour-associated protein Cytochrome_CBB3 PF13442.6 NODE_48791_length_385_cov_9360.302857_g40911_i0forward_frame_1 - 1.4e-13 50.9 0.0 2.4e-13 50.2 0.0 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 NODE_48791_length_385_cov_9360.302857_g40911_i0forward_frame_1 - 1.8e-05 25.8 0.5 0.00029 21.9 0.5 2.3 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 NODE_48791_length_385_cov_9360.302857_g40911_i0forward_frame_1 - 0.0063 16.2 0.6 0.035 13.8 0.4 2.0 1 1 1 2 2 2 1 Cytochrome c-550 domain DUF2675 PF11247.8 NODE_48791_length_385_cov_9360.302857_g40911_i0forward_frame_1 - 0.1 12.7 0.2 17 5.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2675) Tristanin_u2 PF16638.5 NODE_48788_length_386_cov_1.156695_g40908_i0reverse_frame_1 - 0.2 12.5 0.3 0.2 12.5 0.3 2.1 3 0 0 3 3 3 0 Unstructured region on methyltransferase between zinc-fingers KTI12 PF08433.10 NODE_48780_length_386_cov_1.797721_g40900_i0reverse_frame_1 - 0.028 13.9 0.7 0.033 13.7 0.7 1.1 1 0 0 1 1 1 0 Chromatin associated protein KTI12 BST2 PF16716.5 NODE_48780_length_386_cov_1.797721_g40900_i0reverse_frame_1 - 0.041 14.5 1.3 0.041 14.5 1.3 1.9 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 Importin_rep_6 PF18829.1 NODE_48780_length_386_cov_1.797721_g40900_i0reverse_frame_1 - 0.054 13.6 0.4 0.054 13.6 0.4 1.5 2 0 0 2 2 2 0 Importin repeat 6 DNA_methylase PF00145.17 NODE_48758_length_386_cov_4.037037_g40878_i0reverse_frame_1 - 0.024 14.0 0.0 0.027 13.8 0.0 1.1 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase DEC-1_N PF04625.13 NODE_48758_length_386_cov_4.037037_g40878_i0reverse_frame_1 - 0.029 13.4 4.0 0.033 13.2 4.0 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DUF3597 PF12200.8 NODE_48758_length_386_cov_4.037037_g40878_i0reverse_frame_1 - 0.095 13.2 0.5 0.11 13.0 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3597) DNA_pol_viral_N PF00242.17 NODE_48742_length_386_cov_80.205128_g40862_i0reverse_frame_1 - 0.69 9.3 5.8 0.82 9.1 5.8 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) N-terminal domain HXXEE PF13787.6 NODE_48736_length_386_cov_93.752137_g40856_i0reverse_frame_1 - 0.048 14.5 2.9 1 10.2 2.9 2.1 1 1 0 1 1 1 0 Protein of unknown function with HXXEE motif FGFR3_TM PF18123.1 NODE_48736_length_386_cov_93.752137_g40856_i0reverse_frame_1 - 0.053 13.1 6.7 0.72 9.4 0.9 2.4 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain TRAPPC10 PF12584.8 NODE_48730_length_386_cov_146.658120_g40850_i0forward_frame_1 - 0.14 11.8 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Trafficking protein particle complex subunit 10, TRAPPC10 Lar_restr_allev PF14354.6 NODE_48728_length_386_cov_160.729345_g40848_i0forward_frame_1 - 0.015 15.7 1.9 0.035 14.5 1.9 1.6 1 0 0 1 1 1 0 Restriction alleviation protein Lar UPF0146 PF03686.13 NODE_48728_length_386_cov_160.729345_g40848_i0forward_frame_1 - 0.037 13.9 0.0 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0146) Anti-TRAP PF15777.5 NODE_48728_length_386_cov_160.729345_g40848_i0forward_frame_1 - 0.041 13.8 0.4 0.075 13.0 0.4 1.4 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein Zn-ribbon_8 PF09723.10 NODE_48728_length_386_cov_160.729345_g40848_i0forward_frame_1 - 0.095 12.8 1.6 2 8.6 0.2 2.4 2 0 0 2 2 2 0 Zinc ribbon domain Sulfatase PF00884.23 NODE_48711_length_387_cov_1.946023_g40832_i0reverse_frame_1 - 4.6e-12 46.0 0.0 5.3e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 Sulfatase Herpes_LMP1 PF05297.11 NODE_48703_length_387_cov_2.519886_g40824_i0reverse_frame_1 - 0.37 9.9 0.7 0.47 9.6 0.7 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) RR_TM4-6 PF06459.12 NODE_48692_length_387_cov_3.426136_g40813_i0reverse_frame_1 - 0.14 11.9 0.7 0.17 11.7 0.7 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF21 PF01595.20 NODE_48692_length_387_cov_3.426136_g40813_i0forward_frame_1 - 0.38 10.4 5.0 0.73 9.5 4.1 1.9 2 0 0 2 2 2 0 Cyclin M transmembrane N-terminal domain Myb_CC_LHEQLE PF14379.6 NODE_48683_length_387_cov_12.886364_g40804_i0reverse_frame_1 - 0.03 14.0 0.8 5.8 6.7 0.0 3.2 4 0 0 4 4 4 0 MYB-CC type transfactor, LHEQLE motif DUF3159 PF11361.8 NODE_48683_length_387_cov_12.886364_g40804_i0forward_frame_1 - 0.052 13.3 1.1 0.069 12.9 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3159) SUR7 PF06687.12 NODE_48683_length_387_cov_12.886364_g40804_i0forward_frame_1 - 2.6 7.6 18.1 1.7 8.2 17.0 1.3 1 1 0 1 1 1 0 SUR7/PalI family DUF3385 PF11865.8 NODE_48680_length_387_cov_23.943182_g40801_i0forward_frame_1 - 0.064 13.2 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) MWFE PF15879.5 NODE_48671_length_387_cov_67.343750_g40792_i0forward_frame_1 - 0.13 12.5 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit Peptidase_S49_N PF08496.10 NODE_48671_length_387_cov_67.343750_g40792_i0forward_frame_1 - 2.4 8.2 9.9 33 4.5 9.9 2.0 1 1 0 1 1 1 0 Peptidase family S49 N-terminal Presenilin PF01080.17 NODE_48671_length_387_cov_67.343750_g40792_i0forward_frame_1 - 4 6.1 4.4 4.5 5.9 4.4 1.2 1 0 0 1 1 1 0 Presenilin TPR_22 PF18833.1 NODE_48662_length_387_cov_79.684659_g40785_i0forward_frame_1 - 0.037 14.2 1.2 0.07 13.3 0.6 1.7 1 1 0 1 1 1 0 Tetratricopeptide repeat DUF4431 PF14485.6 NODE_48656_length_387_cov_91.511364_g40779_i0reverse_frame_1 - 0.22 11.3 0.0 0.39 10.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4431) CBM_48 PF02922.18 NODE_48650_length_387_cov_159.181818_g40773_i0reverse_frame_1 - 2.9e-05 24.3 0.1 5.7e-05 23.4 0.1 1.6 1 1 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMPK1_CBM PF16561.5 NODE_48650_length_387_cov_159.181818_g40773_i0reverse_frame_1 - 0.0012 19.0 0.1 0.0025 18.0 0.1 1.5 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase Ribosomal_S22 PF08136.11 NODE_48645_length_387_cov_321.119318_g40768_i0forward_frame_1 - 0.0094 16.3 0.1 0.017 15.5 0.1 1.4 1 0 0 1 1 1 1 30S ribosomal protein subunit S22 family PHD_2 PF13831.6 NODE_48644_length_387_cov_371.545455_g40767_i0reverse_frame_1 - 0.41 10.3 4.8 1.4 8.5 0.2 2.2 2 0 0 2 2 2 0 PHD-finger Thiolase_C PF02803.18 NODE_48639_length_387_cov_3715.062500_g40762_i0forward_frame_1 - 0.17 11.6 1.0 0.25 11.0 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain Thiolase_C PF02803.18 NODE_48638_length_387_cov_3715.096591_g40761_i0forward_frame_1 - 0.17 11.5 1.0 0.25 11.0 1.0 1.2 1 0 0 1 1 1 0 Thiolase, C-terminal domain DUF1270 PF06900.11 NODE_48634_length_388_cov_1.430595_g40757_i0reverse_frame_3 - 0.035 14.5 0.1 0.083 13.3 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1270) Peptidase_C2 PF00648.21 NODE_48632_length_388_cov_1.696884_g40755_i0reverse_frame_2 - 1.1e-10 41.0 0.1 2.5e-10 39.9 0.1 1.5 1 1 0 1 1 1 1 Calpain family cysteine protease DHR-2 PF06920.13 NODE_48632_length_388_cov_1.696884_g40755_i0reverse_frame_2 - 0.017 13.8 0.2 0.017 13.8 0.2 1.0 1 0 0 1 1 1 0 Dock homology region 2 TPR_18 PF13512.6 NODE_48632_length_388_cov_1.696884_g40755_i0reverse_frame_2 - 0.11 12.6 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat Ribosomal_S7 PF00177.21 NODE_48630_length_388_cov_1.841360_g40753_i0forward_frame_2 - 6.8e-05 22.6 0.3 9.5e-05 22.1 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e DUF3682 PF12446.8 NODE_48629_length_388_cov_1.875354_g40752_i0forward_frame_3 - 2.4 8.6 4.8 3.5 8.1 4.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3682) Use1 PF09753.9 NODE_48625_length_388_cov_2.212465_g40748_i0reverse_frame_2 - 0.076 12.7 1.3 0.087 12.5 1.3 1.1 1 0 0 1 1 1 0 Membrane fusion protein Use1 Spike_rec_bind PF09408.10 NODE_48623_length_388_cov_2.351275_g40746_i0reverse_frame_3 - 0.04 13.6 1.0 0.046 13.4 1.0 1.0 1 0 0 1 1 1 0 Spike receptor binding domain Baculo_11_kDa PF06143.11 NODE_48621_length_388_cov_2.504249_g40744_i0reverse_frame_3 - 0.014 15.0 0.3 0.019 14.6 0.3 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family V_ATPase_I PF01496.19 NODE_48621_length_388_cov_2.504249_g40744_i0forward_frame_2 - 1.8e-44 151.9 5.3 2e-44 151.8 5.3 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF1890 PF09001.11 NODE_48613_length_388_cov_3.254958_g40736_i0reverse_frame_2 - 0.071 13.5 0.1 0.091 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1890) DCA16 PF15349.6 NODE_48612_length_388_cov_3.441926_g40735_i0reverse_frame_3 - 0.049 13.2 0.1 0.059 12.9 0.1 1.1 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 GDPD PF03009.17 NODE_48611_length_388_cov_3.461756_g40734_i0reverse_frame_2 - 4.4e-17 62.7 0.0 4.8e-17 62.5 0.0 1.0 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family DUF535 PF04393.13 NODE_48610_length_388_cov_3.606232_g40733_i0reverse_frame_2 - 4.1e-18 65.6 1.0 4.9e-18 65.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF535) Adenylate_cycl PF01295.18 NODE_48608_length_388_cov_3.878187_g40731_i0forward_frame_3 - 9.6e-38 130.2 1.0 1.1e-37 130.0 1.0 1.1 1 0 0 1 1 1 1 Adenylate cyclase, class-I Adenyl_cycl_N PF12633.7 NODE_48608_length_388_cov_3.878187_g40731_i0forward_frame_3 - 3.5e-11 43.4 0.1 4.6e-11 43.0 0.1 1.2 1 0 0 1 1 1 1 Adenylate cyclase NT domain DUF3340 PF11818.8 NODE_48604_length_388_cov_4.742210_g40727_i0forward_frame_2 - 0.022 14.9 0.5 0.028 14.6 0.5 1.1 1 0 0 1 1 1 0 C-terminal domain of tail specific protease (DUF3340) DUF3481 PF11980.8 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_3 - 0.15 11.8 0.6 0.23 11.2 0.6 1.3 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein CX PF01705.19 NODE_48600_length_388_cov_19.059490_g40723_i0reverse_frame_3 - 0.73 10.4 3.8 7.9 7.1 0.0 2.8 2 1 1 3 3 3 0 CX module Ph1570 PF09638.10 NODE_48588_length_388_cov_65.770538_g40711_i0reverse_frame_3 - 0.044 13.6 0.0 0.065 13.1 0.0 1.3 1 0 0 1 1 1 0 Ph1570 protein SWIB PF02201.18 NODE_48587_length_388_cov_66.274788_g40710_i0forward_frame_2 - 7.2e-26 89.9 0.1 9.7e-26 89.5 0.1 1.2 1 0 0 1 1 1 1 SWIB/MDM2 domain Hum_adeno_E3A PF05393.11 NODE_48584_length_388_cov_73.087819_g40707_i0reverse_frame_2 - 5.9 6.9 8.3 0.61 10.1 0.6 2.1 2 0 0 2 2 2 0 Human adenovirus early E3A glycoprotein DUF3487 PF11990.8 NODE_48578_length_388_cov_86.781870_g40701_i0reverse_frame_2 - 4.7 7.1 11.0 0.56 10.1 4.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3487) Enterotoxin_HS1 PF08090.11 NODE_48577_length_388_cov_87.277620_g40700_i0reverse_frame_3 - 2 8.4 5.5 0.74 9.8 2.6 1.8 2 0 0 2 2 2 0 Heat stable E.coli enterotoxin 1 T6SS_VasJ PF16989.5 NODE_48575_length_388_cov_88.152975_g40698_i0reverse_frame_3 - 0.012 15.0 1.0 0.016 14.7 1.0 1.2 1 0 0 1 1 1 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 14-3-3 PF00244.20 NODE_48568_length_388_cov_102.841360_g40691_i0reverse_frame_2 - 4.2e-06 26.4 0.0 5.7e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 14-3-3 protein DASH_Ask1 PF08655.10 NODE_48567_length_388_cov_112.396601_g40690_i0reverse_frame_2 - 0.12 12.3 0.0 0.28 11.1 0.0 1.7 1 0 0 1 1 1 0 DASH complex subunit Ask1 DUF3234 PF11572.8 NODE_48566_length_388_cov_113.699717_g40689_i0reverse_frame_3 - 0.098 12.8 0.0 6.9 6.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3234) DUF3431 PF11913.8 NODE_48566_length_388_cov_113.699717_g40689_i0forward_frame_3 - 1.3e-09 38.2 0.0 1.7e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3431) SseB_C PF14581.6 NODE_48566_length_388_cov_113.699717_g40689_i0forward_frame_3 - 0.14 12.3 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 SseB protein C-terminal domain DUF2457 PF10446.9 NODE_48565_length_388_cov_115.762040_g40688_i0reverse_frame_3 - 0.0017 17.6 0.8 0.0024 17.1 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2457) PH_10 PF15411.6 NODE_48563_length_388_cov_124.892351_g40686_i0reverse_frame_2 - 0.14 12.5 0.2 0.19 12.0 0.2 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain DDRGK PF09756.9 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 3.1e-38 131.2 0.1 3.7e-38 131.0 0.1 1.1 1 0 0 1 1 1 1 DDRGK domain FeoC PF09012.10 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 1.6e-05 24.9 0.4 0.00051 20.1 0.1 2.1 2 0 0 2 2 2 1 FeoC like transcriptional regulator HTH_DeoR PF08220.12 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.03 14.1 0.0 0.22 11.3 0.1 2.0 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain DUF469 PF04320.14 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.04 14.8 0.2 3.5 8.5 0.2 2.1 1 1 0 1 1 1 0 Protein with unknown function (DUF469) Lipoprotein_1 PF00820.19 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.077 12.0 0.0 0.089 11.8 0.0 1.1 1 0 0 1 1 1 0 Borrelia lipoprotein HTH_11 PF08279.12 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.081 12.9 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 HTH domain DUF4128 PF13554.6 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.083 12.9 0.0 0.3 11.2 0.0 1.8 2 0 0 2 2 2 0 Bacteriophage related domain of unknown function ANAPC8 PF04049.13 NODE_48554_length_388_cov_403.048159_g36523_i2reverse_frame_3 - 0.0055 16.8 0.4 0.0073 16.4 0.4 1.1 1 0 0 1 1 1 1 Anaphase promoting complex subunit 8 / Cdc23 DUF1071 PF06378.11 NODE_48548_length_388_cov_3704.560907_g40672_i0forward_frame_3 - 0.13 11.8 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) Abhydrolase_4 PF08386.10 NODE_48547_length_388_cov_10444.147309_g40671_i0reverse_frame_2 - 0.064 13.4 0.3 0.11 12.6 0.2 1.6 1 1 1 2 2 2 0 TAP-like protein DUF809 PF05663.11 NODE_48546_length_388_cov_54547.195467_g40670_i0forward_frame_2 - 1.5 8.9 3.7 0.45 10.7 0.1 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF809) Ecm29 PF13001.7 NODE_48544_length_389_cov_1.384181_g40668_i0forward_frame_2 - 0.085 11.5 0.4 0.11 11.2 0.4 1.1 1 0 0 1 1 1 0 Proteasome stabiliser DUF3512 PF12024.8 NODE_48540_length_389_cov_1.929379_g40664_i0reverse_frame_2 - 0.0056 16.2 0.3 0.0067 15.9 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3512) Ycf70 PF17382.2 NODE_48540_length_389_cov_1.929379_g40664_i0forward_frame_3 - 0.17 12.3 0.3 0.24 11.8 0.3 1.4 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Endonuc_Holl PF10107.9 NODE_48538_length_389_cov_1.994350_g40662_i0reverse_frame_2 - 0.032 14.1 0.4 0.039 13.8 0.4 1.1 1 0 0 1 1 1 0 Endonuclease related to archaeal Holliday junction resolvase Sec62 PF03839.16 NODE_48538_length_389_cov_1.994350_g40662_i0forward_frame_3 - 0.057 12.9 2.9 0.065 12.7 2.9 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 TPR_19 PF14559.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 3.2e-09 37.2 1.2 0.00043 20.7 0.3 2.5 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 5.7e-07 29.5 2.5 0.0012 19.0 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 7.6e-06 25.7 3.4 0.094 12.9 0.2 3.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 9.2e-06 25.9 2.5 0.0086 16.3 0.2 2.8 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 1e-05 25.1 3.9 0.0069 16.2 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 1.3e-05 24.9 0.3 0.42 10.6 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 1.7e-05 25.4 0.1 0.00023 21.8 0.0 2.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 2.3e-05 24.2 2.5 0.063 13.5 0.4 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 0.00098 19.0 0.5 0.48 10.6 0.1 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 0.0021 18.7 0.4 0.25 12.3 0.1 2.7 2 1 1 3 3 3 1 Tetratricopeptide repeat ERAP1_C PF11838.8 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 0.039 13.5 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 ERAP1-like C-terminal domain TPR_11 PF13414.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 0.097 12.4 8.8 7.1 6.4 0.1 3.9 2 1 2 4 4 4 0 TPR repeat TPR_6 PF13174.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 2.5 8.9 5.8 4.6 8.1 0.2 3.0 4 0 0 4 4 3 0 Tetratricopeptide repeat DUF370 PF04025.12 NODE_48536_length_389_cov_2.050847_g40660_i0forward_frame_3 - 0.039 14.1 0.0 0.056 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF370) Shisa PF13908.6 NODE_48532_length_389_cov_2.415254_g40656_i0reverse_frame_2 - 5.1 7.3 6.5 0.17 12.1 0.9 1.4 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator TMCCDC2 PF15844.5 NODE_48523_length_389_cov_4.011299_g40647_i0reverse_frame_2 - 0.23 11.4 2.0 0.34 10.8 2.0 1.3 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 Zn_clus PF00172.18 NODE_48522_length_389_cov_4.155367_g40646_i0reverse_frame_2 - 0.082 13.0 0.6 0.15 12.2 0.6 1.4 1 0 0 1 1 1 0 Fungal Zn(2)-Cys(6) binuclear cluster domain Pkinase PF00069.25 NODE_48522_length_389_cov_4.155367_g40646_i0forward_frame_2 - 1.6e-09 37.5 0.0 2.5e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_48522_length_389_cov_4.155367_g40646_i0forward_frame_2 - 1.1e-07 31.4 0.0 1.4e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase NUT PF12881.7 NODE_48518_length_389_cov_41.494350_g40642_i0forward_frame_3 - 4.1 5.7 8.6 5 5.4 8.6 1.0 1 0 0 1 1 1 0 NUT protein Presenilin PF01080.17 NODE_48518_length_389_cov_41.494350_g40642_i0forward_frame_3 - 4.5 5.9 10.5 5.1 5.8 10.5 1.1 1 0 0 1 1 1 0 Presenilin TrmO PF01980.16 NODE_48515_length_389_cov_69.183616_g40639_i0reverse_frame_2 - 0.074 13.3 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 tRNA-methyltransferase O TPP_enzyme_N PF02776.18 NODE_48515_length_389_cov_69.183616_g40639_i0forward_frame_3 - 0.086 12.5 0.1 0.098 12.3 0.1 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SH3_11 PF18103.1 NODE_48512_length_389_cov_72.980226_g40636_i0reverse_frame_3 - 0.092 12.9 0.2 0.15 12.3 0.2 1.3 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain zf-rbx1 PF12678.7 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 2e-05 24.8 3.0 3.6e-05 23.9 3.0 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.00042 20.6 2.5 0.00078 19.7 2.5 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.00044 20.0 1.4 0.00081 19.2 1.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.0036 17.3 0.4 0.0059 16.6 0.4 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.05 13.5 2.1 0.11 12.3 2.1 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.069 13.3 1.0 0.13 12.4 1.0 1.4 1 0 0 1 1 1 0 RING-variant domain ETRAMP PF09716.10 NODE_48503_length_389_cov_92.841808_g40627_i0reverse_frame_2 - 0.14 12.2 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Sugar_tr PF00083.24 NODE_48500_length_389_cov_101.036723_g40624_i0reverse_frame_3 - 1.2e-07 31.0 5.4 1.6e-07 30.6 5.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_48500_length_389_cov_101.036723_g40624_i0reverse_frame_3 - 1.1e-05 24.6 4.1 1.3e-05 24.3 4.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Plasmo_rep PF12135.8 NODE_48499_length_389_cov_104.858757_g40623_i0reverse_frame_2 - 0.24 11.0 2.2 0.39 10.3 2.2 1.3 1 0 0 1 1 1 0 Plasmodium repeat family Ferlin_C PF16165.5 NODE_48499_length_389_cov_104.858757_g40623_i0forward_frame_2 - 1.2 9.1 4.0 1.7 8.6 4.0 1.2 1 0 0 1 1 1 0 Ferlin C-terminus Phtf-FEM1B_bdg PF12129.8 NODE_48499_length_389_cov_104.858757_g40623_i0forward_frame_2 - 5.7 6.8 6.5 1.8 8.4 0.2 2.0 1 1 1 2 2 2 0 Male germ-cell putative homeodomain transcription factor Serinc PF03348.15 NODE_48495_length_389_cov_134.200565_g40619_i0reverse_frame_2 - 5.7e-15 55.2 0.0 6.6e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Serine incorporator (Serinc) DUF423 PF04241.15 NODE_48495_length_389_cov_134.200565_g40619_i0reverse_frame_2 - 0.05 13.8 0.0 0.066 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF423) DUF3303 PF11746.8 NODE_48495_length_389_cov_134.200565_g40619_i0forward_frame_2 - 0.05 13.9 0.1 0.069 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3303) DUF1659 PF07872.11 NODE_48494_length_389_cov_135.644068_g40618_i0forward_frame_2 - 0.38 10.4 2.9 4.6 7.0 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1659) zf-RING_UBOX PF13445.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 8e-10 38.6 5.2 4.1e-09 36.3 5.2 2.2 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 8.5e-08 32.0 7.7 5e-07 29.6 6.7 2.4 1 1 1 2 2 2 1 zinc-RING finger domain zf-RING_2 PF13639.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 9.2e-08 32.3 7.0 9.2e-08 32.3 7.0 1.9 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 2.2e-07 30.6 5.3 2.6e-07 30.4 3.4 2.1 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 9.2e-07 28.6 3.5 9.2e-07 28.6 3.5 2.4 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 2.9e-05 23.7 1.5 5.4e-05 22.8 0.5 2.0 1 1 1 2 2 2 1 RING-like zinc finger zf-C3HC4_4 PF15227.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 3.4e-05 23.9 9.8 0.00042 20.4 8.4 3.0 2 1 1 3 3 3 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 0.0022 17.8 7.1 0.0022 17.8 7.1 2.1 3 0 0 3 3 3 1 RING/Ubox like zinc-binding domain Prok-RING_4 PF14447.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 0.006 16.4 9.1 0.31 11.0 9.4 2.7 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 0.97 9.7 8.5 0.31 11.2 4.2 2.2 2 1 0 2 2 2 0 FANCL C-terminal domain zf-rbx1 PF12678.7 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 1.6 9.0 8.3 0.51 10.7 3.5 2.4 2 1 0 2 2 2 0 RING-H2 zinc finger domain Corona_nucleoca PF00937.18 NODE_48484_length_389_cov_260.584746_g40608_i0forward_frame_2 - 0.071 12.1 0.0 0.088 11.8 0.0 1.2 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Peptidase_M20 PF01546.28 NODE_48474_length_390_cov_1.828169_g40598_i0reverse_frame_2 - 0.015 15.0 0.1 0.016 14.9 0.1 1.1 1 0 0 1 1 1 0 Peptidase family M20/M25/M40 M20_dimer PF07687.14 NODE_48474_length_390_cov_1.828169_g40598_i0reverse_frame_2 - 0.024 14.6 0.0 0.036 14.0 0.0 1.3 1 0 0 1 1 1 0 Peptidase dimerisation domain DUF3810 PF12725.7 NODE_48473_length_390_cov_1.836620_g40597_i0reverse_frame_3 - 0.041 13.2 1.1 0.048 13.0 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) SPT_ssu-like PF11779.8 NODE_48473_length_390_cov_1.836620_g40597_i0reverse_frame_3 - 1.6 8.4 4.8 2.3 7.9 0.3 2.3 2 0 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like Kinesin PF00225.23 NODE_48473_length_390_cov_1.836620_g40597_i0forward_frame_3 - 3.8e-34 118.1 0.1 4.8e-34 117.8 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain Kinesin_assoc PF16183.5 NODE_48473_length_390_cov_1.836620_g40597_i0forward_frame_3 - 0.00032 20.9 1.5 0.00066 19.9 0.6 1.8 2 0 0 2 2 2 1 Kinesin-associated AstA PF04958.12 NODE_48472_length_390_cov_1.909859_g40596_i0forward_frame_2 - 8.6e-39 133.0 0.0 9.6e-39 132.9 0.0 1.0 1 0 0 1 1 1 1 Arginine N-succinyltransferase beta subunit DUF3587 PF12132.8 NODE_48471_length_390_cov_1.980282_g40595_i0reverse_frame_3 - 2.4 7.5 10.1 3.6 7.0 10.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3587) DUF2997 PF11211.8 NODE_48471_length_390_cov_1.980282_g40595_i0forward_frame_2 - 0.14 11.9 0.1 0.52 10.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2997) Pyr_redox_2 PF07992.14 NODE_48467_length_390_cov_2.346479_g40591_i0reverse_frame_3 - 2.3e-16 59.9 0.0 2.7e-16 59.7 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DUF5345 PF17280.2 NODE_48465_length_390_cov_2.419718_g40589_i0forward_frame_2 - 0.015 15.3 0.0 0.027 14.5 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5345) ASFV_J13L PF05568.11 NODE_48460_length_390_cov_2.740845_g40584_i0forward_frame_2 - 0.15 11.8 2.4 0.21 11.3 2.4 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Abhydrolase_9_N PF15420.6 NODE_48459_length_390_cov_2.842254_g40583_i0forward_frame_3 - 0.029 14.4 1.1 0.032 14.2 1.1 1.1 1 0 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus Peptidase_S11 PF00768.20 NODE_48457_length_390_cov_2.954930_g40581_i0forward_frame_2 - 1.1e-36 126.5 0.1 1.3e-36 126.3 0.1 1.0 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase p450 PF00067.22 NODE_48456_length_390_cov_2.977465_g40580_i0forward_frame_2 - 4.1e-27 95.1 0.2 4.5e-27 94.9 0.2 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF5432 PF17497.2 NODE_48454_length_390_cov_3.461972_g40578_i0reverse_frame_3 - 0.043 13.9 3.0 0.072 13.2 3.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5432) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks178.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks178.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks178.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks178.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Adeno_E4_34 PF04528.13 NODE_48434_length_390_cov_81.154930_g40558_i0forward_frame_2 - 0.017 15.0 0.3 0.023 14.5 0.3 1.2 1 0 0 1 1 1 0 Adenovirus early E4 34 kDa protein conserved region DUF2628 PF10947.8 NODE_48434_length_390_cov_81.154930_g40558_i0forward_frame_2 - 4 7.9 9.3 5.6 7.4 9.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Myb_DNA-bind_6 PF13921.6 NODE_48431_length_390_cov_84.718310_g40555_i0reverse_frame_2 - 0.00065 19.9 0.6 0.00092 19.4 0.6 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain MADF_DNA_bdg PF10545.9 NODE_48431_length_390_cov_84.718310_g40555_i0reverse_frame_2 - 0.016 15.6 0.5 0.02 15.2 0.5 1.4 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like Myb_DNA-binding PF00249.31 NODE_48431_length_390_cov_84.718310_g40555_i0reverse_frame_2 - 0.11 12.8 1.4 0.22 11.8 1.4 1.6 1 1 0 1 1 1 0 Myb-like DNA-binding domain zf-RING_2 PF13639.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1e-10 41.7 2.3 1.6e-10 41.2 2.3 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 2.9e-08 33.4 1.9 5.2e-08 32.6 1.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 2.6e-07 30.4 1.2 4.1e-07 29.8 1.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 3.5e-07 30.4 4.5 1.2e-06 28.7 4.5 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 8e-07 28.8 2.2 1.7e-06 27.7 2.2 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1e-06 28.3 5.3 2e-06 27.5 5.3 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1.2e-06 28.4 3.1 2.1e-06 27.7 3.1 1.4 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1.5e-06 27.9 1.2 4.8e-06 26.3 1.1 1.8 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1.2e-05 25.2 2.5 4e-05 23.5 2.1 1.9 1 1 1 2 2 2 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.0013 18.3 3.2 0.0024 17.5 3.2 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.0015 18.5 1.1 0.0038 17.2 0.9 1.7 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Adeno_terminal PF02459.15 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.016 13.6 0.0 0.017 13.6 0.0 1.2 1 0 0 1 1 1 0 Adenoviral DNA terminal protein zf-Nse PF11789.8 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.041 13.7 0.9 0.13 12.1 0.9 1.8 1 1 1 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.057 13.6 2.1 0.22 11.7 2.1 2.0 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING RINGv PF12906.7 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.16 12.1 3.9 0.45 10.7 3.0 2.0 1 1 1 2 2 2 0 RING-variant domain PHD_4 PF16866.5 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.2 11.8 3.9 1.9 8.7 3.9 2.2 1 1 0 1 1 1 0 PHD-finger PAP_fibrillin PF04755.12 NODE_48424_length_390_cov_104.563380_g40548_i0reverse_frame_2 - 1.8e-05 24.8 0.0 4.4e-05 23.5 0.0 1.5 1 1 0 1 1 1 1 PAP_fibrillin Rrn6 PF10214.9 NODE_48422_length_390_cov_118.698592_g40546_i0reverse_frame_3 - 3.6 6.0 6.9 4 5.8 6.9 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Ndc1_Nup PF09531.10 NODE_48418_length_390_cov_135.307042_g40542_i0reverse_frame_3 - 8.6 4.9 8.9 9 4.8 8.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PhetRS_B1 PF18262.1 NODE_48418_length_390_cov_135.307042_g40542_i0forward_frame_2 - 0.052 13.8 0.1 9.4 6.5 0.0 2.3 2 0 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain BCCT PF02028.17 NODE_48417_length_390_cov_144.112676_g40541_i0reverse_frame_3 - 2.6e-20 72.3 0.3 2.9e-20 72.2 0.3 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DUF3774 PF12609.8 NODE_48409_length_390_cov_339.138028_g40533_i0reverse_frame_3 - 0.58 11.2 5.3 1.3 10.1 5.3 1.7 1 1 0 1 1 1 0 Wound-induced protein GyrI-like PF06445.15 NODE_48409_length_390_cov_339.138028_g40533_i0reverse_frame_2 - 0.12 12.7 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 GyrI-like small molecule binding domain PP2C PF00481.21 ORF99605 - 8.6e-11 42.0 0.0 9.6e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C GGACT PF06094.12 ORF9762 - 0.032 14.8 0.0 0.036 14.7 0.0 1.2 1 0 0 1 1 1 0 Gamma-glutamyl cyclotransferase, AIG2-like MtrD PF04207.12 ORF9762 - 0.072 12.8 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit D HHH_7 PF14635.6 ORF97556 - 0.035 14.4 1.4 0.5 10.7 0.1 2.1 1 1 1 2 2 2 0 Helix-hairpin-helix motif Dynactin_p22 PF07426.11 ORF97023 - 1.7e-13 50.8 4.6 2.2e-13 50.4 4.6 1.1 1 0 0 1 1 1 1 Dynactin subunit p22 DUF948 PF06103.11 ORF97023 - 0.023 15.0 0.9 0.068 13.4 0.6 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Imm3 PF14425.6 ORF97023 - 0.035 14.1 1.7 0.035 14.1 1.7 1.9 1 1 1 2 2 2 0 Immunity protein Imm3 DUF1664 PF07889.12 ORF97023 - 0.26 11.3 2.8 0.63 10.1 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Calpain_III PF01067.22 ORF96886 - 0.045 14.0 0.0 0.072 13.3 0.0 1.3 1 0 0 1 1 1 0 Calpain large subunit, domain III EF-hand_6 PF13405.6 ORF96886 - 0.052 13.5 0.1 0.2 11.7 0.1 1.9 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 ORF96886 - 0.085 12.4 0.0 0.21 11.2 0.0 1.7 2 0 0 2 2 2 0 EF hand EF-hand_5 PF13202.6 ORF96886 - 0.2 11.2 2.3 0.33 10.5 0.3 2.3 2 0 0 2 2 2 0 EF hand Chorion_2 PF03964.15 ORF9677 - 0.054 14.3 0.1 0.072 13.9 0.1 1.3 1 0 0 1 1 1 0 Chorion family 2 DHHC PF01529.20 ORF9677 - 0.098 12.8 0.9 0.098 12.8 0.9 1.5 2 0 0 2 2 2 0 DHHC palmitoyltransferase Nnf1 PF03980.14 ORF96626 - 0.00022 21.6 1.1 0.00037 20.8 1.1 1.4 1 0 0 1 1 1 1 Nnf1 Spc7 PF08317.11 ORF96626 - 0.0026 16.7 8.2 0.0032 16.4 8.2 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein JAKMIP_CC3 PF16034.5 ORF96626 - 0.022 14.7 7.8 0.029 14.3 7.8 1.3 1 1 0 1 1 1 0 JAKMIP CC3 domain CENP-F_leu_zip PF10473.9 ORF96626 - 0.029 14.4 9.6 0.62 10.1 2.5 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4164 PF13747.6 ORF96626 - 0.031 14.5 5.1 0.049 13.9 2.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) Tektin PF03148.14 ORF96626 - 0.032 13.0 9.7 0.043 12.6 4.5 2.0 1 1 1 2 2 2 0 Tektin family DUF1359 PF07097.11 ORF96626 - 0.039 14.2 6.0 0.094 13.0 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1359) bZIP_2 PF07716.15 ORF96626 - 0.064 13.3 0.7 0.064 13.3 0.7 2.2 2 1 0 2 2 2 0 Basic region leucine zipper Baculo_PEP_C PF04513.12 ORF96626 - 0.11 12.5 6.6 0.18 11.8 1.2 2.0 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus LCAT PF02450.15 ORF96626 - 0.15 11.2 2.3 0.17 11.0 2.3 1.0 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase MRPL52 PF18699.1 ORF96626 - 0.19 12.0 5.3 7.3 6.8 0.1 2.2 1 1 1 2 2 2 0 Mitoribosomal protein mL52 RBD-FIP PF09457.10 ORF96626 - 0.22 11.5 1.9 5.2 7.1 0.1 2.9 3 1 0 3 3 3 0 FIP domain DUF1664 PF07889.12 ORF96626 - 0.26 11.3 7.3 3.8 7.6 5.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) AAA_23 PF13476.6 ORF96626 - 0.92 10.0 8.0 1.1 9.7 8.0 1.1 1 0 0 1 1 1 0 AAA domain SlyX PF04102.12 ORF96626 - 7.2 7.3 7.5 20 5.9 0.1 2.6 1 1 1 2 2 2 0 SlyX SKI PF01202.22 ORF95985 - 0.12 12.5 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Shikimate kinase SAM_MT PF04445.13 ORF95713 - 0.16 11.4 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase DUF3613 PF12266.8 ORF95713 - 0.52 10.1 3.4 2.7 7.8 3.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3613) DUF676 PF05057.14 ORF94718 - 0.00081 19.0 0.0 0.0013 18.3 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Transglut_N PF00868.20 ORF92531 - 0.48 10.8 3.6 11 6.3 0.2 2.2 1 1 1 2 2 2 0 Transglutaminase family zf-met PF12874.7 ORF92531 - 1.2 9.6 3.8 23 5.6 0.4 2.4 2 0 0 2 2 2 0 Zinc-finger of C2H2 type TRI12 PF06609.13 ORF9225 - 0.057 11.8 0.1 0.071 11.5 0.1 1.1 1 0 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) Rnf-Nqr PF02508.14 ORF92087 - 0.3 11.0 5.1 0.38 10.7 5.1 1.1 1 0 0 1 1 1 0 Rnf-Nqr subunit, membrane protein Ras PF00071.22 ORF9091 - 2e-22 79.5 0.0 2.3e-22 79.4 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF9091 - 9.1e-05 22.7 0.0 0.00013 22.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF9091 - 0.0083 15.6 0.0 0.01 15.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family BLOC1_2 PF10046.9 ORF90479 - 0.00016 21.9 9.8 0.00016 21.9 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_TATA_bd PF12325.8 ORF90479 - 0.0046 17.2 10.6 0.27 11.4 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding Spc7 PF08317.11 ORF90479 - 0.013 14.4 8.8 0.016 14.1 8.8 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein GAS PF13851.6 ORF90479 - 0.014 14.7 13.0 0.014 14.7 12.1 1.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF90479 - 0.014 12.9 6.3 0.017 12.6 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Leu_zip PF15294.6 ORF90479 - 0.018 14.5 10.1 0.023 14.2 10.1 1.1 1 0 0 1 1 1 0 Leucine zipper Vps53_N PF04100.12 ORF90479 - 0.024 13.6 6.9 0.041 12.9 6.9 1.5 1 1 0 1 1 1 0 Vps53-like, N-terminal Baculo_PEP_C PF04513.12 ORF90479 - 0.024 14.7 6.6 0.03 14.4 6.6 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 ORF90479 - 0.049 13.7 9.6 0.36 10.9 4.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) PRKG1_interact PF15898.5 ORF90479 - 0.057 14.3 6.4 0.56 11.1 0.5 2.3 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain ZnuA PF01297.17 ORF90479 - 0.06 12.7 1.5 0.079 12.4 1.5 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic DivIC PF04977.15 ORF90479 - 0.096 12.5 9.2 2.2 8.1 1.5 2.5 1 1 1 2 2 2 0 Septum formation initiator CEP63 PF17045.5 ORF90479 - 0.097 12.6 9.8 0.41 10.5 9.8 1.8 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa Tuberin PF03542.16 ORF90479 - 0.098 11.7 2.9 0.1 11.7 2.9 1.0 1 0 0 1 1 1 0 Tuberin ATG16 PF08614.11 ORF90479 - 0.12 12.6 8.6 1.3 9.2 1.4 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) EP400_N PF15790.5 ORF90479 - 0.12 11.2 0.9 0.14 11.0 0.9 1.1 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal TSNAXIP1_N PF15739.5 ORF90479 - 0.13 12.6 0.7 0.13 12.6 0.7 2.3 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus RasGAP_C PF03836.15 ORF90479 - 0.18 11.9 8.5 2.4 8.3 2.8 2.1 1 1 1 2 2 2 0 RasGAP C-terminus Fib_alpha PF08702.10 ORF90479 - 0.21 11.8 11.1 0.6 10.3 10.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Macoilin PF09726.9 ORF90479 - 0.26 9.8 7.5 0.36 9.3 7.5 1.2 1 0 0 1 1 1 0 Macoilin family TMPIT PF07851.13 ORF90479 - 0.26 10.5 6.8 0.15 11.2 4.4 1.5 1 1 0 1 1 1 0 TMPIT-like protein Spc24 PF08286.11 ORF90479 - 0.27 11.5 10.8 0.62 10.3 3.3 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF90479 - 0.37 11.1 10.1 4.7 7.6 1.0 2.2 1 1 1 2 2 2 0 Tup N-terminal UPF0242 PF06785.11 ORF90479 - 0.66 10.1 9.6 0.78 9.8 9.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Csm2_III-A PF03750.13 ORF90479 - 0.76 10.6 5.9 0.54 11.1 1.9 2.0 1 1 1 2 2 2 0 Csm2 Type III-A BPL_N PF09825.9 ORF90479 - 0.81 8.7 4.6 0.91 8.5 4.6 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal FlaC_arch PF05377.11 ORF90479 - 0.95 9.9 13.4 49 4.4 1.0 3.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF5595 PF18077.1 ORF90479 - 1.6 8.9 8.3 1.8 8.7 2.3 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5595) USP8_interact PF08941.10 ORF90479 - 1.7 8.5 8.7 0.31 10.8 0.8 2.0 1 1 1 2 2 2 0 USP8 interacting NPV_P10 PF05531.12 ORF90479 - 3.6 8.1 10.6 4.8 7.7 7.0 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 ORF90479 - 5.6 7.7 10.9 4.3e+02 1.6 10.9 2.2 1 1 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF90479 - 6.3 7.5 8.0 14 6.4 3.1 2.5 1 1 2 3 3 3 0 SlyX tRNA-synt_2c PF01411.19 ORF90414 - 1.2e-14 53.8 0.7 1.3e-14 53.7 0.7 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) DUF5566 PF17721.1 ORF90414 - 0.074 13.3 0.0 0.083 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5566) DUF4129 PF13559.6 ORF86183 - 0.092 13.0 0.1 0.15 12.4 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4129) PAP_assoc PF03828.19 ORF85161 - 4.9e-07 29.9 0.2 9.1e-07 29.0 0.2 1.5 1 0 0 1 1 1 1 Cid1 family poly A polymerase Pkinase PF00069.25 ORF83981 - 1.7e-24 86.7 0.1 1.8e-24 86.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83981 - 5.6e-12 45.5 0.1 6.2e-12 45.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase TCP PF03634.13 ORF82636 - 0.28 11.8 7.2 0.4 11.2 7.2 1.2 1 0 0 1 1 1 0 TCP family transcription factor UvrD-helicase PF00580.21 ORF82600 - 0.067 12.7 2.0 0.077 12.5 2.0 1.0 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain RsgA_GTPase PF03193.16 ORF82537 - 7.3e-07 29.2 0.0 9.2e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase PduV-EutP PF10662.9 ORF82537 - 9.2e-05 22.2 0.0 0.00017 21.3 0.0 1.6 2 0 0 2 2 1 1 Ethanolamine utilisation - propanediol utilisation MMR_HSR1 PF01926.23 ORF82537 - 0.00023 21.2 0.0 0.00039 20.5 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Septin PF00735.18 ORF82537 - 0.00033 20.0 0.6 0.00089 18.6 0.0 1.8 1 1 1 2 2 2 1 Septin ABC_tran PF00005.27 ORF82537 - 0.00041 20.9 0.1 0.00091 19.8 0.0 1.6 1 1 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF82537 - 0.0014 18.3 0.0 0.0032 17.2 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain FtsK_SpoIIIE PF01580.18 ORF82537 - 0.0015 17.9 0.0 0.0021 17.4 0.0 1.2 1 0 0 1 1 1 1 FtsK/SpoIIIE family T2SSE PF00437.20 ORF82537 - 0.0025 16.9 0.0 0.0028 16.8 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_7 PF12775.7 ORF82537 - 0.0033 17.0 0.0 0.0044 16.5 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_22 PF13401.6 ORF82537 - 0.0042 17.3 0.0 0.0058 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 ORF82537 - 0.0062 16.4 0.3 0.014 15.3 0.1 1.6 1 1 1 2 2 2 1 Deoxynucleoside kinase Roc PF08477.13 ORF82537 - 0.0076 16.5 0.4 0.019 15.2 0.1 2.0 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase RNA_helicase PF00910.22 ORF82537 - 0.0084 16.5 0.1 0.022 15.1 0.0 1.8 2 1 0 2 2 1 1 RNA helicase AAA_16 PF13191.6 ORF82537 - 0.011 16.1 0.0 0.013 15.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 ORF82537 - 0.011 16.2 0.2 0.019 15.5 0.0 1.5 2 0 0 2 2 1 0 AAA domain TniB PF05621.11 ORF82537 - 0.011 15.1 0.0 0.015 14.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein Dynamin_N PF00350.23 ORF82537 - 0.013 15.5 1.7 0.018 15.1 0.0 2.0 2 1 1 3 3 3 0 Dynamin family GTP_EFTU PF00009.27 ORF82537 - 0.014 15.0 0.1 0.022 14.3 0.1 1.4 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain DUF87 PF01935.17 ORF82537 - 0.019 15.1 0.7 0.082 13.0 0.1 2.0 1 1 1 2 2 2 0 Helicase HerA, central domain IIGP PF05049.13 ORF82537 - 0.023 13.7 0.1 0.025 13.6 0.1 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA_28 PF13521.6 ORF82537 - 0.03 14.6 0.0 0.074 13.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 ORF82537 - 0.031 14.3 0.0 0.045 13.7 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF815 PF05673.13 ORF82537 - 0.05 12.8 0.0 0.063 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_14 PF13173.6 ORF82537 - 0.056 13.5 0.2 0.13 12.3 0.0 1.5 1 1 1 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF82537 - 0.06 12.6 0.0 0.093 12.0 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin Arf PF00025.21 ORF82537 - 0.077 12.4 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 ADP-ribosylation factor family cobW PF02492.19 ORF82537 - 0.077 12.6 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 ORF82537 - 0.086 13.0 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain Ploopntkinase3 PF18751.1 ORF82537 - 0.099 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 IstB_IS21 PF01695.17 ORF82537 - 0.12 12.1 0.0 0.2 11.4 0.0 1.5 1 1 0 1 1 1 0 IstB-like ATP binding protein YojJ PF10372.9 ORF82537 - 0.12 12.5 0.7 0.21 11.7 0.7 1.4 1 0 0 1 1 1 0 Bacterial membrane-spanning protein N-terminus AAA_23 PF13476.6 ORF82537 - 1.6 9.2 10.1 0.27 11.7 2.8 2.5 1 1 1 2 2 2 0 AAA domain ALG3 PF05208.13 ORF82516 - 4.7e-17 62.5 5.9 5.1e-17 62.3 5.9 1.0 1 0 0 1 1 1 1 ALG3 protein DUF2892 PF11127.8 ORF82239 - 0.016 15.2 1.4 0.016 15.2 1.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) K-cyclin_vir_C PF09080.10 ORF82239 - 1.1 9.7 6.0 0.24 11.8 2.9 1.5 2 0 0 2 2 2 0 K cyclin, C terminal PMP1_2 PF08114.11 ORF81639 - 0.092 12.5 1.0 0.17 11.6 1.0 1.4 1 0 0 1 1 1 0 ATPase proteolipid family zf-RING_2 PF13639.6 ORF8153 - 2.5e-13 50.1 7.0 3.5e-13 49.6 7.0 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF8153 - 1.7e-08 34.1 4.5 1.7e-08 34.1 4.5 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF8153 - 2.4e-08 33.7 5.0 3.4e-08 33.2 5.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF8153 - 9.5e-08 31.9 3.3 1e-07 31.8 0.7 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF8153 - 1.2e-07 31.9 7.4 1.8e-07 31.4 7.4 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF8153 - 3.7e-07 30.0 5.4 5.4e-07 29.5 5.4 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF8153 - 6.3e-07 29.4 3.0 9.6e-07 28.8 3.0 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF8153 - 1e-06 28.5 4.8 1.5e-06 28.0 4.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF8153 - 1.1e-06 28.4 7.1 1.7e-06 27.7 7.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF8153 - 1.2e-05 25.1 5.6 2e-05 24.3 5.6 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF8153 - 0.0003 20.4 5.4 0.00049 19.7 5.4 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF8153 - 0.0082 16.3 5.6 0.0082 16.3 5.6 1.8 1 1 1 2 2 2 1 RING-variant domain FANCL_C PF11793.8 ORF8153 - 0.023 14.9 8.2 0.14 12.3 8.2 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_1 PF14446.6 ORF8153 - 0.068 13.1 2.1 0.068 13.1 2.1 2.0 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4_4 PF15227.6 ORF8153 - 0.11 12.6 7.1 1.5 9.0 7.2 2.2 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF8153 - 0.12 12.2 5.4 0.23 11.3 5.4 1.5 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 ORF8153 - 0.34 11.3 4.8 0.55 10.6 4.8 1.5 1 1 0 1 1 1 0 RING-like domain DUF4829 PF16111.5 ORF8111 - 0.11 13.2 0.0 0.16 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4829) HP0268 PF18618.1 ORF80413 - 0.055 13.9 1.0 1.9 8.9 0.2 2.1 2 0 0 2 2 2 0 HP0268 Cupin_7 PF12973.7 ORF80039 - 3.7e-09 36.4 0.0 4.8e-09 36.0 0.0 1.2 1 0 0 1 1 1 1 ChrR Cupin-like domain PfkB PF00294.24 ORF80021 - 6.1e-28 98.0 0.1 7.2e-28 97.8 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase RCC1_2 PF13540.6 ORF79919 - 4.9e-07 29.4 1.8 0.011 15.5 0.0 2.8 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF79919 - 0.18 11.7 0.4 2.2 8.2 0.0 2.1 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family Epimerase PF01370.21 ORF79716 - 1.3e-13 51.0 0.0 1.4e-13 50.9 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF79716 - 6.4e-13 48.8 0.0 6.9e-13 48.7 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 ORF79716 - 1.2e-08 34.4 0.0 1.3e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 ORF79716 - 2.5e-06 26.9 0.0 2.8e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF79716 - 5.7e-05 22.4 0.0 0.00029 20.1 0.0 1.8 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF79716 - 0.00031 20.7 0.0 0.00039 20.4 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 ORF79716 - 0.0026 16.9 0.0 0.0041 16.3 0.0 1.3 1 1 0 1 1 1 1 RmlD substrate binding domain Sacchrp_dh_NADP PF03435.18 ORF79716 - 0.061 13.6 0.0 0.1 12.9 0.0 1.5 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain KR PF08659.10 ORF79716 - 0.14 12.0 0.0 0.21 11.5 0.0 1.4 1 1 0 1 1 1 0 KR domain Sec15 PF04091.12 ORF76967 - 5.7e-13 49.0 1.9 6.4e-13 48.8 1.9 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DIL PF01843.19 ORF76967 - 0.016 15.5 0.2 0.028 14.7 0.2 1.5 1 1 0 1 1 1 0 DIL domain HipN PF18253.1 ORF76967 - 0.059 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain Pox_P35 PF03213.14 ORF769 - 0.06 12.6 5.0 0.074 12.3 5.0 1.1 1 0 0 1 1 1 0 Poxvirus P35 protein Aldedh PF00171.22 ORF769 - 0.14 10.7 0.6 0.18 10.3 0.6 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family HTH_40 PF14493.6 ORF769 - 1.2 9.7 7.5 0.26 11.8 2.3 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain Hom_end_hint PF05203.16 ORF769 - 3.3 7.6 6.5 0.83 9.6 2.7 1.7 1 1 1 2 2 2 0 Hom_end-associated Hint DUF5617 PF18493.1 ORF76066 - 0.042 13.9 1.6 0.059 13.5 1.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5617) Ribosomal_L5 PF00281.19 ORF76066 - 0.071 13.5 0.2 0.12 12.8 0.2 1.4 1 0 0 1 1 1 0 Ribosomal protein L5 DUF645 PF04875.12 ORF76066 - 0.11 12.5 0.2 0.54 10.4 0.1 2.0 2 1 0 2 2 2 0 Protein of unknown function, DUF645 dUTPase_2 PF08761.11 ORF76066 - 0.15 12.2 2.8 0.14 12.3 0.5 1.8 1 1 1 2 2 2 0 dUTPase Tim17 PF02466.19 ORF75415 - 0.00053 20.3 0.0 0.00079 19.8 0.0 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family DUF1828 PF08861.10 ORF75386 - 0.052 13.8 1.0 0.11 12.7 0.5 1.7 1 1 1 2 2 2 0 Domain of unknown function DUF1828 Glyoxalase PF00903.25 ORF75126 - 2e-22 79.8 0.0 2.2e-22 79.6 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF75126 - 1.2e-11 44.8 0.0 1.5e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 ORF75126 - 3.7e-06 27.2 0.0 4.5e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 ORF75126 - 2.6e-05 24.1 0.0 3.7e-05 23.6 0.0 1.2 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 ORF75126 - 6.7e-05 23.6 0.0 0.00011 23.0 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain DivIC PF04977.15 ORF73906 - 6.3 6.7 7.4 1.7 8.5 1.5 2.5 3 0 0 3 3 3 0 Septum formation initiator BACON PF13004.7 ORF73741 - 0.052 13.5 0.1 0.099 12.7 0.1 1.4 1 0 0 1 1 1 0 Putative binding domain, N-terminal FAD_binding_4 PF01565.23 ORF73410 - 0.0014 18.4 1.9 0.0024 17.6 1.9 1.5 1 1 0 1 1 1 1 FAD binding domain Gly-zipper_Omp PF13488.6 ORF73410 - 0.022 14.7 20.4 0.037 14.0 20.4 1.3 1 0 0 1 1 1 0 Glycine zipper Bacteriocin_IIc PF10439.9 ORF73410 - 0.67 10.1 13.3 1.2 9.3 13.3 1.5 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide NUDIX PF00293.28 ORF73350 - 3.3e-21 75.7 0.8 4e-21 75.4 0.8 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 ORF73350 - 1.8e-13 50.5 0.1 2e-13 50.3 0.1 1.0 1 0 0 1 1 1 1 NUDIX domain HTH_AraC PF00165.23 ORF72734 - 9e-22 76.6 0.1 8.5e-10 38.5 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 ORF72734 - 6.2e-21 74.5 0.0 1e-20 73.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Sec15 PF04091.12 ORF72058 - 5.7e-13 49.0 1.9 6.4e-13 48.8 1.9 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DIL PF01843.19 ORF72058 - 0.016 15.5 0.2 0.028 14.7 0.2 1.5 1 1 0 1 1 1 0 DIL domain HipN PF18253.1 ORF72058 - 0.059 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain ECH_1 PF00378.20 ORF71338 - 5.5e-15 55.4 0.0 6.1e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF71338 - 1.1e-06 28.5 0.0 1.3e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF1759 PF03564.15 ORF70463 - 0.00066 19.6 4.1 0.00084 19.3 4.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) HSCB_C PF07743.13 ORF70463 - 0.048 14.1 3.2 0.35 11.4 3.2 2.2 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain Mt_ATP-synt_D PF05873.12 ORF70463 - 0.22 11.4 9.1 0.36 10.7 7.3 1.9 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) TMPIT PF07851.13 ORF70463 - 2.6 7.2 9.6 3.1 7.0 9.6 1.2 1 0 0 1 1 1 0 TMPIT-like protein Ank_4 PF13637.6 ORF69189 - 1.3e-18 67.1 2.2 4.2e-07 30.4 0.0 3.7 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF69189 - 1.6e-18 66.5 0.6 4.2e-09 36.5 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF69189 - 7.6e-18 62.8 0.3 1.2e-05 25.3 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF69189 - 1.4e-17 63.3 0.1 1.2e-06 28.6 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank_2 PF12796.7 ORF69189 - 1.1e-16 61.2 0.1 7.7e-10 39.2 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) DUF4829 PF16111.5 ORF67923 - 0.11 13.2 0.0 0.16 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4829) FtsK_gamma PF09397.10 ORF67636 - 4e-30 103.4 0.1 5.3e-30 103.0 0.1 1.2 1 0 0 1 1 1 1 Ftsk gamma domain FeoC PF09012.10 ORF67636 - 0.14 12.3 0.0 0.31 11.1 0.0 1.5 2 0 0 2 2 2 0 FeoC like transcriptional regulator ECH_1 PF00378.20 ORF66995 - 2.8e-16 59.6 0.0 1.5e-15 57.2 0.0 1.8 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF66995 - 1.2e-08 34.9 0.0 1.2e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ZoocinA_TRD PF16775.5 ORF66995 - 0.074 13.2 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Target recognition domain of lytic exoenzyme tRNA_lig_kinase PF08303.11 ORF66995 - 0.096 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 tRNA ligase kinase domain Epimerase PF01370.21 ORF66779 - 1.3e-13 51.0 0.0 1.4e-13 50.9 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF66779 - 6.4e-13 48.8 0.0 6.9e-13 48.7 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 ORF66779 - 1.2e-08 34.4 0.0 1.3e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 ORF66779 - 2.5e-06 26.9 0.0 2.8e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF66779 - 5.7e-05 22.4 0.0 0.00029 20.1 0.0 1.8 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF66779 - 0.00031 20.7 0.0 0.00039 20.4 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 ORF66779 - 0.0026 16.9 0.0 0.0041 16.3 0.0 1.3 1 1 0 1 1 1 1 RmlD substrate binding domain Sacchrp_dh_NADP PF03435.18 ORF66779 - 0.061 13.6 0.0 0.1 12.9 0.0 1.5 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain KR PF08659.10 ORF66779 - 0.14 12.0 0.0 0.21 11.5 0.0 1.4 1 1 0 1 1 1 0 KR domain DUF872 PF05915.12 ORF66427 - 0.099 12.8 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) UPF0220 PF05255.11 ORF66427 - 0.16 11.5 1.1 1.1 8.8 0.1 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0220) POC3_POC4 PF10448.9 ORF66223 - 0.02 14.9 1.4 0.026 14.5 1.4 1.3 1 1 0 1 1 1 0 20S proteasome chaperone assembly proteins 3 and 4 AAA_lid_2 PF17863.1 ORF66223 - 0.17 11.8 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA lid domain USP7_C2 PF14533.6 ORF65936 - 0.13 12.0 0.0 0.53 10.0 0.0 1.8 1 1 0 1 1 1 0 Ubiquitin-specific protease C-terminal P2_N PF18628.1 ORF64692 - 0.11 12.2 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Viral coat protein P2 N-terminal domain Ral PF11058.8 ORF64150 - 0.0088 15.6 3.5 1.6 8.3 0.1 2.8 3 0 0 3 3 3 2 Antirestriction protein Ral Ferlin_C PF16165.5 ORF64068 - 0.12 12.3 2.3 0.24 11.3 2.3 1.6 1 1 0 1 1 1 0 Ferlin C-terminus GCV_H PF01597.19 ORF63753 - 2.8e-50 169.3 0.1 3.1e-50 169.2 0.1 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein RnfC_N PF13375.6 ORF63753 - 0.00086 19.2 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Biotin_lipoyl PF00364.22 ORF63753 - 0.0019 18.0 0.1 0.0038 17.0 0.1 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme UPF0492 PF15744.5 ORF62094 - 0.049 12.9 4.0 0.052 12.8 4.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0492 DUF1298 PF06974.13 ORF62014 - 0.00014 21.8 0.1 0.00016 21.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Calpain_III PF01067.22 ORF61632 - 0.00046 20.5 0.0 0.0019 18.5 0.0 1.8 1 1 0 1 1 1 1 Calpain large subunit, domain III Staph_haemo PF05480.11 ORF60545 - 0.079 12.7 0.3 1.4 8.8 0.1 2.3 2 0 0 2 2 2 0 Staphylococcus haemolytic protein Fumarate_red_C PF02300.17 ORF60545 - 0.1 12.7 3.2 1.9 8.5 0.7 2.1 2 0 0 2 2 2 0 Fumarate reductase subunit C GREB1 PF15782.5 ORF59914 - 3.3 4.7 13.0 3.6 4.6 13.0 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer PIEZO PF15917.5 ORF59914 - 8.4 5.8 18.9 10 5.5 18.9 1.1 1 0 0 1 1 1 0 Piezo Pkinase PF00069.25 ORF59658 - 9.4e-17 61.2 1.1 1e-16 61.1 1.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF59658 - 1.3e-11 44.3 0.2 1.3e-11 44.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF5482 PF17579.2 ORF59658 - 0.026 14.4 0.6 0.038 13.9 0.4 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5482) LAMTOR5 PF16672.5 ORF59224 - 0.0041 17.0 1.0 23 5.0 0.0 3.8 2 1 1 4 4 4 2 Ragulator complex protein LAMTOR5 HNH_3 PF13392.6 ORF59224 - 0.0051 16.5 4.4 14 5.6 0.0 4.1 4 0 0 4 4 4 2 HNH endonuclease LPD11 PF18824.1 ORF55070 - 0.075 13.1 0.2 0.17 12.0 0.2 1.6 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 11 Arm_3 PF16186.5 ORF53579 - 1.8e-18 65.8 0.4 3.9e-18 64.7 0.4 1.6 1 0 0 1 1 1 1 Atypical Arm repeat Arm_2 PF04826.13 ORF53579 - 5.5e-05 22.8 1.0 0.2 11.1 0.4 2.0 1 1 1 2 2 2 2 Armadillo-like Arm PF00514.23 ORF53579 - 7.6e-05 22.6 0.3 0.41 10.8 0.0 3.1 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat Clathrin PF00637.20 ORF53579 - 0.0064 16.4 0.8 0.57 10.1 0.1 2.1 2 0 0 2 2 2 2 Region in Clathrin and VPS Torsin PF06309.11 ORF53579 - 0.018 15.1 0.0 0.036 14.1 0.0 1.5 1 0 0 1 1 1 0 Torsin Tic110 PF16940.5 ORF53579 - 0.019 13.5 0.0 0.019 13.5 0.0 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter RNase_J_C PF17770.1 ORF53579 - 0.033 15.2 0.5 0.13 13.3 0.1 2.0 2 1 0 2 2 2 0 Ribonuclease J C-terminal domain SASA PF03629.18 ORF53579 - 0.046 13.4 0.0 0.052 13.2 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate esterase, sialic acid-specific acetylesterase Histone_H2A_C PF16211.5 ORF52281 - 8.8e-16 57.4 0.1 1.4e-15 56.7 0.1 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 ORF52281 - 5.8e-15 55.8 0.0 6.9e-15 55.6 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF52281 - 8.3e-06 26.0 0.0 1.3e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone cNMP_binding PF00027.29 ORF52140 - 1.9e-08 34.2 0.0 0.0007 19.6 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Peptidase_U32 PF01136.19 ORF51561 - 0.17 11.0 0.2 0.17 11.0 0.2 1.1 1 0 0 1 1 1 0 Peptidase family U32 Thioredoxin_6 PF13848.6 ORF5128 - 4.9e-05 23.3 0.6 0.0015 18.5 0.0 2.0 1 1 1 2 2 2 2 Thioredoxin-like domain ApoO PF09769.9 ORF51256 - 0.046 13.7 0.1 0.066 13.2 0.1 1.2 1 0 0 1 1 1 0 Apolipoprotein O DUF3382 PF11862.8 ORF51014 - 0.033 14.4 0.5 0.086 13.1 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3382) CtaG_Cox11 PF04442.14 ORF50706 - 0.088 12.8 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 GST_C_3 PF14497.6 ORF49821 - 1.4e-18 66.9 0.1 1.9e-18 66.5 0.1 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF49821 - 2.9e-05 24.2 0.6 5.6e-05 23.3 0.5 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF49821 - 0.0016 18.4 0.0 0.0025 17.8 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain RRP36 PF06102.12 ORF49821 - 0.072 13.1 0.7 0.099 12.6 0.7 1.2 1 0 0 1 1 1 0 rRNA biogenesis protein RRP36 DUF2946 PF11162.8 ORF4921 - 0.0088 16.7 0.1 0.013 16.2 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2946) F_bP_aldolase PF01116.20 ORF49076 - 0.0017 17.9 0.2 0.0028 17.2 0.2 1.3 1 1 0 1 1 1 1 Fructose-bisphosphate aldolase class-II MFS_1 PF07690.16 ORF48233 - 2.1e-13 49.9 0.1 2.1e-13 49.9 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sox_N PF12444.8 ORF47528 - 0.36 12.0 2.2 4.2 8.6 2.2 2.2 1 1 0 1 1 1 0 Sox developmental protein N terminal DUF4131 PF13567.6 ORF47196 - 4 7.1 4.9 5.4 6.6 4.9 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Sec23_trunk PF04811.15 ORF46540 - 5.6e-06 26.1 0.5 6.9e-06 25.8 0.5 1.1 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain DUF2585 PF10755.9 ORF46540 - 0.16 11.7 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2585) DUF2635 PF10948.8 ORF46528 - 1.3 8.8 0.1 1.3 8.8 0.1 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2635) ASFV_L11L PF05293.11 ORF45958 - 0.05 14.0 0.0 0.067 13.5 0.0 1.2 1 0 0 1 1 1 0 African swine fever virus (ASFV) L11L protein Pkinase PF00069.25 ORF45904 - 0.017 14.5 0.3 0.042 13.2 0.1 1.7 2 0 0 2 2 2 0 Protein kinase domain Glyco_transf_20 PF00982.21 ORF45178 - 7.7e-40 137.0 0.0 8.6e-40 136.8 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 Luteo_PO PF04662.13 ORF45178 - 0.099 12.3 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Luteovirus P0 protein DUF3645 PF12359.8 ORF43634 - 0.024 14.0 0.0 0.047 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3645) SOR_SNZ PF01680.17 ORF43634 - 0.091 12.5 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 SOR/SNZ family DUF3021 PF11457.8 ORF43090 - 0.049 14.0 7.7 0.12 12.7 4.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3021) MerC PF03203.14 ORF43090 - 0.08 13.4 8.6 0.11 13.0 8.6 1.2 1 0 0 1 1 1 0 MerC mercury resistance protein PNTB PF02233.16 ORF43090 - 0.11 11.3 8.2 0.11 11.3 6.8 1.6 1 1 1 2 2 2 0 NAD(P) transhydrogenase beta subunit DUF4229 PF14012.6 ORF43090 - 0.75 9.9 5.3 0.77 9.9 3.9 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4229) Aconitase_C PF00694.19 ORF4216 - 0.0047 17.2 1.2 0.0063 16.8 1.1 1.3 1 1 0 1 1 1 1 Aconitase C-terminal domain zf-RING_2 PF13639.6 ORF4118 - 5.3e-11 42.7 6.1 7.8e-11 42.1 6.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF4118 - 2e-09 37.2 7.3 2.9e-09 36.6 7.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF4118 - 6.5e-09 35.5 6.5 9.3e-09 35.0 6.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF4118 - 5.2e-08 32.6 4.5 7.2e-08 32.2 4.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF4118 - 8.2e-08 31.9 4.7 6.4e-07 29.0 2.6 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF4118 - 6.6e-06 26.0 3.6 0.00028 20.8 1.1 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF4118 - 9.8e-06 25.8 7.6 9.1e-05 22.7 7.6 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF4118 - 1.5e-05 25.1 4.0 4.5e-05 23.5 4.3 1.7 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF4118 - 8.3e-05 22.5 6.1 0.00018 21.4 6.1 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF4118 - 0.00029 20.6 3.8 0.00047 20.0 3.8 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Rad50_zn_hook PF04423.14 ORF4118 - 0.0082 16.0 0.1 0.021 14.6 0.1 1.7 1 0 0 1 1 1 1 Rad50 zinc hook motif zf-ANAPC11 PF12861.7 ORF4118 - 0.025 14.6 4.7 0.11 12.5 4.7 2.1 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_4 PF14570.6 ORF4118 - 0.028 14.2 5.6 0.094 12.5 5.6 1.8 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-HC5HC2H PF13771.6 ORF4118 - 0.034 14.4 4.7 0.29 11.4 3.7 2.2 1 1 1 2 2 2 0 PHD-like zinc-binding domain zf-C2HC_2 PF13913.6 ORF4118 - 0.079 12.9 1.2 0.079 12.9 1.2 2.4 2 0 0 2 2 2 0 zinc-finger of a C2HC-type RecR PF02132.15 ORF4118 - 0.75 9.4 5.1 4.4 6.9 0.3 2.3 2 0 0 2 2 2 0 RecR protein Zf_RING PF16744.5 ORF4118 - 0.95 9.6 5.0 8.6 6.6 5.0 2.1 1 1 0 1 1 1 0 KIAA1045 RING finger FANCL_C PF11793.8 ORF4118 - 2.8 8.2 8.2 84 3.5 8.2 2.9 1 1 0 1 1 1 0 FANCL C-terminal domain Sugar_tr PF00083.24 ORF41081 - 2.3e-13 49.8 8.0 2.6e-13 49.6 8.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF998 PF06197.13 ORF41081 - 0.0082 15.8 0.3 0.0086 15.7 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF998) DUF2206 PF09971.9 ORF41081 - 0.021 13.6 5.0 0.024 13.4 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) EamA PF00892.20 ORF41081 - 0.037 14.2 11.9 1.8 8.7 12.8 2.0 1 1 1 2 2 2 0 EamA-like transporter family DUF2070 PF09843.9 ORF41081 - 0.064 11.5 6.8 0.069 11.4 6.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) SecY PF00344.20 ORF41081 - 0.17 11.1 8.0 0.21 10.8 8.0 1.0 1 0 0 1 1 1 0 SecY translocase Popeye PF04831.13 ORF41081 - 0.62 10.2 3.8 0.58 10.3 3.2 1.3 1 1 0 1 1 1 0 Popeye protein conserved region DUF4131 PF13567.6 ORF41081 - 0.82 9.3 2.5 0.35 10.5 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) SCAMP PF04144.13 ORF41081 - 1.2 9.5 12.0 1.5 9.1 12.0 1.1 1 0 0 1 1 1 0 SCAMP family Viral_Beta_CD PF04530.12 ORF41081 - 1.4 9.2 4.2 0.46 10.8 0.7 1.9 1 1 0 2 2 2 0 Viral Beta C/D like family Kinesin PF00225.23 ORF40802 - 7.4e-19 67.8 0.4 1.6e-18 66.8 0.4 1.5 1 1 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF40802 - 1.1e-11 44.8 0.3 5.5e-11 42.6 0.3 1.8 1 1 0 1 1 1 1 Microtubule binding DUF2946 PF11162.8 ORF40454 - 0.0088 16.7 0.1 0.013 16.2 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2946) SLBP_RNA_bind PF15247.6 ORF39735 - 0.36 11.0 2.8 0.67 10.1 2.8 1.5 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain KH_6 PF15985.5 ORF38883 - 0.12 12.7 0.0 0.97 9.8 0.0 2.0 2 0 0 2 2 2 0 KH domain DUF1518 PF07469.12 ORF38883 - 0.13 12.7 0.6 0.13 12.7 0.6 2.9 3 1 0 3 3 3 0 Domain of unknown function (DUF1518) DRY_EERY PF09750.9 ORF3765 - 1.4e-05 25.3 0.4 8.6e-05 22.8 0.1 1.9 1 1 1 2 2 2 1 Alternative splicing regulator CDPS PF16715.5 ORF3765 - 0.0066 16.1 0.7 0.013 15.1 0.1 1.6 2 0 0 2 2 2 1 Cyclodipeptide synthase Inhibitor_Mig-6 PF11555.8 ORF35028 - 0.025 14.7 1.4 0.055 13.6 1.4 1.6 1 1 0 1 1 1 0 EGFR receptor inhibitor Mig-6 MRP-L20 PF12824.7 ORF3451 - 0.11 12.7 0.6 0.14 12.3 0.6 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 Sec15 PF04091.12 ORF33637 - 5.7e-13 49.0 1.9 6.4e-13 48.8 1.9 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DIL PF01843.19 ORF33637 - 0.016 15.5 0.2 0.028 14.7 0.2 1.5 1 1 0 1 1 1 0 DIL domain HipN PF18253.1 ORF33637 - 0.059 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain TMEM52 PF14979.6 ORF33186 - 1.4 8.8 3.2 8.7 6.3 1.6 2.0 2 0 0 2 2 2 0 Transmembrane 52 Pkinase PF00069.25 ORF32980 - 0.017 14.5 0.3 0.042 13.2 0.1 1.7 2 0 0 2 2 2 0 Protein kinase domain Acyltransferase PF01553.21 ORF3282 - 1.1e-07 31.5 0.0 1.4e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Acyltransferase T2SSB PF16537.5 ORF3282 - 0.023 14.3 0.0 0.045 13.4 0.0 1.4 1 0 0 1 1 1 0 Type II secretion system protein B Staph_haemo PF05480.11 ORF32421 - 0.079 12.7 0.3 1.4 8.8 0.1 2.3 2 0 0 2 2 2 0 Staphylococcus haemolytic protein Fumarate_red_C PF02300.17 ORF32421 - 0.1 12.7 3.2 1.9 8.5 0.7 2.1 2 0 0 2 2 2 0 Fumarate reductase subunit C DUF3124 PF11322.8 ORF31586 - 0.087 13.0 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3124) UMP1 PF05348.11 ORF31293 - 8.1e-11 42.2 1.5 9.5e-11 42.0 1.5 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF31293 - 0.0029 17.3 0.1 0.0033 17.1 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein RuBisCO_large PF00016.20 ORF30844 - 0.17 11.0 0.0 0.23 10.6 0.0 1.1 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, catalytic domain DUF4345 PF14248.6 ORF30556 - 0.052 13.4 4.4 0.18 11.7 2.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4345) DUF2070 PF09843.9 ORF30284 - 1.2 7.3 9.3 1.4 7.1 9.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Glyco_transf_24 PF18404.1 ORF29917 - 8e-15 55.0 1.9 8.8e-15 54.8 1.9 1.0 1 0 0 1 1 1 1 Glucosyltransferase 24 tRNA-synt_1d PF00750.19 ORF29917 - 7.3e-06 25.2 0.6 9.9e-06 24.7 0.6 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) PHD PF00628.29 ORF27886 - 0.065 13.1 1.7 0.11 12.5 1.7 1.4 1 0 0 1 1 1 0 PHD-finger BLOC1_2 PF10046.9 ORF27716 - 0.00016 21.9 9.8 0.00016 21.9 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_TATA_bd PF12325.8 ORF27716 - 0.0046 17.2 10.6 0.27 11.4 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding Spc7 PF08317.11 ORF27716 - 0.013 14.4 8.8 0.016 14.1 8.8 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein GAS PF13851.6 ORF27716 - 0.014 14.7 13.0 0.014 14.7 12.1 1.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF27716 - 0.014 12.9 6.3 0.017 12.6 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Leu_zip PF15294.6 ORF27716 - 0.018 14.5 10.1 0.023 14.2 10.1 1.1 1 0 0 1 1 1 0 Leucine zipper Vps53_N PF04100.12 ORF27716 - 0.024 13.6 6.9 0.041 12.9 6.9 1.5 1 1 0 1 1 1 0 Vps53-like, N-terminal Baculo_PEP_C PF04513.12 ORF27716 - 0.024 14.7 6.6 0.03 14.4 6.6 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 ORF27716 - 0.049 13.7 9.6 0.36 10.9 4.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) PRKG1_interact PF15898.5 ORF27716 - 0.057 14.3 6.4 0.56 11.1 0.5 2.3 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain ZnuA PF01297.17 ORF27716 - 0.06 12.7 1.5 0.079 12.4 1.5 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic DivIC PF04977.15 ORF27716 - 0.096 12.5 9.2 2.2 8.1 1.5 2.5 1 1 1 2 2 2 0 Septum formation initiator CEP63 PF17045.5 ORF27716 - 0.097 12.6 9.8 0.41 10.5 9.8 1.8 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa Tuberin PF03542.16 ORF27716 - 0.098 11.7 2.9 0.1 11.7 2.9 1.0 1 0 0 1 1 1 0 Tuberin ATG16 PF08614.11 ORF27716 - 0.12 12.6 8.6 1.3 9.2 1.4 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) EP400_N PF15790.5 ORF27716 - 0.12 11.2 0.9 0.14 11.0 0.9 1.1 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal TSNAXIP1_N PF15739.5 ORF27716 - 0.13 12.6 0.7 0.13 12.6 0.7 2.3 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus RasGAP_C PF03836.15 ORF27716 - 0.18 11.9 8.5 2.4 8.3 2.8 2.1 1 1 1 2 2 2 0 RasGAP C-terminus Fib_alpha PF08702.10 ORF27716 - 0.21 11.8 11.1 0.6 10.3 10.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Macoilin PF09726.9 ORF27716 - 0.26 9.8 7.5 0.36 9.3 7.5 1.2 1 0 0 1 1 1 0 Macoilin family TMPIT PF07851.13 ORF27716 - 0.26 10.5 6.8 0.15 11.2 4.4 1.5 1 1 0 1 1 1 0 TMPIT-like protein Spc24 PF08286.11 ORF27716 - 0.27 11.5 10.8 0.62 10.3 3.3 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF27716 - 0.37 11.1 10.1 4.7 7.6 1.0 2.2 1 1 1 2 2 2 0 Tup N-terminal UPF0242 PF06785.11 ORF27716 - 0.66 10.1 9.6 0.78 9.8 9.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Csm2_III-A PF03750.13 ORF27716 - 0.76 10.6 5.9 0.54 11.1 1.9 2.0 1 1 1 2 2 2 0 Csm2 Type III-A BPL_N PF09825.9 ORF27716 - 0.81 8.7 4.6 0.91 8.5 4.6 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal FlaC_arch PF05377.11 ORF27716 - 0.95 9.9 13.4 49 4.4 1.0 3.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF5595 PF18077.1 ORF27716 - 1.6 8.9 8.3 1.8 8.7 2.3 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5595) USP8_interact PF08941.10 ORF27716 - 1.7 8.5 8.7 0.31 10.8 0.8 2.0 1 1 1 2 2 2 0 USP8 interacting NPV_P10 PF05531.12 ORF27716 - 3.6 8.1 10.6 4.8 7.7 7.0 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 ORF27716 - 5.6 7.7 10.9 4.3e+02 1.6 10.9 2.2 1 1 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF27716 - 6.3 7.5 8.0 14 6.4 3.1 2.5 1 1 2 3 3 3 0 SlyX DUF1794 PF08768.11 ORF27522 - 2e-10 40.8 0.0 2.2e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1794) ATP-synt_C PF00137.21 ORF27323 - 2.3e-06 27.9 11.7 3.6e-06 27.2 11.7 1.4 1 0 0 1 1 1 1 ATP synthase subunit C DUF3135 PF11333.8 ORF27112 - 0.34 11.2 6.7 2.2 8.6 2.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3135) Peptidase_M24_C PF16188.5 ORF26795 - 0.0062 16.6 2.2 0.011 15.8 0.4 2.1 1 1 1 2 2 2 1 C-terminal region of peptidase_M24 DUF2120 PF09893.9 ORF26795 - 0.036 14.2 1.3 0.055 13.6 1.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) TBCA PF02970.16 ORF26795 - 0.077 13.3 5.2 0.069 13.5 4.0 1.5 1 1 0 1 1 1 0 Tubulin binding cofactor A RPA_interact_M PF14767.6 ORF26795 - 8.3 7.1 12.2 15 6.3 6.6 2.6 1 1 1 2 2 2 0 Replication protein A interacting middle Osmo_CC PF08946.10 ORF25948 - 7.5e-24 83.7 8.1 9.7e-24 83.4 8.1 1.2 1 0 0 1 1 1 1 Osmosensory transporter coiled coil Sugar_tr PF00083.24 ORF25948 - 5e-10 38.8 0.6 5e-10 38.8 0.6 1.3 2 0 0 2 2 2 1 Sugar (and other) transporter DUF1043 PF06295.12 ORF25948 - 0.008 16.2 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1043) CM_2 PF01817.21 ORF25948 - 0.0084 16.4 0.6 0.015 15.6 0.6 1.4 1 0 0 1 1 1 1 Chorismate mutase type II T3SSipB PF16535.5 ORF25948 - 0.013 15.9 0.2 0.017 15.6 0.2 1.1 1 0 0 1 1 1 0 Type III cell invasion protein SipB Prefoldin PF02996.17 ORF25948 - 0.015 15.2 0.7 0.025 14.5 0.7 1.3 1 0 0 1 1 1 0 Prefoldin subunit TssO PF17561.2 ORF25948 - 0.031 14.4 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO MerR-DNA-bind PF09278.11 ORF25948 - 0.045 14.3 1.9 0.15 12.6 1.9 1.8 1 1 0 1 1 1 0 MerR, DNA binding CLZ PF16526.5 ORF25948 - 0.085 13.2 0.1 0.14 12.5 0.1 1.3 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HSBP1 PF06825.12 ORF25948 - 0.11 12.4 0.4 0.18 11.7 0.4 1.4 1 0 0 1 1 1 0 Heat shock factor binding protein 1 VIT1 PF01988.19 ORF25948 - 0.93 9.3 4.1 0.89 9.4 3.5 1.4 1 1 0 1 1 1 0 VIT family DUF2892 PF11127.8 ORF24413 - 0.045 13.8 1.5 0.045 13.8 1.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) DUF4179 PF13786.6 ORF24413 - 1.4 9.5 3.4 29 5.2 3.4 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4179) Histone_H2A_C PF16211.5 ORF23393 - 8.8e-16 57.4 0.1 1.4e-15 56.7 0.1 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 ORF23393 - 5.8e-15 55.8 0.0 6.9e-15 55.6 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF23393 - 8.3e-06 26.0 0.0 1.3e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone IFT20 PF14931.6 ORF20329 - 0.033 14.3 0.3 0.1 12.7 0.2 1.9 1 1 1 2 2 2 0 Intraflagellar transport complex B, subunit 20 HEAT PF02985.22 ORF20329 - 0.042 14.1 0.0 0.15 12.4 0.0 2.0 2 0 0 2 2 2 0 HEAT repeat IZUMO PF15005.6 ORF20329 - 0.056 14.0 0.2 0.071 13.6 0.2 1.1 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DUF2884 PF11101.8 ORF20329 - 0.058 12.9 0.0 0.093 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) TAN PF11640.8 ORF20329 - 0.059 13.5 1.3 5 7.2 0.2 2.1 1 1 1 2 2 2 0 Telomere-length maintenance and DNA damage repair bZIP_1 PF00170.21 ORF19760 - 0.0073 16.4 14.9 0.03 14.4 14.9 2.1 1 1 0 1 1 1 1 bZIP transcription factor DMPK_coil PF08826.10 ORF19760 - 0.021 14.9 3.6 0.045 13.9 3.6 1.6 1 0 0 1 1 1 0 DMPK coiled coil domain like DUF3922 PF13059.6 ORF19760 - 0.024 15.1 0.6 0.035 14.6 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3992) TSC22 PF01166.18 ORF19760 - 0.04 14.2 2.9 0.085 13.2 2.9 1.6 1 0 0 1 1 1 0 TSC-22/dip/bun family CHASE9 PF17153.4 ORF19760 - 0.096 12.8 5.0 0.099 12.8 4.4 1.4 1 1 0 1 1 1 0 Periplasmic sensor domain, extracellular Elongin_A PF06881.11 ORF19760 - 0.15 12.6 7.9 2.5 8.7 5.8 2.1 2 0 0 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A DUF3116 PF11313.8 ORF19176 - 0.018 14.9 0.4 0.033 14.1 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) Ycf1 PF05758.12 ORF19176 - 0.041 11.8 0.4 0.041 11.8 0.4 1.0 1 0 0 1 1 1 0 Ycf1 Ras PF00071.22 ORF19146 - 2e-22 79.5 0.0 2.3e-22 79.4 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF19146 - 9.1e-05 22.7 0.0 0.00013 22.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF19146 - 0.0083 15.6 0.0 0.01 15.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Cpn60_TCP1 PF00118.24 ORF19136 - 4e-34 118.1 0.4 4.3e-34 118.0 0.4 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family ATP-grasp_2 PF08442.10 ORF18683 - 8.9e-24 84.2 0.0 1.1e-23 83.9 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 ORF18683 - 0.097 12.1 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 ATP-grasp domain Ank_4 PF13637.6 ORF17666 - 1.3e-18 67.1 2.2 4.2e-07 30.4 0.0 3.7 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF17666 - 1.6e-18 66.5 0.6 4.2e-09 36.5 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF17666 - 7.6e-18 62.8 0.3 1.2e-05 25.3 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF17666 - 1.4e-17 63.3 0.1 1.2e-06 28.6 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank_2 PF12796.7 ORF17666 - 1.1e-16 61.2 0.1 7.7e-10 39.2 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Myosin_TH1 PF06017.13 ORF17450 - 2.1e-14 53.6 0.5 2.2e-14 53.5 0.5 1.0 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding PH_3 PF14593.6 ORF17450 - 0.0027 17.8 1.8 0.0032 17.5 1.8 1.1 1 0 0 1 1 1 1 PH domain Sec15 PF04091.12 ORF17398 - 5.7e-13 49.0 1.9 6.4e-13 48.8 1.9 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DIL PF01843.19 ORF17398 - 0.016 15.5 0.2 0.028 14.7 0.2 1.5 1 1 0 1 1 1 0 DIL domain HipN PF18253.1 ORF17398 - 0.059 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain COX4 PF02936.14 ORF1659 - 0.17 11.9 0.0 0.17 11.9 0.0 1.7 2 1 0 2 2 2 0 Cytochrome c oxidase subunit IV DUF2556 PF10831.8 ORF1659 - 3.6 7.6 7.8 2.7 8.0 4.8 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2556) ACOX PF01756.19 ORF16010 - 2.2e-24 86.0 1.3 2.4e-24 85.9 1.3 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase DUF5085 PF16895.5 ORF16010 - 0.00015 22.1 0.9 0.00018 21.9 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5085) DUF2290 PF10053.9 ORF1406 - 0.22 11.0 0.5 0.31 10.5 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2290) DUF4081 PF13312.6 ORF1406 - 0.98 9.6 6.3 5 7.4 0.3 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4081) Pur_DNA_glyco PF02245.16 ORF13656 - 0.062 12.7 0.0 0.079 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylpurine-DNA glycosylase (MPG) EamA PF00892.20 ORF1325 - 5.2e-07 29.9 14.6 5.7e-07 29.8 14.6 1.1 1 0 0 1 1 1 1 EamA-like transporter family Ac76 PF05814.11 ORF1241 - 1.2 9.2 9.1 0.39 10.8 2.3 2.5 1 1 0 2 2 2 0 Orf76 (Ac76) Abi_HHR PF07815.14 ORF11855 - 0.0066 16.6 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 Abl-interactor HHR Sec15 PF04091.12 ORF11610 - 5.7e-13 49.0 1.9 6.4e-13 48.8 1.9 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DIL PF01843.19 ORF11610 - 0.016 15.5 0.2 0.028 14.7 0.2 1.5 1 1 0 1 1 1 0 DIL domain HipN PF18253.1 ORF11610 - 0.059 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain HAP2-GCS1 PF10699.9 ORF112249 - 0.019 14.9 0.4 0.038 14.0 0.4 1.5 1 0 0 1 1 1 0 Male gamete fusion factor MFS_1 PF07690.16 ORF112164 - 2.8e-07 29.8 7.4 3.1e-07 29.7 7.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1858 PF08984.11 ORF112164 - 0.14 12.4 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1858) Sugar_tr PF00083.24 ORF112164 - 0.4 9.5 8.9 0.24 10.2 1.3 2.0 1 1 1 2 2 2 0 Sugar (and other) transporter Thioredoxin PF00085.20 ORF112098 - 1.3e-07 31.5 0.1 2.3e-07 30.7 0.1 1.6 1 1 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF112098 - 0.00027 21.4 0.0 0.00038 20.9 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain QSOX_Trx1 PF18108.1 ORF112098 - 0.00096 19.3 0.1 0.0018 18.4 0.1 1.5 1 1 0 1 1 1 1 QSOX Trx-like domain Thioredoxin_8 PF13905.6 ORF112098 - 0.0019 18.5 1.5 0.0026 18.0 0.2 1.9 2 1 0 2 2 2 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF112098 - 0.003 16.9 0.6 0.059 12.7 0.1 2.0 1 1 1 2 2 2 1 OST3 / OST6 family, transporter family HyaE PF07449.11 ORF112098 - 0.0041 17.1 0.0 0.0064 16.4 0.0 1.4 1 1 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Terminase_3C PF17288.2 ORF112098 - 0.022 15.1 1.3 0.029 14.8 1.2 1.3 1 1 0 1 1 1 0 Terminase RNAseH like domain TrbC_Ftype PF09673.10 ORF112098 - 0.096 12.7 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein TPP_enzyme_N PF02776.18 ORF112098 - 0.11 12.1 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABC2_membrane_3 PF12698.7 ORF112098 - 0.53 9.3 2.1 0.58 9.2 2.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Acyl_transf_3 PF01757.22 ORF111806 - 0.062 12.4 8.2 0.071 12.2 8.2 1.1 1 0 0 1 1 1 0 Acyltransferase family DUF3124 PF11322.8 ORF111314 - 0.087 13.0 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3124) Mfa1 PF17445.2 ORF110207 - 0.092 12.8 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Mating factor A1 Ribosomal_L37e PF01907.19 ORF108889 - 0.085 13.0 0.1 1.8 8.8 0.0 2.3 2 0 0 2 2 2 0 Ribosomal protein L37e zf-RING_2 PF13639.6 ORF108529 - 5.3e-11 42.7 6.1 7.8e-11 42.1 6.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF108529 - 2e-09 37.2 7.3 2.9e-09 36.6 7.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF108529 - 6.5e-09 35.5 6.5 9.3e-09 35.0 6.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF108529 - 5.2e-08 32.6 4.5 7.2e-08 32.2 4.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF108529 - 8.2e-08 31.9 4.7 6.4e-07 29.0 2.6 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF108529 - 6.6e-06 26.0 3.6 0.00028 20.8 1.1 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF108529 - 9.8e-06 25.8 7.6 9.1e-05 22.7 7.6 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF108529 - 1.5e-05 25.1 4.0 4.5e-05 23.5 4.3 1.7 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF108529 - 8.3e-05 22.5 6.1 0.00018 21.4 6.1 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF108529 - 0.00029 20.6 3.8 0.00047 20.0 3.8 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Rad50_zn_hook PF04423.14 ORF108529 - 0.0082 16.0 0.1 0.021 14.6 0.1 1.7 1 0 0 1 1 1 1 Rad50 zinc hook motif zf-ANAPC11 PF12861.7 ORF108529 - 0.025 14.6 4.7 0.11 12.5 4.7 2.1 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_4 PF14570.6 ORF108529 - 0.028 14.2 5.6 0.094 12.5 5.6 1.8 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-HC5HC2H PF13771.6 ORF108529 - 0.034 14.4 4.7 0.29 11.4 3.7 2.2 1 1 1 2 2 2 0 PHD-like zinc-binding domain zf-C2HC_2 PF13913.6 ORF108529 - 0.079 12.9 1.2 0.079 12.9 1.2 2.4 2 0 0 2 2 2 0 zinc-finger of a C2HC-type RecR PF02132.15 ORF108529 - 0.75 9.4 5.1 4.4 6.9 0.3 2.3 2 0 0 2 2 2 0 RecR protein Zf_RING PF16744.5 ORF108529 - 0.95 9.6 5.0 8.6 6.6 5.0 2.1 1 1 0 1 1 1 0 KIAA1045 RING finger FANCL_C PF11793.8 ORF108529 - 2.8 8.2 8.2 84 3.5 8.2 2.9 1 1 0 1 1 1 0 FANCL C-terminal domain tRNA-synt_2c PF01411.19 ORF107565 - 1.2e-14 53.8 0.7 1.3e-14 53.7 0.7 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) DUF5566 PF17721.1 ORF107565 - 0.074 13.3 0.0 0.083 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5566) Peptidase_M48 PF01435.18 ORF10663 - 0.00028 20.7 0.0 0.00035 20.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M48 Herpes_capsid PF06112.11 ORF104309 - 0.88 9.6 14.6 1.1 9.3 14.6 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein LRR_8 PF13855.6 ORF104059 - 1.6e-16 59.8 16.3 3.8e-11 42.6 5.2 2.7 1 1 2 3 3 3 3 Leucine rich repeat LRR_4 PF12799.7 ORF104059 - 4.9e-13 49.0 12.6 3e-05 24.3 3.9 3.7 2 1 2 4 4 4 4 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF104059 - 3.4e-06 26.8 10.9 3.3 8.6 0.4 5.6 5 1 0 5 5 5 3 Leucine Rich Repeat LRR_9 PF14580.6 ORF104059 - 0.00051 19.6 0.4 0.0039 16.7 0.5 1.9 1 1 1 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 ORF104059 - 0.021 14.8 13.6 0.36 11.0 0.2 4.7 5 0 0 5 5 5 0 Leucine Rich repeat Pigment_DH PF06324.11 ORF104059 - 0.032 14.3 1.2 10 6.5 0.0 3.7 4 0 0 4 4 4 0 Pigment-dispersing hormone (PDH) NOG1 PF06858.14 ORF104059 - 0.032 14.0 0.2 0.19 11.5 0.1 2.2 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) LRR_5 PF13306.6 ORF104059 - 0.037 14.0 0.6 1 9.3 0.3 2.0 1 1 1 2 2 2 0 BspA type Leucine rich repeat region (6 copies) Aldo_ket_red PF00248.21 ORF103341 - 0.0047 16.2 0.0 0.0062 15.8 0.0 1.3 1 1 0 1 1 1 1 Aldo/keto reductase family Pkinase PF00069.25 ORF103294 - 0.017 14.5 0.3 0.042 13.2 0.1 1.7 2 0 0 2 2 2 0 Protein kinase domain SQS_PSY PF00494.19 ORF102496 - 0.014 14.9 0.0 0.018 14.5 0.0 1.1 1 0 0 1 1 1 0 Squalene/phytoene synthase Ogr_Delta PF04606.12 ORF102496 - 0.087 12.8 0.7 0.14 12.2 0.7 1.3 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger Ribosomal_L37e PF01907.19 ORF102390 - 0.085 13.0 0.1 1.8 8.8 0.0 2.3 2 0 0 2 2 2 0 Ribosomal protein L37e AID PF18767.1 ORF101634 - 0.065 13.2 0.7 0.1 12.6 0.7 1.3 1 0 0 1 1 1 0 Activation induced deaminase Myb_DNA-bind_3 PF12776.7 ORF101585 - 0.17 12.9 0.0 0.24 12.4 0.0 1.2 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain TMEM52 PF14979.6 ORF101488 - 1.4 8.8 3.3 8.7 6.3 1.6 2.1 2 0 0 2 2 2 0 Transmembrane 52 Ribosomal_S11 PF00411.19 ORF100871 - 1.7e-54 182.9 0.8 2.1e-54 182.6 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 Lyase_1 PF00206.20 NODE_49092_length_382_cov_2.334294_g41207_i0reverse_frame_1 - 1.3e-44 152.9 0.4 1.4e-44 152.7 0.4 1.0 1 0 0 1 1 1 1 Lyase ADH_N PF08240.12 NODE_49092_length_382_cov_2.334294_g41207_i0reverse_frame_1 - 0.076 12.9 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain Na_Pi_cotrans PF02690.15 NODE_49090_length_382_cov_2.452450_g41205_i0forward_frame_1 - 0.14 12.3 0.1 0.2 11.7 0.1 1.2 1 0 0 1 1 1 0 Na+/Pi-cotransporter Usp PF00582.26 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.011 16.2 9.0 0.034 14.7 9.0 1.8 1 1 0 1 1 1 0 Universal stress protein family NARP1 PF12569.8 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.46 9.3 16.0 0.53 9.1 16.0 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Raftlin PF15250.6 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.65 8.7 8.6 0.72 8.5 8.6 1.0 1 0 0 1 1 1 0 Raftlin Rtf2 PF04641.12 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.72 9.2 16.2 0.85 8.9 16.2 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger GAGA_bind PF06217.12 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.91 9.8 11.2 1 9.6 11.2 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family MDM10 PF12519.8 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 1.7 7.4 7.4 1.9 7.2 7.4 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 Neur_chan_memb PF02932.16 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 2.1 8.3 5.4 2.4 8.1 5.4 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CDC45 PF02724.14 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 2.6 6.2 11.2 2.9 6.1 11.2 1.0 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 5.5 6.7 14.3 6.8 6.4 14.3 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 UPF0767 PF15990.5 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 6.6 7.0 6.3 1.7 8.8 1.5 2.2 1 1 2 3 3 3 0 UPF0767 family Presenilin PF01080.17 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 8.8 5.0 12.1 9.9 4.8 12.1 1.0 1 0 0 1 1 1 0 Presenilin AP-5_subunit_s1 PF15001.6 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 9.6 6.1 8.6 11 6.0 8.6 1.1 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 TK PF00265.18 NODE_49085_length_382_cov_2.711816_g41200_i0forward_frame_1 - 2.1e-35 122.2 0.1 2.5e-35 121.9 0.1 1.1 1 0 0 1 1 1 1 Thymidine kinase Nop10p PF04135.12 NODE_49076_length_382_cov_4.293948_g41191_i0reverse_frame_1 - 0.12 12.4 1.1 0.12 12.4 1.1 1.9 2 1 1 3 3 3 0 Nucleolar RNA-binding protein, Nop10p family DUF2067 PF09840.9 NODE_49073_length_382_cov_27.965418_g41188_i0reverse_frame_1 - 0.021 14.4 0.8 0.054 13.1 0.1 1.9 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2067) BIRC6 PF12356.8 NODE_49073_length_382_cov_27.965418_g41188_i0reverse_frame_1 - 0.035 13.5 0.7 0.047 13.1 0.7 1.2 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 YacG PF03884.14 NODE_49053_length_382_cov_73.579251_g41168_i0reverse_frame_1 - 0.011 15.5 3.0 0.068 12.9 0.3 2.5 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG YqgF PF14639.6 NODE_49050_length_382_cov_77.867435_g41166_i0reverse_frame_1 - 0.072 12.9 0.1 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 Holliday-junction resolvase-like of SPT6 Auto_anti-p27 PF06677.12 NODE_49042_length_382_cov_122.697406_g41158_i0reverse_frame_1 - 0.009 16.2 0.8 0.021 15.0 0.8 1.6 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TPR_MLP1_2 PF07926.12 NODE_49035_length_382_cov_173.054755_g41151_i0forward_frame_1 - 0.41 10.7 6.1 0.36 10.9 3.3 2.1 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein APG6_N PF17675.1 NODE_49035_length_382_cov_173.054755_g41151_i0forward_frame_1 - 0.53 10.8 5.0 3.4 8.2 5.0 2.0 1 1 0 1 1 1 0 Apg6 coiled-coil region Viral_P18 PF04521.13 NODE_49035_length_382_cov_173.054755_g41151_i0forward_frame_1 - 0.66 9.8 3.8 0.62 9.8 0.4 2.2 2 1 0 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein T6PP_N PF18572.1 NODE_49032_length_382_cov_267.481268_g41148_i0reverse_frame_1 - 4.5 7.2 8.9 0.96 9.3 3.8 2.0 1 1 1 2 2 2 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain DUF1889 PF08986.10 NODE_49023_length_382_cov_10817.475504_g41139_i0forward_frame_1 - 0.21 12.0 0.0 0.28 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) DUF1889 PF08986.10 NODE_49022_length_382_cov_10817.538905_g41138_i0forward_frame_1 - 0.21 12.0 0.0 0.28 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) ubiquitin PF00240.23 NODE_49021_length_382_cov_11042.780980_g41137_i0forward_frame_1 - 5e-19 67.8 0.6 8.2e-19 67.1 0.6 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_49021_length_382_cov_11042.780980_g41137_i0forward_frame_1 - 1e-10 41.2 0.2 1.6e-10 40.6 0.2 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 NODE_49021_length_382_cov_11042.780980_g41137_i0forward_frame_1 - 0.00046 20.5 0.3 0.00046 20.5 0.3 1.6 2 1 0 2 2 2 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 NODE_49021_length_382_cov_11042.780980_g41137_i0forward_frame_1 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 NODE_49021_length_382_cov_11042.780980_g41137_i0forward_frame_1 - 0.041 14.4 0.1 0.062 13.9 0.1 1.3 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Ubiquitin_2 PF14560.6 NODE_49021_length_382_cov_11042.780980_g41137_i0forward_frame_1 - 0.06 13.8 1.2 0.27 11.7 0.4 2.3 2 1 0 2 2 2 0 Ubiquitin-like domain zf-met PF12874.7 NODE_49020_length_382_cov_15710.435159_g41136_i0forward_frame_1 - 0.34 11.4 2.1 12 6.5 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Pkinase PF00069.25 NODE_49016_length_383_cov_1.591954_g41132_i0reverse_frame_1 - 0.0035 16.8 0.5 0.0035 16.8 0.5 1.7 2 0 0 2 2 2 1 Protein kinase domain GAGA PF09237.11 NODE_49014_length_383_cov_1.695402_g41130_i0reverse_frame_1 - 0.00039 20.2 0.0 0.00092 19.0 0.0 1.7 1 0 0 1 1 1 1 GAGA factor Tctex-1 PF03645.13 NODE_49014_length_383_cov_1.695402_g41130_i0reverse_frame_1 - 0.052 13.8 1.2 0.058 13.6 1.2 1.3 1 1 0 1 1 1 0 Tctex-1 family DUF167 PF02594.16 NODE_49011_length_383_cov_1.974138_g41127_i0reverse_frame_1 - 0.03 14.4 0.0 0.044 13.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised ACR, YggU family COG1872 YkuD_2 PF13645.6 NODE_49002_length_383_cov_2.477011_g41118_i0reverse_frame_1 - 0.12 11.8 0.2 0.16 11.4 0.2 1.2 1 0 0 1 1 1 0 L,D-transpeptidase catalytic domain SH3_3 PF08239.11 NODE_48999_length_383_cov_2.597701_g41115_i0forward_frame_1 - 1.5e-09 38.0 0.2 2.6e-09 37.2 0.2 1.4 1 0 0 1 1 1 1 Bacterial SH3 domain DUF948 PF06103.11 NODE_48999_length_383_cov_2.597701_g41115_i0forward_frame_1 - 0.0044 17.2 1.9 0.0063 16.7 0.8 1.7 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF948) ADIP PF11559.8 NODE_48999_length_383_cov_2.597701_g41115_i0forward_frame_1 - 0.0058 16.7 0.6 0.0077 16.3 0.6 1.3 1 1 0 1 1 1 1 Afadin- and alpha -actinin-Binding SH3_4 PF06347.13 NODE_48999_length_383_cov_2.597701_g41115_i0forward_frame_1 - 0.013 15.3 0.0 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial SH3 domain FlxA PF14282.6 NODE_48999_length_383_cov_2.597701_g41115_i0forward_frame_1 - 0.015 15.2 1.5 0.026 14.5 1.5 1.4 1 0 0 1 1 1 0 FlxA-like protein TPR_MLP1_2 PF07926.12 NODE_48999_length_383_cov_2.597701_g41115_i0forward_frame_1 - 0.019 15.1 1.2 0.034 14.2 1.2 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Prefoldin_2 PF01920.20 NODE_48999_length_383_cov_2.597701_g41115_i0forward_frame_1 - 0.06 13.3 0.6 0.13 12.3 0.1 1.7 2 1 0 2 2 2 0 Prefoldin subunit Noelin-1 PF12308.8 NODE_48999_length_383_cov_2.597701_g41115_i0forward_frame_1 - 0.064 13.2 0.3 0.087 12.8 0.3 1.2 1 0 0 1 1 1 0 Neurogenesis glycoprotein CLZ PF16526.5 NODE_48999_length_383_cov_2.597701_g41115_i0forward_frame_1 - 0.088 13.2 0.2 0.15 12.4 0.2 1.4 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels UvrD_C PF13361.6 NODE_48998_length_383_cov_2.669540_g41114_i0reverse_frame_1 - 3.5e-08 33.2 0.0 4.1e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 NODE_48998_length_383_cov_2.669540_g41114_i0reverse_frame_1 - 0.00013 21.7 0.0 0.00024 20.9 0.0 1.5 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain DUF2663 PF10864.8 NODE_48997_length_383_cov_2.692529_g41113_i0reverse_frame_1 - 0.37 11.2 6.2 0.36 11.2 5.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2663) DUF1129 PF06570.11 NODE_48997_length_383_cov_2.692529_g41113_i0forward_frame_1 - 0.95 8.9 6.7 0.68 9.4 4.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) Toxin_11 PF07473.11 NODE_48996_length_383_cov_2.738506_g41112_i0forward_frame_1 - 0.33 11.1 4.8 0.61 10.2 4.8 1.4 1 0 0 1 1 1 0 Spasmodic peptide gm9a; conotoxin from Conus species YjcZ PF13990.6 NODE_48995_length_383_cov_2.795977_g41111_i0forward_frame_1 - 0.15 11.4 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 YjcZ-like protein DNA_methylase PF00145.17 NODE_48982_length_383_cov_7.649425_g41098_i0reverse_frame_1 - 0.0024 17.3 0.0 0.003 17.0 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase GCP5-Mod21 PF14609.6 NODE_48975_length_383_cov_60.750000_g41091_i0reverse_frame_1 - 0.00057 18.4 0.2 0.00068 18.1 0.2 1.0 1 0 0 1 1 1 1 gamma-Tubulin ring complex non-core subunit mod21 Pox_MCEL PF03291.16 NODE_48968_length_383_cov_71.827586_g41084_i0reverse_frame_1 - 2.2e-11 43.5 4.7 2.8e-11 43.1 4.7 1.1 1 0 0 1 1 1 1 mRNA capping enzyme Keratin_B2_2 PF13885.6 NODE_48961_length_383_cov_85.787356_g41077_i0forward_frame_1 - 0.67 9.9 10.2 3 7.9 10.2 2.0 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Vitelline_membr PF10542.9 NODE_48955_length_383_cov_97.410920_g41071_i0forward_frame_1 - 0.13 12.1 3.1 0.25 11.3 3.1 1.4 1 0 0 1 1 1 0 Vitelline membrane cysteine-rich region DUF5543 PF17697.1 NODE_48947_length_383_cov_134.626437_g41063_i0reverse_frame_1 - 0.085 13.1 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5543) DUF5516 PF17637.2 NODE_48946_length_383_cov_138.091954_g41062_i0reverse_frame_1 - 0.22 11.3 2.4 0.73 9.6 2.4 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5516) Chordopox_L2 PF05803.12 NODE_48945_length_383_cov_142.051724_g41061_i0forward_frame_1 - 0.12 12.2 8.6 0.22 11.4 8.6 1.5 1 0 0 1 1 1 0 Chordopoxvirus L2 protein YpmT PF17431.2 NODE_48945_length_383_cov_142.051724_g41061_i0forward_frame_1 - 0.14 12.2 0.3 0.14 12.2 0.3 2.9 2 1 0 2 2 2 0 Uncharacterized YmpT-like Mpv17_PMP22 PF04117.12 NODE_48942_length_383_cov_207.382184_g41058_i0reverse_frame_1 - 1.1e-13 51.2 1.1 1.6e-13 50.6 1.1 1.3 1 0 0 1 1 1 1 Mpv17 / PMP22 family Poly_export PF02563.16 NODE_48942_length_383_cov_207.382184_g41058_i0reverse_frame_1 - 0.11 12.7 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis/export protein Lamprin PF06403.11 NODE_48939_length_383_cov_230.660920_g41055_i0forward_frame_1 - 0.63 10.0 30.8 1.4 8.9 19.7 3.2 1 1 1 2 2 2 0 Lamprin NDUF_B7 PF05676.13 NODE_48934_length_383_cov_1371.206897_g41051_i0forward_frame_1 - 0.012 15.3 0.1 0.03 14.0 0.0 1.7 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) DUF4746 PF15928.5 NODE_48932_length_383_cov_3621.537356_g41049_i0reverse_frame_1 - 0.05 13.0 9.5 0.053 12.9 9.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) RNA_pol_3_Rpc31 PF11705.8 NODE_48932_length_383_cov_3621.537356_g41049_i0reverse_frame_1 - 0.13 12.4 11.5 0.15 12.3 11.5 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 NOA36 PF06524.12 NODE_48932_length_383_cov_3621.537356_g41049_i0reverse_frame_1 - 6.2 6.0 9.4 7.3 5.8 9.4 1.1 1 0 0 1 1 1 0 NOA36 protein RNA_pol_N PF01194.17 NODE_48929_length_384_cov_1.375358_g41046_i0forward_frame_1 - 0.089 13.1 7.7 0.074 13.4 1.5 2.8 2 1 0 2 2 2 0 RNA polymerases N / 8 kDa subunit GAGA PF09237.11 NODE_48923_length_384_cov_2.117479_g41040_i0reverse_frame_1 - 0.13 12.0 0.4 0.25 11.2 0.4 1.5 1 0 0 1 1 1 0 GAGA factor 4HBT PF03061.22 NODE_48917_length_384_cov_3.234957_g41034_i0reverse_frame_1 - 4.6e-17 62.1 1.3 5.9e-17 61.8 0.8 1.4 2 0 0 2 2 2 1 Thioesterase superfamily 4HBT_2 PF13279.6 NODE_48917_length_384_cov_3.234957_g41034_i0reverse_frame_1 - 3.6e-08 33.9 0.9 4.4e-08 33.6 0.9 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 NODE_48917_length_384_cov_3.234957_g41034_i0reverse_frame_1 - 0.014 14.7 0.0 0.017 14.4 0.0 1.1 1 0 0 1 1 1 0 Acyl-ACP thioesterase bZIP_1 PF00170.21 NODE_48903_length_384_cov_6.495702_g41020_i0reverse_frame_1 - 5.4e-05 23.2 15.2 0.00015 21.8 15.2 1.8 1 1 0 1 1 1 1 bZIP transcription factor UPF0242 PF06785.11 NODE_48903_length_384_cov_6.495702_g41020_i0reverse_frame_1 - 0.2 11.7 8.0 0.24 11.5 8.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3287 PF11690.8 NODE_48903_length_384_cov_6.495702_g41020_i0reverse_frame_1 - 0.21 11.3 6.2 0.36 10.6 6.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3287) DUF5592 PF17332.2 NODE_48903_length_384_cov_6.495702_g41020_i0forward_frame_1 - 0.37 11.4 14.3 0.12 12.9 6.7 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5592) VirB7 PF17413.2 NODE_48897_length_384_cov_49.681948_g41015_i0reverse_frame_1 - 0.076 12.4 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein virB7 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks179.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks179.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks179.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks179.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- p450 PF00067.22 ORF89606 - 4.4e-75 253.2 0.0 5.8e-75 252.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 STOP PF05217.12 ORF89606 - 4.2 7.7 8.2 8.6 6.8 8.2 1.5 1 0 0 1 1 1 0 STOP protein TPR_10 PF13374.6 ORF89233 - 2.4e-59 195.7 24.0 1.4e-09 37.5 0.2 10.2 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_12 PF13424.6 ORF89233 - 9.7e-57 189.2 26.4 6.7e-15 55.2 0.9 7.0 3 2 4 8 8 8 8 Tetratricopeptide repeat TPR_2 PF07719.17 ORF89233 - 6.6e-21 72.7 17.3 0.0077 16.3 0.3 10.1 10 0 0 10 10 10 5 Tetratricopeptide repeat TPR_14 PF13428.6 ORF89233 - 5.1e-20 70.5 22.3 0.019 15.8 0.1 9.8 8 2 2 10 10 10 6 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF89233 - 1.5e-19 70.5 15.4 4e-17 62.6 9.9 3.1 1 1 2 3 3 3 2 MalT-like TPR region TPR_8 PF13181.6 ORF89233 - 1.1e-18 65.8 4.6 0.0026 17.8 0.0 8.4 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF89233 - 6.1e-16 58.7 18.8 0.0031 18.0 0.7 7.6 5 1 2 7 7 7 4 Tetratricopeptide repeat TPR_4 PF07721.14 ORF89233 - 1e-14 53.5 17.2 0.025 15.2 0.2 8.8 9 0 0 9 9 8 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF89233 - 4.1e-13 48.6 15.5 0.16 11.9 0.2 9.6 10 0 0 10 10 10 5 Tetratricopeptide repeat TPR_7 PF13176.6 ORF89233 - 5.2e-11 41.8 18.5 0.022 14.8 0.1 7.9 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_17 PF13431.6 ORF89233 - 1.4e-06 28.2 8.6 11 6.7 0.0 7.6 9 0 0 9 9 7 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF89233 - 1.7e-06 28.6 15.3 30 5.3 0.1 8.3 7 1 1 8 8 7 0 Tetratricopeptide repeat TPR_5 PF12688.7 ORF89233 - 5.1e-05 23.5 13.1 0.019 15.2 0.6 4.7 2 1 4 6 6 6 2 Tetratrico peptide repeat ANAPC3 PF12895.7 ORF89233 - 0.00026 21.2 14.4 7.4 6.9 0.4 6.9 3 1 2 6 6 6 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_20 PF14561.6 ORF89233 - 0.0024 18.1 8.5 2.1 8.7 0.3 5.3 4 2 2 6 6 6 3 Tetratricopeptide repeat Daxx PF03344.15 ORF89233 - 0.048 13.7 2.2 9.4 6.4 0.1 4.0 4 0 0 4 4 4 0 Daxx N-terminal Rassf1C-interacting domain APG6 PF04111.12 ORF89233 - 0.085 12.8 1.4 23 4.9 0.0 3.4 3 1 0 3 3 3 0 Apg6 BARA domain TPR_6 PF13174.6 ORF89233 - 0.17 12.6 12.1 15 6.5 0.0 7.1 8 0 0 8 8 7 0 Tetratricopeptide repeat PrmC_N PF17827.1 ORF89233 - 1.1 9.9 11.3 44 4.8 0.2 6.1 6 1 0 6 6 5 0 PrmC N-terminal domain YkyA PF10368.9 ORF83173 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF83173 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF83173 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor Ion_trans PF00520.31 ORF7810 - 4.4e-13 49.0 8.6 7.9e-13 48.2 8.6 1.4 1 0 0 1 1 1 1 Ion transport protein cNMP_binding PF00027.29 ORF7810 - 0.00092 19.2 0.0 0.002 18.2 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Lig_chan PF00060.26 ORF7810 - 0.005 16.7 2.7 0.021 14.7 2.0 2.2 2 0 0 2 2 2 1 Ligand-gated ion channel MnhB PF04039.13 ORF7810 - 0.048 14.0 0.4 0.18 12.1 0.3 2.0 2 0 0 2 2 2 0 Domain related to MnhB subunit of Na+/H+ antiporter YkyA PF10368.9 ORF74399 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF74399 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF74399 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor PFK PF00365.20 ORF7106 - 6.3e-06 25.7 0.1 1.2e-05 24.8 0.1 1.5 2 0 0 2 2 2 1 Phosphofructokinase FAD_binding_4 PF01565.23 ORF69830 - 1e-34 119.2 1.5 1.9e-34 118.4 1.5 1.4 1 0 0 1 1 1 1 FAD binding domain FAD-oxidase_C PF02913.19 ORF69830 - 7.3e-19 68.4 0.1 2.7e-18 66.5 0.1 2.1 1 1 0 1 1 1 1 FAD linked oxidases, C-terminal domain Cytokin-bind PF09265.10 ORF69830 - 0.059 12.8 0.0 0.09 12.2 0.0 1.3 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding DUF21 PF01595.20 ORF64110 - 3.3e-26 92.1 0.6 5.4e-26 91.4 0.6 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain YrhC PF14143.6 ORF64110 - 0.02 15.0 2.5 0.045 13.8 2.5 1.5 1 0 0 1 1 1 0 YrhC-like protein CBS PF00571.28 ORF64110 - 0.098 13.1 0.4 21 5.6 0.1 3.0 2 1 0 2 2 2 0 CBS domain ABC2_membrane PF01061.24 ORF64110 - 1.7 8.0 6.7 2.5 7.4 6.7 1.2 1 0 0 1 1 1 0 ABC-2 type transporter Peptidase_M16_C PF05193.21 ORF63021 - 7.6e-19 68.4 0.0 1.9e-18 67.1 0.0 1.7 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 ORF63021 - 2.8e-06 27.4 0.0 8e-06 25.9 0.0 1.8 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Ank_2 PF12796.7 ORF50398 - 1e-24 86.9 0.0 5.3e-14 52.6 0.0 3.3 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF50398 - 5.4e-24 84.2 0.7 2.2e-09 37.6 0.0 4.4 2 2 3 5 5 5 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF50398 - 5e-21 74.5 0.5 0.00015 22.0 0.0 5.6 3 1 2 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF50398 - 3.6e-16 57.6 2.1 0.0076 16.7 0.0 6.3 7 0 0 7 7 7 4 Ankyrin repeat Ank PF00023.30 ORF50398 - 2.8e-13 49.7 3.5 0.0086 16.5 0.0 5.9 6 0 0 6 6 6 3 Ankyrin repeat SURNod19 PF07712.12 ORF48557 - 2.2e-19 69.5 4.2 7.3e-15 54.6 2.0 2.8 2 1 0 2 2 2 2 Stress up-regulated Nod 19 YkyA PF10368.9 ORF46989 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF46989 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF46989 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF46677 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF46677 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF46677 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor Ion_trans PF00520.31 ORF42157 - 5.5e-19 68.4 18.5 8e-19 67.8 18.5 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF42157 - 0.097 12.3 0.1 0.38 10.4 0.1 2.1 1 0 0 1 1 1 0 EF hand YkyA PF10368.9 ORF41198 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF41198 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF41198 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF38413 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF38413 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF38413 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF38333 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF38333 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF38333 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF38052 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF38052 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF38052 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor Pkinase PF00069.25 ORF37390 - 2e-41 142.1 0.0 3.2e-41 141.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF37390 - 6.2e-26 91.2 1.2 7.2e-26 91.0 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF37390 - 5.5e-10 39.0 0.0 8.2e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF37390 - 3.9e-05 22.6 2.2 5.5e-05 22.1 0.0 1.9 2 0 0 2 2 2 1 Fungal protein kinase Ammonium_transp PF00909.21 ORF31238 - 2.9e-43 148.1 3.6 3.9e-43 147.7 3.6 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family RNA_pol_Rpc4 PF05132.14 ORF31238 - 2.4e-20 73.5 0.2 5e-18 66.0 0.2 2.4 1 1 0 1 1 1 1 RNA polymerase III RPC4 YkyA PF10368.9 ORF30855 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF30855 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF30855 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF18798 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF18798 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF18798 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF18471 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF18471 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF18471 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor GST_N_3 PF13417.6 ORF11793 - 1.8e-22 79.5 0.0 2e-11 44.1 0.0 2.7 3 0 0 3 3 3 2 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF11793 - 2.8e-16 59.6 0.0 3.8e-08 33.5 0.0 2.6 2 0 0 2 2 2 2 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF11793 - 3.2e-13 49.8 0.0 6.7e-06 26.4 0.0 2.6 2 0 0 2 2 2 2 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF11793 - 1.2e-11 44.5 0.3 1.9e-05 24.6 0.0 2.9 3 0 0 3 3 3 2 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF11793 - 1.8e-06 28.1 0.3 0.00085 19.5 0.3 2.6 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF11793 - 3.2e-06 27.3 0.0 0.025 14.8 0.0 3.1 3 0 0 3 3 3 2 Glutaredoxin Arm-DNA-bind_4 PF14657.6 ORF11793 - 0.031 14.0 0.6 1.4 8.7 0.0 2.6 2 0 0 2 2 2 0 Arm DNA-binding domain YkyA PF10368.9 ORF101150 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF101150 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF101150 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor zf-C6H2 PF15801.5 NODE_8683_length_1451_cov_82.818503_g6382_i0reverse_frame_3 - 0.047 14.0 1.6 0.11 12.8 1.6 1.6 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding PMP1_2 PF08114.11 NODE_8683_length_1451_cov_82.818503_g6382_i0forward_frame_3 - 5.4 6.8 7.4 11 5.8 0.5 2.4 2 0 0 2 2 2 0 ATPase proteolipid family VWA_CoxE PF05762.14 ORF9780 - 7.6e-11 41.8 0.1 1.8e-10 40.6 0.0 1.6 2 0 0 2 2 2 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 ORF9780 - 3e-07 31.1 0.0 9.9e-07 29.4 0.0 1.9 2 0 0 2 2 2 1 von Willebrand factor type A domain DUF2201 PF09967.9 ORF9780 - 0.023 14.8 0.0 0.045 13.9 0.0 1.5 1 0 0 1 1 1 0 VWA-like domain (DUF2201) VWA PF00092.28 ORF9780 - 0.093 13.0 0.0 0.22 11.7 0.0 1.6 2 0 0 2 2 2 0 von Willebrand factor type A domain Glyco_transf_5 PF08323.11 ORF97058 - 4.5e-45 154.3 0.0 8.6e-45 153.3 0.0 1.5 2 0 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 ORF97058 - 8.4e-14 51.5 0.0 1.3e-13 50.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF97058 - 6e-10 39.7 0.0 1e-09 38.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 dsRBD2 PF17842.1 ORF93449 - 0.048 13.9 0.4 0.71 10.1 0.2 2.5 2 1 0 2 2 2 0 Double-stranded RNA binding domain 2 Peptidase_S28 PF05577.12 ORF91131 - 6.5e-76 255.9 5.2 4.3e-75 253.2 5.2 1.9 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF91131 - 0.0029 17.1 0.7 0.0059 16.1 0.1 1.8 2 0 0 2 2 2 1 Prolyl oligopeptidase family DUF3139 PF11337.8 ORF77851 - 0.039 14.6 0.8 0.27 11.9 0.6 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) SpoIIM PF01944.17 ORF77851 - 0.076 13.1 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Stage II sporulation protein M Pox_LP_H2 PF03356.15 ORF77851 - 0.1 12.4 0.7 0.2 11.5 0.7 1.4 1 0 0 1 1 1 0 Viral late protein H2 LPAM_1 PF08139.12 ORF66755 - 0.1 13.1 1.0 0.14 12.7 1.0 1.2 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site PTS_EIIC PF02378.18 ORF65178 - 5.1e-28 98.0 32.7 5.1e-28 98.0 32.7 1.5 1 1 0 1 1 1 1 Phosphotransferase system, EIIC PTS_IIB PF02302.17 ORF65178 - 4.4e-18 65.8 0.1 7.8e-18 65.0 0.1 1.4 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DAO PF01266.24 ORF65178 - 0.11 12.1 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase ThrE PF06738.12 ORF65178 - 9.1 5.6 20.1 1.3 8.3 3.1 3.3 2 1 1 3 3 3 0 Putative threonine/serine exporter Fez1 PF06818.15 ORF56644 - 0.0045 17.5 7.5 0.0045 17.5 7.5 3.5 1 1 2 3 3 3 2 Fez1 SKA1 PF07160.12 ORF56644 - 0.02 14.8 12.9 0.2 11.5 3.5 2.6 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 Bap31_Bap29_C PF18035.1 ORF56644 - 2.2 8.4 9.4 0.95 9.5 1.6 3.6 3 0 0 3 3 3 0 Bap31/Bap29 cytoplasmic coiled-coil domain HALZ PF02183.18 ORF56644 - 7.9 6.8 16.1 3.5 7.9 0.8 4.3 3 1 1 4 4 4 0 Homeobox associated leucine zipper Trypsin_2 PF13365.6 ORF48400 - 1e-29 104.4 0.1 2.5e-29 103.1 0.0 1.7 2 0 0 2 2 2 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 ORF48400 - 7.6e-13 48.6 0.0 1.6e-12 47.5 0.0 1.6 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 ORF48400 - 2.3e-11 43.9 0.0 1.2e-10 41.6 0.0 2.0 1 1 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 ORF48400 - 1.8e-08 34.1 1.4 6.7e-05 22.7 0.2 2.6 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF48400 - 0.00024 21.4 0.6 0.0045 17.3 0.6 2.9 2 1 0 2 2 2 1 PDZ domain Tricorn_PDZ PF14685.6 ORF48400 - 0.04 13.9 0.0 0.086 12.8 0.0 1.5 1 0 0 1 1 1 0 Tricorn protease PDZ domain Peptidase_S46 PF10459.9 ORF48400 - 0.074 11.7 0.1 0.12 11.0 0.1 1.2 1 0 0 1 1 1 0 Peptidase S46 PDZ_4 PF17816.1 ORF48400 - 0.089 13.2 0.2 1 9.8 0.2 2.4 1 1 0 1 1 1 0 PDZ domain Med25_NR-box PF11244.8 ORF48400 - 0.19 12.1 3.2 0.57 10.6 1.3 2.3 1 1 1 2 2 2 0 Mediator complex subunit 25 C-terminal NR box-containing BORCS8 PF10167.9 ORF48400 - 0.19 11.7 0.0 0.39 10.7 0.0 1.4 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 8 RimK PF08443.11 ORF372 - 0.0065 16.1 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.6 ORF372 - 0.063 12.9 0.0 6.9 6.2 0.0 2.3 1 1 1 2 2 2 0 ATP-grasp domain MFS_1 PF07690.16 ORF20947 - 2.5e-14 53.0 31.6 2.5e-14 53.0 31.6 1.8 1 1 0 1 1 1 1 Major Facilitator Superfamily UPF0542 PF15086.6 ORF20947 - 0.12 12.3 0.6 3.3 7.7 0.1 2.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0542 DUF5337 PF17272.2 ORF20947 - 0.38 10.6 0.1 0.38 10.6 0.1 2.8 3 1 0 3 3 3 0 Family of unknown function (DUF5337) Sec16_C PF12931.7 ORF19243 - 0.0013 18.5 0.1 0.005 16.5 0.0 2.0 2 0 0 2 2 2 1 Sec23-binding domain of Sec16 Guanylin PF02058.15 ORF19243 - 0.033 14.6 1.0 0.66 10.5 0.1 2.9 3 0 0 3 3 3 0 Guanylin precursor TPR_12 PF13424.6 ORF18744 - 5.6e-20 71.4 30.2 3.8e-07 30.3 6.2 5.0 3 2 2 5 5 5 5 Tetratricopeptide repeat PP-binding PF00550.25 ORF18744 - 9.1e-09 35.6 0.2 1.9e-08 34.5 0.2 1.6 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_2 PF07719.17 ORF18744 - 6.7e-06 25.8 28.7 1.1 9.5 1.1 8.6 8 1 0 8 8 8 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF18744 - 1.4e-05 24.7 22.7 0.0022 17.4 13.7 2.1 2 0 0 2 2 2 2 MalT-like TPR region ANAPC3 PF12895.7 ORF18744 - 0.00011 22.4 16.0 0.13 12.5 0.4 5.1 3 3 0 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 ORF18744 - 0.00084 19.8 26.9 0.66 10.5 3.7 5.5 4 1 2 6 6 5 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF18744 - 0.0015 19.2 31.2 6.1 8.0 0.0 7.5 6 1 1 7 7 7 2 Tetratricopeptide repeat PPR PF01535.20 ORF18744 - 0.0021 18.1 1.1 24 5.4 0.0 5.2 5 0 0 5 5 4 0 PPR repeat DUF627 PF04781.12 ORF18744 - 0.0064 16.5 9.4 3.4 7.7 0.3 4.4 4 0 0 4 4 4 1 Protein of unknown function (DUF627) TPR_16 PF13432.6 ORF18744 - 0.01 16.4 22.1 0.88 10.3 0.0 5.9 3 1 3 6 6 6 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF18744 - 0.017 15.1 19.2 7 6.9 0.1 7.1 7 0 0 7 7 7 0 Tetratricopeptide repeat TMEM72 PF16054.5 ORF18744 - 0.1 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 Transmembrane protein family 72 RPN7 PF10602.9 ORF18744 - 0.16 11.7 3.5 0.68 9.6 0.1 3.2 2 2 2 4 4 4 0 26S proteasome subunit RPN7 PPR_2 PF13041.6 ORF18744 - 0.23 11.7 0.6 72 3.7 0.0 3.8 3 0 0 3 3 3 0 PPR repeat family TPR_10 PF13374.6 ORF18744 - 2.4 8.1 23.4 7 6.7 0.0 6.7 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF18744 - 4.6 7.9 7.7 20 5.9 0.1 4.7 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF18744 - 7.8 7.0 26.1 8.3 6.9 0.1 7.4 8 1 0 8 8 8 0 Tetratricopeptide repeat TrkH PF02386.16 ORF108356 - 3.5e-93 312.8 16.1 5.6e-93 312.1 16.1 1.3 1 0 0 1 1 1 1 Cation transport protein Serpentine_r_xa PF03383.15 ORF108356 - 0.01 15.8 1.6 0.026 14.5 0.6 2.2 2 0 0 2 2 2 0 Caenorhabditis serpentine receptor-like protein, class xa 60KD_IMP PF02096.20 ORF104778 - 7.5e-13 48.7 0.6 1.2e-12 48.0 0.6 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein Ank_5 PF13857.6 ORF104778 - 2e-12 47.1 0.4 2.6e-08 34.0 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF104778 - 8.9e-07 29.3 0.1 0.00017 22.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF104778 - 2.5e-06 28.0 0.0 7.3e-06 26.5 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF104778 - 0.00085 19.6 0.0 0.056 14.0 0.0 3.3 3 0 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF104778 - 0.0086 16.5 0.0 0.29 11.7 0.0 2.8 3 0 0 3 3 3 1 Ankyrin repeat DUF842 PF05811.13 ORF104778 - 0.034 13.8 1.0 0.05 13.3 1.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) SAGA-Tad1 PF12767.7 ORF104778 - 0.15 11.8 3.9 0.25 11.0 3.9 1.3 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit ASH PF15780.5 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 3.7e-15 55.9 1.1 0.00016 21.8 0.0 4.2 4 0 0 4 4 4 3 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF1573 PF07610.11 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 4e-06 26.8 0.6 6 7.0 0.0 4.7 4 2 0 4 4 4 3 Protein of unknown function (DUF1573) Motile_Sperm PF00635.26 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 8.5e-06 25.6 2.1 0.0016 18.3 0.1 3.6 3 1 0 3 3 3 1 MSP (Major sperm protein) domain MYCBPAP PF14646.6 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.0068 15.4 1.1 0.084 11.8 0.1 2.8 2 1 0 3 3 3 1 MYCBP-associated protein family FixG_C PF11614.8 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.051 13.8 0.4 1 9.6 0.0 2.5 2 1 1 3 3 3 0 IG-like fold at C-terminal of FixG, putative oxidoreductase Peptidase_C23 PF05379.11 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.052 13.7 0.1 1.3 9.2 0.1 2.9 3 1 1 4 4 4 0 Carlavirus endopeptidase TMEM131_like PF12371.8 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.052 13.8 0.1 68 3.8 0.0 3.4 3 0 0 3 3 3 0 Transmembrane protein 131-like TonB_N PF16031.5 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.16 12.5 6.9 0.45 11.0 6.9 1.8 1 0 0 1 1 1 0 TonB polyproline region HTH_19 PF12844.7 NODE_8729_length_1448_cov_301.892427_g6415_i0reverse_frame_2 - 0.37 10.9 4.5 1.1 9.4 0.8 2.9 2 1 0 2 2 2 0 Helix-turn-helix domain Apolipoprotein PF01442.18 ORF94465 - 5.9e-06 26.3 0.0 1.1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain Penicil_amidase PF01804.18 ORF81461 - 1.9e-86 291.5 0.0 2.1e-86 291.4 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase PG_binding_2 PF08823.11 ORF81461 - 0.13 12.6 0.0 6.5 7.1 0.0 2.5 2 0 0 2 2 2 0 Putative peptidoglycan binding domain Ligase_CoA PF00549.19 ORF77551 - 1.3e-55 187.4 0.0 6.9e-55 185.1 0.0 2.1 2 0 0 2 2 2 1 CoA-ligase CoA_binding PF02629.19 ORF77551 - 1.5e-13 51.3 0.6 5.5e-12 46.2 0.1 2.4 2 0 0 2 2 2 1 CoA binding domain Succ_CoA_lig PF13607.6 ORF77551 - 0.0073 16.1 0.0 0.021 14.6 0.0 1.8 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain BPD_transp_1 PF00528.22 ORF73167 - 1.2 8.8 10.4 6.7 6.4 1.6 2.7 2 0 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component PriA_C PF18074.1 ORF72391 - 1.6e-17 64.1 0.1 2.3e-16 60.4 0.0 2.9 3 1 0 3 3 3 1 Primosomal protein N C-terminal domain Helicase_C PF00271.31 ORF72391 - 1.8e-09 37.9 0.0 8.4e-06 26.1 0.0 2.6 3 0 0 3 3 2 2 Helicase conserved C-terminal domain PriA_CRR PF18319.1 ORF72391 - 8.2e-08 32.1 17.8 8.2e-08 32.1 17.8 3.0 3 0 0 3 3 3 1 PriA DNA helicase Cys-rich region (CRR) domain DEAD PF00270.29 ORF72391 - 5.7e-07 29.5 0.0 1.9e-06 27.8 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase zinc-ribbons_6 PF07191.12 ORF72391 - 0.0019 18.2 4.7 0.0042 17.0 4.7 1.5 1 0 0 1 1 1 1 zinc-ribbons ResIII PF04851.15 ORF72391 - 0.042 13.9 0.0 0.069 13.1 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit zinc_ribbon_12 PF11331.8 ORF72391 - 0.23 11.3 1.5 0.61 9.9 1.5 1.8 1 0 0 1 1 1 0 Probable zinc-ribbon domain zinc_ribbon_5 PF13719.6 ORF72391 - 0.37 10.6 3.0 5.6 6.8 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF72391 - 0.84 9.7 13.4 5 7.2 6.3 2.8 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-NADH-PPase PF09297.11 ORF72391 - 1.9 8.2 15.9 5.6 6.7 0.5 3.5 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain HypA PF01155.19 ORF72391 - 6.2 6.9 10.2 83 3.3 10.2 2.2 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ThiI PF02568.14 ORF56059 - 8.8e-82 273.5 0.0 1.3e-81 272.9 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 ORF56059 - 1.2e-28 100.0 0.4 1.2e-28 100.0 0.4 1.9 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 ORF56059 - 0.00061 19.3 0.3 0.27 10.7 0.0 3.3 2 1 1 3 3 3 2 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 ORF56059 - 0.0008 19.0 0.2 0.0082 15.7 0.0 2.5 2 1 0 3 3 3 1 Diphthamide synthase tRNA_Me_trans PF03054.16 ORF56059 - 0.027 13.3 0.0 0.12 11.2 0.0 2.1 2 0 0 2 2 2 0 tRNA methyl transferase NAD_synthase PF02540.17 ORF56059 - 0.2 10.8 0.9 1.4 8.0 0.1 2.2 2 0 0 2 2 2 0 NAD synthase Apolipoprotein PF01442.18 ORF48541 - 5.9e-06 26.3 0.0 1.1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF4816 PF16086.5 ORF20418 - 0.024 14.5 1.6 0.024 14.5 1.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4816) Ion_trans PF00520.31 ORF18786 - 4.8e-18 65.3 19.8 7.9e-18 64.6 19.8 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_8 PF13833.6 ORF18786 - 4e-07 29.8 0.2 9e-06 25.4 0.1 2.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF18786 - 1.4e-06 28.7 0.1 4.3e-06 27.1 0.0 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF18786 - 1.2e-05 24.5 0.3 9.6e-05 21.7 0.0 2.5 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF18786 - 4.4e-05 23.1 0.0 0.00023 20.8 0.0 2.3 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF18786 - 0.0071 15.8 0.0 0.0071 15.8 0.0 2.4 3 0 0 3 3 3 1 EF hand S10_plectin PF03501.15 ORF18786 - 0.098 12.7 0.2 0.57 10.3 0.1 2.2 2 0 0 2 2 2 0 Plectin/S10 domain EF-hand_4 PF12763.7 ORF108540 - 0.43 10.5 8.5 0.87 9.6 1.3 3.3 3 1 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand Sugar_tr PF00083.24 ORF79227 - 0.003 16.5 0.6 0.0059 15.5 0.6 1.4 1 0 0 1 1 1 1 Sugar (and other) transporter C2 PF00168.30 ORF7520 - 1.4e-14 54.2 0.0 1e-12 48.2 0.0 2.2 2 0 0 2 2 2 2 C2 domain SMP_LBD PF17047.5 ORF7520 - 0.068 12.6 0.0 0.1 12.1 0.0 1.3 1 0 0 1 1 1 0 Synaptotagmin-like mitochondrial-lipid-binding domain Vasohibin PF14822.6 ORF73613 - 0.001 18.4 0.1 0.0016 17.7 0.1 1.2 1 0 0 1 1 1 1 Vasohibin Pkinase PF00069.25 ORF67178 - 1e-59 202.0 0.2 1.9e-59 201.2 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67178 - 5.2e-30 104.6 0.1 1.9e-29 102.8 0.0 1.9 3 0 0 3 3 3 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF67178 - 0.0004 19.3 0.8 0.0009 18.1 0.0 1.9 3 0 0 3 3 3 1 Fungal protein kinase Kdo PF06293.14 ORF67178 - 0.00041 19.8 0.1 0.00076 18.9 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF67178 - 0.0013 18.7 0.0 0.0046 16.9 0.0 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF67178 - 0.015 14.6 0.0 0.032 13.5 0.0 1.5 2 0 0 2 2 2 0 Kinase-like RelB_N PF18506.1 ORF67178 - 0.022 14.6 0.6 0.077 12.8 0.6 2.0 1 0 0 1 1 1 0 RelB Antitoxin alpha helical domain Hypoth_Ymh PF09509.10 ORF67178 - 0.044 13.7 0.9 11 6.0 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (Hypoth_ymh) FTA2 PF13095.6 ORF67178 - 0.07 12.8 0.0 0.23 11.1 0.0 1.8 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 MMR_HSR1 PF01926.23 ORF62188 - 9.7e-10 38.5 0.0 3.8e-08 33.4 0.0 2.5 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF62188 - 1.2e-08 34.8 0.0 0.00023 20.8 0.0 2.5 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF62188 - 3.3e-06 27.1 0.0 7e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase ATP_bind_1 PF03029.17 ORF62188 - 0.00044 20.1 0.2 0.12 12.1 0.0 2.4 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 ORF62188 - 0.0066 16.5 0.0 0.34 11.0 0.0 2.5 2 0 0 2 2 2 1 Dynamin family PucR PF07905.11 ORF62188 - 0.0071 16.6 0.0 0.15 12.4 0.0 2.6 3 0 0 3 3 3 1 Purine catabolism regulatory protein-like family FeoB_N PF02421.18 ORF62188 - 0.025 14.1 0.1 7.3 6.1 0.0 2.8 2 1 0 2 2 2 0 Ferrous iron transport protein B G-alpha PF00503.20 ORF62188 - 0.099 11.8 0.0 7.7 5.6 0.0 2.1 1 1 1 2 2 2 0 G-protein alpha subunit Spore_IV_A PF09547.10 ORF62188 - 0.17 10.8 0.0 0.31 9.9 0.0 1.3 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) LRR_6 PF13516.6 ORF57930 - 0.00045 20.0 4.5 41 4.6 0.1 6.3 5 1 0 5 5 5 1 Leucine Rich repeat LRR_8 PF13855.6 ORF57930 - 2.6 7.9 9.1 4.4 7.1 0.3 4.5 5 1 0 5 5 5 0 Leucine rich repeat Ion_trans PF00520.31 ORF32619 - 3.7e-11 42.7 18.7 5.3e-11 42.2 18.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF32619 - 0.00098 18.5 0.0 0.0031 16.9 0.0 2.0 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF32619 - 0.025 14.5 0.0 0.11 12.5 0.0 2.2 1 0 0 1 1 1 0 EF-hand domain EF-hand_5 PF13202.6 ORF32619 - 0.073 12.6 0.0 0.24 11.0 0.0 1.9 1 0 0 1 1 1 0 EF hand SecY PF00344.20 ORF31441 - 1.2e-61 208.6 14.1 1.6e-61 208.2 14.1 1.2 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 ORF31441 - 3.2e-16 58.9 0.1 1.1e-15 57.2 0.1 2.0 1 0 0 1 1 1 1 Plug domain of Sec61p Sugar_tr PF00083.24 ORF30957 - 0.003 16.5 0.6 0.0059 15.5 0.6 1.4 1 0 0 1 1 1 1 Sugar (and other) transporter Pkinase PF00069.25 ORF29817 - 8.2e-50 169.6 0.0 1.2e-49 169.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29817 - 3.9e-25 88.6 0.0 5.5e-25 88.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF29817 - 7.9e-10 39.0 1.7 0.00029 21.2 0.3 2.9 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF29817 - 1.7e-09 36.9 0.3 0.0065 16.3 0.0 3.7 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF29817 - 3.2e-09 36.5 1.5 0.011 15.6 0.2 4.6 1 1 3 4 4 4 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF29817 - 5.5e-06 25.6 0.1 0.057 13.0 0.1 3.8 3 0 0 3 3 3 1 EF hand Pkinase_fungal PF17667.1 ORF29817 - 2.5e-05 23.3 0.0 3.9e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF29817 - 4.1e-05 23.1 0.0 0.00011 21.6 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF29817 - 0.0036 16.7 0.0 0.008 15.6 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF29817 - 0.13 12.2 0.0 0.28 11.1 0.0 1.6 1 0 0 1 1 1 0 Phosphotransferase enzyme family Mic1 PF07035.12 ORF2716 - 1.1e-13 51.2 1.4 2.1e-13 50.3 1.4 1.4 1 0 0 1 1 1 1 Colon cancer-associated protein Mic1-like PARP PF00644.20 ORF15295 - 6.5e-08 32.4 0.0 3.5e-07 30.0 0.0 2.0 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Oxidored_molyb PF00174.19 ORF108534 - 6.7e-37 126.7 0.0 1.7e-36 125.5 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 ORF108534 - 1.2e-18 67.5 0.1 2.3e-18 66.6 0.1 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain Cyt-b5 PF00173.28 ORF108534 - 0.029 14.5 0.1 0.081 13.1 0.0 1.8 2 0 0 2 2 2 0 Cytochrome b5-like Heme/Steroid binding domain Laminin_G_3 PF13385.6 ORF84928 - 3.4e-06 27.3 0.3 8.2e-06 26.0 0.3 1.6 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily WD40 PF00400.32 ORF82251 - 1.7e-41 139.4 12.1 1e-07 32.5 0.1 7.9 8 0 0 8 8 8 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF82251 - 0.00019 21.6 0.2 0.52 10.6 0.0 4.9 2 1 6 8 8 8 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF82251 - 0.00041 19.1 0.7 5 5.6 0.1 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF82251 - 0.0015 17.4 0.0 1 8.1 0.0 3.7 2 1 2 4 4 4 1 Nup133 N terminal like RRM_2 PF04059.12 ORF80077 - 6e-20 71.3 0.0 9.3e-20 70.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 Wtap PF17098.5 ORF80077 - 0.009 16.0 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 WTAP/Mum2p family RRM_1 PF00076.22 ORF80077 - 0.03 14.2 0.0 0.056 13.3 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TSC22 PF01166.18 ORF80077 - 0.056 13.8 0.1 0.1 12.9 0.1 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family DUF1195 PF06708.11 ORF7355 - 0.0034 17.1 0.0 0.009 15.8 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) PARP PF00644.20 ORF64548 - 3.8e-05 23.4 0.0 6.7e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Rtt106 PF08512.12 ORF60526 - 8.6e-23 80.6 0.1 1.7e-22 79.6 0.1 1.5 1 0 0 1 1 1 1 Histone chaperone Rttp106-like SSrecog PF03531.14 ORF60526 - 2.8e-17 62.4 0.0 1.3e-16 60.2 0.0 2.3 2 0 0 2 2 2 1 Structure-specific recognition protein (SSRP1) Carm_PH PF17888.1 ORF60526 - 0.15 12.5 0.3 2.5 8.5 0.3 2.6 2 0 0 2 2 2 0 Carmil pleckstrin homology domain BUD22 PF09073.10 ORF60526 - 0.7 9.2 31.8 0.29 10.4 16.6 2.2 2 0 0 2 2 2 0 BUD22 C2 PF00168.30 ORF413 - 3.3e-26 91.6 0.0 1.4e-16 60.6 0.0 4.3 3 1 1 4 4 4 4 C2 domain Peptidase_M20 PF01546.28 ORF3705 - 5.1e-17 62.3 0.0 6.5e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF3705 - 1.5e-07 31.3 0.0 2.8e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain WD40 PF00400.32 ORF36469 - 1.7e-41 139.4 12.1 1e-07 32.5 0.1 7.9 8 0 0 8 8 8 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF36469 - 0.00019 21.6 0.2 0.52 10.6 0.0 4.9 2 1 6 8 8 8 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF36469 - 0.00041 19.1 0.7 5 5.6 0.1 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF36469 - 0.0015 17.4 0.0 1 8.1 0.0 3.7 2 1 2 4 4 4 1 Nup133 N terminal like S1 PF00575.23 ORF29150 - 2.4e-31 107.9 4.8 2.7e-14 53.3 0.1 4.3 4 1 0 4 4 4 2 S1 RNA binding domain SAP PF02037.27 ORF29150 - 1.7e-13 50.0 1.0 2.8e-13 49.3 1.0 1.4 1 0 0 1 1 1 1 SAP domain DUF4537 PF15057.6 ORF29150 - 1.9e-10 40.8 0.9 0.00038 20.5 0.0 3.2 2 1 0 2 2 2 2 Domain of unknown function (DUF4537) DUF1325 PF07039.11 ORF29150 - 1.7e-08 34.6 0.3 0.0011 19.1 0.0 3.2 1 1 2 3 3 3 2 SGF29 tudor-like domain Agenet PF05641.12 ORF29150 - 1.2e-07 32.0 2.3 0.0011 19.4 0.2 3.6 3 0 0 3 3 3 1 Agenet domain TUDOR PF00567.24 ORF29150 - 2.3e-07 30.9 0.1 0.024 14.7 0.0 3.2 1 1 2 3 3 3 3 Tudor domain S1_2 PF13509.6 ORF29150 - 8.2e-06 25.8 2.4 1.6 8.8 0.0 5.2 4 2 1 5 5 5 1 S1 domain SMN PF06003.12 ORF29150 - 0.00033 20.0 2.0 0.55 9.5 0.1 3.0 1 1 2 3 3 3 2 Survival motor neuron protein (SMN) Tudor_2 PF18104.1 ORF29150 - 0.0022 17.7 0.8 0.088 12.5 0.0 3.2 3 0 0 3 3 3 1 Jumonji domain-containing protein 2A Tudor domain 53-BP1_Tudor PF09038.10 ORF29150 - 0.0047 16.9 0.1 15 5.5 0.0 3.2 3 0 0 3 3 3 0 Tumour suppressor p53-binding protein-1 Tudor Phage_gp53 PF11246.8 ORF29150 - 0.0059 16.3 0.4 0.039 13.6 0.1 2.0 1 1 1 2 2 2 1 Base plate wedge protein 53 Telomere_Sde2_2 PF13297.6 ORF29150 - 0.029 14.0 0.7 0.073 12.7 0.7 1.6 1 0 0 1 1 1 0 Telomere stability C-terminal PASTA PF03793.19 ORF29150 - 0.11 12.4 1.0 20 5.2 0.0 3.4 3 0 0 3 3 3 0 PASTA domain HeH PF12949.7 ORF29150 - 0.14 11.9 1.1 0.33 10.7 0.3 2.0 2 0 0 2 2 2 0 HeH/LEM domain DUF3221 PF11518.8 ORF29150 - 0.98 9.8 9.8 6.1 7.3 0.0 4.4 4 1 1 5 5 5 0 Protein of unknown function (DUF3221) LBR_tudor PF09465.10 ORF29150 - 1.2 8.9 5.4 2.1 8.2 0.5 3.0 2 1 1 3 3 3 0 Lamin-B receptor of TUDOR domain Peptidase_M20 PF01546.28 ORF27245 - 5.1e-17 62.3 0.0 6.5e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF27245 - 1.5e-07 31.3 0.0 2.8e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Cation_efflux PF01545.21 ORF25764 - 1.7e-31 109.5 40.9 4.1e-31 108.3 40.9 1.6 1 1 0 1 1 1 1 Cation efflux family TIP120 PF08623.10 ORF25764 - 0.041 13.7 0.2 0.076 12.8 0.2 1.4 1 0 0 1 1 1 0 TATA-binding protein interacting (TIP20) DUF1700 PF08006.11 ORF25764 - 0.094 12.2 1.3 0.25 10.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) WD40 PF00400.32 ORF24720 - 1.7e-41 139.4 12.1 1e-07 32.5 0.1 7.9 8 0 0 8 8 8 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF24720 - 0.00019 21.6 0.2 0.52 10.6 0.0 4.9 2 1 6 8 8 8 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF24720 - 0.00041 19.1 0.7 5 5.6 0.1 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF24720 - 0.0015 17.4 0.0 1 8.1 0.0 3.7 2 1 2 4 4 4 1 Nup133 N terminal like SET PF00856.28 ORF18964 - 2e-07 31.5 0.0 6.3e-07 29.9 0.0 1.8 2 0 0 2 2 2 1 SET domain PPR PF01535.20 ORF154 - 7.1e-06 25.9 1.6 0.014 15.6 0.1 3.7 4 0 0 4 4 4 2 PPR repeat PDZ PF00595.24 ORF154 - 9.6e-06 25.9 0.0 1.7e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PPR_2 PF13041.6 ORF154 - 2.4e-05 24.5 0.0 0.00043 20.4 0.0 2.5 1 1 1 2 2 2 1 PPR repeat family PDZ_6 PF17820.1 ORF154 - 0.0026 17.6 0.0 0.0052 16.6 0.0 1.5 1 0 0 1 1 1 1 PDZ domain PPR_3 PF13812.6 ORF154 - 0.0045 17.0 0.0 0.015 15.4 0.0 1.9 2 0 0 2 2 2 1 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF154 - 0.013 14.8 0.0 0.024 14.0 0.0 1.4 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Glucokinase PF02685.16 ORF154 - 0.061 12.3 0.2 0.094 11.7 0.2 1.2 1 0 0 1 1 1 0 Glucokinase TPR_14 PF13428.6 ORF154 - 0.25 12.2 3.4 11 7.2 0.5 3.1 1 1 1 2 2 2 0 Tetratricopeptide repeat MCPsignal PF00015.21 ORF105299 - 5.7e-61 205.3 36.1 1.5e-60 203.9 18.2 3.4 4 0 0 4 4 3 2 Methyl-accepting chemotaxis protein (MCP) signalling domain TarH PF02203.15 ORF105299 - 1e-16 61.4 4.3 1e-16 61.4 4.3 4.3 5 0 0 5 5 5 1 Tar ligand binding domain homologue HAMP PF00672.25 ORF105299 - 1.1e-09 38.5 7.2 3.3e-09 37.0 0.5 4.0 4 0 0 4 4 3 1 HAMP domain YscO PF07321.12 ORF105299 - 0.0051 16.8 16.6 0.0081 16.1 1.1 3.5 4 0 0 4 4 4 2 Type III secretion protein YscO Mod_r PF07200.13 ORF105299 - 0.039 14.1 5.2 0.1 12.7 0.2 3.0 3 0 0 3 3 3 0 Modifier of rudimentary (Mod(r)) protein BCDHK_Adom3 PF10436.9 ORF105299 - 0.067 13.0 0.0 0.26 11.1 0.0 2.2 2 1 0 2 2 2 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase Mo25 PF08569.11 ORF105299 - 0.13 11.6 0.5 0.27 10.6 0.4 1.7 1 1 0 1 1 1 0 Mo25-like Prominin PF05478.11 ORF105299 - 0.15 10.0 8.3 0.027 12.5 0.9 2.9 2 1 1 3 3 3 0 Prominin Snf7 PF03357.21 ORF105299 - 0.16 11.6 8.1 0.039 13.5 2.3 2.6 2 1 0 2 2 2 0 Snf7 Glycophorin_A PF01102.18 ORF105299 - 0.16 12.2 2.8 0.82 9.9 0.1 2.6 2 0 0 2 2 2 0 Glycophorin A FlgN PF05130.12 ORF105299 - 0.2 12.1 12.4 1.4 9.4 0.2 4.0 4 1 0 4 4 4 0 FlgN protein V_ATPase_I PF01496.19 ORF105299 - 1.4 6.7 4.8 6.3 4.6 4.9 2.0 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Serine_rich PF08824.10 ORF105299 - 1.7 8.6 10.1 0.77 9.7 1.3 3.3 3 1 1 4 4 4 0 Serine rich protein interaction domain DUF4200 PF13863.6 ORF105299 - 1.8 8.9 4.9 1.7 9.1 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4200) NACHT_N PF17100.5 ORF105299 - 3.5 7.4 13.1 1.4 8.8 1.1 2.7 1 1 0 2 2 2 0 N-terminal domain of NWD NACHT-NTPase Snapin_Pallidin PF14712.6 ORF105299 - 3.6 8.1 7.9 0.4 11.1 1.1 2.9 3 1 0 3 3 2 0 Snapin/Pallidin FAM184 PF15665.5 ORF105299 - 5.1 6.8 9.0 21 4.8 6.7 3.0 3 1 0 3 3 3 0 Family with sequence similarity 184, A and B Sec20 PF03908.13 ORF105299 - 5.2 7.1 16.1 7.9 6.5 0.2 4.6 3 2 1 4 4 4 0 Sec20 Synaptobrevin PF00957.21 ORF105299 - 5.8 6.8 18.2 0.16 11.8 0.3 4.6 5 0 0 5 5 5 0 Synaptobrevin Hydrolase PF00702.26 ORF10519 - 9.9e-39 133.8 4.3 1.4e-38 133.3 4.3 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF10519 - 2.1e-05 24.4 1.2 0.00011 22.1 0.3 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF10519 - 5.7e-05 23.6 0.2 0.00028 21.3 0.2 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 ORF10519 - 0.00016 21.2 5.2 0.00016 21.2 5.2 2.5 2 1 0 2 2 2 1 E1-E2 ATPase Transgly PF00912.22 NODE_8927_length_1438_cov_4.399857_g6547_i0forward_frame_2 - 7.3e-55 185.2 0.0 1.2e-54 184.5 0.0 1.3 1 0 0 1 1 1 1 Transglycosylase Transpeptidase PF00905.22 NODE_8927_length_1438_cov_4.399857_g6547_i0forward_frame_2 - 1.9e-16 60.1 0.0 8e-16 58.1 0.0 1.9 1 1 0 1 1 1 1 Penicillin binding protein transpeptidase domain Thioredoxin PF00085.20 ORF97885 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF97885 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF97885 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF97885 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF97885 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF97885 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF97885 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF97885 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF97885 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF97885 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF97885 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF97885 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin OmpA PF00691.20 ORF94348 - 0.0026 18.1 0.1 0.013 15.9 0.0 2.2 2 0 0 2 2 2 1 OmpA family DUF1664 PF07889.12 ORF94348 - 0.0076 16.3 13.4 0.0083 16.2 4.2 3.7 1 1 3 4 4 4 1 Protein of unknown function (DUF1664) DUF2730 PF10805.8 ORF94348 - 0.74 9.9 4.0 0.66 10.1 0.1 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2730) Fib_alpha PF08702.10 ORF94348 - 1.7 8.8 14.0 1.3 9.2 6.3 3.2 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family PP-binding PF00550.25 ORF91795 - 1e-13 51.4 0.1 2.3e-13 50.3 0.1 1.6 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_12 PF13424.6 ORF91795 - 3.6e-12 46.4 23.8 0.0023 18.2 3.5 5.4 3 2 2 6 6 6 5 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF91795 - 5.8e-08 32.5 13.2 5.8e-08 32.5 13.2 1.9 1 1 1 2 2 2 1 MalT-like TPR region SNAP PF14938.6 ORF91795 - 6.9e-08 32.2 4.6 6.9e-08 32.2 4.6 2.9 3 0 0 3 3 3 2 Soluble NSF attachment protein, SNAP TPR_14 PF13428.6 ORF91795 - 0.00059 20.4 18.1 27 6.0 0.1 7.6 4 3 3 7 7 7 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF91795 - 0.002 17.9 12.9 0.62 10.0 0.3 5.4 5 1 0 6 6 6 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF91795 - 0.0026 17.7 14.3 9.5 6.6 0.2 6.5 7 0 0 7 7 7 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF91795 - 0.0035 17.5 4.6 1.7 8.9 0.2 3.9 3 1 1 4 4 4 1 Anaphase-promoting complex, cyclosome, subunit 3 ANAPC5 PF12862.7 ORF91795 - 0.0066 16.5 12.3 5.4 7.2 0.0 5.2 3 2 1 4 4 4 1 Anaphase-promoting complex subunit 5 DUF5446 PF17522.2 ORF91795 - 0.083 13.1 0.5 0.5 10.6 0.8 2.2 2 0 0 2 2 1 0 Family of unknown function (DUF5446) TPR_19 PF14559.6 ORF91795 - 0.2 12.2 19.4 0.36 11.4 1.7 4.5 3 2 1 4 4 4 0 Tetratricopeptide repeat DUF4515 PF14988.6 ORF91795 - 0.34 10.7 7.3 0.59 9.9 7.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4515) TPR_8 PF13181.6 ORF91795 - 1.1 9.6 11.1 12 6.4 0.0 5.7 7 0 0 7 7 6 0 Tetratricopeptide repeat ACOX PF01756.19 ORF83822 - 3.9e-12 46.1 0.1 9.1e-12 44.9 0.0 1.6 2 0 0 2 2 2 1 Acyl-CoA oxidase Acyl-CoA_dh_M PF02770.19 ORF83822 - 4.7e-05 23.5 0.0 8.3e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 ORF83822 - 0.0041 17.3 0.0 0.011 16.0 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Myb_DNA-binding PF00249.31 ORF83782 - 4.5e-17 62.0 15.6 0.0004 20.5 0.2 5.4 5 0 0 5 5 5 4 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF83782 - 2.1e-14 53.5 13.6 1.3e-07 31.7 2.4 5.0 2 2 3 5 5 5 4 Myb-like DNA-binding domain Myb_DNA-bind_2 PF08914.11 ORF83782 - 0.0061 16.7 1.9 0.091 12.9 0.0 3.2 3 0 0 3 3 3 1 Rap1 Myb domain Myb_DNA-bind_4 PF13837.6 ORF83782 - 0.075 13.4 9.7 0.87 10.0 2.5 4.2 3 1 1 4 4 4 0 Myb/SANT-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF83782 - 1.3 9.0 8.9 4.8 7.1 0.0 4.1 5 0 0 5 5 5 0 Myb DNA-binding like RicinB_lectin_2 PF14200.6 ORF74587 - 1e-05 26.1 0.1 0.088 13.5 0.0 4.0 2 1 0 3 3 3 1 Ricin-type beta-trefoil lectin domain-like DUF1840 PF08895.11 ORF74587 - 0.068 13.5 0.3 12 6.3 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF1840) AMP-binding PF00501.28 ORF72296 - 2.2e-61 207.7 0.0 2.7e-61 207.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Thioredoxin PF00085.20 ORF67724 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF67724 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF67724 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF67724 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF67724 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF67724 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF67724 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF67724 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF67724 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF67724 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF67724 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF67724 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin Alpha-amylase_C PF02806.18 ORF61710 - 1.2e-18 67.4 0.2 2.5e-18 66.3 0.2 1.6 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 ORF61710 - 1.3e-11 44.7 4.7 2.5e-09 37.2 1.4 2.5 1 1 1 2 2 2 2 Alpha amylase, catalytic domain DUF4309 PF14172.6 ORF61710 - 0.011 15.8 0.4 0.069 13.2 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4309) Baculo_PEP_C PF04513.12 ORF58776 - 0.00014 21.9 7.7 0.058 13.4 0.4 3.4 1 1 2 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus DUF948 PF06103.11 ORF58776 - 0.00019 21.6 13.4 0.61 10.4 0.3 4.2 3 1 1 4 4 4 3 Bacterial protein of unknown function (DUF948) BCAS2 PF05700.11 ORF58776 - 0.0015 18.3 0.5 0.0015 18.3 0.5 3.8 2 1 0 2 2 2 1 Breast carcinoma amplified sequence 2 (BCAS2) Fib_alpha PF08702.10 ORF58776 - 0.016 15.4 16.2 0.43 10.8 2.6 3.2 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 ORF58776 - 0.018 13.9 35.3 0.16 10.8 14.6 2.6 1 1 2 3 3 3 0 Spc7 kinetochore protein Borrelia_lipo_1 PF05714.11 ORF58776 - 0.042 13.6 3.5 2.1 8.1 0.1 3.3 2 1 1 3 3 3 0 Borrelia burgdorferi virulent strain associated lipoprotein PqqD PF05402.12 ORF58776 - 0.048 14.0 3.2 6.3 7.2 0.0 4.1 3 2 0 3 3 3 0 Coenzyme PQQ synthesis protein D (PqqD) HMMR_N PF15905.5 ORF58776 - 0.075 12.5 32.4 0.021 14.3 8.1 2.3 1 1 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF3447 PF11929.8 ORF58776 - 0.22 11.5 0.0 0.43 10.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3447) ApoLp-III PF07464.11 ORF58776 - 0.37 10.9 21.3 5.1 7.2 1.3 3.1 2 1 1 3 3 3 0 Apolipophorin-III precursor (apoLp-III) Sec34 PF04136.15 ORF58776 - 0.66 9.8 12.1 7.2 6.5 0.4 3.7 2 1 2 4 4 4 0 Sec34-like family DUF1664 PF07889.12 ORF58776 - 1.8 8.7 16.6 4.1 7.5 2.0 3.6 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Nre_C PF04895.12 ORF58776 - 1.8 8.5 10.8 0.4 10.6 1.0 3.5 2 1 1 3 3 3 0 Archaeal Nre, C-terminal DASH_Duo1 PF08651.10 ORF58776 - 3.3 7.5 6.0 6.8 6.5 1.3 3.4 2 1 1 3 3 3 0 DASH complex subunit Duo1 Tweety PF04906.13 ORF58776 - 5.9 5.4 12.0 1.1 7.9 0.8 2.8 2 1 1 3 3 3 0 Tweety DUF29 PF01724.16 ORF58776 - 8.1 6.7 14.0 0.12 12.7 2.0 2.8 2 1 1 3 3 3 0 Domain of unknown function DUF29 Baculo_F PF12259.8 ORF58776 - 8.5 4.8 7.6 0.6 8.6 1.6 1.8 1 1 1 2 2 2 0 Baculovirus F protein Thioredoxin PF00085.20 ORF56522 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF56522 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF56522 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF56522 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF56522 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF56522 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF56522 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF56522 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF56522 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF56522 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF56522 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF56522 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin Thioredoxin PF00085.20 ORF55359 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF55359 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF55359 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF55359 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF55359 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF55359 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF55359 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF55359 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF55359 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF55359 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF55359 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF55359 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin Thioredoxin PF00085.20 ORF45952 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF45952 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF45952 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF45952 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF45952 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF45952 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF45952 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF45952 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF45952 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF45952 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF45952 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF45952 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin Peptidase_M48_N PF16491.5 ORF4370 - 1e-49 168.9 16.7 1e-49 168.9 16.7 1.8 2 0 0 2 2 2 1 CAAX prenyl protease N-terminal, five membrane helices Peptidase_M48 PF01435.18 ORF4370 - 2.1e-40 138.6 0.0 3.1e-40 138.1 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 ORF4370 - 0.00082 18.6 2.0 0.0024 17.1 2.0 1.8 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF2268 PF10026.9 ORF4370 - 0.028 14.0 0.0 0.054 13.1 0.0 1.4 1 0 0 1 1 1 0 Predicted Zn-dependent protease (DUF2268) DUF2973 PF11189.8 ORF4370 - 2.2 8.4 6.9 5.5 7.1 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2973) BTB PF00651.31 ORF36008 - 1.2e-15 57.7 0.0 2.6e-15 56.6 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain Syntaxin PF00804.25 ORF31991 - 0.073 12.7 0.0 0.42 10.2 0.0 2.0 2 0 0 2 2 2 0 Syntaxin MMR_HSR1 PF01926.23 ORF30708 - 6.1e-21 74.6 0.0 1.3e-20 73.6 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 ORF30708 - 2.7e-19 69.5 5.9 2.7e-19 69.5 5.9 1.9 2 0 0 2 2 1 1 GTP-binding GTPase Middle Region GTP-bdg_N PF13167.6 ORF30708 - 1.3e-18 67.4 0.0 6.1e-18 65.3 0.0 2.2 2 0 0 2 2 1 1 GTP-binding GTPase N-terminal Gtr1_RagA PF04670.12 ORF30708 - 6.3e-06 25.7 0.0 1e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF30708 - 0.00017 21.2 0.0 0.2 11.2 0.0 2.4 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 ORF30708 - 0.00095 19.3 0.2 0.17 12.0 0.0 2.4 1 1 1 2 2 2 1 Dynamin family RsgA_GTPase PF03193.16 ORF30708 - 0.0011 19.0 0.1 0.021 14.7 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase Arf PF00025.21 ORF30708 - 0.0025 17.3 0.1 0.044 13.2 0.1 2.2 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 ORF30708 - 0.0039 17.2 0.0 0.0076 16.2 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain AAA_23 PF13476.6 ORF30708 - 0.0056 17.2 0.0 0.013 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 ORF30708 - 0.0058 16.2 0.4 2.8 7.5 0.1 2.6 1 1 1 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 ORF30708 - 0.007 16.8 0.1 0.023 15.1 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain FeoB_N PF02421.18 ORF30708 - 0.0083 15.7 0.1 0.037 13.6 0.1 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B ABC_ATPase PF09818.9 ORF30708 - 0.013 14.4 0.0 0.021 13.6 0.0 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class ABC_tran PF00005.27 ORF30708 - 0.019 15.5 0.0 0.044 14.3 0.0 1.7 1 0 0 1 1 1 0 ABC transporter ATP_bind_1 PF03029.17 ORF30708 - 0.026 14.3 0.0 6.3 6.5 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF30708 - 0.091 13.0 0.0 0.69 10.2 0.0 2.5 2 1 1 3 3 3 0 AAA domain AAA_33 PF13671.6 ORF30708 - 0.1 12.8 0.0 6.2 7.0 0.0 2.7 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 ORF30708 - 0.1 12.8 0.2 7.4 6.8 0.0 2.6 3 0 0 3 3 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_29 PF13555.6 ORF30708 - 0.12 12.2 0.0 0.36 10.6 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain RCC1_2 PF13540.6 ORF24651 - 3e-25 87.4 15.1 0.012 15.4 0.9 9.4 9 0 0 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF24651 - 5.8e-06 26.5 5.3 1.5 8.9 0.1 6.9 4 2 2 7 7 7 2 Uncharacterised ACR, YagE family COG1723 Ago_hook PF10427.9 ORF24651 - 0.036 14.6 6.2 0.26 11.8 1.9 3.1 2 2 0 2 2 2 0 Argonaute hook Capsule_synth PF05159.14 ORF24651 - 0.073 12.5 0.2 15 4.9 0.0 3.6 4 0 0 4 4 4 0 Capsule polysaccharide biosynthesis protein DUF1150 PF06620.11 ORF24651 - 0.14 12.3 0.1 1.3e+02 2.8 0.0 4.1 4 0 0 4 4 4 0 Protein of unknown function (DUF1150) Thioredoxin PF00085.20 ORF23391 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF23391 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF23391 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF23391 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF23391 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF23391 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF23391 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF23391 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF23391 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF23391 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF23391 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF23391 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin Thioredoxin PF00085.20 ORF23382 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF23382 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF23382 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF23382 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF23382 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF23382 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF23382 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF23382 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF23382 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF23382 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF23382 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF23382 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin Baculo_PEP_C PF04513.12 ORF19803 - 0.00014 21.9 7.7 0.058 13.4 0.4 3.4 1 1 2 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus DUF948 PF06103.11 ORF19803 - 0.00019 21.6 13.4 0.61 10.4 0.3 4.2 3 1 1 4 4 4 3 Bacterial protein of unknown function (DUF948) BCAS2 PF05700.11 ORF19803 - 0.0015 18.3 0.5 0.0015 18.3 0.5 3.8 2 1 0 2 2 2 1 Breast carcinoma amplified sequence 2 (BCAS2) Fib_alpha PF08702.10 ORF19803 - 0.016 15.4 16.2 0.43 10.8 2.6 3.2 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 ORF19803 - 0.018 13.9 35.3 0.16 10.8 14.6 2.6 1 1 2 3 3 3 0 Spc7 kinetochore protein Borrelia_lipo_1 PF05714.11 ORF19803 - 0.042 13.6 3.5 2.1 8.1 0.1 3.3 2 1 1 3 3 3 0 Borrelia burgdorferi virulent strain associated lipoprotein PqqD PF05402.12 ORF19803 - 0.048 14.0 3.2 6.3 7.2 0.0 4.1 3 2 0 3 3 3 0 Coenzyme PQQ synthesis protein D (PqqD) HMMR_N PF15905.5 ORF19803 - 0.075 12.5 32.4 0.021 14.3 8.1 2.3 1 1 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF3447 PF11929.8 ORF19803 - 0.22 11.5 0.0 0.43 10.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3447) ApoLp-III PF07464.11 ORF19803 - 0.37 10.9 21.3 5.1 7.2 1.3 3.1 2 1 1 3 3 3 0 Apolipophorin-III precursor (apoLp-III) Sec34 PF04136.15 ORF19803 - 0.66 9.8 12.1 7.2 6.5 0.4 3.7 2 1 2 4 4 4 0 Sec34-like family DUF1664 PF07889.12 ORF19803 - 1.8 8.7 16.6 4.1 7.5 2.0 3.6 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Nre_C PF04895.12 ORF19803 - 1.8 8.5 10.8 0.4 10.6 1.0 3.5 2 1 1 3 3 3 0 Archaeal Nre, C-terminal DASH_Duo1 PF08651.10 ORF19803 - 3.3 7.5 6.0 6.8 6.5 1.3 3.4 2 1 1 3 3 3 0 DASH complex subunit Duo1 Tweety PF04906.13 ORF19803 - 5.9 5.4 12.0 1.1 7.9 0.8 2.8 2 1 1 3 3 3 0 Tweety DUF29 PF01724.16 ORF19803 - 8.1 6.7 14.0 0.12 12.7 2.0 2.8 2 1 1 3 3 3 0 Domain of unknown function DUF29 Baculo_F PF12259.8 ORF19803 - 8.5 4.8 7.6 0.6 8.6 1.6 1.8 1 1 1 2 2 2 0 Baculovirus F protein Apolipoprotein PF01442.18 ORF1408 - 1.8e-13 50.8 41.6 0.0014 18.5 13.8 6.2 1 1 2 3 3 3 3 Apolipoprotein A1/A4/E domain DUF5324 PF17258.2 ORF1408 - 6.4e-07 29.3 99.2 0.019 14.6 20.4 5.6 1 1 4 6 6 6 6 Family of unknown function (DUF5324) DUF883 PF05957.13 ORF1408 - 0.00032 21.2 54.0 0.12 13.0 5.4 8.5 1 1 4 6 6 6 2 Bacterial protein of unknown function (DUF883) DUF5318 PF17249.2 ORF1408 - 0.0012 18.7 30.2 2.2 8.0 0.2 9.7 1 1 12 14 14 14 3 Family of unknown function (DUF5318) Phasin_2 PF09361.10 ORF1408 - 0.18 12.1 51.1 3.1 8.1 8.8 6.5 1 1 4 5 5 5 0 Phasin protein Prefoldin PF02996.17 ORF1408 - 0.21 11.5 9.9 53 3.8 0.0 6.1 7 0 0 7 7 7 0 Prefoldin subunit FAM163 PF15069.6 ORF1408 - 0.4 11.1 5.7 0.097 13.1 0.4 2.6 2 1 1 3 3 3 0 FAM163 family Pacs-1 PF10254.9 ORF1408 - 2 7.3 15.9 9 5.1 0.6 3.6 1 1 3 4 4 4 0 PACS-1 cytosolic sorting protein PPDK_N PF01326.19 ORF11900 - 3.4e-32 112.0 0.0 5.5e-32 111.3 0.0 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ubiquitin PF00240.23 ORF107969 - 0.0051 16.5 4.0 0.7 9.7 0.0 4.3 5 1 0 5 5 5 1 Ubiquitin family Presenilin PF01080.17 ORF107969 - 0.13 11.0 10.9 0.19 10.5 10.9 1.1 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 ORF107969 - 0.2 10.4 16.0 0.35 9.6 16.0 1.4 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Zip PF02535.22 ORF107969 - 0.3 10.3 8.1 0.41 9.8 8.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Menin PF05053.13 ORF107969 - 0.4 9.0 9.1 0.56 8.5 9.1 1.1 1 0 0 1 1 1 0 Menin DUF913 PF06025.12 ORF107969 - 0.69 8.8 7.1 1 8.2 7.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Paramyxo_ncap PF00973.19 ORF107969 - 0.75 8.6 7.3 1 8.2 7.3 1.2 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Neur_chan_memb PF02932.16 ORF107969 - 1.3 9.0 4.6 2 8.4 4.6 1.4 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Radial_spoke PF04712.12 ORF104288 - 3.2e-86 290.2 7.1 1.2e-59 202.6 4.6 2.0 1 1 1 2 2 2 2 Radial spokehead-like protein DUF2833 PF11090.8 NODE_9029_length_1433_cov_100.206009_g6622_i0reverse_frame_1 - 0.099 13.0 0.2 0.4 11.1 0.2 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2833) DUF1195 PF06708.11 ORF94176 - 0.0034 17.1 0.0 0.0089 15.8 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) SURNod19 PF07712.12 ORF77508 - 2.3e-19 69.4 4.2 7.7e-15 54.5 2.0 2.8 2 1 0 2 2 2 2 Stress up-regulated Nod 19 Evr1_Alr PF04777.13 ORF765 - 0.058 13.9 0.1 0.14 12.6 0.1 1.6 1 0 0 1 1 1 0 Erv1 / Alr family Ion_trans PF00520.31 ORF5099 - 1.9e-15 56.7 14.6 2.7e-15 56.3 14.6 1.2 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF5099 - 9.2e-10 37.8 10.6 1.2e-08 34.1 6.0 2.1 1 1 1 2 2 2 2 Polycystin cation channel CitMHS PF03600.16 ORF5099 - 0.029 13.6 1.2 0.16 11.1 0.0 2.0 2 0 0 2 2 2 0 Citrate transporter DivIC PF04977.15 ORF5099 - 0.12 12.2 0.2 0.37 10.6 0.2 1.8 1 0 0 1 1 1 0 Septum formation initiator Pkinase PF00069.25 ORF42680 - 3.7e-67 226.5 1.5 7.6e-67 225.4 0.2 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42680 - 8.1e-42 143.3 0.1 1.3e-41 142.6 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF42680 - 1.3e-15 57.6 12.7 2.2e-10 40.8 1.3 3.3 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF42680 - 8e-14 51.2 15.2 9.2e-07 28.6 0.5 4.5 3 2 2 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF42680 - 3.5e-13 48.1 18.4 0.00015 21.0 1.0 4.6 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF42680 - 1.2e-10 40.4 14.4 0.0006 19.5 0.4 4.7 4 0 0 4 4 4 3 EF-hand domain Kinase-like PF14531.6 ORF42680 - 1.9e-08 34.0 0.0 8.5e-07 28.6 0.0 2.4 1 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF42680 - 3.6e-06 26.2 0.1 6.7e-06 25.3 0.1 1.5 1 0 0 1 1 1 1 Haspin like kinase domain EF-hand_5 PF13202.6 ORF42680 - 5.4e-06 25.7 11.8 0.00012 21.4 0.9 3.4 3 0 0 3 3 3 2 EF hand Pkinase_fungal PF17667.1 ORF42680 - 2.2e-05 23.4 0.1 8.5e-05 21.5 0.0 1.6 1 1 1 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF42680 - 2.8e-05 23.6 0.1 5.4e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF42680 - 0.0014 18.6 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_4 PF12763.7 ORF42680 - 0.0035 17.3 3.3 1 9.4 0.1 2.9 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand CDC4_D PF16856.5 ORF42680 - 0.04 13.8 0.1 0.15 12.0 0.1 2.0 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain Spuma_A9PTase PF03539.14 ORF42680 - 0.075 13.2 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Spumavirus aspartic protease (A9) TolA_bind_tri PF16331.5 ORF41161 - 3.3 7.8 10.9 0.22 11.6 1.4 2.4 2 0 0 2 2 2 0 TolA binding protein trimerisation Csm1_N PF18504.1 ORF41161 - 3.6 8.0 8.5 4.2 7.8 1.1 2.8 2 0 0 2 2 2 0 Csm1 N-terminal domain DUF1195 PF06708.11 ORF37056 - 0.0037 17.0 0.0 0.0089 15.8 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) Evr1_Alr PF04777.13 ORF32352 - 0.058 13.9 0.1 0.14 12.6 0.1 1.6 1 0 0 1 1 1 0 Erv1 / Alr family Evr1_Alr PF04777.13 ORF29614 - 0.058 13.9 0.1 0.14 12.6 0.1 1.6 1 0 0 1 1 1 0 Erv1 / Alr family DUF1195 PF06708.11 ORF16880 - 0.0034 17.1 0.0 0.0089 15.8 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) Peptidase_M14 PF00246.24 ORF13501 - 1.7e-10 41.2 0.0 3.4e-10 40.2 0.0 1.4 1 0 0 1 1 1 1 Zinc carboxypeptidase Pkinase PF00069.25 ORF13440 - 3.7e-67 226.5 1.5 7.6e-67 225.4 0.2 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13440 - 8.1e-42 143.3 0.1 1.3e-41 142.6 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF13440 - 1.5e-15 57.4 13.3 2.2e-10 40.8 1.3 3.2 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF13440 - 2.4e-13 49.7 16.0 9.2e-07 28.6 0.5 4.5 3 2 2 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF13440 - 4.3e-13 47.8 19.8 0.00015 21.0 1.0 4.6 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF13440 - 5.6e-11 41.5 16.0 0.0006 19.5 0.4 4.7 4 0 0 4 4 4 3 EF-hand domain Kinase-like PF14531.6 ORF13440 - 2e-08 33.9 0.0 8.5e-07 28.6 0.0 2.4 1 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF13440 - 3.6e-06 26.2 0.1 6.7e-06 25.3 0.1 1.5 1 0 0 1 1 1 1 Haspin like kinase domain EF-hand_5 PF13202.6 ORF13440 - 5.3e-06 25.7 11.8 0.00012 21.4 0.9 3.4 3 0 0 3 3 3 2 EF hand Pkinase_fungal PF17667.1 ORF13440 - 2.2e-05 23.4 0.1 8.5e-05 21.5 0.0 1.6 1 1 1 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF13440 - 2.8e-05 23.6 0.1 5.4e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF13440 - 0.0014 18.6 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_4 PF12763.7 ORF13440 - 0.038 13.9 3.6 4.5 7.3 0.5 2.9 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand CDC4_D PF16856.5 ORF13440 - 0.04 13.8 0.1 0.15 12.0 0.1 2.0 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain Spuma_A9PTase PF03539.14 ORF13440 - 0.075 13.2 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Spumavirus aspartic protease (A9) FYVE PF01363.21 ORF1233 - 2.5e-17 62.7 12.9 5.4e-17 61.7 12.9 1.6 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF1233 - 0.0065 16.7 8.5 0.0065 16.7 8.5 2.1 2 0 0 2 2 2 1 FYVE-type zinc finger Zf_RING PF16744.5 ORF1233 - 7.1 6.8 10.0 27 5.0 10.1 1.9 1 1 0 1 1 1 0 KIAA1045 RING finger Pkinase PF00069.25 ORF110658 - 3.7e-67 226.5 1.5 7.6e-67 225.4 0.2 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF110658 - 8.1e-42 143.3 0.1 1.3e-41 142.6 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF110658 - 1.5e-15 57.4 13.3 2.2e-10 40.8 1.3 3.2 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF110658 - 2.4e-13 49.7 16.0 9.2e-07 28.6 0.5 4.5 3 2 2 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF110658 - 4.3e-13 47.8 19.8 0.00015 21.0 1.0 4.6 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF110658 - 5.6e-11 41.5 16.0 0.0006 19.5 0.4 4.7 4 0 0 4 4 4 3 EF-hand domain Kinase-like PF14531.6 ORF110658 - 2e-08 33.9 0.0 8.5e-07 28.6 0.0 2.4 1 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF110658 - 3.6e-06 26.2 0.1 6.7e-06 25.3 0.1 1.5 1 0 0 1 1 1 1 Haspin like kinase domain EF-hand_5 PF13202.6 ORF110658 - 5.3e-06 25.7 11.8 0.00012 21.4 0.9 3.4 3 0 0 3 3 3 2 EF hand Pkinase_fungal PF17667.1 ORF110658 - 2.2e-05 23.4 0.1 8.5e-05 21.5 0.0 1.6 1 1 1 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF110658 - 2.8e-05 23.6 0.1 5.4e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF110658 - 0.0014 18.6 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_4 PF12763.7 ORF110658 - 0.038 13.9 3.6 4.5 7.3 0.5 2.9 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand CDC4_D PF16856.5 ORF110658 - 0.04 13.8 0.1 0.15 12.0 0.1 2.0 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain Spuma_A9PTase PF03539.14 ORF110658 - 0.075 13.2 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Spumavirus aspartic protease (A9) DUF1195 PF06708.11 ORF110121 - 0.0037 17.0 0.0 0.0089 15.8 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) Aconitase PF00330.20 ORF104014 - 6.2e-42 144.2 0.0 8.6e-40 137.1 0.0 2.4 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) PI-TkoII_IV PF18714.1 ORF104014 - 0.069 12.6 0.0 1.9 8.0 0.0 2.3 2 0 0 2 2 2 0 DNA polymerase II intein Domain IV Pkinase PF00069.25 ORF9584 - 3.8e-40 137.9 0.1 7.4e-40 137.0 0.1 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9584 - 3.2e-25 88.9 0.0 5.5e-25 88.1 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF9584 - 5.4e-07 29.2 0.0 1e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF9584 - 0.025 14.0 0.2 0.044 13.1 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Glyco_hydro_7 PF00840.20 ORF94796 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Glyco_hydro_7 PF00840.20 ORF91778 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Selenoprotein_S PF06936.11 ORF85047 - 8.3 6.2 22.0 10 5.9 8.8 2.4 2 0 0 2 2 2 0 Selenoprotein S (SelS) Glyco_hydro_7 PF00840.20 ORF84323 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 AdoHcyase PF05221.17 ORF81518 - 7.8e-133 442.2 0.1 8.9e-133 442.0 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 ORF81518 - 3.7e-80 267.7 4.2 6.4e-80 266.9 4.2 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 ORF81518 - 1.2e-08 34.5 0.2 2.3e-08 33.6 0.2 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF81518 - 0.00011 22.3 0.2 0.00027 21.0 0.2 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 ORF81518 - 0.00013 21.6 0.3 0.00022 20.9 0.3 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 ORF81518 - 0.00027 21.4 0.4 0.0013 19.1 0.3 2.1 2 0 0 2 2 2 1 Putative NAD(P)-binding THF_DHG_CYH_C PF02882.19 ORF81518 - 0.00029 20.2 1.8 0.0013 18.0 1.7 2.1 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TrkA_N PF02254.18 ORF81518 - 0.00085 19.6 0.4 0.0037 17.5 0.4 2.0 1 1 0 1 1 1 1 TrkA-N domain ELFV_dehydrog PF00208.21 ORF81518 - 0.001 18.8 0.2 0.0018 18.0 0.2 1.4 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 3HCDH_N PF02737.18 ORF81518 - 0.054 13.4 0.7 0.13 12.2 0.5 1.6 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sigma54_DBD PF04552.13 ORF70176 - 6e-71 237.3 0.4 1.1e-70 236.4 0.4 1.5 1 0 0 1 1 1 1 Sigma-54, DNA binding domain Sigma54_CBD PF04963.13 ORF70176 - 3.1e-62 209.6 0.2 3.1e-62 209.6 0.2 1.8 2 0 0 2 2 2 1 Sigma-54 factor, core binding domain Sigma54_AID PF00309.20 ORF70176 - 5e-16 58.3 20.9 1.3e-15 57.0 20.9 1.8 1 0 0 1 1 1 1 Sigma-54 factor, Activator interacting domain (AID) MarR PF01047.22 ORF70176 - 0.096 12.6 0.3 5.6 7.0 0.1 3.0 3 0 0 3 3 3 0 MarR family DUF21 PF01595.20 ORF6727 - 3.2e-26 92.1 0.6 5.3e-26 91.4 0.6 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain YrhC PF14143.6 ORF6727 - 0.02 15.0 2.5 0.044 13.9 2.5 1.5 1 0 0 1 1 1 0 YrhC-like protein CBS PF00571.28 ORF6727 - 0.096 13.1 0.4 21 5.7 0.1 3.0 2 1 0 2 2 2 0 CBS domain ABC2_membrane PF01061.24 ORF6727 - 1.7 8.0 6.7 2.5 7.5 6.7 1.2 1 0 0 1 1 1 0 ABC-2 type transporter Glyco_hydro_7 PF00840.20 ORF63274 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Glyco_hydro_7 PF00840.20 ORF58892 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Peptidase_S28 PF05577.12 ORF57141 - 1.7e-83 280.8 2.0 2.6e-83 280.3 2.0 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Glyco_hydro_7 PF00840.20 ORF45573 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Glyco_hydro_7 PF00840.20 ORF41111 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Glyco_transf_5 PF08323.11 ORF38540 - 3.2e-72 243.2 0.2 1.4e-71 241.0 0.0 1.9 2 0 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 ORF38540 - 2e-12 47.0 0.0 3.1e-12 46.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 ORF38540 - 1.2e-11 44.9 0.9 3.2e-10 40.3 2.4 2.5 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 ORF38540 - 2.5e-10 41.0 6.6 1.7e-08 35.1 4.3 3.0 2 2 1 3 3 3 2 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 ORF38540 - 4.5e-06 27.1 0.0 9.1e-06 26.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Ion_trans PF00520.31 ORF34452 - 1.8e-21 76.5 14.3 2.3e-21 76.2 14.3 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF34452 - 9.8e-08 31.0 1.3 8.7e-06 24.9 0.1 3.4 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF34452 - 1.5e-06 27.7 0.5 0.00012 21.8 0.1 3.0 3 0 0 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF34452 - 2.7e-06 27.1 0.5 2.7e-06 27.1 0.5 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF34452 - 2.6e-05 24.6 0.7 6.8e-05 23.2 0.7 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF34452 - 0.00014 21.2 0.2 0.00056 19.3 0.2 2.0 1 0 0 1 1 1 1 EF hand FA_desaturase PF00487.24 ORF34452 - 1 9.1 10.0 2.1 8.1 0.4 2.2 1 1 1 2 2 2 0 Fatty acid desaturase MlaD PF02470.20 ORF33642 - 0.019 15.3 0.5 0.047 14.0 0.5 1.6 1 0 0 1 1 1 0 MlaD protein YkyA PF10368.9 ORF33263 - 0.11 12.2 0.7 31 4.2 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF33263 - 0.21 11.5 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF33263 - 0.21 11.9 0.0 1.8 8.9 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor Melibiase_2 PF16499.5 ORF25703 - 2.7e-09 36.6 0.1 1.2e-08 34.5 0.0 2.0 2 1 0 2 2 2 1 Alpha galactosidase A Melibiase_C PF17801.1 ORF25703 - 7.4e-07 29.2 0.0 1.6e-06 28.1 0.0 1.6 1 0 0 1 1 1 1 Alpha galactosidase C-terminal beta sandwich domain OxoDH_E1alpha_N PF12573.8 ORF25703 - 0.082 12.7 0.6 2.1 8.2 0.2 2.5 2 0 0 2 2 2 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal Ricin_B_lectin PF00652.22 ORF25703 - 0.18 12.1 2.1 4.7 7.5 0.1 3.1 3 1 0 3 3 3 0 Ricin-type beta-trefoil lectin domain Glyco_hydro_7 PF00840.20 ORF112137 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Glyco_hydro_7 PF00840.20 ORF108488 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Peptidase_S10 PF00450.22 ORF97953 - 5.8e-102 342.2 4.0 6.8e-102 342.0 4.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase DUF1283 PF06932.11 ORF97953 - 0.16 12.2 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) PKcGMP_CC PF16808.5 ORF94869 - 0.15 11.9 0.6 0.36 10.7 0.6 1.6 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DIRP PF06584.13 ORF94869 - 0.35 11.1 2.4 7.6 6.8 0.1 2.5 2 0 0 2 2 2 0 DIRP Pkinase PF00069.25 ORF94091 - 1.2e-63 214.9 0.1 1.8e-63 214.4 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94091 - 4.7e-47 160.4 0.0 7e-47 159.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF94091 - 1.8e-08 34.0 0.0 6.3e-08 32.3 0.0 1.9 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF94091 - 0.0014 17.5 0.0 0.0072 15.2 0.0 1.9 2 0 0 2 2 2 1 Fungal protein kinase RIO1 PF01163.22 ORF94091 - 0.0041 16.8 0.1 0.011 15.4 0.1 1.7 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 ORF94091 - 0.0061 15.9 0.0 0.012 15.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF94091 - 0.01 15.5 1.1 0.57 9.8 0.1 2.3 1 1 1 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF94091 - 0.015 14.2 0.1 0.036 13.0 0.1 1.6 1 0 0 1 1 1 0 Haspin like kinase domain AMP-binding PF00501.28 ORF9257 - 7.8e-35 120.3 0.1 1.1e-34 119.8 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme SK_channel PF03530.14 ORF83405 - 3.5e-08 33.4 0.9 8.1e-08 32.3 0.9 1.6 1 0 0 1 1 1 1 Calcium-activated SK potassium channel Ion_trans_2 PF07885.16 ORF83405 - 4.6e-07 29.7 5.4 4.6e-07 29.7 5.4 2.0 2 0 0 2 2 2 1 Ion channel Ion_trans PF00520.31 ORF83405 - 6e-07 28.9 16.2 9.8e-07 28.2 16.2 1.3 1 0 0 1 1 1 1 Ion transport protein Med9 PF07544.13 ORF83405 - 0.054 13.6 0.3 0.25 11.5 0.3 2.0 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Pox_A_type_inc PF04508.12 ORF83405 - 0.2 11.5 1.6 0.51 10.3 1.6 1.7 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat ABC_membrane PF00664.23 ORF69635 - 3.7e-27 95.7 3.3 4.8e-27 95.3 3.3 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF69635 - 4.9e-27 95.1 0.0 1.3e-26 93.8 0.0 1.7 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF69635 - 4.1e-07 29.7 0.1 0.00013 21.5 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF69635 - 0.00018 21.4 0.6 0.64 9.8 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF69635 - 0.0046 17.0 0.0 0.017 15.2 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase DUF87 PF01935.17 ORF69635 - 0.014 15.5 0.0 0.033 14.3 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_24 PF13479.6 ORF69635 - 0.023 14.4 0.1 0.082 12.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF4051 PF13260.6 ORF69635 - 0.037 13.8 0.2 0.084 12.6 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) SbcCD_C PF13558.6 ORF69635 - 0.049 13.9 0.0 0.1 12.8 0.0 1.6 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 ORF69635 - 0.093 13.0 0.2 0.52 10.6 0.2 2.1 1 1 0 1 1 1 0 AAA domain CENP-O PF09496.10 ORF69635 - 0.098 12.6 0.0 1.4 8.8 0.0 2.1 2 0 0 2 2 2 0 Cenp-O kinetochore centromere component DUF4332 PF14229.6 ORF69635 - 0.11 12.7 0.4 6.1 7.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4332) ABC_membrane PF00664.23 ORF47510 - 3.7e-27 95.7 3.3 4.8e-27 95.3 3.3 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF47510 - 4.9e-27 95.1 0.0 1.3e-26 93.8 0.0 1.7 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF47510 - 4.1e-07 29.7 0.1 0.00013 21.5 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF47510 - 0.00018 21.4 0.6 0.64 9.8 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF47510 - 0.0046 17.0 0.0 0.017 15.2 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase DUF87 PF01935.17 ORF47510 - 0.014 15.5 0.0 0.033 14.3 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_24 PF13479.6 ORF47510 - 0.023 14.4 0.1 0.082 12.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF4051 PF13260.6 ORF47510 - 0.037 13.8 0.2 0.084 12.6 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) SbcCD_C PF13558.6 ORF47510 - 0.049 13.9 0.0 0.1 12.8 0.0 1.6 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 ORF47510 - 0.093 13.0 0.2 0.52 10.6 0.2 2.1 1 1 0 1 1 1 0 AAA domain CENP-O PF09496.10 ORF47510 - 0.098 12.6 0.0 1.4 8.8 0.0 2.1 2 0 0 2 2 2 0 Cenp-O kinetochore centromere component DUF4332 PF14229.6 ORF47510 - 0.11 12.7 0.4 6.1 7.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4332) Piezo_RRas_bdg PF12166.8 ORF43151 - 2.6e-80 270.8 0.0 3e-80 270.6 0.0 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF3085 PF11284.8 ORF43151 - 0.019 15.3 0.0 0.044 14.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3085) Glyco_transf_6 PF03414.13 ORF37861 - 0.062 12.1 0.5 6.6 5.4 0.1 2.3 2 0 0 2 2 2 0 Glycosyltransferase family 6 Sec62 PF03839.16 ORF37861 - 0.08 12.4 3.8 0.13 11.8 3.8 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 Arch_flagellin PF01917.16 ORF37861 - 0.56 10.4 5.3 0.097 12.9 1.1 1.9 2 1 0 2 2 2 0 Archaebacterial flagellin AMP-binding PF00501.28 ORF34204 - 7.8e-35 120.3 0.1 1.1e-34 119.8 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Peptidase_S10 PF00450.22 ORF32169 - 3e-102 343.2 3.9 3.5e-102 342.9 3.9 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase DUF1283 PF06932.11 ORF32169 - 0.16 12.2 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) Peptidase_S28 PF05577.12 ORF28743 - 2.3e-74 250.8 7.5 3.3e-74 250.2 7.5 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF28743 - 0.042 13.3 0.1 0.072 12.5 0.1 1.5 1 0 0 1 1 1 0 Prolyl oligopeptidase family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks17.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks17.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks17.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks17.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:49:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NifU PF01106.17 NODE_48878_length_384_cov_105.146132_g40996_i0forward_frame_1 - 4.1e-21 74.9 0.0 5.3e-21 74.5 0.0 1.2 1 0 0 1 1 1 1 NifU-like domain IF2_assoc PF08364.11 NODE_48876_length_384_cov_111.802292_g40994_i0reverse_frame_1 - 0.021 15.0 0.2 1 9.7 0.1 2.4 2 0 0 2 2 2 0 Bacterial translation initiation factor IF-2 associated region 5TM-5TMR_LYT PF07694.12 NODE_48871_length_384_cov_134.590258_g40989_i0forward_frame_1 - 0.1 12.1 0.6 0.14 11.7 0.6 1.2 1 0 0 1 1 1 0 5TMR of 5TMR-LYT NUFIP2 PF15293.6 NODE_48869_length_384_cov_190.618911_g40987_i0reverse_frame_1 - 0.25 10.2 0.0 0.27 10.1 0.0 1.0 1 0 0 1 1 1 0 Nuclear fragile X mental retardation-interacting protein 2 DUF3652 PF12372.8 NODE_48857_length_384_cov_1261.091691_g40975_i0reverse_frame_1 - 0.022 14.6 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 Huntingtin protein region Phage_tail_S PF05069.13 NODE_48857_length_384_cov_1261.091691_g40975_i0forward_frame_1 - 0.083 12.7 0.1 0.091 12.6 0.1 1.1 1 0 0 1 1 1 0 Phage virion morphogenesis family Hol_Tox PF16935.5 NODE_48855_length_384_cov_3447.323782_g40974_i0reverse_frame_1 - 0.15 12.1 0.0 0.76 9.9 0.0 1.9 2 0 0 2 2 2 0 Putative Holin-like Toxin (Hol-Tox) SpoIISB_antitox PF14185.6 NODE_48854_length_384_cov_4733.120344_g40973_i0forward_frame_1 - 0.033 14.1 0.5 0.092 12.6 0.1 1.9 1 1 1 2 2 2 0 Antitoxin SpoIISB, type II toxin-antitoxin system Lung_7-TM_R PF06814.13 NODE_48850_length_385_cov_1.265714_g40969_i0forward_frame_2 - 5.6e-14 52.1 8.7 6e-14 52.0 8.7 1.0 1 0 0 1 1 1 1 Lung seven transmembrane receptor GpcrRhopsn4 PF10192.9 NODE_48850_length_385_cov_1.265714_g40969_i0forward_frame_2 - 0.00011 21.7 11.4 0.00012 21.6 11.4 1.1 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain Pro_sub2 PF18513.1 NODE_48848_length_385_cov_1.331429_g40967_i0reverse_frame_2 - 0.018 15.2 2.1 0.023 14.8 0.6 2.0 1 1 2 3 3 3 0 Prodomain subtilisin 2 DSPc PF00782.20 NODE_48846_length_385_cov_1.548571_g40965_i0reverse_frame_2 - 2.8e-11 43.4 0.1 3.3e-11 43.1 0.1 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_48846_length_385_cov_1.548571_g40965_i0reverse_frame_2 - 0.00064 19.4 0.0 0.00071 19.2 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase RE_CfrBI PF09516.10 NODE_48846_length_385_cov_1.548571_g40965_i0reverse_frame_2 - 0.06 12.8 0.1 0.11 11.8 0.0 1.4 1 1 1 2 2 2 0 CfrBI restriction endonuclease DcuC PF03606.15 NODE_48836_length_385_cov_2.051429_g40955_i0reverse_frame_3 - 7.3e-26 90.6 0.6 9.1e-26 90.3 0.6 1.1 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier Pept_tRNA_hydro PF01195.19 NODE_48835_length_385_cov_2.057143_g40954_i0reverse_frame_2 - 1.4e-39 135.8 0.0 1.6e-39 135.6 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase Fe-S_biosyn PF01521.20 NODE_48832_length_385_cov_2.248571_g40951_i0forward_frame_2 - 0.053 13.7 0.0 0.071 13.3 0.0 1.2 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis RANK_CRD_2 PF18278.1 NODE_48828_length_385_cov_2.677143_g40947_i0reverse_frame_3 - 0.16 12.2 2.9 1.8 8.8 0.3 2.4 2 0 0 2 2 2 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 HTH_ABP1_N PF18107.1 NODE_48828_length_385_cov_2.677143_g40947_i0reverse_frame_2 - 0.098 12.4 0.3 0.44 10.3 0.0 2.0 2 0 0 2 2 2 0 Fission yeast centromere protein N-terminal domain AtpR PF12966.7 NODE_48827_length_385_cov_2.722857_g40946_i0forward_frame_2 - 0.074 13.5 0.3 0.11 13.0 0.3 1.2 1 0 0 1 1 1 0 N-ATPase, AtpR subunit HIF-1a_CTAD PF08778.10 NODE_48826_length_385_cov_2.731429_g40945_i0reverse_frame_3 - 0.13 11.9 0.6 0.37 10.4 0.1 1.9 2 0 0 2 2 2 0 HIF-1 alpha C terminal transactivation domain PsiF_repeat PF07769.14 NODE_48826_length_385_cov_2.731429_g40945_i0forward_frame_2 - 0.2 11.6 0.7 0.35 10.8 0.7 1.4 1 0 0 1 1 1 0 psiF repeat SIS PF01380.22 NODE_48820_length_385_cov_4.102857_g40939_i0reverse_frame_2 - 1.5e-11 44.2 0.3 2e-11 43.9 0.3 1.2 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 NODE_48820_length_385_cov_4.102857_g40939_i0reverse_frame_2 - 2e-07 31.1 0.6 1.1e-05 25.5 0.1 2.2 1 1 1 2 2 2 2 SIS domain FBPase_glpX PF03320.13 NODE_48820_length_385_cov_4.102857_g40939_i0reverse_frame_2 - 0.026 13.4 0.6 0.15 10.9 0.1 1.9 2 0 0 2 2 2 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DUF4773 PF15998.5 NODE_48819_length_385_cov_4.202857_g40938_i0forward_frame_3 - 0.19 12.2 0.7 0.38 11.3 0.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4773) DUF4665 PF15679.5 NODE_48815_length_385_cov_22.491429_g40934_i0forward_frame_3 - 0.025 15.2 1.6 0.046 14.3 1.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4665) Ras PF00071.22 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 4.2e-08 32.9 0.0 7.1e-08 32.2 0.0 1.3 1 1 0 1 1 1 1 Ras family Roc PF08477.13 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 5.3e-08 33.1 0.0 1.1e-07 32.1 0.0 1.5 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 0.015 14.8 0.0 0.02 14.4 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family G-alpha PF00503.20 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 0.017 14.3 0.1 0.021 14.0 0.1 1.2 1 0 0 1 1 1 0 G-protein alpha subunit TniB PF05621.11 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 0.093 12.1 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein NCBP3 PF10309.9 NODE_48810_length_385_cov_54.160000_g40929_i0reverse_frame_2 - 0.028 14.3 0.1 0.066 13.1 0.0 1.8 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 PIG-H PF10181.9 NODE_48802_length_385_cov_91.742857_g40921_i0reverse_frame_2 - 4.4e-13 48.9 0.1 6.6e-13 48.3 0.1 1.2 1 0 0 1 1 1 1 GPI-GlcNAc transferase complex, PIG-H component UPF0542 PF15086.6 NODE_48796_length_385_cov_156.500000_g40915_i0reverse_frame_3 - 0.59 10.1 4.2 1.1 9.2 4.2 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 U83 PF17465.2 NODE_48789_length_386_cov_1.042735_g40909_i0reverse_frame_2 - 0.0092 16.1 1.4 0.19 11.9 0.3 2.2 2 0 0 2 2 2 2 Chemokine-like protein, HHV-6 U83 gene product F-box-like PF12937.7 NODE_48789_length_386_cov_1.042735_g40909_i0reverse_frame_2 - 1.4 8.9 4.2 0.44 10.5 0.3 2.1 3 0 0 3 3 3 0 F-box-like Flp1_like PF16982.5 NODE_48789_length_386_cov_1.042735_g40909_i0forward_frame_3 - 0.019 14.4 0.2 0.042 13.2 0.2 1.6 1 0 0 1 1 1 0 Putative Flagellin, Flp1-like, domain Dopey_N PF04118.14 NODE_48789_length_386_cov_1.042735_g40909_i0forward_frame_3 - 0.032 13.4 0.0 0.033 13.3 0.0 1.1 1 0 0 1 1 1 0 Dopey, N-terminal CoaE PF01121.20 NODE_48789_length_386_cov_1.042735_g40909_i0forward_frame_3 - 0.066 12.9 0.0 0.085 12.5 0.0 1.1 1 0 0 1 1 1 0 Dephospho-CoA kinase Lamprin PF06403.11 NODE_48785_length_386_cov_1.663818_g40905_i0reverse_frame_3 - 0.057 13.4 0.1 0.065 13.2 0.1 1.1 1 0 0 1 1 1 0 Lamprin Asp PF00026.23 NODE_48784_length_386_cov_1.698006_g40904_i0forward_frame_2 - 0.00013 21.5 0.0 0.00015 21.3 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease E3_binding PF02817.17 NODE_48784_length_386_cov_1.698006_g40904_i0forward_frame_2 - 0.053 13.9 0.0 0.085 13.2 0.0 1.3 1 0 0 1 1 1 0 e3 binding domain TAXi_C PF14541.6 NODE_48784_length_386_cov_1.698006_g40904_i0forward_frame_2 - 0.069 12.9 0.0 0.19 11.5 0.0 1.7 1 1 0 1 1 1 0 Xylanase inhibitor C-terminal Wound_ind PF08186.11 NODE_48783_length_386_cov_1.706553_g40903_i0reverse_frame_2 - 4.4 7.8 5.0 9.8 6.7 1.1 2.2 2 0 0 2 2 2 0 Wound-inducible basic protein family TMEM208_SND2 PF05620.11 NODE_48783_length_386_cov_1.706553_g40903_i0reverse_frame_2 - 5.4 6.8 11.4 10 5.8 11.4 1.5 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 OTT_1508_deam PF14441.6 NODE_48781_length_386_cov_1.737892_g40901_i0reverse_frame_3 - 0.0046 16.9 0.4 0.0082 16.1 0.4 1.6 1 0 0 1 1 1 1 OTT_1508-like deaminase DUF3818 PF12825.7 NODE_48781_length_386_cov_1.737892_g40901_i0reverse_frame_3 - 0.014 14.5 0.6 0.015 14.3 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function in PX-proteins (DUF3818) Helicase_C PF00271.31 NODE_48781_length_386_cov_1.737892_g40901_i0forward_frame_3 - 0.00078 19.8 0.6 0.0026 18.1 0.1 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Mtr2 PF10429.9 NODE_48781_length_386_cov_1.737892_g40901_i0forward_frame_3 - 0.0051 16.8 0.1 0.0079 16.2 0.1 1.3 1 0 0 1 1 1 1 Nuclear pore RNA shuttling protein Mtr2 DUF4018 PF13210.6 NODE_48780_length_386_cov_1.797721_g40900_i0forward_frame_2 - 0.019 14.7 0.6 0.024 14.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) Ion_trans_2 PF07885.16 NODE_48779_length_386_cov_1.829060_g40899_i0reverse_frame_2 - 4.4e-13 49.0 7.6 5.9e-13 48.6 7.6 1.2 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 NODE_48779_length_386_cov_1.829060_g40899_i0reverse_frame_2 - 1.4e-08 34.3 5.0 1.9e-08 33.9 5.0 1.2 1 0 0 1 1 1 1 Ion transport protein Dip PF17679.1 NODE_48779_length_386_cov_1.829060_g40899_i0reverse_frame_2 - 0.024 14.2 0.1 0.029 14.0 0.1 1.1 1 0 0 1 1 1 0 gp37/Dip protein UPF0147 PF03685.13 NODE_48779_length_386_cov_1.829060_g40899_i0reverse_frame_2 - 0.052 13.6 0.0 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) Chordopox_A30L PF06015.12 NODE_48772_length_386_cov_2.324786_g40892_i0forward_frame_3 - 0.032 14.0 3.3 0.055 13.3 2.5 1.8 1 1 0 1 1 1 0 Chordopoxvirus A30L protein Herpes_LMP1 PF05297.11 NODE_48769_length_386_cov_2.410256_g40889_i0reverse_frame_2 - 4.1 6.5 8.7 4.6 6.3 8.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) ABC_membrane PF00664.23 NODE_48768_length_386_cov_2.666667_g40888_i0reverse_frame_3 - 1.3e-34 120.1 6.5 1.4e-34 120.0 6.5 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Wzy_C PF04932.15 NODE_48768_length_386_cov_2.666667_g40888_i0reverse_frame_3 - 0.16 11.6 3.0 0.23 11.1 3.0 1.2 1 0 0 1 1 1 0 O-Antigen ligase AAA_19 PF13245.6 NODE_48760_length_386_cov_3.820513_g40880_i0forward_frame_2 - 6.1e-06 26.6 0.0 6.1e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain UvrD-helicase PF00580.21 NODE_48760_length_386_cov_3.820513_g40880_i0forward_frame_2 - 1.7e-05 24.5 0.0 2.1e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain DUF4483 PF14825.6 NODE_48759_length_386_cov_3.837607_g40879_i0forward_frame_2 - 0.077 12.8 0.0 0.11 12.2 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4483) ParG PF09274.10 NODE_48759_length_386_cov_3.837607_g40879_i0forward_frame_2 - 0.13 12.5 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 ParG FadA PF09403.10 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.00073 20.0 6.9 0.0011 19.5 6.9 1.3 1 0 0 1 1 1 1 Adhesion protein FadA CENP-F_leu_zip PF10473.9 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.00081 19.4 2.1 0.0011 19.0 2.1 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HMMR_N PF15905.5 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.001 18.6 4.2 0.001 18.6 4.2 1.3 2 0 0 2 2 2 1 Hyaluronan mediated motility receptor N-terminal DUF4618 PF15397.6 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.0032 16.9 6.7 0.19 11.1 0.7 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4618) CENP-K PF11802.8 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.0038 16.9 6.3 0.0046 16.6 6.3 1.0 1 0 0 1 1 1 1 Centromere-associated protein K FlaC_arch PF05377.11 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.018 15.5 1.6 1.5 9.3 0.8 2.3 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) PrmA PF06325.13 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.019 14.4 1.5 0.022 14.2 1.5 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) G10 PF01125.17 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.026 14.3 1.6 0.036 13.8 1.6 1.3 1 0 0 1 1 1 0 G10 protein Fib_alpha PF08702.10 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.028 14.6 3.0 0.053 13.7 3.0 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.045 13.8 2.9 0.14 12.2 1.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Tup_N PF08581.10 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.073 13.4 6.4 0.53 10.6 1.0 2.3 1 1 1 2 2 2 0 Tup N-terminal UPF0242 PF06785.11 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.089 12.9 4.8 0.12 12.4 4.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3450 PF11932.8 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.13 11.5 1.9 0.6 9.4 0.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF724 PF05266.14 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.18 11.6 5.8 0.27 11.0 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF724) MBOAT PF03062.19 NODE_48751_length_386_cov_55.897436_g40871_i0forward_frame_3 - 0.0017 17.8 2.0 0.0027 17.1 2.0 1.3 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family Flavodoxin_3 PF12641.7 NODE_48750_length_386_cov_57.225071_g40870_i0forward_frame_3 - 0.018 14.8 1.8 0.023 14.4 1.8 1.1 1 0 0 1 1 1 0 Flavodoxin domain PIEZO PF15917.5 NODE_48750_length_386_cov_57.225071_g40870_i0forward_frame_2 - 0.16 11.4 2.1 0.24 10.9 2.2 1.4 1 1 0 1 1 1 0 Piezo NST1 PF13945.6 NODE_48741_length_386_cov_83.239316_g40861_i0reverse_frame_3 - 0.024 14.8 0.7 0.03 14.4 0.7 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator DUF2228 PF10228.9 NODE_48741_length_386_cov_83.239316_g40861_i0reverse_frame_3 - 0.04 13.7 0.4 0.047 13.4 0.4 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2228) DUF2661 PF10860.8 NODE_48738_length_386_cov_85.373219_g40858_i0reverse_frame_3 - 0.047 13.8 1.1 0.097 12.8 0.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2661) RCC1_2 PF13540.6 NODE_48736_length_386_cov_93.752137_g40856_i0reverse_frame_3 - 0.00078 19.2 0.2 0.16 11.8 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Zip PF02535.22 NODE_48736_length_386_cov_93.752137_g40856_i0forward_frame_3 - 1.3 8.2 4.7 1.7 7.8 4.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Biotin_carb_C PF02785.19 NODE_48732_length_386_cov_136.113960_g40852_i0reverse_frame_3 - 0.15 12.2 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Biotin carboxylase C-terminal domain Glycolytic PF00274.19 NODE_48720_length_386_cov_4375.931624_g40840_i0forward_frame_2 - 3.2e-05 22.8 0.2 4e-05 22.5 0.2 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I DUF2497 PF10691.9 NODE_48711_length_387_cov_1.946023_g40832_i0reverse_frame_2 - 0.13 12.7 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2497) Lipl32 PF12103.8 NODE_48707_length_387_cov_2.369318_g40828_i0reverse_frame_2 - 0.39 10.4 4.0 0.49 10.0 4.0 1.2 1 0 0 1 1 1 0 Surface lipoprotein of Spirochaetales order UQ_con PF00179.26 NODE_48704_length_387_cov_2.477273_g40825_i0reverse_frame_3 - 0.0054 16.4 0.0 0.0083 15.8 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme FHA PF00498.26 NODE_48704_length_387_cov_2.477273_g40825_i0forward_frame_3 - 3.5e-06 27.3 0.0 4.1e-05 23.9 0.0 2.0 1 1 1 2 2 2 1 FHA domain MCM_OB PF17207.3 NODE_48703_length_387_cov_2.519886_g40824_i0forward_frame_3 - 0.016 15.1 1.5 0.021 14.7 1.5 1.2 1 0 0 1 1 1 0 MCM OB domain Vanabin-2 PF11437.8 NODE_48703_length_387_cov_2.519886_g40824_i0forward_frame_3 - 0.023 14.9 5.9 0.03 14.5 5.9 1.2 1 0 0 1 1 1 0 Vanadium-binding protein 2 DUF4788 PF16032.5 NODE_48703_length_387_cov_2.519886_g40824_i0forward_frame_3 - 0.05 12.5 0.0 0.054 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4788) Rhabdo_glycop PF00974.18 NODE_48702_length_387_cov_2.602273_g40823_i0reverse_frame_3 - 0.13 10.7 0.0 0.14 10.5 0.0 1.1 1 0 0 1 1 1 0 Rhabdovirus spike glycoprotein DUF5313 PF17240.2 NODE_48701_length_387_cov_2.619318_g40822_i0forward_frame_3 - 6.3 7.2 8.9 9.4 6.7 6.0 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5313) Angiomotin_C PF12240.8 NODE_48693_length_387_cov_2.889205_g40814_i0forward_frame_3 - 0.0033 17.0 0.4 0.0039 16.8 0.4 1.1 1 0 0 1 1 1 1 Angiomotin C terminal ATG16 PF08614.11 NODE_48693_length_387_cov_2.889205_g40814_i0forward_frame_3 - 0.026 14.8 1.5 0.034 14.4 1.5 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) RRM_1 PF00076.22 NODE_48690_length_387_cov_4.406250_g40811_i0forward_frame_2 - 0.0011 18.8 0.3 0.0024 17.6 0.0 1.7 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ORF45 PF17620.2 NODE_48690_length_387_cov_4.406250_g40811_i0forward_frame_2 - 0.023 14.8 0.1 0.028 14.5 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function Pox_H7 PF04787.12 NODE_48683_length_387_cov_12.886364_g40804_i0reverse_frame_3 - 0.13 12.7 2.6 0.19 12.2 2.6 1.2 1 0 0 1 1 1 0 Late protein H7 PSI_PsaJ PF01701.18 NODE_48678_length_387_cov_44.539773_g40799_i0reverse_frame_2 - 2.9 8.5 4.6 0.53 10.9 0.9 1.7 2 0 0 2 2 2 0 Photosystem I reaction centre subunit IX / PsaJ DUF86 PF01934.17 NODE_48676_length_387_cov_55.076705_g40797_i0reverse_frame_3 - 0.046 13.6 0.1 0.063 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF86 MEF2_binding PF09047.10 NODE_48675_length_387_cov_55.803977_g40796_i0reverse_frame_3 - 0.033 14.0 3.1 0.11 12.4 3.1 1.9 1 0 0 1 1 1 0 MEF2 binding Presenilin PF01080.17 NODE_48675_length_387_cov_55.803977_g40796_i0reverse_frame_3 - 6.7 5.4 7.1 7.4 5.2 7.1 1.0 1 0 0 1 1 1 0 Presenilin Nbl1_Borealin_N PF10444.9 NODE_48674_length_387_cov_56.573864_g40795_i0forward_frame_3 - 0.013 15.1 1.4 0.023 14.3 1.4 1.5 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Vir_act_alpha_C PF10400.9 NODE_48674_length_387_cov_56.573864_g40795_i0forward_frame_3 - 0.12 13.1 1.0 0.65 10.7 1.0 2.1 1 1 0 1 1 1 0 Virulence activator alpha C-term HemY_N PF07219.13 NODE_48669_length_387_cov_70.974432_g40790_i0reverse_frame_3 - 0.11 12.7 2.6 0.19 11.9 2.6 1.3 1 0 0 1 1 1 0 HemY protein N-terminus Babuvirus_MP PF07234.11 NODE_48669_length_387_cov_70.974432_g40790_i0reverse_frame_3 - 0.16 12.1 2.2 0.22 11.7 2.2 1.3 1 0 0 1 1 1 0 Movement and RNA silencing protein SR-25 PF10500.9 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 0.0062 16.2 23.6 0.0088 15.7 23.6 1.2 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein DUF4604 PF15377.6 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 0.64 10.4 21.9 0.84 10.0 21.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) DUF3350 PF11830.8 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 2.4 8.6 8.0 0.21 11.9 2.0 2.2 2 1 1 3 3 3 0 Domain of unknown function (DUF3350) Nucleo_P87 PF07267.11 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 2.7 6.7 7.3 3 6.6 7.3 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 DUF4551 PF15087.6 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 6.8 5.4 10.7 8.1 5.1 10.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) fn3_4 PF16794.5 NODE_48668_length_387_cov_71.082386_g22653_i1forward_frame_2 - 0.071 13.0 0.2 0.099 12.6 0.2 1.2 1 0 0 1 1 1 0 Fibronectin-III type domain NID PF07292.13 NODE_48666_length_387_cov_74.190341_g40788_i0reverse_frame_3 - 0.13 12.9 0.1 0.32 11.7 0.0 1.6 2 0 0 2 2 2 0 Nmi/IFP 35 domain (NID) Peptidase_S29 PF02907.15 NODE_48663_length_387_cov_78.727273_g40786_i0reverse_frame_3 - 0.058 13.1 0.2 0.075 12.8 0.2 1.2 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease Thioredoxin PF00085.20 NODE_48663_length_387_cov_78.727273_g40786_i0reverse_frame_2 - 4.5e-13 49.1 0.0 5.8e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 NODE_48663_length_387_cov_78.727273_g40786_i0reverse_frame_2 - 0.005 17.0 0.0 0.009 16.2 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.6 NODE_48663_length_387_cov_78.727273_g40786_i0reverse_frame_2 - 0.013 15.8 0.0 0.017 15.4 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like Thioredoxin_2 PF13098.6 NODE_48663_length_387_cov_78.727273_g40786_i0reverse_frame_2 - 0.089 13.3 0.0 0.15 12.5 0.0 1.5 1 1 0 1 1 1 0 Thioredoxin-like domain NP1-WLL PF11733.8 NODE_48663_length_387_cov_78.727273_g40786_i0forward_frame_2 - 0.14 11.9 0.2 0.18 11.5 0.2 1.1 1 0 0 1 1 1 0 Non-capsid protein NP1 Herpes_gI PF01688.17 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_3 - 0.077 12.9 0.2 0.13 12.2 0.2 1.2 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein I PPR_2 PF13041.6 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 1.2e-12 47.8 0.2 9.3e-09 35.4 0.1 3.1 2 1 1 3 3 3 2 PPR repeat family PPR PF01535.20 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 2.6e-12 46.1 0.5 0.00011 22.1 0.0 4.0 4 0 0 4 4 4 3 PPR repeat PPR_3 PF13812.6 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 1.9e-08 34.3 0.1 4.8e-07 29.8 0.0 2.7 2 1 1 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 0.0044 16.7 0.9 0.91 9.3 0.1 3.2 3 1 1 4 4 4 1 PPR repeat PPR_long PF17177.4 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 0.017 14.5 0.0 0.078 12.3 0.0 1.8 1 1 1 2 2 2 0 Pentacotripeptide-repeat region of PRORP TPR_4 PF07721.14 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 0.068 13.8 3.9 0.45 11.3 1.8 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat PDDEXK_4 PF14281.6 NODE_48657_length_387_cov_86.667614_g40780_i0reverse_frame_2 - 0.05 13.8 0.1 0.067 13.3 0.1 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily XRN1_D2_D3 PF18334.1 NODE_48657_length_387_cov_86.667614_g40780_i0forward_frame_3 - 0.0054 16.9 0.5 0.013 15.7 0.3 1.7 1 1 1 2 2 2 1 Exoribonuclease Xrn1 D2/D3 domain DUF3270 PF11674.8 NODE_48649_length_387_cov_169.187500_g40772_i0reverse_frame_2 - 2.6 8.3 6.9 1.9 8.8 1.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) N-Term_TEN PF11474.8 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 0.0035 17.0 1.9 0.027 14.1 0.2 2.0 2 0 0 2 2 2 1 Telomerase reverse transcriptase TEN domain Crust_neurohorm PF01147.17 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 0.037 13.8 0.9 0.037 13.8 0.9 1.6 2 0 0 2 2 2 0 Crustacean CHH/MIH/GIH neurohormone family AAA_11 PF13086.6 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 0.43 10.3 7.4 0.5 10.1 7.4 1.1 1 0 0 1 1 1 0 AAA domain ALMT PF11744.8 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 0.68 8.7 6.4 0.84 8.4 6.4 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter APG6_N PF17675.1 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 2.2 8.8 14.3 5.6 7.5 14.3 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF1071 PF06378.11 NODE_48639_length_387_cov_3715.062500_g40762_i0reverse_frame_2 - 0.13 11.8 0.1 0.18 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) DUF1071 PF06378.11 NODE_48638_length_387_cov_3715.096591_g40761_i0reverse_frame_2 - 0.13 11.8 0.1 0.18 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) zf-rbx1 PF12678.7 ORF98058 - 0.061 13.6 0.6 5 7.5 0.1 2.3 2 0 0 2 2 2 0 RING-H2 zinc finger domain Vps16_N PF04841.13 ORF97179 - 0.13 11.0 0.0 0.14 10.9 0.0 1.0 1 0 0 1 1 1 0 Vps16, N-terminal region Mito_carr PF00153.27 ORF95748 - 3.1e-19 68.7 0.1 3.7e-19 68.4 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein Pkinase PF00069.25 ORF95058 - 0.00016 21.1 1.8 0.00021 20.7 0.2 1.8 2 0 0 2 2 2 1 Protein kinase domain FTA2 PF13095.6 ORF95058 - 0.1 12.2 0.2 0.43 10.2 0.2 2.0 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUF5641 PF18701.1 ORF94172 - 0.12 12.5 1.0 0.25 11.5 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5641) PSI_PsaE PF02427.17 ORF93975 - 3.7e-24 84.2 1.3 4.9e-24 83.8 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE Pkinase PF00069.25 ORF93464 - 7.4e-24 84.5 0.0 8.8e-24 84.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF93464 - 2.2e-17 63.2 0.0 2.3e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF93464 - 0.00087 18.7 0.0 0.0013 18.1 0.0 1.3 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF93464 - 0.031 13.1 0.0 0.038 12.8 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase CSD PF00313.22 ORF90991 - 0.0001 22.0 0.2 0.0017 18.2 0.1 2.1 2 0 0 2 2 2 1 'Cold-shock' DNA-binding domain Pkinase PF00069.25 ORF90721 - 4.1e-21 75.5 0.2 5.1e-21 75.2 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90721 - 1.4e-10 40.9 0.1 1.7e-10 40.6 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase PSI_PsaE PF02427.17 ORF89564 - 3.7e-24 84.2 1.3 4.9e-24 83.8 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE ArsP_1 PF03773.13 ORF88569 - 0.1 11.7 0.2 0.66 9.1 0.1 1.9 2 0 0 2 2 2 0 Predicted permease Troponin PF00992.20 ORF87587 - 0.022 15.1 1.2 0.029 14.7 1.2 1.1 1 0 0 1 1 1 0 Troponin PSI_PsaE PF02427.17 ORF87376 - 3.7e-24 84.2 1.3 4.9e-24 83.8 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE DUF87 PF01935.17 ORF86797 - 0.00066 19.8 2.3 0.00074 19.7 2.3 1.1 1 0 0 1 1 1 1 Helicase HerA, central domain RNA_pol_Rpb4 PF03874.16 ORF86797 - 0.01 16.2 1.7 0.012 15.9 1.7 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb4 BRCC36_C PF18110.1 ORF86797 - 0.059 13.5 0.1 0.11 12.7 0.1 1.4 1 0 0 1 1 1 0 BRCC36 C-terminal helical domain YfhD PF14151.6 ORF86797 - 6 7.1 7.7 0.66 10.2 0.8 2.4 2 1 1 3 3 3 0 YfhD-like protein ArsP_1 PF03773.13 ORF86516 - 0.1 11.7 0.2 0.66 9.1 0.1 1.9 2 0 0 2 2 2 0 Predicted permease Colicin-DNase PF12639.7 ORF86243 - 5.6e-06 27.1 0.0 7.1e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 DNase/tRNase domain of colicin-like bacteriocin HNH PF01844.23 ORF86243 - 0.00081 19.5 0.1 0.0019 18.4 0.1 1.6 1 0 0 1 1 1 1 HNH endonuclease Aminotran_1_2 PF00155.21 ORF85535 - 4.1e-05 22.9 0.0 5.2e-05 22.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DUF4618 PF15397.6 ORF84650 - 0.08 12.4 5.4 0.096 12.1 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Glyco_trans_1_2 PF13524.6 ORF84650 - 0.2 12.1 5.5 6.1 7.3 1.6 2.2 2 0 0 2 2 2 0 Glycosyl transferases group 1 OmpH PF03938.14 ORF84650 - 0.7 10.2 8.5 0.86 9.9 8.5 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) APG6_N PF17675.1 ORF84650 - 0.76 10.3 15.0 1.1 9.8 15.0 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region GBP_C PF02841.14 ORF84650 - 2.3 7.5 13.4 2.9 7.2 13.4 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain ADIP PF11559.8 ORF84650 - 6.1 6.9 14.8 16 5.6 11.0 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding PP-binding PF00550.25 ORF83984 - 2.9e-08 33.9 0.0 4.1e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site Isochorismatase PF00857.20 ORF83984 - 1.1e-05 25.7 0.1 1.5e-05 25.3 0.1 1.2 1 0 0 1 1 1 1 Isochorismatase family UCMA PF17085.5 ORF83232 - 0.2 11.7 2.0 0.28 11.2 2.0 1.2 1 0 0 1 1 1 0 Unique cartilage matrix associated protein SecIII_SopE_N PF05364.14 ORF82141 - 5.8 7.1 6.3 18 5.5 6.2 1.9 1 1 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus UQ_con PF00179.26 ORF81977 - 4.6e-39 133.3 0.1 5.2e-39 133.1 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF81977 - 0.0072 16.6 0.0 0.011 16.0 0.0 1.3 1 1 0 1 1 1 1 RWD domain RIFIN PF02009.16 ORF81977 - 0.063 13.2 0.1 0.076 12.9 0.1 1.1 1 0 0 1 1 1 0 Rifin SRI PF08236.11 ORF81977 - 0.13 12.4 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 SRI (Set2 Rpb1 interacting) domain DUF3328 PF11807.8 ORF81363 - 0.089 12.5 0.2 0.096 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) DUF4229 PF14012.6 ORF81040 - 0.37 10.9 6.1 0.79 9.9 6.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) ABC_tran PF00005.27 ORF79739 - 1.9e-19 70.6 0.0 2.2e-19 70.3 0.0 1.0 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 ORF79739 - 2.4e-05 24.3 0.1 3.2e-05 23.9 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF79739 - 0.00012 21.7 0.1 0.00018 21.2 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF79739 - 0.00012 22.4 0.1 0.00021 21.6 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF79739 - 0.00037 20.9 0.0 0.00039 20.8 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF79739 - 0.00044 20.4 0.3 0.00066 19.9 0.3 1.3 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 ORF79739 - 0.00048 20.1 0.0 0.0005 20.0 0.0 1.1 1 0 0 1 1 1 1 Rad17 P-loop domain NTPase_1 PF03266.15 ORF79739 - 0.002 18.0 0.3 0.0029 17.5 0.3 1.2 1 0 0 1 1 1 1 NTPase DLIC PF05783.11 ORF79739 - 0.0022 16.9 0.1 0.0027 16.6 0.1 1.1 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA_21 PF13304.6 ORF79739 - 0.0035 17.2 0.0 0.005 16.7 0.0 1.3 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system cobW PF02492.19 ORF79739 - 0.006 16.2 0.1 0.0091 15.6 0.1 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 ORF79739 - 0.0088 16.6 0.2 0.011 16.3 0.2 1.3 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 ORF79739 - 0.011 16.3 0.0 0.018 15.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF79739 - 0.012 15.4 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF79739 - 0.014 14.8 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 KaiC ATPase_2 PF01637.18 ORF79739 - 0.014 15.3 0.0 0.02 14.8 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Dynamin_N PF00350.23 ORF79739 - 0.016 15.3 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 Dynamin family RNA12 PF10443.9 ORF79739 - 0.02 13.6 0.0 0.023 13.4 0.0 1.1 1 0 0 1 1 1 0 RNA12 protein PRK PF00485.18 ORF79739 - 0.023 14.5 0.0 0.03 14.1 0.0 1.3 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family PhoH PF02562.16 ORF79739 - 0.024 14.1 0.0 0.03 13.8 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein IstB_IS21 PF01695.17 ORF79739 - 0.024 14.4 0.0 0.025 14.3 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein Septin PF00735.18 ORF79739 - 0.027 13.8 0.0 0.037 13.3 0.0 1.3 1 0 0 1 1 1 0 Septin AAA_24 PF13479.6 ORF79739 - 0.027 14.2 0.0 0.032 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF79739 - 0.027 14.0 0.1 0.034 13.7 0.1 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region T2SSE PF00437.20 ORF79739 - 0.029 13.4 0.5 0.039 13.0 0.4 1.3 1 1 0 1 1 1 0 Type II/IV secretion system protein S4 PF01479.25 ORF79739 - 0.032 14.0 0.5 0.21 11.3 0.2 2.1 2 0 0 2 2 2 0 S4 domain RNA_helicase PF00910.22 ORF79739 - 0.049 14.0 0.0 0.071 13.5 0.0 1.3 1 0 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 ORF79739 - 0.05 12.8 0.1 0.058 12.6 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain ATP_bind_1 PF03029.17 ORF79739 - 0.059 13.1 0.1 0.1 12.4 0.1 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Mg_chelatase PF01078.21 ORF79739 - 0.063 12.7 0.0 0.091 12.1 0.0 1.4 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 ORF79739 - 0.074 12.6 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF79739 - 0.089 12.1 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin SMC_N PF02463.19 ORF79739 - 0.11 12.0 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain FtsK_SpoIIIE PF01580.18 ORF79739 - 0.13 11.6 0.1 0.22 10.8 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family NACHT PF05729.12 ORF79739 - 0.14 12.1 0.1 0.2 11.6 0.1 1.2 1 0 0 1 1 1 0 NACHT domain DUF815 PF05673.13 ORF79739 - 0.17 11.0 0.1 0.3 10.2 0.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF815) AAA_15 PF13175.6 ORF79739 - 0.18 11.5 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Tfb2 PF03849.14 ORF78920 - 0.017 14.1 0.0 0.025 13.6 0.0 1.3 1 0 0 1 1 1 0 Transcription factor Tfb2 DUF5381 PF17353.2 ORF78920 - 0.019 14.7 0.5 0.028 14.2 0.5 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5381) RicinB_lectin_2 PF14200.6 ORF78758 - 0.065 14.0 0.1 0.096 13.4 0.1 1.2 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin domain-like T_Ag_DNA_bind PF02217.16 ORF78562 - 0.046 14.3 0.0 0.068 13.8 0.0 1.3 1 0 0 1 1 1 0 Origin of replication binding protein DUF218 PF02698.17 ORF77599 - 0.15 12.0 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 DUF218 domain SAF PF08666.12 ORF76525 - 0.00065 20.3 0.0 0.98 10.1 0.0 2.2 2 0 0 2 2 2 2 SAF domain SET PF00856.28 ORF76525 - 0.12 12.8 0.0 4.9 7.5 0.0 2.1 1 1 1 2 2 2 0 SET domain RPN7 PF10602.9 ORF76256 - 2.5e-21 76.2 2.8 2.7e-21 76.0 2.8 1.0 1 0 0 1 1 1 1 26S proteasome subunit RPN7 LMBR1 PF04791.16 ORF76256 - 0.016 14.1 0.5 0.019 13.9 0.5 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein BAR_3 PF16746.5 ORF76256 - 0.049 13.3 0.3 0.049 13.3 0.3 2.3 1 1 2 3 3 3 0 BAR domain of APPL family V-SNARE PF05008.15 ORF76256 - 0.11 12.9 2.0 0.6 10.5 1.0 2.4 2 1 0 2 2 2 0 Vesicle transport v-SNARE protein N-terminus BST2 PF16716.5 ORF76256 - 0.62 10.7 2.9 2.7 8.6 1.8 2.1 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 Ferlin_C PF16165.5 ORF76037 - 0.076 13.0 0.0 0.091 12.7 0.0 1.1 1 0 0 1 1 1 0 Ferlin C-terminus Ribosomal_S19 PF00203.21 ORF76037 - 0.15 12.0 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S19 DUF423 PF04241.15 ORF7555 - 1.9e-21 76.0 0.9 3.2e-21 75.3 0.9 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF423) DUF4457 PF14652.6 ORF74661 - 1.9e-25 89.8 0.1 2.3e-25 89.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4457) DUF5484 PF17583.2 ORF74661 - 0.12 12.1 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5484) DUF4229 PF14012.6 ORF74623 - 0.37 10.9 6.1 0.79 9.9 6.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) Myb_DNA-binding PF00249.31 ORF73898 - 0.097 12.9 0.0 0.4 10.9 0.0 2.0 2 0 0 2 2 2 0 Myb-like DNA-binding domain NDUF_B7 PF05676.13 ORF73898 - 0.13 12.0 0.9 0.25 11.1 0.9 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) PPV_E2_C PF00511.17 ORF73879 - 0.18 12.0 1.5 0.35 11.1 0.2 2.0 2 0 0 2 2 2 0 E2 (early) protein, C terminal ABC_tran PF00005.27 ORF73118 - 3.2e-10 40.7 0.0 5.2e-10 40.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SbcCD_C PF13558.6 ORF73118 - 0.00055 20.1 0.3 0.024 14.9 0.3 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF73118 - 0.00065 19.2 0.0 0.00085 18.8 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF3328 PF11807.8 ORF72985 - 0.089 12.5 0.2 0.096 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) ABC_membrane PF00664.23 ORF7249 - 3e-13 50.0 0.3 3.3e-13 49.9 0.3 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF2083 PF09856.9 ORF7249 - 0.18 11.7 0.0 0.27 11.1 0.0 1.2 1 0 0 1 1 1 0 Predicted transcriptional regulator (DUF2083) DUF4229 PF14012.6 ORF72467 - 0.37 10.9 6.1 0.79 9.9 6.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) zf-rbx1 PF12678.7 ORF72067 - 0.061 13.6 0.6 5 7.5 0.1 2.3 2 0 0 2 2 2 0 RING-H2 zinc finger domain VKOR PF07884.14 ORF72036 - 0.055 13.6 18.0 0.019 15.2 11.4 2.0 1 1 1 2 2 2 0 Vitamin K epoxide reductase family KOW PF00467.29 ORF71776 - 0.00016 21.5 0.3 0.00041 20.2 0.3 1.6 1 0 0 1 1 1 1 KOW motif Staph_opine_DH PF10100.9 ORF71069 - 0.14 10.8 0.0 0.16 10.5 0.0 1.1 1 0 0 1 1 1 0 Staphylopine dehydrogenase RPAP1_N PF08621.10 ORF71069 - 0.34 10.7 2.3 0.39 10.5 0.2 2.0 1 1 1 2 2 2 0 RPAP1-like, N-terminal Dynactin PF12455.8 ORF70659 - 0.0014 17.9 3.0 0.0018 17.6 3.0 1.0 1 0 0 1 1 1 1 Dynein associated protein Spc7 PF08317.11 ORF70659 - 0.0021 17.0 5.0 0.0025 16.8 5.0 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein HAP1_N PF04849.13 ORF70659 - 0.0023 17.2 5.2 0.0026 17.0 5.2 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region DUF812 PF05667.11 ORF70659 - 0.0042 16.0 2.9 0.0048 15.8 2.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF812) V_ATPase_I PF01496.19 ORF70659 - 0.0048 14.9 1.3 0.0055 14.7 1.3 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Golgin_A5 PF09787.9 ORF70659 - 0.0049 16.4 5.4 0.0055 16.2 5.4 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 BLOC1_2 PF10046.9 ORF70659 - 0.0072 16.6 1.4 0.0099 16.2 1.4 1.3 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Mod_r PF07200.13 ORF70659 - 0.011 15.8 7.4 0.013 15.6 7.4 1.1 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Fungal_trans_2 PF11951.8 ORF70659 - 0.012 14.5 2.2 0.015 14.1 2.2 1.3 1 1 0 1 1 1 0 Fungal specific transcription factor domain ZapB PF06005.12 ORF70659 - 0.013 15.9 7.6 1.4 9.4 0.2 2.1 1 1 1 2 2 2 0 Cell division protein ZapB FAM76 PF16046.5 ORF70659 - 0.023 14.1 0.7 0.027 13.8 0.7 1.1 1 0 0 1 1 1 0 FAM76 protein DUF935 PF06074.12 ORF70659 - 0.027 13.2 1.5 0.026 13.3 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF935) DUF1515 PF07439.11 ORF70659 - 0.029 14.4 0.2 0.037 14.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) LMP PF04778.12 ORF70659 - 0.029 14.3 0.2 0.037 13.9 0.2 1.1 1 0 0 1 1 1 0 LMP repeated region CCDC144C PF14915.6 ORF70659 - 0.032 13.4 8.6 0.038 13.1 8.6 1.0 1 0 0 1 1 1 0 CCDC144C protein coiled-coil region EzrA PF06160.12 ORF70659 - 0.036 12.2 3.1 0.044 12.0 3.1 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA DUF842 PF05811.13 ORF70659 - 0.037 13.7 7.1 0.077 12.7 7.0 1.5 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF842) TMF_TATA_bd PF12325.8 ORF70659 - 0.049 13.9 9.3 0.037 14.3 4.4 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF948 PF06103.11 ORF70659 - 0.054 13.8 0.8 0.21 11.9 0.8 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Sec34 PF04136.15 ORF70659 - 0.063 13.2 6.2 0.088 12.7 6.2 1.2 1 0 0 1 1 1 0 Sec34-like family Cob_adeno_trans PF01923.18 ORF70659 - 0.089 12.9 2.0 0.12 12.5 1.7 1.4 1 1 0 1 1 1 0 Cobalamin adenosyltransferase SlyX PF04102.12 ORF70659 - 0.11 13.1 14.3 0.23 12.1 7.4 2.2 1 1 1 2 2 2 0 SlyX DUF1664 PF07889.12 ORF70659 - 0.18 11.8 4.3 0.28 11.2 4.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) EMP24_GP25L PF01105.24 ORF70659 - 0.19 11.7 2.6 0.24 11.4 2.6 1.1 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD RmuC PF02646.16 ORF70659 - 0.21 10.7 5.9 0.27 10.3 5.9 1.1 1 0 0 1 1 1 0 RmuC family FUSC PF04632.12 ORF70659 - 0.23 9.9 5.1 0.26 9.8 5.1 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family bZIP_2 PF07716.15 ORF70659 - 0.24 11.5 2.9 8 6.6 0.2 2.4 2 1 0 2 2 2 0 Basic region leucine zipper ATG16 PF08614.11 ORF70659 - 0.28 11.4 10.4 0.44 10.8 10.4 1.4 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Uso1_p115_C PF04871.13 ORF70659 - 0.36 11.2 5.4 0.46 10.9 5.4 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region HIP1_clath_bdg PF16515.5 ORF70659 - 0.43 11.2 11.0 0.73 10.5 11.0 1.4 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 NPV_P10 PF05531.12 ORF70659 - 0.48 10.9 4.7 1.2 9.6 4.7 1.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ABC_tran_CTD PF16326.5 ORF70659 - 0.49 10.7 7.0 0.97 9.7 5.7 2.0 1 1 1 2 2 2 0 ABC transporter C-terminal domain FlaC_arch PF05377.11 ORF70659 - 0.5 10.8 2.5 2.3 8.7 2.5 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) CENP-H PF05837.12 ORF70659 - 1 9.8 8.7 3.6 8.0 3.8 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Pox_A_type_inc PF04508.12 ORF70659 - 2.6 8.1 7.0 1 9.4 0.3 2.9 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat WBP-1 PF11669.8 ORF69963 - 0.041 14.5 0.4 0.062 13.9 0.4 1.4 1 1 0 1 1 1 0 WW domain-binding protein 1 ARPC4 PF05856.12 ORF69110 - 1.2e-40 138.9 0.7 1.3e-40 138.7 0.7 1.0 1 0 0 1 1 1 1 ARP2/3 complex 20 kDa subunit (ARPC4) Ribosomal_L31 PF01197.18 ORF68042 - 4.5e-07 30.0 0.0 7.1e-07 29.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L31 Pkinase PF00069.25 ORF67996 - 2.9e-30 105.5 0.1 3.2e-30 105.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67996 - 3.3e-20 72.5 0.0 3.7e-20 72.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF67996 - 0.0031 16.5 0.1 0.0036 16.3 0.1 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF67996 - 0.0041 16.5 0.0 0.0048 16.3 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF67996 - 0.023 14.0 0.0 0.024 14.0 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Pkinase_fungal PF17667.1 ORF67996 - 0.039 12.7 0.0 0.047 12.5 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase Antimicrobial19 PF08225.11 ORF67996 - 0.37 10.4 0.1 0.37 10.4 0.1 2.1 2 0 0 2 2 2 0 Pseudin antimicrobial peptide SMODS PF18144.1 ORF66569 - 0.043 14.0 1.0 0.043 14.0 1.0 1.4 2 0 0 2 2 2 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain Antimicrobial20 PF08256.11 ORF66569 - 4.7 8.0 4.9 25 5.8 0.1 2.4 2 0 0 2 2 2 0 Aurein-like antibiotic peptide REC114-like PF15165.6 ORF66534 - 0.13 12.0 2.7 0.15 11.8 2.7 1.1 1 0 0 1 1 1 0 Meiotic recombination protein REC114-like PPL5 PF18168.1 ORF66534 - 0.4 9.9 8.2 0.46 9.7 8.2 1.0 1 0 0 1 1 1 0 Prim-pol family 5 DUF913 PF06025.12 ORF66534 - 1.1 8.2 5.9 1.1 8.2 5.9 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) GPR15L PF15854.5 ORF66137 - 0.077 13.2 1.1 0.096 12.9 0.3 1.6 2 0 0 2 2 2 0 G-protein coupled receptor ligand 15 DUF4916 PF16262.5 ORF65845 - 0.15 11.5 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) DUF4633 PF15464.6 ORF65457 - 0.019 15.1 0.3 0.025 14.7 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4633) EB PF01683.18 ORF65457 - 0.1 12.9 3.6 0.18 12.1 3.6 1.5 1 1 0 1 1 1 0 EB module DUF5082 PF16888.5 ORF63951 - 0.0024 18.1 1.5 0.0024 18.1 1.5 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF5082) TACC_C PF05010.14 ORF63951 - 0.0034 17.2 5.1 0.004 17.0 5.1 1.1 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal AphA_like PF14557.6 ORF63951 - 0.0053 16.5 0.5 0.0057 16.4 0.5 1.2 1 0 0 1 1 1 1 Putative AphA-like transcriptional regulator XhlA PF10779.9 ORF63951 - 0.035 14.3 3.3 0.18 12.0 2.4 2.3 2 0 0 2 2 2 0 Haemolysin XhlA DUF2209 PF09974.9 ORF63951 - 0.083 13.2 0.2 0.11 12.9 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2209) RRP36 PF06102.12 ORF63951 - 0.11 12.5 3.7 0.13 12.3 3.7 1.1 1 0 0 1 1 1 0 rRNA biogenesis protein RRP36 RasGAP_C PF03836.15 ORF63951 - 0.23 11.6 3.0 0.38 10.9 0.9 1.9 1 1 1 2 2 2 0 RasGAP C-terminus APG6_N PF17675.1 ORF63951 - 0.52 10.8 11.3 1.3 9.5 11.3 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region UPF0242 PF06785.11 ORF63951 - 0.57 10.3 5.4 0.71 10.0 5.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4140 PF13600.6 ORF63951 - 9.5 6.7 9.8 6.2 7.3 5.9 2.3 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF5539 PF17693.1 ORF63826 - 0.031 13.9 0.6 0.035 13.8 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5539) JAKMIP_CC3 PF16034.5 ORF63593 - 0.053 13.5 0.2 0.077 12.9 0.2 1.3 1 0 0 1 1 1 0 JAKMIP CC3 domain Kisspeptin PF15152.6 ORF63593 - 0.23 12.2 1.2 0.83 10.5 0.1 2.0 2 0 0 2 2 2 0 Kisspeptin O-antigen_lig PF13425.6 ORF61685 - 0.098 11.4 8.0 0.11 11.3 8.0 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Ank_2 PF12796.7 ORF58861 - 2.9e-15 56.6 0.0 1.3e-08 35.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF58861 - 4.4e-14 52.4 0.0 0.00012 22.3 0.0 3.3 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF58861 - 1.3e-10 41.5 0.0 5.5e-06 26.8 0.0 3.1 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF58861 - 5.7e-09 36.0 0.0 0.051 14.0 0.0 3.7 3 1 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF58861 - 1.4e-06 28.1 0.0 2 9.3 0.0 4.5 4 1 1 5 5 5 2 Ankyrin repeat DUF2101 PF09874.9 ORF58741 - 0.021 14.6 0.0 0.025 14.3 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) CAP_N PF01213.19 ORF58424 - 0.053 13.0 0.4 0.061 12.8 0.4 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal EF-hand_6 PF13405.6 ORF58424 - 0.16 12.0 0.0 0.31 11.1 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 ORF58424 - 0.28 10.8 1.3 0.45 10.2 1.3 1.4 1 0 0 1 1 1 0 EF hand Epimerase PF01370.21 ORF56930 - 1e-10 41.5 0.0 1.1e-10 41.4 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF56930 - 5.7e-10 39.1 0.0 6.6e-10 38.9 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 ORF56930 - 6.3e-07 28.7 0.0 7.3e-07 28.5 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 ORF56930 - 0.0014 17.8 0.1 0.0016 17.6 0.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF56930 - 0.0027 16.9 0.0 0.0049 16.1 0.0 1.4 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 ORF56930 - 0.022 13.8 0.0 0.029 13.5 0.0 1.3 1 1 0 1 1 1 0 RmlD substrate binding domain adh_short PF00106.25 ORF56930 - 0.027 13.9 0.0 0.043 13.3 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase Sortilin-Vps10 PF15902.5 ORF56805 - 0.077 11.8 0.0 0.077 11.8 0.0 1.1 1 0 0 1 1 1 0 Sortilin, neurotensin receptor 3, SERTA PF06031.13 ORF56419 - 0.37 10.5 2.0 1.2 8.8 0.9 2.2 2 0 0 2 2 2 0 SERTA motif DUF1604 PF07713.13 ORF56155 - 0.21 11.4 3.8 0.92 9.4 0.0 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1604) Homeobox_KN PF05920.11 ORF55592 - 1.5e-12 47.2 0.8 2.4e-12 46.5 0.8 1.3 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF55592 - 1.9e-06 27.6 0.5 3.4e-06 26.8 0.5 1.4 1 0 0 1 1 1 1 Homeodomain ACP_syn_III_C PF08541.10 ORF5462 - 0.077 13.2 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CP12 PF02672.15 ORF54306 - 0.083 13.7 1.5 0.083 13.7 1.5 1.9 2 0 0 2 2 2 0 CP12 domain RIIa PF02197.17 ORF53378 - 0.0056 16.3 0.3 0.02 14.6 0.0 2.0 2 0 0 2 2 2 1 Regulatory subunit of type II PKA R-subunit Aha1_N PF09229.11 ORF52697 - 1.1e-11 45.0 0.0 1.4e-11 44.8 0.0 1.0 1 0 0 1 1 1 1 Activator of Hsp90 ATPase, N-terminal RexA PF15969.5 ORF52697 - 0.12 12.0 0.0 0.21 11.1 0.0 1.5 2 0 0 2 2 2 0 Intracellular sensor of Lambda phage, Abi component Prefoldin_2 PF01920.20 ORF52061 - 1.5e-11 44.2 13.2 1.8e-11 43.9 13.2 1.1 1 0 0 1 1 1 1 Prefoldin subunit Dynamin_M PF01031.20 ORF52061 - 0.0012 18.2 1.9 0.0029 16.9 2.0 1.5 1 1 0 1 1 1 1 Dynamin central region DUF3958 PF13125.6 ORF52061 - 0.0035 17.5 7.4 0.0048 17.1 7.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3958) FTA4 PF13093.6 ORF52061 - 0.0059 16.5 4.0 0.0075 16.2 4.0 1.2 1 0 0 1 1 1 1 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 BLOC1_2 PF10046.9 ORF52061 - 0.019 15.2 8.2 0.15 12.4 1.0 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Spectrin PF00435.21 ORF52061 - 0.049 14.1 9.1 0.23 12.0 0.4 2.1 2 0 0 2 2 2 0 Spectrin repeat Fib_alpha PF08702.10 ORF52061 - 0.71 10.1 5.4 1 9.6 5.4 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family FliD_N PF02465.18 ORF52061 - 0.83 10.4 5.0 3 8.6 0.4 2.2 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Thioesterase PF00975.20 ORF52061 - 1.6 8.8 3.8 4.1 7.4 3.0 1.7 1 1 1 2 2 2 0 Thioesterase domain TMPIT PF07851.13 ORF52061 - 1.8 7.8 5.1 2.4 7.3 5.1 1.2 1 0 0 1 1 1 0 TMPIT-like protein Phage_lysis PF03245.13 ORF52061 - 2.4 8.3 7.1 16 5.7 0.1 2.1 2 0 0 2 2 2 0 Bacteriophage Rz lysis protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks180.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks180.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks180.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks180.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- BCL9 PF11502.8 ORF50124 - 0.11 12.3 0.0 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 B-cell lymphoma 9 protein Rep_fac_C PF08542.11 ORF4966 - 7.6e-14 51.9 0.3 1.1e-13 51.4 0.3 1.2 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA_assoc_2 PF16193.5 ORF4966 - 0.00059 20.1 0.0 0.0012 19.2 0.0 1.7 1 1 0 1 1 1 1 AAA C-terminal domain Ribosomal_S20p PF01649.18 ORF4966 - 0.13 12.9 0.4 0.24 12.1 0.4 1.3 1 0 0 1 1 1 0 Ribosomal protein S20 EF-hand_1 PF00036.32 ORF49492 - 3.1e-21 73.3 10.6 6e-07 28.6 1.5 3.2 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF49492 - 7.8e-20 70.5 7.2 5.4e-07 29.4 0.0 3.2 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_7 PF13499.6 ORF49492 - 1.7e-17 63.6 3.4 1.2e-10 41.7 2.5 2.3 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF49492 - 1e-15 56.3 7.0 2.9e-06 26.8 1.3 3.3 3 0 0 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 ORF49492 - 3.5e-15 54.7 11.1 2.5e-06 26.7 2.1 3.3 3 0 0 3 3 3 3 EF hand Caleosin PF05042.13 ORF49492 - 7e-06 26.1 4.0 0.1 12.5 0.4 3.0 1 1 2 3 3 3 2 Caleosin related protein SPARC_Ca_bdg PF10591.9 ORF49492 - 0.00013 22.2 0.3 0.00099 19.4 0.3 2.0 1 1 1 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF49492 - 0.00024 21.0 3.8 1.3 9.0 0.1 3.0 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 ORF49492 - 0.0024 18.0 2.0 0.72 10.1 0.0 2.8 2 1 1 3 3 3 2 Dockerin type I domain EF-hand_9 PF14658.6 ORF49492 - 0.0053 17.1 0.1 0.018 15.4 0.1 1.8 2 0 0 2 2 2 1 EF-hand domain EF-hand_11 PF08976.11 ORF49492 - 0.02 15.8 0.1 0.025 15.4 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain EF-hand_13 PF17958.1 ORF49492 - 0.025 14.3 0.0 0.11 12.4 0.0 2.0 2 1 1 3 3 3 0 EF-hand domain Herpes_UL36 PF03586.13 ORF49492 - 0.055 12.8 0.2 0.85 8.9 0.1 2.2 1 1 1 2 2 2 0 Herpesvirus UL36 tegument protein tRNA_synt_1c_R1 PF04558.15 ORF49492 - 0.066 13.2 0.1 0.11 12.5 0.1 1.4 1 1 1 2 2 2 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 Pkinase PF00069.25 ORF49084 - 0.00016 21.1 1.8 0.00021 20.7 0.2 1.8 2 0 0 2 2 2 1 Protein kinase domain FTA2 PF13095.6 ORF49084 - 0.1 12.2 0.2 0.43 10.2 0.2 2.0 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 zf-C2H2_12 PF18658.1 ORF48564 - 5.2 6.7 6.6 7.8 6.2 0.6 2.5 1 1 1 2 2 2 0 Zinc-finger C2H2-type Kelch_1 PF01344.25 ORF48480 - 8.9e-05 22.0 0.1 0.00033 20.2 0.0 2.0 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 ORF48480 - 0.041 13.9 0.0 0.16 12.0 0.0 2.0 2 0 0 2 2 2 0 Galactose oxidase, central domain SGL PF08450.12 ORF48480 - 0.045 13.3 0.1 0.06 12.9 0.1 1.2 1 0 0 1 1 1 0 SMP-30/Gluconolactonase/LRE-like region Tctex-1 PF03645.13 ORF48048 - 3.4e-24 85.1 1.1 3.9e-24 84.9 1.1 1.1 1 0 0 1 1 1 1 Tctex-1 family PSCyt2 PF07583.11 ORF48048 - 0.035 14.0 0.1 0.045 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1549) GvpO PF05800.11 ORF48048 - 0.044 13.8 0.1 0.063 13.3 0.1 1.2 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpO ERM PF00769.19 ORF46808 - 0.00055 19.8 0.9 0.00063 19.6 0.9 1.1 1 0 0 1 1 1 1 Ezrin/radixin/moesin family DUF2205 PF10224.9 ORF46808 - 0.013 15.5 5.7 0.02 14.9 5.7 1.3 1 0 0 1 1 1 0 Short coiled-coil protein TPD52 PF04201.15 ORF46808 - 1.8 8.1 7.5 10 5.7 7.5 1.9 1 1 0 1 1 1 0 Tumour protein D52 family Ank_5 PF13857.6 ORF46344 - 2.2e-19 69.2 5.7 2.9e-09 37.0 0.3 2.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF46344 - 1.8e-17 63.7 0.0 3.4e-12 46.8 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF46344 - 1.1e-16 60.9 1.8 3.6e-12 46.6 0.1 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF46344 - 3.1e-14 51.7 1.2 0.0022 18.3 0.1 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF46344 - 1.7e-11 44.0 3.2 0.0031 17.9 0.4 3.4 3 0 0 3 3 3 3 Ankyrin repeat SPATIAL PF15256.6 ORF45704 - 0.037 14.4 0.8 0.046 14.1 0.8 1.1 1 0 0 1 1 1 0 SPATIAL Tannase PF07519.11 ORF45704 - 0.27 10.1 1.0 0.33 9.8 1.0 1.1 1 0 0 1 1 1 0 Tannase and feruloyl esterase DHHC PF01529.20 ORF4495 - 7.5e-13 48.7 10.7 1.1e-12 48.2 7.4 2.0 2 0 0 2 2 2 1 DHHC palmitoyltransferase HA2 PF04408.23 ORF44783 - 5 7.5 5.6 4.5 7.6 4.5 1.6 1 1 0 1 1 1 0 Helicase associated domain (HA2) DOT1 PF08123.13 ORF44081 - 0.02 14.4 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 PSI_PsaE PF02427.17 ORF43940 - 3.7e-24 84.2 1.3 4.9e-24 83.8 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE PAM2 PF07145.15 ORF43436 - 0.0049 16.5 0.4 0.1 12.4 0.0 2.8 2 0 0 2 2 2 1 Ataxin-2 C-terminal region SPATIAL PF15256.6 ORF43387 - 0.037 14.4 0.8 0.046 14.1 0.8 1.1 1 0 0 1 1 1 0 SPATIAL Tannase PF07519.11 ORF43387 - 0.27 10.1 1.0 0.33 9.8 1.0 1.1 1 0 0 1 1 1 0 Tannase and feruloyl esterase TSC22 PF01166.18 ORF43327 - 0.00015 22.0 1.7 0.00015 22.0 1.7 1.5 2 0 0 2 2 2 1 TSC-22/dip/bun family KASH_CCD PF14662.6 ORF43327 - 0.0002 21.3 7.1 0.00023 21.0 7.1 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Shugoshin_N PF07558.11 ORF43327 - 0.00036 20.3 1.4 0.00079 19.2 1.4 1.7 1 0 0 1 1 1 1 Shugoshin N-terminal coiled-coil region YabA PF06156.13 ORF43327 - 0.00082 20.0 4.7 0.00082 20.0 4.7 1.3 1 1 0 1 1 1 1 Initiation control protein YabA DivIC PF04977.15 ORF43327 - 0.019 14.7 1.6 0.019 14.7 1.6 2.6 2 1 1 3 3 3 0 Septum formation initiator bZIP_1 PF00170.21 ORF43327 - 0.056 13.5 3.5 0.26 11.4 3.0 1.9 1 1 0 1 1 1 0 bZIP transcription factor DUF4094 PF13334.6 ORF43327 - 0.091 13.2 0.7 0.23 11.9 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) ZapB PF06005.12 ORF43327 - 0.34 11.4 6.1 0.17 12.3 3.8 1.7 1 1 1 2 2 2 0 Cell division protein ZapB DUF4916 PF16262.5 ORF43002 - 0.15 11.5 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) Ras PF00071.22 ORF42971 - 1.6e-46 157.8 0.7 1.9e-46 157.6 0.7 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF42971 - 8.6e-34 116.3 0.5 9.9e-34 116.1 0.5 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF42971 - 1.6e-14 53.7 0.2 1.8e-14 53.6 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF42971 - 5.3e-07 29.2 0.3 6.3e-07 29.0 0.3 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF42971 - 1.3e-05 25.2 0.1 1.5e-05 25.0 0.1 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF42971 - 0.0032 17.0 0.0 0.0057 16.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_22 PF13401.6 ORF42971 - 0.011 15.9 0.0 0.018 15.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 ORF42971 - 0.018 15.0 0.0 0.021 14.8 0.0 1.4 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 ORF42971 - 0.023 14.5 0.0 0.052 13.3 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF42971 - 0.032 14.1 0.1 0.09 12.7 0.0 1.8 1 1 1 2 2 2 0 RsgA GTPase SRPRB PF09439.10 ORF42971 - 0.035 13.5 0.0 0.042 13.3 0.0 1.1 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 ORF42971 - 0.066 13.6 0.0 0.078 13.4 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 ORF42971 - 0.096 12.8 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 ORF42971 - 0.11 11.9 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein Rdx PF10262.9 ORF42877 - 0.02 15.0 0.0 0.024 14.8 0.0 1.4 1 1 0 1 1 1 0 Rdx family Endothelin PF00322.17 ORF42877 - 0.2 11.3 0.4 0.4 10.3 0.1 1.7 2 0 0 2 2 2 0 Endothelin family AP2 PF00847.20 ORF42110 - 7.7 6.8 8.6 16 5.8 2.1 2.8 3 0 0 3 3 3 0 AP2 domain NifU_N PF01592.16 ORF41466 - 5.9e-58 194.6 0.2 6.4e-58 194.5 0.2 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain Ank_5 PF13857.6 ORF41041 - 2.2e-19 69.2 5.7 2.9e-09 37.0 0.3 2.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF41041 - 1.8e-17 63.7 0.0 3.4e-12 46.8 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF41041 - 1.1e-16 60.9 1.8 3.6e-12 46.6 0.1 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF41041 - 3.1e-14 51.7 1.2 0.0022 18.3 0.1 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF41041 - 1.7e-11 44.0 3.2 0.0031 17.9 0.4 3.4 3 0 0 3 3 3 3 Ankyrin repeat Tmemb_9 PF05434.11 ORF39614 - 0.0024 17.8 0.2 0.0032 17.4 0.2 1.2 1 0 0 1 1 1 1 TMEM9 NCU-G1 PF15065.6 ORF39614 - 0.0064 15.5 0.1 0.011 14.8 0.1 1.3 1 0 0 1 1 1 1 Lysosomal transcription factor, NCU-G1 m04gp34like PF12216.8 ORF39614 - 0.0086 15.7 1.0 0.0097 15.5 0.2 1.4 2 0 0 2 2 2 1 Immune evasion protein DUF4051 PF13260.6 ORF39614 - 0.017 14.9 2.9 0.039 13.7 2.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4051) ASFV_J13L PF05568.11 ORF39614 - 0.02 14.7 0.3 0.023 14.4 0.3 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Comm PF15957.5 ORF39614 - 0.026 14.9 0.0 0.034 14.5 0.0 1.2 1 0 0 1 1 1 0 Commissureless NB PF04159.13 ORF39614 - 0.034 14.2 0.5 0.13 12.3 0.0 1.9 2 0 0 2 2 2 0 NB glycoprotein Pox_A14 PF05767.12 ORF39614 - 0.04 14.1 0.1 0.055 13.6 0.1 1.3 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 EphA2_TM PF14575.6 ORF39614 - 0.045 14.6 0.1 0.066 14.1 0.1 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain SARAF PF06682.12 ORF39614 - 0.058 13.0 0.0 0.06 13.0 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis DUF3328 PF11807.8 ORF39614 - 0.06 13.1 0.0 0.076 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) Ac76 PF05814.11 ORF39614 - 0.073 13.1 0.7 0.073 13.1 0.7 1.7 2 0 0 2 2 2 0 Orf76 (Ac76) DUF3357 PF11837.8 ORF39614 - 0.14 12.6 0.1 0.2 12.1 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3357) DUF818 PF05677.12 ORF39614 - 0.18 10.8 3.1 0.27 10.2 3.1 1.3 1 1 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) DUF2621 PF11084.8 ORF39614 - 0.3 11.1 1.4 0.47 10.4 1.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2621) DUF4834 PF16118.5 ORF39614 - 0.32 12.0 1.7 0.51 11.3 1.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DUF3139 PF11337.8 ORF39614 - 0.76 10.5 7.6 2.2 9.0 7.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) Orf78 PF06024.12 ORF39614 - 6.5 7.1 10.1 0.5 10.7 4.2 1.9 1 1 1 2 2 2 0 Orf78 (ac78) HRG PF16954.5 ORF39614 - 6.5 7.2 8.4 13 6.3 8.4 1.4 1 0 0 1 1 1 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene Glyco_hydro_59 PF02057.15 ORF38713 - 0.00037 19.8 0.1 0.00039 19.7 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 59 CK_II_beta PF01214.18 ORF38713 - 1.5 8.6 7.7 1.9 8.3 6.6 1.6 1 1 1 2 2 2 0 Casein kinase II regulatory subunit Ac110_PIF PF07280.11 ORF38428 - 0.13 12.0 2.0 0.27 11.0 2.0 1.5 1 0 0 1 1 1 0 Per os infectivity factor AC110 Prenyltrans PF00432.21 ORF36688 - 4.5e-37 125.5 0.2 2.3e-13 49.6 0.2 3.0 3 0 0 3 3 3 3 Prenyltransferase and squalene oxidase repeat DUF2093 PF09866.9 ORF36688 - 1.1 8.7 3.5 10 5.7 3.5 2.1 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2093) AMP-binding_C PF13193.6 ORF3607 - 6.1e-08 33.5 0.0 9.6e-08 32.9 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain CAAX_1 PF15895.5 ORF35515 - 2.9e-05 24.1 2.3 3.4e-05 23.8 2.3 1.1 1 0 0 1 1 1 1 CAAX box cerebral protein 1 DrsE PF02635.15 ORF34568 - 3.5e-29 101.6 0.0 4e-29 101.3 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family ALG3 PF05208.13 ORF34129 - 2.2e-16 60.3 6.2 2.4e-16 60.1 6.2 1.0 1 0 0 1 1 1 1 ALG3 protein Ferlin_C PF16165.5 ORF33106 - 0.00013 21.9 0.0 0.00015 21.8 0.0 1.1 1 0 0 1 1 1 1 Ferlin C-terminus Arrestin_N PF00339.29 ORF3238 - 0.0013 18.9 0.1 0.0016 18.5 0.1 1.3 1 1 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Peptidase_M24 PF00557.24 ORF31350 - 2.5e-05 24.1 0.1 2.8e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 GARS_A PF01071.19 ORF31350 - 0.029 14.2 0.0 0.033 14.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MerR PF00376.23 ORF3029 - 0.03 14.1 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 MerR family regulatory protein DUF5082 PF16888.5 ORF3029 - 0.096 13.0 4.0 0.085 13.1 3.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Ank_4 PF13637.6 ORF30056 - 2.7e-11 43.8 0.4 3.6e-08 33.8 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF30056 - 3.3e-11 43.2 0.4 7.6e-11 42.0 0.2 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF30056 - 3.4e-11 43.6 0.0 6.3e-11 42.7 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF30056 - 2.5e-09 37.2 0.2 9.8e-07 29.0 0.1 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF30056 - 2.8e-09 36.5 0.2 4.9e-06 26.5 0.1 3.3 2 1 0 2 2 2 1 Ankyrin repeat Cas_Cas5d PF09704.10 ORF30056 - 0.031 14.2 0.0 0.033 14.1 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas5) ribosomal_L24 PF17136.4 ORF29985 - 1.6e-10 41.2 0.0 2.9e-10 40.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 HTH_CodY PF08222.11 ORF29633 - 0.033 13.7 0.1 8.3 6.0 0.1 2.3 2 0 0 2 2 2 0 CodY helix-turn-helix domain COPIIcoated_ERV PF07970.12 ORF29367 - 2.2e-05 24.4 0.1 2.7e-05 24.1 0.1 1.1 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter Glu-tRNAGln PF02686.15 ORF29367 - 0.16 12.3 0.1 0.22 11.8 0.1 1.2 1 0 0 1 1 1 0 Glu-tRNAGln amidotransferase C subunit QRPTase_C PF01729.19 ORF29011 - 3e-33 115.0 0.0 3.3e-33 114.8 0.0 1.0 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain DOT1 PF08123.13 ORF27012 - 0.02 14.4 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 Pkinase PF00069.25 ORF26860 - 1.6e-21 76.9 0.2 1.8e-21 76.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF26860 - 4e-12 46.0 0.2 4.9e-12 45.7 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase PALP PF00291.25 ORF26788 - 0.0042 16.5 0.0 0.0054 16.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF3918 PF13056.6 ORF26198 - 0.012 15.2 0.1 0.02 14.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) ubiquitin PF00240.23 ORF23832 - 7.3e-34 115.4 0.3 9.5e-34 115.0 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin family Ribosomal_L40e PF01020.17 ORF23832 - 2.3e-30 104.2 11.5 3.5e-30 103.6 11.5 1.3 1 0 0 1 1 1 1 Ribosomal L40e family Rad60-SLD PF11976.8 ORF23832 - 8.8e-16 57.5 0.7 1.2e-15 57.1 0.7 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF23832 - 3.8e-05 24.1 0.1 0.00015 22.1 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF23832 - 0.0049 16.8 0.0 0.007 16.3 0.0 1.3 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF23832 - 0.0059 16.9 0.0 0.0097 16.2 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF23832 - 0.011 15.8 0.0 0.022 14.9 0.0 1.6 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF23832 - 0.026 14.6 1.1 6.6 6.8 0.0 2.2 2 0 0 2 2 2 0 Ubiquitin-like domain DUF2407 PF10302.9 ORF23832 - 0.031 14.8 0.1 0.035 14.7 0.1 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Amidinotransf PF02274.17 ORF23550 - 1.1e-32 113.5 1.8 1.2e-32 113.4 1.8 1.0 1 0 0 1 1 1 1 Amidinotransferase ILEI PF15711.5 ORF22440 - 3.4e-20 72.3 0.0 4.3e-20 72.0 0.0 1.1 1 0 0 1 1 1 1 Interleukin-like EMT inducer RPN7 PF10602.9 ORF22226 - 2.5e-21 76.2 2.8 2.7e-21 76.0 2.8 1.0 1 0 0 1 1 1 1 26S proteasome subunit RPN7 LMBR1 PF04791.16 ORF22226 - 0.016 14.1 0.5 0.019 13.9 0.5 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein BAR_3 PF16746.5 ORF22226 - 0.049 13.3 0.3 0.049 13.3 0.3 2.3 1 1 2 3 3 3 0 BAR domain of APPL family V-SNARE PF05008.15 ORF22226 - 0.11 12.9 2.0 0.6 10.5 1.0 2.4 2 1 0 2 2 2 0 Vesicle transport v-SNARE protein N-terminus BST2 PF16716.5 ORF22226 - 0.62 10.7 2.9 2.7 8.6 1.8 2.1 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 CD225 PF04505.12 ORF22058 - 0.014 15.6 0.5 0.36 11.0 0.0 2.4 2 0 0 2 2 2 0 Interferon-induced transmembrane protein His_Phos_2 PF00328.22 ORF21675 - 0.02 14.3 0.0 0.031 13.7 0.0 1.3 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) DUF3576 PF12100.8 ORF19867 - 0.17 12.0 3.2 4.3 7.5 0.9 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3576) COPIIcoated_ERV PF07970.12 ORF19515 - 5e-15 56.0 2.8 5.5e-15 55.8 2.8 1.0 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter SYCP2_ARLD PF18581.1 ORF18846 - 0.027 14.5 0.2 0.031 14.3 0.2 1.1 1 0 0 1 1 1 0 Synaptonemal complex 2 armadillo-repeat-like domain V-SNARE_C PF12352.8 ORF18846 - 0.089 13.1 0.2 0.2 12.0 0.1 1.6 1 1 1 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus Ser_hydrolase PF06821.13 ORF1781 - 2.2e-06 27.6 0.0 3.7e-06 26.9 0.0 1.3 1 1 0 1 1 1 1 Serine hydrolase Abhydrolase_6 PF12697.7 ORF1781 - 2.5e-06 28.3 2.2 0.00096 19.8 0.9 2.0 1 1 1 2 2 2 2 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF1781 - 0.031 13.6 0.0 1.8 7.7 0.1 2.0 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF1781 - 0.033 13.8 0.1 0.98 9.0 0.1 2.0 1 1 0 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 ORF1781 - 0.036 13.9 0.0 0.12 12.2 0.0 1.7 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase DUF3089 PF11288.8 ORF1781 - 0.23 11.0 0.1 0.34 10.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) Retro_M PF02813.14 ORF17661 - 0.019 15.4 0.6 0.033 14.6 0.2 1.6 1 1 0 1 1 1 0 Retroviral M domain DUF4229 PF14012.6 ORF15182 - 0.37 10.9 6.1 0.79 9.9 6.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) PARP PF00644.20 ORF14374 - 7.6e-24 84.4 2.9 5.3e-22 78.4 2.9 2.0 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Tox-ART-HYD1 PF15633.6 ORF14374 - 0.03 15.0 0.7 0.033 14.9 0.0 1.5 2 0 0 2 2 2 0 HYD1 signature containing ADP-ribosyltransferase ATP1G1_PLM_MAT8 PF02038.16 ORF14322 - 0.051 13.0 0.3 0.11 12.0 0.0 1.7 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family Epimerase PF01370.21 ORF14240 - 9.8e-11 41.6 0.0 1.1e-10 41.4 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF14240 - 8.7e-10 38.5 0.0 1e-09 38.3 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 ORF14240 - 2.9e-07 29.8 0.0 3.3e-07 29.6 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 ORF14240 - 0.0025 17.0 0.1 0.003 16.8 0.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF14240 - 0.0051 16.0 0.0 0.0095 15.1 0.0 1.4 1 1 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 ORF14240 - 0.026 13.6 0.0 0.03 13.4 0.0 1.3 1 1 0 1 1 1 0 RmlD substrate binding domain Glyco_hydro_59 PF02057.15 ORF14240 - 0.049 12.8 0.0 0.055 12.7 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 DDRGK PF09756.9 ORF13834 - 2.4 7.7 12.5 3.1 7.4 12.5 1.2 1 0 0 1 1 1 0 DDRGK domain Casc1_N PF15927.5 ORF13834 - 2.8 7.6 14.2 3.8 7.1 14.2 1.2 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus DUF4709 PF15821.5 ORF11646 - 0.011 16.0 1.7 0.011 16.0 1.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4709) CcdA PF07362.12 ORF11646 - 0.15 12.5 2.3 0.36 11.3 1.3 1.9 2 0 0 2 2 2 0 Post-segregation antitoxin CcdA MatE PF01554.18 ORF11465 - 5.9e-05 22.8 7.3 5.9e-05 22.8 7.3 1.7 2 0 0 2 2 2 1 MatE Polysacc_synt_C PF14667.6 ORF11465 - 0.0018 18.3 7.5 0.0032 17.5 7.5 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain DUF5522 PF17653.1 ORF112401 - 3 7.9 6.7 6.6 6.8 6.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5522) PSI_PsaE PF02427.17 ORF111705 - 3.7e-24 84.2 1.3 4.9e-24 83.8 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE 2OG-FeII_Oxy_3 PF13640.6 ORF111369 - 2.1e-19 70.2 0.1 2.7e-19 69.9 0.1 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF111369 - 7.4e-07 29.8 0.0 9.5e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF111369 - 9.4e-05 22.8 0.0 0.00012 22.6 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 ORF111369 - 0.0068 16.8 0.0 0.0087 16.5 0.0 1.5 1 1 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase Methyltransf_2 PF00891.18 ORF110571 - 0.01 15.1 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 0 O-methyltransferase domain Methyltransf_12 PF08242.12 ORF110571 - 0.011 16.5 0.0 0.02 15.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PSI_PsaE PF02427.17 ORF109675 - 3.7e-24 84.2 1.3 4.9e-24 83.8 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE GRDP-like PF07173.12 ORF108872 - 1.1 10.0 6.0 4.7 7.9 0.1 2.2 1 1 1 2 2 2 0 Glycine-rich domain-containing protein-like TraB PF01963.17 ORF108626 - 8.5e-09 35.7 0.1 1.1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 TraB family Cofac_haem_bdg PF04187.13 ORF108626 - 0.00073 19.6 0.1 0.00083 19.4 0.1 1.1 1 0 0 1 1 1 1 Haem-binding uptake, Tiki superfamily, ChaN Erythro_esteras PF05139.14 ORF108626 - 0.025 14.4 0.0 0.026 14.3 0.0 1.1 1 0 0 1 1 1 0 Erythromycin esterase TetR_C_16 PF17920.1 ORF108626 - 0.048 13.9 2.4 0.088 13.1 0.6 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Pkinase PF00069.25 ORF107572 - 3.2e-06 26.7 0.0 3.9e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DUF3837 PF12939.7 ORF107572 - 0.14 12.6 0.2 0.33 11.4 0.1 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3837) ZYG-11_interact PF05884.12 ORF107327 - 0.056 12.9 0.1 0.07 12.5 0.1 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 ArsP_1 PF03773.13 ORF106842 - 0.22 10.6 0.0 0.29 10.2 0.0 1.1 1 0 0 1 1 1 0 Predicted permease NfeD PF01957.18 ORF106824 - 1.5e-17 63.7 0.1 1.5e-17 63.7 0.1 1.6 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding DUF4131 PF13567.6 ORF106824 - 0.00092 18.9 0.7 0.0012 18.6 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) MFS_1 PF07690.16 ORF106824 - 0.0025 16.8 1.4 0.0028 16.6 1.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Phage_holin_3_6 PF07332.11 ORF106824 - 0.0048 16.9 1.3 0.0061 16.6 1.3 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III UbiA PF01040.18 ORF106824 - 0.0065 15.8 2.2 0.0086 15.4 2.2 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family ABC_membrane PF00664.23 ORF106824 - 0.031 13.9 0.0 0.039 13.6 0.0 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region RseC_MucC PF04246.12 ORF106824 - 0.091 12.7 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Peptidase_U4 PF03419.13 ORF106824 - 0.16 11.3 0.2 0.19 11.0 0.2 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA DUF3093 PF11292.8 ORF106824 - 0.4 10.9 6.2 0.68 10.2 6.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3093) UCH PF00443.29 ORF106700 - 2.4e-23 82.9 0.2 2.7e-23 82.8 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF106700 - 1.2e-06 28.4 0.7 2.3e-06 27.5 0.7 1.4 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase TMEM173 PF15009.6 ORF106700 - 0.011 14.9 0.5 0.038 13.2 0.1 1.8 1 1 1 2 2 2 0 Transmembrane protein 173 Penicil_amidase PF01804.18 ORF106344 - 1.6e-06 27.4 0.0 1.7e-06 27.3 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase DUF4360 PF14273.6 ORF106344 - 0.077 12.9 0.0 0.095 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4360) KH_1 PF00013.29 ORF106277 - 2.4e-17 62.5 0.2 3.9e-17 61.8 0.2 1.4 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF106277 - 0.00031 20.5 0.2 0.00054 19.7 0.2 1.6 1 1 0 1 1 1 1 KH domain NINJA_B PF16136.5 ORF106169 - 0.0045 17.4 5.7 0.0055 17.1 5.7 1.3 1 0 0 1 1 1 1 Putative nuclear localisation signal Sin_N PF04801.13 ORF106169 - 0.037 13.3 6.6 0.039 13.2 6.6 1.1 1 0 0 1 1 1 0 Sin-like protein conserved region Connexin PF00029.19 ORF106169 - 0.038 13.8 2.7 0.045 13.5 2.7 1.1 1 0 0 1 1 1 0 Connexin Pox_Ag35 PF03286.14 ORF106169 - 0.092 12.5 7.4 0.12 12.2 7.4 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Pannexin_like PF12534.8 ORF106169 - 0.18 10.9 0.7 0.2 10.7 0.7 1.0 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 DUF2828 PF11443.8 ORF106169 - 0.29 9.2 4.4 0.29 9.2 4.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) CDC45 PF02724.14 ORF106169 - 0.37 9.0 9.2 0.34 9.2 9.2 1.0 1 0 0 1 1 1 0 CDC45-like protein Presenilin PF01080.17 ORF106169 - 2.1 7.0 5.6 2.2 7.0 5.6 1.1 1 0 0 1 1 1 0 Presenilin RNA_pol_Rpc4 PF05132.14 ORF106169 - 6.8 7.1 8.1 9.5 6.6 8.1 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF1272 PF06906.11 ORF104682 - 0.87 9.7 5.8 0.16 12.0 1.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Longin PF13774.6 ORF104160 - 9e-05 22.4 0.0 0.00014 21.8 0.0 1.3 1 0 0 1 1 1 1 Regulated-SNARE-like domain TPR_2 PF07719.17 ORF103878 - 0.0042 17.1 1.5 0.011 15.8 0.6 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF103878 - 0.013 15.7 0.4 0.036 14.3 0.4 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF103878 - 0.034 14.8 1.3 5.9 7.7 0.2 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF103878 - 0.12 12.4 0.8 0.39 10.9 0.6 2.0 1 1 0 1 1 1 0 Tetratricopeptide repeat PHM7_cyt PF14703.6 ORF103834 - 1.7e-11 44.7 0.8 3e-11 43.9 0.1 1.6 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter Methyltransf_11 PF08241.12 ORF103834 - 0.084 13.5 0.0 0.12 13.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ank PF00023.30 ORF103711 - 1.1e-14 54.1 0.2 1.3e-06 28.6 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF103711 - 3.2e-13 50.1 0.0 4.9e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF103711 - 1.2e-12 47.8 0.2 9.7e-08 32.1 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF103711 - 5.5e-12 46.0 0.0 8.9e-12 45.3 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF103711 - 1.4e-10 40.4 0.1 2.2e-05 24.5 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat DUF3792 PF12670.7 ORF103038 - 0.78 9.9 8.7 1 9.6 8.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) Aa_trans PF01490.18 NODE_49334_length_379_cov_1.517442_g41447_i0forward_frame_1 - 1.3e-06 27.4 4.2 1.4e-06 27.3 4.2 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Mem_trans PF03547.18 NODE_49334_length_379_cov_1.517442_g41447_i0forward_frame_1 - 0.0027 16.2 1.8 0.0029 16.1 1.8 1.0 1 0 0 1 1 1 1 Membrane transport protein DUF4282 PF14110.6 NODE_49323_length_379_cov_2.377907_g41436_i0reverse_frame_1 - 0.0093 16.7 0.0 0.012 16.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4282) ERGIC_N PF13850.6 NODE_49323_length_379_cov_2.377907_g41436_i0reverse_frame_1 - 0.034 14.5 0.6 0.045 14.1 0.6 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF948 PF06103.11 NODE_49323_length_379_cov_2.377907_g41436_i0reverse_frame_1 - 0.07 13.4 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF5547 PF17701.1 NODE_49323_length_379_cov_2.377907_g41436_i0reverse_frame_1 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5547) CDC27 PF09507.10 NODE_49322_length_379_cov_2.392442_g41435_i0reverse_frame_1 - 2.7 7.3 23.1 4.2 6.6 23.1 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Toxin_15 PF07906.13 NODE_49319_length_379_cov_2.502907_g41432_i0forward_frame_1 - 2.7e-12 46.9 0.1 3.3e-12 46.6 0.1 1.1 1 0 0 1 1 1 1 ShET2 enterotoxin, N-terminal region PaRep2a PF07903.11 NODE_49318_length_379_cov_2.523256_g41431_i0reverse_frame_1 - 0.025 14.4 0.4 0.033 14.0 0.4 1.2 1 0 0 1 1 1 0 PaRep2a protein DnaG_DnaB_bind PF08278.11 NODE_49315_length_379_cov_2.953488_g41428_i0reverse_frame_1 - 7.7e-24 84.7 0.0 1e-23 84.2 0.0 1.2 1 0 0 1 1 1 1 DNA primase DnaG DnaB-binding DUF3915 PF13054.6 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_1 - 0.0091 16.0 0.2 0.011 15.7 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) FAM27 PF15832.5 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_1 - 0.014 15.9 3.8 0.014 15.9 3.8 2.9 4 0 0 4 4 4 0 FAM27 D and E protein family Holin_9 PF16936.5 NODE_49310_length_379_cov_3.601744_g41423_i0reverse_frame_1 - 0.092 12.9 0.1 0.15 12.3 0.1 1.5 1 0 0 1 1 1 0 Putative holin Pkinase PF00069.25 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_1 - 3.2e-23 82.4 1.0 3.6e-23 82.3 1.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_1 - 1.4e-16 60.5 0.3 1.6e-16 60.4 0.3 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_1 - 0.026 13.3 0.6 0.024 13.4 0.6 1.3 1 1 0 1 1 1 0 Fungal protein kinase Abi_2 PF07751.11 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_1 - 0.066 13.5 0.2 0.076 13.3 0.2 1.1 1 0 0 1 1 1 0 Abi-like protein HPS3_Mid PF14762.6 NODE_49289_length_379_cov_103.261628_g41402_i0reverse_frame_1 - 0.093 11.5 0.5 0.099 11.4 0.5 1.1 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3, middle region PAN_3 PF08277.12 NODE_49276_length_379_cov_214.063953_g41389_i0forward_frame_1 - 0.049 13.4 3.4 0.069 13.0 3.4 1.3 1 0 0 1 1 1 0 PAN-like domain PAN_2 PF08276.11 NODE_49276_length_379_cov_214.063953_g41389_i0forward_frame_1 - 0.081 13.0 5.5 0.16 12.1 5.5 1.7 1 0 0 1 1 1 0 PAN-like domain PAN_4 PF14295.6 NODE_49276_length_379_cov_214.063953_g41389_i0forward_frame_1 - 0.5 10.3 9.2 0.3 11.0 5.9 2.3 2 1 0 2 2 2 0 PAN domain NtCtMGAM_N PF16863.5 NODE_49275_length_379_cov_248.345930_g41388_i0reverse_frame_1 - 0.0041 17.3 0.5 0.0056 16.9 0.5 1.3 1 0 0 1 1 1 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase Histone_H2A_C PF16211.5 NODE_49271_length_379_cov_315.906977_g41384_i0reverse_frame_1 - 2.7 7.8 5.4 4.3 7.2 5.4 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Gemini_C4 PF01492.17 NODE_49269_length_379_cov_435.311047_g41382_i0forward_frame_1 - 0.05 13.5 0.1 0.11 12.4 0.0 1.5 1 1 1 2 2 2 0 Geminivirus C4 protein Bim_N PF06773.11 NODE_49269_length_379_cov_435.311047_g41382_i0forward_frame_1 - 0.12 12.0 0.4 0.26 11.0 0.4 1.5 1 0 0 1 1 1 0 Bim protein N-terminus RRM_1 PF00076.22 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 6e-22 77.2 6.2 1.2e-12 47.4 0.2 2.7 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 2.9e-05 24.1 0.1 0.016 15.3 0.1 2.2 2 0 0 2 2 2 2 RNA recognition motif RRM_3 PF08777.11 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.00021 21.3 3.5 0.085 12.9 0.2 2.7 1 1 1 2 2 2 2 RNA binding motif PHM7_cyt PF14703.6 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.00027 21.2 0.4 0.022 15.0 0.1 2.1 1 1 1 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter RNA_bind PF08675.11 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.0044 17.0 0.1 6.6 6.8 0.0 3.0 1 1 1 2 2 2 2 RNA binding domain Nup35_RRM_2 PF14605.6 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.0055 16.7 0.1 0.71 9.9 0.0 2.5 2 0 0 2 2 2 1 Nup53/35/40-type RNA recognition motif MmoB_DmpM PF02406.17 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.067 13.4 0.1 0.26 11.5 0.0 1.9 2 0 0 2 2 2 0 MmoB/DmpM family RL PF17797.1 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.078 12.9 0.1 0.55 10.2 0.0 2.2 3 0 0 3 3 3 0 RL domain AA_permease PF00324.21 NODE_49248_length_380_cov_2.179710_g41362_i0forward_frame_1 - 2.8e-36 125.1 16.9 3e-36 125.0 16.9 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_49248_length_380_cov_2.179710_g41362_i0forward_frame_1 - 3.8e-08 32.6 18.1 4.4e-08 32.4 18.1 1.0 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 NODE_49248_length_380_cov_2.179710_g41362_i0forward_frame_1 - 0.00024 20.0 9.5 0.00028 19.8 9.5 1.0 1 0 0 1 1 1 1 Spore germination protein ParB PF08775.10 NODE_49234_length_380_cov_3.898551_g41348_i0forward_frame_1 - 0.11 13.0 0.8 0.14 12.6 0.8 1.3 1 1 0 1 1 1 0 ParB family MFS_1 PF07690.16 NODE_49212_length_380_cov_74.730435_g41326_i0forward_frame_1 - 0.0013 17.8 0.0 0.0014 17.6 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily CD20 PF04103.15 NODE_49212_length_380_cov_74.730435_g41326_i0forward_frame_1 - 0.015 15.4 0.1 0.018 15.1 0.1 1.2 1 0 0 1 1 1 0 CD20-like family Tetraspanin PF00335.20 NODE_49212_length_380_cov_74.730435_g41326_i0forward_frame_1 - 0.029 14.1 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Tetraspanin family PhyH PF05721.13 NODE_49208_length_380_cov_80.368116_g41322_i0reverse_frame_1 - 0.012 15.9 0.0 0.017 15.4 0.0 1.3 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) PhoR PF11808.8 NODE_49203_length_380_cov_96.602899_g41317_i0forward_frame_1 - 0.05 14.0 0.0 0.085 13.3 0.0 1.3 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR DUF3325 PF11804.8 NODE_49202_length_380_cov_125.043478_g41316_i0forward_frame_1 - 0.11 12.6 1.1 0.12 12.5 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3325) ESR1_C PF12743.7 NODE_49193_length_380_cov_206.544928_g41307_i0reverse_frame_1 - 0.077 12.8 0.9 0.14 12.0 0.9 1.4 1 0 0 1 1 1 0 Oestrogen-type nuclear receptor final C-terminal LSM PF01423.22 NODE_49190_length_380_cov_275.698551_g41304_i0forward_frame_1 - 0.0099 15.6 0.1 0.015 14.9 0.1 1.3 1 0 0 1 1 1 1 LSM domain MerR PF00376.23 NODE_49186_length_380_cov_601.750725_g41300_i0forward_frame_1 - 0.073 12.9 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 MerR family regulatory protein Enkurin PF13864.6 NODE_49185_length_380_cov_1156.411594_g41299_i0forward_frame_1 - 1.9e-20 73.1 10.8 2.3e-20 72.8 10.8 1.1 1 0 0 1 1 1 1 Calmodulin-binding Synaphin PF05835.12 NODE_49185_length_380_cov_1156.411594_g41299_i0forward_frame_1 - 0.012 15.9 8.8 0.014 15.7 8.8 1.1 1 0 0 1 1 1 0 Synaphin protein DUF1493 PF07377.12 NODE_49185_length_380_cov_1156.411594_g41299_i0forward_frame_1 - 0.021 15.3 0.7 0.029 14.8 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) DUF2157 PF09925.9 NODE_49182_length_380_cov_2565.820290_g41296_i0reverse_frame_1 - 0.0056 16.5 2.7 0.0078 16.0 2.7 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2157) LEP503 PF15221.6 NODE_49182_length_380_cov_2565.820290_g41296_i0reverse_frame_1 - 0.88 9.9 10.3 1.8 9.0 10.3 1.6 1 1 0 1 1 1 0 Lens epithelial cell protein LEP503 Sporozoite_P67 PF05642.11 NODE_49182_length_380_cov_2565.820290_g41296_i0reverse_frame_1 - 1.5 6.8 2.6 1.4 6.9 2.6 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen EIIC-GAT PF03611.14 NODE_49174_length_381_cov_2.216763_g41288_i0reverse_frame_1 - 8.5e-23 81.1 10.4 9.2e-23 81.0 10.4 1.0 1 0 0 1 1 1 1 PTS system sugar-specific permease component AzlD PF05437.12 NODE_49174_length_381_cov_2.216763_g41288_i0reverse_frame_1 - 0.018 15.2 5.4 0.018 15.2 5.4 1.7 2 0 0 2 2 2 0 Branched-chain amino acid transport protein (AzlD) TGFb_propeptide PF00688.18 NODE_49174_length_381_cov_2.216763_g41288_i0forward_frame_1 - 0.0048 16.7 0.2 0.0054 16.5 0.2 1.1 1 0 0 1 1 1 1 TGF-beta propeptide TMEM43 PF07787.12 NODE_49169_length_381_cov_2.459538_g41283_i0forward_frame_1 - 6.5 6.1 6.0 8.1 5.7 6.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 PRIMA1 PF16101.5 NODE_49155_length_381_cov_9.106936_g41269_i0reverse_frame_1 - 0.071 13.1 3.8 0.096 12.7 3.8 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 JTB PF05439.12 NODE_49153_length_381_cov_47.017341_g41267_i0forward_frame_1 - 0.017 15.2 4.4 0.023 14.7 4.4 1.3 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) 7TM_GPCR_Srx PF10328.9 NODE_49146_length_381_cov_66.505780_g41260_i0reverse_frame_1 - 0.094 12.3 11.9 0.1 12.2 11.9 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srx SUKH_6 PF14568.6 NODE_49141_length_381_cov_73.485549_g41255_i0forward_frame_1 - 0.013 15.9 0.3 0.017 15.5 0.3 1.2 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall PIG-Y PF15159.6 NODE_49138_length_381_cov_75.748555_g41252_i0reverse_frame_1 - 0.0032 18.4 1.4 0.0045 17.9 1.4 1.3 1 0 0 1 1 1 1 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y Sec20 PF03908.13 NODE_49138_length_381_cov_75.748555_g41252_i0reverse_frame_1 - 0.035 14.0 2.6 0.083 12.8 2.6 1.6 1 1 0 1 1 1 0 Sec20 Ank_2 PF12796.7 NODE_49125_length_381_cov_104.132948_g41240_i0reverse_frame_1 - 2e-19 70.0 1.9 1.1e-15 57.9 0.2 1.7 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_49125_length_381_cov_104.132948_g41240_i0reverse_frame_1 - 1.3e-14 54.4 0.9 3.9e-06 27.3 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_49125_length_381_cov_104.132948_g41240_i0reverse_frame_1 - 4.8e-14 52.3 1.6 8.2e-05 22.8 0.3 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_49125_length_381_cov_104.132948_g41240_i0reverse_frame_1 - 4e-11 42.8 2.2 7.5e-05 23.0 0.0 3.5 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 NODE_49125_length_381_cov_104.132948_g41240_i0reverse_frame_1 - 7.2e-08 32.1 0.2 0.0068 16.8 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat DUF1151 PF06625.11 NODE_49122_length_381_cov_108.921965_g41237_i0reverse_frame_1 - 0.05 13.5 0.5 0.13 12.2 0.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1151) MORN PF02493.20 NODE_49107_length_381_cov_278.757225_g41222_i0reverse_frame_1 - 1.6e-15 56.0 20.5 5.3e-07 29.2 1.2 3.8 4 0 0 4 4 4 3 MORN repeat CbiX PF01903.17 NODE_49105_length_381_cov_485.173410_g41220_i0reverse_frame_1 - 0.036 14.4 0.0 0.043 14.2 0.0 1.2 1 0 0 1 1 1 0 CbiX Thymidylat_synt PF00303.19 NODE_49105_length_381_cov_485.173410_g41220_i0reverse_frame_1 - 0.13 11.4 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 Thymidylate synthase DUF4645 PF15488.6 NODE_49090_length_382_cov_2.452450_g41205_i0forward_frame_3 - 0.0021 17.6 0.1 0.0021 17.6 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4645) SUR7 PF06687.12 NODE_49090_length_382_cov_2.452450_g41205_i0forward_frame_2 - 0.029 14.0 0.0 0.031 13.9 0.0 1.1 1 0 0 1 1 1 0 SUR7/PalI family Peptidase_S28 PF05577.12 NODE_49087_length_382_cov_2.671470_g41202_i0reverse_frame_2 - 0.012 14.4 0.8 0.016 14.0 0.8 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 NPR3 PF03666.13 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_3 - 5 5.8 5.0 5.3 5.7 5.0 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 RR_TM4-6 PF06459.12 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_2 - 5.3 6.8 8.8 5.8 6.7 8.8 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF1415 PF07209.12 NODE_49086_length_382_cov_2.671470_g41201_i0forward_frame_3 - 0.13 12.0 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1415) MS_channel PF00924.18 NODE_49086_length_382_cov_2.671470_g41201_i0forward_frame_3 - 5 6.6 6.6 6.4 6.3 6.6 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel UBA_4 PF14555.6 NODE_49084_length_382_cov_2.982709_g41199_i0reverse_frame_2 - 0.0023 17.7 0.1 0.0036 17.1 0.1 1.3 1 0 0 1 1 1 1 UBA-like domain DUF1493 PF07377.12 NODE_49084_length_382_cov_2.982709_g41199_i0reverse_frame_2 - 0.068 13.6 0.1 0.083 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) TAP_C PF03943.13 NODE_49084_length_382_cov_2.982709_g41199_i0reverse_frame_2 - 0.11 12.2 0.0 0.33 10.6 0.0 1.8 2 0 0 2 2 2 0 TAP C-terminal domain Response_reg PF00072.24 NODE_49083_length_382_cov_3.069164_g41198_i0forward_frame_2 - 3.2e-18 65.9 0.0 4e-18 65.6 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 NODE_49083_length_382_cov_3.069164_g41198_i0forward_frame_2 - 0.099 12.7 1.0 0.24 11.5 0.1 2.1 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal PTEN_C2 PF10409.9 NODE_49081_length_382_cov_3.342939_g41196_i0forward_frame_2 - 0.047 13.4 0.1 0.064 13.0 0.1 1.1 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein DUF440 PF04269.12 NODE_49077_length_382_cov_3.795389_g41192_i0forward_frame_2 - 5.8e-27 93.9 1.3 7.4e-27 93.6 1.3 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF440 SHIPPO-rpt PF07004.12 NODE_49076_length_382_cov_4.293948_g41191_i0reverse_frame_2 - 0.06 14.3 2.1 0.06 14.3 2.1 4.7 4 2 0 4 4 4 0 Sperm-tail PG-rich repeat Sec62 PF03839.16 NODE_49076_length_382_cov_4.293948_g41191_i0forward_frame_3 - 0.12 11.8 1.9 0.15 11.5 1.9 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Vps23_core PF09454.10 NODE_49075_length_382_cov_4.645533_g41190_i0forward_frame_3 - 0.067 13.2 0.3 0.14 12.2 0.3 1.5 1 0 0 1 1 1 0 Vps23 core domain VWC PF00093.18 NODE_49074_length_382_cov_18.536023_g41189_i0forward_frame_3 - 0.32 11.3 9.4 0.73 10.2 9.4 1.6 1 1 0 1 1 1 0 von Willebrand factor type C domain DUF3974 PF13120.6 NODE_49068_length_382_cov_45.054755_g41183_i0forward_frame_3 - 0.0087 16.2 0.4 0.012 15.7 0.3 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF3974) WBP-1 PF11669.8 NODE_49065_length_382_cov_51.351585_g41180_i0reverse_frame_2 - 0.041 14.5 0.5 0.58 10.8 0.0 2.1 2 0 0 2 2 2 0 WW domain-binding protein 1 YusW PF14039.6 NODE_49062_length_382_cov_61.559078_g41177_i0forward_frame_2 - 0.0056 17.2 0.8 0.01 16.3 0.8 1.4 1 0 0 1 1 1 1 YusW-like protein Asparaginase_2 PF01112.18 NODE_49062_length_382_cov_61.559078_g41177_i0forward_frame_2 - 0.057 12.4 0.2 0.11 11.5 0.2 1.4 1 0 0 1 1 1 0 Asparaginase RSS_P20 PF11757.8 NODE_49062_length_382_cov_61.559078_g41177_i0forward_frame_2 - 7.4 7.1 10.7 0.21 12.1 0.4 2.5 2 1 0 2 2 2 0 Suppressor of RNA silencing P21-like N-terminal domain DUF1298 PF06974.13 NODE_49060_length_382_cov_62.959654_g41175_i0reverse_frame_3 - 0.0036 17.3 0.0 0.0048 16.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Mpv17_PMP22 PF04117.12 NODE_49058_length_382_cov_66.417867_g41173_i0forward_frame_2 - 0.0061 16.8 1.3 0.012 15.8 1.3 1.4 1 0 0 1 1 1 1 Mpv17 / PMP22 family zf-RING_10 PF16685.5 NODE_49055_length_382_cov_67.383285_g41170_i0reverse_frame_3 - 0.0023 18.0 7.5 0.0037 17.4 7.5 1.3 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-C3HC4_3 PF13920.6 NODE_49055_length_382_cov_67.383285_g41170_i0reverse_frame_3 - 0.023 14.5 7.7 0.037 13.9 7.7 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) KH_1 PF00013.29 NODE_49054_length_382_cov_70.446686_g41169_i0forward_frame_3 - 3.6e-11 42.7 0.0 7.6e-11 41.7 0.0 1.5 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 NODE_49054_length_382_cov_70.446686_g41169_i0forward_frame_3 - 0.0023 17.7 0.3 0.0044 16.8 0.0 1.6 2 0 0 2 2 2 1 KH domain KH_5 PF13184.6 NODE_49054_length_382_cov_70.446686_g41169_i0forward_frame_3 - 0.0039 17.2 0.2 0.012 15.7 0.3 1.7 2 0 0 2 2 2 1 NusA-like KH domain RPA_interact_M PF14767.6 NODE_49051_length_382_cov_75.870317_g41167_i0reverse_frame_2 - 0.051 14.1 0.0 0.09 13.4 0.0 1.5 1 0 0 1 1 1 0 Replication protein A interacting middle TMCO5 PF14992.6 NODE_49050_length_382_cov_77.867435_g41166_i0forward_frame_2 - 1.4 8.4 4.9 1.7 8.2 4.9 1.1 1 0 0 1 1 1 0 TMCO5 family DUF4010 PF13194.6 NODE_49045_length_382_cov_113.841499_g41161_i0reverse_frame_3 - 5.9 6.5 9.9 4.2 7.0 8.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4010) RCC1_2 PF13540.6 NODE_49045_length_382_cov_113.841499_g41161_i0reverse_frame_2 - 1.5e-05 24.7 2.7 0.56 10.1 0.2 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RRF_GI PF12614.8 NODE_49040_length_382_cov_130.902017_g41156_i0forward_frame_3 - 0.0081 16.3 1.0 0.011 15.9 1.0 1.2 1 0 0 1 1 1 1 Ribosome recycling factor ACBP PF00887.19 NODE_49040_length_382_cov_130.902017_g41156_i0forward_frame_3 - 0.031 14.5 0.5 0.052 13.8 0.0 1.6 2 0 0 2 2 2 0 Acyl CoA binding protein RCC1_2 PF13540.6 NODE_49038_length_382_cov_141.158501_g41154_i0reverse_frame_2 - 0.042 13.7 3.2 3.3 7.6 1.1 2.4 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Dickkopf_N PF04706.12 NODE_49038_length_382_cov_141.158501_g41154_i0forward_frame_3 - 0.17 12.4 4.8 5.5 7.6 0.2 2.2 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region DUF2079 PF09852.9 NODE_49030_length_382_cov_320.037464_g41146_i0forward_frame_2 - 0.13 11.1 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) DUF2202 PF09968.9 NODE_49027_length_382_cov_859.974063_g41143_i0reverse_frame_3 - 0.02 14.7 0.6 0.024 14.5 0.6 1.1 1 0 0 1 1 1 0 Uncharacterized protein domain (DUF2202) TIL PF01826.17 NODE_49027_length_382_cov_859.974063_g41143_i0reverse_frame_2 - 0.33 11.2 9.7 1.3 9.3 0.5 2.4 2 0 0 2 2 2 0 Trypsin Inhibitor like cysteine rich domain TMEM208_SND2 PF05620.11 NODE_49026_length_382_cov_1335.195965_g41142_i0forward_frame_2 - 5.3 6.8 13.3 0.21 11.3 2.8 2.2 1 1 1 2 2 2 0 SRP-independent targeting protein 2/TMEM208 EcKinase PF02958.20 NODE_49024_length_382_cov_4750.270893_g41140_i0reverse_frame_2 - 0.071 12.4 0.1 0.078 12.3 0.1 1.2 1 0 0 1 1 1 0 Ecdysteroid kinase KAR9 PF08580.10 NODE_49024_length_382_cov_4750.270893_g41140_i0forward_frame_3 - 3.9 5.9 11.0 4.6 5.6 11.0 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 Bundlin PF05307.11 NODE_49018_length_383_cov_1.500000_g41134_i0forward_frame_2 - 0.031 14.1 5.0 0.031 14.1 5.0 2.0 2 1 0 2 2 2 0 Bundlin YcbB PF08664.10 NODE_49011_length_383_cov_1.974138_g41127_i0reverse_frame_3 - 0.11 12.6 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 YcbB domain Pkinase PF00069.25 NODE_49010_length_383_cov_2.020115_g41126_i0forward_frame_3 - 2.1e-25 89.6 3.5 2.4e-25 89.4 3.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49010_length_383_cov_2.020115_g41126_i0forward_frame_3 - 1.8e-16 60.2 1.2 2e-16 60.1 1.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_49010_length_383_cov_2.020115_g41126_i0forward_frame_3 - 4.4e-06 26.2 0.6 5.3e-06 26.0 0.6 1.0 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 NODE_49010_length_383_cov_2.020115_g41126_i0forward_frame_3 - 0.0019 17.6 0.0 0.0027 17.1 0.0 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family ProRS-C_2 PF09181.10 NODE_49008_length_383_cov_2.123563_g41124_i0forward_frame_2 - 0.1 12.8 0.2 0.16 12.1 0.2 1.4 1 0 0 1 1 1 0 Prolyl-tRNA synthetase, C-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks181.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks181.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks181.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks181.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RVT_2 PF07727.14 NODE_49007_length_383_cov_2.143678_g41123_i0reverse_frame_2 - 3.6e-12 46.4 0.0 4.4e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) LRR_8 PF13855.6 NODE_49001_length_383_cov_2.485632_g41117_i0reverse_frame_3 - 0.0066 16.2 0.1 0.021 14.6 0.0 1.8 1 1 0 1 1 1 1 Leucine rich repeat TMEM219 PF14940.6 NODE_48998_length_383_cov_2.669540_g41114_i0reverse_frame_2 - 0.17 11.4 3.5 0.21 11.1 3.5 1.1 1 0 0 1 1 1 0 Transmembrane 219 Pentapeptide PF00805.22 NODE_48997_length_383_cov_2.692529_g41113_i0reverse_frame_3 - 0.009 15.6 0.1 0.02 14.5 0.1 1.6 1 0 0 1 1 1 1 Pentapeptide repeats (8 copies) DUF5313 PF17240.2 NODE_48994_length_383_cov_2.859195_g41110_i0reverse_frame_2 - 5.8 7.4 5.6 5.4 7.5 4.5 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5313) Nucleoporin_FG PF13634.6 NODE_48993_length_383_cov_2.956897_g41109_i0forward_frame_3 - 0.011 16.5 7.2 0.66 10.9 0.7 2.2 1 1 1 2 2 2 0 Nucleoporin FG repeat region DUF5441 PF17513.2 NODE_48992_length_383_cov_3.270115_g41108_i0forward_frame_2 - 0.026 14.3 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5441) DUF1405 PF07187.11 NODE_48987_length_383_cov_3.511494_g41103_i0forward_frame_3 - 0.025 14.6 0.1 0.031 14.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1405) Peptidase_M15_2 PF05951.13 NODE_48977_length_383_cov_46.827586_g41093_i0forward_frame_2 - 0.019 14.6 0.7 0.039 13.6 0.5 1.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF882) RE_HaeIII PF09556.10 NODE_48977_length_383_cov_46.827586_g41093_i0forward_frame_2 - 0.023 13.8 4.3 0.028 13.5 4.3 1.2 1 0 0 1 1 1 0 HaeIII restriction endonuclease PELOTA_1 PF15608.6 NODE_48973_length_383_cov_63.839080_g41089_i0reverse_frame_2 - 0.025 14.4 0.0 0.051 13.5 0.0 1.5 1 0 0 1 1 1 0 PELOTA RNA binding domain DUF4844 PF16133.5 NODE_48973_length_383_cov_63.839080_g41089_i0forward_frame_2 - 0.049 14.2 0.2 0.099 13.2 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4844) Shisa PF13908.6 NODE_48969_length_383_cov_69.813218_g41085_i0reverse_frame_3 - 0.14 12.4 0.5 0.14 12.4 0.5 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator NSP2-B_epitope PF14757.6 NODE_48968_length_383_cov_71.827586_g41084_i0reverse_frame_3 - 0.11 12.2 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Immunogenic region of nsp2 protein of arterivirus polyprotein DUF1945 PF09178.10 NODE_48967_length_383_cov_75.109195_g41083_i0forward_frame_3 - 0.056 13.6 0.4 0.11 12.7 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1945) FlhE PF06366.13 NODE_48960_length_383_cov_87.307471_g41076_i0reverse_frame_2 - 0.14 12.1 0.0 0.26 11.3 0.0 1.4 1 0 0 1 1 1 0 Flagellar protein FlhE ig PF00047.25 NODE_48949_length_383_cov_111.284483_g41065_i0forward_frame_3 - 0.12 12.5 0.0 0.36 11.0 0.0 1.7 1 1 1 2 2 2 0 Immunoglobulin domain MORN PF02493.20 NODE_48945_length_383_cov_142.051724_g41061_i0reverse_frame_3 - 8.2e-06 25.4 22.5 2.5e-05 23.9 0.9 5.3 5 1 0 5 5 5 4 MORN repeat Rtt106_N PF18215.1 NODE_48945_length_383_cov_142.051724_g41061_i0forward_frame_3 - 0.099 12.4 0.3 0.43 10.4 0.1 1.9 2 0 0 2 2 2 0 Histone chaperone Rtt106 N-terminal domain SCF PF02404.15 NODE_48945_length_383_cov_142.051724_g41061_i0forward_frame_3 - 1 8.7 6.4 1.4 8.2 6.4 1.1 1 0 0 1 1 1 0 Stem cell factor X PF00739.19 NODE_48942_length_383_cov_207.382184_g41058_i0forward_frame_2 - 0.067 13.3 1.4 0.086 13.0 1.4 1.3 1 0 0 1 1 1 0 Trans-activation protein X zf-CCHC_5 PF14787.6 NODE_48942_length_383_cov_207.382184_g41058_i0forward_frame_2 - 0.49 10.1 5.8 0.14 11.9 1.6 2.0 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger DUF5068 PF16781.5 NODE_48941_length_383_cov_218.715517_g41057_i0reverse_frame_3 - 0.0029 17.4 0.1 0.0032 17.3 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5068) RepA_N PF06970.11 NODE_48941_length_383_cov_218.715517_g41057_i0reverse_frame_3 - 0.023 14.6 0.3 0.075 13.0 0.2 1.8 2 0 0 2 2 2 0 Replication initiator protein A (RepA) N-terminus Lamprin PF06403.11 NODE_48939_length_383_cov_230.660920_g41055_i0forward_frame_2 - 2.7 7.9 29.9 1.8 8.5 5.1 3.1 1 1 2 3 3 3 0 Lamprin Proteasome_A_N PF10584.9 NODE_48937_length_383_cov_254.790230_g41053_i0forward_frame_2 - 0.69 9.7 2.3 32 4.3 0.2 2.7 2 0 0 2 2 2 0 Proteasome subunit A N-terminal signature PPI_Ypi1 PF07491.11 NODE_48933_length_383_cov_1535.537356_g41050_i0reverse_frame_2 - 1.2e-12 47.5 6.6 1.2e-12 47.5 6.6 2.2 2 2 0 2 2 2 1 Protein phosphatase inhibitor FANCI_S2 PF14676.6 NODE_48933_length_383_cov_1535.537356_g41050_i0forward_frame_3 - 0.057 13.7 0.2 0.068 13.5 0.2 1.2 1 0 0 1 1 1 0 FANCI solenoid 2 DUF3742 PF12553.8 NODE_48933_length_383_cov_1535.537356_g41050_i0forward_frame_2 - 0.92 9.6 3.9 1.3 9.1 3.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) DUF5540 PF17694.1 NODE_48931_length_383_cov_10146.103448_g41048_i0forward_frame_2 - 0.57 10.7 5.0 6.3 7.4 0.4 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5540) NOGCT PF08155.11 NODE_48930_length_383_cov_44425.514368_g41047_i0reverse_frame_2 - 0.085 12.8 2.3 0.14 12.2 0.1 2.2 2 0 0 2 2 2 0 NOGCT (NUC087) domain cNMP_binding PF00027.29 NODE_48928_length_384_cov_1.512894_g41045_i0reverse_frame_3 - 0.069 13.2 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Leader_Trp PF08255.11 NODE_48927_length_384_cov_1.661891_g41044_i0reverse_frame_2 - 2.7e-07 29.9 1.3 4.9e-07 29.1 1.3 1.5 1 0 0 1 1 1 1 Trp-operon Leader Peptide YccJ PF13993.6 NODE_48922_length_384_cov_2.510029_g41039_i0reverse_frame_2 - 1.1e-07 32.1 0.2 1.4e-07 31.7 0.2 1.2 1 0 0 1 1 1 1 YccJ-like protein RVT_2 PF07727.14 NODE_48921_length_384_cov_2.527221_g41038_i0reverse_frame_3 - 0.013 15.2 0.0 0.014 15.0 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) UL45 PF05473.12 NODE_48921_length_384_cov_2.527221_g41038_i0forward_frame_3 - 0.011 15.4 1.8 0.012 15.3 1.8 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like CBS PF00571.28 NODE_48918_length_384_cov_3.103152_g41035_i0reverse_frame_3 - 7.3e-07 29.5 0.2 1.4e-05 25.4 0.1 2.6 1 1 2 3 3 3 1 CBS domain 4PPT_N PF17837.1 NODE_48918_length_384_cov_3.103152_g41035_i0reverse_frame_2 - 0.039 14.1 2.1 0.039 14.1 2.1 1.7 2 0 0 2 2 2 0 4'-phosphopantetheinyl transferase N-terminal domain N_formyltrans_C PF18216.1 NODE_48918_length_384_cov_3.103152_g41035_i0forward_frame_2 - 0.09 12.5 0.2 7.2 6.4 0.0 2.2 2 0 0 2 2 2 0 N-formyltransferase dimerization C-terminal domain PI_PP_I PF18363.1 NODE_48914_length_384_cov_3.372493_g41031_i0forward_frame_2 - 0.044 14.0 0.5 0.071 13.3 0.5 1.3 1 0 0 1 1 1 0 Phosphoinositide phosphatase insertion domain Peroxin-22 PF12827.7 NODE_48906_length_384_cov_4.873926_g41023_i0reverse_frame_2 - 0.038 13.9 0.0 0.051 13.5 0.0 1.1 1 0 0 1 1 1 0 Peroxisomal biogenesis protein family Med9 PF07544.13 NODE_48902_length_384_cov_15.747851_g41019_i0reverse_frame_3 - 0.032 14.3 0.2 0.051 13.7 0.2 1.2 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 ABC_tran PF00005.27 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 5.2e-20 72.4 0.0 5.9e-20 72.2 0.0 1.0 1 0 0 1 1 1 1 ABC transporter SRP54 PF00448.22 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.00011 21.9 0.1 0.00016 21.4 0.1 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_21 PF13304.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.0091 15.8 0.0 0.0091 15.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.015 15.8 4.3 0.031 14.8 4.3 1.7 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.04 13.6 1.5 0.12 12.0 1.5 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.043 13.5 0.0 0.061 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.05 13.3 0.5 0.095 12.5 0.5 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SANTA PF09133.10 NODE_48897_length_384_cov_49.681948_g41015_i0forward_frame_3 - 0.047 14.2 0.2 0.11 13.0 0.1 1.6 1 1 0 2 2 2 0 SANTA (SANT Associated) DUF5345 PF17280.2 NODE_48895_length_384_cov_55.782235_g41013_i0reverse_frame_3 - 0.017 15.0 0.1 0.026 14.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5345) CDC50 PF03381.15 NODE_48895_length_384_cov_55.782235_g41013_i0reverse_frame_3 - 0.13 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF5435 PF17503.2 NODE_48890_length_384_cov_70.902579_g41008_i0reverse_frame_2 - 0.12 12.1 0.7 0.17 11.6 0.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5435) NIF PF03031.18 NODE_48888_length_384_cov_72.991404_g41006_i0reverse_frame_2 - 3.9e-29 101.5 0.6 5.9e-29 100.8 0.3 1.4 1 1 1 2 2 2 1 NLI interacting factor-like phosphatase Tax PF02959.16 NODE_48885_length_384_cov_75.593123_g41003_i0forward_frame_3 - 0.16 11.4 0.4 0.31 10.4 0.3 1.5 1 1 1 2 2 2 0 HTLV Tax GCM PF03615.15 NODE_48882_length_384_cov_97.687679_g41000_i0reverse_frame_3 - 0.054 13.4 4.3 0.07 13.0 4.3 1.2 1 0 0 1 1 1 0 GCM motif protein DUF3987 PF13148.6 NODE_48880_length_384_cov_99.647564_g40998_i0reverse_frame_2 - 0.23 10.4 4.3 0.33 9.9 4.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3987) HCMV_UL139 PF12507.8 NODE_48879_length_384_cov_104.263610_g40997_i0forward_frame_3 - 3.9 7.9 7.4 7.2 7.0 7.4 1.5 1 1 0 1 1 1 0 Human Cytomegalovirus UL139 protein NARG2_C PF10505.9 NODE_48878_length_384_cov_105.146132_g40996_i0reverse_frame_3 - 0.0067 16.0 2.7 0.0078 15.7 2.7 1.0 1 0 0 1 1 1 1 NMDA receptor-regulated gene protein 2 C-terminus Rieske PF00355.26 NODE_48869_length_384_cov_190.618911_g40987_i0reverse_frame_2 - 0.021 14.7 0.4 0.093 12.7 0.0 1.9 1 1 1 2 2 2 0 Rieske [2Fe-2S] domain PPDFL PF15060.6 NODE_48869_length_384_cov_190.618911_g40987_i0forward_frame_3 - 0.023 15.2 0.0 0.039 14.5 0.0 1.4 1 0 0 1 1 1 0 Differentiation and proliferation regulator AAA_8 PF12780.7 NODE_48868_length_384_cov_195.426934_g40986_i0forward_frame_2 - 1.6e-08 34.2 0.2 2.8e-08 33.4 0.0 1.4 2 0 0 2 2 2 1 P-loop containing dynein motor region D4 YscO-like PF16789.5 NODE_48868_length_384_cov_195.426934_g40986_i0forward_frame_2 - 0.0027 17.8 1.7 0.0032 17.5 1.7 1.1 1 0 0 1 1 1 1 YscO-like protein TSNAXIP1_N PF15739.5 NODE_48868_length_384_cov_195.426934_g40986_i0forward_frame_2 - 0.073 13.5 2.1 0.15 12.4 1.5 1.6 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus Mobilization_B PF17511.2 NODE_48868_length_384_cov_195.426934_g40986_i0forward_frame_2 - 0.15 12.4 0.2 0.23 11.8 0.2 1.3 1 0 0 1 1 1 0 Mobilization protein B DUF5556 PF17711.1 NODE_48867_length_384_cov_236.481375_g40985_i0reverse_frame_2 - 0.035 14.0 0.9 0.045 13.7 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5556) PHD PF00628.29 NODE_48858_length_384_cov_1201.077364_g40976_i0reverse_frame_2 - 0.049 13.5 4.0 0.17 11.8 4.0 1.9 1 1 0 1 1 1 0 PHD-finger She9_MDM33 PF05546.11 NODE_48858_length_384_cov_1201.077364_g40976_i0reverse_frame_2 - 0.084 12.7 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 She9 / Mdm33 family zf-B_box PF00643.24 NODE_48858_length_384_cov_1201.077364_g40976_i0reverse_frame_2 - 0.22 11.7 6.0 0.4 10.9 6.0 1.4 1 0 0 1 1 1 0 B-box zinc finger zf-RING-like PF08746.11 NODE_48858_length_384_cov_1201.077364_g40976_i0reverse_frame_2 - 0.63 10.4 6.4 1.6 9.1 0.6 2.2 1 1 1 2 2 2 0 RING-like domain Sec23_BS PF08033.12 NODE_48858_length_384_cov_1201.077364_g40976_i0forward_frame_3 - 0.054 14.2 0.1 0.091 13.5 0.1 1.4 1 0 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain Chloroa_b-bind PF00504.21 NODE_48857_length_384_cov_1261.091691_g40975_i0reverse_frame_3 - 0.00018 22.1 0.1 0.00024 21.7 0.1 1.5 1 1 0 1 1 1 1 Chlorophyll A-B binding protein COMPASS-Shg1 PF05205.12 NODE_48855_length_384_cov_3447.323782_g40974_i0reverse_frame_2 - 0.0041 17.8 0.1 0.005 17.5 0.1 1.1 1 0 0 1 1 1 1 COMPASS (Complex proteins associated with Set1p) component shg1 Ureide_permease PF07168.11 NODE_48855_length_384_cov_3447.323782_g40974_i0forward_frame_2 - 8.7 5.0 8.7 1.5 7.5 0.6 2.1 2 0 0 2 2 2 0 Ureide permease Glycolytic PF00274.19 NODE_48854_length_384_cov_4733.120344_g40973_i0reverse_frame_2 - 4e-05 22.5 0.2 4.8e-05 22.2 0.2 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Chloroa_b-bind PF00504.21 NODE_48853_length_384_cov_13002.750716_g40972_i0reverse_frame_3 - 0.00048 20.7 0.2 0.00053 20.5 0.2 1.3 1 1 0 1 1 1 1 Chlorophyll A-B binding protein bZIP_1 PF00170.21 ORF98444 - 9.1e-09 35.3 9.5 1.8e-08 34.3 9.5 1.5 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF98444 - 6.6e-07 29.3 11.1 6.6e-07 29.3 11.1 1.6 2 0 0 2 2 2 1 Basic region leucine zipper bZIP_Maf PF03131.17 ORF98444 - 0.001 19.5 8.9 0.0016 18.9 8.9 1.3 1 0 0 1 1 1 1 bZIP Maf transcription factor DUF4618 PF15397.6 ORF98444 - 0.0037 16.7 4.1 0.0048 16.4 4.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) FlaC_arch PF05377.11 ORF98444 - 0.0054 17.1 0.5 0.013 15.9 0.5 1.6 1 0 0 1 1 1 1 Flagella accessory protein C (FlaC) TMF_TATA_bd PF12325.8 ORF98444 - 0.0064 16.7 1.7 0.0064 16.7 1.7 1.6 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding DivIC PF04977.15 ORF98444 - 0.0083 15.9 4.7 0.016 14.9 4.6 1.6 1 1 0 1 1 1 1 Septum formation initiator IFT20 PF14931.6 ORF98444 - 0.021 15.0 4.9 0.03 14.5 4.9 1.4 1 0 0 1 1 1 0 Intraflagellar transport complex B, subunit 20 GIT_CC PF16559.5 ORF98444 - 0.025 14.4 2.4 0.047 13.6 2.4 1.4 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor TSC22 PF01166.18 ORF98444 - 0.027 14.8 1.0 0.062 13.6 1.0 1.6 1 0 0 1 1 1 0 TSC-22/dip/bun family Prominin PF05478.11 ORF98444 - 0.039 11.9 2.7 0.044 11.7 2.7 1.0 1 0 0 1 1 1 0 Prominin NRBF2 PF08961.10 ORF98444 - 0.041 13.5 1.9 0.053 13.1 1.9 1.2 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator Spc24 PF08286.11 ORF98444 - 0.13 12.5 3.8 0.12 12.6 2.7 1.6 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 Imm7 PF15585.6 ORF98444 - 0.18 12.1 0.8 0.28 11.5 0.2 1.6 1 1 0 1 1 1 0 Immunity protein 7 CCDC-167 PF15188.6 ORF98444 - 0.24 11.8 4.8 0.34 11.3 4.8 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 ZapB PF06005.12 ORF98444 - 0.25 11.8 6.9 0.51 10.8 6.9 1.8 1 1 0 1 1 1 0 Cell division protein ZapB FlxA PF14282.6 ORF98444 - 0.59 10.1 8.6 0.37 10.8 6.9 1.6 1 1 0 1 1 1 0 FlxA-like protein CASP_C PF08172.12 ORF98444 - 0.67 9.2 8.0 7.2 5.9 6.6 2.3 1 1 1 2 2 2 0 CASP C terminal Neugrin PF06413.11 ORF98343 - 1.3 9.0 11.0 1.5 8.8 11.0 1.0 1 0 0 1 1 1 0 Neugrin Striatin PF08232.12 ORF98343 - 5 7.7 13.7 6.8 7.3 13.7 1.3 1 0 0 1 1 1 0 Striatin family Pro_isomerase PF00160.21 ORF97500 - 5.5e-36 124.2 0.3 5.9e-36 124.1 0.3 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HNH PF01844.23 ORF96901 - 0.048 13.8 0.0 0.46 10.7 0.0 2.1 2 0 0 2 2 2 0 HNH endonuclease PDZ_1 PF12812.7 ORF96772 - 0.01 15.9 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 0 PDZ-like domain Thioredoxin PF00085.20 ORF96123 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF96123 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF96123 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF96123 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF96123 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF96123 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF96123 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF96123 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF96123 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF96123 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF96123 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF96123 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein K_channel_TID PF07941.11 ORF96003 - 0.2 12.1 3.5 0.31 11.5 3.5 1.3 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain ECH_1 PF00378.20 ORF95504 - 2.5e-11 43.4 0.0 8.1e-11 41.7 0.0 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF95504 - 6.4e-08 32.5 0.0 7e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase MFS_1 PF07690.16 ORF94722 - 5.3e-05 22.3 0.1 6.5e-05 22.0 0.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF94722 - 0.00022 20.2 0.2 0.00024 20.1 0.2 1.1 1 0 0 1 1 1 1 MFS_1 like family MFS_2 PF13347.6 ORF94722 - 0.00086 18.0 0.1 0.00091 17.9 0.1 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein EF-hand_1 PF00036.32 ORF94337 - 0.00012 21.4 0.1 0.00035 19.9 0.1 1.9 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF94337 - 0.00035 20.3 0.1 0.0013 18.5 0.0 1.9 2 0 0 2 2 2 1 EF-hand domain Gly_radical PF01228.21 ORF9404 - 4.8e-22 78.5 0.1 8.5e-22 77.7 0.0 1.5 2 0 0 2 2 2 1 Glycine radical Asp PF00026.23 ORF93963 - 8.7e-05 22.1 0.0 0.00012 21.6 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Lipoprotein_18 PF06804.11 ORF93861 - 0.04 13.0 0.9 0.043 12.9 0.9 1.1 1 0 0 1 1 1 0 NlpB/DapX lipoprotein DUF2294 PF10057.9 ORF92728 - 0.01 15.9 0.3 0.015 15.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2294) Pro_sub2 PF18513.1 ORF92728 - 0.033 14.3 0.9 0.048 13.8 0.2 1.6 2 0 0 2 2 2 0 Prodomain subtilisin 2 DUF613 PF04764.12 ORF92728 - 0.49 10.5 6.2 0.12 12.5 2.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF613) RE_ScaI PF09569.10 ORF92132 - 0.12 12.1 6.3 0.13 12.0 6.3 1.1 1 0 0 1 1 1 0 ScaI restriction endonuclease EF-hand_1 PF00036.32 ORF89879 - 0.0018 17.7 0.4 0.0048 16.4 0.4 1.8 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF89879 - 0.054 13.5 0.7 0.23 11.5 0.1 2.2 2 0 0 2 2 2 0 EF-hand domain MatE PF01554.18 ORF87627 - 7.8e-05 22.4 1.3 7.8e-05 22.4 1.3 1.3 2 0 0 2 2 2 1 MatE TP2 PF01254.18 ORF87002 - 5.4 7.6 8.2 35 5.0 8.2 2.0 1 1 0 1 1 1 0 Nuclear transition protein 2 DUF5313 PF17240.2 ORF86783 - 0.21 12.0 0.1 0.47 10.9 0.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Phage_antitermQ PF06530.12 ORF86622 - 5.9e-53 177.8 0.3 6.6e-53 177.6 0.3 1.0 1 0 0 1 1 1 1 Phage antitermination protein Q DUF1133 PF06576.11 ORF86622 - 0.025 14.0 0.1 0.041 13.3 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1133) Rad10 PF03834.14 ORF86622 - 0.15 12.1 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) Fimbrial PF00419.20 ORF86409 - 7.9e-21 74.9 0.1 8.6e-21 74.8 0.1 1.0 1 0 0 1 1 1 1 Fimbrial protein ESM4 PF15952.5 ORF86014 - 3.9 7.9 10.9 4.9 7.5 10.9 1.1 1 0 0 1 1 1 0 Enhancer of split M4 family ABC_tran PF00005.27 ORF8578 - 1.5e-09 38.5 0.0 2.7e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF8578 - 1.3e-07 31.3 0.4 1.7e-07 30.9 0.4 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF2087 PF09860.9 ORF8578 - 0.0027 17.8 0.1 0.011 15.9 0.0 1.9 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2087) DUF505 PF04458.12 ORF8578 - 0.013 14.0 0.1 0.019 13.4 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF505) CRF-BP PF05428.11 ORF8578 - 0.07 11.9 0.1 0.081 11.7 0.1 1.1 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) DMP12 PF16779.5 ORF8578 - 0.091 12.7 0.8 0.23 11.5 0.8 1.7 1 1 0 1 1 1 0 DNA-mimic protein Ndc80_HEC PF03801.13 ORF85609 - 0.094 12.3 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 HEC/Ndc80p family DUF2304 PF10066.9 ORF84982 - 0.0027 17.9 4.5 0.0039 17.4 4.5 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) DUF5373 PF17343.2 ORF84982 - 0.017 15.0 6.5 0.019 14.8 6.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5373) DUF2070 PF09843.9 ORF84982 - 0.87 7.8 8.0 0.88 7.8 8.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) CTP_transf_like PF01467.26 ORF84420 - 4.6e-16 59.3 0.0 7.2e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like EF-hand_1 PF00036.32 ORF8439 - 0.0018 17.7 0.4 0.0048 16.4 0.4 1.8 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF8439 - 0.054 13.5 0.7 0.23 11.5 0.1 2.2 2 0 0 2 2 2 0 EF-hand domain PDEase_I PF00233.19 ORF83357 - 0.0006 19.6 0.3 0.0011 18.8 0.0 1.6 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase EBP50_C PF09007.11 ORF83357 - 0.0061 17.5 2.6 0.0092 17.0 2.6 1.3 1 0 0 1 1 1 1 EBP50, C-terminal YjbH PF06082.11 ORF83357 - 0.065 12.0 1.5 0.064 12.1 1.5 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH Connexin PF00029.19 ORF83357 - 0.38 10.5 1.6 0.47 10.2 1.6 1.2 1 0 0 1 1 1 0 Connexin FAM176 PF14851.6 ORF83357 - 2.6 7.7 11.2 3.2 7.4 11.2 1.2 1 0 0 1 1 1 0 FAM176 family CDC45 PF02724.14 ORF83357 - 3.4 5.9 17.9 4.2 5.5 17.9 1.0 1 0 0 1 1 1 0 CDC45-like protein Sporozoite_P67 PF05642.11 ORF83357 - 5.9 4.9 7.9 6.2 4.8 7.9 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen MFS_1 PF07690.16 ORF82922 - 7.8e-06 25.0 0.1 8.5e-06 24.9 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1 PF07690.16 ORF81744 - 9e-11 41.3 1.8 9.8e-11 41.2 1.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily APC_r PF05923.12 ORF81417 - 0.056 13.2 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 APC repeat Vps54 PF07928.12 ORF81165 - 0.12 12.8 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 Vps54-like protein cwf18 PF08315.12 ORF8071 - 2.8e-24 86.3 6.7 3.1e-24 86.2 6.7 1.1 1 0 0 1 1 1 1 cwf18 pre-mRNA splicing factor Nif11 PF07862.11 ORF8071 - 0.0062 16.8 2.5 0.065 13.6 0.3 2.4 2 0 0 2 2 2 1 Nif11 domain RTX_C PF08339.10 ORF80559 - 0.0034 17.5 0.4 0.0044 17.1 0.4 1.2 1 0 0 1 1 1 1 RTX C-terminal domain Peptidase_C101 PF16218.5 ORF80559 - 0.007 15.7 1.0 0.0082 15.4 1.0 1.1 1 0 0 1 1 1 1 Peptidase family C101 DUF4028 PF13220.6 ORF79656 - 0.014 15.2 0.4 0.024 14.4 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4028) DUF1945 PF09178.10 ORF79656 - 0.086 13.0 0.2 0.16 12.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1945) Glyco_hydro38C2 PF17677.1 ORF79593 - 1.5e-09 37.8 0.0 2.2e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain TMEM144 PF07857.12 ORF78657 - 6e-15 55.0 2.7 6.8e-15 54.9 2.7 1.0 1 0 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Sugar_transport PF06800.12 ORF78657 - 7.8e-08 32.0 3.4 9.8e-08 31.7 3.4 1.2 1 0 0 1 1 1 1 Sugar transport protein Multi_Drug_Res PF00893.19 ORF78657 - 0.011 16.3 4.2 0.012 16.2 2.9 1.8 1 1 0 1 1 1 0 Small Multidrug Resistance protein Abhydrolase_6 PF12697.7 ORF78164 - 0.08 13.5 0.3 0.087 13.4 0.3 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family SID-1_RNA_chan PF13965.6 ORF78065 - 4.9e-11 41.8 2.0 5.4e-11 41.6 2.0 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 Lipocalin_7 PF14651.6 ORF7747 - 0.007 16.3 0.7 0.007 16.3 0.7 1.6 2 0 0 2 2 2 1 Lipocalin / cytosolic fatty-acid binding protein family NOA36 PF06524.12 ORF7747 - 1.2 8.3 13.7 1.3 8.3 13.7 1.1 1 0 0 1 1 1 0 NOA36 protein Filo_VP24 PF06389.11 ORF77098 - 0.082 12.4 0.2 0.1 12.1 0.2 1.1 1 0 0 1 1 1 0 Filovirus membrane-associated protein VP24 TetR_C_6 PF13977.6 ORF75661 - 0.15 12.2 1.0 0.49 10.6 0.2 1.9 1 1 1 2 2 2 0 BetI-type transcriptional repressor, C-terminal ApoLp-III PF07464.11 ORF75139 - 0.017 15.2 1.9 0.02 15.0 1.9 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DUF885 PF05960.11 ORF75139 - 0.023 14.4 3.7 0.027 14.2 3.7 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) Toxin_28 PF08115.11 ORF73076 - 0.11 12.4 4.7 0.2 11.5 4.7 1.4 1 0 0 1 1 1 0 SFI toxin family HemY_N PF07219.13 ORF73076 - 4 7.7 5.9 6.8 6.9 5.9 1.4 1 1 0 1 1 1 0 HemY protein N-terminus DUF983 PF06170.12 ORF73044 - 0.39 11.1 5.4 0.11 12.9 1.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF983) GDA1_CD39 PF01150.17 ORF72923 - 0.035 12.8 0.1 0.037 12.7 0.1 1.1 1 0 0 1 1 1 0 GDA1/CD39 (nucleoside phosphatase) family DUF1005 PF06219.12 ORF72363 - 0.0014 17.8 0.2 0.0018 17.4 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1005) TMEM71 PF15121.6 ORF72363 - 0.058 13.1 1.3 0.075 12.7 1.3 1.2 1 0 0 1 1 1 0 TMEM71 protein family PanZ PF12568.8 ORF7153 - 1.3e-50 170.4 0.0 1.5e-50 170.2 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_1 PF00583.25 ORF7153 - 2.5e-05 24.5 0.0 2.9e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF7153 - 0.025 14.5 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF7153 - 0.027 14.9 0.0 0.037 14.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF7153 - 0.073 13.0 0.1 0.16 12.0 0.1 1.5 1 0 0 1 1 1 0 FR47-like protein Copine PF07002.16 ORF70858 - 1.1e-08 34.8 0.2 1.4e-08 34.5 0.2 1.2 1 0 0 1 1 1 1 Copine CompInhib_SCIN PF11546.8 ORF70858 - 0.028 14.4 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 Staphylococcal complement inhibitor SCIN Ribosomal_L2 PF00181.23 ORF70579 - 8.3e-16 57.7 0.3 1.2e-15 57.2 0.3 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L2_C PF03947.18 ORF70579 - 6.6e-06 26.3 0.1 1.1e-05 25.6 0.1 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain RNaseH_C PF09293.10 ORF6914 - 0.023 15.1 2.0 0.023 15.1 2.0 2.0 1 1 1 2 2 2 0 T4 RNase H, C terminal DUF4375 PF14300.6 ORF6914 - 0.077 13.3 6.5 0.1 12.8 6.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4375) Peptidase_M73 PF12389.8 ORF6914 - 0.45 10.3 6.0 0.61 9.9 6.0 1.3 1 1 0 1 1 1 0 Camelysin metallo-endopeptidase MDM10 PF12519.8 ORF6914 - 1.7 7.4 6.8 1.9 7.2 6.8 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 DNA_pol3_a_NII PF11490.8 ORF6914 - 1.9 8.4 24.9 0.16 11.9 10.5 2.3 1 1 1 2 2 2 0 DNA polymerase III polC-type N-terminus II Salt_tol_Pase PF09506.10 ORF69094 - 0.032 13.0 0.1 0.034 12.9 0.1 1.1 1 0 0 1 1 1 0 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) Arc PF03869.14 ORF69094 - 0.098 12.5 1.5 0.11 12.4 0.1 1.8 2 1 0 2 2 2 0 Arc-like DNA binding domain KASH PF10541.9 ORF6902 - 0.044 14.0 0.4 0.1 12.9 0.4 1.6 1 0 0 1 1 1 0 Nuclear envelope localisation domain SHIPPO-rpt PF07004.12 ORF6898 - 0.0078 17.1 0.6 0.024 15.5 0.0 2.1 2 0 0 2 2 2 1 Sperm-tail PG-rich repeat STG PF15809.5 ORF68532 - 0.24 11.4 0.0 6.8 6.7 0.0 2.0 2 0 0 2 2 2 0 Simian taste bud-specific gene product family DUF4842 PF16130.5 ORF67805 - 0.23 11.6 8.2 0.28 11.4 8.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4842) ABC_tran PF00005.27 ORF67562 - 1.3e-09 38.7 0.1 2.4e-09 37.8 0.0 1.4 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF67562 - 4.4e-06 26.3 0.2 4.7e-06 26.2 0.2 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF505 PF04458.12 ORF67562 - 0.028 12.8 0.0 0.05 12.0 0.0 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF505) Lycopene_cycl PF05834.12 ORF66095 - 0.037 13.1 0.0 0.044 12.8 0.0 1.1 1 0 0 1 1 1 0 Lycopene cyclase protein DUF809 PF05663.11 ORF66095 - 0.68 10.1 3.5 1.1 9.4 0.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF809) Thioredoxin PF00085.20 ORF66001 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF66001 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF66001 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF66001 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF66001 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF66001 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF66001 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF66001 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF66001 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF66001 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF66001 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF66001 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein TIR PF01582.20 ORF65649 - 0.045 13.6 0.0 0.068 13.0 0.0 1.3 1 0 0 1 1 1 0 TIR domain D123 PF07065.14 ORF65585 - 1.1e-22 80.6 0.0 1.2e-22 80.5 0.0 1.0 1 0 0 1 1 1 1 D123 YliH PF10799.8 ORF65352 - 1e-75 251.6 4.4 1.2e-75 251.5 4.4 1.0 1 0 0 1 1 1 1 Biofilm formation protein (YliH/bssR) AbfS_sensor PF18225.1 ORF64741 - 0.066 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain HisKA_3 PF07730.13 ORF62935 - 0.1 13.1 0.4 0.24 11.9 0.4 1.5 1 0 0 1 1 1 0 Histidine kinase DHHC PF01529.20 ORF62786 - 0.0001 22.4 1.7 0.00016 21.8 1.7 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase DUF35_N PF12172.8 ORF62786 - 0.0012 18.7 1.1 0.0016 18.2 1.1 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_15 PF17032.5 ORF62786 - 0.13 13.0 3.4 0.18 12.6 3.4 1.4 1 1 0 1 1 1 0 zinc-ribbon family CAF1A PF12253.8 ORF62786 - 0.18 12.0 9.1 0.11 12.6 7.3 1.6 1 1 0 1 1 1 0 Chromatin assembly factor 1 subunit A MFS_1 PF07690.16 ORF62509 - 5.3e-05 22.3 0.1 6.5e-05 22.0 0.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF62509 - 0.00022 20.2 0.2 0.00024 20.1 0.2 1.1 1 0 0 1 1 1 1 MFS_1 like family MFS_2 PF13347.6 ORF62509 - 0.00086 18.0 0.1 0.00091 17.9 0.1 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein Methyltransf_24 PF13578.6 ORF62115 - 2.2e-11 44.7 0.0 3e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TylF PF05711.11 ORF62115 - 0.016 14.5 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) PARP PF00644.20 ORF6138 - 9e-19 67.8 0.0 9.5e-19 67.8 0.0 1.1 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Imm35 PF15567.6 ORF60744 - 0.066 13.4 0.2 0.35 11.1 0.1 2.0 1 1 1 2 2 2 0 Immunity protein 35 KSHV_K1 PF11049.8 ORF60284 - 0.0039 17.1 0.1 0.01 15.8 0.0 1.7 2 0 0 2 2 2 1 Glycoprotein K1 of Kaposi's sarcoma-associated herpes virus Pkinase PF00069.25 ORF60239 - 4.7e-25 88.4 0.1 5.3e-25 88.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60239 - 4.7e-13 49.0 0.0 5.5e-13 48.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF60239 - 0.013 14.8 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Thioredoxin PF00085.20 ORF59944 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF59944 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF59944 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF59944 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF59944 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF59944 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF59944 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF59944 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF59944 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF59944 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF59944 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF59944 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein SecE PF00584.20 ORF58828 - 6.4e-20 70.8 1.2 6.4e-20 70.8 1.2 2.7 3 0 0 3 3 3 1 SecE/Sec61-gamma subunits of protein translocation complex S1FA PF04689.13 ORF58828 - 5.3 7.3 5.7 0.8 9.9 1.9 1.8 2 1 0 2 2 2 0 DNA binding protein S1FA Thioredoxin PF00085.20 ORF57966 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF57966 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF57966 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF57966 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF57966 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF57966 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF57966 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF57966 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF57966 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF57966 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF57966 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF57966 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein AAA_11 PF13086.6 ORF57861 - 4.9 6.9 10.3 5.6 6.7 10.3 1.0 1 0 0 1 1 1 0 AAA domain FAM184 PF15665.5 ORF55128 - 0.1 12.4 9.9 0.13 12.0 9.9 1.1 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B TSKS PF15358.6 ORF55128 - 4.9 5.4 8.5 34 2.6 8.5 1.9 1 1 0 1 1 1 0 Testis-specific serine kinase substrate SDH_alpha PF03313.15 ORF54921 - 7e-57 193.1 8.6 7.7e-57 192.9 8.6 1.0 1 0 0 1 1 1 1 Serine dehydratase alpha chain MmgE_PrpD PF03972.14 ORF54921 - 0.037 12.6 0.6 0.039 12.5 0.6 1.1 1 0 0 1 1 1 0 MmgE/PrpD family MFS_2 PF13347.6 ORF54 - 0.014 14.0 7.5 0.015 13.9 7.5 1.0 1 0 0 1 1 1 0 MFS/sugar transport protein MFS_1 PF07690.16 ORF54 - 0.09 11.7 14.7 0.096 11.6 14.0 1.4 1 1 0 1 1 1 0 Major Facilitator Superfamily OATP PF03137.20 ORF54 - 0.73 8.0 7.6 0.09 11.0 0.9 1.9 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family GST_C_2 PF13410.6 ORF50513 - 5.8e-10 39.0 0.1 1.1e-09 38.2 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF50513 - 0.0007 19.8 0.0 0.0013 18.9 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain MRP-S27 PF10037.9 ORF49862 - 0.019 13.8 0.0 0.021 13.7 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 APC_r PF05923.12 ORF49247 - 0.056 13.2 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 APC repeat MORN PF02493.20 ORF48130 - 1.1e-17 62.8 7.2 1.7e-08 33.9 0.9 3.5 3 0 0 3 3 3 3 MORN repeat RE_AlwI PF09491.10 ORF48022 - 0.044 12.6 2.9 0.053 12.3 2.9 1.0 1 0 0 1 1 1 0 AlwI restriction endonuclease UPF0147 PF03685.13 ORF47710 - 0.012 15.7 2.6 0.013 15.5 0.9 1.8 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0147) DUF3584 PF12128.8 ORF46787 - 0.0012 16.5 7.6 0.0014 16.2 7.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) FAM76 PF16046.5 ORF46787 - 0.036 13.4 6.7 0.042 13.2 6.7 1.1 1 0 0 1 1 1 0 FAM76 protein DUF4407 PF14362.6 ORF46787 - 0.053 12.9 3.4 0.083 12.2 3.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Syntaxin-6_N PF09177.11 ORF46787 - 0.061 13.9 6.1 0.51 10.9 6.0 2.3 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF745 PF05335.13 ORF46787 - 0.12 12.1 5.3 0.023 14.4 2.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 ORF46787 - 0.13 12.3 6.7 2.3 8.3 1.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.12 ORF46787 - 0.18 11.8 12.5 1.6 8.8 12.5 2.1 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Tropomyosin_1 PF12718.7 ORF46787 - 0.31 11.2 14.1 1.1 9.4 4.1 2.1 1 1 1 2 2 2 0 Tropomyosin like PLC-beta_C PF08703.10 ORF46787 - 0.33 10.9 12.1 0.52 10.3 5.5 2.3 1 1 1 2 2 2 0 PLC-beta C terminal Exonuc_VII_L PF02601.15 ORF46787 - 0.45 10.0 5.4 0.5 9.9 5.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit OmpH PF03938.14 ORF46787 - 0.59 10.5 12.5 0.063 13.6 5.0 2.1 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) DUF5082 PF16888.5 ORF46787 - 0.7 10.2 10.5 2.2 8.6 10.4 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Prefoldin_2 PF01920.20 ORF46787 - 0.81 9.7 16.3 2.6 8.1 4.9 3.0 1 1 1 3 3 3 0 Prefoldin subunit YlqD PF11068.8 ORF46787 - 1.5 9.2 9.8 1.6 9.1 4.8 2.1 1 1 1 2 2 2 0 YlqD protein CENP-F_leu_zip PF10473.9 ORF46787 - 1.6 8.7 14.3 1.9 8.5 8.1 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fib_alpha PF08702.10 ORF46787 - 1.8 8.7 11.7 9.3 6.4 11.7 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family zf-C4H2 PF10146.9 ORF46787 - 5.8 7.2 8.1 7.5 6.8 8.1 1.2 1 0 0 1 1 1 0 Zinc finger-containing protein SlyX PF04102.12 ORF46787 - 7 7.3 9.7 37 5.0 2.4 3.3 1 1 1 2 2 2 0 SlyX Ferlin_C PF16165.5 ORF46608 - 0.0017 18.3 0.0 0.0019 18.1 0.0 1.1 1 0 0 1 1 1 1 Ferlin C-terminus PDZ_6 PF17820.1 ORF46335 - 5.4e-05 22.9 0.5 0.092 12.6 0.2 2.4 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF46335 - 0.00015 22.1 0.0 0.019 15.3 0.0 2.3 2 0 0 2 2 2 2 PDZ domain DUF1902 PF08972.11 ORF46335 - 0.12 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1902) p450 PF00067.22 ORF46098 - 3.1e-24 85.6 0.1 3.4e-24 85.4 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 CcmH PF03918.14 ORF45416 - 6.2e-43 145.5 0.6 7.1e-43 145.3 0.6 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein DUF3797 PF12677.7 ORF45416 - 0.084 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) Phage_base_V PF04717.12 ORF45416 - 0.087 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector Ank_2 PF12796.7 ORF43707 - 6.4e-18 65.1 0.1 7.9e-15 55.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF43707 - 3.3e-13 49.6 0.4 7.1e-07 29.4 0.3 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF43707 - 8.2e-12 45.0 0.6 0.00038 20.8 0.0 3.5 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF43707 - 1.3e-11 44.7 0.1 1.5e-05 25.5 0.0 2.3 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF43707 - 5.1e-10 38.7 0.0 0.00043 20.5 0.0 3.3 4 0 0 4 4 4 2 Ankyrin repeat RVP PF00077.20 ORF43707 - 0.0027 18.0 0.9 0.65 10.3 0.0 3.0 1 1 1 3 3 3 1 Retroviral aspartyl protease Asp_protease_2 PF13650.6 ORF43707 - 0.011 16.3 0.2 0.03 14.9 0.0 1.8 3 0 0 3 3 3 0 Aspartyl protease DUF334 PF03904.13 ORF4242 - 0.2 11.2 4.2 0.4 10.2 4.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF334) Phage_Nu1 PF07471.12 ORF42328 - 0.0036 17.1 0.2 0.005 16.6 0.2 1.1 1 0 0 1 1 1 1 Phage DNA packaging protein Nu1 Actin PF00022.19 ORF42225 - 2.3e-40 138.5 0.0 2.6e-40 138.3 0.0 1.0 1 0 0 1 1 1 1 Actin DJ-1_PfpI PF01965.24 ORF42225 - 0.11 12.4 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 DJ-1/PfpI family Kinesin PF00225.23 ORF41933 - 1.4e-26 93.3 1.4 1.5e-26 93.1 1.4 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF41933 - 2.8e-11 43.6 0.3 3.8e-11 43.1 0.3 1.2 1 0 0 1 1 1 1 Microtubule binding MRP-S27 PF10037.9 ORF41814 - 0.019 13.8 0.0 0.021 13.7 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 Terminase_5 PF06056.12 ORF41273 - 0.11 12.4 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) Thioredoxin PF00085.20 ORF40028 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF40028 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF40028 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF40028 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF40028 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF40028 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF40028 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF40028 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF40028 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF40028 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF40028 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF40028 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein EF-hand_1 PF00036.32 ORF39434 - 0.00012 21.4 0.1 0.00035 19.9 0.1 1.9 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF39434 - 0.00035 20.3 0.1 0.0013 18.5 0.0 1.9 2 0 0 2 2 2 1 EF-hand domain Thymidylat_synt PF00303.19 ORF39037 - 0.027 13.6 0.0 0.037 13.2 0.0 1.1 1 0 0 1 1 1 0 Thymidylate synthase VP7 PF00434.18 ORF39037 - 0.093 11.8 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycoprotein VP7 EF-hand_1 PF00036.32 ORF38915 - 0.00012 21.4 0.1 0.00035 19.9 0.1 1.9 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF38915 - 0.00035 20.3 0.1 0.0013 18.5 0.0 1.9 2 0 0 2 2 2 1 EF-hand domain Rnk_N PF14760.6 ORF37024 - 0.22 12.0 0.0 0.41 11.2 0.0 1.4 1 0 0 1 1 1 0 Rnk N-terminus LRR_4 PF12799.7 ORF37024 - 7.8 7.1 12.6 1.8 9.1 4.7 3.1 2 2 0 2 2 2 0 Leucine Rich repeats (2 copies) Tctex-1 PF03645.13 ORF36659 - 8e-26 90.3 0.6 9.3e-26 90.1 0.6 1.1 1 0 0 1 1 1 1 Tctex-1 family Ribosomal_S20p PF01649.18 ORF36659 - 0.041 14.5 0.7 0.058 14.0 0.7 1.2 1 0 0 1 1 1 0 Ribosomal protein S20 DUF4350 PF14258.6 ORF36351 - 0.13 12.7 0.0 0.18 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) PhaG_MnhG_YufB PF03334.14 ORF35775 - 0.016 15.4 0.0 0.025 14.8 0.0 1.3 1 0 0 1 1 1 0 Na+/H+ antiporter subunit Toxin_28 PF08115.11 ORF35569 - 0.11 12.4 4.7 0.2 11.5 4.7 1.4 1 0 0 1 1 1 0 SFI toxin family HemY_N PF07219.13 ORF35569 - 4 7.7 5.9 6.8 6.9 5.9 1.4 1 1 0 1 1 1 0 HemY protein N-terminus APC_r PF05923.12 ORF3552 - 0.056 13.2 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 APC repeat DUF1570 PF07607.11 ORF3435 - 0.083 13.2 0.0 0.11 12.8 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1570) DUF599 PF04654.12 ORF3435 - 0.18 11.2 2.4 0.92 8.9 2.4 1.9 1 1 0 1 1 1 0 Protein of unknown function, DUF599 DUF2457 PF10446.9 ORF34225 - 0.11 11.7 15.1 0.1 11.7 15.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF4820 PF16091.5 ORF34225 - 0.56 9.5 6.3 0.71 9.2 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) SURF2 PF05477.11 ORF34225 - 0.68 9.6 9.4 0.77 9.4 9.4 1.1 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) DNA_pol_phi PF04931.13 ORF34225 - 7 4.6 18.6 7.3 4.6 18.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi B3_4 PF03483.17 ORF34093 - 0.16 11.6 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 B3/4 domain Abhydrolase_1 PF00561.20 ORF33955 - 1.5e-06 28.1 0.0 2.1e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF33955 - 0.00014 22.5 0.0 0.00019 22.1 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF33955 - 0.0038 16.5 0.1 0.0049 16.2 0.1 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Antimicrobial23 PF16048.5 ORF33234 - 0.55 10.0 4.2 1 9.1 4.2 1.4 1 0 0 1 1 1 0 Frog antimicrobial peptide DUF3439 PF11921.8 ORF32862 - 0.053 13.5 0.6 0.085 12.8 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Syntaxin-18_N PF10496.9 ORF32331 - 0.1 12.9 4.1 0.25 11.6 4.1 1.8 1 1 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus HEPN_LA2681 PF18733.1 ORF31663 - 0.0081 15.5 0.0 0.009 15.3 0.0 1.2 1 0 0 1 1 1 1 LA2681-like HEPN TCR_zetazeta PF11628.8 ORF31663 - 0.014 15.1 0.1 0.029 14.0 0.1 1.5 1 0 0 1 1 1 0 T-cell surface glycoprotein CD3 zeta chain TPR_1 PF00515.28 ORF31663 - 0.062 13.1 0.4 0.14 12.0 0.4 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat Bac_DNA_binding PF00216.21 ORF31528 - 0.053 13.7 0.1 0.099 12.9 0.1 1.4 1 0 0 1 1 1 0 Bacterial DNA-binding protein Thioredoxin PF00085.20 ORF31507 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF31507 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF31507 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF31507 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF31507 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF31507 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF31507 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF31507 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF31507 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF31507 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF31507 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF31507 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein CFAP91 PF14738.6 ORF30876 - 0.17 11.9 5.3 1.1 9.3 0.8 2.0 1 1 1 2 2 2 0 Cilia- and flagella-associated protein 91 Bax1-I PF01027.20 ORF29145 - 0.033 14.0 7.7 0.05 13.4 7.7 1.3 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 OAD_gamma PF04277.13 ORF29145 - 0.059 14.0 0.0 0.14 12.7 0.0 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain ABC_membrane PF00664.23 ORF29145 - 0.088 12.4 3.8 0.063 12.9 2.8 1.3 1 1 0 1 1 1 0 ABC transporter transmembrane region DUF2721 PF11026.8 ORF29145 - 0.83 9.5 5.5 0.63 9.9 3.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) TssN PF17555.2 ORF29145 - 1.4 8.3 4.6 1.6 8.0 4.6 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssN ABC_tran PF00005.27 ORF28595 - 1.6e-09 38.4 0.0 2.7e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF28595 - 2.5e-07 30.4 0.2 3.1e-07 30.1 0.2 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain CRF-BP PF05428.11 ORF28595 - 0.013 14.3 0.0 0.014 14.2 0.0 1.1 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) DUF2087 PF09860.9 ORF28595 - 0.04 14.1 0.1 0.24 11.6 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2087) DUF348 PF03990.14 ORF2797 - 0.07 12.9 0.0 5.1 6.9 0.0 2.3 2 0 0 2 2 2 0 G5-linked-Ubiquitin-like domain NOG1 PF06858.14 ORF25003 - 0.02 14.7 0.3 0.087 12.6 0.1 2.0 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) CcdA PF07362.12 ORF25003 - 0.11 13.0 3.1 7.2 7.1 0.4 2.4 1 1 1 2 2 2 0 Post-segregation antitoxin CcdA DUF3876 PF12992.7 ORF24617 - 0.17 12.0 1.4 11 6.2 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3876) CF222 PF15661.5 ORF24403 - 0.021 13.7 9.9 0.032 13.1 9.7 1.4 1 1 0 1 1 1 0 C6orf222, uncharacterised family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks182.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks182.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks182.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks182.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5313 PF17240.2 ORF23347 - 0.21 12.0 0.1 0.47 10.9 0.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Thioredoxin PF00085.20 ORF22627 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF22627 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF22627 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF22627 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF22627 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF22627 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF22627 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF22627 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF22627 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF22627 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF22627 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF22627 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein GP40 PF11025.8 ORF22480 - 2.5 7.8 13.3 4 7.2 2.8 2.1 1 1 1 2 2 2 0 Glycoprotein GP40 of Cryptosporidium FGFR3_TM PF18123.1 ORF22298 - 7.2 6.2 8.9 10 5.7 0.1 2.9 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain SBP_bac_5 PF00496.22 ORF21804 - 0.017 14.1 1.2 0.023 13.7 1.2 1.3 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle Caleosin PF05042.13 ORF21804 - 0.024 14.6 0.6 0.028 14.4 0.6 1.4 1 1 0 1 1 1 0 Caleosin related protein HTH_19 PF12844.7 ORF21010 - 0.00083 19.3 0.0 0.0016 18.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 ORF21010 - 0.0017 18.7 0.0 0.0025 18.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 ORF21010 - 0.019 14.8 0.0 0.035 14.0 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_3 PF01381.22 ORF21010 - 0.027 14.6 0.0 0.061 13.4 0.0 1.7 1 1 0 1 1 1 0 Helix-turn-helix HTH_37 PF13744.6 ORF21010 - 0.058 13.3 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain CTP_transf_like PF01467.26 ORF19304 - 4.6e-16 59.3 0.0 7.2e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like RBP_receptor PF14752.6 ORF19173 - 0.0058 15.3 0.5 0.0071 15.0 0.5 1.1 1 0 0 1 1 1 1 Retinol binding protein receptor CENP-F_leu_zip PF10473.9 ORF17387 - 0.00077 19.5 19.6 0.00088 19.3 19.6 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ATG16 PF08614.11 ORF17387 - 0.0018 18.5 10.8 0.0025 18.1 10.8 1.3 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) HAP1_N PF04849.13 ORF17387 - 0.0018 17.5 17.2 0.0021 17.3 17.2 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region TPR_MLP1_2 PF07926.12 ORF17387 - 0.0027 17.7 21.3 0.0062 16.6 21.3 1.6 1 1 0 1 1 1 1 TPR/MLP1/MLP2-like protein Seryl_tRNA_N PF02403.22 ORF17387 - 0.0042 17.3 16.4 0.0042 17.3 16.4 1.7 1 1 1 2 2 2 1 Seryl-tRNA synthetase N-terminal domain Synaptobrevin PF00957.21 ORF17387 - 0.0047 16.7 3.1 0.0047 16.7 3.1 1.9 1 1 1 2 2 2 1 Synaptobrevin Golgin_A5 PF09787.9 ORF17387 - 0.0072 15.8 18.0 0.0082 15.6 18.0 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 Lipoprotein_6 PF01441.19 ORF17387 - 0.018 15.1 8.9 0.021 14.8 8.6 1.3 1 1 0 1 1 1 0 Lipoprotein Snapin_Pallidin PF14712.6 ORF17387 - 0.019 15.3 10.1 0.019 15.3 10.1 2.2 1 1 1 2 2 2 0 Snapin/Pallidin Sulfatase_C PF14707.6 ORF17387 - 0.029 15.1 7.5 0.13 13.0 2.8 2.4 1 1 1 2 2 2 0 C-terminal region of aryl-sulfatase Tropomyosin_1 PF12718.7 ORF17387 - 0.037 14.2 23.0 0.028 14.6 20.4 2.0 2 1 0 2 2 2 0 Tropomyosin like BicD PF09730.9 ORF17387 - 0.039 12.4 15.8 0.047 12.1 15.8 1.1 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D PilJ PF13675.6 ORF17387 - 0.048 13.7 3.7 0.12 12.4 2.6 1.8 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term TMCO5 PF14992.6 ORF17387 - 0.049 13.2 20.9 0.032 13.8 12.2 2.0 1 1 1 2 2 2 0 TMCO5 family Lectin_N PF03954.14 ORF17387 - 0.056 13.2 7.3 0.16 11.7 4.0 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain RPW8 PF05659.11 ORF17387 - 0.059 13.1 17.3 0.8 9.4 1.3 2.2 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Spc7 PF08317.11 ORF17387 - 0.077 11.9 18.4 0.09 11.6 18.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Rootletin PF15035.6 ORF17387 - 0.08 13.0 14.3 0.13 12.3 14.3 1.4 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion DUF4407 PF14362.6 ORF17387 - 0.1 11.9 9.8 0.32 10.3 9.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TolA_bind_tri PF16331.5 ORF17387 - 0.12 12.5 8.6 0.24 11.5 6.9 2.2 1 1 1 2 2 2 0 TolA binding protein trimerisation Atg14 PF10186.9 ORF17387 - 0.12 11.4 15.6 0.14 11.2 15.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Prominin PF05478.11 ORF17387 - 0.13 10.2 12.0 0.14 10.1 12.0 1.0 1 0 0 1 1 1 0 Prominin Exonuc_VII_L PF02601.15 ORF17387 - 0.19 11.3 9.3 0.22 11.1 9.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit HemX PF04375.14 ORF17387 - 0.2 10.9 9.7 0.24 10.7 9.7 1.2 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase CENP-H PF05837.12 ORF17387 - 0.22 11.9 15.9 0.089 13.2 12.4 1.8 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Mod_r PF07200.13 ORF17387 - 0.24 11.5 18.6 0.36 10.9 18.6 1.3 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Jnk-SapK_ap_N PF09744.9 ORF17387 - 0.24 11.6 20.0 0.47 10.7 19.9 1.6 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF724 PF05266.14 ORF17387 - 0.28 11.0 15.7 0.45 10.3 15.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF745 PF05335.13 ORF17387 - 0.3 10.8 9.5 0.36 10.5 9.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) Nup88 PF10168.9 ORF17387 - 0.32 8.8 13.8 0.38 8.5 13.8 1.0 1 0 0 1 1 1 0 Nuclear pore component Fzo_mitofusin PF04799.13 ORF17387 - 0.44 10.1 10.9 0.12 11.9 6.7 1.9 1 1 1 2 2 2 0 fzo-like conserved region COG2 PF06148.11 ORF17387 - 0.47 10.5 11.0 0.15 12.1 6.8 1.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 gpW PF02831.15 ORF17387 - 0.49 10.3 2.2 8.7 6.3 0.1 3.0 3 0 0 3 3 3 0 gpW Fib_alpha PF08702.10 ORF17387 - 0.52 10.5 16.7 3.8 7.7 7.6 2.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family UPF0242 PF06785.11 ORF17387 - 0.53 10.4 19.8 0.72 9.9 19.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2258 PF10015.9 ORF17387 - 0.66 10.2 4.3 0.32 11.1 1.3 2.0 2 1 0 2 2 1 0 Uncharacterized protein conserved in archaea (DUF2258) DUF812 PF05667.11 ORF17387 - 0.86 8.4 21.6 0.94 8.3 21.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) HIP1_clath_bdg PF16515.5 ORF17387 - 0.9 10.2 16.0 1.2 9.8 15.4 1.6 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DHR10 PF18595.1 ORF17387 - 0.95 9.5 18.4 4.5 7.4 18.3 1.8 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain TMPIT PF07851.13 ORF17387 - 1.1 8.5 17.1 0.81 8.9 15.3 1.6 1 1 1 2 2 2 0 TMPIT-like protein Tup_N PF08581.10 ORF17387 - 1.1 9.6 19.9 0.046 14.0 9.6 3.1 1 1 2 3 3 3 0 Tup N-terminal NPV_P10 PF05531.12 ORF17387 - 1.2 9.7 4.1 4.3 7.9 4.1 2.1 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF5082 PF16888.5 ORF17387 - 1.2 9.4 16.6 1 9.7 15.3 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) OmpH PF03938.14 ORF17387 - 1.2 9.4 25.8 0.68 10.3 17.7 2.2 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) GrpE PF01025.19 ORF17387 - 1.3 8.7 19.2 0.29 10.8 14.5 2.1 1 1 2 3 3 3 0 GrpE BRE1 PF08647.11 ORF17387 - 1.3 9.1 24.1 2.6 8.2 23.9 1.7 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase VIR_N PF15912.5 ORF17387 - 1.6 8.3 7.2 1.9 8.0 7.2 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal Tho2 PF11262.8 ORF17387 - 1.8 7.7 17.0 4.7 6.3 17.0 1.6 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 AAA_11 PF13086.6 ORF17387 - 1.8 8.3 11.4 2.2 8.0 11.4 1.1 1 0 0 1 1 1 0 AAA domain ADIP PF11559.8 ORF17387 - 1.9 8.6 17.1 3 7.9 17.0 1.5 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF2203 PF09969.9 ORF17387 - 1.9 9.2 13.1 1.3 9.8 5.2 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) V_ATPase_I PF01496.19 ORF17387 - 2.1 6.2 14.2 2.5 5.9 14.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2207 PF09972.9 ORF17387 - 2.3 6.9 11.5 2.6 6.7 11.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) APG6_N PF17675.1 ORF17387 - 2.7 8.5 24.9 9.1 6.8 24.9 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region Uso1_p115_C PF04871.13 ORF17387 - 2.7 8.4 22.0 12 6.3 21.9 2.0 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DMPK_coil PF08826.10 ORF17387 - 3 8.0 16.4 1 9.5 7.6 2.9 1 1 2 3 3 3 0 DMPK coiled coil domain like DUF4337 PF14235.6 ORF17387 - 3.1 7.9 17.9 3.7 7.7 17.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) TMF_DNA_bd PF12329.8 ORF17387 - 3.2 7.8 26.0 2.9 7.9 1.2 3.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF3450 PF11932.8 ORF17387 - 3.3 6.9 15.9 5.5 6.2 12.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF4446 PF14584.6 ORF17387 - 4.5 7.2 11.9 3 7.8 9.0 2.1 1 1 2 3 3 3 0 Protein of unknown function (DUF4446) CortBP2 PF09727.9 ORF17387 - 5 7.0 20.6 7.4 6.4 0.1 2.0 1 1 1 2 2 2 0 Cortactin-binding protein-2 DUF4140 PF13600.6 ORF17387 - 5.4 7.5 8.1 27 5.3 8.1 2.2 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) FlaC_arch PF05377.11 ORF17387 - 5.5 7.5 12.9 0.54 10.7 4.7 2.9 1 1 1 3 3 2 0 Flagella accessory protein C (FlaC) MRPL52 PF18699.1 ORF17387 - 5.6 7.2 19.1 3.3 7.9 2.2 2.3 1 1 1 2 2 2 0 Mitoribosomal protein mL52 YabA PF06156.13 ORF17387 - 6.1 7.5 14.6 21 5.8 14.6 2.0 1 1 0 1 1 1 0 Initiation control protein YabA EMP24_GP25L PF01105.24 ORF17387 - 6.8 6.6 11.7 0.91 9.4 5.8 1.9 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD Ax_dynein_light PF10211.9 ORF17387 - 7.5 6.5 22.6 15 5.5 21.3 1.8 1 1 1 2 2 2 0 Axonemal dynein light chain BST2 PF16716.5 ORF17387 - 8.3 7.1 19.1 1.6 9.4 6.6 2.9 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 DUF4404 PF14357.6 ORF17387 - 8.8 7.1 11.5 3.1 8.5 2.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) FapA PF03961.13 ORF17387 - 8.9 4.8 19.0 15 4.1 18.5 1.5 1 1 0 1 1 1 0 Flagellar Assembly Protein A bZIP_1 PF00170.21 ORF17387 - 9.9 6.4 20.4 0.29 11.3 8.3 3.0 2 1 1 3 3 3 0 bZIP transcription factor EF-hand_1 PF00036.32 ORF15158 - 0.00012 21.4 0.1 0.00035 19.9 0.1 1.9 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF15158 - 0.00035 20.3 0.1 0.0013 18.5 0.0 1.9 2 0 0 2 2 2 1 EF-hand domain SMC_N PF02463.19 ORF1512 - 0.00075 19.0 0.2 0.00075 19.0 0.2 1.9 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain CDC45 PF02724.14 ORF1512 - 0.034 12.5 8.2 0.032 12.5 8.2 1.1 1 0 0 1 1 1 0 CDC45-like protein EMC3_TMCO1 PF01956.16 ORF1512 - 1.2 8.8 7.6 1.6 8.4 7.6 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Presenilin PF01080.17 ORF1512 - 3.6 6.3 6.3 3.2 6.4 6.3 1.1 1 0 0 1 1 1 0 Presenilin DUF4407 PF14362.6 ORF1512 - 9.6 5.4 11.5 11 5.3 11.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF5313 PF17240.2 ORF13923 - 0.21 12.0 0.1 0.47 10.9 0.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Synaptobrevin PF00957.21 ORF13353 - 2.4e-18 65.7 0.1 3.7e-18 65.1 0.1 1.3 1 0 0 1 1 1 1 Synaptobrevin DUF2721 PF11026.8 ORF13353 - 0.0033 17.3 0.3 0.0042 17.0 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2721) DUF4231 PF14015.6 ORF13353 - 0.0058 17.1 0.8 0.0083 16.6 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4231) DUF4131 PF13567.6 ORF13353 - 0.038 13.6 0.3 0.053 13.2 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) RskA PF10099.9 ORF13353 - 0.046 14.0 0.6 0.086 13.1 0.6 1.4 1 1 0 1 1 1 0 Anti-sigma-K factor rskA DUF2207 PF09972.9 ORF13353 - 0.078 11.7 0.0 0.085 11.6 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Trp_oprn_chp PF09534.10 ORF13353 - 0.19 11.5 2.5 8.2 6.2 0.7 2.0 1 1 1 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Wzy_C PF04932.15 ORF13353 - 1.3 8.6 4.3 0.68 9.6 1.8 1.6 1 1 1 2 2 2 0 O-Antigen ligase OapA_N PF08525.11 ORF13353 - 9.2 6.3 8.8 8.5 6.5 5.1 2.1 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif SWIRM-assoc_2 PF16496.5 ORF12758 - 0.029 13.2 0.2 0.034 13.0 0.2 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal cwf18 PF08315.12 ORF11604 - 2.8e-24 86.3 6.7 3.1e-24 86.2 6.7 1.1 1 0 0 1 1 1 1 cwf18 pre-mRNA splicing factor Nif11 PF07862.11 ORF11604 - 0.0062 16.8 2.5 0.065 13.6 0.3 2.4 2 0 0 2 2 2 1 Nif11 domain Ank_4 PF13637.6 ORF112441 - 7.4e-15 55.1 0.1 1.9e-09 37.9 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF112441 - 1.7e-10 41.4 0.1 2.4e-05 24.8 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF112441 - 1.1e-09 38.3 0.1 0.00037 20.7 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF112441 - 7.8e-08 32.0 0.0 0.032 14.8 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF112441 - 2.5e-06 27.7 0.2 0.058 13.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat DUF5313 PF17240.2 ORF112110 - 0.21 12.0 0.1 0.47 10.9 0.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5313) DUF2457 PF10446.9 ORF111031 - 0.11 11.7 15.1 0.1 11.7 15.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF4820 PF16091.5 ORF111031 - 0.56 9.5 6.3 0.71 9.2 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) SURF2 PF05477.11 ORF111031 - 0.68 9.6 9.4 0.77 9.4 9.4 1.1 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) DNA_pol_phi PF04931.13 ORF111031 - 7 4.6 18.6 7.3 4.6 18.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Synthase_beta PF11421.8 ORF110988 - 0.0086 16.8 3.0 0.017 15.8 3.0 1.5 1 0 0 1 1 1 1 ATP synthase F1 beta subunit zf-RING_2 PF13639.6 ORF110292 - 2.7e-11 43.6 5.6 3.8e-11 43.1 5.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF110292 - 8.7e-11 41.4 3.7 1.6e-10 40.5 3.7 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF110292 - 1.1e-07 31.5 4.9 1.7e-07 31.0 4.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF110292 - 1.6e-07 31.1 5.2 2.4e-07 30.5 5.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF110292 - 2.9e-07 30.4 4.0 4.9e-07 29.7 4.0 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF110292 - 3.9e-05 23.5 4.7 6.5e-05 22.8 4.7 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF110292 - 4.8e-05 22.9 2.8 7.8e-05 22.2 2.8 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF110292 - 6.1e-05 23.0 2.0 0.00011 22.2 2.0 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 ORF110292 - 0.0002 21.5 7.9 0.0011 19.2 7.9 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_6 PF14835.6 ORF110292 - 0.00098 19.0 0.8 0.0015 18.3 0.8 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein Prok-RING_4 PF14447.6 ORF110292 - 0.0029 17.4 6.3 0.007 16.2 6.2 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF110292 - 0.003 17.4 3.5 0.0049 16.7 3.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF110292 - 0.0045 17.1 3.8 0.011 15.9 3.8 1.6 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_1 PF14446.6 ORF110292 - 0.0059 16.5 1.8 0.069 13.1 0.3 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-HC5HC2H_2 PF13832.6 ORF110292 - 0.012 15.8 0.6 0.012 15.8 0.6 1.8 1 1 0 2 2 2 0 PHD-zinc-finger like domain zf-Nse PF11789.8 ORF110292 - 0.028 14.2 3.5 0.044 13.6 3.5 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-UDP PF14569.6 ORF110292 - 0.035 14.2 1.2 0.056 13.6 1.2 1.3 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-RING-like PF08746.11 ORF110292 - 0.18 12.2 5.4 0.36 11.2 5.4 1.6 1 1 0 1 1 1 0 RING-like domain FANCL_C PF11793.8 ORF110292 - 0.34 11.1 4.6 3.4 7.9 4.6 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3H2C3 PF17122.5 ORF110292 - 3.8 7.6 7.8 32 4.7 7.8 2.2 1 1 0 1 1 1 0 Zinc-finger Thioredoxin PF00085.20 ORF110154 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF110154 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF110154 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF110154 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF110154 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF110154 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF110154 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF110154 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF110154 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF110154 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF110154 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF110154 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein DUF5313 PF17240.2 ORF108433 - 0.21 12.0 0.1 0.47 10.9 0.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5313) FCD PF07729.12 ORF108326 - 4.5e-22 78.8 0.7 5.1e-22 78.6 0.7 1.0 1 0 0 1 1 1 1 FCD domain PSII_Pbs31 PF18240.1 ORF108326 - 0.022 15.2 0.0 2.7 8.5 0.0 2.1 2 0 0 2 2 2 0 Photosystem II Psb31 protein RNA_pol_Rpb4 PF03874.16 ORF108326 - 0.18 12.2 2.0 0.46 10.8 0.3 2.0 2 0 0 2 2 2 0 RNA polymerase Rpb4 Reo_P9 PF06043.11 ORF108057 - 0.16 11.3 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 Reovirus P9-like family Fmp27_SW PF10305.9 ORF106441 - 0.039 14.6 0.3 0.063 14.0 0.3 1.4 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Rrp44_CSD1 PF17216.3 ORF106441 - 0.1 12.3 0.5 0.13 12.0 0.5 1.2 1 0 0 1 1 1 0 Rrp44-like cold shock domain Cwf_Cwc_15 PF04889.12 ORF106441 - 0.12 12.1 6.0 0.14 11.8 6.0 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DUF962 PF06127.11 ORF106218 - 0.61 10.2 2.9 7.1 6.8 2.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF962) DUF4028 PF13220.6 ORF10572 - 0.014 15.2 0.4 0.024 14.4 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4028) DUF1945 PF09178.10 ORF10572 - 0.086 13.0 0.2 0.16 12.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1945) MR_MLE_N PF02746.16 ORF105302 - 0.069 13.4 0.3 0.12 12.6 0.3 1.4 1 1 0 1 1 1 0 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Porin_8 PF16966.5 ORF105287 - 0.045 12.7 0.1 0.048 12.6 0.1 1.1 1 0 0 1 1 1 0 Porin-like glycoporin RafY KN_motif PF12075.8 ORF105287 - 0.31 10.9 2.5 0.62 9.9 0.4 2.1 1 1 1 2 2 2 0 KN motif MFS_1 PF07690.16 ORF104805 - 5.3e-05 22.3 0.1 6.5e-05 22.0 0.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF104805 - 0.00022 20.2 0.2 0.00024 20.1 0.2 1.1 1 0 0 1 1 1 1 MFS_1 like family MFS_2 PF13347.6 ORF104805 - 0.00086 18.0 0.1 0.00091 17.9 0.1 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein EF-hand_1 PF00036.32 ORF104602 - 7.1e-06 25.2 0.0 0.14 11.8 0.1 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF104602 - 1.1e-05 25.8 0.0 0.065 13.7 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF104602 - 1.8e-05 24.3 0.1 0.15 12.1 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF104602 - 0.0024 17.7 0.3 0.26 11.2 0.0 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF104602 - 0.037 14.3 0.0 2.6 8.4 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 ORF104602 - 0.15 11.6 0.6 9.4 5.9 0.0 2.6 2 1 0 2 2 2 0 EF hand EamA PF00892.20 ORF103518 - 2.3e-06 27.8 10.4 2.6e-06 27.7 10.4 1.1 1 0 0 1 1 1 1 EamA-like transporter family VIT PF08487.10 ORF103518 - 0.026 14.7 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Vault protein inter-alpha-trypsin domain DUF2371 PF10177.9 ORF103518 - 0.13 12.5 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) TAP42 PF04177.12 ORF102047 - 0.093 11.8 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 TAP42-like family Ras PF00071.22 ORF101806 - 2.2e-06 27.3 0.0 3.3e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Ras family GTP_EFTU PF00009.27 ORF101806 - 0.00037 20.1 0.2 0.00069 19.2 0.1 1.4 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain SLT_beta PF02258.16 ORF101806 - 0.027 14.5 0.1 0.053 13.6 0.1 1.6 1 0 0 1 1 1 0 Shiga-like toxin beta subunit ADH_zinc_N_2 PF13602.6 ORF101593 - 3.9e-09 37.7 0.0 4.8e-09 37.4 0.0 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase SAM_Exu PF18609.1 ORF101593 - 0.11 12.6 0.1 0.19 11.9 0.1 1.3 1 0 0 1 1 1 0 Exuperantia SAM-like domain Phe_hydrox_dim PF07976.12 ORF101372 - 0.037 14.1 0.1 0.042 13.9 0.1 1.1 1 0 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain KIAA1430 PF13879.6 ORF101033 - 4.6e-20 72.3 14.5 5.8e-20 72.0 14.5 1.1 1 0 0 1 1 1 1 KIAA1430 homologue DUF4065 PF13274.6 ORF101033 - 0.32 11.9 2.8 0.5 11.3 2.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) Ribosomal_L17 PF01196.19 ORF100868 - 1.1e-34 119.1 0.0 1.4e-34 118.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L17 Glyco_transf_15 PF01793.16 ORF100784 - 1e-12 48.0 0.1 1.1e-12 47.8 0.1 1.0 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase Edc3_linker PF16598.5 ORF100556 - 0.044 14.5 3.4 0.057 14.1 3.4 1.1 1 0 0 1 1 1 0 Linker region of enhancer of mRNA-decapping protein 3 Methuselah_N PF06652.12 NODE_49552_length_376_cov_1.850440_g41661_i0forward_frame_1 - 0.05 13.5 1.5 0.058 13.3 1.5 1.2 1 0 0 1 1 1 0 Methuselah N-terminus TrkH PF02386.16 NODE_49549_length_376_cov_1.991202_g41658_i0forward_frame_1 - 1.8e-27 96.0 7.1 2e-27 95.8 7.1 1.1 1 0 0 1 1 1 1 Cation transport protein BPD_transp_1 PF00528.22 NODE_49545_length_376_cov_2.249267_g41654_i0forward_frame_1 - 3e-16 59.7 8.0 3.6e-16 59.4 8.0 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CHU_C PF13585.6 NODE_49544_length_376_cov_2.258065_g41653_i0reverse_frame_1 - 0.025 14.6 0.1 0.05 13.7 0.0 1.5 1 1 1 2 2 2 0 C-terminal domain of CHU protein family CRAL_TRIO PF00650.20 NODE_49536_length_376_cov_3.243402_g41645_i0forward_frame_1 - 7.9e-18 64.7 0.1 9.8e-18 64.4 0.1 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 NODE_49536_length_376_cov_3.243402_g41645_i0forward_frame_1 - 0.061 13.5 0.1 0.077 13.2 0.1 1.2 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain ADH_N PF08240.12 NODE_49535_length_376_cov_3.434018_g41644_i0reverse_frame_1 - 2.6e-26 91.6 0.0 3.2e-26 91.3 0.0 1.1 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain HP0268 PF18618.1 NODE_49534_length_376_cov_3.489736_g41643_i0forward_frame_1 - 0.067 13.6 0.1 0.11 12.9 0.1 1.4 1 0 0 1 1 1 0 HP0268 Herpes_glycoH_C PF17488.2 NODE_49528_length_376_cov_10.982405_g41637_i0forward_frame_1 - 0.085 12.7 0.8 0.13 12.0 0.8 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein H C-terminal domain Tim54 PF11711.8 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 0.026 13.3 5.3 0.023 13.5 5.3 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Connexin PF00029.19 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 0.098 12.4 4.6 0.12 12.1 4.6 1.2 1 0 0 1 1 1 0 Connexin RNA_pol_Rpc4 PF05132.14 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 0.73 10.2 9.2 0.79 10.1 9.2 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 CobT PF06213.12 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 0.79 9.1 10.4 0.9 8.9 10.4 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT NARP1 PF12569.8 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 2.3 7.0 14.9 2.5 6.9 14.9 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Med19 PF10278.9 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 5 7.0 25.7 6.4 6.7 25.7 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Zip PF02535.22 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 6.3 5.9 7.7 7.6 5.6 7.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Macro_2 PF14519.6 NODE_49516_length_376_cov_68.903226_g41625_i0reverse_frame_1 - 0.0051 16.2 0.4 0.0052 16.2 0.4 1.1 1 0 0 1 1 1 1 Macro-like domain Rrp40_N PF18311.1 NODE_49514_length_376_cov_73.395894_g41623_i0forward_frame_1 - 0.14 12.1 0.9 0.21 11.6 0.1 1.8 2 0 0 2 2 2 0 Exosome complex exonuclease Rrp40 N-terminal domain Prok-RING_2 PF14445.6 NODE_49510_length_376_cov_85.782991_g41619_i0reverse_frame_1 - 0.012 15.7 1.0 0.019 15.1 1.0 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 THEG PF14912.6 NODE_49503_length_376_cov_95.976540_g41612_i0reverse_frame_1 - 0.12 12.8 2.9 0.16 12.4 1.2 2.0 1 1 1 2 2 2 0 Testicular haploid expressed repeat GSK-3_bind PF05350.12 NODE_49498_length_376_cov_159.982405_g41607_i0forward_frame_1 - 0.14 11.5 0.1 0.19 11.0 0.1 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding XAF1_C PF18608.1 NODE_49492_length_376_cov_562.844575_g41601_i0forward_frame_1 - 0.75 9.4 5.5 0.38 10.3 0.8 2.2 2 0 0 2 2 2 0 XIAP-associated factor 1 C-terminal domain Orthopox_A5L PF06193.11 NODE_49480_length_377_cov_1.766082_g41590_i0reverse_frame_1 - 0.4 10.1 4.4 0.45 9.9 4.4 1.2 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like Aldedh PF00171.22 NODE_49468_length_377_cov_2.400585_g41578_i0forward_frame_1 - 1.9e-31 109.1 0.0 2e-31 109.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family HMG_box PF00505.19 NODE_49454_length_377_cov_5.777778_g41564_i0reverse_frame_1 - 0.087 13.2 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 HMG (high mobility group) box L27_2 PF09045.10 NODE_49453_length_377_cov_36.637427_g41563_i0reverse_frame_1 - 0.079 12.9 2.2 0.65 10.0 0.2 2.3 2 0 0 2 2 2 0 L27_2 TRAM1 PF08390.11 NODE_49450_length_377_cov_46.456140_g41560_i0reverse_frame_1 - 6.1 6.6 8.5 39 4.0 5.8 2.3 2 0 0 2 2 2 0 TRAM1-like protein MORN PF02493.20 NODE_49448_length_377_cov_56.900585_g41558_i0reverse_frame_1 - 6e-06 25.8 3.1 0.0029 17.4 0.9 2.5 2 0 0 2 2 2 2 MORN repeat WD40 PF00400.32 NODE_49445_length_377_cov_72.002924_g41555_i0reverse_frame_1 - 3.1e-10 40.5 0.0 0.0002 22.1 0.0 2.4 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_49445_length_377_cov_72.002924_g41555_i0reverse_frame_1 - 0.0069 16.7 0.0 0.07 13.4 0.0 2.1 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain TLD PF07534.16 NODE_49439_length_377_cov_84.497076_g41549_i0forward_frame_1 - 5.7e-09 36.3 0.0 7.6e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 TLD TPR_9 PF13371.6 NODE_49436_length_377_cov_93.625731_g41546_i0reverse_frame_1 - 0.00092 19.3 4.0 0.0039 17.3 3.4 2.0 1 1 1 2 2 2 1 Tetratricopeptide repeat UBA_6 PF18039.1 NODE_49432_length_377_cov_134.508772_g41542_i0forward_frame_1 - 0.22 11.5 0.0 0.33 10.9 0.0 1.2 1 0 0 1 1 1 0 UBA-like domain SR-25 PF10500.9 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 4.4e-06 26.5 72.7 8e-06 25.6 72.7 1.4 1 1 0 1 1 1 1 Nuclear RNA-splicing-associated protein Chorion_2 PF03964.15 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 0.005 17.6 8.7 0.006 17.4 8.7 1.2 1 0 0 1 1 1 1 Chorion family 2 DUF4604 PF15377.6 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 0.21 12.0 45.8 0.35 11.3 45.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) DUF3446 PF11928.8 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 1.5 9.2 21.4 2.7 8.3 21.4 1.4 1 0 0 1 1 1 0 Early growth response N-terminal domain SSP160 PF06933.11 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 1.5 6.9 9.5 1.7 6.8 9.5 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 MID_MedPIWI PF18296.1 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 3.8 7.2 17.2 5 6.8 17.2 1.3 1 0 0 1 1 1 0 MID domain of medPIWI PARM PF17061.5 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 3.8 7.6 16.5 4.8 7.2 16.5 1.2 1 0 0 1 1 1 0 PARM SLC12 PF03522.15 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 7.1 5.5 28.1 7.9 5.4 28.1 1.0 1 0 0 1 1 1 0 Solute carrier family 12 Velvet PF11754.8 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 7.1 6.5 18.3 8.5 6.2 18.3 1.2 1 0 0 1 1 1 0 Velvet factor DUF572 PF04502.13 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 8.5 5.9 35.4 9.8 5.7 35.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) DUF3827 PF12877.7 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 9.2 4.5 29.6 11 4.3 29.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Gag_p10 PF02337.17 NODE_49423_length_377_cov_376.792398_g41533_i0forward_frame_1 - 0.073 13.0 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Retroviral GAG p10 protein SCO1-SenC PF02630.14 NODE_49423_length_377_cov_376.792398_g41533_i0forward_frame_1 - 0.19 11.7 2.7 0.26 11.2 2.7 1.2 1 0 0 1 1 1 0 SCO1/SenC O_anti_polymase PF01901.16 NODE_49421_length_377_cov_395.283626_g41531_i0reverse_frame_1 - 2.6 7.2 9.5 3.3 6.9 9.5 1.1 1 0 0 1 1 1 0 Putative O-antigen polymerase HEAT PF02985.22 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 2.7e-10 39.6 0.0 0.036 14.3 0.0 3.4 3 0 0 3 3 3 3 HEAT repeat HEAT_2 PF13646.6 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 1.1e-08 35.3 0.0 3.2e-05 24.2 0.0 2.1 1 1 1 2 2 2 2 HEAT repeats Vac14_Fab1_bd PF12755.7 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 1.5e-06 28.7 0.2 0.0048 17.5 0.2 2.1 1 1 1 2 2 2 2 Vacuolar 14 Fab1-binding region CLASP_N PF12348.8 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 5.6e-05 22.8 0.2 6.9e-05 22.5 0.2 1.0 1 0 0 1 1 1 1 CLASP N terminal Adaptin_N PF01602.20 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 0.0006 18.5 1.0 0.018 13.6 0.9 2.0 1 1 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 0.001 19.1 0.2 0.0045 17.1 0.1 1.8 1 1 1 2 2 2 1 non-SMC mitotic condensation complex subunit 1 Tti2 PF10521.9 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 0.044 13.3 0.1 0.095 12.2 0.0 1.5 1 1 1 2 2 2 0 Tti2 family V-ATPase_H_C PF11698.8 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 0.06 13.5 0.9 8.1 6.6 0.3 2.1 1 1 1 2 2 2 0 V-ATPase subunit H DUF4378 PF14309.6 NODE_49403_length_378_cov_2.209913_g41516_i0forward_frame_1 - 0.012 16.0 0.1 0.013 15.9 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4378) SpoOE-like PF09388.10 NODE_49403_length_378_cov_2.209913_g41516_i0forward_frame_1 - 0.19 11.6 0.1 0.19 11.6 0.1 1.8 2 0 0 2 2 2 0 Spo0E like sporulation regulatory protein GIT_CC PF16559.5 NODE_49402_length_378_cov_2.212828_g41515_i0forward_frame_1 - 0.036 13.9 0.5 0.069 13.0 0.5 1.5 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor DotA PF11388.8 NODE_49402_length_378_cov_2.212828_g41515_i0forward_frame_1 - 0.069 13.4 0.1 0.18 12.0 0.1 1.7 1 1 0 1 1 1 0 Phagosome trafficking protein DotA DUF2205 PF10224.9 NODE_49402_length_378_cov_2.212828_g41515_i0forward_frame_1 - 0.076 13.0 1.2 0.3 11.1 0.4 2.0 2 0 0 2 2 2 0 Short coiled-coil protein XOO_2897-deam PF14440.6 NODE_49392_length_378_cov_2.737609_g41505_i0forward_frame_1 - 0.055 13.6 0.4 0.076 13.1 0.4 1.2 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase Ion_trans_2 PF07885.16 NODE_49387_length_378_cov_3.612245_g41500_i0forward_frame_1 - 3.1e-10 39.9 12.7 1.2e-09 38.0 12.5 1.9 1 1 1 2 2 2 1 Ion channel Ion_trans PF00520.31 NODE_49387_length_378_cov_3.612245_g41500_i0forward_frame_1 - 0.0003 20.1 7.1 0.00048 19.4 7.1 1.3 1 1 0 1 1 1 1 Ion transport protein Peptidase_A24 PF01478.18 NODE_49387_length_378_cov_3.612245_g41500_i0forward_frame_1 - 0.059 13.8 1.4 0.074 13.5 1.4 1.1 1 0 0 1 1 1 0 Type IV leader peptidase family FoP_duplication PF13865.6 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_1 - 7.1 7.3 16.6 10 6.8 16.6 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 OAD_beta PF03977.13 NODE_49369_length_378_cov_74.355685_g41482_i0forward_frame_1 - 0.033 13.2 0.2 0.037 13.0 0.2 1.1 1 0 0 1 1 1 0 Na+-transporting oxaloacetate decarboxylase beta subunit OTT_1508_deam PF14441.6 NODE_49353_length_378_cov_118.760933_g41466_i0forward_frame_1 - 0.013 15.5 0.1 0.02 14.9 0.1 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase DSPc PF00782.20 NODE_49343_length_378_cov_248.037901_g41456_i0reverse_frame_1 - 3.9e-15 55.8 0.0 5.2e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_49343_length_378_cov_248.037901_g41456_i0reverse_frame_1 - 0.0071 15.9 0.0 0.0088 15.6 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DUF727 PF05303.12 NODE_49339_length_378_cov_1042.816327_g41452_i0reverse_frame_1 - 2.7e-06 27.4 1.1 8.2e-06 25.8 1.1 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF727) TniQ PF06527.11 NODE_49329_length_379_cov_1.956395_g41442_i0forward_frame_2 - 0.021 15.5 3.8 0.03 15.0 3.8 1.3 1 0 0 1 1 1 0 TniQ ABC_tran PF00005.27 NODE_49327_length_379_cov_2.212209_g41440_i0forward_frame_3 - 1.1e-06 29.2 0.1 1.4e-06 28.8 0.1 1.1 1 0 0 1 1 1 1 ABC transporter RELT PF12606.8 NODE_49325_length_379_cov_2.284884_g41438_i0reverse_frame_2 - 0.14 11.1 5.6 0.35 9.9 5.6 1.7 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 TP2 PF01254.18 NODE_49324_length_379_cov_2.322674_g41437_i0reverse_frame_2 - 0.00047 20.8 0.3 0.00059 20.5 0.3 1.1 1 0 0 1 1 1 1 Nuclear transition protein 2 Herpes_LMP2 PF07415.11 NODE_49324_length_379_cov_2.322674_g41437_i0reverse_frame_2 - 0.087 11.6 0.8 0.096 11.4 0.8 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein DUF1858 PF08984.11 NODE_49324_length_379_cov_2.322674_g41437_i0forward_frame_2 - 0.21 11.8 0.0 0.3 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1858) DUF3391 PF11871.8 NODE_49322_length_379_cov_2.392442_g41435_i0reverse_frame_2 - 3.7 8.1 8.5 6 7.4 8.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3391) Toxin_15 PF07906.13 NODE_49319_length_379_cov_2.502907_g41432_i0forward_frame_2 - 2.7e-08 33.7 0.8 2.9e-08 33.6 0.8 1.1 1 0 0 1 1 1 1 ShET2 enterotoxin, N-terminal region Pkinase PF00069.25 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 5.4e-37 127.6 0.0 5.7e-37 127.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 9.1e-20 71.0 0.0 9.5e-20 71.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 8e-06 25.4 0.0 1e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 0.05 12.6 0.0 0.056 12.4 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 0.071 12.5 0.1 0.082 12.2 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family ABC_membrane PF00664.23 NODE_49317_length_379_cov_2.601744_g41430_i0reverse_frame_3 - 2.8e-11 43.6 6.6 3.2e-11 43.4 6.6 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Fucokinase PF07959.12 NODE_49317_length_379_cov_2.601744_g41430_i0reverse_frame_3 - 0.029 13.3 0.1 0.033 13.1 0.1 1.1 1 0 0 1 1 1 0 L-fucokinase DUF2208 PF09973.9 NODE_49317_length_379_cov_2.601744_g41430_i0reverse_frame_3 - 1.1 8.8 9.4 11 5.6 0.1 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2208) PAS_2 PF08446.11 NODE_49317_length_379_cov_2.601744_g41430_i0forward_frame_2 - 0.047 14.4 0.1 0.067 13.9 0.1 1.2 1 0 0 1 1 1 0 PAS fold DHHC PF01529.20 NODE_49314_length_379_cov_3.026163_g41427_i0forward_frame_2 - 4.1 7.5 6.8 1.9 8.6 4.6 1.5 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF3915 PF13054.6 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_3 - 0.043 13.8 0.1 0.058 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF3915 PF13054.6 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_2 - 0.056 13.4 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) FAM27 PF15832.5 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_2 - 0.097 13.2 6.3 0.097 13.2 6.3 3.1 3 1 0 3 3 3 0 FAM27 D and E protein family IAT_beta PF11924.8 NODE_49310_length_379_cov_3.601744_g41423_i0forward_frame_2 - 2.3e-49 168.3 0.1 2.7e-49 168.1 0.1 1.0 1 0 0 1 1 1 1 Inverse autotransporter, beta-domain zf-RNPHF PF08080.12 NODE_49310_length_379_cov_3.601744_g41423_i0forward_frame_2 - 0.24 11.4 0.5 30 4.7 0.2 2.6 2 1 1 3 3 3 0 RNPHF zinc finger Methyltransf_28 PF02636.17 NODE_49309_length_379_cov_4.758721_g41422_i0forward_frame_2 - 0.12 12.0 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Pkinase PF00069.25 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_3 - 0.018 14.4 0.1 0.026 13.9 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain NPBW PF15180.6 NODE_49305_length_379_cov_48.921512_g41418_i0reverse_frame_3 - 0.059 13.2 1.4 0.074 12.9 0.3 1.6 1 1 0 2 2 2 0 Neuropeptides B and W DUF2407_C PF13373.6 NODE_49304_length_379_cov_52.026163_g41417_i0forward_frame_2 - 2 8.6 6.9 3 8.0 1.4 2.0 1 1 1 2 2 2 0 DUF2407 C-terminal domain DUF3949 PF13133.6 NODE_49302_length_379_cov_56.223837_g41415_i0reverse_frame_3 - 0.061 13.8 0.6 0.17 12.3 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3949) TFIID-31kDa PF02291.15 NODE_49302_length_379_cov_56.223837_g41415_i0reverse_frame_3 - 0.085 12.9 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Ribosomal_S4e PF00900.20 NODE_49290_length_379_cov_101.767442_g41403_i0reverse_frame_3 - 0.021 14.7 0.0 0.038 13.9 0.0 1.4 1 0 0 1 1 1 0 Ribosomal family S4e GRDP-like PF07173.12 NODE_49281_length_379_cov_172.604651_g41394_i0reverse_frame_3 - 0.0076 16.9 0.0 0.011 16.5 0.0 1.3 1 0 0 1 1 1 1 Glycine-rich domain-containing protein-like DUF5136 PF17199.4 NODE_49280_length_379_cov_188.674419_g41393_i0reverse_frame_2 - 0.057 13.1 0.6 0.12 12.1 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF5136) Herpes_UL92 PF03048.14 NODE_49275_length_379_cov_248.345930_g41388_i0forward_frame_2 - 0.13 12.1 5.5 2.6 7.8 1.5 2.1 2 0 0 2 2 2 0 UL92 family zf-LITAF-like PF10601.9 NODE_49275_length_379_cov_248.345930_g41388_i0forward_frame_2 - 8.1 6.8 9.1 3.4 8.0 1.3 2.4 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain APT PF03440.14 NODE_49273_length_379_cov_260.770349_g41386_i0forward_frame_3 - 0.0036 17.2 0.0 0.0055 16.6 0.0 1.2 1 0 0 1 1 1 1 Aerolysin/Pertussis toxin (APT) domain DUF2475 PF10629.9 NODE_49266_length_379_cov_881.764535_g41380_i0forward_frame_3 - 7.4e-08 32.5 3.4 6.2e-05 23.1 0.6 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF2475) Tagatose_6_P_K PF08013.11 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 0.043 12.5 0.2 0.053 12.2 0.2 1.1 1 0 0 1 1 1 0 Tagatose 6 phosphate kinase CDC45 PF02724.14 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 0.29 9.4 10.0 0.27 9.5 10.0 1.0 1 0 0 1 1 1 0 CDC45-like protein Pox_Ag35 PF03286.14 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 0.61 9.8 11.3 0.68 9.7 11.3 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF2828 PF11443.8 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 0.9 7.6 7.6 0.97 7.4 7.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) HSP70 PF00012.20 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 1.3 7.1 10.0 1.3 7.1 10.0 1.1 1 0 0 1 1 1 0 Hsp70 protein Sec62 PF03839.16 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 1.6 8.2 8.0 1.6 8.2 8.0 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Connexin PF00029.19 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 2.2 8.0 6.6 2.9 7.6 6.6 1.2 1 0 0 1 1 1 0 Connexin FancD2 PF14631.6 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 2.9 5.2 8.0 3 5.1 8.0 1.0 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease DUF4337 PF14235.6 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 3.6 7.7 7.8 4.2 7.5 7.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Presenilin PF01080.17 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 3.6 6.2 6.8 3.8 6.2 6.8 1.1 1 0 0 1 1 1 0 Presenilin MDM10 PF12519.8 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 6.7 5.5 5.9 6.3 5.6 5.9 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 Androgen_recep PF02166.16 NODE_49258_length_380_cov_1.269565_g41372_i0reverse_frame_3 - 0.12 11.2 0.3 0.12 11.2 0.3 1.1 1 0 0 1 1 1 0 Androgen receptor RuvB_C PF05491.13 NODE_49257_length_380_cov_1.434783_g41371_i0reverse_frame_3 - 0.15 12.0 1.3 0.7 9.8 0.3 2.1 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain ArgoL1 PF08699.10 NODE_49251_length_380_cov_2.023188_g41365_i0reverse_frame_3 - 0.13 12.0 0.1 0.22 11.2 0.1 1.4 1 0 0 1 1 1 0 Argonaute linker 1 domain E1-E2_ATPase PF00122.20 NODE_49251_length_380_cov_2.023188_g41365_i0reverse_frame_2 - 0.1 12.1 0.1 0.1 12.1 0.1 1.7 1 1 1 2 2 2 0 E1-E2 ATPase TetR_C_19 PF17924.1 NODE_49251_length_380_cov_2.023188_g41365_i0reverse_frame_2 - 0.18 12.4 0.1 0.18 12.4 0.1 1.5 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain SAYSvFN PF10260.9 NODE_49251_length_380_cov_2.023188_g41365_i0reverse_frame_2 - 0.41 10.6 0.2 0.41 10.6 0.2 2.5 3 1 0 3 3 3 0 Uncharacterized conserved domain (SAYSvFN) Molybdopterin PF00384.22 NODE_49244_length_380_cov_2.353623_g41358_i0reverse_frame_2 - 2.8e-10 39.7 0.0 3.4e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase EcoRI PF02963.16 NODE_49241_length_380_cov_2.431884_g41355_i0reverse_frame_2 - 0.21 10.6 0.0 0.37 9.7 0.0 1.5 1 1 1 2 2 2 0 Restriction endonuclease EcoRI 7TMR-DISM_7TM PF07695.11 NODE_49241_length_380_cov_2.431884_g41355_i0forward_frame_2 - 0.22 11.4 1.3 0.3 11.0 1.3 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling RTBV_P12 PF06361.11 NODE_49240_length_380_cov_2.510145_g41354_i0reverse_frame_2 - 0.13 12.7 0.0 0.18 12.2 0.0 1.1 1 0 0 1 1 1 0 Rice tungro bacilliform virus P12 protein Lipocalin_2 PF08212.12 NODE_49238_length_380_cov_2.544928_g41352_i0forward_frame_3 - 2.1e-32 112.0 0.0 2.4e-32 111.9 0.0 1.0 1 0 0 1 1 1 1 Lipocalin-like domain Lipocalin PF00061.23 NODE_49238_length_380_cov_2.544928_g41352_i0forward_frame_3 - 0.0019 18.4 0.0 0.0021 18.3 0.0 1.1 1 0 0 1 1 1 1 Lipocalin / cytosolic fatty-acid binding protein family Euplotes_phero PF05842.11 NODE_49230_length_380_cov_43.063768_g41344_i0forward_frame_3 - 0.095 13.3 0.1 0.17 12.5 0.1 1.4 1 0 0 1 1 1 0 Euplotes octocarinatus mating pheromone protein Ank_2 PF12796.7 NODE_49230_length_380_cov_43.063768_g41344_i0forward_frame_2 - 1.8e-11 44.5 0.0 2.9e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_49230_length_380_cov_43.063768_g41344_i0forward_frame_2 - 6.8e-09 35.3 0.1 0.0017 18.7 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 NODE_49230_length_380_cov_43.063768_g41344_i0forward_frame_2 - 3e-07 30.6 0.0 0.03 14.8 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_49230_length_380_cov_43.063768_g41344_i0forward_frame_2 - 9.3e-07 29.0 0.0 5.2e-05 23.4 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_49230_length_380_cov_43.063768_g41344_i0forward_frame_2 - 1.1e-06 29.0 0.1 3e-06 27.6 0.1 1.8 1 1 0 1 1 1 1 Ankyrin repeats (many copies) DUF3094 PF11293.8 NODE_49230_length_380_cov_43.063768_g41344_i0forward_frame_2 - 0.19 11.5 0.0 3.9 7.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) Plant_NMP1 PF06694.11 NODE_49229_length_380_cov_44.060870_g41343_i0reverse_frame_2 - 0.017 14.3 0.0 0.017 14.3 0.0 1.1 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) DUF4679 PF15728.5 NODE_49225_length_380_cov_56.539130_g41339_i0reverse_frame_3 - 0.025 13.6 1.7 0.029 13.4 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) FAM176 PF14851.6 NODE_49225_length_380_cov_56.539130_g41339_i0reverse_frame_3 - 0.039 13.6 2.9 0.05 13.3 2.9 1.2 1 0 0 1 1 1 0 FAM176 family GxGYxYP_C PF14323.6 NODE_49225_length_380_cov_56.539130_g41339_i0reverse_frame_3 - 0.064 13.1 1.9 0.078 12.8 1.9 1.0 1 0 0 1 1 1 0 GxGYxYP putative glycoside hydrolase C-terminal domain PSP1 PF04468.12 NODE_49223_length_380_cov_60.034783_g41337_i0reverse_frame_2 - 0.11 12.8 0.1 0.17 12.2 0.1 1.3 1 0 0 1 1 1 0 PSP1 C-terminal conserved region DUF1829 PF08862.10 NODE_49218_length_380_cov_68.426087_g41332_i0reverse_frame_2 - 0.017 15.6 0.1 0.031 14.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF1829 Phage_CP76 PF06892.11 NODE_49216_length_380_cov_71.055072_g41330_i0forward_frame_3 - 0.018 14.6 0.2 0.023 14.2 0.2 1.1 1 0 0 1 1 1 0 Phage regulatory protein CII (CP76) DUF2457 PF10446.9 NODE_49215_length_380_cov_71.852174_g41329_i0reverse_frame_3 - 0.046 12.9 10.2 0.053 12.7 10.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) GH43_C PF16369.5 NODE_49215_length_380_cov_71.852174_g41329_i0reverse_frame_3 - 0.19 12.3 2.5 0.27 11.9 2.5 1.5 1 1 0 1 1 1 0 C-terminal lipocalin-like domain ABC2_membrane PF01061.24 NODE_49214_length_380_cov_73.652174_g41328_i0forward_frame_3 - 2e-06 27.4 1.2 2e-06 27.4 1.2 1.9 2 0 0 2 2 2 1 ABC-2 type transporter DUF2661 PF10860.8 NODE_49210_length_380_cov_75.666667_g41324_i0reverse_frame_3 - 0.022 14.8 1.8 0.12 12.5 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2661) Importin_rep_2 PF18786.1 NODE_49203_length_380_cov_96.602899_g41317_i0reverse_frame_3 - 0.13 12.1 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Importin 13 repeat zf-C3HC4_3 PF13920.6 NODE_49203_length_380_cov_96.602899_g41317_i0forward_frame_2 - 0.022 14.6 4.7 0.098 12.5 4.7 2.2 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_49203_length_380_cov_96.602899_g41317_i0forward_frame_2 - 0.17 11.8 4.8 0.5 10.3 4.8 1.9 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-Di19 PF05605.12 NODE_49203_length_380_cov_96.602899_g41317_i0forward_frame_2 - 2.4 8.5 6.8 6.5 7.1 1.0 2.5 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Planc_extracel PF07595.12 NODE_49199_length_380_cov_133.423188_g41313_i0reverse_frame_3 - 0.039 13.7 0.8 8.6 6.4 0.1 2.5 2 0 0 2 2 2 0 Planctomycete extracellular EF-hand_6 PF13405.6 NODE_49197_length_380_cov_154.171014_g41311_i0forward_frame_2 - 0.071 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 NODE_49197_length_380_cov_154.171014_g41311_i0forward_frame_2 - 0.15 11.6 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 EF hand LSM PF01423.22 NODE_49190_length_380_cov_275.698551_g41304_i0forward_frame_2 - 2e-12 46.6 0.1 2.7e-12 46.2 0.1 1.2 1 0 0 1 1 1 1 LSM domain HMG_box PF00505.19 NODE_49186_length_380_cov_601.750725_g41300_i0reverse_frame_3 - 9.1e-14 51.6 5.0 1.3e-13 51.2 5.0 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_49186_length_380_cov_601.750725_g41300_i0reverse_frame_3 - 1.9e-09 37.9 6.0 3.4e-09 37.2 6.0 1.4 1 0 0 1 1 1 1 HMG-box domain Protamine_like PF06382.11 NODE_49186_length_380_cov_601.750725_g41300_i0reverse_frame_3 - 0.073 13.3 2.4 0.098 12.8 2.4 1.3 1 1 0 1 1 1 0 Protamine and protamine like HMG_box PF00505.19 NODE_49183_length_380_cov_2299.411594_g41297_i0reverse_frame_3 - 9.1e-09 35.6 0.2 9.1e-09 35.6 0.2 1.5 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_49183_length_380_cov_2299.411594_g41297_i0reverse_frame_3 - 5.2e-05 23.8 0.1 8.8e-05 23.0 0.1 1.4 1 0 0 1 1 1 1 HMG-box domain ResB PF05140.14 NODE_49182_length_380_cov_2565.820290_g41296_i0reverse_frame_3 - 0.67 8.6 2.1 0.84 8.3 2.1 1.1 1 0 0 1 1 1 0 ResB-like family eIF-3_zeta PF05091.12 NODE_49182_length_380_cov_2565.820290_g41296_i0forward_frame_2 - 3.1 6.7 10.7 3.5 6.5 10.7 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Z1 PF10593.9 NODE_49181_length_381_cov_1.442197_g41295_i0forward_frame_2 - 0.16 11.5 3.8 0.18 11.3 3.8 1.1 1 0 0 1 1 1 0 Z1 domain TMEM51 PF15345.6 NODE_49181_length_381_cov_1.442197_g41295_i0forward_frame_2 - 0.35 10.7 5.5 0.42 10.4 5.5 1.3 1 0 0 1 1 1 0 Transmembrane protein 51 Mit_KHE1 PF10173.9 NODE_49181_length_381_cov_1.442197_g41295_i0forward_frame_2 - 1.5 8.8 6.5 2.1 8.4 6.5 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Protamine_3 PF08188.11 NODE_49179_length_381_cov_1.687861_g41293_i0forward_frame_3 - 0.66 10.2 6.7 4.9 7.4 0.1 2.8 3 1 0 3 3 3 0 Spermatozal protamine family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks183.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks183.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks183.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks183.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:15 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NTP_transferase PF00483.23 NODE_49172_length_381_cov_2.369942_g41286_i0forward_frame_3 - 1.1e-20 74.3 0.2 1.3e-20 74.1 0.2 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase DUF2732 PF10809.8 NODE_49170_length_381_cov_2.427746_g41284_i0forward_frame_2 - 0.15 11.9 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2732) DUF3930 PF13067.6 NODE_49169_length_381_cov_2.459538_g41283_i0forward_frame_2 - 0.093 13.0 0.1 0.17 12.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3930) DUF4942 PF13708.6 NODE_49168_length_381_cov_2.632948_g41282_i0reverse_frame_2 - 0.015 15.2 0.5 0.016 15.2 0.5 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4942) DUF19 PF01579.18 NODE_49168_length_381_cov_2.632948_g41282_i0reverse_frame_2 - 0.042 13.7 0.4 0.053 13.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF19) SusD-like_3 PF14322.6 NODE_49168_length_381_cov_2.632948_g41282_i0reverse_frame_2 - 0.049 13.9 0.2 0.061 13.6 0.2 1.1 1 0 0 1 1 1 0 Starch-binding associating with outer membrane DUF3378 PF11858.8 NODE_49168_length_381_cov_2.632948_g41282_i0reverse_frame_2 - 0.1 12.7 0.1 0.19 11.9 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3378) GFA PF04828.14 NODE_49166_length_381_cov_2.673410_g41280_i0reverse_frame_3 - 0.026 14.8 3.0 0.026 14.8 3.0 1.7 2 0 0 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Choline_kinase PF01633.20 NODE_49166_length_381_cov_2.673410_g41280_i0reverse_frame_3 - 0.097 12.2 2.7 0.13 11.9 2.7 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase IQ PF00612.27 NODE_49165_length_381_cov_2.705202_g41279_i0reverse_frame_2 - 0.0036 17.0 7.2 0.0061 16.3 0.1 3.4 3 0 0 3 3 3 1 IQ calmodulin-binding motif BSD PF03909.17 NODE_49165_length_381_cov_2.705202_g41279_i0reverse_frame_2 - 0.039 14.0 1.0 3.2 7.8 0.1 2.3 2 0 0 2 2 2 0 BSD domain Sugar_tr PF00083.24 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 2.7e-17 62.8 12.2 3.2e-17 62.5 12.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 4.1e-17 62.1 17.3 4.4e-17 62.1 17.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_5 PF05631.14 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 0.00053 19.0 1.5 0.00061 18.8 1.5 1.1 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM TRI12 PF06609.13 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 0.0039 15.7 2.1 0.0045 15.5 2.1 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) UPF0029 PF01205.19 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 0.19 12.1 0.1 0.26 11.7 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein family UPF0029 ATP19 PF11022.8 NODE_49160_length_381_cov_3.404624_g41274_i0reverse_frame_2 - 0.11 12.9 1.3 0.22 11.9 1.3 1.6 1 0 0 1 1 1 0 ATP synthase subunit K DUF2842 PF11003.8 NODE_49160_length_381_cov_3.404624_g41274_i0forward_frame_3 - 1.3 9.3 7.5 2.6 8.4 1.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2842) SDF PF00375.18 NODE_49158_length_381_cov_4.002890_g41272_i0forward_frame_3 - 5.5e-18 65.2 2.9 5.5e-18 65.2 2.9 1.4 2 0 0 2 2 2 1 Sodium:dicarboxylate symporter family Vma12 PF11712.8 NODE_49158_length_381_cov_4.002890_g41272_i0forward_frame_3 - 0.0029 17.7 0.1 0.0049 16.9 0.1 1.3 1 0 0 1 1 1 1 Endoplasmic reticulum-based factor for assembly of V-ATPase Ac76 PF05814.11 NODE_49158_length_381_cov_4.002890_g41272_i0forward_frame_3 - 0.35 10.9 2.7 1.4 9.0 0.3 2.2 2 0 0 2 2 2 0 Orf76 (Ac76) PsbI PF02532.14 NODE_49156_length_381_cov_6.771676_g41270_i0forward_frame_2 - 0.07 13.1 0.6 0.07 13.1 0.6 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) Pap_E4 PF02711.14 NODE_49155_length_381_cov_9.106936_g41269_i0reverse_frame_2 - 0.91 10.5 3.6 1.4 9.9 3.6 1.3 1 0 0 1 1 1 0 E4 protein Ureide_permease PF07168.11 NODE_49153_length_381_cov_47.017341_g41267_i0reverse_frame_2 - 0.75 8.5 2.5 0.97 8.1 2.5 1.2 1 0 0 1 1 1 0 Ureide permease FPN1 PF06963.12 NODE_49153_length_381_cov_47.017341_g41267_i0reverse_frame_2 - 0.97 7.9 1.6 1.2 7.6 1.6 1.0 1 0 0 1 1 1 0 Ferroportin1 (FPN1) Fibrinogen_BP PF08017.11 NODE_49143_length_381_cov_72.355491_g41257_i0reverse_frame_3 - 0.078 11.4 0.4 0.11 10.9 0.4 1.2 1 0 0 1 1 1 0 Fibrinogen binding protein Toxin_29 PF08116.11 NODE_49139_length_381_cov_74.673410_g41253_i0forward_frame_3 - 0.33 11.0 3.8 0.84 9.7 3.8 1.7 1 0 0 1 1 1 0 PhTx neurotoxin family SDH_sah PF01972.16 NODE_49136_length_381_cov_79.083815_g41250_i0reverse_frame_3 - 0.23 10.4 0.1 0.28 10.1 0.1 1.1 1 0 0 1 1 1 0 Serine dehydrogenase proteinase Tma16 PF11176.8 NODE_49135_length_381_cov_79.838150_g41249_i0reverse_frame_2 - 0.028 14.3 2.4 0.039 13.8 2.4 1.1 1 0 0 1 1 1 0 Translation machinery-associated protein 16 Spc110_C PF18520.1 NODE_49135_length_381_cov_79.838150_g41249_i0reverse_frame_2 - 1.4 8.5 6.7 0.47 10.1 0.8 2.3 1 1 1 2 2 2 0 Spindle pole body component 110 C-terminal domain TACI-CRD2 PF09305.10 NODE_49128_length_381_cov_94.020231_g41243_i0reverse_frame_2 - 0.048 13.7 6.4 0.58 10.2 0.5 2.7 2 0 0 2 2 2 0 TACI, cysteine-rich domain dCMP_cyt_deam_2 PF08211.12 NODE_49127_length_381_cov_95.725434_g41242_i0forward_frame_2 - 0.017 15.3 0.0 0.023 14.9 0.0 1.2 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region zf_C2H2_6 PF18450.1 NODE_49126_length_381_cov_101.560694_g41241_i0reverse_frame_3 - 0.084 12.6 0.9 0.15 11.8 0.9 1.3 1 0 0 1 1 1 0 Zinc Finger domain Pkinase PF00069.25 NODE_49124_length_381_cov_105.161850_g41239_i0reverse_frame_2 - 3.5e-15 56.1 0.1 4.1e-15 55.9 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49124_length_381_cov_105.161850_g41239_i0reverse_frame_2 - 2.5e-08 33.6 0.0 2.8e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase PRR20 PF15708.5 NODE_49119_length_381_cov_120.135838_g41234_i0reverse_frame_3 - 0.064 13.1 0.9 0.08 12.8 0.9 1.2 1 0 0 1 1 1 0 Proline-rich protein family 20 CCDC106 PF15794.5 NODE_49119_length_381_cov_120.135838_g41234_i0reverse_frame_3 - 3.6 7.2 11.3 6.6 6.4 0.7 2.0 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 106 Rrn6 PF10214.9 NODE_49109_length_381_cov_177.690751_g41224_i0reverse_frame_2 - 0.086 11.3 0.2 0.1 11.1 0.2 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Cytochrome_CBB3 PF13442.6 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.012 15.9 0.3 0.026 14.9 0.3 1.6 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III DUF2613 PF11021.8 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.12 12.6 0.5 0.12 12.6 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) Cytochrom_C PF00034.21 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.12 13.5 0.5 0.22 12.7 0.5 1.4 1 0 0 1 1 1 0 Cytochrome c Cytochrom_C550 PF14495.6 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.19 11.4 0.0 0.37 10.5 0.0 1.4 2 0 0 2 2 2 0 Cytochrome c-550 domain CD99L2 PF12301.8 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.21 11.9 0.0 0.31 11.3 0.0 1.3 1 0 0 1 1 1 0 CD99 antigen like protein 2 Oxidored_q5_N PF01059.17 NODE_49101_length_381_cov_1771.098266_g41216_i0forward_frame_3 - 7.2 6.8 9.5 22 5.2 5.1 2.3 2 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Opi1 PF08618.10 ORF98950 - 1.2 8.4 5.7 1.4 8.1 5.7 1.0 1 0 0 1 1 1 0 Transcription factor Opi1 CCAP PF11105.8 ORF98677 - 0.018 15.0 1.1 0.018 15.0 1.1 2.0 1 1 1 2 2 2 0 Arthropod cardioacceleratory peptide 2a WXG100 PF06013.12 ORF98677 - 0.035 14.3 0.7 0.035 14.3 0.7 2.0 2 1 0 2 2 2 0 Proteins of 100 residues with WXG DUF1640 PF07798.11 ORF98677 - 0.046 13.8 9.7 0.054 13.6 9.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) GLTSCR1 PF15249.6 ORF98677 - 0.075 13.5 6.4 0.15 12.5 6.4 1.4 1 0 0 1 1 1 0 Conserved region of unknown function on GLTSCR protein Fib_alpha PF08702.10 ORF98677 - 0.11 12.7 15.7 0.045 13.9 12.9 1.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 ORF98677 - 0.16 12.0 7.2 0.27 11.3 7.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) ADIP PF11559.8 ORF98677 - 0.19 11.8 13.1 0.14 12.2 11.9 1.4 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF724 PF05266.14 ORF98677 - 0.21 11.4 11.4 0.3 10.9 11.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) FlaC_arch PF05377.11 ORF98677 - 0.48 10.8 8.4 0.34 11.3 4.9 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Atg14 PF10186.9 ORF98677 - 0.58 9.2 18.1 0.95 8.5 18.1 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Laminin_II PF06009.12 ORF98677 - 0.65 10.0 8.8 0.11 12.6 2.9 2.2 1 1 1 2 2 2 0 Laminin Domain II HAUS6_N PF14661.6 ORF98677 - 1.2 8.7 10.1 1.3 8.5 10.1 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus YabA PF06156.13 ORF98677 - 1.6 9.4 13.2 0.42 11.3 9.1 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF16 PF01519.16 ORF98677 - 1.9 9.0 14.8 0.4 11.2 11.5 1.6 2 0 0 2 2 2 0 Protein of unknown function DUF16 DUF4407 PF14362.6 ORF98677 - 2.1 7.6 6.8 2.3 7.5 6.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FapA PF03961.13 ORF98677 - 2.9 6.4 14.8 3 6.3 14.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Exonuc_VII_L PF02601.15 ORF98677 - 3.5 7.1 9.4 3.9 7.0 9.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4094 PF13334.6 ORF98677 - 4 7.9 6.5 6.2 7.3 6.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) TMPIT PF07851.13 ORF98677 - 7 5.8 11.3 6.9 5.8 11.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF3801 PF12687.7 ORF98677 - 9.5 6.3 13.6 82 3.2 13.0 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3801) Seryl_tRNA_N PF02403.22 ORF98677 - 9.7 6.5 16.7 2.4 8.5 13.0 1.8 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain SPATA19 PF15212.6 ORF98672 - 0.014 15.6 0.9 0.027 14.7 0.2 1.7 1 1 1 2 2 2 0 Spermatogenesis-associated protein 19, mitochondrial DUF5496 PF17600.2 ORF98672 - 0.052 13.6 0.1 0.081 13.0 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5496) DUF3496 PF12001.8 ORF98672 - 0.14 12.6 5.9 0.23 11.8 5.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) Vfa1 PF08432.10 ORF98492 - 0.075 13.4 0.8 0.1 12.9 0.8 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 She9_MDM33 PF05546.11 ORF97356 - 0.021 14.6 0.2 0.03 14.1 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF97356 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF97356 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger Aa_trans PF01490.18 ORF97214 - 0.0048 15.6 5.5 0.0072 15.1 1.2 2.0 1 1 1 2 2 2 2 Transmembrane amino acid transporter protein C1_1 PF00130.22 ORF95105 - 0.017 15.0 0.9 0.32 10.9 0.0 2.2 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) CTNNB1_binding PF08347.11 ORF93844 - 0.043 14.0 4.5 0.056 13.6 4.5 1.1 1 0 0 1 1 1 0 N-terminal CTNNB1 binding COMM_domain PF07258.14 ORF93844 - 0.059 13.5 1.7 1 9.5 1.2 2.2 1 1 1 2 2 2 0 COMM domain Asp_decarbox PF02261.16 ORF9373 - 2.1e-47 159.8 0.0 2.3e-47 159.7 0.0 1.0 1 0 0 1 1 1 1 Aspartate decarboxylase She9_MDM33 PF05546.11 ORF91754 - 0.05 13.4 0.2 0.07 12.9 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF91754 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF91754 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger Ank_4 PF13637.6 ORF9168 - 8.1e-11 42.2 0.4 1.9e-07 31.5 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF9168 - 6e-10 39.6 0.1 1.4e-09 38.4 0.1 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF9168 - 6.1e-07 29.3 0.1 0.0024 18.2 0.0 2.8 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF9168 - 7.4e-07 29.3 0.5 0.0016 18.7 0.1 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF9168 - 8.3e-05 22.9 0.4 0.49 10.9 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat TMF_TATA_bd PF12325.8 ORF91439 - 0.017 15.4 0.3 0.024 14.8 0.1 1.4 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DivIC PF04977.15 ORF91439 - 0.024 14.4 3.1 2.8 7.8 0.3 2.2 2 0 0 2 2 2 0 Septum formation initiator She9_MDM33 PF05546.11 ORF91134 - 0.021 14.6 0.2 0.03 14.1 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF91134 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF91134 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger Tti2 PF10521.9 ORF91047 - 0.031 13.8 0.1 0.035 13.7 0.1 1.0 1 0 0 1 1 1 0 Tti2 family RIFIN PF02009.16 ORF91047 - 0.068 13.1 0.1 0.075 12.9 0.1 1.1 1 0 0 1 1 1 0 Rifin DUF4337 PF14235.6 ORF91047 - 0.086 13.0 3.9 0.1 12.7 3.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF2157 PF09925.9 ORF91047 - 0.092 12.5 2.1 0.12 12.2 2.1 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF2207 PF09972.9 ORF91047 - 0.12 11.2 0.0 0.13 11.0 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Scs3p PF10261.9 ORF91047 - 0.2 11.2 0.4 0.24 10.9 0.4 1.1 1 0 0 1 1 1 0 Inositol phospholipid synthesis and fat-storage-inducing TM MUG113 PF13455.6 ORF89724 - 0.31 11.8 6.1 0.15 12.7 3.2 1.9 1 1 1 2 2 2 0 Meiotically up-regulated gene 113 UDPGP PF01704.18 ORF8913 - 2.6e-11 42.8 0.1 2.7e-11 42.8 0.1 1.0 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase Cauli_AT PF03233.13 ORF8913 - 0.027 14.4 0.1 0.032 14.2 0.1 1.1 1 0 0 1 1 1 0 Aphid transmission protein BCL_N PF04714.13 ORF8913 - 0.029 14.4 0.0 0.047 13.7 0.0 1.4 1 0 0 1 1 1 0 BCL7, N-terminal conserver region DUF4728 PF15860.5 ORF88481 - 0.071 13.8 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4728) DRE2_N PF16803.5 ORF88263 - 0.00046 20.4 0.3 0.00068 19.9 0.3 1.4 1 1 0 1 1 1 1 Fe-S cluster assembly protein DRE2 N-terminus BCDHK_Adom3 PF10436.9 ORF88263 - 0.041 13.7 0.2 0.049 13.5 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase She9_MDM33 PF05546.11 ORF87634 - 0.05 13.4 0.2 0.07 12.9 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF87634 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF87634 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger TssO PF17561.2 ORF86954 - 0.045 13.9 1.5 1.8 8.7 0.4 2.1 1 1 1 2 2 2 0 Type VI secretion system, TssO MNR PF15718.5 ORF86342 - 2 6.4 6.0 2.1 6.4 6.0 1.1 1 0 0 1 1 1 0 Protein moonraker IL28A PF15177.6 ORF84929 - 0.48 10.3 8.2 0.71 9.7 8.2 1.4 1 1 0 1 1 1 0 Interleukin-28A HEAT_2 PF13646.6 ORF8181 - 7e-13 48.8 3.3 5e-07 30.0 0.2 2.0 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF8181 - 4.5e-05 23.4 0.2 0.24 11.8 0.0 3.2 3 0 0 3 3 3 2 HEAT repeat Cnd1 PF12717.7 ORF8181 - 0.034 14.2 0.0 0.15 12.1 0.1 1.8 1 1 1 2 2 2 0 non-SMC mitotic condensation complex subunit 1 M16C_assoc PF08367.11 ORF81397 - 0.017 14.2 0.5 0.035 13.2 0.0 1.6 2 0 0 2 2 2 0 Peptidase M16C associated Zn_Tnp_IS91 PF14319.6 ORF80944 - 0.0037 17.3 0.1 0.0053 16.8 0.1 1.2 1 0 0 1 1 1 1 Transposase zinc-binding domain SPATA24 PF15175.6 ORF80589 - 0.0035 17.3 2.6 0.0039 17.1 2.6 1.3 1 0 0 1 1 1 1 Spermatogenesis-associated protein 24 Fib_alpha PF08702.10 ORF80589 - 0.0035 17.5 6.6 0.0037 17.5 5.7 1.4 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family HMMR_N PF15905.5 ORF80589 - 0.013 15.0 4.7 0.014 14.9 4.7 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal TPD52 PF04201.15 ORF80589 - 0.024 14.2 0.4 0.03 13.9 0.4 1.2 1 0 0 1 1 1 0 Tumour protein D52 family DUF641 PF04859.12 ORF80589 - 0.039 14.3 2.6 0.068 13.5 2.6 1.5 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) CCDC74_C PF14917.6 ORF80589 - 0.043 14.3 0.3 0.049 14.2 0.3 1.3 1 0 0 1 1 1 0 Coiled coil protein 74, C terminal XLF PF09302.11 ORF80589 - 0.048 13.8 3.9 0.07 13.3 3.9 1.2 1 0 0 1 1 1 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Oberon_cc PF16312.5 ORF80589 - 0.072 13.0 4.6 0.049 13.6 3.0 1.5 2 0 0 2 2 2 0 Coiled-coil region of Oberon PKcGMP_CC PF16808.5 ORF80589 - 0.11 12.4 8.4 0.093 12.6 3.7 2.7 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Ly49 PF08391.10 ORF80589 - 1.2 9.5 7.7 1.6 9.1 7.7 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region AlphaC_C PF17480.2 ORF80589 - 1.3 9.1 5.9 2.4 8.2 1.5 3.0 1 1 2 3 3 3 0 AlphaC C-terminal VirE_N PF08800.10 ORF80428 - 0.089 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 VirE N-terminal domain SpoVS PF04232.12 ORF80421 - 3.2e-08 33.2 1.3 4.7e-08 32.6 1.3 1.3 1 0 0 1 1 1 1 Stage V sporulation protein S (SpoVS) Lipoprotein_2 PF00921.17 ORF80421 - 0.059 12.9 3.2 0.067 12.7 3.2 1.1 1 0 0 1 1 1 0 Borrelia lipoprotein DUF745 PF05335.13 ORF78070 - 0.038 13.7 0.6 0.043 13.5 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) Med2 PF11214.8 ORF78070 - 0.063 13.4 7.3 0.18 12.0 6.5 2.1 1 1 0 1 1 1 0 Mediator complex subunit 2 AsnC_trans_reg2 PF17805.1 ORF78070 - 0.13 12.5 0.9 0.29 11.3 0.9 1.6 1 1 0 1 1 1 0 AsnC-like ligand binding domain EMP24_GP25L PF01105.24 ORF78070 - 0.37 10.7 8.2 0.43 10.5 8.2 1.1 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD UPF0242 PF06785.11 ORF78070 - 0.56 10.3 10.8 0.66 10.1 10.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus SRP1_TIP1 PF00660.17 ORF77301 - 0.05 13.7 0.1 0.095 12.8 0.1 1.5 1 0 0 1 1 1 0 Seripauperin and TIP1 family DUF4713 PF15831.5 ORF76443 - 1.4 9.4 13.2 6.8 7.2 8.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4713) HA2 PF04408.23 ORF76223 - 0.093 13.0 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Helicase associated domain (HA2) PI3K_1B_p101 PF10486.9 ORF76223 - 0.13 10.0 2.1 0.1 10.3 2.1 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit PPP4R2 PF09184.11 ORF76223 - 0.45 10.1 10.8 0.49 9.9 10.8 1.1 1 0 0 1 1 1 0 PPP4R2 Nop14 PF04147.12 ORF76223 - 0.46 8.6 11.8 0.4 8.8 11.8 1.1 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 ORF76223 - 3.8 5.7 10.0 4.1 5.6 10.0 1.1 1 0 0 1 1 1 0 CDC45-like protein NOA36 PF06524.12 ORF76223 - 5.2 6.3 13.9 6.3 6.0 13.9 1.1 1 0 0 1 1 1 0 NOA36 protein DUF4746 PF15928.5 ORF76223 - 9.5 5.5 10.5 11 5.3 10.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) MORN PF02493.20 ORF75382 - 1.5e-17 62.4 31.1 1.6e-08 33.9 1.3 6.1 6 1 0 6 6 6 5 MORN repeat DUF4820 PF16091.5 ORF75174 - 1.2 8.4 7.1 1.6 8.0 7.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) SURF2 PF05477.11 ORF75174 - 3.8 7.1 10.3 4.3 7.0 10.3 1.1 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) SEC-C PF02810.15 ORF75128 - 0.13 12.2 1.1 0.13 12.2 1.1 2.1 2 0 0 2 2 2 0 SEC-C motif iPGM_N PF06415.13 ORF74260 - 0.14 11.6 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) DUF1489 PF07370.11 ORF73897 - 0.062 13.0 0.3 0.08 12.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1489) LEAP-2 PF07359.11 ORF73897 - 0.49 10.3 4.6 3.5 7.5 1.5 2.4 2 1 0 2 2 2 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) ACCA PF03255.14 ORF73527 - 0.0069 16.3 0.2 0.011 15.6 0.2 1.6 1 1 0 1 1 1 1 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF4239 PF14023.6 ORF73527 - 0.13 12.0 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) YvrJ PF12841.7 ORF73395 - 0.02 14.4 0.3 0.89 9.1 0.0 2.4 2 0 0 2 2 2 0 YvrJ protein family TMF_TATA_bd PF12325.8 ORF73395 - 0.023 14.9 1.3 0.032 14.5 1.3 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding YojJ PF10372.9 ORF73395 - 0.028 14.5 1.8 3.4 7.8 0.5 2.2 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus LRS4 PF10422.9 ORF73395 - 0.033 13.7 1.3 0.036 13.6 1.3 1.1 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 NCD2 PF04905.13 ORF73395 - 0.043 13.8 0.7 0.063 13.2 0.7 1.2 1 0 0 1 1 1 0 NAB conserved region 2 (NCD2) Baculo_PEP_C PF04513.12 ORF73395 - 0.046 13.7 0.3 0.067 13.2 0.3 1.2 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus BLOC1_2 PF10046.9 ORF73395 - 0.064 13.6 2.3 5.3 7.4 0.1 2.2 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 ORF73395 - 0.098 12.7 1.6 0.14 12.2 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF3375 PF11855.8 ORF73395 - 0.11 11.4 0.1 0.16 10.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3375) XhlA PF10779.9 ORF73395 - 0.28 11.4 2.9 11 6.3 1.6 2.4 1 1 1 2 2 2 0 Haemolysin XhlA Flo11 PF10182.9 ORF73352 - 0.034 14.3 0.0 0.05 13.7 0.0 1.2 1 0 0 1 1 1 0 Flo11 domain Ank_2 PF12796.7 ORF71439 - 1.2e-13 51.5 0.0 1.9e-08 34.7 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF71439 - 1.1e-09 37.7 0.1 0.0017 18.6 0.0 3.4 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF71439 - 1.9e-08 34.7 0.0 5.6e-06 26.8 0.0 2.7 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF71439 - 1.8e-07 31.3 0.5 0.025 15.0 0.1 3.4 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF71439 - 2.6e-06 27.6 0.2 6.6e-05 23.1 0.1 2.7 1 1 2 3 3 3 1 Ankyrin repeats (many copies) MCR_alpha PF02249.17 ORF70037 - 0.026 15.0 0.2 0.054 14.0 0.1 1.5 1 1 1 2 2 2 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain Peptidase_U4 PF03419.13 ORF69290 - 0.013 14.9 2.5 0.014 14.7 2.5 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA MSV199 PF10553.9 ORF69290 - 0.018 15.3 0.2 0.023 14.9 0.2 1.2 1 0 0 1 1 1 0 MSV199 domain MRAP PF15183.6 ORF69290 - 0.021 14.8 0.5 0.021 14.8 0.5 1.8 1 1 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Flu_B_M2 PF04772.12 ORF69290 - 0.022 15.0 0.8 2.4 8.4 0.1 2.1 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) SPACA7 PF15307.6 ORF69290 - 0.051 13.9 2.4 0.063 13.5 2.4 1.2 1 0 0 1 1 1 0 Sperm acrosome-associated protein 7 UPF0016 PF01169.19 ORF69290 - 0.44 10.9 7.4 0.27 11.6 5.2 1.7 2 0 0 2 2 2 0 Uncharacterized protein family UPF0016 P34-Arc PF04045.14 ORF68475 - 5.6e-16 59.0 0.4 6.3e-16 58.8 0.4 1.0 1 0 0 1 1 1 1 Arp2/3 complex, 34 kD subunit p34-Arc MORN PF02493.20 ORF68351 - 2.1e-13 49.3 21.7 1.1e-05 25.0 1.0 5.6 6 0 0 6 6 6 4 MORN repeat UDPGP PF01704.18 ORF68314 - 2.6e-11 42.8 0.1 2.7e-11 42.8 0.1 1.0 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase Cauli_AT PF03233.13 ORF68314 - 0.027 14.4 0.1 0.032 14.2 0.1 1.1 1 0 0 1 1 1 0 Aphid transmission protein BCL_N PF04714.13 ORF68314 - 0.029 14.4 0.0 0.047 13.7 0.0 1.4 1 0 0 1 1 1 0 BCL7, N-terminal conserver region SIR2 PF02146.17 ORF6825 - 0.056 13.4 0.8 0.072 13.0 0.8 1.1 1 0 0 1 1 1 0 Sir2 family Methyltransf_PK PF05891.12 ORF6825 - 0.064 12.8 0.2 0.082 12.4 0.2 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase gerPA PF10676.9 ORF68232 - 0.11 12.7 4.4 0.93 9.8 1.9 2.2 2 0 0 2 2 2 0 Spore germination protein gerPA/gerPF DUF1350 PF07082.11 ORF67192 - 0.074 12.3 0.2 0.085 12.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1350) 2-Hacid_dh PF00389.30 ORF67192 - 0.12 12.1 0.1 0.19 11.4 0.1 1.5 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Cep57_MT_bd PF06657.13 ORF67191 - 0.0081 16.6 3.1 0.0081 16.6 3.1 2.1 1 1 1 2 2 2 1 Centrosome microtubule-binding domain of Cep57 OmpH PF03938.14 ORF67191 - 3.3 8.1 12.5 6.6 7.1 12.5 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Defb50 PF17546.2 ORF67177 - 0.12 12.3 0.4 0.28 11.1 0.1 1.8 2 0 0 2 2 2 0 Beta defensin 50 Wtap PF17098.5 ORF66716 - 0.025 14.5 0.3 0.031 14.2 0.3 1.2 1 0 0 1 1 1 0 WTAP/Mum2p family DUF3740 PF12548.8 ORF66716 - 0.096 13.1 1.6 0.12 12.8 0.3 1.7 1 1 0 2 2 2 0 Sulfatase protein She9_MDM33 PF05546.11 ORF6641 - 0.021 14.6 0.2 0.03 14.1 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF6641 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF6641 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger ERGIC_N PF13850.6 ORF65716 - 0.011 16.1 0.2 0.016 15.6 0.2 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) MaoC_dehydrat_N PF13452.6 ORF6556 - 0.00054 20.1 0.0 0.00069 19.8 0.0 1.2 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase Clr5 PF14420.6 ORF65153 - 1.4 9.2 0.0 1.4 9.2 0.0 2.6 3 1 0 3 3 3 0 Clr5 domain MIG-14_Wnt-bd PF06664.12 ORF64512 - 3.7e-10 39.5 15.8 5.6e-10 38.9 15.8 1.3 1 1 0 1 1 1 1 Wnt-binding factor required for Wnt secretion Peptidase_A24 PF01478.18 ORF64512 - 0.097 13.1 4.5 0.13 12.7 3.2 1.9 1 1 0 1 1 1 0 Type IV leader peptidase family ADK PF00406.22 ORF63939 - 2.1e-16 60.4 0.1 2.5e-16 60.2 0.1 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF63939 - 2.3e-10 41.0 0.1 4.4e-10 40.1 0.0 1.5 2 0 0 2 2 2 1 AAA domain iPGM_N PF06415.13 ORF62022 - 0.14 11.6 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) HMG_box PF00505.19 ORF58504 - 1.3e-18 67.2 6.5 1.3e-18 67.2 6.5 1.9 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF58504 - 2.4e-12 47.2 4.7 2.4e-12 47.2 4.7 2.2 2 1 0 2 2 2 1 HMG-box domain YABBY PF04690.13 ORF58504 - 6 7.4 17.0 0.18 12.4 8.2 2.0 1 1 1 2 2 2 0 YABBY protein TMF_DNA_bd PF12329.8 ORF57479 - 0.076 13.0 0.6 11 6.0 0.2 2.4 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding RET_CLD1 PF17756.1 ORF57431 - 0.05 13.9 0.2 0.062 13.6 0.2 1.2 1 0 0 1 1 1 0 RET Cadherin like domain 1 SPATA24 PF15175.6 ORF56902 - 0.0035 17.3 2.6 0.0039 17.1 2.6 1.3 1 0 0 1 1 1 1 Spermatogenesis-associated protein 24 Fib_alpha PF08702.10 ORF56902 - 0.0035 17.5 6.6 0.0037 17.5 5.7 1.4 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family HMMR_N PF15905.5 ORF56902 - 0.013 15.0 4.7 0.014 14.9 4.7 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal TPD52 PF04201.15 ORF56902 - 0.024 14.2 0.4 0.03 13.9 0.4 1.2 1 0 0 1 1 1 0 Tumour protein D52 family DUF641 PF04859.12 ORF56902 - 0.039 14.3 2.6 0.068 13.5 2.6 1.5 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) CCDC74_C PF14917.6 ORF56902 - 0.043 14.3 0.3 0.049 14.2 0.3 1.3 1 0 0 1 1 1 0 Coiled coil protein 74, C terminal XLF PF09302.11 ORF56902 - 0.048 13.8 3.9 0.07 13.3 3.9 1.2 1 0 0 1 1 1 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Oberon_cc PF16312.5 ORF56902 - 0.072 13.0 4.6 0.049 13.6 3.0 1.5 2 0 0 2 2 2 0 Coiled-coil region of Oberon PKcGMP_CC PF16808.5 ORF56902 - 0.11 12.4 8.4 0.093 12.6 3.7 2.7 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Ly49 PF08391.10 ORF56902 - 1.2 9.5 7.7 1.6 9.1 7.7 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region AlphaC_C PF17480.2 ORF56902 - 1.3 9.1 5.9 2.4 8.2 1.5 3.0 1 1 2 3 3 3 0 AlphaC C-terminal TMEMspv1-c74-12 PF11044.8 ORF56646 - 0.081 12.9 1.1 7.8 6.6 0.0 2.5 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein LMBR1 PF04791.16 ORF56536 - 3.9e-16 59.1 10.6 4.1e-16 59.0 10.6 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein DUF996 PF06195.13 ORF56536 - 0.022 15.0 1.1 0.022 15.0 1.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF996) DUF1230 PF06799.11 ORF56536 - 0.11 12.6 1.8 1 9.5 0.0 2.0 2 0 0 2 2 2 0 Conserved in the green lineage and diatoms 27 SAP130_C PF16014.5 ORF54837 - 0.5 9.4 3.7 0.55 9.3 3.7 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus Toxin_16 PF07945.11 ORF5412 - 9 6.3 21.4 0.47 10.4 7.0 2.4 2 0 0 2 2 2 0 Janus-atracotoxin MaoC_dehydrat_N PF13452.6 ORF51398 - 4.3e-05 23.7 0.0 4.3e-05 23.7 0.0 1.3 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase DNA_ligase_A_M PF01068.21 ORF51317 - 9.6e-15 54.8 0.1 1e-14 54.7 0.1 1.1 1 0 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.10 ORF51317 - 0.00036 20.9 0.1 0.00046 20.5 0.1 1.2 1 0 0 1 1 1 1 RNA ligase mRNA_cap_enzyme PF01331.19 ORF51317 - 0.0086 15.9 0.1 0.01 15.7 0.1 1.2 1 0 0 1 1 1 1 mRNA capping enzyme, catalytic domain DUF2850 PF11012.8 ORF51317 - 0.027 14.8 0.6 1.2 9.5 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2850) TOBE_2 PF08402.10 ORF51228 - 1.2e-09 38.2 0.0 2.2e-09 37.4 0.0 1.5 1 0 0 1 1 1 1 TOBE domain She9_MDM33 PF05546.11 ORF50380 - 0.051 13.4 0.2 0.073 12.9 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF50380 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF50380 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger RtcB PF01139.17 ORF50319 - 0.0025 17.1 1.0 0.003 16.8 1.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Vicilin_N PF04702.12 ORF50319 - 0.2 11.5 5.7 0.26 11.1 5.7 1.2 1 0 0 1 1 1 0 Vicilin N terminal region DNA_pol3_delta PF06144.13 ORF50202 - 0.5 10.1 4.5 0.26 11.1 0.7 1.9 1 1 1 2 2 2 0 DNA polymerase III, delta subunit She9_MDM33 PF05546.11 ORF50083 - 0.028 14.2 0.2 0.04 13.7 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF50083 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF50083 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger DUF2544 PF11245.8 ORF49897 - 0.022 14.2 0.1 0.026 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2544) DUF898 PF05987.13 ORF48843 - 1.3e-06 27.8 0.1 1.5e-06 27.5 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF898) GerA PF03323.13 ORF45837 - 0.036 12.5 3.2 0.042 12.3 3.2 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein GST_N_2 PF13409.6 ORF44352 - 0.00012 22.3 0.0 0.00026 21.2 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF44352 - 0.00028 21.2 0.0 0.00084 19.7 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain Tom37 PF10568.9 ORF44352 - 0.16 12.3 0.0 0.27 11.5 0.0 1.4 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein Mesd PF10185.9 ORF44189 - 0.043 13.8 0.1 0.055 13.4 0.1 1.1 1 0 0 1 1 1 0 Chaperone for wingless signalling and trafficking of LDL receptor V-SNARE_C PF12352.8 ORF43587 - 0.028 14.7 2.2 0.081 13.2 1.3 2.3 2 1 0 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus CaM-KIIN PF15170.6 ORF43587 - 0.055 13.6 0.1 0.1 12.8 0.1 1.7 1 1 0 1 1 1 0 Calcium/calmodulin-dependent protein kinase II inhibitor Exonuc_VII_L PF02601.15 ORF43587 - 0.084 12.4 10.0 0.091 12.3 10.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit RNA_pol_3_Rpc31 PF11705.8 ORF43587 - 0.2 11.9 17.0 0.21 11.8 17.0 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DUF4407 PF14362.6 ORF43587 - 0.24 10.7 21.3 0.26 10.6 21.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Snapin_Pallidin PF14712.6 ORF43587 - 0.33 11.4 6.6 0.36 11.3 4.6 1.9 1 1 1 2 2 2 0 Snapin/Pallidin FOXP-CC PF16159.5 ORF43587 - 0.38 11.4 2.2 0.72 10.5 2.0 1.6 1 1 0 1 1 1 0 FOXP coiled-coil domain Lant_dehydr_C PF14028.6 ORF43587 - 0.67 9.4 5.8 0.69 9.4 5.8 1.1 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term Uds1 PF15456.6 ORF43587 - 1.2 9.3 15.2 0.32 11.2 7.0 2.2 1 1 1 2 2 2 0 Up-regulated During Septation FAM60A PF15396.6 ORF43587 - 1.5 8.8 6.2 1.7 8.6 6.2 1.1 1 0 0 1 1 1 0 Protein Family FAM60A NOA36 PF06524.12 ORF43587 - 1.9 7.7 12.2 2.3 7.4 12.2 1.3 1 0 0 1 1 1 0 NOA36 protein Fmp27_WPPW PF10359.9 ORF43587 - 1.9 7.2 10.0 2.1 7.1 10.0 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain PTS_IIA PF02255.16 ORF43587 - 3.1 7.9 9.2 0.77 9.8 4.5 2.2 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit DUF4746 PF15928.5 ORF43587 - 3.9 6.8 12.5 4.2 6.7 12.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Myc_N PF01056.18 ORF43587 - 5.3 6.8 13.6 10 5.9 13.6 1.4 1 1 0 1 1 1 0 Myc amino-terminal region Nop25 PF09805.9 ORF43587 - 7.1 7.1 22.2 3.8 8.0 20.5 1.4 1 1 0 1 1 1 0 Nucleolar protein 12 (25kDa) DUF3619 PF12279.8 ORF43587 - 7.9 6.8 9.5 8.1 6.8 5.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3619) TFIIA PF03153.13 ORF43587 - 8.2 6.3 17.8 10 6.0 17.8 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit iPGM_N PF06415.13 ORF43020 - 0.14 11.6 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) RhoGAP PF00620.27 ORF42036 - 3.1e-05 23.9 0.0 4.7e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 RhoGAP domain Ank_2 PF12796.7 ORF41235 - 1.9e-13 50.8 2.7 3.5e-10 40.3 0.7 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF41235 - 4.2e-12 46.3 1.9 3.2e-10 40.3 0.3 2.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF41235 - 4.4e-12 45.9 4.7 1.4e-05 25.3 0.4 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF41235 - 1.8e-10 40.8 1.9 8e-09 35.6 0.3 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF41235 - 1.1e-08 34.6 1.3 0.0081 16.6 0.1 3.1 3 1 0 3 3 3 2 Ankyrin repeat Bac_rhodopsin PF01036.18 ORF40063 - 0.066 12.8 0.0 0.084 12.4 0.0 1.1 1 0 0 1 1 1 0 Bacteriorhodopsin-like protein DnaJ PF00226.31 ORF38956 - 0.028 14.5 0.0 0.047 13.8 0.0 1.4 1 0 0 1 1 1 0 DnaJ domain Herpes_DNAp_acc PF04929.12 ORF38956 - 1.4 7.8 4.0 1.7 7.5 4.0 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Stealth_CR3 PF17102.5 ORF38956 - 9.7 6.2 7.8 2.4 8.2 0.1 3.1 4 0 0 4 4 4 0 Stealth protein CR3, conserved region 3 She9_MDM33 PF05546.11 ORF37766 - 0.049 13.4 0.2 0.069 13.0 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF37766 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF37766 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger zf-CCHC_3 PF13917.6 ORF37668 - 1.8e-13 50.2 2.8 3.3e-13 49.4 2.8 1.4 1 0 0 1 1 1 1 Zinc knuckle TFIIF_alpha PF05793.12 ORF37668 - 0.0044 15.7 11.2 0.0044 15.7 11.2 1.2 1 0 0 1 1 1 1 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) DUF755 PF05501.11 ORF37668 - 0.008 16.5 23.3 0.008 16.5 23.3 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF755) SR-25 PF10500.9 ORF37668 - 0.012 15.2 17.2 0.012 15.2 17.2 1.6 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein Pap_E4 PF02711.14 ORF37668 - 3.2 8.8 8.4 3.8 8.5 6.7 1.8 2 0 0 2 2 2 0 E4 protein Presenilin PF01080.17 ORF37668 - 6 5.5 5.3 5.9 5.6 5.3 1.1 1 0 0 1 1 1 0 Presenilin DUF4692 PF15763.5 ORF37668 - 7.4 7.0 10.6 12 6.3 10.6 1.3 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) Med19 PF10278.9 ORF37668 - 9.2 6.2 17.1 11 5.9 17.1 1.3 1 1 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Med2 PF11214.8 ORF37236 - 0.0024 18.0 0.5 0.0035 17.5 0.5 1.3 1 0 0 1 1 1 1 Mediator complex subunit 2 DUF1132 PF06575.12 ORF37236 - 0.023 15.1 0.2 0.041 14.3 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1132) Frtz PF11768.8 ORF36751 - 0.071 11.4 0.3 0.074 11.4 0.3 1.1 1 0 0 1 1 1 0 WD repeat-containing and planar cell polarity effector protein Fritz Med2 PF11214.8 ORF3274 - 0.0024 18.0 0.5 0.0035 17.5 0.5 1.3 1 0 0 1 1 1 1 Mediator complex subunit 2 DUF1132 PF06575.12 ORF3274 - 0.023 15.1 0.2 0.041 14.3 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1132) DUF2897 PF11446.8 ORF3056 - 0.037 13.9 1.8 0.037 13.9 1.8 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) BATS PF06968.13 ORF30035 - 0.14 12.3 0.6 0.32 11.2 0.3 1.5 1 1 0 2 2 2 0 Biotin and Thiamin Synthesis associated domain DUF1664 PF07889.12 ORF29731 - 0.15 12.1 0.9 0.25 11.4 0.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) RRN3 PF05327.11 ORF29731 - 0.54 8.7 7.0 0.56 8.7 7.0 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 DbpA PF03880.15 ORF27555 - 0.16 12.0 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 DbpA RNA binding domain Ntox5 PF15543.6 ORF27016 - 0.13 12.1 0.0 0.49 10.3 0.0 1.8 2 0 0 2 2 2 0 Bacterial toxin 5 Y_phosphatase3 PF13350.6 ORF26680 - 0.13 12.2 0.1 1.3 8.9 0.1 2.0 1 1 0 1 1 1 0 Tyrosine phosphatase family She9_MDM33 PF05546.11 ORF26525 - 0.047 13.5 0.2 0.064 13.1 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF26525 - 0.14 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF26525 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger peroxidase PF00141.23 ORF24614 - 2.6e-13 50.2 0.0 4.6e-13 49.4 0.0 1.4 1 1 0 1 1 1 1 Peroxidase BRCT PF00533.26 ORF24058 - 9.2e-11 42.0 0.0 1.3e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain PTCB-BRCT PF12738.7 ORF24058 - 4.5e-10 39.3 0.2 7.7e-10 38.6 0.2 1.3 1 0 0 1 1 1 1 twin BRCT domain BRCT_2 PF16589.5 ORF24058 - 0.00028 21.2 0.1 0.00034 21.0 0.1 1.3 1 1 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain C1_2 PF03107.16 ORF24058 - 0.1 12.9 5.0 0.25 11.7 5.0 1.6 1 1 0 1 1 1 0 C1 domain zf-B_box PF00643.24 ORF24058 - 0.22 11.7 7.6 0.2 11.8 5.3 2.1 2 1 0 2 2 2 0 B-box zinc finger DUF2052 PF09747.9 ORF23797 - 0.56 10.3 9.0 0.64 10.1 9.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) ACPS PF01648.20 ORF23304 - 5.5e-24 84.5 0.0 6.1e-24 84.4 0.0 1.0 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily Tecti-min-caps PF09300.10 ORF23304 - 0.089 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Tectiviridae, minor capsid FANCM-MHF_bd PF16783.5 ORF23304 - 0.1 12.7 0.0 0.47 10.5 0.0 1.9 2 0 0 2 2 2 0 FANCM to MHF binding domain YdaS_antitoxin PF15943.5 ORF23304 - 0.11 12.3 0.0 0.31 11.0 0.0 1.7 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT MAPEG PF01124.18 ORF23100 - 6e-11 42.4 0.1 7.3e-11 42.1 0.1 1.1 1 0 0 1 1 1 1 MAPEG family DUF2157 PF09925.9 ORF22662 - 0.09 12.6 0.1 0.76 9.5 0.1 1.9 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) Vpu PF00558.19 ORF22269 - 0.047 13.5 0.9 0.047 13.5 0.9 1.7 2 1 0 2 2 2 0 Vpu protein Myc_target_1 PF15179.6 ORF22269 - 0.053 13.4 0.0 0.071 13.0 0.0 1.2 1 0 0 1 1 1 0 Myc target protein 1 DUF2207 PF09972.9 ORF22269 - 0.71 8.6 3.9 0.88 8.3 3.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3290 PF11694.8 ORF22269 - 1.1 9.3 6.2 0.33 10.9 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) DUF1418 PF07214.12 ORF22269 - 1.9 8.4 7.0 2.5 8.0 2.4 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1418) Lig_chan PF00060.26 ORF22269 - 2.6 7.9 4.8 2.7 7.8 0.2 2.1 1 1 1 2 2 2 0 Ligand-gated ion channel SH PF01445.17 ORF22269 - 6.7 6.8 8.6 0.14 12.2 1.9 1.6 2 0 0 2 2 2 0 Viral small hydrophobic protein TMEM154 PF15102.6 ORF22269 - 8.7 6.2 5.8 0.69 9.8 0.3 1.8 1 1 1 2 2 2 0 TMEM154 protein family Ricin_B_lectin PF00652.22 ORF21564 - 5.9e-20 71.8 3.9 7.3e-20 71.5 3.9 1.0 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF21564 - 2.3e-11 44.3 4.4 1.5e-07 32.0 0.8 2.1 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 ORF21564 - 0.0063 16.1 0.1 0.024 14.2 0.1 1.8 1 1 1 2 2 2 1 Cytolethal distending toxin A/C domain CIDR1_gamma PF18562.1 ORF21564 - 1.2 9.3 7.1 20 5.3 0.0 3.3 3 0 0 3 3 3 0 Cysteine-Rich Interdomain Region 1 gamma Mo25 PF08569.11 ORF21485 - 1.5e-17 64.0 8.1 1.7e-17 63.8 8.1 1.0 1 0 0 1 1 1 1 Mo25-like ATP-grasp_4 PF13535.6 ORF21038 - 0.23 11.0 0.0 0.3 10.6 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain RRM_1 PF00076.22 ORF20726 - 5.6e-21 74.1 0.1 7.3e-21 73.8 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF20726 - 0.007 16.5 0.0 0.011 15.8 0.0 1.3 1 1 0 1 1 1 1 RNA recognition motif DUF4944 PF16302.5 ORF20726 - 0.016 15.3 0.0 0.021 14.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4944) RRM_3 PF08777.11 ORF20726 - 0.028 14.5 0.0 0.041 13.9 0.0 1.2 1 0 0 1 1 1 0 RNA binding motif RRM_5 PF13893.6 ORF20726 - 0.038 13.6 0.0 0.048 13.2 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ATP-synt_I PF03899.15 ORF20680 - 7.2e-15 55.2 13.9 1e-14 54.7 13.9 1.2 1 0 0 1 1 1 1 ATP synthase I chain 2TM PF13239.6 ORF20680 - 6.8 7.1 7.6 6.3 7.2 0.2 2.2 2 0 0 2 2 2 0 2TM domain MaoC_dehydrat_N PF13452.6 ORF19103 - 4.9e-05 23.5 0.0 6.7e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase IL28A PF15177.6 ORF18588 - 0.48 10.3 8.2 0.71 9.7 8.2 1.4 1 1 0 1 1 1 0 Interleukin-28A PADR1 PF08063.12 ORF18336 - 2.1e-08 33.8 0.1 3.5e-08 33.1 0.1 1.4 1 0 0 1 1 1 1 PADR1 (NUC008) domain SAP PF02037.27 ORF18336 - 0.0037 17.0 0.9 0.0056 16.4 0.1 1.7 2 0 0 2 2 2 1 SAP domain SDA1 PF05285.12 ORF18336 - 0.02 14.3 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 SDA1 GST_N_2 PF13409.6 ORF17751 - 2.1e-05 24.7 0.0 4.9e-05 23.5 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF17751 - 0.00013 22.3 0.0 0.00044 20.6 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF17751 - 0.11 12.9 0.2 0.32 11.4 0.2 1.8 1 1 0 1 1 1 0 Glutathione S-transferase, N-terminal domain PID PF00640.23 ORF16799 - 0.047 13.7 0.2 0.055 13.5 0.2 1.2 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) Ribosomal_L32p PF01783.23 ORF16799 - 0.55 10.5 7.4 0.26 11.6 4.7 1.8 2 1 0 2 2 2 0 Ribosomal L32p protein family DUF1298 PF06974.13 ORF16735 - 0.0033 17.4 0.0 0.0038 17.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Bim_N PF06773.11 ORF16553 - 0.015 15.0 2.0 0.031 13.9 1.3 1.9 2 0 0 2 2 2 0 Bim protein N-terminus ThuA PF06283.11 ORF16175 - 0.013 15.7 0.0 0.016 15.4 0.0 1.1 1 0 0 1 1 1 0 Trehalose utilisation GldM_N PF12081.8 ORF13895 - 0.0026 17.9 0.9 0.0032 17.6 0.9 1.1 1 0 0 1 1 1 1 GldM N-terminal domain She9_MDM33 PF05546.11 ORF13895 - 0.014 15.2 1.9 0.015 15.1 1.9 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family DUF1258 PF06869.12 ORF13895 - 0.1 12.1 3.3 0.11 11.9 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) RasGAP_C PF03836.15 ORF13895 - 0.11 12.7 3.9 0.12 12.5 3.5 1.3 1 1 0 1 1 1 0 RasGAP C-terminus Sigma70_r2 PF04542.14 ORF13719 - 0.041 13.7 0.0 0.093 12.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-70 region 2 RP853 PF17542.2 ORF12753 - 0.00039 19.7 2.2 0.00043 19.5 2.2 1.0 1 0 0 1 1 1 1 Uncharacterized RP853 Arm_3 PF16186.5 ORF12753 - 0.027 14.0 0.1 0.063 12.9 0.1 1.7 1 0 0 1 1 1 0 Atypical Arm repeat Glucos_trans_II PF14264.6 ORF12753 - 0.1 11.9 0.1 0.12 11.8 0.1 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII She9_MDM33 PF05546.11 ORF11912 - 0.05 13.4 0.2 0.07 12.9 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF11912 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF11912 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger DUF3450 PF11932.8 ORF11790 - 0.00076 18.9 10.4 0.00076 18.9 10.4 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) HAP1_N PF04849.13 ORF11790 - 0.0022 17.2 18.2 0.0026 17.0 18.2 1.2 1 0 0 1 1 1 1 HAP1 N-terminal conserved region Rossmann-like PF10727.9 ORF11790 - 0.0087 15.9 0.0 0.027 14.3 0.0 1.7 2 0 0 2 2 2 1 Rossmann-like domain Chibby PF14645.6 ORF11790 - 0.024 15.1 8.0 0.065 13.6 1.1 2.2 2 0 0 2 2 2 0 Chibby family Taxilin PF09728.9 ORF11790 - 0.026 13.7 19.4 0.033 13.4 19.4 1.2 1 0 0 1 1 1 0 Myosin-like coiled-coil protein Rootletin PF15035.6 ORF11790 - 0.031 14.3 15.7 0.05 13.6 15.7 1.3 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion G_path_suppress PF15991.5 ORF11790 - 0.04 14.0 15.2 0.047 13.8 15.2 1.1 1 0 0 1 1 1 0 G-protein pathway suppressor Spc29 PF17082.5 ORF11790 - 0.042 13.7 6.2 0.064 13.1 6.1 1.3 1 1 0 1 1 1 0 Spindle Pole Component 29 DUF2381 PF09544.10 ORF11790 - 0.045 13.3 2.4 0.05 13.1 1.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2381) GAS PF13851.6 ORF11790 - 0.08 12.3 19.6 0.22 10.9 19.6 1.6 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Wtap PF17098.5 ORF11790 - 0.16 11.9 13.0 0.18 11.8 12.5 1.5 1 1 0 1 1 1 0 WTAP/Mum2p family SOG2 PF10428.9 ORF11790 - 0.19 10.9 5.1 0.21 10.8 5.1 1.2 1 0 0 1 1 1 0 RAM signalling pathway protein TMF_DNA_bd PF12329.8 ORF11790 - 0.21 11.6 24.1 0.039 13.9 18.5 2.3 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding ERM PF00769.19 ORF11790 - 0.34 10.7 14.8 0.47 10.2 14.8 1.2 1 0 0 1 1 1 0 Ezrin/radixin/moesin family TSC22 PF01166.18 ORF11790 - 0.42 11.0 13.3 0.18 12.2 3.3 3.1 2 1 1 3 3 2 0 TSC-22/dip/bun family YabA PF06156.13 ORF11790 - 0.46 11.2 14.1 1 10.0 4.4 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Cnn_1N PF07989.11 ORF11790 - 0.6 10.3 15.5 0.36 11.0 12.6 2.2 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 AAA_13 PF13166.6 ORF11790 - 0.64 8.6 11.8 0.72 8.4 11.8 1.0 1 0 0 1 1 1 0 AAA domain bZIP_1 PF00170.21 ORF11790 - 1.3 9.1 16.3 3.4 7.9 7.2 2.8 1 1 1 2 2 2 0 bZIP transcription factor Myc-LZ PF02344.15 ORF11790 - 1.9 8.7 17.6 1.5 9.0 3.6 2.8 2 0 0 2 2 2 0 Myc leucine zipper domain KIAA1430 PF13879.6 ORF11790 - 1.9 9.3 12.5 2.4 9.0 12.5 1.3 1 0 0 1 1 1 0 KIAA1430 homologue FlaC_arch PF05377.11 ORF11790 - 2.9 8.3 7.5 2 8.9 0.6 2.8 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) YlqD PF11068.8 ORF11790 - 3.5 8.0 17.7 4.7 7.6 17.0 1.6 1 1 1 2 2 2 0 YlqD protein TMPIT PF07851.13 ORF11790 - 3.7 6.7 9.7 4.3 6.5 9.7 1.2 1 0 0 1 1 1 0 TMPIT-like protein bZIP_2 PF07716.15 ORF11790 - 4.2 7.5 17.2 0.51 10.5 4.1 3.1 2 1 1 3 3 3 0 Basic region leucine zipper UPF0242 PF06785.11 ORF11790 - 5 7.2 19.7 2.9 8.0 5.7 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF724 PF05266.14 ORF11790 - 6 6.6 14.6 15 5.4 14.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) CENP-H PF05837.12 ORF11790 - 6.7 7.2 16.4 4.1 7.9 3.1 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) APG6_N PF17675.1 ORF11790 - 6.8 7.2 21.9 25 5.4 22.1 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF11790 - 7.3 7.1 25.2 1.2 9.6 11.2 2.4 1 1 1 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 ORF11790 - 7.5 6.4 21.7 1 9.2 10.2 3.3 1 1 3 4 4 4 0 Septum formation initiator Mpv17_PMP22 PF04117.12 ORF11776 - 2.7e-20 72.3 5.4 2.7e-20 72.3 5.4 1.8 1 1 1 2 2 2 1 Mpv17 / PMP22 family EamA PF00892.20 ORF112395 - 2.9e-09 37.2 20.8 1.5e-08 34.9 12.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 ORF112395 - 0.00068 19.0 8.5 0.00072 18.9 8.5 1.1 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport DUF4212 PF13937.6 ORF112395 - 1.4 9.3 11.0 5.5 7.4 0.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4212) WASH-7_C PF14746.6 ORF112006 - 6.9e-36 123.6 0.8 8.1e-36 123.3 0.8 1.1 1 0 0 1 1 1 1 WASH complex subunit 7, C-terminal HCV_NS5a_C PF12941.7 ORF110782 - 0.086 12.7 0.7 0.086 12.7 0.7 1.8 1 1 1 2 2 2 0 HCV NS5a protein C-terminal region RCC1_2 PF13540.6 ORF110179 - 1.4e-30 104.4 26.5 8.3e-12 44.6 3.2 3.1 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF110179 - 0.00032 21.3 26.0 0.36 11.5 3.3 5.8 4 2 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat RTBV_P12 PF06361.11 ORF110179 - 0.038 14.4 0.0 15 6.0 0.0 2.9 1 1 2 3 3 3 0 Rice tungro bacilliform virus P12 protein Peptidase_C12 PF01088.21 ORF110007 - 2.3e-12 47.1 0.0 2.5e-12 47.0 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 DUF4023 PF13215.6 ORF108913 - 0.14 12.2 0.9 0.29 11.1 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4023) DUF2729 PF10870.8 ORF108573 - 0.065 13.1 0.5 0.13 12.2 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2729) PRMT5_C PF17286.2 ORF108472 - 0.1 12.4 2.9 0.14 12.0 2.9 1.2 1 0 0 1 1 1 0 PRMT5 oligomerisation domain BBL5 PF07289.11 ORF108361 - 0.098 11.7 0.7 0.12 11.4 0.7 1.0 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein Tyr_Deacylase PF02580.16 ORF105425 - 3.4e-09 37.4 0.0 3.9e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 D-Tyr-tRNA(Tyr) deacylase Snf7 PF03357.21 ORF105079 - 8.6e-16 58.0 10.1 9.7e-16 57.8 10.1 1.0 1 0 0 1 1 1 1 Snf7 HTH_Crp_2 PF13545.6 ORF105079 - 0.0041 17.1 0.2 0.41 10.7 0.1 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MCR_C PF04609.12 ORF105079 - 0.033 13.3 0.7 0.042 12.9 0.7 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase operon protein C BRE1 PF08647.11 ORF105079 - 0.044 13.8 8.1 1.7 8.8 0.2 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase DUF1110 PF06533.12 ORF105079 - 0.066 13.2 0.4 0.11 12.5 0.4 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1110) Val_tRNA-synt_C PF10458.9 ORF105079 - 0.12 12.7 10.3 1.1 9.6 10.3 2.2 1 1 0 1 1 1 0 Valyl tRNA synthetase tRNA binding arm FapA PF03961.13 ORF105079 - 0.13 10.8 6.2 0.14 10.7 6.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A FlxA PF14282.6 ORF105079 - 0.3 11.1 6.2 0.8 9.7 6.2 1.8 1 1 0 1 1 1 0 FlxA-like protein NAM-associated PF14303.6 ORF105079 - 0.59 10.8 9.8 0.79 10.4 9.8 1.2 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain Atg14 PF10186.9 ORF105079 - 1.1 8.3 6.0 1.3 8.0 6.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YMF19 PF02326.15 ORF104930 - 0.73 10.6 3.7 1.9 9.3 0.1 2.1 1 1 1 2 2 2 0 Plant ATP synthase F0 M16C_assoc PF08367.11 ORF102718 - 0.017 14.2 0.5 0.035 13.2 0.0 1.6 2 0 0 2 2 2 0 Peptidase M16C associated DUF5571 PF17732.1 ORF102014 - 0.099 12.1 2.4 0.11 11.9 2.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5571) Topo_Zn_Ribbon PF08272.11 ORF10102 - 0.032 13.9 0.0 0.06 13.0 0.0 1.5 1 0 0 1 1 1 0 Topoisomerase I zinc-ribbon-like SHIPPO-rpt PF07004.12 ORF100099 - 1.2e-13 51.2 16.7 2.1e-05 25.2 3.8 4.4 4 0 0 4 4 4 4 Sperm-tail PG-rich repeat ResIII PF04851.15 NODE_49795_length_373_cov_1.520710_g41903_i0reverse_frame_1 - 6.2e-09 36.1 0.8 8.6e-09 35.6 0.8 1.3 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 NODE_49795_length_373_cov_1.520710_g41903_i0reverse_frame_1 - 5.7e-06 26.2 0.0 7.3e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase TMEM174 PF15029.6 NODE_49782_length_373_cov_2.005917_g41890_i0forward_frame_1 - 0.026 14.3 0.6 0.03 14.0 0.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 174 LOH1CR12 PF10158.9 NODE_49781_length_373_cov_2.026627_g41889_i0reverse_frame_1 - 0.014 15.4 0.4 0.016 15.2 0.4 1.2 1 0 0 1 1 1 0 Tumour suppressor protein Molybdopterin_N PF18364.1 NODE_49775_length_373_cov_2.316568_g41883_i0reverse_frame_1 - 1.3e-12 47.5 0.1 3.1e-12 46.3 0.0 1.7 2 0 0 2 2 2 1 Molybdopterin oxidoreductase N-terminal domain Molybdopterin PF00384.22 NODE_49775_length_373_cov_2.316568_g41883_i0reverse_frame_1 - 2.5e-12 46.5 0.0 3.1e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Retinin_C PF04527.12 NODE_49775_length_373_cov_2.316568_g41883_i0reverse_frame_1 - 0.12 12.6 0.1 0.18 12.1 0.1 1.2 1 0 0 1 1 1 0 Drosophila Retinin like protein YceD PF02620.17 NODE_49773_length_373_cov_2.538462_g41881_i0forward_frame_1 - 0.00084 19.5 0.2 0.0017 18.4 0.2 1.5 1 0 0 1 1 1 1 Large ribosomal RNA subunit accumulation protein YceD Phage-tail_3 PF13550.6 NODE_49773_length_373_cov_2.538462_g41881_i0forward_frame_1 - 0.062 13.2 0.0 0.081 12.8 0.0 1.3 1 0 0 1 1 1 0 Putative phage tail protein DUF2688 PF10892.8 NODE_49773_length_373_cov_2.538462_g41881_i0forward_frame_1 - 0.082 12.4 0.6 0.15 11.6 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) RecT PF03837.14 NODE_49772_length_373_cov_2.544379_g41880_i0reverse_frame_1 - 0.00032 20.3 0.0 0.00033 20.2 0.0 1.1 1 0 0 1 1 1 1 RecT family DUF5538 PF17692.1 NODE_49768_length_373_cov_3.065089_g41876_i0reverse_frame_1 - 0.01 15.9 3.2 0.015 15.3 3.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5538) NUC205 PF08168.11 NODE_49766_length_373_cov_3.112426_g41874_i0reverse_frame_1 - 0.16 11.5 0.4 0.27 10.8 0.4 1.4 1 0 0 1 1 1 0 NUC205 domain DUF72 PF01904.18 NODE_49763_length_373_cov_3.926036_g41871_i0forward_frame_1 - 1.9e-29 103.4 0.1 2e-29 103.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 WzyE PF06899.11 NODE_49753_length_373_cov_50.360947_g41861_i0reverse_frame_1 - 0.1 11.5 6.7 0.11 11.4 6.7 1.1 1 0 0 1 1 1 0 WzyE protein, O-antigen assembly polymerase P53 PF00870.18 NODE_49753_length_373_cov_50.360947_g41861_i0reverse_frame_1 - 0.15 11.8 0.7 0.18 11.5 0.7 1.2 1 0 0 1 1 1 0 P53 DNA-binding domain DUF3267 PF11667.8 NODE_49752_length_373_cov_53.686391_g41860_i0forward_frame_1 - 2.4 8.5 9.2 0.4 11.0 3.9 2.0 1 1 1 2 2 2 0 Putative zincin peptidase DUF4378 PF14309.6 NODE_49748_length_373_cov_67.150888_g41856_i0reverse_frame_1 - 0.0011 19.4 1.1 0.0018 18.7 0.4 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4378) Glyco_transf_10 PF00852.19 NODE_49743_length_373_cov_72.985207_g41851_i0reverse_frame_1 - 0.0038 17.0 0.0 0.0046 16.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 10 (fucosyltransferase) C-term DUF5404 PF17397.2 NODE_49739_length_373_cov_76.837278_g41847_i0reverse_frame_1 - 0.13 12.4 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5404) Aldedh PF00171.22 NODE_49732_length_373_cov_89.857988_g41840_i0forward_frame_1 - 4.1e-22 78.3 0.0 5e-22 78.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF2933 PF11666.8 NODE_49731_length_373_cov_90.772189_g41839_i0forward_frame_1 - 0.0068 16.4 1.2 0.0068 16.4 1.2 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2933) bZIP_1 PF00170.21 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.00022 21.2 10.3 0.059 13.5 5.3 2.4 1 1 1 2 2 2 2 bZIP transcription factor DUF3450 PF11932.8 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.00034 20.0 0.5 0.00034 20.0 0.5 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3450) Seryl_tRNA_N PF02403.22 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.0005 20.3 4.1 0.0005 20.3 4.1 1.8 2 0 0 2 2 2 1 Seryl-tRNA synthetase N-terminal domain She9_MDM33 PF05546.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.0011 18.9 2.1 0.0014 18.4 2.1 1.3 1 0 0 1 1 1 1 She9 / Mdm33 family DUF641 PF04859.12 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.0012 19.2 3.7 0.002 18.4 3.7 1.3 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) BRE1 PF08647.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.0025 17.9 7.2 0.0025 17.9 7.2 1.4 2 0 0 2 2 2 1 BRE1 E3 ubiquitin ligase Spc42p PF11544.8 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.028 14.4 1.6 0.028 14.4 1.6 2.4 1 1 0 2 2 2 0 Spindle pole body component Spc42p TMPIT PF07851.13 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.034 13.4 5.1 0.045 13.0 5.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4200 PF13863.6 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.04 14.3 4.8 0.052 13.9 4.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Cluap1 PF10234.9 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.046 13.1 4.7 0.055 12.9 4.7 1.1 1 0 0 1 1 1 0 Clusterin-associated protein-1 DUF1664 PF07889.12 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.061 13.4 1.9 0.081 13.0 1.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.063 13.7 5.6 4.9 7.6 0.1 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF4164 PF13747.6 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.069 13.4 0.1 0.11 12.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Herpes_UL6 PF01763.16 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.13 10.8 5.9 0.14 10.6 5.9 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Fungal_TACC PF12709.7 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.18 12.2 10.0 1.2 9.6 0.5 2.4 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins ATG16 PF08614.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.28 11.4 7.9 0.042 14.1 3.9 1.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF1640 PF07798.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.3 11.1 6.6 0.57 10.2 6.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) DUF948 PF06103.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.35 11.1 3.3 1.5 9.1 3.3 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) KxDL PF10241.9 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.58 10.5 7.3 0.3 11.4 2.4 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein HIP1_clath_bdg PF16515.5 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 4.1 8.1 9.6 6.4 7.5 8.7 1.8 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TMF_DNA_bd PF12329.8 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 9.1 6.4 16.5 1.5 8.8 3.6 2.7 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding RCC1_2 PF13540.6 NODE_49723_length_373_cov_114.292899_g41831_i0forward_frame_1 - 1.8e-05 24.4 0.6 0.13 12.1 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_49723_length_373_cov_114.292899_g41831_i0forward_frame_1 - 0.19 11.8 0.0 18 5.4 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Mfa1 PF17445.2 NODE_49721_length_373_cov_131.230769_g41829_i0reverse_frame_1 - 1.4 9.0 4.4 0.55 10.3 0.8 2.1 1 1 1 2 2 2 0 Mating factor A1 Spc7 PF08317.11 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 0.15 10.9 12.1 0.17 10.8 12.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Tweety PF04906.13 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 0.32 9.6 1.8 0.52 8.9 0.9 1.6 1 1 0 1 1 1 0 Tweety TMF_TATA_bd PF12325.8 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 1.5 9.0 13.4 11 6.2 9.0 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding ALMT PF11744.8 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 2.4 6.9 6.9 0.63 8.8 2.8 1.6 1 1 1 2 2 2 0 Aluminium activated malate transporter COG2 PF06148.11 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 5.3 7.1 8.8 2.5 8.2 5.2 1.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Porin_1 PF00267.21 NODE_49709_length_374_cov_1.486726_g41818_i0forward_frame_1 - 1.4e-48 166.1 7.2 1.5e-48 166.0 7.2 1.0 1 0 0 1 1 1 1 Gram-negative porin DUF4562 PF15123.6 NODE_49709_length_374_cov_1.486726_g41818_i0forward_frame_1 - 0.00023 21.1 0.0 0.00028 20.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4562) U62_UL91 PF17442.2 NODE_49702_length_374_cov_2.132743_g41811_i0forward_frame_1 - 0.047 13.7 0.5 0.086 12.8 0.5 1.6 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins MIEAP PF16026.5 NODE_49702_length_374_cov_2.132743_g41811_i0forward_frame_1 - 0.067 13.4 0.2 0.08 13.2 0.2 1.1 1 0 0 1 1 1 0 Mitochondria-eating protein LMBR1 PF04791.16 NODE_49700_length_374_cov_2.221239_g41809_i0forward_frame_1 - 3.4e-21 75.7 10.8 3.7e-21 75.6 10.8 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein Herpes_LMP1 PF05297.11 NODE_49700_length_374_cov_2.221239_g41809_i0forward_frame_1 - 0.39 9.9 2.9 0.41 9.8 2.9 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) LysR_substrate PF03466.20 NODE_49697_length_374_cov_2.327434_g41806_i0reverse_frame_1 - 1.8e-19 70.0 0.0 2.1e-19 69.8 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain TPR_1 PF00515.28 NODE_49683_length_374_cov_4.823009_g41792_i0reverse_frame_1 - 0.0016 18.1 1.6 0.0026 17.5 1.6 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_49683_length_374_cov_4.823009_g41792_i0reverse_frame_1 - 0.012 15.7 1.1 0.02 15.0 1.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4512 PF14975.6 NODE_49669_length_374_cov_59.542773_g41778_i0reverse_frame_1 - 3.5 8.5 6.3 8.2 7.3 6.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4512) DAGK_prokar PF01219.19 NODE_49667_length_374_cov_69.150442_g41776_i0forward_frame_1 - 0.044 13.6 0.2 0.12 12.2 0.2 1.7 1 1 0 1 1 1 0 Prokaryotic diacylglycerol kinase WCCH PF03716.14 NODE_49666_length_374_cov_70.076696_g41775_i0reverse_frame_1 - 0.077 12.7 2.5 0.15 11.7 2.5 1.5 1 0 0 1 1 1 0 WCCH motif # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks184.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks184.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks184.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks184.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:00:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pullulanase_Ins PF18494.1 NODE_49623_length_375_cov_1.829412_g41732_i0reverse_frame_1 - 0.026 15.0 0.1 0.042 14.3 0.1 1.5 1 1 0 1 1 1 0 Pullulanase Ins domain GPR_Gpa2_C PF11970.8 NODE_49623_length_375_cov_1.829412_g41732_i0forward_frame_1 - 0.052 13.6 0.3 0.084 13.0 0.3 1.4 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term Zn_Tnp_IS91 PF14319.6 NODE_49617_length_375_cov_2.058824_g41726_i0reverse_frame_1 - 0.023 14.7 1.3 0.028 14.5 1.0 1.4 1 1 0 1 1 1 0 Transposase zinc-binding domain Defensin_2 PF01097.18 NODE_49617_length_375_cov_2.058824_g41726_i0reverse_frame_1 - 1.1 9.3 8.8 1.7 8.6 0.9 3.3 3 0 0 3 3 3 0 Arthropod defensin FA PF08736.11 NODE_49616_length_375_cov_2.061765_g41725_i0reverse_frame_1 - 0.13 12.3 2.0 0.19 11.8 0.4 2.0 2 0 0 2 2 2 0 FERM adjacent (FA) Big_1 PF02369.16 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 2e-20 72.6 14.5 4.4e-17 61.8 5.6 2.5 3 0 0 3 3 3 2 Bacterial Ig-like domain (group 1) Invasin_D3 PF09134.10 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 1.3e-13 51.1 11.8 6.9e-12 45.5 5.7 2.0 2 0 0 2 2 2 2 Invasin, domain 3 Big_3_5 PF16640.5 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 5.9e-06 26.4 2.3 5.9e-06 26.4 2.3 2.4 1 1 1 2 2 2 1 Bacterial Ig-like domain (group 3) Glyco_hydro2_C5 PF18565.1 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.0011 18.8 2.8 0.0067 16.2 1.2 2.6 2 1 0 2 2 2 1 Glycoside hydrolase family 2 C-terminal domain 5 DUF1573 PF07610.11 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.0022 18.0 0.3 0.0031 17.5 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1573) DUF824 PF05688.11 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.0026 17.6 1.3 0.0056 16.5 1.3 1.6 1 0 0 1 1 1 1 Salmonella repeat of unknown function (DUF824) ZirS_C PF16583.5 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.0034 16.9 0.8 0.0059 16.2 0.7 1.4 1 1 0 1 1 1 1 Zinc-regulated secreted antivirulence protein C-terminal domain MG4 PF17789.1 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.014 15.5 2.8 0.43 10.8 0.2 2.3 2 1 0 2 2 2 0 Macroglobulin domain MG4 Ashwin PF15323.6 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.02 14.9 0.2 0.024 14.7 0.2 1.1 1 0 0 1 1 1 0 Developmental protein CBM_X2 PF03442.14 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.24 11.6 6.1 0.92 9.7 0.8 2.9 1 1 1 2 2 2 0 Carbohydrate binding domain X2 His_Phos_2 PF00328.22 NODE_49608_length_375_cov_2.694118_g41717_i0forward_frame_1 - 0.016 14.5 0.0 0.019 14.3 0.0 1.0 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) Nas2_N PF18265.1 NODE_49603_length_375_cov_3.685294_g41712_i0forward_frame_1 - 0.093 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Nas2 N_terminal domain tRNA-synt_2c PF01411.19 NODE_49602_length_375_cov_3.808824_g41711_i0reverse_frame_1 - 2.1e-06 26.6 0.0 2.7e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) PEN-2 PF10251.9 NODE_49602_length_375_cov_3.808824_g41711_i0forward_frame_1 - 0.044 14.2 0.4 0.084 13.3 0.1 1.6 1 1 1 2 2 2 0 Presenilin enhancer-2 subunit of gamma secretase Lamprin PF06403.11 NODE_49599_length_375_cov_9.941176_g41708_i0forward_frame_1 - 7.8 6.5 11.5 2.2 8.2 6.1 1.9 1 1 1 2 2 2 0 Lamprin PXT1 PF15214.6 NODE_49598_length_375_cov_24.111765_g41707_i0forward_frame_1 - 0.043 14.2 0.3 0.088 13.2 0.3 1.7 1 0 0 1 1 1 0 Peroxisomal testis-specific protein 1 RNF111_N PF15303.6 NODE_49581_length_375_cov_81.017647_g41690_i0forward_frame_1 - 1 9.1 5.5 1.1 9.0 4.3 1.6 1 1 0 1 1 1 0 E3 ubiquitin-protein ligase Arkadia N-terminus Ribosomal_L26 PF16906.5 NODE_49577_length_375_cov_99.505882_g41686_i0forward_frame_1 - 5.3e-17 62.1 0.6 8.1e-17 61.5 0.6 1.3 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 NODE_49577_length_375_cov_99.505882_g41686_i0forward_frame_1 - 5.1e-08 32.6 2.0 1.5e-07 31.2 2.0 1.8 1 0 0 1 1 1 1 KOW motif ubiquitin PF00240.23 NODE_49575_length_375_cov_100.861765_g41684_i0reverse_frame_1 - 0.025 14.3 0.0 0.044 13.5 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family AbrB-like PF14250.6 NODE_49575_length_375_cov_100.861765_g41684_i0reverse_frame_1 - 0.076 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 AbrB-like transcriptional regulator RCC1_2 PF13540.6 NODE_49575_length_375_cov_100.861765_g41684_i0reverse_frame_1 - 0.08 12.8 3.8 0.63 9.9 1.2 2.5 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Rho_RNA_bind PF07497.12 NODE_49575_length_375_cov_100.861765_g41684_i0reverse_frame_1 - 0.13 12.1 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain ALG3 PF05208.13 NODE_49556_length_376_cov_1.545455_g41665_i0forward_frame_2 - 1.3e-19 70.9 6.2 1.4e-19 70.8 6.2 1.0 1 0 0 1 1 1 1 ALG3 protein Neurokinin_B PF03823.14 NODE_49553_length_376_cov_1.724340_g41662_i0reverse_frame_2 - 0.061 13.4 0.1 0.68 10.0 0.0 2.2 1 1 1 2 2 2 0 Neurokinin B DUF1415 PF07209.12 NODE_49552_length_376_cov_1.850440_g41661_i0reverse_frame_3 - 0.019 14.7 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1415) DUF4474 PF14751.6 NODE_49552_length_376_cov_1.850440_g41661_i0forward_frame_3 - 0.1 12.0 1.7 0.12 11.8 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4474) Urotensin_II PF02083.15 NODE_49544_length_376_cov_2.258065_g41653_i0reverse_frame_3 - 8.4 6.3 12.2 1.7 8.5 1.2 2.7 2 0 0 2 2 2 0 Urotensin II adh_short_C2 PF13561.6 NODE_49542_length_376_cov_2.653959_g41651_i0forward_frame_3 - 4.9e-24 85.2 0.0 5.2e-24 85.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 NODE_49542_length_376_cov_2.653959_g41651_i0forward_frame_3 - 2.5e-21 76.0 0.0 3.3e-21 75.6 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase DUF2625 PF10946.8 NODE_49541_length_376_cov_2.706745_g41650_i0reverse_frame_2 - 0.063 12.3 0.3 0.07 12.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF2625 PMSR PF01625.21 NODE_49539_length_376_cov_2.885630_g41648_i0forward_frame_3 - 1.5e-13 51.2 0.5 2.8e-13 50.3 0.4 1.5 2 0 0 2 2 2 1 Peptide methionine sulfoxide reductase DUF641 PF04859.12 NODE_49538_length_376_cov_2.894428_g41647_i0reverse_frame_3 - 0.012 15.9 0.5 0.016 15.6 0.5 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) GAS PF13851.6 NODE_49538_length_376_cov_2.894428_g41647_i0reverse_frame_3 - 0.013 14.9 0.9 0.016 14.5 0.9 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Bap31_Bap29_C PF18035.1 NODE_49538_length_376_cov_2.894428_g41647_i0reverse_frame_3 - 0.026 14.5 1.0 0.026 14.5 1.0 1.5 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain Csm1_N PF18504.1 NODE_49538_length_376_cov_2.894428_g41647_i0reverse_frame_3 - 0.072 13.4 1.7 0.11 12.8 0.8 1.7 1 1 1 2 2 2 0 Csm1 N-terminal domain CDC50 PF03381.15 NODE_49534_length_376_cov_3.489736_g41643_i0forward_frame_2 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF1694 PF07997.11 NODE_49532_length_376_cov_3.753666_g41641_i0reverse_frame_2 - 0.35 11.0 3.9 1.1 9.3 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1694) PHO4 PF01384.20 NODE_49526_length_376_cov_36.299120_g41635_i0reverse_frame_3 - 3.3 6.7 7.2 3.5 6.6 7.2 1.1 1 0 0 1 1 1 0 Phosphate transporter family DUF5553 PF17707.1 NODE_49525_length_376_cov_40.630499_g41634_i0reverse_frame_3 - 0.024 14.1 0.3 0.044 13.2 0.2 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5553) CEBP_ZZ PF16366.5 NODE_49525_length_376_cov_40.630499_g41634_i0forward_frame_3 - 0.093 13.0 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Cytomega_UL84 PF06284.11 NODE_49518_length_376_cov_66.090909_g41627_i0forward_frame_2 - 0.014 13.9 0.3 0.018 13.5 0.3 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Actin PF00022.19 NODE_49515_length_376_cov_70.950147_g41624_i0forward_frame_3 - 0.00019 20.2 0.0 0.00044 19.0 0.0 1.6 1 1 0 1 1 1 1 Actin 2OG-FeII_Oxy_3 PF13640.6 NODE_49512_length_376_cov_78.938416_g41621_i0forward_frame_2 - 9.2e-05 23.3 0.0 0.00011 23.0 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF1599 PF07659.11 NODE_49507_length_376_cov_88.222874_g41616_i0reverse_frame_3 - 0.026 14.9 0.4 0.54 10.7 0.2 2.3 2 1 0 2 2 2 0 Nucleotide modification associated domain 1 ThiC-associated PF13667.6 NODE_49503_length_376_cov_95.976540_g41612_i0reverse_frame_2 - 0.13 12.1 0.0 14 5.6 0.0 2.2 2 0 0 2 2 2 0 ThiC-associated domain PDZ PF00595.24 NODE_49499_length_376_cov_136.950147_g41608_i0reverse_frame_2 - 0.055 13.8 0.0 0.091 13.1 0.0 1.3 1 0 0 1 1 1 0 PDZ domain PDZ_6 PF17820.1 NODE_49499_length_376_cov_136.950147_g41608_i0reverse_frame_2 - 0.11 12.4 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 PDZ domain Endomucin PF07010.12 NODE_49499_length_376_cov_136.950147_g41608_i0forward_frame_3 - 0.11 12.4 0.1 0.14 12.1 0.1 1.1 1 0 0 1 1 1 0 Endomucin DUF92 PF01940.16 NODE_49495_length_376_cov_196.434018_g41604_i0forward_frame_2 - 0.17 11.2 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein DUF92 Pep1_7 PF17232.2 NODE_49494_length_376_cov_206.413490_g41603_i0forward_frame_3 - 0.059 13.8 0.1 0.059 13.8 0.1 1.4 2 0 0 2 2 2 0 Elicitor peptide 1-7 zf-NADH-PPase PF09297.11 NODE_49493_length_376_cov_426.832845_g41602_i0forward_frame_2 - 0.013 15.1 2.7 0.013 15.1 0.2 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain EF-hand_1 PF00036.32 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_3 - 7.3e-06 25.2 0.1 1.5e-05 24.2 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_3 - 0.0006 19.5 0.0 0.0035 17.2 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_3 - 0.0006 19.2 2.1 0.001 18.5 0.2 2.2 2 1 1 3 3 3 1 EF hand EF-hand_7 PF13499.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_3 - 0.0034 17.8 0.0 0.0063 16.9 0.0 1.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_2 - 0.0019 17.6 0.2 0.003 17.0 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_2 - 0.0086 15.9 0.1 0.018 14.9 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_2 - 0.044 14.2 0.0 0.059 13.8 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair OAD_beta PF03977.13 NODE_49489_length_377_cov_1.181287_g41599_i0reverse_frame_2 - 0.17 10.8 11.3 0.19 10.7 11.3 1.1 1 0 0 1 1 1 0 Na+-transporting oxaloacetate decarboxylase beta subunit DUF1902 PF08972.11 NODE_49488_length_377_cov_1.388889_g41598_i0reverse_frame_3 - 0.057 13.4 0.4 5.1 7.1 0.0 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF1902) CCDC154 PF15450.6 NODE_49487_length_377_cov_1.394737_g41597_i0reverse_frame_2 - 0.003 16.2 1.2 0.0032 16.1 1.2 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 154 FlgN PF05130.12 NODE_49487_length_377_cov_1.394737_g41597_i0reverse_frame_2 - 0.004 17.7 1.7 0.016 15.7 0.9 1.9 2 0 0 2 2 2 1 FlgN protein Lamprin PF06403.11 NODE_49482_length_377_cov_1.766082_g41592_i0reverse_frame_3 - 5.1 7.1 6.9 16 5.5 6.9 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_49482_length_377_cov_1.766082_g41592_i0forward_frame_3 - 0.0011 18.9 5.8 0.0015 18.5 5.8 1.3 1 0 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_49482_length_377_cov_1.766082_g41592_i0forward_frame_2 - 0.025 14.5 9.3 0.035 14.1 8.5 1.6 1 1 1 2 2 2 0 Lamprin Peptidase_M35 PF02102.15 NODE_49481_length_377_cov_1.766082_g41591_i0reverse_frame_2 - 0.2 10.5 0.4 0.25 10.2 0.4 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family DUF2585 PF10755.9 NODE_49480_length_377_cov_1.766082_g41590_i0forward_frame_3 - 0.048 13.4 0.3 0.062 13.0 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2585) zf-MYST PF17772.1 NODE_49478_length_377_cov_1.859649_g41588_i0forward_frame_3 - 0.0083 15.7 2.1 0.023 14.3 2.1 1.9 1 1 0 1 1 1 1 MYST family zinc finger domain DUF5456 PF17539.2 NODE_49475_length_377_cov_1.979532_g41585_i0reverse_frame_2 - 0.088 12.7 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5456) PTS_EIIB PF00367.20 NODE_49471_length_377_cov_2.245614_g41581_i0reverse_frame_2 - 2.9e-17 61.8 0.5 2.9e-17 61.8 0.5 2.0 3 0 0 3 3 3 1 phosphotransferase system, EIIB ELMO_CED12 PF04727.13 NODE_49469_length_377_cov_2.388889_g41579_i0reverse_frame_2 - 3 7.9 6.3 88 3.1 6.3 2.2 1 1 0 1 1 1 0 ELMO/CED-12 family ABC_tran_CTD PF16326.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 2.3e-05 24.5 0.6 2.3e-05 24.5 0.6 2.8 1 1 0 2 2 2 1 ABC transporter C-terminal domain HSCB_C PF07743.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.00018 21.9 10.0 0.00056 20.3 3.9 3.0 1 1 1 2 2 2 1 HSCB C-terminal oligomerisation domain DUF4795 PF16043.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.00032 20.4 12.7 0.0014 18.3 12.6 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4795) SEN1_N PF12726.7 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.00042 18.7 0.5 0.00049 18.5 0.5 1.1 1 0 0 1 1 1 1 SEN1 N terminal DUF2397 PF09660.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.00047 19.2 3.3 0.00057 18.9 3.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2397) ApoLp-III PF07464.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0015 18.6 3.9 0.3 11.2 1.0 2.1 1 1 1 2 2 2 2 Apolipophorin-III precursor (apoLp-III) DUF1664 PF07889.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0038 17.3 5.9 0.3 11.1 1.5 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) IL11 PF07400.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0042 16.7 4.2 0.034 13.8 0.9 2.5 1 1 2 3 3 3 1 Interleukin 11 baeRF_family5 PF18846.1 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0054 16.9 1.6 0.0083 16.3 1.5 1.3 1 1 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 5 COG5 PF10392.9 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0085 16.3 2.9 0.18 11.9 0.1 2.1 1 1 1 2 2 2 1 Golgi transport complex subunit 5 Cauli_AT PF03233.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0086 16.0 9.6 0.12 12.3 2.2 2.1 1 1 1 2 2 2 2 Aphid transmission protein HSBP1 PF06825.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.01 15.7 6.1 0.7 9.8 0.2 4.2 4 1 0 4 4 4 0 Heat shock factor binding protein 1 PCRF PF03462.18 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.017 15.0 4.4 0.025 14.5 4.4 1.3 1 0 0 1 1 1 0 PCRF domain ADIP PF11559.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.024 14.7 10.9 0.54 10.3 3.0 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding TACC_C PF05010.14 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.024 14.4 6.2 0.031 14.1 6.2 1.2 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal LXG PF04740.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.025 14.3 8.1 0.045 13.4 1.0 2.7 1 1 2 3 3 3 0 LXG domain of WXG superfamily TolA_bind_tri PF16331.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.025 14.6 3.1 0.025 14.6 3.1 2.9 1 1 1 2 2 2 0 TolA binding protein trimerisation Spectrin PF00435.21 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.026 15.0 8.3 0.088 13.3 1.5 2.2 1 1 0 2 2 2 0 Spectrin repeat DUF3086 PF11285.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.026 13.6 2.1 0.043 12.9 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) KxDL PF10241.9 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.031 14.5 8.9 0.075 13.3 1.8 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein Spc7 PF08317.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.036 13.0 9.5 0.045 12.6 9.5 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Fib_alpha PF08702.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.036 14.2 7.9 0.054 13.7 5.8 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF2630 PF10944.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.04 14.4 7.9 2.6 8.6 1.4 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2630) Mer2 PF09074.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.043 13.6 9.3 0.055 13.3 9.3 1.1 1 0 0 1 1 1 0 Mer2 COG2 PF06148.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.044 13.9 2.4 0.054 13.6 0.4 2.0 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 AAA_32 PF13654.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.05 12.4 3.8 0.059 12.2 3.8 1.2 1 0 0 1 1 1 0 AAA domain YlqD PF11068.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.054 13.9 9.9 0.045 14.1 4.2 2.0 1 1 1 2 2 2 0 YlqD protein FlaC_arch PF05377.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.064 13.7 4.9 3.3 8.2 0.9 3.0 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF4404 PF14357.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.066 13.9 11.3 0.8 10.4 1.3 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4404) Allexi_40kDa PF05549.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.071 12.6 1.7 0.1 12.1 1.7 1.3 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF4164 PF13747.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.08 13.2 9.2 0.31 11.4 4.5 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) EzrA PF06160.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.086 11.0 10.3 0.32 9.1 10.3 1.8 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA Baculo_PEP_C PF04513.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.088 12.8 9.2 4.9 7.2 9.2 2.6 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus ACP_PD PF04336.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.092 13.2 1.1 1.8 9.0 0.1 2.2 1 1 1 2 2 2 0 Acyl carrier protein phosphodiesterase LPP PF04728.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.094 13.1 1.0 0.094 13.1 1.0 3.1 2 1 1 3 3 3 0 Lipoprotein leucine-zipper F_actin_bind PF08919.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.11 12.7 3.7 5.1 7.2 0.3 2.6 1 1 2 3 3 3 0 F-actin binding AAA_13 PF13166.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.12 11.0 6.7 0.17 10.5 6.7 1.2 1 0 0 1 1 1 0 AAA domain T3SS_needle_F PF09392.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.14 12.4 9.4 2.9 8.2 1.1 2.9 2 1 1 3 3 3 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF Nbl1_Borealin_N PF10444.9 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.16 11.6 3.9 1.7 8.4 0.2 3.5 4 0 0 4 4 4 0 Nbl1 / Borealin N terminal Tho2 PF11262.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.17 11.1 5.6 0.69 9.1 5.6 1.8 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 TerB_N PF13208.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.17 11.6 1.5 0.2 11.3 1.5 1.0 1 0 0 1 1 1 0 TerB N-terminal domain HalX PF08663.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.17 12.2 8.1 13 6.1 0.1 3.2 2 2 1 3 3 3 0 HalX domain Baculo_F PF12259.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.18 10.3 1.9 0.23 9.9 1.9 1.3 1 1 0 1 1 1 0 Baculovirus F protein Exonuc_VII_L PF02601.15 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.21 11.1 6.2 0.22 11.1 6.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4061 PF13270.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.23 11.8 5.1 0.091 13.1 1.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4061) PilJ PF13675.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.24 11.5 2.5 0.92 9.6 0.5 2.0 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term AI-2E_transport PF01594.16 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.28 10.3 0.2 0.57 9.3 0.2 1.7 1 1 0 1 1 1 0 AI-2E family transporter V-SNARE PF05008.15 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.28 11.6 10.6 3.1 8.2 1.4 3.2 1 1 2 3 3 3 0 Vesicle transport v-SNARE protein N-terminus NPV_P10 PF05531.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.3 11.6 8.9 1.1 9.8 4.5 2.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Med9 PF07544.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.31 11.2 9.3 22 5.2 7.5 3.2 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Goodbye PF17109.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.31 11.5 3.4 2.2 8.7 0.2 2.2 1 1 1 2 2 2 0 fungal STAND N-terminal Goodbye domain Phage_Mu_Gam PF07352.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.35 10.8 8.9 0.14 12.1 2.4 2.3 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein GrpE PF01025.19 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.38 10.4 10.6 0.65 9.6 10.6 1.4 1 1 0 1 1 1 0 GrpE FliT PF05400.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.45 11.4 6.7 1 10.2 1.1 2.2 1 1 1 2 2 2 0 Flagellar protein FliT NBD94 PF16830.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.5 10.8 9.9 0.38 11.2 2.2 2.5 1 1 0 2 2 2 0 Nucleotide-Binding Domain 94 of RH CorA PF01544.18 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.51 9.6 6.4 0.66 9.2 6.4 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein YtxH PF12732.7 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.55 10.8 4.8 16 6.1 4.8 2.5 1 1 0 1 1 1 0 YtxH-like protein Hpt PF01627.23 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.57 10.5 5.0 12 6.2 0.1 3.0 2 1 1 3 3 3 0 Hpt domain ZapB PF06005.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.9 10.0 12.8 49 4.5 12.8 2.6 1 1 0 1 1 1 0 Cell division protein ZapB DUF684 PF05075.14 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.95 8.4 6.0 0.16 10.9 0.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF684) DUF4140 PF13600.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1 9.9 8.1 2.7 8.5 0.4 2.6 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) SlyX PF04102.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.2 9.8 9.8 2 9.1 2.8 3.3 1 1 1 2 2 2 0 SlyX DUF16 PF01519.16 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.3 9.5 9.9 5.2 7.6 4.8 2.4 1 1 1 2 2 2 0 Protein of unknown function DUF16 ACCA PF03255.14 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.4 8.8 6.0 1.1 9.1 1.8 2.1 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Laminin_II PF06009.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.7 8.7 7.7 2 8.4 4.8 2.2 1 1 1 2 2 2 0 Laminin Domain II BST2 PF16716.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.7 9.3 13.5 0.65 10.6 1.2 3.0 1 1 1 3 3 3 0 Bone marrow stromal antigen 2 DHR10 PF18595.1 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.8 8.6 11.2 4.6 7.3 9.4 2.5 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Atg14 PF10186.9 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.9 7.5 8.3 11 4.9 8.3 1.9 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Occludin_ELL PF07303.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.9 9.3 6.5 7.8 7.3 5.1 2.2 1 1 1 2 2 2 0 Occludin homology domain FUSC-like PF12805.7 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 2.4 7.1 4.6 7 5.6 0.4 2.1 1 1 1 2 2 2 0 FUSC-like inner membrane protein yccS TMPIT PF07851.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 2.5 7.3 5.6 13 4.9 5.6 1.9 1 1 0 1 1 1 0 TMPIT-like protein SICA_alpha PF12887.7 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 2.5 7.9 6.0 1.5 8.7 2.4 2.1 1 1 1 2 2 2 0 SICA extracellular alpha domain Tup_N PF08581.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 3 8.2 8.3 0.38 11.1 0.6 2.6 2 1 1 3 3 3 0 Tup N-terminal FapA PF03961.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 5 5.6 7.3 8.7 4.8 7.3 1.5 1 1 0 1 1 1 0 Flagellar Assembly Protein A Csm1_N PF18504.1 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 5.2 7.5 10.6 0.8 10.1 2.2 2.6 1 1 2 3 3 3 0 Csm1 N-terminal domain OmpH PF03938.14 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 5.5 7.3 13.4 3.6 7.9 5.7 2.0 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) FlxA PF14282.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 6.8 6.8 14.6 11 6.1 1.7 2.5 1 1 1 2 2 2 0 FlxA-like protein DNA_pol3_finger PF17657.1 NODE_49467_length_377_cov_2.418129_g41577_i0reverse_frame_2 - 0.098 12.0 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial DNA polymerase III alpha subunit finger domain CARMIL_C PF16000.5 NODE_49467_length_377_cov_2.418129_g41577_i0forward_frame_3 - 0.066 12.8 1.5 0.077 12.6 1.5 1.1 1 0 0 1 1 1 0 CARMIL C-terminus Aminotran_3 PF00202.21 NODE_49467_length_377_cov_2.418129_g41577_i0forward_frame_2 - 1.4e-21 76.7 0.1 1.5e-21 76.5 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III UPF0020 PF01170.18 NODE_49467_length_377_cov_2.418129_g41577_i0forward_frame_2 - 0.17 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 GAPES1 PF17155.4 NODE_49462_length_377_cov_2.877193_g41572_i0forward_frame_2 - 1.5e-40 139.3 0.6 1.8e-40 139.0 0.6 1.1 1 0 0 1 1 1 1 Gammaproteobacterial periplasmic sensor domain AbiTii PF18864.1 NODE_49459_length_377_cov_3.236842_g41569_i0reverse_frame_2 - 0.0059 16.8 0.1 0.008 16.3 0.1 1.2 1 0 0 1 1 1 1 AbiTii Prokineticin PF06607.11 NODE_49441_length_377_cov_80.713450_g41551_i0forward_frame_2 - 0.0031 17.8 0.2 0.89 9.9 0.0 2.1 1 1 0 2 2 2 2 Prokineticin SPOB_a PF14689.6 NODE_49438_length_377_cov_89.470760_g41548_i0reverse_frame_2 - 0.17 11.6 0.4 0.27 11.0 0.4 1.2 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain DUF2070 PF09843.9 NODE_49438_length_377_cov_89.470760_g41548_i0reverse_frame_2 - 2.3 6.4 7.5 2.1 6.5 7.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Ribosomal_L2_C PF03947.18 NODE_49438_length_377_cov_89.470760_g41548_i0forward_frame_3 - 0.082 13.1 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Ribosomal Proteins L2, C-terminal domain DUF4820 PF16091.5 NODE_49438_length_377_cov_89.470760_g41548_i0forward_frame_2 - 0.03 13.7 3.7 0.036 13.4 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) PAXIP1_C PF15364.6 NODE_49437_length_377_cov_91.274854_g41547_i0forward_frame_3 - 0.0069 16.7 4.1 0.0084 16.4 4.1 1.2 1 0 0 1 1 1 1 PAXIP1-associated-protein-1 C term PTIP binding protein UPF0086 PF01868.16 NODE_49437_length_377_cov_91.274854_g41547_i0forward_frame_3 - 0.0099 15.8 0.1 0.013 15.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Glucokinase PF02685.16 NODE_49436_length_377_cov_93.625731_g41546_i0forward_frame_3 - 0.089 11.8 0.1 0.12 11.4 0.1 1.0 1 0 0 1 1 1 0 Glucokinase Peptidase_M49 PF03571.15 NODE_49436_length_377_cov_93.625731_g41546_i0forward_frame_3 - 0.21 9.9 0.1 0.26 9.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase family M49 Trp_oprn_chp PF09534.10 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_2 - 1.7 8.4 5.2 2.2 8.0 5.2 1.2 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) BatD PF13584.6 NODE_49431_length_377_cov_147.274854_g41541_i0forward_frame_3 - 0.13 11.1 1.6 0.16 10.7 1.6 1.2 1 0 0 1 1 1 0 Oxygen tolerance DUF3886 PF13025.6 NODE_49429_length_377_cov_182.388889_g41539_i0reverse_frame_2 - 0.018 15.2 8.0 0.078 13.2 7.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3886) Snapin_Pallidin PF14712.6 NODE_49429_length_377_cov_182.388889_g41539_i0reverse_frame_2 - 0.028 14.8 1.2 0.054 13.9 1.2 1.4 1 0 0 1 1 1 0 Snapin/Pallidin LCD1 PF09798.9 NODE_49429_length_377_cov_182.388889_g41539_i0reverse_frame_2 - 0.29 9.6 0.9 0.24 9.9 0.9 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein FAM153 PF15722.5 NODE_49425_length_377_cov_319.181287_g41535_i0forward_frame_3 - 0.02 15.2 0.0 0.14 12.5 0.0 1.9 1 1 1 2 2 2 0 FAM153 family Tnp_22_trimer PF17489.2 NODE_49425_length_377_cov_319.181287_g41535_i0forward_frame_3 - 0.22 11.5 3.5 1.5 8.9 0.3 2.7 1 1 1 2 2 2 0 L1 transposable element trimerization domain PsbK PF02533.15 NODE_49424_length_377_cov_324.701754_g41534_i0reverse_frame_2 - 3.4e-19 68.7 7.5 4.4e-19 68.3 7.0 1.5 1 1 0 1 1 1 1 Photosystem II 4 kDa reaction centre component DUF2457 PF10446.9 NODE_49424_length_377_cov_324.701754_g41534_i0forward_frame_3 - 0.17 11.0 1.3 0.18 11.0 1.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) TRIQK PF15168.6 NODE_49421_length_377_cov_395.283626_g41531_i0forward_frame_2 - 0.013 15.4 0.5 0.022 14.6 0.5 1.4 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family Dpy-30 PF05186.13 NODE_49410_length_377_cov_29661.549708_g41523_i0forward_frame_2 - 0.098 12.4 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 Dpy-30 motif Propeptide_C1 PF08127.13 NODE_49409_length_377_cov_228901.140351_g41522_i0reverse_frame_3 - 0.00043 20.1 0.0 0.0011 18.8 0.0 1.6 1 1 0 1 1 1 1 Peptidase family C1 propeptide Herpes_LMP1 PF05297.11 NODE_49402_length_378_cov_2.212828_g41515_i0reverse_frame_3 - 0.93 8.6 3.5 0.9 8.7 3.5 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Ribophorin_I PF04597.14 NODE_49400_length_378_cov_2.241983_g41513_i0forward_frame_3 - 1.6e-06 27.6 0.5 1.7e-06 27.5 0.5 1.0 1 0 0 1 1 1 1 Ribophorin I Pkinase PF00069.25 NODE_49396_length_378_cov_2.355685_g41509_i0reverse_frame_2 - 9.2e-20 71.1 0.0 1e-19 70.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49396_length_378_cov_2.355685_g41509_i0reverse_frame_2 - 3.2e-05 23.4 0.0 3.6e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase GAPT PF11770.8 NODE_49392_length_378_cov_2.737609_g41505_i0forward_frame_2 - 0.064 13.1 2.1 0.24 11.2 0.6 2.1 2 0 0 2 2 2 0 GRB2-binding adapter (GAPT) UPF0728 PF15092.6 NODE_49391_length_378_cov_2.836735_g41504_i0reverse_frame_3 - 0.016 15.0 0.1 0.024 14.5 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 Kinase-PolyVal PF18762.1 NODE_49390_length_378_cov_2.874636_g41503_i0forward_frame_2 - 0.06 13.3 0.2 0.21 11.5 0.2 1.6 1 1 1 2 2 2 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins Myosin_TH1 PF06017.13 NODE_49389_length_378_cov_2.895044_g41502_i0forward_frame_3 - 5.8e-12 45.7 0.1 6.7e-12 45.5 0.1 1.1 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding PH_3 PF14593.6 NODE_49389_length_378_cov_2.895044_g41502_i0forward_frame_3 - 0.00072 19.6 0.4 0.0011 19.1 0.4 1.3 1 0 0 1 1 1 1 PH domain DUF267 PF03268.14 NODE_49389_length_378_cov_2.895044_g41502_i0forward_frame_2 - 0.063 12.1 0.2 0.075 11.9 0.2 1.1 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF267 DUF4787 PF16029.5 NODE_49387_length_378_cov_3.612245_g41500_i0forward_frame_3 - 0.038 14.1 3.7 0.073 13.2 3.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4787) MORN PF02493.20 NODE_49384_length_378_cov_4.206997_g41497_i0reverse_frame_3 - 1.5e-07 30.9 21.1 0.00029 20.6 0.3 5.2 6 0 0 6 6 6 4 MORN repeat AC_N PF16214.5 NODE_49384_length_378_cov_4.206997_g41497_i0forward_frame_2 - 2.6 7.1 5.0 3.1 6.8 5.0 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Auts2 PF15336.6 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 0.54 10.3 15.5 0.81 9.8 15.5 1.3 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Connexin PF00029.19 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 1.9 8.2 6.3 2.3 7.9 6.3 1.1 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 2.3 6.9 5.1 2.2 7.0 5.1 1.0 1 0 0 1 1 1 0 Presenilin TT_ORF1 PF02956.14 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 3 6.4 6.6 3.1 6.4 6.6 1.1 1 0 0 1 1 1 0 TT viral orf 1 DUF2058 PF09831.9 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 3.6 7.7 13.8 4.3 7.5 13.8 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2058) VEFS-Box PF09733.9 NODE_49375_length_378_cov_61.390671_g41488_i0forward_frame_3 - 0.016 15.0 0.2 0.019 14.8 0.2 1.1 1 0 0 1 1 1 0 VEFS-Box of polycomb protein Gastrin PF00918.17 NODE_49375_length_378_cov_61.390671_g41488_i0forward_frame_3 - 0.092 13.7 1.1 0.12 13.4 1.1 1.1 1 0 0 1 1 1 0 Gastrin/cholecystokinin family Fib_alpha PF08702.10 NODE_49375_length_378_cov_61.390671_g41488_i0forward_frame_2 - 0.088 13.0 4.9 0.11 12.7 4.9 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Ribosom_S12_S23 PF00164.25 NODE_49373_length_378_cov_63.215743_g41486_i0reverse_frame_2 - 1.3e-43 147.2 0.8 1.9e-43 146.7 0.8 1.2 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Transthyretin PF00576.21 NODE_49372_length_378_cov_64.358601_g41485_i0reverse_frame_2 - 1.4e-21 77.2 0.1 2e-21 76.7 0.1 1.2 1 0 0 1 1 1 1 HIUase/Transthyretin family DUF728 PF05304.12 NODE_49372_length_378_cov_64.358601_g41485_i0forward_frame_2 - 0.091 12.6 0.2 0.11 12.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) CASP_C PF08172.12 NODE_49369_length_378_cov_74.355685_g41482_i0reverse_frame_2 - 0.021 14.2 0.3 0.023 14.1 0.3 1.2 1 0 0 1 1 1 0 CASP C terminal PH_3 PF14593.6 NODE_49365_length_378_cov_77.900875_g41478_i0reverse_frame_3 - 0.00014 21.9 0.1 0.00028 20.9 0.0 1.5 2 0 0 2 2 2 1 PH domain PH_6 PF15406.6 NODE_49365_length_378_cov_77.900875_g41478_i0reverse_frame_3 - 0.00073 19.8 0.0 0.0013 19.0 0.0 1.3 1 0 0 1 1 1 1 Pleckstrin homology domain PH PF00169.29 NODE_49365_length_378_cov_77.900875_g41478_i0reverse_frame_3 - 0.0011 19.5 0.1 0.0021 18.5 0.0 1.5 2 0 0 2 2 2 1 PH domain PH_8 PF15409.6 NODE_49365_length_378_cov_77.900875_g41478_i0reverse_frame_3 - 0.0017 18.6 0.0 0.0033 17.7 0.0 1.5 1 0 0 1 1 1 1 Pleckstrin homology domain Mcp5_PH PF12814.7 NODE_49365_length_378_cov_77.900875_g41478_i0reverse_frame_3 - 0.019 15.1 0.1 0.039 14.1 0.0 1.6 2 0 0 2 2 2 0 Meiotic cell cortex C-terminal pleckstrin homology rpo30_N PF12410.8 NODE_49365_length_378_cov_77.900875_g41478_i0reverse_frame_3 - 0.041 13.8 0.0 0.052 13.5 0.0 1.1 1 0 0 1 1 1 0 Poxvirus DNA dependent RNA polymerase 30kDa subunit PH_11 PF15413.6 NODE_49365_length_378_cov_77.900875_g41478_i0reverse_frame_3 - 0.086 13.3 0.1 0.18 12.3 0.0 1.6 2 0 0 2 2 2 0 Pleckstrin homology domain MCR PF18509.1 NODE_49360_length_378_cov_86.419825_g41473_i0forward_frame_3 - 0.16 11.6 1.1 0.26 10.9 1.1 1.4 1 0 0 1 1 1 0 Magnetochrome domain PPR_2 PF13041.6 NODE_49356_length_378_cov_100.384840_g41469_i0reverse_frame_2 - 7.6e-08 32.4 0.0 0.00037 20.6 0.0 2.1 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_49356_length_378_cov_100.384840_g41469_i0reverse_frame_2 - 0.00063 19.8 0.0 0.0046 17.0 0.0 1.9 1 1 0 2 2 2 1 Pentatricopeptide repeat domain PPR PF01535.20 NODE_49356_length_378_cov_100.384840_g41469_i0reverse_frame_2 - 0.0014 18.8 0.0 0.45 10.9 0.0 2.3 2 0 0 2 2 2 2 PPR repeat PPR_long PF17177.4 NODE_49356_length_378_cov_100.384840_g41469_i0reverse_frame_2 - 0.16 11.3 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP DUF4573 PF15140.6 NODE_49355_length_378_cov_105.892128_g41468_i0reverse_frame_3 - 0.0062 16.4 2.2 0.0082 16.0 2.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4573) HscB_4_cys PF18256.1 NODE_49355_length_378_cov_105.892128_g41468_i0reverse_frame_2 - 0.086 12.7 1.1 0.18 11.7 1.1 1.5 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif Como_SCP PF02248.16 NODE_49353_length_378_cov_118.760933_g41466_i0reverse_frame_2 - 0.027 14.1 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Small coat protein Crust_neurohorm PF01147.17 NODE_49350_length_378_cov_137.128280_g41463_i0reverse_frame_2 - 0.13 12.1 0.2 0.2 11.5 0.2 1.2 1 0 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family Isochorismatase PF00857.20 NODE_49350_length_378_cov_137.128280_g41463_i0forward_frame_2 - 3.1e-11 43.8 0.0 4.3e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family Arteri_Gl PF00951.18 NODE_49350_length_378_cov_137.128280_g41463_i0forward_frame_2 - 0.027 14.3 0.1 0.038 13.8 0.1 1.2 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein Glucosamine_iso PF01182.20 NODE_49349_length_378_cov_137.903790_g41462_i0forward_frame_3 - 0.084 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Ammonium_transp PF00909.21 NODE_49346_length_378_cov_209.469388_g41459_i0reverse_frame_3 - 0.075 11.7 0.5 0.086 11.5 0.5 1.0 1 0 0 1 1 1 0 Ammonium Transporter Family HEAT PF02985.22 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 4.9e-10 38.8 6.0 0.00063 19.8 0.0 3.3 3 0 0 3 3 3 2 HEAT repeat HEAT_EZ PF13513.6 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 4.5e-07 30.2 12.2 0.0042 17.6 6.5 2.2 2 0 0 2 2 2 2 HEAT-like repeat HEAT_2 PF13646.6 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 6.2e-07 29.7 7.6 9.7e-07 29.1 7.6 1.3 1 0 0 1 1 1 1 HEAT repeats Cnd1 PF12717.7 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 1.3e-06 28.6 0.0 1.5e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 0.0048 15.5 0.5 0.0058 15.2 0.5 1.0 1 0 0 1 1 1 1 Adaptin N terminal region CLASP_N PF12348.8 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 0.039 13.5 0.2 0.43 10.1 0.2 2.0 1 1 0 1 1 1 0 CLASP N terminal Arm PF00514.23 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 0.057 13.5 6.0 2.8 8.1 0.2 3.0 2 1 1 3 3 3 0 Armadillo/beta-catenin-like repeat Cohesin_HEAT PF12765.7 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 0.091 13.1 1.5 0.9 9.9 0.3 2.2 2 0 0 2 2 2 0 HEAT repeat associated with sister chromatid cohesion HEAT_PBS PF03130.16 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 2.9 8.8 12.9 5.6 7.9 0.1 3.5 3 0 0 3 3 3 0 PBS lyase HEAT-like repeat Orthopox_F8 PF05886.11 NODE_49340_length_378_cov_465.565598_g41453_i0reverse_frame_3 - 0.11 12.6 2.7 1.2 9.3 1.9 2.2 2 0 0 2 2 2 0 Orthopoxvirus F8 protein SCO1-SenC PF02630.14 NODE_49340_length_378_cov_465.565598_g41453_i0reverse_frame_3 - 0.15 11.9 0.2 0.21 11.5 0.2 1.2 1 0 0 1 1 1 0 SCO1/SenC DUF4599 PF15371.6 NODE_49338_length_378_cov_1840.151603_g41451_i0reverse_frame_3 - 0.095 13.3 1.2 0.14 12.8 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4599) Calcyon PF06387.11 NODE_49336_length_378_cov_8888.685131_g41449_i0reverse_frame_3 - 0.83 9.6 4.9 9.6 6.1 0.3 2.7 1 1 3 4 4 4 0 D1 dopamine receptor-interacting protein (calcyon) Ribosomal_L37 PF08561.10 ORF99266 - 2.5 8.6 6.6 4.4 7.9 6.6 1.5 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L37 Med26 PF08711.11 ORF99013 - 3.8e-07 30.0 0.1 1.8e-06 27.9 0.1 2.1 2 0 0 2 2 2 1 TFIIS helical bundle-like domain MeMO_Hyd_G PF02964.16 ORF99013 - 0.66 10.0 4.2 2.4 8.1 4.2 1.8 1 1 0 1 1 1 0 Methane monooxygenase, hydrolase gamma chain EamA PF00892.20 ORF98896 - 4.8e-09 36.5 6.7 6e-09 36.2 6.7 1.1 1 0 0 1 1 1 1 EamA-like transporter family DUF2231 PF09990.9 ORF98896 - 0.017 15.5 2.2 0.025 15.0 1.5 1.6 2 1 0 2 2 2 0 Predicted membrane protein (DUF2231) SLATT_6 PF18169.1 ORF98896 - 0.1 12.2 0.4 0.1 12.2 0.4 1.9 1 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 DUF4118 PF13493.6 ORF98896 - 0.48 10.2 7.2 0.13 12.1 0.6 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4118) Ribosomal_L32p PF01783.23 ORF98299 - 0.027 14.7 2.0 5.7 7.3 0.1 2.5 2 1 0 2 2 2 0 Ribosomal L32p protein family Ribosomal_L37 PF08561.10 ORF96920 - 2.5 8.6 6.6 4.4 7.9 6.6 1.5 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L37 His_Phos_1 PF00300.22 ORF96832 - 3.3e-05 23.7 0.0 5.9e-05 22.8 0.0 1.4 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) cNMP_binding PF00027.29 ORF95911 - 1.7e-15 56.9 0.0 2.1e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF4538 PF15061.6 ORF95411 - 4.7 7.0 5.2 3.2 7.5 0.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4538) UCH PF00443.29 ORF95223 - 1e-30 107.1 0.3 1.2e-30 106.9 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF95223 - 5.9e-05 22.8 0.0 7.4e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase CW_binding_1 PF01473.20 ORF95223 - 0.065 13.6 4.0 0.18 12.2 4.0 1.8 1 0 0 1 1 1 0 Putative cell wall binding repeat NAD_binding_10 PF13460.6 ORF94450 - 6e-11 42.6 0.0 8.6e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding DUF2070 PF09843.9 ORF92653 - 3.1 6.0 7.1 3.4 5.9 7.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) adh_short_C2 PF13561.6 ORF9250 - 9.1e-17 61.4 0.2 3.3e-10 39.9 0.1 2.0 1 1 1 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF9250 - 0.011 15.3 0.0 0.019 14.5 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase Ank_5 PF13857.6 ORF92083 - 2.9e-12 46.6 1.4 2e-05 24.8 0.2 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF92083 - 3.9e-10 40.2 0.2 0.00077 20.0 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF92083 - 2.2e-07 31.3 3.7 1.1e-05 25.9 0.6 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF92083 - 3.3e-07 30.1 0.4 0.0022 18.3 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF92083 - 6.8e-06 26.3 1.9 0.052 14.0 0.2 3.2 3 0 0 3 3 3 2 Ankyrin repeat DUF1187 PF06688.11 ORF92083 - 0.014 15.7 0.0 3.5 8.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1187) Mg_trans_NIPA PF05653.14 ORF91811 - 9.7e-11 41.3 1.9 1e-10 41.2 1.9 1.0 1 0 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 ORF91811 - 0.00038 20.6 6.1 0.0016 18.6 2.3 2.1 2 0 0 2 2 2 1 EamA-like transporter family DctQ PF04290.12 ORF91811 - 0.0015 18.4 0.4 0.002 18.0 0.4 1.2 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporters, DctQ component Oxidored_q2 PF00420.24 ORF91811 - 0.097 12.3 4.2 0.15 11.7 4.0 1.4 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Ank_4 PF13637.6 ORF9169 - 7.8e-09 35.9 0.1 3.5e-08 33.8 0.0 1.9 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF9169 - 1.6e-08 34.1 0.1 0.015 15.8 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF9169 - 2.9e-08 33.8 0.2 0.00017 21.8 0.0 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF9169 - 1.5e-07 31.9 0.0 2.1e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF9169 - 9.1e-06 25.9 0.0 0.18 12.3 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat AvrPtoB_bdg PF16847.5 ORF9169 - 0.098 13.2 0.1 1.1 9.8 0.0 2.1 1 1 0 2 2 2 0 Avirulence AvrPtoB, BAK1-binding domain Ras PF00071.22 ORF91363 - 3.1e-15 56.2 0.0 3.8e-15 55.9 0.0 1.1 1 0 0 1 1 1 1 Ras family RsgA_GTPase PF03193.16 ORF91363 - 0.0051 16.7 0.0 0.0063 16.4 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase Arf PF00025.21 ORF91363 - 0.14 11.6 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family DUF3350 PF11830.8 ORF9077 - 0.11 12.8 1.8 0.13 12.6 0.6 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3350) TTL PF03133.15 ORF8835 - 2.1e-09 37.0 0.4 2.1e-09 37.0 0.4 1.9 1 1 1 2 2 2 2 Tubulin-tyrosine ligase family Augurin PF15187.6 ORF88135 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF88135 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin CENP-F_leu_zip PF10473.9 ORF86654 - 0.0021 18.1 13.7 0.0028 17.7 13.7 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HSP70 PF00012.20 ORF86654 - 0.0077 14.5 12.1 0.01 14.1 12.1 1.2 1 0 0 1 1 1 1 Hsp70 protein DUF3552 PF12072.8 ORF86654 - 0.02 14.3 17.1 0.025 14.0 17.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TMF_DNA_bd PF12329.8 ORF86654 - 0.032 14.2 24.6 0.23 11.5 14.4 2.7 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding COMP PF11598.8 ORF86654 - 0.066 13.7 4.5 1.4 9.5 0.0 3.1 3 0 0 3 3 3 0 Cartilage oligomeric matrix protein FliD_C PF07195.12 ORF86654 - 0.072 12.5 10.9 0.051 13.0 8.4 1.8 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Nup88 PF10168.9 ORF86654 - 0.081 10.7 13.4 0.095 10.5 13.4 1.0 1 0 0 1 1 1 0 Nuclear pore component End3 PF12761.7 ORF86654 - 0.14 12.3 16.1 0.039 14.1 9.8 2.0 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 DUF4407 PF14362.6 ORF86654 - 0.19 11.0 7.4 0.25 10.7 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CHASE6_C PF17150.4 ORF86654 - 0.2 12.3 7.9 0.81 10.4 2.3 2.3 1 1 1 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain BLOC1_2 PF10046.9 ORF86654 - 0.26 11.6 17.7 0.42 10.9 11.9 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF3450 PF11932.8 ORF86654 - 0.28 10.5 12.9 0.69 9.2 12.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 ORF86654 - 0.28 10.7 8.6 0.34 10.4 8.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Atg14 PF10186.9 ORF86654 - 0.33 10.0 13.3 0.38 9.8 13.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 MMPL PF03176.15 ORF86654 - 0.39 9.6 1.3 0.46 9.4 1.3 1.1 1 0 0 1 1 1 0 MMPL family Tropomyosin_1 PF12718.7 ORF86654 - 0.43 10.7 18.9 0.37 11.0 17.7 1.5 1 1 0 1 1 1 0 Tropomyosin like USP8_interact PF08941.10 ORF86654 - 0.47 10.2 9.5 2.9 7.7 5.8 2.1 1 1 1 2 2 2 0 USP8 interacting GBP_C PF02841.14 ORF86654 - 0.5 9.7 18.0 0.6 9.5 18.0 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF4795 PF16043.5 ORF86654 - 0.54 9.8 17.5 1.7 8.2 3.3 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Fib_alpha PF08702.10 ORF86654 - 0.57 10.4 16.5 9.2 6.4 13.6 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF86654 - 0.75 10.3 14.7 0.12 12.9 8.2 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 TMPIT PF07851.13 ORF86654 - 0.98 8.6 11.6 1.2 8.3 11.6 1.2 1 0 0 1 1 1 0 TMPIT-like protein Cut12 PF11500.8 ORF86654 - 1.1 9.1 15.1 1.3 8.9 3.8 2.2 1 1 1 2 2 2 0 Spindle pole body formation-associated protein ALMT PF11744.8 ORF86654 - 1.4 7.6 10.1 1.5 7.6 10.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF2203 PF09969.9 ORF86654 - 1.6 9.5 11.5 4.4 8.0 9.5 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) APG6_N PF17675.1 ORF86654 - 1.6 9.2 15.1 2.3 8.8 15.1 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region FAM76 PF16046.5 ORF86654 - 1.8 7.9 17.3 2.7 7.3 17.3 1.3 1 1 0 1 1 1 0 FAM76 protein DUF641 PF04859.12 ORF86654 - 1.9 8.8 14.3 1 9.7 7.6 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) CPSase_L_D3 PF02787.19 ORF86654 - 2 8.8 8.0 6.4 7.1 8.0 1.8 1 1 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Erf4 PF10256.9 ORF86654 - 2.7 8.1 6.1 15 5.7 0.5 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 7/ERF4 family DUF1664 PF07889.12 ORF86654 - 3.1 7.8 10.8 4.3 7.4 8.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF724 PF05266.14 ORF86654 - 4.1 7.2 15.1 6 6.6 15.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Med4 PF10018.9 ORF86654 - 4.6 6.9 14.3 9.2 5.9 14.4 1.5 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF4094 PF13334.6 ORF86654 - 5.2 7.6 9.2 0.86 10.1 4.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) CREPT PF16566.5 ORF86654 - 5.6 7.1 13.8 10 6.3 13.4 1.4 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour Fzo_mitofusin PF04799.13 ORF86654 - 5.8 6.4 10.5 10 5.6 6.3 2.2 1 1 1 2 2 2 0 fzo-like conserved region Aa_trans PF01490.18 ORF86225 - 1.8e-05 23.7 5.3 2e-05 23.5 5.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF86225 - 7.2e-05 22.0 6.1 8.4e-05 21.8 6.1 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aromatic_hydrox PF11723.8 ORF86225 - 0.076 12.5 0.0 0.094 12.2 0.0 1.0 1 0 0 1 1 1 0 Homotrimeric ring hydroxylase ABC_tran PF00005.27 ORF86211 - 6.1e-13 49.5 0.0 1.1e-12 48.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 ORF86211 - 0.00078 19.9 0.0 0.0011 19.4 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF86211 - 0.0058 16.9 0.0 0.0084 16.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF86211 - 0.0066 16.2 0.0 0.01 15.5 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 ORF86211 - 0.014 15.3 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_15 PF13175.6 ORF86211 - 0.024 14.4 0.2 0.04 13.6 0.2 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_7 PF12775.7 ORF86211 - 0.028 13.9 0.0 0.037 13.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region PRK PF00485.18 ORF86211 - 0.032 14.0 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family RsgA_GTPase PF03193.16 ORF86211 - 0.033 14.1 0.0 0.047 13.6 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 ORF86211 - 0.067 13.7 0.1 0.11 13.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 ORF86211 - 0.068 12.9 0.0 0.094 12.4 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase ATP-synt_ab PF00006.25 ORF86211 - 0.084 12.5 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_21 PF13304.6 ORF86211 - 0.1 12.4 0.7 0.37 10.6 0.1 1.9 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system MeaB PF03308.16 ORF86211 - 0.14 11.1 0.0 0.17 10.8 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF3778 PF12620.8 ORF86211 - 0.14 11.8 0.0 0.43 10.2 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3778) Zeta_toxin PF06414.12 ORF86211 - 0.15 11.4 0.0 0.18 11.0 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin AAA_5 PF07728.14 ORF86211 - 0.2 11.7 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AFG1_ATPase PF03969.16 ORF85981 - 4.1e-28 98.3 0.0 4.5e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 AFG1-like ATPase GBP_repeat PF02526.14 ORF85981 - 0.1 12.3 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Glycophorin-binding protein Oxidored-like PF09791.9 ORF83796 - 5.4 6.8 8.4 12 5.7 1.0 2.5 2 0 0 2 2 2 0 Oxidoreductase-like protein, N-terminal CNP1 PF08750.11 ORF82541 - 0.074 13.0 0.1 0.12 12.3 0.1 1.3 1 0 0 1 1 1 0 CNP1-like family UPF0223 PF05256.12 ORF82538 - 0.047 14.0 0.1 0.089 13.1 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0223) DALR_2 PF09190.11 ORF82538 - 0.069 13.6 0.2 0.14 12.7 0.2 1.5 1 1 0 1 1 1 0 DALR domain ADP_ribosyl_GH PF03747.14 ORF82320 - 9e-06 25.6 0.4 1.2e-05 25.2 0.4 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase PLDc PF00614.22 ORF81601 - 3e-07 30.4 0.4 5.1e-07 29.6 0.4 1.4 1 0 0 1 1 1 1 Phospholipase D Active site motif PLDc_2 PF13091.6 ORF81601 - 1.2e-06 28.5 0.1 1.3e-06 28.3 0.1 1.4 1 1 0 1 1 1 1 PLD-like domain DUF4203 PF13886.6 ORF81503 - 0.00022 21.0 16.8 0.00026 20.7 16.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) DUF676 PF05057.14 ORF81400 - 9.3e-16 58.0 0.0 1.1e-15 57.7 0.0 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF81400 - 0.16 11.7 0.0 0.26 11.1 0.0 1.2 1 1 0 1 1 1 0 Palmitoyl protein thioesterase PCAF_N PF06466.11 ORF81281 - 0.15 11.6 6.6 1.6 8.2 0.5 2.0 1 1 1 2 2 2 0 PCAF (P300/CBP-associated factor) N-terminal domain MFS_1 PF07690.16 ORF81246 - 2.4e-13 49.8 18.9 2.7e-13 49.6 18.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF81246 - 0.022 13.4 15.3 0.16 10.5 1.5 2.0 1 1 1 2 2 2 0 MFS/sugar transport protein DUF4293 PF14126.6 ORF81246 - 0.9 9.8 10.1 1.5 9.1 3.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4293) EMP70 PF02990.16 ORF81246 - 3.3 6.3 8.5 4.1 6.0 8.5 1.2 1 0 0 1 1 1 0 Endomembrane protein 70 Toxin_GhoT_OrtT PF10753.9 ORF81246 - 3.8 7.8 8.1 17 5.7 2.6 2.3 2 0 0 2 2 2 0 Toxin GhoT_OrtT Peptidase_U4 PF03419.13 ORF81246 - 8 5.7 14.0 9.5 5.4 14.0 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA ABC2_membrane_5 PF13346.6 ORF81246 - 8.3 5.9 15.2 0.42 10.1 4.0 2.0 2 0 0 2 2 2 0 ABC-2 family transporter protein DUF525 PF04379.14 ORF80358 - 1.5e-33 114.9 0.0 1.8e-33 114.6 0.0 1.1 1 0 0 1 1 1 1 ApaG domain DUF4354 PF14263.6 ORF80358 - 0.068 13.0 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) DUF1499 PF07386.11 ORF79881 - 1.8e-12 47.8 0.0 3.8e-12 46.8 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1499) BatD PF13584.6 ORF79816 - 0.011 14.6 0.1 0.13 11.1 0.1 1.9 1 1 0 1 1 1 0 Oxygen tolerance Imm17 PF15562.6 ORF79816 - 0.013 15.4 0.0 0.013 15.4 0.0 1.7 2 0 0 2 2 2 0 Immunity protein 17 Otopetrin PF03189.13 ORF79816 - 0.041 12.7 0.1 0.047 12.5 0.1 1.2 1 0 0 1 1 1 0 Otopetrin Connexin PF00029.19 ORF79816 - 0.13 12.0 2.1 0.78 9.5 0.2 2.0 1 1 1 2 2 2 0 Connexin DUF443 PF04276.12 ORF79816 - 0.21 11.4 4.3 0.06 13.2 1.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF443) Srg PF02118.21 ORF79816 - 0.22 11.1 7.3 0.3 10.7 7.3 1.1 1 0 0 1 1 1 0 Srg family chemoreceptor FAM176 PF14851.6 ORF79816 - 0.23 11.1 2.2 0.52 10.0 1.3 1.8 2 0 0 2 2 2 0 FAM176 family Orf78 PF06024.12 ORF79816 - 2.2 8.6 8.0 0.089 13.1 0.7 2.1 2 1 0 2 2 2 0 Orf78 (ac78) ETRAMP PF09716.10 ORF79816 - 2.4 8.3 7.8 15 5.8 7.8 2.2 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Ac76 PF05814.11 ORF79816 - 2.4 8.2 6.9 0.13 12.3 1.1 1.8 2 0 0 2 2 2 0 Orf76 (Ac76) DUF459 PF04311.13 ORF78443 - 0.045 12.7 0.2 0.053 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF459) DUF4293 PF14126.6 ORF78101 - 0.16 12.2 11.9 0.2 11.9 11.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4293) Ni_hydr_CYTB PF01292.20 ORF78101 - 0.17 11.4 7.0 0.2 11.2 7.0 1.2 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 Fig1 PF12351.8 ORF78101 - 0.25 11.3 6.9 0.29 11.0 6.9 1.1 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 Tmpp129 PF10272.9 ORF78101 - 0.75 9.0 5.5 0.9 8.8 5.5 1.0 1 0 0 1 1 1 0 Putative transmembrane protein precursor DUF2207 PF09972.9 ORF78101 - 6.8 5.3 7.9 9.4 4.9 7.9 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF448 PF04296.13 ORF77605 - 0.12 12.3 0.0 0.19 11.6 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF448) DNA_RNApol_7kD PF03604.13 ORF76778 - 0.0014 18.2 0.8 0.0014 18.2 0.8 2.0 2 1 0 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.7 ORF76778 - 0.0043 17.0 5.1 0.0096 15.9 5.2 1.6 1 1 0 1 1 1 1 Double zinc ribbon zinc-ribbons_6 PF07191.12 ORF76778 - 0.096 12.7 1.2 0.096 12.7 1.2 2.3 2 1 1 3 3 3 0 zinc-ribbons zf-ACC PF17848.1 ORF76778 - 0.45 10.6 0.1 0.45 10.6 0.1 3.0 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain Prok-RING_1 PF14446.6 ORF76778 - 4.3 7.4 8.8 0.5 10.3 0.3 2.6 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 Acetyltransf_13 PF13880.6 ORF7653 - 0.027 14.5 0.4 4.4 7.4 0.2 2.3 1 1 1 2 2 2 0 ESCO1/2 acetyl-transferase RseC_MucC PF04246.12 ORF76481 - 0.084 12.8 0.6 0.084 12.8 0.6 1.6 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DER1 PF04511.15 ORF76225 - 0.0017 18.3 6.7 0.0024 17.9 6.7 1.3 1 1 0 1 1 1 1 Der1-like family Rhomboid PF01694.22 ORF76225 - 0.015 15.3 2.0 0.019 15.0 2.0 1.2 1 0 0 1 1 1 0 Rhomboid family zf-ACC PF17848.1 ORF75402 - 0.13 12.4 0.1 0.24 11.5 0.1 1.5 1 0 0 1 1 1 0 Acetyl-coA carboxylase zinc finger domain HisKA PF00512.25 ORF75218 - 0.16 12.1 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain Mg_trans_NIPA PF05653.14 ORF74812 - 9.7e-11 41.3 1.9 1e-10 41.2 1.9 1.0 1 0 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 ORF74812 - 0.00038 20.6 6.1 0.0016 18.6 2.3 2.1 2 0 0 2 2 2 1 EamA-like transporter family DctQ PF04290.12 ORF74812 - 0.0015 18.4 0.4 0.002 18.0 0.4 1.2 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporters, DctQ component Oxidored_q2 PF00420.24 ORF74812 - 0.097 12.3 4.2 0.15 11.7 4.0 1.4 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SnoaL_2 PF12680.7 ORF74732 - 0.088 13.5 0.3 0.15 12.7 0.3 1.3 1 0 0 1 1 1 0 SnoaL-like domain DUF1754 PF08555.10 ORF72606 - 7.5e-07 29.9 15.6 5.2e-06 27.2 15.6 1.9 1 1 0 1 1 1 1 Eukaryotic family of unknown function (DUF1754) GvpL_GvpF PF06386.11 ORF72606 - 0.028 14.4 2.6 0.038 13.9 2.6 1.1 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF NAD_Gly3P_dh_C PF07479.14 ORF72606 - 0.028 14.7 0.4 0.043 14.1 0.4 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HLH PF00010.26 ORF72606 - 0.18 11.8 1.6 5.4 7.1 0.0 2.8 3 0 0 3 3 3 0 Helix-loop-helix DNA-binding domain OSR1_C PF12202.8 ORF72606 - 0.37 11.1 0.2 0.37 11.1 0.2 2.0 2 0 0 2 2 2 0 Oxidative-stress-responsive kinase 1 C-terminal domain Shisa PF13908.6 ORF72555 - 0.0012 19.2 2.0 0.0013 19.0 2.0 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Phage_holin_3_6 PF07332.11 ORF72555 - 0.013 15.5 9.6 0.019 15.0 9.6 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF1700 PF08006.11 ORF72555 - 0.041 13.4 4.6 0.043 13.3 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Amnionless PF14828.6 ORF72555 - 0.2 10.5 2.5 0.24 10.2 2.5 1.2 1 0 0 1 1 1 0 Amnionless DUF4349 PF14257.6 ORF72555 - 0.25 10.8 6.6 0.34 10.3 6.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF2207 PF09972.9 ORF72555 - 0.34 9.6 1.7 0.35 9.6 1.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Hanta_G2 PF01561.16 ORF72555 - 0.56 8.8 3.1 0.82 8.2 3.1 1.3 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 VirB3 PF05101.13 ORF72555 - 6.2 7.1 9.4 10 6.4 9.4 1.3 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein Aa_trans PF01490.18 ORF7203 - 1.8e-05 23.7 5.3 2e-05 23.5 5.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF7203 - 7.2e-05 22.0 6.1 8.4e-05 21.8 6.1 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aromatic_hydrox PF11723.8 ORF7203 - 0.076 12.5 0.0 0.094 12.2 0.0 1.0 1 0 0 1 1 1 0 Homotrimeric ring hydroxylase DUF4411 PF14367.6 ORF71813 - 0.031 14.2 0.1 0.052 13.5 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4411) Helicase_PWI PF18149.1 ORF71813 - 0.058 13.6 0.8 0.093 12.9 0.2 1.7 2 0 0 2 2 2 0 N-terminal helicase PWI domain RNA_pol_Rpb1_7 PF04990.12 ORF71813 - 0.063 13.3 1.2 0.11 12.5 1.2 1.6 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 7 DUF641 PF04859.12 ORF71121 - 0.0045 17.3 1.5 0.0086 16.4 1.2 1.5 1 1 1 2 2 2 1 Plant protein of unknown function (DUF641) Fib_alpha PF08702.10 ORF71121 - 0.19 11.9 3.4 0.26 11.5 3.4 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Hus1 PF04005.12 ORF69270 - 0.00058 19.1 0.0 0.00088 18.5 0.0 1.3 1 1 0 1 1 1 1 Hus1-like protein DUF2635 PF10948.8 ORF69270 - 0.14 11.9 0.1 0.22 11.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2635) VESA1_N PF12785.7 ORF69270 - 0.27 10.1 0.0 0.33 9.9 0.0 1.1 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 DUF3658 PF12395.8 ORF67973 - 0.064 13.2 0.3 0.093 12.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function Clat_adaptor_s PF01217.20 ORF67812 - 5.1e-39 133.4 1.4 5.9e-39 133.2 1.4 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain Pkinase PF00069.25 ORF67720 - 5.3e-26 91.6 0.1 5.7e-26 91.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67720 - 6.6e-16 58.4 0.0 7.4e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF67720 - 0.00071 19.6 0.0 0.00088 19.3 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF67720 - 0.0013 18.1 0.1 0.0015 17.9 0.1 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF67720 - 0.0049 15.9 0.1 0.0051 15.8 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF67720 - 0.0056 15.5 0.0 0.0089 14.8 0.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF67720 - 0.043 13.2 0.0 0.057 12.8 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF67720 - 0.097 12.3 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 RIO1 family G0-G1_switch_2 PF15103.6 ORF67261 - 0.051 14.0 2.1 0.15 12.5 2.1 1.8 1 1 0 1 1 1 0 G0/G1 switch protein 2 Serinc PF03348.15 ORF67261 - 0.058 12.3 0.2 0.068 12.1 0.2 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) EphA2_TM PF14575.6 ORF67261 - 0.4 11.6 1.9 0.88 10.5 1.9 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Augurin PF15187.6 ORF6704 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF6704 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin DUF4763 PF15960.5 ORF66953 - 0.085 12.2 0.7 0.48 9.7 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4763) Augurin PF15187.6 ORF66803 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF66803 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks185.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks185.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks185.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks185.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Mitofilin PF09731.9 ORF65857 - 0.013 14.3 1.4 0.016 14.1 1.4 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein DUF4301 PF14134.6 ORF65857 - 0.041 12.7 0.4 0.051 12.4 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) AAA_16 PF13191.6 ORF65857 - 0.12 12.8 0.0 0.12 12.7 0.0 1.0 1 0 0 1 1 1 0 AAA ATPase domain Sec20 PF03908.13 ORF63471 - 0.07 13.1 1.1 0.12 12.3 1.1 1.5 1 1 0 1 1 1 0 Sec20 ABC_tran PF00005.27 ORF62704 - 1.4e-08 35.3 0.0 2.4e-08 34.6 0.0 1.4 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF62704 - 0.0092 15.8 0.0 0.012 15.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF5305 PF17231.2 ORF62588 - 0.0067 15.9 17.6 0.0076 15.7 17.6 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5305) MID_MedPIWI PF18296.1 ORF62588 - 0.15 11.9 5.7 0.16 11.7 5.7 1.1 1 0 0 1 1 1 0 MID domain of medPIWI Stevor PF17410.2 ORF62588 - 0.17 11.4 6.2 0.21 11.1 6.2 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame RIFIN PF02009.16 ORF62588 - 0.2 11.5 9.4 0.27 11.1 9.4 1.4 1 0 0 1 1 1 0 Rifin DUF5383 PF17355.2 ORF62588 - 0.42 11.0 4.9 0.8 10.1 4.1 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5383) DUF908 PF06012.12 ORF62588 - 7.2 5.9 12.8 7.5 5.9 12.8 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) DNA_topoisoIV PF00521.20 ORF6240 - 0.0095 14.9 1.2 0.011 14.7 1.2 1.0 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A LidA_Long_CC PF18641.1 ORF6240 - 0.014 15.4 0.5 0.014 15.4 0.5 1.8 2 0 0 2 2 2 0 LidA long coiled-coil domain RMF PF04957.12 ORF62311 - 0.37 11.0 3.0 4.5 7.6 0.2 2.4 1 1 1 2 2 2 0 Ribosome modulation factor DUF1810 PF08837.11 ORF60747 - 4.7e-14 52.4 0.0 5.7e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1810) Mistic PF11458.8 ORF60032 - 0.59 10.1 3.0 0.85 9.6 0.4 2.1 2 0 0 2 2 2 0 Membrane-integrating protein Mistic MAPEG PF01124.18 ORF59904 - 5.5e-06 26.3 2.3 7.5e-06 25.9 2.3 1.3 1 0 0 1 1 1 1 MAPEG family DUF4013 PF13197.6 ORF57829 - 0.046 13.5 0.1 0.06 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) Cytochrom_B558a PF05038.13 ORF57829 - 0.064 12.8 0.0 0.072 12.7 0.0 1.1 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit Med30 PF11315.8 ORF57416 - 0.064 13.4 0.6 0.093 12.9 0.4 1.4 1 1 0 1 1 1 0 Mediator complex subunit 30 CCDC66 PF15236.6 ORF5684 - 0.00017 21.5 15.9 0.00024 20.9 15.9 1.2 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 66 MCD PF05292.11 ORF5684 - 0.12 11.9 2.1 0.14 11.7 2.1 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase C-terminal domain DUF5401 PF17380.2 ORF5684 - 0.36 8.8 13.3 0.41 8.7 13.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) U79_P34 PF03064.16 ORF5684 - 0.62 9.4 12.1 0.67 9.3 12.1 1.1 1 0 0 1 1 1 0 HSV U79 / HCMV P34 FAM60A PF15396.6 ORF5684 - 1.5 8.7 8.8 1.9 8.4 8.8 1.0 1 0 0 1 1 1 0 Protein Family FAM60A Ureide_permease PF07168.11 ORF5684 - 3.6 6.2 4.7 4 6.1 4.7 1.1 1 0 0 1 1 1 0 Ureide permease YrhK PF14145.6 ORF55951 - 0.00037 20.3 1.6 0.00059 19.6 1.6 1.3 1 0 0 1 1 1 1 YrhK-like protein DUF1039 PF06287.11 ORF55326 - 0.088 13.2 0.1 0.15 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1039) Acetyltransf_1 PF00583.25 ORF55012 - 1.5e-07 31.7 0.0 1.8e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF55012 - 5.3e-07 29.6 0.8 7.1e-07 29.2 0.8 1.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF55012 - 8.1e-05 23.0 0.4 0.00011 22.5 0.4 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF55012 - 0.014 15.6 0.7 0.016 15.4 0.7 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF55012 - 0.039 13.9 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 FR47-like protein Gln-synt_C PF00120.24 ORF54875 - 2.1e-09 36.9 0.0 3.8e-09 36.0 0.0 1.4 1 1 1 2 2 2 1 Glutamine synthetase, catalytic domain LcrR PF09621.10 ORF54777 - 0.18 11.3 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 Type III secretion system regulator (LcrR) DUF4199 PF13858.6 ORF53408 - 6.5 7.1 8.3 30 5.0 8.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) MORN PF02493.20 ORF53053 - 9.7e-22 75.5 37.8 1.6e-05 24.5 1.5 6.1 6 0 0 6 6 6 6 MORN repeat Gln-synt_C-ter PF18318.1 ORF53053 - 0.0051 16.7 0.3 0.0051 16.7 0.3 1.9 2 0 0 2 2 2 1 Glutamine synthetase C-terminal domain Tudor_2 PF18104.1 ORF53053 - 1.7 8.4 8.2 2.3 7.9 0.5 3.6 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain ubiquitin PF00240.23 ORF52847 - 7.3e-06 25.6 0.0 1.1e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family FAM83 PF07894.12 ORF52847 - 0.1 12.1 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 FAM83 A-H DUF4710 PF15828.5 ORF48858 - 0.027 14.6 0.0 0.035 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) zf-C2H2_2 PF12756.7 ORF48143 - 0.00022 21.5 0.1 0.00028 21.2 0.1 1.2 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 ORF48143 - 0.0025 18.5 1.1 0.005 17.6 1.1 1.5 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF48143 - 0.0097 15.9 1.0 0.017 15.1 1.0 1.5 1 1 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF48143 - 0.034 14.6 1.2 0.058 13.9 1.2 1.4 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 ORF48143 - 0.045 14.0 0.5 0.078 13.3 0.5 1.4 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding DUF629 PF04780.12 ORF48143 - 0.21 10.1 0.5 0.27 9.7 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF629) Elf1 PF05129.13 ORF48143 - 4.3 7.4 7.7 0.14 12.2 1.6 1.6 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like FAM199X PF15814.5 ORF48028 - 0.51 9.3 8.4 0.59 9.1 8.4 1.0 1 0 0 1 1 1 0 Protein family FAM199X ERGIC_N PF13850.6 ORF47486 - 0.029 14.7 0.6 0.037 14.4 0.6 1.4 1 1 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Augurin PF15187.6 ORF46898 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF46898 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin AAA_2 PF07724.14 ORF46220 - 0.064 13.4 0.0 0.07 13.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) ABATE PF07336.11 ORF45817 - 0.013 16.2 5.0 0.015 16.0 5.0 1.1 1 0 0 1 1 1 0 Putative stress-induced transcription regulator RRF_GI PF12614.8 ORF4453 - 0.08 13.1 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Ribosome recycling factor DUF2799 PF10973.8 ORF43722 - 0.067 13.6 0.0 0.088 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2799) EF-hand_1 PF00036.32 ORF4329 - 1.6e-17 61.6 11.1 4.5e-07 29.0 2.1 4.0 4 0 0 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF4329 - 1.1e-16 61.0 9.1 2.7e-13 50.1 5.2 2.0 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF4329 - 1.3e-15 57.0 5.5 5.1e-12 45.4 0.7 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF4329 - 1.1e-12 46.7 4.1 0.00018 21.2 0.1 3.9 4 1 0 4 4 4 3 EF-hand domain EF-hand_9 PF14658.6 ORF4329 - 4e-06 27.1 0.1 7.8e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF4329 - 9.5e-05 21.7 8.6 0.012 15.1 2.9 3.0 2 1 1 3 3 3 2 EF hand EF-hand_4 PF12763.7 ORF4329 - 0.01 15.8 0.9 0.024 14.6 0.6 1.8 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand PhetRS_B1 PF18262.1 ORF4329 - 0.014 15.6 0.5 0.028 14.7 0.5 1.6 1 0 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain HTH_40 PF14493.6 ORF4329 - 0.036 14.5 0.1 0.065 13.7 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain GAS2 PF02187.17 ORF43039 - 0.083 13.0 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Growth-Arrest-Specific Protein 2 Domain Fer2_3 PF13085.6 ORF42053 - 0.057 13.4 0.1 0.099 12.7 0.1 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain FerA PF08165.11 ORF41288 - 0.15 12.1 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 FerA (NUC095) domain Med31 PF05669.12 ORF41124 - 7.3e-30 102.8 10.7 9.7e-30 102.4 10.7 1.1 1 0 0 1 1 1 1 SOH1 Daxx PF03344.15 ORF41124 - 0.056 13.5 0.3 1.6 8.9 0.1 2.5 1 1 2 3 3 3 0 Daxx N-terminal Rassf1C-interacting domain ERGIC_N PF13850.6 ORF41066 - 0.033 14.5 0.1 0.05 14.0 0.1 1.4 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) CENP-F_leu_zip PF10473.9 ORF4084 - 0.0021 18.1 13.7 0.0028 17.7 13.7 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HSP70 PF00012.20 ORF4084 - 0.0077 14.5 12.1 0.01 14.1 12.1 1.2 1 0 0 1 1 1 1 Hsp70 protein DUF3552 PF12072.8 ORF4084 - 0.02 14.3 17.1 0.025 14.0 17.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TMF_DNA_bd PF12329.8 ORF4084 - 0.032 14.2 24.6 0.23 11.5 14.4 2.7 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding COMP PF11598.8 ORF4084 - 0.066 13.7 4.5 1.4 9.5 0.0 3.1 3 0 0 3 3 3 0 Cartilage oligomeric matrix protein FliD_C PF07195.12 ORF4084 - 0.072 12.5 10.9 0.051 13.0 8.4 1.8 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Nup88 PF10168.9 ORF4084 - 0.081 10.7 13.4 0.095 10.5 13.4 1.0 1 0 0 1 1 1 0 Nuclear pore component End3 PF12761.7 ORF4084 - 0.14 12.3 16.1 0.039 14.1 9.8 2.0 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 DUF4407 PF14362.6 ORF4084 - 0.19 11.0 7.4 0.25 10.7 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CHASE6_C PF17150.4 ORF4084 - 0.2 12.3 7.9 0.81 10.4 2.3 2.3 1 1 1 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain BLOC1_2 PF10046.9 ORF4084 - 0.26 11.6 17.7 0.42 10.9 11.9 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF3450 PF11932.8 ORF4084 - 0.28 10.5 12.9 0.69 9.2 12.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 ORF4084 - 0.28 10.7 8.6 0.34 10.4 8.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Atg14 PF10186.9 ORF4084 - 0.33 10.0 13.3 0.38 9.8 13.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 MMPL PF03176.15 ORF4084 - 0.39 9.6 1.3 0.46 9.4 1.3 1.1 1 0 0 1 1 1 0 MMPL family Tropomyosin_1 PF12718.7 ORF4084 - 0.43 10.7 18.9 0.37 11.0 17.7 1.5 1 1 0 1 1 1 0 Tropomyosin like USP8_interact PF08941.10 ORF4084 - 0.47 10.2 9.5 2.9 7.7 5.8 2.1 1 1 1 2 2 2 0 USP8 interacting GBP_C PF02841.14 ORF4084 - 0.5 9.7 18.0 0.6 9.5 18.0 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF4795 PF16043.5 ORF4084 - 0.54 9.8 17.5 1.7 8.2 3.3 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Fib_alpha PF08702.10 ORF4084 - 0.57 10.4 16.5 9.2 6.4 13.6 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF4084 - 0.75 10.3 14.7 0.12 12.9 8.2 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 TMPIT PF07851.13 ORF4084 - 0.98 8.6 11.6 1.2 8.3 11.6 1.2 1 0 0 1 1 1 0 TMPIT-like protein Cut12 PF11500.8 ORF4084 - 1.1 9.1 15.1 1.3 8.9 3.8 2.2 1 1 1 2 2 2 0 Spindle pole body formation-associated protein ALMT PF11744.8 ORF4084 - 1.4 7.6 10.1 1.5 7.6 10.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF2203 PF09969.9 ORF4084 - 1.6 9.5 11.5 4.4 8.0 9.5 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) APG6_N PF17675.1 ORF4084 - 1.6 9.2 15.1 2.3 8.8 15.1 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region FAM76 PF16046.5 ORF4084 - 1.8 7.9 17.3 2.7 7.3 17.3 1.3 1 1 0 1 1 1 0 FAM76 protein DUF641 PF04859.12 ORF4084 - 1.9 8.8 14.3 1 9.7 7.6 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) CPSase_L_D3 PF02787.19 ORF4084 - 2 8.8 8.0 6.4 7.1 8.0 1.8 1 1 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Erf4 PF10256.9 ORF4084 - 2.7 8.1 6.1 15 5.7 0.5 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 7/ERF4 family DUF1664 PF07889.12 ORF4084 - 3.1 7.8 10.8 4.3 7.4 8.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF724 PF05266.14 ORF4084 - 4.1 7.2 15.1 6 6.6 15.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Med4 PF10018.9 ORF4084 - 4.6 6.9 14.3 9.2 5.9 14.4 1.5 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF4094 PF13334.6 ORF4084 - 5.2 7.6 9.2 0.86 10.1 4.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) CREPT PF16566.5 ORF4084 - 5.6 7.1 13.8 10 6.3 13.4 1.4 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour Fzo_mitofusin PF04799.13 ORF4084 - 5.8 6.4 10.5 10 5.6 6.3 2.2 1 1 1 2 2 2 0 fzo-like conserved region HlyE PF06109.13 ORF40833 - 0.064 12.6 1.8 0.078 12.3 0.7 1.6 1 1 1 2 2 2 0 Haemolysin E (HlyE) Mitofilin PF09731.9 ORF40683 - 0.013 14.3 1.4 0.016 14.1 1.4 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein DUF4301 PF14134.6 ORF40683 - 0.041 12.7 0.4 0.051 12.4 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) AAA_16 PF13191.6 ORF40683 - 0.12 12.8 0.0 0.12 12.7 0.0 1.0 1 0 0 1 1 1 0 AAA ATPase domain H_PPase PF03030.16 ORF40201 - 3.2e-46 158.3 0.6 3.6e-46 158.1 0.6 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase LacY_symp PF01306.19 ORF40201 - 0.055 12.2 0.3 0.075 11.8 0.3 1.2 1 0 0 1 1 1 0 LacY proton/sugar symporter DJ-1_PfpI PF01965.24 ORF39058 - 0.00098 19.0 0.0 0.001 18.9 0.0 1.3 1 1 0 1 1 1 1 DJ-1/PfpI family 5_nucleotid_C PF02872.18 ORF38963 - 0.13 12.5 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 5'-nucleotidase, C-terminal domain LMBR1 PF04791.16 ORF38963 - 2.1 7.2 5.5 2.2 7.1 5.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein LpxB PF02684.15 ORF3864 - 0.0068 15.3 0.0 0.0087 14.9 0.0 1.1 1 0 0 1 1 1 1 Lipid-A-disaccharide synthetase MORN PF02493.20 ORF37398 - 9.7e-22 75.5 37.8 1.6e-05 24.5 1.5 6.1 6 0 0 6 6 6 6 MORN repeat Gln-synt_C-ter PF18318.1 ORF37398 - 0.0051 16.7 0.3 0.0051 16.7 0.3 1.9 2 0 0 2 2 2 1 Glutamine synthetase C-terminal domain Tudor_2 PF18104.1 ORF37398 - 1.7 8.4 8.2 2.3 7.9 0.5 3.6 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain Shisa PF13908.6 ORF3721 - 0.0012 19.2 2.0 0.0013 19.0 2.0 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Phage_holin_3_6 PF07332.11 ORF3721 - 0.013 15.5 9.6 0.019 15.0 9.6 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF1700 PF08006.11 ORF3721 - 0.041 13.4 4.6 0.043 13.3 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Amnionless PF14828.6 ORF3721 - 0.2 10.5 2.5 0.24 10.2 2.5 1.2 1 0 0 1 1 1 0 Amnionless DUF4349 PF14257.6 ORF3721 - 0.25 10.8 6.6 0.34 10.3 6.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF2207 PF09972.9 ORF3721 - 0.34 9.6 1.7 0.35 9.6 1.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Hanta_G2 PF01561.16 ORF3721 - 0.56 8.8 3.1 0.82 8.2 3.1 1.3 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 VirB3 PF05101.13 ORF3721 - 6.2 7.1 9.4 10 6.4 9.4 1.3 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF1360 PF07098.11 ORF36962 - 0.046 13.7 0.0 0.064 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) FCD PF07729.12 ORF36922 - 1.1e-20 74.3 3.5 1.4e-20 74.0 3.5 1.1 1 0 0 1 1 1 1 FCD domain Imm49 PF15575.6 ORF36922 - 4.9e-05 23.2 0.8 5.4e-05 23.1 0.8 1.2 1 0 0 1 1 1 1 Immunity protein 49 THP2 PF09432.10 ORF36922 - 0.038 14.1 0.7 2.4 8.2 0.1 2.1 1 1 1 2 2 2 0 Tho complex subunit THP2 FliT PF05400.13 ORF36922 - 0.056 14.3 2.3 0.62 10.9 1.8 2.2 1 1 0 1 1 1 0 Flagellar protein FliT DUF1825 PF08855.10 ORF36922 - 0.072 13.0 1.4 0.083 12.8 0.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1825) FadR_C PF07840.12 ORF36922 - 0.079 12.9 0.1 0.092 12.6 0.1 1.1 1 0 0 1 1 1 0 FadR C-terminal domain PAXX PF15384.6 ORF34980 - 0.82 9.3 3.0 0.42 10.3 0.6 1.8 1 1 1 2 2 2 0 PAXX, PAralog of XRCC4 and XLF, also called C9orf142 Vpu PF00558.19 ORF34847 - 0.0087 15.8 0.0 0.0087 15.8 0.0 1.6 2 0 0 2 2 2 1 Vpu protein FeoB_associated PF12669.7 ORF34847 - 0.018 15.5 2.9 0.035 14.5 2.9 1.5 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein DUF2207 PF09972.9 ORF34847 - 0.019 13.8 0.9 0.021 13.6 0.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4381 PF14316.6 ORF34847 - 0.062 13.5 0.1 0.08 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) EphA2_TM PF14575.6 ORF34847 - 0.1 13.5 0.0 0.13 13.2 0.0 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF5305 PF17231.2 ORF34847 - 0.11 11.8 0.3 0.14 11.5 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Phage_holin_2_1 PF04971.12 ORF34847 - 0.2 11.7 2.9 0.36 10.9 2.9 1.4 1 0 0 1 1 1 0 Bacteriophage P21 holin S DUF3149 PF11346.8 ORF34847 - 0.24 11.1 6.6 0.53 10.0 3.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) Baculo_F PF12259.8 ORF34847 - 0.3 9.6 3.6 0.35 9.3 3.6 1.0 1 0 0 1 1 1 0 Baculovirus F protein RIFIN PF02009.16 ORF34847 - 0.98 9.2 5.1 1.2 8.9 5.1 1.1 1 0 0 1 1 1 0 Rifin SKG6 PF08693.10 ORF34847 - 9.6 5.7 10.1 18 4.9 10.1 1.4 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Adipogenin PF15202.6 ORF34322 - 0.15 12.1 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Adipogenin DNA_RNApol_7kD PF03604.13 ORF33489 - 0.14 11.8 0.4 0.14 11.8 0.4 1.7 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Activator_LAG-3 PF11498.8 ORF33444 - 0.018 14.0 0.9 0.023 13.7 0.5 1.3 1 1 0 1 1 1 0 Transcriptional activator LAG-3 JmjN PF02375.17 ORF33444 - 0.089 12.8 0.1 0.28 11.2 0.1 1.8 2 0 0 2 2 2 0 jmjN domain DNA_RNApol_7kD PF03604.13 ORF32636 - 0.14 11.8 0.4 0.14 11.8 0.4 1.7 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Ndr PF03096.14 ORF3237 - 0.066 11.9 0.1 0.079 11.7 0.1 1.1 1 0 0 1 1 1 0 Ndr family Tocopherol_cycl PF14249.6 ORF3237 - 0.093 11.8 0.4 0.11 11.6 0.4 1.0 1 0 0 1 1 1 0 Tocopherol cyclase DUF454 PF04304.13 ORF31560 - 4.6e-41 139.5 16.6 5.2e-41 139.3 16.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF454) Amelin PF05111.12 ORF31222 - 0.69 9.0 6.7 0.75 8.9 6.7 1.0 1 0 0 1 1 1 0 Ameloblastin precursor (Amelin) Ank_4 PF13637.6 ORF30864 - 1.4e-08 35.1 0.0 3.5e-08 33.8 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF30864 - 8.6e-06 26.3 0.1 2.7e-05 24.7 0.1 1.8 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) ubiquitin PF00240.23 ORF30864 - 0.00014 21.5 0.0 0.00027 20.6 0.0 1.5 2 0 0 2 2 2 1 Ubiquitin family Ank_5 PF13857.6 ORF30864 - 0.0022 18.3 0.4 0.13 12.6 0.1 2.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) DUF3597 PF12200.8 ORF30864 - 0.013 16.0 0.0 0.015 15.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3597) DUF1707 PF08044.11 ORF30864 - 0.1 12.7 0.3 0.1 12.7 0.3 2.1 3 0 0 3 3 3 0 Domain of unknown function (DUF1707) RPAP2_Rtr1 PF04181.13 ORF30864 - 0.15 12.4 0.0 0.2 12.0 0.0 1.5 1 1 0 1 1 1 0 Rtr1/RPAP2 family AFG1_ATPase PF03969.16 ORF30039 - 4.1e-28 98.3 0.0 4.5e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 AFG1-like ATPase GBP_repeat PF02526.14 ORF30039 - 0.1 12.3 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Glycophorin-binding protein LSM PF01423.22 ORF2750 - 5.9e-13 48.3 0.2 8.1e-13 47.9 0.2 1.2 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 ORF2750 - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Hfq protein DAPDH_C PF16654.5 ORF27438 - 0.099 12.5 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Diaminopimelic acid dehydrogenase C-terminal domain NUDIX_4 PF14815.6 ORF26750 - 0.06 13.3 0.8 0.07 13.1 0.8 1.1 1 0 0 1 1 1 0 NUDIX domain Ank_2 PF12796.7 ORF26208 - 2.1e-19 69.9 1.2 1.1e-08 35.6 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF26208 - 4.7e-18 65.3 1.2 1e-10 41.9 0.2 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF26208 - 1.4e-14 52.7 0.2 0.00014 22.0 0.0 4.1 4 0 0 4 4 4 4 Ankyrin repeat Ank PF00023.30 ORF26208 - 2.4e-13 49.9 3.3 1.4e-05 25.3 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF26208 - 1.4e-12 47.6 4.2 4.9e-09 36.3 0.3 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) MORN PF02493.20 ORF25447 - 6.1e-08 32.1 8.6 0.025 14.4 0.4 5.2 4 1 0 4 4 4 3 MORN repeat MORN_2 PF07661.13 ORF25447 - 0.23 11.8 4.5 5.8 7.5 0.0 3.3 4 0 0 4 4 4 0 MORN repeat variant SNCAIP_SNCA_bd PF16700.5 ORF25048 - 0.046 13.5 0.2 7.7 6.3 0.0 2.5 2 0 0 2 2 2 0 Synphilin-1 alpha-Synuclein-binding domain Fer4_22 PF17179.4 ORF25048 - 0.42 11.5 2.6 0.9 10.4 0.4 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain VEGFR-2_TMD PF17988.1 ORF24678 - 3.8 7.0 7.4 4.9 6.7 6.3 1.8 1 1 0 1 1 1 0 VEGFR-2 Transmembrane domain p31comet PF06581.12 ORF24240 - 0.073 12.2 0.0 0.08 12.1 0.0 1.1 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding ADH_zinc_N PF00107.26 ORF23981 - 3.3e-12 46.5 0.0 3.5e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase CDC4_D PF16856.5 ORF23981 - 0.045 13.6 0.5 4.6 7.2 0.2 2.4 2 0 0 2 2 2 0 Cell division control protein 4 dimerisation domain UPF0552 PF10574.9 ORF23748 - 0.014 14.8 0.9 0.015 14.6 0.9 1.2 1 0 0 1 1 1 0 Arp2/3-interacting proteins Arpin CHASE6_C PF17150.4 ORF23748 - 0.13 13.0 2.6 0.15 12.7 1.4 1.9 1 1 1 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain Peptidase_S49_N PF08496.10 ORF23748 - 0.41 10.7 6.2 0.5 10.4 6.2 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal CLN3 PF02487.17 ORF23748 - 0.66 9.0 2.8 0.78 8.7 2.8 1.0 1 0 0 1 1 1 0 CLN3 protein Ion_trans PF00520.31 ORF22883 - 4.6e-22 78.5 4.4 5.3e-22 78.2 4.4 1.0 1 0 0 1 1 1 1 Ion transport protein Exo_endo_phos PF03372.23 ORF18957 - 0.036 13.6 0.0 0.046 13.2 0.0 1.2 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family DJ-1_PfpI PF01965.24 ORF18828 - 1.3e-21 77.2 0.0 1.4e-21 77.0 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family FlaC_arch PF05377.11 ORF17149 - 0.16 12.4 0.2 2 8.9 0.0 2.3 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) HTH_52 PF18576.1 ORF17044 - 3.2 8.0 5.7 5 7.4 0.6 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain PRMT5_C PF17286.2 ORF16803 - 3.9e-36 124.6 3.4 4.6e-36 124.3 3.4 1.1 1 0 0 1 1 1 1 PRMT5 oligomerisation domain DUF5133 PF17196.4 ORF16803 - 0.14 12.4 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF5133) AFG1_ATPase PF03969.16 ORF14191 - 4.1e-28 98.3 0.0 4.5e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 AFG1-like ATPase GBP_repeat PF02526.14 ORF14191 - 0.1 12.3 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Glycophorin-binding protein Membralin PF09746.9 ORF11979 - 0.15 11.0 2.0 0.19 10.7 2.0 1.1 1 0 0 1 1 1 0 Tumour-associated protein ArfGap PF01412.18 ORF11979 - 0.77 9.8 4.8 0.97 9.5 4.4 1.4 1 1 0 1 1 1 0 Putative GTPase activating protein for Arf Ribosomal_S15 PF00312.22 ORF11905 - 0.15 12.3 0.4 0.24 11.7 0.4 1.3 1 0 0 1 1 1 0 Ribosomal protein S15 Shal-type PF11601.8 ORF11885 - 0.13 11.8 0.2 0.26 10.8 0.2 1.5 1 0 0 1 1 1 0 Shal-type voltage-gated potassium channels, N-terminal adh_short_C2 PF13561.6 ORF11866 - 9.1e-17 61.4 0.2 3.3e-10 39.9 0.1 2.0 1 1 1 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF11866 - 0.011 15.3 0.0 0.019 14.5 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase PgaD PF13994.6 ORF11566 - 0.054 13.5 0.0 0.065 13.3 0.0 1.1 1 0 0 1 1 1 0 PgaD-like protein Radial_spoke PF04712.12 ORF11422 - 0.12 11.3 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 Radial spokehead-like protein RIIa PF02197.17 ORF11422 - 0.13 11.9 0.0 0.26 11.0 0.0 1.5 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit DUF190 PF02641.15 ORF11413 - 0.19 12.0 0.4 0.44 10.9 0.3 1.6 1 1 1 2 2 2 0 Uncharacterized ACR, COG1993 Ank_2 PF12796.7 ORF11256 - 1e-24 86.9 0.2 3.9e-18 65.8 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF11256 - 1.9e-19 69.4 0.8 1.4e-07 31.6 0.1 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF11256 - 2.4e-16 59.8 0.1 1.7e-08 34.8 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF11256 - 2.4e-14 53.1 0.4 0.0058 17.0 0.0 3.9 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF11256 - 2e-13 49.2 0.1 0.043 14.4 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat RCC1_2 PF13540.6 ORF11247 - 1.3e-09 37.6 1.0 3.1e-09 36.4 1.0 1.7 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat CDC24_OB3 PF17244.2 ORF11247 - 0.098 12.4 3.1 0.11 12.2 3.1 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 XRCC1_N PF01834.16 ORF111716 - 0.0022 18.0 0.0 0.0028 17.7 0.0 1.2 1 0 0 1 1 1 1 XRCC1 N terminal domain F5_F8_type_C PF00754.25 ORF111716 - 0.0058 16.8 0.0 0.0063 16.6 0.0 1.2 1 1 0 1 1 1 1 F5/8 type C domain DUF5062 PF16691.5 ORF111649 - 0.043 14.0 0.0 0.059 13.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5062) Glu-tRNAGln PF02686.15 ORF111649 - 0.22 11.8 0.1 0.22 11.8 0.1 2.0 2 0 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit M16C_assoc PF08367.11 ORF111649 - 1.6 7.8 6.9 62 2.6 7.9 2.0 2 0 0 2 2 2 0 Peptidase M16C associated Ribosomal_S11 PF00411.19 ORF110901 - 1.2e-41 141.5 1.0 1.4e-41 141.3 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 Rhomboid PF01694.22 ORF110402 - 0.00011 22.3 5.6 0.00013 22.0 5.6 1.2 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 ORF110402 - 0.0014 19.2 9.3 0.0023 18.5 9.2 1.4 1 1 0 1 1 1 1 Eukaryotic integral membrane protein (DUF1751) DER1 PF04511.15 ORF110402 - 0.0051 16.8 7.5 0.0067 16.4 7.5 1.3 1 0 0 1 1 1 1 Der1-like family MARVEL PF01284.23 ORF110402 - 0.52 10.3 8.8 1.2 9.2 8.8 1.6 1 1 1 2 2 2 0 Membrane-associating domain Arm PF00514.23 ORF109936 - 0.001 19.1 2.4 0.0065 16.5 0.1 2.7 2 1 0 3 3 3 1 Armadillo/beta-catenin-like repeat DUF3636 PF12331.8 ORF109936 - 0.026 14.4 0.4 0.049 13.5 0.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3636) Mg_trans_NIPA PF05653.14 ORF108930 - 9.7e-11 41.3 1.9 1e-10 41.2 1.9 1.0 1 0 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 ORF108930 - 0.00038 20.6 6.1 0.0016 18.6 2.3 2.1 2 0 0 2 2 2 1 EamA-like transporter family DctQ PF04290.12 ORF108930 - 0.0015 18.4 0.4 0.002 18.0 0.4 1.2 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporters, DctQ component Oxidored_q2 PF00420.24 ORF108930 - 0.097 12.3 4.2 0.15 11.7 4.0 1.4 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Band_7_C PF16200.5 ORF108882 - 7.2e-24 83.6 0.5 1.3e-23 82.8 0.5 1.4 1 0 0 1 1 1 1 C-terminal region of band_7 DivIVA PF05103.13 ORF108882 - 0.07 13.2 1.4 0.1 12.7 1.4 1.3 1 0 0 1 1 1 0 DivIVA protein Flot PF15975.5 ORF108882 - 0.22 11.7 7.4 0.36 11.0 7.4 1.5 1 1 0 1 1 1 0 Flotillin TssN PF17555.2 ORF1075 - 0.078 12.3 1.0 0.09 12.2 1.0 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN Oxidored-like PF09791.9 ORF107054 - 5.4 6.8 8.4 12 5.7 1.0 2.5 2 0 0 2 2 2 0 Oxidoreductase-like protein, N-terminal ERGIC_N PF13850.6 ORF106985 - 0.029 14.7 0.6 0.037 14.4 0.6 1.4 1 1 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Transposase_22 PF02994.14 ORF106648 - 0.54 10.5 5.0 0.19 11.9 1.9 1.8 2 1 0 2 2 2 0 L1 transposable element RBD-like domain SIR2 PF02146.17 ORF106648 - 0.72 9.8 6.7 0.58 10.1 2.3 2.0 1 1 1 2 2 2 0 Sir2 family CitMHS PF03600.16 ORF105438 - 0.29 10.3 2.0 0.31 10.2 2.0 1.0 1 0 0 1 1 1 0 Citrate transporter Augurin PF15187.6 ORF105375 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF105375 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin Rrf2 PF02082.20 ORF104947 - 5.2e-17 62.0 0.2 8.4e-17 61.3 0.2 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_27 PF13463.6 ORF104947 - 0.00013 22.4 0.0 0.00042 20.7 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 ORF104947 - 0.01 15.7 0.1 0.038 13.9 0.0 2.0 3 0 0 3 3 3 0 MarR family TrmB PF01978.19 ORF104947 - 0.011 15.6 0.5 0.05 13.5 0.1 2.1 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB GntR PF00392.21 ORF104947 - 0.032 13.9 0.0 0.063 12.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 ORF104947 - 0.035 14.1 0.0 0.079 13.0 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_36 PF13730.6 ORF104947 - 0.055 13.4 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain SgrR_N PF12793.7 ORF104947 - 0.066 13.4 0.0 0.15 12.3 0.0 1.6 2 0 0 2 2 2 0 Sugar transport-related sRNA regulator N-term Sulfatase PF00884.23 ORF104947 - 0.19 11.1 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Sulfatase LHC PF00556.20 ORF104397 - 0.15 12.3 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 Antenna complex alpha/beta subunit FerA PF08165.11 ORF103319 - 0.15 12.1 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 FerA (NUC095) domain ubiquitin PF00240.23 ORF102945 - 7.3e-06 25.6 0.0 1.1e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family FAM83 PF07894.12 ORF102945 - 0.1 12.1 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 FAM83 A-H HlyE PF06109.13 ORF102791 - 0.067 12.5 1.1 0.09 12.1 0.2 1.5 1 1 1 2 2 2 0 Haemolysin E (HlyE) DUF676 PF05057.14 ORF102715 - 9.3e-16 58.0 0.0 1.1e-15 57.7 0.0 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF102715 - 0.16 11.7 0.0 0.26 11.1 0.0 1.2 1 1 0 1 1 1 0 Palmitoyl protein thioesterase TPR_1 PF00515.28 ORF102315 - 7e-07 28.8 2.0 7.9e-06 25.5 1.6 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF102315 - 2.1e-06 27.4 0.4 3.1e-05 23.7 1.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF102315 - 0.00052 20.0 1.4 0.0018 18.4 0.9 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF357 PF04010.13 ORF102315 - 0.001 19.1 0.3 0.0021 18.1 0.3 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF357) TPR_17 PF13431.6 ORF102315 - 0.012 15.9 0.6 0.027 14.8 0.1 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF102315 - 0.057 13.5 0.0 12 6.2 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Defensin_5 PF18251.1 ORF102139 - 0.21 11.7 1.6 0.36 10.9 1.6 1.3 1 0 0 1 1 1 0 Fungal defensin Copsin BLOC1S3 PF15753.5 ORF101561 - 2.6 8.1 9.3 1.6 8.8 1.2 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 DUF4618 PF15397.6 ORF100646 - 0.0082 15.6 3.6 0.009 15.5 3.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) DUF4349 PF14257.6 ORF100646 - 0.022 14.2 3.2 0.026 14.0 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) bZIP_Maf PF03131.17 ORF100646 - 0.031 14.8 1.4 0.031 14.8 1.4 1.7 2 0 0 2 2 2 0 bZIP Maf transcription factor DUF4472 PF14739.6 ORF100646 - 0.035 14.9 5.4 0.045 14.5 5.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4472) CENP-F_leu_zip PF10473.9 ORF100646 - 0.062 13.3 7.7 0.098 12.7 7.6 1.6 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.11 ORF100646 - 0.073 11.9 6.1 0.091 11.6 6.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DivIC PF04977.15 ORF100646 - 0.076 12.8 5.1 0.05 13.4 1.4 2.3 1 1 1 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF100646 - 0.084 13.1 7.1 0.076 13.3 5.0 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain CENP-H PF05837.12 ORF100646 - 0.26 11.7 6.9 0.39 11.2 6.7 1.5 1 1 0 1 1 1 0 Centromere protein H (CENP-H) APG6_N PF17675.1 ORF100646 - 0.29 11.6 11.3 0.51 10.9 11.3 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region Bap31_Bap29_C PF18035.1 ORF100646 - 1.4 9.0 8.2 0.85 9.7 5.3 2.2 2 1 1 3 3 3 0 Bap31/Bap29 cytoplasmic coiled-coil domain DUF4748 PF15932.5 NODE_50040_length_370_cov_2.038806_g42146_i0forward_frame_1 - 0.047 13.5 1.3 0.091 12.5 1.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) SAND PF01342.21 NODE_50027_length_370_cov_2.537313_g42133_i0forward_frame_1 - 0.093 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 SAND domain PspC PF04024.12 NODE_50027_length_370_cov_2.537313_g42133_i0forward_frame_1 - 0.77 9.6 4.8 1.2 9.0 4.8 1.3 1 0 0 1 1 1 0 PspC domain zf-RING_11 PF17123.5 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 0.074 12.8 0.5 0.22 11.3 0.1 2.0 2 0 0 2 2 2 0 RING-like zinc finger CRIC_ras_sig PF10534.9 NODE_49995_length_370_cov_76.701493_g42101_i0reverse_frame_1 - 9.5e-05 22.5 3.1 0.095 12.9 0.1 2.9 2 1 0 3 3 3 2 Connector enhancer of kinase suppressor of ras LCD1 PF09798.9 NODE_49995_length_370_cov_76.701493_g42101_i0reverse_frame_1 - 0.0018 16.9 0.1 0.0019 16.8 0.1 1.1 1 0 0 1 1 1 1 DNA damage checkpoint protein HATPase_c PF02518.26 NODE_49991_length_370_cov_92.611940_g42097_i0forward_frame_1 - 2.8e-05 24.6 0.0 4.5e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF5527 PF17665.1 NODE_49981_length_370_cov_154.710448_g42087_i0forward_frame_1 - 0.0047 16.5 0.0 0.0065 16.0 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5527) WCCH PF03716.14 NODE_49980_length_370_cov_186.898507_g42086_i0reverse_frame_1 - 1.1 9.0 6.5 2.3 8.0 6.5 1.5 1 0 0 1 1 1 0 WCCH motif zf-B_box PF00643.24 NODE_49963_length_371_cov_1.565476_g42069_i0reverse_frame_1 - 1.8e-05 24.8 4.0 3.7e-05 23.8 4.0 1.5 1 0 0 1 1 1 1 B-box zinc finger zf-C2H2_7 PF15269.6 NODE_49956_length_371_cov_2.104167_g42062_i0forward_frame_1 - 0.22 11.6 3.4 0.44 10.7 3.4 1.5 1 0 0 1 1 1 0 Zinc-finger DUF1518 PF07469.12 NODE_49955_length_371_cov_2.145833_g42061_i0reverse_frame_1 - 0.032 14.6 0.6 0.061 13.7 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1518) Arv1 PF04161.13 NODE_49954_length_371_cov_2.166667_g42060_i0forward_frame_1 - 0.0075 16.4 0.9 0.0075 16.4 0.9 1.4 1 1 0 1 1 1 1 Arv1-like family Mfp-3 PF04202.13 NODE_49952_length_371_cov_2.261905_g42058_i0reverse_frame_1 - 0.84 10.1 2.6 1.5 9.3 2.6 1.3 1 0 0 1 1 1 0 Foot protein 3 Toxin_9 PF02819.15 NODE_49951_length_371_cov_2.363095_g36386_i1reverse_frame_1 - 0.032 14.5 3.6 0.032 14.5 3.6 2.9 3 0 0 3 3 3 0 Spider toxin Chlam_PMP PF02415.17 NODE_49950_length_371_cov_2.369048_g42057_i0forward_frame_1 - 0.00081 19.7 19.1 0.011 16.2 6.3 4.8 4 1 0 4 4 4 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Arf PF00025.21 NODE_49927_length_371_cov_19.919643_g42034_i0reverse_frame_1 - 0.00096 18.6 0.0 0.001 18.6 0.0 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family Histone_H2A_C PF16211.5 NODE_49921_length_371_cov_43.142857_g42028_i0reverse_frame_1 - 5.4 6.9 6.0 11 5.8 6.0 1.5 1 0 0 1 1 1 0 C-terminus of histone H2A RCC1_2 PF13540.6 NODE_49918_length_371_cov_53.235119_g42025_i0reverse_frame_1 - 0.00014 21.5 0.5 0.036 13.9 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Bys1 PF04681.12 NODE_49918_length_371_cov_53.235119_g42025_i0reverse_frame_1 - 0.038 13.9 0.7 0.047 13.6 0.7 1.2 1 0 0 1 1 1 0 Blastomyces yeast-phase-specific protein UPF0524 PF15823.5 NODE_49916_length_371_cov_65.571429_g42023_i0forward_frame_1 - 0.35 10.3 2.6 0.37 10.2 2.6 1.1 1 0 0 1 1 1 0 UPF0524 of C3orf70 Atg8 PF02991.16 NODE_49913_length_371_cov_72.690476_g42020_i0forward_frame_1 - 4.3e-33 113.6 0.1 5.4e-33 113.3 0.1 1.1 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 NODE_49913_length_371_cov_72.690476_g42020_i0forward_frame_1 - 2.2e-05 24.8 0.0 2.7e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Tantalus PF15386.6 NODE_49913_length_371_cov_72.690476_g42020_i0forward_frame_1 - 0.23 11.6 0.1 0.23 11.6 0.1 2.2 2 0 0 2 2 2 0 Drosophila Tantalus-like Myotoxins PF00819.17 NODE_49909_length_371_cov_74.297619_g42016_i0reverse_frame_1 - 0.0061 16.8 1.0 0.0061 16.8 1.0 2.7 2 1 0 2 2 2 1 Myotoxin, crotamine Amidoligase_2 PF12224.8 NODE_49909_length_371_cov_74.297619_g42016_i0forward_frame_1 - 0.086 12.5 0.1 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 Putative amidoligase enzyme PARG_cat PF05028.14 NODE_49905_length_371_cov_78.014881_g42012_i0reverse_frame_1 - 0.025 13.9 1.0 0.027 13.8 1.0 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) PIP49_N PF14875.6 NODE_49905_length_371_cov_78.014881_g42012_i0reverse_frame_1 - 0.047 13.6 0.4 0.059 13.2 0.4 1.1 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 MSP7_C PF12948.7 NODE_49905_length_371_cov_78.014881_g42012_i0reverse_frame_1 - 0.082 13.6 6.3 0.3 11.7 6.3 1.8 1 1 0 1 1 1 0 MSP7-like protein C-terminal domain DUF5611 PF18446.1 NODE_49900_length_371_cov_92.687500_g42007_i0reverse_frame_1 - 0.022 15.6 0.1 0.029 15.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5611) Herpes_BMRF2 PF04633.12 NODE_49900_length_371_cov_92.687500_g42007_i0forward_frame_1 - 0.0029 16.9 0.1 0.0044 16.3 0.1 1.3 1 0 0 1 1 1 1 Herpesvirus BMRF2 protein Rep_3 PF01051.21 NODE_49900_length_371_cov_92.687500_g42007_i0forward_frame_1 - 0.018 14.9 0.1 0.019 14.8 0.1 1.1 1 0 0 1 1 1 0 Initiator Replication protein DUF1648 PF07853.11 NODE_49898_length_371_cov_103.613095_g42005_i0forward_frame_1 - 0.4 10.4 0.1 0.4 10.4 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1648) B-block_TFIIIC PF04182.12 NODE_49890_length_371_cov_198.755952_g41997_i0reverse_frame_1 - 0.067 13.4 1.0 13 6.1 0.0 2.9 3 0 0 3 3 3 0 B-block binding subunit of TFIIIC DUF3660 PF12398.8 NODE_49886_length_371_cov_239.684524_g41993_i0reverse_frame_1 - 0.11 12.6 0.1 0.29 11.2 0.1 1.7 1 0 0 1 1 1 0 Receptor serine/threonine kinase Herpes_BLLF1 PF05109.13 NODE_49884_length_371_cov_308.931548_g41991_i0reverse_frame_1 - 0.063 11.3 57.1 0.41 8.6 57.1 1.8 1 1 0 1 1 1 0 Herpes virus major outer envelope glycoprotein (BLLF1) Big_3_5 PF16640.5 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_1 - 0.18 12.0 14.2 7.1 6.9 7.9 3.0 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 3) YadA_head PF05658.14 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_1 - 1.1 9.7 42.4 7.1 7.2 3.5 8.8 4 1 4 8 8 8 0 Head domain of trimeric autotransporter adhesin zf-LITAF-like PF10601.9 NODE_49877_length_371_cov_6102.461310_g41984_i0reverse_frame_1 - 2.3e-12 47.0 20.6 3.3e-12 46.5 20.6 1.3 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF5401 PF17380.2 NODE_49877_length_371_cov_6102.461310_g41984_i0reverse_frame_1 - 0.053 11.6 0.5 0.062 11.4 0.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF3239 PF11580.8 NODE_49877_length_371_cov_6102.461310_g41984_i0reverse_frame_1 - 0.1 12.9 0.4 0.13 12.6 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3239) DEFB136 PF17333.2 NODE_49864_length_372_cov_2.023739_g41971_i0forward_frame_1 - 0.34 10.9 4.4 0.57 10.2 4.4 1.3 1 0 0 1 1 1 0 Beta defensin 136 DUF5543 PF17697.1 NODE_49861_length_372_cov_2.225519_g41968_i0forward_frame_1 - 0.045 14.0 0.3 0.059 13.7 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5543) FCD PF07729.12 NODE_49851_length_372_cov_2.893175_g41958_i0reverse_frame_1 - 6.4e-17 62.1 1.2 7.7e-17 61.9 1.2 1.1 1 0 0 1 1 1 1 FCD domain DUF4156 PF13698.6 NODE_49845_length_372_cov_3.311573_g41952_i0reverse_frame_1 - 3e-32 110.8 0.1 3.6e-32 110.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4156) Ntox11 PF15521.6 NODE_49845_length_372_cov_3.311573_g41952_i0forward_frame_1 - 0.021 14.4 0.0 0.025 14.2 0.0 1.0 1 0 0 1 1 1 0 Novel toxin 11 HCV_env PF01539.17 NODE_49845_length_372_cov_3.311573_g41952_i0forward_frame_1 - 0.024 14.3 0.7 0.028 14.1 0.7 1.2 1 0 0 1 1 1 0 Hepatitis C virus envelope glycoprotein E1 Usp PF00582.26 NODE_49841_length_372_cov_4.551929_g41948_i0forward_frame_1 - 2.7e-07 31.2 0.1 4e-07 30.6 0.1 1.3 1 0 0 1 1 1 1 Universal stress protein family Aconitase_B_N PF11791.8 NODE_49840_length_372_cov_4.762611_g41947_i0reverse_frame_1 - 3e-19 69.6 0.0 4.1e-19 69.2 0.0 1.2 1 0 0 1 1 1 1 Aconitate B N-terminal domain Glyco_transf_34 PF05637.12 NODE_49823_length_372_cov_84.068249_g41930_i0reverse_frame_1 - 9.2e-05 22.3 0.0 0.00013 21.7 0.0 1.1 1 0 0 1 1 1 1 galactosyl transferase GMA12/MNN10 family DUF4129 PF13559.6 NODE_49815_length_372_cov_153.504451_g41922_i0forward_frame_1 - 0.12 12.6 2.2 0.14 12.5 0.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4129) RP854 PF17460.2 NODE_49807_length_372_cov_318.575668_g41914_i0forward_frame_1 - 1.1 9.0 2.1 1.3 8.7 2.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein RP854 AdoHcyase PF05221.17 NODE_49799_length_372_cov_6383.513353_g41907_i0reverse_frame_1 - 7.3e-23 81.1 0.1 8.7e-23 80.9 0.1 1.1 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase DUF4709 PF15821.5 NODE_49796_length_373_cov_1.390533_g41904_i0reverse_frame_2 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4709) TMEM154 PF15102.6 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.014 15.3 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 TMEM154 protein family V_ATPase_I PF01496.19 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.024 12.6 0.0 0.033 12.1 0.0 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CD20 PF04103.15 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.032 14.3 0.0 0.039 14.0 0.0 1.2 1 0 0 1 1 1 0 CD20-like family Vpu PF00558.19 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.051 13.3 0.0 0.086 12.6 0.0 1.3 1 0 0 1 1 1 0 Vpu protein TMEM171 PF15471.6 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.063 12.3 0.0 0.078 12.0 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein family 171 UPF0242 PF06785.11 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.078 13.1 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FAM163 PF15069.6 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.081 13.4 1.3 0.1 13.0 0.5 1.5 1 1 1 2 2 2 0 FAM163 family Connexin PF00029.19 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.085 12.6 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Connexin UPF0239 PF06783.11 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.092 12.9 0.3 0.092 12.9 0.3 1.9 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0239) CSG2 PF16965.5 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.21 10.5 0.1 0.23 10.3 0.1 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator CLN3 PF02487.17 NODE_49796_length_373_cov_1.390533_g41904_i0forward_frame_3 - 0.21 10.6 0.1 0.39 9.7 0.1 1.4 1 1 0 1 1 1 0 CLN3 protein MS_channel PF00924.18 NODE_49788_length_373_cov_1.825444_g41896_i0reverse_frame_3 - 7.5e-12 45.2 6.6 1.4e-11 44.4 6.6 1.5 1 0 0 1 1 1 1 Mechanosensitive ion channel Spo7 PF03907.13 NODE_49788_length_373_cov_1.825444_g41896_i0reverse_frame_3 - 0.16 11.4 0.8 0.21 11.0 0.8 1.1 1 0 0 1 1 1 0 Spo7-like protein MatC_N PF07158.11 NODE_49788_length_373_cov_1.825444_g41896_i0reverse_frame_3 - 0.58 10.2 7.1 0.96 9.5 1.2 2.0 2 0 0 2 2 2 0 Dicarboxylate carrier protein MatC N-terminus dCMP_cyt_deam_1 PF00383.23 NODE_49788_length_373_cov_1.825444_g41896_i0forward_frame_3 - 0.13 12.2 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region RB_B PF01857.20 NODE_49788_length_373_cov_1.825444_g41896_i0forward_frame_3 - 0.17 11.9 1.7 0.52 10.4 0.1 2.0 1 1 1 2 2 2 0 Retinoblastoma-associated protein B domain ALG3 PF05208.13 NODE_49784_length_373_cov_1.920118_g41892_i0reverse_frame_3 - 0.15 11.5 1.6 0.17 11.3 1.6 1.0 1 0 0 1 1 1 0 ALG3 protein PRD_Mga PF08270.11 NODE_49779_length_373_cov_2.094675_g41887_i0forward_frame_3 - 0.006 16.3 2.9 0.007 16.1 2.9 1.1 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) PRD domain EF-hand_8 PF13833.6 NODE_49778_length_373_cov_2.198225_g41886_i0reverse_frame_3 - 8.5e-06 25.5 0.4 6.8e-05 22.6 0.2 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 NODE_49778_length_373_cov_2.198225_g41886_i0reverse_frame_3 - 4.7e-05 23.8 0.8 0.0001 22.7 0.6 1.6 1 1 1 2 2 2 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 NODE_49778_length_373_cov_2.198225_g41886_i0reverse_frame_3 - 0.00049 20.4 1.1 0.00062 20.1 1.1 1.2 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_1 PF00036.32 NODE_49778_length_373_cov_2.198225_g41886_i0reverse_frame_3 - 0.00082 18.8 0.1 0.0027 17.1 0.0 1.9 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_49778_length_373_cov_2.198225_g41886_i0reverse_frame_3 - 0.018 14.9 0.2 0.18 11.8 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain HTH_12 PF08461.10 NODE_49778_length_373_cov_2.198225_g41886_i0reverse_frame_3 - 0.046 13.7 0.0 0.08 12.9 0.0 1.4 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain EF-hand_5 PF13202.6 NODE_49778_length_373_cov_2.198225_g41886_i0reverse_frame_3 - 0.097 12.2 0.1 0.31 10.6 0.0 1.8 2 0 0 2 2 2 0 EF hand DUF1793 PF08760.11 NODE_49778_length_373_cov_2.198225_g41886_i0reverse_frame_3 - 0.16 12.4 0.0 0.18 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1793) MotB_plug PF13677.6 NODE_49775_length_373_cov_2.316568_g41883_i0forward_frame_2 - 0.16 11.6 0.1 0.33 10.6 0.0 1.5 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB DUF2070 PF09843.9 NODE_49772_length_373_cov_2.544379_g41880_i0forward_frame_3 - 0.36 9.0 4.6 0.39 8.9 4.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2207 PF09972.9 NODE_49772_length_373_cov_2.544379_g41880_i0forward_frame_3 - 5.5 5.6 5.2 6.6 5.4 5.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MatE PF01554.18 NODE_49768_length_373_cov_3.065089_g41876_i0forward_frame_3 - 3.2e-20 72.4 0.2 3.2e-20 72.4 0.2 1.6 2 0 0 2 2 2 1 MatE Polysacc_synt_C PF14667.6 NODE_49768_length_373_cov_3.065089_g41876_i0forward_frame_3 - 3.1e-08 33.8 4.6 3.4e-08 33.7 1.8 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis C-terminal domain DUF4012 PF13196.6 NODE_49767_length_373_cov_3.100592_g41875_i0reverse_frame_2 - 0.00072 20.0 3.6 0.42 11.1 1.0 2.6 1 1 1 2 2 2 2 Protein of unknown function (DUF4012) IHHNV_capsid PF16530.5 NODE_49767_length_373_cov_3.100592_g41875_i0reverse_frame_2 - 0.097 11.8 2.1 0.11 11.6 2.1 1.1 1 0 0 1 1 1 0 Infectious hypodermal and haematopoietic necrosis virus, capsid YolD PF08863.10 NODE_49767_length_373_cov_3.100592_g41875_i0reverse_frame_2 - 0.15 12.2 1.8 9.4 6.4 0.0 2.7 1 1 2 3 3 3 0 YolD-like protein YrzO PF14142.6 NODE_49763_length_373_cov_3.926036_g41871_i0reverse_frame_2 - 0.023 14.6 0.1 0.097 12.6 0.0 1.9 2 0 0 2 2 2 0 YrzO-like protein Ribosomal_L29e PF01779.17 NODE_49762_length_373_cov_4.124260_g41870_i0reverse_frame_3 - 0.029 14.7 0.3 0.29 11.5 0.1 2.5 2 0 0 2 2 2 0 Ribosomal L29e protein family ATG2_CAD PF13329.6 NODE_49762_length_373_cov_4.124260_g41870_i0reverse_frame_3 - 0.05 13.3 0.5 0.067 12.9 0.5 1.2 1 0 0 1 1 1 0 Autophagy-related protein 2 CAD motif Borealin PF10512.9 NODE_49757_length_373_cov_13.434911_g41865_i0reverse_frame_3 - 0.19 11.7 0.6 0.25 11.3 0.6 1.2 1 0 0 1 1 1 0 Cell division cycle-associated protein 8 Vinculin PF01044.19 NODE_49757_length_373_cov_13.434911_g41865_i0reverse_frame_3 - 0.25 9.5 0.1 0.3 9.3 0.1 1.0 1 0 0 1 1 1 0 Vinculin family Synaptobrevin PF00957.21 NODE_49753_length_373_cov_50.360947_g41861_i0forward_frame_3 - 0.0018 18.0 0.1 0.0028 17.4 0.1 1.3 1 0 0 1 1 1 1 Synaptobrevin TMEM154 PF15102.6 NODE_49753_length_373_cov_50.360947_g41861_i0forward_frame_3 - 0.017 15.0 0.5 0.023 14.6 0.5 1.3 1 0 0 1 1 1 0 TMEM154 protein family BIV_Env PF05858.12 NODE_49753_length_373_cov_50.360947_g41861_i0forward_frame_3 - 0.02 13.1 0.1 0.023 12.9 0.1 1.1 1 0 0 1 1 1 0 Bovine immunodeficiency virus surface protein (SU) BPS PF08947.10 NODE_49751_length_373_cov_63.210059_g41859_i0reverse_frame_3 - 0.41 10.5 0.0 0.41 10.5 0.0 2.0 3 0 0 3 3 3 0 BPS (Between PH and SH2) OSTMP1 PF09777.9 NODE_49751_length_373_cov_63.210059_g41859_i0forward_frame_2 - 0.043 13.2 0.1 0.062 12.7 0.1 1.3 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor CLZ PF16526.5 NODE_49746_length_373_cov_68.494083_g41854_i0forward_frame_2 - 0.074 13.4 0.1 0.15 12.4 0.1 1.5 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Mesd PF10185.9 NODE_49735_length_373_cov_83.582840_g41843_i0forward_frame_2 - 0.0014 18.6 0.0 0.0014 18.6 0.0 1.1 1 0 0 1 1 1 1 Chaperone for wingless signalling and trafficking of LDL receptor Porin_7 PF16956.5 NODE_49731_length_373_cov_90.772189_g41839_i0forward_frame_3 - 0.12 12.0 1.4 0.17 11.5 1.4 1.2 1 0 0 1 1 1 0 Putative general bacterial porin Not1 PF04054.15 NODE_49731_length_373_cov_90.772189_g41839_i0forward_frame_2 - 0.032 13.2 1.6 0.038 12.9 1.6 1.0 1 0 0 1 1 1 0 CCR4-Not complex component, Not1 Rpn3_C PF08375.11 NODE_49726_length_373_cov_112.488166_g41834_i0reverse_frame_2 - 0.26 11.7 0.0 0.38 11.2 0.0 1.2 1 0 0 1 1 1 0 Proteasome regulatory subunit C-terminal DUF5389 PF17364.2 NODE_49723_length_373_cov_114.292899_g41831_i0reverse_frame_3 - 2.1 8.4 5.2 15 5.7 0.3 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5389) DUF2892 PF11127.8 NODE_49723_length_373_cov_114.292899_g41831_i0forward_frame_2 - 0.12 12.4 5.0 2.3 8.3 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) KASH PF10541.9 NODE_49723_length_373_cov_114.292899_g41831_i0forward_frame_2 - 0.74 10.1 5.0 10 6.5 1.9 3.0 1 1 1 2 2 2 0 Nuclear envelope localisation domain FGFR3_TM PF18123.1 NODE_49723_length_373_cov_114.292899_g41831_i0forward_frame_2 - 3.4 7.3 7.9 2.2 7.9 2.5 2.3 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain MDM31_MDM32 PF08118.11 NODE_49718_length_373_cov_197.967456_g41826_i0reverse_frame_3 - 0.012 14.4 0.4 0.014 14.1 0.4 1.0 1 0 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins DUF805 PF05656.14 NODE_49717_length_373_cov_219.142012_g41825_i0reverse_frame_2 - 0.58 10.6 3.5 0.83 10.1 3.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF805) Baculo_11_kDa PF06143.11 NODE_49717_length_373_cov_219.142012_g41825_i0reverse_frame_2 - 0.59 9.7 2.6 6.9 6.3 0.0 2.3 2 1 0 2 2 2 0 Baculovirus 11 kDa family VDE PF07137.11 NODE_49717_length_373_cov_219.142012_g41825_i0forward_frame_2 - 0.016 14.7 0.7 0.016 14.7 0.7 1.5 1 1 1 2 2 2 0 VDE lipocalin domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks186.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks186.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks186.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks186.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MNSV_P7B PF06692.11 NODE_49708_length_374_cov_1.687316_g41817_i0forward_frame_2 - 0.6 10.1 3.8 4.8 7.3 0.1 2.5 2 1 0 2 2 2 0 Melon necrotic spot virus P7B protein CBP_BcsF PF11120.8 NODE_49707_length_374_cov_1.702065_g41816_i0reverse_frame_3 - 0.064 13.4 1.1 0.064 13.4 1.1 2.2 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsF CobU PF02283.16 NODE_49707_length_374_cov_1.702065_g41816_i0reverse_frame_2 - 6.7e-36 123.4 0.1 7.3e-36 123.3 0.1 1.0 1 0 0 1 1 1 1 Cobinamide kinase / cobinamide phosphate guanyltransferase ATG16 PF08614.11 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.00013 22.3 10.7 0.00019 21.7 10.7 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF4201 PF13870.6 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.00054 19.7 10.3 0.00075 19.3 10.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) bZIP_1 PF00170.21 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.0016 18.5 8.7 0.027 14.6 0.5 2.7 1 1 1 3 3 3 2 bZIP transcription factor DivIC PF04977.15 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.014 15.2 10.2 0.063 13.1 2.7 2.2 1 1 1 2 2 2 0 Septum formation initiator MPS2 PF17060.5 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.025 13.9 5.3 0.026 13.8 5.3 1.1 1 0 0 1 1 1 0 Monopolar spindle protein 2 FliS_cochap PF16522.5 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.026 14.5 4.7 0.027 14.4 4.7 1.1 1 0 0 1 1 1 0 Flagellar FLiS export co-chaperone, HP1076 TolA_bind_tri PF16331.5 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.037 14.1 9.1 0.26 11.4 0.2 2.4 1 1 1 2 2 2 0 TolA binding protein trimerisation HAP1_N PF04849.13 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.041 13.1 14.1 0.14 11.4 14.1 1.8 1 1 0 1 1 1 0 HAP1 N-terminal conserved region TSC22 PF01166.18 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.058 13.7 10.8 3.4 8.0 7.5 3.0 1 1 0 2 2 2 0 TSC-22/dip/bun family TMF_DNA_bd PF12329.8 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.19 11.8 12.5 0.25 11.4 11.9 1.5 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding NRBF2 PF08961.10 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.24 11.0 7.7 0.078 12.6 1.9 2.1 1 1 1 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator Csm1_N PF18504.1 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.29 11.5 10.0 0.79 10.1 3.6 2.5 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF1664 PF07889.12 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.46 10.5 4.3 0.65 10.0 4.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) BST2 PF16716.5 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.46 11.1 10.6 0.35 11.5 8.8 1.8 2 1 0 2 2 1 0 Bone marrow stromal antigen 2 SlyX PF04102.12 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.55 10.9 7.3 0.68 10.6 5.5 2.2 1 1 1 2 2 2 0 SlyX KLRAQ PF10205.9 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 0.57 10.4 11.5 4.1 7.7 2.2 2.2 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein ZapB PF06005.12 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 1.6 9.3 16.3 4.4 7.8 5.3 2.9 1 1 1 2 2 2 0 Cell division protein ZapB DUF4795 PF16043.5 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 2.3 7.8 12.1 4.5 6.8 0.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) bZIP_2 PF07716.15 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 2.5 8.3 8.4 0.64 10.1 1.2 2.6 2 1 0 2 2 2 0 Basic region leucine zipper YabA PF06156.13 NODE_49706_length_374_cov_1.705015_g41815_i0forward_frame_3 - 7.6 7.2 12.6 5.5 7.7 5.3 2.2 1 1 1 2 2 2 0 Initiation control protein YabA POR_N PF01855.19 NODE_49703_length_374_cov_1.926254_g41812_i0forward_frame_2 - 3.8e-38 131.5 0.3 4.1e-38 131.4 0.3 1.0 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PA-IL PF07828.12 NODE_49703_length_374_cov_1.926254_g41812_i0forward_frame_2 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 PA-IL-like protein zf-C3HC4 PF00097.25 NODE_49700_length_374_cov_2.221239_g41809_i0forward_frame_2 - 0.24 11.3 2.7 12 5.9 0.5 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_49700_length_374_cov_2.221239_g41809_i0forward_frame_2 - 0.39 10.7 3.3 2.1 8.4 0.7 2.2 2 0 0 2 2 2 0 zinc-RING finger domain Med25 PF11232.8 NODE_49698_length_374_cov_2.327434_g41807_i0reverse_frame_2 - 0.1 12.6 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 CDC45 PF02724.14 NODE_49698_length_374_cov_2.327434_g41807_i0reverse_frame_2 - 0.86 7.8 8.3 0.85 7.8 8.3 1.1 1 0 0 1 1 1 0 CDC45-like protein AAA_11 PF13086.6 NODE_49698_length_374_cov_2.327434_g41807_i0reverse_frame_2 - 6.9 6.4 9.4 8.7 6.0 9.4 1.2 1 0 0 1 1 1 0 AAA domain ATP-synt_Eps PF04627.13 NODE_49698_length_374_cov_2.327434_g41807_i0forward_frame_3 - 2.2 8.3 6.4 1.3 9.1 2.2 2.4 1 1 1 2 2 2 0 Mitochondrial ATP synthase epsilon chain Anoctamin PF04547.12 NODE_49696_length_374_cov_2.374631_g41805_i0forward_frame_2 - 9e-07 28.1 2.9 9.8e-07 28.0 2.9 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel 7TM_GPCR_Srv PF10323.9 NODE_49696_length_374_cov_2.374631_g41805_i0forward_frame_2 - 0.007 15.8 1.0 0.0073 15.7 1.0 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srv NT-C2 PF10358.9 NODE_49694_length_374_cov_2.451327_g41803_i0reverse_frame_3 - 0.035 13.8 0.3 0.04 13.6 0.3 1.1 1 0 0 1 1 1 0 N-terminal C2 in EEIG1 and EHBP1 proteins Spore_GerQ PF09671.10 NODE_49690_length_374_cov_2.693215_g41799_i0reverse_frame_2 - 0.00022 21.2 0.3 0.00047 20.1 0.3 1.6 1 1 0 1 1 1 1 Spore coat protein (Spore_GerQ) CoA_binding_3 PF13727.6 NODE_49690_length_374_cov_2.693215_g41799_i0forward_frame_3 - 0.097 12.7 1.4 0.11 12.5 1.4 1.2 1 0 0 1 1 1 0 CoA-binding domain AKAP2_C PF15304.6 NODE_49688_length_374_cov_2.849558_g41797_i0forward_frame_2 - 0.0041 16.5 0.0 0.0053 16.1 0.0 1.2 1 0 0 1 1 1 1 A-kinase anchor protein 2 C-terminus Conotoxin_I2 PF17557.2 NODE_49685_length_374_cov_3.427729_g41794_i0reverse_frame_3 - 0.061 13.4 2.1 0.13 12.4 2.1 1.5 1 0 0 1 1 1 0 I2-superfamily conotoxins Ins_allergen_rp PF06757.13 NODE_49682_length_374_cov_6.899705_g41791_i0forward_frame_3 - 0.11 12.5 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Insect allergen related repeat, nitrile-specifier detoxification Dna2 PF08696.11 NODE_49677_length_374_cov_25.628319_g41786_i0forward_frame_3 - 0.5 10.1 7.8 0.76 9.6 7.7 1.3 1 1 0 1 1 1 0 DNA replication factor Dna2 DUF2151 PF10221.9 NODE_49677_length_374_cov_25.628319_g41786_i0forward_frame_2 - 0.71 8.4 6.2 0.79 8.2 6.2 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator Vac7 PF12751.7 NODE_49677_length_374_cov_25.628319_g41786_i0forward_frame_2 - 5.1 6.4 10.0 10 5.5 10.0 1.5 1 1 0 1 1 1 0 Vacuolar segregation subunit 7 DUF4834 PF16118.5 NODE_49674_length_374_cov_46.247788_g41783_i0forward_frame_2 - 3.4 8.7 7.4 2 9.4 5.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) MIF4G PF02854.19 NODE_49673_length_374_cov_49.598820_g41782_i0forward_frame_2 - 0.082 12.5 0.4 0.098 12.3 0.4 1.2 1 0 0 1 1 1 0 MIF4G domain DUF4407 PF14362.6 NODE_49672_length_374_cov_52.528024_g41781_i0reverse_frame_3 - 2.3 7.5 6.3 2.6 7.3 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) OmpH PF03938.14 NODE_49672_length_374_cov_52.528024_g41781_i0reverse_frame_3 - 6.4 7.1 15.3 0.3 11.4 6.4 2.1 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) CBM_10 PF02013.16 NODE_49670_length_374_cov_57.088496_g41779_i0reverse_frame_3 - 0.58 10.7 3.4 0.87 10.1 3.4 1.3 1 0 0 1 1 1 0 Cellulose or protein binding domain SUR7 PF06687.12 NODE_49669_length_374_cov_59.542773_g41778_i0reverse_frame_2 - 4.8 6.7 12.7 9.2 5.8 12.0 1.7 1 1 0 1 1 1 0 SUR7/PalI family S19 PF06756.11 NODE_49664_length_374_cov_74.174041_g41773_i0reverse_frame_3 - 0.05 13.6 0.2 0.11 12.5 0.1 1.5 1 1 0 1 1 1 0 Chorion protein S19 C-terminal UL141 PF16758.5 NODE_49664_length_374_cov_74.174041_g41773_i0forward_frame_2 - 0.014 15.1 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Herpes-like virus membrane glycoprotein UL141 SPAM PF02090.15 NODE_49657_length_374_cov_81.879056_g41766_i0reverse_frame_3 - 0.0061 16.4 2.0 0.0061 16.4 2.0 2.3 1 1 1 2 2 2 1 Salmonella surface presentation of antigen gene type M protein Arnt_C PF18583.1 NODE_49657_length_374_cov_81.879056_g41766_i0reverse_frame_3 - 0.03 13.9 1.2 0.053 13.1 0.8 1.7 1 1 1 2 2 2 0 Aminoarabinose transferase C-terminal domain RNase_II_C_S1 PF18614.1 NODE_49655_length_374_cov_85.445428_g41764_i0reverse_frame_2 - 0.0011 18.9 0.1 0.0019 18.1 0.1 1.5 1 0 0 1 1 1 1 RNase II-type exonuclease C-terminal S1 domain TRM PF02005.16 NODE_49652_length_374_cov_93.651917_g41761_i0forward_frame_2 - 1.4e-07 31.1 0.1 1.9e-07 30.6 0.1 1.3 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Jak1_Phl PF17887.1 NODE_49652_length_374_cov_93.651917_g41761_i0forward_frame_2 - 0.045 13.7 0.9 0.054 13.5 0.9 1.3 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain Ribosomal_L29e PF01779.17 NODE_49650_length_374_cov_122.085546_g41759_i0reverse_frame_3 - 0.06 13.7 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 Ribosomal L29e protein family DUF4328 PF14219.6 NODE_49649_length_374_cov_127.097345_g41758_i0reverse_frame_3 - 0.23 11.0 1.4 1.3 8.5 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4328) DUF4224 PF13986.6 NODE_49649_length_374_cov_127.097345_g41758_i0forward_frame_2 - 0.015 15.2 0.7 0.04 13.8 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) HMG_box PF00505.19 NODE_49639_length_374_cov_2099.672566_g41748_i0reverse_frame_3 - 8.6e-07 29.3 0.2 8.6e-07 29.3 0.2 1.5 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_49639_length_374_cov_2099.672566_g41748_i0reverse_frame_3 - 0.0001 22.8 0.1 0.00018 22.0 0.1 1.4 1 0 0 1 1 1 1 HMG-box domain Hemopexin PF00045.19 NODE_49636_length_374_cov_13794.519174_g41745_i0reverse_frame_2 - 0.027 14.4 0.0 0.04 13.9 0.0 1.3 1 0 0 1 1 1 0 Hemopexin COPI_C PF06957.11 NODE_49634_length_375_cov_1.320588_g41743_i0forward_frame_2 - 1.5e-08 33.9 0.0 1.7e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus SHR3_chaperone PF08229.11 NODE_49632_length_375_cov_1.435294_g41741_i0reverse_frame_2 - 0.0089 15.0 0.9 0.011 14.8 0.9 1.1 1 0 0 1 1 1 1 ER membrane protein SH3 PIG-F PF06699.11 NODE_49632_length_375_cov_1.435294_g41741_i0forward_frame_3 - 9.2 6.4 9.0 11 6.2 9.0 1.1 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F DUF3385 PF11865.8 NODE_49632_length_375_cov_1.435294_g41741_i0forward_frame_2 - 0.078 12.9 3.2 0.11 12.4 0.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3385) DUF4049 PF13258.6 NODE_49631_length_375_cov_1.502941_g41740_i0forward_frame_3 - 3.4e-76 256.4 1.8 3.7e-76 256.3 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4049) Metallophos PF00149.28 NODE_49631_length_375_cov_1.502941_g41740_i0forward_frame_3 - 0.00049 20.7 0.1 0.00056 20.5 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Viral_Hsp90 PF03225.14 NODE_49631_length_375_cov_1.502941_g41740_i0forward_frame_3 - 0.031 12.8 0.1 0.038 12.5 0.1 1.0 1 0 0 1 1 1 0 Viral heat shock protein Hsp90 homologue Herpes_UL32 PF06070.11 NODE_49631_length_375_cov_1.502941_g41740_i0forward_frame_3 - 0.2 9.4 0.1 0.24 9.1 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 E7 PF00527.18 NODE_49629_length_375_cov_1.523529_g41738_i0forward_frame_3 - 0.024 14.8 0.2 0.033 14.4 0.2 1.2 1 0 0 1 1 1 0 E7 protein, Early protein RVT_2 PF07727.14 NODE_49628_length_375_cov_1.535294_g41737_i0forward_frame_3 - 1.6e-07 31.2 0.0 1.9e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Methyltransf_11 PF08241.12 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 1.7e-09 38.2 0.0 2.8e-09 37.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 1.7e-05 25.5 0.0 2.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 2.9e-05 23.5 0.0 0.00011 21.7 0.0 1.8 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 0.0029 17.4 0.0 0.0033 17.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Herpes_UL79 PF03049.14 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 0.0054 16.4 0.0 0.0058 16.3 0.0 1.1 1 0 0 1 1 1 1 UL79 family Methyltransf_31 PF13847.6 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 0.015 15.1 0.0 0.025 14.4 0.0 1.5 1 1 1 2 2 2 0 Methyltransferase domain Methyltransf_8 PF05148.15 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 0.026 14.4 0.0 0.041 13.7 0.0 1.4 1 1 0 1 1 1 0 Hypothetical methyltransferase SNAPc_SNAP43 PF09808.9 NODE_49623_length_375_cov_1.829412_g41732_i0reverse_frame_2 - 0.019 14.9 0.1 0.023 14.7 0.1 1.1 1 0 0 1 1 1 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 Sugar_tr PF00083.24 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 2e-30 106.0 5.7 2.2e-30 105.9 5.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 7.4e-18 64.6 6.4 8e-18 64.5 6.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_5 PF05631.14 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 0.0001 21.4 0.6 0.00014 20.9 0.5 1.4 1 1 1 2 2 2 1 Sugar-tranasporters, 12 TM TRI12 PF06609.13 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 0.00012 20.6 1.8 0.00014 20.4 1.8 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 0.00047 18.8 1.3 0.00057 18.6 1.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Phage_holin_3_2 PF04550.12 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 0.0058 17.1 5.5 0.013 16.0 2.8 2.1 2 0 0 2 2 2 1 Phage holin family 2 zf-C2H2_jaz PF12171.8 NODE_49617_length_375_cov_2.058824_g41726_i0reverse_frame_2 - 0.06 13.7 1.3 0.068 13.5 0.1 1.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding CaM_bdg_C0 PF10562.9 NODE_49616_length_375_cov_2.061765_g41725_i0reverse_frame_2 - 0.073 13.1 0.5 0.2 11.7 0.5 1.7 1 0 0 1 1 1 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit 3HCDH PF00725.22 NODE_49616_length_375_cov_2.061765_g41725_i0forward_frame_3 - 1.5e-07 31.9 0.1 0.0014 19.2 0.1 2.3 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MAP PF03642.13 NODE_49614_length_375_cov_2.282353_g41723_i0reverse_frame_2 - 0.0038 17.5 4.3 0.0041 17.4 2.6 1.8 2 0 0 2 2 2 1 MAP domain Retrotran_gag_3 PF14244.6 NODE_49612_length_375_cov_2.591176_g41721_i0reverse_frame_2 - 0.34 10.8 0.9 3.3 7.6 0.2 2.6 2 1 1 3 3 3 0 gag-polypeptide of LTR copia-type PALP PF00291.25 NODE_49609_length_375_cov_2.661765_g41718_i0forward_frame_2 - 2.9e-38 132.0 0.4 3.1e-38 131.9 0.4 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme LrgB PF04172.16 NODE_49597_length_375_cov_29.697059_g41706_i0reverse_frame_2 - 0.084 12.4 2.4 0.096 12.2 2.4 1.1 1 0 0 1 1 1 0 LrgB-like family Filo_VP35 PF02097.15 NODE_49597_length_375_cov_29.697059_g41706_i0forward_frame_3 - 0.088 11.9 0.1 0.088 11.9 0.1 1.2 1 0 0 1 1 1 0 Filoviridae VP35 Lebercilin PF15619.6 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 0.0039 16.9 13.7 0.0039 16.9 13.7 2.5 1 1 1 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease FixG_C PF11614.8 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 0.04 14.1 4.9 0.048 13.9 4.9 1.2 1 0 0 1 1 1 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF4407 PF14362.6 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 1 8.7 9.0 1.2 8.4 9.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF5065 PF16723.5 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 1.2 9.2 10.1 1.1 9.3 9.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5065) LsmAD PF06741.13 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 1.7 9.2 11.6 0.29 11.7 3.8 2.4 3 0 0 3 3 3 0 LsmAD domain DUF2433 PF10360.9 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 1.8 8.7 10.0 2.9 8.0 10.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) Exonuc_VII_L PF02601.15 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 2.9 7.4 12.8 3.4 7.1 12.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF5401 PF17380.2 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 7.6 4.5 22.0 8.6 4.3 22.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF4662 PF15578.6 NODE_49588_length_375_cov_68.408824_g41697_i0reverse_frame_2 - 0.0095 15.8 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4662) RET_CLD1 PF17756.1 NODE_49588_length_375_cov_68.408824_g41697_i0forward_frame_3 - 0.034 14.4 0.1 0.053 13.8 0.1 1.3 1 0 0 1 1 1 0 RET Cadherin like domain 1 CsoS2_M PF12288.8 NODE_49582_length_375_cov_80.423529_g41691_i0forward_frame_2 - 0.21 11.0 0.3 0.26 10.6 0.3 1.0 1 0 0 1 1 1 0 Carboxysome shell peptide mid-region CAP_N PF01213.19 NODE_49572_length_375_cov_127.879412_g41681_i0forward_frame_3 - 1.1 8.7 5.0 1.4 8.3 5.0 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal LRR_6 PF13516.6 NODE_49566_length_375_cov_253.497059_g41675_i0forward_frame_2 - 0.1 12.7 0.2 0.55 10.4 0.0 2.1 2 0 0 2 2 2 0 Leucine Rich repeat MucBP_2 PF17965.1 NODE_49565_length_375_cov_400.594118_g41674_i0reverse_frame_2 - 1.9 9.1 8.2 0.28 11.8 4.2 1.6 2 0 0 2 2 2 0 Mucin binding domain Peptidase_C1 PF00112.23 NODE_49562_length_375_cov_7295.723529_g41671_i0reverse_frame_3 - 2.9e-22 79.8 0.3 3.5e-22 79.6 0.3 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_49562_length_375_cov_7295.723529_g41671_i0reverse_frame_3 - 0.0012 17.8 0.3 0.0014 17.5 0.3 1.1 1 0 0 1 1 1 1 Peptidase C1-like family DUF3909 PF13077.6 ORF99713 - 0.085 13.0 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3909) MarC PF01914.17 ORF98899 - 5.3e-42 143.5 0.5 5.9e-42 143.4 0.5 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein SPW PF03779.14 ORF98899 - 0.043 13.4 2.4 0.08 12.5 1.4 1.9 1 1 1 2 2 2 0 SPW repeat Phage_holin_1 PF04531.13 ORF98899 - 0.25 11.9 1.0 0.37 11.4 1.0 1.3 1 0 0 1 1 1 0 Bacteriophage holin Carb_anhydrase PF00194.21 ORF98766 - 7.2e-12 45.4 0.9 8.2e-12 45.2 0.9 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DZR PF12773.7 ORF98326 - 0.011 15.7 0.6 0.017 15.2 0.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF98326 - 0.014 16.1 0.5 0.022 15.5 0.5 1.3 1 0 0 1 1 1 0 zinc-ribbon family Cript PF10235.9 ORF98326 - 0.03 14.9 0.7 0.034 14.7 0.1 1.5 2 0 0 2 2 2 0 Microtubule-associated protein CRIPT zf-C2HC5 PF06221.13 ORF98326 - 0.13 12.2 1.9 0.27 11.3 1.9 1.5 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type NOB1_Zn_bind PF08772.11 ORF98326 - 0.15 12.2 2.4 0.23 11.6 2.4 1.5 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 ORF98326 - 0.17 11.7 4.3 0.38 10.5 4.3 1.6 1 0 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF98326 - 7.8 6.1 7.2 3.2 7.3 4.2 1.9 2 1 0 2 2 2 0 zinc-ribbon domain Adaptin_N PF01602.20 ORF97632 - 2.6e-24 85.7 0.0 2.8e-24 85.6 0.0 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF97632 - 3.2e-20 72.8 0.0 9.4e-20 71.3 0.0 1.6 2 0 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 ORF97632 - 0.0025 18.2 0.0 0.011 16.1 0.0 1.9 1 1 0 1 1 1 1 HEAT repeats Fibrillarin PF01269.17 ORF975 - 8.7e-50 168.9 0.1 9.8e-50 168.8 0.1 1.0 1 0 0 1 1 1 1 Fibrillarin CDC27 PF09507.10 ORF96451 - 0.017 14.6 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 4HBT PF03061.22 ORF95626 - 3.4e-12 46.5 0.6 4.5e-12 46.2 0.5 1.3 1 1 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 ORF95626 - 0.15 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4442) 3Beta_HSD PF01073.19 ORF95557 - 5.8e-15 55.0 0.1 6.6e-15 54.9 0.1 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF95557 - 8.7e-12 45.0 0.2 1e-11 44.8 0.2 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 ORF95557 - 2.5e-06 26.9 0.2 2.2e-05 23.7 0.1 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF95557 - 4.7e-06 26.0 0.1 5.4e-06 25.8 0.1 1.0 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF95557 - 7.1e-05 22.8 0.0 8.5e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF95557 - 0.00026 20.5 0.1 0.00031 20.3 0.1 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 ORF95557 - 0.1 11.7 0.4 0.14 11.2 0.4 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain KR PF08659.10 ORF95557 - 0.13 12.2 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 KR domain Tim54 PF11711.8 ORF95410 - 0.0036 16.1 8.9 0.0043 15.9 8.9 1.1 1 0 0 1 1 1 1 Inner membrane protein import complex subunit Tim54 CDC45 PF02724.14 ORF95410 - 0.023 13.0 10.8 0.025 12.9 10.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Zip PF02535.22 ORF95410 - 0.053 12.7 3.5 0.055 12.7 3.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter RR_TM4-6 PF06459.12 ORF95410 - 0.058 13.2 9.1 0.066 13.0 9.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Sec62 PF03839.16 ORF95410 - 0.067 12.7 11.9 0.076 12.5 11.9 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Vfa1 PF08432.10 ORF95410 - 0.1 12.9 15.4 0.12 12.7 15.4 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Connexin PF00029.19 ORF95410 - 0.11 12.2 4.3 0.14 11.9 4.3 1.3 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 ORF95410 - 0.17 10.6 4.3 0.18 10.5 4.3 1.1 1 0 0 1 1 1 0 Presenilin Serinc PF03348.15 ORF95410 - 0.29 10.0 2.1 0.3 10.0 2.1 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) CLN3 PF02487.17 ORF95410 - 0.3 10.1 3.6 0.32 10.0 3.6 1.1 1 0 0 1 1 1 0 CLN3 protein DUF872 PF05915.12 ORF95410 - 0.36 11.0 1.8 0.62 10.2 1.8 1.6 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Astro_capsid_p PF12226.8 ORF95410 - 0.36 9.9 9.8 0.46 9.6 9.8 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF913 PF06025.12 ORF95410 - 0.52 9.2 5.6 0.58 9.1 5.6 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) SspB PF04386.13 ORF95410 - 0.64 9.9 9.6 0.91 9.4 9.6 1.2 1 0 0 1 1 1 0 Stringent starvation protein B TRAP_alpha PF03896.16 ORF95410 - 0.84 8.8 9.8 1 8.5 9.8 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit RRN3 PF05327.11 ORF95410 - 1.2 7.6 12.7 1.3 7.5 12.7 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Peptidase_S49_N PF08496.10 ORF95410 - 1.5 8.9 10.7 2 8.5 10.7 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DNA_pol_phi PF04931.13 ORF95410 - 1.6 6.8 16.3 1.8 6.6 16.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi BPL_N PF09825.9 ORF95410 - 1.6 7.7 7.0 1.9 7.5 7.0 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal RNA_pol_Rpc4 PF05132.14 ORF95410 - 1.7 9.1 12.0 2.2 8.7 12.0 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 V_ATPase_I PF01496.19 ORF95410 - 1.7 6.5 10.0 2 6.2 10.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RPN2_C PF18004.1 ORF95410 - 4 7.3 18.9 6.4 6.7 18.9 1.3 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain NOA36 PF06524.12 ORF95410 - 4.4 6.5 14.6 5.5 6.2 14.6 1.1 1 0 0 1 1 1 0 NOA36 protein Sporozoite_P67 PF05642.11 ORF95410 - 7.7 4.5 10.2 9.1 4.2 10.2 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Ureide_permease PF07168.11 ORF95410 - 8.3 5.0 5.3 9.4 4.9 5.3 1.1 1 0 0 1 1 1 0 Ureide permease MSA-2c PF12238.8 ORF9529 - 0.027 14.5 0.4 0.033 14.2 0.4 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Haem_degrading PF03928.14 ORF95178 - 7.5e-32 109.9 3.7 8.3e-32 109.7 3.7 1.0 1 0 0 1 1 1 1 Haem-degrading Diacid_rec PF05651.13 ORF95178 - 0.23 11.1 2.4 0.37 10.5 1.6 1.8 1 1 1 2 2 2 0 Putative sugar diacid recognition ABA_WDS PF02496.16 ORF95074 - 0.086 13.3 1.5 0.086 13.3 1.5 2.4 1 1 0 2 2 2 0 ABA/WDS induced protein GPR15L PF15854.5 ORF95074 - 1.7 9.0 4.4 0.91 9.8 1.0 2.1 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 Tower PF09121.10 ORF95074 - 5 7.4 7.7 1.2 9.4 0.2 2.9 3 1 0 3 3 3 0 Tower Golgin_A5 PF09787.9 ORF94699 - 1.4e-05 24.7 8.2 1.6e-05 24.6 8.2 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 Spc7 PF08317.11 ORF94699 - 0.00011 21.2 10.1 0.00016 20.7 10.1 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein FAM76 PF16046.5 ORF94699 - 0.0014 18.0 4.3 0.0014 18.0 4.3 1.9 1 1 1 2 2 2 1 FAM76 protein FliJ PF02050.16 ORF94699 - 0.0046 17.2 17.0 0.023 14.9 2.9 2.2 1 1 1 2 2 2 1 Flagellar FliJ protein CEP63 PF17045.5 ORF94699 - 0.0065 16.4 11.7 0.0095 15.9 11.7 1.1 1 0 0 1 1 1 1 Centrosomal protein of 63 kDa DUF4164 PF13747.6 ORF94699 - 0.007 16.6 10.2 0.22 11.8 5.2 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4164) DUF4618 PF15397.6 ORF94699 - 0.0071 15.8 9.9 0.0094 15.4 9.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) SlyX PF04102.12 ORF94699 - 0.012 16.3 20.9 0.044 14.4 4.8 3.3 1 1 1 2 2 2 0 SlyX AAA_13 PF13166.6 ORF94699 - 0.013 14.1 4.1 0.019 13.7 4.1 1.1 1 0 0 1 1 1 0 AAA domain TPR_MLP1_2 PF07926.12 ORF94699 - 0.015 15.3 16.4 0.13 12.3 16.4 1.9 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein E2R135 PF11570.8 ORF94699 - 0.019 15.3 0.5 1 9.7 0.0 2.0 2 0 0 2 2 2 0 Coiled-coil receptor-binding R-domain of colicin E2 DUF1664 PF07889.12 ORF94699 - 0.021 14.9 9.1 0.18 11.8 9.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Tup_N PF08581.10 ORF94699 - 0.038 14.3 15.8 0.043 14.1 3.1 2.3 1 1 1 2 2 2 0 Tup N-terminal Filament PF00038.21 ORF94699 - 0.047 13.3 11.7 0.34 10.4 12.0 1.7 1 1 1 2 2 2 0 Intermediate filament protein APG6_N PF17675.1 ORF94699 - 0.047 14.2 15.6 0.51 10.9 15.6 2.0 1 1 0 1 1 1 0 Apg6 coiled-coil region LCD1 PF09798.9 ORF94699 - 0.051 12.1 9.5 0.069 11.7 9.5 1.2 1 0 0 1 1 1 0 DNA damage checkpoint protein GAS PF13851.6 ORF94699 - 0.052 12.9 14.0 0.51 9.7 13.8 1.9 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Tho2 PF11262.8 ORF94699 - 0.059 12.6 8.3 0.026 13.7 6.0 1.4 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 Phage_GPO PF05929.11 ORF94699 - 0.06 13.0 7.5 0.071 12.7 7.5 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Nnf1 PF03980.14 ORF94699 - 0.072 13.5 11.8 0.076 13.4 9.5 1.9 1 1 1 2 2 2 0 Nnf1 DUF3584 PF12128.8 ORF94699 - 0.078 10.5 11.4 0.091 10.3 11.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) TMF_TATA_bd PF12325.8 ORF94699 - 0.08 13.2 13.4 0.73 10.1 5.1 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Csm1_N PF18504.1 ORF94699 - 0.087 13.2 14.4 0.15 12.4 3.3 2.9 1 1 2 3 3 3 0 Csm1 N-terminal domain DUF5082 PF16888.5 ORF94699 - 0.088 13.1 13.4 4.3 7.6 13.2 2.8 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) DUF3450 PF11932.8 ORF94699 - 0.093 12.0 16.1 1.4 8.2 2.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) JIP_LZII PF16471.5 ORF94699 - 0.11 12.7 1.2 0.11 12.7 1.2 2.8 1 1 0 2 2 2 0 JNK-interacting protein leucine zipper II DUF4407 PF14362.6 ORF94699 - 0.12 11.7 11.6 0.22 10.8 11.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) HIP1_clath_bdg PF16515.5 ORF94699 - 0.13 12.9 16.4 0.14 12.8 10.3 2.1 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ATG16 PF08614.11 ORF94699 - 0.15 12.2 15.7 0.81 9.9 5.7 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIC PF04977.15 ORF94699 - 0.16 11.8 21.3 1.9 8.3 9.7 3.4 1 1 1 2 2 2 0 Septum formation initiator UPF0242 PF06785.11 ORF94699 - 0.16 12.0 16.8 0.41 10.7 16.8 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMF_DNA_bd PF12329.8 ORF94699 - 0.18 11.8 10.1 0.34 10.9 0.3 2.8 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Baculo_PEP_C PF04513.12 ORF94699 - 0.23 11.5 5.5 0.74 9.9 5.8 1.6 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Tropomyosin_1 PF12718.7 ORF94699 - 0.24 11.5 13.6 0.35 11.0 3.8 2.2 1 1 1 2 2 2 0 Tropomyosin like DUF1640 PF07798.11 ORF94699 - 0.25 11.4 11.2 0.54 10.3 11.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) Jnk-SapK_ap_N PF09744.9 ORF94699 - 0.27 11.5 16.0 3.1 8.0 16.0 2.0 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 ADIP PF11559.8 ORF94699 - 0.28 11.3 15.6 0.19 11.8 10.9 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Fungal_TACC PF12709.7 ORF94699 - 0.28 11.6 9.6 2.5 8.6 0.6 3.1 1 1 3 4 4 4 0 Fungal Transforming acidic coiled-coil (TACC) proteins Gp58 PF07902.11 ORF94699 - 0.3 9.3 9.9 1.6 6.9 1.6 1.9 1 1 1 2 2 2 0 gp58-like protein FAM184 PF15665.5 ORF94699 - 0.3 10.8 13.3 0.54 10.0 13.3 1.4 1 1 0 1 1 1 0 Family with sequence similarity 184, A and B FliD_C PF07195.12 ORF94699 - 0.34 10.3 9.3 0.38 10.1 1.5 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Phage_GP20 PF06810.11 ORF94699 - 0.37 10.6 11.4 1 9.1 8.7 2.4 1 1 1 2 2 2 0 Phage minor structural protein GP20 TPD52 PF04201.15 ORF94699 - 0.49 10.0 7.4 1.7 8.3 2.9 2.1 1 1 1 2 2 2 0 Tumour protein D52 family Ax_dynein_light PF10211.9 ORF94699 - 0.52 10.2 13.2 0.15 12.0 3.9 2.1 1 1 1 2 2 2 0 Axonemal dynein light chain DUF4200 PF13863.6 ORF94699 - 0.57 10.6 15.4 1.2 9.6 15.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) COMP PF11598.8 ORF94699 - 0.66 10.5 0.2 0.66 10.5 0.2 3.3 3 1 0 3 3 2 0 Cartilage oligomeric matrix protein BRE1 PF08647.11 ORF94699 - 0.66 10.1 12.9 0.52 10.4 2.8 2.4 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase Nas2_N PF18265.1 ORF94699 - 0.67 9.9 4.7 1.8 8.5 0.2 2.8 1 1 2 3 3 3 0 Nas2 N_terminal domain DUF2968 PF11180.8 ORF94699 - 0.68 9.5 20.5 4.3 6.9 16.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) PRKG1_interact PF15898.5 ORF94699 - 0.71 10.8 11.5 0.43 11.5 2.8 2.4 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Nup54 PF13874.6 ORF94699 - 0.74 9.9 13.3 20 5.2 13.3 2.1 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 KELK PF15796.5 ORF94699 - 0.75 10.3 12.5 1.1e+03 0.1 12.5 2.5 1 1 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase GrpE PF01025.19 ORF94699 - 0.77 9.4 11.8 1.6 8.4 2.8 2.1 1 1 1 2 2 2 0 GrpE COQ7 PF03232.13 ORF94699 - 0.78 9.5 5.6 0.56 10.0 3.4 1.9 1 1 1 2 2 2 0 Ubiquinone biosynthesis protein COQ7 SKA2 PF16740.5 ORF94699 - 0.9 9.3 11.0 0.45 10.3 3.3 2.1 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 ZapB PF06005.12 ORF94699 - 0.93 10.0 18.0 8.4e+02 0.5 18.0 2.5 1 1 0 1 1 1 0 Cell division protein ZapB CASP_C PF08172.12 ORF94699 - 0.96 8.7 10.6 0.62 9.4 0.4 2.2 1 1 1 2 2 2 0 CASP C terminal Cluap1 PF10234.9 ORF94699 - 0.98 8.8 12.7 1.4 8.2 3.9 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 DUF724 PF05266.14 ORF94699 - 1 9.1 10.1 1.7 8.5 10.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Atg14 PF10186.9 ORF94699 - 1.1 8.3 13.2 0.54 9.3 3.8 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlaC_arch PF05377.11 ORF94699 - 1.2 9.6 10.6 8.6 6.8 1.0 3.3 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) Adhesin_P1_N PF18652.1 ORF94699 - 1.3 9.1 6.8 0.69 10.0 1.8 2.8 1 1 1 2 2 2 0 Adhesin P1 N-terminal domain DUF4140 PF13600.6 ORF94699 - 1.5 9.3 11.2 10 6.7 5.4 2.3 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) HALZ PF02183.18 ORF94699 - 1.7 8.9 17.0 0.72 10.1 0.5 4.6 2 2 3 5 5 5 0 Homeobox associated leucine zipper bZIP_1 PF00170.21 ORF94699 - 1.9 8.7 10.9 0.84 9.8 2.0 3.0 2 1 1 3 3 3 0 bZIP transcription factor Sec2p PF06428.11 ORF94699 - 2 8.4 15.8 0.96 9.5 3.5 2.6 1 1 2 3 3 3 0 GDP/GTP exchange factor Sec2p TMPIT PF07851.13 ORF94699 - 2.4 7.3 8.9 2.3 7.4 7.7 1.5 1 1 1 2 2 2 0 TMPIT-like protein CLZ PF16526.5 ORF94699 - 2.5 8.5 11.3 0.6 10.5 4.8 2.6 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Spc24 PF08286.11 ORF94699 - 2.9 8.2 12.1 0.99 9.7 2.4 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 GIT_CC PF16559.5 ORF94699 - 3 7.8 15.1 1.6 8.7 5.1 3.0 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF2205 PF10224.9 ORF94699 - 3 7.9 13.3 4.3 7.4 1.2 2.4 1 1 1 2 2 2 0 Short coiled-coil protein CENP-H PF05837.12 ORF94699 - 4.5 7.7 13.3 1.8 9.0 4.0 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) XhlA PF10779.9 ORF94699 - 4.7 7.5 8.1 2.9 8.1 1.7 2.7 1 1 2 3 3 3 0 Haemolysin XhlA DUF4834 PF16118.5 ORF94681 - 0.043 14.8 1.7 0.054 14.5 1.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Apelin PF15360.6 ORF94427 - 0.16 12.5 7.3 0.47 11.1 7.3 1.8 1 1 0 1 1 1 0 APJ endogenous ligand Med20 PF08612.11 ORF94361 - 1.2e-05 24.8 0.0 1.3e-05 24.7 0.0 1.0 1 0 0 1 1 1 1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex LRR19-TM PF15176.6 ORF94087 - 0.34 10.9 0.9 0.45 10.5 0.9 1.3 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Med20 PF08612.11 ORF93341 - 6.8e-06 25.6 0.0 7.3e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex CLAMP PF14769.6 ORF92935 - 1.3e-06 28.7 0.2 2e-06 28.2 0.2 1.3 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 Golgin_A5 PF09787.9 ORF92741 - 1.4e-05 24.7 8.2 1.6e-05 24.6 8.2 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 Spc7 PF08317.11 ORF92741 - 0.00011 21.2 10.1 0.00016 20.7 10.1 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein FAM76 PF16046.5 ORF92741 - 0.0014 18.0 4.3 0.0014 18.0 4.3 1.9 1 1 1 2 2 2 1 FAM76 protein FliJ PF02050.16 ORF92741 - 0.0046 17.2 17.0 0.023 14.9 2.9 2.2 1 1 1 2 2 2 1 Flagellar FliJ protein CEP63 PF17045.5 ORF92741 - 0.0065 16.4 11.7 0.0095 15.9 11.7 1.1 1 0 0 1 1 1 1 Centrosomal protein of 63 kDa DUF4164 PF13747.6 ORF92741 - 0.007 16.6 10.2 0.22 11.8 5.2 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4164) DUF4618 PF15397.6 ORF92741 - 0.0071 15.8 9.9 0.0094 15.4 9.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) SlyX PF04102.12 ORF92741 - 0.012 16.3 20.9 0.044 14.4 4.8 3.3 1 1 1 2 2 2 0 SlyX AAA_13 PF13166.6 ORF92741 - 0.013 14.1 4.1 0.019 13.7 4.1 1.1 1 0 0 1 1 1 0 AAA domain TPR_MLP1_2 PF07926.12 ORF92741 - 0.015 15.3 16.4 0.13 12.3 16.4 1.9 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein E2R135 PF11570.8 ORF92741 - 0.019 15.3 0.5 1 9.7 0.0 2.0 2 0 0 2 2 2 0 Coiled-coil receptor-binding R-domain of colicin E2 DUF1664 PF07889.12 ORF92741 - 0.021 14.9 9.1 0.18 11.8 9.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Tup_N PF08581.10 ORF92741 - 0.038 14.3 15.8 0.043 14.1 3.1 2.3 1 1 1 2 2 2 0 Tup N-terminal Filament PF00038.21 ORF92741 - 0.047 13.3 11.7 0.34 10.4 12.0 1.7 1 1 1 2 2 2 0 Intermediate filament protein APG6_N PF17675.1 ORF92741 - 0.047 14.2 15.6 0.51 10.9 15.6 2.0 1 1 0 1 1 1 0 Apg6 coiled-coil region LCD1 PF09798.9 ORF92741 - 0.051 12.1 9.5 0.069 11.7 9.5 1.2 1 0 0 1 1 1 0 DNA damage checkpoint protein GAS PF13851.6 ORF92741 - 0.052 12.9 14.0 0.51 9.7 13.8 1.9 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Tho2 PF11262.8 ORF92741 - 0.059 12.6 8.3 0.026 13.7 6.0 1.4 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 Phage_GPO PF05929.11 ORF92741 - 0.06 13.0 7.5 0.071 12.7 7.5 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Nnf1 PF03980.14 ORF92741 - 0.072 13.5 11.8 0.076 13.4 9.5 1.9 1 1 1 2 2 2 0 Nnf1 DUF3584 PF12128.8 ORF92741 - 0.078 10.5 11.4 0.091 10.3 11.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) TMF_TATA_bd PF12325.8 ORF92741 - 0.08 13.2 13.4 0.73 10.1 5.1 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Csm1_N PF18504.1 ORF92741 - 0.087 13.2 14.4 0.15 12.4 3.3 2.9 1 1 2 3 3 3 0 Csm1 N-terminal domain DUF5082 PF16888.5 ORF92741 - 0.088 13.1 13.4 4.3 7.6 13.2 2.8 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) DUF3450 PF11932.8 ORF92741 - 0.093 12.0 16.1 1.4 8.2 2.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) JIP_LZII PF16471.5 ORF92741 - 0.11 12.7 1.2 0.11 12.7 1.2 2.8 1 1 0 2 2 2 0 JNK-interacting protein leucine zipper II DUF4407 PF14362.6 ORF92741 - 0.12 11.7 11.6 0.22 10.8 11.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) HIP1_clath_bdg PF16515.5 ORF92741 - 0.13 12.9 16.4 0.14 12.8 10.3 2.1 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ATG16 PF08614.11 ORF92741 - 0.15 12.2 15.7 0.81 9.9 5.7 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIC PF04977.15 ORF92741 - 0.16 11.8 21.3 1.9 8.3 9.7 3.4 1 1 1 2 2 2 0 Septum formation initiator UPF0242 PF06785.11 ORF92741 - 0.16 12.0 16.8 0.41 10.7 16.8 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMF_DNA_bd PF12329.8 ORF92741 - 0.18 11.8 10.1 0.34 10.9 0.3 2.8 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Baculo_PEP_C PF04513.12 ORF92741 - 0.23 11.5 5.5 0.74 9.9 5.8 1.6 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Tropomyosin_1 PF12718.7 ORF92741 - 0.24 11.5 13.6 0.35 11.0 3.8 2.2 1 1 1 2 2 2 0 Tropomyosin like DUF1640 PF07798.11 ORF92741 - 0.25 11.4 11.2 0.54 10.3 11.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) Jnk-SapK_ap_N PF09744.9 ORF92741 - 0.27 11.5 16.0 3.1 8.0 16.0 2.0 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 ADIP PF11559.8 ORF92741 - 0.28 11.3 15.6 0.19 11.8 10.9 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Fungal_TACC PF12709.7 ORF92741 - 0.28 11.6 9.6 2.5 8.6 0.6 3.1 1 1 3 4 4 4 0 Fungal Transforming acidic coiled-coil (TACC) proteins Gp58 PF07902.11 ORF92741 - 0.3 9.3 9.9 1.6 6.9 1.6 1.9 1 1 1 2 2 2 0 gp58-like protein FAM184 PF15665.5 ORF92741 - 0.3 10.8 13.3 0.54 10.0 13.3 1.4 1 1 0 1 1 1 0 Family with sequence similarity 184, A and B FliD_C PF07195.12 ORF92741 - 0.34 10.3 9.3 0.38 10.1 1.5 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Phage_GP20 PF06810.11 ORF92741 - 0.37 10.6 11.4 1 9.1 8.7 2.4 1 1 1 2 2 2 0 Phage minor structural protein GP20 TPD52 PF04201.15 ORF92741 - 0.49 10.0 7.4 1.7 8.3 2.9 2.1 1 1 1 2 2 2 0 Tumour protein D52 family Ax_dynein_light PF10211.9 ORF92741 - 0.52 10.2 13.2 0.15 12.0 3.9 2.1 1 1 1 2 2 2 0 Axonemal dynein light chain DUF4200 PF13863.6 ORF92741 - 0.57 10.6 15.4 1.2 9.6 15.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) COMP PF11598.8 ORF92741 - 0.66 10.5 0.2 0.66 10.5 0.2 3.3 3 1 0 3 3 2 0 Cartilage oligomeric matrix protein BRE1 PF08647.11 ORF92741 - 0.66 10.1 12.9 0.52 10.4 2.8 2.4 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase Nas2_N PF18265.1 ORF92741 - 0.67 9.9 4.7 1.8 8.5 0.2 2.8 1 1 2 3 3 3 0 Nas2 N_terminal domain DUF2968 PF11180.8 ORF92741 - 0.68 9.5 20.5 4.3 6.9 16.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) PRKG1_interact PF15898.5 ORF92741 - 0.71 10.8 11.5 0.43 11.5 2.8 2.4 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Nup54 PF13874.6 ORF92741 - 0.74 9.9 13.3 20 5.2 13.3 2.1 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 KELK PF15796.5 ORF92741 - 0.75 10.3 12.5 1.1e+03 0.1 12.5 2.5 1 1 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase GrpE PF01025.19 ORF92741 - 0.77 9.4 11.8 1.6 8.4 2.8 2.1 1 1 1 2 2 2 0 GrpE COQ7 PF03232.13 ORF92741 - 0.78 9.5 5.6 0.56 10.0 3.4 1.9 1 1 1 2 2 2 0 Ubiquinone biosynthesis protein COQ7 SKA2 PF16740.5 ORF92741 - 0.9 9.3 11.0 0.45 10.3 3.3 2.1 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 ZapB PF06005.12 ORF92741 - 0.93 10.0 18.0 8.4e+02 0.5 18.0 2.5 1 1 0 1 1 1 0 Cell division protein ZapB CASP_C PF08172.12 ORF92741 - 0.96 8.7 10.6 0.62 9.4 0.4 2.2 1 1 1 2 2 2 0 CASP C terminal Cluap1 PF10234.9 ORF92741 - 0.98 8.8 12.7 1.4 8.2 3.9 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 DUF724 PF05266.14 ORF92741 - 1 9.1 10.1 1.7 8.5 10.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Atg14 PF10186.9 ORF92741 - 1.1 8.3 13.2 0.54 9.3 3.8 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlaC_arch PF05377.11 ORF92741 - 1.2 9.6 10.6 8.6 6.8 1.0 3.3 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) Adhesin_P1_N PF18652.1 ORF92741 - 1.3 9.1 6.8 0.69 10.0 1.8 2.8 1 1 1 2 2 2 0 Adhesin P1 N-terminal domain DUF4140 PF13600.6 ORF92741 - 1.5 9.3 11.2 10 6.7 5.4 2.3 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) HALZ PF02183.18 ORF92741 - 1.7 8.9 17.0 0.72 10.1 0.5 4.6 2 2 3 5 5 5 0 Homeobox associated leucine zipper bZIP_1 PF00170.21 ORF92741 - 1.9 8.7 10.9 0.84 9.8 2.0 3.0 2 1 1 3 3 3 0 bZIP transcription factor Sec2p PF06428.11 ORF92741 - 2 8.4 15.8 0.96 9.5 3.5 2.6 1 1 2 3 3 3 0 GDP/GTP exchange factor Sec2p TMPIT PF07851.13 ORF92741 - 2.4 7.3 8.9 2.3 7.4 7.7 1.5 1 1 1 2 2 2 0 TMPIT-like protein CLZ PF16526.5 ORF92741 - 2.5 8.5 11.3 0.6 10.5 4.8 2.6 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Spc24 PF08286.11 ORF92741 - 2.9 8.2 12.1 0.99 9.7 2.4 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 GIT_CC PF16559.5 ORF92741 - 3 7.8 15.1 1.6 8.7 5.1 3.0 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF2205 PF10224.9 ORF92741 - 3 7.9 13.3 4.3 7.4 1.2 2.4 1 1 1 2 2 2 0 Short coiled-coil protein CENP-H PF05837.12 ORF92741 - 4.5 7.7 13.3 1.8 9.0 4.0 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) XhlA PF10779.9 ORF92741 - 4.7 7.5 8.1 2.9 8.1 1.7 2.7 1 1 2 3 3 3 0 Haemolysin XhlA DAGK_acc PF00609.19 ORF92503 - 6.9e-05 23.2 0.0 0.00011 22.6 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain TetR_C_31 PF17940.1 ORF92463 - 0.088 13.0 4.6 2.1 8.6 1.0 2.4 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DSPc PF00782.20 ORF91553 - 2.8 7.7 5.9 2.8 7.7 0.6 2.1 2 0 0 2 2 2 0 Dual specificity phosphatase, catalytic domain Choline_transpo PF04515.12 ORF90820 - 6.8e-09 35.4 0.5 7.4e-09 35.2 0.5 1.0 1 0 0 1 1 1 1 Plasma-membrane choline transporter CSG2 PF16965.5 ORF90820 - 0.086 11.8 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator ALG3 PF05208.13 ORF90441 - 3.5e-11 43.2 1.5 4.7e-11 42.7 1.5 1.2 1 0 0 1 1 1 1 ALG3 protein DUF4704 PF15787.5 ORF89783 - 0.093 12.0 1.3 0.11 11.8 1.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4704) MRP-L47 PF06984.13 ORF89783 - 0.14 12.3 0.7 2 8.6 0.1 2.1 1 1 1 2 2 2 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) FliD_N PF02465.18 ORF89669 - 0.0069 17.0 1.2 0.0089 16.7 1.2 1.2 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus bZIP_1 PF00170.21 ORF89669 - 0.019 15.0 6.1 0.032 14.3 6.1 1.3 1 0 0 1 1 1 0 bZIP transcription factor DivIC PF04977.15 ORF89669 - 0.11 12.2 2.0 0.17 11.7 2.0 1.3 1 0 0 1 1 1 0 Septum formation initiator EMP24_GP25L PF01105.24 ORF89669 - 0.94 9.4 3.8 1.7 8.5 3.8 1.4 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD TBP-binding PF09247.11 ORF87804 - 0.086 13.1 0.1 0.16 12.2 0.1 1.4 1 0 0 1 1 1 0 TATA box-binding protein binding Cys_rich_VLP PF14194.6 ORF87526 - 0.2 11.8 1.2 2.8 8.2 0.2 2.3 2 0 0 2 2 2 0 Cysteine-rich VLP 14-3-3 PF00244.20 ORF87169 - 0.025 14.1 1.9 0.029 13.9 1.9 1.1 1 0 0 1 1 1 0 14-3-3 protein NAD_Gly3P_dh_N PF01210.23 ORF87169 - 0.13 12.2 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CBP_BcsG PF11658.8 ORF87132 - 7e-54 183.1 0.0 7.7e-54 183.0 0.0 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG DUF4186 PF13811.6 ORF86832 - 0.069 13.2 1.4 0.092 12.8 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) DHDPS PF00701.22 ORF86773 - 7.4e-35 120.1 0.0 8.2e-35 119.9 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family UBA_3 PF09288.10 ORF86773 - 0.058 13.2 0.0 0.087 12.6 0.0 1.3 1 0 0 1 1 1 0 Fungal ubiquitin-associated domain BKACE PF05853.12 ORF86590 - 0.12 11.6 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme PrgU PF09627.10 ORF86232 - 0.047 13.7 0.0 0.078 12.9 0.0 1.6 1 1 0 1 1 1 0 PrgU-like protein DUF547 PF04784.14 ORF86232 - 0.068 13.2 0.5 0.13 12.3 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF547 DUF2637 PF10935.8 ORF8371 - 0.037 13.9 0.1 0.053 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2637) tRNA-synt_1g PF09334.11 ORF81995 - 3e-05 22.9 0.0 4.1e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF81995 - 0.00068 19.1 0.0 0.00089 18.7 0.0 1.3 1 1 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain Herpes_capsid PF06112.11 ORF80730 - 0.17 11.9 0.9 0.19 11.8 0.9 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF4186 PF13811.6 ORF80418 - 0.019 15.0 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) ADH_N PF08240.12 ORF79576 - 6.3e-09 35.7 0.0 2.3e-08 33.9 0.0 1.8 1 1 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 ORF79576 - 0.073 13.0 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase Cupin_8 PF13621.6 ORF78996 - 0.05 13.3 4.0 0.058 13.1 4.0 1.1 1 0 0 1 1 1 0 Cupin-like domain S_layer_N PF05123.12 ORF78996 - 0.091 12.6 2.2 0.11 12.4 2.2 1.0 1 0 0 1 1 1 0 S-layer like family, N-terminal region Dpy-30 PF05186.13 ORF77904 - 7e-07 28.8 0.1 0.039 13.7 0.0 2.2 2 0 0 2 2 2 2 Dpy-30 motif Salp15 PF12115.8 ORF76754 - 0.56 10.6 4.3 0.97 9.9 4.3 1.4 1 1 0 1 1 1 0 Salivary protein of 15kDa inhibits CD4+ T cell activation DUF3909 PF13077.6 ORF76673 - 0.033 14.4 0.2 0.045 13.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3909) Vps39_2 PF10367.9 ORF7648 - 0.085 13.3 0.0 0.098 13.1 0.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 Pkinase PF00069.25 ORF74699 - 1.2e-13 51.1 0.0 1.3e-13 51.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF74699 - 4.3e-08 32.4 0.0 5e-08 32.1 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF74699 - 0.00014 21.3 0.0 0.00014 21.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF74699 - 0.0018 18.3 0.1 0.0036 17.3 0.0 1.5 2 0 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF74699 - 0.019 14.3 0.0 0.021 14.2 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family NAD-GH PF10712.9 ORF74402 - 5e-28 97.9 6.8 5.8e-28 97.7 6.8 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase 3Beta_HSD PF01073.19 ORF74124 - 5.8e-15 55.0 0.1 6.6e-15 54.9 0.1 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF74124 - 8.7e-12 45.0 0.2 1e-11 44.8 0.2 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 ORF74124 - 2.5e-06 26.9 0.2 2.2e-05 23.7 0.1 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF74124 - 4.7e-06 26.0 0.1 5.4e-06 25.8 0.1 1.0 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF74124 - 7.1e-05 22.8 0.0 8.5e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF74124 - 0.00026 20.5 0.1 0.00031 20.3 0.1 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 ORF74124 - 0.1 11.7 0.4 0.14 11.2 0.4 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain KR PF08659.10 ORF74124 - 0.13 12.2 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 KR domain Mss4 PF04421.13 ORF73039 - 4.9e-07 29.8 0.0 6.1e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Mss4 protein CAP_N PF01213.19 ORF72933 - 2.3 7.6 5.8 2.8 7.3 5.8 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal RCC1_2 PF13540.6 ORF72786 - 3e-09 36.4 2.3 0.15 11.9 0.0 3.4 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat NSs PF11073.8 ORF72 - 0.0092 15.5 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 1 Rift valley fever virus non structural protein (NSs) like Mt_ATP-synt_B PF05405.14 ORF7196 - 0.023 14.3 1.3 0.027 14.1 1.3 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Ant_C PF05586.11 ORF7196 - 0.072 13.7 0.2 0.1 13.2 0.2 1.2 1 0 0 1 1 1 0 Anthrax receptor C-terminus region CH_2 PF06294.11 ORF7196 - 4.3 7.5 7.0 9.6 6.4 2.2 2.1 1 1 1 2 2 2 0 CH-like domain in sperm protein CAP_N PF01213.19 ORF70458 - 2.3 7.6 5.8 2.8 7.3 5.8 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF2298 PF10060.9 ORF69914 - 0.0027 16.5 5.2 0.0031 16.3 5.2 1.0 1 0 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) DUF2085 PF09858.9 ORF69914 - 0.077 13.5 2.3 0.12 12.9 1.4 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2085) HlyIII PF03006.20 ORF69914 - 0.12 12.1 3.4 0.37 10.5 3.4 1.7 1 1 0 1 1 1 0 Haemolysin-III related NDUF_C2 PF06374.11 ORF69914 - 0.13 12.4 0.2 0.28 11.3 0.1 1.6 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) DUF2108 PF09881.9 ORF69914 - 0.17 11.8 5.6 2.8 8.0 0.8 2.4 2 1 0 2 2 2 0 Predicted membrane protein (DUF2108) DUF998 PF06197.13 ORF69914 - 0.88 9.1 13.4 1.2 8.6 13.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF998) E1-E2_ATPase PF00122.20 ORF69914 - 1.3 8.6 5.1 3.6 7.1 1.4 2.0 1 1 1 2 2 2 0 E1-E2 ATPase DUF4282 PF14110.6 ORF69914 - 1.6 9.5 6.7 1.2 9.9 1.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4282) UPF0016 PF01169.19 ORF69914 - 2.7 8.4 12.3 0.29 11.5 4.9 2.6 1 1 2 3 3 3 0 Uncharacterized protein family UPF0016 FliD_N PF02465.18 ORF69541 - 0.0069 17.0 1.2 0.0089 16.7 1.2 1.2 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus bZIP_1 PF00170.21 ORF69541 - 0.019 15.0 6.1 0.032 14.3 6.1 1.3 1 0 0 1 1 1 0 bZIP transcription factor DivIC PF04977.15 ORF69541 - 0.11 12.2 2.0 0.17 11.7 2.0 1.3 1 0 0 1 1 1 0 Septum formation initiator EMP24_GP25L PF01105.24 ORF69541 - 0.94 9.4 3.8 1.7 8.5 3.8 1.4 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD 2_5_RNA_ligase2 PF13563.6 ORF66296 - 0.0027 17.6 0.0 0.0033 17.4 0.0 1.2 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily Tir_receptor_M PF03549.14 ORF6529 - 0.014 15.7 0.1 0.033 14.5 0.0 1.6 1 1 0 1 1 1 0 Translocated intimin receptor (Tir) intimin-binding domain DUF4712 PF15830.5 ORF6529 - 0.066 12.9 6.2 0.077 12.7 6.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4712) MAP17 PF15807.5 ORF6529 - 0.66 10.2 8.2 0.94 9.7 8.2 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 RNase_HII PF01351.18 ORF6529 - 4.8 7.0 8.8 1.7 8.5 5.5 1.7 1 1 1 2 2 2 0 Ribonuclease HII MFS_1 PF07690.16 ORF64970 - 2.1e-12 46.7 0.1 2.2e-12 46.6 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily CLN3 PF02487.17 ORF64970 - 0.03 13.4 0.0 0.037 13.1 0.0 1.1 1 0 0 1 1 1 0 CLN3 protein Med20 PF08612.11 ORF64802 - 6.8e-06 25.6 0.0 7.3e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex Bac_export_2 PF01312.19 ORF63914 - 0.068 12.4 2.1 0.074 12.3 2.1 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family Dpy-30 PF05186.13 ORF63323 - 0.0098 15.6 0.3 0.015 15.0 0.3 1.3 1 0 0 1 1 1 1 Dpy-30 motif DUF4763 PF15960.5 ORF63323 - 0.018 14.4 3.7 0.02 14.2 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) PspB PF06667.12 ORF63323 - 0.028 14.5 1.2 0.048 13.7 1.2 1.3 1 0 0 1 1 1 0 Phage shock protein B DUF1722 PF08349.11 ORF63323 - 0.14 12.4 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) Spc24 PF08286.11 ORF63323 - 0.15 12.3 2.6 0.21 11.8 2.6 1.3 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF5063 PF16702.5 ORF62617 - 0.0031 17.9 0.1 0.0053 17.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5063) Cob_adeno_trans PF01923.18 ORF62617 - 0.0097 16.1 0.2 0.012 15.8 0.2 1.1 1 0 0 1 1 1 1 Cobalamin adenosyltransferase OmpH PF03938.14 ORF62617 - 0.058 13.7 4.8 0.092 13.1 4.9 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) BLYB PF05289.11 ORF62617 - 0.075 13.2 13.0 0.11 12.7 12.7 1.5 1 1 0 1 1 1 0 Borrelia hemolysin accessory protein YtxH PF12732.7 ORF62617 - 0.21 12.1 3.8 3.3 8.3 3.8 2.1 1 1 0 1 1 1 0 YtxH-like protein 60KD_IMP PF02096.20 ORF62617 - 0.77 9.6 6.8 0.54 10.1 5.2 1.5 1 1 0 1 1 1 0 60Kd inner membrane protein DUF2228 PF10228.9 ORF62617 - 1.4 8.6 6.8 0.59 9.8 3.6 1.7 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2228) Choline_kin_N PF04428.14 ORF61297 - 0.048 13.3 0.0 0.077 12.7 0.0 1.3 1 0 0 1 1 1 0 Choline kinase N terminus DUF2298 PF10060.9 ORF58427 - 0.0027 16.5 5.2 0.0031 16.3 5.2 1.0 1 0 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) DUF2085 PF09858.9 ORF58427 - 0.077 13.5 2.3 0.12 12.9 1.4 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2085) HlyIII PF03006.20 ORF58427 - 0.12 12.1 3.4 0.37 10.5 3.4 1.7 1 1 0 1 1 1 0 Haemolysin-III related NDUF_C2 PF06374.11 ORF58427 - 0.13 12.4 0.2 0.28 11.3 0.1 1.6 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) DUF2108 PF09881.9 ORF58427 - 0.17 11.8 5.6 2.8 8.0 0.8 2.4 2 1 0 2 2 2 0 Predicted membrane protein (DUF2108) DUF998 PF06197.13 ORF58427 - 0.88 9.1 13.4 1.2 8.6 13.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF998) E1-E2_ATPase PF00122.20 ORF58427 - 1.3 8.6 5.1 3.6 7.1 1.4 2.0 1 1 1 2 2 2 0 E1-E2 ATPase DUF4282 PF14110.6 ORF58427 - 1.6 9.5 6.7 1.2 9.9 1.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4282) UPF0016 PF01169.19 ORF58427 - 2.7 8.4 12.3 0.29 11.5 4.9 2.6 1 1 2 3 3 3 0 Uncharacterized protein family UPF0016 DEPP PF15343.6 ORF56955 - 0.18 11.9 4.1 0.24 11.5 4.1 1.2 1 0 0 1 1 1 0 Decidual protein induced by progesterone family ERGIC_N PF13850.6 ORF56756 - 0.015 15.7 0.1 0.02 15.2 0.1 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) KASH_CCD PF14662.6 ORF56402 - 0.0029 17.5 0.7 0.0037 17.1 0.7 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH MA3 PF02847.17 ORF56402 - 0.03 14.3 1.4 0.042 13.8 1.4 1.2 1 0 0 1 1 1 0 MA3 domain IL6 PF00489.17 ORF56402 - 0.049 13.2 1.8 0.068 12.7 1.6 1.4 1 1 0 1 1 1 0 Interleukin-6/G-CSF/MGF family Helicase_IV_N PF12462.8 ORF55568 - 0.045 13.7 0.2 0.06 13.3 0.2 1.1 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal MtmB PF05369.12 ORF55568 - 0.075 11.8 0.1 0.087 11.6 0.1 1.0 1 0 0 1 1 1 0 Monomethylamine methyltransferase MtmB SNAP PF14938.6 ORF54855 - 2e-24 86.5 4.8 2.2e-24 86.4 4.8 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP DHR-2 PF06920.13 ORF54855 - 0.0013 17.4 0.8 0.0026 16.5 0.2 1.6 1 1 1 2 2 2 1 Dock homology region 2 TPR_2 PF07719.17 ORF54855 - 0.0026 17.7 6.2 0.14 12.3 1.9 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF54855 - 0.003 17.5 3.9 8.2 6.7 0.0 3.3 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF54855 - 0.0066 17.2 0.5 0.7 10.9 0.3 2.7 2 1 1 3 3 3 1 Tetratricopeptide repeat ATPgrasp_Ter PF15632.6 ORF54855 - 0.034 13.9 0.0 0.052 13.3 0.0 1.2 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon TPR_16 PF13432.6 ORF54855 - 0.062 14.0 0.1 1.6 9.5 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF54855 - 0.064 13.9 2.4 1 10.1 0.0 2.7 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF54855 - 0.072 13.4 1.2 1.1 9.6 0.6 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat PB1 PF00564.24 ORF54855 - 0.095 12.7 0.4 0.94 9.5 0.2 2.1 1 1 1 2 2 2 0 PB1 domain MATH PF00917.26 ORF54855 - 0.098 12.8 1.3 0.17 12.1 0.2 1.8 2 0 0 2 2 2 0 MATH domain SHNi-TPR PF10516.9 ORF54855 - 0.098 12.1 0.7 6.9 6.2 0.2 3.0 3 0 0 3 3 3 0 SHNi-TPR TPR_10 PF13374.6 ORF54855 - 0.75 9.8 2.6 7.2 6.6 1.2 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_3 PF07720.12 ORF54855 - 0.99 9.5 4.5 13 5.9 0.1 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF54855 - 1.2 8.9 5.6 4.1 7.2 1.1 2.5 3 0 0 3 3 3 0 TPR repeat TPR_8 PF13181.6 ORF54855 - 3.8 8.0 6.9 5.6 7.4 2.6 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat NSF PF02071.20 ORF54855 - 3.9 8.6 11.2 1.4 10.0 1.6 4.1 4 0 0 4 4 4 0 Aromatic-di-Alanine (AdAR) repeat TPR_1 PF00515.28 ORF54855 - 4.6 7.2 10.2 11 6.0 0.3 3.1 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF3791 PF12668.7 ORF53790 - 0.031 14.3 0.5 0.082 13.0 0.0 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3791) DUF2017 PF09438.10 ORF53790 - 0.13 12.2 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2017) DUF5527 PF17665.1 ORF53169 - 0.099 12.2 7.0 0.16 11.5 7.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5527) ICMT PF04140.14 ORF52946 - 7.8e-25 87.1 0.1 9.7e-25 86.8 0.1 1.1 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF52946 - 1.1e-09 38.6 0.3 1.2e-09 38.5 0.3 1.0 1 0 0 1 1 1 1 Phospholipid methyltransferase DUF1295 PF06966.12 ORF52946 - 0.0041 16.7 0.7 0.005 16.4 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) BRO1 PF03097.18 ORF50629 - 0.0097 14.7 0.0 0.011 14.6 0.0 1.0 1 0 0 1 1 1 1 BRO1-like domain Peptidase_C39 PF03412.15 ORF50629 - 0.074 12.9 0.2 0.081 12.7 0.2 1.2 1 0 0 1 1 1 0 Peptidase C39 family Med20 PF08612.11 ORF50521 - 6.8e-06 25.6 0.0 7.3e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex WXG100 PF06013.12 ORF49237 - 0.31 11.3 2.0 0.52 10.6 0.1 2.0 2 0 0 2 2 2 0 Proteins of 100 residues with WXG WD40 PF00400.32 ORF49166 - 0.00039 21.2 0.0 0.00075 20.3 0.0 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat Med28 PF11594.8 ORF49166 - 0.069 13.2 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Mediator complex subunit 28 PseudoU_synth_1 PF01416.20 ORF48745 - 2.4e-09 37.6 0.0 3.2e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 tRNA pseudouridine synthase Telethonin PF09470.10 ORF47897 - 0.11 12.4 5.9 0.12 12.3 5.9 1.1 1 0 0 1 1 1 0 Telethonin protein Ras PF00071.22 ORF47652 - 1.3e-30 106.2 0.0 1.4e-30 106.0 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF47652 - 4.1e-23 81.9 0.0 4.8e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF47652 - 1.1e-09 38.0 0.0 1.3e-09 37.8 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF47652 - 0.06 12.7 0.0 0.07 12.5 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Presenilin PF01080.17 ORF46955 - 0.8 8.4 10.2 0.89 8.2 10.2 1.0 1 0 0 1 1 1 0 Presenilin Ion_trans PF00520.31 ORF46941 - 0.0018 17.6 1.7 0.0032 16.7 1.7 1.4 1 0 0 1 1 1 1 Ion transport protein Ank_2 PF12796.7 ORF46827 - 1.4e-09 38.4 0.1 3.1e-08 34.1 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF46827 - 2e-08 34.4 0.1 0.0057 16.9 0.0 2.8 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF46827 - 5e-08 32.6 0.0 0.0097 16.4 0.1 2.8 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF46827 - 0.00018 21.8 0.1 0.55 10.8 0.1 2.8 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF46827 - 0.0015 19.0 0.1 0.0075 16.8 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) DUF2481 PF10654.9 ORF46827 - 0.17 11.9 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) MENTAL PF10457.9 ORF46646 - 0.38 10.6 8.7 0.36 10.6 7.9 1.3 1 1 0 1 1 1 0 Cholesterol-capturing domain VWA PF00092.28 ORF45072 - 5.6e-06 26.7 0.0 6.9e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain TM231 PF10149.9 ORF44840 - 1e-13 51.3 0.4 1.1e-13 51.2 0.4 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 FtsK_alpha PF17854.1 ORF44840 - 0.072 13.2 0.1 0.088 13.0 0.1 1.3 1 0 0 1 1 1 0 FtsK alpha domain Toxin_12 PF07740.12 ORF44054 - 0.13 13.0 2.4 0.22 12.2 2.4 1.4 1 0 0 1 1 1 0 Ion channel inhibitory toxin FAM199X PF15814.5 ORF44054 - 5.1 6.1 9.0 5.9 5.9 9.0 1.2 1 0 0 1 1 1 0 Protein family FAM199X DUF3452 PF11934.8 ORF43087 - 0.054 13.1 4.0 0.2 11.2 4.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) Myb_DNA-bind_3 PF12776.7 ORF43087 - 0.092 13.7 0.8 0.23 12.5 0.2 1.8 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain PI3K_P85_iSH2 PF16454.5 ORF43087 - 0.34 10.5 7.0 3.3 7.3 0.4 2.2 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain ResIII PF04851.15 ORF43087 - 0.35 10.9 3.1 0.52 10.3 3.1 1.4 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Ribosomal_60s PF00428.19 ORF42810 - 2.4e-18 66.5 2.6 3.5e-18 66.0 2.6 1.2 1 0 0 1 1 1 1 60s Acidic ribosomal protein FoP_duplication PF13865.6 ORF42810 - 0.17 12.5 5.1 0.25 11.9 5.1 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 IATP PF04568.12 ORF42810 - 3.6 8.1 6.1 5.7 7.4 6.1 1.3 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP Pkinase PF00069.25 ORF4224 - 6.5e-20 71.6 0.1 1.1e-19 70.9 0.1 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4224 - 5.5e-12 45.5 0.0 6.1e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF4224 - 0.069 11.9 0.1 0.081 11.7 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase Ribosomal_L22e PF01776.17 ORF42169 - 1.4e-46 157.3 0.9 1.7e-46 157.1 0.9 1.0 1 0 0 1 1 1 1 Ribosomal L22e protein family PrgU PF09627.10 ORF42031 - 0.047 13.7 0.0 0.078 12.9 0.0 1.6 1 1 0 1 1 1 0 PrgU-like protein DUF547 PF04784.14 ORF42031 - 0.068 13.2 0.5 0.13 12.3 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF547 Peptidase_C62 PF12380.8 ORF409 - 0.0036 16.4 0.1 0.0037 16.4 0.1 1.1 1 0 0 1 1 1 1 Gill-associated viral 3C-like peptidase DUF4767 PF15983.5 ORF409 - 0.032 14.5 5.3 0.041 14.2 5.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4767) PMSI1 PF15322.6 ORF409 - 0.033 13.7 0.5 0.04 13.4 0.5 1.2 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative HflK_N PF12221.8 ORF39719 - 0.049 13.7 0.0 0.14 12.2 0.0 1.8 2 0 0 2 2 2 0 Bacterial membrane protein N terminal Rubis-subs-bind PF09273.11 ORF39143 - 3.2e-07 31.1 0.2 4.7e-07 30.5 0.2 1.2 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding YihI PF04220.12 ORF39143 - 0.02 14.6 0.3 0.029 14.1 0.3 1.1 1 0 0 1 1 1 0 Der GTPase activator (YihI) DUF92 PF01940.16 ORF38503 - 0.0044 16.5 0.0 0.0054 16.2 0.0 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF92 ABC_tran PF00005.27 ORF38313 - 2.7e-13 50.6 0.0 4.2e-13 50.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF38313 - 0.00037 20.0 0.0 0.00045 19.7 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF38313 - 0.00076 19.4 0.0 0.00077 19.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 ORF38313 - 0.0011 19.1 0.1 0.036 14.3 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit Poxvirus_B22R_N PF13169.6 ORF3748 - 0.004 17.6 1.9 0.011 16.2 1.9 1.7 1 1 0 1 1 1 1 Poxvirus B22R protein N-terminal ABC2_membrane_2 PF12679.7 ORF37237 - 0.017 14.5 8.0 0.017 14.4 8.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF898 PF05987.13 ORF37237 - 0.29 10.1 11.7 0.33 9.9 11.7 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF2070 PF09843.9 ORF37237 - 3.1 6.0 14.9 3.3 5.9 14.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ERGIC_N PF13850.6 ORF37186 - 0.015 15.6 0.2 0.02 15.2 0.2 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) UPF0126 PF03458.13 ORF36112 - 4.5e-23 80.9 5.8 4.5e-23 80.9 5.8 1.6 2 0 0 2 2 2 1 UPF0126 domain LrgB PF04172.16 ORF36112 - 0.0032 17.0 1.2 0.0046 16.5 1.2 1.3 1 0 0 1 1 1 1 LrgB-like family Glyco_transf_4 PF13439.6 ORF36112 - 0.0079 16.2 0.2 0.0087 16.1 0.2 1.1 1 0 0 1 1 1 1 Glycosyltransferase Family 4 ThrE PF06738.12 ORF36112 - 0.011 15.1 4.6 0.015 14.7 4.6 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF4203 PF13886.6 ORF36112 - 0.015 15.0 7.8 0.018 14.7 7.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4203) Ribosom_S12_S23 PF00164.25 ORF34571 - 4.7e-43 145.4 1.0 5.4e-43 145.2 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S12 PF17487.2 ORF34571 - 0.1 13.3 0.0 0.19 12.5 0.0 1.4 1 1 0 1 1 1 0 Ribosomal protein S12 Csm4_C PF17953.1 ORF32919 - 0.19 11.6 0.0 0.33 10.8 0.0 1.5 1 0 0 1 1 1 0 CRISPR Csm4 C-terminal domain DUF2433 PF10360.9 ORF32604 - 0.051 13.7 0.1 0.075 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) Vac7 PF12751.7 ORF32459 - 0.099 12.1 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 MT PF12777.7 ORF32349 - 2.4e-05 23.5 0.6 2.8e-05 23.3 0.6 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Rep_fac_C PF08542.11 ORF31820 - 6.6e-05 23.3 0.8 8.9e-05 22.8 0.8 1.2 1 0 0 1 1 1 1 Replication factor C C-terminal domain DUF5460 PF17544.2 ORF31820 - 0.0096 15.0 0.3 0.011 14.8 0.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5460) TetR_C_26 PF17934.1 ORF31820 - 0.067 13.5 0.0 0.081 13.3 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Yopt PF09467.10 ORF31820 - 0.099 12.7 0.1 0.19 11.8 0.1 1.4 1 0 0 1 1 1 0 Hypothetical protein Yopt SHIPPO-rpt PF07004.12 ORF30558 - 4.1e-10 40.1 7.7 0.0025 18.7 0.3 3.6 3 0 0 3 3 3 3 Sperm-tail PG-rich repeat SapA PF02199.15 ORF30335 - 0.01 16.1 2.1 0.41 11.0 0.2 2.5 2 0 0 2 2 2 0 Saposin A-type domain zf-RING_2 PF13639.6 ORF29865 - 7.8e-14 51.7 11.8 7.8e-14 51.7 11.8 2.5 3 0 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF29865 - 4.5e-10 39.1 7.7 4.5e-10 39.1 7.7 2.6 3 0 0 3 3 3 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF29865 - 7e-08 32.6 11.5 7e-08 32.6 11.5 2.3 3 1 0 3 3 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF29865 - 9.5e-08 31.8 15.3 2.1e-07 30.7 11.7 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF29865 - 8.5e-07 28.8 11.6 3.3e-06 26.9 9.1 2.3 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF29865 - 3.3e-06 27.0 8.6 3.9e-06 26.8 6.9 2.0 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF29865 - 4.4e-06 26.4 10.8 1.1e-05 25.2 10.8 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF29865 - 0.0001 22.3 6.5 0.0001 22.3 6.5 2.3 2 2 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF29865 - 0.00037 20.3 8.5 0.00037 20.3 8.5 1.8 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF29865 - 0.00038 20.3 9.5 0.00098 18.9 9.5 1.8 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF29865 - 0.0033 17.0 7.7 0.0033 17.0 7.7 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF29865 - 0.047 13.6 6.4 0.35 10.8 2.9 2.6 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-Nse PF11789.8 ORF29865 - 0.065 13.1 5.7 0.099 12.5 5.7 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Vps39_2 PF10367.9 ORF29865 - 0.14 12.6 6.4 0.066 13.7 2.2 2.0 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 2 FANCL_C PF11793.8 ORF29865 - 1 9.6 12.4 1.5 9.0 8.2 3.0 2 1 0 2 2 2 0 FANCL C-terminal domain zf-C3HC4_4 PF15227.6 ORF29865 - 2.5 8.3 11.2 22 5.3 11.4 2.4 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-C3H2C3 PF17122.5 ORF29865 - 3.2 7.9 10.7 0.63 10.1 3.4 3.0 3 1 0 3 3 3 0 Zinc-finger zf-RING-like PF08746.11 ORF29865 - 3.4 8.0 12.6 0.52 10.7 3.2 2.6 2 1 0 2 2 2 0 RING-like domain RINGv PF12906.7 ORF29865 - 6.3 7.0 16.9 0.55 10.4 11.0 2.2 2 0 0 2 2 2 0 RING-variant domain Cytochrom_B559 PF00283.19 ORF29480 - 2.8e-14 52.3 5.4 4.6e-14 51.6 5.4 1.4 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits TRSP PF12500.8 ORF29480 - 0.052 13.4 0.1 0.067 13.1 0.1 1.2 1 0 0 1 1 1 0 TRSP domain C terminus to PRTase_2 Gp_dh_N PF00044.24 ORF2816 - 0.15 12.4 0.1 0.2 12.0 0.1 1.3 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HATPase_c PF02518.26 ORF27958 - 4.4e-14 52.9 0.4 6.2e-14 52.5 0.4 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4913 PF16259.5 ORF27512 - 0.0048 16.9 0.5 0.0066 16.5 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4913) TPR_1 PF00515.28 ORF27512 - 0.14 12.0 0.2 0.69 9.8 0.1 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat NAD_synthase PF02540.17 ORF26807 - 7.9e-42 143.0 0.0 9e-42 142.9 0.0 1.0 1 0 0 1 1 1 1 NAD synthase DUSP PF06337.12 ORF26691 - 1e-07 32.5 0.1 1.4e-07 32.0 0.1 1.3 1 0 0 1 1 1 1 DUSP domain RseA_N PF03872.13 ORF26691 - 0.14 12.7 0.0 0.2 12.2 0.0 1.2 1 0 0 1 1 1 0 Anti sigma-E protein RseA, N-terminal domain Ank_5 PF13857.6 ORF26191 - 5.2e-19 68.1 0.7 5.7e-09 36.1 0.1 3.9 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF26191 - 2.2e-18 66.6 0.0 6.9e-16 58.6 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF26191 - 1.8e-14 53.9 0.1 1.4e-07 31.9 0.0 3.0 1 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF26191 - 2.8e-12 46.5 0.5 0.0057 17.0 0.0 4.0 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF26191 - 8e-12 44.3 0.0 0.031 14.8 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat DUF3152 PF11350.8 ORF26181 - 0.23 11.1 1.5 1.7 8.3 0.2 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3152) Tox-GHH PF15636.6 ORF25165 - 0.076 13.0 1.3 0.52 10.3 0.1 2.1 1 1 1 2 2 2 0 GHH signature containing HNH/Endo VII superfamily nuclease toxin DUF2606 PF10794.9 ORF24774 - 0.03 14.1 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) Mntp PF02659.15 ORF24774 - 0.058 13.1 3.8 0.16 11.8 2.2 1.9 2 0 0 2 2 2 0 Putative manganese efflux pump Phe_hydrox_dim PF07976.12 ORF24722 - 0.0013 18.7 0.6 0.0015 18.6 0.6 1.0 1 0 0 1 1 1 1 Phenol hydroxylase, C-terminal dimerisation domain She9_MDM33 PF05546.11 ORF24369 - 0.011 15.5 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF24369 - 0.13 12.2 5.3 0.7 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF24369 - 0.27 11.4 6.3 0.49 10.6 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger Pkinase PF00069.25 ORF2428 - 3.1e-36 125.1 0.1 3.7e-36 124.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF2428 - 3.5e-21 75.6 0.0 3.7e-21 75.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF2428 - 0.00012 21.5 0.0 0.00014 21.3 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF2428 - 0.044 13.4 0.0 0.048 13.3 0.0 1.3 1 1 0 1 1 1 0 RIO1 family APH PF01636.23 ORF2428 - 0.049 13.5 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF2428 - 0.068 12.1 0.1 0.072 12.0 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain FliD_N PF02465.18 ORF24181 - 0.0069 17.0 1.2 0.0089 16.7 1.2 1.2 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus bZIP_1 PF00170.21 ORF24181 - 0.019 15.0 6.1 0.032 14.3 6.1 1.3 1 0 0 1 1 1 0 bZIP transcription factor DivIC PF04977.15 ORF24181 - 0.11 12.2 2.0 0.17 11.7 2.0 1.3 1 0 0 1 1 1 0 Septum formation initiator EMP24_GP25L PF01105.24 ORF24181 - 0.94 9.4 3.8 1.7 8.5 3.8 1.4 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD DEPP PF15343.6 ORF23293 - 0.18 11.9 4.1 0.24 11.5 4.1 1.2 1 0 0 1 1 1 0 Decidual protein induced by progesterone family IBR PF01485.21 ORF21606 - 0.0017 18.5 4.7 0.008 16.4 0.3 2.3 2 0 0 2 2 2 2 IBR domain, a half RING-finger domain Plant_zn_clust PF10533.9 ORF20698 - 3.2 7.8 8.6 7.7 6.6 5.3 2.3 2 0 0 2 2 2 0 Plant zinc cluster domain PAN_4 PF14295.6 ORF1998 - 0.0003 20.6 0.6 0.00079 19.3 0.1 1.8 2 0 0 2 2 2 1 PAN domain PAN_1 PF00024.26 ORF1998 - 0.0025 17.7 0.2 0.0041 17.0 0.2 1.4 1 0 0 1 1 1 1 PAN domain PfkB PF00294.24 ORF1998 - 0.12 11.7 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 pfkB family carbohydrate kinase Phage_term_smal PF05944.12 ORF19626 - 0.1 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Phage small terminase subunit HlyD_D23 PF16576.5 ORF19509 - 0.14 11.3 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion PsiA PF06952.11 ORF18794 - 0.0067 15.7 0.0 0.0068 15.7 0.0 1.2 1 0 0 1 1 1 1 PsiA protein DUF2076 PF09849.9 ORF18754 - 0.93 9.5 20.2 2 8.4 20.2 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Homeodomain PF00046.29 ORF18620 - 1.2e-05 25.1 0.2 1.9e-05 24.4 0.2 1.4 1 0 0 1 1 1 1 Homeodomain RhoGEF67_u2 PF16614.5 ORF18620 - 0.14 12.3 0.1 6.9 6.8 0.1 2.1 2 0 0 2 2 2 0 Unstructured region two on RhoGEF 6 and 7 RE_XcyI PF09571.10 ORF17016 - 0.039 13.2 0.0 0.051 12.8 0.0 1.1 1 0 0 1 1 1 0 XcyI restriction endonuclease SLX9 PF15341.6 ORF1585 - 3.5e-06 27.4 18.2 4.1e-06 27.2 18.2 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein SLX9 YjbH PF06082.11 ORF1585 - 0.11 11.3 3.3 0.11 11.2 3.3 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH HSP70 PF00012.20 ORF1585 - 2.7 6.1 15.6 3 5.9 15.6 1.0 1 0 0 1 1 1 0 Hsp70 protein SHS2_FTSA PF02491.20 ORF1505 - 0.027 14.8 2.3 0.03 14.7 0.3 2.0 3 0 0 3 3 3 0 SHS2 domain inserted in FTSA DUF2706 PF10913.8 ORF14650 - 0.11 12.3 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2706) zf_UBZ PF18439.1 ORF14480 - 2.9e-06 26.7 1.6 5.3e-06 25.9 1.6 1.4 1 0 0 1 1 1 1 Ubiquitin-Binding Zinc Finger zf-C2HE PF16278.5 ORF14480 - 0.00021 21.7 2.0 0.00029 21.2 2.0 1.3 1 0 0 1 1 1 1 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2 PF00096.26 ORF14480 - 0.023 15.1 4.3 0.023 15.1 4.3 2.0 2 0 0 2 2 2 0 Zinc finger, C2H2 type RrnaAD PF00398.20 ORF14480 - 0.059 12.4 0.0 0.08 12.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase zf_C2H2_ZHX PF18387.1 ORF14480 - 0.49 10.1 4.8 1.7 8.3 4.9 1.7 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain DUF5497 PF17601.2 ORF13788 - 0.052 13.9 1.2 0.5 10.7 0.2 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5497) DUF2897 PF11446.8 ORF13529 - 0.46 10.4 3.9 11 6.0 2.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2897) PMP1_2 PF08114.11 ORF13502 - 0.03 14.0 0.3 0.048 13.4 0.3 1.3 1 0 0 1 1 1 0 ATPase proteolipid family NIR_SIR PF01077.22 ORF13502 - 0.072 12.6 0.0 0.086 12.3 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain GST_C_3 PF14497.6 ORF13218 - 5.4e-10 39.3 0.3 7.1e-10 39.0 0.3 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF13218 - 0.00036 20.7 0.0 0.00055 20.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Actin_micro PF17003.5 ORF13218 - 0.0098 15.1 1.8 0.077 12.2 0.1 2.0 1 1 0 2 2 2 1 Putative actin-like family DUF1611 PF07755.11 ORF12557 - 0.08 12.2 0.0 0.087 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain ACT_6 PF13740.6 ORF12557 - 0.13 12.2 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 ACT domain DUF3909 PF13077.6 ORF12159 - 0.085 13.0 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3909) Ank_5 PF13857.6 ORF12071 - 1.5e-05 25.1 0.0 2.3e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF12071 - 0.0028 18.0 0.0 0.0066 16.9 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeat Ank_4 PF13637.6 ORF12071 - 0.01 16.4 0.1 0.69 10.6 0.0 2.0 1 1 2 3 3 3 0 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF12071 - 0.015 15.8 0.0 0.019 15.6 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank PF00023.30 ORF12071 - 0.2 12.1 0.0 0.38 11.3 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeat DUF4186 PF13811.6 ORF11540 - 0.069 13.2 1.4 0.092 12.8 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) IBR PF01485.21 ORF112026 - 0.0017 18.5 4.7 0.008 16.4 0.3 2.3 2 0 0 2 2 2 2 IBR domain, a half RING-finger domain TetR_C_33 PF13305.6 ORF112007 - 0.016 15.9 0.3 0.028 15.2 0.3 1.4 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Vps54 PF07928.12 ORF111724 - 0.12 12.9 0.0 0.18 12.2 0.0 1.2 1 0 0 1 1 1 0 Vps54-like protein 3Beta_HSD PF01073.19 ORF111487 - 5.8e-15 55.0 0.1 6.6e-15 54.9 0.1 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF111487 - 8.7e-12 45.0 0.2 1e-11 44.8 0.2 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 ORF111487 - 2.5e-06 26.9 0.2 2.2e-05 23.7 0.1 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF111487 - 4.7e-06 26.0 0.1 5.4e-06 25.8 0.1 1.0 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF111487 - 7.1e-05 22.8 0.0 8.5e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF111487 - 0.00026 20.5 0.1 0.00031 20.3 0.1 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 ORF111487 - 0.1 11.7 0.4 0.14 11.2 0.4 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain KR PF08659.10 ORF111487 - 0.13 12.2 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 KR domain DUF3474 PF11960.8 ORF111453 - 1.1 9.4 6.1 0.65 10.2 0.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3474) EAL PF00563.20 ORF1107 - 7.2e-34 117.3 0.0 9.9e-34 116.9 0.0 1.1 1 0 0 1 1 1 1 EAL domain DUF871 PF05913.11 ORF1107 - 0.072 12.3 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF871) Hom_end PF05204.14 ORF1107 - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Homing endonuclease CAP_N PF01213.19 ORF106494 - 2.3 7.6 5.8 2.8 7.3 5.8 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal TPR_1 PF00515.28 ORF106382 - 0.0055 16.5 0.3 0.031 14.1 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF106382 - 0.017 15.2 0.3 0.072 13.2 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat PSS PF03034.15 ORF106382 - 0.032 14.0 0.3 0.041 13.6 0.3 1.1 1 0 0 1 1 1 0 Phosphatidyl serine synthase ANAPC3 PF12895.7 ORF106382 - 0.045 14.0 0.2 0.076 13.3 0.2 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_3 PF07720.12 ORF106382 - 0.086 12.9 3.7 0.2 11.7 0.2 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF106382 - 0.09 12.8 0.7 1.2 9.3 0.1 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF106382 - 0.17 12.6 0.0 0.25 12.0 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TMEM190 PF15431.6 ORF105743 - 0.13 12.4 2.3 0.16 12.2 1.8 1.4 1 1 0 1 1 1 0 Transmembrane protein 190 EZH2_WD-Binding PF11616.8 ORF105743 - 8.3 6.6 14.4 2.6 8.2 0.2 3.8 3 1 1 4 4 4 0 WD repeat binding protein EZH2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks187.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks187.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks187.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks187.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EF-hand_1 PF00036.32 ORF104141 - 1.3e-11 43.2 4.3 1.2e-06 27.6 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF104141 - 1.4e-11 43.3 4.0 4.1e-06 26.3 0.5 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF104141 - 7.5e-11 42.3 7.6 1.7e-10 41.2 6.0 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF104141 - 0.00024 20.9 7.6 0.074 12.9 0.5 3.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF104141 - 0.0039 16.6 5.5 0.037 13.5 0.7 2.4 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF104141 - 0.0064 16.8 2.0 0.081 13.3 0.2 2.1 1 1 1 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF104141 - 0.019 14.8 3.8 0.14 12.0 0.5 2.2 2 0 0 2 2 2 0 EF hand EF-hand_9 PF14658.6 ORF104141 - 0.041 14.2 0.4 0.063 13.6 0.4 1.3 1 0 0 1 1 1 0 EF-hand domain Endopep_inhib PF16800.5 ORF103952 - 0.024 14.6 0.7 0.024 14.6 0.7 1.4 1 1 0 1 1 1 0 IseA DL-endopeptidase inhibitor Pkinase PF00069.25 ORF103375 - 5.7e-27 94.7 2.0 6.2e-27 94.6 2.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF103375 - 1.7e-17 63.6 0.4 1.9e-17 63.4 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF103375 - 0.00047 19.2 0.4 0.00048 19.2 0.4 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF103375 - 0.00096 18.8 0.1 0.0013 18.4 0.1 1.2 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 ORF103375 - 0.0015 17.9 0.1 0.0023 17.3 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF103375 - 0.0016 18.4 0.1 0.019 14.9 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF103375 - 0.0018 17.2 0.1 0.0022 16.9 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF103375 - 0.0018 17.7 0.2 0.0044 16.4 0.1 1.6 1 1 0 2 2 2 1 Kinase-like DUF975 PF06161.11 ORF102677 - 0.27 11.0 9.2 0.25 11.1 1.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF975) DHHC PF01529.20 ORF102677 - 4.3 7.4 7.3 4.8 7.3 6.5 1.5 1 1 0 1 1 1 0 DHHC palmitoyltransferase WD40 PF00400.32 ORF102498 - 5e-06 27.1 0.1 0.029 15.3 0.0 2.7 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF102498 - 0.015 15.6 0.0 0.04 14.2 0.0 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Hep_core_N PF08290.11 ORF102412 - 1.3 9.0 4.2 0.57 10.2 0.9 2.0 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger Cytochrom_B559 PF00283.19 ORF101857 - 2.8e-14 52.3 5.4 4.6e-14 51.6 5.4 1.4 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits TRSP PF12500.8 ORF101857 - 0.052 13.4 0.1 0.067 13.1 0.1 1.2 1 0 0 1 1 1 0 TRSP domain C terminus to PRTase_2 PhoLip_ATPase_C PF16212.5 ORF100572 - 0.00032 20.5 8.6 0.00036 20.4 8.6 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal YL1_C PF08265.11 ORF10005 - 0.0056 16.4 0.0 0.009 15.8 0.0 1.4 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain Imm32 PF15566.6 ORF10005 - 0.14 12.0 0.3 0.28 11.0 0.3 1.5 1 0 0 1 1 1 0 Immunity protein 32 DUF3289 PF11692.8 NODE_50278_length_367_cov_1.225904_g42380_i0forward_frame_1 - 1e-24 87.6 0.1 1.1e-24 87.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3289) DUF3980 PF13140.6 NODE_50277_length_367_cov_1.361446_g42379_i0reverse_frame_1 - 0.031 14.7 0.5 0.059 13.8 0.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3980) HNOB PF07700.15 NODE_50276_length_367_cov_1.379518_g42378_i0reverse_frame_1 - 0.0022 17.9 0.5 0.0029 17.6 0.5 1.1 1 0 0 1 1 1 1 Haem-NO-binding Myosin_tail_1 PF01576.19 NODE_50276_length_367_cov_1.379518_g42378_i0forward_frame_1 - 0.0029 15.5 3.9 0.0034 15.3 3.9 1.0 1 0 0 1 1 1 1 Myosin tail TMF_DNA_bd PF12329.8 NODE_50276_length_367_cov_1.379518_g42378_i0forward_frame_1 - 0.033 14.2 11.9 0.056 13.5 11.9 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding KELK PF15796.5 NODE_50276_length_367_cov_1.379518_g42378_i0forward_frame_1 - 0.042 14.3 5.1 0.06 13.8 5.1 1.3 1 0 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Spectrin PF00435.21 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.03 14.8 0.7 0.066 13.7 0.7 1.8 1 1 0 1 1 1 0 Spectrin repeat INT_SG_DDX_CT_C PF15300.6 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.093 12.5 0.0 2 8.3 0.0 2.5 3 0 0 3 3 3 0 INTS6/SAGE1/DDX26B/CT45 C-terminus Hemagglutinin PF00509.18 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.14 10.5 2.6 0.15 10.4 2.6 1.1 1 0 0 1 1 1 0 Haemagglutinin NPV_P10 PF05531.12 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.2 12.1 1.8 0.5 10.9 0.8 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DASH_Dam1 PF08653.10 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.33 10.8 4.7 8.8 6.2 0.2 3.0 2 1 1 3 3 3 0 DASH complex subunit Dam1 NblA PF04485.12 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_1 - 0.63 10.5 4.8 1.2 9.6 4.8 1.4 1 0 0 1 1 1 0 Phycobilisome degradation protein nblA Myc_target_1 PF15179.6 NODE_50265_length_367_cov_1.915663_g42367_i0reverse_frame_1 - 0.031 14.2 2.6 0.038 13.9 2.6 1.1 1 0 0 1 1 1 0 Myc target protein 1 Phage_Nu1 PF07471.12 NODE_50265_length_367_cov_1.915663_g42367_i0reverse_frame_1 - 0.031 14.0 0.2 0.035 13.9 0.2 1.0 1 0 0 1 1 1 0 Phage DNA packaging protein Nu1 Xan_ur_permease PF00860.20 NODE_50260_length_367_cov_2.177711_g42362_i0forward_frame_1 - 1.1e-06 27.7 12.2 1.2e-06 27.4 12.2 1.0 1 0 0 1 1 1 1 Permease family Kinesin PF00225.23 NODE_50253_length_367_cov_2.481928_g42355_i0reverse_frame_1 - 0.00019 20.5 0.3 0.00033 19.7 0.2 1.3 1 1 0 1 1 1 1 Kinesin motor domain TelA PF05816.11 NODE_50246_length_367_cov_5.978916_g31470_i1forward_frame_1 - 0.0036 16.4 1.2 0.004 16.3 1.2 1.3 1 0 0 1 1 1 1 Toxic anion resistance protein (TelA) DUF3323 PF11796.8 NODE_50246_length_367_cov_5.978916_g31470_i1forward_frame_1 - 0.0043 17.0 0.9 0.006 16.5 0.9 1.2 1 0 0 1 1 1 1 Protein of unknown function N-terminus (DUF3323) TT_ORF2 PF02957.15 NODE_50245_length_367_cov_9.475904_g42348_i0forward_frame_1 - 0.074 14.0 0.9 0.1 13.5 0.9 1.3 1 0 0 1 1 1 0 TT viral ORF2 SUA5 PF03481.13 NODE_50244_length_367_cov_19.355422_g42347_i0forward_frame_1 - 0.012 16.2 0.0 0.016 15.8 0.0 1.1 1 0 0 1 1 1 0 Putative GTP-binding controlling metal-binding V-ATPase_H_N PF03224.14 NODE_50243_length_367_cov_34.256024_g42346_i0reverse_frame_1 - 0.015 14.6 0.6 0.017 14.4 0.6 1.1 1 0 0 1 1 1 0 V-ATPase subunit H TMA7 PF09072.10 NODE_50242_length_367_cov_44.210843_g42345_i0forward_frame_1 - 1e-05 26.3 16.8 1e-05 26.3 16.8 2.5 2 1 0 2 2 2 1 Translation machinery associated TMA7 Bmt2 PF11968.8 NODE_50234_length_367_cov_66.168675_g42337_i0reverse_frame_1 - 0.054 13.3 0.4 0.07 13.0 0.4 1.1 1 0 0 1 1 1 0 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 MPC PF03650.13 NODE_50234_length_367_cov_66.168675_g42337_i0forward_frame_1 - 3.6e-07 30.3 0.1 4.5e-07 30.0 0.1 1.0 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers Pox_A32 PF04665.12 NODE_50219_length_367_cov_92.216867_g42322_i0forward_frame_1 - 0.0081 15.6 0.3 0.01 15.3 0.3 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein R3H PF01424.22 NODE_50216_length_367_cov_94.900602_g42319_i0reverse_frame_1 - 4.2e-07 29.8 0.0 6.7e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 R3H domain PBP1_TM PF14812.6 NODE_50216_length_367_cov_94.900602_g42319_i0reverse_frame_1 - 0.0085 16.4 6.5 0.0085 16.4 6.5 1.7 1 1 1 2 2 2 1 Transmembrane domain of transglycosylase PBP1 at N-terminal FAM176 PF14851.6 NODE_50216_length_367_cov_94.900602_g42319_i0reverse_frame_1 - 0.075 12.7 0.5 0.099 12.3 0.5 1.3 1 0 0 1 1 1 0 FAM176 family PhrC_PhrF PF11131.8 NODE_50215_length_367_cov_99.391566_g42318_i0reverse_frame_1 - 0.18 11.4 3.5 0.17 11.5 1.8 1.8 2 0 0 2 2 2 0 Rap-phr extracellular signalling Mcp5_PH PF12814.7 NODE_50209_length_367_cov_117.900602_g42312_i0reverse_frame_1 - 0.00097 19.2 0.6 0.0012 19.0 0.6 1.1 1 0 0 1 1 1 1 Meiotic cell cortex C-terminal pleckstrin homology DIM PF08194.12 NODE_50209_length_367_cov_117.900602_g42312_i0forward_frame_1 - 0.24 11.6 3.7 0.57 10.4 3.7 1.6 1 0 0 1 1 1 0 DIM protein ABC_export PF16962.5 NODE_50200_length_367_cov_3293.250000_g36700_i3reverse_frame_1 - 0.0076 14.7 2.5 0.0092 14.5 2.5 1.1 1 0 0 1 1 1 1 Putative ABC exporter FMO-like PF00743.19 NODE_50195_length_368_cov_1.561562_g42301_i0reverse_frame_1 - 0.077 11.4 0.1 0.091 11.2 0.1 1.0 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Thg1 PF04446.12 NODE_50194_length_368_cov_1.612613_g42300_i0forward_frame_1 - 0.091 12.8 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 tRNAHis guanylyltransferase LRR_4 PF12799.7 NODE_50191_length_368_cov_1.795796_g42297_i0reverse_frame_1 - 0.012 16.1 4.1 2.6 8.6 0.0 3.2 2 1 1 3 3 3 0 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 NODE_50191_length_368_cov_1.795796_g42297_i0reverse_frame_1 - 0.47 10.6 2.6 6.4 7.1 0.3 3.1 3 0 0 3 3 3 0 Leucine Rich repeat LRR_1 PF00560.33 NODE_50191_length_368_cov_1.795796_g42297_i0reverse_frame_1 - 1.3 9.8 5.8 7 7.6 0.7 3.2 3 1 0 3 3 3 0 Leucine Rich Repeat COX2-transmemb PF09125.10 NODE_50189_length_368_cov_1.966967_g42295_i0forward_frame_1 - 0.15 11.8 0.3 0.15 11.8 0.3 2.0 2 1 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane Cys_rich_CPXG PF14255.6 NODE_50186_length_368_cov_2.249249_g42292_i0reverse_frame_1 - 0.01 15.7 0.2 0.019 14.9 0.2 1.4 1 0 0 1 1 1 0 Cysteine-rich CPXCG NDK PF00334.19 NODE_50184_length_368_cov_2.405405_g42290_i0reverse_frame_1 - 5.3e-05 23.3 0.0 8.9e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Nucleoside diphosphate kinase EcsC PF12787.7 NODE_50184_length_368_cov_2.405405_g42290_i0forward_frame_1 - 0.026 14.2 0.0 0.031 13.9 0.0 1.0 1 0 0 1 1 1 0 EcsC protein family DBD_Tnp_Mut PF03108.15 NODE_50176_length_368_cov_3.750751_g42282_i0reverse_frame_1 - 0.031 14.3 0.1 0.062 13.3 0.1 1.5 1 0 0 1 1 1 0 MuDR family transposase Rubis-subs-bind PF09273.11 NODE_50168_length_368_cov_50.747748_g42274_i0reverse_frame_1 - 0.0036 18.0 0.1 0.0052 17.5 0.1 1.3 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding ERK-JNK_inhib PF15002.6 NODE_50165_length_368_cov_64.231231_g42271_i0reverse_frame_1 - 0.94 9.1 14.7 0.96 9.1 14.7 1.2 1 1 0 1 1 1 0 ERK and JNK pathways, inhibitor DUF1298 PF06974.13 NODE_50163_length_368_cov_66.477477_g42269_i0reverse_frame_1 - 3.9e-09 36.6 0.0 4.5e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Toxin-deaminase PF14424.6 NODE_50154_length_368_cov_80.684685_g42260_i0forward_frame_1 - 3e-07 30.6 0.0 4e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases SNAD4 PF18750.1 NODE_50154_length_368_cov_80.684685_g42260_i0forward_frame_1 - 0.0031 17.6 0.0 0.0035 17.4 0.0 1.1 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 LysR_substrate PF03466.20 NODE_50154_length_368_cov_80.684685_g42260_i0forward_frame_1 - 0.0052 16.2 0.0 0.009 15.4 0.0 1.4 1 0 0 1 1 1 1 LysR substrate binding domain NAD1 PF18778.1 NODE_50154_length_368_cov_80.684685_g42260_i0forward_frame_1 - 0.0096 16.0 0.0 0.011 15.9 0.0 1.1 1 0 0 1 1 1 1 Novel AID APOBEC clade 1 APOBEC2 PF18772.1 NODE_50154_length_368_cov_80.684685_g42260_i0forward_frame_1 - 0.015 15.4 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 APOBEC2 APOBEC3 PF18771.1 NODE_50154_length_368_cov_80.684685_g42260_i0forward_frame_1 - 0.017 15.2 0.0 0.021 15.0 0.0 1.1 1 0 0 1 1 1 0 APOBEC3 APOBEC_N PF08210.11 NODE_50154_length_368_cov_80.684685_g42260_i0forward_frame_1 - 0.036 14.0 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 APOBEC-like N-terminal domain APOBEC4 PF18775.1 NODE_50154_length_368_cov_80.684685_g42260_i0forward_frame_1 - 0.071 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 APOBEC4 Caskin1-CID PF16600.5 NODE_50152_length_368_cov_84.612613_g42258_i0reverse_frame_1 - 3.3 8.4 6.9 6.7 7.4 6.9 1.6 1 1 0 1 1 1 0 Caskin1 CASK-interaction domain DUF4222 PF13973.6 NODE_50150_length_368_cov_86.525526_g42256_i0forward_frame_1 - 0.14 11.7 0.7 0.24 11.0 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4222) Toxin_3 PF00537.18 NODE_50145_length_368_cov_90.402402_g42251_i0reverse_frame_1 - 0.039 14.1 0.1 0.063 13.5 0.1 1.3 1 0 0 1 1 1 0 Scorpion toxin-like domain DUF2735 PF10931.8 NODE_50145_length_368_cov_90.402402_g42251_i0forward_frame_1 - 0.055 14.2 0.7 0.14 12.9 0.7 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2735) UL97 PF06734.12 NODE_50129_length_368_cov_2943.870871_g42235_i0forward_frame_1 - 0.099 12.5 0.2 0.12 12.2 0.2 1.2 1 0 0 1 1 1 0 UL97 DUF645 PF04875.12 NODE_50120_length_369_cov_1.332335_g42226_i0reverse_frame_1 - 0.059 13.4 0.0 0.098 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF645 CytochromB561_N PF09786.9 NODE_50116_length_369_cov_1.538922_g42222_i0reverse_frame_1 - 0.00042 19.4 0.1 0.00042 19.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome B561, N terminal Flu_PB2 PF00604.17 NODE_50116_length_369_cov_1.538922_g42222_i0reverse_frame_1 - 0.096 10.6 1.0 0.11 10.5 1.0 1.1 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PB2 PK PF00224.21 NODE_50115_length_369_cov_1.574850_g42221_i0reverse_frame_1 - 9.4e-11 41.2 0.2 1.1e-10 41.0 0.2 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PGP_phosphatase PF09419.10 NODE_50114_length_369_cov_1.646707_g42220_i0reverse_frame_1 - 0.085 12.5 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase Polysacc_synt_C PF14667.6 NODE_50114_length_369_cov_1.646707_g42220_i0forward_frame_1 - 0.0054 16.8 9.0 0.0068 16.5 9.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain VPS11_C PF12451.8 NODE_50113_length_369_cov_1.739521_g42219_i0forward_frame_1 - 0.14 12.4 0.0 0.41 10.9 0.0 1.8 2 0 0 2 2 2 0 Vacuolar protein sorting protein 11 C terminal SKN1 PF03935.15 NODE_50110_length_369_cov_1.847305_g42216_i0forward_frame_1 - 0.11 10.8 0.0 0.14 10.5 0.0 1.1 1 0 0 1 1 1 0 Beta-glucan synthesis-associated protein (SKN1) POT1 PF02765.17 NODE_50106_length_369_cov_2.131737_g42212_i0forward_frame_1 - 0.056 13.3 0.0 0.068 13.0 0.0 1.2 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 Thiol_cytolysin PF01289.19 NODE_50106_length_369_cov_2.131737_g42212_i0forward_frame_1 - 0.16 10.9 0.0 0.17 10.7 0.0 1.0 1 0 0 1 1 1 0 Thiol-activated cytolysin CDtoxinA PF03498.14 NODE_50098_length_369_cov_2.577844_g42204_i0reverse_frame_1 - 0.034 13.8 3.0 0.041 13.5 3.0 1.1 1 0 0 1 1 1 0 Cytolethal distending toxin A/C domain TAFH PF07531.14 NODE_50097_length_369_cov_2.646707_g42203_i0reverse_frame_1 - 0.044 13.9 0.1 0.18 11.9 0.1 1.8 1 1 1 2 2 2 0 NHR1 homology to TAF FAD_syn PF06574.12 NODE_50096_length_369_cov_2.646707_g42202_i0reverse_frame_1 - 0.00044 20.2 0.1 0.00056 19.8 0.1 1.2 1 0 0 1 1 1 1 FAD synthetase MBT PF02820.18 NODE_50096_length_369_cov_2.646707_g42202_i0forward_frame_1 - 0.085 13.2 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 mbt repeat SGL PF08450.12 NODE_50094_length_369_cov_3.167665_g42200_i0forward_frame_1 - 0.037 13.6 0.0 0.05 13.2 0.0 1.2 1 0 0 1 1 1 0 SMP-30/Gluconolactonase/LRE-like region DUF979 PF06166.12 NODE_50092_length_369_cov_3.736527_g42198_i0forward_frame_1 - 0.43 9.7 1.2 0.66 9.1 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF979) MpPF26 PF07666.11 NODE_50084_length_369_cov_51.709581_g42190_i0reverse_frame_1 - 0.00071 19.7 1.6 0.00094 19.3 1.6 1.1 1 0 0 1 1 1 1 M penetrans paralogue family 26 BORG_CEP PF14957.6 NODE_50076_length_369_cov_76.000000_g42182_i0reverse_frame_1 - 0.0063 17.7 0.0 0.0079 17.4 0.0 1.2 1 0 0 1 1 1 1 Cdc42 effector DUF2563 PF10817.8 NODE_50075_length_369_cov_76.473054_g42181_i0reverse_frame_1 - 0.031 14.9 0.0 0.04 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2563) ATP1G1_PLM_MAT8 PF02038.16 NODE_50073_length_369_cov_78.532934_g42179_i0forward_frame_1 - 0.078 12.4 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family Peptidase_C31 PF05410.13 NODE_50054_length_369_cov_445.419162_g42160_i0reverse_frame_1 - 0.5 10.5 3.7 1.2 9.3 0.4 2.1 1 1 1 2 2 2 0 Porcine arterivirus-type cysteine proteinase alpha ResB PF05140.14 NODE_50049_length_369_cov_2295.395210_g42155_i0reverse_frame_1 - 0.5 9.1 2.1 0.81 8.4 2.1 1.3 1 0 0 1 1 1 0 ResB-like family PAS_6 PF08348.11 NODE_50046_length_370_cov_1.325373_g42152_i0forward_frame_3 - 0.011 15.6 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 YheO-like PAS domain Inhibitor_Mig-6 PF11555.8 NODE_50042_length_370_cov_1.955224_g42148_i0reverse_frame_3 - 0.043 13.9 3.4 0.043 13.9 3.4 2.2 2 0 0 2 2 2 0 EGFR receptor inhibitor Mig-6 zf-C2H2_3 PF13878.6 NODE_50042_length_370_cov_1.955224_g42148_i0forward_frame_2 - 3.2 7.7 4.8 0.46 10.3 0.7 1.6 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO Bax1-I PF01027.20 NODE_50038_length_370_cov_2.110448_g42144_i0reverse_frame_2 - 3.3e-17 63.0 1.6 4.7e-17 62.5 1.6 1.2 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BIR PF00653.21 NODE_50037_length_370_cov_2.140299_g42143_i0reverse_frame_3 - 0.023 15.3 0.2 0.046 14.4 0.2 1.5 1 0 0 1 1 1 0 Inhibitor of Apoptosis domain EcoR124_C PF12008.8 NODE_50032_length_370_cov_2.295522_g42138_i0reverse_frame_2 - 0.022 14.4 0.7 0.046 13.4 0.5 1.6 2 0 0 2 2 2 0 Type I restriction and modification enzyme - subunit R C terminal DUF3854 PF12965.7 NODE_50032_length_370_cov_2.295522_g42138_i0reverse_frame_2 - 0.039 13.9 0.1 0.045 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) TypeIII_RM_meth PF12564.8 NODE_50027_length_370_cov_2.537313_g42133_i0forward_frame_2 - 0.0017 18.5 1.1 0.0031 17.6 1.1 1.5 1 0 0 1 1 1 1 Type III restriction/modification enzyme methylation subunit Viral_alk_exo PF01771.17 NODE_50026_length_370_cov_2.576119_g42132_i0reverse_frame_2 - 0.29 9.9 2.3 0.35 9.7 2.3 1.1 1 0 0 1 1 1 0 Viral alkaline exonuclease PaO PF08417.12 NODE_50026_length_370_cov_2.576119_g42132_i0forward_frame_3 - 0.12 12.6 0.2 0.22 11.7 0.0 1.6 2 0 0 2 2 2 0 Pheophorbide a oxygenase HNH_repeat PF18780.1 NODE_50022_length_370_cov_2.749254_g42128_i0forward_frame_2 - 0.47 10.3 0.3 0.47 10.3 0.3 1.7 2 0 0 2 2 2 0 Homing endonuclease repeat AAA_5 PF07728.14 NODE_50021_length_370_cov_2.829851_g42127_i0forward_frame_3 - 1.1e-16 61.1 0.0 1.4e-16 60.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 NODE_50021_length_370_cov_2.829851_g42127_i0forward_frame_3 - 0.011 15.7 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Na_Ca_ex PF01699.24 NODE_50016_length_370_cov_3.355224_g42122_i0reverse_frame_2 - 3.6e-10 40.0 3.5 5.2e-10 39.5 3.0 1.5 1 1 1 2 2 2 2 Sodium/calcium exchanger protein HisKA_7TM PF16927.5 NODE_50016_length_370_cov_3.355224_g42122_i0reverse_frame_2 - 0.012 15.7 1.0 0.019 15.0 1.0 1.3 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase Peptidase_C7 PF01830.18 NODE_50010_length_370_cov_3.964179_g42116_i0forward_frame_2 - 0.13 11.7 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 Peptidase C7 family DUF1943 PF09172.11 NODE_50003_length_370_cov_52.940299_g42109_i0reverse_frame_2 - 1.1 8.4 3.9 1 8.6 3.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) CDC45 PF02724.14 NODE_50003_length_370_cov_52.940299_g42109_i0reverse_frame_2 - 1.7 6.8 8.9 1.8 6.7 8.9 1.0 1 0 0 1 1 1 0 CDC45-like protein Rubredoxin_2 PF18073.1 NODE_50003_length_370_cov_52.940299_g42109_i0forward_frame_3 - 0.3 10.9 4.0 0.42 10.4 0.5 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain DUF903 PF06004.12 NODE_50002_length_370_cov_53.549254_g42108_i0forward_frame_3 - 0.11 12.4 0.6 0.16 11.9 0.6 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF903) Phage_int_SAM_2 PF12834.7 NODE_50002_length_370_cov_53.549254_g42108_i0forward_frame_3 - 0.11 13.2 0.0 0.18 12.5 0.0 1.4 1 0 0 1 1 1 0 Phage integrase, N-terminal Nodulin_late PF07127.11 NODE_49994_length_370_cov_88.095522_g42100_i0reverse_frame_3 - 0.054 13.8 1.3 0.054 13.8 1.3 2.2 2 0 0 2 2 2 0 Late nodulin protein AAA_32 PF13654.6 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.0012 17.7 6.7 0.0014 17.5 6.7 1.0 1 0 0 1 1 1 1 AAA domain F_actin_cap_B PF01115.17 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.034 13.8 0.4 0.034 13.8 0.4 1.6 2 0 0 2 2 2 0 F-actin capping protein, beta subunit FRP PF18032.1 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.076 13.6 2.2 8.9 7.0 0.2 2.2 1 1 0 2 2 2 0 Photoprotection regulator fluorescence recovery protein ATPase_2 PF01637.18 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.079 12.9 2.1 0.093 12.6 2.1 1.0 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DUF4085 PF13315.6 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.14 11.8 4.1 0.29 10.7 4.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4085) Tho2 PF11262.8 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.14 11.4 5.2 0.17 11.1 5.2 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF4239 PF14023.6 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.14 11.8 0.7 0.16 11.7 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) zf-CRD PF17979.1 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.17 12.0 1.9 0.25 11.4 1.9 1.5 1 1 0 1 1 1 0 Cysteine rich domain with multizinc binding regions MTBP_mid PF14919.6 NODE_49982_length_370_cov_148.776119_g42088_i0reverse_frame_3 - 0.034 13.4 0.3 0.043 13.0 0.3 1.1 1 0 0 1 1 1 0 MDM2-binding PA PF02225.22 NODE_49980_length_370_cov_186.898507_g42086_i0reverse_frame_3 - 5.1e-10 39.2 0.0 6.7e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 PA domain EPV_E5 PF08135.11 NODE_49980_length_370_cov_186.898507_g42086_i0forward_frame_3 - 0.17 12.3 8.3 0.31 11.4 8.3 1.5 1 0 0 1 1 1 0 Major transforming protein E5 family Herpes_UL43 PF05072.13 NODE_49976_length_370_cov_291.146269_g42082_i0reverse_frame_3 - 0.12 11.4 0.5 0.46 9.5 0.2 1.8 1 1 1 2 2 2 0 Herpesvirus UL43 protein Chitin_bind_1 PF00187.19 NODE_49976_length_370_cov_291.146269_g42082_i0reverse_frame_2 - 0.094 13.2 0.8 0.094 13.2 0.8 1.8 2 0 0 2 2 2 0 Chitin recognition protein COX2_TM PF02790.15 NODE_49975_length_370_cov_324.002985_g42081_i0reverse_frame_2 - 0.039 14.1 0.3 0.061 13.5 0.3 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain Orf78 PF06024.12 NODE_49975_length_370_cov_324.002985_g42081_i0reverse_frame_2 - 0.076 13.3 0.1 0.11 12.8 0.1 1.3 1 0 0 1 1 1 0 Orf78 (ac78) DUF5554 PF17709.1 NODE_49974_length_370_cov_503.949254_g42080_i0reverse_frame_3 - 0.14 12.3 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5554) DUF2448 PF10476.9 NODE_49965_length_371_cov_0.922619_g42071_i0reverse_frame_2 - 0.054 13.3 0.5 0.071 13.0 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2448) Mei4 PF13971.6 NODE_49965_length_371_cov_0.922619_g42071_i0forward_frame_3 - 0.0068 16.0 0.7 0.0068 16.0 0.7 1.1 1 0 0 1 1 1 1 Meiosis-specific protein Mei4 DUF2569 PF10754.9 NODE_49965_length_371_cov_0.922619_g42071_i0forward_frame_3 - 0.057 13.9 0.1 0.083 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) MFAP1 PF06991.11 NODE_49964_length_371_cov_1.318452_g42070_i0forward_frame_2 - 0.0089 15.9 6.3 0.01 15.7 6.3 1.1 1 0 0 1 1 1 1 Microfibril-associated/Pre-mRNA processing PIEZO PF15917.5 NODE_49964_length_371_cov_1.318452_g42070_i0forward_frame_2 - 0.05 13.1 3.5 0.053 13.0 3.5 1.0 1 0 0 1 1 1 0 Piezo DSL PF01414.19 NODE_49963_length_371_cov_1.565476_g42069_i0forward_frame_2 - 0.027 14.7 0.2 0.041 14.2 0.2 1.2 1 0 0 1 1 1 0 Delta serrate ligand Rubredoxin_C PF18267.1 NODE_49960_length_371_cov_1.848214_g42066_i0reverse_frame_2 - 0.033 14.1 0.0 0.05 13.5 0.0 1.3 1 0 0 1 1 1 0 Rubredoxin NAD+ reductase C-terminal domain SIN1 PF05422.12 NODE_49960_length_371_cov_1.848214_g42066_i0reverse_frame_2 - 0.2 12.2 0.0 0.22 12.1 0.0 1.0 1 0 0 1 1 1 0 Stress-activated map kinase interacting protein 1 (SIN1) DUF1599 PF07659.11 NODE_49960_length_371_cov_1.848214_g42066_i0forward_frame_3 - 0.15 12.6 0.0 0.29 11.6 0.0 1.5 1 0 0 1 1 1 0 Nucleotide modification associated domain 1 DegT_DnrJ_EryC1 PF01041.17 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 3.2e-43 148.4 0.0 3.7e-43 148.2 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SHMT PF00464.19 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 0.01 14.5 0.0 0.011 14.4 0.0 1.0 1 0 0 1 1 1 0 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 0.058 12.7 0.0 0.12 11.7 0.0 1.6 1 1 0 1 1 1 0 Beta-eliminating lyase SelA PF03841.13 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 0.12 11.3 0.0 0.14 11.1 0.0 1.3 1 0 0 1 1 1 0 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.19 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 0.17 10.8 0.0 0.23 10.4 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-V DUF4705 PF15788.5 NODE_49952_length_371_cov_2.261905_g42058_i0forward_frame_3 - 0.022 15.0 2.9 0.047 13.9 2.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4705) Ycf70 PF17382.2 NODE_49948_length_371_cov_2.544643_g42055_i0reverse_frame_2 - 0.059 13.8 0.2 0.085 13.3 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Xol-1_N PF09108.10 NODE_49942_length_371_cov_2.681548_g42049_i0forward_frame_2 - 0.08 12.8 0.6 0.095 12.6 0.6 1.1 1 0 0 1 1 1 0 Switch protein XOL-1, N-terminal rve PF00665.26 NODE_49937_length_371_cov_2.791667_g42044_i0reverse_frame_3 - 0.018 15.2 0.0 0.027 14.7 0.0 1.3 1 0 0 1 1 1 0 Integrase core domain UvrB PF12344.8 NODE_49937_length_371_cov_2.791667_g42044_i0reverse_frame_3 - 0.13 12.2 0.2 7.3 6.5 0.0 2.8 3 0 0 3 3 3 0 Ultra-violet resistance protein B MOR2-PAG1_C PF14225.6 NODE_49936_length_371_cov_2.875000_g42043_i0forward_frame_3 - 0.091 12.6 0.3 0.11 12.3 0.3 1.1 1 0 0 1 1 1 0 Cell morphogenesis C-terminal DUF1440 PF07274.12 NODE_49932_length_371_cov_3.821429_g42039_i0reverse_frame_2 - 2.5e-06 27.9 0.1 4.6e-06 27.0 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1440) AKAP28 PF14469.6 NODE_49932_length_371_cov_3.821429_g42039_i0forward_frame_2 - 0.064 13.0 0.2 0.072 12.9 0.2 1.2 1 0 0 1 1 1 0 28 kDa A-kinase anchor KIP1 PF07765.12 NODE_49929_length_371_cov_15.514881_g42036_i0reverse_frame_2 - 0.0066 16.6 2.5 0.01 15.9 2.5 1.5 1 0 0 1 1 1 1 KIP1-like protein Arf PF00025.21 NODE_49927_length_371_cov_19.919643_g42034_i0reverse_frame_3 - 1e-10 41.3 0.0 1.3e-10 41.0 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 NODE_49927_length_371_cov_19.919643_g42034_i0reverse_frame_3 - 0.0026 17.4 0.0 0.003 17.2 0.0 1.1 1 0 0 1 1 1 1 Ras family AGS_C PF18134.1 NODE_49924_length_371_cov_36.815476_g42031_i0reverse_frame_2 - 0.011 15.8 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain PIN PF01850.21 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_3 - 0.051 14.1 0.2 0.069 13.6 0.2 1.2 1 0 0 1 1 1 0 PIN domain DUF4781 PF16013.5 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.048 12.5 1.4 0.062 12.1 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) DUF3918 PF13056.6 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.33 10.6 5.5 1.8 8.3 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) DUF5516 PF17637.2 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.33 10.7 5.9 1.3 8.8 3.7 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF5516) HemX PF04375.14 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.74 9.0 2.3 0.46 9.7 0.1 1.6 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase TcdA_TcdB_pore PF12920.7 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.74 8.0 2.1 0.78 7.9 2.1 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain OAD_gamma PF04277.13 NODE_49923_length_371_cov_38.627976_g42030_i0forward_frame_3 - 0.065 13.8 0.2 0.089 13.4 0.2 1.1 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Herpes_UL73 PF03554.13 NODE_49923_length_371_cov_38.627976_g42030_i0forward_frame_2 - 0.32 11.0 6.0 0.079 13.0 2.6 1.7 1 1 1 2 2 2 0 UL73 viral envelope glycoprotein Atrophin-1 PF03154.15 NODE_49921_length_371_cov_43.142857_g42028_i0forward_frame_2 - 1.3 7.2 8.2 1.4 7.1 8.2 1.1 1 0 0 1 1 1 0 Atrophin-1 family Mannosyl_trans4 PF15971.5 NODE_49918_length_371_cov_53.235119_g42025_i0forward_frame_3 - 0.2 11.5 0.9 1.6 8.6 0.0 2.0 1 1 1 2 2 2 0 DolP-mannose mannosyltransferase DUF2527 PF10736.9 NODE_49917_length_371_cov_62.187500_g42024_i0reverse_frame_3 - 0.96 9.3 2.5 20 5.1 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) Adenine_glyco PF03352.13 NODE_49917_length_371_cov_62.187500_g42024_i0forward_frame_2 - 0.047 13.5 0.1 0.062 13.1 0.1 1.1 1 0 0 1 1 1 0 Methyladenine glycosylase RabGAP-TBC PF00566.18 NODE_49917_length_371_cov_62.187500_g42024_i0forward_frame_2 - 0.087 12.5 3.4 0.1 12.2 3.4 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Mito_carr PF00153.27 NODE_49914_length_371_cov_69.976190_g42021_i0reverse_frame_3 - 3.8e-18 65.2 0.0 5e-18 64.8 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein Methyltransf_29 PF03141.16 NODE_49909_length_371_cov_74.297619_g42016_i0reverse_frame_2 - 0.14 10.7 0.3 3.1 6.2 0.0 2.0 1 1 1 2 2 2 0 Putative S-adenosyl-L-methionine-dependent methyltransferase RCC1_2 PF13540.6 NODE_49909_length_371_cov_74.297619_g42016_i0reverse_frame_2 - 0.19 11.6 0.3 0.19 11.6 0.3 2.6 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat Pro_CA PF00484.19 NODE_49909_length_371_cov_74.297619_g42016_i0reverse_frame_2 - 0.19 12.0 1.3 12 6.2 0.1 2.4 1 1 1 2 2 2 0 Carbonic anhydrase DUF4423 PF14394.6 NODE_49908_length_371_cov_75.250000_g42015_i0reverse_frame_2 - 0.022 14.5 0.2 0.038 13.7 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) Phage_int_SAM_5 PF13102.6 NODE_49908_length_371_cov_75.250000_g42015_i0reverse_frame_2 - 0.1 12.9 3.6 0.19 12.1 0.5 2.3 1 1 1 2 2 2 0 Phage integrase SAM-like domain DUF1120 PF06551.12 NODE_49903_length_371_cov_79.764881_g42010_i0reverse_frame_3 - 0.074 13.2 0.0 0.095 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1120) Ost5 PF05251.12 NODE_49903_length_371_cov_79.764881_g42010_i0forward_frame_3 - 6.6e-05 23.1 1.4 9.6e-05 22.6 1.4 1.2 1 0 0 1 1 1 1 Oligosaccharyltransferase subunit 5 AmpE PF17113.5 NODE_49903_length_371_cov_79.764881_g42010_i0forward_frame_2 - 0.058 12.7 0.1 0.07 12.4 0.1 1.0 1 0 0 1 1 1 0 Regulatory signalling modulator protein AmpE HCNGP PF07818.13 NODE_49902_length_371_cov_80.502976_g42009_i0reverse_frame_3 - 6.8e-09 36.3 0.0 1.1e-08 35.7 0.0 1.3 1 0 0 1 1 1 1 HCNGP-like protein CART PF06373.11 NODE_49896_length_371_cov_123.764881_g42003_i0forward_frame_3 - 0.12 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) DUF3137 PF11335.8 NODE_49895_length_371_cov_130.809524_g42002_i0reverse_frame_2 - 0.31 11.0 5.8 0.59 10.1 1.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3137) Oxidored_q2 PF00420.24 NODE_49895_length_371_cov_130.809524_g42002_i0forward_frame_2 - 0.032 13.8 0.2 0.047 13.3 0.2 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TPR_17 PF13431.6 NODE_49890_length_371_cov_198.755952_g41997_i0reverse_frame_2 - 9.1e-10 38.2 0.6 0.031 14.6 0.1 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_49890_length_371_cov_198.755952_g41997_i0reverse_frame_2 - 9.6e-05 22.0 1.7 0.006 16.2 0.1 2.9 3 0 0 3 3 3 2 TPR repeat TPR_1 PF00515.28 NODE_49890_length_371_cov_198.755952_g41997_i0reverse_frame_2 - 0.018 14.8 5.0 5.9 6.9 0.1 4.8 5 0 0 5 5 5 0 Tetratricopeptide repeat MTABC_N PF16185.5 NODE_49890_length_371_cov_198.755952_g41997_i0forward_frame_2 - 0.03 13.8 0.8 0.037 13.5 0.8 1.1 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region ADIP PF11559.8 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 0.031 14.4 5.2 0.035 14.2 5.2 1.2 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding FlxA PF14282.6 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 0.23 11.5 19.0 4.9 7.2 19.0 2.1 1 1 0 1 1 1 0 FlxA-like protein DUF2968 PF11180.8 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 2.9 7.5 17.0 37 3.9 16.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2968) Swi5 PF07061.11 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 4 7.6 6.1 5.9 7.0 1.6 2.1 1 1 1 2 2 2 0 Swi5 DUF4763 PF15960.5 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 6.9 5.9 19.8 13 5.0 19.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4763) ART PF01129.18 NODE_49880_length_371_cov_407.059524_g41987_i0reverse_frame_3 - 0.0015 17.9 0.0 0.0023 17.3 0.0 1.3 1 1 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase DUF5542 PF17696.1 NODE_49880_length_371_cov_407.059524_g41987_i0reverse_frame_2 - 0.044 13.9 1.1 0.1 12.7 1.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5542) Cu-oxidase_4 PF02578.15 NODE_49879_length_371_cov_591.491071_g41986_i0reverse_frame_3 - 0.086 12.4 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Multi-copper polyphenol oxidoreductase laccase GATase1_like PF07090.11 NODE_49878_length_371_cov_966.500000_g41985_i0reverse_frame_3 - 0.022 14.2 0.0 0.026 14.0 0.0 1.1 1 0 0 1 1 1 0 Putative glutamine amidotransferase Carla_C4 PF01623.17 NODE_49877_length_371_cov_6102.461310_g41984_i0reverse_frame_3 - 0.0097 15.8 2.2 0.014 15.3 2.2 1.2 1 0 0 1 1 1 1 Carlavirus putative nucleic acid binding protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks188.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks188.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks188.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks188.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:02:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-met PF12874.7 NODE_49876_length_371_cov_16224.666667_g41983_i0forward_frame_2 - 0.32 11.5 2.1 11 6.5 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Ion_trans PF00520.31 NODE_49875_length_372_cov_1.183976_g41982_i0reverse_frame_3 - 1.3e-11 44.2 8.0 4.3e-08 32.7 2.9 2.1 2 0 0 2 2 2 2 Ion transport protein PLAC PF08686.11 NODE_49873_length_372_cov_1.400593_g41980_i0forward_frame_2 - 5.6 7.8 8.2 1.3 9.8 4.7 1.7 2 0 0 2 2 2 0 PLAC (protease and lacunin) domain Pkinase PF00069.25 NODE_49872_length_372_cov_1.424332_g41979_i0forward_frame_3 - 2.3e-15 56.7 0.0 2.9e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49872_length_372_cov_1.424332_g41979_i0forward_frame_3 - 2e-08 33.9 0.0 2.4e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DCX PF03607.17 NODE_49872_length_372_cov_1.424332_g41979_i0forward_frame_3 - 0.057 13.5 0.1 0.12 12.5 0.1 1.5 1 0 0 1 1 1 0 Doublecortin Chorion_2 PF03964.15 NODE_49866_length_372_cov_1.866469_g41973_i0reverse_frame_2 - 0.086 13.7 0.2 0.1 13.4 0.2 1.2 1 0 0 1 1 1 0 Chorion family 2 TFIIA PF03153.13 NODE_49863_length_372_cov_2.151335_g41970_i0reverse_frame_3 - 6.3 6.7 11.2 7 6.5 11.2 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit AMNp_N PF10423.9 NODE_49861_length_372_cov_2.225519_g41968_i0reverse_frame_2 - 5.6e-10 39.1 0.0 7.5e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Bacterial AMP nucleoside phosphorylase N-terminus Ig_4 PF16680.5 NODE_49861_length_372_cov_2.225519_g41968_i0reverse_frame_2 - 0.038 14.3 0.6 0.067 13.5 0.6 1.4 1 0 0 1 1 1 0 T-cell surface glycoprotein CD3 delta chain DUF2680 PF10925.8 NODE_49861_length_372_cov_2.225519_g41968_i0reverse_frame_2 - 0.2 11.7 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2680) HSR PF03172.13 NODE_49857_length_372_cov_2.314540_g41964_i0forward_frame_3 - 0.14 12.4 0.0 0.37 11.0 0.0 1.9 1 1 0 1 1 1 0 HSR domain MFS_1 PF07690.16 NODE_49857_length_372_cov_2.314540_g41964_i0forward_frame_2 - 3.2e-08 32.9 0.9 3.3e-08 32.8 0.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily BT1 PF03092.16 NODE_49857_length_372_cov_2.314540_g41964_i0forward_frame_2 - 0.0023 16.2 0.0 0.0026 16.1 0.0 1.0 1 0 0 1 1 1 1 BT1 family CstA PF02554.14 NODE_49857_length_372_cov_2.314540_g41964_i0forward_frame_2 - 0.068 12.1 0.0 0.082 11.8 0.0 1.1 1 0 0 1 1 1 0 Carbon starvation protein CstA zf-H2C2_2 PF13465.6 NODE_49855_length_372_cov_2.335312_g41962_i0reverse_frame_3 - 0.19 12.2 2.3 2.4 8.8 0.5 2.3 2 0 0 2 2 2 0 Zinc-finger double domain HdeA PF06411.11 NODE_49846_length_372_cov_3.219585_g41953_i0reverse_frame_2 - 7.7e-19 67.7 0.3 1.1e-18 67.2 0.3 1.2 1 0 0 1 1 1 1 HdeA/HdeB family IGF2_C PF08365.11 NODE_49844_length_372_cov_3.317507_g41951_i0reverse_frame_3 - 0.061 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide DUF2534 PF10749.9 NODE_49841_length_372_cov_4.551929_g41948_i0reverse_frame_3 - 6.6e-22 77.5 2.5 8.6e-22 77.1 2.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2534) Fig1 PF12351.8 NODE_49835_length_372_cov_40.551929_g41942_i0reverse_frame_2 - 0.032 14.2 0.2 0.038 13.9 0.2 1.1 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 DUF5316 PF17247.2 NODE_49835_length_372_cov_40.551929_g41942_i0reverse_frame_2 - 0.075 13.1 0.2 0.075 13.1 0.2 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5316) ExbD PF02472.16 NODE_49835_length_372_cov_40.551929_g41942_i0reverse_frame_2 - 1.1 9.4 6.8 0.9 9.7 5.6 1.5 1 1 0 1 1 1 0 Biopolymer transport protein ExbD/TolR Fijivirus_P9-2 PF06837.11 NODE_49830_length_372_cov_73.982196_g41937_i0reverse_frame_2 - 0.06 12.8 3.1 0.064 12.7 2.4 1.5 1 1 0 1 1 1 0 Fijivirus P9-2 protein PAP2_C PF14360.6 NODE_49830_length_372_cov_73.982196_g41937_i0forward_frame_2 - 0.25 11.9 4.6 0.3 11.6 1.8 2.0 2 0 0 2 2 2 0 PAP2 superfamily C-terminal UNC119_bdg PF15435.6 NODE_49826_length_372_cov_80.234421_g41933_i0reverse_frame_2 - 0.098 12.2 0.2 0.12 12.0 0.2 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue NICE-1 PF15845.5 NODE_49815_length_372_cov_153.504451_g41922_i0forward_frame_3 - 0.17 12.6 7.0 0.12 13.2 5.1 1.6 2 0 0 2 2 2 0 Cysteine-rich C-terminal 1 family Radial_spoke_3 PF06098.11 NODE_49812_length_372_cov_173.127596_g41919_i0reverse_frame_2 - 0.11 11.8 2.5 0.15 11.3 2.5 1.1 1 0 0 1 1 1 0 Radial spoke protein 3 EMC3_TMCO1 PF01956.16 NODE_49812_length_372_cov_173.127596_g41919_i0reverse_frame_2 - 0.16 11.7 0.2 8.6 6.1 0.0 2.1 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Ribosomal_L14 PF00238.19 NODE_49807_length_372_cov_318.575668_g41914_i0reverse_frame_3 - 1.3e-14 54.3 0.0 1.9e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e SH3_1 PF00018.28 NODE_49807_length_372_cov_318.575668_g41914_i0reverse_frame_3 - 0.13 11.9 0.2 0.32 10.6 0.1 1.7 2 0 0 2 2 2 0 SH3 domain YqfQ PF14181.6 ORF99428 - 0.9 9.7 8.8 1.2 9.3 8.8 1.1 1 0 0 1 1 1 0 YqfQ-like protein O-antigen_lig PF13425.6 ORF99428 - 6.4 5.5 6.4 7 5.3 6.4 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Med29 PF11568.8 ORF98910 - 0.054 13.7 2.9 1.7 8.8 0.6 2.1 1 1 1 2 2 2 0 Mediator complex subunit 29 KIP1 PF07765.12 ORF98910 - 0.1 12.8 2.3 0.18 11.9 1.6 1.8 1 1 1 2 2 2 0 KIP1-like protein TPR_2 PF07719.17 ORF98811 - 0.0002 21.2 0.3 0.12 12.5 0.1 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF98811 - 0.00065 19.7 3.2 0.056 13.7 0.3 2.8 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF98811 - 0.00083 19.1 2.7 0.027 14.3 0.1 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF98811 - 0.039 14.5 0.0 0.056 14.0 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF98811 - 0.097 13.5 0.0 2.1 9.4 0.0 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat RNR_N PF08343.10 ORF98811 - 0.2 11.7 2.4 0.16 12.0 1.1 1.5 2 0 0 2 2 2 0 Ribonucleotide reductase N-terminal ABC2_membrane_3 PF12698.7 ORF96717 - 0.27 10.3 11.9 0.34 10.0 11.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein SpoIIIAH PF12685.7 ORF96151 - 0.00021 21.2 0.4 0.00026 20.9 0.4 1.1 1 0 0 1 1 1 1 SpoIIIAH-like protein Zip PF02535.22 ORF96151 - 0.0042 16.4 4.2 0.0046 16.2 4.2 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter OATP PF03137.20 ORF96151 - 0.041 12.2 0.0 0.041 12.2 0.0 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family V_ATPase_I PF01496.19 ORF96151 - 0.042 11.8 0.8 0.046 11.6 0.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ABC2_membrane_3 PF12698.7 ORF96151 - 0.14 11.2 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Sec62 PF03839.16 ORF96151 - 0.17 11.4 2.3 0.21 11.1 2.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 CLN3 PF02487.17 ORF96151 - 0.19 10.7 0.1 0.19 10.7 0.1 1.1 1 0 0 1 1 1 0 CLN3 protein p450 PF00067.22 ORF95906 - 2.3e-11 43.1 0.0 2.5e-11 43.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 PAAR_motif PF05488.13 ORF95075 - 0.02 15.0 1.1 0.037 14.2 0.6 1.7 2 1 0 2 2 2 0 PAAR motif AKAP95 PF04988.12 ORF94496 - 0.14 12.4 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) zf-B_box PF00643.24 ORF94327 - 0.0037 17.4 7.3 0.0061 16.7 3.0 2.3 2 0 0 2 2 2 1 B-box zinc finger DUF740 PF05340.12 ORF94327 - 0.1 11.3 0.2 0.17 10.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF740) EF-hand_7 PF13499.6 ORF92400 - 0.00011 22.6 6.8 0.0056 17.1 0.6 2.3 1 1 1 2 2 2 2 EF-hand domain pair Pkinase PF00069.25 ORF92400 - 0.00084 18.8 2.2 0.0035 16.7 0.0 2.4 2 1 0 2 2 2 1 Protein kinase domain EF-hand_1 PF00036.32 ORF92400 - 0.0041 16.6 3.4 0.0064 16.0 1.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF92400 - 0.0043 16.9 0.7 0.023 14.6 0.3 2.4 3 0 0 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF92400 - 0.0048 16.7 1.4 0.0097 15.7 0.4 2.0 1 1 1 2 2 2 1 EF-hand domain pair pPIWI_RE_REase PF18154.1 ORF92400 - 0.03 14.3 0.1 0.63 10.0 0.0 2.1 1 1 1 2 2 2 0 REase associating with pPIWI_RE Vps4_C PF09336.10 ORF92400 - 0.049 13.6 2.6 0.12 12.4 0.6 2.3 2 1 0 2 2 2 0 Vps4 C terminal oligomerisation domain S-AdoMet_synt_N PF00438.20 ORF92400 - 0.079 13.6 0.1 0.16 12.6 0.0 1.6 2 0 0 2 2 2 0 S-adenosylmethionine synthetase, N-terminal domain TauD PF02668.16 ORF90244 - 3.7e-17 63.0 1.6 6.6e-10 39.2 0.0 2.0 2 0 0 2 2 2 2 Taurine catabolism dioxygenase TauD, TfdA family Ion_trans PF00520.31 ORF89715 - 1.4e-07 31.0 2.2 1.8e-07 30.7 2.2 1.1 1 0 0 1 1 1 1 Ion transport protein DUF92 PF01940.16 ORF89715 - 0.0079 15.6 2.9 0.018 14.4 2.9 1.6 1 1 0 1 1 1 1 Integral membrane protein DUF92 Pheromone PF08015.11 ORF89594 - 0.037 15.1 8.6 0.099 13.7 8.6 1.8 1 1 0 1 1 1 0 Fungal mating-type pheromone HHH_3 PF12836.7 ORF89099 - 0.086 13.1 0.8 0.17 12.2 0.2 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix motif Staph_opine_DH PF10100.9 ORF89099 - 0.24 10.0 0.7 0.28 9.8 0.7 1.1 1 0 0 1 1 1 0 Staphylopine dehydrogenase Ank_5 PF13857.6 ORF89064 - 0.00029 21.1 0.0 0.00067 19.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF89064 - 0.00037 21.0 0.1 0.00055 20.5 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF89064 - 0.0015 18.8 0.1 0.0076 16.7 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 ORF89064 - 0.059 14.0 0.0 0.12 13.0 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeats (many copies) YoqO PF14037.6 ORF88900 - 0.066 13.8 0.1 2.5 8.7 0.0 2.0 2 0 0 2 2 2 0 YoqO-like protein DUF3098 PF11297.8 ORF88900 - 0.13 11.9 0.2 1.4 8.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) AAA_28 PF13521.6 ORF87994 - 0.069 13.4 1.8 0.13 12.5 1.8 1.4 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 ORF87994 - 0.07 13.1 0.5 0.11 12.4 0.1 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain PRK PF00485.18 ORF87994 - 0.15 11.8 1.4 0.25 11.1 1.4 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family HTH_29 PF13551.6 ORF8790 - 2.5e-19 69.0 0.1 4.3e-19 68.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.6 ORF8790 - 3.1e-05 23.6 0.0 4.8e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 ORF8790 - 0.00019 21.5 0.0 0.00032 20.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_32 PF13565.6 ORF8790 - 0.00029 21.4 0.0 0.00058 20.4 0.0 1.5 1 1 1 2 2 2 1 Homeodomain-like domain HTH_7 PF02796.15 ORF8790 - 0.00072 19.6 0.0 0.0015 18.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase DUF3105 PF11303.8 ORF8790 - 0.011 15.9 0.0 0.016 15.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3105) HTH_Tnp_1 PF01527.20 ORF8790 - 0.013 15.8 0.0 0.019 15.2 0.0 1.3 1 0 0 1 1 1 0 Transposase LZ_Tnp_IS481 PF13011.6 ORF8790 - 0.019 15.5 0.0 0.027 15.0 0.0 1.2 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 HTH_17 PF12728.7 ORF8790 - 0.02 15.0 0.0 0.038 14.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_22 PF13309.6 ORF8790 - 0.023 14.8 0.0 0.14 12.3 0.0 2.1 2 0 0 2 2 2 0 HTH domain HTH_8 PF02954.19 ORF8790 - 0.059 13.2 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family Asp_Arg_Hydrox PF05118.15 ORF87553 - 1.2e-11 44.7 0.1 1.9e-11 44.1 0.1 1.3 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase GAS2 PF02187.17 ORF858 - 1.7e-06 28.0 0.0 2.6e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain CcdB PF01845.17 ORF84759 - 0.07 13.4 0.0 6.7 7.0 0.0 2.1 2 0 0 2 2 2 0 CcdB protein DUF515 PF04415.12 ORF84219 - 7 4.9 8.4 10 4.4 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) NUMOD1 PF07453.13 ORF84126 - 0.051 13.8 1.8 6 7.3 0.0 3.1 3 0 0 3 3 3 0 NUMOD1 domain PSP PF04046.16 ORF82960 - 1.1e-20 73.3 3.1 1.7e-20 72.6 3.1 1.3 1 0 0 1 1 1 1 PSP DUF382 PF04037.13 ORF82960 - 4.6e-18 65.6 0.2 7.2e-18 65.0 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF382) MADF_DNA_bdg PF10545.9 ORF82396 - 0.12 12.7 0.5 0.18 12.2 0.5 1.3 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like PEP-CTERM PF07589.11 ORF81961 - 0.19 11.8 1.9 0.51 10.5 1.9 1.9 1 0 0 1 1 1 0 PEP-CTERM motif CAP PF00188.26 ORF81880 - 0.01 16.7 0.0 0.01 16.7 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DMA PF03474.14 ORF81880 - 0.16 11.6 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 DMRTA motif DUF1198 PF06711.11 ORF81292 - 0.094 12.8 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1198) DUF5110 PF17137.4 ORF81087 - 0.00014 22.1 2.9 0.0003 21.0 2.1 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF5110) FmrO PF07091.11 ORF80937 - 0.026 14.1 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) NETI PF14044.6 ORF80937 - 0.13 12.0 0.0 1.7 8.4 0.0 2.2 2 0 0 2 2 2 0 NETI protein Ribosomal_S15 PF00312.22 ORF8086 - 0.0088 16.2 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 Gemini_V2 PF01524.17 ORF8086 - 0.04 14.1 0.0 0.057 13.6 0.0 1.2 1 0 0 1 1 1 0 Geminivirus V2 protein SpoIIIAH PF12685.7 ORF79786 - 0.00012 22.0 0.7 0.00015 21.6 0.7 1.1 1 0 0 1 1 1 1 SpoIIIAH-like protein Zip PF02535.22 ORF79786 - 0.011 15.0 4.6 0.012 14.9 4.6 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter V_ATPase_I PF01496.19 ORF79786 - 0.027 12.4 1.0 0.031 12.2 1.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family OATP PF03137.20 ORF79786 - 0.042 12.1 0.1 0.043 12.1 0.1 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family ABC2_membrane_3 PF12698.7 ORF79786 - 0.088 11.9 0.0 0.092 11.8 0.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein CLN3 PF02487.17 ORF79786 - 0.19 10.8 0.1 0.19 10.7 0.1 1.1 1 0 0 1 1 1 0 CLN3 protein Sec62 PF03839.16 ORF79786 - 0.26 10.8 4.0 0.32 10.5 4.0 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 SAPS PF04499.15 ORF79786 - 0.47 9.2 8.3 0.51 9.1 8.3 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF1189 PF06691.11 ORF79786 - 3.9 7.0 4.4 8.3 5.9 4.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1189) NLPC_P60 PF00877.19 ORF79633 - 1.7e-33 114.7 0.0 2e-33 114.6 0.0 1.0 1 0 0 1 1 1 1 NlpC/P60 family DUF1175 PF06672.11 ORF79633 - 0.00031 20.5 0.0 0.31 10.7 0.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1175) Peptidase_C92 PF05708.12 ORF79633 - 0.00068 19.8 0.0 0.53 10.4 0.0 2.4 2 1 0 2 2 2 2 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Amidase_6 PF12671.7 ORF79633 - 0.0012 18.9 0.0 0.0014 18.7 0.0 1.1 1 0 0 1 1 1 1 Putative amidase domain Amidase_5 PF05382.13 ORF79633 - 0.0082 16.1 0.2 0.025 14.5 0.2 1.7 1 1 0 1 1 1 1 Bacteriophage peptidoglycan hydrolase CHAP PF05257.16 ORF79633 - 0.012 16.2 0.0 0.019 15.5 0.0 1.4 1 1 0 1 1 1 0 CHAP domain LRAT PF04970.13 ORF79633 - 0.12 12.7 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Lecithin retinol acyltransferase Asp PF00026.23 ORF79039 - 0.003 17.0 0.1 0.004 16.6 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF79039 - 0.059 13.6 0.0 0.085 13.1 0.0 1.2 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal CcdB PF01845.17 ORF77989 - 0.07 13.4 0.0 6.7 7.0 0.0 2.1 2 0 0 2 2 2 0 CcdB protein DNase-RNase PF02577.14 ORF77987 - 0.11 12.2 0.1 0.15 11.7 0.1 1.4 1 1 0 1 1 1 0 Bifunctional nuclease Inhibitor_I10 PF12559.8 ORF77721 - 0.98 9.7 3.1 12 6.3 0.0 2.4 2 1 0 2 2 2 0 Serine endopeptidase inhibitors CBFD_NFYB_HMF PF00808.23 ORF77363 - 0.00015 22.0 0.0 0.00028 21.1 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-T_C PF15511.6 ORF77363 - 0.00019 21.5 0.0 0.00031 20.8 0.0 1.3 1 1 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold AbiEi_4 PF13338.6 ORF77363 - 0.079 13.1 0.2 0.14 12.3 0.2 1.4 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin Histone PF00125.24 ORF77363 - 0.25 11.7 2.5 0.67 10.3 2.5 1.7 1 1 0 1 1 1 0 Core histone H2A/H2B/H3/H4 ABC_tran PF00005.27 ORF76391 - 7.7e-10 39.4 0.1 2.6e-09 37.7 0.0 1.7 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF76391 - 0.0085 15.6 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF4388 PF14332.6 ORF76391 - 0.012 15.9 0.0 0.017 15.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4388) SbcCD_C PF13558.6 ORF76391 - 0.032 14.4 0.2 0.18 12.1 0.2 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit HTH_Crp_2 PF13545.6 ORF74421 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain FSH1 PF03959.13 ORF73648 - 0.006 16.3 0.1 0.024 14.3 0.0 1.7 1 1 1 2 2 2 1 Serine hydrolase (FSH1) Peptidase_M16_M PF16187.5 ORF73492 - 0.089 12.1 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 Middle or third domain of peptidase_M16 CAP_C PF08603.11 ORF68915 - 0.024 14.3 1.3 0.033 13.8 0.1 1.7 1 1 0 2 2 2 0 Adenylate cyclase associated (CAP) C terminal Asp PF00026.23 ORF68697 - 0.028 13.8 0.1 0.041 13.3 0.1 1.3 1 0 0 1 1 1 0 Eukaryotic aspartyl protease Seipin PF06775.14 ORF68597 - 0.16 12.1 0.6 0.2 11.7 0.6 1.1 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) Pkinase PF00069.25 ORF68286 - 1.3e-35 123.1 0.1 1.4e-35 123.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF68286 - 7.8e-21 74.5 0.0 8.5e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF68286 - 2e-05 24.1 0.0 2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF68286 - 0.00024 20.3 0.0 0.00031 19.9 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pkinase_fungal PF17667.1 ORF68286 - 0.00034 19.5 0.0 0.0005 19.0 0.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF68286 - 0.0015 17.6 0.2 0.0017 17.4 0.2 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF68286 - 0.12 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family EcoRII-N PF09217.10 ORF67780 - 0.11 12.3 0.1 0.22 11.3 0.1 1.5 1 1 1 2 2 2 0 Restriction endonuclease EcoRII, N-terminal FRG1 PF06229.12 ORF67758 - 0.0065 16.2 6.0 0.008 15.9 6.0 1.1 1 0 0 1 1 1 1 FRG1-like domain Tetraspanin PF00335.20 ORF67217 - 0.012 15.3 0.0 0.014 15.1 0.0 1.0 1 0 0 1 1 1 0 Tetraspanin family Fig1 PF12351.8 ORF67217 - 0.067 13.1 0.1 0.093 12.6 0.1 1.2 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 DUF1707 PF08044.11 ORF67181 - 0.021 14.9 0.1 0.036 14.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1707) DUF1090 PF06476.12 ORF67181 - 0.89 9.7 7.5 0.73 10.0 5.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1090) DUF2138 PF09909.9 ORF65885 - 3.1e-53 181.0 1.9 3.4e-53 180.8 1.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2138) G3P_antiterm PF04309.12 ORF65885 - 0.18 11.2 0.0 0.24 10.8 0.0 1.2 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator HHH_2 PF12826.7 ORF64880 - 0.09 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif Spore_III_AB PF09548.10 ORF64880 - 0.4 10.8 2.8 0.54 10.4 2.8 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) Methyltransf_11 PF08241.12 ORF64763 - 2.3e-06 28.2 0.0 3.1e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF64763 - 1.6e-05 25.5 0.0 2.5e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF64763 - 3e-05 23.8 0.0 3.3e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF64763 - 4.3e-05 23.4 0.0 0.00012 22.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF64763 - 0.0025 18.5 0.0 0.0035 18.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Asp PF00026.23 ORF64081 - 0.0026 17.2 0.1 0.0036 16.8 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF64081 - 0.071 13.4 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal NurA PF09376.10 ORF64046 - 0.029 14.1 1.4 0.033 13.9 1.4 1.1 1 0 0 1 1 1 0 NurA domain RTC PF01137.21 ORF64028 - 1.8e-10 40.4 0.0 2.1e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase Img2 PF05046.14 ORF64028 - 0.051 13.9 0.1 0.2 12.0 0.0 1.8 1 1 1 2 2 2 0 Mitochondrial large subunit ribosomal protein (Img2) RanGAP1_C PF07834.11 ORF64028 - 0.071 12.7 0.2 0.088 12.4 0.2 1.2 1 0 0 1 1 1 0 RanGAP1 C-terminal domain YebG PF07130.12 ORF64028 - 0.074 12.9 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 YebG protein CAP PF00188.26 ORF63850 - 0.069 14.0 0.0 0.072 13.9 0.0 1.1 1 0 0 1 1 1 0 Cysteine-rich secretory protein family Seipin PF06775.14 ORF63583 - 0.16 12.1 0.6 0.2 11.7 0.6 1.1 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) Seipin PF06775.14 ORF63565 - 0.16 12.1 0.6 0.2 11.7 0.6 1.1 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) PfkB PF00294.24 ORF63027 - 3.2e-30 105.5 0.5 3.5e-30 105.4 0.5 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase FAM176 PF14851.6 ORF62340 - 0.16 11.7 3.5 0.19 11.4 3.5 1.2 1 0 0 1 1 1 0 FAM176 family DHHA2 PF02833.14 ORF61899 - 6.3e-13 49.1 0.0 6.9e-13 49.0 0.0 1.0 1 0 0 1 1 1 1 DHHA2 domain DUF4709 PF15821.5 ORF61899 - 0.1 12.9 0.4 3.3 8.0 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4709) HTH_17 PF12728.7 ORF60745 - 6.9e-09 35.8 0.1 4.3e-08 33.2 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF60745 - 0.013 15.3 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.6 ORF60745 - 0.025 14.6 0.3 0.065 13.3 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn helix Rotamase_2 PF13145.6 ORF60504 - 1.7 9.5 10.4 3.2 8.6 10.4 1.6 1 1 0 1 1 1 0 PPIC-type PPIASE domain CDP-OH_P_transf PF01066.21 ORF60174 - 2.5e-16 60.2 0.1 3.4e-16 59.8 0.1 1.2 1 0 0 1 1 1 1 CDP-alcohol phosphatidyltransferase DUF1422 PF07226.11 ORF60174 - 0.029 14.4 0.1 0.039 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) DUF1836 PF08876.11 ORF57870 - 0.034 14.2 5.3 0.052 13.6 5.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1836) Pkinase PF00069.25 ORF57837 - 1.3e-35 123.1 0.1 1.4e-35 123.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57837 - 7.8e-21 74.5 0.0 8.5e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF57837 - 2e-05 24.1 0.0 2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF57837 - 0.00024 20.3 0.0 0.00031 19.9 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pkinase_fungal PF17667.1 ORF57837 - 0.00034 19.5 0.0 0.0005 19.0 0.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF57837 - 0.0015 17.6 0.2 0.0017 17.4 0.2 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF57837 - 0.12 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YvrJ PF12841.7 ORF56385 - 6.7 6.3 5.2 2.8 7.6 0.5 2.2 2 0 0 2 2 2 0 YvrJ protein family PTSIIA_gutA PF03829.13 ORF54592 - 4.9e-39 132.7 0.0 5.5e-39 132.5 0.0 1.0 1 0 0 1 1 1 1 PTS system glucitol/sorbitol-specific IIA component Vac14_Fig4_bd PF11916.8 ORF53518 - 0.072 12.7 5.5 0.08 12.6 5.5 1.0 1 0 0 1 1 1 0 Vacuolar protein 14 C-terminal Fig4p binding Laminin_N PF00055.17 ORF53518 - 0.087 12.4 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Laminin N-terminal (Domain VI) DUF3975 PF13126.6 ORF53518 - 0.14 12.7 1.2 0.21 12.1 0.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3975) YitT_membrane PF02588.15 ORF52935 - 0.099 12.0 10.9 0.27 10.6 1.9 2.2 1 1 1 2 2 2 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ERGIC_N PF13850.6 ORF52870 - 0.0099 16.2 0.2 0.014 15.7 0.2 1.3 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TatD_DNase PF01026.21 ORF52849 - 0.087 12.2 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 TatD related DNase TrkA_N PF02254.18 ORF52849 - 0.18 12.1 0.0 0.43 10.9 0.0 1.6 2 0 0 2 2 2 0 TrkA-N domain NES_C_h PF18208.1 ORF52430 - 0.0013 19.0 2.8 0.0013 19.0 2.8 1.7 1 1 0 2 2 2 1 Nicking enzyme C-terminal middle helical domain SpoIIIAH PF12685.7 ORF51911 - 0.00021 21.2 0.4 0.00026 20.9 0.4 1.1 1 0 0 1 1 1 1 SpoIIIAH-like protein Zip PF02535.22 ORF51911 - 0.0042 16.4 4.2 0.0046 16.2 4.2 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter OATP PF03137.20 ORF51911 - 0.041 12.2 0.0 0.041 12.2 0.0 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family V_ATPase_I PF01496.19 ORF51911 - 0.042 11.8 0.8 0.046 11.6 0.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ABC2_membrane_3 PF12698.7 ORF51911 - 0.14 11.2 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Sec62 PF03839.16 ORF51911 - 0.17 11.4 2.3 0.21 11.1 2.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 CLN3 PF02487.17 ORF51911 - 0.19 10.7 0.1 0.19 10.7 0.1 1.1 1 0 0 1 1 1 0 CLN3 protein CcmH PF03918.14 ORF51025 - 0.0079 15.5 0.1 0.01 15.2 0.1 1.3 1 1 0 1 1 1 1 Cytochrome C biogenesis protein Ecotin PF03974.13 ORF5088 - 3.2e-47 159.5 0.1 3.6e-47 159.3 0.1 1.0 1 0 0 1 1 1 1 Ecotin SP2 PF03014.14 ORF5088 - 0.099 11.0 0.0 0.13 10.7 0.0 1.1 1 0 0 1 1 1 0 Structural protein 2 Ribosomal_L23 PF00276.20 ORF50345 - 1.1e-13 51.4 1.9 8.3e-13 48.5 1.9 2.1 1 1 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L23eN PF03939.13 ORF50345 - 9.1e-08 32.2 2.0 9.1e-08 32.2 2.0 1.9 2 0 0 2 2 2 1 Ribosomal protein L23, N-terminal domain zf-C3HC4_3 PF13920.6 ORF48421 - 5.8e-08 32.5 7.4 5.1e-06 26.2 2.4 2.1 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF48421 - 0.00023 20.9 7.6 0.025 14.4 4.6 2.2 2 0 0 2 2 2 2 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF48421 - 0.0016 18.3 5.7 0.038 13.9 5.8 2.2 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF48421 - 0.0027 18.0 6.3 0.071 13.5 1.8 2.2 2 0 0 2 2 2 2 Ring finger domain zf-RING_5 PF14634.6 ORF48421 - 0.0075 16.2 7.9 0.028 14.4 7.9 1.9 1 1 0 1 1 1 1 zinc-RING finger domain Cys_rich_KTR PF14205.6 ORF48421 - 0.039 13.8 3.7 2.1 8.2 0.9 2.3 2 1 0 2 2 2 0 Cysteine-rich KTR zf-LITAF-like PF10601.9 ORF48421 - 0.043 14.1 6.0 2.5 8.4 0.1 2.9 2 1 1 3 3 3 0 LITAF-like zinc ribbon domain DUF1178 PF06676.11 ORF48421 - 0.045 14.1 2.5 5.7 7.3 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1178) Zn_Tnp_IS91 PF14319.6 ORF48421 - 0.049 13.7 3.0 0.061 13.4 0.6 2.0 1 1 1 2 2 2 0 Transposase zinc-binding domain YacG PF03884.14 ORF48421 - 0.063 13.0 1.1 1.7 8.4 0.2 2.3 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG zf-C3HC4_2 PF13923.6 ORF48421 - 0.077 12.9 8.0 0.77 9.7 2.8 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-Di19 PF05605.12 ORF48421 - 0.63 10.4 7.1 2 8.8 0.1 3.0 2 1 1 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding zf-RING_4 PF14570.6 ORF48421 - 2.5 8.0 10.6 3 7.7 0.2 2.7 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain HscB_4_cys PF18256.1 ORF48421 - 3.7 7.4 7.6 0.84 9.5 1.5 2.4 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif MFS_1 PF07690.16 ORF48232 - 0.00051 19.1 9.3 0.022 13.7 4.6 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Pam17 PF08566.10 ORF48232 - 0.13 12.1 0.6 0.49 10.2 0.2 1.9 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 DUF4495 PF14906.6 ORF48232 - 0.16 11.0 0.0 0.18 10.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4495) MHC_I_C PF06623.11 ORF47771 - 0.0042 17.0 0.5 0.0068 16.3 0.5 1.3 1 0 0 1 1 1 1 MHC_I C-terminus Pkinase PF00069.25 ORF44563 - 1.7e-17 63.7 0.0 2.1e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44563 - 1.9e-06 27.4 0.0 2.5e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF44563 - 3.8e-06 26.4 0.0 4.7e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like DUF4953 PF16313.5 ORF44067 - 0.0014 17.9 1.9 0.0017 17.7 1.9 1.0 1 0 0 1 1 1 1 Met-zincin ACCA PF03255.14 ORF44067 - 0.019 14.9 1.6 0.024 14.5 1.6 1.2 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF4988 PF16378.5 ORF44067 - 0.046 13.4 0.9 0.057 13.1 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function MamL-1 PF09596.10 ORF44067 - 0.058 13.6 0.0 0.31 11.3 0.0 2.0 2 0 0 2 2 2 0 MamL-1 domain APG6_N PF17675.1 ORF44067 - 0.063 13.8 11.4 0.092 13.3 11.4 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region TMPIT PF07851.13 ORF44067 - 0.065 12.5 8.6 0.079 12.2 8.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein Atg14 PF10186.9 ORF44067 - 0.073 12.1 5.9 0.078 12.1 5.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 ORF44067 - 0.13 12.4 10.4 0.41 10.8 6.8 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DASH_Dad2 PF08654.10 ORF44067 - 0.15 12.5 4.4 0.11 13.0 2.4 1.7 2 0 0 2 2 2 0 DASH complex subunit Dad2 Uteroglobin PF01099.17 ORF44067 - 0.17 12.3 3.2 0.62 10.4 0.1 2.3 1 1 0 2 2 2 0 Uteroglobin family FapA PF03961.13 ORF44067 - 3.7 6.0 11.1 6.5 5.2 11.0 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A TMIE PF16038.5 ORF44067 - 9.4 6.2 7.0 5.8 6.8 2.8 2.1 1 1 1 2 2 2 0 TMIE protein RtcB PF01139.17 ORF43686 - 2.8e-18 66.3 0.0 3e-18 66.2 0.0 1.2 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB TMEM223 PF14640.6 ORF43524 - 0.024 14.8 0.0 0.028 14.6 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 223 DUF3696 PF12476.8 ORF43460 - 0.0018 18.6 0.8 0.013 15.8 0.3 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3696) Asp PF00026.23 ORF43167 - 0.0026 17.2 0.1 0.0036 16.8 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF43167 - 0.071 13.4 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal Clat_adaptor_s PF01217.20 ORF43106 - 8.8e-52 174.8 4.3 9.8e-52 174.7 4.3 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain SWIRM PF04433.17 ORF43106 - 0.078 13.3 0.8 0.12 12.7 0.8 1.4 1 0 0 1 1 1 0 SWIRM domain DHHA2 PF02833.14 ORF43074 - 6.3e-13 49.1 0.0 6.9e-13 49.0 0.0 1.0 1 0 0 1 1 1 1 DHHA2 domain DUF4709 PF15821.5 ORF43074 - 0.1 12.9 0.4 3.3 8.0 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4709) Seipin PF06775.14 ORF4278 - 0.16 12.1 0.6 0.2 11.7 0.6 1.1 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) Ligase_CoA PF00549.19 ORF42322 - 8.9e-13 48.3 0.1 9.9e-13 48.2 0.1 1.1 1 0 0 1 1 1 1 CoA-ligase DUF3644 PF12358.8 ORF4229 - 0.062 13.8 1.1 0.38 11.3 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3644) CDP-OH_P_transf PF01066.21 ORF40960 - 2.5e-16 60.2 0.1 3.4e-16 59.8 0.1 1.2 1 0 0 1 1 1 1 CDP-alcohol phosphatidyltransferase DUF1422 PF07226.11 ORF40960 - 0.029 14.4 0.1 0.039 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) UBA_e1_thiolCys PF10585.9 ORF40700 - 1.8e-19 70.7 8.9 1.9e-19 70.6 8.9 1.0 1 0 0 1 1 1 1 Ubiquitin-activating enzyme active site DUF3871 PF12987.7 ORF40700 - 0.045 12.6 0.2 0.049 12.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3871) Golgin_A5 PF09787.9 ORF40554 - 0.12 11.8 12.4 0.15 11.5 12.4 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 ORF40554 - 0.18 11.2 8.0 0.21 10.9 8.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4525 PF15027.6 ORF40554 - 0.24 11.1 1.7 0.54 10.0 1.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4525) FAM76 PF16046.5 ORF40554 - 0.26 10.6 9.9 0.27 10.5 9.9 1.1 1 0 0 1 1 1 0 FAM76 protein TMF_DNA_bd PF12329.8 ORF40554 - 0.27 11.3 10.6 0.42 10.7 0.7 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding BRE1 PF08647.11 ORF40554 - 0.3 11.2 14.4 0.09 12.9 2.0 2.9 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase MRPL52 PF18699.1 ORF40554 - 0.98 9.6 10.1 2.4 8.4 2.0 2.2 1 1 1 2 2 2 0 Mitoribosomal protein mL52 BST2 PF16716.5 ORF40554 - 2.9 8.5 9.4 1.2e+02 3.4 9.4 2.2 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 DivIC PF04977.15 ORF40554 - 3.4 7.5 15.9 2.5 7.9 4.5 2.6 1 1 1 2 2 2 0 Septum formation initiator UPF0242 PF06785.11 ORF40554 - 6.1 6.9 12.5 8.1 6.5 12.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF724 PF05266.14 ORF40554 - 7.5 6.3 11.5 3.7 7.3 5.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) tRNA-synt_2d PF01409.20 ORF40335 - 3.5e-57 193.7 0.5 3.9e-57 193.6 0.5 1.0 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 ORF40335 - 0.00057 19.4 0.0 0.00077 19.0 0.0 1.1 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain DUF3562 PF12085.8 ORF395 - 0.031 13.9 0.0 0.05 13.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) SLIDE PF09111.10 ORF38929 - 0.0095 16.0 2.7 0.014 15.4 2.7 1.2 1 0 0 1 1 1 1 SLIDE DCD PF06559.11 ORF38929 - 0.062 12.1 0.5 0.078 11.8 0.5 1.2 1 0 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) PSP PF04046.16 ORF37234 - 1.1e-20 73.3 3.1 1.7e-20 72.6 3.1 1.3 1 0 0 1 1 1 1 PSP DUF382 PF04037.13 ORF37234 - 4.6e-18 65.6 0.2 7.2e-18 65.0 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF382) MFMR_assoc PF16596.5 ORF34729 - 0.26 11.7 10.1 0.36 11.3 10.1 1.4 1 0 0 1 1 1 0 Disordered region downstream of MFMR Astro_capsid_p PF12226.8 ORF34729 - 0.57 9.3 12.3 0.68 9.0 12.3 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein PDDEXK_6 PF04720.12 ORF34729 - 2.5 8.0 8.7 3 7.7 8.7 1.2 1 0 0 1 1 1 0 PDDEXK-like family of unknown function DNA_pol_phi PF04931.13 ORF34729 - 3.7 5.5 18.1 4.1 5.4 18.1 1.0 1 0 0 1 1 1 0 DNA polymerase phi CDC45 PF02724.14 ORF34729 - 9.1 4.4 13.8 9.5 4.4 13.8 1.0 1 0 0 1 1 1 0 CDC45-like protein ASD2 PF08687.11 ORF34575 - 2.2 7.8 16.0 2.8 7.4 16.0 1.1 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 FAM220 PF15487.6 ORF34575 - 3.7 7.1 12.7 4.4 6.8 12.7 1.1 1 0 0 1 1 1 0 FAM220 family DTHCT PF08070.11 ORF34575 - 4.9 7.9 28.4 12 6.7 28.4 1.7 1 1 0 1 1 1 0 DTHCT (NUC029) region DUF3827 PF12877.7 ORF34575 - 8.9 4.6 15.8 10 4.3 15.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Sugar_tr PF00083.24 ORF34428 - 0.00017 20.6 1.4 0.00021 20.3 1.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter SieB PF14163.6 ORF34428 - 0.014 14.9 0.2 0.016 14.7 0.2 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B Glyco_tranf_2_5 PF13712.6 ORF34052 - 0.029 14.1 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family Pkinase PF00069.25 ORF33882 - 2.4e-34 118.9 0.1 2.7e-34 118.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33882 - 1.4e-18 67.1 0.0 1.6e-18 67.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF33882 - 1.6e-05 24.4 0.0 1.8e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF33882 - 0.00071 18.7 0.1 0.00084 18.5 0.1 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pkinase_fungal PF17667.1 ORF33882 - 0.0021 16.9 0.0 0.0024 16.7 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF33882 - 0.051 12.5 0.0 0.058 12.3 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 ORF33882 - 0.11 12.4 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF3176 PF11374.8 ORF33101 - 0.067 13.4 0.1 0.091 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3176) HTH_11 PF08279.12 ORF32973 - 0.042 13.8 0.0 0.69 9.9 0.0 2.1 2 0 0 2 2 2 0 HTH domain DUF4387 PF14330.6 ORF31660 - 0.045 14.4 0.1 0.061 14.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4387) Seipin PF06775.14 ORF31487 - 0.16 12.1 0.6 0.2 11.7 0.6 1.1 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) MHC_I_C PF06623.11 ORF31221 - 0.0042 17.0 0.5 0.0068 16.3 0.5 1.3 1 0 0 1 1 1 1 MHC_I C-terminus TPR_10 PF13374.6 ORF31047 - 1.3e-08 34.4 0.6 0.00018 21.3 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF31047 - 1.9e-08 33.7 2.3 0.013 15.3 0.1 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF31047 - 6.2e-06 26.4 2.7 0.028 14.7 0.1 2.7 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF31047 - 6.1e-05 22.8 0.2 0.00052 19.8 0.0 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF31047 - 0.00012 22.0 1.1 0.16 12.2 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF31047 - 0.0011 18.9 2.5 0.13 12.5 0.1 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat Na_Ca_ex PF01699.24 ORF30764 - 2.9e-17 63.0 12.2 3.1e-17 62.9 12.2 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein NicO PF03824.16 ORF30764 - 0.039 13.3 4.8 0.056 12.8 4.8 1.2 1 0 0 1 1 1 0 High-affinity nickel-transport protein DUF1857 PF08982.11 ORF30235 - 0.16 11.8 0.0 1.2 8.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1857) PA14 PF07691.12 ORF29082 - 2.3e-06 27.5 0.4 2.3e-06 27.5 0.4 1.7 2 1 0 2 2 2 1 PA14 domain REC104 PF17378.2 ORF29082 - 0.033 14.0 0.5 0.043 13.6 0.5 1.3 1 0 0 1 1 1 0 Meiotic recombination protein REC104 FliMN_C PF01052.20 ORF29082 - 0.18 11.8 0.0 0.33 11.0 0.0 1.4 1 0 0 1 1 1 0 Type III flagellar switch regulator (C-ring) FliN C-term AMA-1 PF02430.15 ORF28984 - 0.0056 15.7 3.4 0.0061 15.6 3.4 1.0 1 0 0 1 1 1 1 Apical membrane antigen 1 DAD PF02109.16 ORF28267 - 8.2e-23 80.8 0.2 9.2e-23 80.6 0.2 1.0 1 0 0 1 1 1 1 DAD family Aa_trans PF01490.18 ORF28267 - 0.0052 15.5 0.9 0.0061 15.3 0.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF5345 PF17280.2 ORF28267 - 0.17 11.8 1.1 0.39 10.7 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5345) DUF3043 PF11241.8 ORF27778 - 0.041 13.9 0.4 0.054 13.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) NDUF_B6 PF09782.9 ORF27778 - 0.11 12.6 0.3 0.11 12.6 0.3 1.8 1 1 1 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit TypeIII_RM_meth PF12564.8 ORF27765 - 0.041 14.0 0.0 0.054 13.6 0.0 1.1 1 0 0 1 1 1 0 Type III restriction/modification enzyme methylation subunit LRR_4 PF12799.7 ORF27581 - 8e-10 38.8 1.1 7.5e-05 23.0 0.1 2.9 1 1 2 3 3 3 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF27581 - 6.7e-08 32.0 2.2 3.1 8.7 0.1 4.3 4 0 0 4 4 4 3 Leucine Rich Repeat LRR_6 PF13516.6 ORF27581 - 3.7e-07 29.7 2.5 0.22 11.7 0.0 4.2 4 0 0 4 4 4 3 Leucine Rich repeat LRR_8 PF13855.6 ORF27581 - 3.5e-05 23.5 2.3 0.17 11.6 0.2 3.5 2 2 0 2 2 2 2 Leucine rich repeat LRR_2 PF07723.13 ORF27581 - 0.092 13.4 1.8 2.2 9.1 0.1 2.8 2 1 0 2 2 2 0 Leucine Rich Repeat DUF2784 PF10861.8 ORF27581 - 0.098 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF2784) Aldo_ket_red PF00248.21 ORF2589 - 5.2e-18 65.2 0.1 5.9e-18 65.1 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Pkinase PF00069.25 ORF25213 - 1.3e-35 123.1 0.1 1.4e-35 123.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF25213 - 7.8e-21 74.5 0.0 8.5e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF25213 - 2e-05 24.1 0.0 2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF25213 - 0.00024 20.3 0.0 0.00031 19.9 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pkinase_fungal PF17667.1 ORF25213 - 0.00034 19.5 0.0 0.0005 19.0 0.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF25213 - 0.0015 17.6 0.2 0.0017 17.4 0.2 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF25213 - 0.12 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family NurA PF09376.10 ORF2450 - 0.029 14.1 1.4 0.033 13.9 1.4 1.1 1 0 0 1 1 1 0 NurA domain DUF776 PF05604.11 ORF24273 - 0.26 11.6 1.8 0.29 11.5 1.8 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF776) Hexapep PF00132.24 ORF23651 - 1.1e-06 28.1 3.6 0.00063 19.4 3.8 2.6 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF23651 - 0.00089 19.0 6.4 0.0014 18.3 5.0 1.9 1 1 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF23651 - 0.0027 16.7 0.2 0.0035 16.3 0.2 1.1 1 0 0 1 1 1 1 L-fucokinase Glug PF07581.12 ORF23618 - 0.035 14.5 0.8 0.12 12.9 0.8 1.9 1 0 0 1 1 1 0 The GLUG motif PEP-CTERM PF07589.11 ORF23145 - 0.19 11.8 1.9 0.51 10.5 1.9 1.9 1 0 0 1 1 1 0 PEP-CTERM motif Metallophos PF00149.28 ORF2251 - 0.0011 19.5 0.8 0.0015 19.0 0.8 1.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase CHIP_TPR_N PF18391.1 ORF21120 - 0.13 13.0 0.0 0.2 12.4 0.0 1.3 1 0 0 1 1 1 0 CHIP N-terminal tetratricopeptide repeat domain GET2 PF08690.10 ORF20910 - 0.04 13.6 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 zf-LITAF-like PF10601.9 ORF20910 - 0.063 13.5 0.3 0.12 12.6 0.3 1.5 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain DUF484 PF04340.12 ORF20743 - 0.0032 17.2 0.0 0.0038 16.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF484 DUF2326 PF10088.9 ORF20743 - 0.059 13.1 0.2 0.094 12.4 0.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2326) DUF1924 PF09086.11 ORF19780 - 0.13 12.7 0.2 0.24 11.8 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1924) Ras PF00071.22 ORF19770 - 3.5e-10 39.7 0.1 4.9e-10 39.2 0.1 1.2 1 0 0 1 1 1 1 Ras family TraG-D_C PF12696.7 ORF19770 - 0.14 12.2 1.6 0.42 10.6 1.6 1.7 1 1 0 1 1 1 0 TraM recognition site of TraD and TraG Asp PF00026.23 ORF19228 - 0.0026 17.2 0.1 0.0036 16.8 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF19228 - 0.071 13.4 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal HRXXH PF13933.6 ORF19174 - 0.028 14.0 1.0 0.032 13.8 1.0 1.1 1 0 0 1 1 1 0 Putative peptidase family DUF4661 PF15576.6 ORF19174 - 1.3 8.9 4.8 1.4 8.7 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) Sulfatase PF00884.23 ORF17676 - 8.6e-06 25.4 0.2 1.4e-05 24.6 0.1 1.5 1 1 1 2 2 2 1 Sulfatase PilS PF08805.11 ORF1623 - 0.048 13.5 0.6 0.065 13.1 0.6 1.3 1 1 0 1 1 1 0 PilS N terminal GARP PF16731.5 ORF15976 - 0.0027 17.4 7.1 0.0033 17.1 7.1 1.2 1 0 0 1 1 1 1 Glutamic acid/alanine-rich protein of Trypanosoma Tli4_N PF18443.1 ORF15976 - 0.0049 17.2 0.7 0.0058 17.0 0.7 1.1 1 0 0 1 1 1 1 Tle cognate immunity protein 4 N-terminal domain DUF1515 PF07439.11 ORF15976 - 0.013 15.5 2.2 0.016 15.2 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) Laminin_II PF06009.12 ORF15976 - 0.024 14.7 2.1 2 8.4 0.5 2.2 1 1 1 2 2 2 0 Laminin Domain II Efg1 PF10153.9 ORF15976 - 0.075 13.4 5.1 0.1 13.0 5.1 1.2 1 0 0 1 1 1 0 rRNA-processing protein Efg1 MTBP_N PF14918.6 ORF15976 - 0.089 12.3 1.9 0.1 12.0 1.9 1.0 1 0 0 1 1 1 0 MDM2-binding PCRF PF03462.18 ORF15976 - 0.18 11.6 4.6 0.23 11.3 4.6 1.1 1 0 0 1 1 1 0 PCRF domain 5_nucleotid PF05761.14 ORF15976 - 0.21 10.4 1.6 0.26 10.2 1.6 1.0 1 0 0 1 1 1 0 5' nucleotidase family ERp29 PF07749.12 ORF15976 - 0.36 11.7 5.6 0.39 11.6 4.8 1.5 1 1 0 1 1 1 0 Endoplasmic reticulum protein ERp29, C-terminal domain UPF0449 PF15136.6 ORF15976 - 1.1 9.7 6.9 0.7 10.4 2.1 2.2 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 MCD_N PF17408.2 ORF15976 - 9.2 6.5 7.1 12 6.1 0.4 2.9 1 1 2 3 3 3 0 Malonyl-CoA decarboxylase N-terminal domain Asp PF00026.23 ORF15735 - 0.019 14.4 0.4 0.027 13.9 0.1 1.4 2 0 0 2 2 2 0 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF15735 - 0.061 13.6 0.1 0.11 12.7 0.1 1.4 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal DUF1616 PF07760.11 ORF15735 - 0.14 11.5 0.0 0.15 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) Peptidase_S55 PF05580.12 ORF14573 - 0.059 13.3 0.0 0.077 12.9 0.0 1.1 1 0 0 1 1 1 0 SpoIVB peptidase S55 CAP PF00188.26 ORF14343 - 0.0056 17.5 0.0 0.0061 17.4 0.0 1.1 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DMA PF03474.14 ORF14343 - 0.15 11.6 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 DMRTA motif EMP24_GP25L PF01105.24 ORF13512 - 0.047 13.6 1.0 0.073 13.0 1.0 1.3 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Spt4 PF06093.13 ORF13512 - 0.092 12.9 1.2 0.092 12.9 1.2 1.6 2 0 0 2 2 2 0 Spt4/RpoE2 zinc finger Stc1 PF12898.7 ORF13512 - 0.72 10.4 7.6 2.1 8.9 7.6 2.0 1 1 0 1 1 1 0 Stc1 domain zf-C4pol PF14260.6 ORF13512 - 1.7 9.2 6.4 0.66 10.5 2.1 2.2 2 1 1 3 3 3 0 C4-type zinc-finger of DNA polymerase delta Metallophos_2 PF12850.7 ORF1315 - 0.012 15.8 1.3 0.013 15.7 1.3 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain NUDIX_2 PF13869.6 ORF13023 - 0.00043 19.9 0.0 0.00048 19.8 0.0 1.0 1 0 0 1 1 1 1 Nucleotide hydrolase Pex14_N PF04695.13 ORF13023 - 0.028 15.1 0.8 0.041 14.5 0.8 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF515 PF04415.12 ORF12928 - 7 4.9 8.4 10 4.4 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) DUF5601 PF18151.1 ORF12872 - 0.013 15.8 0.1 0.025 14.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5601) 23S_rRNA_IVP PF05635.11 ORF12872 - 0.029 14.6 0.2 0.043 14.1 0.1 1.4 1 1 0 1 1 1 0 23S rRNA-intervening sequence protein DUF2076 PF09849.9 ORF1257 - 0.53 10.3 7.3 0.6 10.1 7.3 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) AI-2E_transport PF01594.16 ORF12376 - 0.01 15.0 7.2 0.16 11.1 0.9 1.9 1 1 1 2 2 2 0 AI-2E family transporter DUF505 PF04458.12 ORF12376 - 0.19 10.0 0.0 0.25 9.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) PDR_CDR PF06422.12 ORF12376 - 0.38 10.7 3.3 2.9 7.9 0.2 2.1 1 1 1 2 2 2 0 CDR ABC transporter zf_CCCH_4 PF18345.1 ORF112343 - 0.58 10.3 5.0 2.6 8.2 0.0 2.7 3 0 0 3 3 3 0 Zinc finger domain Bac_export_1 PF01311.20 ORF112200 - 0.00044 19.9 0.3 0.00057 19.5 0.3 1.1 1 0 0 1 1 1 1 Bacterial export proteins, family 1 DUF872 PF05915.12 ORF112200 - 0.071 13.3 0.0 0.086 13.0 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) DUF3232 PF11554.8 ORF109896 - 0.024 15.0 8.3 0.028 14.8 8.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) SlyX PF04102.12 ORF109896 - 0.18 12.4 9.2 0.54 10.9 9.2 1.9 1 1 0 1 1 1 0 SlyX ATG16 PF08614.11 ORF109896 - 1.8 8.7 16.1 0.69 10.1 13.6 1.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Atg14 PF10186.9 ORF109896 - 2.1 7.4 12.9 2.6 7.0 12.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF109896 - 4.5 7.8 19.7 1.1 9.7 0.6 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region Golgin_A5 PF09787.9 ORF109896 - 5.2 6.4 19.7 11 5.4 19.7 1.6 1 1 0 1 1 1 0 Golgin subfamily A member 5 DUF4337 PF14235.6 ORF109896 - 8.3 6.5 9.4 4.8 7.3 7.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) SpoIIIAH PF12685.7 ORF10881 - 0.00021 21.2 0.4 0.00026 20.9 0.4 1.1 1 0 0 1 1 1 1 SpoIIIAH-like protein Zip PF02535.22 ORF10881 - 0.0042 16.4 4.2 0.0046 16.2 4.2 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter OATP PF03137.20 ORF10881 - 0.041 12.2 0.0 0.041 12.2 0.0 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family V_ATPase_I PF01496.19 ORF10881 - 0.042 11.8 0.8 0.046 11.6 0.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ABC2_membrane_3 PF12698.7 ORF10881 - 0.14 11.2 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Sec62 PF03839.16 ORF10881 - 0.17 11.4 2.3 0.21 11.1 2.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 CLN3 PF02487.17 ORF10881 - 0.19 10.7 0.1 0.19 10.7 0.1 1.1 1 0 0 1 1 1 0 CLN3 protein CDP-OH_P_transf PF01066.21 ORF108735 - 2.5e-16 60.2 0.1 3.4e-16 59.8 0.1 1.2 1 0 0 1 1 1 1 CDP-alcohol phosphatidyltransferase DUF1422 PF07226.11 ORF108735 - 0.029 14.4 0.1 0.039 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) Ribosomal_S13 PF00416.22 ORF108599 - 2.2e-40 138.0 0.3 2.6e-40 137.8 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 CAP_C PF08603.11 ORF106937 - 0.024 14.3 1.3 0.033 13.8 0.1 1.7 1 1 0 2 2 2 0 Adenylate cyclase associated (CAP) C terminal Pkinase PF00069.25 ORF106445 - 1.8e-16 60.3 2.2 2e-16 60.2 2.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF106445 - 3.6e-11 42.8 0.3 3.8e-11 42.8 0.3 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Translat_reg PF01818.17 ORF106445 - 0.018 15.0 0.2 0.029 14.4 0.2 1.4 1 0 0 1 1 1 0 Bacteriophage translational regulator RNA_helicase PF00910.22 ORF106112 - 0.0026 18.1 0.0 0.0034 17.7 0.0 1.1 1 0 0 1 1 1 1 RNA helicase ALG11_N PF15924.5 ORF106112 - 0.1 12.6 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus Megourin PF17560.2 ORF105579 - 0.0014 18.8 0.1 0.0021 18.2 0.1 1.3 1 0 0 1 1 1 1 Aphid Megourins DUF2958 PF11171.8 ORF10515 - 0.17 12.2 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2958) MORN PF02493.20 ORF104605 - 9.2e-26 88.2 39.1 9.1e-08 31.6 2.4 6.1 6 0 0 6 6 6 6 MORN repeat DUF1455 PF07306.11 ORF103591 - 0.065 13.2 4.4 0.11 12.4 4.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1455) SbcCD_C PF13558.6 ORF103591 - 0.32 11.2 2.1 7.9 6.8 0.1 2.2 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit KilA-N PF04383.13 ORF102930 - 0.042 13.7 1.1 0.07 13.0 0.2 1.7 2 0 0 2 2 2 0 KilA-N domain Mem_trans PF03547.18 ORF102930 - 0.34 9.3 4.1 0.36 9.2 4.1 1.0 1 0 0 1 1 1 0 Membrane transport protein SID-1_RNA_chan PF13965.6 ORF102930 - 1.3 7.4 4.7 1.4 7.2 4.7 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Trypan_PARP PF05887.11 ORF101908 - 0.13 12.2 2.2 0.16 11.9 2.2 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) ChAPs PF09295.10 ORF100856 - 1.3e-05 24.4 0.2 1.4e-05 24.3 0.2 1.0 1 0 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) Clathrin PF00637.20 ORF100856 - 0.027 14.4 0.4 0.053 13.4 0.4 1.5 1 1 0 1 1 1 0 Region in Clathrin and VPS Nucleoporin_C PF03177.14 ORF100856 - 0.036 12.8 0.1 0.075 11.8 0.1 1.6 1 1 0 1 1 1 0 Non-repetitive/WGA-negative nucleoporin C-terminal DUF4131 PF13567.6 ORF100799 - 0.061 13.0 1.1 0.089 12.4 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) GST_C_3 PF14497.6 ORF100693 - 7.3e-12 45.4 0.6 1e-11 44.9 0.6 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF100693 - 2.5e-07 30.8 0.2 3.4e-07 30.4 0.2 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF100693 - 0.00023 20.9 1.5 0.00025 20.8 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF100693 - 0.00028 20.9 0.0 0.00045 20.2 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Sep15_SelM PF08806.11 ORF100693 - 0.0026 17.9 1.1 1.8 8.8 0.1 3.1 1 1 3 4 4 4 3 Sep15/SelM redox domain DASH_Dam1 PF08653.10 ORF100693 - 0.031 14.1 0.1 0.14 12.0 0.0 1.9 2 0 0 2 2 2 0 DASH complex subunit Dam1 DUF667 PF05018.13 NODE_50510_length_364_cov_1.188450_g42610_i0forward_frame_1 - 0.029 14.1 0.5 0.043 13.5 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF667) DUF2569 PF10754.9 NODE_50509_length_364_cov_1.270517_g42609_i0reverse_frame_1 - 0.02 15.4 0.5 0.029 14.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) He_PIG PF05345.12 NODE_50507_length_364_cov_1.455927_g42607_i0reverse_frame_1 - 0.019 15.2 8.8 0.034 14.3 6.8 2.2 1 1 1 2 2 2 0 Putative Ig domain MG3 PF17791.1 NODE_50507_length_364_cov_1.455927_g42607_i0reverse_frame_1 - 0.07 13.4 0.4 0.13 12.5 0.1 1.6 2 0 0 2 2 2 0 Macroglobulin domain MG3 Filamin PF00630.19 NODE_50499_length_364_cov_1.893617_g42599_i0forward_frame_1 - 4.2e-10 40.4 0.0 7.4e-10 39.6 0.0 1.4 2 0 0 2 2 2 1 Filamin/ABP280 repeat Osw5 PF17062.5 NODE_50495_length_364_cov_1.993921_g42595_i0forward_frame_1 - 0.0033 17.5 2.6 0.0038 17.3 1.8 1.6 1 1 0 1 1 1 1 Outer spore wall 5 DUF4789 PF16033.5 NODE_50492_length_364_cov_2.537994_g42592_i0reverse_frame_1 - 0.026 15.0 1.0 0.038 14.5 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4789) QueF PF14489.6 NODE_50489_length_364_cov_2.696049_g42589_i0reverse_frame_1 - 0.0016 18.6 0.6 0.0034 17.5 0.2 1.8 1 1 1 2 2 2 1 QueF-like protein Arg_tRNA_synt_N PF03485.16 NODE_50487_length_364_cov_2.951368_g42587_i0reverse_frame_1 - 3.7e-11 43.5 0.2 4.8e-11 43.1 0.2 1.2 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain PKD_3 PF16820.5 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_1 - 0.068 12.9 0.2 2.2 8.1 0.1 2.2 1 1 1 2 2 2 0 PKD-like domain RIFIN PF02009.16 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.00052 20.0 4.3 0.00052 20.0 4.3 1.4 1 1 1 2 2 2 1 Rifin Orf78 PF06024.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0023 18.2 10.3 0.0023 18.2 10.3 1.9 1 1 1 2 2 2 1 Orf78 (ac78) Peptidase_M56 PF05569.11 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0038 16.5 0.6 0.004 16.4 0.6 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF5383 PF17355.2 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0041 17.5 1.0 0.0071 16.7 1.0 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5383) DUF5362 PF17319.2 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0078 16.0 0.2 0.012 15.5 0.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5362) DUF4366 PF14283.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0087 16.1 1.0 0.0087 16.1 1.0 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4366) JTB PF05439.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0092 16.0 0.3 0.012 15.7 0.3 1.2 1 0 0 1 1 1 1 Jumping translocation breakpoint protein (JTB) LRRC37AB_C PF14914.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.013 15.4 2.3 0.017 15.0 2.3 1.2 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain DUF2615 PF11027.8 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.013 15.6 4.0 0.013 15.6 4.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2615) EphA2_TM PF14575.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.014 16.3 0.1 0.014 16.3 0.1 2.2 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF1180 PF06679.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.019 15.4 2.6 0.019 15.4 2.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1180) DUF2500 PF10694.9 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.02 15.4 0.4 0.02 15.4 0.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) Ctr PF04145.15 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.023 15.3 1.7 0.023 15.3 1.7 1.7 1 1 1 2 2 2 0 Ctr copper transporter family Glucos_trans_II PF14264.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.024 14.0 0.1 0.027 13.8 0.1 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII DUF5385 PF17359.2 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.038 13.5 1.8 0.038 13.5 1.8 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5385) SARAF PF06682.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.055 13.1 9.1 0.14 11.8 8.5 1.7 1 1 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis CSG2 PF16965.5 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.18 10.7 4.3 0.22 10.4 4.3 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator Renin_r PF07850.14 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.18 12.4 4.4 0.24 12.0 4.2 1.4 1 1 0 1 1 1 0 Renin receptor-like protein HCO3_cotransp PF00955.21 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.2 10.4 4.3 0.2 10.4 4.3 1.1 1 0 0 1 1 1 0 HCO3- transporter family Connexin PF00029.19 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.21 11.3 1.7 0.22 11.3 1.0 1.4 1 1 0 1 1 1 0 Connexin Pox_EPC_I2-L1 PF12575.8 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.37 11.0 5.6 0.13 12.5 2.1 2.0 1 1 1 2 2 2 0 Poxvirus entry protein complex L1 and I2 TMEM154 PF15102.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.4 10.6 18.6 0.19 11.6 14.9 2.1 1 1 1 2 2 2 0 TMEM154 protein family DUF4834 PF16118.5 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.68 10.9 0.1 0.68 10.9 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4834) ABC2_membrane_3 PF12698.7 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.72 8.9 8.9 0.97 8.5 8.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Kei1 PF08552.11 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.97 9.3 3.8 0.39 10.6 1.5 1.5 1 1 1 2 2 2 0 Inositolphosphorylceramide synthase subunit Kei1 Shisa PF13908.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 1.6 8.9 14.5 2.4 8.3 11.1 2.0 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator Macoilin PF09726.9 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 2.7 6.5 12.5 2.8 6.4 12.5 1.0 1 0 0 1 1 1 0 Macoilin family DUF3671 PF12420.8 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 3.7 7.7 6.8 7 6.8 6.7 1.6 1 1 0 1 1 1 0 Protein of unknown function zf-C3HC4_2 PF13923.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 1.8e-06 27.7 3.2 2.8e-06 27.0 3.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 8.4e-05 22.8 6.3 0.00013 22.3 6.3 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.00039 20.7 1.0 0.00073 19.8 1.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.00068 19.6 4.2 0.0015 18.5 4.2 1.7 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.0014 18.5 3.3 0.002 18.0 3.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.003 17.4 4.1 0.0049 16.7 4.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.029 14.3 3.5 0.05 13.6 3.5 1.4 1 0 0 1 1 1 0 zinc-RING finger domain Ribosomal_L21p PF00829.21 NODE_50458_length_364_cov_75.808511_g42558_i0reverse_frame_1 - 0.035 14.4 2.2 0.16 12.2 2.9 1.7 2 0 0 2 2 2 0 Ribosomal prokaryotic L21 protein Pacs-1 PF10254.9 NODE_50458_length_364_cov_75.808511_g42558_i0reverse_frame_1 - 0.056 12.4 1.4 0.059 12.3 1.4 1.2 1 0 0 1 1 1 0 PACS-1 cytosolic sorting protein FixQ PF05545.11 NODE_50458_length_364_cov_75.808511_g42558_i0forward_frame_1 - 0.019 14.9 3.0 0.03 14.3 3.0 1.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ SelK_SelG PF10961.8 NODE_50458_length_364_cov_75.808511_g42558_i0forward_frame_1 - 0.19 12.3 0.9 0.29 11.8 0.9 1.3 1 1 0 1 1 1 0 Selenoprotein SelK_SelG CopC PF04234.12 NODE_50456_length_364_cov_85.951368_g42556_i0reverse_frame_1 - 0.13 13.3 0.0 0.2 12.7 0.0 1.4 1 0 0 1 1 1 0 CopC domain EF-hand_1 PF00036.32 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 5.2e-07 28.8 0.3 9.8e-07 27.9 0.3 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 2.5e-06 26.9 0.1 5.8e-06 25.8 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 3.2e-05 24.3 0.1 4.2e-05 23.9 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 5.5e-05 22.9 0.7 9.4e-05 22.2 0.6 1.5 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 0.0002 20.7 0.4 0.0004 19.8 0.4 1.5 1 0 0 1 1 1 1 EF hand EF-hand_4 PF12763.7 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 0.049 13.6 0.2 0.078 12.9 0.2 1.3 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand P16-Arc PF04699.14 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 0.052 14.0 0.2 0.062 13.8 0.2 1.1 1 0 0 1 1 1 0 ARP2/3 complex 16 kDa subunit (p16-Arc) IF2_N PF04760.15 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 0.089 12.6 0.5 1.1 9.1 0.1 2.5 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region TPR_11 PF13414.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 1.9e-19 69.0 5.3 2e-09 37.0 0.1 3.3 2 2 1 3 3 3 3 TPR repeat TPR_2 PF07719.17 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 3e-18 64.4 0.9 4.3e-07 29.5 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 1.5e-16 59.4 3.4 1.3e-06 28.0 0.1 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 2.1e-15 55.9 1.2 2.3e-07 30.7 0.1 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 4.3e-11 42.1 2.3 0.00021 21.3 0.1 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 8.5e-09 35.8 0.1 0.00032 21.2 0.0 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 8.4e-07 29.2 0.3 0.00024 21.3 0.0 2.4 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 1.5e-06 27.8 0.1 0.005 16.8 0.0 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 1.9e-05 25.2 0.0 0.00011 22.8 0.0 1.9 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 2.9e-05 23.4 0.0 0.00012 21.4 0.0 1.9 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 9e-05 23.0 0.0 0.17 12.8 0.0 2.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.00013 22.4 0.1 0.98 10.2 0.0 3.4 4 0 0 4 4 3 1 Tetratricopeptide repeat EST1_DNA_bind PF10373.9 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.00054 19.5 0.7 0.00056 19.5 0.7 1.1 1 0 0 1 1 1 1 Est1 DNA/RNA binding domain TPR_9 PF13371.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.0055 16.8 0.0 0.029 14.5 0.0 1.8 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_20 PF14561.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.0056 17.0 0.2 1.8 8.9 0.0 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat NARP1 PF12569.8 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.016 14.2 0.1 0.023 13.7 0.1 1.2 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TOM20_plant PF06552.12 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.03 14.1 0.2 0.037 13.8 0.2 1.3 1 1 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 ANAPC3 PF12895.7 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.054 13.7 0.5 0.19 12.0 0.3 1.8 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 Ycf34 PF10718.9 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.082 13.6 0.1 0.19 12.4 0.1 1.6 1 1 1 2 2 2 0 Hypothetical chloroplast protein Ycf34 MIT PF04212.18 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 5.7 7.1 7.6 3.5 7.8 0.4 3.0 3 1 0 3 3 3 0 MIT (microtubule interacting and transport) domain ThiS PF02597.20 NODE_50444_length_364_cov_170.525836_g42544_i0forward_frame_1 - 4.2e-09 36.9 0.0 5.5e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 ThiS family SplA PF11132.8 NODE_50444_length_364_cov_170.525836_g42544_i0forward_frame_1 - 0.012 15.4 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator protein (SplA) Thiolase_C PF02803.18 NODE_50440_length_364_cov_3974.787234_g42540_i0reverse_frame_1 - 0.16 11.6 1.0 0.23 11.1 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain UPF0203 PF05254.12 NODE_50434_length_365_cov_1.842424_g42534_i0forward_frame_1 - 0.03 14.6 0.2 0.069 13.4 0.0 1.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0203) GST_C_6 PF17171.4 NODE_50431_length_365_cov_1.903030_g42531_i0reverse_frame_1 - 0.0049 16.6 0.2 0.019 14.7 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 NODE_50431_length_365_cov_1.903030_g42531_i0reverse_frame_1 - 0.011 16.5 0.1 0.038 14.7 0.1 1.8 2 0 0 2 2 2 0 Glutathione S-transferase N-terminal domain Tautomerase PF01361.21 NODE_50428_length_365_cov_2.030303_g42528_i0reverse_frame_1 - 0.15 12.0 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Tautomerase enzyme DUF2766 PF10964.8 NODE_50423_length_365_cov_2.245455_g42523_i0forward_frame_1 - 7.6e-07 29.0 0.3 1.2e-06 28.4 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2766) DUF4524 PF15025.6 NODE_50419_length_365_cov_2.457576_g42519_i0forward_frame_1 - 0.035 13.9 0.1 0.042 13.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4524) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks189.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks189.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks189.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks189.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Laminin_G_3 PF13385.6 ORF26367 - 3.4e-06 27.3 0.3 8.1e-06 26.1 0.3 1.6 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Peptidase_S10 PF00450.22 ORF18990 - 3e-102 343.2 3.9 3.5e-102 342.9 3.9 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase DUF1283 PF06932.11 ORF18990 - 0.16 12.2 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) ERG4_ERG24 PF01222.17 ORF1614 - 9.4e-66 222.3 14.7 1.4e-42 146.0 9.4 2.0 2 0 0 2 2 2 2 Ergosterol biosynthesis ERG4/ERG24 family DUF1295 PF06966.12 ORF1614 - 0.00036 20.1 1.5 0.0012 18.4 1.5 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) Na_Ala_symp PF01235.17 ORF15428 - 6.8e-142 473.4 25.1 8e-142 473.2 25.1 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family EMP70 PF02990.16 ORF15428 - 0.0016 17.2 2.5 0.0016 17.2 2.5 2.4 2 1 1 3 3 3 1 Endomembrane protein 70 AdoHcyase PF05221.17 ORF111765 - 1.5e-136 454.5 0.0 1.7e-136 454.3 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 ORF111765 - 5.4e-80 267.2 1.7 9.1e-80 266.4 1.7 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 ORF111765 - 1e-07 31.5 0.1 2.1e-07 30.5 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 ORF111765 - 0.0011 18.6 0.0 0.0021 17.7 0.0 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain THF_DHG_CYH_C PF02882.19 ORF111765 - 0.019 14.3 0.7 0.074 12.4 0.7 1.9 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aminotran_5 PF00266.19 ORF111765 - 0.11 11.5 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-V NAD_binding_7 PF13241.6 ORF111765 - 0.15 12.5 0.2 0.37 11.2 0.2 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding ERG4_ERG24 PF01222.17 ORF10918 - 9.4e-66 222.3 14.7 1.4e-42 146.0 9.4 2.0 2 0 0 2 2 2 2 Ergosterol biosynthesis ERG4/ERG24 family DUF1295 PF06966.12 ORF10918 - 0.00036 20.1 1.5 0.0012 18.4 1.5 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) P2X_receptor PF00864.19 ORF105400 - 1.9e-07 30.5 0.0 0.00034 19.8 0.0 2.3 2 0 0 2 2 2 2 ATP P2X receptor Glyco_hydro_31 PF01055.26 ORF100152 - 5.4e-74 250.0 2.5 6.5e-74 249.7 2.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF3989 PF13150.6 NODE_9123_length_1427_cov_262.732040_g3293_i2reverse_frame_3 - 4.6 7.1 6.9 0.67 9.7 1.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) Pkinase PF00069.25 ORF95398 - 1.5e-50 172.1 0.0 1.9e-50 171.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95398 - 2.1e-33 115.7 0.0 3.1e-33 115.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF95398 - 6.7e-06 25.6 0.0 1.3e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF95398 - 0.019 14.9 0.3 0.51 10.2 0.0 2.4 2 0 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF95398 - 0.028 13.2 0.0 0.04 12.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase DEAD PF00270.29 ORF78543 - 1.4e-26 93.3 0.2 3.4e-26 92.1 0.1 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF78543 - 7.2e-24 84.3 0.2 2.4e-23 82.6 0.2 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF78543 - 2e-07 31.2 7.8 2.4e-07 30.9 0.3 2.7 2 1 1 3 3 3 2 Type III restriction enzyme, res subunit AAA_30 PF13604.6 ORF78543 - 0.007 16.1 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain FKBP26_C PF18046.1 ORF78543 - 0.16 12.1 4.7 0.12 12.4 1.2 2.8 3 0 0 3 3 3 0 FKBP26_C-terminal Baculo_PEP_C PF04513.12 ORF77217 - 0.06 13.4 7.9 13 5.8 0.1 4.5 4 1 0 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF948 PF06103.11 ORF77217 - 0.43 10.9 3.5 5 7.5 0.2 3.6 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Peptidase_S10 PF00450.22 ORF67124 - 8.5e-70 236.3 2.0 1.8e-69 235.2 2.0 1.4 1 1 0 1 1 1 1 Serine carboxypeptidase Nop PF01798.18 ORF56517 - 3.7e-82 275.2 1.0 3.7e-82 275.2 1.0 1.9 2 0 0 2 2 2 1 snoRNA binding domain, fibrillarin NOP5NT PF08156.13 ORF56517 - 0.13 12.6 0.0 0.13 12.6 0.0 2.6 2 0 0 2 2 2 0 NOP5NT (NUC127) domain Trypan_PARP PF05887.11 ORF56517 - 0.15 12.1 18.6 0.26 11.3 18.6 1.4 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) RNA_polI_A34 PF08208.11 ORF56517 - 2.3 8.3 42.6 6.4 6.8 41.8 2.0 1 1 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF2201_N PF13203.6 ORF56517 - 2.3 7.7 11.1 4.2 6.9 11.1 1.4 1 0 0 1 1 1 0 Putative metallopeptidase domain Asp PF00026.23 ORF49628 - 1.1e-29 103.9 0.5 8.9e-14 51.6 0.2 2.5 2 1 0 2 2 2 2 Eukaryotic aspartyl protease gag-asp_proteas PF13975.6 ORF49628 - 0.052 14.1 0.2 5.3 7.7 0.1 2.6 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 ORF49628 - 0.066 13.9 0.6 4.5 8.0 0.1 2.6 2 0 0 2 2 2 0 Aspartyl protease TAXi_N PF14543.6 ORF49628 - 0.34 11.1 3.0 3.2 7.9 0.2 2.9 1 1 2 3 3 3 0 Xylanase inhibitor N-terminal Apolipoprotein PF01442.18 ORF3387 - 0.12 12.2 9.1 0.033 14.1 1.0 3.0 3 0 0 3 3 3 0 Apolipoprotein A1/A4/E domain Fzo_mitofusin PF04799.13 ORF3387 - 0.18 11.3 8.4 4.2 6.9 3.2 3.0 1 1 0 2 2 2 0 fzo-like conserved region Mnd1 PF03962.15 ORF3387 - 0.62 10.4 5.9 11 6.4 0.0 3.9 4 0 0 4 4 4 0 Mnd1 HTH domain DUF1664 PF07889.12 ORF3387 - 0.72 9.9 26.5 0.32 11.0 6.2 4.9 3 1 1 5 5 5 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 ORF3387 - 1.2 9.2 21.8 0.82 9.7 1.1 4.1 2 1 3 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1548 PF07579.11 ORF3387 - 3.1 8.1 15.0 0.28 11.5 4.2 3.3 2 2 1 3 3 3 0 Domain of Unknown Function (DUF1548) Exonuc_VII_L PF02601.15 ORF3387 - 3.9 6.9 17.5 9e+03 -4.1 17.5 3.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit Peptidase_C69 PF03577.15 ORF25051 - 8.4e-63 212.7 0.0 1e-62 212.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family C69 UVR PF02151.19 ORF105182 - 0.018 14.7 1.9 0.018 14.7 1.9 2.7 2 0 0 2 2 2 0 UvrB/uvrC motif Urocanase_N PF17391.2 ORF105182 - 0.11 12.2 0.0 0.24 11.1 0.0 1.5 1 0 0 1 1 1 0 Urocanase N-terminal domain Condensation PF00668.20 ORF10286 - 0.02 13.6 0.0 1.3 7.6 0.0 2.3 2 0 0 2 2 2 0 Condensation domain DUF902 PF06001.13 NODE_9230_length_1420_cov_294.166065_g3440_i1forward_frame_1 - 0.17 12.4 5.1 14 6.2 0.8 3.5 2 1 0 2 2 2 0 Domain of Unknown Function (DUF902) YyzF PF14116.6 NODE_9162_length_1424_cov_220.182865_g1046_i4reverse_frame_2 - 0.012 15.6 0.3 0.028 14.4 0.3 1.6 1 0 0 1 1 1 0 YyzF-like protein Mu-like_Pro PF10123.9 NODE_9162_length_1424_cov_220.182865_g1046_i4reverse_frame_2 - 0.029 14.0 0.3 0.029 14.0 0.3 2.0 2 0 0 2 2 2 0 Mu-like prophage I protein Hydrolase_3 PF08282.12 ORF99203 - 0.003 17.3 0.0 0.0046 16.7 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF99203 - 0.032 14.5 0.4 4.3 7.6 0.0 3.0 2 2 1 3 3 3 0 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF99203 - 0.086 13.0 0.0 0.23 11.6 0.0 1.7 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase GTP_EFTU PF00009.27 ORF98415 - 7.2e-44 149.7 0.1 1e-43 149.2 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF98415 - 7.5e-14 52.0 0.0 1.3e-12 48.1 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF98415 - 4.2e-12 46.3 0.1 5.6e-11 42.7 0.0 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF98415 - 0.00074 19.6 0.4 0.013 15.6 0.1 2.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 ORF98415 - 0.0021 17.9 0.1 0.0071 16.2 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Dynamin_N PF00350.23 ORF98415 - 0.17 11.9 0.1 62 3.6 0.1 3.1 3 0 0 3 3 3 0 Dynamin family Metallophos PF00149.28 ORF9468 - 4.2e-14 53.5 2.5 6.6e-14 52.9 2.5 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase LBP_BPI_CETP_C PF02886.17 ORF92289 - 0.00038 20.0 0.2 0.0016 17.9 0.2 2.2 1 1 0 1 1 1 1 LBP / BPI / CETP family, C-terminal domain PP-binding PF00550.25 ORF83567 - 3.1e-10 40.3 0.0 6.2e-10 39.3 0.0 1.6 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_12 PF13424.6 ORF83567 - 1.3e-07 31.8 5.2 0.00023 21.4 0.7 4.7 6 0 0 6 6 6 2 Tetratricopeptide repeat SNAP PF14938.6 ORF83567 - 0.016 14.6 18.4 0.22 10.9 2.1 3.1 1 1 1 3 3 3 0 Soluble NSF attachment protein, SNAP TPR_1 PF00515.28 ORF83567 - 0.059 13.2 5.4 0.94 9.4 0.1 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat Orn_Arg_deC_N PF02784.16 ORF83567 - 0.097 12.0 0.1 0.19 11.1 0.1 1.5 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DUF2564 PF10819.8 ORF83567 - 0.43 11.0 0.1 0.43 11.0 0.1 3.6 4 1 1 5 5 5 0 Protein of unknown function (DUF2564) TPR_8 PF13181.6 ORF83567 - 1.6 9.1 9.8 19 5.8 0.3 5.8 7 0 0 7 7 7 0 Tetratricopeptide repeat Fumble PF03630.14 ORF82885 - 4.6e-85 285.7 0.0 5.4e-85 285.5 0.0 1.0 1 0 0 1 1 1 1 Fumble NOP19 PF10863.8 ORF82885 - 0.052 13.4 0.0 0.099 12.5 0.0 1.4 1 0 0 1 1 1 0 Nucleolar protein 19 p450 PF00067.22 ORF79759 - 1.4e-56 192.2 2.3 1.8e-56 191.8 2.3 1.0 1 0 0 1 1 1 1 Cytochrome P450 Exog_C PF18026.1 ORF79759 - 0.012 15.7 0.1 0.032 14.3 0.1 1.7 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain GTP_EFTU PF00009.27 ORF76192 - 7.2e-44 149.7 0.1 1e-43 149.2 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF76192 - 7.5e-14 52.0 0.0 1.3e-12 48.1 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF76192 - 4.2e-12 46.3 0.1 5.6e-11 42.7 0.0 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF76192 - 0.00074 19.6 0.4 0.013 15.6 0.1 2.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 ORF76192 - 0.0021 17.9 0.1 0.0071 16.2 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Dynamin_N PF00350.23 ORF76192 - 0.17 11.9 0.1 62 3.6 0.1 3.1 3 0 0 3 3 3 0 Dynamin family GTP_EFTU PF00009.27 ORF72005 - 7.2e-44 149.7 0.1 1e-43 149.2 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF72005 - 7.5e-14 52.0 0.0 1.3e-12 48.1 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF72005 - 4.2e-12 46.3 0.1 5.6e-11 42.7 0.0 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF72005 - 0.00074 19.6 0.4 0.013 15.6 0.1 2.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 ORF72005 - 0.0021 17.9 0.1 0.0071 16.2 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Dynamin_N PF00350.23 ORF72005 - 0.17 11.9 0.1 62 3.6 0.1 3.1 3 0 0 3 3 3 0 Dynamin family Sec23_trunk PF04811.15 ORF69276 - 5.1e-09 36.1 0.2 3.6e-08 33.3 0.2 2.2 1 1 0 1 1 1 1 Sec23/Sec24 trunk domain VWA_2 PF13519.6 ORF69276 - 0.0015 19.1 0.2 0.095 13.4 0.0 3.4 3 1 0 3 3 3 1 von Willebrand factor type A domain ARID PF01388.21 ORF69276 - 0.021 15.5 0.0 0.07 13.8 0.0 2.0 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain Sec23_BS PF08033.12 ORF69276 - 0.095 13.5 0.0 0.22 12.3 0.0 1.7 1 0 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain UCH PF00443.29 ORF66612 - 1.6e-30 106.4 0.1 2.6e-30 105.8 0.0 1.3 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 ORF66612 - 1.9e-07 31.3 0.0 3.2e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein UCH_1 PF13423.6 ORF66612 - 0.029 14.0 0.0 0.1 12.2 0.0 1.8 1 1 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase HMG_box PF00505.19 ORF65238 - 4.8e-17 62.1 7.7 4.8e-17 62.1 7.7 3.0 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF65238 - 3.6e-11 43.5 7.7 3.6e-11 43.5 7.7 3.9 4 0 0 4 4 4 1 HMG-box domain GCFC PF07842.12 ORF64123 - 5.4e-56 190.2 6.3 5.4e-56 190.2 6.3 1.6 2 0 0 2 2 2 1 GC-rich sequence DNA-binding factor-like protein NYN PF01936.18 ORF59505 - 0.0025 18.3 0.0 0.0046 17.4 0.0 1.4 1 0 0 1 1 1 1 NYN domain Complex1_51K PF01512.17 ORF47797 - 1.3e-44 151.7 0.0 2.3e-44 150.9 0.0 1.4 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.9 ORF47797 - 1e-31 108.8 0.1 1.8e-31 108.0 0.1 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SLBB PF10531.9 ORF47797 - 1.7e-09 37.4 0.0 3.1e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 SLBB domain Peptidase_S9 PF00326.21 ORF46693 - 0.1 12.1 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Prolyl oligopeptidase family EF-hand_6 PF13405.6 ORF43584 - 0.00062 19.5 0.0 0.002 17.9 0.0 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF43584 - 0.00086 19.7 0.0 0.011 16.2 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF43584 - 0.012 15.1 0.0 0.043 13.4 0.0 2.0 1 0 0 1 1 1 0 EF hand NOG1_N PF17835.1 ORF43584 - 0.36 10.8 4.3 2.5 8.0 0.1 2.6 1 1 1 2 2 2 0 NOG1 N-terminal helical domain CBFD_NFYB_HMF PF00808.23 ORF43584 - 6.8 7.1 12.4 2.5e+02 2.1 14.0 2.9 2 1 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Metallophos PF00149.28 ORF23355 - 4.3e-14 53.5 2.5 6.7e-14 52.9 2.5 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase HMG_box PF00505.19 ORF21443 - 4.8e-17 62.1 7.7 4.8e-17 62.1 7.7 3.0 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF21443 - 3.6e-11 43.5 7.7 3.6e-11 43.5 7.7 3.9 4 0 0 4 4 4 1 HMG-box domain DUF2935 PF11155.8 ORF21390 - 0.026 14.8 8.7 0.4 11.0 3.2 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) FtsK_alpha PF17854.1 ORF21390 - 0.027 14.6 1.2 0.28 11.3 0.0 2.9 2 2 0 2 2 2 0 FtsK alpha domain DUF1690 PF07956.11 ORF21390 - 0.4 11.1 12.7 1 9.8 8.8 2.6 2 0 0 2 2 2 0 Protein of Unknown function (DUF1690) ApoLp-III PF07464.11 ORF21390 - 0.46 10.6 8.3 3 7.9 0.7 2.8 2 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) FRB_dom PF08771.11 ORF21390 - 0.83 10.1 9.1 0.25 11.8 1.7 2.9 2 1 0 2 2 2 0 FKBP12-rapamycin binding domain Period_C PF12114.8 ORF21390 - 1.9 8.0 5.3 1.3 8.6 1.4 2.2 2 0 0 2 2 2 0 Period protein 2/3C-terminal region DUF5601 PF18151.1 ORF21390 - 2.1 8.7 7.3 2.2 8.6 0.4 3.5 2 1 0 3 3 3 0 Domain of unknown function (DUF5601) OmpH PF03938.14 ORF21390 - 2.4 8.5 20.1 13 6.1 0.4 2.7 2 1 0 2 2 2 0 Outer membrane protein (OmpH-like) Helicase_IV_N PF12462.8 ORF21390 - 3.4 7.6 6.9 4.9 7.1 0.7 2.3 2 0 0 2 2 2 0 DNA helicase IV / RNA helicase N terminal Fzo_mitofusin PF04799.13 ORF21390 - 4.8 6.7 7.5 2.6 7.6 4.1 2.1 2 0 0 2 2 2 0 fzo-like conserved region RCC1_2 PF13540.6 ORF19427 - 4.6e-11 42.2 37.9 0.32 10.9 0.1 10.4 10 1 0 10 10 10 6 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF19427 - 7.6e-05 23.0 8.1 18 5.8 0.0 7.7 3 2 6 9 9 9 1 TFIIH p62 subunit, N-terminal domain ubiquitin PF00240.23 ORF19427 - 0.012 15.4 0.0 0.033 13.9 0.0 1.8 1 1 0 1 1 1 0 Ubiquitin family Eno-Rase_NADH_b PF12242.8 ORF19427 - 0.089 12.6 9.0 0.39 10.5 0.1 5.2 2 2 6 8 8 8 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XRCC1_N PF01834.16 ORF19427 - 0.14 12.2 2.7 1.3e+02 2.5 0.0 5.1 2 1 4 7 7 7 0 XRCC1 N terminal domain Ysc84 PF04366.12 ORF19427 - 0.19 11.5 11.5 0.5 10.1 0.5 3.5 3 0 0 3 3 3 0 Las17-binding protein actin regulator Methyltransf_29 PF03141.16 ORF19427 - 0.32 9.5 2.2 40 2.6 0.1 4.1 5 0 0 5 5 5 0 Putative S-adenosyl-L-methionine-dependent methyltransferase HATPase_c PF02518.26 ORF112540 - 5e-18 65.6 0.0 9.4e-18 64.8 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF112540 - 4.1e-11 42.7 0.2 9.8e-11 41.5 0.2 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 ORF112540 - 2.9e-09 37.2 0.1 1.6e-06 28.4 0.0 2.6 2 0 0 2 2 2 2 HAMP domain sCache_3_2 PF17203.4 ORF112540 - 1.2e-06 28.7 0.3 4.2e-06 26.9 0.0 2.1 2 0 0 2 2 2 1 Single cache domain 3 HATPase_c_5 PF14501.6 ORF112540 - 0.00039 20.3 0.0 0.00088 19.1 0.0 1.5 1 0 0 1 1 1 1 GHKL domain dCache_1 PF02743.18 ORF112540 - 0.0028 17.5 0.0 0.0062 16.4 0.0 1.5 1 0 0 1 1 1 1 Cache domain HATPase_c_3 PF13589.6 ORF112540 - 0.012 15.5 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF PF01590.26 ORF112540 - 0.021 15.4 0.0 0.073 13.7 0.0 1.9 1 0 0 1 1 1 0 GAF domain GAF_2 PF13185.6 ORF112540 - 0.032 14.5 0.0 0.16 12.3 0.0 2.1 2 0 0 2 2 2 0 GAF domain HATPase_c_2 PF13581.6 ORF112540 - 0.036 14.0 0.0 0.1 12.6 0.0 1.8 1 1 0 1 1 1 0 Histidine kinase-like ATPase domain NolV PF06635.12 ORF112540 - 0.045 13.1 0.4 0.081 12.3 0.4 1.3 1 0 0 1 1 1 0 Nodulation protein NolV GAF_3 PF13492.6 ORF112540 - 0.054 13.8 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 GAF domain Pkinase PF00069.25 ORF110920 - 0.00021 20.8 0.4 0.0038 16.6 0.0 2.4 2 1 0 2 2 2 1 Protein kinase domain TAF4 PF05236.14 ORF110920 - 0.075 12.8 2.9 0.1 12.4 2.9 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family Asparaginase_C PF17763.1 ORF110920 - 0.14 12.4 0.1 0.62 10.3 0.0 2.1 2 0 0 2 2 2 0 Glutaminase/Asparaginase C-terminal domain APH PF01636.23 ORF110920 - 0.24 11.3 0.0 0.24 11.3 0.0 1.8 2 0 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 ORF110920 - 0.3 10.3 2.6 0.65 9.2 0.0 2.5 3 0 0 3 3 3 0 Protein tyrosine kinase HNH_5 PF14279.6 ORF107579 - 0.001 18.9 0.1 0.0018 18.1 0.1 1.4 1 0 0 1 1 1 1 HNH endonuclease PFOR_II PF17147.4 ORF100733 - 0.028 14.7 0.1 0.61 10.4 0.0 2.7 2 0 0 2 2 2 0 Pyruvate:ferredoxin oxidoreductase core domain II Cornifin PF02389.15 NODE_9230_length_1420_cov_294.166065_g3440_i1reverse_frame_3 - 4.6e-06 26.9 17.7 0.0026 18.0 3.0 3.1 1 1 2 3 3 3 3 Cornifin (SPRR) family FGGY_C PF02782.16 ORF96254 - 5e-23 81.9 0.0 7.9e-23 81.2 0.0 1.3 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 ORF96254 - 2e-14 53.7 0.0 8.4e-07 28.8 0.0 2.2 1 1 1 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain C2 PF00168.30 ORF91494 - 0.072 13.4 0.0 0.21 11.9 0.0 1.8 1 0 0 1 1 1 0 C2 domain p450 PF00067.22 ORF62304 - 1.1e-49 169.4 0.6 1.6e-49 168.9 0.6 1.2 1 0 0 1 1 1 1 Cytochrome P450 SlyX PF04102.12 ORF60759 - 0.3 11.7 5.5 16 6.2 0.0 3.9 3 1 0 3 3 3 0 SlyX ATP-grasp_5 PF13549.6 ORF55717 - 3.8e-80 268.5 0.1 5.7e-80 267.9 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain Acetyltransf_1 PF00583.25 ORF55717 - 1.5e-08 34.9 0.0 2.6e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF55717 - 0.0001 22.7 0.0 0.00029 21.2 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF55717 - 0.0016 18.4 0.0 0.0037 17.2 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 ORF55717 - 0.0019 18.2 0.0 0.022 14.7 0.0 2.3 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain ATP-grasp_2 PF08442.10 ORF55717 - 0.0031 17.1 0.2 0.0066 16.0 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp domain Acetyltransf_4 PF13420.7 ORF55717 - 0.05 13.7 0.0 0.29 11.3 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain CPSase_L_D2 PF02786.17 ORF55717 - 0.081 12.4 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Carbam_trans_C PF16861.5 ORF44183 - 6.1e-51 172.4 0.0 1.8e-50 170.9 0.0 1.6 2 0 0 2 2 2 1 Carbamoyltransferase C-terminus Carbam_trans_N PF02543.15 ORF44183 - 3.1e-08 33.7 0.0 9e-08 32.1 0.0 1.8 1 1 0 1 1 1 1 Carbamoyltransferase N-terminus DUF5308 PF17233.2 ORF41859 - 0.0011 19.3 1.6 0.0011 19.3 1.6 2.2 2 0 0 2 2 2 1 Family of unknown function (DUF5308) U79_P34 PF03064.16 ORF41859 - 0.78 9.1 6.1 1.4 8.2 6.1 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 BAF1_ABF1 PF04684.13 ORF41859 - 6.4 5.7 14.8 0.015 14.4 0.8 2.0 2 0 0 2 2 2 0 BAF1 / ABF1 chromatin reorganising factor ATP-grasp_5 PF13549.6 ORF26307 - 3.8e-80 268.5 0.1 5.7e-80 267.9 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain Acetyltransf_1 PF00583.25 ORF26307 - 1.5e-08 34.9 0.0 2.6e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF26307 - 0.0001 22.7 0.0 0.00029 21.2 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF26307 - 0.0016 18.4 0.0 0.0037 17.2 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 ORF26307 - 0.0019 18.2 0.0 0.022 14.7 0.0 2.3 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain ATP-grasp_2 PF08442.10 ORF26307 - 0.0031 17.1 0.2 0.0066 16.0 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp domain Acetyltransf_4 PF13420.7 ORF26307 - 0.05 13.7 0.0 0.29 11.3 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain CPSase_L_D2 PF02786.17 ORF26307 - 0.081 12.4 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain PTS_EIIC PF02378.18 ORF22419 - 1.9e-31 109.3 24.7 1.9e-31 109.3 24.7 1.8 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 ORF22419 - 6.6e-11 41.5 0.1 1.2e-10 40.7 0.1 1.4 1 0 0 1 1 1 1 phosphotransferase system, EIIB DUF4044 PF13253.6 ORF22419 - 4.4 6.9 7.8 3.7 7.2 0.3 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4044) ZZ PF00569.17 ORF108369 - 6.5e-13 48.3 2.7 6.5e-13 48.3 2.7 1.8 2 0 0 2 2 2 1 Zinc finger, ZZ type PB1 PF00564.24 ORF108369 - 6.5e-12 45.2 0.0 1.6e-11 44.0 0.0 1.7 1 0 0 1 1 1 1 PB1 domain N_BRCA1_IG PF16158.5 ORF108369 - 2.1e-05 25.2 0.0 6.1e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene TehB PF03848.14 ORF108369 - 0.015 14.7 0.5 0.072 12.5 0.0 2.2 1 1 1 2 2 2 0 Tellurite resistance protein TehB ERCC3_RAD25_C PF16203.5 ORF108369 - 0.019 14.2 0.4 0.039 13.1 0.2 1.6 1 1 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase C1_2 PF03107.16 ORF108369 - 0.03 14.6 0.7 0.03 14.6 0.7 2.3 3 0 0 3 3 3 0 C1 domain HopJ PF08888.11 ORF108369 - 0.1 12.8 2.3 2.3 8.5 0.1 2.4 2 0 0 2 2 2 0 HopJ type III effector protein DUF5308 PF17233.2 ORF101333 - 0.0011 19.3 1.6 0.0011 19.3 1.6 2.2 2 0 0 2 2 2 1 Family of unknown function (DUF5308) U79_P34 PF03064.16 ORF101333 - 0.78 9.1 6.1 1.4 8.2 6.1 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 BAF1_ABF1 PF04684.13 ORF101333 - 6.4 5.7 14.8 0.015 14.4 0.8 2.0 2 0 0 2 2 2 0 BAF1 / ABF1 chromatin reorganising factor FAD_binding_7 PF03441.14 ORF101220 - 1.5e-85 285.8 3.4 2.6e-85 285.0 3.4 1.4 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.18 ORF101220 - 3.6e-47 160.4 0.4 8.2e-47 159.3 0.2 1.7 2 0 0 2 2 2 1 DNA photolyase Arm-DNA-bind_2 PF12167.8 NODE_9276_length_1418_cov_73.245119_g6805_i0forward_frame_3 - 0.17 11.8 1.3 0.32 10.9 0.5 1.9 2 0 0 2 2 2 0 Arm DNA-binding domain Peptidase_M24 PF00557.24 ORF99267 - 1.9e-45 155.2 0.0 2.6e-45 154.7 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 NPR3 PF03666.13 ORF99267 - 2 7.1 7.9 91 1.6 10.4 1.9 2 0 0 2 2 2 0 Nitrogen Permease regulator of amino acid transport activity 3 Peptidase_M24 PF00557.24 ORF96921 - 1.9e-45 155.2 0.0 2.6e-45 154.7 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 NPR3 PF03666.13 ORF96921 - 2 7.1 7.9 91 1.6 10.4 1.9 2 0 0 2 2 2 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF1116 PF06545.11 ORF90217 - 9e-88 293.3 0.3 1.2e-87 292.9 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1116) CpcD PF01383.21 ORF90217 - 0.095 13.0 0.1 0.22 11.8 0.1 1.5 1 0 0 1 1 1 0 CpcD/allophycocyanin linker domain DUF1116 PF06545.11 ORF86666 - 9e-88 293.3 0.3 1.2e-87 292.9 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1116) CpcD PF01383.21 ORF86666 - 0.095 13.0 0.1 0.22 11.8 0.1 1.5 1 0 0 1 1 1 0 CpcD/allophycocyanin linker domain DUF2783 PF10932.8 ORF85858 - 0.027 14.2 0.2 0.14 11.9 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2783) Aminotran_3 PF00202.21 ORF82494 - 4.2e-25 88.2 0.0 5.6e-25 87.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III DUF166 PF02593.14 ORF82494 - 0.18 11.3 0.0 5 6.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function Yae1_N PF09811.9 ORF69948 - 0.2 11.4 0.2 0.36 10.6 0.2 1.4 1 0 0 1 1 1 0 Essential protein Yae1, N terminal GAS PF13851.6 ORF64768 - 1.6e-49 168.0 35.0 1.6e-49 168.0 35.0 3.3 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding PspA_IM30 PF04012.12 ORF64768 - 0.27 10.8 44.5 0.93 9.0 23.3 3.7 2 1 1 3 3 3 0 PspA/IM30 family Xrn1_D3 PF18194.1 ORF64768 - 0.32 11.1 4.7 7.6 6.7 1.4 3.1 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 CENP-F_leu_zip PF10473.9 ORF64768 - 0.5 10.4 72.7 0.037 14.0 12.1 4.7 2 1 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AhpC-TSA PF00578.21 ORF64768 - 0.96 9.4 11.1 0.079 12.9 0.8 3.3 3 1 0 3 3 3 0 AhpC/TSA family DUF5082 PF16888.5 ORF64768 - 2.4 8.5 59.7 0.087 13.1 9.1 5.5 2 2 4 6 6 6 0 Domain of unknown function (DUF5082) DUF4041 PF13250.6 ORF64768 - 6.2 6.8 17.5 2.1 8.3 0.0 5.0 5 0 0 5 5 5 0 Domain of unknown function (DUF4041) GAS PF13851.6 ORF49741 - 1.6e-49 168.0 35.0 1.6e-49 168.0 35.0 3.3 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding PspA_IM30 PF04012.12 ORF49741 - 0.27 10.8 44.5 0.93 9.0 23.3 3.7 2 1 1 3 3 3 0 PspA/IM30 family Xrn1_D3 PF18194.1 ORF49741 - 0.32 11.1 4.7 7.6 6.7 1.4 3.1 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 CENP-F_leu_zip PF10473.9 ORF49741 - 0.5 10.4 72.7 0.037 14.0 12.1 4.7 2 1 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AhpC-TSA PF00578.21 ORF49741 - 0.96 9.4 11.1 0.079 12.9 0.8 3.3 3 1 0 3 3 3 0 AhpC/TSA family DUF5082 PF16888.5 ORF49741 - 2.4 8.5 59.7 0.087 13.1 9.1 5.5 2 2 4 6 6 6 0 Domain of unknown function (DUF5082) DUF4041 PF13250.6 ORF49741 - 6.2 6.8 17.5 2.1 8.3 0.0 5.0 5 0 0 5 5 5 0 Domain of unknown function (DUF4041) DUF459 PF04311.13 ORF40889 - 0.3 10.1 0.6 0.7 8.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF459) Sugar_tr PF00083.24 ORF39892 - 8.9e-133 443.4 31.7 1e-132 443.3 31.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF39892 - 1.1e-39 136.4 54.4 1.5e-36 126.0 32.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 ORF39892 - 1.3e-09 37.1 6.2 1.3e-09 37.1 6.2 1.8 2 1 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 ORF39892 - 0.0023 16.6 16.7 0.0023 16.6 16.7 3.7 2 1 1 3 3 3 1 MFS/sugar transport protein TMEM43 PF07787.12 ORF38513 - 4.6e-25 88.4 0.0 7.3e-25 87.8 0.0 1.3 1 0 0 1 1 1 1 Transmembrane protein 43 ABC_export PF16962.5 ORF38513 - 0.51 8.7 6.1 0.77 8.1 6.1 1.2 1 0 0 1 1 1 0 Putative ABC exporter DUF4131 PF13567.6 ORF38513 - 1.3 8.7 3.5 2.6 7.7 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) GAS PF13851.6 ORF37181 - 1.6e-49 168.0 35.0 1.6e-49 168.0 35.0 3.3 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding PspA_IM30 PF04012.12 ORF37181 - 0.27 10.8 44.5 0.93 9.0 23.3 3.7 2 1 1 3 3 3 0 PspA/IM30 family Xrn1_D3 PF18194.1 ORF37181 - 0.32 11.1 4.7 7.6 6.7 1.4 3.1 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 CENP-F_leu_zip PF10473.9 ORF37181 - 0.5 10.4 72.7 0.037 14.0 12.1 4.7 2 1 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AhpC-TSA PF00578.21 ORF37181 - 0.96 9.4 11.1 0.079 12.9 0.8 3.3 3 1 0 3 3 3 0 AhpC/TSA family DUF5082 PF16888.5 ORF37181 - 2.4 8.5 59.7 0.087 13.1 9.1 5.5 2 2 4 6 6 6 0 Domain of unknown function (DUF5082) DUF4041 PF13250.6 ORF37181 - 6.2 6.8 17.5 2.1 8.3 0.0 5.0 5 0 0 5 5 5 0 Domain of unknown function (DUF4041) DUF1104 PF06518.11 ORF29051 - 0.013 15.8 0.2 0.028 14.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) UAA PF08449.11 ORF109487 - 1.1e-10 41.2 0.4 1.9e-10 40.4 0.4 1.4 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF109487 - 1.2e-05 25.5 2.5 1.2e-05 25.5 2.5 3.6 4 1 1 5 5 5 2 EamA-like transporter family PUNUT PF16913.5 ORF109487 - 2.3e-05 23.8 3.2 6.3e-05 22.3 0.7 2.5 3 0 0 3 3 3 1 Purine nucleobase transmembrane transport TPT PF03151.16 ORF109487 - 0.00076 18.9 7.9 0.0017 17.8 1.4 3.0 3 0 0 3 3 3 1 Triose-phosphate Transporter family Nuc_sug_transp PF04142.15 ORF109487 - 0.0015 17.8 0.1 0.0015 17.8 0.1 1.5 2 0 0 2 2 2 1 Nucleotide-sugar transporter Gp-FAR-1 PF05823.12 ORF109487 - 0.077 13.3 0.9 0.15 12.4 0.9 1.3 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) TRP PF06011.12 ORF108799 - 1.8e-05 23.7 23.2 9.3e-05 21.3 9.2 3.0 2 1 1 3 3 3 3 Transient receptor potential (TRP) ion channel PDR_assoc PF08370.11 ORF108799 - 0.12 12.1 2.4 0.18 11.5 0.5 2.3 2 0 0 2 2 2 0 Plant PDR ABC transporter associated GAS PF13851.6 ORF105036 - 1.6e-49 168.0 35.0 1.6e-49 168.0 35.0 3.3 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding PspA_IM30 PF04012.12 ORF105036 - 0.27 10.8 44.5 0.93 9.0 23.3 3.7 2 1 1 3 3 3 0 PspA/IM30 family Xrn1_D3 PF18194.1 ORF105036 - 0.32 11.1 4.7 7.6 6.7 1.4 3.1 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 CENP-F_leu_zip PF10473.9 ORF105036 - 0.5 10.4 72.7 0.037 14.0 12.1 4.7 2 1 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AhpC-TSA PF00578.21 ORF105036 - 0.96 9.4 11.1 0.079 12.9 0.8 3.3 3 1 0 3 3 3 0 AhpC/TSA family DUF5082 PF16888.5 ORF105036 - 2.4 8.5 59.7 0.087 13.1 9.1 5.5 2 2 4 6 6 6 0 Domain of unknown function (DUF5082) DUF4041 PF13250.6 ORF105036 - 6.2 6.8 17.5 2.1 8.3 0.0 5.0 5 0 0 5 5 5 0 Domain of unknown function (DUF4041) CRAL_TRIO PF00650.20 ORF104882 - 3.6e-28 98.3 0.0 6.7e-28 97.4 0.0 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF104882 - 4.1e-05 23.7 0.3 8.9e-05 22.6 0.3 1.6 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain DUF1104 PF06518.11 ORF10150 - 0.013 15.8 0.2 0.028 14.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) Pkinase PF00069.25 ORF100510 - 3.6e-79 265.8 1.6 4.2e-79 265.6 0.5 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100510 - 3.1e-41 141.4 0.1 4.2e-41 141.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF100510 - 6.8e-28 94.1 8.9 1.5e-06 27.3 0.0 4.9 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF100510 - 7.8e-27 93.5 10.3 1.1e-13 51.4 0.8 3.5 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF100510 - 1e-22 79.7 12.6 2.9e-08 33.4 1.0 4.8 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF100510 - 1.8e-22 77.3 9.1 4.9e-07 29.2 0.1 4.9 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF100510 - 8e-20 69.4 16.1 4.4e-06 25.9 0.1 5.0 5 0 0 5 5 5 4 EF hand EF-hand_4 PF12763.7 ORF100510 - 1.8e-08 34.3 10.8 3.1e-05 23.9 0.4 4.0 3 1 1 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF100510 - 5e-08 33.3 0.7 0.0028 18.0 0.2 2.7 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF100510 - 0.00036 20.8 0.4 0.0014 18.9 0.1 2.2 2 0 0 2 2 2 1 EF-hand domain Kdo PF06293.14 ORF100510 - 0.00046 19.6 0.2 0.00079 18.8 0.2 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF100510 - 0.0034 16.7 0.0 0.0084 15.5 0.0 1.7 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF100510 - 0.015 15.2 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Phage_TAC_12 PF12363.8 ORF100510 - 0.057 13.8 2.1 0.23 11.9 0.3 2.8 2 1 1 3 3 3 0 Phage tail assembly chaperone protein, TAC Dockerin_1 PF00404.18 ORF100510 - 0.092 12.9 2.4 26 5.1 0.0 4.0 3 1 0 3 3 3 0 Dockerin type I domain YrbL-PhoP_reg PF10707.9 ORF100510 - 0.12 11.8 1.8 0.7 9.4 0.1 2.3 1 1 1 2 2 2 0 PhoP regulatory network protein YrbL Toprim_2 PF13155.6 ORF100510 - 0.14 12.6 2.5 25 5.4 0.0 3.9 2 1 2 4 4 4 0 Toprim-like Sugar_tr PF00083.24 NODE_9291_length_1416_cov_11257.337437_g6818_i0reverse_frame_2 - 5.4e-11 42.0 9.5 1.4e-10 40.6 9.5 1.5 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_9291_length_1416_cov_11257.337437_g6818_i0reverse_frame_2 - 1.1e-07 31.1 12.1 2.7e-05 23.3 16.6 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 NODE_9291_length_1416_cov_11257.337437_g6818_i0reverse_frame_2 - 6.8e-05 21.6 15.0 0.018 13.6 6.0 2.5 2 0 0 2 2 2 2 MFS/sugar transport protein DnaB_2 PF07261.11 NODE_9291_length_1416_cov_11257.337437_g6818_i0reverse_frame_2 - 0.037 13.8 1.0 0.33 10.7 0.1 2.5 2 0 0 2 2 2 0 Replication initiation and membrane attachment PSII PF00421.19 ORF80886 - 1.3e-147 492.6 7.8 1.4e-147 492.4 7.8 1.0 1 0 0 1 1 1 1 Photosystem II protein DnaB_C PF03796.15 ORF75333 - 7.3e-112 372.8 0.2 9.9e-112 372.4 0.2 1.2 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain DnaB PF00772.21 ORF75333 - 1.5e-37 127.8 0.0 3.4e-37 126.7 0.0 1.6 1 0 0 1 1 1 1 DnaB-like helicase N terminal domain AAA_25 PF13481.6 ORF75333 - 2e-09 37.3 0.0 3.7e-09 36.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF75333 - 0.0012 19.0 0.1 0.011 15.9 0.1 2.4 1 1 0 1 1 1 1 AAA domain ATPase PF06745.13 ORF75333 - 0.0015 18.0 0.0 0.0039 16.6 0.0 1.7 1 0 0 1 1 1 1 KaiC AAA_22 PF13401.6 ORF75333 - 0.099 12.9 0.0 0.25 11.6 0.0 1.7 1 1 0 1 1 1 0 AAA domain Glyco_transf_54 PF04666.13 ORF73781 - 1.3e-59 201.5 0.1 1.8e-59 201.0 0.1 1.1 1 0 0 1 1 1 1 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region WES_acyltransf PF03007.16 ORF71584 - 1.9e-06 27.9 0.0 4.1e-06 26.8 0.0 1.5 2 0 0 2 2 2 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF71584 - 0.00099 19.1 0.0 0.0021 18.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Translin PF01997.16 ORF71584 - 0.014 15.4 0.2 0.025 14.6 0.2 1.4 1 0 0 1 1 1 0 Translin family Pox_J1 PF03338.15 ORF71584 - 0.14 12.0 2.5 0.3 10.9 0.5 2.6 4 0 0 4 4 4 0 Poxvirus J1 protein DUF2547 PF10818.8 ORF71584 - 0.15 13.0 0.0 0.37 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) DUF21 PF01595.20 ORF71479 - 3.1e-26 92.2 0.6 5.1e-26 91.4 0.6 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain YrhC PF14143.6 ORF71479 - 0.019 15.0 2.5 0.043 13.9 2.5 1.5 1 0 0 1 1 1 0 YrhC-like protein CBS PF00571.28 ORF71479 - 0.087 13.3 0.4 20 5.7 0.1 3.1 2 1 0 2 2 2 0 CBS domain ABC2_membrane PF01061.24 ORF71479 - 1.6 8.1 6.7 2.4 7.5 6.7 1.2 1 0 0 1 1 1 0 ABC-2 type transporter Pkinase PF00069.25 ORF61943 - 3.6e-27 95.4 0.2 5.7e-27 94.7 0.2 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF61943 - 4.3e-16 59.0 0.0 5.7e-16 58.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF61943 - 5.5e-08 32.0 1.1 6.5e-08 31.8 0.1 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF61943 - 5.1e-06 26.6 0.0 0.00011 22.2 0.0 2.1 1 1 0 2 2 2 1 Phosphotransferase enzyme family ODV-E18 PF10717.9 ORF61943 - 0.0083 16.0 1.0 0.019 14.8 1.0 1.5 1 0 0 1 1 1 1 Occlusion-derived virus envelope protein ODV-E18 HAUS6_N PF14661.6 ORF51915 - 0.1 12.1 8.2 0.08 12.5 5.4 2.0 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus TMF_DNA_bd PF12329.8 ORF51915 - 0.16 12.0 6.3 1.3 9.1 1.1 3.5 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Use1 PF09753.9 ORF51915 - 1.4 8.6 12.0 0.095 12.4 5.2 2.1 2 0 0 2 2 2 0 Membrane fusion protein Use1 DUF1664 PF07889.12 ORF51915 - 4.1 7.5 7.5 20 5.2 2.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) MGDG_synth PF06925.11 ORF45859 - 1e-27 97.3 0.1 1.5e-27 96.8 0.1 1.3 1 0 0 1 1 1 1 Monogalactosyldiacylglycerol (MGDG) synthase Glyco_tran_28_C PF04101.16 ORF45859 - 8.2e-14 51.9 1.8 1.4e-13 51.2 0.1 2.2 3 0 0 3 3 3 1 Glycosyltransferase family 28 C-terminal domain Glycos_transf_1 PF00534.20 ORF45859 - 9e-07 28.6 0.0 2.4e-06 27.2 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF45859 - 1.6e-06 28.6 0.1 3.8e-06 27.4 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 ORF45859 - 0.0014 17.6 0.0 0.07 12.0 0.0 2.4 2 1 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_4 PF13439.6 ORF45859 - 0.0034 17.4 1.8 0.017 15.2 0.9 2.7 3 1 0 3 3 3 1 Glycosyltransferase Family 4 DUF2325 PF10087.9 ORF45859 - 0.15 12.2 1.0 62 3.8 0.1 3.5 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2325) TPH PF13868.6 ORF43946 - 2.4e-24 85.5 132.1 2.4e-24 85.5 132.1 2.0 2 0 0 2 2 2 1 Trichohyalin-plectin-homology domain DUF2203 PF09969.9 ORF23250 - 0.016 15.9 1.5 0.08 13.7 0.0 2.6 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) ANAPC4 PF12896.7 ORF23250 - 0.052 13.0 0.0 0.26 10.7 0.0 2.0 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 4 Integrase_Zn PF02022.19 ORF23250 - 0.055 13.4 0.3 0.13 12.2 0.1 1.8 2 0 0 2 2 2 0 Integrase Zinc binding domain DUF948 PF06103.11 ORF23250 - 0.16 12.3 0.4 1.2 9.4 0.1 2.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Ca_chan_IQ PF08763.11 ORF23250 - 0.17 12.1 0.2 0.52 10.6 0.2 1.9 1 1 0 1 1 1 0 Voltage gated calcium channel IQ domain Apolipoprotein PF01442.18 ORF106111 - 0.021 14.7 0.1 0.089 12.7 0.3 1.8 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain Sec2p PF06428.11 ORF106111 - 0.038 14.0 1.2 0.097 12.6 1.2 1.6 1 0 0 1 1 1 0 GDP/GTP exchange factor Sec2p FAM76 PF16046.5 ORF106111 - 0.12 11.7 0.1 0.18 11.1 0.1 1.2 1 0 0 1 1 1 0 FAM76 protein RP-C_C PF11800.8 ORF106111 - 0.13 12.3 0.1 0.21 11.6 0.1 1.2 1 0 0 1 1 1 0 Replication protein C C-terminal region XLF PF09302.11 ORF106111 - 0.61 10.2 2.6 11 6.2 0.1 2.3 2 0 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Peptidase_C2 PF00648.21 ORF102789 - 2.6e-26 92.3 0.1 4.3e-26 91.6 0.1 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease EF-hand_6 PF13405.6 ORF102789 - 0.00052 19.7 0.9 0.033 14.1 0.0 3.5 3 0 0 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 ORF102789 - 0.0015 17.9 0.0 0.0055 16.1 0.0 2.0 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF102789 - 0.0033 16.8 0.2 0.023 14.2 0.0 2.6 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF102789 - 0.02 15.3 2.6 0.19 12.2 0.2 2.8 2 1 0 2 2 2 0 EF-hand domain pair Calpain_III PF01067.22 ORF102789 - 0.13 12.5 0.0 0.26 11.6 0.0 1.5 1 0 0 1 1 1 0 Calpain large subunit, domain III UQ_con PF00179.26 ORF101676 - 1e-25 90.0 0.0 2.3e-25 88.9 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 ORF101676 - 0.0075 16.1 0.0 0.016 15.1 0.0 1.5 1 0 0 1 1 1 1 UEV domain IL7 PF01415.16 ORF101676 - 0.08 13.0 2.8 0.12 12.4 0.0 2.4 3 0 0 3 3 3 0 Interleukin 7/9 family ABC_membrane PF00664.23 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 1e-39 136.9 7.6 1.3e-39 136.6 7.6 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 2.3e-31 109.2 0.0 4.3e-31 108.3 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.0046 17.4 0.1 0.014 15.8 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain T2SSE PF00437.20 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.0047 16.0 0.0 0.0091 15.1 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein SMC_N PF02463.19 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.0089 15.5 0.4 0.56 9.6 0.4 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.01 16.1 0.3 0.055 13.7 0.3 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.014 15.1 0.1 0.034 13.9 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.015 15.2 0.0 0.027 14.4 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_23 PF13476.6 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.017 15.6 0.0 0.029 14.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.026 14.1 0.5 0.15 11.6 0.5 2.1 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.044 13.9 0.0 0.091 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.049 13.7 0.2 0.087 12.9 0.2 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain MMR_HSR1 PF01926.23 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.076 13.1 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase NB-ARC PF00931.22 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.11 11.7 0.0 0.21 10.7 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain Mg_chelatase PF01078.21 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.13 11.6 0.0 0.41 10.0 0.0 1.8 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI YbhQ PF11076.8 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.16 12.0 4.1 0.2 11.6 2.1 2.2 1 1 1 2 2 2 0 Putative inner membrane protein YbhQ Zeta_toxin PF06414.12 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 0.19 11.0 0.0 0.35 10.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin DUF1673 PF07895.11 NODE_9426_length_1408_cov_4.123816_g6916_i0reverse_frame_1 - 6.1 6.5 5.7 0.66 9.7 1.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1673) AA_permease PF00324.21 ORF93151 - 2.5e-124 415.5 45.2 2.8e-124 415.3 45.2 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF93151 - 5.1e-50 170.5 49.4 6.6e-50 170.2 49.4 1.0 1 0 0 1 1 1 1 Amino acid permease Pkinase PF00069.25 ORF87766 - 1.4e-50 172.1 0.0 1.8e-50 171.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF87766 - 2e-33 115.8 0.0 3e-33 115.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF87766 - 6.5e-06 25.7 0.0 1.3e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF87766 - 0.018 15.0 0.3 0.5 10.3 0.0 2.4 2 0 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF87766 - 0.027 13.3 0.0 0.039 12.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase DNA_pol_B PF00136.21 ORF86701 - 7.4e-45 153.5 0.0 8.8e-44 149.9 0.0 2.1 1 1 0 1 1 1 1 DNA polymerase family B DNA_pol_B_2 PF03175.13 ORF86701 - 1.5e-05 24.0 0.0 0.0024 16.8 0.0 2.1 2 0 0 2 2 2 2 DNA polymerase type B, organellar and viral Chloroa_b-bind PF00504.21 ORF85695 - 1.9e-52 178.0 5.5 6.4e-32 111.3 0.2 2.5 3 0 0 3 3 3 2 Chlorophyll A-B binding protein Armet PF10208.9 ORF80959 - 6.6e-08 32.6 0.0 1.6e-07 31.3 0.0 1.6 1 0 0 1 1 1 1 Degradation arginine-rich protein for mis-folding SAP PF02037.27 ORF80959 - 0.057 13.2 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 SAP domain DUF4816 PF16086.5 ORF79561 - 0.023 14.6 1.6 0.023 14.6 1.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4816) LpxK PF02606.14 ORF67445 - 0.069 12.2 0.3 0.11 11.5 0.3 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase Pkinase PF00069.25 ORF6143 - 5.1e-37 127.7 0.0 7.9e-37 127.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6143 - 4.9e-13 49.0 0.0 7.6e-13 48.3 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF6143 - 4.3e-11 43.1 2.7 1.2e-10 41.7 2.7 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF6143 - 7e-11 40.9 5.7 0.00014 21.2 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF6143 - 1.6e-10 40.0 2.5 0.00022 20.9 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF6143 - 9.6e-08 31.8 5.9 0.0018 18.1 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF6143 - 3.3e-07 29.5 0.6 0.0088 15.5 0.1 3.0 2 0 0 2 2 2 2 EF hand Pkinase_fungal PF17667.1 ORF6143 - 0.022 13.5 0.0 0.035 12.9 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase SPARC_Ca_bdg PF10591.9 ORF6143 - 0.029 14.7 0.3 0.071 13.4 0.3 1.7 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region LRR_6 PF13516.6 ORF6015 - 0.00066 19.5 2.5 40 4.6 0.1 6.0 5 1 0 5 5 5 1 Leucine Rich repeat LRR_8 PF13855.6 ORF6015 - 0.23 11.3 3.5 4.3 7.2 0.3 3.5 3 1 0 3 3 3 0 Leucine rich repeat ENTH PF01417.20 ORF51627 - 5.9e-29 100.6 0.1 1.3e-28 99.5 0.0 1.6 2 0 0 2 2 2 1 ENTH domain ANTH PF07651.16 ORF51627 - 0.01 14.9 0.0 0.015 14.3 0.0 1.2 1 0 0 1 1 1 1 ANTH domain MGDG_synth PF06925.11 ORF47544 - 1e-27 97.3 0.1 1.5e-27 96.8 0.1 1.3 1 0 0 1 1 1 1 Monogalactosyldiacylglycerol (MGDG) synthase Glyco_tran_28_C PF04101.16 ORF47544 - 1.3e-13 51.3 2.2 1.4e-13 51.2 0.1 2.1 3 0 0 3 3 3 1 Glycosyltransferase family 28 C-terminal domain Glycos_transf_1 PF00534.20 ORF47544 - 9e-07 28.6 0.0 2.4e-06 27.2 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF47544 - 1.6e-06 28.6 0.1 3.8e-06 27.4 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 ORF47544 - 0.0014 17.6 0.0 0.07 12.0 0.0 2.4 2 1 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_4 PF13439.6 ORF47544 - 0.0034 17.4 1.8 0.017 15.2 0.9 2.7 3 1 0 3 3 3 1 Glycosyltransferase Family 4 DUF2325 PF10087.9 ORF47544 - 0.15 12.2 1.0 62 3.8 0.1 3.5 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2325) WES_acyltransf PF03007.16 ORF447 - 5.5e-11 42.7 0.0 8.6e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF447 - 3.3e-08 33.6 0.1 6.2e-08 32.7 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Condensation PF00668.20 ORF447 - 0.018 13.7 0.0 0.04 12.6 0.0 1.5 1 0 0 1 1 1 0 Condensation domain MGDG_synth PF06925.11 ORF4128 - 1e-27 97.3 0.1 1.5e-27 96.8 0.1 1.3 1 0 0 1 1 1 1 Monogalactosyldiacylglycerol (MGDG) synthase Glyco_tran_28_C PF04101.16 ORF4128 - 1.3e-13 51.3 2.2 1.4e-13 51.2 0.1 2.1 3 0 0 3 3 3 1 Glycosyltransferase family 28 C-terminal domain Glycos_transf_1 PF00534.20 ORF4128 - 9e-07 28.6 0.0 2.4e-06 27.2 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF4128 - 1.6e-06 28.6 0.1 3.8e-06 27.4 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 ORF4128 - 0.0014 17.6 0.0 0.07 12.0 0.0 2.4 2 1 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_4 PF13439.6 ORF4128 - 0.0034 17.4 1.8 0.017 15.2 0.9 2.7 3 1 0 3 3 3 1 Glycosyltransferase Family 4 DUF2325 PF10087.9 ORF4128 - 0.15 12.2 1.0 62 3.8 0.1 3.5 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2325) zf-CCCH PF00642.24 ORF30121 - 4.8e-13 48.7 7.6 2.2e-06 27.4 1.5 2.4 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF30121 - 8.4e-09 35.2 15.1 6e-05 23.0 6.1 3.1 2 1 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF30121 - 2.7e-07 30.2 8.6 0.0015 18.3 0.8 2.4 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF30121 - 0.00026 21.7 1.3 0.00026 21.7 1.3 4.5 3 1 2 5 5 5 2 Torus domain zf-CCCH_3 PF15663.5 ORF30121 - 0.047 13.9 10.9 0.035 14.3 5.6 3.1 2 2 1 3 3 3 0 Zinc-finger containing family EnY2 PF10163.9 ORF30121 - 0.078 13.4 2.9 4.3 7.8 0.2 3.1 2 1 0 2 2 2 0 Transcription factor e(y)2 zf-C3H1 PF10650.9 ORF30121 - 0.11 12.3 8.8 0.48 10.2 0.5 2.7 2 1 0 2 2 2 0 Putative zinc-finger domain zf-CCCH_2 PF14608.6 ORF30121 - 4.2 8.0 12.2 0.29 11.7 3.0 2.7 2 1 0 2 2 2 0 RNA-binding, Nab2-type zinc finger DUF3819 PF12842.7 ORF30121 - 4.6 7.2 14.2 0.15 12.0 6.4 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF3819) GED PF02212.18 ORF30121 - 6.3 7.0 9.2 12 6.2 0.2 3.2 1 1 2 3 3 3 0 Dynamin GTPase effector domain Glyco_hydro_38N PF01074.22 ORF24484 - 5.7e-38 130.9 0.2 1.1e-37 130.0 0.2 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF24484 - 7.7e-06 26.0 0.0 2.3e-05 24.5 0.0 1.8 2 0 0 2 2 2 1 Alpha mannosidase middle domain FUSC_2 PF13515.6 ORF14272 - 1.1 9.3 12.6 2.9 8.0 11.7 2.1 1 1 1 2 2 2 0 Fusaric acid resistance protein-like SpoIIP PF07454.11 ORF111485 - 0.016 14.7 0.2 0.016 14.7 0.2 2.2 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) Hormone_1 PF00103.20 ORF111485 - 0.13 12.0 2.1 0.27 11.0 2.1 1.5 1 0 0 1 1 1 0 Somatotropin hormone family BPL_N PF09825.9 ORF111485 - 0.15 11.1 1.3 0.23 10.5 1.3 1.3 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF1664 PF07889.12 ORF111485 - 1.2 9.2 5.6 0.81 9.7 2.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) eIF3_subunit PF08597.10 ORF111485 - 1.5 8.6 15.4 4.7 7.0 15.4 1.9 1 1 0 1 1 1 0 Translation initiation factor eIF3 subunit Cu-oxidase_3 PF07732.15 ORF108273 - 1.2e-27 96.3 0.4 5.4e-27 94.2 0.1 2.2 2 1 0 2 2 2 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 ORF108273 - 2.8e-13 49.8 0.0 5.9e-13 48.7 0.0 1.5 1 0 0 1 1 1 1 Multicopper oxidase Cu-oxidase PF00394.22 ORF108273 - 0.00015 22.0 0.0 0.00038 20.6 0.0 1.7 2 0 0 2 2 2 1 Multicopper oxidase TAT_signal PF10518.9 ORF108273 - 0.089 12.7 1.0 0.28 11.1 1.0 1.9 1 1 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence DUF3915 PF13054.6 NODE_9426_length_1408_cov_4.123816_g6916_i0forward_frame_2 - 4.9 7.2 0.0 4.9 7.2 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3915) T6SS_VasE PF05936.12 ORF68175 - 0.049 12.3 0.1 0.087 11.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE Pkinase PF00069.25 ORF63145 - 0.00013 21.5 1.0 0.0035 16.8 0.0 2.7 2 1 0 2 2 2 1 Protein kinase domain STN1_2 PF09170.10 ORF63145 - 0.13 12.5 0.2 0.28 11.4 0.2 1.5 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 APH PF01636.23 ORF63145 - 0.24 11.3 0.0 0.24 11.3 0.0 1.8 2 0 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 ORF63145 - 0.35 10.1 4.0 0.65 9.2 0.0 2.6 3 0 0 3 3 3 0 Protein tyrosine kinase Tcp10_C PF07202.13 ORF55729 - 0.01 15.8 0.8 0.023 14.6 0.8 1.5 1 0 0 1 1 1 0 T-complex protein 10 C-terminus Pneumovirus_M2 PF06436.11 ORF55729 - 2.4 7.6 9.3 1.6 8.2 0.3 2.4 1 1 1 2 2 2 0 Pneumovirus matrix protein 2 (M2) Peptidase_M16_M PF16187.5 ORF53829 - 6.6e-26 91.2 0.0 1.2e-25 90.4 0.0 1.3 1 0 0 1 1 1 1 Middle or third domain of peptidase_M16 Peptidase_M16_C PF05193.21 ORF53829 - 2.5e-12 47.2 0.0 7.9e-12 45.6 0.0 1.8 2 0 0 2 2 2 1 Peptidase M16 inactive domain MFS_1 PF07690.16 ORF49219 - 1.4e-30 106.4 37.7 1.4e-30 106.4 37.7 2.1 2 0 0 2 2 2 2 Major Facilitator Superfamily Acatn PF13000.7 ORF49219 - 1.7e-12 46.7 9.3 2e-10 39.8 2.0 2.4 2 1 1 3 3 3 2 Acetyl-coenzyme A transporter 1 Pup PF05639.11 ORF37626 - 0.078 13.9 4.7 0.27 12.2 4.7 1.9 1 1 0 1 1 1 0 Pup-like protein DUF4407 PF14362.6 ORF37626 - 0.09 12.1 3.2 0.89 8.8 4.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) 3HCDH_N PF02737.18 ORF37626 - 1.9 8.3 7.0 4 7.3 7.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Gln-synt_C PF00120.24 ORF19533 - 2.2e-140 467.6 0.0 2.6e-140 467.3 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 ORF19533 - 3.6e-32 110.0 0.1 7.4e-32 108.9 0.1 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain YkyA PF10368.9 ORF104124 - 0.1 12.3 0.7 30 4.2 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein PMEI PF04043.15 ORF104124 - 0.22 11.9 0.0 1.8 8.9 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Glycos_trans_3N PF02885.17 ORF104124 - 0.26 11.1 1.9 1.4 8.8 0.3 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain Na_Ca_ex PF01699.24 ORF88160 - 1.5e-18 67.2 16.4 1.5e-18 67.2 16.4 2.1 2 0 0 2 2 2 1 Sodium/calcium exchanger protein TIP49 PF06068.13 ORF85426 - 1e-159 531.5 1.8 1e-159 531.5 1.8 1.5 2 0 0 2 2 2 1 TIP49 P-loop domain TIP49_C PF17856.1 ORF85426 - 2.4e-26 91.6 1.3 2.4e-26 91.6 1.3 1.9 2 0 0 2 2 1 1 TIP49 AAA-lid domain AAA PF00004.29 ORF85426 - 9.4e-09 35.8 5.8 2.5e-05 24.7 0.0 3.7 4 0 0 4 4 3 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF85426 - 3.1e-06 27.2 0.1 0.0012 18.8 0.0 2.8 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF85426 - 3.8e-06 26.7 0.9 0.0067 16.2 0.1 2.6 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain DnaB_C PF03796.15 ORF85426 - 5.8e-06 25.8 0.5 1.4e-05 24.6 0.5 1.6 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_22 PF13401.6 ORF85426 - 2.4e-05 24.6 0.3 0.048 13.9 0.0 2.6 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.6 ORF85426 - 2.5e-05 24.7 0.3 0.00038 20.9 0.3 2.3 1 1 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 ORF85426 - 0.00012 21.5 0.6 0.0076 15.6 0.3 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 ORF85426 - 0.00014 22.2 5.7 0.00047 20.5 2.6 2.6 2 1 0 2 2 1 1 AAA domain Sigma54_activat PF00158.26 ORF85426 - 0.00042 20.1 0.3 0.29 10.8 0.1 2.8 3 0 0 3 3 2 1 Sigma-54 interaction domain AAA_23 PF13476.6 ORF85426 - 0.003 18.1 0.7 0.0087 16.6 0.7 1.9 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF85426 - 0.0033 17.0 0.1 0.0093 15.6 0.1 1.7 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF85426 - 0.0051 16.6 0.8 0.27 10.9 0.2 2.4 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 ORF85426 - 0.0057 16.0 0.8 0.012 14.9 0.3 1.8 2 0 0 2 2 2 1 Zeta toxin NACHT PF05729.12 ORF85426 - 0.0066 16.4 0.0 0.018 15.0 0.0 1.8 2 0 0 2 2 2 1 NACHT domain DUF2075 PF09848.9 ORF85426 - 0.0075 15.5 0.0 0.018 14.3 0.0 1.7 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF85426 - 0.024 14.1 0.7 0.093 12.2 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_11 PF13086.6 ORF85426 - 0.025 14.4 0.3 0.067 13.0 0.3 1.9 1 1 0 1 1 1 0 AAA domain TFIID-31kDa PF02291.15 ORF85426 - 0.031 14.3 0.2 0.059 13.4 0.2 1.5 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit ResIII PF04851.15 ORF85426 - 0.037 14.0 0.4 2.4 8.1 0.1 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Parvo_NS1 PF01057.17 ORF85426 - 0.063 12.4 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_33 PF13671.6 ORF85426 - 0.099 12.8 0.0 0.2 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF85426 - 0.15 12.0 0.8 0.41 10.7 0.1 2.1 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 ORF85426 - 0.2 12.0 0.3 1 9.8 0.0 2.3 3 0 0 3 3 2 0 RNA helicase AAA_17 PF13207.6 ORF85426 - 0.44 11.0 4.7 0.42 11.0 0.7 2.9 3 1 0 3 3 3 0 AAA domain zf-IS66 PF13005.7 ORF85426 - 4 7.9 4.4 6.2 7.3 1.6 2.7 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 p450 PF00067.22 ORF7676 - 1.7e-57 195.2 0.0 2.5e-57 194.7 0.0 1.2 1 0 0 1 1 1 1 Cytochrome P450 DUF1152 PF06626.12 ORF55985 - 0.14 11.3 0.0 0.26 10.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1152) RRM_1 PF00076.22 ORF51021 - 1.6e-13 50.2 0.0 4e-13 49.0 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ion_trans PF00520.31 ORF40509 - 1.9e-22 79.7 22.0 2.8e-22 79.2 22.0 1.2 1 0 0 1 1 1 1 Ion transport protein E7R PF17467.2 ORF40509 - 0.051 13.7 0.2 0.16 12.1 0.2 1.9 1 0 0 1 1 1 0 Viral Protein E7 Na_Ca_ex PF01699.24 ORF30539 - 1.5e-18 67.2 16.4 1.5e-18 67.2 16.4 2.1 2 0 0 2 2 2 1 Sodium/calcium exchanger protein Helicase_C PF00271.31 ORF28537 - 1.4e-29 102.6 0.1 1.4e-28 99.5 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain GUCT PF08152.12 ORF28537 - 9e-23 80.4 0.0 3.6e-22 78.5 0.0 2.1 2 0 0 2 2 2 1 GUCT (NUC152) domain DEAD PF00270.29 ORF28537 - 2.3e-05 24.2 0.1 9.9e-05 22.2 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 ORF28537 - 0.00046 19.5 0.3 0.0022 17.3 0.3 2.1 1 1 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Rhabdo_matrix PF03397.14 ORF28537 - 0.012 15.3 0.0 0.047 13.4 0.0 1.9 1 1 0 1 1 1 0 Rhabdovirus matrix protein mTERF PF02536.14 ORF16393 - 0.047 12.6 0.0 0.14 11.1 0.0 1.7 2 0 0 2 2 2 0 mTERF Colipase-like PF15083.6 ORF112257 - 5 7.3 22.2 2.3 8.4 10.7 2.4 1 1 1 2 2 2 0 Colipase-like MFS_2 PF13347.6 ORF100151 - 1.7e-80 270.7 27.5 2e-80 270.5 27.5 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 ORF100151 - 4.9e-11 42.2 49.0 8.1e-10 38.2 27.6 2.8 1 1 2 3 3 3 3 Major Facilitator Superfamily FUSC PF04632.12 ORF87070 - 0.0035 16.0 3.2 0.0053 15.4 3.2 1.2 1 0 0 1 1 1 1 Fusaric acid resistance protein family DUF1198 PF06711.11 ORF87070 - 0.03 14.4 0.2 0.14 12.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1198) DUF2754 PF10953.8 ORF87070 - 0.066 13.5 1.4 0.21 11.9 1.4 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) FUSC_2 PF13515.6 ORF87070 - 0.13 12.4 7.0 0.35 11.0 7.0 1.8 1 0 0 1 1 1 0 Fusaric acid resistance protein-like ArAE_1 PF06081.11 ORF87070 - 0.88 9.7 5.0 13 5.9 5.9 2.4 1 1 0 1 1 1 0 Aromatic acid exporter family member 1 DUF4142 PF13628.6 ORF79108 - 0.25 11.6 2.8 1.1 9.5 0.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4142) HATPase_c PF02518.26 ORF62915 - 4.2e-21 75.5 0.0 1e-20 74.3 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 ORF62915 - 4.7e-16 58.9 0.8 8.4e-15 54.9 0.0 2.9 3 0 0 3 3 3 1 HAMP domain HisKA PF00512.25 ORF62915 - 1.5e-13 50.6 0.8 4.2e-13 49.1 0.1 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 ORF62915 - 0.16 11.9 0.0 0.35 10.8 0.0 1.5 1 0 0 1 1 1 0 GHKL domain betaPIX_CC PF16523.5 ORF62915 - 0.19 11.6 0.2 0.46 10.3 0.2 1.6 1 0 0 1 1 1 0 betaPIX coiled coil MORN PF02493.20 ORF2988 - 6.5e-08 32.0 10.1 0.00063 19.5 1.9 4.6 4 0 0 4 4 4 3 MORN repeat IF-2 PF11987.8 ORF13893 - 1.7e-21 76.3 0.2 5.8e-21 74.6 0.2 1.9 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 ORF13893 - 1.8e-13 50.2 0.2 4.4e-13 48.9 0.2 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 ORF13893 - 2.3e-12 47.1 2.8 3.2e-09 37.0 0.3 2.8 2 0 0 2 2 2 2 Elongation factor Tu domain 2 GTP_EFTU PF00009.27 ORF13893 - 0.0024 17.4 0.3 0.01 15.4 0.0 2.0 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain ThiC_Rad_SAM PF01964.18 ORF105563 - 1.1e-196 653.6 0.0 1.2e-196 653.5 0.0 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family Nuc_recep-AF1 PF11825.8 ORF105563 - 0.21 11.7 0.0 0.44 10.6 0.0 1.4 1 0 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 DUF3256 PF11644.8 ORF86624 - 0.032 13.7 0.0 0.074 12.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3256) SspB PF04386.13 ORF86624 - 0.098 12.5 2.6 0.26 11.2 2.6 1.7 1 0 0 1 1 1 0 Stringent starvation protein B Presenilin PF01080.17 ORF86624 - 9.8 4.8 8.2 16 4.1 8.2 1.3 1 0 0 1 1 1 0 Presenilin MFS_2 PF13347.6 ORF77589 - 5.4e-82 275.6 37.5 6.1e-82 275.4 37.5 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 ORF77589 - 3.6e-09 36.0 43.4 3.6e-09 36.0 43.4 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF2101 PF09874.9 ORF77589 - 3.8 7.2 10.1 0.84 9.3 6.1 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2101) ABC2_membrane_3 PF12698.7 ORF74451 - 1.7e-23 83.3 23.6 1.7e-23 83.3 23.6 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks18.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks18.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks18.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks18.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Glycoprotein PF03409.15 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_1 - 0.033 13.0 12.1 0.037 12.9 12.1 1.1 1 0 0 1 1 1 0 Transmembrane glycoprotein SSP160 PF06933.11 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_1 - 4.4 5.4 27.4 5.4 5.1 27.4 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 MGC-24 PF05283.11 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_1 - 6.4 7.2 14.2 8.5 6.8 14.2 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Shisa PF13908.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.048 13.9 3.2 0.067 13.4 3.2 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator TMEM154 PF15102.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.067 13.1 1.5 0.085 12.8 1.5 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF4349 PF14257.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.13 11.7 1.8 0.17 11.3 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF4577 PF15145.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.3 11.1 3.2 0.39 10.7 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Amnionless PF14828.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.81 8.4 4.6 0.98 8.2 4.6 1.1 1 0 0 1 1 1 0 Amnionless DUF3040 PF11239.8 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 1.2 9.4 13.3 1.6 9.0 13.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) GPW_gp25 PF04965.14 NODE_50395_length_365_cov_58.463636_g42495_i0forward_frame_1 - 0.063 13.0 0.1 0.089 12.6 0.1 1.2 1 0 0 1 1 1 0 Gene 25-like lysozyme RPEL PF02755.15 NODE_50393_length_365_cov_61.275758_g42493_i0forward_frame_1 - 0.038 13.7 0.1 0.06 13.1 0.1 1.4 1 0 0 1 1 1 0 RPEL repeat DUF3925 PF13063.6 NODE_50381_length_365_cov_98.718182_g42481_i0forward_frame_1 - 0.39 11.0 4.6 0.53 10.5 0.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3925) Suppressor_APC PF11414.8 NODE_50378_length_365_cov_121.751515_g42478_i0reverse_frame_1 - 0.029 14.4 3.0 0.061 13.4 2.2 1.9 1 1 1 2 2 2 0 Adenomatous polyposis coli tumour suppressor protein H2O2_YaaD PF03883.14 NODE_50378_length_365_cov_121.751515_g42478_i0reverse_frame_1 - 0.031 13.8 0.5 0.095 12.2 0.0 1.7 1 1 1 2 2 2 0 Peroxide stress protein YaaA GAT PF03127.14 NODE_50378_length_365_cov_121.751515_g42478_i0reverse_frame_1 - 0.034 14.4 5.8 2.3 8.6 0.1 2.2 2 0 0 2 2 2 0 GAT domain DUF2383 PF09537.10 NODE_50378_length_365_cov_121.751515_g42478_i0reverse_frame_1 - 0.061 13.7 1.9 3.6 8.0 0.2 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF2383) DUF2087 PF09860.9 NODE_50378_length_365_cov_121.751515_g42478_i0reverse_frame_1 - 0.092 12.9 2.2 16 5.7 0.9 2.8 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2087) NPV_P10 PF05531.12 NODE_50378_length_365_cov_121.751515_g42478_i0reverse_frame_1 - 0.18 12.2 2.1 7.8 7.0 2.1 2.4 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein GAD-like PF08887.11 NODE_50375_length_365_cov_130.400000_g42475_i0forward_frame_1 - 0.12 12.2 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 GAD-like domain Gon7 PF08738.10 NODE_50374_length_365_cov_136.487879_g42474_i0reverse_frame_1 - 0.028 14.5 0.1 0.028 14.5 0.1 2.3 2 1 0 2 2 2 0 Gon7 family HeLo PF14479.6 NODE_50374_length_365_cov_136.487879_g42474_i0reverse_frame_1 - 0.22 11.3 2.5 0.25 11.2 2.5 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation RNA_polI_A34 PF08208.11 NODE_50374_length_365_cov_136.487879_g42474_i0reverse_frame_1 - 6.3 6.8 27.1 7.2 6.6 27.1 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF4604 PF15377.6 NODE_50374_length_365_cov_136.487879_g42474_i0reverse_frame_1 - 7.6 6.9 27.5 9.6 6.6 27.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) Thiolase_C PF02803.18 NODE_50355_length_365_cov_3962.757576_g42457_i0reverse_frame_1 - 0.16 11.6 1.0 0.23 11.1 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain DUF1071 PF06378.11 NODE_50355_length_365_cov_3962.757576_g42457_i0forward_frame_1 - 0.12 11.9 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) MORN PF02493.20 NODE_50335_length_366_cov_3.274924_g42437_i0reverse_frame_1 - 0.00096 18.9 9.0 0.0016 18.2 0.1 4.2 5 0 0 5 5 5 1 MORN repeat IFT20 PF14931.6 NODE_50328_length_366_cov_32.649547_g42430_i0reverse_frame_1 - 2.4 8.3 9.1 0.38 10.9 3.0 2.5 2 1 1 3 3 3 0 Intraflagellar transport complex B, subunit 20 LMBR1 PF04791.16 NODE_50328_length_366_cov_32.649547_g42430_i0reverse_frame_1 - 2.5 6.9 4.3 2.7 6.8 4.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein MOSC PF03473.17 NODE_50326_length_366_cov_55.274924_g42428_i0reverse_frame_1 - 1.2e-05 25.3 0.0 1.6e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 MOSC domain Rotavirus_VP7 PF05868.11 NODE_50326_length_366_cov_55.274924_g42428_i0reverse_frame_1 - 0.034 13.5 0.1 0.049 13.0 0.1 1.2 1 0 0 1 1 1 0 Rotavirus major outer capsid protein VP7 TMEM141 PF15110.6 NODE_50320_length_366_cov_74.595166_g42422_i0reverse_frame_1 - 0.058 14.0 0.1 0.078 13.6 0.1 1.3 1 0 0 1 1 1 0 TMEM141 protein family Endonuc_Holl PF10107.9 NODE_50289_length_366_cov_294.099698_g42391_i0reverse_frame_1 - 2.8 7.8 11.1 0.73 9.7 8.0 1.6 1 1 1 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase KN17_SH3 PF18131.1 NODE_50288_length_366_cov_392.410876_g42390_i0reverse_frame_1 - 0.013 15.6 0.6 0.033 14.3 0.3 1.9 1 1 0 1 1 1 0 KN17 SH3-like C-terminal domain Hrs_helical PF12210.8 NODE_50288_length_366_cov_392.410876_g42390_i0reverse_frame_1 - 0.019 15.5 4.2 0.051 14.1 2.2 2.2 1 1 1 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate SATase_N PF06426.14 NODE_50288_length_366_cov_392.410876_g42390_i0reverse_frame_1 - 0.045 14.1 0.4 0.059 13.8 0.4 1.3 1 0 0 1 1 1 0 Serine acetyltransferase, N-terminal EFhand_Ca_insen PF08726.10 NODE_50288_length_366_cov_392.410876_g42390_i0reverse_frame_1 - 0.11 12.6 1.2 0.11 12.6 0.3 1.5 2 0 0 2 2 2 0 Ca2+ insensitive EF hand Thiolase_C PF02803.18 NODE_50285_length_366_cov_3950.830816_g42387_i0reverse_frame_1 - 0.16 11.7 1.0 0.23 11.1 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain AP3D1 PF06375.11 NODE_50282_length_366_cov_16469.746224_g42384_i0reverse_frame_1 - 6.7 6.9 12.6 8.4 6.6 12.6 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Phageshock_PspD PF09584.10 NODE_50281_length_367_cov_1.201807_g42383_i0reverse_frame_2 - 0.091 12.8 0.1 0.18 11.8 0.1 1.5 1 0 0 1 1 1 0 Phage shock protein PspD (Phageshock_PspD) ABC_tran PF00005.27 NODE_50279_length_367_cov_1.222892_g42381_i0forward_frame_3 - 4.2e-08 33.8 0.0 4.6e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 ABC transporter SPR1 PF15356.6 NODE_50275_length_367_cov_1.394578_g42377_i0reverse_frame_2 - 0.01 16.3 1.5 0.014 15.9 1.5 1.1 1 0 0 1 1 1 0 Psoriasis susceptibility locus 2 Nucleoside_tran PF01733.18 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_3 - 1.7e-13 50.7 5.2 2.1e-13 50.4 5.2 1.1 1 0 0 1 1 1 1 Nucleoside transporter Foamy_virus_ENV PF03408.14 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_3 - 0.41 8.4 2.3 0.49 8.2 2.3 1.0 1 0 0 1 1 1 0 Foamy virus envelope protein DUF2207 PF09972.9 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_3 - 0.48 9.1 5.3 0.74 8.5 5.3 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MFS_1 PF07690.16 NODE_50272_length_367_cov_1.680723_g42374_i0forward_frame_3 - 2.2e-07 30.1 0.1 2.5e-07 29.9 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Mob_synth_C PF06463.13 NODE_50271_length_367_cov_1.746988_g42373_i0forward_frame_2 - 0.073 13.0 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C Adhesin_Dr PF04619.12 NODE_50270_length_367_cov_1.765060_g42372_i0reverse_frame_3 - 0.0068 16.3 0.8 0.0089 16.0 0.8 1.1 1 0 0 1 1 1 1 Dr-family adhesin Spc7_N PF15402.6 NODE_50269_length_367_cov_1.786145_g42371_i0reverse_frame_3 - 3.8 5.6 11.4 4.4 5.4 11.4 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 ING PF12998.7 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.026 15.1 2.2 0.026 15.1 2.2 1.9 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding DUF745 PF05335.13 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.11 12.2 4.5 0.14 11.9 4.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF745) Peptidase_S66C PF17676.1 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.12 12.9 0.1 0.17 12.4 0.1 1.3 1 0 0 1 1 1 0 LD-carboxypeptidase C-terminal domain CSTF2_hinge PF14327.6 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.14 12.6 1.6 0.15 12.5 0.5 1.6 2 0 0 2 2 2 0 Hinge domain of cleavage stimulation factor subunit 2 PFEMP PF03011.15 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.79 10.4 8.2 1 10.0 8.2 1.1 1 0 0 1 1 1 0 PFEMP DBL domain DUF4844 PF16133.5 NODE_50263_length_367_cov_1.939759_g42365_i0reverse_frame_2 - 0.061 13.9 0.2 0.1 13.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4844) NB-ARC PF00931.22 NODE_50263_length_367_cov_1.939759_g42365_i0reverse_frame_2 - 0.087 12.0 0.0 0.098 11.8 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain OST-HTH PF12872.7 NODE_50263_length_367_cov_1.939759_g42365_i0reverse_frame_2 - 0.093 12.6 0.0 0.37 10.6 0.0 1.9 2 0 0 2 2 2 0 OST-HTH/LOTUS domain ACC_epsilon PF13822.6 NODE_50258_length_367_cov_2.222892_g42360_i0reverse_frame_2 - 0.032 14.9 1.1 0.065 13.9 1.1 1.4 1 0 0 1 1 1 0 Acyl-CoA carboxylase epsilon subunit RSN1_TM PF13967.6 NODE_50255_length_367_cov_2.379518_g42357_i0reverse_frame_3 - 2.7e-08 33.7 1.1 3.1e-08 33.5 1.1 1.1 1 0 0 1 1 1 1 Late exocytosis, associated with Golgi transport Kinesin PF00225.23 NODE_50253_length_367_cov_2.481928_g42355_i0reverse_frame_2 - 1.5e-30 106.3 0.1 1.9e-30 106.0 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain LRR_9 PF14580.6 NODE_50251_length_367_cov_2.768072_g42353_i0reverse_frame_2 - 0.016 14.7 0.1 0.019 14.5 0.1 1.1 1 0 0 1 1 1 0 Leucine-rich repeat DUF1732 PF08340.11 NODE_50248_length_367_cov_3.313253_g42350_i0forward_frame_2 - 0.11 12.5 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1732) Decorin_bind PF02352.15 NODE_50244_length_367_cov_19.355422_g42347_i0forward_frame_2 - 0.052 13.8 0.0 0.056 13.7 0.0 1.1 1 0 0 1 1 1 0 Decorin binding protein BRCT PF00533.26 NODE_50239_length_367_cov_47.472892_g42342_i0forward_frame_3 - 0.01 16.2 0.9 0.019 15.3 0.9 1.5 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain Papilloma_E5A PF05776.12 NODE_50238_length_367_cov_59.756024_g42341_i0reverse_frame_2 - 7.5 7.0 11.8 0.47 10.9 3.5 2.3 1 1 1 2 2 2 0 Papillomavirus E5A protein zf-RING_2 PF13639.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 1.7e-09 37.9 0.7 2.5e-09 37.3 0.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 5.7e-08 32.9 0.6 9.1e-08 32.3 0.6 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 9.2e-08 31.7 1.4 2.2e-07 30.5 1.4 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 3.8e-07 30.0 1.3 6.7e-07 29.2 1.3 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 2.3e-06 27.4 0.3 4.5e-06 26.4 0.3 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 2.4e-05 24.2 0.2 4e-05 23.5 0.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 2.4e-05 24.1 0.6 3.9e-05 23.4 0.6 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 3.7e-05 23.3 0.4 5.2e-05 22.8 0.4 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 8.3e-05 22.3 1.2 0.00015 21.5 1.2 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 0.00091 19.2 0.4 0.0012 18.8 0.4 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 0.0012 19.0 0.2 0.0023 18.1 0.2 1.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 0.0012 18.6 0.1 0.0019 18.0 0.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FAM76 PF16046.5 NODE_50237_length_367_cov_60.596386_g42340_i0forward_frame_3 - 0.36 10.2 8.6 0.4 10.0 8.6 1.0 1 0 0 1 1 1 0 FAM76 protein Dsh_C PF12316.8 NODE_50236_length_367_cov_63.623494_g42339_i0forward_frame_2 - 0.17 12.3 1.3 0.21 11.9 1.3 1.1 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal GCV_T_C PF08669.11 NODE_50232_length_367_cov_69.472892_g42335_i0reverse_frame_2 - 0.021 14.7 0.0 0.056 13.4 0.0 1.7 1 1 0 1 1 1 0 Glycine cleavage T-protein C-terminal barrel domain FR47 PF08445.10 NODE_50225_length_367_cov_83.177711_g42328_i0reverse_frame_2 - 0.016 15.2 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 FR47-like protein TEBP_beta PF07404.11 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 0.057 12.8 4.2 0.066 12.6 4.2 1.0 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) BUD22 PF09073.10 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 0.36 10.1 15.6 0.41 9.9 15.6 1.0 1 0 0 1 1 1 0 BUD22 Nop14 PF04147.12 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 4 5.5 13.3 4.6 5.3 13.3 1.0 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 4.2 5.5 9.8 5.1 5.3 9.8 1.0 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 6.6 6.5 10.7 8.5 6.1 10.7 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Ubiquitin_2 PF14560.6 NODE_50220_length_367_cov_91.394578_g42323_i0reverse_frame_2 - 0.04 14.4 0.8 0.075 13.5 0.1 1.8 2 0 0 2 2 2 0 Ubiquitin-like domain SCRG1 PF15224.6 NODE_50216_length_367_cov_94.900602_g42319_i0reverse_frame_2 - 0.027 14.6 0.0 0.043 13.9 0.0 1.3 1 0 0 1 1 1 0 Scrapie-responsive protein 1 IMUP PF15761.5 NODE_50216_length_367_cov_94.900602_g42319_i0forward_frame_3 - 5 7.9 11.4 0.33 11.6 5.8 1.8 2 0 0 2 2 2 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_50216_length_367_cov_94.900602_g42319_i0forward_frame_3 - 10 5.7 17.3 0.21 11.2 9.6 1.8 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein RNHCP PF12647.7 NODE_50213_length_367_cov_102.403614_g42316_i0reverse_frame_2 - 0.16 11.9 6.4 0.22 11.5 6.4 1.2 1 0 0 1 1 1 0 RNHCP domain SWIM PF04434.17 NODE_50211_length_367_cov_108.171687_g42314_i0reverse_frame_2 - 0.14 11.8 1.4 0.31 10.8 0.3 2.0 2 0 0 2 2 2 0 SWIM zinc finger RCC1_2 PF13540.6 NODE_50209_length_367_cov_117.900602_g42312_i0reverse_frame_3 - 0.016 15.0 0.1 0.031 14.1 0.1 1.5 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat SIS_2 PF13580.6 NODE_50209_length_367_cov_117.900602_g42312_i0reverse_frame_3 - 0.056 13.5 0.2 0.078 13.0 0.2 1.2 1 0 0 1 1 1 0 SIS domain PsaF PF17550.2 NODE_50205_length_367_cov_185.292169_g42308_i0forward_frame_3 - 1.1 8.8 3.8 1.5 8.3 3.8 1.2 1 0 0 1 1 1 0 Family of unknown function DUF2671 PF10877.8 NODE_50200_length_367_cov_3293.250000_g36700_i3reverse_frame_2 - 0.017 14.9 0.6 0.038 13.8 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) PDR_CDR PF06422.12 NODE_50200_length_367_cov_3293.250000_g36700_i3reverse_frame_2 - 9.2 6.2 9.0 56 3.7 9.0 1.9 1 1 0 1 1 1 0 CDR ABC transporter Pepdidase_M14_N PF18027.1 NODE_50196_length_368_cov_1.510511_g42302_i0forward_frame_2 - 0.0042 17.4 0.0 0.0075 16.6 0.0 1.4 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain DUF1391 PF07151.12 NODE_50194_length_368_cov_1.612613_g42300_i0reverse_frame_2 - 1.6e-12 47.0 5.5 1.6e-12 47.0 5.5 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1391) SieB PF14163.6 NODE_50194_length_368_cov_1.612613_g42300_i0forward_frame_3 - 2.1e-15 56.5 0.0 2.4e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Super-infection exclusion protein B Chitin_synth_1N PF08407.11 NODE_50194_length_368_cov_1.612613_g42300_i0forward_frame_3 - 0.0086 16.0 0.0 0.013 15.5 0.0 1.2 1 0 0 1 1 1 1 Chitin synthase N-terminal DUF809 PF05663.11 NODE_50193_length_368_cov_1.642643_g42299_i0forward_frame_2 - 0.51 10.5 4.2 0.13 12.4 0.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF809) PHZA_PHZB PF03284.13 NODE_50190_length_368_cov_1.921922_g42296_i0forward_frame_2 - 0.084 12.5 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Phenazine biosynthesis protein A/B AAA-ATPase_like PF09820.9 NODE_50187_length_368_cov_2.150150_g42293_i0reverse_frame_3 - 0.077 12.4 1.2 0.1 12.0 1.2 1.1 1 0 0 1 1 1 0 Predicted AAA-ATPase zf-RING_2 PF13639.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 7.4e-10 39.0 9.8 1e-09 38.5 9.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 4.3e-07 30.1 10.3 9.8e-07 29.0 10.3 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 6.2e-05 22.8 10.0 0.00012 21.9 10.0 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 9.5e-05 22.1 5.5 0.00019 21.1 5.5 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.00031 20.7 5.5 0.00071 19.6 5.5 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.0011 18.8 12.4 0.02 14.8 12.4 2.2 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.0016 18.2 7.4 0.0024 17.7 7.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.0073 16.5 8.7 0.021 15.0 8.7 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain Baculo_RING PF05883.11 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.031 14.3 1.2 0.049 13.6 1.2 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-Di19 PF05605.12 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.037 14.3 2.5 1.2 9.4 0.6 2.6 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding zf-RING_5 PF14634.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.087 12.8 8.3 0.17 11.8 8.4 1.5 1 1 0 1 1 1 0 zinc-RING finger domain RINGv PF12906.7 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.45 10.7 10.2 0.74 10.0 10.2 1.3 1 0 0 1 1 1 0 RING-variant domain zf-RING_UBOX PF13445.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.49 10.5 7.0 0.95 9.5 7.0 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_4 PF14570.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 2 8.2 8.5 1.7 8.5 0.8 2.6 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 3.2 8.0 8.7 1.2 9.4 1.0 2.4 1 1 0 2 2 2 0 zinc finger of C3HC4-type, RING BiPBP_C PF06832.12 NODE_50184_length_368_cov_2.405405_g42290_i0reverse_frame_3 - 5.9e-07 29.4 0.0 8.3e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 Penicillin-Binding Protein C-terminus Family DAGK_cat PF00781.24 NODE_50181_length_368_cov_2.687688_g42287_i0reverse_frame_2 - 0.22 11.2 0.3 0.31 10.7 0.3 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain DUF2632 PF10943.8 NODE_50181_length_368_cov_2.687688_g42287_i0forward_frame_3 - 0.03 13.9 5.9 0.037 13.6 5.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2632) ADH_zinc_N PF00107.26 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 2.9e-13 49.9 0.0 3.8e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 9.6e-07 28.3 0.0 1.2e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.00051 19.5 0.0 0.0006 19.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ETF PF01012.21 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.013 15.3 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 Electron transfer flavoprotein domain ADH_zinc_N_2 PF13602.6 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.017 16.2 0.0 0.025 15.6 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding dehydrogenase NAD_binding_2 PF03446.15 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.033 14.3 0.0 0.038 14.2 0.0 1.1 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_10 PF13460.6 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.09 12.7 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.092 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ThiF PF00899.21 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.79 9.0 2.9 1.1 8.6 1.8 1.7 1 1 1 2 2 2 0 ThiF family Hydrolase_4 PF12146.8 NODE_50178_length_368_cov_3.402402_g42284_i0reverse_frame_2 - 2.5e-24 85.9 0.0 2.7e-24 85.8 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DiS_P_DiS PF06750.13 NODE_50174_length_368_cov_4.156156_g42280_i0forward_frame_2 - 0.04 14.0 5.3 1.7 8.8 0.9 2.2 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain MOR2-PAG1_mid PF14228.6 NODE_50173_length_368_cov_4.324324_g42279_i0reverse_frame_2 - 0.063 10.9 0.2 0.08 10.6 0.2 1.0 1 0 0 1 1 1 0 Cell morphogenesis central region VATC PF18716.1 NODE_50172_length_368_cov_4.807808_g42278_i0reverse_frame_3 - 0.074 12.9 2.2 0.074 12.9 2.2 1.8 2 0 0 2 2 2 0 Vms1-associating treble clef domain Cullin_Nedd8 PF10557.9 NODE_50166_length_368_cov_59.207207_g42272_i0forward_frame_3 - 0.00048 20.1 1.3 0.42 10.7 0.1 2.3 2 1 0 2 2 2 2 Cullin protein neddylation domain SusD-like_3 PF14322.6 NODE_50166_length_368_cov_59.207207_g42272_i0forward_frame_2 - 0.05 13.9 0.0 0.056 13.8 0.0 1.1 1 0 0 1 1 1 0 Starch-binding associating with outer membrane Rsc14 PF08586.10 NODE_50165_length_368_cov_64.231231_g42271_i0reverse_frame_2 - 0.049 14.4 1.1 0.15 12.9 0.2 1.9 2 0 0 2 2 2 0 RSC complex, Rsc14/Ldb7 subunit FA_desaturase PF00487.24 NODE_50165_length_368_cov_64.231231_g42271_i0forward_frame_3 - 0.74 9.6 10.0 0.94 9.3 10.0 1.1 1 0 0 1 1 1 0 Fatty acid desaturase Herpes_LMP2 PF07415.11 NODE_50154_length_368_cov_80.684685_g42260_i0forward_frame_2 - 0.029 13.2 0.2 0.034 12.9 0.2 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein Methyltransf_34 PF11312.8 NODE_50152_length_368_cov_84.612613_g42258_i0reverse_frame_2 - 0.0048 16.2 2.0 0.0056 16.0 2.0 1.1 1 0 0 1 1 1 1 Putative SAM-dependent methyltransferase GNT-I PF03071.15 NODE_50152_length_368_cov_84.612613_g42258_i0reverse_frame_2 - 0.14 10.9 4.1 0.14 10.9 4.1 1.0 1 0 0 1 1 1 0 GNT-I family Mobilization_B PF17511.2 NODE_50152_length_368_cov_84.612613_g42258_i0reverse_frame_2 - 1.3 9.4 12.5 1.6 9.1 12.5 1.2 1 0 0 1 1 1 0 Mobilization protein B Dppa2_A PF14049.6 NODE_50151_length_368_cov_84.633634_g42257_i0forward_frame_2 - 0.12 12.6 0.3 0.12 12.6 0.3 1.7 2 0 0 2 2 2 0 Dppa2/4 conserved region in higher vertebrates SPATA3 PF15662.5 NODE_50149_length_368_cov_87.141141_g42255_i0reverse_frame_2 - 0.0052 17.4 0.5 0.0062 17.2 0.5 1.3 1 0 0 1 1 1 1 Spermatogenesis-associated protein 3 family SMC_N PF02463.19 NODE_50147_length_368_cov_89.528529_g42253_i0reverse_frame_3 - 0.01 15.3 0.4 0.014 14.8 0.4 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain PAN_1 PF00024.26 NODE_50145_length_368_cov_90.402402_g42251_i0forward_frame_3 - 0.014 15.4 0.8 0.02 14.9 0.8 1.4 1 0 0 1 1 1 0 PAN domain DUF1039 PF06287.11 NODE_50143_length_368_cov_108.366366_g42249_i0reverse_frame_3 - 0.033 14.6 0.1 0.13 12.7 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1039) HIGH_NTase1 PF05636.11 NODE_50143_length_368_cov_108.366366_g42249_i0reverse_frame_2 - 0.19 10.9 0.0 0.2 10.8 0.0 1.0 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase Evr1_Alr PF04777.13 NODE_50141_length_368_cov_136.039039_g42247_i0reverse_frame_3 - 0.00025 21.5 0.0 0.00034 21.0 0.0 1.3 1 0 0 1 1 1 1 Erv1 / Alr family Gal_Lectin PF02140.18 NODE_50141_length_368_cov_136.039039_g42247_i0forward_frame_3 - 0.066 13.6 0.4 0.11 12.9 0.0 1.5 2 0 0 2 2 2 0 Galactose binding lectin domain C4bp_oligo PF18453.1 NODE_50134_length_368_cov_279.912913_g42240_i0reverse_frame_3 - 0.017 15.3 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 Oligomerization domain of C4b-binding protein alpha Mobilization_B PF17511.2 NODE_50127_length_368_cov_6079.591592_g42233_i0reverse_frame_2 - 0.057 13.8 0.4 0.077 13.4 0.4 1.2 1 0 0 1 1 1 0 Mobilization protein B DHHA2 PF02833.14 NODE_50123_length_369_cov_1.233533_g42229_i0forward_frame_3 - 0.059 13.6 0.1 0.068 13.3 0.1 1.1 1 0 0 1 1 1 0 DHHA2 domain GAT PF03127.14 NODE_50123_length_369_cov_1.233533_g42229_i0forward_frame_2 - 0.023 15.0 0.3 0.049 13.9 0.0 1.7 2 0 0 2 2 2 0 GAT domain DUF2639 PF11121.8 NODE_50122_length_369_cov_1.251497_g42228_i0forward_frame_2 - 0.16 12.1 0.1 0.27 11.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2639) CPSF73-100_C PF11718.8 NODE_50121_length_369_cov_1.302395_g42227_i0forward_frame_3 - 2.2e-12 47.0 1.0 2.5e-12 46.8 1.0 1.0 1 0 0 1 1 1 1 Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term Mei4 PF13971.6 NODE_50120_length_369_cov_1.332335_g42226_i0forward_frame_2 - 0.014 14.9 0.7 0.017 14.6 0.7 1.0 1 0 0 1 1 1 0 Meiosis-specific protein Mei4 DUF1158 PF06643.11 NODE_50117_length_369_cov_1.461078_g42223_i0reverse_frame_2 - 0.099 13.2 1.0 0.16 12.5 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1158) UPF0370 PF13980.6 NODE_50114_length_369_cov_1.646707_g42220_i0reverse_frame_2 - 0.23 11.5 0.5 0.76 9.9 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0370) DUF2417 PF10329.9 NODE_50114_length_369_cov_1.646707_g42220_i0reverse_frame_2 - 1.7 8.0 7.7 0.41 10.0 4.3 1.4 1 1 0 1 1 1 0 Region of unknown function (DUF2417) TMF_DNA_bd PF12329.8 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.00019 21.4 8.6 0.00019 21.4 8.6 2.3 1 1 1 2 2 2 1 TATA element modulatory factor 1 DNA binding KASH_CCD PF14662.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.0016 18.3 17.3 0.0054 16.6 17.2 1.8 1 1 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DUF2312 PF10073.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.01 15.5 2.6 0.056 13.1 2.7 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) IES5 PF17335.2 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.012 15.8 2.2 0.012 15.8 2.2 1.9 1 1 1 2 2 2 0 Ino80 complex subunit 5 YabA PF06156.13 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.019 15.6 17.1 0.46 11.2 10.2 3.0 1 1 1 2 2 2 0 Initiation control protein YabA ZapB PF06005.12 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.021 15.3 25.7 2.4 8.7 18.9 3.3 1 1 1 2 2 2 0 Cell division protein ZapB UPF0449 PF15136.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.021 15.3 6.2 0.021 15.3 6.2 2.2 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.026 14.6 16.2 0.18 11.9 6.4 3.3 1 1 1 3 3 3 0 bZIP transcription factor DUF4201 PF13870.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.033 13.9 13.9 0.14 11.9 3.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) TSC22 PF01166.18 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.047 14.0 15.4 1.8 9.0 0.7 3.8 1 1 3 4 4 3 0 TSC-22/dip/bun family DegS PF05384.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.048 13.1 12.7 0.061 12.8 12.7 1.2 1 0 0 1 1 1 0 Sensor protein DegS Cep57_CLD_2 PF14197.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.05 13.7 20.0 1.2 9.3 0.7 3.9 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 DUF1664 PF07889.12 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.088 12.8 5.7 0.11 12.6 5.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) NYD-SP28_assoc PF14775.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.092 12.9 9.1 12 6.1 0.2 3.7 2 1 1 3 3 3 0 Sperm tail C-terminal domain TMPIT PF07851.13 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.094 11.9 7.9 0.13 11.5 7.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein ADIP PF11559.8 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.11 12.6 19.4 0.059 13.5 14.6 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Shugoshin_N PF07558.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.11 12.4 12.9 0.31 10.9 0.9 3.8 2 1 1 3 3 3 0 Shugoshin N-terminal coiled-coil region HALZ PF02183.18 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.13 12.5 17.3 0.24 11.6 3.2 3.3 4 0 0 4 4 3 0 Homeobox associated leucine zipper MCC-bdg_PDZ PF10506.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.15 12.1 8.4 3.9 7.5 0.2 3.2 3 1 0 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Jnk-SapK_ap_N PF09744.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.18 12.0 20.6 0.13 12.5 13.7 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DUF724 PF05266.14 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.2 11.5 10.7 0.11 12.4 7.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DUF3450 PF11932.8 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.21 10.9 16.7 0.36 10.1 16.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) HMMR_N PF15905.5 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.27 10.7 18.9 0.31 10.5 18.9 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Syntaxin-6_N PF09177.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.27 11.8 9.7 1.8 9.1 9.6 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DivIC PF04977.15 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.3 10.9 27.0 0.56 10.0 6.4 4.0 1 1 3 4 4 4 0 Septum formation initiator FlaC_arch PF05377.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.31 11.4 7.9 1.2 9.6 0.9 3.2 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Cnn_1N PF07989.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.32 11.2 17.2 1.3 9.2 10.5 3.2 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 FUSC PF04632.12 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.54 8.7 3.5 0.6 8.6 3.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family KLRAQ PF10205.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.1 9.5 15.2 0.13 12.5 9.0 2.0 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein APG6_N PF17675.1 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.3 9.6 21.0 0.18 12.4 14.8 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region bZIP_2 PF07716.15 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.4 9.0 26.0 0.59 10.3 3.1 4.6 3 1 3 6 6 6 0 Basic region leucine zipper JIP_LZII PF16471.5 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.6 9.0 19.2 0.83 9.9 5.6 3.0 1 1 2 3 3 3 0 JNK-interacting protein leucine zipper II NRBF2 PF08961.10 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.8 8.1 15.5 0.5 9.9 7.1 2.2 1 1 0 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator MctB PF11382.8 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 2.1 8.0 10.1 1.1 8.9 2.6 2.3 2 1 0 2 2 2 0 Copper transport outer membrane protein, MctB DASH_Dam1 PF08653.10 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 2.2 8.2 8.4 8.3 6.3 0.6 2.8 1 1 2 3 3 3 0 DASH complex subunit Dam1 Atg14 PF10186.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 2.3 7.2 14.9 3.3 6.7 14.9 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 H-kinase_dim PF02895.14 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 3.2 8.2 10.4 2.1e+02 2.4 10.4 2.5 1 1 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain M PF02370.16 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 4.2 8.2 16.4 4.7 8.1 0.2 4.6 3 2 1 4 4 4 0 M protein repeat FAM76 PF16046.5 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 4.4 6.6 12.2 5.5 6.2 12.2 1.2 1 0 0 1 1 1 0 FAM76 protein GIT_CC PF16559.5 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 6 6.8 23.9 1.1 9.2 2.5 3.6 1 1 3 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor ArgoN PF16486.5 NODE_50111_length_369_cov_1.808383_g42217_i0reverse_frame_3 - 0.0045 17.6 0.1 0.0054 17.3 0.1 1.1 1 0 0 1 1 1 1 N-terminal domain of argonaute McrBC PF10117.9 NODE_50111_length_369_cov_1.808383_g42217_i0reverse_frame_3 - 0.013 14.6 0.1 0.016 14.4 0.1 1.1 1 0 0 1 1 1 0 McrBC 5-methylcytosine restriction system component RRM_4 PF10598.9 NODE_50111_length_369_cov_1.808383_g42217_i0forward_frame_3 - 0.083 13.2 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif of the spliceosomal PrP8 DASH_Spc34 PF08657.10 NODE_50107_length_369_cov_2.107784_g42213_i0forward_frame_2 - 0.045 13.6 0.1 0.08 12.7 0.1 1.4 2 0 0 2 2 2 0 DASH complex subunit Spc34 NPR3 PF03666.13 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.014 14.2 5.8 0.013 14.3 5.8 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Mucin PF01456.17 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.061 13.3 44.4 0.085 12.9 44.4 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF4614 PF15391.6 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.082 12.9 22.3 0.1 12.6 22.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) MGC-24 PF05283.11 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.19 12.2 23.8 0.24 11.8 23.8 1.2 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin SPX PF03105.19 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.74 9.7 13.0 0.75 9.7 13.0 1.1 1 0 0 1 1 1 0 SPX domain DUF3684 PF12449.8 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.88 7.3 9.9 0.97 7.1 9.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3684) Apt1 PF10351.9 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 3 6.6 14.4 2.9 6.6 14.4 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain FSA_C PF10479.9 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 3.1 5.8 27.8 3.3 5.7 27.8 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DAG_kinase_N PF14513.6 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 3.5 7.8 6.9 4.3 7.5 6.9 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus ASD2 PF08687.11 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 3.6 7.1 4.7 3.9 6.9 4.7 1.1 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 Otopetrin PF03189.13 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 4.4 6.0 8.7 5.1 5.8 8.7 1.0 1 0 0 1 1 1 0 Otopetrin RIFIN PF02009.16 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 4.4 7.1 10.1 5.6 6.8 10.1 1.1 1 0 0 1 1 1 0 Rifin Macoilin PF09726.9 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 5.4 5.5 12.3 5.2 5.5 12.3 1.0 1 0 0 1 1 1 0 Macoilin family SWI-SNF_Ssr4 PF08549.10 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 6.2 5.3 7.6 6.8 5.2 7.6 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) MPM1 PF17234.2 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 6.6 7.0 11.7 8.7 6.6 11.7 1.1 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 Sec10 PF07393.11 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 8.8 4.6 12.9 10 4.4 12.9 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec10 SOG2 PF10428.9 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 9.9 5.2 24.1 11 5.1 24.1 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein OPT PF03169.15 NODE_50103_length_369_cov_2.266467_g42209_i0forward_frame_3 - 0.38 9.3 11.9 0.42 9.2 11.9 1.1 1 0 0 1 1 1 0 OPT oligopeptide transporter protein Anoctamin PF04547.12 NODE_50103_length_369_cov_2.266467_g42209_i0forward_frame_3 - 1.6 7.5 7.5 1.9 7.2 7.5 1.3 1 0 0 1 1 1 0 Calcium-activated chloride channel KRTAP PF11759.8 NODE_50103_length_369_cov_2.266467_g42209_i0forward_frame_2 - 3.2 8.4 18.9 0.38 11.3 14.9 1.5 2 0 0 2 2 2 0 Keratin-associated matrix SR-25 PF10500.9 NODE_50103_length_369_cov_2.266467_g42209_i0forward_frame_2 - 5.6 6.5 15.5 8.4 5.9 15.5 1.4 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Peptidase_M16_C PF05193.21 NODE_50100_length_369_cov_2.556886_g42206_i0reverse_frame_3 - 3.7e-07 30.4 0.1 4.2e-07 30.2 0.1 1.0 1 0 0 1 1 1 1 Peptidase M16 inactive domain 2OG-FeII_Oxy_3 PF13640.6 NODE_50097_length_369_cov_2.646707_g42203_i0reverse_frame_3 - 1.6e-13 51.3 0.0 2e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 NODE_50097_length_369_cov_2.646707_g42203_i0reverse_frame_3 - 0.017 15.6 0.0 0.083 13.3 0.0 1.9 1 1 1 2 2 2 0 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy PF03171.20 NODE_50097_length_369_cov_2.646707_g42203_i0reverse_frame_3 - 0.031 14.8 0.1 0.044 14.3 0.1 1.3 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily GAGA PF09237.11 NODE_50097_length_369_cov_2.646707_g42203_i0reverse_frame_2 - 0.25 11.2 2.3 0.39 10.6 0.2 2.2 2 0 0 2 2 2 0 GAGA factor DUF3681 PF12442.8 NODE_50097_length_369_cov_2.646707_g42203_i0forward_frame_2 - 0.036 14.5 0.3 0.052 14.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3681) Mitoc_L55 PF09776.9 NODE_50092_length_369_cov_3.736527_g42198_i0reverse_frame_3 - 0.038 13.7 1.0 0.58 9.9 0.2 2.3 2 1 0 2 2 2 0 Mitochondrial ribosomal protein L55 Mitoc_L55 PF09776.9 NODE_50092_length_369_cov_3.736527_g42198_i0reverse_frame_2 - 0.16 11.7 2.5 0.36 10.6 2.4 1.8 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L55 COX8 PF02285.15 NODE_50092_length_369_cov_3.736527_g42198_i0forward_frame_3 - 1.4 8.8 8.1 4.4 7.2 2.2 2.5 2 0 0 2 2 2 0 Cytochrome oxidase c subunit VIII Med19 PF10278.9 NODE_50089_length_369_cov_32.410180_g42195_i0forward_frame_3 - 0.073 13.0 0.1 0.077 12.9 0.1 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF3217 PF11506.8 NODE_50087_length_369_cov_41.248503_g42193_i0forward_frame_3 - 0.11 12.5 0.1 0.17 11.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3217) PTB PF08416.13 NODE_50087_length_369_cov_41.248503_g42193_i0forward_frame_2 - 0.12 12.5 0.3 0.22 11.7 0.3 1.4 1 1 0 1 1 1 0 Phosphotyrosine-binding domain LRR_12 PF18837.1 NODE_50083_length_369_cov_51.790419_g42189_i0reverse_frame_3 - 0.035 13.8 1.3 0.071 12.8 1.3 1.5 1 0 0 1 1 1 0 Leucine-rich repeat UPF0370 PF13980.6 NODE_50083_length_369_cov_51.790419_g42189_i0reverse_frame_2 - 0.095 12.7 0.1 0.33 11.0 0.1 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0370) Lysis_col PF02402.16 NODE_50083_length_369_cov_51.790419_g42189_i0forward_frame_3 - 0.17 11.6 0.5 0.45 10.2 0.5 1.6 1 0 0 1 1 1 0 Lysis protein RGS12_us2 PF16611.5 NODE_50076_length_369_cov_76.000000_g42182_i0forward_frame_2 - 0.11 12.9 0.2 0.21 12.0 0.2 1.4 1 0 0 1 1 1 0 Unstructured region between RBD and GoLoco Pox_G9-A16 PF03003.16 NODE_50076_length_369_cov_76.000000_g42182_i0forward_frame_2 - 0.45 10.2 4.6 0.57 9.9 4.6 1.2 1 0 0 1 1 1 0 Pox virus entry-fusion-complex G9/A16 TCTP PF00838.17 NODE_50075_length_369_cov_76.473054_g42181_i0forward_frame_2 - 0.015 15.7 0.0 0.019 15.3 0.0 1.1 1 0 0 1 1 1 0 Translationally controlled tumour protein DUF4632 PF15451.6 NODE_50071_length_369_cov_81.191617_g42177_i0reverse_frame_3 - 0.2 11.8 0.1 0.2 11.8 0.1 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4632) JmjC PF02373.22 NODE_50065_length_369_cov_108.970060_g42171_i0reverse_frame_3 - 4.6e-06 27.0 0.0 6.3e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_4 PF08007.12 NODE_50065_length_369_cov_108.970060_g42171_i0reverse_frame_3 - 0.00011 21.8 0.0 0.00012 21.7 0.0 1.2 1 0 0 1 1 1 1 Cupin superfamily protein Cupin_8 PF13621.6 NODE_50065_length_369_cov_108.970060_g42171_i0reverse_frame_3 - 0.0022 17.8 0.0 0.0027 17.4 0.0 1.1 1 0 0 1 1 1 1 Cupin-like domain HTH_42 PF06224.12 NODE_50065_length_369_cov_108.970060_g42171_i0reverse_frame_3 - 0.023 14.2 1.0 0.028 14.0 1.0 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain FPV060 PF17614.2 NODE_50065_length_369_cov_108.970060_g42171_i0reverse_frame_2 - 3.2 7.1 5.1 1.9 7.9 1.0 1.9 1 1 1 2 2 2 0 Viral CC-type chemokine RCR PF12273.8 NODE_50065_length_369_cov_108.970060_g42171_i0forward_frame_2 - 0.12 13.0 0.2 0.54 10.9 0.3 1.8 1 1 0 2 2 2 0 Chitin synthesis regulation, resistance to Congo red # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks190.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks190.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks190.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks190.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- p450 PF00067.22 NODE_50063_length_369_cov_115.880240_g42169_i0forward_frame_2 - 3.3e-14 52.5 0.1 3.9e-14 52.3 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 EBP PF05241.12 NODE_50061_length_369_cov_147.485030_g42167_i0forward_frame_3 - 0.12 11.8 0.5 0.18 11.3 0.5 1.3 1 0 0 1 1 1 0 Emopamil binding protein OSR1_C PF12202.8 NODE_50061_length_369_cov_147.485030_g42167_i0forward_frame_2 - 0.21 11.8 0.0 0.28 11.4 0.0 1.1 1 0 0 1 1 1 0 Oxidative-stress-responsive kinase 1 C-terminal domain DUF4483 PF14825.6 NODE_50060_length_369_cov_195.488024_g42166_i0reverse_frame_3 - 0.04 13.7 0.7 0.055 13.2 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4483) DUF5601 PF18151.1 NODE_50060_length_369_cov_195.488024_g42166_i0reverse_frame_3 - 0.063 13.6 0.1 0.13 12.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5601) SIN1 PF05422.12 NODE_50059_length_369_cov_209.649701_g42165_i0reverse_frame_3 - 0.069 13.7 2.3 0.087 13.4 2.3 1.1 1 0 0 1 1 1 0 Stress-activated map kinase interacting protein 1 (SIN1) Popeye PF04831.13 NODE_50059_length_369_cov_209.649701_g42165_i0forward_frame_3 - 0.17 12.0 4.5 0.24 11.6 4.5 1.2 1 0 0 1 1 1 0 Popeye protein conserved region YMF19 PF02326.15 NODE_50058_length_369_cov_211.634731_g42164_i0forward_frame_3 - 0.011 16.5 1.2 0.016 16.0 0.8 1.4 1 1 0 1 1 1 0 Plant ATP synthase F0 zf-LITAF-like PF10601.9 NODE_50054_length_369_cov_445.419162_g42160_i0forward_frame_2 - 3.1e-12 46.6 22.7 4.1e-12 46.2 22.7 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF3239 PF11580.8 NODE_50054_length_369_cov_445.419162_g42160_i0forward_frame_2 - 0.002 18.4 0.4 0.0026 18.1 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3239) DUF5401 PF17380.2 NODE_50054_length_369_cov_445.419162_g42160_i0forward_frame_2 - 0.19 9.8 0.3 0.23 9.5 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) LEP503 PF15221.6 NODE_50049_length_369_cov_2295.395210_g42155_i0reverse_frame_2 - 1.4 9.3 11.0 1.2 9.5 9.3 1.9 2 1 0 2 2 2 0 Lens epithelial cell protein LEP503 Kelch_6 PF13964.6 ORF99672 - 1e-05 25.6 0.1 0.022 15.0 0.0 2.4 1 1 1 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF99672 - 2.9e-05 23.6 0.3 0.066 12.8 0.0 3.0 3 1 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 ORF99672 - 0.0031 17.4 0.0 0.012 15.6 0.0 1.9 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 ORF99672 - 0.0039 17.2 0.0 0.0076 16.2 0.0 1.6 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF99672 - 0.11 12.9 0.0 0.3 11.4 0.0 1.8 1 1 1 2 2 2 0 Galactose oxidase, central domain Ribosomal_L29 PF00831.23 ORF99115 - 4.9e-16 58.5 4.6 4.9e-16 58.5 4.6 2.2 2 0 0 2 2 2 1 Ribosomal L29 protein Snapin_Pallidin PF14712.6 ORF99115 - 0.017 15.5 3.9 0.017 15.5 3.9 1.9 2 0 0 2 2 2 0 Snapin/Pallidin Herpes_LP PF03363.13 ORF98944 - 0.066 13.0 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus leader protein Tautomerase_3 PF14832.6 ORF98569 - 0.028 14.6 0.3 0.036 14.3 0.3 1.1 1 0 0 1 1 1 0 Putative oxalocrotonate tautomerase enzyme RecG_N PF17190.4 ORF98569 - 0.04 14.6 5.2 5.4 7.8 4.3 2.4 1 1 0 2 2 2 0 RecG N-terminal helical domain Pex14_N PF04695.13 ORF98377 - 0.23 12.1 3.1 0.27 11.9 3.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region YrhC PF14143.6 ORF97849 - 4.5 7.4 5.6 3.8 7.7 0.7 2.7 2 1 1 3 3 3 0 YrhC-like protein Peptidase_M17 PF00883.21 ORF97239 - 9.9e-16 57.9 0.6 1.2e-15 57.7 0.6 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain MatE PF01554.18 ORF93632 - 2.4e-21 76.0 9.7 2.6e-21 75.9 9.7 1.0 1 0 0 1 1 1 1 MatE Syndecan PF01034.20 ORF93632 - 0.14 12.1 1.4 1.4 8.9 0.2 2.4 2 0 0 2 2 2 0 Syndecan domain DUF1673 PF07895.11 ORF93632 - 0.53 10.0 7.8 0.074 12.7 4.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1673) DUF4181 PF13789.6 ORF93632 - 3.1 8.1 10.1 6.1 7.2 10.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4181) Kelch_6 PF13964.6 ORF93115 - 1e-05 25.6 0.1 0.022 15.0 0.0 2.4 1 1 1 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF93115 - 2.9e-05 23.6 0.3 0.066 12.8 0.0 3.0 3 1 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 ORF93115 - 0.0031 17.4 0.0 0.012 15.6 0.0 1.9 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 ORF93115 - 0.0039 17.2 0.0 0.0076 16.2 0.0 1.6 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF93115 - 0.11 12.9 0.0 0.3 11.4 0.0 1.8 1 1 1 2 2 2 0 Galactose oxidase, central domain Bac_luciferase PF00296.20 ORF90855 - 0.0001 21.9 0.5 0.00012 21.7 0.5 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Arrestin_N PF00339.29 ORF90597 - 4e-12 46.4 0.0 4.6e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Rgp1 PF08737.10 ORF90597 - 0.033 13.4 0.0 3.1 6.9 0.0 2.0 2 0 0 2 2 2 0 Rgp1 Glutaredoxin PF00462.24 ORF90514 - 1e-11 44.8 0.2 2.2e-11 43.8 0.2 1.5 2 0 0 2 2 2 1 Glutaredoxin Thioredoxin_2 PF13098.6 ORF90514 - 0.0098 16.3 0.5 0.023 15.1 0.5 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain DUF836 PF05768.14 ORF90514 - 0.029 14.8 0.1 0.043 14.2 0.1 1.4 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) UL17 PF17640.2 ORF89771 - 0.58 10.2 5.7 0.23 11.5 2.7 1.7 1 1 1 2 2 2 0 Uncharacterized UL17 2H-phosphodiest PF08975.10 ORF89739 - 0.035 14.1 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1868) DUF2721 PF11026.8 ORF89739 - 0.12 12.2 0.1 0.16 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Na_Ca_ex PF01699.24 ORF88158 - 1.3e-16 61.0 7.4 1.3e-16 60.9 7.4 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein GCM PF03615.15 ORF86609 - 0.09 12.7 0.0 8.1 6.3 0.0 2.0 1 1 1 2 2 2 0 GCM motif protein Methyltransf_23 PF13489.6 ORF85369 - 1.5e-11 44.4 0.0 1.6e-11 44.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF85369 - 2.7e-08 34.3 0.1 3.9e-08 33.8 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF85369 - 2.3e-05 25.1 0.0 3.5e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF85369 - 0.0014 18.4 0.0 0.0014 18.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF85369 - 0.0043 16.4 0.0 0.0044 16.3 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 ORF85369 - 0.039 14.6 0.0 0.06 14.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain YoeB_toxin PF06769.14 ORF84444 - 0.045 13.8 0.0 0.079 13.0 0.0 1.4 1 1 0 1 1 1 0 YoeB-like toxin of bacterial type II toxin-antitoxin system DUF4116 PF13475.6 ORF82907 - 5.5e-29 99.6 0.0 1e-11 44.4 0.0 3.0 2 1 1 3 3 3 3 Domain of unknown function (DUF4116) CdhD PF03599.16 ORF82907 - 0.13 10.9 0.2 0.15 10.8 0.2 1.0 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit MORN PF02493.20 ORF82622 - 2.3e-07 30.3 8.9 0.0013 18.5 0.3 2.9 3 1 0 3 3 3 2 MORN repeat Rv2175c_C PF18367.1 ORF82574 - 0.095 12.8 0.1 0.24 11.5 0.1 1.6 1 0 0 1 1 1 0 Rv2175c C-terminal domain of unknown function DUF5549 PF17703.1 ORF82574 - 0.85 9.3 7.5 0.82 9.3 7.3 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5549) Evr1_Alr PF04777.13 ORF82362 - 4.3e-07 30.3 0.2 9.7e-07 29.2 0.2 1.5 2 0 0 2 2 2 1 Erv1 / Alr family Cdd1 PF11731.8 ORF82362 - 0.081 13.2 0.0 0.22 11.8 0.0 1.7 2 0 0 2 2 2 0 Pathogenicity locus MFS_1 PF07690.16 ORF8183 - 0.0019 17.2 9.5 0.0021 17.1 9.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MCLC PF05934.11 ORF81109 - 0.1 11.3 0.3 0.1 11.3 0.3 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) MIF4G PF02854.19 ORF80831 - 0.11 12.1 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 MIF4G domain Sh_2 PF17512.2 ORF80796 - 0.061 13.1 0.3 0.081 12.7 0.3 1.2 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein UEV PF05743.13 ORF80194 - 0.077 12.9 0.8 0.21 11.5 0.3 1.8 1 1 1 2 2 2 0 UEV domain Hydrophobin_2 PF06766.11 ORF80075 - 0.056 13.4 1.6 0.094 12.7 1.6 1.4 1 0 0 1 1 1 0 Fungal hydrophobin DUF885 PF05960.11 ORF77975 - 0.33 10.5 0.2 0.37 10.4 0.2 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) GSHPx PF00255.19 ORF77385 - 7.7e-23 80.1 2.2 1.2e-22 79.6 2.2 1.3 1 0 0 1 1 1 1 Glutathione peroxidase Caleosin PF05042.13 ORF77385 - 0.026 14.5 0.1 0.033 14.1 0.1 1.1 1 0 0 1 1 1 0 Caleosin related protein EamA PF00892.20 ORF77349 - 6.5e-11 42.6 14.7 7.5e-11 42.4 14.7 1.1 1 0 0 1 1 1 1 EamA-like transporter family TPT PF03151.16 ORF77349 - 0.0017 17.7 2.7 0.0018 17.7 2.7 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family TCR_zetazeta PF11628.8 ORF77349 - 0.028 14.1 1.7 0.038 13.7 0.1 2.2 2 1 0 2 2 2 0 T-cell surface glycoprotein CD3 zeta chain DUF2070 PF09843.9 ORF77349 - 5.5 5.2 9.4 6.2 5.0 9.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Neuropeptide_S PF14993.6 ORF77344 - 1.5e-05 24.7 0.2 0.21 11.4 0.0 2.3 2 0 0 2 2 2 2 Neuropeptide S precursor protein Cutinase PF01083.22 ORF77344 - 0.025 14.5 1.6 0.61 10.0 0.3 2.0 1 1 1 2 2 2 0 Cutinase adh_short_C2 PF13561.6 ORF75458 - 7.6e-25 87.8 0.4 8.2e-25 87.7 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF75458 - 3.4e-19 69.1 0.8 4.2e-19 68.8 0.8 1.1 1 0 0 1 1 1 1 short chain dehydrogenase TadE PF07811.12 ORF75179 - 0.075 13.3 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 TadE-like protein Gsf2 PF11055.8 ORF74178 - 0.11 11.3 0.3 0.11 11.3 0.3 1.1 1 0 0 1 1 1 0 Glucose signalling factor 2 EcoR124_C PF12008.8 ORF73921 - 0.067 12.8 6.4 0.071 12.7 6.4 1.1 1 0 0 1 1 1 0 Type I restriction and modification enzyme - subunit R C terminal WD40 PF00400.32 ORF7331 - 4.6e-08 33.6 0.9 0.0057 17.5 0.0 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat PQQ PF01011.21 ORF7331 - 0.00019 21.2 0.0 0.0012 18.7 0.0 2.0 2 0 0 2 2 2 1 PQQ enzyme repeat Cytochrom_D1 PF02239.16 ORF7331 - 0.0094 14.5 0.0 0.01 14.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome D1 heme domain ANAPC4_WD40 PF12894.7 ORF7331 - 0.029 14.6 0.0 0.094 13.0 0.0 1.7 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain PQQ_3 PF13570.6 ORF7331 - 0.06 13.9 0.0 0.13 12.8 0.0 1.5 1 0 0 1 1 1 0 PQQ-like domain DUF3760 PF12586.8 ORF72948 - 0.26 11.5 1.5 0.65 10.2 0.3 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3760) TMEM214 PF10151.9 ORF70813 - 5.1 5.4 5.2 6 5.2 5.2 1.1 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator DUF853 PF05872.12 ORF70813 - 6.5 5.2 7.4 7.2 5.1 7.4 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) LAP1C PF05609.12 ORF70813 - 9.1 5.2 13.6 9.8 5.1 13.6 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) HATPase_c PF02518.26 ORF70696 - 1.6e-16 60.8 0.0 1.7e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF70696 - 0.001 18.9 0.2 0.0014 18.5 0.2 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF70696 - 0.014 15.4 0.0 0.017 15.1 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 ORF70696 - 0.018 14.9 0.1 0.022 14.7 0.1 1.2 1 0 0 1 1 1 0 GHKL domain Ldr_toxin PF13940.6 ORF70428 - 0.075 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system HEPN_SAV_6107 PF18726.1 ORF70428 - 0.11 13.0 0.9 33 5.1 0.3 2.9 1 1 1 2 2 2 0 SAV_6107-like HEPN DUF3636 PF12331.8 ORF70166 - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3636) p25-alpha PF05517.12 ORF69096 - 0.0023 18.1 5.5 0.033 14.3 3.6 2.1 1 1 1 2 2 2 2 p25-alpha Carbam_trans_C PF16861.5 ORF69096 - 0.12 11.9 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Carbamoyltransferase C-terminus SR-25 PF10500.9 ORF67255 - 0.0021 17.7 25.2 0.0024 17.5 25.2 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein Dsh_C PF12316.8 ORF67255 - 0.012 16.1 10.5 0.013 15.9 10.5 1.0 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal DUF966 PF06136.13 ORF67255 - 0.057 13.1 10.3 0.065 12.9 10.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF966) DUF3807 PF12720.7 ORF67255 - 0.073 13.3 17.1 0.09 13.0 17.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) NAM-associated PF14303.6 ORF67255 - 0.12 13.1 20.0 0.13 12.9 20.0 1.1 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain GAGA_bind PF06217.12 ORF67255 - 0.2 11.9 15.6 0.23 11.7 15.6 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Bul1_C PF04426.12 ORF67255 - 0.27 10.6 5.9 0.27 10.6 5.9 1.2 1 0 0 1 1 1 0 Bul1 C terminus SCP1201-deam PF14428.6 ORF67255 - 0.31 10.9 2.6 0.41 10.5 2.6 1.2 1 0 0 1 1 1 0 SCP1.201-like deaminase Neur_chan_memb PF02932.16 ORF67255 - 0.34 10.9 7.9 0.38 10.8 7.9 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Zip PF02535.22 ORF67255 - 0.6 9.3 8.5 0.61 9.2 8.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter S36_mt PF10937.8 ORF67255 - 0.71 11.5 8.5 1.6 10.4 8.4 1.5 1 1 0 1 1 1 0 Ribosomal protein S36, mitochondrial Gti1_Pac2 PF09729.9 ORF67255 - 0.72 9.9 13.4 0.93 9.6 13.4 1.2 1 0 0 1 1 1 0 Gti1/Pac2 family SpoIIIAH PF12685.7 ORF67255 - 0.81 9.5 14.6 0.96 9.2 14.6 1.1 1 0 0 1 1 1 0 SpoIIIAH-like protein DDHD PF02862.17 ORF67255 - 1.2 9.3 7.8 1.4 9.1 7.8 1.3 1 0 0 1 1 1 0 DDHD domain RR_TM4-6 PF06459.12 ORF67255 - 1.3 8.8 15.5 1.4 8.7 15.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Apt1 PF10351.9 ORF67255 - 1.3 7.8 12.9 1.4 7.7 12.9 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Vfa1 PF08432.10 ORF67255 - 1.4 9.2 19.0 1.7 8.9 19.0 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Presenilin PF01080.17 ORF67255 - 1.8 7.2 12.1 2 7.1 12.1 1.0 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 ORF67255 - 1.8 6.7 16.5 2.1 6.6 16.5 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4614 PF15391.6 ORF67255 - 2.2 8.2 11.2 2.7 8.0 11.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) SLC12 PF03522.15 ORF67255 - 2.8 6.9 11.5 3.2 6.7 11.5 1.0 1 0 0 1 1 1 0 Solute carrier family 12 PPL5 PF18168.1 ORF67255 - 2.9 7.1 10.8 3.2 7.0 10.8 1.1 1 0 0 1 1 1 0 Prim-pol family 5 Band_3_cyto PF07565.13 ORF67255 - 5.5 6.7 8.6 6.2 6.5 8.6 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain EOS1 PF12326.8 ORF67255 - 6.2 6.7 6.6 7.1 6.5 6.6 1.2 1 0 0 1 1 1 0 N-glycosylation protein Connexin PF00029.19 ORF67255 - 8.4 6.1 10.0 11 5.7 10.0 1.4 1 0 0 1 1 1 0 Connexin NPR3 PF03666.13 ORF67255 - 9.3 4.9 16.2 11 4.7 16.2 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 ANAPC_CDC26 PF10471.9 ORF65931 - 1.9e-07 31.8 0.4 3.2e-07 31.1 0.3 1.6 1 1 1 2 2 2 1 Anaphase-promoting complex APC subunit CDC26 SYCP2_ARLD PF18581.1 ORF64885 - 0.0063 16.5 0.4 0.0085 16.1 0.4 1.2 1 0 0 1 1 1 1 Synaptonemal complex 2 armadillo-repeat-like domain AAA_25 PF13481.6 ORF64800 - 0.14 11.7 0.2 0.26 10.8 0.2 1.4 1 0 0 1 1 1 0 AAA domain FKBP_C PF00254.28 ORF63966 - 5.5e-14 52.3 0.0 5.9e-14 52.2 0.0 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DSBA PF01323.20 ORF63569 - 0.017 14.9 0.2 0.022 14.5 0.2 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Bax1-I PF01027.20 ORF63551 - 5.2e-07 29.7 6.3 6.3e-07 29.4 6.3 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 APG6 PF04111.12 ORF62770 - 0.03 14.3 0.2 0.033 14.1 0.2 1.1 1 0 0 1 1 1 0 Apg6 BARA domain DUF2157 PF09925.9 ORF62410 - 0.0083 15.9 0.2 0.012 15.4 0.2 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2157) CwsA PF10814.8 ORF62410 - 0.18 12.0 7.5 1.7 8.8 0.8 2.2 1 1 1 2 2 2 0 Cell wall synthesis protein CwsA BSD PF03909.17 ORF62358 - 0.081 12.9 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 BSD domain AIG1 PF04548.16 ORF61790 - 0.023 14.0 0.0 0.028 13.7 0.0 1.1 1 0 0 1 1 1 0 AIG1 family C9orf72-like PF15019.6 ORF61410 - 0.0047 16.5 0.0 0.0059 16.2 0.0 1.1 1 0 0 1 1 1 1 C9orf72-like protein family ubiquitin PF00240.23 ORF612 - 7e-34 115.4 0.3 8.3e-34 115.2 0.3 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF612 - 8.9e-16 57.5 0.7 1.1e-15 57.3 0.7 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF612 - 3.6e-05 24.1 0.1 0.00013 22.3 0.1 1.7 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF612 - 0.005 16.7 0.0 0.0063 16.4 0.0 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF612 - 0.0068 16.7 0.0 0.0086 16.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF612 - 0.013 15.5 0.0 0.028 14.5 0.0 1.5 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF612 - 0.025 14.6 1.1 6.1 7.0 0.0 2.1 2 0 0 2 2 2 0 Ubiquitin-like domain DUF2407 PF10302.9 ORF612 - 0.059 13.9 0.1 0.077 13.6 0.1 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF612 - 0.15 11.9 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain TMEM43 PF07787.12 ORF612 - 0.34 10.2 1.2 0.45 9.9 1.1 1.3 1 1 0 1 1 1 0 Transmembrane protein 43 WASH-7_mid PF14744.6 ORF60974 - 0.013 14.6 1.3 0.014 14.5 1.3 1.0 1 0 0 1 1 1 0 WASH complex subunit 7 ubiquitin PF00240.23 ORF60403 - 0.0056 16.4 0.1 0.01 15.6 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin family pXO2-34 PF17362.2 ORF60381 - 0.08 12.8 0.2 0.13 12.1 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function Rep_fac_C PF08542.11 ORF59430 - 2.2e-08 34.4 0.1 2.7e-08 34.1 0.1 1.2 1 0 0 1 1 1 1 Replication factor C C-terminal domain CPBP PF02517.16 ORF59264 - 0.076 13.4 1.1 0.11 12.9 1.1 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease adh_short_C2 PF13561.6 ORF59118 - 6.3e-30 104.5 0.2 6.6e-30 104.4 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF59118 - 2e-17 63.3 0.1 2.7e-17 62.8 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase PDZ_6 PF17820.1 ORF58729 - 4.9e-11 42.3 0.2 4.7e-05 23.1 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF58729 - 1.9e-06 28.1 0.1 0.029 14.7 0.0 2.2 2 0 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF58729 - 1.4e-05 25.4 0.6 0.011 16.0 0.1 2.2 1 1 1 2 2 2 2 PDZ domain Kelch_4 PF13418.6 ORF58452 - 2e-10 40.5 0.5 0.0002 21.3 0.0 2.4 2 1 0 2 2 2 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF58452 - 6.8e-08 32.5 0.6 0.00032 20.9 0.1 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF58452 - 1.5e-06 28.0 1.4 0.0099 15.8 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 ORF58452 - 7.6e-05 22.5 1.8 0.0069 16.3 0.3 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 ORF58452 - 0.0018 18.5 0.2 0.011 15.9 0.1 2.1 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF58452 - 0.022 14.3 1.1 0.11 12.2 0.1 2.1 2 0 0 2 2 2 0 Kelch motif ASH PF15780.5 ORF58452 - 0.072 13.3 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Mito_carr PF00153.27 ORF57956 - 2.1e-08 34.0 0.0 2.7e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein Ribosomal_L5_C PF00673.21 ORF57841 - 7.1e-23 80.6 0.0 8.4e-23 80.4 0.0 1.1 1 0 0 1 1 1 1 ribosomal L5P family C-terminus HTH_ABP1_N PF18107.1 ORF57841 - 0.034 13.9 0.2 0.083 12.6 0.0 1.7 2 0 0 2 2 2 0 Fission yeast centromere protein N-terminal domain POT1 PF02765.17 ORF57562 - 0.043 13.6 0.0 0.054 13.3 0.0 1.2 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 Actin PF00022.19 ORF57313 - 3.2e-22 78.7 0.0 2.8e-21 75.6 0.0 1.9 1 1 0 1 1 1 1 Actin Tape_meas_lam_C PF09718.10 ORF56997 - 0.033 14.3 0.0 0.053 13.7 0.0 1.3 1 0 0 1 1 1 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) DUF1573 PF07610.11 ORF56519 - 0.041 13.9 0.0 0.051 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1573) MNE1 PF13762.6 ORF56319 - 0.42 10.6 3.4 0.52 10.3 3.4 1.3 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component Pex14_N PF04695.13 ORF55028 - 0.23 12.1 3.1 0.27 11.9 3.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region PCAF_N PF06466.11 ORF53893 - 0.13 11.8 6.4 1.5 8.3 0.4 2.0 1 1 1 2 2 2 0 PCAF (P300/CBP-associated factor) N-terminal domain La PF05383.17 ORF51066 - 1.4e-13 50.7 0.0 2e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 La domain RNase_P_Rpp14 PF01900.19 ORF51066 - 0.11 12.7 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Rpp14/Pop5 family SAYSvFN PF10260.9 ORF50217 - 0.0079 16.1 0.1 2.1 8.3 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved domain (SAYSvFN) SNF PF00209.18 ORF49763 - 8.5e-24 84.1 9.4 9.2e-24 84.0 9.4 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family PgaD PF13994.6 ORF49763 - 0.56 10.2 4.3 0.3 11.2 2.1 1.7 1 1 1 2 2 2 0 PgaD-like protein SHIPPO-rpt PF07004.12 ORF49402 - 1.8e-05 25.4 8.8 0.014 16.3 0.4 2.7 2 1 0 2 2 2 2 Sperm-tail PG-rich repeat Ribosomal_L29 PF00831.23 ORF49239 - 4.9e-16 58.5 4.6 4.9e-16 58.5 4.6 2.2 2 0 0 2 2 2 1 Ribosomal L29 protein Snapin_Pallidin PF14712.6 ORF49239 - 0.017 15.5 3.9 0.017 15.5 3.9 1.9 2 0 0 2 2 2 0 Snapin/Pallidin Toxin-deaminase PF14424.6 ORF48853 - 2e-05 24.7 0.0 2.5e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases dCMP_cyt_deam_1 PF00383.23 ORF48853 - 0.0018 18.1 0.1 0.0033 17.3 0.1 1.5 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region NAD1 PF18778.1 ORF48853 - 0.0034 17.5 0.1 0.0041 17.2 0.1 1.1 1 0 0 1 1 1 1 Novel AID APOBEC clade 1 SNAD4 PF18750.1 ORF48853 - 0.012 15.7 0.1 0.016 15.3 0.1 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC3 PF18771.1 ORF48853 - 0.058 13.5 0.1 0.076 13.1 0.1 1.2 1 0 0 1 1 1 0 APOBEC3 APOBEC2 PF18772.1 ORF48853 - 0.13 12.3 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 APOBEC2 Alba PF01918.21 ORF48284 - 1.7e-06 27.8 0.0 3e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Alba Copine PF07002.16 ORF47479 - 8.5e-08 31.9 0.0 9e-08 31.8 0.0 1.0 1 0 0 1 1 1 1 Copine DUF4179 PF13786.6 ORF47225 - 0.0094 16.4 0.6 0.012 16.0 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF47225 - 0.021 14.2 0.1 0.026 13.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) vWA-TerF-like PF10138.9 ORF47225 - 0.081 13.0 0.2 0.092 12.8 0.2 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus Carb_anhydrase PF00194.21 ORF47149 - 0.028 14.0 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic-type carbonic anhydrase RhaT PF06379.12 ORF47149 - 0.13 11.4 0.1 0.16 11.1 0.1 1.1 1 0 0 1 1 1 0 L-rhamnose-proton symport protein (RhaT) Herpes_capsid PF06112.11 ORF46944 - 0.018 15.1 0.0 0.026 14.6 0.0 1.3 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF2457 PF10446.9 ORF46463 - 0.67 9.0 10.0 0.74 8.9 10.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) PAN_1 PF00024.26 ORF46372 - 0.012 15.5 0.1 0.019 14.9 0.1 1.4 1 0 0 1 1 1 0 PAN domain PAN_4 PF14295.6 ORF46372 - 0.045 13.7 1.5 0.045 13.7 1.5 1.8 2 0 0 2 2 2 0 PAN domain DUF2381 PF09544.10 ORF45981 - 0.1 12.1 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2381) Gsf2 PF11055.8 ORF44049 - 0.11 11.3 0.3 0.11 11.3 0.3 1.1 1 0 0 1 1 1 0 Glucose signalling factor 2 FtsX PF02687.21 ORF43468 - 0.22 12.0 7.8 0.36 11.3 7.8 1.4 1 0 0 1 1 1 0 FtsX-like permease family NTP_transf_4 PF13562.6 ORF43347 - 0.068 13.4 0.1 0.086 13.0 0.1 1.1 1 0 0 1 1 1 0 Sugar nucleotidyl transferase DUF1887 PF09002.11 ORF43143 - 0.15 10.7 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) K-box PF01486.17 ORF43070 - 0.0052 16.9 10.3 0.028 14.6 4.3 2.3 2 0 0 2 2 2 1 K-box region Amidase PF01425.21 ORF43070 - 0.008 15.2 1.3 0.0096 14.9 1.3 1.0 1 0 0 1 1 1 1 Amidase Leu_zip PF15294.6 ORF43070 - 0.0094 15.5 13.0 0.011 15.3 13.0 1.0 1 0 0 1 1 1 1 Leucine zipper DUF935 PF06074.12 ORF43070 - 0.035 12.8 3.6 0.041 12.6 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF935) TSC22 PF01166.18 ORF43070 - 0.11 12.8 7.1 4 7.8 0.2 2.5 2 0 0 2 2 2 0 TSC-22/dip/bun family DUF1690 PF07956.11 ORF43070 - 0.22 11.9 10.3 0.28 11.6 10.3 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DivIC PF04977.15 ORF43070 - 0.5 10.2 13.2 1.3 8.9 3.7 2.3 1 1 1 2 2 2 0 Septum formation initiator Osmo_CC PF08946.10 ORF43070 - 0.5 10.6 11.6 0.78 10.0 0.3 3.2 2 1 1 3 3 3 0 Osmosensory transporter coiled coil Ax_dynein_light PF10211.9 ORF43070 - 0.8 9.6 14.1 1.9 8.4 13.7 1.7 1 1 1 2 2 2 0 Axonemal dynein light chain bZIP_1 PF00170.21 ORF43070 - 0.81 9.8 12.9 3.9 7.6 5.2 2.4 1 1 2 3 3 3 0 bZIP transcription factor Mgr1 PF08602.10 ORF43070 - 0.82 8.4 6.5 0.94 8.2 6.5 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit BST2 PF16716.5 ORF43070 - 0.88 10.2 13.4 3.1 8.4 5.0 2.1 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 ZapB PF06005.12 ORF43070 - 0.94 10.0 16.9 6.9 7.2 3.4 2.3 1 1 1 2 2 2 0 Cell division protein ZapB CENP-H PF05837.12 ORF43070 - 0.96 9.9 12.0 1.2 9.5 11.7 1.4 1 1 0 1 1 1 0 Centromere protein H (CENP-H) FapA PF03961.13 ORF43070 - 1 7.9 11.1 1.1 7.7 11.1 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF2681 PF10883.8 ORF43070 - 1 9.8 8.0 1.6 9.2 8.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) DASH_Dad3 PF08656.10 ORF43070 - 1.9 8.6 8.1 0.83 9.8 1.6 2.5 1 1 1 2 2 2 0 DASH complex subunit Dad3 bZIP_2 PF07716.15 ORF43070 - 2.8 8.1 11.5 2.6 8.2 1.5 2.5 2 0 0 2 2 2 0 Basic region leucine zipper Mto2_bdg PF12808.7 ORF43070 - 4.1 7.8 10.6 0.17 12.2 1.6 2.7 1 1 2 3 3 3 0 Micro-tubular organiser Mto1 C-term Mto2-binding region FlxA PF14282.6 ORF43070 - 7.3 6.6 19.3 0.54 10.3 5.9 2.4 1 1 1 2 2 2 0 FlxA-like protein YabA PF06156.13 ORF43070 - 9.7 6.9 12.8 39 5.0 11.1 2.0 1 1 1 2 2 2 0 Initiation control protein YabA NYD-SP28_assoc PF14775.6 ORF43070 - 9.8 6.4 11.5 4.7 7.4 2.1 3.0 2 1 1 3 3 3 0 Sperm tail C-terminal domain Corona_NSP4_C PF16348.5 ORF41726 - 0.046 14.5 2.3 0.63 10.9 1.6 2.1 1 1 1 2 2 2 0 Coronavirus nonstructural protein 4 C-terminus DUF2584 PF10763.9 ORF40711 - 0.091 12.9 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2584) N-glycanase_C PF09113.10 ORF3832 - 0.014 15.2 0.4 0.018 14.8 0.4 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal Kelch_6 PF13964.6 ORF38198 - 1e-05 25.6 0.1 0.022 15.0 0.0 2.4 1 1 1 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF38198 - 2.9e-05 23.6 0.3 0.066 12.8 0.0 3.0 3 1 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 ORF38198 - 0.0031 17.4 0.0 0.012 15.6 0.0 1.9 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 ORF38198 - 0.0039 17.2 0.0 0.0076 16.2 0.0 1.6 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF38198 - 0.11 12.9 0.0 0.3 11.4 0.0 1.8 1 1 1 2 2 2 0 Galactose oxidase, central domain ANAPC4_WD40 PF12894.7 ORF37642 - 0.0005 20.3 0.5 0.021 15.1 0.0 2.7 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF37642 - 0.0017 19.2 4.3 0.91 10.5 0.1 3.4 2 1 1 3 3 3 2 WD domain, G-beta repeat Nucleoporin_N PF08801.11 ORF37642 - 0.0023 16.7 0.0 0.0027 16.5 0.0 1.1 1 0 0 1 1 1 1 Nup133 N terminal like Alba PF01918.21 ORF36703 - 1.7e-06 27.8 0.0 3e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Alba ATP-synt_8 PF00895.20 ORF36224 - 0.7 10.4 7.1 3.1 8.3 0.7 2.6 2 1 0 2 2 2 0 ATP synthase protein 8 EF-hand_6 PF13405.6 ORF35919 - 0.0085 16.0 3.1 0.014 15.3 0.3 2.6 3 0 0 3 3 3 1 EF-hand domain HEPPP_synt_1 PF07307.11 ORF35919 - 0.018 14.7 1.7 0.021 14.4 1.7 1.1 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 SPOR PF05036.13 ORF35919 - 0.02 15.3 0.2 0.033 14.6 0.2 1.3 1 0 0 1 1 1 0 Sporulation related domain YpjP PF14005.6 ORF35919 - 0.031 14.3 1.1 0.04 14.0 1.1 1.1 1 0 0 1 1 1 0 YpjP-like protein EF-hand_1 PF00036.32 ORF35919 - 0.032 13.8 0.9 0.25 11.0 0.3 2.4 2 0 0 2 2 2 0 EF hand NTase_sub_bind PF08780.11 ORF35919 - 0.057 13.4 1.2 0.15 12.0 1.2 1.6 1 1 1 2 2 2 0 Nucleotidyltransferase substrate binding protein like ABC_transp_aux PF09822.9 ORF35919 - 0.079 12.4 3.6 0.2 11.1 0.7 2.0 1 1 1 2 2 2 0 ABC-type uncharacterized transport system EF-hand_7 PF13499.6 ORF35919 - 0.13 12.7 1.3 0.29 11.6 0.1 2.1 2 1 0 2 2 2 0 EF-hand domain pair Alba PF01918.21 ORF35808 - 1.7e-06 27.8 0.0 3e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Alba CPBP PF02517.16 ORF35075 - 0.076 13.4 1.1 0.11 12.9 1.1 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease Tubulin PF00091.25 ORF35064 - 0.044 14.0 0.1 0.066 13.4 0.1 1.3 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain Pro_3_hydrox_C PF05373.11 ORF35064 - 0.069 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 L-proline 3-hydroxylase, C-terminal EF-hand_8 PF13833.6 ORF34179 - 0.00014 21.6 0.0 0.00024 20.9 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF34179 - 0.033 14.1 0.0 0.067 13.1 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 ORF34179 - 0.065 12.8 0.1 0.13 11.9 0.1 1.6 1 0 0 1 1 1 0 EF hand EF-hand_7 PF13499.6 ORF34179 - 0.083 13.4 0.0 0.14 12.6 0.0 1.3 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF34179 - 0.1 12.2 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 EF hand Tudor_FRX1 PF18336.1 ORF34043 - 0.0087 16.0 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 1 Fragile X mental retardation Tudor domain SspH PF08141.12 ORF34043 - 0.11 12.6 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Small acid-soluble spore protein H family CPBP PF02517.16 ORF33295 - 0.076 13.4 1.1 0.11 12.9 1.1 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease Interfer-bind PF09294.10 ORF32414 - 0.019 15.3 0.7 0.41 11.0 0.8 2.1 2 0 0 2 2 2 0 Interferon-alpha/beta receptor, fibronectin type III Glycos_transf_1 PF00534.20 ORF31829 - 2.7e-14 53.1 0.0 3.5e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF31829 - 1.4e-08 35.2 0.1 2.1e-08 34.7 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF31829 - 2.2e-08 34.4 0.2 2.9e-08 34.0 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Peptidase_M22 PF00814.25 ORF31829 - 0.095 12.4 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Glycoprotease family Pkinase_Tyr PF07714.17 ORF31294 - 0.0057 16.0 0.0 0.0073 15.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DAGK_acc PF00609.19 ORF31189 - 1.1e-05 25.8 0.0 1.8e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain GATase_5 PF13507.6 ORF3107 - 0.093 11.8 0.1 0.13 11.3 0.1 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Na_Ca_ex PF01699.24 ORF30537 - 1.3e-16 61.0 7.4 1.3e-16 60.9 7.4 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein CDH-cyt PF16010.5 ORF30466 - 0.016 14.9 0.6 0.019 14.6 0.6 1.1 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase LysR_substrate PF03466.20 ORF29272 - 1.2e-09 37.8 0.0 1.8e-09 37.3 0.0 1.3 1 1 0 1 1 1 1 LysR substrate binding domain Arg_decarbox_C PF17944.1 ORF29272 - 0.0083 16.7 0.8 0.015 15.8 0.8 1.3 1 0 0 1 1 1 1 Arginine decarboxylase C-terminal helical extension DUF3313 PF11769.8 ORF28110 - 1.7e-31 109.5 0.2 1.8e-31 109.4 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3313) LCE PF14672.6 ORF27618 - 3.1 8.5 19.7 1.3e+02 3.3 19.6 2.3 1 1 0 1 1 1 0 Late cornified envelope PSI_PsaE PF02427.17 ORF2712 - 0.0059 16.3 0.1 0.018 14.7 0.1 1.8 2 0 0 2 2 2 1 Photosystem I reaction centre subunit IV / PsaE Pex14_N PF04695.13 ORF27114 - 0.23 12.1 3.1 0.27 11.9 3.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region IL28A PF15177.6 ORF26366 - 0.053 13.4 4.8 0.074 12.9 4.8 1.2 1 0 0 1 1 1 0 Interleukin-28A SYCP2_ARLD PF18581.1 ORF25596 - 0.0063 16.5 0.4 0.0085 16.1 0.4 1.2 1 0 0 1 1 1 1 Synaptonemal complex 2 armadillo-repeat-like domain TTL PF03133.15 ORF25466 - 1.1e-25 90.3 0.2 1.3e-25 90.2 0.2 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family IgG_binding_B PF01378.17 ORF25316 - 0.23 11.5 1.3 0.29 11.2 0.1 1.7 2 0 0 2 2 2 0 B domain FtsX PF02687.21 ORF24390 - 0.22 12.0 7.8 0.36 11.3 7.8 1.4 1 0 0 1 1 1 0 FtsX-like permease family CLN3 PF02487.17 ORF22987 - 8.8e-16 57.9 0.1 1e-15 57.7 0.1 1.1 1 0 0 1 1 1 1 CLN3 protein MFS_1 PF07690.16 ORF22987 - 0.014 14.4 1.5 0.016 14.1 1.5 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily EF-hand_6 PF13405.6 ORF22543 - 0.0085 16.0 3.1 0.014 15.3 0.3 2.6 3 0 0 3 3 3 1 EF-hand domain HEPPP_synt_1 PF07307.11 ORF22543 - 0.018 14.7 1.7 0.021 14.4 1.7 1.1 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 SPOR PF05036.13 ORF22543 - 0.02 15.3 0.2 0.033 14.6 0.2 1.3 1 0 0 1 1 1 0 Sporulation related domain YpjP PF14005.6 ORF22543 - 0.031 14.3 1.1 0.04 14.0 1.1 1.1 1 0 0 1 1 1 0 YpjP-like protein EF-hand_1 PF00036.32 ORF22543 - 0.032 13.8 0.9 0.25 11.0 0.3 2.4 2 0 0 2 2 2 0 EF hand NTase_sub_bind PF08780.11 ORF22543 - 0.057 13.4 1.2 0.15 12.0 1.2 1.6 1 1 1 2 2 2 0 Nucleotidyltransferase substrate binding protein like ABC_transp_aux PF09822.9 ORF22543 - 0.079 12.4 3.6 0.2 11.1 0.7 2.0 1 1 1 2 2 2 0 ABC-type uncharacterized transport system EF-hand_7 PF13499.6 ORF22543 - 0.13 12.7 1.3 0.29 11.6 0.1 2.1 2 1 0 2 2 2 0 EF-hand domain pair LptF_LptG PF03739.14 ORF21881 - 0.021 13.7 0.0 0.026 13.4 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG OATP PF03137.20 ORF21881 - 0.023 13.0 0.0 0.026 12.8 0.0 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Amnionless PF14828.6 ORF21881 - 0.03 13.2 0.0 0.033 13.0 0.0 1.0 1 0 0 1 1 1 0 Amnionless DUF2621 PF11084.8 ORF21881 - 0.12 12.4 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2621) DUF948 PF06103.11 ORF21881 - 0.31 11.3 2.4 0.54 10.6 2.4 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) FluMu_N PF17891.1 ORF21298 - 0.079 12.7 0.1 0.16 11.7 0.1 1.5 1 0 0 1 1 1 0 Mu-like prophage FluMu N-terminal domain EF_TS PF00889.19 ORF20490 - 1.4e-07 31.3 0.0 1.7e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Elongation factor TS vATP-synt_E PF01991.18 ORF20395 - 1.2e-19 70.5 13.7 1.3e-19 70.4 13.7 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit T3SS_HrpK1 PF16937.5 ORF20395 - 0.017 14.8 0.0 0.02 14.6 0.0 1.1 1 0 0 1 1 1 0 Type III secretion system translocator protein, HrpF CTNNBL PF08216.11 ORF20395 - 0.53 10.5 5.0 0.41 10.8 2.0 2.0 1 1 1 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear DAGK_acc PF00609.19 ORF19935 - 1.1e-05 25.8 0.0 1.8e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain HalX PF08663.10 ORF19589 - 0.0046 17.2 1.1 0.0083 16.4 1.1 1.5 1 0 0 1 1 1 1 HalX domain Transglut_core PF01841.19 ORF18515 - 0.037 14.5 0.0 0.039 14.4 0.0 1.3 1 0 0 1 1 1 0 Transglutaminase-like superfamily Haemagg_act PF05860.13 ORF17634 - 0.079 12.8 1.0 0.12 12.2 0.3 1.6 2 0 0 2 2 2 0 haemagglutination activity domain Sugar_tr PF00083.24 ORF17585 - 1.1e-05 24.6 7.9 1.3e-05 24.3 7.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter EIID-AGA PF03613.14 ORF17585 - 0.014 14.6 2.2 0.011 14.9 1.2 1.4 1 1 0 1 1 1 0 PTS system mannose/fructose/sorbose family IID component MFS_1 PF07690.16 ORF17585 - 0.27 10.1 11.9 0.46 9.3 11.5 1.4 1 1 0 1 1 1 0 Major Facilitator Superfamily Neuropeptide_S PF14993.6 ORF17162 - 1.5e-05 24.7 0.2 0.21 11.4 0.0 2.3 2 0 0 2 2 2 2 Neuropeptide S precursor protein Cutinase PF01083.22 ORF17162 - 0.025 14.5 1.6 0.61 10.0 0.3 2.0 1 1 1 2 2 2 0 Cutinase DAO PF01266.24 ORF16681 - 1.1e-12 48.3 0.0 1.2e-12 48.1 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase CheR PF01739.18 ORF16544 - 0.09 12.2 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 CheR methyltransferase, SAM binding domain Arrestin_N PF00339.29 ORF15748 - 4e-12 46.4 0.0 4.6e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Rgp1 PF08737.10 ORF15748 - 0.033 13.4 0.0 3.1 6.9 0.0 2.0 2 0 0 2 2 2 0 Rgp1 Condensin2nSMC PF12422.8 ORF15150 - 0.12 12.5 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Condensin II non structural maintenance of chromosomes subunit TPR_7 PF13176.6 ORF14667 - 0.00039 20.2 0.6 0.0027 17.6 0.4 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF14667 - 0.00057 20.1 0.5 0.0015 18.8 0.2 1.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF14667 - 0.005 16.8 3.8 1.2 9.5 0.1 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat SNAP PF14938.6 ORF14667 - 0.012 15.0 1.1 0.015 14.8 0.6 1.3 1 1 0 1 1 1 0 Soluble NSF attachment protein, SNAP TPR_8 PF13181.6 ORF14667 - 0.089 13.1 0.4 0.089 13.1 0.4 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF14667 - 0.28 11.1 0.2 0.28 11.1 0.2 3.1 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF1887 PF09002.11 ORF14314 - 0.15 10.7 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) DAGK_prokar PF01219.19 ORF12762 - 1.8e-35 120.8 7.7 2.1e-35 120.6 7.7 1.0 1 0 0 1 1 1 1 Prokaryotic diacylglycerol kinase YbgT_YccB PF08173.11 ORF12762 - 0.74 10.0 8.1 0.63 10.2 0.5 2.8 2 0 0 2 2 2 0 Membrane bound YbgT-like protein DUF2976 PF11190.8 ORF12762 - 6.2 6.7 10.7 1.6 8.6 3.7 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) zf-CCCH PF00642.24 ORF12439 - 3.1e-09 36.5 1.0 3.1e-09 36.5 1.0 1.9 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF12439 - 1.9e-05 24.5 2.9 1.9e-05 24.5 2.9 1.7 2 0 0 2 2 2 1 Zinc finger domain zf-CCCH_4 PF18044.1 ORF12439 - 4.4e-05 23.2 0.8 7.8e-05 22.4 0.8 1.4 1 0 0 1 1 1 1 CCCH-type zinc finger DUF2570 PF10828.8 ORF12439 - 0.014 15.2 1.9 0.014 15.2 1.9 1.7 1 1 0 2 2 2 0 Protein of unknown function (DUF2570) Trehalose_PPase PF02358.16 ORF12439 - 0.029 13.5 0.7 0.032 13.4 0.7 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase zf-CCCH_2 PF14608.6 ORF12439 - 0.1 13.1 0.6 0.1 13.1 0.6 1.5 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Lyase_aromatic PF00221.19 ORF12439 - 0.22 10.1 0.0 0.26 9.9 0.0 1.1 1 0 0 1 1 1 0 Aromatic amino acid lyase Glucosaminidase PF01832.20 ORF111386 - 5.9e-15 55.5 0.8 7.3e-15 55.2 0.8 1.1 1 0 0 1 1 1 1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DUF4912 PF16258.5 ORF110649 - 0.043 14.0 0.7 0.26 11.5 0.1 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4912) LepA_C PF06421.12 ORF110649 - 3.3 7.9 7.0 3.7 7.7 0.1 2.1 1 1 1 2 2 2 0 GTP-binding protein LepA C-terminus MFMR_assoc PF16596.5 ORF110597 - 0.053 14.0 0.9 0.063 13.7 0.9 1.1 1 0 0 1 1 1 0 Disordered region downstream of MFMR DUF5539 PF17693.1 ORF110597 - 0.08 12.6 4.4 0.096 12.3 4.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5539) PA-IL PF07828.12 ORF110405 - 0.16 11.9 0.0 0.29 11.2 0.0 1.4 1 1 0 1 1 1 0 PA-IL-like protein Cyclin_N PF00134.23 ORF110231 - 6.6e-44 148.7 1.9 7.6e-44 148.5 1.9 1.0 1 0 0 1 1 1 1 Cyclin, N-terminal domain DUF4202 PF13875.6 ORF108825 - 0.054 13.4 0.2 5.3 6.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4202) DHHC PF01529.20 ORF106895 - 0.046 13.8 1.0 0.046 13.8 1.0 2.3 2 1 0 2 2 2 0 DHHC palmitoyltransferase FolB PF02152.18 ORF106879 - 6.6e-32 110.4 0.4 7.3e-32 110.2 0.4 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase DUF2866 PF11065.8 ORF106879 - 0.038 14.0 0.0 0.065 13.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2866) Gsf2 PF11055.8 ORF106364 - 0.11 11.3 0.3 0.11 11.3 0.3 1.1 1 0 0 1 1 1 0 Glucose signalling factor 2 Peptidase_S9 PF00326.21 ORF105702 - 0.00014 21.4 0.0 0.00016 21.2 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Chlorophyllase2 PF12740.7 ORF105702 - 0.061 12.2 0.0 0.072 12.0 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase enzyme Sulfate_transp PF00916.20 ORF10537 - 2.9e-05 23.0 1.4 3.8e-05 22.6 1.4 1.2 1 0 0 1 1 1 1 Sulfate permease family DUF417 PF04224.12 ORF10537 - 0.16 11.5 0.5 0.18 11.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF417 CPBP PF02517.16 ORF105308 - 0.076 13.4 1.1 0.11 12.9 1.1 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease Rv2175c_C PF18367.1 ORF104247 - 0.095 12.8 0.1 0.24 11.5 0.1 1.6 1 0 0 1 1 1 0 Rv2175c C-terminal domain of unknown function DUF5549 PF17703.1 ORF104247 - 0.85 9.3 7.5 0.82 9.3 7.3 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5549) Sh_2 PF17512.2 ORF103549 - 0.061 13.1 0.3 0.081 12.7 0.3 1.2 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein CAP_N PF01213.19 ORF102743 - 3 7.3 6.1 3.5 7.0 6.1 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF1180 PF06679.12 ORF102743 - 3.1 8.2 7.0 4.4 7.7 7.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) ANAPC4_WD40 PF12894.7 ORF101710 - 0.0005 20.3 0.5 0.021 15.1 0.0 2.7 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF101710 - 0.0017 19.2 4.3 0.91 10.5 0.1 3.4 2 1 1 3 3 3 2 WD domain, G-beta repeat Nucleoporin_N PF08801.11 ORF101710 - 0.0023 16.7 0.0 0.0027 16.5 0.0 1.1 1 0 0 1 1 1 1 Nup133 N terminal like PknH_C PF14032.6 ORF101161 - 0.04 13.8 0.2 0.051 13.4 0.2 1.1 1 0 0 1 1 1 0 PknH-like extracellular domain Ehrlichia_rpt PF09528.10 ORF100815 - 0.029 13.8 4.4 0.064 12.7 4.4 1.5 1 0 0 1 1 1 0 Ehrlichia tandem repeat (Ehrlichia_rpt) Jnk-SapK_ap_N PF09744.9 ORF100815 - 0.058 13.6 11.8 0.044 14.0 10.6 1.5 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 ASL_C PF08328.11 ORF100815 - 0.21 11.7 4.9 0.32 11.1 4.9 1.3 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal DUF5401 PF17380.2 ORF100815 - 0.41 8.7 9.6 0.44 8.6 9.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF1706 PF08020.11 ORF100815 - 0.66 9.9 7.0 0.25 11.2 1.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1706) TMPIT PF07851.13 ORF100815 - 3.8 6.7 9.3 4.2 6.5 9.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein PHO4 PF01384.20 NODE_50754_length_361_cov_1.472393_g42849_i0forward_frame_1 - 1.6e-20 73.4 10.2 1.6e-19 70.2 10.2 1.9 1 1 0 1 1 1 1 Phosphate transporter family HemY_N PF07219.13 NODE_50754_length_361_cov_1.472393_g42849_i0forward_frame_1 - 0.0014 18.8 0.3 0.035 14.3 0.0 2.1 2 0 0 2 2 2 1 HemY protein N-terminus DUF1240 PF06836.12 NODE_50754_length_361_cov_1.472393_g42849_i0forward_frame_1 - 0.091 13.3 3.9 0.062 13.8 2.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1240) DUF4514 PF14986.6 NODE_50754_length_361_cov_1.472393_g42849_i0forward_frame_1 - 0.58 10.2 2.1 3.9 7.5 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4514) Rpr2 PF04032.16 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_1 - 5.7 7.3 7.4 17 5.7 7.4 1.7 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF5326 PF17260.2 NODE_50741_length_361_cov_2.239264_g42836_i0reverse_frame_1 - 0.049 13.8 0.0 0.08 13.1 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5326) zf-dskA_traR PF01258.17 NODE_50741_length_361_cov_2.239264_g42836_i0forward_frame_1 - 2.3e-08 33.8 9.7 4.6e-08 32.9 9.7 1.5 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger C1_1 PF00130.22 NODE_50741_length_361_cov_2.239264_g42836_i0forward_frame_1 - 0.41 10.6 9.1 0.14 12.1 4.7 2.3 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) YhfH PF14149.6 NODE_50741_length_361_cov_2.239264_g42836_i0forward_frame_1 - 1.2 9.1 10.7 45 4.1 8.2 3.2 2 1 1 3 3 3 0 YhfH-like protein TetR_C_37 PF18665.1 NODE_50740_length_361_cov_2.337423_g42835_i0reverse_frame_1 - 0.087 13.4 0.1 0.11 13.1 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain AAA_16 PF13191.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.0026 18.2 0.0 0.0035 17.7 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.0049 17.4 0.0 0.0049 17.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.006 16.8 0.1 0.0062 16.8 0.1 1.3 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.0062 17.0 0.0 0.0077 16.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_33 PF13671.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.015 15.5 0.1 0.016 15.3 0.1 1.3 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.022 15.1 0.2 0.022 15.1 0.2 1.3 1 1 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.042 13.2 0.1 0.048 13.0 0.1 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family ATP_bind_1 PF03029.17 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.047 13.5 0.1 0.065 13.0 0.1 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.054 13.9 0.0 0.075 13.4 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Thymidylate_kin PF02223.17 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.058 13.1 0.1 0.065 12.9 0.1 1.5 1 1 0 1 1 1 0 Thymidylate kinase Dynamin_N PF00350.23 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.065 13.3 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Dynamin family AAA_17 PF13207.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.072 13.5 0.2 0.093 13.1 0.2 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.075 12.8 0.1 0.076 12.7 0.1 1.1 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.082 12.7 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.098 11.9 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin GTP_EFTU PF00009.27 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.1 12.2 0.1 0.12 11.9 0.1 1.2 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_28 PF13521.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.11 12.8 0.2 0.11 12.7 0.2 1.5 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.11 11.4 0.0 0.15 10.9 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain PRK PF00485.18 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.18 11.5 0.1 0.2 11.4 0.1 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family KTI12 PF08433.10 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.23 10.9 0.1 0.26 10.7 0.1 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Glucosamine_iso PF01182.20 NODE_50735_length_361_cov_2.754601_g42830_i0forward_frame_1 - 5.9e-08 32.9 0.0 6.6e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Peptidase_M57 PF12388.8 NODE_50735_length_361_cov_2.754601_g42830_i0forward_frame_1 - 0.052 13.2 0.0 0.058 13.0 0.0 1.1 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase DUF2838 PF10998.8 NODE_50732_length_361_cov_3.012270_g42827_i0forward_frame_1 - 0.071 13.4 0.8 0.088 13.1 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) Hep_core_N PF08290.11 NODE_50731_length_361_cov_3.116564_g42826_i0reverse_frame_1 - 0.094 12.7 0.8 0.094 12.7 0.8 3.8 3 1 1 4 4 4 0 Hepatitis core protein, putative zinc finger Nse4_C PF08743.10 NODE_50724_length_361_cov_24.739264_g42819_i0reverse_frame_1 - 0.04 14.2 0.4 0.062 13.6 0.3 1.4 1 1 0 1 1 1 0 Nse4 C-terminal Fer4_21 PF14697.6 NODE_50724_length_361_cov_24.739264_g42819_i0forward_frame_1 - 0.11 12.6 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain Tmemb_9 PF05434.11 NODE_50720_length_361_cov_50.052147_g42815_i0reverse_frame_1 - 4.3 7.2 7.1 3.4 7.5 0.4 2.1 2 0 0 2 2 2 0 TMEM9 YMF19 PF02326.15 NODE_50720_length_361_cov_50.052147_g42815_i0forward_frame_1 - 0.023 15.5 1.9 0.023 15.5 1.9 1.7 2 0 0 2 2 2 0 Plant ATP synthase F0 SOCS_box PF07525.16 NODE_50707_length_361_cov_78.147239_g42802_i0forward_frame_1 - 0.063 13.7 0.1 0.063 13.7 0.1 1.5 2 0 0 2 2 2 0 SOCS box YqfD PF06898.11 NODE_50706_length_361_cov_78.226994_g42801_i0reverse_frame_1 - 0.54 9.0 3.0 0.71 8.7 2.9 1.2 1 1 0 1 1 1 0 Putative stage IV sporulation protein YqfD T2SSC PF11356.8 NODE_50705_length_361_cov_80.223926_g42800_i0reverse_frame_1 - 0.03 14.2 0.2 0.047 13.6 0.1 1.4 1 1 0 1 1 1 0 Type II secretion system protein C Atrophin-1 PF03154.15 NODE_50698_length_361_cov_111.822086_g42793_i0reverse_frame_1 - 2.1 6.5 7.9 2.5 6.3 7.9 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF1967 PF09269.11 NODE_50695_length_361_cov_122.395706_g42790_i0forward_frame_1 - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) fn2 PF00040.19 NODE_50689_length_361_cov_186.015337_g42784_i0forward_frame_1 - 0.067 13.5 2.6 0.15 12.4 2.6 1.5 1 0 0 1 1 1 0 Fibronectin type II domain TerB_N PF13208.6 NODE_50688_length_361_cov_193.365031_g42783_i0forward_frame_1 - 0.17 11.6 0.1 0.21 11.3 0.1 1.2 1 0 0 1 1 1 0 TerB N-terminal domain DUF1981 PF09324.10 NODE_50671_length_362_cov_1.308869_g42767_i0forward_frame_1 - 0.038 13.8 1.0 1.8 8.4 0.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1981) BssS PF13991.6 NODE_50670_length_362_cov_1.636086_g42766_i0reverse_frame_1 - 0.017 15.2 0.0 1.5 9.0 0.0 2.2 2 0 0 2 2 2 0 BssS protein family DUF2227 PF09988.9 NODE_50670_length_362_cov_1.636086_g42766_i0forward_frame_1 - 0.0041 17.0 0.3 0.0055 16.6 0.3 1.3 1 0 0 1 1 1 1 Uncharacterized metal-binding protein (DUF2227) E2F_TDP PF02319.20 NODE_50669_length_362_cov_1.703364_g42765_i0reverse_frame_1 - 4.1e-19 68.4 0.9 6.8e-19 67.7 0.9 1.4 1 0 0 1 1 1 1 E2F/DP family winged-helix DNA-binding domain B-block_TFIIIC PF04182.12 NODE_50669_length_362_cov_1.703364_g42765_i0reverse_frame_1 - 0.0014 18.7 0.2 0.0021 18.2 0.2 1.3 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC TrmB PF01978.19 NODE_50669_length_362_cov_1.703364_g42765_i0reverse_frame_1 - 0.012 15.5 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB RBD-FIP PF09457.10 NODE_50654_length_362_cov_2.443425_g42750_i0reverse_frame_1 - 0.06 13.3 0.0 0.19 11.7 0.0 1.8 1 1 0 1 1 1 0 FIP domain HOK_GEF PF01848.16 NODE_50653_length_362_cov_2.495413_g42749_i0reverse_frame_1 - 1.4e-20 72.4 3.4 1.8e-20 72.0 3.4 1.2 1 0 0 1 1 1 1 Hok/gef family JIP_LZII PF16471.5 NODE_50648_length_362_cov_2.792049_g42744_i0reverse_frame_1 - 0.03 14.5 0.4 0.03 14.5 0.4 2.3 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II YtxH PF12732.7 NODE_50648_length_362_cov_2.792049_g42744_i0reverse_frame_1 - 0.19 12.3 2.0 11 6.6 0.1 2.3 1 1 1 2 2 2 0 YtxH-like protein zf-C3H2C3 PF17122.5 NODE_50643_length_362_cov_19.868502_g42739_i0forward_frame_1 - 0.4 10.8 4.7 0.8 9.8 4.7 1.6 1 0 0 1 1 1 0 Zinc-finger Collagen PF01391.18 NODE_50642_length_362_cov_34.073394_g42738_i0reverse_frame_1 - 0.094 12.5 20.1 0.22 11.3 8.3 2.4 2 0 0 2 2 2 0 Collagen triple helix repeat (20 copies) Retinal PF15449.6 NODE_50642_length_362_cov_34.073394_g42738_i0forward_frame_1 - 1.9 6.2 7.6 2 6.1 7.6 1.0 1 0 0 1 1 1 0 Retinal protein zf-H2C2_2 PF13465.6 NODE_50635_length_362_cov_58.804281_g42731_i0reverse_frame_1 - 0.097 13.1 1.8 8.1 7.1 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain SKA2 PF16740.5 NODE_50632_length_362_cov_76.235474_g42728_i0forward_frame_1 - 0.023 14.5 1.5 0.033 14.0 1.5 1.2 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 AviRa PF11599.8 NODE_50631_length_362_cov_81.669725_g42727_i0forward_frame_1 - 0.034 13.6 0.3 0.054 13.0 0.2 1.3 1 1 0 1 1 1 0 RRNA methyltransferase AviRa LSM PF01423.22 NODE_50614_length_362_cov_290.932722_g42710_i0forward_frame_1 - 0.0099 15.5 0.1 0.014 15.1 0.1 1.2 1 0 0 1 1 1 1 LSM domain Adeno_E3_15_3 PF03307.14 NODE_50611_length_362_cov_339.321101_g42707_i0reverse_frame_1 - 0.065 13.2 0.7 0.095 12.7 0.7 1.2 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region Peptidase_C13 PF01650.18 NODE_50604_length_362_cov_7796.171254_g42700_i0forward_frame_1 - 3e-38 131.8 1.1 3.2e-38 131.7 1.1 1.0 1 0 0 1 1 1 1 Peptidase C13 family Homoserine_dh PF00742.19 NODE_50595_length_363_cov_1.963415_g42691_i0forward_frame_1 - 0.013 15.5 0.0 0.015 15.2 0.0 1.0 1 0 0 1 1 1 0 Homoserine dehydrogenase Nop53 PF07767.11 NODE_50591_length_363_cov_2.024390_g42687_i0reverse_frame_1 - 0.0068 15.8 1.5 0.0085 15.5 1.5 1.1 1 0 0 1 1 1 1 Nop53 (60S ribosomal biogenesis) DNA_PPF PF02916.15 NODE_50591_length_363_cov_2.024390_g42687_i0reverse_frame_1 - 0.035 14.5 0.6 0.054 13.9 0.6 1.2 1 0 0 1 1 1 0 DNA polymerase processivity factor Glycos_transf_3 PF00591.21 NODE_50587_length_363_cov_2.073171_g42683_i0reverse_frame_1 - 1.6e-33 116.4 0.6 1.8e-33 116.2 0.6 1.0 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain PHBC_N PF12551.8 NODE_50578_length_363_cov_2.500000_g42674_i0forward_frame_1 - 0.11 12.3 0.4 0.19 11.5 0.4 1.4 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase N terminal DUF1449 PF07290.11 NODE_50573_length_363_cov_2.750000_g42669_i0forward_frame_1 - 1.8e-30 106.1 0.0 2e-30 106.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1449) Tetraspanin PF00335.20 NODE_50573_length_363_cov_2.750000_g42669_i0forward_frame_1 - 0.017 14.9 0.1 0.017 14.9 0.1 1.1 1 0 0 1 1 1 0 Tetraspanin family UCH PF00443.29 NODE_50572_length_363_cov_2.762195_g42668_i0forward_frame_1 - 0.019 14.5 0.1 0.02 14.4 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Ac76 PF05814.11 NODE_50566_length_363_cov_37.673780_g42662_i0reverse_frame_1 - 0.0024 17.9 0.3 0.0037 17.2 0.3 1.4 1 0 0 1 1 1 1 Orf76 (Ac76) Bunya_G2 PF03563.13 NODE_50564_length_363_cov_44.082317_g42660_i0forward_frame_1 - 0.056 12.7 5.2 0.063 12.5 5.2 1.1 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 TMEM154 PF15102.6 NODE_50564_length_363_cov_44.082317_g42660_i0forward_frame_1 - 0.2 11.6 4.8 0.23 11.4 4.8 1.3 1 0 0 1 1 1 0 TMEM154 protein family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks191.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks191.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks191.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks191.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:00:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LEAP-2 PF07359.11 NODE_50554_length_363_cov_70.015244_g42650_i0reverse_frame_1 - 0.083 12.7 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) DUF1117 PF06547.12 NODE_50553_length_363_cov_70.972561_g42649_i0forward_frame_1 - 0.023 15.2 1.5 0.031 14.8 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) Ribosomal_L13e PF01294.18 NODE_50553_length_363_cov_70.972561_g42649_i0forward_frame_1 - 0.06 13.2 1.4 0.079 12.8 1.4 1.1 1 0 0 1 1 1 0 Ribosomal protein L13e Acetyltransf_10 PF13673.7 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 8.1e-13 48.4 0.0 9.9e-13 48.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 2.7e-11 43.7 0.2 3.6e-11 43.3 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 2e-09 37.7 0.1 2.6e-09 37.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 1.5e-05 25.1 0.0 2.2e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.0018 18.2 0.0 0.0032 17.4 0.0 1.4 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.0022 18.1 0.0 0.0031 17.6 0.0 1.2 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.0046 17.1 0.0 0.0065 16.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltr_2 PF13718.6 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.048 13.1 0.0 0.06 12.7 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase 2 MOZ_SAS PF01853.18 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.16 11.6 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 MOZ/SAS family Acetyltransf_13 PF13880.6 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.2 11.7 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase KTI12 PF08433.10 NODE_50544_length_363_cov_79.682927_g42641_i0forward_frame_1 - 0.0093 15.4 0.4 0.025 14.1 0.2 1.6 1 1 0 2 2 2 1 Chromatin associated protein KTI12 MAP17 PF15807.5 NODE_50544_length_363_cov_79.682927_g42641_i0forward_frame_1 - 0.09 13.0 0.6 0.14 12.4 0.6 1.4 1 1 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 NADH_dehy_S2_C PF06444.11 NODE_50532_length_363_cov_120.966463_g42629_i0forward_frame_1 - 0.0062 17.0 2.8 0.0062 17.0 2.8 2.1 3 0 0 3 3 3 1 NADH dehydrogenase subunit 2 C-terminus FNIP PF05725.12 NODE_50529_length_363_cov_144.868902_g42626_i0reverse_frame_1 - 1.4e-33 114.7 22.7 3.4e-12 46.3 1.0 3.0 1 1 3 4 4 4 4 FNIP Repeat LRR_5 PF13306.6 NODE_50529_length_363_cov_144.868902_g42626_i0reverse_frame_1 - 0.0003 20.7 0.0 0.00054 19.9 0.0 1.4 1 1 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) LRR_11 PF18831.1 NODE_50529_length_363_cov_144.868902_g42626_i0reverse_frame_1 - 1.6 8.4 12.5 23 4.6 0.2 4.5 4 0 0 4 4 4 0 Leucine-rich repeat CIMR PF00878.18 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_1 - 0.067 13.3 0.2 0.1 12.7 0.2 1.3 1 0 0 1 1 1 0 Cation-independent mannose-6-phosphate receptor repeat MIase PF02426.16 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_1 - 0.079 13.1 1.7 1.5 9.0 0.5 2.9 1 1 2 3 3 3 0 Muconolactone delta-isomerase WHIM1 PF15612.6 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_1 - 0.14 11.7 0.6 2.2 7.9 0.1 2.6 2 1 0 2 2 2 0 WSTF, HB1, Itc1p, MBD9 motif 1 Xan_ur_permease PF00860.20 NODE_50518_length_363_cov_566.871951_g42615_i0reverse_frame_1 - 3.3e-16 59.0 0.0 3.8e-16 58.8 0.0 1.0 1 0 0 1 1 1 1 Permease family Ycf66_N PF07444.11 NODE_50510_length_364_cov_1.188450_g42610_i0reverse_frame_2 - 0.0083 16.2 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 Ycf66 protein N-terminus DUF667 PF05018.13 NODE_50510_length_364_cov_1.188450_g42610_i0forward_frame_2 - 1.5e-19 70.5 0.0 2.2e-19 69.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF667) DUF2254 PF10011.9 NODE_50509_length_364_cov_1.270517_g42609_i0reverse_frame_2 - 0.14 11.0 1.0 0.23 10.2 1.0 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Chromate_transp PF02417.15 NODE_50505_length_364_cov_1.544073_g42605_i0reverse_frame_3 - 8.7e-27 94.2 4.9 9.1e-27 94.1 4.9 1.0 1 0 0 1 1 1 1 Chromate transporter Chlam_PMP PF02415.17 NODE_50504_length_364_cov_1.586626_g42604_i0reverse_frame_3 - 0.00093 19.5 5.3 0.0031 17.9 1.5 2.3 2 0 0 2 2 2 1 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Microcin PF03526.13 NODE_50504_length_364_cov_1.586626_g42604_i0reverse_frame_3 - 0.01 15.6 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein DUF5439 PF17507.2 NODE_50504_length_364_cov_1.586626_g42604_i0reverse_frame_3 - 0.056 13.7 1.7 0.095 12.9 1.7 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5439) OTU PF02338.19 NODE_50503_length_364_cov_1.689970_g42603_i0forward_frame_2 - 0.11 13.0 0.2 0.2 12.1 0.2 1.4 1 0 0 1 1 1 0 OTU-like cysteine protease zf-CCHC_4 PF14392.6 NODE_50501_length_364_cov_1.790274_g42601_i0reverse_frame_2 - 0.1 12.3 0.7 0.18 11.6 0.7 1.4 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_6 PF15288.6 NODE_50501_length_364_cov_1.790274_g42601_i0reverse_frame_2 - 0.14 12.0 2.5 0.23 11.4 2.5 1.3 1 0 0 1 1 1 0 Zinc knuckle DUF3446 PF11928.8 NODE_50498_length_364_cov_1.896657_g42598_i0reverse_frame_3 - 1.2 9.5 21.5 1.8 8.9 21.5 1.3 1 0 0 1 1 1 0 Early growth response N-terminal domain AbiEi_4 PF13338.6 NODE_50493_length_364_cov_2.501520_g42593_i0reverse_frame_2 - 0.093 12.9 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin DUF4931 PF16285.5 NODE_50492_length_364_cov_2.537994_g42592_i0forward_frame_2 - 0.062 12.6 0.1 0.079 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4931) Cas_TM1802 PF09484.10 NODE_50490_length_364_cov_2.562310_g42590_i0reverse_frame_3 - 0.0032 16.3 1.7 0.0038 16.0 1.7 1.1 1 0 0 1 1 1 1 CRISPR-associated protein TM1802 (cas_TM1802) AFP_2 PF18815.1 NODE_50490_length_364_cov_2.562310_g42590_i0reverse_frame_2 - 8.8 6.7 8.0 4.9 7.5 2.0 2.4 2 0 0 2 2 2 0 Bacterial antifreeze protein repeat CENP-N PF05238.13 NODE_50488_length_364_cov_2.851064_g42588_i0forward_frame_3 - 0.075 12.3 0.2 0.093 12.0 0.2 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like zf-C3Hc3H PF13891.6 NODE_50485_length_364_cov_3.015198_g42585_i0reverse_frame_3 - 0.51 10.7 7.4 0.78 10.1 1.0 2.4 3 0 0 3 3 3 0 Potential DNA-binding domain Endonuc-BglII PF09195.11 NODE_50484_length_364_cov_3.021277_g42584_i0reverse_frame_3 - 0.1 12.4 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Restriction endonuclease BglII dCache_1 PF02743.18 NODE_50484_length_364_cov_3.021277_g42584_i0reverse_frame_3 - 0.11 12.3 1.9 0.2 11.4 1.9 1.4 1 1 0 1 1 1 0 Cache domain Microcin PF03526.13 NODE_50484_length_364_cov_3.021277_g42584_i0reverse_frame_3 - 0.11 12.3 0.9 0.11 12.3 0.9 1.8 2 0 0 2 2 2 0 Colicin E1 (microcin) immunity protein DUF5389 PF17364.2 NODE_50483_length_364_cov_3.039514_g42583_i0reverse_frame_2 - 0.039 14.0 0.9 0.047 13.7 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5389) zf-C2H2 PF00096.26 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.00048 20.4 1.4 0.89 10.1 0.1 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.0014 18.9 3.7 0.0099 16.3 1.2 2.4 2 0 0 2 2 2 1 Zinc-finger double domain zf-H2C2_5 PF13909.6 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.0017 18.1 0.3 0.02 14.6 0.0 2.4 2 0 0 2 2 2 1 C2H2-type zinc-finger domain HEPN_Apea PF18739.1 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.011 16.2 1.3 0.015 15.7 1.3 1.2 1 0 0 1 1 1 0 Apea-like HEPN Med31 PF05669.12 NODE_50478_length_364_cov_6.118541_g42578_i0forward_frame_2 - 0.0083 16.1 2.0 0.017 15.1 2.1 1.5 1 1 0 1 1 1 1 SOH1 RHD3 PF05879.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 0.059 11.5 1.3 0.064 11.4 1.3 1.0 1 0 0 1 1 1 0 Root hair defective 3 GTP-binding protein (RHD3) CbiQ PF02361.16 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 0.084 12.5 11.2 0.087 12.4 11.2 1.1 1 0 0 1 1 1 0 Cobalt transport protein Wzy_C PF04932.15 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 0.12 12.0 4.8 0.14 11.8 4.8 1.2 1 0 0 1 1 1 0 O-Antigen ligase MFS_1_like PF12832.7 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 0.22 10.3 4.8 0.22 10.3 4.8 1.1 1 0 0 1 1 1 0 MFS_1 like family DUF2207 PF09972.9 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 4.3 6.0 7.7 5.1 5.7 7.7 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phlebovirus_G1 PF07243.11 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 6.8 4.9 5.9 6.9 4.9 5.9 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 DUF2970 PF11174.8 NODE_50476_length_364_cov_7.401216_g42576_i0forward_frame_2 - 0.15 12.0 6.0 4.5 7.2 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2970) DUF2628 PF10947.8 NODE_50476_length_364_cov_7.401216_g42576_i0forward_frame_2 - 6.9 7.1 9.7 9.5 6.6 9.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) DUF4062 PF13271.6 NODE_50474_length_364_cov_10.352584_g42574_i0reverse_frame_3 - 0.075 13.4 0.1 0.089 13.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4062) UBX PF00789.20 NODE_50474_length_364_cov_10.352584_g42574_i0reverse_frame_2 - 5.6e-09 36.1 0.1 7.9e-09 35.6 0.1 1.2 1 0 0 1 1 1 1 UBX domain RL PF17797.1 NODE_50474_length_364_cov_10.352584_g42574_i0reverse_frame_2 - 0.099 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 RL domain RabGAP-TBC PF00566.18 NODE_50471_length_364_cov_12.665653_g42571_i0reverse_frame_3 - 1.2e-05 25.1 1.0 1.2e-05 25.1 1.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain KH_10 PF17905.1 NODE_50471_length_364_cov_12.665653_g42571_i0reverse_frame_3 - 0.066 13.6 0.2 0.094 13.2 0.2 1.3 1 0 0 1 1 1 0 GLD-3 KH domain 5 ABC2_membrane PF01061.24 NODE_50470_length_364_cov_28.550152_g42570_i0forward_frame_2 - 1.2e-10 41.2 0.6 1.2e-10 41.2 0.6 1.5 2 0 0 2 2 2 1 ABC-2 type transporter TraS PF10624.9 NODE_50468_length_364_cov_40.790274_g42568_i0forward_frame_3 - 0.7 9.8 5.3 0.78 9.7 5.3 1.2 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS EFP PF01132.20 NODE_50463_length_364_cov_70.872340_g42563_i0forward_frame_3 - 0.032 14.3 0.1 8 6.6 0.1 2.3 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain POTRA PF07244.15 NODE_50463_length_364_cov_70.872340_g42563_i0forward_frame_3 - 0.11 13.0 2.4 0.14 12.8 0.6 1.9 1 1 1 2 2 2 0 Surface antigen variable number repeat Bac_surface_Ag PF01103.23 NODE_50463_length_364_cov_70.872340_g42563_i0forward_frame_3 - 0.11 11.9 2.3 0.13 11.8 2.3 1.0 1 0 0 1 1 1 0 Surface antigen Vac7 PF12751.7 NODE_50458_length_364_cov_75.808511_g42558_i0reverse_frame_3 - 0.076 12.4 4.8 0.12 11.8 4.8 1.2 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 PseudoU_synth_2 PF00849.22 NODE_50453_length_364_cov_107.158055_g42553_i0reverse_frame_3 - 0.00012 22.2 1.6 0.00018 21.6 1.6 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase EF-hand_1 PF00036.32 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 1.4e-06 27.4 0.2 2.6e-06 26.6 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 2.2e-05 24.2 0.2 3.4e-05 23.6 0.2 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 2.4e-05 24.7 0.1 3.1e-05 24.3 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 0.00016 21.0 0.2 0.0003 20.1 0.2 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 0.0019 18.0 0.1 0.0042 16.9 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain Spo7 PF03907.13 NODE_50451_length_364_cov_111.720365_g42551_i0reverse_frame_3 - 0.039 13.4 0.3 0.056 12.9 0.3 1.5 1 1 0 1 1 1 0 Spo7-like protein Rap_GAP PF02145.15 NODE_50446_length_364_cov_159.115502_g42546_i0forward_frame_3 - 0.14 11.7 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Rap/ran-GAP FH2 PF02181.23 NODE_50445_length_364_cov_168.768997_g42545_i0reverse_frame_2 - 0.12 11.5 0.1 0.14 11.3 0.1 1.0 1 0 0 1 1 1 0 Formin Homology 2 Domain DUF1071 PF06378.11 NODE_50440_length_364_cov_3974.787234_g42540_i0forward_frame_3 - 0.12 11.9 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) Rimk_N PF18030.1 NODE_50437_length_365_cov_1.609091_g42537_i0reverse_frame_3 - 0.079 13.4 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 RimK PreATP-grasp domain PHM7_ext PF12621.8 NODE_50437_length_365_cov_1.609091_g42537_i0reverse_frame_3 - 0.1 12.7 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Extracellular tail, of 10TM putative phosphate transporter RGS PF00615.19 NODE_50435_length_365_cov_1.778788_g42535_i0reverse_frame_2 - 0.078 13.3 3.9 0.1 12.9 3.9 1.2 1 0 0 1 1 1 0 Regulator of G protein signaling domain BNIP2 PF12496.8 NODE_50435_length_365_cov_1.778788_g42535_i0reverse_frame_2 - 0.1 13.0 0.6 0.12 12.8 0.6 1.1 1 0 0 1 1 1 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 Pkinase PF00069.25 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 1.3e-28 100.1 0.0 1.4e-28 100.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 4.8e-10 39.2 0.0 5.3e-10 39.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 0.006 15.9 0.0 0.0075 15.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 0.031 14.2 0.1 0.041 13.8 0.1 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 0.1 11.3 0.0 0.11 11.3 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Kdo PF06293.14 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 0.16 11.3 0.1 0.22 10.9 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Collagen_mid PF15984.5 NODE_50428_length_365_cov_2.030303_g42528_i0forward_frame_3 - 0.22 11.2 0.4 0.36 10.6 0.4 1.2 1 0 0 1 1 1 0 Bacterial collagen, middle region PH_2 PF08458.10 NODE_50427_length_365_cov_2.048485_g42527_i0forward_frame_2 - 0.022 15.1 0.2 0.042 14.2 0.2 1.4 1 0 0 1 1 1 0 Plant pleckstrin homology-like region Pap_E4 PF02711.14 NODE_50425_length_365_cov_2.087879_g42525_i0reverse_frame_2 - 0.26 12.2 3.3 0.38 11.7 3.3 1.2 1 0 0 1 1 1 0 E4 protein FAM176 PF14851.6 NODE_50424_length_365_cov_2.093939_g42524_i0forward_frame_3 - 0.0064 16.2 0.1 0.013 15.2 0.0 1.5 1 1 1 2 2 2 1 FAM176 family Podoplanin PF05808.11 NODE_50424_length_365_cov_2.093939_g42524_i0forward_frame_3 - 0.023 14.8 0.4 0.036 14.2 0.0 1.5 2 0 0 2 2 2 0 Podoplanin DUF4834 PF16118.5 NODE_50424_length_365_cov_2.093939_g42524_i0forward_frame_3 - 0.12 13.4 0.2 0.63 11.0 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) GlgS PF08971.11 NODE_50422_length_365_cov_2.312121_g42522_i0reverse_frame_2 - 1.4 9.0 4.9 1.5 8.9 3.2 1.9 1 1 0 1 1 1 0 Glycogen synthesis protein tRNA-synt_1e PF01406.19 NODE_50412_length_365_cov_2.933333_g42512_i0reverse_frame_3 - 3e-27 95.8 2.1 4.2e-27 95.3 2.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain FtsL PF04999.13 NODE_50412_length_365_cov_2.933333_g42512_i0forward_frame_2 - 0.35 10.9 4.3 0.37 10.8 1.1 2.0 2 0 0 2 2 2 0 Cell division protein FtsL Helicase_C_2 PF13307.6 NODE_50411_length_365_cov_2.942424_g42511_i0reverse_frame_3 - 2.7e-13 50.4 0.0 3.2e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Helicase C-terminal domain SSP160 PF06933.11 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_3 - 0.054 11.7 10.8 0.052 11.8 10.8 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 SSP160 PF06933.11 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_2 - 4.9 5.2 23.6 5.8 5.0 23.6 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 RIFIN PF02009.16 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.0013 18.7 0.1 0.0015 18.5 0.1 1.0 1 0 0 1 1 1 1 Rifin Rax2 PF12768.7 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.0034 16.9 4.1 0.0042 16.6 4.1 1.1 1 0 0 1 1 1 1 Cortical protein marker for cell polarity TMEM154 PF15102.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.0035 17.3 1.7 0.005 16.7 1.7 1.2 1 0 0 1 1 1 1 TMEM154 protein family DUF4448 PF14610.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.015 15.1 0.2 0.018 14.8 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) Renin_r PF07850.14 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.03 14.9 0.7 0.039 14.6 0.7 1.2 1 0 0 1 1 1 0 Renin receptor-like protein Apt1 PF10351.9 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.04 12.8 2.1 0.042 12.7 2.1 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Amnionless PF14828.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.065 12.1 2.2 0.071 11.9 2.2 1.1 1 0 0 1 1 1 0 Amnionless LRRC37AB_C PF14914.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.13 12.1 4.3 0.25 11.2 4.3 1.5 1 1 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain DUF4614 PF15391.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 1.1 9.3 11.2 1.3 9.0 11.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) Orf78 PF06024.12 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 1.1 9.6 11.7 3.7 7.9 11.7 1.7 1 1 0 1 1 1 0 Orf78 (ac78) CCDC106 PF15794.5 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 1.2 8.8 6.9 1.5 8.4 6.9 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Shisa PF13908.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 1.5 9.0 13.1 3 8.0 13.0 1.5 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF5383 PF17355.2 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 1.7 9.0 3.6 3.1 8.2 3.6 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5383) SR-25 PF10500.9 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 3.3 7.3 24.7 5 6.7 24.7 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF1180 PF06679.12 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 8.1 6.8 13.8 14 6.0 13.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1180) SID-1_RNA_chan PF13965.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_2 - 0.052 12.0 0.7 0.056 11.9 0.7 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 SR-25 PF10500.9 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_2 - 0.32 10.6 14.6 0.36 10.4 14.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein EphA2_TM PF14575.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_2 - 0.49 11.3 6.6 0.87 10.5 6.6 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain RAP PF08373.10 NODE_50399_length_365_cov_44.927273_g42499_i0forward_frame_3 - 0.027 14.6 0.1 0.055 13.6 0.1 1.6 1 1 0 1 1 1 0 RAP domain Sec62 PF03839.16 NODE_50398_length_365_cov_54.651515_g42498_i0forward_frame_3 - 0.18 11.3 6.2 0.25 10.8 6.2 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 7TM_GPCR_Sru PF10322.9 NODE_50395_length_365_cov_58.463636_g42495_i0reverse_frame_3 - 0.19 11.0 10.4 0.23 10.8 10.4 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru Cu PF17563.2 NODE_50395_length_365_cov_58.463636_g42495_i0forward_frame_3 - 0.049 13.8 0.0 0.1 12.8 0.0 1.5 1 0 0 1 1 1 0 Cupiennin Sod_Ni PF09055.11 NODE_50395_length_365_cov_58.463636_g42495_i0forward_frame_3 - 0.052 14.1 0.1 0.08 13.5 0.1 1.2 1 0 0 1 1 1 0 Nickel-containing superoxide dismutase PARP PF00644.20 NODE_50395_length_365_cov_58.463636_g42495_i0forward_frame_3 - 0.055 13.1 0.3 0.056 13.0 0.3 1.2 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain DUF4215 PF13948.6 NODE_50393_length_365_cov_61.275758_g42493_i0forward_frame_2 - 3.8e-06 27.2 6.4 6.4e-06 26.5 6.4 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4215) RNase_T PF00929.24 NODE_50391_length_365_cov_62.487879_g42491_i0forward_frame_2 - 0.0028 18.2 0.0 0.0038 17.8 0.0 1.2 1 0 0 1 1 1 1 Exonuclease WD40 PF00400.32 NODE_50390_length_365_cov_66.124242_g42490_i0forward_frame_3 - 3.2e-05 24.6 0.3 0.0018 19.0 0.0 2.2 2 0 0 2 2 2 1 WD domain, G-beta repeat BBS2_Mid PF14783.6 NODE_50390_length_365_cov_66.124242_g42490_i0forward_frame_3 - 0.011 15.7 0.1 0.017 15.2 0.1 1.3 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, middle region Sec62 PF03839.16 NODE_50385_length_365_cov_83.575758_g42485_i0reverse_frame_2 - 1.1 8.7 6.7 1.4 8.4 6.7 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Ribosomal_S27 PF01599.19 NODE_50382_length_365_cov_90.121212_g42482_i0reverse_frame_2 - 0.021 15.0 0.5 0.021 15.0 0.5 1.6 2 0 0 2 2 2 0 Ribosomal protein S27a HTS PF04204.16 NODE_50379_length_365_cov_113.842424_g42479_i0reverse_frame_2 - 0.057 12.3 0.4 0.066 12.1 0.4 1.1 1 0 0 1 1 1 0 Homoserine O-succinyltransferase DUF1493 PF07377.12 NODE_50372_length_365_cov_151.924242_g42472_i0reverse_frame_3 - 0.021 15.3 0.1 0.028 14.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) Porin_OmpG_1_2 PF16946.5 NODE_50372_length_365_cov_151.924242_g42472_i0reverse_frame_2 - 0.11 11.8 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 OMPG-porin 1 family B12-binding PF02310.19 NODE_50371_length_365_cov_155.515152_g42471_i0reverse_frame_2 - 5.3e-07 29.7 0.0 7e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 B12 binding domain Aldo_ket_red PF00248.21 NODE_50370_length_365_cov_168.875758_g42470_i0reverse_frame_3 - 5.3e-15 55.4 0.0 6.2e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family LysM PF01476.20 NODE_50370_length_365_cov_168.875758_g42470_i0reverse_frame_3 - 0.038 14.1 0.1 0.64 10.1 0.0 2.2 2 0 0 2 2 2 0 LysM domain EF-hand_1 PF00036.32 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 5.6e-09 34.9 0.6 9.7e-09 34.2 0.6 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 3.8e-07 29.5 0.3 8.1e-07 28.5 0.3 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 5.9e-07 29.8 0.1 1.1e-06 28.9 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 3.8e-06 26.6 0.3 6.2e-06 26.0 0.3 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 5.5e-06 25.6 1.4 1e-05 24.8 1.4 1.4 1 0 0 1 1 1 1 EF hand EF-hand_4 PF12763.7 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 0.021 14.8 0.2 0.043 13.8 0.1 1.4 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EF-hand_14 PF17959.1 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 0.097 13.0 0.2 0.14 12.5 0.2 1.4 1 1 0 1 1 1 0 EF-hand domain EF-hand_10 PF14788.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 0.11 12.4 0.3 0.17 11.8 0.3 1.3 1 0 0 1 1 1 0 EF hand YfdX PF10938.8 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 0.13 12.2 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 YfdX protein EMC3_TMCO1 PF01956.16 NODE_50367_length_365_cov_176.760606_g41919_i1reverse_frame_2 - 0.12 12.1 0.3 6.5 6.4 0.1 2.1 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like DUF2663 PF10864.8 NODE_50367_length_365_cov_176.760606_g41919_i1reverse_frame_2 - 0.12 12.8 2.9 0.16 12.4 2.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2663) PHF5 PF03660.14 NODE_50359_length_365_cov_1056.412121_g42460_i0forward_frame_2 - 1.7e-41 140.6 11.5 2e-41 140.4 11.5 1.1 1 0 0 1 1 1 1 PHF5-like protein zn-ribbon_14 PF16503.5 NODE_50359_length_365_cov_1056.412121_g42460_i0forward_frame_2 - 0.0004 19.8 0.2 0.0004 19.8 0.2 3.0 3 0 0 3 3 3 1 Zinc-ribbon PolC_DP2 PF03833.13 NODE_50359_length_365_cov_1056.412121_g42460_i0forward_frame_2 - 0.45 8.3 4.4 0.44 8.3 4.4 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Mobilization_B PF17511.2 NODE_50353_length_365_cov_6134.848485_g42455_i0forward_frame_2 - 0.032 14.6 0.5 0.045 14.1 0.5 1.2 1 0 0 1 1 1 0 Mobilization protein B Ig_5 PF16681.5 NODE_50345_length_366_cov_2.166163_g42447_i0reverse_frame_3 - 0.017 15.5 1.7 0.028 14.8 1.7 1.3 1 0 0 1 1 1 0 Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain Pkinase PF00069.25 NODE_50343_length_366_cov_2.317221_g42445_i0forward_frame_3 - 0.0066 15.8 0.0 0.0077 15.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50343_length_366_cov_2.317221_g42445_i0forward_frame_3 - 0.13 11.5 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase GerE PF00196.19 NODE_50339_length_366_cov_2.586103_g42441_i0reverse_frame_3 - 9.5e-13 47.5 0.1 1.5e-12 46.9 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 NODE_50339_length_366_cov_2.586103_g42441_i0reverse_frame_3 - 0.001 18.7 0.0 0.0052 16.4 0.0 2.0 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 NODE_50339_length_366_cov_2.586103_g42441_i0reverse_frame_3 - 0.0096 15.5 0.0 0.021 14.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 NODE_50339_length_366_cov_2.586103_g42441_i0reverse_frame_3 - 0.054 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain DUF1581 PF07619.11 NODE_50336_length_366_cov_2.966767_g42438_i0reverse_frame_3 - 0.04 14.0 0.0 0.08 13.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1581) DUF1850 PF08905.11 NODE_50336_length_366_cov_2.966767_g42438_i0forward_frame_2 - 0.14 12.5 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1850) Ta0938 PF11494.8 NODE_50333_length_366_cov_3.549849_g42435_i0forward_frame_3 - 0.059 13.6 0.2 0.088 13.1 0.2 1.3 1 0 0 1 1 1 0 Ta0938 Sporozoite_P67 PF05642.11 NODE_50331_length_366_cov_24.268882_g42433_i0reverse_frame_3 - 0.0062 14.7 5.8 0.0066 14.6 5.8 1.0 1 0 0 1 1 1 1 Sporozoite P67 surface antigen Mucin PF01456.17 NODE_50331_length_366_cov_24.268882_g42433_i0reverse_frame_3 - 0.012 15.7 25.1 0.013 15.5 25.1 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein MGC-24 PF05283.11 NODE_50331_length_366_cov_24.268882_g42433_i0reverse_frame_3 - 1.2 9.6 15.4 1.6 9.2 15.4 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin SSP160 PF06933.11 NODE_50331_length_366_cov_24.268882_g42433_i0reverse_frame_3 - 2.4 6.2 22.7 2.4 6.2 22.7 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF3311 PF11755.8 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 0.016 15.1 3.8 0.034 14.1 3.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3311) TadF PF16964.5 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 0.083 12.6 0.2 0.096 12.4 0.2 1.1 1 0 0 1 1 1 0 Putative tight adherence pilin protein F DUF929 PF06053.11 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 0.19 11.0 1.4 0.2 11.0 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF929) Orf78 PF06024.12 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 0.58 10.5 2.5 0.86 9.9 2.5 1.3 1 0 0 1 1 1 0 Orf78 (ac78) ECSCR PF15820.5 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 1 9.2 11.5 1.6 8.6 11.5 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF2771 PF10969.8 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 1.7 8.7 7.8 3.8 7.5 7.7 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2771) Baculo_11_kDa PF06143.11 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 2.2 7.9 8.0 4.2 7.0 8.0 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family RCR PF12273.8 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 4.2 8.1 5.2 4.9 7.8 5.2 1.4 1 1 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red TMEM154 PF15102.6 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 4.5 7.2 5.7 7.2 6.5 5.7 1.3 1 0 0 1 1 1 0 TMEM154 protein family EphA2_TM PF14575.6 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 5.1 8.1 10.0 6.5 7.7 10.0 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain HemY_N PF07219.13 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 8.6 6.6 6.9 13 6.1 6.9 1.4 1 0 0 1 1 1 0 HemY protein N-terminus RST PF12174.8 NODE_50330_length_366_cov_28.157100_g42432_i0reverse_frame_2 - 0.025 14.5 0.9 0.025 14.5 0.9 1.7 2 0 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain Noggin PF05806.12 NODE_50328_length_366_cov_32.649547_g42430_i0forward_frame_3 - 0.12 12.3 0.1 0.15 11.9 0.1 1.1 1 0 0 1 1 1 0 Noggin Nit_Regul_Hom PF10126.9 NODE_50326_length_366_cov_55.274924_g42428_i0reverse_frame_2 - 0.0077 16.2 0.0 0.015 15.3 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein, homolog of nitrogen regulatory protein PII Trp_DMAT PF11991.8 NODE_50324_length_366_cov_62.483384_g42426_i0reverse_frame_3 - 0.021 14.3 0.2 0.026 13.9 0.2 1.1 1 0 0 1 1 1 0 Tryptophan dimethylallyltransferase PPK2 PF03976.14 NODE_50321_length_366_cov_72.897281_g42423_i0forward_frame_3 - 0.14 11.7 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Polyphosphate kinase 2 (PPK2) AmoC PF04896.12 NODE_50320_length_366_cov_74.595166_g42422_i0reverse_frame_3 - 0.026 13.8 0.3 0.03 13.6 0.3 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C Retrotran_gag_2 PF14223.6 NODE_50315_length_366_cov_87.006042_g42417_i0forward_frame_3 - 0.071 12.8 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type MORN PF02493.20 NODE_50315_length_366_cov_87.006042_g42417_i0forward_frame_2 - 3.1e-08 33.0 9.1 0.00057 19.6 1.8 2.5 3 0 0 3 3 3 2 MORN repeat ANKH PF07260.11 NODE_50314_length_366_cov_87.102719_g42416_i0forward_frame_2 - 0.0017 17.6 0.3 0.0023 17.2 0.3 1.1 1 0 0 1 1 1 1 Progressive ankylosis protein (ANKH) Pho86 PF11124.8 NODE_50314_length_366_cov_87.102719_g42416_i0forward_frame_2 - 0.092 12.2 5.2 0.11 12.0 5.2 1.1 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 SMN PF06003.12 NODE_50312_length_366_cov_91.398792_g42414_i0reverse_frame_2 - 1.3 8.2 4.1 1.6 7.9 4.1 1.1 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) DUF1281 PF06924.11 NODE_50312_length_366_cov_91.398792_g42414_i0forward_frame_2 - 0.082 12.4 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) DUF2633 PF11119.8 NODE_50310_length_366_cov_95.311178_g42412_i0reverse_frame_2 - 0.59 10.1 3.8 1.1 9.2 3.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2633) HEAT PF02985.22 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.00041 20.4 0.7 0.94 9.9 0.3 2.3 2 0 0 2 2 2 2 HEAT repeat Cnd1 PF12717.7 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.0038 17.3 0.0 0.0084 16.2 0.0 1.5 1 1 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Cohesin_HEAT PF12765.7 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.012 15.9 0.3 0.32 11.3 0.0 2.2 2 0 0 2 2 2 0 HEAT repeat associated with sister chromatid cohesion HEAT_2 PF13646.6 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.014 15.7 0.3 0.085 13.3 0.2 1.8 1 1 0 1 1 1 0 HEAT repeats CLASP_N PF12348.8 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.026 14.1 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 CLASP N terminal M11L PF11099.8 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.053 13.8 0.0 1.2 9.4 0.0 2.0 1 1 1 2 2 2 0 Apoptosis regulator M11L like SYCE1 PF15233.6 NODE_50308_length_366_cov_98.546828_g42410_i0forward_frame_2 - 0.012 15.7 24.0 0.016 15.3 24.0 1.3 1 0 0 1 1 1 0 Synaptonemal complex central element protein 1 Toxin_3 PF00537.18 NODE_50306_length_366_cov_104.368580_g42408_i0reverse_frame_2 - 0.046 13.9 0.9 0.075 13.2 0.9 1.3 1 0 0 1 1 1 0 Scorpion toxin-like domain Fip1 PF05182.13 NODE_50304_length_366_cov_108.018127_g42406_i0forward_frame_2 - 0.084 12.4 0.8 0.19 11.3 0.8 1.5 1 0 0 1 1 1 0 Fip1 motif Evr1_Alr PF04777.13 NODE_50303_length_366_cov_117.311178_g42405_i0forward_frame_3 - 0.0028 18.1 0.0 0.0031 18.0 0.0 1.1 1 0 0 1 1 1 1 Erv1 / Alr family tRNA_NucTran2_2 PF13735.6 NODE_50302_length_366_cov_130.323263_g42404_i0reverse_frame_2 - 0.082 12.9 0.0 0.16 12.0 0.0 1.5 1 1 0 1 1 1 0 tRNA nucleotidyltransferase domain 2 putative DUF4460 PF14687.6 NODE_50301_length_366_cov_131.909366_g42403_i0reverse_frame_3 - 0.075 13.1 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) OrfA PF17495.2 NODE_50297_length_366_cov_165.507553_g42399_i0reverse_frame_3 - 0.0012 19.0 2.1 0.0014 18.8 1.2 1.5 2 0 0 2 2 2 1 Vpr-like OrfA RDD PF06271.12 NODE_50297_length_366_cov_165.507553_g42399_i0forward_frame_2 - 1.8 8.7 7.9 3.6 7.8 7.9 1.4 1 1 0 1 1 1 0 RDD family Nup54 PF13874.6 NODE_50293_length_366_cov_199.882175_g42395_i0forward_frame_2 - 0.13 12.4 0.0 0.26 11.4 0.0 1.5 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 RCC1_2 PF13540.6 NODE_50291_length_366_cov_226.936556_g42393_i0reverse_frame_2 - 9.6e-07 28.4 0.1 0.043 13.6 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PTS_2-RNA PF01885.16 NODE_50291_length_366_cov_226.936556_g42393_i0forward_frame_3 - 0.17 11.9 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family DUF2071 PF09844.9 NODE_50291_length_366_cov_226.936556_g42393_i0forward_frame_2 - 0.0096 15.6 1.7 0.011 15.4 1.7 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (COG2071) HXXEE PF13787.6 NODE_50288_length_366_cov_392.410876_g42390_i0forward_frame_3 - 0.11 13.4 1.1 0.14 13.0 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif PSI_PsaH PF03244.14 NODE_50288_length_366_cov_392.410876_g42390_i0forward_frame_2 - 0.36 10.3 0.6 0.49 9.9 0.6 1.2 1 0 0 1 1 1 0 Photosystem I reaction centre subunit VI zf-Tim10_DDP PF02953.15 NODE_50286_length_366_cov_3374.864048_g42388_i0reverse_frame_2 - 2.2e-08 33.6 8.2 2.2e-08 33.6 8.2 2.2 2 0 0 2 2 2 2 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 NODE_50286_length_366_cov_3374.864048_g42388_i0reverse_frame_2 - 0.12 13.0 1.0 0.2 12.3 0.2 1.6 1 1 1 2 2 2 0 Coronavirus non-structural protein NS2 DUF1071 PF06378.11 NODE_50285_length_366_cov_3950.830816_g42387_i0forward_frame_2 - 0.12 11.9 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) Glycolytic PF00274.19 NODE_50284_length_366_cov_5206.045317_g42386_i0reverse_frame_2 - 2.9e-05 23.0 0.2 4.4e-05 22.4 0.2 1.3 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I GST_C PF00043.25 NODE_50282_length_366_cov_16469.746224_g42384_i0reverse_frame_3 - 2.6 8.3 5.3 0.94 9.7 0.4 2.0 1 1 1 2 2 2 0 Glutathione S-transferase, C-terminal domain zf-met PF12874.7 NODE_50282_length_366_cov_16469.746224_g42384_i0forward_frame_3 - 0.3 11.5 2.1 11 6.6 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type NADH_4Fe-4S PF10589.9 ORF99957 - 0.035 14.2 0.7 0.063 13.4 0.7 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DUF1216 PF06746.11 ORF99848 - 0.0013 18.8 1.6 0.0016 18.5 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1216) Mem_trans PF03547.18 ORF99848 - 0.15 10.4 0.4 0.18 10.2 0.4 1.0 1 0 0 1 1 1 0 Membrane transport protein MFS_1 PF07690.16 ORF99798 - 0.0005 19.1 3.4 0.00053 19.0 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PKcGMP_CC PF16808.5 ORF98902 - 0.0066 16.3 13.0 0.15 12.0 4.4 2.7 2 0 0 2 2 2 2 Coiled-coil N-terminus of cGMP-dependent protein kinase SHE3 PF17078.5 ORF98902 - 0.0067 16.2 15.2 0.0075 16.0 15.2 1.1 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 MitMem_reg PF13012.6 ORF98902 - 0.082 13.3 2.6 0.12 12.8 2.6 1.3 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function Streptin-Immun PF11083.8 ORF98902 - 0.085 13.3 7.8 0.14 12.5 7.8 1.4 1 0 0 1 1 1 0 Lantibiotic streptin immunity protein FlbD PF06289.11 ORF98902 - 0.1 12.2 0.7 0.1 12.2 0.7 1.9 2 1 0 2 2 2 0 Flagellar and Swarming motility proteins Fib_alpha PF08702.10 ORF98902 - 0.11 12.6 10.6 0.15 12.3 10.6 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Spectrin PF00435.21 ORF98902 - 0.12 12.8 8.7 0.33 11.4 7.8 2.0 1 1 1 2 2 2 0 Spectrin repeat DUF3573 PF12097.8 ORF98902 - 0.7 8.6 4.1 0.8 8.5 4.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) CENP-H PF05837.12 ORF98902 - 1.5 9.3 10.7 1.2 9.6 9.1 1.6 1 1 0 1 1 1 0 Centromere protein H (CENP-H) OEP PF02321.18 ORF98902 - 1.5 8.6 9.7 0.6 9.9 6.9 1.7 1 1 1 2 2 2 0 Outer membrane efflux protein YabA PF06156.13 ORF98902 - 1.5 9.5 10.3 2.7 8.7 10.3 1.7 1 1 0 1 1 1 0 Initiation control protein YabA DUF3498 PF12004.8 ORF98902 - 2.3 7.3 17.9 5.1 6.2 17.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3498) DivIC PF04977.15 ORF96389 - 0.1 12.4 2.7 0.25 11.1 0.1 2.2 2 0 0 2 2 2 0 Septum formation initiator ROQ_II PF18386.1 ORF96267 - 0.026 14.3 2.5 0.039 13.8 0.1 2.3 3 0 0 3 3 3 0 Roquin II domain RRP7 PF12923.7 ORF96097 - 6.2e-21 74.7 9.2 7.4e-21 74.5 9.2 1.1 1 0 0 1 1 1 1 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain Ras PF00071.22 ORF9555 - 2.1e-26 92.5 0.4 2.4e-26 92.3 0.4 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF9555 - 1.7e-06 28.2 0.6 4.9e-06 26.8 0.1 1.8 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF9555 - 0.00067 19.1 0.1 0.00083 18.9 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SNF2_N PF00176.23 ORF9555 - 0.017 13.9 0.0 0.018 13.8 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain RsgA_GTPase PF03193.16 ORF9555 - 0.018 14.9 0.1 0.023 14.6 0.1 1.1 1 0 0 1 1 1 0 RsgA GTPase Ser_hydrolase PF06821.13 ORF9555 - 0.12 12.2 0.1 0.23 11.3 0.1 1.5 1 1 0 1 1 1 0 Serine hydrolase LMP PF04778.12 ORF95383 - 0.053 13.4 0.5 0.079 12.9 0.4 1.4 1 1 0 1 1 1 0 LMP repeated region FtsL PF04999.13 ORF95135 - 1.6e-35 121.0 0.1 1.9e-35 120.7 0.1 1.1 1 0 0 1 1 1 1 Cell division protein FtsL DivIC PF04977.15 ORF95135 - 0.0093 15.7 0.1 0.012 15.3 0.1 1.1 1 0 0 1 1 1 1 Septum formation initiator HupH_C PF04809.13 ORF94390 - 6.7e-32 109.7 0.0 7.5e-32 109.5 0.0 1.0 1 0 0 1 1 1 1 HupH hydrogenase expression protein, C-terminal conserved region Neur_chan_memb PF02932.16 ORF9392 - 2.3 8.2 5.9 2.8 8.0 5.9 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region FAM76 PF16046.5 ORF9392 - 4.2 6.6 14.0 4.9 6.4 14.0 1.1 1 0 0 1 1 1 0 FAM76 protein Myc_target_1 PF15179.6 ORF9392 - 6.9 6.5 10.8 8 6.3 10.8 1.1 1 0 0 1 1 1 0 Myc target protein 1 TIM21 PF08294.11 ORF93414 - 0.033 14.0 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 TIM21 LANC_like PF05147.13 ORF9328 - 2.8e-18 65.6 0.0 3.2e-18 65.5 0.0 1.0 1 0 0 1 1 1 1 Lanthionine synthetase C-like protein GlcNAc_2-epim PF07221.11 ORF9328 - 0.014 14.7 0.1 0.16 11.2 0.1 1.9 1 1 1 2 2 2 0 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) DUF5531 PF17671.1 ORF92972 - 0.069 13.0 3.0 0.62 9.9 2.6 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5531) YMF19 PF02326.15 ORF92972 - 0.14 13.0 1.1 0.21 12.4 1.1 1.4 1 1 0 1 1 1 0 Plant ATP synthase F0 TIM21 PF08294.11 ORF92797 - 0.033 14.0 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 TIM21 RCC1_2 PF13540.6 ORF92763 - 9.7e-09 34.8 2.4 0.025 14.4 0.1 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat ADH_zinc_N PF00107.26 ORF92763 - 0.022 14.7 0.0 4.7 7.2 0.0 2.2 1 1 1 2 2 2 0 Zinc-binding dehydrogenase pPIWI_RE_Y PF18156.1 ORF92430 - 0.07 13.6 1.4 0.096 13.1 1.4 1.4 1 0 0 1 1 1 0 pPIWI_RE three-gene island domain Y Ion_trans PF00520.31 ORF92121 - 4.3e-07 29.4 1.2 6.4e-07 28.9 1.2 1.3 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF92121 - 0.00041 19.2 1.9 0.00056 18.7 1.9 1.1 1 0 0 1 1 1 1 Polycystin cation channel U71 PF17474.2 ORF9136 - 0.1 12.5 1.3 0.1 12.5 1.3 1.9 2 0 0 2 2 2 0 Tegument protein UL11 homolog RecR PF02132.15 ORF9136 - 0.34 10.5 5.0 0.67 9.6 5.0 1.5 1 0 0 1 1 1 0 RecR protein Cpn60_TCP1 PF00118.24 ORF90878 - 1.5e-44 152.5 0.5 1.6e-44 152.4 0.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family CBFD_NFYB_HMF PF00808.23 ORF90295 - 2.7e-14 53.2 0.2 2.7e-14 53.2 0.2 1.7 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF90295 - 2.1e-07 31.4 0.7 2.4e-07 31.2 0.7 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 RXT2_N PF08595.11 ORF90295 - 0.017 15.1 1.3 0.022 14.8 1.3 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal CENP-X PF09415.10 ORF90295 - 0.066 13.5 1.3 0.076 13.3 0.1 1.7 2 0 0 2 2 2 0 CENP-S associating Centromere protein X Ribosomal_L31e PF01198.19 ORF89859 - 6.3e-39 132.1 2.8 8.1e-39 131.7 2.8 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e DUF575 PF04746.12 ORF88074 - 0.056 13.7 0.4 0.086 13.1 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF575) AAA_12 PF13087.6 ORF87939 - 3.5e-06 26.8 0.0 5e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF4041 PF13250.6 ORF87939 - 0.11 12.3 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) UPF0154 PF03672.13 ORF87524 - 0.083 12.9 0.2 0.14 12.2 0.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) MS_channel PF00924.18 ORF87524 - 0.095 12.2 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel RICTOR_V PF14668.6 ORF86668 - 0.28 11.5 0.3 0.55 10.5 0.1 1.6 2 0 0 2 2 2 0 Rapamycin-insensitive companion of mTOR, domain 5 ADP_PFK_GK PF04587.15 ORF86476 - 7.8e-14 51.1 0.0 8e-14 51.0 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region S4 PF01479.25 ORF86008 - 9.2e-08 31.7 0.0 1.4e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 S4 domain UQ_con PF00179.26 ORF85040 - 4.6e-46 155.9 0.1 5.1e-46 155.8 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF85040 - 0.0086 16.4 0.1 0.0098 16.2 0.1 1.2 1 0 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 ORF85040 - 0.017 14.8 0.0 0.02 14.6 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family B UEV PF05743.13 ORF85040 - 0.03 14.2 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 UEV domain G-gamma PF00631.22 ORF85040 - 0.12 12.4 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 GGL domain DUF3450 PF11932.8 ORF8480 - 0.0019 17.6 4.3 0.0023 17.3 4.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Phasin PF05597.11 ORF8480 - 0.093 12.7 5.8 0.28 11.2 5.8 1.8 1 1 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF948 PF06103.11 ORF8480 - 0.095 13.0 1.7 0.38 11.0 0.2 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Syntaxin-6_N PF09177.11 ORF8480 - 0.17 12.5 4.6 0.62 10.7 4.6 1.9 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Fib_alpha PF08702.10 ORF8480 - 1.2 9.3 8.5 2.3 8.4 8.5 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ABC_tran_CTD PF16326.5 ORF8480 - 1.9 8.8 6.7 5.4 7.4 0.1 3.2 2 1 1 3 3 3 0 ABC transporter C-terminal domain PUNUT PF16913.5 ORF8311 - 4.6e-10 39.2 4.4 4.8e-10 39.2 4.4 1.0 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport EamA PF00892.20 ORF8311 - 1.4e-08 35.0 12.2 1.3e-06 28.7 8.6 2.1 2 0 0 2 2 2 2 EamA-like transporter family SLC35F PF06027.12 ORF8311 - 2.3e-08 33.9 0.6 2.7e-08 33.7 0.6 1.0 1 0 0 1 1 1 1 Solute carrier family 35 CRT-like PF08627.10 ORF8311 - 1.6e-05 24.0 0.2 1.7e-05 23.9 0.2 1.1 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like DUF3744 PF12558.8 ORF81138 - 0.085 13.6 0.7 0.26 12.1 0.4 2.0 1 1 1 2 2 2 0 ATP-binding cassette cobalt transporter Flavin_Reduct PF01613.18 ORF80152 - 0.013 15.5 0.2 0.018 15.1 0.2 1.2 1 0 0 1 1 1 0 Flavin reductase like domain DUF2087 PF09860.9 ORF79764 - 0.045 13.9 0.0 0.079 13.1 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) OrfB_IS605 PF01385.19 ORF79764 - 0.19 11.9 3.9 0.12 12.6 1.9 1.7 1 1 1 2 2 2 0 Probable transposase Mto2_bdg PF12808.7 ORF79407 - 0.037 14.3 3.1 5.2 7.5 0.2 2.7 2 0 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region SIKE PF05769.11 ORF79407 - 0.39 10.6 11.2 1.3 9.0 11.2 1.7 1 1 0 1 1 1 0 SIKE family YabA PF06156.13 ORF79407 - 9.4 6.9 8.6 1.8e+02 2.8 8.6 2.4 1 1 0 1 1 1 0 Initiation control protein YabA Frankia_peptide PF14407.6 ORF77983 - 0.082 12.9 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. Bromo_TP PF07524.13 ORF77983 - 0.11 12.5 0.1 0.3 11.1 0.1 1.8 1 1 1 2 2 2 0 Bromodomain associated Dam PF05869.11 ORF7741 - 7.8e-36 123.2 0.0 8.9e-36 123.0 0.0 1.0 1 0 0 1 1 1 1 DNA N-6-adenine-methyltransferase (Dam) DHHC PF01529.20 ORF76280 - 1.6 8.9 8.6 2.4 8.3 8.6 1.3 1 1 0 1 1 1 0 DHHC palmitoyltransferase TMEM190 PF15431.6 ORF76087 - 0.015 15.5 0.1 0.023 14.8 0.1 1.5 1 1 0 1 1 1 0 Transmembrane protein 190 RdRP_2 PF00978.21 ORF76027 - 0.068 12.1 0.1 0.068 12.1 0.1 1.1 1 0 0 1 1 1 0 RNA dependent RNA polymerase DUF5531 PF17671.1 ORF75792 - 0.069 13.0 3.0 0.62 9.9 2.6 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5531) YMF19 PF02326.15 ORF75792 - 0.14 13.0 1.1 0.21 12.4 1.1 1.4 1 1 0 1 1 1 0 Plant ATP synthase F0 E2_bind PF08825.10 ORF74745 - 3.3e-10 40.0 0.6 4.5e-10 39.5 0.6 1.2 1 0 0 1 1 1 1 E2 binding domain E1_UFD PF09358.10 ORF74745 - 0.067 13.9 0.3 0.2 12.4 0.1 1.8 1 1 1 2 2 2 0 Ubiquitin fold domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks192.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks192.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks192.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks192.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CCAP PF11105.8 ORF72474 - 0.027 14.4 0.1 0.035 14.1 0.1 1.2 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a INCENP_ARK-bind PF03941.15 ORF72397 - 0.18 11.8 0.0 0.31 11.0 0.0 1.3 1 0 0 1 1 1 0 Inner centromere protein, ARK binding region DUF3744 PF12558.8 ORF72283 - 0.085 13.6 0.7 0.26 12.1 0.4 2.0 1 1 1 2 2 2 0 ATP-binding cassette cobalt transporter DHHC PF01529.20 ORF71185 - 1.6 8.9 8.6 2.4 8.3 8.6 1.3 1 1 0 1 1 1 0 DHHC palmitoyltransferase Rft-1 PF04506.13 ORF70397 - 2.8e-14 52.8 3.1 3.3e-14 52.6 3.1 1.0 1 0 0 1 1 1 1 Rft protein Polysacc_synt PF01943.17 ORF70397 - 6.4e-05 22.5 0.3 7.4e-05 22.3 0.3 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein SID PF11778.8 ORF70397 - 0.091 12.9 2.7 0.12 12.5 2.7 1.2 1 0 0 1 1 1 0 Septation initiation DUF4079 PF13301.6 ORF70379 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4079) Metallophos PF00149.28 ORF69784 - 4.6e-05 24.0 0.1 4.6e-05 24.0 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Tox-MPTase3 PF15639.6 ORF69728 - 0.088 12.7 0.3 0.11 12.4 0.3 1.3 1 1 0 1 1 1 0 Metallopeptidase toxin 3 OmpH PF03938.14 ORF69728 - 0.089 13.1 4.8 0.1 12.9 4.8 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Na_H_Exchanger PF00999.21 ORF69213 - 5.6e-10 38.5 2.1 5.6e-10 38.5 2.1 1.3 2 0 0 2 2 2 1 Sodium/hydrogen exchanger family Phage_holin_5_2 PF16079.5 ORF69213 - 0.23 11.8 4.0 1.3 9.4 0.6 2.2 2 0 0 2 2 2 0 Phage holin family Hol44, in holin superfamily V B9-C2 PF07162.11 ORF69000 - 1.5e-24 87.1 0.1 2.1e-24 86.6 0.1 1.2 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF69000 - 0.055 13.6 0.1 0.079 13.1 0.1 1.2 1 0 0 1 1 1 0 Cerato-platanin HATPase_c PF02518.26 ORF6877 - 0.0036 17.8 0.0 0.007 16.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF6877 - 0.041 13.9 0.0 0.082 13.0 0.0 1.5 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain UAA PF08449.11 ORF68098 - 6.7e-06 25.5 0.1 7.5e-06 25.4 0.1 1.1 1 0 0 1 1 1 1 UAA transporter family zf-RING_2 PF13639.6 ORF67921 - 4.6e-10 39.7 2.9 6.7e-10 39.2 2.9 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF67921 - 7e-07 28.9 4.5 1.3e-06 28.0 4.5 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF67921 - 8.6e-07 29.2 2.8 2.2e-06 27.9 2.8 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF67921 - 4.5e-06 26.4 3.0 7.4e-06 25.7 3.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF67921 - 7.9e-06 25.7 3.1 1.8e-05 24.5 3.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF67921 - 1.9e-05 24.2 2.3 2.8e-05 23.6 2.3 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 ORF67921 - 2.1e-05 24.5 0.9 4.2e-05 23.5 0.9 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF67921 - 5.8e-05 23.0 2.1 0.0001 22.2 2.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain FANCL_C PF11793.8 ORF67921 - 0.0012 19.0 2.8 0.0026 17.9 2.8 1.6 1 0 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 ORF67921 - 0.0061 16.7 4.1 0.011 15.8 4.1 1.5 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4_3 PF13920.6 ORF67921 - 0.0099 15.7 1.6 0.015 15.1 1.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF67921 - 0.012 15.7 2.4 0.027 14.5 2.4 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 ORF67921 - 0.019 15.1 0.5 0.068 13.4 0.5 1.9 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF67921 - 0.029 14.4 1.8 0.051 13.6 1.8 1.5 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Prok-RING_4 PF14447.6 ORF67921 - 0.095 12.6 3.1 0.18 11.7 3.1 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3H2C3 PF17122.5 ORF67921 - 0.1 12.7 1.9 0.16 12.0 1.9 1.4 1 1 0 1 1 1 0 Zinc-finger PHD PF00628.29 ORF67921 - 0.13 12.2 3.4 0.24 11.3 3.4 1.5 1 0 0 1 1 1 0 PHD-finger OmpH PF03938.14 ORF67921 - 0.27 11.6 10.3 0.31 11.4 10.3 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF67921 - 0.56 9.5 5.2 0.61 9.4 5.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FapA PF03961.13 ORF67921 - 0.69 8.5 11.7 0.84 8.2 11.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Exonuc_VII_L PF02601.15 ORF67921 - 1.6 8.3 11.8 1.6 8.2 11.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit YojJ PF10372.9 ORF67921 - 3.6 7.8 9.1 1.5 9.0 4.1 2.4 2 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus zf-Tim10_DDP PF02953.15 ORF66269 - 1.2 8.8 4.4 2.1 8.0 4.4 1.4 1 0 0 1 1 1 0 Tim10/DDP family zinc finger DUF4262 PF14081.6 ORF6504 - 0.17 12.1 0.1 0.25 11.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4262) DNA_ligase_ZBD PF03119.16 ORF637 - 0.05 13.6 0.1 0.05 13.6 0.1 2.6 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain AgrB PF04647.15 ORF63604 - 0.00085 18.7 2.0 0.0011 18.3 2.0 1.2 1 0 0 1 1 1 1 Accessory gene regulator B DUF4305 PF14146.6 ORF62883 - 0.033 14.4 0.0 0.061 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4305) Phage_Treg PF04761.12 ORF61766 - 0.14 12.3 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Lactococcus bacteriophage putative transcription regulator Frankia_peptide PF14407.6 ORF60565 - 0.082 12.9 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. Bromo_TP PF07524.13 ORF60565 - 0.11 12.5 0.1 0.3 11.1 0.1 1.8 1 1 1 2 2 2 0 Bromodomain associated DUF4662 PF15578.6 ORF60431 - 0.45 10.3 9.2 0.5 10.1 9.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4662) Atg14 PF10186.9 ORF60431 - 3.5 6.6 12.1 4.2 6.4 12.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 adh_short_C2 PF13561.6 ORF60297 - 0.00049 19.7 0.0 0.00052 19.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF60297 - 0.0073 15.8 0.1 0.012 15.1 0.1 1.3 1 0 0 1 1 1 1 short chain dehydrogenase TIM21 PF08294.11 ORF58081 - 0.033 14.0 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 TIM21 DUF3342 PF11822.8 ORF57822 - 0.003 17.7 0.9 0.0081 16.3 0.0 2.1 3 0 0 3 3 3 1 Domain of unknown function (DUF3342) SAS-6_N PF16531.5 ORF57547 - 0.0065 17.0 2.2 0.01 16.4 2.2 1.5 1 1 0 1 1 1 1 Centriolar protein SAS N-terminal DUF4539 PF15072.6 ORF57547 - 0.11 12.5 0.0 0.21 11.6 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4539) zf-RING_2 PF13639.6 ORF57419 - 4.6e-10 39.7 2.9 6.7e-10 39.2 2.9 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF57419 - 7e-07 28.9 4.5 1.3e-06 28.0 4.5 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF57419 - 8.6e-07 29.2 2.8 2.2e-06 27.9 2.8 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF57419 - 4.5e-06 26.4 3.0 7.4e-06 25.7 3.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF57419 - 7.9e-06 25.7 3.1 1.8e-05 24.5 3.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF57419 - 1.9e-05 24.2 2.3 2.8e-05 23.6 2.3 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 ORF57419 - 2.1e-05 24.5 0.9 4.2e-05 23.5 0.9 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF57419 - 5.8e-05 23.0 2.1 0.0001 22.2 2.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain FANCL_C PF11793.8 ORF57419 - 0.0012 19.0 2.8 0.0026 17.9 2.8 1.6 1 0 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 ORF57419 - 0.0061 16.7 4.1 0.011 15.8 4.1 1.5 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4_3 PF13920.6 ORF57419 - 0.0099 15.7 1.6 0.015 15.1 1.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF57419 - 0.012 15.7 2.4 0.027 14.5 2.4 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 ORF57419 - 0.019 15.1 0.5 0.068 13.4 0.5 1.9 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF57419 - 0.029 14.4 1.8 0.051 13.6 1.8 1.5 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Prok-RING_4 PF14447.6 ORF57419 - 0.095 12.6 3.1 0.18 11.7 3.1 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3H2C3 PF17122.5 ORF57419 - 0.1 12.7 1.9 0.16 12.0 1.9 1.4 1 1 0 1 1 1 0 Zinc-finger PHD PF00628.29 ORF57419 - 0.13 12.2 3.4 0.24 11.3 3.4 1.5 1 0 0 1 1 1 0 PHD-finger OmpH PF03938.14 ORF57419 - 0.27 11.6 10.3 0.31 11.4 10.3 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF57419 - 0.56 9.5 5.2 0.61 9.4 5.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FapA PF03961.13 ORF57419 - 0.69 8.5 11.7 0.84 8.2 11.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Exonuc_VII_L PF02601.15 ORF57419 - 1.6 8.3 11.8 1.6 8.2 11.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit YojJ PF10372.9 ORF57419 - 3.6 7.8 9.1 1.5 9.0 4.1 2.4 2 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus DUF2509 PF10713.9 ORF5704 - 2.5e-35 121.4 2.0 2.8e-35 121.3 2.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2509) Choline_sulf_C PF12411.8 ORF5704 - 0.17 11.7 2.7 0.12 12.2 0.8 1.7 1 1 1 2 2 2 0 Choline sulfatase enzyme C terminal ATF7IP_BD PF16788.5 ORF56758 - 0.012 15.7 2.6 0.014 15.5 2.6 1.1 1 0 0 1 1 1 0 ATF-interacting protein binding domain DUF1640 PF07798.11 ORF56758 - 0.034 14.2 1.4 0.033 14.2 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) Cyclin_N PF00134.23 ORF55142 - 0.16 11.7 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Cyclin, N-terminal domain PK_C PF02887.16 ORF54910 - 7.9e-10 39.0 0.0 9.1e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Frankia_peptide PF14407.6 ORF54191 - 0.082 12.9 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. Bromo_TP PF07524.13 ORF54191 - 0.11 12.5 0.1 0.3 11.1 0.1 1.8 1 1 1 2 2 2 0 Bromodomain associated DHHC PF01529.20 ORF53601 - 1.6 8.9 8.6 2.4 8.3 8.6 1.3 1 1 0 1 1 1 0 DHHC palmitoyltransferase RP853 PF17542.2 ORF5336 - 0.015 14.5 1.7 0.014 14.5 1.7 1.1 1 0 0 1 1 1 0 Uncharacterized RP853 DnaB_2 PF07261.11 ORF5336 - 0.024 14.4 3.2 2.4 8.0 0.1 2.7 2 1 0 2 2 2 0 Replication initiation and membrane attachment DUF1465 PF07323.12 ORF5336 - 0.064 13.1 0.3 0.082 12.8 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1465) B9-C2 PF07162.11 ORF52941 - 1.5e-24 87.1 0.1 2.1e-24 86.6 0.1 1.2 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF52941 - 0.055 13.6 0.1 0.079 13.1 0.1 1.2 1 0 0 1 1 1 0 Cerato-platanin EF-hand_1 PF00036.32 ORF51968 - 3.1e-08 32.6 4.1 0.0014 18.1 0.2 3.0 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF51968 - 4.7e-08 32.2 3.0 0.00049 19.5 0.8 2.5 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF51968 - 3.5e-06 27.3 0.2 4.6e-06 26.9 0.2 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_6 PF13405.6 ORF51968 - 1e-05 25.0 2.9 0.025 14.5 0.1 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF51968 - 3.4e-05 24.2 2.7 0.00036 20.9 1.8 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF51968 - 0.011 15.5 6.3 0.031 14.1 0.1 2.8 2 1 1 3 3 3 0 EF-hand domain pair DUF3930 PF13067.6 ORF51968 - 0.15 12.4 2.8 10 6.5 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3930) DnaJ_C PF01556.18 ORF51460 - 0.021 14.9 0.0 0.76 9.9 0.0 2.1 1 1 0 1 1 1 0 DnaJ C terminal domain Sulfatase PF00884.23 ORF51435 - 1.2e-15 57.8 0.2 1.2e-15 57.7 0.2 1.1 1 0 0 1 1 1 1 Sulfatase 7TMR-DISM_7TM PF07695.11 ORF51247 - 0.0003 20.8 16.8 0.0024 17.8 10.1 2.2 1 1 1 2 2 2 2 7TM diverse intracellular signalling ABC2_membrane_5 PF13346.6 ORF51247 - 0.53 9.8 17.6 0.86 9.1 17.6 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2157 PF09925.9 ORF51247 - 1 9.1 7.5 9.4 6.0 7.5 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF4282 PF14110.6 ORF51247 - 1.9 9.3 16.6 1.5 9.6 4.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) Peptidase_U4 PF03419.13 ORF51247 - 2.5 7.3 13.3 3.1 7.0 13.3 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA ABC2_membrane_3 PF12698.7 ORF51247 - 4 6.4 21.8 9.6 5.2 21.8 1.5 1 1 0 1 1 1 0 ABC-2 family transporter protein Tetraspanin PF00335.20 ORF51247 - 6.4 6.4 15.0 9.8e+02 -0.7 15.0 2.0 1 1 0 1 1 1 0 Tetraspanin family RNA_POL_M_15KD PF02150.16 ORF50214 - 0.0027 17.5 0.9 0.06 13.2 0.1 2.4 1 1 1 2 2 2 2 RNA polymerases M/15 Kd subunit Thi4 PF01946.17 ORF49439 - 0.11 11.7 0.3 0.15 11.3 0.3 1.2 1 0 0 1 1 1 0 Thi4 family Flag1_repress PF03614.13 ORF49073 - 0.051 13.4 0.1 0.065 13.0 0.1 1.2 1 0 0 1 1 1 0 Repressor of phase-1 flagellin zf-Tim10_DDP PF02953.15 ORF48884 - 1.2 8.8 4.4 2.1 8.0 4.4 1.4 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Peptidase_M14 PF00246.24 ORF48210 - 7.4e-07 29.2 0.1 3.4e-06 27.1 0.1 1.8 1 1 0 1 1 1 1 Zinc carboxypeptidase AstE_AspA PF04952.14 ORF48210 - 0.073 12.1 0.0 0.073 12.1 0.0 1.1 1 0 0 1 1 1 0 Succinylglutamate desuccinylase / Aspartoacylase family Ribosomal_L22e PF01776.17 ORF48151 - 1.4e-44 150.9 0.2 1.6e-44 150.7 0.2 1.0 1 0 0 1 1 1 1 Ribosomal L22e protein family CbtA_toxin PF06755.12 ORF4764 - 2.9e-56 188.3 0.0 3.4e-56 188.1 0.0 1.0 1 0 0 1 1 1 1 CbtA_toxin of type IV toxin-antitoxin system PI3K_rbd PF00794.18 ORF47571 - 0.059 13.5 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain Adeno_100 PF02438.16 ORF47469 - 1.9 6.6 11.0 2 6.5 11.0 1.1 1 0 0 1 1 1 0 Late 100kD protein NRD1_2 PF01995.16 ORF47072 - 0.007 15.7 1.0 0.0081 15.5 0.4 1.4 1 1 0 1 1 1 1 NrpR regulatory domains NRD1 and 2 DUF3523 PF12037.8 ORF47072 - 1.2 8.4 25.4 1.3 8.3 25.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) Mgr1 PF08602.10 ORF47072 - 2.7 6.7 10.4 3.2 6.5 10.4 1.2 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit Caldesmon PF02029.15 ORF47072 - 4.6 5.9 31.3 4.7 5.8 31.3 1.0 1 0 0 1 1 1 0 Caldesmon DUF2252 PF10009.9 ORF47072 - 5.3 6.0 10.8 5.6 5.9 10.8 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) EIIBC-GUT_N PF03612.14 ORF47072 - 5.4 6.7 7.9 7.3 6.3 7.9 1.3 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Membralin PF09746.9 ORF47072 - 7.4 5.5 12.4 8.1 5.4 12.4 1.0 1 0 0 1 1 1 0 Tumour-associated protein IZUMO PF15005.6 ORF47072 - 7.9 7.0 13.6 9 6.8 13.6 1.0 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DNA_topoisoIV PF00521.20 ORF46600 - 1.9e-10 40.2 0.0 2.3e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A Lact_bio_phlase PF09508.10 ORF46600 - 0.059 11.8 0.0 0.076 11.4 0.0 1.1 1 0 0 1 1 1 0 Lacto-N-biose phosphorylase N-terminal TIM barrel domain RbsD_FucU PF05025.13 ORF46006 - 1.4e-27 96.7 0.0 1.6e-27 96.6 0.0 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family CFTR_R PF14396.6 ORF45936 - 0.2 11.2 0.0 0.27 10.7 0.0 1.2 1 0 0 1 1 1 0 Cystic fibrosis TM conductance regulator (CFTR), regulator domain MFS_1 PF07690.16 ORF457 - 0.0005 19.1 3.4 0.00053 19.0 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily EF-hand_6 PF13405.6 ORF4561 - 0.0049 16.7 0.1 0.016 15.1 0.1 1.8 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF4561 - 0.0058 17.1 0.5 0.009 16.4 0.5 1.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF4561 - 0.0058 16.1 0.5 0.014 14.9 0.2 1.8 1 1 0 1 1 1 1 EF hand TSNAXIP1_N PF15739.5 ORF4561 - 0.012 16.0 0.8 0.018 15.4 0.8 1.3 1 0 0 1 1 1 0 Translin-associated factor X-interacting N-terminus EF-hand_8 PF13833.6 ORF4561 - 0.13 12.2 0.5 0.22 11.4 0.4 1.6 2 1 0 2 2 2 0 EF-hand domain pair DUF2162 PF09930.9 ORF45530 - 0.026 13.9 3.6 0.036 13.5 3.6 1.4 1 1 0 1 1 1 0 Predicted transporter (DUF2162) EF-hand_1 PF00036.32 ORF44753 - 3.2e-08 32.6 4.1 0.0014 18.1 0.2 3.0 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF44753 - 4.8e-08 32.1 3.0 0.00049 19.5 0.8 2.5 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF44753 - 2.7e-06 27.7 0.1 3.5e-06 27.3 0.1 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_6 PF13405.6 ORF44753 - 1e-05 25.0 2.9 0.025 14.5 0.1 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF44753 - 3e-05 24.4 2.5 0.00037 20.9 1.8 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF44753 - 0.011 15.6 6.3 0.031 14.1 0.1 2.8 2 1 1 3 3 3 0 EF-hand domain pair DUF1043 PF06295.12 ORF44753 - 0.021 14.8 1.3 0.033 14.2 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) Chordopox_A13L PF05961.11 ORF44753 - 0.058 13.6 0.0 0.088 13.1 0.0 1.3 1 0 0 1 1 1 0 Chordopoxvirus A13L protein O-antigen_lig PF13425.6 ORF44753 - 0.15 10.8 0.5 0.14 10.9 0.5 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3450 PF11932.8 ORF44268 - 0.0019 17.6 4.3 0.0023 17.3 4.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Phasin PF05597.11 ORF44268 - 0.093 12.7 5.8 0.28 11.2 5.8 1.8 1 1 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF948 PF06103.11 ORF44268 - 0.095 13.0 1.7 0.38 11.0 0.2 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Syntaxin-6_N PF09177.11 ORF44268 - 0.17 12.5 4.6 0.62 10.7 4.6 1.9 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Fib_alpha PF08702.10 ORF44268 - 1.2 9.3 8.5 2.3 8.4 8.5 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ABC_tran_CTD PF16326.5 ORF44268 - 1.9 8.8 6.7 5.4 7.4 0.1 3.2 2 1 1 3 3 3 0 ABC transporter C-terminal domain DUF3772 PF12607.8 ORF42197 - 0.015 15.1 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) Lin0512_fam PF09585.10 ORF41999 - 0.91 9.6 2.0 55 3.8 0.1 2.7 1 1 2 3 3 3 0 Conserved hypothetical protein (Lin0512_fam) Hamartin PF04388.12 ORF41999 - 6.9 5.2 10.1 8.4 4.9 10.1 1.2 1 0 0 1 1 1 0 Hamartin protein HTH_Tnp_1 PF01527.20 ORF41351 - 1.4e-22 79.8 2.0 2.6e-22 78.9 1.0 1.8 2 0 0 2 2 2 1 Transposase HTH_23 PF13384.6 ORF41351 - 8.9e-05 22.2 0.1 0.00017 21.3 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain CENP-B_N PF04218.13 ORF41351 - 0.00055 19.5 0.1 0.001 18.6 0.1 1.4 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain HTH_28 PF13518.6 ORF41351 - 0.00064 19.8 1.8 0.00094 19.3 0.0 2.2 2 1 1 3 3 3 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 ORF41351 - 0.0029 17.0 1.5 0.0043 16.4 0.1 2.0 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 BTD PF09270.10 ORF41351 - 0.033 14.4 0.0 0.037 14.2 0.0 1.1 1 0 0 1 1 1 0 Beta-trefoil DNA-binding domain DUF4982 PF16355.5 ORF41351 - 0.036 14.0 0.3 0.35 10.9 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4982) DUF4194 PF13835.6 ORF41351 - 0.064 13.0 0.4 0.082 12.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4194) Atg8 PF02991.16 ORF41283 - 1.2e-24 86.4 0.1 1.4e-24 86.2 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like NUP PF06516.11 ORF40868 - 3.5e-14 52.8 0.0 4.3e-14 52.5 0.0 1.0 1 0 0 1 1 1 1 Purine nucleoside permease (NUP) Glyco_transf_25 PF01755.17 ORF39955 - 2.4e-12 47.1 0.0 2.4e-12 47.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) Peptidase_M14 PF00246.24 ORF39692 - 7.4e-07 29.2 0.1 3.4e-06 27.1 0.1 1.8 1 1 0 1 1 1 1 Zinc carboxypeptidase AstE_AspA PF04952.14 ORF39692 - 0.073 12.1 0.0 0.073 12.1 0.0 1.1 1 0 0 1 1 1 0 Succinylglutamate desuccinylase / Aspartoacylase family zf-C3HC4 PF00097.25 ORF39250 - 0.09 12.7 10.0 0.4 10.6 5.6 2.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.7 ORF39250 - 0.38 10.8 12.5 16 5.6 12.5 2.7 1 1 0 1 1 1 0 Double zinc ribbon zf-RING_5 PF14634.6 ORF39250 - 0.46 10.5 8.2 9.5 6.3 5.7 2.6 2 1 0 2 2 2 0 zinc-RING finger domain Zn-ribbon_8 PF09723.10 ORF39250 - 0.7 10.1 9.5 3.1 8.0 3.0 3.2 3 1 0 3 3 3 0 Zinc ribbon domain HypA PF01155.19 ORF39250 - 1.2 9.2 9.8 0.12 12.4 0.6 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-H2C2_2 PF13465.6 ORF39250 - 4.7 7.8 14.3 5.4 7.6 0.5 3.7 4 0 0 4 4 4 0 Zinc-finger double domain zinc-ribbons_6 PF07191.12 ORF39250 - 6 6.9 13.6 16 5.6 7.1 3.0 1 1 1 2 2 2 0 zinc-ribbons PNK3P PF08645.11 ORF38954 - 0.026 14.2 0.1 0.033 13.9 0.1 1.3 1 1 0 1 1 1 0 Polynucleotide kinase 3 phosphatase AAA_12 PF13087.6 ORF38077 - 1.8e-10 40.8 0.1 2.2e-10 40.5 0.1 1.1 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 ORF38077 - 3e-05 23.7 0.0 8.4e-05 22.3 0.0 1.7 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain DAGK_cat PF00781.24 ORF38077 - 0.034 13.8 0.0 0.16 11.6 0.0 1.8 1 1 1 2 2 2 0 Diacylglycerol kinase catalytic domain ELM2 PF01448.24 ORF35528 - 2.4e-09 37.8 0.5 0.00038 21.2 0.0 2.7 3 0 0 3 3 3 2 ELM2 domain E3_UFM1_ligase PF09743.9 ORF35308 - 0.023 14.3 0.2 0.026 14.1 0.2 1.1 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 DHHC PF01529.20 ORF34134 - 0.014 15.5 8.8 0.018 15.1 8.8 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase EamA PF00892.20 ORF33863 - 0.0022 18.2 4.9 0.0027 17.9 4.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family Sugar_transport PF06800.12 ORF33863 - 0.0029 17.0 2.1 0.0033 16.8 2.1 1.0 1 0 0 1 1 1 1 Sugar transport protein Pyr_excise PF03013.14 ORF33780 - 0.052 13.5 0.0 0.089 12.8 0.0 1.3 1 0 0 1 1 1 0 Pyrimidine dimer DNA glycosylase HU-CCDC81_bac_2 PF18175.1 ORF33751 - 0.0017 18.2 3.0 0.003 17.4 3.0 1.5 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 DUF1741 PF08427.10 ORF33751 - 0.028 14.1 3.5 0.025 14.3 2.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1741) Bac_DNA_binding PF00216.21 ORF33751 - 0.087 13.0 0.1 0.17 12.1 0.1 1.4 1 0 0 1 1 1 0 Bacterial DNA-binding protein Guanylate_cyc PF00211.20 ORF33709 - 2.8e-06 27.1 0.1 3.4e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain GAS2 PF02187.17 ORF33561 - 0.15 12.1 0.1 2.6 8.2 0.0 2.3 2 0 0 2 2 2 0 Growth-Arrest-Specific Protein 2 Domain NTF2 PF02136.20 ORF32185 - 7.2e-26 91.1 0.0 8.1e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_2 PF12680.7 ORF32185 - 0.016 15.8 0.0 0.02 15.5 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain DUF4440 PF14534.6 ORF32185 - 0.15 12.4 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) zf-TAZ PF02135.16 ORF29493 - 1.1 9.7 9.3 1.5 9.3 0.4 2.8 2 1 0 2 2 2 0 TAZ zinc finger DUF805 PF05656.14 ORF2934 - 3.3e-35 120.6 3.1 3.8e-35 120.5 3.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF805) DUF3099 PF11298.8 ORF2934 - 0.82 9.9 2.9 0.49 10.6 0.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3099) B9-C2 PF07162.11 ORF28626 - 1.5e-24 87.1 0.1 2.1e-24 86.6 0.1 1.2 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF28626 - 0.055 13.6 0.1 0.079 13.1 0.1 1.2 1 0 0 1 1 1 0 Cerato-platanin Frankia_peptide PF14407.6 ORF28580 - 0.082 12.9 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. Bromo_TP PF07524.13 ORF28580 - 0.11 12.5 0.1 0.3 11.1 0.1 1.8 1 1 1 2 2 2 0 Bromodomain associated DUF1731 PF08338.11 ORF27865 - 7.7e-20 70.5 0.2 1.2e-19 69.9 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1731) Epimerase PF01370.21 ORF27865 - 0.011 15.2 0.1 0.022 14.2 0.0 1.5 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Helo_like_N PF17111.5 ORF27535 - 0.058 12.7 1.5 0.081 12.3 0.5 1.7 2 0 0 2 2 2 0 Fungal N-terminal domain of STAND proteins Secretin PF00263.21 ORF27535 - 0.14 11.8 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial type II and III secretion system protein Oxidored_q6 PF01058.22 ORF27388 - 1.3e-18 67.1 0.0 1.5e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Antifungal_prot PF11402.8 ORF27124 - 0.17 12.2 2.0 0.23 11.7 0.4 2.0 2 0 0 2 2 2 0 Antifungal protein MORN PF02493.20 ORF26119 - 1.9e-11 43.1 9.9 0.00043 20.0 0.0 4.0 5 0 0 5 5 5 3 MORN repeat DUF3048_C PF17479.2 ORF26119 - 0.041 14.3 1.1 2.8 8.4 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain EF-hand_1 PF00036.32 ORF24990 - 2e-14 52.0 5.1 1.7e-06 27.1 0.3 2.9 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF24990 - 8.9e-12 44.7 4.4 6.1e-08 32.4 0.2 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF24990 - 9.5e-12 45.2 1.3 3e-06 27.6 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF24990 - 5.3e-11 41.5 5.8 1.8e-06 27.4 0.5 2.8 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF24990 - 6.2e-09 35.0 7.6 1e-05 24.8 0.7 2.9 3 0 0 3 3 3 2 EF hand EF-hand_4 PF12763.7 ORF24990 - 0.0047 16.9 2.7 0.02 14.8 0.2 2.1 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF24990 - 0.022 15.1 0.6 5.5 7.4 0.1 2.1 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region gp45-slide_C PF09116.10 ORF24990 - 0.031 14.3 1.1 0.042 13.9 0.9 1.3 1 1 0 1 1 1 0 gp45 sliding clamp, C terminal DUF4011 PF13195.6 ORF24990 - 0.078 12.9 0.5 0.2 11.6 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4011) FlaF PF07309.11 ORF24990 - 0.12 12.4 0.2 0.17 11.9 0.2 1.3 1 0 0 1 1 1 0 Flagellar protein FlaF HMw1_D2 PF18254.1 ORF2443 - 0.022 15.1 0.0 0.04 14.3 0.0 1.4 1 0 0 1 1 1 0 HMW1 domain 2 Pneumo_ncap PF03246.13 ORF2443 - 0.03 13.1 0.0 0.039 12.7 0.0 1.2 1 0 0 1 1 1 0 Pneumovirus nucleocapsid protein CWC25 PF12542.8 ORF2443 - 0.036 14.9 0.1 0.065 14.1 0.1 1.4 1 0 0 1 1 1 0 Pre-mRNA splicing factor B9-C2 PF07162.11 ORF2366 - 1.5e-24 87.1 0.1 2.1e-24 86.6 0.1 1.2 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF2366 - 0.055 13.6 0.1 0.079 13.1 0.1 1.2 1 0 0 1 1 1 0 Cerato-platanin Fe-ADH PF00465.19 ORF21412 - 3.3e-11 42.6 0.1 3.7e-11 42.5 0.1 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase GlutR_N PF05201.15 ORF21412 - 0.042 13.6 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, N-terminal domain DHQ_synthase PF01761.20 ORF21412 - 0.14 11.2 0.1 0.17 11.0 0.1 1.1 1 0 0 1 1 1 0 3-dehydroquinate synthase DUF5409 PF17421.2 ORF20841 - 8.1 7.2 6.0 2.5 8.9 0.9 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5409) Sulfatase PF00884.23 ORF2026 - 2.1e-13 50.4 0.2 2.2e-13 50.3 0.2 1.1 1 0 0 1 1 1 1 Sulfatase MFS_1 PF07690.16 ORF19159 - 0.0005 19.1 3.4 0.00053 19.0 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Opiods_neuropep PF01160.18 ORF1796 - 3.8 7.7 12.5 0.74 10.0 0.5 3.7 3 1 0 3 3 3 0 Vertebrate endogenous opioids neuropeptide mRNA_cap_enzyme PF01331.19 ORF17544 - 1.7e-09 37.8 0.1 3.2e-09 36.9 0.0 1.4 1 1 0 1 1 1 1 mRNA capping enzyme, catalytic domain Abhydrolase_9_N PF15420.6 ORF17346 - 0.00031 20.8 0.1 0.00035 20.6 0.1 1.1 1 0 0 1 1 1 1 Alpha/beta-hydrolase family N-terminus DUF4013 PF13197.6 ORF17346 - 0.073 12.9 8.4 0.1 12.4 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) DUF2207 PF09972.9 ORF17346 - 0.14 10.9 1.4 0.17 10.6 1.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DHHC PF01529.20 ORF17346 - 0.76 9.9 4.1 1 9.4 4.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase PDZ PF00595.24 ORF16567 - 5.4e-07 29.9 0.0 6.9e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF16567 - 0.00024 20.9 0.0 0.00037 20.3 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 ORF16567 - 0.0096 16.2 0.0 0.012 15.9 0.0 1.2 1 0 0 1 1 1 1 PDZ domain SNN_linker PF09050.10 ORF16567 - 0.29 10.9 3.0 0.53 10.1 3.0 1.4 1 0 0 1 1 1 0 Stannin unstructured linker SAS-6_N PF16531.5 ORF16492 - 0.0065 17.0 2.2 0.01 16.4 2.2 1.5 1 1 0 1 1 1 1 Centriolar protein SAS N-terminal DUF4539 PF15072.6 ORF16492 - 0.11 12.5 0.0 0.21 11.6 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4539) Sorting_nexin PF03700.13 ORF15887 - 0.32 11.5 8.7 4.6 7.8 8.6 2.0 1 1 0 1 1 1 0 Sorting nexin, N-terminal domain DNA_pol_phi PF04931.13 ORF15887 - 1.5 6.8 8.2 1.4 6.9 8.2 1.0 1 0 0 1 1 1 0 DNA polymerase phi HCO3_cotransp PF00955.21 ORF15424 - 3.5e-10 39.4 0.0 4.5e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 HCO3- transporter family B9-C2 PF07162.11 ORF14217 - 1.5e-24 87.1 0.1 2.1e-24 86.6 0.1 1.2 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF14217 - 0.055 13.6 0.1 0.079 13.1 0.1 1.2 1 0 0 1 1 1 0 Cerato-platanin DZR PF12773.7 ORF13110 - 0.011 15.7 0.6 0.016 15.2 0.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF13110 - 0.014 16.2 0.5 0.021 15.6 0.5 1.3 1 0 0 1 1 1 0 zinc-ribbon family Cript PF10235.9 ORF13110 - 0.02 15.5 0.1 0.031 14.8 0.1 1.4 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT zf-C2HC5 PF06221.13 ORF13110 - 0.12 12.3 1.9 0.25 11.4 1.9 1.5 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type NOB1_Zn_bind PF08772.11 ORF13110 - 0.12 12.5 2.3 0.2 11.8 2.3 1.5 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 ORF13110 - 0.17 11.7 4.3 0.37 10.6 4.3 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF13110 - 8.2 6.0 7.3 3.4 7.2 4.3 2.0 2 1 0 2 2 2 0 zinc-ribbon domain DnaJ PF00226.31 ORF11826 - 0.0053 16.9 0.0 0.0082 16.2 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain Mago-bind PF09282.10 ORF11826 - 0.035 14.0 0.1 0.086 12.7 0.1 1.7 1 0 0 1 1 1 0 Mago binding Cep57_CLD_2 PF14197.6 ORF11826 - 0.058 13.5 0.2 0.078 13.1 0.2 1.1 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 PH PF00169.29 ORF112338 - 9.9e-19 67.8 0.2 1.2e-18 67.5 0.2 1.1 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF112338 - 2.4e-06 27.9 0.4 5.8e-05 23.5 0.4 2.0 1 1 0 1 1 1 1 Pleckstrin homology domain PH_3 PF14593.6 ORF112338 - 5.7e-06 26.4 0.1 1.6e-05 24.9 0.1 1.6 1 1 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF112338 - 2.6e-05 24.4 0.2 4.9e-05 23.5 0.2 1.4 1 1 0 1 1 1 1 Pleckstrin homology domain PH_13 PF16652.5 ORF112338 - 0.00078 19.3 0.0 0.00092 19.0 0.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain PH_9 PF15410.6 ORF112338 - 0.032 14.6 0.2 0.15 12.5 0.2 1.8 1 1 0 1 1 1 0 Pleckstrin homology domain DUF1764 PF08576.10 ORF112179 - 1.5e-09 38.7 11.8 1.5e-09 38.7 11.8 2.0 1 1 1 2 2 2 1 Eukaryotic protein of unknown function (DUF1764) CDC27 PF09507.10 ORF112179 - 0.25 10.7 19.4 0.28 10.5 19.4 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 PaREP1 PF05942.11 ORF112179 - 1.4 8.9 12.4 0.14 12.1 2.9 2.1 1 1 1 2 2 2 0 Archaeal PaREP1/PaREP8 family Band_3_cyto PF07565.13 ORF112179 - 7.5 6.3 11.4 9.4 6.0 11.4 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain Ribosomal_L12 PF00542.19 ORF112067 - 6.4e-31 106.5 8.6 6.4e-31 106.5 8.6 1.6 2 1 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 ORF112067 - 1.2e-16 60.1 10.9 1.2e-16 60.1 10.9 3.5 2 1 2 4 4 4 1 Ribosomal protein L7/L12 dimerisation domain Peptidase_A4 PF01828.17 ORF111396 - 0.059 12.8 0.4 0.078 12.4 0.4 1.1 1 0 0 1 1 1 0 Peptidase A4 family LapA_dom PF06305.11 ORF110710 - 0.28 11.0 0.1 0.28 11.0 0.1 2.0 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain FERM_N PF09379.10 ORF109639 - 0.12 12.3 0.1 0.2 11.6 0.1 1.3 1 0 0 1 1 1 0 FERM N-terminal domain TAL_FSA PF00923.19 ORF109155 - 3.5e-18 65.9 0.8 5.9e-18 65.2 0.8 1.3 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase CCDC92 PF14916.6 ORF10614 - 0.00032 20.4 0.7 0.00074 19.2 0.7 1.6 1 0 0 1 1 1 1 Coiled-coil domain of unknown function TT_ORF1 PF02956.14 ORF10614 - 1.1 7.9 6.3 1.2 7.7 6.3 1.0 1 0 0 1 1 1 0 TT viral orf 1 EF-hand_1 PF00036.32 ORF105721 - 1.2e-06 27.7 0.0 0.024 14.2 0.0 3.2 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF105721 - 1.4e-05 25.4 0.2 0.26 11.8 0.0 2.4 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF105721 - 3.2e-05 23.5 0.1 0.3 11.1 0.0 3.0 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF105721 - 0.013 15.3 0.0 0.15 11.9 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain pair EF-hand_9 PF14658.6 ORF105721 - 0.041 14.2 0.0 0.086 13.2 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain DUF4834 PF16118.5 ORF105432 - 0.062 14.3 0.0 0.1 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Tmemb_9 PF05434.11 ORF105432 - 8.1 6.3 6.7 15 5.5 6.7 1.6 1 1 0 1 1 1 0 TMEM9 Clathrin_propel PF01394.20 ORF105357 - 0.069 13.5 0.0 0.19 12.1 0.0 1.8 1 0 0 1 1 1 0 Clathrin propeller repeat GST_N PF02798.20 ORF104851 - 0.05 14.0 0.1 0.11 12.9 0.1 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Oxidored_molyb PF00174.19 ORF10410 - 4e-11 42.8 0.1 5e-11 42.5 0.1 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Octopine_DH PF02317.17 ORF103522 - 1.4e-10 41.4 0.1 1.7e-10 41.2 0.1 1.1 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain EF-hand_5 PF13202.6 ORF103427 - 3.6e-14 51.5 0.2 6.1e-06 25.5 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 ORF103427 - 1e-13 49.8 0.3 3.9e-06 26.0 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF103427 - 2.3e-12 45.8 0.3 1.2e-06 27.9 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF103427 - 8.6e-12 45.3 0.4 6.2e-11 42.6 0.3 1.9 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF103427 - 1.4e-09 37.6 0.6 6.5e-05 22.7 0.2 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF103427 - 0.053 13.4 0.0 0.4 10.6 0.0 2.1 2 0 0 2 2 2 0 EF hand SPARC_Ca_bdg PF10591.9 ORF103427 - 0.072 13.4 0.1 9.8 6.5 0.0 2.1 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Oxidored_q3 PF00499.20 ORF102834 - 1.7e-14 53.7 4.9 2e-14 53.6 4.9 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Frizzled PF01534.17 ORF102834 - 0.0077 15.3 0.1 0.0086 15.2 0.1 1.1 1 0 0 1 1 1 1 Frizzled/Smoothened family membrane region PhoLip_ATPase_C PF16212.5 ORF102834 - 0.091 12.5 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal TctB PF07331.11 ORF102834 - 0.15 12.3 4.9 0.4 11.0 5.3 1.5 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Pho86 PF11124.8 ORF102834 - 0.22 11.0 0.0 0.25 10.8 0.0 1.0 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 DUF3382 PF11862.8 ORF102834 - 0.88 9.9 5.9 0.42 10.9 2.7 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF3382) AP3D1 PF06375.11 ORF102448 - 0.54 10.5 9.2 0.66 10.2 9.2 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Aim19 PF10315.9 ORF101595 - 0.0029 17.9 0.9 0.0029 17.9 0.9 1.7 1 1 1 2 2 2 1 Altered inheritance of mitochondria protein 19 NTF2 PF02136.20 ORF100873 - 7.2e-26 91.1 0.0 8.1e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_2 PF12680.7 ORF100873 - 0.016 15.9 0.0 0.02 15.5 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain DUF4440 PF14534.6 ORF100873 - 0.17 12.3 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) Kelch_4 PF13418.6 ORF10046 - 3.3e-08 33.4 0.4 0.003 17.5 0.1 2.8 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF10046 - 0.00038 20.7 0.0 0.077 13.3 0.0 2.4 2 1 0 2 2 2 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF10046 - 0.00072 19.8 0.2 0.92 9.9 0.0 2.5 3 0 0 3 3 3 2 Kelch motif Kelch_5 PF13854.6 ORF10046 - 0.0063 16.5 1.0 0.027 14.5 0.2 2.3 3 0 0 3 3 3 1 Kelch motif Syja_N PF02383.18 NODE_50983_length_358_cov_1.374613_g43077_i0reverse_frame_1 - 0.00019 20.9 0.1 0.00025 20.5 0.1 1.2 1 0 0 1 1 1 1 SacI homology domain DPM2 PF07297.12 NODE_50978_length_358_cov_1.715170_g43072_i0forward_frame_1 - 0.11 12.8 0.5 0.11 12.8 0.5 1.6 2 0 0 2 2 2 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) PCNA_C PF02747.15 NODE_50967_length_358_cov_2.170279_g43061_i0reverse_frame_1 - 7.7e-10 39.0 0.4 1.1e-09 38.6 0.4 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain Leader_Erm PF08253.11 NODE_50967_length_358_cov_2.170279_g43061_i0forward_frame_1 - 0.2 11.9 0.4 0.2 11.9 0.4 2.3 3 0 0 3 3 3 0 Erm Leader peptide Fer4_5 PF12801.7 NODE_50962_length_358_cov_2.430341_g43056_i0reverse_frame_1 - 2.3e-15 56.3 0.5 2.3e-15 56.3 0.5 1.7 2 0 0 2 2 2 1 4Fe-4S binding domain YrhC PF14143.6 NODE_50962_length_358_cov_2.430341_g43056_i0reverse_frame_1 - 0.51 10.5 4.6 0.44 10.7 0.7 2.2 2 0 0 2 2 2 0 YrhC-like protein Equine_IAV_S2 PF06502.11 NODE_50961_length_358_cov_2.603715_g43055_i0reverse_frame_1 - 0.054 13.6 2.2 0.082 13.0 2.2 1.3 1 0 0 1 1 1 0 Equine infectious anaemia virus S2 protein Bee_toxin PF17454.2 NODE_50959_length_358_cov_2.832817_g43053_i0forward_frame_1 - 0.7 10.0 4.3 1.2 9.2 4.3 1.4 1 0 0 1 1 1 0 Honey bee toxin SLATT_6 PF18169.1 NODE_50953_length_358_cov_4.117647_g43047_i0forward_frame_1 - 0.017 14.7 1.7 3 7.4 0.2 2.1 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 Peptidase_M24 PF00557.24 NODE_50952_length_358_cov_4.123839_g43046_i0reverse_frame_1 - 1.7e-11 44.2 0.0 2e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF3793 PF12672.7 NODE_50952_length_358_cov_4.123839_g43046_i0reverse_frame_1 - 0.0016 18.6 0.0 0.0019 18.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3793) DUF2618 PF10940.8 NODE_50948_length_358_cov_33.086687_g43042_i0forward_frame_1 - 0.89 9.4 5.2 0.62 9.9 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) Tmemb_161AB PF10268.9 NODE_50946_length_358_cov_47.356037_g43040_i0forward_frame_1 - 0.03 13.0 4.0 0.03 13.0 4.0 1.1 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB CHASE9 PF17153.4 NODE_50941_length_358_cov_65.439628_g43035_i0reverse_frame_1 - 0.093 12.9 0.2 0.18 12.0 0.1 1.5 1 1 1 2 2 2 0 Periplasmic sensor domain, extracellular p450 PF00067.22 NODE_50940_length_358_cov_75.876161_g43034_i0reverse_frame_1 - 6.2e-15 54.9 0.2 7.2e-15 54.7 0.2 1.0 1 0 0 1 1 1 1 Cytochrome P450 Rhodanese PF00581.20 NODE_50937_length_358_cov_89.185759_g43031_i0reverse_frame_1 - 0.0016 18.9 0.0 0.0031 18.0 0.0 1.5 1 0 0 1 1 1 1 Rhodanese-like domain LAT PF15234.6 NODE_50937_length_358_cov_89.185759_g43031_i0reverse_frame_1 - 0.016 15.0 0.0 0.018 14.8 0.0 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells TTSSLRR PF12468.8 NODE_50937_length_358_cov_89.185759_g43031_i0reverse_frame_1 - 0.17 12.1 0.1 0.4 11.0 0.1 1.5 1 0 0 1 1 1 0 Type III secretion system leucine rich repeat protein Amastin PF07344.11 NODE_50936_length_358_cov_92.201238_g43030_i0reverse_frame_1 - 0.13 12.1 0.2 0.21 11.4 0.2 1.4 1 0 0 1 1 1 0 Amastin surface glycoprotein DUF5540 PF17694.1 NODE_50936_length_358_cov_92.201238_g43030_i0forward_frame_1 - 0.073 13.6 0.1 0.12 12.9 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5540) Bee_toxin PF17454.2 NODE_50931_length_358_cov_113.278638_g43025_i0forward_frame_1 - 4.2 7.5 5.7 3.1 7.9 0.5 2.3 2 0 0 2 2 2 0 Honey bee toxin DUF4118 PF13493.6 NODE_50919_length_358_cov_245.606811_g43013_i0reverse_frame_1 - 0.014 15.1 0.3 0.03 14.1 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) Xylo_C PF12529.8 NODE_50918_length_358_cov_277.294118_g43012_i0reverse_frame_1 - 0.092 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Xylosyltransferase C terminal Mif2_N PF15624.6 NODE_50918_length_358_cov_277.294118_g43012_i0forward_frame_1 - 0.22 12.2 0.9 0.24 12.1 0.9 1.2 1 0 0 1 1 1 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal Hamartin PF04388.12 NODE_50918_length_358_cov_277.294118_g43012_i0forward_frame_1 - 0.52 8.9 3.4 0.59 8.7 3.4 1.0 1 0 0 1 1 1 0 Hamartin protein Integrase_H2C2 PF17921.1 NODE_50914_length_358_cov_376.603715_g43009_i0forward_frame_1 - 0.35 11.0 4.4 6.8 6.9 0.1 3.0 3 0 0 3 3 3 0 Integrase zinc binding domain Ribosomal_S14 PF00253.21 NODE_50914_length_358_cov_376.603715_g43009_i0forward_frame_1 - 0.45 10.3 3.2 5.2 6.9 0.1 2.9 3 0 0 3 3 3 0 Ribosomal protein S14p/S29e TFB6 PF17110.5 NODE_50912_length_358_cov_629.941176_g43007_i0forward_frame_1 - 0.041 13.6 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH CbtB PF09489.10 NODE_50909_length_358_cov_14026.195046_g43004_i0reverse_frame_1 - 0.14 12.3 0.3 0.25 11.5 0.3 1.3 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtB) Peptidase_M14 PF00246.24 NODE_50904_length_359_cov_1.549383_g42999_i0reverse_frame_1 - 1.8e-09 37.8 0.0 2.1e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Zinc carboxypeptidase zf-DNL PF05180.12 NODE_50903_length_359_cov_1.675926_g42998_i0reverse_frame_1 - 0.015 15.2 0.3 0.022 14.7 0.3 1.3 1 0 0 1 1 1 0 DNL zinc finger Suf PF05843.14 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 0.14 12.1 12.4 0.14 12.2 12.4 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) Neur_chan_memb PF02932.16 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 0.81 9.7 4.3 0.74 9.8 4.3 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4834 PF16118.5 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 0.9 10.5 10.7 1.2 10.1 10.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Pex14_N PF04695.13 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 6.1 7.5 18.0 6.9 7.3 18.0 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Presenilin PF01080.17 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 6.2 5.5 12.7 6.7 5.4 12.7 1.0 1 0 0 1 1 1 0 Presenilin XPG_I PF00867.18 NODE_50896_length_359_cov_1.814815_g42991_i0forward_frame_1 - 3e-09 37.1 0.7 4.2e-09 36.6 0.7 1.3 1 0 0 1 1 1 1 XPG I-region MFS_1 PF07690.16 NODE_50882_length_359_cov_2.416667_g42977_i0forward_frame_1 - 4.2e-18 65.4 10.8 4.7e-18 65.2 10.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_50882_length_359_cov_2.416667_g42977_i0forward_frame_1 - 3.4e-10 39.4 1.0 3.6e-10 39.3 1.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.6 NODE_50882_length_359_cov_2.416667_g42977_i0forward_frame_1 - 0.0001 21.0 3.1 0.00011 20.9 3.1 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein TRI12 PF06609.13 NODE_50882_length_359_cov_2.416667_g42977_i0forward_frame_1 - 0.018 13.5 0.2 0.019 13.4 0.2 1.0 1 0 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) DUF417 PF04224.12 NODE_50880_length_359_cov_2.589506_g42975_i0forward_frame_1 - 0.2 11.2 0.0 0.28 10.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF417 CsrA PF02599.16 NODE_50878_length_359_cov_2.932099_g42973_i0reverse_frame_1 - 0.0057 16.6 1.0 0.01 15.8 1.0 1.4 1 0 0 1 1 1 1 Global regulator protein family Apis_Csd PF11671.8 NODE_50871_length_359_cov_4.024691_g42966_i0reverse_frame_1 - 0.04 13.9 1.5 0.05 13.6 1.5 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein OAD_gamma PF04277.13 NODE_50868_length_359_cov_13.206790_g42963_i0reverse_frame_1 - 0.017 15.7 0.5 0.028 15.0 0.5 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain PDDEXK_3 PF13366.6 NODE_50865_length_359_cov_44.225309_g42960_i0reverse_frame_1 - 0.011 16.0 1.4 0.016 15.5 1.4 1.4 1 1 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Mak16 PF04874.14 NODE_50865_length_359_cov_44.225309_g42960_i0reverse_frame_1 - 0.047 14.3 0.9 0.062 13.9 0.9 1.4 1 1 0 1 1 1 0 Mak16 protein C-terminal region Methyltransf_25 PF13649.6 NODE_50859_length_359_cov_59.552469_g42954_i0reverse_frame_1 - 0.014 16.1 0.0 0.018 15.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Orthopox_A36R PF05950.11 NODE_50852_length_359_cov_78.287037_g42947_i0reverse_frame_1 - 0.028 14.6 0.5 0.037 14.2 0.5 1.2 1 0 0 1 1 1 0 Orthopoxvirus A36R protein AgrB PF04647.15 NODE_50839_length_359_cov_120.851852_g42934_i0forward_frame_1 - 0.16 11.3 0.2 0.19 11.0 0.2 1.1 1 0 0 1 1 1 0 Accessory gene regulator B Dak1 PF02733.17 NODE_50831_length_359_cov_298.694444_g42926_i0reverse_frame_1 - 0.071 12.0 0.2 0.084 11.8 0.2 1.1 1 0 0 1 1 1 0 Dak1 domain DUF4628 PF15429.6 NODE_50831_length_359_cov_298.694444_g42926_i0forward_frame_1 - 0.16 11.7 0.9 0.51 10.0 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4628) DUF1682 PF07946.14 NODE_50830_length_359_cov_793.984568_g42925_i0reverse_frame_1 - 0.25 10.5 9.6 0.27 10.4 9.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Connexin PF00029.19 NODE_50830_length_359_cov_793.984568_g42925_i0reverse_frame_1 - 3.3 7.4 5.7 4.5 7.0 5.6 1.3 1 1 0 1 1 1 0 Connexin NACHT_N PF17100.5 NODE_50823_length_360_cov_1.707692_g42918_i0reverse_frame_1 - 0.15 11.9 2.6 0.17 11.7 2.6 1.1 1 0 0 1 1 1 0 N-terminal domain of NWD NACHT-NTPase EamA PF00892.20 NODE_50822_length_360_cov_1.735385_g42917_i0reverse_frame_1 - 1.3e-08 35.1 3.8 1.3e-08 35.1 3.8 2.0 2 0 0 2 2 2 1 EamA-like transporter family PUNUT PF16913.5 NODE_50822_length_360_cov_1.735385_g42917_i0reverse_frame_1 - 0.0026 17.0 1.9 0.0033 16.7 1.9 1.1 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport DUF1430 PF07242.11 NODE_50822_length_360_cov_1.735385_g42917_i0reverse_frame_1 - 0.0032 17.7 2.0 0.0032 17.7 2.0 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF1430) DUF1011 PF06237.12 NODE_50822_length_360_cov_1.735385_g42917_i0reverse_frame_1 - 0.2 12.0 3.7 0.11 12.9 1.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1011) COX2-transmemb PF09125.10 NODE_50819_length_360_cov_1.956923_g42914_i0forward_frame_1 - 0.064 13.1 0.6 0.12 12.1 0.1 1.8 2 0 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane He_PIG PF05345.12 NODE_50818_length_360_cov_1.956923_g42913_i0forward_frame_1 - 0.0015 18.7 1.4 0.022 14.9 0.3 2.7 2 1 0 2 2 2 1 Putative Ig domain Big_3_5 PF16640.5 NODE_50818_length_360_cov_1.956923_g42913_i0forward_frame_1 - 0.086 13.0 5.1 0.04 14.1 2.3 1.8 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 3) Arylsulfotran_2 PF14269.6 NODE_50813_length_360_cov_2.261538_g42908_i0forward_frame_1 - 0.14 11.5 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Arylsulfotransferase (ASST) zf_PR_Knuckle PF18445.1 NODE_50810_length_360_cov_3.052308_g42905_i0reverse_frame_1 - 0.051 13.4 0.2 0.095 12.5 0.2 1.4 1 0 0 1 1 1 0 PR zinc knuckle motif zf-SAP30 PF13866.6 NODE_50808_length_360_cov_3.240000_g42903_i0reverse_frame_1 - 0.79 9.9 4.5 5.1 7.3 0.3 2.3 1 1 1 2 2 2 0 SAP30 zinc-finger Tagatose_6_P_K PF08013.11 NODE_50803_length_360_cov_3.535385_g42898_i0forward_frame_1 - 3.7e-52 177.4 0.2 4.1e-52 177.3 0.2 1.0 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase R-HINP1I PF11463.8 NODE_50796_length_360_cov_50.147692_g42891_i0forward_frame_1 - 0.0033 16.9 1.1 0.0038 16.7 1.1 1.1 1 0 0 1 1 1 1 R.HinP1I restriction endonuclease Ribosomal_L6e PF01159.19 NODE_50796_length_360_cov_50.147692_g42891_i0forward_frame_1 - 0.011 16.2 4.5 0.016 15.7 4.5 1.3 1 0 0 1 1 1 0 Ribosomal protein L6e TRAP_beta PF05753.14 NODE_50794_length_360_cov_61.369231_g42889_i0forward_frame_1 - 0.16 11.3 0.0 0.21 11.0 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) DUF2288 PF10052.9 NODE_50794_length_360_cov_61.369231_g42889_i0forward_frame_1 - 0.18 11.9 0.0 0.39 10.8 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2288) Ribosomal_L28e PF01778.17 NODE_50778_length_360_cov_108.683077_g42873_i0forward_frame_1 - 1.1e-05 26.1 1.6 1.1e-05 26.1 1.6 1.6 1 1 0 1 1 1 1 Ribosomal L28e protein family RskA PF10099.9 NODE_50777_length_360_cov_110.652308_g42872_i0reverse_frame_1 - 0.065 13.5 0.5 0.067 13.5 0.5 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF525 PF04379.14 NODE_50775_length_360_cov_119.073846_g42870_i0reverse_frame_1 - 0.061 13.6 0.1 0.1 12.8 0.1 1.3 1 0 0 1 1 1 0 ApaG domain DUF4806 PF16064.5 NODE_50772_length_360_cov_147.190769_g42867_i0forward_frame_1 - 0.07 13.4 0.5 0.15 12.4 0.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4806) E3_binding PF02817.17 NODE_50764_length_360_cov_324.326154_g42859_i0forward_frame_1 - 0.1 12.9 0.4 0.25 11.7 0.4 1.7 1 0 0 1 1 1 0 e3 binding domain DUF1980 PF09323.10 NODE_50757_length_361_cov_1.202454_g42852_i0reverse_frame_3 - 0.076 12.9 1.7 0.1 12.5 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Cyclin PF08613.11 NODE_50756_length_361_cov_1.226994_g42851_i0reverse_frame_3 - 0.067 13.5 0.1 0.067 13.5 0.1 1.2 1 0 0 1 1 1 0 Cyclin PaO PF08417.12 NODE_50755_length_361_cov_1.429448_g42850_i0reverse_frame_2 - 0.019 15.1 0.6 0.025 14.7 0.6 1.2 1 0 0 1 1 1 0 Pheophorbide a oxygenase SF-assemblin PF06705.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 7.8e-07 28.7 11.7 1.1e-06 28.2 11.7 1.2 1 0 0 1 1 1 1 SF-assemblin/beta giardin DUF3450 PF11932.8 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.00046 19.6 7.4 0.00057 19.3 7.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) DUF2443 PF10398.9 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.0093 16.0 2.7 0.018 15.1 0.1 2.4 1 1 1 2 2 2 1 Protein of unknown function (DUF2443) Cytochrom_B562 PF07361.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.013 16.1 4.2 0.18 12.5 0.2 2.3 1 1 1 2 2 2 0 Cytochrome b562 zf-C4H2 PF10146.9 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.02 15.2 14.9 0.022 15.1 14.9 1.0 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4254 PF14063.6 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.029 14.2 5.5 0.041 13.7 0.4 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF4254) AIG1 PF04548.16 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.032 13.5 2.5 0.037 13.4 2.5 1.1 1 0 0 1 1 1 0 AIG1 family BCAS2 PF05700.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.038 13.7 5.8 0.039 13.6 0.2 2.1 1 1 1 2 2 2 0 Breast carcinoma amplified sequence 2 (BCAS2) 6PF2K PF01591.18 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.047 13.0 3.1 0.053 12.8 2.4 1.5 1 1 0 1 1 1 0 6-phosphofructo-2-kinase DUF4268 PF14088.6 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.094 12.6 6.9 0.42 10.5 1.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4268) dCache_2 PF08269.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.12 11.5 7.1 0.15 11.2 7.1 1.2 1 0 0 1 1 1 0 Cache domain Exonuc_VII_L PF02601.15 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.15 11.6 6.2 0.17 11.4 6.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3573 PF12097.8 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.33 9.7 1.4 0.34 9.7 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) Med2 PF11214.8 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.4 10.9 10.6 2 8.6 10.5 1.9 1 1 0 1 1 1 0 Mediator complex subunit 2 betaPIX_CC PF16523.5 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.95 9.3 12.1 1.1 9.2 7.7 2.8 1 1 1 2 2 2 0 betaPIX coiled coil DUF1640 PF07798.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 1.4 8.9 13.0 13 5.8 13.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) LMBR1 PF04791.16 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 2.5 6.9 7.1 2.7 6.8 7.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF1980 PF09323.10 NODE_50753_length_361_cov_1.530675_g42848_i0forward_frame_3 - 2.7 7.9 7.4 4.6 7.1 7.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) BPD_transp_2 PF02653.16 NODE_50746_length_361_cov_1.972393_g42841_i0forward_frame_3 - 9.8e-08 31.5 7.9 9.8e-08 31.5 7.9 1.8 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component LapA_dom PF06305.11 NODE_50746_length_361_cov_1.972393_g42841_i0forward_frame_3 - 0.29 11.0 2.8 0.89 9.4 2.8 1.9 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Troponin-I_N PF11636.8 NODE_50743_length_361_cov_2.220859_g42838_i0reverse_frame_2 - 1.6 8.7 8.5 0.31 11.0 3.3 2.2 2 0 0 2 2 2 0 Troponin I residues 1-32 DUF4222 PF13973.6 NODE_50741_length_361_cov_2.239264_g42836_i0forward_frame_3 - 8.5e-13 47.7 0.2 1.2e-12 47.2 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4222) Ketoacyl-synt_2 PF13723.6 NODE_50739_length_361_cov_2.407975_g42834_i0reverse_frame_3 - 0.056 13.1 0.1 0.072 12.7 0.1 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain GGDEF PF00990.21 NODE_50738_length_361_cov_2.542945_g42833_i0forward_frame_3 - 5.8e-23 81.4 0.0 6.7e-23 81.2 0.0 1.0 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 NODE_50738_length_361_cov_2.542945_g42833_i0forward_frame_3 - 0.048 13.9 0.0 0.063 13.5 0.0 1.2 1 0 0 1 1 1 0 GGDEF-like domain DsbG_N PF18257.1 NODE_50737_length_361_cov_2.592025_g42832_i0forward_frame_2 - 0.22 11.7 0.0 0.28 11.4 0.0 1.3 1 0 0 1 1 1 0 Disulfide isomerase DsbG N-terminal Radical_SAM PF04055.21 NODE_50734_length_361_cov_2.773006_g42829_i0reverse_frame_3 - 1.5e-06 28.7 0.0 1.8e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Radical SAM superfamily PapD_N PF00345.20 NODE_50732_length_361_cov_3.012270_g42827_i0forward_frame_2 - 8e-37 125.9 0.0 8.9e-37 125.8 0.0 1.0 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain Pkinase PF00069.25 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 4.3e-21 75.4 0.0 5e-21 75.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 1e-12 47.9 0.0 1.1e-12 47.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 0.0077 16.4 0.1 0.044 13.9 0.1 1.9 1 1 1 2 2 2 1 ABC1 family Haspin_kinase PF12330.8 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 0.013 14.5 0.0 0.016 14.2 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Pyr_redox_dim PF02852.22 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 0.062 13.6 0.0 0.077 13.3 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Kinase-like PF14531.6 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 0.073 12.4 0.0 0.086 12.1 0.0 1.1 1 0 0 1 1 1 0 Kinase-like FBA_3 PF08268.12 NODE_50730_length_361_cov_3.248466_g42825_i0reverse_frame_2 - 0.15 12.0 0.1 0.17 11.8 0.1 1.1 1 0 0 1 1 1 0 F-box associated domain Invasin_D3 PF09134.10 NODE_50730_length_361_cov_3.248466_g42825_i0forward_frame_2 - 5.1e-08 33.1 2.4 2.3e-06 27.8 0.7 2.4 1 1 1 2 2 2 2 Invasin, domain 3 Big_1 PF02369.16 NODE_50730_length_361_cov_3.248466_g42825_i0forward_frame_2 - 7.8e-05 22.6 0.3 0.0056 16.7 0.0 2.6 2 0 0 2 2 2 1 Bacterial Ig-like domain (group 1) Big_6 PF17936.1 NODE_50730_length_361_cov_3.248466_g42825_i0forward_frame_2 - 0.0016 18.7 0.6 0.1 12.9 0.1 2.4 2 1 0 2 2 2 1 Bacterial Ig domain Glyco_hydro2_C5 PF18565.1 NODE_50730_length_361_cov_3.248466_g42825_i0forward_frame_2 - 0.013 15.4 0.1 3.9 7.4 0.0 2.3 2 1 0 2 2 2 0 Glycoside hydrolase family 2 C-terminal domain 5 Dev_Cell_Death PF10539.9 NODE_50729_length_361_cov_3.273006_g42824_i0reverse_frame_3 - 0.078 12.9 0.0 0.093 12.6 0.0 1.1 1 0 0 1 1 1 0 Development and cell death domain DUF1754 PF08555.10 NODE_50727_length_361_cov_3.757669_g42822_i0forward_frame_3 - 0.058 14.2 9.1 0.12 13.1 9.1 1.6 1 1 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) KAAG1 PF15354.6 NODE_50726_length_361_cov_6.751534_g42821_i0reverse_frame_3 - 0.068 13.7 1.6 0.13 12.8 1.0 1.7 1 1 1 2 2 2 0 Kidney-associated antigen 1 Tyosinase_C PF18132.1 NODE_50721_length_361_cov_48.147239_g42816_i0reverse_frame_2 - 0.022 15.4 0.3 0.024 15.3 0.3 1.2 1 0 0 1 1 1 0 Tyosinase C-terminal domain Sec62 PF03839.16 NODE_50719_length_361_cov_53.987730_g42814_i0reverse_frame_2 - 1.6 8.2 9.5 1.1 8.7 8.4 1.3 1 1 0 1 1 1 0 Translocation protein Sec62 Tubulin PF00091.25 NODE_50719_length_361_cov_53.987730_g42814_i0forward_frame_3 - 0.064 13.4 0.0 0.079 13.2 0.0 1.1 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain Peptidase_S9 PF00326.21 NODE_50713_length_361_cov_72.361963_g42808_i0reverse_frame_2 - 0.003 17.1 0.0 0.0032 17.0 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF1150 PF06620.11 NODE_50713_length_361_cov_72.361963_g42808_i0reverse_frame_2 - 0.041 14.0 0.0 0.07 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1150) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks193.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks193.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks193.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks193.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:57:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TT1725 PF18324.1 NODE_50711_length_361_cov_73.834356_g42806_i0forward_frame_2 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Hypothetical protein TT1725 DUF2405 PF10293.9 NODE_50706_length_361_cov_78.226994_g42801_i0reverse_frame_2 - 0.024 14.6 0.1 0.028 14.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2405) NADH_oxidored PF08040.11 NODE_50703_length_361_cov_83.819018_g42798_i0forward_frame_3 - 0.07 12.8 0.2 0.11 12.2 0.2 1.3 1 0 0 1 1 1 0 MNLL subunit Acyl-thio_N PF12590.8 NODE_50702_length_361_cov_92.300613_g42797_i0forward_frame_3 - 0.075 13.6 0.1 0.094 13.3 0.1 1.1 1 0 0 1 1 1 0 Acyl-ATP thioesterase SsgA PF04686.12 NODE_50696_length_361_cov_116.978528_g42791_i0forward_frame_3 - 0.025 14.6 0.2 1.1 9.3 0.1 2.1 1 1 1 2 2 2 0 Streptomyces sporulation and cell division protein, SsgA DUF2227 PF09988.9 NODE_50689_length_361_cov_186.015337_g42784_i0reverse_frame_3 - 0.058 13.3 0.1 0.065 13.1 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized metal-binding protein (DUF2227) Transferrin PF00405.17 NODE_50689_length_361_cov_186.015337_g42784_i0reverse_frame_2 - 0.055 12.6 0.0 0.077 12.1 0.0 1.2 1 0 0 1 1 1 0 Transferrin MIF4G PF02854.19 NODE_50673_length_362_cov_1.100917_g42769_i0forward_frame_3 - 0.043 13.5 0.6 0.053 13.2 0.6 1.0 1 0 0 1 1 1 0 MIF4G domain BCHF PF07284.11 NODE_50671_length_362_cov_1.308869_g42767_i0forward_frame_3 - 0.0051 16.8 0.1 0.0064 16.5 0.1 1.2 1 0 0 1 1 1 1 2-vinyl bacteriochlorophyllide hydratase (BCHF) Pho86 PF11124.8 NODE_50671_length_362_cov_1.308869_g42767_i0forward_frame_3 - 0.028 13.9 0.2 0.031 13.7 0.2 1.0 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 DNA_pol3_a_NII PF11490.8 NODE_50669_length_362_cov_1.703364_g42765_i0reverse_frame_2 - 0.0025 17.7 0.7 0.0036 17.2 0.7 1.2 1 0 0 1 1 1 1 DNA polymerase III polC-type N-terminus II Josephin PF02099.17 NODE_50668_length_362_cov_1.761468_g42764_i0reverse_frame_2 - 1.4e-07 31.7 0.1 3.6e-07 30.4 0.0 1.6 2 0 0 2 2 2 1 Josephin G10 PF01125.17 NODE_50668_length_362_cov_1.761468_g42764_i0reverse_frame_2 - 0.025 14.4 0.3 0.097 12.4 0.0 1.9 2 0 0 2 2 2 0 G10 protein DUF4467 PF14729.6 NODE_50668_length_362_cov_1.761468_g42764_i0reverse_frame_2 - 0.075 13.4 0.0 0.15 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function with cystatin-like fold (DUF4467) WD40 PF00400.32 NODE_50667_length_362_cov_1.883792_g42763_i0forward_frame_2 - 4.6e-06 27.3 0.0 0.0008 20.2 0.0 2.6 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_50667_length_362_cov_1.883792_g42763_i0forward_frame_2 - 0.0024 18.2 0.0 0.0049 17.1 0.0 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain DNA_pol3_delta2 PF13177.6 NODE_50666_length_362_cov_1.920489_g42762_i0reverse_frame_2 - 0.11 12.2 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Copine PF07002.16 NODE_50663_length_362_cov_1.975535_g42759_i0forward_frame_3 - 3.3e-08 33.3 0.1 4.1e-08 32.9 0.1 1.1 1 0 0 1 1 1 1 Copine EPSP_synthase PF00275.20 NODE_50657_length_362_cov_2.235474_g42753_i0forward_frame_2 - 1.9e-31 109.2 0.1 2e-31 109.1 0.1 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Nitrate_red_del PF02613.15 NODE_50655_length_362_cov_2.443425_g42751_i0forward_frame_3 - 0.01 15.9 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 0 Nitrate reductase delta subunit DUF5431 PF17496.2 NODE_50653_length_362_cov_2.495413_g42749_i0reverse_frame_3 - 4.3e-07 30.0 0.0 9e-07 28.9 0.0 1.5 1 1 1 2 2 2 1 Family of unknown function (DUF5431) Ribosomal_L41 PF05162.13 NODE_50653_length_362_cov_2.495413_g42749_i0forward_frame_3 - 0.044 13.8 1.9 0.044 13.8 1.9 1.8 2 0 0 2 2 2 0 Ribosomal protein L41 Cmc1 PF08583.10 NODE_50653_length_362_cov_2.495413_g42749_i0forward_frame_2 - 0.13 12.3 0.3 0.2 11.7 0.3 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like Osw5 PF17062.5 NODE_50649_length_362_cov_2.724771_g42745_i0reverse_frame_2 - 0.11 12.6 3.4 0.13 12.4 0.1 2.1 1 1 1 2 2 2 0 Outer spore wall 5 Myb_DNA-binding PF00249.31 NODE_50649_length_362_cov_2.724771_g42745_i0forward_frame_3 - 1.1e-18 67.2 1.0 3.1e-15 56.1 0.2 2.2 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_50649_length_362_cov_2.724771_g42745_i0forward_frame_3 - 2.4e-16 59.7 4.4 2.5e-09 37.2 0.4 2.1 1 1 1 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_50649_length_362_cov_2.724771_g42745_i0forward_frame_3 - 0.00034 20.4 0.1 0.00044 20.1 0.1 1.4 1 0 0 1 1 1 1 Myb DNA-binding like DUF3212 PF11486.8 NODE_50647_length_362_cov_2.883792_g42743_i0forward_frame_2 - 0.0049 16.9 0.6 0.006 16.6 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3212) MIR PF02815.19 NODE_50646_length_362_cov_3.382263_g42742_i0forward_frame_2 - 0.041 13.7 0.2 0.046 13.6 0.2 1.1 1 0 0 1 1 1 0 MIR domain zf-C2H2 PF00096.26 NODE_50645_length_362_cov_4.501529_g42741_i0forward_frame_3 - 4.6e-09 36.2 5.3 0.00025 21.3 0.9 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_50645_length_362_cov_4.501529_g42741_i0forward_frame_3 - 0.0011 19.6 9.6 0.044 14.6 0.7 2.8 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_aberr PF17017.5 NODE_50645_length_362_cov_4.501529_g42741_i0forward_frame_3 - 0.0022 18.2 2.0 0.0046 17.1 0.1 2.1 2 1 1 3 3 3 1 Aberrant zinc-finger zf-met PF12874.7 NODE_50645_length_362_cov_4.501529_g42741_i0forward_frame_3 - 0.01 16.2 2.6 0.43 11.0 0.4 2.7 2 0 0 2 2 2 0 Zinc-finger of C2H2 type FOXP-CC PF16159.5 NODE_50645_length_362_cov_4.501529_g42741_i0forward_frame_3 - 0.054 14.1 2.5 0.21 12.2 0.3 2.1 1 1 0 2 2 2 0 FOXP coiled-coil domain zf-H2C2_5 PF13909.6 NODE_50645_length_362_cov_4.501529_g42741_i0forward_frame_3 - 0.054 13.3 2.0 0.075 12.8 0.8 1.9 2 0 0 2 2 2 0 C2H2-type zinc-finger domain zf-C2HC_2 PF13913.6 NODE_50645_length_362_cov_4.501529_g42741_i0forward_frame_3 - 0.062 13.2 1.1 6.7 6.7 0.1 2.7 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-H2C2_2 PF13465.6 NODE_50645_length_362_cov_4.501529_g42741_i0forward_frame_3 - 0.34 11.4 11.3 4 8.0 0.1 3.6 3 0 0 3 3 3 0 Zinc-finger double domain MSV199 PF10553.9 NODE_50643_length_362_cov_19.868502_g42739_i0reverse_frame_2 - 0.034 14.4 8.4 0.043 14.1 8.4 1.1 1 0 0 1 1 1 0 MSV199 domain AAA_7 PF12775.7 NODE_50642_length_362_cov_34.073394_g42738_i0reverse_frame_2 - 0.0092 15.5 2.6 0.011 15.3 2.6 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region C_GCAxxG_C_C PF09719.10 NODE_50642_length_362_cov_34.073394_g42738_i0reverse_frame_2 - 0.16 12.2 0.5 0.22 11.8 0.5 1.4 1 1 0 1 1 1 0 Putative redox-active protein (C_GCAxxG_C_C) PPR_long PF17177.4 NODE_50641_length_362_cov_43.483180_g42737_i0reverse_frame_2 - 1.4e-09 37.7 0.3 1.6e-09 37.5 0.3 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 NODE_50641_length_362_cov_43.483180_g42737_i0reverse_frame_2 - 0.12 12.4 0.0 6.7 6.9 0.0 2.7 1 1 3 4 4 4 0 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_50641_length_362_cov_43.483180_g42737_i0reverse_frame_2 - 0.13 12.5 0.0 2.7 8.3 0.0 2.2 2 0 0 2 2 2 0 PPR repeat family TPR_4 PF07721.14 NODE_50641_length_362_cov_43.483180_g42737_i0reverse_frame_2 - 0.54 11.1 18.5 8.2 7.4 0.1 4.1 4 1 0 4 4 4 0 Tetratricopeptide repeat Tropomyosin_1 PF12718.7 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.0026 17.9 4.2 0.0037 17.4 4.2 1.1 1 0 0 1 1 1 1 Tropomyosin like GAS PF13851.6 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.009 15.4 9.2 0.011 15.1 9.2 1.2 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding FlxA PF14282.6 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.011 15.7 8.3 0.11 12.5 1.7 2.2 1 1 1 2 2 2 0 FlxA-like protein Baculo_PEP_C PF04513.12 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.078 13.0 2.3 0.31 11.1 2.1 1.8 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus GTP-bdg_M PF16360.5 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.31 11.7 3.2 0.34 11.5 1.6 1.8 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region XhlA PF10779.9 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 1.9 8.7 5.7 18 5.6 1.0 2.6 2 1 0 2 2 2 0 Haemolysin XhlA Gaa1 PF04114.14 NODE_50637_length_362_cov_51.605505_g42733_i0forward_frame_3 - 1.1 8.3 8.9 1.2 8.0 8.9 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component Baculo_gp64 PF03273.13 NODE_50637_length_362_cov_51.605505_g42733_i0forward_frame_2 - 0.089 11.6 0.8 0.1 11.4 0.8 1.1 1 0 0 1 1 1 0 Baculovirus gp64 envelope glycoprotein family MORN PF02493.20 NODE_50624_length_362_cov_130.272171_g42720_i0reverse_frame_3 - 2.4e-12 46.0 12.1 7.4e-07 28.7 0.3 2.8 3 0 0 3 3 3 2 MORN repeat DUF4838 PF16126.5 NODE_50624_length_362_cov_130.272171_g42720_i0reverse_frame_2 - 0.02 14.3 1.0 0.02 14.3 1.0 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4838) LSM PF01423.22 NODE_50614_length_362_cov_290.932722_g42710_i0forward_frame_2 - 1.8e-12 46.7 0.1 2.4e-12 46.4 0.1 1.2 1 0 0 1 1 1 1 LSM domain LpxI_N PF17930.1 NODE_50612_length_362_cov_338.862385_g42708_i0reverse_frame_3 - 0.078 12.9 0.0 0.099 12.5 0.0 1.1 1 0 0 1 1 1 0 LpxI N-terminal domain EVC2_like PF12297.8 NODE_50611_length_362_cov_339.321101_g42707_i0forward_frame_3 - 0.37 9.4 1.5 0.46 9.1 1.5 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein CheW PF01584.19 NODE_50602_length_363_cov_1.167683_g42698_i0reverse_frame_2 - 0.18 11.5 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 CheW-like domain DNA_methylase PF00145.17 NODE_50601_length_363_cov_1.503049_g42697_i0forward_frame_3 - 3e-09 36.7 0.0 3.7e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase DUF1122 PF06557.11 NODE_50598_length_363_cov_1.737805_g42694_i0forward_frame_3 - 0.095 12.1 0.1 0.14 11.6 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1122) GHMP_kinases_C PF08544.13 NODE_50595_length_363_cov_1.963415_g42691_i0reverse_frame_2 - 3.1 8.2 4.4 3.1 8.2 2.6 1.7 2 0 0 2 2 2 0 GHMP kinases C terminal TMEM247 PF15444.6 NODE_50595_length_363_cov_1.963415_g42691_i0forward_frame_2 - 0.15 12.1 0.1 0.2 11.7 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 247 Fer4 PF00037.27 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 5.1e-11 41.9 15.8 0.0001 22.0 2.9 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.3e-10 41.3 8.2 8.9e-06 25.8 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 7.7e-10 39.2 8.2 7.3e-05 23.3 2.4 2.5 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.6e-08 34.3 17.8 1.5e-05 24.8 3.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 3.2e-08 33.5 26.8 9.3e-07 28.9 15.6 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 3.4e-08 33.5 10.9 3.4e-08 33.5 10.9 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 5.6e-07 30.0 12.6 0.011 16.3 6.7 2.9 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.8e-06 28.0 18.3 0.0013 19.1 1.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 4.2e-06 26.9 14.3 0.00027 21.1 10.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 4.9e-06 26.3 19.9 0.00024 21.0 2.2 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_5 PF12801.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.3e-05 25.0 0.4 1.3e-05 25.0 0.4 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.4e-05 25.4 15.9 0.003 18.0 1.6 2.6 1 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 3e-05 24.6 21.1 0.021 15.7 6.2 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 0.00011 23.0 16.2 0.14 13.1 3.3 3.1 2 1 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 0.0027 18.5 10.8 0.027 15.3 0.4 2.4 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 0.021 15.4 17.7 0.34 11.5 4.0 2.9 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I DUF3592 PF12158.8 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 0.12 12.5 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) Fer4_15 PF13459.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.1 10.0 11.6 1.6 9.5 1.1 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fimbrial PF00419.20 NODE_50589_length_363_cov_2.070122_g42685_i0forward_frame_3 - 2.7e-15 56.9 3.6 3.2e-15 56.7 3.6 1.1 1 0 0 1 1 1 1 Fimbrial protein FimA PF16970.5 NODE_50589_length_363_cov_2.070122_g42685_i0forward_frame_3 - 0.012 15.7 1.4 0.02 15.1 0.6 1.7 1 1 1 2 2 2 0 Type-1 fimbrial protein, A NitrOD1 PF18549.1 NODE_50586_length_363_cov_2.103659_g42682_i0reverse_frame_2 - 0.14 12.2 0.1 0.23 11.4 0.1 1.4 1 0 0 1 1 1 0 Nitrosopumilus output domain 1 Fe_dep_repress PF01325.19 NODE_50586_length_363_cov_2.103659_g42682_i0forward_frame_3 - 0.00069 19.8 0.0 0.0011 19.1 0.0 1.2 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 NODE_50586_length_363_cov_2.103659_g42682_i0forward_frame_3 - 0.0024 17.7 0.0 0.0035 17.2 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 NODE_50586_length_363_cov_2.103659_g42682_i0forward_frame_3 - 0.0055 16.6 0.1 0.0078 16.1 0.1 1.2 1 0 0 1 1 1 1 MarR family Neurensin PF14927.6 NODE_50583_length_363_cov_2.189024_g42679_i0forward_frame_3 - 0.24 11.1 2.5 0.48 10.1 2.5 1.5 1 0 0 1 1 1 0 Neurensin 17kDa_Anti_2 PF16998.5 NODE_50580_length_363_cov_2.429878_g42676_i0reverse_frame_3 - 0.12 12.3 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 17 kDa outer membrane surface antigen MatP_C PF17414.2 NODE_50580_length_363_cov_2.429878_g42676_i0forward_frame_3 - 0.026 14.7 0.0 0.086 13.0 0.0 1.8 1 1 1 2 2 2 0 MatP C-terminal ribbon-helix-helix domain CW_7 PF08230.11 NODE_50580_length_363_cov_2.429878_g42676_i0forward_frame_3 - 0.16 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 CW_7 repeat Peptidase_C2 PF00648.21 NODE_50578_length_363_cov_2.500000_g42674_i0reverse_frame_2 - 3.4e-32 111.7 0.0 3.6e-32 111.6 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Pkinase PF00069.25 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 1.1e-28 100.4 0.2 1.2e-28 100.3 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 1.2e-12 47.7 0.0 1.5e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Choline_kinase PF01633.20 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 0.00066 19.3 1.8 0.018 14.6 1.1 2.1 1 1 1 2 2 2 2 Choline/ethanolamine kinase APH PF01636.23 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 0.05 13.5 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 0.053 12.9 0.1 0.061 12.7 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 0.066 12.8 0.1 0.071 12.7 0.1 1.2 1 0 0 1 1 1 0 RIO1 family PalH PF08733.10 NODE_50575_length_363_cov_2.710366_g42671_i0forward_frame_3 - 0.0029 16.7 1.7 0.0032 16.5 1.7 1.0 1 0 0 1 1 1 1 PalH/RIM21 Kazal_2 PF07648.15 NODE_50568_length_363_cov_3.435976_g42664_i0forward_frame_2 - 0.48 10.6 5.2 0.89 9.7 5.2 1.4 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain AAA_7 PF12775.7 NODE_50564_length_363_cov_44.082317_g42660_i0forward_frame_3 - 0.035 13.6 0.3 0.069 12.7 0.4 1.5 2 0 0 2 2 2 0 P-loop containing dynein motor region PhnA_Zn_Ribbon PF08274.12 NODE_50564_length_363_cov_44.082317_g42660_i0forward_frame_2 - 0.068 13.1 0.7 5.9 6.9 0.0 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon ABC_membrane PF00664.23 NODE_50560_length_363_cov_61.201220_g42656_i0reverse_frame_3 - 7.8e-06 25.7 0.4 1.2e-05 25.1 0.3 1.3 1 1 0 1 1 1 1 ABC transporter transmembrane region YMF19 PF02326.15 NODE_50560_length_363_cov_61.201220_g42656_i0forward_frame_2 - 0.89 10.4 7.0 0.31 11.9 1.9 2.2 1 1 1 2 2 2 0 Plant ATP synthase F0 SpoU_methylase PF00588.19 NODE_50551_length_363_cov_73.789634_g42647_i1reverse_frame_3 - 0.0074 16.5 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family PsbK PF02533.15 NODE_50551_length_363_cov_73.789634_g42647_i1forward_frame_2 - 3.8 7.7 6.4 5.7 7.2 5.5 1.8 2 0 0 2 2 2 0 Photosystem II 4 kDa reaction centre component SpoU_methylase PF00588.19 NODE_50550_length_363_cov_73.820122_g42647_i0reverse_frame_3 - 0.0075 16.4 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family Nrf1_DNA-bind PF10491.9 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_2 - 0.038 13.7 3.9 0.047 13.4 3.9 1.1 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 EamA PF00892.20 NODE_50546_length_363_cov_77.926829_g42643_i0reverse_frame_2 - 6e-10 39.4 0.4 9.6e-10 38.8 0.4 1.3 1 0 0 1 1 1 1 EamA-like transporter family Mg_trans_NIPA PF05653.14 NODE_50546_length_363_cov_77.926829_g42643_i0reverse_frame_2 - 0.046 12.8 0.1 0.052 12.6 0.1 1.1 1 0 0 1 1 1 0 Magnesium transporter NIPA EmrE PF13536.6 NODE_50546_length_363_cov_77.926829_g42643_i0reverse_frame_2 - 0.049 13.2 0.9 0.22 11.1 0.6 1.8 1 1 1 2 2 2 0 Putative multidrug resistance efflux transporter DUF5472 PF17566.2 NODE_50541_length_363_cov_82.631098_g42638_i0reverse_frame_3 - 0.091 12.7 0.3 0.18 11.8 0.3 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5472) INO80_Ies4 PF08193.11 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 0.049 13.6 11.5 0.057 13.4 11.5 1.0 1 0 0 1 1 1 0 INO80 complex subunit Ies4 DUF913 PF06025.12 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 1 8.3 8.0 1.1 8.2 8.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) HGTP_anticodon2 PF12745.7 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 1 8.8 18.0 1.1 8.7 18.0 1.0 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs AAA_11 PF13086.6 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 5.2 6.8 16.3 6 6.6 16.3 1.0 1 0 0 1 1 1 0 AAA domain HSP70 PF00012.20 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 5.6 5.0 14.6 6.4 4.8 14.6 1.0 1 0 0 1 1 1 0 Hsp70 protein DDHD PF02862.17 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 7.7 6.6 11.8 8.5 6.5 11.8 1.1 1 0 0 1 1 1 0 DDHD domain DUF1168 PF06658.12 NODE_50536_length_363_cov_93.192073_g42633_i0reverse_frame_3 - 0.77 9.6 14.7 1.1 9.1 14.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Hex_IIIa PF02455.16 NODE_50535_length_363_cov_102.652439_g42632_i0reverse_frame_2 - 0.011 14.6 0.2 0.011 14.5 0.2 1.0 1 0 0 1 1 1 0 Hexon-associated protein (IIIa) FOG_N PF15888.5 NODE_50534_length_363_cov_104.551829_g42631_i0forward_frame_3 - 0.14 12.5 0.4 0.32 11.4 0.4 1.5 1 1 0 1 1 1 0 Folded gastrulation N-terminus HU-CCDC81_bac_1 PF18174.1 NODE_50529_length_363_cov_144.868902_g42626_i0reverse_frame_3 - 0.00057 19.7 0.1 4.7 7.2 0.0 3.2 2 1 1 3 3 3 3 CCDC81-like prokaryotic HU domain 1 lci PF12197.8 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_3 - 3.4 7.5 4.9 37 4.2 0.1 3.8 5 0 0 5 5 5 0 Bacillus cereus group antimicrobial protein ESPR PF13018.6 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_3 - 4.6 7.1 5.2 66 3.4 0.1 4.1 5 0 0 5 5 5 0 Extended Signal Peptide of Type V secretion system Toxin_19 PF08088.12 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_2 - 0.15 12.2 1.0 20 5.4 0.1 2.4 2 0 0 2 2 2 0 Conotoxin I-superfamily DUF1963 PF09234.10 NODE_50524_length_363_cov_244.475610_g42621_i0reverse_frame_3 - 0.045 14.2 2.1 0.051 14.0 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1963) Fungal_trans_2 PF11951.8 NODE_50521_length_363_cov_287.429878_g42618_i0forward_frame_2 - 0.0058 15.5 0.6 0.0064 15.3 0.6 1.1 1 0 0 1 1 1 1 Fungal specific transcription factor domain HCV_NS2 PF01538.18 NODE_50521_length_363_cov_287.429878_g42618_i0forward_frame_2 - 0.017 14.8 0.6 0.02 14.6 0.6 1.0 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 EFP_N PF08207.12 ORF99311 - 9.5e-06 25.6 0.0 2.1e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain SBF2 PF12335.8 ORF99069 - 0.00013 21.7 0.0 0.00013 21.7 0.0 1.2 1 0 0 1 1 1 1 Myotubularin protein HypA PF01155.19 ORF97163 - 7.6e-29 100.0 7.1 8.4e-29 99.9 7.1 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbons_6 PF07191.12 ORF97163 - 0.019 14.9 6.3 0.019 14.9 6.3 1.9 2 0 0 2 2 2 0 zinc-ribbons zinc_ribbon_9 PF14369.6 ORF97163 - 0.024 14.9 4.7 0.061 13.6 4.0 2.1 2 0 0 2 2 2 0 zinc-ribbon zf-B_box PF00643.24 ORF97163 - 0.2 11.9 6.9 0.67 10.2 3.5 2.6 2 0 0 2 2 2 0 B-box zinc finger GRDP-like PF07173.12 ORF96568 - 0.02 15.6 8.8 0.042 14.5 0.5 2.1 1 1 1 2 2 2 0 Glycine-rich domain-containing protein-like DUF4187 PF13821.6 ORF96568 - 0.066 13.0 0.7 0.12 12.2 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) ALG11_N PF15924.5 ORF96300 - 2e-17 64.0 4.5 8.7e-12 45.5 1.0 2.1 1 1 1 2 2 2 2 ALG11 mannosyltransferase N-terminus PAZ_siRNAbind PF12212.8 ORF96300 - 0.012 15.5 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 PAZ domain Glyco_transf_4 PF13439.6 ORF96300 - 0.018 15.0 0.2 0.024 14.7 0.2 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 DUF202 PF02656.15 ORF95174 - 8.3e-10 39.0 2.8 8.3e-10 39.0 2.8 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF202) Frag1 PF10277.9 ORF95174 - 0.03 13.9 5.8 0.038 13.5 5.8 1.1 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family SSB PF00436.25 ORF94877 - 0.16 12.1 0.2 0.21 11.7 0.2 1.1 1 0 0 1 1 1 0 Single-strand binding protein family Phage_holin_2_3 PF16080.5 ORF94196 - 0.16 11.7 3.9 2.2 8.1 0.1 2.4 2 0 0 2 2 2 0 Bacteriophage holin family HP1 zf-RanBP PF00641.18 ORF94085 - 0.00044 19.5 1.6 0.00044 19.5 1.6 2.3 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others zf-Sec23_Sec24 PF04810.15 ORF94085 - 0.0086 16.1 8.6 0.53 10.4 0.3 3.2 2 1 1 3 3 3 2 Sec23/Sec24 zinc finger Zn_ribbon_SprT PF17283.2 ORF94085 - 0.0095 15.8 5.0 9 6.3 0.0 3.7 3 1 0 3 3 3 2 SprT-like zinc ribbon domain PHD_2 PF13831.6 ORF94085 - 0.027 14.0 9.6 0.28 10.8 0.6 2.9 3 0 0 3 3 3 0 PHD-finger C1_2 PF03107.16 ORF94085 - 0.03 14.7 5.4 0.16 12.3 1.0 2.4 2 0 0 2 2 2 0 C1 domain zf-C2H2_3rep PF18868.1 ORF94085 - 0.18 12.4 0.6 2.3 8.9 0.1 2.1 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats PHD PF00628.29 ORF94085 - 0.37 10.7 10.3 5.1 7.1 0.6 3.1 2 1 1 3 3 3 0 PHD-finger Vps36-NZF-N PF16988.5 ORF94085 - 0.77 9.2 5.2 4.7 6.7 0.4 2.5 2 1 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain DUF1932 PF09130.11 ORF94083 - 0.1 12.6 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) zf-RING_2 PF13639.6 ORF93976 - 4.3e-13 49.4 11.2 5.9e-13 48.9 11.2 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF93976 - 2.6e-08 33.5 10.1 4.8e-08 32.6 10.1 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF93976 - 4.3e-08 33.3 11.8 1e-07 32.1 11.8 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF93976 - 2e-06 27.6 9.8 3e-06 27.0 9.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF93976 - 8.2e-06 25.6 8.4 1.1e-05 25.2 8.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF93976 - 6.1e-05 22.9 10.2 8.6e-05 22.4 10.2 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF93976 - 8.6e-05 22.5 6.6 0.00015 21.7 6.6 1.4 1 0 0 1 1 1 1 RING-type zinc-finger FANCL_C PF11793.8 ORF93976 - 0.00012 22.1 10.3 0.0018 18.4 10.3 2.2 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 ORF93976 - 0.00019 21.2 11.7 0.0003 20.6 11.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF93976 - 0.00071 19.6 6.5 0.0034 17.4 6.5 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF93976 - 0.0029 17.4 6.4 0.005 16.7 6.4 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF93976 - 0.011 15.9 10.4 0.018 15.1 10.4 1.4 1 0 0 1 1 1 0 RING-variant domain Zn_ribbon_17 PF17120.5 ORF93976 - 0.019 14.6 8.9 0.13 11.9 9.3 1.9 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type Baculo_RING PF05883.11 ORF93976 - 0.14 12.1 4.4 0.16 11.9 4.4 1.3 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain CTU2 PF10288.9 ORF93976 - 0.21 11.8 5.0 1.8 8.9 5.0 2.0 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Prok-RING_1 PF14446.6 ORF93976 - 0.25 11.3 7.5 0.62 10.0 2.4 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Flavokinase PF01687.17 ORF93479 - 9.1e-20 71.0 0.0 1.1e-19 70.8 0.0 1.0 1 0 0 1 1 1 1 Riboflavin kinase POPLD PF08170.12 ORF93100 - 0.084 13.2 0.9 0.15 12.5 0.9 1.4 1 0 0 1 1 1 0 POPLD (NUC188) domain Ten1_2 PF15490.6 ORF92747 - 1.4e-10 40.9 0.0 1.6e-10 40.7 0.0 1.1 1 0 0 1 1 1 1 Telomere-capping, CST complex subunit Rep_fac-A_3 PF08661.11 ORF92747 - 3.5e-05 24.1 0.0 3.9e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Replication factor A protein 3 zf-LITAF-like PF10601.9 ORF92043 - 2.7e-15 56.4 0.5 3.6e-15 56.0 0.5 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Pox_A3L PF05288.11 ORF92043 - 0.016 15.2 0.3 2.5 8.1 0.0 2.6 3 0 0 3 3 3 0 Poxvirus A3L Protein PhnA_Zn_Ribbon PF08274.12 ORF92043 - 0.031 14.2 0.2 1.1 9.3 0.1 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon ZirS_C PF16583.5 ORF92043 - 0.082 12.5 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Zinc-regulated secreted antivirulence protein C-terminal domain DUF4179 PF13786.6 ORF90638 - 0.047 14.2 0.2 0.062 13.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) Pterin_4a PF01329.19 ORF90638 - 0.075 13.2 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase Coat_F PF07875.12 ORF90320 - 0.11 12.7 0.7 0.76 10.0 0.1 2.3 2 0 0 2 2 2 0 Coat F domain Abhydrolase_3 PF07859.13 ORF87115 - 1.3e-14 54.6 0.0 1.4e-14 54.5 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Cyt_bd_oxida_II PF02322.15 ORF86598 - 0.0076 15.6 1.5 0.0083 15.5 1.5 1.1 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II Pkinase PF00069.25 ORF86470 - 0.0007 19.0 0.0 0.00081 18.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Syntaxin PF00804.25 ORF8460 - 0.0013 18.5 0.1 0.0016 18.2 0.1 1.0 1 0 0 1 1 1 1 Syntaxin Noelin-1 PF12308.8 ORF8460 - 0.0057 16.6 0.7 0.0069 16.3 0.7 1.1 1 0 0 1 1 1 1 Neurogenesis glycoprotein CCCAP PF15964.5 ORF8460 - 0.0058 15.0 1.1 0.0067 14.8 1.1 1.0 1 0 0 1 1 1 1 Centrosomal colon cancer autoantigen protein family SF-assemblin PF06705.11 ORF8460 - 0.03 13.7 0.4 0.034 13.5 0.4 1.0 1 0 0 1 1 1 0 SF-assemblin/beta giardin BLOC1_2 PF10046.9 ORF8460 - 0.16 12.3 2.2 0.22 11.8 2.2 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF3704 PF12488.8 ORF8460 - 0.28 10.9 2.5 0.78 9.5 2.5 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3704) Perilipin PF03036.16 ORF8460 - 0.28 10.1 4.3 0.54 9.2 4.3 1.4 1 1 0 1 1 1 0 Perilipin family CS PF04969.16 ORF84501 - 5.5e-08 33.7 9.1 1.1e-07 32.7 9.1 1.5 1 1 0 1 1 1 1 CS domain RepA_N PF06970.11 ORF84501 - 0.21 11.5 3.7 8.5 6.4 0.3 2.3 1 1 1 2 2 2 0 Replication initiator protein A (RepA) N-terminus FYRN PF05964.14 ORF84271 - 0.27 11.1 0.2 0.27 11.1 0.2 1.8 2 0 0 2 2 2 0 F/Y-rich N-terminus DUF3418 PF11898.8 ORF83850 - 0.021 13.6 0.0 0.023 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) DUF4179 PF13786.6 ORF8253 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF8253 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF8253 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF8253 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus Abi_C PF14355.6 ORF82504 - 0.16 12.1 0.2 0.25 11.5 0.2 1.3 1 0 0 1 1 1 0 Abortive infection C-terminus MORN PF02493.20 ORF82198 - 1.4e-27 93.9 31.7 4.6e-09 35.6 2.2 6.0 6 0 0 6 6 6 5 MORN repeat DUF3048_C PF17479.2 ORF82198 - 0.07 13.5 6.0 0.076 13.4 1.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Vps36_ESCRT-II PF11605.8 ORF82198 - 0.24 11.6 1.1 0.33 11.2 0.1 1.7 2 1 0 2 2 2 0 Vacuolar protein sorting protein 36 Vps36 BTB PF00651.31 ORF82018 - 0.00012 22.3 2.0 0.00034 20.8 0.2 2.0 2 0 0 2 2 2 1 BTB/POZ domain Cullin_Nedd8 PF10557.9 ORF81477 - 0.016 15.2 1.5 0.072 13.1 1.5 2.2 1 1 0 1 1 1 0 Cullin protein neddylation domain DUF4179 PF13786.6 ORF80986 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF80986 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF80986 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF80986 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus Laterosporulin PF17861.1 ORF80491 - 0.0062 16.9 0.0 0.01 16.2 0.0 1.4 1 0 0 1 1 1 1 Laterosporulin defensin-like peptide Circo_capsid PF02443.15 ORF80491 - 5.8 6.4 13.4 6.7 6.2 13.4 1.1 1 0 0 1 1 1 0 Circovirus capsid protein DUF4041 PF13250.6 ORF80438 - 0.13 12.2 0.9 0.29 11.1 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4041) MORN PF02493.20 ORF79704 - 3.1e-19 67.6 28.3 6.7e-07 28.8 1.9 5.5 6 0 0 6 6 6 5 MORN repeat Totivirus_coat PF05518.11 ORF78986 - 7 4.6 9.3 7.4 4.5 9.3 1.0 1 0 0 1 1 1 0 Totivirus coat protein zf-RanBP PF00641.18 ORF78390 - 0.00044 19.5 1.6 0.00044 19.5 1.6 2.3 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others zf-Sec23_Sec24 PF04810.15 ORF78390 - 0.0086 16.1 8.6 0.53 10.4 0.3 3.2 2 1 1 3 3 3 2 Sec23/Sec24 zinc finger Zn_ribbon_SprT PF17283.2 ORF78390 - 0.0095 15.8 5.0 9 6.3 0.0 3.7 3 1 0 3 3 3 2 SprT-like zinc ribbon domain PHD_2 PF13831.6 ORF78390 - 0.027 14.0 9.6 0.28 10.8 0.6 2.9 3 0 0 3 3 3 0 PHD-finger C1_2 PF03107.16 ORF78390 - 0.03 14.7 5.4 0.16 12.3 1.0 2.4 2 0 0 2 2 2 0 C1 domain zf-C2H2_3rep PF18868.1 ORF78390 - 0.18 12.4 0.6 2.3 8.9 0.1 2.1 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats PHD PF00628.29 ORF78390 - 0.37 10.7 10.3 5.1 7.1 0.6 3.1 2 1 1 3 3 3 0 PHD-finger Vps36-NZF-N PF16988.5 ORF78390 - 0.77 9.2 5.2 4.7 6.7 0.4 2.5 2 1 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain DUF2917 PF11142.8 ORF76226 - 0.034 13.6 0.3 5 6.6 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2917) DUF2486 PF10667.9 ORF75954 - 1.3 9.2 19.9 1.3 9.2 19.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2486) CDC27 PF09507.10 ORF75954 - 6.5 6.0 9.6 9.5 5.5 9.6 1.3 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Cytadhesin_P30 PF07271.11 ORF75840 - 0.017 14.7 0.8 0.019 14.5 0.8 1.1 1 0 0 1 1 1 0 Cytadhesin P30/P32 Pkinase PF00069.25 ORF75044 - 1.6e-05 24.4 0.0 2.4e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain TnpW PF14202.6 ORF75044 - 0.037 13.8 3.6 0.12 12.2 0.6 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW FlbD PF06289.11 ORF75044 - 0.044 13.4 0.2 5.2 6.7 0.1 2.3 2 0 0 2 2 2 0 Flagellar and Swarming motility proteins PD-C2-AF1 PF09310.10 ORF74616 - 0.08 12.3 0.1 0.096 12.1 0.1 1.2 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 PAN_1 PF00024.26 ORF73334 - 0.00015 21.7 2.6 0.00028 20.8 2.6 1.6 1 1 0 1 1 1 1 PAN domain PAN_4 PF14295.6 ORF73334 - 0.0028 17.5 1.7 0.0054 16.6 1.7 1.6 1 1 0 1 1 1 1 PAN domain Antistasin PF02822.14 ORF73334 - 5 7.9 8.2 39 5.0 8.2 2.2 1 1 0 1 1 1 0 Antistasin family L31 PF09784.9 ORF71945 - 0.055 13.9 2.3 0.13 12.7 0.6 1.9 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L31 DUF4978 PF16349.5 ORF71945 - 0.11 12.1 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4978) UQ_con PF00179.26 ORF68492 - 0.047 13.3 0.6 0.062 12.9 0.0 1.6 2 0 0 2 2 2 0 Ubiquitin-conjugating enzyme DUF3886 PF13025.6 ORF68492 - 0.05 13.8 3.5 0.05 13.8 3.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3886) RPAP3_C PF13877.6 ORF68138 - 1.1e-08 35.5 0.2 4.1e-08 33.6 0.1 1.9 2 0 0 2 2 2 1 Potential Monad-binding region of RPAP3 DUF1993 PF09351.10 ORF68138 - 0.078 13.1 0.1 0.1 12.7 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1993) Cnn_1N PF07989.11 ORF68138 - 1.1 9.5 5.4 10 6.4 0.2 2.7 1 1 2 3 3 3 0 Centrosomin N-terminal motif 1 CRT-like PF08627.10 ORF67597 - 0.032 13.2 3.7 0.039 12.9 3.7 1.1 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like DUF4405 PF14358.6 ORF67597 - 0.92 10.1 5.3 1.9 9.1 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) Pkinase PF00069.25 ORF67331 - 0.017 14.5 0.0 0.017 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain PBECR2 PF18810.1 ORF67109 - 0.035 14.4 0.0 0.04 14.2 0.0 1.3 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2 RAG2_PHD PF13341.6 ORF67109 - 0.14 12.2 0.1 1.1 9.3 0.1 2.2 1 1 1 2 2 2 0 RAG2 PHD domain tRNA_U5-meth_tr PF05958.11 ORF66930 - 2.2e-12 46.7 0.0 2.8e-12 46.3 0.0 1.3 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 ORF66930 - 6e-05 22.9 0.0 9.6e-05 22.2 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF66930 - 0.014 16.1 0.0 0.047 14.4 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain FDX-ACB PF03147.14 ORF66930 - 0.13 12.7 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain PI3K_C2 PF00792.24 ORF66898 - 0.058 13.3 0.0 0.081 12.8 0.0 1.2 1 0 0 1 1 1 0 Phosphoinositide 3-kinase C2 PRD PF00874.20 ORF6658 - 0.00044 20.5 0.0 0.00054 20.2 0.0 1.1 1 0 0 1 1 1 1 PRD domain DsbD_2 PF13386.6 ORF6639 - 0.017 15.1 0.7 0.022 14.7 0.7 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region ENTH PF01417.20 ORF65731 - 8.2e-27 93.7 0.6 9.5e-27 93.5 0.6 1.1 1 0 0 1 1 1 1 ENTH domain ANTH PF07651.16 ORF65731 - 0.0072 15.4 0.1 0.012 14.7 0.0 1.4 1 1 0 1 1 1 1 ANTH domain MHC_I_3 PF16497.5 ORF65731 - 0.011 15.2 0.3 0.013 15.0 0.3 1.1 1 0 0 1 1 1 0 MHC-I family domain DUF1002 PF06207.11 ORF65731 - 0.016 14.8 0.6 0.022 14.3 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) DUF4327 PF14217.6 ORF65731 - 0.027 14.6 0.1 0.44 10.7 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4327) WASH_WAHD PF11945.8 ORF65317 - 0.0065 16.0 2.0 0.0065 16.0 2.0 1.1 1 0 0 1 1 1 1 WAHD domain of WASH complex RET_CLD1 PF17756.1 ORF65317 - 0.031 14.6 0.1 0.042 14.1 0.1 1.1 1 0 0 1 1 1 0 RET Cadherin like domain 1 Sm_multidrug_ex PF06695.11 ORF63585 - 5.9e-22 78.6 1.5 5.9e-22 78.6 1.5 1.6 2 0 0 2 2 2 1 Putative small multi-drug export protein Sre PF03125.18 ORF63320 - 0.0015 17.8 1.6 0.0017 17.6 1.6 1.1 1 0 0 1 1 1 1 C. elegans Sre G protein-coupled chemoreceptor Ribosomal_L37e PF01907.19 ORF63060 - 0.021 15.0 0.4 0.053 13.7 0.4 1.7 1 0 0 1 1 1 0 Ribosomal protein L37e DUF4179 PF13786.6 ORF63045 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF63045 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF63045 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF63045 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus Tankyrase_bdg_C PF15327.6 ORF62437 - 0.091 13.2 3.3 0.083 13.3 2.2 1.3 1 1 0 1 1 1 0 Tankyrase binding protein C terminal domain DUF349 PF03993.12 ORF61687 - 0.004 17.4 1.3 0.0071 16.6 1.3 1.5 1 0 0 1 1 1 1 Domain of Unknown Function (DUF349) Efg1 PF10153.9 ORF59999 - 0.071 13.5 1.7 0.083 13.3 1.5 1.5 1 1 0 1 1 1 0 rRNA-processing protein Efg1 zf-RanBP PF00641.18 ORF59236 - 0.00044 19.5 1.6 0.00044 19.5 1.6 2.3 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others zf-Sec23_Sec24 PF04810.15 ORF59236 - 0.0086 16.1 8.6 0.53 10.4 0.3 3.2 2 1 1 3 3 3 2 Sec23/Sec24 zinc finger Zn_ribbon_SprT PF17283.2 ORF59236 - 0.0095 15.8 5.0 9 6.3 0.0 3.7 3 1 0 3 3 3 2 SprT-like zinc ribbon domain PHD_2 PF13831.6 ORF59236 - 0.027 14.0 9.6 0.28 10.8 0.6 2.9 3 0 0 3 3 3 0 PHD-finger C1_2 PF03107.16 ORF59236 - 0.03 14.7 5.4 0.16 12.3 1.0 2.4 2 0 0 2 2 2 0 C1 domain zf-C2H2_3rep PF18868.1 ORF59236 - 0.18 12.4 0.6 2.3 8.9 0.1 2.1 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats PHD PF00628.29 ORF59236 - 0.37 10.7 10.3 5.1 7.1 0.6 3.1 2 1 1 3 3 3 0 PHD-finger Vps36-NZF-N PF16988.5 ORF59236 - 0.77 9.2 5.2 4.7 6.7 0.4 2.5 2 1 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain EF-hand_8 PF13833.6 ORF59187 - 1e-07 31.7 1.9 1.4e-07 31.3 0.7 1.9 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF59187 - 2.7e-07 29.7 3.5 3.7e-05 23.0 0.3 3.7 4 0 0 4 4 4 1 EF hand EF-hand_6 PF13405.6 ORF59187 - 1.9e-06 27.4 5.0 2.3e-05 24.0 0.6 3.5 4 0 0 4 4 4 1 EF-hand domain EF-hand_7 PF13499.6 ORF59187 - 1.3e-05 25.5 0.8 9.1e-05 22.8 0.7 2.2 2 0 0 2 2 2 1 EF-hand domain pair Herpes_UL36 PF03586.13 ORF59187 - 0.0041 16.5 0.1 0.0043 16.4 0.1 1.1 1 0 0 1 1 1 1 Herpesvirus UL36 tegument protein EF-hand_5 PF13202.6 ORF59187 - 0.023 14.2 1.5 0.27 10.8 0.8 2.8 2 0 0 2 2 2 0 EF hand Ribosomal_S26e PF01283.19 ORF57183 - 1.6e-42 144.3 10.5 1.9e-42 144.1 10.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S26e KN17_SH3 PF18131.1 ORF56634 - 0.075 13.2 0.2 0.15 12.2 0.2 1.4 1 0 0 1 1 1 0 KN17 SH3-like C-terminal domain LETM1 PF07766.13 ORF56634 - 0.12 11.7 0.4 0.15 11.4 0.4 1.1 1 0 0 1 1 1 0 LETM1-like protein PAP2 PF01569.21 ORF56071 - 0.00069 19.4 3.0 0.0011 18.8 0.8 1.9 2 0 0 2 2 2 1 PAP2 superfamily DUF4179 PF13786.6 ORF55434 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF55434 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF55434 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF55434 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus NYN PF01936.18 ORF53403 - 0.0001 22.8 0.0 0.00013 22.5 0.0 1.1 1 0 0 1 1 1 1 NYN domain YbjQ_1 PF01906.17 ORF51039 - 7.9e-34 116.4 2.1 8.8e-34 116.3 2.1 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding DUF4156 PF13698.6 ORF51039 - 0.032 14.6 0.2 0.054 13.8 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4156) SeleniumBinding PF11524.8 ORF51039 - 0.032 14.6 0.2 0.54 10.7 0.0 2.0 2 0 0 2 2 2 0 Selenium binding protein Trimer_CC PF08954.11 ORF51039 - 0.13 11.8 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 Trimerisation motif COMPASS-Shg1 PF05205.12 ORF50298 - 0.2 12.4 11.7 0.27 12.0 11.7 1.2 1 0 0 1 1 1 0 COMPASS (Complex proteins associated with Set1p) component shg1 PAN_1 PF00024.26 ORF5005 - 0.00023 21.1 1.2 0.00032 20.6 1.2 1.4 1 1 0 1 1 1 1 PAN domain PAN_4 PF14295.6 ORF5005 - 0.18 11.7 4.9 0.18 11.8 2.4 2.3 2 1 0 2 2 2 0 PAN domain UPF0016 PF01169.19 ORF49949 - 1e-05 25.8 0.4 1.7e-05 25.1 0.4 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0016 DUF4179 PF13786.6 ORF48248 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF48248 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF48248 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF48248 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus PRCH PF03967.13 ORF47929 - 4.9 7.4 5.1 65 3.8 5.1 2.2 1 1 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region Cuticle_1 PF08140.11 ORF47929 - 7.1 6.8 5.9 8.7 6.5 0.4 3.1 1 1 2 3 3 3 0 Crustacean cuticle protein repeat Flavodoxin_1 PF00258.25 ORF47331 - 1.5e-14 54.4 0.1 1.7e-14 54.2 0.1 1.0 1 0 0 1 1 1 1 Flavodoxin Chrome_Resist PF09828.9 ORF47331 - 0.038 14.4 0.1 0.043 14.3 0.1 1.2 1 0 0 1 1 1 0 Chromate resistance exported protein PROCN PF08083.11 ORF47331 - 0.073 11.8 0.0 0.11 11.2 0.0 1.2 1 0 0 1 1 1 0 PROCN (NUC071) domain Cadherin_C_2 PF16492.5 ORF47217 - 0.035 14.9 0.0 0.043 14.6 0.0 1.2 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal TMEM132D_C PF15706.5 ORF47217 - 0.055 13.3 0.0 0.066 13.0 0.0 1.3 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term NUDIX PF00293.28 ORF4702 - 4.8e-18 65.5 0.2 6e-18 65.2 0.2 1.0 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 ORF4702 - 0.00015 21.3 0.0 0.00019 20.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4916) NUDIX_4 PF14815.6 ORF4702 - 0.001 19.0 0.0 0.003 17.5 0.0 1.6 1 1 0 1 1 1 1 NUDIX domain MORN PF02493.20 ORF46994 - 5.4e-05 22.8 13.8 7.2e-05 22.4 1.4 4.7 6 0 0 6 6 6 2 MORN repeat PCAF_N PF06466.11 ORF46910 - 0.049 13.2 0.2 0.051 13.1 0.2 1.1 1 0 0 1 1 1 0 PCAF (P300/CBP-associated factor) N-terminal domain PAN_1 PF00024.26 ORF46299 - 0.00023 21.1 1.2 0.00032 20.6 1.2 1.4 1 1 0 1 1 1 1 PAN domain PAN_4 PF14295.6 ORF46299 - 0.18 11.7 4.9 0.18 11.8 2.4 2.3 2 1 0 2 2 2 0 PAN domain DUF1932 PF09130.11 ORF45924 - 0.1 12.6 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) Pox_A_type_inc PF04508.12 ORF4409 - 0.0024 17.6 0.4 0.0051 16.6 0.4 1.6 1 0 0 1 1 1 1 Viral A-type inclusion protein repeat zf-B_box PF00643.24 ORF4409 - 0.019 15.1 10.4 0.026 14.6 10.4 1.2 1 0 0 1 1 1 0 B-box zinc finger PHD PF00628.29 ORF4409 - 0.028 14.3 6.7 0.049 13.5 6.7 1.5 1 1 0 1 1 1 0 PHD-finger PHD_2 PF13831.6 ORF4409 - 0.03 13.9 2.4 0.068 12.7 2.4 1.6 1 0 0 1 1 1 0 PHD-finger V-SNARE PF05008.15 ORF4409 - 0.055 13.8 3.1 0.067 13.6 0.9 2.2 2 1 0 2 2 2 0 Vesicle transport v-SNARE protein N-terminus TDA11 PF17084.5 ORF4409 - 0.064 12.2 0.1 0.07 12.1 0.1 1.1 1 0 0 1 1 1 0 Topoisomerase I damage affected protein 11 zf-Tim10_DDP PF02953.15 ORF43993 - 0.013 15.1 0.5 0.027 14.1 0.5 1.4 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Pkinase PF00069.25 ORF4381 - 1.6e-05 24.4 0.0 2.4e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain TnpW PF14202.6 ORF4381 - 0.038 13.8 3.6 0.12 12.2 0.6 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW FlbD PF06289.11 ORF4381 - 0.044 13.4 0.2 5.2 6.7 0.1 2.3 2 0 0 2 2 2 0 Flagellar and Swarming motility proteins AAA_19 PF13245.6 ORF4246 - 0.0084 16.5 0.0 0.011 16.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF4246 - 0.024 14.4 0.0 0.029 14.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain TFIIS_C PF01096.18 ORF41981 - 0.004 17.0 3.9 0.014 15.2 3.9 1.8 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) zf-CSL PF05207.13 ORF41981 - 0.022 14.5 0.6 0.037 13.8 0.4 1.5 2 0 0 2 2 2 0 CSL zinc finger Zn-ribbon_8 PF09723.10 ORF41981 - 5.7 7.1 8.6 28 4.9 8.6 2.0 1 1 0 1 1 1 0 Zinc ribbon domain DUF5371 PF17341.2 ORF41912 - 0.0074 16.5 1.6 0.013 15.7 1.6 1.6 1 1 0 1 1 1 1 Family of unknown function (DUF5371) Imm30 PF15565.6 ORF41912 - 0.045 13.8 0.6 0.083 13.0 0.6 1.5 1 1 0 1 1 1 0 Immunity protein 30 EF-hand_14 PF17959.1 ORF41912 - 0.21 11.9 2.1 0.34 11.3 2.1 1.4 1 1 0 1 1 1 0 EF-hand domain FTCD_C PF04961.12 ORF41912 - 0.22 11.3 3.5 0.12 12.1 1.6 1.7 2 1 0 2 2 2 0 Formiminotransferase-cyclodeaminase Thioredoxin PF00085.20 ORF41826 - 0.0031 17.5 0.0 0.1 12.6 0.0 2.0 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF41826 - 0.039 14.3 0.6 0.092 13.1 0.2 1.7 2 0 0 2 2 2 0 Thioredoxin-like Viral_alk_exo PF01771.17 ORF41826 - 0.044 12.6 0.3 0.049 12.5 0.3 1.1 1 0 0 1 1 1 0 Viral alkaline exonuclease UPF0016 PF01169.19 ORF4134 - 1e-05 25.8 0.4 1.7e-05 25.1 0.4 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0016 Osw5 PF17062.5 ORF41196 - 6.8 6.9 18.0 2.3 8.4 8.9 2.6 2 0 0 2 2 2 0 Outer spore wall 5 Ku_PK_bind PF08785.11 ORF40003 - 6.6e-28 97.3 0.1 8e-28 97.0 0.1 1.1 1 0 0 1 1 1 1 Ku C terminal domain like Wza_C PF18412.1 ORF39260 - 4.1e-17 61.6 0.4 7.7e-17 60.7 0.4 1.5 1 0 0 1 1 1 1 Outer-membrane lipoprotein Wza C-terminal domain RPAP3_C PF13877.6 ORF3857 - 1.1e-08 35.5 0.2 4.1e-08 33.6 0.1 1.9 2 0 0 2 2 2 1 Potential Monad-binding region of RPAP3 DUF1993 PF09351.10 ORF3857 - 0.078 13.1 0.1 0.1 12.7 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1993) Cnn_1N PF07989.11 ORF3857 - 1.1 9.5 5.4 10 6.4 0.2 2.7 1 1 2 3 3 3 0 Centrosomin N-terminal motif 1 PAN_1 PF00024.26 ORF38559 - 0.00023 21.1 1.2 0.00032 20.6 1.2 1.4 1 1 0 1 1 1 1 PAN domain PAN_4 PF14295.6 ORF38559 - 0.18 11.7 4.9 0.18 11.8 2.4 2.3 2 1 0 2 2 2 0 PAN domain ATP-synt_8 PF00895.20 ORF38548 - 0.072 13.6 0.2 0.14 12.6 0.2 1.5 1 0 0 1 1 1 0 ATP synthase protein 8 MatE PF01554.18 ORF38548 - 0.13 11.9 2.3 0.084 12.5 0.8 1.4 2 0 0 2 2 2 0 MatE PsaX PF08078.12 ORF38548 - 7.3 6.6 7.3 1.5 8.8 0.1 2.7 3 0 0 3 3 3 0 PsaX family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks194.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks194.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks194.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks194.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Glyco_hydro_30 PF02055.16 ORF37664 - 7.1e-22 77.8 0.1 8.3e-22 77.6 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 TIM-barrel domain DUF1932 PF09130.11 ORF36604 - 0.1 12.6 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) Ig_J_chain PF15097.6 ORF35117 - 0.042 13.7 0.1 0.048 13.5 0.1 1.2 1 0 0 1 1 1 0 Immunoglobulin J chain DUF4921 PF16268.5 ORF35117 - 0.073 11.9 1.0 0.086 11.6 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4921) DUF4179 PF13786.6 ORF34843 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF34843 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF34843 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF34843 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus Band_7 PF01145.25 ORF34784 - 0.00071 19.6 0.0 0.0008 19.5 0.0 1.0 1 0 0 1 1 1 1 SPFH domain / Band 7 family DUF2487 PF10673.9 ORF32758 - 0.22 11.6 0.0 0.76 9.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2487) MFS_1 PF07690.16 ORF3254 - 2.6e-05 23.3 5.5 2.8e-05 23.2 5.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1616 PF07760.11 ORF3254 - 1.8 7.9 4.1 2.3 7.5 4.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) Pacifastin_I PF05375.13 ORF31879 - 0.038 13.7 1.3 0.06 13.1 1.3 1.3 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) Pkinase PF00069.25 ORF31328 - 3.4e-21 75.8 0.2 4.1e-21 75.5 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF31328 - 1.1e-10 41.2 0.1 1.4e-10 40.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FumaraseC_C PF10415.9 ORF29946 - 0.019 15.4 0.0 0.033 14.6 0.0 1.5 1 0 0 1 1 1 0 Fumarase C C-terminus Vfa1 PF08432.10 ORF29946 - 0.13 12.5 19.3 0.15 12.4 19.3 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Gti1_Pac2 PF09729.9 ORF29946 - 0.14 12.3 9.6 0.16 12.1 9.6 1.1 1 0 0 1 1 1 0 Gti1/Pac2 family MMM1 PF10296.9 ORF29946 - 0.21 10.6 6.0 0.24 10.4 6.0 1.1 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 DUF3807 PF12720.7 ORF29946 - 1.2 9.4 16.1 1.4 9.1 16.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) PPL5 PF18168.1 ORF29946 - 1.4 8.1 8.6 1.8 7.8 8.6 1.3 1 0 0 1 1 1 0 Prim-pol family 5 DUF4820 PF16091.5 ORF29946 - 1.6 8.1 9.3 2 7.7 9.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Presenilin PF01080.17 ORF29946 - 8 5.1 10.5 7.9 5.1 10.5 1.0 1 0 0 1 1 1 0 Presenilin Connexin PF00029.19 ORF29946 - 8.4 6.1 6.9 10 5.8 6.9 1.2 1 0 0 1 1 1 0 Connexin Glyco_transf_18 PF15024.6 ORF29732 - 0.019 13.6 1.5 0.021 13.4 1.5 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 bZIP_2 PF07716.15 ORF29732 - 0.032 14.3 2.3 0.065 13.3 0.1 2.5 2 1 0 2 2 2 0 Basic region leucine zipper TPR_MLP1_2 PF07926.12 ORF29732 - 0.033 14.2 0.5 0.033 14.2 0.5 2.1 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF1664 PF07889.12 ORF29732 - 0.045 13.8 5.2 0.06 13.4 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) TFR_dimer PF04253.15 ORF29732 - 0.051 13.7 0.5 0.092 12.9 0.5 1.4 1 0 0 1 1 1 0 Transferrin receptor-like dimerisation domain PreAtp-grasp PF18604.1 ORF29036 - 0.13 11.9 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Pre ATP-grasp domain DUF5576 PF17739.1 ORF2879 - 0.008 16.3 0.6 0.0092 16.1 0.6 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5576) CCT PF06203.14 ORF2854 - 9.2e-13 48.0 9.8 1.5e-12 47.3 9.8 1.4 1 0 0 1 1 1 1 CCT motif Ten1_2 PF15490.6 ORF28137 - 1.4e-10 40.9 0.0 1.6e-10 40.7 0.0 1.1 1 0 0 1 1 1 1 Telomere-capping, CST complex subunit Rep_fac-A_3 PF08661.11 ORF28137 - 3.5e-05 24.1 0.0 3.9e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Replication factor A protein 3 RAP PF08373.10 ORF27759 - 2.1e-09 37.4 0.0 2.7e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 RAP domain DUF498 PF04430.14 ORF26931 - 0.13 12.3 0.0 0.22 11.6 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) PAN_1 PF00024.26 ORF26843 - 0.00023 21.1 1.2 0.00032 20.6 1.2 1.4 1 1 0 1 1 1 1 PAN domain PAN_4 PF14295.6 ORF26843 - 0.18 11.7 4.9 0.18 11.8 2.4 2.3 2 1 0 2 2 2 0 PAN domain MNE1 PF13762.6 ORF26201 - 0.16 11.9 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component DUF778 PF05608.12 ORF25490 - 3.4e-06 27.6 0.0 1.2e-05 25.8 0.0 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF778) DUF4179 PF13786.6 ORF24938 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF24938 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF24938 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF24938 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus zf-C2H2_aberr PF17017.5 ORF22947 - 0.01 16.0 1.3 0.013 15.6 1.3 1.1 1 0 0 1 1 1 0 Aberrant zinc-finger FAM219A PF15260.6 ORF22947 - 0.018 15.4 0.6 0.022 15.1 0.6 1.1 1 0 0 1 1 1 0 Protein family FAM219A Cys_rich_CPXG PF14255.6 ORF22745 - 0.11 12.4 0.5 0.16 11.9 0.5 1.2 1 0 0 1 1 1 0 Cysteine-rich CPXCG Cyt_bd_oxida_II PF02322.15 ORF22048 - 0.0076 15.6 1.5 0.0083 15.5 1.5 1.1 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II Arf PF00025.21 ORF21556 - 6.7e-41 139.6 0.0 7.2e-41 139.5 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family G-alpha PF00503.20 ORF21556 - 9.5e-10 38.1 0.5 2e-09 37.1 0.6 1.4 1 1 0 1 1 1 1 G-protein alpha subunit Roc PF08477.13 ORF21556 - 3.3e-08 33.8 0.0 4.2e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Gtr1_RagA PF04670.12 ORF21556 - 3.9e-08 32.9 0.1 4.6e-08 32.7 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF21556 - 1.3e-06 28.0 0.0 1.5e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF21556 - 1.5e-05 24.6 0.0 1.8e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Ras family MMR_HSR1 PF01926.23 ORF21556 - 0.0051 16.9 0.0 0.0064 16.6 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF21556 - 0.0061 16.1 0.0 0.0072 15.9 0.0 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Vmethyltransf PF01660.17 ORF21556 - 0.14 11.0 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Viral methyltransferase Gar1 PF04410.14 ORF21452 - 1.4e-08 34.7 0.0 1.6e-08 34.5 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region zf-RanBP PF00641.18 ORF2142 - 0.00044 19.5 1.6 0.00044 19.5 1.6 2.3 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others zf-Sec23_Sec24 PF04810.15 ORF2142 - 0.0086 16.1 8.6 0.53 10.4 0.3 3.2 2 1 1 3 3 3 2 Sec23/Sec24 zinc finger Zn_ribbon_SprT PF17283.2 ORF2142 - 0.0095 15.8 5.0 9 6.3 0.0 3.7 3 1 0 3 3 3 2 SprT-like zinc ribbon domain PHD_2 PF13831.6 ORF2142 - 0.027 14.0 9.6 0.28 10.8 0.6 2.9 3 0 0 3 3 3 0 PHD-finger C1_2 PF03107.16 ORF2142 - 0.03 14.7 5.4 0.16 12.3 1.0 2.4 2 0 0 2 2 2 0 C1 domain zf-C2H2_3rep PF18868.1 ORF2142 - 0.18 12.4 0.6 2.3 8.9 0.1 2.1 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats PHD PF00628.29 ORF2142 - 0.37 10.7 10.3 5.1 7.1 0.6 3.1 2 1 1 3 3 3 0 PHD-finger Vps36-NZF-N PF16988.5 ORF2142 - 0.77 9.2 5.2 4.7 6.7 0.4 2.5 2 1 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain DUF4284 PF14112.6 ORF21406 - 0.023 15.6 1.7 0.029 15.3 1.7 1.3 1 0 0 1 1 1 0 Immunity protein 22 NdhM PF10664.9 ORF21406 - 0.086 13.1 1.5 1.4 9.2 0.1 2.2 1 1 1 2 2 2 0 Cyanobacterial and plastid NDH-1 subunit M RuvB_N PF05496.12 ORF21406 - 0.1 12.3 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Aldo_ket_red PF00248.21 ORF19762 - 3.9e-12 46.0 0.0 4.2e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family EF-hand_5 PF13202.6 ORF1789 - 3.5e-23 80.0 0.4 2.1e-07 30.1 0.1 3.3 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF1789 - 1.3e-15 55.9 0.2 0.00026 20.7 0.1 3.2 3 0 0 3 3 3 3 EF-hand domain EF-hand_1 PF00036.32 ORF1789 - 2.3e-15 54.9 0.0 0.00048 19.5 0.0 3.3 2 1 1 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF1789 - 1.6e-14 54.1 0.4 0.00012 22.4 0.0 3.1 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF1789 - 5.9e-06 26.0 0.6 0.33 10.8 0.1 3.3 3 0 0 3 3 3 2 EF-hand domain pair Dockerin_1 PF00404.18 ORF1789 - 0.00022 21.3 0.7 1.8 8.8 0.1 3.2 2 1 1 3 3 3 2 Dockerin type I domain SPARC_Ca_bdg PF10591.9 ORF1789 - 0.003 17.8 0.6 3 8.2 0.0 2.8 2 1 1 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region UEV PF05743.13 ORF1789 - 0.0075 16.1 0.5 11 5.9 0.0 3.0 1 1 1 3 3 3 1 UEV domain NUC205 PF08168.11 ORF1789 - 0.064 12.8 0.0 0.099 12.2 0.0 1.3 1 0 0 1 1 1 0 NUC205 domain DUF898 PF05987.13 ORF17828 - 0.071 12.1 0.8 0.58 9.1 0.8 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF898) MFS_1 PF07690.16 ORF17828 - 0.099 11.5 4.1 0.12 11.2 4.1 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily Big_11 PF18200.1 ORF16701 - 0.1 12.5 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial Ig-like domain Pkinase PF00069.25 ORF16196 - 0.0096 15.3 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Spo7_2_N PF15407.6 ORF16171 - 0.11 12.2 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Sporulation protein family 7 DUF2325 PF10087.9 ORF14899 - 0.072 13.2 0.3 0.072 13.2 0.3 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) Beta_protein PF14350.6 ORF14899 - 0.1 12.0 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Beta protein ANAPC4_WD40 PF12894.7 ORF13982 - 0.0051 17.1 0.0 0.021 15.1 0.0 1.9 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF13982 - 0.017 16.0 0.0 0.065 14.1 0.0 1.9 2 0 0 2 2 2 0 WD domain, G-beta repeat WD40_like PF17005.5 ORF13982 - 0.049 12.9 0.1 0.52 9.6 0.1 1.9 1 1 0 2 2 2 0 WD40-like domain Aldo_ket_red PF00248.21 ORF13954 - 3.9e-12 46.0 0.0 4.2e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family TBSV_P22 PF03558.13 ORF13336 - 0.0063 16.0 0.0 0.0078 15.7 0.0 1.1 1 0 0 1 1 1 1 TBSV core protein P21/P22 zf-H2C2_2 PF13465.6 ORF122 - 1.3e-08 34.9 6.5 9.6e-08 32.1 1.5 3.6 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF122 - 3.5e-07 30.3 19.0 0.00015 22.0 1.8 4.2 3 1 1 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF122 - 1.3e-05 25.7 18.3 0.00021 21.9 1.5 3.8 3 1 1 4 4 4 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF122 - 0.029 15.1 1.8 0.029 15.1 1.8 2.2 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_jaz PF12171.8 ORF122 - 1.1 9.6 10.5 7.6 6.9 0.6 2.7 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding Peptidase_U57 PF05582.12 ORF11825 - 0.022 14.0 0.7 0.024 13.9 0.7 1.1 1 0 0 1 1 1 0 YabG peptidase U57 PAN_1 PF00024.26 ORF11229 - 0.00023 21.1 1.2 0.00032 20.6 1.2 1.4 1 1 0 1 1 1 1 PAN domain PAN_4 PF14295.6 ORF11229 - 0.18 11.7 4.9 0.18 11.8 2.4 2.3 2 1 0 2 2 2 0 PAN domain DUF3418 PF11898.8 ORF110471 - 0.021 13.6 0.0 0.023 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) Cyt-b5 PF00173.28 ORF110430 - 1.4e-20 73.2 0.0 1.8e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain EF-hand_6 PF13405.6 ORF109895 - 0.0029 17.4 0.1 0.0049 16.7 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF109895 - 0.024 15.1 0.0 0.034 14.6 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair FolB PF02152.18 ORF109352 - 2.5e-25 89.2 1.0 2.8e-25 89.0 1.0 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase SAVED PF18145.1 ORF109352 - 0.048 13.5 0.3 0.054 13.3 0.3 1.2 1 0 0 1 1 1 0 SMODS-associated and fused to various effectors sensor domain KH_5 PF13184.6 ORF108079 - 0.0064 16.6 1.6 0.0078 16.3 0.5 1.7 2 0 0 2 2 2 1 NusA-like KH domain YscO PF07321.12 ORF108079 - 0.027 14.4 3.0 0.034 14.1 3.0 1.3 1 1 0 1 1 1 0 Type III secretion protein YscO Histidinol_dh PF00815.20 ORF108079 - 0.12 11.4 4.0 0.13 11.2 4.0 1.0 1 0 0 1 1 1 0 Histidinol dehydrogenase DUF4890 PF16231.5 ORF108079 - 0.32 11.5 11.7 0.04 14.4 5.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4890) Exonuc_VII_L PF02601.15 ORF108079 - 0.36 10.4 4.7 0.39 10.2 4.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit ISG65-75 PF11727.8 ORF108079 - 0.81 8.9 8.8 0.22 10.7 4.5 1.7 1 1 0 1 1 1 0 Invariant surface glycoprotein YtxH PF12732.7 ORF108079 - 1.2 9.8 4.4 43 4.7 4.4 2.2 1 1 0 1 1 1 0 YtxH-like protein Glyco_transf_10 PF00852.19 ORF108011 - 0.12 12.1 0.7 0.2 11.4 0.4 1.5 1 1 1 2 2 2 0 Glycosyltransferase family 10 (fucosyltransferase) C-term DUF3418 PF11898.8 ORF10699 - 0.021 13.6 0.0 0.023 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) DUF4686 PF15742.5 ORF106691 - 0.045 12.9 0.3 0.052 12.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4686) Alginate_exp PF13372.6 ORF104257 - 0.071 11.8 0.1 5.8 5.5 0.0 2.1 2 0 0 2 2 2 0 Alginate export zf-RanBP PF00641.18 ORF104133 - 0.00044 19.5 1.6 0.00044 19.5 1.6 2.3 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others zf-Sec23_Sec24 PF04810.15 ORF104133 - 0.0086 16.1 8.6 0.53 10.4 0.3 3.2 2 1 1 3 3 3 2 Sec23/Sec24 zinc finger Zn_ribbon_SprT PF17283.2 ORF104133 - 0.0095 15.8 5.0 9 6.3 0.0 3.7 3 1 0 3 3 3 2 SprT-like zinc ribbon domain PHD_2 PF13831.6 ORF104133 - 0.027 14.0 9.6 0.28 10.8 0.6 2.9 3 0 0 3 3 3 0 PHD-finger C1_2 PF03107.16 ORF104133 - 0.03 14.7 5.4 0.16 12.3 1.0 2.4 2 0 0 2 2 2 0 C1 domain zf-C2H2_3rep PF18868.1 ORF104133 - 0.18 12.4 0.6 2.3 8.9 0.1 2.1 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats PHD PF00628.29 ORF104133 - 0.37 10.7 10.3 5.1 7.1 0.6 3.1 2 1 1 3 3 3 0 PHD-finger Vps36-NZF-N PF16988.5 ORF104133 - 0.77 9.2 5.2 4.7 6.7 0.4 2.5 2 1 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain ALG11_N PF15924.5 ORF103633 - 2e-17 64.0 4.5 8.7e-12 45.5 1.0 2.1 1 1 1 2 2 2 2 ALG11 mannosyltransferase N-terminus PAZ_siRNAbind PF12212.8 ORF103633 - 0.012 15.5 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 PAZ domain Glyco_transf_4 PF13439.6 ORF103633 - 0.018 15.0 0.2 0.024 14.7 0.2 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Frag1 PF10277.9 ORF10346 - 0.012 15.1 2.3 0.016 14.8 2.3 1.1 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family Ycf70 PF17382.2 ORF10346 - 2 8.9 7.9 1.8 9.0 0.8 2.6 1 1 2 3 3 3 0 Uncharacterized Ycf70-like WW PF00397.26 ORF103258 - 0.008 16.2 0.8 0.016 15.3 0.8 1.5 1 0 0 1 1 1 1 WW domain Succ_CoA_lig PF13607.6 ORF102372 - 0.17 11.7 0.0 0.29 10.9 0.0 1.4 2 0 0 2 2 2 0 Succinyl-CoA ligase like flavodoxin domain RFC1 PF08519.12 ORF101860 - 0.0084 16.3 0.1 0.0084 16.3 0.1 1.6 2 0 0 2 2 2 1 Replication factor RFC1 C terminal domain PBP1_TM PF14812.6 ORF101860 - 2.5 8.5 11.3 5.2 7.5 11.3 1.6 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal BCA_ABC_TP_C PF12399.8 ORF101831 - 0.15 12.0 1.5 6.6 6.8 0.2 2.4 2 0 0 2 2 2 0 Branched-chain amino acid ATP-binding cassette transporter HEPN_RnaseLS PF18869.1 ORF100878 - 0.25 11.5 0.0 0.34 11.0 0.0 1.1 1 0 0 1 1 1 0 RnaseLS-like HEPN PD-C2-AF1 PF09310.10 ORF100740 - 0.08 12.3 0.1 0.096 12.1 0.1 1.2 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 LysE PF01810.18 ORF100017 - 0.05 13.0 0.1 0.32 10.4 0.0 1.9 2 0 0 2 2 2 0 LysE type translocator TMEM72 PF16054.5 ORF100011 - 0.14 11.9 0.8 0.23 11.2 0.8 1.3 1 0 0 1 1 1 0 Transmembrane protein family 72 Peptidase_C8 PF03569.13 NODE_51250_length_355_cov_1.312500_g43340_i0reverse_frame_1 - 0.088 12.3 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Peptidase family C8 Macro PF01661.21 NODE_51245_length_355_cov_1.618750_g43335_i0forward_frame_1 - 0.019 15.0 0.1 0.038 14.0 0.1 1.5 1 0 0 1 1 1 0 Macro domain Mif2_N PF15624.6 NODE_51236_length_355_cov_2.021875_g43326_i0reverse_frame_1 - 0.0032 18.2 0.7 0.0041 17.8 0.7 1.1 1 0 0 1 1 1 1 Kinetochore CENP-C fungal homologue, Mif2, N-terminal zf-C6H2 PF15801.5 NODE_51236_length_355_cov_2.021875_g43326_i0forward_frame_1 - 0.088 13.1 1.7 0.13 12.6 1.7 1.2 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding Endonuc-dimeris PF09124.10 NODE_51236_length_355_cov_2.021875_g43326_i0forward_frame_1 - 0.092 12.9 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 T4 recombination endonuclease VII, dimerisation MFS_1 PF07690.16 NODE_51229_length_355_cov_2.318750_g43319_i0forward_frame_1 - 5.3e-06 25.6 1.1 5.9e-06 25.4 1.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4528 PF15031.6 NODE_51229_length_355_cov_2.318750_g43319_i0forward_frame_1 - 0.067 13.2 0.0 0.093 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) LacI PF00356.21 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.0021 17.8 0.4 0.004 16.9 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family GerE PF00196.19 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.022 14.3 0.1 0.062 12.8 0.1 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_Tnp_ISL3 PF13542.6 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.037 13.4 0.1 0.26 10.7 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Ubiquitin_5 PF18037.1 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.04 14.3 0.2 0.056 13.8 0.2 1.3 1 0 0 1 1 1 0 Ubiquitin-like domain eIF-5_eIF-2B PF01873.17 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.097 12.6 0.3 0.12 12.3 0.3 1.2 1 0 0 1 1 1 0 Domain found in IF2B/IF5 YfhO PF09586.10 NODE_51226_length_355_cov_2.490625_g43316_i0forward_frame_1 - 0.16 10.2 5.0 0.18 10.0 5.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF3179 PF11376.8 NODE_51222_length_355_cov_2.865625_g43312_i0reverse_frame_1 - 0.032 13.6 0.0 0.042 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3179) MitoNEET_N PF10660.9 NODE_51220_length_355_cov_3.021875_g43310_i0forward_frame_1 - 0.033 14.2 0.5 0.077 13.0 0.0 1.9 3 0 0 3 3 3 0 Iron-containing outer mitochondrial membrane protein N-terminus Phage_Arf PF17585.2 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_1 - 0.24 11.4 0.1 26 4.9 0.0 2.1 2 0 0 2 2 2 0 Accessory recombination function protein 2OG-FeII_Oxy_3 PF13640.6 NODE_51179_length_355_cov_93.934375_g43269_i0reverse_frame_1 - 1.8e-08 35.2 0.0 2.3e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily NdhL PF10716.9 NODE_51165_length_355_cov_709.593750_g43255_i0reverse_frame_1 - 0.06 13.3 0.5 0.46 10.5 0.0 2.2 2 0 0 2 2 2 0 NADH dehydrogenase transmembrane subunit Thiolase_C PF02803.18 NODE_51160_length_355_cov_3512.378125_g43251_i0forward_frame_1 - 0.15 11.7 1.0 0.22 11.2 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain DUF4522 PF15022.6 NODE_51156_length_356_cov_1.364486_g43247_i0reverse_frame_1 - 0.096 12.9 0.2 0.33 11.2 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4522) AreA_N PF07573.11 NODE_51154_length_356_cov_1.467290_g43245_i0reverse_frame_1 - 0.067 13.8 0.5 0.12 13.0 0.5 1.4 1 0 0 1 1 1 0 Nitrogen regulatory protein AreA N terminus NUDIX PF00293.28 NODE_51146_length_356_cov_1.990654_g43237_i0reverse_frame_1 - 6.3e-10 39.2 0.0 7.2e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain WES_acyltransf PF03007.16 NODE_51135_length_356_cov_2.392523_g43226_i0forward_frame_1 - 6.9e-05 22.7 0.0 8.3e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain LisH_TPL PF17814.1 NODE_51134_length_356_cov_2.429907_g43225_i0reverse_frame_1 - 0.23 11.2 3.5 8.5 6.1 0.1 2.6 3 0 0 3 3 3 0 LisH-like dimerisation domain UME PF08064.13 NODE_51129_length_356_cov_2.585670_g43220_i0reverse_frame_1 - 0.12 12.3 0.2 0.19 11.7 0.2 1.3 1 1 0 1 1 1 0 UME (NUC010) domain SMC_ScpA PF02616.14 NODE_51129_length_356_cov_2.585670_g43220_i0forward_frame_1 - 0.034 14.0 0.0 0.042 13.8 0.0 1.1 1 0 0 1 1 1 0 Segregation and condensation protein ScpA STAG PF08514.11 NODE_51128_length_356_cov_2.610592_g43219_i0forward_frame_1 - 0.24 11.3 1.4 0.31 11.0 1.4 1.2 1 0 0 1 1 1 0 STAG domain DUF5336 PF17270.2 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_1 - 0.0069 16.0 0.5 0.009 15.7 0.5 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5336) DUF2207 PF09972.9 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_1 - 0.012 14.4 0.7 0.014 14.2 0.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4781 PF16013.5 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_1 - 0.018 13.9 0.2 0.019 13.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) Ferlin_C PF16165.5 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_1 - 2.5 8.1 5.1 1.1 9.2 3.0 1.6 1 1 0 1 1 1 0 Ferlin C-terminus RCC1 PF00415.18 NODE_51120_length_356_cov_2.968847_g43211_i0reverse_frame_1 - 1.2e-13 51.4 2.3 4.6e-11 43.2 0.0 3.3 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_51120_length_356_cov_2.968847_g43211_i0reverse_frame_1 - 8.7e-10 38.2 8.7 6.5e-05 22.6 0.3 2.8 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat Glyco_transf_5 PF08323.11 NODE_51117_length_356_cov_3.174455_g43208_i0reverse_frame_1 - 0.074 12.7 0.0 0.088 12.5 0.0 1.2 1 0 0 1 1 1 0 Starch synthase catalytic domain Mre11_DNA_bind PF04152.14 NODE_51117_length_356_cov_3.174455_g43208_i0reverse_frame_1 - 0.15 12.4 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Mre11 DNA-binding presumed domain Na_H_Exchanger PF00999.21 NODE_51117_length_356_cov_3.174455_g43208_i0forward_frame_1 - 1.8e-10 40.2 3.2 2.2e-10 39.9 3.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family MFS_1_like PF12832.7 NODE_51108_length_356_cov_50.498442_g43199_i0reverse_frame_1 - 0.013 14.4 0.1 0.014 14.3 0.1 1.0 1 0 0 1 1 1 0 MFS_1 like family Ins145_P3_rec PF08709.11 NODE_51102_length_356_cov_61.697819_g43193_i0forward_frame_1 - 2.1e-08 33.6 0.0 2.6e-08 33.3 0.0 1.0 1 0 0 1 1 1 1 Inositol 1,4,5-trisphosphate/ryanodine receptor DUF3364 PF11844.8 NODE_51102_length_356_cov_61.697819_g43193_i0forward_frame_1 - 0.013 15.7 0.0 0.025 14.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) 7TMR-HDED PF07697.11 NODE_51102_length_356_cov_61.697819_g43193_i0forward_frame_1 - 0.14 12.2 0.8 0.19 11.8 0.8 1.1 1 0 0 1 1 1 0 7TM-HD extracellular TLV_coat PF00429.19 NODE_51101_length_356_cov_70.370717_g43192_i0reverse_frame_1 - 0.065 11.9 0.5 0.076 11.7 0.5 1.0 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) PPV_E2_C PF00511.17 NODE_51098_length_356_cov_73.962617_g43189_i0reverse_frame_1 - 3.8 7.8 9.0 1.2 9.3 0.2 2.4 2 1 0 2 2 2 0 E2 (early) protein, C terminal Suppressor_APC PF11414.8 NODE_51083_length_356_cov_100.510903_g43174_i0reverse_frame_1 - 0.012 15.6 2.4 0.026 14.6 1.8 1.7 1 1 1 2 2 2 0 Adenomatous polyposis coli tumour suppressor protein YafO_toxin PF13957.6 NODE_51083_length_356_cov_100.510903_g43174_i0reverse_frame_1 - 0.39 10.8 3.6 0.34 11.0 1.1 1.9 1 1 1 2 2 2 0 Toxin YafO, type II toxin-antitoxin system DUF2451 PF10474.9 NODE_51074_length_356_cov_119.099688_g43165_i0reverse_frame_1 - 8.3e-06 25.7 0.1 1.3e-05 25.1 0.1 1.5 1 1 0 1 1 1 1 Protein of unknown function C-terminus (DUF2451) Toxin_GhoT_OrtT PF10753.9 NODE_51053_length_357_cov_1.602484_g43145_i0reverse_frame_1 - 0.026 14.7 2.0 0.051 13.8 2.0 1.4 1 0 0 1 1 1 0 Toxin GhoT_OrtT TcA_RBD PF18518.1 NODE_51053_length_357_cov_1.602484_g43145_i0forward_frame_1 - 0.032 14.5 0.4 0.041 14.2 0.4 1.2 1 0 0 1 1 1 0 TcA receptor binding domain Frag1 PF10277.9 NODE_51046_length_357_cov_2.086957_g43138_i0reverse_frame_1 - 0.02 14.4 0.3 0.024 14.2 0.3 1.1 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family MLVIN_C PF18697.1 NODE_51041_length_357_cov_2.583851_g43133_i0reverse_frame_1 - 0.028 14.5 0.2 0.05 13.7 0.2 1.5 1 0 0 1 1 1 0 Murine leukemia virus (MLV) integrase (IN) C-terminal domain M64_N PF16217.5 NODE_51040_length_357_cov_2.956522_g43132_i0reverse_frame_1 - 0.07 12.7 0.0 0.59 9.7 0.0 1.9 2 0 0 2 2 2 0 Peptidase M64 N-terminus Alba PF01918.21 NODE_51037_length_357_cov_3.245342_g43129_i0forward_frame_1 - 2.4e-05 24.0 0.1 3.5e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 Alba DegT_DnrJ_EryC1 PF01041.17 NODE_51036_length_357_cov_3.248447_g43128_i0reverse_frame_1 - 2.4e-29 102.8 0.1 2.7e-29 102.6 0.1 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family PaRep2b PF07775.11 NODE_51036_length_357_cov_3.248447_g43128_i0reverse_frame_1 - 0.026 13.0 0.0 0.031 12.8 0.0 1.1 1 0 0 1 1 1 0 PaRep2b protein Cytomega_US3 PF05963.11 NODE_51029_length_357_cov_4.944099_g43121_i0reverse_frame_1 - 0.07 12.8 0.3 0.12 12.0 0.3 1.4 1 0 0 1 1 1 0 Cytomegalovirus US3 protein PT PF04886.12 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_1 - 0.98 9.0 22.9 2.9 7.5 6.1 3.9 1 1 1 2 2 2 0 PT repeat FAM60A PF15396.6 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_1 - 2.7 8.0 11.6 3.3 7.7 11.6 1.1 1 0 0 1 1 1 0 Protein Family FAM60A CAML PF14963.6 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_1 - 4.5 7.3 9.0 5.1 7.1 9.0 1.0 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand SNURF PF07192.11 NODE_51025_length_357_cov_9.891304_g43117_i0reverse_frame_1 - 0.049 13.5 7.1 7.7 6.4 0.7 3.5 2 1 1 3 3 3 0 SNURF/RPN4 protein bZIP_1 PF00170.21 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.0012 18.9 0.3 0.0012 18.9 0.3 2.1 2 0 0 2 2 2 1 bZIP transcription factor ZapB PF06005.12 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.011 16.2 0.1 0.016 15.6 0.1 1.3 1 0 0 1 1 1 0 Cell division protein ZapB GIT_CC PF16559.5 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.017 15.0 1.6 0.034 14.0 1.5 1.5 1 1 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor Snapin_Pallidin PF14712.6 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.023 15.1 1.2 0.034 14.6 1.2 1.3 1 0 0 1 1 1 0 Snapin/Pallidin Vip3A_N PF12495.8 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.047 13.6 0.3 0.064 13.2 0.3 1.2 1 0 0 1 1 1 0 Vegetative insecticide protein 3A N terminal LPP PF04728.13 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.073 13.5 2.6 0.34 11.3 0.6 2.2 1 1 1 2 2 2 0 Lipoprotein leucine-zipper PspB PF06667.12 NODE_51013_length_357_cov_68.431677_g43105_i0reverse_frame_1 - 0.18 11.9 0.9 0.73 9.9 0.9 1.9 1 1 0 1 1 1 0 Phage shock protein B Trypsin PF00089.26 NODE_51010_length_357_cov_76.177019_g43102_i0forward_frame_1 - 0.025 14.4 0.0 0.027 14.3 0.0 1.1 1 0 0 1 1 1 0 Trypsin VSP PF03302.13 NODE_51002_length_357_cov_99.518634_g43094_i0forward_frame_1 - 0.0089 14.9 0.3 0.011 14.6 0.3 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein CD99L2 PF12301.8 NODE_51002_length_357_cov_99.518634_g43094_i0forward_frame_1 - 0.02 15.2 0.2 0.024 14.9 0.2 1.2 1 0 0 1 1 1 0 CD99 antigen like protein 2 Amnionless PF14828.6 NODE_51002_length_357_cov_99.518634_g43094_i0forward_frame_1 - 0.04 12.7 0.0 0.04 12.7 0.0 1.0 1 0 0 1 1 1 0 Amnionless MtrF PF09472.10 NODE_51002_length_357_cov_99.518634_g43094_i0forward_frame_1 - 0.05 13.0 1.3 0.26 10.7 0.4 2.1 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Glycophorin_A PF01102.18 NODE_51002_length_357_cov_99.518634_g43094_i0forward_frame_1 - 0.062 13.5 0.0 0.074 13.3 0.0 1.3 1 0 0 1 1 1 0 Glycophorin A Podoplanin PF05808.11 NODE_51002_length_357_cov_99.518634_g43094_i0forward_frame_1 - 0.1 12.7 0.5 0.17 12.0 0.5 1.3 1 0 0 1 1 1 0 Podoplanin Adeno_E3_CR2 PF02439.15 NODE_51002_length_357_cov_99.518634_g43094_i0forward_frame_1 - 1 9.2 5.9 1.8 8.4 5.9 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 zf-Tim10_DDP PF02953.15 NODE_50991_length_357_cov_302.928571_g43083_i0forward_frame_1 - 0.00024 20.7 4.3 0.00024 20.7 4.3 2.0 1 1 1 2 2 2 1 Tim10/DDP family zinc finger Proho_convert PF12177.8 NODE_50983_length_358_cov_1.374613_g43077_i0reverse_frame_2 - 0.14 12.1 1.5 0.2 11.7 1.5 1.2 1 0 0 1 1 1 0 Prohormone convertase enzyme Hum_adeno_E3A PF05393.11 NODE_50983_length_358_cov_1.374613_g43077_i0forward_frame_3 - 0.29 11.1 2.3 0.69 9.9 2.3 1.8 1 1 0 1 1 1 0 Human adenovirus early E3A glycoprotein XRCC4 PF06632.12 NODE_50981_length_358_cov_1.504644_g43075_i0reverse_frame_2 - 0.06 12.2 0.0 0.063 12.1 0.0 1.1 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 SNase PF00565.17 NODE_50978_length_358_cov_1.715170_g43072_i0reverse_frame_3 - 1.9e-06 28.3 0.0 2.5e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Staphylococcal nuclease homologue SRP54_N PF02881.19 NODE_50977_length_358_cov_1.733746_g43071_i0forward_frame_3 - 0.16 12.2 4.5 0.098 12.9 2.4 1.7 2 0 0 2 2 2 0 SRP54-type protein, helical bundle domain Neur_chan_memb PF02932.16 NODE_50975_length_358_cov_1.832817_g43069_i0forward_frame_3 - 5.8 6.9 5.1 6.2 6.8 5.1 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region SecM PF06558.12 NODE_50974_length_358_cov_1.842105_g43068_i0reverse_frame_3 - 0.15 12.2 0.3 0.19 11.8 0.3 1.1 1 0 0 1 1 1 0 Secretion monitor precursor protein (SecM) CRM1_repeat_3 PF18787.1 NODE_50974_length_358_cov_1.842105_g43068_i0reverse_frame_3 - 0.35 11.0 0.1 0.35 11.0 0.1 2.5 4 0 0 4 4 4 0 CRM1 / Exportin repeat 3 EAV_GP5 PF15981.5 NODE_50973_length_358_cov_2.030960_g43067_i0forward_frame_3 - 0.037 14.4 1.6 0.037 14.4 1.6 1.9 1 1 1 2 2 2 0 Envelope glycoprotein GP 5 of equine arteritis virus TMEM101 PF15111.6 NODE_50972_length_358_cov_2.074303_g43066_i0forward_frame_2 - 0.041 13.4 0.0 0.047 13.3 0.0 1.1 1 0 0 1 1 1 0 TMEM101 protein family MFS18 PF17352.2 NODE_50972_length_358_cov_2.074303_g43066_i0forward_frame_2 - 0.26 11.7 2.5 0.33 11.4 2.5 1.2 1 0 0 1 1 1 0 Male Flower Specific protein 18 Sugar_tr PF00083.24 NODE_50966_length_358_cov_2.173375_g43060_i0reverse_frame_3 - 2.1e-09 36.8 4.1 2.3e-09 36.7 4.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_50966_length_358_cov_2.173375_g43060_i0reverse_frame_3 - 1.4e-05 24.2 3.8 1.8e-05 23.9 3.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_50965_length_358_cov_2.263158_g43059_i0forward_frame_3 - 5.2e-06 25.6 0.1 2.4e-05 23.4 0.1 1.8 1 1 0 1 1 1 1 Sugar (and other) transporter GerE PF00196.19 NODE_50964_length_358_cov_2.331269_g43058_i0reverse_frame_2 - 0.0011 18.4 0.6 0.0016 18.0 0.6 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HR1 PF02185.16 NODE_50963_length_358_cov_2.362229_g43057_i0forward_frame_2 - 0.074 13.2 0.1 0.097 12.8 0.1 1.3 1 0 0 1 1 1 0 Hr1 repeat Thymosin PF01290.20 NODE_50962_length_358_cov_2.430341_g43056_i0forward_frame_2 - 0.025 14.3 0.1 0.69 9.7 0.0 2.2 2 0 0 2 2 2 0 Thymosin beta-4 family IU_nuc_hydro PF01156.19 NODE_50961_length_358_cov_2.603715_g43055_i0reverse_frame_3 - 1.8e-17 63.9 0.7 2.2e-17 63.6 0.7 1.1 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase AstE_AspA PF04952.14 NODE_50959_length_358_cov_2.832817_g43053_i0reverse_frame_3 - 3.2e-29 101.9 0.0 3.4e-29 101.8 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family CHASE8 PF17152.4 NODE_50959_length_358_cov_2.832817_g43053_i0forward_frame_3 - 0.044 14.0 0.0 0.056 13.7 0.0 1.1 1 0 0 1 1 1 0 Periplasmic sensor domain YabA PF06156.13 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.016 15.8 11.5 0.093 13.4 6.3 2.1 1 1 1 2 2 2 0 Initiation control protein YabA KASH_CCD PF14662.6 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.032 14.1 14.6 0.042 13.7 14.6 1.2 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH bZIP_1 PF00170.21 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.22 11.6 16.9 0.82 9.8 1.5 2.4 1 1 0 2 2 2 0 bZIP transcription factor ZapB PF06005.12 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.25 11.8 15.5 0.86 10.1 2.1 3.0 1 1 1 2 2 2 0 Cell division protein ZapB Cep57_CLD_2 PF14197.6 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.35 11.0 9.6 7.7 6.7 8.3 2.8 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 UPF0242 PF06785.11 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 2.1 8.4 14.9 1.1 9.3 3.1 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus CcmE PF03100.15 NODE_50941_length_358_cov_65.439628_g43035_i0forward_frame_3 - 1.4 8.9 4.5 0.67 10.0 1.0 2.1 1 1 2 3 3 3 0 CcmE Herpes_LMP1 PF05297.11 NODE_50941_length_358_cov_65.439628_g43035_i0forward_frame_3 - 2.2 7.4 8.2 2.5 7.2 8.2 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF2628 PF10947.8 NODE_50941_length_358_cov_65.439628_g43035_i0forward_frame_3 - 3.8 7.9 8.8 5.1 7.5 8.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) PPR_2 PF13041.6 NODE_50939_length_358_cov_80.526316_g43033_i0reverse_frame_3 - 0.058 13.6 0.0 0.1 12.8 0.0 1.5 1 0 0 1 1 1 0 PPR repeat family PPR_3 PF13812.6 NODE_50939_length_358_cov_80.526316_g43033_i0reverse_frame_3 - 0.13 12.3 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Pentatricopeptide repeat domain MSA-2c PF12238.8 NODE_50936_length_358_cov_92.201238_g43030_i0reverse_frame_3 - 0.39 10.7 1.3 0.43 10.5 1.3 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Curlin_rpt PF07012.12 NODE_50934_length_358_cov_94.873065_g43028_i0forward_frame_2 - 0.19 11.7 1.0 0.38 10.8 1.0 1.5 1 0 0 1 1 1 0 Curlin associated repeat SPO11_like PF03533.14 NODE_50928_length_358_cov_130.281734_g43022_i0forward_frame_2 - 0.011 15.8 0.0 0.045 13.9 0.0 1.9 2 0 0 2 2 2 0 SPO11 homologue Cytochrom_C1 PF02167.15 NODE_50926_length_358_cov_152.563467_g43020_i0forward_frame_2 - 0.033 13.9 0.0 0.036 13.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C1 family Adipogenin PF15202.6 NODE_50919_length_358_cov_245.606811_g43013_i0reverse_frame_3 - 1.6 8.8 5.4 0.21 11.6 0.6 1.8 1 1 1 2 2 2 0 Adipogenin MAGP PF05507.11 NODE_50914_length_358_cov_376.603715_g43009_i0reverse_frame_2 - 2.1 8.8 5.5 1.8 9.0 0.4 2.0 1 1 1 2 2 2 0 Microfibril-associated glycoprotein (MAGP) RCC1_2 PF13540.6 NODE_50914_length_358_cov_376.603715_g43009_i0forward_frame_3 - 4.3e-05 23.2 0.2 0.23 11.3 0.0 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 NODE_50914_length_358_cov_376.603715_g43009_i0forward_frame_3 - 5.3 7.1 6.4 3.1 7.9 0.4 2.8 3 0 0 3 3 3 0 PheRS DNA binding domain 2 PsbK PF02533.15 NODE_50912_length_358_cov_629.941176_g43007_i0reverse_frame_2 - 2.5e-20 72.3 6.4 3.8e-20 71.8 6.4 1.2 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component VasI PF11319.8 NODE_50912_length_358_cov_629.941176_g43007_i0forward_frame_2 - 0.032 13.9 0.5 0.04 13.6 0.5 1.1 1 0 0 1 1 1 0 Type VI secretion system VasI, EvfG, VC_A0118 Tfb4 PF03850.14 NODE_50906_length_359_cov_1.336420_g43001_i0reverse_frame_3 - 0.015 14.9 1.8 0.016 14.7 1.8 1.0 1 0 0 1 1 1 0 Transcription factor Tfb4 COX5A PF02284.16 NODE_50906_length_359_cov_1.336420_g43001_i0reverse_frame_2 - 0.0051 16.8 0.0 0.0067 16.4 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c oxidase subunit Va Retrotrans_gag PF03732.17 NODE_50904_length_359_cov_1.549383_g42999_i0reverse_frame_3 - 0.022 15.0 0.5 0.04 14.2 0.5 1.4 1 0 0 1 1 1 0 Retrotransposon gag protein BAT2_N PF07001.11 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_3 - 0.072 13.5 2.0 0.077 13.5 2.0 1.1 1 0 0 1 1 1 0 BAT2 N-terminus Tir_receptor_C PF07489.11 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_3 - 0.72 9.8 10.5 0.98 9.4 10.5 1.3 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) C-terminus DUF2207 PF09972.9 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_3 - 5.7 5.6 5.7 6.1 5.5 5.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Wzy_C PF04932.15 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 0.08 12.6 2.2 0.12 12.0 2.2 1.2 1 0 0 1 1 1 0 O-Antigen ligase Amnionless PF14828.6 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 0.2 10.4 3.9 0.21 10.4 3.9 1.1 1 0 0 1 1 1 0 Amnionless G3P_acyltransf PF02660.15 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 0.24 11.5 9.3 0.28 11.2 9.3 1.2 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase Cyt_bd_oxida_II PF02322.15 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 1.5 8.1 16.7 1.6 8.0 16.7 1.0 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit II TMEM154 PF15102.6 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 1.8 8.4 7.8 2.5 8.0 7.8 1.2 1 0 0 1 1 1 0 TMEM154 protein family Baculo_11_kDa PF06143.11 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 2.2 7.9 11.8 3.3 7.4 11.8 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family PMT_4TMC PF16192.5 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 2.3 7.7 5.2 3.1 7.3 5.2 1.1 1 0 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase Shisa PF13908.6 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 8.9 6.5 9.5 12 6.1 9.5 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Tmemb_9 PF05434.11 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 9.2 6.1 8.8 12 5.7 8.8 1.1 1 0 0 1 1 1 0 TMEM9 Yippee-Mis18 PF03226.14 NODE_50900_length_359_cov_1.712963_g42995_i0reverse_frame_2 - 0.089 13.0 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Pkinase PF00069.25 NODE_50900_length_359_cov_1.712963_g42995_i0forward_frame_3 - 1.1e-36 126.5 0.0 1.3e-36 126.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50900_length_359_cov_1.712963_g42995_i0forward_frame_3 - 1.1e-15 57.6 0.0 1.4e-15 57.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_50900_length_359_cov_1.712963_g42995_i0forward_frame_3 - 0.012 14.4 0.0 0.014 14.2 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase Kinase-like PF14531.6 NODE_50900_length_359_cov_1.712963_g42995_i0forward_frame_3 - 0.033 13.5 0.0 0.043 13.1 0.0 1.3 1 1 0 1 1 1 0 Kinase-like APH PF01636.23 NODE_50900_length_359_cov_1.712963_g42995_i0forward_frame_3 - 0.16 11.8 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family NECFESHC PF16621.5 NODE_50891_length_359_cov_1.956790_g42986_i0forward_frame_2 - 0.011 15.7 0.9 0.38 10.7 0.1 2.4 2 0 0 2 2 2 0 SH3 terminal domain of 2nd SH3 on Neutrophil cytosol factor 1 Aminotran_1_2 PF00155.21 NODE_50885_length_359_cov_2.314815_g42980_i0forward_frame_2 - 9.9e-11 41.4 0.0 1.2e-10 41.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II HeH PF12949.7 NODE_50885_length_359_cov_2.314815_g42980_i0forward_frame_2 - 0.11 12.3 0.1 0.24 11.1 0.1 1.6 1 0 0 1 1 1 0 HeH/LEM domain Aminotran_MocR PF12897.7 NODE_50885_length_359_cov_2.314815_g42980_i0forward_frame_2 - 0.18 10.5 0.0 0.21 10.3 0.0 1.0 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks195.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks195.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks195.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks195.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- WBP-1 PF11669.8 NODE_50884_length_359_cov_2.367284_g42979_i0reverse_frame_3 - 0.041 14.5 0.1 0.052 14.2 0.1 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 Ion_trans_2 PF07885.16 NODE_50884_length_359_cov_2.367284_g42979_i0forward_frame_2 - 2.8e-07 30.4 6.0 1.3e-06 28.2 6.0 2.0 1 1 0 1 1 1 1 Ion channel IRK PF01007.20 NODE_50884_length_359_cov_2.367284_g42979_i0forward_frame_2 - 0.0005 19.9 0.4 0.00064 19.6 0.4 1.1 1 0 0 1 1 1 1 Inward rectifier potassium channel transmembrane domain MSSP PF03940.13 NODE_50877_length_359_cov_2.962963_g42972_i0reverse_frame_3 - 0.18 11.4 7.2 0.16 11.6 4.4 2.0 2 0 0 2 2 2 0 Male specific sperm protein BTB PF00651.31 NODE_50874_length_359_cov_3.083333_g42969_i0reverse_frame_3 - 1.7e-10 41.1 0.2 2.2e-10 40.7 0.2 1.2 1 0 0 1 1 1 1 BTB/POZ domain Trypan_PARP PF05887.11 NODE_50871_length_359_cov_4.024691_g42966_i0reverse_frame_3 - 0.014 15.3 1.5 0.018 15.1 1.5 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Peptidase_C93 PF06035.11 NODE_50870_length_359_cov_5.614198_g42965_i0forward_frame_3 - 0.014 15.2 0.1 0.017 14.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP TauE PF01925.19 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 0.011 15.4 5.9 0.024 14.2 5.9 1.6 1 1 0 1 1 1 0 Sulfite exporter TauE/SafE Adeno_E3B PF03376.14 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 0.11 12.7 6.3 0.91 9.8 0.8 2.4 2 0 0 2 2 2 0 Adenovirus E3B protein Chitin_synth_2 PF03142.15 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 0.32 9.6 6.1 0.37 9.3 6.1 1.0 1 0 0 1 1 1 0 Chitin synthase DUF4282 PF14110.6 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 0.5 11.1 8.6 0.75 10.6 8.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4282) ALMT PF11744.8 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 3.1 6.5 8.0 3.4 6.4 8.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Actino_peptide PF14408.6 NODE_50866_length_359_cov_28.444444_g42961_i0forward_frame_2 - 0.0032 17.5 0.2 0.0046 17.0 0.2 1.2 1 0 0 1 1 1 1 Ribosomally synthesised peptide in actinomycetes Trypan_PARP PF05887.11 NODE_50864_length_359_cov_48.407407_g42959_i0reverse_frame_3 - 1.4 8.9 5.1 1.6 8.7 5.1 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) NPR3 PF03666.13 NODE_50864_length_359_cov_48.407407_g42959_i0reverse_frame_3 - 6.6 5.4 9.3 6.4 5.4 9.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CRISPR_Cse1 PF09481.10 NODE_50863_length_359_cov_51.666667_g42958_i0reverse_frame_3 - 0.01 14.9 0.3 0.013 14.7 0.3 1.0 1 0 0 1 1 1 0 CRISPR-associated protein Cse1 (CRISPR_cse1) DUF1367 PF07105.11 NODE_50853_length_359_cov_77.722222_g42948_i0reverse_frame_2 - 0.11 12.2 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1367) Fijivirus_P9-2 PF06837.11 NODE_50852_length_359_cov_78.287037_g42947_i0forward_frame_3 - 1.9 7.9 11.9 2.1 7.8 11.9 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein Nipped-B_C PF12830.7 NODE_50849_length_359_cov_79.768519_g42944_i0reverse_frame_3 - 0.049 13.6 0.2 0.061 13.3 0.2 1.1 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus DUF4065 PF13274.6 NODE_50849_length_359_cov_79.768519_g42944_i0reverse_frame_2 - 0.21 12.5 6.0 0.37 11.7 5.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) Connexin PF00029.19 NODE_50849_length_359_cov_79.768519_g42944_i0reverse_frame_2 - 0.57 9.9 5.0 0.68 9.6 5.0 1.1 1 0 0 1 1 1 0 Connexin DUF2244 PF10003.9 NODE_50849_length_359_cov_79.768519_g42944_i0forward_frame_3 - 2.2 7.9 5.3 3.2 7.4 5.3 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) SUR7 PF06687.12 NODE_50849_length_359_cov_79.768519_g42944_i0forward_frame_2 - 0.13 11.9 16.0 0.16 11.6 16.0 1.1 1 0 0 1 1 1 0 SUR7/PalI family Clathrin PF00637.20 NODE_50843_length_359_cov_89.938272_g42938_i0forward_frame_3 - 0.0015 18.4 0.0 0.3 10.9 0.0 2.1 1 1 1 2 2 2 2 Region in Clathrin and VPS TPR_19 PF14559.6 NODE_50843_length_359_cov_89.938272_g42938_i0forward_frame_3 - 0.033 14.7 0.1 3.1 8.4 0.0 2.8 2 1 0 2 2 2 0 Tetratricopeptide repeat AID PF18767.1 NODE_50841_length_359_cov_105.141975_g42936_i0forward_frame_3 - 0.03 14.3 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 Activation induced deaminase 2-Hacid_dh_C PF02826.19 NODE_50837_length_359_cov_128.179012_g42932_i0reverse_frame_3 - 1.6e-12 47.1 0.0 2.9e-12 46.3 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Nudix_N_2 PF14803.6 NODE_50836_length_359_cov_157.015432_g42931_i0forward_frame_3 - 0.074 13.0 0.9 0.19 11.7 0.1 2.1 2 1 1 3 3 3 0 Nudix N-terminal Actino_peptide PF14408.6 NODE_50836_length_359_cov_157.015432_g42931_i0forward_frame_2 - 1.2 9.3 11.7 0.17 12.0 2.0 2.2 2 0 0 2 2 2 0 Ribosomally synthesised peptide in actinomycetes KOW PF00467.29 NODE_50835_length_359_cov_164.864198_g42930_i0reverse_frame_3 - 0.026 14.5 0.5 0.043 13.8 0.1 1.5 2 0 0 2 2 2 0 KOW motif IL3 PF02059.15 NODE_50834_length_359_cov_172.756173_g42929_i0reverse_frame_3 - 0.023 14.8 0.3 0.027 14.5 0.3 1.2 1 0 0 1 1 1 0 Interleukin-3 Paramyxo_P_V_N PF13825.6 NODE_50834_length_359_cov_172.756173_g42929_i0reverse_frame_3 - 0.031 13.7 0.6 0.035 13.5 0.6 1.0 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus Pox_Ag35 PF03286.14 NODE_50832_length_359_cov_226.503086_g42927_i0forward_frame_3 - 0.0059 16.4 0.6 0.007 16.2 0.6 1.1 1 0 0 1 1 1 1 Pox virus Ag35 surface protein Dishevelled PF02377.15 NODE_50832_length_359_cov_226.503086_g42927_i0forward_frame_3 - 0.55 10.7 5.0 1.3 9.5 5.2 1.5 1 1 0 1 1 1 0 Dishevelled specific domain PA14 PF07691.12 NODE_50831_length_359_cov_298.694444_g42926_i0forward_frame_3 - 1.9e-14 53.7 0.0 2.2e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 NODE_50831_length_359_cov_298.694444_g42926_i0forward_frame_3 - 0.0091 16.4 0.0 0.014 15.9 0.0 1.3 1 0 0 1 1 1 1 GLEYA domain Peptidase_C62 PF12380.8 NODE_50822_length_360_cov_1.735385_g42917_i0forward_frame_2 - 0.11 11.6 0.0 0.17 10.9 0.0 1.3 2 0 0 2 2 2 0 Gill-associated viral 3C-like peptidase MotB_plug PF13677.6 NODE_50821_length_360_cov_1.778462_g42916_i0reverse_frame_3 - 2.7 7.6 9.0 0.43 10.2 3.8 2.1 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB DUF2500 PF10694.9 NODE_50821_length_360_cov_1.778462_g42916_i0forward_frame_2 - 0.74 10.3 3.8 0.8 10.2 3.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2500) Hydin_ADK PF17213.3 NODE_50821_length_360_cov_1.778462_g42916_i0forward_frame_2 - 1.1 9.5 6.9 1.1 9.5 6.9 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain Presenilin PF01080.17 NODE_50821_length_360_cov_1.778462_g42916_i0forward_frame_2 - 8.2 5.1 11.9 8.6 5.0 11.9 1.0 1 0 0 1 1 1 0 Presenilin Erf4 PF10256.9 NODE_50813_length_360_cov_2.261538_g42908_i0reverse_frame_3 - 0.047 13.8 0.4 0.07 13.2 0.4 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family DUF2207 PF09972.9 NODE_50813_length_360_cov_2.261538_g42908_i0forward_frame_2 - 0.1 11.3 2.8 0.13 11.0 2.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5381 PF17353.2 NODE_50813_length_360_cov_2.261538_g42908_i0forward_frame_2 - 0.37 10.5 6.4 0.43 10.3 6.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) DUF5383 PF17355.2 NODE_50812_length_360_cov_2.332308_g42907_i0forward_frame_2 - 0.17 12.2 5.2 0.066 13.6 2.6 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5383) EF-hand_6 PF13405.6 NODE_50811_length_360_cov_2.710769_g42906_i0reverse_frame_3 - 0.058 13.4 0.2 0.33 11.0 0.1 2.3 2 0 0 2 2 2 0 EF-hand domain AcetylCoA_hyd_C PF13336.6 NODE_50810_length_360_cov_3.052308_g42905_i0reverse_frame_3 - 8.3e-05 22.6 0.0 0.00012 22.1 0.0 1.2 1 0 0 1 1 1 1 Acetyl-CoA hydrolase/transferase C-terminal domain UPF0061 PF02696.14 NODE_50809_length_360_cov_3.135385_g42904_i0reverse_frame_2 - 0.022 13.5 0.0 0.027 13.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family hemP PF10636.9 NODE_50809_length_360_cov_3.135385_g42904_i0forward_frame_3 - 1.6e-14 53.4 0.7 2.6e-14 52.7 0.7 1.4 1 0 0 1 1 1 1 Hemin uptake protein hemP WD40 PF00400.32 NODE_50805_length_360_cov_3.467692_g42900_i0reverse_frame_2 - 2e-08 34.8 0.6 0.12 13.3 0.0 3.1 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_50805_length_360_cov_3.467692_g42900_i0reverse_frame_2 - 0.0061 16.8 0.3 0.13 12.6 0.0 2.3 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain VTC PF09359.10 NODE_50805_length_360_cov_3.467692_g42900_i0reverse_frame_2 - 0.048 13.1 0.1 0.063 12.7 0.1 1.1 1 0 0 1 1 1 0 VTC domain eIF2A PF08662.11 NODE_50802_length_360_cov_3.800000_g42897_i0forward_frame_2 - 0.016 15.1 0.1 0.028 14.3 0.0 1.4 2 0 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A Pex16 PF08610.10 NODE_50800_length_360_cov_8.483077_g42895_i0reverse_frame_3 - 0.07 12.3 0.4 0.076 12.2 0.4 1.0 1 0 0 1 1 1 0 Peroxisomal membrane protein (Pex16) PDDEXK_6 PF04720.12 NODE_50800_length_360_cov_8.483077_g42895_i0reverse_frame_3 - 0.26 11.2 5.5 0.3 11.0 5.5 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function PRP1_N PF06424.12 NODE_50800_length_360_cov_8.483077_g42895_i0reverse_frame_3 - 0.47 10.8 11.3 0.54 10.6 11.3 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal CDC45 PF02724.14 NODE_50800_length_360_cov_8.483077_g42895_i0reverse_frame_3 - 2.2 6.5 10.6 2.5 6.3 10.6 1.0 1 0 0 1 1 1 0 CDC45-like protein CENP-I PF07778.11 NODE_50800_length_360_cov_8.483077_g42895_i0reverse_frame_3 - 4.3 5.9 8.6 5.2 5.7 8.6 1.0 1 0 0 1 1 1 0 Mis6 DUF2149 PF09919.9 NODE_50796_length_360_cov_50.147692_g42891_i0forward_frame_3 - 0.061 13.6 0.8 0.09 13.0 0.8 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) START PF01852.19 NODE_50792_length_360_cov_68.636923_g42887_i0reverse_frame_2 - 0.036 13.5 0.6 0.046 13.1 0.6 1.1 1 0 0 1 1 1 0 START domain TMEM95 PF15203.6 NODE_50792_length_360_cov_68.636923_g42887_i0reverse_frame_2 - 0.053 13.2 0.2 0.088 12.4 0.2 1.3 1 0 0 1 1 1 0 TMEM95 family PLC-beta_C PF08703.10 NODE_50789_length_360_cov_72.716923_g42884_i0reverse_frame_3 - 0.002 18.1 0.1 0.0027 17.7 0.1 1.3 1 0 0 1 1 1 1 PLC-beta C terminal MTCP1 PF08991.10 NODE_50778_length_360_cov_108.683077_g42873_i0reverse_frame_3 - 0.51 10.6 6.0 1.1 9.5 0.1 2.2 2 0 0 2 2 2 0 Mature-T-Cell Proliferation I type UPF0020 PF01170.18 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 2e-08 34.2 0.0 7.5e-07 29.0 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 4.7e-07 30.4 0.0 6e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 7.8e-06 26.5 0.0 1.1e-05 26.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.00021 21.1 0.0 0.00024 20.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.00069 19.4 0.0 0.00097 18.9 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Cons_hypoth95 PF03602.15 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.0041 16.8 0.0 0.0046 16.6 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 CMAS PF02353.20 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.006 15.9 0.0 0.0072 15.7 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Met_10 PF02475.16 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.0068 16.2 0.0 0.0083 15.9 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_2 PF00891.18 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.12 11.7 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 O-methyltransferase domain Methyltransf_15 PF09445.10 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.21 11.1 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase DUF2066 PF09839.9 NODE_50770_length_360_cov_169.181538_g42865_i0reverse_frame_2 - 0.031 13.7 0.0 0.039 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2066) DUF1402 PF07182.11 NODE_50767_length_360_cov_241.024615_g42862_i0forward_frame_3 - 0.073 12.2 0.1 0.087 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1402) Alpha-2-MRAP_C PF06401.11 NODE_50767_length_360_cov_241.024615_g42862_i0forward_frame_3 - 0.079 12.9 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain Peptidase_M29 PF02073.15 NODE_50764_length_360_cov_324.326154_g42859_i0reverse_frame_3 - 0.091 11.5 0.5 0.096 11.4 0.5 1.0 1 0 0 1 1 1 0 Thermophilic metalloprotease (M29) DUF2868 PF11067.8 NODE_50764_length_360_cov_324.326154_g42859_i0reverse_frame_3 - 0.38 10.2 3.7 0.44 10.0 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) FAP PF07174.11 NODE_50764_length_360_cov_324.326154_g42859_i0reverse_frame_3 - 2.8 7.3 14.8 3.4 7.0 14.8 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Keratin_2_head PF16208.5 NODE_50764_length_360_cov_324.326154_g42859_i0forward_frame_3 - 0.043 14.0 14.1 0.062 13.5 14.1 1.2 1 0 0 1 1 1 0 Keratin type II head SSP160 PF06933.11 ORF98873 - 5.3e-05 21.6 13.6 5.8e-05 21.5 13.6 1.0 1 0 0 1 1 1 1 Special lobe-specific silk protein SSP160 MGC-24 PF05283.11 ORF98873 - 0.0067 16.9 3.6 0.0078 16.7 3.6 1.1 1 0 0 1 1 1 1 Multi-glycosylated core protein 24 (MGC-24), sialomucin RAP1 PF07218.11 ORF98873 - 0.3 9.3 7.8 0.32 9.2 7.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF515 PF04415.12 ORF98873 - 7.7 4.8 8.5 8.3 4.7 8.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) YqfD PF06898.11 ORF97541 - 0.072 11.9 1.2 0.085 11.7 1.2 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD DUF1422 PF07226.11 ORF96828 - 4.7e-54 181.3 1.1 5.2e-54 181.1 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1422) Bax1-I PF01027.20 ORF96828 - 0.0057 16.5 4.1 0.0069 16.2 4.1 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 AI-2E_transport PF01594.16 ORF967 - 0.22 10.7 0.1 0.27 10.3 0.1 1.1 1 0 0 1 1 1 0 AI-2E family transporter DUF5599 PF18141.1 ORF94653 - 0.096 12.9 0.1 0.13 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5599) Vps39_1 PF10366.9 ORF94644 - 0.16 12.3 2.6 0.3 11.4 1.0 1.8 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 1 CRISPR_Cse1 PF09481.10 ORF94288 - 0.019 14.1 0.5 0.023 13.8 0.5 1.0 1 0 0 1 1 1 0 CRISPR-associated protein Cse1 (CRISPR_cse1) vATP-synt_E PF01991.18 ORF93625 - 4.6e-12 45.8 12.4 5e-12 45.6 12.4 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit Fez1 PF06818.15 ORF93625 - 0.003 18.0 6.8 0.0036 17.8 6.8 1.0 1 0 0 1 1 1 1 Fez1 AKAP95 PF04988.12 ORF93625 - 0.0033 17.7 3.2 0.0039 17.4 3.2 1.1 1 0 0 1 1 1 1 A-kinase anchoring protein 95 (AKAP95) LUC7 PF03194.15 ORF93625 - 0.08 12.6 7.2 0.094 12.4 7.2 1.1 1 0 0 1 1 1 0 LUC7 N_terminus YqbF PF14553.6 ORF92131 - 0.075 12.9 0.9 0.18 11.7 0.9 1.7 1 0 0 1 1 1 0 YqbF, hypothetical protein domain DUF3018 PF11455.8 ORF92131 - 0.084 12.8 1.2 1.8 8.6 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3018) DUF2252 PF10009.9 ORF92131 - 2.8 6.9 7.6 3.3 6.7 7.6 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) Ribosomal_L29 PF00831.23 ORF91961 - 0.022 14.7 1.3 0.039 13.9 1.3 1.4 1 0 0 1 1 1 0 Ribosomal L29 protein DUF4749 PF15936.5 ORF90004 - 0.0056 17.8 0.3 0.0067 17.5 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4749) DUF2715 PF10895.8 ORF89659 - 0.018 14.7 1.2 0.021 14.4 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) Ribosomal_L11 PF00298.19 ORF89579 - 0.095 13.2 0.1 0.14 12.6 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain Vps36-NZF-N PF16988.5 ORF8916 - 0.87 9.0 11.7 0.05 13.0 4.8 2.4 3 0 0 3 3 3 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-RanBP PF00641.18 ORF8916 - 1.3 8.4 11.1 1.3 8.5 5.4 2.7 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Pirin_C_2 PF17954.1 ORF86868 - 4.4e-22 78.1 0.0 5.4e-22 77.8 0.0 1.1 1 0 0 1 1 1 1 Quercetinase C-terminal cupin domain Fumarate_red_D PF02313.17 ORF86346 - 1.6e-51 173.2 6.7 1.8e-51 173.0 6.7 1.0 1 0 0 1 1 1 1 Fumarate reductase subunit D Ras PF00071.22 ORF86242 - 3.4e-39 134.0 0.1 3.8e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF86242 - 5.1e-32 110.6 0.1 6e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF86242 - 1.9e-11 43.7 0.0 2e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF86242 - 3.2e-08 33.6 0.0 3.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF86242 - 3.1e-05 23.5 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF86242 - 0.00016 21.3 0.1 0.023 14.2 0.0 2.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF86242 - 0.00099 18.6 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF86242 - 0.0014 18.9 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF86242 - 0.0021 18.5 0.0 0.0027 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 ORF86242 - 0.0023 17.7 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF86242 - 0.0028 17.4 0.2 0.004 16.9 0.2 1.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF86242 - 0.0028 17.6 0.1 0.0058 16.5 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF86242 - 0.0032 17.1 0.0 0.0035 16.9 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 ORF86242 - 0.0035 16.9 0.1 0.0044 16.5 0.1 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF86242 - 0.007 16.1 0.0 0.012 15.4 0.0 1.4 2 0 0 2 2 1 1 Sigma-54 interaction domain Septin PF00735.18 ORF86242 - 0.0091 15.3 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 1 Septin NACHT PF05729.12 ORF86242 - 0.0092 15.9 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 ORF86242 - 0.015 15.8 0.2 0.02 15.4 0.2 1.4 1 1 0 1 1 1 0 ABC transporter TniB PF05621.11 ORF86242 - 0.016 14.6 0.1 0.022 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RNA_helicase PF00910.22 ORF86242 - 0.076 13.4 0.1 0.11 12.9 0.1 1.4 1 1 0 1 1 1 0 RNA helicase DAP3 PF10236.9 ORF86242 - 0.082 12.1 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_14 PF13173.6 ORF86242 - 0.082 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain MCM PF00493.23 ORF86242 - 0.087 11.9 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_5 PF07728.14 ORF86242 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF86242 - 0.11 11.7 0.1 0.13 11.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF86242 - 0.11 12.3 0.1 0.25 11.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 ORF86242 - 0.12 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B Hepatitis_core PF00906.20 ORF85258 - 0.057 13.0 0.0 0.061 12.9 0.0 1.0 1 0 0 1 1 1 0 Hepatitis core antigen GAF_2 PF13185.6 ORF85258 - 0.17 12.2 0.0 0.2 12.0 0.0 1.1 1 0 0 1 1 1 0 GAF domain CBM49 PF09478.10 ORF852 - 0.044 14.1 0.7 0.23 11.8 0.3 2.1 1 1 1 2 2 2 0 Carbohydrate binding domain CBM49 Ras PF00071.22 ORF85105 - 3.4e-39 134.0 0.1 3.8e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF85105 - 5.1e-32 110.6 0.1 6e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF85105 - 1.9e-11 43.7 0.0 2e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF85105 - 3.2e-08 33.6 0.0 3.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF85105 - 3.1e-05 23.5 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF85105 - 0.00016 21.3 0.1 0.023 14.2 0.0 2.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF85105 - 0.00099 18.6 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF85105 - 0.0014 18.9 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF85105 - 0.0021 18.5 0.0 0.0027 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 ORF85105 - 0.0023 17.7 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF85105 - 0.0028 17.4 0.2 0.004 16.9 0.2 1.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF85105 - 0.0028 17.6 0.1 0.0058 16.5 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF85105 - 0.0032 17.1 0.0 0.0035 16.9 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 ORF85105 - 0.0035 16.9 0.1 0.0044 16.5 0.1 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF85105 - 0.007 16.1 0.0 0.012 15.4 0.0 1.4 2 0 0 2 2 1 1 Sigma-54 interaction domain Septin PF00735.18 ORF85105 - 0.0091 15.3 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 1 Septin NACHT PF05729.12 ORF85105 - 0.0092 15.9 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 ORF85105 - 0.015 15.8 0.2 0.02 15.4 0.2 1.4 1 1 0 1 1 1 0 ABC transporter TniB PF05621.11 ORF85105 - 0.016 14.6 0.1 0.022 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RNA_helicase PF00910.22 ORF85105 - 0.076 13.4 0.1 0.11 12.9 0.1 1.4 1 1 0 1 1 1 0 RNA helicase DAP3 PF10236.9 ORF85105 - 0.082 12.1 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_14 PF13173.6 ORF85105 - 0.082 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain MCM PF00493.23 ORF85105 - 0.087 11.9 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_5 PF07728.14 ORF85105 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF85105 - 0.11 11.7 0.1 0.13 11.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF85105 - 0.11 12.3 0.1 0.25 11.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 ORF85105 - 0.12 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B zf-RING_2 PF13639.6 ORF84465 - 5.4e-14 52.3 6.2 8.3e-14 51.7 6.2 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF84465 - 4.7e-11 42.2 4.4 4.7e-11 42.2 4.4 1.7 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF84465 - 9.9e-09 35.4 7.6 3e-08 33.8 7.6 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF84465 - 2e-08 33.9 6.0 3.7e-08 33.1 6.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF84465 - 6e-07 29.4 3.4 1.4e-06 28.2 0.9 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF84465 - 7.7e-07 28.9 3.4 1.1e-06 28.4 3.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF84465 - 1.2e-06 28.3 4.3 1.9e-06 27.7 4.3 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF84465 - 2.3e-06 27.4 7.2 4.2e-06 26.5 7.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF84465 - 9.4e-05 22.5 7.6 0.0052 16.9 7.6 2.2 1 1 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 ORF84465 - 0.00022 21.3 6.0 0.00037 20.6 6.0 1.4 1 0 0 1 1 1 1 RING-variant domain Prok-RING_4 PF14447.6 ORF84465 - 0.0003 20.6 5.9 0.00066 19.5 5.5 1.7 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF84465 - 0.00034 20.6 4.1 0.0014 18.6 4.1 2.0 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF84465 - 0.0029 17.2 2.3 0.0052 16.4 2.3 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Baculo_RING PF05883.11 ORF84465 - 0.0081 16.2 0.5 0.0092 16.0 0.5 1.2 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain Prok-RING_1 PF14446.6 ORF84465 - 0.01 15.8 4.6 0.15 12.0 1.1 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-RING_4 PF14570.6 ORF84465 - 0.012 15.4 4.7 0.019 14.7 4.7 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain C1_1 PF00130.22 ORF84465 - 0.017 15.0 1.5 0.38 10.7 0.2 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RVT PF13966.6 ORF84465 - 0.1 13.3 2.1 2.4 9.0 0.1 2.3 1 1 1 2 2 2 0 zinc-binding in reverse transcriptase Zf_RING PF16744.5 ORF84465 - 0.26 11.4 3.3 0.69 10.1 3.2 1.7 1 1 0 1 1 1 0 KIAA1045 RING finger zf-P11 PF03854.14 ORF84465 - 0.56 9.9 6.5 1.5 8.5 6.5 1.7 1 1 0 1 1 1 0 P-11 zinc finger zf-C3H2C3 PF17122.5 ORF84465 - 1.4 9.0 6.5 0.16 12.0 1.7 1.9 2 1 0 2 2 2 0 Zinc-finger SSP160 PF06933.11 ORF83381 - 5.3e-05 21.6 13.6 5.8e-05 21.5 13.6 1.0 1 0 0 1 1 1 1 Special lobe-specific silk protein SSP160 MGC-24 PF05283.11 ORF83381 - 0.0067 16.9 3.6 0.0078 16.7 3.6 1.1 1 0 0 1 1 1 1 Multi-glycosylated core protein 24 (MGC-24), sialomucin RAP1 PF07218.11 ORF83381 - 0.3 9.3 7.8 0.32 9.2 7.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF515 PF04415.12 ORF83381 - 7.7 4.8 8.5 8.3 4.7 8.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) MoeA_N PF03453.17 ORF83308 - 0.089 12.6 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 MoeA N-terminal region (domain I and II) DUF629 PF04780.12 ORF83118 - 7.1 5.0 8.7 9.1 4.7 8.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF629) DUF3099 PF11298.8 ORF8249 - 0.15 12.3 0.2 0.24 11.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) RNA_pol_Rpb6 PF01192.22 ORF82079 - 4e-15 55.5 0.1 6.6e-15 54.8 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb6 Proteasome PF00227.26 ORF82034 - 2.2e-28 99.1 0.0 2.6e-28 98.8 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit FKBP_C PF00254.28 ORF81739 - 5e-28 97.3 0.0 7.3e-28 96.7 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase p31comet PF06581.12 ORF81571 - 0.022 14.0 0.0 0.026 13.7 0.0 1.1 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding DUF2777 PF10949.8 ORF79319 - 0.02 14.6 0.8 0.034 13.8 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2777) Ribosomal_60s PF00428.19 ORF7843 - 2e-20 73.2 5.7 2.5e-20 72.9 5.7 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein Me-amine-dh_L PF02975.14 ORF78341 - 0.15 12.5 3.8 0.19 12.2 3.8 1.1 1 0 0 1 1 1 0 Methylamine dehydrogenase, L chain Filament PF00038.21 ORF76062 - 0.0071 16.0 5.2 0.0082 15.8 5.2 1.0 1 0 0 1 1 1 1 Intermediate filament protein LSDAT_euk PF18139.1 ORF76062 - 0.054 12.9 0.1 0.079 12.3 0.1 1.2 1 0 0 1 1 1 0 SLOG in TRPM HALZ PF02183.18 ORF76062 - 0.074 13.3 6.9 0.68 10.2 0.4 2.4 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF1640 PF07798.11 ORF76062 - 0.094 12.8 6.9 1.2 9.1 1.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) YabA PF06156.13 ORF76062 - 0.17 12.5 8.2 3.4 8.4 2.1 2.1 1 1 1 2 2 2 0 Initiation control protein YabA IFP_35_N PF07334.13 ORF76062 - 0.58 10.3 4.3 0.89 9.7 0.4 2.2 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus bZIP_1 PF00170.21 ORF76062 - 0.65 10.1 7.1 6 7.0 0.4 2.3 2 0 0 2 2 2 0 bZIP transcription factor bZIP_2 PF07716.15 ORF76062 - 10 6.3 8.7 13 6.0 1.1 2.3 2 0 0 2 2 2 0 Basic region leucine zipper DIOX_N PF14226.6 ORF75470 - 0.11 13.3 0.0 0.14 12.9 0.0 1.3 1 0 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal RecG_N PF17190.4 ORF75470 - 0.11 13.2 3.2 0.22 12.3 1.0 2.0 2 0 0 2 2 2 0 RecG N-terminal helical domain MTTB PF06253.11 ORF75352 - 0.12 10.4 0.0 0.17 9.8 0.0 1.2 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) DUF3687 PF12459.8 ORF75252 - 0.0045 16.5 0.7 0.0045 16.5 0.7 2.3 3 0 0 3 3 3 1 D-Ala-teichoic acid biosynthesis protein Ion_trans_2 PF07885.16 ORF74939 - 5.1e-11 42.4 5.5 6.2e-11 42.1 5.5 1.2 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF74939 - 3.3e-05 23.3 5.9 5.2e-05 22.6 5.9 1.3 1 1 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 ORF74939 - 0.00031 20.6 0.4 0.00034 20.5 0.4 1.1 1 0 0 1 1 1 1 Ligand-gated ion channel STAR_dimer PF16544.5 ORF74939 - 0.083 12.5 0.5 0.23 11.1 0.0 1.8 2 0 0 2 2 2 0 Homodimerisation region of STAR domain protein ATP_sub_h PF10775.9 ORF74806 - 4.9 7.2 7.7 1.4 9.0 1.6 2.3 2 0 0 2 2 2 0 ATP synthase complex subunit h sCache_2 PF17200.4 ORF7462 - 0.021 14.7 0.2 0.023 14.5 0.2 1.1 1 0 0 1 1 1 0 Single Cache domain 2 LCE6A PF15858.5 ORF74094 - 0.49 11.2 7.8 1.9 9.3 0.1 2.4 1 1 1 2 2 2 0 Late cornified envelope protein 6A family PX PF00787.24 ORF71815 - 0.022 14.7 0.2 0.028 14.4 0.2 1.3 1 0 0 1 1 1 0 PX domain HipN PF18253.1 ORF71815 - 0.037 13.7 0.1 0.075 12.7 0.1 1.5 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain PaaX_C PF08223.11 ORF71815 - 0.094 13.0 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 PaaX-like protein C-terminal domain PRA-PH PF01503.17 ORF71815 - 0.094 13.2 0.0 0.14 12.6 0.0 1.4 1 1 0 1 1 1 0 Phosphoribosyl-ATP pyrophosphohydrolase DUF4972 PF16342.5 ORF71815 - 0.81 9.4 3.6 0.16 11.6 0.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4972) DUF1422 PF07226.11 ORF7177 - 0.51 10.4 6.2 0.29 11.2 2.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1422) LysM PF01476.20 ORF71618 - 3e-06 27.2 0.0 4.6e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 LysM domain Rota_NS53 PF00981.17 ORF7003 - 8.6 5.1 12.7 10 4.9 12.7 1.1 1 0 0 1 1 1 0 Rotavirus RNA-binding Protein 53 (NS53) TRP PF06011.12 ORF6971 - 4.6e-05 22.3 1.0 5.8e-05 22.0 1.0 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF2781 PF10914.8 ORF6971 - 0.00052 20.4 2.4 0.00058 20.3 2.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2781) DUF4231 PF14015.6 ORF6971 - 0.7 10.4 5.2 1.9 9.0 5.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) End_tail_spike PF12219.8 ORF69647 - 0.011 15.8 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Catalytic domain of bacteriophage endosialidase Mod_r PF07200.13 ORF69619 - 0.0062 16.7 7.2 0.0062 16.7 7.2 1.6 1 1 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein HALZ PF02183.18 ORF69619 - 0.0089 16.2 15.3 0.026 14.8 1.6 3.5 1 1 2 3 3 3 2 Homeobox associated leucine zipper FapA PF03961.13 ORF69619 - 0.01 14.5 10.7 0.011 14.4 10.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Nmad5 PF18757.1 ORF69619 - 0.11 12.6 7.5 0.36 11.0 0.9 2.0 1 1 1 2 2 2 0 Nucleotide modification associated domain 5 Ax_dynein_light PF10211.9 ORF69619 - 0.19 11.7 12.0 0.25 11.3 11.5 1.5 1 1 0 1 1 1 0 Axonemal dynein light chain APG6_N PF17675.1 ORF69619 - 0.19 12.2 7.6 0.22 12.0 7.6 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF3450 PF11932.8 ORF69619 - 0.45 9.8 7.5 0.27 10.5 2.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) TMPIT PF07851.13 ORF69619 - 2.2 7.5 7.1 1.3 8.2 5.5 1.4 1 1 1 2 2 2 0 TMPIT-like protein bZIP_1 PF00170.21 ORF69619 - 2.9 8.1 14.1 1.8 8.7 2.5 2.7 1 1 1 2 2 2 0 bZIP transcription factor DivIC PF04977.15 ORF69619 - 3 7.7 15.1 1.4 8.7 1.6 2.7 1 1 2 3 3 3 0 Septum formation initiator DUF5320 PF17253.2 ORF69619 - 7.5 7.7 5.2 3.2 8.9 1.8 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5320) MotA_ExbB PF01618.16 ORF67960 - 2.3e-38 130.8 1.0 2.7e-38 130.6 1.0 1.1 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family Spin-Ssty PF02513.17 ORF67937 - 0.00023 20.8 0.2 0.00039 20.1 0.2 1.4 1 0 0 1 1 1 1 Spin/Ssty Family RR_TM4-6 PF06459.12 ORF65877 - 9.4 6.0 12.5 11 5.8 12.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF2715 PF10895.8 ORF65192 - 0.018 14.7 1.2 0.021 14.4 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) JUPITER PF17054.5 ORF65146 - 0.039 13.4 2.9 0.17 11.3 0.0 2.3 1 1 1 2 2 2 0 Microtubule-Associated protein Jupiter DZR PF12773.7 ORF64967 - 0.002 18.1 4.7 0.0038 17.2 4.7 1.5 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF64967 - 0.01 16.6 4.0 0.015 16.0 4.0 1.5 1 1 0 1 1 1 0 zinc-ribbon family zinc_ribbon_2 PF13240.6 ORF64967 - 0.031 14.0 3.1 4.1 7.2 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.19 ORF64967 - 0.29 11.2 4.7 0.39 10.7 4.7 1.4 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zip PF02535.22 ORF6430 - 6.2 5.9 11.1 6.3 5.9 11.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter TRP PF06011.12 ORF62992 - 1.8e-05 23.7 1.2 2e-05 23.5 1.2 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF565 PF04483.12 ORF62992 - 0.065 13.8 0.7 0.55 10.8 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF565) zf-RING_2 PF13639.6 ORF62956 - 5.4e-14 52.3 6.2 8.3e-14 51.7 6.2 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF62956 - 4.7e-11 42.2 4.4 4.7e-11 42.2 4.4 1.7 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF62956 - 9.9e-09 35.4 7.6 3e-08 33.8 7.6 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF62956 - 2e-08 33.9 6.0 3.7e-08 33.1 6.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF62956 - 6e-07 29.4 3.4 1.4e-06 28.2 0.9 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF62956 - 7.7e-07 28.9 3.4 1.1e-06 28.4 3.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF62956 - 1.2e-06 28.3 4.3 1.9e-06 27.7 4.3 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF62956 - 2.3e-06 27.4 7.2 4.2e-06 26.5 7.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF62956 - 9.4e-05 22.5 7.6 0.0052 16.9 7.6 2.2 1 1 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 ORF62956 - 0.00022 21.3 6.0 0.00037 20.6 6.0 1.4 1 0 0 1 1 1 1 RING-variant domain Prok-RING_4 PF14447.6 ORF62956 - 0.0003 20.6 5.9 0.00066 19.5 5.5 1.7 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF62956 - 0.00034 20.6 4.1 0.0014 18.6 4.1 2.0 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF62956 - 0.0029 17.2 2.3 0.0052 16.4 2.3 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Baculo_RING PF05883.11 ORF62956 - 0.0081 16.2 0.5 0.0092 16.0 0.5 1.2 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain Prok-RING_1 PF14446.6 ORF62956 - 0.01 15.8 4.6 0.15 12.0 1.1 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-RING_4 PF14570.6 ORF62956 - 0.012 15.4 4.7 0.019 14.7 4.7 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain C1_1 PF00130.22 ORF62956 - 0.017 15.0 1.5 0.38 10.7 0.2 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RVT PF13966.6 ORF62956 - 0.1 13.3 2.1 2.4 9.0 0.1 2.3 1 1 1 2 2 2 0 zinc-binding in reverse transcriptase Zf_RING PF16744.5 ORF62956 - 0.26 11.4 3.3 0.69 10.1 3.2 1.7 1 1 0 1 1 1 0 KIAA1045 RING finger zf-P11 PF03854.14 ORF62956 - 0.56 9.9 6.5 1.5 8.5 6.5 1.7 1 1 0 1 1 1 0 P-11 zinc finger zf-C3H2C3 PF17122.5 ORF62956 - 1.4 9.0 6.5 0.16 12.0 1.7 1.9 2 1 0 2 2 2 0 Zinc-finger DUF3377 PF11857.8 ORF61119 - 0.076 12.9 0.1 0.15 12.0 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) ArsC PF03960.15 ORF6000 - 1.5e-22 79.3 0.1 1.8e-22 79.1 0.1 1.1 1 0 0 1 1 1 1 ArsC family Glutaredoxin PF00462.24 ORF6000 - 6e-05 23.2 0.0 0.0084 16.3 0.0 2.1 2 0 0 2 2 2 2 Glutaredoxin kleA_kleC PF17383.2 ORF6000 - 0.1 13.0 0.2 0.14 12.5 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized KorC regulated protein A DUF732 PF05305.14 ORF59685 - 0.068 13.5 0.2 4.2 7.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF732) DUF1180 PF06679.12 ORF59346 - 1 9.8 3.7 1.2 9.5 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Herpes_UL52 PF03121.15 ORF58800 - 0.027 14.4 0.2 0.054 13.4 0.2 1.7 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase Ras PF00071.22 ORF5657 - 3.4e-39 134.0 0.1 3.8e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF5657 - 5.1e-32 110.6 0.1 6e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF5657 - 1.9e-11 43.7 0.0 2e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF5657 - 3.2e-08 33.6 0.0 3.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF5657 - 3.1e-05 23.5 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF5657 - 0.00016 21.3 0.1 0.023 14.2 0.0 2.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF5657 - 0.00099 18.6 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF5657 - 0.0014 18.9 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF5657 - 0.0021 18.5 0.0 0.0027 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 ORF5657 - 0.0023 17.7 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF5657 - 0.0028 17.4 0.2 0.004 16.9 0.2 1.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF5657 - 0.0028 17.6 0.1 0.0058 16.5 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF5657 - 0.0032 17.1 0.0 0.0035 16.9 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 ORF5657 - 0.0035 16.9 0.1 0.0044 16.5 0.1 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF5657 - 0.007 16.1 0.0 0.012 15.4 0.0 1.4 2 0 0 2 2 1 1 Sigma-54 interaction domain Septin PF00735.18 ORF5657 - 0.0091 15.3 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 1 Septin NACHT PF05729.12 ORF5657 - 0.0092 15.9 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 ORF5657 - 0.015 15.8 0.2 0.02 15.4 0.2 1.4 1 1 0 1 1 1 0 ABC transporter TniB PF05621.11 ORF5657 - 0.016 14.6 0.1 0.022 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RNA_helicase PF00910.22 ORF5657 - 0.076 13.4 0.1 0.11 12.9 0.1 1.4 1 1 0 1 1 1 0 RNA helicase DAP3 PF10236.9 ORF5657 - 0.082 12.1 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_14 PF13173.6 ORF5657 - 0.082 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain MCM PF00493.23 ORF5657 - 0.087 11.9 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_5 PF07728.14 ORF5657 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF5657 - 0.11 11.7 0.1 0.13 11.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF5657 - 0.11 12.3 0.1 0.25 11.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 ORF5657 - 0.12 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B Methyltransf_11 PF08241.12 ORF55426 - 1.4e-07 32.1 0.0 1.8e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF55426 - 0.00036 20.4 0.0 0.0004 20.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF55426 - 0.0017 19.0 0.0 0.0024 18.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF55426 - 0.026 15.2 0.0 0.032 15.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_29 PF03141.16 ORF55426 - 0.14 10.7 0.0 0.18 10.4 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Ras PF00071.22 ORF55064 - 3.4e-39 134.0 0.1 3.8e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF55064 - 5.1e-32 110.6 0.1 6e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF55064 - 1.9e-11 43.7 0.0 2e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF55064 - 3.2e-08 33.6 0.0 3.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF55064 - 3.1e-05 23.5 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF55064 - 0.00016 21.3 0.1 0.023 14.2 0.0 2.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF55064 - 0.00099 18.6 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF55064 - 0.0014 18.9 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF55064 - 0.0021 18.5 0.0 0.0027 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 ORF55064 - 0.0023 17.7 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF55064 - 0.0028 17.4 0.2 0.004 16.9 0.2 1.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF55064 - 0.0028 17.6 0.1 0.0058 16.5 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF55064 - 0.0032 17.1 0.0 0.0035 16.9 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 ORF55064 - 0.0035 16.9 0.1 0.0044 16.5 0.1 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF55064 - 0.007 16.1 0.0 0.012 15.4 0.0 1.4 2 0 0 2 2 1 1 Sigma-54 interaction domain Septin PF00735.18 ORF55064 - 0.0091 15.3 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 1 Septin NACHT PF05729.12 ORF55064 - 0.0092 15.9 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 ORF55064 - 0.015 15.8 0.2 0.02 15.4 0.2 1.4 1 1 0 1 1 1 0 ABC transporter TniB PF05621.11 ORF55064 - 0.016 14.6 0.1 0.022 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RNA_helicase PF00910.22 ORF55064 - 0.076 13.4 0.1 0.11 12.9 0.1 1.4 1 1 0 1 1 1 0 RNA helicase DAP3 PF10236.9 ORF55064 - 0.082 12.1 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_14 PF13173.6 ORF55064 - 0.082 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain MCM PF00493.23 ORF55064 - 0.087 11.9 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_5 PF07728.14 ORF55064 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF55064 - 0.11 11.7 0.1 0.13 11.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF55064 - 0.11 12.3 0.1 0.25 11.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 ORF55064 - 0.12 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B DUF2418 PF10332.9 ORF54116 - 0.75 10.4 6.3 0.16 12.5 2.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2418) DUF2715 PF10895.8 ORF54084 - 0.018 14.7 1.2 0.021 14.4 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) LRR_3 PF07725.12 ORF53292 - 7.6 6.6 12.6 4 7.4 0.4 3.4 3 1 1 4 4 4 0 Leucine Rich Repeat 2OG-FeII_Oxy_3 PF13640.6 ORF5320 - 6.2e-07 30.2 0.0 8.7e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-Fe_Oxy_2 PF10014.9 ORF5320 - 0.00022 21.1 0.0 0.00025 20.9 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe dioxygenase 2OG-FeII_Oxy_2 PF13532.6 ORF5320 - 0.08 13.1 0.0 0.094 12.9 0.0 1.2 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily SARS_lipid_bind PF09399.10 ORF52924 - 0.073 13.3 0.1 0.94 9.7 0.0 2.0 1 1 0 2 2 2 0 SARS lipid binding protein Ras PF00071.22 ORF52550 - 3.4e-39 134.0 0.1 3.8e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF52550 - 5.1e-32 110.6 0.1 6e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF52550 - 1.9e-11 43.7 0.0 2e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF52550 - 3.2e-08 33.6 0.0 3.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF52550 - 3.1e-05 23.5 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF52550 - 0.00016 21.3 0.1 0.023 14.2 0.0 2.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF52550 - 0.00099 18.6 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF52550 - 0.0014 18.9 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF52550 - 0.0021 18.5 0.0 0.0027 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 ORF52550 - 0.0023 17.7 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF52550 - 0.0028 17.4 0.2 0.004 16.9 0.2 1.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF52550 - 0.0028 17.6 0.1 0.0058 16.5 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF52550 - 0.0032 17.1 0.0 0.0035 16.9 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 ORF52550 - 0.0035 16.9 0.1 0.0044 16.5 0.1 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF52550 - 0.007 16.1 0.0 0.012 15.4 0.0 1.4 2 0 0 2 2 1 1 Sigma-54 interaction domain Septin PF00735.18 ORF52550 - 0.0091 15.3 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 1 Septin NACHT PF05729.12 ORF52550 - 0.0092 15.9 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 ORF52550 - 0.015 15.8 0.2 0.02 15.4 0.2 1.4 1 1 0 1 1 1 0 ABC transporter TniB PF05621.11 ORF52550 - 0.016 14.6 0.1 0.022 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RNA_helicase PF00910.22 ORF52550 - 0.076 13.4 0.1 0.11 12.9 0.1 1.4 1 1 0 1 1 1 0 RNA helicase DAP3 PF10236.9 ORF52550 - 0.082 12.1 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_14 PF13173.6 ORF52550 - 0.082 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain MCM PF00493.23 ORF52550 - 0.087 11.9 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_5 PF07728.14 ORF52550 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF52550 - 0.11 11.7 0.1 0.13 11.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF52550 - 0.11 12.3 0.1 0.25 11.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 ORF52550 - 0.12 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B Ras PF00071.22 ORF5246 - 3.4e-39 134.0 0.1 3.8e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF5246 - 5.1e-32 110.6 0.1 6e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF5246 - 1.9e-11 43.7 0.0 2e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF5246 - 3.2e-08 33.6 0.0 3.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF5246 - 3.1e-05 23.5 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF5246 - 0.00016 21.3 0.1 0.023 14.2 0.0 2.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF5246 - 0.00099 18.6 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF5246 - 0.0014 18.9 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF5246 - 0.0021 18.5 0.0 0.0027 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 ORF5246 - 0.0023 17.7 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF5246 - 0.0028 17.4 0.2 0.004 16.9 0.2 1.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF5246 - 0.0028 17.6 0.1 0.0058 16.5 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF5246 - 0.0032 17.1 0.0 0.0035 16.9 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 ORF5246 - 0.0035 16.9 0.1 0.0044 16.5 0.1 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF5246 - 0.007 16.1 0.0 0.012 15.4 0.0 1.4 2 0 0 2 2 1 1 Sigma-54 interaction domain Septin PF00735.18 ORF5246 - 0.0091 15.3 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 1 Septin NACHT PF05729.12 ORF5246 - 0.0092 15.9 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 ORF5246 - 0.015 15.8 0.2 0.02 15.4 0.2 1.4 1 1 0 1 1 1 0 ABC transporter TniB PF05621.11 ORF5246 - 0.016 14.6 0.1 0.022 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RNA_helicase PF00910.22 ORF5246 - 0.076 13.4 0.1 0.11 12.9 0.1 1.4 1 1 0 1 1 1 0 RNA helicase DAP3 PF10236.9 ORF5246 - 0.082 12.1 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_14 PF13173.6 ORF5246 - 0.082 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain MCM PF00493.23 ORF5246 - 0.087 11.9 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_5 PF07728.14 ORF5246 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF5246 - 0.11 11.7 0.1 0.13 11.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF5246 - 0.11 12.3 0.1 0.25 11.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 ORF5246 - 0.12 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B GrpE PF01025.19 ORF52315 - 0.028 14.1 1.5 0.037 13.7 1.5 1.2 1 0 0 1 1 1 0 GrpE Rrn6 PF10214.9 ORF5227 - 0.97 7.8 9.3 1.1 7.6 9.3 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DSPc PF00782.20 ORF51909 - 1.9e-21 76.3 0.0 2.2e-21 76.0 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF51909 - 0.00066 19.3 0.1 0.00089 18.9 0.1 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase SBF2 PF12335.8 ORF51909 - 0.023 14.3 0.0 0.025 14.2 0.0 1.1 1 0 0 1 1 1 0 Myotubularin protein Baculo_IE-1 PF05290.11 ORF49143 - 0.016 15.1 0.2 0.029 14.3 0.2 1.4 1 1 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) End_tail_spike PF12219.8 ORF47688 - 0.011 15.8 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Catalytic domain of bacteriophage endosialidase MORN PF02493.20 ORF47266 - 2.5e-09 36.5 11.4 4.2e-05 23.2 1.8 3.2 3 0 0 3 3 3 2 MORN repeat DUF1323 PF07037.11 ORF46642 - 2.1e-49 167.0 0.0 2.7e-49 166.6 0.0 1.1 1 0 0 1 1 1 1 Putative transcription regulator (DUF1323) HTH_29 PF13551.6 ORF46642 - 0.00031 20.7 0.0 0.00059 19.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix HTH_3 PF01381.22 ORF46642 - 0.00037 20.5 0.0 0.00069 19.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_17 PF12728.7 ORF46642 - 0.0005 20.2 0.1 0.00097 19.3 0.1 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF46642 - 0.0009 19.0 0.0 0.0025 17.6 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 ORF46642 - 0.0014 18.7 0.3 0.0059 16.7 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Tnp_Mu_1 PF02316.16 ORF46642 - 0.002 18.3 0.5 0.005 17.0 0.5 1.7 1 1 0 1 1 1 1 Mu DNA-binding domain DUF4224 PF13986.6 ORF46642 - 0.0047 16.8 0.1 0.011 15.6 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4224) HTH_26 PF13443.6 ORF46642 - 0.0074 16.7 0.0 0.012 16.1 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 ORF46642 - 0.0088 16.4 0.0 0.013 15.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Terminase_5 PF06056.12 ORF46642 - 0.012 15.4 0.0 0.024 14.5 0.0 1.5 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_24 PF13412.6 ORF46642 - 0.016 14.7 0.1 0.039 13.5 0.0 1.8 2 0 0 2 2 1 0 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 ORF46642 - 0.018 14.8 0.0 0.033 14.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain CSN8_PSD8_EIF3K PF10075.9 ORF46642 - 0.021 14.8 0.0 0.034 14.1 0.0 1.2 1 0 0 1 1 1 0 CSN8/PSMD8/EIF3K family YdaS_antitoxin PF15943.5 ORF46642 - 0.038 13.8 0.0 0.067 13.1 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_Crp_2 PF13545.6 ORF46642 - 0.053 13.5 0.0 0.22 11.5 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 ORF46642 - 0.19 11.9 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase DUF1971 PF09313.11 ORF46520 - 0.041 13.9 0.1 0.06 13.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1971) DegQ PF08181.11 ORF46520 - 0.047 13.8 0.4 0.047 13.8 0.4 2.3 2 1 0 2 2 2 0 DegQ (SacQ) family SPT6_acidic PF14632.6 ORF46520 - 0.72 10.5 10.8 3.4 8.3 4.4 2.1 2 0 0 2 2 2 0 Acidic N-terminal SPT6 RIH_assoc PF08454.11 ORF46176 - 1.9e-11 43.7 1.7 3.1e-11 43.0 1.7 1.4 1 0 0 1 1 1 1 RyR and IP3R Homology associated WW PF00397.26 ORF46176 - 0.035 14.2 0.1 0.074 13.1 0.1 1.5 1 0 0 1 1 1 0 WW domain DDT PF02791.17 ORF46176 - 0.056 13.8 0.2 0.12 12.8 0.1 1.5 2 0 0 2 2 2 0 DDT domain AI-2E_transport PF01594.16 ORF4585 - 0.22 10.7 0.1 0.27 10.3 0.1 1.1 1 0 0 1 1 1 0 AI-2E family transporter Peptidase_C58 PF03543.14 ORF45418 - 0.014 15.1 0.0 0.025 14.3 0.0 1.4 1 1 0 1 1 1 0 Yersinia/Haemophilus virulence surface antigen AMH_N PF04709.12 ORF45418 - 0.07 12.0 0.1 0.098 11.5 0.1 1.1 1 0 0 1 1 1 0 Anti-Mullerian hormone, N terminal region SAP30_Sin3_bdg PF13867.6 ORF44895 - 3.6e-10 40.0 0.1 3.6e-10 40.0 0.1 2.1 3 0 0 3 3 3 1 Sin3 binding region of histone deacetylase complex subunit SAP30 RhoGEF67_u2 PF16614.5 ORF44895 - 0.11 12.6 0.8 0.14 12.2 0.8 1.3 1 0 0 1 1 1 0 Unstructured region two on RhoGEF 6 and 7 Enolase_C PF00113.22 ORF44076 - 0.037 13.3 2.2 0.041 13.1 2.2 1.1 1 0 0 1 1 1 0 Enolase, C-terminal TIM barrel domain Methyltransf_12 PF08242.12 ORF44076 - 0.13 13.0 0.1 0.19 12.5 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase domain WavE PF07507.11 ORF43805 - 0.047 12.9 0.6 0.052 12.7 0.6 1.0 1 0 0 1 1 1 0 WavE lipopolysaccharide synthesis IL2RB_N1 PF18707.1 ORF42878 - 0.016 15.7 3.0 0.021 15.4 3.0 1.2 1 0 0 1 1 1 0 Interleukin-2 receptor subunit beta N-terminal domain 1 DUF29 PF01724.16 ORF42878 - 0.091 13.0 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF29 DUF4535 PF15054.6 ORF41592 - 0.19 11.5 0.2 2.9 7.7 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) HARP PF07443.13 ORF41184 - 0.083 12.5 0.0 0.23 11.1 0.0 1.7 1 0 0 1 1 1 0 HepA-related protein (HARP) AMMECR1 PF01871.17 ORF4106 - 1.6e-24 86.4 0.0 1.9e-24 86.2 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 WD40 PF00400.32 ORF39789 - 0.015 16.2 0.1 0.2 12.6 0.0 2.5 3 0 0 3 3 3 0 WD domain, G-beta repeat PI3_PI4_kinase PF00454.27 ORF39322 - 2.1e-15 57.2 0.1 2.4e-15 57.1 0.1 1.1 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase UPF0225 PF17775.1 ORF39128 - 6.5e-28 97.5 0.0 7.4e-28 97.3 0.0 1.0 1 0 0 1 1 1 1 UPF0225 domain SEC-C PF02810.15 ORF39128 - 2.3e-11 43.4 11.5 4.5e-11 42.5 11.5 1.5 1 0 0 1 1 1 1 SEC-C motif CW_binding_1 PF01473.20 ORF39128 - 0.0032 17.7 0.4 0.007 16.6 0.4 1.6 1 0 0 1 1 1 1 Putative cell wall binding repeat Ras PF00071.22 ORF38783 - 3.4e-39 134.0 0.1 3.8e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF38783 - 5.1e-32 110.6 0.1 6e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF38783 - 1.9e-11 43.7 0.0 2e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF38783 - 3.2e-08 33.6 0.0 3.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF38783 - 3.1e-05 23.5 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF38783 - 0.00016 21.3 0.1 0.023 14.2 0.0 2.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF38783 - 0.00099 18.6 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF38783 - 0.0014 18.9 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF38783 - 0.0021 18.5 0.0 0.0027 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 ORF38783 - 0.0023 17.7 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF38783 - 0.0028 17.4 0.2 0.004 16.9 0.2 1.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF38783 - 0.0028 17.6 0.1 0.0058 16.5 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF38783 - 0.0032 17.1 0.0 0.0035 16.9 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 ORF38783 - 0.0035 16.9 0.1 0.0044 16.5 0.1 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF38783 - 0.007 16.1 0.0 0.012 15.4 0.0 1.4 2 0 0 2 2 1 1 Sigma-54 interaction domain Septin PF00735.18 ORF38783 - 0.0091 15.3 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 1 Septin NACHT PF05729.12 ORF38783 - 0.0092 15.9 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 ORF38783 - 0.015 15.8 0.2 0.02 15.4 0.2 1.4 1 1 0 1 1 1 0 ABC transporter TniB PF05621.11 ORF38783 - 0.016 14.6 0.1 0.022 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RNA_helicase PF00910.22 ORF38783 - 0.076 13.4 0.1 0.11 12.9 0.1 1.4 1 1 0 1 1 1 0 RNA helicase DAP3 PF10236.9 ORF38783 - 0.082 12.1 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_14 PF13173.6 ORF38783 - 0.082 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain MCM PF00493.23 ORF38783 - 0.087 11.9 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_5 PF07728.14 ORF38783 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF38783 - 0.11 11.7 0.1 0.13 11.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF38783 - 0.11 12.3 0.1 0.25 11.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 ORF38783 - 0.12 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B DUF2312 PF10073.9 ORF37014 - 0.032 13.9 5.3 0.047 13.3 3.5 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) MatP PF06303.12 ORF36856 - 0.44 11.1 7.3 0.29 11.7 2.9 2.4 1 1 2 3 3 3 0 MatP N-terminal domain PCRF PF03462.18 ORF36856 - 0.68 9.8 10.4 0.9 9.4 10.4 1.2 1 0 0 1 1 1 0 PCRF domain DUF2205 PF10224.9 ORF36856 - 4.7 7.3 13.3 3.5 7.7 0.6 3.2 2 1 1 3 3 3 0 Short coiled-coil protein Sugar_tr PF00083.24 ORF36018 - 5.2e-10 38.8 17.1 5.7e-10 38.6 17.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF36018 - 0.0017 17.4 14.7 0.0019 17.2 14.3 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily Herpes_LMP1 PF05297.11 ORF36018 - 1.1 8.4 9.4 1.3 8.2 9.4 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) LRR_3 PF07725.12 ORF35982 - 7.6 6.6 12.6 4 7.4 0.4 3.4 3 1 1 4 4 4 0 Leucine Rich Repeat Thioredoxin_8 PF13905.6 ORF34840 - 3.6e-06 27.2 0.1 1.4e-05 25.3 0.0 1.9 2 1 0 2 2 2 1 Thioredoxin-like Atrophin-1 PF03154.15 ORF34840 - 9.9 4.3 7.8 12 4.0 7.8 1.0 1 0 0 1 1 1 0 Atrophin-1 family DrsE PF02635.15 ORF34569 - 4.3e-24 85.1 0.0 4.8e-24 85.0 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family Ribosomal_L5 PF00281.19 ORF34569 - 0.07 13.5 0.0 0.098 13.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L5 MIG-14_Wnt-bd PF06664.12 ORF31286 - 0.13 11.4 10.5 0.22 10.7 10.5 1.5 1 1 0 1 1 1 0 Wnt-binding factor required for Wnt secretion Oxidored_q3 PF00499.20 ORF31286 - 0.25 11.1 8.6 0.041 13.6 3.6 1.9 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Fig1 PF12351.8 ORF31286 - 9.3 6.1 10.5 4.3 7.2 4.8 2.0 1 1 1 2 2 2 0 Ca2+ regulator and membrane fusion protein Fig1 AvrM-A PF18241.1 ORF31161 - 0.018 15.5 0.4 0.021 15.2 0.4 1.1 1 0 0 1 1 1 0 Flax-rust effector AvrM-A ART PF01129.18 ORF31140 - 1e-07 31.5 0.0 1.2e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 ORF31140 - 0.00045 19.6 0.0 0.00053 19.4 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosyltransferase exoenzyme Pentapeptide PF00805.22 ORF30938 - 0.0094 15.6 0.0 0.039 13.6 0.0 1.9 1 1 1 2 2 2 1 Pentapeptide repeats (8 copies) Alpha-amyl_C PF09071.10 ORF30938 - 0.08 12.8 0.1 0.08 12.8 0.1 2.5 2 1 1 3 3 3 0 Alpha-amylase, C terminal Pentapeptide_3 PF13576.6 ORF30938 - 0.11 12.6 0.7 0.11 12.6 0.7 2.2 3 0 0 3 3 3 0 Pentapeptide repeats (9 copies) DUF4441 PF14536.6 ORF306 - 0.44 10.7 9.0 0.098 12.9 2.8 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4441) Ycf4 PF02392.16 ORF30493 - 0.078 12.5 0.3 0.088 12.4 0.3 1.1 1 0 0 1 1 1 0 Ycf4 DNA_pol_lambd_f PF10391.9 ORF30032 - 0.22 11.4 0.1 0.34 10.8 0.1 1.3 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda WD40 PF00400.32 ORF29366 - 0.015 16.2 0.1 0.2 12.6 0.0 2.5 3 0 0 3 3 3 0 WD domain, G-beta repeat RHIM PF12721.7 ORF29076 - 2.2 8.8 4.7 4.9 7.7 0.5 2.4 2 0 0 2 2 2 0 RIP homotypic interaction motif MORN PF02493.20 ORF28706 - 2.5e-09 36.5 11.4 4.2e-05 23.2 1.8 3.2 3 0 0 3 3 3 2 MORN repeat SDH_sah PF01972.16 ORF28179 - 0.005 15.9 1.5 0.0056 15.7 1.5 1.1 1 0 0 1 1 1 1 Serine dehydrogenase proteinase ArfGap PF01412.18 ORF28179 - 1.8 8.6 5.2 1.7 8.7 1.4 2.0 1 1 0 2 2 2 0 Putative GTPase activating protein for Arf HlyIII PF03006.20 ORF2768 - 4.2e-06 26.6 0.4 5.1e-06 26.4 0.4 1.1 1 0 0 1 1 1 1 Haemolysin-III related Ycf4 PF02392.16 ORF27579 - 0.078 12.5 0.3 0.088 12.4 0.3 1.1 1 0 0 1 1 1 0 Ycf4 Complex1_30kDa PF00329.19 ORF27381 - 2.6e-10 41.0 0.0 3e-10 40.8 0.0 1.0 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DUF629 PF04780.12 ORF26925 - 7.1 5.0 8.7 9.1 4.7 8.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF629) MORN PF02493.20 ORF26813 - 2.5e-09 36.5 11.4 4.2e-05 23.2 1.8 3.2 3 0 0 3 3 3 2 MORN repeat zf_CCCH_4 PF18345.1 ORF24408 - 1.5e-08 34.4 20.2 9.6e-05 22.3 3.5 2.3 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF24408 - 1.1e-07 31.5 17.9 4.6e-05 23.2 7.8 2.4 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Torus PF16131.5 ORF24408 - 7.7e-07 29.8 10.0 0.00058 20.5 2.0 2.2 1 1 1 2 2 2 2 Torus domain zf-CCCH_4 PF18044.1 ORF24408 - 0.00027 20.6 18.5 0.0006 19.5 4.1 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF24408 - 0.027 14.7 10.0 0.11 12.7 10.0 1.8 1 1 0 1 1 1 0 Zinc-finger containing family zf-CCCH_2 PF14608.6 ORF24408 - 0.35 11.4 11.2 5.1 7.7 0.2 2.6 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Hydrolase_6 PF13344.6 ORF23604 - 0.044 13.9 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase RNase_T PF00929.24 ORF23604 - 0.071 13.6 0.1 0.91 10.0 0.0 1.8 1 1 1 2 2 2 0 Exonuclease UPF0176_N PF17773.1 ORF23604 - 0.13 12.7 0.1 0.33 11.3 0.1 1.9 1 1 0 1 1 1 0 UPF0176 acylphosphatase like domain P66_CC PF16563.5 ORF23604 - 0.15 11.7 1.1 0.26 10.9 1.1 1.4 1 0 0 1 1 1 0 Coiled-coil and interaction region of P66A and P66B with MBD2 TFIIA_gamma_N PF02268.16 ORF23547 - 0.19 11.8 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit, helical domain ubiquitin PF00240.23 ORF23079 - 8.3e-06 25.5 0.3 1.3e-05 24.8 0.3 1.3 1 0 0 1 1 1 1 Ubiquitin family DUF4028 PF13220.6 ORF23079 - 0.12 12.1 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) MORN PF02493.20 ORF22944 - 4.7e-12 45.0 19.2 4.2e-06 26.3 0.7 5.4 6 0 0 6 6 6 3 MORN repeat TAP42 PF04177.12 ORF22329 - 0.21 10.7 0.1 0.25 10.4 0.1 1.1 1 0 0 1 1 1 0 TAP42-like family dsDNA_bind PF01984.20 ORF2099 - 4e-22 78.6 12.6 4.3e-22 78.5 12.6 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain TMPIT PF07851.13 ORF2099 - 0.14 11.4 1.5 0.19 10.9 1.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein KIP1 PF07765.12 ORF2099 - 1.1 9.4 7.9 1.4 9.1 3.5 2.2 1 1 1 2 2 2 0 KIP1-like protein AP_endonuc_2 PF01261.24 ORF20582 - 4e-10 39.5 0.0 4.4e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Herpes_UL25 PF01499.16 ORF19432 - 0.0003 19.4 0.0 0.00031 19.4 0.0 1.0 1 0 0 1 1 1 1 Herpesvirus UL25 family T6SS_VasJ PF16989.5 ORF17380 - 0.14 11.6 0.1 0.17 11.3 0.1 1.1 1 0 0 1 1 1 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ sCache_3_2 PF17203.4 ORF1707 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Single cache domain 3 UPF0506 PF11703.8 ORF16194 - 1.4 9.4 24.9 0.35 11.3 7.7 3.2 2 1 1 3 3 3 0 UPF0506 CEBP_ZZ PF16366.5 ORF15298 - 0.044 14.0 0.9 0.044 14.0 0.9 1.6 2 0 0 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain STT3_PglB_C PF18527.1 ORF14907 - 0.59 10.3 6.4 1.1 9.4 5.0 2.0 1 1 1 2 2 2 0 STT3/PglB C-terminal beta-barrel domain SARS_lipid_bind PF09399.10 ORF14135 - 0.073 13.3 0.1 0.94 9.7 0.0 2.0 1 1 0 2 2 2 0 SARS lipid binding protein Proteasome PF00227.26 ORF1359 - 6.1e-10 38.9 0.0 6.9e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit DUF3774 PF12609.8 ORF13548 - 0.95 10.5 5.8 3.4 8.8 0.7 2.1 2 0 0 2 2 2 0 Wound-induced protein Ras PF00071.22 ORF1352 - 3.4e-39 134.0 0.1 3.8e-39 133.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF1352 - 5.1e-32 110.6 0.1 6e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF1352 - 1.9e-11 43.7 0.0 2e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF1352 - 3.2e-08 33.6 0.0 3.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF1352 - 3.1e-05 23.5 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF1352 - 0.00016 21.3 0.1 0.023 14.2 0.0 2.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF1352 - 0.00099 18.6 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF1352 - 0.0014 18.9 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF1352 - 0.0021 18.5 0.0 0.0027 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 ORF1352 - 0.0023 17.7 0.0 0.0026 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF1352 - 0.0028 17.4 0.2 0.004 16.9 0.2 1.4 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF1352 - 0.0028 17.6 0.1 0.0058 16.5 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF1352 - 0.0032 17.1 0.0 0.0035 16.9 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 ORF1352 - 0.0035 16.9 0.1 0.0044 16.5 0.1 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF1352 - 0.007 16.1 0.0 0.012 15.4 0.0 1.4 2 0 0 2 2 1 1 Sigma-54 interaction domain Septin PF00735.18 ORF1352 - 0.0091 15.3 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 1 Septin NACHT PF05729.12 ORF1352 - 0.0092 15.9 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 ORF1352 - 0.015 15.8 0.2 0.02 15.4 0.2 1.4 1 1 0 1 1 1 0 ABC transporter TniB PF05621.11 ORF1352 - 0.016 14.6 0.1 0.022 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RNA_helicase PF00910.22 ORF1352 - 0.076 13.4 0.1 0.11 12.9 0.1 1.4 1 1 0 1 1 1 0 RNA helicase DAP3 PF10236.9 ORF1352 - 0.082 12.1 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_14 PF13173.6 ORF1352 - 0.082 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain MCM PF00493.23 ORF1352 - 0.087 11.9 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_5 PF07728.14 ORF1352 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF1352 - 0.11 11.7 0.1 0.13 11.4 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF1352 - 0.11 12.3 0.1 0.25 11.1 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 ORF1352 - 0.12 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B MFS_1 PF07690.16 ORF13492 - 3.3e-07 29.6 14.1 3.6e-07 29.5 14.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF13492 - 0.1 11.4 8.9 0.12 11.2 8.9 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter LRR_3 PF07725.12 ORF13406 - 7.6 6.6 12.6 4 7.4 0.4 3.4 3 1 1 4 4 4 0 Leucine Rich Repeat TPX2_importin PF12214.8 ORF13268 - 0.027 14.7 1.7 0.037 14.2 1.7 1.4 1 1 0 1 1 1 0 Cell cycle regulated microtubule associated protein Pep1_7 PF17232.2 ORF13268 - 0.041 14.3 0.1 0.058 13.9 0.1 1.4 1 1 0 1 1 1 0 Elicitor peptide 1-7 DUF629 PF04780.12 ORF13139 - 7.1 5.0 8.7 9.1 4.7 8.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF629) Herpes_UL20 PF04544.12 ORF1242 - 0.056 13.8 4.6 0.086 13.2 4.6 1.4 1 1 0 1 1 1 0 Herpesvirus egress protein UL20 DUF629 PF04780.12 ORF112453 - 7.1 5.0 8.7 9.1 4.7 8.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF629) Tmemb_9 PF05434.11 ORF111450 - 0.00024 21.0 0.8 0.00029 20.7 0.8 1.1 1 0 0 1 1 1 1 TMEM9 DUF4834 PF16118.5 ORF111450 - 0.019 15.9 0.1 0.031 15.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4441 PF14536.6 ORF111374 - 0.44 10.7 9.0 0.098 12.9 2.8 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4441) MFS_1 PF07690.16 ORF110839 - 0.00046 19.2 0.8 0.00049 19.1 0.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1576 PF07613.11 ORF110839 - 0.012 15.2 0.4 0.014 14.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1576) DUF347 PF03988.12 ORF110839 - 3.1 8.1 8.2 2.3 8.5 2.5 2.2 1 1 1 2 2 2 0 Repeat of Unknown Function (DUF347) Mito_carr PF00153.27 ORF110674 - 1.7e-08 34.3 1.2 6.3e-05 22.8 0.0 2.2 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF1180 PF06679.12 ORF110197 - 1 9.8 3.7 1.2 9.5 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Gag_MA PF01140.19 ORF109515 - 0.1 12.3 0.0 0.23 11.2 0.0 1.5 1 1 0 1 1 1 0 Matrix protein (MA), p15 DUF1778 PF08681.11 ORF109162 - 4.5e-19 68.2 2.6 5.9e-19 67.8 2.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1778) Med5 PF08689.10 ORF109162 - 0.044 11.6 0.0 0.044 11.6 0.0 1.1 1 0 0 1 1 1 0 Mediator complex subunit Med5 Condensation PF00668.20 ORF109162 - 0.056 12.1 0.2 0.11 11.1 0.1 1.5 1 1 1 2 2 2 0 Condensation domain HXXEE PF13787.6 ORF108579 - 0.64 10.9 5.6 0.84 10.5 5.6 1.3 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif MAP17 PF15807.5 ORF108579 - 5.2 7.3 5.5 19 5.5 5.4 1.8 1 1 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 CTP_transf_like PF01467.26 ORF108469 - 2.3e-12 47.3 0.0 3.2e-12 46.9 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 ORF108469 - 0.0052 16.7 0.1 0.0072 16.2 0.1 1.2 1 0 0 1 1 1 1 FAD synthetase HIGH_NTase1 PF05636.11 ORF108469 - 0.012 14.8 0.2 0.018 14.3 0.2 1.2 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase ROK PF00480.20 ORF107484 - 2.4e-16 60.1 0.0 2.7e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 ROK family HTH_25 PF13413.6 ORF107484 - 0.11 12.4 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain ParD_like PF11903.8 ORF106216 - 0.24 11.5 1.5 0.9 9.7 0.1 2.1 1 1 1 2 2 2 0 ParD-like antitoxin of type II bacterial toxin-antitoxin system zf-RING_2 PF13639.6 ORF106017 - 2.4e-11 43.8 5.6 3.3e-11 43.3 5.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF106017 - 7.8e-11 41.5 3.7 1.5e-10 40.7 3.7 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF106017 - 9.8e-08 31.7 4.9 1.4e-07 31.2 4.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF106017 - 1.4e-07 31.3 5.2 2.1e-07 30.7 5.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF106017 - 2.6e-07 30.6 4.0 4.2e-07 29.9 4.0 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF106017 - 3.4e-05 23.7 4.7 5.7e-05 23.0 4.7 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF106017 - 4.7e-05 22.9 3.0 7.6e-05 22.3 3.0 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF106017 - 5.6e-05 23.1 2.1 9.8e-05 22.3 2.1 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 ORF106017 - 0.00016 21.9 7.8 0.00091 19.5 7.8 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_6 PF14835.6 ORF106017 - 0.00083 19.2 0.8 0.0012 18.6 0.8 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-C3HC4_3 PF13920.6 ORF106017 - 0.0027 17.5 3.5 0.0042 16.9 3.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF106017 - 0.0031 17.3 6.5 0.0072 16.2 6.5 1.6 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF106017 - 0.0038 17.4 3.7 0.009 16.1 3.7 1.6 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_1 PF14446.6 ORF106017 - 0.0049 16.8 1.8 0.061 13.3 0.3 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-HC5HC2H_2 PF13832.6 ORF106017 - 0.011 15.9 0.5 0.011 15.9 0.5 1.8 1 1 0 2 2 2 0 PHD-zinc-finger like domain zf-Nse PF11789.8 ORF106017 - 0.025 14.4 3.5 0.038 13.8 3.5 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-UDP PF14569.6 ORF106017 - 0.031 14.4 1.2 0.047 13.8 1.2 1.3 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-RING-like PF08746.11 ORF106017 - 0.15 12.4 5.3 0.3 11.4 5.3 1.6 1 1 0 1 1 1 0 RING-like domain FANCL_C PF11793.8 ORF106017 - 0.27 11.5 4.5 2.8 8.2 4.5 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3H2C3 PF17122.5 ORF106017 - 3.9 7.6 8.1 35 4.5 8.1 2.2 1 1 0 1 1 1 0 Zinc-finger CIDE-N PF02017.15 ORF105683 - 0.045 13.8 0.7 0.081 13.0 0.7 1.4 1 0 0 1 1 1 0 CIDE-N domain Carboxyl_trans PF01039.22 ORF10561 - 0.2 10.2 0.1 0.22 10.1 0.1 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain peroxidase PF00141.23 ORF105471 - 2.2e-23 83.2 0.2 2.4e-23 83.0 0.2 1.0 1 0 0 1 1 1 1 Peroxidase CW_binding_2 PF04122.12 ORF105471 - 0.071 13.8 0.1 0.09 13.4 0.1 1.2 1 0 0 1 1 1 0 Putative cell wall binding repeat 2 LysM PF01476.20 ORF105388 - 3e-06 27.2 0.0 4.6e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 LysM domain WD40 PF00400.32 ORF105125 - 0.015 16.2 0.1 0.2 12.6 0.0 2.5 3 0 0 3 3 3 0 WD domain, G-beta repeat PH PF00169.29 ORF105003 - 3e-17 63.0 0.3 3.4e-17 62.8 0.3 1.0 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF105003 - 0.00079 19.8 1.1 0.007 16.8 1.1 2.0 1 1 0 1 1 1 1 Pleckstrin homology domain PH_3 PF14593.6 ORF105003 - 0.001 19.2 0.1 0.0022 18.0 0.1 1.5 1 1 0 1 1 1 1 PH domain PH_13 PF16652.5 ORF105003 - 0.0012 18.7 0.0 0.0014 18.5 0.0 1.1 1 0 0 1 1 1 1 Pleckstrin homology domain PH_4 PF15404.6 ORF105003 - 0.0057 16.5 0.2 2.8 7.7 0.0 2.2 1 1 1 2 2 2 2 Pleckstrin homology domain PH_9 PF15410.6 ORF105003 - 0.0065 16.8 0.1 0.023 15.1 0.1 1.7 1 1 0 1 1 1 1 Pleckstrin homology domain UBA_4 PF14555.6 ORF104750 - 0.0015 18.3 0.2 0.0022 17.8 0.2 1.3 1 0 0 1 1 1 1 UBA-like domain TF_AP-2 PF03299.14 ORF104251 - 0.0088 16.0 0.0 0.01 15.8 0.0 1.0 1 0 0 1 1 1 1 Transcription factor AP-2 AI-2E_transport PF01594.16 ORF102626 - 0.22 10.7 0.1 0.27 10.3 0.1 1.1 1 0 0 1 1 1 0 AI-2E family transporter WCOR413 PF05562.11 ORF101815 - 0.38 10.7 2.8 0.69 9.8 2.8 1.5 1 1 0 1 1 1 0 Cold acclimation protein WCOR413 KIAA1430 PF13879.6 ORF101555 - 6.8e-14 52.5 1.8 9.1e-14 52.1 1.8 1.2 1 0 0 1 1 1 1 KIAA1430 homologue DUF2500 PF10694.9 ORF100362 - 1.5e-31 109.1 0.1 1.7e-31 109.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2500) RNA_pol_Rpb1_R PF05001.13 NODE_51486_length_352_cov_1.741325_g43574_i0forward_frame_1 - 0.41 11.1 7.9 0.34 11.4 5.9 1.9 2 0 0 2 2 2 0 RNA polymerase Rpb1 C-terminal repeat Utp21 PF04192.12 NODE_51480_length_352_cov_1.952681_g43568_i0reverse_frame_1 - 0.066 12.7 0.0 0.095 12.2 0.0 1.2 1 0 0 1 1 1 0 Utp21 specific WD40 associated putative domain MTABC_N PF16185.5 NODE_51478_length_352_cov_2.015773_g43566_i0forward_frame_1 - 0.37 10.3 4.0 0.42 10.1 4.0 1.1 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region DUF3784 PF12650.7 NODE_51475_length_352_cov_2.031546_g43563_i0forward_frame_1 - 0.039 14.2 0.4 0.073 13.3 0.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3784) COXG PF06240.13 NODE_51469_length_352_cov_2.514196_g43557_i0reverse_frame_1 - 0.037 13.8 0.0 0.067 12.9 0.0 1.4 1 1 0 1 1 1 0 Carbon monoxide dehydrogenase subunit G (CoxG) DUF1919 PF08942.10 NODE_51468_length_352_cov_2.526814_g43556_i0forward_frame_1 - 0.033 13.7 1.8 0.038 13.5 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1919) DUF3883 PF13020.6 NODE_51466_length_352_cov_2.772871_g43554_i0forward_frame_1 - 0.12 12.5 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3883) MORN PF02493.20 NODE_51464_length_352_cov_2.835962_g43552_i0forward_frame_1 - 4.8e-13 48.2 10.2 6.5e-07 28.9 0.7 2.3 2 0 0 2 2 2 2 MORN repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks196.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks196.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks196.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks196.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DivIC PF04977.15 NODE_51461_length_352_cov_3.482650_g43549_i0forward_frame_1 - 0.0021 17.8 0.2 0.003 17.3 0.2 1.3 1 0 0 1 1 1 1 Septum formation initiator Imm-NTF2 PF15655.6 NODE_51461_length_352_cov_3.482650_g43549_i0forward_frame_1 - 0.026 14.8 0.1 0.032 14.5 0.1 1.1 1 0 0 1 1 1 0 NTF2 fold immunity protein Response_reg PF00072.24 NODE_51460_length_352_cov_3.621451_g43548_i0reverse_frame_1 - 0.0066 16.6 0.1 0.0086 16.2 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain NBP1 PF08537.10 NODE_51457_length_352_cov_20.801262_g43545_i0reverse_frame_1 - 0.045 13.2 4.2 0.046 13.1 4.2 1.2 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 Vfa1 PF08432.10 NODE_51457_length_352_cov_20.801262_g43545_i0reverse_frame_1 - 4.5 7.6 9.6 5.7 7.2 9.6 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 2OG-FeII_Oxy_3 PF13640.6 NODE_51445_length_352_cov_84.362776_g43533_i0forward_frame_1 - 1.6e-05 25.7 0.0 2e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 NODE_51445_length_352_cov_84.362776_g43533_i0forward_frame_1 - 0.053 13.9 0.0 0.065 13.7 0.0 1.2 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy PF03171.20 NODE_51445_length_352_cov_84.362776_g43533_i0forward_frame_1 - 0.058 13.9 0.0 0.075 13.5 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 NODE_51445_length_352_cov_84.362776_g43533_i0forward_frame_1 - 0.12 13.1 0.0 0.17 12.5 0.0 1.3 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily 40S_S4_C PF16121.5 NODE_51439_length_352_cov_95.195584_g43527_i0reverse_frame_1 - 1e-24 85.9 0.0 1.3e-24 85.5 0.0 1.2 1 0 0 1 1 1 1 40S ribosomal protein S4 C-terminus DUF620 PF04788.12 NODE_51437_length_352_cov_100.580442_g43525_i0forward_frame_1 - 0.011 15.2 0.0 0.014 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF620) RCC1_2 PF13540.6 NODE_51433_length_352_cov_120.375394_g43521_i0forward_frame_1 - 6.8e-06 25.8 1.8 0.0028 17.4 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat K_channel_TID PF07941.11 NODE_51433_length_352_cov_120.375394_g43521_i0forward_frame_1 - 8.8 6.9 9.0 3.2 8.3 1.7 2.2 1 1 1 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain PAS_2 PF08446.11 NODE_51421_length_352_cov_352.883281_g43509_i0forward_frame_1 - 0.037 14.7 0.0 0.047 14.4 0.0 1.3 1 0 0 1 1 1 0 PAS fold PH_3 PF14593.6 NODE_51411_length_353_cov_1.937107_g43499_i0reverse_frame_1 - 0.014 15.5 0.6 0.019 15.1 0.6 1.2 1 0 0 1 1 1 0 PH domain Kelch_3 PF13415.6 NODE_51409_length_353_cov_2.006289_g43497_i0forward_frame_1 - 0.00015 21.9 0.2 0.0041 17.4 0.0 2.2 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_51409_length_353_cov_2.006289_g43497_i0forward_frame_1 - 0.0018 18.2 1.0 0.21 11.6 0.0 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_51409_length_353_cov_2.006289_g43497_i0forward_frame_1 - 0.0029 17.6 0.4 0.55 10.3 0.2 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain AdoMet_MTase PF07757.13 NODE_51404_length_353_cov_2.490566_g43492_i0forward_frame_1 - 0.0057 17.0 0.1 0.0072 16.6 0.1 1.1 1 0 0 1 1 1 1 Predicted AdoMet-dependent methyltransferase FAM193_C PF15914.5 NODE_51375_length_353_cov_68.207547_g43463_i0reverse_frame_1 - 0.12 12.1 1.0 0.27 11.0 1.0 1.6 1 0 0 1 1 1 0 FAM193 family C-terminal MAP7 PF05672.11 NODE_51372_length_353_cov_70.924528_g43460_i0reverse_frame_1 - 0.0087 15.8 53.7 0.011 15.4 53.7 1.1 1 0 0 1 1 1 1 MAP7 (E-MAP-115) family TPD52 PF04201.15 NODE_51368_length_353_cov_77.650943_g43456_i0forward_frame_1 - 0.096 12.3 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Tumour protein D52 family GBP_C PF02841.14 NODE_51366_length_353_cov_86.327044_g43454_i0forward_frame_1 - 0.057 12.8 0.0 0.07 12.5 0.0 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF3660 PF12398.8 NODE_51361_length_353_cov_109.336478_g43449_i0forward_frame_1 - 0.14 12.3 0.1 0.27 11.3 0.1 1.4 1 0 0 1 1 1 0 Receptor serine/threonine kinase Not3 PF04065.15 NODE_51354_length_353_cov_158.396226_g43442_i0reverse_frame_1 - 0.0095 15.4 0.4 0.011 15.2 0.4 1.1 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component Phage_holin_3_6 PF07332.11 NODE_51354_length_353_cov_158.396226_g43442_i0forward_frame_1 - 7.5 6.6 10.1 9.8 6.3 10.1 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3660 PF12398.8 NODE_51349_length_353_cov_243.223270_g43437_i0reverse_frame_1 - 0.14 12.2 0.1 0.27 11.3 0.1 1.4 1 0 0 1 1 1 0 Receptor serine/threonine kinase DUF3804 PF12707.7 NODE_51340_length_354_cov_1.225705_g43428_i0reverse_frame_1 - 0.053 13.2 0.4 0.082 12.6 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3804) DUF2079 PF09852.9 NODE_51340_length_354_cov_1.225705_g43428_i0forward_frame_1 - 0.07 12.0 0.8 0.077 11.8 0.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) DUF5611 PF18446.1 NODE_51339_length_354_cov_1.341693_g43427_i0reverse_frame_1 - 0.039 14.8 2.8 0.048 14.5 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5611) YvbH_ext PF11724.8 NODE_51339_length_354_cov_1.341693_g43427_i0reverse_frame_1 - 0.12 12.8 0.4 0.12 12.8 0.4 2.2 2 1 0 2 2 2 0 YvbH-like oligomerisation region CREPT PF16566.5 NODE_51339_length_354_cov_1.341693_g43427_i0reverse_frame_1 - 0.4 10.9 7.1 2.8 8.1 1.5 2.0 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour PBP_sp32 PF07222.12 NODE_51331_length_354_cov_1.821317_g43419_i0reverse_frame_1 - 4.7 6.6 8.6 5.6 6.3 8.6 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Lamprin PF06403.11 NODE_51327_length_354_cov_1.909091_g43415_i0forward_frame_1 - 0.13 12.2 2.8 0.16 12.0 2.8 1.1 1 0 0 1 1 1 0 Lamprin DUF3290 PF11694.8 NODE_51325_length_354_cov_2.034483_g43413_i0forward_frame_1 - 0.014 15.4 2.7 0.016 15.1 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DUF3381 PF11861.8 NODE_51316_length_354_cov_2.379310_g43404_i0reverse_frame_1 - 0.043 13.6 2.2 0.056 13.2 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) WSS_VP PF12175.8 NODE_51308_length_354_cov_3.018809_g43396_i0reverse_frame_1 - 0.065 12.7 0.1 0.087 12.3 0.1 1.2 1 0 0 1 1 1 0 White spot syndrome virus structural envelope protein VP P63C PF10546.9 NODE_51307_length_354_cov_3.025078_g43395_i0reverse_frame_1 - 0.067 13.8 0.0 0.084 13.5 0.0 1.1 1 0 0 1 1 1 0 P63C domain PMI_typeI PF01238.21 NODE_51306_length_354_cov_3.260188_g43394_i0reverse_frame_1 - 1.4e-42 146.2 0.0 1.6e-42 146.1 0.0 1.0 1 0 0 1 1 1 1 Phosphomannose isomerase type I NAM-associated PF14303.6 NODE_51302_length_354_cov_4.000000_g43390_i0reverse_frame_1 - 0.059 14.1 2.4 0.062 14.0 2.4 1.1 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain V-ATPase_H_N PF03224.14 NODE_51301_length_354_cov_4.463950_g43389_i0reverse_frame_1 - 0.05 12.9 0.3 0.053 12.8 0.3 1.2 1 0 0 1 1 1 0 V-ATPase subunit H Sid-5 PF17204.3 NODE_51300_length_354_cov_5.758621_g43388_i0reverse_frame_1 - 0.11 12.7 0.1 0.14 12.4 0.1 1.2 1 0 0 1 1 1 0 Sid-5 family WBP-1 PF11669.8 NODE_51300_length_354_cov_5.758621_g43388_i0forward_frame_1 - 0.16 12.6 5.3 0.25 12.0 5.3 1.3 1 0 0 1 1 1 0 WW domain-binding protein 1 VHS PF00790.19 NODE_51298_length_354_cov_22.510972_g43386_i0reverse_frame_1 - 8.6e-12 45.1 0.3 1.1e-11 44.7 0.3 1.1 1 0 0 1 1 1 1 VHS domain Pkinase PF00069.25 NODE_51297_length_354_cov_26.909091_g43385_i0reverse_frame_1 - 0.00014 21.3 0.0 0.00017 21.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Cytokin-bind PF09265.10 NODE_51297_length_354_cov_26.909091_g43385_i0reverse_frame_1 - 0.021 14.2 0.0 0.022 14.1 0.0 1.1 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding Claudin_3 PF06653.11 NODE_51295_length_354_cov_53.084639_g43383_i0reverse_frame_1 - 6.7 6.6 15.5 11 5.9 15.3 1.5 1 1 0 1 1 1 0 Tight junction protein, Claudin-like TP_methylase PF00590.20 NODE_51290_length_354_cov_69.009404_g43378_i0reverse_frame_1 - 1.5e-06 28.3 0.0 1.7e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF2101 PF09874.9 NODE_51290_length_354_cov_69.009404_g43378_i0forward_frame_1 - 9.9 5.8 12.5 11 5.6 12.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Sdh_cyt PF01127.22 NODE_51271_length_354_cov_121.645768_g43359_i0reverse_frame_1 - 0.029 14.4 0.9 0.039 14.0 0.9 1.2 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Pex24p PF06398.11 NODE_51271_length_354_cov_121.645768_g43359_i0reverse_frame_1 - 0.031 13.3 1.3 0.033 13.2 1.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2924 PF11149.8 NODE_51257_length_354_cov_591.542320_g43346_i0forward_frame_1 - 0.016 15.6 0.0 0.02 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2924) Spike_NTD PF16451.5 NODE_51250_length_355_cov_1.312500_g43340_i0forward_frame_3 - 0.068 12.5 3.6 0.16 11.3 2.4 1.8 1 1 1 2 2 2 0 Spike glycoprotein N-terminal domain zf-CCHC_3 PF13917.6 NODE_51249_length_355_cov_1.528125_g43339_i0reverse_frame_2 - 0.002 18.0 1.6 0.0038 17.2 1.6 1.5 1 0 0 1 1 1 1 Zinc knuckle zf-RRN7 PF11781.8 NODE_51249_length_355_cov_1.528125_g43339_i0reverse_frame_2 - 5.2 6.8 5.8 4.1 7.2 1.3 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 ABC_trans_CmpB PF06541.11 NODE_51249_length_355_cov_1.528125_g43339_i0forward_frame_3 - 0.056 13.7 0.2 0.08 13.2 0.2 1.4 1 1 0 1 1 1 0 Putative ABC-transporter type IV DivIC PF04977.15 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.015 15.0 0.4 0.015 15.0 0.4 2.1 2 0 0 2 2 2 0 Septum formation initiator Cnn_1N PF07989.11 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.043 14.0 0.6 0.043 14.0 0.6 2.1 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 GIT_CC PF16559.5 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.047 13.6 0.1 0.047 13.6 0.1 1.6 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor HALZ PF02183.18 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.056 13.7 0.5 0.056 13.7 0.5 2.0 2 0 0 2 2 2 0 Homeobox associated leucine zipper bZIP_2 PF07716.15 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.13 12.4 0.6 0.13 12.4 0.6 2.2 2 0 0 2 2 2 0 Basic region leucine zipper bZIP_1 PF00170.21 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 5.9 7.1 7.9 0.38 10.9 0.9 2.1 2 0 0 2 2 2 0 bZIP transcription factor RNA_pol_Rpb1_2 PF00623.20 NODE_51245_length_355_cov_1.618750_g43335_i0reverse_frame_3 - 6.3e-28 98.1 0.0 8.7e-26 91.1 0.0 2.0 1 1 1 2 2 2 2 RNA polymerase Rpb1, domain 2 gpUL132 PF11359.8 NODE_51233_length_355_cov_2.118750_g43323_i0reverse_frame_3 - 0.07 12.7 0.0 0.081 12.5 0.0 1.2 1 0 0 1 1 1 0 Glycoprotein UL132 Pectate_lyase_2 PF06917.12 NODE_51233_length_355_cov_2.118750_g43323_i0reverse_frame_3 - 0.15 10.6 0.0 0.18 10.4 0.0 1.0 1 0 0 1 1 1 0 Periplasmic pectate lyase Terminase_4 PF05119.12 NODE_51233_length_355_cov_2.118750_g43323_i0reverse_frame_3 - 0.22 12.0 0.5 1.3 9.5 0.2 2.0 2 0 0 2 2 2 0 Phage terminase, small subunit Toxin_25 PF08095.11 NODE_51231_length_355_cov_2.271875_g43321_i0reverse_frame_2 - 0.53 10.3 4.4 1.4 9.0 4.4 1.7 1 0 0 1 1 1 0 Hefutoxin family HELP PF03451.14 NODE_51230_length_355_cov_2.296875_g43320_i0reverse_frame_3 - 0.041 13.7 0.0 0.057 13.3 0.0 1.2 1 0 0 1 1 1 0 HELP motif DUF5339 PF17274.2 NODE_51226_length_355_cov_2.490625_g43316_i0reverse_frame_3 - 0.19 12.6 4.7 0.23 12.3 3.8 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5339) AGT PF11440.8 NODE_51226_length_355_cov_2.490625_g43316_i0forward_frame_2 - 0.022 13.8 0.1 0.023 13.8 0.1 1.1 1 0 0 1 1 1 0 DNA alpha-glucosyltransferase Lipoprotein_X PF03305.13 NODE_51225_length_355_cov_2.678125_g43315_i0forward_frame_3 - 0.0022 17.8 0.1 0.0028 17.5 0.1 1.2 1 0 0 1 1 1 1 Mycoplasma MG185/MG260 protein Ion_trans PF00520.31 NODE_51224_length_355_cov_2.703125_g43314_i0forward_frame_2 - 1.6e-09 37.4 3.2 1.8e-09 37.2 3.2 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 NODE_51224_length_355_cov_2.703125_g43314_i0forward_frame_2 - 0.037 12.7 0.4 0.045 12.4 0.4 1.1 1 0 0 1 1 1 0 Polycystin cation channel MotA_ExbB PF01618.16 NODE_51222_length_355_cov_2.865625_g43312_i0reverse_frame_3 - 0.044 13.5 0.2 0.057 13.2 0.2 1.3 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family DUF3399 PF11879.8 NODE_51222_length_355_cov_2.865625_g43312_i0reverse_frame_2 - 0.2 12.0 4.3 0.27 11.6 4.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) SURNod19 PF07712.12 NODE_51220_length_355_cov_3.021875_g43310_i0reverse_frame_2 - 0.08 11.7 0.2 0.087 11.6 0.2 1.0 1 0 0 1 1 1 0 Stress up-regulated Nod 19 RIIa PF02197.17 NODE_51220_length_355_cov_3.021875_g43310_i0forward_frame_2 - 0.13 12.0 0.1 0.24 11.1 0.1 1.5 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit TssN PF17555.2 NODE_51220_length_355_cov_3.021875_g43310_i0forward_frame_2 - 0.14 11.5 4.5 0.7 9.2 4.5 1.8 1 1 0 1 1 1 0 Type VI secretion system, TssN IL17_R_N PF15037.6 NODE_51218_length_355_cov_3.196875_g43308_i0reverse_frame_2 - 0.11 11.4 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Interleukin-17 receptor extracellular region Exonuc_VII_S PF02609.16 NODE_51217_length_355_cov_3.234375_g43307_i0reverse_frame_3 - 0.0071 16.4 0.1 0.014 15.5 0.1 1.4 1 0 0 1 1 1 1 Exonuclease VII small subunit HAD_SAK_2 PF18143.1 NODE_51217_length_355_cov_3.234375_g43307_i0reverse_frame_3 - 0.073 13.4 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 HAD domain in Swiss Army Knife RNA repair proteins Put_Phosphatase PF06888.12 NODE_51215_length_355_cov_3.400000_g43305_i0forward_frame_2 - 0.04 13.3 0.3 0.05 13.0 0.3 1.1 1 0 0 1 1 1 0 Putative Phosphatase zf-C3HC4_3 PF13920.6 NODE_51210_length_355_cov_5.153125_g43300_i0forward_frame_3 - 3.8e-08 33.0 0.9 5.7e-08 32.5 0.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_51210_length_355_cov_5.153125_g43300_i0forward_frame_3 - 1.8e-05 24.5 1.1 2.5e-05 24.0 1.1 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 NODE_51210_length_355_cov_5.153125_g43300_i0forward_frame_3 - 0.0091 16.3 0.7 0.015 15.6 0.7 1.3 1 0 0 1 1 1 1 Ring finger domain GLEYA PF10528.9 NODE_51209_length_355_cov_5.740625_g43299_i0forward_frame_2 - 1.8e-06 28.3 1.9 2.2e-06 28.0 1.9 1.1 1 0 0 1 1 1 1 GLEYA domain PA14 PF07691.12 NODE_51209_length_355_cov_5.740625_g43299_i0forward_frame_2 - 0.00032 20.5 0.4 0.00061 19.6 0.4 1.4 1 1 0 1 1 1 1 PA14 domain SSF PF00474.17 NODE_51208_length_355_cov_5.950000_g43298_i0forward_frame_2 - 1.1e-16 60.7 2.0 1.2e-16 60.6 2.0 1.0 1 0 0 1 1 1 1 Sodium:solute symporter family Pkinase PF00069.25 NODE_51207_length_355_cov_8.562500_g43297_i0reverse_frame_2 - 1.5e-05 24.5 0.0 1.8e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain ubiquitin PF00240.23 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 7.1e-40 134.6 6.8 7.7e-34 115.3 0.3 2.9 3 0 0 3 3 3 2 Ubiquitin family Rad60-SLD PF11976.8 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 7.5e-17 60.9 5.1 9.9e-16 57.3 0.7 2.7 3 0 0 3 3 3 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 1.8e-06 28.3 0.3 0.00011 22.5 0.1 2.8 2 1 0 2 2 2 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.0022 18.3 0.4 0.0034 17.7 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.0033 17.5 0.3 0.0082 16.2 0.3 1.8 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like TBK1_ULD PF18396.1 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.0038 17.1 0.0 0.0053 16.7 0.0 1.4 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_4 PF18036.1 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.0064 16.5 1.9 5.8 7.0 0.0 3.0 3 0 0 3 3 3 2 Ubiquitin-like domain DUF2407 PF10302.9 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.012 16.2 0.3 0.015 15.9 0.3 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.045 13.6 0.7 0.28 11.0 0.1 2.1 1 1 1 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain Methyltrans_RNA PF04452.14 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.065 12.6 0.1 0.49 9.7 0.0 1.9 2 0 0 2 2 2 0 RNA methyltransferase DUF2170 PF09938.9 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.12 12.1 0.0 15 5.3 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2170) DUF4257 PF14074.6 NODE_51205_length_355_cov_37.112500_g43295_i0forward_frame_3 - 0.0027 17.9 0.0 0.11 12.7 0.0 2.3 2 1 0 2 2 2 1 Protein of unknown function (DUF4257) TM1506 PF08973.10 NODE_51205_length_355_cov_37.112500_g43295_i0forward_frame_3 - 0.013 15.2 0.0 1.7 8.3 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1893) ubiquitin PF00240.23 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 7.1e-40 134.6 6.8 7.7e-34 115.3 0.3 2.9 3 0 0 3 3 3 2 Ubiquitin family Rad60-SLD PF11976.8 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 7.5e-17 60.9 5.1 9.9e-16 57.3 0.7 2.7 3 0 0 3 3 3 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 1.8e-06 28.3 0.3 0.00011 22.5 0.1 2.8 2 1 0 2 2 2 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.0022 18.3 0.4 0.0034 17.7 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.0033 17.5 0.3 0.0082 16.2 0.3 1.8 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like TBK1_ULD PF18396.1 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.0038 17.1 0.0 0.0053 16.7 0.0 1.4 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_4 PF18036.1 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.0064 16.5 1.9 5.8 7.0 0.0 3.0 3 0 0 3 3 3 2 Ubiquitin-like domain DUF2407 PF10302.9 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.012 16.2 0.3 0.015 15.9 0.3 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.045 13.6 0.7 0.28 11.0 0.1 2.1 1 1 1 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain Methyltrans_RNA PF04452.14 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.065 12.6 0.1 0.49 9.7 0.0 1.9 2 0 0 2 2 2 0 RNA methyltransferase DUF2170 PF09938.9 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.12 12.1 0.0 15 5.3 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2170) CNP1 PF08750.11 NODE_51202_length_355_cov_52.621875_g43292_i0reverse_frame_2 - 0.09 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 CNP1-like family FYVE PF01363.21 NODE_51202_length_355_cov_52.621875_g43292_i0forward_frame_2 - 0.33 11.1 6.5 0.44 10.7 6.5 1.4 1 1 0 1 1 1 0 FYVE zinc finger NKAIN PF05640.14 NODE_51197_length_355_cov_60.896875_g43287_i0reverse_frame_3 - 0.012 14.8 0.0 0.015 14.5 0.0 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein ABC2_membrane_3 PF12698.7 NODE_51194_length_355_cov_64.581250_g43284_i0reverse_frame_3 - 0.33 10.0 1.7 0.36 9.9 1.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF5104 PF17117.5 NODE_51193_length_355_cov_65.025000_g43283_i0forward_frame_3 - 0.031 14.7 4.3 0.2 12.1 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5104) RecG_N PF17190.4 NODE_51192_length_355_cov_66.425000_g43282_i0reverse_frame_2 - 0.029 15.1 0.5 0.029 15.1 0.5 1.5 2 0 0 2 2 2 0 RecG N-terminal helical domain DNA_pol_B_exo1 PF03104.19 NODE_51191_length_355_cov_72.562500_g43281_i0forward_frame_2 - 3.1e-06 26.5 0.4 3.5e-06 26.4 0.4 1.0 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain Lentivirus_VIF PF05851.11 NODE_51191_length_355_cov_72.562500_g43281_i0forward_frame_2 - 0.059 12.3 0.5 0.11 11.3 0.2 1.5 1 1 1 2 2 2 0 Lentivirus virion infectivity factor (VIF) PUFD PF16553.5 NODE_51191_length_355_cov_72.562500_g43281_i0forward_frame_2 - 0.088 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 BCORL-PCGF1-binding domain DUF4702 PF15774.5 NODE_51187_length_355_cov_76.140625_g43277_i0reverse_frame_3 - 0.03 13.3 0.1 0.044 12.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4702) DUF116 PF01976.17 NODE_51179_length_355_cov_93.934375_g43269_i0forward_frame_3 - 0.025 14.1 0.0 0.028 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF116 Ribosomal_S25 PF03297.15 NODE_51163_length_355_cov_859.412500_g43254_i0reverse_frame_2 - 4.1e-36 123.2 8.1 4.6e-36 123.1 8.1 1.0 1 0 0 1 1 1 1 S25 ribosomal protein Fe_dep_repress PF01325.19 NODE_51163_length_355_cov_859.412500_g43254_i0reverse_frame_2 - 0.0036 17.5 0.3 0.018 15.2 0.2 1.9 1 1 1 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 NODE_51163_length_355_cov_859.412500_g43254_i0reverse_frame_2 - 0.052 13.1 0.0 0.071 12.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding EF-hand_2 PF09068.11 NODE_51161_length_355_cov_2676.871875_g43252_i0forward_frame_3 - 0.045 13.9 2.9 0.06 13.5 2.9 1.1 1 0 0 1 1 1 0 EF hand L51_S25_CI-B8 PF05047.16 NODE_51161_length_355_cov_2676.871875_g43252_i0forward_frame_2 - 1.7e-06 27.9 0.0 2.7e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain TB2_DP1_HVA22 PF03134.19 NODE_51159_length_355_cov_11029.965625_g43250_i0reverse_frame_2 - 2.5e-06 27.3 0.2 2.5e-06 27.3 0.2 1.8 1 1 1 2 2 2 1 TB2/DP1, HVA22 family FtsX PF02687.21 NODE_51159_length_355_cov_11029.965625_g43250_i0reverse_frame_2 - 0.1 13.1 2.0 0.18 12.3 1.9 1.5 1 1 0 1 1 1 0 FtsX-like permease family DUF3899 PF13038.6 NODE_51159_length_355_cov_11029.965625_g43250_i0reverse_frame_2 - 0.33 11.5 5.4 0.3 11.6 3.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3899) SIT PF15330.6 NODE_51157_length_355_cov_14157.656250_g43248_i0reverse_frame_2 - 0.15 12.5 0.0 0.31 11.5 0.0 1.5 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT GBR2_CC PF18455.1 NODE_51154_length_356_cov_1.467290_g43245_i0reverse_frame_3 - 0.15 12.2 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain Neur PF00064.18 NODE_51154_length_356_cov_1.467290_g43245_i0forward_frame_3 - 0.11 11.3 0.1 0.12 11.1 0.1 1.1 1 0 0 1 1 1 0 Neuraminidase Sgf11 PF08209.11 NODE_51154_length_356_cov_1.467290_g43245_i0forward_frame_2 - 1.8 8.2 5.1 0.72 9.5 1.5 2.0 1 1 1 2 2 2 0 Sgf11 (transcriptional regulation protein) MutS_IV PF05190.18 NODE_51152_length_356_cov_1.663551_g43243_i0forward_frame_3 - 4.3e-08 33.4 3.4 5.2e-08 33.1 3.4 1.1 1 0 0 1 1 1 1 MutS family domain IV DUF4714 PF15833.5 NODE_51146_length_356_cov_1.990654_g43237_i0forward_frame_3 - 0.23 11.4 1.9 0.31 11.0 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) DUF2633 PF11119.8 NODE_51146_length_356_cov_1.990654_g43237_i0forward_frame_3 - 7.5 6.5 8.7 0.38 10.7 1.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2633) DUF1018 PF06252.12 NODE_51143_length_356_cov_2.121495_g43234_i0forward_frame_3 - 0.42 11.6 2.8 0.53 11.3 2.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1018) PhoLip_ATPase_N PF16209.5 NODE_51140_length_356_cov_2.264798_g43231_i0forward_frame_3 - 5.9 6.7 12.1 0.069 12.9 3.7 1.9 2 0 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal Kinesin PF00225.23 NODE_51139_length_356_cov_2.277259_g43230_i0forward_frame_3 - 1.2e-28 100.0 1.9 1.3e-28 99.9 1.9 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_51139_length_356_cov_2.277259_g43230_i0forward_frame_3 - 0.00062 19.7 0.4 0.0022 17.9 0.1 1.8 2 0 0 2 2 2 1 Microtubule binding DUF4328 PF14219.6 NODE_51138_length_356_cov_2.280374_g43229_i0forward_frame_2 - 0.11 12.0 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4328) Viral_DNA_bi PF02236.17 NODE_51137_length_356_cov_2.370717_g43228_i0reverse_frame_2 - 0.13 12.4 0.1 0.23 11.7 0.1 1.4 1 0 0 1 1 1 0 Viral DNA-binding protein, all alpha domain YWFCY PF14293.6 NODE_51132_length_356_cov_2.542056_g43223_i0reverse_frame_3 - 0.48 10.8 5.4 0.15 12.4 1.5 2.0 2 0 0 2 2 2 0 YWFCY protein Trp_syntA PF00290.20 NODE_51129_length_356_cov_2.585670_g43220_i0reverse_frame_3 - 2.4e-41 141.3 0.1 2.7e-41 141.2 0.1 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain DUF4329 PF14220.6 NODE_51128_length_356_cov_2.610592_g43219_i0reverse_frame_3 - 6.3e-34 116.5 0.5 6.9e-34 116.4 0.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4329) RVT_1 PF00078.27 NODE_51127_length_356_cov_2.672897_g43218_i0forward_frame_3 - 0.0019 17.8 0.0 0.0021 17.6 0.0 1.2 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) LRR_5 PF13306.6 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_2 - 0.08 12.9 0.9 0.48 10.4 0.9 1.9 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) Ion_trans PF00520.31 NODE_51122_length_356_cov_2.844237_g43213_i0forward_frame_3 - 4.7e-06 26.0 8.6 5.7e-06 25.7 8.6 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 NODE_51122_length_356_cov_2.844237_g43213_i0forward_frame_3 - 0.0088 14.8 9.3 0.01 14.5 9.3 1.0 1 0 0 1 1 1 1 Polycystin cation channel MR_MLE_C PF13378.6 NODE_51121_length_356_cov_2.878505_g43212_i0reverse_frame_3 - 8.5e-18 64.7 0.0 9.6e-18 64.5 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like DUF285 PF03382.14 NODE_51118_length_356_cov_3.127726_g43209_i0reverse_frame_3 - 0.15 11.8 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Mycoplasma protein of unknown function, DUF285 zf-C4_ClpX PF06689.13 NODE_51116_length_356_cov_3.454829_g43207_i0reverse_frame_2 - 0.03 14.2 6.0 2.2 8.2 0.6 3.0 3 0 0 3 3 3 0 ClpX C4-type zinc finger DZR PF12773.7 NODE_51116_length_356_cov_3.454829_g43207_i0reverse_frame_2 - 0.54 10.3 6.1 2.4 8.3 6.1 1.8 1 1 0 1 1 1 0 Double zinc ribbon Cys_rich_VLP PF14194.6 NODE_51108_length_356_cov_50.498442_g43199_i0reverse_frame_3 - 0.15 12.2 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 Cysteine-rich VLP IL17R_D_N PF16742.5 NODE_51105_length_356_cov_57.551402_g43196_i0reverse_frame_3 - 0.015 15.3 0.1 0.021 14.8 0.1 1.3 1 0 0 1 1 1 0 N-terminus of interleukin 17 receptor D Ank_4 PF13637.6 NODE_51101_length_356_cov_70.370717_g43192_i0forward_frame_2 - 3.8e-06 27.3 0.1 5.6e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_51101_length_356_cov_70.370717_g43192_i0forward_frame_2 - 1.8e-05 25.3 0.0 2.3e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_51101_length_356_cov_70.370717_g43192_i0forward_frame_2 - 0.0056 17.0 0.7 0.22 11.9 0.1 1.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_51101_length_356_cov_70.370717_g43192_i0forward_frame_2 - 0.016 15.6 2.4 1 9.9 0.5 2.2 1 1 1 2 2 2 0 Ankyrin repeat ATG27 PF09451.10 NODE_51098_length_356_cov_73.962617_g43189_i0forward_frame_2 - 0.071 12.9 0.2 0.096 12.5 0.2 1.1 1 0 0 1 1 1 0 Autophagy-related protein 27 WHH PF14414.6 NODE_51097_length_356_cov_74.034268_g43188_i0reverse_frame_3 - 0.1 12.4 1.0 0.2 11.5 1.0 1.4 1 0 0 1 1 1 0 A nuclease of the HNH/ENDO VII superfamily with conserved WHH AbiEi_3_N PF17194.4 NODE_51096_length_356_cov_74.566978_g43187_i0reverse_frame_3 - 0.092 12.8 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin N-terminal domain DUF1932 PF09130.11 NODE_51096_length_356_cov_74.566978_g43187_i0forward_frame_3 - 0.064 13.2 4.1 0.13 12.3 4.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) Ku_C PF03730.14 NODE_51096_length_356_cov_74.566978_g43187_i0forward_frame_3 - 0.11 13.2 8.2 0.16 12.7 8.2 1.3 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm Peptidase_C37 PF05416.12 NODE_51096_length_356_cov_74.566978_g43187_i0forward_frame_3 - 0.17 10.4 7.8 0.17 10.3 7.8 1.0 1 0 0 1 1 1 0 Southampton virus-type processing peptidase IQ PF00612.27 NODE_51095_length_356_cov_77.937695_g43186_i0reverse_frame_3 - 2.3 8.2 0.0 2.3 8.2 0.0 3.0 3 1 0 3 3 3 0 IQ calmodulin-binding motif DUF4029 PF13221.6 NODE_51087_length_356_cov_96.236760_g43178_i0forward_frame_3 - 0.14 12.8 2.3 0.098 13.3 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4029) TPR_14 PF13428.6 NODE_51084_length_356_cov_100.177570_g43175_i0reverse_frame_3 - 0.021 15.6 0.9 0.021 15.6 0.9 2.0 2 1 0 2 2 2 0 Tetratricopeptide repeat Acyl-CoA_dh_N PF02771.16 NODE_51082_length_356_cov_101.523364_g43173_i0forward_frame_3 - 4.9e-09 36.9 0.0 5.8e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain DUF979 PF06166.12 NODE_51079_length_356_cov_109.654206_g43170_i0reverse_frame_3 - 0.039 13.1 0.2 0.054 12.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF979) Toxin_33 PF08121.11 NODE_51078_length_356_cov_110.644860_g43169_i0reverse_frame_2 - 0.092 12.5 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Waglerin family DUF3678 PF12435.8 NODE_51076_length_356_cov_115.445483_g43167_i0forward_frame_3 - 3.7 7.0 6.5 1.1 8.6 1.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) FtsX PF02687.21 NODE_51076_length_356_cov_115.445483_g43167_i0forward_frame_2 - 0.22 12.0 5.1 0.41 11.1 5.1 1.4 1 0 0 1 1 1 0 FtsX-like permease family NurA PF09376.10 NODE_51074_length_356_cov_119.099688_g43165_i0reverse_frame_3 - 0.022 14.4 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 NurA domain Ion_trans PF00520.31 NODE_51058_length_357_cov_1.046584_g43150_i0forward_frame_2 - 0.00022 20.6 3.9 0.00024 20.4 3.9 1.1 1 0 0 1 1 1 1 Ion transport protein APOC4 PF15119.6 NODE_51056_length_357_cov_1.239130_g43148_i0reverse_frame_3 - 0.05 13.9 0.0 0.063 13.5 0.0 1.2 1 0 0 1 1 1 0 Apolipoprotein C4 YnfE PF17452.2 NODE_51056_length_357_cov_1.239130_g43148_i0reverse_frame_3 - 0.21 11.9 6.3 0.43 10.9 5.9 1.7 1 1 1 2 2 2 0 Uncharacterized YnfE-like Bee_toxin PF17454.2 NODE_51056_length_357_cov_1.239130_g43148_i0forward_frame_3 - 1.1 9.4 7.4 0.75 9.9 5.1 2.0 1 1 1 2 2 2 0 Honey bee toxin UBA2_C PF16195.5 NODE_51055_length_357_cov_1.245342_g43147_i0reverse_frame_3 - 0.89 10.3 6.7 1.1 9.9 6.7 1.1 1 0 0 1 1 1 0 SUMO-activating enzyme subunit 2 C-terminus M-factor PF03855.13 NODE_51055_length_357_cov_1.245342_g43147_i0reverse_frame_2 - 0.023 14.9 0.0 0.037 14.2 0.0 1.3 1 0 0 1 1 1 0 M-factor FG-GAP PF01839.23 NODE_51049_length_357_cov_1.850932_g43141_i0forward_frame_2 - 0.00057 20.0 0.0 0.0013 18.8 0.0 1.7 1 0 0 1 1 1 1 FG-GAP repeat VCBS PF13517.6 NODE_51049_length_357_cov_1.850932_g43141_i0forward_frame_2 - 0.0016 19.0 0.1 0.0074 16.8 0.1 2.1 1 1 0 1 1 1 1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella MSA-2c PF12238.8 NODE_51048_length_357_cov_1.996894_g43140_i0reverse_frame_3 - 3.3 7.7 7.9 3.6 7.5 7.9 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF5381 PF17353.2 NODE_51046_length_357_cov_2.086957_g43138_i0forward_frame_3 - 0.0091 15.8 0.7 0.011 15.5 0.7 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5381) UPF0542 PF15086.6 NODE_51046_length_357_cov_2.086957_g43138_i0forward_frame_2 - 0.035 14.0 0.9 0.066 13.1 0.1 2.0 1 1 2 3 3 3 0 Uncharacterised protein family UPF0542 DUF3007 PF11460.8 NODE_51046_length_357_cov_2.086957_g43138_i0forward_frame_2 - 0.15 12.3 1.4 0.21 11.9 1.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3007) ADH_zinc_N PF00107.26 NODE_51042_length_357_cov_2.453416_g43134_i0forward_frame_2 - 0.0097 15.9 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 NODE_51042_length_357_cov_2.453416_g43134_i0forward_frame_2 - 0.014 16.4 0.0 0.017 16.1 0.0 1.2 1 0 0 1 1 1 0 Zinc-binding dehydrogenase PDT PF00800.18 NODE_51042_length_357_cov_2.453416_g43134_i0forward_frame_2 - 0.041 13.7 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 Prephenate dehydratase PRA-PH PF01503.17 NODE_51041_length_357_cov_2.583851_g43133_i0reverse_frame_3 - 1.3e-14 54.4 0.1 1.6e-14 54.1 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 NODE_51041_length_357_cov_2.583851_g43133_i0reverse_frame_3 - 0.012 15.7 0.1 0.017 15.3 0.1 1.2 1 0 0 1 1 1 0 MazG nucleotide pyrophosphohydrolase domain FBD PF08387.10 NODE_51041_length_357_cov_2.583851_g43133_i0forward_frame_2 - 0.11 12.4 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 FBD TAT_signal PF10518.9 NODE_51040_length_357_cov_2.956522_g43132_i0forward_frame_3 - 0.00041 20.1 1.0 0.00074 19.3 1.0 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence MdoG PF04349.12 NODE_51040_length_357_cov_2.956522_g43132_i0forward_frame_3 - 0.058 12.3 0.0 0.074 12.0 0.0 1.1 1 0 0 1 1 1 0 Periplasmic glucan biosynthesis protein, MdoG # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks197.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks197.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks197.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks197.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:00:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MAGSP PF03082.14 NODE_51039_length_357_cov_2.965839_g43131_i0reverse_frame_2 - 0.0039 16.9 0.2 0.0047 16.6 0.2 1.1 1 0 0 1 1 1 1 Male accessory gland secretory protein DUF2527 PF10736.9 NODE_51035_length_357_cov_3.347826_g43127_i0reverse_frame_2 - 0.033 14.0 0.1 0.059 13.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) Dzip-like_N PF13815.6 NODE_51035_length_357_cov_3.347826_g43127_i0forward_frame_2 - 1.5e-06 28.2 0.6 2.5e-06 27.5 0.6 1.3 1 0 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal YMF19 PF02326.15 NODE_51035_length_357_cov_3.347826_g43127_i0forward_frame_2 - 0.056 14.2 0.4 0.15 12.8 0.3 1.7 2 0 0 2 2 2 0 Plant ATP synthase F0 Lipase_2 PF01674.18 NODE_51032_length_357_cov_3.602484_g43124_i0reverse_frame_2 - 0.054 13.0 0.4 0.06 12.9 0.4 1.1 1 0 0 1 1 1 0 Lipase (class 2) DUF4981 PF16353.5 NODE_51030_length_357_cov_4.649068_g43122_i0reverse_frame_3 - 0.083 13.4 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function(DUF4981) PT PF04886.12 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_3 - 2 8.0 19.4 29 4.3 7.0 3.9 1 1 1 2 2 2 0 PT repeat FAM60A PF15396.6 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_3 - 3.2 7.7 11.1 3.9 7.4 11.1 1.0 1 0 0 1 1 1 0 Protein Family FAM60A DUF4554 PF15091.6 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_2 - 0.8 8.5 7.6 0.88 8.4 7.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) TM_helix PF05552.12 NODE_51027_length_357_cov_5.335404_g43119_i0forward_frame_2 - 4.9 7.2 8.3 12 6.0 3.0 3.3 2 1 1 3 3 3 0 Conserved TM helix Chi-conotoxin PF16981.5 NODE_51025_length_357_cov_9.891304_g43117_i0reverse_frame_2 - 0.2 11.9 0.3 2.8 8.2 0.1 2.4 3 0 0 3 3 3 0 chi-Conotoxin or t superfamily Mac-1 PF09028.10 NODE_51025_length_357_cov_9.891304_g43117_i0forward_frame_3 - 0.15 11.1 0.1 0.22 10.6 0.1 1.2 1 0 0 1 1 1 0 Mac 1 DUF2207 PF09972.9 NODE_51024_length_357_cov_11.885093_g43116_i0reverse_frame_2 - 2.6 6.7 6.6 2.7 6.7 6.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TraV PF09676.10 NODE_51024_length_357_cov_11.885093_g43116_i0forward_frame_3 - 0.29 12.1 4.7 0.37 11.8 4.7 1.1 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) NID PF07292.13 NODE_51020_length_357_cov_50.565217_g43112_i0reverse_frame_2 - 0.11 13.1 0.1 0.19 12.4 0.1 1.3 1 0 0 1 1 1 0 Nmi/IFP 35 domain (NID) p12I PF12233.8 NODE_51018_length_357_cov_54.909938_g43110_i0reverse_frame_2 - 6.7 7.3 9.2 4 8.0 6.5 1.9 1 1 1 2 2 2 0 Human adult T cell leukemia/lymphoma virus protein CbiQ PF02361.16 NODE_51017_length_357_cov_55.242236_g43109_i0forward_frame_3 - 0.057 13.0 0.1 0.077 12.6 0.1 1.3 1 0 0 1 1 1 0 Cobalt transport protein Pescadillo_N PF06732.11 NODE_51016_length_357_cov_58.953416_g43108_i0reverse_frame_3 - 0.012 15.2 0.1 0.016 14.8 0.1 1.1 1 0 0 1 1 1 0 Pescadillo N-terminus CDC14 PF08045.11 NODE_51016_length_357_cov_58.953416_g43108_i0forward_frame_2 - 0.17 10.9 0.1 0.23 10.5 0.1 1.1 1 0 0 1 1 1 0 Cell division control protein 14, SIN component Antifungal_pept PF11410.8 NODE_51015_length_357_cov_61.164596_g43107_i0forward_frame_2 - 0.89 9.5 7.9 0.3 11.0 3.9 2.1 2 0 0 2 2 2 0 Antifungal peptide Sel1 PF08238.12 NODE_51011_length_357_cov_73.024845_g43103_i0forward_frame_2 - 8.3e-05 23.1 0.1 0.44 11.3 0.0 2.5 2 0 0 2 2 2 2 Sel1 repeat MORN PF02493.20 NODE_51009_length_357_cov_78.052795_g43101_i0reverse_frame_2 - 7.3e-06 25.6 11.8 0.00015 21.5 2.4 4.3 4 0 0 4 4 4 2 MORN repeat RTA1 PF04479.13 NODE_51006_length_357_cov_85.757764_g43098_i0reverse_frame_3 - 0.092 12.3 5.8 0.1 12.2 5.8 1.1 1 0 0 1 1 1 0 RTA1 like protein Rav1p_C PF12234.8 NODE_51006_length_357_cov_85.757764_g43098_i0reverse_frame_2 - 0.0082 14.6 1.4 0.0088 14.5 1.4 1.0 1 0 0 1 1 1 1 RAVE protein 1 C terminal UNC-50 PF05216.13 NODE_50996_length_357_cov_124.077640_g43088_i0forward_frame_3 - 0.047 13.2 1.6 0.06 12.9 1.6 1.3 1 1 0 1 1 1 0 UNC-50 family KASH PF10541.9 NODE_50993_length_357_cov_186.701863_g43085_i0forward_frame_2 - 0.021 15.1 0.1 0.06 13.6 0.0 1.7 2 0 0 2 2 2 0 Nuclear envelope localisation domain UreE_C PF05194.12 NODE_50992_length_357_cov_204.854037_g43084_i0forward_frame_3 - 0.016 15.6 0.2 0.021 15.3 0.2 1.2 1 0 0 1 1 1 0 UreE urease accessory protein, C-terminal domain YqgC PF17430.2 NODE_50992_length_357_cov_204.854037_g43084_i0forward_frame_2 - 0.034 14.2 1.1 0.062 13.4 1.1 1.5 1 0 0 1 1 1 0 Uncharacterized YqgC-like CitMHS PF03600.16 NODE_50991_length_357_cov_302.928571_g43083_i0forward_frame_2 - 0.13 11.4 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Citrate transporter Imm17 PF15562.6 NODE_50985_length_357_cov_9370.363354_g43078_i0forward_frame_2 - 0.079 12.8 0.1 0.079 12.8 0.1 1.6 2 0 0 2 2 2 0 Immunity protein 17 MFS_1 PF07690.16 ORF99997 - 0.015 14.3 0.0 0.015 14.3 0.0 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF2968 PF11180.8 ORF99725 - 0.065 12.9 4.3 0.23 11.1 4.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2968) Prefoldin_2 PF01920.20 ORF99725 - 0.1 12.6 16.2 5.9 6.9 12.9 2.6 1 1 1 2 2 2 0 Prefoldin subunit DAGAT PF03982.13 ORF99725 - 0.14 11.1 0.1 0.14 11.0 0.1 1.1 1 0 0 1 1 1 0 Diacylglycerol acyltransferase DUF1664 PF07889.12 ORF99725 - 0.25 11.4 8.3 0.79 9.8 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Prefoldin PF02996.17 ORF99725 - 0.29 11.0 10.8 0.055 13.4 2.1 2.3 1 1 0 2 2 2 0 Prefoldin subunit BLOC1_2 PF10046.9 ORF99725 - 0.33 11.3 11.1 0.21 11.9 1.4 2.6 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ParB PF08775.10 ORF99725 - 0.46 11.0 9.0 2.2 8.7 1.1 2.1 2 0 0 2 2 2 0 ParB family DivIC PF04977.15 ORF99725 - 0.7 9.7 10.7 0.93 9.3 0.6 2.6 2 1 1 3 3 3 0 Septum formation initiator PRKG1_interact PF15898.5 ORF99725 - 1.1 10.1 10.1 4.5 8.2 10.1 1.8 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain FlaC_arch PF05377.11 ORF99725 - 1.2 9.5 7.7 6.5 7.2 1.4 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) SlyX PF04102.12 ORF99725 - 1.5 9.5 7.7 0.99 10.1 0.4 3.1 1 1 1 3 3 3 0 SlyX DUF4446 PF14584.6 ORF99725 - 1.8 8.6 8.2 2.4 8.1 1.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) XhlA PF10779.9 ORF99725 - 2 8.7 10.3 6.7 7.0 2.8 2.4 2 0 0 2 2 2 0 Haemolysin XhlA ZapB PF06005.12 ORF99725 - 2.7 8.5 13.8 2.4e+02 2.3 12.9 2.5 1 1 1 2 2 2 0 Cell division protein ZapB DUF4407 PF14362.6 ORF99725 - 7.4 5.8 9.7 50 3.1 9.7 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF997 PF06196.12 ORF98991 - 0.045 13.8 0.2 0.069 13.2 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF997) Transglut_N PF00868.20 ORF9839 - 0.06 13.7 0.2 0.076 13.4 0.2 1.2 1 0 0 1 1 1 0 Transglutaminase family ASD2 PF08687.11 ORF97668 - 0.0071 15.9 5.1 0.0079 15.8 5.1 1.0 1 0 0 1 1 1 1 Apx/Shroom domain ASD2 ALMT PF11744.8 ORF97668 - 0.57 9.0 4.5 0.58 8.9 4.5 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Phage_int_SAM_2 PF12834.7 ORF95982 - 0.047 14.4 0.9 0.059 14.1 0.9 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal Snapin_Pallidin PF14712.6 ORF95982 - 0.066 13.6 10.3 0.59 10.6 1.4 3.0 1 1 2 3 3 3 0 Snapin/Pallidin DUF3524 PF12038.8 ORF94968 - 0.12 12.2 0.3 0.12 12.2 0.3 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3524) DUF3537 PF12056.8 ORF94927 - 0.069 12.0 2.2 0.076 11.8 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3537) DUF3524 PF12038.8 ORF94927 - 0.31 10.8 1.5 0.31 10.8 0.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3524) DAGK_prokar PF01219.19 ORF93698 - 0.083 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic diacylglycerol kinase Viral_DNA_bi PF02236.17 ORF92706 - 0.075 13.2 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Viral DNA-binding protein, all alpha domain DUF4706 PF15797.5 ORF92706 - 0.11 13.0 1.8 0.2 12.2 0.7 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4706) Rootletin PF15035.6 ORF92706 - 0.17 11.9 5.4 2.9 7.9 5.4 2.0 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion GBP_C PF02841.14 ORF92706 - 0.29 10.5 7.4 0.32 10.3 7.4 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain UreE_C PF05194.12 ORF92691 - 0.21 12.1 6.3 0.34 11.4 6.3 1.4 1 1 0 1 1 1 0 UreE urease accessory protein, C-terminal domain DUF927 PF06048.11 ORF9219 - 0.099 12.2 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF927) WAPL PF07814.13 ORF91812 - 0.046 12.5 0.0 0.055 12.3 0.0 1.0 1 0 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin zf-H2C2_5 PF13909.6 ORF89944 - 0.054 13.3 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 C2H2-type zinc-finger domain Ldr_toxin PF13940.6 ORF87490 - 3.9 7.6 5.9 10 6.3 5.9 1.6 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system DUF3265 PF11665.8 ORF87490 - 4.4 7.6 6.5 5.9 7.2 0.5 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3265) YrhC PF14143.6 ORF87432 - 0.11 12.6 0.0 0.88 9.7 0.0 2.0 2 0 0 2 2 2 0 YrhC-like protein Mito_carr PF00153.27 ORF85494 - 3.6e-20 71.7 0.1 4.2e-20 71.5 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein Laminin_G_3 PF13385.6 ORF85067 - 1e-06 29.0 0.0 1.4e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Lactamase_B PF00753.27 ORF85067 - 0.064 13.3 0.1 0.088 12.8 0.1 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily DAHP_synth_2 PF01474.16 ORF8499 - 0.018 13.6 0.5 0.021 13.4 0.5 1.0 1 0 0 1 1 1 0 Class-II DAHP synthetase family PRF PF06875.11 ORF8499 - 0.026 13.9 0.2 0.036 13.5 0.2 1.2 1 0 0 1 1 1 0 Plethodontid receptivity factor PRF DUF2070 PF09843.9 ORF84785 - 0.16 10.2 5.7 0.16 10.2 5.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Halogen_Hydrol PF10112.9 ORF84785 - 4 7.4 5.7 0.41 10.6 1.8 1.4 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF469 PF04320.14 ORF84701 - 1.5e-42 144.5 0.6 1.7e-42 144.3 0.6 1.0 1 0 0 1 1 1 1 Protein with unknown function (DUF469) Asp PF00026.23 ORF83968 - 0.0017 17.9 0.8 0.002 17.6 0.2 1.4 2 0 0 2 2 2 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF83968 - 0.012 15.9 0.1 0.019 15.2 0.1 1.4 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal SAP25 PF15476.6 ORF8377 - 0.011 15.4 0.5 0.013 15.1 0.5 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP25 Pan_kinase PF03309.14 ORF83663 - 0.00039 20.3 0.5 3.7 7.3 0.0 3.2 1 1 2 3 3 3 3 Type III pantothenate kinase Homeobox_KN PF05920.11 ORF80688 - 1.6e-11 43.9 0.7 2.8e-11 43.1 0.7 1.3 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF80688 - 5.2e-06 26.2 0.2 8.7e-06 25.5 0.2 1.4 1 0 0 1 1 1 1 Homeodomain Phage_int_SAM_2 PF12834.7 ORF80606 - 0.047 14.4 0.9 0.059 14.1 0.9 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal Snapin_Pallidin PF14712.6 ORF80606 - 0.066 13.6 10.3 0.59 10.6 1.4 3.0 1 1 2 3 3 3 0 Snapin/Pallidin zf-RING_2 PF13639.6 ORF80517 - 4.7e-12 46.0 9.7 6.5e-12 45.6 9.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF80517 - 2.1e-09 37.0 8.7 5e-09 35.8 8.7 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF80517 - 1.6e-06 28.3 9.5 4.5e-06 26.9 9.5 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF80517 - 1.1e-05 25.3 8.5 1.5e-05 24.8 8.5 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF80517 - 2.3e-05 24.2 7.2 3.1e-05 23.8 7.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF80517 - 4.1e-05 23.3 8.0 6.4e-05 22.7 8.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF80517 - 7.6e-05 22.6 5.9 0.00029 20.8 5.9 1.9 1 1 0 1 1 1 1 RING-type zinc-finger FANCL_C PF11793.8 ORF80517 - 0.00089 19.4 7.8 0.024 14.8 7.8 2.2 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 ORF80517 - 0.0022 17.8 10.0 0.0037 17.1 10.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF80517 - 0.0037 17.3 4.2 0.018 15.0 4.2 2.0 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3H2C3 PF17122.5 ORF80517 - 0.0074 16.3 1.2 0.0074 16.3 1.2 1.9 2 1 0 2 2 1 1 Zinc-finger Prok-RING_4 PF14447.6 ORF80517 - 0.0089 15.9 7.2 0.015 15.1 7.2 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Vps39_2 PF10367.9 ORF80517 - 0.013 15.9 2.5 0.11 13.0 1.2 2.1 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 RINGv PF12906.7 ORF80517 - 0.017 15.2 8.5 0.033 14.3 8.5 1.5 1 0 0 1 1 1 0 RING-variant domain Prok-RING_1 PF14446.6 ORF80517 - 0.047 13.6 7.2 0.34 10.9 2.7 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Baculo_RING PF05883.11 ORF80517 - 0.087 12.8 0.9 0.11 12.4 0.9 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Zn_ribbon_17 PF17120.5 ORF80517 - 0.099 12.3 7.3 0.28 10.8 7.2 1.8 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type zf-Di19 PF05605.12 ORF80517 - 3.3 8.1 7.8 34 4.8 7.8 2.2 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Pkinase PF00069.25 ORF76661 - 9.6e-16 57.9 0.0 1.1e-15 57.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF76661 - 1.3e-08 34.5 0.0 1.6e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase AAA PF00004.29 ORF76113 - 3.4e-11 43.7 0.0 3.7e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Beta_protein PF14350.6 ORF76113 - 0.012 15.1 0.0 0.014 14.8 0.0 1.0 1 0 0 1 1 1 0 Beta protein DUF5584 PF17822.1 ORF76085 - 0.0054 16.2 0.0 0.0067 15.9 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5584) Brr6_like_C_C PF10104.9 ORF76071 - 1.7e-24 86.1 2.5 2.1e-24 85.8 2.5 1.0 1 0 0 1 1 1 1 Di-sulfide bridge nucleocytoplasmic transport domain Baculo_ODV-E27 PF05314.11 ORF75786 - 0.0051 16.0 1.1 0.0065 15.7 1.1 1.2 1 0 0 1 1 1 1 Baculovirus occlusion-derived virus envelope protein EC27 Ribosomal_L21e PF01157.18 ORF75786 - 0.055 13.3 0.6 0.23 11.3 0.1 1.9 1 1 1 2 2 2 0 Ribosomal protein L21e SPT2 PF08243.11 ORF75786 - 0.24 12.0 3.4 0.28 11.7 3.1 1.3 1 1 0 1 1 1 0 SPT2 chromatin protein PPR_2 PF13041.6 ORF75185 - 4.9e-05 23.4 0.0 8.1e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 PPR repeat family PPR PF01535.20 ORF75185 - 0.00092 19.3 0.0 0.0025 18.0 0.0 1.8 2 0 0 2 2 2 1 PPR repeat PPR_3 PF13812.6 ORF75185 - 0.002 18.2 0.0 0.71 10.0 0.0 2.1 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF75185 - 0.017 14.9 0.0 0.026 14.2 0.0 1.4 1 0 0 1 1 1 0 PPR repeat DUF4337 PF14235.6 ORF75036 - 0.031 14.4 0.4 0.037 14.1 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Eaf7 PF07904.13 ORF75036 - 0.047 14.1 0.9 0.074 13.4 0.9 1.5 1 1 0 1 1 1 0 Chromatin modification-related protein EAF7 CSD PF00313.22 ORF73049 - 1.4e-06 28.0 0.0 3.4e-06 26.8 0.0 1.5 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF73049 - 0.0016 18.1 0.1 0.003 17.2 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF2382 PF09557.10 ORF72009 - 0.087 13.1 2.0 1.2 9.4 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2382) SIP1 PF04938.12 ORF71334 - 0.099 12.3 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) Antifungal_pept PF11410.8 ORF71334 - 0.85 9.6 5.7 0.23 11.4 2.0 1.9 1 1 1 2 2 2 0 Antifungal peptide DUF4355 PF14265.6 ORF70252 - 0.37 11.0 16.8 0.54 10.5 16.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4355) CemA PF03040.14 ORF70252 - 3.1 7.7 6.8 4 7.3 6.8 1.2 1 0 0 1 1 1 0 CemA family TMA7 PF09072.10 ORF70252 - 3.9 8.4 7.3 2 9.3 4.4 2.0 1 1 1 2 2 2 0 Translation machinery associated TMA7 AAA_23 PF13476.6 ORF70252 - 6.5 7.2 15.8 8.4 6.8 15.8 1.1 1 0 0 1 1 1 0 AAA domain Asp PF00026.23 ORF69769 - 0.00074 19.0 0.0 0.00077 19.0 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF4350 PF14258.6 ORF69769 - 0.18 12.3 0.0 0.3 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) Far-17a_AIG1 PF04750.14 ORF69223 - 0.073 12.4 5.6 0.092 12.0 5.6 1.2 1 1 0 1 1 1 0 FAR-17a/AIG1-like protein zinc_ribbon_15 PF17032.5 ORF69014 - 0.67 10.7 3.9 1.3 9.9 3.9 1.4 1 1 0 1 1 1 0 zinc-ribbon family Glyco_transf_7C PF02709.14 ORF68394 - 0.0022 17.6 0.3 0.0039 16.8 0.3 1.4 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase SDA1 PF05285.12 ORF68288 - 0.051 13.0 27.4 0.052 13.0 27.4 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF68288 - 0.63 8.2 27.2 0.64 8.2 27.2 1.0 1 0 0 1 1 1 0 Nop14-like family NOA36 PF06524.12 ORF68288 - 0.69 9.2 25.6 0.89 8.8 25.6 1.2 1 0 0 1 1 1 0 NOA36 protein PTPRCAP PF15713.5 ORF68288 - 0.69 10.2 16.8 0.71 10.1 15.2 1.9 2 0 0 2 2 2 0 Protein tyrosine phosphatase receptor type C-associated RNA_pol_Rpc4 PF05132.14 ORF68288 - 0.72 10.3 5.1 0.78 10.2 5.1 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF913 PF06025.12 ORF68288 - 1.4 7.8 6.3 1.3 7.9 6.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) PPP4R2 PF09184.11 ORF68288 - 2.5 7.6 22.2 2.6 7.6 22.2 1.2 1 0 0 1 1 1 0 PPP4R2 V_ATPase_I PF01496.19 ORF68288 - 2.8 5.7 8.8 3 5.7 8.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CDC45 PF02724.14 ORF68288 - 3 6.0 22.6 3.3 5.9 22.6 1.1 1 0 0 1 1 1 0 CDC45-like protein Zip PF02535.22 ORF68288 - 3.1 6.9 5.9 3.1 6.9 5.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter NPR3 PF03666.13 ORF68288 - 4 6.1 13.7 4.8 5.9 13.7 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Afi1 PF07792.12 ORF68288 - 4 7.9 16.2 6 7.3 16.2 1.3 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking Connexin PF00029.19 ORF68288 - 5.5 6.7 4.7 5.7 6.6 4.7 1.2 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 ORF68288 - 7.1 5.3 8.2 6.6 5.4 8.2 1.1 1 0 0 1 1 1 0 Presenilin LPD15 PF18828.1 ORF68171 - 0.045 13.6 0.4 0.083 12.8 0.3 1.6 1 1 0 1 1 1 0 Large polyvalent-protein-associated domain 15 Pkinase PF00069.25 ORF67956 - 1.4e-31 109.8 0.1 1.5e-31 109.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67956 - 4.9e-17 62.1 0.0 6.1e-17 61.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF67956 - 3.3e-06 26.6 0.0 2e-05 24.1 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF67956 - 0.0028 17.1 0.1 0.0034 16.8 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF67956 - 0.063 12.1 0.0 0.071 11.9 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase zf-Mss51 PF13824.6 ORF67956 - 0.064 13.4 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 FTA2 PF13095.6 ORF67956 - 0.082 12.5 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF67956 - 0.19 11.6 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family ApoO PF09769.9 ORF67368 - 0.053 13.5 4.2 0.077 13.0 4.2 1.5 1 1 0 1 1 1 0 Apolipoprotein O Neur_chan_memb PF02932.16 ORF67368 - 0.097 12.7 10.0 0.11 12.5 10.0 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4778 PF16008.5 ORF67368 - 0.11 12.6 7.7 0.12 12.4 7.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) DUF778 PF05608.12 ORF67368 - 0.23 11.8 6.4 0.27 11.6 6.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF778) GET2 PF08690.10 ORF67368 - 0.38 10.4 12.1 0.46 10.1 12.1 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 O-antigen_lig PF13425.6 ORF67368 - 1.3 7.7 5.0 1.5 7.5 5.0 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein RR_TM4-6 PF06459.12 ORF67368 - 2.3 8.0 11.3 2.4 7.9 11.3 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF1980 PF09323.10 ORF67368 - 5.2 6.9 7.5 6.3 6.7 7.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Serinc PF03348.15 ORF67368 - 6.6 5.5 5.0 6.6 5.5 5.0 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) Presenilin PF01080.17 ORF67368 - 8.9 5.0 12.8 9.8 4.8 12.8 1.0 1 0 0 1 1 1 0 Presenilin Coilin_N PF15862.5 ORF67368 - 9.3 6.1 12.6 13 5.6 12.6 1.3 1 0 0 1 1 1 0 Coilin N-terminus SAP25 PF15476.6 ORF66997 - 0.011 15.4 0.5 0.013 15.1 0.5 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP25 DUF4337 PF14235.6 ORF66729 - 0.024 14.8 1.7 0.034 14.3 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) LptF_LptG PF03739.14 ORF66631 - 3.6e-21 75.4 2.4 4.2e-21 75.2 2.4 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG DUF4870 PF09685.10 ORF66631 - 0.18 11.9 4.3 0.64 10.2 4.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4870) DUF4191 PF13829.6 ORF66236 - 0.056 12.8 0.0 0.069 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Sid-5 PF17204.3 ORF66236 - 1.5 9.1 4.1 37 4.6 1.8 2.4 1 1 1 2 2 2 0 Sid-5 family DUF2207 PF09972.9 ORF65992 - 0.018 13.9 0.0 0.02 13.7 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CrgA PF06781.12 ORF65992 - 0.018 15.1 0.1 0.024 14.7 0.1 1.2 1 0 0 1 1 1 0 Cell division protein CrgA DUF4731 PF15875.5 ORF65992 - 0.82 9.9 4.0 0.99 9.6 0.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4731) TusA PF01206.17 ORF65395 - 0.091 12.6 0.1 1.2 9.0 0.0 2.1 2 0 0 2 2 2 0 Sulfurtransferase TusA Endonuc_Holl PF10107.9 ORF65395 - 1 9.2 5.6 0.66 9.8 3.7 1.6 1 1 0 1 1 1 0 Endonuclease related to archaeal Holliday junction resolvase 3HCDH_N PF02737.18 ORF65308 - 0.22 11.4 1.8 0.25 11.2 1.8 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pkinase PF00069.25 ORF64936 - 2.3e-21 76.4 0.0 2.5e-21 76.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF64936 - 1.5e-11 44.1 0.0 1.7e-11 43.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Sun2_CC2 PF18580.1 ORF64936 - 0.028 14.6 0.4 0.09 13.0 0.1 1.8 2 0 0 2 2 2 0 SUN2 coiled coil domain 2 FTA2 PF13095.6 ORF64936 - 0.039 13.6 0.3 0.052 13.2 0.3 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 TTL PF03133.15 ORF64445 - 1.3e-13 50.8 0.0 1.4e-13 50.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Beta-lactamase2 PF13354.6 ORF64445 - 0.043 13.4 0.0 0.043 13.4 0.0 1.0 1 0 0 1 1 1 0 Beta-lactamase enzyme family NusA_N PF08529.11 ORF64445 - 0.078 13.3 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 NusA N-terminal domain PsbY PF06298.11 ORF63777 - 1.8e-07 30.9 6.4 1.8e-07 30.9 6.4 3.2 4 0 0 4 4 4 1 Photosystem II protein Y (PsbY) MMgT PF10270.9 ORF63360 - 2.6e-10 40.5 0.0 2.8e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Membrane magnesium transporter Peripla_BP_1 PF00532.21 ORF63332 - 2.8e-29 102.4 0.0 3.1e-29 102.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family DUF2063 PF09836.9 ORF63212 - 0.0084 16.3 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 1 Putative DNA-binding domain DUF5050 PF16472.5 ORF63212 - 0.027 13.7 0.2 0.034 13.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5050) RRF PF01765.19 ORF60724 - 1.3e-32 113.0 3.7 1.5e-32 112.8 3.7 1.0 1 0 0 1 1 1 1 Ribosome recycling factor PGPGW PF09656.10 ORF60055 - 9.3 5.9 11.1 9.5 5.8 0.6 3.1 3 0 0 3 3 3 0 Putative transmembrane protein (PGPGW) DUF1390 PF07150.11 ORF58154 - 0.00014 21.7 1.4 0.00016 21.5 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1390) SDA1 PF05285.12 ORF57835 - 0.025 14.0 25.9 0.029 13.8 25.9 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF57835 - 0.39 8.9 26.0 0.4 8.8 26.0 1.0 1 0 0 1 1 1 0 Nop14-like family PTPRCAP PF15713.5 ORF57835 - 0.46 10.8 15.7 0.48 10.7 14.1 1.9 2 0 0 2 2 2 0 Protein tyrosine phosphatase receptor type C-associated RNA_pol_Rpc4 PF05132.14 ORF57835 - 0.6 10.5 4.6 0.72 10.3 4.6 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 NOA36 PF06524.12 ORF57835 - 0.78 9.0 25.7 0.97 8.7 25.7 1.2 1 0 0 1 1 1 0 NOA36 protein DUF913 PF06025.12 ORF57835 - 0.83 8.6 5.3 0.86 8.5 5.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) V_ATPase_I PF01496.19 ORF57835 - 1.3 6.8 7.9 1.4 6.8 7.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NPR3 PF03666.13 ORF57835 - 1.7 7.3 12.4 2.1 7.1 12.4 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CDC45 PF02724.14 ORF57835 - 1.8 6.8 21.3 1.9 6.7 21.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Afi1 PF07792.12 ORF57835 - 1.9 9.0 15.3 2.8 8.4 15.3 1.2 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking PPP4R2 PF09184.11 ORF57835 - 2.1 7.9 21.7 2.3 7.8 21.7 1.1 1 0 0 1 1 1 0 PPP4R2 Connexin PF00029.19 ORF57835 - 3.3 7.4 3.8 3.8 7.2 3.8 1.2 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 ORF57835 - 3.4 6.3 6.9 3.1 6.5 6.9 1.1 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 ORF57835 - 3.9 6.6 5.8 3.8 6.7 5.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Spc7 PF08317.11 ORF57203 - 0.00032 19.7 10.0 0.00034 19.6 10.0 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF57203 - 0.00047 20.4 8.6 0.00053 20.2 8.6 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 FliD_C PF07195.12 ORF57203 - 0.0006 19.3 4.1 0.005 16.3 0.7 2.0 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus YbfN PF13982.6 ORF57203 - 0.001 19.3 0.6 0.0031 17.8 0.1 1.9 1 1 1 2 2 2 1 YbfN-like lipoprotein BRE1 PF08647.11 ORF57203 - 0.0015 18.6 5.5 0.0015 18.6 5.5 1.8 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase LCD1 PF09798.9 ORF57203 - 0.0023 16.5 8.8 0.0028 16.2 8.8 1.0 1 0 0 1 1 1 1 DNA damage checkpoint protein DUF773 PF05600.12 ORF57203 - 0.0056 15.5 5.4 0.0063 15.3 5.4 1.0 1 0 0 1 1 1 1 CDK5 regulatory subunit-associated protein 3 DUF4164 PF13747.6 ORF57203 - 0.011 16.0 1.6 0.014 15.6 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) DUF4200 PF13863.6 ORF57203 - 0.02 15.3 6.4 0.02 15.3 6.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Bacillus_HBL PF05791.11 ORF57203 - 0.02 14.8 7.1 0.029 14.2 7.1 1.4 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) OmpH PF03938.14 ORF57203 - 0.026 14.8 6.0 0.032 14.6 6.0 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF3450 PF11932.8 ORF57203 - 0.034 13.4 5.6 0.04 13.2 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ADIP PF11559.8 ORF57203 - 0.036 14.1 10.7 0.48 10.5 10.7 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding FlaC_arch PF05377.11 ORF57203 - 0.052 13.9 1.2 0.052 13.9 1.2 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF643 PF04867.12 ORF57203 - 0.057 14.0 3.7 0.095 13.3 3.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF643) DUF1974 PF09317.11 ORF57203 - 0.09 12.3 2.2 0.11 12.1 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) LCIB_C_CA PF18599.1 ORF57203 - 0.14 11.4 1.7 0.17 11.2 1.7 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases ABC_tran_CTD PF16326.5 ORF57203 - 0.18 12.0 9.6 0.12 12.6 6.7 2.0 1 1 2 3 3 3 0 ABC transporter C-terminal domain YabA PF06156.13 ORF57203 - 0.24 12.0 5.4 0.39 11.4 5.4 1.4 1 1 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF57203 - 0.33 8.8 6.1 0.33 8.8 6.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family APG6_N PF17675.1 ORF57203 - 0.44 11.1 11.6 1.6 9.3 11.6 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region TMPIT PF07851.13 ORF57203 - 0.7 9.1 5.9 0.81 8.9 5.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein BST2 PF16716.5 ORF57203 - 0.92 10.1 8.8 0.1 13.2 2.9 2.0 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF5082 PF16888.5 ORF56822 - 0.0025 18.1 2.6 0.0025 18.1 2.6 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF5082) Fib_alpha PF08702.10 ORF56822 - 0.0058 16.8 7.5 0.0087 16.2 7.5 1.3 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family FDX-ACB PF03147.14 ORF56822 - 0.011 16.1 0.9 0.018 15.5 0.9 1.4 1 1 0 1 1 1 0 Ferredoxin-fold anticodon binding domain Prefoldin_2 PF01920.20 ORF56822 - 0.025 14.5 9.6 0.075 13.0 3.6 2.5 1 1 0 2 2 2 0 Prefoldin subunit FlaC_arch PF05377.11 ORF56822 - 0.026 14.9 5.5 0.057 13.8 1.3 2.5 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Exonuc_VII_L PF02601.15 ORF56822 - 0.035 13.7 8.1 0.037 13.6 8.1 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Apolipoprotein PF01442.18 ORF56822 - 0.046 13.6 4.5 0.078 12.8 4.5 1.4 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain PIN_8 PF18476.1 ORF56822 - 0.19 11.6 4.5 0.23 11.3 4.5 1.2 1 0 0 1 1 1 0 PIN like domain DUF1664 PF07889.12 ORF56822 - 0.34 10.9 5.6 0.57 10.2 2.2 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Mitofilin PF09731.9 ORF56822 - 0.4 9.5 9.5 0.45 9.3 9.5 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein GrpE PF01025.19 ORF56822 - 0.42 10.3 6.5 0.2 11.3 2.2 1.9 1 1 1 2 2 2 0 GrpE DUF745 PF05335.13 ORF56822 - 0.52 10.0 4.5 0.29 10.8 2.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF745) SlyX PF04102.12 ORF56822 - 0.54 10.9 8.0 0.87 10.3 4.5 2.5 2 1 0 2 2 2 0 SlyX DUF641 PF04859.12 ORF56822 - 2.8 8.3 7.5 1.7 9.0 2.4 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF2897 PF11446.8 ORF5677 - 0.028 14.3 1.6 0.028 14.3 1.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) EamA PF00892.20 ORF5496 - 0.00035 20.8 1.9 0.00039 20.6 1.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family EXS PF03124.14 ORF54788 - 3.1e-15 56.3 3.8 3.6e-15 56.1 3.8 1.1 1 0 0 1 1 1 1 EXS family Cyclin PF08613.11 ORF54686 - 1e-08 35.7 0.9 1.2e-08 35.5 0.9 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF54686 - 1.1e-05 25.1 0.2 1.4e-05 24.9 0.2 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain PsbY PF06298.11 ORF54103 - 1.8e-07 30.9 6.4 1.8e-07 30.9 6.4 3.2 4 0 0 4 4 4 1 Photosystem II protein Y (PsbY) DEFB136 PF17333.2 ORF54103 - 0.14 12.1 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Beta defensin 136 Pkinase PF00069.25 ORF53918 - 2.3e-21 76.4 0.0 2.5e-21 76.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF53918 - 1.5e-11 44.1 0.0 1.7e-11 43.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Sun2_CC2 PF18580.1 ORF53918 - 0.028 14.6 0.4 0.09 13.0 0.1 1.8 2 0 0 2 2 2 0 SUN2 coiled coil domain 2 FTA2 PF13095.6 ORF53918 - 0.039 13.6 0.3 0.052 13.2 0.3 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 V-ATPase_G PF03179.15 ORF53200 - 1.1e-23 83.7 14.8 1.3e-23 83.5 14.8 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit LAX PF15681.5 ORF53200 - 0.016 14.1 0.4 0.016 14.0 0.4 1.1 1 0 0 1 1 1 0 Lymphocyte activation family X ATP-synt_B PF00430.18 ORF53200 - 0.19 11.8 16.1 0.17 12.0 10.7 2.0 1 1 0 2 2 2 0 ATP synthase B/B' CF(0) Aldedh PF00171.22 ORF53200 - 0.24 9.9 2.0 0.27 9.7 2.0 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family DUF2344 PF10105.9 ORF53200 - 0.26 11.1 3.3 0.29 10.9 3.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) Pes-10 PF07149.11 ORF53200 - 0.37 9.8 10.9 0.42 9.6 10.9 1.1 1 0 0 1 1 1 0 Pes-10 DUF3552 PF12072.8 ORF53200 - 0.67 9.3 18.0 3.1 7.2 18.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF932 PF06067.11 ORF53200 - 0.84 9.4 4.0 1 9.1 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF932) FAM60A PF15396.6 ORF53200 - 2.7 7.9 6.3 3.3 7.7 6.3 1.0 1 0 0 1 1 1 0 Protein Family FAM60A UPF0242 PF06785.11 ORF53200 - 9.7 6.2 13.1 10 6.1 13.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TAXi_N PF14543.6 ORF53183 - 0.0052 17.0 0.1 0.0062 16.8 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Sugar_tr PF00083.24 ORF52599 - 4.8e-07 29.0 4.8 5.5e-07 28.8 4.8 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter SoxZ PF08770.11 ORF52599 - 0.076 12.8 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Sulphur oxidation protein SoxZ Actin PF00022.19 ORF51997 - 2.7 6.5 8.0 2.6 6.5 8.0 1.2 1 0 0 1 1 1 0 Actin FHIPEP PF00771.20 ORF51997 - 4.7 5.6 11.6 5.1 5.4 11.6 1.0 1 0 0 1 1 1 0 FHIPEP family DUF1644 PF07800.12 ORF51997 - 8.4 6.4 10.4 12 6.0 10.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) SH3-RhoG_link PF16609.5 ORF51841 - 0.11 12.3 1.0 0.13 12.0 1.0 1.1 1 0 0 1 1 1 0 SH3-RhoGEF linking unstructured region DUF1977 PF09320.11 ORF51122 - 4.5e-11 42.9 5.5 6.6e-11 42.4 5.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF1977) ComGF PF15980.5 ORF51122 - 0.032 14.6 1.5 0.05 14.0 1.2 1.7 1 1 0 1 1 1 0 Putative Competence protein ComGF XPC-binding PF09280.11 ORF50756 - 0.026 14.2 1.5 0.052 13.3 1.5 1.4 1 0 0 1 1 1 0 XPC-binding domain Asp PF00026.23 ORF50141 - 0.00053 19.5 0.0 0.00055 19.4 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF4350 PF14258.6 ORF50141 - 0.18 12.2 0.0 0.31 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) DUF2138 PF09909.9 ORF49778 - 0.06 11.7 1.3 0.066 11.5 1.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2138) EF-hand_1 PF00036.32 ORF49706 - 0.00018 20.8 0.4 0.002 17.6 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF49706 - 0.00066 19.4 0.1 0.0037 17.1 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF49706 - 0.0038 16.7 0.7 0.011 15.2 0.2 2.0 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF49706 - 0.0075 16.7 0.1 0.016 15.7 0.1 1.6 1 1 0 1 1 1 1 EF-hand domain pair SMG1_N PF17229.2 ORF49706 - 0.13 12.9 0.2 0.19 12.4 0.2 1.3 1 0 0 1 1 1 0 Serine/threonine-protein kinase SMG1 N-terminal Snapin_Pallidin PF14712.6 ORF49561 - 0.046 14.1 9.5 0.55 10.7 1.3 3.0 1 1 2 3 3 3 0 Snapin/Pallidin Phage_int_SAM_2 PF12834.7 ORF49561 - 0.046 14.4 0.8 0.059 14.1 0.8 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal Ribosomal_S2 PF00318.20 ORF48485 - 0.065 12.4 4.4 0.084 12.1 4.4 1.2 1 0 0 1 1 1 0 Ribosomal protein S2 TetR_C_23 PF17931.1 ORF48485 - 0.11 12.7 3.2 0.092 12.9 0.6 1.8 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF4220 PF13968.6 ORF48485 - 0.22 10.9 0.5 0.23 10.8 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) CSN7a_helixI PF18392.1 ORF48485 - 1.3 9.0 5.3 3.5 7.6 5.3 1.8 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain HTH_15 PF12324.8 ORF4772 - 0.043 13.8 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase DSHCT PF08148.12 ORF4772 - 0.044 13.5 0.0 0.051 13.2 0.0 1.1 1 0 0 1 1 1 0 DSHCT (NUC185) domain PfUIS3 PF11567.8 ORF4772 - 0.07 13.5 0.0 0.091 13.1 0.0 1.2 1 0 0 1 1 1 0 Plasmodium falciparum UIS3 membrane protein V-ATPase_H_N PF03224.14 ORF4772 - 0.088 12.1 0.2 0.1 11.8 0.2 1.1 1 0 0 1 1 1 0 V-ATPase subunit H EF-hand_7 PF13499.6 ORF47677 - 1.6e-13 50.9 10.0 3.1e-10 40.3 3.7 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF47677 - 2e-12 45.7 5.8 5.2e-06 25.6 0.3 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF47677 - 1.3e-10 40.3 7.2 1.5e-05 24.5 1.4 3.4 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF47677 - 3.5e-08 32.6 5.3 0.00097 18.5 0.3 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF47677 - 3.7e-06 26.7 7.0 0.00026 20.8 0.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF47677 - 9.5e-05 22.7 1.0 0.0083 16.4 0.6 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region LXG PF04740.12 ORF47677 - 0.0014 18.3 0.5 0.0022 17.8 0.5 1.3 1 0 0 1 1 1 1 LXG domain of WXG superfamily NitrOD5 PF11537.8 ORF47677 - 0.007 16.5 1.0 0.024 14.8 0.3 2.1 1 1 1 2 2 2 1 Nitrosopumilus output domain 5 EF-hand_10 PF14788.6 ORF47677 - 0.016 15.1 3.8 0.84 9.5 0.4 2.5 2 1 0 2 2 2 0 EF hand p25-alpha PF05517.12 ORF47677 - 0.034 14.3 1.6 0.073 13.2 0.7 1.9 1 1 1 2 2 2 0 p25-alpha Glycos_trans_3N PF02885.17 ORF47677 - 0.037 13.9 0.2 4.1 7.3 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain HTH_57 PF18679.1 ORF47677 - 0.17 12.2 0.6 1.9 8.8 0.1 2.0 1 1 1 2 2 2 0 ThcOx helix turn helix domain Polysacc_syn_2C PF08485.10 ORF47677 - 0.46 10.2 3.7 8.9 6.1 0.1 2.8 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal Med22 PF06179.12 ORF47294 - 4.2e-05 23.7 2.0 7.1e-05 23.0 2.0 1.5 1 1 0 1 1 1 1 Surfeit locus protein 5 subunit 22 of Mediator complex APG6_N PF17675.1 ORF47294 - 0.044 14.3 2.6 0.084 13.4 2.6 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region CK2S PF15011.6 ORF47294 - 0.045 13.7 2.1 0.063 13.2 1.2 1.7 1 1 1 2 2 2 0 Casein Kinase 2 substrate Kinocilin PF15033.6 ORF47273 - 0.093 12.4 0.5 0.13 11.9 0.5 1.2 1 0 0 1 1 1 0 Kinocilin protein MotA_ExbB PF01618.16 ORF47273 - 1.1 9.0 0.1 1.1 9.0 0.1 2.3 3 0 0 3 3 3 0 MotA/TolQ/ExbB proton channel family Snapin_Pallidin PF14712.6 ORF46832 - 0.025 15.0 8.2 0.43 11.0 0.5 2.8 1 1 1 2 2 2 0 Snapin/Pallidin Phage_int_SAM_2 PF12834.7 ORF46832 - 0.05 14.3 1.0 0.064 14.0 1.0 1.2 1 0 0 1 1 1 0 Phage integrase, N-terminal Phage_GPD PF05954.11 ORF45794 - 1.8e-16 60.3 0.1 2.3e-16 60.0 0.1 1.1 1 0 0 1 1 1 1 Phage late control gene D protein (GPD) Glyco_transf_88 PF16849.5 ORF44897 - 0.13 11.1 0.0 0.15 11.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 88 SUI1 PF01253.22 ORF44789 - 1.5e-20 73.5 0.3 2.7e-20 72.7 0.1 1.5 1 1 1 2 2 2 1 Translation initiation factor SUI1 Img2 PF05046.14 ORF44789 - 0.0059 16.9 0.1 0.0077 16.5 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) AnfG_VnfG PF03139.15 ORF44789 - 0.052 13.6 0.2 0.066 13.3 0.2 1.3 1 0 0 1 1 1 0 Vanadium/alternative nitrogenase delta subunit Pkinase PF00069.25 ORF43350 - 2.3e-21 76.4 0.0 2.5e-21 76.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF43350 - 1.5e-11 44.1 0.0 1.7e-11 43.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Sun2_CC2 PF18580.1 ORF43350 - 0.028 14.6 0.4 0.09 13.0 0.1 1.8 2 0 0 2 2 2 0 SUN2 coiled coil domain 2 FTA2 PF13095.6 ORF43350 - 0.039 13.6 0.3 0.052 13.2 0.3 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 SLY PF12485.8 ORF43099 - 0.43 11.3 5.5 0.62 10.8 5.5 1.2 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein Act-Frag_cataly PF09192.10 ORF42399 - 2.9e-08 33.5 0.0 3.1e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 Actin-fragmin kinase, catalytic MMgT PF10270.9 ORF41428 - 2.6e-10 40.5 0.0 2.8e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Membrane magnesium transporter Spc7 PF08317.11 ORF40686 - 0.00032 19.7 10.0 0.00034 19.6 10.0 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF40686 - 0.00047 20.4 8.6 0.00053 20.2 8.6 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 FliD_C PF07195.12 ORF40686 - 0.0006 19.3 4.1 0.005 16.3 0.7 2.0 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus YbfN PF13982.6 ORF40686 - 0.001 19.3 0.6 0.0031 17.8 0.1 1.9 1 1 1 2 2 2 1 YbfN-like lipoprotein BRE1 PF08647.11 ORF40686 - 0.0015 18.6 5.5 0.0015 18.6 5.5 1.8 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase LCD1 PF09798.9 ORF40686 - 0.0023 16.5 8.8 0.0028 16.2 8.8 1.0 1 0 0 1 1 1 1 DNA damage checkpoint protein DUF773 PF05600.12 ORF40686 - 0.0056 15.5 5.4 0.0063 15.3 5.4 1.0 1 0 0 1 1 1 1 CDK5 regulatory subunit-associated protein 3 DUF4164 PF13747.6 ORF40686 - 0.011 16.0 1.6 0.014 15.6 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) DUF4200 PF13863.6 ORF40686 - 0.02 15.3 6.4 0.02 15.3 6.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Bacillus_HBL PF05791.11 ORF40686 - 0.02 14.8 7.1 0.029 14.2 7.1 1.4 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) OmpH PF03938.14 ORF40686 - 0.026 14.8 6.0 0.032 14.6 6.0 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF3450 PF11932.8 ORF40686 - 0.034 13.4 5.6 0.04 13.2 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ADIP PF11559.8 ORF40686 - 0.036 14.1 10.7 0.48 10.5 10.7 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding FlaC_arch PF05377.11 ORF40686 - 0.052 13.9 1.2 0.052 13.9 1.2 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF643 PF04867.12 ORF40686 - 0.057 14.0 3.7 0.095 13.3 3.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF643) DUF1974 PF09317.11 ORF40686 - 0.09 12.3 2.2 0.11 12.1 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) LCIB_C_CA PF18599.1 ORF40686 - 0.14 11.4 1.7 0.17 11.2 1.7 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases ABC_tran_CTD PF16326.5 ORF40686 - 0.18 12.0 9.6 0.12 12.6 6.7 2.0 1 1 2 3 3 3 0 ABC transporter C-terminal domain YabA PF06156.13 ORF40686 - 0.24 12.0 5.4 0.39 11.4 5.4 1.4 1 1 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF40686 - 0.33 8.8 6.1 0.33 8.8 6.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family APG6_N PF17675.1 ORF40686 - 0.44 11.1 11.6 1.6 9.3 11.6 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region TMPIT PF07851.13 ORF40686 - 0.7 9.1 5.9 0.81 8.9 5.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein BST2 PF16716.5 ORF40686 - 0.92 10.1 8.8 0.1 13.2 2.9 2.0 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Asp PF00026.23 ORF40276 - 3.5e-07 29.9 0.0 3.8e-07 29.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Ras PF00071.22 ORF39870 - 1.2e-12 47.7 0.3 2e-12 47.0 0.3 1.4 1 0 0 1 1 1 1 Ras family TAXi_N PF14543.6 ORF39738 - 0.0052 17.0 0.1 0.0062 16.8 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal NRBF2 PF08961.10 ORF39221 - 0.0096 15.5 0.4 0.0098 15.5 0.4 1.2 1 0 0 1 1 1 1 Nuclear receptor-binding factor 2, autophagy regulator HAUS6_N PF14661.6 ORF39221 - 0.039 13.5 0.8 0.041 13.5 0.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Synaptobrevin PF00957.21 ORF39221 - 0.085 12.7 2.5 0.13 12.1 0.7 2.0 1 1 1 2 2 2 0 Synaptobrevin Evr1_Alr PF04777.13 ORF38426 - 3.2e-14 53.2 1.6 4.5e-14 52.7 1.6 1.2 1 0 0 1 1 1 1 Erv1 / Alr family cIII PF08134.11 ORF38426 - 0.2 11.5 0.2 0.45 10.3 0.2 1.6 1 0 0 1 1 1 0 cIII protein family Trehalase_Ca-bi PF07492.11 ORF38319 - 0.068 12.9 0.1 0.16 11.8 0.1 1.6 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain MMgT PF10270.9 ORF36175 - 2.6e-10 40.5 0.0 2.8e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Membrane magnesium transporter ArfGap PF01412.18 ORF36161 - 0.041 14.0 0.0 0.06 13.4 0.0 1.5 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf SprA-related PF12118.8 ORF34742 - 0.047 12.8 11.6 0.056 12.6 11.6 1.1 1 0 0 1 1 1 0 SprA-related family RRN3 PF05327.11 ORF34742 - 0.16 10.5 6.6 0.15 10.5 6.6 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 DNA_pol_phi PF04931.13 ORF34742 - 0.53 8.3 15.2 0.66 8.0 15.2 1.0 1 0 0 1 1 1 0 DNA polymerase phi Mem_trans PF03547.18 ORF34742 - 0.55 8.6 3.2 0.65 8.3 3.2 1.0 1 0 0 1 1 1 0 Membrane transport protein CDC45 PF02724.14 ORF34742 - 2.9 6.1 16.5 3.1 6.0 16.5 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4407 PF14362.6 ORF34742 - 6.1 6.1 10.0 7.5 5.8 10.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Vfa1 PF08432.10 ORF34742 - 7 6.9 15.5 8 6.8 15.5 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 BTV_NS2 PF04514.12 ORF34742 - 9.9 4.9 11.4 4.4 6.0 9.6 1.3 1 1 0 1 1 1 0 Bluetongue virus non-structural protein NS2 zf-LITAF-like PF10601.9 ORF34618 - 7.4e-13 48.6 21.4 9.4e-13 48.2 21.4 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF3239 PF11580.8 ORF34618 - 0.027 14.8 0.4 0.034 14.5 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3239) ArenaCapSnatch PF17296.2 ORF34618 - 0.14 11.6 0.6 0.17 11.3 0.6 1.1 1 0 0 1 1 1 0 Arenavirus cap snatching domain Sugar_tr PF00083.24 ORF34535 - 4.8e-07 29.0 4.8 5.5e-07 28.8 4.8 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter SoxZ PF08770.11 ORF34535 - 0.076 12.8 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Sulphur oxidation protein SoxZ Aldo_ket_red PF00248.21 ORF34405 - 6.2e-08 32.2 0.0 7.6e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family EF-hand_7 PF13499.6 ORF34116 - 1.6e-13 50.9 10.0 3.1e-10 40.3 3.7 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF34116 - 2e-12 45.7 5.8 5.2e-06 25.6 0.3 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF34116 - 1.3e-10 40.3 7.2 1.5e-05 24.5 1.4 3.4 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF34116 - 3.5e-08 32.6 5.3 0.00097 18.5 0.3 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF34116 - 3.7e-06 26.7 7.0 0.00026 20.8 0.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF34116 - 9.5e-05 22.7 1.0 0.0083 16.4 0.6 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region LXG PF04740.12 ORF34116 - 0.0014 18.3 0.5 0.0022 17.8 0.5 1.3 1 0 0 1 1 1 1 LXG domain of WXG superfamily NitrOD5 PF11537.8 ORF34116 - 0.007 16.5 1.0 0.024 14.8 0.3 2.1 1 1 1 2 2 2 1 Nitrosopumilus output domain 5 EF-hand_10 PF14788.6 ORF34116 - 0.016 15.1 3.8 0.84 9.5 0.4 2.5 2 1 0 2 2 2 0 EF hand p25-alpha PF05517.12 ORF34116 - 0.034 14.3 1.6 0.073 13.2 0.7 1.9 1 1 1 2 2 2 0 p25-alpha Glycos_trans_3N PF02885.17 ORF34116 - 0.037 13.9 0.2 4.1 7.3 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain HTH_57 PF18679.1 ORF34116 - 0.17 12.2 0.6 1.9 8.8 0.1 2.0 1 1 1 2 2 2 0 ThcOx helix turn helix domain Polysacc_syn_2C PF08485.10 ORF34116 - 0.46 10.2 3.7 8.9 6.1 0.1 2.8 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal Myotub-related PF06602.14 ORF33993 - 2.3e-25 89.3 0.9 2.5e-25 89.2 0.9 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain Pkinase PF00069.25 ORF32818 - 2.7e-27 95.8 3.0 2.9e-27 95.7 3.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF32818 - 6e-18 65.1 0.2 6.3e-18 65.0 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF32818 - 8e-06 25.3 0.0 8.9e-06 25.2 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 ORF32818 - 0.00016 21.2 0.0 0.00021 20.9 0.0 1.2 1 0 0 1 1 1 1 PhoP regulatory network protein YrbL APH PF01636.23 ORF32818 - 0.00043 20.3 0.0 0.00056 19.9 0.0 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family CRM1_repeat_2 PF18784.1 ORF32818 - 0.00073 19.1 0.1 0.0014 18.3 0.1 1.5 1 0 0 1 1 1 1 CRM1 / Exportin repeat 2 Pkinase_fungal PF17667.1 ORF32818 - 0.0016 17.3 0.1 0.0021 16.9 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF32818 - 0.0025 17.4 0.4 0.0027 17.3 0.4 1.1 1 0 0 1 1 1 1 RIO1 family Haspin_kinase PF12330.8 ORF32818 - 0.0026 16.8 0.1 0.0026 16.7 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain DUF1679 PF07914.11 ORF32818 - 0.011 14.6 0.0 0.017 14.0 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1679) SF3b10 PF07189.11 ORF32024 - 0.054 13.6 0.0 0.083 13.0 0.0 1.3 1 0 0 1 1 1 0 Splicing factor 3B subunit 10 (SF3b10) HTH_15 PF12324.8 ORF31091 - 0.043 13.8 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase DSHCT PF08148.12 ORF31091 - 0.044 13.5 0.0 0.051 13.2 0.0 1.1 1 0 0 1 1 1 0 DSHCT (NUC185) domain PfUIS3 PF11567.8 ORF31091 - 0.07 13.5 0.0 0.091 13.1 0.0 1.2 1 0 0 1 1 1 0 Plasmodium falciparum UIS3 membrane protein V-ATPase_H_N PF03224.14 ORF31091 - 0.088 12.1 0.2 0.1 11.8 0.2 1.1 1 0 0 1 1 1 0 V-ATPase subunit H TPR_14 PF13428.6 ORF30947 - 3.3e-07 30.6 6.4 0.0018 18.9 0.4 2.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF30947 - 2.8e-06 27.7 9.6 0.00038 20.9 3.8 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF30947 - 5.5e-06 26.1 8.0 0.0081 16.2 0.2 3.2 2 1 1 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF30947 - 3.5e-05 24.0 5.3 0.031 14.5 0.8 2.7 1 1 2 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF30947 - 5.4e-05 23.7 6.9 7e-05 23.4 5.5 1.9 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF30947 - 6.9e-05 22.5 5.1 0.03 14.2 0.0 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF30947 - 0.00014 22.0 0.9 0.014 15.7 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF30947 - 0.0018 18.4 4.8 0.003 17.7 4.8 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF30947 - 0.0039 17.3 1.5 0.21 11.9 0.0 2.9 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF30947 - 0.0042 17.6 5.7 4.9 8.0 4.6 3.3 2 1 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF30947 - 0.034 14.2 3.5 0.13 12.3 0.1 2.6 1 1 1 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 ORF30947 - 0.046 14.2 3.1 0.21 12.1 2.8 1.9 1 1 1 2 2 2 0 Alkyl sulfatase dimerisation TPR_12 PF13424.6 ORF30947 - 0.056 13.7 6.0 0.043 14.1 2.4 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat PDGF_N PF04692.13 ORF30947 - 0.077 13.8 0.1 0.11 13.2 0.1 1.3 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region Dpy19 PF10034.9 ORF30494 - 0.18 10.0 3.4 0.18 9.9 3.4 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation MMgT PF10270.9 ORF29496 - 2.6e-10 40.5 0.0 2.8e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Membrane magnesium transporter DUF805 PF05656.14 ORF2933 - 4.1e-33 113.9 2.3 4.7e-33 113.7 2.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF805) YwiC PF14256.6 ORF2933 - 1.3 9.3 8.8 0.28 11.5 1.2 2.1 1 1 1 2 2 2 0 YwiC-like protein Pkinase PF00069.25 ORF29307 - 3.3e-17 62.7 1.5 3.7e-17 62.6 1.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29307 - 3.4e-09 36.4 0.4 4e-09 36.1 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Tim17 PF02466.19 ORF28570 - 8.4e-05 22.9 0.1 0.00012 22.5 0.1 1.1 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family TPR_6 PF13174.6 ORF28570 - 0.077 13.7 0.0 0.14 12.8 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Got1 PF04178.12 ORF28164 - 2.4e-34 118.1 17.0 3e-34 117.8 17.0 1.0 1 0 0 1 1 1 1 Got1/Sft2-like family DUF2244 PF10003.9 ORF28164 - 0.0054 16.4 5.8 0.0054 16.4 5.8 1.5 2 0 0 2 2 2 1 Integral membrane protein (DUF2244) DUF3429 PF11911.8 ORF28164 - 0.01 16.1 3.4 0.01 16.1 3.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3429) DUF417 PF04224.12 ORF28164 - 0.18 11.3 7.4 0.036 13.6 2.8 1.9 1 1 1 2 2 2 0 Protein of unknown function, DUF417 Ac81 PF05820.11 ORF28164 - 0.19 11.3 5.4 0.28 10.7 5.4 1.2 1 0 0 1 1 1 0 Baculoviridae AC81 DUF5090 PF17009.5 ORF28164 - 1.6 8.7 9.6 1.7 8.5 9.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF4064 PF13273.6 ORF28164 - 2.1 8.7 13.0 6.4 7.1 13.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) FA_desaturase PF00487.24 ORF28164 - 2.8 7.7 6.8 3.2 7.5 6.8 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2116 PF09889.9 ORF28164 - 6.4 6.8 5.8 0.93 9.5 1.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) PDZ_2 PF13180.6 ORF26607 - 0.0024 18.1 0.0 0.0034 17.7 0.0 1.2 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF26607 - 0.17 12.2 0.0 0.4 11.1 0.0 1.7 1 1 0 1 1 1 0 PDZ domain EndIII_4Fe-2S PF10576.9 ORF26607 - 0.6 10.5 4.8 1.8 9.0 0.3 2.5 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III Pkinase PF00069.25 ORF26463 - 1.4e-25 90.2 0.1 1.5e-25 90.1 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF26463 - 3.4e-16 59.3 0.0 3.7e-16 59.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF26463 - 0.011 15.2 0.3 0.018 14.4 0.3 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF26463 - 0.034 12.9 0.0 0.037 12.8 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase Cyclophil_like2 PF18050.1 ORF26463 - 0.074 13.0 0.0 0.096 12.6 0.0 1.4 1 1 0 1 1 1 0 Cyclophilin-like family DUF3898 PF13037.6 ORF26463 - 0.095 12.8 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3898) RCC1_2 PF13540.6 ORF26213 - 0.00046 19.9 0.5 0.14 12.0 0.1 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF26213 - 0.01 16.0 0.1 0.45 10.6 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PheRS_DBD2 PF18554.1 ORF26213 - 0.8 9.7 9.4 13 5.8 0.2 3.2 3 0 0 3 3 3 0 PheRS DNA binding domain 2 SDA1 PF05285.12 ORF25211 - 0.025 14.0 25.9 0.029 13.8 25.9 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF25211 - 0.39 8.9 26.0 0.4 8.8 26.0 1.0 1 0 0 1 1 1 0 Nop14-like family PTPRCAP PF15713.5 ORF25211 - 0.46 10.8 15.7 0.48 10.7 14.1 1.9 2 0 0 2 2 2 0 Protein tyrosine phosphatase receptor type C-associated RNA_pol_Rpc4 PF05132.14 ORF25211 - 0.6 10.5 4.6 0.72 10.3 4.6 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 NOA36 PF06524.12 ORF25211 - 0.78 9.0 25.7 0.97 8.7 25.7 1.2 1 0 0 1 1 1 0 NOA36 protein DUF913 PF06025.12 ORF25211 - 0.83 8.6 5.3 0.86 8.5 5.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) V_ATPase_I PF01496.19 ORF25211 - 1.3 6.8 7.9 1.4 6.8 7.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NPR3 PF03666.13 ORF25211 - 1.7 7.3 12.4 2.1 7.1 12.4 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CDC45 PF02724.14 ORF25211 - 1.8 6.8 21.3 1.9 6.7 21.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Afi1 PF07792.12 ORF25211 - 1.9 9.0 15.3 2.8 8.4 15.3 1.2 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking PPP4R2 PF09184.11 ORF25211 - 2.1 7.9 21.7 2.3 7.8 21.7 1.1 1 0 0 1 1 1 0 PPP4R2 Connexin PF00029.19 ORF25211 - 3.3 7.4 3.8 3.8 7.2 3.8 1.2 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 ORF25211 - 3.4 6.3 6.9 3.1 6.5 6.9 1.1 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 ORF25211 - 3.9 6.6 5.8 3.8 6.7 5.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Frag1 PF10277.9 ORF24012 - 0.0067 16.0 5.8 0.01 15.4 5.8 1.5 1 1 0 1 1 1 1 Frag1/DRAM/Sfk1 family C1_2 PF03107.16 ORF2267 - 0.0046 17.2 3.3 0.0073 16.6 3.3 1.4 1 0 0 1 1 1 1 C1 domain PHD_2 PF13831.6 ORF2267 - 0.018 14.6 4.8 0.03 13.9 0.9 2.2 1 1 1 2 2 2 0 PHD-finger DZR PF12773.7 ORF2267 - 0.049 13.7 0.4 0.072 13.1 0.4 1.2 1 0 0 1 1 1 0 Double zinc ribbon Zf_RING PF16744.5 ORF2267 - 0.081 13.0 2.0 0.17 12.0 2.0 1.5 1 0 0 1 1 1 0 KIAA1045 RING finger RecR PF02132.15 ORF2267 - 0.2 11.2 2.7 0.37 10.4 2.7 1.4 1 0 0 1 1 1 0 RecR protein zf-H2C2_2 PF13465.6 ORF2267 - 0.89 10.1 7.8 1.6 9.3 0.3 2.7 3 0 0 3 3 3 0 Zinc-finger double domain Metallophos PF00149.28 ORF21901 - 5e-20 72.9 0.3 5.9e-20 72.6 0.3 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Ank_2 PF12796.7 ORF21888 - 5.4e-18 65.4 0.2 9.8e-12 45.3 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF21888 - 2.6e-15 56.1 0.8 3.5e-07 30.4 0.0 3.8 3 1 1 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF21888 - 2.3e-10 39.8 0.3 0.003 17.9 0.0 3.9 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF21888 - 1.1e-09 38.6 0.0 0.00022 21.7 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF21888 - 8.8e-08 32.3 0.5 8.3e-07 29.2 0.2 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) MSL1_dimer PF16801.5 ORF21311 - 0.23 11.2 1.5 0.43 10.4 1.5 1.4 1 0 0 1 1 1 0 Dimerisation domain of Male-specific-Lethal 1 TAXi_N PF14543.6 ORF20473 - 0.0052 17.0 0.1 0.0062 16.8 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Biotin_lipoyl PF00364.22 ORF20457 - 1.5e-15 56.8 0.3 2.6e-15 56.0 0.3 1.4 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 ORF20457 - 1.2e-05 25.0 0.0 4e-05 23.4 0.0 1.8 1 1 1 2 2 2 1 Biotin-lipoyl like HlyD_3 PF13437.6 ORF20457 - 0.0013 19.4 0.0 0.23 12.2 0.0 2.2 1 1 1 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 ORF20457 - 0.0056 15.9 0.0 0.033 13.4 0.0 1.9 1 1 1 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion CAF1 PF04857.20 ORF19820 - 0.082 12.1 0.2 0.082 12.1 0.2 1.2 1 0 0 1 1 1 0 CAF1 family ribonuclease EF-hand_7 PF13499.6 ORF19284 - 1.6e-13 50.9 10.0 3.1e-10 40.3 3.7 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF19284 - 2e-12 45.7 5.8 5.2e-06 25.6 0.3 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF19284 - 1.3e-10 40.3 7.2 1.5e-05 24.5 1.4 3.4 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF19284 - 3.5e-08 32.6 5.3 0.00097 18.5 0.3 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF19284 - 3.7e-06 26.7 7.0 0.00026 20.8 0.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF19284 - 9.5e-05 22.7 1.0 0.0083 16.4 0.6 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region LXG PF04740.12 ORF19284 - 0.0014 18.3 0.5 0.0022 17.8 0.5 1.3 1 0 0 1 1 1 1 LXG domain of WXG superfamily NitrOD5 PF11537.8 ORF19284 - 0.007 16.5 1.0 0.024 14.8 0.3 2.1 1 1 1 2 2 2 1 Nitrosopumilus output domain 5 EF-hand_10 PF14788.6 ORF19284 - 0.016 15.1 3.8 0.84 9.5 0.4 2.5 2 1 0 2 2 2 0 EF hand p25-alpha PF05517.12 ORF19284 - 0.034 14.3 1.6 0.073 13.2 0.7 1.9 1 1 1 2 2 2 0 p25-alpha Glycos_trans_3N PF02885.17 ORF19284 - 0.037 13.9 0.2 4.1 7.3 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain HTH_57 PF18679.1 ORF19284 - 0.17 12.2 0.6 1.9 8.8 0.1 2.0 1 1 1 2 2 2 0 ThcOx helix turn helix domain Polysacc_syn_2C PF08485.10 ORF19284 - 0.46 10.2 3.7 8.9 6.1 0.1 2.8 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal PduV-EutP PF10662.9 ORF19250 - 2e-13 50.3 0.0 2.9e-13 49.8 0.0 1.3 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 ORF19250 - 0.016 14.7 0.0 0.02 14.4 0.0 1.1 1 0 0 1 1 1 0 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF19250 - 0.096 12.6 0.0 0.16 11.9 0.0 1.3 1 1 0 1 1 1 0 RsgA GTPase MMR_HSR1_Xtn PF16897.5 ORF19250 - 0.14 12.2 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain EF-hand_7 PF13499.6 ORF17865 - 1.6e-13 50.9 10.0 3.1e-10 40.3 3.7 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF17865 - 2e-12 45.7 5.8 5.2e-06 25.6 0.3 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF17865 - 1.3e-10 40.3 7.2 1.5e-05 24.5 1.4 3.4 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF17865 - 3.5e-08 32.6 5.3 0.00097 18.5 0.3 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF17865 - 3.7e-06 26.7 7.0 0.00026 20.8 0.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF17865 - 9.5e-05 22.7 1.0 0.0083 16.4 0.6 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region LXG PF04740.12 ORF17865 - 0.0014 18.3 0.5 0.0022 17.8 0.5 1.3 1 0 0 1 1 1 1 LXG domain of WXG superfamily NitrOD5 PF11537.8 ORF17865 - 0.007 16.5 1.0 0.024 14.8 0.3 2.1 1 1 1 2 2 2 1 Nitrosopumilus output domain 5 EF-hand_10 PF14788.6 ORF17865 - 0.016 15.1 3.8 0.84 9.5 0.4 2.5 2 1 0 2 2 2 0 EF hand p25-alpha PF05517.12 ORF17865 - 0.034 14.3 1.6 0.073 13.2 0.7 1.9 1 1 1 2 2 2 0 p25-alpha Glycos_trans_3N PF02885.17 ORF17865 - 0.037 13.9 0.2 4.1 7.3 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain HTH_57 PF18679.1 ORF17865 - 0.17 12.2 0.6 1.9 8.8 0.1 2.0 1 1 1 2 2 2 0 ThcOx helix turn helix domain Polysacc_syn_2C PF08485.10 ORF17865 - 0.46 10.2 3.7 8.9 6.1 0.1 2.8 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal DUF4636 PF15468.6 ORF17338 - 0.12 12.0 1.6 0.37 10.5 0.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4636) YjbR PF04237.13 ORF16916 - 1.7e-18 67.0 0.0 2e-18 66.7 0.0 1.1 1 0 0 1 1 1 1 YjbR DUF5519 PF17648.1 ORF16916 - 0.023 14.6 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5519) DUF905 PF06006.12 ORF15698 - 0.028 14.4 0.1 0.054 13.5 0.1 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF905) RNase_J_C PF17770.1 ORF14076 - 0.037 15.1 0.8 0.07 14.2 0.8 1.4 1 0 0 1 1 1 0 Ribonuclease J C-terminal domain PAT1 PF09770.9 ORF1405 - 3 6.0 7.2 3.2 5.9 7.2 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 CBP_BcsO PF17037.5 ORF12901 - 0.089 12.9 1.5 0.11 12.7 1.5 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsO Herpes_capsid PF06112.11 ORF12901 - 0.33 11.0 6.5 0.38 10.8 6.5 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein RhoGEF67_u1 PF16615.5 ORF12412 - 1.6 9.3 0.1 1.6 9.3 0.1 3.2 2 1 1 3 3 3 0 Unstructured region one on RhoGEF 6 and 7 DUF4636 PF15468.6 ORF12035 - 0.12 12.0 1.6 0.37 10.5 0.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4636) Ank_4 PF13637.6 ORF1197 - 4.4e-13 49.5 0.0 5.4e-06 26.8 0.0 2.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF1197 - 1.4e-12 48.0 0.0 2.5e-12 47.2 0.0 1.4 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF1197 - 9.2e-12 44.9 0.0 0.00019 21.7 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF1197 - 6.3e-08 32.3 0.0 0.016 15.7 0.0 2.8 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF1197 - 6.4e-06 26.4 0.1 0.00039 20.7 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Zip PF02535.22 ORF11240 - 3.9e-18 65.8 7.6 4.7e-18 65.5 7.6 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter DUF1129 PF06570.11 ORF11240 - 0.2 11.1 4.7 0.11 11.9 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3397 PF11877.8 ORF11240 - 5.6 7.2 11.5 25 5.1 7.6 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3397) Atg8 PF02991.16 ORF112282 - 4e-26 91.2 1.1 4.9e-26 90.9 1.1 1.1 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF112282 - 1.9e-07 31.4 0.2 1.9e-07 31.4 0.2 1.4 2 0 0 2 2 2 1 Ubiquitin-like autophagy protein Apg12 7TM_GPCR_Srz PF10325.9 ORF112282 - 0.031 13.6 0.3 0.038 13.3 0.3 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srz Binary_toxB_3 PF17476.2 ORF111249 - 0.33 11.1 3.6 0.32 11.2 2.6 1.6 1 1 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA domain 3 SAP18 PF06487.12 ORF110842 - 0.0044 17.2 0.1 0.0053 16.9 0.1 1.1 1 0 0 1 1 1 1 Sin3 associated polypeptide p18 (SAP18) DAHP_synth_2 PF01474.16 ORF110611 - 0.018 13.6 0.5 0.021 13.4 0.5 1.0 1 0 0 1 1 1 0 Class-II DAHP synthetase family PRF PF06875.11 ORF110611 - 0.026 13.9 0.2 0.036 13.5 0.2 1.2 1 0 0 1 1 1 0 Plethodontid receptivity factor PRF CH PF00307.31 ORF110543 - 3.1e-06 27.3 0.1 3.5e-06 27.1 0.1 1.1 1 0 0 1 1 1 1 Calponin homology (CH) domain HOOK PF05622.12 ORF110543 - 0.0005 18.4 0.2 0.00058 18.2 0.2 1.0 1 0 0 1 1 1 1 HOOK protein WSS_VP PF12175.8 ORF110417 - 0.0087 15.5 0.1 0.011 15.2 0.1 1.1 1 0 0 1 1 1 1 White spot syndrome virus structural envelope protein VP DUF948 PF06103.11 ORF10981 - 0.0011 19.1 1.2 0.002 18.4 0.5 1.6 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) Pyr_excise PF03013.14 ORF10981 - 0.014 15.4 1.6 0.017 15.1 1.6 1.2 1 0 0 1 1 1 0 Pyrimidine dimer DNA glycosylase LXG PF04740.12 ORF10981 - 0.019 14.6 5.8 0.35 10.6 0.2 2.1 1 1 1 2 2 2 0 LXG domain of WXG superfamily Spc7 PF08317.11 ORF10981 - 0.023 13.6 6.2 0.028 13.3 6.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein TMPIT PF07851.13 ORF10981 - 0.027 13.7 6.2 0.036 13.3 6.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein Laminin_I PF06008.14 ORF10981 - 0.027 14.2 4.6 0.031 14.0 4.6 1.1 1 0 0 1 1 1 0 Laminin Domain I Ribosomal_L13e PF01294.18 ORF10981 - 0.046 13.6 3.5 0.065 13.1 3.5 1.1 1 0 0 1 1 1 0 Ribosomal protein L13e DUF2089 PF09862.9 ORF10981 - 0.064 13.3 1.3 0.087 12.9 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) DUF3958 PF13125.6 ORF10981 - 0.083 13.1 7.1 0.099 12.9 7.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) ATP-synt_F6 PF05511.11 ORF10981 - 0.093 13.1 6.7 0.32 11.4 1.3 2.1 1 1 1 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 UPF0242 PF06785.11 ORF10981 - 0.094 12.8 7.1 0.1 12.7 7.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FlaC_arch PF05377.11 ORF10981 - 0.15 12.5 11.8 1.8 9.0 0.8 3.2 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) Goodbye PF17109.5 ORF10981 - 0.23 11.9 2.7 8.8 6.8 1.1 2.3 1 1 1 2 2 2 0 fungal STAND N-terminal Goodbye domain YabA PF06156.13 ORF10981 - 0.3 11.8 6.3 0.44 11.2 6.3 1.3 1 0 0 1 1 1 0 Initiation control protein YabA Snapin_Pallidin PF14712.6 ORF10981 - 0.53 10.7 8.2 1.8 9.0 3.7 2.2 1 1 1 2 2 2 0 Snapin/Pallidin DUF4298 PF14131.6 ORF10981 - 0.73 9.8 6.9 3.3 7.7 0.2 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4298) DUF2951 PF11166.8 ORF10981 - 1.5 9.1 7.5 0.9 9.8 3.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) DUF1492 PF07374.11 ORF10981 - 1.5 9.1 10.1 0.61 10.3 1.7 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1492) ZapB PF06005.12 ORF10981 - 4.2 7.9 9.8 21 5.7 0.2 2.6 2 1 1 3 3 3 0 Cell division protein ZapB gp45-slide_C PF09116.10 ORF109511 - 0.017 15.2 0.3 0.024 14.7 0.3 1.3 1 0 0 1 1 1 0 gp45 sliding clamp, C terminal Allexi_40kDa PF05549.11 ORF108410 - 0.22 11.0 2.3 0.26 10.8 2.3 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein RNA_bind PF08675.11 ORF108410 - 0.35 10.9 1.9 1.2 9.2 0.1 2.1 2 0 0 2 2 2 0 RNA binding domain Fzo_mitofusin PF04799.13 ORF108410 - 0.41 10.2 5.0 0.35 10.4 3.6 1.6 1 1 1 2 2 2 0 fzo-like conserved region DUF4860 PF16152.5 ORF104479 - 0.14 12.0 0.0 1.3 9.0 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4860) PH PF00169.29 ORF104445 - 3e-05 24.5 0.5 6.9e-05 23.3 0.5 1.5 1 1 0 1 1 1 1 PH domain DUF2383 PF09537.10 ORF104361 - 0.039 14.3 0.1 0.052 13.9 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF2383) RLI PF04068.15 ORF103191 - 0.014 15.2 1.1 0.028 14.2 1.1 1.5 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI 60KD_IMP PF02096.20 ORF101573 - 0.015 15.2 0.0 0.018 14.9 0.0 1.0 1 0 0 1 1 1 0 60Kd inner membrane protein Asp PF00026.23 ORF101287 - 3.5e-07 29.9 0.0 3.8e-07 29.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease RSRP PF17069.5 ORF100184 - 0.015 14.9 11.5 0.023 14.3 11.5 1.2 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Borrelia_lipo_1 PF05714.11 NODE_51756_length_349_cov_1.216561_g43842_i0forward_frame_1 - 0.006 16.4 0.5 0.0073 16.1 0.5 1.1 1 0 0 1 1 1 1 Borrelia burgdorferi virulent strain associated lipoprotein DUF5562 PF17717.1 NODE_51753_length_349_cov_1.624204_g43839_i0reverse_frame_1 - 0.027 14.5 0.0 0.039 13.9 0.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5562) DUF1492 PF07374.11 NODE_51753_length_349_cov_1.624204_g43839_i0forward_frame_1 - 0.015 15.5 0.0 0.019 15.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) C2-C2_1 PF11618.8 NODE_51749_length_349_cov_1.789809_g43835_i0reverse_frame_1 - 2.5e-13 50.3 0.0 3e-13 50.0 0.0 1.0 1 0 0 1 1 1 1 First C2 domain of RPGR-interacting protein 1 TRAP_beta PF05753.14 NODE_51745_length_349_cov_1.949045_g43831_i0reverse_frame_1 - 0.044 13.2 0.0 0.057 12.8 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) AMP-binding PF00501.28 NODE_51732_length_349_cov_2.592357_g43818_i0forward_frame_1 - 5.3e-33 114.2 0.0 5.7e-33 114.1 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme Pribosyltran PF00156.27 NODE_51721_length_349_cov_4.095541_g43807_i0reverse_frame_1 - 1.5e-10 40.8 0.0 1.6e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PAS_3 PF08447.12 NODE_51720_length_349_cov_4.095541_g43806_i0reverse_frame_1 - 0.12 12.7 0.1 0.19 12.0 0.1 1.3 1 0 0 1 1 1 0 PAS fold Molybdopterin PF00384.22 NODE_51720_length_349_cov_4.095541_g43806_i0forward_frame_1 - 4.8e-40 137.8 0.0 5.5e-40 137.6 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase SCAN PF02023.17 NODE_51720_length_349_cov_4.095541_g43806_i0forward_frame_1 - 0.14 12.0 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 SCAN domain Syd PF07348.12 NODE_51718_length_349_cov_5.060510_g43804_i0forward_frame_1 - 4.9e-22 78.4 0.1 6e-22 78.1 0.1 1.1 1 0 0 1 1 1 1 Syd protein (SUKH-2) Titin_Ig-rpts PF06582.12 NODE_51714_length_349_cov_8.659236_g43800_i0forward_frame_1 - 0.1 12.6 1.7 11 6.1 0.1 2.4 2 0 0 2 2 2 0 Titin repeat GREB1 PF15782.5 NODE_51713_length_349_cov_22.187898_g43799_i0forward_frame_1 - 0.039 11.1 5.0 0.041 11.0 5.0 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer IMUP PF15761.5 NODE_51713_length_349_cov_22.187898_g43799_i0forward_frame_1 - 0.076 13.7 9.5 0.099 13.3 9.5 1.3 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF5412 PF17428.2 NODE_51710_length_349_cov_36.856688_g43796_i0forward_frame_1 - 0.044 13.6 0.3 0.063 13.1 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5412) PetL PF05115.14 NODE_51702_length_349_cov_70.050955_g43788_i0reverse_frame_1 - 0.1 12.6 8.1 1.3 9.1 2.7 2.4 2 0 0 2 2 2 0 Cytochrome B6-F complex subunit VI (PetL) Cdd1 PF11731.8 NODE_51695_length_349_cov_80.334395_g43781_i0forward_frame_1 - 0.0071 16.6 0.3 0.01 16.1 0.3 1.2 1 0 0 1 1 1 1 Pathogenicity locus GSAP-16 PF14959.6 NODE_51692_length_349_cov_90.353503_g43778_i0forward_frame_1 - 0.12 12.3 2.9 0.2 11.5 0.1 2.0 2 0 0 2 2 2 0 gamma-Secretase-activating protein C-term Cyclotide PF03784.13 NODE_51690_length_349_cov_90.850318_g43776_i0reverse_frame_1 - 7.2 6.8 11.3 0.22 11.6 4.7 1.9 2 0 0 2 2 2 0 Cyclotide family PSD2 PF07624.11 NODE_51685_length_349_cov_104.872611_g43771_i0forward_frame_1 - 0.073 12.9 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1585) DUF3685 PF12452.8 NODE_51684_length_349_cov_109.210191_g43770_i0reverse_frame_1 - 0.0061 16.3 1.6 0.0067 16.1 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3685) DUF5388 PF17363.2 NODE_51684_length_349_cov_109.210191_g43770_i0reverse_frame_1 - 0.12 12.6 3.1 0.17 12.1 1.0 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5388) YfhO PF09586.10 NODE_51684_length_349_cov_109.210191_g43770_i0reverse_frame_1 - 2.1 6.5 5.0 2.4 6.3 5.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Gal-3-0_sulfotr PF06990.11 NODE_51683_length_349_cov_110.936306_g43769_i0reverse_frame_1 - 0.11 11.4 0.0 0.13 11.1 0.0 1.0 1 0 0 1 1 1 0 Galactose-3-O-sulfotransferase LAB_N PF07578.11 NODE_51683_length_349_cov_110.936306_g43769_i0forward_frame_1 - 0.07 13.2 0.2 0.097 12.8 0.2 1.3 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain WD40 PF00400.32 NODE_51682_length_349_cov_112.414013_g43768_i0forward_frame_1 - 1.8e-07 31.7 0.1 0.00018 22.2 0.2 2.3 2 0 0 2 2 2 2 WD domain, G-beta repeat Ge1_WD40 PF16529.5 NODE_51682_length_349_cov_112.414013_g43768_i0forward_frame_1 - 0.21 10.5 0.0 0.24 10.3 0.0 1.1 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein EbsA PF17255.2 NODE_51681_length_349_cov_119.210191_g43767_i0forward_frame_1 - 0.045 14.1 2.8 0.038 14.3 2.3 1.2 1 1 0 1 1 1 0 EbsA-like protein UPF0542 PF15086.6 NODE_51678_length_349_cov_165.684713_g43764_i0forward_frame_1 - 0.017 15.0 0.5 0.017 15.0 0.5 1.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0542 Herpes_UL31 PF02718.14 NODE_51669_length_349_cov_345.267516_g43755_i0forward_frame_1 - 0.11 11.5 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL31-like protein Rhodanese PF00581.20 NODE_51664_length_349_cov_943.668790_g43750_i0reverse_frame_1 - 1e-08 35.7 0.0 1.2e-08 35.4 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain zf-C6H2 PF15801.5 NODE_51652_length_350_cov_1.771429_g43738_i0forward_frame_1 - 0.016 15.5 0.1 0.034 14.4 0.1 1.5 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding A-2_8-polyST PF07388.11 NODE_51648_length_350_cov_1.987302_g43734_i0reverse_frame_1 - 0.0001 21.0 1.3 0.00015 20.5 1.3 1.2 1 0 0 1 1 1 1 Alpha-2,8-polysialyltransferase (POLYST) DUF1996 PF09362.10 NODE_51648_length_350_cov_1.987302_g43734_i0reverse_frame_1 - 0.0071 16.4 1.8 0.0071 16.4 1.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1996) Glyco_hydr_30_2 PF14587.6 NODE_51647_length_350_cov_2.019048_g43733_i0reverse_frame_1 - 0.033 13.8 0.1 0.04 13.5 0.1 1.1 1 0 0 1 1 1 0 O-Glycosyl hydrolase family 30 Deltameth_res PF16020.5 NODE_51635_length_350_cov_2.755556_g43721_i0reverse_frame_1 - 0.3 11.0 0.1 0.3 11.0 0.1 1.7 2 0 0 2 2 2 0 Deltamethrin resistance # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks198.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks198.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks198.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks198.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:21 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PRCH PF03967.13 NODE_51623_length_350_cov_34.406349_g43709_i0forward_frame_1 - 0.012 15.8 0.0 0.014 15.7 0.0 1.1 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region DUF2486 PF10667.9 NODE_51609_length_350_cov_73.784127_g43695_i0reverse_frame_1 - 0.013 15.7 4.5 0.016 15.5 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2486) Tape_meas_lam_C PF09718.10 NODE_51609_length_350_cov_73.784127_g43695_i0reverse_frame_1 - 0.021 14.9 2.1 0.087 13.0 0.9 2.0 1 1 1 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) ATP-synt_B PF00430.18 NODE_51609_length_350_cov_73.784127_g43695_i0reverse_frame_1 - 3.3 7.8 15.4 4 7.5 13.1 1.9 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) Toxin_35 PF10530.9 NODE_51607_length_350_cov_79.968254_g43693_i0forward_frame_1 - 0.092 12.7 7.8 0.14 12.2 7.8 1.2 1 0 0 1 1 1 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold COX14 PF14880.6 NODE_51604_length_350_cov_99.288889_g43690_i0reverse_frame_1 - 7e-05 22.6 0.2 0.00012 21.8 0.2 1.4 1 0 0 1 1 1 1 Cytochrome oxidase c assembly CREPT PF16566.5 NODE_51599_length_350_cov_115.155556_g43685_i0reverse_frame_1 - 0.02 15.1 0.5 0.023 14.8 0.5 1.1 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour S6OS1 PF15676.5 NODE_51599_length_350_cov_115.155556_g43685_i0reverse_frame_1 - 0.09 11.3 2.9 0.11 11.0 2.9 1.0 1 0 0 1 1 1 0 Six6 opposite strand transcript 1 family RNaseH_C PF09293.10 NODE_51598_length_350_cov_116.015873_g43684_i0reverse_frame_1 - 0.035 14.5 0.1 0.042 14.2 0.1 1.2 1 0 0 1 1 1 0 T4 RNase H, C terminal PCAF_N PF06466.11 NODE_51598_length_350_cov_116.015873_g43684_i0reverse_frame_1 - 0.05 13.2 3.2 0.061 12.9 3.2 1.2 1 0 0 1 1 1 0 PCAF (P300/CBP-associated factor) N-terminal domain Esterase PF00756.20 NODE_51588_length_350_cov_166.079365_g43674_i0reverse_frame_1 - 0.0014 18.4 0.8 0.0023 17.6 0.7 1.3 1 1 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 NODE_51588_length_350_cov_166.079365_g43674_i0reverse_frame_1 - 0.0023 17.4 0.7 0.0051 16.3 0.7 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 NODE_51588_length_350_cov_166.079365_g43674_i0reverse_frame_1 - 0.03 13.6 0.4 0.085 12.1 0.4 1.7 1 1 0 1 1 1 0 Serine aminopeptidase, S33 Acetyltransf_17 PF17668.1 NODE_51565_length_351_cov_1.946203_g43652_i0reverse_frame_1 - 0.17 12.7 0.0 0.2 12.5 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain UcrQ PF02939.16 NODE_51558_length_351_cov_2.313291_g43645_i0reverse_frame_1 - 0.083 12.8 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 UcrQ family LacY_symp PF01306.19 NODE_51558_length_351_cov_2.313291_g43645_i0forward_frame_1 - 4.7e-20 71.8 1.8 5.4e-20 71.5 1.8 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1 PF07690.16 NODE_51558_length_351_cov_2.313291_g43645_i0forward_frame_1 - 0.00015 20.8 0.1 0.00015 20.8 0.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF5562 PF17717.1 NODE_51558_length_351_cov_2.313291_g43645_i0forward_frame_1 - 0.0056 16.7 0.0 0.007 16.4 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5562) DUF4956 PF16316.5 NODE_51554_length_351_cov_2.496835_g43641_i0forward_frame_1 - 0.047 13.4 2.9 0.06 13.0 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4956) MFS_1 PF07690.16 NODE_51551_length_351_cov_2.829114_g43638_i0forward_frame_1 - 0.00028 19.9 0.1 0.00033 19.7 0.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily KAR9 PF08580.10 NODE_51548_length_351_cov_2.968354_g43635_i0reverse_frame_1 - 2.2 6.7 9.1 2.6 6.5 9.1 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 FA_desaturase PF00487.24 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.048 13.5 3.2 0.053 13.4 3.2 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF1772 PF08592.11 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.083 13.2 7.6 0.55 10.6 0.0 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF1772) MARVEL PF01284.23 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.11 12.5 9.0 1.8 8.6 8.5 2.3 1 1 0 1 1 1 0 Membrane-associating domain DUF2070 PF09843.9 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.13 10.5 10.2 0.15 10.4 10.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DHHC PF01529.20 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.43 10.7 7.5 0.1 12.7 4.3 1.7 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF4199 PF13858.6 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.46 10.9 10.0 0.16 12.4 7.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) TMEM192 PF14802.6 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.74 8.9 6.3 4.7 6.2 0.6 2.1 1 1 1 2 2 2 0 TMEM192 family DUF3169 PF11368.8 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 1.2 8.6 9.4 0.071 12.6 0.6 2.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3169) DUF3290 PF11694.8 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 1.6 8.7 6.6 2.7 8.0 5.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3290) DUF4131 PF13567.6 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 3.4 7.3 7.3 15 5.2 6.1 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) CoxIIa PF08113.11 NODE_51540_length_351_cov_4.177215_g43627_i0reverse_frame_1 - 0.21 11.5 0.0 0.31 10.9 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IIa family UTRA PF07702.13 NODE_51540_length_351_cov_4.177215_g43627_i0forward_frame_1 - 0.12 12.2 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 UTRA domain TetR_C_19 PF17924.1 NODE_51537_length_351_cov_5.705696_g43624_i0forward_frame_1 - 0.061 13.9 0.5 0.079 13.5 0.5 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain BTB PF00651.31 NODE_51535_length_351_cov_40.034810_g43622_i0forward_frame_1 - 0.00063 20.0 0.0 0.00093 19.4 0.0 1.2 1 0 0 1 1 1 1 BTB/POZ domain SURF1 PF02104.15 NODE_51534_length_351_cov_44.977848_g43621_i0forward_frame_1 - 0.14 12.4 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 SURF1 family Vmethyltransf PF01660.17 NODE_51506_length_351_cov_134.433544_g43593_i0reverse_frame_1 - 0.075 11.9 0.0 0.075 11.9 0.0 1.1 1 0 0 1 1 1 0 Viral methyltransferase Acid_PPase PF12689.7 NODE_51504_length_351_cov_143.037975_g43591_i0forward_frame_1 - 3.6e-10 39.9 0.0 6.9e-10 39.0 0.0 1.5 1 1 0 1 1 1 1 Acid Phosphatase RCC1_2 PF13540.6 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_1 - 3.2e-25 87.3 19.9 1.9e-10 40.2 3.6 3.9 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat Cuticle_1 PF08140.11 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_1 - 0.013 15.5 0.0 45 4.2 0.0 3.2 3 0 0 3 3 3 0 Crustacean cuticle protein repeat RCC1 PF00415.18 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_1 - 0.04 14.5 13.2 1.3 9.7 1.4 3.9 3 2 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat TBP PF00352.21 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_1 - 0.25 11.3 0.1 43 4.2 0.0 2.9 1 1 1 3 3 3 0 Transcription factor TFIID (or TATA-binding protein, TBP) zinc_ribbon_6 PF14599.6 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_1 - 0.039 14.0 9.9 0.29 11.2 1.1 3.1 3 0 0 3 3 3 0 Zinc-ribbon Lactamase_B_6 PF16661.5 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_1 - 0.12 11.8 0.0 30 4.0 0.0 2.9 3 0 0 3 3 3 0 Metallo-beta-lactamase superfamily domain GTP_EFTU PF00009.27 NODE_51496_length_351_cov_657.167722_g43583_i0forward_frame_1 - 2.4e-35 121.9 1.1 2.7e-35 121.7 1.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_51496_length_351_cov_657.167722_g43583_i0forward_frame_1 - 0.027 14.6 0.1 0.055 13.6 0.1 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF3874 PF12990.7 NODE_51489_length_351_cov_61498.658228_g43577_i0forward_frame_1 - 0.095 13.0 1.1 0.1 12.9 0.1 1.6 2 0 0 2 2 2 0 Domain of unknonw function from B. Theta Gene description (DUF3874) cNMP_binding PF00027.29 NODE_51486_length_352_cov_1.741325_g43574_i0reverse_frame_3 - 7.6e-05 22.7 0.0 0.00024 21.1 0.0 1.8 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain Globin PF00042.22 NODE_51486_length_352_cov_1.741325_g43574_i0reverse_frame_3 - 9.1e-05 23.0 0.0 0.00011 22.7 0.0 1.1 1 0 0 1 1 1 1 Globin Curto_V2 PF07325.11 NODE_51486_length_352_cov_1.741325_g43574_i0reverse_frame_3 - 0.063 13.2 0.2 0.086 12.7 0.2 1.3 1 0 0 1 1 1 0 Curtovirus V2 protein PMP1_2 PF08114.11 NODE_51484_length_352_cov_1.794953_g43572_i0reverse_frame_3 - 0.062 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 ATPase proteolipid family Kringle PF00051.18 NODE_51480_length_352_cov_1.952681_g43568_i0reverse_frame_3 - 0.0048 17.2 1.1 0.0087 16.3 1.1 1.5 1 0 0 1 1 1 1 Kringle domain Nodulin PF02451.15 NODE_51480_length_352_cov_1.952681_g43568_i0reverse_frame_2 - 0.11 12.0 1.1 0.13 11.8 1.1 1.1 1 0 0 1 1 1 0 Nodulin Multi_ubiq PF14452.6 NODE_51477_length_352_cov_2.018927_g43565_i0reverse_frame_2 - 0.023 14.9 0.0 0.045 14.0 0.0 1.4 1 0 0 1 1 1 0 Multiubiquitin MLTD_N PF06474.12 NODE_51476_length_352_cov_2.022082_g43564_i0forward_frame_3 - 5.1 7.3 9.6 5.1 7.4 1.6 2.7 2 1 0 2 2 2 0 MltD lipid attachment motif Glutaredoxin2_C PF04399.13 NODE_51476_length_352_cov_2.022082_g43564_i0forward_frame_2 - 4.3e-16 58.9 0.0 6.3e-16 58.4 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin 2, C terminal domain DUF3149 PF11346.8 NODE_51475_length_352_cov_2.031546_g43563_i0reverse_frame_2 - 0.11 12.1 0.1 0.11 12.1 0.1 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF3149) YabA PF06156.13 NODE_51470_length_352_cov_2.287066_g43558_i0forward_frame_2 - 0.0009 19.8 0.2 0.001 19.7 0.2 1.2 1 0 0 1 1 1 1 Initiation control protein YabA Longin PF13774.6 NODE_51469_length_352_cov_2.514196_g43557_i0reverse_frame_2 - 3.8e-10 39.7 0.1 4.9e-10 39.3 0.1 1.2 1 0 0 1 1 1 1 Regulated-SNARE-like domain LDcluster4 PF18306.1 NODE_51469_length_352_cov_2.514196_g43557_i0forward_frame_3 - 0.079 12.5 0.0 0.087 12.4 0.0 1.1 1 0 0 1 1 1 0 SLOG cluster4 family Thioredoxin PF00085.20 NODE_51467_length_352_cov_2.649842_g43555_i0reverse_frame_3 - 2.9e-08 33.6 0.2 3.4e-08 33.4 0.2 1.2 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 NODE_51467_length_352_cov_2.649842_g43555_i0reverse_frame_3 - 7.3e-05 22.3 0.0 7.4e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family DIM1 PF02966.16 NODE_51467_length_352_cov_2.649842_g43555_i0reverse_frame_3 - 0.057 13.2 0.1 0.07 12.9 0.1 1.2 1 0 0 1 1 1 0 Mitosis protein DIM1 Thioredoxin_6 PF13848.6 NODE_51467_length_352_cov_2.649842_g43555_i0reverse_frame_3 - 0.058 13.3 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain LRR_6 PF13516.6 NODE_51466_length_352_cov_2.772871_g43554_i0forward_frame_3 - 0.0025 17.7 0.1 2.9 8.2 0.0 2.6 2 0 0 2 2 2 2 Leucine Rich repeat Cluap1 PF10234.9 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.029 13.8 14.5 0.033 13.6 1.5 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 DUF4349 PF14257.6 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.18 11.2 1.7 0.58 9.6 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4349) DUF1664 PF07889.12 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.22 11.6 6.0 8.4 6.4 5.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.34 10.9 8.5 1.8 8.5 2.5 2.1 1 1 1 2 2 2 0 Laminin Domain II BST2 PF16716.5 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.44 11.2 6.9 0.39 11.3 2.5 2.2 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 XhlA PF10779.9 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 2.7 8.3 11.4 1.2 9.4 1.8 2.5 1 1 2 3 3 3 0 Haemolysin XhlA Svs_4_5_6 PF17381.2 NODE_51451_length_352_cov_73.429022_g43539_i0reverse_frame_2 - 0.092 13.7 1.3 0.14 13.1 0.0 1.8 2 0 0 2 2 2 0 Seminal vesicle secretory proteins 4/5/6 EamA PF00892.20 NODE_51444_length_352_cov_87.716088_g43532_i0reverse_frame_3 - 5.4e-05 23.4 1.9 7.6e-05 22.9 1.9 1.2 1 0 0 1 1 1 1 EamA-like transporter family PAP2_C PF14360.6 NODE_51444_length_352_cov_87.716088_g43532_i0reverse_frame_3 - 0.099 13.2 1.6 0.12 12.9 0.1 1.8 2 0 0 2 2 2 0 PAP2 superfamily C-terminal Glyco_trans_2_3 PF13632.6 NODE_51444_length_352_cov_87.716088_g43532_i0reverse_frame_2 - 0.03 14.2 0.1 0.035 14.0 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase family group 2 KOW PF00467.29 NODE_51439_length_352_cov_95.195584_g43527_i0reverse_frame_2 - 0.0035 17.2 0.2 0.0079 16.1 0.2 1.6 1 0 0 1 1 1 1 KOW motif TFIIS_C PF01096.18 NODE_51436_length_352_cov_101.104101_g43524_i0forward_frame_2 - 0.022 14.6 1.7 0.46 10.4 0.5 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zinc_ribbon_4 PF13717.6 NODE_51436_length_352_cov_101.104101_g43524_i0forward_frame_2 - 0.093 12.7 1.2 12 5.9 0.0 2.6 2 0 0 2 2 2 0 zinc-ribbon domain MMADHC PF10229.9 NODE_51429_length_352_cov_185.006309_g43517_i0forward_frame_3 - 0.17 11.6 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein Serinc PF03348.15 NODE_51427_length_352_cov_188.435331_g43515_i0reverse_frame_2 - 8.3e-17 61.2 0.1 9.1e-17 61.1 0.1 1.0 1 0 0 1 1 1 1 Serine incorporator (Serinc) DUF2985 PF11204.8 NODE_51427_length_352_cov_188.435331_g43515_i0reverse_frame_2 - 0.0018 18.4 1.8 0.0024 18.0 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2985) DUF4873 PF16170.5 NODE_51424_length_352_cov_251.517350_g43512_i0reverse_frame_3 - 0.18 12.0 0.0 0.82 9.9 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4873) Thymopoietin PF08198.11 NODE_51424_length_352_cov_251.517350_g43512_i0reverse_frame_2 - 0.047 13.3 0.1 0.082 12.5 0.1 1.3 1 0 0 1 1 1 0 Thymopoietin protein TMEM138 PF14935.6 NODE_51419_length_353_cov_1.248428_g43507_i0reverse_frame_3 - 0.037 14.7 1.2 0.037 14.7 1.2 2.0 1 1 1 2 2 2 0 Transmembrane protein 138 zf-BED PF02892.15 NODE_51419_length_353_cov_1.248428_g43507_i0reverse_frame_2 - 0.0085 16.1 0.3 0.016 15.2 0.3 1.4 1 0 0 1 1 1 1 BED zinc finger DUF1201 PF06716.11 NODE_51419_length_353_cov_1.248428_g43507_i0forward_frame_2 - 0.015 15.3 3.0 0.022 14.7 3.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1201) HECT PF00632.25 NODE_51418_length_353_cov_1.371069_g43506_i0forward_frame_2 - 4.3e-24 85.6 0.0 4.6e-24 85.5 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Pkinase PF00069.25 NODE_51417_length_353_cov_1.490566_g43505_i0forward_frame_3 - 2.1e-11 43.7 0.0 2.6e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_51417_length_353_cov_1.490566_g43505_i0forward_frame_3 - 0.00013 21.3 0.0 0.00018 20.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_51417_length_353_cov_1.490566_g43505_i0forward_frame_3 - 0.067 12.5 0.0 0.083 12.2 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Arrestin_N PF00339.29 NODE_51414_length_353_cov_1.622642_g43502_i0forward_frame_2 - 4.3e-06 26.8 0.0 5.4e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain PP2C PF00481.21 NODE_51412_length_353_cov_1.694969_g43500_i0forward_frame_3 - 2.3e-22 79.9 0.0 2.6e-22 79.7 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SH PF01445.17 NODE_51409_length_353_cov_2.006289_g43497_i0reverse_frame_3 - 0.18 11.8 2.1 0.24 11.4 0.1 2.2 3 0 0 3 3 3 0 Viral small hydrophobic protein UPF0270 PF06794.12 NODE_51407_length_353_cov_2.380503_g43495_i0reverse_frame_3 - 0.001 19.1 0.0 0.0017 18.4 0.0 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0270) Oxidored_molyb PF00174.19 NODE_51406_length_353_cov_2.393082_g43494_i0forward_frame_2 - 0.2 11.3 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain AA_permease PF00324.21 NODE_51405_length_353_cov_2.440252_g43493_i0forward_frame_3 - 2.5e-33 115.4 4.6 2.7e-33 115.3 4.6 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_51405_length_353_cov_2.440252_g43493_i0forward_frame_3 - 5.7e-08 32.0 5.3 5.8e-08 32.0 5.3 1.0 1 0 0 1 1 1 1 Amino acid permease Frizzled PF01534.17 NODE_51405_length_353_cov_2.440252_g43493_i0forward_frame_3 - 0.035 13.1 0.0 0.043 12.9 0.0 1.1 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region tRNA_synthFbeta PF17759.1 NODE_51402_length_353_cov_2.559748_g43490_i0forward_frame_3 - 6.5e-30 104.2 0.0 7e-30 104.1 0.0 1.0 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain Peptidase_M32 PF02074.15 NODE_51402_length_353_cov_2.559748_g43490_i0forward_frame_3 - 0.22 10.2 0.0 0.27 10.0 0.0 1.2 1 1 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase MFS_1 PF07690.16 NODE_51399_length_353_cov_2.823899_g43487_i0reverse_frame_2 - 0.0022 17.0 0.5 0.0024 16.9 0.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 NODE_51399_length_353_cov_2.823899_g43487_i0reverse_frame_2 - 0.0083 14.7 0.3 0.0086 14.7 0.3 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein DUF1652 PF07865.11 NODE_51399_length_353_cov_2.823899_g43487_i0forward_frame_3 - 0.055 13.3 0.2 0.085 12.7 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) Herpes_UL31 PF02718.14 NODE_51395_length_353_cov_3.182390_g43483_i0reverse_frame_2 - 0.0074 15.3 0.1 0.0081 15.2 0.1 1.1 1 0 0 1 1 1 1 Herpesvirus UL31-like protein HEPN_AbiA_CTD PF18732.1 NODE_51394_length_353_cov_3.207547_g43482_i0forward_frame_2 - 0.057 13.4 4.4 0.058 13.3 4.4 1.1 1 0 0 1 1 1 0 HEPN like, Abia C-terminal domain Bac_GH3_C PF18034.1 NODE_51392_length_353_cov_3.349057_g43480_i0reverse_frame_3 - 0.00096 18.9 0.0 0.0012 18.5 0.0 1.2 1 0 0 1 1 1 1 Bacterial Glycosyl hydrolase family 3 C-terminal domain ADSL_C PF10397.9 NODE_51392_length_353_cov_3.349057_g43480_i0reverse_frame_3 - 0.0096 16.5 0.1 0.016 15.8 0.1 1.3 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus ABC_ATPase PF09818.9 NODE_51392_length_353_cov_3.349057_g43480_i0reverse_frame_3 - 0.024 13.4 1.3 0.027 13.3 1.3 1.0 1 0 0 1 1 1 0 Predicted ATPase of the ABC class RF-1 PF00472.20 NODE_51392_length_353_cov_3.349057_g43480_i0reverse_frame_3 - 0.075 13.0 4.2 0.1 12.5 4.1 1.3 1 1 0 1 1 1 0 RF-1 domain DUF2615 PF11027.8 NODE_51387_length_353_cov_22.965409_g43475_i0reverse_frame_2 - 0.13 12.4 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) DUF2615 PF11027.8 NODE_51386_length_353_cov_22.990566_g43474_i0reverse_frame_2 - 0.088 13.0 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) Topoisom_I_N PF02919.15 NODE_51385_length_353_cov_29.704403_g43473_i0forward_frame_3 - 0.39 10.2 13.0 0.033 13.7 8.0 1.6 1 1 1 2 2 2 0 Eukaryotic DNA topoisomerase I, DNA binding fragment DUF2691 PF10903.8 NODE_51384_length_353_cov_36.462264_g43472_i0reverse_frame_3 - 0.015 15.2 0.5 0.026 14.4 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2691) TyrRSs_C PF16714.5 NODE_51384_length_353_cov_36.462264_g43472_i0reverse_frame_3 - 0.047 13.5 0.3 0.075 12.8 0.2 1.4 1 1 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain BmKX PF09132.10 NODE_51374_length_353_cov_68.270440_g43462_i0reverse_frame_3 - 0.18 11.8 1.4 0.22 11.5 0.3 1.6 2 0 0 2 2 2 0 BmKX bZIP_1 PF00170.21 NODE_51368_length_353_cov_77.650943_g43456_i0reverse_frame_2 - 7.4 6.8 13.8 13 6.0 0.7 2.2 2 0 0 2 2 2 0 bZIP transcription factor Sororin PF09666.10 NODE_51366_length_353_cov_86.327044_g43454_i0forward_frame_3 - 0.037 14.3 0.6 0.052 13.8 0.6 1.4 1 1 0 1 1 1 0 Sororin protein AAA_lid_3 PF17862.1 NODE_51362_length_353_cov_104.776730_g43450_i0reverse_frame_3 - 3.5e-05 23.5 0.0 8.5e-05 22.3 0.0 1.7 2 0 0 2 2 2 1 AAA+ lid domain Vps4_C PF09336.10 NODE_51362_length_353_cov_104.776730_g43450_i0reverse_frame_3 - 0.013 15.5 0.0 0.19 11.7 0.0 2.2 2 1 0 2 2 2 0 Vps4 C terminal oligomerisation domain AGH PF17558.2 NODE_51361_length_353_cov_109.336478_g43449_i0forward_frame_2 - 0.12 12.5 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Androgenic gland hormone Med30 PF11315.8 NODE_51360_length_353_cov_122.500000_g43448_i0forward_frame_2 - 0.088 13.0 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 30 RCC1_2 PF13540.6 NODE_51356_length_353_cov_150.864780_g43444_i0forward_frame_3 - 4.2e-05 23.2 6.7 0.23 11.3 0.1 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Calpain_III PF01067.22 NODE_51355_length_353_cov_154.336478_g43443_i0reverse_frame_2 - 0.0097 16.2 0.9 0.013 15.8 0.9 1.1 1 0 0 1 1 1 1 Calpain large subunit, domain III Amj PF10997.8 NODE_51354_length_353_cov_158.396226_g43442_i0forward_frame_3 - 0.002 17.5 1.8 0.0024 17.2 1.8 1.1 1 0 0 1 1 1 1 Alternate to MurJ NHL PF01436.21 NODE_51351_length_353_cov_223.808176_g43439_i0reverse_frame_3 - 0.12 12.5 0.1 0.3 11.2 0.0 1.7 2 0 0 2 2 2 0 NHL repeat Otopetrin PF03189.13 NODE_51350_length_353_cov_232.584906_g43438_i0reverse_frame_3 - 0.05 12.4 0.1 0.053 12.3 0.1 1.0 1 0 0 1 1 1 0 Otopetrin BEN PF10523.9 NODE_51345_length_353_cov_524.163522_g43433_i0forward_frame_2 - 0.085 13.1 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 BEN domain Nodulin_late PF07127.11 NODE_51344_length_353_cov_983.308176_g43432_i0reverse_frame_3 - 1.1 9.7 5.2 0.3 11.5 1.2 2.0 1 1 1 2 2 2 0 Late nodulin protein YmcE_antitoxin PF15939.5 NODE_51344_length_353_cov_983.308176_g43432_i0forward_frame_2 - 0.16 12.1 0.6 0.29 11.3 0.6 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system DUF3397 PF11877.8 NODE_51343_length_353_cov_1012.028302_g43431_i0reverse_frame_2 - 1.9 8.7 14.7 0.13 12.5 7.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3397) zf-Tim10_DDP PF02953.15 NODE_51343_length_353_cov_1012.028302_g43431_i0forward_frame_2 - 0.00039 20.0 2.1 0.00071 19.2 1.6 1.7 1 1 1 2 2 2 1 Tim10/DDP family zinc finger Mad3_BUB1_I_2 PF17014.5 NODE_51343_length_353_cov_1012.028302_g43431_i0forward_frame_2 - 0.0036 17.4 4.3 0.0053 16.9 3.5 1.6 1 1 1 2 2 2 1 Putative Mad3/BUB1 like region 1 protein DUF3890 PF13029.6 NODE_51342_length_353_cov_3455.393082_g43430_i0reverse_frame_2 - 0.01 16.3 0.0 0.016 15.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3890) DUF2070 PF09843.9 NODE_51339_length_354_cov_1.341693_g43427_i0forward_frame_2 - 8.1 4.6 10.1 9.5 4.4 10.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) zf-rbx1 PF12678.7 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 0.14 12.5 1.4 0.17 12.2 0.1 1.9 2 0 0 2 2 2 0 RING-H2 zinc finger domain AC_N PF16214.5 NODE_51337_length_354_cov_1.423197_g43425_i0reverse_frame_3 - 7.7 5.5 7.5 8 5.5 7.5 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region ORF6N PF10543.9 NODE_51337_length_354_cov_1.423197_g43425_i0forward_frame_2 - 0.93 9.7 4.1 3.6 7.8 0.7 2.1 1 1 1 2 2 2 0 ORF6N domain DUF4763 PF15960.5 NODE_51333_length_354_cov_1.617555_g43421_i0reverse_frame_3 - 0.018 14.3 1.9 0.022 14.1 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) ATG16 PF08614.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.0029 17.9 2.5 0.0039 17.5 2.5 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) CymA PF16941.5 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.026 13.7 0.1 0.03 13.5 0.1 1.2 1 0 0 1 1 1 0 Putative cyclodextrin porin ATP-synt_F6 PF05511.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.045 14.2 0.6 0.045 14.2 0.6 2.1 1 1 1 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 DUF724 PF05266.14 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.21 11.4 6.6 0.28 11.0 6.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF1640 PF07798.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.32 11.0 8.7 0.42 10.6 8.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) MRPL52 PF18699.1 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.33 11.2 5.6 0.092 12.9 1.8 1.9 1 1 1 2 2 2 0 Mitoribosomal protein mL52 P120R PF08062.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.35 11.3 0.3 0.35 11.3 0.3 2.3 2 0 0 2 2 2 0 P120R (NUC006) repeat DUF4407 PF14362.6 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.36 10.1 3.0 0.41 10.0 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Cnn_1N PF07989.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 1.4 9.1 9.5 0.63 10.2 6.2 2.2 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 DivIC PF04977.15 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 1.6 8.6 9.0 9.3 6.1 9.0 2.1 1 1 0 1 1 1 0 Septum formation initiator DUF2612 PF11041.8 NODE_51328_length_354_cov_1.902821_g43416_i0forward_frame_3 - 0.023 14.7 0.7 0.072 13.0 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2612) FAP PF07174.11 NODE_51327_length_354_cov_1.909091_g43415_i0reverse_frame_2 - 2.8 7.3 9.2 3.3 7.1 9.2 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_51327_length_354_cov_1.909091_g43415_i0forward_frame_3 - 0.021 14.8 2.3 0.027 14.5 2.3 1.1 1 0 0 1 1 1 0 Lamprin DUF1664 PF07889.12 NODE_51325_length_354_cov_2.034483_g43413_i0reverse_frame_3 - 0.00097 19.2 0.0 0.0012 18.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Nucleoporin_FG2 PF15967.5 NODE_51324_length_354_cov_2.094044_g43412_i0forward_frame_2 - 0.094 11.2 0.1 0.1 11.1 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin FG repeated region RXLR PF16810.5 NODE_51319_length_354_cov_2.222571_g43407_i0reverse_frame_3 - 2.9 8.3 7.2 5.4 7.4 7.2 1.4 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity DUF4131 PF13567.6 NODE_51319_length_354_cov_2.222571_g43407_i0forward_frame_3 - 0.19 11.4 4.2 0.21 11.3 4.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Fijivirus_P9-2 PF06837.11 NODE_51310_length_354_cov_2.899687_g43398_i0reverse_frame_2 - 0.11 11.9 5.3 0.14 11.6 5.3 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein UDPG_MGDP_dh PF00984.19 NODE_51309_length_354_cov_2.946708_g43397_i0reverse_frame_3 - 1.3e-28 99.0 0.0 1.6e-28 98.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATP-synt_G PF04718.15 NODE_51307_length_354_cov_3.025078_g43395_i0reverse_frame_2 - 0.0063 17.3 0.4 0.0077 17.0 0.4 1.1 1 0 0 1 1 1 1 Mitochondrial ATP synthase g subunit PNGaseA PF12222.8 NODE_51305_length_354_cov_3.338558_g43393_i0forward_frame_2 - 2.4 6.9 8.2 2.7 6.8 8.2 1.1 1 0 0 1 1 1 0 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A O-antigen_lig PF13425.6 NODE_51305_length_354_cov_3.338558_g43393_i0forward_frame_2 - 2.4 6.8 6.3 2.6 6.8 6.3 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein FAD_binding_2 PF00890.24 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 8.8e-08 31.6 0.5 1e-07 31.4 0.5 1.1 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 3.5e-05 23.2 0.1 4.7e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.00015 21.1 0.6 0.00021 20.7 0.6 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.0066 15.6 0.9 0.0088 15.2 0.9 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.013 14.2 1.4 0.018 13.8 1.4 1.2 1 0 0 1 1 1 0 HI0933-like protein Lycopene_cycl PF05834.12 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.026 13.6 0.4 0.033 13.2 0.4 1.1 1 0 0 1 1 1 0 Lycopene cyclase protein DAO PF01266.24 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.053 13.1 0.1 0.076 12.6 0.1 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_oxidored PF12831.7 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.21 10.9 3.4 0.27 10.6 3.4 1.1 1 0 0 1 1 1 0 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.21 10.8 2.6 0.29 10.3 2.6 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase HrcA_DNA-bdg PF03444.15 NODE_51303_length_354_cov_3.567398_g43391_i0reverse_frame_3 - 0.12 12.1 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Mucin PF01456.17 NODE_51302_length_354_cov_4.000000_g43390_i0reverse_frame_3 - 0.0087 16.1 51.3 0.013 15.4 51.3 1.3 1 0 0 1 1 1 1 Mucin-like glycoprotein MGC-24 PF05283.11 NODE_51302_length_354_cov_4.000000_g43390_i0reverse_frame_3 - 1 9.8 23.2 1.3 9.4 23.2 1.2 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin FSA_C PF10479.9 NODE_51302_length_354_cov_4.000000_g43390_i0reverse_frame_3 - 8.7 4.3 24.2 9.3 4.2 24.2 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF805 PF05656.14 NODE_51302_length_354_cov_4.000000_g43390_i0forward_frame_3 - 5.1 7.6 11.6 6.5 7.2 11.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF805) Transformer PF06495.11 NODE_51302_length_354_cov_4.000000_g43390_i0forward_frame_2 - 0.26 11.4 17.0 0.3 11.2 17.0 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein RSB_motif PF16294.5 NODE_51302_length_354_cov_4.000000_g43390_i0forward_frame_2 - 2.3 8.5 7.6 3 8.2 7.6 1.1 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif YdjM PF04307.14 NODE_51291_length_354_cov_68.708464_g43379_i0reverse_frame_2 - 0.023 14.0 0.4 0.023 14.0 0.4 1.1 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase BAG6 PF12057.8 NODE_51284_length_354_cov_80.341693_g43372_i0forward_frame_2 - 0.37 10.5 2.3 3.5 7.4 0.1 2.1 1 1 1 2 2 2 0 BCL2-associated athanogene 6 FSAP_sig_propep PF03032.15 NODE_51281_length_354_cov_83.351097_g43369_i0reverse_frame_3 - 7.4 6.7 7.5 4.5 7.4 2.1 2.6 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide Antigen_Bd37 PF11641.8 NODE_51279_length_354_cov_86.131661_g43367_i0reverse_frame_2 - 0.04 13.4 0.0 0.04 13.4 0.0 1.1 1 0 0 1 1 1 0 Glycosylphosphatidylinositol-anchored merozoite surface protein LRR_8 PF13855.6 NODE_51271_length_354_cov_121.645768_g43359_i0reverse_frame_2 - 0.0096 15.7 0.5 0.018 14.8 0.5 1.4 1 0 0 1 1 1 1 Leucine rich repeat Spore_GerAC PF05504.11 NODE_51265_length_354_cov_219.827586_g43353_i0forward_frame_2 - 0.012 15.8 3.5 0.014 15.6 3.5 1.1 1 0 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal RRM_4 PF10598.9 NODE_51263_length_354_cov_256.990596_g43351_i0reverse_frame_2 - 0.12 12.7 0.0 0.18 12.2 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif of the spliceosomal PrP8 ATPase_gene1 PF09527.10 NODE_51261_length_354_cov_333.601881_g43349_i0forward_frame_2 - 0.088 13.0 0.4 7.4 6.8 0.1 2.2 2 0 0 2 2 2 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter YMF19 PF02326.15 NODE_51260_length_354_cov_407.721003_g43348_i0reverse_frame_3 - 0.79 10.5 5.7 1.1 10.1 5.7 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 Herpes_U47 PF05467.11 NODE_51260_length_354_cov_407.721003_g43348_i0reverse_frame_2 - 0.23 9.6 2.1 0.29 9.2 2.1 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 Gemini_C4 PF01492.17 NODE_51258_length_354_cov_469.257053_g41382_i1forward_frame_3 - 0.056 13.4 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 Geminivirus C4 protein Bim_N PF06773.11 NODE_51258_length_354_cov_469.257053_g41382_i1forward_frame_3 - 0.11 12.3 0.4 0.23 11.2 0.4 1.5 1 0 0 1 1 1 0 Bim protein N-terminus DUF1664 PF07889.12 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.0019 18.2 1.1 0.0037 17.3 1.0 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) DUF1690 PF07956.11 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.024 15.0 0.9 0.031 14.7 0.9 1.3 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF948 PF06103.11 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.035 14.4 0.9 0.51 10.6 0.1 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Prefoldin PF02996.17 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.037 13.9 3.3 6.7 6.7 0.2 2.7 1 1 1 3 3 3 0 Prefoldin subunit NPV_P10 PF05531.12 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.041 14.4 2.2 0.075 13.5 0.8 2.0 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein Laminin_II PF06009.12 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.065 13.3 1.7 0.15 12.1 1.7 1.7 1 1 0 1 1 1 0 Laminin Domain II BLOC1_2 PF10046.9 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.072 13.4 6.8 0.65 10.3 5.6 2.3 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 XhlA PF10779.9 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.09 13.0 4.0 0.12 12.5 0.7 2.2 2 0 0 2 2 2 0 Haemolysin XhlA COMPASS-Shg1 PF05205.12 NODE_51253_length_354_cov_2189.385580_g43343_i0reverse_frame_3 - 0.0052 17.5 0.2 0.006 17.3 0.2 1.1 1 0 0 1 1 1 1 COMPASS (Complex proteins associated with Set1p) component shg1 DUF229 PF02995.17 ORF98533 - 1.5e-09 37.0 0.2 1.7e-09 36.8 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF98533 - 5.6e-08 32.5 0.0 6.7e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Sulfatase DUF3646 PF12362.8 ORF97210 - 0.053 13.8 0.1 0.26 11.6 0.0 1.9 1 1 1 2 2 2 0 DNA polymerase III gamma and tau subunits C terminal HEPN_Apea PF18739.1 ORF95846 - 0.033 14.6 0.1 0.044 14.2 0.1 1.2 1 0 0 1 1 1 0 Apea-like HEPN FOG_N PF15888.5 ORF95846 - 0.04 14.3 0.2 0.046 14.1 0.2 1.1 1 0 0 1 1 1 0 Folded gastrulation N-terminus CsgA PF17334.2 ORF95846 - 0.072 13.8 0.2 0.09 13.5 0.2 1.3 1 0 0 1 1 1 0 Minor curli fiber component A Ras PF00071.22 ORF95562 - 1.9e-35 121.9 0.0 2.1e-35 121.7 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF95562 - 2.3e-27 95.6 0.0 2.5e-27 95.5 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF95562 - 5e-07 29.3 0.1 5.6e-07 29.2 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF95562 - 7e-06 26.1 0.0 7.6e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase MCM PF00493.23 ORF95562 - 0.0057 15.8 0.0 0.0075 15.4 0.0 1.1 1 0 0 1 1 1 1 MCM P-loop domain Gtr1_RagA PF04670.12 ORF95562 - 0.016 14.6 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF95562 - 0.061 13.2 0.0 0.11 12.4 0.0 1.5 1 1 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 ORF95562 - 0.065 13.6 0.0 0.079 13.3 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 ORF95562 - 0.081 13.4 0.0 0.089 13.2 0.0 1.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) FeoB_N PF02421.18 ORF95562 - 0.097 12.2 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B AAA_22 PF13401.6 ORF95562 - 0.098 12.9 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 ORF95562 - 0.1 12.6 0.0 0.12 12.4 0.0 1.4 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) VirE2 PF07229.12 ORF95562 - 0.11 11.1 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 VirE2 DAP3 PF10236.9 ORF95562 - 0.14 11.3 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_33 PF13671.6 ORF95562 - 0.15 12.2 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain DUF3646 PF12362.8 ORF95098 - 0.053 13.8 0.1 0.26 11.6 0.0 1.9 1 1 1 2 2 2 0 DNA polymerase III gamma and tau subunits C terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks199.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks199.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks199.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks199.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Alpha-amylase PF00128.24 ORF74306 - 5e-57 194.0 4.4 1.4e-56 192.5 4.4 1.7 1 1 0 1 1 1 1 Alpha amylase, catalytic domain hDGE_amylase PF14701.6 ORF74306 - 0.00091 18.4 0.0 0.0021 17.2 0.0 1.5 1 0 0 1 1 1 1 Glycogen debranching enzyme, glucanotransferase domain SH3_13 PF18335.1 ORF74306 - 0.028 14.3 0.0 0.18 11.6 0.0 2.2 2 0 0 2 2 2 0 ATP-dependent RecD-like DNA helicase SH3 domain Peptidase_S10 PF00450.22 ORF63990 - 4.9e-112 375.4 0.7 5.8e-112 375.1 0.7 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase ABC2_membrane_3 PF12698.7 ORF60357 - 1.7e-23 83.3 23.6 1.7e-23 83.3 23.6 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein EF-hand_7 PF13499.6 ORF59023 - 2.5e-12 47.0 5.6 1.1e-07 32.2 0.3 2.3 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF59023 - 3.7e-11 41.7 0.4 0.00031 20.1 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF59023 - 4.5e-10 38.6 0.0 0.0017 18.2 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain Ion_trans PF00520.31 ORF59023 - 6.5e-10 38.7 3.0 2.4e-09 36.8 3.6 1.6 2 0 0 2 2 2 1 Ion transport protein EF-hand_5 PF13202.6 ORF59023 - 1.3e-09 37.1 0.4 0.0003 20.1 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF59023 - 4e-05 23.4 0.2 0.17 11.7 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair TIP49 PF06068.13 ORF40205 - 1.7e-158 527.5 4.9 1.7e-158 527.5 4.9 1.3 2 0 0 2 2 2 1 TIP49 P-loop domain TIP49_C PF17856.1 ORF40205 - 1.2e-27 95.8 0.6 3.4e-27 94.4 0.6 1.9 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 ORF40205 - 1.5e-09 38.4 4.0 8.5e-06 26.2 0.5 2.9 2 1 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) DnaB_C PF03796.15 ORF40205 - 2.7e-06 26.9 2.1 3.5e-06 26.5 0.9 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain RuvB_N PF05496.12 ORF40205 - 3.7e-06 26.8 0.4 0.015 15.1 0.1 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF40205 - 3.9e-05 23.9 0.1 0.088 13.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 ORF40205 - 0.00029 21.3 0.3 0.0017 18.8 0.2 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF40205 - 0.00039 20.4 0.1 0.29 11.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 ORF40205 - 0.00041 20.7 1.9 0.021 15.2 1.9 2.5 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF40205 - 0.00084 19.1 0.1 1.7 8.3 0.1 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF40205 - 0.0022 17.4 1.1 0.21 11.0 0.5 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 ORF40205 - 0.003 16.9 0.5 0.007 15.7 0.5 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_25 PF13481.6 ORF40205 - 0.0038 16.8 0.1 0.0074 15.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 ORF40205 - 0.017 14.4 0.0 0.029 13.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF40205 - 0.04 13.4 0.1 0.19 11.2 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_11 PF13086.6 ORF40205 - 0.081 12.7 1.3 0.46 10.2 1.3 2.1 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF40205 - 0.096 13.1 1.5 0.23 11.9 0.9 2.1 2 1 0 2 2 1 0 AAA domain ResIII PF04851.15 ORF40205 - 0.13 12.3 0.7 2.9 7.9 0.7 2.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit TPR_12 PF13424.6 ORF38793 - 3.1e-13 49.8 11.0 1.3e-06 28.6 0.6 5.1 4 2 2 6 6 6 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF38793 - 3.5e-13 49.0 12.8 0.017 15.0 0.1 6.6 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_4 PF07721.14 ORF38793 - 0.00084 19.7 19.0 0.92 10.3 0.2 5.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF38793 - 0.0072 17.1 22.9 2.3 9.3 0.1 6.0 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_20 PF14561.6 ORF38793 - 0.056 13.8 8.5 0.27 11.6 0.2 4.5 3 2 2 5 5 5 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF38793 - 0.069 13.4 0.6 0.51 10.6 0.2 2.6 2 1 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 ORF38793 - 0.21 11.7 2.4 26 5.1 0.2 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF38793 - 0.52 10.6 6.9 27 5.2 0.2 4.8 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF38793 - 4.4 8.0 20.4 13 6.6 0.3 4.8 4 2 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF38793 - 4.9 7.7 13.3 13 6.4 0.1 4.2 4 1 0 4 4 4 0 Tetratricopeptide repeat Aconitase PF00330.20 ORF33230 - 1.6e-162 541.7 0.4 1.8e-162 541.5 0.4 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Spo0M PF07070.11 ORF33230 - 0.13 11.7 0.8 0.23 11.0 0.8 1.3 1 0 0 1 1 1 0 SpoOM protein Peptidase_S10 PF00450.22 ORF27113 - 4.9e-112 375.4 0.7 5.8e-112 375.1 0.7 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase TIP49 PF06068.13 ORF17402 - 1.7e-158 527.5 4.9 1.7e-158 527.5 4.9 1.3 2 0 0 2 2 2 1 TIP49 P-loop domain TIP49_C PF17856.1 ORF17402 - 1.2e-27 95.8 0.6 3.4e-27 94.4 0.6 1.9 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 ORF17402 - 1.5e-09 38.4 4.0 8.5e-06 26.2 0.5 2.9 2 1 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) DnaB_C PF03796.15 ORF17402 - 2.7e-06 26.9 2.1 3.5e-06 26.5 0.9 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain RuvB_N PF05496.12 ORF17402 - 3.7e-06 26.8 0.4 0.015 15.1 0.1 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF17402 - 3.9e-05 23.9 0.1 0.088 13.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 ORF17402 - 0.00029 21.3 0.3 0.0017 18.8 0.2 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF17402 - 0.00039 20.4 0.1 0.29 11.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 ORF17402 - 0.00041 20.7 1.9 0.021 15.2 1.9 2.5 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF17402 - 0.00084 19.1 0.1 1.7 8.3 0.1 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF17402 - 0.0022 17.4 1.1 0.21 11.0 0.5 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 ORF17402 - 0.003 16.9 0.5 0.007 15.7 0.5 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_25 PF13481.6 ORF17402 - 0.0038 16.8 0.1 0.0074 15.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 ORF17402 - 0.017 14.4 0.0 0.029 13.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF17402 - 0.04 13.4 0.1 0.19 11.2 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_11 PF13086.6 ORF17402 - 0.081 12.7 1.3 0.46 10.2 1.3 2.1 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF17402 - 0.096 13.1 1.5 0.23 11.9 0.9 2.1 2 1 0 2 2 1 0 AAA domain ResIII PF04851.15 ORF17402 - 0.13 12.3 0.7 2.9 7.9 0.7 2.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit DUF2431 PF10354.9 ORF17128 - 5.4e-22 78.8 0.0 8.6e-22 78.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) DUF664 PF04978.12 ORF17128 - 0.13 12.6 2.2 0.26 11.7 0.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF664) DUF3782 PF12644.7 ORF17128 - 0.21 11.8 0.7 0.68 10.1 0.0 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3782) TauD PF02668.16 ORF13215 - 6.6e-17 62.2 1.6 8.7e-15 55.2 0.2 3.0 2 1 0 2 2 2 1 Taurine catabolism dioxygenase TauD, TfdA family DnaJ PF00226.31 ORF13215 - 0.0011 19.0 0.1 0.0023 18.0 0.1 1.5 1 0 0 1 1 1 1 DnaJ domain DUF3837 PF12939.7 ORF13215 - 0.087 13.2 0.4 0.21 12.0 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3837) Cgr1 PF03879.14 ORF13215 - 2 8.8 4.6 3.5 8.0 4.6 1.4 1 0 0 1 1 1 0 Cgr1 family TIP49 PF06068.13 ORF100428 - 1.7e-158 527.5 4.9 1.7e-158 527.5 4.9 1.3 2 0 0 2 2 2 1 TIP49 P-loop domain TIP49_C PF17856.1 ORF100428 - 1.2e-27 95.8 0.6 3.4e-27 94.4 0.6 1.9 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 ORF100428 - 1.5e-09 38.4 4.0 8.5e-06 26.2 0.5 2.9 2 1 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) DnaB_C PF03796.15 ORF100428 - 2.7e-06 26.9 2.1 3.5e-06 26.5 0.9 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain RuvB_N PF05496.12 ORF100428 - 3.7e-06 26.8 0.4 0.015 15.1 0.1 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF100428 - 3.9e-05 23.9 0.1 0.088 13.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 ORF100428 - 0.00029 21.3 0.3 0.0017 18.8 0.2 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF100428 - 0.00039 20.4 0.1 0.29 11.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 ORF100428 - 0.00041 20.7 1.9 0.021 15.2 1.9 2.5 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF100428 - 0.00084 19.1 0.1 1.7 8.3 0.1 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF100428 - 0.0022 17.4 1.1 0.21 11.0 0.5 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 ORF100428 - 0.003 16.9 0.5 0.007 15.7 0.5 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_25 PF13481.6 ORF100428 - 0.0038 16.8 0.1 0.0074 15.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 ORF100428 - 0.017 14.4 0.0 0.029 13.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF100428 - 0.04 13.4 0.1 0.19 11.2 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_11 PF13086.6 ORF100428 - 0.081 12.7 1.3 0.46 10.2 1.3 2.1 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF100428 - 0.096 13.1 1.5 0.23 11.9 0.9 2.1 2 1 0 2 2 1 0 AAA domain ResIII PF04851.15 ORF100428 - 0.13 12.3 0.7 2.9 7.9 0.7 2.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit UBM PF14377.6 ORF93315 - 0.0047 16.3 3.6 0.0091 15.4 0.8 2.8 2 0 0 2 2 2 1 Ubiquitin binding region Peptidase_M20 PF01546.28 ORF86834 - 2.2e-18 66.7 0.0 3.6e-18 66.0 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF86834 - 8.3e-12 45.0 0.0 1.5e-11 44.2 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Poxvirus_B22R PF04395.12 ORF83989 - 1.2 8.6 10.8 2.2 7.8 10.8 1.4 1 0 0 1 1 1 0 Poxvirus B22R protein PI-PLC-Y PF00387.19 ORF83989 - 1.2 9.5 7.3 2.1 8.7 1.7 3.2 2 1 1 3 3 3 0 Phosphatidylinositol-specific phospholipase C, Y domain IBR PF01485.21 ORF79712 - 1.3e-08 34.9 26.0 1.8e-07 31.3 10.4 4.2 3 1 0 3 3 3 2 IBR domain, a half RING-finger domain PITH PF06201.13 ORF79712 - 1.1e-06 29.0 0.0 1.6e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 PITH domain ENTH PF01417.20 ORF69090 - 5.7e-29 100.7 0.1 1.3e-28 99.6 0.0 1.6 2 0 0 2 2 2 1 ENTH domain ANTH PF07651.16 ORF69090 - 0.0097 14.9 0.0 0.015 14.3 0.0 1.2 1 0 0 1 1 1 1 ANTH domain Alpha-amylase PF00128.24 ORF66544 - 4.5e-54 184.3 2.5 9.9e-54 183.1 2.5 1.5 1 1 0 1 1 1 1 Alpha amylase, catalytic domain GHL10 PF02638.15 ORF66544 - 0.0015 17.7 0.1 0.0044 16.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolase-like 10 DUF1971 PF09313.11 ORF66544 - 0.08 13.0 0.0 0.24 11.5 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1971) DUF1966 PF09260.11 ORF66544 - 0.16 12.3 0.2 0.42 10.9 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1966) Ion_trans PF00520.31 ORF61425 - 1.7e-08 34.0 4.7 2.3e-08 33.6 4.7 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans PF00520.31 ORF53273 - 1.7e-08 34.0 4.7 2.3e-08 33.6 4.7 1.2 1 0 0 1 1 1 1 Ion transport protein B56 PF01603.20 ORF4441 - 3.6e-126 421.5 9.9 5.2e-126 421.0 9.9 1.1 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) TFCD_C PF12612.8 ORF4441 - 0.088 12.6 0.6 2.8 7.7 0.1 2.8 2 1 1 3 3 3 0 Tubulin folding cofactor D C terminal Sec7_N PF12783.7 ORF4441 - 0.092 12.6 4.3 6.5 6.6 0.1 2.9 2 1 1 3 3 3 0 Guanine nucleotide exchange factor in Golgi transport N-terminal Laminin_G_3 PF13385.6 ORF18589 - 3.2e-06 27.4 0.3 7.8e-06 26.1 0.3 1.6 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily SMC_N PF02463.19 ORF17506 - 1.3e-05 24.8 0.4 1.5e-05 24.5 0.4 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF17506 - 1.5e-05 25.1 0.1 0.00014 22.0 0.0 2.5 1 1 1 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 ORF17506 - 3.4e-05 23.8 0.1 0.00017 21.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 ORF17506 - 0.068 12.9 1.2 0.84 9.3 1.2 2.4 1 1 1 2 2 2 0 AAA ATPase domain DUF3584 PF12128.8 ORF17506 - 0.16 9.4 38.8 0.65 7.4 38.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) DUF4392 PF14336.6 ORF17506 - 0.17 11.3 2.2 0.34 10.3 0.0 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4392) Fib_alpha PF08702.10 ORF17506 - 1.1 9.4 20.3 0.33 11.2 6.0 2.9 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family GAS PF13851.6 ORF17506 - 1.2 8.4 35.1 2.2 7.6 8.9 3.5 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding MAD PF05557.13 ORF17506 - 1.3 7.3 37.2 1 7.6 34.3 1.8 1 1 1 2 2 2 0 Mitotic checkpoint protein NPV_P10 PF05531.12 ORF17506 - 3.4 8.2 9.6 15 6.1 0.3 4.2 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF3138 PF11336.8 ORF17506 - 6 5.4 5.2 12 4.4 5.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) ABC_tran PF00005.27 ORF17506 - 6.7 7.2 7.3 2.5e+02 2.1 7.3 3.1 1 1 0 1 1 1 0 ABC transporter Csm1_N PF18504.1 ORF17506 - 8.7 6.8 31.4 0.45 10.9 5.1 5.7 2 1 3 5 5 5 0 Csm1 N-terminal domain Ion_trans PF00520.31 ORF105213 - 3.2e-11 43.0 9.6 1.5e-10 40.7 9.6 1.9 2 1 0 2 2 2 1 Ion transport protein EF-hand_6 PF13405.6 ORF105213 - 0.00036 20.2 0.3 0.08 12.9 0.0 2.8 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF105213 - 0.0018 17.7 0.6 0.07 12.7 0.1 2.7 2 0 0 2 2 2 1 EF hand Phage_holin_3_5 PF16085.5 ORF105213 - 0.034 14.3 0.3 0.1 12.8 0.3 1.8 1 0 0 1 1 1 0 Bacteriophage holin Hol, superfamily III EF-hand_5 PF13202.6 ORF105213 - 0.053 13.0 1.7 0.34 10.5 0.2 2.8 3 0 0 3 3 3 0 EF hand EF-hand_7 PF13499.6 ORF105213 - 0.08 13.4 0.2 0.19 12.2 0.2 1.6 1 0 0 1 1 1 0 EF-hand domain pair AAA PF00004.29 ORF8919 - 3.9e-18 66.1 0.0 7.4e-18 65.2 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 ORF8919 - 5.4e-07 29.2 0.4 0.00035 20.0 0.1 2.8 2 1 0 3 3 3 2 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 ORF8919 - 1.2e-05 25.1 0.1 9e-05 22.3 0.1 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 ORF8919 - 0.00016 20.8 0.6 0.0007 18.7 0.1 2.0 2 0 0 2 2 2 1 MCM P-loop domain AAA_22 PF13401.6 ORF8919 - 0.00025 21.3 0.2 0.012 15.8 0.0 2.9 2 1 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 ORF8919 - 0.00044 20.0 0.1 0.0042 16.8 0.1 2.3 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.14 ORF8919 - 0.0006 20.0 0.1 0.0011 19.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) NACHT PF05729.12 ORF8919 - 0.0007 19.5 0.1 0.016 15.1 0.1 2.4 1 1 0 1 1 1 1 NACHT domain AAA_30 PF13604.6 ORF8919 - 0.00079 19.2 0.9 0.0018 18.0 0.1 2.0 2 1 1 3 3 3 1 AAA domain AAA_5 PF07728.14 ORF8919 - 0.001 19.0 0.0 0.0029 17.6 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF8919 - 0.0042 17.5 0.3 0.013 15.8 0.1 1.9 2 1 0 2 2 2 1 AAA ATPase domain DUF2075 PF09848.9 ORF8919 - 0.014 14.7 0.1 0.23 10.6 0.1 2.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RNA_helicase PF00910.22 ORF8919 - 0.022 15.2 0.0 0.078 13.4 0.0 1.9 1 1 0 1 1 1 0 RNA helicase ResIII PF04851.15 ORF8919 - 0.029 14.4 0.2 1.8 8.6 0.1 2.3 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit HR1 PF02185.16 ORF8919 - 0.043 13.9 1.5 0.1 12.7 0.2 2.2 2 0 0 2 2 2 0 Hr1 repeat AAA_11 PF13086.6 ORF8919 - 0.049 13.4 0.2 0.12 12.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 ORF8919 - 0.054 14.0 0.0 0.14 12.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 ORF8919 - 0.079 12.1 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Sigma54_activ_2 PF14532.6 ORF8919 - 0.091 12.9 0.0 0.3 11.2 0.0 1.8 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_tran PF00005.27 ORF8919 - 0.1 13.1 0.0 0.21 12.1 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_3 PF07726.11 ORF8919 - 0.1 12.4 0.0 0.28 11.0 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 ORF8919 - 0.16 12.0 0.1 0.36 10.8 0.1 1.6 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Ank_2 PF12796.7 ORF79029 - 4.5e-105 344.4 35.9 1.1e-17 64.3 1.0 7.1 2 2 6 8 8 8 8 Ankyrin repeats (3 copies) Ank PF00023.30 ORF79029 - 2.2e-63 208.1 32.0 0.00013 22.3 0.0 14.1 12 2 2 14 14 14 14 Ankyrin repeat Ank_5 PF13857.6 ORF79029 - 2.4e-63 209.4 30.2 1.6e-07 31.4 0.2 13.1 1 1 13 14 14 14 14 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF79029 - 2.8e-59 196.7 22.9 3.8e-09 36.9 0.1 8.7 5 2 6 11 11 11 11 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF79029 - 3.4e-58 186.7 12.0 0.0035 17.7 0.0 14.1 13 1 1 14 14 14 13 Ankyrin repeat Phage_BR0599 PF09356.10 ORF79029 - 0.00016 21.9 0.4 13 6.2 0.0 4.5 4 1 0 4 4 4 2 Phage conserved hypothetical protein BR0599 Sarcoglycan_1 PF04790.13 ORF79029 - 0.18 11.1 3.8 7.1 5.9 0.3 2.4 2 1 0 2 2 2 0 Sarcoglycan complex subunit protein BNIP3 PF06553.12 ORF79029 - 0.32 10.6 4.0 32 4.1 0.1 4.2 3 2 1 4 4 4 0 BNIP3 Cyclin_N PF00134.23 ORF79029 - 0.81 9.4 2.5 54 3.5 0.3 4.4 3 1 1 4 4 4 0 Cyclin, N-terminal domain Glyco_hydro_1 PF00232.18 ORF77902 - 7.1e-156 519.1 0.2 8e-156 519.0 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Cellulase PF00150.18 ORF77902 - 0.00043 19.8 0.0 0.0008 18.9 0.0 1.4 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) DUF4038 PF13204.6 ORF77902 - 0.0011 18.7 0.1 0.0015 18.2 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4038) Albumin_I_a PF16720.5 ORF77902 - 0.0052 16.7 0.0 0.017 15.0 0.0 1.8 1 0 0 1 1 1 1 Albumin I chain a Gaa1 PF04114.14 ORF71424 - 5.3e-16 58.7 10.2 2e-12 46.9 1.1 2.5 2 1 0 2 2 2 2 Gaa1-like, GPI transamidase component Ion_trans PF00520.31 ORF70760 - 5.4e-19 68.4 19.7 8.2e-19 67.8 19.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF70760 - 4.2e-11 41.6 0.8 2.6e-06 26.6 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF70760 - 2.9e-10 39.2 0.5 1e-05 25.0 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF70760 - 1.5e-09 38.1 2.8 1e-05 25.9 0.2 2.2 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF70760 - 8.4e-09 35.1 0.4 9.4e-05 22.2 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF70760 - 2.1e-07 30.1 1.0 2.2e-05 23.7 0.2 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF70760 - 0.064 13.2 0.2 0.19 11.7 0.1 1.9 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Ion_trans PF00520.31 ORF59675 - 5.4e-19 68.4 19.7 8.2e-19 67.8 19.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF59675 - 4.2e-11 41.6 0.8 2.6e-06 26.6 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF59675 - 2.9e-10 39.2 0.5 1e-05 25.0 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF59675 - 1.5e-09 38.1 2.8 1e-05 25.9 0.2 2.2 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF59675 - 8.4e-09 35.1 0.4 9.4e-05 22.2 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF59675 - 2.1e-07 30.1 1.0 2.2e-05 23.7 0.2 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF59675 - 0.064 13.2 0.2 0.19 11.7 0.1 1.9 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand MFS_1 PF07690.16 ORF37193 - 3.5e-26 92.0 23.8 5.2e-26 91.4 23.8 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF37193 - 0.0033 16.3 7.6 0.0033 16.3 7.6 2.6 2 1 0 2 2 2 1 Sugar (and other) transporter S-AdoMet_synt_C PF02773.16 ORF2784 - 1.3e-58 196.8 0.0 2.6e-58 195.9 0.0 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 ORF2784 - 3.1e-40 137.1 0.2 1.4e-39 135.1 0.0 2.0 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 ORF2784 - 7.2e-39 132.5 1.6 4.4e-38 129.9 0.4 2.2 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 ORF2784 - 0.067 12.0 0.0 0.14 11.0 0.0 1.4 1 0 0 1 1 1 0 S-adenosylmethionine synthetase (AdoMet synthetase) Kinesin PF00225.23 ORF21911 - 0.00051 19.1 0.1 0.00051 19.1 0.1 2.8 2 1 0 2 2 2 1 Kinesin motor domain FHA PF00498.26 ORF21911 - 0.0024 18.2 0.0 0.0073 16.6 0.0 1.8 1 0 0 1 1 1 1 FHA domain Borrelia_P83 PF05262.11 ORF21911 - 0.027 13.0 29.7 0.029 12.9 24.0 2.1 2 0 0 2 2 2 0 Borrelia P83/100 protein Ndc1_Nup PF09531.10 ORF21911 - 0.45 9.1 6.8 0.59 8.7 6.8 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Hid1 PF12722.7 ORF21911 - 1.8 6.6 13.9 2.5 6.1 13.9 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein SpecificRecomb PF10136.9 ORF21911 - 4.4 5.5 7.6 6.5 4.9 7.6 1.2 1 0 0 1 1 1 0 Site-specific recombinase PMC2NT PF08066.12 ORF21911 - 5.9 7.7 13.3 0.68 10.7 0.2 3.7 2 1 1 3 3 3 0 PMC2NT (NUC016) domain Kinesin PF00225.23 ORF181 - 0.00051 19.1 0.1 0.00051 19.1 0.1 2.8 2 1 0 2 2 2 1 Kinesin motor domain FHA PF00498.26 ORF181 - 0.0024 18.2 0.0 0.0073 16.6 0.0 1.8 1 0 0 1 1 1 1 FHA domain Borrelia_P83 PF05262.11 ORF181 - 0.027 13.0 29.7 0.029 12.9 24.0 2.1 2 0 0 2 2 2 0 Borrelia P83/100 protein Ndc1_Nup PF09531.10 ORF181 - 0.45 9.1 6.8 0.59 8.7 6.8 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Hid1 PF12722.7 ORF181 - 1.8 6.6 13.9 2.5 6.1 13.9 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein SpecificRecomb PF10136.9 ORF181 - 4.4 5.5 7.6 6.5 4.9 7.6 1.2 1 0 0 1 1 1 0 Site-specific recombinase PMC2NT PF08066.12 ORF181 - 5.9 7.7 13.3 0.68 10.7 0.2 3.7 2 1 1 3 3 3 0 PMC2NT (NUC016) domain Fe-ADH PF00465.19 ORF13319 - 2.5e-119 398.3 6.0 3.1e-119 398.0 6.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 ORF13319 - 8.2e-16 58.5 8.3 3.8e-10 39.9 0.1 2.5 3 0 0 3 3 3 2 Iron-containing alcohol dehydrogenase Peripla_BP_6 PF13458.6 ORF13319 - 0.0014 18.4 0.1 0.0029 17.3 0.1 1.5 1 0 0 1 1 1 1 Periplasmic binding protein Ion_trans PF00520.31 ORF112036 - 5.4e-19 68.4 19.7 8.2e-19 67.8 19.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF112036 - 4.2e-11 41.6 0.8 2.6e-06 26.6 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF112036 - 2.9e-10 39.2 0.5 1e-05 25.0 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF112036 - 1.5e-09 38.1 2.8 1e-05 25.9 0.2 2.2 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF112036 - 8.4e-09 35.1 0.4 9.4e-05 22.2 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF112036 - 2.1e-07 30.1 1.0 2.2e-05 23.7 0.2 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF112036 - 0.064 13.2 0.2 0.19 11.7 0.1 1.9 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Cpn60_TCP1 PF00118.24 ORF108237 - 2.1e-130 435.6 6.8 2.4e-130 435.5 6.8 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF16 PF01519.16 ORF103506 - 1.5 9.3 16.0 0.37 11.3 0.2 3.9 3 1 0 3 3 3 0 Protein of unknown function DUF16 Cep57_CLD_2 PF14197.6 ORF103506 - 2.1 8.5 10.1 8.3 6.6 0.0 3.9 4 0 0 4 4 4 0 Centrosome localisation domain of PPC89 Enolase_C PF00113.22 ORF101692 - 6.4e-140 465.5 0.0 8.2e-140 465.2 0.0 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 ORF101692 - 2.7e-57 192.5 0.1 5.5e-57 191.6 0.1 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 ORF101692 - 1.4e-06 28.0 0.0 2.2e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 ORF101692 - 0.0009 18.5 0.1 0.0016 17.6 0.1 1.3 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus Ribosomal_L12_N PF16320.5 ORF101692 - 0.045 13.5 3.2 0.91 9.3 0.0 3.3 3 0 0 3 3 3 0 Ribosomal protein L7/L12 dimerisation domain ArlS_N PF18719.1 NODE_9717_length_1391_cov_73.707227_g7145_i0reverse_frame_3 - 0.007 16.6 1.2 0.015 15.5 1.2 1.5 1 0 0 1 1 1 1 ArlS sensor domain DUF588 PF04535.12 NODE_9717_length_1391_cov_73.707227_g7145_i0reverse_frame_3 - 2 8.2 6.0 8.5 6.2 0.2 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF588) Bac_export_2 PF01312.19 NODE_9717_length_1391_cov_73.707227_g7145_i0reverse_frame_2 - 7.5 5.7 6.9 7.4 5.7 0.4 2.3 2 0 0 2 2 2 0 FlhB HrpN YscU SpaS Family DUF2420 PF10336.9 ORF97045 - 0.0011 18.9 0.8 0.0041 17.1 0.4 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2420) Pyr_redox_2 PF07992.14 ORF9244 - 1.6e-16 60.4 0.0 4.1e-16 59.1 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF9244 - 1.4e-11 44.8 0.0 1e-08 35.6 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF9244 - 0.0087 15.7 0.1 0.35 10.4 0.0 2.7 2 1 1 3 3 3 1 FAD dependent oxidoreductase DUF1188 PF06690.11 ORF9244 - 0.13 11.8 0.0 11 5.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1188) UDPG_MGDP_dh_N PF03721.14 ORF91783 - 2.9e-52 177.0 0.1 7.4e-52 175.6 0.1 1.7 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 ORF91783 - 3.2e-33 114.3 0.1 3.8e-32 110.8 0.1 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 ORF91783 - 6.2e-32 109.7 0.0 1.3e-31 108.6 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 ORF91783 - 0.0019 18.4 0.1 0.086 13.0 0.1 2.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Ycf54 PF10674.9 ORF91783 - 0.12 12.6 0.0 2.2 8.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2488) DUF2420 PF10336.9 ORF91447 - 0.0011 18.9 0.8 0.0041 17.1 0.4 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2420) Pex26 PF07163.12 ORF89178 - 0.00066 19.1 0.0 0.0016 17.8 0.0 1.6 1 0 0 1 1 1 1 Pex26 protein DUF5572 PF17733.1 ORF89178 - 0.042 13.7 0.5 2.4 8.1 0.0 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5572) Eco57I PF07669.11 ORF89178 - 0.51 10.9 4.5 38 4.9 0.2 3.5 2 1 0 3 3 3 0 Eco57I restriction-modification methylase UDPG_MGDP_dh_N PF03721.14 ORF73464 - 2.9e-52 177.0 0.1 7.4e-52 175.6 0.1 1.7 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 ORF73464 - 3.2e-33 114.3 0.1 3.8e-32 110.8 0.1 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 ORF73464 - 6.2e-32 109.7 0.0 1.3e-31 108.6 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 ORF73464 - 0.0019 18.4 0.1 0.086 13.0 0.1 2.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Ycf54 PF10674.9 ORF73464 - 0.12 12.6 0.0 2.2 8.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2488) Pyr_redox_2 PF07992.14 ORF66824 - 1.6e-16 60.4 0.0 4.1e-16 59.1 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF66824 - 1.4e-11 44.8 0.0 1e-08 35.6 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF66824 - 0.0087 15.7 0.1 0.35 10.4 0.0 2.7 2 1 1 3 3 3 1 FAD dependent oxidoreductase DUF1188 PF06690.11 ORF66824 - 0.13 11.8 0.0 11 5.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1188) Dna2 PF08696.11 ORF66103 - 0.0083 16.0 0.5 0.35 10.7 0.5 2.2 2 0 0 2 2 2 1 DNA replication factor Dna2 DUF1690 PF07956.11 ORF66103 - 7 7.1 8.9 0.42 11.0 1.2 2.3 1 1 1 2 2 2 0 Protein of Unknown function (DUF1690) Peptidase_S28 PF05577.12 ORF30238 - 6.3e-82 275.7 4.9 1.8e-81 274.2 4.9 1.6 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF30238 - 0.1 12.1 0.0 0.29 10.6 0.0 1.7 2 0 0 2 2 2 0 Prolyl oligopeptidase family Hydrolase PF00702.26 ORF27594 - 1.5e-49 169.1 6.5 2.3e-49 168.6 6.5 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 ORF27594 - 1.8e-34 118.9 1.8 1.8e-34 118.9 1.8 2.0 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF27594 - 1.4e-09 38.1 1.1 2.4e-06 27.5 0.8 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF27594 - 2.3e-05 24.9 0.2 0.00021 21.8 0.1 2.5 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase CstA_5TM PF13722.6 ORF27594 - 0.0059 17.0 5.7 0.023 15.0 0.4 2.3 2 0 0 2 2 2 1 5TM C-terminal transporter carbon starvation CstA HAD_2 PF13419.6 ORF27594 - 0.0087 16.2 0.1 0.051 13.7 0.1 2.0 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase DUF983 PF06170.12 ORF27594 - 1 9.8 5.6 2.7 8.4 5.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF983) DNA_methylase PF00145.17 ORF25518 - 5.9e-13 48.9 0.0 1.2e-12 47.9 0.0 1.5 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Peptidase_S28 PF05577.12 ORF25077 - 6.3e-82 275.7 4.9 1.8e-81 274.2 4.9 1.6 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF25077 - 0.1 12.1 0.0 0.29 10.6 0.0 1.7 2 0 0 2 2 2 0 Prolyl oligopeptidase family Dna2 PF08696.11 ORF11716 - 0.0083 16.0 0.5 0.35 10.7 0.5 2.2 2 0 0 2 2 2 1 DNA replication factor Dna2 DUF1690 PF07956.11 ORF11716 - 7 7.1 8.9 0.42 11.0 1.2 2.3 1 1 1 2 2 2 0 Protein of Unknown function (DUF1690) UDPG_MGDP_dh_N PF03721.14 ORF107356 - 2.9e-52 177.0 0.1 7.4e-52 175.6 0.1 1.7 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 ORF107356 - 3.2e-33 114.3 0.1 3.8e-32 110.8 0.1 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 ORF107356 - 6.2e-32 109.7 0.0 1.3e-31 108.6 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 ORF107356 - 0.0019 18.4 0.1 0.086 13.0 0.1 2.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Ycf54 PF10674.9 ORF107356 - 0.12 12.6 0.0 2.2 8.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2488) ANTH PF07651.16 ORF104993 - 0.052 12.5 1.5 0.082 11.9 1.5 1.2 1 0 0 1 1 1 0 ANTH domain SIR2 PF02146.17 ORF104453 - 6.9e-44 149.9 0.0 1e-43 149.4 0.0 1.2 1 0 0 1 1 1 1 Sir2 family Ank_5 PF13857.6 ORF104453 - 3.9e-12 46.1 0.1 1.5e-06 28.4 0.0 2.8 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF104453 - 1.1e-09 38.7 0.0 8.6e-05 23.1 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF104453 - 2e-09 37.8 0.0 0.0046 17.5 0.0 3.0 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF104453 - 1e-07 31.6 0.2 0.0012 19.1 0.0 4.3 4 0 0 4 4 4 2 Ankyrin repeat Ank PF00023.30 ORF104453 - 8.9e-07 29.1 1.5 0.0041 17.5 0.0 4.3 4 0 0 4 4 4 2 Ankyrin repeat PNTB PF02233.16 ORF91268 - 2.2e-203 676.4 19.6 2.4e-203 676.2 19.6 1.0 1 0 0 1 1 1 1 NAD(P) transhydrogenase beta subunit AA_kinase PF00696.28 ORF91268 - 0.0083 15.7 0.0 0.018 14.6 0.0 1.5 2 0 0 2 2 2 1 Amino acid kinase family TPP_enzyme_M PF00205.22 ORF91268 - 0.011 15.4 1.2 0.062 13.0 0.1 2.7 2 1 1 3 3 3 0 Thiamine pyrophosphate enzyme, central domain ATG16 PF08614.11 ORF81070 - 0.0011 19.2 22.7 0.0011 19.2 22.7 1.9 2 1 0 2 2 2 1 Autophagy protein 16 (ATG16) PHD PF00628.29 ORF81070 - 0.003 17.4 6.6 0.045 13.7 5.3 2.7 2 0 0 2 2 2 1 PHD-finger SlyX PF04102.12 ORF81070 - 0.0069 17.0 1.7 0.0069 17.0 1.7 3.8 2 1 2 4 4 4 1 SlyX TMF_DNA_bd PF12329.8 ORF81070 - 0.011 15.7 13.4 0.011 15.7 13.4 4.0 2 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 ORF81070 - 0.025 14.3 1.7 0.025 14.3 1.7 4.1 1 1 2 3 3 3 0 Septum formation initiator BBP1_C PF15272.6 ORF81070 - 0.061 13.1 40.9 0.18 11.7 20.7 3.0 1 1 1 2 2 2 0 Spindle pole body component BBP1, C-terminal PHD_2 PF13831.6 ORF81070 - 0.067 12.8 3.2 0.15 11.6 3.2 1.6 1 0 0 1 1 1 0 PHD-finger ZYG-11_interact PF05884.12 ORF81070 - 0.38 10.1 5.2 0.79 9.1 5.2 1.6 1 0 0 1 1 1 0 Interactor of ZYG-11 zf-B_box PF00643.24 ORF81070 - 0.45 10.7 14.6 0.1 12.8 10.4 2.0 2 0 0 2 2 2 0 B-box zinc finger CALCOCO1 PF07888.11 ORF81070 - 3.7 6.3 36.2 3.2 6.5 35.0 1.4 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Golgin_A5 PF09787.9 ORF81070 - 6.6 6.1 37.0 9.8 5.5 36.6 1.4 1 1 0 1 1 1 0 Golgin subfamily A member 5 Spc7 PF08317.11 ORF81070 - 8.5 5.2 40.9 4 6.2 13.6 2.4 1 1 1 2 2 2 0 Spc7 kinetochore protein ATG16 PF08614.11 ORF7616 - 0.0011 19.2 22.7 0.0011 19.2 22.7 1.9 2 1 0 2 2 2 1 Autophagy protein 16 (ATG16) PHD PF00628.29 ORF7616 - 0.0038 17.1 7.2 0.06 13.2 5.8 2.7 2 0 0 2 2 2 1 PHD-finger SlyX PF04102.12 ORF7616 - 0.0069 17.0 1.7 0.0069 17.0 1.7 3.8 2 1 2 4 4 4 1 SlyX TMF_DNA_bd PF12329.8 ORF7616 - 0.011 15.7 13.4 0.011 15.7 13.4 4.0 2 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 ORF7616 - 0.025 14.3 1.7 0.025 14.3 1.7 4.1 1 1 2 3 3 3 0 Septum formation initiator BBP1_C PF15272.6 ORF7616 - 0.061 13.1 40.9 0.18 11.7 20.7 3.0 1 1 1 2 2 2 0 Spindle pole body component BBP1, C-terminal ZYG-11_interact PF05884.12 ORF7616 - 0.38 10.1 5.2 0.79 9.1 5.2 1.6 1 0 0 1 1 1 0 Interactor of ZYG-11 zf-B_box PF00643.24 ORF7616 - 0.4 10.9 15.5 0.092 12.9 11.3 2.0 2 0 0 2 2 2 0 B-box zinc finger PHD_2 PF13831.6 ORF7616 - 1.4 8.5 6.9 0.34 10.5 3.4 1.8 2 0 0 2 2 2 0 PHD-finger CALCOCO1 PF07888.11 ORF7616 - 3.7 6.3 36.2 3.2 6.5 35.0 1.4 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Golgin_A5 PF09787.9 ORF7616 - 6.6 6.1 37.0 9.8 5.5 36.6 1.4 1 1 0 1 1 1 0 Golgin subfamily A member 5 Spc7 PF08317.11 ORF7616 - 8.4 5.2 40.9 4 6.2 13.6 2.4 1 1 1 2 2 2 0 Spc7 kinetochore protein WD40 PF00400.32 ORF75704 - 7.6e-22 77.2 14.6 0.00019 22.1 0.1 7.2 7 0 0 7 7 7 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF75704 - 2.1e-06 27.9 2.9 0.013 15.8 0.0 4.8 5 1 1 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF75704 - 0.0023 17.8 1.4 0.2 11.6 0.1 3.2 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Ricin_B_lectin PF00652.22 ORF75704 - 0.055 13.7 3.4 0.058 13.7 1.6 2.0 1 1 0 1 1 1 0 Ricin-type beta-trefoil lectin domain MFS_1 PF07690.16 ORF71449 - 3.1e-17 62.5 41.3 3e-11 42.9 14.9 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_5 PF05631.14 ORF71449 - 0.015 14.3 0.5 0.027 13.4 0.5 1.4 1 0 0 1 1 1 0 Sugar-tranasporters, 12 TM ATP11 PF06644.11 ORF59394 - 0.013 15.3 8.4 0.025 14.4 8.4 1.4 1 0 0 1 1 1 0 ATP11 protein DUF1104 PF06518.11 ORF59394 - 0.12 12.7 11.8 0.38 11.2 11.8 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) Hexapep PF00132.24 ORF59394 - 0.18 11.6 0.1 0.38 10.6 0.1 1.6 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) DUF2120 PF09893.9 ORF59394 - 1 9.5 12.2 37 4.4 0.0 3.1 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) DUF4358 PF14270.6 ORF59394 - 1.7 9.0 8.1 0.41 11.0 1.7 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4358) DUF883 PF05957.13 ORF59394 - 2 9.1 5.7 4.7 7.9 5.7 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Z1 PF10593.9 ORF59394 - 7.2 6.0 10.4 1.6 8.2 3.6 2.4 2 1 0 2 2 2 0 Z1 domain HET PF06985.11 ORF43277 - 0.038 14.4 0.1 0.079 13.3 0.1 1.5 1 0 0 1 1 1 0 Heterokaryon incompatibility protein (HET) Ion_trans PF00520.31 ORF39272 - 3.5e-17 62.4 11.2 4.4e-17 62.1 11.2 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF39272 - 0.00018 20.8 0.0 0.00046 19.5 0.0 1.7 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF39272 - 0.0045 16.8 0.0 0.013 15.4 0.0 1.8 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF39272 - 0.058 12.9 0.0 0.14 11.7 0.0 1.7 1 0 0 1 1 1 0 EF hand DUF389 PF04087.14 ORF39272 - 0.07 13.2 0.9 0.72 9.9 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF389) HSP70 PF00012.20 ORF38867 - 4.9e-201 669.0 1.7 5.9e-201 668.8 1.7 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF38867 - 1.3e-16 60.4 0.1 1.8e-16 59.8 0.1 1.1 1 0 0 1 1 1 1 MreB/Mbl protein FGGY_C PF02782.16 ORF38867 - 0.0041 16.9 0.0 0.0079 15.9 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Spore_GerAC PF05504.11 ORF38867 - 0.013 15.7 1.7 0.2 11.9 0.0 2.7 3 0 0 3 3 3 0 Spore germination B3/ GerAC like, C-terminal DDR PF08841.10 ORF38867 - 0.019 14.0 0.3 0.16 10.9 0.1 2.2 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Adaptin_N PF01602.20 ORF38699 - 3.4e-20 72.1 0.0 4.3e-20 71.8 0.0 1.1 1 0 0 1 1 1 1 Adaptin N terminal region B2-adapt-app_C PF09066.10 ORF38699 - 3.5e-19 68.9 0.0 6.8e-19 68.0 0.0 1.5 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain Alpha_adaptinC2 PF02883.20 ORF38699 - 0.014 15.7 0.1 0.034 14.4 0.1 1.8 1 0 0 1 1 1 0 Adaptin C-terminal domain CheY-binding PF09078.11 ORF38699 - 0.057 13.6 0.2 0.12 12.5 0.2 1.6 1 0 0 1 1 1 0 CheY binding PAS_5 PF07310.13 ORF36343 - 0.15 11.8 0.1 0.45 10.3 0.0 1.7 2 0 0 2 2 2 0 PAS domain FAD_binding_7 PF03441.14 ORF32782 - 6.4e-41 140.1 1.9 3.4e-40 137.7 0.2 2.2 2 0 0 2 2 2 1 FAD binding domain of DNA photolyase DUF1039 PF06287.11 ORF32782 - 0.1 13.1 0.1 0.21 12.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1039) UBA PF00627.31 ORF32782 - 0.17 11.8 0.1 0.31 11.0 0.1 1.5 1 0 0 1 1 1 0 UBA/TS-N domain Ion_trans PF00520.31 ORF2952 - 1.5e-23 83.4 11.8 2e-23 82.9 11.8 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF2952 - 7.1e-09 34.9 0.7 0.00058 19.6 0.1 3.0 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF2952 - 2.7e-07 29.6 1.7 0.0031 17.0 0.2 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF2952 - 5.5e-07 29.9 0.4 1.1e-06 28.9 0.4 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF2952 - 6.7e-06 25.9 1.2 0.031 14.1 0.1 2.7 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF2952 - 1.4e-05 24.4 1.0 0.00021 20.6 0.1 2.5 2 0 0 2 2 2 1 EF hand DUF5090 PF17009.5 ORF2952 - 0.21 11.5 2.1 0.43 10.5 2.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) PA PF02225.22 ORF20838 - 2e-05 24.5 0.0 6.3e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 PA domain Metallophos PF00149.28 ORF15112 - 3.6e-06 27.6 0.2 6.2e-06 26.9 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF456 PF04306.13 ORF15112 - 0.018 15.3 5.1 0.032 14.5 5.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF456) ECF_trnsprt PF12822.7 ORF15112 - 0.074 13.1 0.4 0.12 12.4 0.0 1.5 2 0 0 2 2 2 0 ECF transporter, substrate-specific component TMEM144 PF07857.12 ORF15112 - 0.093 11.7 0.2 0.14 11.1 0.2 1.2 1 0 0 1 1 1 0 Transmembrane family, TMEM144 of transporters DUF2613 PF11021.8 ORF15112 - 0.33 11.1 1.7 30 4.8 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) ATPase_gene1 PF09527.10 ORF15112 - 1.5 9.1 9.3 7.4 6.8 9.3 2.1 1 1 0 1 1 1 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter BPD_transp_1 PF00528.22 ORF99375 - 1.4e-22 80.4 13.7 1.4e-22 80.4 13.7 2.3 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component DUF3333 PF11812.8 ORF99375 - 0.06 13.6 0.4 0.06 13.6 0.4 2.5 3 1 0 3 3 3 0 Domain of unknown function (DUF3333) DUF2116 PF09889.9 ORF99375 - 0.16 11.9 2.1 0.74 9.8 0.7 2.5 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2976 PF11190.8 ORF99375 - 0.9 9.4 4.2 6.7 6.6 0.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2976) TPR_1 PF00515.28 ORF95722 - 0.0011 18.8 0.1 0.0029 17.4 0.1 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF95722 - 0.0094 16.1 0.6 0.3 11.4 0.1 3.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF95722 - 0.027 14.6 0.7 0.099 12.8 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF95722 - 0.048 13.5 0.1 0.72 9.8 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat ERCC4 PF02732.15 ORF72743 - 1e-18 68.0 0.0 2.3e-18 66.9 0.0 1.6 2 0 0 2 2 2 1 ERCC4 domain SBF PF01758.16 ORF7214 - 1.4e-38 132.6 15.9 1.4e-38 132.6 15.9 1.7 2 0 0 2 2 2 1 Sodium Bile acid symporter family SBF_like PF13593.6 ORF7214 - 5.1e-15 55.6 21.5 7.2e-15 55.1 21.5 1.2 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) DUF267 PF03268.14 ORF7214 - 0.085 11.7 4.5 0.31 9.9 2.6 2.2 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF267 AA_permease PF00324.21 ORF6543 - 2.4e-103 346.3 54.7 3e-103 346.0 54.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF6543 - 1e-40 139.9 58.5 1.4e-40 139.5 58.5 1.0 1 0 0 1 1 1 1 Amino acid permease RRM_1 PF00076.22 ORF54290 - 1.3e-10 41.0 0.0 5.4e-06 26.1 0.0 3.9 4 1 0 4 4 4 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TolA_bind_tri PF16331.5 ORF53732 - 0.032 14.3 0.1 0.065 13.3 0.1 1.4 1 0 0 1 1 1 0 TolA binding protein trimerisation GrpE PF01025.19 ORF53732 - 0.31 10.7 1.4 0.53 9.9 1.4 1.3 1 0 0 1 1 1 0 GrpE Gluconate_2-dh3 PF13618.6 ORF41541 - 4.1 7.6 8.6 0.77 10.0 0.7 2.7 2 1 0 2 2 2 0 Gluconate 2-dehydrogenase subunit 3 T2SSE PF00437.20 ORF37359 - 8.6e-88 293.9 0.7 1.2e-87 293.5 0.7 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein T2SSE_N PF05157.15 ORF37359 - 1.3e-05 25.4 0.0 3.9e-05 23.9 0.0 1.8 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein E, N-terminal domain AAA_16 PF13191.6 ORF37359 - 0.00023 21.6 0.4 0.00088 19.7 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_7 PF12775.7 ORF37359 - 0.00029 20.4 0.0 0.0034 16.9 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_30 PF13604.6 ORF37359 - 0.0011 18.7 0.0 0.0037 17.0 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 ORF37359 - 0.0031 17.8 0.9 0.012 15.8 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_11 PF13086.6 ORF37359 - 0.011 15.5 0.0 0.023 14.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF37359 - 0.021 14.9 0.0 0.06 13.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 ORF37359 - 0.022 14.5 0.0 0.054 13.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_19 PF13245.6 ORF37359 - 0.031 14.6 0.2 0.1 12.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ResIII PF04851.15 ORF37359 - 0.039 14.0 0.0 0.073 13.1 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit PhoH PF02562.16 ORF37359 - 0.053 13.0 0.1 0.46 9.9 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_23 PF13476.6 ORF37359 - 0.082 13.4 0.0 0.17 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF37359 - 0.086 13.3 0.0 0.18 12.2 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 ORF37359 - 0.11 11.7 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NTPase_1 PF03266.15 ORF37359 - 0.12 12.3 0.2 0.74 9.7 0.1 2.3 2 0 0 2 2 2 0 NTPase DUF3449 PF11931.8 ORF35087 - 2.4e-75 252.4 1.4 2.4e-75 252.4 1.4 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF3449) SF3A3 PF16837.5 ORF35087 - 5.5e-21 74.9 3.3 2.1e-20 73.0 3.3 2.0 1 1 0 1 1 1 1 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 SF3a60_bindingd PF12108.8 ORF35087 - 1e-08 34.9 0.1 1e-08 34.9 0.1 2.3 2 0 0 2 2 2 1 Splicing factor SF3a60 binding domain TMCO5 PF14992.6 ORF35087 - 0.003 17.2 1.6 0.003 17.2 1.6 1.9 2 0 0 2 2 2 1 TMCO5 family Desulfoferrod_N PF06397.12 ORF35087 - 0.33 10.6 1.5 0.63 9.7 1.5 1.3 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain TFR_dimer PF04253.15 ORF21690 - 3.8e-27 94.8 0.0 5.9e-27 94.2 0.0 1.3 1 0 0 1 1 1 1 Transferrin receptor-like dimerisation domain Peptidase_M28 PF04389.17 ORF21690 - 6.7e-20 71.6 0.0 9.7e-20 71.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M28 mTERF PF02536.14 ORF21690 - 0.023 13.6 0.0 0.035 13.0 0.0 1.1 1 0 0 1 1 1 0 mTERF Peptidase_M20 PF01546.28 ORF21690 - 0.14 11.8 0.0 1 9.0 0.0 2.0 1 1 0 1 1 1 0 Peptidase family M20/M25/M40 DUF2092 PF09865.9 ORF21690 - 0.22 10.8 0.1 0.36 10.1 0.1 1.2 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2092) TolA_bind_tri PF16331.5 ORF14579 - 0.032 14.3 0.1 0.065 13.3 0.1 1.4 1 0 0 1 1 1 0 TolA binding protein trimerisation GrpE PF01025.19 ORF14579 - 0.31 10.7 1.4 0.53 9.9 1.4 1.3 1 0 0 1 1 1 0 GrpE zf-CCHC_4 PF14392.6 ORF14400 - 0.0011 18.6 6.9 0.056 13.2 0.2 3.3 3 0 0 3 3 3 2 Zinc knuckle zf-CCHC PF00098.23 ORF14400 - 0.028 14.5 10.1 0.044 13.9 0.5 3.7 3 0 0 3 3 3 0 Zinc knuckle IBR PF01485.21 ORF14400 - 3.1 8.1 5.9 35 4.7 0.1 3.3 3 0 0 3 3 3 0 IBR domain, a half RING-finger domain YhfH PF14149.6 ORF14400 - 5.2 7.1 8.5 1.5 8.9 0.3 2.7 3 0 0 3 3 3 0 YhfH-like protein Amidohydro_1 PF01979.20 ORF1049 - 5.2e-21 75.3 0.0 9.4e-21 74.5 0.0 1.4 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF1049 - 2.3e-12 47.1 0.1 1.9e-05 24.3 0.1 3.0 3 0 0 3 3 3 2 Amidohydrolase family SlyX PF04102.12 ORF100523 - 0.27 11.9 5.5 16 6.2 0.0 3.9 3 1 0 3 3 3 0 SlyX V_ATPase_I PF01496.19 ORF95689 - 0.065 11.1 1.3 0.091 10.7 1.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Thioredoxin_3 PF13192.6 ORF95689 - 0.09 12.8 1.7 0.23 11.5 0.0 2.4 2 0 0 2 2 2 0 Thioredoxin domain Uds1 PF15456.6 ORF95689 - 0.18 11.9 8.5 0.5 10.5 8.5 1.7 1 0 0 1 1 1 0 Up-regulated During Septation HAUS6_N PF14661.6 ORF95689 - 0.2 11.2 2.4 0.31 10.6 2.4 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Selenoprotein_S PF06936.11 ORF95689 - 0.37 10.6 3.5 0.65 9.8 3.5 1.3 1 0 0 1 1 1 0 Selenoprotein S (SelS) PKcGMP_CC PF16808.5 ORF95689 - 1.1 9.1 5.4 2.7 7.9 5.4 1.6 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase AAA_23 PF13476.6 ORF95689 - 1.3 9.5 7.5 2.4 8.6 7.5 1.4 1 0 0 1 1 1 0 AAA domain Prominin PF05478.11 ORF95689 - 3.2 5.6 4.1 4.2 5.2 4.1 1.1 1 0 0 1 1 1 0 Prominin Amidohydro_3 PF07969.11 ORF77609 - 2.5e-15 56.9 0.5 1.8e-10 40.9 0.1 2.1 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 ORF77609 - 1.1e-07 31.6 0.0 1.6e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family HTH_ParB PF17762.1 ORF77609 - 0.043 13.6 0.1 0.094 12.5 0.1 1.6 1 0 0 1 1 1 0 HTH domain found in ParB protein Acyl_transf_3 PF01757.22 ORF67826 - 2e-15 56.7 34.7 2e-15 56.7 34.7 1.7 2 0 0 2 2 2 1 Acyltransferase family ATP-synt_ab PF00006.25 ORF6508 - 1.3e-63 214.5 0.0 1.8e-63 214.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 ORF6508 - 1.2e-20 73.7 2.5 2.8e-20 72.6 2.5 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain T3SS_ATPase_C PF18269.1 ORF6508 - 0.017 15.0 0.4 0.1 12.5 0.4 2.1 1 1 0 1 1 1 0 T3SS EscN ATPase C-terminal domain WD40 PF00400.32 ORF51738 - 4.4e-26 90.6 20.3 0.00019 22.2 0.1 7.2 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF51738 - 2.8e-06 27.5 3.6 0.013 15.8 0.0 4.8 5 1 1 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF51738 - 0.0023 17.8 1.4 0.2 11.6 0.1 3.2 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Ricin_B_lectin PF00652.22 ORF51738 - 0.068 13.4 3.5 0.059 13.6 1.6 1.9 1 1 0 1 1 1 0 Ricin-type beta-trefoil lectin domain DUF2140 PF09911.9 ORF20976 - 0.044 13.3 1.4 0.12 11.9 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) MORN PF02493.20 ORF63905 - 1.1e-46 154.0 81.0 1.9e-06 27.4 3.2 10.6 10 0 0 10 10 10 10 MORN repeat COMMD1_N PF17221.3 ORF63905 - 0.057 13.7 0.1 0.11 12.8 0.1 1.4 1 0 0 1 1 1 0 COMMD1 N-terminal domain DUF1664 PF07889.12 ORF24343 - 0.00037 20.5 1.1 0.00037 20.5 1.1 5.2 2 2 3 5 5 5 1 Protein of unknown function (DUF1664) zf-RING_UBOX PF13445.6 ORF24343 - 0.034 14.2 2.5 0.07 13.2 2.5 1.5 1 0 0 1 1 1 0 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF24343 - 0.058 13.3 1.9 0.18 11.7 1.9 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) PKcGMP_CC PF16808.5 ORF24343 - 1.7 8.6 14.7 2.5 8.0 0.4 4.6 4 0 0 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase zf-RING_5 PF14634.6 ORF24343 - 3.1 7.8 7.6 39 4.3 1.5 2.4 1 1 1 2 2 2 0 zinc-RING finger domain ATG16 PF08614.11 ORF24343 - 6 7.0 48.9 3.5 7.8 18.3 3.8 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Ammonium_transp PF00909.21 ORF24208 - 4.5e-96 322.0 30.7 5.2e-96 321.8 30.7 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Choline_transpo PF04515.12 ORF16445 - 3.1e-30 105.5 10.2 4e-30 105.1 10.2 1.0 1 0 0 1 1 1 1 Plasma-membrane choline transporter PAN_4 PF14295.6 ORF1374 - 0.00025 20.9 3.2 0.00025 20.9 3.2 2.6 2 1 1 3 3 3 1 PAN domain PAN_1 PF00024.26 ORF1374 - 0.0042 17.0 1.9 0.0093 15.9 1.9 1.6 1 0 0 1 1 1 1 PAN domain MORN PF02493.20 ORF12084 - 1.1e-46 154.0 81.0 1.9e-06 27.4 3.2 10.6 10 0 0 10 10 10 10 MORN repeat COMMD1_N PF17221.3 ORF12084 - 0.057 13.7 0.1 0.11 12.8 0.1 1.4 1 0 0 1 1 1 0 COMMD1 N-terminal domain Hydrolase PF00702.26 ORF101608 - 7.1e-27 95.1 1.1 1e-26 94.6 1.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 ORF101608 - 1.7e-12 47.2 1.8 1.7e-12 47.2 1.8 1.8 2 0 0 2 2 2 1 E1-E2 ATPase HAD PF12710.7 ORF101608 - 0.032 14.6 0.0 0.14 12.5 0.0 1.9 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF101608 - 0.053 13.3 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase zf-B_box PF00643.24 NODE_10024_length_1372_cov_288.377711_g6415_i1forward_frame_1 - 0.0032 17.6 2.4 0.0032 17.6 2.4 2.6 2 0 0 2 2 2 1 B-box zinc finger HTH_19 PF12844.7 NODE_10024_length_1372_cov_288.377711_g6415_i1forward_frame_1 - 0.3 11.1 4.5 0.96 9.5 0.8 2.9 2 1 0 2 2 2 0 Helix-turn-helix domain zf-UBP PF02148.19 ORF89335 - 3.2e-13 49.8 2.4 7.4e-13 48.6 2.4 1.6 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein SIR2 PF02146.17 ORF89335 - 1.4e-08 34.9 0.5 0.0001 22.3 0.0 3.0 2 1 1 3 3 3 2 Sir2 family Enolase_C PF00113.22 ORF89297 - 7.8e-143 475.1 0.1 1e-142 474.7 0.1 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 ORF89297 - 2.7e-52 176.4 0.1 5.3e-52 175.4 0.1 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 ORF89297 - 3.4e-06 26.8 0.0 6e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 ORF89297 - 0.00011 21.4 0.0 0.00023 20.4 0.0 1.4 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus ALAD PF00490.21 ORF83090 - 3.8e-133 443.6 0.6 9.6e-133 442.2 0.0 1.7 2 0 0 2 2 2 1 Delta-aminolevulinic acid dehydratase MMR_HSR1 PF01926.23 ORF78957 - 3.4e-16 59.3 0.0 6.2e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 ORF78957 - 8.4e-07 29.2 1.6 0.025 14.6 0.2 2.8 2 1 1 3 3 3 2 Dynamin family RsgA_GTPase PF03193.16 ORF78957 - 3.3e-06 27.1 0.0 0.068 13.1 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 ORF78957 - 0.00077 19.0 0.0 0.0023 17.5 0.0 1.8 1 1 0 1 1 1 1 Ferrous iron transport protein B Septin PF00735.18 ORF78957 - 0.0012 18.2 0.0 0.0018 17.6 0.0 1.2 1 0 0 1 1 1 1 Septin Gtr1_RagA PF04670.12 ORF78957 - 0.0012 18.2 0.0 0.0022 17.4 0.0 1.4 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF78957 - 0.0015 18.1 0.0 1.2 8.6 0.0 2.5 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain AIG1 PF04548.16 ORF78957 - 0.0016 17.8 0.0 0.0032 16.8 0.0 1.6 1 0 0 1 1 1 1 AIG1 family PEPcase_2 PF14010.6 ORF78957 - 0.0037 15.8 0.0 0.0061 15.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase AAA_29 PF13555.6 ORF78957 - 0.0083 15.8 0.0 0.02 14.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SRPRB PF09439.10 ORF78957 - 0.0084 15.6 0.0 0.021 14.3 0.0 1.8 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit FtsK_SpoIIIE PF01580.18 ORF78957 - 0.015 14.7 0.0 0.031 13.6 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family PPR_2 PF13041.6 ORF78957 - 0.018 15.2 0.0 0.052 13.7 0.0 1.8 1 0 0 1 1 1 0 PPR repeat family MMR_HSR1_Xtn PF16897.5 ORF78957 - 0.036 14.1 0.0 0.07 13.1 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain AAA_15 PF13175.6 ORF78957 - 0.041 13.6 0.0 0.07 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 ORF78957 - 0.065 13.7 4.3 0.22 12.0 4.3 2.0 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF78957 - 0.079 12.5 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Helicase_C PF00271.31 ORF73038 - 1.3e-19 70.6 0.0 3.7e-19 69.1 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Bestrophin PF01062.21 ORF72179 - 1.4e-22 80.5 0.0 1.9e-22 80.0 0.0 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Tfb4 PF03850.14 ORF70474 - 1.7 8.1 10.7 14 5.1 1.9 3.4 3 0 0 3 3 3 0 Transcription factor Tfb4 CS PF04969.16 ORF56016 - 0.00061 20.7 0.1 0.68 11.0 0.0 3.5 3 0 0 3 3 3 1 CS domain SMYLE_N PF18615.1 ORF45276 - 0.17 11.4 2.5 0.27 10.8 2.5 1.2 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain UDPGT PF00201.18 ORF40936 - 1.3e-22 80.3 0.1 1.8e-22 79.9 0.1 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF40936 - 2.1e-06 27.8 0.0 3.4e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Sec15 PF04091.12 ORF37488 - 3.8e-05 23.3 1.4 8.3e-05 22.1 1.4 1.6 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DUF445 PF04286.12 ORF37488 - 0.00028 20.8 0.6 0.00047 20.1 0.6 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF445) LRR_6 PF13516.6 ORF37488 - 0.0058 16.6 0.0 0.069 13.2 0.0 2.9 2 0 0 2 2 2 1 Leucine Rich repeat LRR_4 PF12799.7 ORF37488 - 3.2 8.3 7.8 39 4.9 0.4 4.3 3 0 0 3 3 3 0 Leucine Rich repeats (2 copies) Epsilon_antitox PF08998.11 ORF37488 - 5.1 7.4 7.9 24 5.3 0.2 4.0 2 2 1 4 4 4 0 Bacterial epsilon antitoxin BT1 PF03092.16 ORF29046 - 5.3e-18 64.5 17.7 2.4e-13 49.2 4.2 3.4 3 1 1 4 4 4 3 BT1 family cNMP_binding PF00027.29 ORF17815 - 7.4e-35 118.9 0.1 8.7e-19 67.4 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain B5 PF03484.15 ORF17815 - 0.18 12.1 0.8 0.7 10.2 0.7 2.1 1 1 0 1 1 1 0 tRNA synthetase B5 domain SBDS_C PF09377.10 ORF17815 - 0.42 10.6 3.5 1.4 8.9 3.5 1.9 1 0 0 1 1 1 0 SBDS protein C-terminal domain RGS_DHEX PF18148.1 ORF17815 - 2.9 8.1 6.1 9.2 6.5 4.5 2.5 1 1 1 2 2 2 0 Regulator of G-protein signalling DHEX domain Remorin_C PF03763.13 ORF17815 - 3.5 7.6 8.1 2.1 8.3 5.0 2.2 2 1 0 2 2 2 0 Remorin, C-terminal region KxDL PF10241.9 ORF17815 - 6.1 7.2 11.8 4.3 7.7 3.7 3.2 3 0 0 3 3 3 0 Uncharacterized conserved protein p450 PF00067.22 ORF105865 - 7.9e-53 179.8 0.3 1.1e-52 179.4 0.3 1.1 1 0 0 1 1 1 1 Cytochrome P450 CS PF04969.16 ORF102465 - 0.00061 20.7 0.1 0.68 11.0 0.0 3.5 3 0 0 3 3 3 1 CS domain Aminotran_1_2 PF00155.21 NODE_9983_length_1374_cov_1181.416729_g7348_i0reverse_frame_2 - 3.5e-48 164.6 0.0 4.1e-48 164.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 NODE_9983_length_1374_cov_1181.416729_g7348_i0reverse_frame_2 - 2.2e-05 23.2 0.0 7.3e-05 21.5 0.0 1.6 1 1 1 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme C1_1 PF00130.22 NODE_10024_length_1372_cov_288.377711_g6415_i1forward_frame_2 - 0.02 14.8 5.7 0.057 13.3 5.7 1.8 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) C1_2 PF03107.16 NODE_10024_length_1372_cov_288.377711_g6415_i1forward_frame_2 - 1.8 8.9 8.2 0.39 11.1 4.3 1.9 2 0 0 2 2 2 0 C1 domain FAM183 PF14886.6 NODE_10012_length_1373_cov_118.925262_g7373_i0reverse_frame_2 - 0.0051 17.5 0.1 0.014 16.1 0.1 1.6 1 0 0 1 1 1 1 FAM183A and FAM183B related His_Phos_2 PF00328.22 ORF98070 - 1.2e-11 44.6 1.2 2.7e-10 40.1 0.2 2.7 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 2) HNOB PF07700.15 ORF98070 - 0.031 14.2 0.7 0.066 13.2 0.7 1.5 1 0 0 1 1 1 0 Haem-NO-binding Asp PF00026.23 ORF94395 - 4e-08 33.0 0.0 0.0058 16.1 0.0 2.1 2 0 0 2 2 2 2 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF94395 - 0.12 12.1 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal Ion_trans PF00520.31 ORF89860 - 6.3e-20 71.4 13.3 8.7e-20 71.0 13.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF89860 - 8.3e-06 25.3 0.1 0.0003 20.5 0.0 2.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF89860 - 9.1e-06 24.9 0.9 0.00065 19.1 0.2 2.8 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF89860 - 0.0013 18.6 0.4 0.0035 17.2 0.4 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF89860 - 0.0024 17.3 0.2 0.0086 15.5 0.2 2.0 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF89860 - 0.0028 18.0 1.6 0.0057 17.1 0.3 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_10 PF14788.6 ORF89860 - 0.096 12.6 0.2 0.24 11.3 0.0 1.8 2 0 0 2 2 2 0 EF hand WD40 PF00400.32 ORF72115 - 6.8e-07 29.9 21.3 0.001 19.8 0.0 6.2 6 0 0 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF72115 - 0.00023 21.4 0.2 10 6.5 0.0 4.2 2 2 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain SAM_2 PF07647.17 ORF72115 - 0.0017 18.4 0.0 0.0045 17.1 0.0 1.7 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Phospholip_B PF04916.13 ORF64521 - 2.1e-130 435.8 0.3 2.4e-130 435.6 0.3 1.0 1 0 0 1 1 1 1 Phospholipase B WD40 PF00400.32 ORF57405 - 6.8e-07 29.9 21.3 0.001 19.8 0.0 6.2 6 0 0 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF57405 - 0.00023 21.4 0.2 10 6.5 0.0 4.2 2 2 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain SAM_2 PF07647.17 ORF57405 - 0.0017 18.4 0.0 0.0045 17.1 0.0 1.7 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Peptidase_S10 PF00450.22 ORF52021 - 6.9e-100 335.4 0.0 8.1e-100 335.2 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase p450 PF00067.22 ORF5075 - 4.8e-58 197.0 0.0 6e-58 196.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Ax_dynein_light PF10211.9 ORF4637 - 1.1e-08 35.3 7.1 1.1e-08 35.3 7.1 2.4 2 0 0 2 2 2 1 Axonemal dynein light chain Phage_GP20 PF06810.11 ORF4637 - 0.00061 19.6 20.7 0.0026 17.6 6.7 3.0 3 0 0 3 3 3 2 Phage minor structural protein GP20 Prominin PF05478.11 ORF4637 - 0.0016 16.5 4.1 0.0016 16.5 4.1 2.1 2 0 0 2 2 2 1 Prominin Fib_alpha PF08702.10 ORF4637 - 0.0035 17.5 21.2 0.037 14.2 6.5 3.3 2 1 1 3 3 3 2 Fibrinogen alpha/beta chain family GCP_C_terminal PF04130.13 ORF4637 - 0.014 14.9 3.4 0.024 14.1 3.4 1.4 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal Spc7 PF08317.11 ORF4637 - 0.015 14.2 20.8 0.088 11.7 9.5 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF4637 - 0.072 13.1 16.6 0.3 11.1 3.2 3.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) ARL2_Bind_BART PF11527.8 ORF4637 - 0.074 13.2 3.1 0.18 11.9 0.9 2.5 1 1 1 2 2 2 0 The ARF-like 2 binding protein BART DUF948 PF06103.11 ORF4637 - 0.079 13.2 7.0 5.6 7.3 0.1 3.7 4 0 0 4 4 3 0 Bacterial protein of unknown function (DUF948) Tub PF01167.18 ORF4637 - 0.12 12.1 1.5 0.21 11.3 1.5 1.3 1 0 0 1 1 1 0 Tub family DUF5056 PF16479.5 ORF4637 - 0.15 12.3 0.0 0.41 10.9 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5056) ArsR PF09824.9 ORF4637 - 0.22 11.1 3.4 0.32 10.6 0.2 2.7 2 1 0 2 2 2 0 ArsR transcriptional regulator CENP-H PF05837.12 ORF4637 - 0.45 10.9 21.4 1.3 9.4 11.1 3.5 3 0 0 3 3 3 0 Centromere protein H (CENP-H) Snapin_Pallidin PF14712.6 ORF4637 - 0.84 10.1 23.7 8.2 6.9 5.0 3.7 2 1 1 3 3 3 0 Snapin/Pallidin TMPIT PF07851.13 ORF4637 - 2 7.6 15.2 4.9 6.3 0.7 2.7 2 1 1 3 3 3 0 TMPIT-like protein Muted PF14942.6 ORF4637 - 2.4 8.5 22.1 0.11 12.8 8.8 2.9 3 0 0 3 3 3 0 Organelle biogenesis, Muted-like protein DUF4094 PF13334.6 ORF4637 - 4.4 7.8 6.5 7.5 7.1 0.5 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) Baculo_PEP_C PF04513.12 ORF4637 - 4.8 7.2 7.0 17 5.5 0.5 3.2 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus EMC3_TMCO1 PF01956.16 ORF4637 - 8.9 6.0 11.1 0.82 9.4 3.8 2.2 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Macro PF01661.21 ORF28974 - 3.2e-30 104.6 0.1 3.2e-30 104.6 0.1 2.4 3 0 0 3 3 3 1 Macro domain OmpH PF03938.14 ORF28974 - 0.007 16.7 10.5 0.007 16.7 10.5 4.1 2 1 2 4 4 4 1 Outer membrane protein (OmpH-like) DUF4175 PF13779.6 ORF28974 - 1.8 6.4 7.7 2.7 5.8 7.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) SpecificRecomb PF10136.9 ORF28974 - 6.9 4.9 7.2 7.3 4.8 5.2 1.9 2 0 0 2 2 2 0 Site-specific recombinase Radical_SAM PF04055.21 ORF22556 - 3.5e-18 66.5 0.0 5.5e-18 65.9 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily HemN_C PF06969.16 ORF22556 - 1.8e-08 34.3 0.0 9.6e-08 32.0 0.0 2.4 2 0 0 2 2 2 1 HemN C-terminal domain Mur_ligase PF01225.25 ORF21433 - 1.5e-20 73.3 0.0 5.2e-20 71.6 0.0 1.9 2 0 0 2 2 2 1 Mur ligase family, catalytic domain Mur_ligase_M PF08245.12 ORF21433 - 2.1e-18 67.0 0.0 2.8e-18 66.6 0.0 1.2 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 ORF21433 - 2e-10 40.8 0.0 8.1e-10 38.8 0.0 2.0 3 0 0 3 3 3 1 Mur ligase family, glutamate ligase domain p450 PF00067.22 ORF20622 - 4.8e-58 197.0 0.0 6e-58 196.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 EcKinase PF02958.20 ORF105965 - 6.4e-15 55.2 0.0 1.3e-14 54.2 0.0 1.4 1 1 0 1 1 1 1 Ecdysteroid kinase APH PF01636.23 ORF105965 - 1.1e-12 48.4 5.5 2.2e-12 47.4 5.5 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF105965 - 0.033 13.8 0.0 0.055 13.1 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase DUF1679 PF07914.11 ORF105965 - 0.059 12.2 0.1 0.1 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) DUF4148 PF13663.6 ORF105965 - 0.71 10.1 5.5 0.95 9.7 0.0 3.2 4 0 0 4 4 4 0 Domain of unknown function (DUF4148) GDI PF00996.18 ORF83671 - 9.5e-200 663.7 0.0 1.1e-199 663.4 0.0 1.0 1 0 0 1 1 1 1 GDP dissociation inhibitor TPR_11 PF13414.6 ORF78300 - 4.5e-20 71.1 0.1 0.00027 20.6 0.0 5.5 5 0 0 5 5 5 5 TPR repeat TPR_17 PF13431.6 ORF78300 - 3.3e-13 49.0 8.6 0.025 14.9 0.1 5.1 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF78300 - 0.0087 16.1 5.4 37 4.8 0.0 5.7 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF78300 - 0.067 13.0 21.6 5.1 7.1 0.1 8.0 11 0 0 11 11 11 0 Tetratricopeptide repeat GDI PF00996.18 ORF76594 - 9.5e-200 663.7 0.0 1.1e-199 663.4 0.0 1.0 1 0 0 1 1 1 1 GDP dissociation inhibitor GDI PF00996.18 ORF71004 - 1.1e-199 663.4 0.0 1.3e-199 663.2 0.0 1.0 1 0 0 1 1 1 1 GDP dissociation inhibitor CCG PF02754.16 ORF66325 - 1.7e-30 105.0 7.8 3.8e-13 49.4 0.2 3.6 3 0 0 3 3 3 3 Cysteine-rich domain Fer4_8 PF13183.6 ORF66325 - 3.1e-12 46.8 4.1 3.1e-12 46.8 4.1 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF66325 - 3.6e-12 46.7 5.3 1e-11 45.3 5.3 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF66325 - 4.6e-11 43.1 4.3 1.7e-10 41.3 4.3 2.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF66325 - 7.9e-07 29.9 4.0 2.1e-06 28.5 4.0 1.8 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 ORF66325 - 4.1e-06 26.6 11.0 0.0086 16.1 1.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 ORF66325 - 5.3e-06 26.5 9.6 0.00043 20.3 11.6 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF66325 - 5.9e-06 26.4 10.4 0.023 14.9 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 ORF66325 - 1e-05 25.1 7.9 0.032 14.1 1.6 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 ORF66325 - 3.6e-05 23.9 16.0 0.0019 18.5 1.2 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 ORF66325 - 4e-05 23.8 1.2 0.14 12.3 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF66325 - 0.0002 21.3 15.4 0.038 14.1 3.9 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 ORF66325 - 0.00043 20.3 6.4 0.13 12.4 1.3 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain DUF3390 PF11870.8 ORF66325 - 0.043 14.2 0.0 0.096 13.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) Fer4_22 PF17179.4 ORF66325 - 0.49 11.3 13.1 3.6 8.5 0.6 2.9 2 1 0 2 2 2 0 4Fe-4S dicluster domain Mut7-C PF01927.16 ORF66325 - 3.7 7.7 6.7 4 7.5 4.3 2.3 2 1 0 2 2 2 0 Mut7-C RNAse domain Fer4_13 PF13370.6 ORF66325 - 7.9 7.1 10.4 15 6.3 1.0 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Peptidase_S10 PF00450.22 ORF6533 - 1.6e-105 353.9 3.2 2e-105 353.6 3.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S10 PF00450.22 ORF61620 - 1.6e-105 353.9 3.2 2e-105 353.6 3.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase eIF-5_eIF-2B PF01873.17 ORF54977 - 9.4e-34 115.8 0.1 3.2e-33 114.1 0.1 2.0 1 0 0 1 1 1 1 Domain found in IF2B/IF5 W2 PF02020.18 ORF54977 - 4.7e-12 45.9 0.8 4.7e-12 45.9 0.8 3.8 2 1 1 3 3 3 1 eIF4-gamma/eIF5/eIF2-epsilon Dapper PF15268.6 ORF54977 - 0.059 12.2 22.1 0.074 11.9 22.1 1.1 1 0 0 1 1 1 0 Dapper Mitofilin PF09731.9 ORF54977 - 2.3 7.0 39.1 3.1 6.5 39.1 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Ndc1_Nup PF09531.10 ORF54977 - 2.4 6.8 10.4 3.4 6.2 10.4 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup TIR_2 PF13676.6 ORF51373 - 0.011 16.4 0.0 0.025 15.2 0.0 1.6 1 0 0 1 1 1 0 TIR domain DUF5389 PF17364.2 ORF51373 - 0.045 13.8 4.2 0.97 9.5 1.7 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5389) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks19.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks19.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks19.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks19.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RVT_2 PF07727.14 ORF4302 - 5.4e-16 59.0 0.0 2.7e-15 56.7 0.0 1.9 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_2 PF07727.14 ORF11320 - 5.1e-16 59.1 0.0 2.6e-15 56.7 0.0 2.0 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) TIG PF01833.24 NODE_57_length_6743_cov_18.117472_g20_i0reverse_frame_1 - 9e-39 131.4 93.9 2e-11 43.8 3.2 10.5 11 0 0 11 11 11 7 IPT/TIG domain G8 PF10162.9 NODE_57_length_6743_cov_18.117472_g20_i0reverse_frame_1 - 7.3e-29 100.3 0.5 4.4e-27 94.6 0.0 3.9 3 0 0 3 3 3 1 G8 domain F5_F8_type_C PF00754.25 NODE_57_length_6743_cov_18.117472_g20_i0reverse_frame_1 - 0.017 15.2 2.2 0.41 10.8 0.4 3.7 2 0 0 2 2 2 0 F5/8 type C domain GLEYA PF10528.9 NODE_57_length_6743_cov_18.117472_g20_i0reverse_frame_1 - 6.7 7.2 10.6 0.23 11.9 1.0 3.8 4 0 0 4 4 4 0 GLEYA domain RVT_2 PF07727.14 ORF49850 - 1.3e-33 116.7 0.0 2.6e-33 115.7 0.0 1.4 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) zf-CCHC PF00098.23 ORF49850 - 2.1e-05 24.4 1.7 6.5e-05 22.8 1.7 1.9 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 ORF49850 - 0.029 14.2 1.6 0.064 13.1 1.6 1.6 1 0 0 1 1 1 0 Zinc knuckle AAA_8 PF12780.7 ORF44045 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF44045 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF44045 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF44045 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF44045 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF44045 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF44045 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF44045 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF44045 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF44045 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF40667 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF40667 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF40667 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF40667 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF40667 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF40667 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF40667 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF40667 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF40667 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF40667 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF40630 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF40630 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF40630 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF40630 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF40630 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF40630 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF40630 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF40630 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF40630 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF40630 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF34435 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF34435 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF34435 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF34435 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF34435 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF34435 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF34435 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF34435 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF34435 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF34435 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF3099 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF3099 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF3099 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF3099 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF3099 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF3099 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF3099 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF3099 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF3099 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF3099 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF21830 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF21830 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF21830 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF21830 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF21830 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF21830 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF21830 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF21830 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF21830 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF21830 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF19948 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF19948 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF19948 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF19948 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF19948 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF19948 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF19948 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF19948 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF19948 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF19948 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF16376 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF16376 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF16376 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF16376 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF16376 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF16376 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF16376 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF16376 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF16376 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF16376 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF13868 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF13868 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF13868 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF13868 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF13868 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF13868 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF13868 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF13868 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF13868 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF13868 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF102730 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF102730 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF102730 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF102730 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF102730 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF102730 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF102730 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF102730 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF102730 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF102730 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF88844 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF88844 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF88844 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF88844 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF88844 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF88844 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF88844 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF88844 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF84893 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF84893 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF84893 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF84893 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF84893 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF84893 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF84893 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF84893 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF8283 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF8283 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF8283 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF8283 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF8283 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF8283 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF8283 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF8283 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF82181 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF82181 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF82181 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF82181 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF82181 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF82181 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF82181 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF82181 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF80085 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF80085 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF80085 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF80085 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF80085 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF80085 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF80085 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF80085 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF79826 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF79826 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF79826 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF79826 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF79826 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF79826 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF79826 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF79826 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF66443 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF66443 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF66443 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF66443 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF66443 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF66443 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF66443 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF66443 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF65349 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF65349 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF65349 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF65349 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF65349 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF65349 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF65349 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF65349 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF56978 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF56978 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF56978 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF56978 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF56978 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF56978 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF56978 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF56978 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF51329 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF51329 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF51329 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF51329 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF51329 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF51329 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF51329 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF51329 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF48810 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF48810 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF48810 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF48810 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF48810 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF48810 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF48810 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF48810 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF26937 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF26937 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF26937 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF26937 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF26937 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF26937 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF26937 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF26937 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF107732 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF107732 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF107732 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF107732 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF107732 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF107732 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF107732 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF107732 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF102096 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF102096 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF102096 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF102096 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF102096 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF102096 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF102096 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF102096 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF101528 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF101528 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF101528 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF101528 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF101528 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF101528 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF101528 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF101528 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) PTS_2-RNA PF01885.16 ORF7061 - 9.2e-07 29.1 0.0 1.8e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PTS_2-RNA PF01885.16 ORF4296 - 7.9e-10 39.1 0.0 1.4e-09 38.2 0.0 1.4 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PTS_2-RNA PF01885.16 ORF11326 - 7.9e-10 39.1 0.0 1.4e-09 38.2 0.0 1.4 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PTS_2-RNA PF01885.16 ORF81838 - 8.9e-07 29.1 0.0 1.7e-06 28.2 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PTS_2-RNA PF01885.16 ORF65013 - 8.8e-07 29.1 0.0 1.7e-06 28.2 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family GBP PF02263.19 ORF72640 - 1.5e-65 221.1 0.1 1.5e-65 221.1 0.1 5.5 6 1 0 7 7 7 1 Guanylate-binding protein, N-terminal domain GBP_C PF02841.14 ORF72640 - 2.9e-27 95.9 33.9 2.9e-27 95.9 33.9 11.2 1 1 8 11 11 11 1 Guanylate-binding protein, C-terminal domain Fez1 PF06818.15 ORF72640 - 0.0044 17.5 25.4 0.0044 17.5 25.4 10.5 1 1 10 11 11 11 1 Fez1 ATG16 PF08614.11 ORF72640 - 0.0061 16.8 19.1 0.0061 16.8 19.1 11.3 1 1 7 10 10 10 1 Autophagy protein 16 (ATG16) RVT_1 PF00078.27 ORF15760 - 1.9e-26 93.0 0.0 1.9e-25 89.7 0.0 2.2 1 1 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Exo_endo_phos PF03372.23 ORF15760 - 8.5e-06 25.4 0.0 3.6e-05 23.4 0.0 2.0 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF15760 - 0.0028 17.5 0.0 0.0084 16.0 0.0 1.9 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase UCH PF00443.29 ORF15760 - 0.018 14.6 0.6 0.9 9.0 0.0 2.7 1 1 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase zf-C2H2_9 PF16293.5 ORF15760 - 0.11 12.4 0.1 0.11 12.4 0.1 2.5 3 0 0 3 3 3 0 C2H2 type zinc-finger (1 copy) Cys_rich_CPCC PF14206.6 ORF15760 - 0.13 12.1 0.3 1.6 8.6 0.1 2.5 2 0 0 2 2 2 0 Cysteine-rich CPCC zf-C2H2_2 PF12756.7 ORF15760 - 0.21 12.0 9.1 7.5 7.0 1.4 3.5 2 2 2 4 4 4 0 C2H2 type zinc-finger (2 copies) GBP PF02263.19 ORF53580 - 1e-56 192.1 0.4 1e-56 192.1 0.4 5.6 6 1 0 7 7 7 1 Guanylate-binding protein, N-terminal domain GBP_C PF02841.14 ORF53580 - 1.7e-27 96.7 33.1 1.7e-27 96.7 33.1 11.2 1 1 10 11 11 11 1 Guanylate-binding protein, C-terminal domain Fez1 PF06818.15 ORF53580 - 0.0037 17.7 25.2 0.0037 17.7 25.2 10.5 1 1 9 10 10 10 1 Fez1 G8 PF10162.9 ORF46670 - 2.7e-20 72.7 0.0 1.2e-19 70.6 0.0 2.2 1 0 0 1 1 1 1 G8 domain Beta_helix PF13229.6 ORF46670 - 1e-06 28.7 13.2 1e-06 28.7 13.2 5.5 4 1 1 5 5 5 2 Right handed beta helix region NosD PF05048.13 ORF46670 - 5.8e-05 22.5 8.5 5.8e-05 22.5 8.5 4.5 4 1 0 4 4 4 1 Periplasmic copper-binding protein (NosD) PTS_2-RNA PF01885.16 ORF43246 - 0.00047 20.3 0.0 0.00086 19.4 0.0 1.4 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family HECT PF00632.25 ORF52615 - 1.1e-57 195.9 0.2 4.4e-57 193.9 0.0 2.0 2 0 0 2 2 2 1 HECT-domain (ubiquitin-transferase) RCC1 PF00415.18 ORF52615 - 1.8e-13 50.9 8.4 6.4e-10 39.5 0.0 4.7 4 1 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF52615 - 6.1e-06 25.9 0.1 6.1e-06 25.9 0.1 4.8 5 0 0 5 5 5 1 Regulator of chromosome condensation (RCC1) repeat HECT PF00632.25 ORF25277 - 1.1e-57 195.9 0.2 4.4e-57 193.9 0.0 2.0 2 0 0 2 2 2 1 HECT-domain (ubiquitin-transferase) RCC1 PF00415.18 ORF25277 - 1.8e-13 50.9 8.4 6.4e-10 39.5 0.0 4.7 4 1 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF25277 - 6.1e-06 25.9 0.1 6.1e-06 25.9 0.1 4.8 5 0 0 5 5 5 1 Regulator of chromosome condensation (RCC1) repeat RNA_pol_Rpb2_6 PF00562.28 ORF112064 - 1.4e-161 537.9 0.1 2.5e-160 533.8 0.3 2.3 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 ORF112064 - 1e-58 198.2 0.0 2.5e-58 196.9 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 ORF112064 - 4.2e-31 106.9 0.0 9.1e-31 105.9 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_45 PF10385.9 ORF112064 - 6.7e-29 100.0 1.1 6.8e-28 96.7 0.3 3.0 3 0 0 3 3 3 1 RNA polymerase beta subunit external 1 domain RNA_pol_Rpb2_7 PF04560.20 ORF112064 - 7.7e-28 96.7 0.1 2.1e-27 95.4 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_2 PF04561.14 ORF112064 - 2.2e-25 89.4 0.9 5.8e-15 55.4 0.1 3.2 3 0 0 3 3 3 2 RNA polymerase Rpb2, domain 2 SPG4 PF17325.2 ORF112064 - 0.043 14.9 0.1 0.17 13.0 0.0 2.0 2 0 0 2 2 2 0 Stationary phase protein 4 Spc7 PF08317.11 ORF112064 - 0.87 8.4 5.7 2.1 7.2 5.7 1.5 1 0 0 1 1 1 0 Spc7 kinetochore protein UQ_con PF00179.26 ORF78830 - 3.6e-14 52.6 0.0 8e-14 51.5 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme LRR_6 PF13516.6 ORF78830 - 2.4e-08 33.4 7.7 4.3 7.6 0.1 7.6 8 0 0 8 8 8 3 Leucine Rich repeat LRR_1 PF00560.33 ORF78830 - 8.6e-05 22.6 14.1 6.4 7.7 0.1 8.6 9 0 0 9 9 9 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF78830 - 0.00011 22.5 17.8 0.64 10.5 0.0 7.5 5 1 2 7 7 7 3 Leucine Rich repeats (2 copies) RRM_1 PF00076.22 ORF78830 - 0.056 13.3 0.3 0.32 10.8 0.3 2.3 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LRR_8 PF13855.6 ORF78830 - 0.27 11.1 17.3 0.64 9.8 0.0 6.0 5 2 1 6 6 6 0 Leucine rich repeat RNA_pol_Rpb1_5 PF04998.17 ORF4416 - 3.2e-78 262.9 0.0 5.1e-78 262.2 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.12 ORF4416 - 1.6e-65 221.5 0.0 2.9e-65 220.7 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 ORF4416 - 1.1e-37 129.8 0.1 3.8e-27 95.5 0.0 2.9 2 1 1 3 3 3 2 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 ORF4416 - 1.9e-27 96.1 0.0 4.6e-27 94.9 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 ORF4416 - 1.3e-18 66.9 0.3 1.3e-18 66.9 0.3 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 Peptidase_M23 PF01551.22 ORF4416 - 0.0065 16.7 0.0 1.5 9.0 0.0 3.8 4 0 0 4 4 4 1 Peptidase family M23 GATase_5 PF13507.6 ORF53640 - 4e-105 350.6 0.0 6.4e-105 349.9 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain FGAR-AT_N PF18076.1 ORF53640 - 2.4e-45 153.2 0.0 5.1e-45 152.2 0.0 1.6 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase N-terminal AIRS_C PF02769.22 ORF53640 - 3.4e-42 144.2 2.0 9.1e-26 90.8 0.0 2.4 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain FGAR-AT_linker PF18072.1 ORF53640 - 1.2e-23 83.4 0.0 4.3e-23 81.6 0.0 2.1 2 0 0 2 2 2 1 Formylglycinamide ribonucleotide amidotransferase linker domain AIRS PF00586.24 ORF53640 - 0.027 15.1 0.6 0.75 10.5 0.0 3.3 3 0 0 3 3 3 0 AIR synthase related protein, N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks1.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks1.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks1.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks1.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L18p PF00861.22 ORF94625 - 1.3e-43 148.0 4.5 1.5e-43 147.9 4.5 1.0 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L5e PF17144.4 ORF94625 - 0.0047 16.9 0.1 0.0053 16.8 0.1 1.1 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 TM1506 PF08973.10 ORF94625 - 0.091 12.4 0.2 0.16 11.6 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1893) Peptidase_C1 PF00112.23 ORF94591 - 6.8e-12 45.9 0.3 8.8e-12 45.6 0.3 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Atg8 PF02991.16 ORF92873 - 2.8e-37 127.0 0.4 3.2e-37 126.9 0.4 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF92873 - 5.8e-05 23.4 0.1 7.2e-05 23.1 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 DUF3848 PF12959.7 ORF92873 - 0.041 13.9 0.9 5.3 7.2 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3848) ARS2 PF04959.13 ORF92873 - 0.064 13.6 0.4 0.083 13.3 0.4 1.1 1 0 0 1 1 1 0 Arsenite-resistance protein 2 Citrus_P18 PF05520.11 ORF92601 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Citrus tristeza virus P18 protein EF-hand_7 PF13499.6 ORF92366 - 4e-11 43.2 0.6 0.00023 21.6 0.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF92366 - 1.3e-10 40.1 2.0 0.00023 20.5 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF92366 - 1e-08 34.3 2.6 0.00038 19.8 0.5 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF92366 - 1.9e-08 33.6 0.8 0.0024 17.7 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF92366 - 6.4e-07 29.1 0.2 0.0023 17.7 0.1 2.4 2 0 0 2 2 2 2 EF-hand domain pair DUF1654 PF07867.11 ORF92366 - 0.042 13.6 0.1 0.077 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1654) SPARC_Ca_bdg PF10591.9 ORF92366 - 0.044 14.1 0.1 1.7 9.0 0.0 2.1 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Pfk_N PF18468.1 ORF92211 - 0.013 15.9 0.0 0.024 15.1 0.0 1.4 1 0 0 1 1 1 0 Phosphofructokinase N-terminal domain yeast Tfb2_C PF18307.1 ORF92211 - 0.022 15.2 0.6 0.12 12.8 0.2 2.0 2 0 0 2 2 2 0 Transcription factor Tfb2 (p52) C-terminal domain TOPRIM_C PF16898.5 ORF92211 - 0.076 13.3 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 C-terminal associated domain of TOPRIM DUF2533 PF10752.9 ORF91839 - 0.12 12.8 0.1 0.18 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) Ank_4 PF13637.6 ORF91634 - 0.0013 19.3 0.0 0.0022 18.5 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF91634 - 0.004 17.4 0.0 0.0063 16.8 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF91634 - 0.033 14.7 0.0 0.072 13.7 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeat Ank_2 PF12796.7 ORF91634 - 0.079 13.6 0.0 0.11 13.1 0.0 1.3 1 1 0 1 1 1 0 Ankyrin repeats (3 copies) Pkinase PF00069.25 ORF9157 - 9.3e-10 38.3 0.1 1e-09 38.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain VHL_C PF17211.3 ORF9157 - 0.055 13.5 0.7 0.083 12.9 0.7 1.4 1 1 0 1 1 1 0 VHL box domain CUE PF02845.16 ORF90837 - 3.5e-13 49.0 0.2 5.5e-13 48.3 0.2 1.3 1 0 0 1 1 1 1 CUE domain PIN_5 PF08745.11 ORF90651 - 0.058 12.8 0.2 0.08 12.4 0.2 1.5 1 1 0 1 1 1 0 PINc domain ribonuclease AP2 PF00847.20 ORF90314 - 0.00016 21.8 0.3 0.00027 21.1 0.3 1.4 1 0 0 1 1 1 1 AP2 domain tRNA_NucTran2_2 PF13735.6 ORF90314 - 0.07 13.1 0.1 0.079 13.0 0.1 1.1 1 0 0 1 1 1 0 tRNA nucleotidyltransferase domain 2 putative SPOR PF05036.13 ORF90314 - 0.1 13.0 0.1 1.2 9.6 0.1 2.1 1 1 0 1 1 1 0 Sporulation related domain Fer4_17 PF13534.6 ORF89965 - 6.3e-10 39.4 8.2 9.8e-10 38.8 8.2 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF89965 - 8.4e-09 35.8 7.0 1.5e-08 35.0 7.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF89965 - 2.1e-06 27.8 7.3 3.9e-06 26.9 7.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF89965 - 0.017 15.2 11.7 0.041 14.1 11.7 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF89965 - 0.033 14.7 8.9 0.14 12.7 2.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain SAA PF00277.18 ORF89965 - 0.069 13.6 0.0 0.088 13.3 0.0 1.1 1 0 0 1 1 1 0 Serum amyloid A protein Fer4_7 PF12838.7 ORF89965 - 0.1 13.2 13.6 0.35 11.5 13.7 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Acyl-CoA_dh_M PF02770.19 ORF88483 - 0.059 13.6 0.0 0.078 13.2 0.0 1.3 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain TTL PF03133.15 ORF8837 - 7.7e-20 71.2 0.4 8.6e-20 71.0 0.4 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family RsmJ PF04378.13 ORF8837 - 0.029 13.6 0.0 0.034 13.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA large subunit methyltransferase D, RlmJ DUF448 PF04296.13 ORF8837 - 0.032 14.1 0.0 0.069 13.0 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF448) ATPgrasp_ST PF14397.6 ORF8837 - 0.097 11.9 0.0 0.13 11.5 0.0 1.3 1 1 0 1 1 1 0 Sugar-transfer associated ATP-grasp Abhydrolase_3 PF07859.13 ORF87116 - 1.8e-10 41.1 0.0 2.4e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF87116 - 0.048 12.5 0.1 0.048 12.5 0.1 1.1 1 0 0 1 1 1 0 Steryl acetyl hydrolase COesterase PF00135.28 ORF87116 - 0.056 12.3 0.0 0.056 12.3 0.0 1.2 1 0 0 1 1 1 0 Carboxylesterase family GSHPx PF00255.19 ORF86997 - 8.2e-18 64.0 0.0 1.1e-17 63.6 0.0 1.2 1 0 0 1 1 1 1 Glutathione peroxidase DUF2533 PF10752.9 ORF86355 - 0.12 12.8 0.1 0.18 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) BNR_4 PF15892.5 ORF85216 - 0.018 14.4 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 BNR repeat-containing family member Integrase_Zn PF02022.19 ORF85139 - 0.02 14.8 0.1 0.02 14.8 0.1 1.7 2 0 0 2 2 2 0 Integrase Zinc binding domain Ras PF00071.22 ORF84743 - 8.1e-16 58.0 0.0 8.8e-16 57.9 0.0 1.0 1 0 0 1 1 1 1 Ras family ELMO_CED12 PF04727.13 ORF84743 - 0.098 12.8 0.1 0.11 12.5 0.1 1.0 1 0 0 1 1 1 0 ELMO/CED-12 family Atg8 PF02991.16 ORF84503 - 4.8e-37 126.3 0.1 5.6e-37 126.1 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF84503 - 8.7e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 DUF4788 PF16032.5 ORF83783 - 0.2 10.6 0.0 0.25 10.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4788) SpvD PF05563.12 ORF83448 - 0.16 11.6 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Salmonella plasmid virulence protein SpvD CBM_1 PF00734.18 ORF83429 - 0.021 14.8 2.0 0.05 13.6 2.0 1.6 1 0 0 1 1 1 0 Fungal cellulose binding domain DUF3631 PF12307.8 ORF83360 - 0.0066 16.7 0.8 0.0079 16.4 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3631) Rhodanese PF00581.20 ORF82816 - 0.0012 19.4 0.0 0.0017 18.9 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain DUF2620 PF10941.8 ORF80203 - 1.5e-48 163.7 2.8 1.7e-48 163.6 2.8 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF2620 LacAB_rpiB PF02502.18 ORF80203 - 0.013 15.5 1.0 0.026 14.5 0.4 1.7 1 1 1 2 2 2 0 Ribose/Galactose Isomerase Atg8 PF02991.16 ORF79458 - 1.7e-29 102.1 0.1 1.9e-29 101.9 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF79458 - 1.2e-06 28.8 0.1 1.5e-06 28.5 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Pho88 PF10032.9 ORF78388 - 0.025 13.8 0.1 0.032 13.5 0.1 1.3 1 0 0 1 1 1 0 Phosphate transport (Pho88) Ribosomal_L18 PF17135.4 ORF77373 - 5.5e-58 195.4 0.6 6e-58 195.3 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 ORF77373 - 0.044 14.5 0.0 0.044 14.5 0.0 1.8 2 0 0 2 2 2 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AAA_19 PF13245.6 ORF77373 - 0.11 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain Copine PF07002.16 ORF76291 - 1.6e-33 116.0 0.6 1.9e-33 115.8 0.6 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF76291 - 9.8e-05 22.5 0.1 0.00012 22.2 0.1 1.3 1 1 0 1 1 1 1 vWA found in TerF C terminus Peptidase_C1 PF00112.23 ORF75935 - 6.8e-12 45.9 0.3 8.8e-12 45.6 0.3 1.2 1 0 0 1 1 1 1 Papain family cysteine protease GP41 PF00517.17 ORF75731 - 0.27 11.1 1.0 0.33 10.8 1.0 1.1 1 0 0 1 1 1 0 Retroviral envelope protein KCNQ2_u3 PF16642.5 ORF75731 - 9 7.4 12.3 4.8 8.2 7.1 2.0 1 1 1 2 2 2 0 Unstructured region on Potassium channel subunit alpha KvLQT2 Papo_T_antigen PF02380.15 ORF75114 - 0.041 14.0 0.1 0.07 13.3 0.1 1.4 1 0 0 1 1 1 0 T-antigen specific domain CRAL_TRIO PF00650.20 ORF74906 - 0.05 13.3 0.5 0.06 13.1 0.5 1.1 1 0 0 1 1 1 0 CRAL/TRIO domain DUF3844 PF12955.7 ORF73385 - 0.0056 16.8 0.4 0.0076 16.4 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3844) DUF1180 PF06679.12 ORF73385 - 0.041 14.3 2.8 0.048 14.1 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Pkinase PF00069.25 ORF73164 - 9.3e-10 38.3 0.1 1e-09 38.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain VHL_C PF17211.3 ORF73164 - 0.055 13.5 0.7 0.083 12.9 0.7 1.4 1 1 0 1 1 1 0 VHL box domain DUF4090 PF13319.6 ORF72947 - 0.029 14.6 0.0 0.048 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4090) MFA1_2 PF17317.2 ORF72346 - 1.7 8.5 5.2 4 7.3 5.2 1.6 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 Bys1 PF04681.12 ORF71892 - 0.078 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Blastomyces yeast-phase-specific protein NUDIX PF00293.28 ORF71451 - 2.6e-08 34.0 0.0 3e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.6 ORF71451 - 0.1 12.2 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Nucleotide hydrolase TAF PF02969.17 ORF71307 - 4.4e-08 33.2 0.3 6.9e-08 32.6 0.3 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CBFD_NFYB_HMF PF00808.23 ORF71307 - 0.0016 18.7 0.8 0.0036 17.6 0.8 1.6 1 1 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF71307 - 0.0031 17.9 0.2 0.0046 17.3 0.2 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 ORF71307 - 0.012 15.7 0.1 0.016 15.3 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Asp PF00026.23 ORF71235 - 2.1e-08 34.0 0.3 2.9e-08 33.5 0.3 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF71235 - 0.0018 18.5 0.2 0.0027 18.0 0.2 1.2 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal DNA_ligase_A_N PF04675.14 ORF70671 - 3.1e-20 73.2 0.5 3.4e-20 73.1 0.5 1.0 1 0 0 1 1 1 1 DNA ligase N terminus Carbam_trans_C PF16861.5 ORF70373 - 9e-30 103.5 0.0 9.9e-30 103.3 0.0 1.0 1 0 0 1 1 1 1 Carbamoyltransferase C-terminus Sua5_yciO_yrdC PF01300.18 ORF70373 - 0.0012 18.4 0.0 0.0013 18.2 0.0 1.1 1 0 0 1 1 1 1 Telomere recombination DNA_gyraseA_C PF03989.13 ORF70373 - 0.14 11.6 0.1 0.25 10.9 0.1 1.3 1 0 0 1 1 1 0 DNA gyrase C-terminal domain, beta-propeller DDE_Tnp_Tn3 PF01526.17 ORF70373 - 0.15 10.8 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Tn3 transposase DDE domain TMCO5 PF14992.6 ORF67668 - 0.044 13.4 9.6 0.054 13.1 9.6 1.1 1 0 0 1 1 1 0 TMCO5 family Jnk-SapK_ap_N PF09744.9 ORF67668 - 0.063 13.5 8.5 0.081 13.1 8.5 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 UPF0184 PF03670.13 ORF67668 - 0.16 12.3 5.1 0.077 13.4 2.9 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) Prominin PF05478.11 ORF67668 - 0.22 9.5 6.6 0.25 9.3 6.6 1.0 1 0 0 1 1 1 0 Prominin UPF0449 PF15136.6 ORF67668 - 0.76 10.3 9.9 1.4 9.4 9.9 1.5 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 LMBR1 PF04791.16 ORF67668 - 0.8 8.5 7.1 0.89 8.4 7.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ly49 PF08391.10 ORF67668 - 2 8.8 9.5 3 8.2 9.5 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region TMF_DNA_bd PF12329.8 ORF67668 - 2.1 8.4 9.5 2.7 8.1 8.7 1.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Copine PF07002.16 ORF67388 - 1.6e-33 116.0 0.6 1.9e-33 115.8 0.6 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF67388 - 9.8e-05 22.5 0.1 0.00012 22.2 0.1 1.3 1 1 0 1 1 1 1 vWA found in TerF C terminus GldM_N PF12081.8 ORF66249 - 0.011 15.8 0.6 0.014 15.5 0.6 1.2 1 0 0 1 1 1 0 GldM N-terminal domain POLO_box PF00659.18 ORF64124 - 3.4e-05 23.9 0.1 6.7e-05 23.0 0.1 1.5 1 1 0 1 1 1 1 POLO box duplicated region Plk4_PB2 PF18409.1 ORF64124 - 0.13 13.0 0.0 0.16 12.7 0.0 1.1 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 adh_short PF00106.25 ORF64117 - 1.9e-09 37.3 0.1 4.2e-09 36.1 0.0 1.6 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF64117 - 8.2e-06 25.5 0.1 1.1e-05 25.2 0.1 1.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase FAM60A PF15396.6 ORF63658 - 5.9 6.8 9.2 6.8 6.6 9.2 1.1 1 0 0 1 1 1 0 Protein Family FAM60A GH101_N PF17995.1 ORF63576 - 0.1 12.2 0.1 0.18 11.4 0.1 1.4 1 1 0 1 1 1 0 Endo-alpha-N-acetylgalactosaminidase N-terminal v110 PF01639.17 ORF63267 - 0.043 13.7 0.3 0.061 13.2 0.3 1.3 1 0 0 1 1 1 0 Viral family 110 US22 PF02393.16 ORF62733 - 0.088 13.1 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 US22 like YgbA_NO PF11756.8 ORF62685 - 3.1e-39 133.6 3.0 3.7e-39 133.4 3.0 1.0 1 0 0 1 1 1 1 Nitrous oxide-stimulated promoter AFOR_C PF01314.18 ORF62685 - 0.097 11.7 0.3 0.097 11.7 0.3 1.1 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Blt1_C PF17183.4 ORF62533 - 0.01 15.4 0.0 0.016 14.8 0.0 1.3 1 0 0 1 1 1 0 Get5 carboxyl domain EF1G PF00647.19 ORF6150 - 0.052 13.6 0.0 0.058 13.4 0.0 1.2 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain CCDC53 PF10152.9 ORF61457 - 0.049 14.0 2.5 0.061 13.7 2.5 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex LapA_dom PF06305.11 ORF60883 - 0.077 12.8 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain CDC50 PF03381.15 ORF59863 - 3.8e-34 118.5 0.3 4.7e-34 118.2 0.3 1.1 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family LRR_4 PF12799.7 ORF59550 - 8.1e-13 48.3 10.1 6.8e-06 26.3 1.6 3.1 1 1 1 3 3 3 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF59550 - 5.5e-12 45.3 4.7 0.00011 21.9 0.0 2.9 2 1 0 2 2 2 2 Leucine rich repeat LRR_9 PF14580.6 ORF59550 - 3e-08 33.4 1.8 3.5e-08 33.2 1.8 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_6 PF13516.6 ORF59550 - 4.7e-07 29.4 4.2 0.024 14.7 0.0 5.2 5 1 0 5 5 5 2 Leucine Rich repeat LRR_1 PF00560.33 ORF59550 - 0.00095 19.4 1.4 13 6.8 0.4 4.3 3 1 1 4 4 4 1 Leucine Rich Repeat Integrase_Zn PF02022.19 ORF5875 - 0.02 14.8 0.1 0.02 14.8 0.1 1.7 2 0 0 2 2 2 0 Integrase Zinc binding domain Atg8 PF02991.16 ORF58146 - 4.8e-37 126.3 0.1 5.6e-37 126.1 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF58146 - 8.7e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 GAF PF01590.26 ORF57670 - 0.0013 19.3 0.0 0.0018 18.9 0.0 1.2 1 0 0 1 1 1 1 GAF domain KR PF08659.10 ORF57670 - 0.1 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 KR domain SAP130_C PF16014.5 ORF57653 - 0.19 10.8 5.1 0.21 10.7 5.1 1.0 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus DUF2533 PF10752.9 ORF57214 - 0.12 12.8 0.1 0.18 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) EF-hand_7 PF13499.6 ORF56746 - 2.1e-14 53.7 1.6 2.1e-07 31.3 0.2 2.0 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF56746 - 7.2e-14 50.2 5.4 1.2e-06 27.6 0.6 2.8 3 1 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF56746 - 1.3e-13 50.6 2.7 3.6e-07 29.9 0.2 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF56746 - 1.7e-09 36.8 2.3 0.0042 16.9 0.1 3.5 3 1 1 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF56746 - 0.0001 21.6 7.7 0.0024 17.3 0.5 2.8 2 1 1 3 3 3 2 EF hand EF-hand_9 PF14658.6 ORF56746 - 0.042 14.2 0.7 5.1 7.5 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_4 PF12763.7 ORF56746 - 0.16 12.0 3.5 3.5 7.6 0.9 2.1 1 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Rimk_N PF18030.1 ORF56196 - 0.016 15.6 0.0 0.035 14.5 0.0 1.5 2 0 0 2 2 2 0 RimK PreATP-grasp domain DrsE PF02635.15 ORF55809 - 2.5e-23 82.7 0.0 2.8e-23 82.5 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family GET2 PF08690.10 ORF55478 - 5.3 6.6 11.0 5.9 6.5 11.0 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 DUF2533 PF10752.9 ORF54815 - 0.12 12.8 0.1 0.18 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) AFP_2 PF18815.1 ORF54528 - 0.54 10.6 2.2 0.73 10.1 0.2 2.0 2 0 0 2 2 2 0 Bacterial antifreeze protein repeat Spc110_C PF18520.1 ORF54489 - 0.12 12.0 0.2 0.27 10.9 0.2 1.5 1 0 0 1 1 1 0 Spindle pole body component 110 C-terminal domain FlaC_arch PF05377.11 ORF53914 - 0.0031 17.9 0.5 0.0064 16.9 0.5 1.6 1 0 0 1 1 1 1 Flagella accessory protein C (FlaC) Atg14 PF10186.9 ORF53914 - 0.0046 16.1 2.7 0.0054 15.9 2.7 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 RRF_GI PF12614.8 ORF53914 - 0.02 15.0 0.9 0.025 14.7 0.9 1.2 1 0 0 1 1 1 0 Ribosome recycling factor MIP-T3_C PF17749.1 ORF53914 - 0.032 14.2 2.7 0.04 13.9 2.7 1.2 1 0 0 1 1 1 0 Microtubule-binding protein MIP-T3 C-terminal region DivIC PF04977.15 ORF53914 - 0.035 13.9 1.5 0.04 13.7 0.3 1.7 1 1 1 2 2 2 0 Septum formation initiator DUF2203 PF09969.9 ORF53914 - 0.088 13.5 1.0 0.13 13.0 0.9 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF848 PF05852.11 ORF53914 - 0.11 12.6 1.8 0.13 12.4 1.8 1.1 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Abhydrolase_3 PF07859.13 ORF53824 - 0.00018 21.5 0.0 0.0002 21.3 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold YiaAB PF05360.14 ORF53651 - 5.3e-11 42.6 13.4 3.2e-08 33.7 5.1 2.1 2 0 0 2 2 2 2 yiaA/B two helix domain DUF3040 PF11239.8 ORF53651 - 2.9 8.2 6.6 22 5.4 2.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) UNC-79 PF14776.6 ORF53279 - 0.14 10.8 0.3 0.17 10.6 0.3 1.0 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 Ocnus PF05005.15 ORF5282 - 2.5e-26 91.9 0.0 2.8e-26 91.7 0.0 1.1 1 0 0 1 1 1 1 Janus/Ocnus family (Ocnus) VWD PF00094.25 ORF5282 - 0.082 13.2 0.0 0.089 13.1 0.0 1.2 1 1 0 1 1 1 0 von Willebrand factor type D domain Baculo_LEF-10 PF07206.11 ORF5282 - 0.21 11.8 0.5 0.8 9.9 0.2 1.9 2 0 0 2 2 2 0 Baculovirus late expression factor 10 (LEF-10) FAS_N PF17828.1 ORF5204 - 0.06 13.3 0.1 0.071 13.1 0.1 1.3 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta Spexin PF15171.6 ORF5204 - 0.12 12.6 0.1 0.19 12.0 0.1 1.4 1 1 0 1 1 1 0 Neuropeptide secretory protein family, NPQ, spexin CX9C PF16860.5 ORF51749 - 0.27 11.3 8.9 3.4 7.7 0.2 3.0 3 0 0 3 3 3 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, DUF5102 PF17104.5 ORF51584 - 0.2 11.7 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5102) EMC3_TMCO1 PF01956.16 ORF51433 - 1.2 8.8 4.0 0.82 9.4 2.6 1.4 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like DUF2533 PF10752.9 ORF49451 - 0.12 12.8 0.1 0.18 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) CENP-H PF05837.12 ORF48656 - 0.62 10.5 8.4 1.3 9.4 1.8 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DUF4407 PF14362.6 ORF48656 - 0.63 9.3 6.0 0.8 9.0 6.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1968 PF09291.10 ORF48118 - 0.024 14.7 2.9 0.61 10.2 0.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1968) Shufflon_N PF04917.12 ORF48118 - 0.081 12.4 0.1 0.088 12.2 0.1 1.0 1 0 0 1 1 1 0 Bacterial shufflon protein, N-terminal constant region MRP-L27 PF09809.9 ORF48113 - 1.8e-09 37.4 0.0 2.2e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L27 UQ_con PF00179.26 ORF48065 - 1.6e-41 141.3 0.0 1.7e-41 141.1 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF48065 - 0.00084 19.6 0.1 0.001 19.3 0.1 1.3 1 1 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 ORF48065 - 0.001 18.8 0.0 0.0012 18.6 0.0 1.2 1 1 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 ORF48065 - 0.035 14.0 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 UEV domain UFC1 PF08694.11 ORF48065 - 0.083 12.5 0.0 0.092 12.4 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin-fold modifier-conjugating enzyme 1 DUF316 PF03761.15 ORF47726 - 0.061 12.9 0.1 0.093 12.3 0.1 1.3 1 1 0 1 1 1 0 Chymotrypsin family Peptidase-S1 LIN37 PF15306.6 ORF47726 - 0.17 12.1 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 LIN37 Cytochrom_C552 PF02335.15 ORF47116 - 0.0071 15.3 0.1 0.0085 15.1 0.1 1.1 1 0 0 1 1 1 1 Cytochrome c552 Cytochrom_CIII PF02085.16 ORF47116 - 0.016 15.5 1.7 0.027 14.8 1.7 1.4 1 0 0 1 1 1 0 Class III cytochrome C family SERTA PF06031.13 ORF46703 - 0.24 11.1 0.7 1.5 8.6 0.2 2.1 2 0 0 2 2 2 0 SERTA motif DNA_ligase_A_N PF04675.14 ORF46643 - 3.1e-20 73.2 0.5 3.4e-20 73.1 0.5 1.0 1 0 0 1 1 1 1 DNA ligase N terminus Glycos_transf_4 PF00953.21 ORF4642 - 4.6e-08 33.2 3.5 4.6e-08 33.2 3.5 1.4 2 0 0 2 2 2 1 Glycosyl transferase family 4 Pigment_DH PF06324.11 ORF4642 - 0.025 14.6 0.7 0.083 13.0 0.2 2.0 2 0 0 2 2 2 0 Pigment-dispersing hormone (PDH) DUF3413 PF11893.8 ORF4642 - 2.9 7.0 10.0 4.2 6.5 10.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) CDRT4 PF15213.6 ORF46287 - 0.051 14.2 0.0 0.7 10.5 0.1 2.0 1 1 1 2 2 2 0 CMT1A duplicated region transcript 4 protein TGBp3 PF02495.17 ORF46047 - 0.0048 16.5 0.2 0.014 15.1 0.2 1.8 1 0 0 1 1 1 1 Triple gene block 3 Herpes_LMP1 PF05297.11 ORF46047 - 1.2 8.2 6.5 1.5 8.0 6.5 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) PARP PF00644.20 ORF45425 - 3.8e-27 95.1 0.0 4.2e-27 95.0 0.0 1.0 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Anoctamin PF04547.12 ORF45249 - 0.13 11.1 2.7 0.15 10.9 2.7 1.1 1 0 0 1 1 1 0 Calcium-activated chloride channel FA_desaturase PF00487.24 ORF45249 - 0.14 12.0 7.2 0.16 11.8 7.2 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2207 PF09972.9 ORF45249 - 0.33 9.6 8.3 0.35 9.6 8.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Hydrolase PF00702.26 ORF45024 - 2e-06 28.2 0.0 2.4e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF45024 - 0.0003 20.6 0.1 0.00046 20.0 0.1 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF4781 PF16013.5 ORF44997 - 0.063 12.1 3.2 0.073 11.9 3.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) ABC_tran PF00005.27 ORF44896 - 4.7e-09 36.9 0.0 7.6e-09 36.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF44896 - 7.9e-05 22.2 0.3 9.4e-05 21.9 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF5507 PF17612.2 ORF44896 - 0.06 13.1 0.1 0.081 12.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5507) DRMBL PF07522.14 ORF44438 - 0.33 11.2 3.8 4.2 7.6 0.5 2.2 1 1 1 2 2 2 0 DNA repair metallo-beta-lactamase TLD PF07534.16 ORF44403 - 4e-20 72.5 1.2 4.4e-20 72.3 1.2 1.0 1 0 0 1 1 1 1 TLD Thr_dehydrat_C PF00585.18 ORF43391 - 3.9e-31 106.7 0.0 5.4e-28 96.6 0.0 2.0 2 0 0 2 2 2 2 C-terminal regulatory domain of Threonine dehydratase TerY_C PF15616.6 ORF43054 - 0.13 12.4 1.0 0.66 10.1 0.2 1.9 1 1 1 2 2 2 0 TerY-C metal binding domain TMEM206 PF15122.6 ORF42753 - 0.0038 16.4 4.3 0.0047 16.1 4.3 1.2 1 1 0 1 1 1 1 TMEM206 protein family DUF4207 PF13904.6 ORF42753 - 0.019 14.7 29.6 0.03 14.0 29.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4207) DUF515 PF04415.12 ORF42753 - 0.74 8.1 11.6 0.19 10.1 8.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF515) DUF5409 PF17421.2 ORF42753 - 2.9 8.7 6.5 0.2 12.4 1.1 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5409) PspB PF06667.12 ORF42753 - 9.6 6.3 8.1 11 6.2 0.9 2.5 2 0 0 2 2 2 0 Phage shock protein B SPT16 PF08644.11 ORF4271 - 0.042 14.0 0.1 0.049 13.8 0.1 1.1 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) LANC_like PF05147.13 ORF4271 - 0.076 11.6 0.1 0.09 11.3 0.1 1.1 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein HSP33 PF01430.19 ORF42025 - 0.042 13.3 0.1 0.065 12.6 0.1 1.2 1 1 0 1 1 1 0 Hsp33 protein Ribosomal_S11 PF00411.19 ORF41699 - 0.0026 18.2 0.1 0.013 15.9 0.1 1.8 1 1 0 1 1 1 1 Ribosomal protein S11 RVT_3 PF13456.6 ORF41699 - 0.027 14.3 0.0 0.05 13.4 0.0 1.5 1 1 0 1 1 1 0 Reverse transcriptase-like RHS PF03527.14 ORF41699 - 0.19 11.5 0.0 0.34 10.7 0.0 1.4 1 0 0 1 1 1 0 RHS protein EF1G PF00647.19 ORF4071 - 0.045 13.8 0.1 0.059 13.4 0.1 1.4 1 1 0 1 1 1 0 Elongation factor 1 gamma, conserved domain Amidinotransf PF02274.17 ORF40423 - 6e-21 74.9 0.4 6.6e-21 74.8 0.4 1.0 1 0 0 1 1 1 1 Amidinotransferase DUF1934 PF09148.10 ORF40423 - 0.045 13.8 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1934) Rbx_binding PF18113.1 ORF40302 - 0.44 10.4 3.9 1.7 8.4 0.6 2.5 2 1 0 2 2 2 0 Rubredoxin binding C-terminal domain Resistin PF06954.11 ORF38992 - 0.1 13.2 0.1 0.15 12.6 0.1 1.2 1 0 0 1 1 1 0 Resistin DarA_N PF18788.1 ORF38992 - 0.15 12.2 0.0 0.17 12.0 0.0 1.5 1 1 0 1 1 1 0 Defence against restriction A N-terminal DCB PF16213.5 ORF38300 - 0.06 13.0 0.0 0.085 12.5 0.0 1.2 1 0 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 FAS_N PF17828.1 ORF38046 - 0.06 13.3 0.1 0.071 13.1 0.1 1.3 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta Spexin PF15171.6 ORF38046 - 0.12 12.6 0.1 0.19 12.0 0.1 1.4 1 1 0 1 1 1 0 Neuropeptide secretory protein family, NPQ, spexin CcmD PF04995.14 ORF38038 - 0.35 11.0 0.9 0.88 9.7 0.9 1.7 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) DUF3959 PF13105.6 ORF37604 - 0.9 9.0 3.9 0.99 8.9 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Atg8 PF02991.16 ORF37099 - 4.8e-37 126.3 0.1 5.6e-37 126.1 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF37099 - 8.7e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 RCC1_2 PF13540.6 ORF36786 - 2.2e-09 36.9 6.9 0.00025 20.7 0.3 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF36786 - 0.0019 18.3 0.7 13 5.9 0.1 3.0 2 1 0 3 3 3 3 Uncharacterised ACR, YagE family COG1723 PheRS_DBD2 PF18554.1 ORF36786 - 3.2 7.8 5.1 6.1 6.9 0.3 2.6 3 0 0 3 3 3 0 PheRS DNA binding domain 2 HTH_5 PF01022.20 ORF35970 - 2.3e-17 62.6 2.2 3.9e-17 61.8 2.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 ORF35970 - 3.5e-10 39.8 0.3 5.6e-10 39.1 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 ORF35970 - 0.0034 17.4 0.1 0.0069 16.4 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn helix HTH_24 PF13412.6 ORF35970 - 0.024 14.2 0.2 0.053 13.1 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 ORF35970 - 0.035 14.6 0.0 0.074 13.6 0.0 1.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain MarR_2 PF12802.7 ORF35970 - 0.092 12.7 0.2 0.24 11.3 0.1 1.7 2 0 0 2 2 2 0 MarR family Pkinase PF00069.25 ORF33399 - 3.1e-21 75.9 0.1 3.3e-21 75.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33399 - 4.7e-14 52.3 0.0 5.3e-14 52.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF33399 - 0.026 13.9 0.0 0.026 13.9 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Kdo PF06293.14 ORF33399 - 0.086 12.2 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family GFA PF04828.14 ORF32767 - 5.4e-06 26.7 0.0 7e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme Nudix_N_2 PF14803.6 ORF32767 - 0.0009 19.1 0.2 0.0026 17.6 0.1 1.8 2 0 0 2 2 2 1 Nudix N-terminal GATA PF00320.27 ORF32767 - 0.0039 16.8 0.0 0.0082 15.7 0.0 1.5 1 0 0 1 1 1 1 GATA zinc finger DUF1428 PF07237.11 ORF32533 - 2.9e-47 159.1 1.8 3.2e-47 158.9 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1428) NIPSNAP PF07978.13 ORF32533 - 0.013 15.7 0.1 0.019 15.2 0.1 1.2 1 0 0 1 1 1 0 NIPSNAP CcmD PF04995.14 ORF32401 - 0.35 11.0 0.9 0.88 9.7 0.9 1.7 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Rbx_binding PF18113.1 ORF31921 - 0.44 10.4 3.9 1.7 8.4 0.6 2.5 2 1 0 2 2 2 0 Rubredoxin binding C-terminal domain IFT81_CH PF18383.1 ORF31454 - 0.049 13.9 3.8 0.065 13.5 3.8 1.2 1 0 0 1 1 1 0 Intraflagellar transport 81 calponin homology domain SRF-TF PF00319.18 ORF31454 - 0.063 12.8 0.1 4.5 6.9 0.0 2.3 2 0 0 2 2 2 0 SRF-type transcription factor (DNA-binding and dimerisation domain) Syntaxin-6_N PF09177.11 ORF31454 - 0.21 12.1 5.1 0.29 11.7 5.1 1.2 1 0 0 1 1 1 0 Syntaxin 6, N-terminal DivIC PF04977.15 ORF31454 - 0.34 10.7 5.5 0.63 9.8 5.5 1.6 1 0 0 1 1 1 0 Septum formation initiator SlyX PF04102.12 ORF31454 - 0.8 10.4 7.4 0.79 10.4 4.6 2.0 1 1 1 2 2 2 0 SlyX YabA PF06156.13 ORF31454 - 2.5 8.8 9.8 1.6 9.4 7.0 1.8 1 1 1 2 2 2 0 Initiation control protein YabA DER1 PF04511.15 ORF31369 - 0.0026 17.7 3.4 0.0032 17.4 3.4 1.1 1 0 0 1 1 1 1 Der1-like family Rhomboid PF01694.22 ORF31369 - 0.0066 16.5 1.1 0.0075 16.3 1.1 1.1 1 0 0 1 1 1 1 Rhomboid family DUF4793 PF16041.5 ORF29736 - 0.082 13.1 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4793) TRCF PF03461.15 ORF28831 - 0.0081 16.5 2.4 0.0081 16.5 2.4 2.2 1 1 1 2 2 2 1 TRCF domain PS-DH PF14765.6 ORF27877 - 1.8e-06 27.4 0.1 2.8e-06 26.8 0.0 1.3 1 1 0 1 1 1 1 Polyketide synthase dehydratase Cytochrom_C PF00034.21 ORF27251 - 6.2e-10 40.1 0.1 7.3e-10 39.9 0.1 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF27251 - 2.8e-05 24.3 1.1 5e-05 23.5 1.1 1.5 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF27251 - 0.001 18.8 0.1 0.0025 17.5 0.0 1.6 2 0 0 2 2 2 1 Cytochrome c-550 domain ATX_III PF08098.11 ORF26694 - 0.39 10.8 10.7 1.2 9.2 0.3 2.9 3 0 0 3 3 3 0 Anemonia sulcata toxin III family Chloroa_b-bind PF00504.21 ORF26629 - 3.7e-10 40.6 0.2 4.4e-10 40.3 0.2 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein PhetRS_B1 PF18262.1 ORF26185 - 0.077 13.2 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain RNase_T PF00929.24 ORF26185 - 0.11 13.1 0.0 0.15 12.6 0.0 1.2 1 0 0 1 1 1 0 Exonuclease PP2C PF00481.21 ORF25918 - 1.9e-06 27.8 0.0 1.9e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C ArsC PF03960.15 ORF25918 - 0.2 11.7 0.0 0.37 10.8 0.0 1.4 1 0 0 1 1 1 0 ArsC family pKID PF02173.17 ORF25830 - 0.053 13.0 1.0 0.25 10.9 0.2 2.3 2 0 0 2 2 2 0 pKID domain CK_II_beta PF01214.18 ORF25719 - 2e-30 105.9 0.0 2.4e-30 105.7 0.0 1.0 1 0 0 1 1 1 1 Casein kinase II regulatory subunit DUF4435 PF14491.6 ORF25508 - 0.015 15.2 4.5 0.017 15.0 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) TTKRSYEDQ PF10212.9 ORF25508 - 0.29 10.1 8.9 0.31 10.0 8.9 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein Peptidase_S49_N PF08496.10 ORF25508 - 0.44 10.6 9.8 0.5 10.4 9.8 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF1764 PF08576.10 ORF25508 - 6.6 7.7 11.3 7.7 7.5 10.9 1.4 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF1764) VBS PF08913.10 ORF25500 - 0.0012 19.3 0.0 0.0014 19.0 0.0 1.1 1 0 0 1 1 1 1 Vinculin Binding Site RGS PF00615.19 ORF25500 - 0.033 14.4 0.6 0.046 14.0 0.6 1.3 1 0 0 1 1 1 0 Regulator of G protein signaling domain HRCT1 PF15758.5 ORF23879 - 0.23 12.4 6.3 0.18 12.8 4.8 1.6 2 0 0 2 2 2 0 Histidine-rich carboxyl terminus protein 1 DUF4446 PF14584.6 ORF23754 - 0.0035 17.3 0.8 0.0056 16.7 0.8 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF4446) CRR7 PF12095.8 ORF23754 - 0.042 14.3 0.6 0.073 13.5 0.5 1.5 1 1 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 DASH_Dam1 PF08653.10 ORF23754 - 0.044 13.6 0.6 0.78 9.6 0.1 2.4 2 0 0 2 2 2 0 DASH complex subunit Dam1 DUF3810 PF12725.7 ORF23754 - 0.083 12.2 1.4 0.16 11.3 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) GST_N PF02798.20 ORF23187 - 1.8e-12 47.4 0.0 2.7e-12 46.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF23187 - 1.2e-05 25.6 0.0 1.7e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF23187 - 0.039 14.3 0.0 0.055 13.8 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Methyltransf_21 PF05050.12 ORF22618 - 2.5e-08 34.1 0.0 3.2e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain Lipoprotein_7 PF01540.16 ORF22238 - 0.0041 16.5 3.1 0.0042 16.4 3.1 1.2 1 0 0 1 1 1 1 Adhesin lipoprotein DUF725 PF05267.12 ORF22238 - 0.0053 16.7 3.8 0.0069 16.4 3.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF725) DUF4200 PF13863.6 ORF22238 - 0.0082 16.5 6.8 0.012 16.0 6.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) Tropomyosin_1 PF12718.7 ORF22238 - 0.0091 16.2 4.9 0.011 15.9 4.9 1.2 1 0 0 1 1 1 1 Tropomyosin like Laminin_II PF06009.12 ORF22238 - 0.017 15.2 2.1 0.02 14.9 2.1 1.1 1 0 0 1 1 1 0 Laminin Domain II Tho2 PF11262.8 ORF22238 - 0.044 13.0 3.6 0.054 12.7 3.6 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 HMMR_N PF15905.5 ORF22238 - 0.075 12.5 6.0 0.079 12.4 6.0 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF1664 PF07889.12 ORF22238 - 0.23 11.5 5.1 0.3 11.1 4.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) LMBR1 PF04791.16 ORF22238 - 0.33 9.8 2.0 0.36 9.7 2.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DivIC PF04977.15 ORF22238 - 1.4 8.7 6.3 2.6 7.9 3.4 2.2 1 1 1 2 2 2 0 Septum formation initiator RSV_NS2 PF03113.14 ORF22093 - 0.12 12.4 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Respiratory synctial virus non-structural protein NS2 DUF4051 PF13260.6 ORF22093 - 2.5 7.9 7.7 1.3 8.8 0.3 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF4051) Atg8 PF02991.16 ORF21938 - 1.7e-29 102.1 0.1 1.9e-29 101.9 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF21938 - 1.2e-06 28.8 0.1 1.5e-06 28.5 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 CDC73_C PF05179.14 ORF21738 - 0.035 13.8 0.2 0.069 12.8 0.2 1.5 1 1 0 1 1 1 0 RNA pol II accessory factor, Cdc73 family, C-terminal Mucin PF01456.17 ORF21349 - 0.077 13.0 23.3 0.088 12.8 23.3 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein FSA_C PF10479.9 ORF21349 - 2.2 6.3 15.5 2.3 6.2 15.5 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Copine PF07002.16 ORF20577 - 1.6e-33 116.0 0.6 1.9e-33 115.8 0.6 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF20577 - 9.8e-05 22.5 0.1 0.00012 22.2 0.1 1.3 1 1 0 1 1 1 1 vWA found in TerF C terminus V-SNARE_C PF12352.8 ORF2047 - 7.5e-12 45.4 2.0 9.4e-12 45.0 1.7 1.3 1 1 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 ORF2047 - 0.015 15.2 0.4 0.029 14.3 0.4 1.5 1 1 0 1 1 1 0 Sec20 YoeB_toxin PF06769.14 ORF2047 - 0.034 14.2 0.0 0.099 12.7 0.0 1.7 1 1 1 2 2 2 0 YoeB-like toxin of bacterial type II toxin-antitoxin system Peptidase_S24 PF00717.23 ORF19193 - 3.4e-05 23.7 0.5 4.5e-05 23.3 0.5 1.3 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 ORF19193 - 0.00088 19.1 0.0 0.0036 17.1 0.0 1.8 1 1 1 2 2 2 1 Signal peptidase, peptidase S26 TMEM206 PF15122.6 ORF18573 - 0.0038 16.4 4.3 0.0047 16.1 4.3 1.2 1 1 0 1 1 1 1 TMEM206 protein family DUF4207 PF13904.6 ORF18573 - 0.019 14.7 29.6 0.03 14.0 29.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4207) DUF515 PF04415.12 ORF18573 - 0.74 8.1 11.6 0.19 10.1 8.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF515) DUF5409 PF17421.2 ORF18573 - 2.9 8.7 6.5 0.2 12.4 1.1 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5409) PspB PF06667.12 ORF18573 - 9.6 6.3 8.1 11 6.2 0.9 2.5 2 0 0 2 2 2 0 Phage shock protein B LAGLIDADG_2 PF03161.13 ORF18365 - 0.018 15.1 0.0 0.11 12.5 0.0 1.9 1 1 1 2 2 2 0 LAGLIDADG DNA endonuclease family PIG-Y PF15159.6 ORF1744 - 0.032 15.2 0.5 0.082 13.8 0.5 1.7 1 1 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DIX PF00778.17 ORF17256 - 4.7e-12 45.6 0.3 6.6e-12 45.1 0.3 1.2 1 0 0 1 1 1 1 DIX domain YdjO PF14169.6 ORF16852 - 4.4 7.1 11.3 4.2 7.2 1.3 2.5 3 0 0 3 3 3 0 Cold-inducible protein YdjO Pkinase PF00069.25 ORF16616 - 2.1e-05 24.0 0.1 2.1e-05 24.0 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain TspO_MBR PF03073.15 ORF16467 - 0.0026 17.8 1.1 0.003 17.6 1.1 1.1 1 0 0 1 1 1 1 TspO/MBR family DUF983 PF06170.12 ORF16467 - 0.032 14.6 0.9 0.046 14.1 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF983) DUF3149 PF11346.8 ORF16467 - 0.13 11.9 6.7 1.1 8.9 6.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) v110 PF01639.17 ORF16403 - 0.069 13.0 0.1 0.096 12.6 0.1 1.3 1 0 0 1 1 1 0 Viral family 110 Pox_I5 PF04713.12 ORF1631 - 0.045 13.8 0.2 0.064 13.3 0.2 1.2 1 0 0 1 1 1 0 Poxvirus protein I5 Trehalase PF01204.18 ORF1631 - 0.087 11.6 0.0 0.092 11.6 0.0 1.0 1 0 0 1 1 1 0 Trehalase Jagunal PF07086.12 ORF1631 - 0.09 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis SIT PF15330.6 ORF16085 - 0.097 13.1 0.4 0.14 12.6 0.4 1.4 1 1 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT BCNT PF07572.12 ORF14767 - 1.9e-18 66.3 2.6 1.9e-18 66.3 2.6 1.7 2 0 0 2 2 2 1 Bucentaur or craniofacial development BLOC1_2 PF10046.9 ORF14767 - 0.00079 19.7 1.5 0.00079 19.7 1.5 1.9 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sterile PF03015.19 ORF14767 - 0.082 13.1 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Male sterility protein TMF_DNA_bd PF12329.8 ORF14767 - 0.27 11.2 13.6 0.061 13.3 6.5 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding TPR_12 PF13424.6 ORF14666 - 5.4e-09 36.2 0.5 1.9e-05 24.9 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF14666 - 6.8e-07 28.9 8.5 0.00093 19.1 0.1 3.0 4 0 0 4 4 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF14666 - 1.6e-06 27.8 3.2 0.00064 19.7 0.3 2.8 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF14666 - 1.1e-05 25.8 1.8 0.073 13.6 0.2 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF14666 - 0.00018 21.3 3.3 0.31 11.2 0.1 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF14666 - 0.00027 21.5 0.1 0.21 12.3 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF14666 - 0.002 18.4 2.8 0.05 14.0 0.0 3.3 4 0 0 4 4 3 1 Tetratricopeptide repeat Sel1 PF08238.12 ORF14666 - 0.002 18.7 0.4 1.4 9.7 0.1 2.5 2 0 0 2 2 2 2 Sel1 repeat TPR_1 PF00515.28 ORF14666 - 0.0044 16.8 11.7 0.041 13.7 1.3 2.9 4 0 0 4 4 3 2 Tetratricopeptide repeat SPO22 PF08631.10 ORF14666 - 0.018 14.5 2.1 0.33 10.4 0.4 2.3 2 1 0 2 2 2 0 Meiosis protein SPO22/ZIP4 like ANAPC3 PF12895.7 ORF14666 - 0.021 15.0 6.9 0.29 11.4 6.4 2.2 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 Tcf25 PF04910.14 ORF14666 - 0.022 13.8 0.7 0.035 13.2 0.2 1.5 1 1 0 1 1 1 0 Transcriptional repressor TCF25 TPR_11 PF13414.6 ORF14666 - 0.057 13.1 7.4 0.43 10.3 2.2 2.4 2 0 0 2 2 2 0 TPR repeat TPR_14 PF13428.6 ORF14666 - 0.069 14.0 0.1 5.5 8.1 0.0 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF14666 - 0.18 11.7 0.8 28 4.7 0.0 2.8 3 0 0 3 3 2 0 Tetratricopeptide repeat MIT PF04212.18 ORF14666 - 0.26 11.4 5.7 1.4 9.1 0.9 2.7 2 1 0 2 2 2 0 MIT (microtubule interacting and transport) domain GST_N PF02798.20 ORF13217 - 2.2e-10 40.7 0.0 3.3e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF13217 - 0.0039 17.6 0.0 0.0049 17.3 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF13217 - 0.038 14.3 0.0 0.068 13.5 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain PP2C PF00481.21 ORF13131 - 1.6e-08 34.5 0.0 2.4e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF13131 - 0.0017 18.3 0.0 0.0021 18.0 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Pirin_C_2 PF17954.1 ORF13046 - 3.3e-10 40.0 0.0 4.4e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Quercetinase C-terminal cupin domain Laminin_G_3 PF13385.6 ORF13046 - 0.19 11.9 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Concanavalin A-like lectin/glucanases superfamily Trp_leader2 PF08056.11 ORF12726 - 0.16 11.9 1.2 0.35 10.9 0.1 2.0 2 0 0 2 2 2 0 Tryptophan operon leader peptide Atg8 PF02991.16 ORF11603 - 1.7e-29 102.1 0.1 1.9e-29 101.9 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF11603 - 1.2e-06 28.8 0.1 1.5e-06 28.5 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 adh_short PF00106.25 ORF112046 - 1.9e-09 37.3 0.1 4.2e-09 36.1 0.0 1.6 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF112046 - 8.2e-06 25.5 0.1 1.1e-05 25.2 0.1 1.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1282 PF06930.12 ORF111547 - 3.4e-21 75.8 6.5 4.2e-21 75.5 6.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1282) Yip1 PF04893.17 ORF111547 - 7.2e-15 55.1 11.3 7.2e-15 55.1 11.3 1.7 1 1 1 2 2 2 1 Yip1 domain B12D PF06522.11 ORF111547 - 0.078 12.8 2.9 0.24 11.2 2.9 1.8 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit UPF0164 PF03687.13 ORF111403 - 0.019 13.8 0.1 0.021 13.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0164) TMCO5 PF14992.6 ORF111274 - 0.044 13.4 9.6 0.054 13.1 9.6 1.1 1 0 0 1 1 1 0 TMCO5 family Jnk-SapK_ap_N PF09744.9 ORF111274 - 0.063 13.5 8.5 0.081 13.1 8.5 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 UPF0184 PF03670.13 ORF111274 - 0.16 12.3 5.1 0.077 13.4 2.9 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) Prominin PF05478.11 ORF111274 - 0.22 9.5 6.6 0.25 9.3 6.6 1.0 1 0 0 1 1 1 0 Prominin UPF0449 PF15136.6 ORF111274 - 0.76 10.3 9.9 1.4 9.4 9.9 1.5 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 LMBR1 PF04791.16 ORF111274 - 0.8 8.5 7.1 0.89 8.4 7.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ly49 PF08391.10 ORF111274 - 2 8.8 9.5 3 8.2 9.5 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region TMF_DNA_bd PF12329.8 ORF111274 - 2.1 8.4 9.5 2.7 8.1 8.7 1.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Ras PF00071.22 ORF110774 - 1.3e-35 122.4 0.2 1.4e-35 122.3 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF110774 - 3.1e-27 95.2 0.0 3.4e-27 95.0 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF110774 - 2.9e-09 36.6 0.1 2.9e-09 36.6 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF110774 - 3e-05 24.1 0.0 3.4e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF110774 - 0.01 15.7 0.1 0.026 14.4 0.0 1.7 1 1 0 1 1 1 0 RsgA GTPase Septin PF00735.18 ORF110774 - 0.032 13.5 0.1 0.076 12.3 0.1 1.7 1 1 0 1 1 1 0 Septin MCM PF00493.23 ORF110774 - 0.12 11.4 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_22 PF13401.6 ORF110774 - 0.17 12.2 0.0 0.17 12.2 0.0 1.4 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 ORF110774 - 0.19 12.3 0.0 2.3 8.8 0.0 2.2 2 1 1 3 3 3 0 ABC transporter Ras PF00071.22 ORF110418 - 2e-24 86.0 0.1 2.2e-24 85.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF110418 - 5.5e-18 65.3 0.0 6.1e-18 65.2 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF110418 - 7.9e-06 25.9 0.0 8.9e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Arf PF00025.21 ORF110418 - 1.6e-05 24.4 0.0 1.9e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF110418 - 0.00074 18.9 0.0 0.00089 18.7 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region AAA_16 PF13191.6 ORF110418 - 0.0047 17.3 0.0 0.0059 17.0 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 ORF110418 - 0.0082 15.9 0.2 0.012 15.4 0.2 1.3 1 1 0 1 1 1 1 AAA domain DUF4917 PF16263.5 ORF110418 - 0.0096 15.3 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4917) AAA_29 PF13555.6 ORF110418 - 0.05 13.4 0.1 0.085 12.6 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 ORF110418 - 0.057 13.9 0.0 0.079 13.5 0.0 1.4 1 0 0 1 1 1 0 ABC transporter CPT PF07931.12 ORF110418 - 0.064 13.1 0.0 0.1 12.5 0.0 1.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein RsgA_GTPase PF03193.16 ORF110418 - 0.079 12.9 0.1 0.12 12.3 0.1 1.5 1 1 0 1 1 1 0 RsgA GTPase SP24 PF16504.5 ORF110418 - 0.085 12.9 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Putative virion membrane protein of plant and insect virus cobW PF02492.19 ORF110418 - 0.13 11.9 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SRPRB PF09439.10 ORF110418 - 0.14 11.6 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Atg8 PF02991.16 ORF109827 - 4.8e-37 126.3 0.1 5.6e-37 126.1 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF109827 - 8.7e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 AP2 PF00847.20 ORF109611 - 0.0011 19.2 0.1 0.0027 17.9 0.0 1.7 2 0 0 2 2 2 1 AP2 domain DNA_pol_A_exo1 PF01612.20 ORF109218 - 4.5e-08 33.0 0.0 5e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 3'-5' exonuclease DUF2457 PF10446.9 ORF109139 - 0.48 9.5 2.6 0.53 9.4 2.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Mycobact_memb PF05423.13 ORF109069 - 0.1 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Mycobacterium membrane protein DUF4446 PF14584.6 ORF108807 - 0.0054 16.7 2.3 0.007 16.4 1.1 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF4446) CRR7 PF12095.8 ORF108807 - 0.024 15.1 1.1 0.07 13.6 0.4 1.9 1 1 1 2 2 2 0 Protein CHLORORESPIRATORY REDUCTION 7 DASH_Dam1 PF08653.10 ORF108807 - 0.071 12.9 0.7 0.78 9.6 0.1 2.4 2 1 0 2 2 2 0 DASH complex subunit Dam1 Spexin PF15171.6 ORF108807 - 0.13 12.5 0.3 0.18 12.0 0.3 1.4 1 1 0 1 1 1 0 Neuropeptide secretory protein family, NPQ, spexin DUF3507 PF12015.8 ORF108681 - 0.0056 16.4 0.0 0.0063 16.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3507) Fumble PF03630.14 ORF108482 - 3.8e-17 62.5 0.3 4.2e-17 62.3 0.3 1.0 1 0 0 1 1 1 1 Fumble E1_UFD PF09358.10 ORF107482 - 0.17 12.6 0.0 0.24 12.1 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin fold domain Herpes_capsid PF06112.11 ORF107179 - 1.3 9.0 6.2 1.8 8.6 6.2 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein TMCO5 PF14992.6 ORF106589 - 0.044 13.4 9.6 0.054 13.1 9.6 1.1 1 0 0 1 1 1 0 TMCO5 family Jnk-SapK_ap_N PF09744.9 ORF106589 - 0.063 13.5 8.5 0.081 13.1 8.5 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 UPF0184 PF03670.13 ORF106589 - 0.16 12.3 5.1 0.077 13.4 2.9 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) Prominin PF05478.11 ORF106589 - 0.22 9.5 6.6 0.25 9.3 6.6 1.0 1 0 0 1 1 1 0 Prominin UPF0449 PF15136.6 ORF106589 - 0.76 10.3 9.9 1.4 9.4 9.9 1.5 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 LMBR1 PF04791.16 ORF106589 - 0.8 8.5 7.1 0.89 8.4 7.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ly49 PF08391.10 ORF106589 - 2 8.8 9.5 3 8.2 9.5 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region TMF_DNA_bd PF12329.8 ORF106589 - 2.1 8.4 9.5 2.7 8.1 8.7 1.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Ras PF00071.22 ORF106180 - 1.8e-28 99.2 0.0 2e-28 99.1 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF106180 - 4.9e-21 75.2 0.0 5.4e-21 75.0 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF106180 - 0.00015 21.2 0.0 0.00018 21.0 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family DUF1581 PF07619.11 ORF105569 - 0.027 14.6 0.0 0.038 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1581) TOH_N PF12549.8 ORF105569 - 3.7 7.5 6.4 15 5.6 1.0 2.7 2 0 0 2 2 2 0 Tyrosine hydroxylase N terminal DUF3486 PF11985.8 ORF105184 - 0.046 14.1 0.0 0.081 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) Spore_Cse60 PF10957.8 ORF105184 - 0.22 11.6 3.0 31 4.7 0.3 3.1 2 1 1 3 3 3 0 Sporulation protein Cse60 RNase_PH PF01138.21 ORF104681 - 2.4e-13 50.7 0.0 2.8e-13 50.5 0.0 1.1 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 Levi_coat PF01819.17 ORF104681 - 0.063 13.3 0.0 0.15 12.1 0.0 1.5 1 1 0 1 1 1 0 Levivirus coat protein Pkinase PF00069.25 ORF103972 - 0.13 11.6 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain THEG PF14912.6 ORF103671 - 0.0065 16.9 1.4 0.065 13.7 1.3 2.2 1 1 0 1 1 1 1 Testicular haploid expressed repeat DDE_Tnp_IS240 PF13610.6 ORF103671 - 0.1 12.8 0.5 0.11 12.7 0.5 1.3 1 1 0 1 1 1 0 DDE domain Conotoxin PF02950.17 ORF101814 - 0.076 14.0 1.2 0.12 13.4 1.2 1.3 1 0 0 1 1 1 0 Conotoxin EF-hand_6 PF13405.6 ORF101612 - 9.4e-12 43.9 0.6 0.0001 21.9 0.1 2.8 2 1 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF101612 - 3e-11 43.6 3.9 2.7e-08 34.1 0.5 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF101612 - 5.1e-11 41.3 0.7 0.00028 20.2 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF101612 - 1.3e-10 40.2 2.1 4.8e-05 22.7 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF101612 - 2e-05 24.3 0.5 0.035 14.0 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF101612 - 7.4e-05 22.5 1.0 0.0012 18.6 0.1 2.5 2 0 0 2 2 2 1 EF hand Peptidase_M73 PF12389.8 ORF101612 - 0.0048 16.8 2.0 0.0052 16.7 2.0 1.2 1 0 0 1 1 1 1 Camelysin metallo-endopeptidase EF-hand_9 PF14658.6 ORF101612 - 0.015 15.6 0.0 1.3 9.3 0.0 2.3 2 0 0 2 2 2 0 EF-hand domain RE_HpaII PF09561.10 ORF101612 - 0.024 14.0 3.4 1.5 8.1 0.5 2.0 1 1 1 2 2 2 0 HpaII restriction endonuclease Cullin_binding PF03556.15 ORF101612 - 0.034 14.6 0.0 5.4 7.5 0.0 1.9 1 1 1 2 2 2 0 Cullin binding DUF1666 PF07891.12 ORF101587 - 0.22 11.2 0.0 0.3 10.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1666) Cwf_Cwc_15 PF04889.12 ORF100832 - 0.099 12.4 10.1 0.12 12.0 10.1 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein T4BSS_DotH_IcmK PF12293.8 ORF100832 - 0.12 11.6 0.1 0.14 11.4 0.1 1.2 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion DUF3486 PF11985.8 ORF100167 - 0.041 14.3 0.0 0.081 13.3 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3486) NifW PF03206.14 NODE_52009_length_346_cov_1.533762_g44092_i0reverse_frame_1 - 0.015 15.8 0.1 0.02 15.4 0.1 1.2 1 0 0 1 1 1 0 Nitrogen fixation protein NifW IL4 PF00727.18 NODE_52009_length_346_cov_1.533762_g44092_i0reverse_frame_1 - 0.074 13.3 1.9 0.095 12.9 0.8 1.7 2 0 0 2 2 2 0 Interleukin 4 Cobl PF09469.10 NODE_52006_length_346_cov_1.803859_g44089_i0forward_frame_1 - 0.0093 16.2 0.1 0.013 15.7 0.1 1.3 1 0 0 1 1 1 1 Cordon-bleu ubiquitin-like domain RhlB PF12300.8 NODE_52004_length_346_cov_1.852090_g44087_i0reverse_frame_1 - 0.061 13.5 6.4 0.085 13.0 6.4 1.3 1 0 0 1 1 1 0 ATP-dependent RNA helicase RhlB ASH PF15780.5 NODE_52003_length_346_cov_1.890675_g44086_i0reverse_frame_1 - 0.0011 19.2 0.1 0.078 13.2 0.0 2.2 2 0 0 2 2 2 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin TMEM131_like PF12371.8 NODE_52003_length_346_cov_1.890675_g44086_i0reverse_frame_1 - 0.076 13.3 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 Transmembrane protein 131-like PapD-like PF14874.6 NODE_52003_length_346_cov_1.890675_g44086_i0reverse_frame_1 - 0.11 12.7 0.1 0.86 9.8 0.0 1.9 2 0 0 2 2 2 0 Flagellar-associated PapD-like S1FA PF04689.13 NODE_52002_length_346_cov_1.971061_g44085_i0forward_frame_1 - 0.071 13.3 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 DNA binding protein S1FA TILa PF12714.7 NODE_51996_length_346_cov_2.257235_g44079_i0reverse_frame_1 - 0.099 12.6 0.1 0.15 12.0 0.1 1.2 1 0 0 1 1 1 0 TILa domain DAO PF01266.24 NODE_51995_length_346_cov_2.270096_g44078_i0forward_frame_1 - 9.6e-11 41.8 0.0 9.9e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase SepRS_C PF18006.1 NODE_51986_length_346_cov_2.913183_g44069_i0forward_frame_1 - 0.06 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 O-phosphoseryl-tRNA synthetase C-terminal domain Orthopox_B11R PF07033.11 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_1 - 0.13 12.0 3.3 0.13 12.1 2.3 1.5 1 1 0 1 1 1 0 Orthopoxvirus B11R protein DUF630 PF04783.12 NODE_51975_length_346_cov_12.980707_g44058_i0forward_frame_1 - 0.04 14.1 0.0 0.3 11.3 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF630) Noelin-1 PF12308.8 NODE_51971_length_346_cov_51.192926_g44054_i0reverse_frame_1 - 0.18 11.8 2.0 0.22 11.5 1.2 1.5 1 1 0 1 1 1 0 Neurogenesis glycoprotein Morc6_S5 PF17942.1 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_1 - 0.014 15.4 0.2 0.05 13.7 0.1 1.8 1 1 0 2 2 2 0 Morc6 ribosomal protein S5 domain 2-like PTCRA PF15028.6 NODE_51944_length_346_cov_284.475884_g44027_i0reverse_frame_1 - 1.2 8.8 7.8 1.4 8.6 3.1 2.2 1 1 1 2 2 2 0 Pre-T-cell antigen receptor DUF1664 PF07889.12 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.0019 18.2 0.9 0.0034 17.4 0.9 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.024 14.9 1.4 0.024 14.9 1.4 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1690 PF07956.11 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.028 14.9 1.1 0.038 14.4 0.8 1.4 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF948 PF06103.11 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.029 14.6 0.2 0.36 11.1 0.1 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) NAP PF00956.18 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.037 13.2 0.1 0.039 13.1 0.1 1.2 1 0 0 1 1 1 0 Nucleosome assembly protein (NAP) NPV_P10 PF05531.12 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.038 14.4 2.0 0.071 13.6 0.8 2.0 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF2937 PF11157.8 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.042 13.5 0.4 4.8 6.9 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2937) Prefoldin PF02996.17 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.049 13.6 3.5 8 6.4 0.2 2.7 1 1 2 3 3 3 0 Prefoldin subunit Laminin_II PF06009.12 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.057 13.4 1.0 0.11 12.5 1.0 1.6 1 1 0 1 1 1 0 Laminin Domain II XhlA PF10779.9 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.12 12.6 3.9 0.12 12.6 0.7 2.1 2 0 0 2 2 2 0 Haemolysin XhlA Terminase_3C PF17288.2 NODE_51932_length_346_cov_17528.887460_g44016_i0reverse_frame_1 - 0.13 12.6 3.0 0.11 12.8 1.5 1.4 1 1 0 1 1 1 0 Terminase RNAseH like domain zf-met PF12874.7 NODE_51932_length_346_cov_17528.887460_g44016_i0forward_frame_1 - 0.27 11.7 2.1 10 6.6 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type ATG27 PF09451.10 NODE_51932_length_346_cov_17528.887460_g44016_i0forward_frame_1 - 2.5 7.9 5.6 3.6 7.3 5.6 1.2 1 0 0 1 1 1 0 Autophagy-related protein 27 Rotamase PF00639.21 NODE_51930_length_347_cov_1.025641_g44014_i0reverse_frame_1 - 0.00092 20.1 0.4 0.068 14.1 0.1 2.1 2 0 0 2 2 2 2 PPIC-type PPIASE domain Rotamase_3 PF13616.6 NODE_51930_length_347_cov_1.025641_g44014_i0reverse_frame_1 - 0.005 17.4 0.3 0.0068 16.9 0.3 1.3 1 0 0 1 1 1 1 PPIC-type PPIASE domain DUF3290 PF11694.8 NODE_51928_length_347_cov_1.272436_g44012_i0forward_frame_1 - 0.2 11.6 4.5 0.13 12.3 1.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3290) XhlA PF10779.9 NODE_51921_length_347_cov_1.644231_g44005_i0reverse_frame_1 - 3.8 7.8 13.6 6 7.2 6.1 3.1 2 2 0 2 2 2 0 Haemolysin XhlA RVP_2 PF08284.11 NODE_51912_length_347_cov_2.112179_g43996_i0reverse_frame_1 - 0.019 14.7 0.4 0.024 14.4 0.4 1.2 1 0 0 1 1 1 0 Retroviral aspartyl protease gp32 PF08804.10 NODE_51908_length_347_cov_2.544872_g43992_i0reverse_frame_1 - 0.033 14.2 0.4 0.038 14.1 0.4 1.1 1 0 0 1 1 1 0 gp32 DNA binding protein like eIF3g PF12353.8 NODE_51908_length_347_cov_2.544872_g43992_i0reverse_frame_1 - 0.035 14.5 0.3 0.057 13.8 0.3 1.4 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit G Cons_hypoth698 PF03601.14 NODE_51907_length_347_cov_2.663462_g43991_i0forward_frame_1 - 0.034 13.0 0.3 0.054 12.4 0.3 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 698 Hpr_kinase_N PF02603.16 NODE_51905_length_347_cov_2.705128_g43989_i0forward_frame_1 - 0.078 13.0 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 HPr Serine kinase N terminus HIT PF01230.23 NODE_51903_length_347_cov_2.881410_g43987_i0forward_frame_1 - 1e-28 99.9 0.2 1.3e-28 99.6 0.2 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 NODE_51903_length_347_cov_2.881410_g43987_i0forward_frame_1 - 1.9e-22 79.9 0.1 2.1e-22 79.7 0.1 1.0 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding ODV-E18 PF10717.9 NODE_51898_length_347_cov_3.628205_g43982_i0forward_frame_1 - 0.026 14.4 0.1 0.034 14.0 0.1 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 TPP_enzyme_M_2 PF16582.5 NODE_51896_length_347_cov_3.875000_g43980_i0reverse_frame_1 - 0.051 13.3 0.0 0.055 13.2 0.0 1.1 1 0 0 1 1 1 0 Middle domain of thiamine pyrophosphate Csm1_N PF18504.1 NODE_51893_length_347_cov_10.006410_g43977_i0reverse_frame_1 - 0.0035 17.6 2.1 0.0035 17.6 2.1 1.8 2 0 0 2 2 2 1 Csm1 N-terminal domain Pox_A_type_inc PF04508.12 NODE_51893_length_347_cov_10.006410_g43977_i0reverse_frame_1 - 0.0087 15.9 0.7 0.023 14.5 0.7 1.8 1 0 0 1 1 1 1 Viral A-type inclusion protein repeat ERM PF00769.19 NODE_51893_length_347_cov_10.006410_g43977_i0reverse_frame_1 - 0.0092 15.8 7.3 0.0099 15.7 7.3 1.1 1 0 0 1 1 1 1 Ezrin/radixin/moesin family Guanylate_cyc_2 PF09778.9 NODE_51893_length_347_cov_10.006410_g43977_i0reverse_frame_1 - 0.042 13.2 2.6 0.048 13.0 2.6 1.2 1 0 0 1 1 1 0 Guanylylate cyclase TMF_DNA_bd PF12329.8 NODE_51893_length_347_cov_10.006410_g43977_i0reverse_frame_1 - 0.52 10.3 14.0 0.057 13.4 8.9 1.9 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Bunya_G2 PF03563.13 NODE_51892_length_347_cov_12.663462_g43976_i0reverse_frame_1 - 0.022 14.0 0.9 0.025 13.8 0.9 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 IL33 PF15095.6 NODE_51885_length_347_cov_57.977564_g43969_i0forward_frame_1 - 0.058 12.8 0.2 0.067 12.6 0.2 1.1 1 0 0 1 1 1 0 Interleukin 33 PsbH PF00737.20 NODE_51876_length_347_cov_67.961538_g43960_i0reverse_frame_1 - 0.16 11.7 0.4 0.28 11.0 0.4 1.3 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein DUF1211 PF06736.11 NODE_51874_length_347_cov_70.958333_g43958_i0forward_frame_1 - 1.3 9.5 6.9 0.18 12.3 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1211) CHASE2 PF05226.11 NODE_51869_length_347_cov_90.429487_g43953_i0reverse_frame_1 - 0.11 12.1 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 CHASE2 domain TatC PF00902.18 NODE_51864_length_347_cov_106.698718_g43948_i0forward_frame_1 - 0.04 13.7 0.2 0.04 13.7 0.2 1.2 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) DUF1574 PF07611.11 NODE_51860_length_347_cov_134.317308_g43944_i0reverse_frame_1 - 0.013 14.8 1.0 0.017 14.5 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1574) NSP2-B_epitope PF14757.6 NODE_51860_length_347_cov_134.317308_g43944_i0reverse_frame_1 - 0.035 13.8 0.0 0.035 13.8 0.0 1.1 1 0 0 1 1 1 0 Immunogenic region of nsp2 protein of arterivirus polyprotein Ribosomal_S13 PF00416.22 NODE_51856_length_347_cov_177.900641_g43940_i0reverse_frame_1 - 0.21 12.0 0.0 0.28 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S13/S18 RPAP2_Rtr1 PF04181.13 NODE_51853_length_347_cov_235.881410_g43937_i0forward_frame_1 - 0.018 15.4 0.3 0.027 14.8 0.3 1.3 1 1 0 1 1 1 0 Rtr1/RPAP2 family Pox_RNA_Pol_19 PF05320.12 NODE_51829_length_348_cov_2.006390_g43914_i0forward_frame_1 - 0.16 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit Pkinase PF00069.25 NODE_51820_length_348_cov_2.255591_g43905_i0reverse_frame_1 - 4.8e-06 26.1 0.0 7.7e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Josephin PF02099.17 NODE_51820_length_348_cov_2.255591_g43905_i0reverse_frame_1 - 0.0095 16.0 0.2 0.012 15.7 0.2 1.1 1 0 0 1 1 1 1 Josephin DUF2145 PF09916.9 NODE_51820_length_348_cov_2.255591_g43905_i0reverse_frame_1 - 0.016 14.9 0.2 0.018 14.7 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2145) Pkinase PF00069.25 NODE_51810_length_348_cov_2.690096_g43895_i0reverse_frame_1 - 0.00024 20.6 0.1 0.00031 20.2 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_51810_length_348_cov_2.690096_g43895_i0reverse_frame_1 - 0.0011 18.3 0.1 0.0014 18.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3845 PF12956.7 NODE_51810_length_348_cov_2.690096_g43895_i0forward_frame_1 - 0.4 10.1 2.2 0.51 9.8 2.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure ComGF PF15980.5 NODE_51809_length_348_cov_2.782748_g43894_i0reverse_frame_1 - 0.014 15.8 2.3 0.021 15.2 2.3 1.3 1 0 0 1 1 1 0 Putative Competence protein ComGF Adeno_E3_CR2 PF02439.15 NODE_51807_length_348_cov_2.974441_g43892_i0forward_frame_1 - 0.11 12.2 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 cobW PF02492.19 NODE_51802_length_348_cov_3.479233_g43887_i0forward_frame_1 - 5.7e-07 29.3 0.0 6.7e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain SHMT PF00464.19 NODE_51799_length_348_cov_3.945687_g43884_i0reverse_frame_1 - 2.2e-17 62.7 0.0 2.7e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase MCD PF05292.11 NODE_51799_length_348_cov_3.945687_g43884_i0reverse_frame_1 - 0.14 11.7 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase C-terminal domain TruD PF01142.18 NODE_51798_length_348_cov_4.364217_g43883_i0forward_frame_1 - 3.2e-11 42.7 0.0 3.7e-11 42.5 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) DUF1566 PF07603.11 NODE_51798_length_348_cov_4.364217_g43883_i0forward_frame_1 - 0.068 13.5 0.1 0.083 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1566) DUF4926 PF16277.5 NODE_51797_length_348_cov_4.424920_g43882_i0reverse_frame_1 - 0.13 11.7 0.1 0.31 10.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4926) Fmp27_WPPW PF10359.9 NODE_51794_length_348_cov_45.348243_g43879_i0reverse_frame_1 - 0.007 15.3 1.6 0.0072 15.2 1.6 1.1 1 0 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain SHE3 PF17078.5 NODE_51794_length_348_cov_45.348243_g43879_i0reverse_frame_1 - 0.024 14.4 3.2 0.029 14.1 3.2 1.1 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 SOGA PF11365.8 NODE_51794_length_348_cov_45.348243_g43879_i0reverse_frame_1 - 0.029 15.5 1.4 0.041 15.0 1.4 1.4 1 0 0 1 1 1 0 Protein SOGA CNP1 PF08750.11 NODE_51791_length_348_cov_53.792332_g43292_i1reverse_frame_1 - 0.087 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 CNP1-like family DUF2198 PF09964.9 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_1 - 0.019 15.0 0.6 0.035 14.2 0.6 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2198) zf-CCCH PF00642.24 NODE_51785_length_348_cov_75.936102_g43871_i0reverse_frame_1 - 2.1e-11 43.4 9.9 2.8e-05 23.9 0.4 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_51785_length_348_cov_75.936102_g43871_i0reverse_frame_1 - 1.6e-05 24.8 13.3 4.9e-05 23.2 4.0 3.4 3 0 0 3 3 3 1 Zinc finger domain zf-CCCH_2 PF14608.6 NODE_51785_length_348_cov_75.936102_g43871_i0reverse_frame_1 - 0.00015 22.1 7.0 0.048 14.2 0.4 2.4 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger zf-C3H1 PF10650.9 NODE_51785_length_348_cov_75.936102_g43871_i0reverse_frame_1 - 0.0019 17.9 0.3 0.0019 17.9 0.3 2.8 3 1 0 3 3 3 1 Putative zinc-finger domain zf-CCCH_4 PF18044.1 NODE_51785_length_348_cov_75.936102_g43871_i0reverse_frame_1 - 0.0027 17.4 10.1 0.0069 16.2 3.2 3.0 3 0 0 3 3 3 1 CCCH-type zinc finger Torus PF16131.5 NODE_51785_length_348_cov_75.936102_g43871_i0reverse_frame_1 - 0.14 12.9 7.0 0.36 11.6 2.1 2.2 1 1 1 2 2 2 0 Torus domain Cadherin_tail PF15974.5 NODE_51772_length_348_cov_117.610224_g43858_i0reverse_frame_1 - 0.99 9.7 5.1 1.4 9.3 5.1 1.2 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks200.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks200.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks200.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks200.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4387 PF14330.6 NODE_51756_length_349_cov_1.216561_g43842_i0reverse_frame_3 - 0.076 13.7 0.1 0.15 12.8 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4387) FlgH PF02107.16 NODE_51751_length_349_cov_1.665605_g43837_i0reverse_frame_2 - 0.081 12.5 0.3 0.11 12.1 0.3 1.2 1 0 0 1 1 1 0 Flagellar L-ring protein HCV_NS4b PF01001.19 NODE_51748_length_349_cov_1.789809_g43834_i0forward_frame_3 - 0.015 14.9 0.6 0.02 14.5 0.6 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS4b DUF218 PF02698.17 NODE_51745_length_349_cov_1.949045_g43831_i0forward_frame_2 - 0.044 13.8 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 DUF218 domain DUF4131 PF13567.6 NODE_51745_length_349_cov_1.949045_g43831_i0forward_frame_2 - 1.9 8.1 5.4 2.7 7.6 4.6 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) Geminin PF07412.12 NODE_51744_length_349_cov_2.028662_g43830_i0reverse_frame_3 - 0.02 14.6 2.4 0.025 14.3 2.4 1.1 1 0 0 1 1 1 0 Geminin TelA PF05816.11 NODE_51744_length_349_cov_2.028662_g43830_i0reverse_frame_3 - 0.042 12.9 1.7 0.048 12.7 1.7 1.1 1 0 0 1 1 1 0 Toxic anion resistance protein (TelA) Mal_decarbox_Al PF16957.5 NODE_51744_length_349_cov_2.028662_g43830_i0forward_frame_3 - 0.22 9.8 0.1 0.27 9.5 0.1 1.0 1 0 0 1 1 1 0 Malonate decarboxylase, alpha subunit, transporter betaPIX_CC PF16523.5 NODE_51742_length_349_cov_2.085987_g43828_i0forward_frame_3 - 7.9 6.4 10.3 0.56 10.1 1.5 2.6 1 1 2 3 3 3 0 betaPIX coiled coil Csm1_N PF18504.1 NODE_51742_length_349_cov_2.085987_g43828_i0forward_frame_2 - 2.8 8.3 7.9 1.6 9.2 1.2 2.2 2 0 0 2 2 2 0 Csm1 N-terminal domain V_ATPase_I PF01496.19 NODE_51742_length_349_cov_2.085987_g43828_i0forward_frame_2 - 3.3 5.5 5.2 3.6 5.4 5.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF465 PF04325.13 NODE_51739_length_349_cov_2.156051_g43825_i0forward_frame_2 - 1.9e-14 53.4 3.1 2.3e-13 50.0 1.2 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF465) DUF4223 PF13978.6 NODE_51738_length_349_cov_2.242038_g43824_i0reverse_frame_2 - 7e-35 118.8 0.9 1e-34 118.2 0.9 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4223) CMD PF02627.20 NODE_51738_length_349_cov_2.242038_g43824_i0forward_frame_2 - 0.1 12.6 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Carboxymuconolactone decarboxylase family UPF0014 PF03649.13 NODE_51737_length_349_cov_2.251592_g43823_i0forward_frame_2 - 0.056 12.8 0.4 0.062 12.6 0.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0014) SYCE1 PF15233.6 NODE_51733_length_349_cov_2.484076_g43819_i0reverse_frame_2 - 0.11 12.6 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Synaptonemal complex central element protein 1 Arrestin_C PF02752.22 NODE_51730_length_349_cov_2.681529_g43816_i0reverse_frame_3 - 0.025 15.1 0.0 0.051 14.0 0.0 1.5 2 0 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain APOBEC4_like PF18774.1 NODE_51730_length_349_cov_2.681529_g43816_i0reverse_frame_2 - 0.011 15.6 1.3 0.013 15.5 1.3 1.2 1 0 0 1 1 1 0 APOBEC4-like -AID/APOBEC-deaminase NAGLU PF05089.12 NODE_51730_length_349_cov_2.681529_g43816_i0reverse_frame_2 - 0.014 14.4 0.4 0.017 14.1 0.4 1.1 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain DUF1746 PF08508.10 NODE_51727_length_349_cov_2.757962_g43813_i0reverse_frame_2 - 0.14 12.5 4.8 0.046 14.1 1.9 1.6 1 1 1 2 2 2 0 Fungal domain of unknown function (DUF1746) AF-4 PF05110.13 NODE_51727_length_349_cov_2.757962_g43813_i0forward_frame_3 - 0.0084 14.3 0.8 0.0073 14.5 0.8 1.0 1 0 0 1 1 1 1 AF-4 proto-oncoprotein ATP-synt_E PF05680.12 NODE_51727_length_349_cov_2.757962_g43813_i0forward_frame_3 - 0.14 12.5 0.5 0.22 11.9 0.5 1.3 1 0 0 1 1 1 0 ATP synthase E chain APP_N PF02177.16 NODE_51723_length_349_cov_3.535032_g43809_i0reverse_frame_2 - 0.051 13.9 0.0 0.075 13.4 0.0 1.3 1 0 0 1 1 1 0 Amyloid A4 N-terminal heparin-binding Porphobil_deam PF01379.20 NODE_51720_length_349_cov_4.095541_g43806_i0reverse_frame_2 - 0.11 12.0 0.1 0.15 11.6 0.1 1.1 1 0 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain Beta-TrCP_D PF12125.8 NODE_51720_length_349_cov_4.095541_g43806_i0reverse_frame_2 - 0.25 11.3 0.2 0.25 11.3 0.2 1.7 2 0 0 2 2 2 0 D domain of beta-TrCP Ribosomal_L7Ae PF01248.26 NODE_51713_length_349_cov_22.187898_g43799_i0forward_frame_3 - 7.1e-14 51.3 0.2 1.1e-13 50.7 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RPA_interact_C PF14768.6 NODE_51713_length_349_cov_22.187898_g43799_i0forward_frame_3 - 0.0035 17.9 0.8 0.0035 17.9 0.8 1.5 2 0 0 2 2 2 1 Replication protein A interacting C-terminal CHORD PF04968.12 NODE_51712_length_349_cov_33.455414_g43798_i0reverse_frame_2 - 2.9e-06 27.9 2.9 4.7e-06 27.2 2.9 1.3 1 0 0 1 1 1 1 CHORD TssN PF17555.2 NODE_51711_length_349_cov_36.251592_g43797_i0forward_frame_3 - 0.0029 17.1 5.2 0.0039 16.6 5.2 1.1 1 0 0 1 1 1 1 Type VI secretion system, TssN KleE PF17394.2 NODE_51710_length_349_cov_36.856688_g43796_i0reverse_frame_3 - 9.7 6.5 8.2 2.9 8.2 5.0 1.7 1 1 1 2 2 2 0 Uncharacterized KleE stable inheritance protein RNA_polI_A34 PF08208.11 NODE_51707_length_349_cov_63.114650_g43793_i0forward_frame_3 - 0.26 11.4 16.5 0.33 11.0 16.5 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 TMEM43 PF07787.12 NODE_51702_length_349_cov_70.050955_g43788_i0reverse_frame_3 - 3.9 6.8 6.1 5.6 6.3 6.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 ZZ PF00569.17 NODE_51702_length_349_cov_70.050955_g43788_i0forward_frame_3 - 0.043 13.6 4.3 0.085 12.7 4.3 1.5 1 0 0 1 1 1 0 Zinc finger, ZZ type Ribosomal_S6e PF01092.19 NODE_51702_length_349_cov_70.050955_g43788_i0forward_frame_3 - 0.085 12.8 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S6e zf-B_box PF00643.24 NODE_51702_length_349_cov_70.050955_g43788_i0forward_frame_3 - 0.19 11.9 8.6 0.34 11.1 8.6 1.3 1 0 0 1 1 1 0 B-box zinc finger IKKbetaNEMObind PF12179.8 NODE_51700_length_349_cov_72.837580_g43786_i0forward_frame_3 - 0.12 12.4 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 I-kappa-kinase-beta NEMO binding domain DUF913 PF06025.12 NODE_51697_length_349_cov_77.901274_g43783_i0forward_frame_3 - 0.025 13.6 0.1 0.027 13.4 0.1 1.2 1 1 0 1 1 1 0 Domain of Unknown Function (DUF913) RESP18 PF14948.6 NODE_51696_length_349_cov_79.875796_g43782_i0reverse_frame_3 - 0.052 13.9 0.1 0.18 12.2 0.0 1.8 2 0 0 2 2 2 0 RESP18 domain gpUL132 PF11359.8 NODE_51692_length_349_cov_90.353503_g43778_i0forward_frame_3 - 0.087 12.4 0.1 0.1 12.2 0.1 1.3 1 0 0 1 1 1 0 Glycoprotein UL132 ATP-synt_8 PF00895.20 NODE_51691_length_349_cov_90.538217_g43777_i0reverse_frame_3 - 8.3 7.0 8.0 24 5.5 3.0 2.5 2 1 1 3 3 3 0 ATP synthase protein 8 TssN PF17555.2 NODE_51689_length_349_cov_97.404459_g43775_i0forward_frame_2 - 0.062 12.7 4.8 0.07 12.5 4.8 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssN Nitr_red_bet_C PF14711.6 NODE_51681_length_349_cov_119.210191_g43767_i0reverse_frame_2 - 0.08 12.6 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Respiratory nitrate reductase beta C-terminal L71 PF02448.15 NODE_51676_length_349_cov_185.082803_g43762_i0reverse_frame_2 - 0.049 14.0 0.8 0.36 11.3 0.0 2.0 1 1 1 2 2 2 0 L71 family Defensin_int PF17858.1 NODE_51672_length_349_cov_275.092357_g43758_i0reverse_frame_3 - 3 7.9 8.8 0.49 10.4 4.6 1.8 2 0 0 2 2 2 0 Platypus intermediate defensin-like peptide PEP-utilizers PF00391.23 NODE_51672_length_349_cov_275.092357_g43758_i0forward_frame_3 - 0.2 11.4 0.2 0.31 10.8 0.2 1.3 1 0 0 1 1 1 0 PEP-utilising enzyme, mobile domain Eapp_C PF10238.9 NODE_51671_length_349_cov_283.085987_g43757_i0reverse_frame_2 - 0.0012 18.9 0.4 0.0015 18.6 0.4 1.1 1 0 0 1 1 1 1 E2F-associated phosphoprotein NMO PF03060.15 NODE_51667_length_349_cov_390.563694_g43753_i0forward_frame_3 - 0.19 11.1 0.1 0.25 10.7 0.1 1.1 1 0 0 1 1 1 0 Nitronate monooxygenase SIT PF15330.6 NODE_51662_length_349_cov_14428.178344_g43748_i0forward_frame_2 - 0.0097 16.3 0.1 0.02 15.3 0.0 1.5 2 0 0 2 2 2 1 SHP2-interacting transmembrane adaptor protein, SIT MORN PF02493.20 NODE_51661_length_350_cov_1.241270_g43747_i0reverse_frame_3 - 0.48 10.4 7.2 0.79 9.7 0.3 3.6 3 0 0 3 3 3 0 MORN repeat ADD_ATRX PF17981.1 NODE_51661_length_350_cov_1.241270_g43747_i0forward_frame_3 - 0.3 11.0 0.4 0.3 11.0 0.4 1.9 2 0 0 2 2 2 0 Cysteine Rich ADD domain Abhydrolase_9_N PF15420.6 NODE_51658_length_350_cov_1.377778_g43744_i0forward_frame_3 - 0.019 15.0 0.1 0.021 14.8 0.1 1.1 1 0 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus PhaP_Bmeg PF09602.10 NODE_51657_length_350_cov_1.498413_g43743_i0reverse_frame_2 - 0.093 12.7 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) AAA PF00004.29 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 8.1e-11 42.5 0.0 9.5e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 5.8e-06 26.8 0.1 0.0019 18.6 0.0 2.1 1 1 1 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 2.1e-05 24.8 0.2 0.011 16.0 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_11 PF13086.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 2.5e-05 24.2 0.1 3.8e-05 23.6 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_3 PF07726.11 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 5.6e-05 23.0 0.0 6.9e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 9.4e-05 22.5 0.0 0.00012 22.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.00022 21.0 0.0 0.00039 20.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain DNA_pol3_delta2 PF13177.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.00033 20.5 0.1 0.00056 19.7 0.1 1.4 1 1 0 1 1 1 1 DNA polymerase III, delta subunit AAA_19 PF13245.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.00046 20.6 0.2 0.0029 18.0 0.2 1.9 1 1 0 1 1 1 1 AAA domain PhoH PF02562.16 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.00048 19.6 0.1 0.21 11.0 0.0 2.2 2 0 0 2 2 2 2 PhoH-like protein AAA_5 PF07728.14 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.00087 19.3 0.0 0.0018 18.3 0.0 1.5 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.0025 17.6 0.0 0.0029 17.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.0028 17.2 0.0 0.0034 16.9 0.0 1.2 1 1 0 1 1 1 1 P-loop containing dynein motor region Viral_helicase1 PF01443.18 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.01 15.6 0.0 0.013 15.2 0.0 1.1 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase RNA_helicase PF00910.22 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.018 15.4 0.0 0.044 14.2 0.0 1.7 1 1 0 1 1 1 0 RNA helicase Mg_chelatase PF01078.21 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.027 13.9 0.0 0.75 9.1 0.0 2.0 1 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.027 14.7 0.0 0.041 14.1 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.027 14.1 0.0 0.035 13.7 0.0 1.4 1 1 0 1 1 1 0 AAA domain Dynamin_M PF01031.20 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.027 13.7 0.0 0.031 13.5 0.0 1.0 1 0 0 1 1 1 0 Dynamin central region AAA_6 PF12774.7 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.028 13.4 0.0 0.044 12.7 0.0 1.5 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region RuvB_N PF05496.12 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.03 14.1 0.1 0.076 12.8 0.1 1.9 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.035 14.6 0.3 0.068 13.7 0.3 1.5 1 1 0 1 1 1 0 AAA domain DEAD PF00270.29 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.039 13.7 0.3 0.74 9.6 0.1 2.0 1 1 1 2 2 2 0 DEAD/DEAH box helicase IstB_IS21 PF01695.17 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.074 12.8 0.0 0.14 11.9 0.0 1.4 1 1 0 1 1 1 0 IstB-like ATP binding protein MeaB PF03308.16 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.075 12.0 0.1 0.35 9.8 0.0 1.9 1 1 1 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF2075 PF09848.9 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.082 12.1 0.8 1.7 7.8 0.8 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ABC_tran PF00005.27 NODE_51657_length_350_cov_1.498413_g43743_i0forward_frame_2 - 0.089 13.3 0.1 0.17 12.4 0.1 1.6 1 1 0 1 1 1 0 ABC transporter TetR_N PF00440.23 NODE_51651_length_350_cov_1.790476_g43737_i0forward_frame_2 - 1.5e-18 66.3 0.0 2.3e-18 65.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family UPF0122 PF04297.14 NODE_51651_length_350_cov_1.790476_g43737_i0forward_frame_2 - 0.1 12.8 0.0 0.15 12.3 0.0 1.5 1 1 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like DUF2694 PF10904.8 NODE_51649_length_350_cov_1.863492_g43735_i0reverse_frame_2 - 0.14 12.3 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2694) Fucokinase PF07959.12 NODE_51648_length_350_cov_1.987302_g43734_i0reverse_frame_3 - 0.096 11.6 0.1 0.1 11.5 0.1 1.1 1 0 0 1 1 1 0 L-fucokinase IQ PF00612.27 NODE_51648_length_350_cov_1.987302_g43734_i0reverse_frame_2 - 7.4e-11 40.9 20.7 0.00044 19.8 1.0 4.4 4 0 0 4 4 4 4 IQ calmodulin-binding motif Nitrate_red_del PF02613.15 NODE_51647_length_350_cov_2.019048_g43733_i0reverse_frame_2 - 1.2e-15 57.7 0.3 1.7e-15 57.3 0.3 1.2 1 0 0 1 1 1 1 Nitrate reductase delta subunit SirA PF10747.9 NODE_51645_length_350_cov_2.063492_g43731_i0reverse_frame_3 - 0.033 14.5 2.0 0.038 14.3 2.0 1.1 1 0 0 1 1 1 0 Sporulation inhibitor of replication protein SirA Kazal_3 PF18434.1 NODE_51641_length_350_cov_2.311111_g43727_i0forward_frame_3 - 0.01 15.6 0.4 0.018 14.8 0.4 1.4 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain Glyco_transf_8 PF01501.20 NODE_51640_length_350_cov_2.330159_g43726_i0reverse_frame_2 - 1.5e-23 83.7 0.8 1.6e-23 83.6 0.8 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 8 Glyco_transf_24 PF18404.1 NODE_51640_length_350_cov_2.330159_g43726_i0reverse_frame_2 - 0.001 18.5 0.2 0.0012 18.3 0.2 1.1 1 0 0 1 1 1 1 Glucosyltransferase 24 IMS PF00817.20 NODE_51634_length_350_cov_2.758730_g43720_i0reverse_frame_3 - 5e-26 91.5 0.0 5.6e-26 91.3 0.0 1.0 1 0 0 1 1 1 1 impB/mucB/samB family RibD_C PF01872.17 NODE_51634_length_350_cov_2.758730_g43720_i0reverse_frame_3 - 0.059 13.2 0.0 0.07 13.0 0.0 1.1 1 0 0 1 1 1 0 RibD C-terminal domain DUF1836 PF08876.11 NODE_51632_length_350_cov_2.812698_g43718_i0reverse_frame_2 - 0.022 14.8 2.4 0.025 14.6 2.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1836) HHH_5 PF14520.6 NODE_51630_length_350_cov_3.082540_g43716_i0forward_frame_3 - 0.046 14.3 0.0 0.27 11.9 0.0 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain DCB PF16213.5 NODE_51626_length_350_cov_4.625397_g43712_i0reverse_frame_3 - 0.012 15.3 4.1 0.068 12.8 4.1 1.9 1 1 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 RICTOR_M PF14666.6 NODE_51626_length_350_cov_4.625397_g43712_i0reverse_frame_3 - 0.037 13.8 4.6 0.19 11.5 0.5 2.2 1 1 1 2 2 2 0 Rapamycin-insensitive companion of mTOR, middle domain YihI PF04220.12 NODE_51626_length_350_cov_4.625397_g43712_i0reverse_frame_3 - 0.12 12.1 0.1 0.18 11.6 0.1 1.2 1 0 0 1 1 1 0 Der GTPase activator (YihI) TIMELESS PF04821.14 NODE_51626_length_350_cov_4.625397_g43712_i0reverse_frame_3 - 0.33 10.2 6.4 0.53 9.5 6.4 1.3 1 1 0 1 1 1 0 Timeless protein IMPa_helical PF18642.1 NODE_51625_length_350_cov_6.139683_g43711_i0reverse_frame_2 - 0.048 14.1 0.6 0.061 13.7 0.6 1.1 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain PP2C PF00481.21 NODE_51620_length_350_cov_52.365079_g43706_i0reverse_frame_2 - 4.1e-14 52.8 0.0 4.4e-14 52.7 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 NODE_51620_length_350_cov_52.365079_g43706_i0reverse_frame_2 - 0.081 12.8 0.0 0.081 12.8 0.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) DUF1623 PF07785.11 NODE_51614_length_350_cov_62.558730_g43700_i0reverse_frame_3 - 0.099 12.8 0.3 0.17 12.0 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1623) DUF2937 PF11157.8 NODE_51609_length_350_cov_73.784127_g43695_i0reverse_frame_2 - 0.032 13.9 0.0 0.033 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) UIM PF02809.20 NODE_51607_length_350_cov_79.968254_g43693_i0reverse_frame_3 - 0.24 11.4 0.2 0.24 11.4 0.2 2.1 3 0 0 3 3 3 0 Ubiquitin interaction motif Toxin_22 PF08092.11 NODE_51607_length_350_cov_79.968254_g43693_i0forward_frame_2 - 0.0058 16.7 0.6 0.0082 16.2 0.6 1.2 1 0 0 1 1 1 1 Magi peptide toxin family TMEM189_B_dmain PF10520.9 NODE_51604_length_350_cov_99.288889_g43690_i0forward_frame_2 - 0.028 14.5 0.3 0.042 14.0 0.3 1.2 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain TrbM PF07424.11 NODE_51604_length_350_cov_99.288889_g43690_i0forward_frame_2 - 0.059 13.3 0.0 0.069 13.1 0.0 1.2 1 0 0 1 1 1 0 TrbM DUF1997 PF09366.10 NODE_51600_length_350_cov_106.260317_g43686_i0forward_frame_2 - 0.071 13.3 0.1 0.097 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1997) DUF3819 PF12842.7 NODE_51598_length_350_cov_116.015873_g43684_i0forward_frame_3 - 0.086 12.8 0.1 0.14 12.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3819) L_HMGIC_fpl PF10242.9 NODE_51594_length_350_cov_134.926984_g43680_i0reverse_frame_3 - 0.21 11.8 0.0 0.28 11.4 0.0 1.1 1 0 0 1 1 1 0 Lipoma HMGIC fusion partner-like protein FixP_N PF14715.6 NODE_51591_length_350_cov_151.504762_g43677_i0reverse_frame_3 - 0.039 13.7 0.5 0.039 13.7 0.5 2.0 2 0 0 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP RCC1_2 PF13540.6 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 6e-07 29.1 2.3 0.11 12.4 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.001 19.3 1.5 1 9.8 0.0 2.8 1 1 2 3 3 3 2 TFIIH p62 subunit, N-terminal domain FtsQ PF03799.15 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.026 15.3 0.0 1 10.2 0.0 2.2 1 1 1 2 2 2 0 Cell division protein FtsQ XRCC1_N PF01834.16 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.03 14.3 0.3 1.8 8.6 0.1 2.0 1 1 1 2 2 2 0 XRCC1 N terminal domain Lipocalin_7 PF14651.6 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.068 13.1 0.7 3 7.8 0.1 2.1 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family DUF155 PF02582.14 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.1 12.7 0.7 9.5 6.3 0.0 2.7 2 1 1 3 3 3 0 Uncharacterised ACR, YagE family COG1723 DUF1272 PF06906.11 NODE_51585_length_350_cov_238.701587_g43671_i0forward_frame_3 - 0.11 12.6 1.1 0.11 12.6 1.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1272) DUF5408 PF17402.2 NODE_51585_length_350_cov_238.701587_g43671_i0forward_frame_3 - 0.42 10.5 3.4 14 5.7 0.1 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5408) amfpi-1 PF12190.8 NODE_51583_length_350_cov_291.101587_g43669_i0forward_frame_2 - 0.31 11.7 5.2 0.13 12.9 2.8 1.7 1 1 0 1 1 1 0 Fungal protease inhibitor Prok-RING_4 PF14447.6 NODE_51583_length_350_cov_291.101587_g43669_i0forward_frame_2 - 1.2 9.0 6.6 10 6.1 2.7 3.0 2 1 0 2 2 2 0 Prokaryotic RING finger family 4 MOZART1 PF12554.8 NODE_51578_length_350_cov_1356.298413_g43665_i0reverse_frame_3 - 4.7e-20 71.1 0.2 6.5e-20 70.6 0.2 1.2 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated Peptidase_M32 PF02074.15 NODE_51578_length_350_cov_1356.298413_g43665_i0reverse_frame_3 - 0.043 12.6 0.2 0.047 12.5 0.2 1.0 1 0 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase PI3K_1B_p101 PF10486.9 NODE_51576_length_351_cov_1.268987_g43663_i0reverse_frame_2 - 0.041 11.7 1.2 0.05 11.4 1.2 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit YopH_N PF09013.10 NODE_51574_length_351_cov_1.392405_g43661_i0forward_frame_3 - 0.0055 17.0 0.1 0.0069 16.6 0.1 1.3 1 0 0 1 1 1 1 YopH, N-terminal DUF2373 PF10180.9 NODE_51574_length_351_cov_1.392405_g43661_i0forward_frame_3 - 0.019 14.8 0.8 0.037 13.9 0.1 1.8 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2373) ATP1G1_PLM_MAT8 PF02038.16 NODE_51571_length_351_cov_1.683544_g43658_i0forward_frame_3 - 0.19 11.2 1.2 0.39 10.2 1.2 1.4 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family GHL13 PF14883.6 NODE_51568_length_351_cov_1.825949_g43655_i0reverse_frame_3 - 1.1e-36 126.6 0.0 1.2e-36 126.5 0.0 1.0 1 0 0 1 1 1 1 Hypothetical glycosyl hydrolase family 13 GST_C PF00043.25 NODE_51565_length_351_cov_1.946203_g43652_i0forward_frame_3 - 9.9e-05 22.5 0.0 0.00018 21.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 NODE_51565_length_351_cov_1.946203_g43652_i0forward_frame_3 - 0.034 14.3 0.0 0.057 13.6 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 NODE_51565_length_351_cov_1.946203_g43652_i0forward_frame_3 - 0.11 12.5 0.0 0.63 10.1 0.0 2.1 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Streptin-Immun PF11083.8 NODE_51565_length_351_cov_1.946203_g43652_i0forward_frame_3 - 0.14 12.6 0.6 5.1 7.6 0.1 2.4 1 1 1 2 2 2 0 Lantibiotic streptin immunity protein DUF410 PF04190.13 NODE_51564_length_351_cov_1.958861_g43651_i0reverse_frame_3 - 3.9e-06 26.9 0.3 4.2e-06 26.8 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF410) ANAPC3 PF12895.7 NODE_51564_length_351_cov_1.958861_g43651_i0reverse_frame_3 - 0.03 14.6 0.7 0.041 14.1 0.5 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 PK PF00224.21 NODE_51564_length_351_cov_1.958861_g43651_i0reverse_frame_3 - 0.13 11.2 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 Pyruvate kinase, barrel domain Ank PF00023.30 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 4.6e-16 58.5 0.1 3.7e-07 30.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 5.4e-15 54.0 0.2 2.2e-06 27.6 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 1.9e-14 53.8 0.1 9.8e-14 51.5 0.1 2.0 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 2e-14 53.9 0.0 3.3e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 3.7e-12 46.2 0.4 3.3e-06 27.2 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Peptidase_S9_N PF02897.15 NODE_51559_length_351_cov_2.227848_g43646_i0forward_frame_2 - 4.9e-26 91.5 0.0 5.3e-26 91.4 0.0 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain PPK2 PF03976.14 NODE_51559_length_351_cov_2.227848_g43646_i0forward_frame_2 - 0.03 13.8 0.0 0.035 13.6 0.0 1.1 1 0 0 1 1 1 0 Polyphosphate kinase 2 (PPK2) Bestrophin PF01062.21 NODE_51556_length_351_cov_2.424051_g43643_i0forward_frame_3 - 5.7e-27 94.9 0.2 6.8e-27 94.6 0.2 1.0 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF5564 PF17719.1 NODE_51554_length_351_cov_2.496835_g43641_i0reverse_frame_3 - 0.2 11.8 2.5 0.32 11.1 2.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5564) NS3 PF17530.2 NODE_51553_length_351_cov_2.496835_g43640_i0forward_frame_2 - 0.04 13.5 1.0 0.043 13.4 1.0 1.1 1 0 0 1 1 1 0 Non-structural protein NS3 Peptidase_C78 PF07910.13 NODE_51551_length_351_cov_2.829114_g43638_i0reverse_frame_3 - 0.059 12.8 0.2 0.07 12.6 0.2 1.1 1 0 0 1 1 1 0 Peptidase family C78 Lamprin PF06403.11 NODE_51548_length_351_cov_2.968354_g43635_i0forward_frame_2 - 0.00099 19.1 19.5 0.0023 17.9 2.8 2.2 1 1 1 2 2 2 2 Lamprin AntA PF08346.12 NODE_51546_length_351_cov_3.034810_g43633_i0reverse_frame_3 - 0.003 18.1 0.6 0.19 12.3 0.1 2.2 2 0 0 2 2 2 2 AntA/AntB antirepressor DX PF01666.17 NODE_51545_length_351_cov_3.265823_g43632_i0reverse_frame_2 - 0.016 15.6 0.2 0.025 15.0 0.2 1.4 1 1 0 1 1 1 0 DX module DUF1540 PF07561.11 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_3 - 0.039 14.2 0.5 0.14 12.5 0.5 1.8 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1540) Dus PF01207.17 NODE_51540_length_351_cov_4.177215_g43627_i0forward_frame_2 - 6.1e-20 71.5 0.0 6.9e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) Fer2 PF00111.27 NODE_51538_length_351_cov_4.341772_g43625_i0forward_frame_2 - 0.0039 17.1 1.5 0.0076 16.2 1.5 1.5 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain DUF998 PF06197.13 NODE_51534_length_351_cov_44.977848_g43621_i0forward_frame_3 - 0.029 14.0 0.2 0.032 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF998) DUF4838 PF16126.5 NODE_51534_length_351_cov_44.977848_g43621_i0forward_frame_2 - 0.0049 16.3 3.0 0.014 14.8 0.6 1.9 1 1 0 2 2 2 2 Domain of unknown function (DUF4838) DUF1077 PF06417.12 NODE_51533_length_351_cov_47.129747_g43620_i0reverse_frame_2 - 0.18 11.8 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) DUF2179 PF10035.9 NODE_51526_length_351_cov_74.439873_g43613_i0forward_frame_3 - 0.17 11.6 0.0 0.28 11.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) Choline_transpo PF04515.12 NODE_51524_length_351_cov_78.174051_g43611_i0reverse_frame_2 - 0.0001 21.7 0.1 0.00011 21.5 0.1 1.1 1 0 0 1 1 1 1 Plasma-membrane choline transporter DUF5551 PF17705.1 NODE_51517_length_351_cov_89.392405_g43604_i0forward_frame_3 - 0.02 14.5 0.1 0.027 14.1 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5551) HXXEE PF13787.6 NODE_51511_length_351_cov_98.974684_g43598_i0reverse_frame_3 - 0.28 12.0 5.5 0.31 11.9 4.9 1.4 1 1 0 1 1 1 0 Protein of unknown function with HXXEE motif PBP3 PF18056.1 NODE_51511_length_351_cov_98.974684_g43598_i0forward_frame_3 - 0.014 15.5 0.5 0.017 15.2 0.5 1.3 1 0 0 1 1 1 0 Penicillin Binding Protein 3 Domain Peptidase_C1 PF00112.23 NODE_51511_length_351_cov_98.974684_g43598_i0forward_frame_2 - 1.3e-21 77.7 1.0 1.6e-21 77.4 1.0 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_51511_length_351_cov_98.974684_g43598_i0forward_frame_2 - 0.0021 16.9 0.1 0.0023 16.8 0.1 1.1 1 0 0 1 1 1 1 Peptidase C1-like family ECSCR PF15820.5 NODE_51510_length_351_cov_101.313291_g43597_i0forward_frame_2 - 0.83 9.5 5.6 1.1 9.1 4.9 1.6 1 1 1 2 2 2 0 Endothelial cell-specific chemotaxis regulator DUF3399 PF11879.8 NODE_51508_length_351_cov_122.870253_g43595_i0reverse_frame_2 - 0.25 11.7 0.1 0.25 11.7 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3399) Ribosomal_L39 PF00832.20 NODE_51506_length_351_cov_134.433544_g43593_i0reverse_frame_2 - 7.2e-20 70.3 7.6 1.2e-19 69.6 7.6 1.4 1 0 0 1 1 1 1 Ribosomal L39 protein PSA_CBD PF18341.1 NODE_51506_length_351_cov_134.433544_g43593_i0reverse_frame_2 - 0.044 13.8 0.6 0.097 12.7 0.6 1.6 1 0 0 1 1 1 0 PSA endolysin C-terminal cell wall binding domain DUF1724 PF08350.10 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_3 - 0.028 14.5 0.2 37 4.6 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF1724) HCV_NS5a_1a PF08300.13 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_2 - 0.0043 17.1 0.4 0.034 14.3 0.0 2.3 2 1 1 3 3 3 1 Hepatitis C virus non-structural 5a zinc finger domain TcpQ PF10671.9 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_2 - 0.93 9.7 7.6 0.96 9.6 0.0 2.9 2 1 1 3 3 3 0 Toxin co-regulated pilus biosynthesis protein Q HXXSHH PF07586.11 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_3 - 0.02 14.5 1.4 0.91 9.0 0.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1552) Engrail_1_C_sig PF10525.9 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_3 - 0.071 12.3 0.3 51 3.2 0.0 3.1 3 0 0 3 3 3 0 Engrailed homeobox C-terminal signature domain CutA1 PF03091.15 NODE_51498_length_351_cov_425.142405_g43585_i0reverse_frame_2 - 0.00092 19.0 0.2 0.015 15.1 0.0 2.1 2 0 0 2 2 2 2 CutA1 divalent ion tolerance protein MDMPI_N PF11716.8 NODE_51498_length_351_cov_425.142405_g43585_i0forward_frame_2 - 0.29 11.8 2.2 0.33 11.6 1.2 1.6 1 1 1 2 2 2 0 Mycothiol maleylpyruvate isomerase N-terminal domain Mu-conotoxin PF05374.12 NODE_51497_length_351_cov_454.572785_g43584_i0reverse_frame_3 - 0.0059 16.6 1.0 0.0059 16.6 1.0 2.1 2 0 0 2 2 2 1 Mu-Conotoxin Mito_fiss_reg PF05308.11 NODE_51497_length_351_cov_454.572785_g43584_i0reverse_frame_2 - 5.5 7.0 5.0 6.1 6.9 5.0 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 NODE_51497_length_351_cov_454.572785_g43584_i0reverse_frame_2 - 5.8 6.3 10.3 7.5 5.9 10.3 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal zf-Tim10_DDP PF02953.15 NODE_51494_length_351_cov_1018.420886_g43431_i1reverse_frame_2 - 0.00038 20.1 2.1 0.0007 19.2 1.6 1.7 1 1 1 2 2 2 1 Tim10/DDP family zinc finger Mad3_BUB1_I_2 PF17014.5 NODE_51494_length_351_cov_1018.420886_g43431_i1reverse_frame_2 - 0.0015 18.7 2.5 0.0019 18.3 2.5 1.2 1 0 0 1 1 1 1 Putative Mad3/BUB1 like region 1 protein Keratin_assoc PF09775.9 NODE_51489_length_351_cov_61498.658228_g43577_i0reverse_frame_2 - 0.53 9.9 5.0 0.11 12.1 1.9 1.4 2 0 0 2 2 2 0 Keratinocyte-associated protein 2 SLATT_1 PF18181.1 ORF99943 - 0.0073 16.2 0.2 0.01 15.8 0.2 1.2 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain 1 Ribosomal_L34e PF01199.18 ORF98203 - 2.5e-41 139.9 7.7 3.9e-41 139.3 7.7 1.3 1 0 0 1 1 1 1 Ribosomal protein L34e DUF1428 PF07237.11 ORF98203 - 0.028 14.7 0.0 0.044 14.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1428) MORN PF02493.20 ORF97648 - 1.9e-11 43.2 17.5 3.2e-06 26.7 1.3 4.3 4 0 0 4 4 4 3 MORN repeat PapC_N PF13954.6 ORF96450 - 5.1e-21 75.2 0.0 6.2e-21 74.9 0.0 1.1 1 0 0 1 1 1 1 PapC N-terminal domain PsbY PF06298.11 ORF9643 - 7.9e-08 32.1 7.0 7.9e-08 32.1 7.0 2.4 2 0 0 2 2 2 1 Photosystem II protein Y (PsbY) Herpes_UL87 PF03043.14 ORF96415 - 0.14 10.6 0.0 0.19 10.2 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL87 family MNR PF15718.5 ORF96045 - 0.31 9.1 0.8 0.33 9.0 0.8 1.0 1 0 0 1 1 1 0 Protein moonraker AP2 PF00847.20 ORF95448 - 0.00074 19.7 0.3 0.00074 19.7 0.3 2.0 2 1 0 2 2 2 1 AP2 domain Orthopox_B11R PF07033.11 ORF95253 - 0.054 13.3 1.0 0.08 12.7 1.0 1.3 1 0 0 1 1 1 0 Orthopoxvirus B11R protein LEDGF PF11467.8 ORF94748 - 0.012 15.3 1.0 0.12 11.9 1.0 2.0 1 1 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) DUF676 PF05057.14 ORF94717 - 1.3e-27 96.7 0.1 1.4e-27 96.6 0.1 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF94717 - 3.6e-06 27.0 0.0 3.8e-06 26.9 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase PGAP1 PF07819.13 ORF94717 - 4e-05 23.5 0.0 4.7e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 PGAP1-like protein LCAT PF02450.15 ORF94717 - 0.00033 20.0 0.1 0.00067 18.9 0.1 1.5 1 1 1 2 2 2 1 Lecithin:cholesterol acyltransferase Hydrolase_4 PF12146.8 ORF94717 - 0.0051 16.1 0.0 0.0056 16.0 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF900 PF05990.12 ORF94717 - 0.041 13.4 0.0 0.046 13.2 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) Metallophos PF00149.28 ORF93893 - 0.00018 22.1 0.0 0.0003 21.4 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase FAM176 PF14851.6 ORF93655 - 0.021 14.5 2.6 0.027 14.2 2.6 1.2 1 0 0 1 1 1 0 FAM176 family NIBRIN_BRCT_II PF16508.5 ORF93655 - 0.021 15.1 1.7 0.038 14.3 1.3 1.5 1 1 1 2 2 2 0 Second BRCT domain on Nijmegen syndrome breakage protein LEDGF PF11467.8 ORF93540 - 0.012 15.3 1.0 0.12 11.9 1.0 2.0 1 1 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) P_C10 PF14974.6 ORF93048 - 4.8e-05 23.4 4.9 7.5e-05 22.8 4.9 1.3 1 0 0 1 1 1 1 Protein C10 Peptidase_C58 PF03543.14 ORF92985 - 0.0025 17.6 0.0 0.003 17.3 0.0 1.1 1 0 0 1 1 1 1 Yersinia/Haemophilus virulence surface antigen FtsX PF02687.21 ORF91165 - 6.6e-13 48.9 11.7 8.2e-13 48.6 11.7 1.1 1 0 0 1 1 1 1 FtsX-like permease family MgtE PF01769.16 ORF91165 - 0.026 14.9 7.4 0.031 14.7 7.4 1.1 1 0 0 1 1 1 0 Divalent cation transporter Fer4_9 PF13187.6 ORF91154 - 0.04 14.1 2.8 0.047 13.9 2.8 1.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain DDE_1 PF03184.19 ORF90134 - 0.11 12.2 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease DSL PF01414.19 ORF89006 - 0.00052 20.2 0.8 0.24 11.7 0.1 2.2 2 0 0 2 2 2 2 Delta serrate ligand FKBP_C PF00254.28 ORF88556 - 2.7e-22 78.9 0.0 3.4e-22 78.6 0.0 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase KAR PF15222.6 ORF88031 - 0.0014 18.9 5.0 0.055 13.8 1.6 2.1 1 1 1 2 2 2 2 Kidney androgen-regulated LNP1 PF15419.6 ORF88031 - 0.0087 16.3 0.5 0.0088 16.3 0.5 1.1 1 0 0 1 1 1 1 Leukemia NUP98 fusion partner 1 AAA_23 PF13476.6 ORF8712 - 0.0053 17.3 8.1 0.0066 17.0 8.1 1.1 1 0 0 1 1 1 1 AAA domain TRADD_N PF09034.10 ORF8712 - 0.0095 16.0 2.3 0.012 15.6 2.3 1.2 1 0 0 1 1 1 1 TRADD, N-terminal domain PIEZO PF15917.5 ORF8712 - 0.18 11.2 4.7 0.25 10.8 4.7 1.3 1 0 0 1 1 1 0 Piezo Seryl_tRNA_N PF02403.22 ORF8712 - 0.27 11.5 15.3 0.078 13.2 10.7 1.9 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Cytochrom_B559a PF00284.20 ORF86972 - 0.12 12.2 0.1 0.2 11.5 0.1 1.3 1 0 0 1 1 1 0 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit MCPVI PF02993.14 ORF86778 - 6.3 6.6 7.0 8.1 6.2 7.0 1.2 1 0 0 1 1 1 0 Minor capsid protein VI JmjC PF02373.22 ORF86432 - 1.7e-10 41.3 0.6 2.5e-10 40.8 0.6 1.3 1 0 0 1 1 1 1 JmjC domain, hydroxylase Peptidase_M1 PF01433.20 ORF85688 - 0.064 12.8 0.7 0.068 12.7 0.7 1.1 1 0 0 1 1 1 0 Peptidase family M1 domain Hrs_helical PF12210.8 ORF85688 - 0.64 10.6 5.7 0.35 11.4 2.9 1.8 2 0 0 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate LMBR1 PF04791.16 ORF85688 - 0.76 8.6 2.3 0.88 8.4 2.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein CBM_19 PF03427.13 ORF85466 - 2.2 8.3 4.4 0.58 10.2 0.5 2.0 2 0 0 2 2 2 0 Carbohydrate binding domain (family 19) 120_Rick_ant PF12574.8 ORF85266 - 0.0078 15.4 0.1 0.01 15.1 0.1 1.2 1 0 0 1 1 1 1 120 KDa Rickettsia surface antigen DIRP PF06584.13 ORF85266 - 0.075 13.2 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 DIRP P_C10 PF14974.6 ORF84731 - 4.8e-05 23.4 4.9 7.5e-05 22.8 4.9 1.3 1 0 0 1 1 1 1 Protein C10 Herpes_UL6 PF01763.16 ORF84184 - 0.014 14.0 1.3 0.015 13.8 1.3 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like CNOT1_CAF1_bind PF16415.5 ORF84184 - 0.02 14.3 0.8 0.025 14.0 0.8 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 CAF1-binding domain RSRP PF17069.5 ORF84184 - 0.2 11.2 1.1 0.22 11.0 1.1 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 MCPVI PF02993.14 ORF82217 - 6.3 6.6 7.0 8.1 6.2 7.0 1.2 1 0 0 1 1 1 0 Minor capsid protein VI DUF1859 PF08948.10 ORF79874 - 0.0017 18.3 0.1 0.0022 17.9 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1859) Hydrolase_4 PF12146.8 ORF79874 - 0.0039 16.5 0.0 0.0058 15.9 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF79874 - 0.059 13.5 0.0 0.064 13.4 0.0 1.1 1 0 0 1 1 1 0 TAP-like protein LIP PF03583.14 ORF79874 - 0.061 12.6 0.0 0.072 12.4 0.0 1.1 1 0 0 1 1 1 0 Secretory lipase ABC_tran PF00005.27 ORF7987 - 1.8e-07 31.7 0.0 3.5e-07 30.8 0.0 1.4 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF7987 - 0.025 14.4 0.0 0.032 14.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks201.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks201.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks201.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks201.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:00:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Vma12 PF11712.8 ORF7939 - 0.67 10.0 4.3 1.7 8.7 0.3 2.0 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Copine PF07002.16 ORF78512 - 1.1e-34 119.8 0.2 1.2e-34 119.7 0.2 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF78512 - 3.8e-05 23.9 0.0 4.3e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 vWA found in TerF C terminus nec1 PF10379.9 ORF78280 - 0.022 14.2 0.3 0.048 13.2 0.3 1.6 1 1 0 1 1 1 0 Virulence protein nec1 WD40 PF00400.32 ORF77686 - 1.7e-07 31.8 0.6 4.5e-05 24.1 0.3 2.5 1 1 1 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF77686 - 1.8e-07 31.3 0.0 1.9e-05 24.8 0.0 1.9 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Scaffolding_pro PF11418.8 ORF77187 - 0.11 13.0 0.0 0.18 12.4 0.0 1.2 1 0 0 1 1 1 0 Phi29 scaffolding protein PLL PF18587.1 ORF76668 - 0.085 13.0 0.7 0.13 12.4 0.7 1.3 1 0 0 1 1 1 0 PTX/LNS-Like (PLL) domain zf-U1 PF06220.12 ORF75822 - 0.011 15.5 5.5 0.012 15.3 1.6 2.4 2 0 0 2 2 2 0 U1 zinc finger Cm_res_leader PF08077.11 ORF75741 - 0.0019 18.0 1.9 2 8.8 0.1 2.5 2 0 0 2 2 2 2 Chloramphenicol resistance gene leader peptide P33MONOX PF15302.6 ORF75319 - 0.16 11.7 0.5 0.18 11.5 0.5 1.1 1 0 0 1 1 1 0 P33 mono-oxygenase P2_N PF18628.1 ORF73922 - 0.037 13.8 0.8 0.051 13.3 0.5 1.3 1 1 0 1 1 1 0 Viral coat protein P2 N-terminal domain LMBR1 PF04791.16 ORF73922 - 0.13 11.2 1.4 0.13 11.1 1.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein UBA_3 PF09288.10 ORF73922 - 1 9.2 4.4 0.36 10.7 1.1 1.9 2 0 0 2 2 2 0 Fungal ubiquitin-associated domain DDDD PF10161.9 ORF73129 - 0.3 10.9 3.3 2.9 7.7 0.4 2.2 2 0 0 2 2 2 0 Putative mitochondrial precursor protein SF-assemblin PF06705.11 ORF72047 - 0.063 12.6 0.1 0.082 12.2 0.1 1.1 1 0 0 1 1 1 0 SF-assemblin/beta giardin Strabismus PF06638.11 ORF71228 - 5.9 5.4 6.4 2.9 6.4 2.6 1.8 1 1 1 2 2 2 0 Strabismus protein Pkinase PF00069.25 ORF71223 - 2.5e-11 43.4 0.0 2.5e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Metallophos PF00149.28 ORF71090 - 0.00018 22.1 0.0 0.0003 21.4 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase AAA_21 PF13304.6 ORF70807 - 4.1e-08 33.4 0.0 6.4e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF70807 - 0.00011 22.8 0.3 0.0024 18.4 0.0 2.0 2 0 0 2 2 2 1 ABC transporter KdpD PF02702.17 ORF70807 - 0.022 14.3 0.1 0.074 12.5 0.0 1.7 1 1 1 2 2 2 0 Osmosensitive K+ channel His kinase sensor domain SbcCD_C PF13558.6 ORF70807 - 0.14 12.4 0.0 0.65 10.3 0.0 1.9 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF70807 - 0.14 11.6 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain ScdA_N PF04405.14 ORF70039 - 0.069 12.8 0.2 0.19 11.4 0.2 1.7 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) EF-hand_7 PF13499.6 ORF69231 - 1.7e-09 38.0 5.3 1.5e-06 28.5 0.7 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF69231 - 2.4e-07 30.1 3.0 0.0044 16.9 0.0 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF69231 - 2.9e-07 29.6 7.1 0.013 15.0 0.7 3.5 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF69231 - 0.014 15.2 2.9 0.13 12.2 0.7 2.4 2 1 0 2 2 2 0 EF-hand domain pair Pro_CA PF00484.19 ORF68807 - 2.9e-13 50.4 0.0 3.3e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Carbonic anhydrase H_kinase_N PF12282.8 ORF68807 - 0.043 13.8 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 Signal transduction histidine kinase DUF2626 PF11117.8 ORF68798 - 0.01 16.6 1.5 0.015 16.0 1.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2626) Bap31 PF05529.12 ORF68656 - 0.034 14.0 0.5 0.04 13.8 0.5 1.2 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region DUF247 PF03140.15 ORF65415 - 0.14 11.3 1.0 0.24 10.6 0.1 1.6 1 1 1 2 2 2 0 Plant protein of unknown function Kelch_6 PF13964.6 ORF64953 - 2.1e-06 27.8 0.0 0.0022 18.2 0.0 2.1 1 1 1 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF64953 - 1e-05 25.0 0.0 0.18 11.4 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 ORF64953 - 0.1 12.9 0.0 3.2 8.1 0.0 2.2 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF64953 - 0.14 12.1 0.3 6.1 6.9 0.1 2.2 2 0 0 2 2 2 0 Kelch motif Telomere_Sde2_2 PF13297.6 ORF64621 - 0.0074 15.9 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Telomere stability C-terminal FtsX PF02687.21 ORF64347 - 6.6e-13 48.9 11.7 8.2e-13 48.6 11.7 1.1 1 0 0 1 1 1 1 FtsX-like permease family MgtE PF01769.16 ORF64347 - 0.026 14.9 7.4 0.031 14.7 7.4 1.1 1 0 0 1 1 1 0 Divalent cation transporter FTO_CTD PF12934.7 ORF64309 - 0.0065 16.2 0.1 0.0086 15.8 0.1 1.2 1 1 0 1 1 1 1 FTO C-terminal domain TRIF-NTD PF17798.1 ORF6424 - 0.19 11.8 0.0 0.23 11.6 0.0 1.1 1 0 0 1 1 1 0 TRIF N-terminal domain V-SNARE_C PF12352.8 ORF64201 - 0.00018 21.7 2.9 0.00034 20.8 2.9 1.4 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 ORF64201 - 0.079 12.9 0.3 0.079 12.9 0.3 2.0 1 1 1 2 2 2 0 Sec20 GcpE PF04551.14 ORF64201 - 0.087 11.9 1.5 0.11 11.6 1.5 1.0 1 0 0 1 1 1 0 GcpE protein Pkinase PF00069.25 ORF6381 - 8.7e-17 61.3 0.0 1.1e-16 61.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6381 - 2e-08 33.8 0.0 2.4e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF6381 - 0.0025 17.2 0.0 0.0031 16.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pox_P21 PF05313.12 ORF63393 - 0.017 14.7 13.0 0.02 14.5 13.0 1.1 1 0 0 1 1 1 0 Poxvirus P21 membrane protein PP2C PF00481.21 ORF6246 - 8e-07 28.9 0.1 8.8e-07 28.8 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF6246 - 0.013 15.1 0.5 0.014 15.0 0.5 1.1 1 0 0 1 1 1 0 Protein phosphatase 2C PDEase_I PF00233.19 ORF62097 - 0.00012 21.9 0.1 0.0003 20.6 0.0 1.6 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase NP1-WLL PF11733.8 ORF61614 - 0.058 13.2 4.2 0.066 13.0 4.2 1.0 1 0 0 1 1 1 0 Non-capsid protein NP1 EF-hand_1 PF00036.32 ORF61212 - 6e-21 72.4 7.9 2.6e-07 29.7 0.6 3.3 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF61212 - 1.2e-18 67.3 3.6 4.1e-13 49.6 0.4 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF61212 - 1.3e-16 60.2 7.8 3.6e-10 39.5 0.1 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF61212 - 1.1e-14 53.0 6.5 6e-05 22.7 0.1 3.7 3 1 1 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 ORF61212 - 4.1e-09 35.5 9.6 0.00051 19.4 0.5 3.7 3 1 0 3 3 3 3 EF hand EF-hand_9 PF14658.6 ORF61212 - 1.2e-07 31.9 0.3 4.1e-06 27.0 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain AAA_assoc_C PF09821.9 ORF61212 - 0.014 15.9 0.1 0.13 12.7 0.1 2.0 2 0 0 2 2 2 0 C-terminal AAA-associated domain DUF3008 PF11450.8 ORF61212 - 0.031 14.4 0.0 0.031 14.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknwon function (DUF3008) LETM1 PF07766.13 ORF61212 - 0.038 13.3 0.2 0.061 12.7 0.2 1.4 1 1 0 1 1 1 0 LETM1-like protein SUB1_ProdP9 PF18213.1 ORF61212 - 0.044 13.6 0.3 0.11 12.4 0.1 1.7 1 1 0 2 2 2 0 SUB1 protease Prodomain ProdP9 DUF853 PF05872.12 ORF61212 - 0.057 12.0 0.0 0.065 11.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) FlgD PF03963.14 ORF61212 - 0.066 13.5 0.3 1.3 9.4 0.1 2.2 2 0 0 2 2 2 0 Flagellar hook capping protein - N-terminal region Myb_DNA-binding PF00249.31 ORF61195 - 2.3e-08 34.1 1.0 4.1e-08 33.3 1.0 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF61195 - 0.014 15.6 1.2 0.035 14.4 1.2 1.7 1 0 0 1 1 1 0 Myb-like DNA-binding domain CBF_beta PF02312.17 ORF61195 - 0.024 14.3 0.2 0.034 13.8 0.2 1.2 1 0 0 1 1 1 0 Core binding factor beta subunit Myb_DNA-bind_7 PF15963.5 ORF61195 - 0.037 13.9 1.2 0.058 13.3 0.1 1.9 3 0 0 3 3 3 0 Myb DNA-binding like Ntox27 PF15531.6 ORF61195 - 0.078 12.9 0.1 0.11 12.4 0.1 1.3 1 1 0 1 1 1 0 Bacterial toxin 27 FtsX PF02687.21 ORF61174 - 6.6e-13 48.9 11.7 8.2e-13 48.6 11.7 1.1 1 0 0 1 1 1 1 FtsX-like permease family MgtE PF01769.16 ORF61174 - 0.026 14.9 7.4 0.031 14.7 7.4 1.1 1 0 0 1 1 1 0 Divalent cation transporter BTB_2 PF02214.22 ORF60596 - 0.08 13.3 0.3 0.12 12.8 0.3 1.2 1 0 0 1 1 1 0 BTB/POZ domain DUF5024 PF16427.5 ORF58954 - 0.032 14.5 0.6 0.044 14.1 0.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5024) Flu_B_M2 PF04772.12 ORF58954 - 0.11 12.8 1.2 0.14 12.4 0.8 1.4 1 1 0 1 1 1 0 Influenza B matrix protein 2 (BM2) Rad60-SLD PF11976.8 ORF58537 - 1.7e-06 27.7 0.1 2.2e-06 27.4 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 ORF58537 - 6.6e-06 25.8 0.0 8.3e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family DUF3319 PF11782.8 ORF58422 - 0.024 14.6 0.1 0.044 13.8 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3319) DUF4266 PF14086.6 ORF56896 - 0.88 10.6 3.3 1.1 10.3 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4266) YL1 PF05764.13 ORF56896 - 1.4 9.0 11.5 1.6 8.8 11.5 1.0 1 0 0 1 1 1 0 YL1 nuclear protein FAM220 PF15487.6 ORF56896 - 9.3 5.8 13.5 11 5.6 13.5 1.0 1 0 0 1 1 1 0 FAM220 family EF-hand_7 PF13499.6 ORF56696 - 5.6e-05 23.5 4.5 0.00011 22.6 4.5 1.5 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF56696 - 0.00046 19.9 3.6 0.0011 18.7 0.8 2.7 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF56696 - 0.016 14.8 7.1 0.036 13.6 1.5 2.8 3 0 0 3 3 3 0 EF hand EF-hand_8 PF13833.6 ORF56696 - 0.19 11.6 7.9 2.1 8.3 0.4 2.7 2 1 0 2 2 2 0 EF-hand domain pair Inhibitor_I10 PF12559.8 ORF55750 - 0.032 14.5 0.0 0.097 12.9 0.0 1.7 2 0 0 2 2 2 0 Serine endopeptidase inhibitors GTP_EFTU PF00009.27 ORF55439 - 0.036 13.6 0.1 0.043 13.3 0.1 1.0 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Gemini_AL3 PF01407.17 ORF55056 - 0.027 14.3 0.2 0.032 14.1 0.2 1.2 1 0 0 1 1 1 0 Geminivirus AL3 protein Ribosomal_L7Ae PF01248.26 ORF54674 - 1.3e-22 79.3 0.7 1.5e-22 79.1 0.7 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Antimicrobial19 PF08225.11 ORF54674 - 0.0022 17.6 0.4 2 8.1 0.1 2.4 2 0 0 2 2 2 2 Pseudin antimicrobial peptide Atypical_Card PF18461.1 ORF54674 - 0.042 14.1 0.0 0.057 13.6 0.0 1.2 1 0 0 1 1 1 0 Atypical caspase recruitment domain PPR_2 PF13041.6 ORF54674 - 0.13 12.5 0.1 2.3 8.5 0.0 2.4 2 0 0 2 2 2 0 PPR repeat family BsuBI_PstI_RE PF06616.11 ORF54674 - 0.19 11.0 0.0 0.25 10.6 0.0 1.1 1 0 0 1 1 1 0 BsuBI/PstI restriction endonuclease domain Metallophos PF00149.28 ORF5458 - 0.00018 22.1 0.0 0.0003 21.4 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase 5_nucleotid_C PF02872.18 ORF54548 - 0.031 14.5 0.0 0.053 13.7 0.0 1.3 1 0 0 1 1 1 0 5'-nucleotidase, C-terminal domain DUF3961 PF13106.6 ORF54548 - 0.16 11.6 0.5 1.8 8.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3961) Chitin_synth_2 PF03142.15 ORF54217 - 0.12 10.9 0.1 0.16 10.6 0.1 1.1 1 0 0 1 1 1 0 Chitin synthase DUF3789 PF12664.7 ORF5400 - 0.66 9.7 2.5 1.1 9.1 2.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3789) Gag_p17 PF00540.18 ORF53728 - 0.1 12.6 0.3 0.19 11.7 0.3 1.5 1 1 0 1 1 1 0 gag gene protein p17 (matrix protein) EamA PF00892.20 ORF53721 - 0.0036 17.5 2.9 0.0042 17.3 2.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family TraH PF06122.11 ORF53537 - 0.041 13.2 0.0 0.062 12.6 0.0 1.2 1 0 0 1 1 1 0 Conjugative relaxosome accessory transposon protein DUF5408 PF17402.2 ORF52937 - 0.015 15.1 1.1 0.024 14.5 1.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5408) DUF2418 PF10332.9 ORF52937 - 0.13 12.8 0.2 0.19 12.2 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) PLL PF18587.1 ORF52212 - 0.085 13.0 0.7 0.13 12.4 0.7 1.3 1 0 0 1 1 1 0 PTX/LNS-Like (PLL) domain SKA2 PF16740.5 ORF51211 - 0.063 13.1 6.5 1.6 8.5 2.6 2.1 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 Arteri_nucleo PF01481.16 ORF51211 - 0.074 13.4 2.5 0.099 13.0 2.5 1.2 1 0 0 1 1 1 0 Arterivirus nucleocapsid protein DDDD PF10161.9 ORF51094 - 0.3 10.9 3.3 2.9 7.7 0.4 2.2 2 0 0 2 2 2 0 Putative mitochondrial precursor protein CutA1 PF03091.15 ORF51006 - 0.0057 16.5 1.7 0.17 11.8 0.8 2.2 1 1 1 2 2 2 2 CutA1 divalent ion tolerance protein SUB1_ProdP9 PF18213.1 ORF50065 - 0.16 11.8 5.4 0.048 13.5 1.5 2.0 2 1 0 2 2 2 0 SUB1 protease Prodomain ProdP9 FtsX PF02687.21 ORF49407 - 6.6e-13 48.9 11.7 8.2e-13 48.6 11.7 1.1 1 0 0 1 1 1 1 FtsX-like permease family MgtE PF01769.16 ORF49407 - 0.026 14.9 7.4 0.031 14.7 7.4 1.1 1 0 0 1 1 1 0 Divalent cation transporter APC_u15 PF16636.5 ORF49347 - 0.45 11.0 1.4 15 6.1 0.1 2.4 1 1 2 3 3 3 0 Unstructured region on APC between APC_crr regions 5 and 6 BolA PF01722.18 ORF49218 - 8.6e-29 99.6 0.3 1e-28 99.4 0.3 1.1 1 0 0 1 1 1 1 BolA-like protein UPF0047 PF01894.17 ORF49218 - 0.03 14.5 0.0 0.049 13.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0047 Vps35 PF03635.17 ORF48909 - 0.3 9.5 0.5 0.36 9.3 0.5 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 35 DALR_2 PF09190.11 ORF4856 - 2e-24 85.8 3.7 1.1e-23 83.4 0.9 2.1 2 0 0 2 2 2 1 DALR domain DUF5327 PF17261.2 ORF4856 - 0.018 15.8 0.1 0.021 15.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5327) EF-1_beta_acid PF10587.9 ORF4856 - 3.6 8.1 8.5 2 8.9 1.6 2.5 2 0 0 2 2 2 0 Eukaryotic elongation factor 1 beta central acidic region RAP PF08373.10 ORF48291 - 1.7e-05 24.8 0.8 3.2e-05 23.9 0.8 1.5 1 0 0 1 1 1 1 RAP domain Pkinase PF00069.25 ORF47672 - 8.7e-17 61.3 0.0 1.1e-16 61.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF47672 - 2e-08 33.8 0.0 2.4e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF47672 - 0.0025 17.2 0.0 0.0031 16.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like zf-LITAF-like PF10601.9 ORF46355 - 0.026 14.8 0.6 0.026 14.8 0.6 1.5 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain COPI_assoc PF08507.10 ORF45893 - 3.6e-06 27.1 3.1 3.9e-06 27.0 3.1 1.1 1 0 0 1 1 1 1 COPI associated protein FA_desaturase PF00487.24 ORF45893 - 0.0084 16.0 0.2 0.0084 16.0 0.2 1.0 1 0 0 1 1 1 1 Fatty acid desaturase Bromodomain PF00439.25 ORF45316 - 1.3e-15 57.2 0.0 2.1e-15 56.6 0.0 1.3 1 0 0 1 1 1 1 Bromodomain NiFe-hyd_HybE PF11939.8 ORF45316 - 0.088 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 [NiFe]-hydrogenase assembly, chaperone, HybE CitF PF04223.12 ORF44958 - 0.073 11.9 0.0 0.08 11.8 0.0 1.1 1 0 0 1 1 1 0 Citrate lyase, alpha subunit (CitF) Pterin_4a PF01329.19 ORF43793 - 0.047 13.9 0.6 0.09 13.0 0.4 1.6 1 1 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase MAS20 PF02064.15 ORF43793 - 0.057 13.5 3.2 0.065 13.3 3.2 1.1 1 0 0 1 1 1 0 MAS20 protein import receptor JAKMIP_CC3 PF16034.5 ORF43793 - 0.18 11.7 14.8 0.45 10.4 2.1 2.1 1 1 1 2 2 2 0 JAKMIP CC3 domain Fib_alpha PF08702.10 ORF43793 - 0.26 11.5 7.9 0.28 11.3 7.9 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2098 PF09871.9 ORF43793 - 0.59 10.5 6.0 0.27 11.6 3.0 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2098) DUF3683 PF12447.8 ORF43793 - 2.3 8.4 8.1 6.9 6.8 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3683) ATP-synt_E PF05680.12 ORF43793 - 7.2 7.0 9.3 7.2 7.0 3.9 2.1 1 1 1 2 2 2 0 ATP synthase E chain Sugar_tr PF00083.24 ORF43667 - 0.0003 19.8 0.0 0.00036 19.5 0.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter Bap31 PF05529.12 ORF43181 - 0.034 14.0 0.5 0.04 13.8 0.5 1.2 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region DUF1214 PF06742.11 ORF41285 - 2.5e-15 56.9 0.1 2.9e-15 56.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1214) DM13 PF10517.9 ORF41285 - 0.11 13.1 0.0 0.17 12.5 0.0 1.3 1 0 0 1 1 1 0 Electron transfer DM13 P5CR_dimer PF14748.6 ORF40755 - 3.3e-35 120.4 0.9 3.7e-35 120.3 0.9 1.0 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation ubiquitin PF00240.23 ORF4072 - 3e-05 23.7 0.0 0.051 13.3 0.0 2.2 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD_2 PF13881.6 ORF4072 - 0.17 12.0 0.1 0.34 11.0 0.1 1.6 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like YukD PF08817.10 ORF4072 - 0.2 12.4 0.0 0.38 11.5 0.0 1.4 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD 2-oxoacid_dh PF00198.23 ORF39758 - 5.2e-41 140.6 0.0 5.6e-41 140.5 0.0 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DUF778 PF05608.12 ORF39309 - 0.053 13.9 0.5 0.058 13.8 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF778) MitMem_reg PF13012.6 ORF39042 - 0.011 16.1 0.1 0.013 15.9 0.1 1.2 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function Phage_C PF12025.8 ORF39042 - 0.05 13.5 0.1 5.7 6.9 0.0 2.4 2 0 0 2 2 2 0 Phage protein C DUF4549 PF15082.6 ORF38344 - 0.059 13.2 0.4 0.11 12.3 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4549) IFT57 PF10498.9 ORF38327 - 2.5e-19 69.5 3.7 3.1e-19 69.2 3.7 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Allexi_40kDa PF05549.11 ORF38327 - 0.0062 16.1 1.5 0.0069 15.9 1.5 1.1 1 0 0 1 1 1 1 Allexivirus 40kDa protein JIP_LZII PF16471.5 ORF38327 - 0.0075 16.4 2.5 0.047 13.9 0.2 2.5 2 1 0 2 2 2 1 JNK-interacting protein leucine zipper II Occludin_ELL PF07303.13 ORF38327 - 0.021 15.5 1.7 0.034 14.9 1.7 1.3 1 0 0 1 1 1 0 Occludin homology domain NPV_P10 PF05531.12 ORF38327 - 0.034 14.6 6.7 0.49 10.9 0.7 2.2 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Laminin_II PF06009.12 ORF38327 - 0.037 14.1 2.8 0.047 13.7 2.8 1.2 1 0 0 1 1 1 0 Laminin Domain II DUF3782 PF12644.7 ORF38327 - 0.041 14.0 0.3 0.4 10.9 0.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3782) DUF2730 PF10805.8 ORF38327 - 0.042 14.0 1.4 2.1 8.5 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Helo_like_N PF17111.5 ORF38327 - 0.062 12.7 2.1 0.075 12.4 1.9 1.3 1 1 0 1 1 1 0 Fungal N-terminal domain of STAND proteins FapA PF03961.13 ORF38327 - 0.063 11.9 5.7 0.073 11.7 5.7 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF2205 PF10224.9 ORF38327 - 0.085 12.9 3.5 0.11 12.5 1.8 1.9 1 1 1 2 2 2 0 Short coiled-coil protein SKA2 PF16740.5 ORF38327 - 0.092 12.5 3.4 0.36 10.6 3.4 2.0 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 PRKG1_interact PF15898.5 ORF38327 - 0.14 13.1 4.5 0.21 12.5 4.5 1.4 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain G10 PF01125.17 ORF38327 - 0.14 11.9 0.4 0.17 11.6 0.4 1.2 1 0 0 1 1 1 0 G10 protein PCRF PF03462.18 ORF38327 - 0.17 11.7 2.5 0.19 11.6 2.5 1.1 1 0 0 1 1 1 0 PCRF domain DUF1664 PF07889.12 ORF38327 - 0.19 11.8 4.1 0.64 10.1 4.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF38327 - 0.27 11.7 4.4 0.59 10.6 1.1 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DivIC PF04977.15 ORF38327 - 0.28 11.0 6.0 0.22 11.3 3.0 2.2 1 1 2 3 3 3 0 Septum formation initiator zf-Paramyx-P PF13008.7 ORF38255 - 0.03 13.8 1.0 0.8 9.2 0.1 2.5 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein DUF1922 PF09082.10 ORF38255 - 0.13 12.6 2.2 0.23 11.8 1.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1922) 14-3-3 PF00244.20 ORF37587 - 8.2e-37 126.9 3.2 9.1e-37 126.7 3.2 1.0 1 0 0 1 1 1 1 14-3-3 protein DUF2225 PF09986.9 ORF37587 - 0.00046 20.0 0.3 0.00055 19.7 0.3 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2225) DUF5630 PF18632.1 ORF37587 - 0.18 11.1 2.3 1.8 7.8 0.2 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5630) ApoB100_C PF12491.8 ORF37587 - 0.67 10.0 4.1 11 6.1 0.3 2.4 3 0 0 3 3 3 0 Apolipoprotein B100 C terminal DUF5633 PF18656.1 ORF37587 - 0.93 9.4 8.0 0.55 10.2 3.6 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5633) Acyl-thio_N PF12590.8 ORF37345 - 0.013 16.1 1.5 0.016 15.8 1.5 1.1 1 0 0 1 1 1 0 Acyl-ATP thioesterase CmcI PF04989.12 ORF36902 - 7.8e-24 84.5 0.0 1.7e-22 80.1 0.0 2.0 1 1 0 1 1 1 1 Cephalosporin hydroxylase Methyltransf_24 PF13578.6 ORF36902 - 0.012 16.6 0.0 0.016 16.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DUF4350 PF14258.6 ORF36902 - 0.053 14.0 0.0 0.1 13.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) TylF PF05711.11 ORF36902 - 0.15 11.4 0.0 0.17 11.1 0.0 1.1 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) MORN PF02493.20 ORF36254 - 1.9e-11 43.2 17.5 3.2e-06 26.7 1.3 4.3 4 0 0 4 4 4 3 MORN repeat Glyco_transf_7N PF13733.6 ORF34455 - 0.064 12.9 0.8 0.51 10.0 0.6 2.0 1 1 1 2 2 2 0 N-terminal region of glycosyl transferase group 7 DUF2312 PF10073.9 ORF34080 - 0.051 13.2 0.4 0.051 13.2 0.4 3.1 2 1 2 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2312) GAPT PF11770.8 ORF34080 - 0.14 12.0 3.0 0.18 11.7 3.0 1.2 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) ATP-synt_DE_N PF02823.16 ORF33766 - 0.022 14.6 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Ribul_P_3_epim PF00834.19 ORF32253 - 2.1e-31 108.9 0.5 2.3e-31 108.8 0.5 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Nefa_Nip30_N PF10187.9 ORF32245 - 0.044 14.1 8.1 0.79 10.1 2.1 2.3 2 0 0 2 2 2 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 PhyH PF05721.13 ORF3083 - 0.0015 18.8 0.0 0.0017 18.7 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) CHD5 PF04420.14 ORF30222 - 2.2e-05 24.4 4.3 3.3e-05 23.8 4.3 1.6 1 1 0 1 1 1 1 CHD5-like protein GET2 PF08690.10 ORF30222 - 0.0083 15.8 0.1 0.01 15.5 0.1 1.0 1 0 0 1 1 1 1 GET complex subunit GET2 DUF872 PF05915.12 ORF30222 - 0.072 13.3 0.0 0.098 12.8 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) UPF0239 PF06783.11 ORF30222 - 7.1 6.9 7.6 32 4.8 4.7 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0239) UbiD PF01977.16 ORF29739 - 1.2e-18 67.2 1.9 1.4e-18 67.0 1.9 1.1 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DUF3018 PF11455.8 ORF29640 - 0.023 14.6 0.2 1.2 9.2 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3018) DUF1299 PF06975.11 ORF29640 - 1.2 9.2 5.7 2.1 8.5 0.1 2.6 3 1 0 3 3 3 0 Protein of unknown function (DUF1299) HNOB PF07700.15 ORF28065 - 0.072 13.0 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 Haem-NO-binding Circo_capsid PF02443.15 ORF27224 - 0.053 13.1 19.3 0.067 12.8 19.3 1.3 1 0 0 1 1 1 0 Circovirus capsid protein Peptidase_M15_2 PF05951.13 ORF27170 - 0.069 12.8 0.9 0.089 12.5 0.9 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF882) ERGIC_N PF13850.6 ORF26861 - 0.033 14.5 0.5 0.037 14.4 0.5 1.3 1 1 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) PP2C PF00481.21 ORF26049 - 2.2e-14 53.7 0.0 2.4e-14 53.6 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF26049 - 0.0098 15.8 0.0 0.0098 15.8 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) FliO PF04347.13 ORF26049 - 0.1 12.9 0.3 17 5.8 0.0 2.3 1 1 0 2 2 2 0 Flagellar biosynthesis protein, FliO zf-LITAF-like PF10601.9 ORF24528 - 0.026 14.8 0.6 0.026 14.8 0.6 1.5 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Y_Y_Y PF07495.13 ORF22726 - 0.022 14.7 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Y_Y_Y domain TcfC PF16967.5 ORF22726 - 0.16 11.5 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 E-set like domain P_C10 PF14974.6 ORF22379 - 4.8e-05 23.4 4.9 7.5e-05 22.8 4.9 1.3 1 0 0 1 1 1 1 Protein C10 Alpha-amyl_C2 PF07821.12 ORF21776 - 0.029 14.6 0.0 0.2 11.9 0.0 2.0 1 1 0 1 1 1 0 Alpha-amylase C-terminal beta-sheet domain DUF3784 PF12650.7 ORF19741 - 0.057 13.6 0.4 0.079 13.2 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) DUF4131 PF13567.6 ORF19741 - 0.1 12.2 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF443 PF04276.12 ORF19741 - 0.15 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF443) UPF0270 PF06794.12 ORF19723 - 4.4e-16 58.7 0.0 6.1e-16 58.3 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0270) Cu_bind_like PF02298.17 ORF19723 - 0.024 14.6 0.2 0.054 13.5 0.1 1.5 2 0 0 2 2 2 0 Plastocyanin-like domain DUF5383 PF17355.2 ORF1898 - 0.17 12.3 0.2 0.23 11.8 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5383) MORN PF02493.20 ORF17546 - 2.3e-08 33.4 7.9 1e-05 25.1 0.2 3.2 3 0 0 3 3 3 2 MORN repeat Orthopox_B11R PF07033.11 ORF17495 - 0.054 13.3 1.0 0.08 12.7 1.0 1.3 1 0 0 1 1 1 0 Orthopoxvirus B11R protein Oleosin PF01277.17 ORF16422 - 0.0013 18.4 0.2 0.0016 18.2 0.2 1.2 1 0 0 1 1 1 1 Oleosin Phage_rep_org_N PF09681.10 ORF16301 - 0.00049 20.0 0.7 0.00066 19.6 0.7 1.3 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) DUF4393 PF14337.6 ORF16301 - 0.0018 18.1 1.7 0.0022 17.8 1.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4393) GrpE PF01025.19 ORF16301 - 0.041 13.6 0.6 0.052 13.2 0.6 1.1 1 0 0 1 1 1 0 GrpE ERGIC_N PF13850.6 ORF15870 - 0.0025 18.1 0.2 0.0031 17.8 0.2 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF63 PF01889.17 ORF15660 - 0.14 12.3 0.0 0.15 12.2 0.0 1.0 1 0 0 1 1 1 0 Membrane protein of unknown function DUF63 Aminotran_1_2 PF00155.21 ORF15635 - 2.7e-09 36.7 0.0 3.2e-09 36.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DUF4128 PF13554.6 ORF15635 - 0.077 13.0 0.0 1.2 9.2 0.0 2.1 1 1 1 2 2 2 0 Bacteriophage related domain of unknown function HU-HIG PF18291.1 ORF15635 - 0.13 12.4 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 HU domain fused to wHTH, Ig, or Glycine-rich motif PKcGMP_CC PF16808.5 ORF15423 - 0.14 12.0 0.3 0.24 11.3 0.3 1.4 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Glyco_trans_1_4 PF13692.6 ORF14798 - 0.077 13.4 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 Gag_p17 PF00540.18 ORF14583 - 0.1 12.6 0.3 0.19 11.7 0.3 1.5 1 1 0 1 1 1 0 gag gene protein p17 (matrix protein) FAA_hydrolase PF01557.18 ORF14522 - 9.7e-09 35.2 0.0 1.2e-08 35.0 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family PAPA-1 PF04795.12 ORF14318 - 0.062 14.1 1.1 0.077 13.8 1.1 1.5 1 1 0 1 1 1 0 PAPA-1-like conserved region SSP160 PF06933.11 ORF14317 - 0.079 11.2 0.1 0.086 11.0 0.1 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 HET PF06985.11 ORF14136 - 0.13 12.6 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Heterokaryon incompatibility protein (HET) Hydrolase_4 PF12146.8 ORF1394 - 0.025 13.8 0.0 0.041 13.1 0.0 1.4 1 1 0 1 1 1 0 Serine aminopeptidase, S33 DLH PF01738.18 ORF1394 - 0.033 13.7 0.0 0.037 13.6 0.0 1.1 1 0 0 1 1 1 0 Dienelactone hydrolase family Transposase_1 PF01359.18 ORF13543 - 0.045 13.6 0.2 0.082 12.7 0.2 1.5 1 0 0 1 1 1 0 Transposase (partial DDE domain) PIP49_C PF12260.8 ORF13543 - 0.12 11.9 5.1 0.13 11.9 4.4 1.3 1 1 0 1 1 1 0 Protein-kinase domain of FAM69 MMPL PF03176.15 ORF13543 - 0.34 9.8 0.0 0.34 9.8 0.0 1.0 1 0 0 1 1 1 0 MMPL family Pepdidase_M14_N PF18027.1 ORF13536 - 8.9e-12 45.3 0.0 1.2e-11 44.9 0.0 1.1 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain G3P_antiterm PF04309.12 ORF13425 - 0.095 12.1 0.1 0.15 11.5 0.1 1.3 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator IKKbetaNEMObind PF12179.8 ORF13425 - 0.13 12.3 0.1 0.31 11.1 0.1 1.6 1 0 0 1 1 1 0 I-kappa-kinase-beta NEMO binding domain FKS1_dom1 PF14288.6 ORF13186 - 0.0012 19.2 0.4 0.0015 18.9 0.4 1.1 1 0 0 1 1 1 1 1,3-beta-glucan synthase subunit FKS1, domain-1 Zein-binding PF04576.15 ORF13186 - 0.047 14.0 0.9 0.089 13.1 0.6 1.6 1 1 0 1 1 1 0 Zein-binding Trp_oprn_chp PF09534.10 ORF12444 - 0.027 14.3 1.2 0.031 14.1 1.2 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) PEP-CTERM PF07589.11 ORF12275 - 0.093 12.8 0.9 0.093 12.8 0.9 2.1 2 0 0 2 2 2 0 PEP-CTERM motif DUF2471 PF10616.9 ORF11660 - 0.085 13.4 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2471) HDA2-3 PF11496.8 ORF11487 - 0.018 14.2 2.3 0.022 13.9 2.3 1.0 1 0 0 1 1 1 0 Class II histone deacetylase complex subunits 2 and 3 Glyco_tranf_2_3 PF13641.6 ORF11487 - 0.1 12.5 0.0 0.11 12.4 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase like family 2 MAP17 PF15807.5 ORF1141 - 0.02 15.1 0.5 0.027 14.7 0.5 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF3295 PF11702.8 ORF1141 - 0.04 13.3 0.2 0.046 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) Shisa PF13908.6 ORF1141 - 0.093 13.0 3.1 0.14 12.4 3.0 1.3 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator FAM176 PF14851.6 ORF1141 - 0.28 10.9 4.8 0.94 9.1 4.8 1.9 1 1 0 1 1 1 0 FAM176 family Wzy_C PF04932.15 ORF11395 - 1.1 8.9 6.5 8.4 6.0 1.8 2.1 2 0 0 2 2 2 0 O-Antigen ligase zf-LITAF-like PF10601.9 ORF111619 - 0.0075 16.5 2.6 0.013 15.7 2.6 1.4 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Rb_C PF08934.10 ORF111619 - 0.031 14.1 0.1 0.036 13.9 0.1 1.2 1 0 0 1 1 1 0 Rb C-terminal domain CEP19 PF14933.6 ORF111312 - 0.034 14.5 0.6 0.044 14.1 0.6 1.1 1 0 0 1 1 1 0 CEP19-like protein JHY PF15261.6 ORF110586 - 1.8e-10 41.6 0.2 2e-10 41.5 0.2 1.1 1 0 0 1 1 1 1 Jhy protein Transgly_assoc PF04226.13 ORF109471 - 0.046 14.0 1.2 0.095 13.0 1.2 1.6 1 0 0 1 1 1 0 Transglycosylase associated protein DUF1232 PF06803.12 ORF109224 - 5.1e-08 32.6 8.1 7.6e-08 32.0 8.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) FMN_red PF03358.15 ORF108507 - 0.0018 18.0 0.1 0.0026 17.5 0.1 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase DUF350 PF03994.14 ORF106314 - 0.12 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF350) 2OG-FeII_Oxy_3 PF13640.6 ORF105360 - 0.0024 18.7 0.0 0.0032 18.3 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_2 PF13532.6 ORF105360 - 0.018 15.2 0.0 0.079 13.1 0.0 1.8 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily PAH PF02671.21 ORF105039 - 0.076 13.2 0.6 0.12 12.5 0.6 1.3 1 0 0 1 1 1 0 Paired amphipathic helix repeat DUF262 PF03235.14 ORF105039 - 0.089 13.0 0.0 0.097 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF262 HeLo PF14479.6 ORF103817 - 0.068 13.0 0.2 0.07 13.0 0.2 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation ER PF01133.17 ORF103422 - 2.2e-25 88.5 0.0 2.6e-25 88.3 0.0 1.0 1 0 0 1 1 1 1 Enhancer of rudimentary SBDS PF01172.18 ORF100680 - 1.4e-28 98.8 1.4 1.7e-28 98.5 1.4 1.1 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein T4_tail_cap PF11091.8 ORF100680 - 0.004 16.1 0.1 0.004 16.1 0.1 1.1 1 0 0 1 1 1 1 Tail-tube assembly protein Peptidase_S76 PF13611.6 NODE_52253_length_343_cov_2.724026_g44333_i0forward_frame_1 - 0.079 13.3 0.1 0.094 13.0 0.1 1.1 1 0 0 1 1 1 0 Serine peptidase of plant viral polyprotein, P1 YqfQ PF14181.6 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 0.43 10.8 14.7 0.62 10.2 14.7 1.2 1 0 0 1 1 1 0 YqfQ-like protein SelP_N PF04592.14 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 4.6 6.6 8.4 5.3 6.4 8.4 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Zip PF02535.22 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 4.8 6.3 6.8 5 6.3 6.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter U79_P34 PF03064.16 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 5.3 6.3 11.6 6.2 6.1 11.6 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Presenilin PF01080.17 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 6.3 5.4 13.3 7.2 5.3 13.3 1.0 1 0 0 1 1 1 0 Presenilin Raftlin PF15250.6 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 7.6 5.2 9.6 7.9 5.1 9.6 1.0 1 0 0 1 1 1 0 Raftlin SLC12 PF03522.15 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 7.8 5.4 8.0 8.5 5.3 8.0 1.0 1 0 0 1 1 1 0 Solute carrier family 12 MFS_1 PF07690.16 NODE_52247_length_343_cov_2.905844_g44327_i0forward_frame_1 - 0.0076 15.2 8.9 0.009 15.0 8.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Formyl_trans_N PF00551.19 NODE_52245_length_343_cov_3.399351_g44325_i0reverse_frame_1 - 2e-40 138.5 0.0 2.3e-40 138.3 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase zf-CCCH PF00642.24 NODE_52243_length_343_cov_4.068182_g44323_i0reverse_frame_1 - 0.0037 17.2 5.4 0.0068 16.3 5.4 1.5 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Torus PF16131.5 NODE_52243_length_343_cov_4.068182_g44323_i0reverse_frame_1 - 0.025 15.2 1.3 0.037 14.7 1.3 1.3 1 0 0 1 1 1 0 Torus domain DUF3311 PF11755.8 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 0.011 15.6 3.6 0.011 15.6 2.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3311) TadF PF16964.5 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 0.11 12.2 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Putative tight adherence pilin protein F HEAT_UF PF18817.1 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 0.13 12.6 1.3 7.8 6.9 0.5 2.7 2 1 0 2 2 2 0 Repeat of uncharacterized protein PH0542 EphA2_TM PF14575.6 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 0.77 10.7 8.0 0.93 10.4 8.0 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF2771 PF10969.8 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 1.8 8.6 7.0 4 7.5 6.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2771) Rax2 PF12768.7 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 1.9 7.9 5.1 2.6 7.5 5.1 1.2 1 0 0 1 1 1 0 Cortical protein marker for cell polarity DUF4448 PF14610.6 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 7.1 6.4 8.4 11 5.8 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) TMEM154 PF15102.6 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 9.1 6.2 6.7 13 5.6 6.7 1.3 1 0 0 1 1 1 0 TMEM154 protein family V_ATPase_I PF01496.19 NODE_52239_length_343_cov_28.295455_g44319_i0reverse_frame_1 - 3.4e-05 22.0 0.0 4.1e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF2061 PF09834.9 NODE_52237_length_343_cov_40.311688_g44317_i0forward_frame_1 - 0.15 12.6 0.2 0.29 11.7 0.2 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2061) zf-RING_5 PF14634.6 NODE_52227_length_343_cov_72.935065_g44307_i0forward_frame_1 - 0.021 14.8 0.1 0.039 13.9 0.1 1.5 1 0 0 1 1 1 0 zinc-RING finger domain V-ATPase_H_C PF11698.8 NODE_52222_length_343_cov_81.558442_g44302_i0reverse_frame_1 - 0.029 14.5 0.5 0.038 14.1 0.5 1.1 1 0 0 1 1 1 0 V-ATPase subunit H HVSL PF09749.9 NODE_52222_length_343_cov_81.558442_g44302_i0forward_frame_1 - 0.058 12.9 0.7 0.066 12.7 0.7 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein Peptidase_A22B PF04258.13 NODE_52208_length_343_cov_151.415584_g44289_i0reverse_frame_1 - 0.00019 21.1 0.1 0.00025 20.7 0.1 1.1 1 0 0 1 1 1 1 Signal peptide peptidase HpaP PF09483.10 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_1 - 0.062 13.5 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 Type III secretion protein (HpaP) Peptidase_S49_N PF08496.10 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_1 - 6.2 6.9 14.1 7.2 6.6 14.1 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF630 PF04783.12 NODE_52197_length_343_cov_340.824675_g44278_i0forward_frame_1 - 0.026 14.7 0.0 0.049 13.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF630) Myc_target_1 PF15179.6 NODE_52195_length_343_cov_456.876623_g44276_i0forward_frame_1 - 0.046 13.6 0.3 0.056 13.3 0.3 1.1 1 0 0 1 1 1 0 Myc target protein 1 PEMT PF04191.13 NODE_52193_length_343_cov_478.464286_g44274_i0reverse_frame_1 - 0.16 12.4 2.3 0.28 11.6 2.0 1.6 1 1 1 2 2 2 0 Phospholipid methyltransferase APOBEC4 PF18775.1 NODE_52188_length_343_cov_50148.061688_g44269_i0forward_frame_1 - 0.067 13.4 0.4 0.11 12.7 0.4 1.3 1 0 0 1 1 1 0 APOBEC4 FapA PF03961.13 NODE_52187_length_344_cov_1.216828_g44268_i0forward_frame_1 - 0.006 15.2 3.3 0.0063 15.2 3.3 1.0 1 0 0 1 1 1 1 Flagellar Assembly Protein A VQ PF05678.14 NODE_52184_length_344_cov_1.676375_g44265_i0forward_frame_1 - 0.017 14.6 1.0 2.9 7.5 0.1 2.7 3 0 0 3 3 3 0 VQ motif NPIP PF06409.11 NODE_52184_length_344_cov_1.676375_g44265_i0forward_frame_1 - 0.028 13.5 0.0 0.03 13.4 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore complex interacting protein (NPIP) MDM10 PF12519.8 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 0.013 14.4 2.0 0.015 14.2 2.0 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 FAM76 PF16046.5 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 0.045 13.1 11.2 0.051 12.9 11.2 1.1 1 0 0 1 1 1 0 FAM76 protein Zip PF02535.22 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 0.15 11.2 15.5 0.18 11.0 15.5 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter ALMT PF11744.8 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 2.1 7.1 4.3 2.4 6.9 4.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter PAT1 PF09770.9 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 4.1 5.6 10.5 4.6 5.4 10.5 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Neur_chan_memb PF02932.16 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 7.2 6.6 6.4 8.3 6.4 6.4 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF749 PF05370.11 NODE_52174_length_344_cov_2.210356_g44255_i0reverse_frame_1 - 0.0056 16.7 0.2 0.014 15.5 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF749) AHJR-like PF18743.1 NODE_52173_length_344_cov_2.213592_g44254_i0forward_frame_1 - 0.095 12.3 0.1 0.17 11.4 0.0 1.5 2 0 0 2 2 2 0 REase_AHJR-like DUF3950 PF13132.6 NODE_52170_length_344_cov_2.255663_g44251_i0reverse_frame_1 - 0.069 12.9 0.9 0.3 10.9 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3950) Raco_middle PF17651.1 NODE_52164_length_344_cov_2.792880_g44245_i0forward_frame_1 - 0.1 12.2 2.4 0.13 11.9 2.4 1.0 1 0 0 1 1 1 0 RACo middle region PCNA_C PF02747.15 NODE_52155_length_344_cov_39.304207_g44236_i0reverse_frame_1 - 1.3e-18 67.4 0.0 1.9e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain DUF3557 PF12078.8 NODE_52151_length_344_cov_53.110032_g44232_i0forward_frame_1 - 0.02 14.9 1.5 1 9.3 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3557) Pkinase_Tyr PF07714.17 NODE_52141_length_344_cov_63.957929_g44222_i0forward_frame_1 - 0.041 13.2 0.3 0.053 12.8 0.3 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase RasGAP_C PF03836.15 NODE_52139_length_344_cov_66.148867_g44220_i0forward_frame_1 - 2.4 8.3 6.7 0.13 12.4 1.4 1.6 2 0 0 2 2 2 0 RasGAP C-terminus Vhr1 PF04001.13 NODE_52134_length_344_cov_73.087379_g44215_i0reverse_frame_1 - 0.042 14.2 0.8 0.16 12.2 0.1 1.9 1 1 1 2 2 2 0 Transcription factor Vhr1 zf-ribbon_3 PF13248.6 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_1 - 0.1 12.0 1.2 0.15 11.5 1.2 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Colicin-DNase PF12639.7 NODE_52116_length_344_cov_156.495146_g44197_i0reverse_frame_1 - 0.016 16.0 1.1 0.021 15.6 1.1 1.3 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin DUF3437 PF11919.8 NODE_52116_length_344_cov_156.495146_g44197_i0reverse_frame_1 - 0.52 10.3 4.4 0.24 11.3 1.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3437) BRI3BP PF14965.6 NODE_52116_length_344_cov_156.495146_g44197_i0forward_frame_1 - 0.098 12.2 2.2 0.12 11.9 2.2 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 DUF2614 PF11023.8 NODE_52116_length_344_cov_156.495146_g44197_i0forward_frame_1 - 0.15 12.1 2.2 0.28 11.3 2.2 1.4 1 0 0 1 1 1 0 Zinc-ribbon containing domain Chordopox_L2 PF05803.12 NODE_52108_length_344_cov_398.728155_g44190_i0forward_frame_1 - 0.037 13.9 2.8 0.43 10.5 0.1 2.6 2 1 0 2 2 2 0 Chordopoxvirus L2 protein Heme_oxygenase PF01126.20 NODE_52104_length_344_cov_1709.110032_g44186_i0forward_frame_1 - 0.15 11.9 0.0 0.22 11.3 0.0 1.3 1 1 0 1 1 1 0 Heme oxygenase DUF1664 PF07889.12 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.058 13.4 3.2 0.18 11.8 3.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Acetyltransf_11 PF13720.6 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.11 12.9 3.2 0.14 12.6 0.6 2.0 1 1 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ApoO PF09769.9 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.17 11.8 3.0 0.17 11.8 0.8 1.8 1 1 1 2 2 2 0 Apolipoprotein O Prominin PF05478.11 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.22 9.5 7.5 0.24 9.3 7.5 1.0 1 0 0 1 1 1 0 Prominin Fzo_mitofusin PF04799.13 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.32 10.5 7.6 0.46 10.0 3.9 2.0 1 1 1 2 2 2 0 fzo-like conserved region ADIP PF11559.8 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.49 10.5 14.8 0.32 11.1 9.4 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding FapA PF03961.13 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.5 8.9 10.9 0.55 8.8 10.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A FOXP-CC PF16159.5 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.54 10.9 5.8 13 6.5 0.2 2.8 1 1 1 2 2 2 0 FOXP coiled-coil domain DUF4407 PF14362.6 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.57 9.5 6.7 0.6 9.4 6.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Exonuc_VII_L PF02601.15 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.67 9.5 8.2 0.81 9.2 8.2 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit APG6_N PF17675.1 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 1.1 9.8 14.1 0.76 10.3 7.9 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region DivIC PF04977.15 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 1.6 8.5 12.7 2.5 7.9 4.3 2.3 1 1 1 2 2 2 0 Septum formation initiator YabA PF06156.13 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 2.6 8.7 12.9 1.3 9.7 6.9 2.1 1 1 1 2 2 2 0 Initiation control protein YabA GrpE PF01025.19 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 2.7 7.6 16.2 0.055 13.1 4.2 2.2 1 1 1 2 2 2 0 GrpE ZapB PF06005.12 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 6.3 7.3 15.4 3.5 8.1 10.5 2.2 1 1 1 2 2 2 0 Cell division protein ZapB LepB_GAP_N PF18172.1 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_1 - 0.0054 16.7 2.8 0.0064 16.4 2.8 1.2 1 0 0 1 1 1 1 LepB GAP domain N-terminal subdomain Amidase PF01425.21 NODE_52094_length_345_cov_1.538710_g44176_i0reverse_frame_1 - 4.7e-21 75.3 0.0 5.5e-21 75.1 0.0 1.0 1 0 0 1 1 1 1 Amidase T4-Gluco-transf PF09198.10 NODE_52092_length_345_cov_1.677419_g44174_i0forward_frame_1 - 0.076 12.6 0.1 0.15 11.7 0.1 1.5 1 0 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase Flavodoxin_1 PF00258.25 NODE_52079_length_345_cov_2.367742_g44161_i0forward_frame_1 - 1.2e-05 25.5 0.0 0.00011 22.4 0.0 2.0 1 1 1 2 2 2 1 Flavodoxin FMN_red PF03358.15 NODE_52079_length_345_cov_2.367742_g44161_i0forward_frame_1 - 0.0012 18.6 0.0 0.0014 18.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_5 PF12724.7 NODE_52079_length_345_cov_2.367742_g44161_i0forward_frame_1 - 0.0028 17.9 0.0 0.54 10.5 0.0 2.1 1 1 1 2 2 2 2 Flavodoxin domain TPR_1 PF00515.28 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_1 - 0.0037 17.0 0.1 0.0092 15.8 0.1 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_1 - 0.011 15.8 0.3 0.12 12.5 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Slp PF03843.13 NODE_52076_length_345_cov_2.500000_g44158_i0reverse_frame_1 - 1.1e-33 115.8 0.0 1.3e-33 115.6 0.0 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein Slp family fn2 PF00040.19 NODE_52075_length_345_cov_2.587097_g44157_i0reverse_frame_1 - 0.015 15.5 1.2 0.023 15.0 1.2 1.3 1 0 0 1 1 1 0 Fibronectin type II domain Exo_endo_phos_2 PF14529.6 NODE_52070_length_345_cov_2.812903_g44152_i0reverse_frame_1 - 0.056 13.3 0.0 0.078 12.8 0.0 1.3 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase FAM194 PF14977.6 NODE_52069_length_345_cov_2.851613_g44151_i0reverse_frame_1 - 0.16 11.3 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 FAM194 protein Kelch_4 PF13418.6 NODE_52068_length_345_cov_2.925806_g44150_i0reverse_frame_1 - 0.013 15.5 0.1 0.023 14.7 0.1 1.4 1 1 0 1 1 1 0 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_52068_length_345_cov_2.925806_g44150_i0reverse_frame_1 - 0.19 11.8 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 Kelch motif ATP_synt_H PF05493.13 NODE_52068_length_345_cov_2.925806_g44150_i0forward_frame_1 - 1.3 9.6 7.5 2.9 8.4 7.5 1.7 1 1 0 1 1 1 0 ATP synthase subunit H Kelch_4 PF13418.6 NODE_52067_length_345_cov_2.948387_g44149_i0forward_frame_1 - 7.1e-05 22.7 0.4 0.032 14.2 0.0 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_52067_length_345_cov_2.948387_g44149_i0forward_frame_1 - 0.00013 22.2 0.0 0.0095 16.2 0.0 2.3 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_52067_length_345_cov_2.948387_g44149_i0forward_frame_1 - 0.008 16.2 0.3 0.047 13.7 0.3 2.2 1 1 0 1 1 1 1 Kelch motif DUF1180 PF06679.12 NODE_52050_length_345_cov_52.638710_g44132_i0forward_frame_1 - 0.015 15.7 0.7 0.02 15.3 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) ATP-synt_8 PF00895.20 NODE_52045_length_345_cov_66.996774_g44127_i0forward_frame_1 - 7.6 7.1 8.1 12 6.5 7.5 1.7 1 1 0 1 1 1 0 ATP synthase protein 8 Opi1 PF08618.10 NODE_52032_length_345_cov_91.364516_g44114_i0forward_frame_1 - 0.071 12.4 2.7 0.088 12.0 2.7 1.1 1 0 0 1 1 1 0 Transcription factor Opi1 Fer4_23 PF18009.1 NODE_52031_length_345_cov_100.941935_g44113_i0reverse_frame_1 - 0.046 14.1 0.1 0.062 13.7 0.1 1.2 1 0 0 1 1 1 0 4Fe-4S iron-sulfur cluster binding domain PetL PF05115.14 NODE_52027_length_345_cov_111.441935_g44109_i0reverse_frame_1 - 1.9 8.5 8.4 3 7.9 8.4 1.3 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) Ribosomal_S14 PF00253.21 NODE_52015_length_345_cov_3852.041935_g44098_i0reverse_frame_1 - 3.1e-11 42.8 4.6 4.9e-11 42.2 1.4 2.1 1 1 1 2 2 2 1 Ribosomal protein S14p/S29e Fanconi_A PF03511.14 NODE_52009_length_346_cov_1.533762_g44092_i0reverse_frame_2 - 0.14 12.1 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 Fanconi anaemia group A protein LepA_C PF06421.12 NODE_52008_length_346_cov_1.627010_g44091_i0forward_frame_3 - 0.026 14.7 0.8 0.037 14.2 0.8 1.4 1 1 0 1 1 1 0 GTP-binding protein LepA C-terminus Anti-adapt_IraP PF10796.9 NODE_52008_length_346_cov_1.627010_g44091_i0forward_frame_2 - 0.00041 20.9 0.1 0.00058 20.4 0.1 1.3 1 0 0 1 1 1 1 Sigma-S stabilisation anti-adaptor protein OEP PF02321.18 NODE_52006_length_346_cov_1.803859_g44089_i0forward_frame_2 - 0.0042 16.9 0.8 0.0049 16.7 0.8 1.1 1 0 0 1 1 1 1 Outer membrane efflux protein TrbI_Ftype PF09677.10 NODE_52006_length_346_cov_1.803859_g44089_i0forward_frame_2 - 0.09 13.1 0.3 0.12 12.6 0.3 1.3 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) MgsA_C PF12002.8 NODE_52006_length_346_cov_1.803859_g44089_i0forward_frame_2 - 0.16 11.9 1.5 0.19 11.6 1.5 1.1 1 0 0 1 1 1 0 MgsA AAA+ ATPase C terminal YqhG PF11079.8 NODE_52003_length_346_cov_1.890675_g44086_i0reverse_frame_2 - 0.046 12.7 0.4 0.048 12.6 0.4 1.1 1 0 0 1 1 1 0 Bacterial protein YqhG of unknown function DUF3342 PF11822.8 NODE_52002_length_346_cov_1.971061_g44085_i0reverse_frame_3 - 3.5e-08 33.5 0.6 4.8e-08 33.1 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks202.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks202.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks202.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks202.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HTH_Tnp_4 PF13613.6 NODE_52000_length_346_cov_2.045016_g44083_i0forward_frame_2 - 0.069 12.9 0.3 3.1 7.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease Knl1_RWD_C PF18210.1 NODE_52000_length_346_cov_2.045016_g44083_i0forward_frame_2 - 0.82 10.2 4.8 10 6.7 1.1 2.2 1 1 0 2 2 2 0 Knl1 RWD C-terminal domain SHIPPO-rpt PF07004.12 NODE_51990_length_346_cov_2.524116_g44073_i0forward_frame_2 - 0.0058 17.5 7.8 0.0085 17.0 0.3 2.8 2 1 0 2 2 2 1 Sperm-tail PG-rich repeat PhoU PF01895.19 NODE_51986_length_346_cov_2.913183_g44069_i0reverse_frame_3 - 0.052 14.0 0.4 0.084 13.3 0.4 1.3 1 0 0 1 1 1 0 PhoU domain ApoO PF09769.9 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 0.066 13.2 0.6 0.066 13.2 0.6 2.1 1 1 1 2 2 2 0 Apolipoprotein O DUF3584 PF12128.8 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 0.31 8.5 25.0 0.42 8.1 25.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 0.38 10.6 24.1 0.46 10.3 24.1 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Tmemb_cc2 PF10267.9 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 0.49 9.5 21.7 0.59 9.2 21.7 1.1 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein Jacalin PF01419.17 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 0.52 10.3 3.1 0.67 9.9 2.7 1.4 1 1 0 1 1 1 0 Jacalin-like lectin domain DUF5082 PF16888.5 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 0.63 10.3 21.0 0.84 9.9 21.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) AAA_32 PF13654.6 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 0.66 8.7 20.7 1.2 7.9 20.7 1.5 1 1 0 1 1 1 0 AAA domain CdvA PF18822.1 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 2 8.2 23.9 0.14 12.0 11.5 2.8 1 1 2 3 3 3 0 CdvA-like coiled-coil domain DUF1062 PF06353.12 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 2.2 9.1 10.6 2.9 8.7 10.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1062) Prominin PF05478.11 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 3.6 5.4 12.9 4.2 5.2 12.9 1.0 1 0 0 1 1 1 0 Prominin DUF812 PF05667.11 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 4.2 6.1 28.9 4.9 5.9 28.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) BssS PF13991.6 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 4.4 7.4 7.7 1 9.5 3.8 2.0 2 1 0 2 2 2 0 BssS protein family DUF3810 PF12725.7 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 7 5.9 7.3 7.6 5.8 7.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Exonuc_VII_L PF02601.15 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 7.9 6.0 19.4 9 5.8 19.4 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin PF02996.17 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 8.7 6.3 22.3 0.6 10.0 2.5 3.3 1 1 3 4 4 4 0 Prefoldin subunit FlaC_arch PF05377.11 NODE_51979_length_346_cov_3.678457_g44062_i0reverse_frame_3 - 9.1 6.8 19.2 3 8.3 6.4 3.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Ycf70 PF17382.2 NODE_51978_length_346_cov_3.848875_g44061_i0reverse_frame_2 - 8 6.9 8.0 2.1 8.8 4.4 1.8 1 1 1 2 2 2 0 Uncharacterized Ycf70-like Syntaxin-6_N PF09177.11 NODE_51978_length_346_cov_3.848875_g44061_i0forward_frame_2 - 0.011 16.3 4.7 0.013 16.0 4.7 1.3 1 0 0 1 1 1 0 Syntaxin 6, N-terminal zf-C3HC PF07967.13 NODE_51978_length_346_cov_3.848875_g44061_i0forward_frame_2 - 0.017 15.2 3.2 0.029 14.4 3.2 1.5 1 1 0 1 1 1 0 C3HC zinc finger-like CHDCT2 PF08074.11 NODE_51978_length_346_cov_3.848875_g44061_i0forward_frame_2 - 0.023 14.9 2.4 0.025 14.8 2.4 1.0 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain Pkinase PF00069.25 NODE_51976_length_346_cov_11.012862_g44059_i0forward_frame_2 - 0.0058 16.0 0.3 0.042 13.2 0.0 2.0 2 0 0 2 2 2 1 Protein kinase domain NAD_binding_5 PF07994.12 NODE_51976_length_346_cov_11.012862_g44059_i0forward_frame_2 - 0.15 11.4 0.1 0.18 11.1 0.1 1.1 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase UCH PF00443.29 NODE_51975_length_346_cov_12.980707_g44058_i0forward_frame_3 - 0.013 15.0 0.1 0.025 14.1 0.0 1.5 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase BAF250_C PF12031.8 NODE_51972_length_346_cov_45.842444_g44055_i0forward_frame_3 - 0.0067 15.8 0.3 0.0082 15.5 0.3 1.2 1 0 0 1 1 1 1 SWI/SNF-like complex subunit BAF250/Osa US6 PF17616.2 NODE_51971_length_346_cov_51.192926_g44054_i0forward_frame_2 - 0.091 12.7 0.5 0.17 11.8 0.5 1.4 1 0 0 1 1 1 0 Viral unique short region 6 IMUP PF15761.5 NODE_51967_length_346_cov_63.057878_g44050_i0forward_frame_2 - 0.17 12.6 2.3 0.69 10.6 2.3 1.8 1 1 0 1 1 1 0 Immortalisation up-regulated protein EF-hand_1 PF00036.32 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 6.3e-07 28.5 0.3 1.6e-06 27.2 0.3 1.8 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 1.9e-06 28.2 1.1 2.6e-06 27.8 1.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 4.4e-06 26.2 0.2 1e-05 25.0 0.2 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 4.5e-06 25.9 2.0 5.6e-06 25.6 0.5 2.0 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 0.0013 18.5 1.6 0.01 15.7 0.4 2.5 1 1 1 2 2 2 1 EF-hand domain pair DUF1825 PF08855.10 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 0.012 15.6 0.7 0.016 15.1 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) PhetRS_B1 PF18262.1 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 0.09 13.0 0.9 0.15 12.3 0.9 1.5 1 0 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain TSKS PF15358.6 NODE_51961_length_346_cov_69.347267_g44044_i0forward_frame_2 - 0.0038 15.7 0.3 0.0044 15.5 0.3 1.0 1 0 0 1 1 1 1 Testis-specific serine kinase substrate RCC1_2 PF13540.6 NODE_51952_length_346_cov_110.942122_g44035_i0reverse_frame_3 - 0.00054 19.7 9.4 0.9 9.4 0.1 3.6 3 1 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_51952_length_346_cov_110.942122_g44035_i0reverse_frame_3 - 0.0097 16.0 0.5 19 5.3 0.0 3.0 3 0 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Lipocalin_7 PF14651.6 NODE_51952_length_346_cov_110.942122_g44035_i0reverse_frame_3 - 0.32 10.9 1.7 3 7.8 1.0 2.1 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family PheRS_DBD2 PF18554.1 NODE_51952_length_346_cov_110.942122_g44035_i0reverse_frame_3 - 2.9 8.0 6.7 6.5 6.8 0.5 3.0 3 0 0 3 3 3 0 PheRS DNA binding domain 2 DUF3552 PF12072.8 NODE_51952_length_346_cov_110.942122_g44035_i0forward_frame_2 - 0.011 15.1 0.1 0.016 14.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) PetL PF05115.14 NODE_51949_length_346_cov_140.051447_g44032_i0reverse_frame_3 - 2.1 8.4 8.4 3 7.9 8.4 1.2 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) Gp45_2 PF17470.2 NODE_51947_length_346_cov_194.527331_g44030_i0reverse_frame_3 - 0.043 13.8 0.1 0.08 12.9 0.1 1.4 1 0 0 1 1 1 0 Phage gene product 45.2 Babuvirus_MP PF07234.11 NODE_51947_length_346_cov_194.527331_g44030_i0forward_frame_2 - 6.2 7.0 7.4 0.82 9.8 3.2 1.6 1 1 1 2 2 2 0 Movement and RNA silencing protein BicD PF09730.9 NODE_51946_length_346_cov_208.514469_g44029_i0forward_frame_2 - 0.0018 16.8 1.1 0.0019 16.7 1.1 1.1 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D Rad54_N PF08658.10 NODE_51946_length_346_cov_208.514469_g44029_i0forward_frame_2 - 0.016 15.3 0.3 0.018 15.2 0.3 1.0 1 0 0 1 1 1 0 Rad54 N terminal CLZ PF16526.5 NODE_51946_length_346_cov_208.514469_g44029_i0forward_frame_2 - 0.21 11.9 2.5 0.6 10.5 2.5 1.8 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4691 PF15762.5 NODE_51944_length_346_cov_284.475884_g44027_i0forward_frame_3 - 0.0089 16.2 0.8 0.01 16.0 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4691) MORN PF02493.20 NODE_51939_length_346_cov_1042.009646_g44022_i0forward_frame_3 - 4.5e-19 67.1 17.2 4.1e-07 29.5 0.5 3.9 4 0 0 4 4 4 3 MORN repeat SpoOE-like PF09388.10 NODE_51937_length_346_cov_1168.424437_g44021_i0reverse_frame_2 - 0.18 11.7 0.2 19 5.3 0.0 2.4 2 0 0 2 2 2 0 Spo0E like sporulation regulatory protein DUF4079 PF13301.6 NODE_51932_length_346_cov_17528.887460_g44016_i0forward_frame_2 - 1.1 9.4 4.1 6.4 6.9 4.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) FtsX PF02687.21 NODE_51931_length_346_cov_141863.623794_g44015_i0forward_frame_3 - 0.25 11.8 16.4 0.32 11.5 16.4 1.1 1 0 0 1 1 1 0 FtsX-like permease family Glyco_transf_20 PF00982.21 NODE_51931_length_346_cov_141863.623794_g44015_i0forward_frame_2 - 9.8 4.7 6.8 12 4.4 6.8 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 Sigma54_AID PF00309.20 NODE_51928_length_347_cov_1.272436_g44012_i0reverse_frame_3 - 0.039 13.8 0.5 0.078 12.8 0.5 1.5 1 0 0 1 1 1 0 Sigma-54 factor, Activator interacting domain (AID) ALG3 PF05208.13 NODE_51928_length_347_cov_1.272436_g44012_i0forward_frame_3 - 1.4e-09 37.9 3.4 1.4e-09 37.9 3.4 1.2 1 1 0 1 1 1 1 ALG3 protein Syd PF07348.12 NODE_51927_length_347_cov_1.278846_g44011_i0reverse_frame_2 - 0.034 13.8 0.7 0.042 13.5 0.7 1.1 1 0 0 1 1 1 0 Syd protein (SUKH-2) CDP-OH_P_tran_2 PF08009.11 NODE_51927_length_347_cov_1.278846_g44011_i0forward_frame_2 - 0.031 14.2 0.1 0.031 14.2 0.1 2.1 2 0 0 2 2 2 0 CDP-alcohol phosphatidyltransferase 2 Helicase_C_4 PF13871.6 NODE_51926_length_347_cov_1.352564_g44010_i0forward_frame_3 - 0.12 12.0 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 C-terminal domain on Strawberry notch homologue EXOSC1 PF10447.9 NODE_51924_length_347_cov_1.419872_g44008_i0reverse_frame_3 - 6e-05 23.6 0.0 0.00011 22.8 0.0 1.4 1 0 0 1 1 1 1 Exosome component EXOSC1/CSL4 RMI1_C PF16099.5 NODE_51924_length_347_cov_1.419872_g44008_i0reverse_frame_3 - 0.087 12.7 0.0 0.099 12.5 0.0 1.2 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold NADHdh PF00146.21 NODE_51921_length_347_cov_1.644231_g44005_i0reverse_frame_2 - 0.065 12.5 1.6 0.1 11.9 1.6 1.3 1 0 0 1 1 1 0 NADH dehydrogenase MxiM PF11441.8 NODE_51919_length_347_cov_1.794872_g44003_i0forward_frame_2 - 0.014 15.7 0.2 0.018 15.3 0.2 1.3 1 1 0 1 1 1 0 Pilot protein MxiM DUF3258 PF11646.8 NODE_51919_length_347_cov_1.794872_g44003_i0forward_frame_2 - 0.031 14.4 0.2 0.042 14.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF3258 Adeno_E1B_55K PF01696.17 NODE_51919_length_347_cov_1.794872_g44003_i0forward_frame_2 - 0.035 12.8 0.0 0.044 12.5 0.0 1.1 1 0 0 1 1 1 0 Adenovirus EB1 55K protein / large t-antigen Iso_dh PF00180.20 NODE_51918_length_347_cov_1.891026_g44002_i0reverse_frame_3 - 3.3e-22 79.1 0.0 4.2e-22 78.8 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Fibrillin_U_N PF18193.1 NODE_51917_length_347_cov_1.942308_g44001_i0forward_frame_3 - 0.062 13.4 2.8 0.15 12.2 2.8 1.7 1 0 0 1 1 1 0 Fibrillin 1 unique N-terminal domain Herpes_ICP4_C PF03585.14 NODE_51913_length_347_cov_1.996795_g43997_i0reverse_frame_2 - 0.054 12.2 0.0 0.062 12.0 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus ICP4-like protein C-terminal region SLATT_4 PF18186.1 NODE_51912_length_347_cov_2.112179_g43996_i0forward_frame_2 - 0.14 11.8 0.9 0.21 11.2 0.9 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 PAGK PF15284.6 NODE_51908_length_347_cov_2.544872_g43992_i0forward_frame_3 - 0.038 13.9 0.2 0.13 12.2 0.0 1.8 1 1 1 2 2 2 0 Phage-encoded virulence factor Mannitol_dh_C PF08125.13 NODE_51907_length_347_cov_2.663462_g43991_i0reverse_frame_3 - 4.1e-05 23.2 0.0 4.9e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Pou PF00157.17 NODE_51905_length_347_cov_2.705128_g43989_i0forward_frame_3 - 0.13 12.3 0.1 0.17 11.9 0.1 1.3 1 0 0 1 1 1 0 Pou domain - N-terminal to homeobox domain FERM_N PF09379.10 NODE_51904_length_347_cov_2.794872_g43988_i0reverse_frame_2 - 0.16 11.9 0.2 0.33 10.9 0.1 1.5 2 0 0 2 2 2 0 FERM N-terminal domain FXa_inhibition PF14670.6 NODE_51904_length_347_cov_2.794872_g43988_i0forward_frame_3 - 0.58 10.5 8.5 6.7 7.1 0.1 2.6 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site DUF1514 PF07438.11 NODE_51901_length_347_cov_3.105769_g43985_i0reverse_frame_2 - 0.95 9.4 4.3 11 6.0 2.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1514) AC_N PF16214.5 NODE_51900_length_347_cov_3.160256_g43984_i0reverse_frame_3 - 0.24 10.5 1.1 0.29 10.2 1.1 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region CCDC85 PF10226.9 NODE_51899_length_347_cov_3.233974_g43983_i0reverse_frame_3 - 0.02 14.6 0.0 0.021 14.5 0.0 1.1 1 0 0 1 1 1 0 CCDC85 family Tautomerase PF01361.21 NODE_51899_length_347_cov_3.233974_g43983_i0reverse_frame_3 - 0.061 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Tautomerase enzyme CENP-B_N PF04218.13 NODE_51899_length_347_cov_3.233974_g43983_i0reverse_frame_3 - 0.062 13.0 0.2 0.15 11.7 0.0 1.7 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain Acetyltransf_16 PF05301.11 NODE_51895_length_347_cov_3.891026_g43979_i0reverse_frame_3 - 1.1e-08 35.0 0.0 1.3e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Vps16_N PF04841.13 NODE_51895_length_347_cov_3.891026_g43979_i0reverse_frame_3 - 0.16 10.7 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Vps16, N-terminal region DUF4056 PF13265.6 NODE_51892_length_347_cov_12.663462_g43976_i0reverse_frame_3 - 0.12 11.6 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4056) Glyco_H_20C_C PF18088.1 NODE_51890_length_347_cov_32.358974_g43974_i0forward_frame_3 - 0.015 15.2 0.2 0.018 14.9 0.2 1.1 1 0 0 1 1 1 0 Glycoside Hydrolase 20C C-terminal domain Viral_cys_rich PF08008.12 NODE_51890_length_347_cov_32.358974_g43974_i0forward_frame_3 - 0.13 12.4 0.3 12 6.0 0.0 2.2 2 0 0 2 2 2 0 Viral cysteine rich Dickkopf_N PF04706.12 NODE_51888_length_347_cov_51.887821_g43972_i0forward_frame_3 - 0.09 13.3 5.1 0.1 13.1 1.5 2.1 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region HMG_box PF00505.19 NODE_51884_length_347_cov_58.631410_g43968_i0reverse_frame_2 - 1.4e-06 28.6 6.0 2.2e-06 28.0 6.0 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_51884_length_347_cov_58.631410_g43968_i0reverse_frame_2 - 1.6e-05 25.4 4.3 2.7e-05 24.7 4.3 1.4 1 0 0 1 1 1 1 HMG-box domain Sad1_UNC PF07738.13 NODE_51883_length_347_cov_60.009615_g43967_i0forward_frame_3 - 0.066 13.2 1.1 0.1 12.6 0.7 1.5 1 1 1 2 2 2 0 Sad1 / UNC-like C-terminal Sporozoite_P67 PF05642.11 NODE_51877_length_347_cov_65.900641_g43961_i0reverse_frame_2 - 0.25 9.4 1.8 0.27 9.3 1.8 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen CAP PF00188.26 NODE_51876_length_347_cov_67.961538_g43960_i0reverse_frame_3 - 3.3e-09 37.6 0.1 4.3e-09 37.3 0.1 1.1 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DUF4679 PF15728.5 NODE_51875_length_347_cov_70.810897_g43959_i0reverse_frame_3 - 0.83 8.6 10.9 0.99 8.4 10.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) MFMR_assoc PF16596.5 NODE_51875_length_347_cov_70.810897_g43959_i0reverse_frame_2 - 0.03 14.8 6.0 0.043 14.3 6.0 1.3 1 0 0 1 1 1 0 Disordered region downstream of MFMR FA_desaturase PF00487.24 NODE_51875_length_347_cov_70.810897_g43959_i0forward_frame_2 - 2.1 8.1 9.4 2.1 8.1 9.4 1.2 1 0 0 1 1 1 0 Fatty acid desaturase MMPL PF03176.15 NODE_51875_length_347_cov_70.810897_g43959_i0forward_frame_2 - 8.6 5.2 10.5 10 5.0 10.5 1.1 1 0 0 1 1 1 0 MMPL family SyrA PF11089.8 NODE_51868_length_347_cov_94.875000_g43952_i0reverse_frame_2 - 0.13 12.3 0.9 0.33 11.0 0.2 1.9 2 0 0 2 2 2 0 Exopolysaccharide production repressor FGFR3_TM PF18123.1 NODE_51864_length_347_cov_106.698718_g43948_i0forward_frame_2 - 2.9 7.5 5.5 1.2 8.7 2.8 1.8 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Histone_H2A_C PF16211.5 NODE_51863_length_347_cov_122.025641_g43947_i0forward_frame_2 - 0.31 10.8 2.2 0.55 10.0 2.2 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A IMUP PF15761.5 NODE_51859_length_347_cov_143.932692_g43943_i0reverse_frame_3 - 0.22 12.2 8.2 0.3 11.8 8.2 1.3 1 1 0 1 1 1 0 Immortalisation up-regulated protein zf-C3Hc3H PF13891.6 NODE_51849_length_347_cov_1040.073718_g43933_i0reverse_frame_2 - 0.06 13.7 7.2 2.7 8.4 5.9 2.2 1 1 1 2 2 2 0 Potential DNA-binding domain HSBP1 PF06825.12 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 4.6e-27 93.6 2.3 6.4e-27 93.2 2.3 1.2 1 0 0 1 1 1 1 Heat shock factor binding protein 1 Baculo_PEP_C PF04513.12 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 0.0012 18.9 1.8 0.0014 18.7 1.8 1.1 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus CLZ PF16526.5 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 0.012 16.0 0.1 0.023 15.1 0.1 1.5 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels BORCS6 PF10157.9 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 0.015 15.5 0.4 0.018 15.3 0.4 1.1 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 Erythro-docking PF09277.11 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 0.053 13.4 0.4 0.092 12.7 0.4 1.3 1 0 0 1 1 1 0 Erythronolide synthase, docking Aa_trans PF01490.18 NODE_51845_length_348_cov_0.987220_g43930_i0forward_frame_2 - 0.0039 16.0 0.2 0.0045 15.7 0.2 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF5621 PF18532.1 NODE_51842_length_348_cov_1.364217_g43927_i0forward_frame_3 - 0.0012 18.8 1.1 0.0012 18.8 1.1 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF5621) CoA_transf_3 PF02515.17 NODE_51841_length_348_cov_1.450479_g43926_i0reverse_frame_2 - 6.7e-19 68.2 0.0 7.6e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III DUF4304 PF14137.6 NODE_51837_length_348_cov_1.623003_g43922_i0reverse_frame_3 - 0.046 13.9 0.3 0.076 13.2 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4304) UCH PF00443.29 NODE_51835_length_348_cov_1.699681_g43920_i0reverse_frame_2 - 0.0006 19.4 0.1 0.00068 19.2 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MatE PF01554.18 NODE_51831_length_348_cov_1.968051_g43916_i0forward_frame_3 - 8.3e-12 45.0 0.5 8.3e-12 45.0 0.5 1.8 1 1 1 2 2 2 1 MatE Polysacc_synt_C PF14667.6 NODE_51831_length_348_cov_1.968051_g43916_i0forward_frame_3 - 0.00042 20.4 9.7 0.00049 20.2 9.7 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain Merozoite_SPAM PF07133.11 NODE_51828_length_348_cov_2.015974_g43913_i0reverse_frame_3 - 0.066 13.2 5.4 0.089 12.8 5.4 1.3 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) Skp1_POZ PF03931.15 NODE_51823_length_348_cov_2.150160_g43908_i0reverse_frame_3 - 0.0032 17.6 1.5 0.0058 16.8 0.1 2.0 2 1 0 2 2 2 1 Skp1 family, tetramerisation domain FlaC_arch PF05377.11 NODE_51819_length_348_cov_2.319489_g43904_i0forward_frame_3 - 0.029 14.8 5.0 2.9 8.4 0.1 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Spatacsin_C PF14649.6 NODE_51815_length_348_cov_2.437700_g43900_i0forward_frame_2 - 0.018 14.1 0.1 0.022 13.9 0.1 1.3 1 1 0 1 1 1 0 Spatacsin C-terminus Rav1p_C PF12234.8 NODE_51814_length_348_cov_2.482428_g43899_i0reverse_frame_2 - 0.084 11.3 0.0 0.097 11.1 0.0 1.0 1 0 0 1 1 1 0 RAVE protein 1 C terminal Nodulin_late PF07127.11 NODE_51814_length_348_cov_2.482428_g43899_i0reverse_frame_2 - 0.41 11.0 0.3 0.41 11.0 0.3 1.9 2 0 0 2 2 2 0 Late nodulin protein Pkinase PF00069.25 NODE_51814_length_348_cov_2.482428_g43899_i0forward_frame_2 - 0.0025 17.2 0.0 0.0032 16.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Glyco_transf_41 PF13844.6 NODE_51814_length_348_cov_2.482428_g43899_i0forward_frame_2 - 0.051 12.0 0.0 0.062 11.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 41 TraF PF13728.6 NODE_51808_length_348_cov_2.955272_g43893_i0reverse_frame_2 - 0.0088 15.9 0.0 0.011 15.6 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Surfac_D-trimer PF09006.11 NODE_51807_length_348_cov_2.974441_g43892_i0reverse_frame_2 - 0.27 11.2 3.1 4.7 7.2 1.0 2.3 2 0 0 2 2 2 0 Lung surfactant protein D coiled-coil trimerisation Peptidase_S15 PF02129.18 NODE_51807_length_348_cov_2.974441_g43892_i0forward_frame_3 - 0.14 11.7 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) RICH PF05062.12 NODE_51806_length_348_cov_3.089457_g43891_i0reverse_frame_3 - 0.07 13.5 0.5 0.14 12.6 0.5 1.5 1 0 0 1 1 1 0 RICH domain Cas9_PI2 PF18070.1 NODE_51803_length_348_cov_3.396166_g43888_i0forward_frame_3 - 0.064 14.0 0.2 0.11 13.2 0.2 1.4 1 0 0 1 1 1 0 CRISPR-Cas9 PI domain DUF1688 PF07958.11 NODE_51799_length_348_cov_3.945687_g43884_i0reverse_frame_2 - 0.055 12.2 0.0 0.062 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1688) Antistasin PF02822.14 NODE_51797_length_348_cov_4.424920_g43882_i0reverse_frame_3 - 0.044 14.4 0.5 0.044 14.4 0.5 2.2 2 0 0 2 2 2 0 Antistasin family NPC1_N PF16414.5 NODE_51797_length_348_cov_4.424920_g43882_i0forward_frame_3 - 0.048 13.2 0.8 0.06 12.9 0.8 1.1 1 0 0 1 1 1 0 Niemann-Pick C1 N terminus DMPK_coil PF08826.10 NODE_51796_length_348_cov_5.661342_g43881_i0reverse_frame_2 - 0.2 11.8 1.2 3.6 7.8 0.2 2.2 1 1 1 2 2 2 0 DMPK coiled coil domain like Goodbye PF17109.5 NODE_51794_length_348_cov_45.348243_g43879_i0reverse_frame_2 - 0.046 14.2 0.0 0.057 13.9 0.0 1.2 1 0 0 1 1 1 0 fungal STAND N-terminal Goodbye domain FYVE PF01363.21 NODE_51791_length_348_cov_53.792332_g43292_i1forward_frame_2 - 0.34 11.1 6.2 0.42 10.8 6.2 1.4 1 1 0 1 1 1 0 FYVE zinc finger RhoGEF PF00621.20 NODE_51789_length_348_cov_67.952077_g43875_i0reverse_frame_2 - 2e-08 34.7 0.0 2.5e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 RhoGEF domain NTP_transf_2 PF01909.23 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 1.7e-06 28.3 0.1 3.7e-06 27.1 0.1 1.8 1 1 1 2 2 2 1 Nucleotidyltransferase domain Polbeta PF18765.1 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 5.8e-05 23.1 1.4 0.00011 22.2 0.2 1.9 1 1 1 2 2 2 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 0.013 15.7 0.5 0.015 15.5 0.1 1.4 2 0 0 2 2 2 0 DNA polymerase beta palm DUF4269 PF14091.6 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 0.016 15.5 0.2 0.018 15.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) DUF1359 PF07097.11 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 0.02 15.1 0.5 0.025 14.8 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1359) Abhydrolase_8 PF06259.12 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 0.052 13.2 0.0 0.061 12.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase SCIFF PF13165.6 NODE_51785_length_348_cov_75.936102_g43871_i0forward_frame_2 - 0.095 12.6 1.7 0.21 11.6 1.7 1.6 1 0 0 1 1 1 0 Six-cysteine peptide SCIFF D5_N PF08706.11 NODE_51784_length_348_cov_78.102236_g43870_i0forward_frame_3 - 0.0018 18.5 0.6 0.0019 18.4 0.6 1.2 1 0 0 1 1 1 1 D5 N terminal like DUF1510 PF07423.11 NODE_51783_length_348_cov_80.849840_g43869_i0forward_frame_3 - 0.062 13.5 0.0 0.086 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1510) BT1 PF03092.16 NODE_51780_length_348_cov_84.476038_g43866_i0reverse_frame_3 - 5e-05 21.7 0.0 6.1e-05 21.4 0.0 1.0 1 0 0 1 1 1 1 BT1 family Htr2 PF17909.1 NODE_51779_length_348_cov_89.591054_g43865_i0reverse_frame_2 - 0.16 12.2 0.4 0.27 11.5 0.3 1.4 1 1 0 1 1 1 0 Htr2 transmembrane domain Sel1 PF08238.12 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 5.8e-07 30.0 0.1 1.9e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 Sel1 repeat TPR_19 PF14559.6 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 0.018 15.5 2.0 0.059 13.9 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 0.038 14.6 1.6 0.038 14.6 1.6 2.6 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 0.062 14.0 0.8 2.1 9.2 0.0 3.0 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 0.15 12.9 7.6 4.2 8.5 0.7 3.2 2 1 1 3 3 3 0 Tetratricopeptide repeat START PF01852.19 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_2 - 0.0073 15.7 0.0 0.0095 15.4 0.0 1.1 1 0 0 1 1 1 1 START domain DUF5426 PF17473.2 NODE_51778_length_348_cov_92.718850_g43864_i0forward_frame_3 - 0.16 12.2 2.8 0.21 11.9 2.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5426) Peptidase_A22B PF04258.13 NODE_51776_length_348_cov_94.792332_g43862_i0reverse_frame_2 - 2.3 7.7 12.6 2.5 7.5 12.6 1.0 1 0 0 1 1 1 0 Signal peptide peptidase PhyH PF05721.13 NODE_51776_length_348_cov_94.792332_g43862_i0forward_frame_3 - 3.8e-10 40.4 0.0 4.9e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) 2OG-FeII_Oxy_5 PF13759.6 NODE_51776_length_348_cov_94.792332_g43862_i0forward_frame_3 - 0.0061 16.9 0.0 0.0099 16.3 0.0 1.4 1 0 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase Methyltrans_RNA PF04452.14 NODE_51774_length_348_cov_112.051118_g43860_i0forward_frame_2 - 0.17 11.2 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 RNA methyltransferase Spc7_N PF15402.6 NODE_51772_length_348_cov_117.610224_g43858_i0reverse_frame_2 - 0.059 11.6 0.1 0.071 11.4 0.1 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 PDR_CDR PF06422.12 NODE_51772_length_348_cov_117.610224_g43858_i0forward_frame_2 - 9.7 6.2 10.2 0.55 10.2 2.4 2.4 1 1 0 2 2 2 0 CDR ABC transporter LAGLIDADG_WhiA PF14527.6 NODE_51771_length_348_cov_117.718850_g43857_i0reverse_frame_3 - 0.41 10.8 4.6 0.55 10.3 4.6 1.2 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain NAP PF00956.18 NODE_51767_length_348_cov_169.747604_g43853_i0forward_frame_3 - 3e-09 36.5 1.2 3e-09 36.5 1.2 1.9 1 1 1 2 2 2 1 Nucleosome assembly protein (NAP) DUF3402 PF11882.8 NODE_51767_length_348_cov_169.747604_g43853_i0forward_frame_3 - 0.017 14.3 0.0 0.018 14.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3402) Ribosomal_L41 PF05162.13 NODE_51765_length_348_cov_199.846645_g43851_i0reverse_frame_2 - 4.1e-06 26.7 25.3 4.1e-06 26.7 25.3 3.2 5 1 0 5 5 5 1 Ribosomal protein L41 DUF3116 PF11313.8 NODE_51759_length_348_cov_353.111821_g43845_i0reverse_frame_3 - 0.12 12.2 0.2 0.18 11.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) Arena_glycoprot PF00798.18 NODE_51759_length_348_cov_353.111821_g43845_i0reverse_frame_2 - 0.69 8.5 4.5 0.73 8.4 4.5 1.1 1 0 0 1 1 1 0 Arenavirus glycoprotein Wzy_C PF04932.15 NODE_51757_length_348_cov_9631.597444_g43843_i0reverse_frame_2 - 0.045 13.4 0.0 0.052 13.2 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase Glyco_hydro_49 PF03718.13 ORF99949 - 5.5e-07 29.6 0.0 7.1e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 49 MFS_Mycoplasma PF07672.13 ORF99363 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF99363 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF99363 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF99363 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF99363 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF99363 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF99363 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF99363 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) Ribosomal_L19 PF01245.20 ORF98777 - 4.9e-47 158.5 1.5 5.4e-47 158.3 1.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L19 Snf7 PF03357.21 ORF97998 - 6.6e-08 32.3 14.6 7.7e-08 32.1 14.6 1.0 1 0 0 1 1 1 1 Snf7 DUF3287 PF11690.8 ORF97998 - 0.012 15.4 1.0 0.019 14.7 1.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3287) TBCC_N PF16752.5 ORF97998 - 0.049 14.1 7.3 0.44 11.0 2.4 2.3 1 1 1 2 2 2 0 Tubulin-specific chaperone C N-terminal domain Enkurin PF13864.6 ORF97998 - 0.056 13.9 7.9 0.26 11.8 7.9 1.9 1 1 0 1 1 1 0 Calmodulin-binding OSCP PF00213.18 ORF97998 - 0.074 13.2 3.0 0.086 13.0 3.0 1.2 1 0 0 1 1 1 0 ATP synthase delta (OSCP) subunit CorA PF01544.18 ORF97998 - 0.12 11.6 2.7 0.089 12.1 0.7 1.7 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein DUF2252 PF10009.9 ORF97998 - 0.37 9.8 3.1 0.41 9.7 3.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) CREPT PF16566.5 ORF97998 - 0.38 10.9 6.9 0.12 12.5 1.3 2.0 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Arc_PepC_II PF06847.11 ORF97998 - 1.8 9.1 4.6 9.2 6.9 0.6 2.2 1 1 1 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II OmpH PF03938.14 ORF97998 - 1.9 8.8 13.2 3.5 7.9 13.2 1.5 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) RNA_pol_3_Rpc31 PF11705.8 ORF97903 - 0.03 14.6 11.8 0.033 14.4 11.8 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 NOA36 PF06524.12 ORF97903 - 2.5 7.3 15.3 2.9 7.1 15.3 1.1 1 0 0 1 1 1 0 NOA36 protein cNMP_binding PF00027.29 ORF97460 - 0.0021 18.1 0.0 0.0031 17.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Sigma70_r1_1 PF03979.14 ORF97269 - 0.032 14.3 0.5 0.032 14.3 0.5 2.0 1 1 1 2 2 2 0 Sigma-70 factor, region 1.1 VIT PF08487.10 ORF97269 - 0.11 12.7 1.6 0.2 11.9 1.1 1.6 2 0 0 2 2 2 0 Vault protein inter-alpha-trypsin domain DUF1970 PF09301.10 ORF96519 - 0.015 15.5 0.3 0.02 15.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1970) CBM_19 PF03427.13 ORF96519 - 0.87 9.6 7.2 3.1 7.8 0.1 2.4 2 0 0 2 2 2 0 Carbohydrate binding domain (family 19) Rotamase PF00639.21 ORF96203 - 6.6e-27 94.3 0.1 7.6e-27 94.1 0.1 1.0 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF96203 - 8.8e-22 77.8 0.0 1e-21 77.7 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF96203 - 7.5e-07 30.0 0.0 8.7e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain SesA PF17107.5 ORF96203 - 0.071 13.3 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Mdv1 PF11542.8 ORF95872 - 0.1 12.6 0.1 9.1 6.3 0.0 2.3 1 1 1 2 2 2 0 Mitochondrial division protein 1 Imm47 PF15573.6 ORF95872 - 0.24 10.9 0.0 0.25 10.8 0.0 1.0 1 0 0 1 1 1 0 Immunity protein 47 Gp-FAR-1 PF05823.12 ORF95702 - 0.013 15.9 1.3 0.013 15.9 1.3 1.6 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DAG1 PF05454.11 ORF95380 - 0.15 11.4 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) DUF202 PF02656.15 ORF95175 - 3e-16 59.6 6.0 1.4e-15 57.5 1.7 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF202) DUF1129 PF06570.11 ORF95175 - 0.00011 21.7 0.2 0.00013 21.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) NMN_transporter PF04973.12 ORF95175 - 0.0018 18.3 0.4 0.0027 17.7 0.2 1.3 1 1 0 1 1 1 1 Nicotinamide mononucleotide transporter DUF2627 PF11118.8 ORF95175 - 0.0051 17.4 1.5 0.14 12.7 0.9 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2627) Chordopox_A13L PF05961.11 ORF95175 - 8.9 6.6 8.2 59 4.0 7.8 2.0 2 0 0 2 2 2 0 Chordopoxvirus A13L protein MPTase-PolyVal PF18818.1 ORF93793 - 0.00023 21.2 0.7 0.00023 21.2 0.0 1.4 2 0 0 2 2 2 1 Metallopeptidase superfamily domain DUF3679 PF12438.8 ORF93043 - 0.13 12.0 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3679) ARGLU PF15346.6 ORF92921 - 0.013 15.4 16.8 0.016 15.1 16.8 1.2 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 Exonuc_VII_L PF02601.15 ORF92921 - 0.027 14.0 8.5 0.03 13.9 8.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit HlyD_2 PF12700.7 ORF92921 - 0.094 11.4 2.8 0.1 11.3 2.8 1.1 1 0 0 1 1 1 0 HlyD family secretion protein Sds3 PF08598.11 ORF92921 - 0.18 11.8 6.1 0.21 11.5 6.1 1.1 1 0 0 1 1 1 0 Sds3-like HNOBA PF07701.14 ORF92921 - 2.3 7.6 5.8 1.6 8.1 0.0 2.3 1 1 1 2 2 2 0 Heme NO binding associated DUF1690 PF07956.11 ORF92921 - 2.6 8.5 12.8 5.2 7.5 12.7 1.5 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF3619 PF12279.8 ORF92921 - 3.5 8.0 10.8 9.7 6.5 9.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3619) Herpes_UL25 PF01499.16 ORF92921 - 6 5.3 9.3 6.9 5.1 9.3 1.1 1 0 0 1 1 1 0 Herpesvirus UL25 family HSCB_C PF07743.13 ORF92921 - 8.1 7.0 22.5 7.5 7.1 3.4 3.1 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain DSS1_SEM1 PF05160.13 ORF92834 - 0.00073 19.6 3.9 0.0012 18.8 3.9 1.4 1 0 0 1 1 1 1 DSS1/SEM1 family Sigma70_ner PF04546.13 ORF92834 - 0.015 15.2 2.6 0.018 14.9 2.6 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region GNAT_acetyltr_2 PF13718.6 ORF92834 - 0.14 11.6 0.9 0.17 11.2 0.9 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase 2 TarH PF02203.15 ORF92196 - 0.02 14.8 0.5 0.028 14.4 0.5 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue DUF1189 PF06691.11 ORF91769 - 1.2 8.7 5.2 1.3 8.6 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) zinc_ribbon_6 PF14599.6 ORF91471 - 1.5e-21 76.1 1.2 1.5e-21 76.1 1.2 2.1 2 0 0 2 2 2 1 Zinc-ribbon zf-RING_2 PF13639.6 ORF91471 - 6.3e-11 42.4 14.9 1.1e-09 38.5 5.0 2.2 2 0 0 2 2 2 2 Ring finger domain zf-RING_5 PF14634.6 ORF91471 - 3.1e-10 39.8 13.7 6.3e-09 35.7 4.2 2.3 2 0 0 2 2 2 2 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF91471 - 5.6e-10 39.1 1.4 5.6e-10 39.1 1.4 3.3 2 1 1 3 3 3 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF91471 - 1.5e-08 34.3 12.3 4.1e-06 26.5 3.1 2.4 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF91471 - 7e-07 29.0 4.4 7e-07 29.0 4.4 2.7 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF91471 - 8.2e-06 25.6 16.3 0.0033 17.3 6.8 3.1 2 1 0 2 2 2 2 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF91471 - 1e-05 25.5 15.4 2e-05 24.7 2.6 2.7 2 2 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_11 PF17123.5 ORF91471 - 3e-05 23.6 2.3 3e-05 23.6 2.3 2.8 3 0 0 3 3 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF91471 - 3.1e-05 23.7 8.1 3.1e-05 23.7 8.1 3.1 2 2 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF91471 - 0.00067 19.4 1.4 0.00067 19.4 1.4 2.5 2 1 0 2 2 2 1 RING/Ubox like zinc-binding domain Prok-RING_1 PF14446.6 ORF91471 - 0.0061 16.5 11.0 0.021 14.8 0.2 3.8 3 1 1 4 4 4 1 Prokaryotic RING finger family 1 zf-rbx1 PF12678.7 ORF91471 - 0.022 15.0 6.7 0.022 15.0 6.7 3.4 2 2 0 2 2 2 0 RING-H2 zinc finger domain Rtf2 PF04641.12 ORF91471 - 0.023 14.1 2.7 0.028 13.8 2.7 1.4 1 1 0 1 1 1 0 Rtf2 RING-finger PHD PF00628.29 ORF91471 - 0.026 14.4 2.4 0.026 14.4 2.4 3.0 2 1 0 3 3 3 0 PHD-finger zf-C2H2_9 PF16293.5 ORF91471 - 0.03 14.2 2.4 1.9 8.4 0.0 3.2 3 0 0 3 3 3 0 C2H2 type zinc-finger (1 copy) Zn-C2H2_12 PF18112.1 ORF91471 - 0.076 13.5 8.8 17 6.0 0.1 3.6 3 0 0 3 3 3 0 Autophagy receptor zinc finger-C2H2 domain Zf_RING PF16744.5 ORF91471 - 0.16 12.1 0.5 0.16 12.1 0.5 2.8 1 1 1 3 3 3 0 KIAA1045 RING finger TF_Zn_Ribbon PF08271.12 ORF91471 - 0.31 10.6 8.6 11 5.6 0.3 4.2 4 0 0 4 4 4 0 TFIIB zinc-binding Rad50_zn_hook PF04423.14 ORF91471 - 0.34 10.8 7.6 8.8 6.3 0.2 3.4 3 0 0 3 3 3 0 Rad50 zinc hook motif DUF35_N PF12172.8 ORF91471 - 0.45 10.4 0.1 0.45 10.4 0.1 3.0 4 1 1 5 5 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Rubredoxin_2 PF18073.1 ORF91471 - 0.65 9.8 0.0 0.65 9.8 0.0 4.4 5 0 0 5 5 5 0 Rubredoxin metal binding domain Auto_anti-p27 PF06677.12 ORF91471 - 1.2 9.4 9.4 12 6.1 0.0 3.9 4 0 0 4 4 4 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C2H2_4 PF13894.6 ORF91471 - 1.5 9.9 10.4 41 5.4 0.1 4.4 4 0 0 4 4 4 0 C2H2-type zinc finger DNA_ligase_ZBD PF03119.16 ORF91471 - 1.8 8.7 9.9 15 5.7 0.4 3.6 4 0 0 4 4 3 0 NAD-dependent DNA ligase C4 zinc finger domain C1_1 PF00130.22 ORF91471 - 4.6 7.2 13.1 0.6 10.0 1.2 3.2 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF1272 PF06906.11 ORF91471 - 6.9 6.9 12.9 0.54 10.4 2.5 2.9 2 2 0 2 2 2 0 Protein of unknown function (DUF1272) Zn_ribbon_17 PF17120.5 ORF91471 - 9 6.0 14.8 0.062 12.9 2.8 3.1 2 2 1 3 3 3 0 Zinc-ribbon, C4HC2 type Keratin_B2 PF01500.17 ORF91362 - 0.0023 18.0 6.5 0.0029 17.6 6.5 1.2 1 0 0 1 1 1 1 Keratin, high sulfur B2 protein eIF2A PF08662.11 ORF91346 - 0.021 14.7 0.1 0.024 14.5 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A DUF1690 PF07956.11 ORF91346 - 0.025 15.0 1.0 0.029 14.8 1.0 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) Phage_Mu_Gam PF07352.12 ORF88892 - 0.007 16.3 6.4 0.0083 16.0 6.4 1.2 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein TFIID-31kDa PF02291.15 ORF88892 - 0.011 15.9 0.9 0.012 15.7 0.9 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit O-antigen_lig PF13425.6 ORF88892 - 5.5 5.7 8.6 5.8 5.6 8.6 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Glyco_hydro_39 PF01229.17 ORF87487 - 0.14 10.7 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 39 Mo25 PF08569.11 ORF86648 - 0.041 13.2 1.7 0.045 13.1 1.7 1.0 1 0 0 1 1 1 0 Mo25-like Phage_sheath_1C PF17482.2 ORF86468 - 0.096 12.7 3.1 0.13 12.2 2.5 1.6 1 1 1 2 2 2 0 Phage tail sheath C-terminal domain Paramyxo_P PF01806.17 ORF86370 - 0.061 12.7 0.6 0.069 12.6 0.6 1.2 1 0 0 1 1 1 0 Paramyxovirinae P phosphoprotein C-terminal region SDP_N PF12278.8 ORF86370 - 0.32 11.1 2.4 0.41 10.8 2.4 1.1 1 0 0 1 1 1 0 Sex determination protein N terminal BUD22 PF09073.10 ORF85560 - 0.087 12.1 8.5 0.12 11.8 8.5 1.1 1 0 0 1 1 1 0 BUD22 CDC45 PF02724.14 ORF85560 - 0.66 8.2 4.6 0.7 8.1 4.6 1.0 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF85560 - 2 6.4 14.4 2.1 6.4 14.4 1.1 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 ORF85560 - 4.2 5.5 8.6 4.3 5.4 8.6 1.0 1 0 0 1 1 1 0 Nop14-like family AhpC-TSA PF00578.21 ORF85418 - 1e-23 83.5 0.0 1.3e-23 83.2 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF85418 - 4.4e-14 52.4 0.0 5.1e-14 52.2 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 ORF85418 - 1.5e-05 25.1 0.0 4e-05 23.7 0.0 1.4 1 1 0 2 2 2 1 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 ORF85418 - 0.0014 18.3 0.0 0.0015 18.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF899) CS PF04969.16 ORF85331 - 7.7e-13 49.3 0.2 9.8e-13 48.9 0.2 1.1 1 0 0 1 1 1 1 CS domain Mt_ATP-synt_D PF05873.12 ORF85180 - 0.0064 16.3 0.7 0.0088 15.9 0.5 1.3 1 1 0 1 1 1 1 ATP synthase D chain, mitochondrial (ATP5H) FCH PF00611.23 ORF85180 - 0.0068 16.7 0.0 0.0086 16.3 0.0 1.3 1 0 0 1 1 1 1 Fes/CIP4, and EFC/F-BAR homology domain NADH-UOR_E PF16514.5 ORF85180 - 0.02 15.2 0.8 0.04 14.2 0.4 1.7 1 1 1 2 2 2 0 putative NADH-ubiquinone oxidoreductase chain E MSA-2c PF12238.8 ORF85180 - 0.065 13.2 0.9 0.076 13.0 0.9 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF268 PF03269.14 ORF85180 - 0.068 13.0 0.2 0.16 11.8 0.1 1.6 1 1 1 2 2 2 0 Caenorhabditis protein of unknown function, DUF268 SHIPPO-rpt PF07004.12 ORF84417 - 0.023 15.6 4.3 28 5.8 0.1 3.4 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat Pkinase PF00069.25 ORF84121 - 1e-23 84.1 0.3 1.1e-23 83.9 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF84121 - 3.1e-16 59.4 0.1 3.4e-16 59.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF84121 - 0.0022 17.0 0.1 0.0023 16.9 0.1 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF84121 - 0.003 16.9 0.0 0.0035 16.7 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF84121 - 0.024 14.0 0.0 0.026 13.9 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Antimicrobial19 PF08225.11 ORF84121 - 0.32 10.6 0.1 0.32 10.6 0.1 2.1 2 0 0 2 2 2 0 Pseudin antimicrobial peptide Pkinase PF00069.25 ORF83632 - 0.00029 20.3 0.0 0.00036 20.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83632 - 0.014 14.7 0.0 0.019 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase Stomoxyn PF11585.8 ORF83570 - 0.023 14.7 0.2 0.081 13.0 0.2 2.0 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn EcsC PF12787.7 ORF83570 - 0.15 11.7 7.3 0.18 11.5 7.3 1.1 1 0 0 1 1 1 0 EcsC protein family CENP-N PF05238.13 ORF83570 - 0.21 10.9 11.0 0.28 10.5 11.0 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Sox_N PF12444.8 ORF83570 - 1.9 9.6 7.1 0.63 11.2 3.0 1.9 2 0 0 2 2 2 0 Sox developmental protein N terminal ICA69 PF04629.14 ORF83570 - 2.7 8.2 11.1 3.2 8.0 11.1 1.0 1 0 0 1 1 1 0 Islet cell autoantigen ICA69, C-terminal domain DUF1580 PF07618.11 ORF83034 - 0.22 11.2 3.0 5.6 6.7 0.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1580) Arf PF00025.21 ORF82782 - 3.5e-29 101.5 0.0 3.8e-29 101.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF82782 - 0.002 17.6 0.0 0.0024 17.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF82782 - 0.0078 15.8 0.0 0.0078 15.8 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF82782 - 0.044 14.0 0.0 0.057 13.6 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Kinesin PF00225.23 ORF817 - 8.8e-25 87.3 0.2 9.7e-25 87.2 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF817 - 2.2e-16 60.1 0.0 2.5e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 Microtubule binding GH43_C2 PF17851.1 ORF817 - 0.069 12.9 0.1 0.079 12.7 0.1 1.1 1 0 0 1 1 1 0 Beta xylosidase C-terminal Concanavalin A-like domain ABM PF03992.16 ORF8147 - 4.4e-13 49.1 0.2 5.6e-13 48.8 0.2 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase SOR PF07682.11 ORF8147 - 0.036 13.0 0.3 2.2 7.1 0.0 2.0 1 1 1 2 2 2 0 Sulphur oxygenase reductase DUF1330 PF07045.11 ORF8147 - 0.14 12.5 0.0 0.18 12.1 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1330) Glyco_transf_18 PF15024.6 ORF80133 - 0.047 12.3 0.6 0.053 12.1 0.6 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Amb_V_allergen PF03913.13 ORF80133 - 0.095 12.7 1.1 0.095 12.7 1.1 2.7 3 0 0 3 3 3 0 Amb V Allergen Sep15_SelM PF08806.11 ORF79728 - 0.067 13.4 0.5 0.12 12.6 0.5 1.4 1 0 0 1 1 1 0 Sep15/SelM redox domain MFS_Mycoplasma PF07672.13 ORF78366 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF78366 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF78366 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF78366 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF78366 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF78366 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF78366 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF78366 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) Spore_II_R PF09551.10 ORF78242 - 0.051 14.0 1.9 0.066 13.7 1.9 1.3 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) Tuberin PF03542.16 ORF77921 - 0.014 14.5 0.0 0.014 14.5 0.0 1.1 1 0 0 1 1 1 0 Tuberin RAP1 PF07218.11 ORF77861 - 0.93 7.7 3.8 1 7.5 3.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Neuralized PF07177.12 ORF76852 - 6.9e-05 22.9 0.0 8.5e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Neuralized cNMP_binding PF00027.29 ORF768 - 9.6e-05 22.4 0.0 0.00016 21.6 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF3973 PF13119.6 ORF768 - 0.11 12.6 0.2 0.31 11.2 0.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) DUF4064 PF13273.6 ORF76691 - 0.044 14.1 0.0 0.064 13.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) PIF1 PF05970.14 ORF76645 - 0.15 11.2 0.1 0.17 11.0 0.1 1.1 1 0 0 1 1 1 0 PIF1-like helicase MFS_Mycoplasma PF07672.13 ORF75835 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF75835 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF75835 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF75835 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF75835 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF75835 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF75835 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF75835 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) DUF4209 PF13910.6 ORF75612 - 0.17 12.1 0.1 0.33 11.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4209) ALG3 PF05208.13 ORF7522 - 3.6e-14 52.9 1.8 3.9e-14 52.9 1.8 1.0 1 0 0 1 1 1 1 ALG3 protein Pkinase PF00069.25 ORF74162 - 1.7e-27 96.5 0.8 1.8e-27 96.4 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF74162 - 3.3e-19 69.2 0.2 3.8e-19 69.0 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF74162 - 0.05 13.5 0.1 1.3 8.9 0.3 2.0 1 1 1 2 2 2 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF74162 - 0.074 12.7 0.2 0.1 12.2 0.2 1.3 1 1 0 1 1 1 0 RIO1 family p450 PF00067.22 ORF74151 - 6.7e-13 48.2 0.0 7.6e-13 48.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Spo0A_C PF08769.11 ORF74151 - 0.037 14.1 0.1 0.055 13.6 0.1 1.2 1 0 0 1 1 1 0 Sporulation initiation factor Spo0A C terminal RAB3GAP2_N PF14655.6 ORF7329 - 0.053 12.8 0.5 0.054 12.8 0.5 1.0 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit N-terminus GBP_C PF02841.14 ORF72939 - 2.7e-16 59.8 0.0 3.1e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, C-terminal domain PipA PF07108.11 ORF72939 - 0.041 13.4 0.0 0.047 13.2 0.0 1.1 1 0 0 1 1 1 0 PipA protein ABC_tran PF00005.27 ORF70946 - 4e-09 37.1 0.1 7.3e-09 36.3 0.0 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF70946 - 0.00016 21.2 0.3 0.00018 21.0 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain MFS_Mycoplasma PF07672.13 ORF70432 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF70432 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF70432 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF70432 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF70432 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF70432 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF70432 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF70432 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) DUF1161 PF06649.12 ORF69229 - 6.1e-22 77.6 0.0 7.9e-22 77.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1161) Retro_M PF02813.14 ORF69229 - 0.043 14.2 0.1 0.057 13.8 0.1 1.2 1 0 0 1 1 1 0 Retroviral M domain Glyco_transf_18 PF15024.6 ORF69216 - 0.047 12.3 0.6 0.053 12.1 0.6 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Amb_V_allergen PF03913.13 ORF69216 - 0.095 12.7 1.1 0.095 12.7 1.1 2.7 3 0 0 3 3 3 0 Amb V Allergen PaaA_PaaC PF05138.12 ORF68919 - 0.044 12.9 0.0 0.052 12.7 0.0 1.1 1 0 0 1 1 1 0 Phenylacetic acid catabolic protein FANCI_HD2 PF14680.6 ORF68919 - 0.052 12.8 0.1 0.064 12.5 0.1 1.1 1 0 0 1 1 1 0 FANCI helical domain 2 DUF3619 PF12279.8 ORF6868 - 0.06 13.7 0.3 0.06 13.7 0.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3619) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks203.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks203.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks203.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks203.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribonuc_L-PSP PF01042.21 ORF68675 - 1.6e-28 99.1 0.4 1.8e-28 99.0 0.4 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP AAA_29 PF13555.6 ORF68675 - 0.075 12.8 0.1 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain stn_TNFRSF12A PF12191.8 ORF6821 - 0.049 13.9 3.1 0.074 13.3 1.0 2.0 1 1 1 2 2 2 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain Band_7 PF01145.25 ORF68172 - 2.9e-07 30.7 2.3 3.8e-07 30.3 2.3 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 ORF68172 - 6.1e-05 22.8 0.2 9.6e-05 22.2 0.2 1.3 1 0 0 1 1 1 1 SPFH domain-Band 7 family zf-ANAPC11 PF12861.7 ORF66753 - 0.16 12.0 0.5 0.25 11.4 0.5 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger NADH-G_4Fe-4S_3 PF10588.9 ORF66753 - 0.17 11.5 0.4 0.27 10.8 0.4 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF3600 PF12207.8 ORF65786 - 0.038 13.9 2.6 0.045 13.7 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3600) ArAE_1_C PF11728.8 ORF65062 - 0.013 15.5 1.2 0.019 15.0 0.9 1.5 1 1 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain DUF1359 PF07097.11 ORF65062 - 0.035 14.4 2.5 0.46 10.8 2.5 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1359) DUF1043 PF06295.12 ORF65062 - 0.04 13.9 0.1 0.043 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) RPA_interact_M PF14767.6 ORF65062 - 2.1 9.0 6.4 8.5 7.0 6.4 2.0 1 1 0 1 1 1 0 Replication protein A interacting middle DUF1598 PF07643.11 ORF63729 - 0.1 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1598) GyrI-like PF06445.15 ORF6336 - 3.3e-08 34.0 0.1 3.9e-08 33.8 0.1 1.1 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 ORF6336 - 3.1e-05 24.2 0.1 3.2e-05 24.1 0.1 1.1 1 0 0 1 1 1 1 Integron-associated effector binding protein Pap_E4 PF02711.14 ORF62997 - 3.1 8.8 14.1 4.9 8.2 14.1 1.4 1 0 0 1 1 1 0 E4 protein EamA PF00892.20 ORF61359 - 1.8e-16 60.6 15.0 1.9e-16 60.4 15.0 1.0 1 0 0 1 1 1 1 EamA-like transporter family TatC PF00902.18 ORF61359 - 0.022 14.6 1.3 0.042 13.7 1.3 1.5 1 1 0 1 1 1 0 Sec-independent protein translocase protein (TatC) DUF4726 PF15855.5 ORF60848 - 0.17 12.1 0.1 0.32 11.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) Phage_Mu_Gam PF07352.12 ORF60401 - 0.007 16.3 6.4 0.0083 16.0 6.4 1.2 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein TFIID-31kDa PF02291.15 ORF60401 - 0.011 15.9 0.9 0.012 15.7 0.9 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit O-antigen_lig PF13425.6 ORF60401 - 5.5 5.7 8.6 5.8 5.6 8.6 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF4726 PF15855.5 ORF59012 - 0.17 12.1 0.1 0.32 11.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) Prismane PF03063.20 ORF58969 - 0.11 11.1 0.1 0.13 10.9 0.1 1.0 1 0 0 1 1 1 0 Prismane/CO dehydrogenase family Sugar_tr PF00083.24 ORF58560 - 4.6e-15 55.4 7.4 4.8e-15 55.4 7.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter GerPB PF10803.8 ORF58468 - 0.22 11.6 0.0 0.38 10.9 0.0 1.4 1 0 0 1 1 1 0 Spore germination GerPB Spore_II_R PF09551.10 ORF57331 - 0.051 14.0 1.9 0.066 13.7 1.9 1.3 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) Pkinase PF00069.25 ORF56056 - 1.7e-27 96.5 0.8 1.8e-27 96.4 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF56056 - 3.3e-19 69.2 0.2 3.8e-19 69.0 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF56056 - 0.05 13.5 0.1 1.3 8.9 0.3 2.0 1 1 1 2 2 2 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF56056 - 0.074 12.7 0.2 0.1 12.2 0.2 1.3 1 1 0 1 1 1 0 RIO1 family SPRY PF00622.28 ORF55801 - 0.015 15.5 0.0 0.019 15.1 0.0 1.2 1 0 0 1 1 1 0 SPRY domain BPD_transp_1 PF00528.22 ORF5569 - 0.0038 17.0 0.7 0.0038 17.0 0.7 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF2207 PF09972.9 ORF5569 - 0.024 13.4 1.5 0.028 13.2 1.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Pap_E4 PF02711.14 ORF5548 - 0.14 13.1 7.1 0.19 12.7 7.1 1.2 1 0 0 1 1 1 0 E4 protein FSA_C PF10479.9 ORF5548 - 0.34 9.0 9.7 0.38 8.8 9.7 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Med3 PF11593.8 ORF5548 - 0.73 9.0 8.4 0.77 8.9 8.4 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal MFMR_assoc PF16596.5 ORF55015 - 0.0088 16.5 3.4 0.012 16.1 3.4 1.1 1 0 0 1 1 1 1 Disordered region downstream of MFMR DUF3600 PF12207.8 ORF5499 - 0.038 13.9 2.6 0.045 13.7 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3600) DUF4880 PF16220.5 ORF54356 - 0.042 13.7 3.1 0.12 12.3 3.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4880) LIME1 PF15332.6 ORF53995 - 0.073 12.7 0.9 0.081 12.5 0.9 1.1 1 0 0 1 1 1 0 Lck-interacting transmembrane adapter 1 Amidase PF01425.21 ORF53326 - 0.16 10.9 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 Amidase MUG113 PF13455.6 ORF52956 - 0.079 13.7 0.9 0.13 12.9 0.9 1.5 1 1 0 1 1 1 0 Meiotically up-regulated gene 113 PIF1 PF05970.14 ORF52525 - 0.15 11.2 0.1 0.17 11.0 0.1 1.1 1 0 0 1 1 1 0 PIF1-like helicase Na_trans_assoc PF06512.13 ORF52447 - 0.026 14.8 5.3 0.03 14.6 5.3 1.1 1 0 0 1 1 1 0 Sodium ion transport-associated Nop14 PF04147.12 ORF52447 - 0.84 7.8 7.7 0.93 7.6 7.7 1.0 1 0 0 1 1 1 0 Nop14-like family DUF4834 PF16118.5 ORF52447 - 1.2 10.2 6.9 1 10.4 6.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DNA_pol_phi PF04931.13 ORF52447 - 9.1 4.2 8.1 10 4.0 8.1 1.1 1 0 0 1 1 1 0 DNA polymerase phi RNA_pol_L_2 PF13656.6 ORF51773 - 5.6e-23 80.5 0.1 7e-23 80.2 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 ORF51773 - 8.4e-07 28.3 0.0 1.3e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain ISN1 PF06437.11 ORF50929 - 0.12 11.2 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 IMP-specific 5'-nucleotidase GerPB PF10803.8 ORF50225 - 0.22 11.6 0.0 0.38 10.9 0.0 1.4 1 0 0 1 1 1 0 Spore germination GerPB ECH_1 PF00378.20 ORF49484 - 3.4e-06 26.6 0.0 3.4e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF1481 PF07356.12 ORF49092 - 8.3e-41 139.8 1.8 9.3e-41 139.6 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1481) Got1 PF04178.12 ORF48738 - 5.1e-24 84.9 7.4 5.8e-24 84.7 7.4 1.0 1 0 0 1 1 1 1 Got1/Sft2-like family UPF0154 PF03672.13 ORF47050 - 0.19 11.8 5.5 0.26 11.3 0.3 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0154) EzrA PF06160.12 ORF46095 - 0.011 14.0 1.6 0.012 13.8 1.6 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA XRCC4 PF06632.12 ORF46095 - 0.028 13.3 1.6 0.037 12.9 1.6 1.3 1 1 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 ArdA PF07275.11 ORF46095 - 0.079 13.6 0.1 0.09 13.4 0.1 1.2 1 0 0 1 1 1 0 Antirestriction protein (ArdA) Steroid_dh PF02544.16 ORF45188 - 7.1e-42 142.9 0.0 7.7e-42 142.8 0.0 1.0 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase DUF1295 PF06966.12 ORF45188 - 9.6e-07 28.6 0.1 1.2e-06 28.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Phage_integrase PF00589.22 ORF45057 - 6.9e-25 87.8 0.1 8.2e-25 87.6 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family Band_7 PF01145.25 ORF44908 - 2.9e-07 30.7 2.3 3.8e-07 30.3 2.3 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 ORF44908 - 6.1e-05 22.8 0.2 9.6e-05 22.2 0.2 1.3 1 0 0 1 1 1 1 SPFH domain-Band 7 family ATG27 PF09451.10 ORF43676 - 6.2e-06 26.3 0.1 7.5e-06 26.0 0.1 1.1 1 0 0 1 1 1 1 Autophagy-related protein 27 Tad PF13400.6 ORF43676 - 0.14 12.5 0.6 0.18 12.1 0.6 1.2 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like Phage_Mu_Gam PF07352.12 ORF42904 - 0.007 16.3 6.4 0.0083 16.0 6.4 1.2 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein TFIID-31kDa PF02291.15 ORF42904 - 0.011 15.9 0.9 0.012 15.7 0.9 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit O-antigen_lig PF13425.6 ORF42904 - 5.5 5.7 8.6 5.8 5.6 8.6 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Rot1 PF10681.9 ORF42316 - 0.11 12.0 0.7 0.11 12.0 0.7 1.1 1 0 0 1 1 1 0 Chaperone for protein-folding within the ER, fungal SET PF00856.28 ORF4007 - 0.00039 20.9 0.0 0.00049 20.5 0.0 1.2 1 0 0 1 1 1 1 SET domain BRE1 PF08647.11 ORF3952 - 0.065 13.3 2.4 0.09 12.9 2.4 1.3 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase SapB_1 PF05184.15 ORF3952 - 0.16 12.1 0.5 0.95 9.5 0.1 2.3 2 0 0 2 2 2 0 Saposin-like type B, region 1 RR_TM4-6 PF06459.12 ORF39230 - 0.016 15.1 18.5 0.018 14.9 18.5 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 T2SS_PulS_OutS PF09691.10 ORF3884 - 2e-09 37.6 0.0 2.5e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 Type II secretion system pilotin lipoprotein (PulS_OutS) Porin_8 PF16966.5 ORF3884 - 0.085 11.8 0.1 0.12 11.4 0.1 1.2 1 0 0 1 1 1 0 Porin-like glycoporin RafY DUF621 PF04789.15 ORF38686 - 0.023 13.9 8.8 0.026 13.7 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF621) DUF3959 PF13105.6 ORF38624 - 0.04 13.4 0.0 0.043 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Spidroin_N PF16763.5 ORF38624 - 0.17 11.9 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Major ampullate spidroin 1, spider silk protein 1, N-term FPP PF05911.11 ORF3853 - 0.041 12.1 1.0 0.047 11.9 1.0 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil tRNA-synt_2 PF00152.20 ORF38440 - 3.3e-25 88.8 0.0 3.6e-25 88.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF38440 - 0.089 12.3 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) mono-CXXC PF15626.6 ORF3785 - 0.043 14.2 1.7 0.078 13.3 1.7 1.5 1 0 0 1 1 1 0 single CXXC unit RRM_1 PF00076.22 ORF37740 - 0.0054 16.5 0.0 0.011 15.5 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) UBA_6 PF18039.1 ORF37740 - 0.068 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 UBA-like domain Leuk-A4-hydro_C PF09127.11 ORF37280 - 9.8e-05 22.4 0.0 0.00046 20.2 0.0 1.8 1 1 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal PK PF00224.21 ORF36841 - 6e-31 107.6 0.0 6.5e-31 107.5 0.0 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain UDPGT PF00201.18 ORF36721 - 6.6e-12 45.0 0.0 8e-12 44.7 0.0 1.0 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF36721 - 8.2e-05 22.6 0.0 0.0001 22.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF36721 - 0.1 11.8 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 Glutaredoxin PF00462.24 ORF35053 - 1.1e-18 67.1 0.0 1.9e-18 66.4 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin Glyco_transf_18 PF15024.6 ORF34991 - 0.047 12.3 0.6 0.053 12.1 0.6 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Amb_V_allergen PF03913.13 ORF34991 - 0.095 12.7 1.1 0.095 12.7 1.1 2.7 3 0 0 3 3 3 0 Amb V Allergen DUF1647 PF07801.11 ORF34657 - 0.00072 19.3 1.1 0.0013 18.5 1.3 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1647) GP17 PF17420.2 ORF34657 - 0.081 13.1 1.9 0.13 12.4 1.9 1.4 1 1 0 1 1 1 0 Superinfection exclusion gene product 17 MFMR_assoc PF16596.5 ORF33950 - 0.0088 16.5 3.4 0.012 16.1 3.4 1.1 1 0 0 1 1 1 1 Disordered region downstream of MFMR NAD_binding_8 PF13450.6 ORF32958 - 0.084 13.1 0.0 0.18 12.1 0.0 1.7 1 1 1 2 2 2 0 NAD(P)-binding Rossmann-like domain Cloacin PF03515.14 ORF32860 - 0.079 12.6 0.1 0.089 12.5 0.1 1.0 1 0 0 1 1 1 0 Colicin-like bacteriocin tRNase domain Terpene_synth PF01397.21 ORF32538 - 0.24 11.1 0.0 0.32 10.7 0.0 1.2 1 0 0 1 1 1 0 Terpene synthase, N-terminal domain Mso1_C PF14477.6 ORF31932 - 0.14 12.6 0.0 0.23 11.9 0.0 1.3 1 0 0 1 1 1 0 Membrane-polarising domain of Mso1 DUF1258 PF06869.12 ORF31731 - 0.11 12.0 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) DUF4726 PF15855.5 ORF31037 - 0.17 12.1 0.1 0.32 11.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) PX PF00787.24 ORF30711 - 7.1e-08 32.4 0.1 1e-07 31.9 0.1 1.2 1 0 0 1 1 1 1 PX domain Nse4-Nse3_bdg PF15412.6 ORF30711 - 0.15 12.2 0.0 1.3 9.2 0.0 2.2 2 0 0 2 2 2 0 Binding domain of Nse4/EID3 to Nse3-MAGE DUF4781 PF16013.5 ORF30602 - 0.14 11.0 3.1 0.16 10.7 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) Gp-FAR-1 PF05823.12 ORF29762 - 0.013 15.9 1.3 0.013 15.9 1.3 1.6 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Ribosomal_L22e PF01776.17 ORF28923 - 1.1e-46 157.7 0.9 1.3e-46 157.4 0.9 1.0 1 0 0 1 1 1 1 Ribosomal L22e protein family DUF2917 PF11142.8 ORF28742 - 0.0015 17.9 0.1 0.0027 17.1 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2917) HCO3_cotransp PF00955.21 ORF2825 - 0.048 12.5 0.0 0.055 12.3 0.0 1.1 1 0 0 1 1 1 0 HCO3- transporter family Glyco_transf_18 PF15024.6 ORF281 - 0.047 12.3 0.6 0.053 12.1 0.6 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Amb_V_allergen PF03913.13 ORF281 - 0.095 12.7 1.1 0.095 12.7 1.1 2.7 3 0 0 3 3 3 0 Amb V Allergen Phage_int_SAM_5 PF13102.6 ORF28044 - 0.0022 18.3 0.3 0.0033 17.7 0.2 1.3 1 1 0 1 1 1 1 Phage integrase SAM-like domain DUF4274 PF14096.6 ORF28044 - 0.031 14.2 0.2 0.099 12.6 0.2 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4274) CAF1C_H4-bd PF12265.8 ORF26829 - 0.22 11.8 0.2 5.1 7.4 0.1 2.2 2 0 0 2 2 2 0 Histone-binding protein RBBP4 or subunit C of CAF1 complex MFMR_assoc PF16596.5 ORF26262 - 0.0088 16.5 3.4 0.012 16.1 3.4 1.1 1 0 0 1 1 1 1 Disordered region downstream of MFMR PP2C PF00481.21 ORF26050 - 2.8e-08 33.7 0.0 3.4e-08 33.4 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF26050 - 5.1e-05 23.3 1.0 0.00014 21.9 0.2 1.7 1 1 1 2 2 2 1 Stage II sporulation protein E (SpoIIE) Tropomyosin_1 PF12718.7 ORF25753 - 0.028 14.5 0.1 0.044 14.0 0.1 1.2 1 0 0 1 1 1 0 Tropomyosin like TMF_DNA_bd PF12329.8 ORF25753 - 0.068 13.2 0.5 0.098 12.7 0.5 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF4140 PF13600.6 ORF25753 - 0.15 12.5 0.0 0.18 12.3 0.0 1.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Lactamase_B_2 PF12706.7 ORF25322 - 2.7e-07 30.3 0.0 2.8e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 ORF25322 - 4.3e-05 23.4 0.0 5.3e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 ORF25322 - 0.00024 21.2 0.1 0.00025 21.1 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily DUF3959 PF13105.6 ORF25311 - 0.04 13.4 0.0 0.043 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Spidroin_N PF16763.5 ORF25311 - 0.17 11.9 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Major ampullate spidroin 1, spider silk protein 1, N-term DUF1147 PF06615.11 ORF25087 - 0.028 14.4 0.5 3.8 7.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1147) zf-LITAF-like PF10601.9 ORF24972 - 1.7e-10 41.0 8.7 2.4e-10 40.5 8.7 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DZR PF12773.7 ORF24972 - 0.00083 19.3 6.8 0.0068 16.4 0.6 2.3 2 0 0 2 2 2 2 Double zinc ribbon zf-UDP PF14569.6 ORF24972 - 0.046 13.8 3.2 6.1 7.0 1.2 2.3 2 0 0 2 2 2 0 Zinc-binding RING-finger Mut7-C PF01927.16 ORF24972 - 0.059 13.5 2.0 0.072 13.2 2.0 1.2 1 0 0 1 1 1 0 Mut7-C RNAse domain zinc_ribbon_15 PF17032.5 ORF24972 - 0.067 14.0 9.6 14 6.6 10.1 2.4 1 1 1 2 2 2 0 zinc-ribbon family zinc-ribbons_6 PF07191.12 ORF24972 - 0.076 13.0 7.5 0.17 11.9 7.5 1.6 1 1 0 1 1 1 0 zinc-ribbons Ribosomal_L31 PF01197.18 ORF24972 - 0.077 13.2 0.4 0.077 13.2 0.4 1.8 3 0 0 3 3 3 0 Ribosomal protein L31 HNH_5 PF14279.6 ORF24972 - 0.11 12.4 6.6 0.57 10.1 0.1 2.5 2 1 0 2 2 2 0 HNH endonuclease zinc_ribbon_2 PF13240.6 ORF24972 - 0.2 11.4 0.4 0.2 11.4 0.4 2.7 2 1 0 2 2 2 0 zinc-ribbon domain eIF-5_eIF-2B PF01873.17 ORF24972 - 0.49 10.3 6.2 0.18 11.7 1.9 2.1 2 0 0 2 2 2 0 Domain found in IF2B/IF5 Tnp_zf-ribbon_2 PF13842.6 ORF24972 - 0.8 10.6 9.3 6.1 7.7 3.5 2.6 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon MORN PF02493.20 ORF2495 - 2e-19 68.2 43.4 1.9e-07 30.6 4.8 5.7 6 0 0 6 6 6 4 MORN repeat Tudor_2 PF18104.1 ORF2495 - 1.1e-06 28.2 9.8 0.37 10.5 0.1 4.5 3 1 1 4 4 4 4 Jumonji domain-containing protein 2A Tudor domain Caprin-1_C PF12287.8 ORF2495 - 0.7 10.0 2.4 0.88 9.7 2.4 1.2 1 0 0 1 1 1 0 Cytoplasmic activation/proliferation-associated protein-1 C term DUF1107 PF06526.12 ORF2495 - 3 7.8 6.9 3.5 7.6 0.5 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1107) EF-hand_6 PF13405.6 ORF24908 - 5.1e-05 22.9 0.1 0.00028 20.6 0.0 2.4 3 1 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF24908 - 0.0018 17.7 0.0 0.0065 15.9 0.0 2.0 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF24908 - 0.007 15.8 0.1 0.017 14.6 0.1 1.7 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF24908 - 0.048 13.5 0.2 0.6 10.0 0.1 2.6 2 1 0 2 2 2 0 EF-hand domain pair EF-hand_7 PF13499.6 ORF24908 - 0.1 13.1 0.1 0.12 12.8 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain pair Wyosine_form PF08608.12 ORF24326 - 0.046 14.1 0.1 0.071 13.5 0.1 1.2 1 0 0 1 1 1 0 Wyosine base formation Cyclin_N PF00134.23 ORF24277 - 1.8e-43 147.3 0.2 1.9e-43 147.2 0.2 1.0 1 0 0 1 1 1 1 Cyclin, N-terminal domain PI3_PI4_kinase PF00454.27 ORF2408 - 3.2e-27 95.9 0.0 3.6e-27 95.8 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 ORF2408 - 0.19 11.0 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) Pkinase PF00069.25 ORF23760 - 4.9e-06 26.1 0.0 5.5e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain PABP PF00658.18 ORF23760 - 0.086 13.0 0.0 0.16 12.1 0.0 1.6 1 1 0 1 1 1 0 Poly-adenylate binding protein, unique domain DsbG_N PF18257.1 ORF23087 - 0.011 15.8 0.1 0.019 15.1 0.1 1.3 1 0 0 1 1 1 0 Disulfide isomerase DsbG N-terminal DUF1681 PF07933.14 ORF23087 - 0.026 14.2 0.4 0.03 14.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) EF-hand_8 PF13833.6 ORF21363 - 1.6e-10 40.6 0.1 7.3e-08 32.1 0.1 2.8 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF21363 - 1.5e-08 33.9 0.0 0.00034 20.3 0.0 2.8 2 1 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF21363 - 2.3e-08 34.3 0.5 1.8e-05 25.1 0.0 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF21363 - 1e-07 31.0 6.3 5.5e-07 28.7 0.3 3.7 5 0 0 5 5 5 1 EF hand EF-hand_5 PF13202.6 ORF21363 - 0.00011 21.6 2.4 0.00068 19.0 0.4 2.9 3 0 0 3 3 3 1 EF hand EF-hand_4 PF12763.7 ORF21363 - 0.027 14.4 0.3 0.82 9.7 0.2 2.1 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Aldo_ket_red PF00248.21 ORF19764 - 1.2e-17 64.1 0.0 1.4e-17 63.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family DUF2200 PF09966.9 ORF19170 - 7.5e-37 125.9 0.0 8.4e-37 125.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2200) TPR_14 PF13428.6 ORF18960 - 3.1e-05 24.4 0.1 0.11 13.4 0.0 2.5 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF18960 - 0.0016 18.7 0.1 0.73 10.2 0.0 2.9 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF18960 - 0.0021 18.0 0.0 1.2 9.4 0.0 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat Foamy_BEL PF03274.14 ORF18960 - 0.0039 16.6 0.0 0.0048 16.3 0.0 1.1 1 0 0 1 1 1 1 Foamy virus BEL 1/2 protein TPR_17 PF13431.6 ORF18960 - 0.15 12.5 0.0 14 6.3 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat GerPB PF10803.8 ORF18908 - 0.22 11.6 0.0 0.38 10.9 0.0 1.4 1 0 0 1 1 1 0 Spore germination GerPB DUF3405 PF11885.8 ORF17917 - 0.024 13.3 0.0 0.026 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) Bcr-Abl_Oligo PF09036.10 ORF17894 - 0.018 15.0 1.1 0.066 13.2 0.5 2.0 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain DUF4947 PF16305.5 ORF17894 - 0.023 14.7 0.1 0.028 14.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4947) E1_dh PF00676.20 ORF17894 - 0.045 12.7 0.3 0.06 12.3 0.3 1.1 1 0 0 1 1 1 0 Dehydrogenase E1 component EHN PF06441.12 ORF17894 - 0.11 12.8 0.1 0.17 12.3 0.1 1.3 1 0 0 1 1 1 0 Epoxide hydrolase N terminus PP2C PF00481.21 ORF17746 - 4.3e-16 59.3 0.0 5e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF17746 - 0.0061 16.5 0.0 0.0071 16.3 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) DUF4283 PF14111.6 ORF17746 - 0.051 13.1 0.1 0.13 11.7 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4283) Phage_Mu_Gam PF07352.12 ORF1735 - 0.007 16.3 6.4 0.0083 16.0 6.4 1.2 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein TFIID-31kDa PF02291.15 ORF1735 - 0.011 15.9 0.9 0.012 15.7 0.9 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit O-antigen_lig PF13425.6 ORF1735 - 5.5 5.7 8.6 5.8 5.6 8.6 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein RRT14 PF17075.5 ORF1733 - 7 6.7 20.7 22 5.1 20.7 1.7 1 1 0 1 1 1 0 Regular of rDNA transcription protein 14 DUF2632 PF10943.8 ORF17188 - 0.078 12.6 0.4 0.091 12.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2632) MFS_Mycoplasma PF07672.13 ORF17158 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF17158 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF17158 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF17158 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF17158 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF17158 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF17158 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF17158 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) Oest_recep PF02159.15 ORF15863 - 0.075 13.5 5.1 0.097 13.2 5.1 1.3 1 0 0 1 1 1 0 Oestrogen receptor V-ATPase_G PF03179.15 ORF15823 - 4.9e-21 75.2 18.7 5.5e-21 75.1 18.7 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit GA PF01468.17 ORF15823 - 0.0052 17.0 3.7 0.066 13.5 2.7 2.3 1 1 1 2 2 2 1 GA module Mod_r PF07200.13 ORF15823 - 0.0059 16.7 14.7 0.0074 16.4 14.7 1.1 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein JMY PF15871.5 ORF15823 - 0.008 15.5 9.2 0.009 15.3 9.2 1.1 1 0 0 1 1 1 1 Junction-mediating and -regulatory protein DUF1640 PF07798.11 ORF15823 - 0.0081 16.2 7.3 0.011 15.8 7.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) OmpH PF03938.14 ORF15823 - 0.061 13.7 18.0 0.076 13.4 18.0 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) FPRL1_inhibitor PF16104.5 ORF15823 - 0.09 12.9 3.5 2 8.6 0.1 2.1 1 1 0 2 2 2 0 Formyl peptide receptor-like 1 inhibitory protein UPF0242 PF06785.11 ORF15823 - 0.12 12.5 13.1 0.14 12.3 13.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus zf-CpG_bind_C PF12269.8 ORF15823 - 0.14 12.0 7.7 0.15 11.8 7.7 1.0 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain ATP-synt_B PF00430.18 ORF15823 - 0.14 12.3 20.4 0.4 10.8 20.4 1.7 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) DUF4047 PF13256.6 ORF15823 - 0.14 12.4 12.6 0.2 11.8 12.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4047) DUF4736 PF15883.5 ORF15823 - 0.16 11.7 6.0 0.18 11.5 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) DUF3450 PF11932.8 ORF15823 - 0.17 11.1 12.3 0.2 10.9 12.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF3552 PF12072.8 ORF15823 - 0.24 10.8 21.0 1.1 8.6 21.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF2937 PF11157.8 ORF15823 - 0.24 11.1 2.0 0.35 10.6 2.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2937) Prominin PF05478.11 ORF15823 - 0.27 9.2 8.5 0.3 9.0 8.5 1.0 1 0 0 1 1 1 0 Prominin V-ATPase_G_2 PF16999.5 ORF15823 - 0.4 11.1 19.1 1.3 9.5 19.1 1.7 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit Mt_ATP-synt_B PF05405.14 ORF15823 - 0.4 10.3 16.1 0.52 9.9 1.6 2.0 1 1 1 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) FliD_N PF02465.18 ORF15823 - 0.45 11.3 4.9 0.95 10.2 4.9 1.8 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus KIP1 PF07765.12 ORF15823 - 0.48 10.6 10.8 0.11 12.6 6.0 1.9 1 1 1 2 2 2 0 KIP1-like protein DUF1664 PF07889.12 ORF15823 - 0.51 10.4 8.5 0.94 9.5 8.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) CENP-I PF07778.11 ORF15823 - 0.61 8.7 6.5 0.73 8.5 6.5 1.0 1 0 0 1 1 1 0 Mis6 DUF724 PF05266.14 ORF15823 - 0.65 9.8 13.3 0.71 9.7 13.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) CCAP PF11105.8 ORF15823 - 1.1 9.2 8.7 0.16 11.9 3.6 2.0 1 1 1 2 2 2 0 Arthropod cardioacceleratory peptide 2a HAUS6_N PF14661.6 ORF15823 - 1.8 8.1 10.6 2.2 7.8 10.6 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF883 PF05957.13 ORF15823 - 2.2 9.0 7.8 26 5.5 7.8 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CemA PF03040.14 ORF15823 - 2.3 8.1 7.6 2.6 7.9 7.6 1.1 1 0 0 1 1 1 0 CemA family DUF4407 PF14362.6 ORF15823 - 2.7 7.3 8.9 3 7.1 8.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) KfrA_N PF11740.8 ORF15823 - 5.8 7.6 15.6 1.3 9.7 6.1 2.1 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term TMPIT PF07851.13 ORF15823 - 6.5 5.9 8.6 6.7 5.9 8.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein ALG3 PF05208.13 ORF15443 - 2.3e-10 40.5 2.6 2.6e-10 40.3 2.6 1.0 1 0 0 1 1 1 1 ALG3 protein Phage_Mu_Gam PF07352.12 ORF14886 - 0.007 16.3 6.4 0.0083 16.0 6.4 1.2 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein TFIID-31kDa PF02291.15 ORF14886 - 0.011 15.9 0.9 0.012 15.7 0.9 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit O-antigen_lig PF13425.6 ORF14886 - 5.5 5.7 8.6 5.8 5.6 8.6 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Rot1 PF10681.9 ORF14619 - 0.11 12.0 0.7 0.11 12.0 0.7 1.1 1 0 0 1 1 1 0 Chaperone for protein-folding within the ER, fungal MFS_Mycoplasma PF07672.13 ORF14460 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF14460 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF14460 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF14460 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF14460 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF14460 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF14460 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF14460 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) Aldo_ket_red PF00248.21 ORF13956 - 1.2e-17 64.1 0.0 1.4e-17 63.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family GerPB PF10803.8 ORF13903 - 0.22 11.6 0.0 0.38 10.9 0.0 1.4 1 0 0 1 1 1 0 Spore germination GerPB DUF2722 PF10846.8 ORF13607 - 0.034 13.1 16.5 0.039 12.9 16.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) RR_TM4-6 PF06459.12 ORF13607 - 0.71 9.6 16.7 0.76 9.5 16.7 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 LptF_LptG PF03739.14 ORF13607 - 0.78 8.5 3.4 0.99 8.2 3.4 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG PDDEXK_6 PF04720.12 ORF13607 - 0.98 9.3 12.6 1.1 9.2 12.6 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function SDA1 PF05285.12 ORF13607 - 1.5 8.2 23.2 1.6 8.1 23.2 1.1 1 0 0 1 1 1 0 SDA1 Tim54 PF11711.8 ORF13607 - 2.3 6.9 13.3 2.3 6.9 13.3 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 CSG2 PF16965.5 ORF13607 - 2.3 7.1 5.2 2.6 6.9 5.2 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator TRAP_alpha PF03896.16 ORF13607 - 2.4 7.3 12.7 3.1 6.9 12.7 1.3 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit NPR3 PF03666.13 ORF13607 - 4.1 6.1 15.8 4.2 6.1 15.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Nop14 PF04147.12 ORF13607 - 4.7 5.3 23.1 4.7 5.3 23.1 1.1 1 0 0 1 1 1 0 Nop14-like family CLN3 PF02487.17 ORF13607 - 5.2 6.0 8.1 5.8 5.8 8.1 1.1 1 0 0 1 1 1 0 CLN3 protein AAA_11 PF13086.6 ORF13607 - 5.9 6.6 13.7 6 6.6 13.7 1.2 1 0 0 1 1 1 0 AAA domain Pox_Ag35 PF03286.14 ORF13607 - 5.9 6.6 18.9 7.4 6.3 18.9 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Zip PF02535.22 ORF13607 - 6.8 5.8 11.7 6.9 5.8 11.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Phage_Mu_Gam PF07352.12 ORF1340 - 0.007 16.3 6.4 0.0083 16.0 6.4 1.2 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein TFIID-31kDa PF02291.15 ORF1340 - 0.011 15.9 0.9 0.012 15.7 0.9 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit O-antigen_lig PF13425.6 ORF1340 - 5.5 5.7 8.6 5.8 5.6 8.6 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Oest_recep PF02159.15 ORF13117 - 0.075 13.5 5.1 0.097 13.2 5.1 1.3 1 0 0 1 1 1 0 Oestrogen receptor Phage_Mu_Gam PF07352.12 ORF12105 - 0.007 16.3 6.4 0.0083 16.0 6.4 1.2 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein TFIID-31kDa PF02291.15 ORF12105 - 0.011 15.9 0.9 0.012 15.7 0.9 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit O-antigen_lig PF13425.6 ORF12105 - 5.5 5.7 8.6 5.8 5.6 8.6 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein dsrm PF00035.26 ORF112434 - 5.9e-06 26.9 0.0 8e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Double-stranded RNA binding motif DND1_DSRM PF14709.7 ORF112434 - 0.056 13.7 0.6 0.33 11.2 0.6 2.0 1 1 0 1 1 1 0 double strand RNA binding domain from DEAD END PROTEIN 1 Cnn_1N PF07989.11 ORF112287 - 0.029 14.5 20.2 0.085 13.0 11.2 2.8 1 1 2 3 3 3 0 Centrosomin N-terminal motif 1 HMMR_C PF15908.5 ORF112287 - 0.086 13.1 11.8 1.3 9.2 3.3 2.7 1 1 2 3 3 3 0 Hyaluronan mediated motility receptor C-terminal bZIP_1 PF00170.21 ORF112287 - 0.18 11.9 22.2 0.29 11.3 5.3 3.2 2 1 1 3 3 3 0 bZIP transcription factor Uso1_p115_C PF04871.13 ORF112287 - 0.46 10.9 18.4 29 5.1 18.4 2.0 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Syntaxin-6_N PF09177.11 ORF112287 - 0.47 11.0 11.7 0.16 12.5 2.4 2.1 1 1 1 2 2 2 0 Syntaxin 6, N-terminal bZIP_2 PF07716.15 ORF112287 - 0.68 10.1 22.6 0.2 11.7 5.6 3.2 3 0 0 3 3 3 0 Basic region leucine zipper DUF1515 PF07439.11 ORF112287 - 1.3 9.0 4.7 43 4.2 4.7 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) AAA_23 PF13476.6 ORF112287 - 3 8.3 20.4 3.7 8.0 20.4 1.1 1 0 0 1 1 1 0 AAA domain Mak16 PF04874.14 ORF112287 - 6.4 7.5 18.6 42 4.8 18.6 1.9 1 1 0 1 1 1 0 Mak16 protein C-terminal region Mt_ATP-synt_D PF05873.12 ORF112287 - 8.8 6.2 11.9 13 5.6 1.6 2.2 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) DUF3781 PF12636.7 ORF112141 - 0.026 14.4 1.4 0.044 13.7 1.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) EF-hand_6 PF13405.6 ORF111520 - 5.1e-05 22.9 0.1 0.00028 20.6 0.0 2.4 3 1 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF111520 - 0.0018 17.7 0.0 0.0065 15.9 0.0 2.0 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF111520 - 0.007 15.8 0.1 0.017 14.6 0.1 1.7 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF111520 - 0.048 13.5 0.2 0.6 10.0 0.1 2.6 2 1 0 2 2 2 0 EF-hand domain pair EF-hand_7 PF13499.6 ORF111520 - 0.1 13.1 0.1 0.12 12.8 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain pair Memo PF01875.17 ORF111090 - 3.2e-11 42.9 0.0 4.2e-11 42.5 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein Thioredoxin_16 PF18569.1 ORF111090 - 0.075 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain Pkinase PF00069.25 ORF11038 - 6e-05 22.5 0.1 7.1e-05 22.3 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pet20 PF08692.10 ORF11038 - 0.0091 16.7 0.0 0.012 16.4 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial protein Pet20 Pkinase PF00069.25 ORF109432 - 3.1e-37 128.4 0.2 3.4e-37 128.3 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF109432 - 9.1e-18 64.5 0.0 9.5e-18 64.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF109432 - 1.8e-05 23.8 0.0 1.8e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF109432 - 0.00012 21.5 0.0 0.00015 21.2 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF109432 - 0.0035 16.3 0.0 0.0042 16.1 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF109432 - 0.038 13.3 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF109432 - 0.074 13.0 0.0 0.097 12.6 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family ArAE_1_C PF11728.8 ORF108590 - 0.013 15.5 1.2 0.019 15.0 0.9 1.5 1 1 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain DUF1359 PF07097.11 ORF108590 - 0.035 14.4 2.5 0.46 10.8 2.5 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1359) DUF1043 PF06295.12 ORF108590 - 0.04 13.9 0.1 0.043 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) RPA_interact_M PF14767.6 ORF108590 - 2.1 9.0 6.4 8.5 7.0 6.4 2.0 1 1 0 1 1 1 0 Replication protein A interacting middle DUF4880 PF16220.5 ORF10820 - 0.042 13.7 3.1 0.12 12.3 3.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4880) RNA_pol_Rpb4 PF03874.16 ORF108114 - 5.8e-08 33.1 0.7 6.9e-08 32.9 0.7 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb4 ALG3 PF05208.13 ORF107879 - 2.3e-10 40.5 2.6 2.6e-10 40.3 2.6 1.0 1 0 0 1 1 1 1 ALG3 protein PaaA_PaaC PF05138.12 ORF106941 - 0.044 12.9 0.0 0.052 12.7 0.0 1.1 1 0 0 1 1 1 0 Phenylacetic acid catabolic protein FANCI_HD2 PF14680.6 ORF106941 - 0.052 12.8 0.1 0.064 12.5 0.1 1.1 1 0 0 1 1 1 0 FANCI helical domain 2 Sec62 PF03839.16 ORF106532 - 4.2 6.8 9.5 2.3 7.7 1.5 2.1 2 0 0 2 2 2 0 Translocation protein Sec62 OppC_N PF12911.7 ORF106532 - 8.8 6.4 11.5 0.74 9.8 0.2 2.6 2 1 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C Sugar_tr PF00083.24 ORF105826 - 4.6e-15 55.4 7.4 4.8e-15 55.4 7.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Longin_2 PF18639.1 ORF105370 - 0.007 16.2 0.8 0.0086 16.0 0.8 1.2 1 0 0 1 1 1 1 Yeast longin domain RPAP2_Rtr1 PF04181.13 ORF104570 - 0.19 12.1 5.1 0.31 11.4 0.2 2.8 3 0 0 3 3 3 0 Rtr1/RPAP2 family MFS_Mycoplasma PF07672.13 ORF104546 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF104546 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF104546 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF104546 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF104546 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF104546 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF104546 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF104546 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) CC2D2AN-C2 PF15625.6 ORF103726 - 0.014 15.1 0.1 0.017 14.8 0.1 1.2 1 0 0 1 1 1 0 CC2D2A N-terminal C2 domain Spectrin_like PF18373.1 ORF103627 - 0.013 15.5 0.2 0.03 14.4 0.2 1.7 1 0 0 1 1 1 0 Spectrin like domain Cnd1 PF12717.7 ORF103627 - 0.038 14.0 2.0 0.046 13.7 2.0 1.2 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 FliG_N PF14842.6 ORF103627 - 0.04 14.5 1.2 0.043 14.4 0.4 1.5 2 0 0 2 2 2 0 FliG N-terminal domain DUF2164 PF09932.9 ORF103627 - 0.059 13.4 0.7 0.083 13.0 0.2 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2164) RsbU_N PF08673.10 ORF103627 - 0.11 12.6 1.3 0.82 9.8 0.0 2.4 2 1 0 2 2 2 0 Phosphoserine phosphatase RsbU, N-terminal domain DUF3349 PF11829.8 ORF103627 - 0.11 13.3 0.4 0.11 13.3 0.4 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3349) Apelin PF15360.6 ORF103491 - 7.5 7.2 9.9 0.44 11.1 2.3 2.4 2 1 0 2 2 2 0 APJ endogenous ligand DUF4880 PF16220.5 ORF101935 - 0.042 13.7 3.1 0.12 12.3 3.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4880) Lactamase_B_2 PF12706.7 ORF101882 - 2.7e-07 30.3 0.0 2.8e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 ORF101882 - 4.3e-05 23.4 0.0 5.3e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 ORF101882 - 0.00024 21.2 0.1 0.00025 21.1 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily DUF3391 PF11871.8 ORF101687 - 0.15 12.6 2.8 0.19 12.3 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) Kelch_1 PF01344.25 ORF101265 - 9.5e-16 57.1 0.0 2.6e-06 26.9 0.1 3.1 3 0 0 3 3 3 3 Kelch motif Kelch_6 PF13964.6 ORF101265 - 7.9e-15 54.5 0.3 7.7e-05 22.8 0.0 3.0 3 0 0 3 3 3 3 Kelch motif Kelch_4 PF13418.6 ORF101265 - 1.2e-06 28.4 0.8 0.071 13.1 0.0 3.1 2 1 1 3 3 3 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF101265 - 3.4e-06 26.9 0.3 0.028 14.4 0.2 3.2 3 0 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 ORF101265 - 0.0005 19.9 0.3 3.2 7.9 0.0 3.1 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 ORF101265 - 0.0017 18.6 0.1 3.2 8.1 0.0 2.8 2 1 0 3 3 3 2 Galactose oxidase, central domain FRG1 PF06229.12 NODE_52522_length_340_cov_1.439344_g44601_i0reverse_frame_1 - 0.064 13.0 0.1 0.075 12.7 0.1 1.1 1 0 0 1 1 1 0 FRG1-like domain DUF3678 PF12435.8 NODE_52522_length_340_cov_1.439344_g44601_i0forward_frame_1 - 0.065 12.6 0.5 0.11 11.8 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) SEEEED PF14797.6 NODE_52520_length_340_cov_1.531148_g44599_i0reverse_frame_1 - 0.13 12.4 18.8 0.16 12.1 18.8 1.2 1 0 0 1 1 1 0 Serine-rich region of AP3B1, clathrin-adaptor complex DUF3807 PF12720.7 NODE_52520_length_340_cov_1.531148_g44599_i0reverse_frame_1 - 4.7 7.4 12.3 5.7 7.2 12.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Glycos_transf_1 PF00534.20 NODE_52519_length_340_cov_1.603279_g44598_i0forward_frame_1 - 4.6e-06 26.3 0.0 5.7e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 NODE_52519_length_340_cov_1.603279_g44598_i0forward_frame_1 - 0.002 18.6 0.0 0.0027 18.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epiglycanin_C PF14654.6 NODE_52505_length_340_cov_2.272131_g44584_i0forward_frame_1 - 0.12 12.5 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region A_deaminase_N PF08451.11 NODE_52504_length_340_cov_2.288525_g44583_i0reverse_frame_1 - 0.00063 20.0 0.4 0.00083 19.6 0.4 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase N-terminal Relaxase PF03432.14 NODE_52504_length_340_cov_2.288525_g44583_i0reverse_frame_1 - 0.054 13.1 1.6 0.058 13.0 1.6 1.1 1 0 0 1 1 1 0 Relaxase/Mobilisation nuclease domain DUF4534 PF15049.6 NODE_52503_length_340_cov_2.344262_g44582_i0forward_frame_1 - 0.047 13.4 2.4 0.061 13.1 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4534) ODV-E18 PF10717.9 NODE_52499_length_340_cov_2.567213_g44578_i0forward_frame_1 - 0.25 11.2 1.2 0.41 10.6 1.1 1.5 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 adh_short PF00106.25 NODE_52491_length_340_cov_3.872131_g44570_i0forward_frame_1 - 1.4e-26 93.2 0.0 1.5e-26 93.1 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_52491_length_340_cov_3.872131_g44570_i0forward_frame_1 - 1.5e-20 73.7 0.0 1.7e-20 73.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 NODE_52491_length_340_cov_3.872131_g44570_i0forward_frame_1 - 0.00097 19.1 0.0 0.0011 18.9 0.0 1.0 1 0 0 1 1 1 1 KR domain BofA PF07441.11 NODE_52489_length_340_cov_10.803279_g44568_i0reverse_frame_1 - 0.0037 17.4 1.7 0.05 13.8 0.1 2.1 2 0 0 2 2 2 1 SigmaK-factor processing regulatory protein BofA Melittin PF01372.17 NODE_52489_length_340_cov_10.803279_g44568_i0reverse_frame_1 - 0.22 11.5 0.6 14 5.8 0.2 2.4 2 0 0 2 2 2 0 Melittin DUF2070 PF09843.9 NODE_52488_length_340_cov_16.796721_g44567_i0reverse_frame_1 - 1.4 7.1 5.8 1.7 6.8 5.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3450 PF11932.8 NODE_52487_length_340_cov_29.918033_g44566_i0forward_frame_1 - 0.0056 16.0 0.7 0.0074 15.6 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Mad3_BUB1_II PF08171.11 NODE_52487_length_340_cov_29.918033_g44566_i0forward_frame_1 - 0.015 15.4 0.6 0.015 15.4 0.6 1.6 2 0 0 2 2 2 0 Mad3/BUB1 homology region 2 ALMT PF11744.8 NODE_52487_length_340_cov_29.918033_g44566_i0forward_frame_1 - 0.07 12.0 1.8 0.082 11.7 1.8 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Ribosomal_S14 PF00253.21 NODE_52483_length_340_cov_53.845902_g44562_i0forward_frame_1 - 1.8 8.4 6.0 10 6.0 6.0 2.0 1 1 0 1 1 1 0 Ribosomal protein S14p/S29e CDC24_OB1 PF17246.2 NODE_52481_length_340_cov_55.514754_g44560_i0forward_frame_1 - 0.041 14.0 0.4 0.056 13.6 0.4 1.2 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 1 Herpes_capsid PF06112.11 NODE_52478_length_340_cov_57.819672_g44557_i0forward_frame_1 - 0.73 9.9 3.8 0.86 9.7 3.8 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein zf-C6H2 PF15801.5 NODE_52477_length_340_cov_61.885246_g44556_i0reverse_frame_1 - 0.47 10.8 3.6 3.2 8.1 0.1 2.3 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding EcoRII-N PF09217.10 NODE_52476_length_340_cov_64.718033_g44555_i0reverse_frame_1 - 0.056 13.2 1.1 0.87 9.3 0.3 2.0 1 1 1 2 2 2 0 Restriction endonuclease EcoRII, N-terminal zf-H3C2 PF16721.5 NODE_52476_length_340_cov_64.718033_g44555_i0forward_frame_1 - 0.2 12.0 2.4 0.21 11.9 0.6 1.9 1 1 1 2 2 2 0 Zinc-finger like, probable DNA-binding zf-B_box PF00643.24 NODE_52469_length_340_cov_90.488525_g44548_i0reverse_frame_1 - 7.5e-07 29.2 1.2 1.2e-06 28.6 1.2 1.3 1 0 0 1 1 1 1 B-box zinc finger AAA_12 PF13087.6 NODE_52467_length_340_cov_94.485246_g44546_i0forward_frame_1 - 2.6e-23 82.7 0.4 3.1e-23 82.5 0.4 1.1 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 NODE_52467_length_340_cov_94.485246_g44546_i0forward_frame_1 - 2.2e-05 24.2 0.1 4.3e-05 23.2 0.1 1.5 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 NODE_52467_length_340_cov_94.485246_g44546_i0forward_frame_1 - 0.0065 16.2 0.0 0.0079 16.0 0.0 1.1 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase zf-RING_12 PF17976.1 NODE_52464_length_340_cov_119.836066_g44543_i0reverse_frame_1 - 0.1 12.9 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain SR-25 PF10500.9 NODE_52453_length_340_cov_182.583607_g44532_i0reverse_frame_1 - 0.037 13.6 12.5 0.042 13.5 12.5 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Dymeclin PF09742.9 NODE_52450_length_340_cov_204.039344_g44529_i0reverse_frame_1 - 0.1 11.0 1.7 0.093 11.1 1.7 1.2 1 0 0 1 1 1 0 Dyggve-Melchior-Clausen syndrome protein TAP35_44 PF07265.11 NODE_52450_length_340_cov_204.039344_g44529_i0reverse_frame_1 - 7.8 6.5 5.8 0.73 9.9 1.0 1.7 2 1 1 3 3 3 0 Tapetum specific protein TAP35/TAP44 RNA_pol_Rpb4 PF03874.16 NODE_52446_length_340_cov_1011.334426_g44525_i0forward_frame_1 - 4.4e-09 36.7 1.5 3.9e-08 33.7 1.5 1.9 1 1 0 1 1 1 1 RNA polymerase Rpb4 Terminase_3C PF17288.2 NODE_52444_length_340_cov_17873.754098_g44523_i0reverse_frame_1 - 0.32 11.4 5.5 0.2 12.0 3.5 1.4 1 1 0 1 1 1 0 Terminase RNAseH like domain zf-met PF12874.7 NODE_52444_length_340_cov_17873.754098_g44523_i0forward_frame_1 - 0.25 11.8 2.1 10 6.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type cNMP_binding PF00027.29 NODE_52431_length_341_cov_1.849673_g44510_i0forward_frame_1 - 0.0054 16.8 0.0 0.0089 16.1 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain UBM PF14377.6 NODE_52431_length_341_cov_1.849673_g44510_i0forward_frame_1 - 0.12 11.9 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin binding region zf-TFIIB PF13453.6 NODE_52427_length_341_cov_2.078431_g44506_i0forward_frame_1 - 0.016 14.5 1.4 0.5 9.7 0.1 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger DUF4572 PF15139.6 NODE_52425_length_341_cov_2.114379_g44504_i0forward_frame_1 - 0.1 12.5 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4572) LST1 PF05083.13 NODE_52419_length_341_cov_2.205882_g44498_i0reverse_frame_1 - 0.076 13.3 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 LST-1 protein DUF1439 PF07273.12 NODE_52411_length_341_cov_2.611111_g44490_i0forward_frame_1 - 0.027 14.3 0.0 0.035 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1439) Suv3_C_1 PF18147.1 NODE_52406_length_341_cov_2.931373_g44485_i0reverse_frame_1 - 0.09 12.7 0.3 0.15 11.9 0.3 1.3 1 0 0 1 1 1 0 Suv3 C-terminal domain 1 AA_permease PF00324.21 NODE_52405_length_341_cov_3.133987_g44484_i0reverse_frame_1 - 1.1e-32 113.2 15.0 1.2e-32 113.2 15.0 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_52405_length_341_cov_3.133987_g44484_i0reverse_frame_1 - 5.2e-10 38.7 13.1 5.9e-10 38.5 13.1 1.0 1 0 0 1 1 1 1 Amino acid permease Ank_4 PF13637.6 NODE_52400_length_341_cov_3.460784_g44479_i0forward_frame_1 - 0.041 14.5 0.0 1.1 9.9 0.0 2.5 2 1 0 2 2 2 0 Ankyrin repeats (many copies) ABC_tran PF00005.27 NODE_52397_length_341_cov_3.526144_g44476_i0forward_frame_1 - 0.0032 18.0 0.0 0.0034 17.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter Mis14 PF08641.12 NODE_52397_length_341_cov_3.526144_g44476_i0forward_frame_1 - 0.056 13.8 0.2 0.075 13.3 0.2 1.1 1 0 0 1 1 1 0 Kinetochore protein Mis14 like Fe_dep_repr_C PF02742.15 NODE_52397_length_341_cov_3.526144_g44476_i0forward_frame_1 - 0.11 12.5 0.1 0.18 11.9 0.1 1.2 1 0 0 1 1 1 0 Iron dependent repressor, metal binding and dimerisation domain TP53IP5 PF15331.6 NODE_52392_length_341_cov_27.513072_g44471_i0reverse_frame_1 - 0.18 11.9 0.8 0.21 11.7 0.8 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 YabA PF06156.13 NODE_52389_length_341_cov_50.973856_g44468_i0reverse_frame_1 - 0.032 14.8 3.9 0.032 14.8 3.9 1.7 1 1 1 2 2 2 0 Initiation control protein YabA DUF1043 PF06295.12 NODE_52389_length_341_cov_50.973856_g44468_i0reverse_frame_1 - 0.057 13.4 6.2 0.069 13.2 6.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) LCIB_C_CA PF18599.1 NODE_52389_length_341_cov_50.973856_g44468_i0reverse_frame_1 - 0.13 11.6 1.9 0.14 11.4 1.5 1.3 1 1 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases HMw1_D2 PF18254.1 NODE_52378_length_341_cov_82.379085_g44457_i0reverse_frame_1 - 0.0051 17.2 0.1 0.0089 16.4 0.0 1.4 1 1 0 1 1 1 1 HMW1 domain 2 RRM_1 PF00076.22 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 9.6e-12 44.6 0.1 1.5e-11 44.0 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 0.02 14.9 0.1 0.029 14.4 0.1 1.3 1 0 0 1 1 1 0 RNA binding motif RL PF17797.1 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 0.039 13.9 0.0 0.059 13.3 0.0 1.3 1 0 0 1 1 1 0 RL domain RRM_5 PF13893.6 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 0.046 13.3 0.0 0.053 13.1 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 0.11 12.7 0.1 0.33 11.1 0.1 1.7 1 1 0 1 1 1 0 RNA recognition motif RuvB_C PF05491.13 NODE_52362_length_341_cov_255.957516_g44441_i0forward_frame_1 - 0.2 11.6 0.0 0.3 11.0 0.0 1.2 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain Tme5_EGF_like PF09064.10 NODE_52360_length_341_cov_815.689542_g44439_i0forward_frame_1 - 0.017 15.0 0.8 0.091 12.7 0.1 2.4 2 0 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like Pyr_redox_2 PF07992.14 NODE_52356_length_342_cov_1.442997_g44435_i0reverse_frame_1 - 1.4e-09 37.7 0.0 1.5e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DUF1560 PF07597.11 NODE_52355_length_342_cov_1.537459_g44434_i0reverse_frame_1 - 0.082 12.9 0.6 0.16 12.0 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1560) DUF287 PF03384.14 NODE_52352_length_342_cov_1.739414_g44431_i0reverse_frame_1 - 0.032 14.6 0.0 3.4 8.1 0.0 2.2 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 HEAT PF02985.22 NODE_52350_length_342_cov_1.866450_g44429_i0reverse_frame_1 - 0.0032 17.6 0.2 2.4 8.6 0.0 3.1 3 0 0 3 3 3 1 HEAT repeat L_lactis_RepB_C PF06430.12 NODE_52350_length_342_cov_1.866450_g44429_i0reverse_frame_1 - 0.023 14.7 0.2 0.027 14.5 0.2 1.1 1 0 0 1 1 1 0 Lactococcus lactis RepB C-terminus HEAT_2 PF13646.6 NODE_52350_length_342_cov_1.866450_g44429_i0reverse_frame_1 - 0.08 13.3 0.1 0.14 12.6 0.1 1.5 1 1 0 1 1 1 0 HEAT repeats Ribosomal_S8 PF00410.19 NODE_52350_length_342_cov_1.866450_g44429_i0reverse_frame_1 - 0.12 12.4 0.2 0.71 9.8 0.3 1.8 1 1 1 2 2 2 0 Ribosomal protein S8 Kinesin PF00225.23 NODE_52337_length_342_cov_2.902280_g44416_i0forward_frame_1 - 3.3e-08 32.9 0.4 3.9e-08 32.6 0.0 1.4 2 0 0 2 2 2 1 Kinesin motor domain AIF_C PF14721.6 NODE_52336_length_342_cov_2.931596_g44415_i0forward_frame_1 - 0.01 16.2 1.3 0.012 15.9 1.3 1.2 1 0 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term DUF3418 PF11898.8 NODE_52332_length_342_cov_3.179153_g44411_i0forward_frame_1 - 1.7e-10 40.3 0.1 1.9e-10 40.1 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) DegT_DnrJ_EryC1 PF01041.17 NODE_52328_length_342_cov_3.618893_g44407_i0reverse_frame_1 - 2e-31 109.7 0.2 2.1e-31 109.5 0.2 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family GCD14 PF08704.10 NODE_52328_length_342_cov_3.618893_g44407_i0reverse_frame_1 - 0.033 13.8 0.0 0.037 13.7 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Exog_C PF18026.1 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_1 - 0.024 14.7 0.0 0.048 13.7 0.0 1.5 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain UPF0158 PF03682.13 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_1 - 0.062 13.3 0.7 0.081 12.9 0.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) DUF4980 PF16352.5 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_1 - 0.076 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4980) Dis3l2_C_term PF17877.1 NODE_52327_length_342_cov_4.084691_g44406_i0forward_frame_1 - 0.19 12.1 1.2 1.2 9.5 0.4 2.3 2 1 0 2 2 2 0 DIS3-like exonuclease 2 C terminal Patched PF02460.18 NODE_52312_length_342_cov_62.967427_g44391_i0forward_frame_1 - 7.7e-06 24.3 0.4 8.5e-06 24.1 0.4 1.0 1 0 0 1 1 1 1 Patched family Sterol-sensing PF12349.8 NODE_52312_length_342_cov_62.967427_g44391_i0forward_frame_1 - 0.069 13.0 2.3 0.089 12.6 2.3 1.1 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation PalH PF08733.10 NODE_52312_length_342_cov_62.967427_g44391_i0forward_frame_1 - 0.16 10.9 2.1 0.2 10.6 2.1 1.1 1 0 0 1 1 1 0 PalH/RIM21 MMPL PF03176.15 NODE_52312_length_342_cov_62.967427_g44391_i0forward_frame_1 - 0.24 10.3 1.5 0.28 10.1 1.5 1.1 1 0 0 1 1 1 0 MMPL family DLIC PF05783.11 NODE_52304_length_342_cov_76.097720_g44383_i0reverse_frame_1 - 0.071 11.9 0.0 0.078 11.8 0.0 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) Neuropep_like PF15161.6 NODE_52302_length_342_cov_83.250814_g44381_i0reverse_frame_1 - 0.068 12.9 0.4 0.14 11.8 0.4 1.5 1 0 0 1 1 1 0 Neuropeptide-like PDR_CDR PF06422.12 NODE_52293_length_342_cov_110.465798_g44372_i0reverse_frame_1 - 0.27 11.2 1.8 0.4 10.6 1.8 1.3 1 0 0 1 1 1 0 CDR ABC transporter Phage-MuB_C PF09077.11 NODE_52292_length_342_cov_110.602606_g44371_i0reverse_frame_1 - 0.089 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Mu B transposition protein, C terminal DUF3437 PF11919.8 NODE_52290_length_342_cov_117.358306_g44369_i0reverse_frame_1 - 0.065 13.2 0.3 0.087 12.7 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DUF2505 PF10698.9 NODE_52290_length_342_cov_117.358306_g44369_i0forward_frame_1 - 0.13 12.3 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2505) E3_binding PF02817.17 NODE_52283_length_342_cov_322.967427_g44362_i0forward_frame_1 - 0.094 13.1 0.4 0.23 11.8 0.4 1.7 1 0 0 1 1 1 0 e3 binding domain BAR_2 PF10455.9 NODE_52269_length_343_cov_1.623377_g44349_i0reverse_frame_3 - 0.073 12.2 0.0 0.087 11.9 0.0 1.1 1 0 0 1 1 1 0 Bin/amphiphysin/Rvs domain for vesicular trafficking p12I PF12233.8 NODE_52267_length_343_cov_1.649351_g44347_i0reverse_frame_2 - 0.013 16.0 1.6 0.019 15.5 1.6 1.4 1 1 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein EF-hand_1 PF00036.32 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 7e-06 25.2 1.1 1.4e-05 24.3 1.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 7.6e-05 22.3 1.6 0.00018 21.2 1.6 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 0.0026 17.6 0.8 0.0049 16.7 0.8 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 0.0047 16.4 1.3 0.0078 15.7 1.3 1.3 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 0.025 15.0 0.2 0.046 14.2 0.2 1.4 1 0 0 1 1 1 0 EF-hand domain pair IL34 PF15036.6 NODE_52265_length_343_cov_1.879870_g44345_i0reverse_frame_3 - 0.053 13.6 0.1 0.057 13.5 0.1 1.1 1 0 0 1 1 1 0 Interleukin 34 UQ_con PF00179.26 NODE_52265_length_343_cov_1.879870_g44345_i0forward_frame_2 - 1.4e-18 66.9 0.0 1.6e-18 66.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 NODE_52265_length_343_cov_1.879870_g44345_i0forward_frame_2 - 0.00088 19.5 0.0 0.0011 19.3 0.0 1.2 1 0 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 NODE_52265_length_343_cov_1.879870_g44345_i0forward_frame_2 - 0.029 14.1 0.0 0.033 13.9 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B Dynactin_p22 PF07426.11 NODE_52263_length_343_cov_2.051948_g44343_i0reverse_frame_3 - 0.033 14.1 0.5 0.041 13.7 0.5 1.1 1 0 0 1 1 1 0 Dynactin subunit p22 MRF_C1 PF13887.6 NODE_52263_length_343_cov_2.051948_g44343_i0reverse_frame_3 - 0.32 10.2 1.4 0.97 8.7 0.1 2.2 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 PALP PF00291.25 NODE_52262_length_343_cov_2.055195_g44342_i0reverse_frame_3 - 8.4e-20 71.4 0.1 9e-20 71.3 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HTH_9 PF08221.11 NODE_52262_length_343_cov_2.055195_g44342_i0reverse_frame_3 - 0.012 15.7 0.1 0.02 15.0 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF4368 PF14287.6 NODE_52262_length_343_cov_2.055195_g44342_i0reverse_frame_3 - 0.089 13.1 0.1 0.15 12.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4368) PDEase_I PF00233.19 NODE_52261_length_343_cov_2.100649_g44341_i0reverse_frame_3 - 3.4e-32 112.1 0.4 3.8e-32 111.9 0.4 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase HD PF01966.22 NODE_52261_length_343_cov_2.100649_g44341_i0reverse_frame_3 - 0.064 13.5 0.2 0.088 13.0 0.2 1.4 1 1 0 1 1 1 0 HD domain PI3K_1B_p101 PF10486.9 NODE_52257_length_343_cov_2.324675_g44337_i0reverse_frame_3 - 0.098 10.4 0.0 0.098 10.4 0.0 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit zf-XS PF03470.14 NODE_52255_length_343_cov_2.551948_g44335_i0reverse_frame_3 - 0.1 12.9 0.4 0.18 12.1 0.4 1.4 1 0 0 1 1 1 0 XS zinc finger domain DUF997 PF06196.12 NODE_52253_length_343_cov_2.724026_g44333_i0reverse_frame_3 - 0.099 12.7 0.4 0.099 12.7 0.4 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF997) TcdB_N PF12918.7 NODE_52253_length_343_cov_2.724026_g44333_i0forward_frame_3 - 1.9 8.8 8.5 0.94 9.8 2.3 2.5 2 1 0 2 2 2 0 TcdB toxin N-terminal helical domain AKAP28 PF14469.6 NODE_52252_length_343_cov_2.727273_g44332_i0forward_frame_3 - 0.22 11.3 0.0 0.34 10.7 0.0 1.2 1 0 0 1 1 1 0 28 kDa A-kinase anchor DUF1168 PF06658.12 NODE_52248_length_343_cov_2.879870_g44328_i0reverse_frame_2 - 0.04 13.7 24.2 0.051 13.4 24.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Presenilin PF01080.17 NODE_52248_length_343_cov_2.879870_g44328_i0reverse_frame_2 - 1.2 7.8 6.4 1.2 7.9 6.4 1.0 1 0 0 1 1 1 0 Presenilin DUF2828 PF11443.8 NODE_52248_length_343_cov_2.879870_g44328_i0reverse_frame_2 - 2.7 6.0 11.6 2.8 5.9 11.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) PSI_PsaJ PF01701.18 NODE_52248_length_343_cov_2.879870_g44328_i0forward_frame_2 - 0.012 16.2 0.6 0.036 14.6 0.6 1.8 1 0 0 1 1 1 0 Photosystem I reaction centre subunit IX / PsaJ Glyco_hydro_39 PF01229.17 NODE_52247_length_343_cov_2.905844_g44327_i0reverse_frame_3 - 0.072 11.7 0.0 0.08 11.5 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 39 Blt1 PF12754.7 NODE_52243_length_343_cov_4.068182_g44323_i0reverse_frame_2 - 0.11 12.9 1.4 0.12 12.7 1.4 1.1 1 0 0 1 1 1 0 Blt1 N-terminal domain UPF0564 PF10595.9 NODE_52242_length_343_cov_5.405844_g44322_i0forward_frame_2 - 2e-16 60.0 9.8 2.8e-16 59.5 9.8 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0564 Sm_like PF16243.5 NODE_52241_length_343_cov_8.896104_g44321_i0forward_frame_2 - 0.036 14.2 0.0 1.7 8.8 0.0 2.1 2 0 0 2 2 2 0 Sm_like domain Mucin PF01456.17 NODE_52240_length_343_cov_23.165584_g44320_i0reverse_frame_3 - 0.033 14.2 16.7 0.037 14.0 16.7 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein SSP160 PF06933.11 NODE_52240_length_343_cov_23.165584_g44320_i0reverse_frame_3 - 0.45 8.6 15.2 0.45 8.7 15.2 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 GDE_N PF12439.8 NODE_52238_length_343_cov_40.253247_g44318_i0reverse_frame_2 - 0.094 12.1 0.2 0.11 11.9 0.2 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme N terminal SRP-alpha_N PF04086.13 NODE_52238_length_343_cov_40.253247_g44318_i0reverse_frame_2 - 4 7.3 15.6 4.3 7.2 15.6 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal AAA_23 PF13476.6 NODE_52238_length_343_cov_40.253247_g44318_i0reverse_frame_2 - 8.7 6.8 12.0 10 6.5 12.0 1.2 1 0 0 1 1 1 0 AAA domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks204.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks204.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks204.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks204.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:15 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UVR PF02151.19 NODE_52232_length_343_cov_59.970779_g44312_i0forward_frame_2 - 0.00031 20.4 4.1 0.00065 19.4 4.1 1.5 1 0 0 1 1 1 1 UvrB/uvrC motif Glyco_hydro_31 PF01055.26 NODE_52229_length_343_cov_64.678571_g44309_i0reverse_frame_2 - 8.9e-19 68.0 0.1 9.7e-19 67.9 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 SSL_OB PF09199.10 NODE_52226_length_343_cov_75.191558_g44306_i0forward_frame_3 - 0.012 15.9 0.1 0.019 15.3 0.1 1.3 1 0 0 1 1 1 0 Staphylococcal superantigen-like OB-fold domain Dockerin_1 PF00404.18 NODE_52225_length_343_cov_76.217532_g44305_i0reverse_frame_3 - 0.093 12.9 0.3 0.16 12.2 0.3 1.3 1 0 0 1 1 1 0 Dockerin type I domain Glycos_transf_1 PF00534.20 NODE_52224_length_343_cov_77.948052_g44304_i0forward_frame_3 - 0.015 14.8 0.1 0.018 14.6 0.1 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF1366 PF07104.11 NODE_52224_length_343_cov_77.948052_g44304_i0forward_frame_3 - 0.053 13.2 1.1 0.08 12.6 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1366) zf-C2H2 PF00096.26 NODE_52220_length_343_cov_86.006494_g44300_i0forward_frame_3 - 1.7e-06 28.1 4.1 0.0029 18.0 0.9 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_52220_length_343_cov_86.006494_g44300_i0forward_frame_3 - 6.2e-05 23.5 4.6 0.089 13.7 0.9 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_aberr PF17017.5 NODE_52220_length_343_cov_86.006494_g44300_i0forward_frame_3 - 0.0012 19.0 1.0 0.0019 18.3 0.3 1.6 2 0 0 2 2 2 1 Aberrant zinc-finger FOXP-CC PF16159.5 NODE_52220_length_343_cov_86.006494_g44300_i0forward_frame_3 - 0.052 14.2 3.9 0.26 11.9 0.9 2.4 1 1 1 2 2 2 0 FOXP coiled-coil domain COX6C PF02937.15 NODE_52220_length_343_cov_86.006494_g44300_i0forward_frame_3 - 4.2 7.6 6.5 0.86 9.8 1.6 2.2 2 1 1 3 3 3 0 Cytochrome c oxidase subunit VIc cEGF PF12662.7 NODE_52213_length_343_cov_108.253247_g44294_i0forward_frame_2 - 0.059 13.3 0.3 0.1 12.5 0.3 1.4 1 0 0 1 1 1 0 Complement Clr-like EGF-like Eapp_C PF10238.9 NODE_52204_length_343_cov_212.863636_g44285_i0forward_frame_3 - 0.1 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 E2F-associated phosphoprotein Keratin_B2_2 PF13885.6 NODE_52201_length_343_cov_245.529221_g44282_i0forward_frame_2 - 4.1 7.4 16.6 1.2 9.1 12.3 2.1 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein RNA_polI_A34 PF08208.11 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 0.0056 16.8 25.2 0.0063 16.6 25.2 1.1 1 0 0 1 1 1 1 DNA-directed RNA polymerase I subunit RPA34.5 SR-25 PF10500.9 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 0.0062 16.2 18.1 0.0066 16.1 18.1 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein GAGA_bind PF06217.12 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 1.2 9.4 16.4 1.3 9.2 16.4 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family CDC45 PF02724.14 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 1.9 6.6 21.9 2.1 6.5 21.9 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4604 PF15377.6 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 2 8.8 25.5 2.5 8.5 25.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) AP3D1 PF06375.11 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_2 - 0.27 11.5 12.5 0.28 11.4 12.5 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 zf-ANAPC11 PF12861.7 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 6.8e-27 93.4 11.0 8.1e-27 93.1 11.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 4.4e-18 65.3 11.9 6.9e-18 64.7 11.9 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 5e-07 29.5 9.2 1.3e-06 28.2 9.2 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 1.7e-06 28.2 16.6 2.1e-05 24.8 16.6 2.4 1 1 0 1 1 1 1 Ring finger domain zf-C3HC4_4 PF15227.6 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.00019 21.5 1.0 0.00019 21.5 1.0 2.5 2 1 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.00079 19.4 9.2 0.0015 18.5 9.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.012 15.6 12.3 0.062 13.3 12.4 2.1 1 1 1 2 2 2 0 zinc-RING finger domain zf-C3HC4_2 PF13923.6 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.013 15.4 6.7 0.013 15.4 6.7 2.9 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.017 14.9 1.7 0.017 14.9 1.7 2.6 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain DUF2310 PF10071.9 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.02 14.2 0.9 0.034 13.4 0.9 1.4 1 0 0 1 1 1 0 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) Rad50_zn_hook PF04423.14 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.033 14.0 0.0 0.084 12.7 0.0 1.8 1 0 0 1 1 1 0 Rad50 zinc hook motif zf-Nse PF11789.8 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.072 12.9 6.9 0.12 12.2 6.9 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_3 PF13920.6 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.16 11.9 13.6 3 7.8 12.7 2.4 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn-ribbon_8 PF09723.10 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.19 11.8 8.1 0.53 10.4 0.5 2.4 2 0 0 2 2 2 0 Zinc ribbon domain zf-RING_11 PF17123.5 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 0.82 9.5 15.9 11 5.9 15.9 2.5 1 1 0 1 1 1 0 RING-like zinc finger FANCL_C PF11793.8 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 1.4 9.2 14.3 9.9 6.4 14.3 2.5 1 1 0 1 1 1 0 FANCL C-terminal domain zf-HIT PF04438.16 NODE_52194_length_343_cov_471.415584_g44275_i0forward_frame_2 - 4.7 7.2 10.8 0.46 10.4 2.4 2.5 2 1 0 2 2 2 0 HIT zinc finger Phage_head_fibr PF11133.8 NODE_52187_length_344_cov_1.216828_g44268_i0forward_frame_2 - 0.06 12.8 0.0 0.081 12.3 0.0 1.2 1 0 0 1 1 1 0 Head fiber protein AAA_26 PF13500.6 NODE_52186_length_344_cov_1.420712_g44267_i0reverse_frame_3 - 1.8e-12 47.5 0.0 2e-12 47.4 0.0 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 NODE_52186_length_344_cov_1.420712_g44267_i0reverse_frame_3 - 0.0091 16.1 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain BRK PF07533.16 NODE_52185_length_344_cov_1.663430_g44266_i0reverse_frame_3 - 0.13 11.9 0.0 0.29 10.8 0.0 1.6 1 0 0 1 1 1 0 BRK domain cNMP_binding PF00027.29 NODE_52183_length_344_cov_1.705502_g44264_i0reverse_frame_3 - 0.0006 19.8 0.0 0.00078 19.5 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF5408 PF17402.2 NODE_52183_length_344_cov_1.705502_g44264_i0forward_frame_2 - 2.6 8.0 5.4 0.56 10.1 1.2 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5408) SPX PF03105.19 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_3 - 4.3 7.2 11.5 4.5 7.1 11.5 1.0 1 0 0 1 1 1 0 SPX domain Pex24p PF06398.11 NODE_52180_length_344_cov_1.873786_g44261_i0forward_frame_3 - 0.048 12.6 4.9 0.063 12.3 4.9 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Nop14 PF04147.12 NODE_52180_length_344_cov_1.873786_g44261_i0forward_frame_2 - 4.8 5.3 16.3 5.2 5.1 16.3 1.0 1 0 0 1 1 1 0 Nop14-like family TIG PF01833.24 NODE_52178_length_344_cov_2.064725_g44259_i0reverse_frame_3 - 4.9e-10 39.4 6.3 6.2e-09 35.8 3.2 2.2 1 1 1 2 2 2 2 IPT/TIG domain DUF4585 PF15232.6 NODE_52177_length_344_cov_2.132686_g44258_i0forward_frame_2 - 0.0025 17.8 0.0 0.0041 17.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4585) DUF5447 PF17525.2 NODE_52171_length_344_cov_2.223301_g44252_i0reverse_frame_3 - 0.018 15.5 0.6 0.03 14.8 0.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5447) Catalase PF00199.19 NODE_52171_length_344_cov_2.223301_g44252_i0reverse_frame_2 - 7.5e-43 147.1 0.1 8.2e-43 147.0 0.1 1.0 1 0 0 1 1 1 1 Catalase Tachystatin_A PF11406.8 NODE_52171_length_344_cov_2.223301_g44252_i0forward_frame_2 - 0.1 12.7 1.0 0.2 11.8 0.4 1.8 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A DUF3014 PF11219.8 NODE_52165_length_344_cov_2.653722_g44246_i0reverse_frame_3 - 0.034 14.4 0.0 0.1 12.9 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3014) GAT PF03127.14 NODE_52165_length_344_cov_2.653722_g44246_i0forward_frame_2 - 0.092 13.1 0.1 0.15 12.4 0.1 1.3 1 0 0 1 1 1 0 GAT domain NAD_binding_4 PF07993.12 NODE_52163_length_344_cov_2.857605_g44244_i0forward_frame_3 - 9.2e-15 54.5 0.0 9.5e-15 54.5 0.0 1.0 1 0 0 1 1 1 1 Male sterility protein PTN13_u3 PF16599.5 NODE_52162_length_344_cov_2.944984_g44243_i0forward_frame_2 - 0.018 15.1 0.1 0.02 14.9 0.1 1.1 1 0 0 1 1 1 0 Unstructured linker region on PTN13 protein between PDZ HCR PF07111.12 NODE_52162_length_344_cov_2.944984_g44243_i0forward_frame_2 - 0.16 10.0 0.1 0.17 9.9 0.1 1.0 1 0 0 1 1 1 0 Alpha helical coiled-coil rod protein (HCR) LacY_symp PF01306.19 NODE_52161_length_344_cov_2.987055_g44242_i0forward_frame_3 - 4.8e-51 173.8 6.0 5.3e-51 173.7 6.0 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1_like PF12832.7 NODE_52161_length_344_cov_2.987055_g44242_i0forward_frame_3 - 0.029 13.2 2.4 0.033 13.0 2.4 1.0 1 0 0 1 1 1 0 MFS_1 like family Plug PF07715.15 NODE_52160_length_344_cov_3.443366_g44241_i0reverse_frame_3 - 3e-11 43.9 0.0 4.1e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain DUF3268 PF11672.8 NODE_52160_length_344_cov_3.443366_g44241_i0reverse_frame_2 - 0.53 10.6 7.3 0.65 10.3 7.3 1.2 1 0 0 1 1 1 0 zinc-finger-containing domain Lamprin PF06403.11 NODE_52158_length_344_cov_4.404531_g44239_i0forward_frame_3 - 2.8 7.9 11.8 3.5 7.6 1.6 2.1 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_52158_length_344_cov_4.404531_g44239_i0forward_frame_2 - 5.6 6.9 17.9 1.7 8.6 4.7 2.2 1 1 1 2 2 2 0 Lamprin Adeno_E4 PF05385.11 NODE_52155_length_344_cov_39.304207_g44236_i0reverse_frame_3 - 0.056 13.5 1.3 0.056 13.5 1.3 1.7 2 1 1 3 3 3 0 Mastadenovirus early E4 13 kDa protein Ribosomal_L17 PF01196.19 NODE_52151_length_344_cov_53.110032_g44232_i0forward_frame_2 - 0.0058 17.5 0.0 0.0078 17.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L17 CPDase PF07823.11 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_3 - 0.075 12.7 0.0 0.083 12.6 0.0 1.1 1 0 0 1 1 1 0 Cyclic phosphodiesterase-like protein EF-hand_1 PF00036.32 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 3.3e-23 79.4 3.9 3.1e-08 32.6 0.2 3.3 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 9.2e-19 67.7 1.2 1.9e-14 53.9 0.9 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 3.3e-18 64.0 2.7 1.9e-07 30.5 0.1 3.2 3 0 0 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 9.9e-18 62.8 1.5 1.4e-07 30.7 0.2 3.3 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 4.6e-15 55.2 2.4 7.2e-05 22.6 0.4 3.2 3 0 0 3 3 3 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 3.9e-05 23.9 0.2 0.00017 21.9 0.2 1.9 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 0.00051 20.0 3.0 0.024 14.6 0.2 2.8 1 1 0 3 3 3 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 0.0079 16.5 0.2 0.044 14.1 0.1 2.1 2 1 0 2 2 2 1 EF-hand domain Dockerin_1 PF00404.18 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 0.1 12.8 3.5 15 5.8 0.0 3.0 2 1 1 3 3 3 0 Dockerin type I domain DUF1450 PF07293.11 NODE_52149_length_344_cov_56.135922_g44230_i0forward_frame_2 - 0.19 11.5 0.1 0.19 11.5 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1450) ComC PF03047.14 NODE_52145_length_344_cov_57.822006_g44226_i0forward_frame_2 - 0.16 11.8 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 COMC family PsbJ PF01788.17 NODE_52140_length_344_cov_65.294498_g44221_i0forward_frame_2 - 6.6e-10 38.7 5.1 1.1e-09 38.0 5.1 1.3 1 0 0 1 1 1 1 PsbJ Arm_3 PF16186.5 NODE_52136_length_344_cov_72.423948_g44217_i0reverse_frame_3 - 2.1e-07 30.4 0.8 3.6e-07 29.7 0.8 1.4 1 0 0 1 1 1 1 Atypical Arm repeat zf-C3HC4_2 PF13923.6 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 0.0015 18.3 7.2 0.0015 18.3 7.2 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 0.0081 16.5 6.7 0.0081 16.5 6.7 1.8 2 0 0 2 2 2 1 Ring finger domain C1_2 PF03107.16 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 0.064 13.6 5.8 0.064 13.6 5.8 2.1 2 0 0 2 2 2 0 C1 domain FYVE PF01363.21 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 0.15 12.2 9.6 0.26 11.5 9.6 1.4 1 0 0 1 1 1 0 FYVE zinc finger zf-RING_5 PF14634.6 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 0.2 11.6 14.4 0.78 9.7 14.3 1.9 1 1 0 1 1 1 0 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 0.72 9.5 9.4 0.067 12.8 4.3 1.8 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 1.1 9.4 9.1 0.14 12.2 4.3 1.9 2 0 0 2 2 2 0 RING-type zinc-finger zf-B_box PF00643.24 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 1.4 9.1 11.9 0.27 11.4 6.0 2.2 2 0 0 2 2 2 0 B-box zinc finger zf-C3HC4_3 PF13920.6 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 2.2 8.2 12.9 0.34 10.8 6.8 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) PAXNEB PF05625.11 NODE_52128_length_344_cov_95.854369_g44209_i0forward_frame_2 - 5.1e-07 29.2 0.0 7.2e-07 28.7 0.0 1.2 1 1 0 1 1 1 1 PAXNEB protein PaaA_PaaC PF05138.12 NODE_52127_length_344_cov_98.223301_g44208_i0reverse_frame_3 - 0.083 12.0 0.0 0.092 11.9 0.0 1.1 1 0 0 1 1 1 0 Phenylacetic acid catabolic protein YqhR PF11085.8 NODE_52126_length_344_cov_98.372168_g44207_i0reverse_frame_3 - 3.9 7.4 9.8 3.6 7.5 8.8 1.3 1 1 0 1 1 1 0 Conserved membrane protein YqhR Mog1 PF04603.12 NODE_52126_length_344_cov_98.372168_g44207_i0forward_frame_3 - 0.053 13.9 0.5 0.068 13.5 0.5 1.1 1 0 0 1 1 1 0 Ran-interacting Mog1 protein Ribosomal_L6e PF01159.19 NODE_52126_length_344_cov_98.372168_g44207_i0forward_frame_3 - 0.091 13.3 0.3 0.091 13.3 0.3 1.7 2 0 0 2 2 2 0 Ribosomal protein L6e DinI PF06183.13 NODE_52126_length_344_cov_98.372168_g44207_i0forward_frame_3 - 0.1 12.9 0.6 0.22 11.9 0.6 1.7 1 0 0 1 1 1 0 DinI-like family OmpW PF03922.14 NODE_52118_length_344_cov_123.278317_g44199_i0forward_frame_3 - 0.12 12.3 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 OmpW family TssO PF17561.2 NODE_52113_length_344_cov_192.012945_g44194_i0reverse_frame_2 - 0.14 12.3 6.0 0.084 13.0 1.9 2.0 1 1 1 2 2 2 0 Type VI secretion system, TssO zf-met PF12874.7 NODE_52102_length_344_cov_17642.362460_g44184_i0reverse_frame_2 - 0.26 11.7 2.1 10 6.7 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Calpain_inhib PF00748.19 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_3 - 0.24 11.9 5.2 1.3 9.5 5.2 1.9 1 1 0 1 1 1 0 Calpain inhibitor Med13_C PF06333.12 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_3 - 0.29 10.4 16.7 0.33 10.2 16.7 1.0 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain ASD2 PF08687.11 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_3 - 1.2 8.6 4.4 1.3 8.5 4.4 1.0 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 Guanylate_kin PF00625.21 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_2 - 0.03 14.0 0.1 0.037 13.7 0.1 1.1 1 0 0 1 1 1 0 Guanylate kinase UPF0060 PF02694.15 NODE_52095_length_345_cov_1.493548_g44177_i0reverse_frame_2 - 0.16 12.2 2.5 0.22 11.8 2.5 1.2 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family AnmK PF03702.14 NODE_52095_length_345_cov_1.493548_g44177_i0forward_frame_2 - 0.15 11.1 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Anhydro-N-acetylmuramic acid kinase MgtE PF01769.16 NODE_52093_length_345_cov_1.558065_g44175_i0forward_frame_3 - 0.67 10.3 3.6 0.98 9.8 3.6 1.4 1 1 0 1 1 1 0 Divalent cation transporter ERCC4 PF02732.15 NODE_52092_length_345_cov_1.677419_g44174_i0forward_frame_3 - 0.0086 16.3 0.9 0.011 16.0 0.9 1.2 1 0 0 1 1 1 1 ERCC4 domain CUE PF02845.16 NODE_52092_length_345_cov_1.677419_g44174_i0forward_frame_2 - 0.0029 17.3 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 CUE domain HBS1_N PF08938.10 NODE_52092_length_345_cov_1.677419_g44174_i0forward_frame_2 - 0.0095 16.2 0.0 0.015 15.6 0.0 1.3 1 0 0 1 1 1 1 HBS1 N-terminus UvrA_inter PF17760.1 NODE_52090_length_345_cov_1.790323_g44172_i0reverse_frame_2 - 2.7e-21 75.7 0.2 3.4e-21 75.4 0.2 1.1 1 0 0 1 1 1 1 UvrA interaction domain EAL PF00563.20 NODE_52090_length_345_cov_1.790323_g44172_i0reverse_frame_2 - 0.087 12.3 0.1 0.1 12.1 0.1 1.1 1 0 0 1 1 1 0 EAL domain OTT_1508_deam PF14441.6 NODE_52090_length_345_cov_1.790323_g44172_i0reverse_frame_2 - 0.096 12.7 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 OTT_1508-like deaminase ABC1 PF03109.16 NODE_52089_length_345_cov_1.835484_g44171_i0forward_frame_2 - 5.3e-17 62.1 0.1 8.4e-17 61.4 0.1 1.3 1 0 0 1 1 1 1 ABC1 family LptF_LptG PF03739.14 NODE_52087_length_345_cov_2.000000_g44169_i0forward_frame_2 - 2.2 7.1 4.5 2.5 6.8 4.5 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Fimbrial PF00419.20 NODE_52086_length_345_cov_2.003226_g44168_i0reverse_frame_3 - 3.1e-06 27.5 0.3 0.034 14.4 0.0 2.3 2 1 0 2 2 2 2 Fimbrial protein CUB PF00431.20 NODE_52085_length_345_cov_2.009677_g44167_i0forward_frame_2 - 0.075 13.4 0.9 0.2 12.0 0.1 1.8 2 0 0 2 2 2 0 CUB domain DUF1202 PF06717.11 NODE_52081_length_345_cov_2.112903_g44163_i0forward_frame_2 - 1.3e-73 248.1 1.2 1.4e-73 248.0 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1202) Lipoprotein_11 PF03260.13 NODE_52081_length_345_cov_2.112903_g44163_i0forward_frame_2 - 0.034 13.5 0.0 0.044 13.2 0.0 1.1 1 0 0 1 1 1 0 Lepidopteran low molecular weight (30 kD) lipoprotein XS PF03468.14 NODE_52081_length_345_cov_2.112903_g44163_i0forward_frame_2 - 0.095 13.0 0.1 0.21 11.9 0.0 1.6 2 0 0 2 2 2 0 XS domain TPR_1 PF00515.28 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_2 - 0.0019 17.9 0.0 0.0031 17.3 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_2 - 0.0039 16.8 0.0 0.0065 16.1 0.0 1.3 1 0 0 1 1 1 1 TPR repeat PDDEXK_3 PF13366.6 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_2 - 0.0058 17.0 0.0 0.0072 16.7 0.0 1.1 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily TPR_2 PF07719.17 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_2 - 0.0059 16.6 0.0 0.0099 15.9 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat IF3_N PF05198.16 NODE_52074_length_345_cov_2.641935_g44156_i0forward_frame_2 - 1.9e-31 108.1 0.2 3e-31 107.5 0.2 1.4 1 0 0 1 1 1 1 Translation initiation factor IF-3, N-terminal domain IF3_C PF00707.22 NODE_52074_length_345_cov_2.641935_g44156_i0forward_frame_2 - 1.1e-11 44.5 0.1 2.8e-11 43.2 0.0 1.7 2 0 0 2 2 2 1 Translation initiation factor IF-3, C-terminal domain DUF3632 PF12311.8 NODE_52074_length_345_cov_2.641935_g44156_i0forward_frame_2 - 0.093 13.2 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3632) UpxZ PF06603.11 NODE_52071_length_345_cov_2.774194_g44153_i0forward_frame_2 - 0.094 13.0 0.2 0.25 11.6 0.1 1.7 2 0 0 2 2 2 0 UpxZ family of transcription anti-terminator antagonists PH_11 PF15413.6 NODE_52071_length_345_cov_2.774194_g44153_i0forward_frame_2 - 0.11 12.9 0.1 0.15 12.5 0.1 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain Prominin PF05478.11 NODE_52069_length_345_cov_2.851613_g44151_i0forward_frame_3 - 1.3 6.9 2.9 1.4 6.8 2.9 1.0 1 0 0 1 1 1 0 Prominin UPF0449 PF15136.6 NODE_52069_length_345_cov_2.851613_g44151_i0forward_frame_2 - 0.056 13.9 0.5 0.072 13.6 0.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 Microcephalin PF12258.8 NODE_52069_length_345_cov_2.851613_g44151_i0forward_frame_2 - 0.63 9.2 4.6 0.7 9.1 4.6 1.0 1 0 0 1 1 1 0 Microcephalin protein QCR10 PF09796.9 NODE_52063_length_345_cov_3.516129_g44145_i0reverse_frame_3 - 0.44 10.7 0.1 0.44 10.7 0.1 1.9 2 0 0 2 2 2 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) Pinin_SDK_memA PF04696.13 NODE_52057_length_345_cov_8.241935_g44139_i0reverse_frame_2 - 0.097 12.7 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region FAM86 PF14904.6 NODE_52057_length_345_cov_8.241935_g44139_i0reverse_frame_2 - 0.13 12.4 1.7 0.21 11.7 0.4 1.8 2 0 0 2 2 2 0 Family of unknown function Phage_integrase PF00589.22 NODE_52056_length_345_cov_8.593548_g44138_i0reverse_frame_2 - 1.8e-24 86.5 0.0 2.1e-24 86.2 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family TTL PF03133.15 NODE_52053_length_345_cov_47.303226_g44135_i0reverse_frame_2 - 6.6e-21 74.7 0.0 8.1e-21 74.4 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_52053_length_345_cov_47.303226_g44135_i0reverse_frame_2 - 7.2e-05 22.2 0.0 9.7e-05 21.7 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_52053_length_345_cov_47.303226_g44135_i0reverse_frame_2 - 0.00098 18.4 0.0 0.0013 18.1 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp Rep_4 PF05797.11 NODE_52049_length_345_cov_55.451613_g44131_i0reverse_frame_3 - 0.096 11.8 0.3 0.11 11.6 0.3 1.1 1 0 0 1 1 1 0 Yeast trans-acting factor (REP1/REP2) TPR_12 PF13424.6 NODE_52049_length_345_cov_55.451613_g44131_i0forward_frame_2 - 4.1e-06 27.0 0.0 0.00018 21.7 0.0 1.7 1 1 1 2 2 2 2 Tetratricopeptide repeat DUF4256 PF14066.6 NODE_52049_length_345_cov_55.451613_g44131_i0forward_frame_2 - 0.13 12.0 0.4 0.2 11.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4256) Polyketide_cyc2 PF10604.9 NODE_52048_length_345_cov_59.296774_g44130_i0reverse_frame_2 - 2.5e-06 27.8 0.0 2.9e-06 27.6 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF3278 PF11683.8 NODE_52045_length_345_cov_66.996774_g44127_i0forward_frame_3 - 0.12 12.4 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3278) DUF5571 PF17732.1 NODE_52043_length_345_cov_69.996774_g44125_i0forward_frame_2 - 0.13 11.7 0.2 0.15 11.5 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5571) Smr PF01713.21 NODE_52042_length_345_cov_70.332258_g44124_i0forward_frame_2 - 0.0018 18.6 0.0 0.0022 18.3 0.0 1.2 1 0 0 1 1 1 1 Smr domain HSP70 PF00012.20 NODE_52039_length_345_cov_74.780645_g44121_i0reverse_frame_2 - 1.2e-36 126.1 1.6 1.3e-36 126.0 1.6 1.0 1 0 0 1 1 1 1 Hsp70 protein NAD-GH PF10712.9 NODE_52039_length_345_cov_74.780645_g44121_i0forward_frame_3 - 7.6e-22 77.5 1.3 9.3e-22 77.2 1.3 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Acetyltransf_6 PF13480.7 NODE_52036_length_345_cov_77.574194_g44118_i0reverse_frame_3 - 0.03 14.5 0.1 0.035 14.3 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF3515 PF12028.8 NODE_52036_length_345_cov_77.574194_g44118_i0reverse_frame_2 - 0.14 11.9 1.5 0.21 11.3 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3515) 3HCDH PF00725.22 NODE_52035_length_345_cov_80.580645_g44117_i0forward_frame_3 - 7.4e-13 48.9 0.0 1.2e-12 48.3 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AbiEi_3_N PF17194.4 NODE_52035_length_345_cov_80.580645_g44117_i0forward_frame_3 - 0.11 12.5 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin N-terminal domain Beta-TrCP_D PF12125.8 NODE_52034_length_345_cov_83.632258_g44116_i0forward_frame_3 - 0.065 13.1 0.3 0.12 12.2 0.3 1.4 1 0 0 1 1 1 0 D domain of beta-TrCP MgtE PF01769.16 NODE_52033_length_345_cov_90.516129_g44115_i0reverse_frame_2 - 0.0041 17.5 0.8 0.0047 17.3 0.8 1.1 1 0 0 1 1 1 1 Divalent cation transporter CSD PF00313.22 NODE_52030_length_345_cov_108.929032_g44112_i0reverse_frame_3 - 2.4e-08 33.7 1.1 3.3e-08 33.3 1.1 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain PH_12 PF16457.5 NODE_52023_length_345_cov_138.925806_g44105_i0reverse_frame_2 - 0.038 14.5 0.3 0.044 14.3 0.3 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain zf-Tim10_DDP PF02953.15 NODE_52017_length_345_cov_322.738710_g44099_i0reverse_frame_2 - 0.048 13.3 1.2 0.098 12.3 0.3 1.8 1 1 1 2 2 2 0 Tim10/DDP family zinc finger DUF5496 PF17600.2 NODE_52017_length_345_cov_322.738710_g44099_i0reverse_frame_2 - 0.18 11.8 1.8 8.2 6.5 0.1 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5496) DUF1418 PF07214.12 NODE_52016_length_345_cov_975.754839_g39796_i1reverse_frame_2 - 0.024 14.5 0.9 0.034 14.0 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) PTN_MK_N PF05196.13 ORF99821 - 0.097 12.9 0.0 0.18 12.1 0.0 1.4 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, N-terminal domain 5_3_exonuc_N PF02739.16 ORF99632 - 0.093 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain DUF202 PF02656.15 ORF99531 - 4.9e-05 23.7 10.6 0.00042 20.7 10.6 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF202) DUF4231 PF14015.6 ORF99531 - 0.27 11.7 3.0 0.7 10.4 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) PetG PF02529.15 ORF99531 - 0.33 10.9 5.3 1.5 8.7 0.0 2.5 3 0 0 3 3 3 0 Cytochrome B6-F complex subunit 5 DUF4395 PF14340.6 ORF99531 - 8.9 6.7 11.5 14 6.0 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4395) Fe-S_biosyn PF01521.20 ORF9879 - 1e-20 73.9 0.0 1.2e-20 73.8 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis Ribosomal_L39 PF00832.20 ORF98495 - 0.026 14.2 3.0 0.046 13.4 3.0 1.3 1 0 0 1 1 1 0 Ribosomal L39 protein ODR4-like PF14778.6 ORF97731 - 0.2 10.6 0.1 0.24 10.3 0.1 1.0 1 0 0 1 1 1 0 Olfactory receptor 4-like TFIID_30kDa PF03540.13 ORF97022 - 0.0015 18.5 0.1 0.003 17.5 0.0 1.6 2 0 0 2 2 2 1 Transcription initiation factor TFIID 23-30kDa subunit MKT1_C PF12246.8 ORF97022 - 0.015 14.6 0.0 0.021 14.1 0.0 1.1 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication TAF4 PF05236.14 ORF97022 - 0.056 13.2 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family tRNA_anti-like PF12869.7 ORF96557 - 0.096 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 tRNA_anti-like WW PF00397.26 ORF96557 - 0.11 12.6 0.0 0.11 12.6 0.0 1.8 2 0 0 2 2 2 0 WW domain APH PF01636.23 ORF96467 - 0.0041 17.1 0.5 0.005 16.8 0.5 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Ribosomal_L39 PF00832.20 ORF96319 - 0.026 14.2 3.0 0.046 13.4 3.0 1.3 1 0 0 1 1 1 0 Ribosomal L39 protein DUF5034 PF16437.5 ORF95887 - 0.065 13.2 0.1 0.09 12.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5034) MPC PF03650.13 ORF95384 - 1.6e-33 115.1 1.2 1.8e-33 114.9 1.2 1.0 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers DSPc PF00782.20 ORF95225 - 0.0023 17.8 1.4 0.0044 16.8 0.4 1.7 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain DUF1189 PF06691.11 ORF95225 - 0.042 13.4 3.2 0.044 13.4 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) Cytochrom_B562 PF07361.11 ORF94117 - 0.041 14.5 0.3 0.055 14.1 0.3 1.3 1 0 0 1 1 1 0 Cytochrome b562 InvH PF04741.12 ORF94117 - 0.048 13.6 0.4 0.054 13.4 0.4 1.1 1 0 0 1 1 1 0 InvH outer membrane lipoprotein TonB_C PF03544.14 ORF94117 - 0.12 12.8 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 Gram-negative bacterial TonB protein C-terminal TetR_C_17 PF17922.1 ORF94117 - 0.17 12.0 3.1 0.1 12.7 0.8 1.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain YkuD PF03734.14 ORF94084 - 0.13 12.7 0.1 0.18 12.2 0.1 1.4 1 1 0 1 1 1 0 L,D-transpeptidase catalytic domain UPF0240 PF06784.11 ORF94021 - 0.015 15.3 0.5 0.019 15.1 0.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0240) DUF4665 PF15679.5 ORF94021 - 0.023 15.3 2.2 0.029 15.0 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4665) Peptidase_S46 PF10459.9 ORF94021 - 0.071 11.8 0.3 0.079 11.6 0.3 1.0 1 0 0 1 1 1 0 Peptidase S46 DUF1320 PF07030.12 ORF94021 - 0.084 13.0 0.1 0.2 11.8 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1320) Peptidase_M1 PF01433.20 ORF93939 - 9.1e-29 100.6 0.3 1.1e-28 100.4 0.3 1.1 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M61 PF05299.12 ORF93939 - 0.0007 20.0 1.1 0.027 14.9 1.1 2.1 1 1 0 1 1 1 1 M61 glycyl aminopeptidase Peptidase_MA_2 PF13485.6 ORF93939 - 0.048 13.3 0.1 0.059 13.0 0.1 1.1 1 0 0 1 1 1 0 Peptidase MA superfamily DUF4932 PF16286.5 ORF93939 - 0.097 11.9 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4932) Rrn6 PF10214.9 ORF93686 - 0.074 11.5 6.4 0.078 11.5 6.4 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor TipAS PF07739.13 ORF93686 - 0.11 13.0 1.9 0.15 12.6 1.9 1.1 1 0 0 1 1 1 0 TipAS antibiotic-recognition domain CCDC-167 PF15188.6 ORF93686 - 2.3 8.6 4.9 3.4 8.1 4.9 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Mito_fiss_reg PF05308.11 ORF93370 - 0.014 15.5 10.8 0.018 15.1 10.8 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 ORF93370 - 0.097 12.1 15.3 0.12 11.9 15.3 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal PRIMA1 PF16101.5 ORF93370 - 0.22 11.6 12.3 0.29 11.2 12.3 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 DUF1180 PF06679.12 ORF93370 - 0.53 10.7 4.4 0.58 10.6 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) CCDC53 PF10152.9 ORF93370 - 0.59 10.5 4.7 0.8 10.1 4.7 1.3 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex Porphyrn_cat_1 PF18206.1 ORF93296 - 0.13 12.9 4.5 0.18 12.4 4.5 1.2 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 Ribosomal_L39 PF00832.20 ORF93149 - 0.026 14.2 3.0 0.046 13.4 3.0 1.3 1 0 0 1 1 1 0 Ribosomal L39 protein C_Hendra PF16821.5 ORF92418 - 0.0086 16.0 5.2 0.011 15.6 5.2 1.3 1 1 0 1 1 1 1 C protein from hendra and measles viruses PAH PF02671.21 ORF91506 - 0.015 15.4 2.1 0.018 15.2 2.1 1.5 1 1 0 1 1 1 0 Paired amphipathic helix repeat GSHPx PF00255.19 ORF9061 - 0.0015 18.1 0.0 0.002 17.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione peroxidase TraL PF07178.11 ORF89119 - 0.027 14.9 2.0 0.037 14.5 1.7 1.4 1 1 0 1 1 1 0 TraL protein DUF2451 PF10474.9 ORF88825 - 0.0068 16.2 0.0 0.0076 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function C-terminus (DUF2451) SRP-alpha_N PF04086.13 ORF876 - 0.42 10.5 15.7 0.47 10.3 15.7 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal T3SS_needle_F PF09392.10 ORF876 - 0.63 10.3 0.0 0.63 10.3 0.0 3.2 1 1 2 3 3 3 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF Asp-B-Hydro_N PF05279.11 ORF876 - 4.1 7.4 27.1 5.2 7.1 27.1 1.0 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DUF1676 PF07898.13 ORF876 - 7.8 6.5 7.0 8.9 6.3 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) Lambda_CIII PF02061.16 ORF87211 - 0.1 12.7 0.0 0.23 11.5 0.0 1.6 2 0 0 2 2 2 0 Lambda Phage CIII DUF148 PF02520.17 ORF8716 - 0.0021 18.1 15.3 0.0021 18.1 15.3 1.4 1 1 0 1 1 1 1 Domain of unknown function DUF148 Rotamase_2 PF13145.6 ORF8716 - 0.011 16.5 5.3 0.013 16.3 5.3 1.1 1 0 0 1 1 1 0 PPIC-type PPIASE domain Lipase_chap PF03280.14 ORF8716 - 0.17 11.8 0.4 0.17 11.8 0.4 2.1 1 1 1 2 2 2 0 Proteobacterial lipase chaperone protein Rootletin PF15035.6 ORF8716 - 0.59 10.1 17.2 0.29 11.1 15.0 1.5 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion PDDEXK_6 PF04720.12 ORF8716 - 3.6 7.5 12.3 4.1 7.3 12.3 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function TMPIT PF07851.13 ORF8716 - 6.9 5.8 15.6 8.2 5.6 15.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein Sen15 PF09631.10 ORF86635 - 0.052 13.8 0.2 0.069 13.5 0.2 1.2 1 0 0 1 1 1 0 Sen15 protein LTD PF00932.19 ORF85961 - 0.022 15.1 0.0 0.031 14.6 0.0 1.4 1 0 0 1 1 1 0 Lamin Tail Domain Cytochrom_C PF00034.21 ORF83649 - 8.9e-15 55.6 0.1 1.2e-14 55.1 0.1 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF83649 - 3.8e-07 30.3 1.7 9.5e-07 29.1 1.7 1.6 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF83649 - 0.00068 19.4 0.1 0.0024 17.6 0.0 1.8 2 0 0 2 2 2 1 Cytochrome c-550 domain Cytochrome_P460 PF16694.5 ORF83649 - 0.074 13.4 0.4 1.9 8.8 0.1 2.0 2 0 0 2 2 2 0 Cytochrome P460 LLC1 PF14945.6 ORF8307 - 0.054 14.1 0.0 0.067 13.8 0.0 1.1 1 0 0 1 1 1 0 Normal lung function maintenance, Low in Lung Cancer 1 protein Cpn60_TCP1 PF00118.24 ORF82797 - 7.4e-31 107.3 0.4 8e-31 107.2 0.4 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF3439 PF11921.8 ORF82169 - 0.057 13.4 0.5 0.089 12.8 0.1 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) DAOA PF15199.6 ORF81904 - 0.073 13.5 0.0 0.25 11.8 0.0 1.7 1 1 0 1 1 1 0 D-amino acid oxidase activator TetR_C_4 PF08359.11 ORF81795 - 0.017 15.3 0.3 0.02 15.0 0.3 1.1 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region Methyltransf_PK PF05891.12 ORF81795 - 0.056 12.9 0.4 0.056 12.9 0.4 1.9 1 1 1 2 2 2 0 AdoMet dependent proline di-methyltransferase DUF2714 PF10896.8 ORF81264 - 0.0088 16.1 0.3 0.011 15.8 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2714) Death_2 PF14786.6 ORF81264 - 0.036 14.0 0.1 0.067 13.1 0.1 1.5 1 1 1 2 2 2 0 Tube Death domain RES PF08808.11 ORF80815 - 0.0071 16.2 0.0 0.0093 15.9 0.0 1.1 1 0 0 1 1 1 1 RES domain DUF765 PF05570.11 ORF80254 - 0.031 14.5 0.1 0.065 13.4 0.1 1.5 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF765) DUF2045 PF09741.9 ORF79468 - 0.2 11.0 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2045) UL41A PF17591.2 ORF79465 - 1.3 9.2 4.6 3.1 7.9 0.2 2.3 2 0 0 2 2 2 0 Herpesvirus UL41A ERGIC_N PF13850.6 ORF79288 - 0.0016 18.7 0.1 0.002 18.4 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TCO89 PF10452.9 ORF79255 - 0.0026 16.8 0.4 0.0026 16.8 0.4 1.0 1 0 0 1 1 1 1 TORC1 subunit TCO89 Hat1_N PF10394.9 ORF79255 - 0.0037 17.5 0.3 0.005 17.1 0.3 1.3 1 1 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus Peptidase_M50B PF13398.6 ORF78470 - 0.011 15.3 2.3 0.012 15.2 2.3 1.1 1 0 0 1 1 1 0 Peptidase M50B-like C_Hendra PF16821.5 ORF78461 - 0.0086 16.0 5.2 0.011 15.6 5.2 1.3 1 1 0 1 1 1 1 C protein from hendra and measles viruses CLLAC PF15675.5 ORF78171 - 0.77 9.4 4.2 2 8.1 4.2 1.7 1 0 0 1 1 1 0 CLLAC-motif containing domain LRR_5 PF13306.6 ORF77965 - 0.021 14.8 0.4 0.048 13.6 0.1 1.6 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) Fae PF08714.11 ORF77965 - 0.11 12.4 0.5 0.2 11.6 0.2 1.5 2 0 0 2 2 2 0 Formaldehyde-activating enzyme (Fae) Zn_peptidase_2 PF04298.12 ORF77813 - 0.59 9.5 5.9 0.48 9.8 5.2 1.3 1 1 0 1 1 1 0 Putative neutral zinc metallopeptidase DUF818 PF05677.12 ORF77813 - 2.4 7.0 8.8 2.8 6.8 8.8 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) MFS_1 PF07690.16 ORF77399 - 4.9e-08 32.3 6.1 5.2e-08 32.2 6.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily EamA PF00892.20 ORF77350 - 7e-08 32.7 5.1 8.8e-08 32.4 5.1 1.1 1 0 0 1 1 1 1 EamA-like transporter family UAA PF08449.11 ORF77350 - 0.0027 17.0 3.6 0.003 16.8 3.6 1.1 1 0 0 1 1 1 1 UAA transporter family EmrE PF13536.6 ORF77350 - 0.0096 15.5 1.8 0.012 15.2 1.8 1.2 1 0 0 1 1 1 1 Putative multidrug resistance efflux transporter CRT-like PF08627.10 ORF77350 - 0.013 14.5 5.1 0.015 14.2 5.1 1.1 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like TraQ PF09679.10 ORF77350 - 0.14 12.1 0.4 0.55 10.2 0.2 1.9 2 0 0 2 2 2 0 Type-F conjugative transfer system pilin chaperone (TraQ) DUF515 PF04415.12 ORF76222 - 0.5 8.7 2.4 0.66 8.3 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Amidohydro_3 PF07969.11 ORF75895 - 0.0037 16.8 0.3 0.0047 16.5 0.3 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 ORF75895 - 0.16 11.3 0.1 0.18 11.1 0.1 1.1 1 0 0 1 1 1 0 Amidohydrolase family DUF5549 PF17703.1 ORF75772 - 0.055 13.1 1.5 0.06 13.0 1.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5549) MASE1 PF05231.14 ORF75070 - 0.023 13.8 5.3 0.032 13.4 5.3 1.2 1 0 0 1 1 1 0 MASE1 EF-hand_1 PF00036.32 ORF74121 - 5.6e-18 63.1 7.4 3.2e-09 35.7 1.4 2.4 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF74121 - 4.6e-15 54.2 4.8 2.4e-08 33.2 0.2 3.0 2 1 1 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF74121 - 2e-14 53.8 2.9 3e-14 53.2 2.9 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF74121 - 2.8e-11 43.1 4.8 1.5e-10 40.7 1.0 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF74121 - 1.4e-06 27.6 6.9 0.00058 19.2 1.6 2.7 2 1 1 3 3 3 2 EF hand EF-hand_9 PF14658.6 ORF74121 - 0.00057 20.2 0.1 0.00078 19.7 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain EF-hand_14 PF17959.1 ORF74121 - 0.00094 19.5 0.7 0.00094 19.5 0.7 1.9 1 1 1 2 2 2 1 EF-hand domain Peptidase_S46 PF10459.9 ORF74121 - 0.0023 16.7 3.7 0.0025 16.6 3.7 1.0 1 0 0 1 1 1 1 Peptidase S46 EF-hand_4 PF12763.7 ORF74121 - 0.0081 16.1 1.8 0.061 13.3 1.6 2.0 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand UPF0154 PF03672.13 ORF74121 - 0.012 15.6 1.4 0.26 11.4 0.0 2.3 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0154) DUF1002 PF06207.11 ORF74121 - 0.013 15.0 2.1 0.15 11.6 1.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1002) SPARC_Ca_bdg PF10591.9 ORF74121 - 0.016 15.5 1.3 0.021 15.1 1.3 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Acetyltransf_11 PF13720.6 ORF74121 - 0.063 13.7 0.2 0.13 12.8 0.2 1.5 1 1 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SAP PF02037.27 ORF74121 - 0.077 12.8 0.9 3 7.7 0.0 3.0 2 1 1 3 3 3 0 SAP domain C_Hendra PF16821.5 ORF73549 - 0.0086 16.0 5.2 0.011 15.6 5.2 1.3 1 1 0 1 1 1 1 C protein from hendra and measles viruses MipZ PF09140.11 ORF73214 - 0.013 14.8 0.7 0.016 14.5 0.7 1.1 1 0 0 1 1 1 0 ATPase MipZ RabGAP-TBC PF00566.18 ORF73136 - 1.5e-24 86.9 1.6 2.9e-24 85.9 1.6 1.4 1 1 0 1 1 1 1 Rab-GTPase-TBC domain Arf PF00025.21 ORF72140 - 3e-45 153.8 0.1 3.3e-45 153.7 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 ORF72140 - 8.7e-06 25.4 0.0 9.1e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF72140 - 0.00023 20.6 0.0 0.00025 20.5 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF72140 - 0.00029 21.0 0.0 0.00039 20.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 ORF72140 - 0.0016 17.7 0.0 0.003 16.8 0.0 1.4 1 1 0 1 1 1 1 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF72140 - 0.021 14.2 0.0 0.022 14.1 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region SRP-alpha_N PF04086.13 ORF71258 - 0.42 10.5 15.7 0.47 10.3 15.7 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal T3SS_needle_F PF09392.10 ORF71258 - 0.63 10.3 0.0 0.63 10.3 0.0 3.2 1 1 2 3 3 3 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF Asp-B-Hydro_N PF05279.11 ORF71258 - 4.1 7.4 27.1 5.2 7.1 27.1 1.0 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DUF1676 PF07898.13 ORF71258 - 7.8 6.5 7.0 8.9 6.3 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) Tektin PF03148.14 ORF70846 - 0.00086 18.2 9.7 0.0011 17.9 9.7 1.2 1 0 0 1 1 1 1 Tektin family Golgin_A5 PF09787.9 ORF70846 - 0.0011 18.5 13.7 0.0013 18.3 13.7 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 V_ATPase_I PF01496.19 ORF70846 - 0.0022 16.0 8.5 0.0024 15.9 8.5 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family FlxA PF14282.6 ORF70846 - 0.0098 15.9 19.0 0.019 14.9 18.8 1.5 1 1 0 1 1 1 1 FlxA-like protein Fmp27_WPPW PF10359.9 ORF70846 - 0.011 14.7 9.4 0.011 14.6 9.4 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Prefoldin_2 PF01920.20 ORF70846 - 0.013 15.4 15.7 0.066 13.2 7.3 2.3 1 1 1 2 2 2 0 Prefoldin subunit PI3K_P85_iSH2 PF16454.5 ORF70846 - 0.013 15.1 11.9 0.06 12.9 11.9 1.8 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain APG6_N PF17675.1 ORF70846 - 0.016 15.7 8.4 0.021 15.3 8.4 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region FlaC_arch PF05377.11 ORF70846 - 0.032 14.6 10.7 0.74 10.3 1.8 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Laminin_II PF06009.12 ORF70846 - 0.033 14.2 7.6 0.043 13.8 7.6 1.2 1 0 0 1 1 1 0 Laminin Domain II Snapin_Pallidin PF14712.6 ORF70846 - 0.038 14.4 7.6 0.28 11.7 1.2 2.4 1 1 0 2 2 2 0 Snapin/Pallidin DUF3450 PF11932.8 ORF70846 - 0.039 13.3 9.2 0.05 12.9 9.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TPR_MLP1_2 PF07926.12 ORF70846 - 0.044 13.8 11.4 0.045 13.8 10.7 1.4 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein DASH_Spc19 PF08287.11 ORF70846 - 0.045 13.7 5.9 0.055 13.4 5.9 1.1 1 0 0 1 1 1 0 Spc19 STAT_alpha PF01017.20 ORF70846 - 0.049 13.5 11.5 0.062 13.2 11.5 1.1 1 0 0 1 1 1 0 STAT protein, all-alpha domain TEX13 PF15186.6 ORF70846 - 0.059 13.1 5.9 0.083 12.6 5.9 1.2 1 0 0 1 1 1 0 Testis-expressed sequence 13 protein family Fib_alpha PF08702.10 ORF70846 - 0.068 13.4 15.7 0.08 13.1 15.7 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4200 PF13863.6 ORF70846 - 0.1 13.0 17.8 0.12 12.8 17.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) PRKG1_interact PF15898.5 ORF70846 - 0.11 13.4 8.3 0.16 12.9 8.3 1.2 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain CENP-H PF05837.12 ORF70846 - 0.12 12.8 10.3 0.11 13.0 9.0 1.5 1 1 1 2 2 2 0 Centromere protein H (CENP-H) COG5 PF10392.9 ORF70846 - 0.2 11.8 7.1 1 9.5 2.0 2.2 1 1 1 2 2 2 0 Golgi transport complex subunit 5 Syntaxin-6_N PF09177.11 ORF70846 - 0.21 12.2 10.1 1.8 9.2 10.1 1.9 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF2203 PF09969.9 ORF70846 - 0.27 12.0 4.6 0.37 11.5 4.6 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF2205 PF10224.9 ORF70846 - 0.29 11.2 10.8 0.071 13.1 2.3 2.2 1 1 1 2 2 2 0 Short coiled-coil protein DUF4140 PF13600.6 ORF70846 - 0.3 11.6 8.9 0.88 10.0 5.0 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF724 PF05266.14 ORF70846 - 0.35 10.7 10.4 0.45 10.3 10.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) TMPIT PF07851.13 ORF70846 - 0.43 9.8 7.7 0.57 9.4 7.7 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF948 PF06103.11 ORF70846 - 0.53 10.6 9.5 2.6 8.4 3.1 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Allexi_40kDa PF05549.11 ORF70846 - 0.71 9.3 4.3 0.74 9.3 4.3 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein Csm1_N PF18504.1 ORF70846 - 0.74 10.2 14.3 2.9 8.3 5.0 2.6 1 1 2 3 3 3 0 Csm1 N-terminal domain Sec2p PF06428.11 ORF70846 - 0.8 9.7 10.9 0.42 10.6 4.2 2.3 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p YabA PF06156.13 ORF70846 - 0.91 10.2 8.5 5.4 7.7 1.1 2.2 1 1 1 2 2 2 0 Initiation control protein YabA ABC_tran_CTD PF16326.5 ORF70846 - 0.92 9.8 10.4 2.3 8.6 4.4 2.5 1 1 1 2 2 2 0 ABC transporter C-terminal domain BCAS2 PF05700.11 ORF70846 - 0.96 9.1 9.5 0.61 9.8 4.1 2.0 1 1 1 2 2 2 0 Breast carcinoma amplified sequence 2 (BCAS2) UPF0242 PF06785.11 ORF70846 - 1.2 9.2 14.7 1.7 8.7 14.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Flagellin_C PF00700.21 ORF70846 - 1.3 9.4 7.7 0.49 10.8 3.0 2.1 1 1 1 2 2 2 0 Bacterial flagellin C-terminal helical region COG2 PF06148.11 ORF70846 - 1.3 9.1 7.3 9.5 6.3 1.5 2.1 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF1664 PF07889.12 ORF70846 - 1.3 9.0 11.1 1.9 8.6 9.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Atg14 PF10186.9 ORF70846 - 1.7 7.7 13.2 2.9 6.9 13.2 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TolA_bind_tri PF16331.5 ORF70846 - 1.7 8.8 12.1 5.3 7.2 0.5 2.3 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF4407 PF14362.6 ORF70846 - 2 7.7 7.3 2.4 7.4 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF70846 - 2.1 9.0 10.5 0.77 10.4 0.4 2.7 1 1 2 3 3 3 0 SlyX CCDC-167 PF15188.6 ORF70846 - 2.2 8.7 9.4 4 7.9 9.0 1.8 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF4446 PF14584.6 ORF70846 - 4.7 7.2 9.2 8.6 6.3 3.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) LMBR1 PF04791.16 ORF70846 - 7.1 5.4 10.4 7.6 5.3 10.4 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein MIP-T3_C PF17749.1 ORF70846 - 8.8 6.3 21.8 1.6e+02 2.1 21.9 2.3 1 1 0 1 1 1 0 Microtubule-binding protein MIP-T3 C-terminal region TetR_C_4 PF08359.11 ORF70023 - 0.15 12.2 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region Ribosomal_60s PF00428.19 ORF69912 - 1.5e-19 70.4 4.4 1.7e-19 70.2 4.4 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein Glyco_hydro_1 PF00232.18 ORF67816 - 0.016 13.6 0.4 0.018 13.5 0.4 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 1 RELT PF12606.8 ORF67600 - 0.0044 16.0 0.5 0.0097 14.9 0.5 1.6 1 1 0 1 1 1 1 Tumour necrosis factor receptor superfamily member 19 DUF1244 PF06844.11 ORF6756 - 0.17 12.0 0.1 0.35 11.1 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1244) BioT2 PF15368.6 ORF67187 - 0.041 13.8 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Spermatogenesis family BioT2 ATXN-1_C PF12547.8 ORF66957 - 0.18 12.2 1.5 0.33 11.3 1.5 1.4 1 0 0 1 1 1 0 Capicua transcriptional repressor modulator COG2 PF06148.11 ORF65996 - 0.0093 16.1 1.0 0.45 10.6 0.1 2.2 1 1 1 2 2 2 1 COG (conserved oligomeric Golgi) complex component, COG2 DUF5470 PF17564.2 ORF65996 - 0.027 14.7 1.0 0.11 12.7 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5470) Prominin PF05478.11 ORF65996 - 0.054 11.5 3.8 0.064 11.2 3.8 1.1 1 0 0 1 1 1 0 Prominin DUF1664 PF07889.12 ORF65996 - 0.078 13.0 3.1 0.12 12.4 3.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Hemagglutinin PF00509.18 ORF65996 - 0.096 11.1 2.2 0.1 11.0 2.2 1.1 1 0 0 1 1 1 0 Haemagglutinin Phage_GP20 PF06810.11 ORF65996 - 0.12 12.2 8.8 0.13 12.0 8.8 1.1 1 0 0 1 1 1 0 Phage minor structural protein GP20 KH_5 PF13184.6 ORF65996 - 0.13 12.4 0.7 0.8 9.8 0.1 2.1 2 0 0 2 2 2 0 NusA-like KH domain Pox_P35 PF03213.14 ORF65996 - 0.14 11.4 6.5 0.43 9.7 2.1 2.0 1 1 1 2 2 2 0 Poxvirus P35 protein Tup_N PF08581.10 ORF65996 - 0.14 12.5 6.9 0.51 10.7 2.2 2.5 2 1 0 2 2 2 0 Tup N-terminal Spore_GerAC PF05504.11 ORF65996 - 0.33 11.1 6.5 0.64 10.2 6.5 1.5 1 1 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal LMP PF04778.12 ORF65996 - 0.53 10.2 9.4 0.62 10.0 8.9 1.4 1 1 0 1 1 1 0 LMP repeated region DUF1506 PF07405.11 ORF65769 - 0.02 15.0 0.1 0.022 14.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1506) Ribosomal_L27A PF00828.19 ORF65134 - 9.3e-17 61.9 0.0 1e-16 61.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DUF4886 PF16227.5 ORF64352 - 4.5e-06 26.0 0.0 5.2e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4886) Biopterin_H PF00351.21 ORF63522 - 0.086 11.9 2.0 0.099 11.7 2.0 1.1 1 0 0 1 1 1 0 Biopterin-dependent aromatic amino acid hydroxylase SUR7 PF06687.12 ORF6276 - 0.0046 16.6 3.4 0.0049 16.5 3.4 1.0 1 0 0 1 1 1 1 SUR7/PalI family PTPLA PF04387.14 ORF6276 - 0.23 11.2 5.9 0.32 10.7 5.9 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA BPD_transp_1 PF00528.22 ORF62575 - 2.2e-27 96.0 3.3 2.5e-27 95.8 3.3 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component TBCA PF02970.16 ORF62354 - 2.6e-22 78.9 3.6 3.4e-22 78.6 3.6 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A DUF4298 PF14131.6 ORF62354 - 0.021 14.8 0.7 0.086 12.8 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) ApoL PF05461.11 ORF62354 - 0.024 14.0 0.3 0.024 14.0 0.3 1.1 1 0 0 1 1 1 0 Apolipoprotein L RasGAP_C PF03836.15 ORF62354 - 0.024 14.8 4.2 0.22 11.6 0.7 2.1 1 1 1 2 2 2 0 RasGAP C-terminus T3SchapCesA PF11439.8 ORF62354 - 0.16 12.1 2.5 5.7 7.1 0.2 2.0 1 1 1 2 2 2 0 Type III secretion system filament chaperone CesA BCNT PF07572.12 ORF62354 - 0.26 11.4 1.7 0.25 11.4 0.4 1.6 2 0 0 2 2 2 0 Bucentaur or craniofacial development Peptidase_M1 PF01433.20 ORF61827 - 9.1e-29 100.6 0.3 1.1e-28 100.4 0.3 1.1 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M61 PF05299.12 ORF61827 - 0.0007 20.0 1.1 0.027 14.9 1.1 2.1 1 1 0 1 1 1 1 M61 glycyl aminopeptidase Peptidase_MA_2 PF13485.6 ORF61827 - 0.048 13.3 0.1 0.059 13.0 0.1 1.1 1 0 0 1 1 1 0 Peptidase MA superfamily DUF4932 PF16286.5 ORF61827 - 0.097 11.9 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4932) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks205.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks205.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks205.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks205.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DAPDH_C PF16654.5 ORF61418 - 0.053 13.4 0.2 0.053 13.4 0.2 1.2 1 0 0 1 1 1 0 Diaminopimelic acid dehydrogenase C-terminal domain DUF4349 PF14257.6 ORF61418 - 0.054 12.9 0.1 0.072 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Endonuc-dimeris PF09124.10 ORF61418 - 0.19 11.9 3.0 18 5.6 0.0 2.5 2 0 0 2 2 2 0 T4 recombination endonuclease VII, dimerisation PK_C PF02887.16 ORF61271 - 3e-29 101.6 0.3 3.3e-29 101.5 0.3 1.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain DUF5637 PF18687.1 ORF60856 - 0.047 13.7 0.5 0.075 13.0 0.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5637) DUF1298 PF06974.13 ORF6079 - 0.00013 22.0 0.0 0.00013 21.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Oxidored_q5_N PF01059.17 ORF6066 - 1.1 9.3 9.6 2.3 8.3 9.5 1.6 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus RseC_MucC PF04246.12 ORF6066 - 1.5 8.8 4.9 1.1 9.2 1.0 2.0 1 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Inhibitor_I67 PF11405.8 ORF60472 - 0.077 13.3 0.1 0.13 12.6 0.1 1.3 1 0 0 1 1 1 0 Bromelain inhibitor VI Acyl_transf_3 PF01757.22 ORF59432 - 0.088 11.8 5.9 0.11 11.5 5.9 1.1 1 0 0 1 1 1 0 Acyltransferase family Totivirus_coat PF05518.11 ORF587 - 0.78 7.7 3.9 0.9 7.5 3.9 1.0 1 0 0 1 1 1 0 Totivirus coat protein Ribosomal_L39 PF00832.20 ORF58132 - 0.026 14.2 3.0 0.046 13.4 3.0 1.3 1 0 0 1 1 1 0 Ribosomal L39 protein BRE1 PF08647.11 ORF57651 - 2.2e-05 24.4 5.1 2.8e-05 24.1 5.1 1.2 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase DUF3450 PF11932.8 ORF57651 - 7.9e-05 22.1 5.7 9.3e-05 21.8 5.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Spc7 PF08317.11 ORF57651 - 0.00025 20.0 3.6 0.00028 19.9 3.6 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 ORF57651 - 0.001 19.6 6.6 0.0013 19.2 6.6 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region FmiP_Thoc5 PF09766.9 ORF57651 - 0.0018 17.6 1.5 0.0024 17.3 1.5 1.2 1 0 0 1 1 1 1 Fms-interacting protein/Thoc5 Tropomyosin PF00261.20 ORF57651 - 0.0033 16.9 4.8 0.0042 16.5 4.8 1.1 1 0 0 1 1 1 1 Tropomyosin Atg14 PF10186.9 ORF57651 - 0.0034 16.5 1.0 0.0037 16.4 1.0 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4164 PF13747.6 ORF57651 - 0.0035 17.6 4.9 0.0045 17.2 4.4 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) Seryl_tRNA_N PF02403.22 ORF57651 - 0.0054 16.9 6.4 0.0074 16.5 6.4 1.1 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain FapA PF03961.13 ORF57651 - 0.0062 15.2 2.8 0.0066 15.1 2.8 1.1 1 0 0 1 1 1 1 Flagellar Assembly Protein A IFT57 PF10498.9 ORF57651 - 0.0072 15.3 3.0 0.0076 15.3 3.0 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Muted PF14942.6 ORF57651 - 0.0093 16.3 4.7 0.012 16.0 4.7 1.1 1 0 0 1 1 1 1 Organelle biogenesis, Muted-like protein TMF_TATA_bd PF12325.8 ORF57651 - 0.01 16.1 6.2 0.013 15.8 6.2 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Tropomyosin_1 PF12718.7 ORF57651 - 0.011 15.9 4.8 0.014 15.5 4.8 1.1 1 0 0 1 1 1 0 Tropomyosin like DUF3782 PF12644.7 ORF57651 - 0.014 15.5 1.7 0.025 14.7 1.3 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3782) CEP209_CC5 PF16574.5 ORF57651 - 0.018 15.2 3.6 0.023 14.8 3.6 1.3 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 FemAB PF02388.16 ORF57651 - 0.022 13.7 2.0 0.026 13.4 2.0 1.1 1 0 0 1 1 1 0 FemAB family JIP_LZII PF16471.5 ORF57651 - 0.022 14.9 4.7 0.022 14.9 4.7 1.9 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II COG2 PF06148.11 ORF57651 - 0.023 14.8 1.1 0.033 14.3 1.1 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DASH_Dad1 PF08649.10 ORF57651 - 0.027 14.6 3.6 0.033 14.4 0.6 2.6 1 1 2 3 3 3 0 DASH complex subunit Dad1 HemX PF04375.14 ORF57651 - 0.033 13.5 2.7 0.04 13.2 2.7 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF1664 PF07889.12 ORF57651 - 0.046 13.8 4.2 1.3 9.1 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) MogR_DNAbind PF12181.8 ORF57651 - 0.048 13.6 4.6 0.06 13.2 4.6 1.0 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) DUF4140 PF13600.6 ORF57651 - 0.057 13.9 1.5 0.081 13.4 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) TMPIT PF07851.13 ORF57651 - 0.089 12.0 3.6 0.1 11.8 3.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein PI3K_P85_iSH2 PF16454.5 ORF57651 - 0.093 12.3 7.3 0.15 11.7 5.9 1.7 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain NPV_P10 PF05531.12 ORF57651 - 0.096 13.2 4.6 0.16 12.5 4.6 1.4 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein THOC7 PF05615.13 ORF57651 - 0.14 12.5 7.7 0.27 11.5 7.7 1.6 1 1 0 1 1 1 0 Tho complex subunit 7 ABC_tran_CTD PF16326.5 ORF57651 - 0.15 12.3 8.7 0.19 12.0 8.1 1.5 1 1 0 1 1 1 0 ABC transporter C-terminal domain CLZ PF16526.5 ORF57651 - 0.2 12.1 5.1 0.7 10.3 2.9 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels PI_PP_I PF18363.1 ORF57651 - 0.21 11.8 2.3 2.9 8.1 2.3 2.0 1 1 0 1 1 1 0 Phosphoinositide phosphatase insertion domain DHR10 PF18595.1 ORF57651 - 0.3 11.2 10.0 0.29 11.2 8.9 1.6 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Syntaxin-6_N PF09177.11 ORF57651 - 0.32 11.6 4.2 0.81 10.3 4.2 1.8 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Prefoldin PF02996.17 ORF57651 - 0.33 10.9 8.3 0.67 9.9 4.0 2.2 1 1 1 2 2 2 0 Prefoldin subunit Spc24 PF08286.11 ORF57651 - 0.56 10.5 7.8 1.9 8.7 7.8 1.8 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF4199 PF13858.6 ORF57651 - 9.6 6.6 6.7 18 5.7 6.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Cytochrom_C PF00034.21 ORF57305 - 8.9e-15 55.6 0.1 1.2e-14 55.1 0.1 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF57305 - 3.8e-07 30.3 1.7 9.5e-07 29.1 1.7 1.6 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF57305 - 0.00068 19.4 0.1 0.0024 17.6 0.0 1.8 2 0 0 2 2 2 1 Cytochrome c-550 domain Cytochrome_P460 PF16694.5 ORF57305 - 0.074 13.4 0.4 1.9 8.8 0.1 2.0 2 0 0 2 2 2 0 Cytochrome P460 DUF1509 PF07420.11 ORF5719 - 0.11 11.4 4.0 0.13 11.2 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Ribosomal_L27A PF00828.19 ORF55657 - 9.3e-17 61.9 0.0 1e-16 61.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Cytochrom_C PF00034.21 ORF55646 - 8.9e-15 55.6 0.1 1.2e-14 55.1 0.1 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF55646 - 3.8e-07 30.3 1.7 9.5e-07 29.1 1.7 1.6 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF55646 - 0.00068 19.4 0.1 0.0024 17.6 0.0 1.8 2 0 0 2 2 2 1 Cytochrome c-550 domain Cytochrome_P460 PF16694.5 ORF55646 - 0.074 13.4 0.4 1.9 8.8 0.1 2.0 2 0 0 2 2 2 0 Cytochrome P460 DarA_C PF18789.1 ORF55398 - 0.016 15.5 0.1 0.028 14.7 0.1 1.4 1 0 0 1 1 1 0 Defence against restriction A C-terminal DNA_pol_alpha_N PF12254.8 ORF55398 - 0.25 11.5 2.4 0.44 10.7 2.4 1.7 1 1 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal Katanin_con80 PF13925.6 ORF5440 - 0.053 13.6 1.6 0.075 13.1 1.6 1.2 1 0 0 1 1 1 0 con80 domain of Katanin Atg14 PF10186.9 ORF5440 - 0.15 11.1 7.7 0.2 10.7 7.7 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CCDC-167 PF15188.6 ORF5440 - 0.99 9.8 7.1 1.2 9.5 0.0 2.4 1 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 PRKCSH_1 PF13015.6 ORF53899 - 7.3e-19 68.0 0.0 8.7e-19 67.7 0.0 1.0 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein PRKCSH PF07915.13 ORF53899 - 0.00015 22.7 2.2 0.00057 20.8 2.2 1.9 1 1 0 1 1 1 1 Glucosidase II beta subunit-like protein tRNA-synt_2 PF00152.20 ORF538 - 1.8e-18 66.7 0.0 2.3e-18 66.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) MAGI_u1 PF16663.5 ORF53262 - 0.035 14.2 0.2 0.12 12.5 0.2 1.9 1 1 0 1 1 1 0 Unstructured region on MAGI PhageP22-tail PF09251.10 ORF52745 - 0.033 12.5 2.6 0.04 12.3 2.6 1.0 1 0 0 1 1 1 0 Salmonella phage P22 tail-spike GlutR_dimer PF00745.20 ORF52551 - 0.037 14.5 0.8 0.059 13.8 0.6 1.5 1 1 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain IZUMO PF15005.6 ORF52551 - 0.23 12.0 2.7 0.28 11.7 2.7 1.2 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DUF4199 PF13858.6 ORF52551 - 1.3 9.4 2.7 1.2 9.5 1.4 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) HWE_HK PF07536.14 ORF52502 - 0.018 15.7 0.0 0.024 15.4 0.0 1.2 1 0 0 1 1 1 0 HWE histidine kinase ATP-synt_J PF04911.12 ORF52028 - 0.0042 16.6 0.0 0.19 11.3 0.0 2.4 1 1 0 1 1 1 1 ATP synthase j chain IRK PF01007.20 ORF51248 - 0.0073 16.1 4.5 0.0078 16.0 4.5 1.0 1 0 0 1 1 1 1 Inward rectifier potassium channel transmembrane domain Fer4 PF00037.27 ORF51142 - 8.4e-14 50.7 12.4 4.8e-07 29.3 3.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 ORF51142 - 3.2e-12 46.4 23.9 3.6e-08 33.4 13.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF51142 - 2.3e-11 44.1 11.9 4.1e-11 43.3 11.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF51142 - 1.2e-10 41.3 22.7 7.1e-08 32.4 13.6 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF51142 - 1.5e-10 40.7 12.5 5.6e-06 26.2 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 ORF51142 - 9e-10 39.0 6.3 0.0001 22.8 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF51142 - 3.4e-09 37.5 6.9 0.00029 21.7 1.3 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 ORF51142 - 4.2e-09 36.4 10.1 4.2e-09 36.4 10.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF51142 - 1.1e-08 34.9 11.8 0.00055 20.2 2.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 ORF51142 - 1.1e-06 28.4 19.9 0.00025 20.9 3.1 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 ORF51142 - 5.4e-06 26.8 6.3 0.00096 19.7 0.6 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 ORF51142 - 1.8e-05 25.1 13.9 3.7e-05 24.1 12.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 ORF51142 - 2.9e-05 24.2 9.1 0.02 15.1 1.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF51142 - 0.00015 22.6 11.1 0.0028 18.5 0.4 2.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF51142 - 0.00016 22.4 19.7 0.0038 18.1 4.4 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 ORF51142 - 0.0024 18.6 6.9 0.031 15.0 0.7 2.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain ETF_QO PF05187.13 ORF51142 - 0.0077 16.4 1.4 0.011 15.9 1.4 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Borrelia_REV PF03978.13 ORF49149 - 0.055 13.4 4.0 0.064 13.2 4.0 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi REV protein SIS_2 PF13580.6 ORF46387 - 0.091 12.8 0.3 0.14 12.1 0.1 1.5 2 0 0 2 2 2 0 SIS domain HWE_HK PF07536.14 ORF4474 - 0.018 15.7 0.0 0.024 15.4 0.0 1.2 1 0 0 1 1 1 0 HWE histidine kinase Mycobact_memb PF05423.13 ORF44153 - 0.16 11.9 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Mycobacterium membrane protein BT1 PF03092.16 ORF44069 - 4.2e-19 68.2 0.2 4.7e-19 68.0 0.2 1.0 1 0 0 1 1 1 1 BT1 family MFS_1 PF07690.16 ORF44069 - 0.0034 16.3 0.0 0.0037 16.2 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TP_methylase PF00590.20 ORF43990 - 0.049 13.6 0.3 0.11 12.4 0.1 1.6 2 0 0 2 2 2 0 Tetrapyrrole (Corrin/Porphyrin) Methylases MSV199 PF10553.9 ORF43475 - 0.045 14.0 1.2 0.058 13.6 0.5 1.5 1 1 0 1 1 1 0 MSV199 domain Ferritin-like PF12902.7 ORF43193 - 0.22 11.4 6.6 0.26 11.1 6.6 1.1 1 0 0 1 1 1 0 Ferritin-like Prothymosin PF03247.14 ORF43193 - 6 7.4 27.1 23 5.5 27.1 1.7 1 1 0 1 1 1 0 Prothymosin/parathymosin family Toxin_6 PF05453.12 ORF42990 - 0.11 12.9 0.1 0.24 11.9 0.1 1.5 1 0 0 1 1 1 0 BmTXKS1/BmP02 toxin family ERGIC_N PF13850.6 ORF42978 - 0.023 15.0 0.1 0.028 14.7 0.1 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF2062 PF09835.9 ORF42978 - 0.051 13.4 0.0 0.066 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) tRNA-synt_1_2 PF13603.6 ORF42632 - 0.011 15.3 0.7 0.016 14.8 0.7 1.2 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 Glycos_transf_1 PF00534.20 ORF4113 - 0.086 12.4 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF3113 PF11310.8 ORF40575 - 0.16 11.9 0.8 0.22 11.5 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3113) DUF4215 PF13948.6 ORF40374 - 0.14 12.7 22.3 0.77 10.2 4.6 3.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4215) Opy2 PF09463.10 ORF40374 - 0.76 10.2 25.7 0.85 10.0 0.7 4.4 2 1 2 4 4 4 0 Opy2 protein Ephrin_rec_like PF07699.13 ORF40374 - 7 6.5 24.9 7 6.5 10.3 3.4 1 1 2 3 3 3 0 Putative ephrin-receptor like Dickkopf_N PF04706.12 ORF40374 - 7.3 7.2 21.3 8.8 6.9 1.7 4.0 2 2 1 3 3 3 0 Dickkopf N-terminal cysteine-rich region MORN PF02493.20 ORF40351 - 2.2e-17 61.8 10.0 2.6e-07 30.1 0.6 4.2 3 1 0 3 3 3 3 MORN repeat DUF3048_C PF17479.2 ORF40351 - 0.072 13.5 4.6 6.5 7.2 0.3 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain F_actin_cap_B PF01115.17 ORF39243 - 0.002 17.8 0.2 0.0024 17.6 0.2 1.1 1 0 0 1 1 1 1 F-actin capping protein, beta subunit Pkinase PF00069.25 ORF39046 - 0.0016 17.9 0.0 0.0043 16.5 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain ATP-synt_S1 PF05827.12 ORF39046 - 0.073 12.9 2.3 0.48 10.3 1.3 2.0 1 1 1 2 2 2 0 Vacuolar ATP synthase subunit S1 (ATP6S1) UPF0240 PF06784.11 ORF38607 - 0.015 15.3 0.5 0.019 15.1 0.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0240) DUF4665 PF15679.5 ORF38607 - 0.023 15.3 2.2 0.029 15.0 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4665) Peptidase_S46 PF10459.9 ORF38607 - 0.071 11.8 0.3 0.079 11.6 0.3 1.0 1 0 0 1 1 1 0 Peptidase S46 DUF1320 PF07030.12 ORF38607 - 0.084 13.0 0.1 0.2 11.8 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1320) ANAPC1 PF12859.7 ORF38547 - 0.43 11.1 3.4 0.52 10.9 3.4 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 zf-RING_UBOX PF13445.6 ORF38444 - 4e-07 30.0 0.6 6e-07 29.4 0.2 1.5 1 1 0 1 1 1 1 RING-type zinc-finger Rtf2 PF04641.12 ORF38444 - 7.4e-05 22.2 0.1 7.8e-05 22.2 0.1 1.1 1 0 0 1 1 1 1 Rtf2 RING-finger zf-RING_5 PF14634.6 ORF38444 - 0.00085 19.2 1.0 0.0014 18.6 1.0 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF38444 - 0.0018 18.5 1.6 0.0047 17.2 1.6 1.7 1 1 1 2 2 2 2 Ring finger domain zf-C3HC4 PF00097.25 ORF38444 - 0.067 13.1 2.3 0.11 12.3 2.3 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF38444 - 0.56 10.1 4.8 1.7 8.5 4.9 1.8 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF38444 - 2.2 8.2 6.7 13 5.8 6.7 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) YdjO PF14169.6 ORF38141 - 0.013 15.2 0.1 0.021 14.5 0.1 1.3 1 0 0 1 1 1 0 Cold-inducible protein YdjO F_actin_cap_B PF01115.17 ORF37481 - 0.002 17.8 0.2 0.0024 17.6 0.2 1.1 1 0 0 1 1 1 1 F-actin capping protein, beta subunit DUF4215 PF13948.6 ORF36941 - 0.14 12.7 22.3 0.77 10.2 4.6 3.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4215) Opy2 PF09463.10 ORF36941 - 0.76 10.2 25.7 0.85 10.0 0.7 4.4 2 1 2 4 4 4 0 Opy2 protein Ephrin_rec_like PF07699.13 ORF36941 - 7 6.5 24.9 7 6.5 10.3 3.4 1 1 2 3 3 3 0 Putative ephrin-receptor like Dickkopf_N PF04706.12 ORF36941 - 7.3 7.2 21.3 8.8 6.9 1.7 4.0 2 2 1 3 3 3 0 Dickkopf N-terminal cysteine-rich region DUF1298 PF06974.13 ORF36332 - 0.00013 22.0 0.0 0.00013 21.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Phage_T4_Ndd PF06591.11 ORF36051 - 0.0063 16.3 0.0 0.0078 16.0 0.0 1.1 1 0 0 1 1 1 1 T4-like phage nuclear disruption protein (Ndd) HDC PF02329.16 ORF36051 - 0.17 10.9 0.0 0.18 10.8 0.0 1.1 1 0 0 1 1 1 0 Histidine carboxylase PI chain TBCA PF02970.16 ORF35592 - 6.9e-23 80.8 10.4 8.8e-23 80.5 10.4 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A DUF4298 PF14131.6 ORF35592 - 0.0022 17.9 3.3 0.058 13.4 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4298) Coagulase PF08764.10 ORF35592 - 0.0029 17.9 6.8 0.0029 17.9 6.8 1.0 1 0 0 1 1 1 1 Staphylococcus aureus coagulase DHR10 PF18595.1 ORF35592 - 0.0088 16.1 8.7 0.03 14.4 8.7 1.7 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain COG7 PF10191.9 ORF35592 - 0.011 14.0 0.7 0.012 13.9 0.7 1.0 1 0 0 1 1 1 0 Golgi complex component 7 (COG7) Sec34 PF04136.15 ORF35592 - 0.015 15.2 2.1 0.019 14.9 2.1 1.2 1 0 0 1 1 1 0 Sec34-like family NPV_P10 PF05531.12 ORF35592 - 0.02 15.3 2.0 0.036 14.5 1.9 1.6 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein HMA PF00403.26 ORF35592 - 0.026 15.0 2.7 0.47 10.9 0.0 2.5 2 1 0 2 2 2 0 Heavy-metal-associated domain Carboxyl_trans PF01039.22 ORF35592 - 0.038 12.6 0.2 0.042 12.5 0.2 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain eIF-4B PF06273.11 ORF35592 - 0.041 12.9 5.3 0.045 12.8 5.3 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B BLOC1_2 PF10046.9 ORF35592 - 0.062 13.6 6.6 0.073 13.4 5.8 1.6 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FapA PF03961.13 ORF35592 - 0.064 11.9 7.4 0.073 11.7 7.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Peptidase_C34 PF05413.11 ORF35592 - 0.07 13.4 0.2 0.13 12.6 0.1 1.5 1 1 1 2 2 2 0 Putative closterovirus papain-like endopeptidase DivIC PF04977.15 ORF35592 - 0.1 12.4 3.7 0.8 9.5 0.8 2.2 1 1 1 2 2 2 0 Septum formation initiator MapZ_EC1 PF18041.1 ORF35592 - 0.19 12.0 6.0 0.83 9.9 3.6 2.1 2 0 0 2 2 2 0 MapZ extracellular domain 1 APG6_N PF17675.1 ORF35592 - 0.19 12.2 10.8 0.26 11.8 10.8 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF35592 - 0.27 11.7 9.7 3.1 8.3 4.1 2.2 1 1 1 2 2 2 0 Cell division protein ZapB TMPIT PF07851.13 ORF35592 - 0.28 10.4 2.7 0.31 10.2 2.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Nup88 PF10168.9 ORF35592 - 0.79 7.5 7.1 0.83 7.4 7.1 1.0 1 0 0 1 1 1 0 Nuclear pore component PCRF PF03462.18 ORF35592 - 1.6 8.6 7.4 2.1 8.2 7.4 1.4 1 1 0 1 1 1 0 PCRF domain bZIP_1 PF00170.21 ORF35592 - 2.1 8.5 7.8 1.2 9.3 5.0 1.9 1 1 1 2 2 2 0 bZIP transcription factor DUF1298 PF06974.13 ORF35193 - 0.00013 22.0 0.0 0.00013 21.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) ABC_membrane PF00664.23 ORF34722 - 3.1e-15 56.6 0.2 3.3e-15 56.5 0.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Toxin_trans PF07952.12 ORF34722 - 0.0021 17.2 0.2 0.0026 16.9 0.1 1.3 1 1 0 1 1 1 1 Clostridium neurotoxin, Translocation domain Sugar_tr PF00083.24 ORF33505 - 1e-06 27.9 1.8 1.1e-06 27.8 1.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF33505 - 7.9e-05 21.7 2.3 8.2e-05 21.7 2.3 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF33505 - 0.053 11.8 1.2 0.066 11.5 0.8 1.2 1 1 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family V-SNARE_C PF12352.8 ORF31765 - 7.7e-14 51.7 0.3 9.7e-14 51.4 0.3 1.1 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus SPC12 PF06645.13 ORF31703 - 2.4e-22 78.8 4.1 3e-22 78.5 4.1 1.1 1 0 0 1 1 1 1 Microsomal signal peptidase 12 kDa subunit (SPC12) Cytochrom_C PF00034.21 ORF31497 - 8.9e-15 55.6 0.1 1.2e-14 55.1 0.1 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF31497 - 3.8e-07 30.3 1.7 9.5e-07 29.1 1.7 1.6 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF31497 - 0.00068 19.4 0.1 0.0024 17.6 0.0 1.8 2 0 0 2 2 2 1 Cytochrome c-550 domain Cytochrome_P460 PF16694.5 ORF31497 - 0.074 13.4 0.4 1.9 8.8 0.1 2.0 2 0 0 2 2 2 0 Cytochrome P460 Pkinase PF00069.25 ORF30458 - 1.4e-13 50.9 0.0 1.4e-13 50.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF30458 - 6.9e-07 28.4 0.0 7.7e-07 28.2 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF30458 - 5.1e-05 22.7 0.0 5.1e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF30458 - 0.00022 21.2 0.0 0.00081 19.4 0.0 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF30458 - 0.019 14.0 0.1 0.021 13.8 0.1 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase DUF1315 PF07023.12 ORF30458 - 0.16 12.1 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1315) HWE_HK PF07536.14 ORF29849 - 0.018 15.7 0.0 0.024 15.4 0.0 1.2 1 0 0 1 1 1 0 HWE histidine kinase MORN PF02493.20 ORF29833 - 2.2e-17 61.8 10.0 2.6e-07 30.1 0.6 4.2 3 1 0 3 3 3 3 MORN repeat DUF3048_C PF17479.2 ORF29833 - 0.072 13.5 4.6 6.5 7.2 0.3 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain Mito_carr PF00153.27 ORF28966 - 1.3e-10 41.1 0.3 1.6e-10 40.7 0.3 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein FlhD PF05247.13 ORF28966 - 0.082 13.2 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) FtsH_ext PF06480.15 ORF28772 - 7.5 7.0 6.4 1.1 9.6 2.4 1.7 2 0 0 2 2 2 0 FtsH Extracellular TBCA PF02970.16 ORF28557 - 6.9e-23 80.8 10.4 8.8e-23 80.5 10.4 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A DUF4298 PF14131.6 ORF28557 - 0.0022 17.9 3.3 0.058 13.4 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4298) Coagulase PF08764.10 ORF28557 - 0.0029 17.9 6.8 0.0029 17.9 6.8 1.0 1 0 0 1 1 1 1 Staphylococcus aureus coagulase DHR10 PF18595.1 ORF28557 - 0.0088 16.1 8.7 0.03 14.4 8.7 1.7 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain COG7 PF10191.9 ORF28557 - 0.011 14.0 0.7 0.012 13.9 0.7 1.0 1 0 0 1 1 1 0 Golgi complex component 7 (COG7) Sec34 PF04136.15 ORF28557 - 0.015 15.2 2.1 0.019 14.9 2.1 1.2 1 0 0 1 1 1 0 Sec34-like family NPV_P10 PF05531.12 ORF28557 - 0.02 15.3 2.0 0.036 14.5 1.9 1.6 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein HMA PF00403.26 ORF28557 - 0.026 15.0 2.7 0.47 10.9 0.0 2.5 2 1 0 2 2 2 0 Heavy-metal-associated domain Carboxyl_trans PF01039.22 ORF28557 - 0.038 12.6 0.2 0.042 12.5 0.2 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain eIF-4B PF06273.11 ORF28557 - 0.041 12.9 5.3 0.045 12.8 5.3 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B BLOC1_2 PF10046.9 ORF28557 - 0.062 13.6 6.6 0.073 13.4 5.8 1.6 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FapA PF03961.13 ORF28557 - 0.064 11.9 7.4 0.073 11.7 7.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Peptidase_C34 PF05413.11 ORF28557 - 0.07 13.4 0.2 0.13 12.6 0.1 1.5 1 1 1 2 2 2 0 Putative closterovirus papain-like endopeptidase DivIC PF04977.15 ORF28557 - 0.1 12.4 3.7 0.8 9.5 0.8 2.2 1 1 1 2 2 2 0 Septum formation initiator MapZ_EC1 PF18041.1 ORF28557 - 0.19 12.0 6.0 0.83 9.9 3.6 2.1 2 0 0 2 2 2 0 MapZ extracellular domain 1 APG6_N PF17675.1 ORF28557 - 0.19 12.2 10.8 0.26 11.8 10.8 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF28557 - 0.27 11.7 9.7 3.1 8.3 4.1 2.2 1 1 1 2 2 2 0 Cell division protein ZapB TMPIT PF07851.13 ORF28557 - 0.28 10.4 2.7 0.31 10.2 2.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Nup88 PF10168.9 ORF28557 - 0.79 7.5 7.1 0.83 7.4 7.1 1.0 1 0 0 1 1 1 0 Nuclear pore component PCRF PF03462.18 ORF28557 - 1.6 8.6 7.4 2.1 8.2 7.4 1.4 1 1 0 1 1 1 0 PCRF domain bZIP_1 PF00170.21 ORF28557 - 2.1 8.5 7.8 1.2 9.3 5.0 1.9 1 1 1 2 2 2 0 bZIP transcription factor MORN PF02493.20 ORF28505 - 7.8e-10 38.1 14.9 0.0027 17.5 0.1 4.1 4 0 0 4 4 4 4 MORN repeat Tam41_Mmp37 PF09139.11 ORF25626 - 1.4e-17 64.2 1.7 2.1e-17 63.5 1.6 1.2 1 1 0 1 1 1 1 Phosphatidate cytidylyltransferase, mitochondrial SpoIISB_antitox PF14185.6 ORF25626 - 0.15 12.0 0.3 0.15 12.0 0.3 2.3 3 0 0 3 3 3 0 Antitoxin SpoIISB, type II toxin-antitoxin system Acetyltransf_18 PF18014.1 ORF25193 - 0.17 11.7 0.4 20 5.1 0.1 2.2 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Biopterin_H PF00351.21 ORF25155 - 2.2e-48 165.0 0.0 2.4e-48 164.9 0.0 1.0 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase MORN PF02493.20 ORF24916 - 2.2e-17 61.8 10.0 2.6e-07 30.1 0.6 4.2 3 1 0 3 3 3 3 MORN repeat DUF3048_C PF17479.2 ORF24916 - 0.072 13.5 4.6 6.5 7.2 0.3 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain FSA_C PF10479.9 ORF24145 - 4.9 5.2 6.4 4.9 5.2 6.4 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Copine PF07002.16 ORF23648 - 3.7e-24 85.4 0.0 4e-24 85.3 0.0 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF23648 - 0.0001 22.5 0.0 0.0001 22.5 0.0 1.1 1 0 0 1 1 1 1 vWA found in TerF C terminus MORN PF02493.20 ORF23 - 2.2e-17 61.8 10.0 2.6e-07 30.1 0.6 4.2 3 1 0 3 3 3 3 MORN repeat DUF3048_C PF17479.2 ORF23 - 0.072 13.5 4.6 6.5 7.2 0.3 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain DUF2884 PF11101.8 ORF22865 - 0.015 14.9 0.3 0.016 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) ChapFlgA_N PF17656.1 ORF20951 - 0.0072 16.5 0.1 0.011 15.8 0.1 1.3 1 0 0 1 1 1 1 FlgA N-terminal domain DUF148 PF02520.17 ORF20121 - 0.0021 18.1 15.3 0.0021 18.1 15.3 1.4 1 1 0 1 1 1 1 Domain of unknown function DUF148 Rotamase_2 PF13145.6 ORF20121 - 0.011 16.5 5.3 0.013 16.3 5.3 1.1 1 0 0 1 1 1 0 PPIC-type PPIASE domain Lipase_chap PF03280.14 ORF20121 - 0.17 11.8 0.4 0.17 11.8 0.4 2.1 1 1 1 2 2 2 0 Proteobacterial lipase chaperone protein Rootletin PF15035.6 ORF20121 - 0.59 10.1 17.2 0.29 11.1 15.0 1.5 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion PDDEXK_6 PF04720.12 ORF20121 - 3.6 7.5 12.3 4.1 7.3 12.3 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function TMPIT PF07851.13 ORF20121 - 6.9 5.8 15.6 8.2 5.6 15.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein POTRA PF07244.15 ORF20069 - 0.0071 16.9 0.7 0.016 15.8 0.3 1.9 1 1 1 2 2 2 1 Surface antigen variable number repeat Fer4 PF00037.27 ORF19861 - 8.4e-14 50.7 12.4 4.8e-07 29.3 3.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 ORF19861 - 3.2e-12 46.4 23.9 3.6e-08 33.4 13.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF19861 - 2.3e-11 44.1 11.9 4.1e-11 43.3 11.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF19861 - 1.2e-10 41.3 22.7 7.1e-08 32.4 13.6 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF19861 - 1.5e-10 40.7 12.5 5.6e-06 26.2 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 ORF19861 - 9e-10 39.0 6.3 0.0001 22.8 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF19861 - 3.4e-09 37.5 6.9 0.00029 21.7 1.3 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 ORF19861 - 4.2e-09 36.4 10.1 4.2e-09 36.4 10.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF19861 - 1.1e-08 34.9 11.8 0.00055 20.2 2.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 ORF19861 - 1.1e-06 28.4 19.9 0.00025 20.9 3.1 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 ORF19861 - 5.4e-06 26.8 6.3 0.00096 19.7 0.6 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 ORF19861 - 1.8e-05 25.1 13.9 3.7e-05 24.1 12.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 ORF19861 - 2.9e-05 24.2 9.1 0.02 15.1 1.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF19861 - 0.00015 22.6 11.1 0.0028 18.5 0.4 2.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF19861 - 0.00016 22.4 19.7 0.0038 18.1 4.4 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 ORF19861 - 0.0024 18.6 6.9 0.031 15.0 0.7 2.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain ETF_QO PF05187.13 ORF19861 - 0.0077 16.4 1.4 0.011 15.9 1.4 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S ECH_1 PF00378.20 ORF18771 - 0.00019 20.9 0.0 0.0002 20.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase MSV199 PF10553.9 ORF18555 - 0.045 14.0 1.2 0.058 13.6 0.5 1.5 1 1 0 1 1 1 0 MSV199 domain DUF515 PF04415.12 ORF17891 - 5.1 5.4 6.7 5.8 5.2 6.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) PfkB PF00294.24 ORF17655 - 9.6e-29 100.6 2.1 1e-28 100.5 2.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF17655 - 0.00033 20.1 0.1 0.00039 19.9 0.1 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Hap4_Hap_bind PF10297.9 ORF14037 - 0.041 14.0 1.7 0.084 13.0 1.7 1.5 1 0 0 1 1 1 0 Minimal binding motif of Hap4 for binding to Hap2/3/5 V_ATPase_prox PF18274.1 ORF14037 - 0.21 11.6 2.3 0.37 10.8 1.8 1.8 1 1 0 1 1 1 0 Vacuolar ATPase Subunit I N-terminal proximal lobe Zn_peptidase_2 PF04298.12 ORF14014 - 0.59 9.5 5.9 0.48 9.8 5.2 1.3 1 1 0 1 1 1 0 Putative neutral zinc metallopeptidase DUF818 PF05677.12 ORF14014 - 2.4 7.0 8.8 2.8 6.8 8.8 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) T3SchapCesA PF11439.8 ORF13561 - 0.049 13.8 1.3 0.46 10.7 0.1 2.2 2 0 0 2 2 2 0 Type III secretion system filament chaperone CesA Patatin PF01734.22 ORF12382 - 7.4e-11 42.6 0.0 8.6e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 Patatin-like phospholipase LETM1 PF07766.13 ORF11892 - 0.076 12.4 5.6 0.085 12.2 5.6 1.1 1 0 0 1 1 1 0 LETM1-like protein Aldo_ket_red PF00248.21 ORF112048 - 2.2e-08 33.7 0.0 3.2e-08 33.1 0.0 1.3 1 1 0 1 1 1 1 Aldo/keto reductase family Cys_Knot_tox PF17486.2 ORF111528 - 0.093 13.0 1.7 0.18 12.1 1.7 1.4 1 0 0 1 1 1 0 Cystine knot toxins PAP_assoc PF03828.19 ORF111245 - 1.1e-05 25.6 0.1 3.4e-05 24.0 0.1 1.8 1 1 0 1 1 1 1 Cid1 family poly A polymerase Nrap_D2 PF17403.2 ORF111245 - 0.011 15.5 0.0 0.011 15.4 0.0 1.2 1 1 0 1 1 1 0 Nrap protein PAP/OAS-like domain Extensin_2 PF04554.13 ORF111218 - 0.95 9.6 13.9 2.3 8.4 13.9 1.7 1 1 0 1 1 1 0 Extensin-like region Imm5 PF14423.6 ORF109822 - 0.28 11.4 2.8 0.52 10.5 2.8 1.4 1 1 0 1 1 1 0 Immunity protein Imm5 Ion_trans PF00520.31 ORF109805 - 1.9e-09 37.1 5.7 2.2e-09 36.9 5.7 1.0 1 0 0 1 1 1 1 Ion transport protein YhhN PF07947.14 ORF108736 - 0.038 13.6 2.1 0.11 12.1 2.2 1.7 1 1 0 1 1 1 0 YhhN family Peptidase_M1 PF01433.20 ORF108289 - 9.1e-29 100.6 0.3 1.1e-28 100.4 0.3 1.1 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M61 PF05299.12 ORF108289 - 0.0007 20.0 1.1 0.027 14.9 1.1 2.1 1 1 0 1 1 1 1 M61 glycyl aminopeptidase Peptidase_MA_2 PF13485.6 ORF108289 - 0.048 13.3 0.1 0.059 13.0 0.1 1.1 1 0 0 1 1 1 0 Peptidase MA superfamily DUF4932 PF16286.5 ORF108289 - 0.097 11.9 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4932) DUF5565 PF17720.1 ORF107511 - 0.013 14.4 0.0 0.015 14.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5565) SHE3 PF17078.5 ORF106498 - 0.0083 15.9 6.5 0.011 15.5 6.5 1.2 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Imm40 PF15569.6 ORF106498 - 0.017 15.2 1.5 0.39 10.8 0.1 2.3 1 1 1 2 2 2 0 Immunity protein 40 KH_5 PF13184.6 ORF106498 - 0.028 14.5 0.8 1.4 9.1 0.1 2.2 2 0 0 2 2 2 0 NusA-like KH domain DUF5470 PF17564.2 ORF106498 - 0.041 14.1 1.1 0.15 12.3 0.1 2.2 1 1 0 2 2 2 0 Family of unknown function (DUF5470) QueF PF14489.6 ORF106498 - 0.053 13.7 0.1 0.084 13.0 0.1 1.4 1 0 0 1 1 1 0 QueF-like protein Prominin PF05478.11 ORF106498 - 0.054 11.4 2.0 0.063 11.2 2.0 1.1 1 0 0 1 1 1 0 Prominin DUF4618 PF15397.6 ORF106498 - 0.069 12.6 4.3 0.086 12.3 4.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Spore_GerAC PF05504.11 ORF106498 - 0.081 13.1 6.2 0.11 12.7 6.2 1.3 1 1 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal DUF1815 PF08844.10 ORF106498 - 0.12 12.4 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) LMP PF04778.12 ORF106498 - 0.76 9.7 8.3 0.71 9.8 6.8 1.6 1 1 0 1 1 1 0 LMP repeated region DUF1295 PF06966.12 ORF106317 - 3.5e-05 23.4 0.1 4.5e-05 23.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) HobA PF12163.8 ORF106317 - 0.046 13.3 0.2 0.056 13.0 0.2 1.2 1 0 0 1 1 1 0 DNA replication regulator DUF5345 PF17280.2 ORF104779 - 0.028 14.4 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5345) DUF1295 PF06966.12 ORF104508 - 1.7e-07 31.0 0.3 2.2e-07 30.6 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) MORN PF02493.20 ORF102682 - 2.2e-17 61.8 10.0 2.6e-07 30.1 0.6 4.2 3 1 0 3 3 3 3 MORN repeat DUF3048_C PF17479.2 ORF102682 - 0.072 13.5 4.6 6.5 7.2 0.3 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain Clusterin PF01093.17 ORF101917 - 0.064 12.3 0.0 0.068 12.2 0.0 1.1 1 0 0 1 1 1 0 Clusterin ABC2_membrane_3 PF12698.7 ORF101917 - 0.22 10.6 0.5 0.25 10.4 0.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein EF-hand_7 PF13499.6 ORF10174 - 2.1e-06 28.1 2.1 0.004 17.6 0.2 2.2 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF10174 - 3.8e-05 22.9 0.5 0.0037 16.7 0.0 2.9 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF10174 - 0.00025 20.7 0.2 0.034 14.1 0.0 2.6 2 1 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF10174 - 0.014 14.9 0.3 0.1 12.2 0.0 2.2 2 0 0 2 2 2 0 EF hand Nuc_rec_co-act PF08815.10 ORF10174 - 0.026 14.4 1.5 2.1 8.2 0.5 2.5 2 1 0 2 2 2 0 Nuclear receptor coactivator EF-hand_9 PF14658.6 ORF10174 - 0.035 14.4 0.1 6.6 7.1 0.1 2.4 1 1 2 3 3 3 0 EF-hand domain Flg_hook PF02120.16 ORF10174 - 0.086 12.7 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK PhageP22-tail PF09251.10 ORF100624 - 0.033 12.5 2.6 0.04 12.3 2.6 1.0 1 0 0 1 1 1 0 Salmonella phage P22 tail-spike ECSCR PF15820.5 NODE_52830_length_337_cov_1.546358_g44906_i0reverse_frame_1 - 0.095 12.5 2.3 0.25 11.2 1.8 1.7 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator TraV PF09676.10 NODE_52830_length_337_cov_1.546358_g44906_i0reverse_frame_1 - 1.2 10.2 8.1 1.4 9.9 8.1 1.1 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) PP1_bind PF15276.6 NODE_52825_length_337_cov_1.850993_g44901_i0reverse_frame_1 - 0.1 12.9 0.0 0.16 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein phosphatase 1 binding LapA_dom PF06305.11 NODE_52822_length_337_cov_1.937086_g44898_i0reverse_frame_1 - 0.016 15.0 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain HemY_N PF07219.13 NODE_52822_length_337_cov_1.937086_g44898_i0reverse_frame_1 - 0.17 12.1 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus NPBW PF15180.6 NODE_52813_length_337_cov_2.245033_g44889_i0reverse_frame_1 - 0.095 12.6 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Neuropeptides B and W STAS PF01740.21 NODE_52813_length_337_cov_2.245033_g44889_i0forward_frame_1 - 1.4e-13 50.5 0.0 1.5e-13 50.4 0.0 1.0 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 NODE_52813_length_337_cov_2.245033_g44889_i0forward_frame_1 - 0.068 13.5 0.0 0.09 13.1 0.0 1.2 1 0 0 1 1 1 0 STAS domain DUF3648 PF12364.8 NODE_52800_length_337_cov_3.347682_g44876_i0forward_frame_1 - 0.026 14.8 3.1 0.033 14.4 3.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3648) Lamprin PF06403.11 NODE_52797_length_337_cov_4.506623_g44873_i0forward_frame_1 - 1.2 9.1 17.8 1.5 8.7 5.0 2.1 1 1 1 2 2 2 0 Lamprin ANAPC3 PF12895.7 NODE_52794_length_337_cov_5.701987_g44870_i0reverse_frame_1 - 0.014 15.6 0.0 0.023 14.9 0.0 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 NODE_52794_length_337_cov_5.701987_g44870_i0reverse_frame_1 - 0.019 15.0 0.1 0.033 14.3 0.1 1.4 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat Snapin_Pallidin PF14712.6 NODE_52789_length_337_cov_50.784768_g44865_i0forward_frame_1 - 0.016 15.6 0.1 0.021 15.2 0.1 1.2 1 0 0 1 1 1 0 Snapin/Pallidin FAM199X PF15814.5 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_1 - 2.7 7.0 10.5 3.1 6.8 10.5 1.0 1 0 0 1 1 1 0 Protein family FAM199X Pex14_N PF04695.13 NODE_52786_length_337_cov_59.394040_g44862_i0forward_frame_1 - 0.051 14.2 3.2 0.057 14.1 3.2 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF1631 PF07793.11 NODE_52786_length_337_cov_59.394040_g44862_i0forward_frame_1 - 0.61 8.4 1.1 0.62 8.4 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) DUF4614 PF15391.6 NODE_52786_length_337_cov_59.394040_g44862_i0forward_frame_1 - 4.1 7.4 13.5 5 7.1 13.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) DUF2661 PF10860.8 NODE_52785_length_337_cov_60.705298_g44861_i0reverse_frame_1 - 0.063 13.4 0.4 0.063 13.4 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2661) DUF4834 PF16118.5 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.0096 16.9 0.0 0.013 16.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) OAD_gamma PF04277.13 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.02 15.5 2.1 0.02 15.5 2.1 2.3 1 1 1 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Tetraspanin PF00335.20 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.02 14.6 0.7 0.029 14.1 0.7 1.2 1 0 0 1 1 1 0 Tetraspanin family Connexin PF00029.19 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.057 13.2 0.3 0.063 13.0 0.3 1.2 1 0 0 1 1 1 0 Connexin MRI PF15325.6 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.22 12.6 4.7 0.31 12.2 4.7 1.1 1 0 0 1 1 1 0 Modulator of retrovirus infection Presenilin PF01080.17 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.46 9.2 1.0 0.49 9.1 1.0 1.1 1 0 0 1 1 1 0 Presenilin Arena_ncap_C PF17290.2 NODE_52778_length_337_cov_72.586093_g44854_i0forward_frame_1 - 0.0092 15.3 0.1 0.013 14.9 0.1 1.2 1 1 0 1 1 1 1 Arenavirus nucleocapsid C-terminal domain RRXRR PF14239.6 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_1 - 0.056 13.3 0.5 0.07 13.0 0.5 1.1 1 0 0 1 1 1 0 RRXRR protein RicinB_lectin_2 PF14200.6 NODE_52771_length_337_cov_81.735099_g44847_i0reverse_frame_1 - 0.016 15.9 0.5 0.021 15.5 0.5 1.2 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin domain-like DUF5346 PF17281.2 NODE_52769_length_337_cov_84.433775_g44845_i0reverse_frame_1 - 0.28 11.2 5.1 0.46 10.5 5.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5346) ToxS PF17323.2 NODE_52769_length_337_cov_84.433775_g44845_i0forward_frame_1 - 0.0056 16.4 0.5 0.0063 16.2 0.5 1.2 1 0 0 1 1 1 1 Trans-membrane regulatory protein ToxS Tup_N PF08581.10 NODE_52768_length_337_cov_86.016556_g44844_i0forward_frame_1 - 0.015 15.5 0.9 0.36 11.2 0.3 2.5 2 1 0 2 2 2 0 Tup N-terminal Utp13 PF08625.11 NODE_52768_length_337_cov_86.016556_g44844_i0forward_frame_1 - 0.045 13.6 0.7 0.056 13.4 0.7 1.2 1 0 0 1 1 1 0 Utp13 specific WD40 associated domain WD40_alt PF14077.6 NODE_52768_length_337_cov_86.016556_g44844_i0forward_frame_1 - 0.06 13.2 0.7 7 6.6 0.2 2.5 2 0 0 2 2 2 0 Alternative WD40 repeat motif SEC-C PF02810.15 NODE_52768_length_337_cov_86.016556_g44844_i0forward_frame_1 - 0.15 12.0 0.5 0.22 11.5 0.5 1.3 1 0 0 1 1 1 0 SEC-C motif TOH_N PF12549.8 NODE_52760_length_337_cov_125.370861_g44836_i0reverse_frame_1 - 0.047 13.6 0.3 0.047 13.6 0.3 3.0 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal Dymeclin PF09742.9 NODE_52752_length_337_cov_231.887417_g44828_i0forward_frame_1 - 0.084 11.3 2.2 0.088 11.2 2.2 1.0 1 0 0 1 1 1 0 Dyggve-Melchior-Clausen syndrome protein TAP35_44 PF07265.11 NODE_52752_length_337_cov_231.887417_g44828_i0forward_frame_1 - 7.5 6.6 6.6 0.72 9.9 1.0 2.0 2 0 0 2 2 2 0 Tapetum specific protein TAP35/TAP44 DUF364 PF04016.12 NODE_52748_length_337_cov_299.798013_g44824_i0forward_frame_1 - 0.23 11.1 0.2 0.61 9.7 0.1 1.7 1 1 1 2 2 2 0 Putative heavy-metal chelation TMEM187 PF15100.6 NODE_52742_length_338_cov_1.231023_g44818_i0reverse_frame_1 - 0.0026 17.4 0.0 0.0028 17.3 0.0 1.1 1 0 0 1 1 1 1 TMEM187 protein family DUF3927 PF13064.6 NODE_52741_length_338_cov_1.316832_g44817_i0reverse_frame_1 - 4.8 7.3 7.8 1.7e+02 2.3 6.3 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3927) Snapin_Pallidin PF14712.6 NODE_52741_length_338_cov_1.316832_g44817_i0forward_frame_1 - 0.064 13.7 3.1 0.097 13.1 3.1 1.4 1 1 0 1 1 1 0 Snapin/Pallidin DUF948 PF06103.11 NODE_52741_length_338_cov_1.316832_g44817_i0forward_frame_1 - 0.18 12.1 0.7 0.44 10.8 0.3 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) SseC PF04888.12 NODE_52741_length_338_cov_1.316832_g44817_i0forward_frame_1 - 0.3 10.6 2.7 0.14 11.7 0.8 1.4 2 0 0 2 2 2 0 Secretion system effector C (SseC) like family PdaC PF13739.6 NODE_52741_length_338_cov_1.316832_g44817_i0forward_frame_1 - 8.2 7.5 9.7 58 4.8 0.9 2.1 1 1 1 2 2 2 0 Deacetylase PdaC Cbl_N2 PF02761.14 NODE_52739_length_338_cov_1.442244_g44815_i0forward_frame_1 - 0.037 14.7 0.3 0.08 13.7 0.1 1.6 2 0 0 2 2 2 0 CBL proto-oncogene N-terminus, EF hand-like domain POX PF07526.11 NODE_52725_length_338_cov_2.095710_g44801_i0reverse_frame_1 - 0.094 13.3 0.1 0.1 13.2 0.1 1.1 1 0 0 1 1 1 0 Associated with HOX CYSTM PF12734.7 NODE_52723_length_338_cov_2.198020_g44799_i0reverse_frame_1 - 0.00026 21.3 4.0 0.00041 20.6 4.0 1.2 1 0 0 1 1 1 1 Cysteine-rich TM module stress tolerance Rtt102p PF09510.10 NODE_52723_length_338_cov_2.198020_g44799_i0reverse_frame_1 - 0.022 15.0 0.1 0.026 14.7 0.1 1.1 1 0 0 1 1 1 0 Rtt102p-like transcription regulator protein DSPc PF00782.20 NODE_52721_length_338_cov_2.224422_g44797_i0forward_frame_1 - 5.9e-05 22.9 0.0 7.1e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain ATP-synt_8 PF00895.20 NODE_52718_length_338_cov_2.425743_g44794_i0reverse_frame_1 - 3.2 8.3 6.2 2.6 8.6 0.6 2.5 2 1 1 3 3 3 0 ATP synthase protein 8 PP-binding PF00550.25 NODE_52714_length_338_cov_2.729373_g44790_i0forward_frame_1 - 2.1e-12 47.2 0.1 2.8e-12 46.8 0.1 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site Thioesterase PF00975.20 NODE_52714_length_338_cov_2.729373_g44790_i0forward_frame_1 - 0.066 13.3 0.1 0.074 13.1 0.1 1.1 1 0 0 1 1 1 0 Thioesterase domain RecO_N PF11967.8 NODE_52713_length_338_cov_2.755776_g44789_i0reverse_frame_1 - 0.11 12.4 0.2 0.24 11.4 0.1 1.5 2 0 0 2 2 2 0 Recombination protein O N terminal Cupin_2 PF07883.11 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 6.1e-09 35.5 0.1 7.9e-09 35.1 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 1.8e-05 24.7 0.3 2.2e-05 24.4 0.3 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_7 PF12973.7 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.0015 18.4 0.2 0.0019 18.0 0.2 1.2 1 0 0 1 1 1 1 ChrR Cupin-like domain EutQ PF06249.12 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.0036 17.1 0.0 0.0042 16.9 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ JmjC PF02373.22 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.02 15.3 0.0 0.028 14.8 0.0 1.4 1 1 0 1 1 1 0 JmjC domain, hydroxylase Cupin_6 PF12852.7 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.022 14.5 0.0 0.026 14.2 0.0 1.1 1 0 0 1 1 1 0 Cupin AraC_binding_2 PF14525.6 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.025 14.3 0.0 0.029 14.1 0.0 1.1 1 0 0 1 1 1 0 AraC-binding-like domain Cupin_3 PF05899.12 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.03 14.0 0.0 0.034 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Gifsy-2 PF13856.6 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.075 13.4 0.0 0.11 12.8 0.0 1.3 1 1 0 1 1 1 0 ATP-binding sugar transporter from pro-phage Abhydrolase_3 PF07859.13 NODE_52711_length_338_cov_2.891089_g44787_i0reverse_frame_1 - 1.4e-08 34.9 0.0 1.5e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Lyase_1 PF00206.20 NODE_52700_length_338_cov_3.547855_g44776_i0forward_frame_1 - 8.9e-24 84.4 0.0 9.8e-24 84.3 0.0 1.0 1 0 0 1 1 1 1 Lyase K-box PF01486.17 NODE_52700_length_338_cov_3.547855_g44776_i0forward_frame_1 - 0.056 13.6 0.6 0.1 12.7 0.4 1.5 1 1 1 2 2 2 0 K-box region Sigma_1s PF02454.16 NODE_52700_length_338_cov_3.547855_g44776_i0forward_frame_1 - 0.08 12.9 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Sigma 1s protein GARP PF16731.5 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.1 12.3 23.7 0.12 12.0 6.3 2.2 1 1 1 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma HD_assoc PF13286.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.13 12.8 4.6 0.19 12.3 4.1 1.5 1 1 0 1 1 1 0 Phosphohydrolase-associated domain Alanine_zipper PF11839.8 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.14 12.5 31.6 0.42 11.0 17.9 2.7 1 1 1 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein DUF4400 PF14348.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.41 10.1 3.6 0.54 9.7 3.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) PhoU PF01895.19 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.46 11.0 9.8 0.52 10.8 5.9 2.1 1 1 1 2 2 2 0 PhoU domain DUF948 PF06103.11 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.58 10.4 10.6 2.9 8.2 2.8 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) PCRF PF03462.18 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 1 9.2 16.8 1.4 8.8 16.8 1.2 1 0 0 1 1 1 0 PCRF domain HisKA_3 PF07730.13 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 1.1 9.8 8.6 2.9 8.5 2.2 2.3 1 1 1 2 2 2 0 Histidine kinase Metal_resist PF13801.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 1.2 9.3 15.5 1.5 9.0 15.5 1.2 1 0 0 1 1 1 0 Heavy-metal resistance FUSC PF04632.12 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 1.4 7.3 5.7 1.5 7.2 5.7 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family PmbA_TldD PF01523.16 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 2.7 7.7 9.6 3.1 7.6 9.6 1.1 1 0 0 1 1 1 0 Putative modulator of DNA gyrase AAA_11 PF13086.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 5.1 6.8 18.2 2.1 8.1 16.4 1.3 1 1 0 1 1 1 0 AAA domain DUF4398 PF14346.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 6.1 7.6 28.7 1.2 9.8 16.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4398) Peptidase_S64 PF08192.11 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 6.4 5.1 14.6 6.9 5.0 14.6 1.1 1 0 0 1 1 1 0 Peptidase family S64 T3SSipB PF16535.5 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 6.7 7.2 28.5 8.2 6.9 23.6 2.1 1 1 1 2 2 2 0 Type III cell invasion protein SipB Cluap1 PF10234.9 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 7.1 5.9 21.5 8.5 5.7 21.5 1.1 1 0 0 1 1 1 0 Clusterin-associated protein-1 Acetyltransf_6 PF13480.7 NODE_52685_length_338_cov_54.686469_g44761_i0forward_frame_1 - 0.066 13.4 0.0 0.078 13.1 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Cu-oxidase_4 PF02578.15 NODE_52678_length_338_cov_70.564356_g44754_i0reverse_frame_1 - 0.025 14.2 0.0 0.03 13.9 0.0 1.2 1 0 0 1 1 1 0 Multi-copper polyphenol oxidoreductase laccase Ank_2 PF12796.7 NODE_52674_length_338_cov_78.000000_g44750_i0forward_frame_1 - 2.8e-08 34.3 0.1 3.6e-08 33.9 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_52674_length_338_cov_78.000000_g44750_i0forward_frame_1 - 1.5e-06 28.4 0.3 0.0015 18.8 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_52674_length_338_cov_78.000000_g44750_i0forward_frame_1 - 1.5e-06 28.6 0.1 6.7e-05 23.4 0.1 1.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_52674_length_338_cov_78.000000_g44750_i0forward_frame_1 - 1.7e-05 25.1 1.0 0.066 13.7 0.1 2.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_52674_length_338_cov_78.000000_g44750_i0forward_frame_1 - 0.0015 18.8 0.0 3.8 8.4 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat DUF3287 PF11690.8 NODE_52673_length_338_cov_78.046205_g44749_i0forward_frame_1 - 0.2 11.4 0.0 0.27 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) Viral_DNA_Zn_bi PF03728.13 NODE_52672_length_338_cov_83.402640_g44748_i0forward_frame_1 - 0.072 13.7 0.0 0.11 13.1 0.0 1.2 1 0 0 1 1 1 0 Viral DNA-binding protein, zinc binding domain Comm PF15957.5 NODE_52664_length_338_cov_101.283828_g44740_i0forward_frame_1 - 0.036 14.4 0.0 0.044 14.1 0.0 1.2 1 0 0 1 1 1 0 Commissureless Insulin_TMD PF17870.1 NODE_52664_length_338_cov_101.283828_g44740_i0forward_frame_1 - 0.29 11.2 3.9 0.64 10.1 3.9 1.5 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment PhaP_Bmeg PF09602.10 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.003 17.5 3.7 0.0035 17.3 3.7 1.2 1 0 0 1 1 1 1 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) ABC_tran_CTD PF16326.5 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.011 16.0 12.1 0.017 15.4 0.1 2.9 2 1 1 3 3 3 0 ABC transporter C-terminal domain Syntaxin-6_N PF09177.11 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.015 15.8 2.6 0.023 15.2 2.5 1.4 1 1 0 1 1 1 0 Syntaxin 6, N-terminal HMMR_C PF15908.5 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.14 12.4 5.5 0.13 12.5 4.1 1.7 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal EzrA PF06160.12 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.19 9.8 8.0 0.37 8.9 8.0 1.4 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA ISG65-75 PF11727.8 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.52 9.5 6.2 1 8.5 4.9 1.8 1 1 1 2 2 2 0 Invariant surface glycoprotein VSG_B PF13206.6 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.96 8.6 6.2 2 7.6 6.2 1.4 1 1 0 1 1 1 0 Trypanosomal VSG domain MFMR_assoc PF16596.5 NODE_52657_length_338_cov_132.613861_g44733_i0forward_frame_1 - 0.042 14.3 0.2 0.056 13.9 0.2 1.2 1 0 0 1 1 1 0 Disordered region downstream of MFMR Tweety PF04906.13 NODE_52653_length_338_cov_170.709571_g44729_i0reverse_frame_1 - 0.049 12.3 0.3 0.058 12.1 0.3 1.0 1 0 0 1 1 1 0 Tweety Yos1 PF08571.10 NODE_52651_length_338_cov_215.343234_g44727_i0forward_frame_1 - 1.2e-17 63.9 0.0 1.5e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 Yos1-like Cadherin_C_2 PF16492.5 NODE_52641_length_338_cov_821.432343_g44718_i0forward_frame_1 - 0.14 12.9 0.1 0.19 12.5 0.1 1.2 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal Thiolase_C PF02803.18 NODE_52637_length_338_cov_4315.943894_g44715_i0reverse_frame_1 - 0.14 11.8 1.0 0.2 11.3 1.0 1.2 1 0 0 1 1 1 0 Thiolase, C-terminal domain DUF1071 PF06378.11 NODE_52637_length_338_cov_4315.943894_g44715_i0forward_frame_1 - 0.11 12.1 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) Arnt_C PF18583.1 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.004 16.8 0.4 0.005 16.4 0.4 1.2 1 0 0 1 1 1 1 Aminoarabinose transferase C-terminal domain HALZ PF02183.18 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.0064 16.7 8.7 0.039 14.2 0.2 2.9 2 2 2 4 4 4 2 Homeobox associated leucine zipper CENP-F_leu_zip PF10473.9 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.024 14.7 10.0 0.052 13.6 8.1 1.7 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4672 PF15716.5 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.034 13.8 0.7 0.045 13.4 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) UPF0184 PF03670.13 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.18 12.2 1.8 1.9 8.9 0.4 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) APG6_N PF17675.1 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 1.3 9.5 13.2 9 6.8 13.1 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region DivIC PF04977.15 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 2.3 8.1 9.6 0.78 9.6 3.8 2.2 1 1 0 2 2 2 0 Septum formation initiator MSL1_dimer PF16801.5 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 3.3 7.5 8.8 0.62 9.9 5.0 1.9 2 0 0 2 2 2 0 Dimerisation domain of Male-specific-Lethal 1 CK1gamma_C PF12605.8 NODE_52628_length_339_cov_1.506579_g44706_i0reverse_frame_1 - 0.059 14.5 5.3 0.075 14.2 5.3 1.1 1 0 0 1 1 1 0 Casein kinase 1 gamma C terminal DIM1 PF02966.16 NODE_52627_length_339_cov_1.569079_g44705_i0reverse_frame_1 - 0.023 14.5 0.4 0.027 14.2 0.4 1.2 1 0 0 1 1 1 0 Mitosis protein DIM1 Bim_N PF06773.11 NODE_52614_length_339_cov_2.157895_g44692_i0reverse_frame_1 - 0.02 14.5 26.4 0.44 10.3 2.7 4.9 2 2 2 4 4 4 0 Bim protein N-terminus Transthyretin PF00576.21 NODE_52609_length_339_cov_2.292763_g44687_i0reverse_frame_1 - 4.1e-09 37.1 0.1 7.6e-09 36.2 0.1 1.4 1 0 0 1 1 1 1 HIUase/Transthyretin family bMG3 PF11974.8 NODE_52609_length_339_cov_2.292763_g44687_i0reverse_frame_1 - 0.0015 18.5 0.1 0.0023 17.9 0.1 1.3 1 0 0 1 1 1 1 Bacterial alpha-2-macroglobulin MG3 domain CarboxypepD_reg PF13620.6 NODE_52609_length_339_cov_2.292763_g44687_i0reverse_frame_1 - 0.022 15.0 0.0 0.038 14.2 0.0 1.3 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain Big_1 PF02369.16 NODE_52609_length_339_cov_2.292763_g44687_i0reverse_frame_1 - 0.023 14.7 0.2 0.033 14.2 0.2 1.2 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) TTL PF03133.15 NODE_52607_length_339_cov_2.358553_g44685_i0reverse_frame_1 - 7.8e-15 54.8 0.2 9.2e-15 54.5 0.2 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_ST PF14397.6 NODE_52607_length_339_cov_2.358553_g44685_i0reverse_frame_1 - 0.0082 15.4 0.0 0.01 15.1 0.0 1.1 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 NODE_52607_length_339_cov_2.358553_g44685_i0reverse_frame_1 - 0.0085 15.4 0.0 0.013 14.8 0.0 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp Dala_Dala_lig_C PF07478.13 NODE_52607_length_339_cov_2.358553_g44685_i0reverse_frame_1 - 0.038 13.5 0.0 0.046 13.2 0.0 1.2 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus Noc2 PF03715.13 NODE_52605_length_339_cov_2.483553_g44683_i0reverse_frame_1 - 2e-17 63.4 6.2 2.2e-17 63.3 6.2 1.0 1 0 0 1 1 1 1 Noc2p family DUF3487 PF11990.8 NODE_52604_length_339_cov_2.565789_g44682_i0forward_frame_1 - 0.012 15.5 0.4 0.015 15.2 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) IgGFc_binding PF17517.2 NODE_52598_length_339_cov_2.799342_g44676_i0forward_frame_1 - 0.056 12.7 0.0 0.061 12.6 0.0 1.1 1 0 0 1 1 1 0 IgGFc binding protein DUF3325 PF11804.8 NODE_52594_length_339_cov_3.417763_g44672_i0forward_frame_1 - 0.16 12.2 0.0 0.26 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) DnaB_bind PF10410.9 NODE_52585_length_339_cov_26.032895_g44663_i0forward_frame_1 - 0.019 15.1 0.0 0.031 14.5 0.0 1.4 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase DUF3014 PF11219.8 NODE_52583_length_339_cov_43.713816_g44661_i0forward_frame_1 - 0.081 13.2 0.0 0.097 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3014) DUF357 PF04010.13 NODE_52583_length_339_cov_43.713816_g44661_i0forward_frame_1 - 0.18 11.9 0.0 0.35 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF357) PgaD PF13994.6 NODE_52574_length_339_cov_58.634868_g44652_i0reverse_frame_1 - 2.7 8.0 7.4 0.25 11.4 2.6 1.6 1 1 1 2 2 2 0 PgaD-like protein UPF0225 PF17775.1 NODE_52574_length_339_cov_58.634868_g44652_i0forward_frame_1 - 0.025 15.4 6.1 0.21 12.4 6.1 2.1 1 1 0 1 1 1 0 UPF0225 domain STAT_alpha PF01017.20 NODE_52566_length_339_cov_70.782895_g44644_i0reverse_frame_1 - 0.021 14.8 1.1 0.027 14.4 1.1 1.2 1 0 0 1 1 1 0 STAT protein, all-alpha domain Fungal_KA1 PF16797.5 NODE_52566_length_339_cov_70.782895_g44644_i0reverse_frame_1 - 0.059 13.1 0.7 0.24 11.1 0.4 1.8 2 0 0 2 2 2 0 Fungal kinase associated-1 domain RsdA_SigD_bd PF16751.5 NODE_52566_length_339_cov_70.782895_g44644_i0reverse_frame_1 - 0.1 12.9 0.1 0.19 12.0 0.1 1.4 1 0 0 1 1 1 0 Anti-sigma-D factor RsdA to sigma factor binding region Adenylate_cycl PF01295.18 NODE_52566_length_339_cov_70.782895_g44644_i0reverse_frame_1 - 0.18 10.4 0.9 0.21 10.2 0.9 1.0 1 0 0 1 1 1 0 Adenylate cyclase, class-I SecIII_SopE_N PF05364.14 NODE_52562_length_339_cov_74.108553_g44640_i0reverse_frame_1 - 0.038 14.1 0.2 0.065 13.3 0.2 1.4 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus DUF2757 PF10955.8 NODE_52560_length_339_cov_75.934211_g44638_i0forward_frame_1 - 0.016 15.5 0.3 0.026 14.8 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2757) JHBP PF06585.11 NODE_52555_length_339_cov_79.855263_g44633_i0reverse_frame_1 - 0.03 13.5 0.0 0.036 13.2 0.0 1.0 1 0 0 1 1 1 0 Haemolymph juvenile hormone binding protein (JHBP) SPARC_Ca_bdg PF10591.9 NODE_52554_length_339_cov_80.351974_g44632_i0reverse_frame_1 - 0.011 16.0 0.1 0.016 15.5 0.1 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Gly_rich_SFCGS PF14272.6 NODE_52551_length_339_cov_82.388158_g44629_i0forward_frame_1 - 0.065 13.3 0.3 0.69 10.0 0.1 2.0 1 1 1 2 2 2 0 Glycine-rich SFCGS GAT PF03127.14 NODE_52551_length_339_cov_82.388158_g44629_i0forward_frame_1 - 0.097 13.0 1.7 0.16 12.3 1.7 1.3 1 0 0 1 1 1 0 GAT domain Saf_2TM PF18303.1 NODE_52549_length_339_cov_88.792763_g44627_i0forward_frame_1 - 0.39 10.3 8.5 0.13 11.8 4.7 1.9 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain Statherin PF03875.13 NODE_52544_length_339_cov_98.016447_g44622_i0reverse_frame_1 - 0.028 14.5 1.5 0.05 13.7 0.0 2.0 2 0 0 2 2 2 0 Statherin WD40 PF00400.32 NODE_52544_length_339_cov_98.016447_g44622_i0forward_frame_1 - 0.00016 22.4 1.2 0.0027 18.5 0.0 2.5 2 1 0 2 2 2 1 WD domain, G-beta repeat MASE2 PF05230.11 NODE_52537_length_339_cov_138.523026_g44615_i0forward_frame_1 - 0.13 12.3 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 MASE2 domain YMF19 PF02326.15 NODE_52536_length_339_cov_139.213816_g44614_i0forward_frame_1 - 0.12 13.1 0.9 0.15 12.8 0.9 1.3 1 0 0 1 1 1 0 Plant ATP synthase F0 His_Phos_1 PF00300.22 NODE_52534_length_339_cov_161.125000_g44612_i0reverse_frame_1 - 0.0008 19.1 0.0 0.0011 18.6 0.0 1.3 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Lipase_3 PF01764.25 NODE_52534_length_339_cov_161.125000_g44612_i0reverse_frame_1 - 0.13 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Lipase (class 3) DUF1776 PF08643.10 NODE_52534_length_339_cov_161.125000_g44612_i0reverse_frame_1 - 0.19 11.0 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) PhoLip_ATPase_N PF16209.5 NODE_52532_length_339_cov_226.871711_g40000_i1reverse_frame_1 - 0.1 12.3 1.5 0.15 11.7 0.1 1.9 2 0 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal Glyco_hydro_38N PF01074.22 NODE_52531_length_339_cov_637.358553_g44610_i0reverse_frame_1 - 2.4e-09 37.0 0.4 2.4e-09 37.0 0.4 1.9 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain COX7a PF02238.15 NODE_52531_length_339_cov_637.358553_g44610_i0reverse_frame_1 - 0.012 16.0 0.2 0.032 14.6 0.1 1.7 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII Phtf-FEM1B_bdg PF12129.8 NODE_52531_length_339_cov_637.358553_g44610_i0forward_frame_1 - 0.46 10.3 4.3 0.6 9.9 4.3 1.1 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor DUF4799 PF16056.5 NODE_52530_length_339_cov_792.884868_g44609_i0forward_frame_1 - 0.034 13.3 0.2 0.039 13.1 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4799) Paramyxo_NS_C PF02725.14 NODE_52523_length_340_cov_1.400000_g44602_i0reverse_frame_3 - 0.089 12.9 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Non-structural protein C zf-rbx1 PF12678.7 NODE_52523_length_340_cov_1.400000_g44602_i0reverse_frame_2 - 0.00046 20.4 2.0 0.00052 20.3 1.0 1.7 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_52523_length_340_cov_1.400000_g44602_i0reverse_frame_2 - 0.0035 17.6 0.3 0.0058 16.9 0.3 1.4 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 NODE_52523_length_340_cov_1.400000_g44602_i0reverse_frame_2 - 0.018 15.1 0.1 0.029 14.4 0.1 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 NODE_52523_length_340_cov_1.400000_g44602_i0reverse_frame_2 - 0.11 12.3 0.1 0.21 11.5 0.1 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) tRNA-synt_His PF13393.6 NODE_52521_length_340_cov_1.439344_g44600_i0forward_frame_3 - 1.9e-09 37.3 0.0 2.2e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase NTP_transf_7 PF07984.12 NODE_52521_length_340_cov_1.439344_g44600_i0forward_frame_3 - 0.023 14.0 0.7 0.026 13.8 0.7 1.1 1 0 0 1 1 1 0 Nucleotidyltransferase tRNA-synt_2b PF00587.25 NODE_52521_length_340_cov_1.439344_g44600_i0forward_frame_3 - 0.063 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) Herpes_LMP1 PF05297.11 NODE_52520_length_340_cov_1.531148_g44599_i0forward_frame_2 - 0.67 9.1 3.7 0.75 8.9 3.7 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DJ-1_PfpI PF01965.24 NODE_52517_length_340_cov_1.790164_g44596_i0forward_frame_2 - 0.00062 19.6 0.1 0.00075 19.3 0.1 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family Catalase_C PF18011.1 NODE_52517_length_340_cov_1.790164_g44596_i0forward_frame_2 - 0.00088 18.9 0.1 0.001 18.7 0.1 1.1 1 0 0 1 1 1 1 C-terminal domain found in long catalases DUF898 PF05987.13 NODE_52513_length_340_cov_1.960656_g44592_i0reverse_frame_3 - 0.00019 20.6 4.2 0.00021 20.4 4.2 1.2 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF898) Usg PF06233.12 NODE_52513_length_340_cov_1.960656_g44592_i0forward_frame_2 - 0.0028 17.7 1.4 0.0051 16.9 1.4 1.3 1 0 0 1 1 1 1 Usg-like family Chordopox_A30L PF06015.12 NODE_52512_length_340_cov_1.983607_g44591_i0forward_frame_3 - 0.028 14.3 1.6 0.028 14.3 1.6 1.8 1 1 1 2 2 2 0 Chordopoxvirus A30L protein Glycos_transf_3 PF00591.21 NODE_52511_length_340_cov_2.029508_g44590_i0forward_frame_2 - 4.5e-53 180.4 0.0 4.9e-53 180.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Vpu PF00558.19 NODE_52509_length_340_cov_2.154098_g44588_i0reverse_frame_2 - 0.0051 16.5 0.1 0.0079 15.9 0.1 1.3 1 0 0 1 1 1 1 Vpu protein ROQ_II PF18386.1 NODE_52509_length_340_cov_2.154098_g44588_i0reverse_frame_2 - 0.033 14.0 0.6 0.071 13.0 0.1 1.8 2 0 0 2 2 2 0 Roquin II domain MTABC_N PF16185.5 NODE_52505_length_340_cov_2.272131_g44584_i0reverse_frame_2 - 0.22 11.0 0.0 0.28 10.6 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region DUF1084 PF06454.11 NODE_52504_length_340_cov_2.288525_g44583_i0reverse_frame_2 - 0.018 14.4 0.2 0.022 14.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks206.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks206.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks206.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks206.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ldh_2 PF02615.14 NODE_52501_length_340_cov_2.481967_g44580_i0forward_frame_2 - 0.00082 18.6 0.1 0.0018 17.5 0.0 1.6 2 0 0 2 2 2 1 Malate/L-lactate dehydrogenase DUF4694 PF15765.5 NODE_52498_length_340_cov_2.862295_g44577_i0forward_frame_3 - 0.13 12.2 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) DUF1231 PF06802.11 NODE_52497_length_340_cov_2.950820_g44576_i0forward_frame_2 - 0.0074 15.4 3.2 0.0084 15.3 3.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1231) DUF5391 PF17369.2 NODE_52496_length_340_cov_3.127869_g44575_i0forward_frame_3 - 0.019 15.0 5.7 0.029 14.4 5.4 1.4 1 1 1 2 2 2 0 Family of unknown function (DUF5391) E1-E2_ATPase PF00122.20 NODE_52496_length_340_cov_3.127869_g44575_i0forward_frame_3 - 0.54 9.8 2.3 0.68 9.4 2.3 1.1 1 0 0 1 1 1 0 E1-E2 ATPase YitT_membrane PF02588.15 NODE_52495_length_340_cov_3.222951_g44574_i0reverse_frame_3 - 0.14 11.5 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Tax PF02959.16 NODE_52495_length_340_cov_3.222951_g44574_i0forward_frame_2 - 0.074 12.5 0.0 0.082 12.3 0.0 1.1 1 0 0 1 1 1 0 HTLV Tax UPF0061 PF02696.14 NODE_52493_length_340_cov_3.593443_g44572_i0reverse_frame_2 - 2e-16 59.9 0.7 2.1e-16 59.8 0.7 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, YdiU/UPF0061 family DUF775 PF05603.12 NODE_52493_length_340_cov_3.593443_g44572_i0reverse_frame_2 - 0.03 13.9 0.0 0.035 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF775) Arg_decarbox_C PF17944.1 NODE_52493_length_340_cov_3.593443_g44572_i0reverse_frame_2 - 0.045 14.3 1.1 1.3 9.6 0.0 2.4 2 1 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension Rep_1 PF01446.17 NODE_52493_length_340_cov_3.593443_g44572_i0forward_frame_2 - 4.8 6.6 7.9 0.88 9.0 0.1 2.0 1 1 1 2 2 2 0 Replication protein MazE_antitoxin PF04014.18 NODE_52492_length_340_cov_3.649180_g44571_i0reverse_frame_3 - 0.12 12.3 0.2 0.32 11.0 0.2 1.7 1 1 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin DUF1744 PF08490.12 NODE_52492_length_340_cov_3.649180_g44571_i0forward_frame_2 - 0.041 12.5 0.3 0.046 12.3 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1744) Titin_Ig-rpts PF06582.12 NODE_52489_length_340_cov_10.803279_g44568_i0reverse_frame_2 - 0.17 11.9 4.6 15 5.6 0.3 3.3 3 0 0 3 3 3 0 Titin repeat CAP18_C PF12153.8 NODE_52489_length_340_cov_10.803279_g44568_i0forward_frame_2 - 0.079 12.8 1.9 9.8 6.1 0.2 2.1 2 0 0 2 2 2 0 LPS binding domain of CAP18 (C terminal) Ndr PF03096.14 NODE_52476_length_340_cov_64.718033_g44555_i0reverse_frame_2 - 0.064 11.9 0.2 0.072 11.8 0.2 1.0 1 0 0 1 1 1 0 Ndr family Telomere_res PF16684.5 NODE_52475_length_340_cov_67.829508_g44554_i0reverse_frame_3 - 0.0065 16.0 0.0 0.0094 15.5 0.0 1.2 1 0 0 1 1 1 1 Telomere resolvase YdfZ PF14001.6 NODE_52473_length_340_cov_73.626230_g44552_i0forward_frame_3 - 0.14 12.6 0.5 0.27 11.7 0.2 1.6 2 0 0 2 2 2 0 YdfZ protein Phosducin PF02114.16 NODE_52473_length_340_cov_73.626230_g44552_i0forward_frame_2 - 0.14 11.1 7.0 0.15 11.0 7.0 1.1 1 0 0 1 1 1 0 Phosducin Presenilin PF01080.17 NODE_52473_length_340_cov_73.626230_g44552_i0forward_frame_2 - 3.8 6.2 14.1 4 6.1 14.1 1.0 1 0 0 1 1 1 0 Presenilin DUF413 PF04219.12 NODE_52468_length_340_cov_92.898361_g44547_i0reverse_frame_3 - 0.18 11.9 0.6 0.29 11.2 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF DUF1378 PF07125.11 NODE_52467_length_340_cov_94.485246_g44546_i0reverse_frame_3 - 3.3 8.0 4.6 1 9.6 0.1 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1378) DUF2207 PF09972.9 NODE_52465_length_340_cov_105.095082_g44544_i0forward_frame_2 - 4.2 6.0 6.5 4.9 5.8 6.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Microvir_J PF04726.13 NODE_52464_length_340_cov_119.836066_g44543_i0reverse_frame_2 - 0.13 12.2 1.2 0.22 11.5 0.1 1.9 2 0 0 2 2 2 0 Microvirus J protein AP3D1 PF06375.11 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.46 10.7 19.3 0.6 10.3 19.3 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 FAM176 PF14851.6 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.67 9.6 3.8 0.77 9.4 3.8 1.2 1 0 0 1 1 1 0 FAM176 family Zip PF02535.22 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.88 8.7 5.3 0.88 8.7 5.3 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.9 8.2 5.3 0.81 8.4 5.3 1.0 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 1.4 7.1 10.7 1.4 7.1 10.7 1.0 1 0 0 1 1 1 0 CDC45-like protein Ferlin_C PF16165.5 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 2 8.3 8.1 2.4 8.1 8.1 1.3 1 0 0 1 1 1 0 Ferlin C-terminus Peptidase_S49_N PF08496.10 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 3.1 7.9 11.6 3.8 7.6 11.6 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Sec62 PF03839.16 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 4.2 6.8 11.7 4.4 6.8 11.7 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Connexin PF00029.19 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 7.5 6.2 8.6 8.2 6.1 8.6 1.1 1 0 0 1 1 1 0 Connexin Tetraspanin PF00335.20 NODE_52463_length_340_cov_119.963934_g44542_i0forward_frame_3 - 3.1 7.5 10.9 3.5 7.3 10.9 1.1 1 0 0 1 1 1 0 Tetraspanin family HemY_N PF07219.13 NODE_52463_length_340_cov_119.963934_g44542_i0forward_frame_3 - 9.9 6.4 7.6 14 6.0 7.6 1.3 1 0 0 1 1 1 0 HemY protein N-terminus DUF2556 PF10831.8 NODE_52459_length_340_cov_130.914754_g44538_i0reverse_frame_2 - 0.24 11.3 4.5 0.38 10.7 1.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2556) DUF3220 PF11516.8 NODE_52457_length_340_cov_167.147541_g44536_i0forward_frame_2 - 0.15 12.3 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) Cas_Cas02710 PF09670.10 NODE_52453_length_340_cov_182.583607_g44532_i0reverse_frame_3 - 0.066 12.0 0.0 0.076 11.8 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) zf-LSD1 PF06943.12 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.00031 20.5 6.7 0.11 12.3 0.1 3.3 3 0 0 3 3 3 2 LSD1 zinc finger eIF-5_eIF-2B PF01873.17 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.015 15.2 5.5 0.043 13.7 0.6 2.2 1 1 1 2 2 2 0 Domain found in IF2B/IF5 zinc_ribbon_6 PF14599.6 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.025 14.6 0.7 0.025 14.6 0.7 2.4 2 1 1 3 3 3 0 Zinc-ribbon zinc_ribbon_4 PF13717.6 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.034 14.1 4.3 7.9 6.5 0.0 3.3 4 0 0 4 4 4 0 zinc-ribbon domain zinc_ribbon_12 PF11331.8 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.083 12.7 2.7 2.1 8.2 0.0 2.7 2 1 0 2 2 2 0 Probable zinc-ribbon domain zf-Sec23_Sec24 PF04810.15 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.18 11.8 6.5 19 5.4 0.0 3.5 4 0 0 4 4 4 0 Sec23/Sec24 zinc finger Elf1 PF05129.13 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.31 11.1 3.6 3.8 7.6 0.2 2.3 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zinc_ribbon_5 PF13719.6 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.4 10.5 5.9 2.1 8.2 0.1 3.2 3 1 0 3 3 3 0 zinc-ribbon domain YABBY PF04690.13 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 6.7 7.2 8.7 14 6.2 0.3 2.1 1 1 1 2 2 2 0 YABBY protein Herpes_BBRF1 PF04793.12 NODE_52447_length_340_cov_361.865574_g44526_i0reverse_frame_3 - 0.088 11.8 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 BRRF1-like protein TgMIC1 PF11476.8 NODE_52446_length_340_cov_1011.334426_g44525_i0reverse_frame_3 - 0.042 13.6 0.2 0.05 13.3 0.2 1.1 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 DUF2093 PF09866.9 NODE_52446_length_340_cov_1011.334426_g44525_i0reverse_frame_3 - 0.13 11.7 0.2 0.28 10.6 0.1 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2093) GST_C PF00043.25 NODE_52444_length_340_cov_17873.754098_g44523_i0reverse_frame_3 - 0.99 9.7 3.8 0.8 10.0 0.4 2.0 1 1 1 2 2 2 0 Glutathione S-transferase, C-terminal domain DUF4079 PF13301.6 NODE_52444_length_340_cov_17873.754098_g44523_i0forward_frame_2 - 0.49 10.6 3.4 2.9 8.0 3.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) VF530 PF09905.9 NODE_52442_length_341_cov_1.071895_g44521_i0reverse_frame_3 - 0.1 12.8 0.0 0.16 12.2 0.0 1.5 1 1 0 1 1 1 0 DNA-binding protein VF530 DUF3127 PF11325.8 NODE_52440_length_341_cov_1.411765_g44519_i0reverse_frame_2 - 0.05 13.8 0.1 0.071 13.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3127) Denso_VP4 PF02336.15 NODE_52440_length_341_cov_1.411765_g44519_i0reverse_frame_2 - 0.12 11.3 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 Capsid protein VP4 AAT PF03417.16 NODE_52436_length_341_cov_1.594771_g44515_i0forward_frame_2 - 0.042 13.5 1.5 0.045 13.4 1.5 1.1 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase DUF87 PF01935.17 NODE_52436_length_341_cov_1.594771_g44515_i0forward_frame_2 - 0.069 13.2 2.1 0.075 13.1 2.1 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain DIT1_PvcA PF05141.12 NODE_52436_length_341_cov_1.594771_g44515_i0forward_frame_2 - 0.085 12.3 4.2 0.089 12.2 4.2 1.0 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein DUF3381 PF11861.8 NODE_52435_length_341_cov_1.715686_g44514_i0reverse_frame_2 - 0.01 15.7 7.9 0.013 15.3 7.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) PGA2 PF07543.12 NODE_52435_length_341_cov_1.715686_g44514_i0reverse_frame_2 - 0.025 14.5 3.4 0.03 14.3 3.4 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 BRF1 PF07741.13 NODE_52435_length_341_cov_1.715686_g44514_i0reverse_frame_2 - 0.037 14.4 0.2 0.037 14.4 0.2 2.8 2 1 0 2 2 2 0 Brf1-like TBP-binding domain RFC1 PF08519.12 NODE_52429_length_341_cov_1.941176_g44508_i0reverse_frame_2 - 0.031 14.5 0.2 0.08 13.1 0.2 1.7 1 1 1 2 2 2 0 Replication factor RFC1 C terminal domain Pex19 PF04614.12 NODE_52429_length_341_cov_1.941176_g44508_i0reverse_frame_2 - 0.052 13.3 0.3 0.061 13.1 0.3 1.1 1 0 0 1 1 1 0 Pex19 protein family RicinB_lectin_2 PF14200.6 NODE_52426_length_341_cov_2.084967_g44505_i0reverse_frame_2 - 4.7e-08 33.7 1.1 0.00056 20.6 0.1 2.1 1 1 0 2 2 2 2 Ricin-type beta-trefoil lectin domain-like SPC22 PF04573.12 NODE_52422_length_341_cov_2.176471_g44501_i0reverse_frame_2 - 0.0021 17.5 0.0 0.0021 17.5 0.0 1.2 1 0 0 1 1 1 1 Signal peptidase subunit Molybdopterin PF00384.22 NODE_52421_length_341_cov_2.179739_g44500_i0reverse_frame_3 - 0.0025 16.8 0.0 0.0028 16.7 0.0 1.2 1 1 0 1 1 1 1 Molybdopterin oxidoreductase VWA_CoxE PF05762.14 NODE_52421_length_341_cov_2.179739_g44500_i0reverse_frame_3 - 0.028 13.8 0.0 0.033 13.6 0.0 1.1 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein SIS PF01380.22 NODE_52421_length_341_cov_2.179739_g44500_i0reverse_frame_3 - 0.13 12.1 0.0 0.29 11.0 0.0 1.5 1 1 1 2 2 2 0 SIS domain DUF779 PF05610.11 NODE_52410_length_341_cov_2.849673_g44489_i0reverse_frame_2 - 0.18 12.0 0.1 12 6.2 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF779) S1 PF00575.23 NODE_52410_length_341_cov_2.849673_g44489_i0forward_frame_3 - 9.2e-22 77.2 0.4 1.2e-21 76.8 0.4 1.2 1 0 0 1 1 1 1 S1 RNA binding domain PCB_OB PF17092.5 NODE_52410_length_341_cov_2.849673_g44489_i0forward_frame_3 - 0.00031 21.5 0.0 0.00036 21.2 0.0 1.2 1 0 0 1 1 1 1 Penicillin-binding protein OB-like domain S1_2 PF13509.6 NODE_52410_length_341_cov_2.849673_g44489_i0forward_frame_3 - 0.12 12.5 0.5 0.57 10.3 0.5 1.9 1 1 0 1 1 1 0 S1 domain COX7C PF02935.16 NODE_52409_length_341_cov_2.875817_g44488_i0forward_frame_2 - 0.072 13.4 1.5 0.13 12.6 1.5 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc DUF1090 PF06476.12 NODE_52407_length_341_cov_2.921569_g44486_i0reverse_frame_2 - 4.8e-09 36.3 0.2 6e-09 36.0 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1090) Usher PF00577.20 NODE_52406_length_341_cov_2.931373_g44485_i0forward_frame_2 - 1.3e-50 172.8 1.2 1.4e-50 172.7 1.2 1.0 1 0 0 1 1 1 1 Outer membrane usher protein Sigma54_activat PF00158.26 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 2.5e-50 170.5 0.0 2.7e-50 170.3 0.0 1.0 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 5.7e-07 29.7 0.0 1.7e-06 28.2 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 0.00018 21.5 0.0 0.0002 21.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 0.0048 16.3 0.0 0.0064 15.9 0.0 1.1 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 0.038 14.4 0.0 0.045 14.2 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 0.064 13.1 0.0 0.076 12.9 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Aldedh PF00171.22 NODE_52401_length_341_cov_3.457516_g44480_i0forward_frame_2 - 0.013 14.0 0.8 0.015 13.9 0.8 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family TPR_1 PF00515.28 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.0094 15.7 0.1 0.025 14.4 0.1 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.012 15.3 0.1 0.026 14.2 0.1 1.6 1 0 0 1 1 1 0 TPR repeat TPR_2 PF07719.17 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.046 13.8 0.4 0.13 12.4 0.1 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat NES_C_h PF18208.1 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.072 13.4 13.6 0.14 12.4 13.6 1.5 1 1 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain TPR_8 PF13181.6 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.096 12.9 3.0 2 8.8 0.0 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF3984 PF13136.6 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.3 10.4 3.7 0.34 10.3 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3984) MMtag PF10159.9 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 9.7 6.6 10.3 0.74 10.1 5.0 1.9 2 1 0 2 2 2 0 Multiple myeloma tumor-associated Imm43 PF15570.6 NODE_52398_length_341_cov_3.467320_g44477_i0forward_frame_2 - 0.11 12.6 3.1 0.12 12.4 2.4 1.4 1 1 0 1 1 1 0 Immunity protein 43 DUF2512 PF10710.9 NODE_52398_length_341_cov_3.467320_g44477_i0forward_frame_2 - 2.5 7.7 9.5 3.7 7.2 9.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2512) Pkinase_C PF00433.24 NODE_52392_length_341_cov_27.513072_g44471_i0reverse_frame_3 - 0.083 13.6 4.6 0.14 12.9 4.6 1.4 1 0 0 1 1 1 0 Protein kinase C terminal domain PuR_N PF09182.10 NODE_52392_length_341_cov_27.513072_g44471_i0forward_frame_2 - 0.13 12.2 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal TetR_C_31 PF17940.1 NODE_52390_length_341_cov_45.055556_g44469_i0forward_frame_3 - 0.095 12.9 0.1 0.13 12.5 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF2149 PF09919.9 NODE_52389_length_341_cov_50.973856_g44468_i0reverse_frame_2 - 2.2 8.6 7.4 9.1 6.6 0.7 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2149) DUF2405 PF10293.9 NODE_52389_length_341_cov_50.973856_g44468_i0forward_frame_3 - 1 9.3 4.7 0.51 10.3 0.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2405) DUF2430 PF10353.9 NODE_52389_length_341_cov_50.973856_g44468_i0forward_frame_3 - 3.5 8.1 8.8 0.22 11.9 2.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2430) NPCC PF08058.11 NODE_52383_length_341_cov_64.924837_g44462_i0forward_frame_2 - 9.2 6.3 9.8 4.6 7.3 3.6 2.0 1 1 1 2 2 2 0 Nuclear pore complex component TMEM237 PF15383.6 NODE_52381_length_341_cov_74.601307_g44460_i0reverse_frame_2 - 3.5 6.7 11.6 4.8 6.2 11.6 1.3 1 0 0 1 1 1 0 Transmembrane protein 237 Sel1 PF08238.12 NODE_52380_length_341_cov_74.823529_g44459_i0reverse_frame_3 - 1.9e-08 34.7 0.2 4.4e-08 33.5 0.2 1.6 1 0 0 1 1 1 1 Sel1 repeat MAR_sialic_bdg PF10564.9 NODE_52367_length_341_cov_174.088235_g44446_i0reverse_frame_3 - 0.0071 16.4 0.2 0.01 15.8 0.2 1.2 1 0 0 1 1 1 1 Sialic-acid binding micronemal adhesive repeat TetR_C_33 PF13305.6 NODE_52367_length_341_cov_174.088235_g44446_i0forward_frame_2 - 0.12 13.1 0.0 0.15 12.8 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain zf-met PF12874.7 NODE_52357_length_341_cov_17815.294118_g44436_i0forward_frame_2 - 0.26 11.7 2.1 10 6.7 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Gag_p24 PF00607.20 NODE_52355_length_342_cov_1.537459_g44434_i0forward_frame_3 - 0.027 14.3 0.0 0.03 14.2 0.0 1.1 1 0 0 1 1 1 0 gag gene protein p24 (core nucleocapsid protein) Cmc1 PF08583.10 NODE_52355_length_342_cov_1.537459_g44434_i0forward_frame_3 - 0.046 13.7 0.2 0.089 12.8 0.2 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like DUF2428 PF10350.9 NODE_52354_length_342_cov_1.602606_g44433_i0reverse_frame_3 - 0.1 11.9 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 Putative death-receptor fusion protein (DUF2428) Flp1_like PF16982.5 NODE_52349_length_342_cov_2.013029_g44428_i0reverse_frame_3 - 0.087 12.2 0.1 0.19 11.2 0.1 1.5 1 1 0 1 1 1 0 Putative Flagellin, Flp1-like, domain DUF4318 PF14201.6 NODE_52349_length_342_cov_2.013029_g44428_i0reverse_frame_2 - 0.14 12.6 0.1 0.99 9.9 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4318) Acyl-CoA_ox_N PF14749.6 NODE_52348_length_342_cov_2.273616_g44427_i0forward_frame_2 - 0.13 12.8 0.0 0.23 12.0 0.0 1.3 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal DUF1318 PF07027.12 NODE_52343_length_342_cov_2.361564_g44422_i0reverse_frame_2 - 1.6e-18 66.9 1.1 2.2e-18 66.5 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1318) PatG_C PF18065.1 NODE_52343_length_342_cov_2.361564_g44422_i0reverse_frame_2 - 0.067 13.2 0.0 0.094 12.7 0.0 1.3 1 0 0 1 1 1 0 PatG C-terminal DUF2774 PF11242.8 NODE_52343_length_342_cov_2.361564_g44422_i0reverse_frame_2 - 0.1 12.8 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) Sin3_corepress PF08295.12 NODE_52343_length_342_cov_2.361564_g44422_i0forward_frame_3 - 0.12 12.5 0.0 6.4 6.9 0.0 2.1 2 0 0 2 2 2 0 Sin3 family co-repressor 7tm_1 PF00001.21 NODE_52338_length_342_cov_2.902280_g44417_i0reverse_frame_3 - 0.04 13.3 3.0 0.044 13.1 3.0 1.2 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) Kinesin PF00225.23 NODE_52337_length_342_cov_2.902280_g44416_i0forward_frame_3 - 1.1e-17 64.0 0.0 1.3e-17 63.7 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Tmem26 PF09772.9 NODE_52334_length_342_cov_3.061889_g44413_i0reverse_frame_3 - 0.01 15.2 1.3 0.011 15.1 1.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 26 PP2C PF00481.21 NODE_52333_length_342_cov_3.149837_g44412_i0reverse_frame_2 - 4.9e-24 85.4 0.0 5.3e-24 85.3 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 NODE_52333_length_342_cov_3.149837_g44412_i0reverse_frame_2 - 0.0019 17.9 0.0 0.0021 17.7 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C WD40_alt PF14077.6 NODE_52333_length_342_cov_3.149837_g44412_i0forward_frame_3 - 0.12 12.2 0.1 0.22 11.4 0.1 1.4 1 0 0 1 1 1 0 Alternative WD40 repeat motif DUF3418 PF11898.8 NODE_52332_length_342_cov_3.179153_g44411_i0forward_frame_3 - 1.3e-10 40.7 0.0 1.5e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) LcrG PF07216.12 NODE_52331_length_342_cov_3.250814_g44410_i0reverse_frame_2 - 0.0071 16.2 0.6 0.065 13.2 0.1 2.0 2 0 0 2 2 2 1 LcrG protein Peptidase_C33 PF05412.12 NODE_52331_length_342_cov_3.250814_g44410_i0reverse_frame_2 - 0.077 13.0 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 Equine arterivirus Nsp2-type cysteine proteinase Myb_DNA-binding PF00249.31 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_2 - 7.2e-09 35.7 0.0 1.1e-08 35.1 0.0 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_2 - 0.034 14.0 0.1 0.034 14.0 0.1 1.9 2 0 0 2 2 2 0 Myb DNA-binding like MFS_1 PF07690.16 NODE_52326_length_342_cov_6.156352_g44405_i0forward_frame_3 - 6.8e-18 64.7 7.6 7.6e-18 64.5 7.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_52326_length_342_cov_6.156352_g44405_i0forward_frame_3 - 4.5e-06 25.8 5.5 4.9e-06 25.7 5.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Proton_antipo_N PF00662.20 NODE_52326_length_342_cov_6.156352_g44405_i0forward_frame_3 - 0.016 15.3 1.2 0.026 14.6 0.2 1.8 2 0 0 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MFS_3 PF05977.13 NODE_52326_length_342_cov_6.156352_g44405_i0forward_frame_3 - 0.017 13.5 0.4 0.02 13.3 0.4 1.1 1 0 0 1 1 1 0 Transmembrane secretion effector DUF16 PF01519.16 NODE_52323_length_342_cov_27.742671_g44402_i0forward_frame_2 - 0.4 11.2 7.6 0.44 11.1 5.9 1.8 1 1 1 2 2 2 0 Protein of unknown function DUF16 RRS1 PF04939.12 NODE_52322_length_342_cov_41.065147_g44401_i0forward_frame_3 - 9.9e-06 25.5 0.2 9.9e-06 25.5 0.2 2.0 2 0 0 2 2 2 1 Ribosome biogenesis regulatory protein (RRS1) Snurportin1 PF11538.8 NODE_52322_length_342_cov_41.065147_g44401_i0forward_frame_2 - 1.8 8.8 9.6 0.12 12.6 4.4 1.8 2 0 0 2 2 2 0 Snurportin1 VID27_PH PF17747.1 NODE_52320_length_342_cov_48.143322_g44399_i0forward_frame_2 - 0.0087 16.3 0.5 0.01 16.1 0.5 1.1 1 0 0 1 1 1 1 VID27 PH-like domain SID-1_RNA_chan PF13965.6 NODE_52318_length_342_cov_51.042345_g44397_i0reverse_frame_3 - 0.033 12.6 3.3 0.04 12.4 3.3 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Zip PF02535.22 NODE_52318_length_342_cov_51.042345_g44397_i0reverse_frame_3 - 4.4 6.4 4.2 5.2 6.2 4.2 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DPM2 PF07297.12 NODE_52318_length_342_cov_51.042345_g44397_i0forward_frame_3 - 0.042 14.2 1.4 0.073 13.4 1.4 1.3 1 0 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Hep_core_N PF08290.11 NODE_52313_length_342_cov_60.459283_g44392_i0forward_frame_3 - 0.048 13.6 0.6 0.048 13.6 0.6 1.9 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger DDE_Tnp_IS66_C PF13817.6 NODE_52312_length_342_cov_62.967427_g44391_i0reverse_frame_3 - 0.017 15.3 0.0 0.046 13.9 0.0 1.8 2 0 0 2 2 2 0 IS66 C-terminal element STALD PF18185.1 NODE_52308_length_342_cov_70.778502_g44387_i0forward_frame_3 - 0.044 13.1 0.0 0.059 12.7 0.0 1.3 1 0 0 1 1 1 0 Sir2- and TIR-associating SLOG family GvpG PF05120.12 NODE_52307_length_342_cov_72.951140_g44386_i0forward_frame_2 - 0.077 13.0 0.5 0.12 12.5 0.5 1.2 1 0 0 1 1 1 0 Gas vesicle protein G UQ_con PF00179.26 NODE_52306_length_342_cov_74.032573_g44385_i0reverse_frame_3 - 7.3e-05 22.4 0.1 0.00011 21.9 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Svs_4_5_6 PF17381.2 NODE_52304_length_342_cov_76.097720_g44383_i0reverse_frame_3 - 0.17 12.9 5.5 0.22 12.5 5.5 1.1 1 0 0 1 1 1 0 Seminal vesicle secretory proteins 4/5/6 zf-C2HC5 PF06221.13 NODE_52304_length_342_cov_76.097720_g44383_i0forward_frame_2 - 0.044 13.8 0.3 0.068 13.2 0.3 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type CdiA_C_tRNase PF18664.1 NODE_52293_length_342_cov_110.465798_g44372_i0reverse_frame_3 - 0.086 13.0 1.6 0.12 12.6 1.6 1.3 1 0 0 1 1 1 0 CdiA C-terminal tRNase domain DUF2567 PF10821.8 NODE_52290_length_342_cov_117.358306_g44369_i0reverse_frame_3 - 0.092 12.8 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2567) FeoB_C PF07664.12 NODE_52290_length_342_cov_117.358306_g44369_i0reverse_frame_3 - 0.17 11.6 0.3 0.36 10.5 0.3 1.5 1 0 0 1 1 1 0 Ferrous iron transport protein B C terminus Tfb5 PF06331.12 NODE_52289_length_342_cov_152.338762_g44368_i0reverse_frame_2 - 0.0013 18.6 0.0 0.0018 18.2 0.0 1.1 1 0 0 1 1 1 1 Transcription factor TFIIH complex subunit Tfb5 Dynein_light PF01221.18 NODE_52285_length_342_cov_311.302932_g44364_i0forward_frame_2 - 1.4e-24 86.2 0.1 1.8e-24 85.9 0.1 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 Peptidase_M29 PF02073.15 NODE_52283_length_342_cov_322.967427_g44362_i0reverse_frame_3 - 0.081 11.7 0.6 0.085 11.6 0.6 1.0 1 0 0 1 1 1 0 Thermophilic metalloprotease (M29) DUF2868 PF11067.8 NODE_52283_length_342_cov_322.967427_g44362_i0reverse_frame_3 - 0.41 10.1 3.3 0.44 10.0 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) Phage-tail_2 PF09096.10 NODE_52282_length_342_cov_325.719870_g44361_i0reverse_frame_2 - 0.097 12.6 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Baseplate structural protein, domain 2 Rpn9_C PF18261.1 NODE_52281_length_342_cov_361.423453_g42707_i1reverse_frame_3 - 0.1 12.2 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 Rpn9 C-terminal helix CTK3_C PF12350.8 NODE_52279_length_342_cov_2339.306189_g44359_i0forward_frame_3 - 0.11 12.6 3.4 0.18 12.0 3.2 1.4 1 1 0 1 1 1 0 CTD kinase subunit gamma CTK3 C-terminus FANCI_HD1 PF14679.6 NODE_52279_length_342_cov_2339.306189_g44359_i0forward_frame_3 - 0.24 11.4 3.3 0.089 12.8 0.8 1.5 2 0 0 2 2 2 0 FANCI helical domain 1 Ribosomal_L31e PF01198.19 NODE_52279_length_342_cov_2339.306189_g44359_i0forward_frame_2 - 1.3e-28 99.0 3.2 1.6e-28 98.8 3.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e Vsr PF03852.15 NODE_52279_length_342_cov_2339.306189_g44359_i0forward_frame_2 - 0.02 14.7 0.1 0.034 14.0 0.1 1.4 1 0 0 1 1 1 0 DNA mismatch endonuclease Vsr Caenor_Her-1 PF09232.10 ORF99332 - 0.015 15.4 0.3 0.017 15.2 0.3 1.1 1 0 0 1 1 1 0 Caenorhabditis elegans Her-1 Phage_T4_Gp30_7 PF06919.11 ORF99332 - 0.12 12.5 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Phage Gp30.7 protein Cnd1 PF12717.7 ORF97633 - 2.1e-13 50.6 0.0 2.6e-13 50.3 0.0 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 ORF97633 - 1.8e-08 33.4 0.0 2.1e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 Adaptin N terminal region UPF0259 PF06790.11 ORF97633 - 0.023 14.4 0.0 0.027 14.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0259) WAPL PF07814.13 ORF97633 - 0.051 12.4 0.0 0.053 12.3 0.0 1.1 1 0 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin Cnn_1N PF07989.11 ORF97633 - 0.063 13.4 0.2 0.097 12.8 0.2 1.2 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 Kelch_3 PF13415.6 ORF97408 - 5.1e-15 55.3 1.8 2.6e-06 27.6 0.1 3.0 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF97408 - 2e-12 46.8 0.1 3.3e-05 23.8 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF97408 - 2.9e-08 33.6 2.9 0.043 13.8 0.0 3.2 2 1 1 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF97408 - 4.8e-08 33.0 0.4 0.019 15.3 0.0 3.1 2 1 1 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF97408 - 3.9e-05 23.1 0.0 0.0092 15.6 0.0 3.0 3 0 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 ORF97408 - 4.4e-05 23.3 0.1 0.29 11.2 0.0 3.1 3 0 0 3 3 3 2 Kelch motif RAG2 PF03089.14 ORF97408 - 0.011 14.8 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 0 Recombination activating protein 2 Phage_sheath_1N PF17481.2 ORF97374 - 0.00076 19.9 0.6 0.00082 19.8 0.6 1.1 1 0 0 1 1 1 1 Phage tail sheath protein beta-sandwich domain DUF5383 PF17355.2 ORF97374 - 0.0082 16.5 1.3 0.012 16.0 0.7 1.5 1 1 1 2 2 2 1 Family of unknown function (DUF5383) Renin_r PF07850.14 ORF97374 - 0.066 13.8 0.4 0.11 13.1 0.4 1.4 1 0 0 1 1 1 0 Renin receptor-like protein DUF4577 PF15145.6 ORF97374 - 0.099 12.7 0.5 0.15 12.1 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4577) IncFII_repA PF02387.15 ORF97132 - 0.11 11.7 0.7 17 4.5 0.0 2.7 1 1 2 3 3 3 0 IncFII RepA protein family GBP_repeat PF02526.14 ORF9697 - 0.18 11.6 0.0 0.36 10.6 0.0 1.5 1 1 0 1 1 1 0 Glycophorin-binding protein LSM PF01423.22 ORF96824 - 0.00023 20.8 0.0 0.00031 20.4 0.0 1.3 1 0 0 1 1 1 1 LSM domain ATP-synt_8 PF00895.20 ORF96408 - 1.3 9.5 8.0 1.3 9.5 0.3 2.5 2 1 1 3 3 3 0 ATP synthase protein 8 p450 PF00067.22 ORF95905 - 2.8e-20 72.5 0.1 2.9e-20 72.5 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 MORN PF02493.20 ORF95153 - 1.2e-23 81.5 35.3 1.1e-08 34.5 0.4 6.0 6 0 0 6 6 6 5 MORN repeat Phage_lysozyme2 PF18013.1 ORF95153 - 0.11 12.5 4.2 0.6 10.1 0.1 2.4 1 1 1 2 2 2 0 Phage tail lysozyme Asp PF00026.23 ORF94746 - 4.8e-07 29.5 0.1 6.1e-07 29.2 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF94746 - 0.0016 18.7 0.0 0.0026 18.0 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF94746 - 0.006 16.3 0.0 0.0072 16.0 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight S layer protein N terminal FOLN PF09289.10 ORF93830 - 0.94 9.7 3.8 11 6.3 1.6 2.8 2 0 0 2 2 2 0 Follistatin/Osteonectin-like EGF domain Snurportin1 PF11538.8 ORF9303 - 0.036 14.3 0.2 0.088 13.0 0.2 1.7 1 0 0 1 1 1 0 Snurportin1 UPF0444 PF15475.6 ORF9163 - 0.0079 16.4 0.0 0.01 16.1 0.0 1.2 1 0 0 1 1 1 1 Transmembrane protein C12orf23, UPF0444 P4Ha_N PF08336.11 ORF91422 - 0.062 13.3 2.1 0.39 10.7 2.1 2.0 1 1 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region TisB_toxin PF13939.6 ORF91422 - 0.25 11.2 0.8 0.45 10.3 0.8 1.4 1 0 0 1 1 1 0 Toxin TisB, type I toxin-antitoxin system Wzy_C PF04932.15 ORF90193 - 0.028 14.0 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase ECF-ribofla_trS PF07155.12 ORF90193 - 0.072 13.1 2.6 0.25 11.3 2.7 1.6 1 1 1 2 2 2 0 ECF-type riboflavin transporter, S component PA14 PF07691.12 ORF89853 - 3.2e-12 46.5 0.0 3.9e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 ORF89853 - 0.056 13.9 0.0 0.064 13.7 0.0 1.3 1 0 0 1 1 1 0 GLEYA domain Sm_multidrug_ex PF06695.11 ORF89534 - 2.6 8.7 4.0 1.9 9.1 0.8 1.9 2 0 0 2 2 2 0 Putative small multi-drug export protein TMF_TATA_bd PF12325.8 ORF88571 - 0.0049 17.1 4.5 0.0067 16.6 4.5 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding HTH_42 PF06224.12 ORF88567 - 0.0018 17.9 0.3 0.0018 17.9 0.3 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain Phage_rep_org_N PF09681.10 ORF88471 - 0.079 12.9 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) GspL_C PF12693.7 ORF87344 - 0.14 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 GspL periplasmic domain HTH_42 PF06224.12 ORF86513 - 0.0018 17.9 0.3 0.0018 17.9 0.3 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain MeMO_Hyd_G PF02964.16 ORF86279 - 0.24 11.4 0.0 4.9 7.1 0.0 2.0 2 0 0 2 2 2 0 Methane monooxygenase, hydrolase gamma chain DUF1127 PF06568.11 ORF85152 - 0.18 11.5 4.3 0.48 10.2 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1127) BicD PF09730.9 ORF84368 - 0.0028 16.2 1.5 0.0034 15.9 1.5 1.0 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D Cep57_CLD_2 PF14197.6 ORF84368 - 0.04 14.0 6.8 0.098 12.8 1.7 2.1 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 EloA-BP1 PF15870.5 ORF83504 - 0.33 11.2 6.2 0.47 10.7 0.8 2.0 1 1 1 2 2 2 0 ElonginA binding-protein 1 PDZ_1 PF12812.7 ORF81613 - 0.0031 17.5 0.0 0.0056 16.7 0.0 1.4 2 0 0 2 2 2 1 PDZ-like domain Peptidase_M16 PF00675.20 ORF81613 - 0.14 12.1 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Insulinase (Peptidase family M16) P4Ha_N PF08336.11 ORF81433 - 0.062 13.3 2.1 0.39 10.7 2.1 2.0 1 1 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region TisB_toxin PF13939.6 ORF81433 - 0.25 11.2 0.8 0.45 10.3 0.8 1.4 1 0 0 1 1 1 0 Toxin TisB, type I toxin-antitoxin system PBP1_TM PF14812.6 ORF81399 - 0.95 9.9 5.1 0.29 11.5 2.3 1.6 1 1 1 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Abhydrolase_1 PF00561.20 ORF81265 - 0.005 16.5 0.0 0.0053 16.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF81265 - 0.0062 15.8 0.0 0.0073 15.6 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF81265 - 0.086 13.4 0.1 0.094 13.3 0.1 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family PemK_toxin PF02452.17 ORF80955 - 0.043 14.2 0.5 0.1 13.0 0.3 1.8 1 1 0 1 1 1 0 PemK-like, MazF-like toxin of type II toxin-antitoxin system Ank_2 PF12796.7 ORF80545 - 0.0002 21.9 0.1 0.00031 21.3 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF80545 - 0.035 14.7 0.0 0.45 11.2 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeat PDEase_I PF00233.19 ORF79995 - 5.6e-34 117.9 2.1 6.5e-34 117.7 2.1 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase DUF2852 PF11014.8 ORF79995 - 0.017 15.3 0.1 0.018 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) CCDC106 PF15794.5 ORF79472 - 0.0066 16.2 0.8 0.0066 16.2 0.8 1.4 1 1 0 1 1 1 1 Coiled-coil domain-containing protein 106 HALZ PF02183.18 ORF79472 - 0.11 12.7 5.5 0.83 9.9 5.5 2.1 1 1 0 1 1 1 0 Homeobox associated leucine zipper DUF585 PF04522.12 ORF79472 - 0.15 11.6 0.0 0.19 11.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF585) DUF2330 PF10092.9 ORF79472 - 0.15 11.1 0.0 0.17 10.9 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2330) Myc-LZ PF02344.15 ORF79472 - 0.7 10.0 2.9 2.8 8.1 0.4 2.3 2 0 0 2 2 2 0 Myc leucine zipper domain Helicase_C_2 PF13307.6 ORF79280 - 3.1e-13 50.3 0.1 4.2e-13 49.8 0.1 1.2 1 0 0 1 1 1 1 Helicase C-terminal domain Bac_DNA_binding PF00216.21 ORF78318 - 6.7e-13 48.7 2.1 8.8e-13 48.3 2.1 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF78318 - 0.062 13.3 0.6 0.097 12.7 0.6 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal TPP_enzyme_C PF02775.21 ORF78172 - 4.8e-08 32.9 0.0 5.8e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Rep_fac-A_3 PF08661.11 ORF78011 - 5.9e-11 42.6 0.2 6.6e-11 42.5 0.2 1.0 1 0 0 1 1 1 1 Replication factor A protein 3 7TMR-DISMED2 PF07696.11 ORF77581 - 0.07 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 7TMR-DISM extracellular 2 DiS_P_DiS PF06750.13 ORF77135 - 1.8 8.7 4.3 12 6.1 1.0 2.2 2 0 0 2 2 2 0 Bacterial Peptidase A24 N-terminal domain DUF5446 PF17522.2 ORF76214 - 0.014 15.5 2.9 0.024 14.8 2.9 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5446) Uso1_p115_C PF04871.13 ORF76214 - 0.11 12.9 12.0 0.14 12.6 12.0 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region SPT16 PF08644.11 ORF76214 - 0.28 11.3 1.6 0.36 11.0 1.6 1.1 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) OmpH PF03938.14 ORF76214 - 0.34 11.2 10.5 0.42 10.9 10.5 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) NBP1 PF08537.10 ORF76214 - 0.47 9.8 4.4 0.6 9.5 4.4 1.1 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 DUF3987 PF13148.6 ORF76214 - 0.94 8.4 7.9 1.1 8.2 7.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) DUF5321 PF17254.2 ORF76214 - 1.5 8.2 8.5 2 7.9 8.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5321) YqjK PF13997.6 ORF75998 - 3.1e-26 91.4 9.8 4.3e-26 90.9 9.8 1.2 1 0 0 1 1 1 1 YqjK-like protein Fis1_TPR_N PF14852.6 ORF75998 - 0.16 11.7 1.3 7.9 6.3 0.0 2.4 2 0 0 2 2 2 0 Fis1 N-terminal tetratricopeptide repeat Fmp27_WPPW PF10359.9 ORF75676 - 0.0013 17.7 10.7 0.0015 17.5 10.7 1.0 1 0 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain Activator_LAG-3 PF11498.8 ORF75676 - 0.0013 17.8 5.2 0.0014 17.7 5.2 1.1 1 0 0 1 1 1 1 Transcriptional activator LAG-3 TMF_TATA_bd PF12325.8 ORF75676 - 0.0037 17.5 15.9 0.054 13.7 6.1 2.1 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding Sec34 PF04136.15 ORF75676 - 0.004 17.1 8.1 0.009 15.9 6.6 1.9 1 1 1 2 2 2 1 Sec34-like family DUF3450 PF11932.8 ORF75676 - 0.0071 15.7 9.8 0.008 15.5 9.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) HIP1_clath_bdg PF16515.5 ORF75676 - 0.0085 16.7 13.3 0.041 14.5 3.8 2.1 1 1 1 2 2 2 1 Clathrin-binding domain of Huntingtin-interacting protein 1 TACC_C PF05010.14 ORF75676 - 0.013 15.3 15.1 0.017 14.9 15.1 1.1 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal MscS_porin PF12795.7 ORF75676 - 0.016 14.7 12.1 0.029 13.9 12.1 1.4 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain Mod_r PF07200.13 ORF75676 - 0.022 14.9 12.3 0.026 14.6 12.3 1.1 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein V_ATPase_I PF01496.19 ORF75676 - 0.025 12.5 10.1 0.029 12.3 10.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FAD-SLDH PF12318.8 ORF75676 - 0.039 14.0 2.0 1.6 8.8 0.3 2.0 1 1 1 2 2 2 0 Membrane bound FAD containing D-sorbitol dehydrogenase TPR_MLP1_2 PF07926.12 ORF75676 - 0.053 13.6 17.9 0.058 13.5 7.5 2.0 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein HetR_C PF18460.1 ORF75676 - 0.054 13.4 1.8 0.072 13.0 0.6 1.8 1 1 1 2 2 2 0 Heterocyst differentiation regulator C-terminal Hood domain Ssu72 PF04722.13 ORF75676 - 0.058 13.0 4.6 0.11 12.1 4.4 1.6 1 1 1 2 2 2 0 Ssu72-like protein Nnf1 PF03980.14 ORF75676 - 0.071 13.5 1.6 0.071 13.5 1.6 3.0 2 1 0 2 2 2 0 Nnf1 Exonuc_VII_L PF02601.15 ORF75676 - 0.12 11.9 8.1 0.13 11.8 8.1 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prominin PF05478.11 ORF75676 - 0.13 10.2 9.2 0.14 10.0 9.2 1.1 1 0 0 1 1 1 0 Prominin DUF4407 PF14362.6 ORF75676 - 0.13 11.6 10.0 0.16 11.3 10.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YkyA PF10368.9 ORF75676 - 0.15 11.7 18.9 22 4.6 18.9 2.1 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein Vac_Fusion PF02346.16 ORF75676 - 0.15 11.7 6.7 0.73 9.5 0.7 2.6 1 1 2 3 3 3 0 Chordopoxvirus multifunctional envelope protein A27 Vps5 PF09325.10 ORF75676 - 0.16 11.5 14.0 0.2 11.2 1.5 2.0 1 1 1 2 2 2 0 Vps5 C terminal like ZapB PF06005.12 ORF75676 - 0.16 12.5 20.9 1.5 9.3 19.9 2.3 1 1 0 1 1 1 0 Cell division protein ZapB Nup54 PF13874.6 ORF75676 - 0.16 12.1 11.3 0.23 11.6 11.3 1.2 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 H-kinase_dim PF02895.14 ORF75676 - 0.18 12.2 6.2 0.5 10.8 6.2 1.8 1 1 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain DASH_Duo1 PF08651.10 ORF75676 - 0.21 11.4 6.2 0.17 11.7 1.8 2.4 2 1 0 2 2 2 0 DASH complex subunit Duo1 DUF812 PF05667.11 ORF75676 - 0.35 9.7 16.1 0.49 9.2 16.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DivIVA PF05103.13 ORF75676 - 0.36 10.9 14.1 25 5.0 14.1 2.4 1 1 0 1 1 1 0 DivIVA protein BCAS2 PF05700.11 ORF75676 - 0.42 10.3 13.5 0.12 12.1 1.4 2.1 1 1 1 2 2 2 0 Breast carcinoma amplified sequence 2 (BCAS2) DUF641 PF04859.12 ORF75676 - 0.47 10.8 10.6 0.32 11.3 8.7 1.7 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) YscO-like PF16789.5 ORF75676 - 0.51 10.4 18.3 0.66 10.0 18.3 1.2 1 0 0 1 1 1 0 YscO-like protein CENP-H PF05837.12 ORF75676 - 0.53 10.7 14.3 1.3 9.5 14.3 1.7 1 1 0 1 1 1 0 Centromere protein H (CENP-H) Spc7 PF08317.11 ORF75676 - 0.55 9.1 16.1 0.67 8.8 16.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Cep57_MT_bd PF06657.13 ORF75676 - 0.62 10.6 12.8 3.4 8.2 6.2 2.6 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 ATG16 PF08614.11 ORF75676 - 0.63 10.2 16.9 0.087 13.0 7.2 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) HAUS-augmin3 PF14932.6 ORF75676 - 0.73 9.4 11.5 0.94 9.0 11.5 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 APG6_N PF17675.1 ORF75676 - 0.85 10.1 19.6 5 7.6 19.6 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region ZapD PF07072.11 ORF75676 - 0.9 9.2 9.7 2 8.1 2.7 2.0 1 1 1 2 2 2 0 Cell division protein DUF1664 PF07889.12 ORF75676 - 0.91 9.6 9.7 0.53 10.3 4.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) YabA PF06156.13 ORF75676 - 1.1 9.9 15.6 15 6.3 15.6 2.0 1 1 0 1 1 1 0 Initiation control protein YabA IZUMO PF15005.6 ORF75676 - 1.2 9.6 6.8 1.4 9.5 5.1 1.8 1 1 1 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated ArAE_2_N PF10337.9 ORF75676 - 1.4 7.9 3.9 1.6 7.7 3.9 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal BRE1 PF08647.11 ORF75676 - 1.4 9.0 18.1 6.7 6.9 18.1 1.9 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase KLRAQ PF10205.9 ORF75676 - 1.4 9.2 15.8 0.23 11.7 10.4 1.9 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein Fib_alpha PF08702.10 ORF75676 - 1.5 9.0 14.0 2.1 8.5 2.2 2.0 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Rootletin PF15035.6 ORF75676 - 1.7 8.7 15.6 0.73 9.8 11.8 1.9 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion Tho2 PF11262.8 ORF75676 - 1.7 7.7 13.5 0.88 8.7 11.2 1.5 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 TMF_DNA_bd PF12329.8 ORF75676 - 2 8.4 21.6 6 6.9 3.5 2.9 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding SpecificRecomb PF10136.9 ORF75676 - 2.2 6.5 4.6 2.7 6.2 4.6 1.1 1 0 0 1 1 1 0 Site-specific recombinase DUF948 PF06103.11 ORF75676 - 2.4 8.5 6.5 6.3 7.1 3.3 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF3800 PF12686.7 ORF75676 - 2.7 8.7 6.0 4 8.1 6.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3800) DUF2524 PF10732.9 ORF75676 - 2.7 8.3 12.7 7.1 7.0 3.8 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2524) COG2 PF06148.11 ORF75676 - 3.3 7.8 12.9 0.97 9.5 2.1 2.0 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 THOC7 PF05615.13 ORF75676 - 3.8 7.8 18.1 6.1 7.1 4.6 2.0 1 1 1 2 2 2 0 Tho complex subunit 7 ZnuA PF01297.17 ORF75676 - 4.6 6.6 7.6 7.7 5.8 7.6 1.4 1 1 0 1 1 1 0 Zinc-uptake complex component A periplasmic AKNA PF12443.8 ORF75676 - 4.8 7.9 7.1 11 6.7 0.3 2.7 1 1 2 3 3 3 0 AT-hook-containing transcription factor DHR10 PF18595.1 ORF75676 - 5.5 7.1 20.0 10 6.2 9.9 2.4 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain TMPIT PF07851.13 ORF75676 - 6.5 5.9 11.0 12 5.1 11.0 1.5 1 1 0 1 1 1 0 TMPIT-like protein Rotamase PF00639.21 ORF75676 - 6.7 7.8 7.8 5.7 8.0 1.4 2.6 1 1 1 2 2 2 0 PPIC-type PPIASE domain ATG11 PF10377.9 ORF75676 - 6.9 6.7 9.4 13 5.9 2.1 2.3 1 1 1 2 2 2 0 Autophagy-related protein 11 Uso1_p115_C PF04871.13 ORF75676 - 9.2 6.7 17.5 50 4.3 17.5 1.9 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region FNIP PF05725.12 ORF75637 - 8.1e-32 109.1 11.2 2e-14 53.5 0.2 2.9 2 1 1 3 3 3 3 FNIP Repeat Glyco_hydro_65C PF03633.15 ORF75637 - 0.01 15.8 1.0 35 4.4 0.0 4.0 4 0 0 4 4 4 0 Glycosyl hydrolase family 65, C-terminal domain LRR_5 PF13306.6 ORF75637 - 0.02 14.9 0.2 0.026 14.5 0.2 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) LRR_11 PF18831.1 ORF75637 - 7.7 6.2 16.7 32 4.2 0.4 4.5 4 0 0 4 4 4 0 Leucine-rich repeat Scramblase PF03803.15 ORF74994 - 2.2e-10 40.3 0.0 2.6e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 Scramblase BssB_TutG PF18512.1 ORF74994 - 0.075 12.9 1.9 3.9 7.4 0.0 2.5 2 1 1 3 3 3 0 Benzylsuccinate synthase beta subunit DUF2511 PF10709.9 ORF7477 - 7.6e-45 151.1 0.0 9.2e-45 150.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2511) Ribosomal_L37e PF01907.19 ORF74532 - 0.05 13.8 4.2 0.12 12.6 4.2 1.7 1 0 0 1 1 1 0 Ribosomal protein L37e Trimer_CC PF08954.11 ORF73539 - 0.011 15.3 0.3 0.022 14.3 0.3 1.5 1 0 0 1 1 1 0 Trimerisation motif DEAD PF00270.29 ORF73414 - 6.1e-13 48.9 0.2 6.7e-13 48.8 0.2 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 ORF73414 - 0.00042 20.3 0.0 0.00047 20.2 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Phage_CP76 PF06892.11 ORF72716 - 0.34 10.4 4.5 0.63 9.6 2.2 1.9 1 1 1 2 2 2 0 Phage regulatory protein CII (CP76) TES PF08034.11 ORF72624 - 0.52 10.6 9.0 0.51 10.6 6.5 2.0 2 0 0 2 2 2 0 Trematode eggshell synthesis protein SmpA_OmlA PF04355.13 ORF72576 - 4.1e-27 93.8 0.3 5.1e-27 93.5 0.3 1.1 1 0 0 1 1 1 1 SmpA / OmlA family FlaE PF07559.14 ORF72576 - 0.067 13.8 0.1 0.08 13.5 0.1 1.2 1 0 0 1 1 1 0 Flagellar basal body protein FlaE Sulfolobus_pRN PF05584.11 ORF72576 - 0.083 13.0 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein BTB_2 PF02214.22 ORF72373 - 5.8e-21 74.7 0.4 7e-21 74.4 0.4 1.0 1 0 0 1 1 1 1 BTB/POZ domain BTB_3 PF16017.5 ORF72373 - 0.0092 16.1 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 BTB/POZ domain BTB PF00651.31 ORF72373 - 0.017 15.4 0.2 0.021 15.0 0.2 1.2 1 0 0 1 1 1 0 BTB/POZ domain DCR PF14047.6 ORF72213 - 0.012 15.9 0.0 0.023 14.9 0.0 1.6 1 0 0 1 1 1 0 Dppa2/4 conserved region Zn_ribbon_SprT PF17283.2 ORF72213 - 0.085 12.8 1.4 0.21 11.5 1.4 1.7 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Kelch_3 PF13415.6 ORF71093 - 5.1e-15 55.3 1.8 2.6e-06 27.6 0.1 3.0 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF71093 - 2e-12 46.8 0.1 3.3e-05 23.8 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF71093 - 2.9e-08 33.6 2.9 0.043 13.8 0.0 3.2 2 1 1 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF71093 - 4.8e-08 33.0 0.4 0.019 15.3 0.0 3.1 2 1 1 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF71093 - 3.9e-05 23.1 0.0 0.0092 15.6 0.0 3.0 3 0 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 ORF71093 - 4.4e-05 23.3 0.1 0.29 11.2 0.0 3.1 3 0 0 3 3 3 2 Kelch motif RAG2 PF03089.14 ORF71093 - 0.011 14.8 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 0 Recombination activating protein 2 DUF418 PF04235.12 ORF70984 - 0.097 12.6 0.6 0.18 11.7 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF418) ERM PF00769.19 ORF70785 - 0.026 14.3 5.0 0.031 14.1 5.0 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family DUF4618 PF15397.6 ORF70785 - 0.026 13.9 1.0 0.03 13.7 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) COG2 PF06148.11 ORF70785 - 0.028 14.5 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 TetR_C_3 PF08362.11 ORF70785 - 0.091 12.7 1.0 2.3 8.2 0.1 2.0 1 1 1 2 2 2 0 YcdC-like protein, C-terminal region GTA_holin_3TM PF11351.8 ORF70785 - 0.14 12.7 1.3 0.17 12.4 1.1 1.3 1 1 0 1 1 1 0 Holin of 3TMs, for gene-transfer release Caudo_TAP PF02413.17 ORF70785 - 0.28 11.3 5.1 0.36 11.0 4.8 1.4 1 1 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK CCDC-167 PF15188.6 ORF70785 - 0.28 11.5 3.3 0.24 11.8 1.3 1.8 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF2205 PF10224.9 ORF70785 - 0.94 9.5 8.3 4 7.5 2.3 2.5 1 1 1 2 2 2 0 Short coiled-coil protein FUSC PF04632.12 ORF70785 - 1.2 7.6 6.9 1.3 7.5 6.9 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family MatE PF01554.18 ORF70739 - 3.9e-17 62.4 4.3 4.2e-17 62.3 4.3 1.0 1 0 0 1 1 1 1 MatE DUF5474 PF17568.2 ORF69724 - 5.7 7.1 7.8 14 5.8 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5474) S_4TM PF18159.1 ORF68258 - 0.17 11.2 3.2 0.22 10.8 3.2 1.2 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Phage_holin_5_2 PF16079.5 ORF68258 - 0.71 10.2 4.5 0.2 12.0 1.7 1.6 2 0 0 2 2 2 0 Phage holin family Hol44, in holin superfamily V DUF2070 PF09843.9 ORF68258 - 3.4 5.9 17.1 3.7 5.7 17.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF5347 PF17282.2 ORF67121 - 0.11 12.7 0.4 0.43 10.9 0.4 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5347) TisB_toxin PF13939.6 ORF66567 - 0.18 11.6 0.5 0.32 10.8 0.5 1.3 1 0 0 1 1 1 0 Toxin TisB, type I toxin-antitoxin system Striatin PF08232.12 ORF66434 - 0.015 15.9 6.6 0.019 15.6 6.6 1.1 1 0 0 1 1 1 0 Striatin family DUF5549 PF17703.1 ORF63714 - 0.072 12.7 0.2 0.074 12.7 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) SOCS PF12610.8 ORF62127 - 0.042 14.2 0.5 7.6 7.0 0.0 2.3 2 0 0 2 2 2 0 Suppressor of cytokine signalling Ank_5 PF13857.6 ORF60879 - 6.1e-05 23.2 0.0 9.6e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF60879 - 0.00081 19.9 0.0 0.0014 19.1 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF60879 - 0.00094 19.7 0.0 0.0013 19.3 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF60879 - 0.01 16.3 0.0 0.023 15.2 0.0 1.7 1 0 0 1 1 1 0 Ankyrin repeat PTS_IIB PF02302.17 ORF60631 - 1.2e-12 48.3 0.0 1.5e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks207.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks207.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks207.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks207.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4927 PF16279.5 ORF60079 - 0.029 15.4 1.8 0.039 15.0 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4927) Spore_III_AF PF09581.10 ORF60079 - 0.038 14.0 0.7 0.046 13.8 0.7 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) DUF5112 PF17139.4 ORF59389 - 0.19 11.2 0.0 0.21 11.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5112) PPR PF01535.20 ORF59332 - 0.00016 21.7 0.3 0.0012 18.9 0.0 2.6 3 0 0 3 3 3 1 PPR repeat PPR_2 PF13041.6 ORF59332 - 0.0075 16.4 0.0 0.039 14.2 0.0 2.0 2 0 0 2 2 2 1 PPR repeat family Anthrax-tox_M PF09156.10 ORF58545 - 0.01 15.2 0.8 0.01 15.2 0.8 1.1 1 0 0 1 1 1 1 Anthrax toxin lethal factor, middle domain Kelch_3 PF13415.6 ORF58414 - 5.1e-15 55.3 1.8 2.6e-06 27.6 0.1 3.0 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF58414 - 2e-12 46.8 0.1 3.3e-05 23.8 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF58414 - 2.9e-08 33.6 2.9 0.043 13.8 0.0 3.2 2 1 1 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF58414 - 4.8e-08 33.0 0.4 0.019 15.3 0.0 3.1 2 1 1 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF58414 - 3.9e-05 23.1 0.0 0.0092 15.6 0.0 3.0 3 0 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 ORF58414 - 4.4e-05 23.3 0.1 0.29 11.2 0.0 3.1 3 0 0 3 3 3 2 Kelch motif RAG2 PF03089.14 ORF58414 - 0.011 14.8 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 0 Recombination activating protein 2 DUF1283 PF06932.11 ORF58065 - 6.5e-42 141.6 6.1 7.7e-42 141.4 6.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1283) Phasin PF05597.11 ORF58065 - 0.038 14.0 2.0 0.051 13.6 2.0 1.2 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) TMA7 PF09072.10 ORF58065 - 0.67 10.8 2.9 0.57 11.1 1.8 1.4 1 1 0 1 1 1 0 Translation machinery associated TMA7 Abhydrolase_1 PF00561.20 ORF5805 - 3.7e-13 49.7 0.0 4.2e-13 49.5 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF5805 - 7.3e-11 41.8 0.0 7.5e-11 41.7 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF5805 - 5.6e-07 30.4 0.0 6.6e-07 30.2 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 ORF5805 - 1.2e-05 25.0 0.0 1.7e-05 24.5 0.0 1.3 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase DUF915 PF06028.11 ORF5805 - 0.00042 19.7 0.6 0.0025 17.2 0.1 1.9 1 1 1 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) Ser_hydrolase PF06821.13 ORF5805 - 0.027 14.3 0.0 0.031 14.1 0.0 1.1 1 0 0 1 1 1 0 Serine hydrolase Ndr PF03096.14 ORF5805 - 0.031 13.0 0.0 0.031 13.0 0.0 1.1 1 0 0 1 1 1 0 Ndr family Abhydrolase_5 PF12695.7 ORF5805 - 0.063 13.0 0.0 0.075 12.8 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_3 PF07859.13 ORF5805 - 0.069 13.0 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold NblA PF04485.12 ORF5805 - 0.14 12.6 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 Phycobilisome degradation protein nblA DUF3649 PF12365.8 ORF57740 - 0.49 10.2 7.9 1.1 9.0 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3649) Chitin_synth_2 PF03142.15 ORF57516 - 0.0082 14.8 0.9 0.0081 14.8 0.9 1.0 1 0 0 1 1 1 1 Chitin synthase FOXO-TAD PF16676.5 ORF56711 - 0.071 13.5 8.5 6.1 7.3 0.2 3.8 2 2 2 4 4 4 0 Transactivation domain of FOXO protein family Crisp PF08562.10 ORF56711 - 1.9 9.1 19.5 3.9 8.1 7.6 2.8 1 1 2 3 3 3 0 Crisp Paramecium_SA PF01508.16 ORF56711 - 2.1 8.8 16.4 26 5.3 11.9 2.6 1 1 1 2 2 2 0 Paramecium surface antigen domain Tctex-1 PF03645.13 ORF55492 - 0.086 13.1 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 Tctex-1 family DUF4639 PF15479.6 ORF54942 - 0.18 10.7 0.1 0.2 10.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4639) PDEase_I PF00233.19 ORF54384 - 5.6e-34 117.9 2.1 6.5e-34 117.7 2.1 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase DUF2852 PF11014.8 ORF54384 - 0.017 15.3 0.1 0.018 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) DUF485 PF04341.12 ORF53524 - 0.098 12.6 0.2 0.13 12.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 PDH PF02153.17 ORF53212 - 0.025 13.6 0.0 0.032 13.2 0.0 1.1 1 0 0 1 1 1 0 Prephenate dehydrogenase Tau95_N PF17682.1 ORF52848 - 0.093 12.9 5.4 0.11 12.7 4.9 1.4 1 1 0 1 1 1 0 Tau95 Triple barrel domain LANC_like PF05147.13 ORF52848 - 0.22 10.1 2.6 0.27 9.8 2.6 1.1 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein Glyco_transf_34 PF05637.12 ORF52768 - 0.024 14.4 0.0 0.029 14.1 0.0 1.1 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family ABC2_membrane_3 PF12698.7 ORF52671 - 0.05 12.7 2.6 0.052 12.6 2.6 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Baculo_11_kDa PF06143.11 ORF52671 - 0.063 12.9 1.1 0.093 12.3 1.1 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family DUF4715 PF15835.5 ORF52566 - 0.084 12.9 0.0 0.094 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4715) PA14 PF07691.12 ORF52469 - 3.2e-12 46.5 0.0 3.9e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 ORF52469 - 0.055 13.9 0.0 0.064 13.7 0.0 1.3 1 0 0 1 1 1 0 GLEYA domain BCD PF15461.6 ORF51849 - 0.033 13.7 0.7 0.036 13.6 0.7 1.2 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase DUF5347 PF17282.2 ORF51387 - 0.078 13.3 0.7 0.32 11.3 0.7 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5347) APG6_N PF17675.1 ORF49975 - 0.56 10.7 10.1 0.64 10.5 10.1 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF1631 PF07793.11 ORF49906 - 0.28 9.6 7.2 0.32 9.4 7.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) DUF2614 PF11023.8 ORF4657 - 0.046 13.8 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain Metallophos_C PF14008.6 ORF4657 - 0.11 13.4 0.0 0.15 12.9 0.0 1.3 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C Cyt_bd_oxida_II PF02322.15 ORF44848 - 0.009 15.4 0.1 0.01 15.2 0.1 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II HgmA PF04209.13 ORF4456 - 0.093 11.4 0.4 0.11 11.1 0.4 1.1 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase zf_UBZ PF18439.1 ORF43824 - 0.004 16.7 0.2 1.1 8.9 0.0 2.4 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger ADK_lid PF05191.14 ORF43824 - 0.0048 16.8 0.9 0.0076 16.2 0.9 1.3 1 0 0 1 1 1 1 Adenylate kinase, active site lid zf-CHY PF05495.12 ORF43824 - 0.02 15.4 0.2 0.028 14.9 0.2 1.2 1 0 0 1 1 1 0 CHY zinc finger DZR PF12773.7 ORF43824 - 0.027 14.5 1.8 3.7 7.6 0.2 2.2 1 1 1 2 2 2 0 Double zinc ribbon HypA PF01155.19 ORF43824 - 0.033 14.2 0.3 0.055 13.5 0.3 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C2H2_4 PF13894.6 ORF43824 - 0.048 14.5 4.6 7.8 7.6 2.1 2.6 2 0 0 2 2 2 0 C2H2-type zinc finger PHD PF00628.29 ORF43824 - 0.074 13.0 1.1 2.7 8.0 0.3 2.2 2 0 0 2 2 2 0 PHD-finger DUF4379 PF14311.6 ORF43824 - 0.093 13.1 0.8 4.4 7.8 0.0 2.2 2 0 0 2 2 2 0 Probable Zinc-ribbon domain zf-C2H2_6 PF13912.6 ORF43824 - 0.11 12.5 0.5 0.11 12.5 0.5 3.2 4 0 0 4 4 4 0 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF43824 - 0.43 11.1 7.2 0.52 10.9 0.3 3.1 2 1 0 2 2 2 0 Zinc finger, C2H2 type zf-C2HC_2 PF13913.6 ORF43824 - 8.5 6.4 10.0 2.9 7.9 4.2 2.6 2 1 0 2 2 2 0 zinc-finger of a C2HC-type PDH PF02153.17 ORF43104 - 0.025 13.6 0.0 0.032 13.2 0.0 1.1 1 0 0 1 1 1 0 Prephenate dehydrogenase DUF3805 PF12712.7 ORF42863 - 0.06 13.5 0.0 0.072 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3805) Sugar_tr PF00083.24 ORF41562 - 3.3e-18 65.8 0.5 3.9e-18 65.6 0.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter KDZ PF18758.1 ORF40431 - 0.068 12.8 0.0 0.097 12.3 0.0 1.2 1 0 0 1 1 1 0 Kyakuja-Dileera-Zisupton transposase Methyltransf_5 PF01795.19 ORF400 - 5.6e-24 85.2 1.5 9.9e-24 84.4 1.5 1.3 1 1 0 1 1 1 1 MraW methylase family TMF_TATA_bd PF12325.8 ORF39541 - 0.0049 17.1 4.5 0.0067 16.6 4.5 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding FUSC PF04632.12 ORF38578 - 0.06 11.9 2.0 0.064 11.8 2.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Macoilin PF09726.9 ORF38471 - 0.015 13.9 10.8 0.015 13.9 10.8 1.0 1 0 0 1 1 1 0 Macoilin family BET PF17035.5 ORF37826 - 6.5e-09 35.8 8.9 1.1e-08 35.1 8.9 1.4 1 0 0 1 1 1 1 Bromodomain extra-terminal - transcription regulation RabGAP-TBC PF00566.18 ORF37825 - 5.7e-29 101.3 1.3 6e-29 101.2 1.3 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DegS PF05384.11 ORF37825 - 0.048 13.1 0.1 0.066 12.7 0.1 1.1 1 0 0 1 1 1 0 Sensor protein DegS MORN PF02493.20 ORF37512 - 5.8e-21 73.1 21.7 3.6e-07 29.7 0.7 5.2 5 0 0 5 5 5 5 MORN repeat DUF3048_C PF17479.2 ORF37512 - 0.032 14.6 4.0 1.4 9.3 0.2 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain DUF2808 PF10989.8 ORF37340 - 0.033 14.2 0.3 0.051 13.5 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2808) PKcGMP_CC PF16808.5 ORF35433 - 0.0044 16.8 1.9 0.008 16.0 0.2 2.4 2 1 0 2 2 2 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Cep57_MT_bd PF06657.13 ORF35433 - 0.0046 17.4 1.6 0.0046 17.4 1.6 2.1 1 1 1 2 2 2 1 Centrosome microtubule-binding domain of Cep57 Wzz PF02706.15 ORF35433 - 0.012 15.9 0.9 0.2 12.0 0.0 2.1 1 1 1 2 2 2 0 Chain length determinant protein DUF3386 PF11866.8 ORF35433 - 0.018 14.5 0.4 0.022 14.3 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3386) GM_CSF PF01109.17 ORF35433 - 0.021 15.0 1.1 0.024 14.8 1.1 1.2 1 0 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor GAS PF13851.6 ORF35433 - 0.042 13.2 15.0 0.053 12.9 15.0 1.1 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding DUF641 PF04859.12 ORF35433 - 0.57 10.5 7.9 0.11 12.8 3.9 1.8 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF3450 PF11932.8 ORF35433 - 0.95 8.7 9.9 0.36 10.1 2.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 ORF35433 - 5.2 6.5 9.3 5.6 6.4 9.3 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit THB PF18362.1 ORF34777 - 0.057 13.0 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 Tri-helix bundle domain RsgA_GTPase PF03193.16 ORF34777 - 0.18 11.7 0.0 0.24 11.3 0.0 1.3 1 1 0 1 1 1 0 RsgA GTPase Astacin PF01400.24 ORF34312 - 1.7e-17 63.7 0.0 2.1e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Astacin (Peptidase family M12A) Peptidase_M10 PF00413.24 ORF34312 - 0.018 14.9 0.1 0.027 14.3 0.1 1.3 1 0 0 1 1 1 0 Matrixin ABC_tran PF00005.27 ORF34064 - 5.5e-08 33.4 0.0 8.8e-08 32.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter RuvC_1 PF18516.1 ORF34064 - 0.024 13.8 0.4 0.055 12.6 0.4 1.7 1 1 1 2 2 2 0 RuvC nuclease domain SMC_N PF02463.19 ORF34064 - 0.052 13.0 0.1 0.065 12.7 0.1 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Epimerase PF01370.21 ORF34002 - 2.4e-10 40.3 0.0 2.7e-10 40.1 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF34002 - 1.3e-08 34.2 0.0 1.5e-08 34.0 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 ORF34002 - 2.7e-08 33.9 0.0 3.4e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF34002 - 1.1e-07 31.6 0.0 1.2e-07 31.5 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NmrA PF05368.13 ORF34002 - 1e-06 28.5 0.0 1.3e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family KR PF08659.10 ORF34002 - 3.1e-05 23.9 0.0 5e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF34002 - 0.00012 22.3 0.0 0.00014 22.1 0.0 1.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Polysacc_synt_2 PF02719.15 ORF34002 - 0.00029 20.1 0.0 0.00029 20.1 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF34002 - 0.0003 20.0 0.0 0.00053 19.2 0.0 1.5 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.25 ORF34002 - 0.13 11.7 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 short chain dehydrogenase HEAT PF02985.22 ORF32194 - 1.9 8.9 5.2 2.4 8.6 0.0 3.1 3 1 0 3 3 3 0 HEAT repeat Ca_hom_mod PF14798.6 ORF31524 - 0.016 14.3 0.0 0.017 14.2 0.0 1.1 1 0 0 1 1 1 0 Calcium homeostasis modulator ATP-synt_B PF00430.18 ORF31524 - 0.034 14.2 3.1 0.96 9.5 0.3 2.2 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) DUF4446 PF14584.6 ORF31524 - 0.042 13.8 1.3 0.045 13.7 0.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) Protocadherin PF08374.11 ORF31524 - 0.065 13.2 0.1 0.07 13.1 0.1 1.1 1 0 0 1 1 1 0 Protocadherin DUF2207 PF09972.9 ORF31524 - 0.078 11.7 0.0 0.091 11.5 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FLILHELTA PF10306.9 ORF31524 - 0.1 13.0 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Hypothetical protein FLILHELTA DUF4199 PF13858.6 ORF31524 - 0.51 10.7 4.3 2.7 8.3 0.0 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF4199) Pox_int_trans PF05718.12 ORF30894 - 0.12 11.0 0.1 0.15 10.7 0.1 1.0 1 0 0 1 1 1 0 Poxvirus intermediate transcription factor BCD PF15461.6 ORF30780 - 0.033 13.7 0.7 0.036 13.6 0.7 1.2 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase DUF4950 PF16308.5 ORF30723 - 0.023 14.7 1.8 0.025 14.6 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4950) Mitofilin PF09731.9 ORF30723 - 0.32 9.8 9.3 0.37 9.6 9.3 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein SurA_N_2 PF13623.6 ORF30723 - 0.9 9.4 8.2 8.1 6.3 8.2 2.1 1 1 0 1 1 1 0 SurA N-terminal domain Kelch_3 PF13415.6 ORF30588 - 5.1e-15 55.3 1.8 2.6e-06 27.6 0.1 3.0 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF30588 - 2e-12 46.8 0.1 3.3e-05 23.8 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF30588 - 2.9e-08 33.6 2.9 0.043 13.8 0.0 3.2 2 1 1 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF30588 - 4.8e-08 33.0 0.4 0.019 15.3 0.0 3.1 2 1 1 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF30588 - 3.9e-05 23.1 0.0 0.0092 15.6 0.0 3.0 3 0 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 ORF30588 - 4.4e-05 23.3 0.1 0.29 11.2 0.0 3.1 3 0 0 3 3 3 2 Kelch motif RAG2 PF03089.14 ORF30588 - 0.011 14.8 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 0 Recombination activating protein 2 Baculo_11_kDa PF06143.11 ORF3012 - 0.06 12.9 1.1 0.093 12.3 1.1 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family EF-hand_1 PF00036.32 ORF2993 - 1.3e-20 71.3 5.0 5.3e-07 28.7 0.1 3.3 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF2993 - 2.4e-18 66.4 2.4 3.5e-09 37.0 0.2 2.3 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF2993 - 3.8e-18 63.8 5.3 1.2e-07 31.1 0.2 3.4 3 0 0 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 ORF2993 - 1.2e-15 56.2 4.5 1.3e-06 27.6 0.3 3.5 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF2993 - 6.4e-12 45.1 1.8 0.0036 17.1 0.0 3.3 1 1 2 3 3 3 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF2993 - 1.9e-07 31.4 0.4 1.7e-05 25.1 0.0 2.0 1 1 1 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region DUF1398 PF07166.11 ORF2993 - 0.00026 21.0 0.1 0.00037 20.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1398) EF-hand_9 PF14658.6 ORF2993 - 0.0043 17.3 0.1 2.2 8.7 0.0 2.7 2 1 0 2 2 2 2 EF-hand domain Caleosin PF05042.13 ORF2993 - 0.0047 16.9 0.8 2.8 7.8 0.1 2.6 1 1 2 3 3 3 2 Caleosin related protein SWIRM PF04433.17 ORF2993 - 0.038 14.3 0.4 3 8.3 0.1 2.2 1 1 1 2 2 2 0 SWIRM domain EF-hand_10 PF14788.6 ORF2993 - 0.047 13.6 1.2 10 6.0 0.1 3.1 3 1 1 4 4 4 0 EF hand La PF05383.17 ORF2993 - 0.049 13.7 0.3 0.15 12.1 0.1 2.1 2 1 0 2 2 2 0 La domain DUF4552 PF15089.6 ORF2993 - 0.062 12.4 2.4 0.068 12.2 2.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) Ion_trans PF00520.31 ORF28214 - 0.017 14.3 0.7 0.026 13.8 0.7 1.3 1 0 0 1 1 1 0 Ion transport protein PKD_channel PF08016.12 ORF28214 - 0.027 13.1 2.3 0.035 12.8 2.3 1.2 1 0 0 1 1 1 0 Polycystin cation channel Ac76 PF05814.11 ORF28214 - 2.3 8.3 6.9 0.25 11.4 2.3 1.7 1 1 1 2 2 2 0 Orf76 (Ac76) Bac_DNA_binding PF00216.21 ORF28093 - 6.7e-13 48.7 2.1 8.8e-13 48.3 2.1 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF28093 - 0.062 13.3 0.6 0.097 12.7 0.6 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal HK_sensor PF16750.5 ORF27447 - 0.11 12.7 0.2 0.2 12.0 0.2 1.4 1 1 0 1 1 1 0 Sensor domain of 2-component histidine kinase DUF883 PF05957.13 ORF26152 - 6.5e-25 87.6 1.0 7.8e-25 87.3 1.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) Activator-TraM PF11657.8 ORF26152 - 0.0016 18.3 0.1 0.0018 18.1 0.1 1.2 1 0 0 1 1 1 1 Transcriptional activator TraM ApoLp-III PF07464.11 ORF26152 - 0.027 14.6 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DUF305 PF03713.13 ORF26152 - 0.036 14.2 0.3 0.042 14.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF305) YtxH PF12732.7 ORF26152 - 0.3 11.6 5.5 0.65 10.6 0.7 2.8 2 1 1 3 3 3 0 YtxH-like protein MAGI_u5 PF16666.5 ORF26133 - 0.11 12.7 0.9 0.13 12.4 0.9 1.1 1 0 0 1 1 1 0 Unstructured region on MAGI RNA_pol_Rpb4 PF03874.16 ORF25936 - 6.6e-09 36.2 1.0 8e-09 35.9 1.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 TES PF08034.11 ORF25606 - 0.52 10.6 9.0 0.51 10.6 6.5 2.0 2 0 0 2 2 2 0 Trematode eggshell synthesis protein WD40 PF00400.32 ORF25492 - 0.0012 19.6 0.1 0.035 15.0 0.1 2.7 3 0 0 3 3 3 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF25492 - 0.0083 16.4 0.0 0.047 14.0 0.0 2.1 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Cytochrom_D1 PF02239.16 ORF25492 - 0.092 11.3 0.0 0.1 11.1 0.0 1.1 1 0 0 1 1 1 0 Cytochrome D1 heme domain SDA1 PF05285.12 ORF25464 - 0.62 9.4 46.8 0.67 9.3 46.8 1.1 1 0 0 1 1 1 0 SDA1 DNA_pol_phi PF04931.13 ORF25464 - 1 7.3 51.2 1.2 7.1 51.2 1.0 1 0 0 1 1 1 0 DNA polymerase phi DUF5525 PF17663.1 ORF25464 - 1.3 7.0 6.9 1.4 6.9 6.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) CobT PF06213.12 ORF25464 - 8.5 5.7 36.7 12 5.2 36.7 1.3 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Nop25 PF09805.9 ORF25464 - 9.4 6.7 32.0 13 6.2 32.0 1.3 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) Nudix_hydro PF18290.1 ORF25019 - 0.051 13.6 0.0 0.07 13.1 0.0 1.4 1 0 0 1 1 1 0 Nudix hydrolase domain VSG_B PF13206.6 ORF24645 - 0.11 11.8 0.1 0.11 11.7 0.1 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain DnaJ PF00226.31 ORF24264 - 0.0093 16.1 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain Pho88 PF10032.9 ORF23401 - 1.7e-25 89.3 0.0 1.8e-25 89.3 0.0 1.0 1 0 0 1 1 1 1 Phosphate transport (Pho88) Ribosomal_S30AE PF02482.19 ORF22978 - 7.4e-22 77.9 0.0 8.9e-22 77.7 0.0 1.1 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein DUF1690 PF07956.11 ORF22978 - 0.02 15.3 0.1 0.032 14.6 0.1 1.3 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) TisB_toxin PF13939.6 ORF22547 - 0.18 11.6 0.5 0.32 10.8 0.5 1.3 1 0 0 1 1 1 0 Toxin TisB, type I toxin-antitoxin system GGACT PF06094.12 ORF19487 - 6.3e-25 88.1 0.1 7.1e-25 88.0 0.1 1.0 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like DUF677 PF05055.12 ORF18989 - 0.0057 15.6 0.8 0.0087 15.0 0.8 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF677) Slp PF03843.13 ORF18920 - 0.012 15.0 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein Slp family PRR18 PF15671.5 ORF18581 - 0.68 9.8 9.0 0.44 10.4 7.2 1.5 1 1 1 2 2 2 0 Proline-rich protein family 18 FOLN PF09289.10 ORF18010 - 0.94 9.7 3.8 11 6.3 1.6 2.8 2 0 0 2 2 2 0 Follistatin/Osteonectin-like EGF domain NACHT PF05729.12 ORF17197 - 0.091 12.7 0.0 0.095 12.6 0.0 1.1 1 0 0 1 1 1 0 NACHT domain Scramblase PF03803.15 ORF1540 - 2.2e-10 40.3 0.0 2.6e-10 40.0 0.0 1.1 1 0 0 1 1 1 1 Scramblase BssB_TutG PF18512.1 ORF1540 - 0.075 12.9 1.9 3.9 7.4 0.0 2.5 2 1 1 3 3 3 0 Benzylsuccinate synthase beta subunit FlxA PF14282.6 ORF15351 - 1.5e-15 57.0 27.6 1.9e-15 56.7 27.6 1.1 1 0 0 1 1 1 1 FlxA-like protein Nse5 PF08691.10 ORF15351 - 0.00028 19.7 2.8 0.0003 19.6 2.8 1.0 1 0 0 1 1 1 1 DNA repair proteins Nse5 and Nse6 DHR10 PF18595.1 ORF15351 - 0.00063 19.8 11.7 0.00074 19.6 11.7 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain Med21 PF11221.8 ORF15351 - 0.0041 17.4 11.8 0.005 17.1 11.8 1.1 1 0 0 1 1 1 1 Subunit 21 of Mediator complex AAA_13 PF13166.6 ORF15351 - 0.032 12.9 6.2 0.038 12.6 6.2 1.0 1 0 0 1 1 1 0 AAA domain Med10 PF09748.9 ORF15351 - 0.048 13.6 4.8 0.062 13.3 4.8 1.2 1 0 0 1 1 1 0 Transcription factor subunit Med10 of Mediator complex PCRF PF03462.18 ORF15351 - 0.07 13.0 4.4 0.077 12.9 4.4 1.1 1 0 0 1 1 1 0 PCRF domain DUF724 PF05266.14 ORF15351 - 0.085 12.7 4.8 0.1 12.4 4.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) FapA PF03961.13 ORF15351 - 0.1 11.2 6.6 0.11 11.1 6.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Allexi_40kDa PF05549.11 ORF15351 - 0.15 11.6 5.4 0.16 11.4 5.4 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein GTP-bdg_M PF16360.5 ORF15351 - 0.25 11.9 7.2 0.91 10.2 7.2 1.9 1 1 0 1 1 1 0 GTP-binding GTPase Middle Region FAM76 PF16046.5 ORF15351 - 0.42 9.9 6.7 0.49 9.7 6.7 1.0 1 0 0 1 1 1 0 FAM76 protein Med9 PF07544.13 ORF15351 - 0.48 10.5 12.0 0.13 12.4 8.8 1.6 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Phage_GPO PF05929.11 ORF15351 - 0.56 9.8 7.8 0.68 9.5 7.8 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase MscS_porin PF12795.7 ORF15351 - 0.61 9.6 25.2 0.44 10.0 15.9 2.0 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain FUSC PF04632.12 ORF15351 - 0.67 8.4 2.8 0.76 8.2 2.8 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family SlyX PF04102.12 ORF15351 - 0.7 10.6 14.4 2.2 9.0 1.0 2.2 1 1 1 2 2 2 0 SlyX FemAB PF02388.16 ORF15351 - 0.72 8.7 6.2 0.82 8.5 6.2 1.0 1 0 0 1 1 1 0 FemAB family TMPIT PF07851.13 ORF15351 - 1.2 8.3 6.1 1.5 8.0 6.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein MbeD_MobD PF04899.12 ORF15351 - 1.6 8.9 13.1 1.7 8.8 0.3 2.2 1 1 1 2 2 2 0 MbeD/MobD like MerR-DNA-bind PF09278.11 ORF15351 - 2.3 8.8 12.3 2.2 8.9 7.9 2.2 1 1 1 2 2 2 0 MerR, DNA binding DDHD PF02862.17 ORF15351 - 3.4 7.8 5.5 3.5 7.7 5.5 1.0 1 0 0 1 1 1 0 DDHD domain DUF2802 PF10975.8 ORF15351 - 4.2 7.6 13.6 4.5 7.5 1.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2802) DUF5320 PF17253.2 ORF15351 - 4.5 8.4 6.3 4.6 8.4 3.3 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5320) Spc24 PF08286.11 ORF15351 - 6.2 7.1 11.0 11 6.4 7.9 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 YabA PF06156.13 ORF15351 - 8.5 7.1 8.5 30 5.3 8.3 1.8 1 1 0 1 1 1 0 Initiation control protein YabA FixS PF03597.15 ORF15085 - 1.6 8.5 4.5 0.5 10.1 1.1 1.9 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type BRCC36_C PF18110.1 ORF14489 - 0.11 12.7 1.2 13 6.0 0.2 2.1 2 0 0 2 2 2 0 BRCC36 C-terminal helical domain UMPH-1 PF05822.12 ORF13126 - 4e-21 75.6 0.5 4.6e-21 75.5 0.5 1.0 1 0 0 1 1 1 1 Pyrimidine 5'-nucleotidase (UMPH-1) DUF4552 PF15089.6 ORF13126 - 0.034 13.2 0.2 0.037 13.1 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) Ras PF00071.22 ORF12257 - 9.8e-30 103.3 0.1 1.1e-29 103.1 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF12257 - 4.2e-19 68.9 0.1 4.9e-19 68.7 0.1 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF12257 - 1.8e-06 27.6 0.0 2.1e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF12257 - 0.012 15.2 0.0 0.013 15.1 0.0 1.0 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF12257 - 0.093 12.1 0.0 0.096 12.0 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Kinesin PF00225.23 ORF12064 - 3.6e-25 88.6 0.0 4.1e-25 88.4 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Tiam_CC_Ex PF18385.1 ORF12064 - 0.12 12.8 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 T-lymphoma invasion and metastasis CC-Ex domain Rrp44_CSD1 PF17216.3 ORF12064 - 0.18 11.5 0.0 0.23 11.2 0.0 1.1 1 0 0 1 1 1 0 Rrp44-like cold shock domain Dimerisation PF08100.11 ORF112103 - 0.12 12.4 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 Dimerisation domain B56 PF01603.20 ORF111354 - 1.3e-06 27.6 0.2 1.8e-06 27.2 0.2 1.2 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) Skp1_POZ PF03931.15 ORF110734 - 6.2e-14 51.9 0.0 1.5e-13 50.7 0.0 1.6 2 0 0 2 2 2 1 Skp1 family, tetramerisation domain BTB PF00651.31 ORF110734 - 0.00055 20.1 0.1 0.00079 19.6 0.1 1.3 1 1 0 1 1 1 1 BTB/POZ domain SCP1201-deam PF14428.6 ORF11006 - 0.077 12.9 0.3 0.092 12.6 0.3 1.2 1 0 0 1 1 1 0 SCP1.201-like deaminase Annexin_like PF18411.1 ORF109528 - 0.045 14.0 0.3 0.071 13.4 0.2 1.4 1 1 0 1 1 1 0 Annexin-like domain Rad54_N PF08658.10 ORF109528 - 0.22 11.7 5.2 0.058 13.6 2.7 1.3 2 0 0 2 2 2 0 Rad54 N terminal Peptidase_C31 PF05410.13 ORF109392 - 0.022 14.8 0.6 0.032 14.3 0.6 1.3 1 0 0 1 1 1 0 Porcine arterivirus-type cysteine proteinase alpha DUF2975 PF11188.8 ORF107784 - 0.18 11.7 0.1 0.51 10.2 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2975) Rota_VP2 PF05087.12 ORF107590 - 0.62 8.1 5.5 0.66 8.0 5.5 1.0 1 0 0 1 1 1 0 Rotavirus VP2 protein SurA_N PF09312.11 ORF10739 - 0.022 14.8 1.8 0.031 14.3 1.2 1.5 1 1 0 1 1 1 0 SurA N-terminal domain LSDAT_euk PF18139.1 ORF107153 - 0.00013 21.4 2.5 0.00014 21.3 2.1 1.3 1 1 0 1 1 1 1 SLOG in TRPM TPH PF13868.6 ORF107153 - 0.0033 16.0 37.1 0.066 11.7 18.2 2.0 2 0 0 2 2 2 2 Trichohyalin-plectin-homology domain DUF2229 PF09989.9 ORF107153 - 2.3 7.8 7.0 2.5 7.7 7.0 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) CBM_1 PF00734.18 ORF106658 - 5.2 7.1 7.3 0.49 10.4 1.2 2.2 2 0 0 2 2 2 0 Fungal cellulose binding domain FANCD2OS PF15124.6 ORF106135 - 0.19 11.9 0.8 0.33 11.2 0.8 1.4 1 0 0 1 1 1 0 FANCD2 opposite strand protein Cyt_bd_oxida_II PF02322.15 ORF104700 - 0.009 15.4 0.1 0.01 15.2 0.1 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II YqfD PF06898.11 ORF104608 - 0.025 13.4 0.5 0.032 13.1 0.5 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD PP_kinase_C PF13090.6 ORF104497 - 0.018 14.5 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain 2 TT_ORF2 PF02957.15 ORF104374 - 0.87 10.5 3.7 1.3 10.0 3.7 1.3 1 0 0 1 1 1 0 TT viral ORF2 DUF3805 PF12712.7 ORF104073 - 0.06 13.5 0.0 0.072 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3805) MeMO_Hyd_G PF02964.16 ORF10351 - 0.24 11.4 0.0 4.9 7.1 0.0 2.0 2 0 0 2 2 2 0 Methane monooxygenase, hydrolase gamma chain PBP1_TM PF14812.6 ORF102716 - 0.95 9.9 5.1 0.29 11.5 2.3 1.6 1 1 1 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal NQRA PF05896.11 ORF102590 - 0.16 11.4 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DUF3716 PF12511.8 ORF101991 - 0.022 14.8 1.7 0.022 14.8 1.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3716) Kelch_5 PF13854.6 ORF100826 - 0.0013 18.7 0.0 0.0022 18.0 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 ORF100826 - 0.0061 16.8 0.1 0.027 14.7 0.0 1.9 2 0 0 2 2 2 1 Kelch motif Kelch_2 PF07646.15 ORF100826 - 0.055 13.5 0.2 1.3 9.1 0.0 2.2 2 0 0 2 2 2 0 Kelch motif Kelch_3 PF13415.6 ORF100826 - 0.49 10.7 1.7 13 6.2 0.1 2.6 3 0 0 3 3 3 0 Galactose oxidase, central domain Prefoldin PF02996.17 ORF100710 - 0.019 14.9 12.7 0.14 12.0 12.7 1.9 1 1 0 1 1 1 0 Prefoldin subunit ZapB PF06005.12 ORF100710 - 0.33 11.4 20.3 0.22 12.0 6.0 2.2 1 1 1 2 2 2 0 Cell division protein ZapB Prominin PF05478.11 ORF100710 - 0.61 8.0 7.5 0.67 7.8 7.5 1.1 1 0 0 1 1 1 0 Prominin YabA PF06156.13 ORF100710 - 2.8 8.7 15.4 0.099 13.3 5.2 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF3347 PF11827.8 ORF100710 - 8.9 6.5 9.7 7 6.8 5.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) ChpXY PF10216.9 NODE_53124_length_334_cov_1.284281_g45199_i0reverse_frame_1 - 0.037 13.2 0.4 0.041 13.0 0.4 1.0 1 0 0 1 1 1 0 CO2 hydration protein (ChpXY) Tubulin PF00091.25 NODE_53124_length_334_cov_1.284281_g45199_i0forward_frame_1 - 2.7e-39 135.4 0.0 2.9e-39 135.3 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 NODE_53124_length_334_cov_1.284281_g45199_i0forward_frame_1 - 0.0042 16.8 0.0 0.0042 16.8 0.0 1.1 1 0 0 1 1 1 1 Tubulin domain Tubulin_2 PF13809.6 NODE_53124_length_334_cov_1.284281_g45199_i0forward_frame_1 - 0.013 14.7 0.0 0.015 14.5 0.0 1.1 1 0 0 1 1 1 0 Tubulin like HupE_UreJ_2 PF13795.6 NODE_53121_length_334_cov_1.357860_g45196_i0reverse_frame_1 - 0.0039 16.9 0.3 0.0046 16.6 0.3 1.0 1 0 0 1 1 1 1 HupE / UreJ protein DUF2457 PF10446.9 NODE_53120_length_334_cov_1.361204_g45195_i0reverse_frame_1 - 0.98 8.5 5.1 1.1 8.3 5.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) NTP_transferase PF00483.23 NODE_53117_length_334_cov_1.458194_g45192_i0reverse_frame_1 - 6.2e-20 71.8 0.0 6.8e-20 71.7 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase DUF5508 PF17621.2 NODE_53114_length_334_cov_1.551839_g45189_i0forward_frame_1 - 0.028 13.6 0.3 0.033 13.3 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5508) DUF3496 PF12001.8 NODE_53113_length_334_cov_1.645485_g45188_i0reverse_frame_1 - 0.082 13.3 0.2 0.11 12.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) DUF1765 PF08578.10 NODE_53113_length_334_cov_1.645485_g45188_i0forward_frame_1 - 0.085 13.3 3.4 0.094 13.2 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1765) DUF3785 PF12653.7 NODE_53110_length_334_cov_1.779264_g45185_i0forward_frame_1 - 0.036 14.2 3.5 0.029 14.5 2.2 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3785) zf-RING_11 PF17123.5 NODE_53110_length_334_cov_1.779264_g45185_i0forward_frame_1 - 0.055 13.2 0.3 5.9 6.7 0.1 2.6 2 0 0 2 2 2 0 RING-like zinc finger Pertactin PF03212.14 NODE_53105_length_334_cov_2.013378_g45180_i0reverse_frame_1 - 1.6e-06 28.1 0.1 2e-06 27.8 0.1 1.1 1 0 0 1 1 1 1 Pertactin Biopterin_H PF00351.21 NODE_53104_length_334_cov_2.046823_g45179_i0reverse_frame_1 - 2.6e-50 171.3 0.0 2.9e-50 171.2 0.0 1.0 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase GAGA PF09237.11 NODE_53100_length_334_cov_2.237458_g45175_i0forward_frame_1 - 0.28 11.0 4.1 0.16 11.8 0.9 2.0 1 1 1 2 2 2 0 GAGA factor Clc-like PF07062.12 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_1 - 0.0018 17.8 6.5 0.0021 17.6 6.5 1.0 1 0 0 1 1 1 1 Clc-like Anoctamin PF04547.12 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_1 - 0.0025 16.8 6.7 0.0029 16.5 6.7 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel TMEM154 PF15102.6 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_1 - 0.0043 17.0 1.8 0.0043 17.0 1.8 2.1 1 1 1 2 2 2 1 TMEM154 protein family DUF2207 PF09972.9 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_1 - 0.0056 15.5 8.0 0.0064 15.3 8.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) SUR7 PF06687.12 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_1 - 0.013 15.1 9.2 0.015 14.9 9.2 1.1 1 0 0 1 1 1 0 SUR7/PalI family TraG_N PF07916.11 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_1 - 0.031 13.2 5.9 0.031 13.1 5.9 1.1 1 0 0 1 1 1 0 TraG-like protein, N-terminal region PGM_PMM_III PF02880.16 NODE_53084_length_334_cov_2.819398_g45159_i0reverse_frame_1 - 3.8e-16 59.3 0.2 5.1e-16 58.9 0.2 1.2 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 NODE_53084_length_334_cov_2.819398_g45159_i0reverse_frame_1 - 3.8e-09 36.6 0.3 9e-09 35.4 0.2 1.7 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DivIC PF04977.15 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_1 - 0.0016 18.2 5.9 0.0023 17.7 0.7 2.1 2 0 0 2 2 2 1 Septum formation initiator GP57 PF17594.2 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_1 - 0.082 12.7 0.8 0.66 9.8 0.1 2.2 1 1 1 2 2 2 0 Phage Tail fiber assembly helper gene product 57 NRBF2 PF08961.10 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_1 - 0.36 10.4 5.8 1.3 8.6 5.7 1.8 1 1 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator YabA PF06156.13 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_1 - 1.2 9.8 9.6 3.3 8.4 2.0 2.0 1 1 1 2 2 2 0 Initiation control protein YabA BBL5 PF07289.11 NODE_53072_length_334_cov_40.163880_g45147_i0reverse_frame_1 - 0.031 13.3 0.1 0.033 13.2 0.1 1.1 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein Peptidase_C54 PF03416.19 NODE_53071_length_334_cov_47.224080_g45146_i0reverse_frame_1 - 5.9e-09 35.7 0.1 8.3e-09 35.3 0.1 1.2 1 0 0 1 1 1 1 Peptidase family C54 Catalase-rel PF06628.12 NODE_53070_length_334_cov_50.177258_g45145_i0forward_frame_1 - 0.031 14.5 0.2 0.35 11.1 0.2 2.1 2 0 0 2 2 2 0 Catalase-related immune-responsive CortBP2 PF09727.9 NODE_53070_length_334_cov_50.177258_g45145_i0forward_frame_1 - 0.054 13.4 2.1 0.067 13.1 2.1 1.1 1 0 0 1 1 1 0 Cortactin-binding protein-2 OGG_N PF07934.12 NODE_53069_length_334_cov_51.474916_g45144_i0reverse_frame_1 - 0.066 13.3 0.1 0.078 13.1 0.1 1.1 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain FAM184 PF15665.5 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.00068 19.5 12.1 0.00068 19.5 12.1 1.3 1 1 0 1 1 1 1 Family with sequence similarity 184, A and B Filament PF00038.21 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.00077 19.1 11.6 0.00091 18.9 11.6 1.1 1 0 0 1 1 1 1 Intermediate filament protein CALCOCO1 PF07888.11 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.0048 15.8 8.8 0.0055 15.6 8.8 1.0 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like Lysozyme_like PF13702.6 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.013 15.2 6.6 0.59 9.8 0.7 2.1 1 1 1 2 2 2 0 Lysozyme-like Apolipoprotein PF01442.18 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.015 15.2 5.1 0.053 13.4 5.1 1.7 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain TPR_MLP1_2 PF07926.12 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.017 15.2 13.7 0.025 14.6 13.7 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Syntaxin-6_N PF09177.11 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.018 15.6 7.2 0.031 14.8 7.2 1.4 1 1 0 1 1 1 0 Syntaxin 6, N-terminal YtxH PF12732.7 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.021 15.4 3.7 0.021 15.4 3.7 2.2 1 1 1 2 2 2 0 YtxH-like protein DUF848 PF05852.11 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.03 14.4 6.0 0.038 14.1 6.0 1.3 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Phage_Mu_Gam PF07352.12 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.034 14.0 14.0 0.24 11.3 5.6 2.1 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein AcylCoA_dehyd_C PF12186.8 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.036 14.2 1.3 0.036 14.2 1.3 2.0 1 1 1 2 2 2 0 Acyl-CoA dehydrogenase C terminal Senescence PF06911.12 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.04 14.2 0.5 0.078 13.3 0.5 1.6 1 1 0 1 1 1 0 Senescence-associated protein ApoLp-III PF07464.11 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.047 13.8 10.7 0.17 12.0 10.7 1.8 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) PglZ PF08665.12 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.047 13.8 3.4 0.059 13.5 3.4 1.3 1 0 0 1 1 1 0 PglZ domain DUF5082 PF16888.5 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.066 13.5 15.6 0.12 12.6 15.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) DUF883 PF05957.13 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.08 13.6 3.9 0.8 10.3 3.6 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) WTX PF09422.10 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.092 11.8 4.1 0.11 11.6 4.1 1.0 1 0 0 1 1 1 0 WTX protein DUF1664 PF07889.12 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.12 12.4 6.5 0.17 11.9 6.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) ZYG-11_interact PF05884.12 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.12 11.7 4.0 0.14 11.6 4.0 1.1 1 0 0 1 1 1 0 Interactor of ZYG-11 MADF_DNA_bdg PF10545.9 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.13 12.5 8.3 0.081 13.2 2.2 2.1 1 1 1 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like Fib_alpha PF08702.10 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.15 12.2 14.8 0.37 11.0 14.8 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_S21 PF00716.17 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.15 11.7 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 Assemblin (Peptidase family S21) DUF2400 PF09674.10 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.22 11.5 3.8 0.25 11.3 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) Prefoldin_2 PF01920.20 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.22 11.5 18.6 1.1 9.3 6.4 2.2 1 1 1 2 2 2 0 Prefoldin subunit Myb_DNA-bind_4 PF13837.6 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.3 11.5 8.5 6 7.3 2.2 2.2 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain Exonuc_VII_L PF02601.15 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.3 10.6 8.1 0.36 10.4 8.1 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit FapA PF03961.13 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.4 9.2 12.3 0.45 9.1 12.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4140 PF13600.6 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.61 10.6 6.1 4.2 7.9 6.1 2.1 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) GrpE PF01025.19 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 0.78 9.4 12.4 3.9 7.1 12.4 1.7 1 1 0 1 1 1 0 GrpE DUF724 PF05266.14 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 1.2 8.9 14.4 4 7.2 14.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Jnk-SapK_ap_N PF09744.9 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 1.4 9.1 13.9 7.7 6.7 13.8 1.9 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 FliD_C PF07195.12 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 1.4 8.3 13.6 1.6 8.1 2.9 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus DUF4407 PF14362.6 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 1.7 7.9 6.3 2.1 7.6 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AI-2E_transport PF01594.16 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 1.8 7.7 4.0 2 7.5 3.1 1.5 1 1 1 2 2 2 0 AI-2E family transporter DUF3800 PF12686.7 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 1.9 9.2 5.5 2.5 8.8 5.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3800) Allexi_40kDa PF05549.11 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 2.4 7.6 7.6 2.9 7.3 7.6 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein CHASE6_C PF17150.4 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 2.6 8.8 8.3 2.2 9.0 1.3 2.1 1 1 1 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain FlaC_arch PF05377.11 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 4.4 7.8 10.1 1.3 9.4 0.9 2.9 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) HAUS6_N PF14661.6 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 4.7 6.7 12.3 10 5.7 12.3 1.5 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Cep57_MT_bd PF06657.13 NODE_53058_length_334_cov_81.043478_g45133_i0forward_frame_1 - 7.4 7.1 14.2 1.3 9.5 2.0 2.1 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Pkinase PF00069.25 NODE_53044_length_334_cov_146.317726_g45119_i0reverse_frame_1 - 0.0018 17.7 0.0 0.0023 17.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DUF2527 PF10736.9 NODE_53043_length_334_cov_156.438127_g45118_i0forward_frame_1 - 0.074 12.9 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) Hyphal_reg_CWP PF11765.8 NODE_53041_length_334_cov_185.732441_g45116_i0reverse_frame_1 - 0.14 11.1 0.1 0.17 10.8 0.1 1.1 1 0 0 1 1 1 0 Hyphally regulated cell wall protein N-terminal DUF5346 PF17281.2 NODE_53022_length_335_cov_1.450000_g45097_i0forward_frame_1 - 0.1 12.6 0.2 0.17 11.9 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5346) DUF5346 PF17281.2 NODE_53021_length_335_cov_1.583333_g45096_i0forward_frame_1 - 0.1 12.6 0.2 0.17 11.9 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5346) Presenilin PF01080.17 NODE_53019_length_335_cov_1.676667_g45094_i0reverse_frame_1 - 0.0042 15.9 0.9 0.0046 15.8 0.9 1.0 1 0 0 1 1 1 1 Presenilin Phtf-FEM1B_bdg PF12129.8 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_1 - 0.15 11.9 0.1 0.17 11.7 0.1 1.1 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor Mg_trans_NIPA PF05653.14 NODE_53010_length_335_cov_1.920000_g45085_i0forward_frame_1 - 2.7e-09 36.6 0.2 3e-09 36.4 0.2 1.0 1 0 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 NODE_53010_length_335_cov_1.920000_g45085_i0forward_frame_1 - 7.8e-06 26.1 5.3 9.8e-06 25.8 5.3 1.1 1 0 0 1 1 1 1 EamA-like transporter family CRT-like PF08627.10 NODE_53010_length_335_cov_1.920000_g45085_i0forward_frame_1 - 0.0089 15.0 0.1 0.0094 14.9 0.1 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like PspC PF04024.12 NODE_53010_length_335_cov_1.920000_g45085_i0forward_frame_1 - 4 7.3 6.6 20 5.1 6.6 2.0 1 1 0 1 1 1 0 PspC domain ALG11_N PF15924.5 NODE_53008_length_335_cov_2.300000_g45083_i0reverse_frame_1 - 0.022 14.8 0.5 0.025 14.6 0.5 1.2 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus DUF4538 PF15061.6 NODE_53008_length_335_cov_2.300000_g45083_i0forward_frame_1 - 0.019 14.7 0.6 0.033 13.9 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) AAA_5 PF07728.14 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 2.6e-10 40.4 0.0 3.9e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.00036 21.0 0.1 0.00054 20.4 0.1 1.2 1 0 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.024 14.0 0.1 0.037 13.4 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.11 12.3 0.6 0.28 10.9 0.6 1.6 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.11 12.8 0.1 5 7.4 0.0 2.1 1 1 1 2 2 2 0 AAA domain PhoH PF02562.16 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.13 11.7 0.1 3.2 7.1 0.0 2.0 1 1 1 2 2 2 0 PhoH-like protein ABC_tran PF00005.27 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.14 12.6 0.2 0.2 12.2 0.2 1.2 1 0 0 1 1 1 0 ABC transporter Paf1 PF03985.13 NODE_53000_length_335_cov_2.900000_g45075_i0forward_frame_1 - 0.0094 15.0 0.1 0.01 14.8 0.1 1.0 1 0 0 1 1 1 1 Paf1 DUF1195 PF06708.11 NODE_52999_length_335_cov_2.913333_g45074_i0reverse_frame_1 - 0.03 14.1 0.0 0.043 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1195) ISK_Channel PF02060.15 NODE_52999_length_335_cov_2.913333_g45074_i0reverse_frame_1 - 0.15 11.8 0.2 0.16 11.7 0.2 1.2 1 0 0 1 1 1 0 Slow voltage-gated potassium channel SLT_L PF14718.6 NODE_52991_length_335_cov_3.806667_g45066_i0forward_frame_1 - 0.034 14.3 0.3 0.052 13.7 0.3 1.3 1 0 0 1 1 1 0 Soluble lytic murein transglycosylase L domain Ras PF00071.22 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_1 - 1.2e-06 28.2 0.0 1.4e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Ras family DUF1493 PF07377.12 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_1 - 0.012 16.1 0.3 0.02 15.4 0.3 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1493) RsgA_GTPase PF03193.16 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_1 - 0.032 14.1 0.0 0.04 13.8 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase Iron_permease PF04120.12 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_1 - 0.067 13.0 0.2 0.077 12.8 0.2 1.1 1 0 0 1 1 1 0 Low affinity iron permease DUF604 PF04646.12 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_1 - 0.14 11.5 2.8 0.16 11.3 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF604 Comm PF15957.5 NODE_52977_length_335_cov_50.660000_g45052_i0reverse_frame_1 - 0.052 13.9 0.6 0.063 13.6 0.6 1.1 1 0 0 1 1 1 0 Commissureless Carbpep_Y_N PF05388.11 NODE_52977_length_335_cov_50.660000_g45052_i0reverse_frame_1 - 1.2 9.7 11.0 2.5 8.6 11.0 1.6 1 1 0 1 1 1 0 Carboxypeptidase Y pro-peptide BACON PF13004.7 NODE_52974_length_335_cov_57.226667_g45049_i0forward_frame_1 - 0.22 11.6 0.1 0.3 11.1 0.1 1.2 1 0 0 1 1 1 0 Putative binding domain, N-terminal GlutR_dimer PF00745.20 NODE_52972_length_335_cov_60.383333_g45047_i0reverse_frame_1 - 0.085 13.3 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain Torus PF16131.5 NODE_52971_length_335_cov_63.546667_g45046_i0reverse_frame_1 - 0.005 17.5 0.1 0.0069 17.1 0.1 1.3 1 1 0 1 1 1 1 Torus domain DUF4135 PF13575.6 NODE_52970_length_335_cov_66.046667_g45045_i0reverse_frame_1 - 0.13 11.6 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) PPR_2 PF13041.6 NODE_52968_length_335_cov_68.336667_g45043_i0reverse_frame_1 - 1.6e-12 47.4 0.2 3.5e-08 33.5 0.0 1.8 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_52968_length_335_cov_68.336667_g45043_i0reverse_frame_1 - 1.1e-10 41.4 0.0 1.6e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_52968_length_335_cov_68.336667_g45043_i0reverse_frame_1 - 1.5e-05 24.6 0.0 0.0037 16.9 0.0 2.5 3 0 0 3 3 3 2 PPR repeat PPR PF01535.20 NODE_52968_length_335_cov_68.336667_g45043_i0reverse_frame_1 - 0.00016 21.7 0.1 0.0037 17.4 0.0 2.8 3 0 0 3 3 3 1 PPR repeat PPR_long PF17177.4 NODE_52968_length_335_cov_68.336667_g45043_i0reverse_frame_1 - 0.0021 17.5 0.0 0.0025 17.2 0.0 1.1 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP HWE_HK PF07536.14 NODE_52967_length_335_cov_72.453333_g45042_i0forward_frame_1 - 0.29 11.9 3.9 1.3 9.8 2.5 2.2 1 1 1 2 2 2 0 HWE histidine kinase YrpD PF15493.6 NODE_52952_length_335_cov_115.846667_g45027_i0reverse_frame_1 - 0.049 13.5 0.1 0.056 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function, YrpD DUF4604 PF15377.6 NODE_52949_length_335_cov_124.033333_g45024_i0forward_frame_1 - 0.25 11.7 9.1 0.34 11.3 9.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) US10 PF17617.2 NODE_52947_length_335_cov_137.023333_g45022_i0forward_frame_1 - 0.012 15.7 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 Viral unique short region 10 Pkinase PF00069.25 NODE_52945_length_335_cov_145.723333_g45020_i0forward_frame_1 - 0.0016 17.9 0.0 0.0023 17.3 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain DUF5094 PF17015.5 NODE_52943_length_335_cov_153.616667_g45018_i0forward_frame_1 - 0.055 13.6 0.1 0.073 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) DUF3572 PF12096.8 NODE_52943_length_335_cov_153.616667_g45018_i0forward_frame_1 - 0.18 12.0 0.0 0.27 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3572) DRY_EERY PF09750.9 NODE_52940_length_335_cov_181.936667_g45015_i0reverse_frame_1 - 0.016 15.5 1.2 0.022 15.0 1.2 1.2 1 0 0 1 1 1 0 Alternative splicing regulator Neurokinin_B PF03823.14 NODE_52937_length_335_cov_253.666667_g45012_i0reverse_frame_1 - 0.087 12.9 0.8 0.18 11.9 0.8 1.8 1 1 0 1 1 1 0 Neurokinin B CI-B14_5a PF07347.12 NODE_52935_length_335_cov_294.490000_g45010_i0reverse_frame_1 - 0.05 13.5 0.3 0.062 13.2 0.3 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) Lamprin PF06403.11 NODE_52933_length_335_cov_475.313333_g45008_i0forward_frame_1 - 0.97 9.4 5.3 1.3 9.0 5.3 1.2 1 0 0 1 1 1 0 Lamprin DUF4845 PF16137.5 NODE_52930_length_335_cov_712.300000_g45005_i0reverse_frame_1 - 0.022 15.6 0.1 0.04 14.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4845) DUF1476 PF07345.11 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_1 - 0.24 11.8 3.4 23 5.4 0.1 3.2 2 1 1 3 3 3 0 ATPase inhibitor subunit zeta LBR_tudor PF09465.10 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_1 - 1.2 9.0 11.2 33 4.4 0.1 4.1 4 0 0 4 4 4 0 Lamin-B receptor of TUDOR domain Prok-RING_2 PF14445.6 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_1 - 2.1 8.6 8.5 27 5.0 0.1 3.5 3 1 1 4 4 4 0 Prokaryotic RING finger family 2 FNIP PF05725.12 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_1 - 2e-30 104.7 13.1 9.4e-13 48.1 2.1 3.1 3 0 0 3 3 3 3 FNIP Repeat LRR_5 PF13306.6 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_1 - 0.00034 20.6 0.2 0.00061 19.7 0.2 1.4 1 1 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) Glyco_hydro_65C PF03633.15 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_1 - 0.0008 19.3 0.5 29 4.7 0.0 4.5 5 0 0 5 5 5 2 Glycosyl hydrolase family 65, C-terminal domain LRR_11 PF18831.1 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_1 - 0.27 10.9 25.2 2.3 7.8 0.5 5.3 5 0 0 5 5 5 0 Leucine-rich repeat Sua5_yciO_yrdC PF01300.18 NODE_52921_length_336_cov_1.265781_g44996_i0forward_frame_1 - 9.2e-10 38.3 0.0 1.5e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination OST3_OST6 PF04756.13 NODE_52917_length_336_cov_1.445183_g44992_i0reverse_frame_1 - 0.0019 17.6 1.1 0.0022 17.4 1.1 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family AlaDh_PNT_N PF05222.15 NODE_52914_length_336_cov_1.754153_g44989_i0reverse_frame_1 - 0.033 14.5 2.2 0.046 14.0 2.2 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, N-terminal domain Cleaved_Adhesin PF07675.11 NODE_52914_length_336_cov_1.754153_g44989_i0forward_frame_1 - 0.061 13.3 0.3 0.08 12.9 0.3 1.1 1 0 0 1 1 1 0 Cleaved Adhesin Domain SRP54 PF00448.22 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 1.2e-11 44.6 0.3 1.2e-11 44.6 0.3 1.7 2 1 0 2 2 2 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 9.5e-07 29.0 0.3 1.5e-06 28.3 0.3 1.4 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain MeaB PF03308.16 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 2.8e-06 26.5 0.1 6.7e-06 25.3 0.0 1.6 1 1 1 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.00075 19.6 0.1 0.0014 18.6 0.1 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0022 18.4 0.0 0.0032 17.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0026 17.9 0.6 0.012 15.8 0.1 1.9 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0031 17.5 0.4 0.0038 17.2 0.4 1.3 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit MobB PF03205.14 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0042 17.0 0.4 0.018 14.9 0.1 1.9 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0058 16.4 0.4 0.024 14.4 0.1 1.8 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0065 16.2 0.5 0.014 15.2 0.3 1.7 1 1 1 2 2 2 1 IstB-like ATP binding protein ATPase PF06745.13 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0085 15.5 0.5 0.017 14.5 0.3 1.7 1 1 1 2 2 2 1 KaiC AAA_31 PF13614.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.019 14.9 0.4 0.038 13.9 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.023 14.3 0.1 0.035 13.7 0.1 1.3 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.031 14.8 0.0 0.1 13.1 0.0 1.8 2 0 0 2 2 2 0 ABC transporter Arf PF00025.21 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.04 13.4 0.3 0.1 12.1 0.1 1.7 1 1 1 2 2 2 0 ADP-ribosylation factor family APS_kinase PF01583.20 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.046 13.6 0.2 0.099 12.5 0.1 1.5 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_14 PF13173.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.061 13.3 1.2 0.39 10.7 0.2 2.1 1 1 1 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.087 12.5 0.1 0.27 10.9 0.0 1.7 2 0 0 2 2 2 0 Thymidylate kinase SopE_GEF PF07487.13 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.098 12.8 0.3 0.15 12.1 0.2 1.3 1 1 0 1 1 1 0 SopE GEF domain AAA_5 PF07728.14 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.1 12.6 0.3 1 9.4 0.0 2.2 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) SRPRB PF09439.10 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.11 11.9 1.3 3 7.2 0.1 2.1 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit DUF2375 PF09558.10 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.14 12.2 0.1 0.27 11.3 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2375) NDUF_B5 PF09781.9 NODE_52910_length_336_cov_1.906977_g44985_i0forward_frame_1 - 0.2 11.2 0.1 0.2 11.2 0.1 1.3 2 0 0 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit DUF844 PF05815.11 NODE_52909_length_336_cov_2.046512_g44984_i0forward_frame_1 - 0.024 13.9 0.0 0.03 13.5 0.0 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF844) SpoU_sub_bind PF08032.12 NODE_52909_length_336_cov_2.046512_g44984_i0forward_frame_1 - 0.1 12.9 0.0 0.44 10.9 0.0 1.8 1 1 1 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding VEGFR-2_TMD PF17988.1 NODE_52907_length_336_cov_2.066445_g44982_i0reverse_frame_1 - 0.11 12.0 1.3 0.16 11.4 1.3 1.3 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain Pneumo_ncap PF03246.13 NODE_52904_length_336_cov_2.398671_g44979_i0reverse_frame_1 - 0.058 12.2 0.6 0.076 11.8 0.6 1.1 1 0 0 1 1 1 0 Pneumovirus nucleocapsid protein Spem1 PF15670.5 NODE_52902_length_336_cov_2.435216_g44977_i0reverse_frame_1 - 0.14 11.8 6.9 0.15 11.6 6.9 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 KELK PF15796.5 NODE_52902_length_336_cov_2.435216_g44977_i0reverse_frame_1 - 0.14 12.6 4.1 0.26 11.8 3.9 1.6 1 1 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Peripla_BP_6 PF13458.6 NODE_52889_length_336_cov_3.408638_g44964_i0reverse_frame_1 - 0.062 13.0 0.0 0.075 12.7 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding protein BESS PF02944.20 NODE_52888_length_336_cov_5.807309_g44963_i0reverse_frame_1 - 1.8 8.4 3.8 32 4.5 0.7 2.7 2 1 0 2 2 2 0 BESS motif DAP10 PF07213.11 NODE_52886_length_336_cov_8.843854_g44961_i0reverse_frame_1 - 0.071 13.1 0.7 0.23 11.4 0.1 1.9 1 1 1 2 2 2 0 DAP10 membrane protein DUF4105 PF13387.6 NODE_52885_length_336_cov_25.431894_g44960_i0reverse_frame_1 - 0.098 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4105) DUF4227 PF14004.6 NODE_52884_length_336_cov_36.308970_g44959_i0reverse_frame_1 - 0.1 12.6 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) ROQ_II PF18386.1 NODE_52872_length_336_cov_68.764120_g44947_i0reverse_frame_1 - 0.019 14.8 0.0 0.028 14.3 0.0 1.3 1 0 0 1 1 1 0 Roquin II domain SAM_DrpA PF18255.1 NODE_52868_length_336_cov_72.760797_g44943_i0forward_frame_1 - 0.029 14.6 0.0 0.85 9.9 0.0 2.2 2 0 0 2 2 2 0 DNA processing protein A sterile alpha motif domain DUF4106 PF13388.6 NODE_52867_length_336_cov_73.172757_g44942_i0reverse_frame_1 - 0.48 9.6 4.0 0.56 9.4 4.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) Inhibitor_I68 PF10468.9 NODE_52867_length_336_cov_73.172757_g44942_i0reverse_frame_1 - 0.73 10.3 6.2 5.3 7.5 6.2 2.0 1 1 0 1 1 1 0 Carboxypeptidase inhibitor I68 SfsA PF03749.13 NODE_52860_length_336_cov_89.840532_g44935_i0forward_frame_1 - 0.023 14.6 0.0 0.034 14.0 0.0 1.2 1 0 0 1 1 1 0 Sugar fermentation stimulation protein RE domain KicB PF03882.14 NODE_52857_length_336_cov_94.112957_g44932_i0reverse_frame_1 - 0.045 13.9 0.0 0.056 13.7 0.0 1.2 1 0 0 1 1 1 0 MukF winged-helix domain Cnd1 PF12717.7 NODE_52857_length_336_cov_94.112957_g44932_i0reverse_frame_1 - 0.062 13.4 0.0 0.071 13.2 0.0 1.1 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 FecR PF04773.13 NODE_52856_length_336_cov_96.966777_g44931_i0forward_frame_1 - 0.089 13.4 0.2 0.11 13.2 0.2 1.2 1 0 0 1 1 1 0 FecR protein Borrelia_rep PF03183.13 NODE_52854_length_336_cov_103.348837_g44929_i0reverse_frame_1 - 0.62 10.2 4.6 1.4 9.1 0.2 2.3 2 0 0 2 2 2 0 Borrelia repeat protein DUF1272 PF06906.11 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_1 - 0.0027 17.8 8.5 0.41 10.8 6.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1272) Phtf-FEM1B_bdg PF12129.8 NODE_52837_length_336_cov_593.730897_g44912_i0reverse_frame_1 - 0.0091 15.8 1.0 0.011 15.6 1.0 1.1 1 0 0 1 1 1 1 Male germ-cell putative homeodomain transcription factor EF-hand_7 PF13499.6 NODE_52834_length_337_cov_0.990066_g44910_i0forward_frame_3 - 0.00092 19.6 0.0 0.0012 19.2 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_52834_length_337_cov_0.990066_g44910_i0forward_frame_3 - 0.0012 18.6 0.1 0.0031 17.3 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 NODE_52834_length_337_cov_0.990066_g44910_i0forward_frame_3 - 0.015 14.7 0.6 0.029 13.8 0.6 1.5 1 0 0 1 1 1 0 EF hand EF-hand_1 PF00036.32 NODE_52834_length_337_cov_0.990066_g44910_i0forward_frame_3 - 0.016 14.7 0.2 0.035 13.7 0.2 1.6 1 0 0 1 1 1 0 EF hand Cytochrom_NNT PF03264.14 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 3.7e-39 134.2 0.3 4e-39 134.1 0.3 1.0 1 0 0 1 1 1 1 NapC/NirT cytochrome c family, N-terminal region Paired_CXXCH_1 PF09699.10 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.00041 20.0 2.6 0.13 12.0 0.5 2.3 2 0 0 2 2 2 2 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_P460 PF16694.5 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.0017 18.7 2.7 0.067 13.5 0.1 2.3 1 1 1 2 2 2 1 Cytochrome P460 Cytochrom_CIII PF02085.16 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.0042 17.4 4.9 0.37 11.1 5.3 2.3 1 1 1 2 2 2 2 Class III cytochrome C family Cytochrome_C7 PF14522.6 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.017 15.1 5.1 0.054 13.5 4.8 1.7 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.032 14.7 3.6 0.042 14.3 2.5 1.6 1 1 0 1 1 1 0 Cytochrome c3 Cytochrome_CBB3 PF13442.6 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.055 13.8 0.3 3.2 8.2 0.0 2.2 2 0 0 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III Defensin_5 PF18251.1 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.061 13.4 1.7 6.4 7.0 0.1 2.2 2 0 0 2 2 2 0 Fungal defensin Copsin Cytochrome_C554 PF13435.6 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.067 14.1 2.1 1.4 9.8 2.8 2.2 1 1 1 2 2 2 0 Cytochrome c554 and c-prime CCP_MauG PF03150.14 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.11 13.1 3.3 4.9 7.8 0.2 2.1 1 1 1 2 2 2 0 Di-haem cytochrome c peroxidase Cytochrom_C PF00034.21 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.81 10.9 3.9 31 5.8 3.9 2.3 1 1 0 1 1 1 0 Cytochrome c Thioredoxin_12 PF18400.1 NODE_52829_length_337_cov_1.549669_g44905_i0reverse_frame_2 - 0.019 14.8 0.6 0.026 14.4 0.6 1.3 1 1 0 1 1 1 0 Thioredoxin-like domain BaffR-Tall_bind PF09256.10 NODE_52829_length_337_cov_1.549669_g44905_i0forward_frame_2 - 2.6 7.9 4.9 30 4.5 0.1 3.2 3 0 0 3 3 3 0 BAFF-R, TALL-1 binding DotA PF11388.8 NODE_52826_length_337_cov_1.798013_g44902_i0forward_frame_3 - 0.062 13.5 0.1 0.075 13.2 0.1 1.3 1 0 0 1 1 1 0 Phagosome trafficking protein DotA ArgoMid PF16487.5 NODE_52824_length_337_cov_1.910596_g44900_i0forward_frame_3 - 0.01 16.1 0.1 0.015 15.5 0.1 1.3 1 0 0 1 1 1 0 Mid domain of argonaute Bac_DNA_binding PF00216.21 NODE_52817_length_337_cov_2.115894_g44893_i0reverse_frame_2 - 2.3e-22 79.0 0.0 3.1e-22 78.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 NODE_52817_length_337_cov_2.115894_g44893_i0reverse_frame_2 - 6e-07 29.6 0.0 6.9e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 NODE_52817_length_337_cov_2.115894_g44893_i0reverse_frame_2 - 0.00024 20.9 0.0 0.00039 20.2 0.0 1.4 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-DNA_bdg PF14848.6 NODE_52817_length_337_cov_2.115894_g44893_i0reverse_frame_2 - 0.018 15.1 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 DNA-binding domain HU-CCDC81_euk_2 PF18289.1 NODE_52817_length_337_cov_2.115894_g44893_i0reverse_frame_2 - 0.032 14.4 0.0 0.14 12.3 0.0 1.9 2 0 0 2 2 2 0 CCDC81 eukaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 NODE_52817_length_337_cov_2.115894_g44893_i0reverse_frame_2 - 0.06 13.5 0.0 0.078 13.1 0.0 1.2 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 1 Ribosomal_L27_C PF18471.1 NODE_52817_length_337_cov_2.115894_g44893_i0reverse_frame_2 - 0.15 11.4 0.0 0.21 11.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal L27 protein C-terminal domain Sec23_trunk PF04811.15 NODE_52817_length_337_cov_2.115894_g44893_i0reverse_frame_2 - 0.18 11.4 0.1 0.24 10.9 0.1 1.2 1 0 0 1 1 1 0 Sec23/Sec24 trunk domain YecR PF13992.6 NODE_52817_length_337_cov_2.115894_g44893_i0forward_frame_3 - 0.022 15.0 0.1 0.03 14.6 0.1 1.3 1 0 0 1 1 1 0 YecR-like lipoprotein Caveolin PF01146.17 NODE_52816_length_337_cov_2.198675_g44892_i0forward_frame_2 - 0.099 12.6 3.3 0.12 12.3 3.3 1.2 1 0 0 1 1 1 0 Caveolin RCC1_2 PF13540.6 NODE_52814_length_337_cov_2.231788_g44890_i0reverse_frame_3 - 1.5e-06 27.8 1.4 0.061 13.1 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PAN_3 PF08277.12 NODE_52813_length_337_cov_2.245033_g44889_i0forward_frame_2 - 0.031 14.1 0.3 0.031 14.1 0.3 1.5 2 0 0 2 2 2 0 PAN-like domain GSH_synthase PF03199.15 NODE_52807_length_337_cov_2.771523_g44883_i0forward_frame_2 - 0.072 13.5 0.5 0.12 12.9 0.4 1.5 1 1 0 1 1 1 0 Eukaryotic glutathione synthase DUF1943 PF09172.11 NODE_52806_length_337_cov_2.774834_g44882_i0reverse_frame_3 - 0.036 13.3 1.5 0.039 13.2 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Thioredoxin_11 PF18078.1 NODE_52806_length_337_cov_2.774834_g44882_i0reverse_frame_3 - 0.23 11.6 3.1 0.22 11.7 2.0 1.5 1 1 0 1 1 1 0 Thioredoxin-like SNTX domain MacB_PCD PF12704.7 NODE_52804_length_337_cov_2.903974_g44880_i0reverse_frame_2 - 0.00038 20.9 0.3 0.00052 20.4 0.3 1.2 1 0 0 1 1 1 1 MacB-like periplasmic core domain PD-C2-AF1 PF09310.10 NODE_52804_length_337_cov_2.903974_g44880_i0forward_frame_2 - 0.054 12.9 0.1 0.075 12.4 0.1 1.1 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 Fe_dep_repress PF01325.19 NODE_52804_length_337_cov_2.903974_g44880_i0forward_frame_2 - 0.17 12.1 0.0 0.26 11.5 0.0 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks208.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks208.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks208.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks208.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RINGv PF12906.7 NODE_52802_length_337_cov_3.062914_g44878_i0reverse_frame_3 - 0.076 13.2 0.3 0.15 12.2 0.3 1.5 1 0 0 1 1 1 0 RING-variant domain FAM183 PF14886.6 NODE_52802_length_337_cov_3.062914_g44878_i0reverse_frame_2 - 0.13 13.0 3.0 0.19 12.5 3.0 1.3 1 0 0 1 1 1 0 FAM183A and FAM183B related Thioredoxin_8 PF13905.6 NODE_52799_length_337_cov_3.490066_g44875_i0reverse_frame_3 - 0.051 13.9 0.0 0.073 13.4 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like Lge1 PF11488.8 NODE_52799_length_337_cov_3.490066_g44875_i0reverse_frame_3 - 0.092 12.9 0.1 0.35 11.1 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulatory protein LGE1 Lamprin PF06403.11 NODE_52797_length_337_cov_4.506623_g44873_i0forward_frame_2 - 2.5 8.1 11.9 5.4 7.0 2.3 2.1 1 1 1 2 2 2 0 Lamprin ORF6C PF10552.9 NODE_52795_length_337_cov_4.778146_g44871_i0reverse_frame_2 - 0.039 14.1 0.1 0.057 13.5 0.1 1.3 1 1 0 1 1 1 0 ORF6C domain 7TMR-DISMED2 PF07696.11 NODE_52794_length_337_cov_5.701987_g44870_i0reverse_frame_2 - 0.087 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 7TMR-DISM extracellular 2 YwcE PF17368.2 NODE_52794_length_337_cov_5.701987_g44870_i0forward_frame_2 - 0.041 14.5 3.7 0.058 14.1 3.7 1.2 1 0 0 1 1 1 0 Spore morphogenesis and germination YwcE SLS PF14611.6 NODE_52790_length_337_cov_46.668874_g44866_i0reverse_frame_2 - 0.0062 16.4 2.6 0.0072 16.2 2.6 1.1 1 0 0 1 1 1 1 Mitochondrial inner-membrane-bound regulator DUF4878 PF12870.7 NODE_52790_length_337_cov_46.668874_g44866_i0reverse_frame_2 - 0.0087 16.4 3.2 0.014 15.7 3.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4878) BolA PF01722.18 NODE_52790_length_337_cov_46.668874_g44866_i0reverse_frame_2 - 0.015 15.5 0.0 0.021 15.1 0.0 1.4 1 0 0 1 1 1 0 BolA-like protein Nop14 PF04147.12 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 0.44 8.7 17.1 0.41 8.8 17.1 1.0 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 0.5 9.8 17.4 0.47 9.8 17.4 1.1 1 0 0 1 1 1 0 SDA1 Sigma70_ner PF04546.13 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 1.4 8.7 14.7 1.7 8.5 14.7 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region CobT PF06213.12 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 1.7 8.0 17.5 2.1 7.6 17.5 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT TFB6 PF17110.5 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 1.8 8.3 5.9 2 8.2 5.9 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH CDC45 PF02724.14 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 2.8 6.1 15.8 3.3 5.9 15.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Pox_Ag35 PF03286.14 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 3.9 7.2 9.5 4.4 7.0 9.5 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein PPP4R2 PF09184.11 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 4.7 6.7 13.7 4.7 6.7 13.7 1.2 1 0 0 1 1 1 0 PPP4R2 Paf1 PF03985.13 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 9.9 5.0 15.7 12 4.7 15.7 1.0 1 0 0 1 1 1 0 Paf1 SR-25 PF10500.9 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_2 - 0.0028 17.3 8.6 0.0028 17.3 8.6 2.0 1 1 1 2 2 2 1 Nuclear RNA-splicing-associated protein DUF4763 PF15960.5 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.005 16.2 10.6 0.005 16.2 10.6 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4763) ADIP PF11559.8 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.11 12.6 18.0 0.11 12.6 17.2 1.4 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DASH_Hsk3 PF08227.11 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.25 11.8 6.6 3.2 8.2 0.7 2.6 1 1 1 2 2 2 0 DASH complex subunit Hsk3 like DUF484 PF04340.12 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.26 11.0 6.0 0.37 10.5 6.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF484 UPF0242 PF06785.11 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.32 11.1 22.9 0.39 10.8 22.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Hemagglutinin PF00509.18 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.75 8.1 6.4 0.89 7.9 6.4 1.1 1 0 0 1 1 1 0 Haemagglutinin Fzo_mitofusin PF04799.13 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.82 9.2 8.9 1.2 8.7 8.8 1.4 1 1 0 1 1 1 0 fzo-like conserved region 5_nucleotid PF05761.14 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.94 8.3 9.2 1.1 8.1 9.2 1.1 1 0 0 1 1 1 0 5' nucleotidase family DUF3945 PF13101.6 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 1.2 8.9 7.0 3 7.6 7.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3945) Exonuc_VII_L PF02601.15 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 5.2 6.6 11.3 5.9 6.4 11.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit VMA21 PF09446.10 NODE_52778_length_337_cov_72.586093_g44854_i0reverse_frame_2 - 2 8.6 6.3 0.13 12.4 1.1 1.7 2 0 0 2 2 2 0 VMA21-like domain MBD PF01429.19 NODE_52776_length_337_cov_74.804636_g44852_i0reverse_frame_3 - 0.031 14.0 0.0 0.045 13.5 0.0 1.2 1 0 0 1 1 1 0 Methyl-CpG binding domain Phasin PF05597.11 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.0052 16.8 3.5 0.0065 16.5 3.5 1.1 1 0 0 1 1 1 1 Poly(hydroxyalcanoate) granule associated protein (phasin) WPP PF13943.6 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.0061 16.9 0.1 0.0079 16.6 0.1 1.2 1 0 0 1 1 1 1 WPP domain OmpH PF03938.14 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.011 16.0 2.8 0.014 15.8 2.8 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) MAT1 PF06391.13 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.054 13.3 7.9 0.067 13.0 7.9 1.0 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 Gp_dh_N PF00044.24 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.14 12.5 0.6 0.19 12.1 0.6 1.2 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TMPIT PF07851.13 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.15 11.3 1.9 0.17 11.1 1.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein Ima1_N PF09779.9 NODE_52770_length_337_cov_84.327815_g44846_i0reverse_frame_3 - 0.0032 18.3 0.5 0.004 18.0 0.5 1.1 1 0 0 1 1 1 1 Ima1 N-terminal domain Histone_H2A_C PF16211.5 NODE_52770_length_337_cov_84.327815_g44846_i0reverse_frame_3 - 0.26 11.0 1.9 0.4 10.4 1.9 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Fer4_2 PF12797.7 NODE_52762_length_337_cov_107.463576_g44838_i0reverse_frame_3 - 0.16 12.1 3.3 1.4 9.1 0.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain zf-CCHC_2 PF13696.6 NODE_52762_length_337_cov_107.463576_g44838_i0forward_frame_2 - 1.8 8.4 8.0 0.2 11.5 2.5 2.4 2 0 0 2 2 2 0 Zinc knuckle ELH PF02323.15 NODE_52760_length_337_cov_125.370861_g44836_i0reverse_frame_2 - 0.019 14.4 0.4 0.02 14.3 0.4 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor PH_TFIIH PF08567.11 NODE_52759_length_337_cov_136.688742_g44835_i0forward_frame_2 - 0.022 15.1 0.2 0.034 14.5 0.2 1.4 1 1 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain Parathyroid PF01279.17 NODE_52758_length_337_cov_148.854305_g44834_i0forward_frame_2 - 0.18 12.4 0.1 0.3 11.7 0.1 1.3 1 0 0 1 1 1 0 Parathyroid hormone family SH3_15 PF18346.1 NODE_52753_length_337_cov_221.582781_g44829_i0reverse_frame_3 - 0.07 13.5 0.2 0.1 13.0 0.2 1.2 1 0 0 1 1 1 0 Mind bomb SH3 repeat domain IL4 PF00727.18 NODE_52749_length_337_cov_264.850993_g44825_i0forward_frame_3 - 0.0054 16.9 0.1 0.0054 16.9 0.1 1.2 1 0 0 1 1 1 1 Interleukin 4 DAN PF03045.15 NODE_52747_length_337_cov_478.642384_g44823_i0forward_frame_3 - 0.0087 16.1 0.2 0.014 15.4 0.2 1.3 1 0 0 1 1 1 1 DAN domain COMPASS-Shg1 PF05205.12 NODE_52745_length_337_cov_3983.917219_g44821_i0forward_frame_2 - 0.0034 18.1 0.2 0.0039 17.9 0.2 1.1 1 0 0 1 1 1 1 COMPASS (Complex proteins associated with Set1p) component shg1 Tryp_inh PF17983.1 NODE_52742_length_338_cov_1.231023_g44818_i0forward_frame_2 - 0.3 11.2 1.9 0.48 10.5 1.9 1.4 1 0 0 1 1 1 0 Trypsin inhibitors 1,2 and 3 SAPS PF04499.15 NODE_52741_length_338_cov_1.316832_g44817_i0reverse_frame_3 - 1.7 7.3 3.8 2.2 7.0 3.8 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein HMMR_N PF15905.5 NODE_52739_length_338_cov_1.442244_g44815_i0reverse_frame_2 - 0.022 14.3 0.1 0.024 14.1 0.1 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Fimbrillin_C PF15495.6 NODE_52737_length_338_cov_1.640264_g44813_i0reverse_frame_2 - 0.01 16.2 3.2 0.014 15.8 3.2 1.3 1 0 0 1 1 1 0 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal DUF2654 PF10849.8 NODE_52737_length_338_cov_1.640264_g44813_i0reverse_frame_2 - 0.5 10.6 6.8 2.1 8.6 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2654) Pro-rich_19 PF15455.6 NODE_52732_length_338_cov_1.706271_g44808_i0forward_frame_3 - 0.094 11.8 4.8 0.1 11.7 4.8 1.1 1 0 0 1 1 1 0 Proline-rich 19 YdjM PF04307.14 NODE_52732_length_338_cov_1.706271_g44808_i0forward_frame_2 - 0.028 13.7 1.3 0.026 13.8 1.3 1.1 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Cation_efflux PF01545.21 NODE_52728_length_338_cov_1.990099_g44804_i0reverse_frame_2 - 9e-08 32.1 1.6 1.2e-07 31.6 1.6 1.2 1 0 0 1 1 1 1 Cation efflux family Mlo PF03094.15 NODE_52727_length_338_cov_2.029703_g44803_i0reverse_frame_3 - 0.16 10.3 0.0 0.19 10.1 0.0 1.0 1 0 0 1 1 1 0 Mlo family YwcE PF17368.2 NODE_52724_length_338_cov_2.191419_g44800_i0forward_frame_2 - 0.078 13.7 0.6 0.078 13.7 0.6 1.8 1 1 0 1 1 1 0 Spore morphogenesis and germination YwcE LytTR PF04397.15 NODE_52723_length_338_cov_2.198020_g44799_i0forward_frame_2 - 0.12 12.6 1.1 7.3 6.9 0.1 2.2 2 0 0 2 2 2 0 LytTr DNA-binding domain Na_H_Exchanger PF00999.21 NODE_52720_length_338_cov_2.349835_g44796_i0forward_frame_3 - 1.1e-15 57.4 4.2 1.2e-15 57.2 4.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF2681 PF10883.8 NODE_52718_length_338_cov_2.425743_g44794_i0reverse_frame_3 - 0.017 15.5 4.4 0.58 10.6 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) Holin_BhlA PF10960.8 NODE_52718_length_338_cov_2.425743_g44794_i0reverse_frame_3 - 0.43 10.6 3.8 21 5.1 3.8 2.2 1 1 0 1 1 1 0 BhlA holin family Cons_hypoth698 PF03601.14 NODE_52718_length_338_cov_2.425743_g44794_i0forward_frame_3 - 0.036 13.0 0.5 0.048 12.6 0.5 1.1 1 0 0 1 1 1 0 Conserved hypothetical protein 698 rpo132 PF12415.8 NODE_52716_length_338_cov_2.462046_g44792_i0reverse_frame_2 - 0.0073 15.6 0.0 0.014 14.7 0.0 1.3 1 0 0 1 1 1 1 Poxvirus DNA dependent RNA polymerase Bax1-I PF01027.20 NODE_52715_length_338_cov_2.600660_g44791_i0forward_frame_2 - 1.3e-08 34.9 4.7 1.5e-08 34.7 4.7 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF2684 PF10885.8 NODE_52715_length_338_cov_2.600660_g44791_i0forward_frame_2 - 0.047 13.8 0.7 0.063 13.4 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) 2OG-FeII_Oxy_4 PF13661.6 NODE_52714_length_338_cov_2.729373_g44790_i0forward_frame_2 - 0.0087 16.7 0.2 0.016 15.8 0.1 1.5 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF5332 PF17266.2 NODE_52711_length_338_cov_2.891089_g44787_i0forward_frame_3 - 0.36 10.5 4.9 2 8.1 0.7 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5332) Pyridox_oxase_2 PF12766.7 NODE_52708_length_338_cov_2.953795_g44784_i0reverse_frame_2 - 0.092 13.4 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase TPR_18 PF13512.6 NODE_52708_length_338_cov_2.953795_g44784_i0forward_frame_2 - 2.7e-55 186.5 1.6 2.9e-55 186.4 1.6 1.0 1 0 0 1 1 1 1 Tetratricopeptide repeat YfiO PF13525.6 NODE_52708_length_338_cov_2.953795_g44784_i0forward_frame_2 - 1.2e-45 155.8 0.6 1.3e-45 155.7 0.6 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein TPR_16 PF13432.6 NODE_52708_length_338_cov_2.953795_g44784_i0forward_frame_2 - 0.00066 20.3 0.4 0.0057 17.3 0.4 2.1 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_52708_length_338_cov_2.953795_g44784_i0forward_frame_2 - 0.0013 19.3 2.8 4.5 8.1 0.0 3.5 3 1 0 3 3 3 2 Tetratricopeptide repeat Cyclin_N PF00134.23 NODE_52705_length_338_cov_3.237624_g44781_i0reverse_frame_2 - 2.6e-05 24.0 0.0 3.7e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain EF-hand_2 PF09068.11 NODE_52705_length_338_cov_3.237624_g44781_i0forward_frame_2 - 0.13 12.5 1.8 0.21 11.7 1.8 1.5 1 1 0 1 1 1 0 EF hand DUF1156 PF06634.12 NODE_52701_length_338_cov_3.544554_g44777_i0forward_frame_3 - 0.089 12.9 0.2 0.14 12.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1156) Trehalase PF01204.18 NODE_52701_length_338_cov_3.544554_g44777_i0forward_frame_2 - 4.3e-24 85.2 0.0 5.3e-24 84.9 0.0 1.1 1 0 0 1 1 1 1 Trehalase HATPase_c PF02518.26 NODE_52699_length_338_cov_3.666667_g44775_i0forward_frame_3 - 1.4e-09 38.4 0.0 2.4e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 NODE_52699_length_338_cov_3.666667_g44775_i0forward_frame_3 - 0.086 12.9 0.3 0.36 10.9 0.2 1.9 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain DUF2651 PF10852.8 NODE_52697_length_338_cov_3.937294_g44773_i0reverse_frame_2 - 0.21 12.2 4.8 0.11 13.1 2.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2651) DUF3772 PF12607.8 NODE_52695_length_338_cov_8.788779_g44771_i0reverse_frame_2 - 0.087 12.6 0.6 0.087 12.6 0.6 2.1 3 1 0 3 3 3 0 Protein of unknown function (DUF3772) DUF1104 PF06518.11 NODE_52695_length_338_cov_8.788779_g44771_i0reverse_frame_2 - 0.092 13.1 2.4 0.29 11.5 0.6 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF1104) CPP1-like PF11833.8 NODE_52684_length_338_cov_57.528053_g44760_i0forward_frame_2 - 0.67 9.6 4.7 0.76 9.4 4.7 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like RseC_MucC PF04246.12 NODE_52684_length_338_cov_57.528053_g44760_i0forward_frame_2 - 5.6 6.9 7.2 7.7 6.5 7.2 1.3 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF1422 PF07226.11 NODE_52683_length_338_cov_58.551155_g44759_i0reverse_frame_3 - 0.011 15.8 1.2 0.013 15.4 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) DUF2800 PF10926.8 NODE_52678_length_338_cov_70.564356_g44754_i0forward_frame_3 - 0.047 12.9 0.2 0.053 12.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2800) MotB_plug PF13677.6 NODE_52676_length_338_cov_72.184818_g44752_i0reverse_frame_2 - 0.37 10.4 3.1 0.57 9.8 1.2 2.1 2 1 1 3 3 3 0 Membrane MotB of proton-channel complex MotA/MotB CCDC32 PF14989.6 NODE_52676_length_338_cov_72.184818_g44752_i0forward_frame_3 - 0.00052 20.0 0.7 0.0006 19.8 0.7 1.1 1 0 0 1 1 1 1 Coiled-coil domain containing 32 DUF3510 PF12022.8 NODE_52676_length_338_cov_72.184818_g44752_i0forward_frame_3 - 0.021 15.2 1.4 0.025 14.9 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3510) FAA_hydro_N_2 PF18288.1 NODE_52676_length_338_cov_72.184818_g44752_i0forward_frame_3 - 0.082 13.3 0.1 0.11 12.9 0.1 1.3 1 0 0 1 1 1 0 Fumarylacetoacetase N-terminal domain 2 AvrLm4-7 PF18661.1 NODE_52676_length_338_cov_72.184818_g44752_i0forward_frame_3 - 0.22 12.6 1.0 0.31 12.1 1.0 1.2 1 0 0 1 1 1 0 Avirulence Effector AvrLm4-7 Stirrup PF09061.6 NODE_52673_length_338_cov_78.046205_g44749_i0reverse_frame_3 - 0.18 12.0 1.4 0.28 11.4 1.4 1.3 1 0 0 1 1 1 0 Stirrup SOBP PF15279.6 NODE_52673_length_338_cov_78.046205_g44749_i0reverse_frame_2 - 5 7.7 7.8 6.2 7.3 7.8 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein EXS PF03124.14 NODE_52672_length_338_cov_83.402640_g44748_i0forward_frame_3 - 6.6e-15 55.3 2.4 7.9e-15 55.0 2.4 1.0 1 0 0 1 1 1 1 EXS family HAD_SAK_1 PF10307.9 NODE_52671_length_338_cov_84.488449_g44747_i0reverse_frame_2 - 0.025 14.4 1.8 0.03 14.1 1.8 1.1 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins DUF2057 PF09829.9 NODE_52665_length_338_cov_96.085809_g44741_i0reverse_frame_3 - 0.08 13.1 1.2 0.11 12.6 1.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) OTT_1508_deam PF14441.6 NODE_52664_length_338_cov_101.283828_g44740_i0forward_frame_3 - 0.028 14.4 3.7 0.045 13.8 3.7 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase HydF_tetramer PF18133.1 NODE_52662_length_338_cov_104.270627_g44738_i0forward_frame_3 - 0.46 10.2 5.9 0.59 9.9 5.9 1.1 1 0 0 1 1 1 0 Hydrogen maturase F tetramerization domain Caskin-Pro-rich PF16907.5 NODE_52661_length_338_cov_105.280528_g44737_i0reverse_frame_3 - 1.7 9.2 6.1 2.8 8.5 6.1 1.3 1 0 0 1 1 1 0 Proline rich region of Caskin proteins RCC1_2 PF13540.6 NODE_52658_length_338_cov_128.785479_g44734_i0reverse_frame_2 - 5.1e-05 22.9 0.5 0.17 11.7 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Ribosomal_L29 PF00831.23 NODE_52658_length_338_cov_128.785479_g44734_i0reverse_frame_2 - 0.0067 16.4 0.3 1.2 9.2 0.0 2.3 2 0 0 2 2 2 2 Ribosomal L29 protein DDE_Tnp_1_3 PF13612.6 NODE_52658_length_338_cov_128.785479_g44734_i0reverse_frame_2 - 0.009 16.0 0.2 0.85 9.6 0.1 2.3 2 0 0 2 2 2 1 Transposase DDE domain Choline_sulf_C PF12411.8 NODE_52658_length_338_cov_128.785479_g44734_i0reverse_frame_2 - 0.044 13.6 0.8 7.3 6.5 0.2 2.2 2 0 0 2 2 2 0 Choline sulfatase enzyme C terminal DUF155 PF02582.14 NODE_52658_length_338_cov_128.785479_g44734_i0reverse_frame_2 - 0.08 13.0 0.1 13 5.9 0.0 2.1 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PIR PF00399.19 NODE_52658_length_338_cov_128.785479_g44734_i0reverse_frame_2 - 0.75 9.4 7.6 6.9 6.4 0.2 2.8 2 0 0 2 2 2 0 Yeast PIR protein repeat FPN1 PF06963.12 NODE_52658_length_338_cov_128.785479_g44734_i0forward_frame_2 - 0.11 11.1 0.2 0.11 11.1 0.2 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) S1FA PF04689.13 NODE_52647_length_338_cov_278.669967_g44723_i0reverse_frame_3 - 0.0093 16.1 3.8 0.014 15.5 3.8 1.3 1 0 0 1 1 1 1 DNA binding protein S1FA YMF19 PF02326.15 NODE_52642_length_338_cov_578.495050_g44719_i0forward_frame_3 - 9.6 7.1 9.3 1.5 9.6 1.0 2.6 2 1 0 2 2 2 0 Plant ATP synthase F0 SpoIIAA-like PF11964.8 NODE_52641_length_338_cov_821.432343_g44718_i0reverse_frame_3 - 0.1 13.7 0.1 0.13 13.3 0.1 1.2 1 0 0 1 1 1 0 SpoIIAA-like zf-C5HC2 PF02928.16 NODE_52640_length_338_cov_992.468647_g44717_i0reverse_frame_3 - 0.00024 21.4 11.2 0.00039 20.8 11.2 1.3 1 0 0 1 1 1 1 C5HC2 zinc finger Thionin PF00321.17 NODE_52640_length_338_cov_992.468647_g44717_i0forward_frame_3 - 0.38 11.3 0.1 0.38 11.3 0.1 2.4 2 1 0 2 2 2 0 Plant thionin NPA PF16469.5 NODE_52636_length_339_cov_1.151316_g44714_i0reverse_frame_3 - 0.031 14.9 0.2 0.04 14.5 0.2 1.1 1 0 0 1 1 1 0 Nematode polyprotein allergen ABA-1 SHIPPO-rpt PF07004.12 NODE_52635_length_339_cov_1.335526_g44713_i0forward_frame_2 - 1.5 9.9 0.2 1.5 9.9 0.2 4.0 4 1 0 4 4 4 0 Sperm-tail PG-rich repeat LNP1 PF15419.6 NODE_52628_length_339_cov_1.506579_g44706_i0reverse_frame_2 - 0.0032 17.7 0.3 0.0037 17.5 0.3 1.1 1 0 0 1 1 1 1 Leukemia NUP98 fusion partner 1 CRM1_repeat_3 PF18787.1 NODE_52620_length_339_cov_1.838816_g44698_i0reverse_frame_3 - 0.023 14.8 0.1 0.063 13.4 0.1 1.7 1 0 0 1 1 1 0 CRM1 / Exportin repeat 3 zf-Sec23_Sec24 PF04810.15 NODE_52620_length_339_cov_1.838816_g44698_i0reverse_frame_2 - 0.031 14.3 0.0 0.05 13.7 0.0 1.4 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger TruD PF01142.18 NODE_52618_length_339_cov_1.937500_g44696_i0reverse_frame_3 - 0.11 11.3 0.1 0.13 11.1 0.1 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) TPR_1 PF00515.28 NODE_52616_length_339_cov_2.049342_g44694_i0forward_frame_3 - 0.0052 16.6 0.2 0.027 14.3 0.1 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_52616_length_339_cov_2.049342_g44694_i0forward_frame_3 - 0.011 15.8 0.1 0.066 13.3 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_52616_length_339_cov_2.049342_g44694_i0forward_frame_3 - 0.014 15.8 0.5 0.1 13.1 0.1 2.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_52616_length_339_cov_2.049342_g44694_i0forward_frame_3 - 0.11 12.6 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TraG_N PF07916.11 NODE_52612_length_339_cov_2.174342_g44690_i0reverse_frame_3 - 0.011 14.6 0.6 0.012 14.5 0.6 1.1 1 0 0 1 1 1 0 TraG-like protein, N-terminal region SSXT PF05030.12 NODE_52612_length_339_cov_2.174342_g44690_i0forward_frame_2 - 0.0088 15.7 0.9 0.012 15.2 0.0 1.6 2 0 0 2 2 2 1 SSXT protein (N-terminal region) Leader_Erm PF08253.11 NODE_52606_length_339_cov_2.480263_g44684_i0forward_frame_3 - 0.083 13.1 0.2 0.18 12.1 0.2 1.6 1 0 0 1 1 1 0 Erm Leader peptide Pep3_Vps18 PF05131.14 NODE_52605_length_339_cov_2.483553_g44683_i0forward_frame_2 - 0.014 15.2 0.1 0.021 14.7 0.1 1.4 1 0 0 1 1 1 0 Pep3/Vps18/deep orange family Jas PF16135.5 NODE_52604_length_339_cov_2.565789_g44682_i0reverse_frame_2 - 0.015 15.4 0.7 0.024 14.8 0.7 1.3 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling Rpr2 PF04032.16 NODE_52604_length_339_cov_2.565789_g44682_i0reverse_frame_2 - 0.015 15.5 0.5 0.017 15.4 0.5 1.2 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zinc_ribbon_4 PF13717.6 NODE_52604_length_339_cov_2.565789_g44682_i0reverse_frame_2 - 0.023 14.6 0.3 0.037 13.9 0.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 NODE_52604_length_339_cov_2.565789_g44682_i0reverse_frame_2 - 0.089 12.6 1.3 0.16 11.8 1.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DUF782 PF05614.11 NODE_52604_length_339_cov_2.565789_g44682_i0forward_frame_2 - 0.021 15.2 0.4 0.027 14.9 0.4 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) Orf78 PF06024.12 NODE_52601_length_339_cov_2.684211_g44679_i0forward_frame_3 - 1.4 9.2 4.0 23 5.4 4.0 2.1 1 1 0 1 1 1 0 Orf78 (ac78) DUF4883 PF16224.5 NODE_52595_length_339_cov_3.322368_g44673_i0reverse_frame_2 - 0.033 14.4 2.2 0.039 14.2 2.2 1.1 1 0 0 1 1 1 0 DOmain of unknown function (DUF4883) DUF4083 PF13314.6 NODE_52595_length_339_cov_3.322368_g44673_i0forward_frame_3 - 0.39 10.7 2.6 1.6 8.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) DUF1139 PF06599.11 NODE_52595_length_339_cov_3.322368_g44673_i0forward_frame_2 - 0.0072 15.8 0.1 0.008 15.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1139) Elong-fact-P_C PF09285.11 NODE_52593_length_339_cov_3.467105_g44671_i0reverse_frame_3 - 5e-19 67.8 0.0 6.2e-19 67.5 0.0 1.1 1 0 0 1 1 1 1 Elongation factor P, C-terminal FAD_binding_1 PF00667.20 NODE_52590_length_339_cov_4.759868_g44668_i0reverse_frame_3 - 0.014 14.9 0.2 0.015 14.9 0.2 1.1 1 0 0 1 1 1 0 FAD binding domain DUF4450 PF14614.6 NODE_52590_length_339_cov_4.759868_g44668_i0reverse_frame_3 - 0.13 11.8 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4450) GTP_EFTU PF00009.27 NODE_52590_length_339_cov_4.759868_g44668_i0forward_frame_3 - 1.5e-05 24.7 0.0 1.8e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Pkinase PF00069.25 NODE_52589_length_339_cov_5.105263_g44667_i0reverse_frame_2 - 4.6e-17 62.3 0.1 6e-17 61.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_52589_length_339_cov_5.105263_g44667_i0reverse_frame_2 - 1.4e-08 34.4 0.0 1.6e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PG_binding_1 PF01471.18 NODE_52577_length_339_cov_57.115132_g44655_i0forward_frame_3 - 0.026 14.8 0.0 5.7 7.2 0.0 2.3 2 0 0 2 2 2 0 Putative peptidoglycan binding domain NumbF PF06311.12 NODE_52571_length_339_cov_61.384868_g44649_i0reverse_frame_3 - 0.021 15.3 0.1 0.026 15.1 0.0 1.3 1 1 0 1 1 1 0 NUMB domain Lipoprotein_3 PF00938.17 NODE_52570_length_339_cov_61.467105_g44648_i0forward_frame_2 - 0.063 13.5 0.3 0.092 12.9 0.3 1.3 1 0 0 1 1 1 0 Lipoprotein CDT1_C PF16679.5 NODE_52563_length_339_cov_73.039474_g44641_i0reverse_frame_3 - 0.026 15.0 0.2 0.094 13.2 0.0 1.8 1 1 1 2 2 2 0 DNA replication factor Cdt1 C-terminal domain DUF2737 PF10930.8 NODE_52562_length_339_cov_74.108553_g44640_i0reverse_frame_3 - 0.038 13.6 1.0 0.065 12.8 0.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2737) Apolipoprotein PF01442.18 NODE_52558_length_339_cov_77.223684_g44636_i0reverse_frame_2 - 0.2 11.5 0.1 0.3 11.0 0.1 1.2 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain PCM1_C PF15717.5 NODE_52557_length_339_cov_77.434211_g44635_i0forward_frame_2 - 0.46 9.1 0.4 0.52 8.9 0.4 1.0 1 0 0 1 1 1 0 Pericentriolar material 1 C terminus Adeno_GP19K PF04881.13 NODE_52557_length_339_cov_77.434211_g44635_i0forward_frame_2 - 0.74 9.8 4.6 0.51 10.3 3.3 1.4 1 1 0 1 1 1 0 Adenovirus GP19K Phage_holin_2_1 PF04971.12 NODE_52554_length_339_cov_80.351974_g44632_i0reverse_frame_2 - 0.2 11.7 3.0 0.35 10.9 3.0 1.4 1 0 0 1 1 1 0 Bacteriophage P21 holin S Arginase PF00491.21 NODE_52550_length_339_cov_88.062500_g44628_i0reverse_frame_3 - 0.0048 16.4 0.0 0.0065 16.0 0.0 1.1 1 0 0 1 1 1 1 Arginase family BAR_3 PF16746.5 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 7.3e-05 22.6 8.8 0.00034 20.4 8.8 1.8 1 1 0 1 1 1 1 BAR domain of APPL family DUF1840 PF08895.11 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 0.13 12.6 5.3 0.19 12.1 5.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) SNAP-25 PF00835.19 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 0.19 12.1 12.8 3.5 8.0 0.8 3.2 1 1 2 3 3 3 0 SNAP-25 family Wbp11 PF09429.10 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 0.21 12.0 6.4 3.1 8.2 1.0 2.2 1 1 1 2 2 2 0 WW domain binding protein 11 Snapin_Pallidin PF14712.6 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 0.91 10.0 15.4 0.25 11.8 7.2 2.1 1 1 1 2 2 2 0 Snapin/Pallidin DUF3450 PF11932.8 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 1.6 8.0 12.7 1.2 8.4 11.5 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF4962 PF16332.5 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 1.7 7.0 6.3 1.9 6.9 6.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4962) Nrap_D6 PF17407.2 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 3.1 8.0 7.2 3.1 8.0 0.2 2.7 1 1 1 2 2 2 0 Nrap protein domain 6 DUF4400 PF14348.6 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 5 6.6 4.9 6 6.3 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) VPS11_C PF12451.8 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 5.3 7.3 10.6 24 5.3 0.2 3.6 3 1 0 3 3 3 0 Vacuolar protein sorting protein 11 C terminal zf-MYND PF01753.18 NODE_52544_length_339_cov_98.016447_g44622_i0forward_frame_3 - 0.11 12.6 3.2 0.19 11.9 3.2 1.3 1 0 0 1 1 1 0 MYND finger Pigment_DH PF06324.11 NODE_52542_length_339_cov_102.365132_g44620_i0reverse_frame_3 - 0.12 12.5 2.0 0.21 11.8 0.6 2.3 2 0 0 2 2 2 0 Pigment-dispersing hormone (PDH) Babuvirus_MP PF07234.11 NODE_52542_length_339_cov_102.365132_g44620_i0reverse_frame_2 - 2.9 8.1 5.4 3.7 7.7 5.4 1.2 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF222 PF02720.17 NODE_52540_length_339_cov_118.990132_g44618_i0reverse_frame_3 - 0.054 13.0 0.0 0.056 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF222) YCII PF03795.14 NODE_52537_length_339_cov_138.523026_g44615_i0reverse_frame_2 - 2.5e-08 34.2 0.0 3.3e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 YCII-related domain PSI PF01437.25 NODE_52536_length_339_cov_139.213816_g44614_i0forward_frame_3 - 0.0077 16.7 2.1 2.1 9.0 0.2 2.1 2 0 0 2 2 2 2 Plexin repeat zf-met PF12874.7 NODE_52527_length_339_cov_17932.516447_g44606_i0forward_frame_3 - 0.25 11.8 2.1 10 6.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Peptidase_C65 PF10275.9 NODE_52526_length_339_cov_17932.542763_g44605_i0reverse_frame_3 - 0.025 14.0 1.0 0.032 13.7 1.0 1.1 1 0 0 1 1 1 0 Peptidase C65 Otubain zf-met PF12874.7 NODE_52526_length_339_cov_17932.542763_g44605_i0forward_frame_3 - 0.24 11.8 2.1 10 6.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type GST_C PF00043.25 NODE_52525_length_339_cov_17932.611842_g44604_i0reverse_frame_3 - 2.2 8.5 6.3 0.77 10.0 0.4 2.1 1 1 1 2 2 2 0 Glutathione S-transferase, C-terminal domain zf-met PF12874.7 NODE_52525_length_339_cov_17932.611842_g44604_i0forward_frame_3 - 0.23 11.9 2.1 10 6.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type UxuA PF03786.13 ORF99195 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF99195 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF99195 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Tmpp129 PF10272.9 ORF98812 - 0.16 11.2 0.5 0.15 11.3 0.5 1.2 1 0 0 1 1 1 0 Putative transmembrane protein precursor FKBP_C PF00254.28 ORF98519 - 2.5e-15 56.6 0.0 3.1e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF4020 PF13212.6 ORF9833 - 0.04 13.7 0.2 0.058 13.2 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4020) ATP-sulfurylase PF01747.17 ORF9833 - 0.084 12.3 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 ATP-sulfurylase Pkinase PF00069.25 ORF98 - 3.6e-22 79.0 0.0 4e-22 78.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF98 - 1.1e-11 44.5 0.0 1.3e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PTPLA PF04387.14 ORF97936 - 1.9e-20 73.3 2.9 2e-20 73.1 2.9 1.0 1 0 0 1 1 1 1 Protein tyrosine phosphatase-like protein, PTPLA UxuA PF03786.13 ORF97861 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF97861 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF97861 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein FlgT_N PF16548.5 ORF97748 - 0.13 12.9 0.4 0.28 11.7 0.1 1.7 2 0 0 2 2 2 0 Flagellar assembly protein T, N-terminal domain Ank_2 PF12796.7 ORF97689 - 5.7e-14 52.5 0.0 8.1e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF97689 - 2.4e-11 43.7 0.3 1.1e-06 28.8 0.1 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF97689 - 1e-08 35.5 0.0 5.1e-07 30.1 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF97689 - 3.4e-08 33.6 0.0 0.00043 20.6 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF97689 - 1e-06 28.6 0.0 0.13 12.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Rsd_AlgQ PF04353.13 ORF96710 - 1.7e-33 115.7 0.5 1.8e-33 115.6 0.5 1.0 1 0 0 1 1 1 1 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ pKID PF02173.17 ORF96515 - 0.35 10.4 3.1 15 5.1 0.4 2.5 2 0 0 2 2 2 0 pKID domain DUF910 PF06014.11 ORF9651 - 0.028 14.4 0.3 0.11 12.6 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF910) Tetraspanin PF00335.20 ORF96430 - 0.005 16.6 0.3 0.0051 16.5 0.3 1.1 1 0 0 1 1 1 1 Tetraspanin family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks209.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks209.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks209.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks209.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Hexapep PF00132.24 ORF38730 - 0.4 10.5 3.1 7.1 6.5 0.3 3.8 4 1 0 4 4 4 0 Bacterial transferase hexapeptide (six repeats) RRM_1 PF00076.22 ORF34140 - 3.3e-30 103.7 0.0 6.6e-12 45.1 0.0 3.4 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Peptidase_S10 PF00450.22 ORF27184 - 1.6e-105 353.9 3.2 2e-105 353.6 3.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Pro_sub2 PF18513.1 ORF26405 - 0.073 13.3 0.6 0.073 13.3 0.6 3.7 5 0 0 5 5 5 0 Prodomain subtilisin 2 DUF4407 PF14362.6 ORF26405 - 0.56 9.5 39.8 0.15 11.4 21.6 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Col_cuticle_N PF01484.17 ORF26405 - 4.5 7.4 6.8 23 5.2 0.1 3.8 3 1 1 4 4 4 0 Nematode cuticle collagen N-terminal domain V-ATPase_H_N PF03224.14 ORF26374 - 9.3e-34 117.1 7.8 9.3e-34 117.1 7.8 1.7 2 0 0 2 2 2 1 V-ATPase subunit H V-ATPase_H_C PF11698.8 ORF26374 - 6e-28 97.3 0.5 6e-28 97.3 0.5 3.2 3 1 0 3 3 3 1 V-ATPase subunit H DUF3361 PF11841.8 ORF26374 - 0.002 18.1 5.9 0.51 10.3 0.1 3.0 3 0 0 3 3 3 2 Domain of unknown function (DUF3361) Arm PF00514.23 ORF26374 - 0.021 14.9 0.2 49 4.2 0.0 3.7 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat IBN_N PF03810.19 ORF26374 - 0.27 11.2 2.6 5.1 7.1 0.1 3.4 3 1 1 4 4 4 0 Importin-beta N-terminal domain RTTN_N PF14726.6 ORF26374 - 0.45 11.4 3.9 1.7 9.5 1.2 2.8 2 0 0 2 2 2 0 Rotatin, an armadillo repeat protein, centriole functioning Peptidase_S10 PF00450.22 ORF24315 - 1.6e-105 353.9 3.2 2e-105 353.6 3.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase zf-RanBP PF00641.18 ORF2125 - 3.2 7.2 9.7 6.7 6.1 2.3 2.4 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Peptidase_S10 PF00450.22 ORF19296 - 2.8e-105 353.1 3.6 3.3e-105 352.9 3.6 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Voltage_CLC PF00654.20 ORF17685 - 5.6e-29 101.5 8.8 6.8e-29 101.2 8.8 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel CBS PF00571.28 ORF17685 - 4e-07 30.4 0.1 0.012 16.0 0.0 2.6 2 0 0 2 2 2 2 CBS domain PGM_PMM_I PF02878.16 ORF1294 - 1.4e-32 112.3 0.0 6.9e-32 110.0 0.0 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 ORF1294 - 1.9e-25 89.3 0.0 2.9e-25 88.7 0.0 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 ORF1294 - 2.3e-22 79.6 0.1 4.3e-22 78.7 0.1 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 ORF1294 - 5e-09 36.2 0.1 1.2e-08 35.0 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Asp PF00026.23 ORF101813 - 7.8e-34 117.5 5.2 1.8e-33 116.3 5.2 1.5 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF101813 - 2.7e-06 27.7 0.4 7.3e-06 26.3 0.2 1.8 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal Inositol_P PF00459.25 ORF97914 - 2e-19 70.1 0.0 4.2e-19 69.1 0.0 1.5 1 1 0 1 1 1 1 Inositol monophosphatase family GatB_Yqey PF02637.18 ORF97914 - 0.1 12.4 0.3 0.2 11.6 0.3 1.4 1 0 0 1 1 1 0 GatB domain DNA_pol_E_B PF04042.16 ORF90159 - 1e-37 129.5 0.0 1.4e-37 129.1 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B G_glu_transpept PF01019.21 ORF87891 - 7.5e-91 305.4 0.1 9.1e-91 305.1 0.1 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase Na_H_Exchanger PF00999.21 ORF86589 - 3.1e-53 180.9 37.2 4e-53 180.6 37.2 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 ORF86589 - 1.6e-25 89.6 0.3 2.8e-25 88.9 0.3 1.4 1 0 0 1 1 1 1 TrkA-N domain ApbA PF02558.16 ORF86589 - 0.012 15.3 0.0 0.028 14.1 0.0 1.6 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA B12-binding_2 PF02607.17 ORF86589 - 0.058 13.8 1.2 0.093 13.2 0.0 2.0 2 0 0 2 2 2 0 B12 binding domain NAD_binding_2 PF03446.15 ORF86589 - 0.068 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase APH PF01636.23 ORF81060 - 0.25 11.2 1.5 0.36 10.7 1.5 1.4 1 1 0 1 1 1 0 Phosphotransferase enzyme family TctB PF07331.11 ORF66034 - 0.066 13.5 0.2 0.066 13.5 0.2 3.6 2 1 1 3 3 3 0 Tripartite tricarboxylate transporter TctB family OST3_OST6 PF04756.13 ORF66034 - 3.3 7.0 6.7 0.37 10.1 1.8 1.8 2 0 0 2 2 2 0 OST3 / OST6 family, transporter family DUF2721 PF11026.8 ORF66034 - 4.7 7.1 17.5 0.28 11.1 0.6 4.5 5 0 0 5 5 5 0 Protein of unknown function (DUF2721) TIP49 PF06068.13 ORF65978 - 1.5e-167 557.2 0.8 1.9e-167 556.8 0.8 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain TIP49_C PF17856.1 ORF65978 - 2.1e-24 85.5 0.3 5.7e-24 84.0 0.3 1.8 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 ORF65978 - 2.7e-11 44.0 0.2 1.3e-07 32.1 0.1 2.9 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 ORF65978 - 6.7e-10 38.9 0.4 2.8e-06 27.2 0.1 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF65978 - 1.2e-05 25.6 0.3 0.058 13.7 0.3 2.8 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF65978 - 0.00013 22.0 0.1 0.043 13.8 0.0 2.7 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 ORF65978 - 0.00035 20.9 0.6 0.27 11.5 0.2 2.4 2 0 0 2 2 2 2 AAA domain DnaB_C PF03796.15 ORF65978 - 0.0006 19.2 0.0 0.0016 17.8 0.0 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain Mg_chelatase PF01078.21 ORF65978 - 0.00075 18.9 0.2 0.046 13.1 0.1 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 ORF65978 - 0.00089 19.7 0.0 0.011 16.1 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain Sigma54_activat PF00158.26 ORF65978 - 0.0013 18.4 0.1 1.4 8.6 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_28 PF13521.6 ORF65978 - 0.0018 18.5 0.0 0.004 17.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 ORF65978 - 0.0032 16.8 0.3 0.0084 15.4 0.2 1.7 2 0 0 2 2 2 1 Zeta toxin ResIII PF04851.15 ORF65978 - 0.0036 17.3 0.8 0.18 11.8 0.0 2.6 3 0 0 3 3 2 1 Type III restriction enzyme, res subunit AAA_17 PF13207.6 ORF65978 - 0.0037 17.7 0.1 0.2 12.1 0.0 3.0 2 1 0 3 3 3 1 AAA domain AAA_25 PF13481.6 ORF65978 - 0.0065 16.1 0.1 0.012 15.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF65978 - 0.011 16.2 0.0 0.032 14.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF65978 - 0.015 15.3 0.0 3.4 7.7 0.0 2.6 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.9 ORF65978 - 0.016 14.5 0.0 0.039 13.2 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) IstB_IS21 PF01695.17 ORF65978 - 0.041 13.6 0.4 0.096 12.4 0.1 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF65978 - 0.06 12.8 0.2 0.25 10.9 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region TsaE PF02367.17 ORF65978 - 0.12 12.4 0.0 0.32 11.0 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Trypsin_2 PF13365.6 ORF55336 - 6.6e-30 105.0 0.1 1.1e-29 104.3 0.1 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ PF00595.24 ORF55336 - 1.1e-29 102.6 7.5 1.6e-15 57.2 0.0 3.3 3 0 0 3 3 3 2 PDZ domain PDZ_2 PF13180.6 ORF55336 - 1.8e-28 98.7 0.4 2.8e-17 62.8 0.0 2.6 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF55336 - 6.5e-20 70.7 8.1 8.2e-10 38.4 0.0 3.2 4 0 0 4 4 4 2 PDZ domain Trypsin PF00089.26 ORF55336 - 2.9e-16 60.0 0.0 4.8e-16 59.2 0.0 1.2 1 0 0 1 1 1 1 Trypsin Tricorn_PDZ PF14685.6 ORF55336 - 0.00014 21.8 0.4 0.14 12.1 0.0 2.9 2 0 0 2 2 2 2 Tricorn protease PDZ domain DUF3394 PF11874.8 ORF55336 - 0.0029 17.3 0.0 0.012 15.3 0.0 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF3394) GRASP55_65 PF04495.14 ORF55336 - 0.0036 17.6 0.0 0.029 14.7 0.0 2.1 1 1 1 2 2 2 1 GRASP55/65 PDZ-like domain Peptidase_S46 PF10459.9 ORF55336 - 0.009 14.7 0.2 0.19 10.3 0.7 2.0 2 0 0 2 2 2 1 Peptidase S46 PDZ_1 PF12812.7 ORF55336 - 0.018 15.0 0.0 0.25 11.4 0.0 2.4 2 0 0 2 2 2 0 PDZ-like domain Complex1_51K PF01512.17 ORF55336 - 0.11 12.4 0.0 0.7 9.8 0.1 2.1 2 0 0 2 2 2 0 Respiratory-chain NADH dehydrogenase 51 Kd subunit LSM PF01423.22 ORF55336 - 0.12 12.1 0.0 0.3 10.8 0.0 1.6 1 0 0 1 1 1 0 LSM domain Inositol_P PF00459.25 ORF53713 - 2e-19 70.1 0.0 4.2e-19 69.1 0.0 1.5 1 1 0 1 1 1 1 Inositol monophosphatase family GatB_Yqey PF02637.18 ORF53713 - 0.1 12.4 0.3 0.2 11.6 0.3 1.4 1 0 0 1 1 1 0 GatB domain Myb_DNA-binding PF00249.31 ORF47641 - 1.5e-16 60.3 0.1 4.5e-09 36.4 0.0 2.5 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF47641 - 1.2e-09 38.3 0.3 4.1e-05 23.7 0.0 3.0 2 1 1 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF47641 - 0.026 14.4 0.0 0.026 14.4 0.0 2.5 2 1 0 2 2 2 0 Myb DNA-binding like La PF05383.17 ORF41482 - 2.3e-15 56.4 0.1 3.9e-15 55.6 0.1 1.4 1 0 0 1 1 1 1 La domain Torus PF16131.5 ORF41482 - 6.2e-05 23.6 0.1 0.00017 22.3 0.1 1.7 2 0 0 2 2 2 1 Torus domain RNase_T PF00929.24 ORF41482 - 9.4e-05 23.0 0.0 0.00079 20.0 0.0 2.0 1 1 0 1 1 1 1 Exonuclease zf-CCCH PF00642.24 ORF41482 - 0.017 15.0 1.7 0.035 14.0 1.7 1.6 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF41482 - 0.068 13.2 3.1 0.15 12.2 3.1 1.6 1 0 0 1 1 1 0 Zinc finger domain Kinesin PF00225.23 ORF22217 - 4.5e-76 255.9 0.1 6.1e-76 255.5 0.1 1.2 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF22217 - 0.00039 20.4 0.2 0.0015 18.5 0.0 2.0 2 0 0 2 2 2 1 Microtubule binding YabA PF06156.13 ORF22217 - 0.14 12.8 7.5 0.22 12.2 0.7 3.5 4 0 0 4 4 4 0 Initiation control protein YabA DivIC PF04977.15 ORF22217 - 0.85 9.4 4.1 0.37 10.6 0.4 2.2 2 0 0 2 2 2 0 Septum formation initiator TLE_N PF03920.15 ORF22217 - 1.1 9.3 5.6 0.91 9.6 0.3 2.2 2 0 0 2 2 2 0 Groucho/TLE N-terminal Q-rich domain TSC22 PF01166.18 ORF22217 - 2.6 8.4 5.4 10 6.5 1.9 3.2 3 0 0 3 3 3 0 TSC-22/dip/bun family ZapB PF06005.12 ORF22217 - 2.6 8.6 7.2 0.69 10.4 0.8 2.8 3 0 0 3 3 3 0 Cell division protein ZapB PikAIV_N PF18605.1 ORF22217 - 3.9 7.1 4.5 2.1 8.0 1.4 2.2 2 0 0 2 2 2 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain bZIP_1 PF00170.21 ORF22217 - 4.2 7.6 5.6 14 5.9 2.2 3.0 2 0 0 2 2 2 0 bZIP transcription factor SDH_alpha PF03313.15 ORF18115 - 1.3e-95 320.0 10.1 1.7e-95 319.6 10.1 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain SDH_beta PF03315.15 ORF18115 - 2.2e-56 190.6 0.1 4.7e-56 189.5 0.1 1.6 1 0 0 1 1 1 1 Serine dehydratase beta chain MmgE_PrpD PF03972.14 ORF18115 - 0.029 12.9 3.2 0.047 12.2 3.2 1.3 1 0 0 1 1 1 0 MmgE/PrpD family CT_C_D PF02682.16 ORF18115 - 0.063 13.0 0.0 0.98 9.1 0.0 2.6 1 1 1 2 2 2 0 Carboxyltransferase domain, subdomain C and D SAP PF02037.27 ORF18115 - 0.067 13.0 0.1 0.22 11.3 0.0 1.9 2 0 0 2 2 2 0 SAP domain DOCK-C2 PF14429.6 ORF104061 - 0.00043 20.1 0.0 0.35 10.7 0.0 2.3 2 0 0 2 2 2 2 C2 domain in Dock180 and Zizimin proteins Gp45_2 PF17470.2 NODE_10220_length_1362_cov_3.035418_g7546_i0forward_frame_1 - 0.19 11.7 0.0 0.38 10.7 0.0 1.4 1 0 0 1 1 1 0 Phage gene product 45.2 VraX PF17412.2 NODE_10194_length_1363_cov_272.951054_g3293_i4reverse_frame_3 - 0.018 14.6 0.1 0.051 13.2 0.1 1.7 1 0 0 1 1 1 0 Family of unknown function DUF3989 PF13150.6 NODE_10194_length_1363_cov_272.951054_g3293_i4reverse_frame_2 - 4.4 7.1 7.1 0.64 9.8 1.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) IBR PF01485.21 NODE_10177_length_1364_cov_208.434161_g7510_i0reverse_frame_2 - 0.00019 21.6 5.0 0.00019 21.6 5.0 3.8 3 1 0 3 3 3 2 IBR domain, a half RING-finger domain RNA_helicase PF00910.22 NODE_10177_length_1364_cov_208.434161_g7510_i0reverse_frame_2 - 0.035 14.5 0.0 0.14 12.5 0.0 2.1 1 0 0 1 1 1 0 RNA helicase HypA PF01155.19 NODE_10177_length_1364_cov_208.434161_g7510_i0reverse_frame_2 - 0.049 13.7 3.7 0.41 10.7 0.2 2.6 1 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3397 PF11877.8 NODE_10177_length_1364_cov_208.434161_g7510_i0forward_frame_2 - 8.1 6.7 30.4 0.82 9.9 15.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3397) TPR_1 PF00515.28 NODE_10158_length_1365_cov_60.438346_g7497_i0forward_frame_2 - 3.7e-11 42.3 5.2 0.027 14.3 0.1 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_10158_length_1365_cov_60.438346_g7497_i0forward_frame_2 - 1.3e-10 40.6 4.1 0.00098 19.2 0.0 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_10158_length_1365_cov_60.438346_g7497_i0forward_frame_2 - 5.2e-09 35.5 2.5 0.065 13.4 0.0 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_10158_length_1365_cov_60.438346_g7497_i0forward_frame_2 - 2.9e-06 27.5 1.0 0.1 12.9 0.4 2.5 1 1 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_10158_length_1365_cov_60.438346_g7497_i0forward_frame_2 - 0.0041 17.6 0.0 4.7 7.8 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_10158_length_1365_cov_60.438346_g7497_i0forward_frame_2 - 0.006 16.5 0.4 0.068 13.2 0.4 2.6 2 1 0 2 2 2 1 Tetratricopeptide repeat SNAP PF14938.6 NODE_10158_length_1365_cov_60.438346_g7497_i0forward_frame_2 - 0.029 13.8 0.6 0.077 12.4 0.5 1.6 1 1 1 2 2 2 0 Soluble NSF attachment protein, SNAP TPR_14 PF13428.6 NODE_10158_length_1365_cov_60.438346_g7497_i0forward_frame_2 - 0.032 15.0 0.0 1.3 10.0 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_10158_length_1365_cov_60.438346_g7497_i0forward_frame_2 - 0.11 12.6 0.0 0.92 9.7 0.0 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat Helicase_C PF00271.31 ORF92072 - 1.4e-05 25.4 0.0 2.8e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Snapin_Pallidin PF14712.6 ORF92072 - 0.00085 19.7 2.0 0.0024 18.3 2.0 1.7 1 0 0 1 1 1 1 Snapin/Pallidin OmpH PF03938.14 ORF92072 - 0.018 15.3 5.1 0.018 15.3 5.1 2.3 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) ApoLp-III PF07464.11 ORF92072 - 0.022 14.9 4.6 0.3 11.2 3.1 2.9 2 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Cytochrom_B562 PF07361.11 ORF92072 - 0.12 13.0 2.6 0.34 11.6 2.1 2.1 1 1 0 1 1 1 0 Cytochrome b562 Lebercilin PF15619.6 ORF92072 - 0.4 10.3 6.4 2.9 7.5 6.6 2.2 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease DUF4200 PF13863.6 ORF92072 - 2.3 8.6 12.0 0.037 14.4 3.8 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) ubiquitin PF00240.23 ORF89146 - 1.2e-07 31.4 0.0 3.6e-07 29.8 0.0 1.8 2 0 0 2 2 2 1 Ubiquitin family Asp PF00026.23 ORF88011 - 2.7e-41 142.0 4.8 3.3e-41 141.7 4.8 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF88011 - 1.6e-05 25.3 0.3 5.3e-05 23.5 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal MFS_1 PF07690.16 ORF84089 - 2.9e-34 118.5 35.3 1.8e-23 83.1 9.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF84089 - 3.9e-09 35.9 24.1 0.00017 20.6 6.7 2.1 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 ORF84089 - 2.8e-07 29.8 11.8 6.5e-05 22.0 1.4 2.2 1 1 1 2 2 2 2 MFS_1 like family MFS_4 PF06779.14 ORF84089 - 3e-05 23.5 28.8 4.7e-05 22.8 28.8 1.2 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB PUCC PF03209.15 ORF84089 - 0.0024 17.0 11.8 0.0024 17.0 11.8 1.5 1 1 0 1 1 1 1 PUCC protein DUF3318 PF11780.8 ORF84089 - 0.048 13.6 0.1 0.19 11.7 0.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3318) ATG22 PF11700.8 ORF84089 - 0.1 11.2 7.5 0.079 11.6 1.5 2.4 2 0 0 2 2 2 0 Vacuole effluxer Atg22 like PAP2 PF01569.21 ORF68754 - 1.4e-16 60.5 5.1 1.9e-16 60.1 3.3 2.2 2 0 0 2 2 2 1 PAP2 superfamily Sortilin-Vps10 PF15902.5 ORF62373 - 2e-83 280.7 1.9 2.4e-83 280.4 1.9 1.0 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, Sortilin_C PF15901.5 ORF62373 - 2.5e-06 28.0 0.0 3.9e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal BNR PF02012.20 ORF62373 - 0.014 15.3 10.9 10 6.6 0.4 5.0 4 0 0 4 4 4 0 BNR/Asp-box repeat Abhydrolase_1 PF00561.20 ORF60535 - 4.7e-18 65.8 0.0 7.4e-18 65.1 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF60535 - 0.00014 22.6 0.1 0.00021 22.0 0.1 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 ORF60535 - 0.00054 19.7 0.0 0.00072 19.3 0.0 1.3 1 1 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 ORF60535 - 0.082 12.2 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 MnmE_helical PF12631.7 ORF48570 - 3.8e-61 206.8 1.9 4.6e-61 206.6 1.9 1.1 1 0 0 1 1 1 1 MnmE helical domain TrmE_N PF10396.9 ORF48570 - 1.9e-35 121.6 0.0 7.3e-35 119.8 0.0 2.0 2 0 0 2 2 2 1 GTP-binding protein TrmE N-terminus MMR_HSR1 PF01926.23 ORF48570 - 1.1e-25 90.0 0.0 8.1e-25 87.1 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF48570 - 2.2e-08 33.8 0.0 8.6e-08 31.9 0.0 1.9 1 1 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF48570 - 7e-05 22.9 0.0 0.00073 19.6 0.0 2.2 1 1 1 2 2 2 1 Dynamin family Ras PF00071.22 ORF48570 - 0.00014 21.5 0.0 0.00025 20.7 0.0 1.4 1 0 0 1 1 1 1 Ras family RsgA_GTPase PF03193.16 ORF48570 - 0.00019 21.4 0.0 0.0064 16.4 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase AIG1 PF04548.16 ORF48570 - 0.00032 20.1 0.0 0.00058 19.3 0.0 1.4 1 0 0 1 1 1 1 AIG1 family ABC_tran PF00005.27 ORF48570 - 0.0011 19.5 0.0 0.0023 18.5 0.0 1.6 1 0 0 1 1 1 1 ABC transporter Roc PF08477.13 ORF48570 - 0.0016 18.6 0.0 0.0039 17.4 0.0 1.6 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA_28 PF13521.6 ORF48570 - 0.0047 17.2 0.1 0.011 16.0 0.1 1.6 1 0 0 1 1 1 1 AAA domain Arf PF00025.21 ORF48570 - 0.0071 15.8 0.0 0.016 14.6 0.0 1.6 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF48570 - 0.033 13.6 0.0 0.061 12.8 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF48570 - 0.039 13.3 0.0 0.09 12.1 0.0 1.6 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF48570 - 0.14 11.7 0.0 4.8 6.7 0.0 2.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain TMEM131_like PF12371.8 ORF47143 - 2.2e-05 24.6 1.7 0.64 10.3 0.0 3.7 4 0 0 4 4 4 2 Transmembrane protein 131-like ASH PF15780.5 ORF47143 - 2.7e-05 24.3 0.6 0.43 10.8 0.0 4.3 4 0 0 4 4 4 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin mTERF PF02536.14 ORF44602 - 5.4e-44 150.4 0.0 1.9e-25 89.4 0.0 2.1 1 1 1 2 2 2 2 mTERF TAL_effector PF03377.13 ORF44602 - 7.6e-05 22.9 0.1 24 5.3 0.0 5.1 5 0 0 5 5 5 2 TAL effector repeat ERbeta_N PF12497.8 ORF44602 - 0.0061 16.3 0.0 19 5.1 0.0 4.5 6 0 0 6 6 6 1 Estrogen receptor beta PI_PP_I PF18363.1 ORF44602 - 0.053 13.7 0.0 4 7.7 0.0 3.4 3 1 0 3 3 3 0 Phosphoinositide phosphatase insertion domain DUF760 PF05542.11 ORF44602 - 0.13 12.6 0.3 23 5.5 0.1 3.8 3 1 0 3 3 3 0 Protein of unknown function (DUF760) Aminotran_3 PF00202.21 ORF42855 - 6.3e-122 407.1 0.0 7.8e-122 406.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III PKD_channel PF08016.12 ORF39338 - 2.2e-22 79.4 20.9 2.8e-22 79.0 20.9 1.1 1 0 0 1 1 1 1 Polycystin cation channel DVL PF08137.12 ORF39338 - 0.58 10.1 4.1 1.9 8.4 4.1 2.0 1 0 0 1 1 1 0 DVL family RAP PF08373.10 ORF38209 - 7.6e-10 38.7 0.0 1.4e-09 37.9 0.0 1.5 1 0 0 1 1 1 1 RAP domain PRiA4_ORF3 PF07929.11 ORF38209 - 0.057 13.1 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Plasmid pRiA4b ORF-3-like protein EF-hand_7 PF13499.6 ORF36044 - 0.036 14.5 0.7 5 7.7 0.1 2.7 2 0 0 2 2 2 0 EF-hand domain pair DUF3017 PF11222.8 ORF36044 - 0.14 12.4 0.0 0.3 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3017) FlgM PF04316.13 ORF36044 - 0.17 12.3 0.1 0.38 11.1 0.1 1.5 1 0 0 1 1 1 0 Anti-sigma-28 factor, FlgM SDH_alpha PF03313.15 ORF30953 - 2.7e-98 328.8 5.1 3.4e-98 328.5 5.1 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain SDH_beta PF03315.15 ORF30953 - 3.3e-54 183.5 0.1 5.2e-54 182.8 0.1 1.3 1 0 0 1 1 1 1 Serine dehydratase beta chain MmgE_PrpD PF03972.14 ORF30953 - 0.0004 19.0 1.1 0.00055 18.6 1.1 1.1 1 0 0 1 1 1 1 MmgE/PrpD family Sulfatase PF00884.23 ORF30270 - 1.6e-20 73.7 0.0 2.4e-20 73.2 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 ORF30270 - 0.00036 21.3 0.2 0.0011 19.7 0.0 1.8 2 0 0 2 2 2 1 C-terminal region of aryl-sulfatase DUF1501 PF07394.12 ORF30270 - 0.0022 17.1 0.0 0.0037 16.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1501) DUF4976 PF16347.5 ORF30270 - 0.016 15.4 0.2 0.047 13.9 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4976) Phosphodiest PF01663.22 ORF30270 - 0.057 13.0 0.0 0.1 12.1 0.0 1.4 2 0 0 2 2 2 0 Type I phosphodiesterase / nucleotide pyrophosphatase RRM_1 PF00076.22 ORF28522 - 2.3e-09 37.0 0.0 5.1e-09 35.8 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Med26 PF08711.11 ORF28522 - 0.0007 19.6 0.2 0.0019 18.2 0.2 1.8 1 0 0 1 1 1 1 TFIIS helical bundle-like domain DUF349 PF03993.12 ORF28522 - 0.0093 16.2 0.5 0.035 14.4 0.5 1.9 1 0 0 1 1 1 1 Domain of Unknown Function (DUF349) Secretin_N PF03958.17 ORF28522 - 0.011 16.1 0.0 0.13 12.7 0.0 2.4 2 1 0 2 2 2 0 Bacterial type II/III secretion system short domain DUF5403 PF17395.2 ORF28522 - 0.094 13.0 0.5 10 6.5 0.3 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5403) Aldedh PF00171.22 ORF23378 - 1.2e-76 258.2 0.0 1.4e-76 257.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 ORF23378 - 8.3e-06 25.1 0.0 1.2e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) Phosphorylase PF00343.20 ORF17534 - 3.5e-203 676.8 0.1 4e-203 676.6 0.1 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase SAM_1 PF00536.30 ORF15266 - 1.3e-09 38.3 0.0 2.1e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 ORF15266 - 8.7e-09 35.4 0.1 1.7e-08 34.5 0.1 1.4 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_PNT PF02198.16 ORF15266 - 0.036 14.0 0.0 0.075 13.0 0.0 1.5 1 1 0 1 1 1 0 Sterile alpha motif (SAM)/Pointed domain Peptidase_S28 PF05577.12 ORF13158 - 4.9e-78 262.9 3.5 2.1e-77 260.8 3.5 1.7 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF13158 - 0.0023 17.4 0.1 0.0038 16.7 0.1 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF13158 - 0.088 12.4 0.0 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 alpha/beta hydrolase fold Asp PF00026.23 ORF11428 - 2.7e-41 142.0 4.8 3.3e-41 141.7 4.8 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF11428 - 1.6e-05 25.3 0.3 5.3e-05 23.5 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal LRR_9 PF14580.6 ORF104850 - 8.9e-23 80.7 8.8 3.9e-14 52.5 3.3 2.4 2 0 0 2 2 2 2 Leucine-rich repeat LRR_4 PF12799.7 ORF104850 - 3.7e-18 65.3 31.6 7.4e-06 26.2 2.4 6.0 4 1 3 7 7 7 5 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF104850 - 5.2e-16 58.2 24.4 4.2e-05 23.2 8.1 6.3 5 1 1 7 7 7 4 Leucine rich repeat LRR_5 PF13306.6 ORF104850 - 0.24 11.4 13.7 0.067 13.2 2.0 3.0 2 1 0 2 2 2 0 BspA type Leucine rich repeat region (6 copies) LRR_6 PF13516.6 ORF104850 - 0.85 9.8 14.3 2.3 8.5 0.5 5.3 5 0 0 5 5 5 0 Leucine Rich repeat DXP_synthase_N PF13292.6 ORF104850 - 3.4 6.8 6.9 0.28 10.4 0.2 2.5 3 1 0 3 3 3 0 1-deoxy-D-xylulose-5-phosphate synthase RNase_T PF00929.24 NODE_10220_length_1362_cov_3.035418_g7546_i0reverse_frame_3 - 4.8e-21 76.0 0.0 7.4e-21 75.4 0.0 1.2 1 0 0 1 1 1 1 Exonuclease Peptidase_S11 PF00768.20 NODE_10220_length_1362_cov_3.035418_g7546_i0forward_frame_3 - 8.8e-95 316.7 0.0 1.3e-94 316.2 0.0 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 NODE_10220_length_1362_cov_3.035418_g7546_i0forward_frame_3 - 4.5e-10 39.5 0.0 6.1e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase enzyme family SH3_3 PF08239.11 ORF98426 - 8.6e-07 29.1 0.0 0.072 13.4 0.0 3.4 3 0 0 3 3 3 3 Bacterial SH3 domain Peptidase_S10 PF00450.22 ORF96765 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF96765 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Peptidase_S10 PF00450.22 ORF96052 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF96052 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Asp PF00026.23 ORF95955 - 6.1e-41 140.9 1.5 7.5e-41 140.6 1.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF95955 - 5e-06 26.9 0.5 4.4e-05 23.8 0.1 2.4 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF95955 - 0.079 12.6 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Pkinase PF00069.25 ORF93142 - 2.5e-65 220.5 0.0 3.3e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF93142 - 7.1e-31 107.4 0.0 9.6e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF93142 - 2.2e-05 23.9 0.0 3.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF93142 - 0.00044 19.7 0.0 0.0024 17.2 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Peptidase_S10 PF00450.22 ORF91885 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF91885 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Peptidase_S10 PF00450.22 ORF89425 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF89425 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Asp PF00026.23 ORF88588 - 2e-41 142.5 1.8 2.4e-41 142.2 1.8 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF88588 - 4.9e-06 26.9 0.5 4.4e-05 23.8 0.1 2.4 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF88588 - 0.078 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Tubulin PF00091.25 ORF88509 - 9.3e-65 218.5 0.0 1.3e-64 218.1 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF88509 - 2.5e-51 173.1 0.2 4.5e-51 172.3 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF88509 - 0.032 13.9 0.0 0.068 12.9 0.0 1.6 1 0 0 1 1 1 0 Tubulin domain Asp PF00026.23 ORF87762 - 4.7e-41 141.2 0.3 5.8e-41 140.9 0.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF87762 - 5e-06 26.9 0.3 4.4e-05 23.8 0.1 2.4 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF87762 - 0.08 12.6 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Peptidase_S10 PF00450.22 ORF84622 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF84622 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family tRNA-synt_2 PF00152.20 ORF83051 - 8.6e-82 274.7 0.0 1e-81 274.5 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 ORF83051 - 8e-12 45.0 0.0 2.1e-11 43.6 0.0 1.7 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 ORF83051 - 2.2e-07 30.6 0.0 0.00031 20.3 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Pkinase PF00069.25 ORF82695 - 2.5e-65 220.5 0.0 3.3e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82695 - 7.1e-31 107.4 0.0 9.6e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF82695 - 2.2e-05 23.9 0.0 3.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF82695 - 0.00044 19.7 0.0 0.0024 17.2 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Asp PF00026.23 ORF81184 - 2.3e-41 142.3 1.9 2.9e-41 141.9 1.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF81184 - 0.00062 20.0 0.3 0.0039 17.4 0.1 2.1 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal IL31 PF15209.6 ORF73884 - 0.13 12.0 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Interleukin 31 Aa_trans PF01490.18 ORF72687 - 2.2e-27 95.8 18.8 2.2e-27 95.8 18.8 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein DUF2070 PF09843.9 ORF72687 - 4.5 5.4 7.1 0.13 10.5 0.4 1.8 2 1 0 2 2 2 0 Predicted membrane protein (DUF2070) Peptidase_S10 PF00450.22 ORF72590 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF72590 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Peptidase_S10 PF00450.22 ORF69965 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF69965 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family DOMON PF03351.17 ORF61467 - 7.6e-10 39.1 0.0 1e-09 38.7 0.0 1.1 1 0 0 1 1 1 1 DOMON domain Aa_trans PF01490.18 ORF5932 - 1.8e-26 92.8 18.3 1.8e-26 92.8 18.3 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein PAN_4 PF14295.6 ORF57207 - 4.4e-09 36.1 4.4 1.1e-08 34.8 4.4 1.7 1 0 0 1 1 1 1 PAN domain PAN_1 PF00024.26 ORF57207 - 0.00014 21.8 2.4 0.00025 20.9 2.4 1.4 1 0 0 1 1 1 1 PAN domain Peptidase_S10 PF00450.22 ORF56407 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF56407 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Peptidase_S10 PF00450.22 ORF55697 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF55697 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family HisKA PF00512.25 ORF53079 - 0.14 12.3 0.5 3.2 7.9 0.4 2.4 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain Pkinase PF00069.25 ORF50635 - 2.5e-65 220.5 0.0 3.3e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF50635 - 7.1e-31 107.4 0.0 9.6e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF50635 - 2.2e-05 23.9 0.0 3.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF50635 - 0.00044 19.7 0.0 0.0024 17.2 0.0 2.0 2 0 0 2 2 2 1 Kinase-like HNH PF01844.23 ORF4991 - 9.7e-10 38.5 0.0 1.7e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 ORF4991 - 3e-05 23.8 0.5 5.5e-05 22.9 0.5 1.4 1 0 0 1 1 1 1 HNH endonuclease Peptidase_S10 PF00450.22 ORF4961 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF4961 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Tubulin PF00091.25 ORF46610 - 9.3e-65 218.5 0.0 1.3e-64 218.1 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF46610 - 2.5e-51 173.1 0.2 4.5e-51 172.3 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF46610 - 0.032 13.9 0.0 0.068 12.9 0.0 1.6 1 0 0 1 1 1 0 Tubulin domain Peptidase_S10 PF00450.22 ORF43963 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF43963 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Asp PF00026.23 ORF39899 - 4e-40 138.2 1.2 4.9e-40 137.9 1.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF39899 - 1e-05 25.8 1.3 4.4e-05 23.8 0.1 2.3 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF39899 - 0.077 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Tubulin PF00091.25 ORF3420 - 9.3e-65 218.5 0.0 1.3e-64 218.1 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF3420 - 2.5e-51 173.1 0.2 4.5e-51 172.3 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF3420 - 0.032 13.9 0.0 0.068 12.9 0.0 1.6 1 0 0 1 1 1 0 Tubulin domain Asp PF00026.23 ORF32442 - 1.2e-40 139.9 1.0 1.5e-40 139.6 1.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF32442 - 1e-05 25.8 1.3 4.4e-05 23.8 0.1 2.3 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF32442 - 0.079 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Lipase_3 PF01764.25 ORF30928 - 7.1e-10 38.9 0.0 1.2e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Asp PF00026.23 ORF30656 - 3.9e-42 144.8 0.7 4.8e-42 144.5 0.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF30656 - 4.7e-06 27.0 0.6 4.4e-05 23.8 0.1 2.5 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF30656 - 0.08 12.6 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Peptidase_S10 PF00450.22 ORF29071 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF29071 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Pkinase PF00069.25 ORF27314 - 2.5e-65 220.5 0.0 3.3e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF27314 - 7.1e-31 107.4 0.0 9.6e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF27314 - 2.2e-05 23.9 0.0 3.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF27314 - 0.00044 19.7 0.0 0.0024 17.2 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Peptidase_S10 PF00450.22 ORF22856 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF22856 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Peptidase_S10 PF00450.22 ORF1972 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF1972 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Asp PF00026.23 ORF1773 - 6.1e-41 140.9 1.5 7.5e-41 140.6 1.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF1773 - 5e-06 26.9 0.5 4.4e-05 23.8 0.1 2.4 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF1773 - 0.079 12.6 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Peptidase_S10 PF00450.22 ORF14909 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF14909 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family TPR_12 PF13424.6 ORF14560 - 1.7e-42 143.5 36.2 5.4e-11 42.6 1.0 7.9 3 1 6 9 9 9 8 Tetratricopeptide repeat TPR_10 PF13374.6 ORF14560 - 8.2e-30 101.8 34.2 0.00022 21.0 0.2 9.9 10 0 0 10 10 10 9 Tetratricopeptide repeat TPR_8 PF13181.6 ORF14560 - 1.2e-10 40.8 22.7 0.046 13.9 0.0 8.1 9 0 0 9 9 9 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF14560 - 2.4e-07 30.3 26.1 0.53 10.5 0.0 8.7 9 0 0 9 9 9 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF14560 - 4.6e-05 23.9 28.0 0.91 10.5 0.2 7.8 7 1 1 8 8 7 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF14560 - 8.1e-05 22.4 17.9 2.2 8.5 0.1 8.2 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF14560 - 0.00049 19.8 7.8 8.6 6.4 0.0 6.8 6 1 0 6 6 6 1 Tetratricopeptide repeat DUF3856 PF12968.7 ORF14560 - 0.0024 18.0 15.5 1.3 9.0 0.4 5.4 2 1 4 6 6 6 2 Domain of Unknown Function (DUF3856) TPR_4 PF07721.14 ORF14560 - 0.021 15.4 32.1 2.5 9.0 0.5 9.1 9 0 0 9 9 9 0 Tetratricopeptide repeat MLD PF11647.8 ORF14560 - 0.028 14.7 0.4 2.6 8.4 0.0 3.1 3 0 0 3 3 3 0 Membrane Localization Domain DUF5113 PF17140.4 ORF14560 - 0.32 10.8 1.3 1.4 8.7 0.2 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF5113) TPR_19 PF14559.6 ORF14560 - 6.2 7.4 20.6 1.1 9.8 0.6 5.8 5 1 0 5 5 5 0 Tetratricopeptide repeat Peptidase_S10 PF00450.22 ORF104646 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF104646 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family PSII PF00421.19 ORF95738 - 9.8e-103 344.5 19.2 2.9e-101 339.6 19.2 2.6 1 1 0 1 1 1 1 Photosystem II protein DUF3659 PF12396.8 ORF87364 - 0.098 12.6 1.2 0.44 10.5 1.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3659) DUF4806 PF16064.5 ORF87364 - 0.22 11.9 1.9 3.1 8.2 0.9 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4806) Myb_DNA-bind_3 PF12776.7 ORF87364 - 1.7 9.7 6.5 22 6.1 1.2 3.4 1 1 2 3 3 3 0 Myb/SANT-like DNA-binding domain CENP-F_leu_zip PF10473.9 ORF77539 - 3.6 7.6 48.6 2.5 8.1 20.8 2.5 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IBR PF01485.21 ORF77204 - 6e-23 80.9 18.0 3.6e-13 49.5 2.1 3.3 3 0 0 3 3 3 3 IBR domain, a half RING-finger domain WD40 PF00400.32 ORF76621 - 1.3e-40 136.6 17.9 3e-06 27.9 0.1 9.1 9 0 0 9 9 9 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF76621 - 4.4e-14 52.6 0.3 0.0094 16.2 0.0 5.8 1 1 2 4 4 4 4 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF76621 - 1.5e-11 43.8 12.1 0.051 12.5 0.0 7.4 1 1 7 8 8 8 5 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF76621 - 1.8e-10 40.1 8.5 0.0041 15.8 0.0 6.5 1 1 5 6 6 6 5 Nucleoporin Nup120/160 ubiquitin PF00240.23 ORF76621 - 8.4e-08 31.9 0.0 1.5e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family PD40 PF07676.12 ORF76621 - 0.00053 19.9 1.2 0.56 10.2 0.0 4.0 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Ubiquitin_2 PF14560.6 ORF76621 - 0.0014 19.0 0.0 0.0033 17.9 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-like domain eIF2A PF08662.11 ORF76621 - 0.0017 18.2 0.2 7.8 6.3 0.0 4.0 2 2 2 5 5 5 1 Eukaryotic translation initiation factor eIF2A WD40_3 PF15911.5 ORF76621 - 0.1 12.6 0.0 1.4 9.0 0.0 2.6 2 0 0 2 2 2 0 WD domain, G-beta repeat Pkinase PF00069.25 ORF72039 - 9.5e-13 48.1 0.0 1.3e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF72039 - 9.2e-12 44.8 0.0 1.9e-10 40.4 0.0 2.3 1 1 1 2 2 2 1 Protein tyrosine kinase LRR_4 PF12799.7 ORF72039 - 1.7e-11 44.1 0.0 0.012 16.0 0.1 4.4 3 1 1 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF72039 - 8.5e-10 38.3 0.1 0.061 13.1 0.0 3.4 3 0 0 3 3 3 3 Leucine rich repeat Kdo PF06293.14 ORF72039 - 0.0037 16.6 0.0 0.0065 15.9 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family GAT PF03127.14 ORF72039 - 0.054 13.8 0.4 0.12 12.7 0.4 1.4 1 0 0 1 1 1 0 GAT domain LRR_9 PF14580.6 ORF72039 - 0.12 11.9 0.4 0.4 10.2 0.3 1.8 1 1 0 1 1 1 0 Leucine-rich repeat NAD-GH PF10712.9 ORF66945 - 9.3e-199 661.6 22.3 1e-198 661.4 22.3 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Asp PF00026.23 ORF47333 - 3e-53 181.3 3.9 3.6e-53 181.0 3.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF47333 - 2.1e-06 28.1 1.7 3.9e-05 24.0 0.2 2.4 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal Thioredoxin_6 PF13848.6 ORF40052 - 6e-11 42.6 8.3 3.7e-07 30.2 0.4 3.2 2 1 1 3 3 3 2 Thioredoxin-like domain Transcrip_reg PF01709.20 ORF40052 - 0.031 13.7 0.0 0.052 13.0 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Mur_ligase_M PF08245.12 ORF33753 - 2.7e-52 177.6 0.0 4.9e-52 176.7 0.0 1.4 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 ORF33753 - 3.8e-16 59.1 0.0 1.9e-15 56.9 0.0 2.2 1 1 0 1 1 1 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 ORF33753 - 7.3e-10 39.0 0.0 3.3e-09 36.9 0.0 2.2 1 0 0 1 1 1 1 Mur ligase family, catalytic domain LpxD PF04613.14 ORF33753 - 0.0066 16.2 0.0 0.014 15.2 0.0 1.5 1 0 0 1 1 1 1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DNA_methylase PF00145.17 ORF3358 - 8.9e-25 87.7 0.0 1.1e-24 87.4 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase PAP_assoc PF03828.19 ORF31707 - 1.5e-12 47.5 1.5 3.4e-12 46.4 0.1 2.3 2 0 0 2 2 2 1 Cid1 family poly A polymerase RRM_1 PF00076.22 ORF31707 - 0.038 13.8 0.2 2.1 8.2 0.0 2.8 3 0 0 3 3 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WYL_2 PF10902.8 ORF31707 - 0.13 12.6 0.0 0.26 11.7 0.0 1.5 1 0 0 1 1 1 0 WYL_2, Sm-like SH3 beta-barrel fold PRIMA1 PF16101.5 ORF31707 - 7.3 6.7 15.7 1.5 8.9 5.2 2.7 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 LRR_6 PF13516.6 ORF27901 - 0.0009 19.1 15.6 0.018 15.1 0.0 6.1 7 0 0 7 7 7 2 Leucine Rich repeat FNIP PF05725.12 ORF27901 - 0.045 13.9 0.2 2.2 8.5 0.0 3.1 3 0 0 3 3 3 0 FNIP Repeat DUF521 PF04412.13 ORF27901 - 0.18 10.5 0.0 0.27 9.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) Amidohydro_3 PF07969.11 ORF7024 - 9.8e-77 259.4 0.0 1.2e-76 259.1 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 ORF7024 - 4.8e-15 55.7 0.0 1.6e-14 54.0 0.0 1.8 2 1 0 2 2 2 1 Amidohydrolase family ABC_tran PF00005.27 ORF64644 - 6.1e-11 43.0 0.0 9.2e-10 39.2 0.0 2.1 2 0 0 2 2 2 1 ABC transporter PARP PF00644.20 ORF64644 - 7.1e-06 25.7 0.0 1.2e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain AAA_21 PF13304.6 ORF64644 - 0.00098 19.0 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system N36 PF11438.8 ORF5612 - 0.019 14.7 0.6 0.047 13.5 0.6 1.6 1 0 0 1 1 1 0 36-mer N-terminal peptide of the N protein (N36) Herpes_gE PF02480.16 ORF5612 - 0.16 10.7 0.0 0.26 10.0 0.0 1.2 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E ORC6 PF05460.13 ORF5612 - 3.1 7.0 6.3 0.63 9.3 0.7 2.1 2 0 0 2 2 2 0 Origin recognition complex subunit 6 (ORC6) LOR PF04525.12 ORF50362 - 9e-21 74.3 0.0 2.3e-09 37.1 0.0 2.2 2 0 0 2 2 2 2 LURP-one-related Scramblase PF03803.15 ORF50362 - 0.00024 20.5 0.0 0.63 9.3 0.0 2.6 2 0 0 2 2 2 2 Scramblase AAA_30 PF13604.6 ORF40307 - 5.5e-17 62.1 0.0 9.5e-17 61.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF40307 - 2.1e-07 30.9 0.1 0.00053 19.8 0.0 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 ORF40307 - 3.7e-07 30.6 0.2 4.6e-05 23.8 0.2 2.4 1 1 0 1 1 1 1 AAA domain PIF1 PF05970.14 ORF40307 - 4.4e-05 22.8 0.0 0.0011 18.2 0.0 2.2 2 0 0 2 2 2 1 PIF1-like helicase AAA_22 PF13401.6 ORF40307 - 8.3e-05 22.9 0.1 0.00027 21.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 ORF40307 - 0.00014 21.4 0.0 0.00022 20.8 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 ORF40307 - 0.00015 22.2 0.1 0.00038 20.9 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 ORF40307 - 0.00038 20.3 0.2 0.25 11.1 0.0 2.2 1 1 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 ORF40307 - 0.00056 19.3 0.0 0.00091 18.7 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 ORF40307 - 0.00081 19.4 0.0 0.0021 18.0 0.0 1.8 2 0 0 2 2 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF40307 - 0.0015 18.3 0.1 0.0026 17.5 0.1 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein GvpD PF07088.11 ORF40307 - 0.0017 17.1 0.0 0.0024 16.6 0.0 1.1 1 0 0 1 1 1 1 GvpD gas vesicle protein AAA PF00004.29 ORF40307 - 0.0024 18.3 0.0 0.0039 17.6 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MobB PF03205.14 ORF40307 - 0.0026 17.7 0.1 0.0047 16.8 0.1 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 ORF40307 - 0.0031 17.4 0.1 0.0062 16.5 0.1 1.5 1 0 0 1 1 1 1 NTPase Zeta_toxin PF06414.12 ORF40307 - 0.0037 16.6 0.0 0.0066 15.7 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 ORF40307 - 0.0039 17.4 0.0 0.0081 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 ORF40307 - 0.0044 16.0 0.0 0.0068 15.4 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 ORF40307 - 0.013 16.1 0.0 0.035 14.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 ORF40307 - 0.015 15.3 0.0 0.034 14.1 0.0 1.6 1 0 0 1 1 1 0 NACHT domain TsaE PF02367.17 ORF40307 - 0.018 15.0 0.0 0.18 11.8 0.0 2.2 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 ORF40307 - 0.038 13.6 0.0 0.065 12.8 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain TrwB_AAD_bind PF10412.9 ORF40307 - 0.044 12.7 0.1 0.084 11.8 0.1 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DUF2075 PF09848.9 ORF40307 - 0.044 13.0 0.0 0.065 12.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) APS_kinase PF01583.20 ORF40307 - 0.1 12.5 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase LpxK PF02606.14 ORF40307 - 0.13 11.3 0.1 0.22 10.6 0.1 1.2 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase ATPase PF06745.13 ORF40307 - 0.13 11.5 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 KaiC RNA_helicase PF00910.22 ORF40307 - 0.2 12.1 0.0 0.46 10.9 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Jacalin PF01419.17 ORF3682 - 7.2e-16 58.3 9.6 1.3e-10 41.3 2.2 2.7 2 1 0 2 2 2 2 Jacalin-like lectin domain PLDc_2 PF13091.6 ORF232 - 6.3e-32 110.3 0.0 2.6e-22 79.1 0.0 2.3 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 ORF232 - 1.8e-14 53.2 2.8 5.5e-08 32.7 0.2 2.4 2 0 0 2 2 2 2 Phospholipase D Active site motif PCI PF01399.27 ORF11408 - 3.7e-17 62.7 1.8 1.3e-16 61.0 0.6 2.5 2 0 0 2 2 2 1 PCI domain TPR_7 PF13176.6 ORF11408 - 0.0093 15.9 1.8 4.5 7.5 0.1 4.4 4 0 0 4 4 4 1 Tetratricopeptide repeat CSN8_PSD8_EIF3K PF10075.9 ORF11408 - 0.043 13.8 1.6 0.14 12.1 0.2 2.3 1 1 0 2 2 2 0 CSN8/PSMD8/EIF3K family Asp PF00026.23 ORF110770 - 2.4e-42 145.5 3.7 3.1e-42 145.1 3.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF110770 - 1.5e-05 25.3 0.3 5.2e-05 23.5 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal Gemini_AL3 PF01407.17 ORF110770 - 0.072 12.9 0.1 0.81 9.5 0.0 2.5 3 0 0 3 3 3 0 Geminivirus AL3 protein Ion_trans PF00520.31 ORF98695 - 2e-24 86.2 13.4 3.1e-24 85.6 13.4 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF98695 - 8.8e-12 44.8 7.1 2.2e-11 43.6 7.1 1.7 1 0 0 1 1 1 1 Ion channel EF-hand_1 PF00036.32 ORF98695 - 6.6e-07 28.4 0.3 0.0039 16.6 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF98695 - 2.7e-05 23.7 0.3 0.27 11.3 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF98695 - 3.5e-05 23.5 2.2 0.00076 19.3 0.2 2.6 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF98695 - 0.00025 21.5 2.6 0.096 13.2 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF98695 - 0.043 13.3 0.0 0.24 11.0 0.0 2.2 3 0 0 3 3 3 0 EF hand Pyr_redox_2 PF07992.14 ORF96704 - 3.6e-69 233.2 1.7 3.6e-69 233.2 1.7 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF96704 - 8.5e-37 125.8 1.1 1.1e-35 122.2 0.4 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF96704 - 2.7e-18 66.3 1.5 4.5e-18 65.6 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF96704 - 9.2e-16 58.0 2.9 5.8e-15 55.3 2.9 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF96704 - 0.00041 19.6 1.2 0.0081 15.3 0.1 2.4 2 0 0 2 2 2 1 Glucose inhibited division protein A HI0933_like PF03486.14 ORF96704 - 0.0097 14.7 0.6 8.8 4.9 0.6 3.0 3 0 0 3 3 3 2 HI0933-like protein AlaDh_PNT_C PF01262.21 ORF96704 - 0.014 14.7 0.9 0.16 11.3 0.0 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 ORF96704 - 0.022 13.8 4.7 0.84 8.6 0.1 2.6 3 0 0 3 3 3 0 FAD binding domain FAD_oxidored PF12831.7 ORF96704 - 0.031 13.6 0.1 0.13 11.5 0.1 1.9 2 0 0 2 2 2 0 FAD dependent oxidoreductase PsaF PF17550.2 ORF96704 - 0.051 13.1 0.0 3 7.3 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function K_oxygenase PF13434.6 ORF96704 - 0.16 11.1 0.0 0.32 10.1 0.0 1.5 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) tRNA-synt_1d PF00750.19 ORF8921 - 1.9e-164 546.7 0.7 2.4e-164 546.4 0.7 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF8921 - 3.5e-36 124.0 0.2 1.8e-35 121.7 0.3 2.0 2 0 0 2 2 2 1 DALR anticodon binding domain Thiol_cytolys_C PF17440.2 ORF8921 - 0.045 13.9 0.5 0.094 12.9 0.5 1.5 1 0 0 1 1 1 0 Thiol-activated cytolysin beta sandwich domain tRNA-synt_1e PF01406.19 ORF8921 - 0.052 12.9 0.1 0.075 12.4 0.1 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain Ribosomal_L20 PF00453.18 ORF8921 - 0.074 13.2 0.1 0.16 12.0 0.1 1.5 1 0 0 1 1 1 0 Ribosomal protein L20 Asp_protease_2 PF13650.6 ORF82203 - 1.2e-08 35.5 1.6 2.5e-05 24.8 0.0 2.5 2 1 0 2 2 2 2 Aspartyl protease gag-asp_proteas PF13975.6 ORF82203 - 2.2e-05 24.9 0.2 0.001 19.6 0.0 2.4 2 0 0 2 2 2 1 gag-polyprotein putative aspartyl protease RVP PF00077.20 ORF82203 - 0.035 14.4 0.0 0.3 11.4 0.0 2.2 2 0 0 2 2 2 0 Retroviral aspartyl protease Nbl1_Borealin_N PF10444.9 ORF82203 - 0.065 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Chloroa_b-bind PF00504.21 ORF80352 - 1.2e-78 263.2 0.1 3.3e-32 112.2 0.0 3.1 3 0 0 3 3 3 3 Chlorophyll A-B binding protein DUF1304 PF06993.12 ORF80352 - 0.0087 16.0 0.2 25 4.9 0.0 3.3 3 0 0 3 3 3 2 Protein of unknown function (DUF1304) BtrH_N PF14399.6 ORF80352 - 0.054 13.8 0.0 30 4.9 0.0 3.5 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal DUF2678 PF10856.8 ORF80352 - 0.068 13.1 0.0 12 5.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2678) MitoNEET_N PF10660.9 ORF80352 - 0.38 10.8 1.2 36 4.5 0.0 3.1 4 0 0 4 4 4 0 Iron-containing outer mitochondrial membrane protein N-terminus ADK PF00406.22 ORF77316 - 6.9e-45 152.8 0.0 6.7e-22 78.2 0.0 2.5 2 1 0 2 2 2 2 Adenylate kinase AAA_17 PF13207.6 ORF77316 - 5.1e-24 85.2 0.0 5.9e-12 46.2 0.0 2.8 2 1 0 2 2 2 2 AAA domain AAA_18 PF13238.6 ORF77316 - 7.9e-10 39.4 0.1 1.1e-07 32.4 0.0 2.8 2 1 0 2 2 2 1 AAA domain Hydin_ADK PF17213.3 ORF77316 - 2.9e-05 24.5 0.0 0.2 12.0 0.0 3.4 2 1 1 3 3 3 1 Hydin Adenylate kinase-like domain Cytidylate_kin2 PF13189.6 ORF77316 - 0.0007 19.8 0.1 1.7 8.8 0.0 3.6 3 1 0 3 3 3 1 Cytidylate kinase-like family AAA PF00004.29 ORF77316 - 0.0021 18.5 0.0 0.014 15.9 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 ORF77316 - 0.0034 17.6 0.0 0.019 15.1 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF77316 - 0.008 16.2 0.0 5.7 6.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) DUF5586 PF17824.1 ORF77316 - 0.0084 15.3 0.6 0.016 14.4 0.3 1.6 2 0 0 2 2 2 1 Family of unknown function (DUF5586) Methyltransf_8 PF05148.15 ORF77316 - 0.049 13.5 0.0 0.082 12.7 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase SKI PF01202.22 ORF77316 - 0.058 13.5 1.6 0.39 10.8 0.0 3.0 4 0 0 4 4 4 0 Shikimate kinase dNK PF01712.19 ORF77316 - 0.14 12.0 1.6 3.2 7.5 0.0 2.9 3 0 0 3 3 3 0 Deoxynucleoside kinase DUF5582 PF17819.1 ORF77316 - 0.17 12.3 0.8 0.36 11.3 0.8 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5582) Ion_trans_2 PF07885.16 ORF7364 - 2.5e-13 49.8 4.6 2.5e-13 49.8 4.6 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF7364 - 4.1e-10 39.6 0.9 5.8e-08 32.7 0.2 2.5 2 0 0 2 2 2 2 Calcium-activated SK potassium channel Bax1-I PF01027.20 ORF7364 - 0.00053 19.9 2.8 0.00053 19.9 2.8 2.1 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 Lig_chan PF00060.26 ORF7364 - 0.0016 18.3 3.4 0.0044 16.9 3.2 1.8 1 1 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF7364 - 0.0017 17.6 15.7 0.0044 16.3 15.7 1.8 1 1 0 1 1 1 1 Ion transport protein DUF2963 PF11178.8 ORF7364 - 0.073 12.8 0.1 0.21 11.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) JHBP PF06585.11 ORF68250 - 0.0014 17.8 0.6 0.0014 17.8 0.6 2.1 2 1 0 2 2 2 1 Haemolymph juvenile hormone binding protein (JHBP) LBP_BPI_CETP PF01273.25 ORF68250 - 0.016 14.8 0.1 0.043 13.4 0.1 1.8 1 1 0 1 1 1 0 LBP / BPI / CETP family, N-terminal domain PCC_BT PF18140.1 ORF68250 - 0.028 14.8 0.6 0.066 13.6 0.6 1.5 1 0 0 1 1 1 0 Propionyl-coenzyme A carboxylase BT domain PP_kinase_C_1 PF17941.1 ORF68250 - 0.12 12.0 0.5 0.24 11.0 0.5 1.4 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain 1 WzyE PF06899.11 ORF6546 - 3.3e-264 876.7 46.2 3.8e-264 876.5 46.2 1.0 1 0 0 1 1 1 1 WzyE protein, O-antigen assembly polymerase ABC_tran PF00005.27 ORF50378 - 5.5e-34 117.6 1.4 9e-34 116.9 0.0 2.1 2 0 0 2 2 2 1 ABC transporter ABC_membrane PF00664.23 ORF50378 - 1.8e-13 50.8 0.5 2.8e-13 50.1 0.5 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF50378 - 1.9e-11 43.8 0.3 9.6e-10 38.3 0.0 2.3 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF50378 - 4.7e-05 23.3 5.0 8.4e-05 22.4 5.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 ORF50378 - 0.00015 21.6 0.0 0.013 15.3 0.0 2.3 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF50378 - 0.0012 18.7 0.0 0.0032 17.4 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 ORF50378 - 0.002 18.4 0.0 0.0085 16.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF50378 - 0.0026 16.9 0.0 0.0051 16.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) MMR_HSR1 PF01926.23 ORF50378 - 0.0065 16.5 0.6 0.028 14.5 0.6 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase Zeta_toxin PF06414.12 ORF50378 - 0.0067 15.7 0.0 0.015 14.6 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_29 PF13555.6 ORF50378 - 0.011 15.4 0.1 0.031 14.0 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF50378 - 0.019 15.3 1.2 0.053 13.9 1.2 2.0 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 ORF50378 - 0.021 14.9 0.1 0.021 14.9 0.1 2.8 3 1 1 4 4 4 0 AAA domain DUF87 PF01935.17 ORF50378 - 0.025 14.7 0.1 0.025 14.7 0.1 2.5 2 1 0 2 2 2 0 Helicase HerA, central domain AAA_24 PF13479.6 ORF50378 - 0.036 13.8 0.0 0.07 12.8 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF50378 - 0.062 12.8 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_23 PF13476.6 ORF50378 - 1.5 9.3 19.5 78 3.7 19.5 2.6 1 1 0 1 1 1 0 AAA domain UNC-93 PF05978.16 ORF45551 - 3.6e-05 23.5 5.8 3.6e-05 23.5 5.8 3.4 2 1 1 3 3 3 1 Ion channel regulatory protein UNC-93 MatE PF01554.18 ORF44637 - 6.5e-24 84.4 31.7 1.3e-18 67.2 2.2 2.8 2 1 0 2 2 2 2 MatE Ion_trans_2 PF07885.16 ORF427 - 2.5e-13 49.8 4.6 2.5e-13 49.8 4.6 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF427 - 4.1e-10 39.6 0.9 5.8e-08 32.7 0.2 2.5 2 0 0 2 2 2 2 Calcium-activated SK potassium channel Bax1-I PF01027.20 ORF427 - 0.00053 19.9 2.8 0.00053 19.9 2.8 2.1 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 Lig_chan PF00060.26 ORF427 - 0.0016 18.3 3.4 0.0044 16.9 3.2 1.8 1 1 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF427 - 0.0017 17.6 15.7 0.0044 16.3 15.7 1.8 1 1 0 1 1 1 1 Ion transport protein DUF2963 PF11178.8 ORF427 - 0.073 12.8 0.1 0.21 11.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) Ion_trans_2 PF07885.16 ORF38718 - 2.5e-13 49.8 4.6 2.5e-13 49.8 4.6 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF38718 - 4.1e-10 39.6 0.9 5.8e-08 32.7 0.2 2.5 2 0 0 2 2 2 2 Calcium-activated SK potassium channel Bax1-I PF01027.20 ORF38718 - 0.00053 19.9 2.8 0.00053 19.9 2.8 2.1 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 Lig_chan PF00060.26 ORF38718 - 0.0016 18.3 3.4 0.0044 16.9 3.2 1.8 1 1 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF38718 - 0.0017 17.6 15.7 0.0044 16.3 15.7 1.8 1 1 0 1 1 1 1 Ion transport protein DUF2963 PF11178.8 ORF38718 - 0.073 12.8 0.1 0.21 11.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) LCIB_C_CA PF18599.1 ORF30323 - 2.2 7.5 11.2 0.64 9.3 7.4 2.0 1 1 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases NPV_P10 PF05531.12 ORF30323 - 8.9 6.9 13.8 4.5 7.8 0.4 3.7 2 1 2 4 4 4 0 Nucleopolyhedrovirus P10 protein AP3D1 PF06375.11 ORF25485 - 0.021 15.1 6.1 0.021 15.1 6.1 4.2 2 1 2 4 4 4 0 AP-3 complex subunit delta-1 IQ PF00612.27 ORF25485 - 0.04 13.7 0.8 0.53 10.2 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif VIT1 PF01988.19 ORF22772 - 0.12 12.2 0.1 0.25 11.2 0.1 1.4 1 0 0 1 1 1 0 VIT family Imm-NTF2 PF15655.6 ORF22772 - 0.13 12.5 2.6 0.42 10.9 0.5 2.6 2 0 0 2 2 2 0 NTF2 fold immunity protein ADK PF00406.22 ORF15565 - 2.7e-54 183.4 0.2 7.2e-31 107.3 0.0 2.2 2 0 0 2 2 2 2 Adenylate kinase AAA_17 PF13207.6 ORF15565 - 1.6e-32 112.7 0.1 2.8e-17 63.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 ORF15565 - 4e-13 50.1 0.1 3.4e-06 27.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 ORF15565 - 6.6e-07 29.6 0.0 0.0027 17.9 0.1 3.4 3 1 0 3 3 3 2 AAA domain RuvB_N PF05496.12 ORF15565 - 8.6e-05 22.3 0.0 0.42 10.4 0.0 2.3 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 ORF15565 - 0.00016 22.1 0.0 0.0015 18.9 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Hydin_ADK PF17213.3 ORF15565 - 0.00034 21.0 0.1 0.046 14.0 0.0 2.6 3 0 0 3 3 2 1 Hydin Adenylate kinase-like domain Cytidylate_kin PF02224.18 ORF15565 - 0.00039 20.2 0.0 0.88 9.3 0.0 2.4 2 0 0 2 2 2 2 Cytidylate kinase Cytidylate_kin2 PF13189.6 ORF15565 - 0.00042 20.5 0.1 0.24 11.5 0.0 2.8 2 1 0 2 2 2 1 Cytidylate kinase-like family AAA_5 PF07728.14 ORF15565 - 0.00073 19.5 0.0 0.38 10.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF15565 - 0.00076 19.5 0.0 0.37 10.7 0.0 2.4 2 0 0 2 2 2 2 Rad17 P-loop domain Thymidylate_kin PF02223.17 ORF15565 - 0.0011 18.6 0.2 4.2 7.0 0.0 3.6 2 1 0 2 2 2 1 Thymidylate kinase AAA_28 PF13521.6 ORF15565 - 0.0037 17.5 0.0 0.023 15.0 0.0 2.0 2 0 0 2 2 2 1 AAA domain DUF5582 PF17819.1 ORF15565 - 0.0051 17.3 0.2 0.011 16.2 0.2 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5582) DUF5586 PF17824.1 ORF15565 - 0.018 14.2 0.0 0.026 13.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5586) AAA_16 PF13191.6 ORF15565 - 0.024 15.0 0.0 0.43 11.0 0.0 2.4 2 0 0 2 2 2 0 AAA ATPase domain Toxin_25 PF08095.11 ORF15565 - 0.076 13.0 1.3 0.17 11.9 0.1 2.1 2 0 0 2 2 2 0 Hefutoxin family Sigma54_activ_2 PF14532.6 ORF15565 - 0.12 12.4 0.0 2.1 8.4 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain RIIa PF02197.17 ORF15565 - 0.13 12.0 0.0 0.35 10.6 0.0 1.8 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit Arb2 PF09757.9 ORF15565 - 1.3 8.1 4.2 6.5 5.8 0.1 2.5 3 0 0 3 3 3 0 Arb2 domain Ion_trans_2 PF07885.16 ORF111497 - 2.5e-13 49.8 4.6 2.5e-13 49.8 4.6 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF111497 - 4.1e-10 39.6 0.9 5.8e-08 32.7 0.2 2.5 2 0 0 2 2 2 2 Calcium-activated SK potassium channel Bax1-I PF01027.20 ORF111497 - 0.00053 19.9 2.8 0.00053 19.9 2.8 2.1 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 Lig_chan PF00060.26 ORF111497 - 0.0016 18.3 3.4 0.0044 16.9 3.2 1.8 1 1 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF111497 - 0.0017 17.6 15.7 0.0044 16.3 15.7 1.8 1 1 0 1 1 1 1 Ion transport protein DUF2963 PF11178.8 ORF111497 - 0.073 12.8 0.1 0.21 11.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) Peripla_BP_5 PF13433.6 ORF96705 - 0.16 10.9 0.2 0.24 10.3 0.2 1.2 1 0 0 1 1 1 0 Periplasmic binding protein domain Sugar_tr PF00083.24 ORF83549 - 1.4e-41 142.8 16.3 6.8e-22 77.9 3.0 2.0 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF83549 - 5.2e-07 28.9 32.1 5.2e-07 28.9 32.1 2.3 1 1 0 1 1 1 1 Major Facilitator Superfamily Acetyltransf_16 PF05301.11 ORF81820 - 1.7e-18 67.0 0.9 2.9e-18 66.2 0.9 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Rep_fac-A_C PF08646.10 ORF81820 - 0.11 12.3 0.3 0.2 11.4 0.3 1.4 1 0 0 1 1 1 0 Replication factor-A C terminal domain bZIP_1 PF00170.21 ORF59141 - 7.5e-07 29.2 13.3 7.5e-07 29.2 13.3 3.0 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF59141 - 1.8e-06 27.9 13.4 1.8e-06 27.9 13.4 2.9 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF59141 - 0.053 13.3 1.1 0.11 12.3 1.1 1.4 1 0 0 1 1 1 0 Peptidase M76 family DUF5320 PF17253.2 ORF59141 - 3 9.0 5.3 0.82 10.8 1.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Ion_trans PF00520.31 ORF49310 - 0.015 14.5 15.2 0.16 11.1 15.2 2.1 1 1 0 1 1 1 0 Ion transport protein DUF1664 PF07889.12 ORF49310 - 0.017 15.1 0.1 0.029 14.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) FAM184 PF15665.5 ORF49310 - 0.044 13.5 1.4 0.065 13.0 1.4 1.1 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Jnk-SapK_ap_N PF09744.9 ORF49310 - 0.09 13.0 2.3 0.13 12.4 2.3 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Lebercilin PF15619.6 ORF49310 - 0.097 12.3 3.7 0.14 11.8 3.7 1.1 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease BLOC1_2 PF10046.9 ORF49310 - 0.12 12.7 0.4 0.21 11.9 0.4 1.3 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 EzrA PF06160.12 ORF49310 - 0.15 10.2 1.1 0.21 9.7 1.1 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Fib_alpha PF08702.10 ORF49310 - 0.19 11.9 0.5 0.3 11.3 0.5 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Acetyltransf_16 PF05301.11 ORF46286 - 1.7e-18 67.0 0.9 2.9e-18 66.2 0.9 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Rep_fac-A_C PF08646.10 ORF46286 - 0.11 12.3 0.3 0.2 11.4 0.3 1.4 1 0 0 1 1 1 0 Replication factor-A C terminal domain CPSase_L_D2 PF02786.17 ORF41238 - 1.5e-86 289.3 0.0 2.3e-86 288.7 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 ORF41238 - 2.6e-44 150.2 0.1 5.6e-44 149.2 0.1 1.6 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 ORF41238 - 3.5e-38 130.0 0.0 6.9e-38 129.1 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp_3 PF02655.14 ORF41238 - 1.3e-07 31.8 0.0 2.3e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 ORF41238 - 1.6e-07 31.1 0.0 4.3e-07 29.7 0.0 1.7 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 ORF41238 - 3e-07 30.2 0.0 5.8e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 ORF41238 - 0.036 13.8 0.0 0.062 13.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_4 PF13535.6 ORF41238 - 0.098 12.3 0.0 0.52 9.9 0.0 2.1 3 1 1 4 4 4 0 ATP-grasp domain Asp PF00026.23 ORF32273 - 9.1e-30 104.1 0.6 8.3e-14 51.7 0.2 2.6 2 1 0 2 2 2 2 Eukaryotic aspartyl protease gag-asp_proteas PF13975.6 ORF32273 - 0.046 14.3 0.2 5 7.8 0.1 2.7 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 ORF32273 - 0.057 14.1 0.6 4.2 8.1 0.1 2.6 2 0 0 2 2 2 0 Aspartyl protease TAXi_N PF14543.6 ORF32273 - 0.31 11.3 3.1 3.2 7.9 0.4 2.9 1 1 2 3 3 3 0 Xylanase inhibitor N-terminal EF-hand_6 PF13405.6 ORF26753 - 3.2e-09 36.0 0.0 0.004 17.0 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF26753 - 4.5e-09 35.2 0.4 0.0018 17.7 0.0 2.8 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF26753 - 4.8e-09 35.9 0.2 7e-05 22.6 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF26753 - 1.7e-08 34.8 0.8 4.4e-08 33.5 0.8 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF26753 - 2.1e-08 33.3 2.7 0.0029 17.0 0.0 3.0 3 0 0 3 3 3 2 EF hand Ion_trans PF00520.31 ORF26753 - 9.2e-08 31.6 0.1 1.3e-07 31.1 0.1 1.1 1 0 0 1 1 1 1 Ion transport protein Ricin_B_lectin PF00652.22 ORF24584 - 1.5e-15 57.6 0.3 3.4e-14 53.2 0.1 2.8 2 1 0 2 2 2 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF24584 - 0.00024 21.8 1.0 0.0028 18.3 0.4 2.9 1 1 0 2 2 2 1 Ricin-type beta-trefoil lectin domain-like DEAD PF00270.29 ORF22450 - 2.5e-44 151.1 0.0 9.8e-44 149.2 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF22450 - 3.8e-30 104.5 0.0 7.3e-29 100.3 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF22450 - 0.0029 17.6 0.0 0.0079 16.2 0.0 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Pyr_redox_2 PF07992.14 ORF21662 - 5.7e-53 180.1 0.0 6.8e-53 179.8 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF21662 - 5.5e-11 42.9 0.8 1e-08 35.6 0.2 3.0 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF21662 - 2e-05 24.0 0.0 0.074 12.3 0.0 2.5 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF21662 - 0.14 11.7 0.8 3.2 7.2 0.0 2.7 2 1 0 3 3 3 0 FAD dependent oxidoreductase bZIP_1 PF00170.21 ORF18768 - 7.5e-07 29.2 13.3 7.5e-07 29.2 13.3 3.0 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF18768 - 1.8e-06 27.9 13.4 1.8e-06 27.9 13.4 2.9 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF18768 - 0.053 13.3 1.1 0.11 12.3 1.1 1.4 1 0 0 1 1 1 0 Peptidase M76 family DUF5320 PF17253.2 ORF18768 - 3 9.0 5.3 0.82 10.8 1.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5320) RRM_1 PF00076.22 ORF16901 - 6.4e-15 54.7 0.0 2e-14 53.1 0.0 1.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PHM7_cyt PF14703.6 ORF16901 - 0.025 14.8 0.7 4.6 7.4 0.0 2.8 2 1 1 3 3 3 0 Cytosolic domain of 10TM putative phosphate transporter RRM_Rrp7 PF17799.1 ORF16901 - 0.03 14.1 0.1 0.16 11.8 0.0 2.1 1 1 1 2 2 2 0 Rrp7 RRM-like N-terminal domain LMF1 PF06762.14 ORF1470 - 2.3e-91 307.2 11.5 1.1e-48 166.5 5.7 2.0 1 1 1 2 2 2 2 Lipase maturation factor bZIP_1 PF00170.21 ORF13569 - 7.5e-07 29.2 13.3 7.5e-07 29.2 13.3 3.0 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF13569 - 1.8e-06 27.9 13.4 1.8e-06 27.9 13.4 2.9 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF13569 - 0.053 13.3 1.1 0.11 12.3 1.1 1.4 1 0 0 1 1 1 0 Peptidase M76 family DUF5320 PF17253.2 ORF13569 - 3 9.0 5.3 0.82 10.8 1.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Peptidase_C13 PF01650.18 ORF11127 - 3.8e-94 315.0 0.0 5.5e-94 314.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase C13 family UDPGT PF00201.18 ORF108373 - 3.7e-15 55.7 0.0 5.4e-15 55.2 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF108373 - 0.0033 17.4 0.0 0.0058 16.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Helicase_C PF00271.31 ORF107912 - 1.1e-05 25.7 0.0 2.2e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Snapin_Pallidin PF14712.6 ORF107912 - 0.032 14.6 1.9 0.088 13.2 1.9 1.8 1 0 0 1 1 1 0 Snapin/Pallidin CENP-O PF09496.10 ORF107912 - 0.22 11.5 4.8 0.046 13.7 0.7 1.9 2 0 0 2 2 2 0 Cenp-O kinetochore centromere component OmpH PF03938.14 ORF107912 - 2.5 8.4 11.8 0.13 12.6 4.0 2.3 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) zf-CCHC_2 PF13696.6 NODE_10493_length_1347_cov_69.870427_g7755_i0reverse_frame_2 - 0.54 10.1 3.6 0.23 11.3 0.7 1.9 2 0 0 2 2 2 0 Zinc knuckle Pox_D5 PF03288.16 ORF99808 - 0.038 14.5 2.7 1.9 9.0 0.0 3.2 3 0 0 3 3 3 0 Poxvirus D5 protein-like Ank_2 PF12796.7 ORF91171 - 2.9e-13 50.2 1.1 7e-11 42.6 0.1 3.0 2 1 1 3 3 3 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF91171 - 3.2e-09 36.9 0.3 8.4e-06 26.0 0.2 3.4 2 1 0 3 3 3 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF91171 - 5.4e-09 36.4 1.7 2.9e-06 27.7 0.1 3.6 3 1 1 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF91171 - 1.3e-08 34.4 2.7 0.00095 19.4 0.0 4.7 4 0 0 4 4 4 1 Ankyrin repeat Ank PF00023.30 ORF91171 - 3.9e-08 33.4 6.5 7.1e-05 23.1 0.1 4.1 4 0 0 4 4 4 2 Ankyrin repeat Atg14 PF10186.9 ORF91171 - 0.59 9.2 15.7 1.1 8.2 15.7 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 HOOK PF05622.12 ORF82153 - 6.6e-05 21.3 87.1 0.00014 20.1 87.1 1.6 1 1 0 1 1 1 1 HOOK protein Rootletin PF15035.6 ORF82153 - 0.0023 18.0 7.9 0.0023 18.0 7.9 4.4 1 1 3 4 4 4 2 Ciliary rootlet component, centrosome cohesion DivIC PF04977.15 ORF82153 - 0.0081 15.9 5.8 0.0081 15.9 5.8 9.8 3 3 7 10 10 10 4 Septum formation initiator bZIP_1 PF00170.21 ORF82153 - 0.011 15.8 3.2 0.011 15.8 3.2 10.1 2 2 8 10 10 10 0 bZIP transcription factor YabA PF06156.13 ORF82153 - 0.023 15.3 10.3 0.023 15.3 10.3 6.2 1 1 5 6 6 6 0 Initiation control protein YabA DASH_Hsk3 PF08227.11 ORF82153 - 0.32 11.4 3.2 18 5.8 0.4 3.7 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like KASH_CCD PF14662.6 ORF82153 - 0.49 10.2 92.9 1.5 8.6 20.3 4.8 1 1 3 4 4 4 0 Coiled-coil region of CCDC155 or KASH GAS PF13851.6 ORF82153 - 2 7.7 96.7 0.37 10.1 14.8 4.3 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding POT1 PF02765.17 ORF82021 - 3.7e-46 156.5 9.3 3.6e-44 150.1 1.1 2.5 2 0 0 2 2 2 2 Telomeric single stranded DNA binding POT1/CDC13 tRNA_anti-codon PF01336.25 ORF82021 - 0.014 15.3 0.3 3.7 7.6 0.1 3.5 3 1 0 3 3 3 0 OB-fold nucleic acid binding domain T4BSS_DotH_IcmK PF12293.8 ORF82021 - 0.11 11.7 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion PPTA PF01239.22 ORF82021 - 0.14 11.9 0.2 3.4 7.5 0.0 3.0 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat Tubulin PF00091.25 ORF76765 - 4.1e-64 216.4 0.0 5.6e-64 216.0 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF76765 - 1.1e-49 167.8 0.1 1.8e-49 167.1 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF76765 - 0.033 13.9 0.0 0.11 12.1 0.0 2.0 3 0 0 3 3 3 0 Tubulin domain MMR_HSR1 PF01926.23 ORF76527 - 5.2e-13 49.1 0.0 3.2e-12 46.5 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF76527 - 1.9e-05 24.3 0.0 9.2e-05 22.0 0.0 2.0 2 1 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF76527 - 0.00091 19.2 0.0 0.9 9.4 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 ORF76527 - 0.012 15.7 0.0 0.32 11.0 0.0 2.8 2 1 1 3 3 3 0 Dynamin family Roc PF08477.13 ORF76527 - 0.15 12.2 0.0 0.3 11.3 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase RPAP1_N PF08621.10 ORF76527 - 0.25 11.1 0.1 0.25 11.1 0.1 2.5 3 0 0 3 3 3 0 RPAP1-like, N-terminal Occludin_ELL PF07303.13 ORF57013 - 0.0011 19.6 16.8 0.013 16.2 4.5 3.7 3 2 1 4 4 4 2 Occludin homology domain DUF1216 PF06746.11 ORF57013 - 0.012 15.6 6.6 0.012 15.6 6.6 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1216) BLOC1_2 PF10046.9 ORF57013 - 0.013 15.8 0.2 0.013 15.8 0.2 3.6 3 2 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 COX16 PF14138.6 ORF57013 - 0.13 12.8 2.2 0.89 10.1 2.2 2.4 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 DUF3573 PF12097.8 ORF57013 - 1 8.1 10.1 0.059 12.2 3.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3573) Prominin PF05478.11 ORF57013 - 8.1 4.3 18.9 0.091 10.7 2.9 2.3 2 0 0 2 2 2 0 Prominin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks20.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks20.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks20.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks20.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- S4 PF01479.25 ORF94969 - 1e-12 47.6 0.1 1.7e-12 46.8 0.1 1.3 1 0 0 1 1 1 1 S4 domain GUN4 PF05419.12 ORF94946 - 0.14 12.3 0.4 0.26 11.4 0.0 1.5 2 0 0 2 2 2 0 GUN4-like S4 PF01479.25 ORF94926 - 1e-12 47.6 0.1 1.7e-12 46.8 0.1 1.3 1 0 0 1 1 1 1 S4 domain dCMP_cyt_deam_1 PF00383.23 ORF9488 - 6e-05 22.9 0.9 8.4e-05 22.4 0.4 1.4 2 0 0 2 2 2 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 ORF9488 - 0.075 12.8 0.2 0.1 12.3 0.2 1.2 1 0 0 1 1 1 0 MafB19-like deaminase Bd3614-deam PF14439.6 ORF9488 - 0.81 9.8 2.9 0.26 11.4 0.4 1.5 2 0 0 2 2 2 0 Bd3614-like deaminase CDC45 PF02724.14 ORF94844 - 0.0092 14.3 4.7 0.01 14.2 4.7 1.1 1 0 0 1 1 1 1 CDC45-like protein Tim54 PF11711.8 ORF94844 - 0.045 12.5 4.6 0.053 12.3 4.6 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Connexin PF00029.19 ORF94844 - 0.062 13.0 3.6 0.076 12.8 3.6 1.1 1 0 0 1 1 1 0 Connexin DNA_pol_phi PF04931.13 ORF94844 - 0.11 10.6 7.7 0.1 10.7 7.7 1.0 1 0 0 1 1 1 0 DNA polymerase phi DUF2828 PF11443.8 ORF94844 - 0.25 9.4 4.1 0.28 9.2 4.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) TRAP_alpha PF03896.16 ORF94844 - 0.34 10.1 6.3 0.4 9.8 6.3 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit DUF789 PF05623.12 ORF94844 - 0.42 10.3 2.9 0.46 10.1 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF789) Sin_N PF04801.13 ORF94844 - 0.44 9.7 7.3 0.45 9.7 7.3 1.1 1 0 0 1 1 1 0 Sin-like protein conserved region Cytomega_UL84 PF06284.11 ORF94844 - 0.47 8.9 2.5 0.48 8.8 2.5 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein VIT1 PF01988.19 ORF94844 - 1.1 9.0 2.1 1.3 8.8 2.1 1.1 1 0 0 1 1 1 0 VIT family Presenilin PF01080.17 ORF94844 - 1.6 7.4 3.0 1.6 7.4 3.0 1.1 1 0 0 1 1 1 0 Presenilin YqfQ PF14181.6 ORF94844 - 5 7.3 9.8 6.4 6.9 9.8 1.1 1 0 0 1 1 1 0 YqfQ-like protein CobT PF06213.12 ORF94844 - 9.1 5.6 15.5 12 5.2 15.5 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Herpes_UL3 PF03369.13 ORF94505 - 9.8 6.7 7.6 3.8 8.1 0.5 2.2 1 1 1 2 2 2 0 Herpesvirus UL3 protein bZIP_2 PF07716.15 ORF93753 - 1.9e-06 27.8 10.1 3.3e-06 27.1 10.1 1.4 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF93753 - 0.0003 20.8 4.9 0.00059 19.9 4.9 1.5 1 0 0 1 1 1 1 bZIP transcription factor BCAS3 PF12490.8 ORF93753 - 0.11 12.0 0.5 0.13 11.8 0.5 1.1 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 RICTOR_M PF14666.6 ORF93488 - 0.13 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain YqfD PF06898.11 ORF93473 - 0.024 13.5 0.5 0.031 13.1 0.5 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD AMOP PF03782.17 ORF93209 - 0.056 13.5 0.0 0.078 13.1 0.0 1.2 1 0 0 1 1 1 0 AMOP domain Cse1 PF08506.10 ORF931 - 0.076 11.8 0.1 0.22 10.3 0.0 1.7 1 1 1 2 2 2 0 Cse1 BetR PF08667.10 ORF931 - 0.08 13.0 0.0 0.09 12.8 0.0 1.3 1 0 0 1 1 1 0 BetR domain bZIP_2 PF07716.15 ORF93030 - 1.9e-06 27.8 10.1 3.3e-06 27.1 10.1 1.4 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF93030 - 0.0003 20.8 4.9 0.00059 19.9 4.9 1.5 1 0 0 1 1 1 1 bZIP transcription factor BCAS3 PF12490.8 ORF93030 - 0.11 12.0 0.5 0.13 11.8 0.5 1.1 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 DUF2524 PF10732.9 ORF92878 - 0.0025 18.1 0.7 0.0035 17.6 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2524) G10 PF01125.17 ORF92878 - 1.4 8.7 13.1 0.057 13.2 7.4 1.6 2 0 0 2 2 2 0 G10 protein zf-MYND PF01753.18 ORF9270 - 0.81 9.8 3.6 1.4 9.0 3.6 1.4 1 0 0 1 1 1 0 MYND finger DUF2890 PF11081.8 ORF92204 - 0.094 12.8 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) Reo_sigmaC_M PF17750.1 ORF91919 - 0.083 12.8 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 Reovirus sigma C capsid protein triple beta spiral SbmA_BacA PF05992.12 ORF9184 - 0.089 12.2 3.7 0.1 12.0 3.7 1.2 1 0 0 1 1 1 0 SbmA/BacA-like family Peptidase_M50 PF02163.22 ORF91530 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Peptidase_M50 PF02163.22 ORF90931 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 TPR_1 PF00515.28 ORF90731 - 6.9e-06 25.7 2.1 7.1e-06 25.6 0.2 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF90731 - 0.00035 20.5 0.6 0.00091 19.2 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF90731 - 0.0018 18.3 1.9 0.011 15.8 0.1 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF90731 - 0.0048 16.6 0.5 0.044 13.5 0.0 2.4 2 0 0 2 2 2 1 TPR repeat Pro_isomerase PF00160.21 ORF90731 - 0.017 15.4 0.1 0.036 14.4 0.1 1.5 1 0 0 1 1 1 0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Lge1 PF11488.8 ORF90731 - 0.055 13.6 1.3 0.09 13.0 1.3 1.4 1 0 0 1 1 1 0 Transcriptional regulatory protein LGE1 Chalcone PF02431.15 ORF90731 - 0.082 12.3 0.4 0.096 12.1 0.4 1.1 1 0 0 1 1 1 0 Chalcone-flavanone isomerase SMN PF06003.12 ORF90731 - 0.12 11.6 5.5 0.11 11.7 4.6 1.4 1 1 0 1 1 1 0 Survival motor neuron protein (SMN) TPR_14 PF13428.6 ORF90731 - 0.22 12.5 0.0 0.35 11.8 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Tad PF13400.6 ORF90642 - 6.2 7.2 8.2 0.47 10.8 1.3 2.1 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like TilS PF09179.11 ORF90587 - 0.0058 17.1 4.8 0.0097 16.4 4.8 1.4 1 0 0 1 1 1 1 TilS substrate binding domain Ribosomal_L21e PF01157.18 ORF9046 - 0.027 14.3 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L21e GHL13 PF14883.6 ORF9046 - 0.051 12.6 0.1 0.053 12.6 0.1 1.1 1 0 0 1 1 1 0 Hypothetical glycosyl hydrolase family 13 Peptidase_M50 PF02163.22 ORF90248 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 zf-TRM13_CCCH PF11722.8 ORF90005 - 0.059 13.1 1.9 0.12 12.2 1.0 2.1 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein Peptidase_M50 PF02163.22 ORF89821 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Pkinase PF00069.25 ORF89214 - 3.2e-05 23.4 0.0 4.2e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF4447 PF14590.6 ORF89214 - 0.11 12.3 0.1 0.14 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4447) Glyco_hydro_42C PF08533.10 ORF88830 - 0.041 13.6 0.0 0.073 12.8 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain BslA PF17735.1 ORF88219 - 0.03 14.3 0.0 0.038 14.0 0.0 1.2 1 0 0 1 1 1 0 Biofilm surface layer A ASXH PF13919.6 ORF88219 - 0.15 12.1 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Asx homology domain Rsd_AlgQ PF04353.13 ORF8810 - 0.034 14.1 1.3 0.51 10.3 1.3 2.0 1 1 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Shikimate_dh_N PF08501.11 ORF8810 - 0.08 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain DNA_alkylation PF08713.11 ORF88059 - 3.1e-32 112.1 0.3 3.3e-32 111.9 0.3 1.0 1 0 0 1 1 1 1 DNA alkylation repair enzyme HEAT PF02985.22 ORF88059 - 0.02 15.1 0.2 0.2 12.0 0.0 2.6 3 0 0 3 3 3 0 HEAT repeat RIBIOP_C PF04950.12 ORF87253 - 4.1e-05 23.2 0.8 4.5e-05 23.0 0.8 1.1 1 0 0 1 1 1 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal Ribosomal_L35Ae PF01247.18 ORF87253 - 0.058 13.6 0.1 0.13 12.5 0.0 1.6 1 1 1 2 2 2 0 Ribosomal protein L35Ae UxuA PF03786.13 ORF87175 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF87175 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF87175 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein FAM76 PF16046.5 ORF87087 - 0.0017 17.8 6.3 0.0018 17.7 6.3 1.0 1 0 0 1 1 1 1 FAM76 protein CutA1 PF03091.15 ORF8674 - 5.6e-34 116.0 0.2 6.3e-34 115.8 0.2 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein MFS_1 PF07690.16 ORF86694 - 1.1e-06 27.9 0.7 1.2e-06 27.7 0.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ATP-synt_C PF00137.21 ORF86422 - 4.1e-26 91.1 25.2 2.6e-19 69.3 12.7 2.0 2 0 0 2 2 2 2 ATP synthase subunit C Cry1Ac_D5 PF17997.1 ORF86422 - 0.051 13.4 0.0 0.056 13.3 0.0 1.1 1 0 0 1 1 1 0 Insecticidal delta-endotoxin CryIA(c) domain 5 TssN PF17555.2 ORF86422 - 0.29 10.5 2.9 0.77 9.1 0.1 2.0 1 1 1 2 2 2 0 Type VI secretion system, TssN GerA PF03323.13 ORF86422 - 1.4 7.3 6.5 5.5 5.3 0.4 2.2 2 0 0 2 2 2 0 Bacillus/Clostridium GerA spore germination protein TCR_zetazeta PF11628.8 ORF86422 - 5.2 6.8 11.0 0.99 9.1 3.1 2.3 2 0 0 2 2 2 0 T-cell surface glycoprotein CD3 zeta chain CHIPS PF11434.8 ORF85393 - 0.051 13.4 0.1 0.077 12.8 0.0 1.4 1 1 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS eIF_4EBP PF05456.11 ORF84550 - 0.38 10.7 3.1 1 9.3 0.1 2.1 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Asp PF00026.23 ORF83773 - 3.4e-14 53.0 0.0 3.4e-14 53.0 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease MCR_alpha PF02249.17 ORF83773 - 0.17 12.3 0.6 0.7 10.3 0.0 1.9 1 1 1 2 2 2 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain Yop-YscD_cpl PF16697.5 ORF83206 - 0.025 14.9 0.0 0.045 14.1 0.0 1.4 1 1 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain Pkinase PF00069.25 ORF83080 - 0.0034 16.8 0.0 0.0039 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain EcsB PF05975.12 ORF82958 - 0.0033 16.4 0.3 0.0035 16.3 0.3 1.0 1 0 0 1 1 1 1 Bacterial ABC transporter protein EcsB Cep57_CLD_2 PF14197.6 ORF82812 - 0.028 14.5 1.7 0.053 13.6 1.7 1.4 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 DivIC PF04977.15 ORF82812 - 0.21 11.4 0.1 0.21 11.4 0.1 2.2 3 0 0 3 3 3 0 Septum formation initiator FapA PF03961.13 ORF82812 - 0.58 8.7 3.5 0.65 8.5 3.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4407 PF14362.6 ORF82812 - 8.4 5.7 6.4 9.6 5.5 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4158 PF13700.6 ORF826 - 0.021 14.7 0.3 0.024 14.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) Toxin_19 PF08088.12 ORF8136 - 3.3 7.9 9.4 1.5 9.0 0.8 2.3 1 1 1 2 2 2 0 Conotoxin I-superfamily DUF1834 PF08873.11 ORF8126 - 0.043 13.5 0.0 0.062 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1834) Xrn1_D3 PF18194.1 ORF8126 - 0.045 13.8 0.0 0.075 13.1 0.0 1.3 1 0 0 1 1 1 0 Exoribonuclease 1 Domain-3 Ras PF00071.22 ORF79989 - 7.8e-18 64.6 0.3 9.5e-18 64.3 0.3 1.1 1 0 0 1 1 1 1 Ras family YjzC PF14168.6 ORF79989 - 0.023 15.1 0.2 3.4 8.1 0.0 2.3 2 0 0 2 2 2 0 YjzC-like protein QRPTase_N PF02749.16 ORF79989 - 0.04 14.0 0.0 0.058 13.5 0.0 1.3 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, N-terminal domain HTH_3 PF01381.22 ORF79989 - 0.14 12.2 0.0 0.28 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix Ank_2 PF12796.7 ORF79705 - 1.1e-27 96.4 0.3 1.1e-13 51.6 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF79705 - 9.9e-13 48.0 0.6 2.6e-07 30.8 0.1 2.7 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF79705 - 2.7e-11 43.7 0.1 6.8e-10 39.3 0.0 1.8 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF79705 - 9.9e-11 41.6 0.1 4.2e-06 27.0 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF79705 - 1.8e-10 40.1 0.0 2e-05 24.6 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat DUF937 PF06078.11 ORF79705 - 0.042 14.5 0.8 0.046 14.3 0.8 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF937) DNA_pol_lambd_f PF10391.9 ORF79705 - 0.074 12.9 0.1 0.2 11.5 0.0 1.8 2 0 0 2 2 2 0 Fingers domain of DNA polymerase lambda GHMP_kinases_C PF08544.13 ORF79565 - 9.8e-07 29.1 0.0 1.2e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 GHMP kinases C terminal Peptidase_M50 PF02163.22 ORF79392 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 DUF4119 PF13494.6 ORF79060 - 0.076 13.2 0.1 0.13 12.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF4119) CtsR_C PF17727.1 ORF78034 - 0.075 13.2 0.1 0.17 12.0 0.1 1.6 1 1 0 1 1 1 0 CtsR C-terminal dimerization domain Smr PF01713.21 ORF7727 - 6.9e-10 39.2 0.0 9.6e-10 38.7 0.0 1.2 1 0 0 1 1 1 1 Smr domain DUF5532 PF17673.1 ORF7727 - 0.2 11.7 1.3 0.26 11.4 1.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5532) PQQ PF01011.21 ORF76779 - 0.078 12.9 0.2 0.52 10.3 0.0 2.3 2 0 0 2 2 2 0 PQQ enzyme repeat TonB_dep_Rec PF00593.24 ORF76704 - 7.4e-07 29.4 0.5 7.7e-07 29.3 0.5 1.0 1 0 0 1 1 1 1 TonB dependent receptor DUF2695 PF10905.8 ORF76704 - 0.058 13.6 0.1 0.1 12.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2695) Ribonuc_red_lgC PF02867.15 ORF76574 - 8.9e-09 34.4 0.1 1.2e-08 34.0 0.1 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Gag_p19 PF02228.16 ORF76439 - 0.07 13.6 0.1 0.094 13.2 0.1 1.3 1 0 0 1 1 1 0 Major core protein p19 Peptidase_M50 PF02163.22 ORF76155 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Nif11 PF07862.11 ORF76067 - 0.068 13.5 0.0 5.7 7.3 0.1 2.6 2 1 1 3 3 3 0 Nif11 domain VIT PF08487.10 ORF75489 - 3.6e-12 46.5 0.2 4.5e-12 46.2 0.2 1.1 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain DUF2118 PF09891.9 ORF75489 - 0.041 13.8 0.1 0.049 13.6 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) DUF974 PF06159.13 ORF74946 - 3.4e-06 27.1 0.6 4.1e-06 26.8 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF974) EF-hand_7 PF13499.6 ORF74269 - 3.3e-08 33.9 4.0 0.0015 19.0 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF74269 - 6e-06 25.4 1.7 0.00084 18.7 0.1 3.4 3 2 1 4 4 4 1 EF hand EF-hand_6 PF13405.6 ORF74269 - 1.6e-05 24.5 3.1 0.0023 17.7 0.1 3.0 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF74269 - 0.00023 20.9 2.1 0.00093 19.0 1.3 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_9 PF14658.6 ORF74269 - 0.00026 21.2 0.3 0.012 15.9 0.2 2.3 2 1 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF74269 - 0.0019 17.6 0.1 0.37 10.4 0.1 2.6 2 0 0 2 2 2 1 EF hand eIF3_N PF09440.10 ORF74269 - 0.012 16.1 1.0 0.018 15.5 0.6 1.5 1 1 1 2 2 2 0 eIF3 subunit 6 N terminal domain tRNA_synt_1c_R1 PF04558.15 ORF74269 - 0.012 15.6 0.4 0.015 15.3 0.4 1.1 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 Nucleopor_Nup85 PF07575.13 ORF74269 - 0.065 11.8 0.4 0.098 11.2 0.4 1.3 1 1 0 1 1 1 0 Nup85 Nucleoporin DUF1295 PF06966.12 ORF72258 - 0.0043 16.6 0.0 0.0049 16.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PsiE PF06146.12 ORF72258 - 0.019 15.4 0.2 0.027 14.8 0.2 1.3 1 0 0 1 1 1 0 Phosphate-starvation-inducible E tRNA_bind PF01588.20 ORF70875 - 1.6e-12 47.3 0.3 3.2e-12 46.4 0.1 1.5 2 0 0 2 2 2 1 Putative tRNA binding domain RELT PF12606.8 ORF70322 - 0.21 10.6 0.9 2.5 7.1 0.0 2.1 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 zf-RING_2 PF13639.6 ORF70221 - 0.00063 20.0 7.2 0.0012 19.2 7.2 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF70221 - 0.0033 17.2 7.4 0.0058 16.4 7.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF70221 - 0.0057 16.5 6.4 0.029 14.2 6.4 2.2 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF70221 - 0.063 13.3 4.7 0.15 12.1 4.7 1.7 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_5 PF14634.6 ORF70221 - 0.072 13.1 8.1 0.12 12.3 8.1 1.4 1 0 0 1 1 1 0 zinc-RING finger domain zf-RING_11 PF17123.5 ORF70221 - 0.16 11.7 7.2 0.28 11.0 7.2 1.4 1 0 0 1 1 1 0 RING-like zinc finger Presenilin PF01080.17 ORF68984 - 2.5 6.8 6.8 3 6.5 6.8 1.0 1 0 0 1 1 1 0 Presenilin RRN3 PF05327.11 ORF68984 - 3.3 6.2 6.0 3.2 6.2 6.0 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 TPR_16 PF13432.6 ORF6886 - 0.086 13.5 0.1 0.13 12.9 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat NUC130_3NT PF08158.12 ORF67997 - 0.15 12.4 0.1 0.25 11.7 0.1 1.4 1 0 0 1 1 1 0 NUC130/3NT domain NUDIX PF00293.28 ORF67505 - 1.9e-05 24.7 0.0 2.2e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain Stap_Strp_tox_C PF02876.17 ORF67451 - 0.013 15.8 0.6 0.018 15.3 0.6 1.5 1 1 0 1 1 1 0 Staphylococcal/Streptococcal toxin, beta-grasp domain pKID PF02173.17 ORF65832 - 0.35 10.4 3.1 15 5.1 0.4 2.5 2 0 0 2 2 2 0 pKID domain Peptidase_M50 PF02163.22 ORF65682 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Claudin_2 PF13903.6 ORF65673 - 0.031 14.0 0.3 0.037 13.8 0.3 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction TNFR_16_TM PF18422.1 ORF64736 - 0.46 10.5 1.6 0.79 9.7 1.6 1.4 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain Ribosomal_60s PF00428.19 ORF64248 - 2.2e-18 66.6 7.2 2.6e-18 66.4 7.2 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein Remorin_C PF03763.13 ORF62365 - 0.07 13.0 3.4 0.1 12.5 3.4 1.2 1 0 0 1 1 1 0 Remorin, C-terminal region Glyco_hydro_42C PF08533.10 ORF62307 - 0.041 13.6 0.0 0.073 12.8 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain BTB PF00651.31 ORF6191 - 1.2e-10 41.6 0.5 7.9e-09 35.7 0.1 2.1 1 1 1 2 2 2 2 BTB/POZ domain DUF2180 PF09947.9 ORF60779 - 0.032 14.2 0.1 0.046 13.7 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2180) NPCC PF08058.11 ORF6067 - 0.31 11.1 4.9 0.37 10.8 4.9 1.2 1 0 0 1 1 1 0 Nuclear pore complex component ThiF PF00899.21 ORF6067 - 0.32 10.3 6.3 0.36 10.1 6.3 1.0 1 0 0 1 1 1 0 ThiF family PhyH PF05721.13 ORF60487 - 0.018 15.3 0.0 0.029 14.6 0.0 1.3 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) DUF4106 PF13388.6 ORF6027 - 2.1 7.5 3.8 0.54 9.4 1.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4106) Keratin_B2_2 PF13885.6 ORF60251 - 1.8 8.6 9.5 3.9 7.5 9.5 1.6 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Ribosomal_60s PF00428.19 ORF60105 - 2.2e-18 66.6 7.2 2.6e-18 66.4 7.2 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein Rsd_AlgQ PF04353.13 ORF59594 - 0.034 14.1 1.3 0.51 10.3 1.3 2.0 1 1 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Shikimate_dh_N PF08501.11 ORF59594 - 0.08 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain SWIM PF04434.17 ORF57826 - 2.1 8.1 6.0 0.56 9.9 0.7 2.3 2 0 0 2 2 2 0 SWIM zinc finger DUF4889 PF16230.5 ORF57433 - 0.18 12.1 1.9 0.25 11.6 0.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4889) PaO PF08417.12 ORF57130 - 0.15 12.2 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Pheophorbide a oxygenase Nuc_sug_transp PF04142.15 ORF55721 - 4.3e-10 39.3 0.7 4.4e-10 39.2 0.7 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter ECF-ribofla_trS PF07155.12 ORF55721 - 0.00039 20.5 1.5 0.00049 20.1 1.5 1.1 1 0 0 1 1 1 1 ECF-type riboflavin transporter, S component DUF3481 PF11980.8 ORF55721 - 0.16 11.7 3.6 0.21 11.3 3.6 1.3 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein Adeno_E3_CR2 PF02439.15 ORF55524 - 0.12 12.1 0.4 0.18 11.6 0.4 1.2 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Phage_HK97_TLTM PF06120.11 ORF55524 - 0.19 10.9 6.2 0.84 8.8 5.8 1.8 1 1 0 1 1 1 0 Tail length tape measure protein NUDIX PF00293.28 ORF54858 - 1.8e-10 41.0 0.0 2.1e-10 40.7 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain Sedlin_N PF04628.13 ORF54519 - 2.4e-08 34.2 0.1 2.8e-08 34.0 0.1 1.3 1 1 0 1 1 1 1 Sedlin, N-terminal conserved region LysR_substrate PF03466.20 ORF54047 - 4e-06 26.4 0.1 4.6e-06 26.2 0.1 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Tad PF13400.6 ORF53549 - 6.2 7.2 8.2 0.47 10.8 1.3 2.1 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Mito_carr PF00153.27 ORF53167 - 1.3e-10 41.1 0.1 0.00044 20.1 0.1 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF3789 PF12664.7 ORF53167 - 0.019 14.7 0.7 0.047 13.4 0.7 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3789) CytB6-F_Fe-S PF08802.10 ORF53167 - 0.066 13.2 0.1 0.14 12.2 0.1 1.5 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit Mtf2_C PF14061.6 ORF53167 - 0.12 12.5 2.6 0.51 10.5 0.1 2.5 3 0 0 3 3 3 0 Polycomb-like MTF2 factor 2 DUF2096 PF09869.9 ORF52843 - 0.01 16.0 1.8 0.014 15.5 1.8 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2096) DUF4523 PF15023.6 ORF52843 - 0.055 13.3 2.0 0.062 13.1 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4523) TMPIT PF07851.13 ORF52843 - 0.87 8.8 5.1 1 8.5 5.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF4337 PF14235.6 ORF52843 - 1.4 9.0 4.2 1.5 8.9 3.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) Ribosomal_60s PF00428.19 ORF52180 - 2.2e-18 66.6 7.2 2.6e-18 66.4 7.2 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein RPA43_OB PF17875.1 ORF51658 - 0.17 12.5 6.7 0.27 11.9 6.7 1.2 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I DUF4551 PF15087.6 ORF51658 - 0.49 9.2 5.5 0.57 8.9 5.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) RNA_polI_A34 PF08208.11 ORF51658 - 1.1 9.3 28.9 1.3 9.0 28.9 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Ly49 PF08391.10 ORF51658 - 1.8 9.0 6.2 2.2 8.7 6.2 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region Presenilin PF01080.17 ORF51658 - 4.4 5.9 5.4 5 5.8 5.4 1.0 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 ORF51658 - 5.5 5.7 14.3 6.5 5.4 14.3 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 PPL5 PF18168.1 ORF51658 - 6.8 5.9 10.7 8.2 5.6 10.7 1.1 1 0 0 1 1 1 0 Prim-pol family 5 CDC45 PF02724.14 ORF51658 - 7 4.8 10.7 7.5 4.7 10.7 1.0 1 0 0 1 1 1 0 CDC45-like protein MFS_Mycoplasma PF07672.13 ORF51551 - 0.0033 16.8 2.7 0.004 16.5 2.7 1.1 1 0 0 1 1 1 1 Mycoplasma MFS transporter Peptidase_S49_N PF08496.10 ORF51430 - 1.4 8.9 3.6 1.5 8.9 3.0 1.3 1 1 0 1 1 1 0 Peptidase family S49 N-terminal DUF3959 PF13105.6 ORF51430 - 3.1 7.2 7.4 3.4 7.1 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) zinc_ribbon_9 PF14369.6 ORF50530 - 0.12 12.6 0.0 0.28 11.5 0.0 1.7 1 1 0 1 1 1 0 zinc-ribbon Peptidase_M50 PF02163.22 ORF50460 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Rsd_AlgQ PF04353.13 ORF49531 - 0.034 14.1 1.3 0.51 10.3 1.3 2.0 1 1 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Shikimate_dh_N PF08501.11 ORF49531 - 0.08 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain DUF910 PF06014.11 ORF48775 - 0.028 14.4 0.3 0.11 12.6 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF910) FAM76 PF16046.5 ORF48413 - 0.0017 17.8 6.3 0.0018 17.7 6.3 1.0 1 0 0 1 1 1 1 FAM76 protein Sina PF03145.16 ORF47968 - 0.096 12.6 0.9 0.22 11.4 0.9 1.6 1 1 0 1 1 1 0 Seven in absentia protein family DpaA_N PF16924.5 ORF47624 - 0.019 15.0 0.2 0.028 14.5 0.1 1.4 1 1 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain BSP PF04450.12 ORF47624 - 0.034 13.9 0.2 0.039 13.7 0.2 1.2 1 0 0 1 1 1 0 Peptidase of plants and bacteria DUF3035 PF11233.8 ORF47624 - 0.066 13.5 0.5 0.084 13.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) Jiraiya PF15038.6 ORF46711 - 0.0012 18.4 0.8 0.0014 18.1 0.8 1.1 1 0 0 1 1 1 1 Jiraiya Hanta_G1 PF01567.16 ORF46711 - 0.023 13.4 0.3 0.026 13.2 0.3 1.0 1 0 0 1 1 1 0 Hantavirus glycoprotein G1 Toxin_19 PF08088.12 ORF46476 - 3.3 7.9 9.4 1.5 9.0 0.8 2.3 1 1 1 2 2 2 0 Conotoxin I-superfamily DUF413 PF04219.12 ORF45806 - 6e-39 132.0 0.1 7.1e-39 131.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF Aa_trans PF01490.18 ORF4527 - 0.0017 17.1 4.0 0.0021 16.9 4.0 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Na_Ca_ex PF01699.24 ORF4527 - 0.0052 16.7 2.5 0.0057 16.6 2.5 1.1 1 0 0 1 1 1 1 Sodium/calcium exchanger protein Trp_Tyr_perm PF03222.13 ORF4527 - 0.024 13.7 3.4 0.033 13.2 3.4 1.2 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family Pkinase PF00069.25 ORF4504 - 3.2e-05 23.4 0.0 4.2e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DUF4447 PF14590.6 ORF4504 - 0.1 12.4 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4447) Ank_2 PF12796.7 ORF43821 - 2.7e-22 79.1 0.3 9.9e-17 61.3 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF43821 - 5.5e-19 68.0 6.4 4e-10 39.7 0.5 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF43821 - 3.3e-18 65.2 1.9 7.4e-06 26.2 0.0 3.7 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF43821 - 1.2e-13 49.9 0.0 0.0036 17.7 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF43821 - 5e-13 49.3 0.1 6.4e-07 29.8 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Peptidase_M50 PF02163.22 ORF43289 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 AnfO_nitrog PF09582.10 ORF4248 - 0.12 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) 7tm_7 PF08395.12 ORF42012 - 0.0092 15.2 1.7 0.011 15.0 1.7 1.0 1 0 0 1 1 1 1 7tm Chemosensory receptor Meckelin PF09773.9 ORF40285 - 0.12 10.5 0.7 0.13 10.4 0.7 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) DUF3350 PF11830.8 ORF39902 - 0.12 12.6 6.9 0.26 11.6 1.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3350) Phlebovirus_G2 PF07245.11 ORF39780 - 0.08 11.4 0.2 0.091 11.2 0.2 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G2 Ank_5 PF13857.6 ORF3906 - 0.0003 21.0 0.0 0.00043 20.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF3906 - 0.016 15.7 0.0 0.35 11.4 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat Ank_3 PF13606.6 ORF3906 - 0.095 13.3 0.1 0.28 11.9 0.0 1.7 2 0 0 2 2 2 0 Ankyrin repeat EcsB PF05975.12 ORF37232 - 0.0033 16.4 0.3 0.0035 16.3 0.3 1.0 1 0 0 1 1 1 1 Bacterial ABC transporter protein EcsB Tae4 PF14113.6 ORF36666 - 0.11 12.8 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion system (T6SS), amidase effector protein 4 ERGIC_N PF13850.6 ORF36645 - 0.015 15.7 0.1 0.019 15.3 0.1 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Fijivirus_P9-2 PF06837.11 ORF36645 - 0.02 14.4 1.8 0.026 14.0 1.8 1.3 1 1 0 1 1 1 0 Fijivirus P9-2 protein DinI PF06183.13 ORF36645 - 0.04 14.2 0.0 0.059 13.7 0.0 1.3 1 0 0 1 1 1 0 DinI-like family DUF3198 PF11433.8 ORF36630 - 0.34 10.8 6.1 13 5.8 4.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3198) DUF751 PF05421.11 ORF36237 - 0.0056 17.4 1.0 0.27 12.0 0.2 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF751) Peptidase_S49_N PF08496.10 ORF35994 - 0.19 11.8 1.1 0.19 11.8 1.1 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Pap_E4 PF02711.14 ORF35994 - 3.2 8.8 8.4 1.6 9.7 6.6 1.4 1 1 0 1 1 1 0 E4 protein FlgT_N PF16548.5 ORF35479 - 0.13 12.9 0.4 0.28 11.7 0.1 1.7 2 0 0 2 2 2 0 Flagellar assembly protein T, N-terminal domain RICTOR_M PF14666.6 ORF35164 - 0.13 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain PspA_IM30 PF04012.12 ORF34313 - 0.022 14.3 0.4 0.56 9.8 0.4 1.9 1 1 1 2 2 2 0 PspA/IM30 family SlyX PF04102.12 ORF34313 - 0.062 13.9 0.1 0.23 12.1 0.0 1.8 2 0 0 2 2 2 0 SlyX DUF3114 PF11311.8 ORF34313 - 0.07 12.7 0.0 0.082 12.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3114) HMG_box PF00505.19 ORF34266 - 1.5e-17 63.7 9.4 2e-13 50.6 5.4 2.1 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF34266 - 1.4e-14 54.5 8.4 8e-11 42.4 3.5 2.0 2 0 0 2 2 2 2 HMG-box domain THDPS_N PF14790.6 ORF34266 - 0.018 14.9 1.3 2.9 7.7 0.2 2.1 1 1 1 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal FTCD_C PF04961.12 ORF34266 - 0.19 11.5 2.1 0.22 11.3 2.1 1.1 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase Ureide_permease PF07168.11 ORF34266 - 0.46 9.2 1.1 0.53 9.0 1.1 1.1 1 0 0 1 1 1 0 Ureide permease MFS_1 PF07690.16 ORF3318 - 2.4e-05 23.4 0.0 2.6e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ATP_synt_H PF05493.13 ORF3318 - 0.045 14.2 0.0 0.066 13.7 0.0 1.2 1 0 0 1 1 1 0 ATP synthase subunit H DUF4293 PF14126.6 ORF3318 - 0.051 13.8 0.4 0.076 13.3 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4293) FtsX PF02687.21 ORF3318 - 0.26 11.8 3.5 0.37 11.3 3.5 1.2 1 0 0 1 1 1 0 FtsX-like permease family EFP PF01132.20 ORF33171 - 0.11 12.6 0.7 0.31 11.1 0.3 1.9 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain SnoaL_2 PF12680.7 ORF32661 - 0.00055 20.5 0.2 0.00066 20.3 0.2 1.1 1 0 0 1 1 1 1 SnoaL-like domain Redoxin PF08534.10 ORF32661 - 0.015 15.0 0.0 0.017 14.8 0.0 1.1 1 0 0 1 1 1 0 Redoxin DAGAT PF03982.13 ORF32236 - 0.13 11.1 0.1 0.15 11.0 0.1 1.0 1 0 0 1 1 1 0 Diacylglycerol acyltransferase RRM_1 PF00076.22 ORF32087 - 5.7e-06 26.1 0.0 8.7e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF32087 - 0.0034 17.2 0.0 0.0045 16.8 0.0 1.2 1 0 0 1 1 1 1 Occluded RNA-recognition motif Limkain-b1 PF11608.8 ORF32087 - 0.016 15.3 0.0 0.03 14.4 0.0 1.5 1 1 0 1 1 1 0 Limkain b1 UxuA PF03786.13 ORF31966 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF31966 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF31966 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein MetJ PF01340.20 ORF31866 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Met Apo-repressor, MetJ TOH_N PF12549.8 ORF30460 - 0.083 12.8 4.2 0.3 11.0 0.0 3.2 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal PDZ PF00595.24 ORF29981 - 0.034 14.5 0.0 0.052 13.9 0.0 1.3 1 1 0 1 1 1 0 PDZ domain EFP PF01132.20 ORF29807 - 0.11 12.6 0.7 0.31 11.1 0.3 1.9 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain FAM91_C PF14648.6 ORF295 - 0.001 18.0 1.5 0.0012 17.8 1.5 1.0 1 0 0 1 1 1 1 FAM91 C-terminus Flp1_like PF16982.5 ORF295 - 0.96 8.9 7.0 1.3 8.5 4.7 2.4 1 1 1 2 2 2 0 Putative Flagellin, Flp1-like, domain BUD22 PF09073.10 ORF29074 - 0.019 14.4 15.7 0.02 14.3 15.7 1.0 1 0 0 1 1 1 0 BUD22 NOA36 PF06524.12 ORF29074 - 0.068 12.5 15.0 0.065 12.5 15.0 1.1 1 0 0 1 1 1 0 NOA36 protein Suf PF05843.14 ORF29074 - 0.18 11.7 7.1 0.27 11.2 7.1 1.3 1 1 0 1 1 1 0 Suppressor of forked protein (Suf) DUF2457 PF10446.9 ORF29074 - 0.93 8.6 18.4 0.92 8.6 18.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Pes-10 PF07149.11 ORF29074 - 0.93 8.5 15.7 0.98 8.4 15.7 1.1 1 0 0 1 1 1 0 Pes-10 PPP4R2 PF09184.11 ORF29074 - 2.1 7.8 16.0 2.3 7.7 16.0 1.0 1 0 0 1 1 1 0 PPP4R2 CDC45 PF02724.14 ORF29074 - 3.9 5.7 13.6 3.7 5.7 13.6 1.1 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 ORF29074 - 4 5.5 19.1 4.1 5.5 19.1 1.0 1 0 0 1 1 1 0 Nop14-like family Presenilin PF01080.17 ORF29074 - 8.1 5.1 4.9 8 5.1 4.9 1.0 1 0 0 1 1 1 0 Presenilin RRM_1 PF00076.22 ORF28895 - 2e-11 43.5 0.0 2.5e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) EB PF01683.18 ORF28178 - 0.017 15.4 8.3 0.16 12.3 0.1 2.5 1 1 1 2 2 2 0 EB module FlgT_N PF16548.5 ORF27752 - 0.13 12.9 0.4 0.28 11.7 0.1 1.7 2 0 0 2 2 2 0 Flagellar assembly protein T, N-terminal domain ANAPC4_WD40 PF12894.7 ORF26722 - 3.9e-05 23.9 0.0 5.1e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Cytochrom_B559 PF00283.19 ORF26722 - 0.037 13.5 0.1 0.066 12.7 0.1 1.4 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits MORN PF02493.20 ORF26701 - 0.004 16.9 1.6 0.018 14.9 0.0 2.8 3 0 0 3 3 3 1 MORN repeat DUF4816 PF16086.5 ORF26701 - 0.024 14.6 1.0 0.024 14.6 1.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4816) TRAP_alpha PF03896.16 ORF26540 - 0.033 13.4 0.0 0.045 13.0 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit GCFC PF07842.12 ORF26244 - 1.7e-12 47.6 2.9 1.7e-12 47.6 2.9 1.9 2 0 0 2 2 2 1 GC-rich sequence DNA-binding factor-like protein adh_short PF00106.25 ORF25409 - 5.9e-18 65.0 0.0 6.9e-18 64.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF25409 - 1e-09 38.3 0.0 1.1e-09 38.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Peptidase_M50 PF02163.22 ORF25342 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 MgtE PF01769.16 ORF24388 - 0.61 10.5 10.3 0.75 10.2 10.3 1.1 1 0 0 1 1 1 0 Divalent cation transporter ThrE PF06738.12 ORF24388 - 1.3 8.4 21.6 1.7 8.0 21.6 1.2 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF1189 PF06691.11 ORF24388 - 3.1 7.3 6.0 3.9 7.0 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) FAM193_C PF15914.5 ORF23998 - 0.32 10.8 1.3 0.5 10.1 0.3 1.8 2 0 0 2 2 2 0 FAM193 family C-terminal FXa_inhibition PF14670.6 ORF23419 - 0.82 10.0 8.8 1.8 8.9 6.3 2.3 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site EF-hand_7 PF13499.6 ORF23221 - 1.9e-16 60.2 5.1 4.7e-12 46.2 0.4 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF23221 - 3.1e-12 45.1 2.0 3.6e-05 23.0 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF23221 - 5.3e-12 44.6 1.6 5.7e-05 22.7 0.0 3.0 2 1 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF23221 - 4.4e-07 29.1 4.2 0.0012 18.3 0.2 2.7 2 0 0 2 2 2 2 EF hand EF-hand_10 PF14788.6 ORF23221 - 2.2e-06 27.4 1.0 0.016 15.0 0.0 2.4 2 1 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF23221 - 0.00014 21.6 4.1 0.023 14.6 0.2 2.4 1 1 1 2 2 2 2 EF-hand domain pair ATP-cone PF03477.16 ORF23221 - 0.018 15.6 0.3 0.036 14.6 0.1 1.6 2 0 0 2 2 2 0 ATP cone domain SGS PF05002.15 ORF23221 - 0.031 14.4 0.9 0.36 11.0 1.1 2.2 1 1 0 2 2 2 0 SGS domain DUF2267 PF10025.9 ORF23221 - 0.035 14.4 0.0 0.095 13.0 0.0 1.9 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) Diphthami_syn_2 PF01902.17 ORF23221 - 0.038 13.5 0.2 0.043 13.3 0.2 1.4 1 1 0 1 1 1 0 Diphthamide synthase DUF4942 PF13708.6 ORF23221 - 0.061 13.3 0.2 0.2 11.6 0.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4942) Gar1 PF04410.14 ORF22905 - 9.7e-06 25.4 2.2 9.7e-06 25.4 2.2 1.7 1 1 1 2 2 2 1 Gar1/Naf1 RNA binding region US6 PF17616.2 ORF22905 - 0.035 14.1 0.9 0.038 13.9 0.9 1.1 1 0 0 1 1 1 0 Viral unique short region 6 DUF5301 PF17225.3 ORF22905 - 0.039 14.4 4.6 0.05 14.0 4.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5300) FYRC PF05965.14 ORF22905 - 0.045 13.9 0.6 0.074 13.2 0.6 1.3 1 0 0 1 1 1 0 F/Y rich C-terminus PTPRCAP PF15713.5 ORF22905 - 0.075 13.3 1.8 0.083 13.2 1.8 1.1 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Peptidase_S49_N PF08496.10 ORF22905 - 1.1 9.4 8.1 1.3 9.0 8.1 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Cyclin_N PF00134.23 ORF22528 - 1.4e-06 28.1 0.3 0.04 13.7 0.0 2.1 2 0 0 2 2 2 2 Cyclin, N-terminal domain PIG-H PF10181.9 ORF22381 - 0.17 11.8 0.0 0.43 10.5 0.0 1.6 1 1 1 2 2 2 0 GPI-GlcNAc transferase complex, PIG-H component Pox_T4_C PF04490.12 ORF2148 - 0.0086 16.2 0.3 0.0092 16.2 0.3 1.1 1 0 0 1 1 1 1 Poxvirus T4 protein, C terminus Nucleo_LEF-12 PF06256.11 ORF2148 - 0.016 15.0 0.0 0.017 14.9 0.0 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus LEF-12 protein DNase-RNase PF02577.14 ORF21167 - 0.012 15.2 0.2 0.015 14.9 0.2 1.2 1 0 0 1 1 1 0 Bifunctional nuclease UxuA PF03786.13 ORF20979 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF20979 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF20979 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Peptidase_M50 PF02163.22 ORF20028 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 SOGA PF11365.8 ORF19322 - 0.063 14.4 5.2 0.091 13.9 5.2 1.4 1 1 0 1 1 1 0 Protein SOGA Spc24 PF08286.11 ORF19322 - 0.51 10.6 5.3 5.8 7.2 1.7 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Nup88 PF10168.9 ORF19322 - 0.53 8.0 6.2 0.6 7.8 6.2 1.0 1 0 0 1 1 1 0 Nuclear pore component DUF4893 PF16233.5 ORF18597 - 0.081 12.5 2.0 4.5 6.8 0.0 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4893) DUF3861 PF12977.7 ORF18511 - 0.09 12.9 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3861) DUF2583 PF10762.9 ORF18279 - 0.018 15.4 0.1 0.029 14.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2583) Ribosomal_60s PF00428.19 ORF18264 - 2.2e-18 66.6 7.2 2.6e-18 66.4 7.2 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein AbiEi_3 PF11459.8 ORF1788 - 0.053 13.2 0.0 4.2 7.1 0.0 2.0 1 1 1 2 2 2 0 Transcriptional regulator, AbiEi antitoxin, Type IV TA system DUF3139 PF11337.8 ORF17856 - 0.015 15.9 2.5 0.019 15.6 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) ABC2_membrane_5 PF13346.6 ORF17856 - 0.089 12.3 0.5 0.12 11.9 0.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Bac_export_2 PF01312.19 ORF17826 - 0.023 13.9 0.8 0.026 13.7 0.8 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family EbsA PF17255.2 ORF17826 - 0.039 14.3 3.2 0.068 13.5 3.2 1.4 1 1 0 1 1 1 0 EbsA-like protein Glyco_hydro_17 PF00332.18 ORF15952 - 0.0046 16.6 0.0 0.0058 16.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 17 DUF4038 PF13204.6 ORF14184 - 0.054 13.1 0.0 0.061 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4038) Mito_morph_reg PF14972.6 ORF13658 - 0.12 11.9 0.8 0.13 11.9 0.8 1.2 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator Peptidase_M50 PF02163.22 ORF12657 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Phage_holin_3_3 PF16083.5 ORF12381 - 0.099 12.8 0.4 0.3 11.2 0.1 1.8 2 0 0 2 2 2 0 LydA holin phage, holin superfamily III DcuC PF03606.15 ORF12046 - 0.0075 14.8 0.3 0.0086 14.6 0.3 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier DUF2663 PF10864.8 ORF12046 - 0.089 13.2 3.2 0.059 13.8 1.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2663) YabA PF06156.13 ORF112262 - 0.00011 22.8 7.4 0.00011 22.8 7.4 2.0 1 1 1 2 2 2 1 Initiation control protein YabA ZapB PF06005.12 ORF112262 - 0.017 15.5 8.8 0.017 15.5 8.8 2.4 1 1 1 2 2 2 0 Cell division protein ZapB COG2 PF06148.11 ORF112262 - 0.53 10.4 10.9 0.04 14.0 4.2 2.0 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Ubiquitin_4 PF18036.1 ORF112262 - 1 9.4 7.3 0.55 10.3 0.5 2.4 1 1 1 2 2 2 0 Ubiquitin-like domain BRE1 PF08647.11 ORF112262 - 1.1 9.4 21.5 0.66 10.1 9.6 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase APG6_N PF17675.1 ORF112262 - 1.3 9.6 18.4 1.1 9.8 7.9 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF3435 PF11917.8 ORF112262 - 1.4 7.8 8.8 1.6 7.5 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Allexi_40kDa PF05549.11 ORF112262 - 1.6 8.1 7.9 1.9 7.9 7.9 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF883 PF05957.13 ORF112262 - 2.4 8.8 5.0 5.9 7.6 0.3 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Spc24 PF08286.11 ORF112262 - 6.2 7.1 15.8 85 3.5 15.8 2.0 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 RICTOR_M PF14666.6 ORF110476 - 0.13 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain bZIP_2 PF07716.15 ORF109923 - 1.9e-06 27.8 10.1 3.3e-06 27.1 10.1 1.4 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF109923 - 0.0003 20.8 4.9 0.00059 19.9 4.9 1.5 1 0 0 1 1 1 1 bZIP transcription factor BCAS3 PF12490.8 ORF109923 - 0.11 12.0 0.5 0.13 11.8 0.5 1.1 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 Peptidase_S30 PF01577.16 ORF109877 - 3.9 7.0 10.1 2 8.0 6.8 1.8 1 1 1 2 2 2 0 Potyvirus P1 protease TRAP_alpha PF03896.16 ORF109760 - 0.033 13.4 0.0 0.045 13.0 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Peptidase_M50 PF02163.22 ORF109690 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 P-II PF00543.22 ORF108568 - 3.8e-41 139.8 1.2 4.3e-41 139.7 1.2 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF3240 PF11582.8 ORF108568 - 0.12 12.5 0.0 0.2 11.8 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3240) GRIP PF01465.20 ORF108459 - 0.022 14.7 0.3 0.036 14.0 0.3 1.4 1 0 0 1 1 1 0 GRIP domain NDUFB11 PF17250.2 ORF108459 - 0.047 14.3 0.0 0.079 13.6 0.0 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase 11 kDa subunit YqfD PF06898.11 ORF108310 - 0.024 13.5 0.5 0.031 13.1 0.5 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD Ribosomal_S3_C PF00189.20 ORF106235 - 2.4e-17 63.2 1.8 3e-17 62.9 1.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain DUF3112 PF11309.8 ORF105979 - 0.012 15.1 1.1 0.014 14.9 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) DUF4889 PF16230.5 ORF105847 - 0.18 12.1 1.9 0.25 11.6 0.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4889) Acetyltransf_11 PF13720.6 ORF105186 - 0.021 15.3 1.2 0.03 14.8 1.2 1.3 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 UxuA PF03786.13 ORF104983 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF104983 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF104983 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Peptidase_M50 PF02163.22 ORF104888 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 DUF4558 PF15104.6 ORF104458 - 1.2e-19 70.2 10.8 1.5e-19 69.8 10.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4558) CshA_NR2 PF18651.1 ORF104458 - 0.032 13.5 1.4 0.045 13.0 0.9 1.4 1 1 1 2 2 2 0 Surface adhesin CshA non-repetitive domain 2 Acetyltransf_2 PF00797.17 ORF104154 - 0.082 12.7 0.0 0.093 12.5 0.0 1.1 1 0 0 1 1 1 0 N-acetyltransferase Pox_A14 PF05767.12 ORF104051 - 0.15 12.2 2.0 12 6.2 0.1 2.3 2 1 0 2 2 2 0 Poxvirus virion envelope protein A14 zf-Tim10_DDP PF02953.15 ORF103796 - 0.0015 18.2 2.7 0.0023 17.5 2.7 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger VATC PF18716.1 ORF103796 - 0.063 13.1 1.3 0.063 13.1 1.3 1.6 2 0 0 2 2 2 0 Vms1-associating treble clef domain Granulin PF00396.18 ORF103524 - 0.4 11.0 12.4 0.74 10.2 4.0 2.5 1 1 1 2 2 2 0 Granulin zf-RanBP PF00641.18 ORF102628 - 6.3e-06 25.4 1.1 1.5e-05 24.2 1.1 1.7 1 1 0 1 1 1 1 Zn-finger in Ran binding protein and others CCB2_CCB4 PF11152.8 ORF102332 - 0.11 11.7 0.1 0.13 11.5 0.1 1.2 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B, CCB2/CCB4 DSPc PF00782.20 ORF101809 - 2.2e-23 82.5 0.3 2.5e-23 82.3 0.3 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF101809 - 0.0014 18.3 0.0 0.0014 18.3 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Init_tRNA_PT PF04179.12 ORF101809 - 0.017 15.4 0.0 0.022 15.1 0.0 1.2 1 0 0 1 1 1 0 Rit1 DUSP-like domain PTPlike_phytase PF14566.6 ORF101809 - 0.022 14.9 0.0 0.028 14.6 0.0 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate CDKN3 PF05706.12 ORF101809 - 0.028 14.1 0.0 0.039 13.6 0.0 1.2 1 1 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Rsbr_N PF08678.10 ORF101039 - 0.062 13.4 0.1 0.14 12.3 0.1 1.6 1 1 0 1 1 1 0 Rsbr N terminal Plasmod_dom_1 PF09715.10 ORF100355 - 0.16 12.1 0.6 0.3 11.2 0.1 1.8 2 0 0 2 2 2 0 Plasmodium protein of unknown function (Plasmod_dom_1) EF-hand_7 PF13499.6 ORF100270 - 1.9e-16 60.2 5.1 4.7e-12 46.2 0.4 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF100270 - 3.1e-12 45.1 2.0 3.6e-05 23.0 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF100270 - 5.3e-12 44.6 1.6 5.7e-05 22.7 0.0 3.0 2 1 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF100270 - 4.4e-07 29.1 4.2 0.0012 18.3 0.2 2.7 2 0 0 2 2 2 2 EF hand EF-hand_10 PF14788.6 ORF100270 - 2.2e-06 27.4 1.0 0.016 15.0 0.0 2.4 2 1 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF100270 - 0.00014 21.6 4.1 0.023 14.6 0.2 2.4 1 1 1 2 2 2 2 EF-hand domain pair ATP-cone PF03477.16 ORF100270 - 0.018 15.6 0.3 0.036 14.6 0.1 1.6 2 0 0 2 2 2 0 ATP cone domain SGS PF05002.15 ORF100270 - 0.031 14.4 0.9 0.36 11.0 1.1 2.2 1 1 0 2 2 2 0 SGS domain DUF2267 PF10025.9 ORF100270 - 0.035 14.4 0.0 0.095 13.0 0.0 1.9 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) Diphthami_syn_2 PF01902.17 ORF100270 - 0.038 13.5 0.2 0.043 13.3 0.2 1.4 1 1 0 1 1 1 0 Diphthamide synthase DUF4942 PF13708.6 ORF100270 - 0.061 13.3 0.2 0.2 11.6 0.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4942) RICTOR_M PF14666.6 ORF100070 - 0.13 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain DUF4804 PF16062.5 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.0034 16.3 0.1 0.0038 16.1 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4804) ABC_membrane_3 PF13748.6 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.0059 15.9 0.4 0.0073 15.6 0.4 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region BRE1 PF08647.11 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.0097 16.0 0.5 0.014 15.4 0.5 1.4 1 1 0 1 1 1 1 BRE1 E3 ubiquitin ligase Noelin-1 PF12308.8 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.031 14.2 0.4 0.043 13.8 0.4 1.3 1 0 0 1 1 1 0 Neurogenesis glycoprotein Med4 PF10018.9 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.054 13.2 3.6 0.099 12.3 3.6 1.3 1 1 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 ArnB_C PF18677.1 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.056 13.6 0.0 0.12 12.5 0.0 1.5 1 1 0 1 1 1 0 Archaellum regulatory network B, C-terminal domain DUF2935 PF11155.8 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.088 13.1 1.1 0.15 12.4 0.4 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) DUF4282 PF14110.6 NODE_53422_length_331_cov_1.331081_g45496_i0reverse_frame_1 - 0.045 14.5 0.1 0.066 13.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) NotI PF12183.8 NODE_53420_length_331_cov_1.746622_g45494_i0forward_frame_1 - 0.02 14.2 0.4 0.022 14.1 0.4 1.1 1 0 0 1 1 1 0 Restriction endonuclease NotI SRA PF18491.1 NODE_53419_length_331_cov_1.834459_g45493_i0reverse_frame_1 - 0.021 14.9 0.3 0.023 14.8 0.3 1.1 1 0 0 1 1 1 0 SET and RING associated domain Cys_rich_KTR PF14205.6 NODE_53418_length_331_cov_1.881757_g45492_i0reverse_frame_1 - 0.0032 17.2 0.1 0.0068 16.2 0.1 1.5 1 0 0 1 1 1 1 Cysteine-rich KTR YppF PF14178.6 NODE_53417_length_331_cov_1.888514_g45491_i0forward_frame_1 - 0.00065 19.5 0.5 0.0013 18.6 0.5 1.6 1 0 0 1 1 1 1 YppF-like protein IU_nuc_hydro PF01156.19 NODE_53414_length_331_cov_2.064189_g45488_i0forward_frame_1 - 1e-25 91.0 0.0 1.2e-25 90.8 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase HTH_28 PF13518.6 NODE_53410_length_331_cov_2.216216_g45484_i0forward_frame_1 - 0.061 13.5 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF5345 PF17280.2 NODE_53396_length_331_cov_3.449324_g45470_i0reverse_frame_1 - 0.98 9.4 4.3 0.36 10.8 0.2 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5345) DUF3810 PF12725.7 NODE_53396_length_331_cov_3.449324_g45470_i0forward_frame_1 - 0.51 9.6 4.2 0.54 9.5 4.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) JIP_LZII PF16471.5 NODE_53384_length_331_cov_60.320946_g45458_i0forward_frame_1 - 2.8e-05 24.2 11.1 2.8e-05 24.2 11.1 2.1 1 1 1 2 2 2 1 JNK-interacting protein leucine zipper II Cluap1 PF10234.9 NODE_53384_length_331_cov_60.320946_g45458_i0forward_frame_1 - 0.0037 16.7 9.4 0.0042 16.5 9.4 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 Exonuc_VII_L PF02601.15 NODE_53384_length_331_cov_60.320946_g45458_i0forward_frame_1 - 2.4 7.6 7.5 3 7.4 7.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit FapA PF03961.13 NODE_53384_length_331_cov_60.320946_g45458_i0forward_frame_1 - 2.4 6.6 13.6 2.8 6.4 13.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF3333 PF11812.8 NODE_53383_length_331_cov_61.959459_g45457_i0reverse_frame_1 - 0.0012 19.0 0.4 0.0015 18.7 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3333) SieB PF14163.6 NODE_53383_length_331_cov_61.959459_g45457_i0reverse_frame_1 - 0.059 12.9 1.7 0.077 12.5 1.6 1.3 1 1 0 1 1 1 0 Super-infection exclusion protein B DUF2789 PF10982.8 NODE_53383_length_331_cov_61.959459_g45457_i0reverse_frame_1 - 0.13 12.5 0.1 0.26 11.5 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2789) Glyco_transf_25 PF01755.17 NODE_53378_length_331_cov_75.472973_g45452_i0reverse_frame_1 - 0.0056 16.6 0.0 0.011 15.6 0.0 1.5 2 0 0 2 2 2 1 Glycosyltransferase family 25 (LPS biosynthesis protein) TetR PF13972.6 NODE_53370_length_331_cov_91.253378_g45444_i0forward_frame_1 - 0.0047 16.6 0.1 0.0057 16.4 0.1 1.2 1 0 0 1 1 1 1 Bacterial transcriptional repressor SF3A3 PF16837.5 NODE_53370_length_331_cov_91.253378_g45444_i0forward_frame_1 - 1.9 9.1 6.0 10 6.7 6.0 2.0 1 1 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 DUF4131 PF13567.6 NODE_53365_length_331_cov_117.766892_g45439_i0forward_frame_1 - 0.47 10.1 4.0 0.39 10.3 3.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) GlcNAc PF11397.8 NODE_53359_length_331_cov_221.108108_g45433_i0reverse_frame_1 - 0.025 14.1 0.5 0.029 13.8 0.5 1.0 1 0 0 1 1 1 0 Glycosyltransferase (GlcNAc) PAGK PF15284.6 NODE_53356_length_331_cov_514.780405_g45430_i0reverse_frame_1 - 0.2 11.6 0.3 0.33 10.9 0.1 1.5 2 0 0 2 2 2 0 Phage-encoded virulence factor DUF4799 PF16056.5 NODE_53353_length_331_cov_814.297297_g45427_i0reverse_frame_1 - 0.032 13.4 0.2 0.037 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4799) SBP56 PF05694.11 NODE_53349_length_331_cov_7976.530405_g45423_i0reverse_frame_1 - 0.18 10.6 0.3 0.21 10.4 0.3 1.1 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) Ammonium_transp PF00909.21 NODE_53349_length_331_cov_7976.530405_g45423_i0forward_frame_1 - 4.2e-07 29.0 0.0 5e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family Ribosomal_L24e PF01246.20 NODE_53341_length_332_cov_1.818182_g45415_i0reverse_frame_1 - 0.14 12.4 2.3 0.42 10.9 2.3 1.7 1 0 0 1 1 1 0 Ribosomal protein L24e FBA_2 PF07735.17 NODE_53335_length_332_cov_2.094276_g45409_i0forward_frame_1 - 0.0094 16.1 1.9 0.0094 16.1 1.9 2.2 1 1 1 2 2 2 2 F-box associated zf-CCCH PF00642.24 NODE_53332_length_332_cov_2.239057_g45406_i0forward_frame_1 - 5.1e-06 26.3 1.0 5.1e-06 26.3 1.0 1.9 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_53332_length_332_cov_2.239057_g45406_i0forward_frame_1 - 0.11 12.6 2.9 0.2 11.7 1.1 2.2 2 0 0 2 2 2 0 Zinc finger domain zf-CCCH_2 PF14608.6 NODE_53332_length_332_cov_2.239057_g45406_i0forward_frame_1 - 0.76 10.3 0.2 0.76 10.3 0.2 3.1 3 1 0 3 3 3 0 RNA-binding, Nab2-type zinc finger cNMP_binding PF00027.29 NODE_53331_length_332_cov_2.282828_g45405_i0reverse_frame_1 - 5.6e-06 26.3 0.0 7.7e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF1830 PF08865.11 NODE_53331_length_332_cov_2.282828_g45405_i0reverse_frame_1 - 0.056 13.5 1.3 0.27 11.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1830) RepA1_leader PF08048.12 NODE_53315_length_332_cov_3.494949_g45390_i0forward_frame_1 - 0.15 12.4 1.5 0.33 11.3 0.1 2.2 2 0 0 2 2 2 0 Tap RepA1 leader peptide DUF3251 PF11622.8 NODE_53313_length_332_cov_4.518519_g45388_i0forward_frame_1 - 1.6e-26 92.9 0.1 2.8e-26 92.1 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3251) zf-C2HC5 PF06221.13 NODE_53313_length_332_cov_4.518519_g45388_i0forward_frame_1 - 0.028 14.4 0.2 0.045 13.8 0.2 1.3 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type Lem_TRP PF08262.11 NODE_53312_length_332_cov_4.582492_g45387_i0forward_frame_1 - 3.1 8.0 0.0 3.1 8.0 0.0 4.0 3 1 0 3 3 3 0 Leucophaea maderae tachykinin-related peptide Lamprin PF06403.11 NODE_53312_length_332_cov_4.582492_g45387_i0forward_frame_1 - 4.1 7.4 18.8 0.48 10.4 6.0 2.1 1 1 1 2 2 2 0 Lamprin Pkinase PF00069.25 NODE_53310_length_332_cov_12.377104_g45385_i0forward_frame_1 - 7.4e-05 22.2 0.2 9.1e-05 21.9 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF2700 PF10912.8 NODE_53300_length_332_cov_53.090909_g45375_i0reverse_frame_1 - 0.003 17.6 1.8 0.0031 17.5 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2700) Mrx7 PF10906.8 NODE_53297_length_332_cov_62.841751_g45372_i0forward_frame_1 - 0.031 14.5 0.1 0.12 12.7 0.0 1.8 2 0 0 2 2 2 0 MIOREX complex component 7 TMEM208_SND2 PF05620.11 NODE_53295_length_332_cov_70.764310_g45370_i0reverse_frame_1 - 0.96 9.2 4.7 1.3 8.8 4.7 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 FPN1 PF06963.12 NODE_53294_length_332_cov_77.414141_g45369_i0reverse_frame_1 - 0.21 10.1 0.3 0.28 9.7 0.3 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) Dak2 PF02734.17 NODE_53287_length_332_cov_94.154882_g45362_i0forward_frame_1 - 0.16 11.8 0.0 0.19 11.6 0.0 1.0 1 0 0 1 1 1 0 DAK2 domain FSH1 PF03959.13 NODE_53285_length_332_cov_105.181818_g45360_i0forward_frame_1 - 1.5e-11 44.4 0.0 1.7e-11 44.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase (FSH1) DUF2547 PF10818.8 NODE_53280_length_332_cov_131.222222_g45355_i0reverse_frame_1 - 0.081 13.9 0.1 0.1 13.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) cNMP_binding PF00027.29 NODE_53270_length_332_cov_207.212121_g45345_i0reverse_frame_1 - 0.006 16.6 0.2 0.019 15.0 0.1 1.8 2 1 1 3 3 3 1 Cyclic nucleotide-binding domain Hormone_1 PF00103.20 NODE_53270_length_332_cov_207.212121_g45345_i0reverse_frame_1 - 0.027 14.2 2.4 0.035 13.8 2.0 1.3 1 1 0 1 1 1 0 Somatotropin hormone family Sec2p PF06428.11 NODE_53270_length_332_cov_207.212121_g45345_i0reverse_frame_1 - 0.049 13.6 1.1 0.049 13.6 1.1 1.9 2 0 0 2 2 2 0 GDP/GTP exchange factor Sec2p Spo7_2_N PF15407.6 NODE_53270_length_332_cov_207.212121_g45345_i0reverse_frame_1 - 0.087 12.5 0.1 0.087 12.5 0.1 2.0 2 1 1 3 3 3 0 Sporulation protein family 7 zf-CHY PF05495.12 NODE_53270_length_332_cov_207.212121_g45345_i0forward_frame_1 - 0.13 12.7 0.8 0.13 12.7 0.8 1.9 2 0 0 2 2 2 0 CHY zinc finger FixQ PF05545.11 NODE_53270_length_332_cov_207.212121_g45345_i0forward_frame_1 - 9.1 6.3 13.1 0.55 10.2 2.4 2.2 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ SANTA PF09133.10 NODE_53265_length_332_cov_318.296296_g45340_i0forward_frame_1 - 0.11 13.0 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 SANTA (SANT Associated) zf-Tim10_DDP PF02953.15 NODE_53264_length_332_cov_408.117845_g45339_i0reverse_frame_1 - 0.0053 16.4 0.0 0.0071 16.0 0.0 1.2 1 0 0 1 1 1 1 Tim10/DDP family zinc finger DUF1682 PF07946.14 NODE_53262_length_332_cov_646.343434_g45337_i0reverse_frame_1 - 0.059 12.6 8.3 0.063 12.5 8.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Connexin PF00029.19 NODE_53262_length_332_cov_646.343434_g45337_i0reverse_frame_1 - 0.13 12.0 1.8 0.15 11.8 1.8 1.2 1 0 0 1 1 1 0 Connexin ALMT PF11744.8 NODE_53262_length_332_cov_646.343434_g45337_i0reverse_frame_1 - 6.8 5.4 7.4 7 5.4 7.4 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter 7tm_3 PF00003.22 NODE_53262_length_332_cov_646.343434_g45337_i0forward_frame_1 - 0.07 12.8 5.2 0.07 12.8 5.2 1.1 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks210.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks210.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks210.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks210.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Mit_proteolip PF08039.11 NODE_53253_length_333_cov_1.197987_g45328_i0forward_frame_1 - 0.0083 16.5 0.3 0.014 15.8 0.3 1.5 1 0 0 1 1 1 1 Mitochondrial proteolipid AAA_8 PF12780.7 NODE_53248_length_333_cov_1.540268_g45323_i0forward_frame_1 - 1.1e-05 24.9 0.0 1.3e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 DUF1582 PF07621.11 NODE_53246_length_333_cov_1.580537_g45321_i0reverse_frame_1 - 0.026 14.4 0.3 0.06 13.3 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1582) Barwin PF00967.17 NODE_53246_length_333_cov_1.580537_g45321_i0forward_frame_1 - 0.074 12.9 0.3 0.1 12.5 0.3 1.2 1 0 0 1 1 1 0 Barwin family RTP1_C1 PF10363.9 NODE_53235_length_333_cov_1.936242_g45310_i0forward_frame_1 - 0.081 13.1 0.6 0.11 12.7 0.6 1.3 1 1 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF2700 PF10912.8 NODE_53227_length_333_cov_2.258389_g45302_i0forward_frame_1 - 0.0017 18.4 0.5 0.0021 18.1 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2700) DUF4345 PF14248.6 NODE_53222_length_333_cov_2.442953_g45297_i0forward_frame_1 - 0.058 13.3 0.1 0.093 12.6 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4345) PilS PF08805.11 NODE_53218_length_333_cov_2.536913_g45293_i0reverse_frame_1 - 0.18 11.6 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 PilS N terminal DUF4345 PF14248.6 NODE_53216_length_333_cov_2.577181_g45291_i0forward_frame_1 - 0.074 13.0 0.1 0.12 12.3 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4345) DUF5594 PF18057.1 NODE_53212_length_333_cov_2.775168_g45287_i0reverse_frame_1 - 0.13 12.1 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5594) ubiquitin PF00240.23 NODE_53207_length_333_cov_3.328859_g45282_i0reverse_frame_1 - 6.9e-09 35.3 0.1 1.2e-08 34.6 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_53207_length_333_cov_3.328859_g45282_i0reverse_frame_1 - 0.02 14.7 0.1 0.03 14.2 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 NODE_53207_length_333_cov_3.328859_g45282_i0reverse_frame_1 - 0.045 14.1 0.0 0.057 13.8 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-like domain Ubiquitin_4 PF18036.1 NODE_53207_length_333_cov_3.328859_g45282_i0reverse_frame_1 - 0.091 12.8 0.1 1.8 8.7 0.1 2.1 1 1 0 1 1 1 0 Ubiquitin-like domain CSN5_C PF18323.1 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.066 14.1 5.6 0.11 13.4 5.6 1.4 1 1 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain DUF1664 PF07889.12 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.08 13.0 5.4 0.095 12.7 4.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) CENP-F_leu_zip PF10473.9 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.095 12.7 14.1 0.36 10.9 14.1 1.7 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IL15 PF02372.15 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.1 12.6 4.8 0.13 12.3 4.8 1.2 1 0 0 1 1 1 0 Interleukin 15 Syntaxin_2 PF14523.6 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.27 11.6 8.9 0.39 11.1 8.9 1.3 1 0 0 1 1 1 0 Syntaxin-like protein APG6_N PF17675.1 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.42 11.1 16.4 1.5 9.4 16.4 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF3340 PF11818.8 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.52 10.5 12.0 1 9.5 12.0 1.5 1 1 0 1 1 1 0 C-terminal domain of tail specific protease (DUF3340) DUF948 PF06103.11 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 1.4 9.3 3.9 18 5.7 0.9 2.1 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) FlxA PF14282.6 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 1.4 8.9 9.3 0.11 12.6 1.5 2.1 2 0 0 2 2 2 0 FlxA-like protein DUF349 PF03993.12 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 3 8.2 10.9 22 5.4 9.8 2.2 1 1 1 2 2 2 0 Domain of Unknown Function (DUF349) YabA PF06156.13 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 6.7 7.4 10.9 5.8 7.6 2.3 2.1 1 1 1 2 2 2 0 Initiation control protein YabA Spem1 PF15670.5 NODE_53199_length_333_cov_37.926174_g45274_i0reverse_frame_1 - 0.068 12.7 3.6 0.072 12.7 3.6 1.2 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF1604 PF07713.13 NODE_53199_length_333_cov_37.926174_g45274_i0reverse_frame_1 - 0.63 9.9 9.2 1.8 8.5 9.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1604) TAF8_C PF10406.9 NODE_53198_length_333_cov_39.550336_g45273_i0reverse_frame_1 - 0.045 14.3 0.7 0.073 13.6 0.7 1.3 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term SRP-alpha_N PF04086.13 NODE_53195_length_333_cov_54.325503_g45270_i0reverse_frame_1 - 6.5 6.6 13.3 7.3 6.4 13.3 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Nodulin_late PF07127.11 NODE_53188_length_333_cov_65.557047_g45263_i0reverse_frame_1 - 0.058 13.7 0.2 0.094 13.1 0.2 1.3 1 0 0 1 1 1 0 Late nodulin protein S_layer_N PF05123.12 NODE_53186_length_333_cov_66.926174_g45261_i0reverse_frame_1 - 0.0033 17.3 0.1 0.0039 17.1 0.1 1.0 1 0 0 1 1 1 1 S-layer like family, N-terminal region TMEM37 PF15108.6 NODE_53181_length_333_cov_69.124161_g45256_i0reverse_frame_1 - 0.0076 16.1 5.1 0.01 15.8 4.8 1.4 1 1 0 1 1 1 1 Voltage-dependent calcium channel gamma-like subunit protein family LCIB_C_CA PF18599.1 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.011 15.0 2.7 0.014 14.7 2.7 1.0 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases HemX PF04375.14 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.021 14.1 10.4 0.023 14.0 10.4 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Caps_synth_GfcC PF06251.11 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.026 14.2 3.6 0.03 14.0 3.6 1.1 1 0 0 1 1 1 0 Capsule biosynthesis GfcC FlaC_arch PF05377.11 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.078 13.4 7.7 0.41 11.1 1.9 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Sld5 PF05916.11 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.092 13.2 3.3 0.11 13.0 3.3 1.1 1 0 0 1 1 1 0 GINS complex protein YabA PF06156.13 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.11 13.2 12.4 0.038 14.6 9.6 1.5 1 1 0 1 1 1 0 Initiation control protein YabA Prefoldin PF02996.17 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 2.4 8.1 15.0 0.095 12.6 1.9 2.9 1 1 1 3 3 3 0 Prefoldin subunit DUF4407 PF14362.6 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 5.2 6.3 8.7 6.6 6.0 8.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Exonuc_VII_L PF02601.15 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 7.9 5.9 12.3 9.6 5.7 12.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit GRIP PF01465.20 NODE_53159_length_333_cov_94.305369_g45234_i0forward_frame_1 - 0.0039 17.1 0.0 0.0064 16.4 0.0 1.4 1 0 0 1 1 1 1 GRIP domain Vitelline_membr PF10542.9 NODE_53146_length_333_cov_164.023490_g45221_i0forward_frame_1 - 0.019 14.8 2.0 0.019 14.8 2.0 2.2 3 0 0 3 3 3 0 Vitelline membrane cysteine-rich region GreA_GreB_N PF03449.15 NODE_53137_length_333_cov_274.671141_g45212_i0forward_frame_1 - 0.043 14.0 1.8 0.15 12.2 0.5 2.3 1 1 1 2 2 2 0 Transcription elongation factor, N-terminal AvrM-A PF18241.1 NODE_53137_length_333_cov_274.671141_g45212_i0forward_frame_1 - 0.18 12.2 3.1 0.86 10.0 0.6 2.0 1 1 1 2 2 2 0 Flax-rust effector AvrM-A CnrY PF17524.2 NODE_53135_length_333_cov_292.637584_g45210_i0forward_frame_1 - 0.092 13.0 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Anti-sigma factor CnrY DUF2890 PF11081.8 NODE_53134_length_333_cov_293.305369_g45209_i0reverse_frame_1 - 0.18 11.9 0.1 0.22 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) Ribosomal_S14 PF00253.21 NODE_53129_length_333_cov_4007.218121_g45204_i0forward_frame_1 - 2.8e-11 43.0 2.6 4.3e-11 42.4 1.4 1.8 1 1 1 2 2 2 1 Ribosomal protein S14p/S29e Sulfotransfer_1 PF00685.27 NODE_53123_length_334_cov_1.324415_g45198_i0reverse_frame_2 - 0.00027 20.5 0.1 0.0003 20.3 0.1 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 NODE_53123_length_334_cov_1.324415_g45198_i0reverse_frame_2 - 0.016 15.6 0.0 0.029 14.8 0.0 1.3 1 0 0 1 1 1 0 Sulfotransferase family TRM13 PF05206.14 NODE_53123_length_334_cov_1.324415_g45198_i0forward_frame_3 - 0.12 11.9 1.0 0.14 11.6 1.0 1.1 1 0 0 1 1 1 0 Methyltransferase TRM13 MFS_1 PF07690.16 NODE_53122_length_334_cov_1.337793_g45197_i0reverse_frame_3 - 0.0013 17.7 2.1 0.012 14.5 0.1 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF4131 PF13567.6 NODE_53122_length_334_cov_1.337793_g45197_i0reverse_frame_3 - 0.016 14.8 0.5 0.024 14.3 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DUF4500 PF14937.6 NODE_53122_length_334_cov_1.337793_g45197_i0reverse_frame_3 - 0.14 12.2 0.0 0.43 10.6 0.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4500) Kelch_4 PF13418.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 3.2e-05 23.9 0.0 4.5e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 3.5e-05 23.9 0.0 5.4e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 0.002 18.4 0.0 0.0028 17.9 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 0.0025 17.8 0.8 0.0051 16.8 0.8 1.4 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 0.13 11.8 0.2 0.19 11.4 0.2 1.2 1 0 0 1 1 1 0 Kelch motif Kelch_2 PF07646.15 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 0.15 12.1 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_3 PF13415.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 1e-07 32.1 0.1 6.3e-07 29.5 0.0 2.0 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 1.2e-06 28.4 0.0 1.6e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 2.1e-05 24.4 0.0 3.3e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_2 PF07646.15 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 0.00023 21.0 0.0 0.00033 20.5 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 0.00055 20.1 0.0 0.0008 19.6 0.0 1.3 1 0 0 1 1 1 1 Kelch motif PTEN_C2 PF10409.9 NODE_53115_length_334_cov_1.535117_g45190_i0forward_frame_3 - 0.049 13.4 0.0 0.15 11.8 0.0 1.7 1 1 1 2 2 2 0 C2 domain of PTEN tumour-suppressor protein TetR_C_24 PF17932.1 NODE_53112_length_334_cov_1.695652_g45187_i0forward_frame_2 - 0.11 12.7 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Trp_leader2 PF08056.11 NODE_53112_length_334_cov_1.695652_g45187_i0forward_frame_2 - 0.15 12.1 5.7 0.34 10.9 5.7 1.5 1 0 0 1 1 1 0 Tryptophan operon leader peptide OppC_N PF12911.7 NODE_53111_length_334_cov_1.772575_g45186_i0reverse_frame_3 - 0.23 11.5 3.7 0.33 10.9 3.7 1.2 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C DUF2207 PF09972.9 NODE_53111_length_334_cov_1.772575_g45186_i0forward_frame_3 - 0.23 10.2 2.1 0.24 10.1 2.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DNA_pol_phi PF04931.13 NODE_53110_length_334_cov_1.779264_g45185_i0reverse_frame_2 - 0.15 10.1 0.0 0.18 9.9 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase phi NIDO PF06119.14 NODE_53105_length_334_cov_2.013378_g45180_i0forward_frame_2 - 0.055 14.4 0.1 0.082 13.9 0.1 1.4 1 0 0 1 1 1 0 Nidogen-like DUF1823 PF08853.11 NODE_53103_length_334_cov_2.147157_g45178_i0reverse_frame_3 - 0.036 14.3 0.0 0.043 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1823) NiFeSe_Hases PF00374.19 NODE_53103_length_334_cov_2.147157_g45178_i0reverse_frame_3 - 0.041 12.8 0.0 0.043 12.7 0.0 1.0 1 0 0 1 1 1 0 Nickel-dependent hydrogenase Sec20 PF03908.13 NODE_53101_length_334_cov_2.214047_g45176_i0reverse_frame_2 - 0.072 13.0 0.5 0.16 11.9 0.5 1.7 1 1 0 1 1 1 0 Sec20 zf-CCCH_4 PF18044.1 NODE_53097_length_334_cov_2.264214_g45172_i0reverse_frame_2 - 2.1 8.2 6.1 0.46 10.4 1.0 2.4 2 1 0 2 2 2 0 CCCH-type zinc finger DUF5546 PF17700.1 NODE_53095_length_334_cov_2.337793_g45170_i0reverse_frame_3 - 0.029 14.7 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5546) HHV6-IE PF03753.13 NODE_53093_length_334_cov_2.431438_g45168_i0forward_frame_3 - 1.1 6.6 3.8 1.4 6.3 3.8 1.0 1 0 0 1 1 1 0 Human herpesvirus 6 immediate early protein Spc7 PF08317.11 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.00043 19.3 4.1 0.00044 19.2 4.1 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein Lebercilin PF15619.6 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.0019 17.9 4.4 0.0023 17.6 4.4 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF659 PF04937.15 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.0047 16.8 1.7 0.0057 16.5 1.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF 659) FadA PF09403.10 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.0054 17.2 8.7 0.0092 16.4 8.7 1.4 1 0 0 1 1 1 1 Adhesion protein FadA BST2 PF16716.5 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.013 16.0 3.3 0.025 15.2 3.3 1.5 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 DUF4364 PF14277.6 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.017 14.9 3.5 0.024 14.4 3.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) Angiomotin_C PF12240.8 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.024 14.2 5.1 0.029 13.9 5.0 1.3 1 1 0 1 1 1 0 Angiomotin C terminal DUF3050 PF11251.8 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.033 13.8 1.1 0.035 13.7 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3050) Nup54_57_C PF18570.1 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.046 13.3 6.3 0.23 11.1 3.3 2.9 2 1 0 2 2 2 0 NUP57/Nup54 C-terminal domain Med9 PF07544.13 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.049 13.7 6.2 0.077 13.1 5.3 1.9 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 ATG16 PF08614.11 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.061 13.5 8.3 0.061 13.5 7.5 1.4 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF3810 PF12725.7 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.081 12.3 1.1 0.082 12.2 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) XhlA PF10779.9 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.092 13.0 4.4 0.19 11.9 4.4 1.6 1 0 0 1 1 1 0 Haemolysin XhlA Atg14 PF10186.9 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.12 11.4 4.8 0.13 11.3 4.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4407 PF14362.6 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.23 10.8 1.8 0.25 10.7 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1192 PF06698.11 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.34 11.0 8.5 3.9 7.6 0.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) TMPIT PF07851.13 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.41 9.8 3.6 0.41 9.8 3.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein TMF_DNA_bd PF12329.8 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.58 10.2 14.1 0.2 11.7 8.3 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding ALMT PF11744.8 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.6 8.9 5.0 0.64 8.8 5.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF724 PF05266.14 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 0.8 9.5 8.7 0.84 9.4 8.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DivIC PF04977.15 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 1.1 9.1 8.8 7 6.5 8.8 2.1 1 1 0 1 1 1 0 Septum formation initiator Fib_alpha PF08702.10 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 1.1 9.4 7.7 1.4 9.1 7.3 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family APG6_N PF17675.1 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 1.6 9.3 11.0 1.7 9.2 10.6 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region MatP_C PF17414.2 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 4.2 7.6 6.6 16 5.8 0.2 2.9 3 1 1 4 4 3 0 MatP C-terminal ribbon-helix-helix domain Adhesin_P1_N PF18652.1 NODE_53092_length_334_cov_2.488294_g45167_i0forward_frame_3 - 6.2 6.9 9.7 5 7.2 4.3 2.4 1 1 1 2 2 2 0 Adhesin P1 N-terminal domain Dishevelled PF02377.15 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_3 - 0.48 10.9 13.4 0.55 10.7 13.4 1.1 1 0 0 1 1 1 0 Dishevelled specific domain Endostatin PF06482.11 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_3 - 1.1 8.6 10.4 1.2 8.5 10.4 1.0 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin Zip PF02535.22 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_3 - 3.1 6.9 19.4 3.4 6.8 19.4 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter CAP_N PF01213.19 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_2 - 0.12 11.8 3.5 0.13 11.7 3.5 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF737 PF05300.11 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_2 - 4.1 7.7 6.2 4.5 7.6 6.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Apt1 PF10351.9 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_2 - 6.8 5.4 13.4 6.4 5.5 13.4 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Lin-8 PF03353.15 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_2 - 8.3 5.9 6.5 10 5.6 6.5 1.3 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Sporozoite_P67 PF05642.11 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_2 - 10 4.1 15.9 9.7 4.1 15.9 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen SPX PF03105.19 NODE_53090_length_334_cov_2.622074_g45165_i0reverse_frame_2 - 10 5.9 19.9 11 5.8 19.9 1.1 1 0 0 1 1 1 0 SPX domain DUF2207 PF09972.9 NODE_53090_length_334_cov_2.622074_g45165_i0forward_frame_3 - 0.88 8.3 2.3 0.97 8.1 2.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TcpE PF12648.7 NODE_53090_length_334_cov_2.622074_g45165_i0forward_frame_3 - 0.89 10.1 12.2 1.5 9.4 12.2 1.3 1 0 0 1 1 1 0 TcpE family DUF2244 PF10003.9 NODE_53090_length_334_cov_2.622074_g45165_i0forward_frame_3 - 1.4 8.6 9.1 2.1 8.0 9.1 1.3 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) LSR PF05624.14 NODE_53090_length_334_cov_2.622074_g45165_i0forward_frame_3 - 3.6 7.7 8.2 11 6.2 8.2 1.8 1 1 0 1 1 1 0 Lipolysis stimulated receptor (LSR) DUF3043 PF11241.8 NODE_53090_length_334_cov_2.622074_g45165_i0forward_frame_3 - 4.3 7.3 15.8 5 7.1 15.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) GPI2 PF06432.11 NODE_53090_length_334_cov_2.622074_g45165_i0forward_frame_3 - 5.3 6.4 13.7 6.8 6.0 13.7 1.2 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase Afi1 PF07792.12 NODE_53090_length_334_cov_2.622074_g45165_i0forward_frame_2 - 1.3 9.5 8.1 1.6 9.2 8.1 1.1 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking EamA PF00892.20 NODE_53087_length_334_cov_2.712375_g45162_i0forward_frame_3 - 1.2e-07 31.9 13.4 3.4e-06 27.3 2.7 2.1 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.6 NODE_53087_length_334_cov_2.712375_g45162_i0forward_frame_3 - 0.0027 17.3 2.6 0.0029 17.2 2.6 1.2 1 0 0 1 1 1 1 Putative multidrug resistance efflux transporter DUF2516 PF10724.9 NODE_53084_length_334_cov_2.819398_g45159_i0reverse_frame_2 - 0.068 13.5 1.0 0.086 13.1 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2516) DUF4771 PF15995.5 NODE_53084_length_334_cov_2.819398_g45159_i0forward_frame_2 - 0.0072 16.6 0.1 0.023 15.0 0.0 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4771) MukF_C PF17193.4 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.027 14.6 1.1 0.033 14.3 1.1 1.2 1 0 0 1 1 1 0 MukF C-terminal domain FAM76 PF16046.5 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.051 12.9 6.5 0.096 12.0 6.5 1.4 1 1 0 1 1 1 0 FAM76 protein TcdB_N PF12918.7 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.09 13.1 0.1 0.09 13.1 0.1 2.4 2 1 0 2 2 2 0 TcdB toxin N-terminal helical domain ABC_tran_Xtn PF12848.7 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.13 12.3 0.3 0.13 12.3 0.3 1.9 2 0 0 2 2 2 0 ABC transporter Col_cuticle_N PF01484.17 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.15 12.2 0.3 0.15 12.2 0.3 2.1 3 0 0 3 3 3 0 Nematode cuticle collagen N-terminal domain Shugoshin_N PF07558.11 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.19 11.6 17.6 3.4 7.6 1.8 3.5 2 1 1 3 3 3 0 Shugoshin N-terminal coiled-coil region TSC22 PF01166.18 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.55 10.6 13.5 0.38 11.1 2.1 3.2 2 2 1 3 3 3 0 TSC-22/dip/bun family bZIP_2 PF07716.15 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.71 10.0 13.3 0.11 12.6 2.8 2.7 3 1 0 3 3 3 0 Basic region leucine zipper V-SNARE PF05008.15 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.81 10.1 7.9 0.32 11.4 1.8 2.7 2 1 1 3 3 3 0 Vesicle transport v-SNARE protein N-terminus Fungal_TACC PF12709.7 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 5.2 7.6 11.0 0.55 10.7 2.6 2.4 2 1 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins ZapB PF06005.12 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 6.3 7.3 16.3 5.4 7.5 2.2 2.8 2 2 0 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 7.1 6.5 8.7 23 4.9 3.6 2.4 2 1 0 2 2 2 0 Septum formation initiator bZIP_1 PF00170.21 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 9.9 6.3 15.4 4.6 7.4 5.1 3.0 2 2 0 2 2 2 0 bZIP transcription factor DUF5584 PF17822.1 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_2 - 0.067 12.6 3.9 0.076 12.5 3.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5584) DUF3341 PF11821.8 NODE_53075_length_334_cov_4.214047_g45150_i0reverse_frame_3 - 0.081 12.6 0.2 0.14 11.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) Rrp44_S1 PF17215.3 NODE_53073_length_334_cov_22.923077_g45148_i0reverse_frame_2 - 0.16 11.9 2.2 0.24 11.4 2.2 1.3 1 0 0 1 1 1 0 S1 domain Mitoc_L55 PF09776.9 NODE_53073_length_334_cov_22.923077_g45148_i0reverse_frame_2 - 0.41 10.4 5.3 3.4 7.4 0.0 2.1 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L55 Herpes_LMP1 PF05297.11 NODE_53071_length_334_cov_47.224080_g45146_i0forward_frame_2 - 0.91 8.7 2.8 0.88 8.7 2.8 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Cas_CXXC_CXXC PF09706.10 NODE_53061_length_334_cov_79.110368_g45136_i0reverse_frame_2 - 0.8 10.0 4.3 1.4 9.2 4.3 1.4 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) DUF515 PF04415.12 NODE_53045_length_334_cov_139.040134_g45120_i0reverse_frame_3 - 7.7 4.8 6.1 4 5.7 4.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF515) Prolamin_like PF05617.11 NODE_53043_length_334_cov_156.438127_g45118_i0reverse_frame_2 - 0.016 15.4 0.4 0.022 14.9 0.3 1.4 1 1 0 1 1 1 0 Prolamin-like zf-LITAF-like PF10601.9 NODE_53041_length_334_cov_185.732441_g45116_i0forward_frame_3 - 1.4 9.3 8.6 0.12 12.7 3.0 2.0 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Glu_dehyd_C PF16912.5 NODE_53040_length_334_cov_195.270903_g45115_i0reverse_frame_3 - 0.07 12.6 0.1 0.09 12.2 0.1 1.1 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus FlpD PF02662.16 NODE_53039_length_334_cov_276.013378_g45114_i0forward_frame_2 - 0.032 14.2 0.1 0.051 13.6 0.1 1.3 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit DUF268 PF03269.14 NODE_53039_length_334_cov_276.013378_g45114_i0forward_frame_2 - 0.061 13.2 0.7 0.098 12.5 0.3 1.5 1 1 1 2 2 2 0 Caenorhabditis protein of unknown function, DUF268 PUF PF00806.19 NODE_53039_length_334_cov_276.013378_g45114_i0forward_frame_2 - 0.09 12.5 0.0 0.22 11.3 0.0 1.7 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat STAT_alpha PF01017.20 NODE_53039_length_334_cov_276.013378_g45114_i0forward_frame_2 - 2.3 8.1 10.8 2.4 8.0 7.3 2.0 1 1 1 2 2 2 0 STAT protein, all-alpha domain KASH PF10541.9 NODE_53029_length_335_cov_1.023333_g45104_i0reverse_frame_3 - 0.0052 17.0 0.1 0.0052 17.0 0.1 2.1 1 1 1 2 2 2 1 Nuclear envelope localisation domain TMEM238 PF15125.6 NODE_53027_length_335_cov_1.180000_g45102_i0forward_frame_2 - 0.039 14.2 2.5 1.1 9.6 0.0 2.3 2 0 0 2 2 2 0 TMEM238 protein family TRP PF06011.12 NODE_53025_length_335_cov_1.293333_g45100_i0forward_frame_3 - 0.00063 18.6 3.8 0.00074 18.3 3.8 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel zf-C6H2 PF15801.5 NODE_53025_length_335_cov_1.293333_g45100_i0forward_frame_2 - 3.4 8.0 12.4 0.25 11.7 6.6 2.2 2 1 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding Phospholamban PF04272.14 NODE_53017_length_335_cov_1.806667_g45092_i0reverse_frame_3 - 0.16 11.5 0.3 0.16 11.5 0.3 2.2 2 0 0 2 2 2 0 Phospholamban EamA PF00892.20 NODE_53016_length_335_cov_1.816667_g45091_i0reverse_frame_3 - 0.0068 16.6 0.1 0.0072 16.5 0.1 1.1 1 0 0 1 1 1 1 EamA-like transporter family TRP PF06011.12 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_3 - 0.012 14.4 10.6 0.014 14.2 10.6 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel PspB PF06667.12 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_3 - 0.21 11.6 0.2 0.21 11.6 0.2 2.3 2 0 0 2 2 2 0 Phage shock protein B DUF3270 PF11674.8 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_3 - 0.26 11.5 5.8 0.12 12.6 2.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3270) PGAP1 PF07819.13 NODE_53013_length_335_cov_1.896667_g45088_i0forward_frame_2 - 0.06 13.1 0.1 0.064 13.0 0.1 1.1 1 0 0 1 1 1 0 PGAP1-like protein DUF2768 PF10966.8 NODE_53005_length_335_cov_2.416667_g45080_i0reverse_frame_2 - 7.3 7.1 9.9 0.3 11.6 4.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2768) Ter PF05472.11 NODE_53001_length_335_cov_2.850000_g45076_i0forward_frame_2 - 2e-47 161.7 0.6 2.1e-47 161.6 0.6 1.0 1 0 0 1 1 1 1 DNA replication terminus site-binding protein (Ter protein) Sun2_CC2 PF18580.1 NODE_52998_length_335_cov_2.966667_g45073_i0forward_frame_2 - 0.11 12.8 0.1 0.24 11.7 0.0 1.7 2 0 0 2 2 2 0 SUN2 coiled coil domain 2 TAFII55_N PF04658.13 NODE_52997_length_335_cov_3.233333_g45072_i0forward_frame_3 - 6.9e-17 61.6 0.2 8.8e-17 61.3 0.2 1.1 1 0 0 1 1 1 1 TAFII55 protein conserved region NEMO PF11577.8 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_2 - 0.0022 18.0 0.3 0.003 17.5 0.3 1.3 1 0 0 1 1 1 1 NF-kappa-B essential modulator NEMO CCAP PF11105.8 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_2 - 0.011 15.7 0.5 0.017 15.1 0.3 1.5 1 1 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a PVL_ORF50 PF07768.11 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_2 - 0.036 14.4 2.4 0.046 14.0 2.4 1.1 1 0 0 1 1 1 0 PVL ORF-50-like family CpxA_peri PF16527.5 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_2 - 0.055 13.9 0.7 0.066 13.6 0.7 1.1 1 0 0 1 1 1 0 Two-component sensor protein CpxA, periplasmic domain NEMO PF11577.8 NODE_52994_length_335_cov_3.653333_g45069_i0reverse_frame_2 - 0.0015 18.5 0.6 0.0021 18.0 0.6 1.3 1 0 0 1 1 1 1 NF-kappa-B essential modulator NEMO CCAP PF11105.8 NODE_52994_length_335_cov_3.653333_g45069_i0reverse_frame_2 - 0.012 15.5 0.7 0.019 14.9 0.4 1.5 1 1 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a PVL_ORF50 PF07768.11 NODE_52994_length_335_cov_3.653333_g45069_i0reverse_frame_2 - 0.072 13.4 3.1 0.094 13.0 3.1 1.1 1 0 0 1 1 1 0 PVL ORF-50-like family FumaraseC_C PF10415.9 NODE_52993_length_335_cov_3.753333_g45068_i0reverse_frame_2 - 4.1e-23 81.6 0.1 5.1e-23 81.2 0.1 1.1 1 0 0 1 1 1 1 Fumarase C C-terminus Ter PF05472.11 NODE_52993_length_335_cov_3.753333_g45068_i0forward_frame_3 - 2e-14 53.4 0.1 2.4e-14 53.1 0.1 1.1 1 0 0 1 1 1 1 DNA replication terminus site-binding protein (Ter protein) Nop16 PF09420.10 NODE_52991_length_335_cov_3.806667_g45066_i0forward_frame_2 - 0.089 12.8 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 IL6 PF00489.17 NODE_52990_length_335_cov_3.986667_g45065_i0reverse_frame_3 - 0.1 12.1 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 Interleukin-6/G-CSF/MGF family Glyco_hydro_67M PF07488.12 NODE_52990_length_335_cov_3.986667_g45065_i0forward_frame_2 - 0.072 12.2 0.0 0.084 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 middle domain PsbH PF00737.20 NODE_52990_length_335_cov_3.986667_g45065_i0forward_frame_2 - 0.092 12.5 2.7 0.15 11.8 2.7 1.3 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein DUF4044 PF13253.6 NODE_52990_length_335_cov_3.986667_g45065_i0forward_frame_2 - 4.6 6.9 6.2 1.7 8.2 3.7 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4044) DUF1508 PF07411.12 NODE_52989_length_335_cov_4.106667_g45064_i0forward_frame_2 - 0.015 15.1 1.0 0.023 14.6 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1508) ApbE PF02424.15 NODE_52989_length_335_cov_4.106667_g45064_i0forward_frame_2 - 0.044 13.3 0.1 0.049 13.2 0.1 1.1 1 0 0 1 1 1 0 ApbE family Ketoacyl-synt_2 PF13723.6 NODE_52989_length_335_cov_4.106667_g45064_i0forward_frame_2 - 0.061 13.0 0.2 0.065 12.9 0.2 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain Bac_rhamnosid_N PF08531.10 NODE_52988_length_335_cov_5.490000_g45063_i0reverse_frame_2 - 0.0045 16.8 0.0 0.0053 16.6 0.0 1.1 1 0 0 1 1 1 1 Alpha-L-rhamnosidase N-terminal domain NPCC PF08058.11 NODE_52988_length_335_cov_5.490000_g45063_i0reverse_frame_2 - 2.5 8.2 8.2 1.1 9.3 3.3 1.9 1 1 1 2 2 2 0 Nuclear pore complex component CbiQ PF02361.16 NODE_52987_length_335_cov_8.136667_g45062_i0forward_frame_3 - 1.2 8.7 7.7 1.5 8.4 7.7 1.1 1 0 0 1 1 1 0 Cobalt transport protein Pentapeptide_4 PF13599.6 NODE_52986_length_335_cov_10.026667_g45061_i0reverse_frame_2 - 0.042 14.0 0.1 0.056 13.6 0.1 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) Spc7_C2 PF15577.6 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_3 - 0.044 13.9 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Spc7_C2 FlaC_arch PF05377.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 4.5e-06 27.0 12.8 0.0027 18.1 1.7 2.3 1 1 0 2 2 2 2 Flagella accessory protein C (FlaC) YkyA PF10368.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 7.4e-06 25.8 17.6 8.6e-06 25.5 17.6 1.0 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein YabA PF06156.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.00039 21.0 12.3 0.03 15.0 4.0 2.1 1 1 1 2 2 2 2 Initiation control protein YabA ZapB PF06005.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0005 20.4 16.1 0.018 15.5 5.2 2.3 1 1 1 2 2 2 2 Cell division protein ZapB CENP-F_leu_zip PF10473.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0013 18.7 14.3 0.0017 18.4 14.3 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PRKG1_interact PF15898.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0018 19.1 13.2 0.003 18.4 13.2 1.5 1 1 0 1 1 1 1 cGMP-dependent protein kinase interacting domain Lebercilin PF15619.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.002 17.8 13.9 0.0028 17.3 13.9 1.2 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease bZIP_1 PF00170.21 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0021 18.1 18.2 0.013 15.6 2.2 3.0 1 1 2 3 3 3 2 bZIP transcription factor TolA_bind_tri PF16331.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0025 17.9 4.2 0.29 11.2 0.6 2.1 1 1 1 2 2 2 1 TolA binding protein trimerisation ABC_tran_CTD PF16326.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0033 17.6 2.0 0.0033 17.6 2.0 2.3 1 1 2 3 3 3 1 ABC transporter C-terminal domain SHE3 PF17078.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0034 17.1 15.7 0.0041 16.9 15.7 1.1 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 bZIP_2 PF07716.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0035 17.4 10.7 0.019 15.0 2.1 2.7 2 1 0 2 2 2 1 Basic region leucine zipper TPR_MLP1_2 PF07926.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0045 17.0 15.0 0.0064 16.6 5.4 2.0 1 1 1 2 2 2 1 TPR/MLP1/MLP2-like protein SCO1-SenC PF02630.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0065 16.4 1.0 1.7 8.6 0.4 2.0 1 1 1 2 2 2 1 SCO1/SenC DUF4201 PF13870.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0071 16.1 14.5 0.017 14.8 14.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) GAS PF13851.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0084 15.5 4.9 0.0084 15.5 4.9 2.0 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding HAP1_N PF04849.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.01 15.1 4.4 0.01 15.1 4.4 2.0 1 1 1 2 2 2 0 HAP1 N-terminal conserved region Ax_dynein_light PF10211.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.014 15.4 6.1 0.014 15.4 6.1 2.0 1 1 1 2 2 2 0 Axonemal dynein light chain TRAF_BIRC3_bd PF16673.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.014 15.2 1.9 0.031 14.1 0.1 2.3 2 1 1 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain DUF4200 PF13863.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.016 15.6 16.8 0.064 13.7 0.9 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) KELK PF15796.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.022 15.2 11.5 0.1 13.1 1.7 2.2 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase TMF_TATA_bd PF12325.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.024 14.9 13.7 0.11 12.7 13.7 1.8 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DHR10 PF18595.1 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.032 14.3 14.8 0.29 11.2 14.7 2.0 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain DUF3584 PF12128.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.034 11.7 10.8 0.039 11.5 10.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ATG16 PF08614.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.034 14.4 12.8 0.047 13.9 12.8 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Occludin_ELL PF07303.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.038 14.7 2.7 0.038 14.7 2.7 2.0 1 1 1 2 2 2 0 Occludin homology domain Atg14 PF10186.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.038 13.1 11.5 0.06 12.4 11.5 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_MT_bd PF06657.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.04 14.4 6.6 0.11 13.0 1.0 2.5 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 TMPIT PF07851.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.04 13.2 10.1 0.044 13.0 10.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein Rootletin PF15035.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.042 13.9 10.5 0.051 13.6 10.5 1.1 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Sec34 PF04136.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.044 13.7 12.0 0.42 10.5 0.8 2.0 1 1 1 2 2 2 0 Sec34-like family UPF0242 PF06785.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.045 13.9 14.4 0.37 10.9 9.0 2.0 1 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Spc7 PF08317.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.05 12.5 14.6 0.07 12.0 14.6 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein KASH_CCD PF14662.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.05 13.4 15.2 0.4 10.5 4.5 2.0 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH NPV_P10 PF05531.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.061 13.8 13.4 0.14 12.6 2.0 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein CHASE3 PF05227.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.085 12.8 2.9 0.1 12.5 2.9 1.1 1 0 0 1 1 1 0 CHASE3 domain Jnk-SapK_ap_N PF09744.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.086 13.1 13.0 0.4 10.9 13.0 1.8 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 SesA PF17107.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.091 13.0 5.2 0.059 13.6 3.2 1.7 1 1 1 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases GreA_GreB_N PF03449.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.095 12.9 11.1 1.4 9.1 0.2 3.1 2 1 1 3 3 3 0 Transcription elongation factor, N-terminal DUF4047 PF13256.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.11 12.7 7.2 0.043 14.0 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4047) Fez1 PF06818.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.11 12.9 12.9 0.28 11.6 12.9 1.6 1 1 0 1 1 1 0 Fez1 Med30 PF11315.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.11 12.6 8.4 0.15 12.2 8.4 1.2 1 0 0 1 1 1 0 Mediator complex subunit 30 Golgin_A5 PF09787.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.12 11.8 9.5 0.14 11.6 9.5 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.14 11.5 11.3 0.19 11.0 11.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Dor1 PF04124.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.14 10.8 9.8 0.17 10.5 9.8 1.1 1 0 0 1 1 1 0 Dor1-like family Exonuc_VII_L PF02601.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.14 11.7 7.6 0.17 11.4 7.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Herpes_UL6 PF01763.16 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.16 10.5 7.6 0.22 10.0 7.6 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like ADIP PF11559.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.16 12.0 15.0 0.14 12.2 5.2 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF3552 PF12072.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.17 11.3 15.1 0.26 10.7 8.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) BLOC1_2 PF10046.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.18 12.1 15.5 0.043 14.1 5.9 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TSNAXIP1_N PF15739.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.19 12.2 12.3 0.29 11.5 6.5 2.1 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus SlyX PF04102.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.19 12.4 4.3 3.2 8.4 4.3 2.4 1 1 0 1 1 1 0 SlyX CENP-H PF05837.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.19 12.1 12.6 1.1 9.6 4.5 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Gaa1 PF04114.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.2 10.6 0.9 0.2 10.6 0.9 1.2 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component CAGE1 PF15066.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.21 10.2 17.6 0.26 9.9 17.6 1.0 1 0 0 1 1 1 0 Cancer-associated gene protein 1 family TSC22 PF01166.18 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.22 11.9 9.2 0.22 11.9 1.1 2.4 1 1 0 2 2 2 0 TSC-22/dip/bun family Herpes_UL14 PF03580.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.23 11.7 6.8 0.34 11.2 6.8 1.2 1 0 0 1 1 1 0 Herpesvirus UL14-like protein SOGA PF11365.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.24 12.5 10.4 0.44 11.7 0.5 2.4 1 1 0 2 2 2 0 Protein SOGA V-SNARE_C PF12352.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.25 11.6 4.0 1.2 9.5 0.0 2.6 3 0 0 3 3 2 0 Snare region anchored in the vesicle membrane C-terminus DUF5082 PF16888.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.28 11.5 14.7 0.33 11.3 4.9 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF2205 PF10224.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.31 11.1 12.5 4.4 7.4 8.5 2.9 1 1 1 2 2 2 0 Short coiled-coil protein DivIC PF04977.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.31 10.8 20.1 0.77 9.6 2.9 3.1 1 1 2 3 3 3 0 Septum formation initiator APG6_N PF17675.1 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.32 11.5 14.9 1.3 9.6 15.0 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region WXG100 PF06013.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.32 11.2 5.3 1.5 9.1 2.1 2.8 1 1 1 2 2 2 0 Proteins of 100 residues with WXG DUF812 PF05667.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.34 9.8 15.2 0.43 9.4 15.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF1664 PF07889.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.37 10.8 8.9 7.9 6.5 4.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Aconitase_C PF00694.19 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.37 11.1 4.3 0.18 12.1 1.8 1.6 1 1 1 2 2 2 0 Aconitase C-terminal domain bZIP_Maf PF03131.17 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.39 11.3 7.3 9 6.9 0.4 2.2 1 1 1 2 2 2 0 bZIP Maf transcription factor Seryl_tRNA_N PF02403.22 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.39 11.0 18.4 3.3 8.0 18.4 2.0 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain MHC2-interact PF09307.10 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.44 10.6 3.9 0.66 10.0 0.1 2.4 1 1 0 2 2 2 0 CLIP, MHC2 interacting DASH_Dam1 PF08653.10 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.52 10.1 8.9 2.1 8.2 0.2 2.9 1 1 2 3 3 3 0 DASH complex subunit Dam1 KxDL PF10241.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.52 10.6 10.4 0.5 10.7 5.0 2.7 1 1 2 3 3 3 0 Uncharacterized conserved protein DUF3450 PF11932.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.68 9.2 12.6 0.21 10.8 4.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) BST2 PF16716.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.7 10.5 15.0 6.6 7.4 0.6 2.5 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Laminin_II PF06009.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.78 9.8 13.3 26 4.8 13.3 2.2 1 1 0 1 1 1 0 Laminin Domain II Tweety PF04906.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.88 8.2 3.4 0.93 8.1 3.4 1.0 1 0 0 1 1 1 0 Tweety Swi5 PF07061.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.95 9.6 14.8 2.4 8.3 0.8 3.1 1 1 2 3 3 3 0 Swi5 Fib_alpha PF08702.10 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.97 9.6 10.4 1.9 8.7 10.4 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family H-kinase_dim PF02895.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1 9.8 5.9 0.5 10.8 0.7 2.4 1 1 2 3 3 3 0 Signal transducing histidine kinase, homodimeric domain DUF16 PF01519.16 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.2 9.7 13.3 0.23 11.9 4.1 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 EMP24_GP25L PF01105.24 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.2 9.1 11.3 7.1 6.5 0.4 2.1 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD GrpE PF01025.19 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.3 8.7 18.2 12 5.6 18.2 2.0 1 1 0 1 1 1 0 GrpE V_ATPase_I PF01496.19 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.3 6.8 8.5 1.6 6.5 8.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.5 9.0 12.3 5.5e+02 0.8 12.2 2.3 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 AAA_23 PF13476.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.4 8.6 16.4 2.9 8.3 16.4 1.1 1 0 0 1 1 1 0 AAA domain USP8_interact PF08941.10 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.5 7.9 5.9 14 5.4 1.1 2.0 1 1 1 2 2 2 0 USP8 interacting DUF948 PF06103.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.7 8.3 10.6 0.69 10.2 2.5 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) BPL_N PF09825.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.7 7.0 6.8 3 6.8 6.8 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF4140 PF13600.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.9 8.4 10.7 2.5e+02 2.2 10.7 2.6 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) TMF_DNA_bd PF12329.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 3.9 7.5 23.4 0.11 12.5 6.1 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Fzo_mitofusin PF04799.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 4.2 6.9 9.6 6.4 6.3 4.9 2.0 1 1 1 2 2 2 0 fzo-like conserved region DUF334 PF03904.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.2 6.3 11.5 8.2 5.9 11.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) PCRF PF03462.18 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.5 6.6 10.3 8.2 6.2 10.3 1.2 1 0 0 1 1 1 0 PCRF domain Spc24 PF08286.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.6 7.0 16.4 1.9 8.7 4.9 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF724 PF05266.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.6 6.5 12.8 10 5.9 12.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DUF2203 PF09969.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.8 7.4 7.9 94 3.8 8.0 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Tho2 PF11262.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 7.2 5.7 12.6 0.16 11.1 3.1 1.9 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 bZIP_2 PF07716.15 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 0.0046 17.0 3.5 0.0046 17.0 3.5 2.7 2 2 1 3 3 3 1 Basic region leucine zipper MIS13 PF08202.11 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 0.01 15.1 8.6 0.012 15.0 8.6 1.0 1 0 0 1 1 1 0 Mis12-Mtw1 protein family ZapB PF06005.12 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 0.031 14.7 8.7 0.055 13.9 8.7 1.4 1 0 0 1 1 1 0 Cell division protein ZapB SlyX PF04102.12 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 0.13 12.9 5.1 0.27 11.9 4.8 1.7 1 1 0 1 1 1 0 SlyX DivIC PF04977.15 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 1.6 8.5 11.5 0.23 11.2 4.7 2.3 2 1 0 2 2 2 0 Septum formation initiator Chitin_synth_1 PF01644.17 NODE_52973_length_335_cov_58.150000_g45048_i0reverse_frame_2 - 0.02 14.9 0.3 0.026 14.5 0.3 1.4 1 1 0 1 1 1 0 Chitin synthase Collagen PF01391.18 NODE_52969_length_335_cov_67.046667_g45044_i0forward_frame_2 - 2.9e-05 23.8 12.4 4.1e-05 23.3 12.4 1.2 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) Rep_4 PF05797.11 NODE_52966_length_335_cov_73.116667_g45041_i0forward_frame_3 - 0.075 12.2 0.3 0.086 12.0 0.3 1.1 1 0 0 1 1 1 0 Yeast trans-acting factor (REP1/REP2) PABP PF00658.18 NODE_52963_length_335_cov_79.523333_g45038_i0reverse_frame_2 - 2.5e-06 27.6 0.7 4.6e-06 26.7 0.7 1.4 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain DUF5542 PF17696.1 NODE_52961_length_335_cov_79.706667_g45036_i0forward_frame_3 - 0.069 13.3 0.0 0.069 13.3 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5542) zf-RING_7 PF02591.15 NODE_52959_length_335_cov_96.736667_g45034_i0forward_frame_3 - 0.18 12.0 0.1 0.3 11.3 0.1 1.3 1 0 0 1 1 1 0 C4-type zinc ribbon domain FlxA PF14282.6 NODE_52954_length_335_cov_108.356667_g45029_i0forward_frame_3 - 0.063 13.3 0.1 0.08 12.9 0.1 1.1 1 0 0 1 1 1 0 FlxA-like protein Antiterm PF03589.13 NODE_52951_length_335_cov_121.910000_g45026_i0reverse_frame_2 - 0.011 16.0 0.0 0.015 15.6 0.0 1.2 1 0 0 1 1 1 0 Antitermination protein DPM3 PF08285.11 NODE_52949_length_335_cov_124.033333_g45024_i0reverse_frame_3 - 3.3 8.0 9.3 9.1 6.6 9.3 1.8 1 1 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Ac76 PF05814.11 NODE_52949_length_335_cov_124.033333_g45024_i0forward_frame_3 - 2.6 8.1 8.1 2.4 8.2 0.9 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) PWWP PF00855.17 NODE_52949_length_335_cov_124.033333_g45024_i0forward_frame_2 - 7.1 7.1 9.0 0.32 11.4 1.1 2.0 1 1 0 2 2 2 0 PWWP domain ETRAMP PF09716.10 NODE_52949_length_335_cov_124.033333_g45024_i0forward_frame_2 - 7.7 6.6 12.8 0.98 9.5 2.9 2.1 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) zf-C3HC4_3 PF13920.6 NODE_52948_length_335_cov_135.253333_g45023_i0reverse_frame_3 - 9.7e-10 38.2 3.9 2e-09 37.2 3.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Gp58 PF07902.11 NODE_52948_length_335_cov_135.253333_g45023_i0reverse_frame_3 - 0.11 10.7 0.0 0.12 10.7 0.0 1.0 1 0 0 1 1 1 0 gp58-like protein GP41 PF00517.17 NODE_52948_length_335_cov_135.253333_g45023_i0forward_frame_3 - 0.17 11.8 0.2 0.19 11.6 0.2 1.1 1 0 0 1 1 1 0 Retroviral envelope protein DUF3405 PF11885.8 NODE_52942_length_335_cov_167.093333_g45017_i0forward_frame_2 - 0.013 14.1 0.5 0.016 13.8 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) DUF2478 PF10649.9 NODE_52939_length_335_cov_188.666667_g45014_i0forward_frame_2 - 0.043 13.4 0.3 0.062 12.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2478) CBM_5_12 PF02839.14 NODE_52937_length_335_cov_253.666667_g45012_i0reverse_frame_3 - 0.21 12.3 0.6 0.21 12.3 0.6 1.7 2 0 0 2 2 2 0 Carbohydrate binding domain MotB_plug PF13677.6 NODE_52935_length_335_cov_294.490000_g45010_i0reverse_frame_3 - 0.068 12.8 2.3 0.13 11.9 0.0 2.1 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB MORN PF02493.20 NODE_52929_length_335_cov_1156.513333_g45004_i0forward_frame_3 - 3.9e-18 64.2 18.6 2.6e-07 30.1 1.7 3.5 4 0 0 4 4 4 3 MORN repeat Ribosomal_S3_C PF00189.20 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_3 - 0.0024 18.3 1.9 3.7 8.1 0.1 3.0 1 1 2 3 3 3 3 Ribosomal protein S3, C-terminal domain PRD1_DD PF11087.8 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_2 - 0.23 11.1 2.4 30 4.4 0.3 4.0 4 1 1 5 5 5 0 PRD1 phage membrane DNA delivery DUF4880 PF16220.5 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_3 - 0.026 14.4 11.8 9.5 6.2 0.1 4.8 5 0 0 5 5 5 0 Domain of unknown function (DUF4880) HU-CCDC81_bac_1 PF18174.1 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_3 - 0.057 13.3 0.2 37 4.3 0.0 3.8 2 1 2 4 4 4 0 CCDC81-like prokaryotic HU domain 1 SapC PF07277.11 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_2 - 0.44 10.1 2.5 60 3.1 0.1 3.3 1 1 3 4 4 4 0 SapC DUF4312 PF14189.6 NODE_52927_length_335_cov_3214.530000_g45002_i0forward_frame_3 - 0.035 14.1 0.9 0.076 13.0 0.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) zf-met PF12874.7 NODE_52925_length_335_cov_18171.633333_g45000_i0forward_frame_2 - 0.25 11.8 2.1 9.9 6.7 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Pox_Rap94 PF03294.14 NODE_52924_length_335_cov_18171.703333_g44999_i0reverse_frame_2 - 0.015 13.4 0.5 0.018 13.2 0.5 1.0 1 0 0 1 1 1 0 RNA polymerase-associated transcription specificity factor, Rap94 zf-met PF12874.7 NODE_52924_length_335_cov_18171.703333_g44999_i0forward_frame_2 - 0.24 11.8 2.1 9.9 6.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C4_Topoisom PF01396.19 NODE_52921_length_336_cov_1.265781_g44996_i0forward_frame_3 - 0.00029 20.5 4.8 0.012 15.3 0.7 3.0 4 0 0 4 4 4 2 Topoisomerase DNA binding C4 zinc finger Ank_2 PF12796.7 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 4e-07 30.5 0.0 6.1e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 6.6e-06 26.3 0.1 0.0028 18.0 0.0 2.9 3 0 0 3 3 3 1 Ankyrin repeat Ank_3 PF13606.6 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 4.2e-05 23.6 0.0 0.03 14.8 0.0 2.6 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 0.00017 22.1 0.0 0.0028 18.2 0.0 2.3 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 0.013 15.8 0.0 0.037 14.3 0.0 1.9 1 1 0 1 1 1 0 Ankyrin repeats (many copies) BCLP PF12304.8 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_3 - 0.022 14.3 2.2 0.026 14.1 2.2 1.0 1 0 0 1 1 1 0 Beta-casein like protein bZIP_1 PF00170.21 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_2 - 0.012 15.7 1.2 0.012 15.7 1.2 2.1 1 1 1 2 2 2 0 bZIP transcription factor CEP63 PF17045.5 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_2 - 0.013 15.5 5.0 0.014 15.3 5.0 1.1 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa DUF4760 PF15956.5 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_2 - 0.056 13.6 3.7 0.089 12.9 3.7 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4760) SLAM PF06214.11 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_2 - 0.16 12.0 3.2 0.22 11.5 3.2 1.2 1 0 0 1 1 1 0 Signaling lymphocytic activation molecule (SLAM) protein COP23 PF14218.6 NODE_52917_length_336_cov_1.445183_g44992_i0forward_frame_3 - 0.031 14.0 0.5 0.043 13.6 0.5 1.3 1 1 0 1 1 1 0 Circadian oscillating protein COP23 DUF3145 PF11343.8 NODE_52915_length_336_cov_1.617940_g44990_i0reverse_frame_2 - 0.037 13.6 0.3 0.043 13.4 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3145) zf-C2H2_3rep PF18868.1 NODE_52909_length_336_cov_2.046512_g44984_i0reverse_frame_3 - 0.068 13.8 0.0 0.085 13.5 0.0 1.3 1 0 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats NDC10_II PF16787.5 NODE_52909_length_336_cov_2.046512_g44984_i0reverse_frame_3 - 0.19 10.7 0.1 0.23 10.5 0.1 1.1 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit, domain 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks211.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks211.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks211.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks211.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Mtc PF03820.17 NODE_52906_length_336_cov_2.285714_g44981_i0forward_frame_3 - 5.8e-30 104.4 0.4 6.1e-30 104.3 0.4 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier 2TM PF13239.6 NODE_52906_length_336_cov_2.285714_g44981_i0forward_frame_3 - 0.036 14.4 0.3 0.054 13.8 0.3 1.3 1 0 0 1 1 1 0 2TM domain SelK_SelG PF10961.8 NODE_52904_length_336_cov_2.398671_g44979_i0forward_frame_2 - 2.1 9.0 3.7 0.88 10.2 1.2 1.7 2 0 0 2 2 2 0 Selenoprotein SelK_SelG Rep_1B PF17873.1 NODE_52903_length_336_cov_2.431894_g44978_i0forward_frame_2 - 0.039 13.8 0.1 0.07 13.0 0.1 1.4 1 0 0 1 1 1 0 Replicase polyprotein 1ab FeS PF04060.13 NODE_52895_length_336_cov_2.641196_g44970_i0forward_frame_3 - 4.8e-13 48.5 6.3 8e-13 47.8 6.3 1.4 1 0 0 1 1 1 1 Putative Fe-S cluster UPF0054 PF02130.17 NODE_52893_length_336_cov_2.883721_g44968_i0forward_frame_3 - 0.017 15.0 0.2 0.022 14.6 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein family UPF0054 Cwf_Cwc_15 PF04889.12 NODE_52893_length_336_cov_2.883721_g44968_i0forward_frame_2 - 1.1 8.9 17.7 1.4 8.6 17.7 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein WRNPLPNID PF15017.6 NODE_52893_length_336_cov_2.883721_g44968_i0forward_frame_2 - 4.9 8.1 20.9 2 9.4 5.7 2.2 2 0 0 2 2 2 0 Putative WW-binding domain and destruction box Presenilin PF01080.17 NODE_52893_length_336_cov_2.883721_g44968_i0forward_frame_2 - 5.4 5.7 5.9 5.8 5.6 5.9 1.0 1 0 0 1 1 1 0 Presenilin LEP503 PF15221.6 NODE_52889_length_336_cov_3.408638_g44964_i0forward_frame_3 - 0.29 11.5 2.1 1.4 9.3 1.1 2.1 2 0 0 2 2 2 0 Lens epithelial cell protein LEP503 TrwB_AAD_bind PF10412.9 NODE_52884_length_336_cov_36.308970_g44959_i0reverse_frame_3 - 0.057 12.3 0.1 0.061 12.2 0.1 1.0 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DUF2752 PF10825.8 NODE_52882_length_336_cov_56.252492_g44957_i0reverse_frame_3 - 0.026 14.6 0.9 0.041 13.9 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2752) ZF-HD_dimer PF04770.12 NODE_52882_length_336_cov_56.252492_g44957_i0reverse_frame_3 - 0.042 14.2 1.4 0.064 13.6 1.4 1.3 1 0 0 1 1 1 0 ZF-HD protein dimerisation region SBE2 PF17076.5 NODE_52874_length_336_cov_67.611296_g44949_i0reverse_frame_3 - 0.077 11.2 1.1 0.084 11.1 1.1 1.0 1 0 0 1 1 1 0 SBE2, cell-wall formation PBECR5 PF18814.1 NODE_52874_length_336_cov_67.611296_g44949_i0forward_frame_3 - 0.029 14.3 0.5 0.031 14.2 0.5 1.1 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5 Glyco_hydro_38N PF01074.22 NODE_52872_length_336_cov_68.764120_g44947_i0reverse_frame_3 - 2.4e-13 50.1 0.2 2.5e-13 50.1 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Glyco_hydro_38N PF01074.22 NODE_52872_length_336_cov_68.764120_g44947_i0reverse_frame_2 - 1.5e-11 44.2 0.1 1.8e-11 43.9 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Glyco_hydro_61 PF03443.14 NODE_52867_length_336_cov_73.172757_g44942_i0forward_frame_3 - 0.016 15.2 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 61 DD_K PF12121.8 NODE_52865_length_336_cov_74.558140_g44940_i0reverse_frame_2 - 0.24 11.5 0.6 0.48 10.6 0.6 1.4 1 0 0 1 1 1 0 Dermaseptin p450 PF00067.22 NODE_52865_length_336_cov_74.558140_g44940_i0forward_frame_2 - 1e-12 47.6 0.0 1.2e-12 47.3 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DFF40 PF09230.10 NODE_52864_length_336_cov_78.770764_g44939_i0forward_frame_3 - 0.068 12.8 1.2 0.079 12.6 1.2 1.0 1 0 0 1 1 1 0 DNA fragmentation factor 40 kDa Aa_trans PF01490.18 NODE_52862_length_336_cov_83.767442_g44937_i0forward_frame_3 - 1.4e-05 24.0 3.0 1.6e-05 23.8 3.0 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein EF-hand_1 PF00036.32 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 4.9e-12 44.5 0.3 8.2e-06 25.0 0.6 2.3 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 1.2e-10 40.4 0.9 9.4e-06 24.9 0.7 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 4.5e-09 35.5 0.7 6.4e-05 22.6 0.6 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 4.8e-09 36.6 1.7 8.1e-09 35.8 1.7 1.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 5.7e-06 26.1 0.3 3.6e-05 23.5 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 0.023 15.0 0.1 0.033 14.5 0.1 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region VbhA PF18495.1 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 0.48 10.3 2.0 30 4.6 0.0 3.4 2 1 2 4 4 4 0 Antitoxin VbhA Rhabdo_glycop PF00974.18 NODE_52856_length_336_cov_96.966777_g44931_i0reverse_frame_2 - 0.049 12.1 0.2 0.062 11.8 0.2 1.1 1 0 0 1 1 1 0 Rhabdovirus spike glycoprotein SUI1 PF01253.22 NODE_52851_length_336_cov_120.119601_g44926_i0reverse_frame_3 - 1.4e-14 54.3 0.0 2.7e-14 53.4 0.0 1.4 1 0 0 1 1 1 1 Translation initiation factor SUI1 Bromo_MP PF01573.16 NODE_52849_length_336_cov_125.837209_g44924_i0forward_frame_2 - 0.026 13.9 0.0 0.03 13.7 0.0 1.3 1 0 0 1 1 1 0 Bromovirus movement protein PDE8 PF08629.10 NODE_52844_length_336_cov_197.305648_g44919_i0reverse_frame_3 - 0.28 11.2 3.8 2.7 8.0 0.5 2.3 2 0 0 2 2 2 0 PDE8 phosphodiesterase DUF4431 PF14485.6 NODE_52844_length_336_cov_197.305648_g44919_i0reverse_frame_2 - 0.065 13.0 0.1 14 5.6 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) DUF3667 PF12412.8 NODE_52844_length_336_cov_197.305648_g44919_i0reverse_frame_2 - 0.16 11.5 0.0 20 4.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3667) DUF2065 PF09838.9 NODE_52844_length_336_cov_197.305648_g44919_i0reverse_frame_2 - 0.31 11.1 3.4 11 6.2 0.2 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) DUF4129 PF13559.6 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_3 - 0.0054 17.0 0.0 3.2 8.1 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4129) MHC_I_3 PF16497.5 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_3 - 0.031 13.8 0.1 0.94 8.9 0.0 2.1 1 1 1 2 2 2 0 MHC-I family domain bPH_6 PF10756.9 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_2 - 0.00076 19.5 1.9 0.51 10.5 0.2 2.7 2 1 0 2 2 2 2 Bacterial PH domain Phage_holin_2_2 PF10746.9 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_2 - 0.045 13.4 0.0 11 5.8 0.0 2.2 2 0 0 2 2 2 0 Phage holin T7 family, holin superfamily II DUF5558 PF17713.1 NODE_52841_length_336_cov_417.807309_g44916_i0reverse_frame_2 - 0.015 15.7 1.1 0.14 12.6 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5558) FSAP_sig_propep PF03032.15 NODE_52841_length_336_cov_417.807309_g44916_i0forward_frame_3 - 1.3 9.1 0.1 1.3 9.1 0.1 2.5 3 0 0 3 3 3 0 Frog skin active peptide family signal and propeptide DUF4492 PF14899.6 NODE_52840_length_336_cov_466.352159_g44915_i0reverse_frame_3 - 0.011 15.7 0.5 0.018 14.9 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4492) DPM2 PF07297.12 NODE_52840_length_336_cov_466.352159_g44915_i0forward_frame_3 - 0.00063 20.0 3.7 0.0009 19.5 3.7 1.2 1 0 0 1 1 1 1 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Phage_holin_3_6 PF07332.11 NODE_52840_length_336_cov_466.352159_g44915_i0forward_frame_3 - 0.0048 16.9 1.0 0.0059 16.6 1.0 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III DUF1230 PF06799.11 NODE_52840_length_336_cov_466.352159_g44915_i0forward_frame_3 - 0.076 13.1 0.2 0.1 12.7 0.2 1.2 1 0 0 1 1 1 0 Conserved in the green lineage and diatoms 27 Glycophorin_A PF01102.18 NODE_52840_length_336_cov_466.352159_g44915_i0forward_frame_3 - 0.11 12.8 0.5 0.16 12.2 0.5 1.2 1 0 0 1 1 1 0 Glycophorin A DUF202 PF02656.15 NODE_52840_length_336_cov_466.352159_g44915_i0forward_frame_3 - 0.21 12.1 4.2 0.58 10.6 4.3 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF202) UPF0242 PF06785.11 NODE_52840_length_336_cov_466.352159_g44915_i0forward_frame_3 - 0.32 11.1 2.7 0.39 10.8 2.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3592 PF12158.8 NODE_52840_length_336_cov_466.352159_g44915_i0forward_frame_3 - 2.5 8.1 4.1 0.7 9.9 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3592) Ras PF00071.22 ORF99085 - 5.3e-06 26.1 0.0 7.7e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 Ras family Bac_DNA_binding PF00216.21 ORF98880 - 4.5e-11 42.8 2.2 6.8e-11 42.2 2.2 1.3 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF98880 - 0.075 13.0 0.4 0.12 12.4 0.4 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal DUF2756 PF10956.8 ORF98880 - 0.076 13.5 0.1 0.19 12.3 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2756) TGBp3 PF02495.17 ORF98621 - 0.63 9.7 4.5 2.4 7.9 4.8 1.7 1 1 1 2 2 2 0 Triple gene block 3 EF-hand_1 PF00036.32 ORF98517 - 1.1e-16 59.1 6.3 1.7e-09 36.5 1.2 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF98517 - 1.6e-14 52.5 4.6 9.6e-09 34.5 0.5 3.2 1 1 2 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF98517 - 8e-13 48.6 2.6 1.1e-12 48.2 2.6 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF98517 - 4.1e-07 29.2 9.3 1.7e-06 27.2 0.9 3.1 2 1 1 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF98517 - 5.8e-07 29.3 5.1 0.0016 18.2 0.6 2.6 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF98517 - 0.00011 22.5 0.1 0.00014 22.2 0.1 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF98517 - 0.00022 21.5 0.1 0.00029 21.1 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain UPF0154 PF03672.13 ORF98517 - 0.0017 18.4 0.4 0.0017 18.4 0.4 2.0 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0154) AAA PF00004.29 ORF98517 - 0.0025 18.2 0.1 0.0028 18.1 0.1 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Caleosin PF05042.13 ORF98517 - 0.038 13.9 3.0 0.22 11.4 0.2 2.0 1 1 1 2 2 2 0 Caleosin related protein DUF3879 PF12995.7 ORF98517 - 0.043 13.5 2.0 1.5 8.5 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function, E. rectale Gene description (DUF3879) Dockerin_1 PF00404.18 ORF98517 - 0.092 13.0 0.7 0.64 10.3 0.8 2.2 1 1 1 2 2 2 0 Dockerin type I domain CTU2 PF10288.9 ORF98032 - 0.049 13.9 2.0 0.18 12.1 2.0 1.9 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 RRN9 PF10680.9 ORF95881 - 0.073 13.4 0.2 0.073 13.4 0.2 2.1 2 0 0 2 2 2 0 RNA polymerase I specific transcription initiation factor PemK_toxin PF02452.17 ORF9546 - 1.7e-22 79.9 0.0 1.9e-22 79.7 0.0 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system Serinc PF03348.15 ORF94765 - 4.5e-17 62.1 14.4 4.9e-17 62.0 14.4 1.0 1 0 0 1 1 1 1 Serine incorporator (Serinc) DUF3161 PF11362.8 ORF94618 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) MIG-14_Wnt-bd PF06664.12 ORF94271 - 0.043 13.0 5.3 0.052 12.8 5.3 1.0 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion DUF2207 PF09972.9 ORF94258 - 0.21 10.3 0.1 0.24 10.1 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4508 PF14969.6 ORF9305 - 0.028 14.7 0.3 0.039 14.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) CDV3 PF15359.6 ORF92325 - 0.22 12.0 2.3 0.27 11.7 2.3 1.1 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 DUF2690 PF10901.8 ORF91975 - 0.029 14.7 0.4 0.035 14.4 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2690) DUF4271 PF14093.6 ORF91847 - 0.017 15.0 3.1 0.02 14.8 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) Sdh_cyt PF01127.22 ORF91847 - 0.025 14.6 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Glycolipid_bind PF06475.11 ORF91632 - 0.075 12.5 0.0 0.098 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative glycolipid-binding Cpn60_TCP1 PF00118.24 ORF90879 - 2.2e-22 79.4 0.2 2.4e-22 79.3 0.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family SL4P PF17618.2 ORF90879 - 0.17 12.0 1.2 0.78 9.8 0.5 2.0 1 1 1 2 2 2 0 Uncharacterized Strongylid L4 protein Cyclin PF08613.11 ORF90110 - 1.5e-13 51.4 0.5 1.8e-13 51.1 0.5 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF90110 - 0.0004 20.1 0.1 0.00049 19.8 0.1 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain UPF0225 PF17775.1 ORF88353 - 0.0017 19.1 0.5 0.0054 17.5 0.5 1.7 1 1 0 1 1 1 1 UPF0225 domain DUF3161 PF11362.8 ORF881 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) Alk_phosphatase PF00245.20 ORF87136 - 0.045 12.7 0.1 0.053 12.5 0.1 1.1 1 0 0 1 1 1 0 Alkaline phosphatase zf-RanBP PF00641.18 ORF87039 - 0.041 13.2 4.7 0.16 11.3 4.4 2.0 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others DUF1966 PF09260.11 ORF8692 - 4.3e-08 33.3 0.3 5.5e-08 33.0 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1966) DUF4458 PF14660.6 ORF8692 - 0.087 13.1 0.1 0.094 13.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4458) TPR_3 PF07720.12 ORF86235 - 0.22 11.5 0.1 0.35 10.9 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat MAGI_u5 PF16666.5 ORF85604 - 0.11 12.7 0.9 0.12 12.5 0.9 1.1 1 0 0 1 1 1 0 Unstructured region on MAGI Lectin_leg-like PF03388.13 ORF84483 - 0.0022 17.4 0.1 0.0025 17.2 0.1 1.1 1 0 0 1 1 1 1 Legume-like lectin family DUF3161 PF11362.8 ORF84104 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) PP2C PF00481.21 ORF83501 - 1.3e-14 54.5 0.0 1.4e-14 54.4 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Peptidase_M24 PF00557.24 ORF83373 - 0.00077 19.2 0.0 0.00088 19.0 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 ATP-cone PF03477.16 ORF83373 - 0.15 12.7 0.1 0.23 12.0 0.1 1.3 1 1 0 1 1 1 0 ATP cone domain SPT_ssu-like PF11779.8 ORF82770 - 0.0079 15.8 2.3 0.0079 15.8 2.3 2.3 3 0 0 3 3 3 1 Small subunit of serine palmitoyltransferase-like Galactosyl_T PF01762.21 ORF82770 - 0.017 15.0 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Galactosyltransferase DUF4042 PF13251.6 ORF82770 - 0.14 11.9 0.2 0.17 11.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) Transglut_core3 PF13471.6 ORF81932 - 2.7 7.9 6.2 0.3 11.0 1.2 1.9 2 1 0 2 2 2 0 Transglutaminase-like superfamily PPR_2 PF13041.6 ORF81643 - 9.9e-12 44.9 0.0 1.9e-06 28.0 0.0 2.1 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF81643 - 2.8e-08 33.7 0.0 4.3e-05 23.5 0.0 2.0 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF81643 - 1.3e-06 28.2 0.1 0.17 12.2 0.0 3.3 3 0 0 3 3 3 2 PPR repeat PPR_1 PF12854.7 ORF81643 - 2.4e-05 23.9 0.0 2.3 8.0 0.0 3.3 3 0 0 3 3 3 3 PPR repeat PPR_long PF17177.4 ORF81643 - 0.0013 18.1 0.0 0.0018 17.7 0.0 1.2 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP ATP-grasp_4 PF13535.6 ORF81643 - 0.045 13.3 0.0 0.056 13.0 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain RNase_P_Rpp14 PF01900.19 ORF81643 - 0.11 12.8 0.3 3.9 7.8 0.3 2.1 1 1 0 1 1 1 0 Rpp14/Pop5 family Transglut_core3 PF13471.6 ORF81427 - 2.7 7.9 6.2 0.3 11.0 1.2 1.9 2 1 0 2 2 2 0 Transglutaminase-like superfamily Phage_holin_3_6 PF07332.11 ORF81172 - 0.04 13.9 1.6 0.048 13.7 1.6 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Amj PF10997.8 ORF80658 - 0.017 14.5 2.3 0.017 14.4 2.3 1.0 1 0 0 1 1 1 0 Alternate to MurJ DUF4596 PF15363.6 ORF80658 - 0.1 12.9 0.9 0.28 11.4 0.9 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4596) Phage_int_SAM_4 PF13495.6 ORF80510 - 0.045 14.2 0.0 0.069 13.6 0.0 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain DUF5385 PF17359.2 ORF79090 - 0.047 13.2 0.8 0.056 13.0 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) ERGIC_N PF13850.6 ORF77966 - 0.0075 16.6 1.0 0.01 16.2 1.0 1.3 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF5113 PF17140.4 ORF77690 - 0.075 12.8 0.4 0.1 12.4 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5113) Pkinase PF00069.25 ORF77616 - 2.3e-28 99.3 0.1 2.5e-28 99.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF77616 - 6.2e-17 61.7 0.0 6.8e-17 61.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF77616 - 9e-07 28.0 0.0 1e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF77616 - 1.4e-05 24.6 0.0 1.6e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF77616 - 0.0089 15.4 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF77616 - 0.012 14.6 0.0 0.014 14.4 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain DUF1801 PF08818.11 ORF77389 - 0.13 12.8 0.1 0.24 11.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DU1801) adh_short PF00106.25 ORF76286 - 4.6e-17 62.1 0.0 5.1e-17 62.0 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF76286 - 4.9e-09 36.1 0.0 5.3e-09 36.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF3161 PF11362.8 ORF75994 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) HisKA PF00512.25 ORF75724 - 1.5e-05 25.0 0.1 4.3e-05 23.5 0.1 1.8 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain Filament PF00038.21 ORF75724 - 0.017 14.7 0.1 0.018 14.6 0.1 1.1 1 0 0 1 1 1 0 Intermediate filament protein WD40 PF00400.32 ORF75335 - 0.0015 19.3 0.0 0.12 13.2 0.0 2.2 2 0 0 2 2 2 1 WD domain, G-beta repeat HELP PF03451.14 ORF75335 - 0.0084 15.9 0.1 0.014 15.2 0.1 1.4 1 0 0 1 1 1 1 HELP motif eIF2A PF08662.11 ORF75335 - 0.014 15.2 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A Fer2 PF00111.27 ORF74405 - 5.1e-16 58.4 3.5 6.7e-16 58.0 3.5 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 ORF74405 - 0.00047 20.1 0.2 0.00097 19.1 0.1 1.6 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Ion_trans PF00520.31 ORF73701 - 1.4e-26 93.2 6.8 1.5e-26 93.1 6.8 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF73701 - 0.00097 17.9 2.7 0.28 9.8 0.5 2.0 1 1 1 2 2 2 2 Polycystin cation channel WD40 PF00400.32 ORF73467 - 7.7e-11 42.4 4.2 1.4e-07 32.1 0.6 4.0 4 0 0 4 4 4 1 WD domain, G-beta repeat PQQ_3 PF13570.6 ORF73467 - 0.0014 19.1 0.0 3.5 8.2 0.0 3.2 3 0 0 3 3 3 2 PQQ-like domain PQQ PF01011.21 ORF73467 - 0.054 13.4 0.1 2.8 8.0 0.0 2.6 3 0 0 3 3 3 0 PQQ enzyme repeat Nup160 PF11715.8 ORF73467 - 0.061 12.0 0.1 0.23 10.1 0.0 1.8 2 1 0 2 2 2 0 Nucleoporin Nup120/160 DUF3161 PF11362.8 ORF72991 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) DUF3161 PF11362.8 ORF72952 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) Neugrin PF06413.11 ORF72028 - 0.06 13.4 4.1 0.072 13.1 4.1 1.3 1 0 0 1 1 1 0 Neugrin CHD5 PF04420.14 ORF72028 - 3.1 7.6 8.2 0.33 10.8 1.9 1.9 1 1 1 2 2 2 0 CHD5-like protein S_layer_N PF05123.12 ORF71829 - 0.011 15.7 0.4 0.011 15.6 0.4 1.0 1 0 0 1 1 1 0 S-layer like family, N-terminal region Rubella_Capsid PF05750.11 ORF71726 - 0.66 9.5 5.4 0.74 9.4 5.4 1.0 1 0 0 1 1 1 0 Rubella capsid protein PDEase_I PF00233.19 ORF70589 - 3.5e-05 23.6 0.0 4.2e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase ADK PF00406.22 ORF70471 - 0.17 12.0 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Adenylate kinase BMC PF00936.19 ORF70149 - 9.6e-28 96.0 5.2 1.2e-27 95.7 5.2 1.1 1 0 0 1 1 1 1 BMC domain PAN_4 PF14295.6 ORF69340 - 0.056 13.4 0.6 8.1 6.4 0.1 2.3 2 0 0 2 2 2 0 PAN domain SCF PF02404.15 ORF68988 - 0.048 13.0 0.0 0.061 12.7 0.0 1.2 1 0 0 1 1 1 0 Stem cell factor ERAP1_C PF11838.8 ORF6784 - 7.5e-09 35.6 0.0 8.8e-09 35.3 0.0 1.1 1 0 0 1 1 1 1 ERAP1-like C-terminal domain DUF802 PF05650.11 ORF6784 - 0.22 12.0 3.0 0.67 10.5 0.6 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF802) Myb_DNA-binding PF00249.31 ORF67815 - 0.039 14.1 0.0 0.12 12.6 0.0 1.8 1 0 0 1 1 1 0 Myb-like DNA-binding domain Cpn60_TCP1 PF00118.24 ORF67762 - 2.2e-22 79.4 0.2 2.4e-22 79.3 0.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family SL4P PF17618.2 ORF67762 - 0.17 12.0 1.2 0.78 9.8 0.5 2.0 1 1 1 2 2 2 0 Uncharacterized Strongylid L4 protein SdiA-regulated PF06977.11 ORF65185 - 0.16 11.2 0.0 0.22 10.7 0.0 1.1 1 0 0 1 1 1 0 SdiA-regulated Mito_carr PF00153.27 ORF64627 - 1.5e-20 72.9 0.3 1.5e-17 63.3 0.1 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein Serine_protease PF18405.1 ORF64627 - 0.0032 16.7 0.1 0.0037 16.5 0.1 1.1 1 0 0 1 1 1 1 Gammaproteobacterial serine protease DUF4508 PF14969.6 ORF6447 - 0.028 14.7 0.3 0.039 14.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) DUF3659 PF12396.8 ORF6392 - 0.032 14.1 2.0 0.032 14.1 2.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3659) Peroxidase_ext PF11895.8 ORF63651 - 0.14 12.1 0.2 0.21 11.5 0.2 1.4 1 0 0 1 1 1 0 Fungal peroxidase extension region Cbl_N3 PF02762.14 ORF63610 - 0.095 12.6 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, SH2-like domain DUF3268 PF11672.8 ORF63224 - 0.033 14.5 0.1 0.04 14.2 0.1 1.2 1 0 0 1 1 1 0 zinc-finger-containing domain Turandot PF07240.11 ORF63196 - 0.75 9.8 0.1 0.75 9.8 0.1 2.2 1 1 1 2 2 2 0 Stress-inducible humoral factor Turandot DUF533 PF04391.12 ORF63196 - 1 8.9 9.1 1.2 8.7 8.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF533) TFIIA PF03153.13 ORF63196 - 6.2 6.7 17.1 6.3 6.7 17.1 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit SHR-BD PF06650.12 ORF62990 - 0.043 13.2 0.0 0.054 12.9 0.0 1.1 1 0 0 1 1 1 0 SHR-binding domain of vacuolar-sorting associated protein 13 Laminin_II PF06009.12 ORF6290 - 0.00094 19.2 2.8 0.0011 19.0 2.8 1.1 1 0 0 1 1 1 1 Laminin Domain II DUF812 PF05667.11 ORF6290 - 0.0056 15.6 5.2 0.0052 15.7 5.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) DUF4600 PF15372.6 ORF6290 - 0.009 16.4 4.1 0.016 15.7 3.9 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4600) Lipoprotein_7 PF01540.16 ORF6290 - 0.02 14.2 3.8 0.019 14.3 3.8 1.1 1 0 0 1 1 1 0 Adhesin lipoprotein TMPIT PF07851.13 ORF6290 - 0.12 11.6 1.4 0.14 11.4 1.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein Sigma70_r4_2 PF08281.12 ORF6290 - 0.2 11.4 0.6 0.3 10.8 0.0 1.6 2 0 0 2 2 2 0 Sigma-70, region 4 YabA PF06156.13 ORF6290 - 0.24 12.1 3.9 0.3 11.8 3.9 1.2 1 0 0 1 1 1 0 Initiation control protein YabA DUF948 PF06103.11 ORF6290 - 2.8 8.2 5.8 3.3 8.0 5.1 1.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) CFC PF09443.10 ORF62049 - 0.25 11.2 3.2 1 9.2 0.3 2.4 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) BC10 PF06726.12 ORF6185 - 0.45 10.8 3.4 2.6 8.3 0.4 2.4 1 1 1 2 2 2 0 Bladder cancer-related protein BC10 HEAT_EZ PF13513.6 ORF61758 - 0.049 14.2 1.2 0.35 11.4 0.7 2.2 2 0 0 2 2 2 0 HEAT-like repeat TMEM210 PF15195.6 ORF61758 - 0.093 13.2 0.1 0.14 12.6 0.1 1.3 1 0 0 1 1 1 0 TMEM210 family Eisosome1 PF12757.7 ORF61646 - 0.04 14.2 0.0 0.042 14.1 0.0 1.2 1 0 0 1 1 1 0 Eisosome protein 1 TetR_C_28 PF17937.1 ORF61379 - 0.073 13.5 1.5 0.55 10.7 0.1 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Peptidase_M24 PF00557.24 ORF60725 - 2.3e-20 73.2 0.1 2.5e-20 73.1 0.1 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 HHH_5 PF14520.6 ORF60123 - 1.7e-05 25.3 0.0 2.4e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Helix-hairpin-helix domain Rad10 PF03834.14 ORF60123 - 0.00061 19.8 0.0 0.0013 18.8 0.0 1.6 1 0 0 1 1 1 1 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) HHH_2 PF12826.7 ORF60123 - 0.00092 19.3 0.0 0.0015 18.6 0.0 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 ORF60123 - 0.0011 19.5 2.4 0.0066 17.0 0.3 2.5 1 1 2 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold HHH_4 PF14490.6 ORF60123 - 0.014 15.4 0.4 0.3 11.1 0.0 2.0 2 0 0 2 2 2 0 Helix-hairpin-helix containing domain Parathyroid PF01279.17 ORF60123 - 0.072 13.7 0.3 0.12 13.1 0.3 1.4 1 0 0 1 1 1 0 Parathyroid hormone family SHIPPO-rpt PF07004.12 ORF60054 - 6.6e-06 26.8 7.5 0.0047 17.8 1.6 2.6 2 1 0 2 2 2 2 Sperm-tail PG-rich repeat SHIPPO-rpt PF07004.12 ORF60052 - 2.3 9.3 8.4 1.4 9.9 0.6 2.7 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat Prefoldin_2 PF01920.20 ORF59883 - 2.5e-15 56.3 11.8 2.9e-15 56.1 11.8 1.0 1 0 0 1 1 1 1 Prefoldin subunit DUF1664 PF07889.12 ORF59883 - 0.023 14.8 1.1 0.023 14.8 1.1 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) CagD PF16567.5 ORF59883 - 0.079 12.7 2.4 0.093 12.5 2.4 1.0 1 0 0 1 1 1 0 Pathogenicity island component CagD Prefoldin PF02996.17 ORF59883 - 0.23 11.4 6.0 0.59 10.1 5.7 1.9 1 1 0 1 1 1 0 Prefoldin subunit TGBp3 PF02495.17 ORF59494 - 0.63 9.7 4.5 2.4 7.9 4.8 1.7 1 1 1 2 2 2 0 Triple gene block 3 SDH_beta PF03315.15 ORF57942 - 0.022 15.1 1.0 0.032 14.6 0.9 1.3 1 1 0 1 1 1 0 Serine dehydratase beta chain DUF1258 PF06869.12 ORF57568 - 0.094 12.2 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) CDT1 PF08839.11 ORF56492 - 0.0023 18.2 0.5 0.0033 17.7 0.5 1.2 1 0 0 1 1 1 1 DNA replication factor CDT1 like DLIC PF05783.11 ORF55953 - 0.21 10.4 3.1 0.24 10.2 3.1 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) DUF4719 PF15843.5 ORF55953 - 0.37 10.9 5.2 0.43 10.7 5.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) RIX1 PF08167.12 ORF55599 - 0.15 11.8 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis EF-hand_6 PF13405.6 ORF55394 - 1.6e-06 27.6 0.3 3.4e-06 26.6 0.3 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF55394 - 2.4e-06 26.7 0.1 4.2e-06 25.9 0.1 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF55394 - 1.8e-05 25.1 0.5 2.2e-05 24.8 0.5 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF55394 - 0.018 14.5 0.0 0.037 13.5 0.0 1.6 1 0 0 1 1 1 0 EF hand Glyco_transf_22 PF03901.17 ORF54864 - 4.1 6.5 7.5 4.6 6.4 7.5 1.1 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family CTU2 PF10288.9 ORF54809 - 0.049 13.9 2.0 0.18 12.1 2.0 1.9 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Fzo_mitofusin PF04799.13 ORF54805 - 0.0015 18.1 0.4 0.0016 18.0 0.4 1.2 1 0 0 1 1 1 1 fzo-like conserved region Rop PF01815.16 ORF54266 - 0.96 9.4 4.1 0.61 10.0 0.4 2.0 1 1 1 2 2 2 0 Rop protein Ank_2 PF12796.7 ORF53998 - 8.6e-08 32.7 0.0 1.1e-07 32.4 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF53998 - 9.7e-08 32.1 0.0 4.5e-07 30.0 0.0 1.9 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF53998 - 4e-05 23.7 0.0 0.0013 19.0 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 ORF53998 - 4.4e-05 23.9 0.0 8.8e-05 23.0 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF53998 - 0.023 15.2 0.0 0.44 11.1 0.0 2.5 2 0 0 2 2 2 0 Ankyrin repeat Salp15 PF12115.8 ORF53998 - 0.096 13.1 1.3 0.88 10.0 0.2 2.2 1 1 1 2 2 2 0 Salivary protein of 15kDa inhibits CD4+ T cell activation Ion_trans PF00520.31 ORF53699 - 0.00021 20.6 1.3 0.00025 20.4 1.3 1.0 1 0 0 1 1 1 1 Ion transport protein DUF2651 PF10852.8 ORF53699 - 0.54 10.9 4.4 0.82 10.3 4.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2651) DUF3161 PF11362.8 ORF53379 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) RCC1 PF00415.18 ORF53220 - 1.2e-10 41.8 0.0 9.2e-09 35.8 0.0 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF53220 - 2e-05 24.3 0.1 0.19 11.6 0.0 3.1 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat Glyco_hydro_59 PF02057.15 ORF52405 - 0.014 14.6 0.1 0.015 14.6 0.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 DUF5442 PF17514.2 ORF52405 - 0.064 13.5 0.1 3.1 8.0 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5442) UcrQ PF02939.16 ORF52175 - 4.2 7.4 9.5 1.9 8.5 0.2 2.9 2 1 1 3 3 3 0 UcrQ family DUF2207 PF09972.9 ORF52175 - 8.7 5.0 9.0 10 4.7 9.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Pkinase PF00069.25 ORF52100 - 5.8e-17 61.9 0.1 6.3e-17 61.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF52100 - 7.7e-09 35.2 0.0 9.9e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF52100 - 0.16 11.5 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUF4431 PF14485.6 ORF51674 - 0.21 11.4 1.4 4 7.3 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) Pkinase PF00069.25 ORF51479 - 4.4e-07 29.5 0.3 6.4e-07 29.0 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain U1snRNP70_N PF12220.8 ORF51019 - 3.2e-08 34.1 0.2 4.2e-08 33.7 0.2 1.2 1 0 0 1 1 1 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Sugar_tr PF00083.24 ORF5068 - 4.7e-10 38.9 10.6 4.7e-10 38.9 10.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter UPF0193 PF05250.11 ORF50638 - 2.1e-11 44.0 1.4 2.1e-11 44.0 1.4 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0193) MFS_1 PF07690.16 ORF49639 - 0.00088 18.3 0.0 0.00089 18.3 0.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily BT1 PF03092.16 ORF49639 - 0.009 14.3 0.0 0.0098 14.2 0.0 1.0 1 0 0 1 1 1 1 BT1 family SPC25 PF06703.11 ORF49639 - 0.025 14.4 0.6 0.032 14.0 0.5 1.3 1 1 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Orf78 PF06024.12 ORF49639 - 0.035 14.4 1.1 0.054 13.8 1.1 1.3 1 0 0 1 1 1 0 Orf78 (ac78) DUF4440 PF14534.6 ORF49147 - 0.00014 22.2 0.0 0.00017 21.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.6 ORF49147 - 0.02 15.2 0.0 0.023 14.9 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like domain SnoaL_2 PF12680.7 ORF49147 - 0.022 15.4 0.0 0.029 15.0 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain CaMKII_AD PF08332.10 ORF49147 - 0.094 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II association domain DUF2140 PF09911.9 ORF48949 - 0.00076 19.1 0.2 0.0036 16.9 0.1 1.9 1 1 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2140) PBECR3 PF18812.1 ORF48949 - 0.003 17.5 0.4 0.0079 16.1 0.2 1.8 1 1 0 2 2 2 1 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 Mago_nashi PF02792.14 ORF48163 - 2.6e-12 47.1 0.0 3.1e-12 46.8 0.0 1.0 1 0 0 1 1 1 1 Mago nashi protein Bac_DNA_binding PF00216.21 ORF4793 - 1.7e-12 47.4 2.0 2.5e-12 46.8 2.0 1.3 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF4793 - 0.094 12.7 0.5 0.15 12.1 0.5 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal Pro-NT_NN PF07421.11 ORF47852 - 0.064 13.5 4.2 0.084 13.1 4.2 1.2 1 0 0 1 1 1 0 Neurotensin/neuromedin N precursor MeaB PF03308.16 ORF47852 - 0.12 11.3 0.8 0.14 11.2 0.8 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ALMT PF11744.8 ORF47852 - 0.13 11.1 3.1 0.15 10.9 3.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF4230 PF14014.6 ORF47852 - 0.15 12.3 4.6 0.045 14.0 1.7 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4230) KIAA1328 PF15369.6 ORF47647 - 0.057 13.2 2.8 0.07 13.0 2.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein KIAA1328 SPT_ssu-like PF11779.8 ORF47300 - 0.0079 15.8 2.3 0.0079 15.8 2.3 2.3 3 0 0 3 3 3 1 Small subunit of serine palmitoyltransferase-like Galactosyl_T PF01762.21 ORF47300 - 0.017 15.0 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Galactosyltransferase DUF4042 PF13251.6 ORF47300 - 0.14 11.9 0.2 0.17 11.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) DUSP PF06337.12 ORF46875 - 0.00053 20.6 0.1 0.00076 20.0 0.1 1.3 1 0 0 1 1 1 1 DUSP domain s48_45 PF07422.13 ORF46875 - 0.032 14.8 0.1 0.037 14.6 0.1 1.2 1 0 0 1 1 1 0 Sexual stage antigen s48/45 domain Pkinase PF00069.25 ORF46102 - 5.8e-17 61.9 0.1 6.3e-17 61.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46102 - 7.7e-09 35.2 0.0 9.9e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF46102 - 0.16 11.5 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Tctex-1 PF03645.13 ORF4604 - 6.2e-24 84.2 0.2 7.2e-24 84.0 0.2 1.0 1 0 0 1 1 1 1 Tctex-1 family AvrRpt-cleavage PF05627.11 ORF4604 - 0.052 12.9 0.4 2.2 7.7 0.1 2.4 2 0 0 2 2 2 0 Cleavage site for pathogenic type III effector avirulence factor Avr LepB_N PF18640.1 ORF46031 - 0.03 13.9 1.5 0.044 13.4 1.5 1.3 1 0 0 1 1 1 0 LepB N-terminal domain DUF848 PF05852.11 ORF4554 - 0.012 15.7 1.2 0.019 15.1 1.2 1.5 1 1 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) MORN PF02493.20 ORF45269 - 1.7 8.7 7.0 5.2 7.2 0.2 4.1 4 1 0 4 4 4 0 MORN repeat Bac_DNA_binding PF00216.21 ORF43401 - 1.7e-12 47.4 2.0 2.5e-12 46.8 2.0 1.3 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF43401 - 0.094 12.7 0.5 0.15 12.1 0.5 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal Ank_5 PF13857.6 ORF42686 - 2.7e-09 37.1 0.0 5.5e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF42686 - 3.2e-08 34.0 0.0 0.00026 21.5 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF42686 - 1.8e-05 25.3 0.0 2.8e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF42686 - 1.8e-05 25.0 0.0 7.8e-05 23.0 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 ORF42686 - 5.2e-05 23.3 0.0 0.00019 21.6 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeat B12D PF06522.11 ORF42456 - 2.5e-11 43.2 0.0 3.4e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 NADH-ubiquinone reductase complex 1 MLRQ subunit Pkinase PF00069.25 ORF42023 - 5.8e-17 61.9 0.1 6.3e-17 61.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42023 - 7.7e-09 35.2 0.0 9.9e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF42023 - 0.16 11.5 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 PI_PP_I PF18363.1 ORF42013 - 0.058 13.6 0.0 0.082 13.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoinositide phosphatase insertion domain TGBp3 PF02495.17 ORF41976 - 0.63 9.7 4.5 2.4 7.9 4.8 1.7 1 1 1 2 2 2 0 Triple gene block 3 TGBp3 PF02495.17 ORF41595 - 0.63 9.7 4.5 2.4 7.9 4.8 1.7 1 1 1 2 2 2 0 Triple gene block 3 Pkinase PF00069.25 ORF4110 - 5.8e-17 61.9 0.1 6.3e-17 61.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4110 - 7.7e-09 35.2 0.0 9.9e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF4110 - 0.16 11.5 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 MSG PF02349.15 ORF40721 - 0.11 12.7 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Major surface glycoprotein Paxillin PF03535.13 ORF40197 - 0.9 9.4 4.7 9.2 6.1 0.5 2.0 1 1 1 2 2 2 0 Paxillin family TGBp3 PF02495.17 ORF39829 - 0.63 9.7 4.5 2.4 7.9 4.8 1.7 1 1 1 2 2 2 0 Triple gene block 3 zf-C2HC_2 PF13913.6 ORF39517 - 5.8e-08 32.4 0.1 9.8e-08 31.7 0.1 1.4 1 0 0 1 1 1 1 zinc-finger of a C2HC-type Rad50_zn_hook PF04423.14 ORF39517 - 0.085 12.7 1.8 0.13 12.1 0.0 2.0 2 0 0 2 2 2 0 Rad50 zinc hook motif Bep_C_terminal PF17841.1 ORF39517 - 0.11 12.7 0.5 0.14 12.4 0.5 1.1 1 0 0 1 1 1 0 BID domain of Bartonella effector protein (Bep) SH3_16 PF18348.1 ORF36771 - 0.026 14.3 0.0 1.8 8.4 0.0 2.3 2 0 0 2 2 2 0 Bacterial dipeptidyl-peptidase Sh3 domain ISP3_C PF18045.1 ORF3650 - 0.00078 19.3 0.0 0.0013 18.6 0.0 1.4 1 1 0 1 1 1 1 ISP3 C-terminal DUF4937 PF16291.5 ORF36056 - 0.15 12.3 0.1 0.19 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4937 DUF3755 PF12579.8 ORF36045 - 0.033 13.8 0.1 0.05 13.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3755) Laminin_II PF06009.12 ORF35529 - 0.00094 19.2 2.8 0.0011 19.0 2.8 1.1 1 0 0 1 1 1 1 Laminin Domain II DUF812 PF05667.11 ORF35529 - 0.0056 15.6 5.2 0.0052 15.7 5.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) DUF4600 PF15372.6 ORF35529 - 0.009 16.4 4.1 0.016 15.7 3.9 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4600) Lipoprotein_7 PF01540.16 ORF35529 - 0.02 14.2 3.8 0.019 14.3 3.8 1.1 1 0 0 1 1 1 0 Adhesin lipoprotein TMPIT PF07851.13 ORF35529 - 0.12 11.6 1.4 0.14 11.4 1.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein Sigma70_r4_2 PF08281.12 ORF35529 - 0.2 11.4 0.6 0.3 10.8 0.0 1.6 2 0 0 2 2 2 0 Sigma-70, region 4 YabA PF06156.13 ORF35529 - 0.24 12.1 3.9 0.3 11.8 3.9 1.2 1 0 0 1 1 1 0 Initiation control protein YabA DUF948 PF06103.11 ORF35529 - 2.8 8.2 5.8 3.3 8.0 5.1 1.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) UCR_hinge PF02320.16 ORF35010 - 4.9e-11 42.7 2.6 7.1e-11 42.2 2.6 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein DUF922 PF06037.11 ORF33485 - 0.074 12.8 0.6 0.095 12.5 0.6 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) HTH_37 PF13744.6 ORF33485 - 0.18 11.8 0.4 1.6 8.7 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain Ribosomal_L13e PF01294.18 ORF33485 - 0.36 10.7 2.2 0.3 10.9 1.1 1.4 2 0 0 2 2 2 0 Ribosomal protein L13e VIT1 PF01988.19 ORF32924 - 0.31 10.9 1.9 0.39 10.6 1.9 1.3 1 1 0 1 1 1 0 VIT family dUTPase PF00692.19 ORF32795 - 0.055 13.2 0.0 0.081 12.6 0.0 1.3 1 0 0 1 1 1 0 dUTPase PX PF00787.24 ORF32487 - 5e-15 55.5 2.4 6.5e-15 55.1 2.4 1.1 1 0 0 1 1 1 1 PX domain DUF4180 PF13788.6 ORF32480 - 0.013 15.4 0.1 0.023 14.6 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4180) LEF-8 PF04941.12 ORF32480 - 0.035 12.4 0.2 0.042 12.1 0.2 1.0 1 0 0 1 1 1 0 Late expression factor 8 (LEF-8) YlbE PF14003.6 ORF32480 - 0.096 13.1 0.1 0.17 12.3 0.1 1.5 1 0 0 1 1 1 0 YlbE-like protein Abhydrolase_3 PF07859.13 ORF31711 - 1.1e-06 28.6 0.0 1.3e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 ORF31711 - 0.029 13.9 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 Dienelactone hydrolase family Pkinase PF00069.25 ORF31598 - 3.9e-20 72.3 0.2 4.2e-20 72.2 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF31598 - 4e-11 42.7 0.0 4.4e-11 42.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF31598 - 0.0033 16.4 0.0 0.0033 16.4 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Pox_ser-thr_kin PF05445.11 ORF31598 - 0.005 15.9 0.1 0.0051 15.8 0.1 1.1 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Pkinase PF00069.25 ORF31448 - 5.8e-17 61.9 0.1 6.3e-17 61.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF31448 - 7.7e-09 35.2 0.0 9.9e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF31448 - 0.16 11.5 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 HTH_50 PF18024.1 ORF31297 - 0.14 11.8 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4529 PF15032.6 ORF31190 - 0.097 11.8 0.0 0.1 11.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) Peptidase_M24 PF00557.24 ORF31129 - 2.3e-20 73.2 0.1 2.5e-20 73.1 0.1 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 Rad60-SLD PF11976.8 ORF30072 - 0.033 14.0 2.5 0.33 10.8 2.5 2.2 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like RHH_4 PF13467.6 ORF30072 - 0.098 12.6 0.3 0.22 11.5 0.3 1.6 1 1 0 1 1 1 0 Ribbon-helix-helix domain dUTPase PF00692.19 ORF30046 - 0.055 13.2 0.0 0.081 12.6 0.0 1.3 1 0 0 1 1 1 0 dUTPase EamA PF00892.20 ORF29897 - 7.2e-10 39.2 9.5 8.4e-10 39.0 9.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family Multi_Drug_Res PF00893.19 ORF29897 - 2.6e-08 34.4 5.2 3.4e-08 34.0 5.2 1.2 1 0 0 1 1 1 1 Small Multidrug Resistance protein TMEM234 PF10639.9 ORF29897 - 5.7e-05 23.1 0.3 0.00011 22.2 0.3 1.5 1 1 1 2 2 2 1 Putative transmembrane family 234 PalH PF08733.10 ORF29897 - 0.049 12.6 1.3 0.059 12.4 1.3 1.2 1 0 0 1 1 1 0 PalH/RIM21 DUF202 PF02656.15 ORF29897 - 0.053 14.0 9.1 0.23 11.9 0.5 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF202) DUF4131 PF13567.6 ORF29897 - 8.6 6.0 9.2 5.6 6.6 7.5 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) SCP2 PF02036.17 ORF29858 - 1.9e-28 98.9 1.1 2.2e-28 98.7 1.1 1.0 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF29858 - 1.4e-07 31.8 0.1 1.5e-07 31.7 0.1 1.0 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal Herpes_pp85 PF04637.12 ORF2973 - 9.5 4.5 7.1 11 4.3 7.1 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Myotub-related PF06602.14 ORF28597 - 0.13 11.2 0.0 0.14 11.1 0.0 1.0 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain Dapper PF15268.6 ORF27626 - 0.11 11.3 1.4 0.12 11.2 1.4 1.0 1 0 0 1 1 1 0 Dapper DeoC PF01791.9 ORF27353 - 6e-12 45.7 0.0 7.5e-12 45.4 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase Ras PF00071.22 ORF26837 - 5.3e-06 26.1 0.0 7.7e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 Ras family Bac_DNA_binding PF00216.21 ORF26818 - 3.7e-11 43.1 1.8 4.8e-11 42.7 1.8 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein Pkinase PF00069.25 ORF26462 - 7.9e-07 28.7 0.0 8.5e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DNA_gyraseB_C PF00986.21 ORF26462 - 0.12 12.6 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 DNA gyrase B subunit, carboxyl terminus Glycolipid_bind PF06475.11 ORF25986 - 0.075 12.5 0.0 0.098 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative glycolipid-binding EF-hand_6 PF13405.6 ORF25498 - 1.6e-06 27.6 0.3 3.4e-06 26.6 0.3 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF25498 - 2.4e-06 26.7 0.1 4.2e-06 25.9 0.1 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF25498 - 1.8e-05 25.1 0.5 2.2e-05 24.8 0.5 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF25498 - 0.018 14.5 0.0 0.037 13.5 0.0 1.6 1 0 0 1 1 1 0 EF hand TGBp3 PF02495.17 ORF25486 - 0.63 9.7 4.5 2.4 7.9 4.8 1.7 1 1 1 2 2 2 0 Triple gene block 3 PspA_IM30 PF04012.12 ORF25281 - 9.3e-06 25.4 12.0 1.8e-05 24.5 12.0 1.5 1 1 0 1 1 1 1 PspA/IM30 family SAM_KSR1 PF13543.6 ORF25281 - 0.023 14.9 0.1 0.033 14.3 0.1 1.3 1 0 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 PhoU PF01895.19 ORF25281 - 0.029 14.8 1.8 0.055 13.9 1.7 1.6 1 1 0 1 1 1 0 PhoU domain Lzipper-MIP1 PF14389.6 ORF25281 - 0.049 13.9 2.5 0.081 13.2 2.3 1.7 1 1 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 TPR_4 PF07721.14 ORF25281 - 0.16 12.7 0.9 0.16 12.7 0.9 2.9 3 1 0 3 3 3 0 Tetratricopeptide repeat GrpE PF01025.19 ORF25281 - 0.2 11.3 3.6 0.22 11.2 3.6 1.2 1 0 0 1 1 1 0 GrpE FlgN PF05130.12 ORF25281 - 0.82 10.2 7.0 2 8.9 6.9 1.7 1 1 0 1 1 1 0 FlgN protein FCD PF07729.12 ORF25281 - 0.98 9.9 12.0 6.2 7.3 0.2 2.1 2 0 0 2 2 2 0 FCD domain HTH_50 PF18024.1 ORF24980 - 0.14 11.8 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Clavanin PF05452.11 ORF24818 - 0.074 13.3 0.4 0.47 10.7 0.0 1.9 2 0 0 2 2 2 0 Clavanin Phage_CRI PF05144.14 ORF24818 - 0.077 12.3 1.1 0.081 12.2 1.1 1.1 1 0 0 1 1 1 0 Phage replication protein CRI Pkinase PF00069.25 ORF24533 - 1.5e-14 54.0 0.0 1.8e-14 53.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Ric8 PF10165.9 ORF2402 - 0.12 11.4 0.3 0.15 11.1 0.3 1.1 1 0 0 1 1 1 0 Guanine nucleotide exchange factor synembryn DUF3161 PF11362.8 ORF23680 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) Mito_carr PF00153.27 ORF23399 - 1.6e-08 34.3 0.0 2e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein PapA_C PF16911.5 ORF23105 - 0.16 12.0 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus P_C10 PF14974.6 ORF21956 - 6.4e-05 23.0 0.8 9.4e-05 22.5 0.8 1.3 1 0 0 1 1 1 1 Protein C10 DUF4241 PF14025.6 ORF21956 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4241) SPT_ssu-like PF11779.8 ORF21895 - 0.0079 15.8 2.3 0.0079 15.8 2.3 2.3 3 0 0 3 3 3 1 Small subunit of serine palmitoyltransferase-like Galactosyl_T PF01762.21 ORF21895 - 0.017 15.0 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Galactosyltransferase DUF4042 PF13251.6 ORF21895 - 0.14 11.9 0.2 0.17 11.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) DUF3268 PF11672.8 ORF21304 - 0.033 14.5 0.1 0.04 14.2 0.1 1.2 1 0 0 1 1 1 0 zinc-finger-containing domain AzlD PF05437.12 ORF20772 - 2.8e-14 53.1 5.9 3.3e-14 52.9 5.9 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) DUF4529 PF15032.6 ORF19936 - 0.097 11.8 0.0 0.1 11.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) Ribosomal_L7Ae PF01248.26 ORF17767 - 8.7e-20 70.3 0.8 1.1e-19 70.0 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LigB PF02900.18 ORF17767 - 0.013 14.6 0.0 0.02 14.0 0.0 1.4 1 1 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase UPF0147 PF03685.13 ORF17767 - 0.092 12.8 0.2 0.13 12.4 0.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) RRM_Rrp7 PF17799.1 ORF17723 - 0.1 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Rrp7 RRM-like N-terminal domain DUF4508 PF14969.6 ORF16944 - 0.028 14.7 0.3 0.039 14.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) hSH3 PF14603.6 ORF16779 - 0.021 15.2 0.6 0.027 14.9 0.6 1.4 1 1 0 1 1 1 0 Helically-extended SH3 domain CxC3 PF18804.1 ORF16411 - 0.16 11.8 3.4 1.3 8.9 0.1 2.6 1 1 2 3 3 3 0 CxC3 like cysteine cluster associated with KDZ transposases WRW PF10206.9 ORF1601 - 0.035 14.5 0.6 0.045 14.1 0.6 1.2 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f Asp_Arg_Hydrox PF05118.15 ORF15566 - 3.6e-18 65.9 0.0 4.2e-18 65.6 0.0 1.1 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase 2OG-FeII_Oxy_3 PF13640.6 ORF15566 - 0.013 16.3 0.0 0.021 15.7 0.0 1.4 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Cupin_2 PF07883.11 ORF15566 - 0.09 12.5 0.2 0.15 11.8 0.0 1.6 2 0 0 2 2 2 0 Cupin domain DUF2312 PF10073.9 ORF15390 - 0.087 12.5 0.2 0.75 9.5 0.5 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Adeno_E1B_55K_N PF04623.12 ORF15264 - 0.21 12.3 1.6 0.38 11.5 0.5 1.8 2 0 0 2 2 2 0 Adenovirus E1B protein N-terminus Involucrin_N PF10583.9 ORF15100 - 0.13 12.8 0.4 0.13 12.8 0.4 1.5 2 0 0 2 2 2 0 Involucrin of squamous epithelia N-terminus FLgD_tudor PF13861.6 ORF14575 - 0.18 12.0 2.9 0.097 12.9 0.8 1.6 2 0 0 2 2 2 0 FlgD Tudor-like domain Aldolase PF01081.19 ORF13878 - 4.1e-06 26.4 0.0 4.9e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 KDPG and KHG aldolase Ecm29 PF13001.7 ORF1375 - 0.11 11.1 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Proteasome stabiliser Prefoldin PF02996.17 ORF13487 - 2.5e-22 79.0 2.8 2.9e-22 78.8 2.8 1.0 1 0 0 1 1 1 1 Prefoldin subunit KxDL PF10241.9 ORF13487 - 0.013 15.7 0.2 0.019 15.2 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein Prefoldin_2 PF01920.20 ORF13487 - 0.048 13.6 0.3 0.048 13.6 0.3 1.8 2 0 0 2 2 2 0 Prefoldin subunit zf-LITAF-like PF10601.9 ORF13438 - 8.2e-06 26.0 4.9 1.2e-05 25.5 4.9 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain eIF-5_eIF-2B PF01873.17 ORF13438 - 0.02 14.7 0.1 0.024 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain found in IF2B/IF5 EF-hand_6 PF13405.6 ORF13322 - 1.6e-06 27.6 0.3 3.4e-06 26.6 0.3 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF13322 - 2.4e-06 26.7 0.1 4.2e-06 25.9 0.1 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF13322 - 1.8e-05 25.1 0.5 2.2e-05 24.8 0.5 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF13322 - 0.018 14.5 0.0 0.037 13.5 0.0 1.6 1 0 0 1 1 1 0 EF hand DUF4639 PF15479.6 ORF12570 - 0.23 10.4 3.1 0.26 10.2 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4639) Pkinase PF00069.25 ORF12512 - 2.3e-26 92.7 0.1 2.5e-26 92.6 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF12512 - 2.4e-15 56.5 0.0 2.6e-15 56.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF12512 - 6.3e-06 25.2 0.0 6.8e-06 25.1 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF12512 - 8.3e-06 25.3 0.0 9.6e-06 25.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF12512 - 0.012 14.9 0.0 0.015 14.7 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF12512 - 0.096 11.6 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 ORF12512 - 0.11 12.1 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Peptidase_S30 PF01577.16 ORF12108 - 0.061 12.9 12.4 0.072 12.7 12.4 1.0 1 0 0 1 1 1 0 Potyvirus P1 protease DUF812 PF05667.11 ORF12108 - 0.071 12.0 15.5 0.082 11.8 15.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) FapA PF03961.13 ORF12108 - 0.33 9.5 15.3 0.36 9.4 15.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A OmpH PF03938.14 ORF12108 - 0.38 11.1 16.2 0.49 10.7 16.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Presenilin PF01080.17 ORF12108 - 1.2 7.8 6.8 1.1 7.9 6.8 1.0 1 0 0 1 1 1 0 Presenilin DUF853 PF05872.12 ORF12108 - 1.6 7.3 7.1 1.9 7.0 7.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) Atrophin-1 PF03154.15 ORF12108 - 4.3 5.5 9.7 4.3 5.5 9.7 1.1 1 0 0 1 1 1 0 Atrophin-1 family Ndc1_Nup PF09531.10 ORF12108 - 5.1 5.6 4.5 6.5 5.3 4.5 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Neur_chan_memb PF02932.16 ORF12108 - 8 6.5 6.3 8.6 6.3 6.3 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Tho2 PF11262.8 ORF12108 - 9.9 5.3 11.8 12 5.0 11.8 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Ras PF00071.22 ORF12094 - 5.7e-14 52.0 0.2 6.8e-14 51.8 0.2 1.1 1 0 0 1 1 1 1 Ras family RsgA_GTPase PF03193.16 ORF12094 - 0.068 13.1 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase UspB PF10625.9 ORF112215 - 1.3e-54 182.7 1.3 1.6e-54 182.4 1.3 1.0 1 0 0 1 1 1 1 Universal stress protein B (UspB) Carb_anhydrase PF00194.21 ORF112094 - 4.3e-16 59.2 0.0 4.3e-16 59.2 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DUF4508 PF14969.6 ORF111856 - 0.028 14.7 0.3 0.039 14.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) DUF3161 PF11362.8 ORF111015 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) Carb_anhydrase PF00194.21 ORF110879 - 3.6e-16 59.5 0.0 3.6e-16 59.5 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase SAM_Exu PF18609.1 ORF109946 - 0.012 15.7 0.1 2.8 8.1 0.0 2.1 2 0 0 2 2 2 0 Exuperantia SAM-like domain Dockerin_1 PF00404.18 ORF109946 - 0.083 13.1 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Dockerin type I domain Clathrin_bdg PF15045.6 ORF109946 - 0.097 12.7 0.4 0.47 10.5 0.0 2.0 2 0 0 2 2 2 0 Clathrin-binding box of Aftiphilin, vesicle trafficking He_PIG PF05345.12 ORF109873 - 0.022 14.9 0.6 0.15 12.3 0.1 2.2 1 1 1 2 2 2 0 Putative Ig domain Phe_hydrox_dim PF07976.12 ORF10940 - 0.078 13.0 0.0 0.096 12.7 0.0 1.1 1 0 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain ATP-synt_8 PF00895.20 ORF109320 - 4.4 7.8 6.0 0.52 10.8 0.3 2.1 2 0 0 2 2 2 0 ATP synthase protein 8 Pkinase PF00069.25 ORF108787 - 2.7e-27 95.8 0.3 3e-27 95.6 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF108787 - 1.6e-14 53.8 0.2 1.8e-14 53.7 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Hint_2 PF13403.6 ORF108787 - 0.092 13.0 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Hint domain TGBp3 PF02495.17 ORF108622 - 0.63 9.7 4.5 2.4 7.9 4.8 1.7 1 1 1 2 2 2 0 Triple gene block 3 TonB_dep_Rec PF00593.24 ORF108325 - 2e-12 47.7 4.0 2.2e-12 47.6 4.0 1.0 1 0 0 1 1 1 1 TonB dependent receptor G-alpha PF00503.20 ORF108053 - 0.17 11.0 0.1 0.18 10.9 0.1 1.1 1 0 0 1 1 1 0 G-protein alpha subunit TGBp3 PF02495.17 ORF106209 - 0.63 9.7 4.5 2.4 7.9 4.8 1.7 1 1 1 2 2 2 0 Triple gene block 3 Methyltransf_23 PF13489.6 ORF106051 - 0.00085 19.2 0.0 0.001 18.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF106051 - 0.0029 18.3 0.0 0.0061 17.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF106051 - 0.032 14.9 0.0 0.062 13.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Rad51 PF08423.11 ORF106051 - 0.075 12.3 0.0 0.085 12.1 0.0 1.0 1 0 0 1 1 1 0 Rad51 Ank_2 PF12796.7 ORF105781 - 3.6e-12 46.7 0.0 4.5e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF105781 - 2.9e-11 43.4 0.1 4.7e-05 23.6 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF105781 - 1.1e-08 35.5 0.0 0.0012 19.3 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF105781 - 1e-06 28.9 0.0 0.046 14.2 0.1 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF105781 - 2.5e-05 24.3 0.0 0.06 13.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat DUF423 PF04241.15 ORF104988 - 0.16 12.2 4.5 0.52 10.5 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF423) LCE6A PF15858.5 ORF104525 - 0.03 15.1 0.3 0.03 15.1 0.3 1.4 2 0 0 2 2 2 0 Late cornified envelope protein 6A family CBFD_NFYB_HMF PF00808.23 ORF104470 - 2.5e-14 53.3 0.0 4.6e-14 52.5 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF104470 - 0.00079 19.8 0.0 0.001 19.4 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID_20kDa PF03847.13 ORF104470 - 0.027 15.0 0.4 0.053 14.0 0.1 1.6 2 0 0 2 2 2 0 Transcription initiation factor TFIID subunit A CENP-T_C PF15511.6 ORF104470 - 0.046 13.9 0.0 0.055 13.6 0.0 1.3 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold SCP2 PF02036.17 ORF104243 - 1.9e-28 98.9 1.1 2.2e-28 98.7 1.1 1.0 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF104243 - 1.4e-07 31.8 0.1 1.5e-07 31.7 0.1 1.0 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal DUF3087 PF11286.8 ORF103951 - 0.046 13.2 0.3 0.065 12.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) SDH_beta PF03315.15 ORF103544 - 0.022 15.1 1.0 0.032 14.6 0.9 1.3 1 1 0 1 1 1 0 Serine dehydratase beta chain SEO_N PF14576.6 ORF102775 - 0.043 13.0 0.0 0.06 12.5 0.0 1.2 1 0 0 1 1 1 0 Sieve element occlusion N-terminus p450 PF00067.22 ORF102440 - 3.8e-19 68.8 0.1 3.8e-19 68.8 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF1097 PF06496.11 ORF102186 - 0.0088 16.2 1.6 0.013 15.6 1.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1097) LapA_dom PF06305.11 ORF102186 - 0.083 12.7 0.8 13 5.7 0.4 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Phage_holin_5_2 PF16079.5 ORF102186 - 0.13 12.6 3.4 0.26 11.6 3.4 1.5 1 0 0 1 1 1 0 Phage holin family Hol44, in holin superfamily V PARP PF00644.20 ORF101960 - 1.6e-11 44.2 2.9 1.8e-06 27.7 0.1 2.0 1 1 1 2 2 2 2 Poly(ADP-ribose) polymerase catalytic domain Pkinase PF00069.25 ORF101767 - 5.8e-17 61.9 0.1 6.3e-17 61.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101767 - 7.7e-09 35.2 0.0 9.9e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF101767 - 0.16 11.5 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUF2704 PF10866.8 ORF101441 - 0.054 13.4 1.9 0.068 13.0 1.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2704) PhnA PF03831.14 ORF101350 - 4e-35 119.5 4.5 4.8e-35 119.3 4.5 1.1 1 0 0 1 1 1 1 PhnA domain PhnA_Zn_Ribbon PF08274.12 ORF101350 - 1.4e-15 56.9 7.1 2.2e-15 56.3 7.1 1.3 1 0 0 1 1 1 1 PhnA Zinc-Ribbon TF_Zn_Ribbon PF08271.12 ORF101350 - 1.1e-05 24.8 1.8 1.1e-05 24.8 1.8 1.8 2 1 0 2 2 2 1 TFIIB zinc-binding zf-RRN7 PF11781.8 ORF101350 - 1.7e-05 24.4 0.9 3.4e-05 23.4 0.9 1.4 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 A2L_zn_ribbon PF08792.10 ORF101350 - 0.0047 16.6 1.5 0.0087 15.8 1.5 1.4 1 0 0 1 1 1 1 A2L zinc ribbon domain PADR1 PF08063.12 ORF101350 - 0.014 15.1 3.1 0.027 14.3 3.1 1.4 1 0 0 1 1 1 0 PADR1 (NUC008) domain zinc-ribbons_6 PF07191.12 ORF101350 - 0.031 14.3 0.8 0.047 13.7 0.8 1.3 1 0 0 1 1 1 0 zinc-ribbons Zn_Tnp_IS1595 PF12760.7 ORF101350 - 0.055 13.4 1.5 0.099 12.6 1.5 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HypA PF01155.19 ORF101350 - 0.11 12.5 0.3 0.22 11.5 0.3 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 ORF101350 - 0.16 11.9 0.8 0.29 11.1 0.8 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain TFIIS_C PF01096.18 ORF101350 - 0.38 10.6 4.2 7.4 6.5 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) UPF0547 PF10571.9 ORF101350 - 0.43 10.7 5.0 0.71 10.0 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf_C2H2_10 PF18414.1 ORF101350 - 1.1 8.9 5.0 10 5.8 0.9 2.4 2 0 0 2 2 2 0 C2H2 type zinc-finger zinc_ribbon_4 PF13717.6 ORF101350 - 3.2 7.8 6.1 62 3.6 6.1 2.5 1 1 0 1 1 1 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 ORF101350 - 6.7 6.7 6.0 17 5.4 1.0 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain TPR_2 PF07719.17 ORF100828 - 6.2e-05 22.8 0.1 0.00011 22.0 0.1 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF100828 - 0.0017 18.1 0.2 0.0031 17.3 0.2 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat DUF5499 PF17603.2 ORF100828 - 0.0066 17.0 1.9 0.0088 16.6 0.0 2.0 2 1 0 2 2 2 1 Family of unknown function (DUF5499) TPR_8 PF13181.6 ORF100828 - 0.023 14.9 0.9 0.035 14.3 0.4 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF100828 - 0.036 14.1 0.0 0.094 12.8 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF100828 - 0.049 13.9 0.0 0.08 13.2 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF100828 - 0.083 12.6 1.1 0.2 11.4 0.1 2.1 1 1 1 2 2 2 0 TPR repeat Ribosomal_S19 PF00203.21 ORF100647 - 5.9e-35 119.0 1.3 7.1e-35 118.8 1.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S19 BCAS3 PF12490.8 ORF100625 - 0.037 13.5 0.3 0.04 13.4 0.3 1.2 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 DUF3136 PF11334.8 NODE_53718_length_328_cov_1.276451_g45790_i0forward_frame_1 - 0.031 14.1 0.4 0.047 13.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) PRMT5 PF05185.16 NODE_53718_length_328_cov_1.276451_g45790_i0forward_frame_1 - 0.11 12.4 1.4 0.14 12.0 1.4 1.1 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase Crust_neurohorm PF01147.17 NODE_53712_length_328_cov_1.406143_g45784_i0reverse_frame_1 - 0.07 13.0 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family PBP1_TM PF14812.6 NODE_53711_length_328_cov_1.450512_g45783_i0forward_frame_1 - 0.14 12.5 0.1 0.22 11.9 0.1 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Arteri_GP4 PF02497.15 NODE_53710_length_328_cov_1.467577_g45782_i0reverse_frame_1 - 0.039 14.1 0.4 0.05 13.8 0.4 1.1 1 0 0 1 1 1 0 Arterivirus glycoprotein VPS9 PF02204.18 NODE_53710_length_328_cov_1.467577_g45782_i0forward_frame_1 - 0.022 14.9 0.1 0.04 14.1 0.1 1.4 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain DUF2417 PF10329.9 NODE_53707_length_328_cov_1.597270_g45779_i0forward_frame_1 - 0.14 11.6 8.2 0.17 11.2 8.2 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) LysR_substrate PF03466.20 NODE_53706_length_328_cov_1.600683_g45778_i0reverse_frame_1 - 1.2e-15 57.4 0.0 1.3e-15 57.4 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks212.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks212.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks212.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks212.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4367 PF14285.6 NODE_53702_length_328_cov_1.747440_g45774_i0forward_frame_1 - 0.00092 19.6 0.7 0.0013 19.2 0.4 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4367) Imm-NTF2-2 PF15631.6 NODE_53699_length_328_cov_1.791809_g45771_i0forward_frame_1 - 5e-11 42.7 0.1 6.7e-11 42.3 0.1 1.2 1 0 0 1 1 1 1 NTF2 fold immunity protein Virul_fac_BrkB PF03631.15 NODE_53695_length_328_cov_1.843003_g45767_i0forward_frame_1 - 0.0012 18.6 0.7 0.0013 18.4 0.7 1.0 1 0 0 1 1 1 1 Virulence factor BrkB zf-RING_10 PF16685.5 NODE_53693_length_328_cov_1.883959_g45765_i0reverse_frame_1 - 0.0049 17.0 0.1 0.0065 16.6 0.1 1.1 1 0 0 1 1 1 1 zinc RING finger of MSL2 Calcyon PF06387.11 NODE_53689_length_328_cov_2.116041_g45761_i0reverse_frame_1 - 0.078 13.0 0.1 0.085 12.8 0.1 1.1 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) Ribosomal_L40e PF01020.17 NODE_53684_length_328_cov_2.225256_g45756_i0reverse_frame_1 - 0.03 14.2 0.6 0.058 13.3 0.6 1.5 1 0 0 1 1 1 0 Ribosomal L40e family CHZ PF09649.10 NODE_53678_length_328_cov_2.552901_g45750_i0forward_frame_1 - 0.12 11.9 1.0 3.2 7.3 1.3 2.5 2 1 0 2 2 2 0 Histone chaperone domain CHZ ABC_membrane PF00664.23 NODE_53674_length_328_cov_2.863481_g45746_i0reverse_frame_1 - 3.6e-05 23.5 2.0 3.8e-05 23.5 2.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Mcp5_PH PF12814.7 NODE_53674_length_328_cov_2.863481_g45746_i0reverse_frame_1 - 0.048 13.8 2.1 0.059 13.5 2.1 1.1 1 0 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology OSTMP1 PF09777.9 NODE_53674_length_328_cov_2.863481_g45746_i0reverse_frame_1 - 0.14 11.5 0.5 0.18 11.2 0.5 1.1 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor FAA_hydrolase_N PF09298.11 NODE_53670_length_328_cov_3.006826_g45742_i0forward_frame_1 - 0.073 13.3 0.3 0.089 13.0 0.3 1.2 1 0 0 1 1 1 0 Fumarylacetoacetase N-terminal PepSY_TM_like_2 PF16357.5 NODE_53670_length_328_cov_3.006826_g45742_i0forward_frame_1 - 0.092 12.7 0.2 0.12 12.3 0.2 1.1 1 0 0 1 1 1 0 Putative PepSY_TM-like YvrJ PF12841.7 NODE_53670_length_328_cov_3.006826_g45742_i0forward_frame_1 - 0.19 11.3 0.4 13 5.4 0.0 2.4 2 0 0 2 2 2 0 YvrJ protein family FGAR-AT_N PF18076.1 NODE_53669_length_328_cov_3.054608_g45741_i0reverse_frame_1 - 0.029 14.3 0.0 0.04 13.9 0.0 1.2 1 0 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase N-terminal DUF3768 PF12599.8 NODE_53668_length_328_cov_3.232082_g45740_i0forward_frame_1 - 0.45 10.6 2.4 0.67 10.0 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3768) BAT2_N PF07001.11 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_1 - 0.96 9.9 8.3 1.1 9.7 8.3 1.0 1 0 0 1 1 1 0 BAT2 N-terminus DUF406 PF04175.12 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_1 - 6.7 7.3 14.9 0.38 11.3 3.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF406) Sec62 PF03839.16 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_1 - 8.9 5.7 15.2 11 5.5 15.2 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Peptidase_M56 PF05569.11 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.0079 15.4 1.5 0.0089 15.3 1.5 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF2207 PF09972.9 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.0088 14.9 0.7 0.011 14.5 0.7 1.4 1 1 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF1676 PF07898.13 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.011 15.8 0.2 0.016 15.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF4400 PF14348.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.018 14.5 3.6 0.022 14.3 3.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) Amnionless PF14828.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.02 13.7 0.7 0.024 13.5 0.7 1.3 1 0 0 1 1 1 0 Amnionless Rax2 PF12768.7 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.039 13.4 3.9 0.049 13.1 3.9 1.1 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Conotoxin PF02950.17 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.072 14.1 0.1 0.072 14.1 0.1 3.4 2 1 0 2 2 1 0 Conotoxin BatD PF13584.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.09 11.6 2.7 0.043 12.6 1.2 1.3 1 1 0 1 1 1 0 Oxygen tolerance Shisa PF13908.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.2 11.9 2.3 0.21 11.8 1.2 1.4 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator DUF5383 PF17355.2 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.64 10.4 11.6 0.025 14.9 5.4 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5383) EVI2A PF05399.11 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 3 7.4 11.4 3.7 7.1 11.0 1.3 1 1 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) SR-25 PF10500.9 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 3.9 7.0 13.1 4.5 6.8 13.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DHHC PF01529.20 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 5.5 7.1 7.1 9.3 6.4 7.1 1.4 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF872 PF05915.12 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 7.8 6.7 7.5 18 5.5 7.5 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) EF-hand_11 PF08976.11 NODE_53657_length_328_cov_46.092150_g45729_i0reverse_frame_1 - 0.13 13.1 0.0 14 6.6 0.0 2.2 1 1 1 2 2 2 0 EF-hand domain Cadherin_tail PF15974.5 NODE_53655_length_328_cov_59.061433_g45727_i0reverse_frame_1 - 0.41 11.0 5.1 0.52 10.7 5.1 1.2 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region WSK PF03832.13 NODE_53649_length_328_cov_68.419795_g45721_i0reverse_frame_1 - 0.0011 18.6 3.8 0.35 10.6 0.7 2.3 2 0 0 2 2 2 2 WSK motif SSP160 PF06933.11 NODE_53649_length_328_cov_68.419795_g45721_i0forward_frame_1 - 0.019 13.2 1.5 0.022 13.0 1.5 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 SCAN PF02023.17 NODE_53639_length_328_cov_83.720137_g45711_i0forward_frame_1 - 0.13 12.1 0.9 0.23 11.3 0.3 1.7 2 0 0 2 2 2 0 SCAN domain DUF778 PF05608.12 NODE_53632_length_328_cov_99.412969_g45705_i0reverse_frame_1 - 0.083 13.2 1.2 0.093 13.1 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF778) RCC1_2 PF13540.6 NODE_53630_length_328_cov_116.064846_g45703_i0reverse_frame_1 - 0.00016 21.4 1.2 0.00033 20.3 1.2 1.5 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_53630_length_328_cov_116.064846_g45703_i0reverse_frame_1 - 0.00023 21.7 3.3 0.00035 21.1 3.3 1.7 1 1 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Toxin_24 PF08094.11 NODE_53627_length_328_cov_125.156997_g45700_i0reverse_frame_1 - 7.6 6.4 8.2 1.5 8.7 1.6 2.2 2 0 0 2 2 2 0 Conotoxin TVIIA/GS family DUF4787 PF16029.5 NODE_53625_length_328_cov_130.385666_g45698_i0reverse_frame_1 - 1.8e-15 56.7 1.7 3.5e-15 55.8 1.7 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4787) HEPN_DZIP3 PF18738.1 NODE_53624_length_328_cov_138.918089_g45697_i0reverse_frame_1 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 DZIP3/ hRUL138-like HEPN DUF4157 PF13699.6 NODE_53617_length_328_cov_173.982935_g45690_i0reverse_frame_1 - 0.057 13.7 0.1 0.077 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) DUF630 PF04783.12 NODE_53614_length_328_cov_248.740614_g45687_i0reverse_frame_1 - 0.023 14.9 0.0 0.045 13.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF630) RFamide_26RFa PF11109.8 NODE_53614_length_328_cov_248.740614_g45687_i0reverse_frame_1 - 0.097 13.2 0.0 0.12 12.9 0.0 1.0 1 0 0 1 1 1 0 Orexigenic neuropeptide Qrfp/P518 Polysacc_synt_C PF14667.6 NODE_53604_length_329_cov_1.360544_g45677_i0forward_frame_1 - 0.0015 18.6 3.1 0.0024 18.0 3.1 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain YgbA_NO PF11756.8 NODE_53598_length_329_cov_1.714286_g45671_i0forward_frame_1 - 0.052 13.9 0.1 0.059 13.7 0.1 1.2 1 0 0 1 1 1 0 Nitrous oxide-stimulated promoter DUF4627 PF15425.6 NODE_53595_length_329_cov_1.891156_g45668_i0forward_frame_1 - 0.035 13.7 0.0 0.048 13.3 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4627) NHL PF01436.21 NODE_53594_length_329_cov_1.918367_g45667_i0reverse_frame_1 - 0.016 15.2 4.7 0.017 15.1 0.2 2.8 3 0 0 3 3 3 0 NHL repeat VirK PF06903.12 NODE_53593_length_329_cov_1.952381_g45666_i0forward_frame_1 - 0.064 13.3 0.1 0.086 12.9 0.1 1.1 1 0 0 1 1 1 0 VirK protein SCHIP-1 PF10148.9 NODE_53589_length_329_cov_2.105442_g45662_i0reverse_frame_1 - 0.0028 17.3 1.0 0.0039 16.9 1.0 1.2 1 0 0 1 1 1 1 Schwannomin-interacting protein 1 zf-C2H2_4 PF13894.6 NODE_53584_length_329_cov_2.251701_g45657_i0forward_frame_1 - 0.0029 18.3 15.0 0.28 12.1 7.3 3.1 3 0 0 3 3 3 2 C2H2-type zinc finger DUF629 PF04780.12 NODE_53584_length_329_cov_2.251701_g45657_i0forward_frame_1 - 0.012 14.2 1.4 0.012 14.2 1.4 1.3 2 0 0 2 2 2 0 Protein of unknown function (DUF629) DUF4763 PF15960.5 NODE_53584_length_329_cov_2.251701_g45657_i0forward_frame_1 - 0.029 13.7 0.7 0.037 13.3 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Herpes_UL7 PF01677.16 NODE_53579_length_329_cov_2.476190_g45652_i0reverse_frame_1 - 0.021 14.6 1.2 0.023 14.4 1.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL7 like zf-C3HC4_2 PF13923.6 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_1 - 0.0027 17.5 1.7 0.04 13.8 0.4 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_1 - 0.023 14.6 0.4 0.064 13.1 0.4 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_1 - 0.034 14.5 0.3 0.37 11.2 0.1 2.2 2 0 0 2 2 2 0 Ring finger domain zf-RING_11 PF17123.5 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_1 - 0.048 13.4 0.6 0.048 13.4 0.6 2.0 2 0 0 2 2 2 0 RING-like zinc finger NUDIX_4 PF14815.6 NODE_53575_length_329_cov_2.778912_g45648_i0forward_frame_1 - 0.059 13.4 0.1 0.066 13.2 0.1 1.1 1 0 0 1 1 1 0 NUDIX domain DUF21 PF01595.20 NODE_53573_length_329_cov_2.996599_g45646_i0forward_frame_1 - 0.032 13.9 0.2 0.038 13.7 0.2 1.1 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain NUDE_C PF04880.13 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_1 - 8.7 6.8 9.0 9.5 6.7 9.0 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region RCC1 PF00415.18 NODE_53563_length_329_cov_48.700680_g45636_i0reverse_frame_1 - 4.5e-05 24.0 0.1 0.028 15.0 0.0 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_53563_length_329_cov_48.700680_g45636_i0reverse_frame_1 - 0.016 15.0 2.9 0.024 14.5 1.9 1.8 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Dsl1_C PF11989.8 NODE_53562_length_329_cov_48.955782_g45635_i0forward_frame_1 - 0.015 15.0 0.1 0.019 14.7 0.1 1.1 1 0 0 1 1 1 0 Retrograde transport protein Dsl1 C terminal MMS19_N PF14500.6 NODE_53552_length_329_cov_70.319728_g45625_i0forward_frame_1 - 0.039 13.5 0.0 0.048 13.2 0.0 1.0 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II DUF4162 PF13732.6 NODE_53550_length_329_cov_74.459184_g45623_i0forward_frame_1 - 0.11 13.3 0.0 0.14 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) TPR_1 PF00515.28 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 2.3e-06 27.2 6.0 0.00052 19.7 0.2 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.0013 18.8 5.2 0.55 10.6 0.1 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.0015 18.5 3.4 0.16 12.2 0.0 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.013 16.0 0.0 0.024 15.2 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.017 14.8 0.2 0.033 13.9 0.2 1.5 1 0 0 1 1 1 0 TPR repeat TPR_17 PF13431.6 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.025 15.0 0.1 0.061 13.7 0.1 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat Rapsyn_N PF10579.9 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.0025 17.9 0.1 0.0035 17.4 0.1 1.3 1 0 0 1 1 1 1 Rapsyn N-terminal myristoylation and linker region TPR_12 PF13424.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.018 15.3 0.6 0.46 10.8 0.0 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.028 14.9 0.2 0.064 13.8 0.1 1.6 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.05 13.6 0.1 4 7.7 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Mur_ligase_C PF02875.21 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.054 13.8 0.0 0.07 13.4 0.0 1.1 1 0 0 1 1 1 0 Mur ligase family, glutamate ligase domain DUF3885 PF13021.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.14 12.3 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3885) TPR_14 PF13428.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.14 13.0 0.1 3.9 8.5 0.0 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.43 10.5 0.2 0.43 10.5 0.2 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.96 9.7 5.8 1.5 9.1 0.6 2.8 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF5637 PF18687.1 NODE_53543_length_329_cov_94.500000_g45616_i0forward_frame_1 - 0.0046 16.9 3.6 0.017 15.1 3.6 2.0 1 1 0 1 1 1 1 Family of unknown function (DUF5637) Dmrt1 PF12374.8 NODE_53542_length_329_cov_101.517007_g45615_i0forward_frame_1 - 0.0054 17.1 4.2 0.0099 16.3 4.2 1.4 1 0 0 1 1 1 1 Double-sex mab3 related transcription factor 1 DUF5429 PF17494.2 NODE_53541_length_329_cov_101.554422_g45614_i0reverse_frame_1 - 0.017 15.1 0.3 0.017 15.1 0.3 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5429) DUF3488 PF11992.8 NODE_53532_length_329_cov_161.057823_g45605_i0reverse_frame_1 - 0.036 13.0 0.0 0.048 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF4620 PF15399.6 NODE_53524_length_329_cov_339.721088_g45597_i0reverse_frame_1 - 0.017 15.4 0.1 0.021 15.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4620) Exo_endo_phos_2 PF14529.6 NODE_53519_length_330_cov_1.189831_g45592_i0reverse_frame_1 - 8.5e-05 22.4 0.0 0.00014 21.7 0.0 1.3 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase YihI PF04220.12 NODE_53513_length_330_cov_1.488136_g45586_i0reverse_frame_1 - 6 6.6 8.7 8.8 6.0 8.7 1.3 1 0 0 1 1 1 0 Der GTPase activator (YihI) EF1G PF00647.19 NODE_53507_length_330_cov_1.671186_g45580_i0reverse_frame_1 - 0.0063 16.6 0.0 0.0087 16.1 0.0 1.2 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain RdRP_1 PF00680.20 NODE_53507_length_330_cov_1.671186_g45580_i0reverse_frame_1 - 0.05 12.1 0.1 0.063 11.8 0.1 1.0 1 0 0 1 1 1 0 RNA dependent RNA polymerase HeLo PF14479.6 NODE_53505_length_330_cov_1.789831_g45578_i0reverse_frame_1 - 0.1 12.4 2.1 0.13 12.1 2.1 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation Pannexin_like PF12534.8 NODE_53505_length_330_cov_1.789831_g45578_i0reverse_frame_1 - 0.9 8.6 3.9 1 8.3 3.9 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 DEP PF00610.21 NODE_53499_length_330_cov_2.061017_g45572_i0reverse_frame_1 - 0.13 12.3 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) Syntaxin-18_N PF10496.9 NODE_53496_length_330_cov_2.200000_g45569_i0forward_frame_1 - 0.02 15.1 2.8 0.069 13.4 2.8 1.9 1 1 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus BRX_assoc PF16627.5 NODE_53477_length_330_cov_8.305085_g45550_i0reverse_frame_1 - 0.039 14.1 2.2 0.17 12.0 0.1 2.2 2 0 0 2 2 2 0 Unstructured region between BRX_N and BRX domain RCC1_2 PF13540.6 NODE_53475_length_330_cov_15.840678_g45548_i0reverse_frame_1 - 1.2e-15 56.8 7.8 4.5e-10 39.1 0.2 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_53475_length_330_cov_15.840678_g45548_i0reverse_frame_1 - 5.4e-06 26.9 8.8 0.2 12.3 0.1 4.1 3 1 1 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat SSP160 PF06933.11 NODE_53471_length_330_cov_41.138983_g45544_i0forward_frame_1 - 0.059 11.6 4.1 0.055 11.7 4.1 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Dicty_REP PF05086.12 NODE_53471_length_330_cov_41.138983_g45544_i0forward_frame_1 - 0.46 8.4 1.3 0.46 8.4 1.3 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein B277 PF17623.2 NODE_53471_length_330_cov_41.138983_g45544_i0forward_frame_1 - 3.9 6.5 5.5 5.2 6.0 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function zf-C2H2_11 PF16622.5 NODE_53469_length_330_cov_52.905085_g45542_i0reverse_frame_1 - 0.14 11.9 4.0 0.29 10.9 4.0 1.5 1 0 0 1 1 1 0 zinc-finger C2H2-type DUF1539 PF07560.11 NODE_53464_length_330_cov_64.501695_g45538_i0forward_frame_1 - 0.03 14.4 4.3 0.036 14.1 3.9 1.4 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1539) PI3K_rbd PF00794.18 NODE_53452_length_330_cov_76.786441_g45526_i0forward_frame_1 - 9.4e-05 22.5 0.0 0.00012 22.2 0.0 1.2 1 0 0 1 1 1 1 PI3-kinase family, ras-binding domain MNE1 PF13762.6 NODE_53448_length_330_cov_90.200000_g45522_i0forward_frame_1 - 0.034 14.1 0.1 0.051 13.6 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component zf-RING_2 PF13639.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 1.8e-07 31.3 10.1 1.8e-07 31.3 10.1 1.5 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 1.2e-05 25.5 9.9 1.9e-05 24.9 9.8 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 1.6e-05 24.8 7.6 3.4e-05 23.8 7.6 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 8.4e-05 22.4 10.8 8.4e-05 22.4 10.8 1.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 9.9e-05 22.1 8.2 0.0002 21.1 8.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.00035 20.2 7.5 0.00035 20.2 7.5 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.0011 18.8 9.6 0.0024 17.7 9.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.0019 18.2 4.9 0.0029 17.6 4.9 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-HC5HC2H_2 PF13832.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.003 17.7 7.6 0.0041 17.3 7.5 1.3 1 1 0 1 1 1 1 PHD-zinc-finger like domain PHD PF00628.29 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.0052 16.6 9.0 0.01 15.7 9.0 1.5 1 0 0 1 1 1 1 PHD-finger zf-RING_5 PF14634.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.013 15.4 9.9 0.013 15.4 9.9 1.6 1 1 0 1 1 1 0 zinc-RING finger domain Zf_RING PF16744.5 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.014 15.5 5.8 0.025 14.7 5.8 1.5 1 0 0 1 1 1 0 KIAA1045 RING finger zf-RING_4 PF14570.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.021 14.6 9.0 0.042 13.7 8.9 1.6 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.072 13.3 8.3 0.44 10.8 6.4 2.6 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Zn_ribbon_17 PF17120.5 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.13 11.9 8.1 0.33 10.6 8.1 1.9 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING-like PF08746.11 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.98 9.8 9.8 0.98 9.8 8.2 1.9 1 1 1 2 2 2 0 RING-like domain zf-C3H2C3 PF17122.5 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 1.3 9.1 11.0 17 5.5 11.1 2.6 1 1 0 1 1 1 0 Zinc-finger Bystin PF05291.11 NODE_53434_length_330_cov_137.291525_g45508_i0forward_frame_1 - 0.094 12.0 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 Bystin Fer2 PF00111.27 NODE_53426_length_330_cov_4876.257627_g45500_i0reverse_frame_1 - 2.3e-05 24.3 0.1 3.7e-05 23.6 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain LRR19-TM PF15176.6 NODE_53424_length_331_cov_0.945946_g45498_i0forward_frame_3 - 6 6.9 6.6 5 7.2 1.9 2.0 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain Baculo_p47 PF05112.12 NODE_53421_length_331_cov_1.635135_g45495_i0reverse_frame_3 - 0.036 13.7 4.5 0.036 13.7 4.5 1.1 1 0 0 1 1 1 0 Baculovirus P47 protein TAFII28 PF04719.14 NODE_53421_length_331_cov_1.635135_g45495_i0forward_frame_3 - 0.05 13.7 0.8 0.15 12.1 0.8 1.9 1 1 0 1 1 1 0 hTAFII28-like protein conserved region POTRA PF07244.15 NODE_53418_length_331_cov_1.881757_g45492_i0forward_frame_3 - 0.11 13.1 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 Surface antigen variable number repeat NotI PF12183.8 NODE_53417_length_331_cov_1.888514_g45491_i0reverse_frame_3 - 0.012 14.9 0.1 0.014 14.8 0.1 1.0 1 0 0 1 1 1 0 Restriction endonuclease NotI SNAD4 PF18750.1 NODE_53416_length_331_cov_1.942568_g45490_i0reverse_frame_3 - 0.073 13.2 0.4 0.11 12.6 0.4 1.3 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 Caprin-1_dimer PF18293.1 NODE_53415_length_331_cov_2.010135_g45489_i0forward_frame_3 - 0.016 15.7 0.3 0.025 15.1 0.1 1.4 2 0 0 2 2 2 0 Caprin-1 dimerization domain DUF1657 PF07870.11 NODE_53415_length_331_cov_2.010135_g45489_i0forward_frame_3 - 0.033 14.1 2.4 0.24 11.3 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1657) DUF5601 PF18151.1 NODE_53415_length_331_cov_2.010135_g45489_i0forward_frame_3 - 0.065 13.6 1.3 0.096 13.0 1.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5601) R-HINP1I PF11463.8 NODE_53415_length_331_cov_2.010135_g45489_i0forward_frame_2 - 0.05 13.0 0.5 0.059 12.8 0.5 1.0 1 0 0 1 1 1 0 R.HinP1I restriction endonuclease SNAPc19 PF15497.6 NODE_53412_length_331_cov_2.111486_g45486_i0reverse_frame_2 - 0.16 12.4 1.4 0.36 11.3 0.2 1.9 1 1 1 2 2 2 0 snRNA-activating protein complex subunit 19, SNAPc subunit 19 MannoseP_isomer PF01050.18 NODE_53409_length_331_cov_2.280405_g45483_i0forward_frame_3 - 1.3e-32 112.8 0.3 1.3e-32 112.7 0.3 1.0 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_2 PF07883.11 NODE_53409_length_331_cov_2.280405_g45483_i0forward_frame_3 - 2.4e-08 33.5 0.0 3.3e-08 33.1 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cpta_toxin PF07254.12 NODE_53408_length_331_cov_2.300676_g45482_i0reverse_frame_2 - 0.069 13.1 0.2 0.078 13.0 0.2 1.1 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system Bacteriocin_II PF01721.18 NODE_53407_length_331_cov_2.378378_g45481_i0reverse_frame_3 - 0.059 13.5 0.1 0.1 12.7 0.1 1.4 1 0 0 1 1 1 0 Class II bacteriocin NAD1 PF18778.1 NODE_53407_length_331_cov_2.378378_g45481_i0forward_frame_2 - 0.081 13.0 0.4 0.11 12.5 0.4 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 SNAD4 PF18750.1 NODE_53407_length_331_cov_2.378378_g45481_i0forward_frame_2 - 0.11 12.6 0.3 0.15 12.2 0.3 1.4 1 1 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 WW PF00397.26 NODE_53398_length_331_cov_2.966216_g45472_i0forward_frame_3 - 0.96 9.6 3.7 15 5.8 0.3 2.3 2 0 0 2 2 2 0 WW domain PTA_PTB PF01515.19 NODE_53397_length_331_cov_3.145270_g45471_i0reverse_frame_2 - 8e-27 94.4 0.1 8.7e-27 94.3 0.1 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase DUF4131 PF13567.6 NODE_53396_length_331_cov_3.449324_g45470_i0forward_frame_3 - 2 8.0 5.8 4.2 7.0 5.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Centro_C10orf90 PF17730.1 NODE_53394_length_331_cov_3.513514_g45468_i0forward_frame_2 - 0.084 11.6 0.1 0.12 11.1 0.1 1.1 1 0 0 1 1 1 0 Centrosomal C10orf90 SF3A2 PF16835.5 NODE_53394_length_331_cov_3.513514_g45468_i0forward_frame_2 - 0.17 12.3 0.0 0.2 12.0 0.0 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) YiiD_C PF09500.10 NODE_53383_length_331_cov_61.959459_g45457_i0reverse_frame_2 - 0.1 12.4 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative thioesterase (yiiD_Cterm) DUF4992 PF16383.5 NODE_53380_length_331_cov_73.868243_g45454_i0reverse_frame_3 - 0.063 12.8 0.7 0.068 12.7 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF2614 PF11023.8 NODE_53380_length_331_cov_73.868243_g45454_i0forward_frame_3 - 9.3 6.4 12.1 0.67 10.1 6.2 1.8 1 1 1 2 2 2 0 Zinc-ribbon containing domain DNA_pol_lambd_f PF10391.9 NODE_53376_length_331_cov_79.614865_g45450_i0reverse_frame_2 - 0.086 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda EFG_II PF14492.6 NODE_53376_length_331_cov_79.614865_g45450_i0reverse_frame_2 - 0.16 12.1 0.1 5.3 7.2 0.1 2.2 2 0 0 2 2 2 0 Elongation Factor G, domain II LapA_dom PF06305.11 NODE_53372_length_331_cov_85.310811_g45446_i0reverse_frame_2 - 0.11 12.3 5.4 0.086 12.7 1.2 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain FmrO PF07091.11 NODE_53371_length_331_cov_88.584459_g45445_i0reverse_frame_2 - 0.15 11.6 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) GCV_T PF01571.21 NODE_53367_length_331_cov_100.878378_g45441_i0forward_frame_2 - 0.064 12.6 0.1 0.3 10.4 0.0 1.8 1 1 1 2 2 2 0 Aminomethyltransferase folate-binding domain Menin PF05053.13 NODE_53365_length_331_cov_117.766892_g45439_i0reverse_frame_3 - 1.4 7.2 7.0 1.6 7.0 7.0 1.1 1 0 0 1 1 1 0 Menin MNNL PF07657.13 NODE_53359_length_331_cov_221.108108_g45433_i0reverse_frame_2 - 0.0034 17.4 0.7 0.004 17.2 0.4 1.3 1 1 0 1 1 1 1 N terminus of Notch ligand DUF5329 PF17263.2 NODE_53352_length_331_cov_820.628378_g45426_i0forward_frame_2 - 0.021 15.0 0.5 0.025 14.8 0.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5329) GATase PF00117.28 NODE_53349_length_331_cov_7976.530405_g45423_i0reverse_frame_2 - 0.058 13.1 0.0 0.067 13.0 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferase class-I CENP-P PF13096.6 NODE_53346_length_332_cov_1.208754_g45420_i0forward_frame_3 - 0.054 13.2 0.4 0.066 12.9 0.4 1.1 1 0 0 1 1 1 0 CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P DUF3417 PF11897.8 NODE_53344_length_332_cov_1.400673_g45418_i0reverse_frame_3 - 0.081 13.4 2.0 0.091 13.2 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3417) DUF2101 PF09874.9 NODE_53342_length_332_cov_1.744108_g45416_i0forward_frame_3 - 2.5 7.8 10.4 3.1 7.4 10.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) zf-RING_4 PF14570.6 NODE_53337_length_332_cov_2.033670_g45411_i0reverse_frame_2 - 0.0098 15.7 1.2 0.0098 15.7 1.2 1.7 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain tRNA-synt_1b PF00579.25 NODE_53337_length_332_cov_2.033670_g45411_i0forward_frame_3 - 3.7e-15 56.0 0.2 5.6e-15 55.4 0.2 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) MarR_2 PF12802.7 NODE_53337_length_332_cov_2.033670_g45411_i0forward_frame_3 - 0.023 14.6 0.1 0.33 10.9 0.1 2.4 2 1 1 3 3 3 0 MarR family ASH PF15780.5 NODE_53335_length_332_cov_2.094276_g45409_i0reverse_frame_3 - 0.013 15.7 0.3 0.053 13.7 0.3 1.8 1 1 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Mito_morph_reg PF14972.6 NODE_53332_length_332_cov_2.239057_g45406_i0reverse_frame_2 - 0.053 13.1 0.1 0.06 12.9 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator Lentiviral_Tat PF02998.14 NODE_53331_length_332_cov_2.282828_g45405_i0reverse_frame_3 - 0.033 14.2 0.0 0.048 13.7 0.0 1.2 1 0 0 1 1 1 0 Lentiviral Tat protein COX2_TM PF02790.15 NODE_53330_length_332_cov_2.316498_g45404_i0reverse_frame_2 - 0.16 12.1 0.9 0.24 11.5 0.1 1.7 2 1 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain Pex24p PF06398.11 NODE_53329_length_332_cov_2.356902_g34327_i1forward_frame_3 - 0.11 11.4 2.3 0.13 11.3 2.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin COX2_TM PF02790.15 NODE_53329_length_332_cov_2.356902_g34327_i1forward_frame_3 - 0.83 9.8 5.0 5.4 7.2 1.1 2.1 1 1 1 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain DUF2721 PF11026.8 NODE_53329_length_332_cov_2.356902_g34327_i1forward_frame_3 - 1.1 9.1 7.7 1.6 8.6 7.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) RRM_1 PF00076.22 NODE_53328_length_332_cov_2.427609_g45403_i0forward_frame_3 - 0.0016 18.2 0.0 0.0022 17.8 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HATPase_c PF02518.26 NODE_53324_length_332_cov_2.673401_g45399_i0reverse_frame_3 - 2.2e-17 63.6 0.1 3e-17 63.2 0.1 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RcsC PF09456.10 NODE_53324_length_332_cov_2.673401_g45399_i0reverse_frame_3 - 1.9e-05 24.5 0.0 3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 RcsC Alpha-Beta-Loop (ABL) FeoB_C PF07664.12 NODE_53324_length_332_cov_2.673401_g45399_i0forward_frame_3 - 0.1 12.3 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Ferrous iron transport protein B C terminus DUF5423 PF17461.2 NODE_53322_length_332_cov_2.824916_g45397_i0forward_frame_3 - 0.045 12.6 1.9 0.057 12.3 1.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Branch PF02485.21 NODE_53321_length_332_cov_2.882155_g45396_i0forward_frame_2 - 0.03 13.8 1.1 0.031 13.8 1.1 1.0 1 0 0 1 1 1 0 Core-2/I-Branching enzyme GAF_3 PF13492.6 NODE_53318_length_332_cov_3.016835_g45393_i0reverse_frame_2 - 9.7e-09 35.7 0.0 1.2e-08 35.3 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 NODE_53318_length_332_cov_3.016835_g45393_i0reverse_frame_2 - 0.1 12.9 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 GAF domain Poxvirus_B22R_C PF13168.6 NODE_53317_length_332_cov_3.104377_g45392_i0forward_frame_3 - 0.12 11.9 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 Poxvirus B22R protein C-terminal Lamprin PF06403.11 NODE_53312_length_332_cov_4.582492_g45387_i0forward_frame_3 - 1.6 8.7 10.9 3.7 7.5 1.7 2.1 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_53312_length_332_cov_4.582492_g45387_i0forward_frame_2 - 0.83 9.6 15.7 0.65 10.0 3.2 2.1 1 1 1 2 2 2 0 Lamprin DUF3675 PF12428.8 NODE_53310_length_332_cov_12.377104_g45385_i0reverse_frame_3 - 0.051 14.1 0.5 0.09 13.3 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) Pkinase PF00069.25 NODE_53310_length_332_cov_12.377104_g45385_i0forward_frame_2 - 0.00052 19.5 1.5 0.00058 19.3 1.5 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_53310_length_332_cov_12.377104_g45385_i0forward_frame_2 - 0.089 12.1 0.3 0.11 11.8 0.3 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase Gyro_capsid PF04162.12 NODE_53308_length_332_cov_15.360269_g45383_i0reverse_frame_3 - 0.028 12.9 6.1 0.029 12.9 6.1 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) DUF4407 PF14362.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.3e-06 26.0 10.7 5.7e-06 25.9 10.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) DUF1640 PF07798.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.7e-05 24.9 14.1 2.3e-05 24.5 14.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) Apolipoprotein PF01442.18 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.6e-05 23.1 11.4 9.7e-05 22.3 11.4 1.4 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF3584 PF12128.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 7.5e-05 20.5 15.2 7.9e-05 20.4 15.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Cor1 PF04803.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.00054 20.2 13.3 0.0017 18.6 12.8 1.9 1 1 0 1 1 1 1 Cor1/Xlr/Xmr conserved region DUF883 PF05957.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.00076 20.0 6.6 0.023 15.3 3.3 2.2 1 1 2 3 3 3 2 Bacterial protein of unknown function (DUF883) Filament PF00038.21 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0013 18.3 14.8 0.0031 17.1 14.8 1.6 1 1 0 1 1 1 1 Intermediate filament protein Phasin PF05597.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0017 18.3 7.8 0.0073 16.3 4.2 2.2 1 1 0 2 2 2 1 Poly(hydroxyalcanoate) granule associated protein (phasin) Baculo_PEP_C PF04513.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0019 18.3 10.1 0.029 14.4 1.2 2.1 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus TSNAXIP1_N PF15739.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.003 17.9 13.7 0.006 16.9 13.7 1.7 1 1 0 1 1 1 1 Translin-associated factor X-interacting N-terminus FAM184 PF15665.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0077 16.0 15.8 0.55 10.0 0.8 2.1 1 1 0 1 1 1 1 Family with sequence similarity 184, A and B MADF_DNA_bdg PF10545.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0093 16.3 6.6 0.41 11.0 0.7 2.6 1 1 1 2 2 2 2 Alcohol dehydrogenase transcription factor Myb/SANT-like Exonuc_VII_L PF02601.15 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0098 15.5 11.6 0.011 15.3 11.6 1.0 1 0 0 1 1 1 1 Exonuclease VII, large subunit Prominin PF05478.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.01 13.8 8.1 0.012 13.7 8.1 1.1 1 0 0 1 1 1 0 Prominin YlqD PF11068.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.012 16.0 18.1 0.28 11.6 10.1 2.1 1 1 1 2 2 2 0 YlqD protein Sds3 PF08598.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.014 15.4 19.6 0.13 12.2 9.8 2.1 1 1 1 2 2 2 0 Sds3-like CotJB PF12652.7 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.015 15.5 5.3 0.38 11.0 0.6 2.5 1 1 1 2 2 2 0 CotJB protein Phage_Mu_Gam PF07352.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.017 15.0 19.1 0.11 12.4 3.5 2.6 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein DUF3150 PF11348.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.021 14.1 6.0 0.72 9.0 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3150) AcylCoA_dehyd_C PF12186.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.021 14.9 6.0 0.35 11.0 0.5 2.4 1 1 2 3 3 2 0 Acyl-CoA dehydrogenase C terminal ApoO PF09769.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.024 14.6 4.8 1.2 9.2 0.5 2.0 1 1 1 2 2 2 0 Apolipoprotein O Mitofilin PF09731.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.024 13.5 15.9 0.032 13.1 15.9 1.2 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Gp58 PF07902.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.026 12.8 8.2 0.027 12.8 8.2 1.0 1 0 0 1 1 1 0 gp58-like protein OmpH PF03938.14 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.046 14.1 18.4 0.059 13.7 17.7 1.5 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4709 PF15821.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.049 13.9 10.3 0.077 13.3 6.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4709) PKK PF12474.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.05 13.7 19.5 0.036 14.2 10.4 2.1 1 1 1 2 2 2 0 Polo kinase kinase TetR_C_24 PF17932.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.055 13.7 3.7 3.6 7.9 0.2 2.7 1 1 2 3 3 3 0 Tetracyclin repressor-like, C-terminal domain DUF5305 PF17231.2 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.059 12.8 6.9 0.71 9.2 1.6 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5305) RRF PF01765.19 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.062 13.3 14.5 0.13 12.2 14.5 1.5 1 1 0 1 1 1 0 Ribosome recycling factor Tup_N PF08581.10 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.07 13.4 19.3 0.92 9.9 4.9 3.5 1 1 1 2 2 2 0 Tup N-terminal DUF725 PF05267.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.075 13.0 8.2 1.1 9.2 1.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF725) DUF2362 PF10154.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.079 11.9 9.8 0.085 11.8 9.8 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2362) TetR_C_13 PF16925.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.09 12.7 2.6 2 8.4 0.1 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PIN_8 PF18476.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.092 12.6 11.2 0.12 12.3 11.2 1.1 1 0 0 1 1 1 0 PIN like domain Muted PF14942.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.097 13.0 17.5 0.032 14.6 7.7 2.2 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein GCP_C_terminal PF04130.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.1 12.0 3.2 0.32 10.4 3.2 1.8 1 1 0 1 1 1 0 Gamma tubulin complex component C-terminal V-ATPase_G_2 PF16999.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.11 12.9 7.9 2.1 8.8 3.4 2.6 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit RRF_GI PF12614.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.12 12.5 4.1 0.15 12.2 4.1 1.1 1 0 0 1 1 1 0 Ribosome recycling factor GLTP PF08718.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.12 12.6 7.7 2.8 8.2 4.0 2.1 1 1 1 2 2 2 0 Glycolipid transfer protein (GLTP) GrpE PF01025.19 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.13 11.9 17.2 1.2 8.8 8.6 2.1 1 1 1 2 2 2 0 GrpE DUF2115 PF09888.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.13 12.7 8.7 0.24 11.9 8.7 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) DUF4618 PF15397.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.16 11.4 17.5 0.72 9.2 17.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) DUF5344 PF17279.2 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.17 12.5 16.1 0.18 12.4 3.3 2.8 1 1 2 3 3 3 0 Family of unknown function (DUF5344) CCDC-167 PF15188.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.17 12.2 19.1 1.2 9.5 10.4 3.3 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF4168 PF13767.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.19 12.9 10.5 16 6.7 10.5 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4168) TolA_bind_tri PF16331.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.21 11.7 17.6 0.47 10.6 1.4 3.5 1 1 1 2 2 2 0 TolA binding protein trimerisation Phage_TAC_4 PF08748.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.23 11.8 4.6 0.37 11.1 0.1 2.2 2 1 0 2 2 2 0 Phage tail assembly chaperone Uso1_p115_C PF04871.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.28 11.5 15.4 2.3 8.6 15.4 2.1 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region HSP70 PF00012.20 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.28 9.3 13.4 0.3 9.2 13.4 1.0 1 0 0 1 1 1 0 Hsp70 protein RTX PF02382.15 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.31 10.7 3.6 0.33 10.6 3.6 1.2 1 0 0 1 1 1 0 N-terminal domain in RTX protein Wx5_PLAF3D7 PF09688.10 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.32 11.0 14.4 0.26 11.3 3.1 2.7 1 1 2 3 3 3 0 Protein of unknown function (Wx5_PLAF3D7) YtxH PF12732.7 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.34 11.5 11.4 1.9 9.1 1.3 2.1 1 1 1 2 2 2 0 YtxH-like protein Nbl1_Borealin_N PF10444.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.38 10.4 12.5 0.85 9.3 0.8 3.4 1 1 2 3 3 3 0 Nbl1 / Borealin N terminal SpmSyn_N PF17950.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.38 11.0 12.2 0.37 11.0 0.7 3.0 1 1 2 3 3 3 0 S-adenosylmethionine decarboxylase N -terminal DUF4455 PF14643.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.41 9.2 16.8 1.1 7.9 16.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4455) V-ATPase_G PF03179.15 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.41 11.2 12.0 1 9.9 11.6 1.8 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit STAT_alpha PF01017.20 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.44 10.4 13.8 0.64 9.9 13.8 1.3 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF5339 PF17274.2 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.45 11.4 14.4 3.3 8.6 6.5 3.4 1 1 2 3 3 3 0 Family of unknown function (DUF5339) DUF1451 PF07295.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.46 10.5 7.4 0.58 10.2 7.4 1.3 1 0 0 1 1 1 0 Zinc-ribbon containing domain FliG_N PF14842.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.48 11.0 5.7 1.8 9.1 0.7 2.1 1 1 1 2 2 2 0 FliG N-terminal domain WXG100 PF06013.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.5 10.6 6.0 8.4 6.7 1.5 2.7 1 1 1 2 2 2 0 Proteins of 100 residues with WXG Aida_N PF08910.10 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.55 10.7 7.2 0.71 10.3 0.9 2.2 1 1 1 2 2 2 0 Aida N-terminus HDV_ag PF01517.18 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.69 9.7 4.7 0.15 11.8 0.3 1.9 1 1 1 2 2 2 0 Hepatitis delta virus delta antigen Mt_ATP-synt_D PF05873.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.71 9.7 12.3 0.3 10.9 2.7 2.2 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) BshC PF10079.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.76 8.4 13.3 0.83 8.3 13.3 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC Med15_fungi PF05397.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.9 9.8 10.5 0.34 11.2 2.4 2.6 1 1 1 2 2 2 0 Mediator complex subunit 15 CENP-H PF05837.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.9 10.0 14.8 1.6 9.2 12.2 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) ApoLp-III PF07464.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.98 9.5 13.7 1.9 8.5 13.7 1.5 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) SAM_Exu PF18609.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1 9.5 8.3 0.35 11.0 0.6 2.8 1 1 2 3 3 3 0 Exuperantia SAM-like domain V_ATPase_I PF01496.19 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.1 7.0 9.3 1.3 6.8 9.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.4 9.0 12.6 2.8 8.0 5.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) AI-2E_transport PF01594.16 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.6 7.8 3.5 2.8 7.0 3.5 1.6 1 1 0 1 1 1 0 AI-2E family transporter DUF1690 PF07956.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.8 9.0 14.9 4.4 7.7 14.9 1.6 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) TetR_C_37 PF18665.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 2 9.1 10.3 1 10.0 2.7 2.7 1 1 2 3 3 3 0 Tetracyclin repressor-like, C-terminal domain RNase_J_C PF17770.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 2.6 9.1 8.7 3.2 8.9 2.5 2.3 1 1 1 2 2 2 0 Ribonuclease J C-terminal domain SPOUT_MTase PF02590.17 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 2.7 8.0 8.2 9.9 6.1 2.3 2.0 1 1 1 2 2 2 0 Predicted SPOUT methyltransferase DUF948 PF06103.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 2.9 8.2 8.2 1.3e+02 2.9 8.2 2.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Adhesin_P1_N PF18652.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 3.2 7.8 17.5 2.9 8.0 2.8 4.0 1 1 1 2 2 2 0 Adhesin P1 N-terminal domain YojJ PF10372.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 3.7 7.7 11.2 0.76 9.9 3.0 2.7 1 1 2 3 3 3 0 Bacterial membrane-spanning protein N-terminus DUF3144 PF11342.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 3.9 7.8 7.5 24 5.3 0.2 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF3144) ACCA PF03255.14 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 4.6 7.1 13.8 6.2 6.7 2.1 2.1 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YabA PF06156.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.1 7.8 15.7 11 6.7 7.3 2.1 1 1 1 2 2 2 0 Initiation control protein YabA Endonuc_Holl PF10107.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.1 6.9 9.7 1.2 9.0 4.9 1.8 1 1 1 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase ZnuA PF01297.17 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.2 6.4 7.8 9.9 5.5 3.7 2.2 1 1 2 3 3 3 0 Zinc-uptake complex component A periplasmic Nup54_57_C PF18570.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.4 6.7 17.8 9.3 5.9 2.4 4.6 2 2 1 4 4 4 0 NUP57/Nup54 C-terminal domain COQ7 PF03232.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 7.2 6.4 11.1 4 7.2 4.5 2.4 1 1 1 2 2 2 0 Ubiquinone biosynthesis protein COQ7 ZYG-11_interact PF05884.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 9.1 5.6 7.2 38 3.6 7.2 1.8 1 1 0 1 1 1 0 Interactor of ZYG-11 TMPIT PF07851.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 9.3 5.4 12.6 18 4.4 12.6 1.6 1 1 0 1 1 1 0 TMPIT-like protein RLL PF10036.9 NODE_53301_length_332_cov_52.555556_g45376_i0reverse_frame_2 - 0.024 14.5 0.3 0.026 14.4 0.3 1.0 1 0 0 1 1 1 0 RNA transcription, translation and transport factor protein CTC1 PF15489.6 NODE_53296_length_332_cov_67.548822_g45371_i0reverse_frame_3 - 0.083 10.4 0.1 0.093 10.2 0.1 1.0 1 0 0 1 1 1 0 CST, telomere maintenance, complex subunit CTC1 QSregVF PF13652.6 NODE_53286_length_332_cov_100.154882_g45361_i0reverse_frame_3 - 0.14 12.2 0.0 0.29 11.2 0.0 1.4 1 1 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor N_BRCA1_IG PF16158.5 NODE_53286_length_332_cov_100.154882_g45361_i0reverse_frame_2 - 0.00059 20.5 0.0 0.00079 20.1 0.0 1.1 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene Microvir_J PF04726.13 NODE_53285_length_332_cov_105.181818_g45360_i0forward_frame_3 - 2.7 8.1 6.0 0.67 10.0 1.0 2.5 3 0 0 3 3 3 0 Microvirus J protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks213.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks213.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks213.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks213.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HSDR_N PF04313.14 NODE_53280_length_332_cov_131.222222_g45355_i0forward_frame_2 - 0.059 13.3 0.2 0.062 13.2 0.2 1.1 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) YliH PF10799.8 NODE_53277_length_332_cov_139.952862_g45352_i0forward_frame_3 - 0.027 14.4 1.3 0.039 13.9 1.3 1.2 1 0 0 1 1 1 0 Biofilm formation protein (YliH/bssR) DUF824 PF05688.11 NODE_53277_length_332_cov_139.952862_g45352_i0forward_frame_3 - 0.059 13.2 0.8 0.11 12.4 0.6 1.5 1 1 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) ABATE PF07336.11 NODE_53277_length_332_cov_139.952862_g45352_i0forward_frame_3 - 0.32 11.7 14.9 0.4 11.4 14.9 1.0 1 0 0 1 1 1 0 Putative stress-induced transcription regulator DUF1644 PF07800.12 NODE_53276_length_332_cov_147.993266_g45351_i0reverse_frame_3 - 0.26 11.3 2.4 3.6 7.6 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1644) WBP-1 PF11669.8 NODE_53272_length_332_cov_186.717172_g45347_i0forward_frame_3 - 0.15 12.7 4.9 0.18 12.4 4.9 1.3 1 0 0 1 1 1 0 WW domain-binding protein 1 7TM_GPCR_Srw PF10324.9 NODE_53269_length_332_cov_229.939394_g45344_i0reverse_frame_2 - 0.017 14.4 2.4 0.019 14.3 2.4 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srw Halogen_Hydrol PF10112.9 NODE_53262_length_332_cov_646.343434_g45337_i0forward_frame_3 - 0.32 11.0 4.8 0.3 11.1 4.8 1.2 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Ndc1_Nup PF09531.10 NODE_53262_length_332_cov_646.343434_g45337_i0forward_frame_3 - 2.5 6.7 7.6 2.4 6.7 7.6 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF2207 PF09972.9 NODE_53262_length_332_cov_646.343434_g45337_i0forward_frame_3 - 5.2 5.7 8.3 5.5 5.6 8.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phenol_monoox PF04663.12 NODE_53257_length_333_cov_1.073826_g45332_i0reverse_frame_3 - 0.0038 17.3 0.4 0.0069 16.5 0.4 1.5 1 1 0 1 1 1 1 Phenol hydroxylase conserved region PBP1_TM PF14812.6 NODE_53257_length_333_cov_1.073826_g45332_i0forward_frame_3 - 0.0061 16.9 0.9 0.0082 16.5 0.9 1.2 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal FGGY_C PF02782.16 NODE_53252_length_333_cov_1.328859_g45327_i0forward_frame_2 - 1.7e-27 96.4 0.0 2e-27 96.2 0.0 1.0 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Zn_Tnp_IS91 PF14319.6 NODE_53248_length_333_cov_1.540268_g45323_i0reverse_frame_3 - 0.081 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain CCDC24 PF15669.5 NODE_53246_length_333_cov_1.580537_g45321_i0reverse_frame_2 - 4.7 7.0 8.2 3.4 7.5 6.6 1.5 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 24 family Herpes_UL49_2 PF04823.12 NODE_53246_length_333_cov_1.580537_g45321_i0reverse_frame_2 - 5.2 7.2 10.2 2.7 8.1 7.7 1.8 1 1 1 2 2 2 0 Herpesvirus UL49 tegument protein Tra_M PF05261.11 NODE_53245_length_333_cov_1.597315_g45320_i0forward_frame_3 - 0.089 12.8 0.3 0.15 12.0 0.1 1.4 1 1 0 1 1 1 0 TraM protein, DNA-binding Tlr3_TMD PF17968.1 NODE_53243_length_333_cov_1.654362_g45318_i0reverse_frame_3 - 0.29 11.3 1.6 0.62 10.3 1.6 1.6 1 0 0 1 1 1 0 Toll-like receptor 3 trans-membrane domain Sigma_reg_C PF13791.6 NODE_53241_length_333_cov_1.744966_g45316_i0forward_frame_3 - 0.014 15.6 0.6 0.016 15.5 0.6 1.1 1 0 0 1 1 1 0 Sigma factor regulator C-terminal Stealth_CR1 PF17101.5 NODE_53241_length_333_cov_1.744966_g45316_i0forward_frame_2 - 0.066 13.0 0.0 0.22 11.3 0.0 1.9 1 0 0 1 1 1 0 Stealth protein CR1, conserved region 1 Ribonuc_L-PSP PF01042.21 NODE_53239_length_333_cov_1.791946_g45314_i0reverse_frame_3 - 0.037 14.0 0.0 0.047 13.7 0.0 1.1 1 0 0 1 1 1 0 Endoribonuclease L-PSP NAD_binding_6 PF08030.12 NODE_53239_length_333_cov_1.791946_g45314_i0reverse_frame_3 - 0.093 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Ferric reductase NAD binding domain FdtA PF05523.11 NODE_53236_length_333_cov_1.912752_g45311_i0reverse_frame_3 - 0.069 12.9 0.2 0.099 12.4 0.2 1.2 1 0 0 1 1 1 0 WxcM-like, C-terminal DAHP_synth_2 PF01474.16 NODE_53235_length_333_cov_1.936242_g45310_i0reverse_frame_3 - 7e-30 103.9 0.0 7.6e-30 103.8 0.0 1.0 1 0 0 1 1 1 1 Class-II DAHP synthetase family DAGAT PF03982.13 NODE_53235_length_333_cov_1.936242_g45310_i0reverse_frame_3 - 0.1 11.5 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Diacylglycerol acyltransferase GUCT PF08152.12 NODE_53231_length_333_cov_2.114094_g45306_i0forward_frame_3 - 9e-05 22.7 0.2 0.00029 21.1 0.1 1.9 2 0 0 2 2 2 1 GUCT (NUC152) domain HiaBD2 PF15403.6 NODE_53231_length_333_cov_2.114094_g45306_i0forward_frame_3 - 0.0047 17.3 0.1 0.0072 16.7 0.1 1.4 1 0 0 1 1 1 1 HiaBD2_N domain of Trimeric autotransporter adhesin (GIN) DUF1672 PF07901.11 NODE_53231_length_333_cov_2.114094_g45306_i0forward_frame_2 - 0.0051 16.2 0.1 0.006 15.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1672) Dynamin_M PF01031.20 NODE_53229_length_333_cov_2.174497_g45304_i0forward_frame_2 - 2.7e-15 56.4 0.2 3e-15 56.2 0.2 1.0 1 0 0 1 1 1 1 Dynamin central region DUF5089 PF17002.5 NODE_53229_length_333_cov_2.174497_g45304_i0forward_frame_2 - 0.018 14.9 0.1 0.021 14.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5089) NADH_4Fe-4S PF10589.9 NODE_53229_length_333_cov_2.174497_g45304_i0forward_frame_2 - 0.1 12.7 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region zf-AN1 PF01428.16 NODE_53228_length_333_cov_2.221477_g45303_i0reverse_frame_2 - 0.013 15.6 1.3 0.031 14.4 0.5 1.9 2 0 0 2 2 2 0 AN1-like Zinc finger FUSC PF04632.12 NODE_53228_length_333_cov_2.221477_g45303_i0forward_frame_2 - 1.9e-26 92.8 3.7 2.3e-26 92.6 3.7 1.1 1 0 0 1 1 1 1 Fusaric acid resistance protein family FUSC_2 PF13515.6 NODE_53228_length_333_cov_2.221477_g45303_i0forward_frame_2 - 4.2e-10 39.8 1.1 5.4e-10 39.5 1.1 1.2 1 0 0 1 1 1 1 Fusaric acid resistance protein-like ArAE_1 PF06081.11 NODE_53228_length_333_cov_2.221477_g45303_i0forward_frame_2 - 0.00015 21.9 0.5 0.00019 21.6 0.5 1.1 1 0 0 1 1 1 1 Aromatic acid exporter family member 1 ALMT PF11744.8 NODE_53228_length_333_cov_2.221477_g45303_i0forward_frame_2 - 0.34 9.7 1.0 0.4 9.4 1.0 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter T-box PF00907.22 NODE_53226_length_333_cov_2.302013_g45301_i0reverse_frame_3 - 0.033 14.5 1.0 0.039 14.2 1.0 1.2 1 0 0 1 1 1 0 T-box tify PF06200.14 NODE_53226_length_333_cov_2.302013_g45301_i0forward_frame_3 - 0.036 13.4 0.1 0.25 10.7 0.0 2.1 1 1 1 2 2 2 0 tify domain TnsE_C PF18623.1 NODE_53225_length_333_cov_2.308725_g45300_i0reverse_frame_2 - 0.0059 16.5 2.7 0.0074 16.2 2.7 1.3 1 0 0 1 1 1 1 TnsE C-terminal domain Sec8_exocyst PF04048.14 NODE_53225_length_333_cov_2.308725_g45300_i0reverse_frame_2 - 0.012 15.5 0.6 0.012 15.5 0.6 2.0 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain Codanin-1_C PF15296.6 NODE_53225_length_333_cov_2.308725_g45300_i0reverse_frame_2 - 0.03 14.4 3.7 0.041 14.0 3.7 1.3 1 1 0 1 1 1 0 Codanin-1 C-terminus DUF2316 PF10078.9 NODE_53225_length_333_cov_2.308725_g45300_i0reverse_frame_2 - 0.06 13.6 3.1 0.17 12.1 3.1 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2316) NYD-SP28 PF14772.6 NODE_53225_length_333_cov_2.308725_g45300_i0reverse_frame_2 - 0.15 12.1 11.9 0.035 14.2 8.1 1.7 1 1 1 2 2 2 0 Sperm tail DUF2408 PF10303.9 NODE_53225_length_333_cov_2.308725_g45300_i0reverse_frame_2 - 0.19 12.3 6.1 0.23 12.0 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Tho2 PF11262.8 NODE_53225_length_333_cov_2.308725_g45300_i0reverse_frame_2 - 0.36 10.0 10.6 0.41 9.8 10.6 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Sds3 PF08598.11 NODE_53225_length_333_cov_2.308725_g45300_i0reverse_frame_2 - 0.44 10.5 11.3 0.58 10.1 11.3 1.1 1 0 0 1 1 1 0 Sds3-like TUDOR PF00567.24 NODE_53225_length_333_cov_2.308725_g45300_i0reverse_frame_2 - 0.67 10.0 6.1 2.1 8.4 0.6 2.1 2 0 0 2 2 2 0 Tudor domain Herpes_U47 PF05467.11 NODE_53225_length_333_cov_2.308725_g45300_i0forward_frame_3 - 0.06 11.5 0.9 0.07 11.3 0.9 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 MerR_1 PF13411.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 6.7e-20 71.0 0.0 9.1e-20 70.5 0.0 1.2 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR PF00376.23 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 2.5e-14 52.7 0.0 4.1e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 MerR family regulatory protein HTH_17 PF12728.7 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 1.5e-06 28.3 0.1 5.7e-06 26.4 0.0 2.0 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_Tnp_1 PF01527.20 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.00025 21.3 0.1 0.00046 20.5 0.1 1.9 1 1 0 1 1 1 1 Transposase HTH_23 PF13384.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.00096 18.9 0.5 0.0077 16.0 0.0 2.4 3 0 0 3 3 3 1 Homeodomain-like domain MerR_2 PF13591.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.0013 18.5 0.0 0.0025 17.7 0.0 1.5 2 0 0 2 2 2 1 MerR HTH family regulatory protein HTH_28 PF13518.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.0027 17.8 0.1 0.017 15.2 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain Terminase_5 PF06056.12 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.0028 17.5 0.1 0.008 16.0 0.0 1.8 2 0 0 2 2 2 1 Putative ATPase subunit of terminase (gpP-like) CReP_N PF10472.9 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.02 13.8 0.0 0.022 13.6 0.0 1.0 1 0 0 1 1 1 0 eIF2-alpha phosphatase phosphorylation constitutive repressor SKA2 PF16740.5 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.024 14.4 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 HTH_Tnp_1_2 PF13022.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.042 14.0 0.0 0.05 13.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase TT_ORF2 PF02957.15 NODE_53222_length_333_cov_2.442953_g45297_i0reverse_frame_2 - 4.9 8.1 13.4 8.3 7.4 4.2 2.1 2 0 0 2 2 2 0 TT viral ORF2 COX4_pro_2 PF07835.12 NODE_53222_length_333_cov_2.442953_g45297_i0forward_frame_3 - 0.49 10.5 4.4 7.5 6.7 0.0 2.5 2 0 0 2 2 2 0 Bacterial aa3 type cytochrome c oxidase subunit IV DUF131 PF01998.17 NODE_53222_length_333_cov_2.442953_g45297_i0forward_frame_3 - 2.3 7.9 6.6 3.3 7.4 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF131 Complex1_LYR PF05347.15 NODE_53219_length_333_cov_2.520134_g45294_i0forward_frame_3 - 0.00038 20.5 0.2 0.0022 18.0 0.1 1.9 2 0 0 2 2 2 1 Complex 1 protein (LYR family) FHIPEP PF00771.20 NODE_53218_length_333_cov_2.536913_g45293_i0reverse_frame_3 - 2.6e-66 224.5 4.6 2.8e-66 224.4 4.6 1.0 1 0 0 1 1 1 1 FHIPEP family TT_ORF2 PF02957.15 NODE_53216_length_333_cov_2.577181_g45291_i0reverse_frame_2 - 6.9 7.6 11.3 8.3 7.4 1.0 2.1 1 1 1 2 2 2 0 TT viral ORF2 HemY_N PF07219.13 NODE_53216_length_333_cov_2.577181_g45291_i0forward_frame_3 - 0.19 11.9 4.3 0.5 10.6 2.4 2.0 2 0 0 2 2 2 0 HemY protein N-terminus DUF131 PF01998.17 NODE_53216_length_333_cov_2.577181_g45291_i0forward_frame_3 - 0.26 11.0 4.8 0.37 10.5 4.8 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF131 COX4_pro_2 PF07835.12 NODE_53216_length_333_cov_2.577181_g45291_i0forward_frame_3 - 1.5 9.0 5.6 7.5 6.7 0.0 2.5 2 0 0 2 2 2 0 Bacterial aa3 type cytochrome c oxidase subunit IV SepZ PF06066.11 NODE_53215_length_333_cov_2.654362_g45290_i0reverse_frame_2 - 0.0088 16.2 0.2 0.012 15.8 0.2 1.2 1 0 0 1 1 1 1 SepZ Sushi PF00084.20 NODE_53215_length_333_cov_2.654362_g45290_i0forward_frame_3 - 0.14 12.7 0.0 0.21 12.2 0.0 1.3 1 0 0 1 1 1 0 Sushi repeat (SCR repeat) OrfB_Zn_ribbon PF07282.11 NODE_53214_length_333_cov_2.687919_g45289_i0reverse_frame_2 - 9.1 6.3 7.3 5.2 7.1 0.6 2.3 1 1 0 2 2 2 0 Putative transposase DNA-binding domain UspB PF10625.9 NODE_53213_length_333_cov_2.691275_g45288_i0reverse_frame_3 - 0.0067 16.4 0.0 0.01 15.8 0.0 1.4 1 1 0 1 1 1 1 Universal stress protein B (UspB) DNA_pol_B_2 PF03175.13 NODE_53209_length_333_cov_3.154362_g45284_i0forward_frame_2 - 4.2e-09 35.8 0.0 4.6e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral TMC PF07810.13 NODE_53207_length_333_cov_3.328859_g45282_i0forward_frame_2 - 0.12 13.0 2.3 0.078 13.6 0.6 1.5 1 1 1 2 2 2 0 TMC domain cNMP_binding PF00027.29 NODE_53205_length_333_cov_3.476510_g45280_i0forward_frame_2 - 0.018 15.1 0.0 0.029 14.4 0.0 1.4 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain CcdA PF07362.12 NODE_53205_length_333_cov_3.476510_g45280_i0forward_frame_2 - 0.045 14.2 0.0 0.061 13.8 0.0 1.2 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA FMN_dh PF01070.18 NODE_53204_length_333_cov_3.513423_g45279_i0forward_frame_2 - 5.2e-26 91.5 0.1 5.5e-26 91.4 0.1 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase UPF0492 PF15744.5 NODE_53203_length_333_cov_4.171141_g45278_i0reverse_frame_2 - 0.17 11.1 0.3 0.16 11.1 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0492 SLT PF01464.20 NODE_53203_length_333_cov_4.171141_g45278_i0forward_frame_3 - 0.002 17.8 0.1 0.0031 17.1 0.1 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain EphA2_TM PF14575.6 NODE_53201_length_333_cov_26.073826_g45276_i0reverse_frame_3 - 6.6 7.7 5.3 7.6 7.5 5.3 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF2651 PF10852.8 NODE_53200_length_333_cov_37.030201_g45275_i0reverse_frame_3 - 0.26 11.9 7.9 0.35 11.5 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2651) Orf78 PF06024.12 NODE_53199_length_333_cov_37.926174_g45274_i0forward_frame_2 - 0.13 12.6 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Orf78 (ac78) p12I PF12233.8 NODE_53198_length_333_cov_39.550336_g45273_i0reverse_frame_3 - 0.12 12.9 2.3 0.13 12.7 1.5 1.5 2 0 0 2 2 2 0 Human adult T cell leukemia/lymphoma virus protein Herpes_UL36 PF03586.13 NODE_53196_length_333_cov_52.030201_g45271_i0reverse_frame_2 - 0.0089 15.4 0.0 0.0095 15.3 0.0 1.1 1 0 0 1 1 1 1 Herpesvirus UL36 tegument protein LrgB PF04172.16 NODE_53196_length_333_cov_52.030201_g45271_i0forward_frame_3 - 0.11 12.0 1.4 0.12 11.9 1.4 1.0 1 0 0 1 1 1 0 LrgB-like family Whi5 PF08528.11 NODE_53192_length_333_cov_60.902685_g45267_i0forward_frame_3 - 0.054 13.1 0.2 0.11 12.2 0.2 1.6 1 0 0 1 1 1 0 Whi5 like Ribosomal_L18 PF17135.4 NODE_53187_length_333_cov_65.788591_g45262_i0reverse_frame_2 - 0.0036 16.7 1.1 0.0036 16.7 1.1 1.4 1 1 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e TMEM43 PF07787.12 NODE_53186_length_333_cov_66.926174_g45261_i0forward_frame_2 - 0.042 13.2 0.8 0.046 13.1 0.8 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 SCIMP PF15050.6 NODE_53180_length_333_cov_69.456376_g45255_i0forward_frame_3 - 0.024 15.1 1.8 0.033 14.7 1.8 1.1 1 0 0 1 1 1 0 SCIMP protein DAGK_cat PF00781.24 NODE_53175_length_333_cov_72.546980_g45250_i0forward_frame_2 - 0.036 13.7 0.0 0.047 13.3 0.0 1.2 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain Glyco_trans_1_2 PF13524.6 NODE_53171_length_333_cov_80.127517_g45246_i0reverse_frame_3 - 0.039 14.3 0.0 0.048 14.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 Peptidase_S68 PF10461.9 NODE_53171_length_333_cov_80.127517_g45246_i0reverse_frame_3 - 0.38 11.0 0.1 0.38 11.0 0.1 2.2 3 0 0 3 3 3 0 Peptidase S68 TRAM_LAG1_CLN8 PF03798.16 NODE_53171_length_333_cov_80.127517_g45246_i0forward_frame_3 - 0.28 10.9 2.8 0.27 11.0 2.8 1.2 1 0 0 1 1 1 0 TLC domain zf-CCCH_4 PF18044.1 NODE_53170_length_333_cov_80.865772_g45245_i0reverse_frame_3 - 0.033 14.0 0.2 0.061 13.2 0.2 1.4 1 0 0 1 1 1 0 CCCH-type zinc finger Sar8_2 PF03058.14 NODE_53168_length_333_cov_81.389262_g45243_i0forward_frame_2 - 0.085 13.4 0.2 0.13 12.9 0.1 1.3 1 1 0 1 1 1 0 Sar8.2 family Med9 PF07544.13 NODE_53158_length_333_cov_95.345638_g45233_i0reverse_frame_2 - 0.022 14.8 1.7 0.032 14.3 1.7 1.2 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Alpha-2-MRAP_N PF06400.11 NODE_53152_length_333_cov_112.929530_g45227_i0forward_frame_3 - 0.021 14.8 1.8 0.047 13.7 1.8 1.6 1 1 0 1 1 1 0 Alpha-2-macroglobulin RAP, N-terminal domain Treacle PF03546.14 NODE_53152_length_333_cov_112.929530_g45227_i0forward_frame_3 - 0.021 13.7 3.3 0.026 13.3 3.3 1.3 1 1 0 1 1 1 0 Treacher Collins syndrome protein Treacle RXT2_N PF08595.11 NODE_53152_length_333_cov_112.929530_g45227_i0forward_frame_3 - 0.052 13.6 6.9 0.058 13.4 6.9 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal PBP1_TM PF14812.6 NODE_53152_length_333_cov_112.929530_g45227_i0forward_frame_3 - 0.11 12.8 11.4 0.049 14.0 8.8 1.6 1 1 1 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal AAA_13 PF13166.6 NODE_53148_length_333_cov_138.218121_g45223_i0reverse_frame_2 - 6.7e-06 25.0 0.2 8.6e-06 24.7 0.2 1.1 1 0 0 1 1 1 1 AAA domain LacY_symp PF01306.19 NODE_53146_length_333_cov_164.023490_g45221_i0forward_frame_3 - 0.13 11.0 0.7 0.18 10.6 0.7 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter TP2 PF01254.18 NODE_53140_length_333_cov_240.496644_g45215_i0reverse_frame_3 - 2.8 8.5 15.2 3.3 8.3 15.2 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 RasGEF_N PF00618.20 NODE_53135_length_333_cov_292.637584_g45210_i0forward_frame_3 - 0.13 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 RasGEF N-terminal motif DUF2434 PF10361.9 NODE_53135_length_333_cov_292.637584_g45210_i0forward_frame_2 - 0.0024 16.9 2.0 0.0028 16.7 2.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2434) Asp_Glu_race_2 PF14669.6 NODE_53135_length_333_cov_292.637584_g45210_i0forward_frame_2 - 0.12 12.0 0.1 0.16 11.6 0.1 1.1 1 0 0 1 1 1 0 Putative aspartate racemase DUF1378 PF07125.11 NODE_53133_length_333_cov_535.738255_g45208_i0forward_frame_3 - 0.041 14.0 0.1 0.095 12.9 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) YajC PF02699.15 NODE_53127_length_333_cov_36475.211409_g45202_i0forward_frame_2 - 4.1 7.3 8.2 10 6.1 2.4 2.1 2 0 0 2 2 2 0 Preprotein translocase subunit OAD_gamma PF04277.13 NODE_53127_length_333_cov_36475.211409_g45202_i0forward_frame_2 - 7 7.3 6.1 15 6.2 0.6 2.1 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain DUF4421 PF14391.6 ORF99953 - 0.12 11.8 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4421) CD20 PF04103.15 ORF99334 - 0.019 15.0 1.3 0.024 14.8 1.3 1.1 1 0 0 1 1 1 0 CD20-like family Fe-S_biosyn PF01521.20 ORF99334 - 0.067 13.4 1.0 0.087 13.0 1.0 1.1 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis Ank_2 PF12796.7 ORF98562 - 3.8e-18 65.8 3.2 5.7e-10 39.7 0.3 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF98562 - 1.3e-11 44.8 0.0 1.1e-05 25.8 0.0 3.0 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF98562 - 2.3e-08 34.1 0.7 1.1e-07 31.9 0.4 2.0 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF98562 - 3.2e-08 33.7 0.7 0.0064 16.9 0.1 3.9 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 ORF98562 - 6.6e-07 29.2 0.0 0.11 13.1 0.0 3.4 4 0 0 4 4 4 2 Ankyrin repeat DUF2701 PF10857.8 ORF97962 - 0.019 15.0 3.3 0.019 15.0 3.3 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2701) ERGIC_N PF13850.6 ORF97438 - 0.013 15.9 0.0 0.014 15.8 0.0 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Anoctamin PF04547.12 ORF95004 - 8.5e-06 24.9 0.1 9.3e-06 24.7 0.1 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel SIP1 PF04938.12 ORF95004 - 0.21 11.3 0.0 0.21 11.2 0.0 1.0 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) RRM_1 PF00076.22 ORF94374 - 1.4e-14 53.7 0.0 2e-14 53.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 ORF94374 - 4.7e-05 23.3 0.0 6.2e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RRM_3 PF08777.11 ORF94374 - 0.023 14.8 0.3 0.045 13.8 0.0 1.6 1 1 0 1 1 1 0 RNA binding motif RRM_occluded PF16842.5 ORF94374 - 0.063 13.1 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Occluded RNA-recognition motif PHM7_cyt PF14703.6 ORF94374 - 0.09 13.0 0.6 0.14 12.4 0.6 1.5 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Nup35_RRM PF05172.13 ORF94374 - 0.13 12.2 0.0 0.18 11.8 0.0 1.5 1 1 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Carb_anhydrase PF00194.21 ORF93546 - 0.002 17.7 0.0 0.0025 17.4 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Shisa PF13908.6 ORF93546 - 0.015 15.5 0.0 0.017 15.4 0.0 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator TMEM154 PF15102.6 ORF93546 - 0.015 15.2 0.0 0.017 15.1 0.0 1.2 1 0 0 1 1 1 0 TMEM154 protein family Pribosyltran_N PF13793.6 ORF93546 - 0.017 15.0 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of ribose phosphate pyrophosphokinase Herpes_gE PF02480.16 ORF93546 - 0.025 13.4 0.0 0.025 13.4 0.0 1.0 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E LST1 PF05083.13 ORF93546 - 0.067 13.5 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 LST-1 protein DAG1 PF05454.11 ORF93546 - 0.067 12.6 0.3 0.079 12.3 0.3 1.2 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) SieB PF14163.6 ORF93546 - 0.094 12.2 0.2 0.14 11.7 0.2 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B Rax2 PF12768.7 ORF93546 - 0.11 11.9 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Cortical protein marker for cell polarity aGPT-Pplase3 PF18746.1 ORF93546 - 0.12 11.7 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 EphA2_TM PF14575.6 ORF93546 - 2.1 9.3 9.0 5 8.1 3.5 2.5 2 1 1 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain GAIN_A PF18619.1 ORF93247 - 0.0047 17.1 0.4 0.012 15.8 0.4 1.7 1 0 0 1 1 1 1 GPCR-Autoproteolysis-INducing (GAIN) subdomain A Ribosomal_L17 PF01196.19 ORF92939 - 0.03 15.2 0.4 0.035 15.0 0.4 1.3 1 1 0 1 1 1 0 Ribosomal protein L17 Prenyltrans PF00432.21 ORF92635 - 0.5 10.2 2.5 0.87 9.4 1.6 1.9 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat Actin PF00022.19 ORF92607 - 0.00025 19.8 0.0 0.00025 19.8 0.0 1.1 1 0 0 1 1 1 1 Actin DNA_binding_2 PF13724.6 ORF91514 - 0.13 12.7 0.8 17 5.9 0.0 2.3 2 0 0 2 2 2 0 DNA-binding domain Strumpellin PF10266.9 ORF9146 - 8.7e-34 116.5 0.1 9.5e-34 116.3 0.1 1.0 1 0 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin zf-RING_2 PF13639.6 ORF90800 - 4.1e-07 30.2 2.2 6.2e-07 29.7 2.2 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF90800 - 4.7e-06 26.4 2.0 6.9e-06 25.8 2.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF90800 - 1.3e-05 24.8 4.9 2.4e-05 24.0 4.9 1.5 1 0 0 1 1 1 1 RING-like zinc finger FANCL_C PF11793.8 ORF90800 - 0.00026 21.1 1.9 0.00043 20.4 1.9 1.4 1 0 0 1 1 1 1 FANCL C-terminal domain zf-rbx1 PF12678.7 ORF90800 - 0.00027 21.1 3.9 0.00056 20.1 3.9 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF90800 - 0.003 17.5 0.9 0.0052 16.8 0.9 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF90800 - 0.0033 17.3 1.7 0.005 16.8 1.7 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF90800 - 0.0039 16.8 1.4 0.0056 16.3 1.4 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 ORF90800 - 0.0089 15.9 2.7 0.016 15.0 2.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF90800 - 0.025 14.7 2.6 0.05 13.7 2.5 1.6 1 1 0 1 1 1 0 RING-variant domain zf-ANAPC11 PF12861.7 ORF90800 - 0.053 13.6 2.1 0.14 12.2 2.1 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Baculo_RING PF05883.11 ORF90800 - 0.059 13.4 1.6 0.084 12.9 1.6 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain DUF4162 PF13732.6 ORF90800 - 0.077 13.7 0.1 0.12 13.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) zf-C3H2C3 PF17122.5 ORF90800 - 0.086 12.9 1.5 0.14 12.2 1.5 1.3 1 0 0 1 1 1 0 Zinc-finger EMP70 PF02990.16 ORF90567 - 0.091 11.4 10.8 0.11 11.1 10.8 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 DUF373 PF04123.13 ORF90567 - 1.8 7.9 7.2 2.6 7.4 6.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF373) Antibiotic_NAT PF02522.14 ORF88038 - 0.03 14.1 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 Aminoglycoside 3-N-acetyltransferase CarD_CdnL_TRCF PF02559.16 ORF88038 - 0.037 14.7 0.1 0.049 14.4 0.1 1.2 1 1 0 1 1 1 0 CarD-like/TRCF domain MFS_1 PF07690.16 ORF87924 - 0.0014 17.6 3.5 0.0016 17.4 3.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Blo-t-5 PF11642.8 ORF87597 - 0.0024 17.8 0.1 0.0037 17.2 0.1 1.3 1 0 0 1 1 1 1 Mite allergen Blo t 5 Kinesin PF00225.23 ORF87543 - 2.1e-26 92.7 4.6 2.4e-26 92.5 4.6 1.0 1 0 0 1 1 1 1 Kinesin motor domain Lactamase_B PF00753.27 ORF87518 - 0.024 14.6 0.9 0.026 14.5 0.9 1.2 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily Ank_2 PF12796.7 ORF874 - 2.7e-05 24.7 0.1 3.9e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF874 - 0.039 14.5 0.1 71 4.5 0.0 3.3 3 1 0 3 3 3 0 Ankyrin repeat Med3 PF11593.8 ORF86969 - 0.88 8.7 6.3 1 8.5 6.3 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Tic110 PF16940.5 ORF86969 - 6.3 5.2 6.1 7 5.0 6.1 1.1 1 0 0 1 1 1 0 Chloroplast envelope transporter DUF745 PF05335.13 ORF86969 - 7.6 6.2 15.4 10 5.8 15.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) HflK_N PF12221.8 ORF85888 - 0.15 12.1 0.2 0.15 12.1 0.2 1.9 2 0 0 2 2 2 0 Bacterial membrane protein N terminal GpcrRhopsn4 PF10192.9 ORF85716 - 1.5e-05 24.6 6.1 1.7e-05 24.4 6.1 1.1 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain Lung_7-TM_R PF06814.13 ORF85716 - 0.0012 18.2 0.4 0.0013 18.0 0.4 1.1 1 0 0 1 1 1 1 Lung seven transmembrane receptor DUF713 PF05218.14 ORF85716 - 0.032 14.0 0.8 0.044 13.5 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF713) Prok-RING_2 PF14445.6 ORF85322 - 0.02 15.0 0.5 0.033 14.4 0.5 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 SH PF01445.17 ORF85322 - 0.28 11.2 0.8 0.47 10.5 0.8 1.3 1 0 0 1 1 1 0 Viral small hydrophobic protein Peptidase_C1 PF00112.23 ORF84830 - 0.00015 21.9 0.3 0.34 11.0 0.0 2.1 1 1 1 2 2 2 2 Papain family cysteine protease BOFC_N PF08977.10 ORF84830 - 0.12 12.4 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Bypass of Forespore C, N terminal MMM1 PF10296.9 ORF84601 - 0.012 14.7 0.2 0.014 14.4 0.2 1.0 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Orf78 PF06024.12 ORF84601 - 0.18 12.2 1.5 1.1 9.6 0.0 2.0 2 0 0 2 2 2 0 Orf78 (ac78) AbfS_sensor PF18225.1 ORF8331 - 0.048 13.6 0.0 0.085 12.8 0.0 1.4 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain DUF5446 PF17522.2 ORF83290 - 0.048 13.8 0.8 0.069 13.3 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5446) Mto2_bdg PF12808.7 ORF83290 - 1.3 9.4 8.6 5.4 7.4 8.6 1.9 1 1 0 1 1 1 0 Micro-tubular organiser Mto1 C-term Mto2-binding region zf-RING_2 PF13639.6 ORF82905 - 4.1e-07 30.2 2.2 6.2e-07 29.7 2.2 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF82905 - 4.7e-06 26.4 2.0 6.9e-06 25.8 2.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF82905 - 1.3e-05 24.8 4.9 2.4e-05 24.0 4.9 1.5 1 0 0 1 1 1 1 RING-like zinc finger FANCL_C PF11793.8 ORF82905 - 0.00026 21.1 1.9 0.00043 20.4 1.9 1.4 1 0 0 1 1 1 1 FANCL C-terminal domain zf-rbx1 PF12678.7 ORF82905 - 0.00027 21.1 3.9 0.00056 20.1 3.9 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF82905 - 0.003 17.5 0.9 0.0052 16.8 0.9 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF82905 - 0.0033 17.3 1.7 0.005 16.8 1.7 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF82905 - 0.0039 16.8 1.4 0.0056 16.3 1.4 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 ORF82905 - 0.0089 15.9 2.7 0.016 15.0 2.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF82905 - 0.025 14.7 2.6 0.05 13.7 2.5 1.6 1 1 0 1 1 1 0 RING-variant domain zf-ANAPC11 PF12861.7 ORF82905 - 0.053 13.6 2.1 0.14 12.2 2.1 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Baculo_RING PF05883.11 ORF82905 - 0.059 13.4 1.6 0.084 12.9 1.6 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain DUF4162 PF13732.6 ORF82905 - 0.077 13.7 0.1 0.12 13.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) zf-C3H2C3 PF17122.5 ORF82905 - 0.086 12.9 1.5 0.14 12.2 1.5 1.3 1 0 0 1 1 1 0 Zinc-finger Peptidase_M1 PF01433.20 ORF8159 - 1.2e-30 106.7 2.8 1.4e-30 106.5 2.8 1.0 1 0 0 1 1 1 1 Peptidase family M1 domain SprT-like PF10263.9 ORF8159 - 0.003 17.4 0.1 0.0033 17.3 0.1 1.3 1 1 0 1 1 1 1 SprT-like family WLM PF08325.10 ORF8159 - 0.04 14.0 0.1 0.056 13.5 0.1 1.2 1 0 0 1 1 1 0 WLM domain Peptidase_M10 PF00413.24 ORF8159 - 0.083 12.7 0.1 0.096 12.5 0.1 1.1 1 0 0 1 1 1 0 Matrixin Abhydrolase_1 PF00561.20 ORF81562 - 2.4e-06 27.4 0.0 2.6e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF81562 - 0.00038 19.8 0.0 0.00038 19.8 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Ser_hydrolase PF06821.13 ORF81562 - 0.0027 17.6 0.0 0.0032 17.4 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase Ndr PF03096.14 ORF81562 - 0.13 10.9 0.0 0.14 10.8 0.0 1.2 1 0 0 1 1 1 0 Ndr family WCCH PF03716.14 ORF81277 - 0.093 12.4 1.6 0.37 10.5 0.2 2.3 2 0 0 2 2 2 0 WCCH motif Ank_2 PF12796.7 ORF80772 - 1.3e-14 54.6 0.0 2.1e-06 28.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF80772 - 5e-13 49.3 0.0 4.7e-06 27.0 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF80772 - 1.2e-11 44.5 0.0 0.024 15.1 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF80772 - 1.6e-10 41.0 0.1 1e-06 28.9 0.0 3.4 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF80772 - 2.4e-10 39.7 0.0 0.066 13.8 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat DPCD PF14913.6 ORF80057 - 3.9e-39 134.0 0.7 4.2e-39 133.9 0.7 1.0 1 0 0 1 1 1 1 DPCD protein family YjbE PF11106.8 ORF79544 - 0.081 13.1 3.6 0.11 12.7 3.6 1.3 1 0 0 1 1 1 0 Exopolysaccharide production protein YjbE DUF2855 PF11017.8 ORF78376 - 0.13 12.0 0.0 0.15 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) IF2_N PF04760.15 ORF77924 - 0.034 14.0 0.1 0.055 13.3 0.1 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region PTS_EIIA_1 PF00358.20 ORF77763 - 7.9e-32 109.7 0.2 9.3e-32 109.5 0.2 1.1 1 0 0 1 1 1 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Biotin_lipoyl_2 PF13533.6 ORF77763 - 0.04 13.8 0.0 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 Biotin-lipoyl like Imm_superinfect PF14373.6 ORF77584 - 0.053 13.4 1.0 0.053 13.4 1.0 1.9 2 0 0 2 2 2 0 Superinfection immunity protein QSOX_Trx1 PF18108.1 ORF77128 - 0.051 13.8 0.5 0.058 13.6 0.5 1.1 1 0 0 1 1 1 0 QSOX Trx-like domain EMP24_GP25L PF01105.24 ORF76319 - 4.6e-14 52.8 0.2 5e-14 52.7 0.2 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD HSDR_N_2 PF13588.6 ORF76319 - 0.028 14.4 0.9 0.035 14.1 0.9 1.1 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) WCCH PF03716.14 ORF75720 - 0.093 12.4 1.6 0.37 10.5 0.2 2.3 2 0 0 2 2 2 0 WCCH motif Ribosomal_L22 PF00237.19 ORF74841 - 1.6e-34 118.2 2.0 1.8e-34 118.1 2.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e CHASE7 PF17151.4 ORF74435 - 0.16 11.5 1.8 0.3 10.7 0.6 1.7 1 1 1 2 2 2 0 Periplasmic sensor domain Myb_DNA-binding PF00249.31 ORF74394 - 3.5e-17 62.3 6.2 1.1e-15 57.5 0.4 2.6 3 0 0 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF74394 - 7.5e-14 51.7 2.3 5.2e-13 49.0 0.1 2.0 2 0 0 2 2 2 1 Myb-like DNA-binding domain SLIDE PF09111.10 ORF74394 - 0.00017 21.6 0.5 0.00032 20.7 0.4 1.4 2 0 0 2 2 2 1 SLIDE Rap1_C PF11626.8 ORF74394 - 0.022 14.8 1.6 1.3 9.1 0.5 2.3 1 1 1 2 2 2 0 TRF2-interacting telomeric protein/Rap1 - C terminal domain CMAS PF02353.20 ORF73850 - 0.0011 18.3 0.1 0.0013 18.1 0.1 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase N6_N4_Mtase PF01555.18 ORF73850 - 0.16 11.6 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 DNA methylase TRAM_LAG1_CLN8 PF03798.16 ORF72854 - 3.6e-09 36.6 3.6 3.6e-09 36.6 3.6 1.1 1 0 0 1 1 1 1 TLC domain Ribonuclease PF00545.20 ORF72229 - 0.00067 20.4 0.0 0.00098 19.8 0.0 1.2 1 0 0 1 1 1 1 ribonuclease Cpn60_TCP1 PF00118.24 ORF71333 - 0.095 11.3 0.1 0.12 11.0 0.1 1.1 1 0 0 1 1 1 0 TCP-1/cpn60 chaperonin family Kdo PF06293.14 ORF70453 - 1.1e-33 116.3 0.2 1.3e-33 116.2 0.2 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Peptidase_M9_N PF08453.10 ORF70453 - 0.054 13.2 0.0 0.12 12.1 0.0 1.6 2 0 0 2 2 2 0 Peptidase family M9 N-terminal DUF5559 PF17714.1 ORF70453 - 0.1 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5559) Regulator_TrmB PF11495.8 ORF70219 - 0.0024 17.1 0.2 0.0028 16.9 0.2 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB Herpes_capsid PF06112.11 ORF69736 - 1.8 8.6 10.2 2.2 8.3 10.2 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein SASRP1 PF15160.6 ORF69667 - 0.065 12.9 0.2 0.094 12.4 0.2 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 MethyltransfD12 PF02086.15 ORF69422 - 9e-21 74.7 0.0 9.9e-21 74.6 0.0 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase DUF2695 PF10905.8 ORF69422 - 0.087 13.1 0.1 0.47 10.7 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2695) DUF569 PF04601.13 ORF69132 - 0.17 11.6 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF569) RCC1 PF00415.18 ORF69006 - 1.7e-15 57.3 0.0 1.1e-11 45.1 0.0 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF69006 - 0.065 13.1 1.2 1.4 8.8 0.2 2.6 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Cpn60_TCP1 PF00118.24 ORF68906 - 2.3e-30 105.7 0.8 2.7e-30 105.5 0.8 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF1441 PF07278.11 ORF68906 - 0.0028 17.6 0.0 0.0052 16.7 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1441) CobS_N PF12556.8 ORF68906 - 0.13 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Cobaltochelatase CobS subunit N terminal LRR_8 PF13855.6 ORF6786 - 4.7e-16 58.3 16.8 1.5e-08 34.3 2.6 3.0 1 1 1 3 3 3 3 Leucine rich repeat LRR_4 PF12799.7 ORF6786 - 1.3e-11 44.5 11.3 2.6e-07 30.9 2.4 3.1 2 1 1 3 3 3 3 Leucine Rich repeats (2 copies) LRR_5 PF13306.6 ORF6786 - 5.9e-05 23.0 5.1 0.0018 18.3 1.2 2.1 1 1 1 2 2 2 2 BspA type Leucine rich repeat region (6 copies) LRR_1 PF00560.33 ORF6786 - 0.00013 22.0 13.2 2.2 9.2 0.0 4.9 5 0 0 5 5 5 3 Leucine Rich Repeat LRR_6 PF13516.6 ORF6786 - 0.0099 15.9 15.7 1.2 9.3 0.1 4.8 5 0 0 5 5 5 3 Leucine Rich repeat LRR_9 PF14580.6 ORF6786 - 0.013 15.0 1.6 0.018 14.6 1.6 1.3 1 0 0 1 1 1 0 Leucine-rich repeat FERM_M PF00373.18 ORF67431 - 0.15 12.5 1.2 0.21 12.0 1.2 1.3 1 0 0 1 1 1 0 FERM central domain Herpes_capsid PF06112.11 ORF6713 - 1.8 8.6 10.2 2.2 8.3 10.2 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF3223 PF11523.8 ORF65776 - 8.7e-22 77.8 0.0 1.1e-21 77.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3223) ATP-cone PF03477.16 ORF65776 - 0.048 14.2 0.0 0.092 13.3 0.0 1.5 2 0 0 2 2 2 0 ATP cone domain AbfS_sensor PF18225.1 ORF65540 - 0.048 13.6 0.0 0.085 12.8 0.0 1.4 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain Kelch_4 PF13418.6 ORF64952 - 0.0097 15.9 2.2 0.71 9.9 0.2 2.9 2 1 0 2 2 2 2 Galactose oxidase, central domain PPE PF00823.19 ORF64780 - 0.011 15.9 0.0 0.019 15.0 0.0 1.4 2 0 0 2 2 2 0 PPE family PseudoU_synth_1 PF01416.20 ORF64379 - 3.6e-06 27.4 0.0 5.1e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 tRNA pseudouridine synthase Rhv PF00073.20 ORF64308 - 0.019 14.6 0.1 0.02 14.5 0.1 1.2 1 0 0 1 1 1 0 picornavirus capsid protein V-SNARE PF05008.15 ORF64200 - 0.039 14.3 2.3 0.14 12.6 1.0 2.2 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus HAP1_N PF04849.13 ORF64048 - 2.1e-05 23.9 0.6 2.2e-05 23.8 0.6 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region APP_N PF02177.16 ORF64048 - 0.0048 17.2 0.7 0.0061 16.9 0.7 1.2 1 0 0 1 1 1 1 Amyloid A4 N-terminal heparin-binding Cortex-I_coil PF09304.10 ORF64048 - 0.0061 16.8 1.2 0.0077 16.4 1.2 1.2 1 0 0 1 1 1 1 Cortexillin I, coiled coil CENP-H PF05837.12 ORF64048 - 0.0083 16.5 2.7 0.012 16.0 2.7 1.2 1 0 0 1 1 1 1 Centromere protein H (CENP-H) FlaC_arch PF05377.11 ORF64048 - 0.0096 16.3 1.0 0.019 15.4 0.1 2.0 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) Nsp1_C PF05064.13 ORF64048 - 0.014 15.2 1.4 0.018 14.8 1.4 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region bZIP_1 PF00170.21 ORF64048 - 0.016 15.3 5.5 0.028 14.5 5.5 1.5 1 0 0 1 1 1 0 bZIP transcription factor YvbH_ext PF11724.8 ORF64048 - 0.037 14.4 0.7 0.21 11.9 0.6 1.9 2 0 0 2 2 2 0 YvbH-like oligomerisation region Prominin PF05478.11 ORF64048 - 0.066 11.2 1.8 0.076 11.0 1.8 1.0 1 0 0 1 1 1 0 Prominin PRANC PF09372.10 ORF64048 - 0.14 12.5 5.1 0.36 11.2 4.4 1.8 1 1 1 2 2 2 0 PRANC domain DUF2951 PF11166.8 ORF64048 - 0.34 11.2 4.5 0.28 11.4 1.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) TMPIT PF07851.13 ORF64048 - 0.44 9.8 2.9 0.44 9.7 2.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein DivIC PF04977.15 ORF64048 - 0.9 9.4 3.9 3.5 7.5 3.8 1.9 1 1 0 1 1 1 0 Septum formation initiator Fib_alpha PF08702.10 ORF64048 - 0.95 9.6 7.9 6.8 6.9 8.3 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Turandot PF07240.11 ORF64048 - 1.3 9.0 4.3 2.9 7.9 0.4 2.1 1 1 1 2 2 2 0 Stress-inducible humoral factor Turandot DUF3343 PF11823.8 ORF63694 - 0.028 13.9 0.1 0.047 13.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) MOR2-PAG1_C PF14225.6 ORF6327 - 0.066 13.1 0.0 0.076 12.9 0.0 1.0 1 0 0 1 1 1 0 Cell morphogenesis C-terminal MFS_1 PF07690.16 ORF63244 - 0.00091 18.2 0.0 0.0013 17.7 0.0 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF2681 PF10883.8 ORF63244 - 0.098 13.1 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) L_protein_N PF15518.6 ORF62966 - 0.029 14.2 0.3 0.037 13.9 0.3 1.4 1 1 0 1 1 1 0 L protein N-terminus FANCL_C PF11793.8 ORF62091 - 0.37 11.0 2.9 0.65 10.2 0.4 2.2 2 1 0 2 2 2 0 FANCL C-terminal domain MIF PF01187.18 ORF61427 - 0.0012 19.1 0.3 0.0015 18.8 0.3 1.2 1 0 0 1 1 1 1 Macrophage migration inhibitory factor (MIF) Tautomerase PF01361.21 ORF61427 - 0.0013 18.6 0.2 0.0025 17.7 0.2 1.5 1 1 0 1 1 1 1 Tautomerase enzyme VP4_helical PF17478.2 ORF61427 - 0.1 12.0 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP4 helical domain MIF PF01187.18 ORF60438 - 0.0012 19.1 0.3 0.0015 18.8 0.3 1.2 1 0 0 1 1 1 1 Macrophage migration inhibitory factor (MIF) Tautomerase PF01361.21 ORF60438 - 0.0013 18.6 0.2 0.0025 17.7 0.2 1.5 1 1 0 1 1 1 1 Tautomerase enzyme VP4_helical PF17478.2 ORF60438 - 0.1 12.0 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP4 helical domain Rad10 PF03834.14 ORF60122 - 4.2e-14 52.5 0.4 5.2e-14 52.2 0.4 1.1 1 0 0 1 1 1 1 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) DUF4352 PF11611.8 ORF59713 - 3e-05 24.3 0.2 4.6e-05 23.7 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4352) DUF3237 PF11578.8 ORF59713 - 0.053 13.4 0.5 0.33 10.8 0.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3237) APP_E2 PF12925.7 ORF58997 - 0.00097 18.9 5.7 0.0012 18.5 5.4 1.4 1 1 0 1 1 1 1 E2 domain of amyloid precursor protein F-112 PF09645.10 ORF58997 - 0.0029 17.7 3.6 0.0035 17.4 3.6 1.1 1 0 0 1 1 1 1 F-112 protein DUF4456 PF14644.6 ORF58997 - 0.0061 16.3 3.1 0.0075 16.0 2.8 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4456) Methyltransf_32 PF13679.6 ORF58997 - 0.011 15.7 1.0 0.014 15.4 1.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain HGD-D PF06050.13 ORF58997 - 0.031 14.1 1.2 0.029 14.2 1.2 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component DUF4407 PF14362.6 ORF58997 - 0.12 11.7 2.5 0.15 11.4 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3959 PF13105.6 ORF58997 - 0.16 11.4 3.0 0.19 11.2 3.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) TMIE PF16038.5 ORF58997 - 1.7 8.6 8.3 1.8 8.5 6.3 2.1 1 1 1 2 2 2 0 TMIE protein Chal_sti_synt_N PF00195.19 ORF58716 - 0.16 11.4 0.3 0.2 11.1 0.3 1.1 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain Tlr3_TMD PF17968.1 ORF58699 - 0.13 12.5 1.5 0.29 11.4 0.8 1.9 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain EF-hand_2 PF09068.11 ORF5775 - 0.005 17.0 1.1 0.006 16.7 1.1 1.2 1 0 0 1 1 1 1 EF hand AAA_24 PF13479.6 ORF5775 - 0.015 15.0 0.2 0.017 14.8 0.2 1.1 1 0 0 1 1 1 0 AAA domain S36_mt PF10937.8 ORF56837 - 0.028 16.0 0.1 0.16 13.6 0.1 2.1 1 1 0 1 1 1 0 Ribosomal protein S36, mitochondrial DUF4559 PF15112.6 ORF56837 - 0.06 13.0 0.0 0.069 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) TPR_12 PF13424.6 ORF56497 - 0.00027 21.2 0.0 0.002 18.4 0.1 1.9 1 1 1 2 2 2 2 Tetratricopeptide repeat DUF4718 PF15842.5 ORF55795 - 0.054 13.3 0.0 0.06 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) DUF5067 PF16729.5 ORF55485 - 0.19 11.7 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5067) Rbsn PF11464.8 ORF55110 - 0.041 13.6 0.1 0.041 13.6 0.1 3.1 3 1 1 4 4 4 0 Rabenosyn Rab binding domain PHD PF00628.29 ORF54265 - 0.035 14.0 1.0 0.053 13.4 1.0 1.2 1 0 0 1 1 1 0 PHD-finger Ank_2 PF12796.7 ORF53969 - 1.1e-09 38.7 3.7 1.3e-07 32.0 0.2 1.8 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF53969 - 1.9e-08 34.4 0.4 3.4e-08 33.6 0.4 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF53969 - 1.9e-06 27.8 0.1 0.012 16.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF53969 - 5e-06 27.0 0.1 0.052 14.1 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF53969 - 0.00052 20.3 0.1 0.0071 16.7 0.1 2.3 2 0 0 2 2 2 1 Ankyrin repeat RabGAP-TBC PF00566.18 ORF53643 - 1.1e-26 93.9 1.6 1.1e-26 93.8 1.6 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain ApeA_NTD1 PF18862.1 ORF53420 - 0.028 14.0 2.3 0.034 13.7 2.3 1.1 1 0 0 1 1 1 0 ApeA N-terminal domain 1 DUF2142 PF09913.9 ORF53420 - 0.39 9.5 0.4 0.44 9.4 0.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) MlaC PF05494.12 ORF53392 - 0.032 14.0 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 MlaC protein Corona_RPol_N PF06478.13 ORF53392 - 0.085 11.9 0.5 0.11 11.5 0.5 1.1 1 0 0 1 1 1 0 Coronavirus RPol N-terminus DUF3341 PF11821.8 ORF53056 - 0.042 13.5 0.1 0.05 13.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) SAA PF00277.18 ORF52474 - 0.053 14.0 0.0 0.062 13.8 0.0 1.1 1 0 0 1 1 1 0 Serum amyloid A protein EIIBC-GUT_N PF03612.14 ORF51864 - 0.088 12.5 2.9 0.1 12.3 2.9 1.2 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Glyco_hydro_4C PF11975.8 ORF51864 - 0.095 12.8 1.7 0.16 12.0 1.7 1.3 1 1 0 1 1 1 0 Family 4 glycosyl hydrolase C-terminal domain Edc3_linker PF16598.5 ORF51542 - 0.14 12.9 1.4 0.51 11.0 0.1 2.0 1 1 1 2 2 2 0 Linker region of enhancer of mRNA-decapping protein 3 DAO PF01266.24 ORF51234 - 0.00046 19.9 0.0 0.00058 19.5 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pkinase PF00069.25 ORF49815 - 3.7e-29 101.9 0.0 3.9e-29 101.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49815 - 2.5e-16 59.7 0.0 2.8e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF49815 - 0.0008 18.8 0.0 0.001 18.4 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF49815 - 0.037 13.0 0.0 0.048 12.6 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF49815 - 0.039 12.7 0.0 0.041 12.6 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase zf-RING_2 PF13639.6 ORF48556 - 3.7e-10 40.0 11.7 3.7e-10 40.0 11.7 2.1 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF48556 - 2.9e-08 33.3 15.1 7.2e-08 32.0 15.1 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF48556 - 0.0001 22.1 10.6 0.0003 20.5 10.6 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF48556 - 0.00012 21.7 9.6 0.00012 21.7 9.6 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 ORF48556 - 0.0003 20.6 13.1 0.0003 20.6 13.1 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF48556 - 0.00032 20.9 13.0 0.00032 20.9 13.0 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF48556 - 0.00044 20.2 11.7 0.001 19.1 11.7 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF48556 - 0.011 15.6 11.9 0.011 15.6 11.9 2.1 2 0 0 2 2 2 0 zinc-RING finger domain FANCL_C PF11793.8 ORF48556 - 0.012 15.7 9.7 0.012 15.7 9.7 2.1 2 0 0 2 2 2 0 FANCL C-terminal domain zf-ANAPC11 PF12861.7 ORF48556 - 0.35 11.0 13.8 0.027 14.5 7.6 2.2 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger NKWYS PF10364.9 ORF47597 - 0.029 14.5 0.9 0.029 14.5 0.9 2.1 1 1 1 2 2 2 0 Putative capsular polysaccharide synthesis protein LuxC PF05893.14 ORF47597 - 0.11 11.6 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) Ribosomal_L17 PF01196.19 ORF47434 - 0.03 15.2 0.4 0.035 15.0 0.4 1.3 1 1 0 1 1 1 0 Ribosomal protein L17 GSHPx PF00255.19 ORF46984 - 5.7e-24 83.8 0.8 8.1e-24 83.3 0.8 1.2 1 0 0 1 1 1 1 Glutathione peroxidase DUF308 PF03729.13 ORF46779 - 0.17 12.2 0.0 0.28 11.6 0.0 1.2 1 0 0 1 1 1 0 Short repeat of unknown function (DUF308) Pkinase PF00069.25 ORF46638 - 2.1e-28 99.4 0.1 2.2e-28 99.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46638 - 7.4e-13 48.4 0.0 8.4e-13 48.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF46638 - 0.0072 15.3 0.0 0.0086 15.0 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF46638 - 0.019 14.3 0.1 0.025 13.9 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF46638 - 0.053 12.6 0.0 0.068 12.2 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Kinase-like PF14531.6 ORF46638 - 0.085 12.2 0.0 0.09 12.1 0.0 1.1 1 0 0 1 1 1 0 Kinase-like AbrB-like PF14250.6 ORF45340 - 0.16 12.1 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 AbrB-like transcriptional regulator ANAPC4_WD40 PF12894.7 ORF44378 - 9.2e-09 35.5 0.0 3.4e-05 24.0 0.0 2.6 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF44378 - 6.2e-08 33.2 0.0 0.00013 22.7 0.0 2.4 2 0 0 2 2 2 2 WD domain, G-beta repeat WD40_like PF17005.5 ORF44378 - 0.0041 16.5 0.2 0.0061 15.9 0.2 1.3 1 0 0 1 1 1 1 WD40-like domain Tctex-1 PF03645.13 ORF44378 - 0.14 12.4 0.1 1.1 9.5 0.0 1.9 1 1 0 2 2 2 0 Tctex-1 family TPP_enzyme_C PF02775.21 ORF43904 - 1e-09 38.3 0.0 1.3e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MTH865 PF07747.11 ORF43904 - 0.17 11.7 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 MTH865-like family Herpes_UL55 PF04537.12 ORF42626 - 0.06 13.4 0.2 0.065 13.2 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL55 protein PP-binding PF00550.25 ORF41983 - 0.0016 18.7 0.0 0.0021 18.4 0.0 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site Rad60-SLD PF11976.8 ORF41983 - 0.073 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like BRCA2 PF00634.18 ORF41903 - 1.5 8.5 3.9 0.46 10.2 0.8 1.9 2 1 0 2 2 2 0 BRCA2 repeat DUF5300 PF17224.3 ORF41754 - 0.053 13.8 1.2 0.074 13.3 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5300) Methyltransf_4 PF02390.17 ORF41754 - 1.1 8.7 6.5 0.081 12.4 1.1 1.8 1 1 0 2 2 2 0 Putative methyltransferase HD PF01966.22 ORF41513 - 0.16 12.2 0.2 0.21 11.8 0.2 1.4 1 1 0 1 1 1 0 HD domain DUF2076 PF09849.9 ORF40843 - 0.0035 17.4 6.7 0.0041 17.2 6.7 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) LMBR1 PF04791.16 ORF40606 - 2.7 6.8 4.0 2.5 6.9 4.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein CRIC_ras_sig PF10534.9 ORF38546 - 0.09 13.0 0.0 0.12 12.6 0.0 1.5 1 1 0 1 1 1 0 Connector enhancer of kinase suppressor of ras Ig_C17orf99 PF17736.1 ORF38467 - 0.0014 18.6 0.4 0.0019 18.2 0.4 1.2 1 0 0 1 1 1 1 C17orf99 Ig domain He_PIG PF05345.12 ORF38467 - 0.041 14.1 2.1 0.076 13.2 2.1 1.5 1 0 0 1 1 1 0 Putative Ig domain BACON PF13004.7 ORF38467 - 0.082 12.9 2.2 0.53 10.3 2.2 2.2 1 1 0 1 1 1 0 Putative binding domain, N-terminal DUF3343 PF11823.8 ORF37843 - 0.028 13.9 0.1 0.047 13.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) DUF5418 PF17439.2 ORF37800 - 0.071 13.2 0.6 0.087 12.9 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5418) MIF PF01187.18 ORF37184 - 0.0012 19.1 0.3 0.0015 18.8 0.3 1.2 1 0 0 1 1 1 1 Macrophage migration inhibitory factor (MIF) Tautomerase PF01361.21 ORF37184 - 0.0013 18.6 0.2 0.0025 17.7 0.2 1.5 1 1 0 1 1 1 1 Tautomerase enzyme VP4_helical PF17478.2 ORF37184 - 0.1 12.0 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP4 helical domain MORN PF02493.20 ORF37094 - 3.8e-11 42.2 5.4 0.00012 21.8 0.0 4.0 5 0 0 5 5 5 2 MORN repeat Ribosomal_S17e PF00833.18 ORF36270 - 0.027 14.4 0.1 0.06 13.3 0.1 1.6 1 1 1 2 2 2 0 Ribosomal S17 DUF3916 PF13079.6 ORF36270 - 0.055 13.4 0.7 0.068 13.0 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) Integrase_H2C2 PF17921.1 ORF35829 - 0.082 13.0 1.4 0.17 12.0 1.4 1.5 1 0 0 1 1 1 0 Integrase zinc binding domain DUF4708 PF15813.5 ORF35001 - 0.066 12.4 0.2 0.18 10.9 0.1 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4708) Ldt_C PF17969.1 ORF33999 - 2.4e-25 89.0 0.4 3.1e-25 88.7 0.4 1.1 1 0 0 1 1 1 1 L,D-transpeptidase C-terminal domain YkuD PF03734.14 ORF33999 - 1.5e-06 28.7 0.0 2.3e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain ShK PF01549.24 ORF33308 - 0.48 11.0 11.5 1 10.0 4.3 2.9 2 1 0 2 2 2 0 ShK domain-like TPT PF03151.16 ORF32453 - 2.7e-26 92.6 2.4 3e-26 92.5 2.4 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family UAA PF08449.11 ORF32453 - 0.0057 15.9 0.9 0.0058 15.9 0.9 1.1 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF32453 - 0.0072 16.5 6.4 0.0077 16.4 6.4 1.1 1 0 0 1 1 1 1 EamA-like transporter family DUF5423 PF17461.2 ORF31700 - 0.034 13.0 1.7 0.035 13.0 1.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks214.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks214.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks214.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks214.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RCC1_2 PF13540.6 ORF31511 - 2.3e-11 43.2 0.9 5.5e-06 26.0 0.0 2.5 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF31511 - 1.1e-07 32.4 0.0 6.2e-07 29.9 0.0 2.0 2 1 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat DDE_Tnp_1_6 PF13751.6 ORF31272 - 0.028 14.6 4.3 0.034 14.4 4.1 1.4 1 1 0 1 1 1 0 Transposase DDE domain DUF3332 PF11810.8 ORF31272 - 0.3 10.7 4.1 0.38 10.4 4.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DUF1127 PF06568.11 ORF31125 - 0.2 11.4 4.3 0.46 10.2 0.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1127) WCCH PF03716.14 ORF30440 - 0.093 12.4 1.6 0.37 10.5 0.2 2.3 2 0 0 2 2 2 0 WCCH motif GRDP-like PF07173.12 ORF29693 - 0.0097 16.6 9.3 0.016 15.9 0.6 2.1 1 1 1 2 2 2 2 Glycine-rich domain-containing protein-like DUF4187 PF13821.6 ORF29693 - 0.057 13.2 0.7 0.099 12.4 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) Lactamase_B PF00753.27 ORF28958 - 0.024 14.6 0.9 0.026 14.5 0.9 1.2 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily DUF2457 PF10446.9 ORF28640 - 4.1 6.4 5.0 4.4 6.3 5.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Ras PF00071.22 ORF28250 - 1.5e-27 96.2 0.1 1.6e-27 96.1 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF28250 - 2.6e-20 72.8 0.0 2.9e-20 72.7 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF28250 - 6.1e-07 29.1 0.0 7.7e-07 28.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF28250 - 0.00043 20.4 0.0 0.00059 19.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase cobW PF02492.19 ORF28250 - 0.0064 16.1 0.0 0.033 13.8 0.0 1.9 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF28250 - 0.084 13.1 0.0 0.11 12.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF28250 - 0.089 13.2 0.0 0.1 12.9 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain DUF2070 PF09843.9 ORF27360 - 5.2 5.2 6.6 6.5 4.9 6.6 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) Ras PF00071.22 ORF26880 - 1.5e-27 96.2 0.1 1.6e-27 96.1 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF26880 - 2.6e-20 72.8 0.0 2.9e-20 72.7 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF26880 - 6.1e-07 29.1 0.0 7.7e-07 28.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF26880 - 0.00043 20.4 0.0 0.00059 19.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase cobW PF02492.19 ORF26880 - 0.0064 16.1 0.0 0.033 13.8 0.0 1.9 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF26880 - 0.084 13.1 0.0 0.11 12.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF26880 - 0.089 13.2 0.0 0.1 12.9 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain ABC_membrane PF00664.23 ORF26397 - 1.2e-11 44.8 0.2 1.3e-11 44.7 0.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region SIR2 PF02146.17 ORF26397 - 0.077 12.9 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Sir2 family TT_ORF1 PF02956.14 ORF25942 - 0.18 10.4 6.7 0.2 10.3 6.7 1.0 1 0 0 1 1 1 0 TT viral orf 1 Peptidase_S66C PF17676.1 ORF25437 - 0.19 12.3 0.0 0.22 12.0 0.0 1.2 1 0 0 1 1 1 0 LD-carboxypeptidase C-terminal domain YjbE PF11106.8 ORF24523 - 0.081 13.1 3.6 0.11 12.7 3.6 1.3 1 0 0 1 1 1 0 Exopolysaccharide production protein YjbE HAP1_N PF04849.13 ORF2448 - 2.1e-05 23.9 0.6 2.2e-05 23.8 0.6 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region APP_N PF02177.16 ORF2448 - 0.0048 17.2 0.7 0.0061 16.9 0.7 1.2 1 0 0 1 1 1 1 Amyloid A4 N-terminal heparin-binding Cortex-I_coil PF09304.10 ORF2448 - 0.0061 16.8 1.2 0.0077 16.4 1.2 1.2 1 0 0 1 1 1 1 Cortexillin I, coiled coil CENP-H PF05837.12 ORF2448 - 0.0083 16.5 2.7 0.012 16.0 2.7 1.2 1 0 0 1 1 1 1 Centromere protein H (CENP-H) FlaC_arch PF05377.11 ORF2448 - 0.0096 16.3 1.0 0.019 15.4 0.1 2.0 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) Nsp1_C PF05064.13 ORF2448 - 0.014 15.2 1.4 0.018 14.8 1.4 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region bZIP_1 PF00170.21 ORF2448 - 0.016 15.3 5.5 0.028 14.5 5.5 1.5 1 0 0 1 1 1 0 bZIP transcription factor YvbH_ext PF11724.8 ORF2448 - 0.037 14.4 0.7 0.21 11.9 0.6 1.9 2 0 0 2 2 2 0 YvbH-like oligomerisation region Prominin PF05478.11 ORF2448 - 0.066 11.2 1.8 0.076 11.0 1.8 1.0 1 0 0 1 1 1 0 Prominin PRANC PF09372.10 ORF2448 - 0.14 12.5 5.1 0.36 11.2 4.4 1.8 1 1 1 2 2 2 0 PRANC domain DUF2951 PF11166.8 ORF2448 - 0.34 11.2 4.5 0.28 11.4 1.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) TMPIT PF07851.13 ORF2448 - 0.44 9.8 2.9 0.44 9.7 2.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein DivIC PF04977.15 ORF2448 - 0.9 9.4 3.9 3.5 7.5 3.8 1.9 1 1 0 1 1 1 0 Septum formation initiator Fib_alpha PF08702.10 ORF2448 - 0.95 9.6 7.9 6.8 6.9 8.3 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Turandot PF07240.11 ORF2448 - 1.3 9.0 4.3 2.9 7.9 0.4 2.1 1 1 1 2 2 2 0 Stress-inducible humoral factor Turandot GDA1_CD39 PF01150.17 ORF23942 - 5.3e-06 25.4 0.0 6e-06 25.2 0.0 1.0 1 0 0 1 1 1 1 GDA1/CD39 (nucleoside phosphatase) family SEEEED PF14797.6 ORF23729 - 1.4 9.1 7.7 0.97 9.6 6.5 1.5 1 1 0 1 1 1 0 Serine-rich region of AP3B1, clathrin-adaptor complex SURF2 PF05477.11 ORF23729 - 2.3 7.9 18.3 8.5 6.0 18.3 1.8 1 1 0 1 1 1 0 Surfeit locus protein 2 (SURF2) TraP PF07296.11 ORF23002 - 0.023 13.9 0.1 0.031 13.5 0.1 1.4 1 1 0 1 1 1 0 TraP protein DUF4081 PF13312.6 ORF23002 - 0.029 14.6 0.1 0.04 14.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4081) RMI1_C PF16099.5 ORF23002 - 0.038 13.8 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold YniB PF14002.6 ORF23002 - 0.044 13.6 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 YniB-like protein HMG_box PF00505.19 ORF22402 - 7.5e-05 23.1 0.0 0.00011 22.5 0.0 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF22402 - 0.0024 18.4 0.1 0.0042 17.6 0.0 1.4 1 1 0 1 1 1 1 HMG-box domain Herpes_capsid PF06112.11 ORF22372 - 1.8 8.6 10.2 2.2 8.3 10.2 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Ank_2 PF12796.7 ORF21814 - 0.13 12.9 0.0 0.18 12.4 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) DUF4768 PF15989.5 ORF19864 - 0.043 13.7 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) TetR_C_3 PF08362.11 ORF19864 - 0.17 11.8 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 YcdC-like protein, C-terminal region LZ_Tnp_IS66 PF13007.7 ORF19854 - 2.8 8.8 19.7 3.2 8.6 4.9 2.3 1 1 1 2 2 2 0 Transposase C of IS166 homeodomain BACON PF13004.7 ORF1897 - 0.033 14.2 1.3 0.076 13.0 1.3 1.7 1 1 0 1 1 1 0 Putative binding domain, N-terminal Thia_YuaJ PF09515.10 ORF1897 - 0.15 12.0 0.1 0.22 11.6 0.1 1.2 1 0 0 1 1 1 0 Thiamine transporter protein (Thia_YuaJ) Fucose_iso_N2 PF07882.12 ORF18323 - 0.17 11.4 3.4 0.18 11.4 3.4 1.2 1 0 0 1 1 1 0 L-fucose isomerase, second N-terminal domain Spore_III_AF PF09581.10 ORF18323 - 0.69 9.9 10.3 0.78 9.7 10.3 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) LMBR1 PF04791.16 ORF18323 - 0.74 8.7 7.5 0.76 8.6 7.5 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF1168 PF06658.12 ORF18323 - 2.6 7.9 19.9 3.3 7.5 19.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) FoP_duplication PF13865.6 ORF16096 - 7.7 7.2 9.1 12 6.6 9.1 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 MlaC PF05494.12 ORF15304 - 0.032 14.0 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 MlaC protein Corona_RPol_N PF06478.13 ORF15304 - 0.085 11.9 0.5 0.11 11.5 0.5 1.1 1 0 0 1 1 1 0 Coronavirus RPol N-terminus Pkinase PF00069.25 ORF15128 - 2.1e-28 99.4 0.1 2.2e-28 99.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF15128 - 7.4e-13 48.4 0.0 8.4e-13 48.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF15128 - 0.0072 15.3 0.0 0.0086 15.0 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF15128 - 0.019 14.3 0.1 0.025 13.9 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF15128 - 0.053 12.6 0.0 0.068 12.2 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Kinase-like PF14531.6 ORF15128 - 0.085 12.2 0.0 0.09 12.1 0.0 1.1 1 0 0 1 1 1 0 Kinase-like WCCH PF03716.14 ORF15021 - 0.093 12.4 1.6 0.37 10.5 0.2 2.3 2 0 0 2 2 2 0 WCCH motif Cas_CXXC_CXXC PF09706.10 ORF14614 - 0.072 13.3 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) SAT PF16073.5 ORF13119 - 0.033 13.9 0.1 0.039 13.7 0.1 1.1 1 0 0 1 1 1 0 Starter unit:ACP transacylase in aflatoxin biosynthesis Cas6b_N PF17955.1 ORF12768 - 0.021 14.9 0.1 0.028 14.5 0.1 1.2 1 0 0 1 1 1 0 Cas6b N-terminal domain DUF3429 PF11911.8 ORF11986 - 0.00052 20.3 4.9 0.00059 20.1 4.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3429) Arteri_Gl PF00951.18 ORF1153 - 0.0022 17.8 0.2 0.0024 17.7 0.2 1.1 1 0 0 1 1 1 1 Arterivirus GL envelope glycoprotein Homeobox_KN PF05920.11 ORF11410 - 7.7e-18 64.1 0.4 1.7e-17 63.0 0.4 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF11410 - 1.4e-10 40.9 0.9 2.9e-10 39.8 0.9 1.7 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF11410 - 0.0027 17.5 0.2 0.0068 16.2 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT BAR_3 PF16746.5 ORF112240 - 0.0059 16.3 4.6 0.0064 16.2 4.6 1.1 1 0 0 1 1 1 1 BAR domain of APPL family EB1 PF03271.17 ORF112240 - 0.0071 16.6 0.2 0.0071 16.6 0.2 2.2 2 0 0 2 2 2 1 EB1-like C-terminal motif TRPM_tetra PF16519.5 ORF112240 - 0.016 15.3 4.2 0.037 14.1 4.2 1.6 1 0 0 1 1 1 0 Tetramerisation domain of TRPM DUF4404 PF14357.6 ORF112240 - 0.03 15.0 6.7 0.038 14.6 6.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) SCF PF02404.15 ORF112240 - 0.061 12.7 1.1 0.06 12.7 1.1 1.1 1 0 0 1 1 1 0 Stem cell factor DUF1664 PF07889.12 ORF112240 - 0.22 11.6 4.7 0.28 11.2 4.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Exonuc_VII_L PF02601.15 ORF112240 - 0.81 9.2 4.7 0.84 9.1 4.7 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Tweety PF04906.13 ORF112240 - 1.1 7.9 4.1 1.2 7.7 4.1 1.0 1 0 0 1 1 1 0 Tweety CENP-T_C PF15511.6 ORF111056 - 2.1e-07 31.0 0.0 2.6e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF111056 - 3.4e-05 24.0 0.0 4.5e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF111056 - 0.0002 21.5 0.1 0.00035 20.7 0.0 1.5 1 1 0 1 1 1 1 TATA box binding protein associated factor (TAF) Histone PF00125.24 ORF111056 - 0.0034 17.8 0.2 0.0041 17.5 0.2 1.3 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 ORF111056 - 0.0067 16.8 0.0 0.0094 16.3 0.0 1.4 1 1 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 ORF111056 - 0.018 15.1 0.0 0.022 14.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF111056 - 0.039 14.5 0.0 0.056 13.9 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 ORF111056 - 0.18 11.8 0.0 0.24 11.5 0.0 1.2 1 0 0 1 1 1 0 Bromodomain associated Actin PF00022.19 ORF109823 - 0.00025 19.8 0.0 0.00025 19.8 0.0 1.1 1 0 0 1 1 1 1 Actin SecG PF03840.14 ORF108692 - 2.3e-21 75.6 12.0 2.8e-21 75.4 12.0 1.1 1 0 0 1 1 1 1 Preprotein translocase SecG subunit DUF4870 PF09685.10 ORF108692 - 0.065 13.3 0.4 0.11 12.6 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4870) PulG PF11773.8 ORF108692 - 0.081 12.8 0.4 0.15 11.9 0.0 1.6 2 0 0 2 2 2 0 Type II secretory pathway pseudopilin Pam16 PF03656.13 ORF108278 - 2.1e-08 34.2 0.9 3.8e-08 33.4 0.9 1.4 1 1 0 1 1 1 1 Pam16 CGGC PF08821.11 ORF107189 - 0.0032 17.6 0.1 0.004 17.3 0.1 1.1 1 0 0 1 1 1 1 CGGC domain CusF_Ec PF11604.8 ORF106992 - 1.1e-21 76.6 0.2 1.4e-21 76.2 0.2 1.2 1 0 0 1 1 1 1 Copper binding periplasmic protein CusF OapA PF04225.12 ORF106992 - 0.09 12.9 0.1 0.29 11.3 0.0 1.7 2 0 0 2 2 2 0 Opacity-associated protein A LysM-like domain C2 PF00168.30 ORF106902 - 1.7e-09 37.9 0.0 2e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 C2 domain LysR_substrate PF03466.20 ORF106881 - 3.2e-12 46.3 0.0 3.6e-12 46.1 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain DUF5554 PF17709.1 ORF106881 - 0.13 12.4 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5554) AbfS_sensor PF18225.1 ORF106713 - 0.048 13.6 0.0 0.085 12.8 0.0 1.4 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain SH3_4 PF06347.13 ORF104203 - 0.089 12.6 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Bacterial SH3 domain DUF1842 PF08896.10 ORF104142 - 0.086 13.1 0.1 0.13 12.5 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1842) Pollen_allerg_1 PF01357.21 ORF104142 - 0.093 12.8 3.5 2.3 8.3 0.8 2.8 1 1 1 2 2 2 0 Pollen allergen TRADD_N PF09034.10 ORF103839 - 0.0038 17.3 0.0 0.0049 16.9 0.0 1.2 1 0 0 1 1 1 1 TRADD, N-terminal domain RSN1_TM PF13967.6 ORF103835 - 7.3e-08 32.3 0.0 8.8e-08 32.1 0.0 1.1 1 0 0 1 1 1 1 Late exocytosis, associated with Golgi transport Complex1_LYR_2 PF13233.6 ORF103562 - 1.1e-13 51.8 1.7 1.4e-13 51.4 1.7 1.2 1 1 0 1 1 1 1 Complex1_LYR-like Complex1_LYR PF05347.15 ORF103562 - 1.8e-07 31.1 0.1 3.1e-07 30.3 0.1 1.4 1 0 0 1 1 1 1 Complex 1 protein (LYR family) DUF3945 PF13101.6 ORF103562 - 0.0048 16.6 0.2 0.0071 16.0 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3945) DHC PF09626.10 ORF102926 - 0.018 15.9 0.3 0.023 15.6 0.3 1.1 1 0 0 1 1 1 0 Dihaem cytochrome c MMU163 PF17119.5 ORF102926 - 0.032 13.4 1.7 0.04 13.1 1.7 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis SMODS PF18144.1 ORF102926 - 0.095 12.9 3.3 0.17 12.1 3.3 1.4 1 1 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain Histone PF00125.24 ORF102103 - 3.4e-35 121.3 0.1 3.7e-35 121.2 0.1 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 DUF4840 PF16128.5 ORF102103 - 0.12 12.4 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4840) tRNA_bind PF01588.20 ORF100551 - 1.5e-31 108.3 0.5 1.7e-31 108.2 0.5 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain RVT_1 PF00078.27 NODE_54042_length_325_cov_1.110345_g46112_i0forward_frame_1 - 0.0089 15.6 0.0 0.01 15.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4466 PF14725.6 NODE_54041_length_325_cov_1.193103_g46111_i0forward_frame_1 - 0.092 12.2 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4466) UL41A PF17591.2 NODE_54038_length_325_cov_1.417241_g46108_i0reverse_frame_1 - 0.23 11.6 3.3 0.22 11.7 1.4 1.8 2 0 0 2 2 2 0 Herpesvirus UL41A DASH_Dad3 PF08656.10 NODE_54038_length_325_cov_1.417241_g46108_i0forward_frame_1 - 0.36 10.9 3.6 11 6.2 3.6 2.5 1 1 0 1 1 1 0 DASH complex subunit Dad3 Med4 PF10018.9 NODE_54038_length_325_cov_1.417241_g46108_i0forward_frame_1 - 0.46 10.1 3.2 0.57 9.8 3.2 1.1 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 rpo132 PF12415.8 NODE_54031_length_325_cov_1.803448_g46101_i0reverse_frame_1 - 0.15 11.4 1.7 0.41 10.0 1.0 2.0 2 0 0 2 2 2 0 Poxvirus DNA dependent RNA polymerase Col_cuticle_N PF01484.17 NODE_54031_length_325_cov_1.803448_g46101_i0reverse_frame_1 - 0.44 10.6 0.2 0.44 10.6 0.2 2.5 1 1 1 2 2 2 0 Nematode cuticle collagen N-terminal domain eIF2A PF08662.11 NODE_54026_length_325_cov_1.986207_g46096_i0forward_frame_1 - 0.008 16.1 0.1 0.016 15.1 0.1 1.5 1 1 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A ANAPC4_WD40 PF12894.7 NODE_54026_length_325_cov_1.986207_g46096_i0forward_frame_1 - 0.014 15.7 0.1 0.074 13.4 0.1 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain UvrB_inter PF17757.1 NODE_54026_length_325_cov_1.986207_g46096_i0forward_frame_1 - 0.1 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 UvrB interaction domain WD40 PF00400.32 NODE_54026_length_325_cov_1.986207_g46096_i0forward_frame_1 - 0.17 12.8 1.1 0.88 10.6 0.2 2.4 3 0 0 3 3 3 0 WD domain, G-beta repeat GGDEF PF00990.21 NODE_54020_length_325_cov_2.262069_g46090_i0forward_frame_1 - 0.0021 17.8 0.0 0.0029 17.4 0.0 1.2 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain BAH PF01426.18 NODE_54015_length_325_cov_2.568966_g46085_i0forward_frame_1 - 2.8e-09 36.9 0.0 3.6e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 BAH domain DUF1967 PF09269.11 NODE_54015_length_325_cov_2.568966_g46085_i0forward_frame_1 - 0.022 14.7 0.0 0.045 13.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) DUF3961 PF13106.6 NODE_54013_length_325_cov_2.651724_g46083_i0reverse_frame_1 - 0.28 10.9 1.2 16 5.2 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3961) EAL PF00563.20 NODE_54011_length_325_cov_2.727586_g46081_i0forward_frame_1 - 3e-18 66.2 0.0 3.5e-18 66.0 0.0 1.0 1 0 0 1 1 1 1 EAL domain PH_16 PF17838.1 NODE_54011_length_325_cov_2.727586_g46081_i0forward_frame_1 - 0.13 12.1 0.0 9.6 6.1 0.0 2.0 1 1 1 2 2 2 0 PH domain CheY-binding PF09078.11 NODE_54006_length_325_cov_3.003448_g46076_i0reverse_frame_1 - 1.4e-19 69.9 0.8 2e-19 69.4 0.8 1.2 1 0 0 1 1 1 1 CheY binding rve PF00665.26 NODE_54001_length_325_cov_4.896552_g46071_i0forward_frame_1 - 0.015 15.5 0.0 0.018 15.2 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain Mt_ATP_synt PF15704.5 NODE_54001_length_325_cov_4.896552_g46071_i0forward_frame_1 - 0.11 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase subunit DUF1883 PF08980.10 NODE_53996_length_325_cov_10.475862_g46066_i0reverse_frame_1 - 0.023 14.6 0.1 1.2 9.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1883) CSRNP_N PF16019.5 NODE_53996_length_325_cov_10.475862_g46066_i0reverse_frame_1 - 0.15 11.9 0.0 8 6.3 0.0 2.0 1 1 1 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus DUF2070 PF09843.9 NODE_53995_length_325_cov_44.324138_g46065_i0forward_frame_1 - 2.5 6.3 11.5 2.7 6.2 11.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Pep1_7 PF17232.2 NODE_53991_length_325_cov_49.027586_g46061_i0forward_frame_1 - 0.066 13.7 0.1 0.11 13.0 0.1 1.3 1 0 0 1 1 1 0 Elicitor peptide 1-7 Herpes_UL33 PF03581.13 NODE_53991_length_325_cov_49.027586_g46061_i0forward_frame_1 - 0.1 13.0 0.2 0.3 11.5 0.2 1.8 1 1 0 1 1 1 0 Herpesvirus UL33-like protein U-box PF04564.15 NODE_53980_length_325_cov_65.806897_g46050_i0reverse_frame_1 - 2.6e-05 24.3 0.1 3.5e-05 23.9 0.1 1.3 1 1 0 1 1 1 1 U-box domain Blt1 PF12754.7 NODE_53979_length_325_cov_66.303448_g46049_i0reverse_frame_1 - 0.2 12.0 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 Blt1 N-terminal domain GSIII_N PF12437.8 NODE_53969_length_325_cov_87.127586_g46039_i0reverse_frame_1 - 0.01 15.5 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 Glutamine synthetase type III N terminal DUF3443 PF11925.8 NODE_53969_length_325_cov_87.127586_g46039_i0reverse_frame_1 - 0.047 12.5 0.0 0.055 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3443) RCC1_2 PF13540.6 NODE_53963_length_325_cov_124.600000_g46033_i0reverse_frame_1 - 2e-05 24.2 1.3 0.15 11.9 0.4 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF4359 PF14271.6 NODE_53960_length_325_cov_150.282759_g46030_i0reverse_frame_1 - 0.029 15.1 2.3 0.073 13.8 2.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4359) Bac_export_2 PF01312.19 NODE_53960_length_325_cov_150.282759_g46030_i0forward_frame_1 - 0.55 9.4 5.7 0.64 9.2 5.7 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family DUF2070 PF09843.9 NODE_53960_length_325_cov_150.282759_g46030_i0forward_frame_1 - 4.9 5.3 17.3 5.7 5.1 17.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) HTH_31 PF13560.6 NODE_53957_length_325_cov_198.100000_g46027_i0reverse_frame_1 - 0.0042 17.4 1.1 0.0063 16.8 1.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 NODE_53957_length_325_cov_198.100000_g46027_i0reverse_frame_1 - 0.017 14.9 0.1 0.027 14.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3123 PF11321.8 NODE_53956_length_325_cov_268.275862_g46026_i0reverse_frame_1 - 0.11 13.2 0.2 0.14 12.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3123) UL97 PF06734.12 NODE_53945_length_325_cov_2313.813793_g46016_i0reverse_frame_1 - 0.078 12.9 0.1 0.091 12.6 0.1 1.1 1 0 0 1 1 1 0 UL97 IPK PF03770.16 NODE_53933_length_326_cov_1.738832_g46004_i0forward_frame_1 - 0.039 13.8 0.8 0.047 13.5 0.8 1.2 1 0 0 1 1 1 0 Inositol polyphosphate kinase Trypan_PARP PF05887.11 NODE_53930_length_326_cov_1.828179_g46001_i0reverse_frame_1 - 0.07 13.1 25.3 14 5.7 25.3 2.1 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Serglycin PF04360.12 NODE_53930_length_326_cov_1.828179_g46001_i0forward_frame_1 - 2.9 7.8 8.9 0.37 10.7 3.4 2.1 2 0 0 2 2 2 0 Serglycin Chordopox_G3 PF06129.12 NODE_53929_length_326_cov_1.835052_g46000_i0reverse_frame_1 - 0.0098 16.6 0.4 0.016 15.9 0.4 1.3 1 0 0 1 1 1 1 Chordopoxvirus G3 protein Autoind_bind PF03472.15 NODE_53925_length_326_cov_2.243986_g45996_i0forward_frame_1 - 0.025 14.0 0.1 0.036 13.5 0.1 1.3 1 0 0 1 1 1 0 Autoinducer binding domain DUF2794 PF10984.8 NODE_53925_length_326_cov_2.243986_g45996_i0forward_frame_1 - 0.12 12.5 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2794) AAT PF03417.16 NODE_53919_length_326_cov_2.484536_g45990_i0forward_frame_1 - 0.12 12.1 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Barwin PF00967.17 NODE_53917_length_326_cov_2.518900_g45988_i0forward_frame_1 - 0.013 15.3 0.4 0.019 14.8 0.1 1.3 1 1 0 1 1 1 0 Barwin family HECA PF15353.6 NODE_53910_length_326_cov_2.711340_g45981_i0forward_frame_1 - 0.17 12.2 0.0 0.24 11.7 0.0 1.3 1 1 0 1 1 1 0 Headcase protein family homologue WD40 PF00400.32 NODE_53909_length_326_cov_2.914089_g45980_i0reverse_frame_1 - 0.015 16.1 0.0 0.031 15.1 0.0 1.5 1 0 0 1 1 1 0 WD domain, G-beta repeat DUF5617 PF18493.1 NODE_53896_length_326_cov_58.140893_g45967_i0reverse_frame_1 - 0.034 14.2 0.3 0.061 13.4 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) Nexin_C PF08628.12 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_1 - 0.0038 17.8 2.4 0.0057 17.2 2.4 1.3 1 0 0 1 1 1 1 Sorting nexin C terminal NNMT_PNMT_TEMT PF01234.17 NODE_53891_length_326_cov_64.756014_g45962_i0forward_frame_1 - 0.12 11.6 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family Tachystatin_A PF11406.8 NODE_53878_length_326_cov_81.577320_g45949_i0forward_frame_1 - 0.49 10.5 3.4 0.58 10.3 0.1 2.4 3 0 0 3 3 3 0 Antimicrobial peptide tachystatin A NAD_binding_10 PF13460.6 NODE_53877_length_326_cov_84.243986_g45948_i0forward_frame_1 - 0.053 13.4 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H-binding DUF3716 PF12511.8 NODE_53876_length_326_cov_86.329897_g45947_i0forward_frame_1 - 0.084 12.9 1.0 0.13 12.4 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3716) SPDY PF03771.16 NODE_53867_length_326_cov_98.759450_g45938_i0reverse_frame_1 - 0.047 13.6 4.6 4.5 7.3 3.9 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF317) DUF5423 PF17461.2 NODE_53861_length_326_cov_126.292096_g45932_i0reverse_frame_1 - 0.15 10.9 0.4 0.18 10.6 0.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Herpes_LAMP2 PF06126.11 NODE_53861_length_326_cov_126.292096_g45932_i0reverse_frame_1 - 0.23 10.0 5.0 0.26 9.9 5.0 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 Pkinase PF00069.25 NODE_53861_length_326_cov_126.292096_g45932_i0forward_frame_1 - 8e-06 25.4 0.0 9.5e-06 25.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain RCC1_2 PF13540.6 NODE_53856_length_326_cov_145.996564_g45927_i0reverse_frame_1 - 0.00074 19.2 1.8 0.43 10.4 0.0 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat ABC_tran PF00005.27 NODE_53850_length_326_cov_273.305842_g45921_i0reverse_frame_1 - 3.4e-05 24.4 0.6 6.4e-05 23.5 0.3 1.6 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 NODE_53850_length_326_cov_273.305842_g45921_i0reverse_frame_1 - 0.0018 17.8 0.6 0.0024 17.3 0.6 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Myofilin PF15929.5 NODE_53849_length_326_cov_372.721649_g45920_i0forward_frame_1 - 0.09 13.2 0.2 0.12 12.8 0.2 1.2 1 0 0 1 1 1 0 Myofilin ABC_tran PF00005.27 NODE_53846_length_326_cov_451.419244_g45917_i0forward_frame_1 - 3.4e-05 24.4 0.6 6.4e-05 23.5 0.3 1.6 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 NODE_53846_length_326_cov_451.419244_g45917_i0forward_frame_1 - 0.0015 18.0 0.6 0.0021 17.5 0.6 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain PP2C PF00481.21 NODE_53831_length_327_cov_1.815068_g45902_i0forward_frame_1 - 2.1e-24 86.6 0.0 2.2e-24 86.5 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C MDFI PF15316.6 NODE_53826_length_327_cov_1.897260_g45897_i0forward_frame_1 - 0.1 12.7 1.5 0.12 12.5 1.5 1.1 1 0 0 1 1 1 0 MyoD family inhibitor PKHD_C PF18331.1 NODE_53825_length_327_cov_1.931507_g45896_i0forward_frame_1 - 2.1e-19 69.3 0.2 3e-19 68.8 0.2 1.2 1 0 0 1 1 1 1 PKHD-type hydroxylase C-terminal domain MOR2-PAG1_N PF14222.6 NODE_53825_length_327_cov_1.931507_g45896_i0forward_frame_1 - 0.093 11.7 0.1 0.11 11.4 0.1 1.0 1 0 0 1 1 1 0 Cell morphogenesis N-terminal SLC35F PF06027.12 NODE_53823_length_327_cov_1.993151_g45894_i0reverse_frame_1 - 0.0021 17.7 0.7 0.003 17.1 0.7 1.2 1 0 0 1 1 1 1 Solute carrier family 35 CENP-F_leu_zip PF10473.9 NODE_53821_length_327_cov_2.037671_g45892_i0reverse_frame_1 - 0.021 14.9 4.0 0.031 14.3 3.9 1.5 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 NODE_53821_length_327_cov_2.037671_g45892_i0reverse_frame_1 - 0.047 13.3 1.6 0.06 12.9 1.6 1.2 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4061 PF13270.6 NODE_53821_length_327_cov_2.037671_g45892_i0reverse_frame_1 - 0.092 13.1 0.6 0.14 12.4 0.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4061) HALZ PF02183.18 NODE_53821_length_327_cov_2.037671_g45892_i0reverse_frame_1 - 0.13 12.6 0.2 0.13 12.6 0.2 2.1 3 0 0 3 3 3 0 Homeobox associated leucine zipper V_ATPase_I PF01496.19 NODE_53820_length_327_cov_2.041096_g45891_i0reverse_frame_1 - 1.2e-32 112.9 0.5 1.3e-32 112.7 0.5 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family HTH_Tnp_ISL3 PF13542.6 NODE_53820_length_327_cov_2.041096_g45891_i0forward_frame_1 - 0.18 11.3 0.0 0.31 10.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Pentapeptide_4 PF13599.6 NODE_53819_length_327_cov_2.099315_g45890_i0reverse_frame_1 - 0.00041 20.5 1.4 0.00068 19.8 1.4 1.3 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) Pentapeptide PF00805.22 NODE_53819_length_327_cov_2.099315_g45890_i0reverse_frame_1 - 0.0044 16.6 2.7 0.62 9.8 0.4 2.3 2 0 0 2 2 2 2 Pentapeptide repeats (8 copies) Chaperone_III PF07824.12 NODE_53819_length_327_cov_2.099315_g45890_i0reverse_frame_1 - 0.09 13.0 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Type III secretion chaperone domain RabGAP-TBC PF00566.18 NODE_53813_length_327_cov_2.188356_g45884_i0forward_frame_1 - 0.0017 18.1 1.6 0.0026 17.5 1.6 1.4 1 1 0 1 1 1 1 Rab-GTPase-TBC domain Sulfotransfer_4 PF17784.1 NODE_53813_length_327_cov_2.188356_g45884_i0forward_frame_1 - 0.0094 15.8 0.2 0.012 15.5 0.2 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Inhibitor_I10 PF12559.8 NODE_53812_length_327_cov_2.256849_g45883_i0forward_frame_1 - 0.097 12.9 0.1 0.17 12.2 0.1 1.5 1 0 0 1 1 1 0 Serine endopeptidase inhibitors Casc1 PF12366.8 NODE_53806_length_327_cov_2.561644_g45877_i0forward_frame_1 - 0.039 13.5 0.2 0.046 13.2 0.2 1.2 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 RVT_1 PF00078.27 NODE_53801_length_327_cov_2.787671_g45872_i0reverse_frame_1 - 5.8e-09 35.8 0.0 6.4e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Cellulose_synt PF03552.14 NODE_53800_length_327_cov_2.859589_g45871_i0forward_frame_1 - 0.88 8.0 3.6 0.99 7.8 3.6 1.0 1 0 0 1 1 1 0 Cellulose synthase DUF2207 PF09972.9 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 0.064 12.0 4.2 0.068 11.9 4.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phlebovirus_G1 PF07243.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 0.12 10.7 9.5 0.13 10.6 9.5 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 FA_desaturase PF00487.24 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 0.51 10.1 3.2 0.58 10.0 3.2 1.1 1 0 0 1 1 1 0 Fatty acid desaturase MMPL PF03176.15 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 0.54 9.1 19.4 0.69 8.8 19.4 1.1 1 0 0 1 1 1 0 MMPL family DUF1700 PF08006.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 1.2 8.6 12.3 1.7 8.1 12.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF4191 PF13829.6 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 2.4 7.4 14.5 3.1 7.1 14.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) LMF1 PF06762.14 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 3.9 6.5 10.9 4.3 6.3 10.9 1.0 1 0 0 1 1 1 0 Lipase maturation factor DUF1129 PF06570.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 4.5 6.7 11.1 5.8 6.3 11.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) AC_N PF16214.5 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 9 5.3 14.7 9.7 5.2 14.7 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF1040 PF06288.13 NODE_53794_length_327_cov_3.448630_g45865_i0forward_frame_1 - 0.00031 21.1 0.0 0.00041 20.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) PriCT_1 PF08708.11 NODE_53792_length_327_cov_3.565068_g45863_i0forward_frame_1 - 0.039 13.7 0.2 0.063 13.0 0.2 1.3 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) DHHC PF01529.20 NODE_53788_length_327_cov_4.390411_g45859_i0forward_frame_1 - 7.4e-28 97.3 6.9 8.3e-28 97.1 6.9 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase Spt4 PF06093.13 NODE_53788_length_327_cov_4.390411_g45859_i0forward_frame_1 - 0.025 14.7 3.5 0.032 14.3 3.5 1.2 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger EF-hand_6 PF13405.6 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.00027 20.6 0.5 0.00058 19.6 0.5 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.00053 20.4 0.2 0.00078 19.9 0.2 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.0007 19.0 1.5 0.0013 18.1 1.5 1.5 1 0 0 1 1 1 1 EF hand SPARC_Ca_bdg PF10591.9 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.002 18.5 0.4 0.0026 18.1 0.4 1.2 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_5 PF13202.6 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.0044 16.4 1.7 0.008 15.6 1.7 1.4 1 0 0 1 1 1 1 EF hand PP_kinase PF02503.17 NODE_53780_length_327_cov_42.712329_g45851_i0reverse_frame_1 - 0.006 16.2 0.0 0.0076 15.9 0.0 1.1 1 0 0 1 1 1 1 Polyphosphate kinase middle domain pXO2-72 PF17443.2 NODE_53775_length_327_cov_53.273973_g45846_i0forward_frame_1 - 0.017 15.4 0.4 0.038 14.2 0.4 1.6 1 0 0 1 1 1 0 Uncharacterized protein pXO2-72 MbeD_MobD PF04899.12 NODE_53774_length_327_cov_54.523973_g45845_i0forward_frame_1 - 0.48 10.6 4.5 2.1 8.5 1.0 2.9 1 1 1 2 2 2 0 MbeD/MobD like M PF02370.16 NODE_53774_length_327_cov_54.523973_g45845_i0forward_frame_1 - 6.7 7.6 8.5 11 7.0 0.2 3.7 3 0 0 3 3 3 0 M protein repeat DUF982 PF06169.12 NODE_53765_length_327_cov_67.465753_g45836_i0forward_frame_1 - 0.071 13.2 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF982) MatE PF01554.18 NODE_53764_length_327_cov_68.280822_g45835_i0forward_frame_1 - 0.12 12.0 0.3 0.16 11.6 0.3 1.1 1 0 0 1 1 1 0 MatE partial_CstF PF15861.5 NODE_53761_length_327_cov_72.893836_g45832_i0forward_frame_1 - 0.036 13.9 0.2 0.051 13.4 0.2 1.2 1 0 0 1 1 1 0 Partial cleavage stimulation factor domain ImpE PF07024.13 NODE_53756_length_327_cov_85.455479_g45827_i0reverse_frame_1 - 0.035 14.2 0.0 0.048 13.7 0.0 1.1 1 0 0 1 1 1 0 ImpE protein PAN_1 PF00024.26 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_1 - 0.0018 18.2 3.8 1.9 8.5 2.9 2.5 1 1 1 2 2 2 2 PAN domain MyTH4 PF00784.17 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_1 - 0.00021 21.7 1.9 0.28 11.7 0.1 2.2 1 1 1 2 2 2 2 MyTH4 domain DUF3864 PF12980.7 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_1 - 0.56 10.6 5.0 4.9 7.5 0.3 3.0 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3864) DUF4416 PF14385.6 NODE_53750_length_327_cov_103.119863_g45821_i0forward_frame_1 - 0.019 14.9 2.9 0.023 14.6 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4416) Glucos_trans_II PF14264.6 NODE_53750_length_327_cov_103.119863_g45821_i0forward_frame_1 - 0.079 12.3 4.8 0.088 12.1 4.8 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII RLAN PF14401.6 NODE_53745_length_327_cov_113.657534_g45816_i0reverse_frame_1 - 0.15 11.7 0.0 0.16 11.6 0.0 1.3 1 1 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain YafQ_toxin PF15738.5 NODE_53745_length_327_cov_113.657534_g45816_i0forward_frame_1 - 0.087 13.1 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin of type II toxin-antitoxin system, YafQ ALF PF03752.13 NODE_53743_length_327_cov_145.708904_g45814_i0forward_frame_1 - 0.019 14.9 0.0 0.032 14.2 0.0 1.3 1 0 0 1 1 1 0 Short repeats of unknown function CAP_N PF01213.19 NODE_53734_length_327_cov_245.157534_g45805_i0forward_frame_1 - 0.5 9.8 7.0 0.57 9.6 7.0 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Ribosomal_S14 PF00253.21 NODE_53724_length_327_cov_4089.599315_g45796_i0forward_frame_1 - 3e-11 42.9 4.2 4.4e-11 42.4 1.5 2.0 1 1 1 2 2 2 1 Ribosomal protein S14p/S29e Baculo_LEF-11 PF06385.12 NODE_53718_length_328_cov_1.276451_g45790_i0forward_frame_2 - 0.0069 16.9 1.2 0.0089 16.5 0.9 1.4 1 1 0 1 1 1 1 Baculovirus LEF-11 protein ABC_tran PF00005.27 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 2.7e-08 34.4 0.0 3.3e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.002 17.8 0.0 0.0032 17.2 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.0025 17.7 0.0 0.0027 17.7 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.0041 16.9 0.1 0.0044 16.8 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.0079 16.1 0.0 0.0088 16.0 0.0 1.1 1 0 0 1 1 1 1 NACHT domain AAA_23 PF13476.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.0082 16.7 0.0 0.0087 16.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain IIGP PF05049.13 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.012 14.7 0.0 0.016 14.3 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA PF00004.29 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.014 15.8 0.0 0.016 15.7 0.0 1.1 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.018 14.8 0.0 0.02 14.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Mg_chelatase PF01078.21 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.028 13.8 0.0 0.035 13.5 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.028 13.9 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region DLIC PF05783.11 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.071 11.9 0.0 0.08 11.8 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_22 PF13401.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.076 13.3 0.0 0.086 13.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.078 12.6 0.0 0.095 12.3 0.0 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.084 13.2 0.0 0.084 13.2 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.092 13.1 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_5 PF07728.14 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.095 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.11 12.6 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.16 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.17 11.6 0.1 0.26 11.0 0.1 1.3 1 1 0 1 1 1 0 AAA domain DUF815 PF05673.13 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.17 11.0 0.0 0.19 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Roc PF08477.13 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.22 11.8 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase APC_u14 PF16635.5 NODE_53712_length_328_cov_1.406143_g45784_i0reverse_frame_3 - 0.44 11.1 10.1 0.54 10.8 9.3 1.7 1 1 1 2 2 2 0 Unstructured region on APC between SAMP and APC_crr CAML PF14963.6 NODE_53712_length_328_cov_1.406143_g45784_i0reverse_frame_3 - 1.4 9.0 4.9 1.5 8.9 4.9 1.0 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand DUF3963 PF13124.6 NODE_53710_length_328_cov_1.467577_g45782_i0forward_frame_2 - 0.032 14.2 1.3 0.34 10.9 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3963) cNMP_binding PF00027.29 NODE_53708_length_328_cov_1.556314_g45780_i0forward_frame_2 - 0.00015 21.8 0.0 0.008 16.2 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain LXG PF04740.12 NODE_53707_length_328_cov_1.597270_g45779_i0reverse_frame_2 - 0.0061 16.3 2.5 0.0076 16.0 2.5 1.0 1 0 0 1 1 1 1 LXG domain of WXG superfamily Sugar_tr PF00083.24 NODE_53700_length_328_cov_1.781570_g45772_i0forward_frame_2 - 2.4e-09 36.6 1.4 2.5e-09 36.5 1.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_53694_length_328_cov_1.877133_g45766_i0forward_frame_2 - 0.0017 17.4 11.4 0.0021 17.0 11.4 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Herpes_UL7 PF01677.16 NODE_53690_length_328_cov_2.013652_g45762_i0reverse_frame_2 - 0.22 11.2 1.9 0.23 11.2 1.9 1.1 1 0 0 1 1 1 0 Herpesvirus UL7 like PABP PF00658.18 NODE_53686_length_328_cov_2.215017_g45758_i0reverse_frame_3 - 0.0098 16.1 0.0 0.016 15.3 0.0 1.3 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain Nup188 PF10487.9 NODE_53686_length_328_cov_2.215017_g45758_i0reverse_frame_2 - 0.0018 16.3 0.7 0.0019 16.2 0.7 1.0 1 0 0 1 1 1 1 Nucleoporin subcomplex protein binding to Pom34 Inhibitor_I67 PF11405.8 NODE_53686_length_328_cov_2.215017_g45758_i0reverse_frame_2 - 0.068 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Bromelain inhibitor VI SufE PF02657.15 NODE_53682_length_328_cov_2.293515_g45754_i0reverse_frame_2 - 1.4e-20 73.3 0.0 1.9e-20 73.0 0.0 1.2 1 0 0 1 1 1 1 Fe-S metabolism associated domain Fer4_2 PF12797.7 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.0034 17.4 3.7 0.0055 16.7 3.7 1.3 1 0 0 1 1 1 1 4Fe-4S binding domain Molydop_binding PF01568.21 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.0035 17.4 0.0 0.013 15.5 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Fer4 PF00037.27 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.0051 16.6 4.4 0.0077 16.0 4.4 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_10 PF13237.6 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.03 14.5 4.0 0.058 13.5 4.0 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.043 13.9 4.3 0.065 13.3 4.3 1.3 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_8 PF13183.6 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.15 12.5 4.2 0.2 12.1 4.2 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.31 11.7 6.0 1.3 9.7 6.2 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 1.7 9.3 6.6 2.8 8.7 6.6 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain CAAX_1 PF15895.5 NODE_53681_length_328_cov_2.337884_g45753_i0forward_frame_2 - 0.02 14.8 6.0 0.025 14.5 6.0 1.2 1 0 0 1 1 1 0 CAAX box cerebral protein 1 TPR_2 PF07719.17 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 1.1e-16 59.5 0.3 4.1e-05 23.4 0.3 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 2.1e-16 58.9 1.3 1.3e-05 24.8 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 5e-12 45.0 3.5 0.0026 17.9 0.1 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 7.5e-10 39.3 0.1 3.5e-07 30.8 0.1 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 2.2e-08 34.2 2.5 0.014 16.0 0.3 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 4.7e-08 32.5 1.3 0.22 11.6 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 9.6e-08 31.6 3.5 0.011 15.4 0.3 3.3 1 1 2 3 3 3 2 TPR repeat TPR_12 PF13424.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 1.6e-05 25.1 0.1 0.015 15.6 0.1 2.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 1.9e-05 24.7 1.7 0.00013 22.1 0.2 2.7 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 2e-05 25.0 1.4 0.00082 19.8 0.8 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 3e-05 24.1 0.0 0.00077 19.6 0.0 2.2 1 1 1 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 0.00012 22.3 0.2 0.00018 21.7 0.2 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 MIT PF04212.18 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 0.00038 20.5 1.7 0.35 11.0 0.0 3.3 2 1 1 3 3 3 1 MIT (microtubule interacting and transport) domain TPR_14 PF13428.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 0.0019 18.8 0.0 2 9.4 0.0 2.9 2 1 1 3 3 3 2 Tetratricopeptide repeat DUF3808 PF10300.9 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 0.0023 16.8 0.2 0.0031 16.3 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3808) DcuC PF03606.15 NODE_53676_length_328_cov_2.655290_g45748_i0forward_frame_2 - 3.7e-26 91.6 9.7 4e-26 91.5 9.7 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks215.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks215.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks215.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks215.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FRG1 PF06229.12 NODE_53668_length_328_cov_3.232082_g45740_i0forward_frame_2 - 0.2 11.3 0.0 0.26 11.0 0.0 1.1 1 0 0 1 1 1 0 FRG1-like domain zf-C2H2_10 PF16588.5 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_3 - 0.053 13.3 6.6 0.087 12.6 6.6 1.3 1 0 0 1 1 1 0 C2H2 zinc-finger CobA_CobO_BtuR PF02572.15 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_3 - 0.16 12.2 0.9 0.16 12.2 0.9 3.0 3 1 0 3 3 3 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP zf-CCHC PF00098.23 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_3 - 0.24 11.5 6.8 0.39 10.9 6.8 1.4 1 0 0 1 1 1 0 Zinc knuckle Ribosomal_S8e PF01201.22 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_2 - 3.8 7.7 7.4 4.2 7.5 7.4 1.2 1 0 0 1 1 1 0 Ribosomal protein S8e TMEMspv1-c74-12 PF11044.8 NODE_53667_length_328_cov_3.522184_g45739_i0forward_frame_2 - 4 7.5 3.9 0.95 9.5 0.3 1.7 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF2457 PF10446.9 NODE_53666_length_328_cov_3.795222_g45738_i0forward_frame_2 - 0.25 10.5 6.4 0.24 10.5 6.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Ras PF00071.22 NODE_53664_length_328_cov_4.020478_g45736_i0forward_frame_3 - 6.4e-14 51.9 0.1 8e-14 51.6 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_53664_length_328_cov_4.020478_g45736_i0forward_frame_3 - 7.8e-11 42.2 0.1 1.2e-10 41.7 0.1 1.5 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 NODE_53664_length_328_cov_4.020478_g45736_i0forward_frame_3 - 0.0018 17.7 0.0 0.0021 17.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein MMR_HSR1 PF01926.23 NODE_53664_length_328_cov_4.020478_g45736_i0forward_frame_3 - 0.003 17.6 0.0 0.0037 17.3 0.0 1.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase Arf PF00025.21 NODE_53664_length_328_cov_4.020478_g45736_i0forward_frame_3 - 0.044 13.2 0.0 0.052 13.0 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family DUF4834 PF16118.5 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_2 - 0.013 16.4 1.9 0.018 16.0 1.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_2 - 0.9 10.5 8.5 1.9 9.4 8.5 1.8 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain GBV-C_env PF12786.7 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_2 - 9.6 4.8 7.7 11 4.6 7.7 1.1 1 0 0 1 1 1 0 GB virus C genotype envelope DUF4400 PF14348.6 NODE_53662_length_328_cov_4.976109_g45734_i0forward_frame_3 - 0.0098 15.4 1.7 0.016 14.8 1.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4400) BatD PF13584.6 NODE_53662_length_328_cov_4.976109_g45734_i0forward_frame_3 - 0.031 13.1 0.1 0.047 12.5 0.1 1.3 1 0 0 1 1 1 0 Oxygen tolerance vMSA PF00695.19 NODE_53662_length_328_cov_4.976109_g45734_i0forward_frame_3 - 0.044 12.9 6.4 0.062 12.4 6.4 1.3 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Orf78 PF06024.12 NODE_53662_length_328_cov_4.976109_g45734_i0forward_frame_3 - 0.48 10.7 8.3 1.3 9.4 8.3 1.7 1 1 0 1 1 1 0 Orf78 (ac78) DUF3849 PF12960.7 NODE_53654_length_328_cov_59.119454_g45726_i0reverse_frame_2 - 0.013 15.5 0.6 0.026 14.5 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3849) GBP_C PF02841.14 NODE_53652_length_328_cov_61.894198_g45724_i0forward_frame_2 - 0.0088 15.5 3.9 0.01 15.2 3.9 1.2 1 1 0 1 1 1 1 Guanylate-binding protein, C-terminal domain DHR10 PF18595.1 NODE_53651_length_328_cov_62.174061_g45723_i0reverse_frame_3 - 0.0046 17.0 2.3 0.0089 16.1 2.0 1.7 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain BRCT_assoc PF12820.7 NODE_53651_length_328_cov_62.174061_g45723_i0reverse_frame_3 - 0.0072 16.2 3.2 0.0078 16.0 3.2 1.1 1 0 0 1 1 1 1 Serine-rich domain associated with BRCT APG17 PF04108.12 NODE_53651_length_328_cov_62.174061_g45723_i0reverse_frame_3 - 0.0078 15.4 2.1 0.0087 15.2 2.1 1.1 1 0 0 1 1 1 1 Autophagy protein Apg17 His_Me_b4a2 PF18275.1 NODE_53646_length_328_cov_72.583618_g45718_i0forward_frame_2 - 0.15 12.2 1.1 0.24 11.5 1.1 1.3 1 0 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain PHD_4 PF16866.5 NODE_53640_length_328_cov_80.716724_g45712_i0reverse_frame_3 - 0.11 12.6 1.9 0.14 12.2 0.2 1.9 2 1 0 2 2 2 0 PHD-finger CCDC-167 PF15188.6 NODE_53635_length_328_cov_92.590444_g45707_i0forward_frame_2 - 0.063 13.6 1.6 0.078 13.3 1.6 1.4 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 CagY_I PF14585.6 NODE_53635_length_328_cov_92.590444_g45707_i0forward_frame_2 - 0.64 10.2 7.6 0.13 12.3 2.3 2.0 1 1 1 2 2 2 0 CagY type 1 repeat Ras PF00071.22 NODE_53634_length_328_cov_95.542662_g40275_i1reverse_frame_2 - 0.11 12.1 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Ras family CAP_N PF01213.19 NODE_53632_length_328_cov_99.412969_g45705_i0reverse_frame_3 - 0.23 10.9 3.6 0.28 10.6 3.6 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal FTSW_RODA_SPOVE PF01098.19 NODE_53628_length_328_cov_122.122867_g45701_i0reverse_frame_2 - 0.072 12.1 0.1 0.076 12.0 0.1 1.0 1 0 0 1 1 1 0 Cell cycle protein Fer4_21 PF14697.6 NODE_53625_length_328_cov_130.385666_g45698_i0reverse_frame_3 - 2.6 8.2 8.1 19 5.5 8.2 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain 3-alpha PF03475.14 NODE_53622_length_328_cov_143.443686_g45695_i0forward_frame_3 - 0.099 12.5 0.1 0.18 11.7 0.1 1.4 1 0 0 1 1 1 0 3-alpha domain COX7B PF05392.11 NODE_53609_length_328_cov_599.689420_g45682_i0reverse_frame_2 - 0.1 12.3 0.1 0.2 11.3 0.0 1.4 1 1 0 1 1 1 0 Cytochrome C oxidase chain VIIB Lge1 PF11488.8 NODE_53602_length_329_cov_1.421769_g45675_i0forward_frame_3 - 0.2 11.9 6.4 2.5 8.3 6.4 2.3 1 1 0 1 1 1 0 Transcriptional regulatory protein LGE1 DUF4781 PF16013.5 NODE_53598_length_329_cov_1.714286_g45671_i0forward_frame_2 - 0.1 11.4 0.7 0.15 10.9 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4781) PapD_N PF00345.20 NODE_53596_length_329_cov_1.795918_g45669_i0reverse_frame_2 - 3e-10 40.1 0.1 4e-10 39.7 0.1 1.2 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain Homeodomain PF00046.29 NODE_53595_length_329_cov_1.891156_g45668_i0forward_frame_3 - 0.003 17.3 0.1 0.0043 16.9 0.1 1.2 1 0 0 1 1 1 1 Homeodomain HTH_28 PF13518.6 NODE_53595_length_329_cov_1.891156_g45668_i0forward_frame_3 - 0.1 12.7 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain VAD1-2 PF15310.6 NODE_53593_length_329_cov_1.952381_g45666_i0reverse_frame_3 - 0.18 11.7 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 Vitamin A-deficiency (VAD) rat model signalling PsaF PF17550.2 NODE_53593_length_329_cov_1.952381_g45666_i0reverse_frame_2 - 0.038 13.5 0.1 0.044 13.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function Jnk-SapK_ap_N PF09744.9 NODE_53591_length_329_cov_2.040816_g45664_i0reverse_frame_3 - 0.014 15.7 4.4 0.018 15.3 4.4 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 MtrA PF04208.14 NODE_53591_length_329_cov_2.040816_g45664_i0reverse_frame_3 - 0.064 12.9 0.2 0.072 12.7 0.2 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit A FliD_N PF02465.18 NODE_53591_length_329_cov_2.040816_g45664_i0reverse_frame_3 - 2.5 8.9 5.8 6.1 7.6 0.6 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus HMW1C_N PF18071.1 NODE_53591_length_329_cov_2.040816_g45664_i0forward_frame_2 - 0.078 12.8 0.7 0.1 12.4 0.7 1.2 1 0 0 1 1 1 0 HMW1C N-terminal YfzA PF14118.6 NODE_53590_length_329_cov_2.061224_g45663_i0reverse_frame_2 - 0.015 15.7 0.2 0.022 15.2 0.2 1.3 1 0 0 1 1 1 0 YfzA-like protein FAD_binding_2 PF00890.24 NODE_53588_length_329_cov_2.132653_g45661_i0reverse_frame_3 - 0.0027 16.8 0.1 0.057 12.5 0.0 2.0 1 1 1 2 2 2 2 FAD binding domain Pyr_redox PF00070.27 NODE_53588_length_329_cov_2.132653_g45661_i0reverse_frame_3 - 0.017 15.6 0.0 0.95 10.1 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 NODE_53588_length_329_cov_2.132653_g45661_i0reverse_frame_3 - 0.027 14.1 0.0 0.027 14.1 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 NODE_53588_length_329_cov_2.132653_g45661_i0reverse_frame_3 - 0.053 12.8 0.0 0.055 12.7 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain Dpy19 PF10034.9 NODE_53587_length_329_cov_2.173469_g45660_i0forward_frame_2 - 0.0008 17.7 1.1 0.0008 17.7 1.1 1.0 1 0 0 1 1 1 1 Q-cell neuroblast polarisation DUF2204 PF09970.9 NODE_53587_length_329_cov_2.173469_g45660_i0forward_frame_2 - 0.079 12.6 0.1 0.084 12.5 0.1 1.1 1 0 0 1 1 1 0 Nucleotidyl transferase of unknown function (DUF2204) AAA_12 PF13087.6 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.021 14.5 1.1 0.029 14.0 1.1 1.2 1 0 0 1 1 1 0 AAA domain PCEMA1 PF07418.11 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.11 12.0 8.4 0.13 11.8 8.4 1.0 1 0 0 1 1 1 0 Acidic phosphoprotein precursor PCEMA1 Presenilin PF01080.17 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.15 10.8 4.0 0.17 10.6 4.0 1.0 1 0 0 1 1 1 0 Presenilin BIV_Env PF05858.12 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.17 10.1 0.7 0.2 9.8 0.7 1.0 1 0 0 1 1 1 0 Bovine immunodeficiency virus surface protein (SU) V_ATPase_I PF01496.19 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.34 8.8 6.9 0.4 8.5 6.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4407 PF14362.6 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.7 9.2 5.7 0.82 9.0 5.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) LCD1 PF09798.9 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 2.6 6.5 13.4 3.1 6.2 13.4 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein Sec62 PF03839.16 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 4.6 6.7 8.9 5.9 6.3 8.9 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 SAYSvFN PF10260.9 NODE_53585_length_329_cov_2.244898_g45658_i0forward_frame_3 - 0.026 14.4 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved domain (SAYSvFN) GWT1 PF06423.12 NODE_53581_length_329_cov_2.408163_g45654_i0reverse_frame_2 - 0.07 13.3 0.8 0.081 13.0 0.8 1.1 1 0 0 1 1 1 0 GWT1 Herpes_BLLF1 PF05109.13 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_2 - 0.011 13.8 0.1 0.012 13.6 0.1 1.0 1 0 0 1 1 1 0 Herpes virus major outer envelope glycoprotein (BLLF1) RNA_pol_A_CTD PF03118.15 NODE_53574_length_329_cov_2.778912_g45647_i0reverse_frame_2 - 0.16 11.8 0.1 0.28 11.0 0.1 1.4 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain PapC_N PF13954.6 NODE_53574_length_329_cov_2.778912_g45647_i0forward_frame_2 - 8.9e-26 90.6 0.0 1e-25 90.5 0.0 1.0 1 0 0 1 1 1 1 PapC N-terminal domain NTP_transf_3 PF12804.7 NODE_53573_length_329_cov_2.996599_g45646_i0reverse_frame_2 - 6.1e-15 55.9 0.2 7.5e-15 55.6 0.2 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 NODE_53573_length_329_cov_2.996599_g45646_i0reverse_frame_2 - 0.0058 16.4 0.1 0.007 16.1 0.1 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF1040 PF06288.13 NODE_53573_length_329_cov_2.996599_g45646_i0forward_frame_2 - 0.00011 22.5 0.2 0.00019 21.7 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) Tat PF00539.18 NODE_53570_length_329_cov_3.843537_g45643_i0forward_frame_3 - 0.017 15.3 0.1 0.024 14.8 0.1 1.3 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) DUF4131 PF13567.6 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_2 - 0.0057 16.3 2.2 0.0057 16.3 2.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) Wzy_C PF04932.15 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_2 - 0.021 14.5 0.2 0.024 14.3 0.2 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF4834 PF16118.5 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_2 - 0.23 12.4 4.4 0.49 11.4 4.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DUF2393 PF09624.10 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_2 - 1 9.4 11.2 1.5 8.9 10.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2393) CBP_BcsG PF11658.8 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 0.16 10.3 5.1 0.19 10.1 5.1 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG CobD_Cbib PF03186.13 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 0.38 9.9 5.9 0.42 9.8 5.9 1.3 1 0 0 1 1 1 0 CobD/Cbib protein YfhO PF09586.10 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 0.42 8.8 4.0 0.48 8.6 4.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF4834 PF16118.5 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 1.7 9.7 18.8 1.2e+02 3.8 18.8 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) LMF1 PF06762.14 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 6.4 5.8 10.0 6.8 5.7 10.0 1.0 1 0 0 1 1 1 0 Lipase maturation factor TEX29 PF15839.5 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_2 - 0.13 12.8 3.0 0.2 12.3 3.0 1.2 1 0 0 1 1 1 0 Testis-expressed sequence 29 protein Transformer PF06495.11 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_2 - 0.14 12.2 16.4 0.16 12.0 16.4 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein SR-25 PF10500.9 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_2 - 0.84 9.2 15.1 0.99 9.0 15.1 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RSB_motif PF16294.5 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_2 - 1.7 9.0 7.6 2.6 8.4 7.6 1.2 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif C1ORF64 PF15547.6 NODE_53565_length_329_cov_36.629252_g45638_i0reverse_frame_2 - 0.13 12.7 0.5 0.56 10.7 0.5 1.9 1 1 0 1 1 1 0 Steroid receptor-associated and regulated protein SAE2 PF08573.10 NODE_53565_length_329_cov_36.629252_g45638_i0forward_frame_2 - 0.37 11.9 5.4 0.45 11.7 5.4 1.1 1 0 0 1 1 1 0 DNA repair protein endonuclease SAE2/CtIP C-terminus DUF3256 PF11644.8 NODE_53564_length_329_cov_41.690476_g45637_i0reverse_frame_2 - 0.00058 19.4 4.9 0.00068 19.2 4.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3256) NTP_transf_4 PF13562.6 NODE_53564_length_329_cov_41.690476_g45637_i0reverse_frame_2 - 0.03 14.5 0.7 0.038 14.2 0.7 1.2 1 0 0 1 1 1 0 Sugar nucleotidyl transferase DUF87 PF01935.17 NODE_53564_length_329_cov_41.690476_g45637_i0reverse_frame_2 - 1.5 8.9 5.1 1.6 8.7 5.1 1.0 1 0 0 1 1 1 0 Helicase HerA, central domain Parathyroid PF01279.17 NODE_53561_length_329_cov_51.629252_g45634_i0reverse_frame_2 - 0.12 13.0 0.1 0.14 12.8 0.1 1.1 1 0 0 1 1 1 0 Parathyroid hormone family Megourin PF17560.2 NODE_53561_length_329_cov_51.629252_g45634_i0forward_frame_2 - 0.18 12.1 2.0 0.22 11.8 0.8 1.7 2 0 0 2 2 2 0 Aphid Megourins FDX-ACB PF03147.14 NODE_53556_length_329_cov_61.166667_g45629_i0forward_frame_2 - 0.00079 19.8 0.0 0.00099 19.5 0.0 1.1 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain Adeno_E3_15_3 PF03307.14 NODE_53555_length_329_cov_62.982993_g45628_i0reverse_frame_3 - 0.074 13.0 0.1 0.088 12.8 0.1 1.3 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region DUF1441 PF07278.11 NODE_53555_length_329_cov_62.982993_g45628_i0reverse_frame_3 - 0.082 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1441) TMEM52 PF14979.6 NODE_53553_length_329_cov_65.000000_g45626_i0forward_frame_3 - 0.18 11.7 0.4 0.24 11.3 0.4 1.2 1 0 0 1 1 1 0 Transmembrane 52 ADH_N_assoc PF13823.6 NODE_53553_length_329_cov_65.000000_g45626_i0forward_frame_3 - 0.32 11.0 0.5 0.47 10.4 0.5 1.2 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-associated Pox_E10 PF04805.12 NODE_53550_length_329_cov_74.459184_g45623_i0forward_frame_3 - 0.53 10.2 3.0 0.89 9.5 3.0 1.3 1 0 0 1 1 1 0 E10-like protein conserved region HTH_16 PF12645.7 NODE_53543_length_329_cov_94.500000_g45616_i0reverse_frame_2 - 0.033 14.3 0.0 0.052 13.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Dickkopf_N PF04706.12 NODE_53542_length_329_cov_101.517007_g45615_i0reverse_frame_2 - 2.6 8.6 7.3 0.41 11.2 1.7 2.1 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region ubiquitin PF00240.23 NODE_53537_length_329_cov_116.574830_g45610_i0reverse_frame_3 - 3e-06 26.9 0.0 3.8e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 NODE_53537_length_329_cov_116.574830_g45610_i0reverse_frame_3 - 0.00031 21.1 0.1 0.001 19.5 0.1 1.7 1 1 0 1 1 1 1 Ubiquitin-like domain Troponin-I_N PF11636.8 NODE_53522_length_329_cov_495.612245_g45595_i0reverse_frame_2 - 0.19 11.7 4.7 0.49 10.4 4.7 1.8 1 0 0 1 1 1 0 Troponin I residues 1-32 DUF4312 PF14189.6 NODE_53521_length_329_cov_3229.010204_g45594_i0reverse_frame_3 - 0.042 13.8 0.9 0.073 13.1 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) DUF2897 PF11446.8 NODE_53517_length_330_cov_1.342373_g45590_i0forward_frame_2 - 0.22 11.5 1.4 0.35 10.8 0.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) PqiA PF04403.13 NODE_53516_length_330_cov_1.386441_g45589_i0reverse_frame_3 - 0.029 14.2 0.5 0.033 14.0 0.5 1.2 1 0 0 1 1 1 0 Paraquat-inducible protein A TPR_17 PF13431.6 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.00027 21.1 0.9 0.022 15.1 0.2 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.00087 18.9 0.8 0.0016 18.1 0.8 1.4 1 0 0 1 1 1 1 TPR repeat TPR_2 PF07719.17 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.0021 18.0 0.6 0.31 11.3 0.0 2.4 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.01 15.6 2.8 0.56 10.1 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.014 15.5 1.4 0.69 10.3 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Mu-like_Com PF10122.9 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_2 - 0.26 10.8 4.2 0.14 11.7 1.9 1.6 2 0 0 2 2 2 0 Mu-like prophage protein Com RPA_interact_C PF14768.6 NODE_53510_length_330_cov_1.589831_g45583_i0reverse_frame_2 - 0.051 14.1 0.1 0.071 13.7 0.1 1.2 1 0 0 1 1 1 0 Replication protein A interacting C-terminal SLIDE PF09111.10 NODE_53510_length_330_cov_1.589831_g45583_i0forward_frame_2 - 0.047 13.7 0.1 0.062 13.3 0.1 1.1 1 0 0 1 1 1 0 SLIDE DUF4917 PF16263.5 NODE_53509_length_330_cov_1.623729_g45582_i0reverse_frame_2 - 0.073 12.4 0.0 0.087 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4917) TetR_C_3 PF08362.11 NODE_53505_length_330_cov_1.789831_g45578_i0forward_frame_2 - 0.13 12.2 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 YcdC-like protein, C-terminal region DUF3453 PF11935.8 NODE_53503_length_330_cov_1.932203_g45576_i0forward_frame_3 - 0.0054 16.4 0.2 0.0061 16.2 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3453) DUF4018 PF13210.6 NODE_53493_length_330_cov_2.386441_g45566_i0forward_frame_2 - 0.11 12.2 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) Zn_peptidase_2 PF04298.12 NODE_53493_length_330_cov_2.386441_g45566_i0forward_frame_2 - 0.11 11.9 0.1 0.14 11.6 0.1 1.2 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase Resolvase PF00239.21 NODE_53488_length_330_cov_2.772881_g45561_i0forward_frame_3 - 1.3e-11 44.8 0.0 1.5e-11 44.6 0.0 1.0 1 0 0 1 1 1 1 Resolvase, N terminal domain PapD_C PF02753.17 NODE_53487_length_330_cov_3.081356_g45560_i0forward_frame_3 - 4.3e-08 33.4 0.0 5.9e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain TDP43_N PF18694.1 NODE_53486_length_330_cov_3.118644_g45559_i0reverse_frame_3 - 0.019 14.8 0.1 0.029 14.2 0.1 1.3 1 0 0 1 1 1 0 Transactive response DNA-binding protein N-terminal domain Ribosomal_L36e PF01158.18 NODE_53486_length_330_cov_3.118644_g45559_i0reverse_frame_3 - 0.085 13.1 0.6 0.12 12.6 0.6 1.2 1 0 0 1 1 1 0 Ribosomal protein L36e Colicin PF01024.19 NODE_53484_length_330_cov_3.403390_g45557_i0reverse_frame_2 - 0.049 13.5 2.2 0.051 13.5 2.2 1.1 1 0 0 1 1 1 0 Colicin pore forming domain Lamprin PF06403.11 NODE_53478_length_330_cov_7.172881_g45551_i0forward_frame_3 - 0.017 15.1 2.0 0.017 15.1 2.0 2.0 2 0 0 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_53478_length_330_cov_7.172881_g45551_i0forward_frame_2 - 0.4 10.7 9.5 0.1 12.5 6.7 1.4 2 0 0 2 2 2 0 Lamprin Herpes_pp85 PF04637.12 NODE_53475_length_330_cov_15.840678_g45548_i0forward_frame_2 - 0.026 13.0 1.0 0.027 12.9 1.0 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF3099 PF11298.8 NODE_53474_length_330_cov_16.094915_g45547_i0reverse_frame_2 - 0.037 14.2 0.6 0.057 13.6 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) TerB_C PF15615.6 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.0052 17.1 5.1 0.0063 16.8 5.1 1.0 1 0 0 1 1 1 1 TerB-C domain 60KD_IMP PF02096.20 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.034 14.0 0.6 0.048 13.6 0.6 1.2 1 0 0 1 1 1 0 60Kd inner membrane protein OmpH PF03938.14 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.11 12.9 3.3 0.11 12.8 3.3 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.11 11.8 1.4 0.11 11.9 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) MCU PF04678.13 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.12 12.5 2.0 0.18 11.9 2.0 1.3 1 0 0 1 1 1 0 Mitochondrial calcium uniporter RPA_interact_C PF14768.6 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.46 11.1 2.6 1.6 9.3 0.6 2.2 1 1 1 2 2 2 0 Replication protein A interacting C-terminal Phage_Mu_Gam PF07352.12 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.57 10.1 5.0 0.65 9.9 4.8 1.3 1 1 0 1 1 1 0 Bacteriophage Mu Gam like protein YabA PF06156.13 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.7 10.6 4.8 0.75 10.5 4.2 1.5 1 1 0 1 1 1 0 Initiation control protein YabA DUF1658 PF07871.11 NODE_53473_length_330_cov_23.064407_g45546_i0reverse_frame_2 - 6.2 7.0 7.2 46 4.2 2.3 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1658) DUF5330 PF17264.2 NODE_53473_length_330_cov_23.064407_g45546_i0forward_frame_3 - 0.061 13.3 0.6 0.087 12.8 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5330) Abhydrolase_9_N PF15420.6 NODE_53471_length_330_cov_41.138983_g45544_i0reverse_frame_2 - 0.004 17.2 2.7 0.0048 16.9 2.7 1.1 1 0 0 1 1 1 1 Alpha/beta-hydrolase family N-terminus Baculo_F PF12259.8 NODE_53471_length_330_cov_41.138983_g45544_i0reverse_frame_2 - 0.1 11.1 1.1 0.12 10.9 1.1 1.1 1 0 0 1 1 1 0 Baculovirus F protein LRR19-TM PF15176.6 NODE_53471_length_330_cov_41.138983_g45544_i0reverse_frame_2 - 0.12 12.4 0.8 0.15 12.1 0.8 1.2 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain GNVR PF13807.6 NODE_53469_length_330_cov_52.905085_g45542_i0forward_frame_3 - 0.21 11.5 0.0 0.29 11.1 0.0 1.2 1 0 0 1 1 1 0 G-rich domain on putative tyrosine kinase Glyco_hydro_cc PF11790.8 NODE_53468_length_330_cov_58.203390_g45541_i0reverse_frame_2 - 0.1 12.1 0.5 1.2 8.6 0.2 1.9 1 1 1 2 2 2 0 Glycosyl hydrolase catalytic core Sperm_Ag_HE2 PF05324.13 NODE_53465_length_330_cov_63.122034_g45539_i0reverse_frame_2 - 0.051 14.0 0.1 0.16 12.5 0.1 1.7 2 0 0 2 2 2 0 Sperm antigen HE2 Cupin_3 PF05899.12 NODE_53465_length_330_cov_63.122034_g45539_i0forward_frame_2 - 1.9e-06 27.4 0.0 3.2e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 NODE_53465_length_330_cov_63.122034_g45539_i0forward_frame_2 - 0.0093 15.7 0.0 0.013 15.2 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_6 PF12852.7 NODE_53465_length_330_cov_63.122034_g45539_i0forward_frame_2 - 0.16 11.7 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Cupin mRNA_cap_C PF03919.15 NODE_53458_length_330_cov_69.959322_g45532_i0reverse_frame_3 - 0.0031 18.1 0.1 0.0039 17.8 0.1 1.1 1 0 0 1 1 1 1 mRNA capping enzyme, C-terminal domain N-glycanase_C PF09113.10 NODE_53458_length_330_cov_69.959322_g45532_i0reverse_frame_3 - 0.052 13.3 0.0 0.055 13.2 0.0 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal TerB_N PF13208.6 NODE_53457_length_330_cov_70.359322_g45531_i0reverse_frame_3 - 0.084 12.6 0.0 0.099 12.3 0.0 1.1 1 0 0 1 1 1 0 TerB N-terminal domain CaATP_NAI PF12515.8 NODE_53457_length_330_cov_70.359322_g45531_i0reverse_frame_3 - 5 6.8 8.4 11 5.7 1.3 2.9 2 1 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain PNMA PF14893.6 NODE_53457_length_330_cov_70.359322_g45531_i0forward_frame_2 - 0.011 15.1 0.0 0.013 14.9 0.0 1.1 1 0 0 1 1 1 0 PNMA C2-set_2 PF08205.12 NODE_53453_length_330_cov_76.552542_g45527_i0reverse_frame_2 - 0.03 14.4 0.1 0.038 14.1 0.1 1.2 1 0 0 1 1 1 0 CD80-like C2-set immunoglobulin domain UPF0731 PF14982.6 NODE_53453_length_330_cov_76.552542_g45527_i0reverse_frame_2 - 0.21 11.8 3.4 0.19 11.9 2.4 1.5 1 1 0 1 1 1 0 UPF0731 family SHR3_chaperone PF08229.11 NODE_53446_length_330_cov_93.061017_g45520_i0forward_frame_2 - 0.4 9.6 4.7 0.47 9.4 4.7 1.2 1 0 0 1 1 1 0 ER membrane protein SH3 DUF5634 PF18681.1 NODE_53444_length_330_cov_99.494915_g45518_i0reverse_frame_3 - 0.033 14.5 0.5 0.07 13.5 0.1 1.6 1 1 1 2 2 2 0 Family of unknown function (DUF5634) Thioredoxin_8 PF13905.6 NODE_53444_length_330_cov_99.494915_g45518_i0reverse_frame_3 - 0.11 12.8 0.1 0.16 12.3 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like Gelsolin PF00626.22 NODE_53443_length_330_cov_101.945763_g45517_i0reverse_frame_2 - 0.047 13.6 0.1 0.072 13.0 0.1 1.3 1 0 0 1 1 1 0 Gelsolin repeat Hydrophobin_2 PF06766.11 NODE_53430_length_330_cov_344.301695_g45504_i0reverse_frame_2 - 0.0016 18.4 1.2 0.0022 17.9 1.2 1.2 1 0 0 1 1 1 1 Fungal hydrophobin Tom22 PF04281.13 NODE_53429_length_330_cov_372.552542_g45503_i0reverse_frame_2 - 0.0059 16.4 0.0 0.0088 15.8 0.0 1.3 1 1 0 1 1 1 1 Mitochondrial import receptor subunit Tom22 Stc1 PF12898.7 ORF99967 - 0.0085 16.6 0.2 0.21 12.2 0.2 2.2 1 1 0 1 1 1 1 Stc1 domain Ima1_N PF09779.9 ORF99967 - 0.054 14.4 0.6 0.61 10.9 0.0 2.1 1 1 1 2 2 2 0 Ima1 N-terminal domain Ribosomal_S14 PF00253.21 ORF99967 - 0.078 12.8 5.1 4.7 7.1 0.1 3.0 3 0 0 3 3 3 0 Ribosomal protein S14p/S29e HXXEE PF13787.6 ORF99967 - 0.12 13.1 0.0 1.8 9.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function with HXXEE motif DUF951 PF06107.11 ORF99967 - 2.2 8.3 4.9 5.2 7.1 0.2 2.6 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF951) zf-RING_12 PF17976.1 ORF99967 - 2.8 8.3 5.7 17 5.8 0.1 2.9 1 1 2 3 3 3 0 RING/Ubox like zinc-binding domain Sgf11 PF08209.11 ORF99967 - 8.5 6.0 12.2 10 5.8 0.5 3.2 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) Ribosomal_S19e PF01090.19 ORF98907 - 4.1e-35 120.4 0.0 4.7e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Peptidase_S10 PF00450.22 ORF9867 - 7e-14 52.1 0.0 7.4e-14 52.0 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Yae1_N PF09811.9 ORF98228 - 0.16 11.7 0.1 0.27 11.0 0.1 1.4 1 0 0 1 1 1 0 Essential protein Yae1, N terminal Ly49 PF08391.10 ORF97905 - 0.00018 21.9 2.7 0.00021 21.7 2.7 1.1 1 0 0 1 1 1 1 Ly49-like protein, N-terminal region Alpha_GJ PF03229.13 ORF97467 - 0.025 15.2 5.2 0.031 14.8 5.2 1.1 1 0 0 1 1 1 0 Alphavirus glycoprotein J DUF5442 PF17514.2 ORF97247 - 0.038 14.2 1.1 0.046 13.9 1.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5442) DUF4372 PF14294.6 ORF97247 - 0.069 13.3 0.3 0.11 12.7 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4372) TusA PF01206.17 ORF96675 - 0.06 13.2 0.0 5.2 7.0 0.0 2.2 2 0 0 2 2 2 0 Sulfurtransferase TusA CPSase_sm_chain PF00988.22 ORF96675 - 0.062 13.1 2.3 6 6.7 0.1 2.1 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase small chain, CPSase domain LRRC37 PF15779.5 ORF96675 - 0.38 11.1 4.2 3.6 8.0 0.5 2.1 2 0 0 2 2 2 0 Leucine-rich repeat-containing protein 37 family CheR_N PF03705.15 ORF96675 - 7.3 6.4 7.8 13 5.6 1.4 2.2 2 0 0 2 2 2 0 CheR methyltransferase, all-alpha domain K-cyclin_vir_C PF09080.10 ORF95555 - 0.06 13.8 0.1 0.096 13.1 0.1 1.4 1 1 0 1 1 1 0 K cyclin, C terminal SoPB_HTH PF18090.1 ORF95274 - 0.13 12.5 0.1 0.24 11.6 0.1 1.4 1 0 0 1 1 1 0 Centromere-binding protein HTH domain YlzJ PF14035.6 ORF94788 - 0.013 15.7 0.0 0.037 14.2 0.0 1.8 2 0 0 2 2 2 0 YlzJ-like protein IpaB_EvcA PF03278.13 ORF9435 - 0.0032 17.2 0.1 0.0038 16.9 0.1 1.3 1 0 0 1 1 1 1 IpaB/EvcA family DinI PF06183.13 ORF94143 - 0.11 12.9 0.1 0.21 12.0 0.1 1.4 1 0 0 1 1 1 0 DinI-like family Rep_fac-A_C PF08646.10 ORF94138 - 2.7e-08 33.7 0.1 3.2e-08 33.5 0.1 1.2 1 1 0 1 1 1 1 Replication factor-A C terminal domain PRP38_assoc PF12871.7 ORF93375 - 0.037 14.6 2.6 0.052 14.2 2.6 1.3 1 0 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Presenilin PF01080.17 ORF92877 - 0.36 9.5 2.2 0.43 9.3 2.2 1.1 1 0 0 1 1 1 0 Presenilin RAG1 PF12940.7 ORF91056 - 0.066 11.3 0.0 0.066 11.3 0.0 1.0 1 0 0 1 1 1 0 Recombination-activation protein 1 (RAG1), recombinase AAA_13 PF13166.6 ORF90526 - 0.0075 15.0 9.5 0.0085 14.8 9.5 1.0 1 0 0 1 1 1 1 AAA domain DUF1910 PF08928.10 ORF90526 - 0.048 13.7 5.1 0.094 12.7 5.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1910) DUF883 PF05957.13 ORF90526 - 0.14 12.8 1.2 0.32 11.6 1.0 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CorA PF01544.18 ORF90526 - 0.28 10.5 3.7 0.33 10.2 3.7 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Nup88 PF10168.9 ORF90526 - 0.54 8.0 8.2 0.66 7.7 8.2 1.0 1 0 0 1 1 1 0 Nuclear pore component DUF1515 PF07439.11 ORF90526 - 0.55 10.3 4.2 0.64 10.1 3.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) Fzo_mitofusin PF04799.13 ORF90526 - 0.9 9.1 6.9 0.69 9.5 3.3 1.9 1 1 1 2 2 2 0 fzo-like conserved region Exonuc_VII_L PF02601.15 ORF90526 - 1.3 8.5 6.0 1.5 8.4 6.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit TMPIT PF07851.13 ORF90526 - 1.5 8.0 8.0 1.9 7.7 8.0 1.3 1 1 0 1 1 1 0 TMPIT-like protein SnoaL_4 PF13577.6 ORF90395 - 0.018 15.2 0.5 0.02 15.0 0.5 1.2 1 0 0 1 1 1 0 SnoaL-like domain PARP PF00644.20 ORF90310 - 0.04 13.5 1.8 0.042 13.4 1.8 1.1 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain RR_TM4-6 PF06459.12 ORF90310 - 0.069 13.0 9.5 0.082 12.7 9.5 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 GAGA_bind PF06217.12 ORF90310 - 0.1 12.8 6.4 0.12 12.7 6.4 1.0 1 0 0 1 1 1 0 GAGA binding protein-like family FlgN PF05130.12 ORF90032 - 0.1 13.1 7.0 0.13 12.8 7.0 1.2 1 0 0 1 1 1 0 FlgN protein KIP1 PF07765.12 ORF90032 - 8.1 6.6 10.6 0.28 11.3 0.9 2.4 2 1 0 2 2 2 0 KIP1-like protein Peripla_BP_2 PF01497.18 ORF89738 - 1.8e-09 37.6 0.0 2.1e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Ribosomal_S12 PF17487.2 ORF89089 - 0.075 13.8 0.9 0.14 12.9 0.4 1.6 1 1 1 2 2 2 0 Ribosomal protein S12 Mtc PF03820.17 ORF88868 - 6.6e-16 58.2 10.5 7.2e-16 58.1 10.5 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier zf-C2H2 PF00096.26 ORF87825 - 1.3e-16 60.0 13.9 5.9e-07 29.6 2.1 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF87825 - 5.4e-13 48.7 7.1 6.4e-06 26.4 2.0 2.5 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF87825 - 7.3e-11 41.9 11.2 0.00035 21.2 1.2 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_5 PF13909.6 ORF87825 - 3.3e-08 33.1 3.0 3.3e-08 33.1 3.0 3.4 4 0 0 4 4 4 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF87825 - 6.8e-05 23.1 6.7 0.00017 21.8 1.0 2.1 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF87825 - 0.0022 17.7 1.8 0.0045 16.7 0.1 2.1 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-met PF12874.7 ORF87825 - 0.021 15.2 12.1 0.69 10.4 1.4 3.6 3 1 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF87825 - 0.033 14.5 6.9 0.13 12.6 5.6 2.3 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Zn-ribbon_8 PF09723.10 ORF87825 - 0.043 13.9 6.3 0.23 11.6 0.2 2.7 3 0 0 3 3 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF87825 - 0.043 13.8 16.0 0.091 12.8 2.2 3.3 3 1 0 3 3 3 0 C2H2-type zinc finger zinc_ribbon_15 PF17032.5 ORF87825 - 0.053 14.3 5.3 0.055 14.2 4.3 1.5 1 1 1 2 2 2 0 zinc-ribbon family CxC3 PF18804.1 ORF87825 - 0.076 12.9 1.5 0.13 12.1 1.5 1.5 1 1 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases C1_4 PF07975.12 ORF87825 - 0.3 11.4 6.1 4.8 7.5 0.6 2.6 2 1 1 3 3 3 0 TFIIH C1-like domain PyrI_C PF02748.15 ORF87825 - 0.56 10.1 8.6 1.4 8.9 0.3 2.7 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-AN1 PF01428.16 ORF87825 - 1 9.6 9.1 6.9 6.9 0.3 3.3 4 0 0 4 4 3 0 AN1-like Zinc finger zf-C2HE PF16278.5 ORF87825 - 1.2 9.6 7.6 0.89 10.1 1.1 2.4 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger C1_2 PF03107.16 ORF87825 - 2.1 8.8 7.5 9 6.7 0.7 2.8 3 0 0 3 3 2 0 C1 domain Rubredoxin_2 PF18073.1 ORF87825 - 4.2 7.2 8.6 9.4 6.1 0.4 2.8 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-BED PF02892.15 ORF87825 - 8.4 6.5 10.5 4.8 7.3 0.5 2.8 2 1 1 3 3 3 0 BED zinc finger Ly49 PF08391.10 ORF87318 - 0.00018 21.9 2.7 0.00021 21.7 2.7 1.1 1 0 0 1 1 1 1 Ly49-like protein, N-terminal region DUF4689 PF15755.5 ORF87218 - 0.065 12.8 1.0 0.08 12.5 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4689) DUF4795 PF16043.5 ORF85730 - 0.084 12.5 2.5 2.3 7.8 0.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DASH_Dam1 PF08653.10 ORF85730 - 0.13 12.1 0.8 4.1 7.3 0.3 2.7 2 2 0 2 2 2 0 DASH complex subunit Dam1 RBFA PF02033.18 ORF83996 - 0.0095 16.4 0.0 0.013 16.0 0.0 1.2 1 0 0 1 1 1 1 Ribosome-binding factor A Apt1 PF10351.9 ORF83657 - 5.3 5.8 8.8 5.8 5.7 8.8 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Miga PF10265.9 ORF83657 - 6.3 5.7 7.4 6.2 5.7 7.4 1.0 1 0 0 1 1 1 0 Mitoguardin PSD1 PF07587.11 ORF83466 - 0.13 11.7 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1553) Ribosomal_L19e PF01280.20 ORF82897 - 4.4e-19 69.0 7.0 4.4e-19 69.0 7.0 2.0 1 1 1 2 2 2 1 Ribosomal protein L19e PRK PF00485.18 ORF82897 - 0.047 13.4 0.4 0.067 12.9 0.3 1.3 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Band_3_cyto PF07565.13 ORF82897 - 0.91 9.3 7.4 0.99 9.1 7.4 1.0 1 0 0 1 1 1 0 Band 3 cytoplasmic domain Trimer_CC PF08954.11 ORF82593 - 0.11 12.0 0.4 0.11 12.0 0.4 2.1 2 1 0 2 2 2 0 Trimerisation motif IQ PF00612.27 ORF81803 - 0.00017 21.1 7.4 0.39 10.6 0.0 4.2 4 0 0 4 4 4 2 IQ calmodulin-binding motif Nore1-SARAH PF16517.5 ORF81803 - 1.9 8.5 16.6 2.1 8.3 6.0 2.9 1 1 1 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain ArfGap PF01412.18 ORF81803 - 7.7 6.6 20.1 7.7 6.6 5.4 2.2 1 1 1 2 2 2 0 Putative GTPase activating protein for Arf DUF4131 PF13567.6 ORF81251 - 0.026 14.2 2.4 0.036 13.7 2.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks216.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks216.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks216.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks216.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:02:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DBI_PRT PF02277.17 ORF80104 - 2.6e-36 125.5 2.3 2.9e-36 125.4 2.3 1.0 1 0 0 1 1 1 1 Phosphoribosyltransferase zf-RING_11 PF17123.5 ORF79971 - 2.6e-06 27.1 9.6 4.5e-06 26.3 9.6 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF79971 - 0.00012 22.3 7.0 0.00019 21.7 7.0 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF79971 - 0.067 13.2 7.8 0.13 12.3 7.8 1.5 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_5 PF14634.6 ORF79971 - 0.15 12.1 5.1 0.25 11.3 5.1 1.4 1 0 0 1 1 1 0 zinc-RING finger domain Ufd2P_core PF10408.9 ORF79577 - 1.3e-13 50.5 3.6 1.4e-13 50.4 3.6 1.0 1 0 0 1 1 1 1 Ubiquitin elongating factor core DUF3069 PF11269.8 ORF79577 - 0.028 14.7 0.6 0.033 14.4 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3069) Rab15_effector PF15208.6 ORF79152 - 0.031 13.6 0.2 0.04 13.2 0.2 1.2 1 0 0 1 1 1 0 Rab15 effector MPDZ_u10 PF16667.5 ORF79022 - 0.082 13.8 1.2 0.082 13.8 1.2 1.9 1 1 1 2 2 2 0 Unstructured region 10 on multiple PDZ protein ComJ PF11033.8 ORF78180 - 0.022 14.5 0.0 0.028 14.1 0.0 1.1 1 0 0 1 1 1 0 Competence protein J (ComJ) DUF2181 PF10223.9 ORF78180 - 0.22 11.0 0.0 0.23 10.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2181) GTP_EFTU_D4 PF14578.6 ORF78151 - 0.054 13.4 0.1 0.075 12.9 0.1 1.2 1 0 0 1 1 1 0 Elongation factor Tu domain 4 p450 PF00067.22 ORF78063 - 2.3e-20 72.8 0.1 2.6e-20 72.6 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 COX7C PF02935.16 ORF78063 - 0.096 13.0 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc DUF4665 PF15679.5 ORF77943 - 0.013 16.1 4.1 0.031 14.9 4.2 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4665) UPF0240 PF06784.11 ORF77943 - 0.014 15.4 1.4 0.022 14.8 1.4 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0240) SIKE PF05769.11 ORF77943 - 0.048 13.6 3.0 0.054 13.4 3.0 1.1 1 0 0 1 1 1 0 SIKE family AKAP95 PF04988.12 ORF76838 - 0.067 13.4 0.6 0.095 12.9 0.6 1.3 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) zf-RanBP PF00641.18 ORF76838 - 3.2 7.2 9.3 0.17 11.2 2.1 2.5 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others zf-met PF12874.7 ORF76511 - 0.063 13.7 0.2 0.12 12.9 0.2 1.4 1 0 0 1 1 1 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF76511 - 0.074 13.4 0.1 0.091 13.1 0.1 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-CCHC PF00098.23 ORF76317 - 2.3e-05 24.3 2.3 3.8e-05 23.6 2.3 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_4 PF14392.6 ORF76317 - 0.036 13.8 0.3 0.057 13.2 0.3 1.3 1 0 0 1 1 1 0 Zinc knuckle eIF_4EBP PF05456.11 ORF76029 - 0.22 11.5 2.2 1.2 9.1 0.1 2.2 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Roc PF08477.13 ORF75273 - 1.3e-12 48.0 0.0 1.5e-12 47.8 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF75273 - 1.9e-12 47.1 0.1 2.2e-12 46.9 0.1 1.1 1 0 0 1 1 1 1 Ras family MMR_HSR1 PF01926.23 ORF75273 - 0.048 13.7 0.0 0.08 13.0 0.0 1.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase Arf PF00025.21 ORF75273 - 0.056 12.9 0.0 0.059 12.8 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family Spore_IV_A PF09547.10 ORF75273 - 0.075 12.0 0.0 0.088 11.7 0.0 1.2 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) TniB PF05621.11 ORF75273 - 0.075 12.4 0.0 0.09 12.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein AAA PF00004.29 ORF75273 - 0.14 12.6 0.0 0.38 11.2 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 ORF75273 - 0.18 11.3 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region T3SS_ATPase_C PF18269.1 ORF75120 - 4.1e-05 23.4 0.4 0.0002 21.1 0.4 1.9 1 1 0 1 1 1 1 T3SS EscN ATPase C-terminal domain CH_2 PF06294.11 ORF75120 - 0.0019 18.3 0.0 0.091 12.9 0.0 2.0 1 1 1 2 2 2 1 CH-like domain in sperm protein DUF1858 PF08984.11 ORF75120 - 0.0092 16.1 0.0 0.019 15.1 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF1858) Chorion_2 PF03964.15 ORF72350 - 0.13 13.1 2.1 0.19 12.6 2.1 1.2 1 0 0 1 1 1 0 Chorion family 2 DUF446 PF04287.12 ORF6919 - 7.3e-34 115.7 2.6 8.2e-34 115.6 2.6 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase C Erythro-docking PF09277.11 ORF6919 - 0.46 10.4 0.1 0.46 10.4 0.1 2.0 2 0 0 2 2 2 0 Erythronolide synthase, docking TetR_C_23 PF17931.1 ORF6908 - 0.11 12.6 2.6 0.16 12.1 2.6 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CSRNP_N PF16019.5 ORF6908 - 0.72 9.7 7.0 0.81 9.6 7.0 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus ALMT PF11744.8 ORF6908 - 2.8 6.7 7.3 3 6.6 7.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Presenilin PF01080.17 ORF6908 - 8.5 5.0 6.1 9.8 4.8 6.1 1.0 1 0 0 1 1 1 0 Presenilin DUF1294 PF06961.13 ORF69007 - 9.1e-24 83.5 0.2 9.1e-24 83.5 0.2 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1294) Ribosomal_L29 PF00831.23 ORF68293 - 3.4e-10 39.7 1.9 7.5e-10 38.6 1.9 1.5 1 0 0 1 1 1 1 Ribosomal L29 protein Pkinase PF00069.25 ORF67721 - 0.004 16.6 0.0 0.0059 16.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain DARPP-32 PF05395.12 ORF66618 - 0.00082 19.6 3.9 0.00092 19.5 3.9 1.0 1 0 0 1 1 1 1 Protein phosphatase inhibitor 1/DARPP-32 Tektin PF03148.14 ORF66338 - 0.0021 16.9 8.4 0.0023 16.8 8.4 1.0 1 0 0 1 1 1 1 Tektin family DUF812 PF05667.11 ORF66338 - 0.0038 16.2 12.0 0.004 16.1 12.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) UPF0242 PF06785.11 ORF66338 - 0.0056 16.8 8.2 0.0066 16.6 8.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF3450 PF11932.8 ORF66338 - 0.0064 15.8 12.5 0.0082 15.5 12.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Jnk-SapK_ap_N PF09744.9 ORF66338 - 0.0066 16.7 11.2 0.0078 16.4 11.2 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Atg14 PF10186.9 ORF66338 - 0.013 14.6 8.8 0.013 14.6 8.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Rootletin PF15035.6 ORF66338 - 0.016 15.3 9.0 0.016 15.2 9.0 1.1 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion NYD-SP28_assoc PF14775.6 ORF66338 - 0.016 15.3 2.6 0.038 14.1 2.6 1.7 1 0 0 1 1 1 0 Sperm tail C-terminal domain DUF2681 PF10883.8 ORF66338 - 0.02 15.3 7.2 0.54 10.7 7.2 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2681) CENP-F_leu_zip PF10473.9 ORF66338 - 0.02 14.9 12.6 0.023 14.7 12.6 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 APG6_N PF17675.1 ORF66338 - 0.021 15.3 11.2 0.026 15.0 11.2 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region Fzo_mitofusin PF04799.13 ORF66338 - 0.04 13.5 6.6 0.062 12.9 6.6 1.4 1 1 0 1 1 1 0 fzo-like conserved region ZapB PF06005.12 ORF66338 - 0.041 14.3 9.8 0.041 14.3 9.8 2.2 1 1 1 2 2 2 0 Cell division protein ZapB Mod_r PF07200.13 ORF66338 - 0.046 13.8 12.0 0.056 13.6 12.0 1.1 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein DUF4763 PF15960.5 ORF66338 - 0.047 13.0 8.3 0.055 12.8 8.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) DUF1664 PF07889.12 ORF66338 - 0.062 13.3 5.5 0.074 13.1 4.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) HrpB7 PF09486.10 ORF66338 - 0.074 13.4 6.2 0.026 14.9 3.6 1.6 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) TPR_MLP1_2 PF07926.12 ORF66338 - 0.24 11.4 16.6 1.3 9.1 1.9 2.0 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Syntaxin-6_N PF09177.11 ORF66338 - 0.29 11.7 8.4 1 9.9 8.4 1.9 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF66338 - 0.33 10.8 10.7 0.4 10.5 10.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) V-SNARE PF05008.15 ORF66338 - 0.34 11.3 12.5 0.62 10.5 7.4 2.1 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus FlaC_arch PF05377.11 ORF66338 - 0.34 11.3 9.0 0.12 12.8 3.3 2.5 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) TolA_bind_tri PF16331.5 ORF66338 - 0.34 11.0 10.2 0.8 9.8 10.2 1.8 1 1 0 1 1 1 0 TolA binding protein trimerisation ACR_tran PF00873.19 ORF66338 - 0.36 8.4 3.7 0.38 8.4 3.7 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family Shugoshin_N PF07558.11 ORF66338 - 0.43 10.5 14.8 0.95 9.4 1.5 2.6 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region KELK PF15796.5 ORF66338 - 0.57 10.7 12.4 0.48 10.9 7.1 2.1 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Prominin PF05478.11 ORF66338 - 0.58 8.0 6.5 0.57 8.1 6.5 1.0 1 0 0 1 1 1 0 Prominin Cnn_1N PF07989.11 ORF66338 - 0.59 10.3 12.2 0.28 11.4 7.7 2.3 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Connexin PF00029.19 ORF66338 - 0.63 9.8 2.3 0.71 9.6 2.3 1.1 1 0 0 1 1 1 0 Connexin EMC3_TMCO1 PF01956.16 ORF66338 - 0.75 9.5 4.4 1.6 8.4 4.4 1.5 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DivIC PF04977.15 ORF66338 - 0.87 9.4 14.1 0.64 9.8 7.3 2.5 1 1 1 2 2 2 0 Septum formation initiator O-antigen_lig PF13425.6 ORF66338 - 1 8.1 4.5 1.1 8.0 4.5 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Mem_trans PF03547.18 ORF66338 - 1.7 6.9 3.8 1.9 6.8 3.8 1.0 1 0 0 1 1 1 0 Membrane transport protein CLN3 PF02487.17 ORF66338 - 2.3 7.2 4.3 2.2 7.2 4.3 1.0 1 0 0 1 1 1 0 CLN3 protein bZIP_1 PF00170.21 ORF66338 - 2.3 8.4 15.6 1.1 9.5 8.9 2.8 1 1 1 2 2 2 0 bZIP transcription factor TMPIT PF07851.13 ORF66338 - 3.1 7.0 7.3 3.4 6.8 7.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein XhlA PF10779.9 ORF66338 - 3.3 8.0 9.7 0.41 10.9 3.3 2.1 1 1 1 2 2 2 0 Haemolysin XhlA SID-1_RNA_chan PF13965.6 ORF66338 - 3.7 5.9 4.9 3.9 5.8 4.9 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Csm1_N PF18504.1 ORF66338 - 8.7 6.8 15.8 1.3 9.4 7.0 2.2 1 1 1 2 2 2 0 Csm1 N-terminal domain LMBR1 PF04791.16 ORF66338 - 9 5.1 6.9 9.5 5.0 6.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Dynein_light PF01221.18 ORF65965 - 1.1e-20 73.7 0.6 1.5e-20 73.3 0.6 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 DUF2183 PF09949.9 ORF65565 - 0.066 13.6 0.4 0.099 13.0 0.4 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2183) Bac_luciferase PF00296.20 ORF65565 - 0.11 11.9 0.2 0.12 11.8 0.2 1.1 1 0 0 1 1 1 0 Luciferase-like monooxygenase MurB_C PF02873.16 ORF65118 - 0.0069 16.4 0.0 0.0081 16.2 0.0 1.1 1 0 0 1 1 1 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Phage_integrase PF00589.22 ORF64968 - 0.032 14.0 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 Phage integrase family Asp PF00026.23 ORF63564 - 5.2e-06 26.1 0.4 3.7e-05 23.3 0.4 1.9 1 1 0 1 1 1 1 Eukaryotic aspartyl protease Periviscerokin PF08259.11 ORF62868 - 0.77 10.2 5.4 2.7 8.5 1.6 2.7 2 0 0 2 2 2 0 Periviscerokinin family Pkinase PF00069.25 ORF62798 - 2.6e-05 23.7 0.0 2.8e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain FOP_dimer PF09398.10 ORF62739 - 3.3e-12 46.5 0.0 5.2e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF62739 - 1.6e-07 30.2 0.1 2.9e-07 29.4 0.1 1.4 1 0 0 1 1 1 1 LisH DUF4140 PF13600.6 ORF61752 - 0.24 11.9 4.6 0.44 11.0 4.6 1.5 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF3552 PF12072.8 ORF61752 - 0.34 10.3 7.4 0.38 10.1 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) NAD_binding_6 PF08030.12 ORF61121 - 1.2e-05 25.4 0.0 3e-05 24.2 0.0 1.7 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Corona_NS1 PF06145.11 ORF60552 - 0.076 12.5 0.6 0.15 11.6 0.6 1.5 1 0 0 1 1 1 0 Coronavirus nonstructural protein NS1 DUF2452 PF10504.9 ORF59366 - 0.06 12.8 0.8 0.12 11.8 0.6 1.6 1 1 0 2 2 2 0 Protein of unknown function (DUF2452) TetR_C_23 PF17931.1 ORF58605 - 0.11 12.6 2.6 0.16 12.1 2.6 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CSRNP_N PF16019.5 ORF58605 - 0.72 9.7 7.0 0.81 9.6 7.0 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus ALMT PF11744.8 ORF58605 - 2.8 6.7 7.3 3 6.6 7.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Presenilin PF01080.17 ORF58605 - 8.5 5.0 6.1 9.8 4.8 6.1 1.0 1 0 0 1 1 1 0 Presenilin Macscav_rec PF03523.13 ORF57978 - 0.092 12.7 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Macrophage scavenger receptor JmjN PF02375.17 ORF57507 - 9.3e-09 35.1 0.6 1.6e-08 34.3 0.6 1.4 1 0 0 1 1 1 1 jmjN domain Syntaxin PF00804.25 ORF57333 - 0.22 11.2 6.1 0.25 11.0 6.1 1.1 1 0 0 1 1 1 0 Syntaxin CENP-H PF05837.12 ORF57333 - 0.24 11.8 5.6 0.3 11.5 5.6 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) TMPIT PF07851.13 ORF57333 - 0.94 8.7 4.5 1.1 8.5 4.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF4234 PF14018.6 ORF5732 - 2.3 8.4 7.3 9.6 6.4 7.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4234) SapB_2 PF03489.17 ORF57048 - 0.084 13.0 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Saposin-like type B, region 2 Gal_mutarotas_3 PF18080.1 ORF55886 - 0.19 11.7 4.6 0.2 11.6 4.6 1.0 1 0 0 1 1 1 0 Galactose mutarotase-like fold domain Atg14 PF10186.9 ORF55886 - 1.2 8.2 11.7 1.3 8.0 11.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4955 PF16315.5 ORF53438 - 0.014 15.6 0.0 0.019 15.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4955) TTD PF12148.8 ORF53373 - 0.013 15.3 0.6 0.016 15.0 0.6 1.1 1 0 0 1 1 1 0 Tandem tudor domain within UHRF1 LodA_N PF17990.1 ORF53373 - 0.028 14.3 0.1 0.038 13.9 0.1 1.2 1 0 0 1 1 1 0 L-Lysine epsilon oxidase N-terminal cNMP_binding PF00027.29 ORF52139 - 0.001 19.1 0.0 0.0036 17.3 0.0 1.8 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain RelA_SpoT PF04607.17 ORF52139 - 0.005 17.1 0.3 0.0065 16.7 0.3 1.3 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins Glyco_transf_88 PF16849.5 ORF52139 - 0.014 14.3 0.1 0.015 14.3 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 88 DUF5406 PF17400.2 ORF52139 - 0.063 13.7 0.3 0.07 13.6 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5406) DinI PF06183.13 ORF51894 - 0.11 12.9 0.1 0.21 12.0 0.1 1.4 1 0 0 1 1 1 0 DinI-like family Glyoxalase PF00903.25 ORF51453 - 0.083 13.1 1.0 0.15 12.3 1.0 1.5 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Arf PF00025.21 ORF51279 - 1.5e-38 132.0 0.1 1.6e-38 131.9 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF51279 - 5.7e-15 55.6 0.1 7.4e-15 55.2 0.1 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF51279 - 2.6e-12 46.5 0.0 3.1e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF51279 - 6.2e-11 42.2 0.1 7.5e-11 41.9 0.1 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 ORF51279 - 8e-09 35.2 0.1 9e-09 35.0 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region G-alpha PF00503.20 ORF51279 - 2.3e-08 33.6 0.1 0.00011 21.5 0.0 2.0 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 ORF51279 - 1.1e-06 28.7 0.1 1.5e-06 28.3 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF51279 - 0.0056 16.2 0.3 0.0074 15.8 0.3 1.3 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_24 PF13479.6 ORF51279 - 0.015 15.1 0.0 0.017 14.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF51279 - 0.016 15.8 0.2 0.028 14.9 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF51279 - 0.049 13.7 0.0 0.053 13.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF51279 - 0.1 12.2 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 ORF51279 - 0.11 12.7 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain Pro_CA PF00484.19 ORF51279 - 0.14 12.4 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Carbonic anhydrase Shugoshin_C PF07557.11 ORF50743 - 0.069 13.0 1.2 0.15 11.9 1.2 1.6 1 1 0 1 1 1 0 Shugoshin C terminus LMBR1 PF04791.16 ORF50403 - 1.8 7.4 6.0 1.9 7.3 6.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ycf54 PF10674.9 ORF50403 - 5 7.5 6.8 0.87 9.9 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2488) zf-C2H2_11 PF16622.5 ORF49856 - 0.0077 16.0 3.5 0.028 14.2 3.5 2.0 1 0 0 1 1 1 1 zinc-finger C2H2-type Glutaredoxin PF00462.24 ORF49391 - 1e-11 44.9 0.0 1.4e-11 44.4 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N_2 PF13409.6 ORF49391 - 0.013 15.8 0.0 0.021 15.1 0.0 1.5 1 1 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 ORF49391 - 0.082 13.3 0.0 0.099 13.1 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DUF1184 PF06683.11 ORF49353 - 0.039 13.5 1.8 0.044 13.3 1.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1184) Bro-N PF02498.17 ORF49353 - 0.2 12.4 4.6 0.37 11.5 4.1 1.7 1 1 1 2 2 2 0 BRO family, N-terminal domain Lipoprotein_2 PF00921.17 ORF49353 - 0.21 11.1 8.3 0.24 10.9 8.3 1.1 1 0 0 1 1 1 0 Borrelia lipoprotein LsmAD PF06741.13 ORF49353 - 0.27 11.8 5.5 0.082 13.5 2.3 1.8 2 0 0 2 2 2 0 LsmAD domain PCDO_beta_N PF12391.8 ORF49046 - 0.19 11.3 0.3 0.19 11.3 0.3 2.6 3 0 0 3 3 3 0 Protocatechuate 3,4-dioxygenase beta subunit N terminal Albumin_I PF08027.11 ORF48495 - 0.023 14.3 0.2 5.3 6.7 0.0 2.5 2 0 0 2 2 2 0 Albumin I chain b START PF01852.19 ORF48462 - 5.5e-14 52.1 0.0 5.6e-14 52.0 0.0 1.0 1 0 0 1 1 1 1 START domain NeuB PF03102.14 ORF4798 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 NeuB family DUF5470 PF17564.2 ORF45395 - 0.65 10.2 11.3 0.46 10.7 5.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5470) Yippee-Mis18 PF03226.14 ORF45306 - 4.6e-14 52.5 2.5 6e-14 52.1 2.5 1.1 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly RIG-I_C-RD PF11648.8 ORF45306 - 0.009 16.2 1.2 0.012 15.8 1.2 1.3 1 0 0 1 1 1 1 C-terminal domain of RIG-I EutK_C PF16365.5 ORF44831 - 0.014 15.4 0.3 0.029 14.4 0.0 1.6 2 0 0 2 2 2 0 Ethanolamine utilization protein EutK C-terminus YjbE PF11106.8 ORF44755 - 0.08 13.2 3.6 0.11 12.7 3.6 1.3 1 0 0 1 1 1 0 Exopolysaccharide production protein YjbE DOT1 PF08123.13 ORF44080 - 2.6e-05 23.9 0.1 3.1e-05 23.6 0.1 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 DUF1132 PF06575.12 ORF43604 - 0.029 14.7 0.4 0.043 14.2 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1132) Imp-YgjV PF10688.9 ORF43493 - 0.022 14.6 0.3 0.028 14.3 0.3 1.2 1 0 0 1 1 1 0 Bacterial inner membrane protein TMEM107 PF14995.6 ORF43422 - 0.012 16.1 1.0 0.013 15.9 1.0 1.2 1 0 0 1 1 1 0 Transmembrane protein DUF3267 PF11667.8 ORF43422 - 0.034 14.4 2.7 0.055 13.8 2.7 1.4 1 1 0 1 1 1 0 Putative zincin peptidase AKAP95 PF04988.12 ORF43235 - 0.067 13.4 0.6 0.095 12.9 0.6 1.3 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) zf-RanBP PF00641.18 ORF43235 - 3.2 7.2 9.3 0.17 11.2 2.1 2.5 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others Ribosomal_S17e PF00833.18 ORF43109 - 0.072 13.0 0.0 0.096 12.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal S17 Oxidored_q6 PF01058.22 ORF42916 - 0.019 14.8 0.1 0.034 14.0 0.1 1.3 1 1 0 1 1 1 0 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1400 PF07176.11 ORF42916 - 0.039 14.3 0.1 0.044 14.1 0.1 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1400) Tyr-DNA_phospho PF06087.12 ORF42710 - 6.9e-13 48.3 0.1 2.1e-12 46.7 0.1 1.6 1 1 0 1 1 1 1 Tyrosyl-DNA phosphodiesterase PLDc_2 PF13091.6 ORF42710 - 0.00016 21.6 0.1 0.00019 21.3 0.1 1.1 1 0 0 1 1 1 1 PLD-like domain Rep_trans PF02486.19 ORF42710 - 0.071 12.8 0.4 1.7 8.3 0.4 2.1 1 1 0 1 1 1 0 Replication initiation factor PLDc PF00614.22 ORF42710 - 0.092 13.0 2.9 0.35 11.1 2.9 1.9 1 1 0 1 1 1 0 Phospholipase D Active site motif Pro_isomerase PF00160.21 ORF40722 - 7.9e-27 94.5 0.0 8.8e-27 94.3 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IF2_assoc PF08364.11 ORF40535 - 0.12 12.7 2.0 0.16 12.3 1.9 1.5 1 1 0 1 1 1 0 Bacterial translation initiation factor IF-2 associated region Syntaxin PF00804.25 ORF4042 - 0.22 11.2 6.1 0.25 11.0 6.1 1.1 1 0 0 1 1 1 0 Syntaxin CENP-H PF05837.12 ORF4042 - 0.24 11.8 5.6 0.3 11.5 5.6 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) TMPIT PF07851.13 ORF4042 - 0.94 8.7 4.5 1.1 8.5 4.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein Aconitase_C PF00694.19 ORF39640 - 0.11 12.9 1.2 0.14 12.5 1.2 1.2 1 0 0 1 1 1 0 Aconitase C-terminal domain HicB-like_2 PF15970.5 ORF39640 - 0.2 11.9 6.1 0.08 13.1 3.9 1.4 1 1 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system RNase_H2_suC PF08615.11 ORF39640 - 0.26 11.4 6.1 0.29 11.3 6.1 1.2 1 0 0 1 1 1 0 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) FYDLN_acid PF09538.10 ORF39640 - 6.8 7.4 15.1 9.9 6.9 15.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) PTPRCAP PF15713.5 ORF39640 - 7.6 6.8 15.1 10 6.4 15.1 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated 14-3-3 PF00244.20 ORF37588 - 4.4e-24 85.2 0.8 4.9e-24 85.1 0.8 1.0 1 0 0 1 1 1 1 14-3-3 protein BRCA-2_OB3 PF09104.10 ORF37588 - 0.00086 19.0 0.4 0.0022 17.7 0.2 1.6 1 1 0 2 2 2 1 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 CRISPR_Cas2 PF09827.9 ORF37588 - 0.013 15.6 0.1 2.8 8.2 0.0 2.2 2 0 0 2 2 2 0 CRISPR associated protein Cas2 DUF2207 PF09972.9 ORF37588 - 0.071 11.9 0.3 0.078 11.7 0.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PsbN PF02468.15 ORF37065 - 9.7e-14 51.0 2.9 9.8e-14 50.9 0.2 2.1 2 0 0 2 2 2 1 Photosystem II reaction centre N protein (psbN) ETRAMP PF09716.10 ORF36824 - 0.004 17.2 0.1 0.004 17.2 0.1 1.1 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Herpes_LMP1 PF05297.11 ORF36746 - 0.43 9.7 2.8 0.49 9.5 2.8 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF4404 PF14357.6 ORF35846 - 0.022 15.4 4.8 0.031 14.9 1.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) Wbp11 PF09429.10 ORF35846 - 0.18 12.2 2.6 0.39 11.1 0.3 2.3 2 1 0 2 2 2 0 WW domain binding protein 11 GP24_25 PF17388.2 ORF35846 - 8 6.5 8.6 0.35 10.8 1.4 2.1 1 1 0 2 2 2 0 Tail assembly gene products 24 & 25 Dockerin_1 PF00404.18 ORF3562 - 0.00019 21.5 1.1 0.077 13.2 0.0 1.8 1 1 1 2 2 2 2 Dockerin type I domain EF-hand_5 PF13202.6 ORF3562 - 0.0055 16.1 0.1 0.0089 15.5 0.1 1.3 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF3562 - 0.0057 16.1 0.1 0.015 14.8 0.0 1.7 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF3562 - 0.0086 16.5 0.0 0.017 15.6 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF3562 - 0.03 14.2 0.0 0.061 13.2 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF3562 - 0.037 14.0 0.1 0.08 12.9 0.1 1.5 1 0 0 1 1 1 0 EF-hand domain DUF2018 PF09442.10 ORF3562 - 0.062 14.3 0.1 0.13 13.3 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF2018) ABATE PF07336.11 ORF3507 - 0.097 13.3 1.5 0.12 13.0 1.5 1.1 1 0 0 1 1 1 0 Putative stress-induced transcription regulator PRODH PF18327.1 ORF3507 - 0.11 12.7 1.4 0.71 10.1 0.1 2.4 3 0 0 3 3 3 0 Proline utilization A proline dehydrogenase N-terminal domain TFIIS_C PF01096.18 ORF35062 - 2.3e-21 75.4 6.1 2.3e-21 75.4 6.1 2.9 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 ORF35062 - 4.6e-09 36.0 0.2 4.6e-09 36.0 0.2 3.1 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.7 ORF35062 - 0.00014 21.8 11.7 0.011 15.6 4.7 2.4 2 0 0 2 2 2 2 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 ORF35062 - 0.0098 15.4 0.1 0.0098 15.4 0.1 2.8 2 2 0 2 2 2 1 TFIIB zinc-binding zf-ribbon_3 PF13248.6 ORF35062 - 0.019 14.3 9.3 8.3 6.0 0.0 3.9 4 0 0 4 4 4 0 zinc-ribbon domain zf-DNA_Pol PF08996.10 ORF35062 - 0.034 13.9 3.1 0.043 13.6 1.3 1.8 2 0 0 2 2 2 0 DNA Polymerase alpha zinc finger PhnA_Zn_Ribbon PF08274.12 ORF35062 - 0.048 13.6 1.5 0.048 13.6 1.5 2.7 3 0 0 3 3 3 0 PhnA Zinc-Ribbon Baculo_LEF5_C PF11792.8 ORF35062 - 0.065 12.9 0.9 0.065 12.9 0.9 1.9 2 1 0 2 2 1 0 Baculoviridae late expression factor 5 C-terminal domain zf-TFIIB PF13453.6 ORF35062 - 0.072 12.4 11.4 0.36 10.2 0.6 2.9 2 1 0 2 2 2 0 Transcription factor zinc-finger Nudix_N_2 PF14803.6 ORF35062 - 0.075 13.0 10.9 2.6 8.0 1.4 3.6 3 1 0 3 3 3 0 Nudix N-terminal Rubredoxin PF00301.20 ORF35062 - 0.16 12.1 13.3 2.5 8.2 0.1 4.0 4 0 0 4 4 4 0 Rubredoxin zinc_ribbon_13 PF09855.9 ORF35062 - 0.49 10.6 4.8 53 4.1 3.4 3.2 2 1 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) HypA PF01155.19 ORF35062 - 0.67 10.0 9.6 0.26 11.3 0.7 2.8 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 ORF35062 - 0.78 9.9 17.4 1.9 8.7 0.6 4.5 4 1 1 5 5 5 0 Zinc ribbon domain DZR PF12773.7 ORF35062 - 1.5 8.9 15.2 3.7 7.7 1.0 2.6 2 2 0 2 2 2 0 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF35062 - 2.7 8.8 12.9 55 4.6 8.9 3.0 1 1 1 2 2 2 0 zinc-ribbon family zinc_ribbon_4 PF13717.6 ORF35062 - 3 7.8 19.0 2.3 8.2 0.4 3.9 4 0 0 4 4 4 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 ORF35062 - 6.2 6.8 9.4 20 5.2 0.1 2.8 2 1 0 2 2 2 0 Putative transposase DNA-binding domain Terminase_GpA PF05876.12 ORF35062 - 7.1 5.1 8.8 3 6.3 5.9 1.7 2 0 0 2 2 2 0 Phage terminase large subunit (GpA) DUF3797 PF12677.7 ORF35062 - 7.8 6.5 9.0 65 3.5 0.0 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF3797) UxaC PF02614.14 ORF34384 - 6.4e-57 193.4 0.8 7.1e-57 193.3 0.8 1.0 1 0 0 1 1 1 1 Glucuronate isomerase BT1 PF03092.16 ORF34384 - 0.064 11.5 0.0 0.073 11.3 0.0 1.0 1 0 0 1 1 1 0 BT1 family Microtub_bd PF16796.5 ORF3407 - 0.0021 18.0 0.0 0.0037 17.2 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding Aa_trans PF01490.18 ORF33853 - 0.0011 17.8 5.2 0.0013 17.5 5.2 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Peptidase_U4 PF03419.13 ORF33853 - 0.088 12.1 0.6 0.096 12.0 0.6 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Dpy-30 PF05186.13 ORF33801 - 0.0077 15.9 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Dpy-30 motif DivIC PF04977.15 ORF33801 - 0.01 15.6 0.3 0.018 14.8 0.3 1.4 1 0 0 1 1 1 0 Septum formation initiator WHEP-TRS PF00458.20 ORF33801 - 0.038 14.1 0.2 0.054 13.7 0.2 1.3 1 0 0 1 1 1 0 WHEP-TRS domain Osmo_CC PF08946.10 ORF33801 - 0.49 10.7 3.1 0.26 11.6 1.0 1.6 2 0 0 2 2 2 0 Osmosensory transporter coiled coil Bac_DNA_binding PF00216.21 ORF33734 - 7e-12 45.4 2.1 8.9e-12 45.1 2.1 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein hnRNP_Q_AcD PF18360.1 ORF33734 - 0.068 13.1 0.0 0.12 12.3 0.0 1.5 1 1 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain IBN_N PF03810.19 ORF33413 - 1.6e-05 24.7 0.0 2.5e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Importin-beta N-terminal domain HTH_10 PF04967.12 ORF3327 - 0.13 12.1 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain Tetrabrachion PF11401.8 ORF3319 - 0.041 13.9 0.5 0.12 12.4 0.5 1.7 1 0 0 1 1 1 0 Tetrabrachion START PF01852.19 ORF33091 - 5.5e-14 52.1 0.0 5.6e-14 52.0 0.0 1.0 1 0 0 1 1 1 1 START domain DDE_Tnp_IS66_C PF13817.6 ORF32656 - 0.017 15.3 0.0 0.032 14.4 0.0 1.4 1 0 0 1 1 1 0 IS66 C-terminal element DHHC PF01529.20 ORF32656 - 2.5 8.2 6.7 3.2 7.9 6.7 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Herpes_LMP1 PF05297.11 ORF32656 - 8 5.5 7.7 9.7 5.3 7.7 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF4131 PF13567.6 ORF32376 - 0.026 14.2 2.4 0.036 13.7 2.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) CxxCxxCC PF03692.15 ORF32031 - 1.4e-12 48.1 6.6 1.6e-12 47.9 6.6 1.1 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain SufE PF02657.15 ORF31678 - 4.3e-31 107.3 0.0 4.8e-31 107.2 0.0 1.0 1 0 0 1 1 1 1 Fe-S metabolism associated domain ORF_2_N PF18492.1 ORF31678 - 0.13 12.4 1.9 0.13 12.5 1.1 1.4 2 0 0 2 2 2 0 Open reading frame 2 N-terminal domain DUF1287 PF06940.11 ORF31625 - 2.5e-42 144.3 0.0 2.8e-42 144.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1287) CHAP PF05257.16 ORF31625 - 0.0059 17.2 0.0 0.008 16.7 0.0 1.3 1 0 0 1 1 1 1 CHAP domain Amidase_6 PF12671.7 ORF31625 - 0.0065 16.6 0.1 0.0067 16.6 0.1 1.1 1 0 0 1 1 1 1 Putative amidase domain Pox_I6 PF04595.13 ORF31548 - 0.023 13.7 0.1 0.03 13.3 0.1 1.1 1 0 0 1 1 1 0 Poxvirus I6-like family PP2C PF00481.21 ORF30851 - 3.9e-09 36.5 0.0 4.4e-09 36.4 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF30851 - 0.0026 17.7 0.0 0.0028 17.6 0.0 1.2 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) EF-hand_1 PF00036.32 ORF30329 - 1.7e-13 49.0 2.1 1.8e-07 30.2 0.4 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF30329 - 2.2e-12 45.8 0.9 5e-07 29.1 0.4 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF30329 - 4.1e-11 41.8 2.9 4e-06 26.1 0.4 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF30329 - 1.9e-10 41.1 1.0 2.8e-10 40.5 1.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF30329 - 0.00021 21.1 1.2 0.0012 18.6 0.6 2.5 2 1 1 3 3 3 1 EF-hand domain pair MNE1 PF13762.6 ORF30329 - 0.0017 18.4 0.1 0.0019 18.2 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial splicing apparatus component DIX PF00778.17 ORF30329 - 0.11 12.3 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 DIX domain EF-hand_10 PF14788.6 ORF30329 - 0.2 11.5 1.7 0.32 10.9 0.1 2.1 2 1 1 3 3 3 0 EF hand DUF2516 PF10724.9 ORF29834 - 0.0029 17.9 0.7 0.29 11.5 0.4 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF2516) Phageshock_PspG PF09583.10 ORF29834 - 0.15 12.3 3.4 0.27 11.5 3.4 1.4 1 0 0 1 1 1 0 Phage shock protein G (Phageshock_PspG) 14-3-3 PF00244.20 ORF29610 - 0.017 14.7 0.0 0.023 14.2 0.0 1.1 1 0 0 1 1 1 0 14-3-3 protein RCC1_2 PF13540.6 ORF29494 - 7.3e-06 25.6 4.9 0.11 12.4 0.1 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 ORF29494 - 0.98 9.5 10.2 4.5 7.4 0.7 3.0 3 0 0 3 3 3 0 PheRS DNA binding domain 2 DOT1 PF08123.13 ORF27011 - 2.6e-05 23.9 0.1 3.1e-05 23.6 0.1 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 Peptidase_S10 PF00450.22 ORF26948 - 7e-14 52.1 0.0 7.4e-14 52.0 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Tetrabrachion PF11401.8 ORF26197 - 0.041 13.9 0.5 0.12 12.4 0.5 1.7 1 0 0 1 1 1 0 Tetrabrachion p450 PF00067.22 ORF25357 - 5.1e-18 65.1 0.0 5.3e-18 65.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Dopey_N PF04118.14 ORF2493 - 0.085 12.0 3.3 0.095 11.8 3.3 1.1 1 0 0 1 1 1 0 Dopey, N-terminal peroxidase PF00141.23 ORF23891 - 0.11 12.2 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Peroxidase Calici_coat_C PF08435.11 ORF22871 - 0.12 11.8 0.2 0.14 11.6 0.2 1.1 1 0 0 1 1 1 0 Calicivirus coat protein C-terminal Roc PF08477.13 ORF22728 - 1.3e-10 41.5 0.4 1.5e-09 38.1 0.4 2.0 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF22728 - 1.8e-07 30.9 1.0 9e-07 28.6 1.0 1.8 1 1 0 1 1 1 1 Ras family MMR_HSR1 PF01926.23 ORF22728 - 0.0057 16.7 0.1 0.0083 16.2 0.1 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase TniB PF05621.11 ORF22728 - 0.0074 15.7 0.0 0.018 14.4 0.0 1.6 1 1 1 2 2 2 1 Bacterial TniB protein PI3K_p85B PF02192.16 ORF22728 - 0.021 14.5 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 PI3-kinase family, p85-binding domain TMEM107 PF14995.6 ORF22260 - 0.02 15.3 0.4 0.023 15.2 0.4 1.2 1 0 0 1 1 1 0 Transmembrane protein TcpE PF12648.7 ORF22260 - 0.047 14.2 1.0 0.05 14.1 1.0 1.1 1 0 0 1 1 1 0 TcpE family DUF1945 PF09178.10 ORF22260 - 0.1 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1945) Aa_trans PF01490.18 ORF21268 - 0.0011 17.8 5.2 0.0013 17.5 5.2 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Peptidase_U4 PF03419.13 ORF21268 - 0.088 12.1 0.6 0.096 12.0 0.6 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA DUF4768 PF15989.5 ORF19058 - 0.076 13.0 0.0 14 5.7 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4768) YjbE PF11106.8 ORF18419 - 0.08 13.2 3.6 0.11 12.7 3.6 1.3 1 0 0 1 1 1 0 Exopolysaccharide production protein YjbE TNFR_c6 PF00020.18 ORF18269 - 6.9 7.2 9.5 7.5 7.0 7.7 2.1 2 1 0 2 2 2 0 TNFR/NGFR cysteine-rich region Mito_carr PF00153.27 ORF18095 - 1.4e-16 60.1 0.3 7.4e-11 41.8 0.1 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein SIS_2 PF13580.6 ORF17059 - 0.058 13.4 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 SIS domain Radial_spoke_3 PF06098.11 ORF17059 - 2 7.6 9.1 2.3 7.4 9.1 1.2 1 0 0 1 1 1 0 Radial spoke protein 3 DUF3395 PF11875.8 ORF17059 - 3.8 7.4 6.7 5.4 6.9 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3395) Mito_carr PF00153.27 ORF163 - 5.2e-22 77.6 0.1 7.8e-22 77.0 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF1072 PF06380.11 ORF163 - 0.075 12.9 0.5 0.11 12.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) PCDO_beta_N PF12391.8 ORF15903 - 0.19 11.3 0.3 0.19 11.3 0.3 2.6 3 0 0 3 3 3 0 Protocatechuate 3,4-dioxygenase beta subunit N terminal TetR_C_23 PF17931.1 ORF15901 - 0.11 12.6 2.6 0.16 12.1 2.6 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CSRNP_N PF16019.5 ORF15901 - 0.72 9.7 7.0 0.81 9.6 7.0 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus ALMT PF11744.8 ORF15901 - 2.8 6.7 7.3 3 6.6 7.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Presenilin PF01080.17 ORF15901 - 8.5 5.0 6.1 9.8 4.8 6.1 1.0 1 0 0 1 1 1 0 Presenilin DUF4692 PF15763.5 ORF15785 - 0.12 12.9 1.0 0.19 12.2 1.0 1.4 1 1 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) DUF1658 PF07871.11 ORF1494 - 0.023 14.6 1.7 0.028 14.3 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) Acetyltransf_10 PF13673.7 ORF14696 - 3.2e-12 46.5 0.0 3.7e-12 46.3 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF14696 - 3.9e-11 43.2 0.0 4.5e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF14696 - 5.9e-10 39.4 0.0 7.6e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF14696 - 2.2e-08 33.9 0.0 5.2e-08 32.8 0.0 1.5 1 1 1 2 2 2 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF14696 - 0.1 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF14696 - 0.12 12.5 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF14696 - 0.14 12.8 0.0 0.17 12.6 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain EMP70 PF02990.16 ORF13751 - 3.6 6.2 9.2 2.2 6.9 4.1 2.0 2 0 0 2 2 2 0 Endomembrane protein 70 EF-hand_1 PF00036.32 ORF12576 - 5e-24 82.0 6.4 1.5e-08 33.6 0.4 3.4 3 1 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF12576 - 1.8e-22 77.3 6.1 2.3e-06 27.1 0.1 3.3 3 1 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF12576 - 4.6e-21 75.0 2.6 2e-15 57.0 1.2 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF12576 - 1.3e-20 71.9 9.9 3.9e-06 26.1 0.3 3.6 3 1 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF12576 - 5.2e-16 58.2 4.6 9.1e-12 44.6 0.5 3.0 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF12576 - 2.5e-07 30.9 0.0 1.9e-05 24.9 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_10 PF14788.6 ORF12576 - 3.1e-05 23.7 0.1 0.00051 19.9 0.0 2.4 1 1 1 2 2 2 1 EF hand SPARC_Ca_bdg PF10591.9 ORF12576 - 0.00023 21.5 0.1 0.037 14.3 0.0 2.1 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF12576 - 0.0019 18.1 0.4 0.017 15.0 0.3 2.1 1 1 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand TerB PF05099.13 ORF12576 - 0.0067 16.4 0.1 0.019 14.9 0.0 1.7 1 1 1 2 2 2 1 Tellurite resistance protein TerB Caleosin PF05042.13 ORF12576 - 0.022 14.7 0.1 5.7 6.8 0.0 2.9 1 1 2 3 3 3 0 Caleosin related protein Dockerin_1 PF00404.18 ORF12576 - 0.025 14.8 0.1 0.14 12.3 0.0 2.2 3 0 0 3 3 3 0 Dockerin type I domain p25-alpha PF05517.12 ORF12576 - 0.078 13.1 0.1 0.11 12.7 0.1 1.4 1 1 0 1 1 1 0 p25-alpha EFhand_Ca_insen PF08726.10 ORF12576 - 0.094 12.8 0.4 0.21 11.7 0.1 1.8 2 0 0 2 2 2 0 Ca2+ insensitive EF hand Rab15_effector PF15208.6 ORF12098 - 0.031 13.6 0.2 0.04 13.2 0.2 1.2 1 0 0 1 1 1 0 Rab15 effector 4F5 PF04419.14 ORF11726 - 9.4e-07 29.6 8.6 9.4e-07 29.6 8.6 3.7 4 0 0 4 4 4 1 4F5 protein family PRODH PF18327.1 ORF11386 - 0.068 13.4 1.3 0.71 10.1 0.1 2.6 3 0 0 3 3 3 0 Proline utilization A proline dehydrogenase N-terminal domain ABATE PF07336.11 ORF11386 - 0.096 13.4 1.5 0.12 13.0 1.5 1.1 1 0 0 1 1 1 0 Putative stress-induced transcription regulator PEGSRP PF07623.11 ORF112505 - 0.81 9.6 6.1 0.14 12.0 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) Alpha_GJ PF03229.13 ORF111741 - 0.025 15.2 5.2 0.031 14.8 5.2 1.1 1 0 0 1 1 1 0 Alphavirus glycoprotein J Ricin_B_lectin PF00652.22 ORF11174 - 0.039 14.2 0.1 0.05 13.9 0.1 1.1 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin domain TPR_12 PF13424.6 ORF111371 - 1.5e-28 98.9 2.8 7.5e-18 64.6 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF111371 - 2.3e-22 78.1 1.3 5.8e-12 45.1 0.1 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF111371 - 3.7e-13 48.5 0.6 0.00023 21.1 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF111371 - 6.1e-12 44.7 1.3 2.9e-05 23.8 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF111371 - 4.8e-11 42.5 1.8 0.0022 18.7 0.0 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF111371 - 1.6e-10 41.4 0.4 8.4e-07 29.4 0.0 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF111371 - 3.8e-10 39.1 0.5 0.00011 21.9 0.0 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF111371 - 2.1e-09 36.8 2.4 0.001 19.0 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF111371 - 1e-08 34.9 0.0 0.022 15.4 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF111371 - 1.9e-07 31.6 0.2 1.1e-05 26.0 0.0 2.8 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF111371 - 4.5e-07 29.6 0.4 5.3e-07 29.3 0.4 1.0 1 0 0 1 1 1 1 MalT-like TPR region TPR_17 PF13431.6 ORF111371 - 1.2e-06 28.5 2.4 0.17 12.3 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_5 PF12688.7 ORF111371 - 0.00023 21.4 0.5 0.00044 20.5 0.5 1.4 1 1 0 1 1 1 1 Tetratrico peptide repeat TPR_6 PF13174.6 ORF111371 - 0.00049 20.6 3.7 0.85 10.4 0.2 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_3 PF07720.12 ORF111371 - 0.022 14.7 0.0 1.3 9.1 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF111371 - 0.022 14.9 0.0 0.12 12.6 0.0 2.1 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 PPR_1 PF12854.7 ORF111371 - 0.03 14.0 0.0 0.62 9.8 0.0 2.4 2 0 0 2 2 2 0 PPR repeat PPR PF01535.20 ORF111371 - 0.031 14.5 0.1 4.2 7.8 0.0 2.7 2 0 0 2 2 2 0 PPR repeat RPN6_N PF18055.1 ORF111371 - 0.046 14.1 0.1 0.058 13.8 0.1 1.3 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN6 N-terminal domain FOP_dimer PF09398.10 ORF110905 - 3.3e-12 46.5 0.0 5.2e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF110905 - 1.6e-07 30.2 0.1 2.9e-07 29.4 0.1 1.4 1 0 0 1 1 1 1 LisH COX4_pro PF03626.14 ORF109160 - 5.3e-19 68.4 15.0 6.8e-19 68.1 15.0 1.1 1 0 0 1 1 1 1 Prokaryotic Cytochrome C oxidase subunit IV MtrF PF09472.10 ORF109160 - 0.19 11.2 0.1 0.19 11.2 0.1 2.5 3 0 0 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) ESSS PF10183.9 ORF109160 - 0.24 11.6 1.9 0.2 11.9 0.4 1.6 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) DUF1218 PF06749.12 ORF109160 - 0.25 11.9 13.0 0.98 10.0 4.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1218) DUF3810 PF12725.7 ORF109160 - 1.1 8.5 8.4 1.5 8.1 8.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) DUF3169 PF11368.8 ORF109160 - 2 7.9 13.8 1.2 8.5 5.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) Presenilin PF01080.17 ORF109160 - 2.3 6.9 12.8 2.3 6.9 12.8 1.0 1 0 0 1 1 1 0 Presenilin VPS13_C PF16909.5 ORF10892 - 9.5e-06 25.5 0.9 1.2e-05 25.2 0.9 1.1 1 0 0 1 1 1 1 Vacuolar-sorting-associated 13 protein C-terminal JmjN PF02375.17 ORF108803 - 9.3e-09 35.1 0.6 1.6e-08 34.3 0.6 1.4 1 0 0 1 1 1 1 jmjN domain TFIIIC_delta PF12657.7 ORF108637 - 0.0026 17.7 0.1 0.0029 17.6 0.1 1.1 1 0 0 1 1 1 1 Transcription factor IIIC subunit delta N-term POPLD PF08170.12 ORF108145 - 0.079 13.3 0.1 0.21 12.0 0.0 1.6 1 1 1 2 2 2 0 POPLD (NUC188) domain CDC50 PF03381.15 ORF106155 - 2.6e-16 60.0 0.7 3.2e-16 59.7 0.7 1.1 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Dynein_light PF01221.18 ORF105404 - 1.1e-20 73.7 0.6 1.5e-20 73.3 0.6 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 MBOAT PF03062.19 ORF105393 - 0.00028 20.3 5.1 0.00028 20.3 5.1 1.7 1 1 1 2 2 2 1 MBOAT, membrane-bound O-acyltransferase family CHD5 PF04420.14 ORF105393 - 5.5 6.8 7.0 0.39 10.6 2.3 1.4 2 0 0 2 2 2 0 CHD5-like protein Diphthamide_syn PF01866.17 ORF105048 - 0.004 16.6 0.0 0.0089 15.5 0.0 1.5 2 0 0 2 2 2 1 Putative diphthamide synthesis protein zf-CDGSH PF09360.10 ORF105010 - 0.39 11.0 3.4 0.93 9.8 0.1 2.3 1 1 1 2 2 2 0 Iron-binding zinc finger CDGSH type Ribosomal_S19e PF01090.19 ORF104941 - 4.2e-35 120.4 0.0 4.7e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e LINES_C PF14695.6 ORF10458 - 0.22 11.0 1.0 0.3 10.5 1.0 1.3 1 0 0 1 1 1 0 Lines C-terminus DUF5622 PF18533.1 ORF104406 - 0.075 13.2 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5622) NAD_binding_7 PF13241.6 ORF104406 - 0.1 13.0 0.0 0.13 12.8 0.0 1.1 1 0 0 1 1 1 0 Putative NAD(P)-binding FERM_N PF09379.10 ORF103378 - 0.0042 17.0 0.1 0.006 16.5 0.1 1.3 1 0 0 1 1 1 1 FERM N-terminal domain AAA PF00004.29 ORF103378 - 0.066 13.6 0.2 0.075 13.5 0.2 1.1 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Elong_Iki1 PF10483.9 ORF103378 - 0.068 12.7 0.5 0.076 12.5 0.5 1.2 1 0 0 1 1 1 0 Elongator subunit Iki1 Tyr-DNA_phospho PF06087.12 ORF103312 - 6.9e-13 48.3 0.1 2.1e-12 46.7 0.1 1.6 1 1 0 1 1 1 1 Tyrosyl-DNA phosphodiesterase PLDc_2 PF13091.6 ORF103312 - 0.00016 21.6 0.1 0.00019 21.3 0.1 1.1 1 0 0 1 1 1 1 PLD-like domain Rep_trans PF02486.19 ORF103312 - 0.071 12.8 0.4 1.7 8.3 0.4 2.1 1 1 0 1 1 1 0 Replication initiation factor PLDc PF00614.22 ORF103312 - 0.092 13.0 2.9 0.35 11.1 2.9 1.9 1 1 0 1 1 1 0 Phospholipase D Active site motif DAHP_synth_1 PF00793.20 ORF103108 - 1.9e-14 53.2 0.0 2.3e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 DAHP synthetase I family Mito_carr PF00153.27 ORF103103 - 2.4e-17 62.6 0.5 3e-17 62.3 0.5 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF4538 PF15061.6 ORF103103 - 0.04 13.6 0.0 0.063 13.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) SPOB_ab PF14682.6 ORF102912 - 0.017 15.2 0.3 0.027 14.5 0.3 1.3 1 0 0 1 1 1 0 Sporulation initiation phospho-transferase B, C-terminal BCDHK_Adom3 PF10436.9 ORF102912 - 0.018 14.8 0.5 0.021 14.6 0.5 1.1 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase DUF4389 PF14333.6 ORF101758 - 0.21 11.5 2.1 0.37 10.8 1.6 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) DUF148 PF02520.17 ORF101391 - 0.027 14.6 0.5 0.037 14.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF148 Alpha_adaptinC2 PF02883.20 ORF101128 - 0.12 12.7 0.0 9 6.7 0.0 2.1 1 1 0 2 2 2 0 Adaptin C-terminal domain PRODH PF18327.1 ORF100986 - 0.068 13.4 1.3 0.71 10.1 0.1 2.6 3 0 0 3 3 3 0 Proline utilization A proline dehydrogenase N-terminal domain ABATE PF07336.11 ORF100986 - 0.096 13.4 1.5 0.12 13.0 1.5 1.1 1 0 0 1 1 1 0 Putative stress-induced transcription regulator ZapA PF05164.13 ORF100771 - 5e-20 71.7 1.5 6.5e-20 71.4 1.5 1.1 1 0 0 1 1 1 1 Cell division protein ZapA DUF3482 PF11981.8 ORF100771 - 0.0015 18.0 5.1 0.0018 17.7 5.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) Bac_rhamnosid6H PF17389.2 ORF100771 - 0.024 13.9 0.3 0.027 13.7 0.3 1.0 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain PEP-utilisers_N PF05524.13 ORF100771 - 0.076 13.2 3.1 0.13 12.4 3.1 1.4 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal DUF2205 PF10224.9 ORF100771 - 0.13 12.3 3.5 1.5 8.9 0.1 2.2 2 0 0 2 2 2 0 Short coiled-coil protein DUF5320 PF17253.2 ORF100771 - 0.73 10.9 3.9 13 7.0 0.2 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5320) Corona_NS1 PF06145.11 ORF100396 - 0.076 12.5 0.6 0.15 11.6 0.6 1.5 1 0 0 1 1 1 0 Coronavirus nonstructural protein NS1 TMEMspv1-c74-12 PF11044.8 NODE_54354_length_322_cov_1.299652_g46423_i0forward_frame_1 - 2 8.4 0.0 2 8.4 0.0 2.7 3 0 0 3 3 3 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Ribosomal_L32p PF01783.23 NODE_54338_length_322_cov_1.888502_g46407_i0reverse_frame_1 - 0.09 13.1 0.2 0.18 12.1 0.2 1.5 1 0 0 1 1 1 0 Ribosomal L32p protein family DUF4083 PF13314.6 NODE_54336_length_322_cov_1.923345_g46405_i0reverse_frame_1 - 0.026 14.5 1.1 0.044 13.7 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Myc_target_1 PF15179.6 NODE_54336_length_322_cov_1.923345_g46405_i0reverse_frame_1 - 0.058 13.3 0.3 0.068 13.1 0.3 1.0 1 0 0 1 1 1 0 Myc target protein 1 DUF2681 PF10883.8 NODE_54336_length_322_cov_1.923345_g46405_i0reverse_frame_1 - 0.081 13.3 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) ssDBP_DBD PF18361.1 NODE_54332_length_322_cov_2.000000_g46401_i0reverse_frame_1 - 0.046 13.8 0.1 0.13 12.3 0.0 1.7 1 1 1 2 2 2 0 Single stranded DNA-binding protein ss DNA binding domain Phage_integrase PF00589.22 NODE_54331_length_322_cov_2.041812_g46400_i0reverse_frame_1 - 0.031 14.1 0.0 0.034 14.0 0.0 1.1 1 0 0 1 1 1 0 Phage integrase family Clat_adaptor_s PF01217.20 NODE_54327_length_322_cov_2.226481_g46396_i0forward_frame_1 - 0.13 12.2 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Clathrin adaptor complex small chain PIG-F PF06699.11 NODE_54313_length_322_cov_2.599303_g46382_i0reverse_frame_1 - 0.035 14.3 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F MIF4G_like_2 PF09090.11 NODE_54313_length_322_cov_2.599303_g46382_i0reverse_frame_1 - 0.095 12.2 0.3 0.096 12.1 0.3 1.1 1 0 0 1 1 1 0 MIF4G like AAA_PrkA PF08298.11 NODE_54310_length_322_cov_2.766551_g46379_i0reverse_frame_1 - 3.1e-46 157.9 0.1 3.4e-46 157.8 0.1 1.0 1 0 0 1 1 1 1 PrkA AAA domain Catalase-rel PF06628.12 NODE_54305_length_322_cov_3.121951_g46374_i0forward_frame_1 - 3.1e-15 56.1 0.0 4.2e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 Catalase-related immune-responsive Lactate_perm PF02652.14 NODE_54303_length_322_cov_3.480836_g46372_i0reverse_frame_1 - 8.1e-47 160.1 11.7 8.9e-47 160.0 11.7 1.0 1 0 0 1 1 1 1 L-lactate permease ETF PF01012.21 NODE_54300_length_322_cov_3.595819_g46369_i0forward_frame_1 - 4.4e-17 62.6 0.3 5e-17 62.4 0.3 1.0 1 0 0 1 1 1 1 Electron transfer flavoprotein domain DUF3362 PF11842.8 NODE_54291_length_322_cov_65.473868_g46360_i0forward_frame_1 - 0.04 14.2 0.6 0.075 13.4 0.2 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF3362) Fer4_22 PF17179.4 NODE_54288_length_322_cov_68.243902_g46357_i0forward_frame_1 - 0.69 10.8 2.7 0.59 11.0 1.1 1.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain TBD PF12845.7 NODE_54282_length_322_cov_81.811847_g46351_i0reverse_frame_1 - 0.026 14.4 0.8 0.075 12.9 0.6 1.8 2 0 0 2 2 2 0 TBD domain dCMP_cyt_deam_1 PF00383.23 NODE_54276_length_322_cov_87.038328_g46345_i0forward_frame_1 - 0.012 15.5 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region Toxin-deaminase PF14424.6 NODE_54276_length_322_cov_87.038328_g46345_i0forward_frame_1 - 0.012 15.7 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 The BURPS668_1122 family of deaminases APOBEC2 PF18772.1 NODE_54276_length_322_cov_87.038328_g46345_i0forward_frame_1 - 0.031 14.3 0.0 0.037 14.1 0.0 1.2 1 0 0 1 1 1 0 APOBEC2 EF-hand_4 PF12763.7 NODE_54276_length_322_cov_87.038328_g46345_i0forward_frame_1 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EF-hand_5 PF13202.6 NODE_54276_length_322_cov_87.038328_g46345_i0forward_frame_1 - 0.15 11.6 0.1 0.26 10.9 0.1 1.3 1 0 0 1 1 1 0 EF hand WRKY PF03106.15 NODE_54275_length_322_cov_87.641115_g46344_i0reverse_frame_1 - 0.34 11.2 5.6 2.7 8.3 5.5 2.2 1 1 0 1 1 1 0 WRKY DNA -binding domain DUF2688 PF10892.8 NODE_54272_length_322_cov_100.069686_g46341_i0reverse_frame_1 - 0.12 11.8 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) DUF2024 PF09630.10 NODE_54268_length_322_cov_121.397213_g46337_i0reverse_frame_1 - 0.16 11.8 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) YwiC PF14256.6 NODE_54257_length_322_cov_209.982578_g46326_i0reverse_frame_1 - 0.1 12.9 0.2 0.14 12.4 0.2 1.1 1 0 0 1 1 1 0 YwiC-like protein SAGA-Tad1 PF12767.7 NODE_54256_length_322_cov_230.975610_g46325_i0reverse_frame_1 - 0.029 14.1 0.3 0.035 13.9 0.3 1.2 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit Colicin_K PF17500.2 NODE_54256_length_322_cov_230.975610_g46325_i0forward_frame_1 - 0.012 16.2 3.5 0.014 15.9 3.5 1.2 1 0 0 1 1 1 0 Colicin-K Fer2 PF00111.27 NODE_54245_length_322_cov_1560.543554_g46314_i0reverse_frame_1 - 3.6e-05 23.6 0.1 3.6e-05 23.6 0.1 1.9 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Ribosomal_L6e_N PF03868.15 NODE_54242_length_322_cov_4357.714286_g46311_i0reverse_frame_1 - 0.0016 18.7 2.7 0.0023 18.1 2.7 1.2 1 0 0 1 1 1 1 Ribosomal protein L6, N-terminal domain DUF3024 PF11225.8 NODE_54234_length_323_cov_1.545139_g46303_i0forward_frame_1 - 0.14 12.4 1.2 0.19 12.0 0.1 1.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3024) FHA PF00498.26 NODE_54232_length_323_cov_1.586806_g46301_i0forward_frame_1 - 8.3e-08 32.5 0.1 1.3e-07 31.9 0.1 1.3 1 1 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_54232_length_323_cov_1.586806_g46301_i0forward_frame_1 - 0.00084 19.6 0.0 0.0014 18.9 0.0 1.4 1 1 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain DUF668 PF05003.12 NODE_54229_length_323_cov_1.656250_g46298_i0reverse_frame_1 - 0.081 13.4 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF668) Trimer_CC PF08954.11 NODE_54228_length_323_cov_1.680556_g46297_i0reverse_frame_1 - 0.76 9.4 2.5 0.38 10.3 0.4 1.6 2 0 0 2 2 2 0 Trimerisation motif Neur_chan_memb PF02932.16 NODE_54227_length_323_cov_1.708333_g46296_i0reverse_frame_1 - 0.25 11.4 0.4 0.3 11.1 0.4 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Neisseria_TspB PF05616.13 NODE_54227_length_323_cov_1.708333_g46296_i0reverse_frame_1 - 0.78 8.1 8.8 0.75 8.2 8.8 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein AAA_5 PF07728.14 NODE_54223_length_323_cov_1.861111_g46292_i0reverse_frame_1 - 0.045 13.7 0.0 0.045 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Mqo PF06039.15 NODE_54221_length_323_cov_1.927083_g46290_i0forward_frame_1 - 0.0075 14.9 0.4 0.0078 14.8 0.4 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) PUFD PF16553.5 NODE_54204_length_323_cov_2.475694_g46273_i0reverse_frame_1 - 0.064 13.4 0.2 0.077 13.1 0.2 1.3 1 0 0 1 1 1 0 BCORL-PCGF1-binding domain Myb_DNA-bind_6 PF13921.6 NODE_54199_length_323_cov_2.670139_g46268_i0reverse_frame_1 - 0.028 14.6 0.2 0.049 13.9 0.2 1.4 1 0 0 1 1 1 0 Myb-like DNA-binding domain TcA_RBD PF18518.1 NODE_54195_length_323_cov_3.736111_g46264_i0reverse_frame_1 - 0.049 13.9 0.9 0.054 13.8 0.9 1.1 1 0 0 1 1 1 0 TcA receptor binding domain Kelch_4 PF13418.6 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 8.9e-12 44.8 1.9 1.9e-06 27.8 0.0 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 2.3e-09 37.0 0.6 0.0019 18.1 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 4.8e-09 36.2 1.1 1.2e-06 28.5 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 2.1e-08 33.6 3.6 7.4e-06 25.5 0.5 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 5.2e-07 29.8 0.9 0.00076 19.7 0.0 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 0.00027 20.8 5.4 0.028 14.4 0.9 2.8 2 1 0 2 2 2 2 Kelch motif SAWADEE PF16719.5 NODE_54189_length_323_cov_4.937500_g46258_i0forward_frame_1 - 0.025 14.6 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 SAWADEE domain DUF648 PF04890.13 NODE_54186_length_323_cov_41.586806_g46255_i0forward_frame_1 - 0.053 13.3 0.1 0.073 12.8 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF648) Syntaxin_2 PF14523.6 NODE_54184_length_323_cov_44.822917_g46253_i0forward_frame_1 - 0.024 15.0 1.7 0.043 14.2 1.6 1.4 1 1 0 1 1 1 0 Syntaxin-like protein PH PF00169.29 NODE_54182_length_323_cov_54.357639_g46251_i0forward_frame_1 - 0.0031 18.0 0.0 0.0043 17.5 0.0 1.3 1 0 0 1 1 1 1 PH domain DUF1279 PF06916.13 NODE_54182_length_323_cov_54.357639_g46251_i0forward_frame_1 - 0.08 13.5 0.0 0.11 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1279) zf-C2H2_7 PF15269.6 NODE_54162_length_323_cov_98.041667_g46231_i0reverse_frame_1 - 0.017 15.2 0.1 0.031 14.4 0.1 1.4 1 0 0 1 1 1 0 Zinc-finger PPR_2 PF13041.6 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 4.1e-14 52.5 0.1 4.1e-11 42.9 0.0 2.0 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 8.9e-10 38.5 0.0 2.3e-06 27.6 0.0 1.7 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 1.2e-09 37.8 0.1 1.1e-05 25.3 0.0 2.1 2 0 0 2 2 2 2 PPR repeat PPR_1 PF12854.7 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 1.5e-06 27.8 3.0 3.9e-05 23.3 0.0 2.9 3 1 0 3 3 3 1 PPR repeat Clathrin PF00637.20 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 0.0012 18.7 0.0 0.86 9.5 0.0 2.1 1 1 0 2 2 2 2 Region in Clathrin and VPS SYCP2_ARLD PF18581.1 NODE_54153_length_323_cov_139.135417_g46222_i0forward_frame_1 - 0.024 14.7 0.1 0.03 14.3 0.1 1.1 1 0 0 1 1 1 0 Synaptonemal complex 2 armadillo-repeat-like domain DUF4710 PF15828.5 NODE_54147_length_323_cov_205.461806_g46216_i0reverse_frame_1 - 0.3 11.2 5.6 0.28 11.3 2.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4710) IQ PF00612.27 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 3.5e-09 35.7 13.5 0.0012 18.4 0.7 3.2 3 0 0 3 3 3 3 IQ calmodulin-binding motif GP67 PF17634.2 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 0.0051 17.2 1.5 1.7 9.1 0.1 2.1 1 1 1 2 2 2 2 Gene product 67 DUF3072 PF11272.8 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 0.013 15.3 5.0 1.3 9.0 0.7 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3072) CENP-B_dimeris PF09026.10 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 0.015 15.6 0.8 1.3 9.5 0.1 2.1 2 0 0 2 2 2 0 Centromere protein B dimerisation domain Planc_extracel PF07595.12 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 0.21 11.4 7.2 4.9 7.1 0.8 2.8 2 0 0 2 2 2 0 Planctomycete extracellular Spo7_2_N PF15407.6 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_1 - 0.23 11.1 4.1 6.8 6.4 0.3 2.8 2 2 0 2 2 2 0 Sporulation protein family 7 DUF5378 PF17349.2 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_1 - 0.32 10.3 3.6 4.3 6.6 0.6 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5378) Fer2 PF00111.27 NODE_54138_length_323_cov_6261.593750_g46208_i0forward_frame_1 - 2e-05 24.5 0.1 3.6e-05 23.6 0.1 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain DnaJ_C PF01556.18 NODE_54128_length_324_cov_1.719723_g46198_i0forward_frame_1 - 8.5e-14 51.9 0.0 9.7e-14 51.7 0.0 1.0 1 0 0 1 1 1 1 DnaJ C terminal domain PUA_2 PF14306.6 NODE_54123_length_324_cov_1.916955_g46193_i0reverse_frame_1 - 0.24 11.1 0.0 0.31 10.7 0.0 1.2 1 0 0 1 1 1 0 PUA-like domain Form-deh_trans PF09163.11 NODE_54116_length_324_cov_2.193772_g46186_i0reverse_frame_1 - 0.053 13.3 0.1 0.087 12.6 0.1 1.3 1 0 0 1 1 1 0 Formate dehydrogenase N, transmembrane Seryl_tRNA_N PF02403.22 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 0.0081 16.4 12.1 0.014 15.7 12.1 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Jnk-SapK_ap_N PF09744.9 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 0.0083 16.4 14.5 0.0088 16.3 14.5 1.2 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 DUF1664 PF07889.12 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 0.054 13.5 7.6 0.062 13.3 7.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 0.17 11.1 8.5 0.21 10.9 8.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) MmgE_PrpD PF03972.14 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 0.17 10.4 0.8 0.26 9.8 0.8 1.2 1 0 0 1 1 1 0 MmgE/PrpD family DUF3552 PF12072.8 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 0.21 11.0 17.5 0.24 10.8 17.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) DUF16 PF01519.16 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 0.26 11.8 12.9 0.36 11.3 12.9 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF16 GvpL_GvpF PF06386.11 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 0.27 11.2 6.0 0.31 11.0 6.0 1.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF Cupin_8 PF13621.6 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 0.33 10.6 6.2 0.38 10.4 6.2 1.0 1 0 0 1 1 1 0 Cupin-like domain Exonuc_VII_L PF02601.15 NODE_54103_length_324_cov_3.003460_g46173_i0forward_frame_1 - 7.5 6.0 11.2 8.6 5.8 11.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Nitr_red_alph_N PF14710.6 NODE_54100_length_324_cov_3.128028_g46170_i0reverse_frame_1 - 2e-18 66.6 4.9 2.7e-18 66.1 4.0 1.7 2 0 0 2 2 2 1 Respiratory nitrate reductase alpha N-terminal Molybdop_Fe4S4 PF04879.16 NODE_54100_length_324_cov_3.128028_g46170_i0reverse_frame_1 - 0.00048 20.1 0.2 0.00073 19.5 0.2 1.4 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain CagZ PF09053.10 NODE_54091_length_324_cov_53.224913_g46161_i0reverse_frame_1 - 0.012 15.3 0.2 0.014 15.0 0.2 1.1 1 0 0 1 1 1 0 CagZ # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks217.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks217.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks217.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks217.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2866 PF11065.8 NODE_54086_length_324_cov_64.965398_g46156_i0forward_frame_1 - 0.13 12.3 0.9 0.19 11.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2866) DUF5427 PF10310.9 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_1 - 0.62 9.0 13.0 0.62 9.0 13.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5427) Connexin PF00029.19 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_1 - 0.97 9.1 6.6 1 9.1 6.6 1.1 1 0 0 1 1 1 0 Connexin Atg14 PF10186.9 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_1 - 3 6.8 18.6 3.4 6.7 18.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 RR_TM4-6 PF06459.12 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_1 - 3.7 7.3 12.8 3.7 7.3 12.8 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 NPCC PF08058.11 NODE_54057_length_324_cov_185.667820_g46127_i0forward_frame_1 - 0.25 11.4 3.0 0.29 11.2 3.0 1.1 1 0 0 1 1 1 0 Nuclear pore complex component FDC-SP PF15215.6 NODE_54052_length_324_cov_244.664360_g46122_i0reverse_frame_1 - 0.026 15.0 0.1 0.026 15.0 0.1 1.6 2 0 0 2 2 2 0 Follicular dendritic cell secreted peptide Defensin_big PF14862.6 NODE_54051_length_324_cov_275.377163_g46121_i0forward_frame_1 - 0.048 14.0 0.2 0.063 13.6 0.2 1.3 1 0 0 1 1 1 0 Big defensin PliI PF16743.5 NODE_54049_length_324_cov_423.190311_g46119_i0forward_frame_1 - 0.17 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Periplasmic lysozyme inhibitor of I-type lysozyme DUF1138 PF06592.13 NODE_54048_length_324_cov_1216.913495_g46118_i0reverse_frame_1 - 0.0091 16.0 0.0 0.014 15.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1138) Fer2 PF00111.27 NODE_54045_length_324_cov_6142.958478_g46115_i0reverse_frame_1 - 3.2e-05 23.8 0.8 4.1e-05 23.5 0.1 1.5 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain DUF2721 PF11026.8 NODE_54037_length_325_cov_1.427586_g46107_i0reverse_frame_3 - 0.0029 17.5 0.2 0.0033 17.3 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2721) Solute_trans_a PF03619.16 NODE_54037_length_325_cov_1.427586_g46107_i0reverse_frame_3 - 0.022 14.3 0.3 0.027 14.0 0.3 1.1 1 0 0 1 1 1 0 Organic solute transporter Ostalpha COX_ARM PF06481.14 NODE_54036_length_325_cov_1.468966_g46106_i0reverse_frame_3 - 5.3e-14 51.8 0.3 8.1e-14 51.2 0.3 1.2 1 0 0 1 1 1 1 COX Aromatic Rich Motif Acyltransferase PF01553.21 NODE_54036_length_325_cov_1.468966_g46106_i0forward_frame_2 - 0.025 14.2 0.2 0.037 13.6 0.2 1.2 1 0 0 1 1 1 0 Acyltransferase FAM86 PF14904.6 NODE_54035_length_325_cov_1.489655_g46105_i0reverse_frame_2 - 0.032 14.3 1.8 0.063 13.4 0.9 1.9 1 1 0 1 1 1 0 Family of unknown function Phage_T7_tail PF03906.14 NODE_54031_length_325_cov_1.803448_g46101_i0forward_frame_2 - 0.2 11.3 0.1 0.26 10.9 0.1 1.1 1 0 0 1 1 1 0 Phage T7 tail fibre protein tRNA-synt_1e PF01406.19 NODE_54023_length_325_cov_2.113793_g46093_i0reverse_frame_3 - 8.5e-49 166.5 0.6 9.3e-49 166.4 0.6 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 NODE_54023_length_325_cov_2.113793_g46093_i0reverse_frame_3 - 3.3e-08 32.7 0.2 3.7e-08 32.5 0.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 NODE_54023_length_325_cov_2.113793_g46093_i0reverse_frame_3 - 1e-06 27.3 0.0 1.2e-06 27.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 NODE_54023_length_325_cov_2.113793_g46093_i0reverse_frame_3 - 3.3e-06 26.3 0.0 3.4e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) Imm52 PF15579.6 NODE_54019_length_325_cov_2.282759_g46089_i0reverse_frame_2 - 0.031 14.1 0.5 0.11 12.4 0.1 2.1 1 1 2 3 3 3 0 Immunity protein 52 RCC1_2 PF13540.6 NODE_54019_length_325_cov_2.282759_g46089_i0forward_frame_2 - 2.8e-06 26.9 5.3 0.13 12.1 0.3 3.5 3 1 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat SIS_2 PF13580.6 NODE_54019_length_325_cov_2.282759_g46089_i0forward_frame_2 - 0.00071 19.6 0.4 0.0013 18.8 0.4 1.5 1 1 0 1 1 1 1 SIS domain DUF1455 PF07306.11 NODE_54019_length_325_cov_2.282759_g46089_i0forward_frame_2 - 0.056 13.4 1.3 0.064 13.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1455) U6-snRNA_bdg PF10596.9 NODE_54014_length_325_cov_2.634483_g46084_i0reverse_frame_3 - 0.0065 16.4 0.4 0.0077 16.2 0.4 1.1 1 0 0 1 1 1 1 U6-snRNA interacting domain of PrP8 Metallothio PF00131.20 NODE_54009_length_325_cov_2.868966_g46079_i0reverse_frame_2 - 0.7 10.1 14.0 0.36 11.0 8.9 2.0 2 0 0 2 2 2 0 Metallothionein DUF515 PF04415.12 NODE_54006_length_325_cov_3.003448_g46076_i0forward_frame_3 - 1.6 7.0 7.6 1.7 6.9 7.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) adh_short PF00106.25 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 3.7e-15 55.9 0.7 4.2e-15 55.7 0.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 3.1e-10 40.0 0.4 3.9e-10 39.7 0.4 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 6.7e-07 29.4 0.2 7.8e-07 29.2 0.2 1.1 1 0 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 0.00027 20.4 0.2 0.00032 20.2 0.2 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase THF_DHG_CYH_C PF02882.19 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 0.0014 18.0 0.1 0.0016 17.8 0.1 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 0.0022 17.5 0.1 0.0027 17.2 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family LysM PF01476.20 NODE_54003_length_325_cov_3.758621_g46073_i0forward_frame_2 - 1.7e-10 40.8 0.2 3.2e-10 39.9 0.2 1.5 1 0 0 1 1 1 1 LysM domain Enkurin PF13864.6 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.039 14.4 3.5 0.049 14.1 3.5 1.3 1 0 0 1 1 1 0 Calmodulin-binding DUF1804 PF08822.11 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.043 13.8 0.8 0.044 13.8 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) DivIC PF04977.15 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.12 12.2 6.3 3.1 7.6 0.2 2.3 1 1 1 2 2 2 0 Septum formation initiator NPV_P10 PF05531.12 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.43 11.1 5.6 0.66 10.5 5.6 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein FapA PF03961.13 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.89 8.1 9.1 1 7.9 9.1 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A bZIP_1 PF00170.21 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 4.8 7.4 10.3 2 8.5 3.1 2.8 1 1 2 3 3 3 0 bZIP transcription factor Gaa1 PF04114.14 NODE_54001_length_325_cov_4.896552_g46071_i0reverse_frame_3 - 3.1 6.7 9.1 6.8 5.6 9.1 1.6 1 1 0 1 1 1 0 Gaa1-like, GPI transamidase component DUF5136 PF17199.4 NODE_54000_length_325_cov_6.455172_g46070_i0reverse_frame_3 - 0.072 12.8 0.1 0.15 11.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF5136) Herpes_IE68 PF02479.16 NODE_54000_length_325_cov_6.455172_g46070_i0forward_frame_3 - 6.2 6.4 6.6 2.9 7.5 1.8 2.1 1 1 1 2 2 2 0 Herpesvirus immediate early protein EndIII_4Fe-2S PF10576.9 NODE_53996_length_325_cov_10.475862_g46066_i0reverse_frame_3 - 4.5 7.7 7.4 15 6.0 0.6 2.4 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III Wzy_C PF04932.15 NODE_53996_length_325_cov_10.475862_g46066_i0forward_frame_3 - 0.14 11.8 0.8 0.26 10.9 0.7 1.6 1 1 0 1 1 1 0 O-Antigen ligase DUF4800 PF16057.5 NODE_53995_length_325_cov_44.324138_g46065_i0reverse_frame_2 - 0.018 14.3 1.4 0.023 14.0 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4800) zf-RING_5 PF14634.6 NODE_53991_length_325_cov_49.027586_g46061_i0forward_frame_2 - 0.17 11.8 2.1 0.32 11.0 0.3 2.0 2 0 0 2 2 2 0 zinc-RING finger domain ThrE PF06738.12 NODE_53989_length_325_cov_51.844828_g46059_i0forward_frame_2 - 0.17 11.2 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter RCC1_2 PF13540.6 NODE_53978_length_325_cov_68.486207_g46048_i0reverse_frame_2 - 0.084 12.7 0.9 0.38 10.6 0.0 2.3 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat UvdE PF03851.14 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_3 - 0.016 14.5 0.8 0.017 14.4 0.8 1.1 1 0 0 1 1 1 0 UV-endonuclease UvdE MIT PF04212.18 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_2 - 0.0027 17.8 1.9 0.003 17.6 0.1 2.0 2 0 0 2 2 2 1 MIT (microtubule interacting and transport) domain ATP-gua_Ptrans PF00217.19 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_2 - 0.055 12.9 0.0 0.078 12.4 0.0 1.2 1 0 0 1 1 1 0 ATP:guanido phosphotransferase, C-terminal catalytic domain Fcf1 PF04900.12 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_2 - 0.078 13.4 1.0 0.087 13.2 1.0 1.1 1 0 0 1 1 1 0 Fcf1 TPR_14 PF13428.6 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_2 - 0.081 13.8 0.1 0.18 12.7 0.0 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_2 - 0.12 12.4 0.9 4.3 7.6 0.2 3.0 1 1 1 2 2 2 0 Tetratricopeptide repeat FTCD_N PF07837.12 NODE_53974_length_325_cov_77.086207_g46044_i0reverse_frame_3 - 0.041 13.7 0.0 0.045 13.5 0.0 1.1 1 0 0 1 1 1 0 Formiminotransferase domain, N-terminal subdomain HD PF01966.22 NODE_53973_length_325_cov_79.931034_g46043_i0reverse_frame_2 - 0.074 13.3 0.0 0.079 13.2 0.0 1.3 1 0 0 1 1 1 0 HD domain Auxin_inducible PF02519.14 NODE_53973_length_325_cov_79.931034_g46043_i0forward_frame_2 - 0.018 15.2 0.0 0.022 14.9 0.0 1.2 1 0 0 1 1 1 0 Auxin responsive protein ERAP1_C PF11838.8 NODE_53972_length_325_cov_81.948276_g46042_i0forward_frame_3 - 0.034 13.7 0.0 0.035 13.7 0.0 1.0 1 0 0 1 1 1 0 ERAP1-like C-terminal domain zf-CCCH_3 PF15663.5 NODE_53967_length_325_cov_96.741379_g46037_i0forward_frame_3 - 0.0015 18.7 0.4 0.0017 18.6 0.4 1.2 1 0 0 1 1 1 1 Zinc-finger containing family NUC202 PF08166.12 NODE_53966_length_325_cov_99.265517_g46036_i0forward_frame_2 - 0.095 12.8 1.1 0.2 11.8 0.1 1.8 1 1 1 2 2 2 0 NUC202 domain UQ_con PF00179.26 NODE_53965_length_325_cov_120.048276_g46035_i0reverse_frame_2 - 6.9e-16 58.2 0.1 8.5e-16 57.9 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF4219 PF13961.6 NODE_53965_length_325_cov_120.048276_g46035_i0reverse_frame_2 - 0.057 13.1 0.0 0.087 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4219) DUF3456 PF11938.8 NODE_53965_length_325_cov_120.048276_g46035_i0forward_frame_2 - 0.16 12.5 0.0 0.19 12.2 0.0 1.1 1 0 0 1 1 1 0 TLR4 regulator and MIR-interacting MSAP FGFR3_TM PF18123.1 NODE_53963_length_325_cov_124.600000_g46033_i0reverse_frame_2 - 0.87 9.2 4.3 1.5 8.4 4.3 1.4 1 0 0 1 1 1 0 Fibroblast growth factor receptor 3 transmembrane domain IBR PF01485.21 NODE_53961_length_325_cov_138.958621_g46031_i0forward_frame_2 - 2.2e-05 24.6 4.6 2.2e-05 24.6 4.6 1.6 2 0 0 2 2 2 1 IBR domain, a half RING-finger domain zf-ribbon_3 PF13248.6 NODE_53961_length_325_cov_138.958621_g46031_i0forward_frame_2 - 0.21 11.1 0.4 0.21 11.1 0.4 3.3 4 0 0 4 4 4 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 NODE_53961_length_325_cov_138.958621_g46031_i0forward_frame_2 - 2.6 8.0 9.2 6.3 6.8 0.1 3.5 4 0 0 4 4 4 0 zinc-ribbon domain COPIIcoated_ERV PF07970.12 NODE_53960_length_325_cov_150.282759_g46030_i0reverse_frame_3 - 0.064 13.1 4.7 0.08 12.8 4.7 1.3 1 1 0 1 1 1 0 Endoplasmic reticulum vesicle transporter Ctr PF04145.15 NODE_53956_length_325_cov_268.275862_g46026_i0forward_frame_2 - 0.099 13.3 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Ctr copper transporter family DUF4485 PF14846.6 NODE_53953_length_325_cov_287.406897_g46023_i0reverse_frame_2 - 0.0046 17.0 0.6 0.0083 16.2 0.6 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4485) SPATA19 PF15212.6 NODE_53946_length_325_cov_2251.755172_g18917_i3reverse_frame_3 - 0.011 15.9 0.1 0.014 15.6 0.1 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial DUF5496 PF17600.2 NODE_53946_length_325_cov_2251.755172_g18917_i3reverse_frame_3 - 0.097 12.7 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5496) ABC_membrane PF00664.23 NODE_53941_length_326_cov_1.202749_g46012_i0forward_frame_2 - 4.8e-07 29.7 3.3 5.6e-07 29.5 3.3 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region PTR2 PF00854.21 NODE_53941_length_326_cov_1.202749_g46012_i0forward_frame_2 - 2.9e-05 23.1 0.3 3.2e-05 22.9 0.3 1.1 1 0 0 1 1 1 1 POT family Sec20 PF03908.13 NODE_53941_length_326_cov_1.202749_g46012_i0forward_frame_2 - 0.021 14.7 0.7 0.041 13.8 0.7 1.4 1 0 0 1 1 1 0 Sec20 BALF1 PF06861.11 NODE_53939_length_326_cov_1.463918_g46010_i0reverse_frame_3 - 0.069 12.8 0.1 0.074 12.7 0.1 1.1 1 0 0 1 1 1 0 BALF1 protein DUF4337 PF14235.6 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_3 - 1.7 8.7 5.2 0.8 9.8 2.9 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) Shugoshin_N PF07558.11 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.0018 18.1 5.3 0.022 14.6 0.9 2.6 2 1 0 2 2 2 1 Shugoshin N-terminal coiled-coil region YabA PF06156.13 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.007 17.0 1.9 0.011 16.4 1.7 1.4 1 1 0 1 1 1 1 Initiation control protein YabA TMCO5 PF14992.6 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.0099 15.5 6.5 0.011 15.3 6.5 1.1 1 0 0 1 1 1 1 TMCO5 family TACC_C PF05010.14 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.038 13.8 6.0 1.4 8.6 0.1 2.1 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Speriolin_C PF15059.6 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.047 13.8 0.4 0.054 13.6 0.4 1.1 1 0 0 1 1 1 0 Speriolin C-terminus UPF0242 PF06785.11 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.1 12.7 4.5 0.11 12.6 4.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Val_tRNA-synt_C PF10458.9 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.12 12.7 4.5 0.78 10.1 1.2 2.9 2 1 1 3 3 3 0 Valyl tRNA synthetase tRNA binding arm TMF_DNA_bd PF12329.8 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.29 11.1 13.2 1.1 9.3 5.6 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Csm1_N PF18504.1 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.33 11.3 6.0 0.88 10.0 3.8 2.5 1 1 1 2 2 2 0 Csm1 N-terminal domain TMPIT PF07851.13 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 1 8.5 4.6 1.1 8.4 4.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein Lip_prot_lig_C PF10437.9 NODE_53936_length_326_cov_1.556701_g46007_i0reverse_frame_3 - 0.018 15.0 0.1 0.027 14.5 0.1 1.2 1 0 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus Tap-RNA_bind PF09162.10 NODE_53936_length_326_cov_1.556701_g46007_i0reverse_frame_3 - 0.036 13.9 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 Tap, RNA-binding MatE PF01554.18 NODE_53935_length_326_cov_1.621993_g46006_i0forward_frame_3 - 2.6e-17 62.9 0.6 3e-17 62.7 0.6 1.0 1 0 0 1 1 1 1 MatE SBP_bac_3 PF00497.20 NODE_53932_length_326_cov_1.749141_g46003_i0reverse_frame_3 - 2.3e-23 82.8 0.1 2.5e-23 82.7 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 DUF5603 PF18231.1 NODE_53932_length_326_cov_1.749141_g46003_i0reverse_frame_3 - 0.025 14.9 0.1 2.4 8.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5603) DUF2788 PF10981.8 NODE_53931_length_326_cov_1.780069_g46002_i0forward_frame_2 - 1.9 8.5 6.9 0.92 9.6 1.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2788) SRP-alpha_N PF04086.13 NODE_53930_length_326_cov_1.828179_g46001_i0reverse_frame_2 - 6.2 6.7 12.6 7.2 6.4 12.6 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal DUF3539 PF12058.8 NODE_53928_length_326_cov_2.089347_g45999_i0reverse_frame_3 - 0.1 12.8 0.2 0.14 12.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3539) LRR_9 PF14580.6 NODE_53928_length_326_cov_2.089347_g45999_i0reverse_frame_2 - 2.5e-07 30.4 0.0 3e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 NODE_53928_length_326_cov_2.089347_g45999_i0reverse_frame_2 - 0.017 15.6 1.7 0.24 11.9 0.1 2.7 2 1 1 3 3 3 0 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_53928_length_326_cov_2.089347_g45999_i0reverse_frame_2 - 0.044 13.5 1.1 2.8 7.8 0.0 2.8 2 1 0 3 3 3 0 Leucine rich repeat MFS_1 PF07690.16 NODE_53925_length_326_cov_2.243986_g45996_i0forward_frame_3 - 8.5e-05 21.6 2.0 8.5e-05 21.6 2.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Neurexophilin PF06312.12 NODE_53924_length_326_cov_2.350515_g45995_i0forward_frame_3 - 0.058 12.8 0.2 0.071 12.6 0.2 1.1 1 0 0 1 1 1 0 Neurexophilin DUF1936 PF09151.10 NODE_53923_length_326_cov_2.432990_g45994_i0reverse_frame_3 - 0.13 12.2 0.3 0.19 11.7 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) Gal4_dimer PF03902.13 NODE_53914_length_326_cov_2.573883_g45985_i0forward_frame_2 - 0.1 12.7 0.2 3.7 7.8 0.0 2.2 1 1 1 2 2 2 0 Gal4-like dimerisation domain Metal_CEHH PF14455.6 NODE_53913_length_326_cov_2.604811_g45984_i0forward_frame_3 - 0.011 15.4 0.0 0.013 15.1 0.0 1.1 1 0 0 1 1 1 0 Predicted metal binding domain Acetyltransf_5 PF13444.6 NODE_53911_length_326_cov_2.683849_g45982_i0reverse_frame_2 - 0.078 13.7 0.0 0.12 13.1 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Ciart PF15673.5 NODE_53910_length_326_cov_2.711340_g45981_i0forward_frame_2 - 0.058 12.8 0.0 0.058 12.8 0.0 1.1 1 0 0 1 1 1 0 Circadian-associated transcriptional repressor PRA1 PF03208.19 NODE_53908_length_326_cov_3.010309_g45979_i0forward_frame_2 - 0.43 10.2 12.1 0.55 9.9 12.1 1.2 1 0 0 1 1 1 0 PRA1 family protein Enolase_C PF00113.22 NODE_53907_length_326_cov_3.092784_g45978_i0reverse_frame_3 - 9.5e-10 38.2 0.2 1.1e-09 38.0 0.2 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain zf-RING_5 PF14634.6 NODE_53905_length_326_cov_3.518900_g45976_i0reverse_frame_3 - 0.46 10.5 6.8 0.083 12.9 3.0 1.7 2 0 0 2 2 2 0 zinc-RING finger domain RNA_pol_Rpb5_N PF03871.14 NODE_53900_length_326_cov_17.463918_g45971_i0reverse_frame_2 - 0.047 14.3 0.1 0.063 13.9 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb5, N-terminal domain Adeno_100 PF02438.16 NODE_53900_length_326_cov_17.463918_g45971_i0forward_frame_3 - 0.077 11.2 0.1 0.091 10.9 0.1 1.1 1 0 0 1 1 1 0 Late 100kD protein CW_binding_1 PF01473.20 NODE_53898_length_326_cov_41.178694_g45969_i0reverse_frame_2 - 0.034 14.5 2.7 0.082 13.3 2.7 1.7 1 0 0 1 1 1 0 Putative cell wall binding repeat SieB PF14163.6 NODE_53897_length_326_cov_54.367698_g45968_i0reverse_frame_2 - 0.016 14.7 1.0 0.02 14.4 1.0 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B COMMD1_N PF17221.3 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_3 - 0.005 17.1 1.8 0.0063 16.8 1.8 1.2 1 0 0 1 1 1 1 COMMD1 N-terminal domain AGH PF17558.2 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_3 - 0.26 11.5 6.0 0.074 13.2 3.0 1.6 1 1 1 2 2 2 0 Androgenic gland hormone SRP14 PF02290.15 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_3 - 0.45 10.9 3.7 0.3 11.5 1.9 1.6 1 1 1 2 2 2 0 Signal recognition particle 14kD protein CDC45 PF02724.14 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_3 - 3.9 5.7 9.8 4.2 5.6 9.8 1.0 1 0 0 1 1 1 0 CDC45-like protein KinB_sensor PF16767.5 NODE_53893_length_326_cov_63.158076_g45964_i0reverse_frame_3 - 0.036 14.5 0.3 0.054 14.0 0.3 1.4 1 1 0 1 1 1 0 Sensor domain of alginate biosynthesis sensor protein KinB RNase_J_C PF17770.1 NODE_53893_length_326_cov_63.158076_g45964_i0reverse_frame_3 - 0.24 12.5 2.2 26 6.0 0.1 2.6 1 1 0 2 2 2 0 Ribonuclease J C-terminal domain BLUF PF04940.12 NODE_53891_length_326_cov_64.756014_g45962_i0reverse_frame_2 - 0.081 13.1 0.2 0.095 12.8 0.2 1.1 1 0 0 1 1 1 0 Sensors of blue-light using FAD Noggin PF05806.12 NODE_53887_length_326_cov_66.807560_g45958_i0reverse_frame_2 - 0.058 13.3 0.8 0.075 12.9 0.8 1.1 1 0 0 1 1 1 0 Noggin Poty_PP PF08440.10 NODE_53886_length_326_cov_68.195876_g45957_i0forward_frame_3 - 0.0064 15.6 0.6 0.0064 15.6 0.6 1.1 1 0 0 1 1 1 1 Potyviridae polyprotein RCC1_2 PF13540.6 NODE_53878_length_326_cov_81.577320_g45949_i0reverse_frame_2 - 1.6e-07 30.9 2.7 0.098 12.5 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_53878_length_326_cov_81.577320_g45949_i0reverse_frame_2 - 0.13 12.3 0.0 11 6.0 0.0 2.5 3 0 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Spore_coat_CotO PF14153.6 NODE_53874_length_326_cov_89.316151_g45945_i0forward_frame_3 - 0.019 14.9 0.2 0.021 14.8 0.2 1.2 1 1 0 1 1 1 0 Spore coat protein CotO Glyco_hydro_30 PF02055.16 NODE_53873_length_326_cov_91.718213_g45944_i0forward_frame_3 - 6.8e-12 45.0 0.0 8.4e-12 44.7 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 TIM-barrel domain PqqA PF08042.11 NODE_53870_length_326_cov_94.017182_g45941_i0forward_frame_2 - 0.18 11.9 0.1 0.18 11.9 0.1 2.3 3 0 0 3 3 3 0 PqqA family Lamprin PF06403.11 NODE_53869_length_326_cov_94.824742_g45940_i0reverse_frame_3 - 0.0055 16.7 3.8 0.0067 16.4 3.8 1.1 1 0 0 1 1 1 1 Lamprin Med9 PF07544.13 NODE_53867_length_326_cov_98.759450_g45938_i0reverse_frame_2 - 0.11 12.6 0.8 0.15 12.2 0.8 1.3 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 NACHT_N PF17100.5 NODE_53866_length_326_cov_99.058419_g45937_i0reverse_frame_2 - 0.32 10.8 5.9 0.4 10.5 5.9 1.0 1 0 0 1 1 1 0 N-terminal domain of NWD NACHT-NTPase WW_FCH_linker PF16623.5 NODE_53864_length_326_cov_106.223368_g45935_i0forward_frame_2 - 0.77 10.6 6.8 1.1 10.1 6.2 1.6 1 1 1 2 2 2 0 Unstructured linker region between on GAS7 protein Mem_trans PF03547.18 NODE_53864_length_326_cov_106.223368_g45935_i0forward_frame_2 - 7.1 4.9 5.1 7.7 4.8 5.1 1.0 1 0 0 1 1 1 0 Membrane transport protein DeoRC PF00455.22 NODE_53861_length_326_cov_126.292096_g45932_i0forward_frame_2 - 0.0039 17.2 0.0 0.0064 16.4 0.0 1.4 1 1 0 1 1 1 1 DeoR C terminal sensor domain CMV_US PF08001.11 NODE_53853_length_326_cov_167.336770_g45924_i0reverse_frame_2 - 0.058 12.7 0.9 0.058 12.7 0.9 1.2 1 0 0 1 1 1 0 CMV US GST_C_3 PF14497.6 NODE_53853_length_326_cov_167.336770_g45924_i0forward_frame_2 - 0.00069 19.8 0.0 0.0011 19.2 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 NODE_53853_length_326_cov_167.336770_g45924_i0forward_frame_2 - 0.0038 17.4 0.0 0.0063 16.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain DUF4368 PF14287.6 NODE_53853_length_326_cov_167.336770_g45924_i0forward_frame_2 - 0.064 13.6 0.2 0.1 12.9 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4368) SLC3A2_N PF16028.5 NODE_53852_length_326_cov_176.192440_g45923_i0forward_frame_2 - 0.067 12.8 4.1 4.5 6.9 2.3 2.1 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus UPF0239 PF06783.11 NODE_53848_length_326_cov_379.288660_g45919_i0reverse_frame_2 - 0.085 13.0 2.0 0.13 12.5 2.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) YMF19 PF02326.15 NODE_53848_length_326_cov_379.288660_g45919_i0forward_frame_2 - 0.012 16.4 0.8 0.014 16.1 0.8 1.3 1 0 0 1 1 1 0 Plant ATP synthase F0 Shisa PF13908.6 NODE_53845_length_326_cov_994.130584_g45916_i0reverse_frame_2 - 0.069 13.4 0.0 0.075 13.3 0.0 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Fijivirus_P9-2 PF06837.11 NODE_53845_length_326_cov_994.130584_g45916_i0reverse_frame_2 - 5 6.5 7.8 7.1 6.0 7.8 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein HCV_NS2 PF01538.18 NODE_53845_length_326_cov_994.130584_g45916_i0forward_frame_2 - 0.0013 18.4 0.4 0.0015 18.2 0.4 1.0 1 0 0 1 1 1 1 Hepatitis C virus non-structural protein NS2 Inhibitor_I29 PF08246.12 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 4.5e-16 59.0 4.9 4.6e-16 59.0 4.2 1.4 1 1 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Romo1 PF10247.9 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 0.058 13.8 0.1 0.097 13.0 0.1 1.5 1 0 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 DUF3524 PF12038.8 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 0.073 12.9 0.2 0.1 12.4 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) Tmemb_9 PF05434.11 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 0.13 12.1 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 TMEM9 Varsurf_PPLC PF03490.13 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 0.16 11.9 0.1 2.4 8.2 0.1 2.1 2 0 0 2 2 2 0 Variant-surface-glycoprotein phospholipase C NPR1_interact PF15699.5 NODE_53842_length_326_cov_16233.879725_g45913_i0reverse_frame_2 - 0.021 15.4 0.2 0.03 15.0 0.2 1.2 1 0 0 1 1 1 0 NPR1 interacting ABC_tran PF00005.27 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 1.4e-12 48.3 0.2 3.3e-12 47.1 0.1 1.6 2 0 0 2 2 2 1 ABC transporter MMR_HSR1 PF01926.23 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.0015 18.6 0.1 0.0025 17.9 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.0055 16.4 0.0 0.0083 15.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.008 16.3 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_23 PF13476.6 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.033 14.7 0.2 0.052 14.0 0.1 1.3 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.076 12.9 0.0 0.082 12.8 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase MeaB PF03308.16 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.085 11.8 0.0 0.097 11.6 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.13 11.8 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.18 11.9 0.1 0.28 11.3 0.1 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain T2SSE PF00437.20 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.21 10.6 0.0 0.21 10.6 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF4734 PF15881.5 NODE_53836_length_327_cov_1.602740_g45907_i0reverse_frame_2 - 0.011 15.9 0.0 0.015 15.4 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4734) DUF1516 PF07457.11 NODE_53836_length_327_cov_1.602740_g45907_i0forward_frame_3 - 0.00069 19.8 4.8 0.00088 19.5 4.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1516) DUF3937 PF13073.6 NODE_53833_length_327_cov_1.791096_g45904_i0reverse_frame_2 - 0.085 13.0 1.3 0.27 11.4 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3937) MazG_C PF18722.1 NODE_53832_length_327_cov_1.804795_g45903_i0forward_frame_2 - 0.25 10.8 0.3 0.32 10.5 0.3 1.1 1 0 0 1 1 1 0 MazG C-terminal domain CTU2 PF10288.9 NODE_53829_length_327_cov_1.839041_g45900_i0reverse_frame_2 - 0.0067 16.7 1.7 0.0087 16.3 1.7 1.1 1 0 0 1 1 1 1 Cytoplasmic tRNA 2-thiolation protein 2 YojJ PF10372.9 NODE_53829_length_327_cov_1.839041_g45900_i0reverse_frame_2 - 0.046 13.8 0.9 0.069 13.3 0.9 1.3 1 0 0 1 1 1 0 Bacterial membrane-spanning protein N-terminus Pyridoxal_deC PF00282.19 NODE_53827_length_327_cov_1.886986_g45898_i0reverse_frame_2 - 1.7e-17 63.2 0.0 1.9e-17 63.1 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 NODE_53827_length_327_cov_1.886986_g45898_i0reverse_frame_2 - 0.014 14.7 0.0 0.014 14.7 0.0 1.1 1 0 0 1 1 1 0 Beta-eliminating lyase Aminotran_5 PF00266.19 NODE_53827_length_327_cov_1.886986_g45898_i0reverse_frame_2 - 0.041 12.8 0.0 0.046 12.7 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-V MORN PF02493.20 NODE_53826_length_327_cov_1.897260_g45897_i0forward_frame_3 - 8.3e-13 47.4 16.1 8.4e-05 22.2 1.7 4.2 4 0 0 4 4 4 4 MORN repeat MORN_2 PF07661.13 NODE_53826_length_327_cov_1.897260_g45897_i0forward_frame_3 - 1.1 9.7 9.7 12 6.5 0.1 4.4 4 1 0 4 4 4 0 MORN repeat variant NAD1 PF18778.1 NODE_53823_length_327_cov_1.993151_g45894_i0forward_frame_2 - 0.072 13.2 0.0 0.09 12.9 0.0 1.1 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 DYW_deaminase PF14432.6 NODE_53822_length_327_cov_2.023973_g45893_i0reverse_frame_3 - 0.00081 19.3 0.3 0.00092 19.1 0.3 1.1 1 0 0 1 1 1 1 DYW family of nucleic acid deaminases DLH PF01738.18 NODE_53822_length_327_cov_2.023973_g45893_i0reverse_frame_3 - 0.025 14.2 0.1 0.032 13.8 0.1 1.3 1 1 0 1 1 1 0 Dienelactone hydrolase family SLATT_4 PF18186.1 NODE_53822_length_327_cov_2.023973_g45893_i0reverse_frame_3 - 0.035 13.7 0.9 0.048 13.3 0.8 1.3 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 PAP_central PF04928.17 NODE_53822_length_327_cov_2.023973_g45893_i0reverse_frame_3 - 0.12 11.3 2.8 0.14 11.1 2.8 1.0 1 0 0 1 1 1 0 Poly(A) polymerase central domain DUF2207 PF09972.9 NODE_53816_length_327_cov_2.160959_g45887_i0forward_frame_2 - 6.7e-11 41.6 0.0 6.9e-11 41.6 0.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) GCD14_N PF14801.6 NODE_53816_length_327_cov_2.160959_g45887_i0forward_frame_2 - 0.15 11.9 0.4 0.35 10.8 0.1 1.8 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit N-term CCT_2 PF09425.10 NODE_53812_length_327_cov_2.256849_g45883_i0forward_frame_2 - 4.4 7.3 14.6 0.15 12.0 6.8 2.4 2 0 0 2 2 2 0 Divergent CCT motif RdRP PF05183.12 NODE_53810_length_327_cov_2.465753_g45881_i0forward_frame_3 - 3.2e-14 52.5 0.1 3.3e-14 52.5 0.1 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase DUF3251 PF11622.8 NODE_53809_length_327_cov_2.527397_g45880_i0reverse_frame_3 - 0.00012 21.8 0.0 0.00012 21.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3251) Gp_dh_N PF00044.24 NODE_53808_length_327_cov_2.561644_g45879_i0reverse_frame_3 - 1.3e-18 67.2 0.0 1.6e-18 66.9 0.0 1.1 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 NODE_53808_length_327_cov_2.561644_g45879_i0reverse_frame_3 - 0.00027 20.4 0.0 0.0003 20.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 NODE_53808_length_327_cov_2.561644_g45879_i0reverse_frame_3 - 0.11 12.7 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 TrkA-N domain DUF2777 PF10949.8 NODE_53805_length_327_cov_2.626712_g45876_i0reverse_frame_3 - 0.049 13.3 1.0 0.058 13.1 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) CDC4_D PF16856.5 NODE_53805_length_327_cov_2.626712_g45876_i0reverse_frame_3 - 0.18 11.7 4.0 0.3 11.0 4.0 1.3 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain LPD5 PF18799.1 NODE_53805_length_327_cov_2.626712_g45876_i0forward_frame_3 - 0.14 12.6 1.1 0.16 12.4 1.1 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 5 IBV_3A PF03617.13 NODE_53804_length_327_cov_2.640411_g45875_i0forward_frame_3 - 0.057 13.4 0.2 0.057 13.4 0.2 1.5 2 0 0 2 2 2 0 IBV 3A protein WW_FCH_linker PF16623.5 NODE_53803_length_327_cov_2.715753_g45874_i0reverse_frame_2 - 0.0088 16.8 1.0 0.015 16.1 1.0 1.4 1 0 0 1 1 1 1 Unstructured linker region between on GAS7 protein Biotin_lipoyl_2 PF13533.6 NODE_53802_length_327_cov_2.760274_g45873_i0reverse_frame_3 - 3.2e-06 26.9 0.0 6.9e-06 25.8 0.0 1.7 1 1 0 1 1 1 1 Biotin-lipoyl like DUF3570 PF12094.8 NODE_53802_length_327_cov_2.760274_g45873_i0reverse_frame_3 - 0.015 14.1 0.0 0.015 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3570) HlyD_D23 PF16576.5 NODE_53802_length_327_cov_2.760274_g45873_i0reverse_frame_3 - 0.07 12.3 0.1 0.082 12.1 0.1 1.2 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion DUF4071 PF13281.6 NODE_53802_length_327_cov_2.760274_g45873_i0forward_frame_2 - 0.15 11.1 0.0 0.19 10.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4071) Nodulin PF02451.15 NODE_53801_length_327_cov_2.787671_g45872_i0reverse_frame_2 - 0.0049 16.4 0.1 0.0056 16.2 0.1 1.1 1 0 0 1 1 1 1 Nodulin EF-hand_13 PF17958.1 NODE_53800_length_327_cov_2.859589_g45871_i0forward_frame_3 - 0.039 13.7 0.0 0.059 13.2 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain Mucin PF01456.17 NODE_53799_length_327_cov_2.883562_g45870_i0reverse_frame_2 - 4.6 7.2 52.6 7.9 6.5 52.6 1.4 1 0 0 1 1 1 0 Mucin-like glycoprotein FSA_C PF10479.9 NODE_53799_length_327_cov_2.883562_g45870_i0reverse_frame_2 - 6 4.9 22.8 7.2 4.6 22.8 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF4228 PF14009.6 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 0.0022 18.4 0.0 0.0024 18.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4228) SSP160 PF06933.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 0.015 13.5 21.6 0.018 13.3 21.6 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Secretin_N_2 PF07655.13 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 0.16 12.5 14.1 0.22 12.1 14.1 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain BES1_N PF05687.13 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 0.24 11.8 7.3 0.25 11.7 7.3 1.2 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal CCDC24 PF15669.5 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 1.5 8.7 6.4 1.7 8.5 6.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family Herpes_capsid PF06112.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 2 8.4 16.7 2 8.4 16.7 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein CDK2AP PF09806.9 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 2.3 8.2 10.4 2.8 7.9 10.4 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein DUF515 PF04415.12 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 3.8 5.8 19.4 4.3 5.6 19.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Nbas_N PF15492.6 NODE_53798_length_327_cov_3.133562_g45869_i0reverse_frame_2 - 0.03 13.6 0.0 0.035 13.4 0.0 1.1 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal CTP_synth_N PF06418.14 NODE_53797_length_327_cov_3.140411_g45868_i0forward_frame_2 - 2.9e-16 59.6 0.2 3.5e-16 59.3 0.2 1.1 1 0 0 1 1 1 1 CTP synthase N-terminus CbiA PF01656.23 NODE_53797_length_327_cov_3.140411_g45868_i0forward_frame_2 - 0.019 15.0 0.1 0.028 14.5 0.1 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain APH PF01636.23 NODE_53794_length_327_cov_3.448630_g45865_i0forward_frame_2 - 0.002 18.1 0.1 0.0026 17.7 0.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family NTP_transf_3 PF12804.7 NODE_53791_length_327_cov_3.839041_g45862_i0forward_frame_3 - 0.0052 17.2 0.0 0.0053 17.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 NODE_53791_length_327_cov_3.839041_g45862_i0forward_frame_3 - 0.011 15.4 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 0 Nucleotidyl transferase Polyketide_cyc2 PF10604.9 NODE_53788_length_327_cov_4.390411_g45859_i0forward_frame_2 - 0.039 14.2 0.3 0.043 14.1 0.3 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport SHIPPO-rpt PF07004.12 NODE_53787_length_327_cov_4.452055_g45858_i0forward_frame_3 - 0.00024 21.9 7.8 0.035 15.0 0.6 2.5 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat TMEM171 PF15471.6 NODE_53787_length_327_cov_4.452055_g45858_i0forward_frame_3 - 0.41 9.6 2.2 0.55 9.2 2.2 1.1 1 0 0 1 1 1 0 Transmembrane protein family 171 DUF5416 PF17437.2 NODE_53784_length_327_cov_10.537671_g45855_i0reverse_frame_2 - 0.16 11.7 0.1 0.19 11.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5416) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks218.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks218.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks218.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks218.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EF-hand_7 PF13499.6 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_2 - 0.014 15.9 0.1 0.015 15.8 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain pair Di19_C PF14571.6 NODE_53779_length_327_cov_43.308219_g45850_i0reverse_frame_3 - 0.052 14.1 5.7 0.058 13.9 4.6 1.6 1 1 1 2 2 2 0 Stress-induced protein Di19, C-terminal DUF3829 PF12889.7 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.00012 21.6 4.2 0.00015 21.4 4.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3829) Alpha-2-MRAP_C PF06401.11 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.0011 19.0 2.1 0.0014 18.6 2.1 1.1 1 0 0 1 1 1 1 Alpha-2-macroglobulin RAP, C-terminal domain NPV_P10 PF05531.12 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.0062 17.0 7.4 0.015 15.8 0.9 2.2 2 0 0 2 2 2 1 Nucleopolyhedrovirus P10 protein DUF3810 PF12725.7 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.008 15.6 0.8 0.0094 15.3 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3810) Val_tRNA-synt_C PF10458.9 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.038 14.3 3.4 0.047 14.0 3.4 1.2 1 0 0 1 1 1 0 Valyl tRNA synthetase tRNA binding arm Viral_P18 PF04521.13 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.059 13.2 0.5 0.1 12.4 0.3 1.4 1 1 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein Corazonin PF17308.2 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.12 12.7 1.4 0.15 12.4 1.4 1.1 1 0 0 1 1 1 0 Pro-corazonin Atg14 PF10186.9 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.17 10.9 6.2 0.2 10.7 6.2 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4795 PF16043.5 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.18 11.4 7.0 0.43 10.1 7.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) TRPM_tetra PF16519.5 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.19 11.9 5.6 5.3 7.2 0.7 2.6 2 1 0 2 2 2 0 Tetramerisation domain of TRPM Matrilin_ccoil PF10393.9 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.38 10.6 3.5 5.7 6.9 3.2 2.4 1 1 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin Phage_tail_APC PF16778.5 NODE_53777_length_327_cov_51.736301_g45848_i0reverse_frame_2 - 0.12 12.2 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein DUF3300 PF11737.8 NODE_53777_length_327_cov_51.736301_g45848_i0forward_frame_3 - 0.009 15.6 0.1 0.014 14.9 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3300) SK_channel PF03530.14 NODE_53776_length_327_cov_52.479452_g45847_i0forward_frame_2 - 0.011 15.7 0.2 0.014 15.4 0.2 1.2 1 0 0 1 1 1 0 Calcium-activated SK potassium channel TPR_MLP1_2 PF07926.12 NODE_53775_length_327_cov_53.273973_g45846_i0forward_frame_3 - 0.00056 20.0 13.0 0.00064 19.8 13.0 1.0 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein DUF4200 PF13863.6 NODE_53775_length_327_cov_53.273973_g45846_i0forward_frame_3 - 0.0071 16.7 17.3 0.031 14.7 17.3 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4200) DUF4795 PF16043.5 NODE_53775_length_327_cov_53.273973_g45846_i0forward_frame_3 - 0.06 12.9 10.6 0.081 12.5 10.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) EP400_N PF15790.5 NODE_53775_length_327_cov_53.273973_g45846_i0forward_frame_3 - 0.51 9.1 6.7 0.55 9.0 6.7 1.0 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal ZapB PF06005.12 NODE_53775_length_327_cov_53.273973_g45846_i0forward_frame_3 - 0.55 10.7 16.1 0.49 10.9 5.1 2.1 1 1 1 2 2 2 0 Cell division protein ZapB Histidinol_dh PF00815.20 NODE_53775_length_327_cov_53.273973_g45846_i0forward_frame_3 - 0.79 8.7 3.9 0.85 8.6 3.9 1.0 1 0 0 1 1 1 0 Histidinol dehydrogenase Siah-Interact_N PF09032.11 NODE_53775_length_327_cov_53.273973_g45846_i0forward_frame_3 - 1.1 9.7 11.8 3 8.2 1.5 3.0 2 1 1 3 3 3 0 Siah interacting protein, N terminal FapA PF03961.13 NODE_53775_length_327_cov_53.273973_g45846_i0forward_frame_3 - 3 6.4 9.3 3.3 6.2 9.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Xan_ur_permease PF00860.20 NODE_53771_length_327_cov_62.143836_g45842_i0reverse_frame_3 - 0.069 11.8 0.0 0.085 11.5 0.0 1.0 1 0 0 1 1 1 0 Permease family LZ3wCH PF18517.1 NODE_53770_length_327_cov_62.534247_g45841_i0reverse_frame_3 - 0.021 14.9 1.1 0.021 14.9 1.1 1.7 2 0 0 2 2 2 0 Leucine zipper with capping helix domain YMF19 PF02326.15 NODE_53764_length_327_cov_68.280822_g45835_i0reverse_frame_2 - 0.12 13.2 0.2 0.15 12.9 0.2 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 Ofd1_CTDD PF10637.9 NODE_53759_length_327_cov_79.215753_g45830_i0reverse_frame_3 - 1.6e-13 50.6 0.0 2.1e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Oxoglutarate and iron-dependent oxygenase degradation C-term RCC1_2 PF13540.6 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_2 - 7.3e-06 25.6 0.9 0.11 12.4 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_2 - 0.013 14.1 0.2 1.8 7.0 0.0 2.8 2 1 0 3 3 3 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Catalase_C PF18011.1 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_2 - 0.066 12.9 1.3 4.2 7.0 0.2 2.1 1 1 1 2 2 2 0 C-terminal domain found in long catalases DUF155 PF02582.14 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_2 - 0.094 12.8 0.0 8.1 6.5 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Ocular_alb PF02101.15 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_3 - 0.13 11.1 0.0 7 5.5 0.0 2.0 1 1 1 2 2 2 0 Ocular albinism type 1 protein DUF3439 PF11921.8 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_3 - 0.21 11.6 0.2 0.21 11.6 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3439) RXT2_N PF08595.11 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_3 - 0.57 10.2 1.7 7.8 6.5 0.1 2.5 1 1 2 3 3 3 0 RXT2-like, N-terminal DnaT PF17948.1 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_2 - 0.32 10.7 8.3 3.4 7.4 0.5 3.1 3 0 0 3 3 3 0 DnaT DNA-binding domain B-block_TFIIIC PF04182.12 NODE_53752_length_327_cov_96.592466_g45823_i0forward_frame_2 - 0.023 14.8 0.4 0.034 14.3 0.4 1.2 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HEAT_2 PF13646.6 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 1.1e-12 48.1 8.1 4.2e-12 46.3 8.1 1.7 1 1 0 1 1 1 1 HEAT repeats HEAT PF02985.22 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 1.1e-11 43.9 4.3 0.0013 18.8 0.1 3.4 3 0 0 3 3 3 3 HEAT repeat HEAT_EZ PF13513.6 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 2e-08 34.6 10.8 0.0008 19.9 2.0 3.2 1 1 2 3 3 3 3 HEAT-like repeat Cnd1 PF12717.7 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 6.8e-07 29.5 0.5 1.2e-05 25.4 0.1 2.2 1 1 1 2 2 2 1 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 1.1e-06 28.5 0.8 0.19 11.8 0.0 3.1 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.20 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 0.0015 17.2 0.1 0.052 12.1 0.0 1.4 1 1 1 2 2 2 2 Adaptin N terminal region Vac14_Fab1_bd PF12755.7 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 0.036 14.7 0.3 11 6.7 0.1 2.9 1 1 1 2 2 2 0 Vacuolar 14 Fab1-binding region V-ATPase_H_C PF11698.8 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 0.1 12.7 0.1 3.4 7.8 0.0 2.3 2 1 0 2 2 2 0 V-ATPase subunit H API5 PF05918.11 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 0.12 11.1 0.7 6.9 5.4 0.0 2.0 1 1 1 2 2 2 0 Apoptosis inhibitory protein 5 (API5) rRNA_processing PF08524.11 NODE_53746_length_327_cov_113.592466_g45817_i0reverse_frame_3 - 0.0013 18.8 4.5 0.0013 18.8 4.5 2.0 1 1 1 2 2 2 1 rRNA processing zf-Tim10_DDP PF02953.15 NODE_53745_length_327_cov_113.657534_g45816_i0forward_frame_2 - 0.0012 18.4 1.0 0.0079 15.8 1.0 2.0 1 1 0 1 1 1 1 Tim10/DDP family zinc finger PsaD PF02531.16 NODE_53744_length_327_cov_127.945205_g45815_i0reverse_frame_2 - 7.9e-05 22.2 0.0 0.00013 21.5 0.0 1.4 1 0 0 1 1 1 1 PsaD Methyltransf_11 PF08241.12 NODE_53739_length_327_cov_210.421233_g45810_i0reverse_frame_3 - 1.1e-06 29.2 0.0 1.4e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_53739_length_327_cov_210.421233_g45810_i0reverse_frame_3 - 2.7e-06 28.0 0.0 3.7e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_53739_length_327_cov_210.421233_g45810_i0reverse_frame_3 - 0.063 13.1 0.0 0.063 13.1 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain HNH_3 PF13392.6 NODE_53739_length_327_cov_210.421233_g45810_i0forward_frame_2 - 0.01 15.6 0.3 0.021 14.6 0.3 1.5 1 0 0 1 1 1 0 HNH endonuclease Penaeidin PF05927.11 NODE_53737_length_327_cov_215.267123_g45808_i0forward_frame_3 - 0.043 14.6 3.0 0.07 13.9 3.0 1.3 1 0 0 1 1 1 0 Penaeidin DUF1797 PF08796.10 NODE_53736_length_327_cov_217.476027_g45807_i0forward_frame_3 - 0.18 11.9 0.0 0.3 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1797) Ribosomal_60s PF00428.19 NODE_53734_length_327_cov_245.157534_g45805_i0reverse_frame_2 - 2.3e-16 60.2 7.9 2.7e-16 59.9 7.9 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein BRK PF07533.16 NODE_53734_length_327_cov_245.157534_g45805_i0reverse_frame_2 - 0.0011 18.5 0.0 0.002 17.7 0.0 1.4 1 0 0 1 1 1 1 BRK domain WBP-1 PF11669.8 NODE_53734_length_327_cov_245.157534_g45805_i0forward_frame_3 - 0.061 14.0 0.0 0.073 13.7 0.0 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 PABP PF00658.18 NODE_53729_length_327_cov_388.030822_g45801_i0forward_frame_2 - 1.1e-17 64.0 0.8 1.5e-17 63.6 0.8 1.2 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain Sperm_Ag_HE2 PF05324.13 NODE_53728_length_327_cov_425.534247_g45800_i0reverse_frame_3 - 0.11 13.0 0.5 2.8 8.5 0.0 2.1 2 0 0 2 2 2 0 Sperm antigen HE2 Sperm_Ag_HE2 PF05324.13 NODE_53727_length_327_cov_425.791096_g45799_i0reverse_frame_3 - 0.063 13.7 0.2 2.8 8.5 0.0 2.1 2 0 0 2 2 2 0 Sperm antigen HE2 PSI_PsaJ PF01701.18 NODE_53726_length_327_cov_1040.599315_g45798_i0reverse_frame_3 - 0.0014 19.1 0.1 0.0027 18.2 0.1 1.5 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ DUF1430 PF07242.11 ORF98912 - 0.027 14.7 2.6 0.027 14.7 2.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1430) DUF3755 PF12579.8 ORF98052 - 0.17 11.5 2.0 5.5 6.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3755) MFS_1 PF07690.16 ORF97582 - 4.3e-06 25.9 11.7 4.5e-06 25.8 11.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF97582 - 1.4 7.7 8.0 1.6 7.5 8.0 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter DUF1673 PF07895.11 ORF97499 - 0.035 13.8 0.0 0.04 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) Herpes_UL6 PF01763.16 ORF96488 - 0.0011 17.6 1.2 0.0013 17.4 1.2 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like DUF883 PF05957.13 ORF96488 - 0.093 13.3 1.0 0.16 12.6 0.9 1.5 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) AviRa PF11599.8 ORF96488 - 0.12 11.8 3.0 0.16 11.4 3.0 1.1 1 0 0 1 1 1 0 RRNA methyltransferase AviRa DUF4407 PF14362.6 ORF96488 - 0.16 11.3 3.3 0.19 11.1 3.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Peptidase_C3 PF00548.20 ORF96156 - 0.048 13.6 0.1 0.052 13.5 0.1 1.1 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) NQR2_RnfD_RnfE PF03116.15 ORF95574 - 0.027 13.9 1.4 0.03 13.7 1.4 1.1 1 0 0 1 1 1 0 NQR2, RnfD, RnfE family WI12 PF07107.11 ORF95533 - 0.097 12.8 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Wound-induced protein WI12 MORN PF02493.20 ORF95152 - 2.6e-19 67.9 16.5 5.4e-07 29.1 0.3 3.7 4 0 0 4 4 4 3 MORN repeat DUF1107 PF06526.12 ORF95152 - 0.21 11.5 2.0 3.4 7.7 0.3 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF1107) NQR2_RnfD_RnfE PF03116.15 ORF95144 - 0.027 13.9 1.4 0.03 13.7 1.4 1.1 1 0 0 1 1 1 0 NQR2, RnfD, RnfE family CENP-T_C PF15511.6 ORF94917 - 1.1e-08 35.1 0.2 1.4e-08 34.8 0.2 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TAF PF02969.17 ORF94917 - 2e-05 24.6 0.1 3.1e-05 24.0 0.1 1.4 1 1 0 1 1 1 1 TATA box binding protein associated factor (TAF) CBFD_NFYB_HMF PF00808.23 ORF94917 - 0.00015 22.0 0.1 0.00056 20.1 0.0 1.9 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF94917 - 0.00063 20.1 0.5 0.00092 19.6 0.5 1.4 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 ORF94917 - 0.00065 20.0 0.2 0.001 19.4 0.2 1.5 1 1 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 ORF94917 - 0.014 15.4 0.1 0.019 15.0 0.1 1.2 1 1 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF94917 - 0.067 13.7 0.1 0.1 13.1 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 ORF94917 - 0.11 12.5 0.0 0.64 10.1 0.0 1.8 2 0 0 2 2 2 0 Bromodomain associated HIGH_NTase1_ass PF16581.5 ORF94917 - 0.13 12.3 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Cytidyltransferase-related C-terminal region Ly49 PF08391.10 ORF94752 - 0.0032 17.8 0.0 0.0036 17.6 0.0 1.1 1 0 0 1 1 1 1 Ly49-like protein, N-terminal region CCT PF06203.14 ORF94406 - 2.7e-17 62.5 12.6 2.7e-17 62.5 12.6 2.2 3 0 0 3 3 3 1 CCT motif CBFB_NFYA PF02045.15 ORF94406 - 0.022 15.3 7.7 0.051 14.2 7.7 1.6 1 0 0 1 1 1 0 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B CCT_2 PF09425.10 ORF94406 - 0.023 14.6 3.7 0.023 14.6 3.7 2.6 3 0 0 3 3 3 0 Divergent CCT motif Citrate_ly_lig PF08218.11 ORF94406 - 0.057 13.1 0.1 0.059 13.0 0.1 1.3 1 0 0 1 1 1 0 Citrate lyase ligase C-terminal domain Sperm_Ag_HE2 PF05324.13 ORF94206 - 0.068 13.6 0.1 0.15 12.6 0.1 1.5 1 0 0 1 1 1 0 Sperm antigen HE2 Ion_trans PF00520.31 ORF94191 - 3.7e-08 32.9 8.3 4e-08 32.8 8.3 1.0 1 0 0 1 1 1 1 Ion transport protein Staphostatin_B PF09023.10 ORF9290 - 0.032 14.3 1.0 0.039 14.0 0.2 1.5 2 0 0 2 2 2 0 Staphostatin B Phasin PF05597.11 ORF91826 - 0.014 15.4 1.6 0.028 14.4 0.5 1.8 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) RNR_N PF08343.10 ORF91826 - 0.12 12.4 6.5 0.15 12.1 1.8 2.1 1 1 1 2 2 2 0 Ribonucleotide reductase N-terminal Oxysterol_BP PF01237.18 ORF91636 - 2.7e-18 66.0 0.0 2.8e-18 65.9 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein Ubiq-Cytc-red_N PF09165.10 ORF91636 - 0.13 13.2 0.0 0.21 12.5 0.0 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome c reductase 8 kDa, N-terminal Ribosomal_S22 PF08136.11 ORF90948 - 0.68 10.3 2.8 27 5.2 0.9 2.2 2 0 0 2 2 2 0 30S ribosomal protein subunit S22 family MFS_1 PF07690.16 ORF90833 - 0.044 12.7 0.3 0.067 12.1 0.3 1.4 1 1 0 1 1 1 0 Major Facilitator Superfamily Alpha-amylase_C PF02806.18 ORF90706 - 3.4e-09 37.0 0.0 4.5e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain HZS_alpha PF18582.1 ORF90706 - 0.061 13.8 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 Hydrazine synthase alpha subunit middle domain vATP-synt_E PF01991.18 ORF90015 - 0.29 10.5 0.0 0.36 10.2 0.0 1.1 1 0 0 1 1 1 0 ATP synthase (E/31 kDa) subunit YbfN PF13982.6 ORF89398 - 4.3e-49 164.8 6.5 5e-49 164.5 6.5 1.0 1 0 0 1 1 1 1 YbfN-like lipoprotein CLIP PF12032.8 ORF89398 - 0.31 11.4 2.8 0.47 10.8 1.6 1.9 1 1 1 2 2 2 0 Regulatory CLIP domain of proteinases EF-hand_6 PF13405.6 ORF87935 - 0.00029 20.5 0.0 0.02 14.8 0.0 2.4 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF87935 - 0.0021 18.4 0.0 0.022 15.2 0.0 2.3 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF87935 - 0.0046 16.4 0.0 0.029 13.9 0.0 2.2 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF87935 - 0.0055 16.1 0.0 0.032 13.7 0.0 2.0 2 0 0 2 2 2 1 EF hand ThiP_synth PF10120.9 ORF87773 - 0.12 12.0 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Thiamine-phosphate synthase Aldo_ket_red PF00248.21 ORF87400 - 1.5e-09 37.5 0.0 1.7e-09 37.3 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Frankia_peptide PF14407.6 ORF87400 - 0.06 13.3 0.2 0.2 11.7 0.1 1.8 2 0 0 2 2 2 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. AP_endonuc_2 PF01261.24 ORF8735 - 3.6e-07 29.8 0.8 4.2e-07 29.6 0.8 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Scytalone_dh PF02982.14 ORF8735 - 0.08 12.7 0.1 0.098 12.4 0.1 1.1 1 0 0 1 1 1 0 Scytalone dehydratase RabGAP-TBC PF00566.18 ORF86814 - 2.6e-07 30.5 0.2 3.7e-07 30.0 0.2 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain ProRS-C_1 PF09180.11 ORF85806 - 2.1e-24 85.5 0.0 2.6e-24 85.2 0.0 1.1 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal LisH PF08513.11 ORF8481 - 0.00063 19.6 0.0 0.0012 18.7 0.0 1.5 1 0 0 1 1 1 1 LisH DUF3038 PF11237.8 ORF8481 - 0.028 14.5 0.1 0.033 14.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) RapH_N PF18801.1 ORF8481 - 0.092 12.8 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 response regulator aspartate phosphatase H, N terminal Polyoma_agno PF01736.16 ORF84397 - 0.0026 17.4 0.0 0.0064 16.2 0.0 1.7 1 1 0 1 1 1 1 Polyomavirus agnoprotein Robl_LC7 PF03259.17 ORF82691 - 1.3e-09 37.7 0.0 1.4e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain LAMTOR5 PF16672.5 ORF82691 - 0.085 12.8 0.1 0.17 11.8 0.1 1.5 1 1 0 1 1 1 0 Ragulator complex protein LAMTOR5 DUF1518 PF07469.12 ORF82325 - 3.7 8.0 11.4 6 7.3 0.6 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1518) SPG48 PF14764.6 ORF82235 - 0.0071 16.8 0.2 0.0092 16.4 0.2 1.3 1 0 0 1 1 1 1 AP-5 complex subunit, vesicle trafficking HECT PF00632.25 ORF82173 - 4.8e-30 105.1 0.1 5.2e-30 105.0 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) UCR_Fe-S_N PF10399.9 ORF82173 - 0.2 11.1 0.0 0.31 10.4 0.0 1.3 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NQR2_RnfD_RnfE PF03116.15 ORF81606 - 0.027 13.9 1.4 0.03 13.7 1.4 1.1 1 0 0 1 1 1 0 NQR2, RnfD, RnfE family PCRF PF03462.18 ORF8021 - 1.1 9.0 18.4 0.7 9.7 7.2 1.8 1 1 1 2 2 2 0 PCRF domain HBM PF16591.5 ORF8021 - 1.5 8.2 27.5 0.36 10.2 12.5 2.0 1 1 1 2 2 2 0 Helical bimodular sensor domain Lyase_8_N PF08124.11 ORF8021 - 2.3 7.1 10.4 2.6 6.9 10.4 1.2 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain tRNA-synt_His PF13393.6 ORF8021 - 6.1 6.0 14.1 14 4.9 14.1 1.5 1 1 0 1 1 1 0 Histidyl-tRNA synthetase Allexi_40kDa PF05549.11 ORF8021 - 7.9 5.9 17.5 40 3.6 17.3 1.8 1 1 0 1 1 1 0 Allexivirus 40kDa protein T6SS_VipA PF05591.12 ORF8021 - 9.1 6.1 28.2 2.2 8.1 11.1 2.1 1 1 1 2 2 2 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 NuA4 PF09340.10 ORF80094 - 0.032 14.1 0.1 0.69 9.8 0.0 2.1 2 0 0 2 2 2 0 Histone acetyltransferase subunit NuA4 bZIP_C PF12498.8 ORF79580 - 0.035 15.1 1.5 0.044 14.8 1.5 1.1 1 0 0 1 1 1 0 Basic leucine-zipper C terminal Seryl_tRNA_N PF02403.22 ORF794 - 0.19 12.0 4.5 0.24 11.6 4.5 1.2 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Glu_syn_central PF04898.14 ORF79064 - 0.013 15.0 0.0 0.013 15.0 0.0 1.0 1 0 0 1 1 1 0 Glutamate synthase central domain TMEM52 PF14979.6 ORF78083 - 0.0016 18.4 0.0 0.0018 18.2 0.0 1.2 1 0 0 1 1 1 1 Transmembrane 52 Sperm_Ag_HE2 PF05324.13 ORF77873 - 0.068 13.6 0.1 0.15 12.6 0.1 1.5 1 0 0 1 1 1 0 Sperm antigen HE2 RCC1_2 PF13540.6 ORF75911 - 2.4e-23 81.3 21.6 3.4e-12 45.8 3.2 3.1 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF75911 - 0.016 15.8 25.4 0.38 11.4 0.2 4.7 3 2 1 4 4 4 0 Regulator of chromosome condensation (RCC1) repeat FliG_N PF14842.6 ORF75542 - 0.02 15.4 0.7 0.026 15.0 0.2 1.5 2 0 0 2 2 2 0 FliG N-terminal domain Nairo_nucleo PF02477.15 ORF75542 - 0.045 12.6 1.5 0.053 12.3 1.5 1.1 1 0 0 1 1 1 0 Nucleocapsid N protein CorA PF01544.18 ORF75542 - 0.048 13.0 7.2 0.054 12.8 7.2 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF5486 PF17588.2 ORF75542 - 0.071 13.0 0.5 0.14 12.1 0.1 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5486) Retrotrans_gag PF03732.17 ORF75542 - 0.085 13.1 1.5 0.32 11.3 0.6 2.2 1 1 1 2 2 2 0 Retrotransposon gag protein DUF1690 PF07956.11 ORF75542 - 0.11 12.9 4.4 0.18 12.2 4.5 1.4 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) KIP1 PF07765.12 ORF75542 - 0.18 11.9 7.3 0.2 11.8 6.8 1.4 1 1 0 1 1 1 0 KIP1-like protein Fib_alpha PF08702.10 ORF75542 - 0.5 10.5 7.0 0.48 10.6 2.9 2.2 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family FliD_N PF02465.18 ORF75542 - 0.7 10.6 5.1 9.1 7.1 0.9 2.4 1 1 2 3 3 3 0 Flagellar hook-associated protein 2 N-terminus AAA_23 PF13476.6 ORF75542 - 3.7 8.0 11.8 4.5 7.7 11.8 1.1 1 0 0 1 1 1 0 AAA domain Pkinase_C PF00433.24 ORF74861 - 0.065 14.0 0.5 0.16 12.7 0.2 1.7 1 1 1 2 2 2 0 Protein kinase C terminal domain DASH_Ask1 PF08655.10 ORF74825 - 0.088 12.7 0.1 0.19 11.6 0.1 1.6 1 1 0 1 1 1 0 DASH complex subunit Ask1 ABC2_membrane_3 PF12698.7 ORF74058 - 1.6 7.7 8.1 1.8 7.6 8.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein LptF_LptG PF03739.14 ORF74058 - 4.6 6.0 6.7 0.27 10.0 0.7 1.7 2 0 0 2 2 2 0 Lipopolysaccharide export system permease LptF/LptG S_locus_glycop PF00954.20 ORF73767 - 0.014 15.9 0.0 0.019 15.5 0.0 1.1 1 0 0 1 1 1 0 S-locus glycoprotein domain CPP1-like PF11833.8 ORF73767 - 0.048 13.3 0.0 0.056 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Deltameth_res PF16020.5 ORF7219 - 0.0073 16.2 0.1 0.014 15.2 0.1 1.5 1 0 0 1 1 1 1 Deltamethrin resistance HpaB PF03241.13 ORF7219 - 0.024 13.7 0.0 0.033 13.3 0.0 1.1 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase C terminal Aldolase_II PF00596.21 ORF71565 - 0.03 14.3 0.0 0.032 14.2 0.0 1.1 1 0 0 1 1 1 0 Class II Aldolase and Adducin N-terminal domain Aminotran_5 PF00266.19 ORF70103 - 4.4e-11 42.4 0.0 5e-11 42.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V ANTAR PF03861.14 ORF69773 - 0.036 13.9 0.0 0.087 12.7 0.0 1.6 1 1 0 1 1 1 0 ANTAR domain XPC-binding PF09280.11 ORF69617 - 0.022 14.5 1.5 0.045 13.5 1.5 1.4 1 0 0 1 1 1 0 XPC-binding domain Enkurin PF13864.6 ORF69617 - 0.023 15.1 1.6 0.042 14.3 1.6 1.6 1 1 0 1 1 1 0 Calmodulin-binding Ly49 PF08391.10 ORF69348 - 0.0032 17.8 0.0 0.0036 17.6 0.0 1.1 1 0 0 1 1 1 1 Ly49-like protein, N-terminal region DUF4397 PF14344.6 ORF6867 - 0.33 11.8 9.3 0.43 11.4 9.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4397) Mucin PF01456.17 ORF6867 - 0.9 9.5 32.6 1.2 9.1 32.6 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF4126 PF13548.6 ORF6867 - 2.8 7.6 15.5 3 7.5 15.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) PfkB PF00294.24 ORF67652 - 3.6e-09 36.4 0.2 4.3e-09 36.1 0.2 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phage_holin_2_3 PF16080.5 ORF67652 - 0.13 12.0 0.4 0.2 11.4 0.4 1.2 1 0 0 1 1 1 0 Bacteriophage holin family HP1 DUF2517 PF10725.9 ORF67088 - 0.033 14.0 0.1 0.067 13.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2517) Sulfotransfer_2 PF03567.14 ORF67088 - 0.096 12.6 0.5 0.11 12.4 0.5 1.3 1 1 0 1 1 1 0 Sulfotransferase family Peptidase_S15 PF02129.18 ORF67088 - 0.11 12.0 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Cation_efflux PF01545.21 ORF67024 - 1.6e-23 83.5 4.7 1.8e-23 83.3 4.7 1.0 1 0 0 1 1 1 1 Cation efflux family Oxysterol_BP PF01237.18 ORF6697 - 2.7e-18 66.0 0.0 2.8e-18 65.9 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein Ubiq-Cytc-red_N PF09165.10 ORF6697 - 0.13 13.2 0.0 0.21 12.5 0.0 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome c reductase 8 kDa, N-terminal Col_cuticle_N PF01484.17 ORF66633 - 0.019 15.0 0.3 0.032 14.3 0.3 1.4 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain IpaC_SipC PF09599.10 ORF66633 - 0.051 13.1 0.1 0.054 13.0 0.1 1.1 1 0 0 1 1 1 0 Salmonella-Shigella invasin protein C (IpaC_SipC) Apo-CIII PF05778.12 ORF66595 - 0.075 12.7 0.4 0.15 11.8 0.4 1.5 1 0 0 1 1 1 0 Apolipoprotein CIII (Apo-CIII) NICE-1 PF15845.5 ORF65088 - 0.034 14.9 0.8 0.048 14.4 0.8 1.5 1 1 0 1 1 1 0 Cysteine-rich C-terminal 1 family CRAL_TRIO_N PF03765.15 ORF64959 - 5.1e-08 33.0 0.2 9.6e-08 32.1 0.2 1.6 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain ABC-3 PF00950.17 ORF64955 - 0.071 12.6 0.1 0.085 12.3 0.1 1.1 1 0 0 1 1 1 0 ABC 3 transport family DUF3482 PF11981.8 ORF63646 - 0.028 13.8 0.1 0.032 13.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) EF-hand_1 PF00036.32 ORF63572 - 1.3e-19 68.2 4.3 3.4e-10 38.7 2.2 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF63572 - 2.1e-17 63.3 1.3 3.1e-17 62.8 1.3 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF63572 - 2.9e-17 62.3 2.1 8.2e-11 41.6 0.5 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF63572 - 4.4e-15 54.4 4.6 5.9e-07 28.7 0.9 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF63572 - 5.2e-15 54.0 1.0 6e-07 28.9 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain p25-alpha PF05517.12 ORF63572 - 3.1e-05 24.2 0.1 3.8e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 p25-alpha EF-hand_4 PF12763.7 ORF63572 - 0.00017 21.5 1.0 0.00036 20.4 0.4 1.6 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF63572 - 0.0029 17.9 0.2 0.0078 16.5 0.2 1.6 1 1 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF63572 - 0.03 14.6 0.2 0.13 12.6 0.2 1.8 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF63572 - 0.052 13.7 0.7 0.14 12.4 0.7 1.8 1 1 0 1 1 1 0 Dockerin type I domain Caleosin PF05042.13 ORF63572 - 0.11 12.4 0.2 1.4 8.8 0.1 1.9 1 1 1 2 2 2 0 Caleosin related protein GAPES1 PF17155.4 ORF63572 - 0.13 11.6 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain PRRSV_2b PF07069.11 ORF62795 - 0.24 11.9 4.9 0.25 11.8 2.7 1.9 1 1 1 2 2 2 0 Porcine reproductive and respiratory syndrome virus 2b Cyclin_N2 PF16500.5 ORF62004 - 0.038 14.7 1.3 0.048 14.4 1.3 1.1 1 0 0 1 1 1 0 N-terminal region of cyclin_N CPBP PF02517.16 ORF61872 - 3.9e-06 27.1 2.6 5.1e-06 26.8 2.6 1.3 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease zf-LITAF-like PF10601.9 ORF60226 - 0.0047 17.2 17.9 0.0062 16.8 17.9 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain MtrD PF04207.12 ORF58869 - 0.054 13.2 0.7 0.07 12.8 0.7 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit D UPF0060 PF02694.15 ORF58066 - 5.6e-49 164.8 11.8 6.1e-49 164.7 11.8 1.0 1 0 0 1 1 1 1 Uncharacterised BCR, YnfA/UPF0060 family DUF1799 PF08809.11 ORF57529 - 0.012 15.8 0.0 0.019 15.2 0.0 1.3 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) SGL PF08450.12 ORF57250 - 8.4e-05 22.3 0.0 8.9e-05 22.2 0.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region eIF-5a PF01287.20 ORF57250 - 0.11 12.6 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold DUF1192 PF06698.11 ORF56528 - 0.12 12.5 1.4 0.19 11.8 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) DUF667 PF05018.13 ORF56217 - 3e-44 151.0 0.6 3.3e-44 150.8 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) DUF3755 PF12579.8 ORF55282 - 0.17 11.5 2.0 5.5 6.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3755) Alpha-amyl_C2 PF07821.12 ORF54523 - 0.0058 16.8 0.0 0.022 15.0 0.0 1.9 1 1 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain DUF748 PF05359.11 ORF54523 - 0.11 12.7 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF748) Arteri_nucleo PF01481.16 ORF53437 - 0.0074 16.6 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 Arterivirus nucleocapsid protein DUF4041 PF13250.6 ORF53433 - 0.0075 16.1 1.2 0.019 14.9 1.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4041) MORN PF02493.20 ORF5301 - 4e-22 76.7 22.0 1.6e-08 33.9 1.4 5.2 5 0 0 5 5 5 5 MORN repeat GluR_Homer-bdg PF10606.9 ORF51904 - 0.11 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor DUF2457 PF10446.9 ORF50603 - 6.6 5.8 9.3 8 5.5 9.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) HTH_Crp_2 PF13545.6 ORF49313 - 3.6e-17 62.1 0.1 4.6e-17 61.7 0.1 1.1 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Crp PF00325.20 ORF49313 - 2.6e-16 58.9 0.5 2.6e-16 58.9 0.5 1.6 2 0 0 2 2 2 1 Bacterial regulatory proteins, crp family MarR_2 PF12802.7 ORF49313 - 0.0025 17.6 0.0 0.004 17.0 0.0 1.5 1 1 0 1 1 1 1 MarR family HTH_23 PF13384.6 ORF49313 - 0.069 13.0 0.0 0.59 10.0 0.0 2.1 2 0 0 2 2 2 0 Homeodomain-like domain SPG48 PF14764.6 ORF48743 - 0.0075 16.7 0.2 0.01 16.3 0.2 1.3 1 0 0 1 1 1 1 AP-5 complex subunit, vesicle trafficking MORN PF02493.20 ORF48580 - 1.2e-14 53.3 16.4 5.7e-08 32.2 0.7 3.7 4 0 0 4 4 4 3 MORN repeat Tim17 PF02466.19 ORF47295 - 1.5e-22 80.1 1.0 1.6e-22 79.9 1.0 1.0 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Ribosomal_L35Ae PF01247.18 ORF46722 - 5.4e-31 106.6 0.1 6.2e-31 106.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 ORF46722 - 0.0012 19.0 0.1 0.98 9.7 0.0 2.1 2 0 0 2 2 2 2 RimM N-terminal domain DUF2080 PF09853.9 ORF46722 - 0.0077 16.0 0.6 0.37 10.6 0.1 2.4 1 1 1 2 2 2 2 Putative transposon-encoded protein (DUF2080) SR-25 PF10500.9 ORF45995 - 0.54 9.8 11.6 0.64 9.6 11.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3731 PF12531.8 ORF45931 - 0.054 13.3 0.1 0.066 13.0 0.1 1.0 1 0 0 1 1 1 0 DNA-K related protein ALMT PF11744.8 ORF45931 - 0.075 11.9 0.1 0.088 11.6 0.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter MFS_1 PF07690.16 ORF45059 - 2.4e-06 26.7 0.0 2.4e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily PROL5-SMR PF15621.6 ORF45059 - 0.0032 18.0 0.1 0.005 17.4 0.1 1.5 1 1 0 1 1 1 1 Proline-rich submaxillary gland androgen-regulated family MFS_1 PF07690.16 ORF45044 - 3e-05 23.1 10.7 6.4e-05 22.0 9.1 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF45044 - 0.00062 18.4 4.0 0.00076 18.1 4.0 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein DUF1624 PF07786.12 ORF45044 - 0.018 14.6 4.0 0.089 12.3 4.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1624) VIT1 PF01988.19 ORF45044 - 0.17 11.7 6.8 0.21 11.4 6.8 1.1 1 0 0 1 1 1 0 VIT family DUF4231 PF14015.6 ORF45044 - 0.3 11.6 2.7 0.6 10.6 2.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) Helicase_C PF00271.31 ORF44345 - 8.9e-29 100.1 0.2 9.7e-29 100.0 0.2 1.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PTS_IIB PF02302.17 ORF44000 - 2e-17 63.7 1.2 2.3e-17 63.4 1.2 1.1 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit Methyltransf_30 PF05430.11 ORF44000 - 0.13 12.1 0.1 0.28 11.1 0.0 1.5 1 1 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase Ly49 PF08391.10 ORF43759 - 0.0032 17.8 0.0 0.0036 17.6 0.0 1.1 1 0 0 1 1 1 1 Ly49-like protein, N-terminal region DUF3731 PF12531.8 ORF42458 - 0.13 12.0 0.0 0.16 11.8 0.0 1.0 1 0 0 1 1 1 0 DNA-K related protein MFS_1 PF07690.16 ORF42365 - 3e-05 23.1 10.7 6.4e-05 22.0 9.1 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF42365 - 0.00062 18.4 4.0 0.00076 18.1 4.0 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein DUF1624 PF07786.12 ORF42365 - 0.018 14.6 4.0 0.089 12.3 4.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1624) VIT1 PF01988.19 ORF42365 - 0.17 11.7 6.8 0.21 11.4 6.8 1.1 1 0 0 1 1 1 0 VIT family DUF4231 PF14015.6 ORF42365 - 0.3 11.6 2.7 0.6 10.6 2.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) EssA PF10661.9 ORF4145 - 0.045 13.6 6.8 0.052 13.4 6.8 1.0 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA Ribosomal_L35Ae PF01247.18 ORF41138 - 5.4e-31 106.6 0.1 6.2e-31 106.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 ORF41138 - 0.0012 19.0 0.1 0.98 9.7 0.0 2.1 2 0 0 2 2 2 2 RimM N-terminal domain DUF2080 PF09853.9 ORF41138 - 0.0077 16.0 0.6 0.37 10.6 0.1 2.4 1 1 1 2 2 2 2 Putative transposon-encoded protein (DUF2080) DUF630 PF04783.12 ORF40345 - 0.24 11.6 2.7 0.43 10.8 0.2 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF630) DUF3085 PF11284.8 ORF39650 - 0.0012 19.1 0.0 0.0017 18.6 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3085) LSM PF01423.22 ORF39492 - 1.9e-18 65.9 1.8 2.3e-18 65.6 1.8 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 ORF39492 - 0.012 15.8 0.6 0.016 15.4 0.6 1.2 1 0 0 1 1 1 0 Ataxin 2 SM domain Tail_tube PF10618.9 ORF39492 - 0.014 15.3 0.3 0.023 14.6 0.3 1.3 1 0 0 1 1 1 0 Phage tail tube protein BPL_C PF02237.17 ORF39492 - 0.13 12.2 1.5 0.19 11.6 0.9 1.6 2 0 0 2 2 2 0 Biotin protein ligase C terminal domain PPR_2 PF13041.6 ORF38810 - 1e-05 25.6 0.0 0.0026 17.9 0.0 2.1 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF38810 - 0.00028 20.9 0.0 0.00037 20.5 0.0 1.3 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 ORF38810 - 0.011 16.0 0.0 0.064 13.5 0.0 2.1 2 0 0 2 2 2 0 PPR repeat PPR_1 PF12854.7 ORF38810 - 0.12 12.0 0.0 0.55 10.0 0.0 2.0 2 0 0 2 2 2 0 PPR repeat PPR_long PF17177.4 ORF38810 - 0.13 11.6 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP ADH_zinc_N_2 PF13602.6 ORF38502 - 0.098 13.7 0.0 0.099 13.7 0.0 1.3 1 1 0 1 1 1 0 Zinc-binding dehydrogenase GIIM PF08388.11 ORF3804 - 0.038 14.0 1.6 0.059 13.4 1.6 1.5 1 1 0 1 1 1 0 Group II intron, maturase-specific domain RRM_1 PF00076.22 ORF3804 - 0.089 12.6 0.2 0.14 12.0 0.2 1.4 1 1 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) UCH PF00443.29 ORF3804 - 0.18 11.3 0.2 0.19 11.2 0.2 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase PARP PF00644.20 ORF37580 - 0.001 18.7 0.0 0.0076 15.9 0.0 1.9 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain RNA_pol_Rpb1_4 PF05000.17 ORF36064 - 1.7 8.6 8.4 2 8.4 8.0 1.3 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 4 Hid1 PF12722.7 ORF36064 - 7 4.6 11.5 7.6 4.5 11.5 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Nepo_coat PF03391.15 ORF36028 - 0.08 12.4 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Nepovirus coat protein, central domain ICL PF00463.21 ORF36015 - 7.6e-30 103.9 0.0 8.2e-30 103.8 0.0 1.0 1 0 0 1 1 1 1 Isocitrate lyase family GA-like PF17573.2 ORF36015 - 0.0053 16.7 0.1 0.045 13.7 0.0 2.0 2 0 0 2 2 2 1 GA-like domain FixH PF05751.11 ORF34354 - 0.17 11.9 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 FixH Arteri_nucleo PF01481.16 ORF33618 - 0.0074 16.6 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 Arterivirus nucleocapsid protein Arteri_nucleo PF01481.16 ORF32574 - 0.0074 16.6 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 Arterivirus nucleocapsid protein NuA4 PF09340.10 ORF32325 - 3.8e-20 71.5 0.8 4.8e-20 71.2 0.8 1.1 1 0 0 1 1 1 1 Histone acetyltransferase subunit NuA4 T2SSS_2 PF16549.5 ORF32325 - 0.11 12.5 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS) pilotin, S protein Nas2_N PF18265.1 ORF32325 - 0.14 12.1 0.1 0.2 11.6 0.1 1.3 1 0 0 1 1 1 0 Nas2 N_terminal domain DUF1743 PF08489.11 ORF31406 - 0.044 13.8 0.1 0.053 13.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1743) GSCFA PF08885.11 ORF31356 - 0.016 14.8 0.1 0.018 14.7 0.1 1.1 1 0 0 1 1 1 0 GSCFA family K_channel_TID PF07941.11 ORF30720 - 0.0067 16.9 2.9 0.0099 16.3 2.9 1.2 1 0 0 1 1 1 1 Potassium channel Kv1.4 tandem inactivation domain DUF4719 PF15843.5 ORF30720 - 0.055 13.6 1.9 0.071 13.2 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) ApoLp-III PF07464.11 ORF30356 - 7.2e-05 22.9 5.1 8.8e-05 22.6 5.1 1.1 1 0 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) DUF4164 PF13747.6 ORF30356 - 0.00061 20.0 2.5 0.00074 19.8 2.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) DUF1351 PF07083.11 ORF30356 - 0.00092 19.0 0.4 0.0011 18.8 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1351) DUF4618 PF15397.6 ORF30356 - 0.0023 17.4 3.6 0.01 15.3 3.6 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4618) Tho2 PF11262.8 ORF30356 - 0.0024 17.1 3.9 0.0028 16.9 3.9 1.2 1 0 0 1 1 1 1 Transcription factor/nuclear export subunit protein 2 HIP1_clath_bdg PF16515.5 ORF30356 - 0.0026 18.3 9.3 0.0044 17.6 9.1 1.5 1 1 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 TMPIT PF07851.13 ORF30356 - 0.0042 16.4 6.5 0.0045 16.3 6.5 1.1 1 0 0 1 1 1 1 TMPIT-like protein Leu_zip PF15294.6 ORF30356 - 0.0045 16.5 5.5 0.0052 16.3 5.5 1.2 1 0 0 1 1 1 1 Leucine zipper WXG100 PF06013.12 ORF30356 - 0.0046 17.2 3.0 0.015 15.5 1.3 2.2 1 1 1 2 2 2 1 Proteins of 100 residues with WXG LOH1CR12 PF10158.9 ORF30356 - 0.0054 16.8 2.2 0.0059 16.6 1.4 1.4 1 1 0 1 1 1 1 Tumour suppressor protein Lectin_N PF03954.14 ORF30356 - 0.0067 16.2 4.8 0.0067 16.2 4.8 1.4 1 1 0 1 1 1 1 Hepatic lectin, N-terminal domain SOAR PF16533.5 ORF30356 - 0.0087 16.0 6.2 0.031 14.2 4.2 2.1 1 1 1 2 2 2 2 STIM1 Orai1-activating region DUF3584 PF12128.8 ORF30356 - 0.012 13.2 6.2 0.013 13.1 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Spc7 PF08317.11 ORF30356 - 0.017 14.0 7.6 0.027 13.4 7.6 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF812 PF05667.11 ORF30356 - 0.018 14.0 6.7 0.031 13.2 6.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF812) DUF1319 PF07028.11 ORF30356 - 0.018 15.2 2.7 0.65 10.2 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1319) COG2 PF06148.11 ORF30356 - 0.019 15.1 6.7 0.055 13.6 0.6 2.0 1 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 ALMT PF11744.8 ORF30356 - 0.028 13.3 5.0 0.03 13.2 5.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter FH2 PF02181.23 ORF30356 - 0.03 13.5 3.5 0.035 13.2 3.5 1.0 1 0 0 1 1 1 0 Formin Homology 2 Domain Filament PF00038.21 ORF30356 - 0.032 13.8 6.9 0.022 14.3 5.2 1.5 1 1 0 1 1 1 0 Intermediate filament protein HalX PF08663.10 ORF30356 - 0.035 14.4 2.3 0.13 12.6 1.3 2.2 1 1 2 3 3 2 0 HalX domain Tweety PF04906.13 ORF30356 - 0.04 12.6 5.6 0.065 11.9 1.0 2.0 1 1 1 2 2 2 0 Tweety TACC_C PF05010.14 ORF30356 - 0.053 13.3 7.1 0.064 13.0 7.1 1.2 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal KxDL PF10241.9 ORF30356 - 0.06 13.6 10.5 0.13 12.6 2.5 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein Tropomyosin PF00261.20 ORF30356 - 0.071 12.5 5.2 0.23 10.8 1.0 2.0 2 0 0 2 2 2 0 Tropomyosin APG6_N PF17675.1 ORF30356 - 0.076 13.5 6.9 0.086 13.4 6.9 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Cnn_1N PF07989.11 ORF30356 - 0.077 13.2 1.5 0.2 11.8 1.5 1.9 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 CLZ PF16526.5 ORF30356 - 0.083 13.3 6.4 0.12 12.7 1.7 2.2 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels TPR_MLP1_2 PF07926.12 ORF30356 - 0.09 12.8 10.5 0.84 9.7 10.5 1.9 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein IFT57 PF10498.9 ORF30356 - 0.11 11.4 8.1 0.12 11.3 8.1 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 EzrA PF06160.12 ORF30356 - 0.12 10.5 4.7 0.15 10.2 4.7 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA OmpH PF03938.14 ORF30356 - 0.12 12.7 2.5 0.19 12.1 2.5 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Prefoldin_2 PF01920.20 ORF30356 - 0.12 12.3 6.2 1.3 9.0 0.5 2.3 2 0 0 2 2 2 0 Prefoldin subunit DUF1043 PF06295.12 ORF30356 - 0.12 12.3 8.5 3.6 7.6 8.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) Occludin_ELL PF07303.13 ORF30356 - 0.15 12.8 5.9 0.33 11.7 4.8 1.9 1 1 1 2 2 2 0 Occludin homology domain Baculo_PEP_C PF04513.12 ORF30356 - 0.17 12.0 2.0 1.8 8.6 2.1 1.9 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus FlxA PF14282.6 ORF30356 - 0.17 11.9 7.2 0.49 10.4 7.2 1.8 1 1 0 1 1 1 0 FlxA-like protein DUF948 PF06103.11 ORF30356 - 0.18 12.1 0.9 0.4 11.0 0.9 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Muted PF14942.6 ORF30356 - 0.23 11.8 8.6 0.78 10.1 3.1 1.9 1 1 0 1 1 1 0 Organelle biogenesis, Muted-like protein Golgin_A5 PF09787.9 ORF30356 - 0.23 10.9 10.6 0.28 10.6 10.6 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 YlqD PF11068.8 ORF30356 - 0.23 11.8 6.4 0.33 11.3 6.4 1.3 1 0 0 1 1 1 0 YlqD protein DUF1664 PF07889.12 ORF30356 - 0.28 11.2 6.2 2.6 8.1 1.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) ADIP PF11559.8 ORF30356 - 0.29 11.2 10.6 0.38 10.8 10.6 1.2 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding MCPsignal PF00015.21 ORF30356 - 0.31 10.8 3.9 0.37 10.6 3.9 1.1 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain RmuC PF02646.16 ORF30356 - 0.31 10.1 7.7 0.31 10.1 1.0 2.0 1 1 1 2 2 2 0 RmuC family PRKG1_interact PF15898.5 ORF30356 - 0.34 11.8 11.6 1.4 9.8 2.1 2.1 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain GrpE PF01025.19 ORF30356 - 0.38 10.4 3.8 2.3 7.9 3.8 2.0 1 1 0 1 1 1 0 GrpE FapA PF03961.13 ORF30356 - 0.39 9.3 3.5 0.41 9.2 3.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A FAP206 PF12018.8 ORF30356 - 0.51 9.8 4.8 0.68 9.4 4.8 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF148 PF02520.17 ORF30356 - 0.59 10.3 5.4 0.67 10.1 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function DUF148 Prefoldin PF02996.17 ORF30356 - 0.66 9.9 4.9 4.2 7.3 0.5 2.6 1 1 3 4 4 4 0 Prefoldin subunit Exonuc_VII_L PF02601.15 ORF30356 - 0.66 9.5 7.9 0.71 9.4 7.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit MscS_porin PF12795.7 ORF30356 - 0.77 9.3 8.3 4.3 6.8 8.3 1.8 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain SKA2 PF16740.5 ORF30356 - 0.85 9.4 6.4 2.4 8.0 1.0 2.1 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 DUF745 PF05335.13 ORF30356 - 0.91 9.2 5.2 6.4 6.5 3.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF745) SOGA PF11365.8 ORF30356 - 0.96 10.6 6.9 0.56 11.4 1.1 2.1 1 1 1 2 2 2 0 Protein SOGA CENP-F_leu_zip PF10473.9 ORF30356 - 1.2 9.2 9.7 1.1 9.3 2.1 2.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4407 PF14362.6 ORF30356 - 1.2 8.5 4.0 1.4 8.2 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ApoO PF09769.9 ORF30356 - 1.3 9.0 6.7 8.3 6.4 2.5 2.4 1 1 1 2 2 2 0 Apolipoprotein O DDHD PF02862.17 ORF30356 - 1.3 9.1 6.6 1.5 8.9 6.6 1.0 1 0 0 1 1 1 0 DDHD domain Jnk-SapK_ap_N PF09744.9 ORF30356 - 1.4 9.1 11.0 1.9 8.7 11.0 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Uso1_p115_C PF04871.13 ORF30356 - 3 8.2 8.2 10 6.5 8.2 1.8 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Spc24 PF08286.11 ORF30356 - 3.1 8.1 8.0 1.7 8.9 1.1 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 CENP-H PF05837.12 ORF30356 - 3.5 8.1 9.6 28 5.2 9.6 2.0 1 1 0 1 1 1 0 Centromere protein H (CENP-H) Rho_Binding PF08912.11 ORF30356 - 8 7.4 7.8 8.5 7.3 1.5 2.5 1 1 2 3 3 3 0 Rho Binding Kinase-like PF14531.6 ORF2935 - 0.0035 16.7 0.0 0.0042 16.4 0.0 1.0 1 0 0 1 1 1 1 Kinase-like DUF3450 PF11932.8 ORF27574 - 0.11 11.8 2.1 0.12 11.6 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Transformer PF06495.11 ORF26856 - 0.12 12.4 12.8 0.15 12.2 12.8 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein Tim17 PF02466.19 ORF25920 - 1.2e-08 35.3 0.8 1.9e-08 34.6 0.2 1.6 1 1 1 2 2 2 1 Tim17/Tim22/Tim23/Pmp24 family Complex1_51K PF01512.17 ORF25920 - 0.012 15.5 0.1 0.015 15.2 0.1 1.1 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase 51 Kd subunit CTNNBL PF08216.11 ORF25726 - 0.063 13.5 0.5 0.8 9.9 0.1 2.1 2 1 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear PGA2 PF07543.12 ORF25726 - 2.2 8.3 7.1 3.2 7.7 7.1 1.3 1 1 0 1 1 1 0 Protein trafficking PGA2 DUF4554 PF15091.6 ORF256 - 0.11 11.3 0.3 4.1 6.2 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4554) Peptidase_M99_m PF17130.4 ORF25471 - 0.073 13.0 0.1 0.099 12.6 0.1 1.2 1 0 0 1 1 1 0 beta-barrel domain of carboxypeptidase M99 ESR1_C PF12743.7 ORF25327 - 1.3 8.9 5.2 3.8 7.4 0.2 2.2 2 0 0 2 2 2 0 Oestrogen-type nuclear receptor final C-terminal Selenoprotein_S PF06936.11 ORF23700 - 0.022 14.6 0.1 0.025 14.4 0.1 1.2 1 0 0 1 1 1 0 Selenoprotein S (SelS) MRAP PF15183.6 ORF23700 - 0.14 12.1 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family TMEM52 PF14979.6 ORF23700 - 0.78 9.6 3.1 1.1 9.2 3.1 1.3 1 0 0 1 1 1 0 Transmembrane 52 Y_phosphatase PF00102.27 ORF22219 - 7.3e-07 29.0 0.3 1.2e-06 28.3 0.1 1.5 2 0 0 2 2 2 1 Protein-tyrosine phosphatase ATP-synt_A PF00119.20 ORF21194 - 0.016 15.1 0.7 0.019 14.9 0.7 1.0 1 0 0 1 1 1 0 ATP synthase A chain GluR_Homer-bdg PF10606.9 ORF20259 - 0.064 13.5 6.0 0.16 12.2 6.0 1.6 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor UBM PF14377.6 ORF18653 - 0.11 12.0 0.2 0.2 11.2 0.2 1.5 1 0 0 1 1 1 0 Ubiquitin binding region Memo PF01875.17 ORF18523 - 1.3e-26 93.3 0.0 1.5e-26 93.2 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein eIF3g PF12353.8 ORF18194 - 0.92 9.9 4.8 0.48 10.8 1.8 1.8 1 1 0 2 2 2 0 Eukaryotic translation initiation factor 3 subunit G RebB PF11747.8 ORF18074 - 0.0075 16.4 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 Killing trait TrbC PF04956.13 ORF17887 - 0.038 14.2 0.6 0.051 13.8 0.6 1.2 1 0 0 1 1 1 0 TrbC/VIRB2 family NPH3 PF03000.14 ORF16869 - 0.037 13.7 0.0 0.04 13.5 0.0 1.1 1 0 0 1 1 1 0 NPH3 family YppF PF14178.6 ORF16869 - 0.32 10.9 1.8 11 6.0 0.1 2.4 1 1 1 2 2 2 0 YppF-like protein COX2 PF00116.20 ORF15203 - 8.2e-40 135.4 0.0 9.7e-40 135.2 0.0 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain Rieske_2 PF13806.6 ORF14307 - 4e-40 136.0 0.0 4.4e-40 135.8 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain ThiP_synth PF10120.9 ORF13464 - 0.12 12.0 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Thiamine-phosphate synthase DUF3963 PF13124.6 ORF13230 - 2.1 8.4 4.7 3.1 7.9 4.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3963) MCPVI PF02993.14 ORF12552 - 3.3 7.5 7.5 4 7.2 7.5 1.2 1 0 0 1 1 1 0 Minor capsid protein VI Sporozoite_P67 PF05642.11 ORF11877 - 0.073 11.2 3.5 0.067 11.3 3.5 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen GCIP PF13324.6 ORF11877 - 0.23 11.0 4.2 0.24 11.0 4.2 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting CobT PF06213.12 ORF11877 - 0.64 9.4 10.1 0.75 9.1 10.1 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Sigma70_ner PF04546.13 ORF11877 - 0.89 9.4 8.6 1.1 9.1 8.6 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region CDC45 PF02724.14 ORF11877 - 0.98 7.6 11.4 1.1 7.4 11.4 1.0 1 0 0 1 1 1 0 CDC45-like protein YL1 PF05764.13 ORF11877 - 1.1 9.3 14.5 1.3 9.0 14.5 1.0 1 0 0 1 1 1 0 YL1 nuclear protein GP67 PF17634.2 ORF11877 - 1.6 9.2 18.9 2.1 8.8 18.9 1.2 1 0 0 1 1 1 0 Gene product 67 NOA36 PF06524.12 ORF11877 - 2.3 7.5 13.5 2.7 7.2 13.5 1.1 1 0 0 1 1 1 0 NOA36 protein RXT2_N PF08595.11 ORF11877 - 2.6 8.1 7.1 4 7.4 7.1 1.3 1 0 0 1 1 1 0 RXT2-like, N-terminal CENP-B_dimeris PF09026.10 ORF11877 - 2.9 8.3 16.0 4.2 7.8 16.0 1.3 1 0 0 1 1 1 0 Centromere protein B dimerisation domain FAM176 PF14851.6 ORF11877 - 3.5 7.3 8.7 4.3 7.0 8.7 1.1 1 0 0 1 1 1 0 FAM176 family Trypan_PARP PF05887.11 ORF11877 - 8.6 6.3 10.6 10 6.1 10.6 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Astro_capsid_p PF12226.8 ORF11877 - 9.2 5.3 8.3 9.5 5.3 8.3 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Trp_repressor PF01371.19 ORF112534 - 1.9e-28 98.4 0.0 2.3e-28 98.2 0.0 1.1 1 0 0 1 1 1 1 Trp repressor protein HTH_5 PF01022.20 ORF112534 - 0.083 12.8 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Dpy19 PF10034.9 ORF112494 - 6.9e-15 54.3 1.9 7.8e-15 54.1 1.9 1.1 1 0 0 1 1 1 1 Q-cell neuroblast polarisation DUF4441 PF14536.6 ORF112142 - 0.12 12.6 8.6 0.21 11.8 8.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) p450 PF00067.22 ORF11162 - 4.8e-25 88.2 0.7 5.4e-25 88.1 0.7 1.0 1 0 0 1 1 1 1 Cytochrome P450 V-ATPase_G PF03179.15 ORF110768 - 0.053 14.0 13.4 0.066 13.8 13.4 1.3 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit GTA_holin_3TM PF11351.8 ORF110768 - 0.47 11.0 5.1 0.56 10.8 5.1 1.3 1 0 0 1 1 1 0 Holin of 3TMs, for gene-transfer release V_ATPase_I PF01496.19 ORF110768 - 0.93 7.3 8.1 1 7.2 8.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PGA2 PF07543.12 ORF110768 - 1.3 9.0 14.3 1.7 8.6 14.3 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 MMU163 PF17119.5 ORF110768 - 1.3 8.1 10.4 1.9 7.5 10.4 1.3 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis DAG_kinase_N PF14513.6 ORF110768 - 1.4 9.1 10.9 1.6 8.9 10.9 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus DUF2151 PF10221.9 ORF110768 - 2.1 6.8 15.5 2.2 6.8 15.5 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator DUF913 PF06025.12 ORF110768 - 2.7 6.9 12.8 2.9 6.8 12.8 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Peroxin-3 PF04882.12 ORF110768 - 3.2 6.6 17.9 3.5 6.5 17.9 1.0 1 0 0 1 1 1 0 Peroxin-3 Menin PF05053.13 ORF110768 - 3.6 5.8 11.9 3.8 5.8 11.9 1.1 1 0 0 1 1 1 0 Menin Miga PF10265.9 ORF110768 - 5.5 5.8 13.1 5.7 5.8 13.1 1.0 1 0 0 1 1 1 0 Mitoguardin NARP1 PF12569.8 ORF110768 - 5.7 5.7 15.4 6 5.7 15.4 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 MAJIN PF15077.6 ORF110768 - 5.8 6.6 12.7 6.5 6.5 12.7 1.0 1 0 0 1 1 1 0 Membrane-anchored junction protein DUF4407 PF14362.6 ORF110768 - 6.3 6.1 11.5 6.6 6.0 11.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DHHW PF14286.6 ORF110768 - 8 5.7 10.8 9 5.5 10.8 1.1 1 0 0 1 1 1 0 DHHW protein FAT PF02259.23 ORF110671 - 0.17 11.1 0.0 0.23 10.7 0.0 1.1 1 0 0 1 1 1 0 FAT domain DUF1145 PF06611.12 ORF110014 - 0.26 11.3 2.4 3 7.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1145) DUF1192 PF06698.11 ORF10968 - 0.12 12.5 1.4 0.19 11.8 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) ThiP_synth PF10120.9 ORF108897 - 0.12 12.0 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Thiamine-phosphate synthase MFS_1 PF07690.16 ORF107603 - 3e-05 23.1 10.7 6.4e-05 22.0 9.1 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF107603 - 0.00062 18.4 4.0 0.00076 18.1 4.0 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein DUF1624 PF07786.12 ORF107603 - 0.018 14.6 4.0 0.089 12.3 4.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1624) VIT1 PF01988.19 ORF107603 - 0.17 11.7 6.8 0.21 11.4 6.8 1.1 1 0 0 1 1 1 0 VIT family DUF4231 PF14015.6 ORF107603 - 0.3 11.6 2.7 0.6 10.6 2.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) Nucleos_tra2_C PF07662.13 ORF106961 - 1.3e-37 129.7 2.3 1.4e-37 129.6 2.3 1.0 1 0 0 1 1 1 1 Na+ dependent nucleoside transporter C-terminus Memo PF01875.17 ORF10678 - 4.4e-27 94.9 0.0 4.9e-27 94.8 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein Pam16 PF03656.13 ORF106159 - 4e-07 30.1 0.0 4.2e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Pam16 DnaJ PF00226.31 ORF106159 - 3.1e-05 24.0 0.1 5.2e-05 23.3 0.1 1.4 1 1 0 1 1 1 1 DnaJ domain DUF2502 PF10697.9 ORF105621 - 5.3e-22 78.0 31.7 9.1e-22 77.2 31.7 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2502) STIL_N PF15253.6 ORF10508 - 0.091 11.7 0.4 0.13 11.2 0.4 1.2 1 0 0 1 1 1 0 SCL-interrupting locus protein N-terminus HECT PF00632.25 ORF104909 - 4.8e-30 105.1 0.1 5.2e-30 105.0 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) UCR_Fe-S_N PF10399.9 ORF104909 - 0.2 11.1 0.0 0.31 10.4 0.0 1.3 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DUF2530 PF10745.9 ORF104653 - 0.18 12.1 1.1 0.31 11.3 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) Ribosomal_L35Ae PF01247.18 ORF104643 - 5.4e-31 106.6 0.1 6.2e-31 106.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 ORF104643 - 0.0012 19.0 0.1 0.98 9.7 0.0 2.1 2 0 0 2 2 2 2 RimM N-terminal domain DUF2080 PF09853.9 ORF104643 - 0.0077 16.0 0.6 0.37 10.6 0.1 2.4 1 1 1 2 2 2 2 Putative transposon-encoded protein (DUF2080) ubiquitin PF00240.23 ORF102944 - 3.6e-12 45.9 0.0 1e-11 44.4 0.0 1.7 2 0 0 2 2 2 1 Ubiquitin family Ubiquitin_4 PF18036.1 ORF102944 - 0.014 15.5 0.0 0.73 9.9 0.0 2.1 1 1 1 2 2 2 0 Ubiquitin-like domain Rad60-SLD PF11976.8 ORF102944 - 0.13 12.1 0.0 0.8 9.6 0.0 2.1 2 1 0 3 3 3 0 Ubiquitin-2 like Rad60 SUMO-like Pet100 PF09803.9 ORF101665 - 0.0066 17.0 0.5 0.013 16.0 0.1 1.7 1 1 1 2 2 2 1 Pet100 Pox_A21 PF05323.12 ORF101665 - 0.078 13.6 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A21 Protein OAD_gamma PF04277.13 ORF101665 - 0.11 13.1 1.2 0.42 11.2 0.9 1.8 1 1 1 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Strumpellin PF10266.9 ORF100874 - 2.5e-15 55.4 0.0 2.8e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin 7tm_7 PF08395.12 ORF100434 - 9.4 5.3 5.8 12 5.0 5.8 1.2 1 0 0 1 1 1 0 7tm Chemosensory receptor MFS_1 PF07690.16 NODE_54664_length_319_cov_1.257042_g46733_i0reverse_frame_1 - 4.1e-07 29.3 0.1 4.7e-07 29.1 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_54664_length_319_cov_1.257042_g46733_i0reverse_frame_1 - 0.0024 16.8 0.9 0.0027 16.6 0.9 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter DUF4943 PF16301.5 NODE_54664_length_319_cov_1.257042_g46733_i0reverse_frame_1 - 0.088 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4943) CBM9_1 PF06452.11 NODE_54652_length_319_cov_1.760563_g46721_i0reverse_frame_1 - 0.012 15.5 0.2 0.012 15.5 0.2 1.1 1 0 0 1 1 1 0 Carbohydrate family 9 binding domain-like P66_CC PF16563.5 NODE_54650_length_319_cov_1.774648_g46719_i0forward_frame_1 - 0.062 12.9 2.5 0.12 12.0 2.5 1.5 1 0 0 1 1 1 0 Coiled-coil and interaction region of P66A and P66B with MBD2 Latarcin PF10279.9 NODE_54650_length_319_cov_1.774648_g46719_i0forward_frame_1 - 0.089 13.2 0.1 0.13 12.7 0.1 1.2 1 0 0 1 1 1 0 Latarcin precursor PhzC-PhzF PF02567.16 NODE_54646_length_319_cov_1.933099_g46715_i0reverse_frame_1 - 1.1e-25 90.7 0.0 1.1e-25 90.6 0.0 1.0 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein RCR PF12273.8 NODE_54634_length_319_cov_2.454225_g46703_i0forward_frame_1 - 0.64 10.7 1.3 0.99 10.1 1.3 1.2 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red HTH_AraC PF00165.23 NODE_54624_length_319_cov_2.845070_g46693_i0reverse_frame_1 - 5.5e-05 23.2 1.4 7.9e-05 22.7 1.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 NODE_54624_length_319_cov_2.845070_g46693_i0reverse_frame_1 - 0.003 17.8 0.2 0.0042 17.3 0.2 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Peptidase_C2 PF00648.21 NODE_54622_length_319_cov_2.957746_g46691_i0reverse_frame_1 - 2.6e-20 72.7 0.1 3.3e-20 72.3 0.1 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease YyzF PF14116.6 NODE_54611_length_319_cov_4.697183_g46680_i0forward_frame_1 - 0.084 12.9 0.2 0.12 12.4 0.2 1.2 1 0 0 1 1 1 0 YyzF-like protein VirE PF05272.11 NODE_54600_length_319_cov_56.781690_g46669_i0forward_frame_1 - 0.12 12.1 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 Virulence-associated protein E Toxin_34 PF08396.10 NODE_54594_length_319_cov_63.640845_g46663_i0reverse_frame_1 - 0.028 15.2 1.1 0.03 15.1 0.4 1.4 2 0 0 2 2 2 0 Spider toxin omega agatoxin/Tx1 family Gal_mutarotas_2 PF13802.6 NODE_54589_length_319_cov_70.116197_g46658_i0reverse_frame_1 - 0.08 13.3 0.0 0.14 12.5 0.0 1.4 1 0 0 1 1 1 0 Galactose mutarotase-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks219.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks219.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks219.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks219.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aldo_ket_red PF00248.21 ORF50746 - 5.4e-25 88.2 0.0 9e-25 87.5 0.0 1.3 1 0 0 1 1 1 1 Aldo/keto reductase family Adenylsucc_synt PF00709.21 ORF44009 - 5.1e-167 556.0 0.0 5.8e-167 555.9 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Nse4-Nse3_bdg PF15412.6 ORF44009 - 0.035 14.2 0.0 0.1 12.7 0.0 1.7 1 0 0 1 1 1 0 Binding domain of Nse4/EID3 to Nse3-MAGE Biotin_carb_C PF02785.19 ORF32343 - 0.13 12.4 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 Biotin carboxylase C-terminal domain bZIP_2 PF07716.15 ORF32343 - 1.4 9.1 11.2 11 6.2 4.7 3.0 3 0 0 3 3 3 0 Basic region leucine zipper DUF5082 PF16888.5 ORF32343 - 1.5 9.2 6.4 11 6.3 0.4 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF5082) HALZ PF02183.18 ORF32343 - 2.2 8.6 5.9 0.49 10.6 1.8 2.0 2 0 0 2 2 2 0 Homeobox associated leucine zipper Ion_trans PF00520.31 ORF13224 - 9.9e-20 70.8 23.9 1.3e-19 70.4 23.9 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF13224 - 7.5e-05 23.1 0.9 0.02 15.3 0.1 2.3 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF13224 - 0.00018 20.8 1.5 0.0011 18.4 0.1 3.0 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF13224 - 0.003 17.4 0.3 0.029 14.3 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain PKD_channel PF08016.12 ORF13224 - 0.0043 15.8 18.7 0.009 14.7 10.0 2.5 2 0 0 2 2 2 2 Polycystin cation channel EF-hand_5 PF13202.6 ORF13224 - 0.07 12.7 0.1 0.23 11.0 0.1 1.9 1 0 0 1 1 1 0 EF hand Glyco_trans_2_3 PF13632.6 ORF110568 - 1e-14 54.9 1.1 1e-14 54.9 1.1 1.9 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Cellulose_synt PF03552.14 ORF110568 - 1e-13 50.7 2.8 2.5e-13 49.5 2.5 1.6 1 1 1 2 2 2 1 Cellulose synthase PilZ PF07238.14 ORF110568 - 7.9e-13 48.6 0.1 1.5e-12 47.7 0.1 1.5 1 0 0 1 1 1 1 PilZ domain Glyco_tranf_2_3 PF13641.6 ORF110568 - 7.1e-08 32.6 0.1 1.1e-07 31.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 ORF110568 - 9.6e-07 28.4 0.1 1.8e-06 27.6 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Insulin_TMD PF17870.1 ORF110568 - 0.55 10.3 2.4 4 7.6 0.2 2.6 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Alpha-amylase PF00128.24 ORF106269 - 4.1e-54 184.4 2.5 9e-54 183.3 2.5 1.5 1 1 0 1 1 1 1 Alpha amylase, catalytic domain GHL10 PF02638.15 ORF106269 - 0.0014 17.8 0.1 0.0042 16.2 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolase-like 10 DUF1971 PF09313.11 ORF106269 - 0.074 13.1 0.0 0.23 11.5 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1971) DUF1966 PF09260.11 ORF106269 - 0.16 12.2 0.2 0.4 11.0 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1966) RFC1 PF08519.12 ORF105366 - 4.9e-38 130.8 0.0 4.9e-38 130.8 0.0 2.0 3 0 0 3 3 3 1 Replication factor RFC1 C terminal domain AAA_assoc_2 PF16193.5 ORF105366 - 9.8e-05 22.6 0.2 0.00029 21.1 0.2 1.8 1 0 0 1 1 1 1 AAA C-terminal domain DNA_pol3_delta PF06144.13 ORF105366 - 0.00016 21.5 0.0 0.00079 19.3 0.0 2.0 2 0 0 2 2 2 1 DNA polymerase III, delta subunit DUF2052 PF09747.9 ORF105366 - 0.11 12.7 4.2 0.21 11.7 4.2 1.5 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) SWI-SNF_Ssr4 PF08549.10 ORF105366 - 0.12 11.0 7.2 0.17 10.5 7.2 1.2 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) NCOA_u2 PF16665.5 ORF105366 - 0.29 11.4 0.1 0.29 11.4 0.1 2.1 2 0 0 2 2 2 0 Unstructured region on nuclear receptor coactivator protein RR_TM4-6 PF06459.12 ORF105366 - 6.6 6.5 12.2 11 5.8 12.2 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 HNOBA PF07701.14 ORF105366 - 9.8 5.5 9.0 0.34 10.3 2.4 1.9 2 1 0 2 2 2 0 Heme NO binding associated Ion_trans PF00520.31 ORF10507 - 2.3e-30 105.6 18.3 3.7e-30 104.9 18.3 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF10507 - 2.3e-10 39.2 1.0 0.00022 20.6 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF10507 - 7.7e-10 37.9 0.3 0.00052 19.7 0.0 3.5 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF10507 - 3.1e-09 37.1 4.4 1.4e-06 28.6 0.8 2.5 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF10507 - 3.3e-08 33.2 0.7 0.0026 17.6 0.2 3.0 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF10507 - 1.1e-07 31.0 1.1 0.0011 18.3 0.1 2.6 2 0 0 2 2 2 2 EF hand SesA PF17107.5 ORF10507 - 0.11 12.7 0.2 0.55 10.4 0.0 2.0 2 0 0 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases TssO PF17561.2 ORF10507 - 0.14 12.3 0.2 0.14 12.3 0.2 2.1 2 0 0 2 2 2 0 Type VI secretion system, TssO UCH PF00443.29 ORF10507 - 0.23 10.9 0.0 0.32 10.5 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase TarH PF02203.15 ORF10507 - 0.32 10.9 3.3 0.52 10.2 0.1 2.4 2 0 0 2 2 2 0 Tar ligand binding domain homologue DUF92 PF01940.16 ORF10507 - 9.7 5.5 8.4 9.4 5.6 5.7 2.3 2 1 0 2 2 2 0 Integral membrane protein DUF92 Toluene_X PF03349.16 ORF102955 - 9.3e-156 518.7 16.7 1.1e-155 518.5 16.7 1.0 1 0 0 1 1 1 1 Outer membrane protein transport protein (OMPP1/FadL/TodX) DUF2490 PF10677.9 ORF102955 - 0.0053 16.7 7.2 0.53 10.2 0.2 4.1 2 1 1 3 3 3 3 Protein of unknown function (DUF2490) YadA_anchor PF03895.15 ORF102955 - 0.016 15.3 14.8 0.11 12.6 0.0 5.5 4 3 2 6 6 6 0 YadA-like membrane anchor domain Tubulin PF00091.25 ORF101633 - 9.2e-41 140.2 0.0 5.9e-38 131.0 0.0 2.4 2 0 0 2 2 2 2 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF101633 - 1.3e-17 64.1 0.0 2.7e-17 63.1 0.0 1.5 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_2 PF13809.6 ORF101633 - 0.034 13.3 0.0 1.7 7.7 0.0 2.2 2 0 0 2 2 2 0 Tubulin like DUF3492 PF11997.8 ORF101633 - 0.18 11.5 0.7 0.6 9.8 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF3492) IPT PF01745.16 ORF101633 - 0.21 11.0 0.3 27 4.1 0.0 2.7 2 1 1 3 3 3 0 Isopentenyl transferase HSF_DNA-bind PF00447.17 ORF93581 - 8.5e-28 96.8 2.8 8.5e-28 96.8 2.8 3.2 3 1 0 3 3 3 1 HSF-type DNA-binding ISG65-75 PF11727.8 ORF93581 - 0.2 10.8 3.1 0.36 10.0 3.1 1.3 1 0 0 1 1 1 0 Invariant surface glycoprotein TetR PF13972.6 ORF93581 - 0.25 11.1 3.5 2.3 7.9 0.8 2.3 2 0 0 2 2 2 0 Bacterial transcriptional repressor Hom_end_hint PF05203.16 ORF93581 - 1.9 8.3 10.6 20 5.1 10.5 2.2 1 1 0 1 1 1 0 Hom_end-associated Hint CDC37_N PF03234.14 ORF93581 - 3.6 8.5 11.6 6.4 7.7 4.5 2.6 1 1 1 2 2 2 0 Cdc37 N terminal kinase binding KH_1 PF00013.29 ORF90791 - 2e-22 78.8 4.8 9.6e-12 44.6 0.5 2.5 2 0 0 2 2 2 2 KH domain zf-CCHC PF00098.23 ORF90791 - 8e-08 32.0 6.8 0.00021 21.2 0.6 2.7 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 ORF90791 - 3.6e-05 23.6 4.9 0.021 14.8 0.5 2.3 1 1 1 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF90791 - 0.0087 15.8 4.4 0.87 9.4 0.4 2.3 2 0 0 2 2 2 2 Zinc knuckle KH_2 PF07650.17 ORF90791 - 0.098 12.5 0.7 13 5.7 0.1 2.5 2 0 0 2 2 2 0 KH domain zf-CCHC_5 PF14787.6 ORF90791 - 3.2 7.6 5.6 1 9.2 0.3 2.5 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger zf-CCHC_6 PF15288.6 ORF90791 - 5.3 7.0 7.3 0.68 9.8 0.6 2.4 2 0 0 2 2 2 0 Zinc knuckle Pyr_redox_2 PF07992.14 ORF84395 - 1.6e-16 60.4 0.0 2.6e-16 59.7 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF84395 - 7.6e-09 36.0 0.0 2.5e-07 31.2 0.0 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DUF1188 PF06690.11 ORF84395 - 0.00016 21.3 0.0 0.029 13.9 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1188) DAO PF01266.24 ORF84395 - 0.018 14.7 0.0 6 6.4 0.0 2.9 2 1 0 3 3 3 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF84395 - 0.04 14.2 0.0 3 8.1 0.0 3.0 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF84395 - 0.2 10.9 0.0 2.7 7.2 0.0 2.2 2 0 0 2 2 2 0 Thi4 family MIP-T3 PF10243.9 ORF61102 - 2.5e-42 143.4 0.1 2.5e-42 143.4 0.1 2.3 2 0 0 2 2 2 1 Microtubule-binding protein MIP-T3 CH-like domain MIP-T3_C PF17749.1 ORF61102 - 2.2e-36 125.1 7.0 2.2e-36 125.1 7.0 3.7 4 1 0 4 4 4 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF61102 - 0.019 15.2 5.9 0.019 15.2 5.9 2.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family HrcA_DNA-bdg PF03444.15 ORF61102 - 0.1 12.3 1.0 1.2 8.9 0.3 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AAA_13 PF13166.6 ORF61102 - 2.4 6.7 25.6 0.27 9.8 2.4 2.1 2 0 0 2 2 2 0 AAA domain SBBP PF06739.11 ORF55690 - 0.0018 18.2 10.2 0.019 14.9 0.1 4.6 5 0 0 5 5 5 2 Beta-propeller repeat DUF3672 PF12421.8 ORF55690 - 0.02 14.8 0.3 0.92 9.4 0.1 2.3 2 0 0 2 2 2 0 Fibronectin type III protein Alpha_GJ PF03229.13 ORF55690 - 2.2 8.8 6.4 4.6 7.8 6.4 1.5 1 0 0 1 1 1 0 Alphavirus glycoprotein J Ald_Xan_dh_C2 PF02738.18 ORF53555 - 7.4e-104 348.2 0.1 8.5e-104 348.0 0.1 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase 4PPT_N PF17837.1 ORF53555 - 0.1 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 4'-phosphopantetheinyl transferase N-terminal domain UDPGT PF00201.18 ORF43694 - 3.3e-17 62.5 0.0 9e-17 61.0 0.0 1.7 2 1 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF43694 - 2e-05 24.7 0.0 3.7e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Amidase_3 PF01520.18 ORF41492 - 1.4e-50 171.8 0.3 2.1e-50 171.2 0.3 1.3 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase AMIN PF11741.8 ORF41492 - 6.1e-26 90.4 0.1 1.1e-25 89.5 0.1 1.5 1 0 0 1 1 1 1 AMIN domain DUF1664 PF07889.12 ORF35108 - 0.0097 15.9 1.2 0.0097 15.9 1.2 5.0 3 2 0 4 4 4 1 Protein of unknown function (DUF1664) DUF508 PF04370.12 ORF35108 - 0.016 15.0 0.1 0.034 13.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF508) UpxZ PF06603.11 ORF35108 - 0.044 14.1 0.1 0.15 12.3 0.1 1.9 1 0 0 1 1 1 0 UpxZ family of transcription anti-terminator antagonists Tropomyosin_1 PF12718.7 ORF35108 - 0.076 13.2 24.7 1.6 8.9 2.0 4.2 2 1 1 4 4 4 0 Tropomyosin like IMS PF00817.20 ORF35108 - 0.71 9.9 3.7 0.55 10.2 0.2 2.2 1 1 1 2 2 2 0 impB/mucB/samB family DUF4795 PF16043.5 ORF35108 - 0.84 9.2 26.9 1.8 8.1 1.2 3.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4795) PIG-P PF08510.12 ORF35108 - 0.95 9.4 3.0 6.8 6.6 0.1 2.7 3 0 0 3 3 3 0 PIG-P BLOC1_2 PF10046.9 ORF35108 - 2.7 8.3 20.8 3.4 8.0 1.8 4.6 4 2 0 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Tnp_22_trimer PF17489.2 ORF35108 - 2.9 7.9 12.7 10 6.2 0.2 5.0 6 0 0 6 6 6 0 L1 transposable element trimerization domain BRI3BP PF14965.6 ORF35108 - 3.2 7.3 6.0 3.3 7.2 0.1 3.0 4 0 0 4 4 4 0 Negative regulator of p53/TP53 TMPIT PF07851.13 ORF35108 - 5.8 6.1 23.1 2.3 7.4 4.2 3.5 2 1 0 3 3 3 0 TMPIT-like protein Fib_alpha PF08702.10 ORF35108 - 8.8 6.5 30.4 1.6 9.0 1.0 3.9 3 1 0 3 3 3 0 Fibrinogen alpha/beta chain family Syntaxin-6_N PF09177.11 ORF35108 - 9.9 6.8 18.7 1.3e+02 3.2 8.1 4.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal LBP_BPI_CETP PF01273.25 ORF3472 - 0.17 11.5 1.5 0.72 9.4 0.2 2.6 2 2 1 3 3 3 0 LBP / BPI / CETP family, N-terminal domain EF-hand_1 PF00036.32 ORF34329 - 4e-12 44.8 0.0 7.2e-05 22.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF34329 - 1.5e-11 44.6 0.2 4.3e-08 33.5 0.0 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF34329 - 2.9e-11 42.3 0.0 5.9e-05 22.7 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF34329 - 4.7e-11 41.7 0.2 6.7e-05 22.2 0.3 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF34329 - 5.2e-06 26.2 0.0 0.01 15.7 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain pair DUF2510 PF10708.9 ORF34329 - 0.025 14.3 0.2 0.062 13.1 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2510) EF-hand_4 PF12763.7 ORF34329 - 0.07 13.1 0.1 6.4 6.8 0.1 2.4 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand FG-GAP PF01839.23 ORF34329 - 0.3 11.3 1.6 4.1 7.6 0.3 2.4 2 0 0 2 2 2 0 FG-GAP repeat Arginosuc_synth PF00764.19 ORF17679 - 8.6e-57 193.2 0.0 1.1e-56 192.9 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 ORF17679 - 0.023 14.2 0.0 0.044 13.3 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC KH_1 PF00013.29 ORF17283 - 2e-22 78.8 4.8 9.6e-12 44.6 0.5 2.5 2 0 0 2 2 2 2 KH domain zf-CCHC PF00098.23 ORF17283 - 8e-08 32.0 6.8 0.00021 21.2 0.6 2.7 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 ORF17283 - 3.6e-05 23.6 4.9 0.021 14.8 0.5 2.3 1 1 1 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF17283 - 0.0087 15.8 4.4 0.87 9.4 0.4 2.3 2 0 0 2 2 2 2 Zinc knuckle KH_2 PF07650.17 ORF17283 - 0.098 12.5 0.7 13 5.7 0.1 2.5 2 0 0 2 2 2 0 KH domain zf-CCHC_5 PF14787.6 ORF17283 - 3.2 7.6 5.6 1 9.2 0.3 2.5 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger zf-CCHC_6 PF15288.6 ORF17283 - 5.3 7.0 7.3 0.68 9.8 0.6 2.4 2 0 0 2 2 2 0 Zinc knuckle MIP-T3 PF10243.9 ORF13058 - 2.5e-42 143.4 0.1 2.5e-42 143.4 0.1 2.3 2 0 0 2 2 2 1 Microtubule-binding protein MIP-T3 CH-like domain MIP-T3_C PF17749.1 ORF13058 - 2.2e-36 125.1 7.0 2.2e-36 125.1 7.0 3.7 4 1 0 4 4 4 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF13058 - 0.019 15.2 5.9 0.019 15.2 5.9 2.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family HrcA_DNA-bdg PF03444.15 ORF13058 - 0.1 12.3 1.0 1.2 8.9 0.3 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AAA_13 PF13166.6 ORF13058 - 2.4 6.7 25.6 0.27 9.8 2.4 2.1 2 0 0 2 2 2 0 AAA domain Sortilin-Vps10 PF15902.5 ORF110129 - 1.4e-69 235.0 1.7 1.6e-48 165.6 0.0 2.1 2 0 0 2 2 2 2 Sortilin, neurotensin receptor 3, Sortilin_C PF15901.5 ORF110129 - 1.9e-20 73.9 0.3 2.8e-20 73.3 0.3 1.2 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal BNR PF02012.20 ORF110129 - 1.4 9.2 10.6 1.6 9.0 0.1 4.3 4 0 0 4 4 4 0 BNR/Asp-box repeat Ax_dynein_light PF10211.9 ORF108509 - 1e-08 35.4 7.1 1e-08 35.4 7.1 2.4 2 0 0 2 2 2 1 Axonemal dynein light chain Phage_GP20 PF06810.11 ORF108509 - 0.00055 19.8 20.7 0.0025 17.6 6.7 3.0 3 0 0 3 3 3 2 Phage minor structural protein GP20 Prominin PF05478.11 ORF108509 - 0.0015 16.6 4.0 0.0015 16.6 4.0 2.1 2 0 0 2 2 2 1 Prominin Fib_alpha PF08702.10 ORF108509 - 0.0038 17.4 21.4 0.043 14.0 6.8 3.3 2 1 1 3 3 3 2 Fibrinogen alpha/beta chain family GCP_C_terminal PF04130.13 ORF108509 - 0.014 14.9 3.4 0.024 14.1 3.4 1.4 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal Spc7 PF08317.11 ORF108509 - 0.018 13.9 21.2 0.084 11.7 9.5 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF108509 - 0.065 13.3 16.6 0.29 11.2 3.2 3.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF948 PF06103.11 ORF108509 - 0.072 13.4 7.0 5.4 7.3 0.1 3.7 4 0 0 4 4 3 0 Bacterial protein of unknown function (DUF948) ARL2_Bind_BART PF11527.8 ORF108509 - 0.075 13.1 3.2 0.19 11.8 1.1 2.6 1 1 1 2 2 2 0 The ARF-like 2 binding protein BART Tub PF01167.18 ORF108509 - 0.12 12.1 1.6 0.21 11.3 1.6 1.3 1 0 0 1 1 1 0 Tub family DUF5056 PF16479.5 ORF108509 - 0.14 12.4 0.0 0.4 10.9 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF5056) ArsR PF09824.9 ORF108509 - 0.18 11.4 3.2 0.37 10.4 0.0 2.7 2 1 1 3 3 3 0 ArsR transcriptional regulator Muted PF14942.6 ORF108509 - 0.56 10.5 20.3 0.11 12.9 8.8 3.0 3 0 0 3 3 3 0 Organelle biogenesis, Muted-like protein Snapin_Pallidin PF14712.6 ORF108509 - 0.84 10.1 24.0 7.4 7.1 4.9 3.8 2 1 1 3 3 3 0 Snapin/Pallidin CENP-H PF05837.12 ORF108509 - 1.9 9.0 23.7 1.3 9.5 11.1 3.5 3 0 0 3 3 3 0 Centromere protein H (CENP-H) DUF4094 PF13334.6 ORF108509 - 4.1 7.9 6.5 7.2 7.1 0.5 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) Baculo_PEP_C PF04513.12 ORF108509 - 4.4 7.4 7.0 16 5.5 0.5 3.2 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus EMC3_TMCO1 PF01956.16 ORF108509 - 6.3 6.5 10.7 0.78 9.4 3.8 2.2 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like TMPIT PF07851.13 ORF108509 - 8.8 5.5 17.4 8.7 5.5 7.3 2.7 2 1 1 3 3 3 0 TMPIT-like protein TPP_enzyme_C PF02775.21 ORF108227 - 2.4e-48 163.8 0.1 4.9e-48 162.8 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF108227 - 1.5e-46 157.5 1.1 2.4e-46 156.9 0.3 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_N PF02776.18 ORF108227 - 5.1e-14 52.3 0.2 1.9e-13 50.4 0.0 2.1 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CO_dh PF02552.16 ORF108227 - 0.0096 15.7 0.1 0.018 14.8 0.1 1.5 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit XFP_N PF09364.10 ORF108227 - 0.083 11.7 0.0 0.13 11.0 0.0 1.2 1 0 0 1 1 1 0 XFP N-terminal domain KH_1 PF00013.29 ORF107822 - 2e-22 78.8 4.8 9.6e-12 44.6 0.5 2.5 2 0 0 2 2 2 2 KH domain zf-CCHC PF00098.23 ORF107822 - 8e-08 32.0 6.8 0.00021 21.2 0.6 2.7 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 ORF107822 - 3.6e-05 23.6 4.9 0.021 14.8 0.5 2.3 1 1 1 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF107822 - 0.0087 15.8 4.4 0.87 9.4 0.4 2.3 2 0 0 2 2 2 2 Zinc knuckle KH_2 PF07650.17 ORF107822 - 0.098 12.5 0.7 13 5.7 0.1 2.5 2 0 0 2 2 2 0 KH domain zf-CCHC_5 PF14787.6 ORF107822 - 3.2 7.6 5.6 1 9.2 0.3 2.5 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger zf-CCHC_6 PF15288.6 ORF107822 - 5.3 7.0 7.3 0.68 9.8 0.6 2.4 2 0 0 2 2 2 0 Zinc knuckle KAP PF05804.12 ORF103885 - 6.2e-95 318.9 15.1 7.6e-95 318.6 15.1 1.1 1 0 0 1 1 1 1 Kinesin-associated protein (KAP) HEAT_2 PF13646.6 ORF103885 - 0.006 16.9 0.1 3.5 8.1 0.0 4.0 5 0 0 5 5 5 1 HEAT repeats DUF2258 PF10015.9 ORF103885 - 0.024 14.8 2.1 1.4 9.1 0.3 2.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) HEAT PF02985.22 ORF103885 - 0.04 14.2 0.0 0.2 12.0 0.0 2.3 1 0 0 1 1 1 0 HEAT repeat RICTOR_M PF14666.6 ORF103885 - 0.075 12.8 3.4 0.49 10.2 0.1 3.0 2 1 1 3 3 3 0 Rapamycin-insensitive companion of mTOR, middle domain Med26 PF08711.11 ORF103885 - 0.075 13.1 0.1 0.23 11.5 0.1 1.9 1 0 0 1 1 1 0 TFIIS helical bundle-like domain Spc7 PF08317.11 ORF9861 - 0.046 12.6 6.7 0.084 11.7 6.7 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Uso1_p115_C PF04871.13 ORF9861 - 0.05 14.0 3.9 0.26 11.7 3.9 2.2 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF4558 PF15104.6 ORF9861 - 0.079 13.0 1.3 0.28 11.3 1.3 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4558) DUF4763 PF15960.5 ORF9861 - 0.092 12.0 8.1 0.06 12.6 2.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4763) NPV_P10 PF05531.12 ORF9861 - 0.093 13.2 1.8 0.36 11.3 0.6 2.6 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Nup88 PF10168.9 ORF9861 - 0.28 9.0 4.8 0.39 8.5 4.8 1.2 1 0 0 1 1 1 0 Nuclear pore component THOC7 PF05615.13 ORF9861 - 0.53 10.6 5.2 0.52 10.6 1.3 2.3 2 1 0 2 2 2 0 Tho complex subunit 7 betaPIX_CC PF16523.5 ORF9861 - 0.67 9.8 9.0 0.56 10.1 1.7 2.8 2 1 1 3 3 3 0 betaPIX coiled coil Tup_N PF08581.10 ORF9861 - 1.5 9.2 6.0 14 6.1 1.1 2.5 1 1 1 2 2 2 0 Tup N-terminal DUF1640 PF07798.11 ORF9861 - 1.6 8.7 6.8 6.5 6.8 6.8 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) TolA_bind_tri PF16331.5 ORF9861 - 2.1 8.5 10.2 5.9 7.1 0.1 3.6 3 0 0 3 3 3 0 TolA binding protein trimerisation MFS_1 PF07690.16 ORF96352 - 1.3e-27 96.6 34.6 1.3e-27 96.6 34.6 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily YrvL PF14184.6 ORF96352 - 0.019 15.1 1.3 0.019 15.1 1.3 2.8 2 1 0 2 2 2 0 Regulatory protein YrvL Chloroa_b-bind PF00504.21 ORF90844 - 9.1e-67 224.6 0.2 4.7e-33 115.0 0.0 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein SBP_bac_5 PF00496.22 ORF88909 - 2.6e-20 72.7 0.0 4.2e-19 68.8 0.0 2.0 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle DUF3552 PF12072.8 ORF83150 - 0.0019 17.7 9.8 0.0019 17.7 9.8 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF3552) HemX PF04375.14 ORF83150 - 0.013 14.8 22.6 0.054 12.8 7.0 2.3 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF5082 PF16888.5 ORF83150 - 0.047 14.0 27.0 0.83 9.9 2.2 4.1 3 1 0 3 3 3 0 Domain of unknown function (DUF5082) SspH PF08141.12 ORF83150 - 0.067 13.3 5.3 0.43 10.8 0.1 3.5 3 0 0 3 3 3 0 Small acid-soluble spore protein H family FAM76 PF16046.5 ORF83150 - 0.26 10.6 27.2 2.6 7.3 10.3 2.5 1 1 1 2 2 2 0 FAM76 protein Golgin_A5 PF09787.9 ORF83150 - 0.28 10.6 26.2 0.46 9.9 26.2 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF966 PF06136.13 ORF83150 - 0.3 10.8 12.6 0.36 10.5 12.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Spc7 PF08317.11 ORF83150 - 0.45 9.3 32.5 1.5 7.7 13.0 2.3 1 1 1 2 2 2 0 Spc7 kinetochore protein Atg14 PF10186.9 ORF83150 - 0.64 9.1 33.6 0.02 14.0 18.4 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 TRAF_BIRC3_bd PF16673.5 ORF83150 - 0.85 9.5 13.3 0.54 10.1 2.5 2.9 1 1 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF4200 PF13863.6 ORF83150 - 2 8.8 29.7 7.1 7.1 7.7 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) HrpB7 PF09486.10 ORF83150 - 2.1 8.7 18.5 3.6 7.9 5.1 3.1 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) DUF16 PF01519.16 ORF83150 - 2.1 8.9 29.1 0.28 11.7 10.4 4.0 1 1 2 3 3 3 0 Protein of unknown function DUF16 kleA_kleC PF17383.2 ORF83150 - 2.2 8.7 6.9 1.5 9.2 2.3 2.7 1 1 2 3 3 3 0 Uncharacterized KorC regulated protein A DUF3450 PF11932.8 ORF83150 - 3.6 6.8 23.2 9 5.5 9.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF2968 PF11180.8 ORF83150 - 5.1 6.7 19.9 0.5 10.0 11.2 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF2968) TMF_DNA_bd PF12329.8 ORF83150 - 5.7 7.0 39.9 0.32 11.0 12.1 4.1 1 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding UPF0242 PF06785.11 ORF83150 - 6.7 6.8 35.2 0.52 10.4 4.9 2.9 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus HIP1_clath_bdg PF16515.5 ORF83150 - 7.8 7.2 25.4 0.75 10.4 15.2 2.7 1 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 MCC-bdg_PDZ PF10506.9 ORF83150 - 8.3 6.5 11.2 13 5.9 3.4 2.9 1 1 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome APG6_N PF17675.1 ORF83150 - 9.6 6.7 31.1 2.8 8.5 5.8 2.4 1 1 1 2 2 2 0 Apg6 coiled-coil region TolA_bind_tri PF16331.5 ORF83150 - 9.8 6.3 22.5 7.3 6.7 4.9 3.4 2 1 2 4 4 3 0 TolA binding protein trimerisation TIR_2 PF13676.6 ORF77240 - 0.025 15.2 0.0 0.14 12.8 0.0 2.1 2 0 0 2 2 2 0 TIR domain DUF5389 PF17364.2 ORF77240 - 0.045 13.8 3.4 2.3 8.3 0.4 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5389) HET PF06985.11 ORF77240 - 0.052 13.9 1.1 0.17 12.2 0.2 2.2 1 1 1 2 2 2 0 Heterokaryon incompatibility protein (HET) Chloroa_b-bind PF00504.21 ORF6672 - 9.1e-67 224.6 0.2 4.7e-33 115.0 0.0 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein ATP-synt_ab PF00006.25 ORF60275 - 2.9e-48 164.4 0.0 3.7e-48 164.0 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 ORF60275 - 4e-23 82.1 0.3 6.1e-23 81.5 0.3 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain RCC1_2 PF13540.6 ORF59682 - 1.1e-11 44.2 34.5 0.26 11.2 0.4 9.4 9 0 0 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF59682 - 3.2e-05 24.2 0.6 38 4.7 0.1 6.2 4 2 2 6 6 6 1 TFIIH p62 subunit, N-terminal domain Spectrin PF00435.21 ORF59682 - 0.0003 21.2 0.0 89 3.6 0.0 6.1 7 0 0 7 7 7 0 Spectrin repeat DUF4874 PF16173.5 ORF59682 - 0.012 15.3 0.9 0.1 12.3 0.0 2.6 3 1 0 3 3 3 0 Domain of unknown function (DUF4874) PLDc_2 PF13091.6 ORF5472 - 9.9e-54 180.8 1.3 5.6e-26 91.0 0.2 2.1 2 0 0 2 2 2 2 PLD-like domain HHH_3 PF12836.7 ORF5472 - 3.7e-20 71.9 0.0 5.9e-20 71.3 0.0 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 ORF5472 - 1.3e-12 46.9 0.2 5e-08 32.4 0.0 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif FAM83 PF07894.12 ORF5472 - 8.8e-07 28.7 0.6 0.01 15.4 0.1 3.0 2 1 0 2 2 2 2 FAM83 A-H Regulator_TrmB PF11495.8 ORF5472 - 4.4e-06 26.1 0.1 0.026 13.7 0.0 2.2 2 0 0 2 2 2 2 Archaeal transcriptional regulator TrmB HHH_6 PF14579.6 ORF5472 - 5.9e-06 26.4 0.0 1.7e-05 25.0 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif PLDc PF00614.22 ORF5472 - 2.4e-05 24.3 2.3 0.18 12.0 0.1 2.5 2 0 0 2 2 2 2 Phospholipase D Active site motif HHH_5 PF14520.6 ORF5472 - 7.5e-05 23.3 0.0 0.027 15.1 0.0 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 ORF5472 - 0.00086 19.4 0.0 0.0075 16.4 0.0 2.2 1 1 1 2 2 2 1 Helix-hairpin-helix motif DUF655 PF04919.12 ORF5472 - 0.015 15.2 0.0 0.027 14.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF655) HRDC PF00570.23 ORF5472 - 0.018 15.0 0.0 4 7.5 0.0 2.6 2 0 0 2 2 2 0 HRDC domain T2SSK PF03934.13 ORF5472 - 0.03 13.7 0.0 0.058 12.8 0.0 1.4 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein K PsbU PF06514.11 ORF5472 - 0.1 12.6 0.0 0.28 11.2 0.0 1.7 1 0 0 1 1 1 0 Photosystem II 12 kDa extrinsic protein (PsbU) BCCT PF02028.17 ORF52607 - 3.5e-108 362.2 35.3 3.9e-108 362.0 35.3 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter Aa_trans PF01490.18 ORF30211 - 5.7e-46 157.0 22.1 6.5e-46 156.8 22.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein EF-hand_7 PF13499.6 ORF22965 - 1.6e-07 31.6 6.1 0.00013 22.3 0.5 5.0 3 2 1 4 4 4 2 EF-hand domain pair EF-hand_13 PF17958.1 ORF22965 - 4.2e-07 29.7 0.3 2.8e-06 27.0 0.1 2.5 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF22965 - 0.0033 16.9 0.2 5 6.9 0.0 4.5 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF22965 - 0.006 16.4 4.6 5.5 7.2 0.0 5.3 4 0 0 4 4 4 1 EF-hand domain AAA PF00004.29 ORF18453 - 4.4e-42 143.6 0.0 1.2e-41 142.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF18453 - 1.4e-10 40.8 0.9 2.6e-10 39.9 0.9 1.4 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 ORF18453 - 1.9e-09 37.3 0.0 3.6e-09 36.4 0.0 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_22 PF13401.6 ORF18453 - 2.9e-06 27.6 0.2 0.0041 17.4 0.1 2.5 1 1 1 2 2 2 2 AAA domain AAA_2 PF07724.14 ORF18453 - 4.9e-06 26.8 0.0 1.2e-05 25.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 ORF18453 - 1.3e-05 24.5 0.0 2.4e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_5 PF07728.14 ORF18453 - 0.00014 21.9 0.1 0.00065 19.7 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF18453 - 0.00018 21.9 0.1 0.00088 19.7 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 ORF18453 - 0.0014 18.4 0.0 0.0028 17.4 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain ATPase PF06745.13 ORF18453 - 0.0032 16.9 0.1 0.13 11.6 0.0 2.4 1 1 0 2 2 2 1 KaiC IstB_IS21 PF01695.17 ORF18453 - 0.0095 15.7 0.0 0.018 14.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein TIP49 PF06068.13 ORF18453 - 0.021 14.1 0.2 0.052 12.8 0.1 1.6 1 1 1 2 2 2 0 TIP49 P-loop domain AAA_24 PF13479.6 ORF18453 - 0.023 14.4 0.1 0.078 12.7 0.1 2.0 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF18453 - 0.023 15.1 0.0 0.051 14.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF18453 - 0.024 14.4 0.1 0.12 12.0 0.0 2.1 3 0 0 3 3 2 0 Sigma-54 interaction domain Prot_ATP_OB_N PF17758.1 ORF18453 - 0.026 14.2 0.2 0.074 12.7 0.0 1.9 2 0 0 2 2 1 0 Proteasomal ATPase OB N-terminal domain NACHT PF05729.12 ORF18453 - 0.027 14.4 0.1 0.24 11.3 0.1 2.2 1 1 1 2 2 2 0 NACHT domain AAA_3 PF07726.11 ORF18453 - 0.033 14.0 0.0 0.094 12.6 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF1128 PF06569.11 ORF18453 - 0.05 13.6 0.0 0.96 9.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1128) PhoH PF02562.16 ORF18453 - 0.05 13.0 0.2 0.29 10.6 0.1 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_14 PF13173.6 ORF18453 - 0.05 13.6 0.1 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 ORF18453 - 0.057 13.0 0.5 1.4 8.4 0.1 2.3 1 1 0 2 2 2 0 AAA domain AAA_28 PF13521.6 ORF18453 - 0.075 13.3 1.2 0.16 12.2 0.0 2.2 3 0 0 3 3 2 0 AAA domain AAA_33 PF13671.6 ORF18453 - 0.088 13.0 1.8 0.14 12.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF18453 - 0.088 12.0 0.1 0.84 8.8 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain Mg_chelatase PF01078.21 ORF18453 - 0.096 12.1 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TsaE PF02367.17 ORF18453 - 0.12 12.4 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 ORF18453 - 0.14 11.7 0.0 0.39 10.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF18453 - 0.14 12.6 0.0 0.37 11.3 0.0 2.0 1 1 0 1 1 1 0 ABC transporter AAA_30 PF13604.6 ORF18453 - 0.16 11.6 0.2 0.39 10.4 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF18453 - 0.33 11.5 0.0 0.33 11.5 0.0 2.8 3 0 0 3 3 2 0 AAA domain Chloroa_b-bind PF00504.21 ORF105203 - 9.1e-67 224.6 0.2 4.7e-33 115.0 0.0 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein ATP-synt_ab PF00006.25 ORF103654 - 2.9e-48 164.4 0.0 3.7e-48 164.0 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 ORF103654 - 4e-23 82.1 0.3 6.1e-23 81.5 0.3 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain AAA PF00004.29 ORF103125 - 4.4e-42 143.6 0.0 1.2e-41 142.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF103125 - 1.4e-10 40.8 0.9 2.6e-10 39.9 0.9 1.4 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 ORF103125 - 1.9e-09 37.3 0.0 3.6e-09 36.4 0.0 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_22 PF13401.6 ORF103125 - 2.9e-06 27.6 0.2 0.0041 17.4 0.1 2.5 1 1 1 2 2 2 2 AAA domain AAA_2 PF07724.14 ORF103125 - 4.9e-06 26.8 0.0 1.2e-05 25.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 ORF103125 - 1.3e-05 24.5 0.0 2.4e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_5 PF07728.14 ORF103125 - 0.00014 21.9 0.1 0.00065 19.7 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF103125 - 0.00018 21.9 0.1 0.00088 19.7 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 ORF103125 - 0.0014 18.4 0.0 0.0028 17.4 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain ATPase PF06745.13 ORF103125 - 0.0032 16.9 0.1 0.13 11.6 0.0 2.4 1 1 0 2 2 2 1 KaiC IstB_IS21 PF01695.17 ORF103125 - 0.0095 15.7 0.0 0.018 14.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein TIP49 PF06068.13 ORF103125 - 0.021 14.1 0.2 0.052 12.8 0.1 1.6 1 1 1 2 2 2 0 TIP49 P-loop domain AAA_24 PF13479.6 ORF103125 - 0.023 14.4 0.1 0.078 12.7 0.1 2.0 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF103125 - 0.023 15.1 0.0 0.051 14.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF103125 - 0.024 14.4 0.1 0.12 12.0 0.0 2.1 3 0 0 3 3 2 0 Sigma-54 interaction domain Prot_ATP_OB_N PF17758.1 ORF103125 - 0.026 14.2 0.2 0.074 12.7 0.0 1.9 2 0 0 2 2 1 0 Proteasomal ATPase OB N-terminal domain NACHT PF05729.12 ORF103125 - 0.027 14.4 0.1 0.24 11.3 0.1 2.2 1 1 1 2 2 2 0 NACHT domain AAA_3 PF07726.11 ORF103125 - 0.033 14.0 0.0 0.094 12.6 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF1128 PF06569.11 ORF103125 - 0.05 13.6 0.0 0.96 9.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1128) PhoH PF02562.16 ORF103125 - 0.05 13.0 0.2 0.29 10.6 0.1 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_14 PF13173.6 ORF103125 - 0.05 13.6 0.1 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 ORF103125 - 0.057 13.0 0.5 1.4 8.4 0.1 2.3 1 1 0 2 2 2 0 AAA domain AAA_28 PF13521.6 ORF103125 - 0.075 13.3 1.2 0.16 12.2 0.0 2.2 3 0 0 3 3 2 0 AAA domain AAA_33 PF13671.6 ORF103125 - 0.088 13.0 1.8 0.14 12.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF103125 - 0.088 12.0 0.1 0.84 8.8 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain Mg_chelatase PF01078.21 ORF103125 - 0.096 12.1 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TsaE PF02367.17 ORF103125 - 0.12 12.4 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 ORF103125 - 0.14 11.7 0.0 0.39 10.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF103125 - 0.14 12.6 0.0 0.37 11.3 0.0 2.0 1 1 0 1 1 1 0 ABC transporter AAA_30 PF13604.6 ORF103125 - 0.16 11.6 0.2 0.39 10.4 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF103125 - 0.33 11.5 0.0 0.33 11.5 0.0 2.8 3 0 0 3 3 2 0 AAA domain MFS_2 PF13347.6 ORF94313 - 1.3e-100 337.0 37.4 1.4e-100 336.8 37.4 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Xan_ur_permease PF00860.20 ORF93660 - 2.3e-42 145.1 51.4 2.3e-42 145.1 51.4 1.8 1 1 1 2 2 2 2 Permease family Tubulin PF00091.25 ORF92768 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF92768 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF92768 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF92768 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF92768 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Tubulin PF00091.25 ORF92755 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF92755 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF92755 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF92755 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF92755 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Tox-REase-2 PF15646.6 ORF91828 - 0.12 12.5 0.5 0.25 11.5 0.5 1.4 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 DUF3552 PF12072.8 ORF89140 - 0.0019 17.7 9.8 0.0019 17.7 9.8 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF3552) HemX PF04375.14 ORF89140 - 0.014 14.7 22.6 0.054 12.8 7.0 2.2 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF5082 PF16888.5 ORF89140 - 0.038 14.3 24.8 0.87 9.9 1.6 3.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) FAM76 PF16046.5 ORF89140 - 0.36 10.1 27.0 3.4 6.9 10.9 2.5 1 1 1 2 2 2 0 FAM76 protein Spc7 PF08317.11 ORF89140 - 0.59 9.0 33.5 2 7.2 13.1 2.6 1 1 1 3 3 3 0 Spc7 kinetochore protein TRAF_BIRC3_bd PF16673.5 ORF89140 - 0.94 9.3 13.4 0.55 10.1 2.5 2.8 1 1 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain TolA_bind_tri PF16331.5 ORF89140 - 1.2 9.2 19.2 7.3 6.8 4.9 3.2 1 1 2 3 3 3 0 TolA binding protein trimerisation DUF4200 PF13863.6 ORF89140 - 1.4 9.4 29.1 10 6.5 9.2 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Golgin_A5 PF09787.9 ORF89140 - 1.5 8.2 28.4 2.4 7.5 28.4 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF724 PF05266.14 ORF89140 - 2 8.2 20.5 1.5 8.6 15.6 2.7 2 1 2 4 4 3 0 Protein of unknown function (DUF724) HrpB7 PF09486.10 ORF89140 - 2.1 8.7 18.5 3.6 8.0 5.1 3.1 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) kleA_kleC PF17383.2 ORF89140 - 2.2 8.6 6.8 1.4 9.3 2.2 2.6 1 1 2 3 3 3 0 Uncharacterized KorC regulated protein A DUF16 PF01519.16 ORF89140 - 2.3 8.8 28.2 0.48 10.9 11.3 4.0 1 1 2 3 3 3 0 Protein of unknown function DUF16 DUF3450 PF11932.8 ORF89140 - 2.5 7.3 22.7 4.9 6.4 8.5 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Atg14 PF10186.9 ORF89140 - 2.6 7.1 34.2 0.093 11.8 19.2 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF966 PF06136.13 ORF89140 - 2.9 7.5 15.6 3.6 7.2 15.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF966) UPF0242 PF06785.11 ORF89140 - 4.7 7.3 34.7 1.4 9.0 16.6 2.9 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus MCC-bdg_PDZ PF10506.9 ORF89140 - 5.1 7.2 11.7 13 5.9 3.4 3.5 2 1 0 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome TMF_DNA_bd PF12329.8 ORF89140 - 5.4 7.1 39.7 0.27 11.2 11.9 4.1 1 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding DUF2968 PF11180.8 ORF89140 - 5.9 6.5 19.9 0.49 10.0 11.2 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF2968) EDR1 PF14381.6 ORF89140 - 7.6 6.2 7.5 1.5 8.5 3.7 1.8 2 1 0 2 2 2 0 Ethylene-responsive protein kinase Le-CTR1 HIP1_clath_bdg PF16515.5 ORF89140 - 8.6 7.1 25.5 0.76 10.4 15.3 2.6 1 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Tubulin PF00091.25 ORF81098 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF81098 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF81098 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF81098 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF81098 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like DUF4407 PF14362.6 ORF78861 - 0.098 12.0 4.5 0.16 11.3 4.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TAF PF02969.17 ORF78861 - 0.32 11.2 2.1 0.77 10.0 0.1 2.6 3 0 0 3 3 3 0 TATA box binding protein associated factor (TAF) LPD5 PF18799.1 ORF78861 - 0.66 10.4 6.8 1.2 9.5 6.3 1.7 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 Exonuc_VII_L PF02601.15 ORF78861 - 0.88 9.1 6.8 1.3 8.5 6.8 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit Pinin_SDK_memA PF04696.13 ORF78861 - 7.4 6.6 15.0 5.8 7.0 12.5 1.9 1 1 1 2 2 2 0 pinin/SDK/memA/ protein conserved region ABC_tran PF00005.27 ORF77030 - 2.8e-33 115.3 0.0 7.6e-33 113.9 0.0 1.8 1 1 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF77030 - 4.7e-10 39.6 3.9 6.3e-10 39.1 3.9 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF77030 - 2.6e-08 33.6 0.1 1.2e-06 28.1 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF77030 - 0.00059 20.3 0.0 0.0019 18.6 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain SbcCD_C PF13558.6 ORF77030 - 0.001 19.3 1.3 0.0072 16.5 0.5 2.6 2 1 0 2 2 1 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 ORF77030 - 0.0017 18.0 0.1 0.0037 17.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF77030 - 0.002 17.9 0.1 0.0042 16.9 0.1 1.6 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 ORF77030 - 0.0026 17.1 0.1 0.031 13.5 0.0 2.1 2 0 0 2 2 2 1 Zeta toxin AAA_21 PF13304.6 ORF77030 - 0.0077 16.1 0.0 0.022 14.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF365 PF04033.12 ORF77030 - 0.0081 16.4 1.0 0.048 13.9 0.1 2.7 3 1 1 4 4 4 1 Domain of unknown function (DUF365) AAA_22 PF13401.6 ORF77030 - 0.0083 16.4 0.0 0.52 10.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF77030 - 0.022 14.5 0.5 4.5 7.0 0.1 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein RsgA_GTPase PF03193.16 ORF77030 - 0.027 14.4 0.0 0.061 13.2 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase G-alpha PF00503.20 ORF77030 - 0.031 13.4 0.0 0.042 13.0 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit AAA_7 PF12775.7 ORF77030 - 0.071 12.6 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 ORF77030 - 0.095 12.7 0.0 1.9 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 ORF77030 - 0.1 12.3 0.0 0.65 9.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 ORF77030 - 0.1 12.0 0.1 7.1 6.0 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein MMR_HSR1 PF01926.23 ORF77030 - 0.13 12.4 0.1 0.39 10.8 0.1 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AA_permease_2 PF13520.6 ORF66784 - 7.5e-60 202.9 44.3 9.2e-60 202.6 44.3 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF66784 - 2e-33 115.7 41.6 4.9e-33 114.5 41.4 1.6 1 1 0 1 1 1 1 Amino acid permease Melittin PF01372.17 ORF66784 - 0.001 18.9 0.1 0.0048 16.8 0.1 2.3 1 0 0 1 1 1 1 Melittin GCFC PF07842.12 ORF63933 - 0.00016 21.4 0.0 0.0024 17.5 0.0 2.6 2 1 0 2 2 2 1 GC-rich sequence DNA-binding factor-like protein UPF0147 PF03685.13 ORF63933 - 0.0033 17.4 0.6 2.2 8.4 0.2 2.6 2 0 0 2 2 2 2 Uncharacterised protein family (UPF0147) Calc_CGRP_IAPP PF00214.19 ORF63933 - 1.5 9.2 0.0 1.5 9.2 0.0 2.6 3 0 0 3 3 3 0 Calcitonin / CGRP / IAPP family MCM PF00493.23 ORF60642 - 2.3e-72 242.7 0.1 3.1e-72 242.3 0.1 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 ORF60642 - 3.8e-21 75.3 2.6 7.3e-21 74.4 2.6 1.5 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 ORF60642 - 3.4e-08 33.1 0.3 1e-07 31.6 0.1 2.0 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 ORF60642 - 7.1e-05 22.7 0.1 0.00019 21.3 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 ORF60642 - 0.00024 21.6 0.0 0.0037 17.7 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 ORF60642 - 0.015 15.1 2.0 0.015 15.1 2.0 2.1 2 0 0 2 2 2 0 AAA lid domain Sigma54_activat PF00158.26 ORF60642 - 0.08 12.6 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain GntP_permease PF02447.16 ORF59289 - 8.9e-166 551.9 47.5 1e-165 551.7 47.5 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 ORF59289 - 1.6e-12 47.3 55.0 1.6e-12 47.3 55.0 2.3 1 1 1 2 2 2 1 Citrate transporter Na_H_antiport_2 PF13726.6 ORF59289 - 0.011 15.9 4.3 0.011 15.9 4.3 3.9 3 1 1 4 4 4 0 Na+-H+ antiporter family Tubulin PF00091.25 ORF57229 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF57229 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF57229 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF57229 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF57229 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like SlyX PF04102.12 ORF53723 - 0.12 13.0 0.4 0.37 11.4 0.4 1.8 1 0 0 1 1 1 0 SlyX PAN_2 PF08276.11 ORF4648 - 2.9e-06 27.3 14.9 0.45 10.7 1.8 4.5 4 0 0 4 4 4 4 PAN-like domain PAN_4 PF14295.6 ORF4648 - 0.059 13.3 19.0 2.8 7.9 0.8 4.6 4 0 0 4 4 4 0 PAN domain MANEC PF07502.14 ORF4648 - 0.29 11.4 12.4 4.5 7.6 0.1 3.7 4 0 0 4 4 4 0 MANEC domain PAN_3 PF08277.12 ORF4648 - 8.3 6.3 19.8 1.4 8.8 0.7 4.4 4 2 1 5 5 5 0 PAN-like domain UBA PF00627.31 ORF42837 - 2.4e-25 88.0 2.3 7.7e-13 48.1 0.2 2.5 2 0 0 2 2 2 2 UBA/TS-N domain ubiquitin PF00240.23 ORF42837 - 6.4e-20 70.7 1.3 1.1e-19 69.9 1.3 1.4 1 0 0 1 1 1 1 Ubiquitin family XPC-binding PF09280.11 ORF42837 - 7.2e-14 51.3 12.6 1.3e-13 50.5 12.6 1.4 1 0 0 1 1 1 1 XPC-binding domain Rad60-SLD PF11976.8 ORF42837 - 9.6e-10 38.2 4.9 1.5e-09 37.5 4.9 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 ORF42837 - 0.0016 18.5 0.3 0.004 17.2 0.3 1.7 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF42837 - 0.028 14.9 0.3 0.065 13.7 0.3 1.6 1 0 0 1 1 1 0 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF42837 - 0.042 13.9 0.7 0.1 12.7 0.3 1.8 1 1 1 2 2 2 0 Ubiquitin-like domain UN_NPL4 PF11543.8 ORF42837 - 0.052 14.0 0.1 0.21 12.1 0.1 1.9 2 1 0 2 2 2 0 Nuclear pore localisation protein NPL4 DUF4407 PF14362.6 ORF42091 - 0.098 12.0 4.5 0.16 11.3 4.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TAF PF02969.17 ORF42091 - 0.32 11.2 2.1 0.77 10.0 0.1 2.6 3 0 0 3 3 3 0 TATA box binding protein associated factor (TAF) LPD5 PF18799.1 ORF42091 - 0.66 10.4 6.8 1.2 9.5 6.3 1.7 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 Exonuc_VII_L PF02601.15 ORF42091 - 0.88 9.1 6.8 1.3 8.5 6.8 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit Pinin_SDK_memA PF04696.13 ORF42091 - 7.4 6.6 15.0 5.8 7.0 12.5 1.9 1 1 1 2 2 2 0 pinin/SDK/memA/ protein conserved region Tubulin PF00091.25 ORF36108 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF36108 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF36108 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF36108 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF36108 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Tubulin PF00091.25 ORF26976 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF26976 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF26976 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF26976 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF26976 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like DUF4423 PF14394.6 ORF25468 - 0.14 11.9 0.1 0.25 11.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) UBA PF00627.31 ORF24676 - 2.4e-25 88.0 2.3 7.7e-13 48.1 0.2 2.5 2 0 0 2 2 2 2 UBA/TS-N domain ubiquitin PF00240.23 ORF24676 - 6.4e-20 70.7 1.3 1.1e-19 69.9 1.3 1.4 1 0 0 1 1 1 1 Ubiquitin family XPC-binding PF09280.11 ORF24676 - 7.2e-14 51.3 12.6 1.3e-13 50.5 12.6 1.4 1 0 0 1 1 1 1 XPC-binding domain Rad60-SLD PF11976.8 ORF24676 - 9.6e-10 38.2 4.9 1.5e-09 37.5 4.9 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 ORF24676 - 0.0016 18.5 0.3 0.004 17.2 0.3 1.7 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF24676 - 0.028 14.9 0.3 0.065 13.7 0.3 1.6 1 0 0 1 1 1 0 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF24676 - 0.042 13.9 0.7 0.1 12.7 0.3 1.8 1 1 1 2 2 2 0 Ubiquitin-like domain UN_NPL4 PF11543.8 ORF24676 - 0.052 14.0 0.1 0.21 12.1 0.1 1.9 2 1 0 2 2 2 0 Nuclear pore localisation protein NPL4 DUF2321 PF10083.9 ORF24391 - 0.17 11.5 4.2 0.72 9.5 0.6 2.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) FAD_binding_3 PF01494.19 ORF23587 - 1e-17 64.5 0.1 2.4e-17 63.2 0.1 1.6 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF23587 - 2.8e-06 26.8 0.0 4.5e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF23587 - 0.00049 19.3 0.9 0.057 12.5 0.6 2.7 3 0 0 3 3 3 1 FAD binding domain NAD_binding_8 PF13450.6 ORF23587 - 0.0051 17.0 0.1 0.036 14.3 0.3 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 ORF23587 - 0.03 13.0 0.5 0.066 11.9 0.5 1.5 1 0 0 1 1 1 0 HI0933-like protein Thi4 PF01946.17 ORF23587 - 0.03 13.6 0.1 0.063 12.5 0.1 1.4 1 0 0 1 1 1 0 Thi4 family SE PF08491.10 ORF23587 - 0.03 13.4 0.0 0.054 12.5 0.0 1.3 1 0 0 1 1 1 0 Squalene epoxidase Pyr_redox PF00070.27 ORF23587 - 0.089 13.4 0.0 6.2 7.5 0.1 2.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase SSF PF00474.17 ORF1846 - 2.3e-10 39.9 10.1 4.9e-10 38.8 10.1 1.6 1 1 0 1 1 1 1 Sodium:solute symporter family Neurensin PF14927.6 ORF1846 - 0.22 11.2 0.1 0.22 11.2 0.1 2.3 2 0 0 2 2 2 0 Neurensin Ion_trans PF00520.31 ORF16896 - 1.2e-22 80.4 20.2 1.6e-22 80.0 20.2 1.1 1 0 0 1 1 1 1 Ion transport protein Imm_superinfect PF14373.6 ORF16896 - 0.061 13.3 1.9 0.16 12.0 1.9 1.7 1 0 0 1 1 1 0 Superinfection immunity protein EF-hand_1 PF00036.32 ORF16896 - 0.084 12.5 0.9 1.6 8.5 0.0 3.1 3 0 0 3 3 3 0 EF hand EF-hand_6 PF13405.6 ORF16896 - 0.14 12.1 0.1 1.1 9.4 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain DUF4407 PF14362.6 ORF16515 - 0.098 12.0 4.5 0.16 11.3 4.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TAF PF02969.17 ORF16515 - 0.32 11.2 2.1 0.77 10.0 0.1 2.6 3 0 0 3 3 3 0 TATA box binding protein associated factor (TAF) LPD5 PF18799.1 ORF16515 - 0.66 10.4 6.8 1.2 9.5 6.3 1.7 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 Exonuc_VII_L PF02601.15 ORF16515 - 0.88 9.1 6.8 1.3 8.5 6.8 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit Pinin_SDK_memA PF04696.13 ORF16515 - 7.4 6.6 15.0 5.8 7.0 12.5 1.9 1 1 1 2 2 2 0 pinin/SDK/memA/ protein conserved region zf-RING_2 PF13639.6 ORF108473 - 1.2e-06 28.7 5.4 1.2e-05 25.6 2.8 2.5 2 0 0 2 2 2 1 Ring finger domain RWD PF05773.22 ORF108473 - 1.7e-06 28.3 0.0 7.2e-06 26.3 0.0 2.1 2 0 0 2 2 2 1 RWD domain zf-RING_11 PF17123.5 ORF108473 - 4.5e-05 23.1 6.9 9.5e-05 22.1 6.9 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF108473 - 0.0013 19.0 1.2 0.0013 19.0 1.2 2.3 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF108473 - 0.0013 18.7 0.4 0.0013 18.7 0.4 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF108473 - 0.0041 16.9 2.3 0.0041 16.9 2.3 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3H2C3 PF17122.5 ORF108473 - 0.0055 16.7 1.9 0.0055 16.7 1.9 1.8 2 0 0 2 2 1 1 Zinc-finger Zn_ribbon_17 PF17120.5 ORF108473 - 0.009 15.6 2.5 0.009 15.6 2.5 1.8 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF108473 - 0.0097 16.1 2.3 0.039 14.1 1.2 2.2 2 0 0 2 2 2 1 FANCL C-terminal domain zf-ANAPC11 PF12861.7 ORF108473 - 0.01 15.9 1.1 0.017 15.1 0.2 1.8 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF108473 - 0.016 15.1 4.6 0.36 10.7 1.7 2.4 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF108473 - 0.021 14.7 2.5 0.086 12.8 0.7 2.4 2 0 0 2 2 2 0 zinc-RING finger domain zf-HC5HC2H_2 PF13832.6 ORF108473 - 0.03 14.5 0.4 0.062 13.5 0.4 1.5 1 0 0 1 1 1 0 PHD-zinc-finger like domain zf-C3HC4 PF00097.25 ORF108473 - 0.092 12.6 3.7 0.22 11.5 1.4 2.4 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) CENP-H PF05837.12 ORF108473 - 0.16 12.4 18.1 0.13 12.7 9.2 2.6 2 1 0 2 2 2 0 Centromere protein H (CENP-H) Spc7 PF08317.11 ORF108473 - 5.8 5.7 26.4 0.42 9.5 16.1 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein Prok-RING_4 PF14447.6 ORF108473 - 9.7 6.1 8.0 14 5.6 4.0 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 RRM_1 PF00076.22 ORF10772 - 4.8e-16 58.3 3.1 1.9e-09 37.2 1.7 2.7 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PABP PF00658.18 ORF10772 - 7.5e-12 45.3 0.1 1.3e-11 44.5 0.1 1.4 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain NpwBP PF12622.7 ORF10772 - 3.3 8.5 18.5 18 6.2 2.3 3.9 2 1 1 3 3 3 0 mRNA biogenesis factor Tubulin PF00091.25 ORF106731 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF106731 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF106731 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF106731 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF106731 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like eIF-3_zeta PF05091.12 ORF105793 - 6.9 5.5 9.7 9.6 5.1 9.7 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) UBA PF00627.31 ORF104234 - 2.4e-25 88.0 2.3 7.7e-13 48.1 0.2 2.5 2 0 0 2 2 2 2 UBA/TS-N domain ubiquitin PF00240.23 ORF104234 - 6.4e-20 70.7 1.3 1.1e-19 69.9 1.3 1.4 1 0 0 1 1 1 1 Ubiquitin family XPC-binding PF09280.11 ORF104234 - 7.2e-14 51.3 12.6 1.3e-13 50.5 12.6 1.4 1 0 0 1 1 1 1 XPC-binding domain Rad60-SLD PF11976.8 ORF104234 - 9.6e-10 38.2 4.9 1.5e-09 37.5 4.9 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 ORF104234 - 0.0016 18.5 0.3 0.004 17.2 0.3 1.7 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF104234 - 0.028 14.9 0.3 0.065 13.7 0.3 1.6 1 0 0 1 1 1 0 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF104234 - 0.042 13.9 0.7 0.1 12.7 0.3 1.8 1 1 1 2 2 2 0 Ubiquitin-like domain UN_NPL4 PF11543.8 ORF104234 - 0.052 14.0 0.1 0.21 12.1 0.1 1.9 2 1 0 2 2 2 0 Nuclear pore localisation protein NPL4 Pkinase PF00069.25 ORF103230 - 1.4e-21 77.1 0.0 3.5e-21 75.8 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain Sina PF03145.16 NODE_10743_length_1334_cov_4.533487_g7950_i0reverse_frame_3 - 0.37 10.7 2.7 1.1 9.1 0.2 2.3 2 0 0 2 2 2 0 Seven in absentia protein family Pou PF00157.17 NODE_10743_length_1334_cov_4.533487_g7950_i0forward_frame_3 - 0.054 13.5 8.8 16 5.5 0.1 4.7 2 1 2 4 4 4 0 Pou domain - N-terminal to homeobox domain 4HBT PF03061.22 ORF92310 - 0.00012 22.3 0.0 0.00023 21.5 0.0 1.4 1 0 0 1 1 1 1 Thioesterase superfamily EGF_alliinase PF04863.13 ORF87981 - 1 9.8 0.0 1 9.8 0.0 3.0 3 0 0 3 3 3 0 Alliinase EGF-like domain PEP-utilizers_C PF02896.18 ORF86780 - 3.6e-88 295.5 0.3 4.7e-88 295.1 0.3 1.0 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF86780 - 0.056 13.2 1.7 0.14 11.9 0.2 2.3 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain PEP-utilizers_C PF02896.18 ORF82216 - 3.6e-88 295.5 0.3 4.7e-88 295.1 0.3 1.0 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF82216 - 0.056 13.2 1.7 0.14 11.9 0.2 2.3 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain SET PF00856.28 ORF74280 - 8.2e-10 39.3 0.0 2.3e-09 37.9 0.0 1.8 1 0 0 1 1 1 1 SET domain FAD_binding_3 PF01494.19 ORF6580 - 4e-15 55.9 4.1 5.3e-14 52.2 4.1 2.4 1 1 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF6580 - 0.00096 18.3 0.0 0.018 14.1 0.0 2.0 1 1 0 1 1 1 1 Squalene epoxidase Trp_halogenase PF04820.14 ORF6580 - 0.0013 17.7 0.0 0.026 13.4 0.0 2.3 2 0 0 2 2 2 1 Tryptophan halogenase Pyr_redox_2 PF07992.14 ORF6580 - 0.0054 16.0 0.1 0.01 15.1 0.0 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF6580 - 0.0094 16.2 0.0 0.024 14.9 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain IlvN PF07991.12 ORF6580 - 0.034 13.7 0.0 0.085 12.4 0.0 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_9 PF13454.6 ORF6580 - 0.036 14.0 0.0 0.22 11.5 0.0 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding BAR PF03114.18 ORF5584 - 0.051 13.2 3.5 2.2 7.8 0.3 2.3 2 0 0 2 2 2 0 BAR domain tRNA-synt_1b PF00579.25 ORF51928 - 0.013 14.8 0.2 0.026 13.9 0.2 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) Cyclin_N PF00134.23 ORF50182 - 5.9e-32 110.1 3.8 5.5e-29 100.5 0.4 2.7 2 0 0 2 2 2 2 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF50182 - 2.3e-17 63.2 3.0 3.6e-17 62.5 1.8 2.0 2 0 0 2 2 2 1 Cyclin, C-terminal domain TPR_16 PF13432.6 ORF44669 - 0.044 14.4 9.2 0.35 11.6 8.3 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF44669 - 0.14 11.9 2.2 7.6 6.3 0.2 3.0 3 0 0 3 3 3 0 TPR repeat TPR_2 PF07719.17 ORF44669 - 0.29 11.3 9.3 8 6.8 0.1 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF44669 - 0.51 10.2 2.6 20 5.2 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat FMN_dh PF01070.18 ORF44500 - 2.6e-120 401.6 0.0 3.2e-120 401.3 0.0 1.1 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Glu_synthase PF01645.17 ORF44500 - 2.1e-06 27.1 0.3 3.4e-06 26.5 0.3 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase IMPDH PF00478.25 ORF44500 - 8.8e-06 24.9 2.4 3.7e-05 22.9 1.3 2.4 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 ORF44500 - 6.9e-05 22.2 1.2 0.047 12.9 0.1 2.2 1 1 1 2 2 2 2 Dihydroorotate dehydrogenase NMO PF03060.15 ORF44500 - 0.00042 19.8 0.9 0.00093 18.7 0.9 1.6 1 0 0 1 1 1 1 Nitronate monooxygenase ThiG PF05690.14 ORF44500 - 0.00064 19.1 1.4 0.037 13.3 0.1 2.4 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 ORF44500 - 0.0039 16.7 0.1 0.054 13.0 0.0 2.2 1 1 1 2 2 2 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 ORF44500 - 0.0066 15.9 0.0 0.19 11.1 0.0 2.2 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator Dus PF01207.17 ORF44500 - 0.01 15.0 0.1 0.8 8.7 0.1 2.2 1 1 1 2 2 2 0 Dihydrouridine synthase (Dus) TMP-TENI PF02581.17 ORF44500 - 0.049 13.0 0.4 0.21 10.9 0.1 2.1 2 0 0 2 2 2 0 Thiamine monophosphate synthase AP_endonuc_2 PF01261.24 ORF4139 - 3.3e-05 23.4 0.1 0.0027 17.2 0.0 2.6 2 1 1 3 3 3 2 Xylose isomerase-like TIM barrel SAP30_Sin3_bdg PF13867.6 ORF4139 - 0.12 12.7 0.7 0.39 11.1 0.1 2.2 3 0 0 3 3 3 0 Sin3 binding region of histone deacetylase complex subunit SAP30 Vps52 PF04129.12 ORF34235 - 2.5e-35 122.2 17.3 4.6e-35 121.3 17.3 1.4 1 0 0 1 1 1 1 Vps52 / Sac2 family DUF885 PF05960.11 ORF34235 - 0.00049 19.9 0.0 0.00061 19.6 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF885) ComGF PF15980.5 ORF34235 - 0.067 13.6 0.5 0.067 13.6 0.5 2.8 3 1 0 3 3 3 0 Putative Competence protein ComGF tRNA-synt_1b PF00579.25 ORF27205 - 0.013 14.8 0.2 0.026 13.9 0.2 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) Sulfotransfer_1 PF00685.27 ORF24927 - 2.3e-15 56.8 2.4 1e-14 54.7 2.6 1.8 2 0 0 2 2 2 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF24927 - 1.2e-07 32.4 0.1 5.9e-07 30.1 0.1 2.0 1 1 1 2 2 2 1 Sulfotransferase family Sulfotransfer_2 PF03567.14 ORF24927 - 0.011 15.6 0.9 0.033 14.1 0.9 1.8 1 1 0 1 1 1 0 Sulfotransferase family Bac_DnaA PF00308.18 ORF18914 - 2.4e-99 331.6 0.2 3.7e-99 331.0 0.2 1.3 1 0 0 1 1 1 1 Bacterial dnaA protein Bac_DnaA_C PF08299.11 ORF18914 - 4.2e-33 113.2 0.3 1.2e-32 111.7 0.1 1.9 2 0 0 2 2 2 1 Bacterial dnaA protein helix-turn-helix DnaA_N PF11638.8 ORF18914 - 4.4e-11 42.4 0.1 1.1e-10 41.1 0.1 1.7 1 0 0 1 1 1 1 DnaA N-terminal domain IstB_IS21 PF01695.17 ORF18914 - 1.1e-10 41.5 0.0 2.1e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 ORF18914 - 2.3e-06 28.1 0.0 1.4e-05 25.6 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Kinesin PF00225.23 ORF18914 - 0.00041 19.4 0.0 0.00096 18.2 0.0 1.6 1 1 0 1 1 1 1 Kinesin motor domain AAA_14 PF13173.6 ORF18914 - 0.00094 19.2 0.1 0.015 15.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF18914 - 0.0022 18.4 0.1 0.012 16.0 0.1 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF18914 - 0.011 16.0 3.2 1.8 8.8 1.4 3.2 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 ORF18914 - 0.016 15.2 0.0 0.037 14.0 0.0 1.7 1 0 0 1 1 1 0 NACHT domain AFG1_ATPase PF03969.16 ORF18914 - 0.023 13.6 0.2 0.058 12.3 0.2 1.7 1 1 0 1 1 1 0 AFG1-like ATPase ATPase_2 PF01637.18 ORF18914 - 0.037 13.9 0.1 0.12 12.3 0.1 1.9 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea BLOC1S3 PF15753.5 ORF18914 - 0.09 12.9 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 RNA_helicase PF00910.22 ORF18914 - 0.12 12.8 0.0 0.44 11.0 0.0 2.0 1 1 0 1 1 1 0 RNA helicase AAA_19 PF13245.6 ORF18914 - 0.15 12.4 0.1 0.58 10.5 0.1 2.1 1 1 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 ORF16603 - 2.9e-11 43.4 0.0 4e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain RsgA_GTPase PF03193.16 ORF16603 - 0.12 12.2 0.0 0.34 10.8 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase Cupin_4 PF08007.12 ORF14543 - 3.6e-11 43.1 0.3 5.1e-11 42.6 0.3 1.3 1 0 0 1 1 1 1 Cupin superfamily protein GDC-P PF02347.16 ORF11682 - 9.9e-09 34.5 1.0 2.8e-07 29.7 0.2 2.1 1 1 1 2 2 2 2 Glycine cleavage system P-protein Beta_elim_lyase PF01212.21 ORF11682 - 7.8e-08 31.9 0.1 1.2e-07 31.4 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 ORF11682 - 0.0023 16.9 0.1 0.0033 16.4 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Pyridoxal_deC PF00282.19 ORF11682 - 0.074 11.7 0.0 6.6 5.3 0.0 2.1 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain TPR_12 PF13424.6 ORF100275 - 8.4e-22 77.3 2.1 1.1e-10 41.6 0.0 5.2 4 2 2 6 6 6 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF100275 - 1.6e-10 40.3 4.9 0.0013 18.4 0.0 4.5 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF100275 - 4.9e-08 32.6 2.1 0.11 12.7 0.0 4.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF100275 - 9.3e-08 31.6 9.5 0.16 12.2 0.0 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF100275 - 1.6e-07 30.9 0.7 0.45 10.6 0.0 5.4 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF100275 - 2.8e-07 30.2 15.0 0.036 13.9 0.3 6.6 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF100275 - 7.4e-06 26.4 10.8 0.26 11.8 0.3 4.8 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 ORF100275 - 0.019 14.6 0.5 28 4.5 0.0 4.1 5 0 0 5 5 5 0 TPR repeat ANAPC3 PF12895.7 ORF100275 - 0.027 14.7 0.3 11 6.3 0.1 3.4 1 1 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 ORF100275 - 0.076 13.4 4.1 0.48 10.9 0.0 4.3 6 0 0 6 6 6 0 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF100275 - 0.083 12.3 0.1 2.5 7.5 0.1 2.3 1 1 1 2 2 2 0 Coatomer epsilon subunit TPR_14 PF13428.6 ORF100275 - 0.67 10.9 0.0 0.67 10.9 0.0 6.1 5 2 2 7 7 7 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF100275 - 1.9 9.3 12.5 50 4.8 0.0 5.9 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF100275 - 6 7.8 12.0 36 5.4 0.2 5.5 6 0 0 6 6 5 0 Tetratricopeptide repeat Tmemb_18A PF09771.9 NODE_10801_length_1330_cov_596.352896_g2408_i1reverse_frame_2 - 0.019 15.4 1.2 0.046 14.1 0.1 2.2 2 0 0 2 2 2 0 Transmembrane protein 188 DUF938 PF06080.12 ORF98140 - 0.072 12.8 0.0 0.92 9.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF938) HipA_C PF07804.12 ORF94637 - 4.3e-20 72.3 0.0 6.1e-20 71.8 0.0 1.2 1 0 0 1 1 1 1 HipA-like C-terminal domain MarR_2 PF12802.7 ORF94637 - 0.087 12.7 0.4 0.45 10.4 0.2 2.2 2 0 0 2 2 2 0 MarR family AMPK1_CBM PF16561.5 ORF89790 - 0.0018 18.4 0.1 0.057 13.6 0.0 2.5 2 0 0 2 2 2 1 Glycogen recognition site of AMP-activated protein kinase Aa_trans PF01490.18 ORF89506 - 3.4e-53 180.8 15.1 4.2e-53 180.5 15.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein 7tm_7 PF08395.12 ORF89506 - 0.022 14.0 0.8 0.051 12.8 0.4 1.8 1 1 0 1 1 1 0 7tm Chemosensory receptor COX14 PF14880.6 ORF89506 - 0.29 11.0 0.1 0.29 11.0 0.1 3.3 3 0 0 3 3 3 0 Cytochrome oxidase c assembly DUF3040 PF11239.8 ORF89506 - 3.5 8.0 10.1 0.85 9.9 0.2 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF3040) SAC3_GANP PF03399.16 ORF88617 - 1.5e-51 175.5 1.4 2.5e-51 174.8 1.4 1.3 1 0 0 1 1 1 1 SAC3/GANP family Bacteroid_pep PF14406.6 ORF88617 - 0.021 15.2 2.8 3.3 8.2 0.6 3.1 2 0 0 2 2 2 0 Ribosomally synthesized peptide in Bacteroidetes HMD PF03201.16 ORF88617 - 0.17 12.1 0.2 2.9 8.2 0.0 2.3 2 0 0 2 2 2 0 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase Aa_trans PF01490.18 ORF88419 - 1e-33 116.7 22.1 1.2e-33 116.5 22.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Sugar_tr PF00083.24 ORF88222 - 3e-52 178.0 23.9 4.3e-52 177.5 23.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF88222 - 5.2e-36 124.3 63.2 1.4e-33 116.3 33.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily bZIP_1 PF00170.21 ORF82356 - 7.4e-07 29.2 13.3 7.4e-07 29.2 13.3 3.0 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF82356 - 1.8e-06 28.0 13.4 1.8e-06 28.0 13.4 2.9 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF82356 - 0.053 13.3 1.1 0.1 12.3 1.1 1.4 1 0 0 1 1 1 0 Peptidase M76 family DUF5320 PF17253.2 ORF82356 - 2.6 9.1 5.2 0.85 10.7 1.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Tmemb_55A PF09788.9 ORF70486 - 0.11 11.6 0.1 0.4 9.7 0.0 2.0 1 1 1 2 2 2 0 Transmembrane protein 55A Trp_Tyr_perm PF03222.13 ORF70486 - 0.18 10.8 29.8 0.32 10.0 29.8 1.4 1 1 0 1 1 1 0 Tryptophan/tyrosine permease family GAF PF01590.26 ORF5386 - 1.1e-07 32.6 0.0 0.00032 21.4 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 ORF5386 - 0.0081 16.5 0.0 1.5 9.1 0.0 3.4 2 2 0 2 2 2 1 GAF domain tify PF06200.14 ORF5386 - 0.17 11.3 0.2 0.41 10.0 0.2 1.6 1 0 0 1 1 1 0 tify domain BTB PF00651.31 ORF5026 - 1.4e-22 80.0 1.2 3e-21 75.7 0.1 2.6 2 1 0 2 2 2 1 BTB/POZ domain BACK PF07707.15 ORF5026 - 0.084 13.0 0.4 1.6 8.9 0.1 2.5 2 0 0 2 2 2 0 BTB And C-terminal Kelch Ank_2 PF12796.7 ORF29662 - 7.5e-14 52.1 0.1 0.00031 21.3 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF29662 - 3.4e-13 49.8 0.4 0.0014 19.2 0.0 6.2 3 2 3 6 6 6 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF29662 - 5.5e-13 48.9 2.3 0.00034 20.9 0.0 4.5 4 0 0 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF29662 - 4.6e-11 42.7 7.0 1.7e-05 25.0 0.0 4.9 5 0 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF29662 - 2.6e-10 39.6 1.4 0.00069 19.9 0.0 6.4 6 0 0 6 6 6 1 Ankyrin repeat DUF3552 PF12072.8 ORF27212 - 0.0018 17.7 9.7 0.0018 17.7 9.7 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF3552) HemX PF04375.14 ORF27212 - 0.014 14.7 22.6 0.054 12.8 7.0 2.2 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF5082 PF16888.5 ORF27212 - 0.041 14.2 25.6 0.83 9.9 2.2 3.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) DUF966 PF06136.13 ORF27212 - 0.23 11.2 12.2 0.27 10.9 12.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF966) FAM76 PF16046.5 ORF27212 - 0.27 10.6 27.1 2.5 7.4 10.2 2.4 1 1 1 2 2 2 0 FAM76 protein Golgin_A5 PF09787.9 ORF27212 - 0.29 10.6 26.2 0.46 9.9 26.2 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 Spc7 PF08317.11 ORF27212 - 0.51 9.2 32.6 1.6 7.5 13.2 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein Atg14 PF10186.9 ORF27212 - 0.64 9.0 33.6 0.02 14.0 18.4 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 TRAF_BIRC3_bd PF16673.5 ORF27212 - 0.99 9.2 13.4 0.54 10.1 2.5 2.7 1 1 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF724 PF05266.14 ORF27212 - 1.6 8.6 20.3 3.8 7.3 17.5 2.8 2 1 2 4 4 3 0 Protein of unknown function (DUF724) DUF16 PF01519.16 ORF27212 - 1.9 9.0 29.0 0.3 11.6 10.7 4.0 1 1 2 3 3 3 0 Protein of unknown function DUF16 DUF4200 PF13863.6 ORF27212 - 1.9 8.9 29.6 7 7.1 7.7 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) HrpB7 PF09486.10 ORF27212 - 2.2 8.6 18.6 4.1 7.8 5.2 3.1 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) kleA_kleC PF17383.2 ORF27212 - 2.3 8.6 6.9 1.5 9.2 2.3 2.7 1 1 2 3 3 3 0 Uncharacterized KorC regulated protein A DUF3450 PF11932.8 ORF27212 - 3.4 6.9 23.2 8.9 5.5 9.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) TMF_DNA_bd PF12329.8 ORF27212 - 4.5 7.3 39.6 0.3 11.1 12.0 4.1 1 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding MCC-bdg_PDZ PF10506.9 ORF27212 - 5.4 7.1 11.7 13 5.9 3.4 3.4 2 1 0 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF2968 PF11180.8 ORF27212 - 6 6.5 19.9 0.5 10.0 11.2 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF2968) UPF0242 PF06785.11 ORF27212 - 6.4 6.8 35.1 1.4 9.0 16.8 2.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus HIP1_clath_bdg PF16515.5 ORF27212 - 9.4 6.9 25.6 0.79 10.4 15.3 2.6 1 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TolA_bind_tri PF16331.5 ORF27212 - 9.4 6.4 22.5 7.3 6.7 4.9 3.4 2 1 2 4 4 3 0 TolA binding protein trimerisation APG6_N PF17675.1 ORF27212 - 9.7 6.7 31.1 2.8 8.5 5.8 2.4 1 1 1 2 2 2 0 Apg6 coiled-coil region MFS_1 PF07690.16 ORF18759 - 7.1e-34 117.3 25.3 1.2e-33 116.5 25.3 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF18759 - 1.9e-07 30.3 24.4 1e-06 28.0 13.5 2.1 1 1 1 2 2 2 2 Sugar (and other) transporter AAA_2 PF07724.14 ORF18440 - 7.8e-52 175.8 0.7 1.2e-42 145.9 0.2 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA PF00004.29 ORF18440 - 2.5e-16 60.3 0.1 7.1e-07 29.7 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF18440 - 8.3e-08 32.3 0.2 3.8e-06 27.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF18440 - 3.1e-07 30.7 0.0 0.00012 22.4 0.0 2.5 2 0 0 2 2 2 1 AAA domain ClpB_D2-small PF10431.9 ORF18440 - 4.2e-06 26.7 0.9 2.4e-05 24.3 0.0 2.5 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein MCM PF00493.23 ORF18440 - 2.6e-05 23.4 0.3 0.0016 17.6 0.0 2.3 2 0 0 2 2 2 1 MCM P-loop domain Mg_chelatase PF01078.21 ORF18440 - 0.0002 20.8 0.3 0.0039 16.6 0.0 2.9 3 1 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 ORF18440 - 0.00023 21.6 1.7 0.00056 20.3 0.6 2.3 2 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF18440 - 0.00057 19.7 0.2 0.059 13.1 0.0 2.8 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 ORF18440 - 0.0011 18.6 0.1 0.019 14.6 0.0 2.6 2 1 0 2 2 2 1 Sigma-54 interaction domain AAA_18 PF13238.6 ORF18440 - 0.0014 19.2 0.1 0.0054 17.3 0.0 2.1 2 0 0 2 2 1 1 AAA domain AAA_14 PF13173.6 ORF18440 - 0.0083 16.2 0.1 2.1 8.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain TniB PF05621.11 ORF18440 - 0.0084 15.5 0.3 0.022 14.2 0.0 2.0 2 0 0 2 2 2 1 Bacterial TniB protein IstB_IS21 PF01695.17 ORF18440 - 0.0089 15.8 0.3 0.032 14.0 0.0 1.9 2 1 0 2 2 2 1 IstB-like ATP binding protein AAA_33 PF13671.6 ORF18440 - 0.013 15.7 0.0 0.026 14.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF18440 - 0.013 15.8 1.6 0.2 11.9 0.2 2.8 2 1 1 3 3 2 0 AAA domain TIP49 PF06068.13 ORF18440 - 0.014 14.6 0.6 0.041 13.1 0.0 1.9 2 0 0 2 2 2 0 TIP49 P-loop domain AAA_24 PF13479.6 ORF18440 - 0.023 14.4 0.2 0.12 12.1 0.2 2.2 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF18440 - 0.043 13.3 0.0 0.13 11.8 0.0 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 ORF18440 - 0.05 13.6 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 ORF18440 - 0.051 13.5 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase DEAD PF00270.29 ORF18440 - 0.064 13.0 0.0 1.3 8.7 0.0 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase SRP54 PF00448.22 ORF18440 - 0.073 12.7 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Zeta_toxin PF06414.12 ORF18440 - 0.074 12.3 0.0 0.15 11.3 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin NTPase_1 PF03266.15 ORF18440 - 0.084 12.8 0.3 1.4 8.8 0.0 2.3 2 0 0 2 2 2 0 NTPase ABC_tran PF00005.27 ORF18440 - 0.1 13.1 0.0 0.31 11.6 0.0 1.8 1 1 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 ORF18440 - 0.11 12.9 0.0 1 9.7 0.0 2.2 2 0 0 2 2 2 0 RNA helicase ATP-synt_ab PF00006.25 ORF18440 - 0.14 11.7 0.0 0.39 10.3 0.0 1.7 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain ResIII PF04851.15 ORF18440 - 0.16 11.9 0.5 1.3 9.0 0.0 2.3 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 ORF18440 - 5 7.4 5.3 5.8 7.2 2.9 2.3 2 1 0 2 2 1 0 AAA domain Patatin PF01734.22 ORF16511 - 5.5e-23 82.2 0.0 8.5e-23 81.6 0.0 1.3 1 0 0 1 1 1 1 Patatin-like phospholipase PNRC PF15365.6 ORF16511 - 0.29 11.0 1.9 0.63 9.9 1.9 1.6 1 0 0 1 1 1 0 Proline-rich nuclear receptor coactivator motif DUF3960 PF13142.6 NODE_10932_length_1324_cov_5.776571_g8098_i0forward_frame_1 - 0.071 13.2 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3960) Amidohydro_1 PF01979.20 ORF9793 - 1.5e-53 182.3 0.0 1.8e-53 182.1 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF9793 - 0.0026 17.3 0.1 1.5 8.2 0.0 2.6 3 0 0 3 3 3 2 Amidohydrolase family Transpeptidase PF00905.22 ORF97487 - 3.1e-84 282.8 0.1 3.8e-84 282.5 0.1 1.1 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 ORF97487 - 7.1e-13 49.3 0.4 3.5e-11 43.8 0.4 2.3 1 1 0 1 1 1 1 Penicillin-binding Protein dimerisation domain DUF1616 PF07760.11 ORF97487 - 0.069 12.5 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) 2OG-FeII_Oxy_3 PF13640.6 ORF8749 - 0.034 15.1 0.0 0.077 13.9 0.0 1.6 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily HMG_box PF00505.19 ORF84522 - 4.3e-17 62.3 7.7 4.3e-17 62.3 7.7 3.1 3 0 0 3 3 3 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF84522 - 3.2e-11 43.6 7.7 3.2e-11 43.6 7.7 3.9 4 0 0 4 4 4 1 HMG-box domain PUB PF09409.10 ORF70561 - 1.6e-08 34.4 0.1 2.6e-08 33.7 0.1 1.3 1 0 0 1 1 1 1 PUB domain DUF5327 PF17261.2 ORF70561 - 0.13 13.1 0.1 0.13 13.1 0.1 4.0 4 1 0 4 4 4 0 Family of unknown function (DUF5327) 2OG-FeII_Oxy_3 PF13640.6 ORF67395 - 0.034 15.1 0.0 0.077 13.9 0.0 1.6 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily zf-C3HC4_3 PF13920.6 ORF63925 - 2.9e-05 23.9 9.8 2.9e-05 23.9 9.8 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF63925 - 0.0002 21.1 14.5 0.00032 20.5 14.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF63925 - 0.0003 21.0 13.6 0.00051 20.3 13.6 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_10 PF16685.5 ORF63925 - 0.00084 19.4 7.8 0.0016 18.5 7.8 1.4 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-C3HC4 PF00097.25 ORF63925 - 0.0099 15.7 11.8 0.016 15.1 11.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 ORF63925 - 0.012 15.4 3.7 0.029 14.2 3.7 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-C3HC4_4 PF15227.6 ORF63925 - 0.027 14.6 13.0 0.046 13.9 13.0 1.4 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF63925 - 0.16 11.9 9.2 0.3 11.1 9.2 1.5 1 0 0 1 1 1 0 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF63925 - 0.44 10.6 12.3 0.77 9.8 12.3 1.4 1 0 0 1 1 1 0 RING-type zinc-finger zf-Nse PF11789.8 ORF63925 - 3.7 7.5 5.8 7.5 6.5 5.8 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-rbx1 PF12678.7 ORF63925 - 8.6 6.7 13.4 22 5.4 13.4 1.7 1 1 0 1 1 1 0 RING-H2 zinc finger domain DUF4157 PF13699.6 ORF6225 - 0.017 15.4 0.3 17 5.7 0.0 4.1 5 0 0 5 5 5 0 Domain of unknown function (DUF4157) PAN_4 PF14295.6 ORF6225 - 0.26 11.2 8.7 0.37 10.7 0.8 2.6 1 1 1 2 2 2 0 PAN domain DUF3439 PF11921.8 ORF6225 - 0.39 10.7 10.3 0.22 11.5 7.9 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) CRAL_TRIO PF00650.20 ORF57612 - 1.5e-14 54.0 0.1 2.3e-14 53.4 0.1 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF57612 - 0.00016 21.8 0.0 0.00027 21.1 0.0 1.3 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain NIF PF03031.18 ORF53037 - 1.3e-46 158.2 0.8 2.4e-46 157.3 0.8 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase SHIPPO-rpt PF07004.12 ORF4871 - 9.1e-26 89.6 93.5 0.0096 16.8 0.3 13.0 12 1 0 12 12 12 12 Sperm-tail PG-rich repeat SIS PF01380.22 ORF32441 - 1.6e-46 157.4 0.1 1.1e-23 83.6 0.0 2.2 2 0 0 2 2 2 2 SIS domain SIS_2 PF13580.6 ORF32441 - 0.0011 19.0 0.0 0.0033 17.5 0.0 1.8 1 1 0 1 1 1 1 SIS domain DUF1363 PF07101.11 ORF32441 - 0.11 12.8 0.0 4.3 7.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1363) Ion_trans PF00520.31 ORF19458 - 6.3e-25 87.8 16.3 8.9e-25 87.3 16.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF19458 - 3.5e-09 35.9 0.0 0.0045 16.8 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF19458 - 1.3e-08 33.8 0.0 0.0064 16.0 0.2 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF19458 - 1e-05 25.9 0.1 0.00036 20.9 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF19458 - 2.6e-05 23.5 0.1 0.06 12.9 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF19458 - 3.6e-05 23.5 0.3 0.039 13.8 0.2 2.6 2 0 0 2 2 2 2 EF-hand domain pair Gene66 PF02053.15 ORF19458 - 0.12 12.0 0.0 0.23 11.1 0.0 1.5 1 0 0 1 1 1 0 Gene 66 (IR5) protein PKD_channel PF08016.12 ORF19458 - 0.9 8.1 18.0 3 6.4 10.7 2.4 2 1 0 2 2 2 0 Polycystin cation channel HEAT PF02985.22 ORF18976 - 0.0046 17.1 0.0 0.02 15.1 0.0 2.1 2 0 0 2 2 2 1 HEAT repeat HEAT_2 PF13646.6 ORF18976 - 0.011 16.1 0.0 0.17 12.3 0.0 2.4 2 0 0 2 2 2 0 HEAT repeats Vac14_Fab1_bd PF12755.7 ORF18976 - 0.039 14.5 0.2 1.3 9.7 0.0 3.0 3 0 0 3 3 3 0 Vacuolar 14 Fab1-binding region DUF4580 PF15162.6 ORF18976 - 0.058 13.0 0.2 0.22 11.1 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4580) RTP1_C1 PF10363.9 ORF18976 - 0.063 13.5 0.1 0.29 11.3 0.0 2.2 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 2OG-FeII_Oxy_3 PF13640.6 ORF16912 - 0.034 15.1 0.0 0.077 13.9 0.0 1.6 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily NIF PF03031.18 ORF108096 - 1.3e-46 158.2 0.8 2.4e-46 157.3 0.8 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase 2OG-FeII_Oxy_3 PF13640.6 ORF10281 - 0.034 15.1 0.0 0.077 13.9 0.0 1.6 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Bgal_small_N PF02929.17 ORF102569 - 1.3e-43 149.3 0.0 1.7e-43 149.0 0.0 1.1 1 0 0 1 1 1 1 Beta galactosidase small chain SHIPPO-rpt PF07004.12 ORF100404 - 4.4e-26 90.5 93.9 0.0049 17.7 0.3 13.1 12 1 0 12 12 12 12 Sperm-tail PG-rich repeat TIR PF01582.20 ORF99841 - 7.8e-05 22.5 0.0 0.00018 21.4 0.0 1.5 1 0 0 1 1 1 1 TIR domain TIR_2 PF13676.6 ORF99841 - 0.064 13.9 0.0 0.14 12.8 0.0 1.5 1 0 0 1 1 1 0 TIR domain COX8 PF02285.15 ORF99841 - 0.096 12.6 0.8 0.39 10.6 0.8 2.1 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII YrhC PF14143.6 ORF99841 - 0.98 9.6 0.0 0.98 9.6 0.0 3.0 4 0 0 4 4 4 0 YrhC-like protein DUF4381 PF14316.6 ORF99841 - 6 7.1 6.4 25 5.1 3.5 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4381) GTP_EFTU PF00009.27 ORF86759 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF86759 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF86759 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF86759 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF86759 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF86759 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF78982 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF78982 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF78982 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF78982 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF78982 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF78982 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF76151 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF76151 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF76151 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF76151 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF76151 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF76151 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF75850 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF75850 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF75850 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF75850 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF75850 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF75850 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Cytochrom_B561 PF03188.16 ORF71013 - 1.5e-10 41.4 3.0 4.5e-10 39.8 3.0 1.8 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 LYRIC PF15686.5 ORF71013 - 0.12 11.9 0.7 4.3 6.8 0.0 2.1 2 0 0 2 2 2 0 Lysine-rich CEACAM1 co-isolated protein family DUF4079 PF13301.6 ORF71013 - 10 6.3 10.9 5.9 7.1 6.7 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF4079) GTP_EFTU PF00009.27 ORF62551 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF62551 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF62551 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF62551 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF62551 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF62551 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 His_Phos_2 PF00328.22 ORF60752 - 0.00046 19.7 0.0 0.011 15.2 0.0 2.1 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 2) TetR_C_31 PF17940.1 ORF60752 - 0.013 15.7 1.7 1.2 9.3 0.2 3.0 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain GTP_EFTU PF00009.27 ORF58649 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF58649 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF58649 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF58649 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF58649 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF58649 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF56010 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF56010 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF56010 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF56010 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF56010 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF56010 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF51109 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF51109 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF51109 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF51109 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF51109 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF51109 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF50591 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF50591 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF50591 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF50591 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF50591 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF50591 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Nucleoporin_FG PF13634.6 ORF42414 - 0.00032 21.5 35.5 0.048 14.5 15.8 4.4 1 1 3 4 4 4 4 Nucleoporin FG repeat region T2SSC PF11356.8 ORF42414 - 1.5 8.7 6.0 1.2 9.0 0.7 2.9 2 1 0 2 2 2 0 Type II secretion system protein C GTP_EFTU PF00009.27 ORF38737 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF38737 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF38737 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF38737 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF38737 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF38737 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GXGXG PF01493.19 ORF36673 - 5.5e-67 225.0 10.7 8.1e-67 224.5 10.7 1.2 1 0 0 1 1 1 1 GXGXG motif Glu_synthase PF01645.17 ORF36673 - 8.5e-20 71.2 0.1 1.2e-19 70.8 0.1 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase HU-HIG PF18291.1 ORF36673 - 0.13 12.4 0.0 0.67 10.1 0.0 2.1 2 0 0 2 2 2 0 HU domain fused to wHTH, Ig, or Glycine-rich motif GTP_EFTU PF00009.27 ORF35964 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF35964 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF35964 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF35964 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF35964 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF35964 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Nucleoside_tran PF01733.18 ORF29287 - 1.7e-54 185.3 16.6 2.5e-54 184.8 16.6 1.2 1 0 0 1 1 1 1 Nucleoside transporter EMC3_TMCO1 PF01956.16 ORF29287 - 4.6 6.9 15.1 0.88 9.3 2.0 2.5 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Nup54 PF13874.6 ORF28823 - 6.7e-14 52.2 9.9 6.2e-13 49.1 7.0 2.4 1 1 1 2 2 2 1 Nucleoporin complex subunit 54 UPF0449 PF15136.6 ORF28823 - 0.2 12.2 12.3 0.61 10.6 1.1 2.8 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 Cas6 PF09559.10 ORF28823 - 0.22 11.5 1.7 0.34 10.9 0.6 1.7 2 0 0 2 2 2 0 Cas6 Crispr SlyX PF04102.12 ORF28823 - 0.32 11.6 8.2 2.5 8.8 0.9 3.5 2 1 2 4 4 4 0 SlyX Sec34 PF04136.15 ORF28823 - 0.43 10.5 12.9 0.095 12.6 2.5 3.0 2 1 1 3 3 3 0 Sec34-like family NPV_P10 PF05531.12 ORF28823 - 1.4 9.5 8.2 2.5 8.6 1.0 3.0 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DHR10 PF18595.1 ORF28823 - 1.5 8.9 9.7 9.1 6.4 2.4 2.6 1 1 0 2 2 2 0 Designed helical repeat protein 10 domain CENP-H PF05837.12 ORF28823 - 4.5 7.7 15.3 7.6 7.0 6.8 2.7 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Cytochrom_C_2 PF01322.20 ORF28823 - 8.3 7.3 9.0 1.5 9.7 4.2 2.3 2 1 1 3 3 3 0 Cytochrome C' DUF3533 PF12051.8 ORF28823 - 8.3 5.2 9.6 0.71 8.7 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3533) SKA2 PF16740.5 ORF28823 - 8.7 6.2 12.3 15 5.4 5.6 3.2 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 GTP_EFTU PF00009.27 ORF21151 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF21151 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF21151 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF21151 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF21151 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF21151 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF20863 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF20863 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF20863 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF20863 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF20863 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF20863 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF108381 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF108381 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF108381 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF108381 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF108381 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF108381 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Nucleoporin_FG PF13634.6 ORF107948 - 0.00032 21.5 35.5 0.048 14.5 15.8 4.4 1 1 3 4 4 4 4 Nucleoporin FG repeat region T2SSC PF11356.8 ORF107948 - 1.5 8.7 6.0 1.2 9.0 0.7 2.9 2 1 0 2 2 2 0 Type II secretion system protein C Aminotran_1_2 PF00155.21 ORF105732 - 8.5e-30 104.1 0.0 1.1e-29 103.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II TIR_2 PF13676.6 ORF104915 - 0.0011 19.5 0.0 0.056 14.1 0.0 2.3 2 0 0 2 2 2 1 TIR domain TIR PF01582.20 ORF104915 - 0.0015 18.3 0.0 0.0024 17.7 0.0 1.2 1 0 0 1 1 1 1 TIR domain DUF4407 PF14362.6 ORF104915 - 0.35 10.2 0.8 1.2 8.5 0.9 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) GTP_EFTU PF00009.27 ORF103262 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF103262 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF103262 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF103262 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF103262 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF103262 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Glyco_hydro_16 PF00722.21 ORF101990 - 2.9e-06 26.9 0.0 1e-05 25.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolases family 16 PAN_4 PF14295.6 ORF101990 - 0.0015 18.4 1.2 0.0015 18.4 1.2 2.2 2 0 0 2 2 2 1 PAN domain GTP_EFTU PF00009.27 ORF10197 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF10197 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF10197 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF10197 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF10197 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF10197 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 RhoGAP PF00620.27 ORF97824 - 3.1 7.6 5.6 2.6 7.8 0.9 2.7 3 0 0 3 3 3 0 RhoGAP domain adh_short PF00106.25 ORF94061 - 1.5e-42 145.3 6.4 2.9e-42 144.3 6.4 1.4 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF94061 - 1.9e-32 112.7 3.0 2.8e-32 112.2 3.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase SCP2 PF02036.17 ORF94061 - 5.3e-18 65.4 0.1 1.2e-17 64.3 0.1 1.5 1 0 0 1 1 1 1 SCP-2 sterol transfer family KR PF08659.10 ORF94061 - 6.1e-17 62.1 1.0 9.6e-17 61.5 1.0 1.3 1 0 0 1 1 1 1 KR domain Alkyl_sulf_C PF14864.6 ORF94061 - 0.00063 20.0 0.0 0.0029 17.9 0.0 2.0 3 0 0 3 3 3 1 Alkyl sulfatase C-terminal DUF3837 PF12939.7 ORF94061 - 0.069 13.6 0.1 2 8.9 0.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) CobN-Mg_chel PF02514.16 ORF94061 - 0.073 10.8 0.0 1.5 6.5 0.0 2.0 2 0 0 2 2 2 0 CobN/Magnesium Chelatase PCI PF01399.27 ORF91189 - 8.4e-17 61.6 3.4 4.4e-16 59.3 1.8 2.8 3 0 0 3 3 3 1 PCI domain CSN8_PSD8_EIF3K PF10075.9 ORF91189 - 0.00019 21.4 0.9 0.00036 20.5 0.9 1.4 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family TPR_7 PF13176.6 ORF91189 - 0.0071 16.3 0.3 0.27 11.4 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF91189 - 0.027 14.7 1.1 0.12 12.7 0.0 2.6 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2225 PF09986.9 ORF91189 - 0.18 11.5 7.9 0.21 11.3 0.4 2.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) SPACA9 PF15120.6 ORF91189 - 0.29 10.9 5.4 0.61 9.9 1.4 3.0 2 1 1 3 3 3 0 Sperm acrosome-associated protein 9 DUF4933 PF16287.5 ORF85625 - 0.045 13.1 0.3 0.077 12.4 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4933) FrhB_FdhB_N PF04422.13 ORF85625 - 0.078 13.1 0.0 0.21 11.7 0.0 1.7 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Peptidase_S49 PF01343.18 ORF85625 - 0.084 12.8 4.1 0.091 12.7 0.6 2.3 2 0 0 2 2 2 0 Peptidase family S49 Tox-REase-3 PF15647.6 ORF85625 - 0.17 12.2 3.8 0.17 12.2 1.3 2.4 2 0 0 2 2 2 0 Restriction endonuclease fold toxin 3 HALZ PF02183.18 ORF85625 - 1.8 8.8 9.3 9.8 6.5 1.0 3.4 3 0 0 3 3 3 0 Homeobox associated leucine zipper Metal_resist PF13801.6 ORF85625 - 4.9 7.4 5.2 9.3 6.5 0.2 2.4 2 0 0 2 2 2 0 Heavy-metal resistance PCI PF01399.27 ORF83225 - 8.4e-17 61.6 3.4 4.4e-16 59.3 1.8 2.8 3 0 0 3 3 3 1 PCI domain CSN8_PSD8_EIF3K PF10075.9 ORF83225 - 0.00019 21.4 0.9 0.00036 20.5 0.9 1.4 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family TPR_7 PF13176.6 ORF83225 - 0.0071 16.3 0.3 0.27 11.4 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF83225 - 0.027 14.7 1.1 0.12 12.7 0.0 2.6 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2225 PF09986.9 ORF83225 - 0.18 11.5 7.9 0.21 11.3 0.4 2.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) SPACA9 PF15120.6 ORF83225 - 0.29 10.9 5.4 0.61 9.9 1.4 3.0 2 1 1 3 3 3 0 Sperm acrosome-associated protein 9 ADIP PF11559.8 ORF76337 - 0.0015 18.7 1.2 0.0015 18.7 1.2 3.3 1 1 2 3 3 2 1 Afadin- and alpha -actinin-Binding Filament PF00038.21 ORF76337 - 0.0018 17.9 27.3 0.12 11.9 14.1 2.2 1 1 1 2 2 2 2 Intermediate filament protein Golgin_A5 PF09787.9 ORF76337 - 0.0074 15.8 25.6 0.018 14.5 25.6 1.6 1 0 0 1 1 1 1 Golgin subfamily A member 5 Seryl_tRNA_N PF02403.22 ORF76337 - 0.017 15.4 5.9 0.017 15.4 5.9 3.9 2 1 0 4 4 3 0 Seryl-tRNA synthetase N-terminal domain zf_UBZ PF18439.1 ORF76337 - 0.031 13.9 1.2 2.1 8.0 0.1 2.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger CENP-F_leu_zip PF10473.9 ORF76337 - 0.054 13.5 31.3 0.37 10.8 2.3 3.3 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 WD40_alt PF14077.6 ORF76337 - 0.064 13.1 0.1 0.49 10.3 0.1 2.4 2 0 0 2 2 2 0 Alternative WD40 repeat motif AIP3 PF03915.13 ORF76337 - 0.076 12.1 15.0 0.16 11.0 15.0 1.5 1 0 0 1 1 1 0 Actin interacting protein 3 DZR PF12773.7 ORF76337 - 0.088 12.8 1.2 0.25 11.4 1.2 1.8 1 1 0 1 1 1 0 Double zinc ribbon Fib_alpha PF08702.10 ORF76337 - 0.14 12.3 14.3 0.44 10.7 0.2 2.5 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Baculo_PEP_C PF04513.12 ORF76337 - 0.19 11.8 15.0 1.2 9.2 2.9 2.2 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus HOOK PF05622.12 ORF76337 - 0.3 9.2 24.9 0.086 11.0 8.6 2.2 1 1 1 2 2 2 0 HOOK protein RPW8 PF05659.11 ORF76337 - 0.45 10.2 6.6 2.4 7.8 0.1 2.9 2 1 1 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 EntA_Immun PF08951.10 ORF76337 - 0.48 10.8 3.9 0.59 10.5 0.9 2.4 3 0 0 3 3 2 0 Enterocin A Immunity FtsX_ECD PF18075.1 ORF76337 - 0.62 10.7 4.1 2 9.1 4.1 1.9 1 0 0 1 1 1 0 FtsX extracellular domain TPR_MLP1_2 PF07926.12 ORF76337 - 0.85 9.7 39.5 2.9 8.0 15.5 3.5 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein YabA PF06156.13 ORF76337 - 1.6 9.4 18.5 0.6 10.8 0.3 3.7 1 1 2 3 3 3 0 Initiation control protein YabA Flagellin_C PF00700.21 ORF76337 - 1.8 8.9 14.3 4 7.9 0.1 4.0 3 2 0 4 4 3 0 Bacterial flagellin C-terminal helical region Goodbye PF17109.5 ORF76337 - 2 8.9 6.0 0.67 10.4 1.7 2.4 1 1 2 3 3 3 0 fungal STAND N-terminal Goodbye domain DUF1664 PF07889.12 ORF76337 - 3 7.9 15.8 2.8 8.0 2.9 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DUF4618 PF15397.6 ORF76337 - 3.1 7.1 19.9 62 2.9 19.9 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) TMF_TATA_bd PF12325.8 ORF76337 - 4 7.7 29.1 2 8.7 12.1 3.5 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding TAF8_C PF10406.9 ORF76337 - 5.3 7.7 9.8 17 6.0 1.1 3.5 2 0 0 2 2 2 0 Transcription factor TFIID complex subunit 8 C-term KASH_CCD PF14662.6 ORF76337 - 5.9 6.7 31.0 0.73 9.6 2.9 2.4 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH CCDC92 PF14916.6 ORF76337 - 6.1 6.7 8.0 24 4.8 0.0 3.8 4 0 0 4 4 4 0 Coiled-coil domain of unknown function Tup_N PF08581.10 ORF76337 - 6.7 7.1 15.3 5.7 7.3 0.2 3.5 2 1 1 3 3 3 0 Tup N-terminal T3SS_TC PF06511.11 ORF76337 - 7.1 5.9 21.9 4.3 6.6 9.5 2.2 1 1 1 2 2 2 0 Type III secretion systems tip complex components Pkinase PF00069.25 ORF74752 - 6.6e-66 222.4 0.0 8.6e-66 222.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF74752 - 2.3e-29 102.5 0.0 3.4e-29 101.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF74752 - 4.2e-05 23.0 0.0 0.0001 21.8 0.0 1.7 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF74752 - 6.9e-05 22.3 0.0 0.0001 21.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF74752 - 0.039 13.5 0.2 0.15 11.6 0.1 1.9 2 0 0 2 2 2 0 Choline/ethanolamine kinase APH PF01636.23 ORF74752 - 0.079 12.9 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF74752 - 0.08 11.7 0.0 0.14 10.9 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase Fungal_KA1 PF16797.5 ORF74752 - 0.16 11.7 0.1 0.41 10.3 0.1 1.7 1 0 0 1 1 1 0 Fungal kinase associated-1 domain TPR_2 PF07719.17 ORF74559 - 6.1e-12 44.7 29.8 7.1e-05 22.6 2.6 8.0 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF74559 - 5.4e-10 39.6 8.0 0.0013 19.2 0.1 4.8 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF74559 - 4.2e-07 29.5 31.9 0.0049 16.6 3.5 7.2 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_6 PF13174.6 ORF74559 - 4.1e-06 27.1 22.6 0.00013 22.3 1.3 6.5 8 0 0 8 8 7 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF74559 - 5.4e-06 26.2 25.0 0.012 15.8 1.9 7.0 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF74559 - 0.0001 22.5 15.6 0.17 12.2 0.1 6.7 7 1 1 8 8 7 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF74559 - 0.00016 21.8 27.1 0.00081 19.6 1.9 5.0 3 2 2 6 6 6 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF74559 - 0.00052 20.6 5.1 0.1 13.2 0.1 4.9 5 1 1 6 6 6 1 Tetratricopeptide repeat Wzy_C_2 PF11846.8 ORF74559 - 0.014 15.3 0.7 0.025 14.5 0.1 1.7 2 0 0 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal TPR_7 PF13176.6 ORF74559 - 0.015 15.3 9.8 0.33 11.1 1.0 5.2 5 0 0 5 5 5 0 Tetratricopeptide repeat Sec16_C PF12931.7 ORF74559 - 0.032 13.9 1.3 0.075 12.7 1.3 1.7 1 0 0 1 1 1 0 Sec23-binding domain of Sec16 DUF1948 PF09185.10 ORF74559 - 0.048 13.5 1.5 0.058 13.3 0.3 1.8 2 0 0 2 2 1 0 Domain of unknown function (DUF1948) YfiO PF13525.6 ORF74559 - 0.063 13.0 15.4 0.41 10.4 4.1 4.3 3 2 0 3 3 3 0 Outer membrane lipoprotein TPR_11 PF13414.6 ORF74559 - 0.15 11.7 19.9 0.62 9.8 0.5 5.2 4 1 1 5 5 5 0 TPR repeat TPR_21 PF09976.9 ORF74559 - 0.45 10.2 12.4 0.078 12.7 1.8 3.4 3 1 1 4 4 4 0 Tetratricopeptide repeat-like domain Fis1_TPR_C PF14853.6 ORF74559 - 2.2 8.4 19.9 3.9 7.6 0.2 5.5 5 1 1 6 6 6 0 Fis1 C-terminal tetratricopeptide repeat NIT PF08376.10 ORF66576 - 3.8e-07 30.8 0.0 9.7e-07 29.5 0.0 1.6 1 1 0 1 1 1 1 Nitrate and nitrite sensing GatB_Yqey PF02637.18 ORF66576 - 0.061 13.2 0.0 3.5 7.5 0.0 2.5 2 0 0 2 2 2 0 GatB domain Vps39_2 PF10367.9 ORF57987 - 3.8e-20 72.4 0.4 1.2e-19 70.7 0.3 2.0 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 Clathrin PF00637.20 ORF57987 - 0.018 14.9 0.0 0.044 13.6 0.0 1.6 1 1 0 1 1 1 0 Region in Clathrin and VPS CN_hydrolase PF00795.22 ORF53511 - 5.2e-17 62.1 0.5 3.3e-12 46.3 0.1 2.1 2 0 0 2 2 2 2 Carbon-nitrogen hydrolase MAP17 PF15807.5 ORF52962 - 0.00012 22.3 0.0 0.00022 21.5 0.0 1.3 1 0 0 1 1 1 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 LRR19-TM PF15176.6 ORF52962 - 0.00054 19.9 0.0 0.0013 18.7 0.0 1.7 1 0 0 1 1 1 1 Leucine-rich repeat family 19 TM domain EVC2_like PF12297.8 ORF52962 - 0.029 13.1 0.1 0.13 10.9 0.0 1.9 2 0 0 2 2 2 0 Ellis van Creveld protein 2 like protein DUF4834 PF16118.5 ORF52962 - 0.033 15.2 0.0 0.097 13.7 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) fn3_3 PF14686.6 ORF52962 - 0.04 13.7 0.8 0.13 12.1 0.3 2.2 2 0 0 2 2 2 0 Polysaccharide lyase family 4, domain II Shisa PF13908.6 ORF52962 - 0.06 13.6 1.6 0.087 13.1 0.2 2.0 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator DUF4006 PF13179.6 ORF52962 - 0.068 13.1 0.2 1.1 9.3 0.0 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF4006) LPAM_1 PF08139.12 ORF49057 - 0.28 11.7 1.0 0.44 11.1 1.0 1.3 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Sec20 PF03908.13 ORF48050 - 7.8 6.5 7.1 3.4 7.7 0.9 3.2 3 0 0 3 3 3 0 Sec20 RhoGAP PF00620.27 ORF42862 - 3.1 7.6 5.6 2.6 7.8 0.9 2.7 3 0 0 3 3 3 0 RhoGAP domain Isochorismatase PF00857.20 ORF33449 - 5.9e-32 111.2 0.0 9.4e-32 110.6 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family GATase PF00117.28 ORF33449 - 6e-08 32.7 0.0 1.1e-07 31.9 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF33449 - 0.01 15.6 0.1 0.023 14.5 0.1 1.7 1 1 0 1 1 1 0 Peptidase C26 His_Phos_2 PF00328.22 ORF27794 - 2.3e-15 56.8 2.3 5.2e-12 45.8 0.7 3.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) DUF866 PF05907.13 ORF27794 - 0.027 14.4 0.4 0.042 13.8 0.4 1.3 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF866) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks21.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks21.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks21.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks21.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Zn_peptidase PF04228.13 NODE_54584_length_319_cov_77.109155_g46653_i0reverse_frame_1 - 0.23 10.9 0.0 0.29 10.5 0.0 1.1 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase Sterol-sensing PF12349.8 NODE_54581_length_319_cov_83.253521_g46650_i0forward_frame_1 - 0.65 9.8 4.6 4.3 7.1 0.3 2.1 1 1 1 2 2 2 0 Sterol-sensing domain of SREBP cleavage-activation Stimulus_sens_1 PF13756.6 NODE_54578_length_319_cov_92.186620_g46647_i0forward_frame_1 - 0.0027 18.3 0.0 0.0036 17.9 0.0 1.2 1 0 0 1 1 1 1 Stimulus-sensing domain ETRAMP PF09716.10 NODE_54578_length_319_cov_92.186620_g46647_i0forward_frame_1 - 0.0052 16.8 2.9 0.0066 16.5 2.9 1.2 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Transglut_C PF00927.22 NODE_54572_length_319_cov_133.742958_g46641_i0forward_frame_1 - 0.024 14.8 0.0 0.031 14.4 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase family, C-terminal ig like domain Ndc1_Nup PF09531.10 NODE_54571_length_319_cov_135.975352_g46640_i0forward_frame_1 - 0.52 8.9 5.4 0.58 8.8 5.4 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup EpmC PF04315.12 NODE_54563_length_319_cov_204.926056_g46632_i0reverse_frame_1 - 0.074 12.7 0.0 0.086 12.5 0.0 1.1 1 0 0 1 1 1 0 Elongation factor P hydroxylase FNIP PF05725.12 NODE_54554_length_319_cov_592.267606_g46623_i0forward_frame_1 - 1.6e-20 73.0 11.3 2.2e-11 43.7 1.7 2.2 1 1 1 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_54554_length_319_cov_592.267606_g46623_i0forward_frame_1 - 0.012 15.5 0.6 0.022 14.7 0.6 1.6 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) TIMELESS_C PF05029.13 NODE_54549_length_320_cov_1.400000_g46618_i0reverse_frame_1 - 0.015 14.5 0.0 0.015 14.5 0.0 1.1 1 0 0 1 1 1 0 Timeless protein C terminal region DUF1635 PF07795.11 NODE_54549_length_320_cov_1.400000_g46618_i0reverse_frame_1 - 0.21 11.4 1.7 0.78 9.6 1.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1635) UPF0259 PF06790.11 NODE_54549_length_320_cov_1.400000_g46618_i0forward_frame_1 - 9.8e-19 68.1 5.0 1.3e-18 67.7 5.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0259) MASE4 PF17158.4 NODE_54547_length_320_cov_1.501754_g46616_i0reverse_frame_1 - 1.2e-21 77.1 13.8 1.4e-21 76.9 13.8 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain DUF2070 PF09843.9 NODE_54547_length_320_cov_1.501754_g46616_i0reverse_frame_1 - 0.55 8.5 7.6 0.57 8.4 7.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF1804 PF08822.11 NODE_54535_length_320_cov_1.884211_g46604_i0forward_frame_1 - 0.046 13.7 0.0 0.061 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) LRR_9 PF14580.6 NODE_54534_length_320_cov_1.926316_g46603_i0forward_frame_1 - 1.3e-06 28.0 1.0 2.4e-06 27.2 1.0 1.3 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 NODE_54534_length_320_cov_1.926316_g46603_i0forward_frame_1 - 0.00011 22.5 10.1 0.0013 19.1 8.3 2.3 1 1 0 2 2 2 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_54534_length_320_cov_1.926316_g46603_i0forward_frame_1 - 0.0079 15.9 5.9 0.099 12.4 5.3 2.5 2 1 0 2 2 2 1 Leucine rich repeat LRR_1 PF00560.33 NODE_54534_length_320_cov_1.926316_g46603_i0forward_frame_1 - 2.8 8.8 9.4 18 6.3 1.9 3.5 2 2 1 3 3 3 0 Leucine Rich Repeat Poxvirus_B22R PF04395.12 NODE_54531_length_320_cov_2.049123_g46600_i0forward_frame_1 - 0.094 12.2 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Poxvirus B22R protein TAFII28 PF04719.14 NODE_54525_length_320_cov_2.470175_g46594_i0forward_frame_1 - 0.18 11.9 0.0 0.31 11.2 0.0 1.4 1 0 0 1 1 1 0 hTAFII28-like protein conserved region DUF5082 PF16888.5 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.0096 16.2 3.1 0.052 13.8 3.2 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF5082) OmpH PF03938.14 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.014 15.7 2.4 0.019 15.3 2.4 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) RapA_C PF12137.8 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.018 14.1 0.4 0.018 14.1 0.4 1.1 1 0 0 1 1 1 0 RNA polymerase recycling family C-terminal Snapin_Pallidin PF14712.6 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.024 15.1 3.0 0.039 14.4 3.0 1.4 1 1 0 1 1 1 0 Snapin/Pallidin FBP_C PF16571.5 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.038 13.5 0.5 0.048 13.2 0.5 1.1 1 0 0 1 1 1 0 FBP C-terminal treble-clef zinc-finger Phage_holin_7_1 PF16081.5 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.13 12.4 0.1 0.14 12.4 0.1 1.2 1 0 0 1 1 1 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family DUF5383 PF17355.2 NODE_54519_length_320_cov_2.771930_g46588_i0forward_frame_1 - 2.8 8.3 7.4 28 5.1 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5383) Orf78 PF06024.12 NODE_54519_length_320_cov_2.771930_g46588_i0forward_frame_1 - 9.1 6.6 8.4 0.45 10.8 3.3 1.5 2 0 0 2 2 2 0 Orf78 (ac78) Rhomboid PF01694.22 NODE_54514_length_320_cov_3.182456_g46583_i0forward_frame_1 - 3.3e-09 36.9 1.9 3.3e-09 36.9 1.9 1.9 2 0 0 2 2 2 1 Rhomboid family Plant_NMP1 PF06694.11 NODE_54512_length_320_cov_3.259649_g46581_i0forward_frame_1 - 0.076 12.1 0.5 0.08 12.0 0.5 1.0 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) DUF4501 PF14946.6 NODE_54487_length_320_cov_68.242105_g46556_i0forward_frame_1 - 0.17 11.9 0.8 0.21 11.7 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) NnrS PF05940.12 NODE_54478_length_320_cov_76.543860_g46547_i0reverse_frame_1 - 0.25 10.7 0.0 0.3 10.4 0.0 1.1 1 0 0 1 1 1 0 NnrS protein TK PF00265.18 NODE_54476_length_320_cov_88.680702_g46545_i0reverse_frame_1 - 0.018 14.9 0.4 0.019 14.8 0.4 1.1 1 0 0 1 1 1 0 Thymidine kinase DPPIV_rep PF18811.1 NODE_54470_length_320_cov_113.957895_g46539_i0reverse_frame_1 - 0.13 12.3 0.2 0.22 11.5 0.2 1.4 1 0 0 1 1 1 0 Dipeptidyl peptidase IV (DPP IV) low complexity region Zn_Tnp_IS1 PF03811.13 NODE_54469_length_320_cov_114.084211_g46538_i0forward_frame_1 - 0.031 14.0 0.5 0.1 12.3 0.1 2.1 2 0 0 2 2 2 0 InsA N-terminal domain DUF3114 PF11311.8 NODE_54460_length_320_cov_168.049123_g46529_i0reverse_frame_1 - 0.18 11.3 0.7 0.3 10.6 0.6 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3114) Glucosamine_iso PF01182.20 NODE_54451_length_320_cov_614.424561_g46520_i0reverse_frame_1 - 0.061 13.2 0.0 0.068 13.0 0.0 1.1 1 0 0 1 1 1 0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M-inducer_phosp PF06617.13 NODE_54451_length_320_cov_614.424561_g46520_i0forward_frame_1 - 0.0047 16.2 0.4 0.0052 16.1 0.4 1.0 1 0 0 1 1 1 1 M-phase inducer phosphatase HELP PF03451.14 NODE_54449_length_321_cov_1.115385_g46518_i0forward_frame_1 - 0.00092 19.0 0.0 0.0011 18.8 0.0 1.2 1 0 0 1 1 1 1 HELP motif DUF2207 PF09972.9 NODE_54443_length_321_cov_1.678322_g46512_i0forward_frame_1 - 5.1 5.7 5.2 1 8.0 1.9 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3385 PF11865.8 NODE_54433_length_321_cov_2.104895_g46502_i0forward_frame_1 - 0.084 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) LysR_substrate PF03466.20 NODE_54424_length_321_cov_2.395105_g46493_i0forward_frame_1 - 2e-09 37.2 0.1 2.8e-09 36.7 0.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 NODE_54424_length_321_cov_2.395105_g46493_i0forward_frame_1 - 9.9e-05 22.2 0.1 0.00022 21.1 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family TilS_C PF11734.8 NODE_54423_length_321_cov_2.479021_g46492_i0forward_frame_1 - 0.073 12.5 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 TilS substrate C-terminal domain MORN PF02493.20 NODE_54422_length_321_cov_2.486014_g46491_i0reverse_frame_1 - 0.0087 15.9 0.2 0.016 15.1 0.2 1.4 1 0 0 1 1 1 1 MORN repeat Phi_1 PF04674.12 NODE_54415_length_321_cov_3.097902_g46484_i0reverse_frame_1 - 0.069 12.5 0.1 0.078 12.3 0.1 1.0 1 0 0 1 1 1 0 Phosphate-induced protein 1 conserved region Thioredoxin PF00085.20 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 5.7e-32 109.8 0.0 6.2e-32 109.7 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 6e-07 29.9 0.0 5.2e-06 26.9 0.0 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 1.4e-06 28.5 0.0 0.00011 22.4 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_9 PF14595.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.00016 21.5 0.0 0.00017 21.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin TraF PF13728.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.00033 20.5 0.0 0.00039 20.3 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein OST3_OST6 PF04756.13 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.0032 16.9 0.0 0.0039 16.6 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_7 PF13899.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.0061 16.7 0.0 0.0099 16.0 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.21 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.0099 15.8 0.0 0.012 15.5 0.0 1.3 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.013 15.2 0.0 0.029 14.1 0.0 1.5 1 1 1 2 2 2 0 Redoxin Thioredoxin_3 PF13192.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.015 15.4 0.0 0.018 15.1 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin domain HyaE PF07449.11 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.15 12.0 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Sgf11_N PF18519.1 NODE_54409_length_321_cov_4.622378_g46478_i0forward_frame_1 - 0.088 12.4 0.2 0.2 11.3 0.2 1.6 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain MRVI1 PF05781.12 NODE_54408_length_321_cov_4.748252_g46477_i0reverse_frame_1 - 0.1 11.3 0.7 0.12 11.0 0.7 1.0 1 0 0 1 1 1 0 MRVI1 protein CcdA PF07362.12 NODE_54397_length_321_cov_43.853147_g46466_i0reverse_frame_1 - 0.037 14.4 0.6 0.072 13.5 0.6 1.5 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA Sigma70_r1_2 PF00140.20 NODE_54388_length_321_cov_71.472028_g46457_i0forward_frame_1 - 0.065 13.3 0.0 2.2 8.4 0.0 2.2 2 0 0 2 2 2 0 Sigma-70 factor, region 1.2 TAT_signal PF10518.9 NODE_54377_length_321_cov_104.779720_g46446_i0reverse_frame_1 - 0.34 10.8 1.6 0.38 10.7 0.1 1.9 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence RAP PF08373.10 NODE_54374_length_321_cov_126.793706_g46443_i0reverse_frame_1 - 8.7e-06 25.7 0.0 1.2e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 NODE_54374_length_321_cov_126.793706_g46443_i0reverse_frame_1 - 0.01 16.0 0.0 0.015 15.5 0.0 1.3 1 0 0 1 1 1 0 REase_MTES_1575 DUF3482 PF11981.8 NODE_54361_length_321_cov_19379.020979_g46430_i0forward_frame_1 - 0.0079 15.6 5.6 0.009 15.4 5.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) ETRAMP PF09716.10 NODE_54361_length_321_cov_19379.020979_g46430_i0forward_frame_1 - 0.15 12.1 1.0 0.19 11.8 1.0 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) NPM1-C PF16276.5 NODE_54359_length_322_cov_0.930314_g46428_i0reverse_frame_2 - 0.049 13.6 0.7 2.5 8.2 0.0 2.8 2 1 1 3 3 3 0 Nucleophosmin C-terminal domain CENP-B_dimeris PF09026.10 NODE_54357_length_322_cov_1.069686_g46426_i0reverse_frame_3 - 0.26 11.7 8.4 0.38 11.2 8.4 1.3 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DNA_pol_phi PF04931.13 NODE_54357_length_322_cov_1.069686_g46426_i0reverse_frame_3 - 3.5 5.6 7.2 3.7 5.5 7.2 1.1 1 0 0 1 1 1 0 DNA polymerase phi Cwf_Cwc_15 PF04889.12 NODE_54357_length_322_cov_1.069686_g46426_i0reverse_frame_3 - 5.1 6.8 9.8 5.7 6.6 9.8 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein SelP_N PF04592.14 NODE_54357_length_322_cov_1.069686_g46426_i0forward_frame_2 - 1.3 8.3 23.1 1.8 7.9 23.1 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Zip PF02535.22 NODE_54357_length_322_cov_1.069686_g46426_i0forward_frame_2 - 1.5 8.0 7.4 1.6 7.8 7.4 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Flu_C_NS1 PF03506.13 NODE_54355_length_322_cov_1.254355_g46424_i0reverse_frame_2 - 0.021 14.8 0.4 0.023 14.7 0.4 1.0 1 0 0 1 1 1 0 Influenza C non-structural protein (NS1) DUF812 PF05667.11 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.0038 16.2 6.7 0.0044 16.0 6.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Leu_zip PF15294.6 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.0043 16.6 6.8 0.0053 16.3 6.8 1.0 1 0 0 1 1 1 1 Leucine zipper TMF_TATA_bd PF12325.8 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.0053 17.0 6.9 0.0069 16.6 6.9 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding IL31 PF15209.6 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.0067 16.2 0.2 0.011 15.5 0.2 1.3 1 0 0 1 1 1 1 Interleukin 31 GAS PF13851.6 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.0072 15.7 7.3 0.0078 15.6 7.3 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding TMPIT PF07851.13 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.13 11.4 5.8 0.14 11.3 5.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein TMF_DNA_bd PF12329.8 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.16 12.0 8.8 0.26 11.3 8.8 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding FapA PF03961.13 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.21 10.2 5.5 0.25 9.9 5.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Tho2 PF11262.8 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.79 8.9 7.2 0.77 8.9 7.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DivIC PF04977.15 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.82 9.5 10.1 0.37 10.6 2.9 2.1 1 1 1 2 2 2 0 Septum formation initiator ZapB PF06005.12 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 1.4 9.4 11.8 5.2 7.6 10.8 2.0 1 1 1 2 2 2 0 Cell division protein ZapB MscS_TM PF12794.7 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 2.3 7.0 3.5 3.1 6.6 3.5 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF4337 PF14235.6 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 3.4 7.8 6.2 4.1 7.5 6.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) PRD PF00874.20 NODE_54348_length_322_cov_1.574913_g46417_i0forward_frame_2 - 0.027 14.8 0.5 0.044 14.1 0.5 1.4 1 0 0 1 1 1 0 PRD domain DUF2701 PF10857.8 NODE_54348_length_322_cov_1.574913_g46417_i0forward_frame_2 - 0.056 13.5 0.2 0.098 12.7 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) SecIII_SopE_N PF05364.14 NODE_54343_length_322_cov_1.714286_g46412_i0reverse_frame_2 - 0.015 15.3 0.1 0.023 14.7 0.1 1.3 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Pcc1 PF09341.10 NODE_54342_length_322_cov_1.756098_g46411_i0reverse_frame_2 - 0.18 12.0 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Transcription factor Pcc1 RVT_1 PF00078.27 NODE_54341_length_322_cov_1.777003_g46410_i0reverse_frame_3 - 0.00049 19.7 0.0 0.00059 19.4 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) HCV_NS5a_1a PF08300.13 NODE_54338_length_322_cov_1.888502_g46407_i0reverse_frame_2 - 0.004 17.3 4.9 0.0064 16.6 4.9 1.3 1 0 0 1 1 1 1 Hepatitis C virus non-structural 5a zinc finger domain LRR_8 PF13855.6 NODE_54336_length_322_cov_1.923345_g46405_i0forward_frame_2 - 0.081 12.7 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Leucine rich repeat REJ PF02010.15 NODE_54335_length_322_cov_1.951220_g46404_i0reverse_frame_3 - 0.014 14.2 0.6 0.016 14.1 0.6 1.0 1 0 0 1 1 1 0 REJ domain Pox_A9 PF04835.12 NODE_54328_length_322_cov_2.128920_g46397_i0reverse_frame_3 - 0.091 12.9 2.5 0.16 12.2 2.5 1.4 1 0 0 1 1 1 0 A9 protein conserved region Ion_trans PF00520.31 NODE_54327_length_322_cov_2.226481_g46396_i0forward_frame_2 - 0.0016 17.7 1.1 0.0018 17.5 1.1 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 NODE_54327_length_322_cov_2.226481_g46396_i0forward_frame_2 - 0.12 12.4 8.0 0.3 11.1 6.9 2.1 1 1 1 2 2 2 0 Ion channel Ldt_C PF17969.1 NODE_54326_length_322_cov_2.250871_g46395_i0forward_frame_2 - 1e-26 93.4 0.4 4.7e-26 91.3 0.0 1.9 2 0 0 2 2 2 1 L,D-transpeptidase C-terminal domain Transglut_core2 PF13369.6 NODE_54326_length_322_cov_2.250871_g46395_i0forward_frame_2 - 0.12 12.0 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Transglutaminase-like superfamily TrkA_N PF02254.18 NODE_54324_length_322_cov_2.271777_g46393_i0forward_frame_2 - 7.6e-11 42.3 0.0 8.9e-11 42.1 0.0 1.1 1 0 0 1 1 1 1 TrkA-N domain Peptidase_A2E PF12382.8 NODE_54323_length_322_cov_2.327526_g46392_i0reverse_frame_2 - 0.05 13.6 0.4 0.08 13.0 0.4 1.3 1 1 0 1 1 1 0 Retrotransposon peptidase Flu_NS1 PF00600.19 NODE_54323_length_322_cov_2.327526_g46392_i0forward_frame_2 - 0.096 12.2 0.2 0.11 12.0 0.2 1.1 1 0 0 1 1 1 0 Influenza non-structural protein (NS1) TT_ORF1 PF02956.14 NODE_54322_length_322_cov_2.337979_g46391_i0reverse_frame_2 - 2.7 6.6 15.7 2.7 6.6 15.7 1.0 1 0 0 1 1 1 0 TT viral orf 1 DUF3553 PF12073.8 NODE_54317_length_322_cov_2.543554_g46386_i0reverse_frame_3 - 0.19 11.5 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3553) HATPase_c PF02518.26 NODE_54317_length_322_cov_2.543554_g46386_i0reverse_frame_2 - 0.0013 19.2 0.0 0.0019 18.7 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arylsulfotran_2 PF14269.6 NODE_54317_length_322_cov_2.543554_g46386_i0forward_frame_2 - 0.085 12.2 0.0 0.091 12.1 0.0 1.1 1 0 0 1 1 1 0 Arylsulfotransferase (ASST) COX14 PF14880.6 NODE_54316_length_322_cov_2.557491_g46385_i0reverse_frame_3 - 0.15 11.9 0.1 0.22 11.4 0.1 1.2 1 0 0 1 1 1 0 Cytochrome oxidase c assembly DUF2867 PF11066.8 NODE_54316_length_322_cov_2.557491_g46385_i0reverse_frame_2 - 0.019 15.3 0.2 0.026 14.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2867) DUF1727 PF08353.10 NODE_54316_length_322_cov_2.557491_g46385_i0forward_frame_3 - 0.088 12.7 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1727) Peptidase_U57 PF05582.12 NODE_54314_length_322_cov_2.585366_g46383_i0forward_frame_3 - 0.025 13.8 0.2 0.026 13.8 0.2 1.1 1 0 0 1 1 1 0 YabG peptidase U57 RPAP3_C PF13877.6 NODE_54314_length_322_cov_2.585366_g46383_i0forward_frame_3 - 0.06 13.9 0.1 0.082 13.5 0.1 1.3 1 0 0 1 1 1 0 Potential Monad-binding region of RPAP3 NDK PF00334.19 NODE_54314_length_322_cov_2.585366_g46383_i0forward_frame_3 - 0.12 12.3 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Nucleoside diphosphate kinase MyTH4 PF00784.17 NODE_54312_length_322_cov_2.714286_g46381_i0reverse_frame_2 - 0.23 12.0 1.9 5.4 7.5 0.4 2.1 2 0 0 2 2 2 0 MyTH4 domain RCC1_2 PF13540.6 NODE_54312_length_322_cov_2.714286_g46381_i0forward_frame_2 - 5.4e-05 22.9 0.0 0.025 14.4 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_54312_length_322_cov_2.714286_g46381_i0forward_frame_2 - 0.15 12.2 0.1 7.8 6.6 0.0 2.0 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 YabA PF06156.13 NODE_54307_length_322_cov_3.062718_g46376_i0forward_frame_2 - 0.61 10.8 5.8 1.5 9.5 5.8 1.6 1 1 0 1 1 1 0 Initiation control protein YabA Spc7 PF08317.11 NODE_54307_length_322_cov_3.062718_g46376_i0forward_frame_2 - 3.1 6.6 12.5 3.8 6.3 12.5 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF5329 PF17263.2 NODE_54304_length_322_cov_3.184669_g46373_i0forward_frame_3 - 4.3e-32 110.2 0.0 4.8e-32 110.0 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5329) MtrH PF02007.18 NODE_54304_length_322_cov_3.184669_g46373_i0forward_frame_3 - 0.04 13.0 0.0 0.064 12.3 0.0 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase MtrH subunit YabA PF06156.13 NODE_54294_length_322_cov_37.034843_g46363_i0forward_frame_3 - 0.85 10.3 16.1 1.5 9.5 11.3 2.0 1 1 1 2 2 2 0 Initiation control protein YabA Gram_pos_anchor PF00746.21 NODE_54292_length_322_cov_64.968641_g46361_i0reverse_frame_2 - 0.6 10.1 4.8 2.8 8.0 0.4 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif CdvA PF18822.1 NODE_54291_length_322_cov_65.473868_g46360_i0forward_frame_2 - 0.024 14.5 2.0 0.19 11.6 2.0 2.0 1 1 0 1 1 1 0 CdvA-like coiled-coil domain DUF2730 PF10805.8 NODE_54291_length_322_cov_65.473868_g46360_i0forward_frame_2 - 0.064 13.4 0.2 0.083 13.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) DUF5090 PF17009.5 NODE_54288_length_322_cov_68.243902_g46357_i0reverse_frame_2 - 3.4 7.6 6.9 4.1 7.3 6.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) UCH PF00443.29 NODE_54288_length_322_cov_68.243902_g46357_i0forward_frame_2 - 0.0011 18.5 0.9 0.0013 18.3 0.0 1.5 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase ATP-gua_PtransN PF02807.15 NODE_54288_length_322_cov_68.243902_g46357_i0forward_frame_2 - 0.071 13.5 0.0 0.082 13.3 0.0 1.3 1 0 0 1 1 1 0 ATP:guanido phosphotransferase, N-terminal domain Post_transc_reg PF13797.6 NODE_54286_length_322_cov_72.080139_g46355_i0forward_frame_2 - 0.074 12.9 0.6 0.14 12.1 0.6 1.5 1 1 0 1 1 1 0 Post-transcriptional regulator IBN_N PF03810.19 NODE_54285_length_322_cov_74.459930_g46354_i0reverse_frame_3 - 7.2e-07 29.0 0.2 1.1e-06 28.5 0.2 1.3 1 0 0 1 1 1 1 Importin-beta N-terminal domain E_Pc_C PF06752.12 NODE_54278_length_322_cov_85.644599_g46347_i0forward_frame_3 - 0.044 13.9 1.1 0.05 13.7 1.1 1.0 1 0 0 1 1 1 0 Enhancer of Polycomb C-terminus DUF3394 PF11874.8 NODE_54276_length_322_cov_87.038328_g46345_i0reverse_frame_2 - 0.038 13.7 0.0 0.042 13.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3394) DcuC PF03606.15 NODE_54272_length_322_cov_100.069686_g46341_i0forward_frame_3 - 0.21 10.0 0.1 0.26 9.7 0.1 1.1 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier CortBP2 PF09727.9 NODE_54270_length_322_cov_120.289199_g46339_i0reverse_frame_2 - 0.0052 16.7 3.8 0.0062 16.5 3.8 1.1 1 0 0 1 1 1 1 Cortactin-binding protein-2 Golgin_A5 PF09787.9 NODE_54270_length_322_cov_120.289199_g46339_i0reverse_frame_2 - 0.22 10.9 7.3 0.27 10.6 7.3 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF5463 PF17551.2 NODE_54269_length_322_cov_120.637631_g46338_i0forward_frame_3 - 1 9.3 7.3 4.1 7.4 0.3 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5463) GATA PF00320.27 NODE_54265_length_322_cov_141.233449_g46334_i0reverse_frame_2 - 0.27 10.9 0.4 0.27 10.9 0.4 1.8 2 0 0 2 2 2 0 GATA zinc finger PDR_CDR PF06422.12 NODE_54265_length_322_cov_141.233449_g46334_i0forward_frame_2 - 0.17 11.8 0.7 0.23 11.4 0.7 1.2 1 0 0 1 1 1 0 CDR ABC transporter FAM153 PF15722.5 NODE_54260_length_322_cov_189.954704_g46329_i0forward_frame_2 - 0.021 15.2 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 FAM153 family ABC2_membrane_2 PF12679.7 NODE_54257_length_322_cov_209.982578_g46326_i0reverse_frame_2 - 0.1 11.8 0.5 0.12 11.6 0.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein EF-hand_1 PF00036.32 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 5.1e-06 25.7 2.8 0.017 14.6 1.1 2.4 1 1 2 3 3 3 2 EF hand EF-hand_7 PF13499.6 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.00011 22.6 3.4 0.0006 20.2 3.5 1.8 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.0005 20.4 0.6 0.0006 20.1 0.6 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_6 PF13405.6 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.0013 18.5 4.7 0.022 14.7 1.9 2.5 1 1 2 3 3 3 1 EF-hand domain Yop-YscD_ppl PF16693.5 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.031 13.7 0.4 0.035 13.5 0.4 1.1 1 0 0 1 1 1 0 Inner membrane component of T3SS, periplasmic domain DUF648 PF04890.13 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.033 14.0 0.4 0.038 13.8 0.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF648) EF-hand_5 PF13202.6 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 7 6.3 9.5 2 8.1 2.0 3.2 1 1 3 4 4 4 0 EF hand DUF3302 PF11742.8 NODE_54253_length_322_cov_278.080139_g46322_i0forward_frame_3 - 0.0091 16.1 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3302) ubiquitin PF00240.23 NODE_54251_length_322_cov_321.177700_g46320_i0reverse_frame_2 - 2.8e-19 68.6 0.0 4.3e-19 68.0 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_54251_length_322_cov_321.177700_g46320_i0reverse_frame_2 - 1.9e-08 34.0 0.0 3.4e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_54251_length_322_cov_321.177700_g46320_i0reverse_frame_2 - 0.00069 20.0 0.0 0.0047 17.4 0.0 2.1 1 1 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 NODE_54251_length_322_cov_321.177700_g46320_i0reverse_frame_2 - 0.0077 16.3 0.3 0.019 15.1 0.0 1.9 2 1 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like DUF309 PF03745.14 NODE_54249_length_322_cov_367.515679_g46318_i0reverse_frame_2 - 0.0056 16.3 0.3 0.027 14.2 0.1 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF309) LacY_symp PF01306.19 NODE_54245_length_322_cov_1560.543554_g46314_i0forward_frame_2 - 0.49 9.1 2.8 0.61 8.8 2.8 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter Glycolytic PF00274.19 NODE_54242_length_322_cov_4357.714286_g46311_i0reverse_frame_2 - 2e-05 23.5 0.2 2.6e-05 23.1 0.2 1.2 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I TTL PF03133.15 NODE_54237_length_323_cov_1.284722_g46306_i0forward_frame_3 - 1.1e-17 64.1 0.1 1.3e-17 63.9 0.1 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_54237_length_323_cov_1.284722_g46306_i0forward_frame_3 - 0.00076 18.8 0.0 0.00083 18.7 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_54237_length_323_cov_1.284722_g46306_i0forward_frame_3 - 0.007 15.7 0.0 0.0095 15.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp SH PF01445.17 NODE_54235_length_323_cov_1.496528_g46304_i0forward_frame_3 - 0.098 12.6 1.4 0.24 11.4 1.4 1.7 1 0 0 1 1 1 0 Viral small hydrophobic protein DUF3053 PF11254.8 NODE_54228_length_323_cov_1.680556_g46297_i0reverse_frame_2 - 0.034 13.7 0.3 0.051 13.1 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3053) MSSP PF03940.13 NODE_54227_length_323_cov_1.708333_g46296_i0forward_frame_2 - 0.011 15.3 12.0 0.031 13.9 12.0 1.7 1 1 0 1 1 1 0 Male specific sperm protein SHP PF03579.13 NODE_54220_length_323_cov_2.048611_g46289_i0reverse_frame_3 - 0.017 15.1 0.3 0.037 14.0 0.3 1.5 1 0 0 1 1 1 0 Small hydrophobic protein Ferric_reduct PF01794.19 NODE_54217_length_323_cov_2.076389_g46286_i0forward_frame_2 - 0.0017 18.5 0.6 0.0018 18.4 0.6 1.2 1 0 0 1 1 1 1 Ferric reductase like transmembrane component NADase_NGA PF07461.11 NODE_54211_length_323_cov_2.274306_g46280_i0forward_frame_3 - 0.12 11.3 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Nicotine adenine dinucleotide glycohydrolase (NADase) SLATT_5 PF18160.1 NODE_54210_length_323_cov_2.312500_g46279_i0forward_frame_3 - 0.81 9.0 5.2 0.97 8.7 5.2 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 PRKCSH_1 PF13015.6 NODE_54208_length_323_cov_2.343750_g46277_i0reverse_frame_2 - 0.13 11.9 0.3 0.16 11.6 0.3 1.1 1 0 0 1 1 1 0 Glucosidase II beta subunit-like protein OmdA PF13376.6 NODE_54207_length_323_cov_2.350694_g46276_i0reverse_frame_3 - 0.016 15.2 0.0 0.024 14.7 0.0 1.3 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated DUF1651 PF07864.11 NODE_54205_length_323_cov_2.378472_g46274_i0forward_frame_3 - 0.15 12.4 0.1 0.23 11.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1651) Csm4_C PF17953.1 NODE_54205_length_323_cov_2.378472_g46274_i0forward_frame_2 - 0.025 14.4 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 CRISPR Csm4 C-terminal domain UPF0370 PF13980.6 NODE_54202_length_323_cov_2.600694_g46271_i0reverse_frame_3 - 0.0027 17.7 2.0 0.19 11.8 0.2 2.2 2 0 0 2 2 2 2 Uncharacterised protein family (UPF0370) DOT1 PF08123.13 NODE_54202_length_323_cov_2.600694_g46271_i0reverse_frame_3 - 0.042 13.4 0.9 0.041 13.4 0.9 1.1 1 0 0 1 1 1 0 Histone methylation protein DOT1 Daxx PF03344.15 NODE_54199_length_323_cov_2.670139_g46268_i0forward_frame_3 - 0.049 13.7 0.0 0.071 13.2 0.0 1.3 1 0 0 1 1 1 0 Daxx N-terminal Rassf1C-interacting domain Endonuc_BglI PF14562.6 NODE_54198_length_323_cov_2.715278_g46267_i0reverse_frame_3 - 0.2 10.7 0.0 0.24 10.5 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease BglI DUF4077 PF13295.6 NODE_54194_length_323_cov_3.784722_g46263_i0forward_frame_3 - 0.03 14.2 7.8 0.032 14.1 7.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) NARP1 PF12569.8 NODE_54193_length_323_cov_3.812500_g46262_i0reverse_frame_3 - 0.044 12.7 2.9 0.047 12.6 2.9 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 HHV6-IE PF03753.13 NODE_54193_length_323_cov_3.812500_g46262_i0reverse_frame_3 - 1.4 6.3 6.1 1.5 6.1 6.1 1.0 1 0 0 1 1 1 0 Human herpesvirus 6 immediate early protein PGBA_C PF15437.6 NODE_54193_length_323_cov_3.812500_g46262_i0reverse_frame_3 - 8.7 6.8 12.1 24 5.4 12.2 1.7 1 1 1 2 2 2 0 Plasminogen-binding protein pgbA C-terminal Xlink PF00193.17 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_3 - 0.013 15.9 0.5 0.018 15.4 0.5 1.2 1 0 0 1 1 1 0 Extracellular link domain ICL PF00463.21 NODE_54187_length_323_cov_37.774306_g46256_i0reverse_frame_3 - 0.068 11.6 1.7 0.081 11.4 1.7 1.0 1 0 0 1 1 1 0 Isocitrate lyase family Bud13 PF09736.9 NODE_54187_length_323_cov_37.774306_g46256_i0reverse_frame_2 - 0.34 11.3 12.9 0.38 11.2 12.9 1.0 1 0 0 1 1 1 0 Pre-mRNA-splicing factor of RES complex Presenilin PF01080.17 NODE_54187_length_323_cov_37.774306_g46256_i0reverse_frame_2 - 8 5.1 8.9 9.3 4.9 8.9 1.0 1 0 0 1 1 1 0 Presenilin Vif PF00559.17 NODE_54187_length_323_cov_37.774306_g46256_i0forward_frame_3 - 0.24 11.0 0.2 0.28 10.8 0.2 1.1 1 0 0 1 1 1 0 Retroviral Vif (Viral infectivity) protein TRAF_BIRC3_bd PF16673.5 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.012 15.4 0.9 0.019 14.7 0.9 1.3 1 0 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain SPATA1_C PF15743.5 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.02 14.9 0.2 0.027 14.5 0.2 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus Rx_N PF18052.1 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.027 14.7 0.4 0.035 14.4 0.4 1.2 1 0 0 1 1 1 0 Rx N-terminal domain BRE1 PF08647.11 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.029 14.4 0.8 0.039 14.0 0.8 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase Spc24 PF08286.11 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.033 14.4 0.2 0.04 14.2 0.2 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 CENP-F_N PF10481.9 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.064 12.9 0.4 0.074 12.7 0.4 1.0 1 0 0 1 1 1 0 Cenp-F N-terminal domain ECM11 PF15463.6 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.11 13.1 0.2 0.13 12.8 0.2 1.1 1 0 0 1 1 1 0 Extracellular mutant protein 11 RCC1_2 PF13540.6 NODE_54181_length_323_cov_59.555556_g46250_i0forward_frame_3 - 0.00092 18.9 3.7 0.15 11.9 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_54181_length_323_cov_59.555556_g46250_i0forward_frame_3 - 0.094 12.8 0.1 5.3 7.1 0.0 2.1 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PheRS_DBD2 PF18554.1 NODE_54181_length_323_cov_59.555556_g46250_i0forward_frame_3 - 0.18 11.8 2.5 4.2 7.4 0.3 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Ketoacyl-synt_C PF02801.22 NODE_54180_length_323_cov_62.375000_g46249_i0reverse_frame_3 - 0.00048 20.1 0.3 0.00079 19.4 0.3 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain Clathrin_H_link PF13838.6 NODE_54179_length_323_cov_63.423611_g46248_i0forward_frame_3 - 0.48 10.4 4.1 0.84 9.6 0.7 2.1 1 1 1 2 2 2 0 Clathrin-H-link Conotoxin PF02950.17 NODE_54179_length_323_cov_63.423611_g46248_i0forward_frame_2 - 5 8.2 7.6 2.2 9.3 0.8 2.1 2 0 0 2 2 2 0 Conotoxin Folate_carrier PF01770.18 NODE_54177_length_323_cov_63.836806_g46246_i0reverse_frame_3 - 0.04 12.7 0.1 0.042 12.6 0.1 1.0 1 0 0 1 1 1 0 Reduced folate carrier Hydrolase PF00702.26 NODE_54177_length_323_cov_63.836806_g46246_i0reverse_frame_2 - 0.12 12.7 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Ac81 PF05820.11 NODE_54177_length_323_cov_63.836806_g46246_i0forward_frame_3 - 0.094 12.3 5.4 1.1 8.7 0.5 2.0 2 0 0 2 2 2 0 Baculoviridae AC81 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks220.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks220.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks220.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks220.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-C2H2_10 PF16588.5 NODE_54172_length_323_cov_72.659722_g46241_i0reverse_frame_3 - 0.22 11.3 0.7 0.22 11.3 0.7 1.8 2 0 0 2 2 2 0 C2H2 zinc-finger DUF5310 PF17237.2 NODE_54169_length_323_cov_78.895833_g46238_i0forward_frame_3 - 0.0098 15.7 0.3 0.0098 15.7 0.3 1.8 2 0 0 2 2 2 1 Family of unknown function (DUF5310) DUF553 PF04473.12 NODE_54168_length_323_cov_78.961806_g46237_i0reverse_frame_3 - 0.041 13.4 0.4 0.046 13.3 0.4 1.1 1 0 0 1 1 1 0 Transglutaminase-like domain Lip_prot_lig_C PF10437.9 NODE_54168_length_323_cov_78.961806_g46237_i0reverse_frame_3 - 0.061 13.3 0.0 0.09 12.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus FLYWCH PF04500.16 NODE_54164_length_323_cov_92.333333_g46233_i0reverse_frame_2 - 0.011 15.8 1.0 2.1 8.5 0.1 2.2 2 0 0 2 2 2 0 FLYWCH zinc finger domain DUF4777 PF16007.5 NODE_54161_length_323_cov_100.104167_g46230_i0reverse_frame_2 - 0.0031 17.7 0.1 0.021 15.1 0.1 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4777) FeS_assembly_P PF01883.19 NODE_54157_length_323_cov_122.732639_g46226_i0reverse_frame_3 - 0.097 12.9 0.0 0.22 11.7 0.0 1.6 2 0 0 2 2 2 0 Iron-sulfur cluster assembly protein Hydin_ADK PF17213.3 NODE_54157_length_323_cov_122.732639_g46226_i0forward_frame_2 - 0.07 13.4 0.3 0.07 13.4 0.3 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain DUF3915 PF13054.6 NODE_54157_length_323_cov_122.732639_g46226_i0forward_frame_2 - 0.24 11.4 4.9 0.35 10.9 4.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) BtrH_N PF14399.6 NODE_54153_length_323_cov_139.135417_g46222_i0reverse_frame_2 - 0.13 12.5 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal DHFR_2 PF06442.11 NODE_54150_length_323_cov_183.538194_g46219_i0forward_frame_3 - 0.19 11.6 0.6 0.45 10.4 0.3 1.9 1 1 1 2 2 2 0 R67 dihydrofolate reductase Ras PF00071.22 NODE_54147_length_323_cov_205.461806_g46216_i0reverse_frame_2 - 3e-17 62.7 0.2 4.1e-17 62.3 0.2 1.2 1 0 0 1 1 1 1 Ras family IL3Ra_N PF18611.1 NODE_54147_length_323_cov_205.461806_g46216_i0forward_frame_3 - 0.02 14.9 0.1 0.031 14.3 0.1 1.3 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain CTP_transf_1 PF01148.20 NODE_54146_length_323_cov_211.388889_g46215_i0forward_frame_3 - 0.045 13.5 5.5 0.051 13.3 5.5 1.0 1 0 0 1 1 1 0 Cytidylyltransferase family Cys_rich_CWC PF14375.6 NODE_54146_length_323_cov_211.388889_g46215_i0forward_frame_3 - 0.089 13.2 0.8 8.5 6.9 0.0 2.1 2 0 0 2 2 2 0 Cysteine-rich CWC Fanconi_A PF03511.14 NODE_54146_length_323_cov_211.388889_g46215_i0forward_frame_3 - 8.3 6.4 11.0 3.2 7.7 0.9 2.4 2 1 0 2 2 2 0 Fanconi anaemia group A protein Cren7 PF11520.8 NODE_54146_length_323_cov_211.388889_g46215_i0forward_frame_2 - 0.03 14.3 0.0 8.1 6.5 0.0 2.1 2 0 0 2 2 2 0 Chromatin protein Cren7 PAE PF03283.13 NODE_54144_length_323_cov_420.475694_g46213_i0reverse_frame_2 - 0.075 12.1 0.1 0.075 12.1 0.1 1.1 1 0 0 1 1 1 0 Pectinacetylesterase HC2 PF07382.11 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_3 - 3.6 7.6 13.9 0.38 10.8 2.5 2.8 1 1 2 3 3 3 0 Histone H1-like nucleoprotein HC2 DUF374 PF04028.13 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.014 14.9 1.1 3 7.5 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF374) Mg_chelatase_C PF13335.6 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.048 14.3 0.4 13 6.5 0.1 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI C-terminal OCC1 PF15506.6 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.051 13.7 1.3 10 6.4 0.1 2.3 2 0 0 2 2 2 0 OCC1 family DUF782 PF05614.11 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.058 13.8 0.9 43 4.6 0.0 3.2 3 0 0 3 3 3 0 Circovirus protein of unknown function (DUF782) LPD23 PF18838.1 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.26 11.1 1.8 14 5.6 0.1 2.1 2 0 0 2 2 2 0 Large polyvalent protein associated domain 23 SCAB-PH PF17684.1 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.27 11.5 3.1 1.6 9.0 0.1 2.8 1 1 2 3 3 3 0 PH domain of plant-specific actin-binding protein zf_C2H2_13 PF18508.1 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.3 10.7 1.2 70 3.1 0.0 3.0 3 0 0 3 3 3 0 Zinc finger domain CXCXC PF03128.14 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_3 - 0.04 14.3 0.7 1.5 9.4 0.6 2.7 2 0 0 2 2 2 0 CXCXC repeat IL3 PF02059.15 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_3 - 0.054 13.5 0.4 10 6.2 0.0 2.1 2 0 0 2 2 2 0 Interleukin-3 ATXN-1_C PF12547.8 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_3 - 0.09 13.1 2.0 8.8 6.8 0.0 3.1 3 0 0 3 3 3 0 Capicua transcriptional repressor modulator DUF3270 PF11674.8 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_3 - 0.82 9.9 6.0 5.2 7.3 0.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) Flag1_repress PF03614.13 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.00059 19.7 0.0 0.33 10.7 0.0 2.1 2 0 0 2 2 2 2 Repressor of phase-1 flagellin zf-C3Hc3H PF13891.6 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.0039 17.5 0.7 2.8 8.4 0.1 2.3 1 1 1 2 2 2 2 Potential DNA-binding domain BRX_assoc PF16627.5 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.029 14.5 0.0 8.7 6.6 0.0 2.3 2 0 0 2 2 2 0 Unstructured region between BRX_N and BRX domain CxC6 PF18721.1 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.056 13.7 2.3 5.6 7.3 0.3 2.2 1 1 1 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases DUF1072 PF06380.11 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.55 10.1 5.3 8.9 6.3 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) DUF2975 PF11188.8 NODE_54142_length_323_cov_574.809028_g46211_i0reverse_frame_2 - 0.23 11.4 18.9 0.27 11.1 18.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) HTH_54 PF18607.1 NODE_54138_length_323_cov_6261.593750_g46208_i0reverse_frame_3 - 0.031 14.4 0.0 0.043 13.9 0.0 1.1 1 0 0 1 1 1 0 ParA helix turn helix domain VIT1 PF01988.19 NODE_54137_length_324_cov_1.273356_g46207_i0forward_frame_3 - 0.034 14.0 0.0 0.035 14.0 0.0 1.1 1 0 0 1 1 1 0 VIT family HJURP_mid PF12346.8 NODE_54136_length_324_cov_1.328720_g46206_i0reverse_frame_2 - 0.13 12.8 3.3 0.15 12.5 3.3 1.2 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat KorB PF08535.10 NODE_54132_length_324_cov_1.487889_g46202_i0reverse_frame_2 - 0.018 15.1 0.0 0.037 14.1 0.0 1.5 1 1 0 1 1 1 0 KorB domain Anemone_cytotox PF06369.12 NODE_54129_length_324_cov_1.719723_g46199_i0forward_frame_3 - 0.025 14.2 0.0 0.03 13.9 0.0 1.1 1 0 0 1 1 1 0 Sea anemone cytotoxic protein Pentapeptide_4 PF13599.6 NODE_54124_length_324_cov_1.882353_g46194_i0reverse_frame_2 - 0.11 12.6 0.8 0.36 11.0 0.7 1.8 1 1 1 2 2 2 0 Pentapeptide repeats (9 copies) UPF0688 PF15772.5 NODE_54123_length_324_cov_1.916955_g46193_i0forward_frame_3 - 0.12 12.6 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 UPF0688 family Hairy_orange PF07527.13 NODE_54122_length_324_cov_1.937716_g46192_i0forward_frame_2 - 0.043 14.0 1.5 0.1 12.8 0.8 1.9 1 1 1 2 2 2 0 Hairy Orange HTH_40 PF14493.6 NODE_54119_length_324_cov_1.989619_g46189_i0forward_frame_2 - 0.013 15.9 0.5 0.018 15.5 0.5 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Lipin_mid PF16876.5 NODE_54116_length_324_cov_2.193772_g46186_i0reverse_frame_3 - 0.18 12.0 0.1 0.34 11.1 0.1 1.4 1 0 0 1 1 1 0 Lipin/Ned1/Smp2 multi-domain protein middle domain zf-C2H2 PF00096.26 NODE_54116_length_324_cov_2.193772_g46186_i0forward_frame_2 - 0.37 11.3 1.7 0.48 11.0 0.4 1.9 2 0 0 2 2 2 0 Zinc finger, C2H2 type OstA PF03968.14 NODE_54112_length_324_cov_2.404844_g46182_i0forward_frame_2 - 0.14 12.4 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 OstA-like protein CUB_2 PF02408.20 NODE_54110_length_324_cov_2.515571_g46180_i0reverse_frame_2 - 0.027 14.2 0.1 0.031 14.0 0.1 1.2 1 0 0 1 1 1 0 CUB-like domain GGDEF PF00990.21 NODE_54108_length_324_cov_2.598616_g46178_i0forward_frame_2 - 2.4e-26 92.4 0.0 2.6e-26 92.3 0.0 1.0 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain DUF5579 PF17742.1 NODE_54106_length_324_cov_2.643599_g46176_i0forward_frame_2 - 0.02 14.4 0.7 0.025 14.2 0.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5579) zf-CGNR PF11706.8 NODE_54105_length_324_cov_2.757785_g46175_i0forward_frame_2 - 0.36 10.7 4.0 0.55 10.1 0.0 2.4 2 1 0 2 2 2 0 CGNR zinc finger Ran_BP1 PF00638.18 NODE_54104_length_324_cov_2.840830_g46174_i0forward_frame_2 - 0.077 13.2 0.0 0.089 13.1 0.0 1.1 1 0 0 1 1 1 0 RanBP1 domain Beta-lactamase PF00144.24 NODE_54096_length_324_cov_3.608997_g46166_i0reverse_frame_3 - 7.8e-09 35.2 0.1 8.2e-09 35.1 0.1 1.0 1 0 0 1 1 1 1 Beta-lactamase tRNA-synt_2d PF01409.20 NODE_54095_length_324_cov_4.391003_g46165_i0reverse_frame_3 - 0.0033 16.9 0.1 0.0039 16.7 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) KIX_2 PF16987.5 NODE_54095_length_324_cov_4.391003_g46165_i0reverse_frame_3 - 0.04 13.9 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 KIX domain DUF2842 PF11003.8 NODE_54090_length_324_cov_54.567474_g46160_i0reverse_frame_3 - 0.22 11.8 2.6 0.33 11.2 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2842) DUF3657 PF12394.8 NODE_54090_length_324_cov_54.567474_g46160_i0reverse_frame_2 - 4.3e-05 24.0 0.1 7e-05 23.3 0.1 1.4 1 0 0 1 1 1 1 Protein FAM135 RB_B PF01857.20 NODE_54087_length_324_cov_63.564014_g46157_i0reverse_frame_3 - 0.059 13.4 0.3 0.074 13.1 0.3 1.1 1 0 0 1 1 1 0 Retinoblastoma-associated protein B domain RolB_RolC PF02027.17 NODE_54087_length_324_cov_63.564014_g46157_i0forward_frame_2 - 0.018 14.7 0.0 0.021 14.5 0.0 1.1 1 0 0 1 1 1 0 RolB/RolC glucosidase family DUF4476 PF14771.6 NODE_54081_length_324_cov_76.608997_g46151_i0forward_frame_2 - 0.057 13.7 2.7 0.22 11.8 0.6 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4476) Glyco_hydro_31 PF01055.26 NODE_54078_length_324_cov_86.415225_g46148_i0reverse_frame_2 - 4.5e-15 55.8 0.3 5.2e-15 55.6 0.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Sprouty PF05210.13 NODE_54078_length_324_cov_86.415225_g46148_i0forward_frame_3 - 0.18 12.2 2.2 0.24 11.8 2.2 1.2 1 0 0 1 1 1 0 Sprouty protein (Spry) zf-CW PF07496.15 NODE_54074_length_324_cov_92.186851_g46144_i0reverse_frame_2 - 0.025 14.6 0.7 0.04 13.9 0.7 1.3 1 0 0 1 1 1 0 CW-type Zinc Finger zn-ribbon_14 PF16503.5 NODE_54073_length_324_cov_98.044983_g46143_i0reverse_frame_3 - 0.013 15.0 0.1 0.023 14.2 0.1 1.4 1 0 0 1 1 1 0 Zinc-ribbon TPR_1 PF00515.28 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 6.8e-19 66.8 1.8 2.5e-06 27.0 0.2 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 2.1e-14 52.4 0.2 0.00027 20.8 0.0 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 1.1e-13 50.6 2.7 7.2e-06 25.6 0.0 3.1 1 1 2 3 3 3 3 TPR repeat TPR_17 PF13431.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 4.8e-11 42.2 0.2 9.9e-05 22.5 0.1 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 1.1e-10 40.9 0.8 0.0021 18.1 0.1 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 1.1e-06 29.2 0.0 0.00085 19.9 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 7.3e-06 26.2 0.4 0.0033 17.7 0.1 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 1.2e-05 25.3 0.0 0.0002 21.5 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 1.4e-05 24.8 0.5 0.017 15.1 0.0 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.00034 21.1 0.0 0.063 13.9 0.0 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_5 PF12688.7 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.0094 16.2 0.0 0.02 15.1 0.0 1.6 2 0 0 2 2 2 1 Tetratrico peptide repeat Ubiq-assoc PF09145.10 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.02 14.8 0.3 1 9.4 0.1 2.5 2 0 0 2 2 2 0 Ubiquitin-associated MIT PF04212.18 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.096 12.8 1.2 2.7 8.1 0.1 2.8 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain Aida_N PF08910.10 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.11 12.9 0.1 8.4 6.9 0.0 2.2 2 1 0 2 2 2 0 Aida N-terminus NTPase_1 PF03266.15 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.14 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 NTPase Presenilin PF01080.17 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_3 - 2.1 7.0 9.5 2.1 7.0 9.5 1.0 1 0 0 1 1 1 0 Presenilin RNA_pol_Rpc4 PF05132.14 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_3 - 3.1 8.2 12.0 3.3 8.1 12.0 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 UPF0565 PF10561.9 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_2 - 0.73 9.0 7.7 0.87 8.7 7.7 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 DUF4337 PF14235.6 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_2 - 7.2 6.7 23.3 8.1 6.5 23.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DDHD PF02862.17 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_2 - 10 6.2 11.8 11 6.1 11.8 1.1 1 0 0 1 1 1 0 DDHD domain NCOA_u2 PF16665.5 NODE_54069_length_324_cov_125.031142_g46139_i0forward_frame_2 - 0.011 16.1 0.5 0.015 15.6 0.5 1.2 1 0 0 1 1 1 0 Unstructured region on nuclear receptor coactivator protein Cas_NE0113 PF09623.10 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_3 - 0.011 15.4 0.2 0.013 15.2 0.2 1.1 1 0 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) UCH PF00443.29 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_2 - 4e-15 56.0 1.9 4.4e-15 55.9 1.9 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_2 - 0.0084 15.7 0.1 0.0098 15.5 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase TMEM173 PF15009.6 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_2 - 0.036 13.2 0.1 0.046 12.9 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 173 Orexin PF02072.15 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_2 - 0.093 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Prepro-orexin Hid1 PF12722.7 NODE_54064_length_324_cov_135.885813_g46134_i0reverse_frame_2 - 1.2 7.2 8.6 1.4 6.9 8.6 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Nop14 PF04147.12 NODE_54064_length_324_cov_135.885813_g46134_i0reverse_frame_2 - 3.6 5.7 17.2 3.9 5.6 17.2 1.0 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_54064_length_324_cov_135.885813_g46134_i0reverse_frame_2 - 8.8 4.5 12.3 9.1 4.4 12.3 1.0 1 0 0 1 1 1 0 CDC45-like protein ANKH PF07260.11 NODE_54057_length_324_cov_185.667820_g46127_i0forward_frame_3 - 0.077 12.2 0.0 0.098 11.8 0.0 1.0 1 0 0 1 1 1 0 Progressive ankylosis protein (ANKH) Astro_capsid_N PF03115.14 NODE_54054_length_324_cov_228.093426_g46124_i0forward_frame_2 - 0.019 13.7 0.4 0.022 13.5 0.4 1.0 1 0 0 1 1 1 0 Astrovirus capsid protein precursor Nodulin_late PF07127.11 NODE_54052_length_324_cov_244.664360_g46122_i0reverse_frame_2 - 0.12 12.7 0.3 0.2 12.0 0.3 1.4 1 0 0 1 1 1 0 Late nodulin protein NDUF_B7 PF05676.13 NODE_54048_length_324_cov_1216.913495_g46118_i0reverse_frame_3 - 0.067 12.9 0.2 0.12 12.1 0.2 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) TIP49_C PF17856.1 ORF99932 - 0.056 13.6 0.1 0.13 12.5 0.0 1.5 1 1 0 1 1 1 0 TIP49 AAA-lid domain ubiquitin PF00240.23 ORF99421 - 0.077 12.7 0.0 0.15 11.8 0.0 1.5 1 1 0 1 1 1 0 Ubiquitin family Ax_dynein_light PF10211.9 ORF98983 - 1.7e-25 90.0 0.0 2e-25 89.8 0.0 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Peptidase_M75 PF09375.10 ORF9889 - 0.011 15.2 0.2 0.013 15.0 0.2 1.1 1 0 0 1 1 1 0 Imelysin DUF2997 PF11211.8 ORF98839 - 0.13 12.1 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) tRNA_m1G_MT PF01746.21 ORF98778 - 6.6e-17 61.9 0.2 1.3e-16 60.9 0.0 1.5 2 0 0 2 2 2 1 tRNA (Guanine-1)-methyltransferase BTHB PF18410.1 ORF98778 - 0.02 14.7 0.7 0.076 12.8 0.0 2.0 1 1 0 2 2 2 0 Basic tilted helix bundle domain TEA PF01285.18 ORF98778 - 0.024 14.7 0.6 0.2 11.7 0.6 2.3 1 1 0 1 1 1 0 TEA/ATTS domain NAD_binding_6 PF08030.12 ORF98450 - 2.1e-08 34.4 0.0 2.6e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 Ferric reductase NAD binding domain DUF4028 PF13220.6 ORF98450 - 0.038 13.8 0.1 0.061 13.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) tRNA_anti_2 PF13742.6 ORF98450 - 0.1 12.8 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain EamA PF00892.20 ORF98155 - 3.8e-06 27.1 3.7 4.6e-06 26.8 3.7 1.1 1 0 0 1 1 1 1 EamA-like transporter family Phage_P2_GpU PF06995.11 ORF97378 - 0.045 13.4 0.0 0.078 12.6 0.0 1.4 1 1 0 1 1 1 0 Phage P2 GpU DUF4315 PF14193.6 ORF97378 - 3 7.9 13.6 1.7 8.7 6.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4315) EF-hand_1 PF00036.32 ORF97130 - 2.4e-06 26.7 1.5 5.8e-06 25.5 1.5 1.7 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF97130 - 0.00016 21.3 0.5 0.00033 20.3 0.5 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF97130 - 0.021 15.3 7.3 0.045 14.2 7.3 1.8 1 1 0 1 1 1 0 EF-hand domain pair DUF2076 PF09849.9 ORF97130 - 0.77 9.8 11.0 0.95 9.5 11.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) BUD22 PF09073.10 ORF97130 - 1.5 8.1 23.9 1.5 8.0 23.9 1.1 1 0 0 1 1 1 0 BUD22 FAM60A PF15396.6 ORF97130 - 3.2 7.7 4.6 3.5 7.6 4.6 1.1 1 0 0 1 1 1 0 Protein Family FAM60A DUF913 PF06025.12 ORF97130 - 3.6 6.5 7.2 4.1 6.3 7.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) NAD_binding_6 PF08030.12 ORF97114 - 2.1e-08 34.4 0.0 2.6e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 Ferric reductase NAD binding domain DUF4028 PF13220.6 ORF97114 - 0.038 13.8 0.1 0.061 13.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) tRNA_anti_2 PF13742.6 ORF97114 - 0.1 12.8 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain ubiquitin PF00240.23 ORF95678 - 0.077 12.7 0.0 0.15 11.8 0.0 1.5 1 1 0 1 1 1 0 Ubiquitin family Robl_LC7 PF03259.17 ORF95507 - 4.5e-15 55.2 0.0 5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain Pkinase PF00069.25 ORF95014 - 1.4e-24 86.9 0.4 1.4e-24 86.9 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95014 - 5.5e-16 58.6 0.1 5.7e-16 58.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF95014 - 0.028 14.0 0.2 0.032 13.8 0.2 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 TPR_12 PF13424.6 ORF94457 - 0.0006 20.1 0.3 0.0012 19.1 0.1 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF94457 - 0.079 13.6 3.7 0.25 12.1 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Lung_7-TM_R PF06814.13 ORF94445 - 0.021 14.1 5.2 0.024 13.9 5.2 1.1 1 0 0 1 1 1 0 Lung seven transmembrane receptor CAAX_1 PF15895.5 ORF94426 - 0.34 10.8 7.1 0.82 9.5 0.6 2.2 1 1 1 2 2 2 0 CAAX box cerebral protein 1 U-box PF04564.15 ORF94413 - 0.00036 20.7 0.1 0.00061 19.9 0.1 1.4 1 0 0 1 1 1 1 U-box domain LIFR_N PF18207.1 ORF94413 - 0.042 14.2 0.2 0.094 13.1 0.1 1.6 1 1 1 2 2 2 0 Leukemia inhibitory factor receptor N-terminal domain KIAA1430 PF13879.6 ORF94162 - 0.0028 18.4 13.9 0.0049 17.6 13.8 1.5 1 1 0 1 1 1 1 KIAA1430 homologue SURF6 PF04935.12 ORF94162 - 0.025 14.4 7.0 0.029 14.2 7.0 1.1 1 0 0 1 1 1 0 Surfeit locus protein 6 Flu_B_M2 PF04772.12 ORF94162 - 0.083 13.1 1.3 0.11 12.7 1.1 1.4 1 1 0 1 1 1 0 Influenza B matrix protein 2 (BM2) Pkinase PF00069.25 ORF9416 - 2.6e-08 33.5 0.0 3e-08 33.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain V-ATPase_H_C PF11698.8 ORF93707 - 0.043 13.9 0.2 0.059 13.5 0.2 1.2 1 0 0 1 1 1 0 V-ATPase subunit H Myb_DNA-bind_3 PF12776.7 ORF93707 - 0.12 13.3 1.1 0.18 12.8 1.1 1.3 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain TEX33 PF15400.6 ORF93562 - 0.098 13.2 0.0 0.098 13.2 0.0 1.2 1 0 0 1 1 1 0 Testis-expressed sequence 33 protein family Cyclin_N PF00134.23 ORF933 - 2.3e-22 79.1 0.7 2.5e-21 75.7 0.2 1.9 2 0 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF933 - 1.4e-07 31.6 0.1 2.2e-07 31.0 0.1 1.3 1 0 0 1 1 1 1 Cyclin, C-terminal domain Cyt-b5 PF00173.28 ORF93213 - 5.7e-22 77.6 0.1 6.5e-22 77.5 0.1 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FAM209 PF15206.6 ORF92826 - 0.12 12.1 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 FAM209 family MCC-bdg_PDZ PF10506.9 ORF9278 - 0.017 15.1 0.0 0.027 14.5 0.0 1.3 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Adeno_E1B_19K PF01691.16 ORF9278 - 0.086 12.4 0.0 8.8 5.9 0.0 2.1 2 0 0 2 2 2 0 Adenovirus E1B 19K protein / small t-antigen Phlebovirus_G1 PF07243.11 ORF92502 - 0.03 12.7 0.8 0.031 12.7 0.8 1.2 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 DiSB-ORF2_chro PF16506.5 ORF9232 - 0.0055 16.7 1.9 0.063 13.3 0.5 2.2 2 0 0 2 2 2 2 Putative virion glycoprotein of insect viruses DUF5582 PF17819.1 ORF90772 - 0.11 13.0 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5582) IDO PF01231.18 ORF90571 - 0.17 10.6 0.6 0.2 10.4 0.6 1.0 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase Capsule_synth PF05159.14 ORF90399 - 0.023 14.1 1.1 0.027 13.9 1.1 1.0 1 0 0 1 1 1 0 Capsule polysaccharide biosynthesis protein SPC25 PF06703.11 ORF90243 - 0.1 12.4 2.6 0.17 11.7 2.7 1.3 1 1 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Cyt-b5 PF00173.28 ORF90076 - 5.7e-22 77.6 0.1 6.5e-22 77.5 0.1 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain OprD PF03573.13 ORF89397 - 1.6e-05 24.1 0.0 1.8e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 outer membrane porin, OprD family PAP_fibrillin PF04755.12 ORF89084 - 0.049 13.6 0.1 0.059 13.3 0.1 1.1 1 0 0 1 1 1 0 PAP_fibrillin DUF677 PF05055.12 ORF88230 - 0.0054 15.7 0.8 0.008 15.1 0.8 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF677) Helo_like_N PF17111.5 ORF87845 - 0.037 13.4 0.4 0.04 13.3 0.4 1.2 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins YbjQ_1 PF01906.17 ORF87342 - 2.6e-40 137.3 0.7 2.9e-40 137.1 0.7 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding DUF3089 PF11288.8 ORF87304 - 0.14 11.7 0.1 0.28 10.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3089) TadE PF07811.12 ORF8721 - 0.97 9.8 6.5 1.7 9.0 6.5 1.4 1 0 0 1 1 1 0 TadE-like protein Thiol_cytolysin PF01289.19 ORF8711 - 0.01 14.8 1.5 0.011 14.7 1.5 1.0 1 0 0 1 1 1 0 Thiol-activated cytolysin YokU PF14122.6 ORF8711 - 0.23 11.5 6.8 0.081 12.9 3.9 1.7 1 1 1 2 2 2 0 YokU-like protein, putative antitoxin Cyt-b5 PF00173.28 ORF86766 - 5.8e-22 77.6 0.1 6.6e-22 77.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Spc7 PF08317.11 ORF86206 - 6.3e-05 22.0 10.3 6.6e-05 21.9 10.3 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein HIP1_clath_bdg PF16515.5 ORF86206 - 0.00059 20.4 7.6 0.00059 20.4 7.6 1.8 2 0 0 2 2 2 1 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF3552 PF12072.8 ORF86206 - 0.037 13.5 15.5 0.084 12.3 15.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) CEP209_CC5 PF16574.5 ORF86206 - 0.041 14.1 13.3 0.15 12.2 4.4 2.1 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 HemX PF04375.14 ORF86206 - 0.075 12.3 6.3 0.089 12.1 6.3 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF1664 PF07889.12 ORF86206 - 0.1 12.7 6.5 0.033 14.2 3.7 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Phlebovirus_NSM PF07246.11 ORF86206 - 0.11 11.8 9.1 0.12 11.7 9.1 1.1 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M 5_nucleotid PF05761.14 ORF86206 - 0.21 10.5 3.5 0.22 10.4 3.5 1.1 1 0 0 1 1 1 0 5' nucleotidase family Exonuc_VII_L PF02601.15 ORF86206 - 0.22 11.0 5.8 0.27 10.8 5.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Jnk-SapK_ap_N PF09744.9 ORF86206 - 0.23 11.7 10.6 0.091 13.0 7.7 1.6 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 TMPIT PF07851.13 ORF86206 - 0.28 10.4 4.5 0.33 10.2 4.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF4407 PF14362.6 ORF86206 - 0.32 10.3 6.0 0.39 10.0 6.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) NPV_P10 PF05531.12 ORF86206 - 0.34 11.4 4.6 2.8 8.5 2.8 2.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Seryl_tRNA_N PF02403.22 ORF86206 - 0.69 10.2 16.0 4.3 7.6 0.6 2.5 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF2203 PF09969.9 ORF86206 - 1.3 9.8 6.8 0.73 10.6 4.5 1.6 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF86206 - 1.3 8.0 9.9 1.5 7.8 9.9 1.3 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YlqD PF11068.8 ORF86206 - 1.4 9.3 13.6 0.69 10.3 10.0 1.8 1 1 1 2 2 2 0 YlqD protein Phage_GP20 PF06810.11 ORF86206 - 2.6 7.8 16.7 5.2 6.9 13.2 2.0 1 1 1 2 2 2 0 Phage minor structural protein GP20 DivIC PF04977.15 ORF86206 - 2.6 7.9 14.4 9.5 6.1 5.5 2.7 1 1 1 2 2 2 0 Septum formation initiator TBCA PF02970.16 ORF86206 - 5.8 7.3 13.8 3.6 8.0 9.6 2.1 1 1 1 2 2 2 0 Tubulin binding cofactor A DUF4200 PF13863.6 ORF86206 - 9.5 6.7 21.0 50 4.3 21.0 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) EF-hand_7 PF13499.6 ORF86025 - 5e-14 52.5 6.8 3e-09 37.2 0.8 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF86025 - 7.9e-14 50.1 6.0 6.5e-06 25.3 0.2 3.2 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF86025 - 3.1e-11 42.2 6.4 6.1e-06 25.7 0.8 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF86025 - 2.3e-08 33.2 1.8 0.0016 17.9 0.2 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF86025 - 4.8e-07 29.5 7.6 0.04 13.8 0.7 3.1 1 1 2 3 3 3 3 EF-hand domain pair GATase PF00117.28 ORF86021 - 7.1e-26 91.2 0.0 7.8e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF86021 - 1.3e-06 28.3 0.0 1.5e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Peptidase C26 Pannexin_like PF12534.8 ORF85952 - 1.3 8.0 11.7 1.5 7.8 11.7 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 CSRNP_N PF16019.5 ORF85952 - 2.8 7.8 11.8 3.2 7.6 11.8 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus CSG2 PF16965.5 ORF85952 - 4.5 6.1 8.6 5.4 5.9 8.6 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator Zip PF02535.22 ORF85952 - 5.5 6.1 10.2 6 6.0 10.2 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF85952 - 8.2 5.1 13.4 8.7 5.0 13.4 1.0 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 ORF85952 - 8.6 5.0 16.3 8.6 5.0 16.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 FAM60A PF15396.6 ORF85952 - 8.7 6.3 14.6 9.7 6.1 14.6 1.1 1 0 0 1 1 1 0 Protein Family FAM60A CDC45 PF02724.14 ORF85952 - 9 4.4 18.1 9.6 4.4 18.1 1.0 1 0 0 1 1 1 0 CDC45-like protein Ku_PK_bind PF08785.11 ORF85626 - 0.0052 16.9 0.6 0.0081 16.3 0.6 1.5 1 1 0 1 1 1 1 Ku C terminal domain like DUF1866 PF08952.11 ORF85626 - 0.085 12.7 0.4 0.1 12.4 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1866) Shisa PF13908.6 ORF84499 - 0.22 11.8 0.4 0.33 11.2 0.0 1.5 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator PP2C PF00481.21 ORF84346 - 9e-19 68.1 0.0 9.7e-19 68.0 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF84346 - 2.1e-05 24.5 0.0 2.3e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) YfcL PF08891.11 ORF84138 - 0.16 12.3 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 YfcL protein YfcL PF08891.11 ORF84057 - 0.16 12.3 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 YfcL protein Anticodon_1 PF08264.13 ORF81996 - 1.9e-09 37.6 1.1 2.2e-09 37.4 1.1 1.0 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA DUF4231 PF14015.6 ORF81554 - 0.075 13.5 0.1 0.11 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) Yip1 PF04893.17 ORF81554 - 0.19 11.4 9.4 0.29 10.9 9.3 1.5 1 1 0 1 1 1 0 Yip1 domain DUF5004 PF16395.5 ORF80466 - 0.029 14.4 0.0 0.038 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5004) EF-hand_1 PF00036.32 ORF80401 - 6.7e-14 50.3 0.1 6.4e-06 25.4 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF80401 - 6.1e-12 44.5 0.2 5.3e-05 22.8 0.0 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF80401 - 4.4e-11 43.1 0.0 6.1e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF80401 - 1.3e-10 40.3 0.1 7.6e-05 22.0 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF80401 - 3.5e-08 33.2 0.6 4.5e-06 26.4 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair DUF674 PF05056.12 ORF80401 - 0.031 13.2 0.3 0.032 13.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) EF-hand_4 PF12763.7 ORF80401 - 0.041 13.8 1.3 0.33 10.9 0.1 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Cdc6_C PF09079.11 ORF80401 - 0.12 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain zf-BED PF02892.15 ORF8022 - 0.069 13.2 3.4 0.092 12.8 1.2 2.3 2 0 0 2 2 2 0 BED zinc finger Pentapeptide_4 PF13599.6 ORF79722 - 0.00048 20.2 0.2 0.0056 16.8 0.1 2.1 2 0 0 2 2 2 1 Pentapeptide repeats (9 copies) Lung_7-TM_R PF06814.13 ORF79311 - 0.021 14.1 5.2 0.024 13.9 5.2 1.1 1 0 0 1 1 1 0 Lung seven transmembrane receptor Streptin-Immun PF11083.8 ORF79244 - 0.011 16.2 2.3 0.081 13.3 0.3 2.0 1 1 1 2 2 2 0 Lantibiotic streptin immunity protein DUF454 PF04304.13 ORF79244 - 0.09 12.8 0.3 0.12 12.4 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF454) KxDL PF10241.9 ORF78531 - 0.023 15.0 3.1 0.035 14.4 3.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein TMPIT PF07851.13 ORF78531 - 0.13 11.5 0.4 0.14 11.4 0.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein Pox_G5 PF04599.12 ORF78531 - 0.24 10.3 0.6 0.3 10.1 0.6 1.0 1 0 0 1 1 1 0 Poxvirus G5 protein HHH_9 PF17674.1 ORF78531 - 0.28 12.1 2.1 0.65 10.9 2.1 1.7 1 1 0 1 1 1 0 HHH domain DivIC PF04977.15 ORF78531 - 0.77 9.6 10.0 1.4 8.7 0.9 2.1 1 1 1 2 2 2 0 Septum formation initiator Phostensin_N PF13916.6 ORF76297 - 1.1 9.7 5.0 5.9 7.3 0.8 2.1 1 1 1 2 2 2 0 PP1-regulatory protein, Phostensin N-terminal Fam20C PF06702.12 ORF76040 - 0.11 12.3 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Golgi casein kinase, C-terminal, Fam20 Acyl-CoA_dh_1 PF00441.24 ORF75929 - 7e-13 49.0 0.2 7.6e-13 48.9 0.2 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain RRM_1 PF00076.22 ORF75793 - 1.1e-19 70.0 0.1 1.4e-19 69.6 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF75793 - 0.00034 20.6 0.1 0.00048 20.1 0.1 1.3 1 0 0 1 1 1 1 RNA binding motif RL PF17797.1 ORF75793 - 0.011 15.7 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 RL domain RRM_5 PF13893.6 ORF75793 - 0.033 13.8 0.0 0.039 13.5 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF75793 - 0.098 12.8 0.0 0.23 11.6 0.0 1.8 1 1 0 1 1 1 0 RNA recognition motif Toxin_ToxA PF11584.8 ORF75104 - 0.068 13.2 0.4 0.12 12.3 0.2 1.5 1 1 0 1 1 1 0 Proteinaceous host-selective toxin ToxA Helo_like_N PF17111.5 ORF75029 - 0.036 13.4 0.4 0.04 13.3 0.4 1.2 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins Sugarporin_N PF11471.8 ORF75020 - 1.5 8.8 4.0 0.61 10.1 0.3 2.1 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension TcdA_TcdB_pore PF12920.7 ORF75020 - 4.2 5.5 10.5 4.4 5.4 10.5 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain Ax_dynein_light PF10211.9 ORF74833 - 5.4e-24 85.2 0.0 6.4e-24 84.9 0.0 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain EF-hand_6 PF13405.6 ORF74427 - 0.0046 16.8 0.0 0.0089 15.9 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF74427 - 0.0083 15.6 0.0 0.013 15.0 0.0 1.4 1 0 0 1 1 1 1 EF hand PhdYeFM_antitox PF02604.19 ORF74427 - 0.11 12.3 0.1 0.15 11.9 0.1 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Pkinase PF00069.25 ORF74268 - 3.5e-13 49.5 0.0 4.3e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF5357 PF17310.2 ORF74005 - 0.017 13.7 0.3 0.018 13.6 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5357) CENP-T_C PF15511.6 ORF73820 - 8.4e-09 35.5 0.1 1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF73820 - 3.5e-05 24.0 0.1 0.0001 22.5 0.0 1.8 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF73820 - 3.9e-05 23.7 0.1 5.7e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 ORF73820 - 7.1e-05 23.1 0.1 0.0001 22.6 0.1 1.4 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 ORF73820 - 0.00042 20.7 0.1 0.00051 20.4 0.1 1.2 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 ORF73820 - 0.0066 16.5 0.0 0.0086 16.1 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF73820 - 0.16 12.5 0.1 0.23 12.0 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Cyt-b5 PF00173.28 ORF73708 - 4.4e-21 74.8 0.0 5.2e-21 74.6 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain MFS_1 PF07690.16 ORF728 - 0.00047 19.2 9.7 0.00066 18.7 9.7 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Pro_isomerase PF00160.21 ORF72476 - 1e-10 42.1 0.0 2.5e-10 40.9 0.0 1.6 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF3089 PF11288.8 ORF72331 - 0.14 11.7 0.1 0.28 10.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3089) AA_permease PF00324.21 ORF7224 - 5.3e-09 35.2 12.9 5.8e-09 35.1 12.9 1.0 1 0 0 1 1 1 1 Amino acid permease DUF3810 PF12725.7 ORF7224 - 0.48 9.7 2.7 0.58 9.5 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Rab3-GTPase_cat PF13890.6 ORF71957 - 0.032 13.9 0.1 0.056 13.1 0.1 1.5 1 1 0 1 1 1 0 Rab3 GTPase-activating protein catalytic subunit EF-hand_6 PF13405.6 ORF71879 - 3.5e-08 32.8 0.3 0.00036 20.2 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF71879 - 1.7e-06 28.4 0.6 2.3e-06 28.0 0.6 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF71879 - 1.8e-06 27.1 0.2 0.0082 15.6 0.0 2.7 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF71879 - 0.00059 20.1 1.3 0.1 13.0 0.3 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_5 PF13202.6 ORF71879 - 0.0015 18.0 0.5 0.06 12.9 0.1 2.6 2 0 0 2 2 2 1 EF hand REC1 PF18501.1 ORF71879 - 0.0078 16.1 0.1 0.0088 16.0 0.1 1.1 1 0 0 1 1 1 1 Alpha helical recognition lobe domain ORC4_C PF14629.6 ORF71879 - 0.082 12.3 0.2 0.19 11.1 0.1 1.6 2 0 0 2 2 2 0 Origin recognition complex (ORC) subunit 4 C-terminus DUF4220 PF13968.6 ORF69801 - 0.14 11.5 2.7 0.18 11.2 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) ANAPC4_WD40 PF12894.7 ORF69575 - 1.6e-05 25.1 0.0 0.0088 16.3 0.0 2.1 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain RAB3GAP2_N PF14655.6 ORF69575 - 0.00013 21.3 0.1 0.016 14.5 0.1 1.9 1 1 1 2 2 2 2 Rab3 GTPase-activating protein regulatory subunit N-terminus Lactonase PF10282.9 ORF69575 - 0.0058 15.9 0.0 0.0074 15.6 0.0 1.2 1 0 0 1 1 1 1 Lactonase, 7-bladed beta-propeller WD40 PF00400.32 ORF69575 - 0.05 14.5 0.1 16 6.6 0.0 3.0 3 0 0 3 3 3 0 WD domain, G-beta repeat ELYS-bb PF16687.5 ORF69575 - 0.16 10.5 0.1 1.2 7.7 0.0 1.9 1 1 0 2 2 2 0 beta-propeller of ELYS nucleoporin Cucumopine_C PF18631.1 ORF67593 - 0.17 11.8 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain Ustilago_mating PF05722.12 ORF67248 - 0.7 9.4 7.0 0.83 9.1 7.0 1.1 1 0 0 1 1 1 0 Ustilago B locus mating-type protein SRTM1 PF15872.5 ORF66986 - 0.95 9.6 4.8 0.61 10.3 3.2 1.5 1 1 1 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 EnY2 PF10163.9 ORF66697 - 3.5e-29 101.0 1.4 4.2e-29 100.8 1.4 1.1 1 0 0 1 1 1 1 Transcription factor e(y)2 RPA_interact_N PF14766.6 ORF66697 - 0.078 12.6 1.1 0.17 11.5 1.1 1.7 1 0 0 1 1 1 0 Replication protein A interacting N-terminal PsbH PF00737.20 ORF66658 - 8.1e-07 28.7 1.7 1.3e-06 28.0 1.7 1.3 1 1 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 ORF66658 - 0.025 14.3 0.4 0.029 14.1 0.4 1.1 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF66658 - 0.034 14.5 0.0 0.054 13.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Sdh_cyt PF01127.22 ORF66658 - 0.087 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SEC-C PF02810.15 ORF66499 - 8.8 6.4 9.7 1.1 9.3 2.3 2.3 2 0 0 2 2 2 0 SEC-C motif HATPase_c PF02518.26 ORF6635 - 5.5e-19 68.7 0.0 6.2e-19 68.6 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF6635 - 0.00046 20.1 0.0 0.0006 19.8 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 ORF6635 - 0.053 13.4 0.0 0.11 12.3 0.0 1.6 1 1 1 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Neurexophilin PF06312.12 ORF6635 - 0.22 10.9 0.0 0.3 10.5 0.0 1.2 1 0 0 1 1 1 0 Neurexophilin CoA_binding_3 PF13727.6 ORF66218 - 7.3 6.6 10.4 3 7.8 6.2 1.9 1 1 1 2 2 2 0 CoA-binding domain DUF5465 PF17553.2 ORF657 - 0.012 15.9 1.9 2.2 9.0 0.6 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5465) Defensin_1 PF00323.19 ORF64699 - 0.049 14.2 1.3 14 6.3 0.6 2.4 2 0 0 2 2 2 0 Mammalian defensin DUF192 PF02643.15 ORF63394 - 0.025 14.7 4.3 5.8 7.1 0.2 3.0 1 1 2 3 3 3 0 Uncharacterized ACR, COG1430 Bac_small_YrzI PF09501.10 ORF63394 - 2.1 8.5 6.3 16 5.7 0.2 3.0 3 0 0 3 3 3 0 Probable sporulation protein (Bac_small_yrzI) DUF2614 PF11023.8 ORF63394 - 3.1 7.9 7.9 1.6 8.9 2.1 2.4 2 1 1 3 3 3 0 Zinc-ribbon containing domain DUF3097 PF11296.8 ORF62936 - 0.17 11.1 0.0 0.19 10.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3097) DUF4663 PF15668.5 ORF62936 - 0.29 10.1 2.2 0.34 9.9 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4663) DUF4231 PF14015.6 ORF62854 - 0.075 13.5 0.1 0.11 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) Yip1 PF04893.17 ORF62854 - 0.19 11.4 9.4 0.29 10.9 9.3 1.5 1 1 0 1 1 1 0 Yip1 domain DUF2997 PF11211.8 ORF62385 - 0.13 12.1 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) pP_pnuc_1 PF18165.1 ORF61595 - 0.079 12.9 0.0 0.094 12.6 0.0 1.1 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease CEBP1_N PF16368.5 ORF61595 - 0.1 12.1 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein 1 N-terminus Oest_recep PF02159.15 ORF61313 - 0.13 12.7 0.1 0.16 12.4 0.1 1.2 1 0 0 1 1 1 0 Oestrogen receptor DUF4752 PF15944.5 ORF61111 - 1e-35 121.6 0.8 1.3e-35 121.3 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4752) Robl_LC7 PF03259.17 ORF59839 - 4.5e-15 55.2 0.0 5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain UL17 PF17640.2 ORF59556 - 0.0094 15.9 1.0 0.012 15.6 1.0 1.2 1 0 0 1 1 1 1 Uncharacterized UL17 Lung_7-TM_R PF06814.13 ORF59540 - 0.021 14.1 5.2 0.024 13.9 5.2 1.1 1 0 0 1 1 1 0 Lung seven transmembrane receptor EF-hand_1 PF00036.32 ORF59143 - 6.7e-14 50.3 0.1 6.4e-06 25.4 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF59143 - 6.1e-12 44.5 0.2 5.3e-05 22.8 0.0 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF59143 - 4.4e-11 43.1 0.0 6.1e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF59143 - 1.3e-10 40.3 0.1 7.6e-05 22.0 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF59143 - 3.5e-08 33.2 0.6 4.5e-06 26.4 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair DUF674 PF05056.12 ORF59143 - 0.031 13.2 0.3 0.032 13.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) EF-hand_4 PF12763.7 ORF59143 - 0.041 13.8 1.3 0.33 10.9 0.1 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Cdc6_C PF09079.11 ORF59143 - 0.12 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain NIF PF03031.18 ORF58956 - 4.5e-38 130.5 0.2 4.9e-38 130.3 0.2 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF2997 PF11211.8 ORF57303 - 0.13 12.1 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) OEP PF02321.18 ORF5718 - 0.064 13.1 1.4 0.084 12.7 1.4 1.2 1 0 0 1 1 1 0 Outer membrane efflux protein T2SSppdC PF12528.8 ORF5705 - 4e-25 88.4 4.3 5.1e-25 88.0 4.3 1.1 1 0 0 1 1 1 1 Type II secretion prepilin peptidase dependent protein C N_methyl PF07963.12 ORF5705 - 5.7e-07 28.8 0.4 1.1e-06 27.9 0.4 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif DUF1494 PF07379.11 ORF5705 - 0.025 14.4 0.0 0.033 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1494) Coa1 PF08695.10 ORF5705 - 0.061 13.1 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 Phospholamban PF04272.14 ORF56518 - 0.21 11.1 1.0 0.4 10.2 1.0 1.4 1 0 0 1 1 1 0 Phospholamban CENP-T_C PF15511.6 ORF54789 - 8.4e-09 35.5 0.1 1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF54789 - 3.5e-05 24.0 0.1 0.0001 22.5 0.0 1.8 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF54789 - 3.9e-05 23.7 0.1 5.7e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 ORF54789 - 7.1e-05 23.1 0.1 0.0001 22.6 0.1 1.4 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 ORF54789 - 0.00042 20.7 0.1 0.00051 20.4 0.1 1.2 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 ORF54789 - 0.0066 16.5 0.0 0.0086 16.1 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF54789 - 0.16 12.5 0.1 0.23 12.0 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Gmx_para_CXXCG PF09535.10 ORF54020 - 0.063 12.5 0.5 0.079 12.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) CCP_MauG PF03150.14 ORF54020 - 0.15 12.7 1.1 0.21 12.2 1.1 1.1 1 0 0 1 1 1 0 Di-haem cytochrome c peroxidase TerC PF03741.16 ORF53669 - 1e-11 44.8 4.9 1e-11 44.8 4.9 1.3 2 0 0 2 2 2 1 Integral membrane protein TerC family TraQ PF09679.10 ORF53669 - 0.11 12.4 2.1 0.98 9.4 1.2 2.0 1 1 1 2 2 2 0 Type-F conjugative transfer system pilin chaperone (TraQ) zf-BED PF02892.15 ORF53583 - 0.069 13.2 3.4 0.092 12.8 1.2 2.3 2 0 0 2 2 2 0 BED zinc finger APG6_N PF17675.1 ORF53521 - 0.0074 16.8 1.5 0.028 15.0 0.4 1.9 2 0 0 2 2 2 1 Apg6 coiled-coil region GGA_N-GAT PF18308.1 ORF53521 - 0.015 14.9 0.3 0.034 13.8 0.3 1.6 1 0 0 1 1 1 0 GGA N-GAT domain DUF327 PF03885.13 ORF53521 - 0.016 15.2 0.2 0.024 14.6 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF327) Fez1 PF06818.15 ORF53521 - 0.024 15.1 1.1 0.031 14.7 1.1 1.2 1 0 0 1 1 1 0 Fez1 Latarcin PF10279.9 ORF53521 - 0.03 14.7 0.4 0.32 11.4 0.2 2.0 2 0 0 2 2 2 0 Latarcin precursor DUF3502 PF12010.8 ORF53521 - 0.071 13.8 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) DUF4315 PF14193.6 ORF53521 - 0.082 12.9 0.8 0.082 12.9 0.8 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4315) DivIC PF04977.15 ORF53521 - 0.19 11.5 3.9 1.1 9.0 1.0 2.7 2 1 0 2 2 2 0 Septum formation initiator Ax_dynein_light PF10211.9 ORF53371 - 1.7e-25 90.0 0.0 2e-25 89.8 0.0 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain PsbH PF00737.20 ORF52812 - 1.7e-06 27.6 1.1 2.8e-06 27.0 1.1 1.4 1 1 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 ORF52812 - 0.018 14.8 0.2 0.02 14.6 0.2 1.1 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF52812 - 0.034 14.6 0.0 0.052 13.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like TraD_N PF12615.8 ORF51577 - 0.078 13.7 0.2 0.092 13.5 0.2 1.1 1 0 0 1 1 1 0 F sex factor protein N terminal Nop10p PF04135.12 ORF5064 - 0.03 14.4 0.0 0.07 13.2 0.0 1.6 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family EIIBC-GUT_N PF03612.14 ORF50550 - 0.059 13.1 7.6 0.075 12.8 7.6 1.2 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus DUF4616 PF15394.6 ORF50550 - 0.059 12.3 5.6 0.061 12.3 5.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4616) Vfa1 PF08432.10 ORF50550 - 0.14 12.5 14.1 0.16 12.3 14.1 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Eapp_C PF10238.9 ORF50550 - 0.24 11.5 6.9 0.26 11.4 6.9 1.2 1 0 0 1 1 1 0 E2F-associated phosphoprotein DUF3464 PF11947.8 ORF50550 - 0.25 11.1 8.7 0.26 11.0 8.7 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 DUF4770 PF15994.5 ORF50550 - 0.34 11.1 8.1 0.35 11.1 8.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) FAM176 PF14851.6 ORF50550 - 0.35 10.5 5.1 0.39 10.4 5.1 1.2 1 0 0 1 1 1 0 FAM176 family Peptidase_S30 PF01577.16 ORF50550 - 0.36 10.4 14.4 0.39 10.3 14.4 1.0 1 0 0 1 1 1 0 Potyvirus P1 protease EMC3_TMCO1 PF01956.16 ORF50550 - 0.54 10.0 6.8 0.59 9.9 6.8 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF1003 PF06210.11 ORF50550 - 0.59 10.3 3.9 1.1 9.4 3.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) Rtf2 PF04641.12 ORF50550 - 0.62 9.4 14.7 0.69 9.2 14.7 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger Fmp27 PF10344.9 ORF50550 - 0.68 7.9 9.1 0.67 8.0 9.1 1.1 1 0 0 1 1 1 0 Mitochondrial protein from FMP27 RR_TM4-6 PF06459.12 ORF50550 - 0.76 9.6 12.6 0.79 9.5 12.6 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Sec62 PF03839.16 ORF50550 - 0.78 9.2 11.2 0.82 9.1 11.2 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Presenilin PF01080.17 ORF50550 - 0.87 8.3 7.8 0.84 8.3 7.8 1.1 1 0 0 1 1 1 0 Presenilin GCD14 PF08704.10 ORF50550 - 1.1 8.9 4.6 1.2 8.8 4.6 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DDHD PF02862.17 ORF50550 - 1.3 9.1 5.4 1.4 9.0 5.4 1.2 1 0 0 1 1 1 0 DDHD domain Connexin PF00029.19 ORF50550 - 1.4 8.6 8.9 1.5 8.5 8.9 1.1 1 0 0 1 1 1 0 Connexin FHIPEP PF00771.20 ORF50550 - 1.5 7.2 4.8 1.7 7.1 4.8 1.2 1 0 0 1 1 1 0 FHIPEP family TFB6 PF17110.5 ORF50550 - 1.7 8.4 7.6 2.5 7.8 7.6 1.2 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH NARP1 PF12569.8 ORF50550 - 1.7 7.4 14.9 1.6 7.5 14.9 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Atg14 PF10186.9 ORF50550 - 2.1 7.4 12.9 2.5 7.1 12.9 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2828 PF11443.8 ORF50550 - 2.4 6.1 10.5 2.3 6.2 10.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) Zip PF02535.22 ORF50550 - 2.6 7.2 4.1 2.7 7.1 4.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter PPL5 PF18168.1 ORF50550 - 2.7 7.2 7.6 2.5 7.3 7.6 1.1 1 0 0 1 1 1 0 Prim-pol family 5 V_ATPase_I PF01496.19 ORF50550 - 2.8 5.7 6.0 2.9 5.7 6.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Nckap1 PF09735.9 ORF50550 - 2.9 5.8 6.0 3.1 5.6 6.0 1.0 1 0 0 1 1 1 0 Membrane-associated apoptosis protein DUF3987 PF13148.6 ORF50550 - 2.9 6.8 8.6 2.7 6.9 8.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) NPR3 PF03666.13 ORF50550 - 2.9 6.6 9.6 2.7 6.7 9.6 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Pannexin_like PF12534.8 ORF50550 - 2.9 6.9 5.6 3.2 6.7 5.6 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 DUF4337 PF14235.6 ORF50550 - 3.7 7.6 8.8 3.9 7.6 8.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) CDC45 PF02724.14 ORF50550 - 3.7 5.7 10.8 3.6 5.8 10.8 1.1 1 0 0 1 1 1 0 CDC45-like protein O-antigen_lig PF13425.6 ORF50550 - 4 6.1 4.2 4 6.1 4.2 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein ALMT PF11744.8 ORF50550 - 4.1 6.1 7.2 3.9 6.2 7.2 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter MDM10 PF12519.8 ORF50550 - 4.1 6.2 8.0 4.3 6.1 8.0 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 Ureide_permease PF07168.11 ORF50550 - 4.8 5.8 6.0 5.5 5.6 6.0 1.1 1 0 0 1 1 1 0 Ureide permease GNAT_acetyltr_2 PF13718.6 ORF50550 - 5.1 6.4 8.0 6.9 6.0 8.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase 2 CLN3 PF02487.17 ORF50550 - 5.1 6.0 4.6 5.2 6.0 4.6 1.1 1 0 0 1 1 1 0 CLN3 protein U1snRNP70_N PF12220.8 ORF50550 - 6 7.6 16.9 8 7.2 15.7 1.8 2 0 0 2 2 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal OATP PF03137.20 ORF50550 - 6.7 4.9 5.6 6.8 4.9 5.6 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family ORC_WH_C PF18137.1 ORF50550 - 8.2 6.5 12.6 13 5.9 12.6 1.2 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal FaeA PF04703.12 ORF50499 - 0.14 12.5 0.3 12 6.4 0.0 2.9 3 0 0 3 3 3 0 FaeA-like protein Antimicrobial_5 PF08026.11 ORF50499 - 0.33 11.0 2.5 18 5.5 0.2 3.0 3 0 0 3 3 3 0 Bee antimicrobial peptide RCC1 PF00415.18 ORF50499 - 1 10.0 4.0 24 5.6 0.2 2.7 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat zf-RING_13 PF17977.1 ORF50499 - 1.1 9.5 20.8 5.4 7.2 3.2 3.1 1 1 2 3 3 3 0 RING/Ubox like zinc-binding domain DUF4020 PF13212.6 ORF4968 - 0.093 12.6 0.2 0.095 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4020) DUF1461 PF07314.11 ORF49261 - 0.0051 16.7 0.1 0.0058 16.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1461) Baculo_11_kDa PF06143.11 ORF49153 - 0.13 11.9 0.2 0.37 10.4 0.0 1.8 1 1 0 2 2 2 0 Baculovirus 11 kDa family EpsG PF14897.6 ORF48985 - 0.003 16.9 1.0 0.0033 16.8 1.0 1.0 1 0 0 1 1 1 1 EpsG family AA_permease PF00324.21 ORF485 - 5.3e-09 35.2 12.9 5.8e-09 35.1 12.9 1.0 1 0 0 1 1 1 1 Amino acid permease DUF3810 PF12725.7 ORF485 - 0.48 9.7 2.7 0.58 9.5 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DAGAT PF03982.13 ORF48237 - 3.6e-12 45.8 0.0 3.6e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 Diacylglycerol acyltransferase Cytochrom_C_asm PF01578.20 ORF47553 - 0.0024 17.6 0.0 0.0027 17.5 0.0 1.0 1 0 0 1 1 1 1 Cytochrome C assembly protein YajC PF02699.15 ORF47553 - 0.037 13.9 1.1 0.13 12.1 0.2 2.1 2 1 0 2 2 2 0 Preprotein translocase subunit 7tm_1 PF00001.21 ORF47553 - 0.15 11.4 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) PDR_CDR PF06422.12 ORF47553 - 2 8.3 3.5 0.84 9.6 0.9 1.7 1 1 1 2 2 2 0 CDR ABC transporter CENP-T_C PF15511.6 ORF46848 - 8.4e-09 35.5 0.1 1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF46848 - 3.5e-05 24.0 0.1 0.0001 22.5 0.0 1.8 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF46848 - 3.9e-05 23.7 0.1 5.7e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 ORF46848 - 7.1e-05 23.1 0.1 0.0001 22.6 0.1 1.4 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 ORF46848 - 0.00042 20.7 0.1 0.00051 20.4 0.1 1.2 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 ORF46848 - 0.0066 16.5 0.0 0.0086 16.1 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF46848 - 0.16 12.5 0.1 0.23 12.0 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A AA_permease PF00324.21 ORF46566 - 5.3e-09 35.2 12.9 5.8e-09 35.1 12.9 1.0 1 0 0 1 1 1 1 Amino acid permease DUF3810 PF12725.7 ORF46566 - 0.48 9.7 2.7 0.58 9.5 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Pkinase PF00069.25 ORF46486 - 6.2e-15 55.3 0.0 7.5e-15 55.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF46486 - 0.026 13.9 0.0 0.036 13.4 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Kelch_4 PF13418.6 ORF46486 - 0.2 11.7 0.1 1.6 8.8 0.0 2.0 2 0 0 2 2 2 0 Galactose oxidase, central domain SUI1 PF01253.22 ORF4605 - 9.4e-18 64.5 0.1 5.1e-17 62.2 0.1 1.9 1 1 0 1 1 1 1 Translation initiation factor SUI1 KAP PF05804.12 ORF45723 - 0.0029 15.9 0.3 0.0032 15.7 0.3 1.0 1 0 0 1 1 1 1 Kinesin-associated protein (KAP) DUF3384 PF11864.8 ORF45723 - 0.006 15.5 0.1 0.0062 15.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3384) HEAT_EZ PF13513.6 ORF45723 - 0.098 13.2 0.0 0.21 12.1 0.0 1.5 1 0 0 1 1 1 0 HEAT-like repeat FAM199X PF15814.5 ORF44809 - 0.0012 18.0 7.8 0.0014 17.8 7.8 1.0 1 0 0 1 1 1 1 Protein family FAM199X Diacid_rec PF05651.13 ORF44809 - 0.0074 16.0 0.2 0.0092 15.6 0.2 1.1 1 0 0 1 1 1 1 Putative sugar diacid recognition SpoIIIAH PF12685.7 ORF44809 - 0.37 10.6 6.6 0.45 10.3 6.6 1.1 1 0 0 1 1 1 0 SpoIIIAH-like protein Cgr1 PF03879.14 ORF44809 - 0.63 10.4 17.6 0.5 10.8 16.7 1.4 1 1 0 1 1 1 0 Cgr1 family TraV PF09676.10 ORF44809 - 8.9 7.3 10.5 4.4 8.3 8.4 1.5 1 1 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) Pal1 PF08316.11 ORF43331 - 0.015 16.1 0.5 0.019 15.8 0.5 1.1 1 0 0 1 1 1 0 Pal1 cell morphology protein Z1 PF10593.9 ORF43331 - 0.046 13.2 1.3 0.046 13.2 1.3 1.0 1 0 0 1 1 1 0 Z1 domain zf-LITAF-like PF10601.9 ORF42774 - 0.034 14.4 1.0 0.052 13.8 1.0 1.3 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Acetyltransf_11 PF13720.6 ORF42151 - 0.02 15.4 1.1 0.03 14.8 1.1 1.3 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Fe-S_biosyn PF01521.20 ORF41467 - 2.4e-26 92.1 0.0 2.7e-26 91.9 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis HlyIII PF03006.20 ORF39395 - 0.00012 21.8 1.2 0.00016 21.5 1.2 1.2 1 0 0 1 1 1 1 Haemolysin-III related NAD_binding_6 PF08030.12 ORF39299 - 2.1e-06 27.9 0.0 2.6e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 Ferric reductase NAD binding domain tRNA_anti_2 PF13742.6 ORF39299 - 0.051 13.8 0.0 0.11 12.7 0.0 1.6 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain zf-BED PF02892.15 ORF38878 - 0.069 13.2 3.4 0.092 12.8 1.2 2.3 2 0 0 2 2 2 0 BED zinc finger HlyD PF00529.20 ORF38790 - 2.4e-13 49.8 0.8 2.4e-13 49.8 0.8 1.7 2 0 0 2 2 2 1 HlyD membrane-fusion protein of T1SS PNP_UDP_1 PF01048.20 ORF3816 - 6.4e-08 32.1 0.0 7e-08 32.0 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily BAR_3 PF16746.5 ORF3816 - 0.015 15.1 0.0 0.017 14.9 0.0 1.0 1 0 0 1 1 1 0 BAR domain of APPL family DUF2997 PF11211.8 ORF37872 - 0.13 12.1 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) FAM180 PF15173.6 ORF36783 - 0.086 12.8 0.0 0.13 12.3 0.0 1.3 1 1 0 1 1 1 0 FAM180 family PHR PF08005.12 ORF32967 - 2e-05 25.3 0.0 2.7e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 PHR domain RGI_lyase PF18370.1 ORF32967 - 0.03 14.6 0.1 0.061 13.6 0.0 1.5 2 0 0 2 2 2 0 Rhamnogalacturonan I lyases beta-sheet domain EamA PF00892.20 ORF32884 - 6.8e-07 29.5 4.1 7.7e-07 29.4 4.1 1.1 1 0 0 1 1 1 1 EamA-like transporter family Pkinase PF00069.25 ORF32571 - 1.5e-25 90.1 0.3 1.7e-25 89.9 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF32571 - 6.5e-13 48.6 0.0 7.3e-13 48.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF32571 - 0.0094 15.9 0.0 0.0097 15.9 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF32571 - 0.012 15.0 0.1 0.018 14.4 0.1 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family PGA2 PF07543.12 ORF31330 - 0.033 14.2 1.9 0.04 13.9 1.9 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 Glyco_hydro_72 PF03198.14 ORF31264 - 0.0021 17.4 0.0 0.0026 17.1 0.0 1.1 1 0 0 1 1 1 1 Glucanosyltransferase Pkinase PF00069.25 ORF3091 - 5e-25 88.4 0.1 5.5e-25 88.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF3091 - 4.8e-09 35.9 0.0 5.4e-09 35.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF3091 - 0.00033 20.1 0.0 0.00039 19.8 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Choline_kinase PF01633.20 ORF3091 - 0.0011 18.6 0.6 0.0015 18.2 0.6 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase Kdo PF06293.14 ORF3091 - 0.036 13.4 0.0 0.044 13.1 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF3091 - 0.045 13.7 0.1 0.054 13.4 0.1 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Nudix_hydro PF18290.1 ORF28602 - 1.2e-21 76.5 0.3 1.4e-21 76.2 0.3 1.1 1 0 0 1 1 1 1 Nudix hydrolase domain DUF2884 PF11101.8 ORF28602 - 0.034 13.7 0.2 0.041 13.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) DUF4833 PF16117.5 ORF28193 - 0.09 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4833) GHD PF17834.1 ORF28175 - 0.0035 17.3 0.0 0.0048 16.9 0.0 1.1 1 0 0 1 1 1 1 Beta-sandwich domain in beta galactosidase PPR_2 PF13041.6 ORF27435 - 3.5e-05 23.9 0.0 5.7e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 PPR repeat family PPR_3 PF13812.6 ORF27435 - 9.2e-05 22.4 0.0 0.00012 22.1 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 ORF27435 - 0.00084 19.4 0.1 0.34 11.3 0.0 2.5 3 0 0 3 3 3 2 PPR repeat Organ_specific PF10950.8 ORF26669 - 0.027 15.2 0.7 0.029 15.1 0.7 1.2 1 0 0 1 1 1 0 Organ specific protein FidL_like PF15941.5 ORF26227 - 5.3 7.6 8.5 10 6.7 8.0 1.8 1 1 0 1 1 1 0 FidL-like putative membrane protein Ras PF00071.22 ORF25858 - 2.2e-06 27.4 0.2 2.8e-06 27.0 0.2 1.1 1 0 0 1 1 1 1 Ras family TrbI_Ftype PF09677.10 ORF25858 - 0.072 13.4 0.2 0.093 13.1 0.2 1.2 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) ASFV_J13L PF05568.11 ORF24815 - 0.11 12.2 0.3 0.14 11.9 0.3 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Asp PF00026.23 ORF24725 - 6.1e-09 35.7 0.1 8.1e-09 35.3 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF24725 - 0.00029 21.1 0.1 0.00046 20.5 0.1 1.3 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal MIT PF04212.18 ORF24702 - 0.25 11.5 1.4 1.8 8.7 0.2 2.6 2 1 1 3 3 3 0 MIT (microtubule interacting and transport) domain Homeobox_KN PF05920.11 ORF24642 - 0.001 19.0 0.7 0.0036 17.2 0.3 2.1 2 0 0 2 2 2 1 Homeobox KN domain KIND PF16474.5 ORF24642 - 0.066 13.1 0.5 0.087 12.7 0.4 1.3 1 1 0 1 1 1 0 Kinase non-catalytic C-lobe domain FtsL PF04999.13 ORF23836 - 0.036 14.1 1.4 0.036 14.1 1.4 1.7 2 0 0 2 2 2 0 Cell division protein FtsL DUF3347 PF11827.8 ORF23836 - 0.65 10.2 13.8 0.86 9.8 13.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3347) CDC45 PF02724.14 ORF23836 - 1 7.6 26.8 1.2 7.3 26.8 1.0 1 0 0 1 1 1 0 CDC45-like protein Tim54 PF11711.8 ORF23836 - 1.3 7.7 14.0 1.5 7.5 14.0 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 SpoIIIAH PF12685.7 ORF23836 - 2.1 8.1 23.3 2.5 7.9 23.3 1.0 1 0 0 1 1 1 0 SpoIIIAH-like protein Ribosomal_L37 PF08561.10 ORF23836 - 3.3 8.2 16.2 4.2 7.9 16.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L37 CobT PF06213.12 ORF23836 - 4.6 6.6 27.0 5 6.4 27.0 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT DNA_pol_phi PF04931.13 ORF23836 - 4.9 5.1 25.5 5.7 4.9 25.5 1.2 1 0 0 1 1 1 0 DNA polymerase phi TRAP_alpha PF03896.16 ORF23836 - 6.3 5.9 15.0 7.2 5.7 15.0 1.2 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit RR_TM4-6 PF06459.12 ORF23836 - 6.6 6.5 21.6 8.1 6.2 21.6 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 ALMT PF11744.8 ORF23836 - 9.1 5.0 13.0 11 4.7 13.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Presenilin PF01080.17 ORF23836 - 9.8 4.8 18.4 11 4.6 18.4 1.0 1 0 0 1 1 1 0 Presenilin Nop14 PF04147.12 ORF23836 - 9.9 4.2 28.4 12 4.0 28.4 1.1 1 0 0 1 1 1 0 Nop14-like family Poxvirus_B22R_C PF13168.6 ORF2331 - 0.023 14.2 0.0 0.028 13.9 0.0 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein C-terminal PTS-HPr PF00381.19 ORF2331 - 0.11 12.8 0.1 0.15 12.3 0.1 1.4 1 1 0 1 1 1 0 PTS HPr component phosphorylation site DUF3103 PF11301.8 ORF2309 - 0.11 11.3 0.0 0.13 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3103) C2 PF00168.30 ORF21892 - 0.00015 22.0 0.1 0.00017 21.8 0.1 1.1 1 0 0 1 1 1 1 C2 domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks221.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks221.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks221.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks221.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase PF00069.25 ORF20982 - 1e-33 116.9 3.4 1.1e-33 116.8 3.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF20982 - 7.3e-20 71.3 0.2 7.8e-20 71.2 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF20982 - 1.1e-05 24.9 0.0 1.3e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF20982 - 0.00037 20.5 0.0 0.0012 18.8 0.0 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF20982 - 0.0063 16.1 0.6 0.0076 15.9 0.6 1.2 1 1 0 1 1 1 1 Choline/ethanolamine kinase Pox_ser-thr_kin PF05445.11 ORF20982 - 0.017 14.1 2.4 0.024 13.6 0.5 1.8 1 1 1 2 2 2 0 Poxvirus serine/threonine protein kinase YrbL-PhoP_reg PF10707.9 ORF20982 - 0.061 12.8 0.2 0.1 12.1 0.1 1.4 1 1 0 1 1 1 0 PhoP regulatory network protein YrbL DnaJ PF00226.31 ORF1942 - 2.7e-10 40.2 0.1 4e-10 39.7 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain Ish1 PF10281.9 ORF1942 - 0.053 13.8 0.2 0.11 12.8 0.2 1.5 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein Robl_LC7 PF03259.17 ORF18758 - 4.5e-15 55.2 0.0 5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain SatRNA_48 PF17485.2 ORF18350 - 0.12 11.5 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Satellite RNA 48 kDa protein ANAPC1 PF12859.7 ORF1817 - 0.31 11.6 1.8 0.38 11.3 1.8 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 DUF3464 PF11947.8 ORF1817 - 1.7 8.4 5.6 2.2 8.0 5.6 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 FTCD_N PF07837.12 ORF17949 - 0.068 13.0 0.5 0.25 11.1 0.0 1.8 1 1 1 2 2 2 0 Formiminotransferase domain, N-terminal subdomain CX9C PF16860.5 ORF17869 - 0.00081 19.4 5.4 0.11 12.5 0.1 2.5 2 0 0 2 2 2 2 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Acetyltransf_1 PF00583.25 ORF17806 - 4.8e-08 33.2 0.0 5.8e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF17806 - 1.2e-07 32.1 0.0 1.5e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF17806 - 4.1e-07 30.0 0.0 5.1e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF17806 - 0.0017 18.3 0.0 0.0023 17.9 0.0 1.1 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 ORF17806 - 0.066 12.9 0.0 0.077 12.7 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ DUF3318 PF11780.8 ORF17806 - 0.096 12.6 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3318) SPATA25 PF15218.6 ORF17469 - 0.042 13.6 0.6 0.05 13.4 0.6 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 25 MORN PF02493.20 ORF17001 - 2.9 8.0 6.7 29 4.8 0.2 3.7 3 1 2 5 5 5 0 MORN repeat MORN PF02493.20 ORF1642 - 3.5e-13 48.6 12.0 0.00018 21.2 0.3 4.1 4 0 0 4 4 4 3 MORN repeat DUF3561 PF12084.8 ORF16142 - 1.7e-49 166.3 8.7 1.9e-49 166.1 8.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3561) DUF3054 PF11255.8 ORF16142 - 0.25 11.9 9.3 0.38 11.3 9.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3054) Peptidase_M61_N PF17899.1 ORF14741 - 0.24 11.4 0.0 0.3 11.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase M61 N-terminal domain PUNUT PF16913.5 ORF14288 - 1.3e-06 27.9 4.6 1.4e-06 27.8 4.6 1.0 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport EamA PF00892.20 ORF14288 - 7.5e-05 22.9 6.9 7.5e-05 22.9 6.9 2.1 2 0 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 ORF14288 - 0.00047 19.5 1.3 0.00048 19.4 1.3 1.0 1 0 0 1 1 1 1 UAA transporter family SLC35F PF06027.12 ORF14288 - 0.00086 18.9 0.9 0.00097 18.7 0.9 1.0 1 0 0 1 1 1 1 Solute carrier family 35 DUF647 PF04884.14 ORF14288 - 0.071 12.7 0.1 0.09 12.4 0.1 1.1 1 0 0 1 1 1 0 Vitamin B6 photo-protection and homoeostasis DUF2070 PF09843.9 ORF14288 - 0.077 11.3 5.1 0.082 11.2 5.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PHO4 PF01384.20 ORF14288 - 0.26 10.3 2.5 0.27 10.2 2.5 1.2 1 0 0 1 1 1 0 Phosphate transporter family DIT1_PvcA PF05141.12 ORF1387 - 0.027 13.9 2.6 0.032 13.7 2.6 1.0 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein PH_8 PF15409.6 ORF13673 - 4e-05 23.8 1.0 5.4e-05 23.4 1.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain PH PF00169.29 ORF13673 - 9.1e-05 22.9 0.5 0.00011 22.7 0.5 1.1 1 0 0 1 1 1 1 PH domain PH_3 PF14593.6 ORF13673 - 0.00093 19.3 1.6 0.0029 17.7 1.6 1.7 1 1 0 1 1 1 1 PH domain Rossmann-like PF10727.9 ORF13673 - 0.23 11.3 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 Rossmann-like domain DUF3948 PF13134.6 ORF12119 - 0.01 15.5 0.8 0.058 13.1 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3948) ANP PF00212.18 ORF12119 - 0.039 14.1 0.8 0.039 14.1 0.8 2.4 3 0 0 3 3 3 0 Atrial natriuretic peptide Ustilago_mating PF05722.12 ORF12055 - 0.7 9.4 7.0 0.83 9.1 7.0 1.1 1 0 0 1 1 1 0 Ustilago B locus mating-type protein Flavodoxin_NdrI PF07972.11 ORF11764 - 0.066 13.4 0.1 0.075 13.2 0.1 1.2 1 0 0 1 1 1 0 NrdI Flavodoxin like Aminotran_3 PF00202.21 ORF11745 - 0.0039 15.9 0.0 0.0044 15.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III tRNA_bind PF01588.20 ORF11295 - 0.032 14.4 0.1 0.044 13.9 0.1 1.3 1 0 0 1 1 1 0 Putative tRNA binding domain CENP-B_N PF04218.13 ORF112269 - 0.062 12.9 0.1 0.17 11.6 0.1 1.7 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Thioredoxin_6 PF13848.6 ORF112097 - 0.00052 20.0 0.8 0.00077 19.4 0.8 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain Peptidase_C2 PF00648.21 ORF111933 - 7.3e-05 21.9 0.0 7.3e-05 21.9 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease NIF PF03031.18 ORF111885 - 1.1e-08 35.1 0.0 1.3e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF2477 PF10631.9 ORF111261 - 0.021 15.5 3.0 0.023 15.4 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2477) Robl_LC7 PF03259.17 ORF110910 - 4.5e-15 55.2 0.0 5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain Ferritin PF00210.24 ORF110700 - 3.3e-23 82.2 1.0 4.9e-23 81.6 1.0 1.3 1 0 0 1 1 1 1 Ferritin-like domain DUF1241 PF06840.11 ORF110700 - 0.052 13.2 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) Baculo_FP PF03258.14 ORF110684 - 0.076 13.2 0.0 0.093 12.9 0.0 1.2 1 0 0 1 1 1 0 Baculovirus FP protein MatP_C PF17414.2 ORF110684 - 0.094 12.9 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 MatP C-terminal ribbon-helix-helix domain Thioredoxin PF00085.20 ORF110589 - 2.2e-24 85.4 0.1 2.6e-24 85.2 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF110589 - 3.9e-05 24.1 0.1 0.00014 22.2 0.1 1.8 1 1 0 1 1 1 1 Thioredoxin-like domain AhpC-TSA PF00578.21 ORF110589 - 0.0002 21.3 0.0 0.0003 20.7 0.0 1.3 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 ORF110589 - 0.00053 20.3 0.0 0.0014 18.9 0.0 1.8 1 1 1 2 2 2 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF110589 - 0.00084 18.8 0.0 0.00087 18.7 0.0 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Redoxin PF08534.10 ORF110589 - 0.0013 18.5 0.1 0.0021 17.8 0.1 1.4 1 1 0 1 1 1 1 Redoxin Thioredoxin_7 PF13899.6 ORF110589 - 0.011 15.8 0.1 0.018 15.2 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like Flagellin_IN PF07196.13 ORF110589 - 0.048 13.8 1.5 9.2 6.6 0.0 2.8 3 0 0 3 3 3 0 Flagellin hook IN motif Tiam_CC_Ex PF18385.1 ORF110458 - 0.0099 16.3 1.7 0.0099 16.3 1.7 1.6 1 1 1 2 2 2 1 T-lymphoma invasion and metastasis CC-Ex domain Cnn_1N PF07989.11 ORF110458 - 0.32 11.2 13.6 1.3 9.3 1.7 2.3 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 SOGA PF11365.8 ORF110458 - 0.39 11.9 13.9 0.084 14.0 6.4 2.1 1 1 1 2 2 2 0 Protein SOGA Atg14 PF10186.9 ORF110458 - 0.47 9.5 16.7 0.57 9.2 16.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Jnk-SapK_ap_N PF09744.9 ORF110458 - 1.7 8.8 16.6 3.7 7.8 16.6 1.5 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 YabA PF06156.13 ORF110458 - 1.8 9.3 14.6 2.7e+02 2.2 14.6 2.1 1 1 0 1 1 1 0 Initiation control protein YabA Uso1_p115_C PF04871.13 ORF110458 - 6.8 7.1 18.5 10 6.5 5.7 2.1 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region BPL_N PF09825.9 ORF110458 - 9.4 5.2 9.9 9.7 5.1 9.9 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal Homeobox_KN PF05920.11 ORF110225 - 0.0036 17.2 0.3 0.0036 17.2 0.3 2.0 3 0 0 3 3 3 1 Homeobox KN domain HTH_18 PF12833.7 ORF1102 - 1.1e-23 83.3 1.4 1.3e-23 83.0 1.4 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF1102 - 4.3e-19 68.1 0.2 1.1e-12 47.7 0.1 2.1 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_3 PF01381.22 ORF1102 - 0.11 12.5 0.0 2.4 8.3 0.0 2.5 2 1 1 3 3 3 0 Helix-turn-helix DUF4718 PF15842.5 ORF108628 - 0.24 11.2 8.6 0.26 11.1 8.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) TraX PF05857.11 ORF108400 - 0.027 14.6 3.8 0.03 14.4 3.8 1.0 1 0 0 1 1 1 0 TraX protein DUF1514 PF07438.11 ORF108400 - 0.15 11.9 1.6 0.25 11.2 0.0 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1514) Ribosomal_60s PF00428.19 ORF108205 - 0.043 14.4 0.4 0.066 13.8 0.4 1.3 1 0 0 1 1 1 0 60s Acidic ribosomal protein Hemagglutinin PF00509.18 ORF10778 - 0.0092 14.4 0.5 0.0098 14.3 0.5 1.0 1 0 0 1 1 1 1 Haemagglutinin Meiotic_rec114 PF03525.14 ORF10778 - 0.016 14.2 1.2 0.019 14.0 1.2 1.1 1 0 0 1 1 1 0 Meiotic recombination protein rec114 HSP70 PF00012.20 ORF107651 - 0.21 9.7 6.4 0.24 9.5 6.4 1.0 1 0 0 1 1 1 0 Hsp70 protein SpoVT_C PF15714.5 ORF106955 - 0.095 12.8 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Stage V sporulation protein T C-terminal, transcription factor GGDEF_2 PF17853.1 ORF106386 - 0.059 13.6 0.0 0.075 13.3 0.0 1.2 1 0 0 1 1 1 0 GGDEF-like domain CENP-T_C PF15511.6 ORF105881 - 8.4e-09 35.5 0.1 1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF105881 - 3.5e-05 24.0 0.1 0.0001 22.5 0.0 1.8 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF105881 - 3.9e-05 23.7 0.1 5.7e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 ORF105881 - 7.1e-05 23.1 0.1 0.0001 22.6 0.1 1.4 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 ORF105881 - 0.00042 20.7 0.1 0.00051 20.4 0.1 1.2 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 ORF105881 - 0.0066 16.5 0.0 0.0086 16.1 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF105881 - 0.16 12.5 0.1 0.23 12.0 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Transp_inhibit PF18791.1 ORF105482 - 0.09 12.3 0.1 0.2 11.2 0.1 1.5 1 0 0 1 1 1 0 Transport inhibitor response 1 protein domain DUF2834 PF11196.8 ORF105482 - 0.091 13.1 2.7 0.11 12.9 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2834) Cyt-b5 PF00173.28 ORF10461 - 5.8e-22 77.6 0.1 6.6e-22 77.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain UPF0149 PF03695.13 ORF104342 - 0.016 15.5 0.1 0.021 15.1 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0149) DUF3464 PF11947.8 ORF104319 - 0.15 11.8 0.1 0.17 11.6 0.1 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 MORN PF02493.20 ORF10366 - 1.5e-16 59.2 42.4 1.6e-05 24.5 4.7 5.1 5 0 0 5 5 5 5 MORN repeat Sugar_tr PF00083.24 ORF103402 - 6.8e-14 51.6 2.1 6.8e-14 51.6 2.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter CsoSCA PF08936.10 ORF103374 - 0.042 12.5 0.0 0.043 12.5 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase JmjN PF02375.17 ORF103374 - 0.09 12.8 0.4 0.17 11.9 0.4 1.6 1 0 0 1 1 1 0 jmjN domain Metal_resist PF13801.6 ORF10294 - 0.016 15.4 4.2 0.019 15.1 4.2 1.1 1 0 0 1 1 1 0 Heavy-metal resistance SR-25 PF10500.9 ORF10294 - 0.02 14.5 10.4 0.022 14.4 10.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CENP-H PF05837.12 ORF10294 - 0.4 11.1 8.5 1 9.8 8.5 1.7 1 1 0 1 1 1 0 Centromere protein H (CENP-H) FLYWCH_u PF16662.5 ORF102285 - 0.05 13.6 0.2 0.11 12.5 0.2 1.6 1 0 0 1 1 1 0 FLYWCH-type zinc finger-containing protein 1 EF-hand_1 PF00036.32 ORF101679 - 1.1e-07 30.9 0.6 0.0027 17.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF101679 - 8.6e-07 29.3 0.6 1.5e-06 28.6 0.6 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF101679 - 1.9e-05 24.2 3.8 0.0057 16.5 0.0 2.7 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF101679 - 0.00095 19.0 0.1 0.44 10.4 0.1 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF101679 - 0.025 14.5 1.3 0.05 13.6 0.3 1.8 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_5 PF13202.6 ORF101679 - 0.12 11.9 0.8 6.5 6.4 0.0 2.6 2 1 0 2 2 2 0 EF hand Seryl_tRNA_N PF02403.22 ORF101470 - 0.01 16.1 0.3 0.014 15.6 0.3 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF1499 PF07386.11 ORF101283 - 1.5e-08 35.2 0.0 1.8e-08 34.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) DUF4811 PF16069.5 ORF10026 - 0.02 14.8 0.2 0.024 14.5 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) DUF5544 PF17698.1 NODE_54960_length_316_cov_1.583630_g47027_i0forward_frame_1 - 0.06 13.4 0.1 0.087 12.9 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5544) DUF2890 PF11081.8 NODE_54954_length_316_cov_1.718861_g47021_i0reverse_frame_1 - 0.22 11.6 0.1 0.25 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) DUF4769 PF15992.5 NODE_54945_length_316_cov_2.131673_g47012_i0forward_frame_1 - 0.43 10.3 2.6 0.49 10.2 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) PTPRCAP PF15713.5 NODE_54945_length_316_cov_2.131673_g47012_i0forward_frame_1 - 8 6.7 11.0 9.9 6.4 11.0 1.1 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Pox_P21 PF05313.12 NODE_54944_length_316_cov_2.145907_g47011_i0forward_frame_1 - 0.044 13.4 0.3 0.053 13.1 0.3 1.0 1 0 0 1 1 1 0 Poxvirus P21 membrane protein ARF7EP_C PF14949.6 NODE_54937_length_316_cov_2.512456_g47004_i0reverse_frame_1 - 0.055 14.1 0.1 0.073 13.7 0.1 1.3 1 0 0 1 1 1 0 ARF7 effector protein C-terminus Chorion_1 PF01723.16 NODE_54936_length_316_cov_2.512456_g47003_i0forward_frame_1 - 0.21 11.5 9.9 0.036 14.0 5.0 1.9 1 1 1 2 2 2 0 Chorion protein Lamprin PF06403.11 NODE_54936_length_316_cov_2.512456_g47003_i0forward_frame_1 - 4.9 7.1 21.4 2e+02 1.9 21.4 2.6 1 1 0 1 1 1 0 Lamprin MFS_1 PF07690.16 NODE_54934_length_316_cov_2.693950_g47001_i0reverse_frame_1 - 8.5e-08 31.5 2.5 9.5e-08 31.3 2.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1430 PF07242.11 NODE_54934_length_316_cov_2.693950_g47001_i0reverse_frame_1 - 0.017 15.4 0.7 0.024 14.9 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) DUF4079 PF13301.6 NODE_54934_length_316_cov_2.693950_g47001_i0reverse_frame_1 - 0.042 14.0 0.1 0.052 13.7 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) ELH PF02323.15 NODE_54923_length_316_cov_4.106762_g46990_i0forward_frame_1 - 0.08 12.3 0.9 0.31 10.4 0.0 1.9 2 0 0 2 2 2 0 Egg-laying hormone precursor ABC_tran PF00005.27 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 4.8e-07 30.4 0.2 6.3e-07 30.0 0.2 1.3 1 1 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.0037 17.7 0.0 0.0043 17.4 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.0052 16.5 0.0 0.0075 16.0 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.0077 16.1 0.0 0.008 16.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.0095 16.2 0.0 0.011 16.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.019 15.1 0.1 0.024 14.7 0.1 1.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase cobW PF02492.19 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.025 14.2 0.1 0.033 13.8 0.1 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.026 15.0 0.2 0.046 14.2 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.03 14.5 0.0 0.037 14.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.036 13.1 0.1 0.043 12.9 0.1 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein Spore_IV_A PF09547.10 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.045 12.7 0.0 0.054 12.4 0.0 1.1 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) Dynamin_N PF00350.23 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.072 13.1 0.3 0.095 12.7 0.2 1.4 1 1 0 1 1 1 0 Dynamin family AAA_7 PF12775.7 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.076 12.5 0.0 0.091 12.3 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Adeno_IVa2 PF02456.15 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.082 11.7 0.0 0.087 11.6 0.0 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein Viral_helicase1 PF01443.18 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NACHT PF05729.12 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.16 11.9 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 NACHT domain RsgA_GTPase PF03193.16 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.16 11.9 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.17 11.9 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.18 11.7 0.0 0.22 11.4 0.0 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_14 PF13173.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.2 11.7 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.22 11.3 0.1 0.3 10.8 0.1 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein KdpC PF02669.15 NODE_54914_length_316_cov_50.633452_g46981_i0reverse_frame_1 - 0.056 13.3 0.2 0.085 12.7 0.2 1.3 1 0 0 1 1 1 0 K+-transporting ATPase, c chain TraG_N PF07916.11 NODE_54912_length_316_cov_54.451957_g46979_i0forward_frame_1 - 0.051 12.4 3.6 0.071 12.0 3.6 1.2 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF2992 PF11208.8 NODE_54909_length_316_cov_57.807829_g46976_i0reverse_frame_1 - 9.2 6.5 19.0 14 5.9 18.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2992) SRTM1 PF15872.5 NODE_54891_length_316_cov_98.569395_g46958_i0reverse_frame_1 - 3.4 7.8 5.3 4.7 7.4 5.3 1.4 1 1 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 Glyco_tran_WbsX PF14307.6 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_1 - 0.053 13.0 3.3 0.06 12.8 3.3 1.0 1 0 0 1 1 1 0 Glycosyltransferase WbsX Fer2 PF00111.27 NODE_54873_length_316_cov_7086.049822_g46941_i0reverse_frame_1 - 3.2e-05 23.8 1.1 3.4e-05 23.7 0.1 1.6 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain DUF502 PF04367.13 NODE_54867_length_317_cov_1.234043_g46935_i0reverse_frame_1 - 0.039 13.8 0.0 0.05 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF502) Ntox46 PF15538.6 NODE_54865_length_317_cov_1.273050_g46933_i0reverse_frame_1 - 0.011 15.7 0.1 0.013 15.5 0.1 1.2 1 0 0 1 1 1 0 Bacterial toxin 46 Cnd3 PF12719.7 NODE_54863_length_317_cov_1.333333_g46931_i0reverse_frame_1 - 0.072 12.3 0.0 0.085 12.0 0.0 1.1 1 0 0 1 1 1 0 Nuclear condensing complex subunits, C-term domain DUF2180 PF09947.9 NODE_54863_length_317_cov_1.333333_g46931_i0forward_frame_1 - 0.0064 16.4 1.3 0.03 14.3 1.3 1.9 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) DUF1712 PF08217.11 NODE_54861_length_317_cov_1.418440_g46929_i0forward_frame_1 - 0.0055 15.2 2.6 0.0065 15.0 2.6 1.0 1 0 0 1 1 1 1 Fungal domain of unknown function (DUF1712) Phage_Nu1 PF07471.12 NODE_54859_length_317_cov_1.475177_g46927_i0forward_frame_1 - 0.13 12.0 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Phage DNA packaging protein Nu1 DUF2433 PF10360.9 NODE_54847_length_317_cov_1.794326_g46915_i0reverse_frame_1 - 0.004 17.2 0.1 0.0047 17.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2433) OTU PF02338.19 NODE_54844_length_317_cov_2.003546_g46912_i0reverse_frame_1 - 0.012 16.1 0.0 0.019 15.4 0.0 1.4 1 1 0 1 1 1 0 OTU-like cysteine protease FG-GAP PF01839.23 NODE_54835_length_317_cov_2.258865_g46903_i0reverse_frame_1 - 0.14 12.3 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 FG-GAP repeat PSI PF01437.25 NODE_54835_length_317_cov_2.258865_g46903_i0forward_frame_1 - 0.78 10.3 7.9 0.35 11.5 5.3 1.8 2 0 0 2 2 2 0 Plexin repeat MobL PF18555.1 NODE_54827_length_317_cov_2.609929_g46895_i0forward_frame_1 - 0.00086 18.7 5.3 0.00095 18.5 5.3 1.0 1 0 0 1 1 1 1 MobL relaxases DUF3958 PF13125.6 NODE_54827_length_317_cov_2.609929_g46895_i0forward_frame_1 - 0.026 14.7 1.7 0.034 14.4 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) Calx-beta PF03160.14 NODE_54826_length_317_cov_2.716312_g46894_i0reverse_frame_1 - 6e-14 52.0 0.2 7.2e-14 51.8 0.2 1.1 1 0 0 1 1 1 1 Calx-beta domain TraB PF01963.17 NODE_54821_length_317_cov_3.127660_g46889_i0forward_frame_1 - 8e-15 55.4 0.0 9.1e-15 55.3 0.0 1.0 1 0 0 1 1 1 1 TraB family DUF2271 PF10029.9 NODE_54821_length_317_cov_3.127660_g46889_i0forward_frame_1 - 0.028 14.1 0.0 0.065 12.9 0.0 1.6 1 1 0 1 1 1 0 Predicted periplasmic protein (DUF2271) Hydrolase_4 PF12146.8 NODE_54821_length_317_cov_3.127660_g46889_i0forward_frame_1 - 0.14 11.4 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Serine aminopeptidase, S33 RED_N PF07808.13 NODE_54819_length_317_cov_3.429078_g46887_i0reverse_frame_1 - 0.01 15.4 0.2 0.012 15.2 0.2 1.0 1 0 0 1 1 1 0 RED-like protein N-terminal region RTX PF02382.15 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.02 14.6 0.4 0.022 14.4 0.4 1.1 1 0 0 1 1 1 0 N-terminal domain in RTX protein Cnn_1N PF07989.11 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.037 14.2 3.0 0.098 12.8 3.0 1.9 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF2087 PF09860.9 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.05 13.8 0.2 0.076 13.2 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) bZIP_2 PF07716.15 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.12 12.5 0.7 0.12 12.5 0.7 1.8 2 0 0 2 2 2 0 Basic region leucine zipper DUF4250 PF14056.6 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.35 10.9 3.8 2.3 8.2 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) YabA PF06156.13 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.39 11.4 4.0 0.59 10.8 0.7 2.0 1 1 1 2 2 2 0 Initiation control protein YabA DAO PF01266.24 NODE_54811_length_317_cov_5.187943_g46880_i0forward_frame_1 - 7.3e-06 25.8 0.0 8e-06 25.7 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Chi-conotoxin PF16981.5 NODE_54808_length_317_cov_30.709220_g46877_i0forward_frame_1 - 0.089 13.0 0.4 0.089 13.0 0.4 1.5 2 0 0 2 2 2 0 chi-Conotoxin or t superfamily VGCC_beta4Aa_N PF12052.8 NODE_54805_length_317_cov_43.829787_g46874_i0reverse_frame_1 - 0.019 15.1 9.9 0.043 13.9 5.8 2.5 2 0 0 2 2 2 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal TATR PF03430.13 NODE_54804_length_317_cov_46.684397_g46873_i0forward_frame_1 - 0.25 9.7 1.0 0.25 9.7 1.0 1.1 1 0 0 1 1 1 0 Trans-activating transcriptional regulator CMS1 PF14617.6 NODE_54796_length_317_cov_70.758865_g46865_i0reverse_frame_1 - 0.02 14.2 0.1 0.024 14.0 0.1 1.1 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit FapA PF03961.13 NODE_54796_length_317_cov_70.758865_g46865_i0reverse_frame_1 - 0.2 10.2 4.0 0.22 10.1 4.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF485 PF04341.12 NODE_54796_length_317_cov_70.758865_g46865_i0forward_frame_1 - 0.089 12.7 0.2 0.089 12.7 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function, DUF485 FAM216B PF15107.6 NODE_54791_length_317_cov_83.297872_g46860_i0reverse_frame_1 - 0.031 14.1 0.5 0.051 13.4 0.5 1.4 1 0 0 1 1 1 0 FAM216B protein family FlhC PF05280.11 NODE_54791_length_317_cov_83.297872_g46860_i0forward_frame_1 - 0.04 13.6 0.1 0.061 13.0 0.1 1.3 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhC) SseC PF04888.12 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.011 15.4 5.6 0.011 15.4 5.6 1.8 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family Nup88 PF10168.9 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.018 12.9 12.1 0.021 12.7 12.1 1.0 1 0 0 1 1 1 0 Nuclear pore component Sec2p PF06428.11 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.018 15.0 16.5 0.023 14.6 5.1 2.1 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p DUF745 PF05335.13 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.02 14.6 6.9 0.023 14.4 6.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) HemX PF04375.14 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.043 13.1 8.7 0.052 12.8 8.7 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Csm1_N PF18504.1 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.047 14.0 4.8 0.047 14.0 4.8 2.2 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF3450 PF11932.8 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.054 12.8 11.7 0.036 13.4 4.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) BST2 PF16716.5 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.054 14.1 11.0 0.064 13.8 11.0 1.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 OmpH PF03938.14 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.078 13.3 14.9 0.097 13.0 14.9 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) PSRP-3_Ycf65 PF04839.13 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.083 13.1 1.5 0.083 13.1 1.5 2.1 2 1 0 2 2 2 0 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) CEP209_CC5 PF16574.5 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.097 12.8 14.2 0.15 12.2 14.2 1.3 1 1 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 DUF2780 PF11075.8 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.13 12.4 5.5 0.18 11.9 5.5 1.2 1 0 0 1 1 1 0 Protein of unknown function VcgC/VcgE (DUF2780) DUF4404 PF14357.6 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.14 12.8 7.6 0.3 11.7 0.2 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4404) DUF4515 PF14988.6 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.15 11.8 18.1 0.24 11.2 18.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4515) FlgM PF04316.13 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.2 12.0 5.2 6.2 7.3 0.1 2.2 2 0 0 2 2 2 0 Anti-sigma-28 factor, FlgM DUF1664 PF07889.12 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.21 11.6 10.3 2 8.4 6.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Fmp27_WPPW PF10359.9 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.23 10.3 11.3 0.25 10.1 11.3 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Noelin-1 PF12308.8 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.23 11.4 5.1 0.32 11.0 5.0 1.3 1 1 0 1 1 1 0 Neurogenesis glycoprotein Rotamase PF00639.21 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.25 12.3 5.6 0.43 11.6 5.6 1.5 1 1 0 1 1 1 0 PPIC-type PPIASE domain FTCD_C PF04961.12 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.39 10.5 5.2 0.46 10.2 5.2 1.1 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase TMPIT PF07851.13 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.6 9.3 11.9 0.74 9.0 11.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein Exonuc_VII_L PF02601.15 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.66 9.5 6.5 0.74 9.3 6.5 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit CENP-H PF05837.12 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.7 10.3 10.3 0.89 10.0 10.3 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF4795 PF16043.5 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.76 9.3 15.1 3.3 7.3 15.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Fib_alpha PF08702.10 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.81 9.9 12.1 2.2 8.5 12.1 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Atg14 PF10186.9 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 1.7 7.6 11.0 2 7.4 11.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF730 PF05325.11 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 2.7 8.0 9.8 0.23 11.5 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF730) USP8_interact PF08941.10 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 6.6 6.5 8.6 17 5.1 7.8 1.8 1 1 1 2 2 2 0 USP8 interacting IGFL PF14653.6 NODE_54777_length_317_cov_255.269504_g46846_i0reverse_frame_1 - 0.056 13.4 3.9 0.068 13.1 3.9 1.3 1 0 0 1 1 1 0 Insulin growth factor-like family DUF2207 PF09972.9 NODE_54768_length_317_cov_12721.968085_g46837_i0reverse_frame_1 - 1.8 7.2 8.4 2 7.1 8.4 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF334 PF03904.13 NODE_54768_length_317_cov_12721.968085_g46837_i0reverse_frame_1 - 9.7 5.7 8.1 12 5.4 8.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) PriCT_1 PF08708.11 NODE_54763_length_318_cov_1.321555_g46832_i0forward_frame_1 - 0.037 13.7 0.2 0.16 11.7 0.1 1.9 2 0 0 2 2 2 0 Primase C terminal 1 (PriCT-1) Arrestin_N PF00339.29 NODE_54762_length_318_cov_1.406360_g46831_i0forward_frame_1 - 0.0002 21.5 0.0 0.00025 21.1 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain TRP PF06011.12 NODE_54761_length_318_cov_1.445230_g46830_i0reverse_frame_1 - 7.1e-05 21.7 1.9 8.9e-05 21.4 1.9 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF5409 PF17421.2 NODE_54761_length_318_cov_1.445230_g46830_i0reverse_frame_1 - 0.73 10.6 5.2 0.52 11.1 3.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5409) Phageshock_PspD PF09584.10 NODE_54759_length_318_cov_1.614841_g46828_i0forward_frame_1 - 4e-22 78.0 2.6 5.5e-22 77.6 2.6 1.2 1 0 0 1 1 1 1 Phage shock protein PspD (Phageshock_PspD) Phosphorylase PF00343.20 NODE_54757_length_318_cov_1.777385_g46826_i0reverse_frame_1 - 3.3e-31 108.3 0.0 3.6e-31 108.2 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase FGase PF05013.12 NODE_54745_length_318_cov_2.102473_g46814_i0reverse_frame_1 - 0.052 13.8 0.0 0.063 13.5 0.0 1.1 1 0 0 1 1 1 0 N-formylglutamate amidohydrolase Ephrin_rec_like PF07699.13 NODE_54742_length_318_cov_2.243816_g46811_i0forward_frame_1 - 4.9e-10 39.0 18.9 0.00041 20.0 6.7 3.1 2 1 1 3 3 3 3 Putative ephrin-receptor like NCD3G PF07562.14 NODE_54742_length_318_cov_2.243816_g46811_i0forward_frame_1 - 6.8e-05 22.8 6.0 0.021 14.8 1.7 2.4 2 0 0 2 2 2 2 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_54742_length_318_cov_2.243816_g46811_i0forward_frame_1 - 0.0067 16.8 9.9 3 8.3 0.2 4.0 3 1 0 3 3 3 2 TNFR/NGFR cysteine-rich region VSP PF03302.13 NODE_54742_length_318_cov_2.243816_g46811_i0forward_frame_1 - 0.21 10.4 20.6 0.4 9.5 10.0 2.0 1 1 1 2 2 2 0 Giardia variant-specific surface protein LcnG-beta PF11632.8 NODE_54742_length_318_cov_2.243816_g46811_i0forward_frame_1 - 0.26 11.3 0.1 6.2 6.9 0.0 2.5 3 0 0 3 3 3 0 Lactococcin G-beta HTH_AraC PF00165.23 NODE_54737_length_318_cov_2.604240_g46806_i0forward_frame_1 - 9.8e-10 38.3 0.0 1.4e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 NODE_54737_length_318_cov_2.604240_g46806_i0forward_frame_1 - 1.2e-05 25.5 0.1 2e-05 24.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain B277 PF17623.2 NODE_54736_length_318_cov_2.660777_g46805_i0reverse_frame_1 - 0.039 13.0 0.8 0.042 12.9 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function Zn_ribbon_SprT PF17283.2 NODE_54733_length_318_cov_2.766784_g46802_i0forward_frame_1 - 0.59 10.1 7.3 0.37 10.7 4.8 1.9 2 0 0 2 2 2 0 SprT-like zinc ribbon domain TK PF00265.18 NODE_54732_length_318_cov_2.826855_g46801_i0reverse_frame_1 - 0.12 12.2 0.1 0.23 11.3 0.0 1.5 2 0 0 2 2 2 0 Thymidine kinase DUF2701 PF10857.8 NODE_54728_length_318_cov_3.162544_g46797_i0forward_frame_1 - 0.16 12.0 1.6 1.6 8.8 0.7 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2701) FA_synthesis PF02504.15 NODE_54724_length_318_cov_3.279152_g46793_i0forward_frame_1 - 5.6e-31 107.8 0.0 6e-31 107.7 0.0 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein DUF2951 PF11166.8 NODE_54720_length_318_cov_4.409894_g46789_i0reverse_frame_1 - 1.5 9.1 6.9 1.6 9.0 6.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2951) ISK_Channel PF02060.15 NODE_54720_length_318_cov_4.409894_g46789_i0forward_frame_1 - 1.6 8.5 4.6 2.1 8.1 4.6 1.3 1 0 0 1 1 1 0 Slow voltage-gated potassium channel EGF_MSP1_1 PF12946.7 NODE_54712_length_318_cov_45.070671_g46781_i0reverse_frame_1 - 0.037 14.1 0.1 0.06 13.4 0.1 1.3 1 0 0 1 1 1 0 MSP1 EGF domain 1 Auxin_canalis PF05703.11 NODE_54708_length_318_cov_54.240283_g46777_i0forward_frame_1 - 0.67 9.8 4.6 0.73 9.7 4.6 1.0 1 0 0 1 1 1 0 Auxin canalisation Phage_HK97_TLTM PF06120.11 NODE_54707_length_318_cov_54.452297_g46776_i0reverse_frame_1 - 0.019 14.2 0.3 0.021 14.0 0.3 1.2 1 0 0 1 1 1 0 Tail length tape measure protein Arc_PepC_II PF06847.11 NODE_54707_length_318_cov_54.452297_g46776_i0reverse_frame_1 - 0.062 13.8 0.1 0.076 13.5 0.1 1.2 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II CLU_N PF15044.6 NODE_54695_length_318_cov_71.713781_g46764_i0reverse_frame_1 - 0.05 14.0 0.2 0.071 13.5 0.2 1.3 1 0 0 1 1 1 0 Mitochondrial function, CLU-N-term PanZ PF12568.8 NODE_54686_length_318_cov_93.890459_g46755_i0reverse_frame_1 - 0.12 12.1 0.7 0.25 11.1 0.7 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Reoviridae_Vp9 PF08978.10 NODE_54685_length_318_cov_106.985866_g46754_i0reverse_frame_1 - 0.12 11.6 0.5 0.14 11.3 0.5 1.1 1 0 0 1 1 1 0 Reoviridae VP9 OrgA_MxiK PF09482.10 NODE_54679_length_318_cov_136.484099_g46748_i0reverse_frame_1 - 0.0019 18.1 0.1 0.0023 17.8 0.1 1.1 1 0 0 1 1 1 1 Bacterial type III secretion apparatus protein (OrgA_MxiK) IPT PF01745.16 NODE_54674_length_318_cov_198.681979_g46743_i0forward_frame_1 - 0.041 13.3 0.0 0.049 13.0 0.0 1.1 1 0 0 1 1 1 0 Isopentenyl transferase Ank_2 PF12796.7 NODE_54671_length_318_cov_335.526502_g46740_i0forward_frame_1 - 1.2e-07 32.2 0.0 1.5e-07 31.9 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_54671_length_318_cov_335.526502_g46740_i0forward_frame_1 - 5.1e-05 23.7 0.0 0.014 16.0 0.0 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_54671_length_318_cov_335.526502_g46740_i0forward_frame_1 - 0.0011 19.3 0.0 0.15 12.7 0.0 3.2 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 NODE_54671_length_318_cov_335.526502_g46740_i0forward_frame_1 - 0.013 15.8 0.0 0.17 12.3 0.0 2.6 1 1 2 3 3 3 0 Ankyrin repeats (many copies) Ank PF00023.30 NODE_54671_length_318_cov_335.526502_g46740_i0forward_frame_1 - 0.015 15.7 0.0 1.7 9.2 0.0 2.9 3 0 0 3 3 3 0 Ankyrin repeat Ammonium_transp PF00909.21 NODE_54666_length_318_cov_5598.385159_g46735_i0reverse_frame_1 - 2.4e-07 29.8 0.0 3.4e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 Ammonium Transporter Family DHHC PF01529.20 NODE_54662_length_319_cov_1.288732_g46731_i0forward_frame_2 - 1.6e-20 73.6 5.8 1.6e-20 73.6 5.8 1.9 2 0 0 2 2 2 1 DHHC palmitoyltransferase HILPDA PF15220.6 NODE_54660_length_319_cov_1.419014_g46729_i0forward_frame_3 - 0.14 12.3 0.2 0.25 11.5 0.1 1.5 2 0 0 2 2 2 0 Hypoxia-inducible lipid droplet-associated Gtr1_RagA PF04670.12 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 4e-19 68.9 0.1 4.1e-19 68.9 0.1 1.0 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 5.7e-06 26.0 0.1 6.7e-06 25.8 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 1.1e-05 25.0 0.0 1.2e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 0.0019 18.2 0.0 0.0032 17.5 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 0.019 15.2 0.0 0.021 15.0 0.0 1.1 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 0.036 14.1 0.0 0.045 13.8 0.0 1.2 1 0 0 1 1 1 0 Dynamin family HTH_49 PF18010.1 NODE_54648_length_319_cov_1.887324_g46717_i0reverse_frame_3 - 0.13 12.1 0.1 0.27 11.2 0.1 1.5 1 0 0 1 1 1 0 Cry35Ab1 HTH C-terminal domain DUF2129 PF09902.9 NODE_54647_length_319_cov_1.904930_g46716_i0forward_frame_2 - 0.013 15.6 0.5 4.4 7.4 0.1 2.4 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2129) NRIP1_repr_1 PF15687.5 NODE_54646_length_319_cov_1.933099_g46715_i0reverse_frame_2 - 0.092 12.4 1.3 0.12 12.0 1.3 1.1 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 1 DUF3255 PF11631.8 NODE_54645_length_319_cov_1.992958_g46714_i0reverse_frame_2 - 0.17 11.8 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3255) Lep_receptor_Ig PF06328.11 NODE_54644_length_319_cov_2.038732_g46713_i0reverse_frame_3 - 0.024 14.6 0.2 0.042 13.8 0.2 1.3 1 0 0 1 1 1 0 Ig-like C2-type domain Pkinase PF00069.25 NODE_54642_length_319_cov_2.158451_g46711_i0forward_frame_2 - 2.7e-15 56.5 1.9 3.2e-15 56.2 1.9 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_54642_length_319_cov_2.158451_g46711_i0forward_frame_2 - 2.4e-11 43.4 0.4 2.8e-11 43.2 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase NCD1 PF04904.13 NODE_54642_length_319_cov_2.158451_g46711_i0forward_frame_2 - 0.018 15.0 0.2 0.04 13.9 0.2 1.7 1 1 0 1 1 1 0 NAB conserved region 1 (NCD1) zf-HC2 PF13490.6 NODE_54640_length_319_cov_2.186620_g46709_i0forward_frame_2 - 0.19 12.0 1.8 0.42 10.9 0.2 2.3 2 0 0 2 2 2 0 Putative zinc-finger OppC_N PF12911.7 NODE_54639_length_319_cov_2.235915_g46708_i0forward_frame_2 - 8.9e-16 57.6 0.7 8.9e-16 57.6 0.7 1.8 2 0 0 2 2 2 1 N-terminal TM domain of oligopeptide transport permease C DUF2116 PF09889.9 NODE_54639_length_319_cov_2.235915_g46708_i0forward_frame_2 - 0.25 11.3 1.3 0.31 11.0 0.2 1.6 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) MISS PF15822.5 NODE_54638_length_319_cov_2.288732_g46707_i0reverse_frame_2 - 0.017 15.0 0.7 0.02 14.8 0.7 1.1 1 0 0 1 1 1 0 MAPK-interacting and spindle-stabilising protein-like MA3 PF02847.17 NODE_54632_length_319_cov_2.545775_g46701_i0forward_frame_3 - 0.0027 17.7 0.1 0.0071 16.3 0.0 1.7 2 0 0 2 2 2 1 MA3 domain DUF1600 PF07667.11 NODE_54632_length_319_cov_2.545775_g46701_i0forward_frame_3 - 0.023 14.9 0.1 0.027 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) AvrL567-A PF11529.8 NODE_54632_length_319_cov_2.545775_g46701_i0forward_frame_3 - 0.043 14.0 0.2 0.075 13.2 0.2 1.4 1 0 0 1 1 1 0 Melampsora lini avirulence protein AvrL567-A SHIPPO-rpt PF07004.12 NODE_54630_length_319_cov_2.577465_g46699_i0reverse_frame_2 - 0.0013 19.5 0.2 0.028 15.4 0.0 2.5 2 0 0 2 2 2 1 Sperm-tail PG-rich repeat Glyco_hydro_4 PF02056.16 NODE_54624_length_319_cov_2.845070_g46693_i0reverse_frame_3 - 1.3e-07 31.4 0.0 1.8e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase Utp12 PF04003.12 NODE_54619_length_319_cov_3.281690_g46688_i0forward_frame_2 - 0.079 13.3 0.5 0.089 13.1 0.5 1.1 1 0 0 1 1 1 0 Dip2/Utp12 Family HigB-like_toxin PF05015.13 NODE_54616_length_319_cov_3.316901_g46685_i0reverse_frame_2 - 0.073 13.5 0.3 0.09 13.2 0.3 1.2 1 0 0 1 1 1 0 RelE-like toxin of type II toxin-antitoxin system HigB Cortexin PF11057.8 NODE_54614_length_319_cov_4.204225_g46683_i0reverse_frame_2 - 0.14 12.0 2.8 0.22 11.4 2.8 1.3 1 0 0 1 1 1 0 Cortexin of kidney Herpes_pp85 PF04637.12 NODE_54614_length_319_cov_4.204225_g46683_i0forward_frame_3 - 1.1 7.6 5.8 1.2 7.5 5.8 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Arm_3 PF16186.5 NODE_54604_length_319_cov_43.429577_g46673_i0reverse_frame_3 - 0.16 11.5 0.8 2 8.1 0.8 2.5 1 1 0 1 1 1 0 Atypical Arm repeat WHIM1 PF15612.6 NODE_54604_length_319_cov_43.429577_g46673_i0forward_frame_2 - 0.024 14.2 0.3 0.049 13.2 0.3 1.5 1 0 0 1 1 1 0 WSTF, HB1, Itc1p, MBD9 motif 1 KIAA1328 PF15369.6 NODE_54603_length_319_cov_44.894366_g46672_i0forward_frame_3 - 0.013 15.4 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein KIAA1328 DUF3930 PF13067.6 NODE_54600_length_319_cov_56.781690_g46669_i0reverse_frame_2 - 0.006 16.8 0.5 0.013 15.7 0.5 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3930) Glyco_transf_4 PF13439.6 NODE_54600_length_319_cov_56.781690_g46669_i0reverse_frame_2 - 0.089 12.8 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase Family 4 PPR_3 PF13812.6 NODE_54599_length_319_cov_56.813380_g46668_i0reverse_frame_3 - 0.00097 19.2 0.0 0.0016 18.4 0.0 1.3 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_54599_length_319_cov_56.813380_g46668_i0reverse_frame_3 - 0.0014 18.8 0.0 0.0023 18.1 0.0 1.4 1 0 0 1 1 1 1 PPR repeat family PPR_1 PF12854.7 NODE_54599_length_319_cov_56.813380_g46668_i0reverse_frame_3 - 0.017 14.8 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 PPR repeat PPR_long PF17177.4 NODE_54599_length_319_cov_56.813380_g46668_i0reverse_frame_3 - 0.063 12.6 0.0 0.072 12.5 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Csm2_III-A PF03750.13 NODE_54597_length_319_cov_61.461268_g46666_i0reverse_frame_3 - 0.018 15.9 0.4 0.02 15.7 0.4 1.1 1 0 0 1 1 1 0 Csm2 Type III-A DUF5624 PF18538.1 NODE_54597_length_319_cov_61.461268_g46666_i0reverse_frame_3 - 0.089 12.9 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5624) Imm61 PF15598.6 NODE_54597_length_319_cov_61.461268_g46666_i0reverse_frame_3 - 0.12 12.3 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 61 DUF3430 PF11912.8 NODE_54592_length_319_cov_65.514085_g46661_i0forward_frame_2 - 3.9 7.4 7.2 0.7 9.9 3.8 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3430) SgrT PF15894.5 NODE_54589_length_319_cov_70.116197_g46658_i0forward_frame_2 - 0.075 13.0 0.6 0.13 12.2 0.6 1.4 1 0 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT Kelch_1 PF01344.25 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 3.7e-05 23.2 0.9 0.0037 16.8 0.0 2.8 3 0 0 3 3 3 1 Kelch motif Kelch_3 PF13415.6 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 0.0026 18.0 3.7 0.15 12.4 0.0 2.9 2 1 0 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 0.018 15.0 0.0 3.4 7.8 0.0 2.3 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 0.02 14.9 0.1 0.22 11.6 0.0 2.3 2 0 0 2 2 2 0 Kelch motif Kelch_6 PF13964.6 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 0.054 13.8 0.3 1.3 9.4 0.2 2.3 2 1 0 2 2 2 0 Kelch motif Fam20C PF06702.12 NODE_54585_length_319_cov_74.214789_g46654_i0forward_frame_2 - 0.01 15.7 0.0 0.013 15.4 0.0 1.1 1 0 0 1 1 1 0 Golgi casein kinase, C-terminal, Fam20 NOB1_Zn_bind PF08772.11 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.0036 17.4 2.1 0.0059 16.7 2.1 1.4 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like RT_RNaseH PF17917.1 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.024 14.9 0.1 0.03 14.6 0.1 1.3 1 0 0 1 1 1 0 RNase H-like domain found in reverse transcriptase GBS_Bsp-like PF08481.10 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.029 14.5 0.3 0.057 13.5 0.4 1.5 2 0 0 2 2 2 0 GBS Bsp-like repeat Ribosomal_L34e PF01199.18 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.044 14.1 1.2 0.083 13.2 1.2 1.7 1 1 0 1 1 1 0 Ribosomal protein L34e HypA PF01155.19 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.046 13.7 1.3 0.064 13.3 1.3 1.4 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PriA_CRR PF18319.1 NODE_54582_length_319_cov_82.193662_g46651_i0reverse_frame_3 - 1.4 8.9 10.3 0.24 11.4 2.9 2.9 3 0 0 3 3 3 0 PriA DNA helicase Cys-rich region (CRR) domain Harakiri PF15196.6 NODE_54582_length_319_cov_82.193662_g46651_i0reverse_frame_2 - 0.05 14.1 7.0 0.056 13.9 5.3 2.0 1 1 0 1 1 1 0 Activator of apoptosis harakiri Toxin_2 PF00451.19 NODE_54581_length_319_cov_83.253521_g46650_i0forward_frame_3 - 0.14 12.5 1.9 0.25 11.7 1.9 1.4 1 0 0 1 1 1 0 Scorpion short toxin, BmKK2 PAGK PF15284.6 NODE_54581_length_319_cov_83.253521_g46650_i0forward_frame_3 - 1.2 9.1 4.2 0.52 10.3 1.6 1.7 2 0 0 2 2 2 0 Phage-encoded virulence factor ATP_synth_reg PF14960.6 NODE_54578_length_319_cov_92.186620_g46647_i0reverse_frame_2 - 0.85 9.2 4.4 0.73 9.4 2.4 1.9 1 1 1 2 2 2 0 ATP synthase regulation Tantalus PF15386.6 NODE_54578_length_319_cov_92.186620_g46647_i0forward_frame_3 - 0.35 11.0 6.2 0.54 10.4 6.2 1.2 1 0 0 1 1 1 0 Drosophila Tantalus-like CSD PF00313.22 NODE_54576_length_319_cov_97.904930_g46645_i0reverse_frame_3 - 0.034 14.0 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 'Cold-shock' DNA-binding domain Arteri_Gl PF00951.18 NODE_54574_length_319_cov_106.644366_g46643_i0forward_frame_2 - 0.29 10.9 3.1 0.33 10.7 3.1 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein SAG PF04092.13 NODE_54572_length_319_cov_133.742958_g46641_i0forward_frame_2 - 0.029 15.2 0.4 0.031 15.1 0.4 1.1 1 0 0 1 1 1 0 SRS domain RNA_pol_N PF01194.17 NODE_54571_length_319_cov_135.975352_g46640_i0reverse_frame_3 - 1.9e-13 50.5 0.0 3e-13 49.8 0.0 1.4 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit EutQ PF06249.12 NODE_54571_length_319_cov_135.975352_g46640_i0reverse_frame_3 - 1.1 9.0 3.5 0.28 10.9 0.8 1.4 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutQ JSRP PF15312.6 NODE_54570_length_319_cov_145.954225_g46639_i0reverse_frame_2 - 1.2 9.1 5.1 0.26 11.2 0.8 1.9 2 0 0 2 2 2 0 Junctional sarcoplasmic reticulum protein UPF0020 PF01170.18 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 1.3e-13 51.1 0.0 5.1e-12 45.9 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 1.5e-10 41.6 0.0 2e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 1.1e-09 38.7 0.0 1.5e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 1.7e-07 31.1 0.0 1.9e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.00028 20.3 0.0 0.00033 20.0 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Cons_hypoth95 PF03602.15 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.00041 20.1 0.0 0.00048 19.8 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 95 N6_N4_Mtase PF01555.18 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.00058 19.6 0.0 0.00076 19.3 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Met_10 PF02475.16 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.00075 19.3 0.0 0.00087 19.1 0.0 1.0 1 0 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.013 14.9 0.0 0.015 14.7 0.0 1.0 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) GCD14 PF08704.10 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.014 15.1 0.0 0.015 14.9 0.0 1.0 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit MTS PF05175.14 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.014 15.0 0.0 0.016 14.8 0.0 1.0 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_24 PF13578.6 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.024 15.7 0.0 0.027 15.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PG_isomerase_N PF18353.1 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.064 13.7 0.1 0.075 13.4 0.1 1.2 1 0 0 1 1 1 0 Phosphoglucose isomerase N-terminal domain Methyltransf_8 PF05148.15 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.088 12.6 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_15 PF09445.10 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.13 11.8 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase DUF1816 PF08846.10 NODE_54568_length_319_cov_161.200704_g46637_i0reverse_frame_3 - 0.11 12.6 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1816) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks222.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks222.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks222.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks222.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Baculo_8kDa PF06096.11 NODE_54565_length_319_cov_180.623239_g46634_i0forward_frame_3 - 0.15 12.2 0.1 0.24 11.5 0.1 1.5 1 1 0 1 1 1 0 Baculoviridae 8.2 KDa protein LAT PF15234.6 NODE_54564_length_319_cov_192.271127_g46633_i0reverse_frame_2 - 2.2 8.0 5.4 2.3 7.9 5.4 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells Ycf1 PF05758.12 NODE_54563_length_319_cov_204.926056_g46632_i0forward_frame_3 - 0.21 9.4 0.2 0.25 9.2 0.2 1.0 1 0 0 1 1 1 0 Ycf1 KH_4 PF13083.6 NODE_54554_length_319_cov_592.267606_g46623_i0reverse_frame_2 - 0.047 13.6 1.3 8.2 6.4 0.1 2.2 2 0 0 2 2 2 0 KH domain Matrilin_ccoil PF10393.9 NODE_54554_length_319_cov_592.267606_g46623_i0reverse_frame_2 - 0.24 11.3 1.0 13 5.8 0.1 2.1 1 1 1 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin IspA PF04279.15 NODE_54549_length_320_cov_1.400000_g46618_i0forward_frame_3 - 7.8e-09 36.0 5.5 1e-08 35.5 5.5 1.2 1 0 0 1 1 1 1 Intracellular septation protein A HD-ZIP_N PF04618.12 NODE_54546_length_320_cov_1.596491_g46615_i0reverse_frame_2 - 0.18 12.3 0.1 0.24 11.9 0.1 1.3 1 0 0 1 1 1 0 HD-ZIP protein N terminus Aldedh PF00171.22 NODE_54546_length_320_cov_1.596491_g46615_i0forward_frame_2 - 1.2e-32 113.1 0.0 1.3e-32 113.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Pox_A51 PF04948.13 NODE_54538_length_320_cov_1.817544_g46607_i0forward_frame_2 - 0.01 14.7 0.1 0.011 14.6 0.1 1.0 1 0 0 1 1 1 0 Poxvirus A51 protein Retrotran_gag_2 PF14223.6 NODE_54537_length_320_cov_1.824561_g46606_i0reverse_frame_2 - 1.3e-10 41.1 0.0 1.5e-10 40.9 0.0 1.0 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type SCAN PF02023.17 NODE_54537_length_320_cov_1.824561_g46606_i0reverse_frame_2 - 0.074 12.9 0.1 0.13 12.1 0.1 1.5 1 1 0 1 1 1 0 SCAN domain Ribosomal_S7 PF00177.21 NODE_54537_length_320_cov_1.824561_g46606_i0reverse_frame_2 - 0.11 12.1 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S7p/S5e CobN-Mg_chel PF02514.16 NODE_54537_length_320_cov_1.824561_g46606_i0reverse_frame_2 - 0.14 9.8 0.0 0.15 9.8 0.0 1.1 1 0 0 1 1 1 0 CobN/Magnesium Chelatase UPAR_LY6_2 PF16975.5 NODE_54534_length_320_cov_1.926316_g46603_i0forward_frame_3 - 0.097 12.9 0.2 0.12 12.5 0.2 1.1 1 0 0 1 1 1 0 Ly6/PLAUR domain-containing protein 6, Lypd6 TonB_N PF16031.5 NODE_54533_length_320_cov_1.936842_g46602_i0reverse_frame_3 - 5.9e-20 72.1 43.2 6.9e-20 71.9 43.2 1.1 1 0 0 1 1 1 1 TonB polyproline region Trypan_PARP PF05887.11 NODE_54533_length_320_cov_1.936842_g46602_i0reverse_frame_3 - 0.14 12.1 21.9 0.21 11.6 21.9 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) FAP PF07174.11 NODE_54533_length_320_cov_1.936842_g46602_i0reverse_frame_3 - 0.62 9.5 19.2 0.74 9.2 19.2 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) T2SSppdC PF12528.8 NODE_54530_length_320_cov_2.108772_g46599_i0reverse_frame_2 - 0.044 14.6 0.4 0.18 12.6 0.1 1.9 2 0 0 2 2 2 0 Type II secretion prepilin peptidase dependent protein C DUF4064 PF13273.6 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.00095 19.4 3.4 0.0011 19.2 3.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF4064) DUF5383 PF17355.2 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.034 14.5 1.8 0.04 14.3 1.8 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5383) DUF2207 PF09972.9 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.042 12.6 0.2 0.046 12.5 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5393 PF17371.2 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.059 11.5 0.9 0.059 11.5 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5393) DUF1218 PF06749.12 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.089 13.3 0.1 0.13 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) Chorismate_bind PF00425.18 NODE_54528_length_320_cov_2.196491_g46597_i0reverse_frame_3 - 1.6e-16 60.6 0.0 1.9e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme NDUF_B6 PF09782.9 NODE_54528_length_320_cov_2.196491_g46597_i0reverse_frame_3 - 0.044 13.9 0.2 0.057 13.6 0.2 1.2 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit Acetyltransf_11 PF13720.6 NODE_54527_length_320_cov_2.287719_g46596_i0reverse_frame_3 - 0.02 15.3 0.1 0.032 14.7 0.1 1.4 1 1 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ERp29 PF07749.12 NODE_54527_length_320_cov_2.287719_g46596_i0reverse_frame_3 - 0.087 13.7 1.1 0.18 12.7 1.2 1.5 1 1 1 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain DUF2417 PF10329.9 NODE_54527_length_320_cov_2.287719_g46596_i0forward_frame_2 - 0.1 12.0 4.2 0.12 11.7 4.2 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) SWIRM-assoc_1 PF16495.5 NODE_54520_length_320_cov_2.607018_g46589_i0forward_frame_2 - 0.13 12.2 0.3 0.22 11.5 0.3 1.2 1 0 0 1 1 1 0 SWIRM-associated region 1 LA-virus_coat PF09220.10 NODE_54519_length_320_cov_2.771930_g46588_i0reverse_frame_3 - 0.027 13.1 0.0 0.03 12.9 0.0 1.0 1 0 0 1 1 1 0 L-A virus, major coat protein Sigma70_r1_2 PF00140.20 NODE_54519_length_320_cov_2.771930_g46588_i0forward_frame_2 - 0.25 11.4 0.0 0.4 10.7 0.0 1.3 1 0 0 1 1 1 0 Sigma-70 factor, region 1.2 Adhes-Ig_like PF09085.10 NODE_54518_length_320_cov_2.775439_g46587_i0reverse_frame_3 - 0.15 12.2 0.3 0.23 11.6 0.3 1.2 1 0 0 1 1 1 0 Adhesion molecule, immunoglobulin-like MFS_1_like PF12832.7 NODE_54518_length_320_cov_2.775439_g46587_i0reverse_frame_2 - 0.0093 14.9 6.5 0.012 14.5 6.5 1.0 1 0 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 NODE_54518_length_320_cov_2.775439_g46587_i0reverse_frame_2 - 0.096 11.6 19.8 0.11 11.4 19.8 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily IF-2B PF01008.17 NODE_54518_length_320_cov_2.775439_g46587_i0reverse_frame_2 - 0.1 11.8 0.2 0.12 11.6 0.2 1.1 1 0 0 1 1 1 0 Initiation factor 2 subunit family DUF1270 PF06900.11 NODE_54518_length_320_cov_2.775439_g46587_i0reverse_frame_2 - 2.4 8.6 7.3 12 6.3 1.5 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1270) PapD_N PF00345.20 NODE_54515_length_320_cov_3.073684_g46584_i0forward_frame_2 - 9e-29 99.9 0.0 1.1e-28 99.7 0.0 1.0 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain Peptidase_M50B PF13398.6 NODE_54514_length_320_cov_3.182456_g46583_i0forward_frame_2 - 0.072 12.7 0.1 0.089 12.4 0.1 1.0 1 0 0 1 1 1 0 Peptidase M50B-like DUF2075 PF09848.9 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.0056 16.0 0.0 0.0065 15.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) POTRA_2 PF08479.11 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.014 15.3 0.0 0.028 14.3 0.0 1.5 1 0 0 1 1 1 0 POTRA domain, ShlB-type DEAD_2 PF06733.15 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.02 14.5 0.0 0.036 13.7 0.0 1.4 2 0 0 2 2 2 0 DEAD_2 DUF4507 PF14964.6 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.079 11.9 0.3 0.093 11.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4507) 2_5_RNA_ligase2 PF13563.6 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.12 12.2 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 2'-5' RNA ligase superfamily MutS_V PF00488.21 NODE_54507_length_320_cov_4.442105_g46576_i0forward_frame_3 - 2.2e-42 145.2 0.1 2.5e-42 145.1 0.1 1.0 1 0 0 1 1 1 1 MutS domain V AAA_29 PF13555.6 NODE_54507_length_320_cov_4.442105_g46576_i0forward_frame_3 - 0.024 14.4 0.0 0.089 12.6 0.0 1.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_27 PF13514.6 NODE_54507_length_320_cov_4.442105_g46576_i0forward_frame_3 - 0.025 14.2 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain DAP3 PF10236.9 NODE_54507_length_320_cov_4.442105_g46576_i0forward_frame_3 - 0.1 11.7 0.0 0.18 10.9 0.0 1.4 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 Rad17 PF03215.15 NODE_54507_length_320_cov_4.442105_g46576_i0forward_frame_3 - 0.12 12.3 0.0 0.12 12.3 0.0 1.2 1 1 0 1 1 1 0 Rad17 P-loop domain AAA_14 PF13173.6 NODE_54507_length_320_cov_4.442105_g46576_i0forward_frame_3 - 0.12 12.4 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain Orthopox_A43R PF06517.11 NODE_54501_length_320_cov_31.417544_g46570_i0reverse_frame_2 - 0.04 13.7 0.6 0.049 13.4 0.6 1.3 1 0 0 1 1 1 0 Orthopoxvirus A43R protein DUF3333 PF11812.8 NODE_54499_length_320_cov_46.070175_g46568_i0forward_frame_3 - 0.0084 16.3 0.4 0.013 15.7 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3333) TLD PF07534.16 NODE_54497_length_320_cov_51.698246_g46566_i0reverse_frame_3 - 0.033 14.4 0.0 0.043 14.0 0.0 1.2 1 0 0 1 1 1 0 TLD Peptidase_C1 PF00112.23 NODE_54493_length_320_cov_56.571930_g46562_i0forward_frame_3 - 4.8e-12 46.4 3.1 6.9e-12 45.9 3.1 1.4 1 1 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_54493_length_320_cov_56.571930_g46562_i0forward_frame_3 - 0.084 11.6 0.3 0.098 11.4 0.3 1.1 1 0 0 1 1 1 0 Peptidase C1-like family RFX5_DNA_bdg PF14621.6 NODE_54491_length_320_cov_58.989474_g46560_i0forward_frame_2 - 0.094 12.5 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 RFX5 DNA-binding domain DUF5524 PF17662.1 NODE_54480_length_320_cov_73.740351_g46549_i0reverse_frame_2 - 0.059 12.7 0.0 0.068 12.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5524) RRM_1 PF00076.22 NODE_54477_length_320_cov_81.371930_g46546_i0forward_frame_2 - 3.8e-20 71.5 0.0 4.9e-20 71.1 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ATG16 PF08614.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.00055 20.2 9.7 0.00063 20.0 9.7 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) HIP1_clath_bdg PF16515.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0011 19.5 9.6 0.0015 19.1 9.6 1.1 1 0 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF16 PF01519.16 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0017 18.8 5.3 0.002 18.6 5.3 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF16 Rootletin PF15035.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.002 18.2 7.0 0.002 18.2 7.0 1.3 1 1 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion FAM76 PF16046.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0024 17.3 12.7 0.0073 15.7 12.7 1.7 1 1 0 1 1 1 1 FAM76 protein DivIC PF04977.15 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0031 17.2 13.0 0.052 13.3 3.9 2.4 1 1 2 3 3 3 2 Septum formation initiator CENP-F_leu_zip PF10473.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0061 16.6 9.9 0.0073 16.3 9.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.01 14.7 10.3 0.012 14.5 10.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein CEP63 PF17045.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.018 15.0 11.4 0.34 10.8 2.1 2.0 1 1 1 2 2 2 0 Centrosomal protein of 63 kDa AAA_13 PF13166.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.031 13.0 5.8 0.034 12.8 5.8 1.0 1 0 0 1 1 1 0 AAA domain CC2-LZ PF16516.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.031 14.6 6.5 0.031 14.6 6.5 2.1 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator ADIP PF11559.8 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.031 14.3 9.9 0.047 13.8 9.9 1.4 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding HMMR_N PF15905.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.039 13.4 10.9 0.046 13.2 10.9 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal CALCOCO1 PF07888.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.043 12.7 10.4 0.052 12.4 10.4 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like DUF4200 PF13863.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.046 14.1 15.6 0.081 13.3 14.9 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) zf-C4H2 PF10146.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.053 13.8 9.9 0.061 13.6 9.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein Fez1 PF06818.15 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.075 13.5 9.8 0.086 13.3 9.0 1.4 1 1 0 1 1 1 0 Fez1 Golgin_A5 PF09787.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.09 12.2 11.0 0.1 12.1 11.0 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 OmpH PF03938.14 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.092 13.1 12.1 0.19 12.1 12.1 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF3552 PF12072.8 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.12 11.8 14.5 0.17 11.3 13.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) BRE1 PF08647.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.15 12.2 13.7 0.19 11.8 13.7 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase Fib_alpha PF08702.10 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.15 12.2 8.3 0.21 11.8 8.3 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family FIN1 PF17300.2 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.19 11.2 9.0 0.22 11.0 9.0 1.1 1 0 0 1 1 1 0 Filaments in between nuclei protein-1 Dzip-like_N PF13815.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.19 11.7 6.3 0.091 12.7 2.6 1.9 1 1 1 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal TMPIT PF07851.13 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.2 10.9 6.5 0.22 10.7 6.5 1.0 1 0 0 1 1 1 0 TMPIT-like protein HAUS5 PF14817.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.21 10.3 6.9 0.24 10.1 6.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 5 DUF3450 PF11932.8 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.23 10.7 9.3 0.075 12.3 5.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) bZIP_1 PF00170.21 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.27 11.3 14.2 0.68 10.1 2.5 3.1 1 1 2 3 3 3 0 bZIP transcription factor DUF724 PF05266.14 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.28 11.0 10.4 0.31 10.8 10.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Lectin_N PF03954.14 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.33 10.7 2.5 0.45 10.3 2.4 1.3 1 1 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF4446 PF14584.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.36 10.8 8.4 0.19 11.7 5.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Atg14 PF10186.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.4 9.7 10.1 0.42 9.7 10.1 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4407 PF14362.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.52 9.6 3.7 0.65 9.3 3.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) APG6_N PF17675.1 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.54 10.8 11.6 0.94 10.0 11.6 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region UPF0242 PF06785.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.57 10.3 13.2 0.96 9.5 13.2 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2203 PF09969.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.63 10.8 6.3 1.6 9.5 6.3 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) MRPL52 PF18699.1 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.74 10.0 9.2 0.36 11.0 6.7 1.7 1 1 1 2 2 2 0 Mitoribosomal protein mL52 Tho2 PF11262.8 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.78 8.9 8.6 0.93 8.6 8.6 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 FlxA PF14282.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1 9.4 13.3 0.62 10.1 7.5 2.0 1 1 1 2 2 2 0 FlxA-like protein DUF1664 PF07889.12 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1.2 9.2 7.2 2.6 8.1 7.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) BST2 PF16716.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1.2 9.8 8.3 4.1 8.1 8.0 1.8 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 DUF4094 PF13334.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1.2 9.6 7.2 0.52 10.8 3.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) Fungal_TACC PF12709.7 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1.4 9.4 12.8 1.1 9.7 4.4 2.9 1 1 2 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins SlyX PF04102.12 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1.5 9.5 5.5 2.8 8.6 1.9 2.2 1 1 1 2 2 2 0 SlyX Ly49 PF08391.10 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 2 8.8 7.2 2.6 8.4 7.1 1.3 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region YabA PF06156.13 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 2.3 8.9 8.9 1.4 9.6 6.5 1.6 1 1 1 2 2 2 0 Initiation control protein YabA PKcGMP_CC PF16808.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 3 7.8 18.8 0.24 11.3 1.8 4.1 2 1 2 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase GrpE PF01025.19 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 3.8 7.2 12.8 1.2 8.8 5.9 2.0 1 1 1 2 2 2 0 GrpE LapA_dom PF06305.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 4.4 7.2 5.1 14 5.6 1.3 2.9 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain LMBR1 PF04791.16 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 8.2 5.2 5.4 9 5.1 5.4 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Phage_CRI PF05144.14 NODE_54469_length_320_cov_114.084211_g46538_i0forward_frame_3 - 0.04 13.2 0.0 0.046 13.0 0.0 1.1 1 0 0 1 1 1 0 Phage replication protein CRI Tryp_alpha_amyl PF00234.22 NODE_54465_length_320_cov_137.364912_g46534_i0reverse_frame_3 - 0.83 10.1 9.0 3.3 8.2 9.0 1.9 1 1 0 1 1 1 0 Protease inhibitor/seed storage/LTP family Innexin PF00876.18 NODE_54465_length_320_cov_137.364912_g46534_i0forward_frame_3 - 0.33 10.2 3.8 0.099 11.9 1.2 1.5 2 0 0 2 2 2 0 Innexin Thymidylat_synt PF00303.19 NODE_54462_length_320_cov_155.505263_g46531_i0forward_frame_3 - 0.0046 16.1 0.1 0.0056 15.8 0.1 1.1 1 0 0 1 1 1 1 Thymidylate synthase Alpha_GJ PF03229.13 NODE_54459_length_320_cov_214.266667_g46528_i0reverse_frame_2 - 0.029 14.9 1.3 0.044 14.3 1.3 1.2 1 0 0 1 1 1 0 Alphavirus glycoprotein J DUF364 PF04016.12 NODE_54457_length_320_cov_317.554386_g46526_i0forward_frame_2 - 0.19 11.3 0.2 0.53 9.8 0.1 1.7 1 1 1 2 2 2 0 Putative heavy-metal chelation PSI_integrin PF17205.3 NODE_54454_length_320_cov_382.371930_g46523_i0forward_frame_3 - 0.14 11.9 5.0 0.58 9.9 5.0 2.0 1 1 0 1 1 1 0 Integrin plexin domain Pterin_4a PF01329.19 NODE_54453_length_320_cov_394.056140_g46522_i0reverse_frame_3 - 0.13 12.5 0.1 0.28 11.4 0.0 1.5 2 0 0 2 2 2 0 Pterin 4 alpha carbinolamine dehydratase NDUF_B7 PF05676.13 NODE_54449_length_321_cov_1.115385_g46518_i0forward_frame_3 - 0.057 13.2 1.2 0.094 12.5 0.4 1.6 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) WTF PF03303.13 NODE_54445_length_321_cov_1.555944_g46514_i0reverse_frame_2 - 0.95 9.1 5.8 0.69 9.6 4.7 1.3 1 1 0 1 1 1 0 WTF protein Nitrate_red_del PF02613.15 NODE_54443_length_321_cov_1.678322_g46512_i0forward_frame_3 - 0.036 14.1 0.0 0.039 13.9 0.0 1.2 1 0 0 1 1 1 0 Nitrate reductase delta subunit EF-hand_7 PF13499.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 3.8e-09 36.9 1.4 5.6e-09 36.3 1.4 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 4.3e-09 36.1 0.7 6.8e-09 35.4 0.7 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 1.9e-07 30.4 1.2 0.00015 21.4 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 1.7e-06 27.2 3.2 3.6e-05 23.0 0.3 2.7 2 1 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 0.00017 20.9 2.9 0.00029 20.2 0.1 2.4 3 0 0 3 3 3 1 EF hand p25-alpha PF05517.12 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 0.043 14.0 0.2 0.056 13.6 0.2 1.3 1 0 0 1 1 1 0 p25-alpha EF-hand_4 PF12763.7 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 0.079 12.9 1.9 0.21 11.5 1.9 1.7 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand FAM110_C PF14160.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 0.12 13.4 0.0 0.2 12.7 0.0 1.3 1 0 0 1 1 1 0 Centrosome-associated C terminus TBCC PF07986.12 NODE_54439_length_321_cov_1.783217_g46508_i0reverse_frame_2 - 0.002 17.8 0.6 0.0037 17.0 0.6 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C zf-B_box PF00643.24 NODE_54438_length_321_cov_1.793706_g46507_i0reverse_frame_2 - 0.16 12.1 4.6 0.33 11.1 4.6 1.7 1 1 0 1 1 1 0 B-box zinc finger Ribosomal_L36 PF00444.18 NODE_54438_length_321_cov_1.793706_g46507_i0reverse_frame_2 - 0.49 10.6 9.9 1 9.6 2.0 2.8 2 1 0 2 2 2 0 Ribosomal protein L36 Mononeg_RNA_pol PF00946.19 NODE_54434_length_321_cov_2.097902_g46503_i0forward_frame_3 - 0.095 10.3 0.2 0.27 8.8 0.1 1.6 1 1 1 2 2 2 0 Mononegavirales RNA dependent RNA polymerase Ephrin_rec_like PF07699.13 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 8.7e-18 63.8 30.4 3.9e-08 32.9 4.2 3.2 1 1 2 3 3 3 3 Putative ephrin-receptor like NCD3G PF07562.14 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 2e-08 34.0 18.5 0.0048 16.8 1.8 3.4 1 1 4 5 5 5 5 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 8.6e-07 29.3 17.0 0.019 15.3 0.1 4.8 2 2 2 4 4 4 4 TNFR/NGFR cysteine-rich region VSP PF03302.13 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 0.18 10.6 36.8 0.098 11.5 19.2 2.0 1 1 1 2 2 2 0 Giardia variant-specific surface protein DUF2318 PF10080.9 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 2 8.5 15.3 4.5 7.4 3.6 2.3 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) VP_N-CPKC PF11475.8 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 2.2 8.3 8.6 4.3 7.3 0.5 3.9 3 1 1 4 4 4 0 Virion protein N terminal domain zf-MIZ PF02891.20 NODE_54428_length_321_cov_2.300699_g46497_i0reverse_frame_2 - 0.025 14.3 0.9 0.044 13.5 0.2 1.7 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger DUF2706 PF10913.8 NODE_54424_length_321_cov_2.395105_g46493_i0reverse_frame_2 - 0.075 12.9 1.1 0.16 11.8 1.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2706) MORN PF02493.20 NODE_54422_length_321_cov_2.486014_g46491_i0reverse_frame_3 - 9.1e-10 37.9 7.4 0.00065 19.4 0.2 3.3 3 1 0 3 3 3 2 MORN repeat Ank_2 PF12796.7 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 4.3e-19 68.9 0.5 4.5e-13 49.6 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 6.4e-13 48.5 1.3 3.3e-05 24.1 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 2e-11 44.2 0.2 1.9e-08 34.7 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 1.1e-09 38.3 0.3 1e-06 28.9 0.1 2.8 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 2.4e-09 36.7 0.2 0.01 16.3 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Pkinase PF00069.25 NODE_54420_length_321_cov_2.653846_g46489_i0forward_frame_3 - 0.0036 16.7 0.0 0.0049 16.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain HSP90 PF00183.18 NODE_54418_length_321_cov_2.867133_g46487_i0reverse_frame_2 - 2.7e-10 39.8 0.0 3.1e-10 39.6 0.0 1.0 1 0 0 1 1 1 1 Hsp90 protein PE PF00934.20 NODE_54418_length_321_cov_2.867133_g46487_i0reverse_frame_2 - 0.015 15.6 0.0 0.021 15.1 0.0 1.3 1 0 0 1 1 1 0 PE family Atg8 PF02991.16 NODE_54414_length_321_cov_3.167832_g46483_i0forward_frame_2 - 0.014 15.6 1.1 0.016 15.4 1.1 1.1 1 0 0 1 1 1 0 Autophagy protein Atg8 ubiquitin like SCF PF02404.15 NODE_54413_length_321_cov_3.272727_g46482_i0reverse_frame_3 - 0.035 13.5 1.1 0.039 13.3 1.1 1.0 1 0 0 1 1 1 0 Stem cell factor DUF2564 PF10819.8 NODE_54413_length_321_cov_3.272727_g46482_i0reverse_frame_2 - 0.11 12.9 3.2 0.16 12.3 0.5 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF2564) DUF3368 PF11848.8 NODE_54407_length_321_cov_4.877622_g46476_i0forward_frame_3 - 0.039 13.7 0.0 0.083 12.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3368) DUF2207 PF09972.9 NODE_54407_length_321_cov_4.877622_g46476_i0forward_frame_3 - 0.099 11.4 4.7 0.12 11.1 4.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF805 PF05656.14 NODE_54407_length_321_cov_4.877622_g46476_i0forward_frame_3 - 0.58 10.6 4.3 0.83 10.1 4.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF805) DUF4974 PF16344.5 NODE_54401_length_321_cov_35.863636_g46470_i0reverse_frame_2 - 0.041 13.9 0.2 0.059 13.4 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4974) PMT PF02366.18 NODE_54399_length_321_cov_40.339161_g46468_i0forward_frame_3 - 0.093 12.3 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Ribosomal_S18 PF01084.20 NODE_54397_length_321_cov_43.853147_g46466_i0reverse_frame_2 - 0.029 14.6 0.8 0.054 13.7 0.4 1.7 1 1 0 1 1 1 0 Ribosomal protein S18 Glyco_transf_5 PF08323.11 NODE_54396_length_321_cov_50.923077_g46465_i0forward_frame_3 - 3.6e-12 46.5 0.0 3.8e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 Starch synthase catalytic domain CEBP_ZZ PF16366.5 NODE_54396_length_321_cov_50.923077_g46465_i0forward_frame_2 - 0.035 14.3 0.2 0.049 13.9 0.2 1.2 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain PRIMA1 PF16101.5 NODE_54394_length_321_cov_60.667832_g46463_i0reverse_frame_3 - 0.22 11.6 1.1 0.34 10.9 1.1 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 60KD_IMP PF02096.20 NODE_54393_length_321_cov_61.171329_g46462_i0reverse_frame_3 - 0.044 13.7 0.1 0.059 13.3 0.1 1.1 1 0 0 1 1 1 0 60Kd inner membrane protein PqqD PF05402.12 NODE_54393_length_321_cov_61.171329_g46462_i0reverse_frame_3 - 0.1 12.9 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) Nucleoporin_FG PF13634.6 NODE_54388_length_321_cov_71.472028_g46457_i0forward_frame_3 - 9.6e-11 42.4 15.7 1.6e-10 41.7 15.7 1.3 1 0 0 1 1 1 1 Nucleoporin FG repeat region FUSC PF04632.12 NODE_54385_length_321_cov_73.576923_g46454_i0reverse_frame_3 - 1.7 7.1 6.3 2 6.8 6.3 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family SID-1_RNA_chan PF13965.6 NODE_54385_length_321_cov_73.576923_g46454_i0forward_frame_2 - 0.12 10.7 2.5 0.13 10.6 2.5 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Presenilin PF01080.17 NODE_54385_length_321_cov_73.576923_g46454_i0forward_frame_2 - 4.3 6.0 4.6 4.7 5.9 4.6 1.0 1 0 0 1 1 1 0 Presenilin PPR_2 PF13041.6 NODE_54384_length_321_cov_78.041958_g46453_i0forward_frame_2 - 8.7e-05 22.6 0.0 0.016 15.4 0.0 2.3 2 0 0 2 2 2 2 PPR repeat family PPR PF01535.20 NODE_54384_length_321_cov_78.041958_g46453_i0forward_frame_2 - 0.0051 17.0 0.4 8.2 6.9 0.0 3.2 3 0 0 3 3 3 2 PPR repeat DAP10 PF07213.11 NODE_54384_length_321_cov_78.041958_g46453_i0forward_frame_2 - 0.22 11.5 1.5 0.32 11.0 1.5 1.3 1 0 0 1 1 1 0 DAP10 membrane protein SPT6_acidic PF14632.6 NODE_54383_length_321_cov_81.255245_g46452_i0reverse_frame_2 - 2.8 8.6 25.9 0.98 10.0 3.2 2.1 2 0 0 2 2 2 0 Acidic N-terminal SPT6 Copine PF07002.16 NODE_54380_length_321_cov_94.311189_g46449_i0forward_frame_3 - 5.9e-10 39.0 0.0 6.4e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Copine dCMP_cyt_deam_1 PF00383.23 NODE_54380_length_321_cov_94.311189_g46449_i0forward_frame_2 - 0.87 9.5 4.7 11 5.9 0.1 2.1 2 0 0 2 2 2 0 Cytidine and deoxycytidylate deaminase zinc-binding region WD40 PF00400.32 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 9.6e-26 89.5 6.7 9.1e-13 48.5 1.1 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 4.8e-07 30.0 0.2 0.00034 20.9 0.1 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Ntox50 PF15542.6 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.0048 17.7 0.4 1.3 9.9 0.0 2.2 2 0 0 2 2 2 2 Bacterial toxin 50 Nup160 PF11715.8 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.0077 14.9 1.0 0.037 12.7 0.2 1.8 1 1 1 2 2 2 1 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.0096 14.9 1.5 1.4 7.8 0.3 2.2 1 1 2 3 3 3 3 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.011 15.1 0.0 0.058 12.7 0.0 1.7 1 1 1 2 2 2 0 WD40-like domain AsnC_trans_reg PF01037.21 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.029 14.3 0.0 0.27 11.2 0.0 2.2 2 1 0 2 2 2 0 Lrp/AsnC ligand binding domain PALB2_WD40 PF16756.5 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.07 12.0 1.0 0.1 11.5 0.9 1.3 1 1 0 1 1 1 0 Partner and localizer of BRCA2 WD40 domain VID27 PF08553.10 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.13 11.3 0.1 0.14 11.2 0.1 1.1 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain NAD_binding_6 PF08030.12 NODE_54375_length_321_cov_118.548951_g46444_i0reverse_frame_2 - 2.2e-05 24.7 0.0 2.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Ferric reductase NAD binding domain DUF4741 PF15897.5 NODE_54372_length_321_cov_146.388112_g46441_i0reverse_frame_2 - 0.0013 18.6 0.1 0.0015 18.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4741) DUF2618 PF10940.8 ORF99900 - 0.11 12.4 0.1 0.18 11.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2618) SR-25 PF10500.9 ORF99676 - 0.035 13.7 13.6 0.037 13.6 13.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Vfa1 PF08432.10 ORF99676 - 0.21 11.9 16.4 0.24 11.7 16.4 1.0 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 XRN_M PF17846.1 ORF99676 - 0.87 8.5 10.6 0.97 8.3 10.6 1.0 1 0 0 1 1 1 0 Xrn1 helical domain Menin PF05053.13 ORF99676 - 0.92 7.8 15.3 1.1 7.6 15.3 1.0 1 0 0 1 1 1 0 Menin ANAPC1 PF12859.7 ORF99676 - 1.1 9.8 5.4 1.5 9.4 5.4 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 Presenilin PF01080.17 ORF99676 - 1.5 7.5 15.8 1.6 7.4 15.8 1.0 1 0 0 1 1 1 0 Presenilin Macoilin PF09726.9 ORF99676 - 1.9 7.0 14.1 1.8 7.0 14.1 1.0 1 0 0 1 1 1 0 Macoilin family DUF5523 PF17661.1 ORF99676 - 1.9 8.1 17.0 2.4 7.8 17.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5523) Gti1_Pac2 PF09729.9 ORF99676 - 2.5 8.2 13.2 2.8 8.0 13.2 1.1 1 0 0 1 1 1 0 Gti1/Pac2 family DUF755 PF05501.11 ORF99676 - 2.8 8.2 19.4 4.2 7.7 19.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Pex14_N PF04695.13 ORF99676 - 2.9 8.5 8.6 3 8.5 8.6 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Rtf2 PF04641.12 ORF99676 - 3 7.1 12.1 3.4 7.0 12.1 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger CCDC106 PF15794.5 ORF99676 - 3.3 7.4 17.5 4.2 7.0 17.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 PNISR PF15996.5 ORF99676 - 3.6 7.8 17.3 3.7 7.8 17.3 1.1 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR Apt1 PF10351.9 ORF99676 - 4 6.2 17.7 3.9 6.2 17.7 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain AF-4 PF05110.13 ORF99676 - 4.4 5.3 27.7 4.7 5.2 27.7 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein CDC45 PF02724.14 ORF99676 - 4.5 5.5 22.8 4.7 5.4 22.8 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4614 PF15391.6 ORF99676 - 4.9 7.1 21.1 6.3 6.8 21.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) SpoIIIAH PF12685.7 ORF99676 - 5.8 6.7 20.0 6.6 6.5 20.0 1.1 1 0 0 1 1 1 0 SpoIIIAH-like protein Tim54 PF11711.8 ORF99676 - 5.8 5.6 12.9 7.7 5.2 12.9 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 FAM60A PF15396.6 ORF99676 - 5.9 6.8 11.8 6.3 6.7 11.8 1.1 1 0 0 1 1 1 0 Protein Family FAM60A NPR3 PF03666.13 ORF99676 - 6.2 5.5 16.6 6.6 5.4 16.6 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF1635 PF07795.11 ORF99676 - 6.6 6.5 12.0 8.2 6.2 12.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) PPL5 PF18168.1 ORF99676 - 6.8 5.9 12.7 7.5 5.8 12.7 1.1 1 0 0 1 1 1 0 Prim-pol family 5 RRN3 PF05327.11 ORF99676 - 7.6 4.9 20.4 8.2 4.8 20.4 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 ORC6 PF05460.13 ORF99676 - 8.6 5.5 14.8 11 5.2 14.8 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) RNA_pol_Rpc4 PF05132.14 ORF99676 - 9.4 6.7 12.9 12 6.3 12.9 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 Peptidase_S64 PF08192.11 ORF99676 - 9.6 4.5 13.9 10 4.5 13.9 1.0 1 0 0 1 1 1 0 Peptidase family S64 Mt_ATP-synt_B PF05405.14 ORF98993 - 0.015 14.9 2.5 0.019 14.6 2.5 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Peptidase_C1 PF00112.23 ORF98993 - 0.087 12.9 0.2 0.099 12.7 0.2 1.1 1 0 0 1 1 1 0 Papain family cysteine protease FANCI_HD2 PF14680.6 ORF98577 - 0.0045 16.3 1.5 0.0049 16.1 1.5 1.0 1 0 0 1 1 1 1 FANCI helical domain 2 Abhydrolase_2 PF02230.16 ORF98282 - 1e-13 51.6 0.0 1.1e-13 51.5 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase CNPase PF05881.12 ORF97288 - 0.1 12.2 0.1 8.8 5.8 0.0 2.0 1 1 1 2 2 2 0 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) Waikav_capsid_1 PF12264.8 ORF97288 - 0.1 12.1 0.3 0.12 11.9 0.3 1.2 1 0 0 1 1 1 0 Waikavirus capsid protein 1 HTH_Crp_2 PF13545.6 ORF96509 - 0.083 12.9 0.1 0.23 11.4 0.2 1.7 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain DUF2070 PF09843.9 ORF95793 - 3.7 5.7 7.4 3.8 5.7 7.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Cir_N PF10197.9 ORF95278 - 0.16 12.2 0.3 0.16 12.2 0.3 1.7 2 0 0 2 2 2 0 N-terminal domain of CBF1 interacting co-repressor CIR NIF PF03031.18 ORF94265 - 1.7e-07 31.1 0.0 3.6e-07 30.1 0.0 1.5 1 1 1 2 2 2 1 NLI interacting factor-like phosphatase MCPsignal PF00015.21 ORF94079 - 0.016 15.0 1.2 0.019 14.8 1.2 1.2 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DASH_Duo1 PF08651.10 ORF94079 - 0.022 14.5 2.3 0.052 13.3 1.1 1.8 1 1 0 1 1 1 0 DASH complex subunit Duo1 NAAA-beta PF15508.6 ORF94079 - 0.029 14.7 3.6 0.48 10.8 2.8 2.5 1 1 1 2 2 2 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase IL32 PF15225.6 ORF94079 - 0.056 13.8 1.9 0.082 13.3 1.9 1.3 1 0 0 1 1 1 0 Interleukin 32 APG17 PF04108.12 ORF94079 - 0.058 12.5 1.5 0.061 12.4 1.5 1.1 1 0 0 1 1 1 0 Autophagy protein Apg17 PhageMin_Tail PF10145.9 ORF94079 - 0.08 12.8 1.5 0.09 12.6 1.5 1.1 1 0 0 1 1 1 0 Phage-related minor tail protein DUF948 PF06103.11 ORF94079 - 0.11 12.7 9.0 0.56 10.5 8.1 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) NCD2 PF04905.13 ORF94079 - 0.27 11.2 6.6 0.38 10.7 6.6 1.3 1 0 0 1 1 1 0 NAB conserved region 2 (NCD2) COG2 PF06148.11 ORF94079 - 0.31 11.1 6.6 0.39 10.8 6.6 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Goodbye PF17109.5 ORF94079 - 0.55 10.7 2.7 4.7 7.7 2.7 2.1 1 1 0 1 1 1 0 fungal STAND N-terminal Goodbye domain ArsA_ATPase PF02374.15 ORF94079 - 0.67 9.1 9.8 0.91 8.6 9.8 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase Bac_thur_toxin PF01338.18 ORF94079 - 1.5 8.2 9.9 2.2 7.7 9.6 1.4 1 1 0 1 1 1 0 Bacillus thuringiensis toxin phiKZ_IP PF12699.7 ORF94079 - 2.6 7.1 8.2 4.3 6.4 8.2 1.4 1 1 0 1 1 1 0 phiKZ-like phage internal head proteins MRPL52 PF18699.1 ORF94079 - 5.8 7.2 7.9 12 6.2 7.9 1.6 1 1 0 1 1 1 0 Mitoribosomal protein mL52 Imm5 PF14423.6 ORF94079 - 6.6 6.9 6.8 8.4 6.6 6.8 1.1 1 0 0 1 1 1 0 Immunity protein Imm5 Nup54 PF13874.6 ORF94079 - 7.2 6.7 9.5 19 5.4 9.5 1.7 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 DUF5360 PF17314.2 ORF93885 - 0.0093 16.0 0.8 0.012 15.7 0.8 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5360) DUF2207 PF09972.9 ORF93885 - 0.12 11.1 1.5 0.13 11.0 1.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5563 PF17718.1 ORF92508 - 0.049 13.2 1.0 0.052 13.1 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5563) M-inducer_phosp PF06617.13 ORF92205 - 0.0046 16.3 0.3 0.0046 16.3 0.3 1.1 1 0 0 1 1 1 1 M-phase inducer phosphatase PBECR4 PF18813.1 ORF92205 - 0.015 15.5 1.5 0.018 15.3 1.5 1.0 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4 FAM165 PF14981.6 ORF92059 - 0.099 12.5 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 FAM165 family DUF1280 PF06918.14 ORF91751 - 0.035 13.7 2.9 0.042 13.4 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1280) Fib_alpha PF08702.10 ORF91751 - 0.042 14.0 6.5 0.032 14.4 4.5 1.7 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Tropomyosin PF00261.20 ORF91751 - 0.064 12.6 6.5 0.11 11.8 6.5 1.5 1 1 0 1 1 1 0 Tropomyosin DUF2730 PF10805.8 ORF91751 - 0.2 11.8 4.1 0.1 12.7 2.4 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) TolA_bind_tri PF16331.5 ORF91751 - 0.37 10.9 6.4 0.13 12.3 2.2 2.1 2 0 0 2 2 2 0 TolA binding protein trimerisation DUF1664 PF07889.12 ORF91751 - 0.66 10.0 8.0 0.6 10.1 6.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Gln-synt_C-ter PF18318.1 ORF91491 - 0.011 15.5 2.5 0.014 15.2 2.5 1.2 1 0 0 1 1 1 0 Glutamine synthetase C-terminal domain Csd3_N PF18059.1 ORF91491 - 0.12 12.9 1.8 0.49 10.9 0.1 2.2 1 1 1 2 2 2 0 Csd3 N-terminal AAA_lid_2 PF17863.1 ORF90845 - 0.13 12.2 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 AAA lid domain Peptidase_S30 PF01577.16 ORF90433 - 0.036 13.7 0.4 0.048 13.3 0.1 1.4 2 0 0 2 2 2 0 Potyvirus P1 protease dUTPase PF00692.19 ORF90130 - 1e-19 70.5 0.0 1.2e-19 70.2 0.0 1.1 1 0 0 1 1 1 1 dUTPase ECM11 PF15463.6 ORF89875 - 0.0069 17.0 2.0 0.0093 16.5 2.0 1.2 1 0 0 1 1 1 1 Extracellular mutant protein 11 DUF883 PF05957.13 ORF89875 - 0.011 16.3 1.4 0.015 15.8 1.4 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Elongin_A PF06881.11 ORF89875 - 0.056 14.0 0.8 0.34 11.5 0.4 2.0 1 1 1 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A HAUS6_N PF14661.6 ORF89875 - 0.082 12.5 2.2 0.09 12.3 2.2 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Dicistro_VP4 PF11492.8 ORF88754 - 0.16 11.9 0.7 1.7 8.7 0.1 2.2 1 1 1 2 2 2 0 Cricket paralysis virus, VP4 Mito_carr PF00153.27 ORF88647 - 4e-17 61.9 0.0 4.9e-17 61.6 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein TIG PF01833.24 ORF88322 - 0.061 13.4 0.1 0.078 13.1 0.1 1.3 1 0 0 1 1 1 0 IPT/TIG domain DUF728 PF05304.12 ORF88014 - 0.025 14.4 0.1 0.033 14.0 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF728) SCFA_trans PF02667.14 ORF87741 - 0.047 12.7 0.0 0.057 12.4 0.0 1.1 1 0 0 1 1 1 0 Short chain fatty acid transporter AAA_21 PF13304.6 ORF86921 - 1.2e-09 38.4 0.0 1.4e-09 38.2 0.0 1.0 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF86921 - 1.4e-07 32.1 0.0 2.3e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_15 PF13175.6 ORF86921 - 0.0033 17.2 0.0 0.0038 17.0 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain RNA_pol_Rpb5_N PF03871.14 ORF86921 - 0.095 13.3 0.0 0.11 13.1 0.0 1.3 1 1 0 1 1 1 0 RNA polymerase Rpb5, N-terminal domain SMC_N PF02463.19 ORF86921 - 0.12 11.8 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Phage_holin_5_1 PF06946.11 ORF86527 - 0.13 12.6 0.4 0.2 12.1 0.4 1.3 1 0 0 1 1 1 0 Bacteriophage A118-like holin, Hol118 TAP35_44 PF07265.11 ORF86527 - 0.24 11.4 1.4 0.3 11.1 1.4 1.2 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 Cytochrom_C PF00034.21 ORF85815 - 4.1e-08 34.2 0.0 7.2e-08 33.5 0.0 1.4 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF85815 - 1.7e-06 28.3 0.3 5.5e-06 26.6 0.3 1.8 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Ish1 PF10281.9 ORF85815 - 0.007 16.6 3.2 0.48 10.8 1.9 2.5 2 0 0 2 2 2 2 Putative stress-responsive nuclear envelope protein Helicase_C_4 PF13871.6 ORF85554 - 0.099 12.3 0.2 0.15 11.7 0.1 1.3 1 1 0 1 1 1 0 C-terminal domain on Strawberry notch homologue DctM PF06808.12 ORF85540 - 9.3e-27 93.9 14.2 1e-26 93.8 14.2 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component CitMHS PF03600.16 ORF85540 - 9.5e-07 28.3 13.0 1.1e-06 28.1 13.0 1.0 1 0 0 1 1 1 1 Citrate transporter EutH PF04346.12 ORF85540 - 0.18 10.9 11.0 0.28 10.3 11.0 1.3 1 1 0 1 1 1 0 Ethanolamine utilisation protein, EutH DcuC PF03606.15 ORF85540 - 0.23 9.9 7.0 0.35 9.3 7.0 1.3 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier Mito_carr PF00153.27 ORF85495 - 8.1e-15 54.5 0.6 1.5e-14 53.6 0.0 1.6 2 0 0 2 2 2 1 Mitochondrial carrier protein Rep_Org_C PF06926.11 ORF85355 - 0.058 13.7 4.0 0.082 13.2 4.0 1.3 1 1 0 1 1 1 0 Putative replisome organiser protein C-terminus MORN PF02493.20 ORF84984 - 7.6e-11 41.3 10.3 8.1e-05 22.3 0.1 3.6 3 1 0 3 3 3 3 MORN repeat Aminotran_1_2 PF00155.21 ORF84259 - 0.14 11.3 0.0 0.15 11.2 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II Thioredoxin PF00085.20 ORF84107 - 0.041 13.9 0.0 0.057 13.4 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin DUF872 PF05915.12 ORF83023 - 1.7 8.9 8.0 2.9 8.1 8.0 1.6 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Pex24p PF06398.11 ORF83023 - 4.3 6.2 8.5 5.3 5.9 8.5 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin K1 PF02960.14 ORF82401 - 0.092 12.9 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 K1 glycoprotein MDFI PF15316.6 ORF82401 - 0.51 10.4 3.0 0.62 10.1 3.0 1.2 1 0 0 1 1 1 0 MyoD family inhibitor FH2 PF02181.23 ORF82146 - 0.015 14.4 0.1 0.018 14.2 0.1 1.1 1 0 0 1 1 1 0 Formin Homology 2 Domain PRE_C2HC PF07530.11 ORF81860 - 0.1 12.7 0.3 2.1 8.5 0.0 2.3 2 1 0 2 2 2 0 Associated with zinc fingers PTS_2-RNA PF01885.16 ORF81860 - 0.14 12.2 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family STAT_alpha PF01017.20 ORF81285 - 0.028 14.3 0.7 0.036 14.0 0.7 1.1 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF2681 PF10883.8 ORF81268 - 0.024 15.1 0.1 0.029 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) HMG_box_2 PF09011.10 ORF80282 - 0.0033 18.0 0.3 0.0033 18.0 0.3 2.4 2 1 0 2 2 2 1 HMG-box domain YABBY PF04690.13 ORF80282 - 0.2 12.2 7.7 0.25 11.9 7.7 1.2 1 0 0 1 1 1 0 YABBY protein DUF3807 PF12720.7 ORF80282 - 4.6 7.5 15.7 5.8 7.1 15.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) ALMT PF11744.8 ORF80282 - 4.9 5.9 8.1 5.4 5.7 8.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter NPR3 PF03666.13 ORF80282 - 6.1 5.5 14.0 6.9 5.3 14.0 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 U79_P34 PF03064.16 ORF80282 - 8.4 5.7 19.4 11 5.3 19.4 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Zip PF02535.22 ORF80282 - 8.7 5.4 6.9 9 5.4 6.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF5094 PF17015.5 ORF80282 - 9.5 6.3 13.9 14 5.7 13.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5094) KLRAQ PF10205.9 ORF78456 - 0.042 14.1 0.2 0.042 14.1 0.2 1.5 2 0 0 2 2 2 0 Predicted coiled-coil domain-containing protein Tubulin_C PF03953.17 ORF78375 - 3.5e-23 82.1 0.0 4.1e-23 81.9 0.0 1.1 1 0 0 1 1 1 1 Tubulin C-terminal domain NepR PF18557.1 ORF78363 - 0.15 11.7 0.4 0.23 11.1 0.4 1.3 1 0 0 1 1 1 0 Anti-sigma factor NepR DUF3310 PF11753.8 ORF78289 - 0.086 13.0 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknwon function (DUF3310) DUF5389 PF17364.2 ORF77845 - 0.031 14.3 1.0 0.035 14.2 1.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5389) Pro_isomerase PF00160.21 ORF77245 - 7.7e-17 62.0 0.0 8.5e-17 61.9 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AAA_5 PF07728.14 ORF77222 - 0.13 12.2 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PRA-CH PF01502.18 ORF77058 - 1.2e-18 66.7 0.1 1.6e-18 66.3 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase Etmic-2 PF06670.11 ORF77058 - 0.065 12.2 0.0 0.074 12.0 0.0 1.0 1 0 0 1 1 1 0 Microneme protein Etmic-2 TRP PF06011.12 ORF76787 - 0.015 14.0 8.9 0.017 13.9 8.9 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF1870 PF08965.10 ORF76787 - 0.023 14.7 0.2 0.031 14.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1870) ISK_Channel PF02060.15 ORF76787 - 0.27 11.0 6.0 0.19 11.5 0.3 2.1 1 1 1 2 2 2 0 Slow voltage-gated potassium channel GPR15L PF15854.5 ORF76462 - 0.25 11.6 2.1 0.63 10.3 2.1 1.7 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 DUF2070 PF09843.9 ORF76462 - 3.1 6.0 13.3 3.4 5.9 13.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) CAP_N PF01213.19 ORF75930 - 0.21 11.0 4.2 0.18 11.3 4.2 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 ORF75930 - 0.57 10.2 5.7 0.57 10.2 5.7 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator PRIMA1 PF16101.5 ORF75930 - 7.5 6.6 11.1 12 6.0 11.1 1.4 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Phe_ZIP PF08916.11 ORF75234 - 0.019 15.7 0.1 0.035 14.8 0.1 1.5 1 1 0 1 1 1 0 Phenylalanine zipper DUF1216 PF06746.11 ORF74788 - 0.0088 16.1 3.9 0.01 15.9 3.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1216) D5_N PF08706.11 ORF74788 - 0.1 12.9 0.9 0.12 12.6 0.9 1.2 1 0 0 1 1 1 0 D5 N terminal like IL7 PF01415.16 ORF74300 - 0.14 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Interleukin 7/9 family CHASE9 PF17153.4 ORF74265 - 0.029 14.5 0.3 0.038 14.1 0.3 1.4 1 1 0 1 1 1 0 Periplasmic sensor domain, extracellular Thioredoxin_4 PF13462.6 ORF74068 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin SeqA_N PF17206.3 ORF73826 - 0.14 11.5 0.1 0.37 10.1 0.0 1.7 2 0 0 2 2 2 0 SeqA protein N-terminal domain Globin PF00042.22 ORF738 - 1.4e-07 32.0 0.0 2.3e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Globin DNA_ligase_C PF17879.1 ORF738 - 0.00068 19.7 0.0 0.00088 19.3 0.0 1.2 1 0 0 1 1 1 1 DNA ligase C-terminal domain DUF1117 PF06547.12 ORF72962 - 0.018 15.6 0.2 0.023 15.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) V_ATPase_I PF01496.19 ORF72907 - 1e-34 119.6 2.1 1.2e-34 119.4 2.1 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family EmrE PF13536.6 ORF72253 - 0.047 13.3 0.0 0.048 13.2 0.0 1.1 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter Ank_2 PF12796.7 ORF71320 - 1.9e-07 31.5 0.0 1.5e-06 28.7 0.0 1.9 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF71320 - 3e-07 30.6 0.0 0.00012 22.2 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF71320 - 1e-06 29.2 0.0 0.00027 21.4 0.0 2.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF71320 - 0.00024 21.3 0.1 0.17 12.6 0.0 3.4 4 0 0 4 4 4 1 Ankyrin repeat Ank PF00023.30 ORF71320 - 0.0013 19.1 0.1 0.26 11.8 0.0 2.9 3 0 0 3 3 3 1 Ankyrin repeat LUC7 PF03194.15 ORF70035 - 0.097 12.3 0.2 0.13 11.9 0.2 1.1 1 0 0 1 1 1 0 LUC7 N_terminus PRE_C2HC PF07530.11 ORF69286 - 0.1 12.7 0.3 2.1 8.5 0.0 2.3 2 1 0 2 2 2 0 Associated with zinc fingers PTS_2-RNA PF01885.16 ORF69286 - 0.14 12.2 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Pkinase PF00069.25 ORF68287 - 0.0072 15.7 0.1 0.0084 15.5 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF68287 - 0.028 13.7 0.1 0.035 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF67269 - 9.2e-11 42.0 8.4 8.5e-07 29.3 1.2 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF67269 - 5.4e-09 36.2 0.1 8.4e-09 35.6 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF67269 - 5e-08 31.9 1.3 1.1e-05 24.6 0.1 3.2 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF67269 - 2.2e-06 27.1 0.2 2.2e-06 27.1 0.2 3.2 4 0 0 4 4 4 1 EF-hand domain EF-hand_5 PF13202.6 ORF67269 - 1e-05 24.8 0.4 1e-05 24.8 0.4 2.1 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF67269 - 0.0064 16.3 1.7 0.024 14.5 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair DUF592 PF04574.13 ORF67269 - 0.0098 15.7 1.2 0.013 15.2 1.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF592) DUF2666 PF10869.8 ORF67269 - 0.011 16.0 0.4 0.015 15.5 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2666) SPARC_Ca_bdg PF10591.9 ORF67269 - 0.012 15.9 0.6 0.015 15.6 0.6 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Ndr PF03096.14 ORF67269 - 0.14 10.8 0.0 0.15 10.7 0.0 1.0 1 0 0 1 1 1 0 Ndr family AAA_lid_2 PF17863.1 ORF6673 - 0.13 12.2 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 AAA lid domain Stomagen PF16851.5 ORF66605 - 1.2 9.2 7.9 0.12 12.4 3.3 1.7 2 0 0 2 2 2 0 Stomagen Coatomer_g_Cpla PF16381.5 ORF6563 - 1.1e-21 77.1 0.0 1.2e-21 76.9 0.0 1.0 1 0 0 1 1 1 1 Coatomer subunit gamma-1 C-terminal appendage platform Adaptin_binding PF10199.9 ORF65509 - 2.7 8.6 16.3 5.8 7.6 16.3 1.5 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 SRP-alpha_N PF04086.13 ORF65509 - 6.3 6.6 14.4 6.3 6.6 14.4 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal DUF913 PF06025.12 ORF65509 - 9.7 5.1 7.5 12 4.8 7.5 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Bse634I PF07832.11 ORF65234 - 0.11 11.9 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Cfr10I/Bse634I restriction endonuclease DUF956 PF06115.11 ORF65152 - 0.022 14.4 0.3 0.025 14.3 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF956) FKBP_C PF00254.28 ORF64173 - 3.5e-09 36.8 0.0 6.9e-09 35.9 0.0 1.5 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase RRM_1 PF00076.22 ORF63716 - 1.3e-12 47.4 0.0 2.5e-12 46.4 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PRP8_domainIV PF12134.8 ORF63716 - 0.077 12.6 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 PRP8 domain IV core CBFB_NFYA PF02045.15 ORF6350 - 1.5e-05 25.6 1.5 1.5e-05 25.6 1.5 2.0 2 0 0 2 2 2 1 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B LRR19-TM PF15176.6 ORF63362 - 0.096 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain MBOAT PF03062.19 ORF62823 - 0.0043 16.4 2.7 0.0056 16.1 2.3 1.3 1 1 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family Helicase_C_4 PF13871.6 ORF61349 - 0.099 12.3 0.2 0.15 11.7 0.1 1.3 1 1 0 1 1 1 0 C-terminal domain on Strawberry notch homologue dUTPase PF00692.19 ORF61252 - 1e-19 70.5 0.0 1.2e-19 70.2 0.0 1.1 1 0 0 1 1 1 1 dUTPase Rieske PF00355.26 ORF61055 - 7.6e-18 64.3 0.0 8.7e-18 64.1 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF61055 - 7e-12 45.2 0.0 8.2e-12 45.0 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain PTS_IIB PF02302.17 ORF60627 - 1.6e-21 76.8 1.6 1.9e-21 76.5 1.6 1.1 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF1815 PF08844.10 ORF60627 - 0.032 14.2 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) NICE-1 PF15845.5 ORF60184 - 0.022 15.5 0.6 0.033 15.0 0.6 1.5 1 1 0 1 1 1 0 Cysteine-rich C-terminal 1 family SHP PF03579.13 ORF60063 - 0.066 13.2 0.6 0.066 13.2 0.6 2.5 1 1 0 2 2 2 0 Small hydrophobic protein V-set_2 PF15910.5 ORF58373 - 0.16 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 ICOS V-set domain K_channel_TID PF07941.11 ORF58347 - 2 8.9 6.2 4.1 7.9 6.2 1.5 1 1 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain Pkinase PF00069.25 ORF57836 - 0.0072 15.7 0.1 0.0084 15.5 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57836 - 0.028 13.7 0.1 0.035 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase DNA_pack_C PF02499.15 ORF57059 - 0.021 13.8 0.4 0.024 13.6 0.4 1.1 1 0 0 1 1 1 0 Probable DNA packing protein, C-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks223.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks223.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks223.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks223.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:00:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Sec34 PF04136.15 ORF55880 - 0.02 14.7 1.5 0.11 12.3 0.5 1.9 1 1 1 2 2 2 0 Sec34-like family Protamine_like PF06382.11 ORF55880 - 0.063 13.5 0.1 0.07 13.3 0.1 1.1 1 0 0 1 1 1 0 Protamine and protamine like ThrE PF06738.12 ORF55880 - 0.36 10.2 0.1 0.47 9.8 0.1 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF1571 PF07608.11 ORF55290 - 0.14 11.6 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1571) Pkinase PF00069.25 ORF55239 - 9e-06 25.2 0.0 1.2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Abhydrolase_3 PF07859.13 ORF54950 - 4.4e-08 33.2 0.0 4.7e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold NDK PF00334.19 ORF54891 - 3.5e-19 69.2 0.0 3.9e-19 69.0 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase DUF3788 PF12663.7 ORF54891 - 0.092 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3788) PTN_MK_N PF05196.13 ORF54761 - 0.023 14.9 0.4 0.06 13.6 0.1 1.8 2 0 0 2 2 2 0 PTN/MK heparin-binding protein family, N-terminal domain DUF4751 PF15942.5 ORF54761 - 0.17 11.8 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4751) APG12 PF04110.13 ORF54551 - 3.8e-21 75.3 0.0 4.4e-21 75.1 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Beta-Casp PF10996.8 ORF54243 - 0.12 12.7 0.1 0.16 12.3 0.1 1.2 1 0 0 1 1 1 0 Beta-Casp domain DUF996 PF06195.13 ORF52664 - 0.067 13.5 3.7 0.074 13.3 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF996) DUF2300 PF10062.9 ORF52531 - 0.13 12.3 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Predicted secreted protein (DUF2300) Beta-Casp PF10996.8 ORF51758 - 0.12 12.7 0.1 0.16 12.3 0.1 1.2 1 0 0 1 1 1 0 Beta-Casp domain Tir_receptor_M PF03549.14 ORF51208 - 0.11 12.9 0.1 0.21 12.0 0.1 1.4 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) intimin-binding domain DnaJ PF00226.31 ORF51123 - 2.3e-07 30.8 0.2 4e-07 30.1 0.2 1.4 1 0 0 1 1 1 1 DnaJ domain Thioredoxin_4 PF13462.6 ORF50428 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin IlvC PF01450.19 ORF50233 - 0.04 14.2 0.2 0.21 11.9 0.0 1.9 1 1 1 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain Bac_DNA_binding PF00216.21 ORF50233 - 0.073 13.3 0.3 0.12 12.6 0.3 1.4 1 1 0 1 1 1 0 Bacterial DNA-binding protein PRIMA1 PF16101.5 ORF50110 - 0.0062 16.6 0.0 0.034 14.2 0.0 1.8 2 0 0 2 2 2 1 Proline-rich membrane anchor 1 Glutaredoxin PF00462.24 ORF49495 - 6e-14 52.0 0.0 9.1e-14 51.4 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 ORF49495 - 0.008 16.6 0.0 0.0083 16.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain GST_N_3 PF13417.6 ORF49495 - 0.017 15.5 0.0 0.027 14.9 0.0 1.3 1 1 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 ORF49495 - 0.019 15.4 0.0 0.028 14.8 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DUF953 PF06110.11 ORF49495 - 0.075 12.7 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Redoxin PF08534.10 ORF49495 - 0.14 11.9 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Redoxin Trp_leader2 PF08056.11 ORF49288 - 0.092 12.7 0.1 0.17 11.9 0.1 1.4 1 0 0 1 1 1 0 Tryptophan operon leader peptide T3SS_needle_F PF09392.10 ORF48442 - 0.54 10.5 0.0 0.54 10.5 0.0 3.1 1 1 1 2 2 2 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF Siah-Interact_N PF09032.11 ORF48442 - 4.2 7.8 14.9 49 4.3 14.9 2.4 1 1 0 1 1 1 0 Siah interacting protein, N terminal TMPIT PF07851.13 ORF48442 - 5.1 6.2 8.9 5.7 6.1 8.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF1676 PF07898.13 ORF48442 - 7.1 6.6 5.6 7.9 6.5 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) RP-C_C PF11800.8 ORF48442 - 8.7 6.4 11.1 10 6.1 11.1 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region ClpB_D2-small PF10431.9 ORF48037 - 5.1e-09 36.1 0.1 6.6e-09 35.7 0.1 1.1 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein DUF3022 PF11226.8 ORF48037 - 0.091 13.2 0.0 2.8 8.4 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3022) HALZ PF02183.18 ORF47800 - 0.031 14.5 12.1 0.037 14.3 2.9 2.5 1 1 1 2 2 2 0 Homeobox associated leucine zipper GAS PF13851.6 ORF47800 - 0.032 13.6 16.1 0.077 12.3 11.7 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding CENP-H PF05837.12 ORF47800 - 0.053 13.9 9.0 0.065 13.7 9.0 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Syntaxin-6_N PF09177.11 ORF47800 - 0.13 12.8 9.0 0.27 11.8 3.2 2.2 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Macoilin PF09726.9 ORF47800 - 0.22 10.1 9.0 0.31 9.6 9.0 1.2 1 0 0 1 1 1 0 Macoilin family Ax_dynein_light PF10211.9 ORF47800 - 0.25 11.3 14.0 0.044 13.7 9.1 1.8 1 1 1 2 2 2 0 Axonemal dynein light chain Atg14 PF10186.9 ORF47800 - 0.37 9.8 11.2 0.46 9.5 11.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 bZIP_1 PF00170.21 ORF47800 - 0.73 10.0 18.0 0.1 12.7 4.2 3.2 3 0 0 3 3 3 0 bZIP transcription factor Prefoldin PF02996.17 ORF47800 - 0.77 9.7 10.8 0.29 11.1 1.5 2.7 1 1 2 3 3 3 0 Prefoldin subunit FapA PF03961.13 ORF47800 - 0.8 8.2 13.9 0.9 8.1 13.9 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A BLOC1_2 PF10046.9 ORF47800 - 0.89 9.9 14.2 4 7.8 4.8 2.1 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Prefoldin_2 PF01920.20 ORF47800 - 0.92 9.5 17.2 0.74 9.8 2.3 3.0 1 1 2 3 3 3 0 Prefoldin subunit BRE1 PF08647.11 ORF47800 - 0.99 9.5 15.9 0.75 9.9 3.9 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase FAM76 PF16046.5 ORF47800 - 1.2 8.5 7.2 1.5 8.1 7.2 1.2 1 0 0 1 1 1 0 FAM76 protein APG6_N PF17675.1 ORF47800 - 1.3 9.5 13.6 2.5 8.6 13.6 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF4140 PF13600.6 ORF47800 - 2.4 8.7 6.3 18 5.8 0.2 2.6 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) PCRF PF03462.18 ORF47800 - 2.4 8.0 6.8 1.6 8.5 4.6 1.6 1 1 1 2 2 2 0 PCRF domain V_ATPase_I PF01496.19 ORF47800 - 2.6 5.9 7.6 2.7 5.8 7.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fib_alpha PF08702.10 ORF47800 - 2.8 8.1 14.7 3.7 7.7 14.7 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family EMP24_GP25L PF01105.24 ORF47800 - 4.6 7.1 11.8 1.4 8.8 4.0 2.0 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD FlaC_arch PF05377.11 ORF47800 - 4.9 7.6 15.2 2.1 8.8 1.3 3.0 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) DivIC PF04977.15 ORF47800 - 5.9 6.7 18.5 1 9.2 3.1 2.9 1 1 2 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF47800 - 6.9 6.3 13.6 29 4.3 13.6 1.8 1 1 0 1 1 1 0 GrpE DUF2570 PF10828.8 ORF47800 - 7.1 6.5 12.8 1.7 8.5 3.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) YDG PF18657.1 ORF46818 - 0.0072 16.5 1.3 0.011 15.9 1.3 1.2 1 0 0 1 1 1 1 YDG domain tRNA-synt_1_2 PF13603.6 ORF46598 - 0.037 13.5 0.1 0.045 13.3 0.1 1.1 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 Tad PF13400.6 ORF46140 - 0.85 10.0 3.9 17 5.8 0.0 2.4 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like E1-E2_ATPase PF00122.20 ORF46140 - 7.8 6.0 8.9 31 4.0 8.9 1.9 1 1 0 1 1 1 0 E1-E2 ATPase Sperm_Ag_HE2 PF05324.13 ORF46058 - 0.029 14.8 0.7 0.058 13.9 0.3 1.7 1 1 1 2 2 2 0 Sperm antigen HE2 BBS2_C PF14782.6 ORF45381 - 7.3e-09 34.9 0.0 7.7e-09 34.8 0.0 1.0 1 0 0 1 1 1 1 Ciliary BBSome complex subunit 2, C-terminal zf-RING_2 PF13639.6 ORF45362 - 2.2e-05 24.7 4.7 4.4e-05 23.7 4.7 1.5 1 0 0 1 1 1 1 Ring finger domain Zf_RING PF16744.5 ORF45362 - 2.6e-05 24.2 4.5 3.8e-05 23.7 4.5 1.3 1 0 0 1 1 1 1 KIAA1045 RING finger C1_1 PF00130.22 ORF45362 - 3.1e-05 23.8 5.7 5.7e-05 22.9 5.7 1.4 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD PF00628.29 ORF45362 - 6.1e-05 22.8 4.6 0.00014 21.7 4.6 1.6 1 0 0 1 1 1 1 PHD-finger Zn_ribbon_17 PF17120.5 ORF45362 - 7.2e-05 22.3 3.8 0.00013 21.6 3.8 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF45362 - 0.001 18.7 7.3 0.0022 17.7 6.8 1.9 1 1 1 2 2 2 1 RING-like zinc finger C1_2 PF03107.16 ORF45362 - 0.0029 17.9 4.5 0.0059 16.9 4.5 1.5 1 0 0 1 1 1 1 C1 domain SIR2_2 PF13289.6 ORF45362 - 0.0043 17.2 0.0 0.0049 17.0 0.0 1.2 1 0 0 1 1 1 1 SIR2-like domain Prok-RING_1 PF14446.6 ORF45362 - 0.0058 16.5 2.6 0.011 15.7 2.6 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 zf-HC5HC2H_2 PF13832.6 ORF45362 - 0.0081 16.3 4.4 0.0087 16.2 4.4 1.2 1 0 0 1 1 1 1 PHD-zinc-finger like domain zf-RING_5 PF14634.6 ORF45362 - 0.0091 15.9 5.4 0.018 15.0 5.4 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_4 PF14570.6 ORF45362 - 0.071 12.9 0.4 0.071 12.9 0.4 1.9 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain PHD_4 PF16866.5 ORF45362 - 0.32 11.1 6.1 3.6 7.7 6.1 2.2 1 1 0 1 1 1 0 PHD-finger Pro_isomerase PF00160.21 ORF45241 - 4.7e-22 79.0 0.1 5.1e-22 78.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LysM PF01476.20 ORF45180 - 7.4e-05 22.7 0.0 9.6e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 LysM domain MINDY_DUB PF04424.13 ORF45180 - 0.13 12.2 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MINDY deubiquitinase MatE PF01554.18 ORF4514 - 3.3e-17 62.6 3.9 3.5e-17 62.5 3.9 1.0 1 0 0 1 1 1 1 MatE DUF2781 PF10914.8 ORF4514 - 0.013 15.9 0.3 0.017 15.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) DUF4519 PF15012.6 ORF45073 - 0.59 10.3 1.8 1.2 9.3 1.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) Thioredoxin_4 PF13462.6 ORF44881 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin FliS PF02561.14 ORF43403 - 0.26 11.5 2.7 0.65 10.3 2.7 1.6 1 1 0 1 1 1 0 Flagellar protein FliS COesterase PF00135.28 ORF43088 - 0.015 14.2 0.0 0.015 14.2 0.0 1.1 1 0 0 1 1 1 0 Carboxylesterase family Ras PF00071.22 ORF43048 - 3.7e-17 62.4 0.2 5.5e-17 61.8 0.2 1.3 1 0 0 1 1 1 1 Ras family 2-Hacid_dh_C PF02826.19 ORF42920 - 6.1e-17 61.5 0.0 7.3e-17 61.3 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thioredoxin_4 PF13462.6 ORF42232 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin Oxidored_molyb PF00174.19 ORF4153 - 0.00012 21.7 0.0 0.00015 21.4 0.0 1.3 1 1 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Herpes_DNAp_acc PF04929.12 ORF41436 - 0.58 9.1 3.3 0.64 8.9 3.3 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Sod_Fe_C PF02777.18 ORF41301 - 2.1e-31 108.1 0.3 2.4e-31 107.9 0.3 1.1 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain NDUF_B6 PF09782.9 ORF41301 - 0.063 13.4 0.2 0.076 13.1 0.2 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit Pkinase PF00069.25 ORF40640 - 3.1e-27 95.6 0.0 3.5e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF40640 - 9.2e-15 54.6 0.0 1.1e-14 54.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF40640 - 0.001 18.0 0.0 0.0012 17.7 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF40640 - 0.0079 15.5 0.0 0.0079 15.5 0.0 1.1 1 0 0 1 1 1 1 Kinase-like FTA2 PF13095.6 ORF40640 - 0.03 14.0 0.0 0.038 13.6 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 zf-Mss51 PF13824.6 ORF40640 - 0.049 13.7 0.0 0.079 13.1 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Aldedh PF00171.22 ORF40429 - 1.3e-42 145.9 0.1 1.4e-42 145.8 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family CoA_transf_3 PF02515.17 ORF40429 - 0.2 10.7 0.0 0.22 10.6 0.0 1.0 1 0 0 1 1 1 0 CoA-transferase family III Actin PF00022.19 ORF37993 - 3.4e-21 75.4 0.0 3.8e-21 75.2 0.0 1.0 1 0 0 1 1 1 1 Actin HSP70 PF00012.20 ORF37993 - 0.27 9.4 0.0 0.31 9.1 0.0 1.1 1 0 0 1 1 1 0 Hsp70 protein MAP17 PF15807.5 ORF37847 - 2.7 8.2 6.8 3.6 7.8 6.8 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF2254 PF10011.9 ORF37827 - 0.12 11.2 1.8 0.16 10.8 1.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) MCPsignal PF00015.21 ORF36600 - 0.016 15.0 1.2 0.019 14.8 1.2 1.2 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DASH_Duo1 PF08651.10 ORF36600 - 0.022 14.5 2.3 0.052 13.3 1.1 1.8 1 1 0 1 1 1 0 DASH complex subunit Duo1 NAAA-beta PF15508.6 ORF36600 - 0.029 14.7 3.6 0.48 10.8 2.8 2.5 1 1 1 2 2 2 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase IL32 PF15225.6 ORF36600 - 0.056 13.8 1.9 0.082 13.3 1.9 1.3 1 0 0 1 1 1 0 Interleukin 32 APG17 PF04108.12 ORF36600 - 0.058 12.5 1.5 0.061 12.4 1.5 1.1 1 0 0 1 1 1 0 Autophagy protein Apg17 PhageMin_Tail PF10145.9 ORF36600 - 0.08 12.8 1.5 0.09 12.6 1.5 1.1 1 0 0 1 1 1 0 Phage-related minor tail protein DUF948 PF06103.11 ORF36600 - 0.11 12.7 9.0 0.56 10.5 8.1 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) NCD2 PF04905.13 ORF36600 - 0.27 11.2 6.6 0.38 10.7 6.6 1.3 1 0 0 1 1 1 0 NAB conserved region 2 (NCD2) COG2 PF06148.11 ORF36600 - 0.31 11.1 6.6 0.39 10.8 6.6 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Goodbye PF17109.5 ORF36600 - 0.55 10.7 2.7 4.7 7.7 2.7 2.1 1 1 0 1 1 1 0 fungal STAND N-terminal Goodbye domain ArsA_ATPase PF02374.15 ORF36600 - 0.67 9.1 9.8 0.91 8.6 9.8 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase Bac_thur_toxin PF01338.18 ORF36600 - 1.5 8.2 9.9 2.2 7.7 9.6 1.4 1 1 0 1 1 1 0 Bacillus thuringiensis toxin phiKZ_IP PF12699.7 ORF36600 - 2.6 7.1 8.2 4.3 6.4 8.2 1.4 1 1 0 1 1 1 0 phiKZ-like phage internal head proteins MRPL52 PF18699.1 ORF36600 - 5.8 7.2 7.9 12 6.2 7.9 1.6 1 1 0 1 1 1 0 Mitoribosomal protein mL52 Imm5 PF14423.6 ORF36600 - 6.6 6.9 6.8 8.4 6.6 6.8 1.1 1 0 0 1 1 1 0 Immunity protein Imm5 Nup54 PF13874.6 ORF36600 - 7.2 6.7 9.5 19 5.4 9.5 1.7 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 Ank_2 PF12796.7 ORF36273 - 2.1e-11 44.2 0.0 4.1e-11 43.3 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF36273 - 3.9e-11 43.0 0.6 5.1e-07 29.8 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF36273 - 1.4e-10 41.1 3.0 4.4e-05 23.7 0.2 3.4 3 1 1 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF36273 - 1.5e-08 35.0 0.2 8.2e-08 32.7 0.1 2.0 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF36273 - 3.1e-08 33.3 0.1 0.00023 21.4 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat TAFII55_N PF04658.13 ORF36271 - 0.0042 16.8 0.1 0.0048 16.6 0.1 1.1 1 0 0 1 1 1 1 TAFII55 protein conserved region Arm PF00514.23 ORF36271 - 0.082 13.0 0.0 10 6.3 0.0 2.4 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat TBCA PF02970.16 ORF36143 - 7.2e-10 39.1 1.2 1.6e-09 38.0 0.4 1.8 1 1 1 2 2 2 1 Tubulin binding cofactor A Phage_tail_APC PF16778.5 ORF36143 - 0.35 10.8 2.3 21 5.1 2.3 2.2 1 1 0 1 1 1 0 Phage tail assembly chaperone protein Phage_holin_5_1 PF06946.11 ORF35686 - 0.13 12.6 0.4 0.2 12.1 0.4 1.3 1 0 0 1 1 1 0 Bacteriophage A118-like holin, Hol118 TAP35_44 PF07265.11 ORF35686 - 0.24 11.4 1.4 0.3 11.1 1.4 1.2 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 Presenilin PF01080.17 ORF35614 - 1.6 7.4 8.5 1.8 7.2 8.5 1.0 1 0 0 1 1 1 0 Presenilin Sec62 PF03839.16 ORF35614 - 4.3 6.8 6.9 4.8 6.6 6.9 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 DUF4637 PF15470.6 ORF35614 - 5.2 6.8 12.7 6.2 6.5 12.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Hid1 PF12722.7 ORF35614 - 8.7 4.3 6.0 9.4 4.2 6.0 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF35614 - 8.9 6.0 11.6 10 5.9 11.6 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Cytochrom_C PF00034.21 ORF35549 - 2.6e-08 34.9 0.0 4.6e-08 34.1 0.0 1.4 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF35549 - 9.1e-07 29.1 0.3 3e-06 27.5 0.3 1.8 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Ish1 PF10281.9 ORF35549 - 0.0064 16.8 3.2 0.48 10.8 1.9 2.6 2 0 0 2 2 2 2 Putative stress-responsive nuclear envelope protein DUF3018 PF11455.8 ORF34233 - 0.0089 15.9 0.1 0.014 15.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3018) PTN_MK_N PF05196.13 ORF33728 - 0.023 14.9 0.4 0.06 13.6 0.1 1.8 2 0 0 2 2 2 0 PTN/MK heparin-binding protein family, N-terminal domain DUF4751 PF15942.5 ORF33728 - 0.17 11.8 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4751) Cytochrome-c551 PF10643.9 ORF33317 - 0.15 11.6 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 DUF2756 PF10956.8 ORF33257 - 0.029 14.9 2.4 0.029 14.9 2.4 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2756) PMP22_Claudin PF00822.20 ORF32677 - 0.036 13.9 0.1 0.04 13.8 0.1 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family SBDS_C PF09377.10 ORF32613 - 1.1e-14 54.5 0.3 1.3e-14 54.2 0.3 1.2 1 0 0 1 1 1 1 SBDS protein C-terminal domain EIF_2_alpha PF07541.12 ORF32613 - 0.0029 17.7 0.1 0.0033 17.5 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit PI3K_rbd PF00794.18 ORF32613 - 0.0077 16.4 0.2 0.0098 16.0 0.2 1.3 1 0 0 1 1 1 1 PI3-kinase family, ras-binding domain T2SSE PF00437.20 ORF32613 - 0.046 12.8 0.0 0.05 12.6 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein Dehyd-heme_bind PF09098.10 ORF32613 - 0.1 12.2 0.2 0.12 12.0 0.2 1.1 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding DUF5360 PF17314.2 ORF32333 - 0.0093 16.0 0.8 0.012 15.7 0.8 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5360) DUF2207 PF09972.9 ORF32333 - 0.12 11.1 1.5 0.13 11.0 1.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CHU_C PF13585.6 ORF3200 - 0.047 13.7 0.0 0.063 13.3 0.0 1.3 1 0 0 1 1 1 0 C-terminal domain of CHU protein family PAM2 PF07145.15 ORF3200 - 0.065 12.9 0.9 0.23 11.2 0.9 2.0 1 0 0 1 1 1 0 Ataxin-2 C-terminal region Cellulase PF00150.18 ORF31199 - 9.8e-05 21.9 1.0 0.00012 21.7 1.0 1.1 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Adhesin_P1 PF03257.13 ORF30283 - 3.2 8.3 7.3 3.1e+02 2.0 6.9 2.6 1 1 0 1 1 1 0 Mycoplasma adhesin P1 NmrA PF05368.13 ORF2972 - 1e-05 25.2 0.1 1.1e-05 25.1 0.1 1.0 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 ORF2972 - 0.016 15.1 0.0 0.019 14.8 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H-binding DapB_N PF01113.20 ORF2972 - 0.028 14.5 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus GTP_EFTU_D2 PF03144.25 ORF2971 - 8.6e-09 35.7 0.7 1.2e-08 35.2 0.7 1.2 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.6 ORF2971 - 0.023 14.6 0.5 0.03 14.2 0.5 1.3 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Pkinase PF00069.25 ORF29658 - 0.00049 19.5 0.0 0.00055 19.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DDE_Tnp_ISL3 PF01610.17 ORF29195 - 0.00071 19.4 1.4 0.00084 19.1 1.4 1.1 1 0 0 1 1 1 1 Transposase DUF1104 PF06518.11 ORF29195 - 0.11 12.9 3.3 3.1 8.2 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1104) DUF996 PF06195.13 ORF28430 - 0.067 13.5 3.7 0.074 13.3 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF996) Chi-conotoxin PF16981.5 ORF279 - 0.0011 19.2 1.1 0.67 10.2 0.2 2.5 2 0 0 2 2 2 2 chi-Conotoxin or t superfamily DUF3149 PF11346.8 ORF279 - 0.056 13.1 0.8 7.4 6.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) Helicase_C_4 PF13871.6 ORF27799 - 0.099 12.3 0.2 0.15 11.7 0.1 1.3 1 1 0 1 1 1 0 C-terminal domain on Strawberry notch homologue Hydant_A_N PF05378.13 ORF27543 - 0.031 14.0 0.3 0.044 13.5 0.2 1.3 1 1 0 1 1 1 0 Hydantoinase/oxoprolinase N-terminal region Med18 PF09637.10 ORF27543 - 0.037 13.8 0.4 0.039 13.8 0.4 1.1 1 0 0 1 1 1 0 Med18 protein DUF3953 PF13129.6 ORF27106 - 0.23 11.2 0.2 0.46 10.3 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3953) Pyr_redox_2 PF07992.14 ORF26577 - 2.2e-07 30.4 0.0 2.7e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF26577 - 0.00021 21.5 0.2 0.00035 20.7 0.2 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 ORF26577 - 0.0013 17.9 0.1 0.0018 17.4 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 ORF26577 - 0.0061 15.8 0.1 0.0083 15.4 0.1 1.1 1 0 0 1 1 1 1 Thi4 family AlaDh_PNT_C PF01262.21 ORF26577 - 0.0078 15.5 0.0 0.01 15.2 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 ORF26577 - 0.0079 15.5 0.3 0.013 14.7 0.3 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF26577 - 0.0098 14.6 0.1 0.012 14.3 0.1 1.1 1 0 0 1 1 1 1 HI0933-like protein DAO PF01266.24 ORF26577 - 0.017 14.7 0.2 0.023 14.3 0.2 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 ORF26577 - 0.057 14.0 0.1 0.085 13.4 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF26577 - 0.1 11.9 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain Lycopene_cycl PF05834.12 ORF26577 - 0.1 11.6 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 ORF26577 - 0.17 11.9 0.1 0.23 11.4 0.1 1.2 1 0 0 1 1 1 0 FAD-NAD(P)-binding PAS_4 PF08448.10 ORF2645 - 0.034 14.4 0.1 0.044 14.0 0.1 1.1 1 0 0 1 1 1 0 PAS fold U1snRNP70_N PF12220.8 ORF25476 - 0.059 14.0 1.3 0.069 13.8 1.3 1.3 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Pkinase PF00069.25 ORF25212 - 0.0072 15.7 0.1 0.0084 15.5 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF25212 - 0.028 13.7 0.1 0.035 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase SUZ PF12752.7 ORF24260 - 1.6e-09 38.3 0.4 1.6e-09 38.3 0.4 2.1 2 1 0 2 2 2 1 SUZ domain Herpes_UL17 PF04559.12 ORF24260 - 0.013 14.4 0.6 0.013 14.4 0.6 1.0 1 0 0 1 1 1 0 Herpesvirus UL17 protein FXMRP1_C_core PF12235.8 ORF24260 - 0.04 14.5 4.9 0.049 14.3 4.9 1.1 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal FAP PF07174.11 ORF24248 - 5.5 6.4 14.8 6.4 6.1 14.8 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) PROCN PF08083.11 ORF23645 - 0.15 10.8 0.1 0.17 10.6 0.1 1.0 1 0 0 1 1 1 0 PROCN (NUC071) domain Sda PF08970.10 ORF23645 - 0.3 10.9 2.2 0.37 10.6 0.4 2.0 2 1 0 2 2 2 0 Sporulation inhibitor A Oleosin PF01277.17 ORF23623 - 1.8 8.4 5.7 1.1 9.0 2.6 1.9 2 0 0 2 2 2 0 Oleosin MatE PF01554.18 ORF23294 - 7.9e-11 41.9 0.2 9.3e-11 41.6 0.2 1.1 1 0 0 1 1 1 1 MatE 4PPT_N PF17837.1 ORF22172 - 0.028 14.6 0.5 0.27 11.4 0.2 2.2 2 0 0 2 2 2 0 4'-phosphopantetheinyl transferase N-terminal domain Collagen PF01391.18 ORF22046 - 0.3 10.9 10.7 0.51 10.1 10.7 1.5 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) Keratin_2_head PF16208.5 ORF22046 - 0.46 10.6 15.8 0.51 10.5 15.8 1.1 1 0 0 1 1 1 0 Keratin type II head Sporozoite_P67 PF05642.11 ORF22046 - 1 7.4 8.7 1.1 7.3 8.7 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Flavodoxin_2 PF02525.17 ORF21382 - 3.3e-24 85.7 0.0 3.6e-24 85.6 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 ORF21382 - 0.01 15.6 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 NADPH-dependent FMN reductase UFD1 PF03152.14 ORF21215 - 0.12 11.8 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 SR-25 PF10500.9 ORF19545 - 3.5 7.2 10.6 4 7.0 10.6 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Phe_ZIP PF08916.11 ORF1875 - 0.04 14.6 0.6 5.6 7.8 0.0 2.2 2 0 0 2 2 2 0 Phenylalanine zipper Conotoxin PF02950.17 ORF1875 - 0.64 11.1 5.3 1.3 10.1 0.4 2.3 1 1 1 2 2 2 0 Conotoxin Rab3-GTPase_cat PF13890.6 ORF18383 - 0.48 10.0 4.2 0.75 9.4 4.2 1.3 1 0 0 1 1 1 0 Rab3 GTPase-activating protein catalytic subunit Pribosyltran PF00156.27 ORF17547 - 4.9e-09 35.9 0.5 7.9e-09 35.2 0.5 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 ORF17547 - 0.026 14.0 0.2 0.034 13.7 0.2 1.1 1 0 0 1 1 1 0 Phosphoribosyl transferase DUF1611 PF07755.11 ORF17547 - 0.041 13.2 0.1 0.061 12.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain FAM181 PF15238.6 ORF17340 - 0.018 14.9 0.2 0.022 14.7 0.2 1.0 1 0 0 1 1 1 0 FAM181 HTH_22 PF13309.6 ORF17318 - 0.021 14.9 0.7 0.54 10.4 0.0 2.2 2 0 0 2 2 2 0 HTH domain zf_C2H2_ZHX PF18387.1 ORF17318 - 0.13 11.9 1.3 1.9 8.2 0.3 2.3 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain DUF639 PF04842.12 ORF16925 - 0.016 14.7 0.9 0.018 14.5 0.9 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) FH2 PF02181.23 ORF16714 - 0.015 14.4 0.1 0.018 14.2 0.1 1.1 1 0 0 1 1 1 0 Formin Homology 2 Domain M-inducer_phosp PF06617.13 ORF16519 - 0.0046 16.3 0.3 0.0046 16.3 0.3 1.1 1 0 0 1 1 1 1 M-phase inducer phosphatase PBECR4 PF18813.1 ORF16519 - 0.015 15.5 1.5 0.018 15.3 1.5 1.0 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4 Sperm_Ag_HE2 PF05324.13 ORF16248 - 0.029 14.8 0.7 0.058 13.9 0.3 1.7 1 1 1 2 2 2 0 Sperm antigen HE2 NigD_C PF17415.2 ORF15892 - 0.026 14.6 0.1 0.03 14.4 0.1 1.2 1 0 0 1 1 1 0 NigD-like C-terminal beta sandwich domain FAM184 PF15665.5 ORF13756 - 1.5e-10 41.2 15.2 2e-10 40.8 15.2 1.2 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B GLTSCR1 PF15249.6 ORF13756 - 0.0096 16.3 5.1 0.012 16.0 5.1 1.3 1 0 0 1 1 1 1 Conserved region of unknown function on GLTSCR protein Nab2 PF11517.8 ORF13756 - 0.032 14.5 1.6 0.077 13.3 0.4 2.0 1 1 1 2 2 2 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) Syntaxin_2 PF14523.6 ORF13756 - 0.072 13.5 10.4 0.095 13.1 10.4 1.2 1 0 0 1 1 1 0 Syntaxin-like protein DUF2935 PF11155.8 ORF13756 - 0.21 11.9 5.0 0.53 10.6 5.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) ING PF12998.7 ORF13756 - 0.38 11.4 11.2 0.2 12.2 8.1 1.8 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding LMBR1 PF04791.16 ORF13756 - 1.1 8.1 7.0 1.2 8.0 7.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Fib_alpha PF08702.10 ORF13756 - 1.1 9.4 11.7 1.9 8.6 10.2 1.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family IMD PF08397.11 ORF13756 - 1.9 7.8 13.1 2 7.7 13.1 1.1 1 0 0 1 1 1 0 IRSp53/MIM homology domain DUF4407 PF14362.6 ORF13756 - 2.3 7.5 9.2 2.4 7.4 9.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PRP1_N PF06424.12 ORF13756 - 4.5 7.7 13.1 12 6.3 13.1 1.6 1 1 0 1 1 1 0 PRP1 splicing factor, N-terminal Syja_N PF02383.18 ORF1358 - 0.062 12.6 0.8 0.078 12.3 0.8 1.0 1 0 0 1 1 1 0 SacI homology domain KCNQ2_u3 PF16642.5 ORF1358 - 0.12 13.4 5.0 0.16 13.0 5.0 1.2 1 0 0 1 1 1 0 Unstructured region on Potassium channel subunit alpha KvLQT2 Med3 PF11593.8 ORF13413 - 0.47 9.6 2.0 0.52 9.5 2.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal PRE_C2HC PF07530.11 ORF13368 - 0.1 12.7 0.3 2.1 8.5 0.0 2.3 2 1 0 2 2 2 0 Associated with zinc fingers PTS_2-RNA PF01885.16 ORF13368 - 0.14 12.2 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Thioredoxin_4 PF13462.6 ORF12953 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin ETRAMP PF09716.10 ORF12717 - 0.047 13.7 0.1 0.082 13.0 0.1 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Zip PF02535.22 ORF12717 - 0.094 11.9 0.1 0.1 11.8 0.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter FAM181 PF15238.6 ORF12033 - 0.018 14.9 0.2 0.022 14.7 0.2 1.0 1 0 0 1 1 1 0 FAM181 DUF4372 PF14294.6 ORF11954 - 0.16 12.1 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4372) GCOM2 PF15328.6 ORF1184 - 0.029 14.7 0.2 0.032 14.6 0.2 1.1 1 0 0 1 1 1 0 Putative GRINL1B complex locus protein 2 DUF4490 PF14892.6 ORF1184 - 0.039 14.0 0.1 0.057 13.5 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4490) Helicase_C_4 PF13871.6 ORF111685 - 0.099 12.3 0.2 0.15 11.7 0.1 1.3 1 1 0 1 1 1 0 C-terminal domain on Strawberry notch homologue Phe_ZIP PF08916.11 ORF110267 - 0.04 14.6 0.6 5.6 7.8 0.0 2.2 2 0 0 2 2 2 0 Phenylalanine zipper Conotoxin PF02950.17 ORF110267 - 0.64 11.1 5.3 1.3 10.1 0.4 2.3 1 1 1 2 2 2 0 Conotoxin RsgA_GTPase PF03193.16 ORF108343 - 0.0091 15.9 0.1 0.011 15.7 0.1 1.1 1 0 0 1 1 1 1 RsgA GTPase GTP_EFTU PF00009.27 ORF108343 - 0.025 14.1 0.2 0.043 13.3 0.2 1.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain Toprim_4 PF13662.6 ORF108343 - 0.12 12.8 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 Toprim domain DUF2870 PF11069.8 ORF107855 - 0.022 15.1 2.1 0.03 14.7 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2870) FAM176 PF14851.6 ORF107855 - 0.3 10.8 3.5 0.36 10.5 3.5 1.2 1 0 0 1 1 1 0 FAM176 family Rhomboid PF01694.22 ORF107423 - 0.073 13.1 5.4 0.08 12.9 5.4 1.0 1 0 0 1 1 1 0 Rhomboid family Med11 PF10280.9 ORF105890 - 0.051 14.0 1.3 0.26 11.8 0.1 1.9 1 1 0 2 2 2 0 Mediator complex protein AAA_lid_2 PF17863.1 ORF105204 - 0.13 12.2 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 AAA lid domain DHQ_synthase PF01761.20 ORF103679 - 8.3e-16 57.9 0.0 9.9e-16 57.7 0.0 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Pkinase PF00069.25 ORF103565 - 3.1e-27 95.6 0.0 3.5e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF103565 - 9.2e-15 54.6 0.0 1.1e-14 54.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF103565 - 0.001 18.0 0.0 0.0012 17.7 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF103565 - 0.0079 15.5 0.0 0.0079 15.5 0.0 1.1 1 0 0 1 1 1 1 Kinase-like FTA2 PF13095.6 ORF103565 - 0.03 14.0 0.0 0.038 13.6 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 zf-Mss51 PF13824.6 ORF103565 - 0.049 13.7 0.0 0.079 13.1 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Thioredoxin PF00085.20 ORF102914 - 1.1e-12 47.8 0.0 1.2e-12 47.7 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF102914 - 0.00047 20.4 0.2 0.17 12.3 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF102914 - 0.00057 19.8 0.0 0.00082 19.3 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF102914 - 0.0018 18.0 0.0 0.0022 17.7 0.0 1.1 1 0 0 1 1 1 1 Redoxin INCENP_ARK-bind PF03941.15 ORF101951 - 5.3e-09 35.9 0.1 1.1e-08 34.8 0.1 1.6 1 0 0 1 1 1 1 Inner centromere protein, ARK binding region Ribosomal_S21 PF01165.20 ORF101884 - 0.1 12.4 0.3 0.29 10.9 0.7 1.5 2 0 0 2 2 2 0 Ribosomal protein S21 K-cyclin_vir_C PF09080.10 ORF101884 - 0.34 11.3 2.2 0.48 10.9 2.1 1.4 1 1 0 1 1 1 0 K cyclin, C terminal Gly-rich_Ago1 PF12764.7 ORF100795 - 0.043 14.6 7.4 0.07 13.9 7.4 1.5 1 1 0 1 1 1 0 Glycine-rich region of argonaut DUF3123 PF11321.8 ORF100795 - 0.38 11.4 7.4 0.058 14.1 1.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3123) DP PF08781.10 ORF100789 - 2.5e-06 27.4 4.2 0.00022 21.1 4.2 2.0 1 1 0 1 1 1 1 Transcription factor DP SBDS_C PF09377.10 ORF100679 - 1.1e-14 54.5 0.3 1.3e-14 54.2 0.3 1.2 1 0 0 1 1 1 1 SBDS protein C-terminal domain EIF_2_alpha PF07541.12 ORF100679 - 0.0029 17.7 0.1 0.0033 17.5 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit PI3K_rbd PF00794.18 ORF100679 - 0.0077 16.4 0.2 0.0098 16.0 0.2 1.3 1 0 0 1 1 1 1 PI3-kinase family, ras-binding domain T2SSE PF00437.20 ORF100679 - 0.046 12.8 0.0 0.05 12.6 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein Dehyd-heme_bind PF09098.10 ORF100679 - 0.1 12.2 0.2 0.12 12.0 0.2 1.1 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding GpcrRhopsn4 PF10192.9 ORF100349 - 0.00023 20.6 0.8 0.00026 20.5 0.8 1.1 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain DUF5367 PF17329.2 ORF100349 - 0.037 14.1 0.1 0.052 13.7 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5367) DUF5429 PF17494.2 NODE_55258_length_313_cov_1.723022_g47324_i0forward_frame_1 - 0.072 13.1 0.9 0.1 12.7 0.9 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5429) DUF570 PF04489.13 NODE_55253_length_313_cov_1.809353_g47319_i0reverse_frame_1 - 0.035 12.7 0.1 0.039 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF570) SfsA PF03749.13 NODE_55253_length_313_cov_1.809353_g47319_i0reverse_frame_1 - 0.049 13.5 0.3 0.066 13.1 0.3 1.3 1 1 0 1 1 1 0 Sugar fermentation stimulation protein RE domain Aldedh PF00171.22 NODE_55252_length_313_cov_1.924460_g47318_i0forward_frame_1 - 1.2e-09 37.3 5.0 1.2e-09 37.2 5.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family APC_u9 PF16633.5 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.011 16.7 0.6 0.018 16.1 0.6 1.4 1 0 0 1 1 1 0 Unstructured region on APC between 1st two creatine-rich regions EBV-NA3 PF05009.12 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.04 13.4 2.0 0.046 13.3 2.0 1.0 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) TMPIT PF07851.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.061 12.6 9.4 0.071 12.3 9.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein TMF_TATA_bd PF12325.8 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.11 12.7 17.8 0.28 11.4 1.1 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Caskin-Pro-rich PF16907.5 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.11 13.0 0.4 0.16 12.5 0.4 1.2 1 0 0 1 1 1 0 Proline rich region of Caskin proteins DUF5082 PF16888.5 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.12 12.6 14.3 0.45 10.8 3.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) PCRF PF03462.18 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.14 12.0 10.6 0.17 11.8 10.6 1.1 1 0 0 1 1 1 0 PCRF domain DUF3450 PF11932.8 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.34 10.2 14.8 1 8.6 14.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FapA PF03961.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.51 8.9 10.6 0.61 8.6 10.6 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF724 PF05266.14 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.68 9.7 12.3 0.85 9.4 12.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DivIVA PF05103.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.71 10.0 13.0 1.1 9.3 13.0 1.4 1 1 0 1 1 1 0 DivIVA protein DUF1664 PF07889.12 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 1.2 9.2 9.7 6.1 6.9 3.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) YabA PF06156.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 1.4 9.6 10.8 6.4 7.5 5.9 2.2 2 0 0 2 2 2 0 Initiation control protein YabA PEP-utilisers_N PF05524.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 1.4 9.1 6.3 2.4 8.4 6.3 1.4 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal DUF4140 PF13600.6 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 1.6 9.3 8.4 2.4e+02 2.2 8.4 2.2 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DivIC PF04977.15 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 4 7.3 12.8 0.49 10.2 4.6 2.7 1 1 2 3 3 3 0 Septum formation initiator Bcr-Abl_Oligo PF09036.10 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 6.2 6.9 10.0 3.6 7.7 4.2 2.2 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain DUF2358 PF10184.9 NODE_55245_length_313_cov_2.104317_g47311_i0forward_frame_1 - 0.2 11.9 0.0 0.24 11.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2358) APC_u9 PF16633.5 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.011 16.7 0.6 0.018 16.1 0.6 1.4 1 0 0 1 1 1 0 Unstructured region on APC between 1st two creatine-rich regions EBV-NA3 PF05009.12 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.04 13.4 2.0 0.046 13.3 2.0 1.0 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) TMPIT PF07851.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.061 12.6 9.4 0.071 12.3 9.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein TMF_TATA_bd PF12325.8 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.11 12.7 17.8 0.28 11.4 1.1 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Caskin-Pro-rich PF16907.5 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.11 13.0 0.4 0.16 12.5 0.4 1.2 1 0 0 1 1 1 0 Proline rich region of Caskin proteins DUF5082 PF16888.5 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.12 12.6 14.3 0.45 10.8 3.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) PCRF PF03462.18 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.14 12.0 10.6 0.17 11.8 10.6 1.1 1 0 0 1 1 1 0 PCRF domain DUF3450 PF11932.8 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.34 10.2 14.8 1 8.6 14.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FapA PF03961.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.51 8.9 10.6 0.61 8.6 10.6 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF724 PF05266.14 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.68 9.7 12.3 0.85 9.4 12.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DivIVA PF05103.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.71 10.0 13.0 1.1 9.3 13.0 1.4 1 1 0 1 1 1 0 DivIVA protein DUF1664 PF07889.12 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 1.2 9.2 9.7 6.1 6.9 3.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) YabA PF06156.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 1.4 9.6 10.8 6.4 7.5 5.9 2.2 2 0 0 2 2 2 0 Initiation control protein YabA PEP-utilisers_N PF05524.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 1.4 9.1 6.3 2.4 8.4 6.3 1.4 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal DUF4140 PF13600.6 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 1.6 9.3 8.4 2.4e+02 2.2 8.4 2.2 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DivIC PF04977.15 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 4 7.3 12.8 0.49 10.2 4.6 2.7 1 1 2 3 3 3 0 Septum formation initiator Bcr-Abl_Oligo PF09036.10 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 6.2 6.9 10.0 3.6 7.7 4.2 2.2 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain Pkinase PF00069.25 NODE_55237_length_313_cov_2.374101_g47303_i0reverse_frame_1 - 2.2e-24 86.3 0.0 2.4e-24 86.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_55237_length_313_cov_2.374101_g47303_i0reverse_frame_1 - 2.1e-11 43.6 0.0 2.3e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 NODE_55237_length_313_cov_2.374101_g47303_i0reverse_frame_1 - 0.2 11.5 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4585 PF15232.6 NODE_55236_length_313_cov_2.377698_g47302_i0forward_frame_1 - 0.3 11.2 2.4 11 6.2 0.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4585) DUF3951 PF13131.6 NODE_55234_length_313_cov_2.543165_g47300_i0reverse_frame_1 - 0.019 15.1 0.4 0.034 14.3 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3951) NPR3 PF03666.13 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_1 - 1.8 7.3 10.8 2 7.1 10.8 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 SPX PF03105.19 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_1 - 7.1 6.4 21.3 7.7 6.3 21.3 1.0 1 0 0 1 1 1 0 SPX domain Apt1 PF10351.9 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_1 - 9.5 4.9 25.4 10 4.8 25.4 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain ADK_lid PF05191.14 NODE_55231_length_313_cov_2.737410_g47297_i0reverse_frame_1 - 0.034 14.1 0.1 0.059 13.4 0.1 1.4 1 0 0 1 1 1 0 Adenylate kinase, active site lid DUF5549 PF17703.1 NODE_55225_length_313_cov_3.341727_g47291_i0reverse_frame_1 - 0.28 10.8 9.5 0.33 10.6 9.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) Pkinase PF00069.25 NODE_55222_length_313_cov_3.402878_g47288_i0forward_frame_1 - 2.6e-22 79.4 0.0 3.2e-22 79.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_55222_length_313_cov_3.402878_g47288_i0forward_frame_1 - 8e-10 38.4 0.0 9.6e-10 38.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_55222_length_313_cov_3.402878_g47288_i0forward_frame_1 - 0.067 12.5 0.0 0.075 12.3 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Holin_BhlA PF10960.8 NODE_55221_length_313_cov_3.420863_g47287_i0forward_frame_1 - 0.054 13.5 1.8 0.12 12.4 0.7 2.0 1 1 1 2 2 2 0 BhlA holin family DUF3685 PF12452.8 NODE_55221_length_313_cov_3.420863_g47287_i0forward_frame_1 - 0.11 12.1 1.0 0.15 11.7 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) DHODB_Fe-S_bind PF10418.9 NODE_55220_length_313_cov_3.690647_g47286_i0forward_frame_1 - 0.053 13.3 0.2 0.1 12.4 0.2 1.5 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DUF2451 PF10474.9 NODE_55214_length_313_cov_22.543165_g47280_i0reverse_frame_1 - 0.032 14.0 0.2 0.038 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2451) Serinc PF03348.15 NODE_55214_length_313_cov_22.543165_g47280_i0forward_frame_1 - 0.041 12.8 0.0 0.049 12.6 0.0 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) DUF5314 PF17241.2 NODE_55212_length_313_cov_42.604317_g47278_i0forward_frame_1 - 0.0082 15.8 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5314) RRM_1 PF00076.22 NODE_55202_length_313_cov_73.532374_g47268_i0reverse_frame_1 - 6.6e-20 70.7 0.0 9.6e-20 70.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_55202_length_313_cov_73.532374_g47268_i0reverse_frame_1 - 0.025 14.7 0.1 0.04 14.0 0.1 1.6 1 1 0 1 1 1 0 RNA recognition motif UT PF03253.14 NODE_55197_length_313_cov_80.482014_g47263_i0forward_frame_1 - 0.01 15.0 0.4 0.012 14.8 0.4 1.0 1 0 0 1 1 1 0 Urea transporter AbiGi PF10899.8 NODE_55188_length_313_cov_117.931655_g47254_i0reverse_frame_1 - 0.16 11.8 0.6 0.19 11.5 0.6 1.1 1 0 0 1 1 1 0 Putative abortive phage resistance protein AbiGi, antitoxin DUF4679 PF15728.5 NODE_55187_length_313_cov_124.715827_g47253_i0reverse_frame_1 - 0.021 13.9 0.0 0.024 13.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) DUF5312 PF17239.2 NODE_55186_length_313_cov_126.111511_g47252_i0reverse_frame_1 - 0.027 12.9 0.2 0.03 12.7 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5312) Proton_antipo_M PF00361.20 NODE_55185_length_313_cov_130.820144_g47251_i0reverse_frame_1 - 0.081 12.1 3.7 0.086 12.0 3.7 1.0 1 0 0 1 1 1 0 Proton-conducting membrane transporter SARS_3b PF12383.8 NODE_55180_length_313_cov_146.316547_g47246_i0forward_frame_1 - 0.061 13.5 0.6 0.098 12.8 0.3 1.5 1 1 0 1 1 1 0 Severe acute respiratory syndrome coronavirus 3b protein RCC1_2 PF13540.6 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.00051 19.8 2.7 0.35 10.7 0.2 2.6 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.062 13.4 0.1 5.3 7.1 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 DpnD-PcfM PF14207.6 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.069 13.0 0.2 39 4.2 0.0 3.0 3 0 0 3 3 3 0 DpnD/PcfM-like protein Cyclophil_like PF04126.13 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.074 12.9 0.0 5.9 6.7 0.0 2.0 1 1 1 2 2 2 0 Cyclophilin-like Methyltransf_29 PF03141.16 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.12 10.9 0.2 9.7 4.6 0.0 2.7 3 0 0 3 3 3 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Phage_holin_7_1 PF16081.5 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.16 12.2 8.4 0.92 9.7 0.5 2.7 1 1 2 3 3 3 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family PheRS_DBD2 PF18554.1 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.5 10.4 14.4 4.5 7.3 0.9 3.2 3 0 0 3 3 3 0 PheRS DNA binding domain 2 Sel_put PF04328.13 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_1 - 0.00012 22.0 16.3 0.0091 16.0 3.6 2.3 2 0 0 2 2 2 2 Selenoprotein, putative CAMSAP_CC1 PF17095.5 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_1 - 0.013 15.4 3.7 1.2 9.1 0.1 2.9 3 0 0 3 3 3 0 Spectrin-binding region of Ca2+-Calmodulin Dickkopf_N PF04706.12 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_1 - 0.14 12.6 3.8 5.3 7.6 0.5 2.3 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region XRCC4 PF06632.12 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_1 - 2.2 7.0 3.9 2 7.2 0.6 1.7 1 1 1 2 2 2 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 Acyl-CoA_dh_1 PF00441.24 NODE_55162_length_314_cov_1.275986_g47228_i0forward_frame_1 - 4.9e-19 69.0 0.1 5.4e-19 68.9 0.1 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Unpaired PF15972.5 NODE_55157_length_314_cov_1.491039_g47223_i0reverse_frame_1 - 0.017 14.7 0.3 0.02 14.5 0.3 1.1 1 0 0 1 1 1 0 Unpaired protein DUF4173 PF13777.6 NODE_55150_length_314_cov_1.706093_g47216_i0reverse_frame_1 - 0.021 14.3 0.5 0.021 14.3 0.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4173) DctQ PF04290.12 NODE_55147_length_314_cov_1.781362_g47213_i0forward_frame_1 - 7e-27 93.9 4.1 7.6e-27 93.8 4.1 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporters, DctQ component Baculo_VP91_N PF08475.10 NODE_55145_length_314_cov_1.810036_g47211_i0reverse_frame_1 - 0.055 13.2 2.4 0.074 12.7 2.4 1.1 1 0 0 1 1 1 0 Viral capsid protein 91 N-terminal APA3_viroporin PF11289.8 NODE_55144_length_314_cov_1.989247_g47210_i0reverse_frame_1 - 0.17 11.4 0.4 0.16 11.5 0.4 1.2 1 0 0 1 1 1 0 Coronavirus accessory protein 3a SlpA PF03217.14 NODE_55135_length_314_cov_2.344086_g47201_i0forward_frame_1 - 0.043 14.4 2.9 0.092 13.4 2.9 1.5 1 0 0 1 1 1 0 Surface later protein A domain DUF4865 PF16157.5 NODE_55135_length_314_cov_2.344086_g47201_i0forward_frame_1 - 0.056 13.4 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4865) Xan_ur_permease PF00860.20 NODE_55128_length_314_cov_2.677419_g47194_i0forward_frame_1 - 1.5e-22 79.9 8.5 1.7e-22 79.7 8.5 1.0 1 0 0 1 1 1 1 Permease family Ank_2 PF12796.7 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 1e-12 48.4 0.1 1.2e-09 38.6 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 1.6e-10 41.0 0.0 7.9e-05 22.9 0.0 2.3 2 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 7.9e-10 39.1 0.0 0.0018 18.8 0.0 3.0 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 6.4e-09 35.9 0.3 0.00076 19.8 0.0 3.1 3 1 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 2.5e-07 30.5 0.2 0.024 15.1 0.0 3.3 4 0 0 4 4 4 2 Ankyrin repeat Molybdop_Fe4S4 PF04879.16 NODE_55125_length_314_cov_2.738351_g47191_i0reverse_frame_1 - 0.00018 21.4 0.0 0.00025 21.0 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Nitr_red_alph_N PF14710.6 NODE_55125_length_314_cov_2.738351_g47191_i0reverse_frame_1 - 0.00088 19.7 7.2 0.0009 19.6 5.7 1.9 2 0 0 2 2 2 1 Respiratory nitrate reductase alpha N-terminal DUF4992 PF16383.5 NODE_55123_length_314_cov_2.777778_g47189_i0reverse_frame_1 - 0.0015 18.1 0.1 0.0018 17.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function SF3A3 PF16837.5 NODE_55123_length_314_cov_2.777778_g47189_i0reverse_frame_1 - 0.032 14.7 0.1 0.042 14.4 0.1 1.3 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 DUF2644 PF10841.8 NODE_55122_length_314_cov_2.831541_g47188_i0forward_frame_1 - 0.11 12.8 1.2 0.17 12.1 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) TB2_DP1_HVA22 PF03134.19 NODE_55121_length_314_cov_2.910394_g47187_i0reverse_frame_1 - 0.083 12.8 6.6 1.1 9.3 2.2 2.1 2 0 0 2 2 2 0 TB2/DP1, HVA22 family Arc_C PF18162.1 NODE_55119_length_314_cov_3.107527_g47185_i0reverse_frame_1 - 0.017 15.0 0.0 0.022 14.6 0.0 1.2 1 0 0 1 1 1 0 Arc C-lobe DUF3083 PF11281.8 NODE_55119_length_314_cov_3.107527_g47185_i0reverse_frame_1 - 0.096 12.0 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3083) TPR_22 PF18833.1 NODE_55117_length_314_cov_3.415771_g47183_i0forward_frame_1 - 0.02 15.0 0.3 0.034 14.3 0.3 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat DPM3 PF08285.11 NODE_55113_length_314_cov_3.691756_g47179_i0forward_frame_1 - 0.091 13.0 3.2 0.13 12.5 3.2 1.2 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Titin_Ig-rpts PF06582.12 NODE_55107_length_314_cov_9.745520_g47173_i0reverse_frame_1 - 0.057 13.4 1.6 7.3 6.6 0.1 2.4 2 0 0 2 2 2 0 Titin repeat Cupredoxin_1 PF13473.6 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.012 15.7 1.7 0.028 14.5 1.0 1.8 1 1 1 2 2 2 0 Cupredoxin-like domain WXG100 PF06013.12 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.017 15.3 0.6 0.034 14.4 0.6 1.5 1 0 0 1 1 1 0 Proteins of 100 residues with WXG DUF3836 PF12930.7 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.02 14.7 5.1 0.024 14.4 5.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF3836) MauJ PF17419.2 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.023 14.2 0.1 0.027 14.0 0.1 1.1 1 0 0 1 1 1 0 Methylamine utilization protein MauJ DUF1525 PF07511.11 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.038 14.1 1.2 0.049 13.8 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1525) Rogdi_lz PF10259.9 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.041 13.3 2.5 0.048 13.1 2.5 1.3 1 1 0 1 1 1 0 Rogdi leucine zipper containing protein Atg14 PF10186.9 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.17 10.9 6.4 0.18 10.8 6.4 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 RPW8 PF05659.11 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.2 11.3 9.3 0.97 9.1 9.3 1.9 1 1 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 SlyX PF04102.12 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.39 11.4 5.6 19 5.9 7.0 2.1 1 1 1 2 2 2 0 SlyX DUF4140 PF13600.6 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.58 10.6 4.9 1 9.8 4.9 1.6 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) EMP24_GP25L PF01105.24 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 1.5 8.7 8.3 7.9 6.4 8.3 1.8 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD TetR_C_31 PF17940.1 NODE_55104_length_314_cov_57.867384_g47170_i0reverse_frame_1 - 0.017 15.3 0.3 0.058 13.6 0.1 1.9 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain ICAM_N PF03921.14 NODE_55103_length_314_cov_59.129032_g47169_i0reverse_frame_1 - 0.22 11.3 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain Spem1 PF15670.5 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 0.024 14.3 14.5 0.026 14.1 14.5 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF2828 PF11443.8 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 0.76 7.8 10.1 0.75 7.8 10.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) DUF1682 PF07946.14 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 1.1 8.4 13.7 1.2 8.3 13.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) EMC3_TMCO1 PF01956.16 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 3.6 7.3 7.6 4.3 7.1 7.6 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like EOS1 PF12326.8 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 4.3 7.2 6.6 5.1 7.0 6.6 1.1 1 0 0 1 1 1 0 N-glycosylation protein TT_ORF1 PF02956.14 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 8.5 4.9 19.1 7.5 5.1 19.1 1.1 1 0 0 1 1 1 0 TT viral orf 1 Presenilin PF01080.17 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 8.5 5.0 5.5 8.9 5.0 5.5 1.1 1 0 0 1 1 1 0 Presenilin Connexin PF00029.19 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 9.6 5.9 7.6 11 5.7 7.6 1.1 1 0 0 1 1 1 0 Connexin Glyco_hydro_62 PF03664.13 NODE_55092_length_314_cov_74.311828_g47158_i0forward_frame_1 - 0.086 12.1 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 62 PAP2 PF01569.21 NODE_55090_length_314_cov_77.433692_g47156_i0forward_frame_1 - 0.0049 16.6 0.8 0.0059 16.4 0.7 1.3 1 1 0 1 1 1 1 PAP2 superfamily DUF676 PF05057.14 NODE_55087_length_314_cov_84.322581_g47153_i0reverse_frame_1 - 0.12 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) DUF4672 PF15716.5 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_1 - 0.01 15.5 0.5 0.011 15.4 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) DUF3403 PF11883.8 NODE_55077_length_314_cov_143.688172_g47143_i0reverse_frame_1 - 0.0096 16.0 0.3 0.014 15.5 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3403) DUF3439 PF11921.8 NODE_55076_length_314_cov_192.770609_g47142_i0reverse_frame_1 - 0.12 12.3 0.1 0.22 11.5 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3439) DiS_P_DiS PF06750.13 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_1 - 0.019 15.1 0.3 24 5.1 0.0 3.0 3 0 0 3 3 3 0 Bacterial Peptidase A24 N-terminal domain Toxin_38 PF14866.6 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_1 - 0.32 11.3 1.7 22 5.4 0.0 2.5 2 0 0 2 2 2 0 Potassium channel toxin T_cell_tran_alt PF15128.6 NODE_55071_length_314_cov_1119.318996_g47137_i0forward_frame_1 - 1.7 8.5 3.5 3.3 7.6 1.4 2.1 2 1 0 2 2 2 0 T-cell leukemia translocation-altered TIG PF01833.24 NODE_55060_length_315_cov_1.432143_g47126_i0forward_frame_1 - 0.03 14.4 0.1 0.041 14.0 0.1 1.2 1 0 0 1 1 1 0 IPT/TIG domain DUF1775 PF07987.11 NODE_55060_length_315_cov_1.432143_g47126_i0forward_frame_1 - 0.035 14.4 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unkown function (DUF1775) YsaB PF13983.6 NODE_55060_length_315_cov_1.432143_g47126_i0forward_frame_1 - 0.11 12.8 0.4 0.2 12.0 0.3 1.5 1 1 0 1 1 1 0 YsaB-like lipoprotein zf-CCHH PF10283.9 NODE_55057_length_315_cov_1.567857_g47123_i0reverse_frame_1 - 0.13 12.3 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 PBZ domain FAM209 PF15206.6 NODE_55055_length_315_cov_1.582143_g47121_i0forward_frame_1 - 0.054 13.3 0.1 0.064 13.1 0.1 1.1 1 0 0 1 1 1 0 FAM209 family DUF3806 PF12713.7 NODE_55051_length_315_cov_1.675000_g47117_i0reverse_frame_1 - 0.11 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3806) Gram_pos_anchor PF00746.21 NODE_55050_length_315_cov_1.728571_g47116_i0forward_frame_1 - 0.52 10.3 2.0 0.66 10.0 2.0 1.2 1 0 0 1 1 1 0 LPXTG cell wall anchor motif DUF2724 PF10893.8 NODE_55046_length_315_cov_1.835714_g47112_i0forward_frame_1 - 0.0061 16.4 0.5 0.016 15.1 0.2 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2724) DEAD_2 PF06733.15 NODE_55044_length_315_cov_1.953571_g47110_i0forward_frame_1 - 0.13 11.9 3.0 0.13 11.8 3.0 1.0 1 0 0 1 1 1 0 DEAD_2 CYTL1 PF15153.6 NODE_55029_length_315_cov_2.425000_g47095_i0forward_frame_1 - 0.028 14.4 1.0 0.039 13.9 1.0 1.2 1 0 0 1 1 1 0 Cytokine-like protein 1 HTH_7 PF02796.15 NODE_55022_length_315_cov_2.850000_g47088_i0forward_frame_1 - 0.0016 18.4 0.0 0.0026 17.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase GNVR PF13807.6 NODE_55021_length_315_cov_2.932143_g47087_i0forward_frame_1 - 0.078 12.9 0.2 0.18 11.7 0.2 1.7 1 1 0 1 1 1 0 G-rich domain on putative tyrosine kinase Babuvirus_MP PF07234.11 NODE_55015_length_315_cov_7.596429_g47081_i0reverse_frame_1 - 0.11 12.7 1.0 0.15 12.3 1.0 1.2 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF1087 PF06465.13 NODE_55014_length_315_cov_22.625000_g47080_i0reverse_frame_1 - 0.2 11.7 3.2 0.32 11.0 3.2 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) DUF485 PF04341.12 NODE_55011_length_315_cov_46.482143_g47077_i0forward_frame_1 - 0.024 14.6 1.5 0.037 14.0 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF485 Phospholamban PF04272.14 NODE_55009_length_315_cov_48.250000_g47075_i0reverse_frame_1 - 0.048 13.1 2.7 0.075 12.5 2.7 1.3 1 0 0 1 1 1 0 Phospholamban DUF2457 PF10446.9 NODE_55005_length_315_cov_56.214286_g47071_i0forward_frame_1 - 3.8 6.5 7.9 4.4 6.3 7.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF543 PF04418.12 NODE_54983_length_315_cov_118.007143_g47049_i0reverse_frame_1 - 0.00046 20.1 0.1 0.00058 19.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF543) S_2TMBeta PF18153.1 NODE_54982_length_315_cov_122.696429_g47048_i0reverse_frame_1 - 0.12 12.1 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain SBD_N PF07005.11 NODE_54975_length_315_cov_218.689286_g47041_i0reverse_frame_1 - 2 8.1 6.0 0.71 9.6 3.6 1.4 1 1 0 1 1 1 0 Sugar-binding N-terminal domain PgaD PF13994.6 NODE_54972_length_315_cov_1813.864286_g47039_i0reverse_frame_1 - 1.4 9.0 4.7 1.8 8.6 4.7 1.2 1 0 0 1 1 1 0 PgaD-like protein DUF3482 PF11981.8 NODE_54970_length_315_cov_19794.128571_g47037_i0forward_frame_1 - 0.0075 15.7 5.6 0.0086 15.5 5.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) Colipase PF01114.18 NODE_54966_length_316_cov_1.206406_g47033_i0forward_frame_2 - 0.22 11.2 2.3 0.34 10.6 2.3 1.4 1 0 0 1 1 1 0 Colipase, N-terminal domain US6 PF17616.2 NODE_54964_length_316_cov_1.451957_g47031_i0reverse_frame_3 - 0.095 12.7 1.1 0.12 12.3 1.1 1.1 1 0 0 1 1 1 0 Viral unique short region 6 Plant_zn_clust PF10533.9 NODE_54963_length_316_cov_1.491103_g47030_i0reverse_frame_3 - 0.56 10.2 7.9 0.94 9.5 7.9 1.3 1 0 0 1 1 1 0 Plant zinc cluster domain Thioredoxin_13 PF18401.1 NODE_54960_length_316_cov_1.583630_g47027_i0reverse_frame_2 - 0.17 11.8 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Sulfatase PF00884.23 NODE_54957_length_316_cov_1.679715_g47024_i0reverse_frame_2 - 1.4e-11 44.4 0.0 1.6e-11 44.2 0.0 1.1 1 0 0 1 1 1 1 Sulfatase LigB PF02900.18 NODE_54957_length_316_cov_1.679715_g47024_i0forward_frame_2 - 0.055 12.5 0.0 0.088 11.9 0.0 1.3 1 1 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase DUF5396 PF17374.2 NODE_54956_length_316_cov_1.693950_g47023_i0reverse_frame_2 - 0.046 11.6 0.0 0.05 11.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5396) Glyco_transf_22 PF03901.17 NODE_54956_length_316_cov_1.693950_g47023_i0forward_frame_2 - 0.0019 17.5 1.1 0.0021 17.4 1.1 1.0 1 0 0 1 1 1 1 Alg9-like mannosyltransferase family BclA_C PF18573.1 NODE_54956_length_316_cov_1.693950_g47023_i0forward_frame_2 - 0.045 13.7 0.0 0.079 12.9 0.0 1.4 1 0 0 1 1 1 0 BclA C-terminal domain CAAX_1 PF15895.5 NODE_54955_length_316_cov_1.711744_g47022_i0forward_frame_2 - 0.017 15.1 0.4 0.019 14.9 0.4 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 MMS22L_C PF14911.6 NODE_54948_length_316_cov_1.964413_g47015_i0reverse_frame_2 - 0.031 13.3 2.5 0.034 13.2 2.3 1.3 1 1 0 1 1 1 0 S-phase genomic integrity recombination mediator, C-terminal DsrC PF04358.13 NODE_54948_length_316_cov_1.964413_g47015_i0reverse_frame_2 - 0.072 13.6 0.8 0.085 13.4 0.8 1.1 1 0 0 1 1 1 0 DsrC like protein tRNA-synt_2c PF01411.19 NODE_54947_length_316_cov_2.056940_g47014_i0reverse_frame_3 - 4.4e-29 101.4 0.2 4.7e-29 101.3 0.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) MtrB_PioB PF11854.8 NODE_54947_length_316_cov_2.056940_g47014_i0forward_frame_3 - 0.21 9.9 0.0 0.24 9.7 0.0 1.1 1 0 0 1 1 1 0 Putative outer membrane beta-barrel porin, MtrB/PioB LRR_8 PF13855.6 NODE_54944_length_316_cov_2.145907_g47011_i0reverse_frame_3 - 0.03 14.1 1.1 0.39 10.5 0.4 2.2 2 0 0 2 2 2 0 Leucine rich repeat LRR_4 PF12799.7 NODE_54944_length_316_cov_2.145907_g47011_i0reverse_frame_3 - 0.24 11.9 4.2 0.34 11.4 1.7 2.3 2 0 0 2 2 2 0 Leucine Rich repeats (2 copies) Nmad3 PF18754.1 NODE_54943_length_316_cov_2.209964_g47010_i0forward_frame_2 - 0.041 13.4 0.0 0.052 13.1 0.0 1.1 1 0 0 1 1 1 0 Nucleotide modification associated domain 3 NICE-1 PF15845.5 NODE_54939_length_316_cov_2.441281_g47006_i0forward_frame_3 - 0.12 13.2 7.6 0.15 12.8 7.6 1.2 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks224.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks224.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks224.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks224.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1053 PF06327.14 NODE_54938_length_316_cov_2.469751_g47005_i0forward_frame_2 - 0.038 14.5 1.3 0.049 14.2 0.6 1.5 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) PTS_EIIB PF00367.20 NODE_54935_length_316_cov_2.572954_g47002_i0reverse_frame_2 - 2.9 7.5 6.4 15 5.2 0.1 2.3 2 0 0 2 2 2 0 phosphotransferase system, EIIB Tau95_N PF17682.1 NODE_54934_length_316_cov_2.693950_g47001_i0forward_frame_2 - 0.024 14.8 0.6 0.031 14.5 0.6 1.1 1 0 0 1 1 1 0 Tau95 Triple barrel domain HTH_AraC PF00165.23 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 5.7e-05 23.1 0.0 0.00011 22.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_11 PF08279.12 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 0.00069 19.5 0.0 0.0077 16.2 0.0 2.1 2 0 0 2 2 2 1 HTH domain HTH_Tnp_ISL3 PF13542.6 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 0.0022 17.4 0.1 0.0032 16.8 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_18 PF12833.7 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 0.013 15.7 0.4 0.13 12.5 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Mga PF08280.11 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 0.13 12.3 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain GTP_EFTU PF00009.27 NODE_54922_length_316_cov_4.145907_g46989_i0reverse_frame_2 - 1e-17 64.3 0.0 1.2e-17 64.1 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_54922_length_316_cov_4.145907_g46989_i0reverse_frame_2 - 0.00019 21.5 0.0 0.00025 21.1 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 NODE_54922_length_316_cov_4.145907_g46989_i0reverse_frame_2 - 0.019 14.4 0.1 0.039 13.4 0.1 1.7 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit MerE PF05052.12 NODE_54922_length_316_cov_4.145907_g46989_i0reverse_frame_2 - 0.15 12.0 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 MerE protein A2M PF00207.22 NODE_54921_length_316_cov_4.373665_g46988_i0forward_frame_2 - 0.15 11.9 0.2 0.22 11.4 0.2 1.3 1 0 0 1 1 1 0 Alpha-2-macroglobulin family TMEM239 PF15841.5 NODE_54921_length_316_cov_4.373665_g46988_i0forward_frame_2 - 0.35 10.8 2.3 0.46 10.4 2.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 239 family HMG_box PF00505.19 NODE_54919_length_316_cov_12.042705_g46986_i0reverse_frame_3 - 0.0098 16.3 0.0 0.015 15.7 0.0 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box TPR_1 PF00515.28 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 8.3e-07 28.6 0.1 2.2e-05 24.1 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 1.8e-06 27.6 0.0 9.9e-05 22.2 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 1.1e-05 25.1 0.0 0.015 15.0 0.0 2.3 1 1 1 2 2 2 2 TPR repeat TPR_9 PF13371.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 5.8e-05 23.2 0.0 7.6e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat NARP1 PF12569.8 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.00022 20.3 0.4 0.00022 20.3 0.4 1.1 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 TPR_15 PF13429.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.00053 19.3 0.0 0.00076 18.8 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.0011 19.0 2.3 0.0019 18.3 0.0 2.3 3 0 0 3 3 2 1 Tetratricopeptide repeat Spore_III_AB PF09548.10 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.017 15.3 0.3 0.034 14.3 0.1 1.5 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) TPR_19 PF14559.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.018 15.5 0.0 0.029 14.9 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.032 15.0 0.0 3.4 8.7 0.0 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.045 14.4 0.0 0.075 13.7 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.065 13.6 0.0 1.8 9.1 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.081 13.6 0.0 25 5.8 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat STAC2_u1 PF16664.5 NODE_54914_length_316_cov_50.633452_g46981_i0forward_frame_2 - 2.8 8.4 10.3 3.8 8.0 10.3 1.2 1 0 0 1 1 1 0 Unstructured on SH3 and cysteine-rich domain-containing protein 2 RNA_polI_A34 PF08208.11 NODE_54914_length_316_cov_50.633452_g46981_i0forward_frame_2 - 3.3 7.7 25.9 4.1 7.4 25.9 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Nucleo_P87 PF07267.11 NODE_54914_length_316_cov_50.633452_g46981_i0forward_frame_2 - 5.7 5.7 10.6 5.8 5.6 10.6 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Borrelia_rep PF03183.13 NODE_54912_length_316_cov_54.451957_g46979_i0forward_frame_2 - 0.61 10.2 4.7 1.2 9.2 0.1 3.2 3 0 0 3 3 3 0 Borrelia repeat protein MetW PF07021.12 NODE_54907_length_316_cov_66.722420_g46974_i0forward_frame_3 - 0.11 12.0 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW WBP-1 PF11669.8 NODE_54907_length_316_cov_66.722420_g46974_i0forward_frame_2 - 0.3 11.7 1.5 0.42 11.3 1.5 1.3 1 0 0 1 1 1 0 WW domain-binding protein 1 Fructosamin_kin PF03881.14 NODE_54902_length_316_cov_73.291815_g46969_i0reverse_frame_2 - 0.0014 17.9 0.0 0.0016 17.7 0.0 1.1 1 0 0 1 1 1 1 Fructosamine kinase RFC1 PF08519.12 NODE_54899_length_316_cov_74.195730_g46966_i0forward_frame_3 - 0.19 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Replication factor RFC1 C terminal domain UBX PF00789.20 NODE_54899_length_316_cov_74.195730_g46966_i0forward_frame_2 - 2.7e-17 62.7 0.0 3.3e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 UBX domain UCR_hinge PF02320.16 NODE_54899_length_316_cov_74.195730_g46966_i0forward_frame_2 - 0.0023 18.1 0.1 0.0032 17.6 0.1 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein IRK_N PF08466.10 NODE_54896_length_316_cov_80.871886_g46963_i0reverse_frame_2 - 0.1 12.8 0.2 0.29 11.3 0.1 1.9 2 0 0 2 2 2 0 Inward rectifier potassium channel N-terminal NRho PF16733.5 NODE_54894_length_316_cov_88.448399_g46961_i0reverse_frame_3 - 0.06 13.4 0.2 0.5 10.5 0.1 2.0 2 0 0 2 2 2 0 Rhomboid N-terminal domain CENP-F_leu_zip PF10473.9 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.00058 19.9 15.4 0.001 19.1 15.3 1.4 1 1 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 MctB PF11382.8 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.0052 16.5 3.6 0.006 16.3 3.6 1.0 1 0 0 1 1 1 1 Copper transport outer membrane protein, MctB BLOC1_2 PF10046.9 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.021 15.1 3.9 0.027 14.8 3.4 1.6 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.029 14.4 4.4 0.038 14.0 4.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) KxDL PF10241.9 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.036 14.4 4.2 0.04 14.2 0.5 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein FTA4 PF13093.6 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.039 13.8 5.0 0.049 13.5 5.0 1.2 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 NPV_P10 PF05531.12 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.05 14.1 1.2 0.34 11.4 0.8 2.1 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein RPW8 PF05659.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.062 13.0 3.3 0.088 12.5 3.3 1.2 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 HrpB2 PF09487.10 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.081 13.4 0.7 0.12 12.8 0.7 1.3 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB2) tRNA-Thr_ED PF08915.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.11 12.6 3.8 0.15 12.1 3.8 1.3 1 0 0 1 1 1 0 Archaea-specific editing domain of threonyl-tRNA synthetase DUF948 PF06103.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.19 12.0 1.4 0.38 11.0 1.1 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) PCRF PF03462.18 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.43 10.4 8.2 0.49 10.2 8.2 1.1 1 0 0 1 1 1 0 PCRF domain DUF16 PF01519.16 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.45 11.0 7.2 1 9.9 7.2 1.6 1 1 0 1 1 1 0 Protein of unknown function DUF16 Csm1_N PF18504.1 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.56 10.6 10.5 0.53 10.7 2.6 2.4 1 1 1 2 2 2 0 Csm1 N-terminal domain TMPIT PF07851.13 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.71 9.1 5.2 0.83 8.8 5.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein MIF4G_like_2 PF09090.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.74 9.2 7.1 0.82 9.1 7.1 1.1 1 0 0 1 1 1 0 MIF4G like FlaC_arch PF05377.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.84 10.1 8.7 0.57 10.6 5.0 2.6 2 2 0 2 2 2 0 Flagella accessory protein C (FlaC) V_ATPase_I PF01496.19 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 1.1 7.1 6.3 1.2 7.0 6.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family YtxH PF12732.7 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 2.5 8.7 5.4 9.4 6.8 5.4 2.0 1 1 0 1 1 1 0 YtxH-like protein AMP-binding PF00501.28 NODE_54892_length_316_cov_98.288256_g46959_i0forward_frame_3 - 0.14 10.7 0.1 0.15 10.6 0.1 1.1 1 0 0 1 1 1 0 AMP-binding enzyme DUF2530 PF10745.9 NODE_54890_length_316_cov_99.868327_g46957_i0reverse_frame_3 - 0.065 13.5 0.3 0.092 13.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) CDC45 PF02724.14 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_3 - 0.026 12.8 8.1 0.03 12.6 8.1 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF3381 PF11861.8 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_3 - 0.35 10.6 19.9 0.46 10.3 19.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) VIR_N PF15912.5 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_3 - 0.74 9.4 7.2 0.86 9.2 7.2 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal AAA_23 PF13476.6 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_3 - 0.94 9.9 16.3 1.1 9.8 16.3 1.0 1 0 0 1 1 1 0 AAA domain AlaE PF06610.13 NODE_54882_length_316_cov_131.334520_g46949_i0reverse_frame_3 - 0.089 12.8 0.1 4 7.5 0.0 2.1 2 0 0 2 2 2 0 L-alanine exporter DUF1244 PF06844.11 NODE_54877_length_316_cov_205.804270_g46944_i0forward_frame_2 - 0.02 15.0 0.5 0.033 14.3 0.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1244) DUF832 PF05734.11 NODE_54877_length_316_cov_205.804270_g46944_i0forward_frame_2 - 0.021 14.3 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) Clr5 PF14420.6 NODE_54868_length_317_cov_1.198582_g46936_i0forward_frame_2 - 0.17 12.1 0.1 0.17 12.1 0.1 1.7 2 0 0 2 2 2 0 Clr5 domain DUF3985 PF13153.6 NODE_54865_length_317_cov_1.273050_g46933_i0forward_frame_3 - 1.1 9.3 7.1 1.3 9.1 5.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3985) SNURF PF07192.11 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_3 - 0.089 12.6 0.1 0.17 11.8 0.1 1.5 1 0 0 1 1 1 0 SNURF/RPN4 protein AAA_11 PF13086.6 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_3 - 0.63 9.8 6.3 0.71 9.6 6.3 1.0 1 0 0 1 1 1 0 AAA domain Nsp1_C PF05064.13 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_2 - 7e-07 29.1 1.4 1.2e-06 28.3 1.4 1.3 1 0 0 1 1 1 1 Nsp1-like C-terminal region PRP1_N PF06424.12 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_2 - 0.38 11.1 10.0 0.43 11.0 10.0 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal PDCD2_C PF04194.13 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_2 - 1.1 9.3 6.8 1.1 9.3 6.8 1.1 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain CoA_binding_3 PF13727.6 NODE_54857_length_317_cov_1.539007_g46925_i0forward_frame_3 - 1.1 9.2 5.9 0.22 11.5 2.3 1.6 1 1 1 2 2 2 0 CoA-binding domain DUF4485 PF14846.6 NODE_54851_length_317_cov_1.695035_g46919_i0forward_frame_2 - 0.14 12.2 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4485) DUF3496 PF12001.8 NODE_54849_length_317_cov_1.726950_g46917_i0forward_frame_3 - 0.04 14.3 2.6 0.04 14.3 2.6 1.8 1 1 0 2 2 2 0 Domain of unknown function (DUF3496) Atg14 PF10186.9 NODE_54849_length_317_cov_1.726950_g46917_i0forward_frame_3 - 2.6 7.1 9.7 3 6.8 9.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PAP_central PF04928.17 NODE_54847_length_317_cov_1.794326_g46915_i0reverse_frame_2 - 5.2e-17 61.7 1.4 5.9e-17 61.5 1.4 1.0 1 0 0 1 1 1 1 Poly(A) polymerase central domain Mem_trans PF03547.18 NODE_54842_length_317_cov_2.131206_g46910_i0reverse_frame_3 - 0.0093 14.4 0.4 0.011 14.2 0.4 1.0 1 0 0 1 1 1 1 Membrane transport protein MetJ PF01340.20 NODE_54841_length_317_cov_2.138298_g46909_i0reverse_frame_3 - 0.0027 17.6 0.0 0.0031 17.5 0.0 1.2 1 0 0 1 1 1 1 Met Apo-repressor, MetJ ATG16 PF08614.11 NODE_54841_length_317_cov_2.138298_g46909_i0reverse_frame_3 - 0.05 13.8 0.2 0.054 13.7 0.2 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 NODE_54841_length_317_cov_2.138298_g46909_i0reverse_frame_3 - 0.059 13.4 0.1 0.094 12.7 0.1 1.3 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 bZIP_2 PF07716.15 NODE_54841_length_317_cov_2.138298_g46909_i0reverse_frame_3 - 0.077 13.1 2.2 0.13 12.3 0.1 2.0 2 0 0 2 2 2 0 Basic region leucine zipper DUF676 PF05057.14 NODE_54838_length_317_cov_2.216312_g46906_i0forward_frame_2 - 9.2e-14 51.5 0.2 9.8e-14 51.4 0.2 1.1 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 NODE_54838_length_317_cov_2.216312_g46906_i0forward_frame_2 - 0.016 15.1 0.0 0.016 15.1 0.0 1.1 1 0 0 1 1 1 0 Palmitoyl protein thioesterase ATP_bind_2 PF03668.15 NODE_54832_length_317_cov_2.301418_g46900_i0reverse_frame_3 - 0.086 12.1 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 P-loop ATPase protein family PE-PPE PF08237.11 NODE_54831_length_317_cov_2.439716_g46899_i0reverse_frame_2 - 0.05 13.2 0.0 0.055 13.0 0.0 1.0 1 0 0 1 1 1 0 PE-PPE domain TetR_C_12 PF16914.5 NODE_54829_length_317_cov_2.500000_g46897_i0reverse_frame_3 - 0.11 12.6 0.1 2 8.6 0.0 2.0 2 0 0 2 2 2 0 Bacterial transcriptional repressor C-terminal Phos_pyr_kin PF08543.12 NODE_54829_length_317_cov_2.500000_g46897_i0forward_frame_2 - 1.2e-13 51.1 0.0 1.2e-13 51.0 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 NODE_54829_length_317_cov_2.500000_g46897_i0forward_frame_2 - 6.2e-08 32.3 0.0 6.6e-08 32.2 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Usher PF00577.20 NODE_54825_length_317_cov_2.904255_g46893_i0reverse_frame_2 - 8.3e-37 127.3 0.1 9.2e-37 127.1 0.1 1.0 1 0 0 1 1 1 1 Outer membrane usher protein Sas10_Utp3 PF04000.15 NODE_54823_length_317_cov_3.003546_g46891_i0reverse_frame_3 - 9e-12 45.5 3.0 1.1e-11 45.2 3.0 1.1 1 0 0 1 1 1 1 Sas10/Utp3/C1D family EF-hand_5 PF13202.6 NODE_54823_length_317_cov_3.003546_g46891_i0forward_frame_3 - 0.97 9.0 2.8 0.67 9.5 0.7 1.8 2 0 0 2 2 2 0 EF hand ApoO PF09769.9 NODE_54819_length_317_cov_3.429078_g46887_i0forward_frame_3 - 0.094 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Apolipoprotein O PIN_5 PF08745.11 NODE_54814_length_317_cov_3.868794_g46882_i0forward_frame_2 - 0.24 10.8 0.2 0.39 10.1 0.2 1.3 1 0 0 1 1 1 0 PINc domain ribonuclease DUF4564 PF15169.6 NODE_54813_length_317_cov_4.553191_g46881_i0reverse_frame_3 - 0.04 13.6 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4564) ETC_C1_NDUFA5 PF04716.14 NODE_54813_length_317_cov_4.553191_g46881_i0reverse_frame_3 - 0.094 12.5 0.3 0.21 11.4 0.1 1.6 2 0 0 2 2 2 0 ETC complex I subunit conserved region KIAA1430 PF13879.6 NODE_54809_length_317_cov_17.113475_g46878_i0forward_frame_3 - 3.2e-07 31.1 4.6 4.5e-07 30.6 4.6 1.2 1 0 0 1 1 1 1 KIAA1430 homologue bZIP_2 PF07716.15 NODE_54809_length_317_cov_17.113475_g46878_i0forward_frame_3 - 0.039 14.0 2.7 0.068 13.3 2.7 1.4 1 0 0 1 1 1 0 Basic region leucine zipper RAMP4 PF06624.12 NODE_54808_length_317_cov_30.709220_g46877_i0reverse_frame_3 - 0.0024 17.9 3.1 0.0024 17.9 3.1 1.7 2 0 0 2 2 2 1 Ribosome associated membrane protein RAMP4 Foamy_virus_ENV PF03408.14 NODE_54808_length_317_cov_30.709220_g46877_i0reverse_frame_3 - 0.95 7.2 2.6 1.1 7.0 2.6 1.1 1 0 0 1 1 1 0 Foamy virus envelope protein ABC2_membrane_3 PF12698.7 NODE_54808_length_317_cov_30.709220_g46877_i0reverse_frame_3 - 9.4 5.2 19.0 9.7 5.2 19.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein VPS9 PF02204.18 NODE_54806_length_317_cov_42.216312_g46875_i0forward_frame_3 - 3.2e-06 27.3 0.4 5.3e-06 26.6 0.4 1.3 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain ROQ_II PF18386.1 NODE_54806_length_317_cov_42.216312_g46875_i0forward_frame_3 - 0.021 14.6 0.2 0.2 11.5 0.0 2.1 1 1 1 2 2 2 0 Roquin II domain ACC_epsilon PF13822.6 NODE_54805_length_317_cov_43.829787_g46874_i0reverse_frame_3 - 0.037 14.7 6.3 0.037 14.7 6.3 3.1 1 1 1 2 2 2 0 Acyl-CoA carboxylase epsilon subunit Protocadherin PF08374.11 NODE_54805_length_317_cov_43.829787_g46874_i0reverse_frame_3 - 0.071 13.1 1.7 0.077 13.0 1.7 1.1 1 0 0 1 1 1 0 Protocadherin DZR PF12773.7 NODE_54804_length_317_cov_46.684397_g46873_i0forward_frame_2 - 0.44 10.6 4.4 0.31 11.1 2.3 1.7 2 0 0 2 2 2 0 Double zinc ribbon Lamprin PF06403.11 NODE_54803_length_317_cov_58.578014_g46872_i0forward_frame_2 - 3.3 7.7 6.7 9.2 6.2 6.7 1.8 1 1 0 1 1 1 0 Lamprin MTHFR_C PF12225.8 NODE_54802_length_317_cov_59.265957_g46871_i0reverse_frame_2 - 0.038 13.6 0.3 0.038 13.6 0.3 1.6 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal UPF1_Zn_bind PF09416.10 NODE_54801_length_317_cov_59.361702_g46870_i0reverse_frame_2 - 0.0067 16.4 0.5 0.0082 16.1 0.5 1.1 1 0 0 1 1 1 1 RNA helicase (UPF2 interacting domain) Rpr2 PF04032.16 NODE_54801_length_317_cov_59.361702_g46870_i0reverse_frame_2 - 0.03 14.6 0.4 0.03 14.6 0.4 1.5 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Zf_RING PF16744.5 NODE_54801_length_317_cov_59.361702_g46870_i0reverse_frame_2 - 0.072 13.2 0.1 0.17 12.0 0.1 1.5 2 0 0 2 2 2 0 KIAA1045 RING finger NB PF04159.13 NODE_54784_length_317_cov_163.414894_g46853_i0forward_frame_2 - 0.058 13.4 3.5 4.1 7.5 1.3 2.1 1 1 0 2 2 2 0 NB glycoprotein DUF3974 PF13120.6 NODE_54784_length_317_cov_163.414894_g46853_i0forward_frame_2 - 0.13 12.4 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) DUF2721 PF11026.8 NODE_54783_length_317_cov_172.751773_g46852_i0forward_frame_3 - 0.18 11.7 1.4 0.23 11.4 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) DUF3038 PF11237.8 NODE_54777_length_317_cov_255.269504_g46846_i0forward_frame_2 - 0.023 14.7 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) Vps36-NZF-N PF16988.5 NODE_54774_length_317_cov_294.237589_g46843_i0reverse_frame_2 - 0.098 12.1 0.8 0.12 11.7 0.0 1.5 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain ARID PF01388.21 NODE_54773_length_317_cov_378.202128_g46842_i0forward_frame_3 - 0.061 14.0 0.0 0.076 13.7 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain zinc_ribbon_10 PF10058.9 NODE_54771_length_317_cov_1061.539007_g46840_i0forward_frame_2 - 1.6 8.5 6.9 0.71 9.7 1.8 2.5 2 1 1 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein CpXC PF14353.6 NODE_54769_length_317_cov_4792.191489_g46838_i0forward_frame_3 - 0.13 12.3 0.1 0.24 11.4 0.0 1.4 2 0 0 2 2 2 0 CpXC protein Collagen PF01391.18 NODE_54768_length_317_cov_12721.968085_g46837_i0forward_frame_3 - 0.0034 17.1 11.7 0.0051 16.5 11.7 1.4 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) Toxin_23 PF08093.11 NODE_54768_length_317_cov_12721.968085_g46837_i0forward_frame_2 - 0.19 11.9 0.2 0.19 11.9 0.2 1.9 2 0 0 2 2 2 0 Magi 5 toxic peptide family DUF3482 PF11981.8 NODE_54767_length_317_cov_19653.907801_g46836_i0forward_frame_3 - 0.013 14.9 6.4 0.014 14.8 6.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) DNA_gyraseB_C PF00986.21 NODE_54761_length_318_cov_1.445230_g46830_i0forward_frame_2 - 0.21 11.8 2.2 0.26 11.5 0.3 1.9 2 0 0 2 2 2 0 DNA gyrase B subunit, carboxyl terminus zf_UBZ PF18439.1 NODE_54756_length_318_cov_1.784452_g46825_i0reverse_frame_3 - 0.09 12.4 1.1 0.09 12.4 1.1 2.7 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf_C2H2_13 PF18508.1 NODE_54756_length_318_cov_1.784452_g46825_i0reverse_frame_3 - 2 8.1 7.4 8.9 6.0 0.0 3.0 3 0 0 3 3 3 0 Zinc finger domain zf-RRN7 PF11781.8 NODE_54756_length_318_cov_1.784452_g46825_i0reverse_frame_3 - 4.7 7.0 12.1 4.2 7.2 6.9 2.6 2 1 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Herpes_UL33 PF03581.13 NODE_54755_length_318_cov_1.833922_g46824_i0reverse_frame_3 - 0.13 12.7 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 Herpesvirus UL33-like protein Plasmod_MYXSPDY PF07981.11 NODE_54755_length_318_cov_1.833922_g46824_i0reverse_frame_3 - 0.56 10.3 3.4 3.7 7.7 0.4 2.4 2 0 0 2 2 2 0 Plasmodium repeat_MYXSPDY DUF4817 PF16087.5 NODE_54754_length_318_cov_1.869258_g46823_i0reverse_frame_3 - 0.047 13.5 0.2 0.086 12.7 0.2 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) FAA_hydrolase PF01557.18 NODE_54754_length_318_cov_1.869258_g46823_i0reverse_frame_2 - 1.5e-23 83.7 0.0 1.6e-23 83.6 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family UPF0014 PF03649.13 NODE_54754_length_318_cov_1.869258_g46823_i0reverse_frame_2 - 0.22 10.8 0.0 0.29 10.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0014) RBM1CTR PF08081.11 NODE_54752_length_318_cov_1.946996_g46821_i0forward_frame_2 - 0.72 10.0 7.4 4.6 7.4 7.4 2.2 1 1 0 1 1 1 0 RBM1CTR (NUC064) family PRNT PF15174.6 NODE_54750_length_318_cov_1.996466_g46819_i0reverse_frame_3 - 0.13 12.3 0.2 8.5 6.5 0.0 2.2 2 0 0 2 2 2 0 Prion-related protein testis-specific NPCC PF08058.11 NODE_54750_length_318_cov_1.996466_g46819_i0forward_frame_3 - 3.4 7.7 6.7 4 7.5 6.7 1.1 1 0 0 1 1 1 0 Nuclear pore complex component Pox_A12 PF04651.13 NODE_54748_length_318_cov_2.077739_g46817_i0forward_frame_2 - 0.079 13.0 0.2 0.1 12.7 0.2 1.2 1 1 0 1 1 1 0 Poxvirus A12 protein Deltameth_res PF16020.5 NODE_54743_length_318_cov_2.183746_g46812_i0reverse_frame_3 - 7.7 6.5 5.5 2 8.4 1.6 2.0 1 1 0 2 2 2 0 Deltamethrin resistance NUT PF12881.7 NODE_54743_length_318_cov_2.183746_g46812_i0forward_frame_2 - 4.9 5.4 14.7 5 5.4 14.7 1.0 1 0 0 1 1 1 0 NUT protein C1_1 PF00130.22 NODE_54742_length_318_cov_2.243816_g46811_i0reverse_frame_3 - 0.93 9.4 10.0 4.3 7.3 4.0 2.3 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) P2_N PF18628.1 NODE_54740_length_318_cov_2.469965_g46809_i0reverse_frame_2 - 0.082 12.7 1.9 0.13 12.0 1.9 1.4 1 1 0 1 1 1 0 Viral coat protein P2 N-terminal domain Poxvirus_B22R_C PF13168.6 NODE_54739_length_318_cov_2.519435_g46808_i0reverse_frame_3 - 0.046 13.2 0.2 0.057 12.9 0.2 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein C-terminal RhaT PF06379.12 NODE_54737_length_318_cov_2.604240_g46806_i0reverse_frame_2 - 7.3e-42 143.8 2.9 8.4e-42 143.6 2.9 1.0 1 0 0 1 1 1 1 L-rhamnose-proton symport protein (RhaT) Glt_symporter PF03616.14 NODE_54737_length_318_cov_2.604240_g46806_i0reverse_frame_2 - 0.02 13.6 0.2 0.022 13.5 0.2 1.1 1 0 0 1 1 1 0 Sodium/glutamate symporter tRNA-synt_2c PF01411.19 NODE_54737_length_318_cov_2.604240_g46806_i0forward_frame_3 - 0.0072 14.9 0.0 0.0096 14.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DUF4632 PF15451.6 NODE_54737_length_318_cov_2.604240_g46806_i0forward_frame_2 - 0.098 12.7 4.1 1.3 9.2 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4632) Mrx7 PF10906.8 NODE_54736_length_318_cov_2.660777_g46805_i0reverse_frame_2 - 0.1 12.9 0.1 0.25 11.6 0.0 1.6 2 0 0 2 2 2 0 MIOREX complex component 7 SPATA3 PF15662.5 NODE_54733_length_318_cov_2.766784_g46802_i0reverse_frame_2 - 9.4 6.8 10.5 14 6.3 10.5 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family zf-RING_13 PF17977.1 NODE_54733_length_318_cov_2.766784_g46802_i0forward_frame_2 - 0.071 13.2 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Exo_endo_phos PF03372.23 NODE_54731_length_318_cov_3.091873_g46800_i0forward_frame_2 - 0.002 17.7 0.0 0.0023 17.5 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_54731_length_318_cov_3.091873_g46800_i0forward_frame_2 - 0.0027 17.5 0.0 0.009 15.9 0.0 1.8 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase Peptidase_C92 PF05708.12 NODE_54727_length_318_cov_3.180212_g46796_i0reverse_frame_3 - 1.2e-07 31.9 0.0 1.7e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family NLPC_P60 PF00877.19 NODE_54727_length_318_cov_3.180212_g46796_i0reverse_frame_3 - 3.6e-05 23.7 0.0 0.00014 21.9 0.0 1.7 1 1 0 1 1 1 1 NlpC/P60 family DUF3148 PF11347.8 NODE_54727_length_318_cov_3.180212_g46796_i0reverse_frame_3 - 0.14 12.0 0.0 3.2 7.6 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3148) TrkA_C PF02080.21 NODE_54726_length_318_cov_3.268551_g46795_i0reverse_frame_3 - 0.0012 18.7 0.0 0.0015 18.3 0.0 1.2 1 0 0 1 1 1 1 TrkA-C domain Thioredoxin_11 PF18078.1 NODE_54725_length_318_cov_3.272085_g46794_i0reverse_frame_2 - 0.17 12.0 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like SNTX domain APT PF03440.14 NODE_54724_length_318_cov_3.279152_g46793_i0reverse_frame_3 - 0.19 11.7 0.1 0.26 11.3 0.1 1.2 1 0 0 1 1 1 0 Aerolysin/Pertussis toxin (APT) domain NPP PF08384.10 NODE_54724_length_318_cov_3.279152_g46793_i0forward_frame_2 - 1.6 8.9 4.8 27 4.9 0.0 3.1 3 0 0 3 3 3 0 Pro-opiomelanocortin, N-terminal region Mrr_cat_2 PF13156.6 NODE_54719_length_318_cov_5.636042_g46788_i0forward_frame_3 - 0.071 13.0 2.1 0.082 12.8 2.1 1.1 1 0 0 1 1 1 0 Restriction endonuclease OmpH PF03938.14 NODE_54719_length_318_cov_5.636042_g46788_i0forward_frame_2 - 0.089 13.1 6.8 0.1 12.9 6.8 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TMPIT PF07851.13 NODE_54719_length_318_cov_5.636042_g46788_i0forward_frame_2 - 0.44 9.7 4.2 0.46 9.7 4.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein Scramblase PF03803.15 NODE_54713_length_318_cov_37.487633_g46782_i0reverse_frame_3 - 0.095 12.0 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Scramblase DUF998 PF06197.13 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.0079 15.8 1.1 0.0084 15.7 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF998) Na_Ca_ex PF01699.24 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.013 15.5 0.2 0.017 15.1 0.2 1.2 1 0 0 1 1 1 0 Sodium/calcium exchanger protein DUF2781 PF10914.8 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.026 14.9 1.0 0.032 14.6 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) YoqO PF14037.6 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.047 14.2 0.1 0.06 13.9 0.1 1.1 1 0 0 1 1 1 0 YoqO-like protein TraL PF07178.11 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.063 13.8 0.2 0.076 13.5 0.2 1.2 1 0 0 1 1 1 0 TraL protein SPC25 PF06703.11 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.072 12.9 2.8 0.098 12.4 2.8 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) TPR_21 PF09976.9 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.43 10.3 1.2 0.54 9.9 1.2 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain DUF2457 PF10446.9 NODE_54710_length_318_cov_45.897527_g46779_i0reverse_frame_2 - 0.31 10.1 4.3 0.31 10.2 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF758 PF05527.11 NODE_54704_length_318_cov_60.190813_g46773_i0reverse_frame_3 - 0.035 14.1 0.8 0.042 13.8 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF758) CCDC106 PF15794.5 NODE_54703_length_318_cov_60.773852_g46772_i0forward_frame_3 - 2.6 7.7 11.9 3 7.5 11.9 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Alanine_zipper PF11839.8 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 0.0046 17.3 17.2 0.094 13.1 17.2 2.1 1 1 0 1 1 1 1 Alanine-zipper, major outer membrane lipoprotein HrcA PF01628.21 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 0.13 12.1 0.8 0.14 12.0 0.8 1.0 1 0 0 1 1 1 0 HrcA protein C terminal domain PTS_IIA PF02255.16 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 0.54 10.3 6.9 0.63 10.1 5.6 1.8 1 1 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIA subunit DUF3416 PF11896.8 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 0.91 9.8 7.1 1.3 9.3 7.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3416) FUSC PF04632.12 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 1.5 7.3 9.8 1.7 7.1 9.8 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Ribosomal_L7Ae PF01248.26 NODE_54701_length_318_cov_62.706714_g46770_i0forward_frame_2 - 0.0033 17.1 0.0 0.006 16.3 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DUF5619 PF18505.1 NODE_54693_length_318_cov_71.858657_g46762_i0forward_frame_2 - 0.082 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5619) Rad21_Rec8 PF04824.16 NODE_54687_length_318_cov_88.883392_g46756_i0reverse_frame_3 - 0.021 14.1 0.4 0.049 12.9 0.4 1.6 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein Herpes_UL6 PF01763.16 NODE_54686_length_318_cov_93.890459_g46755_i0reverse_frame_3 - 0.026 13.1 0.4 0.031 12.8 0.4 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like DUF3326 PF11805.8 NODE_54686_length_318_cov_93.890459_g46755_i0forward_frame_3 - 0.083 11.7 0.0 0.1 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3326) DUF4164 PF13747.6 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.0027 17.9 4.8 0.0027 17.9 4.8 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) CENP-F_leu_zip PF10473.9 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.014 15.4 9.6 0.23 11.5 9.2 2.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ApoO PF09769.9 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.036 14.0 0.6 0.047 13.6 0.6 1.1 1 0 0 1 1 1 0 Apolipoprotein O JAKMIP_CC3 PF16034.5 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.12 12.4 7.9 0.14 12.1 7.9 1.1 1 0 0 1 1 1 0 JAKMIP CC3 domain Atg14 PF10186.9 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.84 8.7 8.1 1 8.4 8.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2968 PF11180.8 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 1.6 8.4 8.3 2.7 7.6 5.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) DivIC PF04977.15 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 2.4 8.0 8.3 13 5.7 6.2 2.5 1 1 2 3 3 3 0 Septum formation initiator Cytochrome_CBB3 PF13442.6 NODE_54681_length_318_cov_127.250883_g46750_i0reverse_frame_2 - 0.064 13.6 0.2 0.086 13.2 0.2 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III MORN PF02493.20 NODE_54681_length_318_cov_127.250883_g46750_i0forward_frame_2 - 2.2e-06 27.2 1.1 2.2e-06 27.2 1.1 3.6 4 0 0 4 4 4 2 MORN repeat Rep_1 PF01446.17 NODE_54679_length_318_cov_136.484099_g46748_i0reverse_frame_2 - 0.029 13.8 1.5 0.035 13.6 1.5 1.1 1 0 0 1 1 1 0 Replication protein Zn_Tnp_IS91 PF14319.6 NODE_54679_length_318_cov_136.484099_g46748_i0reverse_frame_2 - 0.068 13.2 1.4 0.11 12.5 1.1 1.6 2 0 0 2 2 2 0 Transposase zinc-binding domain DUF3297 PF11730.8 NODE_54679_length_318_cov_136.484099_g46748_i0forward_frame_3 - 0.16 11.9 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3297) Carbam_trans_C PF16861.5 NODE_54678_length_318_cov_142.141343_g46747_i0reverse_frame_2 - 3.4e-16 59.3 0.0 4.4e-16 58.9 0.0 1.1 1 0 0 1 1 1 1 Carbamoyltransferase C-terminus Sua5_yciO_yrdC PF01300.18 NODE_54678_length_318_cov_142.141343_g46747_i0reverse_frame_2 - 0.11 12.0 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Telomere recombination DUF123 PF01986.16 NODE_54674_length_318_cov_198.681979_g46743_i0reverse_frame_3 - 0.15 12.6 0.0 0.18 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF123 DRMBL PF07522.14 NODE_54674_length_318_cov_198.681979_g46743_i0forward_frame_3 - 0.0058 16.8 0.1 0.0068 16.6 0.1 1.1 1 0 0 1 1 1 1 DNA repair metallo-beta-lactamase Oxysterol_BP PF01237.18 NODE_54674_length_318_cov_198.681979_g46743_i0forward_frame_3 - 0.071 11.9 0.0 0.081 11.7 0.0 1.0 1 0 0 1 1 1 0 Oxysterol-binding protein DUF753 PF05444.12 NODE_54671_length_318_cov_335.526502_g46740_i0reverse_frame_3 - 0.021 14.8 0.6 0.024 14.6 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF753) Trefoil PF00088.18 NODE_54671_length_318_cov_335.526502_g46740_i0forward_frame_2 - 5.2 7.0 17.4 1.8e+04 -5.0 17.4 2.9 1 1 0 1 1 1 0 Trefoil (P-type) domain ALMT PF11744.8 NODE_54667_length_318_cov_3597.558304_g46736_i0reverse_frame_3 - 0.045 12.6 0.3 0.064 12.1 0.2 1.3 1 1 0 1 1 1 0 Aluminium activated malate transporter DUF824 PF05688.11 NODE_54666_length_318_cov_5598.385159_g46735_i0reverse_frame_2 - 0.22 11.4 0.1 0.41 10.5 0.1 1.5 2 0 0 2 2 2 0 Salmonella repeat of unknown function (DUF824) VAD1-2 PF15310.6 ORF9932 - 0.099 12.5 0.3 0.12 12.2 0.3 1.1 1 0 0 1 1 1 0 Vitamin A-deficiency (VAD) rat model signalling Bac_DNA_binding PF00216.21 ORF99286 - 7.3e-13 48.5 2.3 8.8e-13 48.3 2.3 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein HTH_IclR PF09339.10 ORF99286 - 0.059 13.2 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Lebercilin PF15619.6 ORF98900 - 3.8e-06 26.7 10.0 4.2e-06 26.6 10.0 1.0 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Laminin_II PF06009.12 ORF98900 - 4.6e-05 23.5 4.0 5.7e-05 23.1 4.0 1.2 1 0 0 1 1 1 1 Laminin Domain II DUF4472 PF14739.6 ORF98900 - 4.9e-05 24.0 10.8 6.2e-05 23.7 10.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4472) Spc7 PF08317.11 ORF98900 - 6.5e-05 22.0 10.4 7.3e-05 21.8 10.4 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein ADIP PF11559.8 ORF98900 - 8.3e-05 22.7 9.1 0.00014 22.0 9.1 1.4 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Atg14 PF10186.9 ORF98900 - 8.4e-05 21.8 7.2 0.0001 21.5 7.2 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 EzrA PF06160.12 ORF98900 - 0.0001 20.7 10.4 0.00012 20.4 10.4 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA Fez1 PF06818.15 ORF98900 - 0.00012 22.6 8.6 0.00018 22.1 8.6 1.3 1 0 0 1 1 1 1 Fez1 DHR10 PF18595.1 ORF98900 - 0.00018 21.5 10.4 0.00024 21.1 10.4 1.3 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain ATG16 PF08614.11 ORF98900 - 0.00019 21.7 9.4 0.00022 21.5 9.4 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF948 PF06103.11 ORF98900 - 0.00045 20.4 3.1 0.00064 19.9 3.1 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Taxilin PF09728.9 ORF98900 - 0.00053 19.3 11.1 0.00076 18.7 11.1 1.3 1 1 0 1 1 1 1 Myosin-like coiled-coil protein IFT57 PF10498.9 ORF98900 - 0.00062 18.8 6.0 0.00071 18.6 6.0 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF4201 PF13870.6 ORF98900 - 0.00063 19.5 12.4 0.00079 19.2 12.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) AAA_13 PF13166.6 ORF98900 - 0.00068 18.4 8.9 0.00075 18.3 8.9 1.0 1 0 0 1 1 1 1 AAA domain Cast PF10174.9 ORF98900 - 0.00093 17.6 8.6 0.0011 17.3 8.6 1.0 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone HAP1_N PF04849.13 ORF98900 - 0.00093 18.5 10.8 0.001 18.3 10.8 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region DUF641 PF04859.12 ORF98900 - 0.00094 19.5 8.8 0.097 13.0 6.4 2.1 1 1 1 2 2 2 2 Plant protein of unknown function (DUF641) DUF724 PF05266.14 ORF98900 - 0.0013 18.5 8.5 0.0019 18.0 8.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF98900 - 0.0016 18.5 5.0 0.002 18.2 5.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF98900 - 0.0016 17.8 8.2 0.0018 17.6 8.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) BST2 PF16716.5 ORF98900 - 0.0018 18.8 7.4 0.0018 18.8 7.4 2.0 1 1 1 2 2 2 1 Bone marrow stromal antigen 2 Tropomyosin_1 PF12718.7 ORF98900 - 0.002 18.3 19.5 0.015 15.4 15.3 2.0 1 1 1 2 2 2 2 Tropomyosin like TPR_MLP1_2 PF07926.12 ORF98900 - 0.0021 18.1 13.2 0.0059 16.7 9.0 2.0 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein DUF745 PF05335.13 ORF98900 - 0.0023 17.7 3.1 0.0027 17.5 3.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF745) DUF2046 PF09755.9 ORF98900 - 0.0023 17.2 10.2 0.0027 17.0 10.2 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) DUF16 PF01519.16 ORF98900 - 0.0031 18.0 11.2 0.096 13.2 7.5 2.0 1 1 1 2 2 2 2 Protein of unknown function DUF16 DUF3584 PF12128.8 ORF98900 - 0.0035 15.0 7.3 0.004 14.8 7.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) GAS PF13851.6 ORF98900 - 0.0041 16.5 13.8 0.011 15.1 13.7 1.5 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding HOOK PF05622.12 ORF98900 - 0.0042 15.3 11.9 0.0043 15.3 11.9 1.0 1 0 0 1 1 1 1 HOOK protein Seryl_tRNA_N PF02403.22 ORF98900 - 0.0048 17.1 9.9 0.0075 16.5 9.9 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF4200 PF13863.6 ORF98900 - 0.005 17.2 15.1 0.038 14.4 15.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4200) Fib_alpha PF08702.10 ORF98900 - 0.0053 16.9 9.0 0.18 12.0 1.1 2.2 1 1 0 2 2 2 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF98900 - 0.0053 17.0 7.9 0.0073 16.6 7.5 1.5 1 1 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 CENP-F_leu_zip PF10473.9 ORF98900 - 0.0055 16.7 13.9 0.0062 16.6 13.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Csm1_N PF18504.1 ORF98900 - 0.0056 17.0 13.3 0.21 11.9 5.0 2.4 1 1 1 2 2 2 2 Csm1 N-terminal domain Tropomyosin PF00261.20 ORF98900 - 0.0059 16.0 12.5 0.0072 15.7 12.5 1.2 1 0 0 1 1 1 1 Tropomyosin CC2-LZ PF16516.5 ORF98900 - 0.009 16.4 13.5 0.12 12.7 9.9 2.1 1 1 1 2 2 2 2 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator CENP-H PF05837.12 ORF98900 - 0.012 16.1 7.0 0.015 15.7 7.0 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) KxDL PF10241.9 ORF98900 - 0.012 15.9 6.3 0.18 12.1 6.3 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein DUF812 PF05667.11 ORF98900 - 0.012 14.5 13.6 0.025 13.5 13.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF812) HMMR_N PF15905.5 ORF98900 - 0.014 14.9 15.6 0.038 13.5 15.6 1.6 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal PKcGMP_CC PF16808.5 ORF98900 - 0.015 15.1 16.5 1.3 8.9 0.0 4.0 2 1 2 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Exonuc_VII_L PF02601.15 ORF98900 - 0.016 14.8 2.8 0.018 14.6 2.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit THOC7 PF05615.13 ORF98900 - 0.016 15.4 11.9 0.42 10.9 11.9 2.0 1 1 0 1 1 1 0 Tho complex subunit 7 BRE1 PF08647.11 ORF98900 - 0.019 15.0 14.4 0.035 14.2 14.4 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase T3SSipB PF16535.5 ORF98900 - 0.022 15.2 7.0 0.038 14.5 7.0 1.4 1 1 0 1 1 1 0 Type III cell invasion protein SipB TMF_TATA_bd PF12325.8 ORF98900 - 0.023 14.9 14.3 0.51 10.6 14.3 2.3 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Prefoldin PF02996.17 ORF98900 - 0.023 14.6 13.6 0.11 12.4 2.5 2.1 1 1 0 2 2 2 0 Prefoldin subunit DivIC PF04977.15 ORF98900 - 0.024 14.4 16.5 0.15 11.9 4.6 2.5 1 1 1 2 2 2 0 Septum formation initiator Phage_GPO PF05929.11 ORF98900 - 0.027 14.1 5.4 0.038 13.6 5.4 1.3 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase TMPIT PF07851.13 ORF98900 - 0.028 13.7 7.7 0.031 13.5 7.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein HemX PF04375.14 ORF98900 - 0.029 13.7 5.4 0.034 13.4 5.4 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Golgin_A5 PF09787.9 ORF98900 - 0.03 13.8 11.2 0.034 13.6 11.2 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 LOH1CR12 PF10158.9 ORF98900 - 0.03 14.3 2.9 0.035 14.1 2.9 1.2 1 0 0 1 1 1 0 Tumour suppressor protein Occludin_ELL PF07303.13 ORF98900 - 0.031 15.0 5.8 0.084 13.6 5.9 1.8 1 1 0 1 1 1 0 Occludin homology domain Sec8_exocyst PF04048.14 ORF98900 - 0.033 14.1 6.8 0.27 11.1 1.6 2.0 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain GrpE PF01025.19 ORF98900 - 0.034 13.8 15.0 1.2 8.8 15.0 2.1 1 1 0 1 1 1 0 GrpE Prominin PF05478.11 ORF98900 - 0.039 11.9 2.8 0.041 11.9 2.8 1.0 1 0 0 1 1 1 0 Prominin DUF4407 PF14362.6 ORF98900 - 0.04 13.3 8.1 0.067 12.5 8.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FPP PF05911.11 ORF98900 - 0.041 12.1 12.4 0.048 11.9 12.4 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil FapA PF03961.13 ORF98900 - 0.042 12.4 9.6 0.049 12.2 9.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A OmpH PF03938.14 ORF98900 - 0.046 14.0 14.1 0.11 12.9 14.1 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) GldM_N PF12081.8 ORF98900 - 0.047 13.8 7.0 0.057 13.5 7.0 1.2 1 0 0 1 1 1 0 GldM N-terminal domain TMF_DNA_bd PF12329.8 ORF98900 - 0.049 13.6 18.6 0.18 11.8 14.0 2.2 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF5082 PF16888.5 ORF98900 - 0.051 13.9 10.9 1.9 8.8 6.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Phage_GP20 PF06810.11 ORF98900 - 0.051 13.4 17.4 1.2 8.9 17.4 2.0 1 1 0 1 1 1 0 Phage minor structural protein GP20 UPF0242 PF06785.11 ORF98900 - 0.052 13.7 15.2 0.083 13.0 15.2 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus E2R135 PF11570.8 ORF98900 - 0.052 13.8 5.0 0.16 12.3 5.0 1.7 1 1 0 1 1 1 0 Coiled-coil receptor-binding R-domain of colicin E2 DASH_Spc34 PF08657.10 ORF98900 - 0.058 13.2 10.0 0.18 11.6 10.0 1.7 1 1 0 1 1 1 0 DASH complex subunit Spc34 YtxH PF12732.7 ORF98900 - 0.066 13.8 4.9 0.19 12.3 4.9 1.8 1 1 0 1 1 1 0 YtxH-like protein DUF2968 PF11180.8 ORF98900 - 0.066 12.8 4.6 0.099 12.3 4.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Jnk-SapK_ap_N PF09744.9 ORF98900 - 0.066 13.4 12.6 0.093 13.0 12.6 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Spc24 PF08286.11 ORF98900 - 0.074 13.3 14.3 0.86 9.9 6.3 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Baculo_PEP_C PF04513.12 ORF98900 - 0.077 13.0 3.7 0.16 12.0 3.6 1.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Tho2 PF11262.8 ORF98900 - 0.078 12.2 6.6 0.087 12.0 6.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Sec2p PF06428.11 ORF98900 - 0.084 12.8 12.9 0.3 11.1 11.2 2.0 1 1 2 3 3 3 0 GDP/GTP exchange factor Sec2p CENP-Q PF13094.6 ORF98900 - 0.096 12.9 13.2 0.89 9.7 13.1 1.9 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit DLP_helical PF18709.1 ORF98900 - 0.097 11.9 8.3 0.21 10.8 8.2 1.6 1 1 1 2 2 2 0 Dynamin-like helical domain Hrs_helical PF12210.8 ORF98900 - 0.097 13.2 8.1 1.2 9.7 8.1 2.0 1 1 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Snapin_Pallidin PF14712.6 ORF98900 - 0.098 13.1 10.3 0.22 12.0 5.3 2.0 1 1 0 1 1 1 0 Snapin/Pallidin FlaC_arch PF05377.11 ORF98900 - 0.1 13.0 11.9 0.42 11.0 3.1 2.4 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) DUF4298 PF14131.6 ORF98900 - 0.1 12.6 9.5 0.79 9.7 0.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) TolA_bind_tri PF16331.5 ORF98900 - 0.11 12.6 10.3 0.86 9.7 10.2 2.1 1 1 0 1 1 1 0 TolA binding protein trimerisation WXG100 PF06013.12 ORF98900 - 0.11 12.7 2.5 0.66 10.2 0.4 2.1 1 1 1 2 2 2 0 Proteins of 100 residues with WXG HrpB7 PF09486.10 ORF98900 - 0.11 12.8 7.1 0.21 11.9 7.1 1.5 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) PRKG1_interact PF15898.5 ORF98900 - 0.13 13.2 9.3 0.78 10.7 3.7 2.0 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain FlxA PF14282.6 ORF98900 - 0.13 12.2 12.3 3.3 7.7 12.4 2.0 1 1 0 1 1 1 0 FlxA-like protein Lzipper-MIP1 PF14389.6 ORF98900 - 0.13 12.5 10.3 0.6 10.4 3.2 2.4 2 1 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 Cep57_MT_bd PF06657.13 ORF98900 - 0.14 12.6 9.4 0.28 11.7 8.9 1.7 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 USP8_interact PF08941.10 ORF98900 - 0.16 11.8 6.5 0.82 9.5 1.2 2.0 1 1 0 2 2 2 0 USP8 interacting Med9 PF07544.13 ORF98900 - 0.18 11.9 7.4 0.47 10.6 7.4 1.8 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 MetOD2 PF18548.1 ORF98900 - 0.18 11.9 5.9 0.87 9.7 0.5 2.2 2 0 0 2 2 2 0 Metanogen output domain 2 Lectin_N PF03954.14 ORF98900 - 0.19 11.5 7.8 0.31 10.8 2.2 2.2 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Swi5 PF07061.11 ORF98900 - 0.19 11.8 11.4 0.17 12.0 1.6 2.2 1 1 1 2 2 2 0 Swi5 HIP1_clath_bdg PF16515.5 ORF98900 - 0.19 12.3 12.6 0.35 11.5 2.4 2.1 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ZapB PF06005.12 ORF98900 - 0.2 12.1 14.8 0.47 10.9 2.4 2.1 1 1 1 2 2 2 0 Cell division protein ZapB Rho_Binding PF08912.11 ORF98900 - 0.2 12.5 16.8 0.24 12.3 6.3 2.5 1 1 1 2 2 2 0 Rho Binding V-SNARE PF05008.15 ORF98900 - 0.23 11.8 11.9 0.22 11.9 4.3 2.3 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus Sec34 PF04136.15 ORF98900 - 0.23 11.3 9.7 0.41 10.5 2.0 1.9 1 1 1 2 2 2 0 Sec34-like family LPP PF04728.13 ORF98900 - 0.25 11.8 9.3 0.42 11.0 5.1 2.3 1 1 0 2 2 2 0 Lipoprotein leucine-zipper NPV_P10 PF05531.12 ORF98900 - 0.26 11.8 11.0 0.19 12.2 6.3 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein V_ATPase_I PF01496.19 ORF98900 - 0.29 9.0 6.1 0.36 8.7 6.1 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ABC_tran_CTD PF16326.5 ORF98900 - 0.34 11.2 17.2 0.63 10.3 11.9 2.6 1 1 2 3 3 3 0 ABC transporter C-terminal domain HalX PF08663.10 ORF98900 - 0.34 11.3 11.5 0.65 10.4 6.3 2.8 1 1 2 3 3 3 0 HalX domain DUF2203 PF09969.9 ORF98900 - 0.35 11.6 5.1 0.56 10.9 5.0 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) PCRF PF03462.18 ORF98900 - 0.35 10.7 7.3 0.43 10.4 7.3 1.2 1 0 0 1 1 1 0 PCRF domain DUF4337 PF14235.6 ORF98900 - 0.35 11.0 5.9 0.44 10.6 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4446 PF14584.6 ORF98900 - 0.36 10.8 8.7 1.6 8.7 0.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF4795 PF16043.5 ORF98900 - 0.42 10.2 13.6 1.1 8.9 13.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) NYD-SP28 PF14772.6 ORF98900 - 0.43 10.7 17.1 0.62 10.1 1.3 2.7 1 1 1 2 2 2 0 Sperm tail YabA PF06156.13 ORF98900 - 0.49 11.1 10.5 7.1 7.3 10.0 2.0 1 1 0 1 1 1 0 Initiation control protein YabA SseC PF04888.12 ORF98900 - 0.54 9.8 8.9 0.095 12.3 4.9 1.6 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family LMBR1 PF04791.16 ORF98900 - 0.58 9.0 2.7 0.63 8.9 2.7 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein FliD_N PF02465.18 ORF98900 - 0.67 10.7 4.3 1.9 9.2 4.3 1.8 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus XhlA PF10779.9 ORF98900 - 0.72 10.1 12.4 0.37 11.0 1.9 2.1 1 1 2 3 3 3 0 Haemolysin XhlA DPM3 PF08285.11 ORF98900 - 0.72 10.1 7.2 5.2 7.3 1.7 2.3 1 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Hemagglutinin PF00509.18 ORF98900 - 0.74 8.2 5.2 0.9 7.9 5.2 1.3 1 0 0 1 1 1 0 Haemagglutinin DUF4140 PF13600.6 ORF98900 - 0.85 10.1 10.4 2.8 8.5 1.7 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF1515 PF07439.11 ORF98900 - 0.9 9.6 2.8 4.5 7.3 2.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) APG6_N PF17675.1 ORF98900 - 0.91 10.0 19.2 2.5 8.7 19.2 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region Ax_dynein_light PF10211.9 ORF98900 - 0.92 9.4 12.8 0.61 10.0 10.7 1.6 1 1 1 2 2 2 0 Axonemal dynein light chain Prefoldin_2 PF01920.20 ORF98900 - 0.94 9.5 16.6 2.8 8.0 6.1 2.2 1 1 1 2 2 2 0 Prefoldin subunit CASP_C PF08172.12 ORF98900 - 0.98 8.7 10.2 0.18 11.1 1.0 2.1 1 1 1 2 2 2 0 CASP C terminal FAM76 PF16046.5 ORF98900 - 1 8.7 9.0 1.9 7.7 8.7 1.5 1 1 0 1 1 1 0 FAM76 protein DUF2570 PF10828.8 ORF98900 - 1.2 9.0 7.1 0.35 10.7 2.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) DASH_Dam1 PF08653.10 ORF98900 - 1.3 8.9 3.9 3 7.7 1.0 2.6 1 1 1 2 2 2 0 DASH complex subunit Dam1 Cluap1 PF10234.9 ORF98900 - 1.3 8.4 12.6 5.3 6.4 1.8 1.7 1 1 1 2 2 2 0 Clusterin-associated protein-1 SlyX PF04102.12 ORF98900 - 1.4 9.6 11.8 6 7.6 10.2 2.4 1 1 1 2 2 2 0 SlyX Wtap PF17098.5 ORF98900 - 1.5 8.8 12.1 0.4 10.6 2.0 2.1 1 1 1 2 2 2 0 WTAP/Mum2p family CHD5 PF04420.14 ORF98900 - 1.7 8.5 5.7 0.99 9.2 2.0 1.9 1 1 1 2 2 2 0 CHD5-like protein RPW8 PF05659.11 ORF98900 - 1.7 8.3 10.0 9.9 5.9 5.7 2.6 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Mst1_SARAH PF11629.8 ORF98900 - 1.8 8.7 11.7 0.5 10.5 1.0 2.6 2 1 0 2 2 2 0 C terminal SARAH domain of Mst1 Sas10_Utp3 PF04000.15 ORF98900 - 5.7 7.6 8.6 1.9e+02 2.8 8.6 2.5 1 1 0 1 1 1 0 Sas10/Utp3/C1D family ACCA PF03255.14 ORF98900 - 8.5 6.2 9.8 30 4.5 9.8 1.9 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF1045 PF06299.12 ORF98633 - 0.056 13.4 0.1 0.08 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1045) PseudoU_synth_2 PF00849.22 ORF98550 - 1.2e-05 25.4 0.1 1.7e-05 24.9 0.1 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF5585 PF17823.1 ORF98295 - 1.1 8.1 10.5 1.2 8.0 10.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5585) DUF2663 PF10864.8 ORF98097 - 0.023 15.1 1.7 0.024 15.0 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) YtzH PF14165.6 ORF98097 - 0.039 14.3 0.0 0.054 13.9 0.0 1.2 1 0 0 1 1 1 0 YtzH-like protein Aa_trans PF01490.18 ORF98097 - 0.047 12.4 4.4 0.052 12.3 4.4 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein DUF488 PF04343.13 ORF97583 - 9.4e-27 94.0 0.5 1e-25 90.7 0.5 1.9 1 1 0 1 1 1 1 Protein of unknown function, DUF488 Methyltransf_2 PF00891.18 ORF97453 - 0.0074 15.6 0.0 0.008 15.5 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_12 PF08242.12 ORF97453 - 0.0093 16.7 0.0 0.013 16.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain DUF3338 PF11819.8 ORF97380 - 0.075 13.0 6.0 0.078 13.0 4.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3338) Ank_4 PF13637.6 ORF97006 - 1.2e-11 44.9 0.0 3.1e-05 24.4 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF97006 - 5.6e-10 39.3 0.1 0.0014 18.9 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF97006 - 1.7e-09 37.7 0.0 0.00011 22.5 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank_2 PF12796.7 ORF97006 - 2.9e-08 34.2 0.2 9.8e-07 29.3 0.1 2.1 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF97006 - 1.1e-05 25.3 0.1 5.8 7.8 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat DUF1115 PF06544.12 ORF96818 - 2.1e-06 27.9 0.0 3.2e-06 27.3 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1115) Rhabdo_ncap_2 PF03216.13 ORF94090 - 0.073 12.5 0.0 0.073 12.5 0.0 1.1 1 0 0 1 1 1 0 Rhabdovirus nucleoprotein Carb_anhydrase PF00194.21 ORF93547 - 4.1e-11 42.9 2.1 7.8e-11 42.0 2.1 1.4 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase 2OG-FeII_Oxy_3 PF13640.6 ORF93547 - 0.11 13.5 0.0 0.12 13.3 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily SSP160 PF06933.11 ORF93534 - 0.041 12.1 18.4 0.04 12.1 18.4 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Dicty_REP PF05086.12 ORF93534 - 4.3 5.2 8.8 4.9 5.0 8.8 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein FSA_C PF10479.9 ORF93534 - 5.8 4.9 12.9 5.9 4.9 12.9 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus MetJ PF01340.20 ORF92538 - 3.6e-59 196.8 0.0 4.1e-59 196.6 0.0 1.0 1 0 0 1 1 1 1 Met Apo-repressor, MetJ SWI2_SNF2 PF18766.1 ORF92538 - 0.062 13.0 0.0 0.068 12.8 0.0 1.1 1 0 0 1 1 1 0 SWI2/SNF2 ATPase AphA_like PF14557.6 ORF92538 - 0.089 12.5 0.0 0.099 12.4 0.0 1.2 1 0 0 1 1 1 0 Putative AphA-like transcriptional regulator MTS_N PF08468.11 ORF90660 - 0.0023 18.0 0.5 0.0033 17.5 0.4 1.3 1 1 0 1 1 1 1 Methyltransferase small domain N-terminal TRAF_BIRC3_bd PF16673.5 ORF90660 - 0.018 14.8 1.0 0.032 14.0 0.2 1.8 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain GTP_EFTU_D3 PF03143.17 ORF90660 - 0.11 12.8 0.1 0.12 12.6 0.1 1.3 1 1 0 1 1 1 0 Elongation factor Tu C-terminal domain ATP-synt_E_2 PF08112.11 ORF90564 - 0.014 15.7 1.1 0.28 11.5 0.2 2.2 2 0 0 2 2 2 0 ATP synthase epsilon subunit PRANC PF09372.10 ORF90564 - 0.033 14.5 0.2 0.045 14.1 0.2 1.2 1 0 0 1 1 1 0 PRANC domain Gpr1_Fun34_YaaH PF01184.19 ORF88856 - 0.0077 15.9 4.4 0.0085 15.7 4.4 1.1 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DUF4123 PF13503.6 ORF88662 - 0.087 13.2 0.6 0.12 12.7 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4123) DUF5546 PF17700.1 ORF88469 - 0.042 14.2 5.5 0.044 14.2 5.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5546) Vitellogenin_N PF01347.22 ORF87977 - 0.051 12.0 0.6 0.054 11.9 0.6 1.0 1 0 0 1 1 1 0 Lipoprotein amino terminal region MT PF12777.7 ORF87204 - 2.3e-14 53.2 0.5 2.6e-14 53.0 0.5 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Exonuc_VII_S PF02609.16 ORF87204 - 0.0041 17.2 2.7 0.006 16.6 2.7 1.2 1 0 0 1 1 1 1 Exonuclease VII small subunit HrpB7 PF09486.10 ORF87204 - 0.019 15.4 1.2 0.022 15.1 1.2 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) Utp12 PF04003.12 ORF87204 - 0.052 13.8 0.0 0.077 13.3 0.0 1.2 1 0 0 1 1 1 0 Dip2/Utp12 Family CCDC-167 PF15188.6 ORF87204 - 0.06 13.7 0.1 0.085 13.2 0.1 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Actin PF00022.19 ORF87183 - 6.8e-14 51.3 0.0 7.5e-14 51.2 0.0 1.0 1 0 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF87183 - 0.034 13.0 0.0 0.039 12.8 0.0 1.1 1 0 0 1 1 1 0 MreB/Mbl protein Peptidase_S49_N PF08496.10 ORF87073 - 0.014 15.5 6.0 0.016 15.3 6.0 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal AP3D1 PF06375.11 ORF87073 - 0.46 10.7 8.6 0.5 10.6 8.6 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF4462 PF14692.6 ORF86865 - 0.093 12.2 1.2 20 4.7 0.1 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4462) FGF PF00167.18 ORF86716 - 0.011 15.8 0.0 0.015 15.4 0.0 1.1 1 0 0 1 1 1 0 Fibroblast growth factor Ras PF00071.22 ORF86612 - 1.2e-16 60.7 0.1 1.3e-16 60.6 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF86612 - 1.5e-13 51.0 0.1 1.7e-13 50.9 0.1 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF86612 - 0.00063 19.2 0.1 0.00063 19.2 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF86612 - 0.025 14.1 0.0 0.027 14.0 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain MTS_N PF08468.11 ORF84287 - 0.0023 18.0 0.5 0.0033 17.5 0.4 1.3 1 1 0 1 1 1 1 Methyltransferase small domain N-terminal TRAF_BIRC3_bd PF16673.5 ORF84287 - 0.018 14.8 1.0 0.032 14.0 0.2 1.8 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain GTP_EFTU_D3 PF03143.17 ORF84287 - 0.11 12.8 0.1 0.12 12.6 0.1 1.3 1 1 0 1 1 1 0 Elongation factor Tu C-terminal domain RskA PF10099.9 ORF84243 - 6.5 7.0 12.8 7.9 6.7 12.8 1.3 1 1 0 1 1 1 0 Anti-sigma-K factor rskA Mpp10 PF04006.12 ORF84243 - 7.6 4.8 9.9 8.7 4.6 9.9 1.1 1 0 0 1 1 1 0 Mpp10 protein WW PF00397.26 ORF84208 - 0.057 13.5 2.4 0.12 12.5 2.4 1.5 1 0 0 1 1 1 0 WW domain AIP3 PF03915.13 ORF84208 - 0.082 12.0 1.8 0.093 11.8 1.8 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 DUF4107 PF13389.6 ORF84208 - 0.1 12.7 0.9 0.12 12.5 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4107) DUF948 PF06103.11 ORF84208 - 0.12 12.7 2.1 0.19 12.0 2.1 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) NPV_P10 PF05531.12 ORF84208 - 0.19 12.2 9.1 0.56 10.7 9.1 1.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein SlyX PF04102.12 ORF84208 - 0.36 11.5 5.4 3.4 8.4 5.3 2.1 1 1 0 1 1 1 0 SlyX UPF0239 PF06783.11 ORF84188 - 0.011 15.9 3.0 0.011 15.9 3.0 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0239) MTABC_N PF16185.5 ORF84188 - 0.22 11.0 0.0 0.3 10.5 0.0 1.2 1 1 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region His_Phos_1 PF00300.22 ORF83327 - 8.5e-09 35.4 0.0 1.1e-08 35.1 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PP2C PF00481.21 ORF82998 - 9.7e-13 48.3 0.0 1.1e-12 48.2 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF82998 - 1.7e-05 24.8 0.0 2e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Hormone_5 PF00184.17 ORF82211 - 0.22 12.4 3.5 0.34 11.8 3.5 1.4 1 1 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain Nucleoside_tran PF01733.18 ORF82106 - 5.4e-14 52.3 1.5 5.7e-14 52.2 1.5 1.0 1 0 0 1 1 1 1 Nucleoside transporter QueT PF06177.11 ORF82106 - 0.028 14.8 1.9 0.03 14.7 1.9 1.1 1 0 0 1 1 1 0 QueT transporter # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks225.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks225.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks225.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks225.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ubiquitin PF00240.23 ORF79940 - 2.1e-06 27.4 0.0 2.7e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF79940 - 0.0065 16.3 0.0 0.0082 16.0 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ADH_zinc_N_2 PF13602.6 ORF79575 - 0.00027 22.0 0.0 0.00028 21.9 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF4123 PF13503.6 ORF79504 - 0.087 13.2 0.6 0.12 12.7 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4123) PIF3 PF05006.12 ORF7707 - 0.007 16.4 0.2 0.0086 16.2 0.2 1.2 1 0 0 1 1 1 1 Per os infectivity factor 3 Mucin PF01456.17 ORF77008 - 0.65 10.0 19.9 0.76 9.8 19.9 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein N6-adenineMlase PF10237.9 ORF76329 - 7.3e-22 77.9 2.8 8.3e-22 77.7 2.8 1.0 1 0 0 1 1 1 1 Probable N6-adenine methyltransferase ATP-synt_E_2 PF08112.11 ORF75804 - 0.014 15.7 1.1 0.28 11.5 0.2 2.2 2 0 0 2 2 2 0 ATP synthase epsilon subunit PRANC PF09372.10 ORF75804 - 0.033 14.5 0.2 0.045 14.1 0.2 1.2 1 0 0 1 1 1 0 PRANC domain DUF2065 PF09838.9 ORF73825 - 0.085 12.9 0.3 0.17 11.9 0.1 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) Defensin_propep PF00879.18 ORF73324 - 0.78 10.1 0.1 0.78 10.1 0.1 2.3 1 1 1 2 2 2 0 Defensin propeptide PseudoU_synth_2 PF00849.22 ORF72597 - 1.2e-05 25.4 0.1 1.7e-05 24.9 0.1 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase CsgA PF17334.2 ORF72529 - 0.0048 17.6 3.7 0.044 14.5 3.3 2.1 1 1 0 1 1 1 1 Minor curli fiber component A PLDc_N PF13396.6 ORF70074 - 0.19 11.7 6.3 0.33 10.9 6.3 1.5 1 0 0 1 1 1 0 Phospholipase_D-nuclease N-terminal SrfB PF07520.11 ORF70022 - 0.19 9.6 2.0 0.21 9.4 2.0 1.0 1 0 0 1 1 1 0 Virulence factor SrfB Ring_hydroxyl_A PF00848.19 ORF69579 - 3.5e-09 36.9 0.0 4.1e-09 36.7 0.0 1.0 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) FXa_inhibition PF14670.6 ORF69338 - 0.11 12.8 2.5 0.35 11.2 0.2 2.4 2 1 0 2 2 2 0 Coagulation Factor Xa inhibitory site cEGF PF12662.7 ORF69338 - 10 6.2 8.1 5.9 6.9 0.9 2.8 2 1 0 2 2 2 0 Complement Clr-like EGF-like Ion_trans PF00520.31 ORF68559 - 1.9e-08 33.8 1.3 2.1e-08 33.7 1.3 1.0 1 0 0 1 1 1 1 Ion transport protein DBB PF14545.6 ORF68117 - 0.063 13.2 0.0 0.074 13.0 0.0 1.2 1 0 0 1 1 1 0 Dof, BCAP, and BANK (DBB) motif, DUF776 PF05604.11 ORF67302 - 0.024 15.0 6.5 0.027 14.9 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF776) Baculo_LEF-2 PF03041.14 ORF67302 - 0.087 12.5 0.4 0.097 12.3 0.4 1.1 1 0 0 1 1 1 0 lef-2 BshC PF10079.9 ORF67302 - 0.13 11.0 2.4 0.12 11.0 2.4 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC DiS_P_DiS PF06750.13 ORF66144 - 0.046 13.8 0.3 0.068 13.3 0.3 1.3 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain Pribosyltran_N PF13793.6 ORF66002 - 0.031 14.2 0.2 0.042 13.8 0.2 1.2 1 0 0 1 1 1 0 N-terminal domain of ribose phosphate pyrophosphokinase Ras PF00071.22 ORF64674 - 5.3e-32 110.6 0.1 5.7e-32 110.6 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF64674 - 1.9e-24 86.1 0.0 2.1e-24 86.0 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF64674 - 1.6e-05 24.5 0.0 1.6e-05 24.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF64674 - 0.0025 17.9 0.0 0.0029 17.7 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase DHHC PF01529.20 ORF64373 - 7.2e-09 35.9 7.6 7.2e-09 35.9 7.6 1.6 2 0 0 2 2 2 1 DHHC palmitoyltransferase ThrE PF06738.12 ORF63548 - 2.9e-26 92.3 5.8 3.2e-26 92.2 5.8 1.0 1 0 0 1 1 1 1 Putative threonine/serine exporter ThrE_2 PF12821.7 ORF63548 - 2.5e-05 24.4 4.0 3e-05 24.2 4.0 1.1 1 0 0 1 1 1 1 Threonine/Serine exporter, ThrE SpoIIIAC PF06686.11 ORF63548 - 0.19 11.9 6.3 2.4 8.4 0.1 2.5 3 0 0 3 3 3 0 Stage III sporulation protein AC/AD protein family DUF1616 PF07760.11 ORF63548 - 0.26 10.7 3.4 0.32 10.4 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) DUF3487 PF11990.8 ORF63424 - 0.078 12.9 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DUF3069 PF11269.8 ORF63424 - 0.079 13.2 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3069) Bac_DNA_binding PF00216.21 ORF63096 - 7.3e-13 48.5 2.3 8.8e-13 48.3 2.3 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein HTH_IclR PF09339.10 ORF63096 - 0.059 13.2 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Inhibitor_Mig-6 PF11555.8 ORF6271 - 0.19 11.8 0.3 0.27 11.4 0.3 1.5 1 1 0 1 1 1 0 EGFR receptor inhibitor Mig-6 Tho2 PF11262.8 ORF62111 - 0.0098 15.1 3.9 0.012 14.8 3.9 1.1 1 0 0 1 1 1 1 Transcription factor/nuclear export subunit protein 2 DUF4455 PF14643.6 ORF62111 - 0.015 13.9 5.6 0.019 13.7 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4455) HAUS6_N PF14661.6 ORF62111 - 0.064 12.8 2.6 0.076 12.6 2.6 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF641 PF04859.12 ORF62111 - 0.1 13.0 4.1 0.13 12.6 4.1 1.4 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF4407 PF14362.6 ORF62111 - 0.12 11.8 1.0 0.12 11.8 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FAM76 PF16046.5 ORF62111 - 0.12 11.7 5.8 0.13 11.6 5.8 1.0 1 0 0 1 1 1 0 FAM76 protein DUF2205 PF10224.9 ORF62111 - 0.16 12.0 5.5 0.075 13.0 3.4 1.7 2 0 0 2 2 2 0 Short coiled-coil protein DUF2207 PF09972.9 ORF62111 - 0.47 9.2 5.3 0.49 9.1 5.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Cons_hypoth95 PF03602.15 ORF6111 - 0.00023 20.8 0.5 0.00027 20.7 0.5 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 dCache_1 PF02743.18 ORF60611 - 0.27 11.0 4.1 0.29 10.9 4.1 1.1 1 0 0 1 1 1 0 Cache domain DUF5339 PF17274.2 ORF60611 - 4.8 8.1 13.5 0.24 12.3 4.9 2.3 1 1 2 3 3 3 0 Family of unknown function (DUF5339) CAP PF00188.26 ORF60019 - 0.026 15.4 0.0 0.038 14.8 0.0 1.3 1 0 0 1 1 1 0 Cysteine-rich secretory protein family DUF4298 PF14131.6 ORF58764 - 0.001 19.0 0.4 0.0015 18.5 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4298) TMF_TATA_bd PF12325.8 ORF58764 - 0.0065 16.7 7.2 0.0077 16.4 7.2 1.3 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding TSKS PF15358.6 ORF58764 - 0.013 13.9 7.3 0.014 13.8 7.3 1.0 1 0 0 1 1 1 0 Testis-specific serine kinase substrate MCU PF04678.13 ORF58764 - 0.013 15.6 1.3 0.013 15.6 1.3 1.5 1 1 1 2 2 2 0 Mitochondrial calcium uniporter V-ATPase_G_2 PF16999.5 ORF58764 - 0.015 15.7 5.5 0.02 15.3 5.5 1.2 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit LidA_Long_CC PF18641.1 ORF58764 - 0.022 14.8 2.6 0.024 14.7 0.8 1.8 1 1 1 2 2 2 0 LidA long coiled-coil domain GAS PF13851.6 ORF58764 - 0.024 14.0 8.6 0.029 13.7 8.6 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding CLZ PF16526.5 ORF58764 - 0.028 14.8 3.2 0.028 14.8 3.2 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ABC_tran_CTD PF16326.5 ORF58764 - 0.032 14.5 9.9 0.46 10.8 4.4 2.2 2 0 0 2 2 2 0 ABC transporter C-terminal domain Occludin_ELL PF07303.13 ORF58764 - 0.037 14.8 1.5 0.055 14.2 1.5 1.2 1 0 0 1 1 1 0 Occludin homology domain TMCO5 PF14992.6 ORF58764 - 0.067 12.8 6.1 0.069 12.7 6.1 1.0 1 0 0 1 1 1 0 TMCO5 family DUF4200 PF13863.6 ORF58764 - 0.096 13.1 8.6 0.088 13.2 2.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) ADIP PF11559.8 ORF58764 - 0.11 12.6 7.2 0.31 11.1 6.9 1.8 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF812 PF05667.11 ORF58764 - 0.33 9.8 9.0 1.3 7.9 2.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Spc7 PF08317.11 ORF58764 - 0.34 9.7 7.8 0.39 9.5 7.8 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein V_ATPase_I PF01496.19 ORF58764 - 0.34 8.8 3.0 0.32 8.9 3.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4407 PF14362.6 ORF58764 - 0.38 10.1 4.5 0.43 9.9 4.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) APG6_N PF17675.1 ORF58764 - 0.43 11.1 9.9 0.86 10.1 9.0 1.7 1 1 1 2 2 2 0 Apg6 coiled-coil region Tho2 PF11262.8 ORF58764 - 0.68 9.1 4.2 0.64 9.2 1.5 1.8 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 DUF4427 PF14468.6 ORF58204 - 0.067 13.3 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4427) NB PF04159.13 ORF58092 - 3.1 7.9 7.5 1.7 8.7 4.0 1.9 1 1 1 2 2 2 0 NB glycoprotein Smim3 PF17307.2 ORF57983 - 0.83 9.2 5.6 0.2 11.2 1.1 2.2 1 1 1 2 2 2 0 Small integral membrane protein 3 MSA-2c PF12238.8 ORF56827 - 2 8.4 3.8 2.2 8.3 3.8 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c PUB PF09409.10 ORF56120 - 0.00011 22.1 0.1 0.00018 21.4 0.1 1.4 1 1 0 1 1 1 1 PUB domain RNase_Zc3h12a_2 PF14626.6 ORF56009 - 0.065 13.4 0.0 0.07 13.4 0.0 1.2 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain Pkinase PF00069.25 ORF55779 - 1e-18 67.7 1.2 1.1e-18 67.6 1.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF55779 - 4.8e-12 45.7 0.7 5.6e-12 45.5 0.7 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FAM72 PF14976.6 ORF53447 - 0.13 12.4 0.9 0.18 11.9 0.9 1.2 1 0 0 1 1 1 0 FAM72 protein PseudoU_synth_2 PF00849.22 ORF53289 - 1.2e-05 25.4 0.1 1.7e-05 24.9 0.1 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase PRR22 PF15776.5 ORF53194 - 0.21 10.9 0.0 0.25 10.7 0.0 1.0 1 0 0 1 1 1 0 Proline-rich protein family 22 UPF0697 PF15117.6 ORF53032 - 0.13 12.4 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0697 Peptidase_M74 PF03411.13 ORF53031 - 0.13 11.8 0.1 0.13 11.8 0.1 1.0 1 0 0 1 1 1 0 Penicillin-insensitive murein endopeptidase SURF1 PF02104.15 ORF52336 - 6.7e-05 23.2 0.0 7.7e-05 23.0 0.0 1.0 1 0 0 1 1 1 1 SURF1 family GLTP PF08718.11 ORF52027 - 1.9e-12 47.7 0.2 3e-12 47.1 0.2 1.3 1 0 0 1 1 1 1 Glycolipid transfer protein (GLTP) Mucin PF01456.17 ORF51213 - 0.48 10.4 35.5 0.62 10.1 35.5 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein Glyco_transf_22 PF03901.17 ORF51213 - 2.4 7.3 11.1 2.7 7.1 11.1 1.1 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family TMEM220 PF15071.6 ORF51213 - 6.3 7.6 7.8 8.9 7.1 7.6 1.3 1 1 0 1 1 1 0 Transmembrane family 220, helix Phosducin PF02114.16 ORF50998 - 0.091 11.7 3.4 1.5 7.7 0.3 2.0 1 1 1 2 2 2 0 Phosducin DD_K PF12121.8 ORF50962 - 0.7 10.1 0.0 0.7 10.1 0.0 2.9 3 0 0 3 3 3 0 Dermaseptin Amidase_5 PF05382.13 ORF49642 - 0.014 15.3 0.2 0.02 14.8 0.2 1.3 1 0 0 1 1 1 0 Bacteriophage peptidoglycan hydrolase DUF2865 PF11064.8 ORF49642 - 0.095 13.1 0.1 0.13 12.7 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2865) fn3 PF00041.21 ORF49469 - 0.068 13.5 1.5 0.081 13.3 0.2 1.7 2 0 0 2 2 2 0 Fibronectin type III domain VWA_N PF08399.11 ORF49469 - 0.12 12.9 1.4 0.15 12.6 1.4 1.4 1 1 0 1 1 1 0 VWA N-terminal DnaJ PF00226.31 ORF49392 - 1.1e-13 51.1 0.3 1.4e-13 50.7 0.3 1.1 1 0 0 1 1 1 1 DnaJ domain SepSecS PF05889.13 ORF49063 - 0.068 11.9 0.5 0.076 11.7 0.5 1.0 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS IAT_beta PF11924.8 ORF48787 - 0.014 14.8 0.2 0.016 14.6 0.2 1.0 1 0 0 1 1 1 0 Inverse autotransporter, beta-domain WASH-7_C PF14746.6 ORF48781 - 0.084 12.6 0.0 0.091 12.4 0.0 1.1 1 0 0 1 1 1 0 WASH complex subunit 7, C-terminal MMS19_N PF14500.6 ORF4834 - 6.5e-05 22.6 0.0 8.9e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Dos2-interacting transcription regulator of RNA-Pol-II Bac_DNA_binding PF00216.21 ORF47387 - 7.3e-13 48.5 2.3 8.8e-13 48.3 2.3 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein HTH_IclR PF09339.10 ORF47387 - 0.059 13.2 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Noelin-1 PF12308.8 ORF4475 - 0.0042 17.0 0.4 0.0057 16.6 0.4 1.2 1 0 0 1 1 1 1 Neurogenesis glycoprotein Thioredoxin PF00085.20 ORF44641 - 6e-13 48.7 0.3 6.8e-13 48.5 0.3 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF44641 - 5.7e-05 23.4 0.8 0.0011 19.2 0.1 2.3 1 1 1 2 2 2 1 Thioredoxin-like DIM1 PF02966.16 ORF44641 - 0.006 16.4 0.1 0.006 16.4 0.1 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_2 PF13098.6 ORF44641 - 0.025 15.0 0.2 0.071 13.6 0.2 1.7 1 1 0 1 1 1 0 Thioredoxin-like domain Phosducin PF02114.16 ORF44641 - 0.027 13.4 0.0 0.03 13.3 0.0 1.0 1 0 0 1 1 1 0 Phosducin AhpC-TSA PF00578.21 ORF44641 - 0.053 13.5 0.1 0.092 12.7 0.0 1.4 1 1 0 1 1 1 0 AhpC/TSA family Thioredoxin_3 PF13192.6 ORF44641 - 0.066 13.3 0.1 0.091 12.8 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin domain DUF1045 PF06299.12 ORF42378 - 0.056 13.4 0.1 0.08 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1045) DOMON PF03351.17 ORF42267 - 0.013 15.7 0.0 0.016 15.4 0.0 1.1 1 0 0 1 1 1 0 DOMON domain DUF916 PF06030.12 ORF42267 - 0.14 12.2 1.3 12 6.0 0.3 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF916) MtrD PF04207.12 ORF41006 - 0.05 13.3 0.7 0.064 12.9 0.7 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit D DUF4736 PF15883.5 ORF41006 - 0.18 11.5 1.2 0.24 11.1 1.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4736) Dicty_CTDC PF00526.18 ORF40333 - 0.27 11.2 1.9 0.79 9.7 0.1 2.3 2 0 0 2 2 2 0 Dictyostelium (slime mold) repeat Amidase_3 PF01520.18 ORF39297 - 0.24 11.5 0.0 0.29 11.3 0.0 1.0 1 0 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase Reprolysin_4 PF13583.6 ORF39074 - 0.006 16.2 0.7 0.0072 16.0 0.7 1.1 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like DUF4114 PF13448.6 ORF39074 - 0.28 12.0 3.4 0.46 11.3 3.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4114) TadE PF07811.12 ORF38685 - 0.073 13.4 1.1 0.12 12.7 1.1 1.3 1 0 0 1 1 1 0 TadE-like protein Orf78 PF06024.12 ORF38685 - 0.092 13.1 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Orf78 (ac78) E1_4HB PF16191.5 ORF38083 - 0.086 13.1 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle Aa_trans PF01490.18 ORF36252 - 0.001 17.9 2.0 0.0013 17.5 2.0 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein Importin_rep_4 PF18808.1 ORF35645 - 0.00031 21.0 0.9 0.00031 21.0 0.9 1.7 1 1 1 2 2 2 1 Importin repeat UME PF08064.13 ORF35645 - 0.0013 18.7 0.1 0.0061 16.5 0.1 1.8 1 1 1 2 2 2 1 UME (NUC010) domain WW PF00397.26 ORF34555 - 0.057 13.5 2.4 0.12 12.5 2.4 1.5 1 0 0 1 1 1 0 WW domain AIP3 PF03915.13 ORF34555 - 0.082 12.0 1.8 0.093 11.8 1.8 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 DUF4107 PF13389.6 ORF34555 - 0.1 12.7 0.9 0.12 12.5 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4107) DUF948 PF06103.11 ORF34555 - 0.12 12.7 2.1 0.19 12.0 2.1 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) NPV_P10 PF05531.12 ORF34555 - 0.19 12.2 9.1 0.56 10.7 9.1 1.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein SlyX PF04102.12 ORF34555 - 0.36 11.5 5.4 3.4 8.4 5.3 2.1 1 1 0 1 1 1 0 SlyX AAA_31 PF13614.6 ORF32776 - 0.11 12.4 2.5 0.11 12.4 2.5 1.1 1 0 0 1 1 1 0 AAA domain Bac_surface_Ag PF01103.23 ORF32078 - 0.00058 19.5 0.0 0.00075 19.1 0.0 1.0 1 0 0 1 1 1 1 Surface antigen Tom22 PF04281.13 ORF32030 - 0.17 11.7 0.1 0.24 11.2 0.1 1.3 1 1 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 DUF3338 PF11819.8 ORF31906 - 0.075 13.0 6.0 0.078 13.0 4.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3338) Thioredoxin PF00085.20 ORF31867 - 5.7e-32 109.8 0.2 6.6e-32 109.6 0.2 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF31867 - 3.8e-08 33.7 0.4 1.1e-06 29.1 0.4 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 ORF31867 - 6.5e-07 29.0 0.1 7.8e-07 28.7 0.1 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 ORF31867 - 1.2e-06 28.7 0.0 0.0022 18.3 0.0 2.4 1 1 1 2 2 2 2 Thioredoxin-like DIM1 PF02966.16 ORF31867 - 1.6e-06 27.9 0.3 1.8e-06 27.8 0.3 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF31867 - 3.2e-06 27.0 0.1 3.5e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF31867 - 2.1e-05 24.4 0.1 0.00014 21.7 0.1 1.9 1 1 0 1 1 1 1 AhpC/TSA family DUF2847 PF11009.8 ORF31867 - 3e-05 23.9 0.0 3.9e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2847) Thioredoxin_7 PF13899.6 ORF31867 - 0.00015 21.9 0.1 0.00027 21.1 0.1 1.5 1 1 0 1 1 1 1 Thioredoxin-like HyaE PF07449.11 ORF31867 - 0.0026 17.7 0.0 0.0041 17.0 0.0 1.5 1 1 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Phosducin PF02114.16 ORF31867 - 0.0051 15.8 0.0 0.0057 15.6 0.0 1.0 1 0 0 1 1 1 1 Phosducin PCYCGC PF13798.6 ORF31867 - 0.081 12.8 0.4 0.32 10.8 0.1 2.0 1 1 0 2 2 2 0 Protein of unknown function with PCYCGC motif Thioredoxin_5 PF13743.6 ORF31867 - 0.088 12.5 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Thioredoxin Disulph_isomer PF06491.11 ORF31867 - 0.095 12.8 0.0 0.18 11.9 0.0 1.5 1 1 0 1 1 1 0 Disulphide isomerase Glutaredoxin PF00462.24 ORF31867 - 0.096 12.9 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin Lebercilin PF15619.6 ORF31581 - 3.8e-06 26.7 10.0 4.2e-06 26.6 10.0 1.0 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Laminin_II PF06009.12 ORF31581 - 4.6e-05 23.5 4.0 5.7e-05 23.1 4.0 1.2 1 0 0 1 1 1 1 Laminin Domain II DUF4472 PF14739.6 ORF31581 - 4.9e-05 24.0 10.8 6.2e-05 23.7 10.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4472) Spc7 PF08317.11 ORF31581 - 6.5e-05 22.0 10.4 7.3e-05 21.8 10.4 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein ADIP PF11559.8 ORF31581 - 8.3e-05 22.7 9.1 0.00014 22.0 9.1 1.4 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Atg14 PF10186.9 ORF31581 - 8.4e-05 21.8 7.2 0.0001 21.5 7.2 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 EzrA PF06160.12 ORF31581 - 0.0001 20.7 10.4 0.00012 20.4 10.4 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA Fez1 PF06818.15 ORF31581 - 0.00012 22.6 8.6 0.00018 22.1 8.6 1.3 1 0 0 1 1 1 1 Fez1 DHR10 PF18595.1 ORF31581 - 0.00018 21.5 10.4 0.00024 21.1 10.4 1.3 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain ATG16 PF08614.11 ORF31581 - 0.00019 21.7 9.4 0.00022 21.5 9.4 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF948 PF06103.11 ORF31581 - 0.00045 20.4 3.1 0.00064 19.9 3.1 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Taxilin PF09728.9 ORF31581 - 0.00053 19.3 11.1 0.00076 18.7 11.1 1.3 1 1 0 1 1 1 1 Myosin-like coiled-coil protein IFT57 PF10498.9 ORF31581 - 0.00062 18.8 6.0 0.00071 18.6 6.0 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF4201 PF13870.6 ORF31581 - 0.00063 19.5 12.4 0.00079 19.2 12.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) AAA_13 PF13166.6 ORF31581 - 0.00068 18.4 8.9 0.00075 18.3 8.9 1.0 1 0 0 1 1 1 1 AAA domain Cast PF10174.9 ORF31581 - 0.00093 17.6 8.6 0.0011 17.3 8.6 1.0 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone HAP1_N PF04849.13 ORF31581 - 0.00093 18.5 10.8 0.001 18.3 10.8 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region DUF641 PF04859.12 ORF31581 - 0.00094 19.5 8.8 0.097 13.0 6.4 2.1 1 1 1 2 2 2 2 Plant protein of unknown function (DUF641) DUF724 PF05266.14 ORF31581 - 0.0013 18.5 8.5 0.0019 18.0 8.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF31581 - 0.0016 18.5 5.0 0.002 18.2 5.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF31581 - 0.0016 17.8 8.2 0.0018 17.6 8.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) BST2 PF16716.5 ORF31581 - 0.0018 18.8 7.4 0.0018 18.8 7.4 2.0 1 1 1 2 2 2 1 Bone marrow stromal antigen 2 Tropomyosin_1 PF12718.7 ORF31581 - 0.002 18.3 19.5 0.015 15.4 15.3 2.0 1 1 1 2 2 2 2 Tropomyosin like TPR_MLP1_2 PF07926.12 ORF31581 - 0.0021 18.1 13.2 0.0059 16.7 9.0 2.0 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein DUF745 PF05335.13 ORF31581 - 0.0023 17.7 3.1 0.0027 17.5 3.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF745) DUF2046 PF09755.9 ORF31581 - 0.0023 17.2 10.2 0.0027 17.0 10.2 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) DUF16 PF01519.16 ORF31581 - 0.0031 18.0 11.2 0.096 13.2 7.5 2.0 1 1 1 2 2 2 2 Protein of unknown function DUF16 DUF3584 PF12128.8 ORF31581 - 0.0035 15.0 7.3 0.004 14.8 7.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) GAS PF13851.6 ORF31581 - 0.0041 16.5 13.8 0.011 15.1 13.7 1.5 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding HOOK PF05622.12 ORF31581 - 0.0042 15.3 11.9 0.0043 15.3 11.9 1.0 1 0 0 1 1 1 1 HOOK protein Seryl_tRNA_N PF02403.22 ORF31581 - 0.0048 17.1 9.9 0.0075 16.5 9.9 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF4200 PF13863.6 ORF31581 - 0.005 17.2 15.1 0.038 14.4 15.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4200) Fib_alpha PF08702.10 ORF31581 - 0.0053 16.9 9.0 0.18 12.0 1.1 2.2 1 1 0 2 2 2 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF31581 - 0.0053 17.0 7.9 0.0073 16.6 7.5 1.5 1 1 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 CENP-F_leu_zip PF10473.9 ORF31581 - 0.0055 16.7 13.9 0.0062 16.6 13.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Csm1_N PF18504.1 ORF31581 - 0.0056 17.0 13.3 0.21 11.9 5.0 2.4 1 1 1 2 2 2 2 Csm1 N-terminal domain Tropomyosin PF00261.20 ORF31581 - 0.0059 16.0 12.5 0.0072 15.7 12.5 1.2 1 0 0 1 1 1 1 Tropomyosin CC2-LZ PF16516.5 ORF31581 - 0.009 16.4 13.5 0.12 12.7 9.9 2.1 1 1 1 2 2 2 2 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator CENP-H PF05837.12 ORF31581 - 0.012 16.1 7.0 0.015 15.7 7.0 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) KxDL PF10241.9 ORF31581 - 0.012 15.9 6.3 0.18 12.1 6.3 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein DUF812 PF05667.11 ORF31581 - 0.012 14.5 13.6 0.025 13.5 13.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF812) HMMR_N PF15905.5 ORF31581 - 0.014 14.9 15.6 0.038 13.5 15.6 1.6 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal PKcGMP_CC PF16808.5 ORF31581 - 0.015 15.1 16.5 1.3 8.9 0.0 4.0 2 1 2 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Exonuc_VII_L PF02601.15 ORF31581 - 0.016 14.8 2.8 0.018 14.6 2.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit THOC7 PF05615.13 ORF31581 - 0.016 15.4 11.9 0.42 10.9 11.9 2.0 1 1 0 1 1 1 0 Tho complex subunit 7 BRE1 PF08647.11 ORF31581 - 0.019 15.0 14.4 0.035 14.2 14.4 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase T3SSipB PF16535.5 ORF31581 - 0.022 15.2 7.0 0.038 14.5 7.0 1.4 1 1 0 1 1 1 0 Type III cell invasion protein SipB TMF_TATA_bd PF12325.8 ORF31581 - 0.023 14.9 14.3 0.51 10.6 14.3 2.3 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Prefoldin PF02996.17 ORF31581 - 0.023 14.6 13.6 0.11 12.4 2.5 2.1 1 1 0 2 2 2 0 Prefoldin subunit DivIC PF04977.15 ORF31581 - 0.024 14.4 16.5 0.15 11.9 4.6 2.5 1 1 1 2 2 2 0 Septum formation initiator Phage_GPO PF05929.11 ORF31581 - 0.027 14.1 5.4 0.038 13.6 5.4 1.3 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase TMPIT PF07851.13 ORF31581 - 0.028 13.7 7.7 0.031 13.5 7.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein HemX PF04375.14 ORF31581 - 0.029 13.7 5.4 0.034 13.4 5.4 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Golgin_A5 PF09787.9 ORF31581 - 0.03 13.8 11.2 0.034 13.6 11.2 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 LOH1CR12 PF10158.9 ORF31581 - 0.03 14.3 2.9 0.035 14.1 2.9 1.2 1 0 0 1 1 1 0 Tumour suppressor protein Occludin_ELL PF07303.13 ORF31581 - 0.031 15.0 5.8 0.084 13.6 5.9 1.8 1 1 0 1 1 1 0 Occludin homology domain Sec8_exocyst PF04048.14 ORF31581 - 0.033 14.1 6.8 0.27 11.1 1.6 2.0 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain GrpE PF01025.19 ORF31581 - 0.034 13.8 15.0 1.2 8.8 15.0 2.1 1 1 0 1 1 1 0 GrpE Prominin PF05478.11 ORF31581 - 0.039 11.9 2.8 0.041 11.9 2.8 1.0 1 0 0 1 1 1 0 Prominin DUF4407 PF14362.6 ORF31581 - 0.04 13.3 8.1 0.067 12.5 8.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FPP PF05911.11 ORF31581 - 0.041 12.1 12.4 0.048 11.9 12.4 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil FapA PF03961.13 ORF31581 - 0.042 12.4 9.6 0.049 12.2 9.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A OmpH PF03938.14 ORF31581 - 0.046 14.0 14.1 0.11 12.9 14.1 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) GldM_N PF12081.8 ORF31581 - 0.047 13.8 7.0 0.057 13.5 7.0 1.2 1 0 0 1 1 1 0 GldM N-terminal domain TMF_DNA_bd PF12329.8 ORF31581 - 0.049 13.6 18.6 0.18 11.8 14.0 2.2 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF5082 PF16888.5 ORF31581 - 0.051 13.9 10.9 1.9 8.8 6.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Phage_GP20 PF06810.11 ORF31581 - 0.051 13.4 17.4 1.2 8.9 17.4 2.0 1 1 0 1 1 1 0 Phage minor structural protein GP20 UPF0242 PF06785.11 ORF31581 - 0.052 13.7 15.2 0.083 13.0 15.2 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus E2R135 PF11570.8 ORF31581 - 0.052 13.8 5.0 0.16 12.3 5.0 1.7 1 1 0 1 1 1 0 Coiled-coil receptor-binding R-domain of colicin E2 DASH_Spc34 PF08657.10 ORF31581 - 0.058 13.2 10.0 0.18 11.6 10.0 1.7 1 1 0 1 1 1 0 DASH complex subunit Spc34 YtxH PF12732.7 ORF31581 - 0.066 13.8 4.9 0.19 12.3 4.9 1.8 1 1 0 1 1 1 0 YtxH-like protein DUF2968 PF11180.8 ORF31581 - 0.066 12.8 4.6 0.099 12.3 4.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Jnk-SapK_ap_N PF09744.9 ORF31581 - 0.066 13.4 12.6 0.093 13.0 12.6 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Spc24 PF08286.11 ORF31581 - 0.074 13.3 14.3 0.86 9.9 6.3 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Baculo_PEP_C PF04513.12 ORF31581 - 0.077 13.0 3.7 0.16 12.0 3.6 1.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Tho2 PF11262.8 ORF31581 - 0.078 12.2 6.6 0.087 12.0 6.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Sec2p PF06428.11 ORF31581 - 0.084 12.8 12.9 0.3 11.1 11.2 2.0 1 1 2 3 3 3 0 GDP/GTP exchange factor Sec2p CENP-Q PF13094.6 ORF31581 - 0.096 12.9 13.2 0.89 9.7 13.1 1.9 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit DLP_helical PF18709.1 ORF31581 - 0.097 11.9 8.3 0.21 10.8 8.2 1.6 1 1 1 2 2 2 0 Dynamin-like helical domain Hrs_helical PF12210.8 ORF31581 - 0.097 13.2 8.1 1.2 9.7 8.1 2.0 1 1 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Snapin_Pallidin PF14712.6 ORF31581 - 0.098 13.1 10.3 0.22 12.0 5.3 2.0 1 1 0 1 1 1 0 Snapin/Pallidin FlaC_arch PF05377.11 ORF31581 - 0.1 13.0 11.9 0.42 11.0 3.1 2.4 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) DUF4298 PF14131.6 ORF31581 - 0.1 12.6 9.5 0.79 9.7 0.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) TolA_bind_tri PF16331.5 ORF31581 - 0.11 12.6 10.3 0.86 9.7 10.2 2.1 1 1 0 1 1 1 0 TolA binding protein trimerisation WXG100 PF06013.12 ORF31581 - 0.11 12.7 2.5 0.66 10.2 0.4 2.1 1 1 1 2 2 2 0 Proteins of 100 residues with WXG HrpB7 PF09486.10 ORF31581 - 0.11 12.8 7.1 0.21 11.9 7.1 1.5 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) PRKG1_interact PF15898.5 ORF31581 - 0.13 13.2 9.3 0.78 10.7 3.7 2.0 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain FlxA PF14282.6 ORF31581 - 0.13 12.2 12.3 3.3 7.7 12.4 2.0 1 1 0 1 1 1 0 FlxA-like protein Lzipper-MIP1 PF14389.6 ORF31581 - 0.13 12.5 10.3 0.6 10.4 3.2 2.4 2 1 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 Cep57_MT_bd PF06657.13 ORF31581 - 0.14 12.6 9.4 0.28 11.7 8.9 1.7 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 USP8_interact PF08941.10 ORF31581 - 0.16 11.8 6.5 0.82 9.5 1.2 2.0 1 1 0 2 2 2 0 USP8 interacting Med9 PF07544.13 ORF31581 - 0.18 11.9 7.4 0.47 10.6 7.4 1.8 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 MetOD2 PF18548.1 ORF31581 - 0.18 11.9 5.9 0.87 9.7 0.5 2.2 2 0 0 2 2 2 0 Metanogen output domain 2 Lectin_N PF03954.14 ORF31581 - 0.19 11.5 7.8 0.31 10.8 2.2 2.2 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Swi5 PF07061.11 ORF31581 - 0.19 11.8 11.4 0.17 12.0 1.6 2.2 1 1 1 2 2 2 0 Swi5 HIP1_clath_bdg PF16515.5 ORF31581 - 0.19 12.3 12.6 0.35 11.5 2.4 2.1 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ZapB PF06005.12 ORF31581 - 0.2 12.1 14.8 0.47 10.9 2.4 2.1 1 1 1 2 2 2 0 Cell division protein ZapB Rho_Binding PF08912.11 ORF31581 - 0.2 12.5 16.8 0.24 12.3 6.3 2.5 1 1 1 2 2 2 0 Rho Binding V-SNARE PF05008.15 ORF31581 - 0.23 11.8 11.9 0.22 11.9 4.3 2.3 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus Sec34 PF04136.15 ORF31581 - 0.23 11.3 9.7 0.41 10.5 2.0 1.9 1 1 1 2 2 2 0 Sec34-like family LPP PF04728.13 ORF31581 - 0.25 11.8 9.3 0.42 11.0 5.1 2.3 1 1 0 2 2 2 0 Lipoprotein leucine-zipper NPV_P10 PF05531.12 ORF31581 - 0.26 11.8 11.0 0.19 12.2 6.3 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein V_ATPase_I PF01496.19 ORF31581 - 0.29 9.0 6.1 0.36 8.7 6.1 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ABC_tran_CTD PF16326.5 ORF31581 - 0.34 11.2 17.2 0.63 10.3 11.9 2.6 1 1 2 3 3 3 0 ABC transporter C-terminal domain HalX PF08663.10 ORF31581 - 0.34 11.3 11.5 0.65 10.4 6.3 2.8 1 1 2 3 3 3 0 HalX domain DUF2203 PF09969.9 ORF31581 - 0.35 11.6 5.1 0.56 10.9 5.0 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) PCRF PF03462.18 ORF31581 - 0.35 10.7 7.3 0.43 10.4 7.3 1.2 1 0 0 1 1 1 0 PCRF domain DUF4337 PF14235.6 ORF31581 - 0.35 11.0 5.9 0.44 10.6 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4446 PF14584.6 ORF31581 - 0.36 10.8 8.7 1.6 8.7 0.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF4795 PF16043.5 ORF31581 - 0.42 10.2 13.6 1.1 8.9 13.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) NYD-SP28 PF14772.6 ORF31581 - 0.43 10.7 17.1 0.62 10.1 1.3 2.7 1 1 1 2 2 2 0 Sperm tail YabA PF06156.13 ORF31581 - 0.49 11.1 10.5 7.1 7.3 10.0 2.0 1 1 0 1 1 1 0 Initiation control protein YabA SseC PF04888.12 ORF31581 - 0.54 9.8 8.9 0.095 12.3 4.9 1.6 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family LMBR1 PF04791.16 ORF31581 - 0.58 9.0 2.7 0.63 8.9 2.7 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein FliD_N PF02465.18 ORF31581 - 0.67 10.7 4.3 1.9 9.2 4.3 1.8 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus XhlA PF10779.9 ORF31581 - 0.72 10.1 12.4 0.37 11.0 1.9 2.1 1 1 2 3 3 3 0 Haemolysin XhlA DPM3 PF08285.11 ORF31581 - 0.72 10.1 7.2 5.2 7.3 1.7 2.3 1 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Hemagglutinin PF00509.18 ORF31581 - 0.74 8.2 5.2 0.9 7.9 5.2 1.3 1 0 0 1 1 1 0 Haemagglutinin DUF4140 PF13600.6 ORF31581 - 0.85 10.1 10.4 2.8 8.5 1.7 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF1515 PF07439.11 ORF31581 - 0.9 9.6 2.8 4.5 7.3 2.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) APG6_N PF17675.1 ORF31581 - 0.91 10.0 19.2 2.5 8.7 19.2 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region Ax_dynein_light PF10211.9 ORF31581 - 0.92 9.4 12.8 0.61 10.0 10.7 1.6 1 1 1 2 2 2 0 Axonemal dynein light chain Prefoldin_2 PF01920.20 ORF31581 - 0.94 9.5 16.6 2.8 8.0 6.1 2.2 1 1 1 2 2 2 0 Prefoldin subunit CASP_C PF08172.12 ORF31581 - 0.98 8.7 10.2 0.18 11.1 1.0 2.1 1 1 1 2 2 2 0 CASP C terminal FAM76 PF16046.5 ORF31581 - 1 8.7 9.0 1.9 7.7 8.7 1.5 1 1 0 1 1 1 0 FAM76 protein DUF2570 PF10828.8 ORF31581 - 1.2 9.0 7.1 0.35 10.7 2.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) DASH_Dam1 PF08653.10 ORF31581 - 1.3 8.9 3.9 3 7.7 1.0 2.6 1 1 1 2 2 2 0 DASH complex subunit Dam1 Cluap1 PF10234.9 ORF31581 - 1.3 8.4 12.6 5.3 6.4 1.8 1.7 1 1 1 2 2 2 0 Clusterin-associated protein-1 SlyX PF04102.12 ORF31581 - 1.4 9.6 11.8 6 7.6 10.2 2.4 1 1 1 2 2 2 0 SlyX Wtap PF17098.5 ORF31581 - 1.5 8.8 12.1 0.4 10.6 2.0 2.1 1 1 1 2 2 2 0 WTAP/Mum2p family CHD5 PF04420.14 ORF31581 - 1.7 8.5 5.7 0.99 9.2 2.0 1.9 1 1 1 2 2 2 0 CHD5-like protein RPW8 PF05659.11 ORF31581 - 1.7 8.3 10.0 9.9 5.9 5.7 2.6 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Mst1_SARAH PF11629.8 ORF31581 - 1.8 8.7 11.7 0.5 10.5 1.0 2.6 2 1 0 2 2 2 0 C terminal SARAH domain of Mst1 Sas10_Utp3 PF04000.15 ORF31581 - 5.7 7.6 8.6 1.9e+02 2.8 8.6 2.5 1 1 0 1 1 1 0 Sas10/Utp3/C1D family ACCA PF03255.14 ORF31581 - 8.5 6.2 9.8 30 4.5 9.8 1.9 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GFO_IDH_MocA_C PF02894.17 ORF30551 - 0.14 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain DUF3950 PF13132.6 ORF30551 - 0.16 11.8 1.5 0.38 10.5 1.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) TNFR_c6 PF00020.18 ORF302 - 0.0066 16.8 1.9 0.012 16.0 1.9 1.4 1 0 0 1 1 1 1 TNFR/NGFR cysteine-rich region Katanin_con80 PF13925.6 ORF29135 - 5.9e-15 55.6 0.0 6.5e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 con80 domain of Katanin DUF4096 PF13340.6 ORF28853 - 0.024 14.8 1.2 0.15 12.3 1.1 2.0 1 1 1 2 2 2 0 Putative transposase of IS4/5 family (DUF4096) Ribosomal_L7Ae PF01248.26 ORF284 - 1.1e-22 79.6 0.1 1.2e-22 79.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Aa_trans PF01490.18 ORF28371 - 9.7e-22 77.2 5.7 1e-21 77.1 5.7 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein FAST_1 PF06743.15 ORF28371 - 0.0088 16.0 0.6 0.02 14.8 0.5 1.7 1 1 1 2 2 2 1 FAST kinase-like protein, subdomain 1 DUF202 PF02656.15 ORF28371 - 0.09 13.2 0.2 0.17 12.3 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF202) FAM72 PF14976.6 ORF28268 - 0.13 12.4 0.9 0.18 11.9 0.9 1.2 1 0 0 1 1 1 0 FAM72 protein ComC PF03047.14 ORF27956 - 0.055 13.3 0.1 0.087 12.6 0.1 1.4 1 0 0 1 1 1 0 COMC family Ery_res_leader2 PF08057.11 ORF27956 - 0.18 12.3 0.5 0.73 10.5 0.1 2.3 2 0 0 2 2 2 0 Erythromycin resistance leader peptide COP23 PF14218.6 ORF27945 - 0.0086 15.8 0.4 0.011 15.5 0.1 1.5 2 0 0 2 2 2 1 Circadian oscillating protein COP23 Pkinase PF00069.25 ORF24992 - 0.00018 21.0 0.4 0.00038 19.9 0.1 1.6 1 1 0 1 1 1 1 Protein kinase domain ABC1 PF03109.16 ORF24992 - 0.014 15.6 0.0 0.022 14.9 0.0 1.4 1 0 0 1 1 1 0 ABC1 family Epimerase PF01370.21 ORF24791 - 0.014 14.8 0.6 0.023 14.2 0.6 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family zf-RING_5 PF14634.6 ORF24351 - 0.14 12.2 1.4 0.23 11.4 1.4 1.4 1 0 0 1 1 1 0 zinc-RING finger domain ADH_N PF08240.12 ORF23982 - 4.5e-07 29.7 0.0 6e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 ORF23982 - 0.016 15.1 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase HIP1_clath_bdg PF16515.5 ORF22906 - 0.0077 16.8 4.7 0.01 16.4 4.7 1.2 1 0 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 Golgin_A5 PF09787.9 ORF22906 - 0.0081 15.7 5.6 0.0086 15.6 5.6 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 DUF641 PF04859.12 ORF22906 - 0.0082 16.5 5.1 0.0099 16.2 4.7 1.3 1 1 0 1 1 1 1 Plant protein of unknown function (DUF641) NYD-SP28 PF14772.6 ORF22906 - 0.009 16.1 6.3 0.012 15.6 6.0 1.4 1 1 0 1 1 1 1 Sperm tail Spc7 PF08317.11 ORF22906 - 0.011 14.7 5.9 0.012 14.6 5.9 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF22906 - 0.017 15.4 3.4 0.023 14.9 3.4 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 SKA2 PF16740.5 ORF22906 - 0.019 14.8 5.0 0.037 13.8 5.0 1.5 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 OmpH PF03938.14 ORF22906 - 0.021 15.2 7.7 0.021 15.2 7.7 1.3 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Viral_P18 PF04521.13 ORF22906 - 0.051 13.4 1.4 0.074 12.8 1.4 1.2 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein DUF724 PF05266.14 ORF22906 - 0.052 13.4 5.8 0.065 13.1 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF4407 PF14362.6 ORF22906 - 0.13 11.6 2.4 0.13 11.5 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Uso1_p115_C PF04871.13 ORF22906 - 0.15 12.4 8.6 0.2 12.1 8.6 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF1664 PF07889.12 ORF22906 - 0.17 12.0 3.9 0.23 11.5 3.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) BST2 PF16716.5 ORF22906 - 0.27 11.8 8.1 0.51 10.9 7.9 1.6 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 YlqD PF11068.8 ORF22906 - 0.43 11.0 7.7 0.49 10.8 7.7 1.2 1 0 0 1 1 1 0 YlqD protein bZIP_1 PF00170.21 ORF22906 - 1.3 9.2 11.5 5 7.3 4.4 2.2 1 1 1 2 2 2 0 bZIP transcription factor TMF_DNA_bd PF12329.8 ORF22906 - 1.8 8.6 12.7 6.2 6.9 12.7 1.8 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding XhlA PF10779.9 ORF22906 - 7.2 6.9 11.2 5 7.4 6.1 2.6 2 1 1 3 3 3 0 Haemolysin XhlA NapE PF06796.11 ORF22733 - 0.13 11.8 0.3 0.13 11.8 0.3 2.2 2 1 0 2 2 2 0 Periplasmic nitrate reductase protein NapE DUF3671 PF12420.8 ORF22733 - 0.2 11.7 7.6 0.24 11.5 7.6 1.2 1 0 0 1 1 1 0 Protein of unknown function ATP-synt_I PF03899.15 ORF22215 - 0.03 14.7 0.1 0.04 14.3 0.1 1.2 1 0 0 1 1 1 0 ATP synthase I chain Golgin_A5 PF09787.9 ORF22142 - 0.0029 17.1 8.5 0.003 17.1 8.5 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 DDE_Tnp_1 PF01609.21 ORF22142 - 0.033 13.8 0.2 0.041 13.5 0.2 1.0 1 0 0 1 1 1 0 Transposase DDE domain ARA70 PF12489.8 ORF22142 - 0.057 13.6 3.0 0.064 13.4 3.0 1.2 1 0 0 1 1 1 0 Nuclear coactivator DUF148 PF02520.17 ORF22142 - 0.066 13.3 4.1 0.095 12.8 4.1 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF148 PhoU PF01895.19 ORF22142 - 0.11 13.0 2.5 0.34 11.4 2.5 2.0 1 1 0 1 1 1 0 PhoU domain Phage_Mu_Gam PF07352.12 ORF22142 - 0.14 12.1 7.5 1.2 9.1 0.8 2.0 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein IF-2B PF01008.17 ORF22142 - 0.27 10.4 1.8 0.3 10.3 1.8 1.1 1 0 0 1 1 1 0 Initiation factor 2 subunit family FapA PF03961.13 ORF22142 - 0.92 8.0 7.6 1 7.9 7.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Peptidase_M54 PF07998.11 ORF21736 - 0.00016 21.8 0.2 0.00022 21.3 0.2 1.3 1 1 0 1 1 1 1 Peptidase family M54 Reprolysin_3 PF13582.6 ORF21736 - 0.0027 18.2 0.0 0.0028 18.2 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_4 PF13583.6 ORF21736 - 0.0098 15.5 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.6 ORF21736 - 0.014 15.6 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 Metallopep PF12044.8 ORF21736 - 0.029 13.0 1.3 0.064 11.9 1.4 1.5 2 0 0 2 2 2 0 Putative peptidase family Peptidase_M10 PF00413.24 ORF21736 - 0.049 13.5 0.0 0.049 13.5 0.0 1.2 1 0 0 1 1 1 0 Matrixin Reprolysin_2 PF13574.6 ORF21736 - 0.067 13.1 0.1 0.07 13.0 0.1 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.8 ORF21736 - 1.1 8.8 2.4 1.7 8.2 2.4 1.2 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase adh_short_C2 PF13561.6 ORF20520 - 8.3e-14 51.7 0.1 8.8e-14 51.6 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF20520 - 0.00056 19.4 0.1 0.00071 19.1 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Pkinase PF00069.25 ORF19590 - 9.1e-08 31.8 0.3 4.2e-05 23.0 0.0 2.1 1 1 1 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF19590 - 0.053 12.8 0.1 0.065 12.5 0.1 1.4 1 1 0 1 1 1 0 Protein tyrosine kinase TBCA PF02970.16 ORF1889 - 5.5e-23 81.1 10.4 6.6e-23 80.8 10.4 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A DUF4298 PF14131.6 ORF1889 - 0.0037 17.2 4.2 0.065 13.2 0.2 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4298) Coagulase PF08764.10 ORF1889 - 0.0049 17.1 6.7 0.005 17.1 6.7 1.0 1 0 0 1 1 1 1 Staphylococcus aureus coagulase DHR10 PF18595.1 ORF1889 - 0.008 16.2 8.8 0.029 14.4 8.8 1.7 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain COG7 PF10191.9 ORF1889 - 0.0091 14.3 0.7 0.01 14.1 0.7 1.0 1 0 0 1 1 1 1 Golgi complex component 7 (COG7) NPV_P10 PF05531.12 ORF1889 - 0.018 15.5 2.0 0.027 14.9 1.7 1.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein HMA PF00403.26 ORF1889 - 0.021 15.2 2.8 0.41 11.1 0.0 2.5 2 1 0 2 2 2 0 Heavy-metal-associated domain Sec34 PF04136.15 ORF1889 - 0.039 13.8 2.7 0.055 13.4 2.7 1.3 1 0 0 1 1 1 0 Sec34-like family BLOC1_2 PF10046.9 ORF1889 - 0.043 14.1 6.4 0.049 13.9 5.6 1.5 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Peptidase_C34 PF05413.11 ORF1889 - 0.06 13.6 0.2 0.11 12.7 0.1 1.5 1 1 1 2 2 2 0 Putative closterovirus papain-like endopeptidase Carboxyl_trans PF01039.22 ORF1889 - 0.063 11.9 0.2 0.067 11.8 0.2 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain DivIC PF04977.15 ORF1889 - 0.074 12.8 3.7 0.66 9.8 0.8 2.2 1 1 1 2 2 2 0 Septum formation initiator FapA PF03961.13 ORF1889 - 0.078 11.6 7.4 0.081 11.5 7.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A eIF-4B PF06273.11 ORF1889 - 0.09 11.8 6.7 0.1 11.6 6.7 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B APG6_N PF17675.1 ORF1889 - 0.24 12.0 11.2 0.3 11.6 11.2 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF1889 - 0.27 11.7 9.8 3.2 8.3 4.4 2.2 1 1 1 2 2 2 0 Cell division protein ZapB MapZ_EC1 PF18041.1 ORF1889 - 0.42 10.8 7.4 0.72 10.1 3.7 2.0 2 0 0 2 2 2 0 MapZ extracellular domain 1 Nup88 PF10168.9 ORF1889 - 0.47 8.2 6.6 0.49 8.2 6.6 1.0 1 0 0 1 1 1 0 Nuclear pore component PCRF PF03462.18 ORF1889 - 0.5 10.2 5.8 0.64 9.9 5.8 1.3 1 0 0 1 1 1 0 PCRF domain TMPIT PF07851.13 ORF1889 - 0.83 8.8 3.8 0.91 8.7 3.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein bZIP_1 PF00170.21 ORF1889 - 1.8 8.7 7.9 1 9.5 5.0 1.9 1 1 1 2 2 2 0 bZIP transcription factor DUF2681 PF10883.8 ORF17339 - 0.0015 18.9 1.1 0.0018 18.6 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2681) Dynamitin PF04912.14 ORF17339 - 0.012 15.0 5.2 0.013 14.9 5.2 1.0 1 0 0 1 1 1 0 Dynamitin Nterm_IS4 PF13006.7 ORF17339 - 0.024 14.8 0.6 0.036 14.2 0.6 1.3 1 0 0 1 1 1 0 Insertion element 4 transposase N-terminal PsbX PF06596.11 ORF17339 - 0.037 14.0 0.6 0.055 13.5 0.6 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre X protein (PsbX) PemK_toxin PF02452.17 ORF17339 - 0.071 13.5 0.5 0.094 13.1 0.5 1.1 1 0 0 1 1 1 0 PemK-like, MazF-like toxin of type II toxin-antitoxin system DUF5320 PF17253.2 ORF17339 - 0.21 12.7 0.8 0.28 12.3 0.3 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5320) DivIC PF04977.15 ORF17339 - 1 9.1 10.7 1.6 8.6 6.9 2.1 1 1 1 2 2 2 0 Septum formation initiator S10_plectin PF03501.15 ORF17227 - 5.6e-31 106.5 1.1 6.5e-31 106.3 1.1 1.0 1 0 0 1 1 1 1 Plectin/S10 domain VAD1-2 PF15310.6 ORF16165 - 0.099 12.5 0.3 0.12 12.2 0.3 1.1 1 0 0 1 1 1 0 Vitamin A-deficiency (VAD) rat model signalling PAP2 PF01569.21 ORF15803 - 2e-07 30.9 5.2 2.4e-07 30.6 5.2 1.1 1 0 0 1 1 1 1 PAP2 superfamily DUF2953 PF11167.8 ORF15803 - 0.34 11.0 6.4 9.4 6.4 2.0 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2953) DUF3546 PF12066.8 ORF14917 - 0.0081 16.3 0.3 0.012 15.8 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3546) DUF4661 PF15576.6 ORF14768 - 0.43 10.4 6.5 0.51 10.2 6.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) Ureide_permease PF07168.11 ORF14768 - 0.59 8.8 5.1 0.66 8.7 5.1 1.0 1 0 0 1 1 1 0 Ureide permease FYVE PF01363.21 ORF1457 - 0.032 14.4 2.7 0.043 14.0 2.7 1.5 1 1 0 1 1 1 0 FYVE zinc finger zf-C3HC4_2 PF13923.6 ORF1457 - 0.053 13.4 4.0 0.1 12.4 4.0 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 ORF1457 - 0.081 12.8 4.4 0.15 12.0 4.4 1.5 1 0 0 1 1 1 0 PHD-finger zf-C3HC4 PF00097.25 ORF1457 - 0.14 12.1 3.3 0.27 11.1 3.3 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF1457 - 0.25 11.5 6.7 2.6 8.3 3.7 2.7 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING IBR PF01485.21 ORF1457 - 0.44 10.8 4.4 0.75 10.1 3.8 1.7 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain Ribosomal_L32p PF01783.23 ORF1457 - 0.8 10.0 2.8 2.1 8.6 0.6 2.1 1 1 1 2 2 2 0 Ribosomal L32p protein family DUF4394 PF14339.6 ORF14548 - 0.036 13.4 0.1 0.037 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) DUF2057 PF09829.9 ORF14026 - 0.037 14.2 0.3 0.04 14.1 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) E1_4HB PF16191.5 ORF13510 - 0.086 13.1 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle Cg6151-P PF10233.9 ORF13392 - 0.026 14.9 0.3 0.033 14.5 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein CG6151-P RRM_1 PF00076.22 ORF13146 - 1.4e-05 24.8 0.0 2.2e-05 24.2 0.0 1.4 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyco_hydro_2_C PF02836.17 ORF12588 - 0.02 14.0 0.3 0.034 13.3 0.2 1.4 1 1 1 2 2 2 0 Glycosyl hydrolases family 2, TIM barrel domain CholecysA-Rec_N PF09193.10 ORF12496 - 0.14 12.2 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Cholecystokinin A receptor, N-terminal DUF2681 PF10883.8 ORF12034 - 0.0015 18.9 1.1 0.0018 18.6 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2681) Dynamitin PF04912.14 ORF12034 - 0.012 15.0 5.2 0.013 14.9 5.2 1.0 1 0 0 1 1 1 0 Dynamitin Nterm_IS4 PF13006.7 ORF12034 - 0.024 14.8 0.6 0.036 14.2 0.6 1.3 1 0 0 1 1 1 0 Insertion element 4 transposase N-terminal PsbX PF06596.11 ORF12034 - 0.037 14.0 0.6 0.055 13.5 0.6 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre X protein (PsbX) PemK_toxin PF02452.17 ORF12034 - 0.071 13.5 0.5 0.094 13.1 0.5 1.1 1 0 0 1 1 1 0 PemK-like, MazF-like toxin of type II toxin-antitoxin system DUF5320 PF17253.2 ORF12034 - 0.21 12.7 0.8 0.28 12.3 0.3 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5320) DivIC PF04977.15 ORF12034 - 1 9.1 10.7 1.6 8.6 6.9 2.1 1 1 1 2 2 2 0 Septum formation initiator FA_hydroxylase PF04116.13 ORF11529 - 0.00036 20.9 9.8 0.00041 20.7 9.8 1.1 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily SPAN-X PF07458.12 ORF11258 - 0.085 13.3 1.5 0.18 12.3 1.5 1.6 1 1 0 1 1 1 0 Sperm protein associated with nucleus, mapped to X chromosome UPF0300 PF08594.10 ORF112496 - 0.011 15.0 0.1 0.013 14.8 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) DUF4394 PF14339.6 ORF110953 - 0.036 13.4 0.1 0.037 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) DUF3304 PF11745.8 ORF110373 - 0.48 10.9 1.3 0.87 10.0 1.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3304) Ank_2 PF12796.7 ORF110080 - 5.8e-22 78.1 0.4 1.9e-15 57.2 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF110080 - 1.3e-21 76.0 1.1 3.7e-06 27.2 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF110080 - 2.6e-19 69.3 3.2 1.9e-08 34.7 0.1 2.4 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF110080 - 4.1e-16 57.4 0.3 0.00025 21.2 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF110080 - 2.5e-15 56.4 1.2 2.3e-05 24.6 0.1 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) DUF3251 PF11622.8 ORF110080 - 0.18 11.5 0.0 1.7 8.2 0.0 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF3251) Nse4-Nse3_bdg PF15412.6 ORF110080 - 1 9.5 4.8 1.5 9.0 0.1 2.7 3 0 0 3 3 3 0 Binding domain of Nse4/EID3 to Nse3-MAGE TPR_2 PF07719.17 ORF109796 - 0.008 16.2 0.2 0.016 15.3 0.2 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF109796 - 0.0086 15.9 0.2 0.018 14.8 0.2 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat NADH-G_4Fe-4S_3 PF10588.9 ORF108003 - 9.4e-18 63.5 0.1 9.4e-18 63.5 0.1 1.6 2 0 0 2 2 2 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer2_4 PF13510.6 ORF108003 - 0.00061 19.8 0.3 0.001 19.1 0.3 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain MAM PF00629.23 ORF106977 - 7e-06 26.1 0.0 7.5e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 MAM domain, meprin/A5/mu PUB PF09409.10 ORF106361 - 0.00011 22.1 0.1 0.00018 21.4 0.1 1.4 1 1 0 1 1 1 1 PUB domain YmgB PF10798.8 ORF105920 - 0.024 14.4 0.1 0.036 13.9 0.1 1.2 1 0 0 1 1 1 0 Biofilm development protein YmgB/AriR Fumerase_C PF05683.12 ORF105776 - 1.9e-45 154.7 0.0 2.1e-45 154.6 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus dsRBD2 PF17842.1 ORF105462 - 0.13 12.5 3.9 0.15 12.2 3.9 1.1 1 0 0 1 1 1 0 Double-stranded RNA binding domain 2 O-antigen_lig PF13425.6 ORF105462 - 1.8 7.3 6.4 1.9 7.2 6.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein SirA PF10747.9 ORF105462 - 2.1 8.7 7.8 2.3 8.5 7.8 1.0 1 0 0 1 1 1 0 Sporulation inhibitor of replication protein SirA Phage_tail_2 PF06199.11 ORF105348 - 0.0024 18.0 0.2 0.0038 17.3 0.2 1.3 1 0 0 1 1 1 1 Phage tail tube protein zf-H2C2_2 PF13465.6 ORF10516 - 3.8e-07 30.3 0.5 3.8e-07 30.3 0.5 3.2 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF10516 - 3.8e-07 30.2 12.6 0.00066 20.0 4.7 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF10516 - 0.00027 21.5 10.8 0.01 16.6 4.2 2.5 2 0 0 2 2 2 2 C2H2-type zinc finger GAGA PF09237.11 ORF10516 - 0.0023 17.7 1.3 0.0046 16.7 1.3 1.6 1 1 0 1 1 1 1 GAGA factor zf-C2H2_8 PF15909.5 ORF10516 - 0.0051 17.1 3.8 0.0059 16.9 3.8 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon ADH_N PF08240.12 ORF10516 - 0.021 14.7 0.2 0.025 14.5 0.2 1.2 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain zf-C2H2_6 PF13912.6 ORF10516 - 0.046 13.7 8.0 2.3 8.3 4.8 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger zf-met PF12874.7 ORF10516 - 0.45 11.0 10.1 0.69 10.4 4.7 3.1 2 1 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF10516 - 3.7 7.9 12.2 43 4.6 6.8 3.3 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding DUF423 PF04241.15 ORF104756 - 2.9e-05 24.2 0.9 6.8e-05 23.0 0.1 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF423) DUF776 PF05604.11 ORF104585 - 0.024 15.0 6.5 0.027 14.9 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF776) Baculo_LEF-2 PF03041.14 ORF104585 - 0.087 12.5 0.4 0.097 12.3 0.4 1.1 1 0 0 1 1 1 0 lef-2 BshC PF10079.9 ORF104585 - 0.13 11.0 2.4 0.12 11.0 2.4 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC AAA_13 PF13166.6 ORF104336 - 0.011 14.5 6.8 0.012 14.3 6.8 1.0 1 0 0 1 1 1 0 AAA domain DegV PF02645.16 ORF104336 - 0.029 13.7 2.2 0.033 13.5 2.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 TMCO5 PF14992.6 ORF104336 - 0.053 13.1 7.4 0.063 12.9 7.4 1.0 1 0 0 1 1 1 0 TMCO5 family RecG_N PF17190.4 ORF104336 - 0.11 13.2 1.3 0.11 13.2 1.3 2.1 1 1 1 2 2 2 0 RecG N-terminal helical domain LUC7 PF03194.15 ORF104336 - 0.15 11.7 5.8 0.38 10.4 5.8 1.7 1 1 0 1 1 1 0 LUC7 N_terminus Seryl_tRNA_N PF02403.22 ORF104336 - 0.31 11.3 10.9 5 7.4 10.9 2.0 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Katanin_con80 PF13925.6 ORF103266 - 5.9e-15 55.6 0.0 6.5e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 con80 domain of Katanin Gp-FAR-1 PF05823.12 ORF102978 - 0.016 15.6 0.2 0.02 15.3 0.2 1.3 1 1 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) COMPASS-Shg1 PF05205.12 ORF102978 - 0.032 14.9 1.4 0.16 12.7 0.6 1.9 1 1 0 1 1 1 0 COMPASS (Complex proteins associated with Set1p) component shg1 FlaC_arch PF05377.11 ORF102978 - 0.043 14.2 0.5 0.094 13.1 0.3 1.7 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) TBCC PF07986.12 ORF102426 - 0.0027 17.4 0.1 0.0042 16.8 0.1 1.3 1 0 0 1 1 1 1 Tubulin binding cofactor C GFO_IDH_MocA_C PF02894.17 ORF102365 - 0.14 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain DUF3950 PF13132.6 ORF102365 - 0.16 11.8 1.5 0.38 10.5 1.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) Asp PF00026.23 ORF102013 - 2.7e-07 30.3 0.4 3.6e-07 29.9 0.4 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF102013 - 0.00066 20.0 0.1 0.0009 19.5 0.1 1.2 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal ABC2_membrane_3 PF12698.7 ORF102013 - 0.059 12.5 1.1 0.066 12.3 1.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein PhoLip_ATPase_C PF16212.5 ORF101902 - 0.012 15.3 13.4 0.014 15.1 13.4 1.0 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Cation_ATPase_C PF00689.21 ORF101902 - 0.24 11.1 10.2 0.31 10.8 10.2 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF2070 PF09843.9 ORF101902 - 1.6 6.9 8.5 1.7 6.8 8.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF776 PF05604.11 ORF101819 - 0.024 15.0 6.5 0.027 14.9 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF776) Baculo_LEF-2 PF03041.14 ORF101819 - 0.087 12.5 0.4 0.097 12.3 0.4 1.1 1 0 0 1 1 1 0 lef-2 BshC PF10079.9 ORF101819 - 0.13 11.0 2.4 0.12 11.0 2.4 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC C8 PF08742.11 ORF100996 - 0.037 14.4 0.9 0.037 14.4 0.9 1.4 2 0 0 2 2 2 0 C8 domain DUF2634 PF10934.8 ORF100305 - 0.044 13.9 0.5 0.26 11.4 0.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2634) TPR_12 PF13424.6 ORF100210 - 0.0011 19.2 0.2 0.22 11.8 0.1 1.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF100210 - 0.032 14.1 0.9 0.18 11.8 0.0 2.4 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF100210 - 0.034 14.3 3.8 0.05 13.7 0.8 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF4810 PF16068.5 ORF100210 - 0.086 13.4 0.2 0.15 12.6 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4810) TPR_1 PF00515.28 ORF100210 - 0.19 11.6 7.0 2.6 8.0 0.0 2.8 2 1 1 3 3 3 0 Tetratricopeptide repeat InaF-motif PF15018.6 ORF100103 - 1.2 9.1 7.9 2.7 8.0 7.9 1.6 1 0 0 1 1 1 0 TRP-interacting helix YnfE PF17452.2 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.0047 17.2 6.0 0.0084 16.4 4.4 1.9 1 1 1 2 2 2 1 Uncharacterized YnfE-like Seryl_tRNA_N PF02403.22 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.03 14.5 4.7 0.043 14.0 4.7 1.3 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain HlyD_D23 PF16576.5 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.067 12.4 0.4 0.074 12.3 0.4 1.1 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Nsp1_C PF05064.13 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.08 12.8 8.2 0.44 10.4 7.9 2.0 1 1 0 1 1 1 0 Nsp1-like C-terminal region Sof1 PF04158.14 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.26 11.6 5.1 0.72 10.2 5.1 1.8 1 1 0 1 1 1 0 Sof1-like domain CCM2_C PF16545.5 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.65 10.6 5.0 7.5 7.2 0.1 2.2 1 1 1 2 2 2 0 Cerebral cavernous malformation protein, harmonin-homology LPD5 PF18799.1 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.67 10.4 6.9 0.83 10.1 6.9 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 5 FapA PF03961.13 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 1.2 7.7 6.8 1.3 7.6 6.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Spore_III_AB PF09548.10 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 1.4 9.0 8.2 5.6 7.1 8.2 1.7 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) DUF755 PF05501.11 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 8.8 6.6 11.0 3.4 8.0 6.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF755) Hist_deacetyl PF00850.19 NODE_55586_length_310_cov_1.385455_g47651_i0reverse_frame_1 - 0.17 11.4 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Histone deacetylase domain PglD_N PF17836.1 NODE_55586_length_310_cov_1.385455_g47651_i0forward_frame_1 - 0.034 14.8 0.0 0.051 14.2 0.0 1.2 1 0 0 1 1 1 0 PglD N-terminal domain DUF4730 PF15873.5 NODE_55574_length_310_cov_1.734545_g47639_i0forward_frame_1 - 0.06 13.6 0.2 0.12 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4730) BBS2_Mid PF14783.6 NODE_55556_length_310_cov_2.280000_g47621_i0reverse_frame_1 - 0.21 11.7 0.0 10 6.2 0.0 2.0 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 2, middle region Squash PF00299.18 NODE_55556_length_310_cov_2.280000_g47621_i0forward_frame_1 - 0.56 10.3 2.0 26 4.9 0.1 2.2 2 0 0 2 2 2 0 Squash family serine protease inhibitor Peptidase_M16 PF00675.20 NODE_55550_length_310_cov_2.450909_g47615_i0reverse_frame_1 - 2.1e-11 44.0 0.1 2.8e-11 43.6 0.1 1.2 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) BH4 PF02180.17 NODE_55549_length_310_cov_2.498182_g47614_i0reverse_frame_1 - 5.8 6.8 7.6 1.8 8.4 0.1 2.2 2 0 0 2 2 2 0 Bcl-2 homology region 4 RVT_1 PF00078.27 NODE_55544_length_310_cov_2.600000_g47609_i0forward_frame_1 - 4.7e-15 55.7 0.0 5.1e-15 55.6 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) PHTB1_N PF14727.6 NODE_55539_length_310_cov_2.854545_g47604_i0reverse_frame_1 - 0.098 12.0 0.1 0.1 12.0 0.1 1.0 1 0 0 1 1 1 0 PTHB1 N-terminus GTP_EFTU PF00009.27 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 9.3e-29 100.4 0.3 1e-28 100.2 0.3 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.00025 21.1 0.1 0.0033 17.5 0.1 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.02 14.1 0.5 0.11 11.6 0.1 1.9 1 1 0 2 2 2 0 G-protein alpha subunit AIG1 PF04548.16 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.023 14.0 0.4 0.12 11.7 0.4 1.9 1 1 0 1 1 1 0 AIG1 family Dynamin_N PF00350.23 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.04 14.0 0.1 7.5 6.6 0.1 2.1 2 0 0 2 2 2 0 Dynamin family SRPRB PF09439.10 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.052 13.0 0.2 0.53 9.7 0.2 2.2 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.14 11.7 0.0 0.66 9.5 0.0 1.9 2 0 0 2 2 2 0 Ferrous iron transport protein B ATP_bind_1 PF03029.17 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.17 11.7 0.2 4.1 7.1 0.2 2.1 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein Ribonuc_red_sm PF00268.21 NODE_55532_length_310_cov_3.636364_g47597_i0forward_frame_1 - 2.2e-13 50.3 1.0 2.2e-13 50.3 1.0 1.6 2 0 0 2 2 2 1 Ribonucleotide reductase, small chain START PF01852.19 NODE_55531_length_310_cov_3.654545_g47596_i0forward_frame_1 - 0.00011 21.7 0.0 0.00012 21.5 0.0 1.1 1 0 0 1 1 1 1 START domain Yopt PF09467.10 NODE_55531_length_310_cov_3.654545_g47596_i0forward_frame_1 - 0.083 13.0 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Hypothetical protein Yopt DUF4929 PF16283.5 NODE_55530_length_310_cov_3.658182_g47595_i0reverse_frame_1 - 0.0014 17.7 0.4 0.0017 17.4 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4929) START PF01852.19 NODE_55528_length_310_cov_4.112727_g47593_i0forward_frame_1 - 0.00011 21.7 0.0 0.00012 21.5 0.0 1.1 1 0 0 1 1 1 1 START domain Yopt PF09467.10 NODE_55528_length_310_cov_4.112727_g47593_i0forward_frame_1 - 0.081 13.0 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Hypothetical protein Yopt VEFS-Box PF09733.9 NODE_55526_length_310_cov_9.327273_g47591_i0forward_frame_1 - 3.7 7.4 10.1 1.9 8.3 8.0 1.6 1 1 1 2 2 2 0 VEFS-Box of polycomb protein PRA1 PF03208.19 NODE_55524_length_310_cov_36.934545_g47589_i0reverse_frame_1 - 0.029 14.0 11.6 0.037 13.6 11.6 1.1 1 0 0 1 1 1 0 PRA1 family protein PBP1_TM PF14812.6 NODE_55520_length_310_cov_44.556364_g47585_i0forward_frame_1 - 0.15 12.5 11.1 2 8.8 1.9 2.3 1 1 1 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal CorA PF01544.18 NODE_55515_length_310_cov_57.960000_g47580_i0reverse_frame_1 - 4.5e-13 49.2 3.1 5.4e-13 48.9 3.1 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein DUF872 PF05915.12 NODE_55512_length_310_cov_62.269091_g47577_i0reverse_frame_1 - 2.1e-12 47.2 3.3 2.7e-12 46.9 3.3 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) UPF0242 PF06785.11 NODE_55512_length_310_cov_62.269091_g47577_i0reverse_frame_1 - 0.55 10.3 2.9 0.59 10.2 2.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Torus PF16131.5 NODE_55501_length_310_cov_79.003636_g47566_i0forward_frame_1 - 0.01 16.5 5.9 0.015 16.0 5.9 1.3 1 0 0 1 1 1 0 Torus domain Glyco_trans_2_3 PF13632.6 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_1 - 1.8e-05 24.8 1.3 2e-05 24.6 1.3 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Chitin_synth_2 PF03142.15 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_1 - 0.00032 19.4 0.1 0.00033 19.4 0.1 1.1 1 0 0 1 1 1 1 Chitin synthase Cellulose_synt PF03552.14 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_1 - 0.03 12.8 0.2 0.047 12.2 0.2 1.4 1 1 1 2 2 2 0 Cellulose synthase Glyco_tranf_2_3 PF13641.6 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_1 - 0.19 11.6 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF2441 PF10386.9 NODE_55488_length_310_cov_107.094545_g47553_i0reverse_frame_1 - 0.011 15.7 0.2 0.045 13.8 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2441) Disulph_isomer PF06491.11 NODE_55483_length_310_cov_129.461818_g47548_i0forward_frame_1 - 0.035 14.2 0.0 0.039 14.0 0.0 1.1 1 0 0 1 1 1 0 Disulphide isomerase MDM31_MDM32 PF08118.11 NODE_55483_length_310_cov_129.461818_g47548_i0forward_frame_1 - 1.4 7.5 3.1 1.6 7.3 3.1 1.0 1 0 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins DUF2791 PF10923.8 NODE_55477_length_310_cov_341.963636_g47542_i0reverse_frame_1 - 0.006 15.5 0.2 0.0061 15.5 0.2 1.0 1 0 0 1 1 1 1 P-loop Domain of unknown function (DUF2791) DUF4229 PF14012.6 NODE_55477_length_310_cov_341.963636_g47542_i0forward_frame_1 - 2.6 8.2 8.5 4.4 7.5 1.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) Dishevelled PF02377.15 NODE_55475_length_310_cov_1500.527273_g47540_i0reverse_frame_1 - 0.1 13.0 5.1 0.055 13.9 3.5 1.3 1 1 0 1 1 1 0 Dishevelled specific domain EF1G PF00647.19 NODE_55473_length_311_cov_1.126812_g47538_i0forward_frame_1 - 0.13 12.3 4.1 0.17 11.9 4.1 1.2 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain DUF5079 PF16882.5 NODE_55469_length_311_cov_1.351449_g47534_i0forward_frame_1 - 0.0027 17.6 2.5 0.0032 17.4 2.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5079) Caud_tail_N PF16838.5 NODE_55469_length_311_cov_1.351449_g47534_i0forward_frame_1 - 0.014 15.8 0.1 0.019 15.4 0.1 1.1 1 0 0 1 1 1 0 Caudoviral major tail protein N-terminus Strabismus PF06638.11 NODE_55469_length_311_cov_1.351449_g47534_i0forward_frame_1 - 0.19 10.4 0.7 0.21 10.2 0.7 1.0 1 0 0 1 1 1 0 Strabismus protein RINGv PF12906.7 NODE_55461_length_311_cov_1.641304_g47526_i0forward_frame_1 - 1.6e-10 41.0 9.3 2.6e-10 40.2 9.3 1.4 1 0 0 1 1 1 1 RING-variant domain zf-RING_2 PF13639.6 NODE_55461_length_311_cov_1.641304_g47526_i0forward_frame_1 - 0.012 16.0 7.9 0.037 14.4 8.1 1.7 1 1 1 2 2 2 0 Ring finger domain zf-rbx1 PF12678.7 NODE_55461_length_311_cov_1.641304_g47526_i0forward_frame_1 - 0.21 11.9 7.8 4.2 7.8 3.9 2.4 2 1 0 2 2 2 0 RING-H2 zinc finger domain Cadherin_2 PF08266.12 NODE_55459_length_311_cov_1.847826_g47524_i0reverse_frame_1 - 0.092 12.6 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Cadherin-like DUF3704 PF12488.8 NODE_55459_length_311_cov_1.847826_g47524_i0forward_frame_1 - 0.022 14.4 0.3 0.047 13.3 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3704) FG-GAP PF01839.23 NODE_55457_length_311_cov_1.876812_g47522_i0forward_frame_1 - 0.00013 22.0 0.1 0.00051 20.1 0.3 1.7 2 0 0 2 2 2 1 FG-GAP repeat VCBS PF13517.6 NODE_55457_length_311_cov_1.876812_g47522_i0forward_frame_1 - 0.0093 16.5 0.0 0.012 16.2 0.0 1.3 1 0 0 1 1 1 1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella zf-C2HE PF16278.5 NODE_55449_length_311_cov_2.010870_g47514_i0forward_frame_1 - 0.2 12.1 1.5 0.51 10.8 0.2 2.0 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Rep_fac_C PF08542.11 NODE_55448_length_311_cov_2.032609_g47513_i0reverse_frame_1 - 0.008 16.6 0.3 0.012 16.0 0.2 1.3 1 1 0 1 1 1 1 Replication factor C C-terminal domain DNA_pol3_finger PF17657.1 NODE_55439_length_311_cov_2.297101_g47504_i0reverse_frame_1 - 0.015 14.6 0.0 0.021 14.2 0.0 1.3 1 1 0 1 1 1 0 Bacterial DNA polymerase III alpha subunit finger domain DUF520 PF04461.13 NODE_55436_length_311_cov_2.333333_g47501_i0forward_frame_1 - 9.4e-05 22.6 0.0 0.00012 22.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF520) ERAP1_C PF11838.8 NODE_55431_length_311_cov_2.576087_g47496_i0forward_frame_1 - 0.021 14.4 0.1 0.024 14.2 0.1 1.0 1 0 0 1 1 1 0 ERAP1-like C-terminal domain Telomere_res PF16684.5 NODE_55425_length_311_cov_2.923913_g47490_i0reverse_frame_1 - 0.033 13.7 0.0 0.037 13.5 0.0 1.0 1 0 0 1 1 1 0 Telomere resolvase Metallophos PF00149.28 NODE_55425_length_311_cov_2.923913_g47490_i0forward_frame_1 - 0.06 13.8 0.0 0.07 13.6 0.0 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase Gastrin PF00918.17 NODE_55414_length_311_cov_46.130435_g47479_i0reverse_frame_1 - 0.022 15.7 3.0 0.026 15.5 3.0 1.1 1 0 0 1 1 1 0 Gastrin/cholecystokinin family TMV_coat PF00721.21 NODE_55414_length_311_cov_46.130435_g47479_i0reverse_frame_1 - 0.11 12.3 3.3 0.13 12.1 3.3 1.2 1 0 0 1 1 1 0 Virus coat protein (TMV like) AMP-binding_C_2 PF14535.6 NODE_55411_length_311_cov_52.369565_g47476_i0forward_frame_1 - 0.0071 16.6 0.9 0.0094 16.2 0.9 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain R3H PF01424.22 NODE_55404_length_311_cov_70.438406_g47469_i0reverse_frame_1 - 0.074 13.1 0.1 5.1 7.2 0.0 2.3 2 0 0 2 2 2 0 R3H domain Pheromone PF08015.11 NODE_55401_length_311_cov_73.956522_g47466_i0forward_frame_1 - 1.3 10.1 7.5 2.1 9.5 7.5 1.5 1 1 0 1 1 1 0 Fungal mating-type pheromone DUF5592 PF17332.2 NODE_55390_length_311_cov_95.231884_g47455_i0forward_frame_1 - 0.035 14.6 1.3 0.035 14.6 1.3 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5592) Med19 PF10278.9 NODE_55385_length_311_cov_112.039855_g47450_i0reverse_frame_1 - 0.014 15.3 0.6 0.019 14.9 0.6 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 LSM PF01423.22 NODE_55382_length_311_cov_140.373188_g47447_i0reverse_frame_1 - 3.4e-16 58.7 1.1 5.1e-16 58.1 1.1 1.3 1 0 0 1 1 1 1 LSM domain DUF3932 PF13068.6 NODE_55370_length_311_cov_2048.931159_g47435_i0reverse_frame_1 - 0.12 12.6 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3932) Rrn6 PF10214.9 NODE_55370_length_311_cov_2048.931159_g47435_i0reverse_frame_1 - 0.73 8.3 7.0 0.84 8.1 7.0 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Adipogenin PF15202.6 NODE_55369_length_311_cov_2211.036232_g47434_i0reverse_frame_1 - 0.35 10.9 3.8 0.55 10.3 3.6 1.6 1 1 0 1 1 1 0 Adipogenin DUF3921 PF13060.6 NODE_55368_length_311_cov_2305.735507_g47433_i0reverse_frame_1 - 0.13 12.4 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3921) PG_binding_1 PF01471.18 NODE_55367_length_311_cov_5216.112319_g47432_i0forward_frame_1 - 0.15 12.3 0.0 0.26 11.5 0.0 1.3 1 0 0 1 1 1 0 Putative peptidoglycan binding domain Glyco_hydr_30_2 PF14587.6 NODE_55355_length_312_cov_1.472924_g47420_i0forward_frame_1 - 0.05 13.2 0.3 0.052 13.2 0.3 1.0 1 0 0 1 1 1 0 O-Glycosyl hydrolase family 30 RabGAP-TBC PF00566.18 NODE_55353_length_312_cov_1.559567_g47418_i0reverse_frame_1 - 2.1e-11 43.9 3.3 2.6e-11 43.6 3.3 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks226.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks226.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks226.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks226.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:57:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SUKH_6 PF14568.6 NODE_55337_length_312_cov_1.989170_g47402_i0reverse_frame_1 - 0.071 13.5 0.3 0.099 13.1 0.3 1.3 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall DUF4173 PF13777.6 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_1 - 0.037 13.4 0.4 0.083 12.3 0.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4173) COX_ARM PF06481.14 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_1 - 0.049 13.5 0.0 2.2 8.3 0.0 2.3 2 0 0 2 2 2 0 COX Aromatic Rich Motif CD47 PF04549.14 NODE_55330_length_312_cov_2.267148_g47395_i0forward_frame_1 - 0.71 10.1 8.0 1.5 9.0 2.5 2.1 2 0 0 2 2 2 0 CD47 transmembrane region Baculo_p24 PF05073.12 NODE_55330_length_312_cov_2.267148_g47395_i0forward_frame_1 - 1.8 8.3 5.3 2.2 8.1 5.3 1.3 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Viral_DNA_bp PF00747.17 NODE_55320_length_312_cov_3.277978_g47385_i0forward_frame_1 - 0.033 11.4 0.2 0.039 11.1 0.2 1.0 1 0 0 1 1 1 0 ssDNA binding protein Pkr1 PF08636.10 NODE_55318_length_312_cov_3.527076_g47383_i0reverse_frame_1 - 0.069 13.3 3.2 0.23 11.6 0.1 2.1 1 1 1 2 2 2 0 ER protein Pkr1 Peptidase_S64 PF08192.11 NODE_55312_length_312_cov_11.823105_g47377_i0forward_frame_1 - 9.4 4.6 15.8 11 4.4 15.8 1.0 1 0 0 1 1 1 0 Peptidase family S64 DUF3488 PF11992.8 NODE_55311_length_312_cov_18.963899_g47376_i0forward_frame_1 - 2.3 7.1 10.0 2.9 6.8 10.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF3772 PF12607.8 NODE_55306_length_312_cov_57.718412_g47371_i0reverse_frame_1 - 0.12 12.1 5.7 0.075 12.8 3.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3772) zf-U1 PF06220.12 NODE_55303_length_312_cov_62.696751_g47368_i0forward_frame_1 - 0.0042 16.8 0.4 0.0079 15.9 0.4 1.4 1 0 0 1 1 1 1 U1 zinc finger CEBP_ZZ PF16366.5 NODE_55303_length_312_cov_62.696751_g47368_i0forward_frame_1 - 0.039 14.2 0.6 0.058 13.6 0.6 1.3 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Keratin_B2_2 PF13885.6 NODE_55294_length_312_cov_83.418773_g47359_i0reverse_frame_1 - 0.1 12.6 11.7 0.3 11.1 11.7 1.8 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein DUF179 PF02622.15 NODE_55291_length_312_cov_101.375451_g47356_i0reverse_frame_1 - 0.00013 22.0 0.0 0.00016 21.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 RAMP4 PF06624.12 NODE_55289_length_312_cov_103.725632_g47354_i0reverse_frame_1 - 0.091 12.8 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 YqgF PF14639.6 NODE_55287_length_312_cov_107.101083_g47352_i0forward_frame_1 - 0.093 12.5 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Holliday-junction resolvase-like of SPT6 APA3_viroporin PF11289.8 NODE_55285_length_312_cov_115.187726_g47350_i0reverse_frame_1 - 0.64 9.5 2.8 0.47 10.0 1.8 1.2 1 1 0 1 1 1 0 Coronavirus accessory protein 3a DUF4200 PF13863.6 NODE_55285_length_312_cov_115.187726_g47350_i0forward_frame_1 - 5.2e-11 43.0 4.2 5.2e-11 43.0 4.2 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4200) DUF1515 PF07439.11 NODE_55285_length_312_cov_115.187726_g47350_i0forward_frame_1 - 0.017 15.2 1.6 0.024 14.6 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) DUF932 PF06067.11 NODE_55285_length_312_cov_115.187726_g47350_i0forward_frame_1 - 0.12 12.1 5.3 0.14 11.9 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF932) V_ATPase_I PF01496.19 NODE_55285_length_312_cov_115.187726_g47350_i0forward_frame_1 - 1.9 6.3 9.2 2 6.2 9.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Phenol_monoox PF04663.12 NODE_55283_length_312_cov_129.501805_g47348_i0forward_frame_1 - 0.14 12.3 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Phenol hydroxylase conserved region S1FA PF04689.13 NODE_55276_length_312_cov_226.162455_g47341_i0reverse_frame_1 - 0.011 15.8 0.7 0.011 15.8 0.7 1.5 2 0 0 2 2 2 0 DNA binding protein S1FA Orn_DAP_Arg_deC PF00278.22 NODE_55276_length_312_cov_226.162455_g47341_i0reverse_frame_1 - 0.049 13.9 0.1 0.066 13.4 0.1 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DUF2791 PF10923.8 NODE_55272_length_312_cov_339.566787_g47337_i0forward_frame_1 - 0.0096 14.8 0.1 0.0098 14.8 0.1 1.1 1 0 0 1 1 1 1 P-loop Domain of unknown function (DUF2791) MscL PF01741.18 NODE_55263_length_313_cov_1.535971_g47329_i0reverse_frame_3 - 0.0051 17.1 0.8 0.0065 16.8 0.8 1.2 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL DUF3566 PF12089.8 NODE_55263_length_313_cov_1.535971_g47329_i0reverse_frame_3 - 0.019 15.3 0.6 0.02 15.2 0.1 1.3 2 0 0 2 2 2 0 Transmembrane domain of unknown function (DUF3566) YqgB PF11036.8 NODE_55263_length_313_cov_1.535971_g47329_i0reverse_frame_3 - 0.12 12.1 0.2 6.4 6.6 0.2 2.2 2 0 0 2 2 2 0 Virulence promoting factor Herpes_UL43 PF05072.13 NODE_55252_length_313_cov_1.924460_g47318_i0reverse_frame_3 - 0.0082 15.3 2.7 0.01 15.0 2.7 1.0 1 0 0 1 1 1 1 Herpesvirus UL43 protein 7TM_GPCR_Srab PF10292.9 NODE_55251_length_313_cov_1.949640_g47317_i0reverse_frame_2 - 0.0037 16.2 1.1 0.0039 16.1 1.1 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR receptor class ab chemoreceptor Ephrin_rec_like PF07699.13 NODE_55248_length_313_cov_2.050360_g47314_i0forward_frame_2 - 0.011 15.5 0.1 0.026 14.3 0.1 1.6 1 0 0 1 1 1 0 Putative ephrin-receptor like DUF4762 PF15959.5 NODE_55248_length_313_cov_2.050360_g47314_i0forward_frame_2 - 0.63 10.1 6.0 1.6 8.7 1.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4762) HTH_18 PF12833.7 NODE_55243_length_313_cov_2.165468_g47309_i0reverse_frame_3 - 1.2e-06 28.7 0.0 1.6e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain YdiH PF15930.5 NODE_55243_length_313_cov_2.165468_g47309_i0reverse_frame_3 - 0.017 15.3 0.0 0.025 14.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function LRR_3 PF07725.12 NODE_55241_length_313_cov_2.208633_g47307_i0forward_frame_3 - 0.088 12.7 0.1 0.19 11.6 0.1 1.6 1 0 0 1 1 1 0 Leucine Rich Repeat PRD PF00874.20 NODE_55241_length_313_cov_2.208633_g47307_i0forward_frame_2 - 0.059 13.7 1.0 0.094 13.0 1.0 1.3 1 0 0 1 1 1 0 PRD domain XPC-binding PF09280.11 NODE_55241_length_313_cov_2.208633_g47307_i0forward_frame_2 - 0.1 12.4 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 XPC-binding domain PepSY_2 PF13670.6 NODE_55238_length_313_cov_2.262590_g47304_i0reverse_frame_2 - 0.14 12.2 0.2 0.21 11.6 0.2 1.2 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain zf-HC5HC2H_2 PF13832.6 NODE_55237_length_313_cov_2.374101_g47303_i0reverse_frame_2 - 0.0067 16.6 2.5 0.0077 16.4 2.5 1.1 1 0 0 1 1 1 1 PHD-zinc-finger like domain Sid-5 PF17204.3 NODE_55236_length_313_cov_2.377698_g47302_i0reverse_frame_2 - 0.03 14.5 1.5 0.18 12.0 2.6 1.7 2 0 0 2 2 2 0 Sid-5 family DUF2207 PF09972.9 NODE_55233_length_313_cov_2.589928_g47299_i0reverse_frame_3 - 0.29 9.8 6.1 0.35 9.6 6.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CCDC53 PF10152.9 NODE_55233_length_313_cov_2.589928_g47299_i0reverse_frame_2 - 4.1 7.8 5.3 6.2 7.2 5.3 1.3 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex DUF1180 PF06679.12 NODE_55233_length_313_cov_2.589928_g47299_i0reverse_frame_2 - 5.3 7.4 12.1 7 7.0 12.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) SpoIIP PF07454.11 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 0.64 9.4 16.3 0.84 9.0 16.3 1.3 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) DUF913 PF06025.12 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 1.2 8.1 8.5 1.2 8.1 8.5 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) NARP1 PF12569.8 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 1.5 7.7 16.7 1.6 7.5 16.7 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 FAM176 PF14851.6 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 1.9 8.1 14.4 2.4 7.8 14.4 1.1 1 0 0 1 1 1 0 FAM176 family DDHD PF02862.17 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 2.9 8.0 14.3 3.2 7.8 14.3 1.1 1 0 0 1 1 1 0 DDHD domain Ureide_permease PF07168.11 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 2.9 6.5 7.1 3.3 6.4 7.1 1.0 1 0 0 1 1 1 0 Ureide permease Band_3_cyto PF07565.13 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 3.3 7.4 14.8 3.8 7.3 14.8 1.0 1 0 0 1 1 1 0 Band 3 cytoplasmic domain Presenilin PF01080.17 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 4 6.1 21.4 4.4 6.0 21.4 1.0 1 0 0 1 1 1 0 Presenilin Spt20 PF12090.8 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 5 6.7 41.3 8.4 5.9 41.3 1.3 1 0 0 1 1 1 0 Spt20 family FAM60A PF15396.6 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 5.9 6.8 11.3 6.6 6.7 11.3 1.1 1 0 0 1 1 1 0 Protein Family FAM60A PAT1 PF09770.9 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 6.2 5.0 24.9 6.4 4.9 24.9 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 DUF4746 PF15928.5 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 6.2 6.1 15.2 6.8 6.0 15.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) SLC12 PF03522.15 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 9.4 5.1 16.7 10 5.0 16.7 1.0 1 0 0 1 1 1 0 Solute carrier family 12 TFIIA PF03153.13 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 9.4 6.1 38.9 11 5.9 38.9 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit RR_TM4-6 PF06459.12 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 9.4 6.0 18.8 10 5.8 18.8 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Connexin PF00029.19 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 9.6 5.9 13.4 11 5.7 13.4 1.1 1 0 0 1 1 1 0 Connexin PH_12 PF16457.5 NODE_55231_length_313_cov_2.737410_g47297_i0forward_frame_3 - 1.5e-05 25.5 0.0 1.9e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain Porin_8 PF16966.5 NODE_55230_length_313_cov_2.827338_g47296_i0reverse_frame_2 - 3.7e-17 62.4 0.0 4.4e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 Porin-like glycoporin RafY Porin_4 PF13609.6 NODE_55230_length_313_cov_2.827338_g47296_i0reverse_frame_2 - 0.012 15.4 0.2 0.016 15.0 0.2 1.2 1 0 0 1 1 1 0 Gram-negative porin DUF3320 PF11784.8 NODE_55226_length_313_cov_3.176259_g47292_i0forward_frame_2 - 1.3 9.0 3.6 19 5.3 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3320) GRDA PF04723.14 NODE_55224_length_313_cov_3.363309_g47290_i0reverse_frame_3 - 0.091 12.5 0.2 0.15 11.8 0.2 1.3 1 0 0 1 1 1 0 Glycine reductase complex selenoprotein A Peptidase_M50B PF13398.6 NODE_55221_length_313_cov_3.420863_g47287_i0reverse_frame_3 - 0.15 11.7 9.1 0.17 11.5 9.1 1.1 1 0 0 1 1 1 0 Peptidase M50B-like 2TM PF13239.6 NODE_55214_length_313_cov_22.543165_g47280_i0forward_frame_3 - 0.59 10.5 3.3 1.4 9.3 2.9 1.9 1 1 1 2 2 2 0 2TM domain DUF778 PF05608.12 NODE_55213_length_313_cov_33.017986_g47279_i0reverse_frame_2 - 0.026 14.9 1.2 0.027 14.9 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF778) YqfQ PF14181.6 NODE_55213_length_313_cov_33.017986_g47279_i0reverse_frame_2 - 1.4 9.0 10.5 1.8 8.7 10.5 1.1 1 0 0 1 1 1 0 YqfQ-like protein DUF3533 PF12051.8 NODE_55212_length_313_cov_42.604317_g47278_i0reverse_frame_2 - 0.0057 15.6 0.0 0.0065 15.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3533) Terpene_synth_C PF03936.16 NODE_55212_length_313_cov_42.604317_g47278_i0reverse_frame_2 - 0.039 13.3 1.2 0.05 12.9 1.2 1.1 1 0 0 1 1 1 0 Terpene synthase family, metal binding domain Lipoprotein_2 PF00921.17 NODE_55212_length_313_cov_42.604317_g47278_i0reverse_frame_2 - 0.059 12.9 0.8 0.074 12.6 0.8 1.0 1 0 0 1 1 1 0 Borrelia lipoprotein DUF3222 PF11519.8 NODE_55208_length_313_cov_58.676259_g47274_i0forward_frame_3 - 0.037 14.3 0.7 0.051 13.8 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3222) ATP_sub_h PF10775.9 NODE_55207_length_313_cov_58.694245_g47273_i0reverse_frame_2 - 0.068 13.2 0.1 0.3 11.1 0.0 1.9 1 1 1 2 2 2 0 ATP synthase complex subunit h BESS PF02944.20 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 0.015 15.1 0.3 0.031 14.1 0.3 1.6 1 0 0 1 1 1 0 BESS motif PBP_sp32 PF07222.12 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 0.18 11.2 9.2 0.2 11.1 9.2 1.0 1 0 0 1 1 1 0 Proacrosin binding protein sp32 ARD PF03079.14 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 1.4 9.1 7.5 1.6 8.9 7.5 1.0 1 0 0 1 1 1 0 ARD/ARD' family FapA PF03961.13 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 2.4 6.7 11.9 2.9 6.4 11.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Presenilin PF01080.17 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 6.3 5.4 4.9 6.8 5.3 4.9 1.0 1 0 0 1 1 1 0 Presenilin GPS PF01825.21 NODE_55198_length_313_cov_78.230216_g47264_i0reverse_frame_2 - 0.043 14.3 0.4 0.089 13.3 0.4 1.5 1 0 0 1 1 1 0 GPCR proteolysis site, GPS, motif FHA PF00498.26 NODE_55198_length_313_cov_78.230216_g47264_i0forward_frame_3 - 1.2e-11 44.7 0.0 1.5e-11 44.5 0.0 1.2 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_55198_length_313_cov_78.230216_g47264_i0forward_frame_3 - 1.4e-07 31.8 0.0 1.6e-07 31.6 0.0 1.1 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain SecD_SecF PF02355.16 NODE_55196_length_313_cov_84.913669_g47262_i0reverse_frame_3 - 0.037 13.4 0.1 0.049 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein export membrane protein BNR PF02012.20 NODE_55194_length_313_cov_94.719424_g47260_i0reverse_frame_2 - 0.073 13.1 0.3 19 5.8 0.0 2.5 2 0 0 2 2 2 0 BNR/Asp-box repeat Activin_recp PF01064.23 NODE_55182_length_313_cov_142.755396_g47248_i0forward_frame_3 - 0.053 14.6 3.5 0.066 14.3 3.5 1.1 1 0 0 1 1 1 0 Activin types I and II receptor domain TMF_TATA_bd PF12325.8 NODE_55181_length_313_cov_143.787770_g47247_i0forward_frame_2 - 0.016 15.4 6.7 0.023 14.9 6.7 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Spo7 PF03907.13 NODE_55181_length_313_cov_143.787770_g47247_i0forward_frame_2 - 0.021 14.3 3.8 0.024 14.1 3.8 1.1 1 0 0 1 1 1 0 Spo7-like protein DivIC PF04977.15 NODE_55181_length_313_cov_143.787770_g47247_i0forward_frame_2 - 1.9 8.3 10.0 6.6 6.6 8.5 2.2 1 1 0 1 1 1 0 Septum formation initiator Exonuc_VII_L PF02601.15 NODE_55181_length_313_cov_143.787770_g47247_i0forward_frame_2 - 2.9 7.4 8.6 3 7.3 8.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Abhydrolase_1 PF00561.20 NODE_55175_length_313_cov_197.651079_g47241_i0reverse_frame_2 - 0.014 15.1 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_55175_length_313_cov_197.651079_g47241_i0reverse_frame_2 - 0.053 12.8 0.0 0.063 12.5 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 FSH1 PF03959.13 NODE_55175_length_313_cov_197.651079_g47241_i0reverse_frame_2 - 0.072 12.7 0.0 0.082 12.6 0.0 1.1 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 NODE_55175_length_313_cov_197.651079_g47241_i0reverse_frame_2 - 0.12 12.5 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 TAP-like protein TetR_C_10 PF16295.5 NODE_55174_length_313_cov_202.543165_g47240_i0reverse_frame_2 - 0.0021 18.3 3.4 0.0027 18.0 3.4 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain DUF3636 PF12331.8 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_2 - 0.065 13.1 1.8 1.1 9.0 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3636) GnRH PF00446.17 NODE_55171_length_313_cov_278.902878_g47237_i0forward_frame_3 - 1.2 9.7 4.3 20 5.8 0.7 2.5 2 0 0 2 2 2 0 Gonadotropin-releasing hormone Ctr PF04145.15 NODE_55169_length_313_cov_523.841727_g47235_i0reverse_frame_3 - 0.09 13.4 0.0 0.11 13.1 0.0 1.1 1 0 0 1 1 1 0 Ctr copper transporter family DUF4834 PF16118.5 NODE_55169_length_313_cov_523.841727_g47235_i0reverse_frame_3 - 0.12 13.4 0.0 0.13 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Csa1 PF06023.12 NODE_55167_length_314_cov_0.913978_g47233_i0forward_frame_2 - 0.012 15.0 0.0 0.014 14.8 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated exonuclease Csa1 MyTH4 PF00784.17 NODE_55161_length_314_cov_1.279570_g47227_i0forward_frame_3 - 0.04 14.4 0.1 0.07 13.6 0.1 1.3 1 0 0 1 1 1 0 MyTH4 domain DUF349 PF03993.12 NODE_55161_length_314_cov_1.279570_g47227_i0forward_frame_3 - 2.9 8.2 8.0 0.93 9.8 3.6 2.5 2 1 0 2 2 2 0 Domain of Unknown Function (DUF349) VRR_NUC PF08774.11 NODE_55157_length_314_cov_1.491039_g47223_i0forward_frame_3 - 0.047 13.8 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 VRR-NUC domain pXO2-72 PF17443.2 NODE_55153_length_314_cov_1.634409_g47219_i0reverse_frame_3 - 0.11 12.7 1.1 0.12 12.7 0.2 1.5 2 0 0 2 2 2 0 Uncharacterized protein pXO2-72 Capsid-VNN PF11729.8 NODE_55152_length_314_cov_1.655914_g47218_i0reverse_frame_2 - 0.26 10.3 0.0 0.3 10.1 0.0 1.1 1 0 0 1 1 1 0 nodavirus capsid protein HTH_49 PF18010.1 NODE_55151_length_314_cov_1.684588_g47217_i0reverse_frame_3 - 0.063 13.1 0.1 0.11 12.4 0.1 1.4 1 0 0 1 1 1 0 Cry35Ab1 HTH C-terminal domain Usp PF00582.26 NODE_55144_length_314_cov_1.989247_g47210_i0reverse_frame_3 - 2.4e-15 57.3 0.3 3e-15 57.0 0.3 1.1 1 0 0 1 1 1 1 Universal stress protein family DUF3530 PF12048.8 NODE_55144_length_314_cov_1.989247_g47210_i0forward_frame_3 - 0.17 11.3 0.0 0.21 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Thx PF17070.5 NODE_55144_length_314_cov_1.989247_g47210_i0forward_frame_3 - 6.3 7.1 8.1 0.27 11.4 1.5 2.0 2 0 0 2 2 2 0 30S ribosomal protein Thx TFIID-31kDa PF02291.15 NODE_55136_length_314_cov_2.186380_g47202_i0reverse_frame_3 - 2.7e-06 27.4 0.1 3.6e-06 27.0 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit CmcI PF04989.12 NODE_55136_length_314_cov_2.186380_g47202_i0reverse_frame_3 - 0.067 12.9 0.1 0.12 12.1 0.1 1.3 1 1 0 1 1 1 0 Cephalosporin hydroxylase DUF2555 PF10742.9 NODE_55135_length_314_cov_2.344086_g47201_i0reverse_frame_3 - 0.025 14.4 0.1 0.051 13.4 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2555) DUF5544 PF17698.1 NODE_55134_length_314_cov_2.433692_g47200_i0forward_frame_2 - 0.19 11.9 3.4 0.28 11.3 2.7 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5544) Tape_meas_lam_C PF09718.10 NODE_55131_length_314_cov_2.609319_g47197_i0reverse_frame_2 - 0.066 13.3 0.0 0.091 12.9 0.0 1.2 1 0 0 1 1 1 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) Zn_ribbon_17 PF17120.5 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_3 - 0.21 11.2 2.1 0.38 10.4 2.1 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Methyltransf_30 PF05430.11 NODE_55125_length_314_cov_2.738351_g47191_i0forward_frame_3 - 0.007 16.2 0.0 0.0087 15.9 0.0 1.1 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase TypeIII_RM_meth PF12564.8 NODE_55124_length_314_cov_2.738351_g47190_i0reverse_frame_3 - 0.029 14.5 0.0 0.04 14.0 0.0 1.2 1 0 0 1 1 1 0 Type III restriction/modification enzyme methylation subunit Cys_rich_CPXG PF14255.6 NODE_55123_length_314_cov_2.777778_g47189_i0forward_frame_3 - 0.017 15.0 0.3 0.023 14.6 0.3 1.3 1 0 0 1 1 1 0 Cysteine-rich CPXCG DSPc PF00782.20 NODE_55121_length_314_cov_2.910394_g47187_i0forward_frame_3 - 3.5e-06 26.9 0.9 5e-06 26.4 0.5 1.5 1 1 1 2 2 2 1 Dual specificity phosphatase, catalytic domain Ago_PAZ PF18309.1 NODE_55121_length_314_cov_2.910394_g47187_i0forward_frame_3 - 0.076 13.7 0.1 0.1 13.3 0.1 1.4 1 1 0 1 1 1 0 Argonaute PAZ domain zf_UBZ PF18439.1 NODE_55121_length_314_cov_2.910394_g47187_i0forward_frame_2 - 2.4 7.8 6.4 0.65 9.6 1.3 2.5 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger DUF4105 PF13387.6 NODE_55120_length_314_cov_2.956989_g47186_i0forward_frame_2 - 0.089 12.4 0.3 0.13 11.9 0.3 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4105) Claudin_3 PF06653.11 NODE_55118_length_314_cov_3.236559_g47184_i0forward_frame_2 - 0.94 9.4 7.3 0.44 10.5 5.3 1.5 1 1 1 2 2 2 0 Tight junction protein, Claudin-like TetR_N PF00440.23 NODE_55115_length_314_cov_3.516129_g47181_i0reverse_frame_3 - 1.2e-15 57.0 0.1 1.6e-15 56.6 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family LacI PF00356.21 NODE_55115_length_314_cov_3.516129_g47181_i0reverse_frame_3 - 0.12 12.2 0.1 0.55 10.1 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family Ig_5 PF16681.5 NODE_55113_length_314_cov_3.691756_g47179_i0reverse_frame_3 - 0.048 14.1 0.6 0.065 13.6 0.6 1.2 1 0 0 1 1 1 0 Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain RSN1_TM PF13967.6 NODE_55113_length_314_cov_3.691756_g47179_i0forward_frame_3 - 0.085 12.6 1.2 0.11 12.3 1.2 1.2 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport Calx-beta PF03160.14 NODE_55109_length_314_cov_7.021505_g47175_i0reverse_frame_2 - 0.016 15.4 0.0 0.023 14.9 0.0 1.2 1 0 0 1 1 1 0 Calx-beta domain SCRG1 PF15224.6 NODE_55108_length_314_cov_9.681004_g47174_i0reverse_frame_3 - 0.071 13.2 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Scrapie-responsive protein 1 Oxysterol_BP PF01237.18 NODE_55103_length_314_cov_59.129032_g47169_i0forward_frame_2 - 2.9e-19 69.2 5.3 3.6e-19 68.8 5.3 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Drc1-Sld2 PF11719.8 NODE_55101_length_314_cov_63.831541_g47167_i0forward_frame_2 - 0.2 11.2 15.2 0.21 11.1 15.2 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein DUF1676 PF07898.13 NODE_55101_length_314_cov_63.831541_g47167_i0forward_frame_2 - 5.2 7.1 9.4 6.3 6.8 9.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) Ribosomal_60s PF00428.19 NODE_55099_length_314_cov_66.516129_g47165_i0reverse_frame_3 - 1.2e-12 48.2 2.1 1.5e-12 48.0 2.1 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein HD PF01966.22 NODE_55099_length_314_cov_66.516129_g47165_i0reverse_frame_3 - 0.05 13.8 0.0 0.069 13.4 0.0 1.3 1 0 0 1 1 1 0 HD domain SelK_SelG PF10961.8 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_2 - 0.066 13.8 3.4 0.088 13.4 3.4 1.1 1 0 0 1 1 1 0 Selenoprotein SelK_SelG DUF659 PF04937.15 NODE_55095_length_314_cov_70.827957_g47161_i0forward_frame_3 - 0.031 14.1 0.2 0.036 13.9 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF 659) Ycf4 PF02392.16 NODE_55094_length_314_cov_71.032258_g47160_i0reverse_frame_3 - 0.067 12.8 0.1 0.076 12.6 0.1 1.1 1 0 0 1 1 1 0 Ycf4 Corona_M PF01635.18 NODE_55094_length_314_cov_71.032258_g47160_i0forward_frame_2 - 2.9 7.1 11.9 3.6 6.8 11.9 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein Ank_2 PF12796.7 NODE_55091_length_314_cov_74.792115_g47157_i0reverse_frame_3 - 6.4e-05 23.5 0.0 0.00023 21.7 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_55091_length_314_cov_74.792115_g47157_i0reverse_frame_3 - 0.00027 21.2 0.0 0.0004 20.6 0.0 1.3 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_55091_length_314_cov_74.792115_g47157_i0reverse_frame_3 - 0.0073 16.7 0.0 0.023 15.2 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 NODE_55091_length_314_cov_74.792115_g47157_i0reverse_frame_3 - 0.018 15.5 0.1 0.056 13.9 0.1 1.8 2 0 0 2 2 2 0 Ankyrin repeat Mac-1 PF09028.10 NODE_55087_length_314_cov_84.322581_g47153_i0forward_frame_3 - 0.082 12.0 0.1 0.086 11.9 0.1 1.1 1 0 0 1 1 1 0 Mac 1 Myosin_head PF00063.21 NODE_55085_length_314_cov_86.985663_g47151_i0reverse_frame_2 - 1.7e-18 66.2 0.0 1.9e-18 66.1 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) Importin_rep_4 PF18808.1 NODE_55084_length_314_cov_93.000000_g47150_i0forward_frame_2 - 0.14 12.5 0.0 0.24 11.7 0.0 1.3 1 1 0 1 1 1 0 Importin repeat DUF5305 PF17231.2 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 0.013 14.9 0.2 0.015 14.8 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) CTV_P6 PF06706.11 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 0.054 13.2 0.3 0.091 12.5 0.3 1.3 1 0 0 1 1 1 0 Citrus tristeza virus 6-kDa protein FeoB_associated PF12669.7 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 0.06 13.8 0.4 0.091 13.2 0.4 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Baculo_11_kDa PF06143.11 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 0.066 12.8 2.9 0.1 12.2 2.9 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family DHC PF09626.10 NODE_55079_length_314_cov_122.293907_g47145_i0forward_frame_2 - 0.019 15.8 0.2 0.025 15.5 0.2 1.1 1 0 0 1 1 1 0 Dihaem cytochrome c DUF2644 PF10841.8 NODE_55076_length_314_cov_192.770609_g47142_i0reverse_frame_2 - 0.35 11.1 1.0 0.5 10.6 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) Pheromone PF08015.11 NODE_55075_length_314_cov_224.326165_g47141_i0reverse_frame_3 - 0.32 12.1 3.5 2.9 9.0 0.2 2.1 2 0 0 2 2 2 0 Fungal mating-type pheromone DUF4910 PF16254.5 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 0.0031 16.4 0.1 1.3 7.8 0.0 2.9 1 1 2 3 3 3 2 Domain of unknown function (DUF4910) DUF3953 PF13129.6 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 0.022 14.5 0.9 1.4 8.8 0.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3953) DUF4723 PF15851.5 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 0.082 13.1 1.6 4.5 7.5 0.2 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4723) DUF4024 PF13216.6 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 0.095 12.6 4.5 25 4.9 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF4024) tRNA_bind_2 PF13725.6 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 6.8 6.3 6.8 36 3.9 0.1 3.0 3 0 0 3 3 3 0 Possible tRNA binding domain Alginate_exp PF13372.6 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_3 - 0.2 10.3 0.1 4.7 5.8 0.0 2.0 2 0 0 2 2 2 0 Alginate export Ank_2 PF12796.7 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 6.7e-24 84.3 0.8 6.5e-13 49.1 0.2 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 3.5e-14 51.5 0.1 0.0017 18.7 0.0 3.5 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 8.2e-13 48.6 0.0 9.3e-07 29.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 7.6e-11 42.0 0.1 0.027 14.8 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 1.7e-09 37.7 0.0 0.11 13.0 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat DUF2170 PF09938.9 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 0.07 12.8 0.0 11 5.7 0.0 2.7 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2170) Cyclin_N PF00134.23 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 0.1 12.3 0.0 17 5.2 0.0 2.8 1 1 2 3 3 3 0 Cyclin, N-terminal domain Involucrin PF00904.17 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 9.9 7.3 6.2 70 4.7 0.4 3.2 3 0 0 3 3 3 0 Involucrin repeat Jiv90 PF14901.6 NODE_55072_length_314_cov_479.684588_g47138_i0reverse_frame_3 - 0.048 13.8 2.6 0.27 11.4 2.6 1.9 1 1 0 1 1 1 0 Cleavage inducing molecular chaperone Crust_neurohorm PF01147.17 NODE_55072_length_314_cov_479.684588_g47138_i0reverse_frame_3 - 0.075 12.9 1.4 0.16 11.8 1.4 1.5 1 1 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family zf-C5HC2 PF02928.16 NODE_55071_length_314_cov_1119.318996_g47137_i0reverse_frame_3 - 0.00021 21.6 11.2 0.00033 21.0 11.2 1.3 1 0 0 1 1 1 1 C5HC2 zinc finger zf-3CxxC PF13695.6 NODE_55066_length_315_cov_1.178571_g47132_i0reverse_frame_2 - 0.011 16.1 0.4 0.015 15.8 0.4 1.1 1 0 0 1 1 1 0 Zinc-binding domain p450 PF00067.22 NODE_55064_length_315_cov_1.353571_g47130_i0forward_frame_2 - 7.1e-25 87.7 0.1 8.6e-25 87.4 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 Urotensin_II PF02083.15 NODE_55063_length_315_cov_1.360714_g47129_i0reverse_frame_2 - 0.12 12.1 1.5 0.25 11.1 1.5 1.5 1 0 0 1 1 1 0 Urotensin II B_solenoid_dext PF18841.1 NODE_55063_length_315_cov_1.360714_g47129_i0forward_frame_3 - 0.085 13.2 0.2 0.16 12.3 0.2 1.4 1 0 0 1 1 1 0 Beta solenoid repeat from Dextranase DevR PF01905.16 NODE_55063_length_315_cov_1.360714_g47129_i0forward_frame_3 - 0.14 11.2 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 CRISPR-associated negative auto-regulator DevR/Csa2 Baculo_VP39 PF04501.12 NODE_55060_length_315_cov_1.432143_g47126_i0reverse_frame_2 - 0.13 11.7 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Baculovirus major capsid protein VP39 Csm1_N PF18504.1 NODE_55059_length_315_cov_1.450000_g47125_i0reverse_frame_2 - 0.031 14.6 0.5 0.053 13.9 0.5 1.3 1 0 0 1 1 1 0 Csm1 N-terminal domain TSC22 PF01166.18 NODE_55059_length_315_cov_1.450000_g47125_i0reverse_frame_2 - 0.032 14.5 0.4 0.07 13.5 0.4 1.7 1 0 0 1 1 1 0 TSC-22/dip/bun family CLZ PF16526.5 NODE_55059_length_315_cov_1.450000_g47125_i0reverse_frame_2 - 0.042 14.2 1.4 0.15 12.4 0.2 2.0 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Herpes_UL49_2 PF04823.12 NODE_55057_length_315_cov_1.567857_g47123_i0forward_frame_3 - 0.17 12.0 0.6 0.24 11.5 0.6 1.2 1 0 0 1 1 1 0 Herpesvirus UL49 tegument protein CcmD PF04995.14 NODE_55055_length_315_cov_1.582143_g47121_i0reverse_frame_2 - 1.2 9.3 3.3 2.5 8.3 3.3 1.6 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Prok-RING_4 PF14447.6 NODE_55053_length_315_cov_1.653571_g47119_i0forward_frame_3 - 0.035 14.0 0.9 0.056 13.3 0.1 1.7 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Actino_peptide PF14408.6 NODE_55050_length_315_cov_1.728571_g47116_i0reverse_frame_2 - 0.054 13.6 0.0 0.09 12.9 0.0 1.4 1 0 0 1 1 1 0 Ribosomally synthesised peptide in actinomycetes SHR3_chaperone PF08229.11 NODE_55050_length_315_cov_1.728571_g47116_i0reverse_frame_2 - 0.067 12.2 0.1 0.071 12.1 0.1 1.1 1 0 0 1 1 1 0 ER membrane protein SH3 CsoS2_M PF12288.8 NODE_55050_length_315_cov_1.728571_g47116_i0reverse_frame_2 - 0.86 8.9 6.8 0.96 8.8 6.8 1.0 1 0 0 1 1 1 0 Carboxysome shell peptide mid-region PUA_3 PF17785.1 NODE_55046_length_315_cov_1.835714_g47112_i0reverse_frame_3 - 3.7e-14 52.3 0.1 5.2e-14 51.8 0.1 1.2 1 0 0 1 1 1 1 PUA-like domain PUA PF01472.20 NODE_55046_length_315_cov_1.835714_g47112_i0reverse_frame_3 - 0.005 16.8 0.0 0.0072 16.3 0.0 1.2 1 0 0 1 1 1 1 PUA domain DUF3399 PF11879.8 NODE_55046_length_315_cov_1.835714_g47112_i0forward_frame_3 - 0.26 11.6 3.0 0.39 11.1 3.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) AKAP2_C PF15304.6 NODE_55045_length_315_cov_1.921429_g47111_i0forward_frame_2 - 0.046 13.0 1.5 0.05 12.9 1.5 1.0 1 0 0 1 1 1 0 A-kinase anchor protein 2 C-terminus RPOL_N PF14700.6 NODE_55039_length_315_cov_2.185714_g47105_i0forward_frame_2 - 8.3e-05 22.1 1.2 9.7e-05 21.9 1.2 1.1 1 0 0 1 1 1 1 DNA-directed RNA polymerase N-terminal DUF4919 PF16266.5 NODE_55039_length_315_cov_2.185714_g47105_i0forward_frame_2 - 0.0032 17.4 0.0 0.0035 17.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4919) BALF1 PF06861.11 NODE_55036_length_315_cov_2.307143_g47102_i0forward_frame_3 - 0.13 11.9 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 BALF1 protein DUF1445 PF07286.12 NODE_55036_length_315_cov_2.307143_g47102_i0forward_frame_2 - 0.07 13.1 0.0 0.08 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1445) Peptidase_M20 PF01546.28 NODE_55033_length_315_cov_2.325000_g47099_i0reverse_frame_3 - 4e-07 29.9 0.0 4.6e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 NODE_55033_length_315_cov_2.325000_g47099_i0reverse_frame_3 - 0.026 14.2 0.0 0.028 14.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M28 AAA_lid_2 PF17863.1 NODE_55033_length_315_cov_2.325000_g47099_i0forward_frame_2 - 0.045 13.6 0.1 0.1 12.4 0.1 1.6 1 0 0 1 1 1 0 AAA lid domain DUF4186 PF13811.6 NODE_55032_length_315_cov_2.325000_g47098_i0reverse_frame_2 - 6.2e-32 109.9 0.3 6.2e-32 109.9 0.3 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4186) zf-AD PF07776.15 NODE_55032_length_315_cov_2.325000_g47098_i0reverse_frame_2 - 0.014 15.6 0.5 0.024 14.8 0.5 1.4 1 1 0 1 1 1 0 Zinc-finger associated domain (zf-AD) DUF1244 PF06844.11 NODE_55032_length_315_cov_2.325000_g47098_i0reverse_frame_2 - 0.066 13.4 0.1 0.066 13.4 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1244) Izumo-Ig PF16706.5 NODE_55032_length_315_cov_2.325000_g47098_i0reverse_frame_2 - 0.11 12.6 0.3 0.13 12.3 0.3 1.2 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain DUF4543 PF15076.6 NODE_55029_length_315_cov_2.425000_g47095_i0forward_frame_2 - 0.13 12.5 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4543) NADH_4Fe-4S PF10589.9 NODE_55028_length_315_cov_2.432143_g47094_i0forward_frame_3 - 0.044 13.9 0.1 0.087 12.9 0.1 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PLDc_2 PF13091.6 NODE_55027_length_315_cov_2.442857_g47093_i0forward_frame_3 - 0.015 15.2 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 PLD-like domain DUF1819 PF08849.11 NODE_55025_length_315_cov_2.542857_g47091_i0reverse_frame_2 - 0.024 14.4 0.0 0.03 14.1 0.0 1.1 1 0 0 1 1 1 0 Putative inner membrane protein (DUF1819) Cortexin PF11057.8 NODE_55024_length_315_cov_2.603571_g47090_i0forward_frame_3 - 0.17 11.8 2.5 0.27 11.1 2.5 1.4 1 0 0 1 1 1 0 Cortexin of kidney Xan_ur_permease PF00860.20 NODE_55023_length_315_cov_2.625000_g47089_i0reverse_frame_3 - 4.8e-10 38.7 1.5 5.6e-10 38.5 1.5 1.1 1 0 0 1 1 1 1 Permease family PapD_C PF02753.17 NODE_55020_length_315_cov_2.942857_g47086_i0forward_frame_2 - 1.4e-05 25.3 0.1 2.1e-05 24.7 0.1 1.2 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain Imm9 PF15587.6 NODE_55018_length_315_cov_3.614286_g47084_i0reverse_frame_2 - 0.0031 17.2 2.0 0.0036 17.0 2.0 1.1 1 0 0 1 1 1 1 Immunity protein 9 YrvL PF14184.6 NODE_55015_length_315_cov_7.596429_g47081_i0reverse_frame_3 - 0.0038 17.3 0.9 0.0045 17.1 0.9 1.1 1 0 0 1 1 1 1 Regulatory protein YrvL DUF4468 PF14730.6 NODE_55014_length_315_cov_22.625000_g47080_i0reverse_frame_2 - 0.037 14.3 0.2 0.046 14.0 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold SelB-wing_1 PF09105.10 NODE_55006_length_315_cov_55.046429_g47072_i0reverse_frame_2 - 0.089 12.8 0.2 0.18 11.8 0.0 1.6 2 0 0 2 2 2 0 Elongation factor SelB, winged helix SET PF00856.28 NODE_55005_length_315_cov_56.214286_g47071_i0reverse_frame_3 - 0.00032 21.1 0.0 0.00038 20.9 0.0 1.1 1 0 0 1 1 1 1 SET domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks227.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks227.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks227.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks227.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1654 PF07867.11 NODE_55001_length_315_cov_63.421429_g47067_i0forward_frame_2 - 0.059 13.1 0.0 0.089 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1654) Sel_put PF04328.13 NODE_54996_length_315_cov_68.350000_g47062_i0forward_frame_3 - 0.04 14.0 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Selenoprotein, putative PPR_2 PF13041.6 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 4.9e-10 39.4 0.0 3.8e-07 30.2 0.0 2.5 2 1 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 5.5e-09 36.0 0.0 1.4e-06 28.3 0.0 2.1 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 4.1e-07 29.6 0.1 0.1 12.3 0.0 3.7 3 1 0 3 3 3 2 PPR repeat PPR PF01535.20 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 3.1e-06 27.1 1.8 0.089 13.1 0.0 3.3 3 1 0 3 3 3 2 PPR repeat PPR_long PF17177.4 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 0.014 14.7 0.0 0.022 14.1 0.0 1.4 1 1 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP F-box-like PF12937.7 NODE_54994_length_315_cov_73.400000_g47060_i0reverse_frame_3 - 0.73 9.8 4.8 1.2 9.1 4.8 1.4 1 0 0 1 1 1 0 F-box-like DUF3464 PF11947.8 NODE_54994_length_315_cov_73.400000_g47060_i0reverse_frame_2 - 0.012 15.4 1.1 0.02 14.6 0.0 1.7 1 1 1 2 2 2 0 Photosynthesis affected mutant 68 DUF4865 PF16157.5 NODE_54993_length_315_cov_73.503571_g47059_i0forward_frame_2 - 0.12 12.3 0.1 0.15 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4865) Toxin_34 PF08396.10 NODE_54986_length_315_cov_101.232143_g47052_i0forward_frame_3 - 3.5 8.4 8.9 3.2 8.6 1.4 2.1 1 1 1 2 2 2 0 Spider toxin omega agatoxin/Tx1 family Pro_isomerase PF00160.21 NODE_54973_length_315_cov_979.989286_g42158_i3forward_frame_3 - 0.035 14.4 0.0 0.038 14.2 0.0 1.1 1 0 0 1 1 1 0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Melittin PF01372.17 NODE_54972_length_315_cov_1813.864286_g47039_i0forward_frame_2 - 4.1 7.5 5.5 12 6.0 0.5 2.6 2 0 0 2 2 2 0 Melittin P16-Arc PF04699.14 ORF99208 - 3.6e-09 37.3 4.3 4.2e-09 37.0 4.3 1.1 1 0 0 1 1 1 1 ARP2/3 complex 16 kDa subunit (p16-Arc) CagD PF16567.5 ORF99208 - 0.017 14.9 1.0 0.018 14.9 0.5 1.4 1 1 0 1 1 1 0 Pathogenicity island component CagD Spermine_synth PF01564.17 ORF99208 - 0.054 12.9 1.7 0.053 12.9 1.7 1.1 1 0 0 1 1 1 0 Spermine/spermidine synthase domain CENP-N PF05238.13 ORF99208 - 0.09 12.1 3.3 0.094 12.0 3.3 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like EMC3_TMCO1 PF01956.16 ORF99208 - 2 8.1 4.1 2.2 8.0 4.1 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like zf-SNAP50_C PF12251.8 ORF98659 - 0.019 14.7 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 snRNA-activating protein of 50kDa MW C terminal PP2C_2 PF13672.6 ORF98229 - 0.00025 20.8 0.0 0.00028 20.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C PF00481.21 ORF98229 - 0.002 17.8 0.1 0.0021 17.7 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C CotJB PF12652.7 ORF98229 - 0.048 13.9 0.2 0.083 13.1 0.2 1.3 1 0 0 1 1 1 0 CotJB protein UBZ_FAAP20 PF15750.5 ORF98229 - 0.29 11.1 1.2 0.67 10.0 0.2 2.0 2 0 0 2 2 2 0 Ubiquitin-binding zinc-finger MORN PF02493.20 ORF97615 - 4.2e-06 26.3 15.8 7.8e-05 22.3 2.6 4.1 5 0 0 5 5 5 2 MORN repeat LMSTEN PF07988.12 ORF9734 - 0.059 12.9 0.1 0.16 11.5 0.1 1.7 1 0 0 1 1 1 0 LMSTEN motif Sec1 PF00995.23 ORF97304 - 1.8e-09 37.4 0.0 1.9e-09 37.3 0.0 1.0 1 0 0 1 1 1 1 Sec1 family DndB PF14072.6 ORF973 - 0.15 11.3 0.0 0.22 10.7 0.0 1.1 1 0 0 1 1 1 0 DNA-sulfur modification-associated EF-hand_4 PF12763.7 ORF97143 - 0.0056 16.6 0.2 0.0079 16.1 0.2 1.3 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Cutinase PF01083.22 ORF96107 - 0.025 14.6 0.0 0.027 14.4 0.0 1.1 1 0 0 1 1 1 0 Cutinase DUF3159 PF11361.8 ORF95284 - 0.039 13.7 0.1 0.05 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3159) FOXP-CC PF16159.5 ORF92803 - 0.01 16.5 0.0 0.013 16.1 0.0 1.3 1 0 0 1 1 1 0 FOXP coiled-coil domain Fer4_12 PF13353.6 ORF89759 - 3.1e-31 108.5 0.0 3.5e-31 108.3 0.0 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 ORF89759 - 6e-22 78.0 0.0 7.1e-22 77.8 0.0 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF948 PF06103.11 ORF89668 - 0.0071 16.6 0.5 0.016 15.5 0.5 1.7 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Not3 PF04065.15 ORF89668 - 0.0082 15.6 5.6 0.009 15.5 5.6 1.0 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component NPV_P10 PF05531.12 ORF89668 - 0.012 16.1 1.2 0.19 12.2 0.2 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein COG2 PF06148.11 ORF89668 - 0.016 15.3 3.7 0.023 14.8 3.7 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 SH3BP5 PF05276.14 ORF89668 - 0.036 13.9 5.9 0.55 10.0 1.6 2.0 1 1 1 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) PEP-utilisers_N PF05524.13 ORF89668 - 0.051 13.7 1.5 0.063 13.4 1.5 1.1 1 0 0 1 1 1 0 PEP-utilising enzyme, N-terminal TraC PF07820.12 ORF89668 - 0.19 12.1 3.1 4.5 7.7 2.1 2.1 1 1 1 2 2 2 0 TraC-like protein TolA_bind_tri PF16331.5 ORF89668 - 0.19 11.8 3.7 0.25 11.4 0.4 2.4 2 1 0 2 2 2 0 TolA binding protein trimerisation KapB PF08810.10 ORF89668 - 0.33 11.1 2.3 3 8.1 1.9 2.5 2 1 0 2 2 2 0 Kinase associated protein B RIX1 PF08167.12 ORF88088 - 0.00062 19.5 0.5 0.0008 19.2 0.5 1.3 1 1 0 1 1 1 1 rRNA processing/ribosome biogenesis CRAL_TRIO PF00650.20 ORF87987 - 7.8e-10 38.7 0.0 9.2e-10 38.5 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain BEN PF10523.9 ORF87987 - 0.058 13.6 0.0 0.097 12.9 0.0 1.4 1 0 0 1 1 1 0 BEN domain CRAL_TRIO_2 PF13716.6 ORF87987 - 0.1 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain Ribonuc_L-PSP PF01042.21 ORF87178 - 1.5e-37 128.3 0.3 1.6e-37 128.2 0.3 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF3857 PF12969.7 ORF87178 - 0.037 14.1 0.0 0.043 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3857) GSCFA PF08885.11 ORF86653 - 0.12 12.0 1.5 4.1 7.0 0.0 2.0 2 0 0 2 2 2 0 GSCFA family DUF2834 PF11196.8 ORF86642 - 0.0041 17.4 0.1 0.0049 17.2 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2834) Dus PF01207.17 ORF86542 - 6.5e-20 71.4 0.0 7.2e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NADHdh PF00146.21 ORF85413 - 1.3e-10 41.1 2.6 1.4e-10 41.0 2.6 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Peptidase_C74 PF12387.8 ORF85130 - 0.054 13.0 0.3 0.088 12.3 0.3 1.4 1 0 0 1 1 1 0 Pestivirus NS2 peptidase AJAP1_PANP_C PF15298.6 ORF8469 - 0.13 12.5 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 AJAP1/PANP C-terminus zf-C2HE PF16278.5 ORF8313 - 0.037 14.5 0.0 0.054 13.9 0.0 1.2 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger Mito_carr PF00153.27 ORF82683 - 0.063 13.2 0.1 0.091 12.7 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial carrier protein DUF1329 PF07044.11 ORF82515 - 0.054 12.8 0.1 0.064 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1329) DUF4094 PF13334.6 ORF82515 - 0.1 13.0 1.0 0.18 12.3 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) DUF2956 PF11169.8 ORF82515 - 0.86 9.8 8.8 3.5 7.9 2.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2956) TMPIT PF07851.13 ORF82515 - 7 5.8 9.3 4 6.6 6.8 1.4 1 1 0 1 1 1 0 TMPIT-like protein Nucleoside_tran PF01733.18 ORF82105 - 2.6e-05 23.8 1.2 2.8e-05 23.7 1.2 1.1 1 0 0 1 1 1 1 Nucleoside transporter zf-C3HC4_3 PF13920.6 ORF81623 - 2.1e-07 30.7 7.1 3e-07 30.2 7.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF81623 - 1.4e-06 28.6 7.3 1.9e-06 28.1 7.3 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF81623 - 0.0077 16.2 8.2 0.012 15.6 8.2 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-NADH-PPase PF09297.11 ORF81623 - 0.37 10.5 7.7 0.35 10.6 0.4 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-RING_4 PF14570.6 ORF81623 - 1.7 8.5 9.1 16 5.3 9.1 2.1 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain WES_acyltransf PF03007.16 ORF81568 - 1.7e-05 24.8 0.0 2.1e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF81568 - 0.00093 17.9 0.1 0.001 17.7 0.1 1.0 1 0 0 1 1 1 1 Alcohol acetyltransferase DHHC PF01529.20 ORF81365 - 0.014 15.5 0.5 0.017 15.2 0.5 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase CSD PF00313.22 ORF81031 - 4.4e-06 26.4 0.0 6.9e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF81031 - 0.038 13.7 0.2 0.038 13.7 0.2 1.8 2 0 0 2 2 2 0 Ribonuclease B OB domain ZZ PF00569.17 ORF80498 - 0.25 11.2 3.0 0.46 10.3 3.0 1.4 1 0 0 1 1 1 0 Zinc finger, ZZ type CBFD_NFYB_HMF PF00808.23 ORF80131 - 3.9e-11 43.1 0.0 5.4e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF80131 - 8.2e-07 29.4 0.0 1.1e-06 29.0 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Ribosomal_60s PF00428.19 ORF80131 - 0.087 13.4 0.7 0.16 12.6 0.7 1.5 1 0 0 1 1 1 0 60s Acidic ribosomal protein FPN1 PF06963.12 ORF79495 - 0.016 13.8 0.1 0.019 13.5 0.1 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) DUF1295 PF06966.12 ORF79455 - 4.1e-21 75.6 0.9 5e-21 75.3 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) ICMT PF04140.14 ORF79455 - 0.00059 20.2 0.1 0.0013 19.1 0.1 1.6 1 1 1 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.17 ORF79455 - 0.003 16.4 0.4 0.0036 16.1 0.4 1.1 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family TauE PF01925.19 ORF7924 - 0.008 15.8 1.0 0.0082 15.8 1.0 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE MFS_1 PF07690.16 ORF7924 - 0.095 11.6 7.2 0.11 11.5 7.2 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily NotI PF12183.8 ORF79221 - 0.01 15.2 0.3 0.012 15.0 0.3 1.1 1 0 0 1 1 1 0 Restriction endonuclease NotI Fib_alpha PF08702.10 ORF79221 - 0.012 15.8 4.6 0.015 15.5 4.6 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family PB1 PF00564.24 ORF79221 - 0.013 15.4 1.1 0.064 13.2 0.3 2.1 1 1 0 2 2 2 0 PB1 domain ArAE_2_N PF10337.9 ORF79221 - 0.029 13.4 1.1 0.032 13.3 1.1 1.0 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal SlyX PF04102.12 ORF79221 - 0.082 13.5 1.3 0.082 13.5 1.3 2.0 1 1 1 2 2 2 0 SlyX YtxH PF12732.7 ORF79221 - 0.12 13.0 2.7 5.4 7.6 0.2 2.2 2 0 0 2 2 2 0 YtxH-like protein V_ATPase_I PF01496.19 ORF79221 - 0.2 9.5 2.6 0.21 9.5 2.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1759 PF03564.15 ORF79221 - 0.21 11.5 3.6 0.42 10.5 0.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1759) AUX_IAA PF02309.16 ORF77392 - 0.16 11.8 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 AUX/IAA family DUF5473 PF17567.2 ORF77206 - 0.0071 16.6 1.4 0.01 16.1 1.4 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5473) Leuk-A4-hydro_C PF09127.11 ORF76360 - 2.4e-06 27.6 0.1 3.1e-06 27.3 0.1 1.2 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal CbiQ PF02361.16 ORF75340 - 0.029 14.0 6.2 0.034 13.8 6.2 1.0 1 0 0 1 1 1 0 Cobalt transport protein S1_2 PF13509.6 ORF75340 - 0.12 12.4 0.5 0.29 11.2 0.1 1.9 2 0 0 2 2 2 0 S1 domain DUF3624 PF12292.8 ORF75340 - 0.28 11.6 2.6 0.48 10.9 2.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3624) AAA_35 PF14516.6 ORF74085 - 0.024 13.5 2.7 0.028 13.3 2.7 1.0 1 0 0 1 1 1 0 AAA-like domain SLATT_5 PF18160.1 ORF74085 - 0.1 11.9 4.8 0.12 11.6 4.8 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 CRCB PF02537.15 ORF73561 - 6.7e-20 71.2 5.3 8.1e-20 70.9 5.3 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) GATase_4 PF13230.6 ORF73100 - 2.7e-34 118.3 0.0 2.8e-34 118.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Sugar_tr PF00083.24 ORF71768 - 1.8e-12 46.9 11.8 1.9e-12 46.8 11.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DNase-RNase PF02577.14 ORF71302 - 0.0043 16.7 0.4 0.0049 16.5 0.4 1.1 1 0 0 1 1 1 1 Bifunctional nuclease ECH_1 PF00378.20 ORF71071 - 2.8e-26 92.4 0.0 3e-26 92.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF71071 - 0.0091 15.5 0.0 0.0091 15.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Plectin PF00681.20 ORF71071 - 0.023 14.6 0.0 2.8 7.9 0.0 2.4 2 0 0 2 2 2 0 Plectin repeat DUF4033 PF13225.6 ORF70121 - 0.019 14.9 1.4 0.019 14.9 1.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4033) DUF948 PF06103.11 ORF69540 - 0.0071 16.6 0.5 0.016 15.5 0.5 1.7 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Not3 PF04065.15 ORF69540 - 0.0082 15.6 5.6 0.009 15.5 5.6 1.0 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component NPV_P10 PF05531.12 ORF69540 - 0.012 16.1 1.2 0.19 12.2 0.2 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein COG2 PF06148.11 ORF69540 - 0.016 15.3 3.7 0.023 14.8 3.7 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 SH3BP5 PF05276.14 ORF69540 - 0.036 13.9 5.9 0.55 10.0 1.6 2.0 1 1 1 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) PEP-utilisers_N PF05524.13 ORF69540 - 0.051 13.7 1.5 0.063 13.4 1.5 1.1 1 0 0 1 1 1 0 PEP-utilising enzyme, N-terminal TraC PF07820.12 ORF69540 - 0.19 12.1 3.1 4.5 7.7 2.1 2.1 1 1 1 2 2 2 0 TraC-like protein TolA_bind_tri PF16331.5 ORF69540 - 0.19 11.8 3.7 0.25 11.4 0.4 2.4 2 1 0 2 2 2 0 TolA binding protein trimerisation KapB PF08810.10 ORF69540 - 0.33 11.1 2.3 3 8.1 1.9 2.5 2 1 0 2 2 2 0 Kinase associated protein B Colicin-DNase PF12639.7 ORF69122 - 0.014 16.2 0.1 0.017 15.9 0.1 1.1 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin UspB PF10625.9 ORF69122 - 0.14 12.1 0.4 0.2 11.7 0.4 1.2 1 0 0 1 1 1 0 Universal stress protein B (UspB) Aldolase PF01081.19 ORF68987 - 0.04 13.3 0.0 0.049 13.1 0.0 1.1 1 0 0 1 1 1 0 KDPG and KHG aldolase Methyltransf_24 PF13578.6 ORF68215 - 0.015 16.3 0.0 0.026 15.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain mRNA_cap_C PF03919.15 ORF67819 - 0.0036 17.9 0.9 0.0042 17.7 0.9 1.1 1 0 0 1 1 1 1 mRNA capping enzyme, C-terminal domain Ribosomal_L23eN PF03939.13 ORF66963 - 2.1e-17 63.0 12.6 3.3e-17 62.4 12.6 1.3 1 0 0 1 1 1 1 Ribosomal protein L23, N-terminal domain PetG PF02529.15 ORF65455 - 9.2e-15 54.2 0.4 1.3e-14 53.7 0.4 1.3 1 0 0 1 1 1 1 Cytochrome B6-F complex subunit 5 UPF0114 PF03350.16 ORF65455 - 0.012 15.8 0.1 0.016 15.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 FtsX PF02687.21 ORF65455 - 0.035 14.6 1.3 0.035 14.6 1.3 1.6 2 0 0 2 2 2 0 FtsX-like permease family SSB PF00436.25 ORF64785 - 3.9e-13 49.3 0.0 4.2e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Single-strand binding protein family LMSTEN PF07988.12 ORF64442 - 0.059 12.9 0.1 0.16 11.5 0.1 1.7 1 0 0 1 1 1 0 LMSTEN motif BLUF PF04940.12 ORF63812 - 0.014 15.5 0.6 0.024 14.8 0.3 1.5 1 1 0 1 1 1 0 Sensors of blue-light using FAD SLBP_RNA_bind PF15247.6 ORF63812 - 0.07 13.3 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain TcdA_TcdB PF12919.7 ORF63812 - 6 6.1 15.0 6.3 6.0 15.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB catalytic glycosyltransferase domain DUF4140 PF13600.6 ORF63812 - 6.4 7.3 8.3 2.8 8.4 5.3 1.8 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF772 PF05598.11 ORF63515 - 0.015 15.3 0.3 0.021 14.8 0.3 1.3 1 0 0 1 1 1 0 Transposase domain (DUF772) Cpta_toxin PF07254.12 ORF6340 - 8.2e-42 142.3 5.0 9.3e-42 142.1 5.0 1.0 1 0 0 1 1 1 1 Membrane-bound toxin component of toxin-antitoxin system Halogen_Hydrol PF10112.9 ORF63369 - 9.7 6.2 7.2 12 5.8 7.0 1.4 1 1 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Hormone_6 PF00236.18 ORF6268 - 0.26 11.3 4.7 0.98 9.5 3.4 1.9 1 1 1 2 2 2 0 Glycoprotein hormone rhaM PF05336.13 ORF62540 - 8.6e-29 99.8 1.4 9.5e-29 99.6 1.4 1.0 1 0 0 1 1 1 1 L-rhamnose mutarotase CbiQ PF02361.16 ORF62130 - 0.28 10.8 7.4 0.32 10.6 7.4 1.0 1 0 0 1 1 1 0 Cobalt transport protein Lipoprotein_X PF03305.13 ORF61603 - 0.0028 17.4 3.7 0.013 15.2 0.9 2.0 1 1 1 2 2 2 2 Mycoplasma MG185/MG260 protein ABC2_membrane_3 PF12698.7 ORF61603 - 0.15 11.1 0.5 0.16 11.0 0.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein YlbE PF14003.6 ORF61255 - 0.11 13.0 2.1 0.12 12.8 0.5 1.8 1 1 1 2 2 2 0 YlbE-like protein Fe_hyd_SSU PF02256.17 ORF61255 - 1.3 9.2 5.3 1.9 8.6 1.8 2.7 2 1 0 2 2 2 0 Iron hydrogenase small subunit EMP24_GP25L PF01105.24 ORF61097 - 3e-09 37.1 0.0 3.4e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD T_cell_tran_alt PF15128.6 ORF61097 - 0.16 11.8 0.1 0.21 11.4 0.1 1.2 1 0 0 1 1 1 0 T-cell leukemia translocation-altered TTL PF03133.15 ORF60758 - 5.4e-30 104.5 1.0 5.6e-30 104.5 1.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF60758 - 0.1 11.8 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 YheC/D like ATP-grasp Anti-TRAP PF15777.5 ORF59434 - 1.8 8.6 7.1 99 3.0 7.1 2.3 1 1 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF5551 PF17705.1 ORF59428 - 0.03 13.9 0.3 0.041 13.5 0.2 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5551) TMEM220 PF15071.6 ORF58385 - 0.00037 21.2 0.1 0.00044 21.0 0.1 1.1 1 0 0 1 1 1 1 Transmembrane family 220, helix NADH-u_ox-rdase PF10785.9 ORF58385 - 0.00085 20.0 1.6 0.001 19.7 1.6 1.1 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit FHA PF00498.26 ORF57643 - 1.5e-12 47.7 0.0 3.5e-12 46.5 0.0 1.6 2 0 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 ORF57643 - 0.00011 22.4 0.0 0.00018 21.7 0.0 1.3 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain CT_A_B PF02626.15 ORF57643 - 0.21 11.2 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 Carboxyltransferase domain, subdomain A and B PBP_sp32 PF07222.12 ORF57174 - 0.13 11.7 0.5 0.14 11.6 0.5 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Mito_carr PF00153.27 ORF56540 - 1.3e-13 50.7 0.1 1.5e-13 50.5 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein Daxx PF03344.15 ORF56529 - 0.17 11.9 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Daxx N-terminal Rassf1C-interacting domain Nairovirus_M PF07948.11 ORF55866 - 0.1 10.8 0.0 0.12 10.5 0.0 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like Pkinase PF00069.25 ORF55780 - 5.8e-19 68.5 0.0 6.4e-19 68.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF55780 - 4.7e-08 32.6 0.0 5.3e-08 32.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF55780 - 2.9e-06 26.8 0.0 3.2e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Kinase-like DUF1803 PF08820.10 ORF55780 - 0.066 13.3 0.2 0.094 12.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1803) DEK_C PF08766.11 ORF55052 - 5.1e-08 32.7 0.5 8.9e-08 31.9 0.5 1.4 1 0 0 1 1 1 1 DEK C terminal domain ACR_tran PF00873.19 ORF54237 - 2.4e-17 62.0 1.0 2.6e-17 61.9 1.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family LMSTEN PF07988.12 ORF53440 - 0.059 12.9 0.1 0.16 11.5 0.1 1.7 1 0 0 1 1 1 0 LMSTEN motif DRIM PF07539.12 ORF53268 - 0.011 14.1 1.9 0.016 13.6 1.8 1.4 1 1 0 1 1 1 0 Down-regulated in metastasis YkyA PF10368.9 ORF53268 - 0.019 14.6 0.6 0.019 14.6 0.6 1.5 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein MatP_C PF17414.2 ORF5305 - 0.0081 16.3 0.1 0.014 15.6 0.1 1.3 1 0 0 1 1 1 1 MatP C-terminal ribbon-helix-helix domain L27_1 PF09058.10 ORF5305 - 0.038 14.0 0.5 0.065 13.2 0.5 1.3 1 0 0 1 1 1 0 L27_1 BPD_transp_2 PF02653.16 ORF52908 - 4.4e-14 52.3 15.7 4.8e-14 52.2 15.7 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Transport_MerF PF11431.8 ORF51660 - 0.0094 15.8 0.9 0.1 12.5 0.1 2.2 2 0 0 2 2 2 1 Membrane transport protein MerF ThiF PF00899.21 ORF51436 - 0.099 12.0 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 ThiF family EF-hand_1 PF00036.32 ORF51198 - 1.7e-19 67.8 9.7 2.4e-07 29.8 1.7 3.3 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF51198 - 2.7e-14 51.8 7.0 1.6e-06 27.6 0.9 3.3 3 0 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF51198 - 3.5e-13 49.8 5.9 4e-09 36.8 3.7 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF51198 - 8.7e-13 47.9 5.5 0.00051 19.8 0.1 3.1 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF51198 - 2.1e-11 42.7 7.8 6e-06 25.5 2.0 3.3 3 0 0 3 3 3 3 EF hand SPARC_Ca_bdg PF10591.9 ORF51198 - 0.028 14.7 1.3 0.21 11.9 0.8 2.0 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF51198 - 0.054 13.5 5.1 6.3 6.8 0.3 3.0 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 ORF51198 - 0.14 12.3 2.7 8.1 6.7 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2666) UB2H PF14814.6 ORF51051 - 0.032 14.2 0.1 0.055 13.5 0.1 1.5 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain BRCT_2 PF16589.5 ORF50612 - 1.1e-12 48.1 0.1 1.4e-12 47.8 0.1 1.1 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 ORF50612 - 0.00045 20.5 0.0 0.00089 19.6 0.0 1.7 1 1 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain LIG3_BRCT PF16759.5 ORF50612 - 0.094 13.0 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 DNA ligase 3 BRCT domain CbiQ PF02361.16 ORF50244 - 0.28 10.8 7.4 0.32 10.6 7.4 1.0 1 0 0 1 1 1 0 Cobalt transport protein Baculo_PP31 PF05311.11 ORF49899 - 0.087 12.3 1.7 0.1 12.1 1.7 1.1 1 0 0 1 1 1 0 Baculovirus 33KDa late protein (PP31) DUF2200 PF09966.9 ORF48868 - 0.03 14.5 0.0 0.038 14.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2200) HCMVantigenic_N PF12154.8 ORF48261 - 0.55 10.4 4.0 0.98 9.6 3.0 1.9 1 1 1 2 2 2 0 Glycoprotein B N-terminal antigenic domain of HCMV SBP_bac_5 PF00496.22 ORF48101 - 1.1e-07 31.2 0.5 1.8e-07 30.5 0.1 1.5 1 1 1 2 2 2 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF4038 PF13204.6 ORF48101 - 0.027 14.1 0.1 0.03 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4038) SBP_bac_3 PF00497.20 ORF48101 - 0.081 12.3 0.1 0.19 11.1 0.0 1.6 2 0 0 2 2 2 0 Bacterial extracellular solute-binding proteins, family 3 Aminotran_1_2 PF00155.21 ORF46967 - 0.0011 18.2 0.0 0.0012 18.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II FAD_binding_6 PF00970.24 ORF46356 - 0.051 13.9 0.0 0.22 11.9 0.0 1.8 1 1 1 2 2 2 0 Oxidoreductase FAD-binding domain Na_H_Exchanger PF00999.21 ORF45838 - 5.1e-08 32.1 0.6 5.6e-08 32.0 0.6 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TetR_C_9 PF14514.6 ORF45838 - 0.16 12.1 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain FA_desaturase PF00487.24 ORF45250 - 0.74 9.6 1.9 0.79 9.5 1.9 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2207 PF09972.9 ORF45250 - 2.4 6.8 4.7 2.4 6.8 4.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5336 PF17270.2 ORF45250 - 8.4 6.0 15.2 12 5.5 15.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5336) Flu_NS1 PF00600.19 ORF45025 - 0.015 14.9 0.5 0.018 14.6 0.5 1.0 1 0 0 1 1 1 0 Influenza non-structural protein (NS1) SVIP PF15811.5 ORF45025 - 0.032 14.7 8.0 0.15 12.6 0.0 2.2 2 0 0 2 2 2 0 Small VCP/p97-interacting protein MAS20 PF02064.15 ORF45025 - 0.26 11.4 8.4 0.37 10.9 8.4 1.3 1 0 0 1 1 1 0 MAS20 protein import receptor P16-Arc PF04699.14 ORF43962 - 3.6e-09 37.3 4.3 4.2e-09 37.0 4.3 1.1 1 0 0 1 1 1 1 ARP2/3 complex 16 kDa subunit (p16-Arc) CagD PF16567.5 ORF43962 - 0.017 14.9 1.0 0.018 14.9 0.5 1.4 1 1 0 1 1 1 0 Pathogenicity island component CagD Spermine_synth PF01564.17 ORF43962 - 0.054 12.9 1.7 0.053 12.9 1.7 1.1 1 0 0 1 1 1 0 Spermine/spermidine synthase domain CENP-N PF05238.13 ORF43962 - 0.09 12.1 3.3 0.094 12.0 3.3 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like EMC3_TMCO1 PF01956.16 ORF43962 - 2 8.1 4.1 2.2 8.0 4.1 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like TRAM_LAG1_CLN8 PF03798.16 ORF43953 - 5.2e-06 26.3 5.4 5.8e-06 26.2 5.4 1.0 1 0 0 1 1 1 1 TLC domain DUF1648 PF07853.11 ORF43953 - 0.0076 15.9 0.3 0.016 14.8 0.3 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1648) SNARE PF05739.19 ORF43953 - 6.3 6.9 5.8 13 5.9 5.8 1.5 1 0 0 1 1 1 0 SNARE domain RtcB PF01139.17 ORF43687 - 1.6e-13 50.7 0.0 1.8e-13 50.5 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB EIIBC-GUT_C PF07663.11 ORF43687 - 0.11 12.7 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II C-terminus DUF2700 PF10912.8 ORF43540 - 0.21 11.6 0.0 0.26 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2700) ATC_hydrolase PF14196.6 ORF43411 - 0.05 14.4 3.7 0.051 14.3 3.7 1.2 1 0 0 1 1 1 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase Spore_III_AB PF09548.10 ORF43411 - 0.075 13.1 2.1 0.086 12.9 2.1 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) ERp29 PF07749.12 ORF43411 - 0.29 12.1 9.0 0.56 11.1 9.0 1.6 1 1 0 1 1 1 0 Endoplasmic reticulum protein ERp29, C-terminal domain Utp8 PF10395.9 ORF43411 - 0.39 9.2 6.4 0.38 9.2 6.4 1.0 1 0 0 1 1 1 0 Utp8 family THB PF18362.1 ORF43411 - 0.68 9.6 4.8 11 5.7 0.1 3.0 3 0 0 3 3 3 0 Tri-helix bundle domain TCTP PF00838.17 ORF43411 - 2.6 8.4 11.2 2.3 8.6 10.5 1.3 1 1 0 1 1 1 0 Translationally controlled tumour protein LGT PF01790.18 ORF42614 - 2.1e-05 23.9 0.5 2.3e-05 23.8 0.5 1.1 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase CHORD PF04968.12 ORF42154 - 0.064 14.0 1.3 0.14 12.9 0.4 1.9 2 0 0 2 2 2 0 CHORD Glyco_transf_8C PF08437.10 ORF4195 - 0.11 12.6 0.1 0.19 11.8 0.1 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 8 C-terminal Helicase_C PF00271.31 ORF40967 - 3.9e-23 81.9 0.3 5.8e-23 81.4 0.3 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain tRNA-synt_1b PF00579.25 ORF40967 - 0.00013 21.4 0.0 0.00013 21.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) EGF_CA PF07645.15 ORF40780 - 2.4 8.4 4.2 2.4 8.4 0.4 2.5 3 0 0 3 3 3 0 Calcium-binding EGF domain YkyA PF10368.9 ORF40629 - 0.019 14.6 0.6 0.019 14.6 0.6 1.7 1 1 0 2 2 2 0 Putative cell-wall binding lipoprotein DUF1320 PF07030.12 ORF40550 - 0.033 14.3 0.2 0.55 10.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1320) PFU PF09070.11 ORF40550 - 0.1 12.9 0.0 0.44 10.8 0.0 1.8 2 0 0 2 2 2 0 PFU (PLAA family ubiquitin binding) DUF2700 PF10912.8 ORF40493 - 0.21 11.6 0.0 0.26 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2700) PAS_8 PF13188.7 ORF40419 - 0.001 19.0 0.0 0.0015 18.5 0.0 1.2 1 0 0 1 1 1 1 PAS domain APG17 PF04108.12 ORF40419 - 0.0015 17.8 0.5 0.0018 17.5 0.5 1.1 1 0 0 1 1 1 1 Autophagy protein Apg17 PAS PF00989.25 ORF40419 - 0.013 15.4 0.0 0.016 15.2 0.0 1.1 1 0 0 1 1 1 0 PAS fold PAS_3 PF08447.12 ORF40419 - 0.014 15.6 0.0 0.02 15.2 0.0 1.3 1 0 0 1 1 1 0 PAS fold PAS_9 PF13426.7 ORF40419 - 0.069 13.4 0.1 0.098 12.9 0.1 1.2 1 0 0 1 1 1 0 PAS domain SusD-like_2 PF12771.7 ORF40419 - 0.09 11.7 0.0 0.1 11.5 0.0 1.0 1 0 0 1 1 1 0 Starch-binding associating with outer membrane Myb_Cef PF11831.8 ORF40239 - 0.056 13.0 0.0 0.056 13.0 0.0 1.1 1 0 0 1 1 1 0 pre-mRNA splicing factor component Dynamitin PF04912.14 ORF40233 - 0.00016 21.1 1.3 0.00018 21.0 1.3 1.0 1 0 0 1 1 1 1 Dynamitin Fez1 PF06818.15 ORF40233 - 0.0071 16.8 1.2 0.0085 16.6 1.2 1.0 1 0 0 1 1 1 1 Fez1 NUDE_C PF04880.13 ORF40233 - 0.046 14.2 0.7 0.054 14.0 0.7 1.2 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Sipho_Gp157 PF05565.11 ORF40233 - 0.059 13.4 0.6 0.079 13.0 0.6 1.3 1 0 0 1 1 1 0 Siphovirus Gp157 Spc7 PF08317.11 ORF40233 - 0.092 11.6 1.4 0.11 11.3 1.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein CDC73_N PF16050.5 ORF40233 - 0.097 12.0 1.9 0.11 11.8 1.9 1.0 1 0 0 1 1 1 0 Paf1 complex subunit CDC73 N-terminal DUF5320 PF17253.2 ORF40233 - 0.1 13.7 2.4 3.5 8.8 0.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5320) CENP-F_leu_zip PF10473.9 ORF40233 - 0.23 11.5 3.5 1.4 9.0 0.5 2.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ZapB PF06005.12 ORF40233 - 0.31 11.5 3.0 1.3 9.5 2.8 1.9 1 1 0 1 1 1 0 Cell division protein ZapB Uso1_p115_C PF04871.13 ORF40233 - 0.33 11.3 4.5 1.1 9.6 0.5 2.0 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Mito_fiss_reg PF05308.11 ORF40233 - 0.38 10.8 5.3 0.52 10.3 5.3 1.3 1 1 0 1 1 1 0 Mitochondrial fission regulator DUF2514 PF10721.9 ORF40233 - 2.1 8.3 14.4 4.4 7.3 14.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2514) DUF2381 PF09544.10 ORF40233 - 3.4 7.1 13.4 13 5.2 13.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2381) DUF4140 PF13600.6 ORF40233 - 5.3 7.5 10.2 13 6.3 1.7 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) RabGAP-TBC PF00566.18 ORF39897 - 1.1e-27 97.2 3.1 1.1e-27 97.1 3.1 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain PP2C PF00481.21 ORF39809 - 4.3e-16 59.3 0.0 4.9e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF39809 - 0.00041 20.3 0.2 0.00048 20.1 0.2 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) DUF3562 PF12085.8 ORF39809 - 0.12 12.1 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) Xan_ur_permease PF00860.20 ORF39324 - 8.6e-06 24.7 0.1 1e-05 24.4 0.1 1.0 1 0 0 1 1 1 1 Permease family PsbJ PF01788.17 ORF39305 - 8.6e-10 38.3 5.1 8.6e-10 38.3 5.1 1.7 2 0 0 2 2 2 1 PsbJ Pigment_DH PF06324.11 ORF38871 - 0.015 15.3 1.7 0.031 14.3 0.4 2.1 2 0 0 2 2 2 0 Pigment-dispersing hormone (PDH) Sod_Ni PF09055.11 ORF37085 - 9.1e-18 65.0 0.0 9.8e-18 64.9 0.0 1.0 1 0 0 1 1 1 1 Nickel-containing superoxide dismutase MobC PF05713.11 ORF37085 - 0.00067 20.1 0.1 0.0039 17.6 0.0 2.2 2 0 0 2 2 2 1 Bacterial mobilisation protein (MobC) TFIIF_beta PF02270.15 ORF36927 - 0.098 12.8 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 TFIIF, beta subunit HTH domain TPR_2 PF07719.17 ORF36558 - 5.9e-11 41.6 0.5 1.3e-05 24.9 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF36558 - 9.3e-10 37.9 0.1 0.00057 19.6 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF36558 - 2.9e-07 30.8 5.0 5.9e-06 26.7 0.6 2.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF36558 - 5.1e-07 30.2 4.3 5.1e-07 30.2 4.3 1.7 2 1 0 2 2 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF36558 - 1.9e-05 25.1 1.8 2.9e-05 24.5 1.8 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF36558 - 2.9e-05 24.0 0.2 0.00021 21.3 0.0 2.0 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.6 ORF36558 - 6.4e-05 23.3 3.7 0.00016 22.1 0.1 2.5 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF36558 - 8.2e-05 22.8 3.4 0.00027 21.2 3.4 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF36558 - 0.00019 21.4 0.1 0.029 14.6 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF36558 - 0.00026 20.8 0.4 0.36 11.0 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF36558 - 0.00027 21.3 4.8 0.052 14.2 2.0 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat BTAD PF03704.17 ORF36558 - 0.002 18.5 1.3 0.0042 17.5 0.5 1.8 1 1 1 2 2 2 1 Bacterial transcriptional activator domain TPR_17 PF13431.6 ORF36558 - 0.0047 17.2 0.3 13 6.5 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF36558 - 0.0052 17.0 0.7 0.012 15.9 0.4 1.7 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_MalT PF17874.1 ORF36558 - 0.011 15.1 0.5 0.013 14.9 0.5 1.2 1 0 0 1 1 1 0 MalT-like TPR region TPR_15 PF13429.6 ORF36558 - 0.016 14.4 1.4 0.64 9.2 0.2 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat DUF3856 PF12968.7 ORF36558 - 0.052 13.6 0.3 0.3 11.1 0.3 2.0 1 1 0 1 1 1 0 Domain of Unknown Function (DUF3856) TPR_9 PF13371.6 ORF36558 - 0.062 13.5 2.2 0.087 13.0 2.2 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF36558 - 0.069 13.1 1.8 2.3 8.2 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat Prominin PF05478.11 ORF36325 - 0.4 8.6 4.6 0.41 8.6 4.6 1.0 1 0 0 1 1 1 0 Prominin DUF883 PF05957.13 ORF36325 - 2.9 8.6 8.4 4.4 8.0 4.3 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF4407 PF14362.6 ORF36325 - 8.8 5.6 11.1 12 5.1 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FHA PF00498.26 ORF35879 - 4.6e-09 36.5 0.2 6.7e-09 36.0 0.1 1.3 1 1 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF35879 - 2.5e-06 27.7 0.0 5.6e-06 26.6 0.0 1.6 1 1 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FlgI PF02119.16 ORF35879 - 0.013 14.4 0.4 0.015 14.2 0.4 1.0 1 0 0 1 1 1 0 Flagellar P-ring protein Acetyltransf_2 PF00797.17 ORF35879 - 0.061 13.1 0.0 0.071 12.9 0.0 1.1 1 0 0 1 1 1 0 N-acetyltransferase DRIM PF07539.12 ORF35173 - 0.011 14.1 1.9 0.016 13.6 1.8 1.4 1 1 0 1 1 1 0 Down-regulated in metastasis YkyA PF10368.9 ORF35173 - 0.019 14.6 0.6 0.019 14.6 0.6 1.5 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein Ac81 PF05820.11 ORF34934 - 0.011 15.3 0.1 0.013 15.1 0.1 1.2 1 0 0 1 1 1 0 Baculoviridae AC81 YlbE PF14003.6 ORF33598 - 0.11 13.0 2.1 0.12 12.8 0.5 1.8 1 1 1 2 2 2 0 YlbE-like protein Fe_hyd_SSU PF02256.17 ORF33598 - 1.3 9.2 5.3 1.9 8.6 1.8 2.7 2 1 0 2 2 2 0 Iron hydrogenase small subunit HCMVantigenic_N PF12154.8 ORF327 - 0.55 10.4 4.0 0.98 9.6 3.0 1.9 1 1 1 2 2 2 0 Glycoprotein B N-terminal antigenic domain of HCMV DKCLD PF08068.12 ORF32672 - 0.12 12.5 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 DKCLD (NUC011) domain GATase_4 PF13230.6 ORF31004 - 2.7e-34 118.3 0.0 2.8e-34 118.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF5305 PF17231.2 ORF29428 - 0.065 12.6 0.1 0.069 12.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) SUR7 PF06687.12 ORF29428 - 0.075 12.6 1.0 0.093 12.3 1.0 1.1 1 0 0 1 1 1 0 SUR7/PalI family ribosomal_L24 PF17136.4 ORF29308 - 1.3e-23 83.2 0.1 1.3e-23 83.2 0.1 1.6 2 0 0 2 2 2 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 ORF29308 - 3.5e-05 23.6 3.2 8.2e-05 22.4 3.2 1.7 1 0 0 1 1 1 1 KOW motif FMO-like PF00743.19 ORF28763 - 1.5e-05 23.7 0.4 0.0042 15.6 0.1 2.0 1 1 0 2 2 2 2 Flavin-binding monooxygenase-like Helicase_C PF00271.31 ORF28023 - 1.1e-20 74.0 0.1 3.1e-20 72.6 0.0 1.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF28023 - 0.0098 15.1 0.0 0.012 14.9 0.0 1.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase DSPc PF00782.20 ORF27779 - 3.3e-16 59.3 0.1 3.6e-16 59.2 0.1 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF27779 - 0.0048 16.5 0.0 0.0048 16.5 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase2 PF03162.13 ORF27779 - 0.017 14.7 0.1 0.02 14.5 0.1 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family Init_tRNA_PT PF04179.12 ORF27779 - 0.042 14.1 0.0 0.047 14.0 0.0 1.2 1 0 0 1 1 1 0 Rit1 DUSP-like domain DUF4368 PF14287.6 ORF27767 - 0.029 14.7 1.6 2.2 8.6 0.2 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4368) PBP_sp32 PF07222.12 ORF26182 - 0.13 11.7 0.5 0.14 11.6 0.5 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Indigoidine_A PF04227.12 ORF25961 - 8.3e-27 94.3 0.9 9.6e-27 94.1 0.9 1.1 1 0 0 1 1 1 1 Indigoidine synthase A like protein MinC_N PF05209.13 ORF25961 - 0.0075 16.2 0.1 0.016 15.1 0.0 1.5 1 1 1 2 2 2 1 Septum formation inhibitor MinC, N-terminal domain AP2 PF00847.20 ORF25955 - 0.00062 20.0 0.5 0.00062 20.0 0.5 2.1 2 0 0 2 2 2 1 AP2 domain DUF2188 PF09954.9 ORF25955 - 0.55 10.4 4.8 0.65 10.2 0.0 2.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2188) BLM10_mid PF16507.5 ORF25553 - 0.049 12.3 0.0 0.053 12.2 0.0 1.0 1 0 0 1 1 1 0 Proteasome-substrate-size regulator, mid region DUF2672 PF10878.8 ORF24954 - 0.028 14.4 0.9 0.042 13.8 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2672) CBAH PF02275.18 ORF24796 - 0.0012 18.5 0.0 0.0014 18.4 0.0 1.1 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family Dickkopf_N PF04706.12 ORF24754 - 0.17 12.4 2.3 0.28 11.7 0.1 2.3 3 0 0 3 3 3 0 Dickkopf N-terminal cysteine-rich region DUF948 PF06103.11 ORF24182 - 0.0031 17.7 0.4 0.0068 16.6 0.4 1.7 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Not3 PF04065.15 ORF24182 - 0.0044 16.5 5.6 0.0048 16.4 5.6 1.0 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component NPV_P10 PF05531.12 ORF24182 - 0.0048 17.3 1.0 0.096 13.2 0.1 2.1 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein COG2 PF06148.11 ORF24182 - 0.02 15.0 3.5 0.029 14.4 3.5 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 TolA_bind_tri PF16331.5 ORF24182 - 0.027 14.5 2.6 0.084 13.0 0.2 2.5 2 2 0 2 2 2 0 TolA binding protein trimerisation PEP-utilisers_N PF05524.13 ORF24182 - 0.053 13.7 1.9 0.067 13.4 1.9 1.1 1 0 0 1 1 1 0 PEP-utilising enzyme, N-terminal Snapin_Pallidin PF14712.6 ORF24182 - 0.062 13.7 4.2 0.65 10.4 0.4 2.2 1 1 1 2 2 2 0 Snapin/Pallidin TraC PF07820.12 ORF24182 - 0.071 13.4 3.7 1.6 9.1 2.6 2.1 1 1 1 2 2 2 0 TraC-like protein SH3BP5 PF05276.14 ORF24182 - 0.073 12.9 5.9 1.5 8.6 1.7 1.9 1 1 1 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) DUF3103 PF11301.8 ORF24182 - 0.23 10.2 2.3 0.26 10.1 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3103) Jnk-SapK_ap_N PF09744.9 ORF24182 - 0.26 11.5 9.8 0.88 9.8 9.8 1.7 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Csm1_N PF18504.1 ORF24182 - 0.43 11.0 7.5 0.38 11.1 0.4 2.6 1 1 2 3 3 3 0 Csm1 N-terminal domain Fib_alpha PF08702.10 ORF24182 - 0.73 10.0 5.5 0.92 9.7 5.5 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family UPF0242 PF06785.11 ORF24182 - 0.93 9.6 9.2 6.8 6.7 0.4 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus GAS2 PF02187.17 ORF23940 - 0.00079 19.5 0.0 0.0013 18.8 0.0 1.3 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain Adenine_glyco PF03352.13 ORF23940 - 0.13 12.0 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Methyladenine glycosylase DUF4995 PF16386.5 ORF23736 - 0.2 11.7 2.7 1.6 8.8 0.1 2.6 1 1 2 3 3 3 0 Domain of unknown function GntP_permease PF02447.16 ORF23407 - 2.4e-26 92.4 0.5 2.9e-26 92.2 0.5 1.0 1 0 0 1 1 1 1 GntP family permease Methyltransf_20 PF12147.8 ORF22834 - 0.064 12.4 0.1 0.07 12.3 0.1 1.1 1 0 0 1 1 1 0 Putative methyltransferase PDR_CDR PF06422.12 ORF2064 - 0.0012 18.8 0.7 0.0017 18.2 0.7 1.3 1 0 0 1 1 1 1 CDR ABC transporter Spore_YhaL PF14147.6 ORF2064 - 0.048 13.4 1.8 0.1 12.3 1.8 1.5 1 0 0 1 1 1 0 Sporulation protein YhaL ThiF PF00899.21 ORF2025 - 0.099 12.0 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 ThiF family ABM PF03992.16 ORF19957 - 1.2e-28 99.0 0.1 1.5e-28 98.8 0.1 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase mit_SMPDase PF14724.6 ORF19531 - 0.18 9.7 0.0 0.18 9.7 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial-associated sphingomyelin phosphodiesterase 14-3-3 PF00244.20 ORF19406 - 4.3e-23 82.0 3.8 4.7e-23 81.9 3.8 1.0 1 0 0 1 1 1 1 14-3-3 protein FHA PF00498.26 ORF1904 - 4.6e-09 36.5 0.2 6.7e-09 36.0 0.1 1.3 1 1 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF1904 - 2.5e-06 27.7 0.0 5.6e-06 26.6 0.0 1.6 1 1 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FlgI PF02119.16 ORF1904 - 0.013 14.4 0.4 0.015 14.2 0.4 1.0 1 0 0 1 1 1 0 Flagellar P-ring protein Acetyltransf_2 PF00797.17 ORF1904 - 0.061 13.1 0.0 0.071 12.9 0.0 1.1 1 0 0 1 1 1 0 N-acetyltransferase DUF5305 PF17231.2 ORF18450 - 0.065 12.6 0.1 0.069 12.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) SUR7 PF06687.12 ORF18450 - 0.075 12.6 1.0 0.093 12.3 1.0 1.1 1 0 0 1 1 1 0 SUR7/PalI family Sod_Ni PF09055.11 ORF18300 - 1.9e-18 67.2 0.0 2.1e-18 67.1 0.0 1.0 1 0 0 1 1 1 1 Nickel-containing superoxide dismutase MobC PF05713.11 ORF18300 - 0.00078 19.9 0.1 0.0036 17.7 0.0 2.1 2 0 0 2 2 2 1 Bacterial mobilisation protein (MobC) PsbJ PF01788.17 ORF18261 - 8.6e-10 38.3 5.1 8.6e-10 38.3 5.1 1.9 2 0 0 2 2 2 1 PsbJ mRNA_cap_C PF03919.15 ORF17543 - 2.4e-06 28.2 0.0 3.4e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 mRNA capping enzyme, C-terminal domain p450 PF00067.22 ORF16401 - 1e-20 74.0 0.1 1e-20 73.9 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF4995 PF16386.5 ORF16340 - 0.2 11.7 2.7 1.6 8.8 0.1 2.6 1 1 2 3 3 3 0 Domain of unknown function Angiomotin_C PF12240.8 ORF15756 - 0.15 11.6 0.1 0.21 11.1 0.1 1.1 1 0 0 1 1 1 0 Angiomotin C terminal DUF5305 PF17231.2 ORF14568 - 0.065 12.6 0.1 0.069 12.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) SUR7 PF06687.12 ORF14568 - 0.075 12.6 1.0 0.093 12.3 1.0 1.1 1 0 0 1 1 1 0 SUR7/PalI family PDE8 PF08629.10 ORF14176 - 0.13 12.3 0.1 0.23 11.5 0.1 1.3 1 0 0 1 1 1 0 PDE8 phosphodiesterase LMSTEN PF07988.12 ORF13757 - 0.059 12.9 0.1 0.16 11.5 0.1 1.7 1 0 0 1 1 1 0 LMSTEN motif Inositol_P PF00459.25 ORF13247 - 0.00021 20.9 0.0 0.00024 20.7 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family WD40 PF00400.32 ORF13210 - 0.0046 17.8 0.0 0.97 10.4 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat ACR_tran PF00873.19 ORF12798 - 2.4e-17 62.0 1.0 2.6e-17 61.9 1.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family DUF2207 PF09972.9 ORF12142 - 0.04 12.7 0.6 0.043 12.6 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1700 PF08006.11 ORF12142 - 0.22 11.0 7.2 0.26 10.8 7.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF2417 PF10329.9 ORF12142 - 1.4 8.3 12.1 1.7 8.0 12.1 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Phage_integrase PF00589.22 ORF12116 - 7.1e-05 22.7 0.2 8.8e-05 22.4 0.2 1.1 1 0 0 1 1 1 1 Phage integrase family tRNA-synt_2d PF01409.20 ORF12116 - 0.038 13.5 0.0 0.048 13.1 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) UPF0228 PF05727.11 ORF12099 - 0.011 15.6 0.9 0.017 14.9 0.7 1.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0228) Corona_NS2A PF05213.12 ORF12099 - 0.027 13.8 0.0 0.067 12.5 0.0 1.7 1 1 0 1 1 1 0 Coronavirus NS2A protein EST1 PF10374.9 ORF12099 - 0.059 14.0 0.8 5.8 7.6 0.1 2.1 2 0 0 2 2 2 0 Telomerase activating protein Est1 Oxygenase-NA PF09859.9 ORF12099 - 0.08 12.5 0.0 0.14 11.7 0.0 1.5 1 1 0 1 1 1 0 Oxygenase, catalysing oxidative methylation of damaged DNA tRNA_edit PF04073.15 ORF11759 - 4.1e-18 65.6 0.1 4.5e-18 65.5 0.1 1.0 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain DUF3634 PF12321.8 ORF11739 - 0.088 13.2 0.0 4.7 7.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3634) Fer2_2 PF01799.20 ORF11689 - 0.00016 21.6 0.4 0.00022 21.2 0.4 1.3 1 0 0 1 1 1 1 [2Fe-2S] binding domain Ras PF00071.22 ORF112096 - 4.9e-23 81.5 0.8 5.3e-23 81.4 0.8 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF112096 - 0.0092 16.2 0.2 0.02 15.1 0.1 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase MORN PF02493.20 ORF111729 - 1.2e-13 50.1 10.8 0.00017 21.3 0.3 4.0 4 0 0 4 4 4 3 MORN repeat 53-BP1_Tudor PF09038.10 ORF111729 - 0.079 12.9 1.5 0.15 12.0 1.5 1.5 1 1 0 1 1 1 0 Tumour suppressor p53-binding protein-1 Tudor Sec23_trunk PF04811.15 ORF11125 - 0.27 10.8 0.0 0.3 10.6 0.0 1.0 1 0 0 1 1 1 0 Sec23/Sec24 trunk domain Pex2_Pex12 PF04757.14 ORF11122 - 0.033 13.8 0.0 0.06 12.9 0.0 1.4 1 1 0 1 1 1 0 Pex2 / Pex12 amino terminal region SecIII_SopE_N PF05364.14 ORF111211 - 3.1 7.9 6.8 0.94 9.6 0.2 2.5 1 1 1 2 2 2 0 Salmonella type III secretion SopE effector N-terminus PetG PF02529.15 ORF111169 - 9.2e-15 54.2 0.4 1.3e-14 53.7 0.4 1.3 1 0 0 1 1 1 1 Cytochrome B6-F complex subunit 5 UPF0114 PF03350.16 ORF111169 - 0.012 15.8 0.1 0.016 15.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 FtsX PF02687.21 ORF111169 - 0.035 14.6 1.3 0.035 14.6 1.3 1.6 2 0 0 2 2 2 0 FtsX-like permease family CbiQ PF02361.16 ORF110552 - 0.28 10.8 7.4 0.32 10.6 7.4 1.0 1 0 0 1 1 1 0 Cobalt transport protein RRM_1 PF00076.22 ORF110548 - 0.0013 18.5 0.1 0.0018 18.0 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AP3D1 PF06375.11 ORF110324 - 9.8e-05 22.6 22.8 0.00011 22.5 22.8 1.1 1 0 0 1 1 1 1 AP-3 complex subunit delta-1 SR-25 PF10500.9 ORF110324 - 0.77 9.3 17.8 0.87 9.1 17.8 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4337 PF14235.6 ORF110324 - 1 9.4 13.7 1.5 9.0 13.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF3464 PF11947.8 ORF110324 - 1.5 8.6 12.3 1.6 8.5 12.3 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Tim54 PF11711.8 ORF110324 - 2.6 6.7 12.8 3 6.5 12.8 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 NEMP PF10225.9 ORF110324 - 3.2 7.3 4.0 3.6 7.2 4.0 1.1 1 0 0 1 1 1 0 NEMP family ALMT PF11744.8 ORF110324 - 3.3 6.4 13.0 3.8 6.2 13.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter FAM60A PF15396.6 ORF110324 - 4 7.4 13.9 4.8 7.1 13.9 1.0 1 0 0 1 1 1 0 Protein Family FAM60A Rtf2 PF04641.12 ORF110324 - 4.2 6.7 18.9 5.1 6.4 18.9 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger GAGA_bind PF06217.12 ORF110324 - 5 7.3 12.9 5.9 7.1 12.9 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family Cellulose_synt PF03552.14 ORF110324 - 5.8 5.3 8.6 5.6 5.3 8.6 1.0 1 0 0 1 1 1 0 Cellulose synthase Neur_chan_memb PF02932.16 ORF110324 - 7.5 6.5 10.0 7.8 6.5 10.0 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4820 PF16091.5 ORF110324 - 8 5.7 12.9 10 5.4 12.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) CENP-N PF05238.13 ORF110324 - 8.2 5.6 14.3 8.8 5.5 14.3 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like SDH_alpha PF03313.15 ORF109974 - 2.7 7.6 8.5 3 7.4 8.5 1.1 1 0 0 1 1 1 0 Serine dehydratase alpha chain CbiQ PF02361.16 ORF1086 - 0.28 10.8 7.4 0.32 10.6 7.4 1.0 1 0 0 1 1 1 0 Cobalt transport protein DUF3504 PF12012.8 ORF108437 - 0.028 14.3 0.6 0.028 14.3 0.6 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3504) DUF4612 PF15389.6 ORF107824 - 0.028 15.4 0.3 0.03 15.4 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4612) DUF4417 PF14386.6 ORF107273 - 0.065 12.8 0.0 0.065 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4417) BIRC6 PF12356.8 ORF106616 - 0.063 12.7 0.4 0.12 11.8 0.3 1.5 1 1 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 DNA_pol_delta_4 PF04081.13 ORF10609 - 8.4e-18 65.0 0.1 9.5e-18 64.8 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase delta, subunit 4 DUF3985 PF13153.6 ORF106009 - 0.17 11.9 7.6 2.1 8.4 0.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3985) DUF2721 PF11026.8 ORF106009 - 6.1 6.7 8.0 14 5.6 8.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) CbiQ PF02361.16 ORF102941 - 0.28 10.8 7.4 0.32 10.6 7.4 1.0 1 0 0 1 1 1 0 Cobalt transport protein DUF485 PF04341.12 ORF1029 - 9e-33 112.1 0.0 1e-32 111.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF485 SKG6 PF08693.10 ORF1029 - 0.0051 16.2 1.1 0.0051 16.2 1.1 1.9 2 0 0 2 2 2 1 Transmembrane alpha-helix domain MASE3 PF17159.4 ORF1029 - 0.014 15.0 0.1 0.017 14.7 0.1 1.0 1 0 0 1 1 1 0 Membrane-associated sensor domain FA_desaturase PF00487.24 ORF1029 - 0.044 13.6 0.1 0.049 13.5 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2207 PF09972.9 ORF1029 - 0.079 11.7 0.3 0.086 11.6 0.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DIM1 PF02966.16 ORF102541 - 4.4e-24 84.8 0.0 4.9e-24 84.6 0.0 1.0 1 0 0 1 1 1 1 Mitosis protein DIM1 AAA_35 PF14516.6 ORF102387 - 0.024 13.5 2.7 0.028 13.3 2.7 1.0 1 0 0 1 1 1 0 AAA-like domain SLATT_5 PF18160.1 ORF102387 - 0.1 11.9 4.8 0.12 11.6 4.8 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 UTRA PF07702.13 ORF102276 - 1.8e-21 76.5 0.0 2e-21 76.3 0.0 1.0 1 0 0 1 1 1 1 UTRA domain PreAtp-grasp PF18604.1 ORF102276 - 0.048 13.3 0.0 0.066 12.9 0.0 1.2 1 0 0 1 1 1 0 Pre ATP-grasp domain Meckelin PF09773.9 ORF102010 - 0.059 11.5 0.5 0.066 11.3 0.5 1.1 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) Metallophos_2 PF12850.7 ORF101817 - 1.7e-11 44.6 0.0 2.1e-11 44.3 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DNA_pol_delta_4 PF04081.13 ORF100932 - 8.4e-18 65.0 0.1 9.5e-18 64.8 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase delta, subunit 4 BicD PF09730.9 ORF100829 - 0.0023 16.4 0.7 0.0027 16.2 0.7 1.0 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D Fib_alpha PF08702.10 ORF100829 - 0.25 11.5 1.8 0.3 11.3 1.8 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family GSG-1 PF07803.11 NODE_55904_length_307_cov_1.397059_g47969_i0reverse_frame_1 - 0.042 13.8 0.0 0.049 13.6 0.0 1.1 1 0 0 1 1 1 0 GSG1-like protein DUF4363 PF14276.6 NODE_55900_length_307_cov_1.496324_g47965_i0reverse_frame_1 - 0.0093 16.1 0.6 0.016 15.3 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) BppU_IgG PF18667.1 NODE_55900_length_307_cov_1.496324_g47965_i0reverse_frame_1 - 0.065 13.4 0.0 0.083 13.0 0.0 1.2 1 0 0 1 1 1 0 Baseplate upper protein immunoglobulin like domain E1-E2_ATPase PF00122.20 NODE_55897_length_307_cov_1.555147_g47962_i0forward_frame_1 - 3.3e-06 26.7 0.0 3.8e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 E1-E2 ATPase Pkinase PF00069.25 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 2.9e-29 102.2 0.1 3.1e-29 102.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 6.3e-12 45.3 0.0 6.9e-12 45.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.0048 16.3 0.0 0.0054 16.1 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.023 13.6 0.1 0.026 13.5 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.042 13.5 0.0 0.049 13.2 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.062 12.6 0.1 0.091 12.1 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.1 12.1 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL APH PF01636.23 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.14 12.1 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family eIF3g PF12353.8 NODE_55886_length_307_cov_1.823529_g47951_i0reverse_frame_1 - 0.0019 18.5 2.2 0.003 18.0 2.2 1.4 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit G zf-CCHC_3 PF13917.6 NODE_55886_length_307_cov_1.823529_g47951_i0reverse_frame_1 - 0.003 17.5 2.9 0.0048 16.8 2.9 1.3 1 0 0 1 1 1 1 Zinc knuckle PsbH PF00737.20 NODE_55882_length_307_cov_1.897059_g47947_i0forward_frame_1 - 0.13 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein Neuregulin PF02158.15 NODE_55873_length_307_cov_2.198529_g47938_i0reverse_frame_1 - 0.53 9.6 1.3 0.63 9.3 1.3 1.0 1 0 0 1 1 1 0 Neuregulin intracellular region OKR_DC_1_N PF03709.15 NODE_55870_length_307_cov_2.349265_g47935_i0forward_frame_1 - 0.15 12.3 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain UspB PF10625.9 NODE_55869_length_307_cov_2.400735_g47934_i0reverse_frame_1 - 0.037 14.0 1.3 0.05 13.6 0.7 1.5 1 1 1 2 2 2 0 Universal stress protein B (UspB) PEP-utilizers_C PF02896.18 NODE_55866_length_307_cov_2.481618_g47931_i0reverse_frame_1 - 5.3e-27 94.7 0.0 5.6e-27 94.6 0.0 1.0 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain Polysacc_deac_2 PF04748.13 NODE_55866_length_307_cov_2.481618_g47931_i0reverse_frame_1 - 0.0053 16.0 0.0 0.0053 16.0 0.0 1.1 1 0 0 1 1 1 1 Divergent polysaccharide deacetylase Podoplanin PF05808.11 NODE_55865_length_307_cov_2.492647_g47930_i0forward_frame_1 - 0.038 14.1 0.0 0.045 13.9 0.0 1.1 1 0 0 1 1 1 0 Podoplanin Ion_trans PF00520.31 NODE_55865_length_307_cov_2.492647_g47930_i0forward_frame_1 - 0.098 11.9 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Ion transport protein EphA2_TM PF14575.6 NODE_55865_length_307_cov_2.492647_g47930_i0forward_frame_1 - 0.16 12.9 0.3 0.28 12.1 0.3 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain VAD1-2 PF15310.6 NODE_55862_length_307_cov_2.599265_g47927_i0reverse_frame_1 - 0.092 12.6 0.0 0.099 12.5 0.0 1.1 1 0 0 1 1 1 0 Vitamin A-deficiency (VAD) rat model signalling DUF1057 PF06342.12 NODE_55857_length_307_cov_2.841912_g47922_i0reverse_frame_1 - 0.12 11.4 0.1 0.15 11.1 0.1 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Usher PF00577.20 NODE_55852_length_307_cov_3.073529_g47917_i0forward_frame_1 - 1.3e-19 70.5 4.5 1.4e-19 70.4 4.5 1.0 1 0 0 1 1 1 1 Outer membrane usher protein ShlB PF03865.13 NODE_55852_length_307_cov_3.073529_g47917_i0forward_frame_1 - 0.0063 16.0 3.1 0.0086 15.6 2.9 1.3 1 1 0 1 1 1 1 Haemolysin secretion/activation protein ShlB/FhaC/HecB Churchill PF06573.11 NODE_55850_length_307_cov_3.209559_g47915_i0forward_frame_1 - 0.007 16.7 0.2 0.0092 16.3 0.2 1.1 1 0 0 1 1 1 1 Churchill protein Pneumo_M2 PF07380.11 NODE_55846_length_307_cov_3.830882_g47911_i0forward_frame_1 - 0.2 12.0 5.0 0.63 10.3 5.0 1.8 1 1 0 1 1 1 0 Pneumovirus M2 protein P34-Arc PF04045.14 NODE_55840_length_307_cov_53.830882_g47905_i0forward_frame_1 - 0.044 13.5 1.7 0.061 13.0 1.7 1.2 1 0 0 1 1 1 0 Arp2/3 complex, 34 kD subunit p34-Arc Uds1 PF15456.6 NODE_55840_length_307_cov_53.830882_g47905_i0forward_frame_1 - 0.48 10.6 12.1 0.31 11.2 6.0 2.0 2 0 0 2 2 2 0 Up-regulated During Septation FUSC PF04632.12 NODE_55840_length_307_cov_53.830882_g47905_i0forward_frame_1 - 1.3 7.5 3.5 1.3 7.5 3.5 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Ly49 PF08391.10 NODE_55838_length_307_cov_56.147059_g47903_i0reverse_frame_1 - 0.24 11.8 1.0 0.29 11.5 1.0 1.2 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region CLN3 PF02487.17 NODE_55838_length_307_cov_56.147059_g47903_i0reverse_frame_1 - 0.37 9.8 0.6 0.4 9.7 0.6 1.0 1 0 0 1 1 1 0 CLN3 protein TMEM101 PF15111.6 NODE_55836_length_307_cov_58.709559_g47901_i0reverse_frame_1 - 0.067 12.7 0.0 0.079 12.5 0.0 1.1 1 0 0 1 1 1 0 TMEM101 protein family RPOL_N PF14700.6 NODE_55835_length_307_cov_62.389706_g47900_i0reverse_frame_1 - 0.0015 18.0 0.5 0.0017 17.8 0.5 1.0 1 0 0 1 1 1 1 DNA-directed RNA polymerase N-terminal RseC_MucC PF04246.12 NODE_55828_length_307_cov_71.316176_g47893_i0reverse_frame_1 - 1.6 8.7 4.3 2.2 8.2 4.3 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Rod_cone_degen PF15201.6 NODE_55827_length_307_cov_72.400735_g47892_i0forward_frame_1 - 0.0022 18.1 0.3 0.0035 17.4 0.3 1.4 1 0 0 1 1 1 1 Progressive rod-cone degeneration DUF1786 PF08735.10 NODE_55822_length_307_cov_83.327206_g47887_i0reverse_frame_1 - 0.14 11.4 0.1 0.16 11.3 0.1 1.1 1 0 0 1 1 1 0 Putative pyruvate format-lyase activating enzyme (DUF1786) TssO PF17561.2 NODE_55814_length_307_cov_169.455882_g47879_i0forward_frame_1 - 0.73 9.9 4.5 0.86 9.7 4.5 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO SCIMP PF15050.6 NODE_55808_length_307_cov_314.205882_g47873_i0reverse_frame_1 - 0.069 13.6 0.0 0.071 13.6 0.0 1.2 1 0 0 1 1 1 0 SCIMP protein Thiolase_C PF02803.18 NODE_55803_length_307_cov_4807.794118_g47868_i0reverse_frame_1 - 0.12 12.0 1.0 0.18 11.5 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain UCH PF00443.29 NODE_55788_length_308_cov_1.688645_g47853_i0reverse_frame_1 - 0.0023 17.5 1.4 0.0023 17.5 1.4 1.6 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks228.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks228.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks228.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks228.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:54:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3533 PF12051.8 NODE_55781_length_308_cov_1.846154_g47846_i0reverse_frame_1 - 0.12 11.3 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) Nodulin_late PF07127.11 NODE_55780_length_308_cov_1.853480_g47845_i0reverse_frame_1 - 0.076 13.4 0.4 0.14 12.5 0.4 1.4 1 0 0 1 1 1 0 Late nodulin protein 7TM-7TMR_HD PF07698.11 NODE_55773_length_308_cov_1.956044_g47838_i0forward_frame_1 - 0.0054 16.5 6.5 0.007 16.1 6.5 1.2 1 0 0 1 1 1 1 7TM receptor with intracellular HD hydrolase DUF3810 PF12725.7 NODE_55773_length_308_cov_1.956044_g47838_i0forward_frame_1 - 2.3 7.5 6.5 2.8 7.2 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF4231 PF14015.6 NODE_55773_length_308_cov_1.956044_g47838_i0forward_frame_1 - 8.3 6.9 8.2 42 4.7 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) Tox-SGS PF15651.6 NODE_55771_length_308_cov_2.062271_g47836_i0forward_frame_1 - 0.067 13.4 0.0 0.086 13.1 0.0 1.3 1 0 0 1 1 1 0 Salivary glad secreted protein domain toxin RAG1_imp_bd PF12560.8 NODE_55762_length_308_cov_2.329670_g47827_i0reverse_frame_1 - 0.0034 17.0 1.6 0.0038 16.8 1.6 1.1 1 0 0 1 1 1 1 RAG1 importin binding Arena_nucleocap PF00843.17 NODE_55762_length_308_cov_2.329670_g47827_i0reverse_frame_1 - 0.0049 15.8 0.6 0.38 9.6 0.0 2.0 1 1 1 2 2 2 2 Arenavirus nucleocapsid N-terminal domain Ish1 PF10281.9 NODE_55762_length_308_cov_2.329670_g47827_i0reverse_frame_1 - 0.067 13.5 0.1 0.16 12.3 0.1 1.7 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein Di19_C PF14571.6 NODE_55759_length_308_cov_2.388278_g47824_i0reverse_frame_1 - 0.027 15.0 0.3 0.03 14.8 0.3 1.2 1 0 0 1 1 1 0 Stress-induced protein Di19, C-terminal Cytochrom_B559a PF00284.20 NODE_55754_length_308_cov_2.721612_g47819_i0forward_frame_1 - 3.9 7.3 12.5 14 5.6 1.7 3.4 3 0 0 3 3 3 0 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit BPD_transp_2 PF02653.16 NODE_55752_length_308_cov_2.857143_g47817_i0reverse_frame_1 - 3.6e-05 23.1 6.2 6.1e-05 22.3 5.6 1.6 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF5518 PF17647.1 NODE_55752_length_308_cov_2.857143_g47817_i0reverse_frame_1 - 0.0091 16.1 2.4 0.011 15.9 2.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5518) DUF3007 PF11460.8 NODE_55752_length_308_cov_2.857143_g47817_i0reverse_frame_1 - 0.087 13.1 0.8 0.11 12.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) DUF347 PF03988.12 NODE_55752_length_308_cov_2.857143_g47817_i0reverse_frame_1 - 3 8.1 5.2 16 5.8 5.2 2.0 1 1 0 1 1 1 0 Repeat of Unknown Function (DUF347) DUF334 PF03904.13 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.0077 15.8 5.0 0.0088 15.6 5.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF334) DUF4795 PF16043.5 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.012 15.2 5.0 0.015 15.0 5.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) Nsp1_C PF05064.13 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.013 15.3 2.3 0.014 15.2 1.1 1.7 1 1 0 1 1 1 0 Nsp1-like C-terminal region GlutR_dimer PF00745.20 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.026 14.9 1.1 0.041 14.3 0.9 1.4 1 1 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain REC1 PF18501.1 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.031 14.2 2.8 0.037 13.9 2.8 1.0 1 0 0 1 1 1 0 Alpha helical recognition lobe domain OEP PF02321.18 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.039 13.8 3.6 0.043 13.6 3.6 1.1 1 0 0 1 1 1 0 Outer membrane efflux protein DUF1863 PF08937.11 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.068 13.5 0.5 0.08 13.3 0.5 1.2 1 0 0 1 1 1 0 MTH538 TIR-like domain (DUF1863) HalX PF08663.10 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.078 13.3 0.5 0.16 12.3 0.5 1.6 1 0 0 1 1 1 0 HalX domain Nas2_N PF18265.1 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.11 12.4 1.7 0.29 11.1 0.2 2.2 2 1 0 2 2 2 0 Nas2 N_terminal domain IMUP PF15761.5 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 0.0043 17.7 3.0 0.0047 17.6 3.0 1.1 1 0 0 1 1 1 1 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 0.069 12.8 7.6 0.075 12.6 7.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 1.2 9.5 12.1 1.3 9.3 12.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Dehydrin PF00257.19 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 1.4 9.5 5.7 2.2 8.8 5.7 1.4 1 1 0 1 1 1 0 Dehydrin DUF2749 PF10907.8 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 5 7.4 13.9 0.7 10.1 8.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) FAM76 PF16046.5 NODE_55741_length_308_cov_17.930403_g47806_i0reverse_frame_1 - 0.018 14.5 3.2 0.019 14.4 3.2 1.1 1 0 0 1 1 1 0 FAM76 protein Fez1 PF06818.15 NODE_55741_length_308_cov_17.930403_g47806_i0reverse_frame_1 - 0.027 14.9 1.9 0.027 14.9 1.9 2.2 1 1 1 2 2 2 0 Fez1 TSC22 PF01166.18 NODE_55741_length_308_cov_17.930403_g47806_i0reverse_frame_1 - 0.49 10.7 8.0 1.9 8.9 0.8 3.1 2 1 2 4 4 4 0 TSC-22/dip/bun family DivIC PF04977.15 NODE_55741_length_308_cov_17.930403_g47806_i0reverse_frame_1 - 1.8 8.4 9.9 1.8 8.4 2.6 2.8 1 1 2 3 3 3 0 Septum formation initiator CorC_HlyC PF03471.17 NODE_55734_length_308_cov_50.717949_g47799_i0reverse_frame_1 - 0.0024 17.9 0.0 0.0025 17.8 0.0 1.1 1 0 0 1 1 1 1 Transporter associated domain Potex_coat PF06184.11 NODE_55731_length_308_cov_55.487179_g47796_i0forward_frame_1 - 0.025 14.2 0.0 0.027 14.0 0.0 1.4 1 1 0 1 1 1 0 Potexvirus coat protein Synthase_beta PF11421.8 NODE_55730_length_308_cov_60.443223_g47795_i0reverse_frame_1 - 5.8 7.7 10.1 15 6.4 0.6 2.2 1 1 1 2 2 2 0 ATP synthase F1 beta subunit Bacteriocin_IIc PF10439.9 NODE_55730_length_308_cov_60.443223_g47795_i0forward_frame_1 - 0.11 12.6 4.8 0.18 12.0 4.8 1.3 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide VSP PF03302.13 NODE_55723_length_308_cov_67.721612_g47788_i0reverse_frame_1 - 0.0016 17.4 6.2 0.002 17.1 6.2 1.2 1 0 0 1 1 1 1 Giardia variant-specific surface protein Lipase_chap PF03280.14 NODE_55719_length_308_cov_74.871795_g47784_i0reverse_frame_1 - 0.0029 17.6 3.5 0.0034 17.4 3.5 1.1 1 0 0 1 1 1 1 Proteobacterial lipase chaperone protein Hep_core_N PF08290.11 NODE_55713_length_308_cov_100.556777_g47778_i0reverse_frame_1 - 5.4 7.1 8.2 0.37 10.8 1.7 2.2 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger Pex2_Pex12 PF04757.14 NODE_55708_length_308_cov_158.989011_g47773_i0reverse_frame_1 - 0.015 14.9 2.3 0.016 14.8 2.3 1.1 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region ATP-synt_8 PF00895.20 NODE_55708_length_308_cov_158.989011_g47773_i0reverse_frame_1 - 0.18 12.3 3.8 0.22 12.0 2.9 1.6 1 1 0 1 1 1 0 ATP synthase protein 8 YqzE PF14038.6 NODE_55707_length_308_cov_159.252747_g47772_i0reverse_frame_1 - 0.00096 19.1 1.5 0.0015 18.5 1.5 1.2 1 0 0 1 1 1 1 YqzE-like protein PC4 PF02229.16 NODE_55698_length_308_cov_1117.018315_g47763_i0reverse_frame_1 - 4.5e-06 26.2 0.1 9.9e-06 25.1 0.1 1.6 1 0 0 1 1 1 1 Transcriptional Coactivator p15 (PC4) Pex14_N PF04695.13 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 0.077 13.6 9.1 0.095 13.4 9.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region TFB6 PF17110.5 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 0.57 9.9 7.7 0.61 9.8 7.7 1.2 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF4637 PF15470.6 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 1.5 8.5 12.5 1.8 8.3 12.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF3306 PF11748.8 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 4.2 8.3 15.2 5.1 8.0 15.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3306) DUF2052 PF09747.9 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 5.7 7.0 18.6 6.8 6.8 18.6 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) RR_TM4-6 PF06459.12 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 6.5 6.5 19.1 7.4 6.3 19.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TspO_MBR PF03073.15 NODE_55693_length_308_cov_56529.959707_g47758_i0forward_frame_1 - 0.043 13.9 2.7 0.061 13.4 2.7 1.1 1 0 0 1 1 1 0 TspO/MBR family NPBW PF15180.6 NODE_55688_length_309_cov_1.445255_g47753_i0reverse_frame_1 - 0.065 13.1 0.2 0.31 10.9 0.0 1.9 2 0 0 2 2 2 0 Neuropeptides B and W Mlf1IP PF10248.9 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_1 - 0.064 13.2 3.1 0.074 13.0 3.1 1.2 1 0 0 1 1 1 0 Myelodysplasia-myeloid leukemia factor 1-interacting protein 7TM_GPCR_Sra PF02117.16 NODE_55681_length_309_cov_1.726277_g47746_i0reverse_frame_1 - 0.0017 17.2 3.5 0.002 17.1 3.5 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Sra PHD_Oberon PF07227.11 NODE_55672_length_309_cov_2.010949_g47737_i0reverse_frame_1 - 0.15 11.9 4.2 0.2 11.6 4.2 1.2 1 0 0 1 1 1 0 PHD - plant homeodomain finger protein SpoU_methylas_C PF12105.8 NODE_55658_length_309_cov_2.934307_g47723_i0forward_frame_1 - 0.12 12.1 0.4 0.17 11.6 0.4 1.3 1 0 0 1 1 1 0 SpoU, rRNA methylase, C-terminal Fer4_17 PF13534.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 6.9e-11 42.5 0.9 8.7e-11 42.2 0.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 2.1e-08 34.5 18.2 1.7e-07 31.5 5.2 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 4e-08 33.2 1.4 5.4e-08 32.8 1.4 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 9e-05 23.0 5.7 0.00029 21.4 5.8 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.00018 21.6 4.2 0.0007 19.7 4.3 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.0032 17.6 1.9 1.7 8.9 0.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.013 15.9 7.0 0.83 10.3 1.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.042 14.8 6.4 2.7 9.0 0.1 2.2 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4 PF00037.27 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.054 13.3 13.7 0.18 11.7 0.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.18 11.9 0.5 0.18 11.9 0.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.47 11.5 17.1 0.66 11.0 1.6 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 2.1 8.6 15.1 3.8 7.8 0.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 2.7 8.6 9.1 12 6.5 0.2 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Hormone_6 PF00236.18 NODE_55655_length_309_cov_3.164234_g47720_i0forward_frame_1 - 0.096 12.7 0.3 0.14 12.2 0.3 1.2 1 0 0 1 1 1 0 Glycoprotein hormone Lamprin PF06403.11 NODE_55645_length_309_cov_5.500000_g47710_i0forward_frame_1 - 2.6 8.0 13.7 3.2 7.7 1.7 2.1 1 1 1 2 2 2 0 Lamprin CEL_III_C PF18054.1 NODE_55639_length_309_cov_45.547445_g47704_i0reverse_frame_1 - 0.0074 16.4 4.5 0.0074 16.4 4.5 1.6 2 0 0 2 2 2 1 CEL-III C-terminal ETRAMP PF09716.10 NODE_55639_length_309_cov_45.547445_g47704_i0reverse_frame_1 - 0.029 14.4 0.6 0.029 14.4 0.6 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) ADD_ATRX PF17981.1 NODE_55638_length_309_cov_48.642336_g47703_i0reverse_frame_1 - 0.093 12.6 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Cysteine Rich ADD domain TrmO PF01980.16 NODE_55627_length_309_cov_66.240876_g47692_i0reverse_frame_1 - 0.18 12.0 0.0 0.2 11.9 0.0 1.2 1 0 0 1 1 1 0 tRNA-methyltransferase O DUF1422 PF07226.11 NODE_55622_length_309_cov_77.967153_g47687_i0forward_frame_1 - 0.18 11.9 0.0 0.18 11.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1422) Anth_Ig PF05587.13 NODE_55620_length_309_cov_79.529197_g47685_i0reverse_frame_1 - 0.084 13.2 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 Anthrax receptor extracellular domain APG6_N PF17675.1 NODE_55615_length_309_cov_93.799270_g47680_i0forward_frame_1 - 0.01 16.3 4.7 0.013 16.0 4.7 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region FapA PF03961.13 NODE_55615_length_309_cov_93.799270_g47680_i0forward_frame_1 - 0.16 10.5 5.3 0.2 10.3 5.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A O-ag_pol_Wzy PF14296.6 NODE_55611_length_309_cov_111.532847_g47676_i0forward_frame_1 - 0.063 11.9 1.1 0.078 11.6 1.1 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy DUF5434 PF17502.2 NODE_55611_length_309_cov_111.532847_g47676_i0forward_frame_1 - 0.11 12.5 1.0 0.13 12.2 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5434) p450 PF00067.22 NODE_55608_length_309_cov_122.645985_g47673_i0reverse_frame_1 - 4.5e-05 22.4 0.0 5.6e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Cytochrome P450 zf-RING_4 PF14570.6 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_1 - 4.4e-07 29.6 0.0 0.37 10.6 0.0 3.1 3 0 0 3 3 3 3 RING/Ubox like zinc-binding domain DUF1922 PF09082.10 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_1 - 0.008 16.4 0.0 2.7 8.4 0.0 2.5 2 1 1 3 3 3 2 Domain of unknown function (DUF1922) mTERF PF02536.14 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 1.9e-16 59.9 0.0 2.3e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 mTERF DUF1127 PF06568.11 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.00076 19.2 0.0 1 9.2 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF1127) Inhibitor_I69 PF13734.6 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.0094 16.3 0.0 48 4.4 0.0 3.1 3 0 0 3 3 3 0 Spi protease inhibitor HTH_23 PF13384.6 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.065 13.1 0.1 5.5 6.9 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain DUF3243 PF11588.8 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.1 12.9 0.0 12 6.3 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3243) HTH_31 PF13560.6 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.14 12.6 0.0 13 6.2 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.22 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.16 12.1 0.1 31 4.7 0.1 2.8 2 0 0 2 2 2 0 Helix-turn-helix TMEM132D_C PF15706.5 NODE_55603_length_309_cov_176.372263_g47668_i0forward_frame_1 - 0.18 11.6 4.1 0.28 11.0 4.1 1.3 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term CoA_binding_3 PF13727.6 NODE_55603_length_309_cov_176.372263_g47668_i0forward_frame_1 - 0.85 9.6 3.5 1.2 9.1 3.5 1.2 1 0 0 1 1 1 0 CoA-binding domain DUF5592 PF17332.2 NODE_55603_length_309_cov_176.372263_g47668_i0forward_frame_1 - 7.2 7.2 8.7 6.1 7.5 7.0 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5592) WRC PF08879.10 NODE_55588_length_310_cov_1.214545_g47653_i0reverse_frame_2 - 0.33 10.7 3.5 12 5.7 0.1 2.2 2 0 0 2 2 2 0 WRC MFS_1 PF07690.16 NODE_55588_length_310_cov_1.214545_g47653_i0forward_frame_3 - 1.5e-11 43.8 3.6 1.6e-11 43.7 3.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Flagellar_put PF12611.8 NODE_55588_length_310_cov_1.214545_g47653_i0forward_frame_2 - 0.21 11.4 0.5 0.37 10.6 0.5 1.3 1 0 0 1 1 1 0 Putative flagellar GBP_repeat PF02526.14 NODE_55588_length_310_cov_1.214545_g47653_i0forward_frame_2 - 0.39 10.5 1.5 0.44 10.3 0.4 1.7 2 0 0 2 2 2 0 Glycophorin-binding protein TTL PF03133.15 NODE_55585_length_310_cov_1.418182_g47650_i0reverse_frame_2 - 4.8e-18 65.3 0.0 5e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_55585_length_310_cov_1.418182_g47650_i0reverse_frame_2 - 1.8e-05 24.1 0.0 1.8e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_55585_length_310_cov_1.418182_g47650_i0reverse_frame_2 - 0.11 11.7 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp LcrR PF09621.10 NODE_55585_length_310_cov_1.418182_g47650_i0forward_frame_2 - 0.12 11.8 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Type III secretion system regulator (LcrR) DUF4094 PF13334.6 NODE_55583_length_310_cov_1.432727_g47648_i0reverse_frame_3 - 0.043 14.2 3.3 0.058 13.8 3.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) Peptidase_S49_N PF08496.10 NODE_55583_length_310_cov_1.432727_g47648_i0reverse_frame_3 - 0.5 10.4 7.3 0.62 10.1 7.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF4140 PF13600.6 NODE_55583_length_310_cov_1.432727_g47648_i0reverse_frame_3 - 2.2 8.8 7.3 0.46 10.9 1.1 2.1 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Methyltransf_28 PF02636.17 NODE_55582_length_310_cov_1.447273_g47647_i0forward_frame_2 - 2e-06 27.7 0.0 2.5e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase DUF1146 PF06612.11 NODE_55582_length_310_cov_1.447273_g47647_i0forward_frame_2 - 0.028 14.5 0.8 0.057 13.5 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1146) Phage_Gp23 PF10669.9 NODE_55580_length_310_cov_1.589091_g47645_i0forward_frame_2 - 6.1 7.2 6.0 7.7 6.9 6.0 1.2 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) Transcrip_reg PF01709.20 NODE_55574_length_310_cov_1.734545_g47639_i0reverse_frame_3 - 1.8e-35 122.5 0.1 1.9e-35 122.4 0.1 1.0 1 0 0 1 1 1 1 Transcriptional regulator TFIIB PF00382.19 NODE_55574_length_310_cov_1.734545_g47639_i0reverse_frame_3 - 0.11 12.5 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Transcription factor TFIIB repeat FAINT PF04385.15 NODE_55572_length_310_cov_1.789091_g47637_i0forward_frame_3 - 0.14 12.2 1.3 0.5 10.5 0.5 1.9 2 0 0 2 2 2 0 Domain of unknown function, DUF529 Thioredoxin_16 PF18569.1 NODE_55566_length_310_cov_1.909091_g47631_i0reverse_frame_2 - 0.079 13.1 0.7 0.11 12.6 0.7 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain GATase PF00117.28 NODE_55563_length_310_cov_2.032727_g47628_i0reverse_frame_3 - 1.9e-12 47.4 0.0 2.5e-12 47.0 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 NODE_55563_length_310_cov_2.032727_g47628_i0reverse_frame_3 - 0.097 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase C26 NOA36 PF06524.12 NODE_55560_length_310_cov_2.134545_g47625_i0reverse_frame_2 - 0.15 11.3 0.1 0.17 11.2 0.1 1.1 1 0 0 1 1 1 0 NOA36 protein Lamprin PF06403.11 NODE_55559_length_310_cov_2.178182_g47624_i0forward_frame_3 - 2.8 7.9 11.2 0.76 9.7 2.7 2.2 1 1 0 2 2 2 0 Lamprin DUF3481 PF11980.8 NODE_55558_length_310_cov_2.240000_g47623_i0reverse_frame_3 - 0.056 13.2 0.2 0.48 10.1 0.1 2.0 2 0 0 2 2 2 0 C-terminal domain of neuropilin glycoprotein Speriolin_C PF15059.6 NODE_55556_length_310_cov_2.280000_g47621_i0reverse_frame_3 - 0.076 13.1 0.0 5.8 7.0 0.0 2.2 2 0 0 2 2 2 0 Speriolin C-terminus Myf5 PF12232.8 NODE_55556_length_310_cov_2.280000_g47621_i0forward_frame_3 - 0.014 16.1 0.6 1.3 9.9 0.2 2.1 2 0 0 2 2 2 0 Myogenic determination factor 5 DUF1619 PF07773.11 NODE_55552_length_310_cov_2.309091_g47617_i0reverse_frame_3 - 4e-06 27.0 4.8 4.3e-06 26.9 4.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1619) DUF4082 PF13313.6 NODE_55552_length_310_cov_2.309091_g47617_i0reverse_frame_3 - 0.0065 16.5 0.7 0.0088 16.1 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4082) AAA PF00004.29 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 1.1e-10 42.0 0.1 1.9e-10 41.2 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TIP49 PF06068.13 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.00014 21.2 0.0 0.00015 21.1 0.0 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_5 PF07728.14 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.0036 17.3 0.1 0.0054 16.7 0.1 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.0046 17.4 0.1 0.0058 17.0 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.006 16.0 0.1 0.0079 15.6 0.1 1.2 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.0062 16.3 0.4 0.0081 15.9 0.4 1.4 1 1 0 1 1 1 1 IstB-like ATP binding protein TrpBP PF02081.15 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.0067 16.2 0.0 0.01 15.7 0.0 1.2 1 0 0 1 1 1 1 Tryptophan RNA-binding attenuator protein RuvB_N PF05496.12 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.007 16.1 0.0 0.0072 16.1 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.011 16.0 0.1 0.018 15.3 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.013 15.6 0.1 0.019 15.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.029 14.4 0.0 0.042 13.9 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.032 13.7 0.4 0.045 13.2 0.4 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_17 PF13207.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.034 14.6 0.1 0.064 13.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.072 12.8 0.3 0.17 11.6 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.081 13.2 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.11 12.0 0.4 0.24 10.9 0.1 1.6 1 1 1 2 2 2 0 P-loop containing dynein motor region AAA_25 PF13481.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.14 11.7 0.1 0.16 11.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.15 11.3 0.1 0.17 11.2 0.1 1.3 1 1 0 1 1 1 0 KaiC AAA_18 PF13238.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.22 12.1 0.1 0.52 10.9 0.1 1.6 2 0 0 2 2 2 0 AAA domain Peptidase_M16 PF00675.20 NODE_55550_length_310_cov_2.450909_g47615_i0reverse_frame_3 - 1.5e-05 25.0 0.0 2.1e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Erg28 PF03694.13 NODE_55548_length_310_cov_2.516364_g47613_i0forward_frame_2 - 0.017 15.5 0.4 0.026 14.9 0.3 1.5 1 1 0 1 1 1 0 Erg28 like protein Pho86 PF11124.8 NODE_55548_length_310_cov_2.516364_g47613_i0forward_frame_2 - 0.048 13.1 1.0 0.055 12.9 1.0 1.0 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 ELO PF01151.18 NODE_55548_length_310_cov_2.516364_g47613_i0forward_frame_2 - 0.065 12.7 3.4 0.085 12.4 3.4 1.1 1 0 0 1 1 1 0 GNS1/SUR4 family DNA_methylase PF00145.17 NODE_55545_length_310_cov_2.592727_g47610_i0forward_frame_2 - 0.26 10.6 0.0 0.26 10.6 0.0 1.0 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Arabinose_Isome PF02610.15 NODE_55544_length_310_cov_2.600000_g47609_i0forward_frame_3 - 0.02 14.1 0.0 0.023 13.9 0.0 1.0 1 0 0 1 1 1 0 L-arabinose isomerase Kelch_1 PF01344.25 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 1.4e-09 37.3 0.0 1.9e-05 24.1 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 9.9e-06 25.4 0.0 0.00032 20.6 0.0 2.2 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 0.00022 21.2 0.1 0.044 13.8 0.0 2.5 2 1 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 0.00024 21.0 0.0 1 9.5 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 0.00024 21.2 0.0 0.044 14.1 0.0 2.2 1 1 1 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 0.012 15.9 0.0 0.32 11.3 0.0 2.2 2 0 0 2 2 2 0 Galactose oxidase, central domain BCCT PF02028.17 NODE_55537_length_310_cov_3.069091_g47602_i0reverse_frame_3 - 3.5e-22 78.5 2.9 3.7e-22 78.5 2.9 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DUF2867 PF11066.8 NODE_55536_length_310_cov_3.141818_g47601_i0forward_frame_3 - 3e-05 24.4 0.0 3.3e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2867) DUSP PF06337.12 NODE_55534_length_310_cov_3.443636_g47599_i0forward_frame_3 - 1.3e-09 38.5 1.0 1.7e-09 38.1 1.0 1.2 1 0 0 1 1 1 1 DUSP domain CDC73_N PF16050.5 NODE_55529_length_310_cov_3.774545_g47594_i0reverse_frame_2 - 8.1e-12 45.1 1.4 9.4e-12 44.8 1.4 1.0 1 0 0 1 1 1 1 Paf1 complex subunit CDC73 N-terminal Galanin PF01296.18 NODE_55527_length_310_cov_8.429091_g47592_i0reverse_frame_3 - 0.056 13.4 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 Galanin DUF4452 PF14618.6 NODE_55526_length_310_cov_9.327273_g47591_i0reverse_frame_3 - 0.027 14.3 1.1 0.026 14.4 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4452) FSA_C PF10479.9 NODE_55525_length_310_cov_36.229091_g47590_i0reverse_frame_3 - 0.025 12.7 0.1 0.03 12.5 0.1 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus ICAM_N PF03921.14 NODE_55525_length_310_cov_36.229091_g47590_i0forward_frame_2 - 0.04 13.6 0.4 0.049 13.3 0.4 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain DUF4431 PF14485.6 NODE_55523_length_310_cov_41.523636_g47588_i0reverse_frame_2 - 0.19 11.5 0.0 0.3 10.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4431) Cadherin_C_2 PF16492.5 NODE_55521_length_310_cov_43.843636_g47586_i0reverse_frame_2 - 0.04 14.7 0.8 0.04 14.7 0.8 2.1 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal zf_C2H2_10 PF18414.1 NODE_55518_length_310_cov_50.712727_g47583_i0reverse_frame_2 - 0.17 11.5 0.0 0.35 10.5 0.0 1.5 1 0 0 1 1 1 0 C2H2 type zinc-finger DUF2816 PF10992.8 NODE_55518_length_310_cov_50.712727_g47583_i0forward_frame_2 - 0.014 15.2 0.1 0.025 14.5 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2816) TsaE PF02367.17 NODE_55518_length_310_cov_50.712727_g47583_i0forward_frame_2 - 0.094 12.7 0.2 0.14 12.2 0.2 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE CM2 PF03021.14 NODE_55517_length_310_cov_51.501818_g47582_i0forward_frame_3 - 0.068 13.0 0.0 0.081 12.7 0.0 1.2 1 0 0 1 1 1 0 Influenza C virus M2 protein Borrelia_rep PF03183.13 NODE_55514_length_310_cov_59.567273_g47579_i0reverse_frame_2 - 0.071 13.1 0.8 0.14 12.2 0.8 1.4 1 0 0 1 1 1 0 Borrelia repeat protein DUF4882 PF16223.5 NODE_55506_length_310_cov_69.640000_g47571_i0reverse_frame_3 - 0.027 13.7 2.7 0.029 13.6 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4882) CaKB PF03185.15 NODE_55503_length_310_cov_72.189091_g47568_i0reverse_frame_2 - 0.016 14.9 0.4 0.02 14.6 0.4 1.1 1 0 0 1 1 1 0 Calcium-activated potassium channel, beta subunit CBM_14 PF01607.24 NODE_55503_length_310_cov_72.189091_g47568_i0forward_frame_3 - 0.021 15.0 1.1 0.021 15.0 1.1 2.5 2 1 0 2 2 2 0 Chitin binding Peritrophin-A domain Methyltransf_12 PF08242.12 NODE_55502_length_310_cov_73.403636_g47567_i0reverse_frame_2 - 4.8e-06 27.2 0.0 6e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_55502_length_310_cov_73.403636_g47567_i0reverse_frame_2 - 0.0017 19.0 0.0 0.0019 18.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_55502_length_310_cov_73.403636_g47567_i0reverse_frame_2 - 0.0079 16.0 0.0 0.0091 15.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_55502_length_310_cov_73.403636_g47567_i0reverse_frame_2 - 0.032 14.9 0.1 0.039 14.6 0.1 1.1 1 0 0 1 1 1 0 Methyltransferase domain Antimicrobial_2 PF08023.12 NODE_55501_length_310_cov_79.003636_g47566_i0forward_frame_2 - 0.09 13.3 0.9 0.15 12.6 0.9 1.3 1 0 0 1 1 1 0 Frog antimicrobial peptide G10 PF01125.17 NODE_55498_length_310_cov_83.080000_g47563_i0forward_frame_3 - 0.024 14.4 0.3 0.03 14.1 0.3 1.2 1 0 0 1 1 1 0 G10 protein ScdA_N PF04405.14 NODE_55498_length_310_cov_83.080000_g47563_i0forward_frame_2 - 0.2 11.3 0.2 0.33 10.6 0.2 1.3 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) FBPase_glpX PF03320.13 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_3 - 0.23 10.3 0.1 0.27 10.0 0.1 1.0 1 0 0 1 1 1 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Histone_H2A_C PF16211.5 NODE_55490_length_310_cov_100.680000_g47555_i0forward_frame_3 - 0.17 11.7 2.8 0.24 11.2 2.8 1.2 1 0 0 1 1 1 0 C-terminus of histone H2A DUF5081 PF16887.5 NODE_55489_length_310_cov_101.978182_g47554_i0forward_frame_3 - 0.061 12.4 1.0 0.067 12.2 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5081) Multi_Drug_Res PF00893.19 NODE_55486_length_310_cov_122.323636_g47551_i0reverse_frame_3 - 0.034 14.8 0.1 0.038 14.7 0.1 1.2 1 0 0 1 1 1 0 Small Multidrug Resistance protein SpoU_methylase PF00588.19 NODE_55484_length_310_cov_124.905455_g47549_i0reverse_frame_2 - 7.2e-18 65.1 0.0 8.3e-18 64.9 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family DUF1077 PF06417.12 NODE_55482_length_310_cov_136.574545_g47547_i0reverse_frame_3 - 0.057 13.4 2.0 0.062 13.3 0.8 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1077) PPR_2 PF13041.6 NODE_55481_length_310_cov_157.680000_g47546_i0forward_frame_2 - 0.014 15.6 0.0 0.62 10.3 0.0 2.1 1 1 1 2 2 2 0 PPR repeat family zf-C2H2_11 PF16622.5 NODE_55480_length_310_cov_159.992727_g47545_i0reverse_frame_2 - 0.0028 17.4 0.1 0.0028 17.4 0.1 1.5 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2 PF00096.26 NODE_55480_length_310_cov_159.992727_g47545_i0reverse_frame_2 - 0.017 15.5 0.1 0.055 14.0 0.1 1.9 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_55480_length_310_cov_159.992727_g47545_i0reverse_frame_2 - 0.023 15.5 0.1 0.054 14.3 0.1 1.7 1 0 0 1 1 1 0 C2H2-type zinc finger zf_Hakai PF18408.1 NODE_55480_length_310_cov_159.992727_g47545_i0reverse_frame_2 - 0.027 14.2 0.0 0.066 12.9 0.0 1.7 1 0 0 1 1 1 0 C2H2 Hakai zinc finger domain zf-met PF12874.7 NODE_55480_length_310_cov_159.992727_g47545_i0reverse_frame_2 - 0.089 13.2 0.1 0.21 12.0 0.1 1.7 1 0 0 1 1 1 0 Zinc-finger of C2H2 type DUF5110 PF17137.4 NODE_55477_length_310_cov_341.963636_g47542_i0reverse_frame_3 - 0.026 14.8 1.1 0.05 13.9 1.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5110) UPF0154 PF03672.13 NODE_55476_length_310_cov_416.869091_g47541_i0forward_frame_2 - 0.027 14.5 1.7 0.064 13.3 1.7 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) E2F_TDP PF02319.20 NODE_55465_length_311_cov_1.438406_g47530_i0forward_frame_2 - 2.4e-09 37.1 1.2 2.9e-09 36.8 1.2 1.2 1 0 0 1 1 1 1 E2F/DP family winged-helix DNA-binding domain RHD_DNA_bind PF00554.22 NODE_55463_length_311_cov_1.547101_g47528_i0forward_frame_2 - 0.022 14.7 0.2 0.025 14.5 0.2 1.0 1 0 0 1 1 1 0 Rel homology DNA-binding domain DUF4955 PF16315.5 NODE_55463_length_311_cov_1.547101_g47528_i0forward_frame_2 - 0.047 13.9 0.0 0.056 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4955) Vps53_N PF04100.12 NODE_55460_length_311_cov_1.844203_g47525_i0reverse_frame_3 - 0.00018 20.6 0.0 0.0003 19.9 0.0 1.3 1 0 0 1 1 1 1 Vps53-like, N-terminal COG7 PF10191.9 NODE_55460_length_311_cov_1.844203_g47525_i0reverse_frame_3 - 0.0039 15.5 0.3 0.0043 15.4 0.3 1.0 1 0 0 1 1 1 1 Golgi complex component 7 (COG7) Melibiase_2 PF16499.5 NODE_55460_length_311_cov_1.844203_g47525_i0reverse_frame_3 - 0.12 11.5 0.0 0.14 11.3 0.0 1.0 1 0 0 1 1 1 0 Alpha galactosidase A Suv3_N PF18114.1 NODE_55460_length_311_cov_1.844203_g47525_i0reverse_frame_2 - 0.091 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Suv3 helical N-terminal domain LisH_2 PF16045.5 NODE_55456_length_311_cov_1.902174_g47521_i0forward_frame_3 - 0.091 11.8 0.1 0.14 11.2 0.1 1.2 1 0 0 1 1 1 0 LisH SMN PF06003.12 NODE_55453_length_311_cov_1.963768_g47518_i0reverse_frame_3 - 0.84 8.8 5.6 0.94 8.7 5.6 1.2 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) MAP2_projctn PF08377.10 NODE_55451_length_311_cov_1.978261_g47516_i0forward_frame_3 - 0.2 9.7 0.0 0.23 9.5 0.0 1.0 1 0 0 1 1 1 0 MAP2/Tau projection domain p450 PF00067.22 NODE_55450_length_311_cov_1.992754_g47515_i0reverse_frame_3 - 2.6e-11 42.9 0.0 3.1e-11 42.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 EcoRI PF02963.16 NODE_55450_length_311_cov_1.992754_g47515_i0reverse_frame_3 - 0.061 12.3 0.1 0.07 12.1 0.1 1.1 1 0 0 1 1 1 0 Restriction endonuclease EcoRI RNA_pol_I_A49 PF06870.12 NODE_55447_length_311_cov_2.050725_g47512_i0reverse_frame_2 - 1e-05 24.6 1.8 1e-05 24.6 1.8 1.0 1 0 0 1 1 1 1 A49-like RNA polymerase I associated factor NgoMIV_restric PF09015.10 NODE_55447_length_311_cov_2.050725_g47512_i0reverse_frame_2 - 0.1 11.7 0.1 0.12 11.4 0.1 1.1 1 0 0 1 1 1 0 NgoMIV restriction enzyme RCC1 PF00415.18 NODE_55442_length_311_cov_2.177536_g47507_i0reverse_frame_2 - 1.6e-19 70.2 0.6 1.7e-15 57.4 0.1 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_55442_length_311_cov_2.177536_g47507_i0reverse_frame_2 - 1.1e-10 41.0 1.5 1.4e-06 27.9 0.3 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF1433 PF07252.11 NODE_55441_length_311_cov_2.210145_g47506_i0reverse_frame_2 - 0.093 13.0 0.3 0.15 12.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1433) Cnl2_NKP2 PF09447.10 NODE_55439_length_311_cov_2.297101_g47504_i0reverse_frame_2 - 0.041 14.0 0.3 0.089 13.0 0.2 1.7 1 1 0 1 1 1 0 Cnl2/NKP2 family protein Nuc_N PF14448.6 NODE_55439_length_311_cov_2.297101_g47504_i0reverse_frame_2 - 0.078 12.8 7.1 1.1 9.1 1.0 2.3 1 1 1 2 2 2 0 Nuclease N terminal DUF3938 PF13074.6 NODE_55437_length_311_cov_2.307971_g47502_i0forward_frame_3 - 0.077 13.2 1.4 0.095 13.0 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3938) PBP_sp32 PF07222.12 NODE_55436_length_311_cov_2.333333_g47501_i0forward_frame_3 - 0.088 12.2 0.1 0.091 12.2 0.1 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 SPOC PF07744.13 NODE_55433_length_311_cov_2.460145_g47498_i0reverse_frame_2 - 0.041 13.8 0.0 0.048 13.6 0.0 1.1 1 0 0 1 1 1 0 SPOC domain DUF3989 PF13150.6 NODE_55429_length_311_cov_2.695652_g47494_i0reverse_frame_2 - 0.21 11.4 2.7 0.29 10.9 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) Gemini_mov PF01708.16 NODE_55429_length_311_cov_2.695652_g47494_i0reverse_frame_2 - 0.41 10.4 2.0 0.78 9.5 2.0 1.4 1 0 0 1 1 1 0 Geminivirus putative movement protein RVT_1 PF00078.27 NODE_55428_length_311_cov_2.735507_g47493_i0reverse_frame_3 - 0.00055 19.5 0.0 0.0006 19.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) KAAG1 PF15354.6 NODE_55428_length_311_cov_2.735507_g47493_i0reverse_frame_2 - 1.1 9.8 9.3 1.2 9.7 8.4 1.5 1 1 0 1 1 1 0 Kidney-associated antigen 1 Glyco_transf_34 PF05637.12 NODE_55427_length_311_cov_2.782609_g47492_i0reverse_frame_3 - 0.016 15.0 0.0 0.02 14.6 0.0 1.2 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family DUF2892 PF11127.8 NODE_55427_length_311_cov_2.782609_g47492_i0forward_frame_3 - 0.53 10.3 5.1 1.3 9.2 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) DUF4807 PF16065.5 NODE_55427_length_311_cov_2.782609_g47492_i0forward_frame_2 - 0.12 12.0 0.1 0.16 11.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4807) FGF-BP1 PF06473.12 NODE_55426_length_311_cov_2.876812_g47491_i0forward_frame_2 - 0.0028 17.5 1.1 0.0031 17.4 1.1 1.1 1 0 0 1 1 1 1 FGF binding protein 1 (FGF-BP1) Thx PF17070.5 NODE_55425_length_311_cov_2.923913_g47490_i0forward_frame_3 - 0.011 15.8 0.6 0.028 14.5 0.6 1.7 1 0 0 1 1 1 0 30S ribosomal protein Thx DUF986 PF06173.12 NODE_55423_length_311_cov_3.068841_g47488_i0forward_frame_3 - 4.8e-44 150.0 1.2 5.2e-44 149.9 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF986) Proton_antipo_M PF00361.20 NODE_55420_length_311_cov_3.355072_g47485_i0reverse_frame_3 - 2.7e-18 66.2 1.3 3.1e-18 66.0 1.3 1.0 1 0 0 1 1 1 1 Proton-conducting membrane transporter DUF3623 PF12291.8 NODE_55420_length_311_cov_3.355072_g47485_i0reverse_frame_3 - 0.0092 15.2 0.1 0.011 15.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3623) Sdh_cyt PF01127.22 NODE_55420_length_311_cov_3.355072_g47485_i0reverse_frame_3 - 0.038 14.0 1.0 0.05 13.6 1.0 1.1 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF2208 PF09973.9 NODE_55420_length_311_cov_3.355072_g47485_i0reverse_frame_3 - 0.1 12.2 1.1 0.12 12.0 1.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) Phage_Nu1 PF07471.12 NODE_55418_length_311_cov_3.764493_g47483_i0forward_frame_3 - 1.2e-52 178.0 1.5 1.3e-52 177.9 1.5 1.0 1 0 0 1 1 1 1 Phage DNA packaging protein Nu1 Put_DNA-bind_N PF06971.13 NODE_55410_length_311_cov_55.797101_g47475_i0reverse_frame_2 - 0.044 13.8 0.0 0.066 13.2 0.0 1.2 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus zf-CCCH_4 PF18044.1 NODE_55408_length_311_cov_60.155797_g47473_i0reverse_frame_3 - 2.9e-06 27.0 5.4 4e-06 26.5 5.4 1.2 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH PF00642.24 NODE_55408_length_311_cov_60.155797_g47473_i0reverse_frame_3 - 2.5e-05 24.1 4.9 4.1e-05 23.4 4.9 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_55408_length_311_cov_60.155797_g47473_i0reverse_frame_3 - 0.00057 19.9 7.2 0.001 19.1 7.2 1.4 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_2 PF14608.6 NODE_55408_length_311_cov_60.155797_g47473_i0reverse_frame_3 - 0.0074 16.7 3.8 0.012 16.1 3.8 1.3 1 0 0 1 1 1 1 RNA-binding, Nab2-type zinc finger TraI_2 PF07514.11 NODE_55408_length_311_cov_60.155797_g47473_i0reverse_frame_3 - 0.03 13.3 0.1 0.036 13.0 0.1 1.1 1 0 0 1 1 1 0 Putative helicase RSRP PF17069.5 NODE_55408_length_311_cov_60.155797_g47473_i0reverse_frame_2 - 0.084 12.4 5.5 0.094 12.3 5.5 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 DRY_EERY PF09750.9 NODE_55405_length_311_cov_66.293478_g47470_i0forward_frame_3 - 0.16 12.3 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Alternative splicing regulator MLANA PF14991.6 NODE_55405_length_311_cov_66.293478_g47470_i0forward_frame_2 - 0.051 13.9 1.4 0.056 13.7 0.4 1.6 1 1 1 2 2 2 0 Protein melan-A ACT_4 PF13291.6 NODE_55404_length_311_cov_70.438406_g47469_i0reverse_frame_2 - 0.092 13.3 1.4 0.15 12.6 1.4 1.3 1 0 0 1 1 1 0 ACT domain AHD PF17793.1 NODE_55403_length_311_cov_70.681159_g47468_i0forward_frame_3 - 0.052 13.4 0.3 0.089 12.6 0.3 1.3 1 0 0 1 1 1 0 ANC1 homology domain (AHD) DUF1013 PF06242.11 NODE_55403_length_311_cov_70.681159_g47468_i0forward_frame_2 - 0.057 13.5 0.4 0.076 13.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1013) Ank_2 PF12796.7 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 6.7e-24 84.3 0.7 9.1e-13 48.6 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 8.1e-18 64.3 0.1 8.7e-09 35.5 0.0 2.5 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 1.1e-16 60.4 0.1 2.1e-05 24.8 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 2.2e-12 47.2 0.1 1.1e-08 35.5 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 5e-10 38.8 0.0 0.0055 17.1 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat YlzJ PF14035.6 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 0.00029 21.0 0.0 2.7 8.3 0.0 3.1 2 1 1 3 3 3 2 YlzJ-like protein STG PF15809.5 NODE_55396_length_311_cov_84.876812_g47461_i0forward_frame_2 - 0.11 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Simian taste bud-specific gene product family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks229.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks229.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks229.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks229.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RRM_1 PF00076.22 ORF26129 - 2.7e-35 120.0 0.0 2.2e-06 27.4 0.0 8.2 8 1 0 8 8 8 7 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF26129 - 7.8e-09 35.5 0.0 1.3 9.1 0.0 6.6 6 1 1 7 7 7 3 RNA binding motif Limkain-b1 PF11608.8 ORF26129 - 6e-08 32.6 0.3 0.35 11.0 0.0 4.3 3 1 1 4 4 4 4 Limkain b1 RRM_5 PF13893.6 ORF26129 - 0.2 11.3 0.0 13 5.4 0.0 3.2 3 0 0 3 3 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Melittin PF01372.17 ORF26129 - 0.21 11.6 0.9 39 4.5 0.0 3.2 3 0 0 3 3 3 0 Melittin PSRP-3_Ycf65 PF04839.13 ORF26129 - 4.9 7.4 5.7 3.4 7.9 0.1 3.3 5 0 0 5 5 5 0 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) FtsX PF02687.21 ORF25272 - 1.9e-05 25.0 23.3 8.8e-05 22.9 0.3 3.7 3 1 0 3 3 3 2 FtsX-like permease family TruD PF01142.18 ORF25272 - 0.13 11.1 0.1 0.19 10.5 0.1 1.2 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) Nuc_sug_transp PF04142.15 ORF18461 - 5.9e-10 38.8 2.0 1.1e-09 37.9 2.0 1.4 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF18461 - 1e-07 32.2 27.1 5.8e-07 29.8 3.3 3.5 3 1 0 3 3 3 2 EamA-like transporter family SLC35F PF06027.12 ORF18461 - 0.00017 21.3 20.9 0.0025 17.4 20.9 2.1 1 1 0 1 1 1 1 Solute carrier family 35 CRT-like PF08627.10 ORF18461 - 0.00028 20.0 8.5 0.00028 20.0 8.5 2.7 2 1 1 3 3 3 2 CRT-like, chloroquine-resistance transporter-like UAA PF08449.11 ORF18461 - 0.01 15.1 17.1 0.022 14.0 4.8 2.5 1 1 2 3 3 3 0 UAA transporter family DMT_6 PF04342.12 ORF18461 - 0.89 9.8 8.0 5.6 7.2 0.5 2.6 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) PrgI PF12666.7 ORF18461 - 5.8 7.7 7.4 17 6.2 1.9 3.4 2 1 1 3 3 3 0 PrgI family protein PCI PF01399.27 ORF140 - 8.4e-17 61.6 3.4 4.4e-16 59.3 1.8 2.8 3 0 0 3 3 3 1 PCI domain CSN8_PSD8_EIF3K PF10075.9 ORF140 - 0.00019 21.4 0.9 0.00036 20.5 0.9 1.4 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family TPR_7 PF13176.6 ORF140 - 0.0071 16.3 0.3 0.27 11.4 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF140 - 0.027 14.7 1.1 0.12 12.7 0.0 2.6 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2225 PF09986.9 ORF140 - 0.18 11.5 7.9 0.21 11.3 0.4 2.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) SPACA9 PF15120.6 ORF140 - 0.29 10.9 5.4 0.61 9.9 1.4 3.0 2 1 1 3 3 3 0 Sperm acrosome-associated protein 9 PLDc_2 PF13091.6 ORF12841 - 3.9e-10 39.7 0.0 6.5e-10 39.0 0.0 1.4 1 0 0 1 1 1 1 PLD-like domain TMEM141 PF15110.6 ORF12841 - 0.026 15.1 0.1 0.059 13.9 0.1 1.6 1 0 0 1 1 1 0 TMEM141 protein family RhoGAP PF00620.27 ORF111265 - 3.1 7.6 5.6 2.6 7.8 0.9 2.7 3 0 0 3 3 3 0 RhoGAP domain LPAM_1 PF08139.12 ORF107119 - 0.27 11.8 1.0 0.44 11.1 1.0 1.4 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site RhoGAP PF00620.27 ORF104074 - 3.1 7.6 5.6 2.6 7.8 0.9 2.7 3 0 0 3 3 3 0 RhoGAP domain Ank_2 PF12796.7 ORF86054 - 2.8e-56 188.1 0.9 3.4e-16 59.6 0.1 4.7 2 2 1 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF86054 - 1e-41 140.8 2.7 1.3e-07 32.0 0.0 8.1 4 2 4 8 8 8 8 Ankyrin repeats (many copies) Ank PF00023.30 ORF86054 - 3.7e-38 128.3 3.3 0.00042 20.6 0.1 10.4 9 1 1 10 10 10 9 Ankyrin repeat Ank_5 PF13857.6 ORF86054 - 3.3e-34 116.5 7.5 2.7e-07 30.7 0.0 8.7 3 3 6 9 9 9 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF86054 - 6.5e-29 96.8 0.2 0.0022 18.3 0.0 9.9 10 0 0 10 10 10 6 Ankyrin repeat YlzJ PF14035.6 ORF86054 - 1.6e-05 25.0 0.0 21 5.4 0.0 6.4 6 2 2 8 8 8 2 YlzJ-like protein Abhydrolase_1 PF00561.20 ORF85782 - 2.6e-16 60.1 0.6 4.9e-12 46.0 0.3 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF85782 - 8.9e-16 57.2 0.0 1.8e-15 56.2 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF85782 - 3.3e-07 29.8 0.0 0.0015 17.8 0.0 2.3 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF85782 - 0.019 14.4 0.4 0.094 12.2 0.1 2.3 3 0 0 3 3 3 0 Prolyl oligopeptidase family FSH1 PF03959.13 ORF85782 - 0.083 12.5 0.0 0.32 10.6 0.0 1.9 3 0 0 3 3 3 0 Serine hydrolase (FSH1) RhoGAP PF00620.27 ORF73991 - 0.62 9.9 4.3 2.5 7.9 0.9 2.6 2 0 0 2 2 2 0 RhoGAP domain Amidohydro_1 PF01979.20 ORF61005 - 3.8e-84 282.9 0.0 4.4e-84 282.7 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF61005 - 3.2e-17 63.2 0.0 6.7e-12 45.6 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family Peripla_BP_1 PF00532.21 ORF61005 - 0.049 13.1 0.0 0.077 12.4 0.0 1.3 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family DDE_Tnp_1_7 PF13843.6 ORF57213 - 0.044 13.1 0.1 0.069 12.4 0.1 1.2 1 0 0 1 1 1 0 Transposase IS4 DUF3584 PF12128.8 ORF57213 - 0.42 8.1 14.5 0.17 9.4 9.8 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 ORF57213 - 0.66 9.8 21.8 0.21 11.5 13.6 2.7 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain BshC PF10079.9 ORF57213 - 1.5 7.5 8.4 9.1 4.9 0.1 2.4 2 1 0 2 2 2 0 Bacillithiol biosynthesis BshC Fez1 PF06818.15 ORF57213 - 4.5 7.7 11.1 9.1 6.7 0.0 2.5 2 1 0 2 2 2 0 Fez1 CC2-LZ PF16516.5 ORF57213 - 6 7.3 9.9 1.8 9.0 0.6 3.5 2 2 2 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Exonuc_VII_L PF02601.15 ORF57213 - 6.2 6.3 12.5 50 3.3 12.5 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit FliG_M PF14841.6 ORF31226 - 0.16 12.2 4.9 25 5.2 0.0 3.8 4 0 0 4 4 4 0 FliG middle domain DUF2795 PF11387.8 ORF31226 - 7.6 6.8 6.8 1.3 9.3 0.2 3.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2795) Pkinase PF00069.25 ORF30370 - 2.2e-45 155.1 0.0 3.2e-45 154.6 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30370 - 2.8e-22 79.3 0.0 3.8e-22 78.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF30370 - 2.1e-08 33.8 0.0 3e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF30370 - 6.2e-06 25.7 0.1 1.4e-05 24.5 0.0 1.6 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF30370 - 0.00038 19.4 0.0 0.00085 18.2 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF30370 - 0.0036 17.3 0.0 0.0089 16.0 0.0 1.6 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF30370 - 0.032 13.2 0.0 0.049 12.6 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain DUF3237 PF11578.8 ORF30370 - 0.14 12.0 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) Peptidase_C14 PF00656.22 ORF19441 - 8.3e-52 176.6 0.0 1.4e-51 175.8 0.0 1.3 1 1 0 1 1 1 1 Caspase domain Raptor_N PF14538.6 ORF19441 - 0.023 14.6 0.4 5.2 7.0 0.0 2.8 2 0 0 2 2 2 0 Raptor N-terminal CASPase like domain RRM_1 PF00076.22 ORF110399 - 4.7e-20 71.2 0.6 9e-15 54.3 0.0 4.4 3 2 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF110399 - 1.5e-05 25.0 0.0 8e-05 22.7 0.0 2.2 2 0 0 2 2 2 1 RNA recognition motif Tower PF09121.10 ORF105436 - 0.65 10.2 6.0 2 8.7 6.0 1.8 1 0 0 1 1 1 0 Tower CDC27 PF09507.10 ORF105436 - 0.86 8.9 38.1 0.28 10.5 26.6 2.2 2 0 0 2 2 2 0 DNA polymerase subunit Cdc27 Atg14 PF10186.9 ORF103604 - 0.0068 15.5 4.7 0.011 14.8 4.7 1.3 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 PsbQ PF05757.11 ORF103604 - 0.014 15.1 0.2 0.024 14.4 0.2 1.3 1 0 0 1 1 1 0 Oxygen evolving enhancer protein 3 (PsbQ) MAD PF05557.13 ORF103604 - 0.047 12.1 7.1 0.081 11.3 7.1 1.3 1 0 0 1 1 1 0 Mitotic checkpoint protein Exonuc_VII_L PF02601.15 ORF103604 - 0.051 13.1 3.1 0.098 12.2 3.1 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit FAM76 PF16046.5 ORF103604 - 0.058 12.7 1.6 0.073 12.4 1.6 1.2 1 0 0 1 1 1 0 FAM76 protein Spc7 PF08317.11 ORF103604 - 0.14 11.0 9.7 0.22 10.4 9.7 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein YabA PF06156.13 ORF103604 - 0.19 12.4 4.5 0.8 10.4 4.1 2.1 2 0 0 2 2 2 0 Initiation control protein YabA Syntaxin_2 PF14523.6 ORF103604 - 0.21 11.9 3.8 0.62 10.5 3.8 1.7 1 0 0 1 1 1 0 Syntaxin-like protein DUF1664 PF07889.12 ORF103604 - 0.25 11.4 4.1 0.48 10.5 4.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) BRE1 PF08647.11 ORF103604 - 0.54 10.4 8.6 0.34 11.0 5.5 2.0 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase UPF0242 PF06785.11 ORF103604 - 2.2 8.4 8.8 4.1 7.5 8.8 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2818 PF10993.8 ORF98719 - 0.069 13.7 1.8 1.8 9.2 0.1 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2818) LPAM_1 PF08139.12 ORF96707 - 0.091 13.3 1.0 0.12 12.9 1.0 1.2 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF4449 PF14613.6 ORF96707 - 0.24 11.5 0.0 0.38 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) DDE_Tnp_1_7 PF13843.6 ORF86356 - 0.044 13.1 0.1 0.069 12.4 0.1 1.2 1 0 0 1 1 1 0 Transposase IS4 DUF3584 PF12128.8 ORF86356 - 0.42 8.1 14.5 0.17 9.4 9.8 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 ORF86356 - 0.69 9.8 21.9 0.18 11.7 13.7 2.7 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain BshC PF10079.9 ORF86356 - 1.4 7.5 8.4 9.1 4.9 0.1 2.4 2 1 0 2 2 2 0 Bacillithiol biosynthesis BshC Fez1 PF06818.15 ORF86356 - 4.4 7.7 11.1 9.1 6.7 0.0 2.5 2 1 0 2 2 2 0 Fez1 CC2-LZ PF16516.5 ORF86356 - 6.2 7.2 9.9 1.8 9.0 0.6 3.5 2 2 2 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Exonuc_VII_L PF02601.15 ORF86356 - 6.4 6.2 12.5 54 3.2 12.6 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit HEAT_2 PF13646.6 ORF79808 - 5e-26 90.9 32.4 4.4e-12 46.2 7.4 5.6 2 2 3 6 6 6 4 HEAT repeats HEAT PF02985.22 ORF79808 - 6e-18 63.4 35.0 0.00051 20.1 0.3 10.7 11 0 0 11 11 11 6 HEAT repeat HEAT_EZ PF13513.6 ORF79808 - 1.5e-06 28.5 34.3 0.062 13.8 0.5 8.5 6 3 2 8 8 8 3 HEAT-like repeat Cnd1 PF12717.7 ORF79808 - 4.4e-05 23.6 3.3 0.51 10.4 0.2 4.1 1 1 3 4 4 4 2 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 ORF79808 - 0.00012 20.8 12.3 0.0045 15.6 2.7 3.7 1 1 1 3 3 3 2 Adaptin N terminal region Arm PF00514.23 ORF79808 - 0.00023 21.1 15.9 0.37 10.9 0.3 6.9 7 0 0 7 7 7 1 Armadillo/beta-catenin-like repeat HEAT_PBS PF03130.16 ORF79808 - 0.0057 17.2 28.3 3.9 8.4 1.9 8.0 8 0 0 8 8 8 2 PBS lyase HEAT-like repeat NopRA1 PF16201.5 ORF79808 - 0.043 13.4 9.9 2 7.9 0.1 4.9 2 2 4 6 6 6 0 Nucleolar pre-ribosomal-associated protein 1 EDR1 PF14381.6 ORF79808 - 0.13 11.9 0.2 1.1 8.9 0.0 2.1 1 1 0 2 2 2 0 Ethylene-responsive protein kinase Le-CTR1 Cohesin_HEAT PF12765.7 ORF79808 - 0.16 12.3 6.8 4.1 7.8 0.8 4.1 4 0 0 4 4 4 0 HEAT repeat associated with sister chromatid cohesion DUF2019 PF09450.10 ORF79808 - 9.7 6.2 7.1 6.3 6.8 0.0 3.6 3 1 1 4 4 4 0 Domain of unknown function (DUF2019) eRF1_2 PF03464.15 ORF77519 - 5.5e-44 149.7 0.0 8.5e-44 149.1 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 ORF77519 - 1.7e-33 115.5 0.0 3.1e-33 114.6 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.15 ORF77519 - 5.2e-17 62.1 0.0 8e-17 61.4 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 1 acVLRF1 PF18859.1 ORF77519 - 2.9e-09 37.3 0.0 4.4e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 ORF77519 - 2.9e-09 37.3 0.0 4.8e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 NTP_transferase PF00483.23 ORF47029 - 2.9e-69 233.4 0.0 3.6e-69 233.1 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 ORF47029 - 3.6e-08 33.9 0.0 6.1e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 ORF47029 - 0.047 12.6 0.0 0.61 9.0 0.1 2.1 2 0 0 2 2 2 0 L-fucokinase Hexapep PF00132.24 ORF47029 - 0.72 9.7 2.7 4.1 7.3 0.0 2.9 2 1 1 3 3 3 0 Bacterial transferase hexapeptide (six repeats) zf-RING_2 PF13639.6 ORF41192 - 2.2e-11 43.9 7.8 5e-11 42.8 7.8 1.7 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF41192 - 1.5e-08 34.8 4.2 3.3e-08 33.7 4.2 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF41192 - 2e-08 34.0 7.4 4.8e-08 32.7 7.4 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF41192 - 6.3e-07 29.0 6.4 6.3e-07 29.0 4.6 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF41192 - 1.6e-06 27.9 4.1 2.9e-06 27.1 4.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF41192 - 1.4e-05 24.9 3.7 2.6e-05 24.0 3.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF41192 - 2.8e-05 23.9 6.3 2.8e-05 23.9 6.3 1.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF41192 - 3.5e-05 23.8 2.1 3.5e-05 23.8 2.1 1.8 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF41192 - 0.00021 20.8 4.8 0.00046 19.7 4.8 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 ORF41192 - 0.0044 17.0 3.4 0.011 15.8 3.4 1.7 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF41192 - 0.0051 16.6 5.4 0.01 15.7 5.4 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF41192 - 0.014 15.1 5.1 0.034 13.9 5.1 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain FANCL_C PF11793.8 ORF41192 - 0.027 14.6 2.2 0.065 13.4 2.2 1.7 1 0 0 1 1 1 0 FANCL C-terminal domain zf-RING-like PF08746.11 ORF41192 - 0.093 13.1 3.3 0.27 11.6 3.3 1.9 1 0 0 1 1 1 0 RING-like domain RINGv PF12906.7 ORF41192 - 0.32 11.1 6.0 0.71 10.0 6.0 1.6 1 0 0 1 1 1 0 RING-variant domain DUF2630 PF10944.8 ORF30933 - 0.02 15.3 6.3 0.65 10.5 0.4 3.8 4 0 0 4 4 4 0 Protein of unknown function (DUF2630) UDPGT PF00201.18 ORF26188 - 1.1e-12 47.6 0.2 2.4e-12 46.4 0.0 1.6 2 1 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF26188 - 1.5e-05 25.0 0.0 2.6e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain PGA2 PF07543.12 ORF24246 - 7.7 6.5 9.2 48 3.9 9.4 2.3 1 1 0 1 1 1 0 Protein trafficking PGA2 PPR_2 PF13041.6 ORF20410 - 4e-46 155.0 0.8 8.2e-13 48.3 0.0 7.2 3 1 5 8 8 8 6 PPR repeat family PPR PF01535.20 ORF20410 - 5e-37 123.6 0.1 1.4e-06 28.1 0.0 8.8 9 0 0 9 9 9 5 PPR repeat PPR_1 PF12854.7 ORF20410 - 1.4e-27 95.0 0.0 3.8e-06 26.5 0.0 6.6 6 0 0 6 6 6 5 PPR repeat PPR_3 PF13812.6 ORF20410 - 5e-26 90.6 0.0 1.2e-10 41.3 0.0 5.2 4 1 1 5 5 5 4 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF20410 - 3.5e-16 59.2 2.2 1.5e-11 44.1 0.1 2.8 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP TPR_19 PF14559.6 ORF20410 - 0.0026 18.2 9.2 2.8 8.5 0.0 5.1 4 1 3 7 7 7 3 Tetratricopeptide repeat Wzy_C_2 PF11846.8 ORF20410 - 0.0037 17.2 1.0 2.5 8.0 0.0 3.8 2 2 1 3 3 3 1 Virulence factor membrane-bound polymerase, C-terminal Clathrin PF00637.20 ORF20410 - 0.029 14.2 0.0 19 5.1 0.0 3.8 1 1 1 4 4 4 0 Region in Clathrin and VPS SelB-wing_1 PF09105.10 ORF20410 - 0.06 13.3 0.0 8.9 6.4 0.0 3.1 2 0 0 2 2 2 0 Elongation factor SelB, winged helix NusA_N PF08529.11 ORF20410 - 0.098 13.0 0.0 0.27 11.6 0.0 1.7 1 0 0 1 1 1 0 NusA N-terminal domain SesA PF17107.5 ORF20410 - 2.2 8.5 4.4 8.6 6.6 0.1 3.4 3 1 1 4 4 4 0 N-terminal domain on NACHT_NTPase and P-loop NTPases GCFC PF07842.12 ORF103675 - 0.00016 21.4 0.0 0.0023 17.6 0.0 2.6 2 1 0 2 2 2 1 GC-rich sequence DNA-binding factor-like protein UPF0147 PF03685.13 ORF103675 - 0.0032 17.5 0.6 2.1 8.4 0.2 2.6 2 0 0 2 2 2 2 Uncharacterised protein family (UPF0147) BAF1_ABF1 PF04684.13 ORF103675 - 0.0078 15.3 0.1 0.0091 15.1 0.1 1.1 1 0 0 1 1 1 1 BAF1 / ABF1 chromatin reorganising factor Calc_CGRP_IAPP PF00214.19 ORF103675 - 1.5 9.2 0.0 1.5 9.2 0.0 2.6 3 0 0 3 3 3 0 Calcitonin / CGRP / IAPP family WD40 PF00400.32 ORF100285 - 7.6e-25 86.7 21.6 0.00018 22.2 0.1 6.4 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF100285 - 4.3e-06 26.9 4.1 0.012 15.9 0.0 4.5 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF100285 - 0.0039 17.1 1.6 0.19 11.7 0.1 2.8 3 0 0 3 3 3 1 WD40-like Beta Propeller Repeat Ricin_B_lectin PF00652.22 ORF100285 - 0.074 13.3 3.8 0.057 13.7 1.7 1.9 1 1 1 2 2 2 0 Ricin-type beta-trefoil lectin domain Response_reg PF00072.24 NODE_11162_length_1313_cov_116.691706_g8269_i0reverse_frame_2 - 1.9e-17 63.4 0.1 2.9e-17 62.8 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain DUF2239 PF09998.9 ORF87824 - 0.016 15.0 0.1 0.033 14.0 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) MMADHC PF10229.9 ORF84855 - 6.8 6.4 9.4 3.9 7.2 5.4 2.4 2 1 0 2 2 2 0 Methylmalonic aciduria and homocystinuria type D protein Abhydrolase_1 PF00561.20 ORF77664 - 1.1e-16 61.2 0.1 2.5e-12 47.0 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF77664 - 3.1e-13 49.1 0.0 6.6e-13 48.0 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF77664 - 1.1e-06 28.1 0.0 0.019 14.3 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_5 PF12695.7 ORF77664 - 0.00034 20.4 0.0 0.0054 16.5 0.0 2.4 3 0 0 3 3 3 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF77664 - 0.011 15.2 0.4 0.096 12.2 0.0 2.3 2 1 0 2 2 2 0 Prolyl oligopeptidase family FSH1 PF03959.13 ORF77664 - 0.032 13.9 0.0 0.15 11.7 0.0 2.1 3 0 0 3 3 3 0 Serine hydrolase (FSH1) AXE1 PF05448.12 ORF77664 - 0.054 12.2 0.1 0.15 10.7 0.1 1.7 1 1 0 1 1 1 0 Acetyl xylan esterase (AXE1) BAAT_C PF08840.11 ORF77664 - 0.095 12.6 0.0 3.5 7.5 0.0 2.3 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Tubulin-binding PF00418.19 ORF77664 - 1.1 9.4 3.6 12 6.0 0.0 3.0 3 0 0 3 3 3 0 Tau and MAP protein, tubulin-binding repeat Chloroa_b-bind PF00504.21 ORF7340 - 9.4e-66 221.3 0.7 1.3e-32 113.6 0.0 2.3 2 0 0 2 2 2 2 Chlorophyll A-B binding protein OMPdecase PF00215.24 ORF7340 - 0.024 14.2 0.0 0.048 13.2 0.0 1.5 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family BtrH_N PF14399.6 ORF7340 - 0.031 14.5 0.0 17 5.7 0.0 3.6 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal Abhydrolase_1 PF00561.20 ORF72169 - 5.7e-17 62.2 1.0 9.8e-17 61.4 1.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF72169 - 6.8e-14 51.2 0.5 3.6e-13 48.9 0.1 2.4 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF72169 - 6e-09 35.5 0.0 1.3e-05 24.6 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF72169 - 0.00017 21.1 0.0 0.0082 15.6 0.0 2.6 3 0 0 3 3 3 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF72169 - 0.021 15.4 0.0 0.039 14.5 0.0 1.5 1 1 0 1 1 1 0 Alpha/beta hydrolase family FSH1 PF03959.13 ORF72169 - 0.088 12.5 0.0 0.44 10.2 0.0 1.9 2 0 0 2 2 2 0 Serine hydrolase (FSH1) DUF3098 PF11297.8 ORF72169 - 0.094 12.3 0.0 0.23 11.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3098) WD40 PF00400.32 ORF69125 - 1.4e-16 60.6 11.6 0.00037 21.2 0.0 6.2 5 1 1 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF69125 - 3.9e-10 39.9 4.2 0.00017 21.8 0.1 4.4 2 1 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF69125 - 0.0022 17.9 0.0 0.089 12.7 0.0 2.3 2 0 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 ORF69125 - 0.15 11.0 0.0 0.46 9.4 0.0 1.8 1 1 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Kelch_1 PF01344.25 ORF59824 - 2.9e-11 42.7 0.3 5e-09 35.6 0.1 2.7 3 0 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 ORF59824 - 2.9e-07 30.2 0.8 0.002 18.0 0.0 2.7 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF59824 - 8.2e-06 25.7 1.6 0.028 14.4 0.1 2.9 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF59824 - 6.1e-05 23.2 0.3 0.0083 16.4 0.0 2.5 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 ORF59824 - 0.0034 17.4 0.1 0.5 10.4 0.0 2.5 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF59824 - 0.08 13.3 0.0 18 5.7 0.0 2.6 2 0 0 2 2 2 0 Galactose oxidase, central domain SKA1 PF07160.12 ORF59824 - 2 8.2 18.9 0.38 10.6 10.9 2.6 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 Exonuc_VII_L PF02601.15 ORF59824 - 8.1 5.9 13.3 6.8 6.2 11.8 1.6 1 1 1 2 2 2 0 Exonuclease VII, large subunit DUF2203 PF09969.9 ORF59824 - 9.2 7.0 7.8 42 4.9 7.7 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) TPIP1 PF15338.6 ORF58833 - 0.012 15.6 0.2 0.45 10.6 0.1 2.7 2 1 1 3 3 3 0 p53-regulated apoptosis-inducing protein 1 p450 PF00067.22 ORF47465 - 3.6e-76 256.8 0.0 4.2e-76 256.6 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF262 PF03235.14 ORF47039 - 2.6e-15 57.2 0.0 4.8e-15 56.3 0.0 1.6 1 1 0 1 1 1 1 Protein of unknown function DUF262 UBA_4 PF14555.6 ORF43859 - 9.8e-09 34.9 0.3 2.2e-08 33.8 0.3 1.5 1 0 0 1 1 1 1 UBA-like domain UBX PF00789.20 ORF43859 - 0.0082 16.3 0.0 0.027 14.7 0.0 1.9 1 0 0 1 1 1 1 UBX domain Thioredoxin_7 PF13899.6 ORF43859 - 0.016 15.3 0.0 0.051 13.7 0.0 1.8 1 0 0 1 1 1 0 Thioredoxin-like BRAP2 PF07576.12 ORF43859 - 0.09 13.0 3.0 4 7.7 0.3 3.0 3 0 0 3 3 3 0 BRCA1-associated protein 2 DNAPolymera_Pol PF11590.8 ORF43859 - 0.5 10.3 1.6 5.4 7.0 0.0 2.7 3 0 0 3 3 3 0 DNA polymerase catalytic subunit Pol FA_hydroxylase PF04116.13 ORF39971 - 1.4e-23 83.7 10.7 1.4e-23 83.7 10.7 1.9 2 0 0 2 2 2 1 Fatty acid hydroxylase superfamily Abhydrolase_1 PF00561.20 ORF24675 - 1.1e-16 61.2 0.1 2.5e-12 47.0 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF24675 - 3.1e-13 49.1 0.0 6.6e-13 48.0 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF24675 - 1.1e-06 28.1 0.0 0.019 14.3 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_5 PF12695.7 ORF24675 - 0.00034 20.4 0.0 0.0054 16.5 0.0 2.4 3 0 0 3 3 3 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF24675 - 0.011 15.2 0.4 0.096 12.2 0.0 2.3 2 1 0 2 2 2 0 Prolyl oligopeptidase family FSH1 PF03959.13 ORF24675 - 0.032 13.9 0.0 0.15 11.7 0.0 2.1 3 0 0 3 3 3 0 Serine hydrolase (FSH1) AXE1 PF05448.12 ORF24675 - 0.054 12.2 0.1 0.15 10.7 0.1 1.7 1 1 0 1 1 1 0 Acetyl xylan esterase (AXE1) BAAT_C PF08840.11 ORF24675 - 0.095 12.6 0.0 3.5 7.5 0.0 2.3 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Tubulin-binding PF00418.19 ORF24675 - 1.1 9.4 3.6 12 6.0 0.0 3.0 3 0 0 3 3 3 0 Tau and MAP protein, tubulin-binding repeat 5_nucleotid_C PF02872.18 ORF19261 - 8.6e-12 45.5 0.0 1.7e-11 44.6 0.0 1.4 1 1 0 1 1 1 1 5'-nucleotidase, C-terminal domain EF-hand_7 PF13499.6 ORF19261 - 3.5e-08 33.8 0.0 0.00045 20.6 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF19261 - 3e-06 26.7 0.1 0.11 12.5 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF19261 - 3.6e-05 23.0 0.0 0.047 13.2 0.0 3.6 3 0 0 3 3 3 1 EF hand Chloroa_b-bind PF00504.21 ORF14990 - 9.4e-66 221.3 0.7 1.3e-32 113.6 0.0 2.3 2 0 0 2 2 2 2 Chlorophyll A-B binding protein OMPdecase PF00215.24 ORF14990 - 0.024 14.2 0.0 0.048 13.2 0.0 1.5 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family BtrH_N PF14399.6 ORF14990 - 0.031 14.5 0.0 17 5.7 0.0 3.6 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal Chloroa_b-bind PF00504.21 ORF11502 - 9.4e-66 221.3 0.7 1.3e-32 113.6 0.0 2.3 2 0 0 2 2 2 2 Chlorophyll A-B binding protein OMPdecase PF00215.24 ORF11502 - 0.024 14.2 0.0 0.048 13.2 0.0 1.5 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family BtrH_N PF14399.6 ORF11502 - 0.031 14.5 0.0 17 5.7 0.0 3.6 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal HOK_GEF PF01848.16 ORF111890 - 0.048 13.1 0.1 0.088 12.2 0.1 1.4 1 0 0 1 1 1 0 Hok/gef family T2SSM_b PF10741.9 ORF111890 - 0.081 12.7 2.0 8.6 6.2 0.0 2.8 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein M subtype b Chloroa_b-bind PF00504.21 ORF110741 - 9.4e-66 221.3 0.7 1.3e-32 113.6 0.0 2.3 2 0 0 2 2 2 2 Chlorophyll A-B binding protein OMPdecase PF00215.24 ORF110741 - 0.024 14.2 0.0 0.048 13.2 0.0 1.5 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family BtrH_N PF14399.6 ORF110741 - 0.031 14.5 0.0 17 5.7 0.0 3.6 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal Trypan_PARP PF05887.11 ORF108687 - 7.5 6.5 16.7 0.21 11.6 8.4 2.4 2 1 1 3 3 3 0 Procyclic acidic repetitive protein (PARP) Abhydro_lipase PF04083.16 ORF97000 - 1.1e-13 50.5 0.0 2.3e-13 49.5 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF97000 - 2.2e-13 50.5 0.1 9.4e-13 48.4 0.1 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF97000 - 2.9e-07 30.0 0.0 0.00026 20.3 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 ESSS PF10183.9 ORF97000 - 0.073 13.3 0.2 0.23 11.7 0.1 1.8 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) Abhydrolase_2 PF02230.16 ORF97000 - 0.079 12.7 0.0 0.27 11.0 0.0 1.7 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase FSH1 PF03959.13 ORF97000 - 0.13 11.9 0.0 3.2 7.4 0.0 2.1 2 0 0 2 2 2 0 Serine hydrolase (FSH1) Pro_CA PF00484.19 ORF93923 - 2.3e-64 216.4 0.0 6.6e-35 120.7 0.0 2.1 2 0 0 2 2 2 2 Carbonic anhydrase Antimicrobial24 PF16049.5 ORF93923 - 0.38 10.8 1.5 4.2 7.4 0.1 2.4 2 0 0 2 2 2 0 Frog antimicrobial peptide PGM_PMM_III PF02880.16 ORF89947 - 2.5e-23 82.4 0.0 4e-23 81.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 ORF89947 - 7.7e-06 26.5 0.0 2.7e-05 24.7 0.0 1.9 1 1 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 ORF89947 - 0.00039 20.6 0.0 0.00089 19.4 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain adh_short PF00106.25 ORF87158 - 1.4e-42 145.4 6.4 2.8e-42 144.4 6.4 1.5 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF87158 - 1.8e-32 112.8 3.0 2.7e-32 112.2 3.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase SCP2 PF02036.17 ORF87158 - 5.2e-18 65.4 0.1 1.2e-17 64.3 0.1 1.5 1 0 0 1 1 1 1 SCP-2 sterol transfer family KR PF08659.10 ORF87158 - 5.8e-17 62.2 1.0 9.4e-17 61.5 1.0 1.3 1 0 0 1 1 1 1 KR domain Alkyl_sulf_C PF14864.6 ORF87158 - 0.00061 20.1 0.0 0.0028 17.9 0.0 2.0 3 0 0 3 3 3 1 Alkyl sulfatase C-terminal DUF3837 PF12939.7 ORF87158 - 0.069 13.6 0.1 2 8.9 0.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) CobN-Mg_chel PF02514.16 ORF87158 - 0.071 10.8 0.0 1.5 6.5 0.0 2.0 2 0 0 2 2 2 0 CobN/Magnesium Chelatase Glyco_hydro_7 PF00840.20 ORF82988 - 1.7e-123 412.6 7.0 1.7e-123 412.6 7.0 1.9 2 0 0 2 2 2 1 Glycosyl hydrolase family 7 CBM_1 PF00734.18 ORF82988 - 1.5e-10 40.8 10.1 6e-10 38.9 10.1 2.1 1 0 0 1 1 1 1 Fungal cellulose binding domain Glyco_hydro_7 PF00840.20 ORF81697 - 1.7e-123 412.6 7.0 1.7e-123 412.6 7.0 1.9 2 0 0 2 2 2 1 Glycosyl hydrolase family 7 CBM_1 PF00734.18 ORF81697 - 1.5e-10 40.8 10.1 6e-10 38.9 10.1 2.1 1 0 0 1 1 1 1 Fungal cellulose binding domain Abhydro_lipase PF04083.16 ORF76739 - 1.1e-13 50.5 0.0 2.3e-13 49.5 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF76739 - 2.2e-13 50.5 0.1 9.4e-13 48.4 0.1 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF76739 - 2.9e-07 30.0 0.0 0.00026 20.3 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 ESSS PF10183.9 ORF76739 - 0.073 13.3 0.2 0.23 11.7 0.1 1.8 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) Abhydrolase_2 PF02230.16 ORF76739 - 0.079 12.7 0.0 0.27 11.0 0.0 1.7 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase FSH1 PF03959.13 ORF76739 - 0.13 11.9 0.0 3.2 7.4 0.0 2.1 2 0 0 2 2 2 0 Serine hydrolase (FSH1) FAM150 PF15129.6 ORF75294 - 0.13 12.4 0.1 1.9 8.7 0.0 2.6 3 0 0 3 3 3 0 FAM150 family Sulfatase PF00884.23 ORF74385 - 2.7e-31 109.1 0.1 3.2e-31 108.9 0.1 1.1 1 0 0 1 1 1 1 Sulfatase DUF4994 PF16385.5 ORF74385 - 7.8e-06 25.7 0.0 1.6e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function Sulfatase_C PF14707.6 ORF74385 - 0.021 15.5 0.3 0.098 13.4 0.0 2.2 2 1 0 2 2 2 0 C-terminal region of aryl-sulfatase DUF229 PF02995.17 ORF74385 - 0.092 11.3 0.0 0.33 9.5 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF229) Glyco_hydro_7 PF00840.20 ORF74371 - 1.7e-123 412.6 7.0 1.7e-123 412.6 7.0 1.9 2 0 0 2 2 2 1 Glycosyl hydrolase family 7 CBM_1 PF00734.18 ORF74371 - 1.5e-10 40.8 10.1 6e-10 38.9 10.1 2.1 1 0 0 1 1 1 1 Fungal cellulose binding domain SDH_alpha PF03313.15 ORF70484 - 6.1e-49 167.0 16.3 6.1e-49 167.0 16.3 2.2 1 1 0 2 2 2 1 Serine dehydratase alpha chain Copper-fist PF00649.18 ORF70484 - 0.015 14.7 0.0 0.043 13.3 0.0 1.7 1 0 0 1 1 1 0 Copper fist DNA binding domain EspB PF05802.11 ORF70484 - 0.033 14.2 10.3 1.1 9.2 3.4 2.2 2 0 0 2 2 2 0 Enterobacterial EspB protein MmgE_PrpD PF03972.14 ORF70484 - 1.6 7.2 15.7 0.051 12.1 7.3 2.2 2 0 0 2 2 2 0 MmgE/PrpD family adh_short PF00106.25 ORF61032 - 1.4e-42 145.4 6.4 2.8e-42 144.4 6.4 1.5 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF61032 - 1.8e-32 112.8 3.0 2.7e-32 112.2 3.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase SCP2 PF02036.17 ORF61032 - 5.2e-18 65.4 0.1 1.2e-17 64.3 0.1 1.5 1 0 0 1 1 1 1 SCP-2 sterol transfer family KR PF08659.10 ORF61032 - 5.8e-17 62.2 1.0 9.4e-17 61.5 1.0 1.3 1 0 0 1 1 1 1 KR domain Alkyl_sulf_C PF14864.6 ORF61032 - 0.00061 20.1 0.0 0.0028 17.9 0.0 2.0 3 0 0 3 3 3 1 Alkyl sulfatase C-terminal DUF3837 PF12939.7 ORF61032 - 0.069 13.6 0.1 2 8.9 0.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) CobN-Mg_chel PF02514.16 ORF61032 - 0.071 10.8 0.0 1.5 6.5 0.0 2.0 2 0 0 2 2 2 0 CobN/Magnesium Chelatase Sulfotransfer_3 PF13469.6 ORF55932 - 1.5e-08 35.3 0.1 1.7e-06 28.6 0.1 2.4 2 0 0 2 2 2 2 Sulfotransferase family Sulfotransfer_1 PF00685.27 ORF55932 - 1.4e-06 28.0 0.5 5.7e-05 22.7 0.4 2.4 2 0 0 2 2 2 1 Sulfotransferase domain CHDCT2 PF08074.11 ORF55932 - 0.0079 16.4 0.1 0.015 15.5 0.1 1.5 1 0 0 1 1 1 1 CHDCT2 (NUC038) domain Glycos_transf_4 PF00953.21 ORF55693 - 6e-34 117.3 13.0 6e-34 117.3 13.0 2.0 2 1 0 2 2 2 1 Glycosyl transferase family 4 VIT1 PF01988.19 ORF55693 - 0.0046 16.9 0.4 0.0096 15.8 0.0 1.8 2 0 0 2 2 2 1 VIT family Pigment_DH PF06324.11 ORF55693 - 0.12 12.5 0.2 0.42 10.8 0.2 1.9 1 0 0 1 1 1 0 Pigment-dispersing hormone (PDH) ABC_tran PF00005.27 ORF55410 - 4.6e-06 27.2 0.0 2.7e-05 24.7 0.0 2.1 1 1 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 ORF55410 - 0.13 12.7 0.3 24 5.3 0.1 2.5 3 0 0 3 3 3 0 AAA ATPase domain HOOK PF05622.12 ORF4964 - 0.0012 17.1 30.7 0.0012 17.1 30.7 2.1 1 1 1 2 2 2 2 HOOK protein BLOC1_2 PF10046.9 ORF4964 - 0.0015 18.8 14.9 0.0015 18.8 14.9 4.3 2 1 3 5 5 5 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_DNA_bd PF12329.8 ORF4964 - 0.0026 17.7 20.8 0.0026 17.7 20.8 4.4 1 1 3 4 4 3 1 TATA element modulatory factor 1 DNA binding Phage_GP20 PF06810.11 ORF4964 - 0.0076 16.1 51.0 0.38 10.6 17.4 3.9 1 1 2 3 3 3 3 Phage minor structural protein GP20 Seryl_tRNA_N PF02403.22 ORF4964 - 0.0098 16.1 20.1 0.0098 16.1 20.1 3.4 1 1 2 3 3 2 1 Seryl-tRNA synthetase N-terminal domain HTH_3 PF01381.22 ORF4964 - 0.019 15.0 1.2 0.068 13.2 1.2 2.0 1 0 0 1 1 1 0 Helix-turn-helix HAUS-augmin3 PF14932.6 ORF4964 - 0.32 10.5 41.7 1.3 8.5 13.6 2.4 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 DivIVA PF05103.13 ORF4964 - 0.48 10.5 45.8 0.85 9.7 21.9 2.5 1 1 1 2 2 2 0 DivIVA protein Fez1 PF06818.15 ORF4964 - 0.57 10.6 46.5 0.041 14.3 28.3 2.2 1 1 1 2 2 2 0 Fez1 DUF3584 PF12128.8 ORF4964 - 0.64 7.5 41.2 0.86 7.0 41.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) S_locus_glycop PF00954.20 ORF4964 - 1.7 9.2 4.2 1.4 9.4 0.5 2.6 2 1 1 3 3 3 0 S-locus glycoprotein domain Spc7 PF08317.11 ORF4964 - 1.9 7.3 55.4 1.6 7.5 35.4 2.7 2 1 1 3 3 3 0 Spc7 kinetochore protein HrpB7 PF09486.10 ORF4964 - 2.1 8.7 19.8 9.5 6.6 13.9 3.0 1 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) ERM PF00769.19 ORF4964 - 2.5 7.8 51.2 0.33 10.7 30.9 2.1 1 1 1 2 2 2 0 Ezrin/radixin/moesin family Tropomyosin_1 PF12718.7 ORF4964 - 3.5 7.8 59.1 0.098 12.8 43.4 2.3 1 1 1 2 2 2 0 Tropomyosin like ATG16 PF08614.11 ORF4964 - 3.7 7.7 49.5 1.1e+02 2.9 48.1 2.7 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 ORF4964 - 5.9 6.9 51.9 2 8.4 20.5 2.7 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 UPF0242 PF06785.11 ORF4964 - 6 6.9 60.7 16 5.5 26.8 2.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus HTH_19 PF12844.7 ORF4964 - 6 7.0 11.9 0.16 12.0 3.5 2.7 2 1 1 3 3 3 0 Helix-turn-helix domain Synaptobrevin PF00957.21 ORF4964 - 7 6.5 20.9 2.1 8.2 8.3 3.5 3 1 0 3 3 3 0 Synaptobrevin PspA_IM30 PF04012.12 ORF4964 - 7.2 6.1 42.0 1.9 8.0 26.5 2.6 2 1 1 3 3 3 0 PspA/IM30 family Glycos_transf_4 PF00953.21 ORF46292 - 4.6e-34 117.7 12.9 4.6e-34 117.7 12.9 2.0 2 1 0 2 2 2 1 Glycosyl transferase family 4 VIT1 PF01988.19 ORF46292 - 0.0046 16.9 0.4 0.0096 15.8 0.0 1.8 2 0 0 2 2 2 1 VIT family Pigment_DH PF06324.11 ORF46292 - 0.12 12.5 0.2 0.42 10.8 0.2 1.9 1 0 0 1 1 1 0 Pigment-dispersing hormone (PDH) cobW PF02492.19 ORF44065 - 7e-53 178.8 0.7 9.1e-53 178.5 0.7 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF44065 - 2.1e-23 82.0 0.0 5.7e-23 80.7 0.0 1.7 2 0 0 2 2 2 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 ORF44065 - 0.0013 18.7 0.0 0.94 9.4 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase MobB PF03205.14 ORF44065 - 0.028 14.3 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B MeaB PF03308.16 ORF44065 - 0.031 13.3 0.0 0.12 11.3 0.0 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TsaE PF02367.17 ORF44065 - 0.034 14.1 0.0 0.071 13.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 ORF44065 - 0.074 13.2 0.1 0.15 12.2 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF44065 - 0.074 13.6 0.1 0.15 12.6 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF44065 - 0.083 13.3 0.0 0.2 12.0 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Glyco_hydro_7 PF00840.20 ORF40571 - 1.7e-123 412.6 7.0 1.7e-123 412.6 7.0 1.9 2 0 0 2 2 2 1 Glycosyl hydrolase family 7 CBM_1 PF00734.18 ORF40571 - 1.5e-10 40.8 10.1 6e-10 38.9 10.1 2.1 1 0 0 1 1 1 1 Fungal cellulose binding domain Glyco_hydro_7 PF00840.20 ORF40104 - 1.7e-123 412.6 7.0 1.7e-123 412.6 7.0 1.9 2 0 0 2 2 2 1 Glycosyl hydrolase family 7 CBM_1 PF00734.18 ORF40104 - 1.5e-10 40.8 10.1 6e-10 38.9 10.1 2.1 1 0 0 1 1 1 1 Fungal cellulose binding domain Tombus_movement PF05318.12 ORF3624 - 0.39 11.6 4.4 2.6 9.0 0.1 3.0 3 0 0 3 3 3 0 Tombusvirus movement protein p450 PF00067.22 ORF35048 - 4.9e-11 42.0 0.0 8.8e-11 41.2 0.0 1.3 1 0 0 1 1 1 1 Cytochrome P450 KR PF08659.10 ORF34943 - 1e-56 191.7 0.1 1.5e-56 191.2 0.1 1.2 1 0 0 1 1 1 1 KR domain adh_short PF00106.25 ORF34943 - 7.6e-09 35.3 0.0 1.4e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF34943 - 7.7e-06 25.6 0.0 1.2e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase MMR_HSR1 PF01926.23 ORF342 - 2e-08 34.3 0.0 5.9e-08 32.8 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF342 - 3.6e-06 27.0 0.2 0.00017 21.5 0.1 2.5 2 1 0 2 2 2 1 RsgA GTPase Gtr1_RagA PF04670.12 ORF342 - 1.1e-05 25.0 0.0 1.9e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region AIG1 PF04548.16 ORF342 - 4.3e-05 23.0 0.0 0.0001 21.7 0.0 1.6 1 1 0 1 1 1 1 AIG1 family AAA_33 PF13671.6 ORF342 - 0.0011 19.2 0.0 0.0035 17.5 0.0 2.0 1 0 0 1 1 1 1 AAA domain FeoB_N PF02421.18 ORF342 - 0.0012 18.4 0.0 0.0019 17.7 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Septin PF00735.18 ORF342 - 0.0013 18.1 0.1 0.015 14.6 0.0 2.3 2 1 0 2 2 2 1 Septin Dynamin_N PF00350.23 ORF342 - 0.005 16.9 0.8 0.068 13.2 0.0 2.7 2 1 1 3 3 3 1 Dynamin family SRPRB PF09439.10 ORF342 - 0.011 15.1 0.0 0.021 14.3 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF342 - 0.012 15.9 0.0 0.05 13.9 0.0 2.2 1 1 0 1 1 1 0 AAA domain ADK PF00406.22 ORF342 - 0.018 15.1 0.1 0.12 12.5 0.1 2.2 1 1 0 1 1 1 0 Adenylate kinase Roc PF08477.13 ORF342 - 0.032 14.5 0.3 0.13 12.5 0.0 2.2 2 1 0 2 2 1 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 ORF342 - 0.035 14.6 0.0 0.15 12.6 0.0 2.2 2 1 0 2 2 2 0 ABC transporter Ras PF00071.22 ORF342 - 0.045 13.3 0.0 0.11 12.1 0.0 1.8 1 1 0 1 1 1 0 Ras family ATP_bind_1 PF03029.17 ORF342 - 0.065 13.0 2.5 2.2 8.0 0.2 2.6 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein HOOK PF05622.12 ORF32417 - 0.0012 17.1 30.7 0.0012 17.1 30.7 2.1 1 1 1 2 2 2 2 HOOK protein BLOC1_2 PF10046.9 ORF32417 - 0.0015 18.8 14.9 0.0015 18.8 14.9 4.3 2 1 3 5 5 5 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_DNA_bd PF12329.8 ORF32417 - 0.0026 17.7 20.8 0.0026 17.7 20.8 4.4 1 1 3 4 4 3 1 TATA element modulatory factor 1 DNA binding Phage_GP20 PF06810.11 ORF32417 - 0.0076 16.1 51.0 0.38 10.6 17.4 3.9 1 1 2 3 3 3 3 Phage minor structural protein GP20 Seryl_tRNA_N PF02403.22 ORF32417 - 0.0098 16.1 20.1 0.0098 16.1 20.1 3.4 1 1 2 3 3 2 1 Seryl-tRNA synthetase N-terminal domain HTH_3 PF01381.22 ORF32417 - 0.019 15.0 1.2 0.068 13.2 1.2 2.0 1 0 0 1 1 1 0 Helix-turn-helix HAUS-augmin3 PF14932.6 ORF32417 - 0.32 10.5 41.7 1.3 8.5 13.6 2.4 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 DivIVA PF05103.13 ORF32417 - 0.48 10.5 45.8 0.85 9.7 21.9 2.5 1 1 1 2 2 2 0 DivIVA protein Fez1 PF06818.15 ORF32417 - 0.57 10.6 46.5 0.041 14.3 28.3 2.2 1 1 1 2 2 2 0 Fez1 DUF3584 PF12128.8 ORF32417 - 0.64 7.5 41.2 0.86 7.0 41.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) S_locus_glycop PF00954.20 ORF32417 - 1.7 9.2 4.2 1.4 9.4 0.5 2.6 2 1 1 3 3 3 0 S-locus glycoprotein domain Spc7 PF08317.11 ORF32417 - 1.9 7.3 55.4 1.6 7.5 35.4 2.7 2 1 1 3 3 3 0 Spc7 kinetochore protein HrpB7 PF09486.10 ORF32417 - 2.1 8.7 19.8 9.5 6.6 13.9 3.0 1 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) ERM PF00769.19 ORF32417 - 2.5 7.8 51.2 0.33 10.7 30.9 2.1 1 1 1 2 2 2 0 Ezrin/radixin/moesin family Tropomyosin_1 PF12718.7 ORF32417 - 3.5 7.8 59.1 0.098 12.8 43.4 2.3 1 1 1 2 2 2 0 Tropomyosin like ATG16 PF08614.11 ORF32417 - 3.7 7.7 49.5 1.1e+02 2.9 48.1 2.7 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 ORF32417 - 5.9 6.9 51.9 2 8.4 20.5 2.7 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 UPF0242 PF06785.11 ORF32417 - 6 6.9 60.7 16 5.5 26.8 2.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus HTH_19 PF12844.7 ORF32417 - 6 7.0 11.9 0.16 12.0 3.5 2.7 2 1 1 3 3 3 0 Helix-turn-helix domain Synaptobrevin PF00957.21 ORF32417 - 7 6.5 20.9 2.1 8.2 8.3 3.5 3 1 0 3 3 3 0 Synaptobrevin PspA_IM30 PF04012.12 ORF32417 - 7.2 6.1 42.0 1.9 8.0 26.5 2.6 2 1 1 3 3 3 0 PspA/IM30 family S1 PF00575.23 ORF29488 - 6.9e-05 23.1 0.0 0.058 13.7 0.0 2.7 2 0 0 2 2 2 2 S1 RNA binding domain CCDC71L PF15374.6 ORF29488 - 0.0039 16.5 0.3 0.0048 16.2 0.3 1.2 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 71L PCB_OB PF17092.5 ORF29488 - 0.015 16.0 0.0 0.13 13.0 0.0 2.4 2 0 0 2 2 2 0 Penicillin-binding protein OB-like domain efb-c PF12199.8 ORF29488 - 0.23 11.5 0.9 0.38 10.8 0.9 1.3 1 0 0 1 1 1 0 Extracellular fibrinogen binding protein C terminal Prismane PF03063.20 ORF27127 - 0.21 10.2 4.8 0.31 9.7 4.8 1.1 1 0 0 1 1 1 0 Prismane/CO dehydrogenase family Pex19 PF04614.12 ORF27127 - 8.9 6.0 17.4 1.3 8.7 6.4 2.3 1 1 1 2 2 2 0 Pex19 protein family MA3 PF02847.17 ORF25458 - 0.046 13.7 0.3 0.096 12.7 0.3 1.4 1 0 0 1 1 1 0 MA3 domain Glyco_hydro_7 PF00840.20 ORF23806 - 1.7e-123 412.6 7.0 1.7e-123 412.6 7.0 1.9 2 0 0 2 2 2 1 Glycosyl hydrolase family 7 CBM_1 PF00734.18 ORF23806 - 1.5e-10 40.8 10.1 6e-10 38.9 10.1 2.1 1 0 0 1 1 1 1 Fungal cellulose binding domain F-box-like PF12937.7 ORF23024 - 0.0015 18.4 0.5 0.0015 18.4 0.5 3.0 4 0 0 4 4 4 1 F-box-like Elongin_A PF06881.11 ORF23024 - 0.041 14.4 0.7 0.065 13.8 0.7 1.3 1 0 0 1 1 1 0 RNA polymerase II transcription factor SIII (Elongin) subunit A Glyco_hydro_7 PF00840.20 ORF19096 - 1.7e-123 412.6 7.0 1.7e-123 412.6 7.0 1.9 2 0 0 2 2 2 1 Glycosyl hydrolase family 7 CBM_1 PF00734.18 ORF19096 - 1.5e-10 40.8 10.1 6e-10 38.9 10.1 2.1 1 0 0 1 1 1 1 Fungal cellulose binding domain FUSC PF04632.12 ORF17171 - 0.19 10.2 6.3 0.42 9.1 6.3 1.5 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF4795 PF16043.5 ORF17171 - 0.53 9.8 9.1 0.15 11.7 4.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) Spc7 PF08317.11 ORF17171 - 1.5 7.6 14.5 0.15 10.9 7.5 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein ANAPC4_WD40 PF12894.7 ORF1189 - 4.2e-07 30.2 0.0 0.18 12.1 0.0 4.8 1 1 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF1189 - 2.3e-05 25.0 9.2 0.032 15.1 0.7 5.7 5 1 1 6 6 6 1 WD domain, G-beta repeat eIF2A PF08662.11 ORF1189 - 0.0025 17.7 0.0 0.005 16.7 0.0 1.4 1 0 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A Cytochrom_D1 PF02239.16 ORF1189 - 0.056 12.0 0.0 0.11 10.9 0.0 1.5 2 0 0 2 2 2 0 Cytochrome D1 heme domain Glyco_hydro_7 PF00840.20 ORF110616 - 1.7e-123 412.6 7.0 1.7e-123 412.6 7.0 1.9 2 0 0 2 2 2 1 Glycosyl hydrolase family 7 CBM_1 PF00734.18 ORF110616 - 1.5e-10 40.8 10.1 6e-10 38.9 10.1 2.1 1 0 0 1 1 1 1 Fungal cellulose binding domain adh_short PF00106.25 ORF107417 - 1.4e-42 145.4 6.4 2.8e-42 144.4 6.4 1.5 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF107417 - 1.8e-32 112.8 3.0 2.7e-32 112.2 3.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase SCP2 PF02036.17 ORF107417 - 5.2e-18 65.4 0.1 1.2e-17 64.3 0.1 1.5 1 0 0 1 1 1 1 SCP-2 sterol transfer family KR PF08659.10 ORF107417 - 5.8e-17 62.2 1.0 9.4e-17 61.5 1.0 1.3 1 0 0 1 1 1 1 KR domain Alkyl_sulf_C PF14864.6 ORF107417 - 0.00061 20.1 0.0 0.0028 17.9 0.0 2.0 3 0 0 3 3 3 1 Alkyl sulfatase C-terminal DUF3837 PF12939.7 ORF107417 - 0.069 13.6 0.1 2 8.9 0.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) CobN-Mg_chel PF02514.16 ORF107417 - 0.071 10.8 0.0 1.5 6.5 0.0 2.0 2 0 0 2 2 2 0 CobN/Magnesium Chelatase DUF4502 PF14950.6 ORF99259 - 0.18 11.2 3.1 0.26 10.7 3.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4502) Aa_trans PF01490.18 ORF92388 - 1.9e-26 92.7 18.1 1.9e-26 92.7 18.1 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein Cyt-b5 PF00173.28 ORF88476 - 5e-22 77.8 0.0 8.4e-22 77.1 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Sdh_cyt PF01127.22 ORF88476 - 0.0056 16.7 14.8 0.53 10.3 4.5 2.8 1 1 1 2 2 2 2 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Cyt-b5 PF00173.28 ORF87821 - 5e-22 77.8 0.0 8.4e-22 77.1 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Sdh_cyt PF01127.22 ORF87821 - 0.0056 16.7 14.8 0.53 10.3 4.5 2.8 1 1 1 2 2 2 2 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MJ1316 PF04457.12 ORF81661 - 6.8e-11 42.8 1.0 2.3e-10 41.1 0.1 2.4 2 0 0 2 2 2 1 MJ1316 RNA cyclic group end recognition domain RCC1 PF00415.18 ORF81661 - 5.8e-07 30.0 0.0 1.4e-06 28.9 0.0 1.7 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat SAM_1 PF00536.30 ORF81661 - 1.7e-05 25.2 0.0 3.7e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 ORF81661 - 5.4e-05 23.2 0.0 0.00012 22.1 0.0 1.6 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Hamartin PF04388.12 ORF81661 - 0.021 13.5 4.2 0.029 13.1 4.2 1.1 1 0 0 1 1 1 0 Hamartin protein RCC1_2 PF13540.6 ORF81661 - 0.082 12.7 0.7 6.6 6.7 0.2 3.1 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat Presenilin PF01080.17 ORF81661 - 1.2 7.8 4.7 1.6 7.4 4.7 1.1 1 0 0 1 1 1 0 Presenilin AAA_11 PF13086.6 ORF81661 - 2.1 8.1 8.1 3.8 7.2 8.1 1.4 1 0 0 1 1 1 0 AAA domain Aa_trans PF01490.18 ORF76986 - 9.7e-27 93.7 19.4 9.7e-27 93.7 19.4 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein Transglut_core PF01841.19 ORF75825 - 2.8e-13 50.3 1.5 5.4e-13 49.4 1.5 1.5 1 0 0 1 1 1 1 Transglutaminase-like superfamily Laminin_G_3 PF13385.6 ORF75825 - 5.6e-08 33.1 0.0 1e-07 32.2 0.0 1.3 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Rad4 PF03835.15 ORF75825 - 6.4e-06 25.9 0.5 1.1e-05 25.1 0.5 1.3 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain PAW PF04721.17 ORF75825 - 0.00047 20.0 0.0 0.00074 19.4 0.0 1.3 1 0 0 1 1 1 1 PNGase C-terminal domain, mannose-binding module PAW Cyt-b5 PF00173.28 ORF69439 - 5e-22 77.8 0.0 8.4e-22 77.1 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Sdh_cyt PF01127.22 ORF69439 - 0.0064 16.5 15.0 0.58 10.2 4.5 2.8 1 1 1 2 2 2 2 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF1810 PF08837.11 ORF63404 - 7.3e-23 80.9 0.0 1.1e-22 80.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1810) RimM PF01782.18 ORF55528 - 1.4e-08 34.9 1.3 2.5e-07 30.8 1.3 2.4 1 1 0 1 1 1 1 RimM N-terminal domain Ammonium_transp PF00909.21 ORF51422 - 1.7e-101 339.8 36.5 2e-101 339.6 36.5 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family DUF2275 PF10039.9 ORF51422 - 0.1 12.7 0.5 0.21 11.6 0.0 1.7 2 0 0 2 2 2 0 Predicted integral membrane protein (DUF2275) DUF2749 PF10907.8 ORF51422 - 0.65 10.2 7.5 2.4 8.4 3.0 3.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) Asp PF00026.23 ORF50315 - 4.5e-09 36.2 0.4 1.5e-06 27.9 0.0 2.9 1 1 1 2 2 2 2 Eukaryotic aspartyl protease DUF3443 PF11925.8 ORF50315 - 0.074 11.9 0.0 0.13 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3443) TAXi_C PF14541.6 ORF50315 - 0.17 11.7 0.0 1.4 8.7 0.0 2.1 2 0 0 2 2 2 0 Xylanase inhibitor C-terminal DUF2353 PF09789.9 ORF45912 - 0.0021 17.5 0.0 0.0021 17.5 0.0 3.9 2 1 2 4 4 4 1 Uncharacterized coiled-coil protein (DUF2353) DUF4407 PF14362.6 ORF45912 - 0.024 14.0 71.1 0.69 9.2 28.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) Ten1_2 PF15490.6 ORF45912 - 0.5 10.1 11.7 1.2 8.8 1.6 3.1 2 1 1 3 3 3 0 Telomere-capping, CST complex subunit Ran-binding PF05508.11 ORF45912 - 0.94 8.4 31.7 0.28 10.1 6.1 2.9 1 1 2 3 3 3 0 RanGTP-binding protein DUF724 PF05266.14 ORF45912 - 1.4 8.8 54.0 0.13 12.1 12.2 3.6 2 1 2 4 4 4 0 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF45912 - 6.3 6.9 38.1 7.6 6.6 9.4 3.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 ORF45912 - 9.8 6.4 75.9 0.16 12.1 7.9 6.5 3 2 3 6 6 6 0 Centrosome localisation domain of PPC89 MurJ PF03023.14 ORF39705 - 1.9e-06 26.8 1.1 1.9e-06 26.8 1.1 2.6 2 1 0 2 2 2 1 Lipid II flippase MurJ MatE PF01554.18 ORF39705 - 2.5e-06 27.3 26.6 8.8e-05 22.2 6.9 3.5 2 1 1 3 3 3 2 MatE Polysacc_synt_C PF14667.6 ORF39705 - 5.7e-06 26.5 0.4 5.7e-06 26.5 0.4 3.9 3 1 1 5 5 5 1 Polysaccharide biosynthesis C-terminal domain DUF2512 PF10710.9 ORF39705 - 0.35 10.5 0.1 0.35 10.5 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2512) HET PF06985.11 ORF39093 - 0.073 13.4 0.0 0.23 11.8 0.0 1.8 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) Aa_trans PF01490.18 ORF35767 - 1.9e-26 92.7 18.1 1.9e-26 92.7 18.1 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein DUF273 PF03314.14 ORF32685 - 0.046 13.3 0.0 0.18 11.4 0.0 1.9 3 0 0 3 3 3 0 Protein of unknown function, DUF273 adh_short_C2 PF13561.6 ORF20424 - 1.4e-45 155.7 0.1 2e-45 155.2 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF20424 - 9.6e-43 145.9 0.4 1.3e-42 145.5 0.4 1.2 1 0 0 1 1 1 1 short chain dehydrogenase zf-C3HC4_3 PF13920.6 ORF20424 - 1.3e-09 37.8 14.5 3e-09 36.6 14.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) KR PF08659.10 ORF20424 - 3.8e-08 33.5 0.2 2.6e-06 27.5 0.2 2.2 2 0 0 2 2 2 1 KR domain zf-C3HC4_2 PF13923.6 ORF20424 - 1.8e-07 30.9 17.4 3.8e-07 29.8 17.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF20424 - 1.4e-06 28.0 17.8 3.4e-06 26.8 17.8 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF20424 - 3.9e-06 26.8 13.3 4.1e-05 23.5 13.8 2.3 1 1 1 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF20424 - 5e-06 26.3 14.4 9.7e-06 25.4 14.4 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF20424 - 5.4e-06 26.6 16.8 5.4e-06 26.6 16.8 1.9 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 ORF20424 - 5.1e-05 23.2 16.3 0.00012 22.0 16.3 1.6 1 0 0 1 1 1 1 zinc-RING finger domain ADH_zinc_N PF00107.26 ORF20424 - 0.00013 22.0 0.4 0.00031 20.7 0.4 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase zf-C3HC4_4 PF15227.6 ORF20424 - 0.0031 17.6 18.0 0.0076 16.4 18.0 1.7 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Epimerase PF01370.21 ORF20424 - 0.0067 15.9 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 ORF20424 - 0.0077 16.1 0.3 0.019 14.9 0.3 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF20424 - 0.015 15.6 0.2 0.028 14.7 0.2 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain zf-RING_6 PF14835.6 ORF20424 - 0.032 14.1 7.6 0.076 12.9 7.6 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_4 PF14570.6 ORF20424 - 0.048 13.5 16.3 0.17 11.7 16.3 2.0 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_10 PF16685.5 ORF20424 - 5 7.3 11.4 10 6.3 11.4 1.5 1 0 0 1 1 1 0 zinc RING finger of MSL2 ANAPC4_WD40 PF12894.7 ORF16664 - 0.0012 19.1 0.0 3.3 8.1 0.0 2.7 2 1 0 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Lzipper-MIP1 PF14389.6 ORF12895 - 0.13 12.6 0.8 0.31 11.4 0.8 1.5 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 UPF0182 PF03699.13 ORF12895 - 0.16 10.1 3.8 0.45 8.6 0.3 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0182) DUF948 PF06103.11 ORF12895 - 0.16 12.3 0.4 0.81 10.0 0.3 2.3 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Fungal_TACC PF12709.7 ORF12895 - 0.17 12.3 1.2 0.38 11.2 1.2 1.5 1 0 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins DivIC PF04977.15 ORF12895 - 0.97 9.2 4.1 1.4 8.7 2.2 2.2 2 0 0 2 2 2 0 Septum formation initiator Cep57_CLD PF14073.6 ORF12895 - 2.4 8.2 7.6 0.16 12.0 2.3 1.7 2 0 0 2 2 2 0 Centrosome localisation domain of Cep57 Ax_dynein_light PF10211.9 ORF12895 - 3.1 7.7 6.8 0.28 11.1 1.5 1.8 2 0 0 2 2 2 0 Axonemal dynein light chain Glyco_hydro_31 PF01055.26 ORF10914 - 8.2e-59 199.9 0.1 1e-58 199.6 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF10914 - 0.045 14.0 0.0 0.092 13.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) DUF2576 PF10845.8 ORF101059 - 0.048 13.3 0.2 0.11 12.1 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) betaPIX_CC PF16523.5 ORF101059 - 0.074 12.9 6.0 0.28 11.0 1.6 2.7 1 1 1 2 2 2 0 betaPIX coiled coil NPV_P10 PF05531.12 ORF101059 - 0.074 13.5 1.0 0.33 11.4 0.6 2.4 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Spc7 PF08317.11 ORF101059 - 0.14 11.0 6.5 0.27 10.1 6.5 1.4 1 0 0 1 1 1 0 Spc7 kinetochore protein ABC_membrane PF00664.23 ORF89893 - 1.3e-14 54.5 25.0 1.6e-14 54.2 25.0 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region CcmD PF04995.14 ORF89893 - 0.01 15.9 0.1 0.01 15.9 0.1 2.6 3 0 0 3 3 3 0 Heme exporter protein D (CcmD) Baculo_gp41 PF04700.12 ORF89893 - 0.089 12.6 3.2 3.4 7.4 0.5 3.0 3 0 0 3 3 3 0 Structural glycoprotein p40/gp41 conserved region Cys_Met_Meta_PP PF01053.20 ORF87621 - 2e-141 471.0 0.0 2.3e-141 470.8 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 ORF87621 - 3.5e-07 29.7 0.0 5.1e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF87621 - 0.00051 19.1 0.0 0.00087 18.3 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V N-glycanase_C PF09113.10 ORF82750 - 2.3e-27 95.4 0.4 3.7e-27 94.8 0.4 1.3 1 0 0 1 1 1 1 Peptide-N-glycosidase F, C terminal TPP_enzyme_N PF02776.18 ORF78173 - 1.8e-48 164.4 0.0 2.8e-48 163.8 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF78173 - 9.6e-34 116.1 0.0 1.9e-33 115.1 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 ORF78173 - 2.9e-05 23.9 0.2 0.00054 19.8 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO_dh PF02552.16 ORF78173 - 0.013 15.3 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_N PF02776.18 ORF60365 - 1.8e-48 164.4 0.0 2.8e-48 163.8 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF60365 - 9.6e-34 116.1 0.0 1.9e-33 115.1 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 ORF60365 - 2.9e-05 23.9 0.2 0.00054 19.8 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO_dh PF02552.16 ORF60365 - 0.013 15.3 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit DUF4116 PF13475.6 ORF56935 - 9.4e-43 143.7 0.0 1.3e-12 47.2 0.0 5.6 4 2 0 4 4 4 4 Domain of unknown function (DUF4116) ubiquitin PF00240.23 ORF56935 - 0.0026 17.5 0.0 0.039 13.7 0.0 2.6 3 0 0 3 3 3 1 Ubiquitin family Glyco_tran_WecB PF03808.13 ORF56935 - 0.015 15.2 0.2 3.2 7.7 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase WecB/TagA/CpsF family Spore_SspJ PF09575.10 ORF56935 - 0.18 12.2 3.1 38 4.8 0.1 4.1 4 0 0 4 4 4 0 Small spore protein J (Spore_SspJ) bPH_6 PF10756.9 ORF56935 - 4.4 7.4 9.3 6.5 6.9 0.0 4.4 3 2 1 4 4 4 0 Bacterial PH domain FAS_N PF17828.1 ORF48017 - 0.09 12.8 0.0 1.1 9.3 0.0 2.2 2 0 0 2 2 2 0 N-terminal domain in fatty acid synthase subunit beta S-antigen PF05756.11 ORF4171 - 0.0018 18.6 0.3 0.0018 18.6 0.3 3.2 3 1 0 3 3 3 1 S-antigen protein ISK_Channel PF02060.15 ORF4171 - 1.2 8.9 7.9 0.15 11.8 0.9 2.6 2 0 0 2 2 2 0 Slow voltage-gated potassium channel Guanylate_cyc PF00211.20 ORF29965 - 2.8e-31 108.6 0.0 4.7e-31 107.8 0.0 1.2 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain LPD5 PF18799.1 ORF25106 - 0.23 11.9 4.9 0.41 11.0 4.9 1.4 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 5 Histidinol_dh PF00815.20 ORF21501 - 5e-166 552.8 2.1 6.1e-166 552.5 2.1 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase FdhE PF04216.12 ORF21501 - 0.042 13.7 0.7 0.1 12.4 0.7 1.6 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HSP70 PF00012.20 ORF16250 - 4.1e-19 68.2 0.0 4.4e-10 38.4 0.0 2.1 2 0 0 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 ORF16250 - 3.3e-09 36.0 0.1 2e-06 26.9 0.0 2.2 2 0 0 2 2 2 2 MreB/Mbl protein StbA PF06406.11 ORF16250 - 0.00099 18.4 0.0 0.018 14.3 0.0 2.6 2 1 0 2 2 2 1 StbA protein Ppx-GppA PF02541.16 ORF16250 - 0.026 14.0 0.1 0.056 12.9 0.1 1.4 1 0 0 1 1 1 0 Ppx/GppA phosphatase family DDR PF08841.10 ORF16250 - 0.03 13.3 0.0 0.15 11.0 0.0 1.8 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain MutL PF13941.6 ORF16250 - 0.088 11.4 0.0 0.2 10.2 0.0 1.5 2 0 0 2 2 2 0 MutL protein AnmK PF03702.14 ORF16250 - 0.089 11.9 0.0 0.18 10.8 0.0 1.4 1 0 0 1 1 1 0 Anhydro-N-acetylmuramic acid kinase EutA PF06277.11 ORF16250 - 0.13 11.1 0.0 0.56 9.0 0.0 1.8 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutA FGGY_C PF02782.16 ORF16250 - 0.15 11.8 0.0 0.4 10.4 0.0 1.7 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain Hydantoinase_A PF01968.18 ORF16250 - 0.17 11.1 0.0 0.61 9.3 0.0 1.8 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase WD40 PF00400.32 ORF104432 - 1.4e-68 225.2 22.8 1.3e-09 38.5 0.4 8.1 8 0 0 8 8 8 8 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF104432 - 2.3e-21 75.9 1.7 0.0014 18.9 0.0 6.8 1 1 6 7 7 7 6 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF104432 - 2.7e-12 46.6 3.7 0.014 14.7 0.0 5.5 4 3 0 4 4 4 4 WD40-like domain Nup160 PF11715.8 ORF104432 - 2.5e-10 39.6 12.7 0.25 10.0 0.0 6.7 1 1 6 7 7 7 5 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 ORF104432 - 1.7e-07 30.6 8.4 0.24 10.3 0.4 5.4 1 1 4 5 5 5 3 WD40 region of Ge1, enhancer of mRNA-decapping protein CEP19 PF14933.6 ORF104432 - 0.002 18.5 0.1 0.002 18.5 0.1 1.5 2 0 0 2 2 2 1 CEP19-like protein WD40_3 PF15911.5 ORF104432 - 0.076 13.0 1.0 5.9 7.0 0.0 3.5 4 0 0 4 4 4 0 WD domain, G-beta repeat 3A PF00803.18 ORF104432 - 0.1 11.9 0.3 25 4.1 0.0 3.2 2 1 1 3 3 3 0 3A/RNA2 movement protein family Methyltransf_25 PF13649.6 ORF9919 - 1.1e-09 38.8 0.1 3e-09 37.4 0.1 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF9919 - 4e-07 30.6 0.0 1e-06 29.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF9919 - 4.2e-05 23.5 0.0 7.2e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF9919 - 0.00057 19.7 0.0 0.00097 19.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF9919 - 0.00063 20.4 0.0 0.0018 19.0 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF9919 - 0.011 15.3 0.0 0.018 14.7 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Glyco_hydro_14 PF01373.17 ORF89980 - 6.5e-105 351.4 0.5 7.4e-105 351.2 0.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 14 Glyco_hydro_35 PF01301.19 ORF89980 - 0.02 14.5 0.0 0.04 13.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyl hydrolases family 35 Glyco_hydro_42 PF02449.15 ORF89980 - 0.1 11.9 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase DUF5305 PF17231.2 ORF84960 - 0.015 14.7 1.6 2.1 7.7 0.0 3.6 4 0 0 4 4 4 0 Family of unknown function (DUF5305) DUF4577 PF15145.6 ORF84960 - 0.023 14.7 0.1 0.023 14.7 0.1 3.0 4 0 0 4 4 4 0 Domain of unknown function (DUF4577) DUF3328 PF11807.8 ORF84960 - 0.056 13.2 1.2 0.54 10.0 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3328) UL45 PF05473.12 ORF84960 - 0.066 12.8 0.4 13 5.4 0.1 2.4 2 0 0 2 2 2 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF872 PF05915.12 ORF84960 - 0.14 12.3 2.9 2 8.6 0.0 3.1 3 0 0 3 3 3 0 Eukaryotic protein of unknown function (DUF872) SIT PF15330.6 ORF84960 - 0.22 12.0 2.8 9.8 6.7 0.0 3.5 3 0 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT DUF2207 PF09972.9 ORF84960 - 9.6 4.8 23.5 0.74 8.5 0.0 4.0 2 1 1 3 3 3 0 Predicted membrane protein (DUF2207) Abhydro_lipase PF04083.16 ORF80983 - 3.5e-15 55.3 0.2 8.9e-15 54.0 0.0 1.8 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF80983 - 1.7e-14 54.1 0.3 4.8e-13 49.3 0.2 2.1 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF80983 - 0.00082 18.7 0.0 0.002 17.5 0.0 1.6 2 1 0 2 2 2 1 Serine aminopeptidase, S33 Cupin_5 PF06172.11 ORF80983 - 0.15 12.2 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 Cupin superfamily (DUF985) Thiolase_N PF00108.23 ORF7891 - 3.6e-62 210.1 3.7 5.5e-62 209.5 3.7 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF7891 - 1.4e-35 121.6 0.1 1.4e-35 121.6 0.1 2.3 3 0 0 3 3 3 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF7891 - 5e-06 26.3 0.5 1e-05 25.3 0.5 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain EF-hand_7 PF13499.6 ORF77462 - 0.03 14.8 0.1 16 6.0 0.0 3.1 3 0 0 3 3 3 0 EF-hand domain pair Pro_isomerase PF00160.21 ORF59942 - 1.8e-44 151.8 0.6 3e-44 151.1 0.1 1.7 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SYF2 PF08231.12 ORF59942 - 7.8e-23 81.6 26.3 7.8e-23 81.6 26.3 3.1 1 1 1 2 2 2 1 SYF2 splicing factor PFO_beta_C PF12367.8 ORF59942 - 0.41 10.8 3.1 0.27 11.4 0.3 2.1 2 0 0 2 2 2 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal DUF3135 PF11333.8 ORF59942 - 0.62 10.4 5.8 4 7.8 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3135) FYVE_2 PF02318.16 ORF59942 - 6.5 7.0 14.1 3.6 7.8 2.4 2.9 2 1 0 2 2 2 0 FYVE-type zinc finger CYTH PF01928.21 ORF46163 - 3.1e-39 134.8 0.0 6e-39 133.8 0.0 1.5 1 0 0 1 1 1 1 CYTH domain DUF758 PF05527.11 ORF46163 - 0.0078 16.2 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF758) RCC1_2 PF13540.6 ORF4468 - 1.6e-20 72.4 38.8 0.0043 16.8 0.1 10.7 10 1 0 10 10 10 9 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF4468 - 0.66 9.9 4.3 9.5 6.2 0.1 4.1 1 1 5 6 6 6 0 Lipocalin / cytosolic fatty-acid binding protein family NEMP PF10225.9 ORF44640 - 2.2 7.9 6.3 0.57 9.8 0.9 2.4 2 0 0 2 2 2 0 NEMP family kleA_kleC PF17383.2 ORF44640 - 8.9 6.7 12.8 2.2 8.7 2.0 2.9 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A DUF2353 PF09789.9 ORF36130 - 0.0022 17.4 0.0 0.0022 17.4 0.0 3.9 2 1 2 4 4 4 1 Uncharacterized coiled-coil protein (DUF2353) DUF4407 PF14362.6 ORF36130 - 0.034 13.5 71.6 1 8.7 28.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) Ten1_2 PF15490.6 ORF36130 - 0.49 10.1 11.7 1.2 8.8 1.6 3.1 2 1 1 3 3 3 0 Telomere-capping, CST complex subunit Ran-binding PF05508.11 ORF36130 - 0.91 8.4 31.7 0.28 10.1 6.1 2.9 1 1 2 3 3 3 0 RanGTP-binding protein DUF724 PF05266.14 ORF36130 - 1.3 8.9 53.9 0.13 12.1 12.2 3.6 2 1 2 4 4 4 0 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF36130 - 6.1 6.9 38.1 7.2 6.7 9.1 3.7 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 ORF36130 - 9.4 6.4 75.9 0.16 12.1 7.9 6.5 3 2 3 6 6 6 0 Centrosome localisation domain of PPC89 MORN PF02493.20 ORF36078 - 1.4e-44 147.4 57.8 4.3e-07 29.4 1.8 10.2 10 0 0 10 10 10 9 MORN repeat Tudor_2 PF18104.1 ORF36078 - 1.9e-06 27.5 8.4 0.42 10.3 0.1 5.5 5 0 0 5 5 5 4 Jumonji domain-containing protein 2A Tudor domain KH_1 PF00013.29 ORF29095 - 0.0026 17.5 0.0 0.0059 16.4 0.0 1.5 1 0 0 1 1 1 1 KH domain Radial_spoke_3 PF06098.11 ORF1936 - 3.9e-60 203.5 19.2 3.9e-60 203.5 19.2 2.0 1 1 1 2 2 2 1 Radial spoke protein 3 ATP-synt PF00231.19 ORF17234 - 7.7e-73 245.6 0.7 9.3e-73 245.4 0.7 1.0 1 0 0 1 1 1 1 ATP synthase DUF3562 PF12085.8 ORF17234 - 0.044 13.4 0.6 0.16 11.6 0.6 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) DAGK_acc PF00609.19 ORF14611 - 5.4e-18 65.8 0.0 9.4e-18 65.1 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain DAGK_cat PF00781.24 ORF14611 - 4.4e-17 61.9 0.0 1.6e-16 60.1 0.0 1.9 1 1 0 1 1 1 1 Diacylglycerol kinase catalytic domain DUF2353 PF09789.9 ORF106308 - 0.0022 17.4 0.0 0.0022 17.4 0.0 3.9 2 1 2 4 4 4 1 Uncharacterized coiled-coil protein (DUF2353) DUF4407 PF14362.6 ORF106308 - 0.034 13.5 71.6 1 8.7 28.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) Ten1_2 PF15490.6 ORF106308 - 0.49 10.1 11.7 1.2 8.8 1.6 3.1 2 1 1 3 3 3 0 Telomere-capping, CST complex subunit Ran-binding PF05508.11 ORF106308 - 0.91 8.4 31.7 0.28 10.1 6.1 2.9 1 1 2 3 3 3 0 RanGTP-binding protein DUF724 PF05266.14 ORF106308 - 1.3 8.9 53.9 0.13 12.1 12.2 3.6 2 1 2 4 4 4 0 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF106308 - 6.1 6.9 38.1 7.2 6.7 9.1 3.7 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 ORF106308 - 9.4 6.4 75.9 0.16 12.1 7.9 6.5 3 2 3 6 6 6 0 Centrosome localisation domain of PPC89 ATP-synt PF00231.19 ORF104693 - 7.7e-73 245.6 0.7 9.3e-73 245.4 0.7 1.0 1 0 0 1 1 1 1 ATP synthase DUF3562 PF12085.8 ORF104693 - 0.044 13.4 0.6 0.16 11.6 0.6 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) LRR_4 PF12799.7 ORF104415 - 3.9e-18 65.3 29.7 4.1e-05 23.8 4.3 5.0 5 0 0 5 5 5 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF104415 - 1.4e-07 31.2 34.1 0.0071 16.1 2.9 5.1 3 1 3 6 6 6 5 Leucine rich repeat LRR_6 PF13516.6 ORF104415 - 0.00019 21.2 15.2 0.45 10.7 0.5 6.0 6 0 0 6 6 6 2 Leucine Rich repeat LRR_9 PF14580.6 ORF104415 - 0.00046 19.7 19.5 0.0011 18.5 1.2 3.4 1 1 2 3 3 3 3 Leucine-rich repeat YjbH PF06082.11 ORF100903 - 5.6e-151 504.6 1.9 6.3e-151 504.4 1.9 1.0 1 0 0 1 1 1 1 Exopolysaccharide biosynthesis protein YbjH ABC_tran PF00005.27 ORF96857 - 2.2e-14 54.1 0.0 1.1e-13 51.9 0.0 2.1 3 0 0 3 3 3 1 ABC transporter AAA_21 PF13304.6 ORF96857 - 2.5e-10 40.7 0.0 9.3e-10 38.8 0.0 1.9 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF96857 - 0.00029 20.3 0.2 0.00088 18.8 0.0 1.8 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain FERM_C PF09380.10 ORF96857 - 0.067 13.6 0.1 0.61 10.5 0.0 2.4 2 0 0 2 2 2 0 FERM C-terminal PH-like domain SbcCD_C PF13558.6 ORF96857 - 0.12 12.6 0.0 1.9 8.8 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DAO PF01266.24 ORF95917 - 3.1e-73 247.4 0.4 3.7e-73 247.1 0.4 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF95917 - 1.7e-07 30.8 0.4 0.00029 20.2 0.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF95917 - 2.1e-07 31.4 0.0 6.1e-05 23.5 0.2 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF95917 - 9.3e-07 27.9 0.2 0.009 14.8 0.0 2.6 3 0 0 3 3 3 2 HI0933-like protein FAD_binding_2 PF00890.24 ORF95917 - 1e-06 28.1 2.1 0.015 14.4 1.5 2.3 2 1 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 ORF95917 - 1.5e-06 28.3 0.0 3.1e-05 24.1 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 ORF95917 - 1.4e-05 24.6 0.0 0.0023 17.3 0.0 2.1 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase ApbA PF02558.16 ORF95917 - 4.4e-05 23.2 0.2 9.6e-05 22.1 0.2 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA AlaDh_PNT_C PF01262.21 ORF95917 - 0.00019 20.8 0.1 0.00033 20.0 0.1 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 ORF95917 - 0.00045 19.9 0.1 0.0008 19.0 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox_3 PF13738.6 ORF95917 - 0.0011 18.3 0.1 0.78 8.9 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF95917 - 0.0024 17.2 0.7 0.016 14.5 0.2 2.0 2 0 0 2 2 2 1 FAD binding domain Trp_halogenase PF04820.14 ORF95917 - 0.003 16.5 0.2 1.7 7.4 0.3 2.3 2 0 0 2 2 2 2 Tryptophan halogenase 3HCDH_N PF02737.18 ORF95917 - 0.0032 17.4 0.6 0.0065 16.4 0.1 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GDI PF00996.18 ORF95917 - 0.012 14.1 0.0 0.047 12.2 0.0 1.7 2 0 0 2 2 2 0 GDP dissociation inhibitor XdhC_C PF13478.6 ORF95917 - 0.019 15.4 0.0 0.095 13.2 0.0 2.2 3 0 0 3 3 2 0 XdhC Rossmann domain TrkA_N PF02254.18 ORF95917 - 0.039 14.2 0.0 0.077 13.3 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain GIDA PF01134.22 ORF95917 - 0.039 13.0 0.5 0.38 9.8 0.4 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_oxidored PF12831.7 ORF95917 - 0.078 12.3 1.3 4.1 6.6 0.4 2.6 2 1 1 3 3 3 0 FAD dependent oxidoreductase NAD_Gly3P_dh_N PF01210.23 ORF95917 - 0.11 12.4 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 ORF95917 - 0.18 12.4 0.0 0.36 11.4 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 ORF95917 - 0.19 12.0 0.1 0.35 11.1 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF4533 PF15047.6 ORF93854 - 0.011 15.4 1.7 0.011 15.4 1.7 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF4533) Dynactin_p22 PF07426.11 ORF93854 - 0.16 11.8 6.1 0.96 9.3 0.3 3.6 3 1 0 3 3 3 0 Dynactin subunit p22 Wbp11 PF09429.10 ORF93854 - 0.35 11.3 0.0 0.35 11.3 0.0 3.0 3 1 0 3 3 3 0 WW domain binding protein 11 GCN5L1 PF06320.13 ORF93854 - 1.9 8.7 6.2 5.2 7.2 0.1 3.8 3 1 1 4 4 4 0 GCN5-like protein 1 (GCN5L1) Cdh1_DBD_1 PF18196.1 ORF93854 - 4.4 7.6 6.0 6.7 7.1 0.3 3.3 3 0 0 3 3 3 0 Chromodomain helicase DNA-binding domain 1 CdvA PF18822.1 ORF93854 - 4.8 7.0 8.0 3.6 7.4 0.0 3.6 4 0 0 4 4 4 0 CdvA-like coiled-coil domain SKA2 PF16740.5 ORF93854 - 8 6.3 14.0 0.55 10.0 0.7 3.9 4 1 0 4 4 4 0 Spindle and kinetochore-associated protein 2 Tyrosinase PF00264.20 ORF86336 - 3.2e-20 73.4 8.1 3.6e-19 69.9 6.7 2.5 2 1 0 2 2 2 1 Common central domain of tyrosinase FAP206 PF12018.8 ORF84679 - 7.1e-57 193.0 0.0 1.2e-56 192.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function Ank_2 PF12796.7 ORF83667 - 6.6e-28 97.1 4.9 8.2e-11 42.3 0.2 3.6 1 1 4 5 5 5 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF83667 - 2e-17 63.3 2.2 2.5e-08 34.3 0.4 3.9 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF83667 - 3.2e-17 62.1 4.6 3.1e-06 27.4 0.1 5.0 5 0 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF83667 - 5.5e-15 54.0 5.0 1.2e-05 25.2 0.0 6.0 6 1 0 6 6 6 3 Ankyrin repeat Ank_5 PF13857.6 ORF83667 - 8.8e-14 51.4 8.4 8e-10 38.8 0.4 3.9 4 0 0 4 4 4 2 Ankyrin repeats (many copies) DUF3447 PF11929.8 ORF83667 - 0.19 11.7 0.0 0.46 10.5 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3447) ATP_bind_3 PF01171.20 ORF75129 - 4.9e-61 205.7 0.0 6.6e-61 205.2 0.0 1.2 1 0 0 1 1 1 1 PP-loop family TilS_C PF11734.8 ORF75129 - 1.4e-26 91.7 0.0 5.2e-26 89.9 0.0 2.0 2 0 0 2 2 2 1 TilS substrate C-terminal domain TilS PF09179.11 ORF75129 - 4.4e-20 71.9 4.2 2.1e-19 69.7 4.2 2.3 1 0 0 1 1 1 1 TilS substrate binding domain tRNA_Me_trans PF03054.16 ORF75129 - 0.00076 18.4 0.0 0.0011 17.9 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase PAPS_reduct PF01507.19 ORF75129 - 0.065 13.3 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Herpes_UL46 PF03387.14 ORF71854 - 0.043 12.5 0.2 4.8 5.8 0.1 2.1 2 0 0 2 2 2 0 Herpesvirus UL46 protein Prismane PF03063.20 ORF67769 - 0.2 10.3 4.8 0.3 9.7 4.8 1.1 1 0 0 1 1 1 0 Prismane/CO dehydrogenase family Pex19 PF04614.12 ORF67769 - 8.3 6.1 17.3 1.3 8.8 6.3 2.3 1 1 1 2 2 2 0 Pex19 protein family Creatinase_N PF01321.18 ORF56443 - 4.9e-16 59.6 0.0 9.8e-16 58.6 0.0 1.5 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Peptidase_M24 PF00557.24 ORF56443 - 8e-15 55.1 0.0 1.2e-14 54.6 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 ACR_tran PF00873.19 ORF56135 - 2e-171 572.0 0.0 2.3e-171 571.9 0.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 ORF56135 - 3.4e-06 26.2 5.4 5.3e-06 25.6 5.4 1.3 1 0 0 1 1 1 1 MMPL family SecD_SecF PF02355.16 ORF56135 - 3.9e-05 23.1 1.2 5.5e-05 22.6 1.2 1.2 1 0 0 1 1 1 1 Protein export membrane protein ADP_ribosyl_GH PF03747.14 ORF50761 - 2.1e-56 191.8 0.9 2.6e-56 191.5 0.9 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase TetR_C_16 PF17920.1 ORF50761 - 0.062 13.5 0.3 4.3 7.6 0.0 2.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks22.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks22.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks22.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks22.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:52:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PRORP PF16953.5 NODE_55392_length_311_cov_88.329710_g47457_i0reverse_frame_3 - 0.014 14.9 0.2 0.017 14.6 0.2 1.0 1 0 0 1 1 1 0 Protein-only RNase P SMYLE_N PF18615.1 NODE_55391_length_311_cov_89.018116_g47456_i0forward_frame_2 - 0.013 15.1 0.9 0.013 15.0 0.9 1.0 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain DUF2892 PF11127.8 NODE_55385_length_311_cov_112.039855_g47450_i0forward_frame_3 - 0.022 14.8 0.1 0.035 14.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) RCC1_2 PF13540.6 NODE_55385_length_311_cov_112.039855_g47450_i0forward_frame_2 - 0.059 13.2 1.6 3.7 7.5 0.2 2.4 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat VF530 PF09905.9 NODE_55381_length_311_cov_146.684783_g47446_i0reverse_frame_2 - 0.1 12.8 0.1 0.16 12.2 0.1 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 PSP1 PF04468.12 NODE_55381_length_311_cov_146.684783_g47446_i0forward_frame_2 - 0.099 12.9 0.5 0.13 12.5 0.5 1.2 1 0 0 1 1 1 0 PSP1 C-terminal conserved region Histone_H2A_C PF16211.5 NODE_55381_length_311_cov_146.684783_g47446_i0forward_frame_2 - 1.1 9.0 5.6 1.9 8.3 5.6 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A Phage_RpbA PF10789.9 NODE_55376_length_311_cov_241.028986_g47441_i0forward_frame_2 - 0.049 13.7 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Phage RNA polymerase binding, RpbA DicB PF05358.11 NODE_55371_length_311_cov_509.931159_g47436_i0reverse_frame_3 - 0.18 12.0 0.1 0.27 11.4 0.1 1.3 1 0 0 1 1 1 0 DicB protein DUF2116 PF09889.9 NODE_55370_length_311_cov_2048.931159_g47435_i0reverse_frame_2 - 0.81 9.7 3.1 3.4 7.7 0.9 2.1 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Hormone_1 PF00103.20 NODE_55369_length_311_cov_2211.036232_g47434_i0forward_frame_2 - 0.016 15.0 0.6 0.019 14.7 0.6 1.1 1 0 0 1 1 1 0 Somatotropin hormone family Ost4 PF10215.9 NODE_55368_length_311_cov_2305.735507_g47433_i0forward_frame_2 - 0.036 13.9 0.0 0.036 13.9 0.0 1.5 2 0 0 2 2 2 0 Oligosaccaryltransferase GnsAB_toxin PF08178.11 NODE_55367_length_311_cov_5216.112319_g47432_i0reverse_frame_2 - 0.011 15.7 0.3 0.018 15.0 0.3 1.4 1 0 0 1 1 1 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system Sensor_TM1 PF13755.6 NODE_55360_length_312_cov_1.328520_g47425_i0forward_frame_2 - 0.16 11.8 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain Ninjurin PF04923.12 NODE_55359_length_312_cov_1.346570_g47424_i0forward_frame_3 - 0.058 13.3 0.7 0.072 13.0 0.7 1.1 1 0 0 1 1 1 0 Ninjurin MogR_DNAbind PF12181.8 NODE_55357_length_312_cov_1.444043_g47422_i0reverse_frame_2 - 0.016 15.1 1.2 0.018 14.9 1.2 1.2 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) 30K_MP_core PF17644.1 NODE_55357_length_312_cov_1.444043_g47422_i0forward_frame_3 - 0.022 14.6 0.2 0.03 14.2 0.2 1.2 1 0 0 1 1 1 0 Core domain of 30K viral movement proteins RPA_interact_M PF14767.6 NODE_55351_length_312_cov_1.602888_g47416_i0forward_frame_2 - 0.043 14.4 0.1 0.05 14.2 0.1 1.2 1 0 0 1 1 1 0 Replication protein A interacting middle NB-LRR PF12061.8 NODE_55349_length_312_cov_1.642599_g47414_i0reverse_frame_2 - 0.002 17.5 0.1 0.0023 17.3 0.1 1.0 1 0 0 1 1 1 1 Late blight resistance protein R1 RVT_1 PF00078.27 NODE_55349_length_312_cov_1.642599_g47414_i0forward_frame_3 - 0.0029 17.1 0.0 0.018 14.5 0.0 1.9 1 1 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) CCDC144C PF14915.6 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.00042 19.5 14.7 0.00048 19.4 14.7 1.1 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region MscS_porin PF12795.7 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.00093 18.8 14.9 0.0015 18.2 14.9 1.4 1 1 0 1 1 1 1 Mechanosensitive ion channel porin domain Bcr-Abl_Oligo PF09036.10 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.13 12.3 1.3 0.54 10.3 0.2 2.1 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain PEP-utilisers_N PF05524.13 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.17 12.1 3.3 0.26 11.5 3.3 1.5 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal Golgin_A5 PF09787.9 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.28 10.6 15.4 0.31 10.5 15.4 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 HAUS6_N PF14661.6 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.69 9.4 9.8 0.75 9.3 9.8 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF745 PF05335.13 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 1 9.0 12.3 3.5 7.3 1.1 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF745) Spc7 PF08317.11 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 2 7.2 15.6 2.3 7.0 15.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein XhlA PF10779.9 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 2.2 8.5 6.6 0.39 10.9 2.6 1.8 2 1 0 2 2 2 0 Haemolysin XhlA FapA PF03961.13 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 2.3 6.7 11.9 2.5 6.6 11.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF620 PF04788.12 NODE_55344_length_312_cov_1.729242_g47409_i0reverse_frame_3 - 0.13 11.7 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF620) Deltaretro_Tax PF05599.11 NODE_55340_length_312_cov_1.812274_g47405_i0reverse_frame_2 - 0.31 11.6 5.3 0.12 13.0 0.8 2.1 2 0 0 2 2 2 0 Deltaretrovirus Tax protein S1 PF00575.23 NODE_55339_length_312_cov_1.924188_g47404_i0forward_frame_3 - 0.05 14.0 0.1 0.067 13.5 0.1 1.2 1 0 0 1 1 1 0 S1 RNA binding domain RVT_2 PF07727.14 NODE_55338_length_312_cov_1.938628_g47403_i0reverse_frame_3 - 2.5e-05 24.0 0.0 3.8e-05 23.4 0.0 1.3 1 1 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF2207 PF09972.9 NODE_55336_length_312_cov_2.061372_g47401_i0forward_frame_2 - 0.0062 15.4 0.1 0.0063 15.3 0.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) PIRT PF15099.6 NODE_55336_length_312_cov_2.061372_g47401_i0forward_frame_2 - 0.048 13.3 0.0 0.052 13.1 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Tho2 PF11262.8 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.0019 17.5 4.5 0.002 17.4 4.5 1.0 1 0 0 1 1 1 1 Transcription factor/nuclear export subunit protein 2 DUF3450 PF11932.8 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.0049 16.2 1.3 0.0058 16.0 1.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) FlxA PF14282.6 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.012 15.6 1.1 0.014 15.3 1.1 1.3 1 0 0 1 1 1 0 FlxA-like protein Peptidase_M41 PF01434.18 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.024 14.5 0.2 0.03 14.2 0.2 1.1 1 0 0 1 1 1 0 Peptidase family M41 Fib_alpha PF08702.10 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.081 13.1 4.6 0.073 13.3 2.2 1.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.096 12.7 1.0 0.13 12.3 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2101 PF09874.9 NODE_55334_length_312_cov_2.079422_g47399_i0forward_frame_3 - 6.3 6.4 10.8 8.6 6.0 10.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Aminopep PF10023.9 NODE_55332_length_312_cov_2.111913_g47397_i0reverse_frame_3 - 0.048 13.0 3.9 0.053 12.9 3.9 1.0 1 0 0 1 1 1 0 Putative aminopeptidase Pex24p PF06398.11 NODE_55332_length_312_cov_2.111913_g47397_i0forward_frame_2 - 0.17 10.9 7.8 0.18 10.7 7.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin RANK_CRD_2 PF18278.1 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 0.022 14.9 1.3 0.022 14.9 1.3 3.4 4 0 0 4 4 4 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 Inhibitor_I42 PF09394.10 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 0.11 12.9 0.1 1.9 8.9 0.0 2.1 2 0 0 2 2 2 0 Chagasin family peptidase inhibitor I42 PRD1_DD PF11087.8 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 0.18 11.5 0.5 9.2 6.0 0.0 2.1 2 0 0 2 2 2 0 PRD1 phage membrane DNA delivery cEGF PF12662.7 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 0.19 11.7 17.6 0.38 10.7 1.4 3.8 4 0 0 4 4 4 0 Complement Clr-like EGF-like zf-RRPl_C4 PF17026.5 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 0.6 10.2 12.0 6.5 6.9 11.9 2.0 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type JAMP PF05571.12 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 2.3 7.8 13.8 2.7 7.5 3.5 2.1 1 1 1 2 2 2 0 JNK1/MAPK8-associated membrane protein PknG_rubred PF16919.5 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 4.7 7.4 12.7 2.8 8.1 0.6 2.9 2 1 1 3 3 3 0 Protein kinase G rubredoxin domain DUF4215 PF13948.6 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 9.8 6.7 20.6 11 6.6 2.2 3.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4215) DUF3450 PF11932.8 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 0.044 13.1 8.8 0.057 12.7 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1501 PF07394.12 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 0.089 11.8 1.9 0.1 11.7 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) CSRNP_N PF16019.5 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 2.5 8.0 7.0 2.7 7.8 7.0 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Atg14 PF10186.9 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 3.2 6.8 14.4 3.8 6.5 14.4 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Sec62 PF03839.16 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 5.4 6.5 10.0 5.7 6.4 10.0 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 TMPIT PF07851.13 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 9.1 5.4 7.7 9.6 5.3 7.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein RVT_1 PF00078.27 NODE_55325_length_312_cov_2.859206_g47390_i0forward_frame_3 - 2.4e-14 53.4 0.0 2.9e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) SulA PF03846.14 NODE_55324_length_312_cov_2.967509_g47389_i0forward_frame_3 - 7.1e-30 103.3 0.9 9.9e-30 102.8 0.9 1.2 1 0 0 1 1 1 1 Cell division inhibitor SulA ORC6 PF05460.13 NODE_55322_length_312_cov_2.981949_g47387_i0reverse_frame_2 - 0.22 10.8 12.1 0.24 10.6 12.1 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) DUF3450 PF11932.8 NODE_55322_length_312_cov_2.981949_g47387_i0reverse_frame_2 - 0.33 10.2 6.4 0.35 10.1 6.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4337 PF14235.6 NODE_55322_length_312_cov_2.981949_g47387_i0reverse_frame_2 - 2.9 8.0 7.8 3.5 7.7 7.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) TMPIT PF07851.13 NODE_55322_length_312_cov_2.981949_g47387_i0reverse_frame_2 - 3.2 6.9 8.9 3.6 6.7 8.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF5588 PF17826.1 NODE_55318_length_312_cov_3.527076_g47383_i0reverse_frame_2 - 0.15 11.0 0.1 0.16 10.8 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5588) MetW PF07021.12 NODE_55316_length_312_cov_4.032491_g47381_i0forward_frame_2 - 0.044 13.4 0.1 0.083 12.5 0.1 1.5 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW LOH1CR12 PF10158.9 NODE_55308_length_312_cov_54.476534_g47373_i0reverse_frame_3 - 0.028 14.4 1.3 0.11 12.6 0.1 1.9 1 1 1 2 2 2 0 Tumour suppressor protein Ribosomal_L21p PF00829.21 NODE_55306_length_312_cov_57.718412_g47371_i0reverse_frame_3 - 0.025 14.8 0.1 0.037 14.3 0.1 1.3 1 0 0 1 1 1 0 Ribosomal prokaryotic L21 protein DUF5420 PF17457.2 NODE_55299_length_312_cov_68.494585_g47364_i0reverse_frame_3 - 0.084 12.8 0.4 0.12 12.3 0.2 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5420) DUF1719 PF08224.11 NODE_55295_length_312_cov_82.826715_g47360_i0forward_frame_2 - 0.16 11.1 0.2 0.17 11.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) DUF1381 PF07129.11 NODE_55294_length_312_cov_83.418773_g47359_i0reverse_frame_3 - 0.064 13.1 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) Phage_Orf51 PF06194.11 NODE_55294_length_312_cov_83.418773_g47359_i0forward_frame_3 - 0.08 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Phage Conserved Open Reading Frame 51 COX14 PF14880.6 NODE_55292_length_312_cov_98.039711_g47357_i0reverse_frame_2 - 0.12 12.3 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 Cytochrome oxidase c assembly DUF5021 PF16424.5 NODE_55289_length_312_cov_103.725632_g47354_i0forward_frame_2 - 0.0052 16.6 0.4 0.0064 16.3 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5021) Ank_4 PF13637.6 NODE_55288_length_312_cov_104.140794_g47353_i0reverse_frame_3 - 1e-05 26.0 0.0 1.6e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_55288_length_312_cov_104.140794_g47353_i0reverse_frame_3 - 0.00032 21.2 0.0 0.00047 20.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_55288_length_312_cov_104.140794_g47353_i0reverse_frame_3 - 0.01 16.2 0.0 0.19 12.1 0.0 1.8 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Ank PF00023.30 NODE_55288_length_312_cov_104.140794_g47353_i0reverse_frame_3 - 0.011 16.1 0.0 4.8 7.8 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeat PH PF00169.29 NODE_55287_length_312_cov_107.101083_g47352_i0forward_frame_2 - 0.0046 17.4 0.2 0.0056 17.2 0.2 1.3 1 1 0 1 1 1 1 PH domain DUF4834 PF16118.5 NODE_55286_length_312_cov_110.151625_g47351_i0forward_frame_2 - 0.082 13.9 0.0 0.1 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Aminotran_MocR PF12897.7 NODE_55285_length_312_cov_115.187726_g47350_i0reverse_frame_2 - 0.062 12.1 0.1 0.063 12.0 0.1 1.0 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase DUF4186 PF13811.6 NODE_55283_length_312_cov_129.501805_g47348_i0forward_frame_2 - 0.14 12.2 3.3 0.16 12.0 2.5 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4186) Glyco_transf_90 PF05686.12 NODE_55281_length_312_cov_142.010830_g47346_i0reverse_frame_2 - 3.1e-09 36.2 0.1 3.7e-09 36.0 0.1 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 90 DUF4943 PF16301.5 NODE_55278_length_312_cov_148.140794_g47343_i0reverse_frame_3 - 0.15 12.1 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4943) Glycoprotein PF03409.15 NODE_55276_length_312_cov_226.162455_g47341_i0forward_frame_3 - 0.12 11.1 0.4 0.12 11.2 0.4 1.1 1 0 0 1 1 1 0 Transmembrane glycoprotein DUF2919 PF11143.8 NODE_55273_length_312_cov_305.086643_g47338_i0reverse_frame_3 - 0.0038 17.6 0.3 0.0045 17.3 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2919) DUF5110 PF17137.4 NODE_55272_length_312_cov_339.566787_g47337_i0forward_frame_3 - 0.025 14.8 1.0 0.049 13.9 1.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5110) PHD_2 PF13831.6 NODE_55269_length_312_cov_720.277978_g47335_i0reverse_frame_3 - 0.02 14.4 0.7 0.029 13.9 0.7 1.3 1 0 0 1 1 1 0 PHD-finger PHD PF00628.29 NODE_55269_length_312_cov_720.277978_g47335_i0reverse_frame_3 - 0.026 14.4 0.4 0.042 13.7 0.4 1.3 1 0 0 1 1 1 0 PHD-finger DUF2618 PF10940.8 NODE_55269_length_312_cov_720.277978_g47335_i0forward_frame_3 - 0.089 12.6 0.5 0.16 11.8 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2618) Somatostatin PF03002.15 NODE_55269_length_312_cov_720.277978_g47335_i0forward_frame_3 - 0.4 10.7 3.1 0.83 9.6 3.1 1.6 1 0 0 1 1 1 0 Somatostatin/Cortistatin family APG6 PF04111.12 ORF98882 - 0.00065 19.7 0.1 0.00092 19.2 0.1 1.3 1 0 0 1 1 1 1 Apg6 BARA domain LSM PF01423.22 ORF98430 - 1.2e-17 63.4 0.2 1.5e-17 63.0 0.2 1.2 1 0 0 1 1 1 1 LSM domain Peripla_BP_6 PF13458.6 ORF9832 - 4.6e-08 33.1 0.0 5e-08 33.0 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 ORF9832 - 0.019 14.1 0.0 0.022 13.9 0.0 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region SARS_X4 PF08779.10 ORF97445 - 0.0039 17.3 0.1 0.0059 16.8 0.0 1.4 1 1 0 1 1 1 1 SARS coronavirus X4 like PetM PF08041.11 ORF97422 - 0.11 12.1 0.2 0.11 12.1 0.2 3.0 3 0 0 3 3 3 0 PetM family of cytochrome b6f complex subunit 7 DUF1576 PF07613.11 ORF97422 - 0.12 11.8 1.1 1.2 8.7 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1576) Transposase_31 PF04754.12 ORF97390 - 1.2e-44 152.4 0.5 1.3e-44 152.2 0.5 1.0 1 0 0 1 1 1 1 Putative transposase, YhgA-like AsmA_2 PF13502.6 ORF96419 - 0.13 11.8 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 AsmA-like C-terminal region FXMRP1_C_core PF12235.8 ORF96289 - 6 7.5 14.1 21 5.7 14.2 1.7 1 1 0 1 1 1 0 Fragile X-related 1 protein core C terminal zf-RING_12 PF17976.1 ORF96133 - 0.036 14.3 0.1 0.069 13.4 0.1 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain ADK PF00406.22 ORF95522 - 0.0098 16.0 0.1 0.011 15.8 0.1 1.2 1 0 0 1 1 1 1 Adenylate kinase Vta1 PF04652.16 ORF95518 - 5.1e-06 26.5 1.8 6.1e-06 26.3 1.8 1.1 1 0 0 1 1 1 1 Vta1 like KxDL PF10241.9 ORF95518 - 0.036 14.3 2.8 0.26 11.6 1.5 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein FliD_N PF02465.18 ORF95518 - 0.16 12.7 1.7 0.16 12.7 0.5 1.6 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Pkinase PF00069.25 ORF95060 - 1.9e-07 30.7 0.0 2.4e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Yip1 PF04893.17 ORF94159 - 2.7e-10 40.2 0.9 3e-10 40.1 0.9 1.0 1 0 0 1 1 1 1 Yip1 domain RGS PF00615.19 ORF93399 - 0.062 13.6 0.1 0.084 13.1 0.1 1.2 1 0 0 1 1 1 0 Regulator of G protein signaling domain DNA_pol3_tau_5 PF12170.8 ORF92056 - 0.11 12.6 1.5 0.12 12.4 1.5 1.1 1 0 0 1 1 1 0 DNA polymerase III tau subunit V interacting with alpha HEAT_2 PF13646.6 ORF9096 - 0.06 13.7 1.1 0.12 12.7 1.1 1.5 1 1 0 1 1 1 0 HEAT repeats HEAT PF02985.22 ORF9096 - 0.12 12.7 1.5 2.1 8.9 0.1 2.4 2 0 0 2 2 2 0 HEAT repeat UEV PF05743.13 ORF90754 - 4e-05 23.5 0.2 4.5e-05 23.3 0.2 1.2 1 0 0 1 1 1 1 UEV domain RWD PF05773.22 ORF90754 - 0.0022 18.3 0.2 0.0026 18.0 0.2 1.2 1 0 0 1 1 1 1 RWD domain UQ_con PF00179.26 ORF90754 - 0.063 12.9 0.0 0.063 12.9 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-conjugating enzyme Isy1 PF06246.12 ORF90001 - 0.046 13.3 0.0 0.046 13.3 0.0 1.1 1 0 0 1 1 1 0 Isy1-like splicing family LRR_4 PF12799.7 ORF89916 - 5.5e-07 29.8 0.3 0.00093 19.5 0.1 2.6 1 1 1 3 3 3 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF89916 - 4.3e-06 26.4 1.0 0.0014 18.4 0.1 2.3 1 1 1 2 2 2 2 Leucine rich repeat LRR_6 PF13516.6 ORF89916 - 0.0001 22.1 0.2 2.1 8.6 0.0 3.3 3 0 0 3 3 3 3 Leucine Rich repeat LRR_1 PF00560.33 ORF89916 - 0.011 16.2 0.3 15 6.6 0.0 3.6 1 1 1 2 2 2 0 Leucine Rich Repeat DNA_III_psi PF03603.13 ORF89474 - 0.09 13.0 0.0 0.13 12.5 0.0 1.3 1 1 0 1 1 1 0 DNA polymerase III psi subunit DUF2013 PF09431.10 ORF89474 - 0.11 12.7 1.2 0.12 12.6 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2013) DUF866 PF05907.13 ORF89385 - 3.2e-28 98.6 1.2 3.4e-28 98.5 1.2 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF866) Casein_kappa PF00997.18 ORF89237 - 0.13 12.4 0.3 0.15 12.2 0.3 1.1 1 0 0 1 1 1 0 Kappa casein NinF PF05810.12 ORF87931 - 0.055 13.3 1.2 0.12 12.2 1.2 1.6 1 0 0 1 1 1 0 NinF protein Lac_bphage_repr PF06543.12 ORF87527 - 0.013 15.4 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor 2OG-FeII_Oxy_3 PF13640.6 ORF87410 - 4.6e-12 46.7 0.0 5.5e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF87410 - 0.00017 22.0 0.0 0.00021 21.7 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF4504 PF14953.6 ORF87152 - 0.099 12.0 2.2 0.11 11.9 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4504) CPP1-like PF11833.8 ORF87152 - 3.8 7.1 5.4 4.6 6.9 5.4 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like PseudoU_synth_2 PF00849.22 ORF87014 - 1.8e-06 28.1 0.8 1.8e-06 28.1 0.1 1.4 2 0 0 2 2 2 1 RNA pseudouridylate synthase Amdase PF17645.1 ORF86800 - 2.8e-09 36.9 0.0 3e-09 36.8 0.0 1.0 1 0 0 1 1 1 1 Arylmalonate decarboxylase Asp_Glu_race PF01177.22 ORF86800 - 0.016 15.1 0.0 0.018 14.9 0.0 1.1 1 0 0 1 1 1 0 Asp/Glu/Hydantoin racemase PsbX PF06596.11 ORF86800 - 0.12 12.4 0.2 21 5.2 0.0 2.5 3 0 0 3 3 3 0 Photosystem II reaction centre X protein (PsbX) Phage_TAC_11 PF11836.8 ORF85986 - 0.016 15.3 0.5 0.02 15.0 0.5 1.2 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 cNMP_binding PF00027.29 ORF85100 - 6e-05 23.0 0.0 8.2e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Phage_int_SAM_5 PF13102.6 ORF85100 - 0.00069 19.9 0.5 0.00087 19.6 0.5 1.3 1 0 0 1 1 1 1 Phage integrase SAM-like domain AvrM-A PF18241.1 ORF85100 - 0.022 15.2 0.7 0.026 14.9 0.7 1.1 1 0 0 1 1 1 0 Flax-rust effector AvrM-A Methyltransf_4 PF02390.17 ORF84700 - 8.1e-32 110.1 0.0 8.9e-32 109.9 0.0 1.0 1 0 0 1 1 1 1 Putative methyltransferase O-antigen_lig PF13425.6 ORF83461 - 0.8 8.4 4.4 0.89 8.3 4.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein GIY-YIG PF01541.24 ORF83338 - 4e-13 49.4 0.0 4.8e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 GIY-YIG catalytic domain Pribosyltran PF00156.27 ORF83234 - 0.00055 19.5 0.0 0.00076 19.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain DAGK_cat PF00781.24 ORF82967 - 2.3e-06 27.3 0.0 3.8e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain CH_2 PF06294.11 ORF82967 - 0.085 13.0 0.0 0.14 12.3 0.0 1.6 2 1 0 2 2 2 0 CH-like domain in sperm protein PepSY_TM PF03929.16 ORF82967 - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 PepSY-associated TM region PhoLip_ATPase_C PF16212.5 ORF82394 - 0.02 14.7 0.1 0.021 14.6 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF82394 - 0.066 13.1 0.1 0.091 12.6 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain TauE PF01925.19 ORF82309 - 1.6e-12 47.6 4.5 1.8e-12 47.4 4.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE NUDIX PF00293.28 ORF8197 - 0.013 15.6 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 NUDIX domain HopA1 PF17914.1 ORF8197 - 0.06 13.1 0.0 0.24 11.1 0.0 1.8 2 0 0 2 2 2 0 HopA1 effector protein family Nnf1 PF03980.14 ORF816 - 0.017 15.5 0.8 0.031 14.7 0.8 1.6 1 1 0 1 1 1 0 Nnf1 DUF5089 PF17002.5 ORF816 - 0.057 13.3 4.7 0.1 12.5 4.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5089) HMD PF03201.16 ORF81460 - 0.036 14.3 0.0 0.048 13.9 0.0 1.1 1 0 0 1 1 1 0 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase Dsl1_N PF11988.8 ORF81413 - 0.028 13.4 2.5 0.031 13.2 2.5 1.1 1 0 0 1 1 1 0 Retrograde transport protein Dsl1 N terminal Lon_2 PF13337.6 ORF81413 - 0.089 11.3 1.8 0.097 11.2 1.8 1.0 1 0 0 1 1 1 0 Putative ATP-dependent Lon protease VHS PF00790.19 ORF81201 - 0.056 13.3 0.1 0.092 12.6 0.1 1.3 1 0 0 1 1 1 0 VHS domain PDEase_I_N PF08499.12 ORF81201 - 0.071 13.0 0.6 0.11 12.3 0.2 1.5 2 0 0 2 2 2 0 3'5'-cyclic nucleotide phosphodiesterase N-terminal DUF2207 PF09972.9 ORF81186 - 0.00042 19.2 0.0 0.00047 19.0 0.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF3671 PF12420.8 ORF81186 - 0.00046 20.2 0.0 0.00054 20.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function TMEM154 PF15102.6 ORF81186 - 0.0029 17.5 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 TMEM154 protein family DUF3899 PF13038.6 ORF81186 - 0.0037 17.7 0.0 0.006 17.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3899) DUF2140 PF09911.9 ORF81186 - 0.0054 16.3 0.1 0.0077 15.8 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2140) DUF5385 PF17359.2 ORF81186 - 0.0087 15.6 0.1 0.013 15.1 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5385) BatD PF13584.6 ORF81186 - 0.0092 14.8 0.0 0.0099 14.7 0.0 1.0 1 0 0 1 1 1 1 Oxygen tolerance ATG27 PF09451.10 ORF81186 - 0.011 15.6 0.1 0.014 15.2 0.1 1.2 1 0 0 1 1 1 0 Autophagy-related protein 27 DUF5305 PF17231.2 ORF81186 - 0.016 14.7 0.0 0.018 14.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4577 PF15145.6 ORF81186 - 0.027 14.5 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) SIT PF15330.6 ORF81186 - 0.029 14.8 0.0 0.045 14.2 0.0 1.3 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT Orf78 PF06024.12 ORF81186 - 0.051 13.9 0.0 0.062 13.6 0.0 1.2 1 0 0 1 1 1 0 Orf78 (ac78) DUF2615 PF11027.8 ORF81186 - 0.09 12.9 0.0 0.12 12.6 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) Tetraspanin PF00335.20 ORF81186 - 0.098 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF4834 PF16118.5 ORF81186 - 0.1 13.6 1.0 0.13 13.2 0.2 1.6 2 0 0 2 2 1 0 Domain of unknown function (DUF4834) DUF4330 PF14221.6 ORF81186 - 0.14 12.4 0.1 0.2 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) DUF2973 PF11189.8 ORF81186 - 0.15 12.2 0.1 0.22 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) TMCO5 PF14992.6 ORF81186 - 0.16 11.5 0.1 0.19 11.3 0.1 1.1 1 0 0 1 1 1 0 TMCO5 family Baculo_F PF12259.8 ORF81186 - 0.2 10.2 0.0 0.2 10.1 0.0 1.0 1 0 0 1 1 1 0 Baculovirus F protein SARAF PF06682.12 ORF81186 - 0.21 11.2 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis FeoB_associated PF12669.7 ORF81186 - 0.21 12.0 0.6 0.31 11.5 0.6 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein OATP PF03137.20 ORF81186 - 0.22 9.8 0.0 0.21 9.9 0.0 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Wzy_C PF04932.15 ORF81186 - 0.22 11.2 2.8 0.27 10.8 2.8 1.1 1 0 0 1 1 1 0 O-Antigen ligase PsbW PF07123.12 ORF81186 - 0.22 11.5 0.1 0.32 11.0 0.1 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) Shisa PF13908.6 ORF81186 - 0.23 11.7 0.0 0.26 11.5 0.0 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF4685 PF15737.5 ORF8040 - 0.017 15.6 0.1 0.02 15.3 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4685) DUF4446 PF14584.6 ORF8040 - 0.14 12.1 0.9 0.18 11.8 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) zf-CDGSH PF09360.10 ORF80331 - 2.7e-12 46.7 0.8 4.4e-12 46.0 0.2 1.7 2 0 0 2 2 2 1 Iron-binding zinc finger CDGSH type zf-LITAF-like PF10601.9 ORF80142 - 0.46 10.8 9.8 0.38 11.0 6.9 2.0 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Exonuc_X-T_C PF08411.10 ORF80091 - 3.6e-31 108.3 0.0 4.2e-31 108.1 0.0 1.1 1 0 0 1 1 1 1 Exonuclease C-terminal DUF4408 PF14364.6 ORF7997 - 0.75 9.6 2.5 1.6 8.5 2.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4408) Peripla_BP_4 PF13407.6 ORF79717 - 0.00028 20.5 2.0 0.00031 20.4 2.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Glyco_hydro_59 PF02057.15 ORF79717 - 0.048 12.9 0.1 0.048 12.9 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 FlgT_M PF16539.5 ORF79717 - 0.073 13.2 0.1 0.081 13.1 0.1 1.1 1 0 0 1 1 1 0 Flagellar assembly protein T, middle domain RE_TdeIII PF09520.10 ORF79717 - 0.084 12.5 0.2 0.091 12.4 0.2 1.1 1 0 0 1 1 1 0 Type II restriction endonuclease, TdeIII Helicase_C PF00271.31 ORF78854 - 3.2e-20 72.5 0.1 4.7e-20 72.0 0.1 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Mfa1 PF17445.2 ORF77876 - 0.074 13.1 0.3 0.13 12.3 0.3 1.4 1 0 0 1 1 1 0 Mating factor A1 DUF3050 PF11251.8 ORF76539 - 0.0036 17.0 0.5 0.0041 16.8 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3050) CCDC50_N PF15295.6 ORF76539 - 0.0058 16.8 2.9 0.0079 16.3 2.9 1.2 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 50 N-terminus VIT1 PF01988.19 ORF76539 - 0.46 10.3 0.9 0.47 10.3 0.9 1.0 1 0 0 1 1 1 0 VIT family RuvC PF02075.17 ORF76465 - 5.4e-35 120.5 3.6 6.5e-35 120.2 3.6 1.1 1 0 0 1 1 1 1 Crossover junction endodeoxyribonuclease RuvC NeuB PF03102.14 ORF76465 - 0.014 14.9 0.1 0.015 14.8 0.1 1.0 1 0 0 1 1 1 0 NeuB family Na_Ala_symp PF01235.17 ORF75582 - 0.18 11.0 0.1 0.23 10.7 0.1 1.1 1 0 0 1 1 1 0 Sodium:alanine symporter family zf-RING_2 PF13639.6 ORF75312 - 0.19 12.1 11.6 0.11 12.8 1.2 2.4 1 1 1 2 2 2 0 Ring finger domain Dynein_light PF01221.18 ORF75269 - 9.2e-21 74.0 0.0 1.1e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 DUF2207 PF09972.9 ORF75135 - 0.00042 19.2 0.0 0.00047 19.0 0.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF3671 PF12420.8 ORF75135 - 0.00046 20.2 0.0 0.00054 20.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function TMEM154 PF15102.6 ORF75135 - 0.0029 17.5 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 TMEM154 protein family DUF3899 PF13038.6 ORF75135 - 0.0037 17.7 0.0 0.006 17.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3899) DUF2140 PF09911.9 ORF75135 - 0.0054 16.3 0.1 0.0077 15.8 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2140) DUF5385 PF17359.2 ORF75135 - 0.0087 15.6 0.1 0.013 15.1 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5385) BatD PF13584.6 ORF75135 - 0.0092 14.8 0.0 0.0099 14.7 0.0 1.0 1 0 0 1 1 1 1 Oxygen tolerance ATG27 PF09451.10 ORF75135 - 0.011 15.6 0.1 0.014 15.2 0.1 1.2 1 0 0 1 1 1 0 Autophagy-related protein 27 DUF5305 PF17231.2 ORF75135 - 0.016 14.7 0.0 0.018 14.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4577 PF15145.6 ORF75135 - 0.027 14.5 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) SIT PF15330.6 ORF75135 - 0.029 14.8 0.0 0.045 14.2 0.0 1.3 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT Orf78 PF06024.12 ORF75135 - 0.051 13.9 0.0 0.062 13.6 0.0 1.2 1 0 0 1 1 1 0 Orf78 (ac78) DUF2615 PF11027.8 ORF75135 - 0.09 12.9 0.0 0.12 12.6 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) Tetraspanin PF00335.20 ORF75135 - 0.098 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF4834 PF16118.5 ORF75135 - 0.1 13.6 1.0 0.13 13.2 0.2 1.6 2 0 0 2 2 1 0 Domain of unknown function (DUF4834) DUF4330 PF14221.6 ORF75135 - 0.14 12.4 0.1 0.2 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) DUF2973 PF11189.8 ORF75135 - 0.15 12.2 0.1 0.22 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) TMCO5 PF14992.6 ORF75135 - 0.16 11.5 0.1 0.19 11.3 0.1 1.1 1 0 0 1 1 1 0 TMCO5 family Baculo_F PF12259.8 ORF75135 - 0.2 10.2 0.0 0.2 10.1 0.0 1.0 1 0 0 1 1 1 0 Baculovirus F protein SARAF PF06682.12 ORF75135 - 0.21 11.2 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis FeoB_associated PF12669.7 ORF75135 - 0.21 12.0 0.6 0.31 11.5 0.6 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein OATP PF03137.20 ORF75135 - 0.22 9.8 0.0 0.21 9.9 0.0 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Wzy_C PF04932.15 ORF75135 - 0.22 11.2 2.8 0.27 10.8 2.8 1.1 1 0 0 1 1 1 0 O-Antigen ligase PsbW PF07123.12 ORF75135 - 0.22 11.5 0.1 0.32 11.0 0.1 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) Shisa PF13908.6 ORF75135 - 0.23 11.7 0.0 0.26 11.5 0.0 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Pigment_DH PF06324.11 ORF75064 - 0.11 12.7 0.1 0.19 11.9 0.1 1.4 1 0 0 1 1 1 0 Pigment-dispersing hormone (PDH) NSP2_assoc PF14758.6 ORF74750 - 0.062 13.6 0.2 0.08 13.3 0.2 1.1 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein MLANA PF14991.6 ORF74066 - 0.17 12.2 0.0 0.22 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein melan-A TauE PF01925.19 ORF73478 - 1.6e-12 47.6 4.5 1.8e-12 47.4 4.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE PhoLip_ATPase_C PF16212.5 ORF73446 - 0.024 14.4 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF73446 - 0.061 13.2 0.0 0.1 12.5 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain DUF3291 PF11695.8 ORF73268 - 0.12 12.1 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3291) NikR_C PF08753.11 ORF72970 - 0.18 12.0 0.2 0.26 11.4 0.2 1.3 1 0 0 1 1 1 0 NikR C terminal nickel binding domain COPI_assoc PF08507.10 ORF72940 - 5.5e-07 29.7 0.1 6.2e-07 29.5 0.1 1.0 1 0 0 1 1 1 1 COPI associated protein SseC PF04888.12 ORF72940 - 0.0002 21.1 2.1 0.00024 20.8 2.1 1.1 1 0 0 1 1 1 1 Secretion system effector C (SseC) like family YtxH PF12732.7 ORF72940 - 0.0015 19.1 0.8 0.0021 18.6 0.8 1.3 1 0 0 1 1 1 1 YtxH-like protein SMP_2 PF10144.9 ORF72940 - 0.0049 16.5 0.0 0.006 16.3 0.0 1.1 1 0 0 1 1 1 1 Bacterial virulence factor haemolysin SIMPL PF04402.14 ORF72940 - 0.016 15.7 0.7 0.017 15.6 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF541) Grg1 PF11034.8 ORF72940 - 0.08 13.2 7.5 0.17 12.1 7.5 1.6 1 1 0 1 1 1 0 Glucose-repressible protein Grg1 Dynein_light PF01221.18 ORF72940 - 0.16 12.3 3.8 0.27 11.6 3.8 1.3 1 0 0 1 1 1 0 Dynein light chain type 1 Serinc PF03348.15 ORF72940 - 0.65 8.9 2.7 0.75 8.7 1.4 1.6 1 1 1 2 2 2 0 Serine incorporator (Serinc) HK97-gp10_like PF04883.12 ORF72940 - 1.7 9.6 6.4 3.3 8.8 6.4 1.5 1 1 0 1 1 1 0 Bacteriophage HK97-gp10, putative tail-component Antimicrobial_2 PF08023.12 ORF72940 - 3.1 8.4 5.9 49 4.6 5.9 2.4 1 1 0 1 1 1 0 Frog antimicrobial peptide DUF1148 PF06618.11 ORF72262 - 0.018 15.2 0.8 0.023 14.9 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1148) IL32 PF15225.6 ORF7209 - 0.027 14.8 2.1 0.037 14.4 2.1 1.3 1 0 0 1 1 1 0 Interleukin 32 AKNA PF12443.8 ORF70519 - 0.074 13.7 0.3 0.15 12.7 0.3 1.4 1 0 0 1 1 1 0 AT-hook-containing transcription factor PhoLip_ATPase_C PF16212.5 ORF6981 - 0.02 14.7 0.1 0.021 14.6 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF6981 - 0.06 13.2 0.1 0.084 12.8 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Pigment_DH PF06324.11 ORF69622 - 0.11 12.7 0.1 0.19 11.9 0.1 1.4 1 0 0 1 1 1 0 Pigment-dispersing hormone (PDH) Vta1 PF04652.16 ORF69363 - 5.1e-06 26.5 1.8 6.1e-06 26.3 1.8 1.1 1 0 0 1 1 1 1 Vta1 like KxDL PF10241.9 ORF69363 - 0.036 14.3 2.8 0.26 11.6 1.5 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein FliD_N PF02465.18 ORF69363 - 0.16 12.7 1.7 0.16 12.7 0.5 1.6 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DEC-1_N PF04625.13 ORF69226 - 0.064 12.3 1.4 0.062 12.3 1.4 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region NADH-G_4Fe-4S_3 PF10588.9 ORF69021 - 0.26 10.8 2.5 0.63 9.6 2.5 1.7 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PhoLip_ATPase_C PF16212.5 ORF68803 - 0.024 14.4 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF68803 - 0.061 13.2 0.0 0.1 12.5 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain DUF3576 PF12100.8 ORF68598 - 0.035 14.2 0.8 0.035 14.2 0.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3576) Beta-prism_lec PF16458.5 ORF68598 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 1 0 1 1 1 0 Beta-prism lectin Ufd2P_core PF10408.9 ORF6633 - 0.0011 17.7 0.0 0.0012 17.5 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin elongating factor core TSP_3 PF02412.18 ORF65174 - 0.034 13.8 0.3 0.05 13.3 0.3 1.3 1 0 0 1 1 1 0 Thrombospondin type 3 repeat DAGK_cat PF00781.24 ORF64907 - 2.3e-06 27.3 0.0 3.8e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain CH_2 PF06294.11 ORF64907 - 0.085 13.0 0.0 0.14 12.3 0.0 1.6 2 1 0 2 2 2 0 CH-like domain in sperm protein PepSY_TM PF03929.16 ORF64907 - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 PepSY-associated TM region Pollen_allerg_1 PF01357.21 ORF64713 - 0.071 13.1 0.0 0.096 12.7 0.0 1.2 1 0 0 1 1 1 0 Pollen allergen Phage_TAC_11 PF11836.8 ORF64457 - 0.016 15.3 0.5 0.02 15.0 0.5 1.2 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 DUF3694 PF12473.8 ORF6425 - 0.043 14.5 0.0 0.045 14.4 0.0 1.1 1 0 0 1 1 1 0 Kinesin protein IMPDH PF00478.25 ORF63806 - 0.00051 19.1 0.3 0.00054 19.1 0.3 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain Methyltransf_34 PF11312.8 ORF63806 - 0.11 11.7 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase DUF3576 PF12100.8 ORF63582 - 0.035 14.2 0.8 0.035 14.2 0.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3576) Beta-prism_lec PF16458.5 ORF63582 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 1 0 1 1 1 0 Beta-prism lectin DUF4385 PF14328.6 ORF63504 - 0.073 13.1 2.5 0.13 12.4 2.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4385) Ank_4 PF13637.6 ORF62426 - 6.3e-15 55.3 1.0 1.2e-08 35.4 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF62426 - 2.3e-08 33.6 0.7 0.00022 21.4 0.1 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF62426 - 1.3e-06 28.6 0.2 6.3e-05 23.3 0.1 2.5 2 0 0 2 2 2 1 Ankyrin repeat Ank_5 PF13857.6 ORF62426 - 2.8e-06 27.5 0.1 4.1e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF62426 - 4.9e-06 27.1 1.7 1.1e-05 26.0 1.7 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) TAL_FSA PF00923.19 ORF62426 - 0.027 13.8 0.1 0.034 13.5 0.1 1.1 1 0 0 1 1 1 0 Transaldolase/Fructose-6-phosphate aldolase Ank_5 PF13857.6 ORF61622 - 0.037 14.4 0.0 0.065 13.6 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 ORF61622 - 0.1 13.1 0.0 0.23 12.0 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeat Ank_2 PF12796.7 ORF61622 - 0.13 12.9 0.0 0.21 12.2 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ubiq-Cytc-red_N PF09165.10 ORF615 - 0.071 14.0 1.5 0.22 12.5 1.5 1.9 1 1 0 1 1 1 0 Ubiquinol-cytochrome c reductase 8 kDa, N-terminal HTH_Tnp_1 PF01527.20 ORF61296 - 6.2e-10 39.3 0.9 8.1e-10 38.9 0.9 1.2 1 0 0 1 1 1 1 Transposase HTH_28 PF13518.6 ORF61296 - 2.2e-07 30.9 0.0 4.3e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF61296 - 2.6e-05 23.9 0.1 0.00013 21.6 0.2 2.0 2 0 0 2 2 2 1 Homeodomain-like domain TSC22 PF01166.18 ORF61296 - 0.00037 20.7 0.7 0.0013 19.0 0.9 1.8 2 0 0 2 2 2 1 TSC-22/dip/bun family Sigma70_r4_2 PF08281.12 ORF61296 - 0.027 14.1 1.4 0.028 14.1 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 Abhydrolase_9 PF10081.9 ORF61296 - 0.042 12.9 0.0 0.047 12.8 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta-hydrolase family HTH_29 PF13551.6 ORF61296 - 0.049 13.7 0.1 0.07 13.2 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HA PF03457.14 ORF61296 - 0.057 13.7 0.1 0.086 13.2 0.1 1.3 1 0 0 1 1 1 0 Helicase associated domain Chibby PF14645.6 ORF61296 - 0.087 13.2 0.4 0.13 12.7 0.4 1.4 1 1 0 1 1 1 0 Chibby family Exonuc_VII_S PF02609.16 ORF61296 - 0.087 12.9 0.8 0.3 11.2 0.5 1.9 2 0 0 2 2 2 0 Exonuclease VII small subunit DivIC PF04977.15 ORF61296 - 0.14 12.0 1.7 0.19 11.5 1.7 1.4 1 1 0 1 1 1 0 Septum formation initiator Surfac_D-trimer PF09006.11 ORF61296 - 0.18 11.7 0.4 0.37 10.7 0.4 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Ceramidase_alk PF04734.13 ORF61280 - 0.11 11.1 0.2 0.13 10.9 0.2 1.0 1 0 0 1 1 1 0 Neutral/alkaline non-lysosomal ceramidase, N-terminal RNA_pol_Rpb1_6 PF04992.14 ORF60802 - 0.0033 17.3 2.2 0.0041 17.0 2.2 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 6 YfhD PF14151.6 ORF60802 - 8.5 6.6 7.3 2.1 8.5 2.9 2.3 1 1 1 3 3 3 0 YfhD-like protein Cys_rich_KTR PF14205.6 ORF60546 - 0.047 13.5 0.6 0.066 13.0 0.6 1.2 1 0 0 1 1 1 0 Cysteine-rich KTR Cyt-b5 PF00173.28 ORF60419 - 2.9e-09 36.9 0.0 3.4e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain PhoLip_ATPase_C PF16212.5 ORF60322 - 0.021 14.6 0.1 0.023 14.4 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF60322 - 0.04 13.8 0.1 0.056 13.3 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain EF-hand_1 PF00036.32 ORF59986 - 5.2e-05 22.5 0.0 0.0001 21.5 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF59986 - 0.00012 22.5 0.3 0.06 13.8 0.0 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF59986 - 0.0044 16.5 0.0 0.0078 15.7 0.0 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF59986 - 0.0093 15.8 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF59986 - 0.013 15.3 0.0 0.026 14.4 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair Cgr1 PF03879.14 ORF59027 - 0.48 10.8 8.3 0.69 10.3 8.3 1.3 1 1 0 1 1 1 0 Cgr1 family AP2 PF00847.20 ORF58994 - 3.2e-07 30.5 0.3 4.4e-07 30.0 0.3 1.2 1 0 0 1 1 1 1 AP2 domain ASCH PF04266.14 ORF58492 - 9.5e-16 58.3 0.1 1.1e-15 58.2 0.1 1.0 1 0 0 1 1 1 1 ASCH domain DUF3850 PF12961.7 ORF58492 - 0.0003 20.8 0.3 0.0005 20.1 0.3 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF3850) IPT PF01745.16 ORF58492 - 0.092 12.1 0.0 0.097 12.0 0.0 1.1 1 0 0 1 1 1 0 Isopentenyl transferase UCH PF00443.29 ORF57788 - 1.4e-23 83.7 0.3 1.6e-23 83.5 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF57788 - 2.9e-05 23.8 0.0 3.4e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase RRM_1 PF00076.22 ORF57745 - 0.00056 19.7 0.1 0.00097 18.9 0.1 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MobA_MobL PF03389.15 ORF56333 - 0.058 13.1 0.1 0.073 12.8 0.1 1.1 1 0 0 1 1 1 0 MobA/MobL family IL5 PF02025.15 ORF56245 - 0.019 15.3 0.1 0.025 14.9 0.1 1.4 1 1 0 1 1 1 0 Interleukin 5 DAGK_cat PF00781.24 ORF56076 - 2.3e-06 27.3 0.0 3.8e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain CH_2 PF06294.11 ORF56076 - 0.085 13.0 0.0 0.14 12.3 0.0 1.6 2 1 0 2 2 2 0 CH-like domain in sperm protein PepSY_TM PF03929.16 ORF56076 - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 PepSY-associated TM region Dynein_light PF01221.18 ORF55699 - 9.2e-21 74.0 0.0 1.1e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 Kelch_5 PF13854.6 ORF55297 - 0.0011 18.9 0.0 0.0018 18.2 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 ORF55297 - 0.0051 17.1 0.2 0.023 15.0 0.0 1.9 1 1 1 2 2 2 1 Kelch motif Kelch_2 PF07646.15 ORF55297 - 0.041 13.9 0.2 1.1 9.4 0.0 2.2 2 0 0 2 2 2 0 Kelch motif Kelch_1 PF01344.25 ORF55297 - 0.14 11.7 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_3 PF13415.6 ORF55297 - 0.36 11.2 1.7 11 6.5 0.1 2.6 3 0 0 3 3 3 0 Galactose oxidase, central domain DUF1499 PF07386.11 ORF55251 - 2.2e-10 41.1 0.0 2.8e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) Phage_FRD3 PF05798.11 ORF55251 - 0.1 12.9 0.0 0.16 12.3 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage FRD3 protein WD40 PF00400.32 ORF55002 - 5.2e-06 27.1 0.1 0.05 14.5 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF55002 - 0.039 14.2 1.0 0.74 10.2 0.1 2.0 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Tom22 PF04281.13 ORF54802 - 0.12 12.2 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 Ferritin-like PF12902.7 ORF54694 - 0.1 12.4 1.2 0.11 12.4 1.2 1.1 1 0 0 1 1 1 0 Ferritin-like DUF1064 PF06356.11 ORF54501 - 0.037 14.4 3.5 0.046 14.1 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1064) TPR_2 PF07719.17 ORF53366 - 6.7e-07 28.9 0.2 0.00035 20.5 0.0 3.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF53366 - 6.8e-07 28.8 0.5 0.00033 20.4 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF53366 - 3.4e-06 26.8 0.7 0.001 19.1 0.0 3.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF53366 - 0.0043 17.5 0.0 0.016 15.7 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF53366 - 0.033 14.4 0.4 0.47 10.7 0.1 2.3 1 1 2 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 Com_YlbF PF06133.11 ORF53366 - 0.039 14.6 1.3 0.085 13.5 0.2 1.8 2 0 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA Fis1_TPR_C PF14853.6 ORF53366 - 0.077 13.1 0.2 1.3 9.2 0.0 2.6 2 1 1 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat TPR_16 PF13432.6 ORF53366 - 0.19 12.4 0.0 7.8 7.2 0.0 2.4 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF53366 - 0.21 12.5 0.0 1.4 9.9 0.0 2.1 3 0 0 3 3 3 0 Tetratricopeptide repeat F_bP_aldolase PF01116.20 ORF53283 - 1.1e-26 93.9 0.0 1.2e-26 93.8 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II FMN_dh PF01070.18 ORF53283 - 0.047 12.7 0.0 0.071 12.1 0.0 1.3 1 0 0 1 1 1 0 FMN-dependent dehydrogenase DUF2437 PF10370.9 ORF52120 - 0.094 13.6 0.2 1.5 9.8 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF2437) DNA_methylase PF00145.17 ORF52016 - 0.00058 19.3 0.0 0.0007 19.0 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase FAS_meander PF17951.1 ORF51181 - 0.15 11.9 0.1 0.26 11.1 0.1 1.3 1 1 0 1 1 1 0 Fatty acid synthase meander beta sheet domain SpoIIID PF12116.8 ORF50606 - 0.0026 17.8 0.2 0.011 15.8 0.0 1.9 1 1 1 2 2 2 1 Stage III sporulation protein D p450 PF00067.22 ORF5050 - 3.9e-18 65.5 0.2 4.1e-18 65.4 0.2 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF333 PF03891.15 ORF50482 - 0.23 11.7 1.6 43 4.4 0.1 2.7 1 1 3 4 4 4 0 Domain of unknown function (DUF333) EF-hand_6 PF13405.6 ORF4969 - 0.00021 21.0 1.8 0.19 11.7 0.5 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF4969 - 0.014 15.9 3.0 0.043 14.3 2.2 2.1 1 1 1 2 2 2 0 EF-hand domain pair THP2 PF09432.10 ORF4969 - 0.026 14.6 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 Tho complex subunit THP2 EF-hand_5 PF13202.6 ORF4969 - 0.051 13.1 0.2 2.9 7.5 0.0 2.6 2 0 0 2 2 2 0 EF hand EF-hand_1 PF00036.32 ORF4969 - 0.12 11.9 2.4 5.3 6.8 0.0 2.9 2 1 0 2 2 2 0 EF hand zf-RING_2 PF13639.6 ORF47736 - 0.19 12.1 11.6 0.11 12.8 1.2 2.4 1 1 1 2 2 2 0 Ring finger domain Sel1 PF08238.12 ORF46785 - 8.1e-07 29.5 3.5 0.0066 17.1 0.1 2.7 3 0 0 3 3 3 2 Sel1 repeat NTP_transferase PF00483.23 ORF46274 - 0.011 15.3 0.1 0.013 15.0 0.1 1.0 1 0 0 1 1 1 0 Nucleotidyl transferase Na_H_antiporter PF03553.14 ORF46074 - 0.012 14.9 2.0 0.013 14.8 0.3 1.7 1 1 1 2 2 2 0 Na+/H+ antiporter family DUF4131 PF13567.6 ORF46074 - 0.072 12.7 0.2 0.085 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) FA_desaturase PF00487.24 ORF46074 - 0.13 12.1 1.8 0.14 12.0 1.8 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4191 PF13829.6 ORF46074 - 0.25 10.7 0.7 0.27 10.6 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Phage_TAC_11 PF11836.8 ORF4591 - 0.016 15.3 0.5 0.02 15.0 0.5 1.2 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 zf-RING_2 PF13639.6 ORF4567 - 0.27 11.6 18.8 0.098 13.0 14.7 2.2 2 1 1 3 3 3 0 Ring finger domain zf-BED PF02892.15 ORF4567 - 2.6 8.2 8.0 2.8 8.0 0.1 2.7 3 0 0 3 3 3 0 BED zinc finger DUF674 PF05056.12 ORF45526 - 0.14 11.0 0.4 0.15 10.9 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF674) SHIPPO-rpt PF07004.12 ORF44735 - 0.0021 18.9 10.3 0.16 12.9 0.4 3.3 3 1 0 3 3 3 2 Sperm-tail PG-rich repeat DUF1618 PF07762.14 ORF44294 - 0.04 14.6 0.2 0.044 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1618) WHH PF14414.6 ORF44294 - 0.15 11.9 0.0 0.35 10.7 0.0 1.6 1 0 0 1 1 1 0 A nuclease of the HNH/ENDO VII superfamily with conserved WHH Spc110_C PF18520.1 ORF44255 - 0.084 12.5 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Spindle pole body component 110 C-terminal domain Ras PF00071.22 ORF44116 - 0.00064 19.3 0.0 0.00089 18.9 0.0 1.2 1 0 0 1 1 1 1 Ras family DLIC PF05783.11 ORF44116 - 0.057 12.3 0.0 0.057 12.3 0.0 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) GTP_EFTU PF00009.27 ORF44116 - 0.081 12.5 0.0 0.098 12.2 0.0 1.2 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain TFIID_NTD2 PF04494.15 ORF43909 - 0.017 15.4 0.0 0.026 14.8 0.0 1.4 1 0 0 1 1 1 0 WD40 associated region in TFIID subunit, NTD2 domain Mtf2_C PF14061.6 ORF43141 - 0.13 12.4 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 ZapD PF07072.11 ORF42922 - 0.026 14.3 0.1 0.03 14.1 0.1 1.1 1 0 0 1 1 1 0 Cell division protein CSN7a_helixI PF18392.1 ORF42922 - 0.14 12.0 0.5 0.2 11.6 0.5 1.2 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain DUF3576 PF12100.8 ORF4277 - 0.035 14.2 0.8 0.035 14.2 0.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3576) Beta-prism_lec PF16458.5 ORF4277 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 1 0 1 1 1 0 Beta-prism lectin DUF1533 PF07550.11 ORF42665 - 0.43 10.5 3.0 0.24 11.3 0.6 1.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1533) DAGK_cat PF00781.24 ORF41343 - 2.3e-06 27.3 0.0 3.8e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain CH_2 PF06294.11 ORF41343 - 0.085 13.0 0.0 0.14 12.3 0.0 1.6 2 1 0 2 2 2 0 CH-like domain in sperm protein PepSY_TM PF03929.16 ORF41343 - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 PepSY-associated TM region B2 PF11473.8 ORF41158 - 0.055 13.3 0.4 0.087 12.6 0.4 1.5 1 1 0 1 1 1 0 RNA binding protein B2 CAF1A PF12253.8 ORF40544 - 0.00012 22.2 2.1 0.0002 21.4 2.1 1.5 1 0 0 1 1 1 1 Chromatin assembly factor 1 subunit A DUF1307 PF06998.11 ORF40544 - 0.017 15.1 0.5 0.049 13.7 0.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1307) V-set PF07686.17 ORF40544 - 0.14 12.3 0.1 0.18 12.0 0.1 1.2 1 0 0 1 1 1 0 Immunoglobulin V-set domain zf-C3HC4_3 PF13920.6 ORF39379 - 0.00038 20.3 8.5 0.00051 19.8 8.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF39379 - 0.0006 19.8 2.6 0.0006 19.8 2.6 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF39379 - 0.0014 18.4 8.9 0.0024 17.7 8.9 1.4 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF39379 - 0.0015 18.6 9.7 0.0015 18.6 9.7 1.7 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 ORF39379 - 0.0017 18.7 10.2 0.0025 18.1 10.2 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF39379 - 0.0024 17.7 11.7 0.0038 17.1 11.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF39379 - 0.0024 17.7 6.9 0.0036 17.1 6.9 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF39379 - 0.0086 16.0 11.2 0.082 12.9 12.1 1.9 1 1 1 2 2 2 1 zinc-RING finger domain Zn-ribbon_8 PF09723.10 ORF39379 - 0.0094 16.1 1.6 0.0094 16.1 1.6 2.2 2 0 0 2 2 2 1 Zinc ribbon domain DZR PF12773.7 ORF39379 - 0.029 14.4 2.0 0.029 14.4 2.0 2.1 1 1 1 2 2 2 0 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF39379 - 0.094 12.2 0.1 0.094 12.2 0.1 3.3 2 1 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 ORF39379 - 0.1 12.3 0.2 0.1 12.3 0.2 3.3 3 0 0 3 3 3 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 ORF39379 - 0.2 11.2 6.9 0.53 9.8 0.2 2.5 2 1 0 2 2 2 0 TFIIB zinc-binding zf-rbx1 PF12678.7 ORF39379 - 0.21 11.9 6.8 0.3 11.4 6.8 1.3 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_10 PF16685.5 ORF39379 - 0.39 10.9 7.8 0.66 10.2 7.8 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 Lar_restr_allev PF14354.6 ORF39379 - 2.4 8.6 12.3 2.8 8.4 0.4 2.4 1 1 1 2 2 2 0 Restriction alleviation protein Lar zinc_ribbon_9 PF14369.6 ORF39379 - 2.6 8.4 9.7 0.74 10.1 4.7 2.4 2 1 0 2 2 2 0 zinc-ribbon PhoLip_ATPase_C PF16212.5 ORF39235 - 0.022 14.5 0.1 0.023 14.5 0.1 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal UEV PF05743.13 ORF39197 - 4e-05 23.5 0.2 4.5e-05 23.3 0.2 1.2 1 0 0 1 1 1 1 UEV domain RWD PF05773.22 ORF39197 - 0.0022 18.3 0.2 0.0026 18.0 0.2 1.2 1 0 0 1 1 1 1 RWD domain UQ_con PF00179.26 ORF39197 - 0.063 12.9 0.0 0.063 12.9 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-conjugating enzyme Microtub_bd PF16796.5 ORF38832 - 0.033 14.1 0.1 0.039 13.9 0.1 1.2 1 0 0 1 1 1 0 Microtubule binding PhoLip_ATPase_C PF16212.5 ORF38662 - 0.025 14.3 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF38662 - 0.035 14.0 0.0 0.049 13.5 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Phage_holin_1 PF04531.13 ORF3850 - 0.02 15.4 0.5 0.027 15.0 0.5 1.1 1 0 0 1 1 1 0 Bacteriophage holin DUF2207 PF09972.9 ORF3850 - 0.088 11.6 0.3 0.092 11.5 0.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CSD PF00313.22 ORF38366 - 0.15 12.0 0.0 0.51 10.2 0.0 1.8 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain ART PF01129.18 ORF38238 - 4.4e-05 22.9 0.0 4.6e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 ORF38238 - 0.0037 16.6 0.0 0.0043 16.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosyltransferase exoenzyme Toxin_8 PF07365.12 ORF37853 - 0.0085 16.2 3.8 0.0085 16.2 3.8 2.2 2 0 0 2 2 2 1 Alpha conotoxin precursor FAM199X PF15814.5 ORF3679 - 0.007 15.5 0.7 0.0078 15.3 0.7 1.1 1 0 0 1 1 1 1 Protein family FAM199X Phg_2220_C PF09524.10 ORF3679 - 0.012 15.7 0.3 0.018 15.1 0.3 1.3 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) DUF4606 PF15379.6 ORF3679 - 0.016 15.5 2.6 0.026 14.7 2.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4606) DUF3536 PF12055.8 ORF3679 - 0.019 14.3 0.1 0.021 14.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3536) PRP1_N PF06424.12 ORF3679 - 0.13 12.6 0.2 0.14 12.5 0.2 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal PCAF_N PF06466.11 ORF36550 - 0.0058 16.2 0.2 0.0059 16.2 0.2 1.2 1 0 0 1 1 1 1 PCAF (P300/CBP-associated factor) N-terminal domain Pribosyltran PF00156.27 ORF36179 - 0.00055 19.5 0.0 0.00076 19.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain LRR_6 PF13516.6 ORF36157 - 6.9e-05 22.6 0.1 0.0065 16.4 0.1 3.0 3 0 0 3 3 3 1 Leucine Rich repeat LRR_4 PF12799.7 ORF36157 - 0.045 14.2 0.0 13 6.4 0.0 2.3 1 1 1 2 2 2 0 Leucine Rich repeats (2 copies) Sigma_reg_N PF13800.6 ORF35395 - 0.2 12.0 2.7 0.38 11.1 2.7 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal ComX PF05952.12 ORF35272 - 0.091 12.7 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Bacillus competence pheromone ComX UCR_14kD PF02271.16 ORF34995 - 7.9e-25 86.7 1.2 8.6e-25 86.6 1.2 1.0 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit UIM PF02809.20 ORF34995 - 0.04 13.8 0.5 0.6 10.2 0.0 2.9 3 0 0 3 3 3 0 Ubiquitin interaction motif DAGK_cat PF00781.24 ORF34947 - 2.9e-06 26.9 0.0 4.9e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain PepSY_TM PF03929.16 ORF34947 - 0.14 11.8 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 PepSY-associated TM region OrfB_IS605 PF01385.19 ORF34909 - 0.034 14.4 0.3 0.037 14.2 0.3 1.1 1 0 0 1 1 1 0 Probable transposase EBP PF05241.12 ORF34614 - 0.12 11.8 6.1 0.15 11.5 6.1 1.1 1 0 0 1 1 1 0 Emopamil binding protein SF3a60_bindingd PF12108.8 ORF34585 - 0.079 12.9 0.7 0.079 12.9 0.7 2.6 3 0 0 3 3 3 0 Splicing factor SF3a60 binding domain DUF2756 PF10956.8 ORF33873 - 5.1e-42 142.6 15.7 5.3e-42 142.6 15.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2756) TFIIA PF03153.13 ORF33873 - 5.1 7.0 12.6 5.5 6.9 12.6 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit TrfA PF07042.11 ORF33832 - 0.0098 15.0 0.1 0.011 14.8 0.1 1.0 1 0 0 1 1 1 1 TrfA protein SmpA_OmlA PF04355.13 ORF32626 - 0.096 12.5 0.5 0.17 11.7 0.1 1.6 2 0 0 2 2 2 0 SmpA / OmlA family Cys_rich_KTR PF14205.6 ORF32423 - 0.047 13.5 0.6 0.066 13.0 0.6 1.2 1 0 0 1 1 1 0 Cysteine-rich KTR Cys_rich_KTR PF14205.6 ORF32301 - 0.047 13.5 0.6 0.066 13.0 0.6 1.2 1 0 0 1 1 1 0 Cysteine-rich KTR Ribosomal_S10 PF00338.22 ORF31805 - 1.5e-34 118.2 0.1 1.6e-34 118.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e DUF3576 PF12100.8 ORF31486 - 0.035 14.2 0.8 0.035 14.2 0.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3576) Beta-prism_lec PF16458.5 ORF31486 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 1 0 1 1 1 0 Beta-prism lectin Synaptobrevin PF00957.21 ORF30603 - 1.2e-17 63.4 0.2 1.6e-17 63.1 0.2 1.2 1 0 0 1 1 1 1 Synaptobrevin Sec20 PF03908.13 ORF30603 - 0.073 13.0 0.2 0.17 11.8 0.1 1.6 1 1 0 1 1 1 0 Sec20 DUF2207 PF09972.9 ORF30603 - 0.092 11.5 1.5 0.1 11.4 1.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-HIT PF04438.16 ORF30601 - 0.042 13.7 4.5 0.059 13.3 4.5 1.2 1 0 0 1 1 1 0 HIT zinc finger zf-MYND PF01753.18 ORF30601 - 0.068 13.3 6.3 0.11 12.6 6.3 1.3 1 0 0 1 1 1 0 MYND finger PhnA_Zn_Ribbon PF08274.12 ORF30601 - 0.23 11.4 3.8 1.1 9.2 0.8 2.3 2 0 0 2 2 2 0 PhnA Zinc-Ribbon JAB PF01398.21 ORF30206 - 1.6e-10 41.0 0.5 2.4e-10 40.4 0.5 1.3 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 ORF30206 - 0.11 13.0 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function Viral_DNA_bp PF00747.17 ORF30037 - 0.19 8.8 1.2 0.22 8.6 1.2 1.0 1 0 0 1 1 1 0 ssDNA binding protein Pilin_PilX PF11530.8 ORF29070 - 0.016 15.1 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Minor type IV pilin, PilX EF_TS PF00889.19 ORF28656 - 0.13 11.9 0.1 0.14 11.7 0.1 1.1 1 0 0 1 1 1 0 Elongation factor TS 3H PF02829.14 ORF27204 - 0.083 13.2 0.0 16 5.9 0.0 2.1 1 1 1 2 2 2 0 3H domain PB1-F2 PF11986.8 ORF26709 - 0.0064 16.7 2.0 0.0082 16.3 1.0 1.8 1 1 1 2 2 2 1 Influenza A Proapoptotic protein TPH PF13868.6 ORF26127 - 0.0055 15.3 38.3 0.0059 15.2 38.3 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain UvrD-helicase PF00580.21 ORF26127 - 3.1 7.2 12.9 3.6 7.0 12.9 1.0 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain Tachystatin_B PF11478.8 ORF25944 - 0.096 12.6 7.3 0.23 11.4 1.7 2.4 2 0 0 2 2 2 0 Antimicrobial chitin binding protein tachystatin B HydF_tetramer PF18133.1 ORF24952 - 0.06 13.1 0.0 0.085 12.6 0.0 1.2 1 0 0 1 1 1 0 Hydrogen maturase F tetramerization domain Phage_TAC_11 PF11836.8 ORF24902 - 0.016 15.3 0.5 0.02 15.0 0.5 1.2 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 Sugar_tr PF00083.24 ORF24434 - 9e-09 34.7 3.3 1e-08 34.5 3.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter PMT_4TMC PF16192.5 ORF24136 - 0.024 14.2 6.0 0.032 13.8 6.0 1.3 1 1 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase DUF2628 PF10947.8 ORF24136 - 6.8 7.1 7.4 3.3 8.1 5.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2628) DUF1980 PF09323.10 ORF24136 - 9.7 6.1 8.4 2 8.3 4.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) PDEase_I PF00233.19 ORF2383 - 3e-05 23.9 0.0 3.6e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase DNA_pol_B PF00136.21 ORF23746 - 0.03 13.0 0.3 0.043 12.5 0.2 1.4 1 1 0 1 1 1 0 DNA polymerase family B DUF2148 PF09918.9 ORF22952 - 0.066 13.3 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein containing a ferredoxin domain (DUF2148) GcpE PF04551.14 ORF22843 - 0.12 11.4 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 GcpE protein UPF0051 PF01458.17 ORF227 - 8.9e-24 84.4 0.0 1e-23 84.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) DUF1974 PF09317.11 ORF22584 - 0.0048 16.5 3.1 0.0055 16.3 3.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1974) TMEM191C PF15194.6 ORF22584 - 0.15 12.2 4.7 2.4 8.4 0.4 2.1 1 1 1 2 2 2 0 TMEM191C family THOC7 PF05615.13 ORF22584 - 0.16 12.3 11.1 0.22 11.8 11.1 1.2 1 0 0 1 1 1 0 Tho complex subunit 7 DUF501 PF04417.12 ORF22584 - 0.39 10.5 5.8 0.47 10.3 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF501) TMPIT PF07851.13 ORF22584 - 2.5 7.3 4.2 2.7 7.1 4.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4407 PF14362.6 ORF22584 - 7.1 5.9 11.7 7.6 5.8 11.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PRK PF00485.18 ORF22405 - 0.13 12.0 0.1 0.15 11.8 0.1 1.1 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Dexa_ind PF15198.6 ORF22301 - 0.05 13.7 3.8 0.079 13.1 3.8 1.3 1 0 0 1 1 1 0 Dexamethasone-induced Presenilin PF01080.17 ORF22301 - 8.2 5.1 10.2 7.7 5.2 10.2 1.1 1 0 0 1 1 1 0 Presenilin PDZ PF00595.24 ORF22254 - 0.0023 18.2 0.1 0.005 17.2 0.1 1.6 1 1 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF22254 - 0.026 14.4 0.1 0.046 13.6 0.1 1.5 1 1 0 1 1 1 0 PDZ domain PDZ_2 PF13180.6 ORF22254 - 0.044 14.1 0.0 0.055 13.8 0.0 1.4 1 0 0 1 1 1 0 PDZ domain PhoLip_ATPase_C PF16212.5 ORF22145 - 0.021 14.6 0.1 0.023 14.4 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF22145 - 0.04 13.8 0.1 0.056 13.3 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain DUF1819 PF08849.11 ORF21953 - 0.25 11.1 2.1 0.69 9.7 0.6 1.9 1 1 1 2 2 2 0 Putative inner membrane protein (DUF1819) HOOK PF05622.12 ORF21910 - 0.0063 14.7 1.6 0.007 14.6 1.6 1.0 1 0 0 1 1 1 1 HOOK protein TSC22 PF01166.18 ORF21910 - 0.012 15.9 0.8 0.057 13.7 0.1 2.1 2 1 0 2 2 2 0 TSC-22/dip/bun family DUF724 PF05266.14 ORF21910 - 0.03 14.1 1.3 0.35 10.7 0.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF724) GIT_CC PF16559.5 ORF21910 - 0.08 12.8 0.3 0.08 12.8 0.3 1.6 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Herpes_BLRF2 PF05812.12 ORF21910 - 0.083 13.0 2.1 0.15 12.2 1.0 1.8 2 0 0 2 2 2 0 Herpesvirus BLRF2 protein DivIC PF04977.15 ORF21910 - 0.12 12.2 0.7 0.12 12.2 0.7 2.0 2 0 0 2 2 2 0 Septum formation initiator ALMT PF11744.8 ORF21660 - 2.4 6.9 6.9 2.7 6.7 6.9 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Sec62 PF03839.16 ORF21660 - 4.2 6.8 12.0 5 6.6 12.0 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 MDFI PF15316.6 ORF21660 - 6 6.9 8.9 6.9 6.7 8.9 1.0 1 0 0 1 1 1 0 MyoD family inhibitor Cation_ATPase_C PF00689.21 ORF21580 - 3.8 7.2 16.8 4.4 7.0 16.8 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF1075 PF06388.11 ORF21361 - 1.1 9.4 5.3 1.3 9.0 1.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1075) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks230.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks230.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks230.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks230.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:00:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LapA_dom PF06305.11 ORF2068 - 0.076 12.8 0.1 0.17 11.7 0.1 1.6 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Ribosomal_L21p PF00829.21 ORF20595 - 2.6e-37 127.1 3.1 2.8e-37 127.0 3.1 1.0 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein CSD PF00313.22 ORF20399 - 0.15 12.0 0.0 0.51 10.2 0.0 1.8 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain TPR_2 PF07719.17 ORF19582 - 3e-05 23.8 0.1 5.3e-05 23.0 0.1 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF19582 - 0.00014 21.8 2.1 0.00054 20.0 0.1 2.4 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF19582 - 0.00037 20.2 0.2 0.00074 19.2 0.2 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF19582 - 0.0016 18.9 0.2 0.0037 17.8 0.2 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF19582 - 0.002 18.0 0.7 0.014 15.3 0.7 2.1 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF19582 - 0.044 14.6 0.0 0.062 14.2 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF19582 - 0.053 13.2 0.7 0.13 11.9 0.6 1.7 1 1 0 1 1 1 0 TPR repeat Smac_DIABLO PF09057.10 ORF19582 - 0.51 9.6 6.2 0.68 9.2 6.2 1.2 1 0 0 1 1 1 0 Second Mitochondria-derived Activator of Caspases Ly49 PF08391.10 ORF19582 - 7.7 6.9 11.5 11 6.5 11.5 1.3 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region HD_3 PF13023.6 ORF18495 - 0.013 15.4 0.5 0.018 15.0 0.4 1.4 1 1 0 1 1 1 0 HD domain cwf21 PF08312.12 ORF18495 - 0.91 9.7 10.1 0.13 12.4 4.6 2.4 2 1 0 2 2 2 0 cwf21 domain FumaraseC_C PF10415.9 ORF18332 - 0.004 17.5 1.3 1.2 9.7 0.1 2.3 2 1 0 2 2 2 2 Fumarase C C-terminus PhageMin_Tail PF10145.9 ORF18332 - 0.045 13.6 5.7 0.59 10.0 2.6 2.0 1 1 1 2 2 2 0 Phage-related minor tail protein YtxH PF12732.7 ORF18332 - 0.85 10.2 4.6 33 5.1 4.6 2.3 1 1 0 1 1 1 0 YtxH-like protein SinI PF08671.10 ORF18332 - 1.2 9.0 7.3 22 4.9 0.2 3.2 3 0 0 3 3 3 0 Anti-repressor SinI HOOK PF05622.12 ORF182 - 0.0063 14.7 1.6 0.007 14.6 1.6 1.0 1 0 0 1 1 1 1 HOOK protein TSC22 PF01166.18 ORF182 - 0.012 15.9 0.8 0.057 13.7 0.1 2.1 2 1 0 2 2 2 0 TSC-22/dip/bun family DUF724 PF05266.14 ORF182 - 0.03 14.1 1.3 0.35 10.7 0.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF724) GIT_CC PF16559.5 ORF182 - 0.08 12.8 0.3 0.08 12.8 0.3 1.6 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Herpes_BLRF2 PF05812.12 ORF182 - 0.083 13.0 2.1 0.15 12.2 1.0 1.8 2 0 0 2 2 2 0 Herpesvirus BLRF2 protein DivIC PF04977.15 ORF182 - 0.12 12.2 0.7 0.12 12.2 0.7 2.0 2 0 0 2 2 2 0 Septum formation initiator Ribosomal_S13 PF00416.22 ORF1782 - 2.6e-34 118.4 0.1 2.8e-34 118.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 Sdh5 PF03937.16 ORF1782 - 0.13 12.2 0.2 0.27 11.2 0.0 1.6 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase B_lectin PF01453.24 ORF17735 - 0.0022 18.5 0.0 0.06 13.9 0.0 2.0 1 1 1 2 2 2 1 D-mannose binding lectin MTD PF01993.18 ORF17652 - 0.01 15.2 0.1 0.011 15.1 0.1 1.0 1 0 0 1 1 1 0 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase Bro-N PF02498.17 ORF17263 - 0.049 14.3 1.4 0.07 13.8 1.4 1.2 1 0 0 1 1 1 0 BRO family, N-terminal domain MDFI PF15316.6 ORF17263 - 1.3 9.1 4.2 1.4 9.0 4.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor zf-ribbon_3 PF13248.6 ORF17082 - 1.6 8.2 5.7 4.9 6.7 0.9 3.1 2 1 1 3 3 3 0 zinc-ribbon domain AIPR PF10592.9 ORF16644 - 0.41 10.2 5.7 0.44 10.1 5.7 1.0 1 0 0 1 1 1 0 AIPR protein PMT_4TMC PF16192.5 ORF16437 - 0.024 14.2 6.0 0.032 13.8 6.0 1.3 1 1 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase DUF2628 PF10947.8 ORF16437 - 6.8 7.1 7.4 3.3 8.1 5.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2628) DUF1980 PF09323.10 ORF16437 - 9.7 6.1 8.4 2 8.3 4.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) DivIC PF04977.15 ORF16141 - 3e-30 103.8 0.0 3.5e-30 103.6 0.0 1.1 1 0 0 1 1 1 1 Septum formation initiator LPD5 PF18799.1 ORF15931 - 0.014 15.8 0.5 0.016 15.6 0.5 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 5 Arc PF03869.14 ORF15931 - 0.064 13.1 0.1 1.7 8.5 0.0 2.2 2 0 0 2 2 2 0 Arc-like DNA binding domain DUF2207 PF09972.9 ORF14721 - 0.00042 19.2 0.0 0.00047 19.0 0.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF3671 PF12420.8 ORF14721 - 0.00046 20.2 0.0 0.00054 20.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function TMEM154 PF15102.6 ORF14721 - 0.0029 17.5 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 TMEM154 protein family DUF3899 PF13038.6 ORF14721 - 0.0037 17.7 0.0 0.006 17.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3899) DUF2140 PF09911.9 ORF14721 - 0.0054 16.3 0.1 0.0077 15.8 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2140) DUF5385 PF17359.2 ORF14721 - 0.0087 15.6 0.1 0.013 15.1 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5385) BatD PF13584.6 ORF14721 - 0.0092 14.8 0.0 0.0099 14.7 0.0 1.0 1 0 0 1 1 1 1 Oxygen tolerance ATG27 PF09451.10 ORF14721 - 0.011 15.6 0.1 0.014 15.2 0.1 1.2 1 0 0 1 1 1 0 Autophagy-related protein 27 DUF5305 PF17231.2 ORF14721 - 0.016 14.7 0.0 0.018 14.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4577 PF15145.6 ORF14721 - 0.027 14.5 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) SIT PF15330.6 ORF14721 - 0.029 14.8 0.0 0.045 14.2 0.0 1.3 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT Orf78 PF06024.12 ORF14721 - 0.051 13.9 0.0 0.062 13.6 0.0 1.2 1 0 0 1 1 1 0 Orf78 (ac78) DUF2615 PF11027.8 ORF14721 - 0.09 12.9 0.0 0.12 12.6 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) Tetraspanin PF00335.20 ORF14721 - 0.098 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF4834 PF16118.5 ORF14721 - 0.1 13.6 1.0 0.13 13.2 0.2 1.6 2 0 0 2 2 1 0 Domain of unknown function (DUF4834) DUF4330 PF14221.6 ORF14721 - 0.14 12.4 0.1 0.2 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) DUF2973 PF11189.8 ORF14721 - 0.15 12.2 0.1 0.22 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) TMCO5 PF14992.6 ORF14721 - 0.16 11.5 0.1 0.19 11.3 0.1 1.1 1 0 0 1 1 1 0 TMCO5 family Baculo_F PF12259.8 ORF14721 - 0.2 10.2 0.0 0.2 10.1 0.0 1.0 1 0 0 1 1 1 0 Baculovirus F protein SARAF PF06682.12 ORF14721 - 0.21 11.2 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis FeoB_associated PF12669.7 ORF14721 - 0.21 12.0 0.6 0.31 11.5 0.6 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein OATP PF03137.20 ORF14721 - 0.22 9.8 0.0 0.21 9.9 0.0 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Wzy_C PF04932.15 ORF14721 - 0.22 11.2 2.8 0.27 10.8 2.8 1.1 1 0 0 1 1 1 0 O-Antigen ligase PsbW PF07123.12 ORF14721 - 0.22 11.5 0.1 0.32 11.0 0.1 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) Shisa PF13908.6 ORF14721 - 0.23 11.7 0.0 0.26 11.5 0.0 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator LpqV PF17301.2 ORF14695 - 0.11 12.7 0.1 0.2 11.9 0.1 1.4 1 0 0 1 1 1 0 Putative lipoprotein LpqV DUF2568 PF10823.8 ORF14284 - 0.073 13.4 0.2 0.13 12.6 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2568) DUF3613 PF12266.8 ORF13973 - 0.039 13.7 1.0 0.039 13.7 1.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3613) DSPc PF00782.20 ORF13853 - 4.6e-17 62.1 0.0 5.2e-17 61.9 0.0 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF13853 - 0.045 13.3 0.1 0.07 12.7 0.1 1.5 1 1 0 1 1 1 0 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF13853 - 0.059 13.5 0.0 0.073 13.2 0.0 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate Flavodoxin_3 PF12641.7 ORF13853 - 0.099 12.3 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Flavodoxin domain MttA_Hcf106 PF02416.16 ORF13828 - 2.2e-15 55.7 0.6 3.6e-15 55.0 0.6 1.5 1 1 0 1 1 1 1 mttA/Hcf106 family DUF1980 PF09323.10 ORF13828 - 0.0013 18.7 0.0 0.0015 18.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1980) DUF4834 PF16118.5 ORF13828 - 0.008 17.1 0.1 0.011 16.7 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) WD40 PF00400.32 ORF13663 - 1.1e-05 26.1 1.8 0.03 15.2 0.1 3.0 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF13663 - 0.0025 18.1 0.0 2.1 8.7 0.0 2.6 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain SARS_X4 PF08779.10 ORF13663 - 0.0093 16.1 0.0 0.012 15.8 0.0 1.2 1 0 0 1 1 1 1 SARS coronavirus X4 like DUF2417 PF10329.9 ORF1334 - 1.7 8.0 10.5 1.6 8.1 9.9 1.2 1 1 0 1 1 1 0 Region of unknown function (DUF2417) Pardaxin PF07425.11 ORF1334 - 7.9 6.2 7.2 12 5.6 0.2 3.2 3 0 0 3 3 3 0 Pardaxin DUF1075 PF06388.11 ORF12828 - 1.1 9.4 5.3 1.3 9.0 1.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1075) Acetyltransf_4 PF13420.7 ORF12563 - 0.09 12.9 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Form-deh_trans PF09163.11 ORF11397 - 3.9e-21 74.5 0.1 7.1e-21 73.7 0.1 1.4 1 0 0 1 1 1 1 Formate dehydrogenase N, transmembrane T2SSM PF04612.12 ORF111859 - 0.1 12.7 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M Pigment_DH PF06324.11 ORF111531 - 0.11 12.7 0.1 0.19 11.9 0.1 1.4 1 0 0 1 1 1 0 Pigment-dispersing hormone (PDH) DUF1679 PF07914.11 ORF111488 - 0.0011 17.9 0.3 0.0012 17.8 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) DUF771 PF05595.11 ORF111488 - 0.013 15.5 0.7 2.7 8.0 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF771) ABA_GPCR PF12430.8 ORF111095 - 0.097 12.4 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Abscisic acid G-protein coupled receptor NSP2_assoc PF14758.6 ORF110794 - 0.062 13.6 0.2 0.08 13.3 0.2 1.1 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein TrfA PF07042.11 ORF110493 - 0.0098 15.0 0.1 0.011 14.8 0.1 1.0 1 0 0 1 1 1 1 TrfA protein DNA_pol_B PF00136.21 ORF110299 - 0.03 13.0 0.3 0.043 12.5 0.2 1.4 1 1 0 1 1 1 0 DNA polymerase family B Vta1 PF04652.16 ORF10934 - 5.1e-06 26.5 1.8 6.1e-06 26.3 1.8 1.1 1 0 0 1 1 1 1 Vta1 like KxDL PF10241.9 ORF10934 - 0.036 14.3 2.8 0.26 11.6 1.5 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein FliD_N PF02465.18 ORF10934 - 0.16 12.7 1.7 0.16 12.7 0.5 1.6 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus PsbL PF02419.17 ORF10921 - 2.1e-18 66.0 0.9 2.1e-18 66.0 0.9 1.7 2 0 0 2 2 2 1 PsbL protein Glyco_hydro_20 PF00728.22 ORF10863 - 0.00074 19.0 0.0 0.00087 18.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain DUF1836 PF08876.11 ORF108382 - 0.0067 16.4 2.6 0.017 15.1 2.4 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF1836) p450 PF00067.22 ORF107905 - 3.3e-18 65.7 0.3 3.5e-18 65.6 0.3 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF4211 PF13926.6 ORF107629 - 0.0089 16.1 1.2 0.01 15.9 1.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4211) DUF885 PF05960.11 ORF107629 - 0.016 14.8 0.5 0.018 14.7 0.5 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) HD_assoc PF13286.6 ORF107629 - 0.047 14.2 2.0 0.066 13.8 2.0 1.2 1 0 0 1 1 1 0 Phosphohydrolase-associated domain DUF5105 PF17118.5 ORF107629 - 0.12 12.2 6.2 0.053 13.3 2.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5105) 60KD_IMP PF02096.20 ORF107629 - 0.5 10.3 4.7 0.12 12.3 1.6 1.5 2 0 0 2 2 2 0 60Kd inner membrane protein DAGK_cat PF00781.24 ORF106586 - 2.3e-06 27.3 0.0 3.8e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain CH_2 PF06294.11 ORF106586 - 0.085 13.0 0.0 0.14 12.3 0.0 1.6 2 1 0 2 2 2 0 CH-like domain in sperm protein PepSY_TM PF03929.16 ORF106586 - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 PepSY-associated TM region Arf PF00025.21 ORF105519 - 1.3e-43 148.5 0.4 1.4e-43 148.4 0.4 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF105519 - 1e-12 48.4 0.0 1.3e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 ORF105519 - 1.2e-10 41.2 1.5 6e-05 22.4 0.1 2.0 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 ORF105519 - 7.9e-09 35.3 0.0 9.8e-09 35.0 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 ORF105519 - 6.9e-07 28.9 0.0 8.5e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF105519 - 7.2e-07 28.8 0.0 9.1e-07 28.5 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 ORF105519 - 1.4e-06 28.4 0.0 1.8e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase TniB PF05621.11 ORF105519 - 0.0044 16.5 0.0 0.0055 16.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein ATPase_2 PF01637.18 ORF105519 - 0.0044 17.0 0.1 0.0047 16.9 0.1 1.1 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 ORF105519 - 0.016 15.2 0.0 0.018 15.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain KH_2 PF07650.17 ORF105519 - 0.07 13.0 0.3 0.22 11.4 0.0 1.9 2 0 0 2 2 2 0 KH domain MobB PF03205.14 ORF105519 - 0.075 12.9 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Kinesin PF00225.23 ORF103978 - 2.6e-10 39.7 0.0 3e-10 39.5 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain RSN1_7TM PF02714.15 ORF103832 - 9.7e-10 38.2 5.7 1.1e-09 38.1 5.7 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate Anoctamin PF04547.12 ORF103832 - 0.0033 16.3 2.2 0.0034 16.3 2.2 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel DUF5453 PF17534.2 ORF103832 - 0.087 12.8 2.9 0.095 12.7 2.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5453) CK2S PF15011.6 ORF103566 - 0.0085 16.0 0.9 0.012 15.6 0.9 1.3 1 0 0 1 1 1 1 Casein Kinase 2 substrate AAA_23 PF13476.6 ORF103566 - 0.13 12.8 10.4 0.14 12.6 10.4 1.1 1 0 0 1 1 1 0 AAA domain PCRF PF03462.18 ORF103566 - 0.17 11.7 3.0 0.2 11.5 3.0 1.1 1 0 0 1 1 1 0 PCRF domain Acetyltransf_4 PF13420.7 ORF102689 - 0.09 12.9 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF4533 PF15047.6 ORF102216 - 0.041 13.4 0.1 0.051 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4533) DUF3440 PF11922.8 ORF102216 - 0.082 12.6 0.1 0.085 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) Pox_polyA_pol PF03296.13 ORF101688 - 0.095 12.6 0.0 0.14 12.1 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Cornichon PF03311.14 ORF10146 - 0.01 16.2 5.2 0.013 15.8 5.2 1.2 1 0 0 1 1 1 0 Cornichon protein DUF3169 PF11368.8 ORF10146 - 0.021 14.4 1.1 0.023 14.2 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) VWC PF00093.18 ORF10141 - 0.14 12.5 6.0 0.18 12.1 6.0 1.2 1 0 0 1 1 1 0 von Willebrand factor type C domain RRM_7 PF16367.5 ORF10094 - 0.018 15.1 0.1 0.12 12.5 0.0 2.0 1 1 1 2 2 2 0 RNA recognition motif Deltameth_res PF16020.5 ORF10094 - 0.078 12.9 0.4 0.078 12.9 0.4 1.6 2 0 0 2 2 2 0 Deltamethrin resistance Methyltransf_25 PF13649.6 ORF100887 - 3.9e-07 30.7 0.0 6.1e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF100887 - 4.5e-06 27.2 0.0 7.6e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF100887 - 4e-05 23.4 0.0 4.9e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 ORF100887 - 0.00015 21.5 0.1 0.00016 21.4 0.1 1.0 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_23 PF13489.6 ORF100887 - 0.00025 20.9 0.0 0.00028 20.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF100887 - 0.0012 19.5 0.0 0.0018 19.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF100887 - 0.0034 17.0 0.0 0.0038 16.9 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) TRM13 PF05206.14 ORF100887 - 0.012 15.2 0.0 0.014 15.0 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase TRM13 TehB PF03848.14 ORF100887 - 0.029 13.8 0.0 0.031 13.7 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB DREV PF05219.12 ORF100887 - 0.051 12.7 0.0 0.055 12.5 0.0 1.1 1 0 0 1 1 1 0 DREV methyltransferase DUF1132 PF06575.12 ORF100533 - 0.016 15.6 0.3 2.3 8.6 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1132) TNF PF00229.18 ORF100498 - 0.031 14.2 0.3 0.037 14.0 0.3 1.1 1 0 0 1 1 1 0 TNF(Tumour Necrosis Factor) family ThiF PF00899.21 NODE_56260_length_304_cov_1.148699_g48323_i0reverse_frame_1 - 0.062 12.6 0.0 0.1 12.0 0.0 1.3 1 1 0 1 1 1 0 ThiF family PqqD PF05402.12 NODE_56260_length_304_cov_1.148699_g48323_i0reverse_frame_1 - 0.15 12.4 0.0 20 5.6 0.0 2.2 2 0 0 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) DIM1 PF02966.16 NODE_56252_length_304_cov_1.468401_g48315_i0forward_frame_1 - 0.075 12.8 0.3 0.086 12.6 0.3 1.1 1 0 0 1 1 1 0 Mitosis protein DIM1 DNA_ligase_A_M PF01068.21 NODE_56248_length_304_cov_1.490706_g48311_i0reverse_frame_1 - 0.0022 17.7 0.2 0.0029 17.3 0.2 1.2 1 0 0 1 1 1 1 ATP dependent DNA ligase domain FeoB_Cyto PF17910.1 NODE_56248_length_304_cov_1.490706_g48311_i0reverse_frame_1 - 0.086 13.4 0.2 0.15 12.6 0.2 1.3 1 0 0 1 1 1 0 FeoB cytosolic helical domain DUF2884 PF11101.8 NODE_56248_length_304_cov_1.490706_g48311_i0reverse_frame_1 - 0.13 11.7 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) BLUF PF04940.12 NODE_56246_length_304_cov_1.568773_g48309_i0forward_frame_1 - 0.066 13.3 0.1 0.099 12.8 0.1 1.3 1 0 0 1 1 1 0 Sensors of blue-light using FAD TAN PF11640.8 NODE_56238_length_304_cov_1.721190_g48301_i0reverse_frame_1 - 0.031 14.4 0.2 0.035 14.2 0.2 1.1 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair zf-TAZ PF02135.16 NODE_56238_length_304_cov_1.721190_g48301_i0forward_frame_1 - 0.26 11.8 6.2 0.38 11.3 6.2 1.3 1 0 0 1 1 1 0 TAZ zinc finger DUF2574 PF10836.8 NODE_56228_length_304_cov_2.044610_g48291_i0forward_frame_1 - 0.048 13.5 0.3 0.08 12.8 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) NIF PF03031.18 NODE_56219_length_304_cov_2.323420_g48282_i0forward_frame_1 - 5.8e-07 29.4 0.0 9e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Lustrin_cystein PF14625.6 NODE_56216_length_304_cov_2.371747_g48279_i0forward_frame_1 - 0.061 13.7 6.3 0.061 13.7 6.3 2.2 3 1 0 3 3 3 0 Lustrin, cysteine-rich repeated domain CDC37_C PF08564.10 NODE_56215_length_304_cov_2.386617_g48278_i0reverse_frame_1 - 0.00077 19.5 0.2 0.0026 17.8 0.1 1.8 2 0 0 2 2 2 1 Cdc37 C terminal domain Dpy-30 PF05186.13 NODE_56214_length_304_cov_2.397770_g48277_i0forward_frame_1 - 1.6e-06 27.7 0.1 2.1e-06 27.3 0.1 1.2 1 0 0 1 1 1 1 Dpy-30 motif Pox_VP8_L4R PF04498.12 NODE_56214_length_304_cov_2.397770_g48277_i0forward_frame_1 - 0.041 13.5 0.2 0.045 13.4 0.2 1.1 1 0 0 1 1 1 0 Poxvirus nucleic acid binding protein VP8/L4R Ac76 PF05814.11 NODE_56214_length_304_cov_2.397770_g48277_i0forward_frame_1 - 7.3 6.7 6.1 5.3 7.1 0.7 2.1 1 1 1 2 2 2 0 Orf76 (Ac76) Ribosomal_L27_C PF18471.1 NODE_56213_length_304_cov_2.416357_g48276_i0reverse_frame_1 - 0.0047 16.4 0.0 0.0058 16.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal L27 protein C-terminal domain OmpW PF03922.14 NODE_56210_length_304_cov_2.646840_g48273_i0reverse_frame_1 - 3.1e-16 59.8 0.0 3.9e-16 59.5 0.0 1.1 1 0 0 1 1 1 1 OmpW family TraA PF05513.11 NODE_56210_length_304_cov_2.646840_g48273_i0reverse_frame_1 - 0.062 13.6 0.1 0.072 13.4 0.1 1.2 1 0 0 1 1 1 0 TraA DUF2802 PF10975.8 NODE_56206_length_304_cov_2.765799_g48269_i0reverse_frame_1 - 0.044 13.9 0.0 0.065 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2802) Ac76 PF05814.11 NODE_56203_length_304_cov_2.996283_g48266_i0reverse_frame_1 - 0.011 15.7 0.2 0.016 15.2 0.2 1.4 1 1 0 1 1 1 0 Orf76 (Ac76) Consortin_C PF15281.6 NODE_56203_length_304_cov_2.996283_g48266_i0reverse_frame_1 - 0.053 13.5 0.9 0.08 12.9 0.6 1.4 1 1 0 1 1 1 0 Consortin C-terminus MdoG PF04349.12 NODE_56201_length_304_cov_3.230483_g48264_i0forward_frame_1 - 1.9e-44 152.4 0.0 2e-44 152.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic glucan biosynthesis protein, MdoG TNV_CP PF03898.13 NODE_56201_length_304_cov_3.230483_g48264_i0forward_frame_1 - 0.071 12.4 0.0 0.074 12.3 0.0 1.1 1 0 0 1 1 1 0 Satellite tobacco necrosis virus coat protein MFS_1 PF07690.16 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 1.6e-09 37.2 0.4 1.9e-09 36.9 0.4 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 0.00065 18.7 0.2 0.00078 18.4 0.2 1.1 1 0 0 1 1 1 1 MFS_1 like family FPN1 PF06963.12 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 0.00084 18.0 0.7 0.00086 18.0 0.7 1.1 1 0 0 1 1 1 1 Ferroportin1 (FPN1) Sugar_tr PF00083.24 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 0.054 12.4 4.3 0.12 11.2 4.3 1.6 1 1 0 1 1 1 0 Sugar (and other) transporter DUF21 PF01595.20 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 0.073 12.8 0.0 0.096 12.4 0.0 1.3 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain DUF952 PF06108.12 NODE_56192_length_304_cov_4.498141_g48255_i0reverse_frame_1 - 0.089 12.8 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF952) Chloroplast_duf PF14476.6 NODE_56190_length_304_cov_5.364312_g48253_i0forward_frame_1 - 0.039 12.9 0.0 0.045 12.7 0.0 1.0 1 0 0 1 1 1 0 Petal formation-expressed PDR_assoc PF08370.11 NODE_56188_length_304_cov_10.297398_g48251_i0reverse_frame_1 - 0.37 10.6 4.1 0.69 9.7 4.1 1.4 1 0 0 1 1 1 0 Plant PDR ABC transporter associated Lamprin PF06403.11 NODE_56186_length_304_cov_34.104089_g48249_i0forward_frame_1 - 1.4 8.9 8.3 9.6 6.2 3.7 2.1 2 0 0 2 2 2 0 Lamprin Ribosomal_L41 PF05162.13 NODE_56183_length_304_cov_43.884758_g48246_i0reverse_frame_1 - 3.3e-06 27.0 25.3 3.3e-06 27.0 25.3 2.8 4 0 0 4 4 4 1 Ribosomal protein L41 CagE_TrbE_VirB PF03135.14 NODE_56183_length_304_cov_43.884758_g48246_i0reverse_frame_1 - 0.19 11.8 0.4 0.3 11.2 0.4 1.3 1 0 0 1 1 1 0 CagE, TrbE, VirB family, component of type IV transporter system MSA-2c PF12238.8 NODE_56183_length_304_cov_43.884758_g48246_i0forward_frame_1 - 0.19 11.7 1.0 0.25 11.3 1.0 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF3786 PF12654.7 NODE_56181_length_304_cov_49.728625_g48244_i0forward_frame_1 - 0.09 12.4 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3786) Defensin_1 PF00323.19 NODE_56170_length_304_cov_74.197026_g48233_i0reverse_frame_1 - 0.25 11.9 2.1 3.1 8.4 0.6 2.3 1 1 1 2 2 2 0 Mammalian defensin PMG PF05287.12 NODE_56166_length_304_cov_80.776952_g48229_i0forward_frame_1 - 0.085 12.9 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 PMG protein DUF3724 PF12521.8 NODE_56165_length_304_cov_82.899628_g48228_i0reverse_frame_1 - 0.093 12.7 2.4 0.093 12.7 2.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3724) Uteroglobin PF01099.17 NODE_56158_length_304_cov_95.687732_g48221_i0forward_frame_1 - 0.13 12.7 1.0 0.16 12.3 1.0 1.3 1 0 0 1 1 1 0 Uteroglobin family RCC1_2 PF13540.6 NODE_56157_length_304_cov_98.557621_g48220_i0forward_frame_1 - 0.00023 20.9 1.7 0.39 10.6 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Citrate_synt PF00285.21 NODE_56157_length_304_cov_98.557621_g48220_i0forward_frame_1 - 0.019 14.0 0.1 0.023 13.8 0.1 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain DUF155 PF02582.14 NODE_56157_length_304_cov_98.557621_g48220_i0forward_frame_1 - 0.19 11.8 0.2 20 5.3 0.1 2.2 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PheRS_DBD2 PF18554.1 NODE_56157_length_304_cov_98.557621_g48220_i0forward_frame_1 - 0.34 11.0 7.7 2.6 8.1 0.6 2.4 2 0 0 2 2 2 0 PheRS DNA binding domain 2 FtsH_ext PF06480.15 NODE_56155_length_304_cov_102.308550_g48218_i0forward_frame_1 - 1 9.7 6.0 1.5 9.2 6.0 1.2 1 0 0 1 1 1 0 FtsH Extracellular DUF4131 PF13567.6 NODE_56155_length_304_cov_102.308550_g48218_i0forward_frame_1 - 1.5 8.4 7.4 2.1 8.0 7.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2070 PF09843.9 NODE_56155_length_304_cov_102.308550_g48218_i0forward_frame_1 - 4.4 5.5 10.8 4.7 5.4 10.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Pex24p PF06398.11 NODE_56155_length_304_cov_102.308550_g48218_i0forward_frame_1 - 4.6 6.1 9.3 5 6.0 9.3 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Nucleoporin2 PF04096.14 NODE_56154_length_304_cov_114.899628_g48217_i0forward_frame_1 - 0.37 10.9 4.1 19 5.3 0.0 2.8 1 1 2 3 3 3 0 Nucleoporin autopeptidase Spore_III_AB PF09548.10 NODE_56154_length_304_cov_114.899628_g48217_i0forward_frame_1 - 0.38 10.8 4.7 0.46 10.6 4.7 1.0 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) DUF760 PF05542.11 NODE_56150_length_304_cov_130.494424_g48213_i0reverse_frame_1 - 0.021 15.2 0.5 0.029 14.7 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF760) EFP_N PF08207.12 NODE_56138_length_304_cov_349.553903_g48201_i0reverse_frame_1 - 0.065 13.3 0.2 0.12 12.5 0.2 1.3 1 0 0 1 1 1 0 Elongation factor P (EF-P) KOW-like domain O-ag_pol_Wzy PF14296.6 NODE_56138_length_304_cov_349.553903_g48201_i0forward_frame_1 - 0.0066 15.1 0.6 0.0073 15.0 0.6 1.1 1 0 0 1 1 1 1 O-antigen polysaccharide polymerase Wzy DUF1449 PF07290.11 NODE_56133_length_305_cov_0.951852_g48197_i0forward_frame_1 - 0.017 14.8 0.2 0.021 14.5 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1449) DUF4194 PF13835.6 NODE_56127_length_305_cov_1.262963_g48191_i0reverse_frame_1 - 0.018 14.8 0.1 0.02 14.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4194) tRNA_anti-codon PF01336.25 NODE_56117_length_305_cov_1.581481_g48181_i0reverse_frame_1 - 8.5e-09 35.3 0.2 1e-08 35.0 0.2 1.1 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF223 PF02721.14 NODE_56117_length_305_cov_1.581481_g48181_i0reverse_frame_1 - 9.5e-05 22.6 0.6 9.5e-05 22.6 0.6 1.4 2 0 0 2 2 2 1 Domain of unknown function DUF223 Phospholamban PF04272.14 NODE_56097_length_305_cov_2.344444_g48161_i0reverse_frame_1 - 2.3 7.8 15.8 3.9 7.0 0.3 2.8 2 1 1 3 3 3 0 Phospholamban PRA-CH PF01502.18 NODE_56090_length_305_cov_2.825926_g48154_i0reverse_frame_1 - 1.3e-31 108.3 0.0 1.5e-31 108.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase Ank_2 PF12796.7 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 2e-19 70.0 0.4 8.5e-19 67.9 0.4 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 1.8e-13 49.4 0.1 0.0016 18.7 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 3.8e-13 49.4 0.9 0.011 16.1 0.0 3.0 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 2.6e-12 46.6 0.4 0.018 15.4 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 1.6e-11 44.5 0.3 5.1e-07 30.1 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) SRP-alpha_N PF04086.13 NODE_56069_length_305_cov_61.177778_g48133_i0forward_frame_1 - 3.8 7.3 12.7 4.2 7.2 12.7 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal PPR PF01535.20 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.00057 20.0 0.1 0.026 14.7 0.0 2.2 2 0 0 2 2 2 1 PPR repeat TPR_14 PF13428.6 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.0047 17.6 2.9 0.18 12.7 0.4 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat Wzy_C_2 PF11846.8 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.019 14.9 2.1 0.18 11.7 0.4 2.1 1 1 1 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal TPR_MalT PF17874.1 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.023 14.1 2.5 0.082 12.3 1.9 1.8 1 1 0 1 1 1 0 MalT-like TPR region TPR_4 PF07721.14 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.56 11.0 8.3 1 10.2 0.2 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF4795 PF16043.5 NODE_56056_length_305_cov_83.529630_g48120_i0forward_frame_1 - 0.0088 15.7 0.2 0.011 15.4 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) TPR_1 PF00515.28 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 1.7e-14 52.9 9.1 0.00012 21.8 1.7 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 3.6e-14 51.7 5.4 0.00022 21.1 0.9 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 4.7e-14 51.4 5.3 0.00023 21.1 0.3 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 5.9e-14 51.5 4.7 2.2e-08 33.6 0.2 3.1 2 2 1 3 3 3 2 TPR repeat TPR_19 PF14559.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 3.3e-10 40.3 0.0 5.5e-06 26.8 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 4.2e-09 36.1 2.3 5.1e-06 26.5 0.5 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 2.8e-08 33.2 0.3 0.0078 16.2 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 1.6e-06 28.2 2.2 2.8e-06 27.5 2.2 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 1.7e-06 28.6 0.0 9.6e-06 26.2 0.0 2.0 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 2.4e-06 27.8 0.1 0.00017 21.8 0.4 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 1.1e-05 25.8 0.0 0.013 16.3 0.0 2.9 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.00015 22.2 0.2 0.76 10.5 0.1 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.00016 21.7 2.3 0.41 10.8 0.0 3.0 3 0 0 3 3 3 2 Fis1 C-terminal tetratricopeptide repeat TPR_15 PF13429.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0026 17.0 0.0 0.12 11.5 0.0 1.9 1 1 1 2 2 2 1 Tetratricopeptide repeat RPN7 PF10602.9 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0043 16.8 1.2 0.0054 16.5 1.2 1.1 1 0 0 1 1 1 1 26S proteasome subunit RPN7 SNAP PF14938.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0047 16.4 0.9 0.0074 15.7 0.9 1.4 1 1 0 1 1 1 1 Soluble NSF attachment protein, SNAP Coatomer_E PF04733.14 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0052 16.2 0.1 0.0061 16.0 0.1 1.2 1 0 0 1 1 1 1 Coatomer epsilon subunit TPR_10 PF13374.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0061 16.4 0.0 2.4 8.1 0.1 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat CBAH PF02275.18 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.014 15.0 0.1 0.017 14.8 0.1 1.1 1 0 0 1 1 1 0 Linear amide C-N hydrolases, choloylglycine hydrolase family EST1_DNA_bind PF10373.9 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.02 14.4 0.8 0.027 13.9 0.5 1.4 1 1 0 1 1 1 0 Est1 DNA/RNA binding domain TPR_20 PF14561.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.022 15.1 0.1 0.031 14.6 0.1 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat MAT1 PF06391.13 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.034 14.0 2.5 0.048 13.5 2.5 1.2 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 TPR_9 PF13371.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.095 12.9 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat MIT PF04212.18 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.095 12.8 3.0 2.9 8.0 0.3 2.7 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain DUF3856 PF12968.7 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.13 12.3 0.4 0.33 11.0 0.4 1.9 1 1 0 1 1 1 0 Domain of Unknown Function (DUF3856) TPR_MalT PF17874.1 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.22 10.8 0.0 0.94 8.8 0.0 2.0 1 1 0 1 1 1 0 MalT-like TPR region RasGEF_N PF00618.20 NODE_56042_length_305_cov_301.229630_g48106_i0reverse_frame_1 - 0.14 12.4 2.4 0.17 12.1 2.4 1.2 1 0 0 1 1 1 0 RasGEF N-terminal motif CCER1 PF15482.6 NODE_56042_length_305_cov_301.229630_g48106_i0reverse_frame_1 - 0.27 11.1 0.7 0.33 10.8 0.7 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF2740 PF10872.8 NODE_56039_length_305_cov_359.037037_g48103_i0forward_frame_1 - 0.0033 17.3 1.7 0.021 14.7 1.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2740) DUF4710 PF15828.5 NODE_56039_length_305_cov_359.037037_g48103_i0forward_frame_1 - 0.034 14.3 2.9 0.053 13.6 2.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DLIC PF05783.11 NODE_56030_length_306_cov_1.158672_g48094_i0reverse_frame_1 - 0.21 10.4 1.5 0.23 10.3 1.5 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) Rad10 PF03834.14 NODE_56023_length_306_cov_1.468635_g48087_i0reverse_frame_1 - 0.017 15.1 1.0 0.022 14.7 1.0 1.2 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) Herpes_LMP1 PF05297.11 NODE_56013_length_306_cov_1.760148_g48077_i0forward_frame_1 - 8.1 5.5 5.1 8.6 5.4 5.1 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF4485 PF14846.6 NODE_56012_length_306_cov_1.830258_g48076_i0reverse_frame_1 - 0.0087 16.1 0.1 0.014 15.4 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4485) MORN PF02493.20 NODE_56009_length_306_cov_1.915129_g48073_i0reverse_frame_1 - 3.2e-05 23.6 2.2 0.00025 20.7 0.5 2.2 2 0 0 2 2 2 1 MORN repeat PV_NSP1 PF12433.8 NODE_56009_length_306_cov_1.915129_g48073_i0reverse_frame_1 - 0.088 13.2 0.0 0.21 11.9 0.0 1.6 1 1 0 1 1 1 0 Parvovirus non-structural protein 1 Pepdidase_M14_N PF18027.1 NODE_56008_length_306_cov_1.970480_g48072_i0reverse_frame_1 - 2.5e-07 31.0 0.5 2.8e-07 30.9 0.5 1.1 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain Importin_rep_3 PF18806.1 NODE_56006_length_306_cov_2.000000_g48070_i0reverse_frame_1 - 0.1 12.7 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Importin 13 repeat Peptidase_M16_C PF05193.21 NODE_55998_length_306_cov_2.247232_g48062_i0forward_frame_1 - 3.9e-15 56.3 0.1 4.4e-15 56.2 0.1 1.1 1 0 0 1 1 1 1 Peptidase M16 inactive domain MTTB PF06253.11 NODE_55998_length_306_cov_2.247232_g48062_i0forward_frame_1 - 0.015 13.3 0.1 0.016 13.2 0.1 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) DUF4131 PF13567.6 NODE_55996_length_306_cov_2.365314_g48060_i0reverse_frame_1 - 0.065 12.9 1.2 0.075 12.7 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Nitr_red_bet_C PF14711.6 NODE_55993_length_306_cov_2.383764_g48057_i0reverse_frame_1 - 7.2e-31 105.7 0.0 8.3e-31 105.5 0.0 1.0 1 0 0 1 1 1 1 Respiratory nitrate reductase beta C-terminal DUF433 PF04255.14 NODE_55993_length_306_cov_2.383764_g48057_i0reverse_frame_1 - 0.025 14.5 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF433) IclR PF01614.18 NODE_55988_length_306_cov_2.549815_g48052_i0forward_frame_1 - 2e-31 108.5 0.0 2.2e-31 108.3 0.0 1.0 1 0 0 1 1 1 1 Bacterial transcriptional regulator HAD_2 PF13419.6 NODE_55985_length_306_cov_2.678967_g48049_i0reverse_frame_1 - 0.092 12.8 0.4 0.11 12.5 0.4 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Peptidase_C1 PF00112.23 NODE_55984_length_306_cov_2.741697_g48048_i0forward_frame_1 - 2.7e-13 50.5 0.0 3.1e-13 50.3 0.0 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Sensor_TM1 PF13755.6 NODE_55973_length_306_cov_3.335793_g48037_i0forward_frame_1 - 0.08 12.7 0.4 0.14 11.9 0.4 1.5 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain QCR10 PF09796.9 NODE_55973_length_306_cov_3.335793_g48037_i0forward_frame_1 - 0.094 12.8 0.8 0.14 12.3 0.8 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) DUF4378 PF14309.6 NODE_55959_length_306_cov_52.878229_g48023_i0forward_frame_1 - 0.039 14.3 0.9 0.044 14.2 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4378) DUF3283 PF11686.8 NODE_55952_length_306_cov_64.468635_g48016_i0reverse_frame_1 - 0.049 13.5 0.3 0.15 11.9 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3283) PHD PF00628.29 NODE_55952_length_306_cov_64.468635_g48016_i0reverse_frame_1 - 0.08 12.9 5.9 0.14 12.1 5.8 1.5 1 1 0 1 1 1 0 PHD-finger DUF1298 PF06974.13 NODE_55950_length_306_cov_69.335793_g48014_i0reverse_frame_1 - 9e-05 22.5 0.0 0.00011 22.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) CD34_antigen PF06365.12 NODE_55949_length_306_cov_69.483395_g48013_i0reverse_frame_1 - 0.21 11.2 6.8 0.23 11.0 6.8 1.0 1 0 0 1 1 1 0 CD34/Podocalyxin family Lipase_3 PF01764.25 NODE_55941_length_306_cov_89.918819_g48005_i0reverse_frame_1 - 0.15 12.0 0.1 0.3 10.9 0.0 1.5 2 0 0 2 2 2 0 Lipase (class 3) DUF1856 PF08983.10 NODE_55939_length_306_cov_95.535055_g48003_i0reverse_frame_1 - 0.013 15.7 1.1 0.013 15.7 1.1 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF1856) SHIPPO-rpt PF07004.12 NODE_55937_length_306_cov_113.110701_g48001_i0reverse_frame_1 - 0.035 15.0 6.3 2.4 9.2 6.3 2.9 1 1 0 1 1 1 0 Sperm-tail PG-rich repeat Gln-synt_C PF00120.24 NODE_55931_length_306_cov_131.420664_g47995_i0reverse_frame_1 - 0.035 13.1 0.0 0.044 12.8 0.0 1.1 1 0 0 1 1 1 0 Glutamine synthetase, catalytic domain Lactamase_B_6 PF16661.5 NODE_55931_length_306_cov_131.420664_g47995_i0reverse_frame_1 - 0.037 13.5 0.0 0.052 13.0 0.0 1.4 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain OrgA_MxiK PF09482.10 NODE_55929_length_306_cov_142.527675_g46748_i1forward_frame_1 - 0.0032 17.3 0.1 0.0041 17.0 0.1 1.1 1 0 0 1 1 1 1 Bacterial type III secretion apparatus protein (OrgA_MxiK) Tail_VII PF17091.5 NODE_55917_length_306_cov_518.376384_g47982_i0reverse_frame_1 - 0.12 12.3 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Inovirus G7P protein DUF1689 PF07954.11 NODE_55915_length_306_cov_1117.250923_g47980_i0reverse_frame_1 - 0.17 12.3 1.6 0.21 12.0 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1689) SURF4 PF02077.15 NODE_55913_length_306_cov_3592.745387_g47978_i0reverse_frame_1 - 0.12 12.0 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 SURF4 family DUF3482 PF11981.8 NODE_55911_length_306_cov_20615.365314_g47976_i0reverse_frame_1 - 0.087 12.2 8.6 0.11 11.9 8.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) NRDE-2 PF08424.10 NODE_55904_length_307_cov_1.397059_g47969_i0reverse_frame_3 - 0.096 11.8 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference RE_ApaLI PF09499.10 NODE_55903_length_307_cov_1.419118_g47968_i0forward_frame_2 - 0.029 14.1 0.3 0.031 14.0 0.3 1.2 1 0 0 1 1 1 0 ApaLI-like restriction endonuclease Pkinase PF00069.25 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 4.6e-27 95.0 0.1 4.9e-27 94.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 3.7e-14 52.6 0.0 4.7e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 5.2e-05 22.7 0.0 0.00022 20.6 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.00026 19.9 0.0 0.00028 19.8 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.0011 18.3 0.0 0.0012 18.2 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.0024 16.9 0.0 0.0027 16.7 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.012 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family FTA2 PF13095.6 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.024 14.2 0.1 0.03 13.9 0.1 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.15 11.7 0.1 0.18 11.4 0.1 1.2 1 0 0 1 1 1 0 RIO1 family DNA_methylase PF00145.17 NODE_55894_length_307_cov_1.599265_g47959_i0forward_frame_2 - 4.1e-10 39.5 0.0 5e-10 39.2 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase zf-P11 PF03854.14 NODE_55891_length_307_cov_1.716912_g47956_i0forward_frame_2 - 1.8 8.3 9.8 38 4.1 8.2 2.7 1 1 2 3 3 3 0 P-11 zinc finger DUF3900 PF13039.6 NODE_55889_length_307_cov_1.746324_g47954_i0forward_frame_3 - 0.54 10.1 5.4 0.46 10.4 1.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3900) Leader_Erm PF08253.11 NODE_55886_length_307_cov_1.823529_g47951_i0forward_frame_3 - 0.15 12.3 0.1 3.6 8.1 0.0 2.4 2 0 0 2 2 2 0 Erm Leader peptide RVT_1 PF00078.27 NODE_55883_length_307_cov_1.875000_g47948_i0forward_frame_3 - 8.2e-05 22.2 0.0 9.7e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Peptidase_C41 PF05417.11 NODE_55882_length_307_cov_1.897059_g47947_i0forward_frame_2 - 0.11 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Hepatitis E cysteine protease Sugar_tr PF00083.24 NODE_55881_length_307_cov_1.900735_g47946_i0forward_frame_2 - 1.3e-08 34.1 6.6 1.5e-08 34.0 6.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF3511 PF12023.8 NODE_55878_length_307_cov_1.992647_g47943_i0reverse_frame_2 - 0.19 11.6 2.6 10 6.1 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3511) KH_4 PF13083.6 NODE_55873_length_307_cov_2.198529_g47938_i0forward_frame_2 - 0.25 11.3 0.7 0.39 10.6 0.7 1.2 1 0 0 1 1 1 0 KH domain Sugar_tr PF00083.24 NODE_55872_length_307_cov_2.301471_g47937_i0reverse_frame_2 - 3.5e-11 42.6 0.4 3.8e-11 42.5 0.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_55872_length_307_cov_2.301471_g47937_i0reverse_frame_2 - 0.0034 16.4 0.2 0.0039 16.2 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Tricorn_C1 PF14684.6 NODE_55871_length_307_cov_2.327206_g47936_i0reverse_frame_3 - 0.0024 17.9 0.0 0.0045 17.0 0.0 1.4 1 0 0 1 1 1 1 Tricorn protease C1 domain PTase_Orf2 PF11468.8 NODE_55870_length_307_cov_2.349265_g47935_i0reverse_frame_3 - 0.059 12.8 0.0 0.065 12.6 0.0 1.1 1 0 0 1 1 1 0 Aromatic prenyltransferase Orf2 Methyltransf_25 PF13649.6 NODE_55869_length_307_cov_2.400735_g47934_i0reverse_frame_2 - 0.022 15.5 0.0 0.027 15.2 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 NODE_55869_length_307_cov_2.400735_g47934_i0reverse_frame_2 - 0.067 12.9 0.0 0.077 12.7 0.0 1.1 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_12 PF08242.12 NODE_55869_length_307_cov_2.400735_g47934_i0reverse_frame_2 - 0.072 13.8 0.0 0.088 13.6 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Apo-CIII PF05778.12 NODE_55868_length_307_cov_2.422794_g47933_i0reverse_frame_3 - 0.031 13.9 0.2 0.44 10.2 0.2 2.1 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) DUF3086 PF11285.8 NODE_55868_length_307_cov_2.422794_g47933_i0reverse_frame_3 - 0.088 11.9 2.4 0.089 11.9 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) LINES_C PF14695.6 NODE_55864_length_307_cov_2.562500_g47929_i0forward_frame_3 - 0.025 14.0 0.3 0.039 13.4 0.3 1.3 1 0 0 1 1 1 0 Lines C-terminus CCDC142 PF14923.6 NODE_55864_length_307_cov_2.562500_g47929_i0forward_frame_3 - 0.035 12.9 0.3 0.04 12.7 0.3 1.0 1 0 0 1 1 1 0 Coiled-coil protein 142 Bac_rhamnosid6H PF17389.2 NODE_55864_length_307_cov_2.562500_g47929_i0forward_frame_2 - 0.0025 17.1 1.0 0.0031 16.8 1.0 1.0 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain NYD-SP28_assoc PF14775.6 NODE_55860_length_307_cov_2.819853_g47925_i0forward_frame_2 - 1.7e-05 24.8 0.5 2.3e-05 24.4 0.5 1.2 1 0 0 1 1 1 1 Sperm tail C-terminal domain NP1-WLL PF11733.8 NODE_55859_length_307_cov_2.823529_g47924_i0reverse_frame_3 - 0.14 11.9 0.6 0.18 11.6 0.6 1.1 1 0 0 1 1 1 0 Non-capsid protein NP1 V_ATPase_I PF01496.19 NODE_55854_length_307_cov_2.977941_g47919_i0reverse_frame_2 - 1.4e-31 109.3 2.3 1.5e-31 109.2 2.3 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family GAGA PF09237.11 NODE_55852_length_307_cov_3.073529_g47917_i0reverse_frame_2 - 0.058 13.2 0.1 0.1 12.4 0.1 1.4 1 0 0 1 1 1 0 GAGA factor zf-RING_UBOX PF13445.6 NODE_55850_length_307_cov_3.209559_g47915_i0reverse_frame_2 - 0.015 15.3 0.5 0.015 15.3 0.5 2.3 2 1 0 2 2 2 0 RING-type zinc-finger Melittin PF01372.17 NODE_55850_length_307_cov_3.209559_g47915_i0forward_frame_2 - 0.042 13.8 0.5 5.2 7.2 0.0 2.4 2 0 0 2 2 2 0 Melittin IlvC PF01450.19 NODE_55849_length_307_cov_3.238971_g47914_i0forward_frame_2 - 0.035 14.4 0.0 0.044 14.1 0.0 1.1 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain CENP-X PF09415.10 NODE_55842_length_307_cov_33.257353_g47907_i0reverse_frame_3 - 0.0042 17.4 0.2 0.0056 17.0 0.2 1.2 1 0 0 1 1 1 1 CENP-S associating Centromere protein X YvfG PF09628.10 NODE_55842_length_307_cov_33.257353_g47907_i0reverse_frame_2 - 0.015 15.6 0.9 0.023 15.0 0.7 1.4 1 1 0 1 1 1 0 YvfG protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks231.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks231.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks231.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks231.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ion_trans PF00520.31 NODE_55838_length_307_cov_56.147059_g47903_i0forward_frame_2 - 5.6e-12 45.4 1.0 6.2e-12 45.3 1.0 1.0 1 0 0 1 1 1 1 Ion transport protein DUF1617 PF07761.12 NODE_55837_length_307_cov_57.713235_g47902_i0reverse_frame_2 - 0.12 12.5 0.5 0.13 12.3 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1617) zf-C2H2_9 PF16293.5 NODE_55837_length_307_cov_57.713235_g47902_i0forward_frame_3 - 0.11 12.3 0.3 0.18 11.6 0.3 1.4 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) Inhibitor_I29 PF08246.12 NODE_55836_length_307_cov_58.709559_g47901_i0forward_frame_2 - 0.076 13.5 0.0 0.13 12.8 0.0 1.3 1 0 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) Gon7 PF08738.10 NODE_55834_length_307_cov_64.106618_g47899_i0forward_frame_3 - 0.044 13.9 0.7 0.05 13.7 0.7 1.2 1 0 0 1 1 1 0 Gon7 family Thioredoxin_8 PF13905.6 NODE_55823_length_307_cov_81.386029_g47888_i0reverse_frame_2 - 0.076 13.3 0.1 0.11 12.9 0.1 1.4 1 0 0 1 1 1 0 Thioredoxin-like PEX11 PF05648.14 NODE_55822_length_307_cov_83.327206_g47887_i0forward_frame_2 - 0.0041 16.6 0.0 0.0052 16.3 0.0 1.1 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) SH3_16 PF18348.1 NODE_55819_length_307_cov_110.341912_g47884_i0forward_frame_2 - 0.0077 16.0 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial dipeptidyl-peptidase Sh3 domain SH3_3 PF08239.11 NODE_55819_length_307_cov_110.341912_g47884_i0forward_frame_2 - 0.0095 16.2 0.4 0.025 14.9 0.4 1.6 1 1 0 1 1 1 1 Bacterial SH3 domain RRP7 PF12923.7 NODE_55819_length_307_cov_110.341912_g47884_i0forward_frame_2 - 0.012 15.8 1.2 0.018 15.2 1.2 1.3 1 0 0 1 1 1 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain PHO4 PF01384.20 NODE_55818_length_307_cov_115.926471_g47883_i0reverse_frame_3 - 0.13 11.3 0.1 0.14 11.2 0.1 1.0 1 0 0 1 1 1 0 Phosphate transporter family DUF281 PF03436.13 NODE_55817_length_307_cov_130.172794_g47882_i0reverse_frame_2 - 0.072 13.5 0.4 0.13 12.7 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF281) DUF4033 PF13225.6 NODE_55817_length_307_cov_130.172794_g47882_i0forward_frame_2 - 0.092 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) ART PF01129.18 NODE_55815_length_307_cov_158.812500_g47880_i0reverse_frame_2 - 0.073 12.3 0.0 0.095 12.0 0.0 1.2 1 0 0 1 1 1 0 NAD:arginine ADP-ribosyltransferase NADH_B2 PF14813.6 NODE_55814_length_307_cov_169.455882_g47879_i0reverse_frame_3 - 0.17 11.7 0.2 0.34 10.7 0.0 1.6 2 0 0 2 2 2 0 NADH dehydrogenase 1 beta subcomplex subunit 2 Cys_rich_KTR PF14205.6 NODE_55814_length_307_cov_169.455882_g47879_i0reverse_frame_2 - 0.02 14.7 0.0 0.04 13.7 0.0 1.5 1 0 0 1 1 1 0 Cysteine-rich KTR YMF19 PF02326.15 NODE_55814_length_307_cov_169.455882_g47879_i0forward_frame_2 - 0.0053 17.5 1.4 0.0069 17.1 1.4 1.3 1 0 0 1 1 1 1 Plant ATP synthase F0 DUF4834 PF16118.5 NODE_55814_length_307_cov_169.455882_g47879_i0forward_frame_2 - 0.057 14.4 0.1 0.067 14.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) HSA PF07529.13 NODE_55814_length_307_cov_169.455882_g47879_i0forward_frame_2 - 0.097 13.0 0.7 0.3 11.4 0.7 1.7 1 1 1 2 2 2 0 HSA DUF3742 PF12553.8 NODE_55814_length_307_cov_169.455882_g47879_i0forward_frame_2 - 0.15 12.1 0.1 0.23 11.6 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3742) Katanin_con80 PF13925.6 NODE_55807_length_307_cov_329.216912_g47872_i0reverse_frame_2 - 4.3e-18 65.9 0.0 4.7e-18 65.7 0.0 1.0 1 0 0 1 1 1 1 con80 domain of Katanin DUF1071 PF06378.11 NODE_55803_length_307_cov_4807.794118_g47868_i0forward_frame_3 - 0.081 12.5 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) DUF1463 PF07316.11 NODE_55800_length_308_cov_1.260073_g47865_i0reverse_frame_3 - 0.095 12.6 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1463) AF2331-like PF14556.6 NODE_55800_length_308_cov_1.260073_g47865_i0forward_frame_2 - 0.11 13.1 0.1 0.14 12.7 0.1 1.3 1 0 0 1 1 1 0 AF2331-like TadZ_N PF16968.5 NODE_55799_length_308_cov_1.318681_g47864_i0forward_frame_2 - 0.019 14.7 0.2 0.023 14.4 0.2 1.3 1 0 0 1 1 1 0 Pilus assembly protein TadZ N-terminal VirArc_Nuclease PF12187.8 NODE_55798_length_308_cov_1.373626_g47863_i0forward_frame_2 - 0.014 14.9 0.5 0.016 14.7 0.5 1.1 1 0 0 1 1 1 0 Viral/Archaeal nuclease FliP PF00813.20 NODE_55796_length_308_cov_1.498168_g47861_i0reverse_frame_3 - 0.074 12.9 0.4 0.084 12.7 0.4 1.2 1 0 0 1 1 1 0 FliP family Pertactin PF03212.14 NODE_55796_length_308_cov_1.498168_g47861_i0reverse_frame_2 - 0.009 15.9 0.0 0.016 15.1 0.0 1.5 1 0 0 1 1 1 1 Pertactin Sec1 PF00995.23 NODE_55792_length_308_cov_1.615385_g47857_i0reverse_frame_3 - 1.5e-09 37.6 0.3 1.7e-09 37.5 0.3 1.0 1 0 0 1 1 1 1 Sec1 family C2 PF00168.30 NODE_55791_length_308_cov_1.619048_g47856_i0reverse_frame_3 - 7.5e-16 58.3 0.0 8.5e-16 58.1 0.0 1.0 1 0 0 1 1 1 1 C2 domain Zfx_Zfy_act PF04704.13 NODE_55791_length_308_cov_1.619048_g47856_i0reverse_frame_3 - 0.18 10.9 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region RCC1 PF00415.18 NODE_55786_length_308_cov_1.747253_g47851_i0reverse_frame_3 - 0.14 12.8 0.1 0.41 11.3 0.1 1.8 1 1 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat XhlA PF10779.9 NODE_55785_length_308_cov_1.754579_g47850_i0forward_frame_2 - 0.11 12.7 4.7 0.18 12.0 4.7 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Connexin PF00029.19 NODE_55784_length_308_cov_1.765568_g47849_i0forward_frame_3 - 0.0089 15.8 1.7 0.01 15.6 1.7 1.1 1 0 0 1 1 1 1 Connexin DUF3975 PF13126.6 NODE_55777_length_308_cov_1.864469_g47842_i0reverse_frame_3 - 0.025 15.0 0.5 0.038 14.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) DUF603 PF04645.12 NODE_55777_length_308_cov_1.864469_g47842_i0forward_frame_2 - 0.013 15.2 0.9 0.015 15.0 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF603 YqzH PF14164.6 NODE_55775_length_308_cov_1.934066_g47840_i0forward_frame_3 - 0.019 15.0 0.2 0.034 14.2 0.2 1.5 1 1 0 1 1 1 0 YqzH-like protein MADF_DNA_bdg PF10545.9 NODE_55772_length_308_cov_1.996337_g47837_i0forward_frame_2 - 0.046 14.1 0.0 0.071 13.4 0.0 1.2 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like MCM2_N PF12619.8 NODE_55769_length_308_cov_2.150183_g47834_i0reverse_frame_2 - 1e-14 55.1 18.3 1.1e-14 54.9 18.3 1.0 1 0 0 1 1 1 1 Mini-chromosome maintenance protein 2 SO_alpha_A3 PF17806.1 NODE_55769_length_308_cov_2.150183_g47834_i0reverse_frame_2 - 0.0037 17.6 0.0 0.0047 17.2 0.0 1.2 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain Telomere_Sde2_2 PF13297.6 NODE_55767_length_308_cov_2.194139_g47832_i0reverse_frame_3 - 0.13 11.9 0.1 0.2 11.3 0.1 1.2 1 0 0 1 1 1 0 Telomere stability C-terminal Pro_sub2 PF18513.1 NODE_55765_length_308_cov_2.227106_g47830_i0forward_frame_3 - 0.014 15.5 0.5 0.018 15.2 0.5 1.3 1 0 0 1 1 1 0 Prodomain subtilisin 2 TraN PF06986.11 NODE_55764_length_308_cov_2.289377_g47829_i0reverse_frame_3 - 0.015 15.0 0.7 0.017 14.8 0.7 1.0 1 0 0 1 1 1 0 Type-1V conjugative transfer system mating pair stabilisation Telomere_Sde2_2 PF13297.6 NODE_55761_length_308_cov_2.336996_g47826_i0forward_frame_3 - 0.13 11.9 0.1 0.2 11.3 0.1 1.2 1 0 0 1 1 1 0 Telomere stability C-terminal MbtH PF03621.13 NODE_55760_length_308_cov_2.340659_g47825_i0reverse_frame_3 - 0.18 11.3 0.7 0.31 10.5 0.7 1.4 1 0 0 1 1 1 0 MbtH-like protein Tropomyosin_1 PF12718.7 NODE_55755_length_308_cov_2.534799_g47820_i0forward_frame_2 - 0.024 14.8 0.2 0.031 14.4 0.2 1.2 1 0 0 1 1 1 0 Tropomyosin like DUF4328 PF14219.6 NODE_55754_length_308_cov_2.721612_g47819_i0reverse_frame_2 - 0.017 14.7 3.8 5.2 6.6 4.2 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4328) OapA_N PF08525.11 NODE_55754_length_308_cov_2.721612_g47819_i0forward_frame_2 - 1.4 8.9 4.5 6.3 6.9 0.2 2.7 3 0 0 3 3 3 0 Opacity-associated protein A N-terminal motif Tmemb_55A PF09788.9 NODE_55752_length_308_cov_2.857143_g47817_i0reverse_frame_2 - 0.053 12.6 4.4 0.063 12.4 4.4 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A DUF4184 PF13803.6 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_2 - 0.17 11.6 0.1 0.19 11.4 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4184) DUF5400 PF17379.2 NODE_55749_length_308_cov_3.040293_g47814_i0forward_frame_2 - 0.0075 16.7 1.5 0.0091 16.4 1.5 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5400) Usher PF00577.20 NODE_55748_length_308_cov_3.113553_g47813_i0reverse_frame_3 - 6.4e-43 147.4 0.3 6.9e-43 147.3 0.3 1.0 1 0 0 1 1 1 1 Outer membrane usher protein Kelch_4 PF13418.6 NODE_55745_length_308_cov_3.267399_g47810_i0forward_frame_2 - 0.012 15.6 0.0 0.021 14.8 0.0 1.4 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_55745_length_308_cov_3.267399_g47810_i0forward_frame_2 - 0.028 14.7 0.0 0.11 12.8 0.0 1.8 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_55745_length_308_cov_3.267399_g47810_i0forward_frame_2 - 0.038 14.0 0.0 0.069 13.2 0.0 1.4 1 0 0 1 1 1 0 Kelch motif DUF4614 PF15391.6 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_3 - 0.66 10.0 11.9 0.78 9.7 11.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) DUF4149 PF13664.6 NODE_55744_length_308_cov_3.326007_g47809_i0forward_frame_2 - 0.013 15.8 1.7 0.023 15.0 1.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4149) DUF5445 PF17520.2 NODE_55742_length_308_cov_3.901099_g47807_i0reverse_frame_2 - 5.2 7.0 9.6 0.81 9.6 1.3 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5445) Topoisom_I PF01028.20 NODE_55742_length_308_cov_3.901099_g47807_i0forward_frame_2 - 4e-36 124.4 3.1 4.3e-36 124.3 3.1 1.0 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core PAC1 PF16094.5 NODE_55742_length_308_cov_3.901099_g47807_i0forward_frame_2 - 0.011 14.9 0.1 0.014 14.6 0.1 1.1 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Hira PF07569.11 NODE_55735_length_308_cov_49.655678_g47800_i0forward_frame_2 - 0.063 13.0 0.0 0.085 12.6 0.0 1.1 1 0 0 1 1 1 0 TUP1-like enhancer of split Imm75 PF15660.6 NODE_55735_length_308_cov_49.655678_g47800_i0forward_frame_2 - 0.1 12.9 0.0 0.21 11.9 0.0 1.6 1 1 1 2 2 2 0 Putative Immunity protein 75 ASFV_360 PF01671.16 NODE_55734_length_308_cov_50.717949_g47799_i0forward_frame_2 - 0.0015 18.1 0.5 0.0016 18.0 0.5 1.1 1 0 0 1 1 1 1 African swine fever virus multigene family 360 protein Porin_3 PF01459.22 NODE_55732_length_308_cov_54.216117_g47797_i0forward_frame_3 - 0.018 14.5 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic porin YuiB PF14068.6 NODE_55724_length_308_cov_67.340659_g47789_i0reverse_frame_2 - 3.8 8.2 8.7 0.15 12.6 1.9 1.9 1 1 0 2 2 2 0 Putative membrane protein Ribosomal_60s PF00428.19 NODE_55722_length_308_cov_69.835165_g47787_i0reverse_frame_3 - 0.042 14.4 0.4 0.052 14.1 0.4 1.2 1 0 0 1 1 1 0 60s Acidic ribosomal protein RhoGAP-FF1 PF16512.5 NODE_55720_length_308_cov_73.860806_g47785_i0forward_frame_2 - 0.072 13.8 0.4 0.1 13.3 0.4 1.2 1 0 0 1 1 1 0 p190-A and -B Rho GAPs FF domain Toxin_33 PF08121.11 NODE_55719_length_308_cov_74.871795_g47784_i0forward_frame_2 - 0.2 11.5 9.9 0.52 10.2 9.9 1.7 1 0 0 1 1 1 0 Waglerin family COX14 PF14880.6 NODE_55714_length_308_cov_99.428571_g47779_i0reverse_frame_2 - 0.044 13.6 0.2 0.19 11.6 0.1 1.9 2 0 0 2 2 2 0 Cytochrome oxidase c assembly T2SSM_b PF10741.9 NODE_55713_length_308_cov_100.556777_g47778_i0forward_frame_2 - 0.054 13.3 0.3 0.067 13.0 0.3 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M subtype b Sp38 PF07354.12 NODE_55711_length_308_cov_121.216117_g47776_i0forward_frame_3 - 0.068 12.6 2.3 0.097 12.1 2.3 1.2 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) Sarcoglycan_1 PF04790.13 NODE_55708_length_308_cov_158.989011_g47773_i0forward_frame_3 - 0.037 13.4 0.1 0.039 13.3 0.1 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein DUF3128 PF11326.8 NODE_55707_length_308_cov_159.252747_g47772_i0reverse_frame_3 - 0.057 13.8 0.2 0.084 13.2 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3128) MORN PF02493.20 NODE_55700_length_308_cov_342.516484_g47765_i0forward_frame_3 - 3.1e-18 64.5 21.3 4.1e-07 29.5 0.9 3.8 4 0 0 4 4 4 3 MORN repeat Calponin PF00402.18 NODE_55698_length_308_cov_1117.018315_g47763_i0reverse_frame_2 - 0.33 10.6 1.3 0.37 10.5 0.2 1.6 2 0 0 2 2 2 0 Calponin family repeat Thionin PF00321.17 NODE_55697_length_308_cov_1131.948718_g47762_i0reverse_frame_3 - 0.55 10.8 5.9 0.59 10.7 0.0 2.5 2 1 0 2 2 2 0 Plant thionin zf-C5HC2 PF02928.16 NODE_55697_length_308_cov_1131.948718_g47762_i0forward_frame_3 - 0.0002 21.7 11.2 0.00031 21.1 11.2 1.3 1 0 0 1 1 1 1 C5HC2 zinc finger DUF3482 PF11981.8 NODE_55695_length_308_cov_20301.783883_g47760_i0forward_frame_3 - 0.007 15.8 5.6 0.008 15.6 5.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) 7tm_1 PF00001.21 NODE_55691_length_309_cov_1.218978_g47756_i0reverse_frame_3 - 4.1 6.6 6.4 21 4.3 6.4 1.8 1 1 1 2 2 2 0 7 transmembrane receptor (rhodopsin family) GCR1_C PF12550.8 NODE_55686_length_309_cov_1.591241_g47751_i0forward_frame_2 - 0.094 13.0 0.3 0.18 12.2 0.3 1.6 1 1 0 1 1 1 0 Transcriptional activator of glycolytic enzymes TRP PF06011.12 NODE_55685_length_309_cov_1.635036_g47750_i0forward_frame_3 - 0.029 13.1 0.0 0.033 12.9 0.0 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel PriCT_2 PF08707.11 NODE_55685_length_309_cov_1.635036_g47750_i0forward_frame_2 - 0.06 13.7 0.1 0.086 13.2 0.1 1.2 1 0 0 1 1 1 0 Primase C terminal 2 (PriCT-2) VWA_N PF08399.11 NODE_55684_length_309_cov_1.656934_g47749_i0reverse_frame_2 - 0.0052 17.3 2.4 0.0069 16.9 2.4 1.1 1 0 0 1 1 1 1 VWA N-terminal zf-C3HC4_2 PF13923.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 8.8e-05 22.3 3.4 0.00077 19.3 3.9 2.0 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3H2C3 PF17122.5 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.00018 21.5 7.5 0.00042 20.3 7.7 1.6 1 1 0 1 1 1 1 Zinc-finger zf-RING_UBOX PF13445.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.00027 20.9 4.2 0.00074 19.5 4.1 1.8 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.0067 16.4 5.4 0.011 15.7 5.4 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.026 14.8 5.2 0.056 13.8 5.2 1.6 1 1 0 1 1 1 0 Ring finger domain zf-RING_6 PF14835.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.035 14.0 0.2 0.047 13.6 0.2 1.2 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Prok-RING_4 PF14447.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.036 13.9 1.8 0.064 13.1 1.8 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.11 12.1 6.5 1.4 8.6 7.1 2.1 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.17 11.7 4.5 1.3 8.9 4.6 2.1 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.52 10.6 6.8 5.9 7.3 6.7 2.2 1 1 1 2 2 2 0 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.64 9.8 9.1 0.22 11.3 4.3 2.3 2 1 0 2 2 2 0 RING-like zinc finger GDP_Man_Dehyd PF16363.5 NODE_55679_length_309_cov_1.737226_g47744_i0forward_frame_2 - 7.9e-19 68.2 0.0 8.4e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_55679_length_309_cov_1.737226_g47744_i0forward_frame_2 - 1.8e-11 44.0 0.1 4.6e-11 42.6 0.0 1.6 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family DNA_pol3_tau_5 PF12170.8 NODE_55677_length_309_cov_1.901460_g47742_i0reverse_frame_2 - 0.064 13.3 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase III tau subunit V interacting with alpha Pox_A32 PF04665.12 NODE_55676_length_309_cov_1.901460_g47741_i0reverse_frame_2 - 2.3e-06 27.3 0.6 2.7e-06 27.0 0.6 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein CLU_N PF15044.6 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_3 - 0.0012 19.1 0.4 0.0019 18.5 0.4 1.3 1 0 0 1 1 1 1 Mitochondrial function, CLU-N-term HOOK PF05622.12 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.0054 15.0 9.2 0.0071 14.6 9.2 1.3 1 1 0 1 1 1 1 HOOK protein Cep57_CLD_2 PF14197.6 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.006 16.6 3.9 0.49 10.5 0.1 2.5 2 1 0 2 2 2 2 Centrosome localisation domain of PPC89 FliJ PF02050.16 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.014 15.6 6.0 0.02 15.1 6.0 1.3 1 0 0 1 1 1 0 Flagellar FliJ protein SOGA PF11365.8 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.025 15.7 3.5 0.039 15.1 3.5 1.3 1 0 0 1 1 1 0 Protein SOGA Fib_alpha PF08702.10 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.046 13.9 1.4 0.046 13.9 1.4 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.27 10.1 11.5 0.32 9.8 11.5 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein YlqD PF11068.8 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.75 10.2 10.8 0.23 11.8 1.9 2.0 1 1 1 2 2 2 0 YlqD protein SlyX PF04102.12 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.75 10.5 3.4 8.2 7.1 0.8 2.1 1 1 1 2 2 2 0 SlyX DUF4407 PF14362.6 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 1.6 8.0 8.2 1.7 8.0 8.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YabA PF06156.13 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 3.2 8.4 11.7 3.6 8.3 2.3 2.0 1 1 1 2 2 2 0 Initiation control protein YabA MerR PF00376.23 NODE_55672_length_309_cov_2.010949_g47737_i0forward_frame_2 - 0.094 12.5 0.0 0.35 10.7 0.0 2.0 1 0 0 1 1 1 0 MerR family regulatory protein Nitroreductase PF00881.24 NODE_55669_length_309_cov_2.204380_g47734_i0forward_frame_3 - 4.8e-10 39.7 0.1 6.1e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 NODE_55669_length_309_cov_2.204380_g47734_i0forward_frame_3 - 0.016 14.8 0.0 0.019 14.6 0.0 1.1 1 0 0 1 1 1 0 Putative TM nitroreductase Kinesin PF00225.23 NODE_55668_length_309_cov_2.262774_g47733_i0reverse_frame_3 - 0.0002 20.4 0.1 0.00021 20.3 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_55668_length_309_cov_2.262774_g47733_i0reverse_frame_3 - 0.013 15.4 0.3 0.02 14.9 0.3 1.4 1 1 0 1 1 1 0 Microtubule binding DUF92 PF01940.16 NODE_55664_length_309_cov_2.467153_g47729_i0reverse_frame_2 - 0.022 14.2 0.4 0.024 14.0 0.4 1.1 1 0 0 1 1 1 0 Integral membrane protein DUF92 DOMON PF03351.17 NODE_55661_length_309_cov_2.656934_g47726_i0reverse_frame_3 - 6.3e-09 36.1 0.0 7.3e-09 35.9 0.0 1.1 1 0 0 1 1 1 1 DOMON domain Glyco_hydro_65C PF03633.15 NODE_55661_length_309_cov_2.656934_g47726_i0reverse_frame_3 - 0.08 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain CTD_bind PF04818.13 NODE_55660_length_309_cov_2.729927_g47725_i0reverse_frame_2 - 0.026 15.4 0.1 0.045 14.6 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase II-binding domain. TPR_MLP1_2 PF07926.12 NODE_55659_length_309_cov_2.759124_g47724_i0reverse_frame_3 - 0.0077 16.3 4.0 0.011 15.8 4.0 1.3 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein GARP PF16731.5 NODE_55659_length_309_cov_2.759124_g47724_i0reverse_frame_3 - 0.027 14.1 1.0 0.033 13.9 1.0 1.1 1 0 0 1 1 1 0 Glutamic acid/alanine-rich protein of Trypanosoma ZapB PF06005.12 NODE_55659_length_309_cov_2.759124_g47724_i0reverse_frame_2 - 0.088 13.3 3.9 0.15 12.5 3.9 1.3 1 0 0 1 1 1 0 Cell division protein ZapB BESS PF02944.20 NODE_55657_length_309_cov_2.937956_g47722_i0reverse_frame_2 - 0.032 14.1 2.0 0.22 11.4 0.2 2.3 2 0 0 2 2 2 0 BESS motif TEA PF01285.18 NODE_55657_length_309_cov_2.937956_g47722_i0reverse_frame_2 - 0.073 13.2 0.5 0.18 11.9 0.4 1.7 1 1 1 2 2 2 0 TEA/ATTS domain HTH_Tnp_ISL3 PF13542.6 NODE_55657_length_309_cov_2.937956_g47722_i0forward_frame_2 - 0.092 12.2 0.8 0.15 11.5 0.8 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Pkinase PF00069.25 NODE_55656_length_309_cov_2.948905_g47721_i0reverse_frame_3 - 3.3e-23 82.4 0.3 3.7e-23 82.2 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_55656_length_309_cov_2.948905_g47721_i0reverse_frame_3 - 2.1e-08 33.8 0.0 2.1e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Seadorna_VP7 PF07387.11 NODE_55656_length_309_cov_2.948905_g47721_i0reverse_frame_3 - 1.9e-05 23.9 0.1 2.3e-05 23.6 0.1 1.2 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 NODE_55656_length_309_cov_2.948905_g47721_i0reverse_frame_3 - 0.00024 21.1 0.0 0.00025 21.1 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 NODE_55656_length_309_cov_2.948905_g47721_i0reverse_frame_3 - 0.0044 16.4 0.1 0.0051 16.2 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family YukC PF10140.9 NODE_55656_length_309_cov_2.948905_g47721_i0reverse_frame_3 - 0.0057 15.5 0.0 0.0067 15.3 0.0 1.0 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukC Kinase-like PF14531.6 NODE_55656_length_309_cov_2.948905_g47721_i0reverse_frame_3 - 0.0098 15.2 0.0 0.011 15.1 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_55656_length_309_cov_2.948905_g47721_i0reverse_frame_3 - 0.015 14.1 0.1 0.017 14.0 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase Pox_ser-thr_kin PF05445.11 NODE_55656_length_309_cov_2.948905_g47721_i0reverse_frame_3 - 0.024 13.6 0.0 0.025 13.5 0.0 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase DUF2374 PF09574.10 NODE_55656_length_309_cov_2.948905_g47721_i0forward_frame_3 - 0.034 14.0 0.2 0.055 13.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (Duf2374) Transposase_mut PF00872.18 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_2 - 0.098 11.5 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Transposase, Mutator family Carla_C4 PF01623.17 NODE_55654_length_309_cov_3.339416_g47719_i0reverse_frame_3 - 0.092 12.7 0.1 0.14 12.1 0.1 1.3 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein FUSC-like PF12805.7 NODE_55654_length_309_cov_3.339416_g47719_i0reverse_frame_2 - 0.079 12.0 0.0 0.099 11.7 0.0 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Treacle PF03546.14 NODE_55654_length_309_cov_3.339416_g47719_i0forward_frame_2 - 0.06 12.2 0.1 0.068 12.0 0.1 1.0 1 0 0 1 1 1 0 Treacher Collins syndrome protein Treacle TMEM247 PF15444.6 NODE_55649_length_309_cov_4.229927_g47714_i0forward_frame_3 - 4.3 7.3 6.0 2.7 8.0 4.8 1.3 1 1 0 1 1 1 0 Transmembrane protein 247 Lamprin PF06403.11 NODE_55645_length_309_cov_5.500000_g47710_i0forward_frame_3 - 3 7.8 18.1 2.4 8.1 5.7 2.1 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_55645_length_309_cov_5.500000_g47710_i0forward_frame_2 - 2.5 8.0 20.9 0.36 10.8 5.8 2.1 1 1 1 2 2 2 0 Lamprin MFA1_2 PF17317.2 NODE_55643_length_309_cov_14.368613_g47708_i0reverse_frame_3 - 0.3 10.9 2.2 0.48 10.2 2.2 1.3 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 EamA PF00892.20 NODE_55642_length_309_cov_24.839416_g47707_i0forward_frame_3 - 0.00013 22.2 0.9 0.00016 21.8 0.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family Response_reg PF00072.24 NODE_55641_length_309_cov_36.682482_g47706_i0forward_frame_3 - 5.6e-12 45.8 0.0 6.5e-12 45.6 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain DUF5602 PF18197.1 NODE_55638_length_309_cov_48.642336_g47703_i0forward_frame_2 - 0.056 13.9 0.3 0.11 13.0 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5602) GvpL_GvpF PF06386.11 NODE_55635_length_309_cov_56.346715_g47700_i0reverse_frame_3 - 0.17 11.8 0.4 0.2 11.6 0.4 1.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF TMEM208_SND2 PF05620.11 NODE_55635_length_309_cov_56.346715_g47700_i0forward_frame_2 - 9 6.0 7.1 1 9.1 2.3 1.8 1 1 1 2 2 2 0 SRP-independent targeting protein 2/TMEM208 MtN3_slv PF03083.16 NODE_55634_length_309_cov_58.959854_g47699_i0reverse_frame_2 - 0.056 13.5 0.2 0.13 12.3 0.2 1.7 1 1 0 1 1 1 0 Sugar efflux transporter for intercellular exchange CDP-OH_P_tran_2 PF08009.11 NODE_55633_length_309_cov_60.065693_g47698_i0forward_frame_3 - 0.14 12.1 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase 2 DUF551 PF04448.12 NODE_55631_length_309_cov_61.605839_g47696_i0reverse_frame_3 - 0.04 14.9 0.1 0.058 14.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF551) RepB-RCR_reg PF10723.9 NODE_55624_length_309_cov_73.875912_g47689_i0reverse_frame_3 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Replication regulatory protein RepB CdiI_3 PF18616.1 NODE_55623_length_309_cov_76.543796_g47688_i0reverse_frame_3 - 0.079 12.9 0.0 0.18 11.7 0.0 1.7 1 1 1 2 2 2 0 CDI immunity proteins DAG1 PF05454.11 NODE_55618_length_309_cov_84.905109_g47683_i0forward_frame_3 - 0.015 14.7 2.5 0.016 14.6 2.5 1.2 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) DUF434 PF04256.12 NODE_55616_length_309_cov_92.040146_g47681_i0forward_frame_3 - 0.059 13.1 0.0 0.083 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF434) FAINT PF04385.15 NODE_55613_length_309_cov_104.386861_g47678_i0reverse_frame_3 - 0.091 12.8 0.3 0.14 12.3 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function, DUF529 DUF4834 PF16118.5 NODE_55611_length_309_cov_111.532847_g47676_i0forward_frame_2 - 0.064 14.2 0.0 0.074 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) LAP1C PF05609.12 NODE_55606_length_309_cov_142.072993_g47671_i0forward_frame_2 - 1.8 7.5 12.3 1.9 7.5 12.3 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) PBP_sp32 PF07222.12 NODE_55606_length_309_cov_142.072993_g47671_i0forward_frame_2 - 2.3 7.6 8.0 2.9 7.3 8.0 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Paramyxo_ncap PF00973.19 NODE_55606_length_309_cov_142.072993_g47671_i0forward_frame_2 - 2.7 6.8 8.2 2.8 6.8 8.2 1.0 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Membralin PF09746.9 NODE_55606_length_309_cov_142.072993_g47671_i0forward_frame_2 - 8.7 5.3 5.9 9.3 5.2 5.9 1.0 1 0 0 1 1 1 0 Tumour-associated protein Cys_rich_CPXG PF14255.6 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.00096 19.0 11.2 0.35 10.8 0.5 3.2 3 0 0 3 3 3 3 Cysteine-rich CPXCG RMI1_N PF08585.12 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.014 15.2 0.0 5.6 6.7 0.0 2.5 1 1 2 3 3 3 0 RecQ mediated genome instability protein Fer4_12 PF13353.6 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.13 12.5 4.2 37 4.6 0.1 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain DUF2367 PF10164.9 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.15 12.5 4.0 5.8 7.5 0.1 2.7 1 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2367) Toxin_5 PF05294.13 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.43 11.0 13.0 11 6.6 0.4 3.2 3 0 0 3 3 3 0 Scorpion short toxin Zn_ribbon_SprT PF17283.2 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 7.9 6.5 15.5 16 5.5 0.9 3.1 3 0 0 3 3 3 0 SprT-like zinc ribbon domain PCSK9_C3 PF18463.1 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_2 - 0.011 16.0 2.0 0.1 12.9 2.8 1.9 1 1 1 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Suppressor_APC PF11414.8 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_3 - 1.4 9.0 5.5 20 5.3 0.3 2.9 1 1 2 3 3 3 0 Adenomatous polyposis coli tumour suppressor protein Stonin2_N PF12016.8 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_3 - 3.4 7.0 7.0 1.4 8.3 1.8 1.9 1 1 1 2 2 2 0 Stonin 2 DUF2213 PF09979.9 NODE_55603_length_309_cov_176.372263_g47668_i0reverse_frame_2 - 0.0015 18.5 0.2 0.0018 18.3 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2213) DUF1690 PF07956.11 NODE_55603_length_309_cov_176.372263_g47668_i0reverse_frame_2 - 0.15 12.5 8.3 0.16 12.4 8.3 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) Ndc1_Nup PF09531.10 NODE_55603_length_309_cov_176.372263_g47668_i0forward_frame_2 - 2.4 6.7 10.2 2.5 6.7 10.2 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup RNA_pol_Rpc4 PF05132.14 NODE_55595_length_309_cov_462.751825_g47660_i0forward_frame_3 - 0.77 10.2 8.3 0.9 10.0 8.3 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 RR_TM4-6 PF06459.12 NODE_55595_length_309_cov_462.751825_g47660_i0forward_frame_3 - 2.3 8.0 10.8 2.7 7.8 10.8 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 NODE_55595_length_309_cov_462.751825_g47660_i0forward_frame_3 - 2.3 6.9 6.2 2.4 6.8 6.2 1.0 1 0 0 1 1 1 0 Presenilin Hid1 PF12722.7 NODE_55595_length_309_cov_462.751825_g47660_i0forward_frame_3 - 9.5 4.2 6.0 9.7 4.2 6.0 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein CBP_BcsG PF11658.8 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.0035 15.8 0.1 0.004 15.6 0.1 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG OmpH PF03938.14 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.016 15.6 7.0 0.022 15.1 7.0 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) ETRAMP PF09716.10 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.037 14.1 12.5 1.2 9.3 12.5 2.1 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF4446 PF14584.6 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.041 13.9 3.0 0.052 13.5 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) PSI_PsaF PF02507.15 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.073 12.9 0.2 0.085 12.7 0.2 1.1 1 0 0 1 1 1 0 Photosystem I reaction centre subunit III DUF883 PF05957.13 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.21 12.2 1.9 0.29 11.8 1.9 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) EMC3_TMCO1 PF01956.16 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.7 9.6 3.8 0.91 9.2 3.8 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like OAD_gamma PF04277.13 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 2.5 8.7 6.4 7.3 7.3 6.4 1.7 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain TMPIT PF07851.13 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 3.4 6.8 6.7 3 7.0 5.9 1.3 1 1 0 1 1 1 0 TMPIT-like protein Hom_end_hint PF05203.16 NODE_55591_length_309_cov_56435.905109_g47656_i0reverse_frame_3 - 0.067 13.1 0.7 0.073 13.0 0.7 1.0 1 0 0 1 1 1 0 Hom_end-associated Hint NCD1 PF04904.13 ORF99159 - 0.12 12.4 1.9 1.6 8.8 0.2 2.6 2 1 1 3 3 3 0 NAB conserved region 1 (NCD1) DHHC PF01529.20 ORF99159 - 0.26 11.4 8.1 0.32 11.1 8.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Coprogen_oxidas PF01218.18 ORF99087 - 0.00025 19.9 0.1 0.00033 19.5 0.1 1.2 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase Viral_RdRp_C PF17501.2 ORF99087 - 0.064 13.7 0.7 0.094 13.2 0.7 1.3 1 0 0 1 1 1 0 Viral RNA-directed RNA polymerase PS_Dcarbxylase PF02666.15 ORF99023 - 0.029 13.9 0.0 0.029 13.9 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylserine decarboxylase FANCI_S1-cap PF14674.6 ORF99021 - 0.12 12.5 0.3 0.54 10.4 0.1 1.9 2 0 0 2 2 2 0 FANCI solenoid 1 cap ABC_tran PF00005.27 ORF98818 - 9e-08 32.7 0.1 2.1e-07 31.6 0.1 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF98818 - 0.00011 21.7 0.5 0.00014 21.4 0.5 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Robl_LC7 PF03259.17 ORF96872 - 1.2e-12 47.4 0.0 1.4e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF4822 PF16103.5 ORF96872 - 0.078 13.3 0.1 0.1 12.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4822) Ribosomal_S14 PF00253.21 ORF96603 - 1.9e-07 30.7 0.0 1.9e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e MORN PF02493.20 ORF95597 - 2.3e-24 83.8 30.6 4.1e-08 32.7 2.0 5.1 5 0 0 5 5 5 5 MORN repeat DUF4286 PF14114.6 ORF95257 - 0.06 13.8 0.0 0.076 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4286) Ras PF00071.22 ORF95104 - 2.9e-12 46.5 0.0 3.4e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 Ras family dCMP_cyt_deam_1 PF00383.23 ORF94925 - 2.2e-08 33.9 0.0 2.7e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 ORF94925 - 6.1e-07 29.3 0.0 7.7e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase Ribosomal_L27_C PF18471.1 ORF94925 - 0.046 13.1 2.2 0.051 13.0 1.0 1.6 2 0 0 2 2 2 0 Ribosomal L27 protein C-terminal domain P120R PF08062.11 ORF94268 - 3.4 8.1 10.2 15 6.1 0.4 3.3 2 1 0 2 2 2 0 P120R (NUC006) repeat Neur_chan_memb PF02932.16 ORF94268 - 8.4 6.4 7.0 9 6.3 7.0 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3762 PF12591.8 ORF93283 - 0.19 12.0 0.5 0.29 11.4 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3762) AbiEi_3 PF11459.8 ORF9327 - 0.012 15.3 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin, Type IV TA system MafB PF06255.13 ORF9253 - 0.026 14.0 0.0 0.029 13.8 0.0 1.0 1 0 0 1 1 1 0 Neisseria toxin MafB Spore_III_AB PF09548.10 ORF9253 - 0.059 13.5 1.4 0.068 13.3 1.4 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) YqzH PF14164.6 ORF9253 - 0.061 13.4 1.5 0.27 11.4 0.1 2.5 2 2 1 3 3 3 0 YqzH-like protein DUF816 PF05674.12 ORF9253 - 0.16 11.9 5.2 0.39 10.6 4.7 1.7 1 1 1 2 2 2 0 Baculovirus protein of unknown function (DUF816) Homeobox_KN PF05920.11 ORF92155 - 6.8e-18 64.3 0.4 1.4e-17 63.3 0.4 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF92155 - 1.5e-10 40.8 0.9 2.5e-10 40.0 0.9 1.5 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF92155 - 0.0022 17.8 0.2 0.0059 16.4 0.0 1.8 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT TF_AP-2 PF03299.14 ORF91963 - 0.031 14.2 0.3 0.032 14.2 0.3 1.2 1 0 0 1 1 1 0 Transcription factor AP-2 Aldo_ket_red PF00248.21 ORF91175 - 0.062 12.5 0.0 0.068 12.4 0.0 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family Pkinase PF00069.25 ORF91149 - 7.4e-05 22.2 0.1 0.00073 19.0 0.0 1.9 2 0 0 2 2 2 2 Protein kinase domain Sucrose_synth PF00862.19 ORF90813 - 0.04 12.2 1.6 0.051 11.9 1.6 1.1 1 0 0 1 1 1 0 Sucrose synthase Tub_N PF16322.5 ORF90813 - 3.5 8.0 10.9 4.1 7.8 10.9 1.1 1 0 0 1 1 1 0 Tubby N-terminal PorA PF11271.8 ORF90811 - 0.082 12.2 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 Porin PorA BLI1 PF17324.2 ORF90811 - 0.32 11.7 9.2 1.4 9.6 9.2 1.8 1 1 0 1 1 1 0 BLOC-1 interactor 1 DUF5527 PF17665.1 ORF90690 - 0.056 13.0 0.1 0.1 12.1 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5527) DUF3412 PF11892.8 ORF90413 - 3.5e-47 159.5 0.0 3.8e-47 159.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3412) CSD PF00313.22 ORF89536 - 2.8e-18 65.5 0.2 3.6e-18 65.2 0.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF89536 - 0.015 14.9 0.8 0.027 14.2 0.8 1.5 1 0 0 1 1 1 0 Ribonuclease B OB domain HlyE PF06109.13 ORF88678 - 5.9e-40 137.5 1.0 6.9e-40 137.3 1.0 1.0 1 0 0 1 1 1 1 Haemolysin E (HlyE) DUF3330 PF11809.8 ORF87732 - 0.072 13.2 3.2 0.42 10.7 1.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3330) Gcd10p PF04189.13 ORF87525 - 0.092 11.8 0.2 0.11 11.6 0.2 1.3 1 1 0 1 1 1 0 Gcd10p family FSH1 PF03959.13 ORF87259 - 1.5e-05 24.7 0.0 1.8e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase (FSH1) DCB PF16213.5 ORF86755 - 0.011 15.5 0.3 0.013 15.2 0.3 1.1 1 0 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 Glyco_hydro_20b PF02838.15 ORF86755 - 0.086 13.6 0.0 0.13 13.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, domain 2 DUF1290 PF06947.12 ORF86651 - 0.028 14.5 2.5 2.1 8.5 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1290) DUF2254 PF10011.9 ORF86651 - 0.53 9.1 2.0 0.62 8.8 2.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) RNA_pol_Rpb1_1 PF04997.12 ORF86510 - 4.6e-12 45.9 0.0 6.2e-12 45.5 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 Phage_terminase PF10668.9 ORF86199 - 0.085 12.9 0.3 0.17 11.9 0.3 1.5 1 0 0 1 1 1 0 Phage terminase small subunit Na_Ala_symp PF01235.17 ORF86199 - 0.1 11.9 0.9 0.13 11.6 0.9 1.0 1 0 0 1 1 1 0 Sodium:alanine symporter family Myb_DNA-bind_6 PF13921.6 ORF8568 - 0.81 10.0 6.0 1.3 9.3 3.1 2.2 1 1 1 2 2 2 0 Myb-like DNA-binding domain Herpes_UL87 PF03043.14 ORF85514 - 0.061 11.8 0.0 0.065 11.7 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL87 family DUF872 PF05915.12 ORF85308 - 0.17 12.1 0.3 1.3 9.2 0.3 1.9 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Tmemb_cc2 PF10267.9 ORF85298 - 0.011 15.0 5.4 0.01 15.0 5.4 1.0 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein DUF1980 PF09323.10 ORF85298 - 3.1 7.7 6.0 3.6 7.5 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks232.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks232.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks232.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks232.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DEADboxA PF12343.8 ORF85066 - 0.013 16.1 3.7 0.02 15.4 3.7 1.3 1 0 0 1 1 1 0 Cold shock protein DEAD box A Form-deh_trans PF09163.11 ORF85066 - 0.18 11.6 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 Formate dehydrogenase N, transmembrane MVL PF12151.8 ORF83457 - 0.027 14.3 0.2 0.082 12.8 0.2 1.9 1 0 0 1 1 1 0 Mannan-binding protein Keratin_B2 PF01500.17 ORF83457 - 0.3 11.0 2.7 0.82 9.6 2.7 1.8 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein ATP-cone PF03477.16 ORF82841 - 7.2e-16 58.5 0.1 8.3e-16 58.3 0.1 1.1 1 0 0 1 1 1 1 ATP cone domain Nre_C PF04895.12 ORF82841 - 0.099 12.6 0.1 0.19 11.7 0.1 1.5 1 1 0 1 1 1 0 Archaeal Nre, C-terminal Flavodoxin_5 PF12724.7 ORF82633 - 7.8e-23 81.3 0.1 1.4e-22 80.5 0.0 1.4 2 0 0 2 2 2 1 Flavodoxin domain DUF3724 PF12521.8 ORF82056 - 0.00081 19.1 16.1 0.33 10.9 0.3 4.8 3 1 1 4 4 4 3 Protein of unknown function (DUF3724) DPM3 PF08285.11 ORF8176 - 0.081 13.1 0.2 0.081 13.1 0.2 1.9 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) EamA PF00892.20 ORF81738 - 0.0014 18.8 11.3 0.0015 18.7 11.3 1.0 1 0 0 1 1 1 1 EamA-like transporter family Ribosomal_S14 PF00253.21 ORF80171 - 1.9e-07 30.7 0.0 1.9e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e PROCN PF08083.11 ORF8001 - 0.13 10.9 0.0 0.14 10.9 0.0 1.0 1 0 0 1 1 1 0 PROCN (NUC071) domain MORN PF02493.20 ORF79702 - 8.3e-18 63.2 13.2 1.4e-05 24.7 2.3 4.9 5 0 0 5 5 5 4 MORN repeat Ribosomal_S14 PF00253.21 ORF78877 - 1.9e-07 30.7 0.0 1.9e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e DUF4328 PF14219.6 ORF76031 - 0.055 13.0 0.0 0.072 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4328) Tubulin_2 PF13809.6 ORF75807 - 0.062 12.5 0.0 0.062 12.5 0.0 1.0 1 0 0 1 1 1 0 Tubulin like DUF3182 PF11379.8 ORF75494 - 0.14 11.1 0.0 0.18 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3182) Sucrose_synth PF00862.19 ORF75153 - 0.04 12.2 1.6 0.051 11.9 1.6 1.1 1 0 0 1 1 1 0 Sucrose synthase Tub_N PF16322.5 ORF75153 - 3.5 8.0 10.9 4.1 7.8 10.9 1.1 1 0 0 1 1 1 0 Tubby N-terminal Actin PF00022.19 ORF74960 - 1.5e-32 112.7 0.1 1.7e-32 112.6 0.1 1.0 1 0 0 1 1 1 1 Actin DIRP PF06584.13 ORF74879 - 0.04 14.1 0.2 0.073 13.3 0.2 1.4 1 0 0 1 1 1 0 DIRP HTH_7 PF02796.15 ORF7485 - 0.13 12.4 0.9 7.8 6.7 0.1 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Ribosomal_L30_N PF08079.12 ORF74810 - 0.012 15.9 5.6 0.024 14.9 5.6 1.6 1 0 0 1 1 1 0 Ribosomal L30 N-terminal domain RabGAP-TBC PF00566.18 ORF74810 - 5 6.7 7.1 8.7 5.9 7.1 1.4 1 1 0 1 1 1 0 Rab-GTPase-TBC domain DUF3330 PF11809.8 ORF74283 - 0.072 13.2 3.2 0.42 10.7 1.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3330) TraG_N PF07916.11 ORF74038 - 0.13 11.0 0.1 0.15 10.9 0.1 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region TMEM95 PF15203.6 ORF73768 - 2.3 7.8 8.7 4.2 7.0 8.7 1.6 1 1 0 1 1 1 0 TMEM95 family Fer4_4 PF12800.7 ORF73607 - 0.25 11.9 7.6 2.1 9.1 0.1 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain DHHC PF01529.20 ORF73480 - 3.9 7.6 6.7 5 7.2 6.7 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase Spc7 PF08317.11 ORF72915 - 0.0003 19.8 5.3 0.00031 19.7 5.3 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein BCAS2 PF05700.11 ORF72915 - 0.0039 16.9 4.6 0.0046 16.7 4.6 1.1 1 0 0 1 1 1 1 Breast carcinoma amplified sequence 2 (BCAS2) Uso1_p115_C PF04871.13 ORF72915 - 0.0097 16.3 6.3 0.014 15.7 6.3 1.2 1 0 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, C terminal region pP_pnuc_1 PF18165.1 ORF72915 - 0.016 15.1 1.5 0.021 14.7 1.5 1.2 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease V-SNARE PF05008.15 ORF72915 - 0.019 15.4 6.7 0.025 15.0 6.7 1.2 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus GBP_C PF02841.14 ORF72915 - 0.054 12.9 6.0 0.058 12.8 6.0 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain TMPIT PF07851.13 ORF72915 - 0.057 12.7 5.5 0.066 12.4 5.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein FAM76 PF16046.5 ORF72915 - 0.068 12.5 11.3 0.076 12.4 11.3 1.0 1 0 0 1 1 1 0 FAM76 protein DUF2183 PF09949.9 ORF72915 - 0.071 13.5 0.9 0.085 13.2 0.9 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2183) Flagellin_N PF00669.20 ORF72915 - 0.15 12.2 1.5 0.2 11.7 1.5 1.3 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region FapA PF03961.13 ORF72915 - 0.28 9.8 7.2 0.31 9.6 7.2 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A XhlA PF10779.9 ORF72915 - 0.32 11.2 9.7 0.061 13.5 3.7 2.1 1 1 1 2 2 2 0 Haemolysin XhlA AAA_11 PF13086.6 ORF72915 - 0.48 10.2 6.7 0.51 10.1 6.7 1.0 1 0 0 1 1 1 0 AAA domain DUF4407 PF14362.6 ORF72915 - 0.69 9.2 3.5 0.74 9.1 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Atg14 PF10186.9 ORF72915 - 1.9 7.5 9.6 2.2 7.3 9.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Mst1_SARAH PF11629.8 ORF72915 - 7.6 6.7 9.5 4.2 7.5 0.5 2.7 3 1 0 3 3 3 0 C terminal SARAH domain of Mst1 MCRS_N PF13325.6 ORF72778 - 0.15 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 N-terminal region of micro-spherule protein Popeye PF04831.13 ORF72695 - 4.4 7.5 8.6 5.2 7.2 8.6 1.3 1 0 0 1 1 1 0 Popeye protein conserved region P120R PF08062.11 ORF72021 - 3.4 8.1 10.2 15 6.1 0.4 3.3 2 1 0 2 2 2 0 P120R (NUC006) repeat Neur_chan_memb PF02932.16 ORF72021 - 8.4 6.4 7.0 9 6.3 7.0 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Sucrose_synth PF00862.19 ORF71870 - 0.04 12.2 1.6 0.051 11.9 1.6 1.1 1 0 0 1 1 1 0 Sucrose synthase Tub_N PF16322.5 ORF71870 - 3.5 8.0 10.9 4.1 7.8 10.9 1.1 1 0 0 1 1 1 0 Tubby N-terminal PorA PF11271.8 ORF71868 - 0.082 12.2 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 Porin PorA BLI1 PF17324.2 ORF71868 - 0.32 11.7 9.2 1.4 9.6 9.2 1.8 1 1 0 1 1 1 0 BLOC-1 interactor 1 ECH_1 PF00378.20 ORF71337 - 0.0044 16.4 0.0 0.0044 16.4 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase SBP_bac_3 PF00497.20 ORF70192 - 1.4e-09 37.7 0.0 1.7e-09 37.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Tap-RNA_bind PF09162.10 ORF68937 - 0.019 14.8 0.3 0.019 14.8 0.3 1.9 2 0 0 2 2 2 0 Tap, RNA-binding DUF3801 PF12687.7 ORF68937 - 0.045 13.8 0.2 0.068 13.2 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3801) Cupin_8 PF13621.6 ORF68450 - 2e-05 24.5 0.1 3.1e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 Cupin-like domain UPF0122 PF04297.14 ORF67969 - 0.017 15.3 1.1 0.025 14.8 1.1 1.2 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like DUF5109 PF17134.4 ORF67969 - 0.082 12.8 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5109) DPM3 PF08285.11 ORF67713 - 1.5e-17 63.6 0.1 1.7e-17 63.4 0.1 1.1 1 0 0 1 1 1 1 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Brr6_like_C_C PF10104.9 ORF67713 - 0.43 10.4 3.4 9.3 6.0 0.1 2.1 1 1 1 2 2 2 0 Di-sulfide bridge nucleocytoplasmic transport domain zf-RING_11 PF17123.5 ORF6767 - 1e-05 25.2 0.7 2e-05 24.3 0.7 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF6767 - 6.3e-05 23.2 0.7 9.6e-05 22.6 0.7 1.3 1 0 0 1 1 1 1 Ring finger domain Baculo_RING PF05883.11 ORF6767 - 0.0078 16.2 0.3 0.012 15.6 0.2 1.4 1 1 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4_2 PF13923.6 ORF6767 - 0.02 14.7 0.6 0.033 14.0 0.6 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF6767 - 0.04 14.0 0.8 0.066 13.2 0.8 1.4 1 0 0 1 1 1 0 RING-type zinc-finger Noelin-1 PF12308.8 ORF6767 - 0.047 13.7 0.8 0.067 13.2 0.8 1.2 1 0 0 1 1 1 0 Neurogenesis glycoprotein zf-C3HC4_3 PF13920.6 ORF6767 - 0.073 12.9 1.0 0.1 12.5 1.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Robl_LC7 PF03259.17 ORF67361 - 1.2e-12 47.4 0.0 1.4e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF4822 PF16103.5 ORF67361 - 0.078 13.3 0.1 0.1 12.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4822) pPIWI_RE_Y PF18156.1 ORF66992 - 0.021 15.2 0.8 0.032 14.7 0.8 1.5 1 1 0 1 1 1 0 pPIWI_RE three-gene island domain Y LEAP-2 PF07359.11 ORF66992 - 0.1 12.4 1.0 0.12 12.2 0.6 1.4 1 1 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) zf-C2H2_11 PF16622.5 ORF66583 - 0.026 14.3 2.6 0.68 9.7 0.2 2.4 2 0 0 2 2 2 0 zinc-finger C2H2-type 3Beta_HSD PF01073.19 ORF66412 - 6.4e-12 45.0 0.0 7.3e-12 44.9 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 ORF66412 - 3.7e-07 29.6 0.1 4.3e-07 29.4 0.1 1.0 1 0 0 1 1 1 1 Male sterility protein Epimerase PF01370.21 ORF66412 - 1.7e-06 27.6 0.0 2e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF66412 - 0.00031 20.7 0.0 0.00036 20.5 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF66412 - 0.0013 18.0 0.2 0.0026 17.0 0.1 1.5 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein DUF3136 PF11334.8 ORF66125 - 0.059 13.2 0.1 0.11 12.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) Herpes_UL6 PF01763.16 ORF64819 - 0.0056 15.3 1.7 0.0062 15.1 1.7 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like Pox_polyA_pol_N PF12630.7 ORF64819 - 0.099 13.0 3.0 0.15 12.4 3.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain DUF5544 PF17698.1 ORF63998 - 0.085 13.0 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5544) IF-2 PF11987.8 ORF63511 - 3.1e-11 43.3 0.0 3.5e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 Translation-initiation factor 2 BRCT_2 PF16589.5 ORF63489 - 0.052 14.0 0.0 0.058 13.8 0.0 1.2 1 0 0 1 1 1 0 BRCT domain, a BRCA1 C-terminus domain MMS22L_N PF14910.6 ORF6347 - 0.087 11.3 0.0 0.098 11.1 0.0 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal DUF4885 PF16226.5 ORF63152 - 0.0059 15.7 0.3 0.0073 15.4 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4885) EF_assoc_1 PF08355.12 ORF62726 - 0.0059 16.2 0.1 0.0063 16.1 0.1 1.3 1 1 0 1 1 1 1 EF hand associated Pkinase PF00069.25 ORF62541 - 0.00071 19.0 0.0 0.00084 18.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain CbiJ PF02571.14 ORF61913 - 0.13 11.7 0.4 0.14 11.6 0.4 1.1 1 0 0 1 1 1 0 Precorrin-6x reductase CbiJ/CobK Glyco_transf_8 PF01501.20 ORF61660 - 0.0019 17.8 0.0 0.0027 17.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 8 Caa3_CtaG PF09678.10 ORF6065 - 0.088 12.3 1.8 0.1 12.0 1.8 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CSD PF00313.22 ORF60426 - 1.5e-05 24.7 0.1 4.5e-05 23.2 0.1 1.7 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain CusF_Ec PF11604.8 ORF60426 - 0.0069 16.3 0.0 0.037 14.0 0.0 2.0 1 1 0 1 1 1 1 Copper binding periplasmic protein CusF Toxin-deaminase PF14424.6 ORF60351 - 0.0032 17.6 0.2 0.005 16.9 0.2 1.3 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases LysR_substrate PF03466.20 ORF60351 - 0.054 12.9 0.0 0.063 12.6 0.0 1.1 1 0 0 1 1 1 0 LysR substrate binding domain DUF5543 PF17697.1 ORF60235 - 0.044 14.1 0.0 0.055 13.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5543) Acyl-CoA_dh_1 PF00441.24 ORF59933 - 4.8e-14 52.8 1.1 5.2e-14 52.7 1.1 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF59933 - 0.072 13.4 0.1 0.089 13.1 0.1 1.3 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain Proteasome PF00227.26 ORF59878 - 0.0011 18.4 0.1 0.0014 18.2 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Nrap_D2 PF17403.2 ORF59120 - 0.027 14.3 0.9 0.029 14.1 0.9 1.1 1 0 0 1 1 1 0 Nrap protein PAP/OAS-like domain Metal_resist PF13801.6 ORF58041 - 0.18 12.0 1.7 0.24 11.6 1.7 1.3 1 0 0 1 1 1 0 Heavy-metal resistance NADH-G_4Fe-4S_3 PF10588.9 ORF57592 - 0.0099 15.4 2.5 0.018 14.6 2.5 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF3446 PF11928.8 ORF56392 - 1.5 9.2 7.8 1.9 8.8 7.6 1.4 1 1 0 1 1 1 0 Early growth response N-terminal domain Mif2_N PF15624.6 ORF56127 - 0.011 16.4 9.2 0.013 16.2 9.2 1.1 1 0 0 1 1 1 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal CTU2 PF10288.9 ORF55258 - 0.035 14.3 0.9 0.039 14.2 0.9 1.2 1 0 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 ComS PF17584.2 ORF5501 - 0.29 10.7 5.1 14 5.3 1.1 3.1 2 1 1 3 3 3 0 Bacillus competence protein S RNA_pol_Rpc4 PF05132.14 ORF54304 - 7.7e-07 29.7 0.2 2.2e-06 28.1 0.0 1.7 2 0 0 2 2 2 1 RNA polymerase III RPC4 VSP PF03302.13 ORF54294 - 0.01 14.7 10.8 0.01 14.7 10.8 1.1 1 0 0 1 1 1 0 Giardia variant-specific surface protein zf_CCCH_4 PF18345.1 ORF54294 - 3.6 7.8 8.9 0.47 10.6 0.7 3.3 4 0 0 4 4 4 0 Zinc finger domain ECSCR PF15820.5 ORF53687 - 0.023 14.5 0.2 0.034 14.0 0.2 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF2371 PF10177.9 ORF53687 - 0.06 13.5 0.4 0.068 13.4 0.4 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) DUF3894 PF13033.6 ORF5269 - 0.043 13.9 1.2 0.065 13.4 0.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3894) DUF1280 PF06918.14 ORF51987 - 0.014 15.0 0.3 0.027 14.1 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1280) DUF1547 PF07577.11 ORF51987 - 0.058 13.8 0.2 0.16 12.4 0.1 1.8 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1547) CRF-BP PF05428.11 ORF51883 - 0.092 11.5 0.0 0.097 11.4 0.0 1.0 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) Ribosomal_S14 PF00253.21 ORF51711 - 1.9e-07 30.7 0.0 1.9e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e Insulin_TMD PF17870.1 ORF5170 - 2.1 8.5 7.6 11 6.1 3.6 2.4 1 1 1 2 2 2 0 Insulin receptor trans-membrane segment NIF PF03031.18 ORF51220 - 6.4e-05 22.8 0.0 6.9e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase HTH_48 PF17906.1 ORF51220 - 0.005 16.9 0.0 0.0082 16.2 0.0 1.4 1 0 0 1 1 1 1 HTH domain in Mos1 transposase PRK PF00485.18 ORF49270 - 0.00018 21.3 0.1 0.00019 21.3 0.1 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Syntaxin PF00804.25 ORF49270 - 0.0042 16.8 6.0 0.0056 16.4 5.7 1.4 1 1 0 1 1 1 1 Syntaxin DUF1759 PF03564.15 ORF49270 - 0.0099 15.8 0.7 0.011 15.7 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) SoDot-IcmSS PF16848.5 ORF49270 - 0.022 14.7 3.3 0.031 14.3 3.3 1.2 1 0 0 1 1 1 0 Substrate of the Dot/Icm secretion system, putative Nup84_Nup100 PF04121.13 ORF49270 - 0.026 12.7 3.8 0.03 12.5 3.8 1.0 1 0 0 1 1 1 0 Nuclear pore protein 84 / 107 Colicin_Pyocin PF01320.18 ORF49270 - 0.026 14.6 3.3 0.047 13.8 3.2 1.5 1 1 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein CotJB PF12652.7 ORF49270 - 0.069 13.4 0.3 0.1 12.8 0.3 1.3 1 0 0 1 1 1 0 CotJB protein Med12-LCEWAV PF12145.8 ORF49270 - 0.12 11.2 2.8 0.12 11.2 2.8 1.0 1 0 0 1 1 1 0 Eukaryotic Mediator 12 subunit domain HAD_SAK_1 PF10307.9 ORF49270 - 0.16 11.8 6.3 0.19 11.5 6.3 1.1 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins NAD_binding_5 PF07994.12 ORF49270 - 0.19 11.1 2.3 0.2 11.0 2.3 1.1 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase DUF948 PF06103.11 ORF49270 - 0.2 12.0 2.5 0.35 11.2 1.9 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Atg14 PF10186.9 ORF49270 - 0.86 8.6 6.2 1 8.4 6.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF49270 - 1.1 9.8 6.2 1.6 9.3 6.2 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region Papilin_u7 PF16626.5 ORF49258 - 0.0029 18.1 0.2 0.0035 17.9 0.2 1.2 1 0 0 1 1 1 1 Linking region between Kunitz_BPTI and I-set on papilin Pkinase PF00069.25 ORF49068 - 3.8e-13 49.4 0.5 4.8e-13 49.1 0.5 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49068 - 7.1e-05 22.2 0.2 9.2e-05 21.8 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase SpvB PF03534.13 ORF49068 - 0.026 13.7 0.1 0.027 13.7 0.1 1.0 1 0 0 1 1 1 0 Salmonella virulence plasmid 65kDa B protein Citrate_ly_lig PF08218.11 ORF49068 - 0.046 13.4 0.0 0.05 13.3 0.0 1.1 1 0 0 1 1 1 0 Citrate lyase ligase C-terminal domain RCC1_2 PF13540.6 ORF48961 - 2.4e-06 27.2 0.2 0.0096 15.7 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF3138 PF11336.8 ORF48818 - 0.074 11.7 0.0 0.078 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) PorA PF11271.8 ORF48676 - 0.082 12.2 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 Porin PorA BLI1 PF17324.2 ORF48676 - 0.32 11.7 9.2 1.4 9.6 9.2 1.8 1 1 0 1 1 1 0 BLOC-1 interactor 1 Sucrose_synth PF00862.19 ORF48674 - 0.04 12.2 1.6 0.051 11.9 1.6 1.1 1 0 0 1 1 1 0 Sucrose synthase Tub_N PF16322.5 ORF48674 - 3.5 8.0 10.9 4.1 7.8 10.9 1.1 1 0 0 1 1 1 0 Tubby N-terminal BC10 PF06726.12 ORF48403 - 0.0016 18.7 0.2 0.0031 17.7 0.2 1.6 1 0 0 1 1 1 1 Bladder cancer-related protein BC10 DUF4187 PF13821.6 ORF48295 - 1.4e-18 66.4 2.2 2.1e-18 65.8 2.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4187) 3Beta_HSD PF01073.19 ORF48177 - 6.4e-12 45.0 0.0 7.3e-12 44.9 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 ORF48177 - 3.7e-07 29.6 0.1 4.3e-07 29.4 0.1 1.0 1 0 0 1 1 1 1 Male sterility protein Epimerase PF01370.21 ORF48177 - 1.7e-06 27.6 0.0 2e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF48177 - 0.00031 20.7 0.0 0.00036 20.5 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF48177 - 0.0013 18.0 0.2 0.0026 17.0 0.1 1.5 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Methuselah_N PF06652.12 ORF47970 - 0.01 15.8 1.2 0.01 15.7 1.2 1.1 1 0 0 1 1 1 0 Methuselah N-terminus Sel1 PF08238.12 ORF47780 - 5.1e-05 23.8 0.0 0.00036 21.1 0.0 2.1 2 0 0 2 2 2 1 Sel1 repeat Trans_reg_C PF00486.28 ORF47780 - 0.0058 16.7 0.0 0.0081 16.2 0.0 1.1 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal ERAP1_C PF11838.8 ORF47780 - 0.063 12.8 0.1 0.066 12.7 0.1 1.1 1 0 0 1 1 1 0 ERAP1-like C-terminal domain Fimbrillin_C PF15495.6 ORF47488 - 0.065 13.7 4.7 0.11 12.9 4.7 1.4 1 1 0 1 1 1 0 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal PheRS_DBD2 PF18554.1 ORF47488 - 0.073 13.1 0.9 0.21 11.6 0.7 1.8 2 0 0 2 2 2 0 PheRS DNA binding domain 2 ABC2_membrane_3 PF12698.7 ORF47488 - 0.71 8.9 6.5 0.72 8.9 6.5 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Bystin PF05291.11 ORF46345 - 0.093 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Bystin EF-hand_1 PF00036.32 ORF45714 - 1.1e-15 55.9 3.0 3.7e-07 29.2 0.2 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF45714 - 1.3e-14 54.3 1.3 1.7e-14 54.0 1.3 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF45714 - 1.2e-12 46.7 1.6 4.7e-06 26.1 0.3 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF45714 - 1.7e-11 43.8 1.5 1.5e-05 24.7 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF45714 - 6.3e-10 38.1 3.1 0.00029 20.2 0.4 2.2 2 0 0 2 2 2 2 EF hand EF-hand_9 PF14658.6 ORF45714 - 2.3e-06 27.8 0.0 3.2e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF45714 - 0.037 14.0 0.3 0.08 12.9 0.3 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand Sigma70_r1_1 PF03979.14 ORF45714 - 0.037 14.1 0.9 0.074 13.1 0.6 1.7 1 1 0 1 1 1 0 Sigma-70 factor, region 1.1 p25-alpha PF05517.12 ORF45714 - 0.041 14.1 0.1 0.047 13.8 0.1 1.3 1 0 0 1 1 1 0 p25-alpha SPARC_Ca_bdg PF10591.9 ORF45714 - 0.053 13.8 0.1 0.07 13.5 0.1 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region PP-binding PF00550.25 ORF45023 - 2.4e-11 43.8 0.0 3e-11 43.5 0.0 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site GPI2 PF06432.11 ORF45015 - 1.9 7.9 10.4 2 7.8 10.4 1.0 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase GRIN_C PF15235.6 ORF44484 - 0.11 12.8 0.4 0.17 12.1 0.4 1.4 1 1 0 1 1 1 0 G protein-regulated inducer of neurite outgrowth C-terminus Robl_LC7 PF03259.17 ORF42701 - 1.2e-12 47.4 0.0 1.4e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF4822 PF16103.5 ORF42701 - 0.078 13.3 0.1 0.1 12.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4822) DUF3845 PF12956.7 ORF42332 - 0.043 13.3 0.0 0.053 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure DUF4710 PF15828.5 ORF41856 - 0.021 14.9 0.8 0.033 14.3 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) Fimbrillin_C PF15495.6 ORF41856 - 0.074 13.5 0.1 0.099 13.1 0.1 1.2 1 0 0 1 1 1 0 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal Thymosin PF01290.20 ORF41164 - 0.06 13.1 1.1 0.06 13.1 1.1 1.7 2 0 0 2 2 2 0 Thymosin beta-4 family MIF PF01187.18 ORF41042 - 0.12 12.7 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Macrophage migration inhibitory factor (MIF) ThiF PF00899.21 ORF40702 - 1e-13 51.2 0.1 8e-11 41.8 0.1 2.0 1 1 1 2 2 2 2 ThiF family Ada3 PF10198.9 ORF40702 - 0.17 12.0 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 CathepsinC_exc PF08773.11 ORF40164 - 0.047 14.0 0.0 0.058 13.7 0.0 1.2 1 0 0 1 1 1 0 Cathepsin C exclusion domain SYF2 PF08231.12 ORF40164 - 0.061 13.7 1.1 0.08 13.3 1.1 1.2 1 0 0 1 1 1 0 SYF2 splicing factor Lenti_VIF_2 PF07401.12 ORF39054 - 0.027 13.8 0.5 0.029 13.7 0.5 1.1 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein TTL PF03133.15 ORF38981 - 9.6e-11 41.3 0.3 9.6e-11 41.3 0.3 1.6 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF38981 - 0.00052 19.3 0.3 0.00097 18.5 0.0 1.6 1 1 0 1 1 1 1 YheC/D like ATP-grasp LAG1-DNAbind PF09271.11 ORF38981 - 0.006 17.2 0.8 0.0065 17.1 0.8 1.1 1 0 0 1 1 1 1 LAG1, DNA binding DUF4215 PF13948.6 ORF38907 - 0.23 11.9 4.0 0.23 11.9 1.8 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4215) APG12 PF04110.13 ORF38887 - 8.2e-15 55.0 0.0 9e-15 54.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Atg8 PF02991.16 ORF38887 - 0.00018 21.7 0.0 0.00019 21.6 0.0 1.1 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like DUF234 PF03008.14 ORF38335 - 0.0051 17.2 1.7 0.0073 16.7 1.7 1.3 1 0 0 1 1 1 1 Archaea bacterial proteins of unknown function FrhB_FdhB_C PF04432.13 ORF38335 - 0.0083 16.0 1.2 0.0095 15.8 1.2 1.2 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus Herpes_UL6 PF01763.16 ORF36796 - 0.0056 15.3 1.7 0.0062 15.1 1.7 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like Pox_polyA_pol_N PF12630.7 ORF36796 - 0.099 13.0 3.0 0.15 12.4 3.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain EamA PF00892.20 ORF36297 - 0.0014 18.8 11.3 0.0015 18.7 11.3 1.0 1 0 0 1 1 1 1 EamA-like transporter family Aldo_ket_red PF00248.21 ORF36230 - 0.0063 15.7 0.0 0.0068 15.6 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family CW_binding_2 PF04122.12 ORF36230 - 0.068 13.8 0.4 0.11 13.2 0.4 1.3 1 1 0 1 1 1 0 Putative cell wall binding repeat 2 DUF2755 PF10954.8 ORF36115 - 9.1e-50 166.7 0.2 1e-49 166.6 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2755) DUF2062 PF09835.9 ORF36115 - 0.016 15.1 1.0 0.016 15.1 1.0 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Ion_trans PF00520.31 ORF36115 - 0.051 12.8 0.4 0.15 11.2 0.1 1.7 2 0 0 2 2 2 0 Ion transport protein LapA_dom PF06305.11 ORF36115 - 0.44 10.4 4.3 0.61 9.9 1.1 2.1 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain HemY_N PF07219.13 ORF36115 - 0.71 10.1 3.8 4.7 7.4 0.0 2.1 1 1 1 2 2 2 0 HemY protein N-terminus TM_helix PF05552.12 ORF36115 - 1.6 8.8 7.8 13 5.9 0.1 2.1 2 0 0 2 2 2 0 Conserved TM helix EF-hand_5 PF13202.6 ORF35836 - 1e-16 59.6 2.7 9e-07 28.1 0.1 3.5 4 0 0 4 4 4 3 EF hand EF-hand_1 PF00036.32 ORF35836 - 5e-15 53.8 0.9 0.00043 19.6 0.0 3.6 2 1 2 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF35836 - 2e-12 46.0 0.3 0.0061 16.4 0.0 3.4 3 1 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF35836 - 4.1e-11 43.2 0.5 1.8e-06 28.3 0.0 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF35836 - 2.5e-08 33.6 0.5 0.31 10.9 0.0 3.7 3 1 1 4 4 4 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF35836 - 0.00011 22.5 0.0 0.012 16.0 0.0 2.1 1 1 1 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF35836 - 0.018 15.2 1.3 0.25 11.6 0.5 2.5 1 1 1 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF35836 - 0.03 14.5 0.0 0.38 11.0 0.0 2.2 2 0 0 2 2 2 0 Pseudomurein-binding repeat Ovate PF04844.13 ORF35836 - 0.15 12.1 0.0 0.31 11.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional repressor, ovate Bacteriocin_II PF01721.18 ORF35349 - 1.3 9.1 3.5 1.2 9.3 0.5 2.1 1 1 1 2 2 2 0 Class II bacteriocin RRM_1 PF00076.22 ORF35175 - 1.3e-06 28.2 0.0 2.8e-06 27.0 0.0 1.6 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF35175 - 0.015 15.4 0.0 0.017 15.2 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif EF-hand_7 PF13499.6 ORF34007 - 3.3e-08 33.9 0.8 5.3e-08 33.2 0.8 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF34007 - 3.8e-05 22.9 0.6 0.013 15.0 0.4 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF34007 - 3.9e-05 23.3 0.5 0.14 12.2 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF34007 - 0.00072 19.3 2.7 0.0043 16.9 2.1 2.3 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_9 PF14658.6 ORF34007 - 0.03 14.6 0.1 0.042 14.2 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain PHD PF00628.29 ORF33906 - 0.012 15.5 0.4 0.11 12.5 0.0 2.3 2 0 0 2 2 2 0 PHD-finger tRNA_deacylase PF04414.12 ORF33906 - 0.18 11.3 0.0 0.22 11.0 0.0 1.1 1 0 0 1 1 1 0 D-aminoacyl-tRNA deacylase SIT PF15330.6 ORF33337 - 0.02 15.4 0.8 0.025 15.0 0.8 1.4 1 1 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT CRT-like PF08627.10 ORF32659 - 9e-06 24.9 0.0 1.1e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like HTH_29 PF13551.6 ORF31860 - 0.17 11.9 1.0 4 7.5 0.1 2.2 2 0 0 2 2 2 0 Winged helix-turn helix HTH_23 PF13384.6 ORF31860 - 0.2 11.5 0.4 4.3 7.2 0.0 2.1 2 0 0 2 2 2 0 Homeodomain-like domain Prefoldin_3 PF13758.6 ORF31620 - 0.00038 20.5 2.6 0.00049 20.1 2.6 1.2 1 0 0 1 1 1 1 Prefoldin subunit Tho2 PF11262.8 ORF31620 - 0.52 9.5 7.5 0.59 9.3 7.5 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DivIC PF04977.15 ORF31620 - 0.72 9.7 7.8 0.96 9.3 4.8 2.0 1 1 1 2 2 2 0 Septum formation initiator DUF4516 PF14990.6 ORF30848 - 0.02 14.6 0.3 0.038 13.7 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) DUF4744 PF15918.5 ORF30237 - 0.095 13.6 1.1 0.22 12.4 1.1 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4744) DUF1773 PF08593.10 ORF30095 - 0.8 10.8 3.5 0.36 11.9 0.9 2.0 2 1 0 2 2 2 0 Domain of unknown function MTA_R1 PF17226.2 ORF29706 - 0.07 13.3 0.7 0.12 12.5 0.7 1.7 1 1 0 1 1 1 0 MTA R1 domain UPF0061 PF02696.14 ORF29706 - 0.15 10.8 0.7 0.17 10.7 0.7 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family GerA PF03323.13 ORF29302 - 0.1 11.0 0.4 0.1 11.1 0.4 1.0 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein Ketoacyl-synt_2 PF13723.6 ORF28564 - 0.055 13.1 0.5 0.065 12.9 0.5 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain DUF1547 PF07577.11 ORF26803 - 0.11 12.9 0.0 0.21 12.0 0.0 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1547) Porphobil_deam PF01379.20 ORF2561 - 0.18 11.3 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain DUF4744 PF15918.5 ORF25076 - 0.095 13.6 1.1 0.22 12.4 1.1 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4744) MORN PF02493.20 ORF24879 - 1.8e-13 49.5 30.4 3.7e-06 26.5 3.0 5.5 5 1 0 5 5 5 4 MORN repeat Tudor_2 PF18104.1 ORF24879 - 9.1 6.1 11.1 24 4.7 0.3 3.7 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain MVL PF12151.8 ORF24522 - 0.027 14.3 0.2 0.082 12.8 0.2 1.9 1 0 0 1 1 1 0 Mannan-binding protein Keratin_B2 PF01500.17 ORF24522 - 0.3 11.0 2.7 0.82 9.6 2.7 1.8 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein DUF5560 PF17715.1 ORF24515 - 0.19 11.2 11.7 0.27 10.7 11.7 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5560) DUF5325 PF17259.2 ORF23605 - 0.24 11.3 3.5 0.48 10.3 3.5 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5325) DUF3446 PF11928.8 ORF23553 - 1.5 9.2 7.8 1.9 8.8 7.6 1.4 1 1 0 1 1 1 0 Early growth response N-terminal domain GASA PF02704.14 ORF22458 - 0.11 12.7 0.7 0.18 12.0 0.7 1.5 1 1 0 1 1 1 0 Gibberellin regulated protein Peptidase_S9 PF00326.21 ORF22406 - 0.0016 18.0 0.0 0.0017 17.9 0.0 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family FSH1 PF03959.13 ORF22406 - 0.024 14.3 0.0 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_5 PF12695.7 ORF22406 - 0.05 13.4 0.0 0.061 13.1 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF22406 - 0.053 12.8 0.0 0.072 12.3 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF22406 - 0.18 11.4 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold POM121 PF15229.6 ORF2190 - 0.052 13.2 7.4 0.064 12.9 7.4 1.1 1 0 0 1 1 1 0 POM121 family DREV PF05219.12 ORF2174 - 0.013 14.7 0.3 0.014 14.5 0.3 1.0 1 0 0 1 1 1 0 DREV methyltransferase Apq12 PF12716.7 ORF2174 - 0.014 15.4 2.4 0.021 14.8 2.4 1.3 1 0 0 1 1 1 0 Nuclear pore assembly and biogenesis DUF3672 PF12421.8 ORF2174 - 0.1 12.5 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Fibronectin type III protein PDR_CDR PF06422.12 ORF2174 - 0.22 11.5 3.4 0.52 10.2 3.4 1.8 1 1 0 1 1 1 0 CDR ABC transporter GIT_CC PF16559.5 ORF21217 - 0.0048 16.7 1.6 0.0069 16.2 1.6 1.3 1 0 0 1 1 1 1 GIT coiled-coil Rho guanine nucleotide exchange factor EURL PF06937.11 ORF21217 - 0.007 15.8 0.9 0.0077 15.7 0.9 1.0 1 0 0 1 1 1 1 EURL protein Adaptin_binding PF10199.9 ORF21217 - 0.062 13.9 3.3 0.073 13.7 3.3 1.1 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 ATG16 PF08614.11 ORF21217 - 0.1 12.8 6.4 0.12 12.5 6.4 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF3450 PF11932.8 ORF21217 - 0.21 10.9 4.6 0.23 10.7 4.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4765 PF15962.5 ORF20857 - 0.23 9.4 0.0 0.23 9.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4765) TAT_signal PF10518.9 ORF20539 - 6.2 6.8 15.3 13 5.8 0.0 3.4 3 0 0 3 3 3 0 TAT (twin-arginine translocation) pathway signal sequence MT PF12777.7 ORF19231 - 0.00021 20.5 0.0 0.00022 20.4 0.0 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor MTA_R1 PF17226.2 ORF18774 - 0.07 13.3 0.7 0.12 12.5 0.7 1.7 1 1 0 1 1 1 0 MTA R1 domain UPF0061 PF02696.14 ORF18774 - 0.15 10.8 0.7 0.17 10.7 0.7 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family Ferlin_C PF16165.5 ORF18184 - 0.13 12.2 3.3 0.14 12.1 3.3 1.2 1 0 0 1 1 1 0 Ferlin C-terminus CSRNP_N PF16019.5 ORF18184 - 0.31 10.9 7.1 0.35 10.8 7.1 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Peptidase_S9 PF00326.21 ORF17650 - 0.0016 18.0 0.0 0.0017 17.9 0.0 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family FSH1 PF03959.13 ORF17650 - 0.024 14.3 0.0 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_5 PF12695.7 ORF17650 - 0.05 13.4 0.0 0.061 13.1 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF17650 - 0.053 12.8 0.0 0.072 12.3 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF17650 - 0.18 11.4 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold PRK PF00485.18 ORF17468 - 0.00031 20.5 0.1 0.00032 20.5 0.1 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Syntaxin PF00804.25 ORF17468 - 0.0028 17.4 6.2 0.0039 16.9 5.1 1.7 1 1 1 2 2 2 2 Syntaxin DUF1759 PF03564.15 ORF17468 - 0.0096 15.9 0.6 0.012 15.5 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) Nup84_Nup100 PF04121.13 ORF17468 - 0.014 13.5 3.1 0.016 13.3 3.1 1.0 1 0 0 1 1 1 0 Nuclear pore protein 84 / 107 Adenine_glyco PF03352.13 ORF17468 - 0.042 13.6 1.9 0.048 13.4 1.9 1.1 1 0 0 1 1 1 0 Methyladenine glycosylase CotJB PF12652.7 ORF17468 - 0.063 13.5 0.4 0.097 12.9 0.4 1.3 1 0 0 1 1 1 0 CotJB protein Colicin_Pyocin PF01320.18 ORF17468 - 0.11 12.7 4.0 0.19 11.8 4.0 1.5 1 1 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein DUF948 PF06103.11 ORF17468 - 0.18 12.1 2.8 0.33 11.2 2.2 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) HAD_SAK_1 PF10307.9 ORF17468 - 0.33 10.7 6.8 0.4 10.5 6.8 1.1 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins Atg14 PF10186.9 ORF17468 - 0.86 8.6 6.2 0.98 8.4 6.2 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF17468 - 0.95 10.0 6.2 1.4 9.4 6.2 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region Kelch_6 PF13964.6 ORF17417 - 0.011 16.0 0.4 0.026 14.8 0.4 1.8 1 1 0 1 1 1 0 Kelch motif Kelch_1 PF01344.25 ORF17417 - 0.046 13.3 0.0 0.07 12.7 0.0 1.5 1 0 0 1 1 1 0 Kelch motif DUF1668 PF07893.13 ORF17308 - 0.0056 16.1 0.0 0.0057 16.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1668) BPD_transp_1 PF00528.22 ORF16753 - 7.3e-06 25.8 1.2 8.1e-06 25.7 1.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CorC_HlyC PF03471.17 ORF16753 - 0.076 13.0 0.0 0.096 12.7 0.0 1.3 1 0 0 1 1 1 0 Transporter associated domain TMEM100 PF16311.5 ORF16753 - 0.11 12.1 0.2 0.2 11.2 0.2 1.7 1 1 0 1 1 1 0 Transmembrane protein 100 Antimicrobial25 PF16839.5 ORF16683 - 0.75 9.9 8.0 0.19 11.8 2.5 2.4 2 1 0 2 2 2 0 Nematode antimicrobial peptide NFACT-R_1 PF05670.13 ORF16582 - 0.068 13.8 0.4 0.094 13.4 0.4 1.2 1 0 0 1 1 1 0 NFACT protein RNA binding domain MORN PF02493.20 ORF15405 - 2.1e-06 27.3 15.8 0.0017 18.1 1.2 3.6 4 0 0 4 4 4 3 MORN repeat DUF3136 PF11334.8 ORF13402 - 0.06 13.1 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) NIF PF03031.18 ORF13383 - 6.4e-05 22.8 0.0 6.9e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase HTH_48 PF17906.1 ORF13383 - 0.005 16.9 0.0 0.0082 16.2 0.0 1.4 1 0 0 1 1 1 1 HTH domain in Mos1 transposase CN_hydrolase PF00795.22 ORF13167 - 1.1e-17 64.3 0.1 1.2e-17 64.1 0.1 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase BtrH_N PF14399.6 ORF13167 - 0.04 14.2 0.0 0.25 11.6 0.0 1.8 2 0 0 2 2 2 0 Butirosin biosynthesis protein H, N-terminal YgbB PF02542.16 ORF12752 - 0.0014 18.9 0.0 0.0015 18.8 0.0 1.0 1 0 0 1 1 1 1 YgbB family DUF2508 PF10704.9 ORF12459 - 0.094 12.9 2.2 0.16 12.1 2.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2508) Haem_bd PF14376.6 ORF12459 - 0.13 12.2 0.7 0.18 11.7 0.1 1.6 2 0 0 2 2 2 0 Haem-binding domain DUF2207 PF09972.9 ORF12459 - 0.15 10.8 1.9 0.17 10.6 1.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Sucrose_synth PF00862.19 ORF12315 - 0.04 12.2 1.6 0.051 11.9 1.6 1.1 1 0 0 1 1 1 0 Sucrose synthase Tub_N PF16322.5 ORF12315 - 3.5 8.0 10.9 4.1 7.8 10.9 1.1 1 0 0 1 1 1 0 Tubby N-terminal PorA PF11271.8 ORF12313 - 0.072 12.4 0.1 0.09 12.1 0.1 1.1 1 0 0 1 1 1 0 Porin PorA BLI1 PF17324.2 ORF12313 - 0.31 11.7 9.2 1.4 9.6 9.2 1.9 1 1 0 1 1 1 0 BLOC-1 interactor 1 Pkinase PF00069.25 ORF12003 - 8.7e-17 61.4 0.3 3.1e-15 56.3 0.3 2.0 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF12003 - 2.6e-07 30.2 0.0 4e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF12003 - 0.0015 18.5 0.0 0.0021 18.0 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF12003 - 0.0024 16.9 0.0 0.0041 16.1 0.0 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF12003 - 0.0028 17.0 0.0 0.0032 16.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF12003 - 0.031 13.3 0.0 0.031 13.3 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Kdo PF06293.14 ORF12003 - 0.062 12.6 0.0 0.32 10.3 0.0 1.8 1 1 1 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pox_ser-thr_kin PF05445.11 ORF12003 - 0.077 11.9 0.2 0.089 11.7 0.2 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase DUF2162 PF09930.9 ORF11879 - 0.013 14.9 6.6 0.016 14.7 6.6 1.2 1 0 0 1 1 1 0 Predicted transporter (DUF2162) E1-E2_ATPase PF00122.20 ORF11879 - 0.027 14.0 1.8 0.031 13.8 1.8 1.1 1 0 0 1 1 1 0 E1-E2 ATPase DUF3671 PF12420.8 ORF11879 - 0.11 12.6 5.9 0.15 12.1 5.9 1.2 1 0 0 1 1 1 0 Protein of unknown function MTABC_N PF16185.5 ORF11879 - 0.14 11.7 3.2 0.15 11.5 3.2 1.1 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region CCSMST1 PF15013.6 ORF11879 - 2.1 8.6 5.0 22 5.3 1.5 2.4 1 1 1 2 2 2 0 CCSMST1 family DHHC PF01529.20 ORF11879 - 5.2 7.2 7.3 6.4 6.9 7.3 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF3787 PF12655.7 ORF11499 - 0.14 12.1 0.1 0.23 11.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3787) SWIRM PF04433.17 ORF112337 - 0.00013 22.2 0.1 0.00018 21.8 0.1 1.1 1 0 0 1 1 1 1 SWIRM domain CRM1_repeat_2 PF18784.1 ORF112337 - 0.0019 17.8 1.8 1.1 8.9 0.1 2.4 2 0 0 2 2 2 2 CRM1 / Exportin repeat 2 NusG_add PF18298.1 ORF112337 - 0.011 15.9 1.1 0.015 15.5 1.1 1.1 1 0 0 1 1 1 0 NusG additional domain GP3 PF03076.14 ORF112336 - 0.025 14.7 0.0 0.03 14.4 0.0 1.2 1 0 0 1 1 1 0 Equine arteritis virus GP3 AAA_lid_3 PF17862.1 ORF111507 - 2.5e-08 33.6 0.0 5e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 AAA+ lid domain AAA PF00004.29 ORF111507 - 4.8e-08 33.5 0.1 1.1e-07 32.4 0.0 1.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) zf-rbx1 PF12678.7 ORF110980 - 9.5e-05 22.6 2.3 0.00019 21.7 2.3 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF110980 - 0.00073 19.8 1.4 0.0012 19.2 1.4 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF110980 - 0.033 14.0 1.4 0.05 13.5 1.4 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF110980 - 0.035 14.0 0.5 0.051 13.4 0.5 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF110980 - 0.044 13.7 0.3 0.078 12.9 0.3 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 CoaE PF01121.20 ORF110980 - 0.057 13.1 0.6 0.094 12.4 0.1 1.5 2 0 0 2 2 2 0 Dephospho-CoA kinase zf-C3HC4 PF00097.25 ORF110980 - 0.06 13.2 0.9 0.12 12.2 0.9 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) FYDLN_acid PF09538.10 ORF110980 - 0.075 13.7 0.7 0.11 13.2 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) Corazonin PF17308.2 ORF110980 - 0.12 12.8 4.1 0.15 12.5 4.1 1.2 1 0 0 1 1 1 0 Pro-corazonin RINGv PF12906.7 ORF110980 - 0.14 12.3 1.7 0.26 11.5 1.7 1.5 1 0 0 1 1 1 0 RING-variant domain FANCL_C PF11793.8 ORF110980 - 0.27 11.4 3.1 16 5.7 3.1 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain DUF2508 PF10704.9 ORF109932 - 0.046 13.9 1.2 0.082 13.1 1.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2508) DUF2207 PF09972.9 ORF109932 - 0.12 11.1 1.5 0.14 10.9 1.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Haem_bd PF14376.6 ORF109932 - 0.15 12.0 0.7 0.18 11.7 0.1 1.5 2 0 0 2 2 2 0 Haem-binding domain 3Beta_HSD PF01073.19 ORF109098 - 6.4e-12 45.0 0.0 7.3e-12 44.9 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 ORF109098 - 3.7e-07 29.6 0.1 4.3e-07 29.4 0.1 1.0 1 0 0 1 1 1 1 Male sterility protein Epimerase PF01370.21 ORF109098 - 1.7e-06 27.6 0.0 2e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF109098 - 0.00031 20.7 0.0 0.00036 20.5 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF109098 - 0.0013 18.0 0.2 0.0026 17.0 0.1 1.5 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Ribosomal_S14 PF00253.21 ORF108847 - 1.9e-07 30.7 0.0 1.9e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e DUF2955 PF11168.8 ORF108578 - 0.018 14.9 0.7 0.025 14.4 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2955) 2TM PF13239.6 ORF108578 - 0.064 13.6 3.6 0.1 12.9 3.6 1.3 1 0 0 1 1 1 0 2TM domain Caveolin PF01146.17 ORF108578 - 0.098 12.6 3.0 0.13 12.3 3.0 1.2 1 0 0 1 1 1 0 Caveolin Acyltransferase PF01553.21 ORF108275 - 8.6e-11 41.6 0.1 1.3e-10 41.0 0.1 1.3 1 0 0 1 1 1 1 Acyltransferase DUF4191 PF13829.6 ORF108275 - 0.087 12.2 0.0 0.092 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF1689 PF07954.11 ORF107643 - 0.041 14.3 0.0 0.062 13.7 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1689) SBF2 PF12335.8 ORF104344 - 0.049 13.2 0.0 0.071 12.7 0.0 1.2 1 0 0 1 1 1 0 Myotubularin protein Coprogen_oxidas PF01218.18 ORF103931 - 0.00025 19.9 0.1 0.00033 19.5 0.1 1.2 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase Viral_RdRp_C PF17501.2 ORF103931 - 0.064 13.7 0.7 0.094 13.2 0.7 1.3 1 0 0 1 1 1 0 Viral RNA-directed RNA polymerase Ank_5 PF13857.6 ORF103890 - 0.00091 19.5 0.3 0.0017 18.6 0.3 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF103890 - 0.00097 19.7 0.0 0.0023 18.5 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF103890 - 0.0036 17.8 0.1 0.015 15.9 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Pex14_N PF04695.13 ORF103884 - 0.32 11.6 4.8 0.41 11.3 4.8 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region BPD_transp_1 PF00528.22 ORF101340 - 7.3e-06 25.8 1.2 8.1e-06 25.7 1.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CorC_HlyC PF03471.17 ORF101340 - 0.076 13.0 0.0 0.096 12.7 0.0 1.3 1 0 0 1 1 1 0 Transporter associated domain TMEM100 PF16311.5 ORF101340 - 0.11 12.1 0.2 0.2 11.2 0.2 1.7 1 1 0 1 1 1 0 Transmembrane protein 100 Pkinase PF00069.25 ORF101305 - 2.4e-08 33.7 0.1 2.8e-08 33.4 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101305 - 2.4e-05 23.8 0.0 2.9e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2251 PF10008.9 ORF101305 - 0.079 13.1 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2251) DUF4355 PF14265.6 ORF100120 - 0.034 14.4 3.0 0.038 14.2 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4355) YlzJ PF14035.6 NODE_56608_length_301_cov_1.406015_g48670_i0reverse_frame_1 - 0.03 14.5 0.0 0.05 13.8 0.0 1.6 1 1 0 1 1 1 0 YlzJ-like protein Taq-exonuc PF09281.10 NODE_56606_length_301_cov_1.443609_g48668_i0forward_frame_1 - 0.084 12.9 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Taq polymerase, exonuclease DnaJ PF00226.31 NODE_56605_length_301_cov_1.458647_g48667_i0reverse_frame_1 - 3.3e-21 75.2 6.7 4.5e-21 74.7 6.7 1.2 1 0 0 1 1 1 1 DnaJ domain NDUF_C2 PF06374.11 NODE_56605_length_301_cov_1.458647_g48667_i0reverse_frame_1 - 0.17 12.0 2.6 0.12 12.5 1.3 1.5 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) LAL_C2 PF18603.1 NODE_56597_length_301_cov_1.759398_g48659_i0forward_frame_1 - 0.0014 18.7 0.2 0.0023 18.1 0.2 1.3 1 0 0 1 1 1 1 L-amino acid ligase C-terminal domain 2 Ribosomal_S5 PF00333.20 NODE_56597_length_301_cov_1.759398_g48659_i0forward_frame_1 - 0.061 13.3 0.2 0.11 12.5 0.2 1.4 1 0 0 1 1 1 0 Ribosomal protein S5, N-terminal domain DUF2663 PF10864.8 NODE_56593_length_301_cov_1.819549_g48655_i0forward_frame_1 - 0.052 13.9 1.5 0.063 13.7 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) GCP_C_terminal PF04130.13 NODE_56581_length_301_cov_2.157895_g48643_i0forward_frame_1 - 3e-18 66.3 3.6 3.5e-18 66.1 3.6 1.0 1 0 0 1 1 1 1 Gamma tubulin complex component C-terminal T4_neck-protein PF11649.8 NODE_56581_length_301_cov_2.157895_g48643_i0forward_frame_1 - 0.025 13.9 0.3 0.026 13.9 0.3 1.1 1 0 0 1 1 1 0 Virus neck protein SWIRM-assoc_1 PF16495.5 NODE_56581_length_301_cov_2.157895_g48643_i0forward_frame_1 - 0.047 13.6 0.7 0.079 12.9 0.7 1.4 1 0 0 1 1 1 0 SWIRM-associated region 1 Recep_L_domain PF01030.24 NODE_56581_length_301_cov_2.157895_g48643_i0forward_frame_1 - 0.079 13.1 2.2 0.089 12.9 2.2 1.1 1 0 0 1 1 1 0 Receptor L domain EF-hand_1 PF00036.32 NODE_56573_length_301_cov_2.469925_g48635_i0reverse_frame_1 - 0.0075 15.8 0.7 0.99 9.1 1.1 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 NODE_56573_length_301_cov_2.469925_g48635_i0reverse_frame_1 - 0.089 12.8 0.4 2.5 8.3 0.5 2.4 2 0 0 2 2 2 0 EF-hand domain DUF1492 PF07374.11 NODE_56572_length_301_cov_2.563910_g48634_i0forward_frame_1 - 0.012 15.8 0.4 0.017 15.3 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1492) Notch PF00066.17 NODE_56572_length_301_cov_2.563910_g48634_i0forward_frame_1 - 0.11 13.0 0.4 0.11 13.0 0.4 2.5 3 0 0 3 3 3 0 LNR domain NEL PF14496.6 NODE_56570_length_301_cov_2.605263_g48632_i0forward_frame_1 - 0.18 11.2 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 C-terminal novel E3 ligase, LRR-interacting Gly_acyl_tr_C PF08444.10 NODE_56560_length_301_cov_3.015038_g48622_i0forward_frame_1 - 0.14 12.4 0.1 0.42 10.9 0.0 1.7 1 1 1 2 2 2 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region PMT PF02366.18 NODE_56559_length_301_cov_3.131579_g48621_i0reverse_frame_1 - 1.5e-09 37.8 0.1 1.7e-09 37.7 0.1 1.0 1 0 0 1 1 1 1 Dolichyl-phosphate-mannose-protein mannosyltransferase mit_SMPDase PF14724.6 NODE_56558_length_301_cov_3.142857_g48620_i0reverse_frame_1 - 0.34 8.8 1.4 0.4 8.6 1.4 1.0 1 0 0 1 1 1 0 Mitochondrial-associated sphingomyelin phosphodiesterase PseudoU_synth_1 PF01416.20 NODE_56558_length_301_cov_3.142857_g48620_i0forward_frame_1 - 0.033 14.7 0.1 0.04 14.4 0.1 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase SHIPPO-rpt PF07004.12 NODE_56557_length_301_cov_3.206767_g48619_i0forward_frame_1 - 0.28 12.2 0.1 0.28 12.2 0.1 3.2 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat Nucleolin_bd PF16725.5 NODE_56549_length_301_cov_6.605263_g48611_i0reverse_frame_1 - 0.015 15.0 2.9 0.025 14.2 1.6 1.9 1 1 1 2 2 2 0 Nucleolin binding domain DUF2587 PF10759.9 NODE_56549_length_301_cov_6.605263_g48611_i0reverse_frame_1 - 0.028 13.9 0.6 0.054 13.0 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2587) YtxH PF12732.7 NODE_56549_length_301_cov_6.605263_g48611_i0reverse_frame_1 - 0.43 11.2 3.1 1.1 9.9 3.1 1.9 1 1 0 1 1 1 0 YtxH-like protein Plasmodium_Vir PF05795.11 NODE_56541_length_301_cov_39.045113_g48603_i0reverse_frame_1 - 0.0077 15.7 0.5 0.0078 15.7 0.5 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MerR PF00376.23 NODE_56528_length_301_cov_61.996241_g48590_i0forward_frame_1 - 0.00054 19.7 0.0 1 9.2 0.0 2.3 2 0 0 2 2 2 2 MerR family regulatory protein DUF2208 PF09973.9 NODE_56518_length_301_cov_81.240602_g48580_i0reverse_frame_1 - 0.053 13.1 1.6 0.065 12.9 1.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) AP3D1 PF06375.11 NODE_56518_length_301_cov_81.240602_g48580_i0forward_frame_1 - 0.037 14.3 3.5 0.036 14.3 3.5 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Dynein_AAA_lid PF17852.1 NODE_56515_length_301_cov_86.590226_g48577_i0reverse_frame_1 - 3.6e-06 27.1 0.1 5.3e-06 26.5 0.1 1.2 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_7 PF12775.7 NODE_56515_length_301_cov_86.590226_g48577_i0reverse_frame_1 - 0.019 14.5 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Use1 PF09753.9 NODE_56515_length_301_cov_86.590226_g48577_i0reverse_frame_1 - 0.049 13.3 0.0 0.053 13.2 0.0 1.0 1 0 0 1 1 1 0 Membrane fusion protein Use1 PROL5-SMR PF15621.6 NODE_56506_length_301_cov_105.071429_g48568_i0reverse_frame_1 - 0.16 12.5 1.8 0.31 11.6 0.1 1.9 2 0 0 2 2 2 0 Proline-rich submaxillary gland androgen-regulated family DUF3240 PF11582.8 NODE_56502_length_301_cov_150.015038_g48564_i0reverse_frame_1 - 0.13 12.4 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3240) DUF2777 PF10949.8 NODE_56470_length_302_cov_1.685393_g48532_i0reverse_frame_1 - 0.093 12.4 1.5 0.12 12.1 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) PH_18 PF18469.1 NODE_56466_length_302_cov_1.872659_g48528_i0forward_frame_1 - 0.014 15.4 0.2 0.016 15.2 0.2 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain CamS PF07537.11 NODE_56466_length_302_cov_1.872659_g48528_i0forward_frame_1 - 0.026 13.7 0.7 0.031 13.4 0.7 1.0 1 0 0 1 1 1 0 CamS sex pheromone cAM373 precursor DUF5473 PF17567.2 NODE_56462_length_302_cov_1.970037_g48524_i0forward_frame_1 - 0.014 15.7 3.7 0.019 15.2 3.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5473) GntP_permease PF02447.16 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 4.4e-37 127.8 4.3 4.7e-37 127.7 4.3 1.0 1 0 0 1 1 1 1 GntP family permease DctM PF06808.12 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 2.4e-07 30.0 2.3 2.9e-07 29.7 2.3 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component CitMHS PF03600.16 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 3.5e-05 23.1 5.6 4.6e-05 22.8 5.6 1.2 1 0 0 1 1 1 1 Citrate transporter Na_H_antiporter PF03553.14 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 3.8e-05 23.1 3.5 4.6e-05 22.8 3.5 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter family DUF1576 PF07613.11 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 0.024 14.1 4.5 0.029 13.9 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1576) Na_H_antiport_2 PF13726.6 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 0.055 13.6 2.7 0.075 13.2 2.7 1.2 1 0 0 1 1 1 0 Na+-H+ antiporter family DUF4064 PF13273.6 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 1.4 9.3 9.3 2.3 8.6 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Ldh_1_N PF00056.23 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 5.1e-15 55.8 0.3 6.7e-15 55.4 0.3 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain HTH_Tnp_4 PF13613.6 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 0.029 14.1 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_Tnp_ISL3 PF13542.6 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 0.035 13.5 0.0 0.062 12.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Sigma70_r4_2 PF08281.12 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 0.045 13.4 0.0 0.074 12.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Sigma70_r4 PF04545.16 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 0.05 13.1 0.0 0.084 12.4 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Cyt_bd_oxida_I PF01654.17 NODE_56454_length_302_cov_2.269663_g48516_i0reverse_frame_1 - 2.4e-28 98.9 0.1 2.6e-28 98.8 0.1 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I FANCA_interact PF15751.5 NODE_56449_length_302_cov_2.602996_g48511_i0reverse_frame_1 - 0.013 15.9 2.4 0.019 15.4 2.4 1.4 1 1 0 1 1 1 0 FAAP20 FANCA interaction domain Oxidored_nitro PF00148.19 NODE_56446_length_302_cov_2.872659_g48508_i0forward_frame_1 - 0.047 12.4 0.0 0.052 12.3 0.0 1.0 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase DUF5533 PF17685.1 NODE_56438_length_302_cov_5.842697_g48500_i0forward_frame_1 - 0.2 12.0 2.7 0.2 12.1 2.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5533) Tweety PF04906.13 NODE_56435_length_302_cov_17.846442_g48497_i0forward_frame_1 - 0.016 13.9 0.3 0.018 13.7 0.3 1.1 1 0 0 1 1 1 0 Tweety RCC1_2 PF13540.6 NODE_56433_length_302_cov_25.382022_g48495_i0reverse_frame_1 - 0.019 14.8 7.9 0.55 10.1 0.4 2.6 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Pept_S41_N PF18294.1 NODE_56419_length_302_cov_53.913858_g48481_i0reverse_frame_1 - 0.2 11.7 2.1 0.3 11.1 2.1 1.6 1 1 0 1 1 1 0 Peptidase S41 N-terminal domain DUF2291 PF10054.9 NODE_56416_length_302_cov_58.367041_g48478_i0forward_frame_1 - 0.044 13.5 0.1 0.051 13.3 0.1 1.2 1 0 0 1 1 1 0 Predicted periplasmic lipoprotein (DUF2291) Drc1-Sld2 PF11719.8 NODE_56415_length_302_cov_60.838951_g48477_i0reverse_frame_1 - 0.11 12.1 19.8 0.13 11.8 19.8 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein Secretin_N_2 PF07655.13 NODE_56415_length_302_cov_60.838951_g48477_i0forward_frame_1 - 2 9.0 17.5 2.4 8.7 17.5 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain DUF3797 PF12677.7 NODE_56413_length_302_cov_63.662921_g48475_i0forward_frame_1 - 0.03 14.2 0.3 0.066 13.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) DUF971 PF06155.12 NODE_56413_length_302_cov_63.662921_g48475_i0forward_frame_1 - 2.8 8.7 6.9 0.44 11.2 0.6 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF971) DUF3958 PF13125.6 NODE_56411_length_302_cov_66.977528_g48473_i0forward_frame_1 - 0.092 13.0 6.1 0.16 12.2 6.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3958) JmjC PF02373.22 NODE_56403_length_302_cov_87.554307_g48465_i0reverse_frame_1 - 3.8e-05 24.1 0.0 5e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_8 PF13621.6 NODE_56403_length_302_cov_87.554307_g48465_i0reverse_frame_1 - 0.0019 18.0 0.0 0.0024 17.6 0.0 1.1 1 0 0 1 1 1 1 Cupin-like domain AAA_17 PF13207.6 NODE_56399_length_302_cov_98.205993_g48461_i0forward_frame_1 - 0.051 14.0 0.1 0.061 13.7 0.1 1.1 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 NODE_56399_length_302_cov_98.205993_g48461_i0forward_frame_1 - 0.067 13.7 0.1 0.09 13.3 0.1 1.1 1 0 0 1 1 1 0 AAA domain ADK PF00406.22 NODE_56399_length_302_cov_98.205993_g48461_i0forward_frame_1 - 0.16 12.1 0.1 0.17 12.0 0.1 1.1 1 0 0 1 1 1 0 Adenylate kinase Fer4_5 PF12801.7 NODE_56398_length_302_cov_99.479401_g48460_i0reverse_frame_1 - 0.11 12.4 1.4 1.6 8.7 1.5 2.1 1 1 1 2 2 2 0 4Fe-4S binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks233.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks233.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks233.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks233.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-RING_10 PF16685.5 NODE_56386_length_302_cov_393.726592_g48448_i0forward_frame_1 - 0.067 13.3 0.2 0.1 12.8 0.2 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 Fer2 PF00111.27 NODE_56384_length_302_cov_6425.018727_g48446_i0reverse_frame_1 - 1.7e-05 24.7 0.1 3.1e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain S-AdoMet_synt_C PF02773.16 NODE_56383_length_302_cov_10022.329588_g48445_i0forward_frame_1 - 4.7e-40 136.8 2.0 5.5e-40 136.6 2.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain YidD PF01809.18 NODE_56378_length_303_cov_1.190299_g48440_i0reverse_frame_1 - 6.5e-25 86.8 2.5 6.5e-25 86.8 2.5 1.4 2 0 0 2 2 2 1 Putative membrane protein insertion efficiency factor Whib PF02467.16 NODE_56378_length_303_cov_1.190299_g48440_i0reverse_frame_1 - 0.099 13.3 0.1 0.23 12.1 0.0 1.5 2 0 0 2 2 2 0 Transcription factor WhiB YWFCY PF14293.6 NODE_56378_length_303_cov_1.190299_g48440_i0reverse_frame_1 - 0.23 11.8 1.2 0.32 11.3 1.2 1.4 1 1 0 1 1 1 0 YWFCY protein CHU_C PF13585.6 NODE_56376_length_303_cov_1.395522_g48438_i0forward_frame_1 - 0.095 12.8 3.9 0.22 11.6 0.2 2.0 1 1 1 2 2 2 0 C-terminal domain of CHU protein family Exotox-A_bind PF09101.10 NODE_56367_length_303_cov_1.619403_g48429_i0forward_frame_1 - 0.046 13.1 0.0 0.049 13.0 0.0 1.1 1 0 0 1 1 1 0 Exotoxin A binding DUF3192 PF11399.8 NODE_56365_length_303_cov_1.705224_g48427_i0forward_frame_1 - 0.089 12.7 0.1 0.1 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3192) DUF2873 PF11395.8 NODE_56352_length_303_cov_2.026119_g48414_i0forward_frame_1 - 0.1 12.5 0.3 0.28 11.0 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) TPR_8 PF13181.6 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.00016 21.6 0.1 0.0003 20.8 0.1 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.0014 18.8 0.0 0.0021 18.3 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.0017 18.1 0.2 0.0027 17.5 0.2 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat BRO1 PF03097.18 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.003 16.4 0.6 0.0037 16.1 0.6 1.0 1 0 0 1 1 1 1 BRO1-like domain TPR_10 PF13374.6 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.0044 16.9 0.0 0.0066 16.3 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.0045 17.0 0.0 0.0072 16.4 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat DUF2682 PF10909.8 NODE_56346_length_303_cov_2.175373_g48408_i0forward_frame_1 - 0.005 17.3 3.8 0.0072 16.8 1.3 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2682) RCC1_2 PF13540.6 NODE_56343_length_303_cov_2.223881_g48405_i0reverse_frame_1 - 9e-06 25.4 0.0 1.4e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_56343_length_303_cov_2.223881_g48405_i0reverse_frame_1 - 0.0029 18.2 0.9 0.98 10.1 0.0 2.3 2 1 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF3927 PF13064.6 NODE_56336_length_303_cov_2.832090_g48398_i0forward_frame_1 - 0.11 12.5 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) UL20 PF17582.2 NODE_56329_length_303_cov_3.645522_g48391_i0forward_frame_1 - 0.23 10.7 3.9 0.26 10.5 3.9 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL20 Lysis_col PF02402.16 NODE_56327_length_303_cov_3.750000_g48389_i0reverse_frame_1 - 0.25 11.1 0.0 0.46 10.2 0.0 1.4 1 0 0 1 1 1 0 Lysis protein zf-C2H2_4 PF13894.6 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 2e-05 25.0 3.6 0.063 14.2 1.0 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.00084 19.0 1.9 0.15 11.9 0.1 2.3 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-met PF12874.7 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.0017 18.7 1.4 0.12 12.8 0.6 2.3 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.0062 16.9 7.8 0.55 10.8 0.1 2.6 3 0 0 3 3 3 2 Zinc finger, C2H2 type Arc_trans_TRASH PF08394.10 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.086 13.2 1.0 2.6 8.4 0.0 2.3 2 0 0 2 2 2 0 Archaeal TRASH domain DZR PF12773.7 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.099 12.7 2.5 0.47 10.5 2.5 1.9 1 1 0 1 1 1 0 Double zinc ribbon zf-HYPF PF07503.12 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.58 10.0 3.3 6.8 6.6 0.1 2.6 3 0 0 3 3 3 0 HypF finger zf-C2H2_6 PF13912.6 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 1.1 9.4 13.7 0.45 10.6 1.4 3.0 2 1 0 2 2 2 0 C2H2-type zinc finger DUF2705 PF10920.8 NODE_56310_length_303_cov_56.145522_g48372_i0forward_frame_1 - 0.068 12.5 8.1 0.077 12.3 8.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2705) MASE4 PF17158.4 NODE_56308_length_303_cov_58.391791_g48370_i0forward_frame_1 - 0.089 12.1 4.8 0.1 11.8 4.8 1.1 1 0 0 1 1 1 0 Membrane-associated sensor, integral membrane domain TRAPP PF04051.16 NODE_56302_length_303_cov_63.940299_g48364_i0reverse_frame_1 - 2.5e-05 24.0 0.2 2.5e-05 24.0 0.2 1.1 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component Lac_bphage_repr PF06543.12 NODE_56290_length_303_cov_80.604478_g48352_i0reverse_frame_1 - 0.037 14.0 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor YbjN PF10722.9 NODE_56290_length_303_cov_80.604478_g48352_i0reverse_frame_1 - 0.1 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative bacterial sensory transduction regulator NADH_4Fe-4S PF10589.9 NODE_56286_length_303_cov_90.376866_g48348_i0forward_frame_1 - 0.07 13.2 0.8 0.19 11.8 0.8 1.8 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region zn-ribbon_14 PF16503.5 NODE_56283_length_303_cov_98.104478_g48345_i0reverse_frame_1 - 0.0093 15.4 2.6 0.023 14.2 0.4 2.7 2 0 0 2 2 2 1 Zinc-ribbon ADAM_CR_2 PF17771.1 NODE_56281_length_303_cov_101.944030_g48343_i0reverse_frame_1 - 0.055 14.0 1.0 0.073 13.6 1.0 1.2 1 0 0 1 1 1 0 ADAM cysteine-rich domain Cytochrom_B559 PF00283.19 NODE_56265_length_303_cov_2481.656716_g48328_i0forward_frame_1 - 1.7e-14 52.9 5.4 3.2e-14 52.0 5.4 1.5 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits PorP_SprF PF11751.8 NODE_56261_length_304_cov_1.096654_g48324_i0reverse_frame_2 - 0.018 14.5 0.2 0.019 14.5 0.2 1.0 1 0 0 1 1 1 0 Type IX secretion system membrane protein PorP/SprF BCLP PF12304.8 NODE_56256_length_304_cov_1.342007_g48319_i0reverse_frame_3 - 0.072 12.6 0.1 0.16 11.5 0.1 1.5 1 1 1 2 2 2 0 Beta-casein like protein zf-C3HC PF07967.13 NODE_56256_length_304_cov_1.342007_g48319_i0reverse_frame_2 - 0.13 12.3 0.7 0.16 12.0 0.7 1.0 1 0 0 1 1 1 0 C3HC zinc finger-like PhnG PF06754.12 NODE_56256_length_304_cov_1.342007_g48319_i0forward_frame_3 - 0.15 12.0 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG CPSase_L_D2 PF02786.17 NODE_56254_length_304_cov_1.386617_g48317_i0forward_frame_2 - 7.8e-39 133.4 0.1 8.4e-39 133.3 0.1 1.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 NODE_56254_length_304_cov_1.386617_g48317_i0forward_frame_2 - 0.00052 19.6 0.0 0.00064 19.3 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 NODE_56254_length_304_cov_1.386617_g48317_i0forward_frame_2 - 0.0073 16.4 0.0 0.0088 16.1 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain cNMP_binding PF00027.29 NODE_56251_length_304_cov_1.475836_g48314_i0forward_frame_2 - 1.1e-05 25.4 0.1 0.00015 21.8 0.0 2.2 2 1 1 3 3 3 1 Cyclic nucleotide-binding domain Endomucin PF07010.12 NODE_56249_length_304_cov_1.486989_g48312_i0reverse_frame_2 - 0.21 11.5 1.3 0.29 11.1 1.3 1.1 1 0 0 1 1 1 0 Endomucin cNMP_binding PF00027.29 NODE_56249_length_304_cov_1.486989_g48312_i0forward_frame_2 - 0.047 13.8 0.0 2.3 8.3 0.0 2.1 1 1 0 1 1 1 0 Cyclic nucleotide-binding domain CRAL_TRIO PF00650.20 NODE_56248_length_304_cov_1.490706_g48311_i0forward_frame_2 - 0.092 12.5 3.8 0.11 12.1 3.8 1.1 1 0 0 1 1 1 0 CRAL/TRIO domain DUF3622 PF12286.8 NODE_56247_length_304_cov_1.557621_g48310_i0forward_frame_3 - 0.11 12.9 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3622) Helitron_like_N PF14214.6 NODE_56247_length_304_cov_1.557621_g48310_i0forward_frame_2 - 0.0014 18.9 0.0 0.0016 18.7 0.0 1.3 1 1 0 1 1 1 1 Helitron helicase-like domain at N-terminus Med31 PF05669.12 NODE_56245_length_304_cov_1.583643_g48308_i0forward_frame_3 - 0.013 15.5 0.7 0.018 15.0 0.3 1.5 2 0 0 2 2 2 0 SOH1 SMODS PF18144.1 NODE_56245_length_304_cov_1.583643_g48308_i0forward_frame_3 - 0.06 13.5 0.5 0.072 13.3 0.5 1.1 1 0 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain Multi_Drug_Res PF00893.19 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 3.1e-29 101.5 7.1 3.5e-29 101.3 7.1 1.0 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 0.0023 18.1 9.8 0.0032 17.6 9.8 1.3 1 1 0 1 1 1 1 EamA-like transporter family UPF0060 PF02694.15 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 0.018 15.2 6.7 0.025 14.8 6.7 1.3 1 1 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family TMEM234 PF10639.9 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 0.038 14.0 0.0 0.042 13.9 0.0 1.3 1 1 0 1 1 1 0 Putative transmembrane family 234 DUF3493 PF11998.8 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 4 7.7 8.3 1.7 8.9 1.8 2.3 1 1 1 2 2 2 0 Low psii accumulation1 / Rep27 FEZ PF07763.13 NODE_56240_length_304_cov_1.684015_g48303_i0forward_frame_2 - 0.044 13.5 0.2 0.051 13.3 0.2 1.1 1 0 0 1 1 1 0 FEZ-like protein aGPT-Pplase1 PF18723.1 NODE_56235_length_304_cov_1.840149_g48298_i0reverse_frame_2 - 0.031 13.7 0.1 0.036 13.5 0.1 1.0 1 0 0 1 1 1 0 alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 1 Lipocalin_2 PF08212.12 NODE_56235_length_304_cov_1.840149_g48298_i0reverse_frame_2 - 0.06 13.3 0.1 0.061 13.3 0.1 1.1 1 0 0 1 1 1 0 Lipocalin-like domain Promethin PF16015.5 NODE_56228_length_304_cov_2.044610_g48291_i0reverse_frame_3 - 0.011 15.6 0.3 0.015 15.2 0.3 1.2 1 0 0 1 1 1 0 Promethin VSG_B PF13206.6 NODE_56227_length_304_cov_2.074349_g48290_i0forward_frame_2 - 0.16 11.2 0.1 0.19 10.9 0.1 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain Adipokin_hormo PF06377.11 NODE_56226_length_304_cov_2.115242_g48289_i0reverse_frame_3 - 0.087 13.2 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Adipokinetic hormone Retrotran_gag_2 PF14223.6 NODE_56226_length_304_cov_2.115242_g48289_i0forward_frame_3 - 0.025 14.3 0.0 0.036 13.7 0.0 1.3 1 1 0 1 1 1 0 gag-polypeptide of LTR copia-type FXa_inhibition PF14670.6 NODE_56224_length_304_cov_2.174721_g48287_i0forward_frame_2 - 0.075 13.3 0.5 0.15 12.4 0.5 1.4 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site Mt_ATP-synt_B PF05405.14 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.011 15.3 10.8 0.059 13.0 2.9 2.0 1 1 1 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Phage_GP20 PF06810.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.02 14.7 11.4 0.2 11.5 11.4 1.9 1 1 0 1 1 1 0 Phage minor structural protein GP20 DUF3583 PF12126.8 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.032 13.7 8.1 0.036 13.5 8.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3583) DUF3584 PF12128.8 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.037 11.5 12.4 0.043 11.4 12.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) L_lactis_ph-MCP PF06673.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.043 12.8 3.6 0.046 12.7 3.6 1.1 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein Baculo_PEP_C PF04513.12 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.053 13.6 2.4 0.089 12.8 1.8 1.6 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Octopine_DH PF02317.17 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.082 13.0 0.9 0.091 12.8 0.9 1.0 1 0 0 1 1 1 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain TMPIT PF07851.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.097 11.9 7.8 0.11 11.8 7.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein Uso1_p115_C PF04871.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.11 12.9 12.0 0.15 12.5 12.0 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region TMF_TATA_bd PF12325.8 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.11 12.7 15.2 0.21 11.8 15.2 1.6 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding UPF0242 PF06785.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.18 11.9 16.3 0.24 11.5 16.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF1512 PF07431.12 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.2 10.7 3.4 0.23 10.4 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1512) DUF4407 PF14362.6 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.21 10.9 7.3 0.25 10.7 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-ZPR1 PF03367.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.24 11.2 2.6 0.31 10.9 2.6 1.2 1 0 0 1 1 1 0 ZPR1 zinc-finger domain NPV_P10 PF05531.12 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.3 11.6 6.1 2 8.9 6.1 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.12 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.4 10.7 6.9 0.62 10.1 6.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) HGD-D PF06050.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.48 10.1 3.2 0.53 10.0 3.2 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component Exonuc_VII_L PF02601.15 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.52 9.8 9.4 0.62 9.6 9.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF948 PF06103.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.7 10.2 4.5 4.8 7.5 0.8 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1640 PF07798.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.87 9.6 11.9 1.1 9.3 11.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DUF883 PF05957.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.87 10.2 7.1 2.2 8.9 6.7 1.8 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Atg14 PF10186.9 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 1.1 8.3 12.2 1.3 8.0 12.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 V_ATPase_I PF01496.19 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 4.5 5.1 7.2 5.3 4.8 7.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Goodbye PF17109.5 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 4.7 7.7 6.8 11 6.5 0.2 2.6 1 1 2 3 3 3 0 fungal STAND N-terminal Goodbye domain YabA PF06156.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 5 7.8 10.2 42 4.9 10.2 2.0 1 1 0 1 1 1 0 Initiation control protein YabA DUF5535 PF17687.1 NODE_56221_length_304_cov_2.282528_g48284_i0reverse_frame_3 - 0.0099 16.0 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5535) DUF4307 PF14155.6 NODE_56221_length_304_cov_2.282528_g48284_i0reverse_frame_2 - 0.027 14.3 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) Herpes_DNAp_acc PF04929.12 NODE_56221_length_304_cov_2.282528_g48284_i0reverse_frame_2 - 0.027 13.4 0.1 0.032 13.2 0.1 1.0 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Sin3_corepress PF08295.12 NODE_56220_length_304_cov_2.312268_g48283_i0forward_frame_3 - 3.1e-20 72.0 0.1 4.1e-20 71.7 0.1 1.1 1 0 0 1 1 1 1 Sin3 family co-repressor DUF1936 PF09151.10 NODE_56213_length_304_cov_2.416357_g48276_i0reverse_frame_2 - 0.073 13.0 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) p47_phox_C PF08944.11 NODE_56209_length_304_cov_2.661710_g48272_i0reverse_frame_2 - 0.095 12.1 1.5 0.095 12.1 1.5 1.7 2 0 0 2 2 2 0 NADPH oxidase subunit p47Phox, C terminal domain Exo_endo_phos PF03372.23 NODE_56209_length_304_cov_2.661710_g48272_i0forward_frame_3 - 0.026 14.0 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family FUSC_2 PF13515.6 NODE_56208_length_304_cov_2.669145_g48271_i0forward_frame_3 - 1.4e-08 34.9 7.1 1.6e-08 34.7 7.1 1.1 1 0 0 1 1 1 1 Fusaric acid resistance protein-like FUSC PF04632.12 NODE_56208_length_304_cov_2.669145_g48271_i0forward_frame_3 - 1.4e-06 27.2 11.0 1.5e-06 27.0 11.0 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family ALMT PF11744.8 NODE_56208_length_304_cov_2.669145_g48271_i0forward_frame_3 - 5.8 5.6 6.7 6.6 5.4 6.7 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter SOCS_box PF07525.16 NODE_56203_length_304_cov_2.996283_g48266_i0forward_frame_3 - 0.026 14.9 2.3 0.38 11.2 0.5 2.4 2 1 0 2 2 2 0 SOCS box DUF591 PF04569.14 NODE_56202_length_304_cov_3.163569_g48265_i0forward_frame_3 - 0.04 14.0 0.2 0.064 13.3 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function cEGF PF12662.7 NODE_56200_length_304_cov_3.245353_g48263_i0forward_frame_2 - 0.011 15.6 0.3 0.02 14.8 0.3 1.4 1 0 0 1 1 1 0 Complement Clr-like EGF-like PX PF00787.24 NODE_56193_length_304_cov_4.412639_g48256_i0forward_frame_3 - 4.4e-05 23.4 0.2 7.7e-05 22.6 0.2 1.5 1 0 0 1 1 1 1 PX domain c-SKI_SMAD_bind PF08782.10 NODE_56193_length_304_cov_4.412639_g48256_i0forward_frame_3 - 0.0039 17.4 0.1 0.0047 17.1 0.1 1.3 1 0 0 1 1 1 1 c-SKI Smad4 binding domain DUF4709 PF15821.5 NODE_56193_length_304_cov_4.412639_g48256_i0forward_frame_3 - 0.0067 16.7 0.8 0.0087 16.3 0.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4709) WND PF07861.11 NODE_56188_length_304_cov_10.297398_g48251_i0forward_frame_2 - 0.03 13.8 0.0 0.035 13.5 0.0 1.0 1 0 0 1 1 1 0 WisP family N-Terminal Region TBK1_CCD1 PF18394.1 NODE_56187_length_304_cov_16.736059_g48250_i0reverse_frame_3 - 0.0016 18.1 1.5 0.0016 18.1 1.5 1.2 1 0 0 1 1 1 1 TANK-binding kinase 1 coiled-coil domain 1 Aa_trans PF01490.18 NODE_56185_length_304_cov_38.791822_g48248_i0reverse_frame_3 - 0.026 13.2 3.9 0.035 12.8 3.9 1.3 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Choline_sulf_C PF12411.8 NODE_56181_length_304_cov_49.728625_g48244_i0forward_frame_3 - 0.011 15.5 0.2 0.02 14.7 0.2 1.4 1 0 0 1 1 1 0 Choline sulfatase enzyme C terminal BST2 PF16716.5 NODE_56177_length_304_cov_61.211896_g48240_i0reverse_frame_3 - 0.09 13.4 0.1 0.13 12.9 0.1 1.1 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Ribosomal_S4Pg PF11993.8 NODE_56177_length_304_cov_61.211896_g48240_i0forward_frame_2 - 0.22 11.6 0.1 5.7 7.0 0.0 2.0 1 1 1 2 2 2 0 Ribosomal S4P (gammaproteobacterial) L31 PF09784.9 NODE_56176_length_304_cov_63.304833_g48239_i0forward_frame_3 - 0.79 10.2 4.4 0.25 11.8 0.8 1.8 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L31 Mut7-C PF01927.16 NODE_56175_length_304_cov_65.297398_g48238_i0reverse_frame_3 - 0.082 13.0 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Mut7-C RNAse domain PrsW-protease PF13367.6 NODE_56175_length_304_cov_65.297398_g48238_i0forward_frame_3 - 0.013 14.9 0.0 0.015 14.8 0.0 1.1 1 0 0 1 1 1 0 PrsW family intramembrane metalloprotease zf-RING_UBOX PF13445.6 NODE_56170_length_304_cov_74.197026_g48233_i0reverse_frame_3 - 0.01 15.8 1.2 0.019 15.0 1.2 1.5 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_2 PF13639.6 NODE_56170_length_304_cov_74.197026_g48233_i0reverse_frame_3 - 0.21 12.0 4.6 0.42 11.0 4.6 1.6 1 1 0 1 1 1 0 Ring finger domain MWFE PF15879.5 NODE_56169_length_304_cov_74.977695_g48232_i0reverse_frame_3 - 0.22 11.7 2.7 0.35 11.1 2.7 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit GerPB PF10803.8 NODE_56167_length_304_cov_79.546468_g48230_i0forward_frame_2 - 0.05 13.7 0.3 0.079 13.1 0.3 1.3 1 0 0 1 1 1 0 Spore germination GerPB AAA_lid_3 PF17862.1 NODE_56166_length_304_cov_80.776952_g48229_i0reverse_frame_2 - 7.7e-14 51.2 0.3 1.4e-13 50.4 0.3 1.4 1 0 0 1 1 1 1 AAA+ lid domain Protamine_P1 PF00260.20 NODE_56164_length_304_cov_85.736059_g48227_i0reverse_frame_3 - 0.3 11.2 7.5 0.49 10.5 7.5 1.3 1 0 0 1 1 1 0 Protamine P1 Inositol_P PF00459.25 NODE_56164_length_304_cov_85.736059_g48227_i0forward_frame_2 - 2.3e-05 24.0 0.0 2.6e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Inositol monophosphatase family SHR-BD PF06650.12 NODE_56163_length_304_cov_87.171004_g48226_i0reverse_frame_3 - 3.3e-08 33.2 0.0 3.3e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 SHR-binding domain of vacuolar-sorting associated protein 13 Carb_bind PF10645.9 NODE_56163_length_304_cov_87.171004_g48226_i0forward_frame_3 - 0.016 15.4 1.2 0.029 14.6 1.2 1.4 1 0 0 1 1 1 0 Carbohydrate binding 5_nucleotid_C PF02872.18 NODE_56160_length_304_cov_92.657993_g48223_i0forward_frame_3 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 5'-nucleotidase, C-terminal domain RCC1_2 PF13540.6 NODE_56159_length_304_cov_93.855019_g48222_i0reverse_frame_3 - 0.019 14.8 5.5 0.024 14.5 0.1 2.6 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat BacteriocIIc_cy PF12173.8 NODE_56159_length_304_cov_93.855019_g48222_i0reverse_frame_3 - 0.29 11.4 2.1 0.29 11.4 0.7 1.6 1 1 1 2 2 2 0 Bacteriocin class IIc cyclic gassericin A-like DUF1870 PF08965.10 NODE_56156_length_304_cov_98.791822_g48219_i0reverse_frame_2 - 0.04 13.9 0.0 0.043 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1870) DUF2967 PF11179.8 NODE_56153_length_304_cov_120.657993_g48216_i0reverse_frame_2 - 0.0018 16.5 0.3 0.0019 16.4 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2967) Serglycin PF04360.12 NODE_56153_length_304_cov_120.657993_g48216_i0reverse_frame_2 - 0.14 12.1 0.6 0.15 12.0 0.6 1.2 1 0 0 1 1 1 0 Serglycin Peptidase_C92 PF05708.12 NODE_56152_length_304_cov_123.594796_g48215_i0forward_frame_2 - 0.065 13.3 0.0 0.078 13.1 0.0 1.2 1 0 0 1 1 1 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ETRAMP PF09716.10 NODE_56146_length_304_cov_151.386617_g48209_i0forward_frame_3 - 0.14 12.2 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) ApoB100_C PF12491.8 NODE_56143_length_304_cov_224.721190_g48206_i0reverse_frame_2 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal CCDC117 PF15810.5 NODE_56142_length_304_cov_241.267658_g48205_i0forward_frame_3 - 0.16 12.3 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 117 Lipase_GDSL PF00657.22 NODE_56138_length_304_cov_349.553903_g48201_i0reverse_frame_2 - 0.14 12.1 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase IMUP PF15761.5 NODE_56137_length_304_cov_375.598513_g48200_i0reverse_frame_3 - 0.064 14.0 3.6 0.079 13.7 3.6 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF5644 PF18712.1 NODE_56136_length_304_cov_403.260223_g48199_i0reverse_frame_3 - 0.0049 16.9 4.5 0.0063 16.5 4.5 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5644) GatD_N PF18195.1 NODE_56135_length_304_cov_963.074349_g42389_i1reverse_frame_2 - 0.2 11.0 0.0 0.32 10.3 0.0 1.3 1 0 0 1 1 1 0 GatD N-terminal domain zf-Tim10_DDP PF02953.15 NODE_56135_length_304_cov_963.074349_g42389_i1forward_frame_3 - 0.027 14.1 1.9 0.061 13.0 1.9 1.6 1 1 1 2 2 2 0 Tim10/DDP family zinc finger GST_N PF02798.20 NODE_56132_length_305_cov_1.122222_g48196_i0forward_frame_2 - 9.9e-06 25.8 0.0 1.4e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 NODE_56132_length_305_cov_1.122222_g48196_i0forward_frame_2 - 4.4e-05 23.8 0.0 6.7e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 NODE_56132_length_305_cov_1.122222_g48196_i0forward_frame_2 - 8.5e-05 22.8 0.0 0.00013 22.2 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 NODE_56132_length_305_cov_1.122222_g48196_i0forward_frame_2 - 0.037 14.8 0.0 0.044 14.5 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain Clathrin_bdg PF15045.6 NODE_56125_length_305_cov_1.366667_g48189_i0forward_frame_2 - 0.096 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Clathrin-binding box of Aftiphilin, vesicle trafficking zf-P11 PF03854.14 NODE_56122_length_305_cov_1.477778_g48186_i0reverse_frame_3 - 0.076 12.7 0.9 0.076 12.7 0.9 2.0 3 1 0 3 3 3 0 P-11 zinc finger Mn_catalase PF05067.12 NODE_56115_length_305_cov_1.711111_g48179_i0reverse_frame_3 - 0.084 11.8 0.0 0.097 11.6 0.0 1.0 1 0 0 1 1 1 0 Manganese containing catalase DUF1451 PF07295.11 NODE_56115_length_305_cov_1.711111_g48179_i0forward_frame_2 - 0.15 12.1 0.0 0.67 10.0 0.2 1.7 2 0 0 2 2 2 0 Zinc-ribbon containing domain DUF1664 PF07889.12 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.012 15.6 1.1 0.016 15.2 1.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) TMF_DNA_bd PF12329.8 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.015 15.3 0.8 0.015 15.3 0.8 1.9 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF2390 PF09523.10 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.018 15.4 0.5 1.1 9.7 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2390) DUF2508 PF10704.9 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.058 13.6 1.6 0.058 13.6 1.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2508) Phage_Mu_Gam PF07352.12 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.49 10.3 7.0 0.13 12.1 1.8 1.9 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein ABC_tran PF00005.27 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 1.7e-07 31.8 0.0 2.9e-07 31.1 0.0 1.5 2 0 0 2 2 1 1 ABC transporter AAA_23 PF13476.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00014 22.5 0.1 0.0002 22.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00032 20.8 0.0 0.00055 20.0 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00035 20.5 0.0 0.00041 20.3 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00045 20.5 0.0 0.00058 20.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00083 19.3 0.0 0.00091 19.2 0.0 1.1 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA PF00004.29 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00088 19.7 0.0 0.0011 19.3 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.0023 17.4 0.0 0.0027 17.2 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SRPRB PF09439.10 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.0025 17.3 0.0 0.0032 16.9 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit NB-ARC PF00931.22 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.0025 17.0 0.0 0.003 16.8 0.0 1.1 1 0 0 1 1 1 1 NB-ARC domain AAA_21 PF13304.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.003 17.4 0.0 0.0037 17.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system TsaE PF02367.17 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.0033 17.4 0.0 0.004 17.2 0.0 1.2 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.006 17.1 0.0 0.008 16.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain Parvo_NS1 PF01057.17 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.009 15.1 0.0 0.011 14.8 0.0 1.1 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 cobW PF02492.19 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.019 14.5 0.0 0.023 14.3 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.02 15.3 0.0 0.023 15.1 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain PduV-EutP PF10662.9 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.021 14.6 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_29 PF13555.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.028 14.2 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_19 PF13245.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.03 14.7 0.0 0.043 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.031 14.2 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 NACHT domain AAA_7 PF12775.7 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.031 13.8 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region GTP_EFTU PF00009.27 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.031 13.8 0.0 0.051 13.1 0.0 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Bac_DnaA PF00308.18 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.032 14.1 0.0 0.04 13.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein RNA_helicase PF00910.22 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.035 14.5 0.0 0.061 13.7 0.0 1.5 2 0 0 2 2 1 0 RNA helicase AAA_28 PF13521.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.038 14.2 0.0 0.045 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain RuvB_N PF05496.12 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.041 13.6 0.0 0.044 13.5 0.0 1.1 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.054 13.5 0.0 0.07 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.054 12.6 0.0 0.057 12.5 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_15 PF13175.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.054 13.2 0.1 0.061 13.0 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain IstB_IS21 PF01695.17 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.063 13.0 0.0 0.063 13.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein NTPase_1 PF03266.15 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.069 13.1 0.1 0.094 12.6 0.1 1.2 1 0 0 1 1 1 0 NTPase Rad17 PF03215.15 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.072 13.0 0.0 0.085 12.8 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_27 PF13514.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.088 12.4 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_PrkA PF08298.11 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.092 11.6 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 PrkA AAA domain Roc PF08477.13 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.099 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.11 12.5 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Dynamin family dNK PF01712.19 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.13 12.0 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 Deoxynucleoside kinase Dicty_CAD PF05720.12 NODE_56108_length_305_cov_1.881481_g48172_i0forward_frame_2 - 0.13 12.3 0.3 0.17 11.9 0.3 1.2 1 0 0 1 1 1 0 Cell-cell adhesion domain RINGv PF12906.7 NODE_56106_length_305_cov_1.885185_g48170_i0reverse_frame_3 - 0.036 14.2 3.8 0.052 13.7 3.8 1.3 1 0 0 1 1 1 0 RING-variant domain Filament PF00038.21 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.023 14.3 13.2 0.026 14.1 13.2 1.0 1 0 0 1 1 1 0 Intermediate filament protein DUF1664 PF07889.12 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.033 14.2 5.1 0.036 14.1 4.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) SlyX PF04102.12 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.033 14.8 2.5 0.033 14.8 2.5 2.0 2 0 0 2 2 2 0 SlyX FlaC_arch PF05377.11 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.074 13.5 3.4 0.11 12.9 1.9 2.0 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) TcpS PF17456.2 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.14 12.2 4.6 0.15 12.1 4.6 1.2 1 0 0 1 1 1 0 Toxin-coregulated pilus protein S Spc7 PF08317.11 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.16 10.9 16.1 0.17 10.7 16.1 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein CENP-H PF05837.12 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.19 12.2 13.1 0.24 11.8 13.1 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Remorin_C PF03763.13 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.21 11.5 14.2 1.2 9.1 14.2 1.9 1 1 0 1 1 1 0 Remorin, C-terminal region PapC_N PF13954.6 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.23 11.5 3.1 0.28 11.2 3.1 1.1 1 0 0 1 1 1 0 PapC N-terminal domain ApoO PF09769.9 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.68 9.9 2.5 0.58 10.1 0.6 1.7 1 1 1 2 2 2 0 Apolipoprotein O ACR_tran PF00873.19 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.79 7.3 4.3 0.84 7.2 4.3 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family Mit_KHE1 PF10173.9 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 1 9.4 6.1 2.1 8.4 6.1 1.7 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related DUF5093 PF17011.5 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 2.1 8.7 8.7 3.7 7.8 3.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5093) ALMT PF11744.8 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 2.1 7.1 7.9 2.4 6.9 7.9 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF4094 PF13334.6 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 3.6 8.1 9.5 0.64 10.5 3.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) DUF2570 PF10828.8 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 3.7 7.4 14.3 3.5e+02 1.0 14.3 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) TMPIT PF07851.13 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 3.7 6.7 9.6 4.4 6.4 9.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein Atg14 PF10186.9 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 4.4 6.3 13.4 4.6 6.2 13.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 HSP70 PF00012.20 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 5.2 5.1 10.6 5.8 5.0 10.6 1.0 1 0 0 1 1 1 0 Hsp70 protein CAP_N PF01213.19 NODE_56095_length_305_cov_2.544444_g48159_i0forward_frame_3 - 0.4 10.1 1.9 0.49 9.8 1.9 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Pkinase PF00069.25 NODE_56091_length_305_cov_2.762963_g48155_i0reverse_frame_2 - 8.3e-05 22.1 0.0 9e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Hrs_helical PF12210.8 NODE_56088_length_305_cov_3.007407_g48152_i0forward_frame_2 - 0.054 14.0 0.1 0.064 13.8 0.1 1.1 1 0 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Kinase-PPPase PF03618.14 NODE_56087_length_305_cov_3.170370_g48151_i0reverse_frame_3 - 1.4e-29 103.7 0.0 1.5e-29 103.6 0.0 1.0 1 0 0 1 1 1 1 Kinase/pyrophosphorylase 2Fe-2S_Ferredox PF11591.8 NODE_56087_length_305_cov_3.170370_g48151_i0forward_frame_2 - 0.0047 16.8 0.1 0.81 9.6 0.0 2.6 2 0 0 2 2 2 2 Ferredoxin chloroplastic transit peptide UFD1 PF03152.14 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_3 - 0.14 11.6 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 YfaZ PF07437.11 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 7.8e-46 156.0 4.3 8.6e-46 155.8 4.3 1.0 1 0 0 1 1 1 1 YfaZ precursor OMP_b-brl PF13505.6 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.00094 19.4 2.9 0.043 13.9 0.1 2.1 1 1 0 2 2 2 2 Outer membrane protein beta-barrel domain LptD PF04453.14 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.0032 16.7 0.2 0.0037 16.6 0.2 1.0 1 0 0 1 1 1 1 LPS transport system D Porin_4 PF13609.6 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.0065 16.3 2.7 0.007 16.1 2.7 1.1 1 0 0 1 1 1 1 Gram-negative porin BBP2_2 PF10082.9 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.017 14.0 0.1 0.12 11.2 0.0 1.9 1 1 1 2 2 2 0 Putative beta-barrel porin 2 Alpha-amyl_C2 PF07821.12 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.017 15.3 0.1 0.027 14.7 0.1 1.2 1 0 0 1 1 1 0 Alpha-amylase C-terminal beta-sheet domain YjbH PF06082.11 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.085 11.7 0.3 0.1 11.4 0.3 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH Aa_trans PF01490.18 NODE_56084_length_305_cov_4.681481_g48148_i0reverse_frame_2 - 0.0034 16.1 4.6 0.0054 15.5 4.6 1.3 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein MWFE PF15879.5 NODE_56084_length_305_cov_4.681481_g48148_i0reverse_frame_2 - 0.6 10.3 2.0 4.3 7.6 1.4 2.1 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase MWFE subunit DUF2768 PF10966.8 NODE_56077_length_305_cov_52.800000_g48141_i0forward_frame_3 - 0.037 14.5 5.3 0.062 13.7 5.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2768) H2O2_YaaD PF03883.14 NODE_56075_length_305_cov_54.870370_g48139_i0forward_frame_2 - 0.0018 17.9 0.0 0.0027 17.3 0.0 1.3 1 0 0 1 1 1 1 Peroxide stress protein YaaA RNA_polI_A34 PF08208.11 NODE_56075_length_305_cov_54.870370_g48139_i0forward_frame_2 - 0.51 10.4 16.7 0.6 10.2 16.7 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 MAP17 PF15807.5 NODE_56075_length_305_cov_54.870370_g48139_i0forward_frame_2 - 8 6.7 7.3 10 6.3 7.3 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DiSB-ORF2_chro PF16506.5 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_3 - 0.17 11.9 0.1 0.64 10.1 0.0 1.9 2 0 0 2 2 2 0 Putative virion glycoprotein of insect viruses CarbpepA_inh PF02977.15 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_2 - 0.27 11.0 8.1 2.5 8.0 1.6 2.6 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor ShK PF01549.24 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_2 - 0.56 10.8 8.7 8.5 7.0 3.5 3.4 3 0 0 3 3 3 0 ShK domain-like DUF4312 PF14189.6 NODE_56072_length_305_cov_58.244444_g48136_i0forward_frame_2 - 0.46 10.5 0.1 0.46 10.5 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4312) DUF4710 PF15828.5 NODE_56069_length_305_cov_61.177778_g48133_i0forward_frame_2 - 8.6 6.6 8.6 4.1 7.6 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4710) Bee_toxin PF17454.2 NODE_56068_length_305_cov_63.029630_g48132_i0reverse_frame_3 - 1.1 9.4 14.0 0.29 11.2 10.1 2.1 2 1 0 2 2 2 0 Honey bee toxin DUF4799 PF16056.5 NODE_56068_length_305_cov_63.029630_g48132_i0forward_frame_3 - 0.031 13.4 0.3 0.033 13.4 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4799) PPR_2 PF13041.6 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 1.4e-12 47.6 0.0 2e-05 24.7 0.0 3.0 1 1 2 3 3 3 3 PPR repeat family PPR PF01535.20 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 2.7e-10 39.8 0.0 0.00051 20.1 0.0 2.9 3 0 0 3 3 3 2 PPR repeat PPR_1 PF12854.7 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 0.00028 20.5 0.0 0.05 13.3 0.0 2.4 2 0 0 2 2 2 2 PPR repeat PPR_long PF17177.4 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 0.004 16.6 0.0 0.0047 16.3 0.0 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 0.007 16.4 0.0 0.066 13.3 0.0 2.0 1 1 0 2 2 2 1 Pentatricopeptide repeat domain Clathrin PF00637.20 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 0.14 12.0 0.0 7.2 6.5 0.0 2.1 1 1 0 2 2 2 0 Region in Clathrin and VPS DUF1152 PF06626.12 NODE_56051_length_305_cov_111.025926_g48115_i0forward_frame_2 - 0.14 11.3 0.0 0.15 11.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1152) Imm17 PF15562.6 NODE_56049_length_305_cov_141.340741_g48113_i0reverse_frame_2 - 0.17 11.8 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 17 Alg14 PF08660.11 NODE_56047_length_305_cov_230.455556_g48111_i0forward_frame_2 - 6.3e-06 26.2 0.0 1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Oligosaccharide biosynthesis protein Alg14 like Diedel PF13164.6 NODE_56045_length_305_cov_242.448148_g48109_i0forward_frame_3 - 0.017 15.6 0.2 0.022 15.2 0.2 1.3 1 0 0 1 1 1 0 Diedel HSA PF07529.13 NODE_56044_length_305_cov_289.577778_g48108_i0reverse_frame_3 - 0.096 13.0 0.7 0.3 11.4 0.7 1.7 1 1 1 2 2 2 0 HSA Fmp27 PF10344.9 NODE_56044_length_305_cov_289.577778_g48108_i0reverse_frame_3 - 0.11 10.6 0.1 0.11 10.6 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial protein from FMP27 NADH_B2 PF14813.6 NODE_56044_length_305_cov_289.577778_g48108_i0forward_frame_3 - 0.18 11.6 0.4 0.33 10.8 0.0 1.6 2 0 0 2 2 2 0 NADH dehydrogenase 1 beta subcomplex subunit 2 Cys_rich_KTR PF14205.6 NODE_56044_length_305_cov_289.577778_g48108_i0forward_frame_2 - 0.02 14.7 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 Cysteine-rich KTR Ycf15 PF10705.9 NODE_56041_length_305_cov_305.562963_g48105_i0reverse_frame_3 - 0.0049 17.0 0.2 0.0068 16.5 0.2 1.2 1 0 0 1 1 1 1 Chloroplast protein precursor Ycf15 putative PMI_typeI PF01238.21 NODE_56041_length_305_cov_305.562963_g48105_i0forward_frame_2 - 0.059 12.6 0.0 0.07 12.3 0.0 1.1 1 0 0 1 1 1 0 Phosphomannose isomerase type I Pertus-S5-tox PF09276.10 NODE_56034_length_306_cov_0.911439_g48098_i0forward_frame_2 - 0.059 13.4 0.0 0.085 12.9 0.0 1.3 1 0 0 1 1 1 0 Pertussis toxin S5 subunit SRR1 PF07985.12 NODE_56033_length_306_cov_0.992620_g48097_i0reverse_frame_3 - 0.11 12.6 0.3 0.21 11.6 0.3 1.5 1 0 0 1 1 1 0 SRR1 DUF4449 PF14613.6 NODE_56032_length_306_cov_1.029520_g48096_i0reverse_frame_3 - 0.27 11.3 0.6 0.32 11.1 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) PLD_C PF12357.8 NODE_56032_length_306_cov_1.029520_g48096_i0forward_frame_2 - 0.093 12.7 0.0 0.29 11.1 0.0 1.7 2 0 0 2 2 2 0 Phospholipase D C terminal REF PF05755.12 NODE_56025_length_306_cov_1.328413_g48089_i0forward_frame_3 - 0.053 13.3 0.0 0.064 13.1 0.0 1.2 1 0 0 1 1 1 0 Rubber elongation factor protein (REF) Phe_ZIP PF08916.11 NODE_56025_length_306_cov_1.328413_g48089_i0forward_frame_3 - 0.062 14.0 0.0 0.11 13.2 0.0 1.4 1 0 0 1 1 1 0 Phenylalanine zipper E1-E2_ATPase PF00122.20 NODE_56022_length_306_cov_1.468635_g48086_i0forward_frame_3 - 0.68 9.4 3.0 0.84 9.1 3.0 1.2 1 0 0 1 1 1 0 E1-E2 ATPase DUF2244 PF10003.9 NODE_56022_length_306_cov_1.468635_g48086_i0forward_frame_3 - 0.97 9.1 3.2 1.1 8.9 3.2 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) DUF2375 PF09558.10 NODE_56021_length_306_cov_1.476015_g48085_i0reverse_frame_3 - 0.081 12.9 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2375) TMEM234 PF10639.9 NODE_56021_length_306_cov_1.476015_g48085_i0reverse_frame_3 - 0.12 12.4 0.8 0.14 12.2 0.8 1.1 1 0 0 1 1 1 0 Putative transmembrane family 234 Glyco_transf_24 PF18404.1 NODE_56021_length_306_cov_1.476015_g48085_i0reverse_frame_2 - 0.042 13.3 0.4 0.05 13.0 0.4 1.0 1 0 0 1 1 1 0 Glucosyltransferase 24 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks234.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks234.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks234.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks234.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ABC_tran PF00005.27 NODE_56019_length_306_cov_1.501845_g48083_i0reverse_frame_2 - 3.3e-05 24.4 0.0 5.4e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_56019_length_306_cov_1.501845_g48083_i0reverse_frame_2 - 0.0086 15.9 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Chordopox_A15 PF05846.12 NODE_56017_length_306_cov_1.619926_g48081_i0reverse_frame_2 - 0.047 13.9 0.0 0.085 13.1 0.0 1.4 1 0 0 1 1 1 0 Chordopoxvirus A15 protein DUF1619 PF07773.11 NODE_56017_length_306_cov_1.619926_g48081_i0forward_frame_2 - 3.8e-06 27.1 0.3 4.9e-06 26.7 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1619) Herpes_UL36 PF03586.13 NODE_56012_length_306_cov_1.830258_g48076_i0forward_frame_2 - 0.057 12.7 0.1 0.068 12.5 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus UL36 tegument protein zf-C3HC4_5 PF17121.5 NODE_56010_length_306_cov_1.885609_g48074_i0reverse_frame_3 - 0.1 12.5 0.5 0.16 11.9 0.5 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) FrhB_FdhB_N PF04422.13 NODE_56005_length_306_cov_2.110701_g48069_i0forward_frame_3 - 0.074 13.2 0.0 10 6.3 0.0 2.1 1 1 1 2 2 2 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term zinc_ribbon_9 PF14369.6 NODE_56005_length_306_cov_2.110701_g48069_i0forward_frame_2 - 0.0065 16.7 1.8 1.7 9.0 0.5 2.4 2 0 0 2 2 2 2 zinc-ribbon TMEM52 PF14979.6 NODE_56004_length_306_cov_2.110701_g48068_i0reverse_frame_3 - 0.012 15.5 4.2 0.017 15.0 4.2 1.2 1 0 0 1 1 1 0 Transmembrane 52 DUF2873 PF11395.8 NODE_56004_length_306_cov_2.110701_g48068_i0reverse_frame_2 - 9.9 6.1 13.7 3.3 7.6 7.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) GpcrRhopsn4 PF10192.9 NODE_56003_length_306_cov_2.129151_g48067_i0forward_frame_3 - 1.5e-14 54.0 3.8 1.7e-14 53.9 3.8 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain HlyD_3 PF13437.6 NODE_56002_length_306_cov_2.166052_g48066_i0forward_frame_2 - 0.036 14.8 0.4 0.047 14.4 0.4 1.3 1 0 0 1 1 1 0 HlyD family secretion protein Zip PF02535.22 NODE_55994_length_306_cov_2.380074_g48058_i0reverse_frame_2 - 0.13 11.5 0.6 0.14 11.4 0.6 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF2207 PF09972.9 NODE_55994_length_306_cov_2.380074_g48058_i0forward_frame_3 - 0.41 9.4 4.8 0.43 9.3 4.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2626 PF11117.8 NODE_55992_length_306_cov_2.457565_g48056_i0reverse_frame_3 - 0.1 13.4 1.7 0.17 12.6 1.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2626) MutS_II PF05188.17 NODE_55992_length_306_cov_2.457565_g48056_i0forward_frame_3 - 0.0075 16.6 0.0 0.009 16.3 0.0 1.1 1 0 0 1 1 1 1 MutS domain II DUF4644 PF15486.6 NODE_55988_length_306_cov_2.549815_g48052_i0forward_frame_2 - 0.071 12.9 0.1 0.086 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4644) Pax7 PF12360.8 NODE_55985_length_306_cov_2.678967_g48049_i0forward_frame_3 - 0.12 12.6 3.3 0.22 11.7 3.3 1.5 1 0 0 1 1 1 0 Paired box protein 7 DUF2057 PF09829.9 NODE_55975_length_306_cov_3.276753_g48039_i0reverse_frame_2 - 2.5e-22 80.0 0.1 2.7e-22 79.9 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2057) TMEM154 PF15102.6 NODE_55973_length_306_cov_3.335793_g48037_i0forward_frame_2 - 0.1 12.5 0.3 0.11 12.4 0.3 1.2 1 0 0 1 1 1 0 TMEM154 protein family DUF3211 PF11485.8 NODE_55970_length_306_cov_3.520295_g48034_i0reverse_frame_2 - 0.047 13.9 0.1 0.052 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3211) Popeye PF04831.13 NODE_55962_length_306_cov_46.966790_g48026_i0forward_frame_3 - 0.61 10.2 7.6 0.75 10.0 7.6 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Kelch_6 PF13964.6 NODE_55960_length_306_cov_49.690037_g48024_i0forward_frame_2 - 0.071 13.4 0.1 0.11 12.8 0.1 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_1 PF01344.25 NODE_55960_length_306_cov_49.690037_g48024_i0forward_frame_2 - 0.14 11.8 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Kelch motif Pkinase PF00069.25 NODE_55958_length_306_cov_53.841328_g48022_i0reverse_frame_2 - 0.003 17.0 0.5 0.0047 16.3 0.5 1.3 1 0 0 1 1 1 1 Protein kinase domain Imm7 PF15585.6 NODE_55958_length_306_cov_53.841328_g48022_i0reverse_frame_2 - 0.064 13.5 0.1 0.16 12.2 0.1 1.7 1 1 0 1 1 1 0 Immunity protein 7 YqfQ PF14181.6 NODE_55956_length_306_cov_55.173432_g48020_i0reverse_frame_2 - 5.9 7.0 10.4 25 5.0 10.4 1.8 1 1 0 1 1 1 0 YqfQ-like protein Mab-21 PF03281.14 NODE_55955_length_306_cov_55.686347_g48019_i0reverse_frame_3 - 0.015 14.6 0.1 0.016 14.5 0.1 1.1 1 0 0 1 1 1 0 Mab-21 protein FYVE PF01363.21 NODE_55955_length_306_cov_55.686347_g48019_i0reverse_frame_2 - 0.034 14.3 0.5 0.044 13.9 0.5 1.3 1 1 0 1 1 1 0 FYVE zinc finger Izumo-Ig PF16706.5 NODE_55954_length_306_cov_58.815498_g48018_i0reverse_frame_3 - 0.15 12.1 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain Drf_FH3 PF06367.16 NODE_55951_length_306_cov_67.767528_g48015_i0forward_frame_3 - 0.094 12.3 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Diaphanous FH3 Domain DUF1964 PF09244.10 NODE_55950_length_306_cov_69.335793_g48014_i0forward_frame_3 - 0.24 11.9 0.0 0.31 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1964) Cyclin_N PF00134.23 NODE_55946_length_306_cov_78.014760_g48010_i0forward_frame_2 - 0.045 13.5 0.1 0.054 13.2 0.1 1.1 1 0 0 1 1 1 0 Cyclin, N-terminal domain TetR_C_1 PF02909.17 NODE_55944_length_306_cov_81.701107_g48008_i0forward_frame_3 - 0.027 14.3 0.1 1.8 8.4 0.2 2.0 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Peptidase_S64 PF08192.11 NODE_55944_length_306_cov_81.701107_g48008_i0forward_frame_3 - 0.034 12.7 4.3 0.035 12.6 4.3 1.0 1 0 0 1 1 1 0 Peptidase family S64 Rod_C PF10493.9 NODE_55944_length_306_cov_81.701107_g48008_i0forward_frame_3 - 0.15 10.4 3.7 0.17 10.2 3.7 1.0 1 0 0 1 1 1 0 Rough deal protein C-terminal region RPA43_OB PF17875.1 NODE_55944_length_306_cov_81.701107_g48008_i0forward_frame_3 - 0.22 12.2 2.7 0.24 12.0 2.7 1.2 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I COA2 PF17051.5 NODE_55935_length_306_cov_119.557196_g47999_i0forward_frame_2 - 0.17 11.9 0.2 0.39 10.8 0.2 1.6 2 0 0 2 2 2 0 Cytochrome C oxidase assembly factor 2 PHD_3 PF13922.6 NODE_55932_length_306_cov_131.409594_g47996_i0forward_frame_2 - 0.057 13.8 2.3 0.063 13.7 1.3 1.7 1 1 1 2 2 2 0 PHD domain of transcriptional enhancer, Asx DUF3297 PF11730.8 NODE_55929_length_306_cov_142.527675_g46748_i1reverse_frame_3 - 0.15 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3297) Rep_1 PF01446.17 NODE_55929_length_306_cov_142.527675_g46748_i1forward_frame_2 - 0.0061 16.1 1.5 0.0072 15.8 1.5 1.1 1 0 0 1 1 1 1 Replication protein Zn_Tnp_IS91 PF14319.6 NODE_55929_length_306_cov_142.527675_g46748_i1forward_frame_2 - 0.025 14.6 2.2 0.031 14.3 1.5 1.6 2 0 0 2 2 2 0 Transposase zinc-binding domain Dsh_C PF12316.8 NODE_55928_length_306_cov_143.793358_g47993_i0forward_frame_2 - 0.2 12.0 1.1 0.25 11.7 1.1 1.1 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Clat_adaptor_s PF01217.20 NODE_55916_length_306_cov_999.785978_g47981_i0reverse_frame_3 - 1.6e-11 44.3 0.3 1.6e-11 44.3 0.3 1.7 2 0 0 2 2 2 1 Clathrin adaptor complex small chain PIN_10 PF18478.1 NODE_55916_length_306_cov_999.785978_g47981_i0reverse_frame_2 - 0.028 14.6 0.1 0.042 14.0 0.1 1.2 1 0 0 1 1 1 0 PIN like domain EBA-175_VI PF11556.8 NODE_55916_length_306_cov_999.785978_g47981_i0reverse_frame_2 - 0.12 12.7 4.8 0.11 12.9 3.3 1.7 1 1 1 2 2 2 0 Erythrocyte binding antigen 175 PhoLip_ATPase_C PF16212.5 NODE_55914_length_306_cov_3048.531365_g47979_i0forward_frame_3 - 0.0057 16.4 0.4 0.0064 16.3 0.4 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal PhoLip_ATPase_C PF16212.5 NODE_55913_length_306_cov_3592.745387_g47978_i0forward_frame_3 - 0.0045 16.8 0.4 0.0051 16.6 0.4 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Adeno_E3_CR2 PF02439.15 NODE_55911_length_306_cov_20615.365314_g47976_i0reverse_frame_2 - 0.56 10.0 5.3 5.1 6.9 1.4 2.3 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 YabA PF06156.13 ORF99588 - 4e-06 27.4 12.3 5.9e-06 26.9 12.3 1.1 1 0 0 1 1 1 1 Initiation control protein YabA Taxilin PF09728.9 ORF99588 - 0.0011 18.2 13.7 0.0014 17.8 13.7 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein TolA_bind_tri PF16331.5 ORF99588 - 0.0021 18.1 10.4 0.0021 18.1 10.4 1.9 1 1 1 2 2 2 1 TolA binding protein trimerisation SOGA PF11365.8 ORF99588 - 0.0075 17.4 14.7 0.0076 17.3 14.1 1.3 1 1 0 1 1 1 1 Protein SOGA KNOX2 PF03791.13 ORF99588 - 0.017 14.6 0.2 0.032 13.7 0.2 1.5 1 0 0 1 1 1 0 KNOX2 domain T3SSipB PF16535.5 ORF99588 - 0.017 15.6 6.3 0.019 15.4 6.3 1.2 1 0 0 1 1 1 0 Type III cell invasion protein SipB RasGAP_C PF03836.15 ORF99588 - 0.026 14.6 6.3 0.029 14.5 6.3 1.1 1 0 0 1 1 1 0 RasGAP C-terminus FapA PF03961.13 ORF99588 - 0.035 12.7 11.7 0.042 12.5 11.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF641 PF04859.12 ORF99588 - 0.047 14.0 3.2 0.047 14.0 3.2 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Herpes_UL6 PF01763.16 ORF99588 - 0.061 11.8 4.4 0.072 11.6 4.4 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like UPF0242 PF06785.11 ORF99588 - 0.075 13.1 18.1 0.091 12.9 18.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus YlqD PF11068.8 ORF99588 - 0.085 13.2 14.6 0.12 12.8 14.6 1.1 1 0 0 1 1 1 0 YlqD protein LRS4 PF10422.9 ORF99588 - 0.094 12.3 9.6 0.1 12.2 9.6 1.1 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 Nup88 PF10168.9 ORF99588 - 0.12 10.1 8.3 0.13 10.0 8.3 1.0 1 0 0 1 1 1 0 Nuclear pore component ZapB PF06005.12 ORF99588 - 0.18 12.2 26.7 1.2 9.6 26.7 1.9 1 1 0 1 1 1 0 Cell division protein ZapB TMPIT PF07851.13 ORF99588 - 0.23 10.7 6.0 0.26 10.5 6.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein Exonuc_VII_L PF02601.15 ORF99588 - 0.27 10.7 5.7 0.28 10.7 5.7 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Cluap1 PF10234.9 ORF99588 - 0.28 10.6 14.5 0.36 10.2 14.5 1.1 1 0 0 1 1 1 0 Clusterin-associated protein-1 DUF3450 PF11932.8 ORF99588 - 0.96 8.7 14.0 1.1 8.5 13.9 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) CENP-H PF05837.12 ORF99588 - 1 9.8 11.5 1.5 9.2 11.5 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Atg14 PF10186.9 ORF99588 - 1.7 7.7 10.8 1.9 7.5 10.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PRKG1_interact PF15898.5 ORF99588 - 1.8 9.5 17.6 0.31 12.0 3.3 1.9 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain FlaC_arch PF05377.11 ORF99588 - 2 8.9 12.6 1.6 9.2 3.8 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) SlyX PF04102.12 ORF99588 - 2.7 8.7 13.6 33 5.2 13.6 2.1 1 1 0 1 1 1 0 SlyX V_ATPase_I PF01496.19 ORF99588 - 2.8 5.7 8.2 2.8 5.8 8.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Mei5 PF10376.9 ORF99588 - 3.2 7.6 17.3 6 6.7 17.3 1.4 1 1 0 1 1 1 0 Double-strand recombination repair protein Fzo_mitofusin PF04799.13 ORF99588 - 3.2 7.3 6.8 4.1 6.9 6.8 1.3 1 0 0 1 1 1 0 fzo-like conserved region 5_nucleotid PF05761.14 ORF99588 - 4 6.2 8.7 4.9 5.9 8.7 1.0 1 0 0 1 1 1 0 5' nucleotidase family DUF4407 PF14362.6 ORF99588 - 7.3 5.9 8.8 9.6 5.5 8.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Ax_dynein_light PF10211.9 ORF99588 - 8.8 6.2 17.8 17 5.3 17.8 1.5 1 1 0 1 1 1 0 Axonemal dynein light chain Tho2 PF11262.8 ORF99588 - 8.8 5.4 10.1 9.9 5.3 10.1 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 SHP PF03579.13 ORF99335 - 0.078 13.0 5.0 0.081 12.9 2.5 2.0 2 0 0 2 2 2 0 Small hydrophobic protein Conotoxin PF02950.17 ORF97776 - 0.15 13.1 0.2 0.19 12.7 0.2 1.2 1 0 0 1 1 1 0 Conotoxin UQ_con PF00179.26 ORF97153 - 1.8e-25 89.2 0.2 2e-25 89.1 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Pneumo_matrix PF03393.16 ORF97123 - 0.049 12.9 0.0 0.049 12.9 0.0 1.2 1 0 0 1 1 1 0 Pneumovirus matrix protein Gag_p24 PF00607.20 ORF97123 - 0.097 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 gag gene protein p24 (core nucleocapsid protein) Regulator_TrmB PF11495.8 ORF96936 - 0.14 11.3 0.1 0.15 11.2 0.1 1.1 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB TPR_6 PF13174.6 ORF96000 - 1.1e-20 72.8 0.3 1.2e-07 31.9 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF96000 - 6.7e-13 49.0 0.1 6.9e-06 26.6 0.0 2.8 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF96000 - 2.8e-10 39.5 0.0 0.00081 19.3 0.2 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat YfiO PF13525.6 ORF96000 - 2e-07 30.9 3.3 5.1e-05 23.1 0.5 2.2 1 1 1 2 2 2 2 Outer membrane lipoprotein TPR_17 PF13431.6 ORF96000 - 1.7e-06 28.0 1.1 0.041 14.3 1.4 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_18 PF13512.6 ORF96000 - 6.2e-06 26.4 4.5 0.14 12.3 0.0 2.9 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF96000 - 6.8e-06 25.9 0.3 0.03 14.5 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF96000 - 4.1e-05 24.1 0.0 0.49 11.4 0.0 2.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_21 PF09976.9 ORF96000 - 0.00018 21.3 0.9 0.037 13.7 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat-like domain TPR_1 PF00515.28 ORF96000 - 0.00064 19.4 0.7 0.42 10.5 0.7 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat DUF4810 PF16068.5 ORF96000 - 0.00078 19.9 0.1 0.69 10.5 0.0 2.5 1 1 2 3 3 3 2 Domain of unknown function (DUF4810) TPR_12 PF13424.6 ORF96000 - 0.0009 19.5 0.0 0.0025 18.0 0.0 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF96000 - 0.002 18.6 0.2 2.3 8.8 0.2 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF96000 - 0.0061 16.8 0.4 0.012 15.8 0.3 1.5 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 ORF96000 - 1.1 9.0 9.0 2.3 7.9 1.3 3.2 3 1 1 4 4 4 0 TPR repeat MORN PF02493.20 ORF95886 - 1.2e-24 84.7 24.7 1e-07 31.4 0.1 5.1 5 0 0 5 5 5 5 MORN repeat Tudor_2 PF18104.1 ORF95886 - 0.0091 15.7 2.0 0.58 9.9 0.1 3.1 3 0 0 3 3 3 2 Jumonji domain-containing protein 2A Tudor domain HSA PF07529.13 ORF95474 - 1.3 9.4 7.5 1.2 9.6 0.5 2.8 2 1 0 2 2 2 0 HSA Sugarporin_N PF11471.8 ORF95365 - 0.063 13.2 1.5 0.094 12.7 1.5 1.3 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension DUF4201 PF13870.6 ORF95361 - 0.0051 16.6 1.9 0.0066 16.2 1.8 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) Thioesterase PF00975.20 ORF94895 - 0.0043 17.2 1.2 0.0076 16.4 1.2 1.6 1 1 0 1 1 1 1 Thioesterase domain Ribosomal_S14 PF00253.21 ORF94622 - 7.5e-27 92.9 1.6 1e-26 92.4 1.6 1.2 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e Paf1 PF03985.13 ORF9380 - 0.022 13.8 2.4 0.024 13.6 2.4 1.0 1 0 0 1 1 1 0 Paf1 ydhR PF08803.11 ORF93719 - 1.1e-41 140.6 0.0 1.2e-41 140.5 0.0 1.0 1 0 0 1 1 1 1 Putative mono-oxygenase ydhR Ctf8 PF09696.10 ORF92918 - 0.035 14.4 0.3 0.23 11.8 0.3 2.3 1 1 0 1 1 1 0 Ctf8 Staphostatin_A PF09022.10 ORF92918 - 0.1 12.5 0.1 0.14 12.1 0.1 1.3 1 1 0 1 1 1 0 Staphostatin A NOP5NT PF08156.13 ORF92590 - 0.016 15.6 0.0 0.016 15.6 0.0 2.2 3 1 0 3 3 3 0 NOP5NT (NUC127) domain ORF11CD3 PF10549.9 ORF91884 - 0.19 11.9 0.2 0.32 11.1 0.2 1.4 1 1 0 1 1 1 0 ORF11CD3 domain DUF883 PF05957.13 ORF91245 - 1.4e-29 102.5 1.5 1.6e-29 102.4 1.5 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) YtxH PF12732.7 ORF91245 - 0.0017 18.9 10.9 0.078 13.5 1.1 2.7 2 1 1 3 3 3 2 YtxH-like protein ApoLp-III PF07464.11 ORF91245 - 0.015 15.4 0.5 0.037 14.1 0.5 1.6 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Spore_III_AB PF09548.10 ORF91245 - 0.015 15.4 1.1 0.044 13.9 0.4 1.8 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) Apolipoprotein PF01442.18 ORF91245 - 0.024 14.5 5.2 0.028 14.3 5.2 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Remorin_C PF03763.13 ORF91245 - 0.032 14.1 4.5 0.039 13.8 4.5 1.2 1 0 0 1 1 1 0 Remorin, C-terminal region Ribosomal_L36e PF01158.18 ORF91245 - 0.033 14.4 1.0 0.04 14.1 1.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L36e DUF4404 PF14357.6 ORF91245 - 0.054 14.1 2.7 0.083 13.5 2.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) DotU PF09850.9 ORF91245 - 0.11 12.2 0.1 0.27 10.9 0.1 1.3 1 1 0 1 1 1 0 Type VI secretion system protein DotU K-box PF01486.17 ORF91245 - 0.12 12.5 3.7 2.5 8.3 3.7 2.1 1 1 0 1 1 1 0 K-box region PLAC9 PF15205.6 ORF91245 - 0.13 12.7 0.2 0.22 11.9 0.2 1.3 1 0 0 1 1 1 0 Placenta-specific protein 9 DUF543 PF04418.12 ORF91245 - 0.18 11.8 1.8 0.42 10.6 1.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF543) DUF1451 PF07295.11 ORF91245 - 0.31 11.1 2.4 0.34 10.9 2.4 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Ribosomal_L35p PF01632.19 ORF91183 - 0.052 14.1 1.3 0.075 13.6 0.1 1.8 2 0 0 2 2 2 0 Ribosomal protein L35 CENP-T_N PF16171.5 ORF90714 - 0.015 14.3 2.0 0.016 14.1 2.0 1.0 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T N-terminus TP53IP5 PF15331.6 ORF90714 - 2 8.5 6.8 2.2 8.4 6.8 1.0 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 RCC1_2 PF13540.6 ORF90617 - 1.3e-05 24.9 1.3 0.077 12.8 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 ORF90617 - 2.2 8.4 8.6 7.2 6.7 1.1 2.9 3 0 0 3 3 3 0 PheRS DNA binding domain 2 cpYpsA PF12694.7 ORF90220 - 4.8e-15 55.6 0.0 5.3e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 Circularly permutated YpsA SLOG family p450 PF00067.22 ORF89744 - 1.7e-09 37.0 0.0 2.1e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Ribosomal_L44 PF00935.19 ORF89615 - 4.1e-27 94.5 12.6 4.1e-27 94.5 12.6 1.7 1 1 1 2 2 2 1 Ribosomal protein L44 YyzF PF14116.6 ORF89615 - 0.084 12.9 0.3 0.18 11.9 0.3 1.5 1 0 0 1 1 1 0 YyzF-like protein AC_N PF16214.5 ORF891 - 4 6.5 6.7 4.8 6.2 6.7 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF848 PF05852.11 ORF888 - 0.0054 16.9 0.2 0.0084 16.2 0.2 1.3 1 0 0 1 1 1 1 Gammaherpesvirus protein of unknown function (DUF848) bZIP_1 PF00170.21 ORF888 - 0.014 15.4 1.7 0.12 12.5 0.2 2.2 2 0 0 2 2 2 0 bZIP transcription factor Cnn_1N PF07989.11 ORF888 - 0.056 13.6 4.7 0.35 11.1 4.4 2.1 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF2312 PF10073.9 ORF888 - 0.16 11.6 2.5 0.39 10.4 1.4 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) TSC22 PF01166.18 ORF888 - 3.1 8.2 5.8 11 6.4 1.6 2.7 2 1 1 3 3 3 0 TSC-22/dip/bun family MFS_2 PF13347.6 ORF88549 - 0.0048 15.5 2.2 0.0067 15.0 2.2 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 ORF88549 - 0.04 12.9 3.3 0.031 13.2 0.8 1.7 1 1 1 2 2 2 0 Major Facilitator Superfamily ApoLp-III PF07464.11 ORF88193 - 0.00013 22.0 0.6 0.00016 21.8 0.6 1.3 1 1 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) FAM184 PF15665.5 ORF88193 - 0.00015 21.6 1.7 0.00015 21.6 1.7 1.1 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B CHIP_TPR_N PF18391.1 ORF88193 - 0.0027 18.4 2.4 0.0031 18.2 0.9 1.7 1 1 0 1 1 1 1 CHIP N-terminal tetratricopeptide repeat domain DUF2312 PF10073.9 ORF88193 - 0.0051 16.4 1.6 0.0093 15.6 1.6 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2312) FANCI_S3 PF14677.6 ORF88193 - 0.0083 15.9 1.6 0.0098 15.6 1.6 1.2 1 0 0 1 1 1 1 FANCI solenoid 3 4HB_MCP_1 PF12729.7 ORF88193 - 0.0089 15.6 4.2 0.0089 15.6 4.2 1.5 1 1 0 1 1 1 1 Four helix bundle sensory module for signal transduction GerPC PF10737.9 ORF88193 - 0.014 15.5 5.0 0.015 15.4 0.7 2.0 1 1 1 2 2 2 0 Spore germination protein GerPC EST1 PF10374.9 ORF88193 - 0.016 15.9 1.8 2.7 8.6 0.1 2.4 1 1 1 2 2 2 0 Telomerase activating protein Est1 Rif1_N PF12231.8 ORF88193 - 0.017 14.2 0.5 0.019 14.0 0.5 1.0 1 0 0 1 1 1 0 Rap1-interacting factor 1 N terminal DUF3144 PF11342.8 ORF88193 - 0.1 12.9 4.8 0.42 10.9 0.4 2.8 1 1 0 3 3 3 0 Protein of unknown function (DUF3144) MFS_2 PF13347.6 ORF87600 - 0.0048 15.5 2.2 0.0067 15.0 2.2 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 ORF87600 - 0.04 12.9 3.3 0.031 13.2 0.8 1.7 1 1 1 2 2 2 0 Major Facilitator Superfamily Methyltransf_31 PF13847.6 ORF87138 - 0.045 13.5 0.1 0.056 13.2 0.1 1.3 1 1 0 1 1 1 0 Methyltransferase domain Phostensin_N PF13916.6 ORF85508 - 0.11 12.9 0.3 0.24 11.8 0.3 1.7 1 1 0 1 1 1 0 PP1-regulatory protein, Phostensin N-terminal MukB PF04310.12 ORF85455 - 0.033 14.0 0.1 0.034 14.0 0.1 1.0 1 0 0 1 1 1 0 MukB N-terminal Cys_rich_CWC PF14375.6 ORF84952 - 0.023 15.1 0.2 0.037 14.4 0.2 1.4 1 0 0 1 1 1 0 Cysteine-rich CWC MEF2_binding PF09047.10 ORF84952 - 0.076 12.9 0.2 4 7.4 0.1 2.4 2 0 0 2 2 2 0 MEF2 binding DHHC PF01529.20 ORF84626 - 0.14 12.3 10.1 0.18 11.9 10.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF883 PF05957.13 ORF84364 - 1.2e-28 99.5 0.3 1.3e-28 99.4 0.3 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) YtxH PF12732.7 ORF84364 - 0.012 16.1 10.2 0.072 13.6 1.5 2.4 2 1 0 2 2 2 0 YtxH-like protein DUF4449 PF14613.6 ORF84364 - 0.016 15.3 0.3 0.019 15.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) Apolipoprotein PF01442.18 ORF84364 - 0.028 14.3 0.2 0.033 14.1 0.2 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain ATP-synt_DE PF00401.20 ORF84364 - 0.051 13.9 3.4 0.075 13.3 2.5 1.6 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DUF512 PF04459.12 ORF84364 - 0.077 12.3 0.0 0.084 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF512) SbcD_C PF12320.8 ORF84364 - 0.081 13.2 0.2 0.1 12.9 0.2 1.1 1 0 0 1 1 1 0 Type 5 capsule protein repressor C-terminal domain Gal_mutarotas_3 PF18080.1 ORF84364 - 0.11 12.4 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Galactose mutarotase-like fold domain Sugar_tr PF00083.24 ORF84319 - 5.6e-08 32.1 0.0 5.6e-08 32.1 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2207 PF09972.9 ORF84319 - 0.078 11.7 0.1 0.08 11.7 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF979 PF06166.12 ORF84319 - 0.078 12.1 0.0 0.087 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF979) S_4TM PF18159.1 ORF84319 - 0.081 12.2 0.0 0.087 12.1 0.0 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain cpYpsA PF12694.7 ORF82588 - 4.8e-15 55.6 0.0 5.3e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 Circularly permutated YpsA SLOG family MbeD_MobD PF04899.12 ORF82276 - 0.11 12.6 1.4 2.4 8.4 0.0 2.4 2 1 0 3 3 3 0 MbeD/MobD like Nup54 PF13874.6 ORF82276 - 0.22 11.6 0.2 1.2 9.2 0.2 1.8 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 CobW_C PF07683.14 ORF80981 - 1e-13 51.0 0.1 1.2e-13 50.8 0.1 1.0 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain NFACT-R_1 PF05670.13 ORF80554 - 0.07 13.8 0.6 0.091 13.4 0.6 1.2 1 0 0 1 1 1 0 NFACT protein RNA binding domain MORN PF02493.20 ORF80492 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF80492 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF80492 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Ion_trans PF00520.31 ORF79878 - 7.3e-14 51.6 0.6 8.1e-14 51.4 0.6 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF79878 - 0.018 13.7 0.1 0.02 13.6 0.1 1.1 1 0 0 1 1 1 0 Polycystin cation channel Metallothio_11 PF02066.15 ORF79700 - 0.16 12.1 0.6 0.16 12.1 0.6 2.1 2 0 0 2 2 2 0 Metallothionein family 11 E3_binding PF02817.17 ORF79153 - 0.18 12.2 0.0 0.32 11.4 0.0 1.4 1 0 0 1 1 1 0 e3 binding domain BNR_6 PF15899.5 ORF78535 - 0.1 12.7 0.1 0.3 11.3 0.1 1.8 1 0 0 1 1 1 0 BNR-Asp box repeat Turandot PF07240.11 ORF7849 - 0.011 15.7 0.3 0.24 11.4 0.0 2.3 2 1 0 2 2 2 0 Stress-inducible humoral factor Turandot IDO PF01231.18 ORF7849 - 0.02 13.7 0.3 0.024 13.4 0.3 1.0 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase REV PF00424.18 ORF78215 - 0.41 10.7 3.7 0.72 9.9 3.7 1.5 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) START PF01852.19 ORF78118 - 5e-05 22.8 0.0 6.8e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 START domain Ax_dynein_light PF10211.9 ORF77959 - 8.2e-21 74.8 12.8 9.1e-21 74.6 12.8 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain Mei5 PF10376.9 ORF77959 - 0.00047 20.1 8.3 0.00049 20.0 8.3 1.0 1 0 0 1 1 1 1 Double-strand recombination repair protein ERM PF00769.19 ORF77959 - 0.0018 18.1 8.8 0.0019 18.0 8.8 1.0 1 0 0 1 1 1 1 Ezrin/radixin/moesin family APG6_N PF17675.1 ORF77959 - 0.0027 18.2 12.8 0.0032 18.0 12.8 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region Phage_TAC_4 PF08748.11 ORF77959 - 0.003 17.9 3.7 0.004 17.5 3.7 1.1 1 0 0 1 1 1 1 Phage tail assembly chaperone DUF724 PF05266.14 ORF77959 - 0.013 15.4 6.9 0.014 15.2 6.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Jnk-SapK_ap_N PF09744.9 ORF77959 - 0.013 15.7 8.9 0.017 15.3 8.9 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Leu_zip PF15294.6 ORF77959 - 0.014 15.0 9.6 0.017 14.7 9.6 1.0 1 0 0 1 1 1 0 Leucine zipper bZIP_1 PF00170.21 ORF77959 - 0.02 15.0 6.7 0.02 15.0 6.7 1.6 2 0 0 2 2 2 0 bZIP transcription factor UPF0242 PF06785.11 ORF77959 - 0.062 13.4 11.9 0.068 13.3 11.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF737 PF05300.11 ORF77959 - 0.068 13.5 7.4 0.079 13.3 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Mod_r PF07200.13 ORF77959 - 0.069 13.2 10.1 0.081 13.0 10.1 1.2 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Herpes_UL14 PF03580.14 ORF77959 - 0.074 13.3 4.9 0.082 13.1 4.9 1.1 1 0 0 1 1 1 0 Herpesvirus UL14-like protein Peptidase_S49_N PF08496.10 ORF77959 - 0.081 13.0 3.9 0.083 12.9 3.9 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Collectrin PF16959.5 ORF77959 - 0.096 12.5 0.3 0.12 12.1 0.3 1.3 1 1 0 1 1 1 0 Renal amino acid transporter LUC7 PF03194.15 ORF77959 - 0.12 12.0 6.4 0.14 11.8 6.4 1.1 1 0 0 1 1 1 0 LUC7 N_terminus YabA PF06156.13 ORF77959 - 0.18 12.5 10.1 0.24 12.0 10.1 1.4 1 1 0 1 1 1 0 Initiation control protein YabA Med8 PF10232.9 ORF77959 - 0.21 11.2 6.4 0.24 11.0 6.4 1.1 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 DivIC PF04977.15 ORF77959 - 0.35 10.7 13.3 0.041 13.7 6.6 2.3 1 1 1 2 2 2 0 Septum formation initiator CENP-H PF05837.12 ORF77959 - 0.35 11.3 10.6 0.47 10.9 10.6 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) OmpH PF03938.14 ORF77959 - 0.42 11.0 10.8 0.5 10.7 10.8 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TolA_bind_tri PF16331.5 ORF77959 - 0.5 10.5 12.2 0.068 13.3 3.7 2.2 1 1 1 2 2 2 0 TolA binding protein trimerisation Troponin PF00992.20 ORF77959 - 0.62 10.4 12.9 0.28 11.5 7.9 1.9 1 1 1 2 2 2 0 Troponin DUF3450 PF11932.8 ORF77959 - 0.81 8.9 11.6 2.2 7.6 11.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FAM76 PF16046.5 ORF77959 - 1.5 8.1 5.9 1.7 7.9 5.9 1.0 1 0 0 1 1 1 0 FAM76 protein FlaC_arch PF05377.11 ORF77959 - 1.5 9.2 6.6 0.56 10.6 3.0 1.9 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) ZapB PF06005.12 ORF77959 - 1.7 9.2 16.8 10 6.6 16.9 2.1 1 1 0 1 1 1 0 Cell division protein ZapB TMPIT PF07851.13 ORF77959 - 2.1 7.5 7.0 2.5 7.2 7.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF16 PF01519.16 ORF77959 - 3.4 8.2 10.1 8.3 7.0 10.1 1.7 1 1 0 1 1 1 0 Protein of unknown function DUF16 SlyX PF04102.12 ORF77959 - 4.9 7.9 12.2 1.8 9.3 7.3 2.1 1 1 1 2 2 2 0 SlyX bZIP_2 PF07716.15 ORF77959 - 5 7.3 13.1 0.084 13.0 2.9 2.5 1 1 2 3 3 3 0 Basic region leucine zipper XhlA PF10779.9 ORF77959 - 5.5 7.3 9.9 2.5 8.4 5.0 2.4 1 1 2 3 3 3 0 Haemolysin XhlA Mto2_bdg PF12808.7 ORF77959 - 8.3 6.8 11.0 1.1 9.6 4.7 2.5 1 1 1 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region AAA_26 PF13500.6 ORF77547 - 0.00013 21.8 0.0 0.00015 21.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_31 PF13614.6 ORF77547 - 0.0012 18.8 0.0 0.0018 18.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain Synaptonemal_3 PF15191.6 ORF77547 - 0.092 12.5 0.0 12 5.7 0.0 2.1 2 0 0 2 2 2 0 Synaptonemal complex central element protein 3 ArsA_ATPase PF02374.15 ORF77547 - 0.2 10.8 0.0 12 5.0 0.0 2.0 2 0 0 2 2 2 0 Anion-transporting ATPase BolA PF01722.18 ORF7742 - 3.1e-15 56.2 0.2 9e-14 51.5 0.2 2.1 1 1 0 1 1 1 1 BolA-like protein TcdA_TcdB_pore PF12920.7 ORF7742 - 0.032 12.5 0.0 0.039 12.2 0.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF3425 PF11905.8 ORF7742 - 0.086 12.8 0.0 0.097 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) JSRP PF15312.6 ORF77067 - 0.11 12.5 2.9 0.27 11.2 3.0 1.8 1 1 0 1 1 1 0 Junctional sarcoplasmic reticulum protein Sod_Fe_C PF02777.18 ORF76918 - 6.2e-32 109.8 0.6 6.8e-32 109.7 0.6 1.0 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain MaoC_dehydrat_N PF13452.6 ORF76878 - 7.7e-05 22.8 0.0 9.1e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase DUF645 PF04875.12 ORF76878 - 0.12 12.5 0.2 0.22 11.6 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function, DUF645 zf-RING_2 PF13639.6 ORF76700 - 2.3e-10 40.6 12.1 2.3e-10 40.6 12.1 1.6 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF76700 - 3.2e-06 26.9 8.5 3.2e-06 26.9 8.5 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF76700 - 1.5e-05 24.9 10.2 0.00015 21.8 5.7 2.5 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF76700 - 3.6e-05 23.4 7.9 3.6e-05 23.4 7.9 2.3 2 0 0 2 2 2 1 RING-like zinc finger Prok-RING_4 PF14447.6 ORF76700 - 9.5e-05 22.2 9.9 9.5e-05 22.2 9.9 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF76700 - 0.00037 20.4 9.5 0.00037 20.4 9.5 1.9 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF76700 - 0.00048 19.9 10.5 0.00048 19.9 10.5 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) CSRNP_N PF16019.5 ORF76700 - 0.0051 16.8 5.5 0.0062 16.5 5.5 1.2 1 0 0 1 1 1 1 Cysteine/serine-rich nuclear protein N-terminus zf-C3HC4_2 PF13923.6 ORF76700 - 0.014 15.2 12.7 0.014 15.2 12.7 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF76700 - 0.015 15.5 13.0 0.026 14.8 13.0 1.5 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_4 PF14570.6 ORF76700 - 0.018 14.8 13.1 0.06 13.2 8.3 2.4 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-ANAPC11 PF12861.7 ORF76700 - 0.025 14.6 11.3 0.036 14.1 11.3 1.4 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF76700 - 0.21 11.3 15.9 0.18 11.4 14.3 1.8 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type nlz1 PF12402.8 ORF76620 - 0.18 12.2 0.0 0.27 11.7 0.0 1.2 1 0 0 1 1 1 0 NocA-like zinc-finger protein 1 W2 PF02020.18 ORF76547 - 0.13 12.4 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 eIF4-gamma/eIF5/eIF2-epsilon DHHC PF01529.20 ORF76313 - 0.14 12.3 10.1 0.18 11.9 10.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF1127 PF06568.11 ORF76046 - 0.14 11.9 3.4 0.22 11.3 0.1 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF1127) MFS_1 PF07690.16 ORF76 - 0.0001 21.4 4.1 0.00011 21.3 4.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily UNC-93 PF05978.16 ORF76 - 0.0085 15.8 1.3 0.011 15.5 1.3 1.2 1 0 0 1 1 1 1 Ion channel regulatory protein UNC-93 DUF974 PF06159.13 ORF74945 - 0.079 12.7 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF974) DUF2441 PF10386.9 ORF74916 - 0.12 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2441) YcgR PF07317.12 ORF74804 - 0.03 14.2 0.5 0.048 13.5 0.5 1.3 1 1 0 1 1 1 0 Flagellar regulator YcgR BolA PF01722.18 ORF73502 - 3.1e-15 56.2 0.2 9e-14 51.5 0.2 2.1 1 1 0 1 1 1 1 BolA-like protein TcdA_TcdB_pore PF12920.7 ORF73502 - 0.032 12.5 0.0 0.039 12.2 0.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF3425 PF11905.8 ORF73502 - 0.086 12.8 0.0 0.097 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) zf-CCCH PF00642.24 ORF73369 - 0.45 10.5 4.1 0.45 10.5 0.9 2.1 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) ASTN_2_hairpin PF18577.1 ORF72870 - 0.11 12.7 0.2 0.27 11.4 0.1 1.7 2 0 0 2 2 2 0 Astrotactin-2 C-terminal beta-hairpin domain FAD_binding_1 PF00667.20 ORF72834 - 0.2 11.2 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain EF-hand_1 PF00036.32 ORF72287 - 6.2e-11 41.0 2.5 2.7e-05 23.4 0.4 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF72287 - 7.1e-11 42.4 1.2 9.2e-11 42.1 1.2 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF72287 - 7.1e-10 37.9 1.5 1.1e-05 24.7 0.1 2.5 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF72287 - 1.9e-08 33.6 0.7 0.0079 16.1 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF72287 - 0.00046 20.5 1.7 0.0014 19.0 1.7 1.7 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Stork_head PF10264.9 ORF72287 - 0.0011 19.1 0.0 0.0016 18.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix Storkhead-box1 domain EF-hand_8 PF13833.6 ORF72287 - 0.0048 16.7 0.7 0.42 10.5 0.1 2.3 1 1 0 2 2 2 1 EF-hand domain pair DUF1007 PF06226.13 ORF72287 - 0.015 15.3 1.2 1.7 8.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1007) GNAT_acetyltran PF12746.7 ORF72287 - 0.023 14.3 0.6 0.025 14.1 0.6 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase Peptidase_C69 PF03577.15 ORF72287 - 0.047 12.6 0.1 0.056 12.4 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C69 DUF2919 PF11143.8 ORF71865 - 0.12 12.8 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2919) PSII_Ycf12 PF05969.11 ORF70343 - 0.03 14.3 0.1 0.062 13.3 0.1 1.6 1 0 0 1 1 1 0 Photosystem II complex subunit Ycf12 DUF3087 PF11286.8 ORF70277 - 0.077 12.5 0.1 0.095 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) Polysacc_deac_1 PF01522.21 ORF69988 - 0.091 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide deacetylase DUF5538 PF17692.1 ORF69570 - 0.05 13.7 1.9 0.064 13.3 1.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) Methyltransf_8 PF05148.15 ORF69224 - 1.3e-14 54.6 0.2 6.7e-14 52.3 0.2 1.8 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_11 PF08241.12 ORF69224 - 0.013 16.1 0.0 0.028 15.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF69224 - 0.066 13.0 0.0 0.077 12.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain TC1 PF15063.6 ORF68860 - 0.079 12.8 0.0 0.19 11.6 0.0 1.6 2 0 0 2 2 2 0 Thyroid cancer protein 1 CHDCT2 PF08074.11 ORF68860 - 0.16 12.2 2.2 0.32 11.1 2.2 1.6 1 1 0 1 1 1 0 CHDCT2 (NUC038) domain ATP-synt_D PF01813.17 ORF68768 - 0.019 14.8 0.4 0.025 14.4 0.4 1.1 1 0 0 1 1 1 0 ATP synthase subunit D Milton PF12448.8 ORF68411 - 0.0032 17.6 0.2 0.0038 17.4 0.2 1.2 1 1 0 1 1 1 1 Kinesin associated protein HEPN_SAV_6107 PF18726.1 ORF68411 - 0.085 13.4 2.3 0.17 12.4 2.3 1.6 1 1 1 2 2 2 0 SAV_6107-like HEPN APG12 PF04110.13 ORF67585 - 0.035 14.5 0.4 0.059 13.8 0.4 1.4 1 0 0 1 1 1 0 Ubiquitin-like autophagy protein Apg12 RPAP1_C PF08620.10 ORF67457 - 0.023 14.8 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 RPAP1-like, C-terminal DUF2202 PF09968.9 ORF65858 - 0.015 15.1 0.6 0.018 14.9 0.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein domain (DUF2202) Hormone_1 PF00103.20 ORF65858 - 0.023 14.4 0.2 0.027 14.2 0.2 1.2 1 0 0 1 1 1 0 Somatotropin hormone family Clat_adaptor_s PF01217.20 ORF65781 - 5.6e-08 32.8 0.2 6.2e-08 32.7 0.2 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain Ribosomal_S10 PF00338.22 ORF65781 - 0.083 13.1 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S10p/S20e XhlA PF10779.9 ORF65765 - 2.1 8.6 4.3 8.5 6.7 2.0 2.2 1 1 1 2 2 2 0 Haemolysin XhlA UPF0254 PF06787.11 ORF65671 - 0.016 15.0 0.0 0.018 14.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) NMT1_2 PF13379.6 ORF65671 - 0.065 12.9 0.0 0.074 12.7 0.0 1.0 1 0 0 1 1 1 0 NMT1-like family Phostensin_N PF13916.6 ORF64196 - 0.11 12.9 0.3 0.24 11.8 0.3 1.7 1 1 0 1 1 1 0 PP1-regulatory protein, Phostensin N-terminal GFA PF04828.14 ORF64045 - 7.8e-06 26.1 0.1 9.7e-06 25.8 0.1 1.2 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme PHP PF02811.19 ORF64045 - 0.034 14.5 0.1 0.038 14.3 0.1 1.0 1 0 0 1 1 1 0 PHP domain C5HCH PF17982.1 ORF640 - 0.29 11.3 3.4 0.19 11.9 1.6 1.6 2 0 0 2 2 2 0 NSD Cys-His rich domain DUF2009 PF09418.10 ORF63919 - 0.16 11.0 0.0 0.2 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2009) Gemini_AL1_M PF08283.11 ORF63102 - 0.1 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Geminivirus rep protein central domain AFT PF08731.11 ORF62367 - 0.47 10.9 5.3 0.62 10.5 5.3 1.1 1 0 0 1 1 1 0 Transcription factor AFT zf-C3HC4_3 PF13920.6 ORF6236 - 3.9e-12 45.8 10.4 3.9e-12 45.8 10.4 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF6236 - 1.7e-07 31.0 10.0 1.7e-07 31.0 10.0 1.6 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF6236 - 0.00031 21.0 11.7 0.00031 21.0 11.7 1.6 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 ORF6236 - 0.0011 18.9 9.1 0.0011 18.9 9.1 1.6 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_4 PF14570.6 ORF6236 - 0.094 12.5 7.3 0.16 11.7 7.3 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Arf PF00025.21 ORF61815 - 1.5e-22 79.8 0.0 1.7e-22 79.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family FBPase_3 PF01950.16 ORF60440 - 0.12 11.6 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Fructose-1,6-bisphosphatase RVT_1 PF00078.27 ORF60266 - 1.9e-11 43.9 0.1 1.9e-11 43.9 0.1 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) UQ_con PF00179.26 ORF59968 - 2.8e-28 98.3 1.3 3.1e-28 98.2 1.3 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF59968 - 0.064 13.5 0.1 0.071 13.4 0.1 1.2 1 0 0 1 1 1 0 RWD domain Roc PF08477.13 ORF59749 - 0.014 15.6 0.0 0.018 15.3 0.0 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_14 PF13173.6 ORF59749 - 0.024 14.7 0.0 0.03 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 ORF59749 - 0.029 13.9 0.0 0.03 13.9 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Ras PF00071.22 ORF59749 - 0.036 13.7 0.0 0.037 13.6 0.0 1.2 1 0 0 1 1 1 0 Ras family AAA_18 PF13238.6 ORF59749 - 0.052 14.1 0.0 0.062 13.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 ORF59749 - 0.06 13.4 0.3 0.071 13.2 0.3 1.4 1 1 0 1 1 1 0 Dynamin family SPC25 PF06703.11 ORF59749 - 0.14 11.9 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) TniB PF05621.11 ORF59749 - 0.16 11.4 0.0 0.21 11.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein Fib_alpha PF08702.10 ORF59361 - 0.11 12.6 1.1 0.13 12.4 1.1 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family TPK_catalytic PF04263.16 ORF59361 - 0.22 11.6 1.5 1.1 9.3 1.5 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain XPG_N PF00752.17 ORF59186 - 0.028 14.9 0.1 0.046 14.2 0.1 1.4 1 0 0 1 1 1 0 XPG N-terminal domain CENP-K PF11802.8 ORF58907 - 0.0062 16.1 0.5 0.0068 16.0 0.5 1.0 1 0 0 1 1 1 1 Centromere-associated protein K DUF1297 PF06973.12 ORF58696 - 0.19 11.3 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1297) PheRS_DBD2 PF18554.1 ORF58442 - 0.16 12.0 1.7 3 7.9 0.9 2.3 2 0 0 2 2 2 0 PheRS DNA binding domain 2 LPAM_2 PF13627.6 ORF58400 - 1.2 9.1 8.6 1.3 9.0 0.2 2.6 2 0 0 2 2 2 0 Prokaryotic lipoprotein-attachment site Sec23_helical PF04815.15 ORF58032 - 0.11 12.3 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 Sec23/Sec24 helical domain HAMP PF00672.25 ORF58030 - 0.075 13.4 0.2 0.12 12.8 0.2 1.3 1 0 0 1 1 1 0 HAMP domain DUF4795 PF16043.5 ORF57787 - 0.063 12.9 0.0 0.063 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF883 PF05957.13 ORF57787 - 0.076 13.6 0.0 0.12 12.9 0.0 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) WH1 PF00568.23 ORF57459 - 0.0052 16.7 0.0 0.007 16.3 0.0 1.1 1 0 0 1 1 1 1 WH1 domain DUF4413 PF14372.6 ORF57459 - 0.066 13.6 0.2 0.081 13.3 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4413) ACD PF16671.5 ORF56793 - 0.2 9.9 0.0 0.23 9.7 0.0 1.1 1 0 0 1 1 1 0 Actin cross-linking domain DUF3091 PF11291.8 ORF5656 - 0.0092 16.1 0.7 0.015 15.5 0.5 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3091) TetR_C_2 PF08361.11 ORF5656 - 0.016 15.3 0.7 0.02 15.0 0.6 1.3 1 1 0 1 1 1 0 MAATS-type transcriptional repressor, C-terminal region zf-C2H2_4 PF13894.6 ORF56462 - 1.1e-05 25.9 10.3 0.0024 18.5 3.5 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF56462 - 0.0003 21.1 9.9 0.028 14.9 0.6 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_11 PF16622.5 ORF56462 - 0.015 15.0 6.0 0.032 14.0 1.7 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type HHV-1_VABD PF16852.5 ORF56462 - 0.015 15.3 2.4 0.028 14.4 1.8 1.7 2 0 0 2 2 2 0 Herpes viral adaptor-to-host cellular mRNA binding domain FYVE PF01363.21 ORF56462 - 0.069 13.3 2.7 0.12 12.5 2.7 1.4 1 1 0 1 1 1 0 FYVE zinc finger zf-H2C2_2 PF13465.6 ORF56462 - 0.094 13.2 0.4 0.094 13.2 0.4 2.8 3 0 0 3 3 3 0 Zinc-finger double domain Endonuclease_1 PF04231.13 ORF55361 - 4e-19 69.2 0.0 4.7e-19 69.0 0.0 1.0 1 0 0 1 1 1 1 Endonuclease I Init_tRNA_PT PF04179.12 ORF54432 - 0.061 13.6 0.1 0.078 13.3 0.1 1.2 1 0 0 1 1 1 0 Rit1 DUSP-like domain Efg1 PF10153.9 ORF53506 - 3.3e-08 33.9 10.0 3.3e-08 33.9 10.0 1.7 2 0 0 2 2 2 1 rRNA-processing protein Efg1 DUF4337 PF14235.6 ORF53506 - 1.7 8.7 6.3 2 8.5 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) HSA PF07529.13 ORF53211 - 1.4 9.3 7.2 1.2 9.6 0.5 2.8 2 1 0 2 2 2 0 HSA EF-hand_7 PF13499.6 ORF52722 - 0.064 13.7 1.6 2.3 8.7 1.6 2.2 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF52722 - 0.34 10.5 1.7 4.6 7.0 0.2 2.6 2 0 0 2 2 2 0 EF hand EF-hand_6 PF13405.6 ORF52722 - 1.8 8.7 4.8 19 5.5 0.3 2.6 1 1 1 2 2 2 0 EF-hand domain DUF1010 PF06231.11 ORF52586 - 0.11 13.1 0.0 0.14 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) Plus-3 PF03126.18 ORF52476 - 0.0094 16.5 0.1 0.01 16.3 0.1 1.2 1 0 0 1 1 1 1 Plus-3 domain Lantibiotic_a PF14867.6 ORF52310 - 0.06 13.1 0.4 0.11 12.3 0.4 1.4 1 0 0 1 1 1 0 Lantibiotic alpha Bacillus_HBL PF05791.11 ORF52141 - 0.011 15.6 0.4 0.012 15.5 0.4 1.2 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) Dynein_attach_N PF15867.5 ORF52141 - 0.054 13.5 0.0 0.096 12.7 0.0 1.3 1 0 0 1 1 1 0 Dynein attachment factor N-terminus Ank_2 PF12796.7 ORF52073 - 1.8e-05 25.2 0.0 2.5e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF52073 - 9.3e-05 22.9 0.0 0.00042 20.8 0.0 2.0 2 1 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF52073 - 0.0069 16.8 0.0 7.1 7.5 0.0 2.7 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF52073 - 0.015 15.7 0.0 15 6.3 0.0 3.1 3 0 0 3 3 3 0 Ankyrin repeat DUF383 PF04063.14 ORF51927 - 0.039 13.6 0.1 0.043 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF383) DUF1778 PF08681.11 ORF51927 - 0.044 13.7 1.8 0.22 11.4 1.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1778) NADH_4Fe-4S PF10589.9 ORF51581 - 0.0065 16.5 0.0 0.0093 16.0 0.0 1.2 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Glyco_transf_34 PF05637.12 ORF51200 - 0.0092 15.7 0.0 0.0092 15.7 0.0 1.2 1 0 0 1 1 1 1 galactosyl transferase GMA12/MNN10 family Abhydrolase_1 PF00561.20 ORF50930 - 7.2e-09 35.7 0.0 7.8e-09 35.6 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Phostensin_N PF13916.6 ORF5048 - 0.11 12.9 0.3 0.24 11.8 0.3 1.7 1 1 0 1 1 1 0 PP1-regulatory protein, Phostensin N-terminal PapD_C PF02753.17 ORF49340 - 2.7e-15 56.4 0.0 3.7e-15 56.0 0.0 1.2 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain Corona_NS2 PF04753.12 ORF4928 - 0.092 13.3 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 Conotoxin PF02950.17 ORF49128 - 0.15 13.1 0.2 0.19 12.7 0.2 1.2 1 0 0 1 1 1 0 Conotoxin EF-hand_1 PF00036.32 ORF49009 - 1e-09 37.2 1.8 0.0012 18.3 0.2 2.6 2 1 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF49009 - 4.1e-09 36.8 0.7 5.5e-09 36.4 0.5 1.3 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF49009 - 4.7e-09 35.4 0.2 0.00056 19.6 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF49009 - 1.8e-08 34.1 1.7 1.3e-05 24.9 0.3 2.5 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF49009 - 6.4e-07 28.6 4.1 0.012 15.1 0.2 2.5 2 1 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF49009 - 0.077 13.0 2.2 0.89 9.5 0.2 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand DUF1310 PF07006.11 ORF49009 - 0.084 12.9 0.3 0.12 12.4 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1310) Sugar_tr PF00083.24 ORF48892 - 9.7e-06 24.7 3.7 1.1e-05 24.5 3.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter ORC_WH_C PF18137.1 ORF4794 - 0.083 13.0 0.0 0.083 13.0 0.0 1.1 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal T4-gp15_tss PF16724.5 ORF4794 - 0.24 11.1 0.0 0.3 10.8 0.0 1.1 1 0 0 1 1 1 0 T4-like virus Myoviridae tail sheath stabiliser Peptidase_S31 PF05578.12 ORF47795 - 0.015 14.8 0.0 0.018 14.6 0.0 1.1 1 0 0 1 1 1 0 Pestivirus NS3 polyprotein peptidase S31 DUF3211 PF11485.8 ORF47480 - 0.02 15.1 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3211) LPD28 PF18843.1 ORF47480 - 0.068 12.8 0.1 0.082 12.5 0.1 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 28 Stn1 PF10451.9 ORF47241 - 0.13 11.2 0.8 0.15 11.0 0.8 1.0 1 0 0 1 1 1 0 Telomere regulation protein Stn1 APP_Cu_bd PF12924.7 ORF4655 - 0.035 14.8 4.4 0.056 14.2 4.4 1.4 1 0 0 1 1 1 0 Copper-binding of amyloid precursor, CuBD ERK-JNK_inhib PF15002.6 ORF45786 - 0.0079 15.9 0.1 0.011 15.4 0.1 1.3 1 1 0 1 1 1 1 ERK and JNK pathways, inhibitor Sipho_Gp157 PF05565.11 ORF45786 - 0.095 12.7 0.2 0.13 12.3 0.2 1.1 1 0 0 1 1 1 0 Siphovirus Gp157 Chromosome_seg PF13889.6 ORF44066 - 0.086 13.0 0.5 2 8.6 0.5 2.2 1 1 0 1 1 1 0 Chromosome segregation during meiosis Swm2 PF17083.5 ORF43991 - 0.043 13.8 2.1 0.052 13.6 2.1 1.0 1 0 0 1 1 1 0 Nucleolar protein Swm2 Ig_Tie2_1 PF10430.9 ORF43991 - 0.048 14.1 0.3 0.073 13.5 0.3 1.3 1 0 0 1 1 1 0 Tie-2 Ig-like domain 1 MDFI PF15316.6 ORF43215 - 0.51 10.4 2.3 0.59 10.2 2.3 1.1 1 0 0 1 1 1 0 MyoD family inhibitor TMEM126 PF07114.11 ORF42885 - 0.067 12.6 0.2 8.9 5.7 0.0 2.1 2 0 0 2 2 2 0 Transmembrane protein 126 SMAP PF15477.6 ORF42735 - 0.0017 19.3 0.3 0.0023 18.8 0.3 1.4 1 1 0 1 1 1 1 Small acidic protein family EF-hand_1 PF00036.32 ORF42457 - 0.011 15.2 1.1 0.032 13.8 0.1 2.3 3 0 0 3 3 3 0 EF hand EF-hand_7 PF13499.6 ORF42457 - 0.053 14.0 1.0 0.25 11.8 1.0 2.0 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF41507 - 1e-09 37.2 1.8 0.0012 18.3 0.2 2.6 2 1 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF41507 - 4.1e-09 36.8 0.7 5.5e-09 36.4 0.5 1.3 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF41507 - 4.7e-09 35.4 0.2 0.00056 19.6 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF41507 - 1.8e-08 34.1 1.7 1.3e-05 24.9 0.3 2.5 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF41507 - 6.4e-07 28.6 4.1 0.012 15.1 0.2 2.5 2 1 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF41507 - 0.077 13.0 2.2 0.89 9.5 0.2 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand DUF1310 PF07006.11 ORF41507 - 0.084 12.9 0.3 0.12 12.4 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1310) MORN PF02493.20 ORF41197 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF41197 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF41197 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Abhydrolase_3 PF07859.13 ORF41126 - 5e-07 29.8 0.0 5.4e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF5527 PF17665.1 ORF40862 - 0.0044 16.6 0.0 0.0048 16.4 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5527) Nairo_nucleo PF02477.15 ORF40705 - 0.11 11.3 0.3 0.12 11.2 0.3 1.0 1 0 0 1 1 1 0 Nucleocapsid N protein DUF2202 PF09968.9 ORF40682 - 0.015 15.1 0.6 0.018 14.9 0.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein domain (DUF2202) Hormone_1 PF00103.20 ORF40682 - 0.023 14.4 0.2 0.027 14.2 0.2 1.2 1 0 0 1 1 1 0 Somatotropin hormone family FBPase_3 PF01950.16 ORF40298 - 0.12 11.6 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Fructose-1,6-bisphosphatase Complex1_LYR PF05347.15 ORF39164 - 0.0013 18.7 0.7 0.0025 17.8 0.7 1.5 1 1 0 1 1 1 1 Complex 1 protein (LYR family) DUF3314 PF11771.8 ORF39078 - 0.066 13.3 0.1 0.077 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3314) zf-B_box PF00643.24 ORF38675 - 0.00055 20.0 8.5 0.00083 19.5 8.5 1.2 1 0 0 1 1 1 1 B-box zinc finger KCNQ2_u3 PF16642.5 ORF38533 - 0.48 11.4 6.5 1.5 9.9 2.7 2.0 1 1 1 2 2 2 0 Unstructured region on Potassium channel subunit alpha KvLQT2 COPI_assoc PF08507.10 ORF38215 - 1.2e-05 25.4 1.3 1.6e-05 25.0 1.3 1.2 1 0 0 1 1 1 1 COPI associated protein YtpI PF14007.6 ORF38215 - 0.0059 16.7 0.3 0.0086 16.2 0.3 1.4 1 0 0 1 1 1 1 YtpI-like protein TMEM72 PF16054.5 ORF38215 - 0.013 15.2 0.4 0.015 15.0 0.4 1.2 1 0 0 1 1 1 0 Transmembrane protein family 72 Neurensin PF14927.6 ORF38215 - 0.047 13.4 0.4 0.052 13.2 0.4 1.3 1 0 0 1 1 1 0 Neurensin Phage_holin_3_6 PF07332.11 ORF38215 - 0.18 11.9 3.2 0.24 11.5 3.2 1.3 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF202 PF02656.15 ORF38215 - 0.2 12.1 2.1 0.3 11.6 1.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF1599 PF07659.11 ORF3817 - 0.066 13.7 0.1 0.15 12.5 0.0 1.7 1 1 1 2 2 2 0 Nucleotide modification associated domain 1 PP2C PF00481.21 ORF36837 - 6.3e-09 35.8 0.0 6.5e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF36837 - 0.0084 16.0 0.0 0.0092 15.9 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Robl_LC7 PF03259.17 ORF36820 - 0.0089 15.8 0.0 0.01 15.6 0.0 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain Robl_LC7 PF03259.17 ORF36800 - 0.0089 15.8 0.0 0.01 15.6 0.0 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF667 PF05018.13 ORF35273 - 4.6e-43 147.1 0.8 5.2e-43 146.9 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) mono-CXXC PF15626.6 ORF3446 - 0.0067 16.8 4.8 0.0067 16.8 4.8 2.0 1 1 1 2 2 2 1 single CXXC unit MORN PF02493.20 ORF34164 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF34164 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF34164 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Glu_synthase PF01645.17 ORF33334 - 0.04 13.0 0.5 0.048 12.8 0.5 1.0 1 0 0 1 1 1 0 Conserved region in glutamate synthase CHIP_TPR_N PF18391.1 ORF33334 - 0.1 13.4 4.0 0.83 10.5 0.4 2.1 2 0 0 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain SRCR PF00530.18 ORF33140 - 0.11 13.0 0.0 0.13 12.8 0.0 1.2 1 0 0 1 1 1 0 Scavenger receptor cysteine-rich domain 12TM_1 PF09847.9 ORF32669 - 0.087 11.9 5.1 0.11 11.6 2.5 1.8 1 1 1 2 2 2 0 Membrane protein of 12 TMs DUF1010 PF06231.11 ORF32584 - 0.11 13.1 0.0 0.14 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) Tmemb_9 PF05434.11 ORF32120 - 0.0036 17.2 1.7 0.0041 17.0 1.7 1.1 1 0 0 1 1 1 1 TMEM9 Caleosin PF05042.13 ORF32120 - 0.022 14.7 0.3 0.026 14.5 0.3 1.0 1 0 0 1 1 1 0 Caleosin related protein GTP_cyclohydro2 PF00925.20 ORF32120 - 0.045 13.3 0.1 0.05 13.2 0.1 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase II Mso1_Sec1_bdg PF14475.6 ORF32120 - 2.2 7.9 3.4 66 3.2 0.0 3.2 3 0 0 3 3 3 0 Sec1-binding region of Mso1 FAST_1 PF06743.15 ORF31851 - 0.081 12.9 0.1 0.2 11.6 0.1 1.8 1 1 0 1 1 1 0 FAST kinase-like protein, subdomain 1 Lge1 PF11488.8 ORF31795 - 0.00055 20.1 8.3 0.00082 19.5 8.3 1.3 1 0 0 1 1 1 1 Transcriptional regulatory protein LGE1 CENP-F_leu_zip PF10473.9 ORF31795 - 0.0016 18.5 10.5 0.002 18.1 10.5 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3450 PF11932.8 ORF31795 - 0.0037 16.6 6.3 0.005 16.2 6.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) MbeD_MobD PF04899.12 ORF31795 - 0.0046 17.0 0.8 0.008 16.3 0.7 1.4 2 0 0 2 2 1 1 MbeD/MobD like YlqD PF11068.8 ORF31795 - 0.0063 16.9 7.3 0.047 14.1 0.5 2.0 1 1 1 2 2 2 1 YlqD protein TMF_TATA_bd PF12325.8 ORF31795 - 0.0098 16.1 10.0 0.012 15.8 10.0 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding GAS PF13851.6 ORF31795 - 0.016 14.5 10.4 0.02 14.3 10.4 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Tropomyosin_1 PF12718.7 ORF31795 - 0.018 15.2 8.0 0.018 15.2 8.0 2.0 1 1 0 1 1 1 0 Tropomyosin like Spc29 PF17082.5 ORF31795 - 0.018 14.9 7.8 0.024 14.5 7.8 1.3 1 1 0 1 1 1 0 Spindle Pole Component 29 Jnk-SapK_ap_N PF09744.9 ORF31795 - 0.02 15.1 11.0 0.03 14.6 11.1 1.3 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF641 PF04859.12 ORF31795 - 0.021 15.2 2.0 0.021 15.2 2.0 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) APG6_N PF17675.1 ORF31795 - 0.027 15.0 11.1 0.074 13.6 11.1 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region DivIC PF04977.15 ORF31795 - 0.028 14.2 12.0 0.042 13.6 4.4 2.9 1 1 2 3 3 3 0 Septum formation initiator CLZ PF16526.5 ORF31795 - 0.029 14.7 6.7 0.23 11.9 6.7 2.2 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF3552 PF12072.8 ORF31795 - 0.038 13.4 11.6 0.05 13.0 11.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) DUF1664 PF07889.12 ORF31795 - 0.045 13.8 5.7 0.032 14.2 2.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Lebercilin PF15619.6 ORF31795 - 0.045 13.4 12.3 0.051 13.2 12.3 1.0 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease WD40_alt PF14077.6 ORF31795 - 0.051 13.4 2.8 0.23 11.4 0.2 2.4 1 1 1 2 2 2 0 Alternative WD40 repeat motif Fzo_mitofusin PF04799.13 ORF31795 - 0.054 13.1 5.9 0.04 13.5 3.8 1.7 1 1 1 2 2 2 0 fzo-like conserved region Spc7 PF08317.11 ORF31795 - 0.078 11.8 8.6 0.084 11.7 8.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4337 PF14235.6 ORF31795 - 0.081 13.0 2.4 0.08 13.0 2.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) DUF5082 PF16888.5 ORF31795 - 0.083 13.2 11.4 0.21 11.9 2.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) ATG16 PF08614.11 ORF31795 - 0.084 13.1 10.5 0.043 14.0 8.0 1.5 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Baculo_PEP_C PF04513.12 ORF31795 - 0.086 12.9 3.8 0.15 12.1 3.8 1.5 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus T3SS_needle_F PF09392.10 ORF31795 - 0.12 12.6 2.7 6.4 7.1 0.0 3.0 2 1 1 3 3 3 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF OmpH PF03938.14 ORF31795 - 0.13 12.6 7.3 0.16 12.3 7.3 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Troponin PF00992.20 ORF31795 - 0.14 12.5 8.8 0.27 11.5 8.3 1.8 1 1 0 1 1 1 0 Troponin DUF948 PF06103.11 ORF31795 - 0.16 12.2 4.5 1 9.7 1.7 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) STAT_alpha PF01017.20 ORF31795 - 0.16 11.8 7.2 0.18 11.7 7.2 1.1 1 0 0 1 1 1 0 STAT protein, all-alpha domain FlaC_arch PF05377.11 ORF31795 - 0.18 12.2 10.9 0.71 10.3 4.7 2.8 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF2730 PF10805.8 ORF31795 - 0.18 11.9 2.6 0.3 11.2 2.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2730) DUF724 PF05266.14 ORF31795 - 0.2 11.5 6.9 0.15 11.8 5.7 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF724) BRE1 PF08647.11 ORF31795 - 0.24 11.5 10.4 0.23 11.5 2.1 2.7 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF31795 - 0.24 12.0 8.1 0.21 12.2 6.8 1.6 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 UPF0242 PF06785.11 ORF31795 - 0.27 11.3 12.9 0.55 10.3 12.9 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Borrelia_REV PF03978.13 ORF31795 - 0.28 11.1 6.7 0.32 10.9 6.7 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi REV protein SlyX PF04102.12 ORF31795 - 0.36 11.5 5.7 0.39 11.4 3.4 2.1 1 1 1 2 2 2 0 SlyX Swi5 PF07061.11 ORF31795 - 0.41 10.8 7.5 2.1 8.5 0.6 2.4 1 1 1 2 2 2 0 Swi5 Exonuc_VII_L PF02601.15 ORF31795 - 0.46 10.0 4.4 0.5 9.9 4.4 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Spc24 PF08286.11 ORF31795 - 0.61 10.3 10.9 16 5.8 10.9 2.2 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF5446 PF17522.2 ORF31795 - 0.64 10.2 9.7 0.45 10.7 7.2 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5446) DUF3847 PF12958.7 ORF31795 - 0.64 10.2 6.5 1.4 9.1 3.7 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3847) TMPIT PF07851.13 ORF31795 - 0.65 9.2 4.9 0.75 9.0 4.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein TolA_bind_tri PF16331.5 ORF31795 - 0.7 10.0 10.3 2.5 8.2 6.8 2.2 1 1 1 2 2 2 0 TolA binding protein trimerisation V_ATPase_I PF01496.19 ORF31795 - 1.1 7.0 6.5 1.2 7.0 6.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family zf-C4H2 PF10146.9 ORF31795 - 1.7 8.9 8.2 4.5 7.5 8.2 1.7 1 1 0 1 1 1 0 Zinc finger-containing protein Atg14 PF10186.9 ORF31795 - 2 7.4 7.7 2.5 7.1 7.7 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LMBR1 PF04791.16 ORF31795 - 5.2 5.9 4.4 5.7 5.7 4.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein PdaC PF13739.6 ORF31795 - 5.8 8.0 6.7 3.6 8.6 2.8 2.0 1 1 1 2 2 2 0 Deacetylase PdaC H-kinase_dim PF02895.14 ORF31770 - 0.068 13.6 0.2 0.13 12.7 0.2 1.4 1 1 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain Mannosyl_trans PF05007.13 ORF3164 - 2.3e-18 67.0 12.3 2.6e-18 66.8 12.3 1.0 1 0 0 1 1 1 1 Mannosyltransferase (PIG-M) Peptidase_Prp PF04327.12 ORF31467 - 0.1 12.8 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Cysteine protease Prp Ribosomal_S15 PF00312.22 ORF31412 - 0.11 12.7 0.4 0.17 12.1 0.4 1.2 1 0 0 1 1 1 0 Ribosomal protein S15 Exc PF07825.11 ORF30423 - 0.24 11.4 8.4 1.1 9.3 0.6 2.4 1 1 2 3 3 3 0 Excisionase-like protein Phg_2220_C PF09524.10 ORF30379 - 0.16 12.1 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) TerY_C PF15616.6 ORF29789 - 0.039 14.1 0.2 0.042 14.0 0.2 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain ORC6 PF05460.13 ORF2913 - 0.11 11.8 3.8 0.11 11.7 3.8 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) DUF5542 PF17696.1 ORF28755 - 0.35 11.0 1.0 0.53 10.4 1.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5542) DUF523 PF04463.12 ORF28348 - 0.061 13.4 0.2 0.1 12.6 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF523) PARP PF00644.20 ORF27941 - 5.5e-12 45.7 1.2 2.7e-06 27.1 0.0 2.0 1 1 1 2 2 2 2 Poly(ADP-ribose) polymerase catalytic domain SEO_N PF14576.6 ORF27382 - 0.26 10.4 1.6 0.46 9.6 0.2 1.8 1 1 1 2 2 2 0 Sieve element occlusion N-terminus DUF383 PF04063.14 ORF27206 - 0.039 13.6 0.1 0.043 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF383) DUF1778 PF08681.11 ORF27206 - 0.044 13.7 1.8 0.22 11.4 1.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1778) ATP-grasp PF02222.22 ORF27010 - 0.14 11.8 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain Lys_export PF03956.13 ORF25831 - 1.3e-38 132.4 4.5 1.4e-38 132.3 4.5 1.0 1 0 0 1 1 1 1 Lysine exporter LysO DHHC PF01529.20 ORF25534 - 0.14 12.3 10.1 0.18 11.9 10.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Cupin_8 PF13621.6 ORF25259 - 4.4e-07 29.9 0.1 1.6e-06 28.1 0.1 1.8 1 1 0 1 1 1 1 Cupin-like domain Cupin_2 PF07883.11 ORF25259 - 0.00022 20.9 0.0 0.00037 20.1 0.0 1.4 1 0 0 1 1 1 1 Cupin domain Cupin_4 PF08007.12 ORF25259 - 0.00078 19.0 0.0 0.00093 18.7 0.0 1.2 1 0 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF25259 - 0.011 16.2 0.0 0.015 15.7 0.0 1.2 1 0 0 1 1 1 0 JmjC domain, hydroxylase AraC_binding PF02311.19 ORF25259 - 0.019 14.9 0.1 0.046 13.6 0.0 1.7 2 1 1 3 3 3 0 AraC-like ligand binding domain Cupin_6 PF12852.7 ORF25259 - 0.02 14.6 0.0 0.02 14.6 0.0 1.2 1 0 0 1 1 1 0 Cupin Cupin_3 PF05899.12 ORF25259 - 0.036 13.7 0.0 0.058 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Nipped-B_C PF12830.7 ORF25115 - 0.21 11.5 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus Abhydrolase_3 PF07859.13 ORF23965 - 2.5e-19 70.0 0.0 3e-19 69.7 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 ORF23965 - 0.076 11.9 0.0 0.094 11.6 0.0 1.1 1 0 0 1 1 1 0 Carboxylesterase family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks235.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks235.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks235.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks235.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:57:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF563 PF04577.14 ORF22959 - 0.0022 18.2 0.0 0.0025 18.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF563) TAXi_N PF14543.6 ORF22959 - 0.0061 16.8 0.1 0.0072 16.6 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal UQ_con PF00179.26 ORF22384 - 8.8e-28 96.7 0.2 9.7e-28 96.6 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Pkinase PF00069.25 ORF22374 - 6e-10 38.9 0.0 6.7e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22374 - 0.015 14.6 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase TLD PF07534.16 ORF21921 - 0.0099 16.1 0.0 0.022 15.0 0.0 1.5 2 0 0 2 2 2 1 TLD AAA_8 PF12780.7 ORF21921 - 0.11 11.8 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 Histone PF00125.24 ORF2192 - 6.5e-26 91.2 0.2 7.2e-26 91.1 0.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 ORF2192 - 0.00011 22.2 0.0 0.00014 21.9 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF2192 - 0.00031 21.0 0.0 0.00038 20.7 0.0 1.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-S PF15630.6 ORF2192 - 0.0072 16.7 0.0 0.0084 16.5 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 ORF2192 - 0.014 15.4 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit MORN PF02493.20 ORF21703 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF21703 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF21703 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Acetyltransf_10 PF13673.7 ORF21170 - 0.0097 15.8 0.0 0.012 15.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF3098 PF11297.8 ORF20111 - 0.0017 17.9 1.7 0.084 12.5 0.5 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF3098) DUF3784 PF12650.7 ORF20111 - 0.017 15.3 2.4 0.017 15.3 2.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3784) DUF3185 PF11381.8 ORF20111 - 0.056 13.5 0.1 0.12 12.5 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) Saf_2TM PF18303.1 ORF20111 - 0.099 12.2 0.2 0.12 11.9 0.2 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain UPF0242 PF06785.11 ORF20111 - 1.9 8.5 3.4 3 7.9 3.4 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF535 PF04393.13 ORF19974 - 6.2e-39 133.9 1.4 6.8e-39 133.8 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF535) DUF640 PF04852.12 ORF19974 - 0.022 14.9 0.0 0.026 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF640) ORF11CD3 PF10549.9 ORF19287 - 0.19 11.9 0.2 0.32 11.1 0.2 1.4 1 1 0 1 1 1 0 ORF11CD3 domain DUF4092 PF13322.6 ORF18281 - 0.08 12.8 0.1 0.083 12.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4092) DUF5531 PF17671.1 ORF18281 - 0.25 11.2 1.3 0.35 10.8 1.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5531) NYAP_C PF15452.6 ORF17867 - 0.093 12.6 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter Sod_Fe_C PF02777.18 ORF17860 - 6.2e-32 109.8 0.6 6.8e-32 109.7 0.6 1.0 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain PetL PF05115.14 ORF17791 - 0.98 9.5 8.4 2.3 8.2 8.4 1.7 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) DUF2247 PF10004.9 ORF17321 - 0.0017 18.2 2.3 0.0019 18.0 2.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2247) DUF4763 PF15960.5 ORF17321 - 0.017 14.5 5.0 0.02 14.2 5.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) PikAIV_N PF18605.1 ORF17321 - 0.027 14.0 0.1 0.051 13.2 0.1 1.5 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Tli4_N PF18443.1 ORF17321 - 0.061 13.7 1.9 0.071 13.5 1.9 1.1 1 0 0 1 1 1 0 Tle cognate immunity protein 4 N-terminal domain DUF3073 PF11273.8 ORF17321 - 0.083 13.6 4.2 0.14 12.9 4.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3073) YabA PF06156.13 ORF17321 - 0.15 12.7 3.6 0.19 12.3 3.6 1.3 1 0 0 1 1 1 0 Initiation control protein YabA Cep57_CLD_2 PF14197.6 ORF17321 - 0.21 11.7 8.9 2.7 8.1 0.3 2.2 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 MORN PF02493.20 ORF16488 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF16488 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF16488 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation MIP PF00230.20 ORF16151 - 6.6e-19 68.5 6.4 7.2e-19 68.4 6.4 1.0 1 0 0 1 1 1 1 Major intrinsic protein DnaJ PF00226.31 ORF16012 - 2.5e-15 56.3 0.4 3.8e-15 55.7 0.1 1.5 2 0 0 2 2 2 1 DnaJ domain Ish1 PF10281.9 ORF16012 - 0.00054 20.2 0.0 0.00096 19.4 0.0 1.4 1 0 0 1 1 1 1 Putative stress-responsive nuclear envelope protein HATPase_c PF02518.26 ORF15994 - 4.9e-13 49.6 0.0 5.4e-13 49.4 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 ORF15994 - 0.001 18.9 0.0 0.0013 18.6 0.0 1.1 1 0 0 1 1 1 1 GHKL domain Ion_trans PF00520.31 ORF15710 - 7e-25 87.7 4.9 7.9e-25 87.5 4.9 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF15710 - 7.5e-05 21.6 3.4 0.035 12.8 0.5 2.0 1 1 1 2 2 2 2 Polycystin cation channel TraD_N PF12615.8 ORF15634 - 0.066 14.0 0.2 0.077 13.8 0.2 1.1 1 0 0 1 1 1 0 F sex factor protein N terminal Pro_isomerase PF00160.21 ORF15581 - 4.2e-25 88.9 0.0 4.6e-25 88.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Roc PF08477.13 ORF1501 - 4.4e-24 85.0 0.2 5.1e-24 84.8 0.2 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF1501 - 1.3e-22 80.2 0.2 1.4e-22 80.0 0.2 1.0 1 0 0 1 1 1 1 Ras family Arf PF00025.21 ORF1501 - 1.3e-10 41.0 0.0 1.5e-10 40.8 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF1501 - 2.8e-05 23.6 0.0 3.4e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 ORF1501 - 0.00013 22.0 0.0 0.00015 21.9 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF1501 - 0.00018 21.0 0.1 0.00026 20.5 0.1 1.2 1 1 0 1 1 1 1 P-loop containing dynein motor region Gtr1_RagA PF04670.12 ORF1501 - 0.0018 17.7 0.0 0.002 17.5 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region TniB PF05621.11 ORF1501 - 0.0024 17.3 0.0 0.0028 17.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein Septin PF00735.18 ORF1501 - 0.0026 17.1 0.0 0.003 16.9 0.0 1.1 1 0 0 1 1 1 1 Septin G-alpha PF00503.20 ORF1501 - 0.03 13.5 0.1 0.4 9.8 0.0 1.9 1 1 1 2 2 2 0 G-protein alpha subunit Pox_A32 PF04665.12 ORF1501 - 0.038 13.4 0.1 0.08 12.4 0.0 1.5 1 1 1 2 2 2 0 Poxvirus A32 protein DUF881 PF05949.12 ORF1501 - 0.041 13.7 0.0 0.054 13.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF881) Chorein_N PF12624.7 ORF1501 - 0.055 13.6 0.1 0.16 12.1 0.1 1.8 2 1 0 2 2 2 0 N-terminal region of Chorein or VPS13 RsgA_GTPase PF03193.16 ORF1501 - 0.068 13.1 0.0 0.068 13.1 0.0 1.2 1 1 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 ORF1501 - 0.087 13.2 0.0 0.087 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain GTP_EFTU PF00009.27 ORF1501 - 0.11 12.0 0.0 0.92 9.0 0.0 1.9 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain UL21a PF17636.2 ORF13831 - 0.043 13.8 0.3 0.067 13.2 0.3 1.3 1 0 0 1 1 1 0 Viral Unique Long protein 21a zf-Tim10_DDP PF02953.15 ORF13696 - 5.8e-05 22.6 0.8 5.8e-05 22.6 0.8 1.7 2 0 0 2 2 2 1 Tim10/DDP family zinc finger DUF842 PF05811.13 ORF13696 - 0.035 13.8 1.2 0.038 13.7 1.2 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) PD-C2-AF1 PF09310.10 ORF12551 - 0.093 12.1 0.2 0.12 11.7 0.2 1.2 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 Novirhabdo_Nv PF05554.11 ORF12368 - 0.037 13.8 0.9 2.6 7.8 0.0 2.1 2 0 0 2 2 2 0 Viral hemorrhagic septicemia virus non-virion protein E3_binding PF02817.17 ORF12097 - 0.16 12.3 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 e3 binding domain zf-P11 PF03854.14 ORF11257 - 0.53 10.0 7.8 6 6.6 2.1 2.8 3 0 0 3 3 3 0 P-11 zinc finger PROL5-SMR PF15621.6 ORF112131 - 0.031 14.8 0.8 0.044 14.3 0.5 1.4 1 1 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family XAF1_C PF18608.1 ORF112131 - 0.12 12.0 0.1 0.21 11.2 0.1 1.3 1 0 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain MORN PF02493.20 ORF111364 - 0.42 10.6 2.6 0.59 10.1 0.2 2.4 3 0 0 3 3 3 0 MORN repeat DUF4498 PF14926.6 ORF109882 - 1.8e-34 119.2 1.2 2e-34 119.0 1.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4498) Mer2 PF09074.10 ORF108249 - 0.0076 16.1 2.0 0.0078 16.1 2.0 1.1 1 0 0 1 1 1 1 Mer2 DUF269 PF03270.13 ORF108249 - 0.034 14.3 0.1 0.035 14.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF269 WHEP-TRS PF00458.20 ORF108104 - 0.0098 16.0 0.9 0.016 15.3 0.9 1.2 1 0 0 1 1 1 1 WHEP-TRS domain Ac76 PF05814.11 ORF108104 - 0.12 12.5 0.1 0.16 12.0 0.1 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) DUF2721 PF11026.8 ORF107589 - 9.4 6.1 10.1 2.6e+02 1.5 10.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) DUF3631 PF12307.8 ORF106740 - 0.067 13.4 0.0 0.08 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3631) DUF3496 PF12001.8 ORF10661 - 0.028 14.8 5.7 0.035 14.5 5.7 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3496) DHR10 PF18595.1 ORF10661 - 0.076 13.1 5.8 0.091 12.8 5.8 1.2 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain SlyX PF04102.12 ORF106358 - 0.0022 18.6 1.2 0.0049 17.4 0.4 2.1 1 1 1 2 2 2 1 SlyX Rabaptin PF03528.15 ORF106358 - 0.0037 16.0 4.1 0.0042 15.9 4.1 1.1 1 0 0 1 1 1 1 Rabaptin CEP209_CC5 PF16574.5 ORF106358 - 0.0073 16.5 7.3 0.0096 16.1 7.3 1.3 1 0 0 1 1 1 1 Coiled-coil region of centrosome protein CE290 Fib_alpha PF08702.10 ORF106358 - 0.0075 16.5 8.0 0.032 14.4 8.0 1.9 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family FPP PF05911.11 ORF106358 - 0.011 14.0 8.0 0.012 13.9 8.0 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil ATG16 PF08614.11 ORF106358 - 0.019 15.2 5.4 0.057 13.6 5.6 1.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Spc7 PF08317.11 ORF106358 - 0.034 13.0 8.3 0.038 12.9 8.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF724 PF05266.14 ORF106358 - 0.045 13.6 7.9 0.053 13.4 7.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 ORF106358 - 0.046 13.8 8.2 0.052 13.6 8.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 ORF106358 - 0.056 14.0 7.3 0.076 13.6 7.3 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF4094 PF13334.6 ORF106358 - 0.061 13.7 1.8 0.077 13.4 1.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) DUF4407 PF14362.6 ORF106358 - 0.069 12.5 1.7 0.077 12.3 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) BRE1 PF08647.11 ORF106358 - 0.073 13.2 10.7 0.1 12.7 10.7 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase TBCA PF02970.16 ORF106358 - 0.075 13.4 9.4 0.73 10.2 9.4 2.1 1 1 0 1 1 1 0 Tubulin binding cofactor A Cep57_CLD_2 PF14197.6 ORF106358 - 0.089 12.9 0.6 0.089 12.9 0.6 2.1 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 HIP1_clath_bdg PF16515.5 ORF106358 - 0.11 13.1 5.0 0.15 12.7 5.0 1.3 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ADIP PF11559.8 ORF106358 - 0.12 12.5 8.0 0.15 12.1 8.0 1.3 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding Exonuc_VII_L PF02601.15 ORF106358 - 0.12 12.0 4.2 0.13 11.8 4.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit EHN PF06441.12 ORF106358 - 0.14 12.6 1.9 0.52 10.7 1.9 1.9 1 1 0 1 1 1 0 Epoxide hydrolase N terminus Phage_GP20 PF06810.11 ORF106358 - 0.14 11.9 9.2 0.17 11.7 9.2 1.1 1 0 0 1 1 1 0 Phage minor structural protein GP20 HemX PF04375.14 ORF106358 - 0.16 11.2 4.2 0.17 11.1 4.2 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3837 PF12939.7 ORF106358 - 0.21 12.0 9.1 0.068 13.6 2.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3837) DUF16 PF01519.16 ORF106358 - 0.27 11.8 7.8 0.48 10.9 7.9 1.4 1 1 0 1 1 1 0 Protein of unknown function DUF16 OrfB_IS605 PF01385.19 ORF106358 - 0.35 11.1 5.6 0.066 13.4 1.5 1.8 1 1 1 2 2 2 0 Probable transposase Med21 PF11221.8 ORF106358 - 0.36 11.1 9.8 0.87 9.8 0.7 2.1 1 1 1 2 2 2 0 Subunit 21 of Mediator complex XhlA PF10779.9 ORF106358 - 0.67 10.2 5.8 1.1 9.5 1.8 2.4 1 1 1 2 2 2 0 Haemolysin XhlA Rho_Binding PF08912.11 ORF106358 - 1.2 10.0 15.0 1.7 9.5 3.2 2.1 1 1 1 2 2 2 0 Rho Binding DivIC PF04977.15 ORF106358 - 2.3 8.0 11.4 0.38 10.6 2.3 2.2 1 1 1 2 2 2 0 Septum formation initiator TMF_DNA_bd PF12329.8 ORF106358 - 5.7 7.0 14.3 24 5.0 14.3 2.0 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding MSSP PF03940.13 ORF105927 - 0.016 14.8 5.6 0.023 14.3 5.6 1.2 1 0 0 1 1 1 0 Male specific sperm protein PH_11 PF15413.6 ORF105893 - 0.067 13.6 0.2 0.083 13.3 0.2 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain EF-hand_1 PF00036.32 ORF10550 - 4.8e-22 75.8 7.4 1.9e-07 30.1 2.2 3.2 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF10550 - 1.1e-18 67.4 6.4 3.8e-14 52.9 4.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF10550 - 2.4e-18 64.4 4.6 4.7e-07 29.2 0.1 3.4 2 1 2 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 ORF10550 - 4.8e-15 54.3 2.9 3.7e-06 26.2 0.0 3.4 3 1 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF10550 - 5.4e-15 55.0 8.1 1.2e-07 31.5 1.9 3.1 1 1 2 3 3 3 3 EF-hand domain pair Caleosin PF05042.13 ORF10550 - 3.8e-05 23.7 0.9 0.34 10.8 0.1 2.8 2 1 1 3 3 3 2 Caleosin related protein EF-hand_9 PF14658.6 ORF10550 - 0.0006 20.1 0.2 0.0011 19.2 0.2 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_11 PF08976.11 ORF10550 - 0.0016 19.2 0.1 0.0031 18.4 0.1 1.4 1 1 1 2 2 2 1 EF-hand domain EF-hand_4 PF12763.7 ORF10550 - 0.0023 17.8 2.7 0.038 13.9 1.3 2.6 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF10550 - 0.012 15.9 0.7 0.032 14.6 0.3 1.7 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF10550 - 0.046 12.3 0.1 0.054 12.0 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EFhand_Ca_insen PF08726.10 ORF10550 - 0.15 12.2 1.3 1.5 9.0 0.3 2.3 1 1 1 2 2 2 0 Ca2+ insensitive EF hand DUF3719 PF12516.8 ORF105064 - 0.24 11.2 1.5 0.24 11.1 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3719) FDX-ACB PF03147.14 ORF105057 - 0.061 13.7 0.1 0.078 13.4 0.1 1.2 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain RPAP1_N PF08621.10 ORF105057 - 0.083 12.7 3.9 0.66 9.8 1.7 2.2 1 1 1 2 2 2 0 RPAP1-like, N-terminal DUF4345 PF14248.6 ORF10477 - 0.034 14.1 0.4 0.04 13.8 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4345) Wzy_C PF04932.15 ORF10477 - 0.092 12.4 0.5 0.096 12.3 0.5 1.1 1 0 0 1 1 1 0 O-Antigen ligase TraL PF07178.11 ORF10477 - 2.8 8.5 4.9 5.7 7.5 0.8 2.1 1 1 1 2 2 2 0 TraL protein PAP_fibrillin PF04755.12 ORF104295 - 1.6e-09 38.0 0.0 1.8e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 PAP_fibrillin Ank_4 PF13637.6 ORF104256 - 6.3e-18 64.9 0.2 1.4e-10 41.5 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF104256 - 2.3e-17 63.3 0.7 1.3e-16 61.0 0.6 1.8 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF104256 - 6.9e-14 50.6 0.0 0.0016 18.8 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF104256 - 4.2e-12 45.9 0.1 0.0026 18.1 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF104256 - 6.6e-11 42.2 0.7 7.7e-06 26.1 0.0 2.5 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Reovirus_L2 PF06016.11 ORF104026 - 0.13 9.4 1.6 0.14 9.3 1.6 1.0 1 0 0 1 1 1 0 Reovirus core-spike protein lambda-2 (L2) Slu7 PF11708.8 ORF103782 - 1.2e-21 77.7 5.2 1.3e-21 77.6 5.2 1.0 1 0 0 1 1 1 1 Pre-mRNA splicing Prp18-interacting factor UMPH-1 PF05822.12 ORF103782 - 0.066 12.7 1.4 0.072 12.6 1.4 1.0 1 0 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) TM231 PF10149.9 ORF103782 - 0.15 11.4 0.6 0.18 11.1 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 O-antigen_lig PF13425.6 ORF103782 - 0.44 9.3 1.4 0.4 9.4 1.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein CSN7a_helixI PF18392.1 ORF103782 - 3.7 7.5 5.6 0.78 9.7 1.6 1.9 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain MORN PF02493.20 ORF10368 - 7.1e-21 72.8 38.5 1.7e-06 27.6 4.7 4.6 5 0 0 5 5 5 4 MORN repeat Tudor_2 PF18104.1 ORF10368 - 0.79 9.5 7.1 1.5 8.6 0.2 2.9 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain ICAM_N PF03921.14 ORF103414 - 0.15 11.8 5.4 0.32 10.7 0.0 2.2 1 1 0 2 2 2 0 Intercellular adhesion molecule (ICAM), N-terminal domain ETF_alpha PF00766.19 ORF103355 - 6.4e-20 71.0 0.1 9e-20 70.5 0.1 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain DUF1382 PF07131.11 ORF102818 - 0.19 11.8 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1382) DUF5592 PF17332.2 ORF101321 - 0.019 15.5 1.4 0.22 12.1 0.7 2.1 1 1 0 2 2 2 0 Family of unknown function (DUF5592) 7TM_GPCR_Sru PF10322.9 ORF101284 - 0.005 16.2 8.4 0.0059 16.0 8.4 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Sru XK-related PF09815.9 ORF101284 - 0.01 15.0 3.7 0.012 14.7 3.7 1.0 1 0 0 1 1 1 0 XK-related protein DHHC PF01529.20 ORF101284 - 0.19 11.9 9.0 0.39 10.8 9.0 1.5 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF1656 PF07869.12 ORF100866 - 0.037 14.0 0.4 0.069 13.2 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1656) 2-Hacid_dh_C PF02826.19 ORF100469 - 3.1e-22 78.8 0.0 3.7e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Phostensin_N PF13916.6 ORF10024 - 0.11 12.9 0.3 0.24 11.8 0.3 1.7 1 1 0 1 1 1 0 PP1-regulatory protein, Phostensin N-terminal DUF5313 PF17240.2 NODE_56972_length_298_cov_0.870722_g49034_i0forward_frame_1 - 0.096 13.1 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5313) DUF587 PF04532.12 NODE_56970_length_298_cov_1.205323_g49032_i0forward_frame_1 - 0.12 11.6 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF587) DUF5090 PF17009.5 NODE_56965_length_298_cov_1.433460_g49027_i0reverse_frame_1 - 9.1 6.2 10.6 19 5.2 10.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5090) EspA PF03433.13 NODE_56959_length_298_cov_1.482890_g49021_i0reverse_frame_1 - 0.062 13.1 1.5 0.079 12.8 1.5 1.0 1 0 0 1 1 1 0 EspA-like secreted protein XhlA PF10779.9 NODE_56959_length_298_cov_1.482890_g49021_i0reverse_frame_1 - 0.42 10.8 1.7 0.65 10.3 1.7 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Nod1 PF17114.5 NODE_56950_length_298_cov_1.726236_g49012_i0forward_frame_1 - 0.0078 16.4 0.7 0.0086 16.2 0.7 1.1 1 0 0 1 1 1 1 Gef2-related medial cortical node protein Nod1 zf-H3C2 PF16721.5 NODE_56950_length_298_cov_1.726236_g49012_i0forward_frame_1 - 0.019 15.3 0.9 0.032 14.6 0.9 1.5 1 1 0 1 1 1 0 Zinc-finger like, probable DNA-binding PhoLip_ATPase_N PF16209.5 NODE_56949_length_298_cov_1.730038_g49011_i0reverse_frame_1 - 0.18 11.5 3.3 0.28 10.9 3.3 1.3 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal p25-alpha PF05517.12 NODE_56936_length_298_cov_2.076046_g48998_i0forward_frame_1 - 0.005 17.0 0.1 0.014 15.6 0.0 1.7 2 0 0 2 2 2 1 p25-alpha EF-hand_6 PF13405.6 NODE_56936_length_298_cov_2.076046_g48998_i0forward_frame_1 - 0.037 14.0 0.4 0.31 11.1 0.0 2.3 2 0 0 2 2 2 0 EF-hand domain Phage_C PF12025.8 NODE_56935_length_298_cov_2.079848_g48997_i0forward_frame_1 - 0.035 14.0 0.1 0.07 13.0 0.1 1.5 1 1 0 1 1 1 0 Phage protein C Transp_cyt_pur PF02133.15 NODE_56920_length_298_cov_2.528517_g48982_i0reverse_frame_1 - 7.8e-32 110.6 15.9 8.4e-32 110.5 15.9 1.0 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin MutS_V PF00488.21 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 3.5e-06 27.2 0.1 5.4e-06 26.6 0.1 1.3 1 0 0 1 1 1 1 MutS domain V AAA_23 PF13476.6 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 0.02 15.4 0.2 0.031 14.8 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 0.025 14.3 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_27 PF13514.6 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 0.031 13.9 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain MutS_III PF05192.18 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 0.14 12.3 0.2 0.24 11.6 0.2 1.3 1 0 0 1 1 1 0 MutS domain III Cas6 PF09559.10 NODE_56916_length_298_cov_2.722433_g48978_i0reverse_frame_1 - 0.044 13.7 0.2 0.046 13.7 0.2 1.0 1 0 0 1 1 1 0 Cas6 Crispr TetR_C_33 PF13305.6 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_1 - 0.14 12.9 0.0 0.17 12.6 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Cyclin_N PF00134.23 NODE_56911_length_298_cov_3.178707_g48973_i0forward_frame_1 - 9.4e-07 28.6 0.1 1.4e-06 28.1 0.1 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain DUF2480 PF10652.9 NODE_56911_length_298_cov_3.178707_g48973_i0forward_frame_1 - 0.084 12.8 0.0 0.095 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2480) DUF1996 PF09362.10 NODE_56908_length_298_cov_4.391635_g48970_i0reverse_frame_1 - 0.13 12.2 0.1 0.14 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1996) LptF_LptG PF03739.14 NODE_56905_length_298_cov_12.269962_g48967_i0forward_frame_1 - 0.025 13.4 1.7 0.027 13.3 1.7 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG ABC2_membrane_3 PF12698.7 NODE_56905_length_298_cov_12.269962_g48967_i0forward_frame_1 - 3.4 6.7 5.7 4.1 6.4 5.7 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein PPR_2 PF13041.6 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 5e-07 29.8 0.0 3.1e-06 27.3 0.0 1.9 2 0 0 2 2 2 1 PPR repeat family PPR PF01535.20 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 7.2e-06 25.9 0.0 0.00026 21.0 0.0 2.2 2 0 0 2 2 2 1 PPR repeat PPR_3 PF13812.6 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 8.6e-05 22.5 0.0 0.0019 18.2 0.0 2.1 1 1 1 2 2 2 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.00016 21.3 0.0 0.001 18.7 0.0 2.1 2 0 0 2 2 2 1 PPR repeat PPR_long PF17177.4 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.0031 16.9 0.0 0.0039 16.6 0.0 1.2 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP GlnD_UR_UTase PF08335.11 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.018 15.1 0.9 0.023 14.8 0.9 1.1 1 0 0 1 1 1 0 GlnD PII-uridylyltransferase Acyl-CoA_dh_N PF02771.16 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.097 13.3 0.1 18 6.0 0.0 2.1 1 1 1 2 2 2 0 Acyl-CoA dehydrogenase, N-terminal domain TPR_14 PF13428.6 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.1 13.5 2.0 0.44 11.5 0.3 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat ECSIT PF06239.11 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.14 11.3 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Evolutionarily conserved signalling intermediate in Toll pathway DUF4769 PF15992.5 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_1 - 0.011 15.5 3.8 0.013 15.3 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) DUF5316 PF17247.2 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_1 - 0.045 13.8 0.1 4.8 7.3 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5316) HAP2-GCS1 PF10699.9 NODE_56893_length_298_cov_55.346008_g48955_i0forward_frame_1 - 0.018 15.0 3.5 0.23 11.5 0.7 2.4 2 0 0 2 2 2 0 Male gamete fusion factor TMEM65 PF10507.9 NODE_56893_length_298_cov_55.346008_g48955_i0forward_frame_1 - 0.082 12.9 0.0 0.094 12.7 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 65 DUF4093 PF13331.6 NODE_56888_length_298_cov_66.349810_g48950_i0reverse_frame_1 - 0.016 15.6 0.0 0.021 15.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) DUF4013 PF13197.6 NODE_56873_length_298_cov_85.615970_g48935_i0reverse_frame_1 - 0.083 12.7 0.3 0.14 12.0 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) DUF5474 PF17568.2 NODE_56872_length_298_cov_85.798479_g48934_i0reverse_frame_1 - 0.004 17.2 0.2 0.0055 16.7 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5474) TPR_2 PF07719.17 NODE_56866_length_298_cov_103.148289_g48928_i0reverse_frame_1 - 0.044 13.9 1.6 0.1 12.8 0.1 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_56866_length_298_cov_103.148289_g48928_i0reverse_frame_1 - 0.075 13.3 0.4 0.14 12.4 0.4 1.4 1 1 0 1 1 1 0 Tetratricopeptide repeat GSH_synth_ATP PF03917.17 NODE_56861_length_298_cov_128.927757_g48923_i0reverse_frame_1 - 0.0038 16.0 0.3 0.0041 15.9 0.3 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Ribonuc_2-5A PF06479.12 NODE_56860_length_298_cov_164.600760_g48922_i0reverse_frame_1 - 0.022 14.9 1.0 0.025 14.7 1.0 1.2 1 0 0 1 1 1 0 Ribonuclease 2-5A Arm-DNA-bind_3 PF13356.6 NODE_56858_length_298_cov_182.673004_g48920_i0reverse_frame_1 - 0.09 13.2 0.1 0.1 13.0 0.1 1.2 1 0 0 1 1 1 0 Arm DNA-binding domain DUF3463 PF11946.8 NODE_56853_length_298_cov_284.429658_g48915_i0reverse_frame_1 - 0.075 12.8 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) Fer2 PF00111.27 NODE_56850_length_298_cov_5469.707224_g48912_i0reverse_frame_1 - 1.9e-05 24.5 0.1 3e-05 23.9 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FYVE_2 PF02318.16 NODE_56850_length_298_cov_5469.707224_g48912_i0reverse_frame_1 - 0.12 12.6 0.9 1.5 9.1 1.0 2.0 1 1 0 1 1 1 0 FYVE-type zinc finger DUF4187 PF13821.6 NODE_56850_length_298_cov_5469.707224_g48912_i0reverse_frame_1 - 4.5 7.1 6.9 5.5 6.8 3.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4187) zf-met PF12874.7 NODE_56848_length_298_cov_20606.045627_g48910_i0forward_frame_1 - 0.19 12.2 2.1 8.5 6.9 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type AGTRAP PF06396.11 NODE_56846_length_299_cov_0.965909_g48908_i0reverse_frame_1 - 0.042 13.6 0.1 0.047 13.5 0.1 1.1 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) ABC2_membrane_3 PF12698.7 NODE_56846_length_299_cov_0.965909_g48908_i0forward_frame_1 - 4.1e-10 39.3 2.4 4.5e-10 39.2 2.4 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein RseC_MucC PF04246.12 NODE_56846_length_299_cov_0.965909_g48908_i0forward_frame_1 - 0.3 11.0 1.3 9 6.3 0.0 2.0 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Usg PF06233.12 NODE_56844_length_299_cov_1.181818_g48906_i0reverse_frame_1 - 0.098 12.8 0.0 0.24 11.6 0.0 1.7 1 1 1 2 2 2 0 Usg-like family DUF2345 PF10106.9 NODE_56844_length_299_cov_1.181818_g48906_i0forward_frame_1 - 0.093 12.6 0.2 0.11 12.4 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2345) UPF0449 PF15136.6 NODE_56844_length_299_cov_1.181818_g48906_i0forward_frame_1 - 0.21 12.1 2.1 0.28 11.7 2.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 RNA_pol_RpbG PF16992.5 NODE_56835_length_299_cov_1.446970_g48897_i0forward_frame_1 - 0.051 13.6 0.0 0.053 13.6 0.0 1.3 1 1 0 1 1 1 0 DNA-directed RNA polymerase, subunit G DUF5489 PF17592.2 NODE_56824_length_299_cov_1.848485_g48886_i0forward_frame_1 - 0.12 12.9 3.2 0.065 13.8 1.4 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5489) IL17 PF06083.11 NODE_56822_length_299_cov_1.928030_g48884_i0forward_frame_1 - 0.028 14.9 0.1 0.036 14.5 0.1 1.2 1 0 0 1 1 1 0 Interleukin-17 DUF2953 PF11167.8 NODE_56810_length_299_cov_2.268939_g48872_i0forward_frame_1 - 0.099 12.7 0.2 0.14 12.2 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2953) C-C_Bond_Lyase PF15617.6 NODE_56808_length_299_cov_2.340909_g48870_i0reverse_frame_1 - 0.049 12.8 0.1 0.057 12.6 0.1 1.0 1 0 0 1 1 1 0 C-C_Bond_Lyase of the TIM-Barrel fold SPAN-X PF07458.12 NODE_56807_length_299_cov_2.359848_g48869_i0reverse_frame_1 - 0.12 12.8 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Sperm protein associated with nucleus, mapped to X chromosome DUF1689 PF07954.11 NODE_56803_length_299_cov_2.640152_g48865_i0reverse_frame_1 - 0.029 14.8 1.2 0.033 14.6 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1689) RF-1 PF00472.20 NODE_56803_length_299_cov_2.640152_g48865_i0reverse_frame_1 - 0.063 13.2 3.7 0.085 12.8 3.7 1.2 1 0 0 1 1 1 0 RF-1 domain DUF3701 PF12482.8 NODE_56802_length_299_cov_2.659091_g48864_i0forward_frame_1 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Phage integrase protein DUF3251 PF11622.8 NODE_56793_length_299_cov_3.458333_g48855_i0reverse_frame_1 - 0.032 13.9 0.7 0.039 13.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3251) Allexi_40kDa PF05549.11 NODE_56793_length_299_cov_3.458333_g48855_i0reverse_frame_1 - 0.1 12.1 0.5 0.11 12.0 0.5 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein TMF_DNA_bd PF12329.8 NODE_56793_length_299_cov_3.458333_g48855_i0reverse_frame_1 - 0.16 12.0 4.9 0.24 11.4 4.9 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding GPS2_interact PF15784.5 NODE_56793_length_299_cov_3.458333_g48855_i0reverse_frame_1 - 2.4 8.6 7.4 1.1 9.7 0.2 2.2 1 1 1 2 2 2 0 G-protein pathway suppressor 2-interacting domain UNC119_bdg PF15435.6 NODE_56791_length_299_cov_3.893939_g48853_i0reverse_frame_1 - 0.035 13.6 0.0 0.039 13.5 0.0 1.0 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue DUF2457 PF10446.9 NODE_56784_length_299_cov_45.871212_g48846_i0reverse_frame_1 - 0.36 9.9 5.7 0.4 9.8 5.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) TMPIT PF07851.13 NODE_56779_length_299_cov_57.750000_g48841_i0reverse_frame_1 - 0.04 13.2 1.9 0.044 13.0 1.9 1.2 1 0 0 1 1 1 0 TMPIT-like protein Endothelin PF00322.17 NODE_56779_length_299_cov_57.750000_g48841_i0forward_frame_1 - 0.046 13.3 0.5 0.082 12.5 0.5 1.4 1 0 0 1 1 1 0 Endothelin family ABC2_membrane_3 PF12698.7 NODE_56769_length_299_cov_70.795455_g48831_i0reverse_frame_1 - 0.4 9.7 2.1 0.48 9.5 2.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Tcp10_C PF07202.13 NODE_56764_length_299_cov_76.314394_g48826_i0reverse_frame_1 - 2.5e-06 27.6 0.2 2.9e-06 27.4 0.2 1.1 1 0 0 1 1 1 1 T-complex protein 10 C-terminus DUF3895 PF13034.6 NODE_56764_length_299_cov_76.314394_g48826_i0reverse_frame_1 - 0.077 13.0 1.1 0.12 12.4 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3895) Paired_CXXCH_1 PF09699.10 NODE_56752_length_299_cov_155.363636_g48814_i0forward_frame_1 - 0.0048 16.6 0.2 0.01 15.6 0.2 1.5 1 0 0 1 1 1 1 Doubled CXXCH motif (Paired_CXXCH_1) Lem_TRP PF08262.11 NODE_56745_length_299_cov_2973.776515_g48807_i0forward_frame_1 - 3.6 7.8 5.4 74 3.7 0.4 4.1 4 0 0 4 4 4 0 Leucophaea maderae tachykinin-related peptide Cdc13_OB2 PF18691.1 NODE_56741_length_300_cov_0.973585_g48803_i0forward_frame_1 - 0.039 14.0 0.5 1.5 8.9 0.1 2.0 2 0 0 2 2 2 0 Cell division control protein 13, OB2 domain DUF4106 PF13388.6 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_1 - 2.8 7.1 4.5 3.2 6.9 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) DUF4716 PF15837.5 NODE_56727_length_300_cov_1.573585_g48789_i0forward_frame_1 - 0.23 11.6 1.8 0.26 11.4 0.9 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) Oxidored_q5_N PF01059.17 NODE_56724_length_300_cov_1.622642_g48786_i0reverse_frame_1 - 0.094 12.8 0.3 0.14 12.3 0.3 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus KASH_CCD PF14662.6 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.0039 17.1 5.8 0.0046 16.8 5.8 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH APG6_N PF17675.1 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.0044 17.5 4.1 0.0049 17.4 4.1 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region CENP-F_N PF10481.9 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.0046 16.6 5.1 0.087 12.5 1.4 2.1 1 1 1 2 2 2 2 Cenp-F N-terminal domain Troponin PF00992.20 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.008 16.5 6.7 0.01 16.1 6.7 1.1 1 0 0 1 1 1 1 Troponin DUF3450 PF11932.8 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.027 13.8 3.1 0.028 13.7 3.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) bZIP_1 PF00170.21 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.037 14.1 9.5 0.04 14.0 8.1 1.8 1 1 1 2 2 2 0 bZIP transcription factor HALZ PF02183.18 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.074 13.3 8.6 3.1 8.1 2.8 2.5 1 1 1 2 2 2 0 Homeobox associated leucine zipper DivIC PF04977.15 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.094 12.5 7.7 0.28 11.0 2.5 2.3 1 1 1 2 2 2 0 Septum formation initiator FlxA PF14282.6 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.27 11.2 4.4 0.34 10.9 4.2 1.4 1 1 0 1 1 1 0 FlxA-like protein GIT_CC PF16559.5 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.28 11.1 7.3 0.24 11.3 2.4 2.1 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor YabA PF06156.13 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.37 11.4 6.4 0.7 10.6 6.4 1.5 1 1 0 1 1 1 0 Initiation control protein YabA DUF724 PF05266.14 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.4 10.5 5.2 0.45 10.3 5.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) FtsL PF04999.13 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.54 10.3 5.3 1.2 9.2 2.3 2.1 1 1 1 2 2 2 0 Cell division protein FtsL M PF02370.16 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 5.3 7.9 9.1 0.78 10.5 1.0 3.1 3 1 0 3 3 2 0 M protein repeat cNMP_binding PF00027.29 NODE_56713_length_300_cov_1.954717_g48775_i0forward_frame_1 - 1.1e-17 63.9 0.0 1.3e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain rve PF00665.26 NODE_56710_length_300_cov_2.003774_g48772_i0reverse_frame_1 - 8.5e-05 22.7 0.0 0.0001 22.5 0.0 1.1 1 0 0 1 1 1 1 Integrase core domain ecTbetaR2 PF08917.10 NODE_56710_length_300_cov_2.003774_g48772_i0reverse_frame_1 - 0.049 13.6 0.1 0.061 13.3 0.1 1.2 1 0 0 1 1 1 0 Transforming growth factor beta receptor 2 ectodomain DUF3346 PF11826.8 NODE_56701_length_300_cov_2.237736_g48763_i0reverse_frame_1 - 0.043 13.6 0.1 0.057 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) Cucumo_2B PF03263.13 NODE_56697_length_300_cov_2.460377_g48759_i0reverse_frame_1 - 0.13 12.7 0.2 0.27 11.7 0.1 1.6 1 1 1 2 2 2 0 Cucumovirus protein 2B 2TM PF13239.6 NODE_56694_length_300_cov_2.524528_g48756_i0forward_frame_1 - 0.13 12.6 6.3 0.23 11.8 6.3 1.4 1 0 0 1 1 1 0 2TM domain Dec-1 PF04624.14 NODE_56692_length_300_cov_2.577358_g48754_i0forward_frame_1 - 5.5 6.9 5.5 19 5.2 0.2 2.2 2 0 0 2 2 2 0 Dec-1 repeat PagP PF07017.11 NODE_56690_length_300_cov_2.683019_g48752_i0reverse_frame_1 - 3e-21 75.3 0.6 3.9e-21 75.0 0.6 1.1 1 0 0 1 1 1 1 Antimicrobial peptide resistance and lipid A acylation protein PagP DUF4131 PF13567.6 NODE_56689_length_300_cov_2.754717_g48751_i0forward_frame_1 - 0.021 14.5 7.0 0.022 14.4 7.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Wzy_C PF04932.15 NODE_56689_length_300_cov_2.754717_g48751_i0forward_frame_1 - 0.096 12.3 1.3 0.1 12.2 1.3 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF4307 PF14155.6 NODE_56689_length_300_cov_2.754717_g48751_i0forward_frame_1 - 0.15 11.9 0.2 0.28 11.0 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4307) Glucos_trans_II PF14264.6 NODE_56689_length_300_cov_2.754717_g48751_i0forward_frame_1 - 1.2 8.4 7.6 1.4 8.2 7.6 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII UPF0515 PF15135.6 NODE_56683_length_300_cov_3.011321_g48745_i0reverse_frame_1 - 1.9 7.7 8.8 2.2 7.6 8.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 WASH-7_mid PF14744.6 NODE_56681_length_300_cov_3.105660_g48743_i0reverse_frame_1 - 7.9e-11 41.6 0.2 9e-11 41.4 0.2 1.0 1 0 0 1 1 1 1 WASH complex subunit 7 DUF327 PF03885.13 NODE_56681_length_300_cov_3.105660_g48743_i0reverse_frame_1 - 0.072 13.1 0.3 9.6 6.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF327) ECD PF18432.1 NODE_56680_length_300_cov_3.222642_g48742_i0forward_frame_1 - 0.083 12.9 0.4 1.4 9.0 0.2 2.0 1 1 1 2 2 2 0 Extracellular Cadherin domain MOZART2 PF12926.7 NODE_56680_length_300_cov_3.222642_g48742_i0forward_frame_1 - 0.093 12.4 1.5 0.14 11.8 0.6 1.8 1 1 1 2 2 2 0 Mitotic-spindle organizing gamma-tubulin ring associated Cwf_Cwc_15 PF04889.12 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 0.0021 17.8 11.0 0.0026 17.6 11.0 1.1 1 0 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein PRMT5 PF05185.16 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 0.015 15.2 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase TDA11 PF17084.5 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 0.083 11.8 4.5 0.089 11.7 4.5 1.1 1 0 0 1 1 1 0 Topoisomerase I damage affected protein 11 PRP1_N PF06424.12 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 0.09 13.2 7.0 0.1 13.0 7.0 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal TCTP PF00838.17 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 1.2 9.4 8.2 1.5 9.1 8.2 1.1 1 0 0 1 1 1 0 Translationally controlled tumour protein RR_TM4-6 PF06459.12 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 1.8 8.3 9.7 2 8.2 9.7 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CEBP_ZZ PF16366.5 NODE_56659_length_300_cov_57.762264_g48721_i0reverse_frame_1 - 0.51 10.6 4.6 11 6.3 0.0 2.3 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Peptidase_S49 PF01343.18 NODE_56659_length_300_cov_57.762264_g48721_i0forward_frame_1 - 0.029 14.3 0.4 0.036 14.0 0.4 1.1 1 0 0 1 1 1 0 Peptidase family S49 Phage_TAC_5 PF08890.11 NODE_56654_length_300_cov_65.256604_g48716_i0reverse_frame_1 - 0.17 11.9 8.7 0.051 13.6 5.9 1.6 1 1 0 1 1 1 0 Phage XkdN-like tail assembly chaperone protein, TAC FAM76 PF16046.5 NODE_56654_length_300_cov_65.256604_g48716_i0reverse_frame_1 - 0.22 10.9 8.5 0.043 13.2 5.4 1.4 1 1 0 1 1 1 0 FAM76 protein Sas10 PF09368.10 NODE_56648_length_300_cov_77.362264_g48710_i0reverse_frame_1 - 0.0014 19.1 0.0 0.0014 19.1 0.0 2.1 2 1 0 2 2 2 1 Sas10 C-terminal domain DUF3593 PF12159.8 NODE_56648_length_300_cov_77.362264_g48710_i0forward_frame_1 - 0.042 13.9 0.1 0.055 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3593) TRAM_LAG1_CLN8 PF03798.16 NODE_56637_length_300_cov_144.626415_g48699_i0reverse_frame_1 - 0.0011 18.7 0.6 0.0012 18.6 0.6 1.1 1 0 0 1 1 1 1 TLC domain TAP35_44 PF07265.11 NODE_56627_length_300_cov_341.203774_g48689_i0forward_frame_1 - 0.096 12.7 0.2 0.11 12.5 0.2 1.1 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 Fer2 PF00111.27 NODE_56620_length_300_cov_6264.596226_g48682_i0reverse_frame_1 - 1.8e-05 24.6 0.1 3e-05 23.9 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain UPF0047 PF01894.17 NODE_56620_length_300_cov_6264.596226_g48682_i0reverse_frame_1 - 0.058 13.5 0.0 0.064 13.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0047 DUF2155 PF09923.9 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_1 - 0.21 11.9 0.1 13 6.1 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2155) CHASE PF03924.13 NODE_56616_length_301_cov_1.037594_g48678_i0reverse_frame_3 - 0.026 14.5 0.0 0.039 13.9 0.0 1.3 1 0 0 1 1 1 0 CHASE domain DUF5558 PF17713.1 NODE_56616_length_301_cov_1.037594_g48678_i0forward_frame_2 - 0.033 14.6 2.8 0.039 14.3 2.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5558) AGS_C PF18134.1 NODE_56614_length_301_cov_1.187970_g48676_i0reverse_frame_2 - 0.043 13.8 0.0 0.048 13.7 0.0 1.1 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain GCS PF03074.16 NODE_56612_length_301_cov_1.203008_g48674_i0forward_frame_3 - 1.2e-22 80.8 0.4 1.3e-22 80.7 0.4 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase C2 PF00168.30 NODE_56610_length_301_cov_1.349624_g48672_i0reverse_frame_3 - 1.2e-17 64.1 0.0 1.4e-17 63.9 0.0 1.0 1 0 0 1 1 1 1 C2 domain baeRF_family7 PF18849.1 NODE_56608_length_301_cov_1.406015_g48670_i0reverse_frame_3 - 0.054 13.7 0.1 0.062 13.5 0.1 1.1 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 7 ubiquitin PF00240.23 NODE_56606_length_301_cov_1.443609_g48668_i0forward_frame_2 - 0.00028 20.6 0.0 0.00044 19.9 0.0 1.3 1 1 0 1 1 1 1 Ubiquitin family YukD PF08817.10 NODE_56606_length_301_cov_1.443609_g48668_i0forward_frame_2 - 0.00091 19.9 0.0 0.0011 19.6 0.0 1.2 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD AbrB PF05145.12 NODE_56604_length_301_cov_1.533835_g48666_i0reverse_frame_2 - 0.064 12.2 0.1 0.078 11.9 0.1 1.1 1 0 0 1 1 1 0 Transition state regulatory protein AbrB Securin PF04856.13 NODE_56602_length_301_cov_1.605263_g48664_i0forward_frame_3 - 0.11 12.4 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Securin sister-chromatid separation inhibitor TylF PF05711.11 NODE_56599_length_301_cov_1.703008_g48661_i0reverse_frame_2 - 0.085 12.1 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) OAD_gamma PF04277.13 NODE_56599_length_301_cov_1.703008_g48661_i0forward_frame_2 - 1.3 9.7 6.1 2 9.0 6.1 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain FerA PF08165.11 NODE_56598_length_301_cov_1.751880_g48660_i0forward_frame_2 - 0.069 13.1 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 FerA (NUC095) domain R3H-assoc PF13902.6 NODE_56592_length_301_cov_1.857143_g48654_i0forward_frame_3 - 0.022 15.2 0.1 0.024 15.0 0.1 1.2 1 0 0 1 1 1 0 R3H-associated N-terminal domain FadR_C PF07840.12 NODE_56592_length_301_cov_1.857143_g48654_i0forward_frame_3 - 0.13 12.2 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 FadR C-terminal domain Ca_bind_SSO6904 PF18249.1 NODE_56589_length_301_cov_1.947368_g48651_i0forward_frame_3 - 0.074 13.4 3.1 0.15 12.4 0.6 2.0 1 1 1 2 2 2 0 Calcium binding protein SSO6904 DUF2785 PF10978.8 NODE_56589_length_301_cov_1.947368_g48651_i0forward_frame_3 - 0.085 12.6 0.0 0.099 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2785) zf-Sec23_Sec24 PF04810.15 NODE_56589_length_301_cov_1.947368_g48651_i0forward_frame_2 - 0.075 13.1 0.5 0.12 12.5 0.5 1.3 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger NDUF_B7 PF05676.13 NODE_56585_length_301_cov_2.060150_g48647_i0reverse_frame_2 - 0.033 13.9 2.6 0.05 13.3 2.6 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Z1 PF10593.9 NODE_56576_length_301_cov_2.368421_g48638_i0reverse_frame_3 - 0.49 9.8 7.8 0.55 9.7 7.8 1.0 1 0 0 1 1 1 0 Z1 domain Tristanin_u2 PF16638.5 NODE_56576_length_301_cov_2.368421_g48638_i0reverse_frame_3 - 0.67 10.8 6.0 0.83 10.5 6.0 1.1 1 0 0 1 1 1 0 Unstructured region on methyltransferase between zinc-fingers DUF5040 PF16443.5 NODE_56574_length_301_cov_2.466165_g48636_i0reverse_frame_2 - 0.056 12.8 0.1 0.059 12.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5040) UCH_1 PF13423.6 NODE_56574_length_301_cov_2.466165_g48636_i0forward_frame_3 - 0.043 13.4 0.2 0.045 13.3 0.2 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase zf-LITAF-like PF10601.9 NODE_56574_length_301_cov_2.466165_g48636_i0forward_frame_3 - 0.045 14.0 0.9 0.045 14.0 0.9 1.6 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Atypical_Card PF18461.1 NODE_56573_length_301_cov_2.469925_g48635_i0forward_frame_3 - 0.082 13.1 0.4 0.11 12.8 0.4 1.1 1 0 0 1 1 1 0 Atypical caspase recruitment domain TauE PF01925.19 NODE_56572_length_301_cov_2.563910_g48634_i0reverse_frame_2 - 0.0046 16.6 2.4 0.0054 16.4 2.4 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE AC_N PF16214.5 NODE_56572_length_301_cov_2.563910_g48634_i0reverse_frame_2 - 1.3 8.1 3.6 1.5 7.9 3.6 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region cNMP_binding PF00027.29 NODE_56569_length_301_cov_2.631579_g48631_i0reverse_frame_2 - 2.9e-06 27.2 0.0 7e-06 26.0 0.0 1.6 1 1 1 2 2 2 1 Cyclic nucleotide-binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks236.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks236.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks236.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks236.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:05:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Inhibitor_I69 PF13734.6 NODE_56565_length_301_cov_2.714286_g48627_i0reverse_frame_3 - 0.053 13.9 0.0 0.083 13.3 0.0 1.4 1 1 0 1 1 1 0 Spi protease inhibitor Bac_luciferase PF00296.20 NODE_56563_length_301_cov_2.774436_g48625_i0forward_frame_3 - 0.011 15.2 0.0 0.018 14.5 0.0 1.4 2 0 0 2 2 2 0 Luciferase-like monooxygenase PriA_CRR PF18319.1 NODE_56562_length_301_cov_2.834586_g48624_i0reverse_frame_3 - 0.17 11.9 0.6 0.17 11.9 0.6 2.3 3 0 0 3 3 3 0 PriA DNA helicase Cys-rich region (CRR) domain zf_CCCH_4 PF18345.1 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.00026 21.0 5.6 0.00051 20.0 5.6 1.5 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.00038 21.1 0.1 0.00047 20.8 0.1 1.2 1 0 0 1 1 1 1 Torus domain zf-CCCH PF00642.24 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.00071 19.4 3.5 0.0012 18.7 3.5 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.0034 17.2 3.4 0.0055 16.5 3.4 1.4 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_3 PF15663.5 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.0082 16.4 0.2 0.014 15.6 0.2 1.3 1 0 0 1 1 1 1 Zinc-finger containing family zf-C5HC2 PF02928.16 NODE_56558_length_301_cov_3.142857_g48620_i0reverse_frame_2 - 0.038 14.4 0.5 0.051 14.0 0.5 1.3 1 0 0 1 1 1 0 C5HC2 zinc finger RVT_1 PF00078.27 NODE_56555_length_301_cov_3.541353_g48617_i0reverse_frame_3 - 0.002 17.7 0.0 0.0024 17.5 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Peptidase_S74 PF13884.6 NODE_56547_length_301_cov_23.924812_g48609_i0reverse_frame_3 - 4.1e-09 36.6 0.1 6.5e-09 36.0 0.1 1.3 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 NODE_56547_length_301_cov_23.924812_g48609_i0reverse_frame_3 - 0.012 15.1 0.4 0.098 12.2 0.0 2.3 2 0 0 2 2 2 0 Trimerisation motif UCH PF00443.29 NODE_56545_length_301_cov_26.071429_g48607_i0reverse_frame_2 - 0.021 14.3 1.6 0.022 14.3 1.6 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase PaO PF08417.12 NODE_56544_length_301_cov_30.312030_g48606_i0forward_frame_2 - 0.08 13.1 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Pheophorbide a oxygenase Cyclase_polyket PF04673.12 NODE_56540_length_301_cov_48.150376_g48602_i0reverse_frame_3 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 1 0 1 1 1 0 Polyketide synthesis cyclase Thioredoxin_12 PF18400.1 NODE_56534_length_301_cov_56.026316_g48596_i0reverse_frame_2 - 0.037 13.9 0.5 0.044 13.6 0.5 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain UCH PF00443.29 NODE_56527_length_301_cov_62.011278_g48589_i0forward_frame_2 - 1.1e-13 51.3 0.5 1.2e-13 51.2 0.5 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Ribosomal_L36e PF01158.18 NODE_56525_length_301_cov_64.894737_g48587_i0reverse_frame_2 - 1.2e-26 92.8 3.1 1.4e-26 92.6 3.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L36e Vac17 PF17321.2 NODE_56525_length_301_cov_64.894737_g48587_i0forward_frame_2 - 0.025 14.0 0.1 0.03 13.8 0.1 1.0 1 0 0 1 1 1 0 Vacuole-related protein 17 MDH PF02315.16 NODE_56523_length_301_cov_68.522556_g48585_i0reverse_frame_2 - 0.018 15.1 0.0 0.026 14.6 0.0 1.3 1 0 0 1 1 1 0 Methanol dehydrogenase beta subunit SinI PF08671.10 NODE_56521_length_301_cov_74.924812_g48583_i0forward_frame_3 - 0.048 13.5 0.1 7.4 6.5 0.0 2.6 2 0 0 2 2 2 0 Anti-repressor SinI DUF4535 PF15054.6 NODE_56521_length_301_cov_74.924812_g48583_i0forward_frame_3 - 2.5 7.9 5.5 3.4 7.5 2.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) Tht1 PF04163.12 NODE_56518_length_301_cov_81.240602_g48580_i0reverse_frame_2 - 0.024 13.4 0.8 0.023 13.5 0.8 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein DUF2726 PF10881.8 NODE_56518_length_301_cov_81.240602_g48580_i0forward_frame_3 - 0.052 13.4 0.2 0.078 12.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2726) Herpes_U59 PF04529.12 NODE_56515_length_301_cov_86.590226_g48577_i0forward_frame_3 - 0.04 13.0 0.1 0.041 12.9 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein DUF2142 PF09913.9 NODE_56514_length_301_cov_87.015038_g48576_i0reverse_frame_2 - 0.27 10.1 4.2 0.26 10.1 4.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) CH_2 PF06294.11 NODE_56514_length_301_cov_87.015038_g48576_i0forward_frame_2 - 0.00025 21.1 0.0 0.00032 20.8 0.0 1.2 1 0 0 1 1 1 1 CH-like domain in sperm protein LRRNT_2 PF08263.12 NODE_56514_length_301_cov_87.015038_g48576_i0forward_frame_2 - 0.085 13.2 0.6 0.14 12.4 0.6 1.5 1 1 0 1 1 1 0 Leucine rich repeat N-terminal domain Gp37 PF09646.10 NODE_56513_length_301_cov_87.815789_g48575_i0reverse_frame_2 - 0.044 13.6 0.0 0.058 13.2 0.0 1.1 1 0 0 1 1 1 0 Gp37 protein DUF1149 PF06619.11 NODE_56513_length_301_cov_87.815789_g48575_i0forward_frame_3 - 0.034 14.5 0.3 0.038 14.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1149) DUF1214 PF06742.11 NODE_56510_length_301_cov_93.466165_g48572_i0reverse_frame_2 - 0.051 14.0 0.1 0.057 13.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1214) Bradykinin PF06753.12 NODE_56506_length_301_cov_105.071429_g48568_i0reverse_frame_2 - 0.024 14.3 0.2 0.037 13.7 0.2 1.3 1 0 0 1 1 1 0 Bradykinin Polyhedrin PF00738.18 NODE_56504_length_301_cov_136.545113_g48566_i0reverse_frame_3 - 2.6 7.3 7.0 0.43 9.9 3.4 1.5 1 1 1 2 2 2 0 Polyhedrin Bax1-I PF01027.20 NODE_56503_length_301_cov_139.214286_g48565_i0reverse_frame_2 - 3.4e-13 49.9 14.0 3.7e-13 49.8 14.0 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 UCR_hinge PF02320.16 NODE_56499_length_301_cov_165.319549_g48561_i0reverse_frame_2 - 1.7e-10 40.9 0.2 1.7e-10 40.9 0.2 1.4 2 0 0 2 2 2 1 Ubiquinol-cytochrome C reductase hinge protein DUF5137 PF17220.3 NODE_56497_length_301_cov_208.548872_g48559_i0reverse_frame_3 - 0.33 11.8 4.1 13 6.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF5137) HMG_box PF00505.19 NODE_56492_length_301_cov_485.443609_g48554_i0reverse_frame_3 - 0.0052 17.2 0.0 0.0081 16.6 0.0 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box DUF4834 PF16118.5 NODE_56487_length_301_cov_5229.203008_g48549_i0reverse_frame_3 - 0.15 13.0 0.0 0.18 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF3493 PF11998.8 NODE_56487_length_301_cov_5229.203008_g48549_i0reverse_frame_2 - 0.11 12.7 0.3 0.11 12.7 0.3 2.0 1 1 1 2 2 2 0 Low psii accumulation1 / Rep27 TssO PF17561.2 NODE_56487_length_301_cov_5229.203008_g48549_i0reverse_frame_2 - 2.9 8.0 5.6 3.5 7.7 5.6 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO Pox_Ag35 PF03286.14 NODE_56487_length_301_cov_5229.203008_g48549_i0forward_frame_3 - 3.9 7.2 9.9 5 6.9 9.9 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein NOB1_Zn_bind PF08772.11 NODE_56487_length_301_cov_5229.203008_g48549_i0forward_frame_2 - 0.0072 16.5 2.0 0.01 16.0 2.0 1.3 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like SCFA_trans PF02667.14 NODE_56487_length_301_cov_5229.203008_g48549_i0forward_frame_2 - 0.22 10.5 0.1 0.23 10.4 0.1 1.0 1 0 0 1 1 1 0 Short chain fatty acid transporter Dickkopf_N PF04706.12 NODE_56482_length_302_cov_1.239700_g48544_i0reverse_frame_3 - 5.5 7.5 21.7 0.67 10.5 3.3 4.1 2 2 2 4 4 4 0 Dickkopf N-terminal cysteine-rich region Opy2 PF09463.10 NODE_56482_length_302_cov_1.239700_g48544_i0reverse_frame_3 - 6.2 7.2 23.9 0.77 10.1 7.1 3.7 3 2 1 4 4 4 0 Opy2 protein His_Phos_2 PF00328.22 NODE_56481_length_302_cov_1.243446_g48543_i0forward_frame_3 - 0.00078 18.9 0.0 0.00089 18.7 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Caud_tail_N PF16838.5 NODE_56481_length_302_cov_1.243446_g48543_i0forward_frame_3 - 0.066 13.6 0.1 0.071 13.5 0.1 1.2 1 0 0 1 1 1 0 Caudoviral major tail protein N-terminus Fe_hyd_SSU PF02256.17 NODE_56481_length_302_cov_1.243446_g48543_i0forward_frame_3 - 0.07 13.2 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Iron hydrogenase small subunit Chitin_synth_1 PF01644.17 NODE_56480_length_302_cov_1.303371_g48542_i0forward_frame_2 - 0.0009 19.3 0.0 0.0011 19.0 0.0 1.1 1 0 0 1 1 1 1 Chitin synthase ELMO_CED12 PF04727.13 NODE_56473_length_302_cov_1.629213_g48535_i0forward_frame_2 - 0.00053 20.1 0.4 0.00078 19.6 0.4 1.2 1 0 0 1 1 1 1 ELMO/CED-12 family Ribosomal_L27_C PF18471.1 NODE_56471_length_302_cov_1.655431_g48533_i0reverse_frame_3 - 0.0025 17.3 0.2 0.0028 17.1 0.2 1.2 1 0 0 1 1 1 1 Ribosomal L27 protein C-terminal domain L27_2 PF09045.10 NODE_56470_length_302_cov_1.685393_g48532_i0forward_frame_3 - 0.16 12.0 0.0 0.27 11.2 0.0 1.3 1 0 0 1 1 1 0 L27_2 SieB PF14163.6 NODE_56469_length_302_cov_1.700375_g48531_i0forward_frame_3 - 0.96 8.9 6.1 0.24 10.9 2.8 1.6 1 1 1 2 2 2 0 Super-infection exclusion protein B WSC PF01822.19 NODE_56465_length_302_cov_1.921348_g48527_i0forward_frame_2 - 0.08 13.1 0.2 0.12 12.5 0.2 1.2 1 0 0 1 1 1 0 WSC domain SAGA-Tad1 PF12767.7 NODE_56458_length_302_cov_2.198502_g48520_i0reverse_frame_2 - 0.067 12.9 0.1 0.067 12.9 0.1 1.1 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit Histone_HNS PF00816.21 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 2.3e-18 66.8 1.9 2.8e-18 66.5 1.9 1.2 1 0 0 1 1 1 1 H-NS histone family DUF4164 PF13747.6 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.022 15.1 3.0 0.025 14.8 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) DUF3037 PF11236.8 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.023 15.1 0.7 0.031 14.7 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3037) PaaX_C PF08223.11 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.035 14.4 0.0 0.043 14.1 0.0 1.2 1 0 0 1 1 1 0 PaaX-like protein C-terminal domain HAUS-augmin3 PF14932.6 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.038 13.6 1.0 0.042 13.4 1.0 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 TetR_C_24 PF17932.1 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.043 14.1 0.6 0.057 13.7 0.6 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain ACCA PF03255.14 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.095 12.6 1.1 0.13 12.2 1.1 1.1 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Swi5 PF07061.11 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.17 12.0 3.3 0.097 12.8 1.5 1.5 2 0 0 2 2 2 0 Swi5 PTS_2-RNA PF01885.16 NODE_56449_length_302_cov_2.602996_g48511_i0reverse_frame_3 - 6.1e-07 29.7 0.0 6.8e-07 29.5 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Axin_b-cat_bind PF08833.10 NODE_56447_length_302_cov_2.681648_g48509_i0reverse_frame_2 - 0.17 12.0 2.5 3.4 7.9 2.5 2.3 1 1 0 1 1 1 0 Axin beta-catenin binding domain AbiGi PF10899.8 NODE_56445_length_302_cov_3.617978_g48507_i0forward_frame_2 - 0.015 15.1 0.1 0.016 15.1 0.1 1.2 1 0 0 1 1 1 0 Putative abortive phage resistance protein AbiGi, antitoxin DUF456 PF04306.13 NODE_56439_length_302_cov_4.760300_g48501_i0reverse_frame_2 - 0.16 12.2 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF456) WCCH PF03716.14 NODE_56439_length_302_cov_4.760300_g48501_i0forward_frame_3 - 0.015 14.9 4.4 0.035 13.8 4.4 1.6 1 0 0 1 1 1 0 WCCH motif 3-HAO PF06052.12 NODE_56438_length_302_cov_5.842697_g48500_i0forward_frame_2 - 0.15 11.7 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 3-hydroxyanthranilic acid dioxygenase Ureide_permease PF07168.11 NODE_56436_length_302_cov_11.943820_g48498_i0forward_frame_2 - 9.7 4.8 6.8 12 4.6 6.8 1.0 1 0 0 1 1 1 0 Ureide permease zf-CCCH PF00642.24 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 3e-08 33.4 7.6 4.6e-08 32.8 7.6 1.3 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 8e-05 22.3 9.2 0.00012 21.8 9.2 1.2 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 0.00012 22.0 7.9 0.00025 21.0 7.9 1.6 1 1 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 0.00027 21.6 3.1 0.00027 21.6 3.1 1.4 1 1 0 1 1 1 1 Torus domain zf-CCCH_2 PF14608.6 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 0.019 15.4 7.7 0.033 14.7 7.7 1.4 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger MFA1_2 PF17317.2 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 0.17 11.7 0.6 0.17 11.7 0.6 1.7 2 0 0 2 2 2 0 Mating hormone A-factor 1&2 Cytochrome-c551 PF10643.9 NODE_56428_length_302_cov_40.157303_g48490_i0forward_frame_3 - 0.21 11.1 0.6 0.28 10.7 0.6 1.2 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 BAG6 PF12057.8 NODE_56426_length_302_cov_42.086142_g48488_i0reverse_frame_2 - 0.065 12.9 0.2 0.088 12.5 0.2 1.2 1 0 0 1 1 1 0 BCL2-associated athanogene 6 TPD52 PF04201.15 NODE_56426_length_302_cov_42.086142_g48488_i0forward_frame_3 - 0.087 12.4 0.2 0.098 12.3 0.2 1.1 1 0 0 1 1 1 0 Tumour protein D52 family VWA_3 PF13768.6 NODE_56423_length_302_cov_50.359551_g48485_i0reverse_frame_2 - 0.017 15.0 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 von Willebrand factor type A domain Y_phosphatase PF00102.27 NODE_56423_length_302_cov_50.359551_g48485_i0forward_frame_3 - 0.13 11.8 0.2 0.17 11.5 0.2 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase SAG PF04092.13 NODE_56422_length_302_cov_53.157303_g48484_i0forward_frame_3 - 0.016 16.0 1.8 0.02 15.7 1.8 1.0 1 0 0 1 1 1 0 SRS domain Presenilin PF01080.17 NODE_56422_length_302_cov_53.157303_g48484_i0forward_frame_3 - 2.4 6.9 5.3 2.8 6.6 5.3 1.0 1 0 0 1 1 1 0 Presenilin Lactococcin_972 PF09683.10 NODE_56421_length_302_cov_53.625468_g48483_i0reverse_frame_3 - 0.073 13.6 0.2 0.11 13.1 0.2 1.2 1 0 0 1 1 1 0 Bacteriocin (Lactococcin_972) p450 PF00067.22 NODE_56419_length_302_cov_53.913858_g48481_i0reverse_frame_2 - 2.2e-11 43.2 0.0 2.3e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 FtsH_ext PF06480.15 NODE_56419_length_302_cov_53.913858_g48481_i0forward_frame_3 - 0.054 13.9 0.6 0.08 13.3 0.6 1.3 1 0 0 1 1 1 0 FtsH Extracellular Ras PF00071.22 NODE_56414_length_302_cov_62.756554_g48476_i0forward_frame_2 - 6.3e-11 42.1 0.0 7.4e-11 41.9 0.0 1.0 1 0 0 1 1 1 1 Ras family DUF2457 PF10446.9 NODE_56409_length_302_cov_71.857678_g48471_i0reverse_frame_3 - 2 7.5 4.9 2.1 7.4 4.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) ALG3 PF05208.13 NODE_56402_length_302_cov_91.220974_g48464_i0reverse_frame_3 - 2.7e-08 33.7 4.1 3.1e-08 33.5 4.1 1.0 1 0 0 1 1 1 1 ALG3 protein PIG-Y PF15159.6 NODE_56402_length_302_cov_91.220974_g48464_i0reverse_frame_3 - 0.89 10.5 7.5 1.7 9.6 7.5 1.6 1 1 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y Pallilysin PF18663.1 NODE_56401_length_302_cov_91.318352_g48463_i0forward_frame_2 - 0.0034 17.4 1.1 0.0042 17.1 1.1 1.1 1 0 0 1 1 1 1 Pallilysin beta barrel domain Sedlin_N PF04628.13 NODE_56400_length_302_cov_96.902622_g48462_i0reverse_frame_2 - 4.9e-08 33.2 0.0 5.5e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region Rrp44_S1 PF17215.3 NODE_56396_length_302_cov_104.659176_g48458_i0forward_frame_3 - 0.071 13.1 3.0 0.083 12.9 2.7 1.3 1 1 0 1 1 1 0 S1 domain Thioredoxin PF00085.20 NODE_56385_length_302_cov_396.288390_g48447_i0reverse_frame_3 - 0.091 12.8 0.1 0.14 12.1 0.1 1.3 1 0 0 1 1 1 0 Thioredoxin ERGIC_N PF13850.6 NODE_56381_length_303_cov_0.970149_g48443_i0reverse_frame_2 - 0.0097 16.2 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Defensin_big PF14862.6 NODE_56380_length_303_cov_1.104478_g48442_i0forward_frame_3 - 0.88 9.9 5.4 1.2 9.4 5.4 1.3 1 0 0 1 1 1 0 Big defensin DUF3270 PF11674.8 NODE_56377_length_303_cov_1.335821_g48439_i0reverse_frame_3 - 0.00072 19.7 6.2 0.0013 18.9 6.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) YjcQ PF09639.10 NODE_56377_length_303_cov_1.335821_g48439_i0forward_frame_2 - 0.0089 16.2 0.8 0.012 15.8 0.8 1.2 1 0 0 1 1 1 1 YjcQ protein Indigoidine_A PF04227.12 NODE_56373_length_303_cov_1.440299_g48435_i0reverse_frame_2 - 0.14 11.5 0.1 0.17 11.2 0.1 1.0 1 0 0 1 1 1 0 Indigoidine synthase A like protein Peptidase_C5 PF00770.18 NODE_56373_length_303_cov_1.440299_g48435_i0forward_frame_3 - 0.005 16.5 0.1 0.0059 16.3 0.1 1.2 1 0 0 1 1 1 1 Adenovirus endoprotease DUF1599 PF07659.11 NODE_56373_length_303_cov_1.440299_g48435_i0forward_frame_3 - 0.63 10.5 2.9 15 6.1 0.6 2.2 2 0 0 2 2 2 0 Nucleotide modification associated domain 1 HU-CCDC81_euk_2 PF18289.1 NODE_56372_length_303_cov_1.458955_g48434_i0reverse_frame_3 - 6.1e-08 32.7 0.2 9e-08 32.2 0.2 1.3 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 DUF3480 PF11979.8 NODE_56372_length_303_cov_1.458955_g48434_i0reverse_frame_3 - 0.012 14.6 0.9 0.013 14.5 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3480) NosD PF05048.13 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_3 - 0.0026 17.1 0.4 0.0029 16.9 0.4 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_3 - 0.0027 17.6 1.0 0.0032 17.3 1.0 1.1 1 0 0 1 1 1 1 Right handed beta helix region Malate_synthase PF01274.22 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_3 - 0.099 10.9 0.0 0.11 10.7 0.0 1.0 1 0 0 1 1 1 0 Malate synthase Beta_helix PF13229.6 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_2 - 0.0011 18.8 0.2 0.0013 18.6 0.2 1.1 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_2 - 0.0013 18.0 0.2 0.0016 17.8 0.2 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Kinesin PF00225.23 NODE_56366_length_303_cov_1.634328_g48428_i0forward_frame_3 - 1.8e-22 79.7 0.0 2e-22 79.6 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain YWFCY PF14293.6 NODE_56364_length_303_cov_1.738806_g48426_i0forward_frame_2 - 0.0074 16.6 0.1 0.013 15.8 0.1 1.5 1 0 0 1 1 1 1 YWFCY protein Calcipressin PF04847.12 NODE_56363_length_303_cov_1.779851_g48425_i0reverse_frame_3 - 0.073 12.8 0.3 0.085 12.6 0.3 1.1 1 0 0 1 1 1 0 Calcipressin DUF1473 PF07341.11 NODE_56359_length_303_cov_1.869403_g48421_i0forward_frame_2 - 0.05 13.4 0.1 0.056 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1473) Ras PF00071.22 NODE_56349_length_303_cov_2.108209_g48411_i0reverse_frame_3 - 1.7e-09 37.5 0.0 5.7e-06 26.0 0.0 2.1 1 1 1 2 2 2 2 Ras family Roc PF08477.13 NODE_56349_length_303_cov_2.108209_g48411_i0reverse_frame_3 - 7.4e-07 29.4 0.0 0.0003 21.0 0.0 2.1 1 1 1 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase Nucleoplasmin PF03066.15 NODE_56348_length_303_cov_2.115672_g48410_i0reverse_frame_3 - 0.086 13.3 0.4 0.11 13.0 0.4 1.3 1 1 0 1 1 1 0 Nucleoplasmin/nucleophosmin domain SMN PF06003.12 NODE_56345_length_303_cov_2.197761_g48407_i0forward_frame_3 - 8.9 5.5 7.4 1.1 8.5 1.0 1.9 1 1 0 2 2 2 0 Survival motor neuron protein (SMN) CBP PF12192.8 NODE_56344_length_303_cov_2.205224_g48406_i0forward_frame_2 - 0.071 13.3 2.0 0.089 13.0 2.0 1.2 1 0 0 1 1 1 0 Fungal calcium binding protein RCC1 PF00415.18 NODE_56343_length_303_cov_2.223881_g48405_i0reverse_frame_2 - 4.2e-09 36.9 0.3 0.0003 21.3 0.3 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_56343_length_303_cov_2.223881_g48405_i0reverse_frame_2 - 1.5e-06 27.9 0.6 2e-06 27.4 0.6 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Baculo_11_kDa PF06143.11 NODE_56341_length_303_cov_2.313433_g48403_i0reverse_frame_3 - 5.3 6.7 6.4 0.28 10.8 0.4 1.8 1 1 1 2 2 2 0 Baculovirus 11 kDa family DUF4315 PF14193.6 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.0034 17.4 2.3 0.0034 17.4 2.3 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4315) ADIP PF11559.8 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.0036 17.4 4.6 0.0042 17.2 4.6 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF4558 PF15104.6 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.012 15.7 4.8 0.023 14.8 3.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4558) Cluap1 PF10234.9 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.013 14.9 4.6 0.015 14.7 4.6 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 Herpes_UL6 PF01763.16 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.018 13.6 2.8 0.019 13.5 2.8 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like PRKG1_interact PF15898.5 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.021 15.7 6.2 0.025 15.5 6.2 1.1 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain DASH_Dad4 PF08650.10 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.042 13.8 1.9 0.062 13.3 1.9 1.3 1 0 0 1 1 1 0 DASH complex subunit Dad4 BRE1 PF08647.11 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.045 13.8 9.2 0.059 13.5 9.2 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase TMCO5 PF14992.6 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.056 13.0 6.9 0.074 12.6 6.9 1.2 1 0 0 1 1 1 0 TMCO5 family tRNA_bind_2 PF13725.6 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.076 12.7 4.0 0.094 12.4 4.0 1.1 1 0 0 1 1 1 0 Possible tRNA binding domain DUF1664 PF07889.12 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.18 11.8 3.9 0.21 11.6 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) PI3K_P85_iSH2 PF16454.5 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.21 11.2 9.6 0.25 10.9 9.6 1.0 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4094 PF13334.6 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.27 11.7 5.9 1.1 9.7 5.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) TMPIT PF07851.13 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.61 9.3 4.3 0.67 9.1 4.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein GPS2_interact PF15784.5 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 0.91 10.0 8.7 0.94 10.0 6.3 1.9 1 1 1 2 2 2 0 G-protein pathway suppressor 2-interacting domain DUF641 PF04859.12 NODE_56339_length_303_cov_2.417910_g48401_i0reverse_frame_3 - 1 9.7 7.0 1.8 8.9 1.1 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Spo7 PF03907.13 NODE_56338_length_303_cov_2.574627_g48400_i0forward_frame_3 - 0.99 8.8 4.9 1 8.8 4.9 1.1 1 0 0 1 1 1 0 Spo7-like protein PEP-utilizers PF00391.23 NODE_56337_length_303_cov_2.690299_g48399_i0forward_frame_3 - 3.1e-07 30.0 0.0 6e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PAD_M PF08527.10 NODE_56337_length_303_cov_2.690299_g48399_i0forward_frame_3 - 0.025 14.3 0.0 0.6 9.8 0.0 2.0 1 1 0 2 2 2 0 Protein-arginine deiminase (PAD) middle domain Post_transc_reg PF13797.6 NODE_56336_length_303_cov_2.832090_g48398_i0reverse_frame_3 - 0.045 13.6 0.2 0.58 10.1 0.1 2.0 1 1 1 2 2 2 0 Post-transcriptional regulator DUF4818 PF16089.5 NODE_56335_length_303_cov_2.854478_g48397_i0reverse_frame_3 - 0.054 14.0 0.7 0.85 10.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4818) IAT_beta PF11924.8 NODE_56333_length_303_cov_2.955224_g48395_i0reverse_frame_3 - 7.2e-45 153.5 0.9 7.7e-45 153.4 0.9 1.0 1 0 0 1 1 1 1 Inverse autotransporter, beta-domain MFS_1 PF07690.16 NODE_56332_length_303_cov_2.962687_g48394_i0forward_frame_2 - 0.0044 16.0 9.9 0.0046 15.9 9.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Disintegrin PF00200.23 NODE_56327_length_303_cov_3.750000_g48389_i0forward_frame_3 - 0.0019 18.9 6.3 0.37 11.6 1.7 2.4 2 1 0 2 2 2 2 Disintegrin DUF2164 PF09932.9 NODE_56326_length_303_cov_3.917910_g48388_i0reverse_frame_3 - 0.042 13.9 0.0 0.058 13.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) Peptidase_S24 PF00717.23 NODE_56326_length_303_cov_3.917910_g48388_i0forward_frame_2 - 3.8e-15 55.6 0.0 6.8e-15 54.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase S24-like DUF2917 PF11142.8 NODE_56325_length_303_cov_4.235075_g48387_i0forward_frame_3 - 0.093 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2917) DUF2722 PF10846.8 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_2 - 0.039 12.9 0.7 0.04 12.9 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) Spem1 PF15670.5 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_2 - 0.095 12.3 0.3 0.12 12.0 0.3 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 zf-met2 PF12907.7 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_2 - 0.13 12.4 0.2 0.25 11.5 0.0 1.5 2 0 0 2 2 2 0 Zinc-binding DUF1820 PF08850.11 NODE_56321_length_303_cov_11.201493_g48383_i0forward_frame_2 - 0.007 16.8 1.0 0.0086 16.6 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1820) UPA PF17217.3 NODE_56320_length_303_cov_15.813433_g48382_i0reverse_frame_3 - 0.045 13.7 0.5 0.052 13.4 0.5 1.0 1 0 0 1 1 1 0 UPA domain PET PF06297.14 NODE_56320_length_303_cov_15.813433_g48382_i0reverse_frame_2 - 0.043 14.1 0.8 0.052 13.9 0.8 1.2 1 0 0 1 1 1 0 PET Domain Promethin PF16015.5 NODE_56315_length_303_cov_47.526119_g48377_i0forward_frame_3 - 4.3 7.3 18.1 6.1 6.8 18.1 1.3 1 0 0 1 1 1 0 Promethin PIF6 PF05341.11 NODE_56310_length_303_cov_56.145522_g48372_i0reverse_frame_2 - 0.054 13.6 0.1 0.065 13.4 0.1 1.2 1 0 0 1 1 1 0 Per os infectivity factor 6 IRF PF00605.17 NODE_56310_length_303_cov_56.145522_g48372_i0reverse_frame_2 - 0.21 11.9 5.6 0.24 11.7 5.6 1.1 1 0 0 1 1 1 0 Interferon regulatory factor transcription factor Connexin PF00029.19 NODE_56310_length_303_cov_56.145522_g48372_i0reverse_frame_2 - 0.24 11.2 2.1 0.27 11.0 2.1 1.1 1 0 0 1 1 1 0 Connexin WD40 PF00400.32 NODE_56309_length_303_cov_58.313433_g48371_i0forward_frame_3 - 2.2e-10 41.0 0.2 4.5e-07 30.5 0.3 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_56309_length_303_cov_58.313433_g48371_i0forward_frame_3 - 8.4e-05 22.8 0.0 0.013 15.8 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Utp8 PF10395.9 NODE_56309_length_303_cov_58.313433_g48371_i0forward_frame_3 - 0.15 10.5 0.0 0.16 10.4 0.0 1.1 1 0 0 1 1 1 0 Utp8 family Filo_VP24 PF06389.11 NODE_56308_length_303_cov_58.391791_g48370_i0forward_frame_2 - 0.053 13.0 0.1 0.059 12.9 0.1 1.1 1 0 0 1 1 1 0 Filovirus membrane-associated protein VP24 LIF_OSM PF01291.17 NODE_56307_length_303_cov_60.850746_g48369_i0forward_frame_3 - 0.014 15.5 0.0 0.081 13.1 0.0 1.8 2 0 0 2 2 2 0 LIF / OSM family DUF1980 PF09323.10 NODE_56306_length_303_cov_61.839552_g48368_i0reverse_frame_2 - 0.86 9.5 8.1 1.3 9.0 8.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) Erv26 PF04148.13 NODE_56306_length_303_cov_61.839552_g48368_i0forward_frame_3 - 0.36 10.6 4.4 0.16 11.7 1.4 1.6 1 1 1 2 2 2 0 Transmembrane adaptor Erv26 SelK_SelG PF10961.8 NODE_56305_length_303_cov_62.417910_g48367_i0reverse_frame_2 - 0.19 12.3 0.0 0.23 12.1 0.0 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG Piezo_RRas_bdg PF12166.8 NODE_56305_length_303_cov_62.417910_g48367_i0forward_frame_3 - 0.056 12.7 1.8 0.052 12.8 1.8 1.2 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain TruB_C_2 PF16198.5 NODE_56304_length_303_cov_62.514925_g48366_i0forward_frame_3 - 3.3e-11 43.1 0.1 5.2e-11 42.5 0.1 1.3 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain DUF3150 PF11348.8 NODE_56303_length_303_cov_63.660448_g48365_i0reverse_frame_2 - 0.0006 19.1 0.5 0.00074 18.8 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3150) Gram_pos_anchor PF00746.21 NODE_56298_length_303_cov_68.473881_g48360_i0forward_frame_3 - 0.1 12.6 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Kinesin PF00225.23 NODE_56297_length_303_cov_68.593284_g48359_i0forward_frame_2 - 1.7e-08 33.8 0.1 1.5e-07 30.7 0.2 1.8 1 1 1 2 2 2 2 Kinesin motor domain Rhodanese_C PF12368.8 NODE_56292_length_303_cov_77.690299_g48354_i0forward_frame_2 - 0.12 12.8 4.9 0.39 11.1 1.7 2.2 2 0 0 2 2 2 0 Rhodanase C-terminal DASH_Dad4 PF08650.10 NODE_56290_length_303_cov_80.604478_g48352_i0forward_frame_3 - 0.12 12.3 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 DASH complex subunit Dad4 SipA_VBS PF17985.1 NODE_56290_length_303_cov_80.604478_g48352_i0forward_frame_2 - 0.41 10.6 0.5 0.41 10.6 0.5 2.1 2 0 0 2 2 2 0 SipA vinculin binding site BolA PF01722.18 NODE_56289_length_303_cov_83.324627_g48351_i0forward_frame_2 - 0.0013 19.0 0.0 0.0022 18.3 0.0 1.3 1 0 0 1 1 1 1 BolA-like protein HMG_box_5 PF14887.6 NODE_56286_length_303_cov_90.376866_g48348_i0forward_frame_3 - 0.12 12.3 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 HMG (high mobility group) box 5 FTSW_RODA_SPOVE PF01098.19 NODE_56285_length_303_cov_91.085821_g48347_i0reverse_frame_3 - 0.12 11.4 0.2 0.15 11.0 0.2 1.0 1 0 0 1 1 1 0 Cell cycle protein DUF4096 PF13340.6 NODE_56282_length_303_cov_98.380597_g48344_i0reverse_frame_3 - 0.0077 16.4 0.0 0.012 15.8 0.0 1.3 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) zf-Sec23_Sec24 PF04810.15 NODE_56282_length_303_cov_98.380597_g48344_i0reverse_frame_2 - 0.015 15.3 0.2 0.025 14.6 0.2 1.3 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger LIME1 PF15332.6 NODE_56281_length_303_cov_101.944030_g48343_i0reverse_frame_3 - 0.14 11.7 0.1 0.21 11.2 0.1 1.3 1 1 0 1 1 1 0 Lck-interacting transmembrane adapter 1 DUF229 PF02995.17 NODE_56281_length_303_cov_101.944030_g48343_i0reverse_frame_2 - 3.1e-07 29.4 0.9 3.4e-07 29.2 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Amino_oxidase PF01593.24 NODE_56281_length_303_cov_101.944030_g48343_i0reverse_frame_2 - 0.14 11.5 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase DUF5331 PF17265.2 NODE_56279_length_303_cov_110.283582_g48341_i0reverse_frame_2 - 0.13 12.0 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5331) DarT PF14487.6 NODE_56278_length_303_cov_112.858209_g48340_i0reverse_frame_3 - 0.067 13.0 0.0 0.073 12.9 0.0 1.1 1 0 0 1 1 1 0 ssDNA thymidine ADP-ribosyltransferase, DarT Peptidase_Prp PF04327.12 NODE_56275_length_303_cov_138.305970_g48337_i0reverse_frame_3 - 0.00044 20.4 0.0 0.00051 20.2 0.0 1.1 1 0 0 1 1 1 1 Cysteine protease Prp GTP_cyclohydroI PF01227.22 NODE_56271_length_303_cov_280.753731_g48334_i0reverse_frame_3 - 0.2 11.0 0.1 0.25 10.7 0.1 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase I # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks237.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks237.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks237.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks237.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MecA_N PF05223.11 NODE_56271_length_303_cov_280.753731_g48334_i0forward_frame_2 - 0.074 13.3 0.2 0.097 12.9 0.2 1.2 1 0 0 1 1 1 0 NTF2-like N-terminal transpeptidase domain BatD PF13584.6 NODE_56266_length_303_cov_1132.429104_g48329_i0forward_frame_3 - 0.28 10.0 0.1 0.3 9.8 0.1 1.0 1 0 0 1 1 1 0 Oxygen tolerance Nse4_C PF08743.10 ORF9970 - 0.15 12.4 0.0 0.35 11.1 0.0 1.8 1 1 0 1 1 1 0 Nse4 C-terminal DEAD PF00270.29 ORF98446 - 4.9e-24 85.1 0.0 5.2e-24 85.0 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 ORF98446 - 0.013 15.5 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Glucokinase PF02685.16 ORF97358 - 2.3e-07 30.2 0.0 2.4e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 Glucokinase DUF4065 PF13274.6 ORF97358 - 0.064 14.1 0.0 0.088 13.7 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) Peptidase_C2 PF00648.21 ORF96884 - 8.8e-26 90.6 0.4 8.8e-26 90.6 0.4 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease SGL PF08450.12 ORF96265 - 0.014 15.0 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 SMP-30/Gluconolactonase/LRE-like region TRC8_N PF13705.6 ORF96044 - 0.034 13.1 0.0 0.04 12.9 0.0 1.0 1 0 0 1 1 1 0 TRC8 N-terminal domain ECH_1 PF00378.20 ORF95503 - 6e-07 29.0 0.1 6.4e-07 28.9 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Cyclin PF08613.11 ORF94619 - 5e-06 27.0 0.0 6.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF94619 - 0.00022 20.9 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Pox_E10 PF04805.12 ORF94619 - 0.08 12.8 0.4 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 E10-like protein conserved region CSN7a_helixI PF18392.1 ORF94368 - 0.063 13.2 0.3 0.13 12.2 0.3 1.5 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain DUF3719 PF12516.8 ORF94368 - 0.13 12.0 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) MTBP_N PF14918.6 ORF94287 - 0.11 11.9 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 MDM2-binding PhoR PF11808.8 ORF93617 - 0.065 13.7 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR Ank_5 PF13857.6 ORF93497 - 2.3e-07 31.0 0.0 4.2e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF93497 - 5.7e-07 30.0 0.0 9.8e-07 29.3 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF93497 - 6.2e-07 29.2 0.1 2.5e-06 27.4 0.0 2.0 2 1 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 ORF93497 - 2.4e-06 27.7 0.0 6.7e-06 26.3 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 ORF93497 - 4.1e-06 27.2 0.0 0.015 15.9 0.0 2.0 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Hemerythrin PF01814.23 ORF93158 - 1.4e-21 77.5 0.1 1.5e-21 77.4 0.1 1.0 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain MFS_1 PF07690.16 ORF92791 - 3.8e-06 26.1 1.1 4.3e-06 25.9 1.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily TssN PF17555.2 ORF92791 - 0.008 15.6 4.5 0.0082 15.6 4.5 1.0 1 0 0 1 1 1 1 Type VI secretion system, TssN DUF456 PF04306.13 ORF92791 - 0.0097 16.2 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF456) ATP-synt_8 PF00895.20 ORF92791 - 3.6 8.1 6.3 1.1 9.8 1.0 2.4 1 1 2 3 3 3 0 ATP synthase protein 8 DUF3466 PF11949.8 ORF92507 - 0.19 10.3 0.3 0.22 10.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3466) zf-C4_Topoisom PF01396.19 ORF91529 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Pkinase PF00069.25 ORF91283 - 4e-12 46.1 0.1 4.2e-12 46.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF91283 - 1.2e-05 24.3 0.1 1.4e-05 24.1 0.1 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF91283 - 0.0018 17.7 0.2 0.0021 17.4 0.2 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF91283 - 0.0021 18.0 0.0 0.0025 17.8 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF91283 - 0.0025 17.4 0.3 0.0038 16.9 0.1 1.4 2 0 0 2 2 2 1 Choline/ethanolamine kinase PIP49_C PF12260.8 ORF91283 - 0.0046 16.6 0.0 0.0052 16.4 0.0 1.1 1 0 0 1 1 1 1 Protein-kinase domain of FAM69 Pkinase_Tyr PF07714.17 ORF91283 - 0.048 12.9 0.0 0.048 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase Kinase-like PF14531.6 ORF91283 - 0.049 12.9 0.0 0.056 12.7 0.0 1.1 1 0 0 1 1 1 0 Kinase-like EcKinase PF02958.20 ORF91283 - 0.081 12.2 0.1 0.095 12.0 0.1 1.1 1 0 0 1 1 1 0 Ecdysteroid kinase Fibrinogen_aC PF12160.8 ORF91283 - 0.094 12.6 0.4 0.86 9.5 0.4 2.0 1 1 0 1 1 1 0 Fibrinogen alpha C domain zf-C4_Topoisom PF01396.19 ORF90930 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger zf-C4_Topoisom PF01396.19 ORF90247 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger zf-C4_Topoisom PF01396.19 ORF89822 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Spt5_N PF11942.8 ORF89718 - 0.0065 17.4 8.8 0.0084 17.1 8.8 1.2 1 0 0 1 1 1 1 Spt5 transcription elongation factor, acidic N-terminal CX PF01705.19 ORF89428 - 0.11 13.0 6.3 0.35 11.4 0.0 2.8 2 1 0 2 2 2 0 CX module DIOX_N PF14226.6 ORF88632 - 0.047 14.5 0.1 0.089 13.6 0.1 1.5 1 1 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal TMEM61 PF15105.6 ORF88345 - 0.002 18.0 1.5 0.0025 17.7 1.5 1.3 1 1 0 1 1 1 1 TMEM61 protein family SEEK1 PF15357.6 ORF88345 - 0.016 15.4 1.2 0.02 15.0 1.2 1.3 1 0 0 1 1 1 0 Psoriasis susceptibility 1 candidate 1 Cyclin PF08613.11 ORF882 - 5e-06 27.0 0.0 6.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF882 - 0.00022 20.9 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Pox_E10 PF04805.12 ORF882 - 0.08 12.8 0.4 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 E10-like protein conserved region MDFI PF15316.6 ORF88195 - 0.026 14.6 0.4 0.03 14.4 0.4 1.1 1 0 0 1 1 1 0 MyoD family inhibitor Glyco_hydro_63N PF16923.5 ORF88195 - 0.15 12.1 1.5 0.18 11.9 1.5 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 63 N-terminal domain DUF4699 PF15770.5 ORF8816 - 0.11 12.2 0.1 0.12 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4699) COX15-CtaA PF02628.15 ORF87885 - 0.12 11.4 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Cytochrome oxidase assembly protein FapA PF03961.13 ORF87761 - 0.0046 15.6 5.0 0.0053 15.4 5.0 1.0 1 0 0 1 1 1 1 Flagellar Assembly Protein A Matrilin_ccoil PF10393.9 ORF87761 - 0.023 14.5 0.5 0.059 13.2 0.5 1.8 1 1 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin DUF1664 PF07889.12 ORF87761 - 0.026 14.5 4.6 0.033 14.2 4.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2481 PF10654.9 ORF87761 - 0.26 11.3 5.7 3.8 7.5 1.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2481) DUF3627 PF12299.8 ORF87734 - 0.0024 17.9 1.0 0.007 16.4 0.8 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF3627) DUF2262 PF10020.9 ORF87734 - 0.051 14.0 0.4 0.059 13.8 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) DsrC PF04358.13 ORF87734 - 0.1 13.1 0.0 0.13 12.8 0.0 1.2 1 0 0 1 1 1 0 DsrC like protein Pkinase_Tyr PF07714.17 ORF8706 - 6.2e-05 22.4 0.0 6.2e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF8706 - 0.00023 20.6 0.0 0.00024 20.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Imm7 PF15585.6 ORF8706 - 0.077 13.3 0.0 0.11 12.8 0.0 1.3 1 1 0 1 1 1 0 Immunity protein 7 RecO_C PF02565.15 ORF87018 - 0.11 12.3 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 Recombination protein O C terminal TT_ORF1 PF02956.14 ORF86658 - 0.53 8.9 8.5 0.56 8.8 8.5 1.2 1 0 0 1 1 1 0 TT viral orf 1 UQ_con PF00179.26 ORF86373 - 0.0031 17.2 0.0 0.0033 17.1 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme NPV_P10 PF05531.12 ORF8631 - 0.016 15.6 2.3 0.026 15.0 1.0 1.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Phage_GP20 PF06810.11 ORF8631 - 0.022 14.5 1.7 0.027 14.3 1.7 1.0 1 0 0 1 1 1 0 Phage minor structural protein GP20 NRIP1_repr_1 PF15687.5 ORF85808 - 0.018 14.8 1.8 0.019 14.6 1.8 1.0 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 1 Ndc1_Nup PF09531.10 ORF85808 - 0.054 12.2 0.1 0.061 12.0 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup KH_9 PF17904.1 ORF85627 - 0.58 10.6 6.9 0.45 10.9 3.9 2.0 1 1 1 2 2 2 0 FMRP KH0 domain Flp1_like PF16982.5 ORF85627 - 0.81 9.1 7.0 0.66 9.4 4.0 2.3 1 1 1 2 2 2 0 Putative Flagellin, Flp1-like, domain PRT_C PF08372.10 ORF85320 - 0.06 13.1 0.6 0.079 12.7 0.6 1.3 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal PseudoU_synth_2 PF00849.22 ORF85124 - 1.7e-06 28.3 0.9 1.7e-06 28.2 0.1 1.4 2 0 0 2 2 2 1 RNA pseudouridylate synthase RecO_C PF02565.15 ORF85120 - 0.11 12.3 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 Recombination protein O C terminal Cyclin PF08613.11 ORF84105 - 5e-06 27.0 0.0 6.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF84105 - 0.00022 20.9 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Pox_E10 PF04805.12 ORF84105 - 0.08 12.8 0.4 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 E10-like protein conserved region Cpn10 PF00166.21 ORF83780 - 1.6e-20 72.9 0.0 1.9e-20 72.7 0.0 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit ABC_trans_N PF14510.6 ORF83236 - 0.069 13.8 0.0 0.077 13.6 0.0 1.2 1 0 0 1 1 1 0 ABC-transporter N-terminal IFT57 PF10498.9 ORF82977 - 8e-11 41.5 1.3 8.6e-11 41.4 1.3 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Pkinase PF00069.25 ORF82661 - 2e-26 92.9 0.0 2.2e-26 92.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82661 - 1e-12 47.9 0.0 1.1e-12 47.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF82661 - 0.0021 16.9 0.0 0.0025 16.7 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF82661 - 0.0065 16.4 0.1 0.0083 16.1 0.1 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF82661 - 0.026 13.8 0.0 0.031 13.6 0.0 1.1 1 0 0 1 1 1 0 Kinase-like MFS_1 PF07690.16 ORF81745 - 0.003 16.5 5.9 0.013 14.4 5.9 1.8 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF81745 - 0.018 13.9 0.1 0.021 13.7 0.1 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter CD20 PF04103.15 ORF81628 - 0.028 14.5 2.1 0.031 14.4 2.1 1.1 1 0 0 1 1 1 0 CD20-like family DUF4201 PF13870.6 ORF81043 - 0.0093 15.7 0.5 0.011 15.5 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) FHA_2 PF17913.1 ORF81043 - 0.019 15.2 0.1 0.022 15.0 0.1 1.2 1 0 0 1 1 1 0 FHA domain CitX PF03802.14 ORF81043 - 0.04 13.7 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ZapB PF06005.12 ORF81043 - 0.063 13.7 0.2 0.084 13.3 0.2 1.3 1 0 0 1 1 1 0 Cell division protein ZapB DMPK_coil PF08826.10 ORF81043 - 0.083 13.0 0.6 0.12 12.4 0.6 1.3 1 0 0 1 1 1 0 DMPK coiled coil domain like TFIID_20kDa PF03847.13 ORF81043 - 0.091 13.3 2.9 0.6 10.7 2.5 2.3 1 1 0 1 1 1 0 Transcription initiation factor TFIID subunit A Ribosomal_S5_C PF03719.15 ORF80662 - 0.083 12.4 0.0 0.21 11.1 0.0 1.7 2 0 0 2 2 2 0 Ribosomal protein S5, C-terminal domain COPIIcoated_ERV PF07970.12 ORF804 - 2.5e-24 86.4 0.5 2.8e-24 86.2 0.5 1.0 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter zf-C4_Topoisom PF01396.19 ORF79393 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Abhydrolase_2 PF02230.16 ORF7850 - 0.014 15.2 0.2 0.016 15.0 0.2 1.0 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase zf-RING-like PF08746.11 ORF7850 - 1.4 9.3 13.9 3.3 8.1 5.8 2.2 1 1 1 2 2 2 0 RING-like domain DUF1344 PF07076.11 ORF78327 - 0.11 12.4 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1344) DUF3292 PF11696.8 ORF76802 - 0.069 11.5 1.3 0.086 11.2 1.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) CSN7a_helixI PF18392.1 ORF76642 - 0.067 13.1 0.3 0.13 12.2 0.3 1.4 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain DUF3719 PF12516.8 ORF76642 - 0.13 12.0 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) ETF_alpha PF00766.19 ORF76576 - 2.9e-14 52.9 0.8 4.5e-14 52.2 0.8 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain DUF726 PF05277.12 ORF76576 - 0.019 13.9 0.5 0.021 13.7 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Ysc84 PF04366.12 ORF76576 - 0.11 12.3 0.3 0.11 12.3 0.3 1.4 2 0 0 2 2 2 0 Las17-binding protein actin regulator zf-C4_Topoisom PF01396.19 ORF76154 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Cyclin PF08613.11 ORF75995 - 5e-06 27.0 0.0 6.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF75995 - 0.00022 20.9 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Pox_E10 PF04805.12 ORF75995 - 0.08 12.8 0.4 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 E10-like protein conserved region Cpn60_TCP1 PF00118.24 ORF75900 - 1.9e-13 49.9 0.0 2.2e-13 49.7 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family OmpH PF03938.14 ORF75062 - 0.0086 16.4 2.9 0.011 16.1 2.9 1.0 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) Syntaxin PF00804.25 ORF75062 - 0.028 14.1 2.8 0.026 14.2 1.5 1.5 1 1 1 2 2 2 0 Syntaxin ACT_3 PF10000.9 ORF75062 - 0.033 14.1 0.1 0.047 13.6 0.1 1.3 1 0 0 1 1 1 0 ACT domain Cep57_MT_bd PF06657.13 ORF75062 - 0.039 14.4 3.4 1 9.8 0.4 2.2 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 FlaC_arch PF05377.11 ORF75062 - 0.08 13.3 1.2 8.8 6.8 0.3 2.2 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF3800 PF12686.7 ORF75062 - 0.11 13.1 1.2 0.13 12.9 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3800) Synaptobrevin PF00957.21 ORF75062 - 0.12 12.2 1.5 7.8 6.4 0.1 2.2 2 0 0 2 2 2 0 Synaptobrevin Phage_GPO PF05929.11 ORF75062 - 0.15 11.6 1.8 0.17 11.5 1.8 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase FlxA PF14282.6 ORF75062 - 8 6.5 9.1 1.8e+02 2.2 9.1 2.2 1 1 0 1 1 1 0 FlxA-like protein DSPc PF00782.20 ORF74868 - 2.2e-13 50.2 0.3 3.8e-13 49.4 0.3 1.4 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain ThiF PF00899.21 ORF74746 - 0.00013 21.4 0.0 0.00015 21.2 0.0 1.0 1 0 0 1 1 1 1 ThiF family Ecm33 PF12454.8 ORF74746 - 0.019 15.1 0.9 0.028 14.6 0.9 1.3 1 0 0 1 1 1 0 GPI-anchored cell wall organization protein DUF4201 PF13870.6 ORF74626 - 0.0093 15.7 0.5 0.011 15.5 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) FHA_2 PF17913.1 ORF74626 - 0.019 15.2 0.1 0.022 15.0 0.1 1.2 1 0 0 1 1 1 0 FHA domain CitX PF03802.14 ORF74626 - 0.04 13.7 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ZapB PF06005.12 ORF74626 - 0.063 13.7 0.2 0.084 13.3 0.2 1.3 1 0 0 1 1 1 0 Cell division protein ZapB DMPK_coil PF08826.10 ORF74626 - 0.083 13.0 0.6 0.12 12.4 0.6 1.3 1 0 0 1 1 1 0 DMPK coiled coil domain like TFIID_20kDa PF03847.13 ORF74626 - 0.091 13.3 2.9 0.6 10.7 2.5 2.3 1 1 0 1 1 1 0 Transcription initiation factor TFIID subunit A BBP1_C PF15272.6 ORF74472 - 0.021 14.6 1.1 0.026 14.3 1.1 1.1 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal Cyclin PF08613.11 ORF72992 - 5e-06 27.0 0.0 6.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF72992 - 0.00022 20.9 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Pox_E10 PF04805.12 ORF72992 - 0.08 12.8 0.4 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 E10-like protein conserved region Cyclin PF08613.11 ORF72951 - 5e-06 27.0 0.0 6.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF72951 - 0.00022 20.9 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Pox_E10 PF04805.12 ORF72951 - 0.08 12.8 0.4 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 E10-like protein conserved region CSD PF00313.22 ORF72941 - 2.6e-18 65.6 0.2 3.4e-18 65.2 0.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF72941 - 0.014 15.0 0.8 0.025 14.3 0.8 1.5 1 0 0 1 1 1 0 Ribonuclease B OB domain DUF4317 PF14199.6 ORF72657 - 4.3e-06 26.1 0.2 4.9e-06 26.0 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4317) DUF4201 PF13870.6 ORF72464 - 0.0093 15.7 0.5 0.011 15.5 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) FHA_2 PF17913.1 ORF72464 - 0.019 15.2 0.1 0.022 15.0 0.1 1.2 1 0 0 1 1 1 0 FHA domain CitX PF03802.14 ORF72464 - 0.04 13.7 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ZapB PF06005.12 ORF72464 - 0.063 13.7 0.2 0.084 13.3 0.2 1.3 1 0 0 1 1 1 0 Cell division protein ZapB DMPK_coil PF08826.10 ORF72464 - 0.083 13.0 0.6 0.12 12.4 0.6 1.3 1 0 0 1 1 1 0 DMPK coiled coil domain like TFIID_20kDa PF03847.13 ORF72464 - 0.091 13.3 2.9 0.6 10.7 2.5 2.3 1 1 0 1 1 1 0 Transcription initiation factor TFIID subunit A SNARE PF05739.19 ORF71221 - 2.5e-06 27.4 0.1 2.5e-06 27.4 0.1 1.8 2 0 0 2 2 2 1 SNARE domain Use1 PF09753.9 ORF71221 - 0.00013 21.8 2.0 0.00015 21.5 2.0 1.0 1 0 0 1 1 1 1 Membrane fusion protein Use1 Prominin PF05478.11 ORF71221 - 0.0067 14.5 0.3 0.0074 14.3 0.3 1.0 1 0 0 1 1 1 1 Prominin ERGIC_N PF13850.6 ORF71221 - 0.012 15.9 0.9 0.012 15.9 0.9 1.6 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF16 PF01519.16 ORF71221 - 0.013 16.0 4.2 0.017 15.6 4.2 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 COG5 PF10392.9 ORF71221 - 0.029 14.5 0.3 0.032 14.4 0.3 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 SMC_Nse1 PF07574.13 ORF71221 - 0.034 14.0 0.2 0.041 13.8 0.2 1.1 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex RmuC PF02646.16 ORF71221 - 0.049 12.7 0.9 0.054 12.6 0.9 1.0 1 0 0 1 1 1 0 RmuC family Tex_N PF09371.10 ORF71221 - 0.12 12.0 0.9 0.15 11.7 0.9 1.1 1 0 0 1 1 1 0 Tex-like protein N-terminal domain Pex24p PF06398.11 ORF71221 - 0.15 11.0 0.3 0.16 10.9 0.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin TetR_C_5 PF08360.11 ORF71023 - 0.0025 18.0 0.4 0.0028 17.8 0.4 1.1 1 0 0 1 1 1 1 QacR-like protein, C-terminal region SOTI PF17079.5 ORF70530 - 0.012 16.0 0.6 0.024 15.1 0.1 1.6 1 1 1 2 2 2 0 Male-specific protein scotti Rft-1 PF04506.13 ORF70399 - 1.2e-17 63.9 7.2 1.3e-17 63.8 7.2 1.0 1 0 0 1 1 1 1 Rft protein DUF3842 PF12953.7 ORF70399 - 0.024 15.0 0.9 0.027 14.8 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3842) RELT PF12606.8 ORF70399 - 0.44 9.6 2.0 0.93 8.5 2.0 1.6 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Ribosomal_S8e PF01201.22 ORF69718 - 9.6e-09 35.5 0.0 9.6e-09 35.5 0.0 2.1 1 1 1 2 2 2 1 Ribosomal protein S8e SMAP PF15477.6 ORF69718 - 0.028 15.3 1.7 0.041 14.8 1.7 1.2 1 0 0 1 1 1 0 Small acidic protein family OmpH PF03938.14 ORF69624 - 0.0085 16.4 3.1 0.011 16.1 3.1 1.0 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) Cep57_MT_bd PF06657.13 ORF69624 - 0.0089 16.5 3.0 1 9.8 0.3 2.3 1 1 1 2 2 2 2 Centrosome microtubule-binding domain of Cep57 ACT_3 PF10000.9 ORF69624 - 0.033 14.1 0.1 0.05 13.5 0.1 1.3 1 1 0 1 1 1 0 ACT domain DUF3800 PF12686.7 ORF69624 - 0.086 13.5 1.3 0.1 13.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3800) Synaptobrevin PF00957.21 ORF69624 - 0.14 12.0 1.7 7.4 6.4 0.2 2.2 2 0 0 2 2 2 0 Synaptobrevin Phage_GPO PF05929.11 ORF69624 - 0.15 11.6 1.8 0.17 11.5 1.8 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase FlxA PF14282.6 ORF69624 - 8.3 6.5 9.5 1.9e+02 2.1 9.6 2.2 1 1 0 1 1 1 0 FlxA-like protein CitX PF03802.14 ORF68393 - 0.12 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Oxysterol_BP PF01237.18 ORF66857 - 1e-26 93.7 0.8 1.1e-26 93.5 0.8 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein AAA_32 PF13654.6 ORF66650 - 0.022 13.6 0.2 0.03 13.1 0.2 1.1 1 0 0 1 1 1 0 AAA domain CdiI_2 PF18593.1 ORF65782 - 0.012 16.3 0.0 0.022 15.4 0.0 1.4 1 0 0 1 1 1 0 CdiI immunity protein zf-C4_Topoisom PF01396.19 ORF65681 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger SH3_19 PF18597.1 ORF65404 - 0.13 12.1 0.1 0.23 11.3 0.1 1.4 1 0 0 1 1 1 0 Myosin X N-terminal SH3 domain Allantoicase PF03561.15 ORF64751 - 0.049 13.6 0.2 0.049 13.6 0.2 1.1 1 0 0 1 1 1 0 Allantoicase repeat Ion_trans PF00520.31 ORF6473 - 5e-18 65.2 3.3 5.7e-18 65.0 3.3 1.0 1 0 0 1 1 1 1 Ion transport protein Oxidored_q2 PF00420.24 ORF63980 - 0.0088 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PhyH PF05721.13 ORF6328 - 0.058 13.6 0.0 0.081 13.2 0.0 1.3 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) Bac_export_2 PF01312.19 ORF63044 - 9.7e-25 87.5 1.0 1.1e-24 87.2 1.0 1.1 1 0 0 1 1 1 1 FlhB HrpN YscU SpaS Family PSCyt3 PF07627.11 ORF62927 - 0.15 12.4 0.1 0.35 11.2 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1588) CReP_N PF10472.9 ORF62927 - 0.94 8.3 5.0 1.1 8.1 5.0 1.0 1 0 0 1 1 1 0 eIF2-alpha phosphatase phosphorylation constitutive repressor V_ATPase_I PF01496.19 ORF62427 - 0.12 10.3 0.4 0.14 10.0 0.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2852 PF11014.8 ORF62378 - 0.51 10.5 3.5 0.65 10.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) LPD15 PF18828.1 ORF6218 - 0.025 14.5 0.8 0.031 14.2 0.8 1.2 1 0 0 1 1 1 0 Large polyvalent-protein-associated domain 15 PapC_N PF13954.6 ORF6173 - 0.036 14.1 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 PapC N-terminal domain FAM216B PF15107.6 ORF61441 - 0.052 13.4 0.1 0.06 13.2 0.1 1.1 1 0 0 1 1 1 0 FAM216B protein family TBPIP PF07106.13 ORF61331 - 0.14 12.1 0.1 0.19 11.7 0.1 1.2 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain ADP_ribosyl_GH PF03747.14 ORF60199 - 7.3e-13 48.9 0.2 9.9e-13 48.5 0.2 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase CinA PF02464.17 ORF60018 - 6.3e-29 100.5 0.1 6.9e-29 100.4 0.1 1.0 1 0 0 1 1 1 1 Competence-damaged protein Glyco_hydro_52 PF03512.13 ORF59957 - 0.02 13.8 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 52 Oxidored_q2 PF00420.24 ORF58846 - 0.0088 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF4541 PF15074.6 ORF57934 - 0.021 15.4 0.1 0.034 14.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4541) Ad_cyc_g-alpha PF08509.11 ORF57934 - 0.15 11.8 0.1 0.5 10.1 0.1 1.8 2 0 0 2 2 2 0 Adenylate cyclase G-alpha binding domain Pep3_Vps18 PF05131.14 ORF57337 - 0.055 13.3 0.5 0.12 12.2 0.4 1.6 1 1 1 2 2 2 0 Pep3/Vps18/deep orange family ISET-FN3_linker PF16625.5 ORF57066 - 0.95 10.0 8.9 0.42 11.2 5.7 2.0 1 1 1 2 2 2 0 Unstructured linking region I-set and fnIII on Brother of CDO FAM216B PF15107.6 ORF56416 - 0.052 13.4 0.1 0.06 13.2 0.1 1.1 1 0 0 1 1 1 0 FAM216B protein family Pkinase PF00069.25 ORF56370 - 5.5e-07 29.2 0.0 6.5e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain PIH1_CS PF18201.1 ORF55576 - 0.0004 20.7 0.0 0.00064 20.1 0.0 1.4 1 1 0 1 1 1 1 PIH1 CS-like domain MARVEL PF01284.23 ORF54696 - 0.032 14.3 0.0 0.037 14.1 0.0 1.1 1 0 0 1 1 1 0 Membrane-associating domain Nrap_D6 PF17407.2 ORF543 - 3.5e-07 30.5 0.0 4.3e-07 30.2 0.0 1.0 1 0 0 1 1 1 1 Nrap protein domain 6 ANAPC4_WD40 PF12894.7 ORF53845 - 0.0027 18.0 0.0 0.12 12.7 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain CPSF_A PF03178.15 ORF53845 - 0.02 14.2 0.0 0.042 13.2 0.0 1.5 1 1 0 1 1 1 0 CPSF A subunit region Lactonase PF10282.9 ORF53845 - 0.085 12.1 0.0 0.091 12.0 0.0 1.0 1 0 0 1 1 1 0 Lactonase, 7-bladed beta-propeller Ubiq_cyt_C_chap PF03981.12 ORF53795 - 0.00061 19.9 0.0 0.0008 19.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquinol-cytochrome C chaperone Cyclin PF08613.11 ORF53380 - 5e-06 27.0 0.0 6.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF53380 - 0.00022 20.9 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Pox_E10 PF04805.12 ORF53380 - 0.08 12.8 0.4 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 E10-like protein conserved region FTA4 PF13093.6 ORF52083 - 0.032 14.1 0.1 0.038 13.9 0.1 1.2 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 CK_II_beta PF01214.18 ORF51934 - 0.083 12.7 0.1 0.1 12.4 0.1 1.1 1 0 0 1 1 1 0 Casein kinase II regulatory subunit CX PF01705.19 ORF51623 - 0.11 13.0 6.3 0.35 11.4 0.0 2.8 2 1 0 2 2 2 0 CX module CsgA PF17334.2 ORF51076 - 0.054 14.2 0.3 0.093 13.5 0.2 1.5 1 1 0 1 1 1 0 Minor curli fiber component A zf-C4_Topoisom PF01396.19 ORF50459 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Orf78 PF06024.12 ORF50060 - 0.29 11.4 2.0 0.28 11.5 1.3 1.5 1 1 0 1 1 1 0 Orf78 (ac78) PAP2 PF01569.21 ORF49022 - 1.5e-16 60.4 0.4 1.7e-16 60.2 0.4 1.1 1 0 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 ORF49022 - 0.0047 16.6 0.1 0.0054 16.5 0.1 1.1 1 0 0 1 1 1 1 PAP2 superfamily Pkinase PF00069.25 ORF48511 - 1.9e-11 43.9 0.7 2.2e-11 43.7 0.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF48511 - 5.3e-08 32.5 0.1 5.4e-08 32.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF48511 - 0.0002 20.8 0.1 0.00022 20.6 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF48511 - 0.00035 19.5 0.1 0.00037 19.4 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF48511 - 0.0097 15.9 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF48511 - 0.026 14.1 0.9 0.054 13.1 0.9 1.6 1 1 1 2 2 2 0 Choline/ethanolamine kinase Kinase-like PF14531.6 ORF48511 - 0.043 13.1 0.0 0.052 12.8 0.0 1.1 1 0 0 1 1 1 0 Kinase-like CNPase PF05881.12 ORF4789 - 0.066 12.8 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) Zf_RING PF16744.5 ORF46924 - 0.097 12.8 0.5 0.16 12.1 0.2 1.5 2 0 0 2 2 2 0 KIAA1045 RING finger Ank_4 PF13637.6 ORF46909 - 9.4e-26 89.9 0.0 8.1e-10 39.0 0.0 2.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF46909 - 3.7e-20 71.7 0.0 3.3e-07 30.4 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF46909 - 2.2e-19 69.8 0.0 2.9e-19 69.4 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF46909 - 2.9e-18 64.0 0.0 2.9e-05 24.1 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF46909 - 2.4e-11 43.5 0.0 0.00039 20.7 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ras PF00071.22 ORF45333 - 1.9e-20 73.1 0.1 2.7e-20 72.6 0.1 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF45333 - 1.6e-18 67.1 0.0 1.9e-18 66.8 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF45333 - 3.1e-05 23.5 0.1 4.3e-05 23.0 0.0 1.3 1 1 1 2 2 2 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF45333 - 0.0003 20.9 0.0 0.00045 20.3 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase TsaE PF02367.17 ORF45333 - 0.00079 19.4 0.0 0.00086 19.3 0.0 1.0 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE TniB PF05621.11 ORF45333 - 0.0058 16.1 0.0 0.0069 15.8 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein G-alpha PF00503.20 ORF45333 - 0.023 13.8 0.0 0.034 13.3 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit AAA_16 PF13191.6 ORF45333 - 0.025 14.9 0.0 0.029 14.7 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain TylF PF05711.11 ORF45333 - 0.034 13.4 0.1 0.048 12.9 0.1 1.1 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) MCM PF00493.23 ORF45333 - 0.036 13.2 0.0 0.04 13.0 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain Gtr1_RagA PF04670.12 ORF45333 - 0.06 12.7 0.0 0.085 12.2 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Sigma54_activat PF00158.26 ORF45333 - 0.067 12.9 0.0 0.075 12.7 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain HMW1C_N PF18071.1 ORF44927 - 0.012 15.4 0.3 0.015 15.1 0.3 1.2 1 0 0 1 1 1 0 HMW1C N-terminal DUF1129 PF06570.11 ORF44774 - 0.36 10.3 3.6 1.3 8.4 3.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3438 PF11920.8 ORF44549 - 0.14 11.4 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) KKLCAg1 PF15204.6 ORF44203 - 0.017 15.2 0.0 1.7 8.8 0.0 2.1 2 0 0 2 2 2 0 Kita-kyushu lung cancer antigen 1 DUF4088 PF13317.6 ORF44203 - 0.16 11.5 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4088) Acyl_transf_3 PF01757.22 ORF43823 - 0.00018 20.7 0.2 0.00023 20.4 0.2 1.1 1 0 0 1 1 1 1 Acyltransferase family NnrU PF07298.11 ORF43823 - 0.031 13.8 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 NnrU protein zf-C4_Topoisom PF01396.19 ORF43288 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger CsgA PF17334.2 ORF42336 - 0.054 14.2 0.3 0.093 13.5 0.2 1.5 1 1 0 1 1 1 0 Minor curli fiber component A DUF4130 PF13566.6 ORF42310 - 0.77 9.8 5.9 0.94 9.5 5.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4130 YBD PF17725.1 ORF42272 - 0.099 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 YAP binding domain DUF573 PF04504.14 ORF41462 - 0.069 13.8 0.0 4.8 7.9 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function, DUF573 YacG PF03884.14 ORF41094 - 0.21 11.3 3.3 0.24 11.2 1.0 1.9 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG MPDZ_u10 PF16667.5 ORF40866 - 0.073 14.0 1.4 0.073 14.0 1.4 1.7 1 1 0 1 1 1 0 Unstructured region 10 on multiple PDZ protein Methyltranf_PUA PF13636.6 ORF40248 - 3e-07 30.3 0.0 5.3e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 RNA-binding PUA-like domain of methyltransferase RsmF YBD PF17725.1 ORF39638 - 0.13 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 YAP binding domain DPM3 PF08285.11 ORF39412 - 0.31 11.3 2.7 0.66 10.2 0.5 2.0 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) UCH PF00443.29 ORF39289 - 2.2e-08 33.9 4.4 3.1e-08 33.4 4.4 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF3712 PF12505.8 ORF39289 - 0.052 13.8 0.0 0.058 13.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3712) DUF4909 PF16253.5 ORF386 - 0.021 14.6 0.4 0.025 14.4 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4909) DNA_pol3_a_NII PF11490.8 ORF386 - 0.025 14.5 2.1 0.035 14.0 2.1 1.2 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II Fer4 PF00037.27 ORF38399 - 0.33 10.8 1.9 9.4 6.2 0.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain TMEM95 PF15203.6 ORF38022 - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 TMEM95 family MMTV_SAg PF01054.17 ORF38022 - 0.23 11.0 0.1 0.31 10.6 0.1 1.1 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen ATP-synt_F6 PF05511.11 ORF37522 - 0.064 13.7 0.1 0.071 13.5 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase coupling factor 6 DUF1803 PF08820.10 ORF36893 - 0.0063 16.5 0.7 0.0081 16.2 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1803) RFC1 PF08519.12 ORF36893 - 0.046 13.9 5.7 0.051 13.7 5.7 1.1 1 0 0 1 1 1 0 Replication factor RFC1 C terminal domain Tachystatin_B PF11478.8 ORF36641 - 1.2 9.1 4.3 1.6 8.7 1.3 2.1 1 1 1 2 2 2 0 Antimicrobial chitin binding protein tachystatin B DIOX_N PF14226.6 ORF36135 - 0.047 14.5 0.1 0.089 13.6 0.1 1.5 1 1 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal AIB PF15334.6 ORF36010 - 0.11 11.8 0.7 0.13 11.6 0.7 1.1 1 0 0 1 1 1 0 Aurora kinase A and ninein interacting protein TLV_coat PF00429.19 ORF35750 - 0.024 13.3 0.1 0.024 13.3 0.1 1.0 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) ERGIC_N PF13850.6 ORF35181 - 0.043 14.2 0.2 0.057 13.8 0.2 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF645 PF04875.12 ORF35181 - 0.1 12.6 0.2 0.18 11.9 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF645 GATA PF00320.27 ORF34392 - 0.0063 16.1 1.3 0.0063 16.1 1.3 2.1 2 0 0 2 2 2 1 GATA zinc finger Thioredoxin_6 PF13848.6 ORF34034 - 0.00028 20.9 0.0 0.0003 20.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 ORF34034 - 0.0024 17.8 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin DUF1776 PF08643.10 ORF34034 - 0.03 13.7 0.0 0.03 13.7 0.0 1.0 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Thioredoxin_8 PF13905.6 ORF34034 - 0.031 14.6 0.0 0.046 14.1 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like SieB PF14163.6 ORF32111 - 0.0046 16.5 0.6 0.0067 15.9 0.4 1.3 1 1 0 1 1 1 1 Super-infection exclusion protein B Ribosomal_L23 PF00276.20 ORF31802 - 4.6e-31 107.0 4.3 5.3e-31 106.8 4.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L23 ubiquitin PF00240.23 ORF31802 - 0.0023 17.6 0.2 0.0034 17.1 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin family WHEP-TRS PF00458.20 ORF31802 - 0.05 13.8 1.9 0.13 12.5 1.9 1.7 1 0 0 1 1 1 0 WHEP-TRS domain P16-Arc PF04699.14 ORF31802 - 0.065 13.7 0.5 0.08 13.4 0.5 1.1 1 0 0 1 1 1 0 ARP2/3 complex 16 kDa subunit (p16-Arc) DnaJ PF00226.31 ORF31802 - 0.15 12.2 0.3 0.34 11.1 0.1 1.7 2 0 0 2 2 2 0 DnaJ domain MerR PF00376.23 ORF31127 - 0.049 13.4 0.7 0.082 12.7 0.7 1.3 1 0 0 1 1 1 0 MerR family regulatory protein Gyro_capsid PF04162.12 ORF30992 - 0.15 10.5 0.0 0.15 10.5 0.0 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) Taxilin PF09728.9 ORF29375 - 0.0021 17.3 9.2 0.0026 17.0 9.2 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein CHDCT2 PF08074.11 ORF29375 - 0.0094 16.1 0.8 0.011 16.0 0.8 1.1 1 0 0 1 1 1 1 CHDCT2 (NUC038) domain HemX PF04375.14 ORF29375 - 0.01 15.2 1.9 0.012 15.0 1.9 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase CENP-H PF05837.12 ORF29375 - 0.015 15.7 5.4 0.018 15.5 5.4 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) L27_1 PF09058.10 ORF29375 - 0.021 14.8 4.2 0.16 12.0 4.2 2.2 1 1 0 1 1 1 0 L27_1 DUF445 PF04286.12 ORF29375 - 0.037 13.8 2.6 0.04 13.7 2.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF445) DUF5082 PF16888.5 ORF29375 - 0.12 12.7 6.3 1.8 8.9 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) APOBEC4 PF18775.1 ORF29375 - 0.2 11.9 0.8 0.66 10.2 0.2 2.0 1 1 1 2 2 2 0 APOBEC4 FapA PF03961.13 ORF29375 - 0.3 9.7 5.8 0.33 9.5 5.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A TMPIT PF07851.13 ORF29375 - 0.35 10.1 4.5 0.36 10.0 4.5 1.0 1 0 0 1 1 1 0 TMPIT-like protein COX16 PF14138.6 ORF29375 - 0.65 10.5 4.7 0.78 10.3 4.7 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 PhoU PF01895.19 ORF29375 - 0.96 10.0 7.8 6 7.4 1.6 2.1 1 1 1 2 2 2 0 PhoU domain DUF4140 PF13600.6 ORF29375 - 2.7 8.5 6.5 7.9 7.0 0.7 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF4606 PF15379.6 ORF29342 - 0.012 15.8 4.4 0.014 15.7 4.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4606) ATPase PF06745.13 ORF28714 - 0.18 11.1 0.1 0.21 10.9 0.1 1.1 1 0 0 1 1 1 0 KaiC Septin PF00735.18 ORF28446 - 0.0021 17.4 0.3 0.0023 17.3 0.3 1.0 1 0 0 1 1 1 1 Septin Cation_ATPase_C PF00689.21 ORF28382 - 1.2e-11 44.7 0.1 1.2e-11 44.7 0.1 1.0 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus TetR_C_19 PF17924.1 ORF28370 - 0.22 12.1 7.5 0.84 10.2 7.2 1.9 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Kelch_2 PF07646.15 ORF28196 - 0.00055 19.8 0.1 0.2 11.7 0.0 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF28196 - 0.01 15.4 0.3 0.023 14.3 0.3 1.6 1 0 0 1 1 1 0 Kelch motif Kelch_6 PF13964.6 ORF28196 - 0.012 15.9 0.1 4.3 7.8 0.0 2.2 2 0 0 2 2 2 0 Kelch motif GED PF02212.18 ORF27810 - 2.4e-16 59.7 0.8 3.2e-16 59.3 0.8 1.2 1 0 0 1 1 1 1 Dynamin GTPase effector domain ZFYVE21_C PF16696.5 ORF27810 - 0.063 13.1 0.1 0.081 12.8 0.1 1.2 1 0 0 1 1 1 0 Zinc finger FYVE domain-containing protein 21 C-terminus Mur_ligase PF01225.25 ORF27172 - 0.07 13.5 0.0 0.32 11.4 0.0 1.8 1 1 1 2 2 2 0 Mur ligase family, catalytic domain Peptidase_S10 PF00450.22 ORF27172 - 0.076 12.4 0.0 3.3 7.0 0.0 2.0 1 1 1 2 2 2 0 Serine carboxypeptidase RecX PF02631.16 ORF27172 - 0.16 12.4 0.0 0.56 10.7 0.0 1.7 2 0 0 2 2 2 0 RecX family ADP_ribosyl_GH PF03747.14 ORF26274 - 7.3e-13 48.9 0.2 9.9e-13 48.5 0.2 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Ribosomal_L32p PF01783.23 ORF25959 - 0.0056 16.9 1.8 0.4 11.0 1.0 2.7 2 1 0 2 2 2 2 Ribosomal L32p protein family DUF5326 PF17260.2 ORF25524 - 0.08 13.1 1.2 0.1 12.7 1.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5326) SCP1201-deam PF14428.6 ORF25506 - 0.044 13.6 0.6 0.053 13.4 0.6 1.1 1 0 0 1 1 1 0 SCP1.201-like deaminase Peptidase_S55 PF05580.12 ORF25506 - 0.31 11.0 4.4 0.33 10.9 4.4 1.0 1 0 0 1 1 1 0 SpoIVB peptidase S55 LMBR1 PF04791.16 ORF25506 - 4.2 6.2 5.6 4.1 6.2 5.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein zf-C4_Topoisom PF01396.19 ORF25341 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger MFS_1 PF07690.16 ORF24632 - 3.5e-07 29.5 3.3 3.7e-07 29.4 3.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily UNC-93 PF05978.16 ORF24632 - 0.015 15.0 3.8 0.015 15.0 3.8 1.3 1 1 0 1 1 1 0 Ion channel regulatory protein UNC-93 Cyclin PF08613.11 ORF23679 - 5e-06 27.0 0.0 6.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF23679 - 0.00022 20.9 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Pox_E10 PF04805.12 ORF23679 - 0.08 12.8 0.4 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 E10-like protein conserved region PI3K_1B_p101 PF10486.9 ORF23535 - 0.095 10.5 2.6 0.098 10.4 2.6 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit RR_TM4-6 PF06459.12 ORF23535 - 1.2 8.9 13.6 1.2 8.9 13.6 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 MCM_bind PF09739.9 ORF23535 - 1.3 7.4 8.4 1.3 7.4 8.4 1.0 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor RNA_pol_Rpc4 PF05132.14 ORF23535 - 3.7 8.0 9.9 4 7.9 9.9 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 NARP1 PF12569.8 ORF23535 - 5.8 5.7 13.7 6.1 5.6 13.7 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TMEM214 PF10151.9 ORF23535 - 9.5 4.5 12.7 10 4.4 12.7 1.0 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator SNARE PF05739.19 ORF2346 - 2.5e-06 27.4 0.1 2.5e-06 27.4 0.1 1.7 2 0 0 2 2 2 1 SNARE domain Use1 PF09753.9 ORF2346 - 0.00018 21.3 2.0 0.00022 21.0 2.0 1.0 1 0 0 1 1 1 1 Membrane fusion protein Use1 Prominin PF05478.11 ORF2346 - 0.0074 14.3 0.3 0.0081 14.2 0.3 1.0 1 0 0 1 1 1 1 Prominin ERGIC_N PF13850.6 ORF2346 - 0.012 15.9 0.9 0.012 15.9 0.9 1.6 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF16 PF01519.16 ORF2346 - 0.02 15.4 4.1 0.027 14.9 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 COG5 PF10392.9 ORF2346 - 0.037 14.2 0.3 0.04 14.1 0.3 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 RmuC PF02646.16 ORF2346 - 0.07 12.2 0.9 0.077 12.1 0.9 1.0 1 0 0 1 1 1 0 RmuC family AAA_32 PF13654.6 ORF22673 - 0.022 13.6 0.2 0.03 13.1 0.2 1.1 1 0 0 1 1 1 0 AAA domain oligo_HPY PF08352.12 ORF22424 - 1.7e-09 38.1 0.0 2.1e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region CD20 PF04103.15 ORF22259 - 0.01 15.9 0.1 0.015 15.4 0.0 1.3 1 1 0 1 1 1 0 CD20-like family NicO PF03824.16 ORF22259 - 0.015 14.7 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 High-affinity nickel-transport protein DUF588 PF04535.12 ORF22259 - 0.037 13.8 0.0 0.043 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF588) Protocadherin PF08374.11 ORF22259 - 0.064 13.2 0.0 0.087 12.8 0.0 1.2 1 1 0 1 1 1 0 Protocadherin VPS9 PF02204.18 ORF22259 - 0.072 13.3 0.2 0.098 12.9 0.2 1.2 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain Vpu PF00558.19 ORF22259 - 0.073 12.8 0.1 0.1 12.4 0.1 1.2 1 0 0 1 1 1 0 Vpu protein SIT PF15330.6 ORF22259 - 0.079 13.4 0.1 0.1 13.0 0.1 1.1 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT EF-hand_6 PF13405.6 ORF20958 - 5.4e-09 35.3 1.0 0.00078 19.2 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF20958 - 2.8e-07 29.6 0.2 0.034 13.7 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF20958 - 5.4e-06 26.8 1.8 0.00012 22.4 0.7 2.7 2 1 0 2 2 2 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF20958 - 0.0063 16.8 0.0 0.01 16.2 0.0 1.3 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_5 PF13202.6 ORF20958 - 0.016 14.7 0.3 1.9 8.1 0.1 3.1 3 0 0 3 3 3 0 EF hand EF-hand_8 PF13833.6 ORF20958 - 0.068 13.0 1.3 5.3 7.0 0.0 2.7 2 1 1 3 3 3 0 EF-hand domain pair DUF4692 PF15763.5 ORF20232 - 0.041 14.4 4.9 0.054 14.0 4.9 1.1 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) V_ATPase_I PF01496.19 ORF20232 - 1 7.2 4.1 1.1 7.1 4.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Pox_Ag35 PF03286.14 ORF20232 - 2.2 8.0 16.8 2.7 7.8 16.8 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein zf-C4_Topoisom PF01396.19 ORF20027 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger CobW_C PF07683.14 ORF19558 - 3.6e-18 65.3 0.0 4.4e-18 65.0 0.0 1.0 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain DbpA PF03880.15 ORF19523 - 0.046 13.7 0.0 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 DbpA RNA binding domain Ank_2 PF12796.7 ORF19327 - 4.3e-09 36.8 0.0 6.7e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF19327 - 9.4e-09 35.3 0.0 6.6e-06 26.3 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF19327 - 1e-07 31.6 0.0 0.00032 20.9 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF19327 - 2.3e-07 30.9 0.0 3.6e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF19327 - 6.2e-07 29.9 0.0 1.7e-05 25.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) PapC_N PF13954.6 ORF17782 - 0.036 14.1 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 PapC N-terminal domain Septin PF00735.18 ORF17214 - 0.0021 17.4 0.3 0.0023 17.3 0.3 1.0 1 0 0 1 1 1 1 Septin DUF4201 PF13870.6 ORF15185 - 0.0093 15.7 0.5 0.011 15.5 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) FHA_2 PF17913.1 ORF15185 - 0.019 15.2 0.1 0.022 15.0 0.1 1.2 1 0 0 1 1 1 0 FHA domain CitX PF03802.14 ORF15185 - 0.04 13.7 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ZapB PF06005.12 ORF15185 - 0.063 13.7 0.2 0.084 13.3 0.2 1.3 1 0 0 1 1 1 0 Cell division protein ZapB DMPK_coil PF08826.10 ORF15185 - 0.083 13.0 0.6 0.12 12.4 0.6 1.3 1 0 0 1 1 1 0 DMPK coiled coil domain like TFIID_20kDa PF03847.13 ORF15185 - 0.091 13.3 2.9 0.6 10.7 2.5 2.3 1 1 0 1 1 1 0 Transcription initiation factor TFIID subunit A PRK PF00485.18 ORF14107 - 0.00033 20.5 0.1 0.00034 20.4 0.1 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Syntaxin PF00804.25 ORF14107 - 0.0029 17.3 6.2 0.0035 17.0 5.0 1.6 1 1 1 2 2 2 2 Syntaxin DUF1759 PF03564.15 ORF14107 - 0.0093 15.9 0.6 0.012 15.5 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) Nup84_Nup100 PF04121.13 ORF14107 - 0.023 12.8 3.8 0.026 12.6 3.8 1.0 1 0 0 1 1 1 0 Nuclear pore protein 84 / 107 SoDot-IcmSS PF16848.5 ORF14107 - 0.034 14.1 3.6 0.047 13.7 3.6 1.2 1 0 0 1 1 1 0 Substrate of the Dot/Icm secretion system, putative Adenine_glyco PF03352.13 ORF14107 - 0.039 13.7 1.6 0.044 13.6 1.6 1.1 1 0 0 1 1 1 0 Methyladenine glycosylase CotJB PF12652.7 ORF14107 - 0.06 13.6 0.4 0.092 13.0 0.4 1.3 1 0 0 1 1 1 0 CotJB protein DUF948 PF06103.11 ORF14107 - 0.17 12.2 2.7 0.31 11.3 2.0 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) MCU PF04678.13 ORF14107 - 0.22 11.6 2.3 0.26 11.4 2.3 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter HAD_SAK_1 PF10307.9 ORF14107 - 0.31 10.8 6.8 0.37 10.6 6.8 1.1 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins Atg14 PF10186.9 ORF14107 - 0.81 8.7 6.2 0.96 8.5 6.2 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF14107 - 0.97 10.0 6.3 1.5 9.4 6.3 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region 7tm_7 PF08395.12 ORF13460 - 0.0069 15.6 2.0 0.0073 15.6 2.0 1.0 1 0 0 1 1 1 1 7tm Chemosensory receptor CD45 PF12567.8 ORF12965 - 0.1 12.6 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Leukocyte receptor CD45 zf-C4_Topoisom PF01396.19 ORF12656 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Oxidored_q2 PF00420.24 ORF11278 - 0.0088 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Utp12 PF04003.12 ORF111145 - 0.078 13.3 1.8 0.1 13.0 1.8 1.5 1 1 0 1 1 1 0 Dip2/Utp12 Family Cyclin PF08613.11 ORF111016 - 5e-06 27.0 0.0 6.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF111016 - 0.00022 20.9 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Pox_E10 PF04805.12 ORF111016 - 0.08 12.8 0.4 0.11 12.3 0.2 1.4 1 1 0 1 1 1 0 E10-like protein conserved region Oxidored_q2 PF00420.24 ORF110735 - 0.0088 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CSTF1_dimer PF16699.5 ORF109931 - 0.15 11.9 0.3 0.3 10.9 0.2 1.6 1 1 0 1 1 1 0 Cleavage stimulation factor subunit 1, dimerisation domain DUF4817 PF16087.5 ORF109931 - 0.16 11.8 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) GABP-alpha PF11620.8 ORF109931 - 0.25 11.5 0.0 0.35 11.1 0.0 1.1 1 0 0 1 1 1 0 GA-binding protein alpha chain WD-3 PF09765.9 ORF10984 - 0.089 12.1 0.0 0.096 12.0 0.0 1.0 1 0 0 1 1 1 0 WD-repeat region EcoRI PF02963.16 ORF10984 - 0.1 11.6 0.0 0.1 11.6 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease EcoRI CSD PF00313.22 ORF109761 - 8.2e-18 64.0 0.3 1.1e-17 63.7 0.3 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF109761 - 0.0093 15.6 0.5 0.016 14.9 0.5 1.5 1 0 0 1 1 1 1 Ribonuclease B OB domain zf-C4_Topoisom PF01396.19 ORF109691 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger DUF3736 PF12540.8 ORF109343 - 0.12 12.5 0.4 0.14 12.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3736) BBS2_Mid PF14783.6 ORF108629 - 0.011 15.8 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, middle region DIOX_N PF14226.6 ORF108318 - 0.047 14.5 0.1 0.089 13.6 0.1 1.5 1 1 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal EamA PF00892.20 ORF108215 - 1.2e-05 25.5 13.3 1.5e-05 25.2 13.3 1.0 1 0 0 1 1 1 1 EamA-like transporter family FANCI_HD1 PF14679.6 ORF108215 - 0.059 13.3 0.3 0.44 10.5 0.0 2.1 1 1 1 2 2 2 0 FANCI helical domain 1 YibE_F PF07907.11 ORF108215 - 0.59 9.6 12.5 0.63 9.5 10.8 1.7 1 1 1 2 2 2 0 YibE/F-like protein Glyco_hydro_19 PF00182.19 ORF107717 - 0.016 15.1 0.1 0.017 15.0 0.1 1.1 1 0 0 1 1 1 0 Chitinase class I Med12-PQL PF12144.8 ORF107717 - 0.054 13.4 0.4 0.055 13.3 0.4 1.0 1 0 0 1 1 1 0 Eukaryotic Mediator 12 catenin-binding domain Orf78 PF06024.12 ORF107717 - 1.4 9.3 6.3 3.9 7.8 6.3 1.8 1 1 0 1 1 1 0 Orf78 (ac78) DUF3675 PF12428.8 ORF107717 - 2 9.0 4.0 2.1 8.9 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3675) DUF1764 PF08576.10 ORF107717 - 3.6 8.6 9.0 4.6 8.2 9.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF1764) Bax1-I PF01027.20 ORF106519 - 3.4e-05 23.8 0.2 4.5e-05 23.4 0.2 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 zf-C4_Topoisom PF01396.19 ORF104887 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Sin3_corepress PF08295.12 ORF104514 - 0.0034 17.4 1.5 0.0037 17.3 0.4 1.7 2 0 0 2 2 2 1 Sin3 family co-repressor Eapp_C PF10238.9 ORF103927 - 0.049 13.7 4.3 0.06 13.4 4.3 1.2 1 0 0 1 1 1 0 E2F-associated phosphoprotein BIRC6 PF12356.8 ORF103927 - 0.067 12.6 0.2 0.078 12.4 0.2 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 SWIRM-assoc_2 PF16496.5 ORF103927 - 1.4 7.7 6.6 1.2 7.9 6.6 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal MAJIN PF15077.6 ORF103927 - 1.9 8.2 6.4 1.9 8.2 6.4 1.0 1 0 0 1 1 1 0 Membrane-anchored junction protein AAA_26 PF13500.6 ORF103824 - 0.0002 21.3 0.0 0.00022 21.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_31 PF13614.6 ORF103824 - 0.00065 19.7 0.0 0.00081 19.3 0.0 1.2 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 ORF103824 - 0.0046 16.2 0.1 0.39 9.9 0.0 2.0 1 1 1 2 2 2 2 Anion-transporting ATPase ParA PF10609.9 ORF103824 - 0.016 14.7 0.0 0.017 14.6 0.0 1.0 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase DUF4175 PF13779.6 ORF101974 - 0.0029 15.6 2.2 0.0034 15.4 2.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4175) tRNA-synt_1 PF00133.22 ORF101974 - 0.021 13.1 0.1 0.023 12.9 0.1 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) FlxA PF14282.6 ORF101974 - 0.053 13.5 0.2 0.063 13.3 0.2 1.1 1 0 0 1 1 1 0 FlxA-like protein Enkurin PF13864.6 ORF101974 - 0.11 12.9 4.5 0.29 11.6 4.5 1.7 1 1 0 1 1 1 0 Calmodulin-binding CtaG_Cox11 PF04442.14 ORF101414 - 4.2e-25 88.5 0.5 5e-25 88.3 0.5 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 CX PF01705.19 ORF100860 - 0.11 13.0 6.3 0.35 11.4 0.0 2.8 2 1 0 2 2 2 0 CX module DUF2992 PF11208.8 ORF100026 - 0.054 13.7 1.2 0.069 13.4 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) PIG-H PF10181.9 ORF100026 - 0.093 12.6 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 GPI-GlcNAc transferase complex, PIG-H component LBP_M PF17385.2 ORF100026 - 0.1 12.1 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Lacto-N-biose phosphorylase central domain CdiI_3 PF18616.1 NODE_57368_length_295_cov_1.738462_g49429_i0reverse_frame_1 - 0.091 12.7 0.1 0.32 10.9 0.0 1.8 1 1 1 2 2 2 0 CDI immunity proteins Takusan PF04822.13 NODE_57366_length_295_cov_1.846154_g49427_i0reverse_frame_1 - 0.019 14.9 3.6 0.025 14.4 3.6 1.1 1 0 0 1 1 1 0 Takusan TMEM43 PF07787.12 NODE_57366_length_295_cov_1.846154_g49427_i0forward_frame_1 - 0.97 8.8 2.4 1 8.7 2.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 Herpes_LMP1 PF05297.11 NODE_57362_length_295_cov_1.942308_g49423_i0forward_frame_1 - 2.2 7.4 8.7 2.4 7.3 8.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) PRA1 PF03208.19 NODE_57362_length_295_cov_1.942308_g49423_i0forward_frame_1 - 2.3 7.8 9.2 2.8 7.6 9.2 1.1 1 0 0 1 1 1 0 PRA1 family protein Ribosomal_L24e PF01246.20 NODE_57361_length_295_cov_2.034615_g49422_i0reverse_frame_1 - 0.0077 16.4 0.5 0.011 15.9 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L24e V-ATPase_H_C PF11698.8 NODE_57355_length_295_cov_2.150000_g49416_i0reverse_frame_1 - 3.1e-07 30.5 0.2 0.021 14.9 0.0 2.1 2 0 0 2 2 2 2 V-ATPase subunit H Adaptin_N PF01602.20 NODE_57355_length_295_cov_2.150000_g49416_i0reverse_frame_1 - 0.00015 20.5 1.5 0.00017 20.3 1.5 1.0 1 0 0 1 1 1 1 Adaptin N terminal region SAM_3 PF18016.1 NODE_57355_length_295_cov_2.150000_g49416_i0reverse_frame_1 - 0.093 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) zf-UBR PF02207.20 NODE_57352_length_295_cov_2.180769_g49413_i0forward_frame_1 - 0.013 15.7 2.2 0.023 14.8 2.2 1.4 1 0 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) KleE PF17394.2 NODE_57350_length_295_cov_2.365385_g49411_i0forward_frame_1 - 0.32 11.2 2.1 0.38 11.0 2.1 1.2 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein TFIIS_C PF01096.18 NODE_57348_length_295_cov_2.415385_g49409_i0reverse_frame_1 - 0.024 14.5 0.3 0.047 13.6 0.3 1.6 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) Ndr PF03096.14 NODE_57343_length_295_cov_2.653846_g49404_i0forward_frame_1 - 0.04 12.6 0.1 0.046 12.4 0.1 1.1 1 0 0 1 1 1 0 Ndr family V_ATPase_I PF01496.19 NODE_57341_length_295_cov_2.750000_g49402_i0forward_frame_1 - 3.6e-30 104.6 4.3 4e-30 104.5 4.3 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF3270 PF11674.8 NODE_57321_length_295_cov_42.050000_g49382_i0forward_frame_1 - 2.9 8.1 9.6 0.13 12.5 4.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3270) Nop14 PF04147.12 NODE_57319_length_295_cov_48.430769_g49380_i0reverse_frame_1 - 0.093 10.9 0.1 0.11 10.7 0.1 1.0 1 0 0 1 1 1 0 Nop14-like family DUF5554 PF17709.1 NODE_57318_length_295_cov_51.076923_g49379_i0forward_frame_1 - 0.11 12.6 0.5 0.16 12.1 0.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5554) MMR_HSR1_Xtn PF16897.5 NODE_57314_length_295_cov_55.473077_g49375_i0reverse_frame_1 - 0.033 14.2 0.2 0.047 13.7 0.2 1.4 1 1 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Exo_endo_phos PF03372.23 NODE_57314_length_295_cov_55.473077_g49375_i0reverse_frame_1 - 0.25 10.8 0.0 0.29 10.6 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Pox_Ag35 PF03286.14 NODE_57313_length_295_cov_56.192308_g49374_i0forward_frame_1 - 1.8 8.3 21.9 2.1 8.1 21.9 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein PNISR PF15996.5 NODE_57313_length_295_cov_56.192308_g49374_i0forward_frame_1 - 4.9 7.4 17.7 5.4 7.2 17.7 1.0 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR Roughex PF06020.11 NODE_57313_length_295_cov_56.192308_g49374_i0forward_frame_1 - 5 6.1 9.4 5.5 6.0 9.4 1.2 1 0 0 1 1 1 0 Drosophila roughex protein DUF1155 PF06633.11 NODE_57312_length_295_cov_57.565385_g49373_i0reverse_frame_1 - 0.052 13.0 0.9 2.6 7.6 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1155) MFS_1 PF07690.16 NODE_57304_length_295_cov_68.934615_g49365_i0reverse_frame_1 - 0.00067 18.7 0.0 0.00067 18.7 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily BT1 PF03092.16 NODE_57304_length_295_cov_68.934615_g49365_i0reverse_frame_1 - 0.056 11.7 0.0 0.056 11.7 0.0 1.0 1 0 0 1 1 1 0 BT1 family IBV_3B PF03622.13 NODE_57304_length_295_cov_68.934615_g49365_i0forward_frame_1 - 0.038 14.1 0.0 0.057 13.6 0.0 1.3 1 0 0 1 1 1 0 IBV 3B protein DUF2222 PF09984.9 NODE_57301_length_295_cov_75.950000_g49362_i0reverse_frame_1 - 0.064 13.1 0.6 0.63 9.9 0.0 2.0 1 1 1 2 2 2 0 Uncharacterised signal transduction histidine kinase domain (DUF2222) Pox_D5 PF03288.16 NODE_57292_length_295_cov_94.969231_g49353_i0reverse_frame_1 - 0.0052 17.3 0.2 0.017 15.6 0.0 1.8 2 0 0 2 2 2 1 Poxvirus D5 protein-like Dscam_C PF12355.8 NODE_57286_length_295_cov_178.469231_g49347_i0reverse_frame_1 - 0.38 11.7 4.4 0.48 11.4 4.4 1.2 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal DUF4201 PF13870.6 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 2.2e-07 30.8 3.1 2.2e-07 30.8 3.1 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4201) HALZ PF02183.18 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 0.0049 17.1 0.9 0.0049 17.1 0.9 1.9 3 0 0 3 3 3 1 Homeobox associated leucine zipper DivIC PF04977.15 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 0.023 14.4 2.6 0.023 14.4 2.6 1.9 1 1 1 2 2 2 0 Septum formation initiator SWI-SNF_Ssr4 PF08549.10 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 0.072 11.7 1.0 0.073 11.7 1.0 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) Ly49 PF08391.10 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 1.2 9.6 6.0 0.64 10.4 3.8 1.7 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region DUF2259 PF10016.9 NODE_57283_length_295_cov_209.153846_g49344_i0reverse_frame_1 - 0.12 12.3 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Predicted secreted protein (DUF2259) NinF PF05810.12 NODE_57279_length_295_cov_309.357692_g49340_i0forward_frame_1 - 0.12 12.3 0.1 0.26 11.2 0.1 1.5 1 0 0 1 1 1 0 NinF protein DUF2950 PF11453.8 NODE_57277_length_295_cov_327.303846_g49338_i0reverse_frame_1 - 0.027 13.7 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2950) U1snRNP70_N PF12220.8 NODE_57274_length_295_cov_844.026923_g49335_i0forward_frame_1 - 0.0002 21.9 0.3 0.00026 21.5 0.3 1.2 1 0 0 1 1 1 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Roc PF08477.13 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 2.1e-09 37.6 0.0 2.8e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 8e-08 32.0 0.0 9.8e-08 31.8 0.0 1.1 1 0 0 1 1 1 1 Ras family Arf PF00025.21 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 0.0019 17.7 0.0 0.002 17.6 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family TniB PF05621.11 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 0.028 13.8 0.0 0.031 13.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein AAA_7 PF12775.7 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 0.086 12.3 0.0 0.094 12.2 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region RE_TaqI PF09573.10 NODE_57259_length_296_cov_1.310345_g49320_i0forward_frame_1 - 0.096 12.5 0.5 0.098 12.4 0.5 1.1 1 0 0 1 1 1 0 TaqI restriction endonuclease TPR_1 PF00515.28 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 2.4e-09 36.6 0.0 5.8e-05 22.7 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 7e-09 35.2 0.3 1.5e-05 24.8 0.0 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 3.3e-07 30.2 0.0 6.9e-06 26.1 0.1 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 2e-05 24.2 0.0 0.17 11.6 0.0 2.3 2 0 0 2 2 2 2 TPR repeat TPR_2 PF07719.17 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 0.00019 21.3 0.6 0.16 12.2 0.0 2.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 0.001 19.3 0.0 0.0019 18.5 0.0 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 0.17 12.6 0.0 0.2 12.3 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_20 PF14561.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 0.22 11.9 0.0 0.29 11.5 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat Podoplanin PF05808.11 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 3.9e-06 27.0 3.9 5.3e-06 26.6 3.9 1.2 1 0 0 1 1 1 1 Podoplanin TMEM154 PF15102.6 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 2.3e-05 24.4 0.5 2.5e-05 24.2 0.5 1.1 1 0 0 1 1 1 1 TMEM154 protein family Rax2 PF12768.7 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 4.3e-05 23.1 0.0 4.7e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Cortical protein marker for cell polarity Glycophorin_A PF01102.18 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.00046 20.4 0.3 0.00075 19.7 0.3 1.4 1 1 0 1 1 1 1 Glycophorin A DUF4711 PF15829.5 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.0039 17.2 0.3 0.0047 16.9 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4711) TMEM51 PF15345.6 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.004 17.0 0.1 0.0044 16.9 0.1 1.0 1 0 0 1 1 1 1 Transmembrane protein 51 Orf78 PF06024.12 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.0073 16.6 0.0 0.0092 16.3 0.0 1.2 1 0 0 1 1 1 1 Orf78 (ac78) DUF1616 PF07760.11 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.029 13.7 0.0 0.032 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) EssA PF10661.9 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.083 12.7 0.6 0.11 12.3 0.6 1.2 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA DUF2771 PF10969.8 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.17 11.9 0.7 1.6 8.8 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2771) SSP160 PF06933.11 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.22 9.7 6.4 0.21 9.8 6.4 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 ETRAMP PF09716.10 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.22 11.6 3.8 0.38 10.8 3.8 1.5 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) BNIP3 PF06553.12 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.22 11.2 1.8 0.22 11.2 0.4 1.7 1 1 0 1 1 1 0 BNIP3 Flp1_like PF16982.5 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.28 10.6 7.5 0.11 12.0 4.6 1.8 1 1 1 2 2 2 0 Putative Flagellin, Flp1-like, domain Ice_nucleation PF00818.17 NODE_57243_length_296_cov_1.685824_g49304_i0forward_frame_1 - 0.018 15.1 0.4 0.043 13.9 0.4 1.7 1 0 0 1 1 1 0 Ice nucleation protein repeat GP3 PF03076.14 NODE_57242_length_296_cov_1.693487_g49303_i0reverse_frame_1 - 0.053 13.6 0.8 0.058 13.4 0.8 1.0 1 0 0 1 1 1 0 Equine arteritis virus GP3 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks238.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks238.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks238.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks238.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:05:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ANAPC4_WD40 PF12894.7 NODE_57238_length_296_cov_1.823755_g49299_i0forward_frame_1 - 0.0088 16.3 0.0 0.013 15.7 0.0 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 NODE_57238_length_296_cov_1.823755_g49299_i0forward_frame_1 - 0.074 12.9 0.1 0.093 12.6 0.1 1.3 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A PX PF00787.24 NODE_57229_length_296_cov_1.973180_g49290_i0reverse_frame_1 - 2.8e-13 49.8 0.1 3.2e-13 49.6 0.1 1.0 1 0 0 1 1 1 1 PX domain T_cell_tran_alt PF15128.6 NODE_57223_length_296_cov_2.249042_g49284_i0reverse_frame_1 - 0.26 11.1 1.3 0.34 10.7 1.0 1.4 1 1 0 1 1 1 0 T-cell leukemia translocation-altered YfdX PF10938.8 NODE_57219_length_296_cov_2.398467_g49280_i0reverse_frame_1 - 0.052 13.5 0.1 0.073 13.0 0.1 1.5 1 1 0 1 1 1 0 YfdX protein Orbi_VP7 PF00897.17 NODE_57219_length_296_cov_2.398467_g49280_i0reverse_frame_1 - 0.13 11.3 0.0 0.15 11.1 0.0 1.1 1 0 0 1 1 1 0 Orbivirus inner capsid protein VP7 TetR_N PF00440.23 NODE_57215_length_296_cov_2.521073_g49276_i0reverse_frame_1 - 3.2e-16 58.9 0.2 4.2e-16 58.5 0.2 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 NODE_57215_length_296_cov_2.521073_g49276_i0reverse_frame_1 - 0.042 14.0 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase PT PF04886.12 NODE_57214_length_296_cov_2.528736_g49275_i0forward_frame_1 - 0.02 14.4 0.3 0.034 13.7 0.3 1.3 1 0 0 1 1 1 0 PT repeat INSC_LBD PF16748.5 NODE_57211_length_296_cov_2.662835_g49272_i0reverse_frame_1 - 0.25 10.8 0.0 0.25 10.8 0.0 2.5 4 0 0 4 4 4 0 Inscuteable LGN-binding domain DNA_pol_B_2 PF03175.13 NODE_57207_length_296_cov_2.724138_g49268_i0forward_frame_1 - 1e-06 27.9 0.0 1.2e-06 27.7 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral Mer2 PF09074.10 NODE_57205_length_296_cov_2.785441_g49266_i0reverse_frame_1 - 0.015 15.1 0.3 0.017 14.9 0.3 1.0 1 0 0 1 1 1 0 Mer2 TSC22 PF01166.18 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_1 - 0.063 13.6 0.4 0.11 12.9 0.4 1.3 1 0 0 1 1 1 0 TSC-22/dip/bun family DUF4210 PF13915.6 NODE_57192_length_296_cov_3.892720_g49253_i0forward_frame_1 - 0.057 14.0 0.0 0.085 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) Tna_leader PF08053.11 NODE_57186_length_296_cov_6.482759_g49247_i0reverse_frame_1 - 0.036 14.0 0.5 0.13 12.3 0.0 2.1 2 0 0 2 2 2 0 Tryptophanase operon leader peptide GPR_Gpa2_C PF11970.8 NODE_57175_length_296_cov_51.647510_g49236_i0forward_frame_1 - 0.84 9.8 5.1 0.25 11.5 1.7 1.8 2 0 0 2 2 2 0 G protein-coupled glucose receptor regulating Gpa2 C-term Etmic-2 PF06670.11 NODE_57170_length_296_cov_57.532567_g49231_i0forward_frame_1 - 0.12 11.3 1.8 0.13 11.2 1.8 1.0 1 0 0 1 1 1 0 Microneme protein Etmic-2 Glyco_hydro_80 PF13647.6 NODE_57167_length_296_cov_60.984674_g49228_i0forward_frame_1 - 0.12 11.9 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A Lar_restr_allev PF14354.6 NODE_57167_length_296_cov_60.984674_g49228_i0forward_frame_1 - 0.38 11.1 4.8 0.66 10.4 4.8 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_6 PF14599.6 NODE_57167_length_296_cov_60.984674_g49228_i0forward_frame_1 - 0.66 10.0 6.0 0.24 11.4 1.7 2.1 1 1 1 2 2 2 0 Zinc-ribbon DUF5465 PF17553.2 NODE_57163_length_296_cov_68.118774_g49224_i0reverse_frame_1 - 0.28 11.8 2.5 0.68 10.6 2.5 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5465) TMEM100 PF16311.5 NODE_57155_length_296_cov_74.283525_g49216_i0forward_frame_1 - 0.43 10.2 2.3 0.81 9.3 2.1 1.6 1 1 0 1 1 1 0 Transmembrane protein 100 SBF_like PF13593.6 NODE_57149_length_296_cov_86.827586_g49210_i0reverse_frame_1 - 1.4e-15 57.5 0.5 1.4e-15 57.4 0.5 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) Sp38 PF07354.12 NODE_57142_length_296_cov_163.122605_g49204_i0forward_frame_1 - 1.6 8.1 9.6 1.7 8.1 4.7 2.0 1 1 1 2 2 2 0 Zona-pellucida-binding protein (Sp38) DUF2633 PF11119.8 NODE_57139_length_296_cov_212.325670_g49201_i0reverse_frame_1 - 0.046 13.6 1.5 0.084 12.8 1.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) MGS PF02142.22 NODE_57124_length_296_cov_1089.183908_g49186_i0reverse_frame_1 - 0.025 14.8 0.0 0.025 14.8 0.0 1.1 1 0 0 1 1 1 0 MGS-like domain ODC_AZ PF02100.17 NODE_57124_length_296_cov_1089.183908_g49186_i0forward_frame_1 - 0.0073 16.3 0.0 0.011 15.7 0.0 1.5 1 1 0 1 1 1 1 Ornithine decarboxylase antizyme UL97 PF06734.12 NODE_57122_length_296_cov_2576.773946_g49184_i0forward_frame_1 - 0.062 13.2 0.1 0.07 13.0 0.1 1.1 1 0 0 1 1 1 0 UL97 NYAP_C PF15452.6 NODE_57121_length_296_cov_12029.252874_g49183_i0reverse_frame_1 - 0.058 13.2 0.2 0.08 12.8 0.2 1.2 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter DUF4059 PF13268.6 NODE_57115_length_297_cov_1.068702_g49177_i0reverse_frame_1 - 0.016 15.6 0.6 0.025 15.0 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4059) E1-E2_ATPase PF00122.20 NODE_57100_length_297_cov_1.515267_g49162_i0reverse_frame_1 - 3.9e-12 46.1 0.4 3.9e-12 46.1 0.4 1.5 2 0 0 2 2 2 1 E1-E2 ATPase IL6 PF00489.17 NODE_57100_length_297_cov_1.515267_g49162_i0reverse_frame_1 - 0.089 12.4 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 Interleukin-6/G-CSF/MGF family DUF1140 PF06600.11 NODE_57095_length_297_cov_1.656489_g49157_i0reverse_frame_1 - 0.042 14.3 0.2 0.052 14.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1140) Lamprin PF06403.11 NODE_57093_length_297_cov_1.687023_g49155_i0forward_frame_1 - 0.0087 16.0 2.2 0.016 15.2 0.2 1.9 2 0 0 2 2 2 1 Lamprin DUF2315 PF10231.9 NODE_57091_length_297_cov_1.725191_g49153_i0forward_frame_1 - 0.065 13.3 0.2 0.089 12.9 0.2 1.2 1 1 0 1 1 1 0 Apoptogenic protein 1 HNHc_6 PF16784.5 NODE_57090_length_297_cov_1.736641_g49152_i0reverse_frame_1 - 0.0037 16.8 0.1 0.0041 16.7 0.1 1.1 1 0 0 1 1 1 1 Putative HNHc nuclease V_ATPase_I PF01496.19 NODE_57085_length_297_cov_1.843511_g49147_i0forward_frame_1 - 3.6e-25 88.1 1.0 3.9e-25 87.9 1.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family PKcGMP_CC PF16808.5 NODE_57081_length_297_cov_1.904580_g49143_i0reverse_frame_1 - 0.025 14.4 0.2 0.051 13.4 0.2 1.6 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Fumerase PF05681.14 NODE_57081_length_297_cov_1.904580_g49143_i0reverse_frame_1 - 0.1 12.0 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Fumarate hydratase (Fumerase) Class_IIIsignal PF04021.12 NODE_57066_length_297_cov_2.133588_g49128_i0forward_frame_1 - 3.7 7.7 5.6 5.3 7.2 5.6 1.2 1 0 0 1 1 1 0 Class III signal peptide BBP1_C PF15272.6 NODE_57063_length_297_cov_2.213740_g49125_i0reverse_frame_1 - 0.026 14.4 3.0 0.03 14.1 3.0 1.1 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal N6-adenineMlase PF10237.9 NODE_57061_length_297_cov_2.232824_g49123_i0forward_frame_1 - 0.072 12.9 0.0 0.082 12.7 0.0 1.1 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase DUF4834 PF16118.5 NODE_57053_length_297_cov_2.603053_g49115_i0reverse_frame_1 - 0.019 15.9 0.9 0.027 15.5 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) CRA PF06589.11 NODE_57053_length_297_cov_2.603053_g49115_i0reverse_frame_1 - 0.068 13.3 7.0 0.076 13.1 7.0 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) Zip PF02535.22 NODE_57053_length_297_cov_2.603053_g49115_i0reverse_frame_1 - 0.093 11.9 3.8 0.1 11.8 3.8 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter CLN3 PF02487.17 NODE_57053_length_297_cov_2.603053_g49115_i0reverse_frame_1 - 0.27 10.3 0.6 0.3 10.1 0.6 1.0 1 0 0 1 1 1 0 CLN3 protein Presenilin PF01080.17 NODE_57053_length_297_cov_2.603053_g49115_i0reverse_frame_1 - 2.8 6.6 3.5 2.9 6.5 3.5 1.1 1 0 0 1 1 1 0 Presenilin TraS PF10624.9 NODE_57047_length_297_cov_2.877863_g49109_i0forward_frame_1 - 0.0022 17.9 0.1 0.0026 17.7 0.1 1.1 1 0 0 1 1 1 1 Plasmid conjugative transfer entry exclusion protein TraS TIG_2 PF18020.1 NODE_57045_length_297_cov_2.912214_g49107_i0reverse_frame_1 - 0.023 15.3 0.1 0.029 15.0 0.1 1.2 1 0 0 1 1 1 0 TIG domain found in plexin Flavi_capsid PF01003.19 NODE_57043_length_297_cov_3.003817_g49105_i0reverse_frame_1 - 0.2 11.4 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Flavivirus capsid protein C DUF188 PF02639.14 NODE_57043_length_297_cov_3.003817_g49105_i0forward_frame_1 - 4.5e-19 68.4 0.0 5.6e-19 68.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized BCR, YaiI/YqxD family COG1671 Hydrolase_6 PF13344.6 NODE_57043_length_297_cov_3.003817_g49105_i0forward_frame_1 - 0.056 13.6 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF4510 PF14971.6 NODE_57041_length_297_cov_3.049618_g49103_i0reverse_frame_1 - 0.082 13.3 9.4 0.087 13.2 9.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4510) Lamprin PF06403.11 NODE_57039_length_297_cov_3.286260_g49101_i0forward_frame_1 - 0.0078 16.2 10.5 0.02 14.9 7.1 2.1 1 1 1 2 2 2 2 Lamprin RrnaAD PF00398.20 NODE_57032_length_297_cov_4.335878_g49094_i0forward_frame_1 - 0.051 12.6 0.0 0.061 12.4 0.0 1.0 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Molybdopterin_N PF18364.1 NODE_57031_length_297_cov_4.339695_g49093_i0reverse_frame_1 - 0.11 12.5 1.5 5.6 7.1 0.0 2.3 2 0 0 2 2 2 0 Molybdopterin oxidoreductase N-terminal domain Alpha-amylase_C PF02806.18 NODE_57029_length_297_cov_4.522901_g49091_i0forward_frame_1 - 1.4e-08 35.1 0.0 2.1e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Malt_amylase_C PF16657.5 NODE_57029_length_297_cov_4.522901_g49091_i0forward_frame_1 - 0.0033 17.5 0.1 0.012 15.7 0.1 1.8 1 1 1 2 2 2 1 Maltogenic Amylase, C-terminal domain STIL_N PF15253.6 NODE_57029_length_297_cov_4.522901_g49091_i0forward_frame_1 - 0.071 12.1 0.0 0.081 11.9 0.0 1.0 1 0 0 1 1 1 0 SCL-interrupting locus protein N-terminus Methyltransf_32 PF13679.6 NODE_57028_length_297_cov_5.790076_g49090_i0reverse_frame_1 - 0.13 12.3 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Methyltransferase domain Arteri_Gl PF00951.18 NODE_57026_length_297_cov_16.740458_g49088_i0forward_frame_1 - 1.3 8.8 6.2 1.4 8.7 6.2 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein zf-C2HC_2 PF13913.6 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_1 - 0.015 15.2 0.5 0.041 13.8 0.5 1.8 1 0 0 1 1 1 0 zinc-finger of a C2HC-type CLIP1_ZNF PF16641.5 NODE_56994_length_297_cov_129.591603_g49056_i0forward_frame_1 - 0.16 11.9 0.1 0.27 11.2 0.1 1.3 1 0 0 1 1 1 0 CLIP1 zinc knuckle Hormone_3 PF00159.18 NODE_56989_length_297_cov_186.343511_g49051_i0reverse_frame_1 - 0.11 12.5 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Pancreatic hormone peptide DUF2833 PF11090.8 NODE_56981_length_297_cov_1218.603053_g49043_i0forward_frame_1 - 0.0056 17.0 0.3 0.008 16.5 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2833) BBIP10 PF14777.6 NODE_56980_length_297_cov_1381.553435_g49042_i0reverse_frame_1 - 7.4e-19 67.1 6.0 7.7e-19 67.0 5.1 1.4 1 1 0 1 1 1 1 Cilia BBSome complex subunit 10 HMG_box PF00505.19 NODE_56979_length_297_cov_1837.362595_g49041_i0forward_frame_1 - 6.6e-14 52.1 3.0 1.9e-07 31.4 0.0 2.4 3 0 0 3 3 3 2 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_56979_length_297_cov_1837.362595_g49041_i0forward_frame_1 - 6.1e-08 33.1 2.5 0.00015 22.3 0.1 2.7 2 1 1 3 3 3 2 HMG-box domain YitT_membrane PF02588.15 NODE_56974_length_297_cov_73402.167939_g49036_i0forward_frame_1 - 0.049 13.0 0.1 0.063 12.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DUF4489 PF14879.6 NODE_56972_length_298_cov_0.870722_g49034_i0forward_frame_2 - 0.02 15.0 0.4 0.021 14.9 0.4 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4489) DUF3146 PF11344.8 NODE_56964_length_298_cov_1.444867_g49026_i0forward_frame_3 - 0.065 12.9 0.1 0.094 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3146) ASFV_p27 PF06556.11 NODE_56961_length_298_cov_1.471483_g49023_i0reverse_frame_2 - 0.015 15.4 0.3 0.02 15.0 0.3 1.3 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus Mannosyl_trans PF05007.13 NODE_56961_length_298_cov_1.471483_g49023_i0forward_frame_2 - 8.3e-13 48.8 5.0 9.9e-13 48.5 5.0 1.1 1 0 0 1 1 1 1 Mannosyltransferase (PIG-M) GCFC PF07842.12 NODE_56960_length_298_cov_1.479087_g49022_i0reverse_frame_3 - 0.069 12.7 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 GC-rich sequence DNA-binding factor-like protein PI31_Prot_N PF11566.8 NODE_56958_length_298_cov_1.562738_g49020_i0reverse_frame_2 - 0.086 12.6 0.2 0.099 12.4 0.2 1.2 1 1 0 1 1 1 0 PI31 proteasome regulator N-terminal DUF5554 PF17709.1 NODE_56955_length_298_cov_1.596958_g49017_i0forward_frame_3 - 0.014 15.4 0.1 0.024 14.8 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5554) Peptidase_S26 PF10502.9 NODE_56949_length_298_cov_1.730038_g49011_i0forward_frame_2 - 0.12 12.2 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Signal peptidase, peptidase S26 IFT57 PF10498.9 NODE_56944_length_298_cov_1.847909_g49006_i0forward_frame_3 - 0.013 14.5 3.2 0.014 14.4 3.2 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 DUF4354 PF14263.6 NODE_56941_length_298_cov_1.927757_g49003_i0forward_frame_2 - 0.14 12.0 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) TauE PF01925.19 NODE_56940_length_298_cov_1.939163_g49002_i0reverse_frame_3 - 3e-12 46.7 13.5 3.5e-12 46.5 13.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Nop25 PF09805.9 NODE_56939_length_298_cov_1.946768_g49001_i0forward_frame_2 - 0.91 10.0 6.3 1.1 9.7 6.3 1.1 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) Pox_Ag35 PF03286.14 NODE_56939_length_298_cov_1.946768_g49001_i0forward_frame_2 - 1.5 8.6 7.7 1.5 8.6 7.7 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein SDA1 PF05285.12 NODE_56939_length_298_cov_1.946768_g49001_i0forward_frame_2 - 1.5 8.2 13.1 1.9 7.9 13.1 1.1 1 0 0 1 1 1 0 SDA1 PB1 PF00564.24 NODE_56939_length_298_cov_1.946768_g49001_i0forward_frame_2 - 1.7 8.6 5.3 3.1 7.8 5.3 1.5 1 0 0 1 1 1 0 PB1 domain RTT107_BRCT_5 PF16770.5 NODE_56936_length_298_cov_2.076046_g48998_i0reverse_frame_3 - 0.032 14.1 0.3 0.041 13.8 0.3 1.3 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain DUF1700 PF08006.11 NODE_56936_length_298_cov_2.076046_g48998_i0reverse_frame_3 - 0.28 10.7 3.6 0.34 10.4 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF3854 PF12965.7 NODE_56934_length_298_cov_2.110266_g48996_i0forward_frame_2 - 0.065 13.2 0.3 0.082 12.9 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) Big_9 PF17963.1 NODE_56933_length_298_cov_2.114068_g48995_i0forward_frame_3 - 0.00022 21.9 15.9 0.0012 19.6 7.1 2.1 1 1 1 2 2 2 2 Bacterial Ig domain p12I PF12233.8 NODE_56928_length_298_cov_2.250951_g48990_i0reverse_frame_3 - 0.034 14.6 0.0 0.04 14.4 0.0 1.1 1 0 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein cEGF PF12662.7 NODE_56927_length_298_cov_2.254753_g48989_i0forward_frame_3 - 0.12 12.4 0.7 0.24 11.4 0.7 1.5 1 0 0 1 1 1 0 Complement Clr-like EGF-like adh_short PF00106.25 NODE_56924_length_298_cov_2.353612_g48986_i0reverse_frame_3 - 0.00015 21.3 0.1 0.00018 21.0 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Phage_holin_2_3 PF16080.5 NODE_56924_length_298_cov_2.353612_g48986_i0forward_frame_3 - 0.23 11.2 1.1 0.39 10.5 0.1 1.9 2 0 0 2 2 2 0 Bacteriophage holin family HP1 DUF3720 PF12517.8 NODE_56923_length_298_cov_2.361217_g48985_i0reverse_frame_3 - 0.15 13.0 0.0 0.2 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3720) Oxidored_molyb PF00174.19 NODE_56922_length_298_cov_2.361217_g48984_i0reverse_frame_2 - 1.5e-12 47.5 0.0 1.6e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Fimbrial PF00419.20 NODE_56913_length_298_cov_2.931559_g48975_i0forward_frame_3 - 8.3e-08 32.6 1.1 9.2e-08 32.5 1.1 1.0 1 0 0 1 1 1 1 Fimbrial protein CBP_BcsF PF11120.8 NODE_56912_length_298_cov_2.946768_g48974_i0reverse_frame_3 - 0.13 12.4 0.8 0.39 10.9 0.2 1.9 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsF TTL PF03133.15 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_2 - 2.9e-18 66.0 0.1 3.1e-18 65.9 0.1 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Dala_Dala_lig_C PF07478.13 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_2 - 0.0023 17.5 0.0 0.0024 17.4 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_YheCD PF14398.6 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_2 - 0.0038 16.5 0.0 0.0038 16.5 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_2 - 0.012 14.9 0.0 0.016 14.5 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Metallophos PF00149.28 NODE_56909_length_298_cov_3.817490_g48971_i0reverse_frame_2 - 0.00042 20.9 0.0 0.00043 20.9 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 NODE_56909_length_298_cov_3.817490_g48971_i0reverse_frame_2 - 0.058 13.6 0.0 0.098 12.9 0.0 1.5 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Peptidase_C53 PF05550.11 NODE_56908_length_298_cov_4.391635_g48970_i0reverse_frame_2 - 0.082 12.6 0.0 0.11 12.2 0.0 1.3 1 1 0 1 1 1 0 Pestivirus Npro endopeptidase C53 DUF2650 PF10853.8 NODE_56908_length_298_cov_4.391635_g48970_i0forward_frame_2 - 4.3 7.1 11.8 5.2 6.9 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2650) TraI_2_C PF07515.11 NODE_56901_length_298_cov_30.231939_g48963_i0reverse_frame_2 - 0.034 14.1 4.6 0.042 13.8 4.6 1.3 1 0 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term Torus PF16131.5 NODE_56901_length_298_cov_30.231939_g48963_i0reverse_frame_2 - 0.57 10.9 6.7 0.38 11.5 5.3 1.5 1 1 0 1 1 1 0 Torus domain DUF4083 PF13314.6 NODE_56900_length_298_cov_38.471483_g48962_i0reverse_frame_2 - 0.12 12.3 1.1 0.25 11.3 0.8 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4083) APC_u15 PF16636.5 NODE_56894_length_298_cov_54.745247_g48956_i0reverse_frame_3 - 0.49 10.9 4.0 0.2 12.1 1.8 1.5 2 0 0 2 2 2 0 Unstructured region on APC between APC_crr regions 5 and 6 Ank_5 PF13857.6 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 1e-11 44.8 2.0 2.2e-07 31.0 0.3 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 1.4e-11 44.6 0.2 2.6e-08 34.2 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 1.8e-09 38.0 0.0 2.3e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 5.1e-07 29.8 0.2 0.0003 21.1 0.1 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 4.9e-06 26.5 0.0 0.0013 19.1 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat BacA PF02673.18 NODE_56892_length_298_cov_62.855513_g48954_i0forward_frame_2 - 0.072 12.8 0.3 0.07 12.8 0.3 1.1 1 0 0 1 1 1 0 Bacitracin resistance protein BacA FPN1 PF06963.12 NODE_56891_length_298_cov_63.034221_g48953_i0forward_frame_3 - 0.0098 14.5 0.4 0.0098 14.5 0.4 1.1 1 0 0 1 1 1 1 Ferroportin1 (FPN1) DUF1572 PF07609.11 NODE_56883_length_298_cov_71.631179_g48945_i0forward_frame_3 - 0.14 11.9 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) Dimer_Tnp_hAT PF05699.14 NODE_56880_length_298_cov_71.790875_g48942_i0reverse_frame_3 - 0.1 12.4 0.2 0.15 11.9 0.2 1.3 1 1 0 1 1 1 0 hAT family C-terminal dimerisation region HCR PF07111.12 NODE_56878_length_298_cov_75.144487_g48940_i0reverse_frame_3 - 0.022 12.9 6.5 0.024 12.7 6.5 1.0 1 0 0 1 1 1 0 Alpha helical coiled-coil rod protein (HCR) DUF4050 PF13259.6 NODE_56878_length_298_cov_75.144487_g48940_i0reverse_frame_3 - 0.25 11.6 5.6 0.29 11.4 5.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) DUF3523 PF12037.8 NODE_56878_length_298_cov_75.144487_g48940_i0reverse_frame_2 - 0.11 11.8 10.8 0.13 11.7 10.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) MAP17 PF15807.5 NODE_56877_length_298_cov_75.311787_g48939_i0reverse_frame_3 - 0.15 12.3 0.1 0.18 12.1 0.1 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 EVC2_like PF12297.8 NODE_56877_length_298_cov_75.311787_g48939_i0reverse_frame_3 - 0.18 10.5 1.8 0.2 10.3 1.8 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Exc PF07825.11 NODE_56874_length_298_cov_84.623574_g48936_i0reverse_frame_2 - 0.082 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Excisionase-like protein DGC PF08859.11 NODE_56874_length_298_cov_84.623574_g48936_i0forward_frame_3 - 0.13 12.4 0.2 0.15 12.1 0.2 1.1 1 0 0 1 1 1 0 DGC domain GTP_EFTU PF00009.27 NODE_56872_length_298_cov_85.798479_g48934_i0forward_frame_3 - 0.00055 19.5 1.0 0.00079 19.0 1.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Tmemb_185A PF10269.9 NODE_56871_length_298_cov_87.437262_g48933_i0forward_frame_2 - 0.06 13.0 3.4 0.064 12.9 3.4 1.0 1 0 0 1 1 1 0 Transmembrane Fragile-X-F protein EF-hand_1 PF00036.32 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_3 - 7.2e-06 25.2 0.3 0.057 13.0 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_3 - 7.4e-05 23.1 0.1 0.00011 22.5 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_3 - 0.0016 18.2 0.2 0.45 10.6 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_3 - 0.15 12.0 0.7 0.35 10.8 0.7 1.5 1 1 0 1 1 1 0 EF-hand domain pair OstA_2 PF13100.6 NODE_56868_length_298_cov_100.319392_g48930_i0reverse_frame_2 - 0.047 13.3 0.0 0.061 12.9 0.0 1.1 1 0 0 1 1 1 0 OstA-like protein zf-BED PF02892.15 NODE_56868_length_298_cov_100.319392_g48930_i0forward_frame_3 - 0.2 11.7 2.8 46 4.2 0.1 3.1 3 0 0 3 3 3 0 BED zinc finger FAR1 PF03101.15 NODE_56866_length_298_cov_103.148289_g48928_i0reverse_frame_3 - 0.061 14.0 1.0 0.12 13.1 1.0 1.5 1 1 0 1 1 1 0 FAR1 DNA-binding domain RHS PF03527.14 NODE_56866_length_298_cov_103.148289_g48928_i0reverse_frame_3 - 0.11 12.3 0.7 0.63 9.8 0.1 2.3 2 1 0 2 2 2 0 RHS protein Flp_C PF05202.12 NODE_56861_length_298_cov_128.927757_g48923_i0reverse_frame_2 - 0.0058 16.2 1.3 0.0061 16.1 1.3 1.1 1 0 0 1 1 1 1 Recombinase Flp protein Dpy-30 PF05186.13 NODE_56860_length_298_cov_164.600760_g48922_i0reverse_frame_3 - 1.5e-17 62.9 0.0 2.6e-17 62.2 0.0 1.4 1 0 0 1 1 1 1 Dpy-30 motif RIIa PF02197.17 NODE_56860_length_298_cov_164.600760_g48922_i0reverse_frame_3 - 1.4e-05 24.7 0.5 2.5e-05 23.9 0.1 1.6 2 0 0 2 2 2 1 Regulatory subunit of type II PKA R-subunit LacY_symp PF01306.19 NODE_56860_length_298_cov_164.600760_g48922_i0forward_frame_3 - 1.4 7.6 12.7 1.7 7.4 12.7 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter PSRT PF07636.11 NODE_56859_length_298_cov_168.228137_g48921_i0forward_frame_3 - 0.0004 20.0 3.8 0.0004 20.0 3.8 2.2 2 0 0 2 2 2 1 PSRT SufE PF02657.15 NODE_56855_length_298_cov_208.266160_g48917_i0reverse_frame_2 - 0.075 12.9 0.1 0.1 12.4 0.1 1.2 1 0 0 1 1 1 0 Fe-S metabolism associated domain MerR PF00376.23 NODE_56855_length_298_cov_208.266160_g48917_i0forward_frame_2 - 0.18 11.6 0.0 0.32 10.8 0.0 1.3 1 0 0 1 1 1 0 MerR family regulatory protein DUF2156 PF09924.9 NODE_56853_length_298_cov_284.429658_g48915_i0reverse_frame_3 - 0.13 11.2 0.0 0.17 10.9 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2156) Toxin_32 PF08120.11 NODE_56849_length_298_cov_11876.916350_g48911_i0reverse_frame_3 - 0.21 11.4 0.2 0.34 10.8 0.2 1.3 1 0 0 1 1 1 0 Tamulustoxin family NPBW PF15180.6 NODE_56849_length_298_cov_11876.916350_g48911_i0reverse_frame_3 - 0.38 10.6 2.6 2.5 8.0 1.0 2.0 1 1 1 2 2 2 0 Neuropeptides B and W TMEM251 PF15190.6 NODE_56842_length_299_cov_1.238636_g48904_i0forward_frame_2 - 0.22 11.5 1.4 0.26 11.2 1.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 251 zinc_ribbon_4 PF13717.6 NODE_56839_length_299_cov_1.359848_g48901_i0forward_frame_2 - 0.0054 16.6 6.9 5 7.1 0.2 3.7 3 1 0 3 3 3 3 zinc-ribbon domain cEGF PF12662.7 NODE_56839_length_299_cov_1.359848_g48901_i0forward_frame_2 - 0.007 16.3 22.9 0.44 10.5 1.9 3.7 3 0 0 3 3 3 3 Complement Clr-like EGF-like zf-RRPl_C4 PF17026.5 NODE_56839_length_299_cov_1.359848_g48901_i0forward_frame_2 - 0.037 14.1 8.7 0.052 13.7 8.1 1.6 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type FXa_inhibition PF14670.6 NODE_56839_length_299_cov_1.359848_g48901_i0forward_frame_2 - 0.073 13.4 27.7 1.3 9.4 5.1 3.3 2 1 1 3 3 3 0 Coagulation Factor Xa inhibitory site DUF4215 PF13948.6 NODE_56839_length_299_cov_1.359848_g48901_i0forward_frame_2 - 0.81 10.2 17.3 4.8 7.7 0.3 3.9 3 2 0 3 3 3 0 Domain of unknown function (DUF4215) JAMP PF05571.12 NODE_56839_length_299_cov_1.359848_g48901_i0forward_frame_2 - 1.9 8.1 18.9 1.7 8.2 3.0 2.9 1 1 2 3 3 3 0 JNK1/MAPK8-associated membrane protein zinc_ribbon_5 PF13719.6 NODE_56839_length_299_cov_1.359848_g48901_i0forward_frame_2 - 4.5 7.1 8.3 33 4.3 0.6 3.2 3 0 0 3 3 3 0 zinc-ribbon domain MASE4 PF17158.4 NODE_56837_length_299_cov_1.363636_g48899_i0forward_frame_2 - 8.5e-10 38.3 9.8 8.5e-10 38.3 9.8 1.7 1 1 1 2 2 2 1 Membrane-associated sensor, integral membrane domain SID-1_RNA_chan PF13965.6 NODE_56837_length_299_cov_1.363636_g48899_i0forward_frame_2 - 0.018 13.5 3.2 0.017 13.5 3.2 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF1129 PF06570.11 NODE_56837_length_299_cov_1.363636_g48899_i0forward_frame_2 - 0.028 13.9 0.8 0.031 13.8 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3687 PF12459.8 NODE_56837_length_299_cov_1.363636_g48899_i0forward_frame_2 - 1.2 8.7 7.5 5.4 6.6 0.0 2.9 4 0 0 4 4 4 0 D-Ala-teichoic acid biosynthesis protein DUF5482 PF17579.2 NODE_56834_length_299_cov_1.473485_g48896_i0reverse_frame_2 - 0.13 12.1 0.0 0.2 11.5 0.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5482) MDMPI_C PF07398.11 NODE_56831_length_299_cov_1.659091_g48893_i0forward_frame_3 - 0.043 14.7 0.6 0.043 14.7 0.6 1.5 2 0 0 2 2 2 0 MDMPI C-terminal domain SipA_VBS PF17985.1 NODE_56827_length_299_cov_1.768939_g48889_i0forward_frame_2 - 0.0016 18.2 0.3 2.5 8.2 0.0 2.5 2 0 0 2 2 2 2 SipA vinculin binding site UCH PF00443.29 NODE_56826_length_299_cov_1.795455_g48888_i0reverse_frame_2 - 0.0046 16.5 0.0 0.0056 16.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Toxin-JAB1 PF15659.6 NODE_56824_length_299_cov_1.848485_g48886_i0reverse_frame_3 - 0.012 15.9 0.4 0.017 15.4 0.4 1.2 1 0 0 1 1 1 0 JAB-like toxin 1 DUF384 PF04064.13 NODE_56817_length_299_cov_2.034091_g48879_i0reverse_frame_3 - 0.14 12.0 0.1 0.19 11.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF384) rve_3 PF13683.6 NODE_56817_length_299_cov_2.034091_g48879_i0forward_frame_3 - 0.087 12.6 1.0 0.13 12.1 0.2 1.7 2 0 0 2 2 2 0 Integrase core domain TcdA_TcdB_pore PF12920.7 NODE_56817_length_299_cov_2.034091_g48879_i0forward_frame_3 - 0.38 8.9 4.0 0.48 8.6 4.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain PAPS_reduct PF01507.19 NODE_56817_length_299_cov_2.034091_g48879_i0forward_frame_3 - 0.48 10.5 4.3 0.75 9.8 3.9 1.6 1 1 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family DUF4145 PF13643.6 NODE_56817_length_299_cov_2.034091_g48879_i0forward_frame_3 - 1.1 9.4 4.4 0.84 9.8 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4145) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks239.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks239.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks239.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks239.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:57:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Endomucin PF07010.12 ORF48766 - 1.5 8.7 43.5 2.2 8.2 43.5 1.2 1 0 0 1 1 1 0 Endomucin Utp14 PF04615.13 ORF48766 - 6.3 5.2 9.3 8.1 4.9 9.3 1.0 1 0 0 1 1 1 0 Utp14 protein PAN_1 PF00024.26 ORF46650 - 0.00015 21.6 16.9 0.024 14.6 6.2 2.4 2 0 0 2 2 2 2 PAN domain Ubiquitin_4 PF18036.1 ORF46650 - 0.0098 15.9 0.0 0.024 14.7 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin-like domain PAN_4 PF14295.6 ORF46650 - 0.016 15.1 6.6 0.016 15.1 6.6 2.9 2 0 0 2 2 2 0 PAN domain DUF2207 PF09972.9 ORF46650 - 0.036 12.8 0.0 0.05 12.4 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4381 PF14316.6 ORF46650 - 0.07 13.4 1.0 0.12 12.6 1.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) ABC_tran PF00005.27 ORF45422 - 3.7e-14 53.4 0.0 1.8e-13 51.2 0.0 2.1 3 0 0 3 3 3 1 ABC transporter AAA_21 PF13304.6 ORF45422 - 2.6e-10 40.6 0.0 1e-09 38.7 0.0 1.9 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF45422 - 0.00028 20.4 0.2 0.00091 18.7 0.0 1.8 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain FERM_C PF09380.10 ORF45422 - 0.064 13.7 0.1 0.61 10.5 0.0 2.3 2 0 0 2 2 2 0 FERM C-terminal PH-like domain SbcCD_C PF13558.6 ORF45422 - 0.12 12.6 0.0 1.9 8.8 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit OmpH PF03938.14 ORF41076 - 0.037 14.4 2.4 0.073 13.4 2.4 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) SMAP PF15477.6 ORF41076 - 0.29 12.1 1.8 0.43 11.5 0.0 2.0 2 0 0 2 2 2 0 Small acidic protein family SlyX PF04102.12 ORF39469 - 0.6 10.8 4.3 0.64 10.7 0.5 2.6 2 0 0 2 2 2 0 SlyX DUF5071 PF16804.5 ORF24540 - 1.4 9.2 4.8 5.5 7.3 0.1 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF5071) DUF3958 PF13125.6 ORF24485 - 0.62 10.3 4.7 12 6.1 0.7 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3958) FAM76 PF16046.5 ORF24485 - 2.5 7.4 4.5 0.69 9.2 1.0 1.7 1 1 0 2 2 2 0 FAM76 protein TPH PF13868.6 ORF109331 - 0.0021 16.6 94.8 0.0034 15.9 94.8 1.3 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain Adenylsucc_synt PF00709.21 ORF104946 - 1.2e-178 594.4 0.0 1.4e-178 594.2 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Acyl_transf_3 PF01757.22 ORF99684 - 9.5e-16 57.8 15.7 1.4e-15 57.2 15.7 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF2162 PF09930.9 ORF99684 - 0.047 13.1 0.7 0.11 11.9 0.7 1.6 1 0 0 1 1 1 0 Predicted transporter (DUF2162) PUB PF09409.10 ORF99442 - 4.9e-17 61.6 0.0 9.3e-17 60.7 0.0 1.4 1 0 0 1 1 1 1 PUB domain DNA_ligase_A_M PF01068.21 ORF99442 - 0.013 15.2 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 ATP dependent DNA ligase domain Apolipoprotein PF01442.18 ORF96129 - 0.0097 15.8 15.8 0.052 13.4 15.8 2.1 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain HSP70 PF00012.20 ORF96129 - 0.23 9.6 15.7 0.32 9.1 15.7 1.1 1 0 0 1 1 1 0 Hsp70 protein Baculo_PEP_C PF04513.12 ORF96129 - 0.4 10.7 8.8 3.3 7.7 2.4 2.8 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1512 PF07431.12 ORF96129 - 0.64 9.0 5.2 1.3 7.9 5.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1512) KfrA_N PF11740.8 ORF96129 - 1.7 9.4 6.3 3.7 8.2 6.3 1.6 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term Mitofilin PF09731.9 ORF96129 - 2.3 6.9 28.3 0.42 9.4 22.6 1.9 2 0 0 2 2 2 0 Mitochondrial inner membrane protein YlqD PF11068.8 ORF96129 - 9.8 6.6 25.5 2 8.8 12.1 3.2 1 1 1 2 2 2 0 YlqD protein Hydant_A_N PF05378.13 ORF96127 - 1.3 8.7 5.8 0.2 11.3 1.3 1.9 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase N-terminal region Acyl_transf_3 PF01757.22 ORF89690 - 9.5e-16 57.8 15.7 1.4e-15 57.2 15.7 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF2162 PF09930.9 ORF89690 - 0.047 13.1 0.7 0.11 11.9 0.7 1.6 1 0 0 1 1 1 0 Predicted transporter (DUF2162) Mid2 PF04478.12 ORF8556 - 0.18 11.7 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor Abhydro_lipase PF04083.16 ORF75817 - 6.2e-20 70.5 0.0 1.3e-19 69.5 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF75817 - 7.4e-18 65.1 0.6 4.4e-17 62.6 0.6 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold FSH1 PF03959.13 ORF75817 - 0.003 17.2 0.1 0.12 12.0 0.0 2.2 2 0 0 2 2 2 1 Serine hydrolase (FSH1) Hydrolase_4 PF12146.8 ORF75817 - 0.0064 15.8 0.0 0.074 12.3 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 DUF900 PF05990.12 ORF75817 - 0.024 14.1 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) NOP5NT PF08156.13 ORF75817 - 0.054 13.9 0.1 0.17 12.3 0.1 1.8 1 0 0 1 1 1 0 NOP5NT (NUC127) domain TusA PF01206.17 ORF75817 - 0.058 13.2 0.0 6.3 6.7 0.0 2.7 3 0 0 3 3 3 0 Sulfurtransferase TusA Sacchrp_dh_NADP PF03435.18 ORF74672 - 5.4e-12 46.1 1.1 1.1e-11 45.1 0.1 1.9 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Abhydro_lipase PF04083.16 ORF74545 - 6.2e-20 70.5 0.0 1.3e-19 69.5 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF74545 - 7.4e-18 65.1 0.6 4.4e-17 62.6 0.6 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold FSH1 PF03959.13 ORF74545 - 0.003 17.2 0.1 0.12 12.0 0.0 2.2 2 0 0 2 2 2 1 Serine hydrolase (FSH1) Hydrolase_4 PF12146.8 ORF74545 - 0.0064 15.8 0.0 0.074 12.3 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 DUF900 PF05990.12 ORF74545 - 0.024 14.1 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) NOP5NT PF08156.13 ORF74545 - 0.054 13.9 0.1 0.17 12.3 0.1 1.8 1 0 0 1 1 1 0 NOP5NT (NUC127) domain TusA PF01206.17 ORF74545 - 0.058 13.2 0.0 6.3 6.7 0.0 2.7 3 0 0 3 3 3 0 Sulfurtransferase TusA Prok-TraM PF09228.10 ORF6932 - 0.13 12.7 0.1 0.28 11.6 0.1 1.5 1 0 0 1 1 1 0 Prokaryotic Transcriptional repressor TraM LAGLIDADG_3 PF14528.6 ORF57554 - 1.6e-08 34.7 0.1 0.0068 16.7 0.0 2.9 2 0 0 2 2 2 2 LAGLIDADG-like domain LAGLIDADG_1 PF00961.19 ORF57554 - 1.6e-05 25.8 0.1 0.3 12.1 0.1 2.7 2 0 0 2 2 2 2 LAGLIDADG endonuclease Hom_end PF05204.14 ORF57554 - 0.027 14.6 0.0 0.58 10.3 0.0 2.4 2 0 0 2 2 2 0 Homing endonuclease Acyl_transf_3 PF01757.22 ORF53942 - 9.5e-16 57.8 15.7 1.4e-15 57.2 15.7 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF2162 PF09930.9 ORF53942 - 0.047 13.1 0.7 0.11 11.9 0.7 1.6 1 0 0 1 1 1 0 Predicted transporter (DUF2162) 2OG-FeII_Oxy_2 PF13532.6 ORF51490 - 1.3e-16 61.4 0.0 3.3e-16 60.0 0.0 1.6 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily Glyco_transf_8 PF01501.20 ORF51490 - 1.7e-15 57.3 0.0 2.4e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 8 PhoLip_ATPase_C PF16212.5 ORF42241 - 2.5e-70 237.1 30.8 2.9e-70 236.9 30.8 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase_3 PF08282.12 ORF42241 - 0.015 15.1 0.1 0.015 15.1 0.1 2.3 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase DSPc PF00782.20 ORF42241 - 0.089 12.6 0.2 0.24 11.2 0.2 1.7 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain CDC45 PF02724.14 ORF42241 - 0.21 9.8 18.1 0.29 9.4 18.1 1.1 1 0 0 1 1 1 0 CDC45-like protein Hydrolase PF00702.26 ORF42241 - 3.1 8.0 4.8 0.59 10.4 0.1 2.1 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase Mid2 PF04478.12 ORF42080 - 0.18 11.7 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor Pyr_redox_2 PF07992.14 ORF36898 - 3.9e-58 197.0 0.2 4.5e-58 196.8 0.2 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF36898 - 3.5e-16 59.5 2.1 1.1e-13 51.6 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF36898 - 6.5e-13 48.6 4.8 3.6e-11 42.9 0.4 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF36898 - 1.8e-07 31.4 0.1 5.9e-07 29.7 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HI0933_like PF03486.14 ORF36898 - 0.00016 20.6 0.1 0.025 13.3 0.2 2.5 3 0 0 3 3 3 1 HI0933-like protein FAD_binding_2 PF00890.24 ORF36898 - 0.00017 20.8 2.3 0.0035 16.5 1.4 2.2 2 0 0 2 2 2 1 FAD binding domain NAD_binding_7 PF13241.6 ORF36898 - 0.00088 19.7 0.0 0.053 14.0 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 ORF36898 - 0.0044 16.4 0.0 0.045 13.0 0.0 2.1 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 ORF36898 - 0.0086 15.7 0.3 0.11 12.1 0.1 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF36898 - 0.01 15.0 0.9 0.02 14.0 0.9 1.5 1 0 0 1 1 1 0 Glucose inhibited division protein A FAD_oxidored PF12831.7 ORF36898 - 0.021 14.2 0.0 0.033 13.5 0.0 1.5 1 0 0 1 1 1 0 FAD dependent oxidoreductase K_oxygenase PF13434.6 ORF36898 - 0.03 13.5 0.0 0.1 11.7 0.0 1.8 1 1 1 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Thi4 PF01946.17 ORF36898 - 0.1 11.9 0.1 0.23 10.7 0.1 1.5 1 0 0 1 1 1 0 Thi4 family Methyltransf_28 PF02636.17 ORF36898 - 0.14 11.7 0.0 0.47 10.0 0.0 1.8 2 0 0 2 2 2 0 Putative S-adenosyl-L-methionine-dependent methyltransferase NAD_binding_8 PF13450.6 ORF36898 - 0.32 11.3 3.3 0.41 10.9 0.5 2.3 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Ammonium_transp PF00909.21 ORF28286 - 1.1e-44 152.7 8.7 6.5e-42 143.6 6.8 2.2 2 0 0 2 2 2 2 Ammonium Transporter Family PD40 PF07676.12 ORF27018 - 3.8e-37 125.5 3.2 4.8e-10 39.1 0.1 6.1 6 0 0 6 6 6 4 WD40-like Beta Propeller Repeat TolB_N PF04052.13 ORF27018 - 4.3e-31 107.2 0.0 1.1e-30 105.9 0.0 1.7 1 0 0 1 1 1 1 TolB amino-terminal domain DPPIV_N PF00930.21 ORF27018 - 4.2e-12 45.5 0.0 1.5e-08 33.8 0.0 2.8 1 1 2 3 3 3 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region Pectate_lyase22 PF14583.6 ORF27018 - 8.9e-10 37.8 0.2 0.00027 19.7 0.0 4.2 3 1 2 5 5 5 3 Oligogalacturonate lyase Gmad1 PF10647.9 ORF27018 - 7e-08 32.5 1.6 0.00081 19.2 0.1 3.6 2 1 1 3 3 3 2 Lipoprotein LpqB beta-propeller domain Peptidase_S9_N PF02897.15 ORF27018 - 0.00034 19.5 0.0 0.0024 16.7 0.0 2.0 2 0 0 2 2 2 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Lactonase PF10282.9 ORF27018 - 0.068 12.4 0.1 3.8 6.7 0.0 2.3 1 1 1 2 2 2 0 Lactonase, 7-bladed beta-propeller TcfC PF16967.5 ORF27018 - 0.17 11.4 0.3 4.7 6.8 0.0 2.9 3 0 0 3 3 3 0 E-set like domain Mid2 PF04478.12 ORF26728 - 0.18 11.7 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor Acyl_transf_3 PF01757.22 ORF25736 - 9.5e-16 57.8 15.7 1.4e-15 57.2 15.7 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF2162 PF09930.9 ORF25736 - 0.047 13.1 0.7 0.11 11.9 0.7 1.6 1 0 0 1 1 1 0 Predicted transporter (DUF2162) PhoLip_ATPase_C PF16212.5 ORF22768 - 2.5e-70 237.1 30.8 2.9e-70 236.9 30.8 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase_3 PF08282.12 ORF22768 - 0.015 15.1 0.1 0.015 15.1 0.1 2.3 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase DSPc PF00782.20 ORF22768 - 0.089 12.6 0.2 0.24 11.2 0.2 1.7 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain CDC45 PF02724.14 ORF22768 - 1.4 7.1 21.0 1.8 6.7 21.0 1.1 1 0 0 1 1 1 0 CDC45-like protein Hydrolase PF00702.26 ORF22768 - 3.1 8.0 4.8 0.59 10.4 0.1 2.1 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase LRR_6 PF13516.6 ORF12694 - 7.3e-08 31.9 4.4 0.028 14.4 0.1 4.5 4 0 0 4 4 4 3 Leucine Rich repeat LRR_4 PF12799.7 ORF12694 - 0.0021 18.4 0.0 12 6.5 0.0 3.6 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF12694 - 0.0037 17.0 1.2 1.9 8.3 0.1 3.5 3 1 0 3 3 3 2 Leucine rich repeat Hydant_A_N PF05378.13 ORF107874 - 1.3 8.7 5.8 0.2 11.3 1.3 1.9 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase N-terminal region XhlA PF10779.9 ORF106261 - 0.25 11.5 2.4 23 5.3 0.0 3.4 3 0 0 3 3 3 0 Haemolysin XhlA TF_AP-2 PF03299.14 ORF106261 - 2.3 8.2 10.3 0.051 13.5 1.2 2.2 2 1 0 2 2 2 0 Transcription factor AP-2 SQS_PSY PF00494.19 ORF105906 - 0.0031 17.0 0.5 0.0072 15.9 0.2 1.7 2 0 0 2 2 2 1 Squalene/phytoene synthase XhlA PF10779.9 ORF105906 - 0.26 11.5 2.4 23 5.3 0.0 3.4 3 0 0 3 3 3 0 Haemolysin XhlA TF_AP-2 PF03299.14 ORF105906 - 2.3 8.1 10.3 0.051 13.5 1.2 2.2 2 1 0 2 2 2 0 Transcription factor AP-2 Ank_5 PF13857.6 ORF105657 - 4e-05 23.8 0.0 0.00011 22.5 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF105657 - 0.0017 18.7 0.0 0.0096 16.3 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF105657 - 0.0044 17.6 0.0 0.021 15.4 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF105657 - 0.037 14.6 0.0 0.11 13.2 0.0 1.8 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF105657 - 0.041 14.4 0.0 0.12 13.0 0.0 1.8 1 0 0 1 1 1 0 Ankyrin repeat Borrelia_P83 PF05262.11 ORF105657 - 0.37 9.2 19.1 0.45 9.0 19.1 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein HECT PF00632.25 ORF101875 - 1.9e-40 139.3 0.0 2.3e-40 139.0 0.0 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) DUF4471 PF14740.6 NODE_11695_length_1288_cov_82.948923_g8699_i0reverse_frame_1 - 2e-59 201.4 10.3 2.9e-59 200.8 10.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4471) DUF4470 PF14737.6 NODE_11695_length_1288_cov_82.948923_g8699_i0reverse_frame_1 - 2.3e-17 63.0 0.1 4.2e-17 62.1 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4470) Ion_trans PF00520.31 ORF91478 - 6e-15 55.1 9.9 1e-14 54.4 9.9 1.3 1 0 0 1 1 1 1 Ion transport protein DUF3143 PF11341.8 ORF91478 - 0.089 13.2 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3143) LBP_BPI_CETP_C PF02886.17 ORF77359 - 1e-05 25.2 0.0 1.9e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 LBP / BPI / CETP family, C-terminal domain T2SSE PF00437.20 ORF76047 - 0.00018 20.7 0.2 0.0009 18.4 0.2 1.8 1 1 1 2 2 2 1 Type II/IV secretion system protein AAA_23 PF13476.6 ORF76047 - 0.0083 16.6 0.0 0.012 16.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF76047 - 0.0091 16.4 0.1 0.022 15.1 0.1 1.7 1 0 0 1 1 1 1 AAA ATPase domain DUF927 PF06048.11 ORF76047 - 0.015 14.8 0.6 0.029 13.9 0.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF927) AAA_29 PF13555.6 ORF76047 - 0.029 14.1 0.1 0.054 13.3 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain B12-binding PF02310.19 ORF76047 - 0.045 13.8 0.0 1.8 8.6 0.0 2.3 2 0 0 2 2 2 0 B12 binding domain AAA_30 PF13604.6 ORF76047 - 0.088 12.5 0.2 0.29 10.8 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA_21 PF13304.6 ORF76047 - 0.14 11.9 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system DUF229 PF02995.17 ORF72867 - 1.4e-26 93.2 8.2 7.9e-17 61.0 0.2 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF72867 - 3.5e-07 29.9 3.9 1.6e-06 27.7 3.3 2.2 1 1 0 1 1 1 1 Sulfatase tRNA-synt_2d PF01409.20 ORF61820 - 4.7e-83 278.4 0.0 6.3e-83 278.0 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) PheRS_DBD3 PF18553.1 ORF61820 - 1.8e-15 56.9 0.3 1.4e-14 54.1 0.0 2.5 2 0 0 2 2 2 1 PheRS DNA binding domain 3 tRNA_synthFbeta PF17759.1 ORF61820 - 3.9e-06 26.4 0.0 0.039 13.4 0.0 2.2 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 ORF61820 - 7.1e-06 25.3 0.6 0.00095 18.3 0.1 2.7 3 0 0 3 3 3 2 tRNA synthetases class II (D, K and N) DUF3474 PF11960.8 ORF57131 - 1.5 9.0 5.1 2.7 8.2 0.5 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3474) PMC2NT PF08066.12 ORF57131 - 3.7 8.3 7.9 0.33 11.7 1.0 2.8 3 0 0 3 3 3 0 PMC2NT (NUC016) domain TPR_1 PF00515.28 ORF57032 - 1.7e-06 27.6 5.2 0.047 13.5 0.6 5.3 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF57032 - 1.4e-05 24.9 5.6 0.39 11.0 0.3 5.1 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF57032 - 4.5e-05 23.3 3.6 3.9 7.9 0.1 4.7 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF57032 - 0.00027 21.1 0.5 0.083 13.2 0.0 3.5 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF57032 - 0.00029 21.3 0.5 0.19 12.3 0.3 3.3 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF57032 - 0.00031 20.4 0.5 0.015 14.9 0.0 2.9 3 0 0 3 3 3 1 TPR repeat TPR_16 PF13432.6 ORF57032 - 0.067 13.8 0.1 6.7 7.4 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF57032 - 0.16 11.9 0.1 68 3.5 0.0 3.8 4 1 0 4 4 4 0 Tetratricopeptide repeat Sel1 PF08238.12 ORF57032 - 0.16 12.7 0.3 19 6.1 0.0 2.8 2 0 0 2 2 2 0 Sel1 repeat TPR_7 PF13176.6 ORF57032 - 0.31 11.2 1.4 18 5.7 0.1 4.1 4 1 0 4 4 4 0 Tetratricopeptide repeat DUF3474 PF11960.8 ORF54873 - 1.4 9.1 5.1 2.7 8.2 0.5 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3474) PMC2NT PF08066.12 ORF54873 - 4.9 7.9 8.3 0.33 11.7 1.0 2.8 3 0 0 3 3 3 0 PMC2NT (NUC016) domain Pyr_redox_2 PF07992.14 ORF5181 - 2.9e-05 23.4 0.0 0.00053 19.3 0.0 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF5181 - 0.008 16.7 0.2 0.12 12.9 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DUF647 PF04884.14 ORF5181 - 0.22 11.1 0.0 0.33 10.5 0.0 1.2 1 0 0 1 1 1 0 Vitamin B6 photo-protection and homoeostasis VWA_3 PF13768.6 ORF50 - 1.4e-26 93.3 0.0 1.9e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF50 - 4.1e-20 72.8 0.7 8.4e-20 71.7 0.2 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF50 - 3.6e-14 53.3 0.0 1.5e-13 51.3 0.0 2.1 2 1 0 2 2 2 1 von Willebrand factor type A domain DUF3474 PF11960.8 ORF44016 - 2.9 8.1 4.8 2.7 8.2 0.5 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3474) PMC2NT PF08066.12 ORF44016 - 7.8 7.3 9.1 0.33 11.7 1.0 2.8 3 0 0 3 3 3 0 PMC2NT (NUC016) domain VWA_3 PF13768.6 ORF42873 - 1.4e-26 93.3 0.0 1.9e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF42873 - 4.1e-20 72.8 0.7 8.4e-20 71.7 0.2 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF42873 - 3.6e-14 53.3 0.0 1.5e-13 51.3 0.0 2.1 2 1 0 2 2 2 1 von Willebrand factor type A domain DUF4381 PF14316.6 ORF39916 - 1.8 8.8 5.9 27 5.0 5.5 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4381) tRNA-synt_2b PF00587.25 ORF38386 - 6.6e-36 124.0 0.0 9.6e-36 123.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 ORF38386 - 2e-34 118.0 3.5 3.3e-34 117.4 3.5 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Filament PF00038.21 ORF38386 - 0.0036 16.9 0.6 0.0061 16.2 0.6 1.3 1 0 0 1 1 1 1 Intermediate filament protein CENP-F_leu_zip PF10473.9 ORF38386 - 0.034 14.2 1.0 0.42 10.6 0.7 2.4 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.11 ORF38386 - 0.092 11.6 2.0 0.14 11.0 2.0 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Cep57_CLD_2 PF14197.6 ORF38386 - 0.17 12.0 5.4 0.61 10.2 5.4 1.9 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 APG6_N PF17675.1 ORF38386 - 0.3 11.6 3.6 0.75 10.3 3.6 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF4164 PF13747.6 ORF38386 - 0.37 11.1 4.4 0.89 9.9 4.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Adap_comp_sub PF00928.21 ORF3402 - 3.1e-87 292.3 0.6 3.9e-87 292.0 0.6 1.1 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 ORF3402 - 0.00052 20.0 1.1 0.0011 18.9 1.1 1.6 1 0 0 1 1 1 1 Clathrin adaptor complex small chain muHD PF10291.9 ORF3402 - 0.023 14.2 0.0 0.044 13.2 0.0 1.4 1 0 0 1 1 1 0 Muniscin C-terminal mu homology domain CH PF00307.31 ORF30384 - 3.9e-40 136.4 1.5 9.5e-18 64.4 0.0 3.4 3 0 0 3 3 3 3 Calponin homology (CH) domain EF-hand_7 PF13499.6 ORF30384 - 9.4e-11 42.0 3.2 1.3e-10 41.5 1.2 2.4 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF30384 - 2e-08 33.5 1.0 3.8e-05 23.3 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF30384 - 4.1e-07 29.1 0.7 0.0049 16.3 0.0 2.9 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF30384 - 1.3e-06 28.1 0.6 5.6e-06 26.1 0.4 2.2 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_9 PF14658.6 ORF30384 - 3.8e-05 23.9 0.1 9.7e-05 22.6 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF30384 - 0.00013 21.3 0.4 0.0068 15.9 0.0 2.9 2 0 0 2 2 2 1 EF hand CAMSAP_CH PF11971.8 ORF30384 - 0.00015 21.5 0.3 0.024 14.5 0.0 3.5 4 0 0 4 4 4 1 CAMSAP CH domain SPARC_Ca_bdg PF10591.9 ORF30384 - 0.0034 17.7 0.1 0.0088 16.4 0.1 1.7 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region DUF5011 PF16403.5 ORF30384 - 0.047 13.8 1.0 0.44 10.7 0.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5011) CBAH PF02275.18 ORF30384 - 0.093 12.4 0.5 0.14 11.8 0.5 1.2 1 0 0 1 1 1 0 Linear amide C-N hydrolases, choloylglycine hydrolase family FYVE PF01363.21 ORF27488 - 1.6e-07 31.3 7.6 3e-07 30.5 7.6 1.5 1 0 0 1 1 1 1 FYVE zinc finger Ribosomal_S24e PF01282.19 ORF27488 - 0.42 10.6 2.5 0.66 10.0 0.1 2.6 3 0 0 3 3 3 0 Ribosomal protein S24e DUF1664 PF07889.12 ORF27488 - 4.7 7.3 9.4 2.1 8.4 1.6 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) EF-hand_1 PF00036.32 ORF18138 - 0.00074 18.9 0.1 0.0084 15.6 0.0 2.7 2 1 1 3 3 3 1 EF hand EF-hand_7 PF13499.6 ORF18138 - 0.00077 19.9 0.0 0.0082 16.6 0.0 2.5 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF18138 - 0.0087 15.9 0.1 0.4 10.7 0.0 3.0 2 1 1 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF18138 - 0.011 15.6 0.0 0.036 13.9 0.0 1.9 2 0 0 2 2 2 0 EF-hand domain pair HisKA_2 PF07568.12 ORF18138 - 0.016 15.3 0.1 0.029 14.4 0.1 1.4 1 0 0 1 1 1 0 Histidine kinase EF-hand_5 PF13202.6 ORF18138 - 0.045 13.3 0.3 0.46 10.1 0.0 2.7 3 0 0 3 3 3 0 EF hand EF-hand_4 PF12763.7 ORF18138 - 0.046 13.7 0.2 0.53 10.3 0.1 2.2 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Peptidase_S10 PF00450.22 ORF16288 - 2.3e-105 353.4 3.6 2.7e-105 353.2 3.6 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase DUF229 PF02995.17 ORF15831 - 1.4e-26 93.2 8.2 7.9e-17 61.0 0.2 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF15831 - 3.5e-07 29.9 3.9 1.6e-06 27.7 3.3 2.2 1 1 0 1 1 1 1 Sulfatase Rab3-GTPase_cat PF13890.6 ORF106131 - 5.7e-15 55.3 1.1 2.4e-08 33.8 0.0 2.3 1 1 1 2 2 2 2 Rab3 GTPase-activating protein catalytic subunit Anoctamin PF04547.12 ORF98368 - 1.7e-36 126.0 3.1 2.1e-36 125.7 3.1 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel PhoR PF11808.8 ORF98368 - 0.12 12.8 0.1 0.12 12.8 0.1 2.6 3 0 0 3 3 3 0 Phosphate regulon sensor protein PhoR EDR1 PF14381.6 ORF97139 - 0.046 13.4 0.9 0.099 12.3 0.9 1.6 1 0 0 1 1 1 0 Ethylene-responsive protein kinase Le-CTR1 Exonuc_VII_L PF02601.15 ORF97139 - 6 6.3 11.8 29 4.1 11.8 1.8 1 1 0 1 1 1 0 Exonuclease VII, large subunit Rcd1 PF04078.13 ORF83514 - 9.1e-102 339.8 7.5 1.2e-101 339.4 7.5 1.1 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like IL7 PF01415.16 ORF83514 - 0.022 14.8 1.2 0.063 13.3 1.2 1.8 1 0 0 1 1 1 0 Interleukin 7/9 family RESP18 PF14948.6 ORF83514 - 0.094 13.0 1.1 0.25 11.7 1.1 1.7 1 0 0 1 1 1 0 RESP18 domain PPL4 PF18188.1 ORF83514 - 0.1 12.6 0.1 0.24 11.3 0.1 1.6 1 0 0 1 1 1 0 Prim-pol 4 Peptidase_S10 PF00450.22 ORF76533 - 1.6e-117 393.5 0.3 2.1e-117 393.1 0.3 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase Aldedh PF00171.22 ORF70983 - 1.2e-69 235.1 0.0 1.6e-69 234.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Ion_trans PF00520.31 ORF67233 - 7e-09 35.3 3.5 1.1e-08 34.7 3.5 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF67233 - 0.0025 17.2 0.0 2.6 7.8 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF67233 - 0.012 15.5 0.0 5.1 7.3 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain Phage_holin_2_4 PF16082.5 ORF67233 - 0.028 14.1 0.0 0.066 12.9 0.0 1.7 1 0 0 1 1 1 0 Bacteriophage holin family, superfamily II-like DUF4349 PF14257.6 ORF67233 - 0.034 13.6 0.1 0.076 12.5 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) EF-hand_7 PF13499.6 ORF67233 - 0.057 13.9 0.0 0.4 11.2 0.0 2.2 1 1 2 3 3 3 0 EF-hand domain pair DUF641 PF04859.12 ORF67233 - 0.068 13.5 0.2 0.15 12.4 0.2 1.6 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Baculo_PEP_C PF04513.12 ORF67233 - 0.094 12.8 1.0 0.17 11.9 1.0 1.4 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus EF-hand_8 PF13833.6 ORF67233 - 0.099 12.5 0.0 22 5.0 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF67233 - 0.11 12.1 0.0 2.1 8.0 0.0 2.4 2 0 0 2 2 2 0 EF hand SelA PF03841.13 ORF66312 - 1.1 8.1 5.0 0.91 8.4 2.8 1.8 2 1 1 3 3 3 0 L-seryl-tRNA selenium transferase AKAP7_NLS PF10469.9 ORF66312 - 1.9 8.3 7.6 4.3 7.2 7.6 1.6 1 1 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain DUF1631 PF07793.11 ORF62666 - 0.014 13.9 0.7 0.31 9.4 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1631) MgtE_N PF03448.17 ORF62666 - 0.066 13.8 1.7 31 5.2 0.1 3.3 3 0 0 3 3 3 0 MgtE intracellular N domain Bombinin PF05298.11 ORF62666 - 0.11 12.2 0.0 5.9 6.6 0.0 2.3 2 0 0 2 2 2 0 Bombinin FAD_binding_3 PF01494.19 ORF59634 - 5.8e-13 48.8 0.0 3.6e-12 46.2 0.0 1.9 1 1 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF59634 - 0.16 11.0 0.0 0.35 9.9 0.0 1.5 2 0 0 2 2 2 0 Squalene epoxidase Peptidase_S10 PF00450.22 ORF44007 - 1.6e-117 393.5 0.3 2.1e-117 393.1 0.3 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase Pertactin PF03212.14 ORF41443 - 4.7e-45 152.4 4.8 4.9e-45 152.4 3.0 2.0 2 0 0 2 2 2 1 Pertactin Autotransporter PF03797.19 ORF41443 - 1e-42 146.5 22.3 1e-42 146.5 22.3 1.9 2 0 0 2 2 2 1 Autotransporter beta-domain Acyl-CoA_dh_1 PF00441.24 ORF26799 - 8.9e-34 116.9 1.5 1.4e-33 116.2 1.5 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF26799 - 1.9e-18 66.5 0.3 3.6e-18 65.5 0.3 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF26799 - 2.1e-10 41.2 1.0 1.3e-09 38.7 0.0 2.8 3 1 0 3 3 3 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF26799 - 6e-05 23.3 0.1 0.0001 22.6 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain FATC PF02260.20 ORF26799 - 0.15 11.9 0.0 0.41 10.5 0.0 1.7 2 0 0 2 2 2 0 FATC domain TSP_1 PF00090.19 ORF24622 - 0.0019 18.4 21.2 0.0061 16.8 7.8 3.6 3 0 0 3 3 3 2 Thrombospondin type 1 domain LamB PF02264.15 ORF23633 - 1e-84 285.7 20.7 1.1e-84 285.5 20.7 1.0 1 0 0 1 1 1 1 LamB porin Pinin_SDK_memA PF04696.13 ORF21292 - 0.008 16.2 0.4 0.008 16.2 0.4 2.4 2 0 0 2 2 2 1 pinin/SDK/memA/ protein conserved region CS PF04969.16 ORF21292 - 0.028 15.4 0.0 0.059 14.4 0.0 1.6 1 0 0 1 1 1 0 CS domain Rb_C PF08934.10 ORF21292 - 0.12 12.2 0.0 0.3 10.9 0.0 1.6 1 0 0 1 1 1 0 Rb C-terminal domain K_oxygenase PF13434.6 ORF20118 - 1.1e-12 47.8 0.0 3.3e-09 36.3 0.0 2.1 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) FMO-like PF00743.19 ORF20118 - 4.2e-09 35.4 0.0 6.7e-09 34.7 0.0 1.3 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_2 PF07992.14 ORF20118 - 1.1e-05 24.9 0.2 0.028 13.7 0.0 2.6 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF20118 - 0.00022 20.6 0.0 0.0078 15.5 0.0 2.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF20118 - 0.0006 20.3 0.0 0.027 15.0 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DUF3961 PF13106.6 ORF18118 - 0.065 12.9 0.1 0.065 12.9 0.1 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3961) ELK PF03789.13 ORF18118 - 0.081 13.0 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 ELK domain Comm PF15957.5 ORF18118 - 5.6 7.4 5.1 4.9 7.5 0.7 2.6 2 0 0 2 2 2 0 Commissureless Peptidase_M48_N PF16491.5 ORF16079 - 5.1e-51 173.1 11.5 5.1e-51 173.1 11.5 2.3 2 0 0 2 2 2 1 CAAX prenyl protease N-terminal, five membrane helices Peptidase_M48 PF01435.18 ORF16079 - 8.5e-42 143.2 0.0 1.2e-41 142.7 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 ORF16079 - 2.3e-06 27.1 0.5 2.3e-06 27.1 0.5 1.7 2 0 0 2 2 2 1 BlaR1 peptidase M56 Csm1_B PF18211.1 ORF16079 - 0.044 13.6 0.1 0.11 12.4 0.1 1.6 1 0 0 1 1 1 0 Csm1 subunit domain B 2-oxoacid_dh PF00198.23 ORF11092 - 2.7e-81 272.5 0.3 3.3e-81 272.1 0.3 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 ORF11092 - 1.7e-17 63.0 0.6 4.2e-17 61.8 0.6 1.7 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 ORF11092 - 9e-12 45.1 0.2 4.1e-11 43.0 0.1 2.2 2 0 0 2 2 2 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 ORF11092 - 0.0004 20.1 0.1 0.018 14.8 0.0 2.5 1 1 1 2 2 2 1 Biotin-lipoyl like DEC-1_N PF04625.13 ORF11092 - 0.04 12.9 12.6 0.057 12.4 12.6 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region CDPS PF16715.5 ORF110289 - 0.13 11.9 1.7 0.3 10.7 1.7 1.6 1 0 0 1 1 1 0 Cyclodipeptide synthase DUF3435 PF11917.8 ORF110289 - 0.14 11.1 10.7 0.24 10.3 10.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) BSP_II PF05432.11 ORF110289 - 0.23 11.1 9.4 0.38 10.4 9.4 1.3 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) FUSC PF04632.12 ORF110289 - 1.6 7.2 6.1 2.4 6.6 6.1 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF2968 PF11180.8 ORF110289 - 6.7 6.3 12.4 15 5.2 12.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) LamB PF02264.15 ORF103198 - 3.7e-83 280.5 19.7 4.2e-83 280.3 19.7 1.0 1 0 0 1 1 1 1 LamB porin TSP_1 PF00090.19 ORF102601 - 0.0019 18.4 21.2 0.0061 16.8 7.8 3.6 3 0 0 3 3 3 2 Thrombospondin type 1 domain TSP_1 PF00090.19 ORF100333 - 0.0019 18.4 21.2 0.0061 16.8 7.8 3.6 3 0 0 3 3 3 2 Thrombospondin type 1 domain DUF1500 PF07389.12 NODE_11791_length_1283_cov_79.742788_g8772_i0forward_frame_1 - 0.0091 16.1 0.3 0.0091 16.1 0.3 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1500) Methyltransf_24 PF13578.6 ORF99460 - 4.8e-07 30.8 0.0 9.7e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF99460 - 0.13 11.4 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase TryThrA_C PF12319.8 ORF9570 - 0.0055 16.2 3.9 0.013 15.0 3.9 1.6 1 0 0 1 1 1 1 Tryptophan-Threonine-rich plasmodium antigen C terminal DUF1664 PF07889.12 ORF9570 - 0.019 15.0 2.6 0.019 15.0 2.6 4.3 2 2 3 5 5 5 0 Protein of unknown function (DUF1664) NPV_P10 PF05531.12 ORF9570 - 0.13 12.7 7.8 9.3 6.8 0.1 5.3 3 3 2 5 5 5 0 Nucleopolyhedrovirus P10 protein DUF3037 PF11236.8 ORF9570 - 0.14 12.6 0.3 0.14 12.6 0.3 3.5 1 1 3 4 4 4 0 Protein of unknown function (DUF3037) FlaC_arch PF05377.11 ORF9570 - 0.18 12.2 0.2 0.18 12.2 0.2 5.3 5 1 1 6 6 6 0 Flagella accessory protein C (FlaC) Bep_C_terminal PF17841.1 ORF9570 - 0.24 11.7 4.1 4.1 7.7 0.3 3.0 3 0 0 3 3 3 0 BID domain of Bartonella effector protein (Bep) JIP_LZII PF16471.5 ORF9570 - 0.25 11.6 0.1 0.25 11.6 0.1 5.0 4 2 2 6 6 6 0 JNK-interacting protein leucine zipper II DUF1699 PF08004.11 ORF9570 - 0.35 10.6 5.5 0.86 9.3 0.0 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF1699) DUF3287 PF11690.8 ORF9570 - 0.58 9.9 4.5 10 5.9 1.7 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3287) HlyD_2 PF12700.7 ORF9570 - 1.3 7.7 5.5 0.58 8.8 1.7 2.0 2 0 0 2 2 2 0 HlyD family secretion protein Sipho_Gp157 PF05565.11 ORF9570 - 1.8 8.6 13.5 0.4 10.7 1.4 3.4 3 1 1 4 4 4 0 Siphovirus Gp157 EzrA PF06160.12 ORF9570 - 2.1 6.4 16.1 0.018 13.3 5.2 2.4 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA Fib_alpha PF08702.10 ORF9570 - 2.5 8.3 27.6 2.2 8.5 2.3 4.3 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family FPP PF05911.11 ORF9570 - 6.3 4.9 37.4 0.064 11.5 14.0 2.2 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil MatP PF06303.12 ORF9570 - 7.2 7.2 8.5 0.53 10.9 1.2 2.9 2 1 1 3 3 3 0 MatP N-terminal domain Fzo_mitofusin PF04799.13 ORF9570 - 7.6 6.1 28.4 0.86 9.1 1.0 5.6 2 2 4 6 6 6 0 fzo-like conserved region ubiquitin PF00240.23 ORF85251 - 2.1e-11 43.4 0.7 5.2e-11 42.1 0.1 1.8 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF85251 - 4.1e-07 29.7 0.8 8.1e-07 28.8 0.1 1.8 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like GerD PF17898.1 ORF85251 - 0.021 14.8 9.2 0.046 13.7 8.8 1.8 1 1 0 1 1 1 0 Spore germination GerD central core domain PI3K_rbd PF00794.18 ORF85251 - 0.061 13.5 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain XPC-binding PF09280.11 ORF85251 - 0.068 12.9 11.0 0.17 11.6 9.4 2.6 2 1 0 2 2 2 0 XPC-binding domain DUF2407 PF10302.9 ORF85251 - 0.079 13.5 0.0 0.16 12.5 0.0 1.4 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain HMD PF03201.16 ORF85251 - 0.6 10.4 5.1 18 5.6 0.1 3.0 2 1 0 2 2 2 0 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase tRNA-synt_2 PF00152.20 ORF83953 - 1.6e-81 273.8 0.0 1.9e-81 273.6 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF83953 - 1.7e-07 31.0 0.0 0.00015 21.3 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) tRNA_anti-codon PF01336.25 ORF83953 - 0.00077 19.4 0.0 0.0016 18.4 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Mucin PF01456.17 ORF72841 - 1.3 9.0 24.2 0.16 11.9 14.7 2.3 2 0 0 2 2 2 0 Mucin-like glycoprotein DUF3439 PF11921.8 ORF72841 - 1.7 8.7 21.0 1.1 9.2 14.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) Tir_receptor_C PF07489.11 ORF72841 - 2.1 8.3 15.5 0.15 12.0 8.6 2.1 2 0 0 2 2 2 0 Translocated intimin receptor (Tir) C-terminus Metallophos PF00149.28 ORF72199 - 2e-26 93.8 0.3 4.4e-25 89.4 0.3 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Y_phosphatase2 PF03162.13 ORF72199 - 0.25 10.9 0.0 0.4 10.2 0.0 1.3 1 0 0 1 1 1 0 Tyrosine phosphatase family Pkinase PF00069.25 ORF69384 - 5.8e-20 71.8 0.0 1.4e-19 70.5 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF69384 - 2.3e-09 36.9 0.5 3.1e-07 29.9 0.2 2.9 2 1 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF69384 - 3.5e-06 27.1 0.7 8.3e-06 25.9 0.7 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF69384 - 0.00011 21.2 0.2 0.00019 20.5 0.2 1.3 1 0 0 1 1 1 1 Haspin like kinase domain EF-hand_7 PF13499.6 ORF69384 - 0.013 16.0 0.0 0.034 14.6 0.0 1.8 1 0 0 1 1 1 0 EF-hand domain pair RIO1 PF01163.22 ORF69384 - 0.047 13.3 0.1 0.11 12.0 0.0 1.7 2 0 0 2 2 2 0 RIO1 family Zeta_toxin PF06414.12 ORF62975 - 1.6e-18 66.7 0.0 2.4e-18 66.2 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 ORF62975 - 2.5e-05 24.5 0.0 4.4e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF62975 - 0.011 16.3 0.0 0.021 15.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain CN_hydrolase PF00795.22 ORF61594 - 7.9e-39 133.6 0.0 9.9e-39 133.2 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Vps55 PF04133.14 ORF61594 - 0.026 14.5 0.2 0.062 13.3 0.2 1.6 1 0 0 1 1 1 0 Vacuolar protein sorting 55 TIR_2 PF13676.6 ORF60445 - 0.0064 17.1 0.0 0.012 16.2 0.0 1.5 1 0 0 1 1 1 1 TIR domain zf-C3HC4_3 PF13920.6 ORF598 - 9.3e-09 35.0 3.6 3.2e-08 33.3 3.6 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF598 - 0.00057 19.7 4.3 0.00079 19.2 2.3 2.1 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF598 - 0.00068 19.9 2.4 0.0016 18.7 2.4 1.7 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF598 - 0.038 13.8 2.6 0.071 13.0 0.8 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF598 - 0.062 13.3 2.1 0.18 11.8 2.1 1.7 1 0 0 1 1 1 0 zinc-RING finger domain Pkinase PF00069.25 ORF57810 - 1.2e-58 198.5 1.1 1.7e-58 198.0 1.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57810 - 7.4e-27 94.3 0.4 1.4e-26 93.3 0.2 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF57810 - 6.3e-05 22.4 0.0 0.00062 19.2 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF57810 - 0.00096 18.0 0.0 0.011 14.6 0.0 2.2 1 1 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF57810 - 0.03 13.7 0.0 0.074 12.4 0.0 1.6 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF57810 - 0.2 11.5 0.0 0.32 10.9 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family PRMT5 PF05185.16 ORF53910 - 0.00015 21.7 0.0 0.00031 20.7 0.0 1.5 2 0 0 2 2 2 1 PRMT5 arginine-N-methyltransferase PrmA PF06325.13 ORF53910 - 0.00061 19.3 0.0 0.00096 18.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 ORF53910 - 0.0018 19.0 0.0 0.0035 18.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF53910 - 0.019 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 ORF53910 - 0.033 14.0 0.0 0.06 13.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain NNMT_PNMT_TEMT PF01234.17 ORF53910 - 0.044 13.0 0.0 0.075 12.2 0.0 1.3 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family Met_10 PF02475.16 ORF53910 - 0.057 13.2 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 Met-10+ like-protein PsbQ PF05757.11 ORF53910 - 0.2 11.4 2.5 0.25 11.0 0.1 2.4 4 0 0 4 4 4 0 Oxygen evolving enhancer protein 3 (PsbQ) RrnaAD PF00398.20 ORF53910 - 0.21 10.6 0.0 0.33 10.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Pyr_redox_2 PF07992.14 ORF49699 - 2.3e-57 194.5 0.4 2.9e-57 194.2 0.4 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF49699 - 2.4e-16 60.1 5.3 9.8e-14 51.7 0.6 3.1 3 1 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF49699 - 7.1e-16 58.3 0.3 4.2e-14 52.5 0.0 2.4 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 ORF49699 - 3.6e-08 33.9 0.0 1.7e-07 31.7 0.0 2.2 2 0 0 2 2 2 1 Reductase C-terminal NAD_binding_8 PF13450.6 ORF49699 - 1.9e-05 24.8 0.2 0.14 12.4 0.0 3.3 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 ORF49699 - 0.00016 20.5 2.8 1.5 7.5 0.0 4.2 4 1 1 5 5 5 1 HI0933-like protein NAD_binding_7 PF13241.6 ORF49699 - 0.00019 21.8 0.1 0.0055 17.1 0.0 3.0 2 2 0 2 2 2 1 Putative NAD(P)-binding NAD_binding_9 PF13454.6 ORF49699 - 0.00049 20.1 0.6 1.3 9.0 0.0 3.3 3 0 0 3 3 3 1 FAD-NAD(P)-binding DAO PF01266.24 ORF49699 - 0.002 17.8 6.0 0.38 10.3 0.2 3.5 3 1 1 4 4 4 2 FAD dependent oxidoreductase Amino_oxidase PF01593.24 ORF49699 - 0.0063 15.8 0.0 1 8.6 0.0 2.4 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 ORF49699 - 0.0068 15.5 0.6 0.64 9.0 0.0 2.9 2 1 1 3 3 3 1 Lycopene cyclase protein GIDA PF01134.22 ORF49699 - 0.0093 15.1 5.4 0.88 8.6 0.4 3.7 2 2 3 5 5 5 2 Glucose inhibited division protein A B12-binding PF02310.19 ORF49699 - 0.011 15.8 0.3 9.3 6.3 0.0 3.2 2 1 0 2 2 2 0 B12 binding domain TrkA_N PF02254.18 ORF49699 - 0.013 15.8 0.7 1.4 9.2 0.1 3.7 3 1 1 4 4 4 0 TrkA-N domain DUF1188 PF06690.11 ORF49699 - 0.035 13.6 0.0 0.054 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) adh_short PF00106.25 ORF49699 - 0.037 13.5 0.4 0.11 11.9 0.2 2.1 2 1 0 2 2 2 0 short chain dehydrogenase FAD_binding_3 PF01494.19 ORF49699 - 0.065 12.5 0.4 10 5.3 0.1 2.3 2 0 0 2 2 2 0 FAD binding domain Transketolase_C PF02780.20 ORF49699 - 0.13 12.2 0.1 7.2 6.5 0.1 3.1 2 1 0 2 2 2 0 Transketolase, C-terminal domain FAD_binding_2 PF00890.24 ORF49699 - 0.81 8.7 10.5 21 4.1 0.0 4.6 2 2 3 5 5 5 0 FAD binding domain cobW PF02492.19 ORF4960 - 6e-52 175.8 1.7 8e-52 175.4 1.7 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF4960 - 6.9e-12 45.1 0.0 1.4e-11 44.2 0.0 1.6 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 ORF4960 - 1.6e-05 24.8 0.2 0.076 12.9 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase ABC_tran PF00005.27 ORF4960 - 0.017 15.6 0.0 0.03 14.8 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 ORF4960 - 0.018 15.4 0.0 0.043 14.2 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 ORF4960 - 0.024 14.6 0.1 0.049 13.6 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_23 PF13476.6 ORF4960 - 0.041 14.4 0.1 0.12 12.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 ORF4960 - 0.074 12.1 0.2 0.16 11.0 0.1 1.5 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_30 PF13604.6 ORF4960 - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 ORF4960 - 0.11 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea MMR_HSR1 PF01926.23 ORF4960 - 0.13 12.3 0.2 0.41 10.8 0.2 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.6 ORF4960 - 0.14 12.7 0.0 0.46 11.0 0.0 1.8 1 0 0 1 1 1 0 AAA domain Arf PF00025.21 ORF4960 - 0.15 11.5 1.0 10 5.6 0.1 2.3 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_14 PF13173.6 ORF4960 - 0.16 12.0 0.0 0.35 10.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF4960 - 0.18 11.6 0.0 0.46 10.3 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain RPN6_N PF18055.1 ORF4792 - 2.9e-28 98.6 1.1 2.9e-28 98.6 1.1 2.6 2 0 0 2 2 2 1 26S proteasome regulatory subunit RPN6 N-terminal domain PCI PF01399.27 ORF4792 - 9e-16 58.3 0.3 9e-16 58.3 0.3 2.4 3 0 0 3 3 3 1 PCI domain RPN6_C_helix PF18503.1 ORF4792 - 1e-05 25.2 0.1 3.8e-05 23.3 0.0 2.1 2 0 0 2 2 2 1 26S proteasome subunit RPN6 C-terminal helix domain TPR_MalT PF17874.1 ORF4792 - 8.4e-05 22.1 0.1 0.0019 17.7 0.1 2.3 2 0 0 2 2 2 1 MalT-like TPR region TPR_12 PF13424.6 ORF4792 - 0.00011 22.5 0.2 0.016 15.5 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF4792 - 0.0013 19.2 0.0 1.6 9.3 0.0 3.1 4 0 0 4 4 4 2 Tetratricopeptide repeat SNAP PF14938.6 ORF4792 - 0.0013 18.2 0.1 0.02 14.3 0.0 2.6 2 2 0 2 2 2 1 Soluble NSF attachment protein, SNAP TPR_2 PF07719.17 ORF4792 - 0.25 11.5 1.3 4.6 7.6 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat RCC1_2 PF13540.6 ORF23947 - 3.3e-14 52.2 25.2 0.64 9.9 0.1 9.4 9 0 0 9 9 9 7 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 ORF23947 - 1.7e-06 28.5 0.8 29 5.2 0.0 7.3 8 1 1 9 9 9 0 Spectrin repeat Cas_GSU0053 PF09617.10 ORF23947 - 0.0079 16.2 0.3 22 5.0 0.0 3.6 2 2 2 4 4 4 0 CRISPR-associated protein GSU0053 (Cas_GSU0053) AFP_2 PF18815.1 ORF23947 - 0.036 14.3 14.1 36 4.7 0.0 7.7 4 2 4 8 8 8 0 Bacterial antifreeze protein repeat DUF5616 PF18481.1 ORF23947 - 0.14 12.5 0.0 30 4.9 0.0 3.9 4 1 0 4 4 4 0 Domain of unknown function (DUF5616) Capsule_synth PF05159.14 ORF23947 - 0.15 11.5 0.9 14 5.1 0.0 3.4 2 2 2 4 4 4 0 Capsule polysaccharide biosynthesis protein Methyltransf_29 PF03141.16 ORF23947 - 0.28 9.7 7.7 50 2.3 0.0 5.5 4 3 1 6 6 6 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Equine_IAV_S2 PF06502.11 ORF23947 - 0.41 10.8 0.1 0.41 10.8 0.1 5.3 7 0 0 7 7 7 0 Equine infectious anaemia virus S2 protein Phage_fiber_C PF06820.12 ORF23947 - 6.6 7.2 8.7 8.2 6.9 0.1 4.5 3 2 2 5 5 5 0 Putative prophage tail fibre C-terminus MTS PF05175.14 ORF15694 - 1.3e-05 24.8 0.1 2.2e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 ORF15694 - 1.3e-05 25.8 0.2 0.00014 22.5 0.1 2.5 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 ORF15694 - 0.00012 21.6 0.1 0.00019 21.0 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 ORF15694 - 0.00099 19.7 0.1 0.0033 18.0 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF15694 - 0.0013 18.6 0.0 0.0019 18.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF15694 - 0.0027 18.4 0.1 0.013 16.2 0.1 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF15694 - 0.081 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DUF2576 PF10845.8 ORF15694 - 0.13 11.9 0.0 0.37 10.4 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) Asp_protease_2 PF13650.6 ORF14304 - 0.032 14.9 0.0 2.4 8.8 0.0 2.6 2 0 0 2 2 2 0 Aspartyl protease Ammonium_transp PF00909.21 ORF108569 - 4e-131 437.4 40.5 4.5e-131 437.2 40.5 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Mucin PF01456.17 ORF10717 - 1.3 9.0 24.2 0.16 11.9 14.7 2.3 2 0 0 2 2 2 0 Mucin-like glycoprotein DUF3439 PF11921.8 ORF10717 - 1.7 8.7 21.0 1.1 9.2 14.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) Tir_receptor_C PF07489.11 ORF10717 - 2.1 8.3 15.5 0.15 12.0 8.6 2.1 2 0 0 2 2 2 0 Translocated intimin receptor (Tir) C-terminus CLPTM1 PF05602.12 ORF10118 - 5.2e-85 286.0 13.0 7.1e-85 285.6 13.0 1.2 1 0 0 1 1 1 1 Cleft lip and palate transmembrane protein 1 (CLPTM1) PQ-loop PF04193.14 ORF10118 - 0.00023 20.9 4.0 0.015 15.1 0.2 2.8 2 1 0 2 2 2 2 PQ loop repeat TMEM208_SND2 PF05620.11 ORF10118 - 1.6 8.5 5.8 13 5.6 0.4 3.2 3 0 0 3 3 3 0 SRP-independent targeting protein 2/TMEM208 CDC45 PF02724.14 ORF10118 - 2.8 6.1 11.0 4.4 5.5 11.0 1.3 1 0 0 1 1 1 0 CDC45-like protein DUF902 PF06001.13 NODE_11859_length_1279_cov_263.308682_g3440_i2forward_frame_1 - 0.11 13.0 4.8 12 6.5 0.5 3.5 2 1 0 2 2 2 0 Domain of Unknown Function (DUF902) zf-rbx1 PF12678.7 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 4e-05 23.8 0.3 0.00012 22.3 0.3 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 8.6e-05 22.5 0.1 0.00025 21.0 0.1 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_2 PF13639.6 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 9.2e-05 22.7 0.4 9.2e-05 22.7 0.4 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 0.0005 19.8 0.2 0.0016 18.2 0.2 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 0.00069 19.3 0.3 0.0019 17.9 0.3 1.7 1 0 0 1 1 1 1 RING-like zinc finger FANCL_C PF11793.8 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 0.0015 18.6 0.5 0.0046 17.1 0.1 2.0 2 0 0 2 2 2 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 0.0041 16.7 0.6 0.0041 16.7 0.6 2.1 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 0.0045 16.8 2.2 0.0047 16.8 0.1 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 0.0061 16.5 0.1 0.014 15.4 0.1 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 zf-ANAPC11 PF12861.7 NODE_11791_length_1283_cov_79.742788_g8772_i0reverse_frame_3 - 0.024 14.7 0.1 0.067 13.2 0.1 1.7 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger p450 PF00067.22 ORF949 - 3.8e-45 154.5 0.0 4.5e-45 154.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 TPR_6 PF13174.6 ORF85795 - 0.97 10.2 9.2 5.3 7.9 0.1 3.8 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF445 PF04286.12 ORF76395 - 1.2e-09 38.5 3.0 0.0046 16.8 0.0 3.7 2 2 2 4 4 4 3 Protein of unknown function (DUF445) UPF0139 PF03669.13 ORF76395 - 0.061 13.2 1.1 0.93 9.4 0.0 2.9 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0139) SpoVAB PF13782.6 ORF76395 - 0.2 12.0 2.8 4.1 7.8 1.4 2.6 2 0 0 2 2 2 0 Stage V sporulation protein AB DUF5406 PF17400.2 ORF69841 - 0.017 15.6 0.5 0.076 13.4 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5406) Aminotran_1_2 PF00155.21 ORF69139 - 1.7e-50 172.2 0.0 2e-50 172.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 ORF69139 - 2.3e-05 23.1 0.0 4.3e-05 22.2 0.0 1.4 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DUF2322 PF10084.9 ORF69139 - 0.17 11.9 0.8 0.72 9.9 0.0 2.4 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2322) DUF4157 PF13699.6 ORF65949 - 0.021 15.1 0.1 16 5.8 0.0 3.8 4 0 0 4 4 4 0 Domain of unknown function (DUF4157) PAN_4 PF14295.6 ORF65949 - 0.22 11.5 8.7 0.35 10.8 0.8 2.6 1 1 1 2 2 2 0 PAN domain DUF3439 PF11921.8 ORF65949 - 5.4 7.0 22.4 0.21 11.5 7.9 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF3439) ABC_tran_CTD PF16326.5 ORF65642 - 0.069 13.4 0.2 0.069 13.4 0.2 3.3 4 0 0 4 4 4 0 ABC transporter C-terminal domain DUF4279 PF14106.6 ORF65642 - 0.07 13.3 0.0 0.19 11.9 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4279) UDPGT PF00201.18 ORF54953 - 2.9e-14 52.8 0.0 1.6e-13 50.3 0.0 2.1 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF54953 - 0.0002 21.4 0.0 0.00035 20.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Aminotran_1_2 PF00155.21 ORF52292 - 2.8e-48 164.9 0.0 3.2e-48 164.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 ORF52292 - 2.3e-05 23.1 0.0 5.7e-05 21.8 0.0 1.5 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Asp_Arg_Hydrox PF05118.15 ORF35762 - 7.9e-47 159.0 0.1 1.2e-46 158.4 0.1 1.3 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase TPR_2 PF07719.17 ORF35762 - 0.00038 20.4 0.1 0.0018 18.3 0.1 2.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF35762 - 0.0022 17.7 0.1 0.0085 15.9 0.0 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF35762 - 0.032 15.0 3.4 0.044 14.6 0.3 2.8 2 1 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF35762 - 0.054 14.2 0.4 0.054 14.2 0.4 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF35762 - 0.11 12.6 1.1 0.35 11.1 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF35762 - 0.15 12.7 0.4 4.5 8.1 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat PH PF00169.29 ORF2583 - 0.0002 21.8 3.0 0.00024 21.6 0.3 2.5 2 0 0 2 2 2 1 PH domain PH_16 PF17838.1 ORF2583 - 0.03 14.2 0.2 0.03 14.2 0.2 2.7 3 0 0 3 3 3 0 PH domain bPH_1 PF08000.11 ORF13187 - 5e-06 26.6 3.8 2.1e-05 24.6 3.8 2.1 1 1 0 1 1 1 1 Bacterial PH domain DUF4094 PF13334.6 ORF13187 - 1.8 9.1 3.8 5.9 7.4 0.8 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) NMT PF01233.19 ORF111573 - 6.3e-73 243.9 0.3 2.8e-71 238.5 0.0 2.3 2 0 0 2 2 2 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain NMT_C PF02799.15 ORF111573 - 3.1e-66 222.9 4.8 3.1e-66 222.9 4.8 1.6 2 0 0 2 2 2 1 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain Acetyltransf_9 PF13527.7 ORF111573 - 2.1e-05 24.6 0.0 0.00028 21.0 0.0 2.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF111573 - 0.029 14.6 0.0 0.065 13.5 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family FOP_dimer PF09398.10 ORF111573 - 0.068 13.4 0.4 0.37 11.1 0.1 2.4 1 1 0 1 1 1 0 FOP N terminal dimerisation domain AAA_33 PF13671.6 ORF110966 - 1.5e-15 57.6 3.5 6.7e-08 32.8 0.1 2.9 2 1 1 3 3 3 2 AAA domain La PF05383.17 ORF110966 - 3.1e-15 56.0 0.0 7.3e-15 54.8 0.0 1.6 2 0 0 2 2 2 1 La domain KTI12 PF08433.10 ORF110966 - 0.00089 18.8 0.1 0.55 9.6 0.0 2.3 1 1 1 2 2 2 2 Chromatin associated protein KTI12 AAA_18 PF13238.6 ORF110966 - 0.0018 18.8 0.3 1.3 9.6 0.1 2.6 1 1 1 2 2 2 2 AAA domain AAA_22 PF13401.6 ORF110966 - 0.0043 17.3 0.0 0.056 13.7 0.0 2.5 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 ORF110966 - 0.028 14.8 0.1 6.7 7.1 0.0 2.6 1 1 1 2 2 2 0 AAA domain Ploopntkinase3 PF18751.1 ORF110966 - 0.038 13.9 0.0 0.077 12.9 0.0 1.5 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_28 PF13521.6 ORF110966 - 0.044 14.0 1.9 0.18 12.0 0.8 2.6 1 1 1 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF110966 - 0.13 12.3 0.4 0.4 10.7 0.1 2.0 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF110966 - 3.5 8.0 7.1 9.3 6.6 4.2 2.8 2 1 0 2 2 2 0 AAA ATPase domain DUF664 PF04978.12 ORF110966 - 6.6 7.1 10.1 0.97 9.8 1.7 3.0 3 1 1 4 4 4 0 Protein of unknown function (DUF664) MMS1_N PF10433.9 NODE_11914_length_1276_cov_6.709911_g8863_i0forward_frame_1 - 0.017 13.8 3.1 0.025 13.2 3.1 1.2 1 0 0 1 1 1 0 Mono-functional DNA-alkylating methyl methanesulfonate N-term Cornifin PF02389.15 NODE_11859_length_1279_cov_263.308682_g3440_i2reverse_frame_3 - 9.2e-07 29.1 10.9 0.001 19.3 1.4 2.2 1 1 1 2 2 2 2 Cornifin (SPRR) family Ribosomal_S19e PF01090.19 ORF97937 - 5.3e-54 181.6 0.1 8.9e-54 180.9 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein S19e Helicase_C PF00271.31 ORF97937 - 1.4e-21 76.9 0.0 3.1e-21 75.8 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HTH_12 PF08461.10 ORF97937 - 0.00067 19.6 0.3 0.0025 17.7 0.2 2.0 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain Baculo_PEP_C PF04513.12 ORF95470 - 0.049 13.7 1.3 3.6 7.6 0.0 2.7 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus YopE PF03545.13 ORF95470 - 0.09 13.0 0.0 0.39 10.9 0.0 2.1 1 0 0 1 1 1 0 Yersinia virulence determinant (YopE) FlaC_arch PF05377.11 ORF95470 - 0.58 10.6 9.0 5.6 7.4 0.6 4.4 4 0 0 4 4 4 0 Flagella accessory protein C (FlaC) YojJ PF10372.9 ORF95470 - 1.9 8.7 6.1 6.6 6.9 0.2 3.7 2 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus CREPT PF16566.5 ORF95470 - 6.8 6.9 27.3 2.6 8.2 5.5 4.0 2 1 1 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour Circo_capsid PF02443.15 ORF89921 - 0.42 10.2 5.0 0.85 9.2 5.0 1.5 1 0 0 1 1 1 0 Circovirus capsid protein PS_pyruv_trans PF04230.13 ORF79262 - 3.2e-40 138.9 0.0 4.7e-40 138.3 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide pyruvyl transferase Sortase PF04203.13 ORF79262 - 0.015 15.1 0.1 0.042 13.6 0.1 1.6 1 1 0 1 1 1 0 Sortase domain OSTbeta PF15048.6 ORF68932 - 0.14 12.3 0.1 0.61 10.2 0.0 2.1 2 0 0 2 2 2 0 Organic solute transporter subunit beta protein DAO PF01266.24 ORF66480 - 1.4e-55 189.3 0.3 1.6e-55 189.1 0.3 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 ORF66480 - 4.9e-07 29.2 0.2 8.5e-07 28.4 0.2 1.4 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.6 ORF66480 - 6.8e-06 26.2 0.7 2.6e-05 24.3 0.7 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 ORF66480 - 1.4e-05 24.6 0.6 1.4e-05 24.6 0.6 1.7 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 ORF66480 - 5.1e-05 22.7 1.7 0.021 14.1 0.2 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF66480 - 8.4e-05 21.8 1.7 0.00014 21.1 1.7 1.3 1 0 0 1 1 1 1 FAD binding domain Amino_oxidase PF01593.24 ORF66480 - 0.00015 21.2 0.5 0.0029 16.9 0.2 2.1 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Pyr_redox_2 PF07992.14 ORF66480 - 0.00017 21.0 0.2 0.00038 19.8 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF66480 - 0.00046 19.4 0.4 0.011 14.8 0.1 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A UDPG_MGDP_dh_N PF03721.14 ORF66480 - 0.00097 18.8 0.4 0.0016 18.0 0.4 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_oxidored PF12831.7 ORF66480 - 0.0047 16.3 0.2 0.0067 15.8 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 ORF66480 - 0.0085 14.8 0.6 0.028 13.1 0.1 1.9 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.27 ORF66480 - 0.0094 16.5 0.3 0.021 15.4 0.3 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 ORF66480 - 0.024 15.1 0.0 0.049 14.1 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding Lycopene_cycl PF05834.12 ORF66480 - 0.041 12.9 2.1 0.041 12.9 0.4 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein ApbA PF02558.16 ORF66480 - 0.056 13.1 0.4 3.8 7.2 0.2 2.2 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Trp_halogenase PF04820.14 ORF66480 - 0.079 11.8 0.1 0.11 11.3 0.1 1.2 1 0 0 1 1 1 0 Tryptophan halogenase 3HCDH_N PF02737.18 ORF66480 - 0.11 12.4 0.6 0.22 11.4 0.6 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 ORF66480 - 0.31 11.0 0.0 0.31 11.0 0.0 2.1 3 0 0 3 3 3 0 FAD-NAD(P)-binding Ank_2 PF12796.7 ORF62035 - 9e-56 186.4 5.9 1.2e-11 45.1 0.1 5.6 2 2 5 7 7 7 7 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF62035 - 3e-44 148.9 8.3 4.1e-09 36.8 0.1 7.7 3 2 5 8 8 8 8 Ankyrin repeats (many copies) Ank PF00023.30 ORF62035 - 2.8e-29 100.2 3.5 0.071 13.6 0.1 11.2 9 1 2 11 11 11 8 Ankyrin repeat Ank_3 PF13606.6 ORF62035 - 4.9e-26 87.9 0.9 0.054 14.1 0.0 11.5 11 1 1 12 12 12 7 Ankyrin repeat Ank_5 PF13857.6 ORF62035 - 2.1e-25 88.5 13.1 0.00014 22.0 0.0 9.0 4 3 6 10 10 10 8 Ankyrin repeats (many copies) MFS_1 PF07690.16 ORF57512 - 3.2e-18 65.8 19.6 3.2e-18 65.8 19.6 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily PAP_assoc PF03828.19 ORF55768 - 2.1e-13 50.3 0.0 3.7e-13 49.5 0.0 1.5 1 0 0 1 1 1 1 Cid1 family poly A polymerase Nucleoside_tran PF01733.18 ORF51445 - 8.7e-22 77.9 3.9 1.4e-21 77.2 3.9 1.3 1 0 0 1 1 1 1 Nucleoside transporter Peptidase_S10 PF00450.22 ORF44240 - 5.5e-85 286.3 1.6 6.8e-85 286.0 1.6 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_M16 PF00675.20 ORF40734 - 2e-50 170.7 0.1 4.7e-50 169.4 0.0 1.6 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 ORF40734 - 3e-28 99.1 0.0 6.6e-28 97.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase M16 inactive domain TT_ORF2 PF02957.15 ORF35676 - 0.22 12.5 3.3 0.39 11.6 3.3 1.3 1 0 0 1 1 1 0 TT viral ORF2 DUF3439 PF11921.8 ORF35676 - 4.8 7.2 17.7 1.8 8.5 9.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) Mucin PF01456.17 ORF35676 - 6.8 6.7 21.4 1.3 9.0 11.1 2.4 2 0 0 2 2 2 0 Mucin-like glycoprotein Ion_trans PF00520.31 ORF33099 - 5.4e-17 61.8 20.1 8.2e-17 61.2 20.1 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF33099 - 0.0049 16.7 0.3 0.073 13.0 0.1 2.7 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF33099 - 0.083 12.5 0.1 0.27 10.9 0.1 2.0 1 0 0 1 1 1 0 EF hand Myb_DNA-bind_2 PF08914.11 ORF18400 - 0.14 12.4 0.3 0.14 12.4 0.3 2.0 2 0 0 2 2 2 0 Rap1 Myb domain Glyco_hydro_30 PF02055.16 ORF13397 - 1.4e-64 218.3 0.0 3.9e-42 144.5 0.0 2.0 2 0 0 2 2 2 2 Glycosyl hydrolase family 30 TIM-barrel domain Glyco_hydro_30C PF17189.4 ORF13397 - 1.2e-12 47.9 0.0 3.7e-12 46.3 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolase family 30 beta sandwich domain Glyco_hydro_59 PF02057.15 ORF13397 - 1.9e-05 24.1 0.0 2.9e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 59 Aminotran_3 PF00202.21 ORF111390 - 2.3e-80 270.3 0.0 2.9e-80 269.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III TT_ORF2 PF02957.15 ORF103648 - 0.26 12.2 3.5 0.46 11.4 3.5 1.3 1 0 0 1 1 1 0 TT viral ORF2 DUF3439 PF11921.8 ORF103648 - 4.9 7.1 17.7 1.8 8.5 9.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) Mucin PF01456.17 ORF103648 - 7.1 6.6 21.4 1.4 8.9 11.2 2.4 2 0 0 2 2 2 0 Mucin-like glycoprotein Semialdhyde_dhC PF02774.18 ORF101681 - 3.4e-45 154.4 0.0 5.2e-45 153.8 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 ORF101681 - 9.8e-23 80.9 0.0 2.2e-22 79.8 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_C PF02800.20 ORF101681 - 0.00028 20.5 0.1 0.0013 18.3 0.1 2.0 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DUF4918 PF16265.5 ORF100546 - 0.039 13.5 0.2 0.064 12.8 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) Tetraspanin PF00335.20 NODE_11931_length_1275_cov_143.228226_g8877_i0reverse_frame_1 - 6.4e-12 45.7 2.9 4.8e-10 39.5 1.5 2.5 2 1 0 2 2 2 2 Tetraspanin family SpoIIIAH PF12685.7 NODE_11931_length_1275_cov_143.228226_g8877_i0reverse_frame_1 - 0.0023 17.8 2.6 0.0043 16.9 2.6 1.4 1 0 0 1 1 1 1 SpoIIIAH-like protein FAM176 PF14851.6 NODE_11931_length_1275_cov_143.228226_g8877_i0reverse_frame_1 - 0.02 14.5 1.5 0.026 14.2 0.3 1.8 2 0 0 2 2 2 0 FAM176 family COX6C PF02937.15 NODE_11931_length_1275_cov_143.228226_g8877_i0forward_frame_1 - 4.5 7.5 7.7 0.58 10.3 1.3 2.8 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VIc Syja_N PF02383.18 ORF97702 - 2.3e-78 263.8 3.7 2.9e-78 263.4 3.7 1.1 1 0 0 1 1 1 1 SacI homology domain CAP_C PF08603.11 ORF97513 - 7.5e-36 123.1 6.2 1.1e-35 122.5 6.2 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) C terminal CAP_N PF01213.19 ORF97513 - 3.9e-20 72.6 0.0 5e-20 72.2 0.0 1.1 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal TBCC PF07986.12 ORF97513 - 7.2e-09 35.4 4.3 1.2e-08 34.7 4.3 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C FRG1 PF06229.12 ORF97375 - 0.032 13.9 0.2 0.066 12.9 0.2 1.5 1 0 0 1 1 1 0 FRG1-like domain PPR_2 PF13041.6 ORF91523 - 7.6e-52 173.3 0.2 1.2e-09 38.1 0.0 8.4 1 1 8 9 9 9 8 PPR repeat family PPR PF01535.20 ORF91523 - 3.4e-40 133.5 0.6 2.6e-06 27.3 0.0 10.2 10 0 0 10 10 10 7 PPR repeat PPR_3 PF13812.6 ORF91523 - 4.2e-37 126.1 0.0 6.5e-11 42.1 0.0 5.6 5 0 0 5 5 5 4 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF91523 - 1.3e-35 120.8 0.0 1.3e-06 28.0 0.0 8.7 8 0 0 8 8 8 6 PPR repeat PPR_long PF17177.4 ORF91523 - 7.5e-29 100.6 2.0 1.3e-15 57.4 0.2 3.4 1 1 2 3 3 3 3 Pentacotripeptide-repeat region of PRORP TPR_4 PF07721.14 ORF91523 - 1.7e-05 25.0 18.2 4.5 8.2 0.7 7.4 7 0 0 7 7 7 2 Tetratricopeptide repeat Wzy_C_2 PF11846.8 ORF91523 - 0.00018 21.5 0.5 0.67 9.8 0.0 4.4 1 1 3 5 5 5 1 Virulence factor membrane-bound polymerase, C-terminal TPR_19 PF14559.6 ORF91523 - 0.0021 18.5 9.8 1.9 9.1 0.1 5.1 3 2 3 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF91523 - 0.003 18.2 24.0 1.6 9.8 0.0 8.2 6 4 4 10 10 8 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF91523 - 0.035 14.1 4.3 33 4.8 0.0 4.8 6 0 0 6 6 5 0 Tetratricopeptide repeat COX5A PF02284.16 ORF91523 - 0.049 13.6 0.6 1.2 9.2 0.0 3.0 2 2 2 4 4 4 0 Cytochrome c oxidase subunit Va TPR_8 PF13181.6 ORF91523 - 0.062 13.5 0.2 42 4.7 0.0 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF91523 - 0.094 12.1 2.9 0.11 11.9 0.4 2.2 1 1 1 2 2 2 0 MalT-like TPR region TPR_6 PF13174.6 ORF91523 - 0.097 13.4 8.5 7.6 7.4 0.0 5.4 6 0 0 6 6 5 0 Tetratricopeptide repeat Rcd1 PF04078.13 ORF91523 - 0.16 11.3 0.0 1.3 8.3 0.0 2.0 2 0 0 2 2 2 0 Cell differentiation family, Rcd1-like TPR_2 PF07719.17 ORF91523 - 3.3 8.1 7.5 41 4.6 0.1 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat POT1 PF02765.17 ORF85835 - 2.1e-27 95.7 0.2 3.4e-24 85.3 0.1 2.5 2 0 0 2 2 2 2 Telomeric single stranded DNA binding POT1/CDC13 RCC1 PF00415.18 ORF85669 - 2.9e-41 139.9 13.8 3.4e-09 37.2 0.0 7.3 7 1 0 7 7 7 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF85669 - 4.6e-13 48.6 36.3 0.00017 21.3 0.8 7.4 7 1 0 7 7 7 5 Regulator of chromosome condensation (RCC1) repeat NICE-1 PF15845.5 ORF85669 - 2.8 8.8 8.4 3.5 8.5 0.1 3.3 3 0 0 3 3 3 0 Cysteine-rich C-terminal 1 family VDE PF07137.11 ORF84531 - 1.5e-31 109.7 0.0 2.5e-31 109.0 0.0 1.3 1 0 0 1 1 1 1 VDE lipocalin domain Glycos_transf_N PF04413.16 ORF80320 - 9.7e-70 233.8 0.0 5.6e-69 231.4 0.0 2.0 2 0 0 2 2 2 1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Glycos_transf_1 PF00534.20 ORF80320 - 1.3e-05 24.8 0.0 2.4e-05 23.9 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF80320 - 0.016 15.6 0.2 0.11 12.9 0.1 2.3 1 1 1 2 2 2 0 Glycosyl transferases group 1 LysR_substrate PF03466.20 ORF80320 - 0.019 14.3 3.9 5 6.4 0.0 3.5 3 1 1 4 4 4 0 LysR substrate binding domain Glyco_transf_4 PF13439.6 ORF80320 - 0.044 13.8 0.2 0.15 12.1 0.1 2.0 2 0 0 2 2 2 0 Glycosyltransferase Family 4 Glyco_hydro_7 PF00840.20 ORF79056 - 2.2e-10 39.9 1.4 9.4e-05 21.3 0.0 5.0 2 2 2 4 4 4 3 Glycosyl hydrolase family 7 Somatomedin_B PF01033.17 ORF79056 - 1.1e-05 25.7 47.3 0.0007 19.9 19.6 4.2 3 2 1 4 4 4 2 Somatomedin B domain CAP_C PF08603.11 ORF78718 - 7.5e-36 123.1 6.2 1.1e-35 122.5 6.2 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) C terminal CAP_N PF01213.19 ORF78718 - 3.9e-20 72.6 0.0 5e-20 72.2 0.0 1.1 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal TBCC PF07986.12 ORF78718 - 7.2e-09 35.4 4.3 1.2e-08 34.7 4.3 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C RNase_H PF00075.24 ORF76859 - 2.6e-14 53.6 0.1 4.1e-14 53.0 0.1 1.3 1 0 0 1 1 1 1 RNase H Thioesterase PF00975.20 ORF66917 - 7.2e-08 32.8 0.0 1.1e-07 32.3 0.0 1.5 1 1 0 1 1 1 1 Thioesterase domain Abhydrolase_6 PF12697.7 ORF66917 - 2.3e-05 25.1 0.0 4.7e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 Alpha/beta hydrolase family FSH1 PF03959.13 ORF66917 - 0.063 12.9 0.0 0.19 11.4 0.0 1.6 1 1 0 1 1 1 0 Serine hydrolase (FSH1) GxDLY PF14607.6 ORF59070 - 0.0099 15.7 0.2 0.034 13.9 0.1 2.0 1 1 0 1 1 1 1 N-terminus of Esterase_SGNH_hydro-type RL11D PF11088.8 ORF59070 - 0.09 13.1 4.1 2.1 8.7 0.1 3.4 3 0 0 3 3 3 0 Glycoprotein encoding membrane proteins RL5A and RL6 Imm59 PF15597.6 ORF59070 - 0.17 12.4 0.1 0.17 12.4 0.1 3.5 4 0 0 4 4 4 0 Immunity protein 59 PPR_2 PF13041.6 ORF57156 - 1.2e-21 76.6 4.8 0.00045 20.4 0.0 8.2 4 3 5 9 9 9 5 PPR repeat family PPR_3 PF13812.6 ORF57156 - 2.4e-17 62.8 0.0 3.9e-07 30.1 0.0 5.3 3 2 3 6 6 6 5 Pentatricopeptide repeat domain PPR PF01535.20 ORF57156 - 6e-15 54.4 12.6 0.0028 17.8 0.0 8.3 8 0 0 8 8 8 4 PPR repeat PPR_long PF17177.4 ORF57156 - 6.3e-09 35.5 1.5 4.4e-05 23.0 0.2 3.2 1 1 3 4 4 4 3 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF57156 - 5.9e-05 22.7 7.2 0.048 13.4 0.0 5.6 6 1 0 6 6 6 1 PPR repeat TPR_1 PF00515.28 ORF57156 - 0.02 14.7 4.0 4 7.4 0.0 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF57156 - 0.039 14.1 5.3 7.3 7.0 0.0 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF57156 - 0.091 13.6 10.1 0.77 10.7 0.1 5.6 7 1 1 8 8 6 0 Tetratricopeptide repeat Phage_ABA_S PF18066.1 ORF57156 - 0.1 13.3 0.5 8.8 7.1 0.0 3.1 1 1 2 3 3 3 0 Phage ABA sandwich domain DUF3677 PF12432.8 ORF57156 - 0.14 12.5 0.2 0.54 10.6 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3677) TPR_6 PF13174.6 ORF57156 - 3.1 8.6 5.6 12 6.8 0.2 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks23.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks23.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks23.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks23.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YcaO_C PF18381.1 NODE_56814_length_299_cov_2.162879_g48876_i0forward_frame_2 - 1.1e-36 126.3 0.2 1.2e-36 126.2 0.2 1.0 1 0 0 1 1 1 1 YcaO cyclodehydratase C-terminal domain SPOR PF05036.13 NODE_56814_length_299_cov_2.162879_g48876_i0forward_frame_2 - 0.17 12.3 0.0 0.33 11.4 0.0 1.5 2 0 0 2 2 2 0 Sporulation related domain Presenilin PF01080.17 NODE_56813_length_299_cov_2.219697_g48875_i0forward_frame_2 - 0.26 10.0 7.2 0.23 10.2 7.2 1.0 1 0 0 1 1 1 0 Presenilin LacI PF00356.21 NODE_56811_length_299_cov_2.257576_g48873_i0forward_frame_3 - 4.1e-12 45.7 0.8 4.1e-12 45.7 0.8 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family HTH_3 PF01381.22 NODE_56811_length_299_cov_2.257576_g48873_i0forward_frame_3 - 0.00022 21.2 0.0 0.00047 20.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 NODE_56811_length_299_cov_2.257576_g48873_i0forward_frame_3 - 0.089 13.1 0.1 0.12 12.7 0.0 1.4 2 0 0 2 2 2 0 Helix-turn-helix domain A1_Propeptide PF07966.12 NODE_56810_length_299_cov_2.268939_g48872_i0forward_frame_2 - 0.088 12.7 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 A1 Propeptide MCM_OB PF17207.3 NODE_56809_length_299_cov_2.314394_g48871_i0reverse_frame_2 - 4.2e-20 71.9 0.0 7.3e-20 71.1 0.0 1.3 1 1 1 2 2 2 1 MCM OB domain Reoviridae_Vp9 PF08978.10 NODE_56809_length_299_cov_2.314394_g48871_i0reverse_frame_2 - 0.075 12.2 0.1 0.098 11.8 0.1 1.1 1 0 0 1 1 1 0 Reoviridae VP9 RcpC PF16976.5 NODE_56809_length_299_cov_2.314394_g48871_i0reverse_frame_2 - 0.14 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Flp pilus assembly protein RcpC/CpaB HrpB7 PF09486.10 NODE_56805_length_299_cov_2.431818_g48867_i0reverse_frame_3 - 0.008 16.6 0.7 0.21 12.0 0.1 2.0 1 1 1 2 2 2 2 Bacterial type III secretion protein (HrpB7) Laminin_II PF06009.12 NODE_56805_length_299_cov_2.431818_g48867_i0reverse_frame_3 - 0.03 14.3 0.0 0.036 14.1 0.0 1.0 1 0 0 1 1 1 0 Laminin Domain II TolA_bind_tri PF16331.5 NODE_56805_length_299_cov_2.431818_g48867_i0reverse_frame_3 - 0.057 13.5 2.4 0.37 10.9 0.7 2.2 2 0 0 2 2 2 0 TolA binding protein trimerisation Apolipoprotein PF01442.18 NODE_56805_length_299_cov_2.431818_g48867_i0reverse_frame_3 - 0.28 11.0 3.3 0.46 10.3 3.3 1.3 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain TraL PF07178.11 NODE_56803_length_299_cov_2.640152_g48865_i0forward_frame_2 - 0.75 10.3 3.7 21 5.7 0.0 2.0 1 1 1 2 2 2 0 TraL protein cNMP_binding PF00027.29 NODE_56801_length_299_cov_2.689394_g48863_i0reverse_frame_2 - 3.6e-13 49.4 0.0 4.3e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DHBP_synthase PF00926.19 NODE_56801_length_299_cov_2.689394_g48863_i0forward_frame_2 - 0.13 11.8 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 3,4-dihydroxy-2-butanone 4-phosphate synthase MFS_1 PF07690.16 NODE_56800_length_299_cov_2.727273_g48862_i0reverse_frame_2 - 0.00049 19.1 0.3 0.00063 18.8 0.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Na_H_Exchanger PF00999.21 NODE_56796_length_299_cov_2.912879_g48858_i0forward_frame_3 - 0.0084 14.9 0.1 0.01 14.7 0.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Succ_CoA_lig PF13607.6 NODE_56795_length_299_cov_3.064394_g48857_i0reverse_frame_3 - 0.052 13.3 0.0 0.095 12.5 0.0 1.4 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain Chordopox_A30L PF06015.12 NODE_56792_length_299_cov_3.727273_g48854_i0reverse_frame_2 - 0.093 12.6 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Chordopoxvirus A30L protein DSBA PF01323.20 NODE_56791_length_299_cov_3.893939_g48853_i0forward_frame_2 - 1.1e-12 48.1 0.2 1.6e-11 44.3 0.2 1.9 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 NODE_56791_length_299_cov_3.893939_g48853_i0forward_frame_2 - 0.00067 19.8 0.0 0.00079 19.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin PF00085.20 NODE_56791_length_299_cov_3.893939_g48853_i0forward_frame_2 - 0.033 14.2 0.1 0.037 14.0 0.1 1.3 1 1 0 1 1 1 0 Thioredoxin DUF3088 PF11287.8 NODE_56791_length_299_cov_3.893939_g48853_i0forward_frame_2 - 0.067 13.0 0.0 0.093 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3088) MukB PF04310.12 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 9e-54 182.7 0.1 9.7e-54 182.6 0.1 1.0 1 0 0 1 1 1 1 MukB N-terminal FTO_NTD PF12933.7 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 0.011 15.0 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 0 FTO catalytic domain AAA_29 PF13555.6 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 0.05 13.4 0.0 0.079 12.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain Chlorophyllase2 PF12740.7 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 0.12 11.3 0.0 0.15 10.9 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase enzyme AAA_23 PF13476.6 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 0.18 12.3 0.0 0.18 12.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain Syd PF07348.12 NODE_56790_length_299_cov_3.893939_g48852_i0forward_frame_2 - 0.17 11.6 0.1 0.18 11.4 0.1 1.1 1 0 0 1 1 1 0 Syd protein (SUKH-2) DUF1836 PF08876.11 NODE_56787_length_299_cov_4.780303_g48849_i0forward_frame_2 - 0.0034 17.4 3.7 0.005 16.9 3.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1836) ParcG PF10274.9 NODE_56786_length_299_cov_5.696970_g48848_i0reverse_frame_3 - 0.00037 20.7 0.3 0.00044 20.4 0.3 1.2 1 0 0 1 1 1 1 Parkin co-regulated protein ATG13 PF10033.9 NODE_56785_length_299_cov_5.753788_g48847_i0forward_frame_3 - 0.02 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 Autophagy-related protein 13 TA_inhibitor PF17574.2 NODE_56785_length_299_cov_5.753788_g48847_i0forward_frame_2 - 0.13 12.3 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Inhibitor of toxin/antitoxin system (Gp4.5) UL42 PF17638.2 NODE_56784_length_299_cov_45.871212_g48846_i0forward_frame_2 - 0.016 15.2 0.0 0.017 15.1 0.0 1.1 1 0 0 1 1 1 0 HCMV UL42 MreB_Mbl PF06723.13 NODE_56778_length_299_cov_58.708333_g48840_i0forward_frame_2 - 0.13 11.0 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 MreB/Mbl protein FdtA PF05523.11 NODE_56777_length_299_cov_61.556818_g48839_i0reverse_frame_2 - 0.096 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 WxcM-like, C-terminal TPR_MLP1_2 PF07926.12 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.0035 17.4 17.2 0.0037 17.3 17.2 1.0 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein TEX12 PF15219.6 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.018 15.4 6.7 0.041 14.2 6.7 1.5 1 1 1 2 2 2 0 Testis-expressed 12 RseA_C PF03873.13 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.024 14.9 0.1 0.068 13.4 0.1 1.8 1 0 0 1 1 1 0 Anti sigma-E protein RseA, C-terminal domain Cep57_CLD_2 PF14197.6 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.026 14.6 13.6 0.13 12.4 6.4 2.2 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 Jnk-SapK_ap_N PF09744.9 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.061 13.5 17.1 0.15 12.2 17.1 1.6 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 MCC-bdg_PDZ PF10506.9 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.084 12.9 0.7 0.084 12.9 0.7 2.8 1 1 1 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF3072 PF11272.8 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.11 12.4 1.5 0.31 11.0 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3072) DivIC PF04977.15 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.14 11.9 15.8 0.031 14.1 6.8 2.5 1 1 1 2 2 2 0 Septum formation initiator Leu_zip PF15294.6 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.3 10.6 16.8 0.36 10.3 16.8 1.1 1 0 0 1 1 1 0 Leucine zipper Lectin_N PF03954.14 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.3 10.8 8.5 0.081 12.7 3.2 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain DUF2570 PF10828.8 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.54 10.1 15.1 1.6 8.6 7.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) MCU PF04678.13 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 1.4 9.0 4.9 1.5 8.9 4.0 1.5 1 1 0 1 1 1 0 Mitochondrial calcium uniporter FapA PF03961.13 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 1.8 7.1 16.0 1.9 7.0 16.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A ACCA PF03255.14 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 1.8 8.4 11.2 0.3 11.0 5.2 1.9 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Fzo_mitofusin PF04799.13 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 2.3 7.8 9.3 16 5.0 9.2 2.0 1 1 0 1 1 1 0 fzo-like conserved region Swi5 PF07061.11 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 2.6 8.2 14.1 0.38 10.9 5.1 2.3 1 1 1 2 2 2 0 Swi5 bZIP_1 PF00170.21 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 3.3 7.9 20.7 1.9 8.7 2.1 3.0 1 1 2 3 3 3 0 bZIP transcription factor Nas2_N PF18265.1 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 5.7 6.9 10.1 1.4 8.9 1.0 2.9 1 1 2 3 3 3 0 Nas2 N_terminal domain DUF5320 PF17253.2 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 8.3 7.6 10.3 2.7 9.1 1.6 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Spc24 PF08286.11 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 8.6 6.7 18.1 2.1 8.6 11.6 2.6 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 ING PF12998.7 NODE_56772_length_299_cov_68.556818_g48834_i0forward_frame_2 - 0.035 14.7 0.4 0.049 14.2 0.4 1.3 1 1 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding MCR_alpha_N PF02745.15 NODE_56771_length_299_cov_68.924242_g48833_i0forward_frame_3 - 0.014 14.7 0.1 0.019 14.4 0.1 1.2 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, N-terminal domain PRIMA1 PF16101.5 NODE_56769_length_299_cov_70.795455_g48831_i0reverse_frame_3 - 0.0077 16.3 0.9 0.011 15.8 0.9 1.3 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 Metallothio_Pro PF02069.16 NODE_56769_length_299_cov_70.795455_g48831_i0reverse_frame_2 - 0.066 13.5 4.5 0.11 12.7 4.5 1.4 1 0 0 1 1 1 0 Prokaryotic metallothionein MyTH4 PF00784.17 NODE_56765_length_299_cov_75.386364_g48827_i0reverse_frame_3 - 0.037 14.5 0.9 0.044 14.3 0.9 1.1 1 0 0 1 1 1 0 MyTH4 domain DUF3332 PF11810.8 NODE_56765_length_299_cov_75.386364_g48827_i0forward_frame_2 - 0.62 9.7 3.7 0.77 9.4 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DUF3762 PF12591.8 NODE_56763_length_299_cov_78.299242_g48825_i0forward_frame_3 - 0.027 14.7 0.1 0.034 14.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3762) HCV_env PF01539.17 NODE_56763_length_299_cov_78.299242_g48825_i0forward_frame_2 - 0.096 12.4 0.2 0.11 12.1 0.2 1.2 1 0 0 1 1 1 0 Hepatitis C virus envelope glycoprotein E1 NOG1_N PF17835.1 NODE_56756_length_299_cov_122.454545_g48818_i0reverse_frame_2 - 0.066 13.2 0.0 0.077 13.0 0.0 1.1 1 0 0 1 1 1 0 NOG1 N-terminal helical domain SF3a60_bindingd PF12108.8 NODE_56754_length_299_cov_133.431818_g48816_i0reverse_frame_3 - 0.17 11.8 0.6 0.28 11.1 0.6 1.4 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain Stealth_CR2 PF11380.8 NODE_56753_length_299_cov_143.295455_g48815_i0forward_frame_2 - 0.072 13.3 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Stealth protein CR2, conserved region 2 B56 PF01603.20 NODE_56751_length_299_cov_205.257576_g48813_i0reverse_frame_3 - 0.041 12.9 0.1 0.046 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein phosphatase 2A regulatory B subunit (B56 family) CBP_BcsN PF17038.5 NODE_56751_length_299_cov_205.257576_g48813_i0reverse_frame_3 - 0.088 12.2 0.1 0.1 12.0 0.1 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsN AgrB PF04647.15 NODE_56751_length_299_cov_205.257576_g48813_i0forward_frame_2 - 0.015 14.6 3.2 0.015 14.6 3.2 1.7 1 1 1 2 2 2 0 Accessory gene regulator B YdjM PF04307.14 NODE_56751_length_299_cov_205.257576_g48813_i0forward_frame_2 - 0.064 12.6 1.9 0.073 12.4 1.9 1.2 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Herpes_LMP1 PF05297.11 NODE_56749_length_299_cov_228.348485_g48811_i0reverse_frame_2 - 0.32 10.2 1.0 0.32 10.1 1.0 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) CDC45 PF02724.14 NODE_56749_length_299_cov_228.348485_g48811_i0reverse_frame_2 - 2.2 6.5 11.6 2.4 6.4 11.6 1.0 1 0 0 1 1 1 0 CDC45-like protein MAPEG PF01124.18 NODE_56748_length_299_cov_228.719697_g48810_i0forward_frame_2 - 0.7 9.8 7.0 0.67 9.9 2.6 2.2 2 0 0 2 2 2 0 MAPEG family zf-RRPl_C4 PF17026.5 NODE_56746_length_299_cov_419.878788_g48808_i0forward_frame_2 - 0.032 14.3 0.2 0.037 14.1 0.2 1.1 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type DUF1199 PF06712.11 NODE_56740_length_300_cov_1.041509_g48802_i0forward_frame_3 - 0.021 14.8 1.0 0.034 14.2 1.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1199) PutA_N PF18083.1 NODE_56739_length_300_cov_1.169811_g48801_i0reverse_frame_3 - 0.038 14.0 0.0 0.068 13.2 0.0 1.5 1 1 1 2 2 2 0 Proline utilization A N-terminal domain Lamprin PF06403.11 NODE_56737_length_300_cov_1.184906_g48799_i0forward_frame_2 - 0.043 13.8 3.4 0.048 13.6 3.4 1.1 1 0 0 1 1 1 0 Lamprin DUF4581 PF15167.6 NODE_56735_length_300_cov_1.358491_g48797_i0forward_frame_3 - 0.017 15.3 0.0 0.018 15.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4581) Orthoreo_P10 PF07204.11 NODE_56735_length_300_cov_1.358491_g48797_i0forward_frame_3 - 2.3 8.3 8.1 0.46 10.5 0.4 2.0 1 1 1 2 2 2 0 Orthoreovirus membrane fusion protein p10 HAUS-augmin3 PF14932.6 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_3 - 0.0049 16.5 0.6 0.0052 16.4 0.6 1.0 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 DUF3486 PF11985.8 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_3 - 0.27 11.6 8.2 0.3 11.5 8.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) DUF3138 PF11336.8 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_3 - 1.5 7.3 6.5 1.7 7.2 6.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) DUF5421 PF17458.2 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_2 - 0.066 12.6 0.0 0.073 12.4 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5421) PHD_4 PF16866.5 NODE_56730_length_300_cov_1.509434_g48792_i0forward_frame_2 - 0.06 13.5 0.0 0.076 13.1 0.0 1.2 1 0 0 1 1 1 0 PHD-finger Runt PF00853.19 NODE_56727_length_300_cov_1.573585_g48789_i0reverse_frame_2 - 0.033 13.7 0.0 0.045 13.3 0.0 1.2 1 0 0 1 1 1 0 Runt domain UCH PF00443.29 NODE_56727_length_300_cov_1.573585_g48789_i0forward_frame_3 - 6.4e-08 32.4 0.0 8.2e-08 32.1 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_56727_length_300_cov_1.573585_g48789_i0forward_frame_3 - 0.06 12.9 0.0 0.065 12.8 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase YvbH_ext PF11724.8 NODE_56726_length_300_cov_1.607547_g48788_i0forward_frame_3 - 0.076 13.4 0.1 1.2 9.5 0.1 2.2 2 0 0 2 2 2 0 YvbH-like oligomerisation region Pkinase PF00069.25 NODE_56726_length_300_cov_1.607547_g48788_i0forward_frame_2 - 1.1e-19 70.8 0.1 1.2e-19 70.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_56726_length_300_cov_1.607547_g48788_i0forward_frame_2 - 4.5e-10 39.3 0.1 5.1e-10 39.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PPDK_N PF01326.19 NODE_56725_length_300_cov_1.618868_g48787_i0forward_frame_3 - 1.2e-07 31.4 0.1 1.5e-07 31.0 0.1 1.1 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DDT PF02791.17 NODE_56724_length_300_cov_1.622642_g48786_i0reverse_frame_3 - 0.12 12.8 0.0 0.14 12.5 0.0 1.4 1 1 0 1 1 1 0 DDT domain VQ PF05678.14 NODE_56724_length_300_cov_1.622642_g48786_i0forward_frame_2 - 0.17 11.4 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 VQ motif Phage_antitermQ PF06530.12 NODE_56721_length_300_cov_1.709434_g48783_i0reverse_frame_2 - 1.9e-10 40.7 0.0 2.4e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Phage antitermination protein Q FBPase_2 PF06874.11 NODE_56720_length_300_cov_1.743396_g48782_i0forward_frame_2 - 0.068 11.4 0.0 0.08 11.2 0.0 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase Ferric_reduct PF01794.19 NODE_56716_length_300_cov_1.800000_g48778_i0forward_frame_3 - 2e-07 31.1 0.2 2.5e-07 30.9 0.2 1.1 1 0 0 1 1 1 1 Ferric reductase like transmembrane component Clavanin PF05452.11 NODE_56716_length_300_cov_1.800000_g48778_i0forward_frame_3 - 0.16 12.2 0.2 0.16 12.2 0.2 1.8 2 0 0 2 2 2 0 Clavanin DUF5621 PF18532.1 NODE_56716_length_300_cov_1.800000_g48778_i0forward_frame_2 - 0.11 12.4 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5621) Noelin-1 PF12308.8 NODE_56713_length_300_cov_1.954717_g48775_i0forward_frame_2 - 0.083 12.9 0.6 0.12 12.3 0.5 1.3 1 1 0 1 1 1 0 Neurogenesis glycoprotein Sec1 PF00995.23 NODE_56712_length_300_cov_1.988679_g48774_i0reverse_frame_2 - 3.7e-16 59.5 0.8 3.9e-16 59.4 0.8 1.0 1 0 0 1 1 1 1 Sec1 family DUF4132 PF13569.6 NODE_56707_length_300_cov_2.098113_g48769_i0forward_frame_3 - 6.3e-11 42.4 0.0 7.5e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4132) IBV_3C PF03620.13 NODE_56706_length_300_cov_2.132075_g48768_i0forward_frame_3 - 0.14 12.6 0.9 1.1 9.8 0.9 2.0 1 1 0 1 1 1 0 IBV 3C protein Baculo_VP91_N PF08475.10 NODE_56703_length_300_cov_2.200000_g48765_i0forward_frame_3 - 0.05 13.3 0.1 0.058 13.1 0.1 1.1 1 0 0 1 1 1 0 Viral capsid protein 91 N-terminal OB_MalK PF17912.1 NODE_56701_length_300_cov_2.237736_g48763_i0forward_frame_3 - 0.00044 21.0 0.0 0.001 19.8 0.0 1.6 1 0 0 1 1 1 1 MalK OB fold domain YjbH PF06082.11 NODE_56698_length_300_cov_2.320755_g48760_i0forward_frame_2 - 2.2e-24 86.3 0.1 2.5e-24 86.1 0.1 1.0 1 0 0 1 1 1 1 Exopolysaccharide biosynthesis protein YbjH YqaJ PF09588.10 NODE_56697_length_300_cov_2.460377_g48759_i0forward_frame_3 - 0.0068 16.6 0.1 0.0081 16.3 0.1 1.1 1 0 0 1 1 1 1 YqaJ-like viral recombinase domain TALPID3 PF15324.6 NODE_56697_length_300_cov_2.460377_g48759_i0forward_frame_3 - 0.035 11.8 0.1 0.039 11.6 0.1 1.0 1 0 0 1 1 1 0 Hedgehog signalling target Synaptobrevin PF00957.21 NODE_56695_length_300_cov_2.490566_g48757_i0forward_frame_3 - 0.19 11.5 0.6 0.27 11.1 0.0 1.5 2 0 0 2 2 2 0 Synaptobrevin Pox_EPC_I2-L1 PF12575.8 NODE_56694_length_300_cov_2.524528_g48756_i0reverse_frame_2 - 0.015 15.5 1.9 0.027 14.7 1.9 1.4 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 Dimerisation2 PF16864.5 NODE_56693_length_300_cov_2.566038_g48755_i0forward_frame_3 - 0.048 13.6 0.1 0.06 13.3 0.1 1.1 1 0 0 1 1 1 0 Dimerisation domain DUF5527 PF17665.1 NODE_56692_length_300_cov_2.577358_g48754_i0reverse_frame_2 - 0.13 11.8 2.1 0.16 11.5 2.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5527) FA_desaturase PF00487.24 NODE_56689_length_300_cov_2.754717_g48751_i0reverse_frame_3 - 5.3 6.8 5.5 5.3 6.8 5.5 1.1 1 0 0 1 1 1 0 Fatty acid desaturase Tubulin_C PF03953.17 NODE_56688_length_300_cov_2.769811_g48750_i0reverse_frame_3 - 0.016 15.4 0.1 0.02 15.1 0.1 1.2 1 0 0 1 1 1 0 Tubulin C-terminal domain Peptidase_A22B PF04258.13 NODE_56687_length_300_cov_2.773585_g48749_i0forward_frame_2 - 1.1e-05 25.2 0.1 1.3e-05 24.9 0.1 1.1 1 0 0 1 1 1 1 Signal peptide peptidase DUF2048 PF09752.9 NODE_56687_length_300_cov_2.773585_g48749_i0forward_frame_2 - 0.051 12.7 0.0 0.052 12.6 0.0 1.0 1 0 0 1 1 1 0 Abhydrolase domain containing 18 DUF1616 PF07760.11 NODE_56686_length_300_cov_2.856604_g48748_i0forward_frame_3 - 0.13 11.6 0.2 0.14 11.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) TPR_2 PF07719.17 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 3.3e-06 26.8 0.6 5.4e-05 23.0 0.2 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 2.1e-05 23.9 0.9 2.2e-05 23.8 0.9 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.00016 21.3 0.3 0.00098 18.8 0.1 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.00019 21.1 0.6 0.0071 16.0 0.1 2.6 3 1 0 3 3 3 1 TPR repeat TPR_14 PF13428.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.0019 18.8 1.2 0.1 13.5 0.2 2.9 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.0049 16.8 0.4 0.13 12.3 0.1 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.016 15.8 0.3 0.72 10.6 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.021 14.9 0.2 0.081 13.0 0.1 1.8 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.039 14.3 0.5 0.074 13.3 0.5 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat TraE PF05309.11 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.12 11.8 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 TraE protein zf-dskA_traR PF01258.17 NODE_56684_length_300_cov_2.883019_g48746_i0reverse_frame_3 - 2.2e-11 43.5 6.8 2.2e-11 43.5 6.8 2.1 2 0 0 2 2 2 1 Prokaryotic dksA/traR C4-type zinc finger DZR PF12773.7 NODE_56684_length_300_cov_2.883019_g48746_i0reverse_frame_3 - 0.024 14.6 1.2 0.024 14.6 1.2 2.1 2 0 0 2 2 2 0 Double zinc ribbon ArfGap PF01412.18 NODE_56684_length_300_cov_2.883019_g48746_i0reverse_frame_3 - 0.74 9.9 6.2 10 6.2 2.0 2.2 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf Hormone_1 PF00103.20 NODE_56683_length_300_cov_3.011321_g48745_i0reverse_frame_2 - 0.1 12.3 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Somatotropin hormone family Gemin7 PF11095.8 NODE_56683_length_300_cov_3.011321_g48745_i0reverse_frame_2 - 0.16 11.9 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Gem-associated protein 7 (Gemin7) Form-deh_trans PF09163.11 NODE_56682_length_300_cov_3.094340_g48744_i0forward_frame_2 - 0.051 13.4 0.4 0.094 12.5 0.4 1.4 1 0 0 1 1 1 0 Formate dehydrogenase N, transmembrane ArAE_2 PF10334.9 NODE_56681_length_300_cov_3.105660_g48743_i0reverse_frame_3 - 0.052 13.4 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 Aromatic acid exporter family member 2 Wzz PF02706.15 NODE_56679_length_300_cov_3.403774_g48741_i0forward_frame_3 - 0.59 10.5 7.2 0.19 12.0 1.5 2.1 2 0 0 2 2 2 0 Chain length determinant protein RCC1_2 PF13540.6 NODE_56677_length_300_cov_3.520755_g48739_i0forward_frame_2 - 0.0059 16.4 3.2 1.1 9.2 0.0 2.6 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat HTH_AsnC-type PF13404.6 NODE_56675_length_300_cov_4.083019_g48737_i0reverse_frame_2 - 0.1 12.5 0.6 0.16 11.8 0.6 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Peptidase_M16_M PF16187.5 NODE_56674_length_300_cov_4.222642_g48736_i0reverse_frame_3 - 8.8e-12 44.9 0.0 1.1e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Middle or third domain of peptidase_M16 TFB6 PF17110.5 NODE_56673_length_300_cov_4.305660_g48735_i0reverse_frame_2 - 0.13 12.0 0.6 0.17 11.6 0.6 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH HP0268 PF18618.1 NODE_56670_length_300_cov_20.596226_g48732_i0forward_frame_2 - 0.036 14.5 1.2 0.041 14.3 0.2 1.6 2 0 0 2 2 2 0 HP0268 Herpes_UL95 PF03038.14 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_2 - 0.016 14.4 0.5 0.016 14.3 0.5 1.1 1 0 0 1 1 1 0 UL95 family UPF0122 PF04297.14 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_2 - 0.042 14.1 2.7 0.061 13.6 2.7 1.2 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like Lectin_C PF00059.21 NODE_56668_length_300_cov_38.109434_g48730_i0forward_frame_3 - 0.0099 16.6 0.3 0.012 16.3 0.3 1.2 1 0 0 1 1 1 1 Lectin C-type domain Tachystatin_B PF11478.8 NODE_56662_length_300_cov_53.460377_g48724_i0forward_frame_3 - 0.0069 16.3 3.3 0.014 15.3 3.3 1.5 1 0 0 1 1 1 1 Antimicrobial chitin binding protein tachystatin B PSP1 PF04468.12 NODE_56660_length_300_cov_54.362264_g48722_i0forward_frame_2 - 0.084 13.2 0.2 0.14 12.4 0.2 1.5 1 0 0 1 1 1 0 PSP1 C-terminal conserved region BPS1 PF05633.11 NODE_56659_length_300_cov_57.762264_g48721_i0reverse_frame_2 - 6.3 5.7 6.3 7.2 5.5 6.3 1.1 1 0 0 1 1 1 0 Protein BYPASS1-related DUF4489 PF14879.6 NODE_56658_length_300_cov_58.596226_g48720_i0reverse_frame_3 - 0.013 15.7 0.3 0.013 15.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4489) SPW PF03779.14 NODE_56657_length_300_cov_58.803774_g48719_i0reverse_frame_2 - 0.057 13.0 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 SPW repeat DUF3989 PF13150.6 NODE_56655_length_300_cov_60.286792_g48717_i0forward_frame_2 - 0.0005 19.7 0.3 0.00086 19.0 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3989) RNase_T PF00929.24 NODE_56653_length_300_cov_67.950943_g48715_i0forward_frame_3 - 2.6e-07 31.3 0.6 3e-07 31.1 0.6 1.1 1 0 0 1 1 1 1 Exonuclease DUF4099 PF13351.6 NODE_56653_length_300_cov_67.950943_g48715_i0forward_frame_3 - 0.0058 16.9 0.4 0.0083 16.4 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4099) zf-met PF12874.7 NODE_56651_length_300_cov_70.011321_g48713_i0forward_frame_2 - 0.065 13.7 0.4 0.097 13.1 0.4 1.3 1 0 0 1 1 1 0 Zinc-finger of C2H2 type IF3_C PF00707.22 NODE_56645_length_300_cov_90.501887_g48707_i0reverse_frame_3 - 0.0077 16.2 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain IFT57 PF10498.9 NODE_56640_length_300_cov_123.633962_g48702_i0reverse_frame_2 - 0.022 13.7 0.8 0.025 13.6 0.8 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 LuxE PF04443.12 NODE_56640_length_300_cov_123.633962_g48702_i0forward_frame_3 - 0.08 12.0 0.0 0.097 11.7 0.0 1.0 1 0 0 1 1 1 0 Acyl-protein synthetase, LuxE DUF4774 PF15999.5 NODE_56638_length_300_cov_133.215094_g48700_i0forward_frame_2 - 0.007 16.2 0.2 0.0093 15.8 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4774) DUF5543 PF17697.1 NODE_56636_length_300_cov_153.641509_g48698_i0reverse_frame_3 - 0.63 10.3 4.9 0.27 11.5 1.5 2.0 1 1 2 3 3 3 0 Family of unknown function (DUF5543) RCC1_2 PF13540.6 NODE_56636_length_300_cov_153.641509_g48698_i0forward_frame_3 - 0.00014 21.6 2.3 0.21 11.4 0.2 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 NODE_56636_length_300_cov_153.641509_g48698_i0forward_frame_3 - 0.46 10.5 6.4 2.6 8.1 1.1 2.3 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Churchill PF06573.11 NODE_56632_length_300_cov_220.003774_g48694_i0forward_frame_3 - 0.081 13.3 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Churchill protein OCRE PF17780.1 NODE_56626_length_300_cov_359.539623_g48688_i0forward_frame_3 - 0.1 12.6 0.0 0.35 10.9 0.0 1.7 2 0 0 2 2 2 0 OCRE domain MORN PF02493.20 NODE_56622_length_300_cov_1309.305660_g48684_i0forward_frame_3 - 2.1e-18 65.0 18.6 2.2e-07 30.4 1.7 3.6 4 0 0 4 4 4 3 MORN repeat DUF1556 PF07590.11 NODE_56621_length_300_cov_2126.645283_g48683_i0forward_frame_3 - 0.18 12.1 0.3 0.18 12.1 0.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1556) Importin_rep_3 PF18806.1 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_3 - 0.016 15.3 1.0 1.1 9.3 0.2 2.6 2 1 0 2 2 2 0 Importin 13 repeat Ten1_2 PF15490.6 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_3 - 0.033 13.9 2.5 3.9 7.2 0.2 2.1 1 1 0 2 2 2 0 Telomere-capping, CST complex subunit DUF1308 PF07000.11 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_3 - 0.13 12.1 0.1 1.5 8.7 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1308) HTH_17 PF12728.7 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_2 - 0.00059 20.0 0.2 0.00098 19.3 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain rOmpB PF12334.8 NODE_56619_length_300_cov_8233.116981_g48681_i0forward_frame_2 - 0.0072 15.8 0.1 3.2 7.2 0.0 2.1 2 0 0 2 2 2 2 Rickettsia outer membrane protein B zf-TRAF PF02176.18 NODE_56618_length_300_cov_72673.581132_g48680_i0reverse_frame_2 - 0.09 13.5 3.1 0.17 12.6 1.6 2.0 1 1 1 2 2 2 0 TRAF-type zinc finger NapE PF06796.11 NODE_56617_length_300_cov_72682.732075_g48679_i0forward_frame_2 - 8.4 6.0 10.6 2.7 7.6 0.9 2.3 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE UCR_hinge PF02320.16 ORF99939 - 0.00085 19.5 0.4 0.083 13.1 0.2 2.1 2 0 0 2 2 2 2 Ubiquinol-cytochrome C reductase hinge protein DUF5527 PF17665.1 ORF99485 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) Penaeidin PF05927.11 ORF9855 - 0.089 13.6 1.3 0.093 13.5 0.3 1.6 2 0 0 2 2 2 0 Penaeidin SpoIIID PF12116.8 ORF98515 - 0.02 15.0 0.2 0.029 14.4 0.2 1.4 1 1 0 1 1 1 0 Stage III sporulation protein D RNase_J_C PF17770.1 ORF98515 - 0.083 14.0 0.5 0.14 13.2 0.2 1.5 1 1 0 1 1 1 0 Ribonuclease J C-terminal domain DEC-1_N PF04625.13 ORF97910 - 0.031 13.3 0.1 0.035 13.1 0.1 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region TMEM208_SND2 PF05620.11 ORF97313 - 9.4e-13 48.3 0.6 1.1e-12 48.0 0.6 1.1 1 0 0 1 1 1 1 SRP-independent targeting protein 2/TMEM208 Selenoprotein_S PF06936.11 ORF97313 - 0.023 14.5 3.4 0.041 13.7 3.4 1.4 1 1 0 1 1 1 0 Selenoprotein S (SelS) MKRN1_C PF15815.5 ORF97047 - 0.13 12.7 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase makorin-1, C-terminal Keratin_matx PF04579.12 ORF96575 - 0.023 15.0 4.7 0.03 14.6 4.7 1.3 1 1 0 1 1 1 0 Keratin, high-sulphur matrix protein Toxin_7 PF05980.12 ORF96575 - 2.7 8.3 13.2 1.6 9.0 9.7 2.3 2 1 0 2 2 2 0 Toxin 7 CX9C PF16860.5 ORF96063 - 0.033 14.2 0.0 5.5 7.1 0.0 2.1 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, GBV-C_env PF12786.7 ORF94668 - 0.064 11.9 0.1 0.077 11.7 0.1 1.0 1 0 0 1 1 1 0 GB virus C genotype envelope DPM3 PF08285.11 ORF93354 - 0.02 15.0 0.5 0.028 14.6 0.5 1.2 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) BNR_assoc_N PF14873.6 ORF9286 - 0.0037 17.0 0.1 0.0042 16.8 0.1 1.1 1 0 0 1 1 1 1 N-terminal domain of BNR-repeat neuraminidase GST_C_6 PF17171.4 ORF92859 - 2.8e-05 23.8 0.2 5.2e-05 22.9 0.0 1.5 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF92859 - 7.1e-05 22.9 0.0 9.1e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF92859 - 0.00047 20.1 2.1 0.00056 19.9 0.4 2.0 1 1 1 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF92859 - 0.001 19.3 0.0 0.0015 18.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain DUF354 PF04007.12 ORF92605 - 0.18 10.9 0.0 0.2 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF354) adh_short PF00106.25 ORF9252 - 9e-16 57.9 3.4 2.8e-14 53.1 1.4 2.0 1 1 1 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF9252 - 2e-09 37.3 0.3 5.4e-09 36.0 0.2 1.6 1 1 1 2 2 2 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF9252 - 2.5e-05 24.2 0.2 3.3e-05 23.9 0.2 1.1 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF9252 - 0.019 14.1 0.2 0.021 13.9 0.2 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein LEA_5 PF00477.17 ORF9252 - 0.037 14.5 0.2 0.041 14.3 0.2 1.1 1 0 0 1 1 1 0 Small hydrophilic plant seed protein Epimerase PF01370.21 ORF9252 - 0.042 13.3 0.0 0.046 13.2 0.0 1.0 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Orthoreo_P17 PF07272.11 ORF92006 - 0.097 12.7 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Orthoreovirus P17 protein CCT PF06203.14 ORF9142 - 9.8e-08 31.9 1.4 9.8e-08 31.9 1.4 1.9 2 0 0 2 2 2 1 CCT motif DNA_binding_2 PF13724.6 ORF9142 - 0.017 15.5 0.7 0.03 14.7 0.7 1.4 1 0 0 1 1 1 0 DNA-binding domain OrfA PF17495.2 ORF91284 - 0.076 13.2 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Vpr-like OrfA Med3 PF11593.8 ORF90895 - 0.49 9.5 6.1 0.52 9.4 6.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal PRAI PF00697.22 ORF90797 - 1.8e-20 73.6 0.1 1.9e-20 73.5 0.1 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Dus PF01207.17 ORF90797 - 0.0016 17.6 0.0 0.0018 17.4 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.15 ORF90797 - 0.0033 16.8 1.4 0.004 16.6 1.4 1.1 1 0 0 1 1 1 1 Nitronate monooxygenase TMP-TENI PF02581.17 ORF90797 - 0.0062 15.9 0.1 0.0073 15.7 0.1 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase His_biosynth PF00977.21 ORF90797 - 0.013 14.9 0.1 0.014 14.9 0.1 1.1 1 0 0 1 1 1 0 Histidine biosynthesis protein ThiG PF05690.14 ORF90797 - 0.019 14.3 0.8 0.033 13.5 0.8 1.3 1 1 0 1 1 1 0 Thiazole biosynthesis protein ThiG DUF561 PF04481.12 ORF90797 - 0.088 12.0 0.0 0.089 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Flavi_NS1 PF00948.21 ORF90797 - 0.17 10.8 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 Flavivirus non-structural Protein NS1 MG1 PF17790.1 ORF89542 - 0.011 16.1 0.2 0.014 15.8 0.2 1.2 1 0 0 1 1 1 0 Macroglobulin domain MG1 COX5B PF01215.19 ORF89542 - 0.15 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb DUF2773 PF10971.8 ORF88104 - 0.085 13.0 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2773) Keratin_matx PF04579.12 ORF87865 - 0.023 15.0 4.7 0.03 14.6 4.7 1.3 1 1 0 1 1 1 0 Keratin, high-sulphur matrix protein Toxin_7 PF05980.12 ORF87865 - 2.7 8.3 13.2 1.6 9.0 9.7 2.3 2 1 0 2 2 2 0 Toxin 7 FixQ PF05545.11 ORF87835 - 0.17 11.8 4.2 0.3 11.1 4.2 1.4 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF2475 PF10629.9 ORF87585 - 0.0064 16.7 0.4 0.012 15.8 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2475) DUF5447 PF17525.2 ORF87366 - 0.14 12.6 5.3 0.2 12.1 5.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5447) RNase_H_2 PF13482.6 ORF87225 - 0.06 13.3 0.0 0.062 13.3 0.0 1.2 1 0 0 1 1 1 0 RNase_H superfamily Collagen PF01391.18 ORF86600 - 0.34 10.7 11.1 0.58 10.0 11.1 1.5 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) Keratin_2_head PF16208.5 ORF86600 - 1.2 9.2 17.4 1.4 9.1 17.4 1.1 1 0 0 1 1 1 0 Keratin type II head Sporozoite_P67 PF05642.11 ORF86600 - 1.3 7.0 9.2 1.4 6.9 9.2 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen HTH_51 PF18558.1 ORF86371 - 0.057 13.3 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Sugar_tr PF00083.24 ORF86018 - 0.00018 20.5 0.3 0.00018 20.5 0.3 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter DUF3997 PF13162.6 ORF85917 - 0.26 11.6 0.0 0.37 11.1 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3997) DUF1100 PF06500.11 ORF85470 - 2e-45 155.3 0.0 2.2e-45 155.2 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1100) Metaviral_G PF09595.10 ORF85157 - 0.0039 17.3 8.7 0.0046 17.1 8.7 1.1 1 0 0 1 1 1 1 Metaviral_G glycoprotein TEP1_N PF05386.11 ORF85157 - 0.41 10.3 2.7 11 5.8 0.3 2.5 2 0 0 2 2 2 0 TEP1 N-terminal domain HlyIII PF03006.20 ORF85097 - 1.6e-12 47.7 8.1 1.9e-12 47.4 8.1 1.1 1 0 0 1 1 1 1 Haemolysin-III related DUF406 PF04175.12 ORF85086 - 2.7e-29 101.5 2.7 3.1e-29 101.3 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF406) NAF PF03822.14 ORF85086 - 0.052 13.7 0.3 1 9.6 0.1 2.1 2 0 0 2 2 2 0 NAF domain NOG1_N PF17835.1 ORF83709 - 0.12 12.4 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 NOG1 N-terminal helical domain Herpes_UL25 PF01499.16 ORF81842 - 0.11 10.9 0.0 0.12 10.9 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL25 family RNA_pol_Rpb6 PF01192.22 ORF814 - 6.9e-13 48.3 0.1 1.1e-12 47.7 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb6 AARP2CN PF08142.12 ORF81368 - 0.029 14.5 0.0 0.053 13.6 0.0 1.4 1 0 0 1 1 1 0 AARP2CN (NUC121) domain DUF3817 PF12823.7 ORF81324 - 0.0044 17.8 1.3 0.0053 17.5 1.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3817) YccF PF03733.13 ORF81324 - 0.063 14.0 0.7 0.063 14.0 0.7 1.8 2 0 0 2 2 2 0 Inner membrane component domain MAM33 PF02330.16 ORF81057 - 3e-18 66.6 0.3 3.6e-18 66.3 0.3 1.0 1 0 0 1 1 1 1 Mitochondrial glycoprotein DUF5527 PF17665.1 ORF81006 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) DcuC PF03606.15 ORF80824 - 0.06 11.8 0.0 0.069 11.6 0.0 1.0 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier DUF5527 PF17665.1 ORF80001 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) Stevor PF17410.2 ORF79467 - 0.3 10.6 0.8 0.28 10.7 0.8 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF3367 PF11847.8 ORF79359 - 0.066 11.1 3.3 0.067 11.1 3.3 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase DUF4365 PF14280.6 ORF78389 - 0.053 13.5 0.1 0.055 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4365) Ax_dynein_light PF10211.9 ORF77958 - 7.6e-18 65.1 0.0 9.2e-18 64.9 0.0 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain DUF2464 PF10240.9 ORF77351 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 N_BRCA1_IG PF16158.5 ORF76982 - 0.00028 21.6 0.0 0.00032 21.4 0.0 1.1 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene SR-25 PF10500.9 ORF76316 - 0.018 14.6 18.7 0.019 14.6 18.7 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Herpes_pp85 PF04637.12 ORF76316 - 2 6.7 8.1 2.1 6.6 8.1 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF4614 PF15391.6 ORF76316 - 9 6.3 14.4 11 6.0 14.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) DUF5527 PF17665.1 ORF75778 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) DPM3 PF08285.11 ORF75743 - 0.02 15.0 0.5 0.028 14.6 0.5 1.2 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF3727 PF12527.8 ORF75547 - 0.057 13.6 0.6 0.074 13.3 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3727) DUF5450 PF17529.2 ORF74308 - 0.071 13.2 0.5 0.081 13.1 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5450) AZUL PF16558.5 ORF73581 - 0.89 9.8 3.7 2.3 8.5 0.7 2.1 2 0 0 2 2 2 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A EcoRI_methylase PF13651.6 ORF73370 - 0.014 14.7 0.5 0.016 14.5 0.5 1.2 1 0 0 1 1 1 0 Adenine-specific methyltransferase EcoRI SWIRM-assoc_1 PF16495.5 ORF71821 - 0.27 11.2 8.5 0.45 10.5 8.5 1.3 1 0 0 1 1 1 0 SWIRM-associated region 1 Sel_put PF04328.13 ORF7140 - 0.43 10.6 11.9 0.66 10.1 1.6 2.2 1 1 0 2 2 2 0 Selenoprotein, putative Phe_ZIP PF08916.11 ORF7140 - 0.53 11.0 5.7 6.7 7.5 1.7 2.2 2 0 0 2 2 2 0 Phenylalanine zipper DUF1381 PF07129.11 ORF71125 - 0.067 13.0 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) Coilin_N PF15862.5 ORF71051 - 6.9 6.5 10.4 9.1 6.1 10.4 1.2 1 0 0 1 1 1 0 Coilin N-terminus Spore_coat_CotO PF14153.6 ORF71051 - 7.1 6.5 16.3 8.3 6.3 16.3 1.1 1 0 0 1 1 1 0 Spore coat protein CotO Pkinase PF00069.25 ORF70977 - 6.3e-05 22.5 0.0 7.9e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF4217 PF13959.6 ORF70977 - 0.069 13.4 0.1 0.098 12.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4217) Pkinase_Tyr PF07714.17 ORF70977 - 0.11 11.8 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase DUF5533 PF17685.1 ORF70938 - 0.04 14.3 2.4 0.044 14.2 2.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5533) Herpes_UL25 PF01499.16 ORF7057 - 0.11 10.9 0.0 0.12 10.9 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL25 family DUF1635 PF07795.11 ORF70205 - 0.012 15.5 1.0 0.013 15.4 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) PRAI PF00697.22 ORF70191 - 1.8e-20 73.6 0.1 1.9e-20 73.5 0.1 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Dus PF01207.17 ORF70191 - 0.0016 17.6 0.0 0.0018 17.4 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.15 ORF70191 - 0.0033 16.8 1.4 0.004 16.6 1.4 1.1 1 0 0 1 1 1 1 Nitronate monooxygenase TMP-TENI PF02581.17 ORF70191 - 0.0062 15.9 0.1 0.0073 15.7 0.1 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase His_biosynth PF00977.21 ORF70191 - 0.013 14.9 0.1 0.014 14.9 0.1 1.1 1 0 0 1 1 1 0 Histidine biosynthesis protein ThiG PF05690.14 ORF70191 - 0.019 14.3 0.8 0.033 13.5 0.8 1.3 1 1 0 1 1 1 0 Thiazole biosynthesis protein ThiG DUF561 PF04481.12 ORF70191 - 0.088 12.0 0.0 0.089 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Flavi_NS1 PF00948.21 ORF70191 - 0.17 10.8 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 Flavivirus non-structural Protein NS1 Keratin_assoc PF09775.9 ORF69529 - 0.014 15.0 7.0 0.018 14.7 7.0 1.1 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 MNE1 PF13762.6 ORF69182 - 0.0076 16.2 0.2 0.015 15.3 0.1 1.5 1 1 0 1 1 1 1 Mitochondrial splicing apparatus component UPF0236 PF06782.11 ORF69182 - 0.036 12.7 0.0 0.038 12.6 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0236) TSP_NTD PF17804.1 ORF69182 - 0.048 13.9 0.2 0.062 13.6 0.2 1.1 1 0 0 1 1 1 0 Tail specific protease N-terminal domain AMPKBI PF04739.15 ORF69182 - 0.52 10.6 2.6 1.8 8.9 2.6 1.8 1 1 0 1 1 1 0 5'-AMP-activated protein kinase beta subunit, interaction domain OmpH PF03938.14 ORF68722 - 0.63 10.4 18.2 0.93 9.8 18.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2457 PF10446.9 ORF68722 - 6.6 5.8 17.8 7.5 5.6 17.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) S_2TMBeta PF18153.1 ORF67629 - 0.027 14.3 0.2 0.031 14.1 0.2 1.1 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain cNMP_binding PF00027.29 ORF66581 - 0.0012 18.9 0.0 0.0016 18.4 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MRJP PF03022.16 ORF66581 - 0.042 13.2 0.5 0.049 13.0 0.5 1.0 1 0 0 1 1 1 0 Major royal jelly protein ALG3 PF05208.13 ORF66383 - 1e-11 44.9 2.3 1.1e-11 44.9 2.3 1.0 1 0 0 1 1 1 1 ALG3 protein PRA1 PF03208.19 ORF65366 - 0.17 11.5 9.5 0.35 10.5 9.5 1.6 1 1 0 1 1 1 0 PRA1 family protein PHF12_MRG_bd PF16737.5 ORF65035 - 0.0017 18.0 0.0 0.064 13.0 0.0 2.2 2 0 0 2 2 2 2 PHD finger protein 12 MRG binding domain Herpes_UL25 PF01499.16 ORF65017 - 0.11 10.9 0.0 0.12 10.9 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL25 family Arg_decarb_HB PF17810.1 ORF64820 - 0.092 13.0 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 Arginine decarboxylase helical bundle domain Cyclin_N PF00134.23 ORF6316 - 1.2e-11 44.4 0.2 1.8e-11 43.9 0.2 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Med3 PF11593.8 ORF62826 - 0.49 9.5 6.1 0.52 9.4 6.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal YafO_toxin PF13957.6 ORF62342 - 0.0052 16.8 0.7 0.0072 16.4 0.7 1.3 1 0 0 1 1 1 1 Toxin YafO, type II toxin-antitoxin system ABC_tran PF00005.27 ORF61676 - 7.9e-09 36.1 0.0 9.4e-09 35.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF61676 - 0.0042 16.5 0.1 0.0045 16.4 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF4441 PF14536.6 ORF61616 - 0.044 14.0 4.9 0.09 13.0 4.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) Phage_sheath_1C PF17482.2 ORF61616 - 0.046 13.7 0.0 0.1 12.6 0.0 1.5 1 1 1 2 2 2 0 Phage tail sheath C-terminal domain PPV_E2_C PF00511.17 ORF61616 - 0.062 13.5 0.0 0.08 13.1 0.0 1.3 1 0 0 1 1 1 0 E2 (early) protein, C terminal Vps35 PF03635.17 ORF60761 - 7.6e-14 51.2 0.5 8.8e-14 51.0 0.5 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 FAS_N PF17828.1 ORF60761 - 0.024 14.6 0.1 0.027 14.5 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta DER1 PF04511.15 ORF59703 - 1.7e-05 24.9 2.3 1.9e-05 24.7 2.3 1.0 1 0 0 1 1 1 1 Der1-like family DUF4365 PF14280.6 ORF59235 - 0.053 13.5 0.1 0.055 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4365) NUDIX_4 PF14815.6 ORF59076 - 0.025 14.6 0.3 0.033 14.2 0.3 1.3 1 0 0 1 1 1 0 NUDIX domain NYAP_N PF15439.6 ORF58760 - 0.94 8.6 6.8 0.93 8.6 6.8 1.1 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter MAM33 PF02330.16 ORF58689 - 3e-18 66.6 0.3 3.6e-18 66.3 0.3 1.0 1 0 0 1 1 1 1 Mitochondrial glycoprotein DUF3367 PF11847.8 ORF58371 - 0.066 11.1 3.3 0.067 11.1 3.3 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase zf-CCHC PF00098.23 ORF57420 - 1.3e-09 37.6 1.7 3.3e-09 36.4 1.7 1.8 1 0 0 1 1 1 1 Zinc knuckle zf-CCCH PF00642.24 ORF57420 - 2.8e-06 27.1 3.8 5.8e-06 26.1 3.8 1.6 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF57420 - 2.7e-05 24.1 4.4 5.3e-05 23.1 4.4 1.5 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 ORF57420 - 0.00012 21.8 3.7 0.00021 21.0 3.7 1.5 1 0 0 1 1 1 1 CCCH-type zinc finger Torus PF16131.5 ORF57420 - 0.023 15.4 0.9 0.023 15.4 0.9 1.5 1 1 1 2 2 2 0 Torus domain zf-CCHC_6 PF15288.6 ORF57420 - 0.029 14.2 1.1 0.055 13.3 1.1 1.4 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_4 PF14392.6 ORF57420 - 0.045 13.5 0.6 0.081 12.7 0.6 1.4 1 0 0 1 1 1 0 Zinc knuckle U-box PF04564.15 ORF57108 - 6.2e-09 35.9 0.0 8.8e-09 35.4 0.0 1.3 1 0 0 1 1 1 1 U-box domain T3SS_NleG PF06416.12 ORF57108 - 1.9e-05 24.5 0.1 5.4e-05 23.1 0.1 1.7 1 1 0 1 1 1 1 Effector protein NleG Tristanin_u2 PF16638.5 ORF55372 - 0.0023 18.8 0.0 0.0027 18.6 0.0 1.1 1 0 0 1 1 1 1 Unstructured region on methyltransferase between zinc-fingers DUF45 PF01863.17 ORF55173 - 5.3e-11 43.0 1.0 5.7e-11 42.9 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.10 ORF55173 - 9.5e-06 25.8 0.2 1e-05 25.7 0.2 1.2 1 0 0 1 1 1 1 WLM domain DUF4490 PF14892.6 ORF54700 - 4.8e-05 23.4 0.1 6.3e-05 23.0 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) Podoplanin PF05808.11 ORF54034 - 0.18 11.9 2.2 0.19 11.8 2.2 1.1 1 0 0 1 1 1 0 Podoplanin GRIP PF01465.20 ORF54008 - 0.00046 20.0 0.4 0.00098 19.0 0.4 1.6 1 0 0 1 1 1 1 GRIP domain Dpoe2NT PF12213.8 ORF54008 - 0.027 14.8 3.1 0.13 12.5 0.5 2.4 1 1 1 2 2 2 0 DNA polymerases epsilon N terminal DUF1381 PF07129.11 ORF53867 - 0.067 13.0 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks240.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks240.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks240.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks240.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:57:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DEC-1_N PF04625.13 ORF53717 - 0.031 13.3 0.1 0.035 13.1 0.1 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DUF2938 PF11158.8 ORF53680 - 0.16 11.5 0.1 0.17 11.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2938) Glyco_hydro_59M PF17387.2 ORF53394 - 0.063 13.4 0.0 0.071 13.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 central domain MAT1-1-2 PF17043.5 ORF51741 - 0.058 13.3 0.2 0.091 12.6 0.1 1.3 1 1 0 1 1 1 0 Mating type protein 1-1-2 of unknown function EXS PF03124.14 ORF51665 - 0.015 14.6 0.1 0.015 14.6 0.1 1.1 1 0 0 1 1 1 0 EXS family PP2C_C PF07830.13 ORF51242 - 0.064 13.7 0.5 0.13 12.7 0.1 1.6 2 0 0 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain DUF4743 PF15916.5 ORF51242 - 0.069 13.1 0.1 1.3 9.0 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4743) ACBP PF00887.19 ORF51046 - 2.8e-21 75.5 0.7 3.2e-21 75.3 0.7 1.0 1 0 0 1 1 1 1 Acyl CoA binding protein LsmAD PF06741.13 ORF49602 - 0.21 12.1 4.8 0.53 10.9 5.1 1.5 1 1 1 2 2 2 0 LsmAD domain SURF2 PF05477.11 ORF49389 - 0.41 10.3 14.4 0.45 10.2 14.4 1.0 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) FYDLN_acid PF09538.10 ORF49389 - 3.2 8.5 16.5 5 7.9 16.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) NUDIX_4 PF14815.6 ORF4842 - 0.025 14.6 0.3 0.033 14.2 0.3 1.3 1 0 0 1 1 1 0 NUDIX domain TrmE_N PF10396.9 ORF47679 - 0.16 12.3 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 GTP-binding protein TrmE N-terminus DHHC PF01529.20 ORF4708 - 0.0047 17.0 0.7 0.0078 16.3 0.7 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase DER1 PF04511.15 ORF46461 - 1.7e-05 24.9 2.3 1.9e-05 24.7 2.3 1.0 1 0 0 1 1 1 1 Der1-like family PRA1 PF03208.19 ORF46004 - 0.17 11.5 9.5 0.35 10.5 9.5 1.6 1 1 0 1 1 1 0 PRA1 family protein CEBP_ZZ PF16366.5 ORF45734 - 4e-05 23.8 3.0 5.4e-05 23.4 3.0 1.2 1 0 0 1 1 1 1 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-B_box PF00643.24 ORF45734 - 0.00016 21.8 7.6 0.00023 21.3 7.6 1.2 1 0 0 1 1 1 1 B-box zinc finger zf-C3HC4_3 PF13920.6 ORF45734 - 0.078 12.9 6.3 0.11 12.4 6.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Ion_trans PF00520.31 ORF45616 - 0.0002 20.7 0.6 0.00021 20.6 0.6 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF45616 - 0.068 11.8 1.0 0.08 11.6 1.0 1.1 1 0 0 1 1 1 0 Polycystin cation channel DUF1372 PF07116.11 ORF45616 - 0.11 12.7 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1372) DUF2464 PF10240.9 ORF45588 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 CDV3 PF15359.6 ORF45545 - 0.1 13.1 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 zf-RING_5 PF14634.6 ORF45545 - 0.49 10.4 8.1 1.5 8.9 8.1 1.9 1 1 0 1 1 1 0 zinc-RING finger domain CDC50 PF03381.15 ORF45271 - 1.2e-24 87.3 1.1 1.5e-24 87.0 1.1 1.1 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family OmpH PF03938.14 ORF44740 - 0.63 10.4 18.2 0.93 9.8 18.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2457 PF10446.9 ORF44740 - 6.6 5.8 17.8 7.5 5.6 17.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DoxX PF07681.12 ORF44452 - 3.7 8.2 9.8 9 7.0 9.8 1.6 1 1 0 1 1 1 0 DoxX GerD PF17898.1 ORF42787 - 0.022 14.7 4.1 0.029 14.3 4.1 1.2 1 0 0 1 1 1 0 Spore germination GerD central core domain Penaeidin PF05927.11 ORF4203 - 0.0054 17.4 0.3 0.0072 17.0 0.3 1.2 1 0 0 1 1 1 1 Penaeidin HupE_UreJ PF04955.12 ORF41773 - 0.0098 15.4 0.2 0.012 15.1 0.2 1.3 1 0 0 1 1 1 1 HupE / UreJ protein UBA_e1_thiolCys PF10585.9 ORF40701 - 2.9e-13 50.4 0.0 3.2e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-activating enzyme active site Methyltransf_5 PF01795.19 ORF401 - 4.1e-14 52.8 0.4 4.2e-14 52.8 0.4 1.0 1 0 0 1 1 1 1 MraW methylase family FixQ PF05545.11 ORF40031 - 0.17 11.8 4.2 0.3 11.1 4.2 1.4 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF2244 PF10003.9 ORF39958 - 0.028 14.1 0.0 0.03 14.0 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) DUF1635 PF07795.11 ORF39642 - 0.012 15.5 1.0 0.013 15.4 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) PsbL PF02419.17 ORF39388 - 1 9.4 7.6 2 8.5 7.6 1.5 1 0 0 1 1 1 0 PsbL protein DUF5527 PF17665.1 ORF38946 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) Abhydrolase_1 PF00561.20 ORF38757 - 0.0092 15.6 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold LpxB PF02684.15 ORF38396 - 0.094 11.5 0.9 0.11 11.3 0.9 1.1 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase Sel_put PF04328.13 ORF37452 - 0.51 10.4 18.7 0.4 10.7 5.3 2.5 3 0 0 3 3 3 0 Selenoprotein, putative Cdc6_C PF09079.11 ORF37305 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain Carb_anhydrase PF00194.21 ORF37071 - 0.011 15.3 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic-type carbonic anhydrase Adeno_E3 PF06040.11 ORF37071 - 0.92 9.7 2.9 1 9.6 2.9 1.3 1 1 0 1 1 1 0 Adenovirus E3 protein F_actin_bind PF08919.10 ORF3699 - 0.1 12.7 0.3 0.13 12.4 0.3 1.1 1 0 0 1 1 1 0 F-actin binding DUF922 PF06037.11 ORF3699 - 0.15 11.8 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) Binary_toxB PF03495.14 ORF36459 - 0.095 12.9 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain Tmemb_9 PF05434.11 ORF35009 - 0.007 16.3 2.4 0.0077 16.1 2.4 1.1 1 0 0 1 1 1 1 TMEM9 GTP_cyclohydro2 PF00925.20 ORF35009 - 0.035 13.7 0.1 0.039 13.5 0.1 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase II Mso1_Sec1_bdg PF14475.6 ORF35009 - 1.9 8.1 3.2 64 3.3 0.0 3.1 3 0 0 3 3 3 0 Sec1-binding region of Mso1 Metaviral_G PF09595.10 ORF34600 - 0.0039 17.3 8.7 0.0046 17.1 8.7 1.1 1 0 0 1 1 1 1 Metaviral_G glycoprotein TEP1_N PF05386.11 ORF34600 - 0.41 10.3 2.7 11 5.8 0.3 2.5 2 0 0 2 2 2 0 TEP1 N-terminal domain Sugar_tr PF00083.24 ORF34537 - 0.00014 20.8 3.0 0.00016 20.7 3.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter CD99L2 PF12301.8 ORF34537 - 0.075 13.3 0.1 0.093 13.0 0.1 1.1 1 0 0 1 1 1 0 CD99 antigen like protein 2 ASF1_hist_chap PF04729.13 ORF34398 - 3e-23 82.5 0.1 3.2e-23 82.4 0.1 1.0 1 0 0 1 1 1 1 ASF1 like histone chaperone TPKR_C2 PF16920.5 ORF33866 - 0.064 13.4 0.1 0.21 11.7 0.1 1.8 1 1 0 1 1 1 0 Tyrosine-protein kinase receptor C2 Ig-like domain Metaviral_G PF09595.10 ORF33675 - 0.0039 17.3 8.7 0.0046 17.1 8.7 1.1 1 0 0 1 1 1 1 Metaviral_G glycoprotein TEP1_N PF05386.11 ORF33675 - 0.41 10.3 2.7 11 5.8 0.3 2.5 2 0 0 2 2 2 0 TEP1 N-terminal domain PUF PF00806.19 ORF33557 - 3.9e-07 29.4 0.0 0.0072 16.0 0.0 2.4 2 0 0 2 2 2 2 Pumilio-family RNA binding repeat INTS5_N PF14837.6 ORF33557 - 0.051 13.2 0.0 0.34 10.5 0.1 1.8 1 1 1 2 2 2 0 Integrator complex subunit 5 N-terminus Keratin_matx PF04579.12 ORF33532 - 0.023 15.0 4.7 0.03 14.6 4.7 1.3 1 1 0 1 1 1 0 Keratin, high-sulphur matrix protein Toxin_7 PF05980.12 ORF33532 - 2.7 8.3 13.2 1.6 9.0 9.7 2.3 2 1 0 2 2 2 0 Toxin 7 RRM_1 PF00076.22 ORF33240 - 1.1e-10 41.1 0.1 1.4e-10 40.8 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pox_D3 PF04580.13 ORF33240 - 0.0057 16.3 0.1 0.0064 16.2 0.1 1.2 1 0 0 1 1 1 1 Chordopoxvirinae D3 protein DUF3037 PF11236.8 ORF32338 - 0.098 13.1 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3037) DUF1987 PF09345.10 ORF32125 - 0.2 11.4 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) ABC_tran PF00005.27 ORF31489 - 3.4e-11 43.8 0.1 4.1e-11 43.6 0.1 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF31489 - 0.0033 16.9 0.1 0.0035 16.8 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DDRGK PF09756.9 ORF31489 - 0.024 14.2 0.8 0.028 14.0 0.8 1.1 1 0 0 1 1 1 0 DDRGK domain DUF1908 PF08926.11 ORF31489 - 0.032 13.3 0.2 0.035 13.2 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) YmgB PF10798.8 ORF31425 - 0.019 14.8 0.4 0.24 11.3 0.0 2.2 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR DUF4490 PF14892.6 ORF30789 - 4.8e-05 23.4 0.1 6.3e-05 23.0 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) TraD_N PF12615.8 ORF30778 - 0.063 14.0 0.2 0.073 13.8 0.2 1.1 1 0 0 1 1 1 0 F sex factor protein N terminal Phage_P2_GpU PF06995.11 ORF29607 - 0.078 12.6 0.0 0.091 12.4 0.0 1.1 1 0 0 1 1 1 0 Phage P2 GpU YtxC PF08812.11 ORF29269 - 0.022 14.4 0.1 0.025 14.2 0.1 1.1 1 0 0 1 1 1 0 YtxC-like family DER1 PF04511.15 ORF27496 - 1.7e-05 24.9 2.3 1.9e-05 24.7 2.3 1.0 1 0 0 1 1 1 1 Der1-like family DUF872 PF05915.12 ORF26069 - 0.064 13.4 0.2 0.081 13.1 0.2 1.3 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) cNMP_binding PF00027.29 ORF25668 - 0.0012 18.9 0.0 0.0016 18.4 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MRJP PF03022.16 ORF25668 - 0.042 13.2 0.5 0.049 13.0 0.5 1.0 1 0 0 1 1 1 0 Major royal jelly protein Rdx PF10262.9 ORF23997 - 9.3e-07 29.0 0.0 9.8e-07 28.9 0.0 1.3 1 1 0 1 1 1 1 Rdx family DUF2798 PF11391.8 ORF23997 - 0.026 14.6 3.1 0.037 14.1 3.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2798) HMw1_D2 PF18254.1 ORF23248 - 0.11 12.9 0.7 0.11 12.9 0.7 1.9 1 1 1 2 2 2 0 HMW1 domain 2 DUF4535 PF15054.6 ORF22822 - 0.17 11.6 0.3 0.38 10.5 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) Pkinase PF00069.25 ORF22466 - 7.3e-07 28.8 0.0 7.5e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22466 - 0.001 18.5 0.0 0.001 18.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF22466 - 0.032 13.5 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Kinase-like 2-Hacid_dh_C PF02826.19 ORF2203 - 1.7e-24 86.2 0.0 2.6e-24 85.6 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF2203 - 4.3e-05 23.2 0.0 4.4e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NTPase_I-T PF01931.18 ORF21931 - 1e-05 25.4 0.0 1.7e-05 24.7 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function DUF84 DUF4365 PF14280.6 ORF2141 - 0.053 13.5 0.1 0.055 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4365) Streptin-Immun PF11083.8 ORF21000 - 0.0014 19.0 3.5 0.12 12.7 0.6 2.4 2 1 0 2 2 2 2 Lantibiotic streptin immunity protein RE_Alw26IDE PF09665.10 ORF21000 - 0.025 13.8 2.1 0.028 13.6 2.1 1.0 1 0 0 1 1 1 0 Type II restriction endonuclease (RE_Alw26IDE) TssO PF17561.2 ORF21000 - 0.033 14.3 6.9 0.045 13.9 6.9 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO DUF4521 PF15021.6 ORF21000 - 0.039 13.9 0.4 0.043 13.7 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4521) DUF4200 PF13863.6 ORF21000 - 0.16 12.3 9.5 0.2 12.1 9.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) MtrG PF04210.13 ORF21000 - 0.47 10.3 2.6 11 6.0 0.2 2.3 2 1 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G DUF1682 PF07946.14 ORF2048 - 0.046 12.9 0.7 0.046 12.9 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) YbaB_DNA_bd PF02575.16 ORF20310 - 1.6e-35 121.2 9.2 1.7e-35 121.1 9.2 1.0 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family CARM1 PF11531.8 ORF20310 - 0.12 12.6 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal DUF3947 PF13135.6 ORF20310 - 0.26 11.5 2.0 0.37 11.0 2.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3947) CENP-Q PF13094.6 ORF20310 - 0.27 11.4 4.5 6.9 6.8 0.0 2.1 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit bZIP_2 PF07716.15 ORF20310 - 2.4 8.3 7.6 3.4 7.8 2.6 2.3 2 0 0 2 2 2 0 Basic region leucine zipper PspB PF06667.12 ORF20310 - 2.9 8.0 4.8 19 5.4 0.1 2.2 2 0 0 2 2 2 0 Phage shock protein B NUDIX_4 PF14815.6 ORF20225 - 0.025 14.6 0.3 0.033 14.2 0.3 1.3 1 0 0 1 1 1 0 NUDIX domain Omega-toxin PF06357.11 ORF19788 - 0.17 11.7 5.7 0.083 12.7 3.8 1.5 1 1 0 1 1 1 0 Omega-atracotoxin Stc1 PF12898.7 ORF19102 - 0.00071 20.1 0.4 0.00097 19.6 0.4 1.3 1 0 0 1 1 1 1 Stc1 domain Zn_Tnp_IS1595 PF12760.7 ORF19102 - 0.036 14.0 1.0 0.056 13.4 1.0 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DZR PF12773.7 ORF19102 - 0.053 13.5 1.2 0.09 12.8 1.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-C2H2_3 PF13878.6 ORF19102 - 0.3 11.0 2.0 3.7 7.5 0.0 2.3 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf_CCCH_5 PF18384.1 ORF1821 - 0.041 14.0 0.5 0.099 12.8 0.5 1.7 1 0 0 1 1 1 0 Unkempt Zinc finger domain 1 (Znf1) DUF4756 PF15948.5 ORF18100 - 0.048 13.5 0.1 0.061 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4756) NUDIX_5 PF16705.5 ORF18100 - 0.085 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 NUDIX, or N-terminal NPxY motif-rich, region of KRIT DUF2464 PF10240.9 ORF17611 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 PetM PF08041.11 ORF1729 - 0.35 10.5 4.0 5.5 6.7 0.2 2.3 2 0 0 2 2 2 0 PetM family of cytochrome b6f complex subunit 7 MORN PF02493.20 ORF17056 - 0.0003 20.5 7.5 0.0018 18.0 3.2 3.1 3 0 0 3 3 3 2 MORN repeat UPF0242 PF06785.11 ORF15927 - 0.1 12.7 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5447 PF17525.2 ORF15091 - 0.14 12.6 5.3 0.2 12.1 5.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5447) DUF2464 PF10240.9 ORF14524 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 Formyl_trans_N PF00551.19 ORF14380 - 8.1e-22 77.8 0.0 9.2e-22 77.7 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase QRPTase_C PF01729.19 ORF14180 - 0.00029 20.7 0.0 0.00032 20.5 0.0 1.0 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain Mis12 PF05859.12 ORF14180 - 0.027 14.5 2.9 0.031 14.4 2.5 1.5 2 0 0 2 2 2 0 Mis12 protein SAP25 PF15476.6 ORF13114 - 0.0093 15.7 0.8 0.01 15.5 0.8 1.0 1 0 0 1 1 1 1 Histone deacetylase complex subunit SAP25 Ca_chan_IQ PF08763.11 ORF11463 - 0.14 12.4 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Voltage gated calcium channel IQ domain MAM33 PF02330.16 ORF112092 - 3e-18 66.6 0.3 3.6e-18 66.3 0.3 1.0 1 0 0 1 1 1 1 Mitochondrial glycoprotein OmpH PF03938.14 ORF111964 - 0.63 10.4 18.2 0.93 9.8 18.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2457 PF10446.9 ORF111964 - 6.6 5.8 17.8 7.5 5.6 17.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) TelA PF05816.11 ORF111533 - 0.0023 17.1 1.0 0.0028 16.8 1.0 1.1 1 0 0 1 1 1 1 Toxic anion resistance protein (TelA) CdvA PF18822.1 ORF111533 - 0.0044 16.8 0.4 0.64 9.9 0.1 2.1 2 0 0 2 2 2 2 CdvA-like coiled-coil domain Cep57_MT_bd PF06657.13 ORF111533 - 0.0062 17.0 0.5 0.46 11.0 0.2 2.3 1 1 1 2 2 2 1 Centrosome microtubule-binding domain of Cep57 DUF713 PF05218.14 ORF111533 - 0.029 14.1 2.0 0.035 13.8 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF713) DUF1640 PF07798.11 ORF111533 - 0.03 14.4 0.8 0.043 13.8 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) YkyA PF10368.9 ORF111533 - 0.044 13.5 3.0 1.8 8.2 0.4 2.0 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein Viral_DNA_bp PF00747.17 ORF111201 - 0.24 8.5 1.6 0.23 8.6 1.6 1.0 1 0 0 1 1 1 0 ssDNA binding protein DER1 PF04511.15 ORF111027 - 1.7e-05 24.9 2.3 1.9e-05 24.7 2.3 1.0 1 0 0 1 1 1 1 Der1-like family HTH_Tnp_1 PF01527.20 ORF110971 - 4.5e-09 36.5 3.5 6.2e-09 36.1 3.5 1.2 1 0 0 1 1 1 1 Transposase HTH_23 PF13384.6 ORF110971 - 0.0074 16.1 0.2 0.017 14.9 0.2 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 ORF110971 - 0.016 15.3 0.1 0.033 14.3 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain FAM76 PF16046.5 ORF110971 - 0.027 13.8 1.7 0.03 13.7 1.7 1.1 1 0 0 1 1 1 0 FAM76 protein CCDC-167 PF15188.6 ORF110971 - 0.061 13.7 6.9 0.093 13.1 6.9 1.5 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF4005 PF13178.6 ORF110971 - 0.21 12.3 2.7 0.26 12.0 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4005) YfzA PF14118.6 ORF110604 - 0.056 13.8 1.1 0.073 13.5 1.1 1.2 1 0 0 1 1 1 0 YfzA-like protein DUF3367 PF11847.8 ORF109573 - 0.066 11.1 3.3 0.067 11.1 3.3 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase DUF4834 PF16118.5 ORF108699 - 0.073 14.0 0.8 0.095 13.7 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) MT PF12777.7 ORF10848 - 0.015 14.3 0.0 0.015 14.3 0.0 1.1 1 0 0 1 1 1 0 Microtubule-binding stalk of dynein motor Parvo_NS1 PF01057.17 ORF10848 - 0.17 11.0 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Complex1_30kDa PF00329.19 ORF10839 - 0.064 13.9 0.0 0.08 13.6 0.0 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Peptidase_M1_N PF17900.1 ORF108288 - 9.8e-13 48.7 0.1 1.2e-12 48.4 0.1 1.0 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain DPM3 PF08285.11 ORF107539 - 0.02 15.0 0.5 0.028 14.6 0.5 1.2 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) RNase_T PF00929.24 ORF107500 - 8.8e-14 52.4 0.5 9.9e-14 52.2 0.5 1.0 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 ORF107500 - 0.0046 17.0 0.1 0.0051 16.8 0.1 1.0 1 0 0 1 1 1 1 3' exoribonuclease, RNase T-like Defensin_2 PF01097.18 ORF107373 - 0.1 12.5 1.0 0.1 12.5 1.0 2.7 4 0 0 4 4 4 0 Arthropod defensin GIIM PF08388.11 ORF107341 - 0.077 13.1 0.2 0.23 11.6 0.1 1.8 2 0 0 2 2 2 0 Group II intron, maturase-specific domain DpnII-MboI PF18742.1 ORF107334 - 0.14 11.8 1.2 1.4 8.5 0.2 2.0 1 1 1 2 2 2 0 REase_DpnII-MboI LpxB PF02684.15 ORF107237 - 0.094 11.5 0.9 0.11 11.3 0.9 1.1 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase AChE_tetra PF08674.10 ORF106896 - 0.041 13.6 2.1 0.072 12.8 2.1 1.3 1 0 0 1 1 1 0 Acetylcholinesterase tetramerisation domain DUF5527 PF17665.1 ORF105668 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) DUF872 PF05915.12 ORF105282 - 0.064 13.4 0.2 0.081 13.1 0.2 1.3 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Phe_hydrox_dim PF07976.12 ORF105250 - 0.14 12.2 0.0 0.2 11.7 0.0 1.3 1 1 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain KIAA1430 PF13879.6 ORF1044 - 0.022 15.5 4.6 0.029 15.1 4.6 1.3 1 0 0 1 1 1 0 KIAA1430 homologue RTP1_C1 PF10363.9 ORF1044 - 0.11 12.7 0.0 0.13 12.4 0.0 1.3 1 1 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 FixQ PF05545.11 ORF103584 - 0.17 11.8 4.2 0.3 11.1 4.2 1.4 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF4648 PF15505.6 ORF103373 - 0.029 15.2 2.6 0.031 15.2 1.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4648) DUF872 PF05915.12 ORF102595 - 0.064 13.4 0.2 0.081 13.1 0.2 1.3 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) MatE PF01554.18 ORF102042 - 3.1e-07 30.2 2.2 3.1e-07 30.2 2.2 1.4 2 0 0 2 2 2 1 MatE Herpes_UL24 PF01646.16 ORF101830 - 0.036 14.0 0.0 0.041 13.9 0.0 1.1 1 0 0 1 1 1 0 Herpes virus proteins UL24 and UL76 YsaB PF13983.6 ORF101822 - 4.1e-42 142.3 1.1 4.8e-42 142.1 1.1 1.0 1 0 0 1 1 1 1 YsaB-like lipoprotein DUF2464 PF10240.9 ORF101691 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 Inv-AAD PF18785.1 ORF100949 - 0.13 12.1 0.4 0.34 10.8 0.4 1.6 1 1 0 1 1 1 0 Invertebrate-AID/APOBEC-deaminase DUF5527 PF17665.1 ORF100631 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) Vps35 PF03635.17 ORF100525 - 7.6e-14 51.2 0.5 8.8e-14 51.0 0.5 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 FAS_N PF17828.1 ORF100525 - 0.024 14.6 0.1 0.027 14.5 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta DUF5110 PF17137.4 ORF100107 - 0.0001 22.5 2.3 0.00016 21.9 2.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF5110) DUF3785 PF12653.7 ORF100107 - 0.023 14.8 0.7 0.026 14.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3785) DUF4187 PF13821.6 NODE_57744_length_292_cov_1.400778_g49805_i0forward_frame_1 - 0.39 10.5 2.2 0.37 10.6 1.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4187) DUF3172 PF11371.8 NODE_57742_length_292_cov_1.459144_g49803_i0forward_frame_1 - 0.077 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3172) Sec23_BS PF08033.12 NODE_57736_length_292_cov_1.622568_g49797_i0forward_frame_1 - 1.5e-16 60.9 0.0 2e-16 60.5 0.0 1.1 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain TPR_2 PF07719.17 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 4.9e-09 35.6 0.5 1e-08 34.7 0.0 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 5.3e-08 32.7 0.6 0.0033 17.7 0.2 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 1.3e-07 31.1 0.6 2.6e-07 30.2 0.1 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 3.1e-06 26.8 2.4 0.00032 20.3 0.8 2.3 1 1 1 2 2 2 2 TPR repeat TPR_8 PF13181.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 6.7e-05 22.8 0.7 0.00012 22.0 0.1 1.8 2 0 0 2 2 1 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 7.6e-05 22.9 0.5 9.4e-05 22.6 0.5 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.00018 21.9 0.0 0.00025 21.5 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.00067 20.2 0.0 0.0009 19.8 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.0086 16.8 0.0 0.023 15.5 0.0 1.7 1 1 1 2 2 2 1 Tetratricopeptide repeat NARP1 PF12569.8 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.018 14.0 0.1 0.021 13.7 0.1 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TPR_12 PF13424.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.042 14.1 0.0 0.062 13.6 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.054 14.1 0.0 0.094 13.4 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_20 PF14561.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.062 13.6 0.0 0.063 13.6 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Ribosomal_L10 PF00466.20 NODE_57729_length_292_cov_1.922179_g49790_i0reverse_frame_1 - 0.067 13.3 0.0 0.072 13.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L10 TSC21 PF15217.6 NODE_57727_length_292_cov_1.941634_g49788_i0forward_frame_1 - 0.039 13.9 0.0 0.041 13.8 0.0 1.1 1 0 0 1 1 1 0 TSC21 family CbiQ PF02361.16 NODE_57725_length_292_cov_1.988327_g49786_i0forward_frame_1 - 1.1 8.8 15.0 1.4 8.5 15.0 1.2 1 0 0 1 1 1 0 Cobalt transport protein CoA_binding_3 PF13727.6 NODE_57725_length_292_cov_1.988327_g49786_i0forward_frame_1 - 8 6.4 11.1 9 6.3 11.1 1.1 1 0 0 1 1 1 0 CoA-binding domain WD40 PF00400.32 NODE_57723_length_292_cov_2.066148_g49784_i0reverse_frame_1 - 0.00052 20.8 0.0 0.00084 20.1 0.0 1.3 1 0 0 1 1 1 1 WD domain, G-beta repeat Ge1_WD40 PF16529.5 NODE_57723_length_292_cov_2.066148_g49784_i0reverse_frame_1 - 0.0032 16.5 0.0 0.0033 16.5 0.0 1.1 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Nbas_N PF15492.6 NODE_57723_length_292_cov_2.066148_g49784_i0reverse_frame_1 - 0.024 14.0 0.0 0.025 13.9 0.0 1.2 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal FYVE PF01363.21 NODE_57721_length_292_cov_2.143969_g49782_i0forward_frame_1 - 0.019 15.1 5.5 0.019 15.1 5.5 2.2 1 1 1 2 2 2 0 FYVE zinc finger SHIPPO-rpt PF07004.12 NODE_57715_length_292_cov_2.618677_g49776_i0forward_frame_1 - 0.19 12.7 4.1 7.9 7.6 0.0 2.9 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat CTK3 PF12243.8 NODE_57713_length_292_cov_2.688716_g49774_i0forward_frame_1 - 0.014 15.4 0.2 0.017 15.1 0.2 1.2 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 RSN1_TM PF13967.6 NODE_57709_length_292_cov_2.898833_g49770_i0reverse_frame_1 - 1.2 8.9 13.1 1.4 8.6 13.1 1.0 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport Molydop_binding PF01568.21 NODE_57708_length_292_cov_2.914397_g49769_i0forward_frame_1 - 2.2e-21 76.0 0.0 2.4e-21 75.8 0.0 1.0 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Lamprin PF06403.11 NODE_57695_length_292_cov_5.295720_g49756_i0forward_frame_1 - 1.5 8.7 21.3 1.4 8.8 4.8 2.2 1 1 1 2 2 2 0 Lamprin DUF3675 PF12428.8 NODE_57694_length_292_cov_6.665370_g49755_i0reverse_frame_1 - 0.022 15.3 3.0 0.022 15.3 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) ECSCR PF15820.5 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_1 - 0.056 13.3 0.4 0.056 13.3 0.4 1.7 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator Hanta_G2 PF01561.16 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_1 - 0.39 9.3 1.9 0.51 8.9 1.9 1.1 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 SP_C-Propep PF08999.10 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_1 - 1.9 8.3 7.4 0.19 11.6 1.3 2.0 2 0 0 2 2 2 0 Surfactant protein C, N terminal propeptide LRR19-TM PF15176.6 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_1 - 5 7.2 6.0 0.35 10.9 0.8 1.7 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain Herpes_LMP1 PF05297.11 NODE_57691_length_292_cov_29.085603_g49752_i0forward_frame_1 - 0.88 8.7 4.9 0.85 8.8 4.9 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Aa_trans PF01490.18 NODE_57686_length_292_cov_44.447471_g49747_i0forward_frame_1 - 1.2e-10 40.7 6.4 1.5e-10 40.4 6.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 NODE_57686_length_292_cov_44.447471_g49747_i0forward_frame_1 - 1.9e-06 27.2 4.6 2.4e-06 26.9 4.6 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF2207 PF09972.9 NODE_57686_length_292_cov_44.447471_g49747_i0forward_frame_1 - 0.26 10.0 0.9 0.27 9.9 0.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Peptidase_M99_C PF17129.4 NODE_57682_length_292_cov_50.638132_g49743_i0reverse_frame_1 - 0.034 14.3 1.8 0.045 14.0 1.8 1.1 1 0 0 1 1 1 0 C-terminal domain of metallo-carboxypeptidase DUF4097 PF13349.6 NODE_57682_length_292_cov_50.638132_g49743_i0reverse_frame_1 - 0.067 12.5 0.0 0.098 12.0 0.0 1.2 1 0 0 1 1 1 0 Putative adhesin DUF4081 PF13312.6 NODE_57681_length_292_cov_52.817121_g49742_i0reverse_frame_1 - 0.097 12.9 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4081) SR-25 PF10500.9 NODE_57681_length_292_cov_52.817121_g49742_i0reverse_frame_1 - 0.62 9.6 14.4 0.77 9.3 14.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DNA_pol_A_exo1 PF01612.20 NODE_57678_length_292_cov_56.000000_g49739_i0forward_frame_1 - 0.00087 19.0 0.0 0.001 18.8 0.0 1.1 1 0 0 1 1 1 1 3'-5' exonuclease LSM PF01423.22 NODE_57675_length_292_cov_60.210117_g49736_i0forward_frame_1 - 8.3e-06 25.4 0.0 1.2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 LSM domain DUF192 PF02643.15 NODE_57673_length_292_cov_64.750973_g49734_i0forward_frame_1 - 2.8e-06 27.4 0.0 3.8e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 DUF2158 PF09926.9 NODE_57673_length_292_cov_64.750973_g49734_i0forward_frame_1 - 0.14 11.9 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized small protein (DUF2158) SPT_ssu-like PF11779.8 NODE_57662_length_292_cov_78.385214_g49723_i0forward_frame_1 - 0.06 13.0 4.0 0.1 12.3 4.0 1.3 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like RACo_linker PF17650.1 NODE_57656_length_292_cov_97.042802_g49717_i0forward_frame_1 - 0.007 16.2 0.0 0.0097 15.7 0.0 1.2 1 0 0 1 1 1 1 RACo linker region Coat_X PF07552.11 NODE_57648_length_292_cov_130.299611_g49709_i0forward_frame_1 - 0.085 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Spore Coat Protein X and V domain SID-1_RNA_chan PF13965.6 NODE_57642_length_292_cov_177.466926_g49703_i0forward_frame_1 - 0.4 9.0 4.3 0.47 8.8 4.3 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Peptidase_M9 PF01752.17 NODE_57633_length_293_cov_0.992248_g49694_i0forward_frame_1 - 0.0039 16.5 0.5 0.0049 16.2 0.5 1.1 1 0 0 1 1 1 1 Collagenase ASC PF00858.24 NODE_57633_length_293_cov_0.992248_g49694_i0forward_frame_1 - 0.043 12.8 0.1 0.054 12.5 0.1 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel Methyltransf_5 PF01795.19 NODE_57624_length_293_cov_1.476744_g49685_i0forward_frame_1 - 3.3e-17 63.0 0.5 3.6e-17 62.8 0.5 1.0 1 0 0 1 1 1 1 MraW methylase family PCYCGC PF13798.6 NODE_57622_length_293_cov_1.608527_g49683_i0forward_frame_1 - 0.06 13.2 0.0 0.066 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function with PCYCGC motif DUF4860 PF16152.5 NODE_57621_length_293_cov_1.620155_g49682_i0forward_frame_1 - 0.039 13.8 0.4 0.055 13.3 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4860) FAST_2 PF08368.12 NODE_57617_length_293_cov_1.794574_g49678_i0reverse_frame_1 - 0.53 11.1 3.0 0.51 11.2 1.3 1.7 1 1 1 2 2 2 0 FAST kinase-like protein, subdomain 2 Fib_alpha PF08702.10 NODE_57615_length_293_cov_1.837209_g49676_i0reverse_frame_1 - 0.0093 16.2 0.2 0.011 16.0 0.2 1.1 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family cNMP_binding PF00027.29 NODE_57605_length_293_cov_2.112403_g49666_i0forward_frame_1 - 0.063 13.4 0.0 0.086 12.9 0.0 1.2 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Claudin_2 PF13903.6 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.0078 16.0 2.6 0.0086 15.9 2.6 1.1 1 0 0 1 1 1 1 PMP-22/EMP/MP20/Claudin tight junction DUF1700 PF08006.11 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.033 13.7 7.1 0.033 13.7 7.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) TMEM154 PF15102.6 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.033 14.1 3.4 0.042 13.7 3.4 1.3 1 0 0 1 1 1 0 TMEM154 protein family Stevor PF17410.2 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.1 12.1 2.8 0.12 11.9 2.8 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF3404 PF11884.8 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.36 10.0 0.6 0.4 9.9 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) DUF2207 PF09972.9 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 1.1 8.0 2.7 1.1 7.9 2.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Amnionless PF14828.6 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 1.1 8.0 3.2 1.2 7.9 3.2 1.1 1 0 0 1 1 1 0 Amnionless Shisa PF13908.6 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 1.8 8.8 5.6 2.4 8.4 5.6 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator EIID-AGA PF03613.14 NODE_57596_length_293_cov_2.248062_g49657_i0reverse_frame_1 - 7.4e-33 113.9 0.0 8.2e-33 113.7 0.0 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component DUF4049 PF13258.6 NODE_57590_length_293_cov_2.465116_g49651_i0forward_frame_1 - 1.9e-52 178.4 0.0 2e-52 178.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4049) FimH_man-bind PF09160.10 NODE_57589_length_293_cov_2.468992_g49650_i0reverse_frame_1 - 4.5e-46 156.1 0.1 4.9e-46 156.0 0.1 1.0 1 0 0 1 1 1 1 FimH, mannose binding Bacillus_HBL PF05791.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.022 14.6 2.9 0.029 14.2 2.9 1.2 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) DUF4407 PF14362.6 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.025 14.0 8.0 0.025 13.9 8.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TACC_C PF05010.14 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.025 14.4 8.8 0.044 13.6 8.8 1.5 1 1 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Atg14 PF10186.9 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.036 13.2 3.2 0.038 13.1 3.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DASH_Dam1 PF08653.10 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.039 13.7 0.7 8.3 6.3 0.1 2.5 2 1 0 2 2 2 0 DASH complex subunit Dam1 Val_tRNA-synt_C PF10458.9 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.049 13.9 7.7 1.1 9.5 2.7 2.4 2 0 0 2 2 2 0 Valyl tRNA synthetase tRNA binding arm DUF4618 PF15397.6 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.052 13.0 6.8 0.069 12.6 6.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) OmpH PF03938.14 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.053 13.9 11.1 0.067 13.5 11.1 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Lebercilin PF15619.6 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.058 13.1 7.0 0.085 12.5 7.0 1.3 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease GvpL_GvpF PF06386.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.11 12.5 4.9 0.12 12.3 4.9 1.1 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF AcylCoA_dehyd_C PF12186.8 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.15 12.2 3.4 2.1 8.5 0.3 2.1 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase C terminal Fib_alpha PF08702.10 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.19 11.9 2.5 2.9 8.1 0.2 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.28 10.0 8.7 0.35 9.7 8.7 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Trimer_CC PF08954.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.29 10.7 3.7 0.12 11.9 1.3 1.6 2 0 0 2 2 2 0 Trimerisation motif HIP1_clath_bdg PF16515.5 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.33 11.6 10.2 0.77 10.4 0.5 2.0 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CCDC74_C PF14917.6 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.45 11.0 3.8 0.43 11.1 0.4 1.9 2 0 0 2 2 2 0 Coiled coil protein 74, C terminal DUF1690 PF07956.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 1 9.8 9.1 1.7 9.1 9.1 1.4 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) FlaC_arch PF05377.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 1.4 9.4 8.0 2.9 8.3 1.2 2.6 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DivIC PF04977.15 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 1.5 8.6 10.6 8.1 6.3 4.6 2.2 2 0 0 2 2 2 0 Septum formation initiator TMPIT PF07851.13 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 3.8 6.7 4.9 4.2 6.5 4.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF2672 PF10878.8 NODE_57575_length_293_cov_2.945736_g49636_i0reverse_frame_1 - 0.015 15.2 0.1 0.023 14.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2672) Sterol_MT_C PF08498.10 NODE_57568_length_293_cov_3.875969_g49629_i0reverse_frame_1 - 0.11 12.8 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Sterol methyltransferase C-terminal Ribosomal_L36 PF00444.18 NODE_57566_length_293_cov_3.906977_g49627_i0forward_frame_1 - 2.1e-14 53.4 2.3 4.1e-14 52.5 2.3 1.5 1 0 0 1 1 1 1 Ribosomal protein L36 Vma12 PF11712.8 NODE_57565_length_293_cov_3.906977_g49626_i0reverse_frame_1 - 0.1 12.7 0.2 0.12 12.4 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Mqo PF06039.15 NODE_57560_length_293_cov_26.166667_g49621_i0reverse_frame_1 - 0.039 12.5 0.0 0.04 12.5 0.0 1.1 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) EF-hand_4 PF12763.7 NODE_57560_length_293_cov_26.166667_g49621_i0reverse_frame_1 - 0.05 13.6 0.2 0.096 12.7 0.2 1.6 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand GON PF08685.11 NODE_57559_length_293_cov_28.658915_g49620_i0reverse_frame_1 - 0.019 14.8 0.3 0.021 14.7 0.3 1.3 1 1 0 1 1 1 0 GON domain TssO PF17561.2 NODE_57547_length_293_cov_56.631783_g49608_i0forward_frame_1 - 0.011 15.9 3.0 0.013 15.6 3.0 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssO Nucleoside_tran PF01733.18 NODE_57547_length_293_cov_56.631783_g49608_i0forward_frame_1 - 0.057 12.8 0.1 0.059 12.7 0.1 1.0 1 0 0 1 1 1 0 Nucleoside transporter Ycf70 PF17382.2 NODE_57547_length_293_cov_56.631783_g49608_i0forward_frame_1 - 0.071 13.5 0.9 0.37 11.2 0.4 1.9 1 1 1 2 2 2 0 Uncharacterized Ycf70-like Oxidored-like PF09791.9 NODE_57546_length_293_cov_59.848837_g49607_i0forward_frame_1 - 0.12 12.0 5.6 0.2 11.3 5.6 1.3 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal DUF5583 PF17821.1 NODE_57545_length_293_cov_60.426357_g49606_i0reverse_frame_1 - 0.19 11.7 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5583) TEX13 PF15186.6 NODE_57537_length_293_cov_81.096899_g49598_i0reverse_frame_1 - 0.14 11.9 0.0 0.23 11.1 0.0 1.4 1 1 0 1 1 1 0 Testis-expressed sequence 13 protein family DUF627 PF04781.12 NODE_57536_length_293_cov_83.519380_g49597_i0reverse_frame_1 - 0.12 12.4 0.1 0.2 11.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF627) YcgR_2 PF12945.7 NODE_57534_length_293_cov_87.248062_g49595_i0reverse_frame_1 - 0.066 13.4 0.2 0.08 13.1 0.2 1.1 1 0 0 1 1 1 0 Flagellar protein YcgR FNIP PF05725.12 NODE_57533_length_293_cov_98.286822_g49594_i0reverse_frame_1 - 1.2e-13 51.0 4.3 1.2e-10 41.4 0.8 2.1 1 1 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_57533_length_293_cov_98.286822_g49594_i0reverse_frame_1 - 0.098 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) DUF1476 PF07345.11 NODE_57533_length_293_cov_98.286822_g49594_i0forward_frame_1 - 0.12 12.7 0.5 17 5.8 0.0 2.7 1 1 2 3 3 3 0 ATPase inhibitor subunit zeta WBP-1 PF11669.8 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_1 - 0.054 14.1 0.1 0.066 13.9 0.1 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 TssO PF17561.2 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_1 - 0.073 13.2 5.7 0.064 13.4 3.2 1.8 1 1 1 2 2 2 0 Type VI secretion system, TssO ResB PF05140.14 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_1 - 0.088 11.5 0.2 0.092 11.5 0.2 1.0 1 0 0 1 1 1 0 ResB-like family CBP4 PF07960.11 NODE_57521_length_293_cov_211.550388_g49582_i0reverse_frame_1 - 0.059 13.2 2.0 0.08 12.8 2.0 1.2 1 1 0 1 1 1 0 CBP4 Nodulin_late PF07127.11 NODE_57515_length_293_cov_617.062016_g49576_i0forward_frame_1 - 0.018 15.3 0.1 0.028 14.7 0.1 1.3 1 0 0 1 1 1 0 Late nodulin protein Fungus-induced PF10917.8 NODE_57515_length_293_cov_617.062016_g49576_i0forward_frame_1 - 0.2 12.0 0.0 0.33 11.3 0.0 1.2 1 0 0 1 1 1 0 Fungus-induced protein S10_plectin PF03501.15 NODE_57511_length_294_cov_1.131274_g49572_i0reverse_frame_1 - 0.045 13.8 0.0 0.056 13.5 0.0 1.2 1 0 0 1 1 1 0 Plectin/S10 domain Rrf2 PF02082.20 NODE_57509_length_294_cov_1.274131_g49570_i0forward_frame_1 - 0.00011 22.5 0.0 0.00015 22.1 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HHH_7 PF14635.6 NODE_57509_length_294_cov_1.274131_g49570_i0forward_frame_1 - 0.074 13.4 0.1 0.094 13.1 0.1 1.2 1 0 0 1 1 1 0 Helix-hairpin-helix motif HTH_IclR PF09339.10 NODE_57509_length_294_cov_1.274131_g49570_i0forward_frame_1 - 0.1 12.4 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Axin_b-cat_bind PF08833.10 NODE_57502_length_294_cov_1.389961_g49563_i0reverse_frame_1 - 0.071 13.2 1.5 0.12 12.5 1.5 1.4 1 0 0 1 1 1 0 Axin beta-catenin binding domain YpzG PF14139.6 NODE_57498_length_294_cov_1.451737_g49559_i0forward_frame_1 - 0.075 13.2 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 YpzG-like protein Spermine_synth PF01564.17 NODE_57493_length_294_cov_1.501931_g49554_i0reverse_frame_1 - 0.075 12.4 0.5 0.21 11.0 0.2 1.7 1 1 1 2 2 2 0 Spermine/spermidine synthase domain MORN PF02493.20 NODE_57492_length_294_cov_1.517375_g49553_i0reverse_frame_1 - 0.0018 18.0 13.8 0.081 12.8 2.5 3.4 3 0 0 3 3 3 3 MORN repeat Sec62 PF03839.16 NODE_57471_length_294_cov_2.135135_g49532_i0forward_frame_1 - 0.037 13.6 1.1 0.048 13.2 1.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 IspA PF04279.15 NODE_57462_length_294_cov_2.189189_g49523_i0forward_frame_1 - 7e-41 140.3 9.3 7.6e-41 140.2 9.3 1.0 1 0 0 1 1 1 1 Intracellular septation protein A DUF4181 PF13789.6 NODE_57461_length_294_cov_2.212355_g49522_i0reverse_frame_1 - 0.049 13.9 4.2 0.06 13.6 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) DUF4834 PF16118.5 NODE_57461_length_294_cov_2.212355_g49522_i0forward_frame_1 - 0.078 13.9 0.6 0.11 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Acyltransferase PF01553.21 NODE_57452_length_294_cov_2.702703_g49513_i0reverse_frame_1 - 0.016 14.8 0.3 0.042 13.5 0.2 1.7 1 1 1 2 2 2 0 Acyltransferase GDE_C PF06202.14 NODE_57439_length_294_cov_26.737452_g49500_i0reverse_frame_1 - 0.012 14.5 0.1 0.016 14.1 0.1 1.2 1 0 0 1 1 1 0 Amylo-alpha-1,6-glucosidase Orbi_NS3 PF01616.16 NODE_57432_length_294_cov_53.949807_g49493_i0reverse_frame_1 - 0.14 11.8 0.1 0.17 11.5 0.1 1.1 1 0 0 1 1 1 0 Orbivirus NS3 PRA-CH PF01502.18 NODE_57430_length_294_cov_54.212355_g49491_i0reverse_frame_1 - 2.6 7.9 6.3 5.4 6.9 0.8 2.1 1 1 1 2 2 2 0 Phosphoribosyl-AMP cyclohydrolase PPR PF01535.20 NODE_57429_length_294_cov_54.961390_g49490_i0reverse_frame_1 - 0.00027 21.0 0.0 0.0021 18.2 0.0 2.0 2 0 0 2 2 2 1 PPR repeat PPR_2 PF13041.6 NODE_57429_length_294_cov_54.961390_g49490_i0reverse_frame_1 - 0.015 15.5 0.0 0.038 14.2 0.0 1.6 1 1 1 2 2 2 0 PPR repeat family Popeye PF04831.13 NODE_57424_length_294_cov_60.749035_g49485_i0forward_frame_1 - 2.1 8.5 8.7 2.3 8.4 8.7 1.1 1 0 0 1 1 1 0 Popeye protein conserved region eIF-3_zeta PF05091.12 NODE_57422_length_294_cov_63.185328_g49483_i0reverse_frame_1 - 0.38 9.7 3.4 0.38 9.7 3.4 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Med4 PF10018.9 NODE_57418_length_294_cov_72.092664_g49479_i0reverse_frame_1 - 0.034 13.8 1.1 0.04 13.6 1.1 1.0 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF2536 PF10750.9 NODE_57418_length_294_cov_72.092664_g49479_i0reverse_frame_1 - 0.035 14.0 0.5 0.058 13.3 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2536) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks241.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks241.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks241.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks241.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Melibiase PF02065.18 NODE_57402_length_294_cov_130.795367_g49463_i0reverse_frame_1 - 0.062 12.2 0.0 0.07 12.1 0.0 1.0 1 0 0 1 1 1 0 Melibiase zinc_ribbon_2 PF13240.6 NODE_57401_length_294_cov_163.861004_g49462_i0forward_frame_1 - 0.025 14.3 0.6 0.049 13.4 0.6 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Nkap_C PF06047.11 NODE_57401_length_294_cov_163.861004_g49462_i0forward_frame_1 - 0.077 13.1 0.0 0.12 12.5 0.0 1.4 1 1 0 1 1 1 0 NF-kappa-B-activating protein C-terminal domain Pox_E10 PF04805.12 NODE_57394_length_294_cov_1286.069498_g49455_i0forward_frame_1 - 1.6 8.7 4.6 2.9 7.8 4.6 1.5 1 0 0 1 1 1 0 E10-like protein conserved region DUF2208 PF09973.9 NODE_57393_length_294_cov_1290.667954_g49454_i0reverse_frame_1 - 0.0066 16.1 1.2 0.0078 15.9 1.2 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) Bax1-I PF01027.20 NODE_57393_length_294_cov_1290.667954_g49454_i0reverse_frame_1 - 0.0068 16.3 0.1 0.0081 16.0 0.1 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 SIT PF15330.6 NODE_57393_length_294_cov_1290.667954_g49454_i0reverse_frame_1 - 0.067 13.6 1.2 4.8 7.6 0.0 2.0 1 1 1 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT COX6C PF02937.15 NODE_57393_length_294_cov_1290.667954_g49454_i0reverse_frame_1 - 0.12 12.5 1.0 8.2 6.6 0.0 2.1 1 1 1 2 2 2 0 Cytochrome c oxidase subunit VIc Orf78 PF06024.12 NODE_57393_length_294_cov_1290.667954_g49454_i0reverse_frame_1 - 8.9 6.7 8.8 2e+02 2.3 8.8 2.1 1 1 0 1 1 1 0 Orf78 (ac78) GlpM PF06942.12 NODE_57393_length_294_cov_1290.667954_g49454_i0forward_frame_1 - 0.053 14.0 1.9 0.062 13.7 1.9 1.2 1 0 0 1 1 1 0 GlpM protein Cytochrom_B559 PF00283.19 NODE_57391_length_294_cov_2661.181467_g49452_i0forward_frame_1 - 2.1e-14 52.6 5.4 3e-14 52.1 5.4 1.3 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits AAA_7 PF12775.7 NODE_57383_length_295_cov_1.365385_g49444_i0forward_frame_3 - 0.02 14.4 0.1 0.025 14.1 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region TPR_12 PF13424.6 NODE_57383_length_295_cov_1.365385_g49444_i0forward_frame_2 - 0.0002 21.5 0.5 0.077 13.3 0.1 1.8 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_57383_length_295_cov_1.365385_g49444_i0forward_frame_2 - 0.036 14.3 1.2 0.25 11.6 0.9 2.4 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_57383_length_295_cov_1.365385_g49444_i0forward_frame_2 - 0.12 12.6 0.4 0.27 11.4 0.3 1.7 1 1 0 1 1 1 0 Tetratricopeptide repeat Pkinase PF00069.25 NODE_57382_length_295_cov_1.380769_g49443_i0reverse_frame_3 - 1.1e-10 41.3 0.0 1.4e-10 41.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57382_length_295_cov_1.380769_g49443_i0reverse_frame_3 - 1.3e-08 34.4 0.0 1.6e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_57382_length_295_cov_1.380769_g49443_i0reverse_frame_3 - 0.0017 17.7 0.0 0.0022 17.4 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Lamprin PF06403.11 NODE_57379_length_295_cov_1.450000_g49440_i0forward_frame_2 - 8.8 6.3 10.4 1.3 9.0 6.1 1.9 1 1 1 2 2 2 0 Lamprin ABC_tran PF00005.27 NODE_57378_length_295_cov_1.457692_g49439_i0reverse_frame_3 - 0.00015 22.3 0.0 0.00017 22.1 0.0 1.0 1 0 0 1 1 1 1 ABC transporter CIMR PF00878.18 NODE_57377_length_295_cov_1.492308_g49438_i0forward_frame_2 - 0.079 13.0 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Cation-independent mannose-6-phosphate receptor repeat DUF4055 PF13264.6 NODE_57375_length_295_cov_1.561538_g49436_i0forward_frame_2 - 0.16 12.1 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4055) PHM7_cyt PF14703.6 NODE_57373_length_295_cov_1.642308_g49434_i0reverse_frame_2 - 0.023 14.9 1.8 0.026 14.8 1.8 1.0 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter RNA_pol_Rpb1_R PF05001.13 NODE_57370_length_295_cov_1.726923_g49431_i0reverse_frame_2 - 1.1 9.8 3.9 6.4 7.3 0.2 2.5 3 0 0 3 3 3 0 RNA polymerase Rpb1 C-terminal repeat Ribosomal_L30 PF00327.20 NODE_57370_length_295_cov_1.726923_g49431_i0reverse_frame_2 - 5 7.1 6.4 5.9 6.9 0.7 2.2 1 1 1 2 2 2 0 Ribosomal protein L30p/L7e NDUF_B6 PF09782.9 NODE_57368_length_295_cov_1.738462_g49429_i0forward_frame_2 - 0.34 11.0 1.2 0.39 10.8 1.2 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit MMTV_SAg PF01054.17 NODE_57366_length_295_cov_1.846154_g49427_i0reverse_frame_3 - 0.081 12.5 1.9 0.094 12.3 0.3 1.7 1 1 1 2 2 2 0 Mouse mammary tumour virus superantigen DUF4937 PF16291.5 NODE_57363_length_295_cov_1.892308_g49424_i0reverse_frame_2 - 0.081 13.2 0.1 0.19 12.0 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4937 WD40 PF00400.32 NODE_57363_length_295_cov_1.892308_g49424_i0forward_frame_2 - 5.1e-05 23.9 0.1 0.27 12.2 0.0 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF5504 PF17608.2 NODE_57363_length_295_cov_1.892308_g49424_i0forward_frame_2 - 0.0099 16.0 0.7 0.082 13.0 0.7 2.0 1 1 0 1 1 1 1 Family of unknown function (DUF5504) TMEM154 PF15102.6 NODE_57362_length_295_cov_1.942308_g49423_i0reverse_frame_3 - 0.0056 16.6 0.9 0.0071 16.3 0.9 1.1 1 0 0 1 1 1 1 TMEM154 protein family Renin_r PF07850.14 NODE_57362_length_295_cov_1.942308_g49423_i0reverse_frame_3 - 0.046 14.3 0.3 0.052 14.2 0.3 1.2 1 0 0 1 1 1 0 Renin receptor-like protein Chromadorea_ALT PF05535.12 NODE_57361_length_295_cov_2.034615_g49422_i0reverse_frame_2 - 0.023 14.9 0.3 0.034 14.3 0.3 1.3 1 0 0 1 1 1 0 Chromadorea ALT protein DUF5463 PF17551.2 NODE_57361_length_295_cov_2.034615_g49422_i0reverse_frame_2 - 0.038 13.9 0.4 0.093 12.6 0.4 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5463) AAA_25 PF13481.6 NODE_57357_length_295_cov_2.115385_g49418_i0reverse_frame_3 - 0.096 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF4619 PF15398.6 NODE_57357_length_295_cov_2.115385_g49418_i0forward_frame_3 - 0.071 12.6 0.2 0.08 12.4 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4619) zf-NF-X1 PF01422.17 NODE_57357_length_295_cov_2.115385_g49418_i0forward_frame_2 - 0.087 12.9 1.0 0.14 12.2 1.0 1.3 1 0 0 1 1 1 0 NF-X1 type zinc finger DnaJ PF00226.31 NODE_57352_length_295_cov_2.180769_g49413_i0reverse_frame_2 - 6.3e-14 51.9 0.0 8.3e-14 51.5 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain Nodulin_late PF07127.11 NODE_57351_length_295_cov_2.269231_g49412_i0reverse_frame_2 - 0.24 11.8 0.3 0.24 11.8 0.3 2.1 2 1 1 3 3 3 0 Late nodulin protein DUF1430 PF07242.11 NODE_57349_length_295_cov_2.415385_g49410_i0reverse_frame_3 - 0.075 13.3 1.9 0.1 12.8 1.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) DUF3624 PF12292.8 NODE_57347_length_295_cov_2.550000_g49408_i0reverse_frame_3 - 0.11 12.9 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3624) RcnB PF11776.8 NODE_57346_length_295_cov_2.557692_g49407_i0reverse_frame_2 - 0.066 13.3 0.1 12 6.0 0.0 2.4 2 0 0 2 2 2 0 Nickel/cobalt transporter regulator HUN PF08729.10 NODE_57346_length_295_cov_2.557692_g49407_i0reverse_frame_2 - 3.2 7.8 9.0 16 5.6 0.0 2.5 2 1 0 2 2 2 0 HPC2 and ubinuclein domain LPD3 PF18798.1 NODE_57344_length_295_cov_2.623077_g49405_i0reverse_frame_3 - 0.075 13.3 3.9 0.11 12.7 3.9 1.4 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 3 DUF1298 PF06974.13 NODE_57343_length_295_cov_2.653846_g49404_i0forward_frame_2 - 2.9e-05 24.1 0.0 3.6e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Pertussis_S2S3 PF02918.15 NODE_57340_length_295_cov_2.753846_g49401_i0forward_frame_3 - 0.14 12.1 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain XRN_M PF17846.1 NODE_57339_length_295_cov_2.800000_g49400_i0forward_frame_3 - 6.6e-39 134.1 2.3 7.7e-39 133.9 2.3 1.0 1 0 0 1 1 1 1 Xrn1 helical domain DUF443 PF04276.12 NODE_57338_length_295_cov_2.838462_g49399_i0forward_frame_3 - 0.55 10.0 7.0 0.66 9.7 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF443) PilJ PF13675.6 NODE_57337_length_295_cov_2.857692_g49398_i0forward_frame_2 - 1.9e-15 56.9 0.3 2.6e-15 56.5 0.3 1.1 1 0 0 1 1 1 1 Type IV pili methyl-accepting chemotaxis transducer N-term LRRNT PF01462.18 NODE_57336_length_295_cov_2.957692_g49397_i0reverse_frame_3 - 0.04 13.6 0.1 0.097 12.4 0.1 1.6 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain DUF1196 PF06709.11 NODE_57334_length_295_cov_3.053846_g49395_i0forward_frame_2 - 0.27 11.4 2.0 0.49 10.6 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1196) CC PF04942.14 NODE_57334_length_295_cov_3.053846_g49395_i0forward_frame_2 - 0.82 9.9 3.9 3.4 8.0 0.1 2.8 3 0 0 3 3 3 0 CC domain Pkinase PF00069.25 NODE_57330_length_295_cov_3.450000_g49391_i0forward_frame_3 - 1.3e-14 54.2 0.0 1.5e-14 54.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57330_length_295_cov_3.450000_g49391_i0forward_frame_3 - 9.9e-08 31.6 0.0 1.2e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PCSK9_C1 PF18459.1 NODE_57327_length_295_cov_7.126923_g49388_i0forward_frame_2 - 0.014 15.5 0.1 0.019 15.1 0.1 1.2 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain VAR1 PF05316.12 NODE_57325_length_295_cov_25.292308_g49386_i0forward_frame_3 - 0.092 11.8 3.8 0.094 11.7 3.8 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein (VAR1) DUF4788 PF16032.5 NODE_57324_length_295_cov_30.034615_g49385_i0forward_frame_2 - 0.015 14.3 0.0 0.017 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4788) FBA_1 PF07734.13 NODE_57321_length_295_cov_42.050000_g49382_i0reverse_frame_3 - 0.047 13.6 0.3 0.051 13.5 0.3 1.1 1 0 0 1 1 1 0 F-box associated TRAPPC9-Trs120 PF08626.11 NODE_57321_length_295_cov_42.050000_g49382_i0reverse_frame_2 - 0.0092 13.4 0.6 0.0098 13.3 0.6 1.0 1 0 0 1 1 1 1 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit Biliv-reduc_cat PF09166.10 NODE_57321_length_295_cov_42.050000_g49382_i0forward_frame_2 - 0.77 10.1 2.6 3 8.2 0.4 2.0 1 1 1 2 2 2 0 Biliverdin reductase, catalytic VP4_helical PF17478.2 NODE_57319_length_295_cov_48.430769_g49380_i0reverse_frame_2 - 2.2 7.6 6.1 2.7 7.3 6.1 1.0 1 0 0 1 1 1 0 Rotavirus VP4 helical domain DUF4715 PF15835.5 NODE_57319_length_295_cov_48.430769_g49380_i0forward_frame_2 - 0.34 11.0 12.5 0.38 10.8 7.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4715) DUF1690 PF07956.11 NODE_57319_length_295_cov_48.430769_g49380_i0forward_frame_2 - 1.4 9.3 12.6 2.1 8.8 12.6 1.3 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF4253 PF14062.6 NODE_57318_length_295_cov_51.076923_g49379_i0reverse_frame_2 - 0.14 12.3 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) Pkinase PF00069.25 NODE_57316_length_295_cov_55.180769_g49377_i0reverse_frame_3 - 0.0013 18.2 0.0 0.0016 17.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pro_CA PF00484.19 NODE_57312_length_295_cov_57.565385_g49373_i0reverse_frame_3 - 4.3e-06 27.1 0.1 6.8e-06 26.5 0.1 1.3 1 0 0 1 1 1 1 Carbonic anhydrase Dicty_CAD PF05720.12 NODE_57312_length_295_cov_57.565385_g49373_i0reverse_frame_3 - 0.085 12.9 0.0 0.19 11.7 0.0 1.5 1 1 0 1 1 1 0 Cell-cell adhesion domain Cyt-b5 PF00173.28 NODE_57308_length_295_cov_62.488462_g49369_i0reverse_frame_3 - 6.1e-05 23.1 0.0 9.2e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain TMEM51 PF15345.6 NODE_57306_length_295_cov_67.807692_g49367_i0forward_frame_3 - 0.21 11.4 3.1 0.26 11.1 3.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 RBP_receptor PF14752.6 NODE_57305_length_295_cov_68.123077_g49366_i0reverse_frame_2 - 0.24 10.0 0.2 0.29 9.7 0.2 1.1 1 0 0 1 1 1 0 Retinol binding protein receptor zf-C2H2_2 PF12756.7 NODE_57303_length_295_cov_74.942308_g49364_i0forward_frame_3 - 0.11 12.8 0.2 0.15 12.4 0.2 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) RCC1_2 PF13540.6 NODE_57299_length_295_cov_77.438462_g49360_i0forward_frame_2 - 2.9e-05 23.7 1.8 0.12 12.2 0.0 2.8 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_57299_length_295_cov_77.438462_g49360_i0forward_frame_2 - 0.062 13.4 0.2 3.6 7.7 0.0 2.1 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 DpnD-PcfM PF14207.6 NODE_57299_length_295_cov_77.438462_g49360_i0forward_frame_2 - 0.21 11.5 0.3 12 5.9 0.1 2.1 2 0 0 2 2 2 0 DpnD/PcfM-like protein PheRS_DBD2 PF18554.1 NODE_57299_length_295_cov_77.438462_g49360_i0forward_frame_2 - 0.3 11.1 6.7 5 7.2 0.7 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Nuc_H_symport PF03825.16 NODE_57297_length_295_cov_82.561538_g49358_i0forward_frame_2 - 0.05 12.6 3.8 0.053 12.5 3.8 1.0 1 0 0 1 1 1 0 Nucleoside H+ symporter DUF420 PF04238.12 NODE_57293_length_295_cov_93.165385_g49354_i0reverse_frame_2 - 0.012 15.9 1.5 0.014 15.7 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF420) DUF2379 PF09543.10 NODE_57288_length_295_cov_144.700000_g49349_i0reverse_frame_3 - 0.068 13.4 0.2 0.091 13.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2379) E1_UFD PF09358.10 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_2 - 0.12 13.1 2.5 0.27 11.9 1.4 1.9 1 1 1 2 2 2 0 Ubiquitin fold domain Babuvirus_MP PF07234.11 NODE_57281_length_295_cov_234.238462_g49342_i0forward_frame_2 - 0.11 12.7 0.3 0.13 12.4 0.3 1.2 1 0 0 1 1 1 0 Movement and RNA silencing protein eIF-4B PF06273.11 NODE_57280_length_295_cov_246.334615_g49341_i0reverse_frame_2 - 0.093 11.8 0.1 0.12 11.5 0.1 1.1 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B TMEM132D_C PF15706.5 NODE_57279_length_295_cov_309.357692_g49340_i0reverse_frame_3 - 0.037 13.8 0.5 0.19 11.5 0.5 1.9 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term BRX PF08381.11 NODE_57274_length_295_cov_844.026923_g49335_i0reverse_frame_2 - 0.018 14.4 0.1 0.028 13.8 0.1 1.2 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 MFS_1 PF07690.16 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_3 - 7.8e-09 34.9 5.7 9.3e-09 34.7 5.7 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_3 - 3.3e-05 22.9 2.8 4e-05 22.6 2.4 1.4 1 1 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_3 - 0.0023 16.9 2.9 0.0025 16.8 2.9 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter Pam17 PF08566.10 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_3 - 0.3 10.9 0.5 0.45 10.3 0.3 1.3 1 1 0 1 1 1 0 Mitochondrial import protein Pam17 CcdA PF07362.12 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_2 - 0.034 14.6 0.1 0.049 14.1 0.1 1.2 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA RRN3 PF05327.11 NODE_57269_length_296_cov_0.969349_g49330_i0forward_frame_2 - 0.0042 15.7 0.2 0.0052 15.4 0.2 1.1 1 0 0 1 1 1 1 RNA polymerase I specific transcription initiation factor RRN3 Aa_trans PF01490.18 NODE_57264_length_296_cov_1.226054_g49325_i0reverse_frame_3 - 0.037 12.7 0.1 0.038 12.7 0.1 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Palm_thioest PF02089.15 NODE_57262_length_296_cov_1.291188_g49323_i0forward_frame_3 - 0.0023 17.8 0.0 0.0025 17.7 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase CPL PF08144.11 NODE_57262_length_296_cov_1.291188_g49323_i0forward_frame_3 - 0.018 15.4 0.0 0.021 15.2 0.0 1.1 1 0 0 1 1 1 0 CPL (NUC119) domain RE_CfrBI PF09516.10 NODE_57262_length_296_cov_1.291188_g49323_i0forward_frame_2 - 0.061 12.7 0.0 0.067 12.6 0.0 1.0 1 0 0 1 1 1 0 CfrBI restriction endonuclease Roc PF08477.13 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_2 - 1.9e-07 31.3 0.1 2.5e-07 30.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_2 - 6e-07 29.2 0.1 7.9e-07 28.8 0.1 1.4 1 1 0 1 1 1 1 Ras family Oest_recep PF02159.15 NODE_57260_length_296_cov_1.306513_g49321_i0forward_frame_2 - 0.039 14.4 2.3 0.048 14.1 1.0 1.6 1 1 1 2 2 2 0 Oestrogen receptor DUF327 PF03885.13 NODE_57259_length_296_cov_1.310345_g49320_i0reverse_frame_2 - 0.027 14.4 1.3 0.034 14.1 1.3 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF327) Mem_trans PF03547.18 NODE_57259_length_296_cov_1.310345_g49320_i0forward_frame_2 - 0.18 10.2 2.9 0.2 10.0 2.9 1.1 1 0 0 1 1 1 0 Membrane transport protein Bunya_G2 PF03563.13 NODE_57259_length_296_cov_1.310345_g49320_i0forward_frame_2 - 1.4 8.1 10.8 1.5 8.0 10.8 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 CTX_RstB PF07459.11 NODE_57258_length_296_cov_1.321839_g49319_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 CTX phage RstB protein TerY_C PF15616.6 NODE_57256_length_296_cov_1.425287_g49317_i0reverse_frame_2 - 0.016 15.3 0.5 0.017 15.2 0.5 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain zf-B_box PF00643.24 NODE_57256_length_296_cov_1.425287_g49317_i0reverse_frame_2 - 0.023 14.9 0.8 0.042 14.0 0.8 1.5 1 0 0 1 1 1 0 B-box zinc finger EbsA PF17255.2 NODE_57251_length_296_cov_1.597701_g49312_i0reverse_frame_3 - 0.016 15.6 1.9 0.019 15.3 1.9 1.0 1 0 0 1 1 1 0 EbsA-like protein Atrophin-1 PF03154.15 NODE_57251_length_296_cov_1.597701_g49312_i0reverse_frame_3 - 0.39 8.9 2.1 0.42 8.8 2.1 1.0 1 0 0 1 1 1 0 Atrophin-1 family Fmp27_WPPW PF10359.9 NODE_57251_length_296_cov_1.597701_g49312_i0reverse_frame_3 - 1.5 7.5 9.3 1.7 7.4 9.3 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain NSP11 PF06471.12 NODE_57247_length_296_cov_1.666667_g49308_i0forward_frame_2 - 0.14 10.6 0.2 0.14 10.6 0.2 1.1 1 0 0 1 1 1 0 NSP11 Cyclin_N PF00134.23 NODE_57246_length_296_cov_1.670498_g49307_i0forward_frame_3 - 5e-10 39.2 0.1 6.8e-10 38.8 0.1 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain DUF4187 PF13821.6 NODE_57245_length_296_cov_1.674330_g49306_i0reverse_frame_3 - 0.046 13.5 3.6 0.22 11.3 4.5 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4187) NDT80_PhoG PF05224.12 NODE_57245_length_296_cov_1.674330_g49306_i0forward_frame_2 - 0.097 12.9 0.1 0.1 12.8 0.1 1.1 1 0 0 1 1 1 0 NDT80 / PhoG like DNA-binding family COesterase PF00135.28 NODE_57244_length_296_cov_1.678161_g49305_i0reverse_frame_3 - 0.16 10.8 0.0 0.16 10.8 0.0 1.0 1 0 0 1 1 1 0 Carboxylesterase family Macoilin PF09726.9 NODE_57241_length_296_cov_1.727969_g49302_i0reverse_frame_2 - 8.6 4.8 5.2 10 4.5 5.2 1.0 1 0 0 1 1 1 0 Macoilin family SAM35 PF10806.8 NODE_57240_length_296_cov_1.804598_g49301_i0reverse_frame_3 - 0.073 13.3 0.6 0.11 12.8 0.6 1.2 1 0 0 1 1 1 0 SAM35, subunit of SAM coomplex DeoC PF01791.9 NODE_57239_length_296_cov_1.804598_g49300_i0forward_frame_3 - 0.0092 15.6 0.1 0.0092 15.6 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase Phage_Orf51 PF06194.11 NODE_57234_length_296_cov_1.877395_g49295_i0reverse_frame_2 - 0.036 14.1 0.0 0.051 13.6 0.0 1.2 1 0 0 1 1 1 0 Phage Conserved Open Reading Frame 51 PKHD_C PF18331.1 NODE_57232_length_296_cov_1.885057_g49293_i0forward_frame_2 - 0.17 12.0 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 PKHD-type hydroxylase C-terminal domain Glyco_hydro_20 PF00728.22 NODE_57230_length_296_cov_1.938697_g49291_i0forward_frame_3 - 7.8e-36 124.2 0.1 8.6e-36 124.0 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain ASC PF00858.24 NODE_57228_length_296_cov_2.015326_g49289_i0forward_frame_2 - 0.04 12.9 0.5 0.039 12.9 0.5 1.0 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel CCER1 PF15482.6 NODE_57227_length_296_cov_2.107280_g49288_i0reverse_frame_3 - 3.8 7.3 9.7 4.4 7.2 9.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 FAD_binding_2 PF00890.24 NODE_57227_length_296_cov_2.107280_g49288_i0reverse_frame_2 - 1.7e-06 27.4 0.0 1.7e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain Phage_pRha PF09669.10 NODE_57226_length_296_cov_2.134100_g49287_i0forward_frame_3 - 0.11 13.1 1.7 0.14 12.7 1.7 1.1 1 0 0 1 1 1 0 Phage regulatory protein Rha (Phage_pRha) DUF3112 PF11309.8 NODE_57225_length_296_cov_2.145594_g49286_i0reverse_frame_3 - 0.023 14.1 0.8 0.024 14.1 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) DUF996 PF06195.13 NODE_57225_length_296_cov_2.145594_g49286_i0forward_frame_3 - 0.03 14.6 3.0 0.033 14.5 3.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF996) MASE1 PF05231.14 NODE_57222_length_296_cov_2.283525_g49283_i0forward_frame_3 - 1.8e-20 73.3 11.4 1.9e-20 73.2 11.4 1.0 1 0 0 1 1 1 1 MASE1 Calcyon PF06387.11 NODE_57219_length_296_cov_2.398467_g49280_i0forward_frame_2 - 0.21 11.6 0.0 0.25 11.3 0.0 1.1 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) DUF1955 PF09205.10 NODE_57216_length_296_cov_2.501916_g49277_i0reverse_frame_2 - 0.017 14.8 0.3 0.017 14.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) LUC7 PF03194.15 NODE_57216_length_296_cov_2.501916_g49277_i0reverse_frame_2 - 0.051 13.2 4.4 0.06 13.0 4.4 1.0 1 0 0 1 1 1 0 LUC7 N_terminus DUF1654 PF07867.11 NODE_57214_length_296_cov_2.528736_g49275_i0reverse_frame_3 - 0.13 12.1 0.1 0.19 11.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1654) Tombus_movement PF05318.12 NODE_57211_length_296_cov_2.662835_g49272_i0forward_frame_2 - 1.6 9.6 3.5 3.2 8.6 0.3 2.0 1 1 0 2 2 2 0 Tombusvirus movement protein Pkinase PF00069.25 NODE_57208_length_296_cov_2.724138_g49269_i0forward_frame_2 - 0.00018 21.0 0.0 0.00019 20.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain SBP_bac_8 PF13416.6 NODE_57206_length_296_cov_2.750958_g49267_i0reverse_frame_2 - 6.5e-05 22.9 0.1 7.6e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 NODE_57206_length_296_cov_2.750958_g49267_i0reverse_frame_2 - 0.048 13.1 0.0 0.052 12.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein Caskin1-CID PF16600.5 NODE_57206_length_296_cov_2.750958_g49267_i0forward_frame_3 - 0.087 13.4 0.9 0.13 12.9 0.9 1.2 1 0 0 1 1 1 0 Caskin1 CASK-interaction domain KTI12 PF08433.10 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_2 - 0.0044 16.5 1.3 0.005 16.3 1.3 1.0 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Caps_synth_GfcC PF06251.11 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_2 - 0.029 14.0 1.9 0.031 13.9 1.9 1.0 1 0 0 1 1 1 0 Capsule biosynthesis GfcC GH97_N PF14508.6 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_2 - 0.078 12.5 0.6 0.079 12.4 0.6 1.2 1 0 0 1 1 1 0 Glycosyl-hydrolase 97 N-terminal Spore_GerAC PF05504.11 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_2 - 0.1 12.8 6.2 0.11 12.7 6.2 1.2 1 1 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal Chordopox_A13L PF05961.11 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_2 - 3 8.2 6.0 3.6 7.9 0.4 2.3 1 1 1 2 2 2 0 Chordopoxvirus A13L protein MFS_4 PF06779.14 NODE_57203_length_296_cov_2.846743_g49264_i0forward_frame_3 - 3.5e-37 128.6 8.6 3.8e-37 128.4 8.6 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1 PF07690.16 NODE_57203_length_296_cov_2.846743_g49264_i0forward_frame_3 - 3.4e-05 22.9 15.2 3.7e-05 22.8 15.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF863 PF05904.11 NODE_57198_length_296_cov_3.107280_g49259_i0forward_frame_3 - 0.34 9.3 2.7 0.36 9.2 2.3 1.3 1 1 0 1 1 1 0 Plant protein of unknown function (DUF863) AstE_AspA PF04952.14 NODE_57195_length_296_cov_3.318008_g49256_i0reverse_frame_2 - 0.012 14.7 0.0 0.013 14.6 0.0 1.0 1 0 0 1 1 1 0 Succinylglutamate desuccinylase / Aspartoacylase family DUF3780 PF12635.7 NODE_57192_length_296_cov_3.892720_g49253_i0reverse_frame_2 - 0.2 11.4 0.5 0.23 11.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3780) Trypan_PARP PF05887.11 NODE_57189_length_296_cov_4.938697_g49250_i0forward_frame_3 - 0.15 12.1 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF1218 PF06749.12 NODE_57186_length_296_cov_6.482759_g49247_i0reverse_frame_2 - 0.028 14.9 0.4 0.041 14.4 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) Arylsulfotran_2 PF14269.6 NODE_57184_length_296_cov_19.229885_g49245_i0reverse_frame_2 - 0.072 12.4 0.0 0.085 12.2 0.0 1.1 1 0 0 1 1 1 0 Arylsulfotransferase (ASST) Dpoe2NT PF12213.8 NODE_57182_length_296_cov_40.413793_g49243_i0reverse_frame_2 - 0.067 13.5 0.0 0.097 13.0 0.0 1.3 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal v110 PF01639.17 NODE_57180_length_296_cov_41.072797_g49241_i0forward_frame_2 - 0.08 12.8 0.6 0.12 12.3 0.6 1.3 1 0 0 1 1 1 0 Viral family 110 Hist_rich_Ca-bd PF10529.9 NODE_57178_length_296_cov_44.605364_g49239_i0forward_frame_2 - 3.1 8.1 5.5 4.2 7.7 5.5 1.2 1 0 0 1 1 1 0 Histidine-rich Calcium-binding repeat region GAIN_A PF18619.1 NODE_57177_length_296_cov_48.394636_g49238_i0forward_frame_2 - 0.034 14.3 0.1 0.058 13.6 0.1 1.3 1 0 0 1 1 1 0 GPCR-Autoproteolysis-INducing (GAIN) subdomain A SID-1_RNA_chan PF13965.6 NODE_57175_length_296_cov_51.647510_g49236_i0reverse_frame_3 - 0.13 10.7 0.7 0.13 10.6 0.7 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 TatD_DNase PF01026.21 NODE_57170_length_296_cov_57.532567_g49231_i0reverse_frame_2 - 1.8e-10 40.6 0.0 1.9e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase zf-Paramyx-P PF13008.7 NODE_57170_length_296_cov_57.532567_g49231_i0forward_frame_3 - 0.027 13.9 0.1 0.06 12.8 0.1 1.6 1 0 0 1 1 1 0 Zinc-binding domain of Paramyxoviridae V protein Mtc PF03820.17 NODE_57165_length_296_cov_66.356322_g49226_i0forward_frame_3 - 2e-16 59.9 0.1 2.2e-16 59.8 0.1 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier DCP1 PF06058.13 NODE_57165_length_296_cov_66.356322_g49226_i0forward_frame_3 - 0.1 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Dcp1-like decapping family MTTB PF06253.11 NODE_57164_length_296_cov_66.927203_g49225_i0reverse_frame_3 - 0.11 10.5 0.1 0.12 10.3 0.1 1.1 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) OAM_dimer PF16554.5 NODE_57164_length_296_cov_66.927203_g49225_i0reverse_frame_2 - 0.14 12.6 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain of d-ornithine 4,5-aminomutase Ribosomal_L39 PF00832.20 NODE_57163_length_296_cov_68.118774_g49224_i0forward_frame_2 - 4.1 7.1 10.0 2.1 8.1 0.4 2.8 2 1 0 2 2 2 0 Ribosomal L39 protein RE_Eco29kI PF09517.10 NODE_57162_length_296_cov_68.325670_g49223_i0forward_frame_3 - 0.042 13.5 0.0 0.046 13.3 0.0 1.2 1 0 0 1 1 1 0 Eco29kI restriction endonuclease Methyltrans_RNA PF04452.14 NODE_57155_length_296_cov_74.283525_g49216_i0forward_frame_2 - 9e-05 21.9 0.1 0.00022 20.7 0.0 1.6 2 0 0 2 2 2 1 RNA methyltransferase FAD_binding_2 PF00890.24 NODE_57152_length_296_cov_81.923372_g49213_i0forward_frame_2 - 9.1e-11 41.5 0.0 1e-10 41.3 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain ATXN-1_C PF12547.8 NODE_57150_length_296_cov_86.429119_g49211_i0forward_frame_2 - 0.85 10.0 4.5 1.1 9.6 0.5 2.3 2 0 0 2 2 2 0 Capicua transcriptional repressor modulator Zeta_toxin PF06414.12 NODE_57148_length_296_cov_92.850575_g49209_i0reverse_frame_3 - 0.0006 19.1 0.1 0.00064 19.1 0.1 1.1 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 NODE_57148_length_296_cov_92.850575_g49209_i0reverse_frame_3 - 0.0043 17.2 0.3 0.0047 17.1 0.3 1.1 1 0 0 1 1 1 1 AAA domain HemN_C PF06969.16 NODE_57145_length_296_cov_108.486590_g40215_i1reverse_frame_2 - 0.026 14.6 0.1 0.044 13.9 0.1 1.3 1 0 0 1 1 1 0 HemN C-terminal domain FNIP PF05725.12 NODE_57142_length_296_cov_163.122605_g49204_i0reverse_frame_2 - 2.1e-21 75.8 5.3 4.6e-10 39.5 0.4 2.1 2 0 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_57142_length_296_cov_163.122605_g49204_i0reverse_frame_2 - 0.0018 18.2 0.1 0.0023 17.9 0.1 1.2 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) LRR_1 PF00560.33 NODE_57142_length_296_cov_163.122605_g49204_i0reverse_frame_2 - 0.6 10.9 3.2 6.5 7.7 0.2 3.1 2 2 0 2 2 2 0 Leucine Rich Repeat KH_4 PF13083.6 NODE_57142_length_296_cov_163.122605_g49204_i0forward_frame_2 - 0.041 13.8 1.0 6.8 6.6 0.1 2.5 2 0 0 2 2 2 0 KH domain HalX PF08663.10 NODE_57142_length_296_cov_163.122605_g49204_i0forward_frame_2 - 0.22 11.9 4.9 2 8.8 0.3 2.5 1 1 1 2 2 2 0 HalX domain TIP39 PF14980.6 NODE_57135_length_296_cov_289.283525_g49197_i0reverse_frame_3 - 0.12 12.3 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 TIP39 peptide MCR PF18509.1 NODE_57135_length_296_cov_289.283525_g49197_i0forward_frame_2 - 0.13 11.9 0.1 0.21 11.2 0.1 1.3 1 0 0 1 1 1 0 Magnetochrome domain NiFe_hyd_SSU_C PF14720.6 NODE_57134_length_296_cov_315.536398_g49196_i0reverse_frame_2 - 0.16 12.3 2.0 0.23 11.8 0.7 1.8 1 1 1 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal DUF3915 PF13054.6 NODE_57133_length_296_cov_331.486590_g49195_i0reverse_frame_2 - 0.22 11.5 4.3 0.16 11.9 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3915) BBP1_C PF15272.6 NODE_57130_length_296_cov_344.471264_g49192_i0reverse_frame_3 - 0.011 15.6 0.3 0.013 15.4 0.3 1.0 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal Topo_C_assoc PF14370.6 NODE_57130_length_296_cov_344.471264_g49192_i0reverse_frame_2 - 0.073 13.0 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 C-terminal topoisomerase domain DUF4702 PF15774.5 NODE_57126_length_296_cov_480.272031_g49188_i0reverse_frame_2 - 0.0098 14.9 0.0 0.012 14.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4702) PDR_CDR PF06422.12 NODE_57125_length_296_cov_703.463602_g49187_i0forward_frame_2 - 0.076 12.9 0.5 0.097 12.6 0.5 1.2 1 0 0 1 1 1 0 CDR ABC transporter Rrn6 PF10214.9 NODE_57121_length_296_cov_12029.252874_g49183_i0forward_frame_3 - 0.19 10.2 5.5 0.19 10.2 5.5 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF5538 PF17692.1 NODE_57120_length_296_cov_21235.080460_g49182_i0reverse_frame_2 - 0.13 12.3 4.1 0.16 12.0 4.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) DUF3482 PF11981.8 NODE_57120_length_296_cov_21235.080460_g49182_i0forward_frame_3 - 0.37 10.1 11.4 0.28 10.5 10.4 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3482) Ureide_permease PF07168.11 NODE_57108_length_297_cov_1.312977_g49170_i0forward_frame_2 - 0.034 12.9 0.1 0.04 12.7 0.1 1.1 1 0 0 1 1 1 0 Ureide permease DUF2140 PF09911.9 NODE_57107_length_297_cov_1.320611_g49169_i0reverse_frame_3 - 0.005 16.4 0.0 0.0088 15.6 0.0 1.4 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2140) Mid2 PF04478.12 NODE_57107_length_297_cov_1.320611_g49169_i0forward_frame_2 - 0.058 13.2 0.5 0.058 13.2 0.5 1.6 1 1 1 2 2 2 0 Mid2 like cell wall stress sensor Peptidase_C15 PF01470.17 NODE_57102_length_297_cov_1.438931_g49164_i0forward_frame_2 - 0.21 11.7 0.1 0.24 11.5 0.1 1.1 1 0 0 1 1 1 0 Pyroglutamyl peptidase Popeye PF04831.13 NODE_57101_length_297_cov_1.458015_g49163_i0reverse_frame_2 - 0.12 12.6 1.0 0.13 12.4 1.0 1.2 1 0 0 1 1 1 0 Popeye protein conserved region DUF629 PF04780.12 NODE_57097_length_297_cov_1.622137_g49159_i0reverse_frame_2 - 0.017 13.7 0.0 0.02 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) DUF2921 PF11145.8 NODE_57097_length_297_cov_1.622137_g49159_i0reverse_frame_2 - 0.025 12.5 0.1 0.025 12.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2921) PGM_PMM_I PF02878.16 NODE_57096_length_297_cov_1.625954_g49158_i0forward_frame_2 - 2.3e-14 53.3 0.0 4.7e-09 36.1 0.0 2.0 2 0 0 2 2 2 2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DUF1687 PF07955.11 NODE_57095_length_297_cov_1.656489_g49157_i0reverse_frame_3 - 0.048 14.1 0.1 0.048 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1687) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks242.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks242.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks242.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks242.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EamA PF00892.20 NODE_57092_length_297_cov_1.698473_g49154_i0forward_frame_3 - 4.2e-05 23.7 12.4 0.0021 18.2 0.9 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF5496 PF17600.2 NODE_57091_length_297_cov_1.725191_g49153_i0reverse_frame_3 - 0.24 11.5 1.7 0.28 11.3 0.4 1.6 1 1 1 2 2 2 0 Family of unknown function (DUF5496) LMP PF04778.12 NODE_57089_length_297_cov_1.751908_g49151_i0reverse_frame_3 - 0.02 14.8 0.9 0.025 14.5 0.9 1.1 1 0 0 1 1 1 0 LMP repeated region Lipin_mid PF16876.5 NODE_57089_length_297_cov_1.751908_g49151_i0reverse_frame_2 - 0.076 13.2 2.2 0.15 12.2 2.2 1.4 1 1 0 1 1 1 0 Lipin/Ned1/Smp2 multi-domain protein middle domain DUF601 PF04642.12 NODE_57088_length_297_cov_1.774809_g49150_i0reverse_frame_3 - 0.32 10.5 3.8 0.38 10.2 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF601 DUF629 PF04780.12 NODE_57088_length_297_cov_1.774809_g49150_i0reverse_frame_2 - 0.021 13.4 0.0 0.025 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) DUF2921 PF11145.8 NODE_57088_length_297_cov_1.774809_g49150_i0reverse_frame_2 - 0.022 12.6 0.1 0.023 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2921) Stn1_C PF12659.7 NODE_57086_length_297_cov_1.824427_g49148_i0reverse_frame_2 - 0.0061 16.5 0.2 0.0076 16.2 0.2 1.1 1 0 0 1 1 1 1 Telomere capping C-terminal wHTH DUF3446 PF11928.8 NODE_57084_length_297_cov_1.862595_g49146_i0forward_frame_2 - 0.0049 17.1 2.2 0.0063 16.8 2.2 1.1 1 0 0 1 1 1 1 Early growth response N-terminal domain SHIPPO-rpt PF07004.12 NODE_57080_length_297_cov_1.912214_g49142_i0reverse_frame_2 - 0.00065 20.5 3.0 0.02 15.8 0.2 2.4 2 1 0 2 2 2 2 Sperm-tail PG-rich repeat KIAA1328 PF15369.6 NODE_57079_length_297_cov_1.923664_g49141_i0reverse_frame_3 - 0.85 9.4 4.1 0.95 9.2 4.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein KIAA1328 Thg1C PF14413.6 NODE_57078_length_297_cov_1.954198_g49140_i0reverse_frame_2 - 0.08 13.1 0.3 0.13 12.5 0.3 1.3 1 0 0 1 1 1 0 Thg1 C terminal domain HCO3_cotransp PF00955.21 NODE_57074_length_297_cov_1.988550_g49136_i0forward_frame_2 - 1.9e-19 69.9 1.2 2.4e-19 69.6 1.2 1.0 1 0 0 1 1 1 1 HCO3- transporter family Tudor_1_RapA PF18339.1 NODE_57070_length_297_cov_2.041985_g49132_i0reverse_frame_2 - 0.084 12.8 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 RapA N-terminal Tudor like domain 1 DUF4635 PF15466.6 NODE_57065_length_297_cov_2.137405_g49127_i0reverse_frame_3 - 0.053 13.0 0.3 0.065 12.7 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4635) RPN1_C PF18051.1 NODE_57063_length_297_cov_2.213740_g49125_i0reverse_frame_3 - 0.047 13.7 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal RMMBL PF07521.12 NODE_57061_length_297_cov_2.232824_g49123_i0forward_frame_3 - 0.00012 22.0 0.2 0.00068 19.5 0.1 1.9 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Beta-Casp PF10996.8 NODE_57061_length_297_cov_2.232824_g49123_i0forward_frame_3 - 0.00067 19.9 0.0 0.00099 19.4 0.0 1.3 1 0 0 1 1 1 1 Beta-Casp domain Beta-Casp PF10996.8 NODE_57061_length_297_cov_2.232824_g49123_i0forward_frame_2 - 9.8e-05 22.6 0.0 0.00013 22.2 0.0 1.2 1 0 0 1 1 1 1 Beta-Casp domain Aminotran_1_2 PF00155.21 NODE_57057_length_297_cov_2.427481_g49119_i0reverse_frame_2 - 1.8e-18 66.9 0.0 1.9e-18 66.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Oest_recep PF02159.15 NODE_57057_length_297_cov_2.427481_g49119_i0reverse_frame_2 - 0.034 14.6 0.0 0.041 14.4 0.0 1.1 1 0 0 1 1 1 0 Oestrogen receptor Gpi16 PF04113.14 NODE_57056_length_297_cov_2.519084_g49118_i0reverse_frame_3 - 0.042 12.3 0.2 0.05 12.0 0.2 1.1 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component SBP_bac_5 PF00496.22 NODE_57054_length_297_cov_2.564885_g49116_i0forward_frame_3 - 2.1e-18 66.4 0.0 2.5e-18 66.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Homeodomain PF00046.29 NODE_57054_length_297_cov_2.564885_g49116_i0forward_frame_3 - 0.061 13.2 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Homeodomain DUF3464 PF11947.8 NODE_57053_length_297_cov_2.603053_g49115_i0reverse_frame_2 - 0.23 11.2 1.6 0.18 11.5 0.8 1.3 1 1 0 1 1 1 0 Photosynthesis affected mutant 68 Oxysterol_BP PF01237.18 NODE_57051_length_297_cov_2.732824_g49113_i0reverse_frame_2 - 1.2e-23 83.6 0.0 1.3e-23 83.5 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein DUF992 PF06186.11 NODE_57050_length_297_cov_2.748092_g49112_i0reverse_frame_2 - 0.13 12.1 0.1 0.16 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF992) DUF2838 PF10998.8 NODE_57047_length_297_cov_2.877863_g49109_i0forward_frame_2 - 0.015 15.5 4.5 0.016 15.5 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) Molydop_binding PF01568.21 NODE_57046_length_297_cov_2.900763_g49108_i0reverse_frame_3 - 8.1e-20 70.9 0.0 9.2e-20 70.7 0.0 1.0 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain PUA_3 PF17785.1 NODE_57046_length_297_cov_2.900763_g49108_i0reverse_frame_3 - 0.016 15.0 0.0 0.023 14.5 0.0 1.2 1 0 0 1 1 1 0 PUA-like domain LapD_MoxY_N PF16448.5 NODE_57046_length_297_cov_2.900763_g49108_i0forward_frame_2 - 0.12 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 LapD/MoxY periplasmic domain Arm-DNA-bind_3 PF13356.6 NODE_57041_length_297_cov_3.049618_g49103_i0forward_frame_2 - 0.02 15.2 1.5 0.025 14.9 1.1 1.5 1 1 0 1 1 1 0 Arm DNA-binding domain PSI_integrin PF17205.3 NODE_57036_length_297_cov_3.729008_g49098_i0reverse_frame_2 - 0.073 12.8 4.0 0.12 12.2 4.0 1.5 1 1 0 1 1 1 0 Integrin plexin domain AAA_23 PF13476.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 7.1e-23 82.2 0.0 8.1e-23 82.0 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 2.8e-08 33.4 0.0 3.7e-08 33.0 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain T2SSE PF00437.20 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 1.1e-05 24.6 0.0 1.1e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein SMC_N PF02463.19 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.00012 21.6 0.0 0.00012 21.6 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.00014 22.4 0.0 0.00017 22.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_15 PF13175.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.00025 20.9 0.0 0.00025 20.9 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0003 20.7 0.0 0.00033 20.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_27 PF13514.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0014 18.3 0.0 0.0015 18.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0019 17.9 0.0 0.0021 17.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0019 17.8 0.0 0.0023 17.6 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0022 18.3 0.0 0.0025 18.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0024 17.8 0.0 0.0027 17.6 0.0 1.2 1 0 0 1 1 1 1 NACHT domain NTPase_1 PF03266.15 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0043 17.0 0.0 0.006 16.5 0.0 1.3 1 0 0 1 1 1 1 NTPase ABC_ATPase PF09818.9 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.005 15.7 0.0 0.0067 15.3 0.0 1.1 1 0 0 1 1 1 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.008 16.1 0.0 0.0085 16.0 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase TsaE PF02367.17 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0091 16.0 0.0 0.014 15.4 0.0 1.3 1 1 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.014 14.9 0.0 0.017 14.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.015 15.7 0.0 0.015 15.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.024 14.7 0.0 0.03 14.4 0.0 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_14 PF13173.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.046 13.8 0.0 0.056 13.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.051 13.1 0.0 0.064 12.8 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_19 PF13245.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.054 13.8 0.0 0.061 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.056 13.9 0.0 0.064 13.7 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.06 13.6 0.4 0.078 13.2 0.4 1.3 1 1 0 1 1 1 0 AAA domain MobB PF03205.14 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.065 13.1 0.0 0.083 12.8 0.0 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.066 13.8 0.0 0.087 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.087 13.2 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.11 12.3 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF87 PF01935.17 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.11 12.6 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_11 PF13086.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.13 12.0 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.13 12.0 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein DUF2075 PF09848.9 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.16 11.2 0.0 0.17 11.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.16 12.0 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit TEA PF01285.18 NODE_57032_length_297_cov_4.335878_g49094_i0reverse_frame_3 - 0.13 12.4 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 TEA/ATTS domain Myotub-related PF06602.14 NODE_57032_length_297_cov_4.335878_g49094_i0forward_frame_3 - 4.8e-50 170.5 0.8 5.2e-50 170.4 0.8 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain zf_CCCH_4 PF18345.1 NODE_57031_length_297_cov_4.339695_g49093_i0reverse_frame_3 - 0.2 11.7 0.2 1.5 9.0 0.1 2.1 2 0 0 2 2 2 0 Zinc finger domain Glyco_transf_4 PF13439.6 NODE_57028_length_297_cov_5.790076_g49090_i0forward_frame_3 - 0.03 14.3 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 Glycosyltransferase Family 4 CEP44 PF15007.6 NODE_57026_length_297_cov_16.740458_g49088_i0reverse_frame_3 - 0.056 13.6 0.8 0.13 12.4 0.4 1.6 1 1 1 2 2 2 0 Centrosomal spindle body, CEP44 LPD38 PF18857.1 NODE_57020_length_297_cov_40.484733_g49082_i0reverse_frame_3 - 0.065 13.4 0.0 0.071 13.3 0.0 1.0 1 0 0 1 1 1 0 Large polyvalent protein associated domain 38 Etmic-2 PF06670.11 NODE_57016_length_297_cov_49.561069_g49078_i0forward_frame_3 - 0.076 11.9 2.3 0.083 11.8 2.3 1.0 1 0 0 1 1 1 0 Microneme protein Etmic-2 TOH_N PF12549.8 NODE_57007_length_297_cov_66.526718_g49069_i0forward_frame_3 - 0.078 12.8 0.9 0.13 12.1 0.0 1.8 2 0 0 2 2 2 0 Tyrosine hydroxylase N terminal DUF4994 PF16385.5 NODE_57005_length_297_cov_74.335878_g49067_i0forward_frame_3 - 0.001 18.9 0.0 0.0021 18.0 0.0 1.6 1 1 0 1 1 1 1 Domain of unknown function DUF4976 PF16347.5 NODE_57005_length_297_cov_74.335878_g49067_i0forward_frame_3 - 0.041 14.1 0.0 0.048 13.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) Sulfatase_C PF14707.6 NODE_57005_length_297_cov_74.335878_g49067_i0forward_frame_3 - 0.15 12.8 0.0 0.15 12.8 0.0 1.2 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase Enolase_like_N PF18374.1 NODE_57001_length_297_cov_91.633588_g49063_i0forward_frame_3 - 0.035 13.5 0.1 0.07 12.5 0.1 1.5 1 0 0 1 1 1 0 Enolase N-terminal domain-like DUF5345 PF17280.2 NODE_57000_length_297_cov_94.263359_g49062_i0reverse_frame_2 - 0.28 11.2 0.5 19 5.3 0.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5345) Allene_ox_cyc PF06351.11 NODE_56998_length_297_cov_109.206107_g49060_i0reverse_frame_2 - 0.018 14.8 0.0 0.023 14.5 0.0 1.2 1 0 0 1 1 1 0 Allene oxide cyclase EF-hand_7 PF13499.6 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_3 - 0.0039 17.6 0.1 0.0074 16.7 0.1 1.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_3 - 0.0051 16.3 0.0 0.0075 15.7 0.0 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_3 - 0.039 13.9 0.0 0.064 13.2 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain DUF4720 PF15846.5 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_3 - 0.12 12.3 0.1 0.13 12.1 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4720) UPF0179 PF03684.13 NODE_56993_length_297_cov_142.263359_g49055_i0reverse_frame_2 - 0.15 11.9 0.1 0.26 11.2 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0179) RuBisCo_chap_C PF18087.1 NODE_56993_length_297_cov_142.263359_g49055_i0forward_frame_3 - 0.17 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Rubisco Assembly chaperone C-terminal domain Synapsin_N PF10581.9 NODE_56989_length_297_cov_186.343511_g49051_i0forward_frame_2 - 0.04 13.9 1.0 0.086 12.8 1.0 1.5 1 0 0 1 1 1 0 Synapsin N-terminal LANC_like PF05147.13 NODE_56988_length_297_cov_204.022901_g49050_i0reverse_frame_3 - 0.0027 16.3 0.0 0.003 16.2 0.0 1.1 1 0 0 1 1 1 1 Lanthionine synthetase C-like protein DEAD_2 PF06733.15 NODE_56987_length_297_cov_207.290076_g49049_i0reverse_frame_3 - 0.1 12.2 0.3 0.11 12.1 0.3 1.1 1 0 0 1 1 1 0 DEAD_2 EXS PF03124.14 NODE_56984_length_297_cov_497.729008_g49046_i0forward_frame_3 - 0.1 11.9 0.2 0.14 11.5 0.2 1.3 1 1 0 1 1 1 0 EXS family SDA1 PF05285.12 NODE_56981_length_297_cov_1218.603053_g49043_i0forward_frame_3 - 5.7 6.3 11.3 7.4 5.9 11.3 1.1 1 0 0 1 1 1 0 SDA1 Clathrin_bdg PF15045.6 NODE_56979_length_297_cov_1837.362595_g49041_i0reverse_frame_2 - 0.074 13.1 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 Clathrin-binding box of Aftiphilin, vesicle trafficking DUF1455 PF07306.11 NODE_56976_length_297_cov_2466.400763_g49038_i0reverse_frame_3 - 0.15 12.0 0.1 0.2 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1455) MMPL PF03176.15 NODE_56974_length_297_cov_73402.167939_g49036_i0forward_frame_2 - 0.84 8.5 5.7 0.96 8.3 5.7 1.0 1 0 0 1 1 1 0 MMPL family Corona_M PF01635.18 NODE_56973_length_297_cov_73406.664122_g49035_i0reverse_frame_2 - 0.28 10.5 6.4 0.34 10.2 6.4 1.0 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein MORN PF02493.20 NODE_56973_length_297_cov_73406.664122_g49035_i0forward_frame_2 - 6.6e-05 22.6 0.4 0.022 14.6 0.1 2.6 2 0 0 2 2 2 2 MORN repeat Ribosomal_L37ae PF01780.19 ORF99724 - 5e-30 103.4 2.7 5.8e-30 103.2 2.7 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family FAM165 PF14981.6 ORF99415 - 0.13 12.1 0.1 0.2 11.5 0.1 1.3 1 0 0 1 1 1 0 FAM165 family DUF3874 PF12990.7 ORF98751 - 0.14 12.5 0.2 8.3 6.8 0.0 2.3 1 1 0 2 2 2 0 Domain of unknonw function from B. Theta Gene description (DUF3874) DUF2681 PF10883.8 ORF98471 - 0.085 13.3 0.3 0.14 12.5 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) GH101_N PF17995.1 ORF98341 - 0.027 14.1 1.7 2.6 7.7 0.3 1.9 1 1 1 2 2 2 0 Endo-alpha-N-acetylgalactosaminidase N-terminal Corona_NS3b PF03053.14 ORF98125 - 0.089 12.5 0.5 0.11 12.3 0.5 1.1 1 0 0 1 1 1 0 ORF3b coronavirus protein Ploopntkinase1 PF18748.1 ORF97091 - 0.0049 16.4 0.0 0.0059 16.2 0.0 1.1 1 0 0 1 1 1 1 P-loop Nucleotide Kinase1 FtsQ PF03799.15 ORF96697 - 0.016 16.1 0.1 0.017 15.9 0.1 1.1 1 0 0 1 1 1 0 Cell division protein FtsQ Protocadherin PF08374.11 ORF96697 - 0.039 13.9 1.7 0.039 13.9 1.7 1.1 1 0 0 1 1 1 0 Protocadherin IBD PF10416.9 ORF96697 - 0.16 12.0 6.1 0.93 9.5 6.1 1.9 1 1 0 1 1 1 0 Transcription-initiator DNA-binding domain IBD DUF2244 PF10003.9 ORF96697 - 0.24 11.0 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) TetR_C_2 PF08361.11 ORF96109 - 3.5e-27 94.9 0.1 4e-27 94.7 0.1 1.1 1 0 0 1 1 1 1 MAATS-type transcriptional repressor, C-terminal region TetR_C_4 PF08359.11 ORF96109 - 2.4e-06 27.8 0.1 3e-06 27.4 0.1 1.2 1 0 0 1 1 1 1 YsiA-like protein, C-terminal region GntR PF00392.21 ORF96109 - 0.06 13.0 0.0 0.092 12.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family GST_C_5 PF16865.5 ORF96109 - 0.1 13.2 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Membralin PF09746.9 ORF95651 - 0.00066 18.8 0.9 0.00073 18.7 0.9 1.1 1 0 0 1 1 1 1 Tumour-associated protein ETRAMP PF09716.10 ORF95651 - 0.012 15.6 0.1 0.019 15.0 0.1 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF2207 PF09972.9 ORF95651 - 0.028 13.2 1.0 0.028 13.2 1.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4191 PF13829.6 ORF95651 - 0.2 11.0 0.4 0.21 10.9 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF3810 PF12725.7 ORF95651 - 0.21 10.9 0.3 0.25 10.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF4492 PF14899.6 ORF95651 - 0.56 10.2 5.7 0.39 10.7 2.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4492) GAS2 PF02187.17 ORF94575 - 1.8e-08 34.3 0.4 2.9e-08 33.7 0.1 1.5 2 0 0 2 2 2 1 Growth-Arrest-Specific Protein 2 Domain LRR_11 PF18831.1 ORF93276 - 0.057 13.0 4.0 19 5.0 0.1 3.7 2 1 2 4 4 4 0 Leucine-rich repeat NADHdh-2_N PF12155.8 ORF93276 - 0.11 12.9 5.5 0.35 11.3 1.3 2.2 1 1 1 2 2 2 0 NADH dehydrogenase subunit 2 N-terminal Pentapeptide_3 PF13576.6 ORF93276 - 0.23 11.6 10.0 1.4e+02 2.8 10.0 3.9 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) LRR_11 PF18831.1 ORF93240 - 0.057 13.0 4.0 19 5.0 0.1 3.7 2 1 2 4 4 4 0 Leucine-rich repeat NADHdh-2_N PF12155.8 ORF93240 - 0.11 12.9 5.5 0.35 11.3 1.3 2.2 1 1 1 2 2 2 0 NADH dehydrogenase subunit 2 N-terminal Pentapeptide_3 PF13576.6 ORF93240 - 0.23 11.6 10.0 1.4e+02 2.8 10.0 3.9 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) Rep_fac_C PF08542.11 ORF93084 - 0.058 13.8 0.0 0.086 13.3 0.0 1.3 1 0 0 1 1 1 0 Replication factor C C-terminal domain DUF5420 PF17457.2 ORF92603 - 0.002 18.0 1.3 0.0024 17.8 1.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5420) Keratin_2_head PF16208.5 ORF92279 - 0.94 9.6 10.9 1.1 9.4 10.9 1.2 1 0 0 1 1 1 0 Keratin type II head DUF4337 PF14235.6 ORF9185 - 1.8 8.7 5.5 2.2 8.3 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4441 PF14536.6 ORF91810 - 0.0042 17.3 0.4 0.0051 17.0 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4441) DUF913 PF06025.12 ORF91810 - 0.036 13.0 0.0 0.038 13.0 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) YcgR_2 PF12945.7 ORF91810 - 0.14 12.3 0.3 5.4 7.2 0.0 2.2 1 1 1 2 2 2 0 Flagellar protein YcgR ARS2 PF04959.13 ORF91104 - 0.22 11.9 1.1 0.24 11.7 1.1 1.1 1 0 0 1 1 1 0 Arsenite-resistance protein 2 DUF104 PF01954.16 ORF91104 - 0.26 11.7 7.0 0.5 10.9 7.0 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF104 Z1 PF10593.9 ORF91104 - 0.41 10.1 3.2 0.47 9.9 3.2 1.1 1 0 0 1 1 1 0 Z1 domain DHDPS PF00701.22 ORF90976 - 5.2e-32 110.7 0.0 5.7e-32 110.6 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family YCII PF03795.14 ORF90976 - 0.13 12.7 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 YCII-related domain GCD14 PF08704.10 ORF90046 - 1.2e-12 48.1 1.9 1.3e-12 47.9 1.9 1.0 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit CPSF100_C PF13299.6 ORF90046 - 0.0059 16.8 1.0 0.0069 16.6 1.0 1.1 1 0 0 1 1 1 1 Cleavage and polyadenylation factor 2 C-terminal CRA PF06589.11 ORF90046 - 0.12 12.5 6.9 0.14 12.2 6.9 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) YqfQ PF14181.6 ORF90046 - 0.24 11.6 4.2 0.29 11.3 4.2 1.1 1 0 0 1 1 1 0 YqfQ-like protein Peptidase_S49_N PF08496.10 ORF90046 - 0.91 9.6 5.4 1.1 9.4 5.4 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal FAM176 PF14851.6 ORF90046 - 9.2 5.9 7.6 17 5.1 7.6 1.5 1 1 0 1 1 1 0 FAM176 family Hydrophob_seed PF14547.6 ORF89905 - 0.11 12.7 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Hydrophobic seed protein SOBP PF15279.6 ORF89894 - 1.7 9.2 12.6 1.8 9.1 12.6 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein Apt1 PF10351.9 ORF89894 - 9.6 4.9 17.1 10 4.8 17.1 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF4441 PF14536.6 ORF89371 - 0.0042 17.3 0.4 0.0051 17.0 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4441) DUF913 PF06025.12 ORF89371 - 0.036 13.0 0.0 0.038 13.0 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) YcgR_2 PF12945.7 ORF89371 - 0.14 12.3 0.3 5.4 7.2 0.0 2.2 1 1 1 2 2 2 0 Flagellar protein YcgR DUSP PF06337.12 ORF88708 - 2.9e-10 40.6 0.2 3.6e-10 40.3 0.2 1.2 1 0 0 1 1 1 1 DUSP domain Fimbrial PF00419.20 ORF88479 - 0.00042 20.6 4.0 0.00046 20.5 4.0 1.0 1 0 0 1 1 1 1 Fimbrial protein Lustrin_cystein PF14625.6 ORF88316 - 0.68 10.4 9.9 0.21 12.0 6.1 2.3 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain P-mevalo_kinase PF04275.14 ORF88082 - 7.7e-05 22.6 0.5 8.4e-05 22.5 0.5 1.1 1 0 0 1 1 1 1 Phosphomevalonate kinase DUF4420 PF14390.6 ORF88082 - 0.0053 16.0 0.1 0.0054 16.0 0.1 1.0 1 0 0 1 1 1 1 Putative PD-(D/E)XK family member, (DUF4420) Cytochrom_B562 PF07361.11 ORF88082 - 0.022 15.4 0.1 0.025 15.2 0.1 1.1 1 0 0 1 1 1 0 Cytochrome b562 DUF1640 PF07798.11 ORF88082 - 0.047 13.7 1.8 0.058 13.4 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DUF2004 PF09406.10 ORF88082 - 0.056 13.8 0.3 0.084 13.2 0.2 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2004) RanGAP1_C PF07834.11 ORF87874 - 0.043 13.4 0.0 0.051 13.2 0.0 1.1 1 0 0 1 1 1 0 RanGAP1 C-terminal domain DUF4164 PF13747.6 ORF87806 - 6e-05 23.2 2.2 0.00015 22.0 1.5 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4164) zf-C4H2 PF10146.9 ORF87806 - 0.00061 20.2 4.8 0.00066 20.0 4.8 1.0 1 0 0 1 1 1 1 Zinc finger-containing protein Vps54_N PF10475.9 ORF87806 - 0.0044 16.4 2.1 0.0044 16.3 0.9 1.5 1 1 0 1 1 1 1 Vacuolar-sorting protein 54, of GARP complex DUF3552 PF12072.8 ORF87806 - 0.0061 16.0 2.2 0.0071 15.8 2.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) CENP-F_leu_zip PF10473.9 ORF87806 - 0.014 15.4 6.2 0.071 13.1 2.3 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cep57_CLD_2 PF14197.6 ORF87806 - 0.02 15.0 1.1 0.02 15.0 1.1 1.8 1 1 0 2 2 2 0 Centrosome localisation domain of PPC89 DUF5082 PF16888.5 ORF87806 - 0.024 14.9 6.8 0.17 12.2 0.5 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) FliJ PF02050.16 ORF87806 - 0.026 14.7 4.8 0.035 14.3 4.8 1.2 1 0 0 1 1 1 0 Flagellar FliJ protein HlyE PF06109.13 ORF87806 - 0.046 13.0 2.4 0.09 12.1 2.4 1.5 1 1 0 1 1 1 0 Haemolysin E (HlyE) DUF3053 PF11254.8 ORF87806 - 0.057 13.0 5.8 0.23 11.0 5.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3053) OmpH PF03938.14 ORF87806 - 0.072 13.4 5.1 0.11 12.9 5.1 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2993 PF11209.8 ORF87806 - 0.091 13.0 0.0 0.11 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2993) TMPIT PF07851.13 ORF87806 - 0.1 11.9 2.6 0.12 11.6 2.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein Tup_N PF08581.10 ORF87806 - 0.25 11.6 5.1 0.22 11.8 2.1 2.0 1 1 1 2 2 2 0 Tup N-terminal DUF4200 PF13863.6 ORF87806 - 0.26 11.7 5.0 0.58 10.6 1.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) ABC_tran_CTD PF16326.5 ORF87806 - 0.44 10.8 3.9 6.4 7.1 3.3 2.4 1 1 0 1 1 1 0 ABC transporter C-terminal domain BRE1 PF08647.11 ORF87806 - 0.49 10.5 8.0 0.16 12.0 3.1 1.9 1 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase DUF1664 PF07889.12 ORF87806 - 0.77 9.8 4.7 2.3 8.3 1.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DASH_Dam1 PF08653.10 ORF87806 - 2.4 8.0 6.7 14 5.5 0.9 2.6 2 2 0 2 2 2 0 DASH complex subunit Dam1 Acid_PPase PF12689.7 ORF87745 - 1.5e-19 70.5 0.0 1.9e-19 70.1 0.0 1.1 1 0 0 1 1 1 1 Acid Phosphatase RRM_1 PF00076.22 ORF87736 - 2.3e-13 49.7 0.1 3.4e-13 49.2 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) E1_dh PF00676.20 ORF87382 - 1.5e-16 60.3 0.7 1.7e-16 60.0 0.7 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component Kazal_2 PF07648.15 ORF86941 - 0.072 13.2 1.5 0.46 10.6 0.3 2.2 2 0 0 2 2 2 0 Kazal-type serine protease inhibitor domain Phage_sheath_1C PF17482.2 ORF86213 - 0.14 12.2 0.0 0.21 11.5 0.0 1.4 1 1 0 1 1 1 0 Phage tail sheath C-terminal domain FCD PF07729.12 ORF85428 - 1.2e-14 54.8 6.1 1.3e-14 54.7 6.1 1.0 1 0 0 1 1 1 1 FCD domain Pox_A32 PF04665.12 ORF85428 - 0.034 13.6 0.0 0.039 13.4 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A32 protein GM_CSF PF01109.17 ORF85248 - 0.034 14.3 0.0 0.043 14.0 0.0 1.3 1 0 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor Gas_vesicle PF00741.18 ORF84696 - 0.16 12.1 0.6 0.34 11.1 0.4 1.6 1 1 0 1 1 1 0 Gas vesicle protein SieB PF14163.6 ORF84696 - 2 7.9 4.9 2.7 7.5 4.9 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B TMEM132D_C PF15706.5 ORF84670 - 0.2 11.4 1.9 0.31 10.8 1.9 1.6 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF3985 PF13153.6 ORF84520 - 0.05 13.6 2.0 0.05 13.6 2.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3985) ORC5_C PF14630.6 ORF84268 - 0.1 12.1 0.5 0.12 11.9 0.5 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus MR_MLE_C PF13378.6 ORF84052 - 6.7e-09 35.6 0.0 7.7e-09 35.4 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like Methyltransf_32 PF13679.6 ORF83310 - 0.019 14.9 0.1 1.1 9.2 0.0 2.0 1 1 1 2 2 2 0 Methyltransferase domain RINGv PF12906.7 ORF83035 - 0.068 13.3 3.4 0.54 10.4 1.0 2.2 2 0 0 2 2 2 0 RING-variant domain TRP_2 PF08344.11 ORF82925 - 0.046 13.9 0.4 0.14 12.4 0.1 2.0 1 1 1 2 2 2 0 Transient receptor ion channel II DUF1129 PF06570.11 ORF82696 - 0.072 12.6 0.9 0.09 12.3 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3684 PF12449.8 ORF8239 - 0.26 9.0 0.0 0.28 8.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3684) APC_r PF05923.12 ORF81888 - 0.011 15.4 0.0 0.024 14.3 0.0 1.5 1 0 0 1 1 1 0 APC repeat Endotoxin_C2 PF18449.1 ORF81361 - 0.087 13.2 0.6 0.16 12.3 0.6 1.4 1 0 0 1 1 1 0 Delta endotoxin DUF4790 PF16037.5 ORF80912 - 0.33 11.4 1.7 2.1 8.9 0.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4790) Esterase_phd PF10503.9 ORF80680 - 0.0032 17.0 0.0 0.0034 16.9 0.0 1.1 1 0 0 1 1 1 1 Esterase PHB depolymerase DUF3298 PF11738.8 ORF80359 - 0.0058 17.6 0.1 0.011 16.8 0.0 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF3298) Exonuc_X-T_C PF08411.10 ORF80359 - 0.0079 15.4 0.0 0.0095 15.1 0.0 1.0 1 0 0 1 1 1 1 Exonuclease C-terminal WD40 PF00400.32 ORF79571 - 2.7e-21 75.5 1.7 1.9e-08 34.8 0.0 3.0 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF79571 - 3.6e-10 40.0 0.0 7e-06 26.3 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF79571 - 4.1e-05 22.7 0.2 0.053 12.5 0.1 2.0 1 1 1 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF79571 - 0.0005 18.9 0.0 0.016 13.8 0.0 2.0 1 1 1 2 2 2 2 Nucleoporin Nup120/160 eIF2A PF08662.11 ORF79571 - 0.00071 19.5 0.1 0.00086 19.2 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 ORF79571 - 0.011 15.1 0.0 0.094 12.0 0.1 1.9 1 1 1 2 2 2 0 WD40-like domain DUF2632 PF10943.8 ORF7898 - 0.15 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2632) ADH_zinc_N_2 PF13602.6 ORF78696 - 3.1e-11 44.4 0.0 3.5e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF3631 PF12307.8 ORF78696 - 0.14 12.4 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3631) UPF0160 PF03690.13 ORF78651 - 2.8e-20 73.2 0.0 3.6e-20 72.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0160) PKI PF02827.16 ORF78651 - 0.00059 20.0 1.3 0.00083 19.5 1.3 1.3 1 0 0 1 1 1 1 cAMP-dependent protein kinase inhibitor Rxt3 PF08642.10 ORF78651 - 0.019 15.7 0.5 0.025 15.3 0.5 1.2 1 0 0 1 1 1 0 Histone deacetylation protein Rxt3 DUF3244 PF11589.8 ORF76737 - 0.0091 16.1 0.1 0.011 15.8 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3244) NST1 PF13945.6 ORF7638 - 0.046 13.8 12.2 0.049 13.7 12.2 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator Protocadherin PF08374.11 ORF7638 - 0.081 12.9 7.4 0.095 12.7 7.4 1.1 1 0 0 1 1 1 0 Protocadherin Tom22 PF04281.13 ORF7638 - 0.17 11.7 7.2 0.17 11.7 6.6 1.3 1 1 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 DUF1387 PF07139.11 ORF7638 - 0.32 10.7 13.7 0.38 10.5 13.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1387) Tho2 PF11262.8 ORF7638 - 0.38 9.9 6.6 0.38 9.9 6.6 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 BSP_II PF05432.11 ORF7638 - 0.51 10.0 11.0 0.52 10.0 11.0 1.0 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) DUF3464 PF11947.8 ORF7638 - 4.4 7.0 8.2 5.5 6.7 8.2 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 MutS_V PF00488.21 ORF76320 - 9.2e-07 29.1 0.0 1.2e-06 28.7 0.0 1.1 1 0 0 1 1 1 1 MutS domain V CASP_C PF08172.12 ORF76320 - 0.0012 18.2 0.3 0.0012 18.2 0.3 1.1 1 0 0 1 1 1 1 CASP C terminal Rhabdo_M1 PF03342.13 ORF75813 - 0.051 12.9 0.2 0.056 12.8 0.2 1.2 1 0 0 1 1 1 0 Rhabdovirus M1 matrix protein (M1 polymerase-associated protein) DUF4337 PF14235.6 ORF75159 - 1.8 8.7 5.5 2.2 8.3 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF1324 PF07038.11 ORF75119 - 0.058 13.6 0.2 0.095 12.9 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1324) Phage_term_smal PF05944.12 ORF74103 - 0.14 12.1 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Phage small terminase subunit Endotoxin_C2 PF18449.1 ORF72987 - 0.087 13.2 0.6 0.16 12.3 0.6 1.4 1 0 0 1 1 1 0 Delta endotoxin DUF4337 PF14235.6 ORF72159 - 1.8 8.7 5.5 2.2 8.3 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Tr-sialidase_C PF11052.8 ORF72043 - 0.13 12.4 4.5 0.26 11.4 4.5 1.5 1 0 0 1 1 1 0 Trans-sialidase of Trypanosoma hydrophobic C-terminal Abhydrolase_1 PF00561.20 ORF71853 - 0.02 14.5 0.1 0.028 14.1 0.1 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Thg1C PF14413.6 ORF71853 - 0.043 14.0 0.2 0.088 13.0 0.1 1.5 1 1 1 2 2 2 0 Thg1 C terminal domain Cytochrom_C1 PF02167.15 ORF71853 - 0.058 13.1 0.0 0.062 13.0 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C1 family DUF1684 PF07920.11 ORF71853 - 0.069 13.4 0.0 0.075 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1684) TMEM132D_C PF15706.5 ORF70880 - 0.11 12.3 0.7 0.13 12.0 0.7 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF3270 PF11674.8 ORF70880 - 8 6.7 15.1 5.8 7.2 13.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) UPF0113 PF03657.13 ORF70504 - 0.024 14.9 0.0 0.031 14.6 0.0 1.4 1 0 0 1 1 1 0 UPF0113 PUA domain LcrG PF07216.12 ORF70384 - 0.052 13.5 0.1 0.92 9.5 0.0 2.5 2 1 0 2 2 2 0 LcrG protein NDUFB11 PF17250.2 ORF70007 - 0.01 16.4 1.0 0.012 16.2 1.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase 11 kDa subunit DUF2231 PF09990.9 ORF69833 - 0.082 13.3 0.1 0.1 13.1 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Spb1_C PF07780.12 ORF6970 - 1.4e-13 51.0 14.5 1.8e-13 50.6 14.5 1.2 1 0 0 1 1 1 1 Spb1 C-terminal domain DBR1 PF05011.13 ORF6970 - 0.03 14.7 0.9 0.035 14.5 0.9 1.2 1 0 0 1 1 1 0 Lariat debranching enzyme, C-terminal domain LmjF365940-deam PF14421.6 ORF69425 - 0.086 12.4 0.6 0.088 12.4 0.6 1.1 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases DUF3918 PF13056.6 ORF69342 - 0.072 12.7 0.4 0.41 10.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) PolyA_pol_arg_C PF12626.7 ORF68624 - 0.023 14.7 0.6 0.042 13.9 0.5 1.4 1 1 0 1 1 1 0 Polymerase A arginine-rich C-terminus TMEM126 PF07114.11 ORF68624 - 0.073 12.5 0.6 0.086 12.2 0.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 126 FeoB_associated PF12669.7 ORF68594 - 0.2 12.1 3.8 4.1 7.9 0.1 2.3 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein HTH_8 PF02954.19 ORF68214 - 2.6e-14 52.7 0.4 3.8e-14 52.2 0.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family Phage_NinH PF06322.11 ORF68214 - 0.00053 19.8 0.1 0.0011 18.8 0.1 1.5 1 0 0 1 1 1 1 Phage NinH protein DUF3333 PF11812.8 ORF68214 - 0.025 14.8 0.3 0.029 14.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) HTH_30 PF13556.6 ORF68214 - 0.1 12.4 0.1 0.26 11.1 0.0 1.7 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Inhibitor_I24 PF10465.9 ORF68214 - 0.14 12.1 0.1 0.17 11.9 0.1 1.1 1 0 0 1 1 1 0 PinA peptidase inhibitor PPDK_N PF01326.19 ORF67698 - 0.0032 16.8 0.0 0.0032 16.8 0.0 1.0 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NAD-GH PF10712.9 ORF66928 - 0.0034 15.9 0.0 0.0039 15.7 0.0 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Methyltransf_32 PF13679.6 ORF66523 - 0.065 13.2 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Mso1_Sec1_bdg PF14475.6 ORF65876 - 0.021 14.4 0.2 0.041 13.5 0.2 1.5 1 0 0 1 1 1 0 Sec1-binding region of Mso1 DUF1644 PF07800.12 ORF65675 - 0.11 12.6 4.2 0.082 13.0 3.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1644) EKAL PF17986.1 ORF65675 - 0.2 11.7 2.4 0.4 10.8 0.5 2.1 2 0 0 2 2 2 0 EMP3-KAHRP-like N-terminal domain RasGAP_C PF03836.15 ORF65065 - 0.013 15.7 6.5 0.013 15.7 6.5 2.1 1 1 1 2 2 2 0 RasGAP C-terminus DUF5595 PF18077.1 ORF65065 - 0.013 15.5 9.5 0.051 13.7 1.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5595) KxDL PF10241.9 ORF65065 - 0.019 15.3 12.3 0.035 14.4 3.5 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein Lebercilin PF15619.6 ORF65065 - 0.026 14.2 5.9 0.026 14.2 5.9 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease bZIP_2 PF07716.15 ORF65065 - 0.031 14.3 1.1 0.031 14.3 1.1 2.8 2 1 0 2 2 2 0 Basic region leucine zipper Prefoldin_3 PF13758.6 ORF65065 - 0.046 13.8 8.0 0.054 13.6 6.0 1.8 1 1 1 2 2 2 0 Prefoldin subunit DUF5454 PF17535.2 ORF65065 - 0.086 12.2 10.0 0.092 12.1 10.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5454) Cnn_1N PF07989.11 ORF65065 - 0.097 12.8 15.2 0.12 12.5 9.7 2.2 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Spc7 PF08317.11 ORF65065 - 0.15 10.9 17.4 0.17 10.7 17.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein PAT1 PF09770.9 ORF65065 - 0.16 10.2 6.8 0.16 10.2 6.8 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 APG6_N PF17675.1 ORF65065 - 0.17 12.4 17.8 0.15 12.5 5.2 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region PRKG1_interact PF15898.5 ORF65065 - 0.19 12.7 13.8 0.11 13.5 12.0 1.5 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Cep57_MT_bd PF06657.13 ORF65065 - 0.21 12.1 9.3 3 8.3 1.0 2.3 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 TolA_bind_tri PF16331.5 ORF65065 - 0.26 11.4 8.0 0.73 10.0 4.8 2.6 1 1 1 2 2 2 0 TolA binding protein trimerisation Peptidase_S46 PF10459.9 ORF65065 - 0.32 9.6 9.4 0.35 9.5 9.4 1.0 1 0 0 1 1 1 0 Peptidase S46 FlaC_arch PF05377.11 ORF65065 - 0.52 10.8 8.5 1.1 9.7 1.9 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Dict-STAT-coil PF09267.10 ORF65065 - 0.56 10.6 8.6 0.6 10.5 0.9 2.4 1 1 1 2 2 2 0 Dictyostelium STAT, coiled coil K-box PF01486.17 ORF65065 - 0.67 10.2 18.0 0.14 12.4 14.1 1.9 2 1 0 2 2 1 0 K-box region DUF2203 PF09969.9 ORF65065 - 0.71 10.6 5.7 0.52 11.0 4.2 1.5 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) TMPIT PF07851.13 ORF65065 - 0.75 9.0 15.3 0.91 8.7 15.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF1664 PF07889.12 ORF65065 - 0.92 9.6 8.1 1.8 8.6 2.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Uso1_p115_C PF04871.13 ORF65065 - 1 9.8 18.0 2.2 8.6 18.0 1.5 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Jnk-SapK_ap_N PF09744.9 ORF65065 - 1.1 9.5 16.8 2.7 8.2 16.8 1.6 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 OmpH PF03938.14 ORF65065 - 1.2 9.5 15.6 2.7 8.4 15.6 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4446 PF14584.6 ORF65065 - 1.4 8.9 12.0 0.26 11.3 5.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DivIC PF04977.15 ORF65065 - 1.5 8.6 14.8 0.17 11.7 3.0 2.4 1 1 1 2 2 2 0 Septum formation initiator DUF334 PF03904.13 ORF65065 - 1.6 8.2 10.0 1.7 8.1 10.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) She9_MDM33 PF05546.11 ORF65065 - 1.7 8.4 13.5 1.8 8.3 13.5 1.0 1 0 0 1 1 1 0 She9 / Mdm33 family CHIP_TPR_N PF18391.1 ORF65065 - 2.3 9.0 15.6 0.33 11.7 1.7 2.1 1 1 1 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain DUF16 PF01519.16 ORF65065 - 2.3 8.7 12.2 5.8 7.5 12.2 1.7 1 1 0 1 1 1 0 Protein of unknown function DUF16 GrpE PF01025.19 ORF65065 - 2.3 7.8 18.4 1 9.0 4.7 2.0 1 1 1 2 2 2 0 GrpE ZapB PF06005.12 ORF65065 - 2.5 8.6 16.8 9.1e+02 0.4 16.8 2.3 1 1 0 1 1 1 0 Cell division protein ZapB YabA PF06156.13 ORF65065 - 2.5 8.8 13.0 1.2 9.8 8.4 2.0 1 1 1 2 2 2 0 Initiation control protein YabA Med21 PF11221.8 ORF65065 - 3 8.1 12.4 0.41 10.9 1.1 2.1 1 1 0 2 2 2 0 Subunit 21 of Mediator complex VIT1 PF01988.19 ORF65065 - 4.9 7.0 5.8 7.1 6.4 5.8 1.4 1 1 0 1 1 1 0 VIT family CENP-H PF05837.12 ORF65065 - 5.3 7.5 16.0 4.9 7.6 8.1 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Exonuc_VII_L PF02601.15 ORF65065 - 5.3 6.5 11.6 6.1 6.3 11.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Swi5 PF07061.11 ORF65065 - 5.6 7.1 14.7 2.2 8.4 3.5 2.1 1 1 1 2 2 2 0 Swi5 DUF724 PF05266.14 ORF65065 - 7.7 6.3 14.6 9 6.1 14.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) MqsR_toxin PF15723.5 ORF64890 - 2.1e-32 111.3 0.0 2.3e-32 111.2 0.0 1.0 1 0 0 1 1 1 1 Motility quorum-sensing regulator, toxin of MqsA Sugar_tr PF00083.24 ORF64711 - 1.4e-05 24.2 0.0 1.5e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter IBR PF01485.21 ORF642 - 0.076 13.3 14.0 0.65 10.3 14.0 2.1 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain Ribosomal_L11 PF00298.19 ORF63991 - 3e-09 37.2 0.0 4.7e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain TMP_2 PF06791.13 ORF63991 - 0.076 12.7 0.0 0.093 12.4 0.0 1.1 1 0 0 1 1 1 0 Prophage tail length tape measure protein DUF202 PF02656.15 ORF6397 - 0.015 15.7 0.2 0.021 15.3 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF202) DUF2964 PF11177.8 ORF6397 - 0.047 13.9 2.6 0.078 13.2 2.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2964) DUF4077 PF13295.6 ORF6397 - 0.057 13.3 0.1 0.064 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) DUF3098 PF11297.8 ORF6397 - 0.09 12.4 1.8 5.2 6.7 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) OAD_gamma PF04277.13 ORF6397 - 0.26 11.9 0.0 0.26 11.9 0.0 1.8 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain DUF2157 PF09925.9 ORF6397 - 7.4 6.3 8.9 5.4 6.8 1.8 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) Lustrin_cystein PF14625.6 ORF63861 - 0.68 10.4 9.9 0.21 12.0 6.1 2.3 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain Ribosomal_L37ae PF01780.19 ORF63384 - 5e-30 103.4 2.7 5.8e-30 103.2 2.7 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Ank_4 PF13637.6 ORF63249 - 8.3e-05 23.1 0.0 0.00027 21.4 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (many copies) TFIIE-A_C PF11521.8 ORF63249 - 0.15 12.3 2.9 0.19 12.1 2.9 1.2 1 0 0 1 1 1 0 C-terminal general transcription factor TFIIE alpha YfhO PF09586.10 ORF63249 - 0.21 9.8 0.5 0.22 9.7 0.5 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Orthopox_A36R PF05950.11 ORF63249 - 0.41 10.8 5.3 0.38 10.9 5.3 1.1 1 0 0 1 1 1 0 Orthopoxvirus A36R protein PP2C PF00481.21 ORF6244 - 7e-13 48.8 0.1 7.9e-13 48.6 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF6244 - 0.0007 19.6 0.1 0.00078 19.4 0.1 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) IQ PF00612.27 ORF62279 - 4.9e-05 22.8 11.4 0.0007 19.2 3.2 2.9 3 0 0 3 3 3 2 IQ calmodulin-binding motif Ribosomal_L18A PF01775.17 ORF62279 - 0.051 13.7 0.6 0.058 13.5 0.6 1.1 1 0 0 1 1 1 0 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A DUF1064 PF06356.11 ORF61096 - 0.024 15.0 0.1 0.026 14.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1064) HTH_3 PF01381.22 ORF60948 - 0.027 14.5 0.0 0.042 13.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix Ribosomal_L37ae PF01780.19 ORF60840 - 1.7e-34 117.8 10.3 1.9e-34 117.6 10.3 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family zf-HC5HC2H PF13771.6 ORF60840 - 0.00076 19.7 0.7 0.00082 19.6 0.7 1.2 1 0 0 1 1 1 1 PHD-like zinc-binding domain CEBP_ZZ PF16366.5 ORF60840 - 0.02 15.1 0.7 0.03 14.6 0.7 1.3 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-RING_13 PF17977.1 ORF60840 - 0.052 13.7 3.2 0.072 13.2 3.2 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 ORF60840 - 0.68 10.0 5.7 2.3 8.3 1.0 2.0 1 1 1 2 2 2 0 Transposase zinc-ribbon domain FUSC_2 PF13515.6 ORF60459 - 0.028 14.5 0.6 0.043 13.9 0.6 1.4 1 0 0 1 1 1 0 Fusaric acid resistance protein-like Ser_hydrolase PF06821.13 ORF60116 - 0.021 14.7 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Serine hydrolase Tudor_4 PF18358.1 ORF59851 - 0.022 14.4 0.0 0.036 13.7 0.0 1.3 1 0 0 1 1 1 0 Histone methyltransferase Tudor domain Fib_alpha PF08702.10 ORF59554 - 0.83 9.8 5.2 0.99 9.6 5.2 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family FAM165 PF14981.6 ORF58557 - 0.13 12.1 0.1 0.2 11.5 0.1 1.3 1 0 0 1 1 1 0 FAM165 family SH3_1 PF00018.28 ORF58499 - 0.039 13.6 0.4 0.25 11.0 0.1 2.1 2 0 0 2 2 2 0 SH3 domain Peptidase_A22B PF04258.13 ORF58181 - 4.5e-25 88.8 7.1 4.9e-25 88.6 7.1 1.0 1 0 0 1 1 1 1 Signal peptide peptidase Sushi PF00084.20 ORF57936 - 0.0036 17.9 0.3 0.0053 17.3 0.3 1.3 1 0 0 1 1 1 1 Sushi repeat (SCR repeat) NUMOD1 PF07453.13 ORF57011 - 0.027 14.7 0.0 0.053 13.8 0.0 1.5 1 0 0 1 1 1 0 NUMOD1 domain GM_CSF PF01109.17 ORF56853 - 0.034 14.3 0.0 0.043 14.0 0.0 1.3 1 0 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor ACCA PF03255.14 ORF5671 - 0.17 11.7 6.7 0.19 11.6 4.2 1.9 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Atg14 PF10186.9 ORF5671 - 0.52 9.3 15.0 2.3 7.2 15.0 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF5671 - 0.57 9.0 14.6 0.71 8.7 14.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein OmpH PF03938.14 ORF5671 - 0.62 10.4 19.5 0.92 9.8 19.5 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Phage_Mu_Gam PF07352.12 ORF5671 - 1.3 8.9 16.6 1.6 8.6 11.0 2.0 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein DHR10 PF18595.1 ORF5671 - 1.6 8.8 21.4 7.1 6.7 21.3 1.8 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain UPF0242 PF06785.11 ORF5671 - 2.2 8.4 16.9 7.8 6.6 14.8 1.8 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Tho2 PF11262.8 ORF5671 - 5.3 6.2 10.6 6 6.0 10.6 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF4407 PF14362.6 ORF5671 - 5.6 6.2 9.8 6.8 6.0 9.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) LrgB PF04172.16 ORF56166 - 1.7e-31 109.4 7.4 1.9e-31 109.2 7.4 1.0 1 0 0 1 1 1 1 LrgB-like family DUF4190 PF13828.6 ORF56166 - 3.4 7.5 19.7 0.18 11.6 6.9 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4190) DUF1129 PF06570.11 ORF56008 - 0.072 12.6 0.9 0.09 12.3 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF5301 PF17225.3 ORF55736 - 0.0086 16.5 1.9 0.011 16.2 1.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5300) DUF3244 PF11589.8 ORF55443 - 0.045 13.8 0.6 0.058 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3244) HATPase_c PF02518.26 ORF55271 - 1.3e-13 51.4 0.4 1.5e-13 51.3 0.4 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF55271 - 0.0088 15.9 0.0 0.01 15.6 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SNAP PF14938.6 ORF55178 - 4.3e-15 55.9 0.0 4.8e-15 55.7 0.0 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP Ribosomal_L37ae PF01780.19 ORF55117 - 5e-30 103.4 2.7 5.8e-30 103.2 2.7 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family YbjM PF11045.8 ORF55093 - 3.4e-36 124.0 6.2 3.7e-36 123.8 6.2 1.0 1 0 0 1 1 1 1 Putative inner membrane protein of Enterobacteriaceae 5TM-5TMR_LYT PF07694.12 ORF55093 - 0.035 13.6 0.7 0.039 13.5 0.7 1.1 1 0 0 1 1 1 0 5TMR of 5TMR-LYT Sdh5 PF03937.16 ORF54934 - 0.19 11.7 0.0 0.33 10.9 0.0 1.4 1 0 0 1 1 1 0 Flavinator of succinate dehydrogenase Hid1 PF12722.7 ORF54597 - 4e-05 22.0 0.0 4.3e-05 21.9 0.0 1.0 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein Dymeclin PF09742.9 ORF54597 - 0.018 13.5 0.0 0.019 13.4 0.0 1.0 1 0 0 1 1 1 0 Dyggve-Melchior-Clausen syndrome protein Allexi_40kDa PF05549.11 ORF53584 - 0.29 10.6 12.5 0.38 10.2 12.5 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF3347 PF11827.8 ORF53584 - 2.1 8.5 13.2 2 8.6 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) PCRF PF03462.18 ORF53584 - 2.3 8.1 16.0 5.3 6.9 15.9 1.6 1 1 0 1 1 1 0 PCRF domain T2SSM PF04612.12 ORF53584 - 2.3 8.2 19.0 9.7 6.2 6.3 2.2 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein M HBM PF16591.5 ORF53584 - 3.3 7.0 25.7 0.99 8.8 10.9 2.0 1 1 1 2 2 2 0 Helical bimodular sensor domain Lyase_8_N PF08124.11 ORF53584 - 4.4 6.1 10.3 5 6.0 10.3 1.1 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain tRNA-synt_His PF13393.6 ORF53584 - 5.6 6.1 12.4 8.6 5.5 12.4 1.3 1 1 0 1 1 1 0 Histidyl-tRNA synthetase Adaptin_binding PF10199.9 ORF53584 - 8.3 7.0 18.5 11 6.6 18.5 1.3 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 TAFA PF12020.8 ORF5315 - 0.0054 17.2 0.3 0.0054 17.2 0.3 1.8 2 0 0 2 2 2 1 TAFA family CCT PF06203.14 ORF5286 - 7.6e-09 35.5 9.7 1.6e-08 34.5 9.7 1.5 1 0 0 1 1 1 1 CCT motif rve_2 PF13333.6 ORF5286 - 0.0024 18.0 0.8 0.0031 17.7 0.3 1.6 2 0 0 2 2 2 1 Integrase core domain Lectin_N PF03954.14 ORF52825 - 0.041 13.6 2.9 0.052 13.3 2.9 1.2 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain CAC1F_C PF16885.5 ORF52825 - 0.52 9.9 8.3 0.53 9.9 8.3 1.0 1 0 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term TraD_N PF12615.8 ORF52266 - 0.061 14.1 0.2 0.071 13.9 0.2 1.1 1 0 0 1 1 1 0 F sex factor protein N terminal Aa_trans PF01490.18 ORF52074 - 6.2e-07 28.5 0.2 6.6e-07 28.4 0.2 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF52074 - 0.024 13.7 0.7 0.028 13.5 0.7 1.0 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family Nup188_C PF18378.1 ORF52074 - 0.069 12.0 0.0 0.071 11.9 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain Ocular_alb PF02101.15 ORF50982 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein DUF5096 PF17019.5 ORF5095 - 0.03 14.1 1.4 0.042 13.6 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5096) Lin0512_fam PF09585.10 ORF50819 - 0.11 12.6 0.0 0.19 11.8 0.0 1.6 1 1 0 1 1 1 0 Conserved hypothetical protein (Lin0512_fam) CCDC66 PF15236.6 ORF50375 - 0.00052 19.9 18.2 0.00065 19.6 18.2 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 66 MCD PF05292.11 ORF50375 - 0.22 11.1 3.6 0.26 10.8 3.6 1.0 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase C-terminal domain ORC3_N PF07034.11 ORF50375 - 0.53 9.3 4.3 0.56 9.2 4.3 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 3 N-terminus U79_P34 PF03064.16 ORF50375 - 0.62 9.4 11.6 0.69 9.2 11.6 1.0 1 0 0 1 1 1 0 HSV U79 / HCMV P34 DUF2407_C PF13373.6 ORF50375 - 0.99 9.6 4.1 1.2 9.3 4.1 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain DUF5401 PF17380.2 ORF50375 - 4.2 5.3 17.3 5.1 5.0 17.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Ureide_permease PF07168.11 ORF50375 - 5.2 5.7 5.6 6.2 5.5 5.6 1.0 1 0 0 1 1 1 0 Ureide permease Phage_sheath_1C PF17482.2 ORF50368 - 0.14 12.2 0.0 0.21 11.5 0.0 1.4 1 1 0 1 1 1 0 Phage tail sheath C-terminal domain SNARE PF05739.19 ORF5028 - 2.1e-08 34.1 0.6 2.1e-08 34.1 0.6 2.5 1 1 1 2 2 2 1 SNARE domain Synaptobrevin PF00957.21 ORF5028 - 0.0024 17.6 0.3 0.0034 17.1 0.3 1.2 1 0 0 1 1 1 1 Synaptobrevin BatD PF13584.6 ORF5028 - 0.012 14.5 0.1 0.012 14.4 0.1 1.0 1 0 0 1 1 1 0 Oxygen tolerance DUF5383 PF17355.2 ORF5028 - 0.012 16.0 0.1 0.014 15.8 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Amnionless PF14828.6 ORF5028 - 0.02 13.8 0.6 0.022 13.6 0.6 1.0 1 0 0 1 1 1 0 Amnionless Orf78 PF06024.12 ORF5028 - 0.041 14.2 0.1 0.052 13.9 0.1 1.1 1 0 0 1 1 1 0 Orf78 (ac78) DUF4191 PF13829.6 ORF5028 - 0.13 11.6 0.2 0.19 11.1 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) ODV-E18 PF10717.9 ORF5028 - 0.33 10.8 2.3 0.34 10.8 1.3 1.6 1 1 1 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 DOMON PF03351.17 ORF49421 - 0.13 12.5 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 DOMON domain DUF5592 PF17332.2 ORF49304 - 0.51 10.9 5.6 0.46 11.1 4.3 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5592) FAM165 PF14981.6 ORF4757 - 0.13 12.1 0.1 0.2 11.5 0.1 1.3 1 0 0 1 1 1 0 FAM165 family ADH_zinc_N_2 PF13602.6 ORF46820 - 3.1e-11 44.4 0.0 3.5e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF3631 PF12307.8 ORF46820 - 0.14 12.4 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3631) FB_lectin PF07367.11 ORF46404 - 0.15 12.0 1.1 0.19 11.7 1.1 1.1 1 0 0 1 1 1 0 Fungal fruit body lectin DUF1439 PF07273.12 ORF45653 - 0.015 15.1 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1439) Ribosomal_L2_C PF03947.18 ORF45600 - 0.0029 17.8 0.0 0.0042 17.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Acetyltransf_1 PF00583.25 ORF44819 - 2.2e-17 63.4 0.0 2.7e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF44819 - 3.1e-14 53.0 0.0 3.6e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF44819 - 1e-13 51.5 0.0 1.3e-13 51.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF44819 - 1.8e-12 47.1 0.0 2.2e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 FR47-like protein GNAT_acetyltran PF12746.7 ORF44819 - 2e-07 30.8 0.0 2.3e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_4 PF13420.7 ORF44819 - 2.4e-07 31.0 0.0 2.7e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF44819 - 4.2e-06 26.8 0.0 5.2e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF44819 - 0.00013 21.6 0.0 0.00016 21.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF44819 - 0.00019 22.1 0.0 0.00023 21.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 ORF44819 - 0.00052 19.5 0.0 0.0013 18.3 0.0 1.6 1 1 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_6 PF13480.7 ORF44819 - 0.0016 18.6 0.0 0.0018 18.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF44819 - 0.0029 17.7 0.0 0.0047 17.0 0.0 1.4 1 1 0 1 1 1 1 GCN5-related N-acetyl-transferase GNAT_acetyltr_2 PF13718.6 ORF44819 - 0.021 14.2 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase 2 Nudix_hydro PF18290.1 ORF44819 - 0.031 14.3 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 Nudix hydrolase domain FlgO PF17680.1 ORF44819 - 0.048 13.4 0.0 0.057 13.2 0.0 1.2 1 0 0 1 1 1 0 FlgO protein UCH PF00443.29 ORF4481 - 9.1e-14 51.6 0.4 1e-13 51.4 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF4481 - 4.6e-07 29.7 0.2 5.1e-07 29.6 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase GspL_C PF12693.7 ORF44556 - 0.031 14.1 0.7 0.037 13.9 0.7 1.1 1 0 0 1 1 1 0 GspL periplasmic domain PCMT PF01135.19 ORF44363 - 7.4e-25 87.9 0.0 8.3e-25 87.8 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF4005 PF13178.6 ORF44260 - 0.031 14.9 0.0 0.047 14.3 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4005) Aa_trans PF01490.18 ORF44232 - 0.002 16.9 13.0 0.0024 16.7 13.0 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Glutaredoxin PF00462.24 ORF44228 - 1.8e-15 56.9 0.0 2.3e-15 56.5 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 ORF44228 - 0.0004 20.7 0.1 0.00044 20.6 0.1 1.3 1 1 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_2 PF13098.6 ORF44228 - 0.0012 19.3 0.1 0.0015 19.0 0.1 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain DSBA PF01323.20 ORF44228 - 0.012 15.4 0.0 0.033 14.0 0.0 1.7 1 1 1 2 2 2 0 DSBA-like thioredoxin domain GST_N_3 PF13417.6 ORF44228 - 0.014 15.8 0.0 0.016 15.6 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin PF00085.20 ORF44228 - 0.025 14.6 0.0 0.029 14.4 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin Thioredoxin_3 PF13192.6 ORF44228 - 0.037 14.1 0.3 0.055 13.5 0.3 1.6 1 1 0 1 1 1 0 Thioredoxin domain Thioredoxin_4 PF13462.6 ORF44228 - 0.096 12.8 0.4 0.95 9.6 0.3 2.0 1 1 1 2 2 2 0 Thioredoxin TRF PF08558.10 ORF43683 - 0.22 11.1 1.9 0.31 10.6 1.9 1.1 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) Erythro-docking PF09277.11 ORF43660 - 0.033 14.1 0.1 0.033 14.1 0.1 1.6 2 0 0 2 2 2 0 Erythronolide synthase, docking DUF5365 PF17326.2 ORF43498 - 0.0063 16.9 1.7 0.0075 16.7 1.7 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5365) RNR_Alpha PF17975.1 ORF43498 - 0.0068 16.9 1.0 0.0077 16.7 1.0 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase alpha domain KIAA1430 PF13879.6 ORF43498 - 0.028 15.2 0.8 0.028 15.2 0.8 2.1 1 1 1 2 2 2 0 KIAA1430 homologue Allexi_40kDa PF05549.11 ORF43498 - 0.14 11.7 2.7 0.15 11.6 2.7 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein DOMON PF03351.17 ORF42666 - 0.13 12.5 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 DOMON domain SsgA PF04686.12 ORF41851 - 0.012 15.6 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA Mtd_N PF18454.1 ORF41804 - 0.0098 15.9 0.1 0.018 15.1 0.1 1.4 1 0 0 1 1 1 1 Major tropism determinant N-terminal domain DHHC PF01529.20 ORF41617 - 0.00015 21.9 0.1 0.00023 21.3 0.1 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase Sec1 PF00995.23 ORF41339 - 4.2e-07 29.6 0.0 5e-07 29.3 0.0 1.0 1 0 0 1 1 1 1 Sec1 family UPF0180 PF03698.13 ORF41339 - 0.0049 17.0 0.8 0.0084 16.3 0.8 1.4 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0180) Adeno_E3_CR1 PF02440.15 ORF41162 - 0.19 11.5 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 Ras PF00071.22 ORF39869 - 4.7e-25 88.1 0.1 5.7e-25 87.8 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF39869 - 1.3e-22 80.3 0.1 1.6e-22 80.0 0.1 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Gtr1_RagA PF04670.12 ORF39869 - 1.8e-06 27.5 0.1 2.4e-06 27.1 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Arf PF00025.21 ORF39869 - 7.7e-06 25.5 0.0 8.6e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF39869 - 0.0002 21.4 0.0 0.00026 21.1 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF39869 - 0.0014 18.2 0.0 0.0016 18.0 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF39869 - 0.005 16.8 0.0 0.0051 16.7 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF39869 - 0.016 14.9 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 ORF39869 - 0.017 15.6 0.0 0.021 15.4 0.0 1.2 1 0 0 1 1 1 0 ABC transporter NB-ARC PF00931.22 ORF39869 - 0.019 14.2 0.2 0.019 14.1 0.2 1.1 1 0 0 1 1 1 0 NB-ARC domain DAP3 PF10236.9 ORF39869 - 0.021 14.0 0.0 0.024 13.8 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 Septin PF00735.18 ORF39869 - 0.023 14.0 0.1 0.027 13.8 0.1 1.2 1 0 0 1 1 1 0 Septin Sigma54_activat PF00158.26 ORF39869 - 0.037 13.7 0.0 0.042 13.6 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain NACHT PF05729.12 ORF39869 - 0.038 13.9 0.0 0.047 13.6 0.0 1.2 1 0 0 1 1 1 0 NACHT domain AAA_16 PF13191.6 ORF39869 - 0.043 14.2 0.0 0.043 14.2 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 ORF39869 - 0.053 13.8 0.0 0.056 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain MFS_1 PF07690.16 ORF39851 - 4.7e-08 32.4 2.1 5.1e-08 32.2 2.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRP_2 PF08344.11 ORF398 - 0.046 13.9 0.4 0.14 12.4 0.1 2.0 1 1 1 2 2 2 0 Transient receptor ion channel II Allexi_40kDa PF05549.11 ORF38877 - 0.29 10.6 12.5 0.38 10.2 12.5 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF3347 PF11827.8 ORF38877 - 2.1 8.5 13.2 2 8.6 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) PCRF PF03462.18 ORF38877 - 2.3 8.1 16.0 5.3 6.9 15.9 1.6 1 1 0 1 1 1 0 PCRF domain T2SSM PF04612.12 ORF38877 - 2.3 8.2 19.0 9.7 6.2 6.3 2.2 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein M HBM PF16591.5 ORF38877 - 3.3 7.0 25.7 0.99 8.8 10.9 2.0 1 1 1 2 2 2 0 Helical bimodular sensor domain Lyase_8_N PF08124.11 ORF38877 - 4.4 6.1 10.3 5 6.0 10.3 1.1 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain tRNA-synt_His PF13393.6 ORF38877 - 5.6 6.1 12.4 8.6 5.5 12.4 1.3 1 1 0 1 1 1 0 Histidyl-tRNA synthetase Adaptin_binding PF10199.9 ORF38877 - 8.3 7.0 18.5 11 6.6 18.5 1.3 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Glycogen_syn PF05693.13 ORF38529 - 0.26 9.8 0.0 0.31 9.5 0.0 1.0 1 0 0 1 1 1 0 Glycogen synthase ACP PF06857.11 ORF38227 - 1.7e-28 98.7 0.1 1.9e-28 98.5 0.1 1.0 1 0 0 1 1 1 1 Malonate decarboxylase delta subunit (MdcD) DUF1697 PF08002.11 ORF38227 - 0.15 12.5 0.0 0.22 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1697) KinB_sensor PF16767.5 ORF37725 - 0.052 14.0 0.1 0.056 13.9 0.1 1.2 1 0 0 1 1 1 0 Sensor domain of alginate biosynthesis sensor protein KinB zf-RING_2 PF13639.6 ORF3760 - 1.1e-08 35.2 2.4 2.2e-08 34.3 2.4 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF3760 - 2.5e-07 30.4 2.0 4.6e-07 29.6 2.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF3760 - 3.3e-07 30.5 3.5 7.3e-07 29.4 3.5 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF3760 - 6.3e-07 29.3 1.6 1.3e-06 28.3 1.6 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF3760 - 2.2e-06 27.3 6.1 3.2e-06 26.7 3.7 2.2 2 0 0 2 2 2 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF3760 - 0.00011 21.8 1.8 0.00018 21.0 1.8 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF3760 - 0.00028 20.9 0.8 0.00037 20.5 0.8 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF3760 - 0.00032 20.5 2.5 0.00071 19.4 2.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF3760 - 0.00069 19.5 2.3 0.0013 18.7 2.3 1.5 1 0 0 1 1 1 1 zinc-RING finger domain Zf_RING PF16744.5 ORF3760 - 0.0046 17.0 2.6 0.0099 16.0 2.5 1.6 1 1 0 1 1 1 1 KIAA1045 RING finger zf-C3HC4_3 PF13920.6 ORF3760 - 0.011 15.5 1.0 0.018 14.9 1.0 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 ORF3760 - 0.012 15.5 1.2 0.023 14.6 1.2 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 RINGv PF12906.7 ORF3760 - 0.026 14.7 3.2 0.059 13.5 3.2 1.6 1 0 0 1 1 1 0 RING-variant domain PHD PF00628.29 ORF3760 - 0.033 14.1 2.2 0.063 13.2 2.2 1.5 1 0 0 1 1 1 0 PHD-finger zf-C3HC4_4 PF15227.6 ORF3760 - 0.039 14.1 1.6 0.21 11.8 1.6 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 ORF3760 - 0.049 13.8 5.8 0.12 12.6 4.1 2.2 1 1 1 2 2 2 0 FANCL C-terminal domain Kinesin_assoc PF16183.5 ORF36915 - 0.00067 19.9 3.0 0.00078 19.6 3.0 1.0 1 0 0 1 1 1 1 Kinesin-associated PKcGMP_CC PF16808.5 ORF36915 - 0.017 14.9 5.8 1.6 8.6 0.8 2.5 1 1 1 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Tox-REase-2 PF15646.6 ORF36915 - 0.024 14.8 3.0 0.029 14.6 3.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 DUF3287 PF11690.8 ORF36915 - 0.025 14.3 1.0 0.028 14.1 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) Spc42p PF11544.8 ORF36915 - 0.039 14.0 1.5 0.039 14.0 1.5 1.8 1 1 1 2 2 2 0 Spindle pole body component Spc42p SlyX PF04102.12 ORF36915 - 0.085 13.5 1.8 0.16 12.6 1.8 1.5 1 0 0 1 1 1 0 SlyX His_binding PF02098.16 ORF36915 - 0.087 12.9 2.3 0.11 12.5 2.3 1.2 1 0 0 1 1 1 0 Tick histamine binding protein Hjc PF01870.18 ORF36915 - 0.1 12.6 0.8 0.15 12.1 0.8 1.5 1 1 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) eIF3_N PF09440.10 ORF36915 - 0.15 12.5 6.1 0.16 12.4 6.1 1.0 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain DivIC PF04977.15 ORF36915 - 0.17 11.7 3.4 0.22 11.3 1.6 1.9 1 1 1 2 2 2 0 Septum formation initiator Fib_alpha PF08702.10 ORF36915 - 0.34 11.1 7.9 0.41 10.8 7.9 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF36915 - 0.66 9.2 5.9 0.69 9.1 5.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein FAM76 PF16046.5 ORF36915 - 1 8.7 7.8 1.1 8.5 7.8 1.0 1 0 0 1 1 1 0 FAM76 protein TMF_DNA_bd PF12329.8 ORF36915 - 6 6.9 12.4 1.7 8.7 1.8 2.7 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding P-mevalo_kinase PF04275.14 ORF36348 - 8.5e-05 22.5 0.8 9.3e-05 22.4 0.8 1.1 1 0 0 1 1 1 1 Phosphomevalonate kinase DUF4420 PF14390.6 ORF36348 - 0.0012 18.1 0.1 0.0012 18.1 0.1 1.0 1 0 0 1 1 1 1 Putative PD-(D/E)XK family member, (DUF4420) Mt_ATP-synt_D PF05873.12 ORF36348 - 0.0051 16.7 2.1 0.0061 16.4 2.1 1.1 1 0 0 1 1 1 1 ATP synthase D chain, mitochondrial (ATP5H) HIP1_clath_bdg PF16515.5 ORF36348 - 0.028 15.0 2.0 0.035 14.7 2.0 1.1 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Cytochrom_B562 PF07361.11 ORF36348 - 0.034 14.8 0.2 0.04 14.6 0.2 1.1 1 0 0 1 1 1 0 Cytochrome b562 DUF2004 PF09406.10 ORF36348 - 0.039 14.3 0.4 0.05 13.9 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2004) WXG100 PF06013.12 ORF36348 - 0.045 14.0 0.8 0.61 10.4 0.8 2.0 1 1 0 1 1 1 0 Proteins of 100 residues with WXG GrpE PF01025.19 ORF36348 - 0.14 11.8 2.9 0.18 11.5 2.9 1.1 1 0 0 1 1 1 0 GrpE FapA PF03961.13 ORF36348 - 0.17 10.4 1.4 0.21 10.2 1.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A YtxH PF12732.7 ORF36348 - 0.39 11.3 3.6 0.55 10.8 3.6 1.3 1 0 0 1 1 1 0 YtxH-like protein SNAP PF14938.6 ORF36283 - 4.3e-15 55.9 0.0 4.8e-15 55.7 0.0 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP DUF4227 PF14004.6 ORF35843 - 0.14 12.1 0.5 0.23 11.5 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) SNF PF00209.18 ORF35726 - 7.7e-25 87.6 18.9 8.3e-25 87.5 18.9 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF728 PF05304.12 ORF34771 - 0.1 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) Ras PF00071.22 ORF34631 - 1.3e-10 41.1 0.0 1.4e-10 41.0 0.0 1.0 1 0 0 1 1 1 1 Ras family Methyltransf_15 PF09445.10 ORF34046 - 6.8e-05 22.5 0.1 7.7e-05 22.3 0.1 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RabGAP-TBC PF00566.18 ORF33344 - 1.5e-08 34.6 6.2 1.9e-08 34.2 6.2 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Kelch_1 PF01344.25 ORF32722 - 2.5e-05 23.8 0.3 4.5e-05 22.9 0.3 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 ORF32722 - 0.00061 19.7 0.4 0.0013 18.7 0.4 1.6 1 1 0 1 1 1 1 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF32722 - 0.00084 19.5 0.0 0.0014 18.9 0.0 1.5 1 0 0 1 1 1 1 Kelch motif Kelch_2 PF07646.15 ORF32722 - 0.0067 16.4 0.7 0.022 14.7 0.7 1.9 1 1 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 ORF32722 - 0.01 15.8 0.0 0.32 11.0 0.0 2.2 2 0 0 2 2 2 1 Kelch motif Kelch_3 PF13415.6 ORF32722 - 0.023 15.0 0.1 0.046 14.0 0.1 1.6 1 1 0 1 1 1 0 Galactose oxidase, central domain Nic96 PF04097.14 ORF32386 - 0.062 11.7 0.1 0.069 11.6 0.1 1.1 1 0 0 1 1 1 0 Nup93/Nic96 zf-like PF04071.12 ORF32174 - 0.055 13.4 1.9 0.074 13.0 1.9 1.2 1 0 0 1 1 1 0 Cysteine-rich small domain DnaJ_CXXCXGXG PF00684.19 ORF32174 - 0.13 12.6 4.6 0.33 11.3 2.8 2.1 2 0 0 2 2 2 0 DnaJ central domain ABC2_membrane PF01061.24 ORF32055 - 8.6e-07 28.6 8.9 9.9e-07 28.4 8.9 1.0 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF32055 - 2.1 7.4 8.5 2.2 7.3 8.5 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein P22_portal PF16510.5 ORF31114 - 0.11 11.1 0.0 0.11 11.1 0.0 1.0 1 0 0 1 1 1 0 Phage P22-like portal protein CSD PF00313.22 ORF31073 - 2.4e-18 65.7 0.2 3.2e-18 65.3 0.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF31073 - 0.013 15.2 0.7 0.021 14.5 0.7 1.5 1 0 0 1 1 1 0 Ribonuclease B OB domain DUF3577 PF12101.8 ORF30940 - 0.03 14.1 0.2 0.035 13.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3577) Tubulin_C PF03953.17 ORF3059 - 0.00013 22.1 0.1 0.00026 21.2 0.0 1.5 2 0 0 2 2 2 1 Tubulin C-terminal domain 7TM_GPCR_Srd PF10317.9 ORF30578 - 0.023 13.9 6.3 0.025 13.8 6.3 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd Phage_F PF02305.17 ORF30578 - 0.3 9.8 0.2 0.39 9.4 0.2 1.0 1 0 0 1 1 1 0 Capsid protein (F protein) Pkinase PF00069.25 ORF30459 - 2.2e-09 37.1 0.0 2.3e-09 37.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30459 - 1.9e-08 33.9 0.0 2.2e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Topoisom_bac PF01131.20 ORF30459 - 0.028 13.5 0.1 0.032 13.3 0.1 1.0 1 0 0 1 1 1 0 DNA topoisomerase PGK PF00162.19 ORF30358 - 4.5e-27 95.0 0.2 4.7e-27 94.9 0.2 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase TTC5_OB PF16669.5 ORF30309 - 0.027 14.2 0.5 0.035 13.8 0.5 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat protein 5 OB fold domain Sel1 PF08238.12 ORF3027 - 1.1e-15 57.6 12.2 1.3e-09 38.4 0.3 3.1 3 0 0 3 3 3 3 Sel1 repeat TPR_1 PF00515.28 ORF3027 - 0.025 14.4 11.7 3.3 7.7 0.7 4.4 4 1 1 5 5 5 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF3027 - 0.042 14.1 1.5 0.57 10.5 1.5 2.6 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF3027 - 0.22 12.0 3.4 1.3 9.6 0.5 2.8 2 2 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF3027 - 7 7.0 12.9 3.7 7.9 0.1 4.0 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF3027 - 7.7 7.0 11.0 10 6.6 1.4 3.9 4 1 0 4 4 4 0 Tetratricopeptide repeat CLN6 PF15156.6 ORF28975 - 0.014 14.7 0.0 0.015 14.6 0.0 1.0 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 6 Lipoprotein_17 PF04200.12 ORF28975 - 0.76 10.2 10.3 1.4 9.3 10.3 1.5 1 1 0 1 1 1 0 Lipoprotein associated domain gag_pre-integrs PF13976.6 ORF28951 - 0.085 12.7 0.0 0.13 12.2 0.0 1.4 1 1 0 1 1 1 0 GAG-pre-integrase domain SWIB PF02201.18 ORF28852 - 0.22 11.5 0.0 0.35 10.8 0.0 1.3 1 0 0 1 1 1 0 SWIB/MDM2 domain Med13_N PF11597.8 ORF27802 - 0.028 13.8 0.6 0.03 13.7 0.6 1.1 1 0 0 1 1 1 0 Mediator complex subunit 13 N-terminal NLE PF08154.12 ORF27472 - 0.14 12.7 0.4 0.53 10.8 0.0 2.0 2 0 0 2 2 2 0 NLE (NUC135) domain Ocular_alb PF02101.15 ORF27333 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein NAD_binding_3 PF03447.16 ORF27196 - 0.038 14.6 0.0 0.13 12.9 0.0 1.7 2 0 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain Gryzun PF07919.12 ORF26467 - 0.25 10.1 0.2 0.23 10.2 0.2 1.1 1 0 0 1 1 1 0 Gryzun, putative trafficking through Golgi Peptidase_M22 PF00814.25 ORF25631 - 3.7e-14 53.1 0.0 4.3e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family Hormone_5 PF00184.17 ORF25631 - 0.03 15.2 0.2 0.038 14.8 0.2 1.1 1 0 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain CBS PF00571.28 ORF25597 - 1.1e-08 35.3 0.1 2.1e-07 31.3 0.0 2.0 2 0 0 2 2 2 1 CBS domain DUF4399 PF14347.6 ORF25597 - 0.1 13.0 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4399) PGC7_Stella PF15549.6 ORF25576 - 0.053 13.5 0.3 0.053 13.5 0.3 1.2 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain Tnp_DNA_bind PF14706.6 ORF25576 - 0.91 9.4 3.0 1.6 8.7 0.0 2.3 2 0 0 2 2 2 0 Transposase DNA-binding # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks243.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks243.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks243.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks243.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:08:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- VATC PF18716.1 ORF25105 - 0.31 10.9 2.1 0.35 10.8 1.0 1.6 2 0 0 2 2 2 0 Vms1-associating treble clef domain BT1 PF03092.16 ORF24596 - 0.0047 15.2 0.0 0.0054 15.0 0.0 1.0 1 0 0 1 1 1 1 BT1 family DUF1772 PF08592.11 ORF24596 - 0.024 15.0 0.0 0.024 15.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) FAM165 PF14981.6 ORF23861 - 0.13 12.1 0.1 0.2 11.5 0.1 1.3 1 0 0 1 1 1 0 FAM165 family Romo1 PF10247.9 ORF22977 - 0.067 13.6 2.6 0.17 12.3 2.6 1.7 1 1 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 bPH_4 PF06713.11 ORF21430 - 0.041 14.0 0.3 0.098 12.8 0.1 1.7 2 0 0 2 2 2 0 Bacterial PH domain DUF2567 PF10821.8 ORF20158 - 0.067 13.3 0.0 0.08 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2567) PSDC PF12588.8 ORF20067 - 0.092 12.7 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Phophatidylserine decarboxylase DUF3556 PF12077.8 ORF19826 - 0.00065 18.3 0.0 0.00067 18.2 0.0 1.0 1 0 0 1 1 1 1 Transmembrane protein of unknown function (DUF3556) Haemocyan_bet_s PF14830.6 ORF19087 - 0.017 15.1 0.3 3.2 7.8 0.0 2.1 2 0 0 2 2 2 0 Haemocyanin beta-sandwich AP-5_subunit_s1 PF15001.6 ORF18988 - 0.13 12.2 0.6 0.14 12.1 0.6 1.0 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 ATP19 PF11022.8 ORF18988 - 2.2 8.7 6.9 8.3 6.9 6.9 1.9 1 1 0 1 1 1 0 ATP synthase subunit K Ocular_alb PF02101.15 ORF18670 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein Ocular_alb PF02101.15 ORF18611 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein ECH_2 PF16113.5 ORF18195 - 5.2e-22 78.8 0.0 5.8e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase PPP5 PF08321.12 ORF18142 - 0.0093 16.2 0.2 0.016 15.4 0.1 1.5 1 1 0 1 1 1 1 PPP5 TPR repeat region HARE-HTH PF05066.13 ORF18142 - 0.04 14.3 0.0 0.055 13.9 0.0 1.2 1 0 0 1 1 1 0 HB1, ASXL, restriction endonuclease HTH domain MORN PF02493.20 ORF17071 - 1.4e-14 53.0 17.5 3.9e-06 26.4 1.4 3.7 3 0 0 3 3 3 3 MORN repeat DUF3048_C PF17479.2 ORF17071 - 0.2 12.0 3.0 3.6 8.0 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Ion_trans PF00520.31 ORF16028 - 0.042 13.1 0.1 0.049 12.8 0.1 1.1 1 0 0 1 1 1 0 Ion transport protein DOT1 PF08123.13 ORF15387 - 0.018 14.6 0.5 0.019 14.5 0.5 1.0 1 0 0 1 1 1 0 Histone methylation protein DOT1 FmiP_Thoc5 PF09766.9 ORF15387 - 0.13 11.6 5.8 0.14 11.4 5.8 1.0 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 DUF3392 PF11872.8 ORF15117 - 0.16 12.3 1.1 0.18 12.1 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3392) RNA_pol_Rpb1_4 PF05000.17 ORF15039 - 0.071 13.1 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 4 Ocular_alb PF02101.15 ORF14823 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein Spb1_C PF07780.12 ORF14351 - 1.4e-13 51.0 14.5 1.8e-13 50.6 14.5 1.2 1 0 0 1 1 1 1 Spb1 C-terminal domain DBR1 PF05011.13 ORF14351 - 0.03 14.7 0.9 0.035 14.5 0.9 1.2 1 0 0 1 1 1 0 Lariat debranching enzyme, C-terminal domain PrgI PF12666.7 ORF14256 - 0.13 12.9 8.4 0.11 13.3 6.4 1.9 1 1 1 2 2 2 0 PrgI family protein DUF728 PF05304.12 ORF13933 - 0.1 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) DUF5365 PF17326.2 ORF13794 - 0.0063 16.9 1.7 0.0075 16.7 1.7 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5365) RNR_Alpha PF17975.1 ORF13794 - 0.0068 16.9 1.0 0.0077 16.7 1.0 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase alpha domain KIAA1430 PF13879.6 ORF13794 - 0.028 15.2 0.8 0.028 15.2 0.8 2.1 1 1 1 2 2 2 0 KIAA1430 homologue Allexi_40kDa PF05549.11 ORF13794 - 0.14 11.7 2.7 0.15 11.6 2.7 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein CSD PF00313.22 ORF13332 - 2.4e-18 65.7 0.2 3.2e-18 65.3 0.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF13332 - 0.013 15.2 0.7 0.021 14.5 0.7 1.5 1 0 0 1 1 1 0 Ribonuclease B OB domain Methyltransf_16 PF10294.9 ORF13325 - 0.0031 17.3 0.0 0.0039 16.9 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase LmjF365940-deam PF14421.6 ORF11861 - 0.086 12.4 0.6 0.088 12.4 0.6 1.1 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases GM_CSF PF01109.17 ORF111345 - 0.034 14.3 0.0 0.043 14.0 0.0 1.3 1 0 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor Exo_endo_phos PF03372.23 ORF110117 - 0.011 15.3 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Aa_trans PF01490.18 ORF109286 - 2.3e-14 52.9 7.8 2.8e-14 52.7 7.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein GhoS PF11080.8 ORF107462 - 9.1e-33 112.1 0.0 1.1e-32 111.9 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease GhoS Ribosomal_L37ae PF01780.19 ORF107199 - 5e-30 103.4 2.7 5.8e-30 103.2 2.7 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family eIF_4EBP PF05456.11 ORF107143 - 0.088 12.8 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Peptidase_M22 PF00814.25 ORF106847 - 3.7e-14 53.1 0.0 4.3e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family Hormone_5 PF00184.17 ORF106847 - 0.03 15.2 0.2 0.038 14.8 0.2 1.1 1 0 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain Ribosomal_L37ae PF01780.19 ORF106258 - 1.7e-34 117.8 10.3 1.9e-34 117.6 10.3 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family zf-HC5HC2H PF13771.6 ORF106258 - 0.00076 19.7 0.7 0.00082 19.6 0.7 1.2 1 0 0 1 1 1 1 PHD-like zinc-binding domain CEBP_ZZ PF16366.5 ORF106258 - 0.02 15.1 0.7 0.03 14.6 0.7 1.3 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-RING_13 PF17977.1 ORF106258 - 0.052 13.7 3.2 0.072 13.2 3.2 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 ORF106258 - 0.68 10.0 5.7 2.3 8.3 1.0 2.0 1 1 1 2 2 2 0 Transposase zinc-ribbon domain BPS1 PF05633.11 ORF106254 - 2.4 7.1 6.0 2.7 6.9 6.0 1.0 1 0 0 1 1 1 0 Protein BYPASS1-related DUF4337 PF14235.6 ORF106241 - 1.8 8.7 5.5 2.2 8.3 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Kelch_1 PF01344.25 ORF105942 - 2.5e-05 23.8 0.3 4.5e-05 22.9 0.3 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 ORF105942 - 0.00061 19.7 0.4 0.0013 18.7 0.4 1.6 1 1 0 1 1 1 1 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF105942 - 0.00084 19.5 0.0 0.0014 18.9 0.0 1.5 1 0 0 1 1 1 1 Kelch motif Kelch_2 PF07646.15 ORF105942 - 0.0067 16.4 0.7 0.022 14.7 0.7 1.9 1 1 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 ORF105942 - 0.01 15.8 0.0 0.32 11.0 0.0 2.2 2 0 0 2 2 2 1 Kelch motif Kelch_3 PF13415.6 ORF105942 - 0.023 15.0 0.1 0.046 14.0 0.1 1.6 1 1 0 1 1 1 0 Galactose oxidase, central domain Cyclin_C_2 PF16899.5 ORF105703 - 0.14 12.5 0.0 0.21 12.0 0.0 1.4 1 1 0 1 1 1 0 Cyclin C-terminal domain HCMV_UL124 PF17609.2 ORF10481 - 0.05 13.8 0.0 0.062 13.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function MBD PF01429.19 ORF10481 - 0.11 12.2 0.9 0.21 11.3 0.9 1.5 1 0 0 1 1 1 0 Methyl-CpG binding domain HNH_3 PF13392.6 ORF104428 - 0.036 13.8 0.1 0.081 12.7 0.1 1.6 1 0 0 1 1 1 0 HNH endonuclease DUF3662 PF12401.8 ORF104428 - 0.11 12.9 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2662) Acetyltransf_11 PF13720.6 ORF103639 - 0.032 14.7 0.4 0.05 14.1 0.4 1.3 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Copine PF07002.16 ORF103324 - 2e-11 43.8 0.0 2.3e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 Copine DUF3918 PF13056.6 ORF103127 - 0.072 12.7 0.4 0.41 10.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) PRORP PF16953.5 ORF102437 - 4.4e-06 26.4 0.3 5.2e-06 26.2 0.3 1.1 1 0 0 1 1 1 1 Protein-only RNase P DUF4191 PF13829.6 ORF102239 - 1.2 8.5 4.6 1.4 8.2 4.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF1054 PF06335.12 ORF102142 - 0.22 11.4 7.6 0.25 11.3 7.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Iron_permease PF04120.12 ORF102142 - 8.4 6.2 7.3 1.5 8.6 2.6 1.8 1 1 1 2 2 2 0 Low affinity iron permease DUF1676 PF07898.13 ORF1015 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF3670 PF12419.8 ORF1015 - 0.16 11.8 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 SNF2 Helicase protein GP41 PF00517.17 ORF100861 - 0.00099 19.1 0.3 0.0011 18.9 0.3 1.0 1 0 0 1 1 1 1 Retroviral envelope protein TMEM169 PF15052.6 ORF100861 - 0.017 15.2 0.3 0.019 15.1 0.3 1.1 1 0 0 1 1 1 0 TMEM169 protein family Protocadherin PF08374.11 ORF100861 - 0.046 13.7 0.0 0.046 13.7 0.0 1.1 1 0 0 1 1 1 0 Protocadherin SsgA PF04686.12 ORF100840 - 0.012 15.6 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA Cytochrom_C1 PF02167.15 ORF100532 - 0.0093 15.7 0.2 0.054 13.2 0.4 1.8 1 1 1 2 2 2 1 Cytochrome C1 family DUF2733 PF10813.8 ORF100259 - 0.16 11.8 1.8 0.28 11.0 1.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) YqjK PF13997.6 ORF100217 - 0.44 10.8 3.4 0.7 10.2 3.4 1.3 1 0 0 1 1 1 0 YqjK-like protein TrkA_TMD PF18613.1 NODE_58143_length_289_cov_1.251969_g50204_i0reverse_frame_1 - 0.023 14.1 5.2 0.051 13.0 5.2 1.6 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain OST3_OST6 PF04756.13 NODE_58143_length_289_cov_1.251969_g50204_i0reverse_frame_1 - 0.066 12.5 0.0 0.075 12.4 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Aldedh PF00171.22 NODE_58139_length_289_cov_1.397638_g50200_i0forward_frame_1 - 3.6e-26 91.7 0.0 3.8e-26 91.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family CPP1-like PF11833.8 NODE_58130_length_289_cov_1.622047_g50191_i0reverse_frame_1 - 0.23 11.1 1.7 0.28 10.8 1.7 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like MAJIN PF15077.6 NODE_58125_length_289_cov_1.716535_g50186_i0reverse_frame_1 - 1.3 8.8 4.9 1.5 8.6 4.9 1.0 1 0 0 1 1 1 0 Membrane-anchored junction protein Membralin PF09746.9 NODE_58125_length_289_cov_1.716535_g50186_i0reverse_frame_1 - 4.7 6.1 6.4 5.5 5.9 6.4 1.0 1 0 0 1 1 1 0 Tumour-associated protein CPBP PF02517.16 NODE_58125_length_289_cov_1.716535_g50186_i0forward_frame_1 - 0.08 13.3 4.7 0.088 13.2 4.7 1.2 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease Mob1_phocein PF03637.17 NODE_58124_length_289_cov_1.732283_g50185_i0forward_frame_1 - 0.23 11.5 3.3 0.33 11.0 3.3 1.2 1 0 0 1 1 1 0 Mob1/phocein family Vitellogenin_N PF01347.22 NODE_58107_length_289_cov_2.114173_g50168_i0reverse_frame_1 - 0.16 10.3 0.1 0.18 10.1 0.1 1.0 1 0 0 1 1 1 0 Lipoprotein amino terminal region Iwr1 PF08574.10 NODE_58105_length_289_cov_2.141732_g50166_i0forward_frame_1 - 0.13 13.3 8.8 0.17 12.9 8.8 1.2 1 0 0 1 1 1 0 Transcription factor Iwr1 DUF3146 PF11344.8 NODE_58104_length_289_cov_2.141732_g50165_i0reverse_frame_1 - 0.09 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3146) FTHFS PF01268.19 NODE_58102_length_289_cov_2.157480_g50163_i0forward_frame_1 - 3.6e-25 88.2 0.4 4e-25 88.0 0.4 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase TAT_signal PF10518.9 NODE_58101_length_289_cov_2.188976_g50162_i0forward_frame_1 - 0.083 12.8 0.2 0.16 11.9 0.2 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Ku_N PF03731.15 NODE_58097_length_289_cov_2.303150_g50158_i0reverse_frame_1 - 5.1e-11 42.7 0.2 5.4e-11 42.7 0.2 1.0 1 0 0 1 1 1 1 Ku70/Ku80 N-terminal alpha/beta domain DUF3342 PF11822.8 NODE_58092_length_289_cov_2.397638_g50153_i0forward_frame_1 - 0.039 14.2 0.1 0.043 14.0 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3342) zf-C2H2_4 PF13894.6 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.0034 18.1 2.6 0.0089 16.8 2.5 1.8 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.0099 16.1 1.2 0.022 15.0 1.2 1.6 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.012 16.1 2.0 0.012 16.1 2.0 1.9 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-Di19 PF05605.12 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.027 14.8 2.6 0.14 12.4 2.7 2.0 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_6 PF13912.6 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.1 12.6 1.8 0.21 11.7 1.8 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger zf-RING_2 PF13639.6 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.11 12.9 1.9 0.19 12.1 1.9 1.3 1 0 0 1 1 1 0 Ring finger domain His_Phos_2 PF00328.22 NODE_58085_length_289_cov_2.547244_g50146_i0forward_frame_1 - 0.0075 15.7 0.0 0.0077 15.6 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Phage_F PF02305.17 NODE_58081_length_289_cov_2.622047_g50142_i0reverse_frame_1 - 0.069 11.9 0.1 0.082 11.6 0.1 1.0 1 0 0 1 1 1 0 Capsid protein (F protein) Bac_globin PF01152.21 NODE_58075_length_289_cov_2.889764_g50136_i0forward_frame_1 - 0.63 10.2 3.5 0.95 9.6 3.5 1.3 1 0 0 1 1 1 0 Bacterial-like globin LacY_symp PF01306.19 NODE_58073_length_289_cov_2.964567_g50134_i0reverse_frame_1 - 6.2e-49 166.9 2.6 6.7e-49 166.8 2.6 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1_like PF12832.7 NODE_58073_length_289_cov_2.964567_g50134_i0reverse_frame_1 - 3.7e-05 22.8 2.4 4.4e-05 22.5 2.4 1.0 1 0 0 1 1 1 1 MFS_1 like family Thioredoxin_8 PF13905.6 NODE_58070_length_289_cov_3.015748_g50131_i0forward_frame_1 - 0.0042 17.4 0.6 0.0058 16.9 0.6 1.4 1 1 0 1 1 1 1 Thioredoxin-like DUF809 PF05663.11 NODE_58060_length_289_cov_11.074803_g50121_i0reverse_frame_1 - 0.13 12.4 1.8 0.16 12.1 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) OmpA PF00691.20 NODE_58060_length_289_cov_11.074803_g50121_i0forward_frame_1 - 0.024 15.0 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 OmpA family DUF4498 PF14926.6 NODE_58058_length_289_cov_22.452756_g50119_i0reverse_frame_1 - 0.16 11.2 0.1 0.21 10.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4498) HNH_4 PF13395.6 NODE_58044_length_289_cov_59.590551_g50105_i0reverse_frame_1 - 0.03 14.2 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 HNH endonuclease Arg_repressor PF01316.21 NODE_58044_length_289_cov_59.590551_g50105_i0forward_frame_1 - 0.11 12.3 0.3 0.19 11.5 0.3 1.3 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain WSK PF03832.13 NODE_58043_length_289_cov_59.972441_g50104_i0forward_frame_1 - 0.46 10.2 2.1 0.7 9.6 2.1 1.2 1 0 0 1 1 1 0 WSK motif Mqo PF06039.15 NODE_58042_length_289_cov_60.149606_g50103_i0forward_frame_1 - 0.069 11.7 0.0 0.079 11.5 0.0 1.0 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) CSRNP_N PF16019.5 NODE_58040_length_289_cov_63.216535_g50101_i0forward_frame_1 - 0.14 12.1 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus OSCP PF00213.18 NODE_58031_length_289_cov_75.814961_g50092_i0forward_frame_1 - 2.3e-07 31.1 0.3 2.6e-07 30.9 0.3 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit Glyco_hydro_10 PF00331.20 NODE_58031_length_289_cov_75.814961_g50092_i0forward_frame_1 - 0.044 12.9 0.0 0.052 12.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 10 Ion_trans PF00520.31 NODE_58023_length_289_cov_87.047244_g50084_i0reverse_frame_1 - 0.0016 17.7 0.0 0.0018 17.5 0.0 1.0 1 0 0 1 1 1 1 Ion transport protein Ribosomal_S27e PF01667.17 NODE_58020_length_289_cov_90.881890_g50081_i0reverse_frame_1 - 0.0076 15.9 0.1 0.012 15.4 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S27 Ank_4 PF13637.6 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 2.1e-13 50.5 0.6 4.6e-09 36.6 0.2 1.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 9.5e-13 48.5 0.0 1.2e-12 48.2 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 6.1e-11 42.3 0.1 0.00037 20.8 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 1.2e-08 35.1 0.2 1.9e-07 31.2 0.1 2.1 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 1.4e-08 34.3 0.0 0.00052 20.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat PSII_Ycf12 PF05969.11 NODE_58011_length_289_cov_740.204724_g50072_i0reverse_frame_1 - 0.058 13.4 0.1 0.058 13.4 0.1 1.5 2 0 0 2 2 2 0 Photosystem II complex subunit Ycf12 YajC PF02699.15 NODE_58008_length_289_cov_1999.578740_g50069_i0reverse_frame_1 - 0.24 11.3 3.3 0.4 10.6 3.3 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit DUF3810 PF12725.7 NODE_58008_length_289_cov_1999.578740_g50069_i0forward_frame_1 - 5.9 6.1 6.6 7 5.9 6.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) CAF-1_p60_C PF15512.6 NODE_58004_length_290_cov_1.152941_g50065_i0reverse_frame_1 - 3.5 8.1 7.6 4 7.9 7.6 1.1 1 0 0 1 1 1 0 Chromatin assembly factor complex 1 subunit p60, C-terminal DUF3463 PF11946.8 NODE_57996_length_290_cov_1.396078_g50057_i0reverse_frame_1 - 0.019 14.7 0.2 0.027 14.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) Spectrin PF00435.21 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.0029 18.1 4.9 0.0062 17.0 4.9 1.6 1 1 0 1 1 1 1 Spectrin repeat Jnk-SapK_ap_N PF09744.9 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.012 15.8 10.1 0.016 15.5 10.1 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF3450 PF11932.8 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.025 13.9 10.2 0.031 13.6 6.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Cytochrom_B562 PF07361.11 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.091 13.4 5.9 0.2 12.3 5.9 1.5 1 1 0 1 1 1 0 Cytochrome b562 FAM76 PF16046.5 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.13 11.6 7.4 0.21 10.9 7.4 1.3 1 1 0 1 1 1 0 FAM76 protein Spc7 PF08317.11 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.16 10.8 10.7 0.18 10.7 10.7 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.24 10.9 5.5 0.26 10.8 5.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.7 10.1 10.7 0.56 10.4 3.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Atg14 PF10186.9 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.79 8.7 8.6 0.9 8.6 8.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 bZIP_1 PF00170.21 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.85 9.8 12.6 1.5 8.9 0.1 3.1 3 0 0 3 3 3 0 bZIP transcription factor UPF0242 PF06785.11 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.92 9.6 11.6 1.3 9.1 11.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Cnn_1N PF07989.11 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 1.2 9.3 13.7 6.7 7.0 7.6 2.4 1 1 0 2 2 2 0 Centrosomin N-terminal motif 1 TSC22 PF01166.18 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 2.6 8.4 8.5 9.1 6.7 0.5 3.0 2 2 1 3 3 3 0 TSC-22/dip/bun family FliD_N PF02465.18 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 6.3 7.6 10.0 33 5.3 7.9 2.6 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Pkinase PF00069.25 NODE_57990_length_290_cov_1.513725_g50051_i0forward_frame_1 - 6.7e-07 28.9 0.2 7e-07 28.9 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57990_length_290_cov_1.513725_g50051_i0forward_frame_1 - 0.00018 20.9 0.1 0.0002 20.7 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Gelsolin PF00626.22 NODE_57987_length_290_cov_1.666667_g50048_i0reverse_frame_1 - 0.00025 20.9 0.4 0.00041 20.2 0.3 1.4 1 1 0 1 1 1 1 Gelsolin repeat Lsr2 PF11774.8 NODE_57987_length_290_cov_1.666667_g50048_i0reverse_frame_1 - 0.097 12.8 0.9 0.14 12.3 0.9 1.2 1 0 0 1 1 1 0 Lsr2 PIP5K PF01504.18 NODE_57985_length_290_cov_1.690196_g50046_i0reverse_frame_1 - 9e-24 84.1 3.0 9.7e-24 84.0 3.0 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Histone_HNS PF00816.21 NODE_57984_length_290_cov_1.721569_g50045_i0reverse_frame_1 - 0.17 12.7 0.2 0.28 12.1 0.2 1.3 1 0 0 1 1 1 0 H-NS histone family Sina PF03145.16 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_1 - 5.8e-05 23.1 3.4 5.8e-05 23.1 3.4 1.4 2 0 0 2 2 2 1 Seven in absentia protein family zf-TRAF PF02176.18 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_1 - 7e-05 23.4 10.2 0.00055 20.6 3.8 2.7 1 1 1 2 2 2 2 TRAF-type zinc finger zf-TRAF_2 PF15965.5 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_1 - 0.0074 16.7 2.6 0.011 16.2 2.7 1.4 1 1 0 1 1 1 1 TRAF-like zinc-finger TED PF08341.11 NODE_57976_length_290_cov_1.839216_g50037_i0reverse_frame_1 - 0.0041 17.5 0.1 0.0058 17.0 0.1 1.2 1 0 0 1 1 1 1 Thioester domain Anp1 PF03452.14 NODE_57976_length_290_cov_1.839216_g50037_i0reverse_frame_1 - 0.025 14.0 0.4 0.027 13.9 0.4 1.1 1 0 0 1 1 1 0 Anp1 RT_RNaseH PF17917.1 NODE_57967_length_290_cov_2.003922_g50028_i0reverse_frame_1 - 9.9e-08 32.2 0.0 1.1e-07 32.1 0.0 1.0 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase Head-tail_con PF12236.8 NODE_57967_length_290_cov_2.003922_g50028_i0reverse_frame_1 - 0.11 10.9 0.0 0.12 10.7 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage head to tail connecting protein Epimerase PF01370.21 NODE_57960_length_290_cov_2.407843_g50021_i0forward_frame_1 - 9.4e-05 22.0 0.0 0.0003 20.3 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 NODE_57960_length_290_cov_2.407843_g50021_i0forward_frame_1 - 0.00041 19.6 0.0 0.00046 19.5 0.0 1.0 1 0 0 1 1 1 1 Male sterility protein Toxin_trans PF07952.12 NODE_57960_length_290_cov_2.407843_g50021_i0forward_frame_1 - 0.15 11.2 0.1 0.16 11.0 0.1 1.0 1 0 0 1 1 1 0 Clostridium neurotoxin, Translocation domain PAXNEB PF05625.11 NODE_57957_length_290_cov_2.568627_g50018_i0forward_frame_1 - 1.1 8.3 2.3 1.2 8.1 2.3 1.0 1 0 0 1 1 1 0 PAXNEB protein TPR_14 PF13428.6 NODE_57955_length_290_cov_2.647059_g50016_i0forward_frame_1 - 0.0024 18.6 0.4 0.21 12.5 0.1 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat NRDE-2 PF08424.10 NODE_57955_length_290_cov_2.647059_g50016_i0forward_frame_1 - 0.031 13.4 0.1 0.11 11.7 0.0 1.6 1 1 0 1 1 1 0 NRDE-2, necessary for RNA interference TPR_17 PF13431.6 NODE_57955_length_290_cov_2.647059_g50016_i0forward_frame_1 - 0.038 14.4 0.1 1.8 9.1 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_57955_length_290_cov_2.647059_g50016_i0forward_frame_1 - 0.081 13.0 1.0 14 6.0 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat HAT PF02184.16 NODE_57955_length_290_cov_2.647059_g50016_i0forward_frame_1 - 0.9 9.6 13.2 19 5.3 1.4 4.4 4 1 0 4 4 4 0 HAT (Half-A-TPR) repeat HTH_WhiA PF02650.14 NODE_57943_length_290_cov_3.501961_g50004_i0reverse_frame_1 - 0.14 12.5 0.0 0.18 12.2 0.0 1.1 1 0 0 1 1 1 0 WhiA C-terminal HTH domain Trans_coact PF16805.5 NODE_57935_length_290_cov_19.721569_g49996_i0reverse_frame_1 - 0.02 15.0 2.4 2.9 8.1 0.3 2.1 2 0 0 2 2 2 0 Phage late-transcription coactivator DUF4218 PF13960.6 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_1 - 0.034 13.7 0.4 0.047 13.3 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4218) DUF1944 PF09175.10 NODE_57919_length_290_cov_72.078431_g49980_i0forward_frame_1 - 0.025 14.4 0.1 0.027 14.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1944) PAC3 PF10178.9 NODE_57916_length_290_cov_75.835294_g49977_i0reverse_frame_1 - 3e-09 36.9 0.1 4.2e-09 36.4 0.1 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 3 Pkinase PF00069.25 NODE_57914_length_290_cov_77.819608_g49975_i0reverse_frame_1 - 2.6e-07 30.3 1.5 3.4e-07 29.9 1.5 1.1 1 0 0 1 1 1 1 Protein kinase domain Herpes_U47 PF05467.11 NODE_57914_length_290_cov_77.819608_g49975_i0forward_frame_1 - 0.1 10.8 1.3 0.11 10.6 1.3 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 YukD PF08817.10 NODE_57911_length_290_cov_81.450980_g49972_i0forward_frame_1 - 0.1 13.3 0.1 0.17 12.6 0.1 1.4 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD ubiquitin PF00240.23 NODE_57911_length_290_cov_81.450980_g49972_i0forward_frame_1 - 0.1 12.3 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin family PPR_3 PF13812.6 NODE_57910_length_290_cov_85.352941_g49971_i0reverse_frame_1 - 0.038 14.1 0.0 0.049 13.7 0.0 1.2 1 0 0 1 1 1 0 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_57910_length_290_cov_85.352941_g49971_i0reverse_frame_1 - 0.063 13.5 0.0 0.087 13.0 0.0 1.2 1 0 0 1 1 1 0 PPR repeat family p450 PF00067.22 NODE_57908_length_290_cov_101.219608_g49969_i0forward_frame_1 - 1.9e-11 43.4 0.0 2.1e-11 43.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Med9 PF07544.13 NODE_57906_length_290_cov_110.494118_g49967_i0reverse_frame_1 - 0.019 15.1 1.9 0.027 14.5 1.9 1.3 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 C_tripleX PF02363.19 NODE_57906_length_290_cov_110.494118_g49967_i0forward_frame_1 - 0.31 11.4 9.9 0.48 10.8 9.9 1.3 1 0 0 1 1 1 0 Cysteine rich repeat PBP1_TM PF14812.6 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_1 - 0.018 15.4 1.3 0.024 15.0 1.3 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF719 PF05334.13 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_1 - 0.021 15.0 2.2 0.024 14.8 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF719) DUF3408 PF11888.8 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_1 - 0.023 14.8 2.1 0.025 14.7 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) RNA_polI_A34 PF08208.11 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_1 - 0.14 12.2 7.7 0.18 11.9 7.7 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Slp PF03843.13 NODE_57903_length_290_cov_135.698039_g49964_i0reverse_frame_1 - 0.091 12.1 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein Slp family Antimicrobial25 PF16839.5 NODE_57900_length_290_cov_194.988235_g49961_i0forward_frame_1 - 1.8 8.7 5.3 0.21 11.7 1.0 1.6 2 0 0 2 2 2 0 Nematode antimicrobial peptide Ribosomal_L31e PF01198.19 NODE_57893_length_290_cov_1381.423529_g49954_i0forward_frame_1 - 1.5e-13 50.7 0.5 2.5e-13 50.1 0.5 1.4 1 0 0 1 1 1 1 Ribosomal protein L31e PyocinActivator PF11112.8 NODE_57876_length_291_cov_1.289062_g49937_i0reverse_frame_1 - 0.018 15.2 0.0 0.025 14.7 0.0 1.2 1 0 0 1 1 1 0 Pyocin activator protein PrtN MapZ_C2 PF18708.1 NODE_57865_length_291_cov_1.488281_g49926_i0forward_frame_1 - 0.065 13.5 0.0 0.08 13.2 0.0 1.1 1 0 0 1 1 1 0 MapZ extracellular C-terminal domain 2 PIRT PF15099.6 NODE_57863_length_291_cov_1.546875_g49924_i0reverse_frame_1 - 0.029 13.9 0.2 0.034 13.7 0.2 1.4 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family 7tm_1 PF00001.21 NODE_57863_length_291_cov_1.546875_g49924_i0reverse_frame_1 - 0.066 12.5 2.0 0.078 12.3 2.0 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) Comm PF15957.5 NODE_57863_length_291_cov_1.546875_g49924_i0forward_frame_1 - 0.035 14.5 1.5 0.045 14.1 1.5 1.2 1 0 0 1 1 1 0 Commissureless TMEM151 PF14857.6 NODE_57863_length_291_cov_1.546875_g49924_i0forward_frame_1 - 5.8 5.7 10.2 6.8 5.5 10.2 1.0 1 0 0 1 1 1 0 TMEM151 family Colipase-like PF15083.6 NODE_57861_length_291_cov_1.558594_g49922_i0reverse_frame_1 - 0.22 11.7 4.1 0.45 10.7 4.1 1.6 1 1 0 1 1 1 0 Colipase-like DUF4215 PF13948.6 NODE_57859_length_291_cov_1.597656_g49920_i0forward_frame_1 - 0.00088 19.7 11.6 0.008 16.6 3.9 2.3 2 1 0 2 2 2 2 Domain of unknown function (DUF4215) Cytochrom_D1 PF02239.16 NODE_57859_length_291_cov_1.597656_g49920_i0forward_frame_1 - 0.18 10.3 0.0 0.21 10.1 0.0 1.1 1 0 0 1 1 1 0 Cytochrome D1 heme domain DUF4719 PF15843.5 NODE_57858_length_291_cov_1.632812_g49919_i0forward_frame_1 - 0.18 11.9 1.4 0.19 11.8 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) ECSCR PF15820.5 NODE_57857_length_291_cov_1.714844_g49918_i0reverse_frame_1 - 0.034 14.0 0.5 0.044 13.6 0.5 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF4051 PF13260.6 NODE_57857_length_291_cov_1.714844_g49918_i0reverse_frame_1 - 0.11 12.2 3.6 0.18 11.6 3.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) DUF2367 PF10164.9 NODE_57852_length_291_cov_1.753906_g49913_i0reverse_frame_1 - 0.00065 20.2 1.7 0.0011 19.4 1.7 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2367) AIM3 PF17096.5 NODE_57852_length_291_cov_1.753906_g49913_i0forward_frame_1 - 0.84 10.6 3.7 8.4 7.4 0.2 2.2 1 1 1 2 2 2 0 Altered inheritance of mitochondria protein 3 Ni_hydr_CYTB PF01292.20 NODE_57840_length_291_cov_2.050781_g49901_i0reverse_frame_1 - 0.029 14.0 0.4 0.041 13.5 0.4 1.3 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 MetOD1 PF18546.1 NODE_57836_length_291_cov_2.152344_g49897_i0forward_frame_1 - 0.014 15.3 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Metanogen output domain 1 Prp31_C PF09785.9 NODE_57836_length_291_cov_2.152344_g49897_i0forward_frame_1 - 0.14 13.1 0.0 0.16 12.9 0.0 1.1 1 0 0 1 1 1 0 Prp31 C terminal domain Collagen_mid PF15984.5 NODE_57836_length_291_cov_2.152344_g49897_i0forward_frame_1 - 0.16 11.7 0.0 0.17 11.6 0.0 1.0 1 0 0 1 1 1 0 Bacterial collagen, middle region Pkinase PF00069.25 NODE_57835_length_291_cov_2.210938_g49896_i0reverse_frame_1 - 9.2e-16 58.0 0.1 1e-15 57.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57835_length_291_cov_2.210938_g49896_i0reverse_frame_1 - 4.4e-07 29.4 0.0 5e-07 29.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 NODE_57835_length_291_cov_2.210938_g49896_i0reverse_frame_1 - 0.0054 16.4 0.1 0.0055 16.3 0.1 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Amidohydro_1 PF01979.20 NODE_57828_length_291_cov_2.457031_g49889_i0forward_frame_1 - 0.02 14.2 0.0 0.02 14.2 0.0 1.0 1 0 0 1 1 1 0 Amidohydrolase family PUA_3 PF17785.1 NODE_57827_length_291_cov_2.531250_g49888_i0forward_frame_1 - 6.3e-05 22.7 0.0 9.1e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 PUA-like domain ATP-synt_8 PF00895.20 NODE_57819_length_291_cov_3.117188_g49880_i0forward_frame_1 - 0.056 13.9 1.1 0.082 13.4 1.1 1.3 1 0 0 1 1 1 0 ATP synthase protein 8 CRISPR_Cse1 PF09481.10 NODE_57818_length_291_cov_3.121094_g49879_i0forward_frame_1 - 0.021 13.9 0.3 0.024 13.7 0.3 1.0 1 0 0 1 1 1 0 CRISPR-associated protein Cse1 (CRISPR_cse1) Melittin PF01372.17 NODE_57816_length_291_cov_3.855469_g49877_i0reverse_frame_1 - 0.044 13.7 0.0 0.13 12.2 0.0 1.8 1 0 0 1 1 1 0 Melittin Dppa2_A PF14049.6 NODE_57813_length_291_cov_4.726562_g49874_i0forward_frame_1 - 0.27 11.4 0.9 0.43 10.8 0.9 1.3 1 0 0 1 1 1 0 Dppa2/4 conserved region in higher vertebrates SHIPPO-rpt PF07004.12 NODE_57807_length_291_cov_28.718750_g49868_i0forward_frame_1 - 0.12 13.3 0.4 0.94 10.5 0.0 2.3 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat JIP_LZII PF16471.5 NODE_57801_length_291_cov_52.664062_g49862_i0reverse_frame_1 - 0.17 12.1 3.5 0.3 11.3 1.3 2.0 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II NCE101 PF11654.8 NODE_57797_length_291_cov_58.230469_g49858_i0forward_frame_1 - 1.2 8.9 5.5 7.3 6.4 0.3 2.4 2 0 0 2 2 2 0 Non-classical export protein 1 DUF4658 PF15555.6 NODE_57797_length_291_cov_58.230469_g49858_i0forward_frame_1 - 1.6 8.8 16.1 2.3 8.3 1.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4658) GHD PF17834.1 NODE_57796_length_291_cov_58.554688_g49857_i0reverse_frame_1 - 0.051 13.6 0.7 0.063 13.3 0.1 1.4 2 0 0 2 2 2 0 Beta-sandwich domain in beta galactosidase Ribosomal_L34 PF00468.17 NODE_57790_length_291_cov_67.949219_g49851_i0reverse_frame_1 - 0.022 14.7 3.8 0.022 14.7 3.8 2.3 2 0 0 2 2 2 0 Ribosomal protein L34 Kinase-like PF14531.6 NODE_57786_length_291_cov_74.746094_g49847_i0reverse_frame_1 - 0.018 14.4 0.2 0.018 14.3 0.2 1.1 1 0 0 1 1 1 0 Kinase-like DEFB136 PF17333.2 NODE_57785_length_291_cov_75.062500_g49846_i0reverse_frame_1 - 0.74 9.8 12.1 0.33 11.0 9.5 1.7 1 1 1 2 2 2 0 Beta defensin 136 Methyltransf_24 PF13578.6 NODE_57780_length_291_cov_92.550781_g49841_i0reverse_frame_1 - 5e-05 24.3 0.1 7.7e-05 23.7 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain OapA_N PF08525.11 NODE_57780_length_291_cov_92.550781_g49841_i0forward_frame_1 - 0.09 12.7 0.5 0.15 12.0 0.5 1.4 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif RHH_1 PF01402.21 NODE_57778_length_291_cov_99.527344_g49839_i0forward_frame_1 - 0.048 13.6 0.7 0.17 11.8 0.4 1.8 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family Thoc2 PF11732.8 NODE_57775_length_291_cov_117.335938_g49836_i0forward_frame_1 - 0.12 12.4 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 Transcription- and export-related complex subunit Histone_H2A_C PF16211.5 NODE_57773_length_291_cov_124.121094_g49834_i0forward_frame_1 - 0.16 11.8 0.9 0.3 10.9 0.9 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A AF2331-like PF14556.6 NODE_57758_length_291_cov_42308.457031_g49819_i0reverse_frame_1 - 0.092 13.3 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 AF2331-like EF-hand_1 PF00036.32 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 1.8e-17 61.5 1.2 5.3e-08 31.9 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 4.8e-15 55.8 0.8 5.8e-15 55.5 0.8 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 2e-14 52.3 0.4 2.3e-06 26.8 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 1.5e-13 49.5 0.6 2.2e-07 30.2 0.0 2.3 2 1 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 4.9e-13 48.7 2.3 6.1e-08 32.4 0.2 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.0005 20.3 0.1 0.0008 19.7 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.0011 19.3 0.3 0.0013 19.0 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.0045 17.8 0.0 0.0056 17.5 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.019 14.9 0.2 0.046 13.7 0.2 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.048 13.9 0.0 0.056 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.13 10.8 0.0 0.15 10.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.15 11.9 0.4 0.81 9.6 0.3 2.1 2 0 0 2 2 2 0 EF hand KIAA1430 PF13879.6 NODE_57741_length_292_cov_1.490272_g49802_i0reverse_frame_3 - 0.099 13.4 0.5 0.11 13.2 0.5 1.3 1 1 0 1 1 1 0 KIAA1430 homologue Lig_chan PF00060.26 NODE_57728_length_292_cov_1.929961_g49789_i0forward_frame_3 - 0.29 10.9 2.0 0.27 11.0 0.7 1.5 1 1 1 2 2 2 0 Ligand-gated ion channel Cas6b_N PF17955.1 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_3 - 0.11 12.6 3.0 0.25 11.4 0.3 2.0 1 1 1 2 2 2 0 Cas6b N-terminal domain CobT PF06213.12 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 0.086 12.2 11.6 0.095 12.1 11.6 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Vfa1 PF08432.10 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 0.21 11.9 11.7 0.23 11.8 11.7 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF913 PF06025.12 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 0.31 10.0 4.1 0.32 9.9 4.1 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) RPN2_C PF18004.1 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 0.56 10.1 11.0 0.67 9.9 11.0 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain RRN3 PF05327.11 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 1.1 7.7 8.8 1.1 7.7 8.8 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Presenilin PF01080.17 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 1.4 7.6 6.5 1.4 7.6 6.5 1.0 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 1.7 7.3 8.1 1.8 7.3 8.1 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Zip PF02535.22 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 1.9 7.6 5.8 2.1 7.5 5.8 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter FAM176 PF14851.6 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 2.3 7.8 9.1 3 7.5 9.1 1.2 1 0 0 1 1 1 0 FAM176 family CDC45 PF02724.14 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 3.9 5.6 11.4 4.3 5.5 11.4 1.0 1 0 0 1 1 1 0 CDC45-like protein Connexin PF00029.19 NODE_57725_length_292_cov_1.988327_g49786_i0reverse_frame_2 - 4.1 7.1 5.7 4.3 7.0 5.7 1.1 1 0 0 1 1 1 0 Connexin GARS_A PF01071.19 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 1.2e-23 83.9 0.0 1.4e-23 83.7 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.00015 22.5 0.0 0.00028 21.6 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain ATP-grasp PF02222.22 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.0017 18.0 0.0 0.0021 17.7 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.0023 17.5 0.0 0.0027 17.2 0.0 1.1 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain tRNA_synt_1c_R1 PF04558.15 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.059 13.4 0.0 0.062 13.3 0.0 1.1 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 RimK PF08443.11 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.063 12.9 0.0 0.083 12.5 0.0 1.1 1 0 0 1 1 1 0 RimK-like ATP-grasp domain ATP-grasp_2 PF08442.10 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.077 12.6 0.0 0.097 12.2 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain ATPgrasp_ST PF14397.6 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.16 11.2 0.0 0.18 11.0 0.0 1.0 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Exo_endo_phos_2 PF14529.6 NODE_57721_length_292_cov_2.143969_g49782_i0forward_frame_3 - 0.013 15.4 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Peptidase_M16 PF00675.20 NODE_57720_length_292_cov_2.171206_g49781_i0forward_frame_3 - 0.0016 18.4 0.0 0.0019 18.2 0.0 1.3 1 1 0 1 1 1 1 Insulinase (Peptidase family M16) Ins145_P3_rec PF08709.11 NODE_57720_length_292_cov_2.171206_g49781_i0forward_frame_3 - 0.066 12.4 0.0 0.071 12.3 0.0 1.0 1 0 0 1 1 1 0 Inositol 1,4,5-trisphosphate/ryanodine receptor SfsA PF03749.13 NODE_57717_length_292_cov_2.544747_g49778_i0forward_frame_2 - 0.093 12.6 0.1 2.9 7.8 0.0 2.0 1 1 1 2 2 2 0 Sugar fermentation stimulation protein RE domain CD45 PF12567.8 NODE_57714_length_292_cov_2.649805_g49775_i0reverse_frame_2 - 0.12 12.3 0.5 14 5.8 0.0 2.3 2 0 0 2 2 2 0 Leukocyte receptor CD45 Spo7 PF03907.13 NODE_57712_length_292_cov_2.739300_g49773_i0reverse_frame_2 - 0.18 11.3 0.5 0.2 11.1 0.5 1.1 1 0 0 1 1 1 0 Spo7-like protein EF-hand_1 PF00036.32 NODE_57712_length_292_cov_2.739300_g49773_i0forward_frame_2 - 1.2e-06 27.7 0.8 4.1e-05 22.8 0.3 2.3 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 NODE_57712_length_292_cov_2.739300_g49773_i0forward_frame_2 - 4.4e-06 26.4 0.3 1.5e-05 24.8 0.1 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 NODE_57712_length_292_cov_2.739300_g49773_i0forward_frame_2 - 7.4e-06 26.3 0.3 1.9e-05 25.0 0.3 1.8 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_57712_length_292_cov_2.739300_g49773_i0forward_frame_2 - 0.00026 20.4 0.3 0.0018 17.7 0.1 2.2 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_57712_length_292_cov_2.739300_g49773_i0forward_frame_2 - 0.00032 20.4 0.2 0.011 15.7 0.1 2.3 2 0 0 2 2 2 1 EF-hand domain v110 PF01639.17 NODE_57712_length_292_cov_2.739300_g49773_i0forward_frame_2 - 0.062 13.2 0.1 0.065 13.1 0.1 1.3 1 0 0 1 1 1 0 Viral family 110 AAA_lid_2 PF17863.1 NODE_57705_length_292_cov_3.210117_g49766_i0reverse_frame_2 - 0.067 13.0 1.7 0.084 12.7 0.6 1.7 1 1 1 2 2 2 0 AAA lid domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks244.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks244.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks244.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks244.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AMP-binding_C PF13193.6 NODE_57703_length_292_cov_3.408560_g49764_i0reverse_frame_3 - 5.5e-08 33.7 1.0 1.3e-07 32.4 0.5 1.7 1 1 1 2 2 2 1 AMP-binding enzyme C-terminal domain ZZ PF00569.17 NODE_57702_length_292_cov_3.443580_g49763_i0forward_frame_2 - 0.054 13.3 0.2 0.1 12.5 0.2 1.4 1 0 0 1 1 1 0 Zinc finger, ZZ type SOCS_box PF07525.16 NODE_57696_length_292_cov_4.731518_g49757_i0forward_frame_2 - 0.016 15.6 0.6 0.035 14.5 0.6 1.5 1 0 0 1 1 1 0 SOCS box Lamprin PF06403.11 NODE_57695_length_292_cov_5.295720_g49756_i0forward_frame_2 - 3.7 7.5 12.8 2.3 8.2 1.5 2.0 1 1 1 2 2 2 0 Lamprin EphA2_TM PF14575.6 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_3 - 0.02 15.8 0.5 0.027 15.4 0.2 1.4 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain ODV-E18 PF10717.9 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_3 - 1.8 8.5 10.8 0.39 10.6 6.1 1.9 1 1 1 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Abhydrolase_3 PF07859.13 NODE_57690_length_292_cov_31.377432_g49751_i0forward_frame_2 - 0.004 17.0 0.0 0.0078 16.1 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_57690_length_292_cov_31.377432_g49751_i0forward_frame_2 - 0.093 12.0 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 FAM199X PF15814.5 NODE_57688_length_292_cov_41.964981_g49749_i0forward_frame_3 - 0.00032 19.9 2.5 0.00036 19.7 2.5 1.0 1 0 0 1 1 1 1 Protein family FAM199X SR-25 PF10500.9 NODE_57688_length_292_cov_41.964981_g49749_i0forward_frame_3 - 0.14 11.8 7.9 0.13 11.8 7.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Spt5_N PF11942.8 NODE_57683_length_292_cov_50.533074_g49744_i0reverse_frame_3 - 0.3 12.1 7.2 0.39 11.7 7.2 1.1 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal PMSI1 PF15322.6 NODE_57683_length_292_cov_50.533074_g49744_i0reverse_frame_3 - 4.3 6.7 7.7 4.9 6.5 7.7 1.0 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative TSGP1 PF07771.11 NODE_57681_length_292_cov_52.817121_g49742_i0reverse_frame_3 - 0.12 12.5 1.0 0.16 12.1 1.0 1.2 1 0 0 1 1 1 0 Tick salivary peptide group 1 DUF3937 PF13073.6 NODE_57680_length_292_cov_52.902724_g49741_i0forward_frame_3 - 0.13 12.4 1.6 0.21 11.7 1.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3937) Deltameth_res PF16020.5 NODE_57680_length_292_cov_52.902724_g49741_i0forward_frame_2 - 0.032 14.1 0.8 0.05 13.5 0.8 1.3 1 0 0 1 1 1 0 Deltamethrin resistance YqzE PF14038.6 NODE_57679_length_292_cov_55.202335_g49740_i0reverse_frame_2 - 4.4 7.4 7.6 1 9.5 0.7 2.2 2 0 0 2 2 2 0 YqzE-like protein Fimbrial_K88 PF02432.15 NODE_57671_length_292_cov_65.723735_g49732_i0forward_frame_2 - 0.058 13.4 0.0 0.07 13.1 0.0 1.1 1 0 0 1 1 1 0 Fimbrial, major and minor subunit ICAP-1_inte_bdg PF10480.9 NODE_57671_length_292_cov_65.723735_g49732_i0forward_frame_2 - 0.57 10.1 2.7 0.63 10.0 2.7 1.1 1 0 0 1 1 1 0 Beta-1 integrin binding protein zf-C2H2 PF00096.26 NODE_57660_length_292_cov_80.486381_g49721_i0reverse_frame_3 - 2.4 8.8 8.0 14 6.4 0.3 3.2 3 0 0 3 3 3 0 Zinc finger, C2H2 type CDV3 PF15359.6 NODE_57657_length_292_cov_94.766537_g49718_i0reverse_frame_2 - 0.19 12.2 4.6 0.23 11.9 4.6 1.1 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 KSHV_K8 PF07188.11 NODE_57655_length_292_cov_99.303502_g49716_i0forward_frame_3 - 0.06 12.7 0.1 0.067 12.6 0.1 1.0 1 0 0 1 1 1 0 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein WND PF07861.11 NODE_57654_length_292_cov_99.704280_g49715_i0forward_frame_2 - 0.023 14.1 0.0 0.029 13.8 0.0 1.2 1 0 0 1 1 1 0 WisP family N-Terminal Region His_Phos_1 PF00300.22 NODE_57653_length_292_cov_111.529183_g49714_i0forward_frame_2 - 0.0066 16.2 0.0 0.0073 16.0 0.0 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Tim29 PF10171.9 NODE_57653_length_292_cov_111.529183_g49714_i0forward_frame_2 - 0.045 13.3 0.0 0.055 13.0 0.0 1.1 1 0 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 Thg1C PF14413.6 NODE_57648_length_292_cov_130.299611_g49709_i0reverse_frame_2 - 0.074 13.2 0.4 0.089 12.9 0.4 1.1 1 0 0 1 1 1 0 Thg1 C terminal domain Spore_YpjB PF09577.10 NODE_57647_length_292_cov_142.287938_g49708_i0reverse_frame_2 - 0.027 14.3 0.2 0.031 14.1 0.2 1.1 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) DUF4972 PF16342.5 NODE_57644_length_292_cov_156.914397_g49705_i0reverse_frame_2 - 0.058 13.1 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) Vps53_N PF04100.12 NODE_57644_length_292_cov_156.914397_g49705_i0forward_frame_2 - 1.6e-06 27.4 0.1 2.2e-06 26.9 0.1 1.2 1 0 0 1 1 1 1 Vps53-like, N-terminal Importin_rep_2 PF18786.1 NODE_57644_length_292_cov_156.914397_g49705_i0forward_frame_2 - 0.15 12.0 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Importin 13 repeat ATP-synt_Eps PF04627.13 NODE_57640_length_292_cov_293.813230_g49701_i0forward_frame_2 - 0.0098 15.9 0.9 0.012 15.6 0.0 1.6 2 0 0 2 2 2 1 Mitochondrial ATP synthase epsilon chain Nodulin_late PF07127.11 NODE_57639_length_292_cov_619.319066_g49700_i0forward_frame_3 - 0.049 14.0 0.1 0.074 13.4 0.1 1.3 1 0 0 1 1 1 0 Late nodulin protein Cadherin_tail PF15974.5 NODE_57638_length_292_cov_714.369650_g49699_i0reverse_frame_3 - 0.022 15.1 0.7 0.026 14.9 0.7 1.2 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region Melittin PF01372.17 NODE_57635_length_292_cov_1709.657588_g49696_i0reverse_frame_2 - 3.1 7.9 5.1 11 6.2 0.5 2.5 2 0 0 2 2 2 0 Melittin DUF735 PF05246.11 NODE_57633_length_293_cov_0.992248_g49694_i0forward_frame_2 - 0.057 13.4 1.4 0.061 13.3 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF735) ShK PF01549.24 NODE_57632_length_293_cov_1.007752_g49693_i0reverse_frame_2 - 0.0081 16.7 7.0 0.014 15.9 0.8 2.5 1 1 1 2 2 2 2 ShK domain-like ZF-HD_dimer PF04770.12 NODE_57632_length_293_cov_1.007752_g49693_i0reverse_frame_2 - 0.54 10.6 6.0 0.25 11.7 0.8 2.0 2 0 0 2 2 2 0 ZF-HD protein dimerisation region Phage_holin_4_2 PF04020.13 NODE_57631_length_293_cov_1.085271_g49692_i0reverse_frame_3 - 0.73 10.5 6.9 0.35 11.6 5.1 1.6 1 1 1 2 2 2 0 Mycobacterial 4 TMS phage holin, superfamily IV CHZ PF09649.10 NODE_57626_length_293_cov_1.298450_g49687_i0reverse_frame_2 - 0.14 11.7 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Histone chaperone domain CHZ CENP-T_C PF15511.6 NODE_57622_length_293_cov_1.608527_g49683_i0reverse_frame_2 - 0.00094 19.3 0.0 0.0011 19.1 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold Histone PF00125.24 NODE_57622_length_293_cov_1.608527_g49683_i0reverse_frame_2 - 0.011 16.2 0.0 0.013 15.9 0.0 1.1 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 CdiI_N PF18228.1 NODE_57621_length_293_cov_1.620155_g49682_i0reverse_frame_3 - 0.058 13.2 0.7 0.073 12.9 0.7 1.2 1 0 0 1 1 1 0 CdiI N-terminal domain DUF5461 PF17545.2 NODE_57619_length_293_cov_1.693798_g49680_i0reverse_frame_3 - 0.0065 16.8 0.1 0.0081 16.4 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5461) Syndecan PF01034.20 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.0012 18.8 0.6 0.0018 18.2 0.6 1.3 1 0 0 1 1 1 1 Syndecan domain DUF5305 PF17231.2 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.015 14.7 0.2 0.018 14.5 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Baculo_11_kDa PF06143.11 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.12 12.0 4.3 0.18 11.4 4.3 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family YrhK PF14145.6 NODE_57618_length_293_cov_1.705426_g49679_i0forward_frame_2 - 0.081 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 YrhK-like protein TSC22 PF01166.18 NODE_57615_length_293_cov_1.837209_g49676_i0reverse_frame_3 - 0.1 12.9 5.3 2.4 8.5 0.2 2.2 1 1 1 2 2 2 0 TSC-22/dip/bun family Cep57_CLD_2 PF14197.6 NODE_57615_length_293_cov_1.837209_g49676_i0reverse_frame_3 - 0.27 11.4 4.7 1.2 9.3 4.5 1.9 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 ZapB PF06005.12 NODE_57615_length_293_cov_1.837209_g49676_i0reverse_frame_3 - 0.36 11.3 7.4 0.5 10.8 7.4 1.2 1 0 0 1 1 1 0 Cell division protein ZapB PCSK9_C2 PF18464.1 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_3 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain AAA PF00004.29 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 6.3e-24 84.9 0.0 7.4e-24 84.7 0.0 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 1.5e-05 24.8 0.0 2.7e-05 24.0 0.0 1.4 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 1.8e-05 25.0 0.2 0.0041 17.4 0.0 2.1 1 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 3.6e-05 24.2 0.2 0.0037 17.7 0.1 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 4.9e-05 23.3 0.1 0.00023 21.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Bac_DnaA PF00308.18 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.00017 21.5 0.0 0.00021 21.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial dnaA protein IstB_IS21 PF01695.17 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.00027 20.7 0.0 0.0003 20.6 0.0 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein ATPase PF06745.13 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.00074 18.9 0.3 0.36 10.1 0.0 2.0 1 1 1 2 2 2 2 KaiC Sigma54_activat PF00158.26 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0019 17.9 0.1 0.17 11.5 0.0 2.1 1 1 0 2 2 2 1 Sigma-54 interaction domain AAA_18 PF13238.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0042 17.6 0.1 0.005 17.4 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0053 16.5 0.1 0.0099 15.6 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.14 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0058 16.8 0.0 0.05 13.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) TsaE PF02367.17 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0063 16.5 0.1 0.0097 15.9 0.1 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_14 PF13173.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0079 16.2 0.0 0.0098 15.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0087 15.3 0.1 0.013 14.7 0.1 1.4 1 1 0 1 1 1 1 TIP49 P-loop domain AAA_7 PF12775.7 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0098 15.4 0.1 0.052 13.1 0.1 1.9 1 1 0 1 1 1 1 P-loop containing dynein motor region NACHT PF05729.12 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.013 15.4 0.1 0.03 14.3 0.0 1.5 1 1 1 2 2 2 0 NACHT domain Mg_chelatase PF01078.21 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.013 14.9 0.3 0.042 13.2 0.2 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.033 14.3 0.0 0.038 14.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.045 14.2 0.0 0.048 14.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.053 13.9 0.0 0.11 12.9 0.0 1.5 1 1 1 2 2 2 0 RNA helicase NTPase_1 PF03266.15 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.062 13.2 0.1 3 7.7 0.0 2.0 1 1 1 2 2 2 0 NTPase ABC_tran PF00005.27 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.1 13.1 0.1 0.16 12.5 0.1 1.3 1 0 0 1 1 1 0 ABC transporter PduV-EutP PF10662.9 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_25 PF13481.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.16 11.5 0.1 0.24 10.9 0.1 1.4 1 1 0 1 1 1 0 AAA domain PhoH PF02562.16 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.18 11.2 0.6 1.3 8.4 0.2 1.9 2 0 0 2 2 2 0 PhoH-like protein AAA_3 PF07726.11 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.19 11.6 0.0 0.22 11.4 0.0 1.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.21 11.0 0.1 11 5.4 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein Autophagy_act_C PF03987.15 NODE_57611_length_293_cov_1.906977_g49672_i0forward_frame_2 - 0.068 13.8 1.2 0.09 13.4 1.2 1.5 1 1 0 1 1 1 0 Autophagocytosis associated protein, active-site domain zf-LITAF-like PF10601.9 NODE_57610_length_293_cov_1.922481_g49671_i0reverse_frame_3 - 0.18 12.1 5.3 0.19 12.0 3.8 1.7 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain ORC3_N PF07034.11 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 0.14 11.2 1.2 0.15 11.1 1.2 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 3 N-terminus ABC_tran PF00005.27 NODE_57608_length_293_cov_1.937984_g49669_i0reverse_frame_2 - 3.2e-07 30.9 0.0 3.5e-07 30.8 0.0 1.0 1 0 0 1 1 1 1 ABC transporter SR-25 PF10500.9 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_3 - 1.5 8.4 12.1 1.5 8.4 12.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein SP_C-Propep PF08999.10 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_2 - 0.055 13.2 1.4 0.073 12.9 1.4 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide Lebercilin PF15619.6 NODE_57600_length_293_cov_2.166667_g49661_i0forward_frame_2 - 0.017 14.8 8.9 0.035 13.8 8.9 1.5 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease L31 PF09784.9 NODE_57600_length_293_cov_2.166667_g49661_i0forward_frame_2 - 0.027 14.9 3.2 0.032 14.7 3.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 DUF5551 PF17705.1 NODE_57599_length_293_cov_2.170543_g49660_i0reverse_frame_2 - 0.2 11.3 2.7 0.29 10.7 2.7 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5551) TrwC PF08751.11 NODE_57599_length_293_cov_2.170543_g49660_i0forward_frame_3 - 0.11 12.0 0.2 0.12 11.8 0.2 1.0 1 0 0 1 1 1 0 TrwC relaxase DUF1180 PF06679.12 NODE_57594_length_293_cov_2.321705_g49655_i0reverse_frame_2 - 0.18 12.2 3.3 0.2 12.1 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) IQ PF00612.27 NODE_57592_length_293_cov_2.387597_g49653_i0reverse_frame_2 - 0.00053 19.6 1.0 0.00093 18.8 1.0 1.4 1 0 0 1 1 1 1 IQ calmodulin-binding motif Pkinase PF00069.25 NODE_57591_length_293_cov_2.403101_g49652_i0reverse_frame_2 - 6e-27 94.7 0.0 6.6e-27 94.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57591_length_293_cov_2.403101_g49652_i0reverse_frame_2 - 1.4e-11 44.2 0.0 1.5e-11 44.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_57591_length_293_cov_2.403101_g49652_i0reverse_frame_2 - 0.0018 17.7 0.0 0.002 17.5 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Leu_leader PF08054.11 NODE_57588_length_293_cov_2.476744_g49649_i0forward_frame_3 - 0.36 10.5 0.2 0.36 10.5 0.2 1.9 3 0 0 3 3 3 0 Leucine operon leader peptide PapD_C PF02753.17 NODE_57587_length_293_cov_2.480620_g49648_i0forward_frame_2 - 2.6e-11 43.7 0.5 4.2e-11 43.0 0.5 1.3 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain TetR_C_17 PF17922.1 NODE_57585_length_293_cov_2.538760_g49646_i0reverse_frame_3 - 0.013 15.6 0.1 0.016 15.3 0.1 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Nt_Gln_amidase PF09764.9 NODE_57585_length_293_cov_2.538760_g49646_i0reverse_frame_2 - 0.09 12.4 0.4 0.12 11.9 0.4 1.3 1 1 0 1 1 1 0 N-terminal glutamine amidase RVT_1 PF00078.27 NODE_57580_length_293_cov_2.674419_g49641_i0reverse_frame_2 - 3.2e-09 36.6 0.0 3.6e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Iron_traffic PF04362.14 NODE_57577_length_293_cov_2.810078_g49638_i0reverse_frame_3 - 0.045 13.5 0.2 0.061 13.0 0.2 1.2 1 0 0 1 1 1 0 Bacterial Fe(2+) trafficking DNA_pol_B PF00136.21 NODE_57577_length_293_cov_2.810078_g49638_i0reverse_frame_2 - 7.4e-05 21.6 0.0 9.4e-05 21.3 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase family B WD40 PF00400.32 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 6.6e-15 55.3 4.2 1.8e-05 25.4 0.1 3.1 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 9.9e-10 38.6 0.7 0.00029 21.1 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 1.3e-06 27.4 0.4 0.018 13.7 0.0 2.0 1 1 1 2 2 2 2 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 0.032 13.2 1.1 0.17 10.8 0.1 2.0 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Nucleoporin_N PF08801.11 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 0.04 12.7 0.1 0.32 9.7 0.1 1.9 1 1 1 2 2 2 0 Nup133 N terminal like DUF2418 PF10332.9 NODE_57575_length_293_cov_2.945736_g49636_i0forward_frame_2 - 3.3 8.3 7.1 4.4 7.9 5.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2418) Lip_A_acyltrans PF03279.13 NODE_57573_length_293_cov_3.124031_g49634_i0reverse_frame_2 - 0.00023 20.5 0.0 0.00028 20.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase CoA_transf_3 PF02515.17 NODE_57571_length_293_cov_3.360465_g49632_i0reverse_frame_2 - 3.7e-28 98.7 0.4 3.9e-28 98.6 0.4 1.0 1 0 0 1 1 1 1 CoA-transferase family III MiAMP1 PF09117.10 NODE_57571_length_293_cov_3.360465_g49632_i0forward_frame_2 - 0.0032 17.7 0.4 0.0043 17.2 0.4 1.2 1 0 0 1 1 1 1 MiAMP1 Chordopox_A30L PF06015.12 NODE_57567_length_293_cov_3.899225_g49628_i0reverse_frame_3 - 0.0037 17.1 0.2 0.0053 16.6 0.2 1.3 1 0 0 1 1 1 1 Chordopoxvirus A30L protein PRKCSH-like PF12999.7 NODE_57567_length_293_cov_3.899225_g49628_i0reverse_frame_2 - 0.08 12.7 1.3 0.091 12.6 1.3 1.1 1 0 0 1 1 1 0 Glucosidase II beta subunit-like Ribosomal_L36 PF00444.18 NODE_57567_length_293_cov_3.899225_g49628_i0reverse_frame_2 - 3.3 8.0 9.7 0.63 10.3 0.9 2.9 3 0 0 3 3 3 0 Ribosomal protein L36 Ribosomal_L31 PF01197.18 NODE_57566_length_293_cov_3.906977_g49627_i0forward_frame_2 - 8.9e-14 51.5 0.0 1.3e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L31 Toxin_37 PF11415.8 NODE_57564_length_293_cov_4.255814_g49625_i0reverse_frame_2 - 0.14 12.0 0.2 0.14 12.0 0.2 2.2 2 0 0 2 2 2 0 Antifungal peptide termicin SatD PF16264.5 NODE_57557_length_293_cov_34.531008_g49618_i0reverse_frame_2 - 0.024 14.2 0.6 0.027 14.1 0.6 1.0 1 0 0 1 1 1 0 SatD family (SatD) Penaeidin PF05927.11 NODE_57549_length_293_cov_52.786822_g49610_i0reverse_frame_3 - 0.039 14.7 0.1 0.057 14.2 0.1 1.3 1 0 0 1 1 1 0 Penaeidin zf-CDGSH PF09360.10 NODE_57546_length_293_cov_59.848837_g49607_i0reverse_frame_3 - 0.13 12.5 0.6 0.23 11.7 0.6 1.4 1 0 0 1 1 1 0 Iron-binding zinc finger CDGSH type CC PF04942.14 NODE_57546_length_293_cov_59.848837_g49607_i0forward_frame_2 - 0.088 13.0 0.2 0.23 11.7 0.0 1.7 2 0 0 2 2 2 0 CC domain FOXO_KIX_bdg PF16675.5 NODE_57544_length_293_cov_64.023256_g49605_i0reverse_frame_3 - 0.091 13.1 0.4 0.12 12.6 0.4 1.2 1 0 0 1 1 1 0 KIX-binding domain of forkhead box O, CR2 Glyco_hydro_20b PF02838.15 NODE_57544_length_293_cov_64.023256_g49605_i0forward_frame_3 - 0.064 14.0 0.0 0.064 14.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, domain 2 NP1-WLL PF11733.8 NODE_57541_length_293_cov_68.523256_g49602_i0reverse_frame_3 - 0.0096 15.7 2.5 0.011 15.5 2.5 1.0 1 0 0 1 1 1 1 Non-capsid protein NP1 CYTH PF01928.21 NODE_57541_length_293_cov_68.523256_g49602_i0forward_frame_2 - 0.0001 22.3 0.0 0.0001 22.3 0.0 1.0 1 0 0 1 1 1 1 CYTH domain P_proprotein PF01483.20 NODE_57541_length_293_cov_68.523256_g49602_i0forward_frame_2 - 0.14 12.2 0.2 0.18 11.9 0.2 1.2 1 0 0 1 1 1 0 Proprotein convertase P-domain Lys PF00062.20 NODE_57538_length_293_cov_80.496124_g49599_i0reverse_frame_3 - 0.038 14.2 0.0 0.046 14.0 0.0 1.1 1 0 0 1 1 1 0 C-type lysozyme/alpha-lactalbumin family DUF1263 PF06882.12 NODE_57537_length_293_cov_81.096899_g49598_i0reverse_frame_3 - 0.066 13.3 0.1 0.17 12.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1263) TPD52 PF04201.15 NODE_57532_length_293_cov_102.453488_g49593_i0reverse_frame_2 - 0.042 13.5 0.0 0.057 13.0 0.0 1.1 1 0 0 1 1 1 0 Tumour protein D52 family TAF1D PF15333.6 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_3 - 0.074 12.8 4.8 0.079 12.7 4.8 1.1 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D SRX PF09201.10 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_2 - 0.023 14.5 0.9 0.028 14.3 0.9 1.1 1 0 0 1 1 1 0 SRX, signal recognition particle receptor alpha subunit Phospholamban PF04272.14 NODE_57526_length_293_cov_120.844961_g49587_i0forward_frame_3 - 3.1 7.3 10.8 7.1 6.2 1.3 2.3 2 0 0 2 2 2 0 Phospholamban tRNA_U5-meth_tr PF05958.11 NODE_57524_length_293_cov_137.379845_g49585_i0reverse_frame_3 - 1.9e-06 27.1 0.0 2.3e-06 26.9 0.0 1.0 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase ARL17 PF15840.5 NODE_57519_length_293_cov_325.325581_g49580_i0reverse_frame_3 - 0.081 13.3 0.1 0.12 12.7 0.1 1.5 1 0 0 1 1 1 0 ADP-ribosylation factor-like protein 17 UPF1_Zn_bind PF09416.10 NODE_57514_length_293_cov_59889.635659_g49575_i0forward_frame_2 - 0.013 15.5 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) Ycf1 PF05758.12 NODE_57513_length_294_cov_0.926641_g49574_i0reverse_frame_3 - 0.8 7.5 4.7 0.81 7.5 4.7 1.0 1 0 0 1 1 1 0 Ycf1 DUF4714 PF15833.5 NODE_57513_length_294_cov_0.926641_g49574_i0forward_frame_2 - 0.13 12.2 0.3 0.29 11.1 0.3 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4714) DUF5439 PF17507.2 NODE_57510_length_294_cov_1.135135_g49571_i0reverse_frame_3 - 0.031 14.5 1.4 0.052 13.8 0.9 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5439) DUF872 PF05915.12 NODE_57510_length_294_cov_1.135135_g49571_i0forward_frame_3 - 0.063 13.5 0.1 0.07 13.3 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) DnaJ PF00226.31 NODE_57508_length_294_cov_1.301158_g49569_i0reverse_frame_2 - 4.3e-06 26.8 0.0 6.6e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain Urocanase PF01175.18 NODE_57505_length_294_cov_1.386100_g49566_i0reverse_frame_2 - 0.16 11.6 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Urocanase Rossmann-like domain PAX PF00292.18 NODE_57504_length_294_cov_1.386100_g49565_i0forward_frame_2 - 0.13 12.2 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 'Paired box' domain DUF5473 PF17567.2 NODE_57502_length_294_cov_1.389961_g49563_i0reverse_frame_3 - 0.016 15.4 0.6 0.016 15.4 0.6 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5473) DUF3106 PF11304.8 NODE_57500_length_294_cov_1.413127_g49561_i0reverse_frame_2 - 0.039 14.4 2.7 0.053 14.0 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3106) Herpes_UL95 PF03038.14 NODE_57493_length_294_cov_1.501931_g49554_i0forward_frame_3 - 0.093 11.9 0.2 0.088 11.9 0.2 1.1 1 0 0 1 1 1 0 UL95 family RT_RNaseH PF17917.1 NODE_57489_length_294_cov_1.528958_g49550_i0reverse_frame_2 - 2.1e-06 28.0 0.0 2.4e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase DUF5344 PF17279.2 NODE_57488_length_294_cov_1.528958_g49549_i0reverse_frame_2 - 0.0087 16.6 0.4 0.015 15.8 0.1 1.6 2 0 0 2 2 2 1 Family of unknown function (DUF5344) DUF5315 PF17242.2 NODE_57488_length_294_cov_1.528958_g49549_i0reverse_frame_2 - 0.045 13.6 0.2 0.06 13.2 0.2 1.3 1 1 0 1 1 1 0 Disordered region of unknown function (DUF5315) DUF4812 PF16071.5 NODE_57484_length_294_cov_1.629344_g49545_i0forward_frame_2 - 0.0018 18.0 0.4 1.2 9.0 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF4812) Cytomega_TRL10 PF06084.11 NODE_57481_length_294_cov_1.687259_g49542_i0reverse_frame_3 - 0.092 12.8 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein Toxin_15 PF07906.13 NODE_57475_length_294_cov_1.953668_g49536_i0forward_frame_3 - 4.3e-18 65.9 0.1 4.3e-18 65.9 0.1 1.0 1 0 0 1 1 1 1 ShET2 enterotoxin, N-terminal region TPR_8 PF13181.6 NODE_57473_length_294_cov_2.057915_g49534_i0reverse_frame_3 - 0.0086 16.2 0.7 0.014 15.5 0.7 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_57473_length_294_cov_2.057915_g49534_i0reverse_frame_3 - 0.0092 16.0 0.6 0.013 15.5 0.6 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat Pro_sub2 PF18513.1 NODE_57471_length_294_cov_2.135135_g49532_i0reverse_frame_3 - 0.018 15.2 1.5 0.018 15.2 1.5 1.4 1 1 1 2 2 2 0 Prodomain subtilisin 2 UvrA_inter PF17760.1 NODE_57468_length_294_cov_2.150579_g49529_i0forward_frame_3 - 0.051 13.7 0.0 0.07 13.2 0.0 1.4 1 1 0 1 1 1 0 UvrA interaction domain Adeno_terminal PF02459.15 NODE_57467_length_294_cov_2.150579_g49528_i0forward_frame_3 - 0.023 13.1 1.4 0.027 12.9 1.4 1.0 1 0 0 1 1 1 0 Adenoviral DNA terminal protein DUF2071 PF09844.9 NODE_57467_length_294_cov_2.150579_g49528_i0forward_frame_3 - 0.087 12.4 0.1 0.1 12.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (COG2071) DUF1492 PF07374.11 NODE_57467_length_294_cov_2.150579_g49528_i0forward_frame_2 - 0.021 15.0 0.5 0.038 14.1 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1492) EMP70 PF02990.16 NODE_57463_length_294_cov_2.189189_g49524_i0reverse_frame_2 - 0.15 10.7 0.1 0.16 10.6 0.1 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 SHIPPO-rpt PF07004.12 NODE_57463_length_294_cov_2.189189_g49524_i0reverse_frame_2 - 4.7 8.3 6.4 0.59 11.1 0.5 2.6 2 2 0 2 2 2 0 Sperm-tail PG-rich repeat DUF4212 PF13937.6 NODE_57463_length_294_cov_2.189189_g49524_i0forward_frame_3 - 0.044 14.2 3.5 0.053 13.9 3.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4212) PfkB PF00294.24 NODE_57459_length_294_cov_2.328185_g49520_i0forward_frame_3 - 4.6e-21 75.4 0.1 5e-21 75.3 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HTH_Tnp_IS630 PF01710.16 NODE_57459_length_294_cov_2.328185_g49520_i0forward_frame_3 - 0.1 12.7 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Transposase CCDC24 PF15669.5 NODE_57458_length_294_cov_2.355212_g49519_i0reverse_frame_2 - 0.001 19.0 0.1 0.0012 18.7 0.1 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 24 family FUSC-like PF12805.7 NODE_57458_length_294_cov_2.355212_g49519_i0reverse_frame_2 - 0.12 11.4 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS tRNA-synt_1_2 PF13603.6 NODE_57456_length_294_cov_2.393822_g49517_i0forward_frame_2 - 0.033 13.7 0.0 0.038 13.5 0.0 1.1 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 Flu_C_NS2 PF03555.14 NODE_57456_length_294_cov_2.393822_g49517_i0forward_frame_2 - 0.078 13.2 0.3 1.4 9.1 0.0 2.4 2 1 0 2 2 2 0 Influenza C non-structural protein (NS2) DUF3602 PF12223.8 NODE_57451_length_294_cov_2.849421_g49512_i0reverse_frame_3 - 0.062 13.9 3.6 0.091 13.4 3.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3602) DUF2142 PF09913.9 NODE_57451_length_294_cov_2.849421_g49512_i0forward_frame_2 - 0.18 10.6 2.7 0.2 10.5 2.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) RBD PF02196.15 NODE_57449_length_294_cov_3.007722_g49510_i0reverse_frame_2 - 0.065 13.3 0.1 0.77 9.9 0.1 2.2 1 1 0 1 1 1 0 Raf-like Ras-binding domain EptA_B_N PF08019.12 NODE_57448_length_294_cov_3.046332_g49509_i0reverse_frame_2 - 0.0033 17.3 1.1 0.0052 16.7 0.7 1.5 1 1 0 1 1 1 1 Phosphoethanolamine transferase EptA/EptB DUF2585 PF10755.9 NODE_57448_length_294_cov_3.046332_g49509_i0reverse_frame_2 - 0.006 16.3 0.1 0.007 16.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2585) Peptidase_S29 PF02907.15 NODE_57443_length_294_cov_17.027027_g49504_i0reverse_frame_2 - 0.001 18.8 0.0 0.001 18.8 0.0 1.1 1 0 0 1 1 1 1 Hepatitis C virus NS3 protease Stevor PF17410.2 NODE_57443_length_294_cov_17.027027_g49504_i0reverse_frame_2 - 0.0047 16.5 0.6 0.0057 16.2 0.6 1.0 1 0 0 1 1 1 1 Subtelomeric Variable Open Reading frame Holin_BhlA PF10960.8 NODE_57439_length_294_cov_26.737452_g49500_i0reverse_frame_3 - 4.9 7.2 8.9 7 6.7 1.8 2.7 3 0 0 3 3 3 0 BhlA holin family DUF2542 PF10808.8 NODE_57437_length_294_cov_36.737452_g49498_i0forward_frame_2 - 0.054 14.0 0.1 0.098 13.2 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2542) TOM6p PF15184.6 NODE_57430_length_294_cov_54.212355_g49491_i0forward_frame_3 - 0.14 12.0 0.2 0.21 11.4 0.2 1.4 1 0 0 1 1 1 0 Mitochondrial import receptor subunit TOM6 homolog DUF4283 PF14111.6 NODE_57430_length_294_cov_54.212355_g49491_i0forward_frame_2 - 0.086 12.4 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) Imm51 PF15595.6 NODE_57428_length_294_cov_57.660232_g49489_i0reverse_frame_3 - 0.0037 17.2 0.1 0.0047 16.8 0.1 1.2 1 0 0 1 1 1 1 Immunity protein 51 Sid-5 PF17204.3 NODE_57421_length_294_cov_67.305019_g49482_i0forward_frame_3 - 0.13 12.5 0.6 0.19 11.9 0.6 1.2 1 0 0 1 1 1 0 Sid-5 family C1_2 PF03107.16 NODE_57420_length_294_cov_68.764479_g49481_i0reverse_frame_3 - 0.0079 16.5 4.2 0.01 16.1 4.2 1.2 1 0 0 1 1 1 1 C1 domain zf-B_box PF00643.24 NODE_57420_length_294_cov_68.764479_g49481_i0reverse_frame_3 - 9.2 6.5 12.1 28 5.0 10.6 2.3 2 1 0 2 2 2 0 B-box zinc finger Toxin_8 PF07365.12 NODE_57420_length_294_cov_68.764479_g49481_i0forward_frame_3 - 0.065 13.4 0.7 0.1 12.8 0.7 1.3 1 0 0 1 1 1 0 Alpha conotoxin precursor zf-CXXC PF02008.20 NODE_57417_length_294_cov_74.374517_g49478_i0reverse_frame_2 - 0.57 10.3 7.4 6.8 6.8 7.4 2.3 1 1 0 1 1 1 0 CXXC zinc finger domain P2X_receptor PF00864.19 NODE_57417_length_294_cov_74.374517_g49478_i0forward_frame_2 - 0.13 11.3 1.6 0.16 11.0 1.6 1.0 1 0 0 1 1 1 0 ATP P2X receptor PilO PF04350.13 NODE_57416_length_294_cov_77.081081_g49477_i0reverse_frame_3 - 0.25 11.5 0.1 0.32 11.1 0.1 1.1 1 0 0 1 1 1 0 Pilus assembly protein, PilO Got1 PF04178.12 NODE_57414_length_294_cov_79.115830_g49475_i0forward_frame_3 - 0.11 12.9 0.1 0.14 12.6 0.1 1.1 1 0 0 1 1 1 0 Got1/Sft2-like family C1_1 PF00130.22 NODE_57414_length_294_cov_79.115830_g49475_i0forward_frame_2 - 0.37 10.7 5.7 0.76 9.7 5.7 1.6 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) WD40 PF00400.32 NODE_57412_length_294_cov_94.003861_g49473_i0reverse_frame_3 - 0.0014 19.4 0.2 0.58 11.1 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_57412_length_294_cov_94.003861_g49473_i0reverse_frame_3 - 0.09 13.1 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Chordopox_L2 PF05803.12 NODE_57408_length_294_cov_108.583012_g49469_i0reverse_frame_3 - 0.041 13.7 3.7 0.054 13.3 3.7 1.4 1 0 0 1 1 1 0 Chordopoxvirus L2 protein DUF5542 PF17696.1 NODE_57408_length_294_cov_108.583012_g49469_i0reverse_frame_3 - 0.79 9.9 3.2 0.61 10.3 2.3 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5542) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks245.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks245.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks245.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks245.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- OS-D PF03392.13 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 0.0055 16.8 3.3 0.75 9.9 0.7 2.3 2 0 0 2 2 2 2 Insect pheromone-binding family, A10/OS-D Vps36-NZF-N PF16988.5 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 0.0062 15.9 0.7 0.012 15.0 0.7 1.5 1 0 0 1 1 1 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain Sar8_2 PF03058.14 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 0.024 15.2 2.1 0.024 15.2 2.1 1.5 1 1 0 1 1 1 0 Sar8.2 family zf-Sec23_Sec24 PF04810.15 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 0.35 11.0 10.5 0.056 13.5 3.0 2.9 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger Zn_Tnp_IS1 PF03811.13 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 4 7.2 6.8 4.8 7.0 0.1 2.7 3 0 0 3 3 3 0 InsA N-terminal domain DUF2301 PF10063.9 NODE_57398_length_294_cov_248.389961_g49459_i0forward_frame_2 - 0.12 12.8 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized integral membrane protein (DUF2301) DUF2464 PF10240.9 NODE_57397_length_294_cov_490.749035_g49458_i0reverse_frame_3 - 0.14 11.7 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Multivesicular body subunit 12 fn2 PF00040.19 NODE_57393_length_294_cov_1290.667954_g49454_i0reverse_frame_2 - 0.099 12.9 1.2 0.17 12.2 1.2 1.4 1 0 0 1 1 1 0 Fibronectin type II domain E1_UFD PF09358.10 ORF98752 - 0.09 13.5 0.1 0.11 13.2 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin fold domain Baculo_LEF-10 PF07206.11 ORF98390 - 0.11 12.7 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 Baculovirus late expression factor 10 (LEF-10) SWIM PF04434.17 ORF98168 - 1.9 8.2 6.7 0.38 10.5 1.0 2.2 2 1 0 2 2 2 0 SWIM zinc finger Mlf1IP PF10248.9 ORF98151 - 0.14 12.1 4.4 0.17 11.9 4.4 1.1 1 0 0 1 1 1 0 Myelodysplasia-myeloid leukemia factor 1-interacting protein Fungal_lectin_2 PF18647.1 ORF96583 - 0.056 13.9 0.2 0.079 13.4 0.2 1.2 1 0 0 1 1 1 0 Alpha-galactosyl-binding fungal lectin DUF4710 PF15828.5 ORF96583 - 0.2 11.8 2.4 0.25 11.5 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DUF1542 PF07564.11 ORF96420 - 0.074 13.2 0.2 0.1 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1542) VIT1 PF01988.19 ORF96420 - 1.7 8.4 3.7 9.1 6.1 0.1 2.0 1 1 1 2 2 2 0 VIT family Peptidase_S74 PF13884.6 ORF95629 - 0.17 12.3 0.1 0.51 10.7 0.1 1.9 1 1 0 1 1 1 0 Chaperone of endosialidase DUF2854 PF11016.8 ORF95148 - 0.055 13.4 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) DUF126 PF01989.16 ORF94798 - 0.0059 16.4 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain MinE PF03776.14 ORF94729 - 6.7 6.8 10.1 1.9 8.6 4.5 2.2 1 1 1 2 2 2 0 Septum formation topological specificity factor MinE Toxin_38 PF14866.6 ORF94588 - 0.05 13.9 0.0 0.071 13.4 0.0 1.3 1 0 0 1 1 1 0 Potassium channel toxin PsbM PF05151.12 ORF94461 - 0.0018 18.0 0.1 0.0018 18.0 0.1 1.8 2 0 0 2 2 2 1 Photosystem II reaction centre M protein (PsbM) DUF4381 PF14316.6 ORF94461 - 0.01 16.1 0.1 0.01 16.1 0.1 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) DctQ PF04290.12 ORF94461 - 0.026 14.4 0.6 0.035 14.0 0.6 1.2 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component Bax1-I PF01027.20 ORF94461 - 0.1 12.4 1.2 0.18 11.6 1.2 1.3 1 1 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 PetL PF05115.14 ORF94461 - 0.21 11.6 4.3 0.38 10.7 4.3 1.4 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) E1-E2_ATPase PF00122.20 ORF94461 - 0.22 11.1 1.9 0.36 10.3 0.5 1.7 2 0 0 2 2 2 0 E1-E2 ATPase PPR_2 PF13041.6 ORF94345 - 0.077 13.2 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 PPR repeat family DUF2996 PF11210.8 ORF9421 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) AAA_10 PF12846.7 ORF93551 - 0.11 11.3 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain DUF1700 PF08006.11 ORF93108 - 0.0089 15.6 1.0 0.01 15.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) YrbL-PhoP_reg PF10707.9 ORF92740 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL DUF126 PF01989.16 ORF91780 - 0.0059 16.4 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain Lebercilin PF15619.6 ORF90496 - 0.0041 16.8 1.8 0.0043 16.7 1.8 1.2 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Pox_A_type_inc PF04508.12 ORF90496 - 0.0076 16.1 0.7 0.018 14.9 0.7 1.6 1 0 0 1 1 1 1 Viral A-type inclusion protein repeat MMR_HSR1_Xtn PF16897.5 ORF90496 - 0.011 15.7 1.5 0.026 14.5 1.4 1.7 1 1 1 2 2 2 0 C-terminal region of MMR_HSR1 domain DUF848 PF05852.11 ORF90496 - 0.022 14.9 1.9 0.025 14.7 1.9 1.1 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Med30 PF11315.8 ORF90496 - 0.024 14.8 3.4 0.097 12.9 3.4 1.8 1 1 0 1 1 1 0 Mediator complex subunit 30 TolA_bind_tri PF16331.5 ORF90496 - 0.034 14.2 2.0 0.034 14.2 2.0 1.8 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF724 PF05266.14 ORF90496 - 0.042 13.7 4.8 0.042 13.7 4.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DivIC PF04977.15 ORF90496 - 0.051 13.4 2.9 0.067 13.0 2.7 1.4 1 1 0 1 1 1 0 Septum formation initiator Nup54 PF13874.6 ORF90496 - 0.053 13.6 1.8 0.057 13.5 1.8 1.1 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 TssO PF17561.2 ORF90496 - 0.059 13.5 9.2 0.072 13.2 9.2 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO Atg14 PF10186.9 ORF90496 - 0.067 12.3 7.3 0.066 12.3 7.3 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Baculo_PEP_C PF04513.12 ORF90496 - 0.075 13.1 1.4 0.095 12.7 1.4 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus CC2-LZ PF16516.5 ORF90496 - 0.18 12.2 5.1 0.26 11.7 5.1 1.3 1 0 0 1 1 1 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator FlaC_arch PF05377.11 ORF90496 - 0.29 11.5 5.3 3.7 8.0 5.3 2.1 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) HEAT_2 PF13646.6 ORF90317 - 0.22 12.0 0.0 0.28 11.6 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats RmlD_sub_bind PF04321.17 ORF90058 - 0.14 11.2 1.0 0.16 11.1 1.0 1.1 1 0 0 1 1 1 0 RmlD substrate binding domain CAF1A PF12253.8 ORF89002 - 0.065 13.4 6.5 0.081 13.1 6.5 1.2 1 0 0 1 1 1 0 Chromatin assembly factor 1 subunit A HATPase_c PF02518.26 ORF88713 - 1.6e-12 48.0 0.1 1.8e-12 47.7 0.1 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF88713 - 0.0032 17.3 0.0 0.0041 16.9 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPHH PF16905.5 ORF87624 - 0.045 13.5 0.1 0.077 12.8 0.1 1.3 1 0 0 1 1 1 0 Voltage-dependent L-type calcium channel, IQ-associated Paf1 PF03985.13 ORF87036 - 0.26 10.3 7.8 0.27 10.2 7.8 1.0 1 0 0 1 1 1 0 Paf1 Auts2 PF15336.6 ORF87036 - 2.8 8.0 12.6 3.4 7.7 12.6 1.1 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein DUF1509 PF07420.11 ORF87036 - 5.5 5.9 11.6 5.2 5.9 11.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) MgtE PF01769.16 ORF86861 - 0.003 17.9 0.6 0.0034 17.8 0.6 1.1 1 0 0 1 1 1 1 Divalent cation transporter Ion_trans PF00520.31 ORF86861 - 0.0087 15.3 8.7 0.01 15.1 8.7 1.2 1 0 0 1 1 1 1 Ion transport protein THOC7 PF05615.13 ORF86626 - 0.0098 16.2 7.6 0.013 15.8 7.6 1.1 1 0 0 1 1 1 1 Tho complex subunit 7 DUF3322 PF11795.8 ORF86626 - 0.019 15.0 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) APG6_N PF17675.1 ORF86626 - 0.02 15.4 7.5 0.027 15.0 7.5 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region Seryl_tRNA_N PF02403.22 ORF86626 - 0.029 14.6 6.7 0.033 14.4 6.7 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Fzo_mitofusin PF04799.13 ORF86626 - 0.074 12.6 4.0 0.086 12.4 4.0 1.1 1 0 0 1 1 1 0 fzo-like conserved region FapA PF03961.13 ORF86626 - 0.3 9.6 6.2 0.37 9.3 6.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4140 PF13600.6 ORF86626 - 0.64 10.5 6.8 9.5 6.7 6.8 2.1 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) HALZ PF02183.18 ORF86626 - 1 9.7 11.1 5.5 7.3 1.8 2.5 1 1 1 2 2 2 0 Homeobox associated leucine zipper ZapB PF06005.12 ORF86626 - 1.1 9.8 13.9 2.1 8.8 10.2 2.1 1 1 0 1 1 1 0 Cell division protein ZapB DivIC PF04977.15 ORF86626 - 5.8 6.8 12.3 7.2 6.5 1.0 2.4 1 1 1 2 2 2 0 Septum formation initiator Fer4_21 PF14697.6 ORF86323 - 1e-18 67.2 11.3 1.3e-18 66.9 11.3 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 ORF86323 - 1.2e-10 40.7 18.0 2.2e-05 24.1 6.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 ORF86323 - 5.7e-09 36.4 35.6 1.4e-05 25.6 15.5 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF86323 - 9.9e-07 28.6 16.2 9.1e-06 25.5 1.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 ORF86323 - 6.1e-06 26.0 16.8 0.0018 18.3 2.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 ORF86323 - 6.8e-06 26.1 14.2 6.6e-05 22.9 13.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF86323 - 2e-05 24.7 25.1 0.00016 21.8 16.2 1.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF86323 - 0.0011 19.7 14.7 0.0072 17.1 1.9 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF86323 - 0.0017 18.8 13.6 0.085 13.4 4.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF86323 - 0.0021 18.5 16.1 0.0021 18.4 3.3 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 ORF86323 - 0.015 15.7 15.8 0.52 10.8 3.7 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF86323 - 0.025 15.5 13.7 0.036 15.0 1.9 2.3 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 ORF86323 - 1 10.0 15.0 4 8.0 1.9 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I HZS_alpha PF18582.1 ORF85522 - 0.16 12.5 0.0 0.17 12.4 0.0 1.2 1 0 0 1 1 1 0 Hydrazine synthase alpha subunit middle domain Aminotran_3 PF00202.21 ORF8479 - 0.014 14.1 0.9 0.015 14.0 0.9 1.0 1 0 0 1 1 1 0 Aminotransferase class-III Sigma70_r4 PF04545.16 ORF84446 - 0.023 14.2 0.1 0.048 13.2 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 DUF2063 PF09836.9 ORF84360 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain DUF126 PF01989.16 ORF84321 - 0.0059 16.4 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain RexB PF15968.5 ORF83744 - 7.8 7.0 12.0 1.6 9.2 4.1 2.1 1 1 1 2 2 2 0 Membrane-anchored ion channel, Abi component Gmx_para_CXXCG PF09535.10 ORF83562 - 0.017 14.4 2.2 0.024 13.9 1.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (Gmx_para_CXXCG) Seryl_tRNA_N PF02403.22 ORF83464 - 0.011 16.0 0.2 0.014 15.6 0.2 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain WGG PF10273.9 ORF83464 - 0.11 13.2 0.1 0.74 10.5 0.1 1.9 1 1 1 2 2 2 0 Pre-rRNA-processing protein TSR2 RTC PF01137.21 ORF8212 - 3.1e-21 75.6 0.0 3.2e-21 75.5 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase eIF-3c_N PF05470.12 ORF80852 - 0.046 12.0 4.5 0.053 11.8 4.5 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus DUF4734 PF15881.5 ORF80852 - 0.11 12.6 1.2 0.22 11.7 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4734) STAS_2 PF13466.6 ORF80651 - 4.4e-18 65.4 0.1 5.1e-18 65.2 0.1 1.1 1 0 0 1 1 1 1 STAS domain STAS PF01740.21 ORF80651 - 1.1e-05 25.0 0.0 1.4e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 STAS domain Cwf_Cwc_15 PF04889.12 ORF8056 - 0.76 9.5 18.2 0.95 9.2 18.2 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Di19_C PF14571.6 ORF8056 - 2.5 8.7 8.1 0.38 11.3 2.5 1.9 1 1 1 2 2 2 0 Stress-induced protein Di19, C-terminal NOA36 PF06524.12 ORF8056 - 2.6 7.3 15.4 2.9 7.1 15.4 1.1 1 0 0 1 1 1 0 NOA36 protein Adaptin_N PF01602.20 ORF7916 - 8.2e-18 64.3 1.9 8.7e-18 64.2 1.9 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Vac14_Fig4_bd PF11916.8 ORF78637 - 8.8e-08 32.0 0.1 1.2e-07 31.5 0.0 1.3 1 1 0 1 1 1 1 Vacuolar protein 14 C-terminal Fig4p binding Rep_fac_C PF08542.11 ORF78637 - 0.02 15.3 0.2 0.038 14.4 0.2 1.4 1 0 0 1 1 1 0 Replication factor C C-terminal domain IBP39 PF11422.8 ORF78637 - 0.044 13.5 0.5 0.051 13.3 0.5 1.1 1 0 0 1 1 1 0 Initiator binding protein 39 kDa YmgB PF10798.8 ORF78637 - 0.067 13.0 0.2 0.13 12.1 0.2 1.5 1 0 0 1 1 1 0 Biofilm development protein YmgB/AriR YppF PF14178.6 ORF78637 - 0.078 12.9 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 YppF-like protein Epimerase_2 PF02350.19 ORF77838 - 3.2e-36 124.9 0.0 3.5e-36 124.8 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glycos_transf_1 PF00534.20 ORF77838 - 0.0014 18.2 0.0 0.002 17.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF77838 - 0.046 14.1 0.0 0.069 13.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 COMM_domain PF07258.14 ORF77594 - 1e-10 41.6 0.0 1.3e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 COMM domain RasGAP PF00616.19 ORF77485 - 0.011 15.4 0.4 0.014 15.1 0.4 1.1 1 0 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase Spem1 PF15670.5 ORF76504 - 1.8 8.1 13.9 1.9 8.0 13.9 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 L-fibroin PF05849.11 ORF75597 - 0.041 13.2 0.1 0.046 13.0 0.1 1.0 1 0 0 1 1 1 0 Fibroin light chain (L-fibroin) HlyD PF00529.20 ORF75100 - 5e-05 23.1 0.0 7.5e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Methyltransf_10 PF05971.12 ORF75011 - 0.00018 21.0 0.0 0.00023 20.6 0.0 1.2 1 0 0 1 1 1 1 RNA methyltransferase DUF2854 PF11016.8 ORF74487 - 0.055 13.4 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) Roc PF08477.13 ORF72828 - 0.00018 21.7 0.7 0.0004 20.6 0.0 1.9 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF72828 - 0.0029 17.2 0.0 0.0055 16.3 0.0 1.4 1 0 0 1 1 1 1 Ras family FokI_C PF02980.16 ORF72828 - 0.074 13.1 2.4 0.092 12.8 2.4 1.1 1 0 0 1 1 1 0 Restriction endonuclease FokI, catalytic domain FeoB_N PF02421.18 ORF72828 - 0.078 12.5 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 Ferrous iron transport protein B AAA_22 PF13401.6 ORF72828 - 0.079 13.2 2.6 0.36 11.1 0.8 2.0 1 1 1 2 2 2 0 AAA domain MCM_bind PF09739.9 ORF72828 - 0.079 11.4 7.2 0.089 11.2 7.2 1.0 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor MMR_HSR1 PF01926.23 ORF72828 - 0.1 12.7 1.3 0.34 11.0 0.0 2.1 2 1 0 2 2 2 0 50S ribosome-binding GTPase Connexin PF00029.19 ORF72828 - 0.26 11.0 5.8 0.26 11.0 5.8 1.1 1 0 0 1 1 1 0 Connexin TMPIT PF07851.13 ORF72828 - 0.69 9.1 5.5 0.82 8.9 5.5 1.0 1 0 0 1 1 1 0 TMPIT-like protein SRPRB PF09439.10 ORF72828 - 0.83 9.1 0.0 0.83 9.1 0.0 2.1 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit betaPIX_CC PF16523.5 ORF72828 - 0.94 9.3 21.0 1.2 9.1 12.0 2.1 1 1 1 2 2 2 0 betaPIX coiled coil Sec62 PF03839.16 ORF72828 - 3 7.3 7.8 3.2 7.2 7.8 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Presenilin PF01080.17 ORF72828 - 3.4 6.3 4.6 3.8 6.2 4.6 1.0 1 0 0 1 1 1 0 Presenilin EOS1 PF12326.8 ORF72828 - 4.8 7.1 5.4 6.5 6.6 5.4 1.2 1 0 0 1 1 1 0 N-glycosylation protein FTCD_C PF04961.12 ORF72828 - 7.3 6.3 6.8 9.4 5.9 6.8 1.2 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase DUF2063 PF09836.9 ORF72279 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain Methyltrn_RNA_2 PF04013.12 ORF71948 - 0.00028 20.6 0.1 0.00032 20.5 0.1 1.1 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase eIF-6 PF01912.18 ORF71948 - 0.029 13.8 0.0 0.034 13.5 0.0 1.1 1 0 0 1 1 1 0 eIF-6 family SpoVAE PF14097.6 ORF71948 - 0.13 11.9 0.4 3.4 7.3 0.1 2.0 1 1 1 2 2 2 0 Stage V sporulation protein AE1 HNF-1B_C PF04812.13 ORF71924 - 0.0048 16.8 0.2 0.005 16.7 0.2 1.0 1 0 0 1 1 1 1 Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus DUF1722 PF08349.11 ORF71747 - 0.018 15.3 1.1 0.021 15.1 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) WhiA_N PF10298.9 ORF71747 - 0.082 13.0 0.7 0.14 12.3 0.7 1.4 1 0 0 1 1 1 0 WhiA N-terminal LAGLIDADG-like domain Kri1 PF05178.12 ORF71471 - 0.34 11.5 6.1 0.5 10.9 6.1 1.2 1 0 0 1 1 1 0 KRI1-like family TPR_MLP1_2 PF07926.12 ORF71372 - 0.011 15.8 10.4 0.014 15.4 10.4 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein OmpH PF03938.14 ORF71372 - 0.012 15.9 9.4 0.015 15.7 9.4 1.0 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) phiKZ_IP PF12699.7 ORF71372 - 0.039 13.1 2.4 0.045 12.9 2.4 1.1 1 0 0 1 1 1 0 phiKZ-like phage internal head proteins Spc7 PF08317.11 ORF71372 - 0.04 12.8 7.3 0.043 12.7 7.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein COG2 PF06148.11 ORF71372 - 0.046 13.8 4.1 0.06 13.4 4.1 1.1 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 ApoLp-III PF07464.11 ORF71372 - 0.063 13.4 2.3 0.074 13.1 2.3 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) FliD_N PF02465.18 ORF71372 - 0.081 13.6 0.4 0.086 13.5 0.4 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus Bacillus_HBL PF05791.11 ORF71372 - 0.084 12.7 2.1 0.099 12.5 2.1 1.1 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) Jnk-SapK_ap_N PF09744.9 ORF71372 - 0.13 12.5 8.1 0.17 12.1 8.1 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Fib_alpha PF08702.10 ORF71372 - 0.14 12.3 1.9 0.18 12.0 1.9 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family HrpJ PF07201.11 ORF71372 - 0.16 12.3 12.3 0.31 11.4 12.3 1.5 1 1 0 1 1 1 0 HrpJ-like domain Atg14 PF10186.9 ORF71372 - 0.17 11.0 5.0 0.18 10.9 5.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Borrelia_P83 PF05262.11 ORF71372 - 0.73 8.2 5.0 0.72 8.3 5.0 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Tho2 PF11262.8 ORF71372 - 1.2 8.3 3.9 1.3 8.2 3.9 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 FUSC PF04632.12 ORF71372 - 2.2 6.7 7.6 2.2 6.7 7.6 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family TEX13 PF15186.6 ORF71372 - 2.8 7.6 9.8 3.3 7.4 9.8 1.1 1 0 0 1 1 1 0 Testis-expressed sequence 13 protein family KfrA_N PF11740.8 ORF71372 - 7.2 7.3 13.2 7.6 7.2 11.7 1.8 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term APG6_N PF17675.1 ORF71119 - 0.00039 21.0 19.0 0.00049 20.6 19.0 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region CENP-F_leu_zip PF10473.9 ORF71119 - 0.0004 20.4 16.5 0.0005 20.1 16.5 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Not3 PF04065.15 ORF71119 - 0.0041 16.6 8.1 0.0044 16.5 8.1 1.0 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component TMF_TATA_bd PF12325.8 ORF71119 - 0.0092 16.2 13.9 0.011 15.9 13.9 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding DUF3450 PF11932.8 ORF71119 - 0.012 14.9 17.8 0.013 14.8 17.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF2968 PF11180.8 ORF71119 - 0.012 15.2 16.4 0.015 14.9 16.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) SYCE1 PF15233.6 ORF71119 - 0.015 15.3 14.4 0.019 15.1 14.4 1.1 1 0 0 1 1 1 0 Synaptonemal complex central element protein 1 DUF4164 PF13747.6 ORF71119 - 0.035 14.4 9.7 0.043 14.1 8.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) GAS PF13851.6 ORF71119 - 0.04 13.3 14.7 0.045 13.1 14.7 1.1 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Paralemmin PF03285.15 ORF71119 - 0.046 13.3 10.2 0.048 13.2 10.2 1.0 1 0 0 1 1 1 0 Paralemmin SKA2 PF16740.5 ORF71119 - 0.062 13.1 13.2 0.081 12.7 13.2 1.2 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 PET PF06297.14 ORF71119 - 0.067 13.5 4.5 0.079 13.3 3.4 1.7 1 1 1 2 2 2 0 PET Domain YlqD PF11068.8 ORF71119 - 0.073 13.4 14.3 0.12 12.7 14.3 1.5 1 1 0 1 1 1 0 YlqD protein Peptidase_S46 PF10459.9 ORF71119 - 0.097 11.3 9.5 0.098 11.3 9.5 1.0 1 0 0 1 1 1 0 Peptidase S46 ADIP PF11559.8 ORF71119 - 0.11 12.5 14.5 0.18 11.9 14.4 1.4 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF3251 PF11622.8 ORF71119 - 0.16 11.6 4.5 0.095 12.3 2.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3251) KaiB PF07689.12 ORF71119 - 0.16 11.7 4.2 0.29 10.9 1.9 2.0 1 1 1 2 2 2 0 KaiB domain TMPIT PF07851.13 ORF71119 - 0.32 10.2 8.8 0.31 10.2 8.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein AAA_13 PF13166.6 ORF71119 - 0.42 9.2 9.0 0.47 9.0 9.0 1.1 1 0 0 1 1 1 0 AAA domain DUF2203 PF09969.9 ORF71119 - 0.44 11.3 6.1 0.57 10.9 6.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) FlxA PF14282.6 ORF71119 - 0.53 10.3 16.7 0.72 9.9 16.7 1.2 1 0 0 1 1 1 0 FlxA-like protein PRKG1_interact PF15898.5 ORF71119 - 0.6 11.0 12.1 0.73 10.8 12.1 1.1 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Seryl_tRNA_N PF02403.22 ORF71119 - 0.79 10.0 14.2 2.4 8.4 14.2 1.8 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain FapA PF03961.13 ORF71119 - 0.89 8.1 9.4 0.95 8.0 9.4 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A HAUS-augmin3 PF14932.6 ORF71119 - 0.95 9.0 14.7 1.1 8.7 14.7 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 CREPT PF16566.5 ORF71119 - 1.2 9.3 12.4 1.6 8.9 12.4 1.2 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour CENP-H PF05837.12 ORF71119 - 1.4 9.3 13.9 1.8 9.0 13.9 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) YabA PF06156.13 ORF71119 - 1.8 9.3 11.7 2.5 8.8 11.7 1.3 1 1 0 1 1 1 0 Initiation control protein YabA DUF737 PF05300.11 ORF71119 - 2.7 8.3 15.4 3.2 8.1 15.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) DUF3584 PF12128.8 ORF71119 - 2.8 5.4 16.1 2.9 5.3 16.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF812 PF05667.11 ORF71119 - 3 6.6 16.3 2.9 6.7 16.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Latarcin PF10279.9 ORF71119 - 3 8.3 6.9 3.5 8.1 6.3 1.5 1 1 0 1 1 1 0 Latarcin precursor HAUS6_N PF14661.6 ORF71119 - 3.7 7.1 11.3 4.4 6.8 11.3 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus FUSC PF04632.12 ORF71119 - 4.5 5.7 9.0 4.5 5.7 9.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family TEX13 PF15186.6 ORF71119 - 5.5 6.7 15.0 13 5.5 14.9 1.7 1 1 0 1 1 1 0 Testis-expressed sequence 13 protein family V_ATPase_I PF01496.19 ORF71119 - 6.2 4.6 8.7 7.3 4.4 8.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Spc24 PF08286.11 ORF71119 - 7.1 6.9 14.1 3.8e+02 1.4 14.1 2.1 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 Ank_5 PF13857.6 ORF7102 - 0.00029 21.1 0.0 0.00058 20.1 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF7102 - 0.00062 20.3 0.0 0.0013 19.3 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF7102 - 0.063 13.9 0.0 0.076 13.6 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) zf-C3HC4_3 PF13920.6 ORF7087 - 7e-16 57.8 13.1 8.6e-16 57.5 13.1 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF7087 - 1e-08 34.9 12.3 1.4e-08 34.5 12.3 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF7087 - 1e-06 28.9 13.6 1.4e-06 28.5 13.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF7087 - 5.5e-05 22.9 15.1 7.8e-05 22.4 15.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF7087 - 8.4e-05 22.4 12.0 0.00013 21.9 12.0 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF7087 - 0.0026 17.5 5.1 0.11 12.2 0.9 3.2 2 1 1 3 3 3 1 RING-like zinc finger zf-P11 PF03854.14 ORF7087 - 0.0094 15.6 10.2 0.014 15.0 10.2 1.2 1 0 0 1 1 1 1 P-11 zinc finger zf-RING_4 PF14570.6 ORF7087 - 0.33 10.8 11.0 0.8 9.5 11.0 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF1644 PF07800.12 ORF7087 - 7.7 6.5 11.7 5.7 7.0 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1644) Mito_carr PF00153.27 ORF70102 - 2.7e-18 65.7 0.0 3.1e-18 65.5 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein Roc PF08477.13 ORF70082 - 7e-13 48.9 0.0 8e-13 48.7 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF70082 - 5.6e-12 45.6 0.1 6.3e-12 45.4 0.1 1.0 1 0 0 1 1 1 1 Ras family Arf PF00025.21 ORF70082 - 1.2e-06 28.1 0.0 1.2e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF70082 - 8.7e-05 22.0 0.0 9.5e-05 21.9 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region AAA_7 PF12775.7 ORF70082 - 0.0056 16.2 0.0 0.01 15.3 0.0 1.5 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_24 PF13479.6 ORF70082 - 0.012 15.3 0.1 0.018 14.8 0.1 1.4 1 1 0 1 1 1 0 AAA domain G-alpha PF00503.20 ORF70082 - 0.014 14.6 0.2 0.031 13.4 0.0 1.6 1 1 1 2 2 2 0 G-protein alpha subunit AAA_22 PF13401.6 ORF70082 - 0.015 15.6 0.0 0.016 15.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 ORF70082 - 0.02 14.3 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF70082 - 0.036 13.6 0.1 0.14 11.7 0.1 1.7 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain ATPase PF06745.13 ORF70082 - 0.044 13.1 0.0 0.057 12.8 0.0 1.2 1 0 0 1 1 1 0 KaiC TniB PF05621.11 ORF70082 - 0.046 13.1 0.0 0.053 12.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein Sigma54_activat PF00158.26 ORF70082 - 0.052 13.2 0.0 0.064 13.0 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain MMR_HSR1 PF01926.23 ORF70082 - 0.073 13.2 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF70082 - 0.077 13.1 0.0 0.077 13.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF70082 - 0.13 12.0 0.6 0.28 10.9 0.1 1.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain Septin PF00735.18 ORF70082 - 0.13 11.5 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Septin IIGP PF05049.13 ORF70082 - 0.16 11.0 0.0 0.2 10.7 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) ABC_tran PF00005.27 ORF70082 - 0.19 12.2 0.1 0.39 11.2 0.1 1.4 1 1 0 1 1 1 0 ABC transporter oligo_HPY PF08352.12 ORF70071 - 5.2e-20 71.7 0.1 6.5e-20 71.4 0.1 1.1 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region DUF5604 PF18300.1 ORF69633 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5604) DUF3466 PF11949.8 ORF69531 - 0.015 13.9 0.1 0.016 13.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3466) PsbK PF02533.15 ORF69200 - 1.2e-20 73.4 6.5 2.4e-20 72.4 6.5 1.5 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component DUF4148 PF13663.6 ORF69200 - 1.1 9.5 6.3 2 8.6 6.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) DUF2996 PF11210.8 ORF68818 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) LRR_10 PF18805.1 ORF68225 - 0.054 13.2 0.0 0.099 12.3 0.0 1.4 1 0 0 1 1 1 0 Leucine-rich repeat DUF1700 PF08006.11 ORF669 - 0.0089 15.6 1.0 0.01 15.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) DUF4132 PF13569.6 ORF668 - 0.036 13.9 0.2 0.059 13.2 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4132) PHM7_cyt PF14703.6 ORF668 - 0.082 13.1 0.6 0.12 12.6 0.5 1.2 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter MinE PF03776.14 ORF668 - 0.093 12.7 0.4 0.94 9.5 0.1 2.2 2 0 0 2 2 2 0 Septum formation topological specificity factor MinE PQQ_3 PF13570.6 ORF66282 - 7e-05 23.2 1.3 0.00093 19.6 0.1 2.3 2 0 0 2 2 2 1 PQQ-like domain DUF2996 PF11210.8 ORF6620 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) DUF2063 PF09836.9 ORF6610 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain Como_SCP PF02248.16 ORF64616 - 0.0068 16.0 0.0 0.0085 15.7 0.0 1.2 1 0 0 1 1 1 1 Small coat protein Chlam_OMP PF01308.17 ORF64526 - 0.21 10.3 0.0 0.24 10.1 0.0 1.0 1 0 0 1 1 1 0 Chlamydia major outer membrane protein RTC PF01137.21 ORF64030 - 3.1e-21 75.6 0.0 3.2e-21 75.5 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase DUF1556 PF07590.11 ORF63759 - 0.063 13.6 1.0 0.075 13.3 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1556) FN3_7 PF18447.1 ORF63700 - 0.28 11.5 2.8 1.1 9.6 0.1 2.1 1 1 1 2 2 2 0 Fibronectin type III domain DUF126 PF01989.16 ORF63272 - 0.0059 16.4 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain Med26_M PF15694.5 ORF62476 - 0.01 15.9 1.2 0.01 15.9 1.2 1.0 1 0 0 1 1 1 0 Mediator complex subunit 26 middle domain HATPase_c PF02518.26 ORF62422 - 3.8e-06 27.4 0.0 6.3e-06 26.7 0.0 1.3 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DAO PF01266.24 ORF62344 - 6.2e-06 26.0 0.0 7.1e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF62344 - 0.00034 20.8 0.0 0.00043 20.5 0.0 1.2 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF62344 - 0.0017 17.6 0.0 0.002 17.4 0.0 1.1 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 ORF62344 - 0.004 16.2 0.0 0.004 16.2 0.0 1.1 1 0 0 1 1 1 1 Lycopene cyclase protein TonB_dep_Rec PF00593.24 ORF62344 - 0.0097 15.8 0.2 0.01 15.8 0.2 1.0 1 0 0 1 1 1 1 TonB dependent receptor DUF2063 PF09836.9 ORF61403 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain TAL_effector PF03377.13 ORF60846 - 0.13 12.6 0.6 15 6.0 0.1 2.3 2 0 0 2 2 2 0 TAL effector repeat DUF4559 PF15112.6 ORF60025 - 0.026 14.2 1.1 0.032 13.9 0.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4559) CBS PF00571.28 ORF59681 - 0.2 12.1 0.0 0.28 11.6 0.0 1.3 1 0 0 1 1 1 0 CBS domain Gon7 PF08738.10 ORF5944 - 0.04 14.0 0.0 0.05 13.7 0.0 1.1 1 0 0 1 1 1 0 Gon7 family Peptidase_C33 PF05412.12 ORF5944 - 0.064 13.3 0.0 0.093 12.8 0.0 1.4 1 1 0 1 1 1 0 Equine arterivirus Nsp2-type cysteine proteinase Citrate_synt PF00285.21 ORF59304 - 0.95 8.5 2.7 1 8.4 2.7 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain PseudoU_synth_1 PF01416.20 ORF5925 - 3.2e-11 43.6 0.0 4.1e-11 43.3 0.0 1.1 1 0 0 1 1 1 1 tRNA pseudouridine synthase DUF2436 PF10365.9 ORF59182 - 0.16 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2436) TAL_effector PF03377.13 ORF59013 - 0.13 12.6 0.6 15 6.0 0.1 2.3 2 0 0 2 2 2 0 TAL effector repeat DUF126 PF01989.16 ORF58890 - 0.0059 16.4 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain FlgM PF04316.13 ORF57726 - 1.6e-09 38.0 0.3 2.7e-09 37.3 0.3 1.5 1 1 0 1 1 1 1 Anti-sigma-28 factor, FlgM NMT PF01233.19 ORF57708 - 0.052 13.4 0.0 0.059 13.2 0.0 1.2 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain DUF2996 PF11210.8 ORF57457 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) RSS_P20 PF11757.8 ORF56264 - 0.0056 17.1 0.9 0.0056 17.1 0.9 1.5 2 0 0 2 2 2 1 Suppressor of RNA silencing P21-like N-terminal domain Phage_lysozyme PF00959.19 ORF55867 - 0.14 12.6 0.0 0.17 12.4 0.0 1.2 1 0 0 1 1 1 0 Phage lysozyme Pex14_N PF04695.13 ORF55183 - 0.066 13.9 1.9 0.08 13.6 1.9 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region MG1 PF17790.1 ORF5517 - 0.026 14.9 1.7 0.03 14.7 1.1 1.4 1 1 0 1 1 1 0 Macroglobulin domain MG1 MCPVI PF02993.14 ORF54001 - 0.76 9.6 5.0 0.94 9.3 5.0 1.1 1 0 0 1 1 1 0 Minor capsid protein VI Minor_capsid_3 PF12691.7 ORF52606 - 0.014 15.7 0.0 0.015 15.7 0.0 1.1 1 0 0 1 1 1 0 Minor capsid protein from bacteriophage DUF4234 PF14018.6 ORF52155 - 1 9.5 4.2 2.3 8.4 0.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4234) RPA43_OB PF17875.1 ORF51832 - 0.021 15.5 4.0 0.041 14.5 4.0 1.5 1 1 0 1 1 1 0 RPA43 OB domain in RNA Pol I DUF4922 PF16269.5 ORF51832 - 0.053 13.3 0.1 0.059 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4922) TRAM_LAG1_CLN8 PF03798.16 ORF51470 - 1.3e-07 31.5 3.4 1.5e-07 31.4 3.4 1.0 1 0 0 1 1 1 1 TLC domain NUMOD1 PF07453.13 ORF51467 - 0.053 13.8 0.2 0.14 12.4 0.0 1.8 2 0 0 2 2 2 0 NUMOD1 domain PsbL PF02419.17 ORF51394 - 1.3e-18 66.7 0.9 1.9e-18 66.2 0.9 1.2 1 0 0 1 1 1 1 PsbL protein G6PD_C PF02781.16 ORF51271 - 0.091 11.9 0.0 0.091 11.9 0.0 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, C-terminal domain DUF2063 PF09836.9 ORF50969 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain ABC_tran_CTD PF16326.5 ORF50918 - 0.031 14.5 0.3 0.044 14.0 0.3 1.3 1 0 0 1 1 1 0 ABC transporter C-terminal domain RSRP PF17069.5 ORF50900 - 1.2 8.6 15.3 1.3 8.6 15.3 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 zf-P11 PF03854.14 ORF50502 - 0.042 13.5 0.5 0.097 12.4 0.5 1.6 1 0 0 1 1 1 0 P-11 zinc finger Rh5 PF18515.1 ORF50013 - 0.0027 17.1 1.8 0.0029 16.9 1.8 1.1 1 0 0 1 1 1 1 Rh5 coiled-coil domain DUF2884 PF11101.8 ORF50013 - 0.012 15.2 0.1 0.013 15.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) zf-DNA_Pol PF08996.10 ORF49276 - 2.3e-07 30.8 0.4 2.6e-07 30.5 0.4 1.0 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger GerD PF17898.1 ORF48793 - 0.36 10.8 8.0 0.76 9.7 8.0 1.5 1 1 0 1 1 1 0 Spore germination GerD central core domain Carb_anhydrase PF00194.21 ORF48335 - 2.3e-11 43.7 0.5 2.7e-11 43.5 0.5 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DUF2996 PF11210.8 ORF48128 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) DUF2063 PF09836.9 ORF47649 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain DUF5604 PF18300.1 ORF47508 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5604) DUF2457 PF10446.9 ORF47099 - 1.3 8.1 4.1 1.3 8.1 4.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) CKAP2_C PF15297.6 ORF46402 - 0.00017 20.8 5.4 0.00019 20.7 5.4 1.0 1 0 0 1 1 1 1 Cytoskeleton-associated protein 2 C-terminus DUF4291 PF14124.6 ORF46402 - 0.082 12.8 0.3 0.098 12.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4291) GalP_UDP_tr_C PF02744.17 ORF45823 - 0.045 13.5 0.1 0.054 13.2 0.1 1.2 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain DUF126 PF01989.16 ORF45571 - 0.0059 16.4 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain BRAP2 PF07576.12 ORF44018 - 0.034 14.4 0.9 0.04 14.2 0.9 1.1 1 0 0 1 1 1 0 BRCA1-associated protein 2 DUF4441 PF14536.6 ORF44018 - 0.043 14.0 0.7 0.052 13.7 0.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) DUF1700 PF08006.11 ORF43750 - 0.0089 15.6 1.0 0.01 15.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) BcsB PF03170.13 ORF43431 - 0.087 11.2 0.0 0.093 11.1 0.0 1.0 1 0 0 1 1 1 0 Bacterial cellulose synthase subunit Acyl-CoA_dh_M PF02770.19 ORF42819 - 0.14 12.4 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain GYF PF02213.16 ORF42813 - 0.053 13.2 0.0 0.083 12.6 0.0 1.3 1 0 0 1 1 1 0 GYF domain PIR PF00399.19 ORF42571 - 0.11 12.1 1.4 0.21 11.2 1.4 1.5 1 0 0 1 1 1 0 Yeast PIR protein repeat Tmemb_161AB PF10268.9 ORF42098 - 0.083 11.5 9.4 0.09 11.4 9.4 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB PHO4 PF01384.20 ORF42098 - 7.2 5.5 7.4 8 5.4 7.4 1.2 1 0 0 1 1 1 0 Phosphate transporter family DUF2854 PF11016.8 ORF41728 - 0.055 13.4 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) CUTL PF16557.5 ORF41650 - 0.089 13.0 0.4 0.13 12.5 0.4 1.2 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB DUF126 PF01989.16 ORF41109 - 0.0059 16.4 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain DUF4122 PF13498.6 ORF40924 - 0.01 15.6 0.3 0.012 15.3 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4122) SH3BGR PF04908.15 ORF40534 - 0.061 13.5 0.0 0.071 13.3 0.0 1.2 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein Phage_GP20 PF06810.11 ORF40178 - 0.015 15.1 0.9 0.019 14.8 0.9 1.1 1 0 0 1 1 1 0 Phage minor structural protein GP20 Fib_alpha PF08702.10 ORF40178 - 0.016 15.4 0.6 0.018 15.2 0.6 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family FidL_like PF15941.5 ORF39957 - 0.063 13.7 0.0 0.091 13.2 0.0 1.3 1 0 0 1 1 1 0 FidL-like putative membrane protein Fis1_TPR_C PF14853.6 ORF39823 - 0.04 14.0 0.1 0.058 13.5 0.1 1.3 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat ABC_tran PF00005.27 ORF39762 - 9.6e-08 32.6 0.1 1.9e-07 31.7 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF39762 - 5.6e-05 22.7 0.3 7.1e-05 22.3 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain RabGAP-TBC PF00566.18 ORF39599 - 6.7e-25 88.0 2.5 7.3e-25 87.9 2.5 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain KorB_C PF06613.11 ORF39565 - 0.15 12.0 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 KorB C-terminal beta-barrel domain Cpn10 PF00166.21 ORF38175 - 3.8e-30 103.8 1.2 4.1e-30 103.7 1.2 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Phage_holin_3_5 PF16085.5 ORF36889 - 0.009 16.1 1.8 0.011 15.9 1.8 1.2 1 0 0 1 1 1 1 Bacteriophage holin Hol, superfamily III P22_Cro PF14549.6 ORF36777 - 0.13 12.1 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro Pox_A_type_inc PF04508.12 ORF36406 - 0.62 10.0 3.0 1.8 8.6 0.3 2.4 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat Ribosomal_L18_c PF14204.6 ORF36088 - 0.053 14.5 2.3 0.08 13.9 2.3 1.3 1 0 0 1 1 1 0 Ribosomal L18 C-terminal region CAAX_1 PF15895.5 ORF3590 - 0.045 13.7 0.5 0.046 13.6 0.5 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 DUF2996 PF11210.8 ORF35612 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) GRDP-like PF07173.12 ORF34741 - 0.037 14.7 2.1 0.16 12.6 0.1 2.4 1 1 2 3 3 3 0 Glycine-rich domain-containing protein-like DUF1796 PF08795.10 ORF34741 - 0.24 11.4 1.8 0.26 11.3 0.9 1.4 1 1 1 2 2 2 0 Putative papain-like cysteine peptidase (DUF1796) DUF2149 PF09919.9 ORF34696 - 4.8 7.5 5.0 0.9 9.8 0.5 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2149) Yae1_N PF09811.9 ORF34400 - 0.0022 17.7 2.2 0.0034 17.1 2.2 1.3 1 0 0 1 1 1 1 Essential protein Yae1, N terminal Viral_coat PF00729.18 ORF33844 - 0.051 13.4 0.0 0.058 13.2 0.0 1.1 1 0 0 1 1 1 0 Viral coat protein (S domain) U-box PF04564.15 ORF32817 - 3.2e-11 43.2 0.2 4.6e-11 42.7 0.2 1.2 1 0 0 1 1 1 1 U-box domain Hemerythrin PF01814.23 ORF32008 - 0.011 16.3 0.0 0.016 15.8 0.0 1.3 1 0 0 1 1 1 0 Hemerythrin HHE cation binding domain Nup54 PF13874.6 ORF32008 - 0.026 14.6 0.6 0.053 13.6 0.6 1.6 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 TMCO5 PF14992.6 ORF32008 - 0.11 12.1 0.2 0.11 12.0 0.2 1.0 1 0 0 1 1 1 0 TMCO5 family POC1 PF10450.9 ORF32008 - 0.13 11.2 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 POC1 chaperone FUSC PF04632.12 ORF32008 - 0.33 9.4 2.9 0.33 9.4 2.9 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF2063 PF09836.9 ORF31970 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain DUF4083 PF13314.6 ORF31075 - 0.091 12.7 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) DUF2788 PF10981.8 ORF31075 - 4.2 7.5 7.0 11 6.2 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2788) THEG PF14912.6 ORF30736 - 0.015 15.7 1.1 0.054 14.0 1.1 1.9 1 1 0 1 1 1 0 Testicular haploid expressed repeat JAB PF01398.21 ORF30207 - 8.9e-16 57.9 0.0 1e-15 57.8 0.0 1.0 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease UPF0172 PF03665.13 ORF30207 - 0.013 15.5 0.0 0.017 15.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) Prok-JAB PF14464.6 ORF30207 - 0.045 13.5 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic homologs of the JAB domain CspB_prodomain PF18425.1 ORF29758 - 0.036 14.1 0.2 0.046 13.7 0.2 1.2 1 0 0 1 1 1 0 Csp protease B prodomain DUF1690 PF07956.11 ORF28964 - 0.0051 17.2 0.7 0.0055 17.1 0.7 1.1 1 0 0 1 1 1 1 Protein of Unknown function (DUF1690) RPW8 PF05659.11 ORF28964 - 0.03 14.0 0.5 0.041 13.6 0.5 1.3 1 1 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF3810 PF12725.7 ORF28930 - 0.0098 15.3 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3810) Proton_antipo_M PF00361.20 ORF27386 - 6e-05 22.4 10.8 6.8e-05 22.2 10.8 1.0 1 0 0 1 1 1 1 Proton-conducting membrane transporter GLE1 PF07817.13 ORF27219 - 0.0026 17.0 3.2 0.0028 16.9 3.2 1.1 1 0 0 1 1 1 1 GLE1-like protein DUF4512 PF14975.6 ORF27219 - 0.046 14.5 0.0 0.05 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4512) Fis1_TPR_C PF14853.6 ORF26517 - 1.4e-05 25.0 0.6 2.4e-05 24.3 0.6 1.2 1 0 0 1 1 1 1 Fis1 C-terminal tetratricopeptide repeat TPR_11 PF13414.6 ORF26517 - 0.0024 17.5 0.0 0.0036 17.0 0.0 1.3 1 0 0 1 1 1 1 TPR repeat PDGF_N PF04692.13 ORF26517 - 0.023 15.4 0.4 0.032 15.0 0.4 1.3 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region TPR_19 PF14559.6 ORF26517 - 0.03 14.8 0.0 0.048 14.2 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF26517 - 0.035 14.3 0.0 0.11 12.8 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF26517 - 0.057 14.3 0.2 0.1 13.5 0.2 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF26517 - 0.057 13.3 0.0 0.094 12.6 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF26517 - 0.078 13.1 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat COMP PF11598.8 ORF26517 - 0.13 12.8 0.7 0.25 11.9 0.7 1.5 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein HATPase_c PF02518.26 ORF24591 - 3.8e-06 27.4 0.0 6.3e-06 26.7 0.0 1.3 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CheR PF01739.18 ORF24493 - 0.006 16.1 0.1 0.0061 16.1 0.1 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain DUF3216 PF11505.8 ORF24493 - 0.03 14.5 0.0 0.034 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3216) CUE PF02845.16 ORF24493 - 0.081 12.6 1.3 0.81 9.5 0.2 2.3 2 0 0 2 2 2 0 CUE domain CRF1 PF10380.9 ORF24118 - 0.047 14.0 2.3 0.64 10.4 2.3 2.2 1 1 0 1 1 1 0 Transcription factor CRF1 DUF2378 PF09536.10 ORF2389 - 0.032 14.1 0.0 0.033 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2378) DUF1542 PF07564.11 ORF2378 - 0.074 13.2 0.2 0.1 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1542) VIT1 PF01988.19 ORF2378 - 1.7 8.4 3.7 9.1 6.1 0.1 2.0 1 1 1 2 2 2 0 VIT family TRM13 PF05206.14 ORF23762 - 0.89 9.0 3.0 0.97 8.9 3.0 1.1 1 0 0 1 1 1 0 Methyltransferase TRM13 Sde2_N_Ubi PF13019.6 ORF22867 - 0.015 15.1 0.1 0.017 15.0 0.1 1.3 1 1 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain FPP PF05911.11 ORF22463 - 0.0073 14.6 6.1 0.0082 14.4 6.1 1.0 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil ALIX_LYPXL_bnd PF13949.6 ORF22463 - 0.015 14.6 2.4 0.019 14.3 2.4 1.2 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV Serine_rich PF08824.10 ORF22463 - 0.024 14.6 0.4 0.027 14.5 0.4 1.0 1 0 0 1 1 1 0 Serine rich protein interaction domain DUF3450 PF11932.8 ORF22463 - 0.047 13.0 1.6 0.056 12.7 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Spc29 PF17082.5 ORF22463 - 0.052 13.4 2.1 0.056 13.3 2.1 1.1 1 0 0 1 1 1 0 Spindle Pole Component 29 DUF349 PF03993.12 ORF22463 - 0.11 12.9 1.2 0.11 12.9 1.2 2.1 1 1 1 2 2 2 0 Domain of Unknown Function (DUF349) TMPIT PF07851.13 ORF22463 - 0.11 11.8 3.5 0.12 11.7 3.5 1.0 1 0 0 1 1 1 0 TMPIT-like protein Laminin_II PF06009.12 ORF22463 - 0.11 12.5 2.0 0.13 12.3 2.0 1.1 1 0 0 1 1 1 0 Laminin Domain II FapA PF03961.13 ORF22463 - 0.12 11.0 8.1 0.14 10.8 8.1 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A APG6_N PF17675.1 ORF22463 - 0.14 12.7 7.4 0.19 12.3 7.4 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF22463 - 0.23 9.3 3.7 0.24 9.3 3.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Seryl_tRNA_N PF02403.22 ORF22463 - 0.3 11.3 8.0 0.38 11.0 8.0 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Spc24 PF08286.11 ORF22463 - 0.64 10.3 8.4 4 7.7 1.5 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DivIC PF04977.15 ORF22463 - 2.5 8.0 10.1 4.2 7.2 2.5 2.1 1 1 1 2 2 2 0 Septum formation initiator VGPC1_C PF16799.5 ORF22463 - 8.9 6.4 12.0 0.18 11.8 1.3 2.7 1 1 2 3 3 3 0 C-terminal membrane-localisation domain of ion-channel, VCN1 DUF2063 PF09836.9 ORF21728 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain COPI_assoc PF08507.10 ORF21507 - 4e-08 33.4 8.2 4.8e-08 33.1 8.2 1.0 1 0 0 1 1 1 1 COPI associated protein HATPase_c PF02518.26 ORF2071 - 3.8e-06 27.4 0.0 6.3e-06 26.7 0.0 1.3 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UPF0767 PF15990.5 ORF20690 - 1.4 9.2 4.7 1.1 9.5 1.0 2.0 1 1 1 2 2 2 0 UPF0767 family MFS_1 PF07690.16 ORF19712 - 0.048 12.6 8.4 0.05 12.5 8.4 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily TamB PF04357.13 ORF19488 - 1.3e-13 50.9 0.3 1.5e-13 50.8 0.3 1.0 1 0 0 1 1 1 1 TamB, inner membrane protein subunit of TAM complex MORN PF02493.20 ORF18362 - 6.8e-23 79.1 19.5 9.3e-08 31.5 3.1 4.8 5 0 0 5 5 5 4 MORN repeat Qn_am_d_aII PF14930.6 ORF18362 - 0.036 14.4 2.8 0.044 14.1 2.8 1.2 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain II DUF4113 PF13438.6 ORF18362 - 0.15 12.2 1.3 0.19 11.8 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4113) DUF3048_C PF17479.2 ORF18362 - 0.3 11.5 4.1 2.7 8.4 1.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain DUF2063 PF09836.9 ORF17843 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain Ferrochelatase PF00762.19 ORF17361 - 8.5e-35 120.3 0.0 9.9e-35 120.1 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase zf-CCCH PF00642.24 ORF17310 - 0.0012 18.7 0.9 0.0021 17.9 0.9 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) SprT-like PF10263.9 ORF16936 - 0.064 13.1 0.3 0.064 13.1 0.3 1.6 1 1 0 2 2 2 0 SprT-like family Acid_phosphat_B PF03767.14 ORF16923 - 0.017 14.7 0.1 0.023 14.3 0.1 1.2 1 0 0 1 1 1 0 HAD superfamily, subfamily IIIB (Acid phosphatase) DUF1876 PF08962.11 ORF15980 - 0.029 14.3 0.2 1.8 8.6 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1876) Cyclase PF04199.13 ORF15721 - 0.091 13.0 0.0 0.095 12.9 0.0 1.1 1 0 0 1 1 1 0 Putative cyclase zf-primase PF09329.11 ORF15059 - 0.11 12.3 0.1 0.26 11.1 0.1 1.6 1 0 0 1 1 1 0 Primase zinc finger DUF1713 PF08213.11 ORF15043 - 0.0089 15.9 20.8 0.0089 15.9 20.8 1.7 2 0 0 2 2 2 1 Mitochondrial domain of unknown function (DUF1713) PIN_6 PF17146.4 ORF15043 - 0.091 13.3 0.1 0.2 12.2 0.0 1.6 1 1 1 2 2 2 0 PIN domain of ribonuclease DUF2433 PF10360.9 ORF14999 - 0.049 13.7 0.1 0.067 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) DUF2063 PF09836.9 ORF14654 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain RGS12_us1 PF16613.5 ORF13911 - 0.051 13.9 4.3 0.069 13.5 4.3 1.2 1 0 0 1 1 1 0 Unstructured region of RGS12 PhoR PF11808.8 ORF13753 - 0.089 13.2 5.4 0.15 12.5 0.4 2.1 2 0 0 2 2 2 0 Phosphate regulon sensor protein PhoR PsbL PF02419.17 ORF13420 - 1.3e-18 66.7 0.9 1.9e-18 66.2 0.9 1.2 1 0 0 1 1 1 1 PsbL protein LupA PF18242.1 ORF13132 - 0.009 15.7 0.0 0.0098 15.6 0.0 1.1 1 0 0 1 1 1 1 Legionella ubiquitin-specific protease A domain HTH_17 PF12728.7 ORF13132 - 0.16 12.2 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain TFIID_NTD2 PF04494.15 ORF13063 - 0.018 15.3 0.0 0.026 14.7 0.0 1.3 1 0 0 1 1 1 0 WD40 associated region in TFIID subunit, NTD2 domain Pex14_N PF04695.13 ORF1267 - 0.066 13.9 1.9 0.08 13.6 1.9 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Citrate_synt PF00285.21 ORF12325 - 0.95 8.5 2.7 1 8.4 2.7 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain eIF3_p135 PF12807.7 ORF12091 - 0.086 12.9 2.5 0.092 12.8 2.5 1.1 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit 135 VPDSG-CTERM PF18205.1 ORF11770 - 0.69 9.8 6.8 3.7 7.5 3.1 2.5 2 0 0 2 2 2 0 VPDSG-CTERM motif Amino_oxidase PF01593.24 ORF112492 - 0.00019 20.9 0.2 0.00019 20.9 0.2 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DUF2063 PF09836.9 ORF112419 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain DUF5038 PF16441.5 ORF112314 - 0.1 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5038) DUF126 PF01989.16 ORF112139 - 0.0059 16.4 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain MRFAP1 PF15155.6 ORF111967 - 0.066 13.7 0.1 0.077 13.5 0.1 1.1 1 0 0 1 1 1 0 MORF4 family-associated protein1 DUF2335 PF10097.9 ORF111511 - 0.83 9.7 6.2 1.5 8.9 6.2 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2335) SIT PF15330.6 ORF111351 - 0.13 12.8 0.1 0.16 12.4 0.1 1.1 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT Ank_3 PF13606.6 ORF111074 - 3e-06 27.1 0.0 7.8e-06 25.9 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 ORF111074 - 2.3e-05 24.9 0.0 3.8e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF111074 - 2.4e-05 24.8 0.0 2.6e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF111074 - 0.00064 20.0 0.0 0.00092 19.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF111074 - 0.0035 17.7 0.0 0.008 16.6 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeat 3Beta_HSD PF01073.19 ORF111068 - 0.0037 16.3 0.0 0.0038 16.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family DapB_N PF01113.20 ORF111068 - 0.029 14.5 0.1 0.045 13.9 0.1 1.3 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus RmlD_sub_bind PF04321.17 ORF111068 - 0.094 11.8 0.0 0.094 11.8 0.0 1.1 1 0 0 1 1 1 0 RmlD substrate binding domain SesA PF17107.5 ORF110895 - 0.001 19.2 1.4 0.0012 19.0 1.4 1.1 1 0 0 1 1 1 1 N-terminal domain on NACHT_NTPase and P-loop NTPases Arena_ncap_C PF17290.2 ORF110895 - 0.02 14.3 0.4 0.022 14.1 0.4 1.1 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain TALPID3 PF15324.6 ORF109772 - 0.029 12.1 3.2 0.032 11.9 3.2 1.0 1 0 0 1 1 1 0 Hedgehog signalling target DUF4191 PF13829.6 ORF1089 - 0.29 10.4 2.6 0.35 10.2 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF3043 PF11241.8 ORF1089 - 0.79 9.7 1.8 1.1 9.3 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) NfI_DNAbd_pre-N PF10524.9 ORF108556 - 0.02 14.7 0.0 0.032 14.1 0.0 1.3 1 0 0 1 1 1 0 Nuclear factor I protein pre-N-terminus DUF126 PF01989.16 ORF108486 - 0.0059 16.4 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain DUF5344 PF17279.2 ORF10844 - 0.045 14.3 0.1 0.073 13.7 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5344) DUF1356 PF07092.12 ORF108076 - 0.52 9.5 3.2 0.37 10.0 2.1 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1356) Tachykinin PF02202.16 ORF10753 - 0.15 12.0 0.2 0.28 11.2 0.2 1.5 1 0 0 1 1 1 0 Tachykinin family DENN PF02141.21 ORF107207 - 0.081 12.9 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 DENN (AEX-3) domain zf-LITAF-like PF10601.9 ORF106987 - 0.00074 19.7 2.1 0.00074 19.7 2.1 1.6 2 1 0 2 2 2 1 LITAF-like zinc ribbon domain LRR_6 PF13516.6 ORF106889 - 0.00018 21.3 0.1 0.0036 17.2 0.1 2.4 2 0 0 2 2 2 1 Leucine Rich repeat Ank_4 PF13637.6 ORF105779 - 4.2e-11 43.1 0.1 6.3e-11 42.6 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF105779 - 2.9e-07 30.6 1.6 0.0023 18.2 0.2 2.3 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF105779 - 3.1e-07 30.9 0.1 4.2e-07 30.4 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF105779 - 0.00069 19.9 0.4 0.025 15.0 0.1 2.5 3 0 0 3 3 3 1 Ankyrin repeat Ank_3 PF13606.6 ORF105779 - 0.11 13.1 0.2 1.1 10.0 0.1 2.4 3 0 0 3 3 3 0 Ankyrin repeat Pox_A_type_inc PF04508.12 ORF105767 - 0.62 10.0 3.0 1.8 8.6 0.3 2.4 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat Xol-1_N PF09108.10 ORF105590 - 0.18 11.6 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Switch protein XOL-1, N-terminal PsbK PF02533.15 ORF105290 - 2.4e-20 72.4 6.5 2.4e-20 72.4 6.5 1.6 2 0 0 2 2 2 1 Photosystem II 4 kDa reaction centre component DUF2063 PF09836.9 ORF105191 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain DUF2063 PF09836.9 ORF105075 - 0.065 13.5 1.2 0.094 13.0 1.2 1.4 1 1 0 1 1 1 0 Putative DNA-binding domain Tachykinin PF02202.16 ORF104905 - 0.15 12.0 0.2 0.28 11.2 0.2 1.5 1 0 0 1 1 1 0 Tachykinin family DUF1700 PF08006.11 ORF104282 - 0.0089 15.6 1.0 0.01 15.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) HECT PF00632.25 ORF103816 - 4.5e-15 55.9 1.3 4.8e-15 55.8 1.3 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) MCU PF04678.13 ORF103520 - 7.5e-16 58.7 3.1 8.4e-16 58.6 3.1 1.0 1 0 0 1 1 1 1 Mitochondrial calcium uniporter Halogen_Hydrol PF10112.9 ORF103520 - 0.02 14.9 0.4 0.027 14.5 0.4 1.2 1 1 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PspB PF06667.12 ORF103520 - 0.028 14.5 0.3 0.044 13.8 0.3 1.3 1 0 0 1 1 1 0 Phage shock protein B DUF4298 PF14131.6 ORF102913 - 0.0019 18.1 0.8 0.0033 17.4 0.5 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4298) DUF2854 PF11016.8 ORF102713 - 0.055 13.4 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) Carboxyl_trans PF01039.22 ORF102578 - 1.7e-23 83.0 0.0 2.2e-23 82.7 0.0 1.1 1 0 0 1 1 1 1 Carboxyl transferase domain DUF4466 PF14725.6 ORF102578 - 0.018 14.6 0.0 0.019 14.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4466) KRBA1 PF15287.6 ORF102563 - 0.59 9.9 6.9 0.65 9.7 0.0 2.8 2 1 0 2 2 2 0 KRBA1 family repeat EF-hand_7 PF13499.6 ORF102521 - 8.2e-05 23.0 0.2 0.00011 22.6 0.2 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF102521 - 0.0003 20.6 0.4 0.0004 20.2 0.4 1.3 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF102521 - 0.0035 16.8 0.6 0.0063 16.0 0.2 1.7 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF102521 - 0.011 15.6 0.2 0.057 13.4 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain HTH_Tnp_ISL3 PF13542.6 ORF102450 - 0.22 11.0 0.2 0.52 9.8 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Arm_3 PF16186.5 ORF102378 - 8.7e-16 57.2 0.1 1.2e-15 56.8 0.1 1.2 1 0 0 1 1 1 1 Atypical Arm repeat DUF5588 PF17826.1 ORF101805 - 0.1 11.5 0.6 0.1 11.4 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5588) LBR_tudor PF09465.10 ORF101777 - 0.0041 16.9 0.1 0.0066 16.2 0.1 1.3 1 0 0 1 1 1 1 Lamin-B receptor of TUDOR domain DUF1325 PF07039.11 ORF101777 - 0.034 14.2 0.0 0.042 13.9 0.0 1.2 1 0 0 1 1 1 0 SGF29 tudor-like domain Importin_rep_6 PF18829.1 ORF101357 - 0.011 15.9 0.3 0.013 15.6 0.3 1.2 1 0 0 1 1 1 0 Importin repeat 6 COX6C PF02937.15 ORF101357 - 0.11 12.7 0.3 0.17 12.0 0.3 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc DUF5336 PF17270.2 ORF100769 - 0.092 12.4 2.2 0.86 9.2 2.2 2.0 1 1 0 1 1 1 0 Family of unknown function (DUF5336) DUF4695 PF15766.5 ORF100570 - 0.081 13.2 0.5 0.096 12.9 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4695) Diphtheria_C PF02763.14 ORF10043 - 0.16 11.6 0.8 11 5.6 0.1 2.0 1 1 1 2 2 2 0 Diphtheria toxin, C domain Pam17 PF08566.10 ORF10019 - 3.1 7.6 5.1 3.6 7.4 5.1 1.1 1 0 0 1 1 1 0 Mitochondrial import protein Pam17 Lamprin PF06403.11 NODE_58585_length_286_cov_1.163347_g50646_i0forward_frame_1 - 0.014 15.3 2.5 0.02 14.8 2.5 1.3 1 0 0 1 1 1 0 Lamprin GAIN_A PF18619.1 NODE_58582_length_286_cov_1.239044_g50643_i0forward_frame_1 - 8.5 6.7 6.8 1.4 9.2 0.7 2.3 2 1 0 2 2 2 0 GPCR-Autoproteolysis-INducing (GAIN) subdomain A DUF1685 PF07939.11 NODE_58577_length_286_cov_1.334661_g50638_i0reverse_frame_1 - 0.031 14.0 0.4 0.61 9.9 0.4 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1685) HCV_NS1 PF01560.17 NODE_58568_length_286_cov_1.494024_g50629_i0reverse_frame_1 - 0.0071 15.1 0.1 0.0077 14.9 0.1 1.1 1 0 0 1 1 1 1 Hepatitis C virus non-structural protein E2/NS1 RepA1_leader PF08048.12 NODE_58566_length_286_cov_1.565737_g50627_i0reverse_frame_1 - 0.76 10.1 5.3 0.68 10.3 2.7 2.0 2 0 0 2 2 2 0 Tap RepA1 leader peptide Pkinase PF00069.25 NODE_58564_length_286_cov_1.589641_g50625_i0forward_frame_1 - 0.017 14.5 0.1 0.019 14.3 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58564_length_286_cov_1.589641_g50625_i0forward_frame_1 - 0.092 12.0 0.0 0.099 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase zf_C2H2_6 PF18450.1 NODE_58553_length_286_cov_1.956175_g50614_i0reverse_frame_1 - 0.91 9.3 5.2 0.31 10.8 1.9 2.0 2 0 0 2 2 2 0 Zinc Finger domain Caveolin PF01146.17 NODE_58552_length_286_cov_1.964143_g50613_i0forward_frame_1 - 0.075 13.0 2.1 0.094 12.7 2.1 1.1 1 0 0 1 1 1 0 Caveolin Lamprin PF06403.11 NODE_58547_length_286_cov_2.047809_g50608_i0forward_frame_1 - 0.056 13.4 3.3 0.063 13.2 3.3 1.1 1 0 0 1 1 1 0 Lamprin Pkinase PF00069.25 NODE_58543_length_286_cov_2.147410_g50604_i0forward_frame_1 - 5.2e-23 81.8 0.0 5.6e-23 81.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58543_length_286_cov_2.147410_g50604_i0forward_frame_1 - 6.2e-12 45.4 0.0 6.6e-12 45.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_58543_length_286_cov_2.147410_g50604_i0forward_frame_1 - 0.0027 17.1 0.0 0.0031 16.9 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pox_ser-thr_kin PF05445.11 NODE_58543_length_286_cov_2.147410_g50604_i0forward_frame_1 - 0.11 11.5 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase GTP_EFTU PF00009.27 NODE_58542_length_286_cov_2.167331_g50603_i0reverse_frame_1 - 7.2e-09 35.5 0.1 8.1e-09 35.3 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Met_asp_mut_E PF06368.11 NODE_58542_length_286_cov_2.167331_g50603_i0reverse_frame_1 - 0.042 12.3 0.0 0.048 12.1 0.0 1.0 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) SAGA-Tad1 PF12767.7 NODE_58539_length_286_cov_2.215139_g50600_i0reverse_frame_1 - 0.012 15.3 1.1 0.013 15.2 1.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit Flavi_glycoprot PF00869.20 NODE_58539_length_286_cov_2.215139_g50600_i0reverse_frame_1 - 0.17 11.1 0.1 0.2 10.8 0.1 1.1 1 0 0 1 1 1 0 Flavivirus glycoprotein, central and dimerisation domains AAA_23 PF13476.6 NODE_58539_length_286_cov_2.215139_g50600_i0reverse_frame_1 - 4.2 7.8 8.6 4.8 7.6 8.6 1.0 1 0 0 1 1 1 0 AAA domain DUF3446 PF11928.8 NODE_58535_length_286_cov_2.342629_g50596_i0reverse_frame_1 - 1.6 9.1 8.0 4.3 7.7 8.0 1.8 1 1 0 1 1 1 0 Early growth response N-terminal domain Med3 PF11593.8 NODE_58535_length_286_cov_2.342629_g50596_i0reverse_frame_1 - 9.3 5.3 13.6 9.4 5.3 13.6 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal PhoR PF11808.8 NODE_58533_length_286_cov_2.390438_g50594_i0forward_frame_1 - 0.1 13.0 0.0 0.72 10.3 0.0 2.0 2 0 0 2 2 2 0 Phosphate regulon sensor protein PhoR BMFP PF04380.13 NODE_58530_length_286_cov_2.438247_g50591_i0forward_frame_1 - 2.5e-12 47.1 3.6 3.2e-12 46.7 3.6 1.2 1 0 0 1 1 1 1 Membrane fusogenic activity Sugarporin_N PF11471.8 NODE_58530_length_286_cov_2.438247_g50591_i0forward_frame_1 - 0.053 13.5 0.3 0.38 10.7 0.5 1.9 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension SlyX PF04102.12 NODE_58530_length_286_cov_2.438247_g50591_i0forward_frame_1 - 0.067 13.8 0.9 0.096 13.3 0.9 1.2 1 0 0 1 1 1 0 SlyX SUI1 PF01253.22 NODE_58525_length_286_cov_2.697211_g50586_i0reverse_frame_1 - 0.026 15.0 0.1 0.038 14.5 0.1 1.3 1 0 0 1 1 1 0 Translation initiation factor SUI1 Diphtheria_C PF02763.14 NODE_58524_length_286_cov_2.768924_g50585_i0reverse_frame_1 - 0.0024 17.6 0.0 0.0027 17.4 0.0 1.0 1 0 0 1 1 1 1 Diphtheria toxin, C domain Penicil_amidase PF01804.18 NODE_58515_length_286_cov_3.111554_g50576_i0forward_frame_1 - 0.00025 20.2 0.0 0.00026 20.1 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks246.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks246.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks246.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks246.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:00:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4972 PF16342.5 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.011 15.4 0.7 0.014 15.1 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) Orexin_rec2 PF03827.13 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.019 15.0 0.1 0.028 14.4 0.1 1.3 1 0 0 1 1 1 0 Orexin receptor type 2 Lectin_N PF03954.14 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.078 12.7 0.2 0.099 12.4 0.2 1.2 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF2179 PF10035.9 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.11 12.2 1.0 0.2 11.4 1.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) Tubulin PF00091.25 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.18 12.0 0.4 0.28 11.3 0.3 1.4 1 1 1 2 2 2 0 Tubulin/FtsZ family, GTPase domain zf-C2H2_11 PF16622.5 NODE_58485_length_286_cov_62.565737_g50546_i0reverse_frame_1 - 0.011 15.5 1.5 0.027 14.2 1.5 1.7 1 0 0 1 1 1 0 zinc-finger C2H2-type Rtf2 PF04641.12 NODE_58483_length_286_cov_64.266932_g50544_i0reverse_frame_1 - 3.3e-05 23.4 0.3 3.4e-05 23.3 0.3 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger MORN PF02493.20 NODE_58481_length_286_cov_69.733068_g50542_i0reverse_frame_1 - 0.0087 15.9 0.2 0.021 14.7 0.1 1.7 2 0 0 2 2 2 1 MORN repeat CENP-I PF07778.11 NODE_58469_length_286_cov_112.788845_g50530_i0reverse_frame_1 - 0.66 8.6 4.8 0.74 8.5 4.8 1.0 1 0 0 1 1 1 0 Mis6 Podoplanin PF05808.11 NODE_58469_length_286_cov_112.788845_g50530_i0forward_frame_1 - 0.078 13.1 0.1 0.084 13.0 0.1 1.1 1 0 0 1 1 1 0 Podoplanin cpYpsA PF12694.7 NODE_58465_length_286_cov_129.286853_g50526_i0reverse_frame_1 - 0.13 12.1 0.0 0.27 11.0 0.0 1.6 1 1 1 2 2 2 0 Circularly permutated YpsA SLOG family DUF1422 PF07226.11 NODE_58463_length_286_cov_223.055777_g50524_i0reverse_frame_1 - 0.026 14.5 0.1 0.033 14.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) DUF485 PF04341.12 NODE_58463_length_286_cov_223.055777_g50524_i0reverse_frame_1 - 0.054 13.4 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 Vpu PF00558.19 NODE_58463_length_286_cov_223.055777_g50524_i0reverse_frame_1 - 1.9 8.3 5.0 0.16 11.7 0.6 1.5 2 0 0 2 2 2 0 Vpu protein DUF3724 PF12521.8 NODE_58461_length_286_cov_257.430279_g50522_i0reverse_frame_1 - 0.15 12.0 2.1 0.25 11.3 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3724) Treslin_N PF15292.6 NODE_58456_length_286_cov_390.697211_g50517_i0forward_frame_1 - 0.035 12.5 0.4 0.043 12.2 0.4 1.0 1 0 0 1 1 1 0 Treslin N-terminus DUF1249 PF06853.12 NODE_58453_length_286_cov_1214.832669_g50514_i0reverse_frame_1 - 0.059 13.4 0.1 0.075 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1249) Na_H_antiporter PF03553.14 NODE_58453_length_286_cov_1214.832669_g50514_i0forward_frame_1 - 0.011 15.0 0.2 0.011 15.0 0.2 1.1 1 0 0 1 1 1 0 Na+/H+ antiporter family Prolactin_RP PF15172.6 NODE_58448_length_287_cov_1.138889_g50509_i0reverse_frame_1 - 1.5 8.5 4.7 2.5 7.8 4.7 1.3 1 0 0 1 1 1 0 Prolactin-releasing peptide DUF2251 PF10008.9 NODE_58445_length_287_cov_1.246032_g50506_i0reverse_frame_1 - 0.02 15.0 2.2 0.027 14.5 2.2 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2251) DUF2851 PF11013.8 NODE_58443_length_287_cov_1.265873_g50504_i0reverse_frame_1 - 0.05 12.6 0.3 0.06 12.3 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2851) Statherin PF03875.13 NODE_58441_length_287_cov_1.269841_g50502_i0reverse_frame_1 - 1.1 9.4 6.5 2 8.6 6.5 1.4 1 0 0 1 1 1 0 Statherin Herpes_pp85 PF04637.12 NODE_58439_length_287_cov_1.289683_g50500_i0forward_frame_1 - 0.029 12.8 0.2 0.032 12.7 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF559 PF04480.12 NODE_58436_length_287_cov_1.408730_g50497_i0forward_frame_1 - 0.043 13.7 0.0 0.055 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF559) Glyco_hydro_11 PF00457.17 NODE_58433_length_287_cov_1.460317_g50494_i0reverse_frame_1 - 0.043 13.4 0.1 0.049 13.3 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 11 FAD_binding_3 PF01494.19 NODE_58428_length_287_cov_1.579365_g50489_i0forward_frame_1 - 0.015 14.6 0.0 0.016 14.4 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain DUF438 PF04282.13 NODE_58426_length_287_cov_1.638889_g50487_i0forward_frame_1 - 0.092 12.7 0.6 0.83 9.6 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF438) DUF3653 PF12375.8 NODE_58417_length_287_cov_1.853175_g50478_i0forward_frame_1 - 0.2 11.8 0.0 0.27 11.4 0.0 1.2 1 0 0 1 1 1 0 Phage protein SH3_4 PF06347.13 NODE_58408_length_287_cov_2.083333_g50469_i0forward_frame_1 - 0.088 12.6 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Bacterial SH3 domain DUF5542 PF17696.1 NODE_58407_length_287_cov_2.095238_g50468_i0forward_frame_1 - 0.16 12.1 0.9 0.23 11.6 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5542) PPV_E1_C PF00519.17 NODE_58402_length_287_cov_2.206349_g50463_i0reverse_frame_1 - 0.0062 15.4 0.1 0.0071 15.2 0.1 1.0 1 0 0 1 1 1 1 Papillomavirus helicase DUF3305 PF11749.8 NODE_58400_length_287_cov_2.226190_g50461_i0forward_frame_1 - 0.057 13.5 1.5 0.07 13.2 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3305) Lamprin PF06403.11 NODE_58398_length_287_cov_2.285714_g50459_i0reverse_frame_1 - 0.0066 16.4 20.4 0.0075 16.2 13.0 2.8 1 1 1 2 2 2 1 Lamprin Chorion_1 PF01723.16 NODE_58398_length_287_cov_2.285714_g50459_i0reverse_frame_1 - 4.8 7.1 7.9 12 5.9 6.9 2.1 1 1 0 1 1 1 0 Chorion protein zinc_ribbon_16 PF17034.5 NODE_58397_length_287_cov_2.297619_g50458_i0forward_frame_1 - 0.035 14.3 0.3 0.041 14.1 0.3 1.1 1 0 0 1 1 1 0 Zinc-ribbon like family DUF1516 PF07457.11 NODE_58393_length_287_cov_2.388889_g50454_i0reverse_frame_1 - 0.29 11.4 8.4 0.076 13.2 2.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1516) Macoilin PF09726.9 NODE_58392_length_287_cov_2.400794_g50453_i0reverse_frame_1 - 0.045 12.3 0.0 0.045 12.3 0.0 1.1 1 0 0 1 1 1 0 Macoilin family CGGC PF08821.11 NODE_58388_length_287_cov_2.515873_g50449_i0reverse_frame_1 - 0.017 15.3 0.1 0.027 14.6 0.1 1.3 1 0 0 1 1 1 0 CGGC domain Herpes_UL95 PF03038.14 NODE_58379_length_287_cov_2.757937_g50440_i0reverse_frame_1 - 0.02 14.0 0.1 0.024 13.8 0.1 1.0 1 0 0 1 1 1 0 UL95 family GCK PF07802.11 NODE_58377_length_287_cov_2.805556_g50438_i0forward_frame_1 - 0.13 12.7 0.2 0.27 11.7 0.0 1.5 2 0 0 2 2 2 0 GCK domain zf-C2HCIx2C PF10782.9 NODE_58364_length_287_cov_9.853175_g50425_i0forward_frame_1 - 0.038 13.9 0.1 0.079 12.9 0.1 1.5 1 0 0 1 1 1 0 Zinc-finger AMPKBI PF04739.15 NODE_58356_length_287_cov_39.436508_g50417_i0reverse_frame_1 - 0.068 13.4 1.1 0.1 12.9 1.0 1.3 1 1 0 1 1 1 0 5'-AMP-activated protein kinase beta subunit, interaction domain DAG_kinase_N PF14513.6 NODE_58355_length_287_cov_41.337302_g50416_i0forward_frame_1 - 0.27 11.4 1.9 0.32 11.2 1.9 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus STAS_2 PF13466.6 NODE_58354_length_287_cov_44.861111_g50415_i0forward_frame_1 - 0.054 13.8 0.1 0.12 12.8 0.1 1.5 2 0 0 2 2 2 0 STAS domain PEGSRP PF07623.11 NODE_58348_length_287_cov_57.535714_g50409_i0forward_frame_1 - 0.016 15.0 0.2 0.036 13.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1584) DUF4577 PF15145.6 NODE_58341_length_287_cov_62.142857_g50402_i0reverse_frame_1 - 0.028 14.5 0.2 0.035 14.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) ODV-E18 PF10717.9 NODE_58341_length_287_cov_62.142857_g50402_i0reverse_frame_1 - 2.7 7.9 6.4 0.4 10.6 2.8 1.5 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Baculo_11_kDa PF06143.11 NODE_58341_length_287_cov_62.142857_g50402_i0reverse_frame_1 - 5 6.8 11.7 5.2 6.7 8.6 2.0 2 0 0 2 2 2 0 Baculovirus 11 kDa family Orf78 PF06024.12 NODE_58341_length_287_cov_62.142857_g50402_i0reverse_frame_1 - 9.8 6.5 9.0 1.6 9.0 4.9 1.8 1 1 1 2 2 2 0 Orf78 (ac78) DUF4116 PF13475.6 NODE_58333_length_287_cov_73.059524_g50394_i0forward_frame_1 - 2.9e-10 39.7 0.0 1.3e-09 37.6 0.0 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4116) Yos1 PF08571.10 NODE_58317_length_287_cov_104.234127_g50378_i0reverse_frame_1 - 0.059 13.6 0.0 0.081 13.2 0.0 1.2 1 0 0 1 1 1 0 Yos1-like Inp1 PF12634.7 NODE_58300_length_287_cov_187.924603_g50361_i0reverse_frame_1 - 0.035 14.1 0.0 0.04 13.9 0.0 1.1 1 0 0 1 1 1 0 Inheritance of peroxisomes protein 1 TRAP_beta PF05753.14 NODE_58299_length_287_cov_194.293651_g50360_i0forward_frame_1 - 0.11 11.8 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) Neur_chan_memb PF02932.16 NODE_58284_length_288_cov_1.114625_g50345_i0forward_frame_1 - 0.079 13.0 0.9 0.09 12.8 0.9 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3783 PF12646.7 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.017 15.0 0.8 0.31 11.0 0.3 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF3783) USP7_ICP0_bdg PF12436.8 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.024 14.0 2.9 0.029 13.7 1.4 1.6 1 1 1 2 2 2 0 ICP0-binding domain of Ubiquitin-specific protease 7 FapA PF03961.13 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.083 11.5 9.0 0.1 11.2 9.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF5497 PF17601.2 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.16 12.3 5.4 0.11 12.9 2.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5497) Prominin PF05478.11 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.22 9.4 4.9 0.26 9.2 4.9 1.0 1 0 0 1 1 1 0 Prominin AAA_7 PF12775.7 NODE_58273_length_288_cov_1.371542_g50334_i0reverse_frame_1 - 8.8e-24 84.0 0.0 1e-23 83.8 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF1505 PF07403.11 NODE_58273_length_288_cov_1.371542_g50334_i0forward_frame_1 - 0.02 15.1 2.3 0.023 14.9 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) DUF1170 PF06663.13 NODE_58270_length_288_cov_1.446640_g50331_i0reverse_frame_1 - 0.028 14.1 0.1 0.046 13.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1170) DUF4119 PF13494.6 NODE_58270_length_288_cov_1.446640_g50331_i0reverse_frame_1 - 0.076 13.2 0.1 0.09 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF4119) Kelch_5 PF13854.6 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 1.6e-16 59.9 0.0 1e-09 38.2 0.0 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 1.3e-12 47.7 0.0 2.4e-08 34.1 0.0 2.8 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 1.3e-12 47.5 0.7 3.8e-08 33.2 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 5.1e-11 42.1 0.6 2e-09 37.1 0.1 2.2 2 0 0 2 2 2 1 Kelch motif Kelch_1 PF01344.25 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 1.1e-07 31.3 0.3 6.3e-06 25.7 0.0 2.1 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 9.9e-07 28.8 0.6 2.3e-06 27.7 0.1 1.8 1 1 1 2 2 2 1 Kelch motif Cullin PF00888.22 NODE_58265_length_288_cov_1.557312_g50326_i0reverse_frame_1 - 6.4e-21 74.6 0.2 6.8e-21 74.5 0.2 1.0 1 0 0 1 1 1 1 Cullin family SelP_C PF04593.14 NODE_58261_length_288_cov_1.675889_g50322_i0forward_frame_1 - 0.22 11.5 0.0 0.29 11.1 0.0 1.2 1 0 0 1 1 1 0 Selenoprotein P, C terminal region Nsp3_PL2pro PF12124.8 NODE_58259_length_288_cov_1.683794_g50320_i0forward_frame_1 - 0.57 10.0 2.5 4.2 7.2 1.0 2.2 1 1 1 2 2 2 0 Coronavirus polyprotein cleavage domain PRA1 PF03208.19 NODE_58257_length_288_cov_1.703557_g50318_i0forward_frame_1 - 0.83 9.3 7.5 1 9.0 7.5 1.2 1 1 0 1 1 1 0 PRA1 family protein Fiji_64_capsid PF05880.11 NODE_58254_length_288_cov_1.739130_g50315_i0reverse_frame_1 - 0.025 13.2 0.1 0.026 13.1 0.1 1.0 1 0 0 1 1 1 0 Fijivirus 64 kDa capsid protein Cu_bind_like PF02298.17 NODE_58254_length_288_cov_1.739130_g50315_i0reverse_frame_1 - 0.11 12.6 0.3 0.62 10.1 0.2 1.9 1 1 1 2 2 2 0 Plastocyanin-like domain zf-CCHC_4 PF14392.6 NODE_58249_length_288_cov_1.853755_g50310_i0forward_frame_1 - 0.006 16.3 3.6 0.01 15.6 3.6 1.4 1 0 0 1 1 1 1 Zinc knuckle WD40 PF00400.32 NODE_58248_length_288_cov_1.885375_g50309_i0forward_frame_1 - 0.0022 18.8 0.3 5.4 8.1 0.0 3.1 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_58248_length_288_cov_1.885375_g50309_i0forward_frame_1 - 0.016 15.5 0.1 0.019 15.2 0.1 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain CUTL PF16557.5 NODE_58247_length_288_cov_1.901186_g50308_i0forward_frame_1 - 0.033 14.4 1.6 0.046 13.9 1.6 1.3 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB DUF5549 PF17703.1 NODE_58244_length_288_cov_1.968379_g50305_i0reverse_frame_1 - 0.038 13.6 0.9 0.041 13.5 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) Ntox34 PF15606.6 NODE_58244_length_288_cov_1.968379_g50305_i0reverse_frame_1 - 0.16 12.1 2.2 0.27 11.4 2.2 1.4 1 0 0 1 1 1 0 Bacterial toxin 34 Topoisom_bac PF01131.20 NODE_58243_length_288_cov_1.968379_g50304_i0reverse_frame_1 - 1.3e-12 47.5 0.1 1.4e-12 47.4 0.1 1.0 1 0 0 1 1 1 1 DNA topoisomerase TssN PF17555.2 NODE_58240_length_288_cov_2.015810_g50301_i0reverse_frame_1 - 0.028 13.8 0.3 0.029 13.8 0.3 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF2417 PF10329.9 NODE_58224_length_288_cov_2.328063_g50285_i0reverse_frame_1 - 1.3 8.3 16.6 1.5 8.2 16.6 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) PRP1_N PF06424.12 NODE_58224_length_288_cov_2.328063_g50285_i0forward_frame_1 - 0.061 13.7 6.0 0.071 13.5 6.0 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal ATHILA PF03078.15 NODE_58224_length_288_cov_2.328063_g50285_i0forward_frame_1 - 0.31 9.8 4.4 0.35 9.6 4.4 1.0 1 0 0 1 1 1 0 ATHILA ORF-1 family RALF PF05498.11 NODE_58208_length_288_cov_3.446640_g50269_i0forward_frame_1 - 0.063 14.3 4.3 0.12 13.3 4.2 1.6 1 1 0 1 1 1 0 Rapid ALkalinization Factor (RALF) PNTB_4TM PF12769.7 NODE_58205_length_288_cov_4.090909_g50266_i0forward_frame_1 - 1.8e-29 102.0 9.0 2.3e-29 101.7 9.0 1.2 1 0 0 1 1 1 1 4TM region of pyridine nucleotide transhydrogenase, mitoch DUF3392 PF11872.8 NODE_58205_length_288_cov_4.090909_g50266_i0forward_frame_1 - 0.0014 18.9 2.0 0.0025 18.0 2.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3392) DNApol3-delta_C PF09115.10 NODE_58203_length_288_cov_4.209486_g50264_i0reverse_frame_1 - 5e-25 88.3 0.1 5.5e-25 88.2 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase III, delta subunit, C terminal Adap_comp_sub PF00928.21 NODE_58189_length_288_cov_54.778656_g50250_i0reverse_frame_1 - 1.9 7.8 4.6 2 7.7 4.6 1.0 1 0 0 1 1 1 0 Adaptor complexes medium subunit family TMF_TATA_bd PF12325.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 7e-05 23.0 13.2 0.00012 22.3 12.8 1.6 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding FlxA PF14282.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.00049 20.0 13.3 0.019 14.9 3.5 2.0 1 1 1 2 2 2 2 FlxA-like protein GAS PF13851.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.00081 18.8 17.5 0.001 18.5 17.5 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding Takusan PF04822.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0024 17.7 14.6 0.016 15.1 0.6 3.3 1 1 2 3 3 3 1 Takusan APG6_N PF17675.1 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0031 18.0 10.7 0.0031 18.0 10.7 2.0 1 1 1 2 2 2 1 Apg6 coiled-coil region Seryl_tRNA_N PF02403.22 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0036 17.5 12.1 0.0036 17.5 12.1 1.4 1 1 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Filament PF00038.21 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0048 16.5 12.9 0.0063 16.1 12.9 1.2 1 0 0 1 1 1 1 Intermediate filament protein KASH_CCD PF14662.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0096 15.8 18.2 0.014 15.3 18.2 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH CENP-F_leu_zip PF10473.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.011 15.8 20.1 0.49 10.4 5.3 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CALCOCO1 PF07888.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.011 14.6 15.1 0.012 14.5 15.1 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like ZapB PF06005.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.014 15.9 17.6 0.17 12.3 1.7 2.5 2 1 0 2 2 2 0 Cell division protein ZapB DUF4472 PF14739.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.016 15.9 13.3 0.16 12.7 4.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) BLOC1_2 PF10046.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.019 15.3 5.6 0.075 13.3 5.5 1.9 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HSBP1 PF06825.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.028 14.3 1.2 0.34 10.8 0.2 2.2 2 0 0 2 2 2 0 Heat shock factor binding protein 1 NPV_P10 PF05531.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.031 14.7 5.6 1.7 9.1 0.6 2.1 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.038 14.6 12.4 1.6 9.4 12.4 2.0 1 1 0 1 1 1 0 Initiation control protein YabA DivIC PF04977.15 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.04 13.7 16.9 0.3 10.9 7.1 2.4 1 1 1 2 2 2 0 Septum formation initiator Laminin_I PF06008.14 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.042 13.6 12.7 0.037 13.7 4.9 2.0 1 1 1 2 2 2 0 Laminin Domain I Cnn_1N PF07989.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.061 13.5 18.7 0.7 10.1 6.8 2.5 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Fungal_TACC PF12709.7 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.064 13.7 14.4 1.9 9.0 0.3 3.2 1 1 2 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins LPP PF04728.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.068 13.6 5.5 2.9 8.3 0.8 2.9 2 1 1 3 3 3 0 Lipoprotein leucine-zipper Pox_A_type_inc PF04508.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.089 12.7 11.9 1.7 8.6 0.2 3.8 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat KfrA_N PF11740.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.093 13.4 6.1 0.13 13.0 2.7 2.0 2 0 0 2 2 2 0 Plasmid replication region DNA-binding N-term Jnk-SapK_ap_N PF09744.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.097 12.9 17.6 0.11 12.7 17.6 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Phage_GP20 PF06810.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.11 12.3 18.0 1 9.1 18.0 2.0 1 1 0 1 1 1 0 Phage minor structural protein GP20 Spc7 PF08317.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.11 11.3 17.8 0.19 10.6 17.8 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein KELK PF15796.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.11 12.9 19.5 1.3 9.6 5.3 2.2 2 0 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase MCC-bdg_PDZ PF10506.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.11 12.5 2.2 0.36 10.9 0.2 2.3 2 1 1 3 3 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF3450 PF11932.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.12 11.7 10.1 0.43 9.8 10.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Golgin_A5 PF09787.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.12 11.8 14.6 0.13 11.7 14.6 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF724 PF05266.14 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.13 12.1 14.8 0.18 11.6 14.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Swi5 PF07061.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.13 12.4 13.3 0.17 12.0 3.1 2.1 2 0 0 2 2 2 0 Swi5 DUF4140 PF13600.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.14 12.6 11.4 1.7e+02 2.8 11.4 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Snapin_Pallidin PF14712.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.15 12.5 7.5 0.29 11.6 4.9 2.3 1 1 1 2 2 2 0 Snapin/Pallidin BRE1 PF08647.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.15 12.1 20.9 0.033 14.2 9.4 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase Fib_alpha PF08702.10 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.16 12.1 7.6 0.64 10.2 7.6 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Fzo_mitofusin PF04799.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.16 11.5 5.1 0.31 10.6 4.7 1.7 1 1 0 1 1 1 0 fzo-like conserved region BCAS2 PF05700.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.21 11.3 9.6 0.11 12.2 7.8 1.4 1 1 0 1 1 1 0 Breast carcinoma amplified sequence 2 (BCAS2) DUF1664 PF07889.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.22 11.6 7.4 0.091 12.8 4.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Fez1 PF06818.15 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.23 11.9 15.4 0.35 11.3 15.4 1.3 1 0 0 1 1 1 0 Fez1 DUF4201 PF13870.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.24 11.1 18.0 0.11 12.2 5.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) AAA_13 PF13166.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.24 10.0 15.4 0.7 8.5 15.4 1.6 1 1 0 1 1 1 0 AAA domain Csm1_N PF18504.1 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.33 11.3 16.8 2.9 8.3 5.7 2.9 1 1 2 3 3 3 0 Csm1 N-terminal domain TPR_MLP1_2 PF07926.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.34 11.0 15.8 0.4 10.7 12.3 2.1 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DegS PF05384.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.47 9.9 17.6 0.31 10.5 3.8 2.2 1 1 1 2 2 2 0 Sensor protein DegS CENP-H PF05837.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.49 10.8 12.6 1.5 9.3 12.6 1.7 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DUF948 PF06103.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.53 10.6 7.2 3.7 7.9 1.2 2.4 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) HIP1_clath_bdg PF16515.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.59 10.8 16.9 32 5.2 2.8 2.5 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ADIP PF11559.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.68 10.0 17.0 0.42 10.7 6.2 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding SKA2 PF16740.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.72 9.7 10.0 0.49 10.2 2.0 2.1 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 Rho_Binding PF08912.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.72 10.7 19.3 2.1 9.2 4.5 3.0 1 1 2 3 3 3 0 Rho Binding FlaC_arch PF05377.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.73 10.3 12.1 2.5 8.6 1.9 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Hanta_nucleocap PF00846.18 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.77 8.1 6.4 0.9 7.9 6.4 1.1 1 0 0 1 1 1 0 Hantavirus nucleocapsid protein PRKG1_interact PF15898.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.78 10.7 15.2 1.3 9.9 12.7 2.1 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Sec34 PF04136.15 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.78 9.6 7.1 0.24 11.3 1.6 1.9 1 1 1 2 2 2 0 Sec34-like family Ax_dynein_light PF10211.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.81 9.6 19.9 0.38 10.7 7.1 2.1 1 1 1 2 2 2 0 Axonemal dynein light chain Cep57_CLD_2 PF14197.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.84 9.8 18.1 0.97 9.6 11.1 3.0 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 TMPIT PF07851.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.86 8.8 10.3 1.1 8.5 10.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF812 PF05667.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.2 8.0 18.2 3.7 6.3 18.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF812) DUF1003 PF06210.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.2 9.3 5.0 1.6 8.9 0.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1003) DUF4407 PF14362.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.2 8.4 9.7 1.7 7.9 9.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Spc24 PF08286.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.3 9.3 14.8 0.8 10.0 5.5 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Atg14 PF10186.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.4 8.0 13.6 5.7 5.9 13.6 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 5_nucleotid PF05761.14 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 2 7.2 9.4 2.4 7.0 9.4 1.0 1 0 0 1 1 1 0 5' nucleotidase family UPF0242 PF06785.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 2.2 8.4 16.6 2.6 8.1 16.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Glyco_tran_28_C PF04101.16 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 2.2 8.2 8.0 2.4 8.1 0.9 2.0 2 0 0 2 2 2 0 Glycosyltransferase family 28 C-terminal domain bZIP_1 PF00170.21 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 2.9 8.1 18.7 4.3 7.5 6.8 2.6 2 1 0 2 2 2 0 bZIP transcription factor End3 PF12761.7 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 3.9 7.6 16.5 1.6 8.8 3.9 2.1 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 DUF1635 PF07795.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 3.9 7.3 10.3 17 5.2 10.3 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1635) Cluap1 PF10234.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 4.8 6.5 19.7 0.31 10.4 7.0 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 Tho2 PF11262.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 5.5 6.1 16.7 0.19 10.9 5.6 2.0 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 JIP_LZII PF16471.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 7.2 6.9 17.9 2.6 8.3 7.4 2.5 1 1 2 3 3 3 0 JNK-interacting protein leucine zipper II V_ATPase_I PF01496.19 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 8.5 4.2 9.8 11 3.8 9.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BST2 PF16716.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 8.5 7.0 13.6 1.7e+02 2.9 0.2 2.9 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Dzip-like_N PF13815.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 8.6 6.4 12.7 1.7 8.6 4.1 2.1 2 0 0 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal DUF3873 PF12989.7 NODE_58187_length_288_cov_57.320158_g50248_i0forward_frame_1 - 0.073 13.4 2.0 0.08 13.3 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3873) SNF2_N PF00176.23 NODE_58181_length_288_cov_64.861660_g50242_i0reverse_frame_1 - 3e-16 59.1 0.1 3.1e-16 59.1 0.1 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 NODE_58181_length_288_cov_64.861660_g50242_i0reverse_frame_1 - 6.2e-05 23.1 0.0 6.7e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 NODE_58181_length_288_cov_64.861660_g50242_i0reverse_frame_1 - 7.7e-05 22.5 0.0 8.8e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 SWI2/SNF2 ATPase AAA_22 PF13401.6 NODE_58181_length_288_cov_64.861660_g50242_i0reverse_frame_1 - 0.072 13.4 0.0 0.083 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain aGPT-Pplase3 PF18746.1 NODE_58178_length_288_cov_71.533597_g50239_i0reverse_frame_1 - 0.0018 17.7 0.1 0.0021 17.4 0.1 1.1 1 0 0 1 1 1 1 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 CLZ PF16526.5 NODE_58178_length_288_cov_71.533597_g50239_i0reverse_frame_1 - 0.022 15.1 0.1 0.04 14.3 0.1 1.4 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4632 PF15451.6 NODE_58178_length_288_cov_71.533597_g50239_i0forward_frame_1 - 0.3 11.2 0.0 0.47 10.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4632) p450 PF00067.22 NODE_58164_length_288_cov_137.968379_g50225_i0reverse_frame_1 - 0.018 13.8 0.0 0.03 13.1 0.0 1.3 1 0 0 1 1 1 0 Cytochrome P450 Frag1 PF10277.9 NODE_58156_length_288_cov_377.798419_g50217_i0reverse_frame_1 - 0.0089 15.6 0.6 0.01 15.4 0.6 1.0 1 0 0 1 1 1 1 Frag1/DRAM/Sfk1 family RecR PF02132.15 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_1 - 0.046 13.3 5.0 0.046 13.3 5.0 2.4 2 0 0 2 2 2 0 RecR protein PolC_DP2 PF03833.13 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_1 - 5.5 4.7 12.5 5.4 4.8 12.5 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 7TM_GPCR_Srw PF10324.9 NODE_58154_length_288_cov_617.660079_g50215_i0forward_frame_1 - 0.078 12.2 1.0 0.093 12.0 1.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srw Cadherin_C_2 PF16492.5 NODE_58148_length_289_cov_0.940945_g50209_i0reverse_frame_2 - 0.00074 20.2 0.0 0.001 19.8 0.0 1.2 1 0 0 1 1 1 1 Cadherin cytoplasmic C-terminal Mit_proteolip PF08039.11 NODE_58143_length_289_cov_1.251969_g50204_i0forward_frame_2 - 0.089 13.3 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial proteolipid CCB1 PF12046.8 NODE_58141_length_289_cov_1.314961_g50202_i0reverse_frame_3 - 0.15 11.4 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B HTH_46 PF15977.5 NODE_58136_length_289_cov_1.417323_g50197_i0reverse_frame_2 - 0.058 13.4 0.0 0.092 12.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding Prenyltrans PF00432.21 NODE_58134_length_289_cov_1.460630_g50195_i0reverse_frame_2 - 0.054 13.2 0.2 8.6 6.2 0.0 2.2 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat RVT_1 PF00078.27 NODE_58134_length_289_cov_1.460630_g50195_i0forward_frame_3 - 0.033 13.7 0.0 0.033 13.7 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) FimA PF16970.5 NODE_58132_length_289_cov_1.507874_g50193_i0forward_frame_2 - 0.01 16.1 0.1 0.012 15.8 0.1 1.1 1 0 0 1 1 1 1 Type-1 fimbrial protein, A Herpes_ICP4_N PF03584.15 NODE_58132_length_289_cov_1.507874_g50193_i0forward_frame_2 - 0.014 15.2 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus ICP4-like protein N-terminal region DUF2985 PF11204.8 NODE_58131_length_289_cov_1.598425_g50192_i0reverse_frame_2 - 0.0059 16.7 0.1 0.0083 16.3 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2985) Nudix_N PF12535.8 NODE_58131_length_289_cov_1.598425_g50192_i0forward_frame_3 - 0.11 12.1 0.1 0.22 11.1 0.1 1.4 1 0 0 1 1 1 0 Hydrolase of X-linked nucleoside diphosphate N terminal ACP53EA PF06313.11 NODE_58130_length_289_cov_1.622047_g50191_i0forward_frame_3 - 0.024 14.8 2.0 0.083 13.1 0.6 2.0 1 1 1 2 2 2 0 Drosophila ACP53EA protein E1_4HB PF16191.5 NODE_58130_length_289_cov_1.622047_g50191_i0forward_frame_2 - 0.043 14.0 2.0 0.049 13.8 1.0 1.6 2 0 0 2 2 2 0 Ubiquitin-activating enzyme E1 four-helix bundle EBA-175_VI PF11556.8 NODE_58124_length_289_cov_1.732283_g50185_i0reverse_frame_3 - 0.074 13.4 4.9 0.1 12.9 4.9 1.5 1 1 0 1 1 1 0 Erythrocyte binding antigen 175 DUF4674 PF15719.5 NODE_58123_length_289_cov_1.795276_g50184_i0forward_frame_2 - 0.015 15.3 0.1 0.022 14.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4674) Mod_r PF07200.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.00028 21.0 9.8 0.00037 20.6 9.8 1.2 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein APG6_N PF17675.1 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.00083 19.9 10.9 0.001 19.6 10.9 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region DUF4164 PF13747.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0032 17.7 3.9 0.071 13.4 2.1 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4164) Matrilin_ccoil PF10393.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.006 16.4 2.6 0.12 12.2 0.0 2.7 2 1 0 2 2 2 1 Trimeric coiled-coil oligomerisation domain of matrilin UPF0242 PF06785.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0066 16.6 12.1 0.0075 16.4 12.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus PspA_IM30 PF04012.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0077 15.8 1.3 0.0077 15.8 1.3 1.7 1 1 0 1 1 1 1 PspA/IM30 family vATP-synt_E PF01991.18 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0083 15.6 4.2 0.01 15.2 4.2 1.1 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit FlaC_arch PF05377.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.009 16.4 10.9 0.013 15.9 1.5 2.3 1 1 1 2 2 2 1 Flagella accessory protein C (FlaC) Apolipoprotein PF01442.18 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0092 15.9 4.9 0.011 15.6 4.9 1.1 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DNA_repr_REX1B PF14966.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.01 16.5 6.6 0.2 12.3 6.6 2.4 1 1 0 1 1 1 0 DNA repair REX1-B Cep57_CLD_2 PF14197.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.01 15.9 9.2 0.069 13.2 3.1 2.1 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 TACC_C PF05010.14 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.011 15.5 7.5 0.014 15.2 7.5 1.1 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal KxDL PF10241.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.013 15.7 3.4 0.021 15.1 3.4 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein DUF1664 PF07889.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.014 15.5 5.8 0.019 15.0 5.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Transcrip_act PF04949.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.018 14.9 4.6 0.023 14.6 4.6 1.2 1 0 0 1 1 1 0 Transcriptional activator SHE3 PF17078.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.021 14.6 12.7 0.044 13.5 12.5 1.5 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 Spc7 PF08317.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.025 13.5 9.1 0.029 13.3 9.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4407 PF14362.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.025 13.9 2.7 0.031 13.6 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3584 PF12128.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.026 12.1 7.1 0.028 11.9 7.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC_tran_CTD PF16326.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.028 14.7 5.7 0.16 12.2 5.3 2.0 1 1 1 2 2 2 0 ABC transporter C-terminal domain Laminin_II PF06009.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.029 14.4 6.0 0.075 13.0 6.0 1.6 1 1 0 1 1 1 0 Laminin Domain II TPR_MLP1_2 PF07926.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.037 14.1 2.3 0.037 14.1 2.3 2.0 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Rootletin PF15035.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.037 14.0 8.2 0.044 13.8 8.2 1.1 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion TMPIT PF07851.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.038 13.2 6.8 0.042 13.1 6.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein YlqD PF11068.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.04 14.3 6.3 0.049 14.0 6.3 1.1 1 0 0 1 1 1 0 YlqD protein CENP-F_leu_zip PF10473.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.041 13.9 11.3 0.064 13.3 11.3 1.3 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Effector_1 PF04518.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.042 12.9 4.7 0.042 12.9 4.7 1.0 1 0 0 1 1 1 0 Effector from type III secretion system COG6 PF06419.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.045 12.0 6.6 0.05 11.8 6.6 1.1 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 TMCO5 PF14992.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.048 13.2 8.4 0.057 13.0 8.4 1.0 1 0 0 1 1 1 0 TMCO5 family V_ATPase_I PF01496.19 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.051 11.5 7.1 0.055 11.4 7.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Exonuc_VII_L PF02601.15 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.052 13.1 4.4 0.06 12.9 4.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit YscO-like PF16789.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.059 13.4 6.2 0.09 12.8 6.1 1.4 1 1 0 1 1 1 0 YscO-like protein Sec34 PF04136.15 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.059 13.3 8.3 0.26 11.1 1.0 2.0 1 1 1 2 2 2 0 Sec34-like family WXG100 PF06013.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.073 13.3 1.3 1.4 9.2 1.3 2.3 1 1 0 1 1 1 0 Proteins of 100 residues with WXG HIP1_clath_bdg PF16515.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.088 13.4 7.6 0.85 10.3 7.3 2.0 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ADIP PF11559.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.093 12.8 10.4 0.15 12.2 10.4 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding BLOC1_2 PF10046.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.093 13.0 7.7 0.17 12.2 7.6 1.5 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Mt_ATP_synt PF15704.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.097 12.6 4.8 0.65 9.9 4.6 1.9 1 1 0 1 1 1 0 Mitochondrial ATP synthase subunit DUF3810 PF12725.7 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.1 11.9 2.5 0.12 11.7 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF2730 PF10805.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.1 12.7 2.7 0.16 12.1 2.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) DUF745 PF05335.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.11 12.3 2.6 0.17 11.6 2.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF745) ISG65-75 PF11727.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.11 11.7 5.0 0.12 11.6 5.0 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein HMMR_N PF15905.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.13 11.7 11.8 0.17 11.3 11.8 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF489 PF04356.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.13 12.2 1.9 0.17 11.9 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) DIT1_PvcA PF05141.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.15 11.5 3.1 0.17 11.3 3.1 1.1 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein DUF4140 PF13600.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.15 12.5 4.3 8.6 6.9 0.1 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Lebercilin PF15619.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 11.6 11.5 3.2 7.4 0.9 1.9 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease TMF_DNA_bd PF12329.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 12.0 16.4 0.86 9.6 14.4 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF3847 PF12958.7 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 12.1 0.3 0.16 12.1 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3847) CENP-H PF05837.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 12.4 6.1 0.23 11.9 6.1 1.3 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Occludin_ELL PF07303.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 12.7 6.6 0.19 12.5 4.9 1.8 1 1 1 2 2 2 0 Occludin homology domain DUF1690 PF07956.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.18 12.3 8.1 0.19 12.1 8.1 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF3450 PF11932.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.2 10.9 8.8 0.63 9.3 8.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FapA PF03961.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.21 10.2 9.0 0.25 9.9 9.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Nup88 PF10168.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.25 9.1 8.7 0.29 8.9 8.7 1.0 1 0 0 1 1 1 0 Nuclear pore component 5_nucleotid PF05761.14 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.25 10.2 4.7 0.27 10.1 4.7 1.0 1 0 0 1 1 1 0 5' nucleotidase family OmpH PF03938.14 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.27 11.6 7.4 0.72 10.2 7.4 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Prominin PF05478.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.27 9.1 5.2 0.32 8.9 5.2 1.0 1 0 0 1 1 1 0 Prominin UPF0184 PF03670.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.29 11.5 5.2 0.33 11.4 4.1 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) DUF948 PF06103.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.31 11.3 3.6 2.4 8.5 0.1 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Prefoldin PF02996.17 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.39 10.6 8.7 0.41 10.6 3.0 2.5 1 1 2 3 3 3 0 Prefoldin subunit DUF724 PF05266.14 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.45 10.3 7.2 1.2 8.9 7.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) NPV_P10 PF05531.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.47 11.0 5.6 4 8.0 2.0 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein FAP206 PF12018.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.51 9.8 5.4 0.58 9.6 5.4 1.0 1 0 0 1 1 1 0 Domain of unknown function Prefoldin_2 PF01920.20 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.55 10.2 12.8 1.2 9.1 2.3 2.3 1 1 2 3 3 3 0 Prefoldin subunit FemAB PF02388.16 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.64 8.8 5.5 0.75 8.6 5.5 1.1 1 0 0 1 1 1 0 FemAB family Spc24 PF08286.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.88 9.8 9.7 0.27 11.5 3.8 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 HR1 PF02185.16 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 2.4 8.3 12.4 14 5.9 2.3 2.3 1 1 1 2 2 2 0 Hr1 repeat DASH_Dam1 PF08653.10 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 2.5 8.0 4.5 9.7 6.1 1.4 2.2 1 1 1 2 2 2 0 DASH complex subunit Dam1 XhlA PF10779.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 2.5 8.4 11.8 1.7 8.9 8.3 2.0 1 1 0 2 2 2 0 Haemolysin XhlA Fzo_mitofusin PF04799.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 3.3 7.2 7.5 2.1 7.9 2.8 1.9 1 1 1 2 2 2 0 fzo-like conserved region bZIP_1 PF00170.21 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 3.6 7.8 12.2 1.8 8.7 4.4 2.3 1 1 1 2 2 2 0 bZIP transcription factor LMBR1 PF04791.16 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 3.6 6.4 6.2 4.2 6.2 6.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein EMP24_GP25L PF01105.24 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 8.7 6.2 10.6 4.4 7.2 3.7 2.0 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD TMEM192 PF14802.6 NODE_58121_length_289_cov_1.881890_g50182_i0forward_frame_3 - 0.051 12.7 0.7 0.062 12.4 0.7 1.2 1 0 0 1 1 1 0 TMEM192 family DUF716 PF04819.12 NODE_58116_length_289_cov_1.956693_g50177_i0forward_frame_2 - 0.031 13.9 4.0 0.041 13.5 4.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF716) T7SS_ESX1_EccB PF05108.13 NODE_58108_length_289_cov_2.110236_g50169_i0reverse_frame_3 - 0.029 13.0 0.4 0.034 12.8 0.4 1.1 1 0 0 1 1 1 0 Type VII secretion system ESX-1, transport TM domain B MFS_1 PF07690.16 NODE_58106_length_289_cov_2.125984_g50167_i0forward_frame_3 - 1.5e-05 24.1 9.6 1.5e-05 24.1 9.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3624 PF12292.8 NODE_58106_length_289_cov_2.125984_g50167_i0forward_frame_3 - 1.1 9.7 4.8 1.3 9.4 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3624) zf-FLZ PF04570.14 NODE_58106_length_289_cov_2.125984_g50167_i0forward_frame_2 - 0.02 14.4 0.3 0.039 13.4 0.3 1.5 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 Glyco_hydro_114 PF03537.13 NODE_58096_length_289_cov_2.314961_g50157_i0reverse_frame_3 - 0.15 11.4 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycoside-hydrolase family GH114 TTC5_OB PF16669.5 NODE_58096_length_289_cov_2.314961_g50157_i0forward_frame_3 - 0.11 12.2 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat protein 5 OB fold domain Asp PF00026.23 NODE_58087_length_289_cov_2.476378_g50148_i0forward_frame_3 - 5.7e-19 68.7 1.1 6.3e-19 68.5 1.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_58087_length_289_cov_2.476378_g50148_i0forward_frame_3 - 9.1e-07 29.3 0.0 1.1e-06 29.0 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Polo_box_3 PF18544.1 NODE_58085_length_289_cov_2.547244_g50146_i0forward_frame_2 - 0.16 12.7 0.4 0.67 10.6 0.1 1.8 1 1 1 2 2 2 0 Polo box domain zf-CCCH PF00642.24 NODE_58084_length_289_cov_2.559055_g50145_i0reverse_frame_3 - 0.02 14.8 3.1 0.049 13.6 3.1 1.7 1 1 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_3 PF15663.5 NODE_58084_length_289_cov_2.559055_g50145_i0reverse_frame_3 - 0.054 13.7 3.4 1.8 8.8 0.8 2.1 1 1 1 2 2 2 0 Zinc-finger containing family Peptidase_S29 PF02907.15 NODE_58084_length_289_cov_2.559055_g50145_i0forward_frame_3 - 0.15 11.8 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease GP88 PF17338.2 NODE_58078_length_289_cov_2.751969_g50139_i0reverse_frame_2 - 0.12 11.8 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Gene product 88 HAD_SAK_2 PF18143.1 NODE_58078_length_289_cov_2.751969_g50139_i0forward_frame_3 - 0.12 12.7 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 HAD domain in Swiss Army Knife RNA repair proteins SBP_bac_3 PF00497.20 NODE_58078_length_289_cov_2.751969_g50139_i0forward_frame_2 - 2.5e-29 102.3 0.0 2.9e-29 102.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 NODE_58078_length_289_cov_2.751969_g50139_i0forward_frame_2 - 2.8e-06 27.5 0.0 0.00021 21.5 0.0 2.0 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site Adeno_IVa2 PF02456.15 NODE_58074_length_289_cov_2.929134_g50135_i0reverse_frame_2 - 0.0011 17.9 0.9 0.0011 17.9 0.9 1.1 1 0 0 1 1 1 1 Adenovirus IVa2 protein Iso_dh PF00180.20 NODE_58069_length_289_cov_3.082677_g50130_i0reverse_frame_2 - 9.1e-24 84.2 0.0 1e-23 84.0 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase KAR9 PF08580.10 NODE_58066_length_289_cov_3.417323_g50127_i0reverse_frame_3 - 0.0012 17.6 0.2 0.0012 17.5 0.2 1.0 1 0 0 1 1 1 1 Yeast cortical protein KAR9 PapD_C PF02753.17 NODE_58064_length_289_cov_3.976378_g50125_i0forward_frame_3 - 1.1e-15 57.7 0.5 1.4e-15 57.3 0.5 1.2 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain DUF5472 PF17566.2 NODE_58063_length_289_cov_4.003937_g50124_i0reverse_frame_3 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) Lambda_Kil PF06301.11 NODE_58060_length_289_cov_11.074803_g50121_i0forward_frame_3 - 0.055 13.1 0.0 0.085 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage lambda Kil protein DUF818 PF05677.12 NODE_58058_length_289_cov_22.452756_g50119_i0reverse_frame_3 - 0.044 12.7 3.0 0.047 12.7 3.0 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) DUF3298 PF11738.8 NODE_58057_length_289_cov_23.523622_g50118_i0reverse_frame_3 - 3 8.9 6.2 0.93 10.6 1.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3298) NIF PF03031.18 NODE_58054_length_289_cov_38.023622_g50115_i0reverse_frame_2 - 0.034 13.9 1.4 0.041 13.6 1.4 1.2 1 0 0 1 1 1 0 NLI interacting factor-like phosphatase Pkinase PF00069.25 NODE_58051_length_289_cov_45.996063_g50112_i0forward_frame_2 - 0.012 15.0 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein kinase domain Cas6 PF09559.10 NODE_58050_length_289_cov_46.637795_g50111_i0reverse_frame_3 - 0.1 12.6 0.1 2.5 8.0 0.0 2.0 1 1 1 2 2 2 0 Cas6 Crispr NBD94 PF16830.5 NODE_58046_length_289_cov_57.283465_g50107_i0forward_frame_2 - 0.049 14.0 1.2 0.064 13.7 0.2 1.6 2 0 0 2 2 2 0 Nucleotide-Binding Domain 94 of RH RFC1 PF08519.12 NODE_58046_length_289_cov_57.283465_g50107_i0forward_frame_2 - 0.073 13.2 0.1 0.11 12.6 0.1 1.4 1 1 0 1 1 1 0 Replication factor RFC1 C terminal domain DnaB_2 PF07261.11 NODE_58046_length_289_cov_57.283465_g50107_i0forward_frame_2 - 0.11 12.2 2.3 1 9.2 0.1 2.4 1 1 2 3 3 3 0 Replication initiation and membrane attachment Ank_2 PF12796.7 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 2.9e-09 37.4 0.0 5e-09 36.6 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 9.9e-09 35.6 0.0 0.00076 20.0 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 2.2e-06 27.5 0.0 0.0013 19.0 0.0 2.9 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 0.0012 19.1 0.0 0.005 17.1 0.0 2.0 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 0.0033 17.8 0.0 0.037 14.5 0.0 2.3 2 1 1 3 3 3 1 Ankyrin repeat UCR_hinge PF02320.16 NODE_58043_length_289_cov_59.972441_g50104_i0reverse_frame_2 - 0.014 15.5 0.0 0.024 14.9 0.0 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein Peptidase_M99_C PF17129.4 NODE_58043_length_289_cov_59.972441_g50104_i0reverse_frame_2 - 0.077 13.2 0.0 0.7 10.1 0.0 1.9 1 1 1 2 2 2 0 C-terminal domain of metallo-carboxypeptidase MVP_shoulder PF11978.8 NODE_58041_length_289_cov_61.039370_g50102_i0reverse_frame_3 - 0.0045 17.0 0.0 0.005 16.9 0.0 1.2 1 0 0 1 1 1 1 Shoulder domain DUF4791 PF16039.5 NODE_58038_length_289_cov_68.240157_g50099_i0reverse_frame_3 - 0.019 14.5 0.0 0.022 14.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4791) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks247.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks247.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks247.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks247.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:08:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AstA PF04958.12 NODE_58036_length_289_cov_69.763780_g50097_i0forward_frame_3 - 0.15 10.6 0.0 0.18 10.3 0.0 1.1 1 0 0 1 1 1 0 Arginine N-succinyltransferase beta subunit Ank_2 PF12796.7 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.0003 21.3 0.0 0.00039 21.0 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.0018 18.6 0.1 0.0066 16.9 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeat TetR_C_20 PF17925.1 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.022 15.1 0.1 0.029 14.7 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Ank PF00023.30 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.024 15.1 0.2 0.11 13.0 0.0 1.9 2 0 0 2 2 2 0 Ankyrin repeat Ank_5 PF13857.6 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.028 14.8 0.1 0.057 13.8 0.1 1.7 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Herpes_heli_pri PF05774.11 NODE_58029_length_289_cov_76.582677_g50090_i0reverse_frame_3 - 0.0072 16.5 0.7 0.0088 16.3 0.7 1.1 1 0 0 1 1 1 1 Herpesvirus helicase-primase complex component Prenyltrans PF00432.21 NODE_58021_length_289_cov_90.177165_g50082_i0reverse_frame_3 - 3.2e-05 23.6 0.0 0.16 11.7 0.0 2.2 2 0 0 2 2 2 2 Prenyltransferase and squalene oxidase repeat IL1 PF00340.19 NODE_58018_length_289_cov_116.362205_g50079_i0reverse_frame_2 - 0.061 13.0 0.6 0.094 12.4 0.1 1.5 2 0 0 2 2 2 0 Interleukin-1 / 18 vWF_A PF12450.8 NODE_58017_length_289_cov_127.208661_g50078_i0forward_frame_2 - 0.1 12.5 0.0 0.15 12.1 0.0 1.5 1 1 0 1 1 1 0 von Willebrand factor YecM PF06185.12 NODE_58015_length_289_cov_156.775591_g50076_i0forward_frame_3 - 0.061 13.0 0.0 0.071 12.8 0.0 1.1 1 0 0 1 1 1 0 YecM protein PHY PF00360.20 NODE_58014_length_289_cov_257.799213_g50075_i0reverse_frame_2 - 0.085 12.2 1.3 0.12 11.7 1.3 1.3 1 0 0 1 1 1 0 Phytochrome region CytB6-F_Fe-S PF08802.10 NODE_58014_length_289_cov_257.799213_g50075_i0forward_frame_3 - 7.3e-06 25.9 5.5 2.7e-05 24.1 0.2 2.7 3 0 0 3 3 3 2 Cytochrome B6-F complex Fe-S subunit Gag_p10 PF02337.17 NODE_58014_length_289_cov_257.799213_g50075_i0forward_frame_2 - 0.13 12.3 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Retroviral GAG p10 protein PALP PF00291.25 NODE_58013_length_289_cov_258.354331_g50074_i0reverse_frame_3 - 2.2e-06 27.3 0.0 2.5e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF5543 PF17697.1 NODE_58011_length_289_cov_740.204724_g50072_i0reverse_frame_2 - 0.028 14.7 5.5 0.032 14.5 5.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5543) Melittin PF01372.17 NODE_58008_length_289_cov_1999.578740_g50069_i0reverse_frame_2 - 4.2 7.5 5.5 11 6.2 0.5 2.4 2 0 0 2 2 2 0 Melittin SCIMP PF15050.6 NODE_58008_length_289_cov_1999.578740_g50069_i0forward_frame_3 - 0.21 12.1 0.2 0.33 11.4 0.2 1.3 1 0 0 1 1 1 0 SCIMP protein YjeF_N PF03853.15 NODE_58006_length_290_cov_1.098039_g50067_i0forward_frame_3 - 1e-06 28.8 0.0 1.4e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 YjeF-related protein N-terminus cNMP_binding PF00027.29 NODE_58005_length_290_cov_1.105882_g50066_i0forward_frame_3 - 0.00035 20.6 0.0 0.00046 20.2 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MarR PF01047.22 NODE_58004_length_290_cov_1.152941_g50065_i0reverse_frame_3 - 1.2 9.1 12.1 2.6 8.1 0.1 3.9 4 0 0 4 4 4 0 MarR family HRDC PF00570.23 NODE_58004_length_290_cov_1.152941_g50065_i0reverse_frame_3 - 1.7 8.7 7.2 12 6.0 0.7 2.5 2 0 0 2 2 2 0 HRDC domain DUF5088 PF17008.5 NODE_58003_length_290_cov_1.156863_g50064_i0reverse_frame_2 - 0.0082 15.9 0.1 0.0093 15.7 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5088) DUF543 PF04418.12 NODE_58002_length_290_cov_1.196078_g50063_i0forward_frame_2 - 1.2 9.2 4.8 9.2 6.3 1.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF543) MFS_1 PF07690.16 NODE_58000_length_290_cov_1.239216_g50061_i0reverse_frame_2 - 0.0013 17.7 1.4 0.0014 17.6 1.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily BA14K PF07886.11 NODE_57998_length_290_cov_1.254902_g50059_i0reverse_frame_2 - 0.025 14.4 1.0 0.051 13.5 1.0 1.5 1 0 0 1 1 1 0 BA14K-like protein Dcc1 PF09724.9 NODE_57990_length_290_cov_1.513725_g50051_i0forward_frame_3 - 0.036 13.4 0.0 0.04 13.2 0.0 1.0 1 0 0 1 1 1 0 Sister chromatid cohesion protein Dcc1 NAD_binding_6 PF08030.12 NODE_57989_length_290_cov_1.533333_g50050_i0reverse_frame_3 - 0.074 13.2 0.0 0.085 13.0 0.0 1.1 1 0 0 1 1 1 0 Ferric reductase NAD binding domain EH_Signature PF15611.6 NODE_57989_length_290_cov_1.533333_g50050_i0forward_frame_3 - 0.039 13.4 0.0 0.041 13.3 0.0 1.1 1 0 0 1 1 1 0 EH_Signature domain HEAT PF02985.22 NODE_57989_length_290_cov_1.533333_g50050_i0forward_frame_3 - 0.06 13.6 0.0 0.54 10.7 0.0 2.2 2 0 0 2 2 2 0 HEAT repeat Tobravirus_2B PF05271.11 NODE_57987_length_290_cov_1.666667_g50048_i0forward_frame_3 - 0.016 15.1 0.1 0.018 14.9 0.1 1.2 1 0 0 1 1 1 0 Tobravirus 2B protein RuvC_III PF18541.1 NODE_57986_length_290_cov_1.674510_g50047_i0reverse_frame_3 - 0.016 15.1 0.5 0.27 11.1 0.5 2.0 1 1 0 1 1 1 0 RuvC endonuclease subdomain 3 AAA_lid_2 PF17863.1 NODE_57985_length_290_cov_1.690196_g50046_i0forward_frame_3 - 0.11 12.4 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 AAA lid domain AT_hook PF02178.19 NODE_57981_length_290_cov_1.756863_g50042_i0forward_frame_3 - 0.019 14.7 2.1 0.02 14.7 0.1 2.2 2 0 0 2 2 2 0 AT hook motif zf-C3HC4_2 PF13923.6 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_3 - 0.02 14.7 3.0 0.02 14.7 3.0 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_3 - 0.029 14.7 2.8 0.029 14.7 2.8 1.6 2 0 0 2 2 2 0 Ring finger domain Symplekin_C PF12295.8 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_2 - 0.048 13.7 0.1 0.069 13.2 0.1 1.3 1 1 0 1 1 1 0 Symplekin tight junction protein C terminal DUF726 PF05277.12 NODE_57978_length_290_cov_1.800000_g50039_i0reverse_frame_3 - 1.3 7.9 4.4 1.4 7.8 4.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Ank PF00023.30 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 6.4e-13 48.5 0.0 4.7e-09 36.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 2.3e-12 47.3 0.2 3.2e-12 46.9 0.2 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 3.1e-12 46.8 0.4 5.4e-07 30.0 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 1.4e-11 43.6 0.1 3.7e-07 29.9 0.1 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 2.4e-09 37.2 0.2 4.8e-09 36.3 0.2 1.5 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Cue1_U7BR PF18499.1 NODE_57972_length_290_cov_1.956863_g50033_i0reverse_frame_2 - 0.0034 17.4 0.2 0.0055 16.7 0.2 1.3 1 0 0 1 1 1 1 Ubc7p-binding region of Cue1 GPHR_N PF12537.8 NODE_57972_length_290_cov_1.956863_g50033_i0forward_frame_3 - 0.032 14.3 0.0 0.053 13.6 0.0 1.4 1 0 0 1 1 1 0 The Golgi pH Regulator (GPHR) Family N-terminal Wzz PF02706.15 NODE_57963_length_290_cov_2.227451_g50024_i0reverse_frame_3 - 0.094 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Chain length determinant protein MBD PF01429.19 NODE_57963_length_290_cov_2.227451_g50024_i0forward_frame_3 - 0.035 13.8 0.1 0.038 13.7 0.1 1.2 1 0 0 1 1 1 0 Methyl-CpG binding domain Pns11_12 PF17464.2 NODE_57962_length_290_cov_2.329412_g50023_i0forward_frame_3 - 0.57 9.9 10.7 0.68 9.6 10.7 1.1 1 0 0 1 1 1 0 Non-structural protein 11 and 12 MDFI PF15316.6 NODE_57962_length_290_cov_2.329412_g50023_i0forward_frame_3 - 4.8 7.3 8.3 5.4 7.1 8.3 1.1 1 0 0 1 1 1 0 MyoD family inhibitor PCO_ADO PF07847.12 NODE_57958_length_290_cov_2.427451_g50019_i0reverse_frame_2 - 6.3e-08 32.3 0.0 8.2e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 PCO_ADO DUF1757 PF08560.10 NODE_57955_length_290_cov_2.647059_g50016_i0forward_frame_3 - 0.23 11.5 0.9 0.27 11.3 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1757) Cyt_bd_oxida_I PF01654.17 NODE_57954_length_290_cov_2.647059_g50015_i0reverse_frame_2 - 9.1e-17 60.8 0.8 1.1e-16 60.6 0.8 1.1 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I Co_AT_N PF12557.8 NODE_57954_length_290_cov_2.647059_g50015_i0forward_frame_2 - 0.086 12.8 2.1 0.14 12.1 2.1 1.3 1 0 0 1 1 1 0 Cob(I)alamin adenosyltransferase N terminal ADH_zinc_N PF00107.26 NODE_57952_length_290_cov_2.776471_g50013_i0reverse_frame_2 - 8.3e-12 45.2 0.0 1e-11 44.9 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase SecD_SecF PF02355.16 NODE_57952_length_290_cov_2.776471_g50013_i0reverse_frame_2 - 0.22 10.9 0.1 0.89 8.9 0.0 1.8 2 0 0 2 2 2 0 Protein export membrane protein AP_endonuc_2 PF01261.24 NODE_57949_length_290_cov_3.137255_g50010_i0reverse_frame_3 - 4.7e-11 42.5 0.1 6e-11 42.2 0.1 1.0 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF4077 PF13295.6 NODE_57948_length_290_cov_3.250980_g50009_i0reverse_frame_2 - 0.028 14.4 0.3 0.028 14.3 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) Cullin PF00888.22 NODE_57946_length_290_cov_3.384314_g50007_i0forward_frame_2 - 0.009 14.7 0.3 0.009 14.7 0.3 1.0 1 0 0 1 1 1 1 Cullin family Antimicrobial_9 PF08104.11 NODE_57943_length_290_cov_3.501961_g50004_i0reverse_frame_2 - 0.17 11.9 1.3 0.29 11.2 1.3 1.3 1 0 0 1 1 1 0 Ponericin L family UPF0029 PF01205.19 NODE_57942_length_290_cov_3.560784_g50003_i0reverse_frame_3 - 3.8e-15 56.1 0.1 4.7e-15 55.8 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 zf-NF-X1 PF01422.17 NODE_57942_length_290_cov_3.560784_g50003_i0forward_frame_3 - 0.32 11.1 3.6 0.8 9.8 3.6 1.6 1 0 0 1 1 1 0 NF-X1 type zinc finger MatE PF01554.18 NODE_57941_length_290_cov_3.952941_g50002_i0reverse_frame_2 - 0.023 14.4 0.6 0.023 14.4 0.6 1.6 2 0 0 2 2 2 0 MatE DUF2256 PF10013.9 NODE_57937_length_290_cov_7.564706_g49998_i0reverse_frame_3 - 1.7 8.8 0.0 1.7 8.8 0.0 3.8 4 1 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2256) NIR_SIR_ferr PF03460.17 NODE_57937_length_290_cov_7.564706_g49998_i0reverse_frame_2 - 0.038 13.9 0.1 0.09 12.6 0.1 1.7 1 1 0 1 1 1 0 Nitrite/Sulfite reductase ferredoxin-like half domain ORMDL PF04061.14 NODE_57933_length_290_cov_34.274510_g49994_i0reverse_frame_2 - 0.036 13.9 1.7 0.042 13.7 0.9 1.5 1 1 0 1 1 1 0 ORMDL family Telomerase_RBD PF12009.8 NODE_57932_length_290_cov_37.211765_g49993_i0reverse_frame_3 - 0.11 12.6 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Telomerase ribonucleoprotein complex - RNA binding domain ATG16 PF08614.11 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.0019 18.5 3.0 0.0025 18.1 3.0 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF5082 PF16888.5 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.0045 17.3 1.0 0.0056 17.0 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) DUF641 PF04859.12 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.031 14.6 2.1 0.045 14.1 2.1 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF948 PF06103.11 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.039 14.2 0.5 0.055 13.7 0.5 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) SlyX PF04102.12 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.13 12.9 0.5 0.19 12.4 0.5 1.2 1 0 0 1 1 1 0 SlyX ERG4_ERG24 PF01222.17 NODE_57927_length_290_cov_44.658824_g49988_i0reverse_frame_2 - 0.15 10.8 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family PPR_2 PF13041.6 NODE_57927_length_290_cov_44.658824_g49988_i0forward_frame_2 - 0.015 15.5 0.0 0.026 14.7 0.0 1.5 1 0 0 1 1 1 0 PPR repeat family DUF5494 PF17598.2 NODE_57925_length_290_cov_48.796078_g49986_i0reverse_frame_3 - 0.081 13.0 2.5 0.098 12.8 2.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5494) ArsD PF06953.11 NODE_57925_length_290_cov_48.796078_g49986_i0reverse_frame_2 - 0.011 16.1 0.0 0.012 16.0 0.0 1.2 1 0 0 1 1 1 0 Arsenical resistance operon trans-acting repressor ArsD RCDG1 PF15725.5 NODE_57923_length_290_cov_59.011765_g49984_i0forward_frame_2 - 0.044 14.2 2.3 0.075 13.5 2.3 1.4 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein Arm_3 PF16186.5 NODE_57919_length_290_cov_72.078431_g49980_i0forward_frame_3 - 1.5e-05 24.4 1.0 2.2e-05 23.9 1.0 1.2 1 0 0 1 1 1 1 Atypical Arm repeat GLE1 PF07817.13 NODE_57918_length_290_cov_72.219608_g49979_i0forward_frame_2 - 0.026 13.8 0.0 0.031 13.5 0.0 1.0 1 0 0 1 1 1 0 GLE1-like protein DUF1286 PF06939.11 NODE_57917_length_290_cov_73.627451_g49978_i0reverse_frame_3 - 0.02 15.1 2.2 0.03 14.6 2.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1286) ALMT PF11744.8 NODE_57917_length_290_cov_73.627451_g49978_i0reverse_frame_3 - 0.17 10.7 2.2 0.22 10.3 2.2 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter BNR_2 PF13088.6 NODE_57917_length_290_cov_73.627451_g49978_i0forward_frame_3 - 0.059 12.7 0.0 0.063 12.6 0.0 1.0 1 0 0 1 1 1 0 BNR repeat-like domain PMG PF05287.12 NODE_57911_length_290_cov_81.450980_g49972_i0forward_frame_3 - 0.11 12.6 3.1 0.13 12.3 3.1 1.1 1 0 0 1 1 1 0 PMG protein DUF4560 PF15118.6 NODE_57908_length_290_cov_101.219608_g49969_i0reverse_frame_3 - 0.028 14.3 0.3 0.043 13.7 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4560) TT_ORF1 PF02956.14 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_3 - 3 6.4 12.2 3 6.4 12.2 1.0 1 0 0 1 1 1 0 TT viral orf 1 RNA_polI_A34 PF08208.11 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.074 13.1 21.4 0.077 13.1 21.4 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 RNA_pol_Rpc4 PF05132.14 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.16 12.4 7.7 0.18 12.3 7.7 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 PcfK PF14058.6 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.36 11.1 14.9 0.42 10.9 14.9 1.0 1 0 0 1 1 1 0 PcfK-like protein DDHD PF02862.17 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.37 10.9 4.4 0.39 10.8 4.4 1.0 1 0 0 1 1 1 0 DDHD domain AAA_11 PF13086.6 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.78 9.5 8.0 0.8 9.4 8.0 1.0 1 0 0 1 1 1 0 AAA domain PPL5 PF18168.1 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 1.3 8.3 8.2 1.4 8.2 8.2 1.0 1 0 0 1 1 1 0 Prim-pol family 5 RR_TM4-6 PF06459.12 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 1.3 8.8 12.6 1.5 8.6 12.6 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 2.5 6.8 10.0 2.9 6.6 10.0 1.0 1 0 0 1 1 1 0 Presenilin DUF913 PF06025.12 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 2.8 6.8 6.3 3.1 6.7 6.3 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF2828 PF11443.8 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 7.2 4.6 13.4 8 4.4 13.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) EOS1 PF12326.8 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 7.8 6.4 7.0 8.6 6.2 7.0 1.1 1 0 0 1 1 1 0 N-glycosylation protein Coilin_N PF15862.5 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 8.3 6.2 22.3 10 5.9 22.3 1.1 1 0 0 1 1 1 0 Coilin N-terminus NPR3 PF03666.13 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 10 4.8 15.7 11 4.6 15.7 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 HAD_SAK_2 PF18143.1 NODE_57904_length_290_cov_116.321569_g49965_i0forward_frame_2 - 2.1e-05 24.9 0.0 3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins DUF2052 PF09747.9 NODE_57898_length_290_cov_295.513725_g49959_i0reverse_frame_3 - 0.0014 18.8 4.2 0.0017 18.5 4.2 1.1 1 0 0 1 1 1 1 Coiled-coil domain containing protein (DUF2052) DOR PF14839.6 NODE_57898_length_290_cov_295.513725_g49959_i0reverse_frame_3 - 0.038 13.9 1.2 0.036 14.0 1.2 1.1 1 0 0 1 1 1 0 DOR family YqfQ PF14181.6 NODE_57898_length_290_cov_295.513725_g49959_i0reverse_frame_3 - 0.09 13.0 8.3 0.12 12.6 8.3 1.1 1 0 0 1 1 1 0 YqfQ-like protein DUF3000 PF11452.8 NODE_57896_length_290_cov_314.231373_g49957_i0reverse_frame_3 - 0.03 13.8 0.1 0.053 13.0 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) DUF4768 PF15989.5 NODE_57886_length_291_cov_0.886719_g49947_i0reverse_frame_2 - 0.12 12.4 3.2 3.5 7.6 1.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4768) Alpha_TIF PF02232.15 NODE_57885_length_291_cov_0.902344_g49946_i0forward_frame_2 - 0.065 12.3 0.2 0.068 12.3 0.2 1.0 1 0 0 1 1 1 0 Alpha trans-inducing protein (Alpha-TIF) Phage_int_SAM_5 PF13102.6 NODE_57884_length_291_cov_0.933594_g49945_i0forward_frame_2 - 0.15 12.4 3.9 0.78 10.1 3.4 1.9 1 1 1 2 2 2 0 Phage integrase SAM-like domain DUF4199 PF13858.6 NODE_57883_length_291_cov_0.968750_g49944_i0forward_frame_3 - 0.13 12.7 4.2 0.16 12.4 4.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) VP_N-CPKC PF11475.8 NODE_57881_length_291_cov_1.207031_g49942_i0forward_frame_3 - 0.26 11.2 2.4 4.8 7.2 0.2 2.5 2 1 0 2 2 2 0 Virion protein N terminal domain TAFII55_N PF04658.13 NODE_57877_length_291_cov_1.250000_g49938_i0reverse_frame_2 - 0.01 15.6 0.7 0.013 15.2 0.7 1.2 1 0 0 1 1 1 0 TAFII55 protein conserved region ALC PF17527.2 NODE_57873_length_291_cov_1.359375_g49934_i0reverse_frame_2 - 0.064 12.9 0.1 0.08 12.6 0.1 1.1 1 0 0 1 1 1 0 Phage ALC protein Lig_chan-Glu_bd PF10613.9 NODE_57873_length_291_cov_1.359375_g49934_i0reverse_frame_2 - 0.073 13.3 0.0 0.081 13.1 0.0 1.1 1 0 0 1 1 1 0 Ligated ion channel L-glutamate- and glycine-binding site Ald_Xan_dh_C2 PF02738.18 NODE_57871_length_291_cov_1.371094_g49932_i0reverse_frame_3 - 0.016 13.7 0.0 0.019 13.5 0.0 1.0 1 0 0 1 1 1 0 Molybdopterin-binding domain of aldehyde dehydrogenase Rho_GDI PF02115.17 NODE_57870_length_291_cov_1.386719_g49931_i0forward_frame_2 - 0.12 12.1 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 RHO protein GDP dissociation inhibitor ParD_antitoxin PF03693.14 NODE_57863_length_291_cov_1.546875_g49924_i0reverse_frame_3 - 0.014 15.8 0.1 0.022 15.1 0.1 1.3 1 1 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 3Beta_HSD PF01073.19 NODE_57861_length_291_cov_1.558594_g49922_i0forward_frame_3 - 1.8e-09 37.0 0.0 1.9e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 NODE_57861_length_291_cov_1.558594_g49922_i0forward_frame_3 - 8e-08 32.4 0.0 8.4e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 NODE_57861_length_291_cov_1.558594_g49922_i0forward_frame_3 - 3.1e-07 30.1 0.0 3.4e-07 30.0 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 NODE_57861_length_291_cov_1.558594_g49922_i0forward_frame_3 - 0.001 18.3 0.0 0.0011 18.2 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein DUF4881 PF16222.5 NODE_57859_length_291_cov_1.597656_g49920_i0forward_frame_2 - 0.0094 15.8 0.1 0.01 15.7 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4881) DUF2508 PF10704.9 NODE_57857_length_291_cov_1.714844_g49918_i0forward_frame_3 - 0.12 12.5 0.1 0.18 12.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2508) PIG-P PF08510.12 NODE_57856_length_291_cov_1.734375_g49917_i0reverse_frame_3 - 0.35 10.8 4.3 0.45 10.4 4.3 1.2 1 0 0 1 1 1 0 PIG-P CSD PF00313.22 NODE_57855_length_291_cov_1.734375_g49916_i0forward_frame_2 - 1.5e-10 40.8 0.1 2e-10 40.4 0.1 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 NODE_57855_length_291_cov_1.734375_g49916_i0forward_frame_2 - 0.00028 20.5 0.0 0.00038 20.1 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF5353 PF17304.2 NODE_57854_length_291_cov_1.738281_g49915_i0reverse_frame_3 - 0.0048 16.6 0.3 0.0097 15.6 0.3 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5353) DUF229 PF02995.17 NODE_57854_length_291_cov_1.738281_g49915_i0forward_frame_2 - 1.4e-06 27.3 0.1 1.4e-06 27.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) DUF2949 PF11165.8 NODE_57849_length_291_cov_1.855469_g49910_i0forward_frame_3 - 0.18 12.2 0.0 0.25 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2949) zf-RVT PF13966.6 NODE_57848_length_291_cov_1.878906_g49909_i0reverse_frame_3 - 0.019 15.7 1.3 0.034 14.9 1.3 1.5 1 1 0 1 1 1 0 zinc-binding in reverse transcriptase BPD_transp_1 PF00528.22 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 1.9e-07 31.0 2.6 1.9e-07 31.0 2.6 1.3 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Yip1 PF04893.17 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 0.002 17.9 5.0 0.0022 17.7 5.0 1.1 1 0 0 1 1 1 1 Yip1 domain ECF_trnsprt PF12822.7 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 0.0038 17.3 4.6 0.0046 17.1 4.6 1.1 1 0 0 1 1 1 1 ECF transporter, substrate-specific component DUF3021 PF11457.8 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 0.022 15.1 0.9 0.028 14.8 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF3278 PF11683.8 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 0.29 11.2 2.0 0.39 10.8 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3278) CCG PF02754.16 NODE_57847_length_291_cov_1.910156_g49908_i0forward_frame_3 - 0.034 14.4 0.3 0.051 13.8 0.3 1.3 1 0 0 1 1 1 0 Cysteine-rich domain DUF4110 PF13422.6 NODE_57841_length_291_cov_2.039062_g49902_i0reverse_frame_3 - 0.077 13.1 0.2 0.092 12.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4110) DUF5408 PF17402.2 NODE_57840_length_291_cov_2.050781_g49901_i0reverse_frame_2 - 0.024 14.5 0.9 0.032 14.1 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5408) DCP2 PF05026.13 NODE_57839_length_291_cov_2.066406_g49900_i0reverse_frame_3 - 1.3e-14 54.3 3.6 1.5e-14 54.1 3.6 1.1 1 0 0 1 1 1 1 Dcp2, box A domain DUF4083 PF13314.6 NODE_57837_length_291_cov_2.144531_g49898_i0reverse_frame_3 - 0.82 9.7 5.3 1.7 8.6 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) zf-CCHC_6 PF15288.6 NODE_57833_length_291_cov_2.335938_g49894_i0reverse_frame_3 - 3.8 7.4 7.3 48 3.9 7.3 2.2 1 1 0 1 1 1 0 Zinc knuckle IGF2_C PF08365.11 NODE_57833_length_291_cov_2.335938_g49894_i0forward_frame_3 - 0.1 12.6 0.9 0.17 11.9 0.9 1.5 1 1 0 1 1 1 0 Insulin-like growth factor II E-peptide zf-H2C2_2 PF13465.6 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 0.0025 18.1 0.1 0.0025 18.1 0.1 2.6 1 1 1 2 2 2 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 0.44 11.5 7.2 0.69 10.9 0.1 3.0 3 0 0 3 3 3 0 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 0.82 10.3 7.0 9.9 6.8 0.0 3.3 3 0 0 3 3 3 0 Zinc finger, C2H2 type DUF4880 PF16220.5 NODE_57828_length_291_cov_2.457031_g49889_i0reverse_frame_3 - 0.053 13.4 2.5 0.1 12.5 2.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4880) Acylphosphatase PF00708.18 NODE_57827_length_291_cov_2.531250_g49888_i0reverse_frame_2 - 4.5e-09 36.6 0.5 7.2e-09 35.9 0.5 1.3 1 0 0 1 1 1 1 Acylphosphatase CD52 PF15116.6 NODE_57824_length_291_cov_2.867188_g49885_i0forward_frame_2 - 0.35 10.9 3.2 0.64 10.1 3.2 1.5 1 0 0 1 1 1 0 CAMPATH-1 antigen UDPG_MGDP_dh_N PF03721.14 NODE_57818_length_291_cov_3.121094_g49879_i0reverse_frame_3 - 3.8e-10 39.6 0.7 4.2e-10 39.5 0.7 1.0 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Glyco_hydro_4 PF02056.16 NODE_57818_length_291_cov_3.121094_g49879_i0reverse_frame_3 - 0.0052 16.4 0.2 0.0086 15.7 0.1 1.4 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase EspA PF03433.13 NODE_57815_length_291_cov_4.027344_g49876_i0forward_frame_3 - 0.036 13.9 2.8 0.042 13.7 2.6 1.3 1 1 0 1 1 1 0 EspA-like secreted protein DUF4456 PF14644.6 NODE_57808_length_291_cov_20.757812_g49869_i0reverse_frame_3 - 0.017 14.9 0.1 0.02 14.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4456) BBE PF08031.12 NODE_57804_length_291_cov_41.250000_g49865_i0reverse_frame_3 - 0.022 14.8 0.4 0.4 10.8 0.0 2.2 2 0 0 2 2 2 0 Berberine and berberine like DUF443 PF04276.12 NODE_57803_length_291_cov_42.062500_g49864_i0forward_frame_3 - 2.5 7.9 6.7 2.1 8.1 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF443) UMPH-1 PF05822.12 NODE_57801_length_291_cov_52.664062_g49862_i0reverse_frame_3 - 0.075 12.5 0.2 0.087 12.3 0.2 1.1 1 0 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) DUF4175 PF13779.6 NODE_57798_length_291_cov_57.976563_g49859_i0forward_frame_3 - 0.12 10.2 0.0 0.14 10.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) PAP1 PF08601.10 NODE_57797_length_291_cov_58.230469_g49858_i0reverse_frame_3 - 7.1 6.3 9.4 9.7 5.8 9.4 1.2 1 0 0 1 1 1 0 Transcription factor PAP1 Copine PF07002.16 NODE_57796_length_291_cov_58.554688_g49857_i0reverse_frame_2 - 1.1e-10 41.3 0.0 1.3e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 Copine PPR_2 PF13041.6 NODE_57791_length_291_cov_65.394531_g49852_i0reverse_frame_2 - 0.02 15.1 0.0 0.033 14.4 0.0 1.3 1 0 0 1 1 1 0 PPR repeat family HflK_N PF12221.8 NODE_57789_length_291_cov_70.945312_g49850_i0reverse_frame_3 - 0.088 12.8 0.1 0.16 12.0 0.1 1.5 1 0 0 1 1 1 0 Bacterial membrane protein N terminal 2OG-FeII_Oxy_3 PF13640.6 NODE_57789_length_291_cov_70.945312_g49850_i0reverse_frame_2 - 1.5e-07 32.2 0.0 1.9e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 NODE_57789_length_291_cov_70.945312_g49850_i0reverse_frame_2 - 0.0049 17.3 0.0 0.006 17.1 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Gcn1_N PF12074.8 NODE_57782_length_291_cov_84.625000_g49843_i0reverse_frame_3 - 0.031 13.6 0.0 0.036 13.4 0.0 1.0 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal EGF_CA PF07645.15 NODE_57779_length_291_cov_93.300781_g49840_i0reverse_frame_2 - 0.071 13.3 1.7 0.092 13.0 0.3 1.9 2 1 0 2 2 2 0 Calcium-binding EGF domain Mut7-C PF01927.16 NODE_57778_length_291_cov_99.527344_g49839_i0reverse_frame_3 - 0.13 12.4 1.0 0.16 12.1 0.4 1.4 1 1 0 1 1 1 0 Mut7-C RNAse domain RTC4 PF14474.6 NODE_57770_length_291_cov_172.675781_g49831_i0reverse_frame_3 - 0.078 13.1 1.2 0.12 12.6 1.2 1.3 1 0 0 1 1 1 0 RTC4-like domain zf-B_box PF00643.24 NODE_57769_length_291_cov_181.984375_g49830_i0forward_frame_3 - 0.066 13.4 1.0 0.091 12.9 1.0 1.2 1 0 0 1 1 1 0 B-box zinc finger DUF1768 PF08719.11 NODE_57768_length_291_cov_192.152344_g49829_i0reverse_frame_3 - 2.5e-12 47.3 0.2 3.4e-12 46.9 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) UCH PF00443.29 NODE_57767_length_291_cov_210.539062_g49828_i0reverse_frame_3 - 0.0004 19.9 0.1 0.00049 19.7 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF3844 PF12955.7 NODE_57766_length_291_cov_235.496094_g49827_i0reverse_frame_2 - 0.069 13.3 1.0 0.092 12.9 0.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3844) RAMP4 PF06624.12 NODE_57765_length_291_cov_261.875000_g49826_i0reverse_frame_2 - 0.077 13.1 0.2 0.11 12.5 0.2 1.3 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 TRP PF06011.12 ORF98886 - 2.1e-05 23.5 2.2 2.3e-05 23.3 2.2 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Polysacc_synt_C PF14667.6 ORF98886 - 0.022 14.8 2.3 0.026 14.6 2.3 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain EcsB PF05975.12 ORF98886 - 0.15 10.9 5.3 0.17 10.7 5.3 1.0 1 0 0 1 1 1 0 Bacterial ABC transporter protein EcsB MgtE PF01769.16 ORF98886 - 0.27 11.6 4.5 0.49 10.8 4.5 1.5 1 1 0 1 1 1 0 Divalent cation transporter DUF4229 PF14012.6 ORF98886 - 4.7 7.4 8.7 3.5 7.8 3.6 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4229) zf-CCHC_6 PF15288.6 ORF98651 - 0.2 11.5 0.2 0.2 11.5 0.2 2.0 3 0 0 3 3 3 0 Zinc knuckle WD40_like PF17005.5 ORF98442 - 0.038 13.3 0.6 0.04 13.2 0.6 1.0 1 0 0 1 1 1 0 WD40-like domain Tiam_CC_Ex PF18385.1 ORF98442 - 0.094 13.1 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 T-lymphoma invasion and metastasis CC-Ex domain MORN PF02493.20 ORF98395 - 8.5e-09 34.8 18.9 1.6e-06 27.7 1.0 2.6 3 0 0 3 3 3 2 MORN repeat DUF3048_C PF17479.2 ORF98395 - 0.0032 17.8 2.4 0.024 15.0 0.2 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF3048) C-terminal domain Abhydrolase_1 PF00561.20 ORF98371 - 0.0023 17.6 0.0 0.0024 17.5 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold FSH1 PF03959.13 ORF98371 - 0.0024 17.6 0.0 0.0026 17.5 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S9 PF00326.21 ORF98371 - 0.0038 16.7 0.0 0.004 16.7 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 ORF98371 - 0.0074 16.1 0.0 0.0074 16.1 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 ORF98371 - 0.086 12.1 0.0 0.088 12.1 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 LIP PF03583.14 ORF98371 - 0.2 10.9 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Secretory lipase Synaptobrevin PF00957.21 ORF98308 - 1.7 8.5 4.8 2.1 8.2 0.1 2.5 2 1 1 3 3 3 0 Synaptobrevin Flp1_like PF16982.5 ORF98308 - 3.5 7.1 9.8 5.5 6.5 0.0 2.4 2 0 0 2 2 2 0 Putative Flagellin, Flp1-like, domain MORN PF02493.20 ORF971 - 5e-08 32.4 20.6 0.00052 19.8 3.4 3.9 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 ORF971 - 0.21 11.3 3.9 4.5 7.0 0.1 2.3 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain MIG-14_Wnt-bd PF06664.12 ORF96875 - 0.013 14.7 0.0 0.016 14.5 0.0 1.0 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion FAM216B PF15107.6 ORF96875 - 0.028 14.3 0.0 0.04 13.8 0.0 1.2 1 0 0 1 1 1 0 FAM216B protein family DUF4598 PF15370.6 ORF96182 - 0.1 13.1 0.2 0.11 13.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4598) Glyco_hydro_38N PF01074.22 ORF96054 - 2.9e-29 102.3 1.2 3.2e-29 102.2 1.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Polysacc_deac_1 PF01522.21 ORF96054 - 0.0081 16.1 0.0 0.0084 16.0 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide deacetylase Usp PF00582.26 ORF95682 - 0.11 13.0 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Universal stress protein family DUF5359 PF17313.2 ORF94561 - 0.17 11.9 1.9 0.28 11.2 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5359) EF-hand_7 PF13499.6 ORF93800 - 5.9e-16 58.7 4.3 1.1e-11 45.0 1.6 1.7 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF93800 - 2.8e-14 51.5 3.5 4.1e-07 29.1 1.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF93800 - 6.5e-14 50.7 2.9 3.6e-06 26.2 0.7 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF93800 - 1.2e-12 46.6 4.5 6.4e-06 25.7 0.0 2.5 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF93800 - 3.7e-09 36.3 2.8 7.5e-05 22.5 0.3 2.2 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF93800 - 0.00027 21.2 0.1 0.00057 20.2 0.1 1.6 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF93800 - 0.01 15.7 0.9 3.6 7.5 0.1 2.4 2 0 0 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF93800 - 0.014 15.3 2.6 1.1 9.2 0.1 2.1 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand RelB_N PF18506.1 ORF93800 - 0.017 14.9 0.7 0.29 11.0 0.7 2.4 1 1 0 1 1 1 0 RelB Antitoxin alpha helical domain DUF1007 PF06226.13 ORF93800 - 0.035 14.1 1.3 0.62 10.0 0.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1007) FAINT PF04385.15 ORF93656 - 0.031 14.3 0.1 0.038 14.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function, DUF529 COS PF18568.1 ORF92130 - 0.13 12.2 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 TRIM C-terminal subgroup One Signature domain SAP PF02037.27 ORF91807 - 6.9e-12 44.8 0.3 9.3e-12 44.4 0.3 1.2 1 0 0 1 1 1 1 SAP domain Telomere_Sde2_2 PF13297.6 ORF91807 - 0.00016 21.2 0.1 0.00025 20.6 0.1 1.3 1 0 0 1 1 1 1 Telomere stability C-terminal PASTA PF03793.19 ORF91807 - 0.081 12.8 0.1 0.3 11.0 0.0 1.9 2 0 0 2 2 2 0 PASTA domain Ish1 PF10281.9 ORF91807 - 0.11 12.8 0.7 0.23 11.8 0.4 1.8 1 1 0 1 1 1 0 Putative stress-responsive nuclear envelope protein PetN PF03742.14 ORF91797 - 4.7e-09 36.0 3.6 1e-08 34.9 3.6 1.6 1 0 0 1 1 1 1 PetN HlyD_D23 PF16576.5 ORF91201 - 0.077 12.2 0.0 0.089 12.0 0.0 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion DUF4598 PF15370.6 ORF89098 - 0.1 13.1 0.2 0.11 13.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4598) Polysacc_deac_1 PF01522.21 ORF87817 - 0.035 14.0 0.3 0.046 13.6 0.3 1.2 1 0 0 1 1 1 0 Polysaccharide deacetylase DUF1664 PF07889.12 ORF87817 - 0.18 11.9 4.5 0.16 12.0 2.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 ORF87817 - 0.31 11.6 6.1 0.43 11.1 6.1 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region Med9 PF07544.13 ORF87817 - 0.33 11.1 6.2 3 8.0 0.4 2.1 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 GldM_N PF12081.8 ORF87313 - 0.0012 19.0 2.6 0.0014 18.7 2.6 1.2 1 1 0 1 1 1 1 GldM N-terminal domain MIF4G_like_2 PF09090.11 ORF87313 - 0.013 15.0 0.7 0.015 14.8 0.7 1.1 1 0 0 1 1 1 0 MIF4G like zf-C2H2_aberr PF17017.5 ORF87313 - 0.022 14.9 0.3 0.025 14.7 0.3 1.1 1 0 0 1 1 1 0 Aberrant zinc-finger bZIP_1 PF00170.21 ORF87313 - 0.044 13.9 1.0 0.044 13.9 1.0 1.7 2 0 0 2 2 2 0 bZIP transcription factor DUF2175 PF09943.9 ORF87313 - 0.1 12.9 1.0 0.12 12.7 1.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) FlaC_arch PF05377.11 ORF87313 - 0.1 13.0 0.9 0.1 13.0 0.9 2.1 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) PspB PF06667.12 ORF87313 - 0.41 10.7 2.4 0.4 10.8 1.4 1.6 1 1 1 2 2 2 0 Phage shock protein B # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks248.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks248.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks248.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks248.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ABC_tran PF00005.27 ORF86210 - 1.1e-11 45.4 0.0 2.3e-11 44.3 0.0 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF86210 - 3.9e-10 39.5 0.1 4.3e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF86210 - 0.0013 19.0 0.4 0.023 14.9 0.4 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit DUF2075 PF09848.9 ORF86210 - 0.053 12.7 0.0 0.055 12.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AFG1_ATPase PF03969.16 ORF85980 - 1.1e-19 70.6 0.3 1.2e-19 70.4 0.3 1.0 1 0 0 1 1 1 1 AFG1-like ATPase DUF3979 PF13141.6 ORF85980 - 0.04 14.2 0.1 0.043 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) NPHI_C PF08469.10 ORF85980 - 0.044 13.8 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Nucleoside triphosphatase I C-terminal CRISPR_assoc PF08798.11 ORF85980 - 0.055 13.6 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 CRISPR associated protein ISK_Channel PF02060.15 ORF85582 - 0.061 13.0 0.0 0.083 12.6 0.0 1.3 1 1 0 1 1 1 0 Slow voltage-gated potassium channel P5-ATPase PF12409.8 ORF85582 - 0.77 9.9 6.5 0.25 11.4 3.7 1.7 1 1 1 2 2 2 0 P5-type ATPase cation transporter CxC3 PF18804.1 ORF85416 - 0.02 14.7 0.9 0.02 14.7 0.9 2.2 1 1 1 2 2 2 0 CxC3 like cysteine cluster associated with KDZ transposases Se-cys_synth_N PF12390.8 ORF85237 - 0.0054 16.9 0.2 0.01 16.0 0.2 1.4 1 0 0 1 1 1 1 Selenocysteine synthase N terminal Ldl_recept_b PF00058.17 ORF85237 - 0.13 12.7 0.3 1 9.9 0.3 2.2 1 1 0 1 1 1 0 Low-density lipoprotein receptor repeat class B DUF5359 PF17313.2 ORF85186 - 0.17 11.9 1.9 0.28 11.2 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5359) Frag1 PF10277.9 ORF84825 - 0.0015 18.1 2.9 0.0017 17.9 2.9 1.0 1 0 0 1 1 1 1 Frag1/DRAM/Sfk1 family Fis1_TPR_C PF14853.6 ORF84381 - 0.044 13.9 0.1 0.06 13.4 0.1 1.3 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat Rad50_zn_hook PF04423.14 ORF82373 - 0.015 15.1 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif YecM PF06185.12 ORF8196 - 0.016 14.8 0.1 0.019 14.7 0.1 1.1 1 0 0 1 1 1 0 YecM protein PDEase_I PF00233.19 ORF81725 - 3.8e-11 43.2 0.1 4.4e-11 43.0 0.1 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Polysacc_deac_1 PF01522.21 ORF80225 - 0.035 14.0 0.3 0.046 13.6 0.3 1.2 1 0 0 1 1 1 0 Polysaccharide deacetylase DUF1664 PF07889.12 ORF80225 - 0.18 11.9 4.5 0.16 12.0 2.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 ORF80225 - 0.31 11.6 6.1 0.43 11.1 6.1 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region Med9 PF07544.13 ORF80225 - 0.33 11.1 6.2 3 8.0 0.4 2.1 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Exonuc_X-T_C PF08411.10 ORF80092 - 9.7e-26 90.5 2.0 1.1e-25 90.3 2.0 1.0 1 0 0 1 1 1 1 Exonuclease C-terminal KSHV_K8 PF07188.11 ORF7960 - 0.002 17.5 0.1 0.0022 17.4 0.1 1.1 1 0 0 1 1 1 1 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein DUF2877 PF11392.8 ORF79222 - 4.1e-17 62.9 0.0 4.5e-17 62.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2877) Ribosomal_L7Ae PF01248.26 ORF79011 - 2.8e-22 78.2 0.1 3.3e-22 78.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 ORF79011 - 0.00052 19.8 0.0 0.00082 19.2 0.0 1.4 1 1 0 1 1 1 1 PELOTA RNA binding domain RNase_P_pop3 PF08228.11 ORF79011 - 0.0026 17.8 0.0 0.0029 17.7 0.0 1.0 1 0 0 1 1 1 1 RNase P subunit Pop3 RNA_pol_Rpo13 PF12136.8 ORF79011 - 0.072 13.0 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase Rpo13 subunit HTH domain NRD1_2 PF01995.16 ORF79011 - 0.13 11.6 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 NrpR regulatory domains NRD1 and 2 ARL2_Bind_BART PF11527.8 ORF78897 - 4.3e-05 23.6 0.1 5.2e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART PCI PF01399.27 ORF78463 - 1.2 9.7 4.1 36 4.9 4.1 2.0 1 1 0 1 1 1 0 PCI domain BROMI PF14961.6 ORF78105 - 0.072 10.5 0.2 0.073 10.5 0.2 1.0 1 0 0 1 1 1 0 Broad-minded protein DUF1364 PF07102.12 ORF76780 - 8.2e-43 144.2 0.6 9.1e-43 144.0 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1364) DUF968 PF06147.11 ORF76780 - 0.14 12.4 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF968) ABC_tran PF00005.27 ORF76757 - 1.7e-06 28.6 0.0 1.8e-06 28.5 0.0 1.0 1 0 0 1 1 1 1 ABC transporter TPD PF14811.6 ORF76757 - 0.003 17.4 0.0 0.0042 17.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif SH3_12 PF18129.1 ORF76757 - 0.16 12.1 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 Xrn1 SH3-like domain Histone PF00125.24 ORF7580 - 3.3e-14 53.3 0.0 3.6e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 ORF7580 - 0.07 13.3 0.0 0.089 12.9 0.0 1.1 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold SnAC PF14619.6 ORF75151 - 0.16 12.6 1.7 0.22 12.2 1.7 1.2 1 0 0 1 1 1 0 Snf2-ATP coupling, chromatin remodelling complex Bac_export_2 PF01312.19 ORF74480 - 0.088 12.0 0.5 0.1 11.8 0.5 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family Peptidase_C12 PF01088.21 ORF74356 - 3.7e-17 62.8 0.0 4e-17 62.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 LSM PF01423.22 ORF73610 - 2.3e-21 75.3 0.2 2.6e-21 75.1 0.2 1.1 1 0 0 1 1 1 1 LSM domain UPF0565 PF10561.9 ORF73610 - 0.087 12.0 0.0 0.094 11.9 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 SM-ATX PF14438.6 ORF73610 - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Ataxin 2 SM domain DUF4598 PF15370.6 ORF73161 - 0.1 13.1 0.2 0.11 13.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4598) IL6Ra-bind PF09240.10 ORF73140 - 0.011 16.2 0.3 0.013 15.9 0.3 1.1 1 0 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding Peptidase_S24 PF00717.23 ORF72906 - 0.032 14.2 0.1 0.05 13.6 0.1 1.3 1 0 0 1 1 1 0 Peptidase S24-like ribosomal_L24 PF17136.4 ORF72904 - 0.19 12.1 0.0 0.29 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 ATG27 PF09451.10 ORF72684 - 0.0048 16.8 3.1 0.0066 16.3 3.1 1.2 1 0 0 1 1 1 1 Autophagy-related protein 27 DUF1700 PF08006.11 ORF72684 - 0.2 11.2 3.9 0.2 11.2 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) E1-E2_ATPase PF00122.20 ORF72684 - 0.25 10.9 1.3 0.29 10.6 1.3 1.0 1 0 0 1 1 1 0 E1-E2 ATPase Gemini_mov PF01708.16 ORF72684 - 8.4 6.2 6.4 1.3 8.8 1.1 2.0 2 0 0 2 2 2 0 Geminivirus putative movement protein TMEM51 PF15345.6 ORF72195 - 0.016 15.1 0.1 0.02 14.7 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 RS4NT PF08071.12 ORF72195 - 0.22 11.7 1.6 0.32 11.1 1.6 1.2 1 0 0 1 1 1 0 RS4NT (NUC023) domain PDEase_I PF00233.19 ORF72157 - 3.8e-11 43.2 0.1 4.4e-11 43.0 0.1 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase IPPT PF01715.17 ORF71941 - 2e-19 70.3 0.0 2.4e-19 70.1 0.0 1.1 1 0 0 1 1 1 1 IPP transferase D5_N PF08706.11 ORF71941 - 0.18 12.1 0.3 0.2 11.9 0.3 1.1 1 0 0 1 1 1 0 D5 N terminal like Mtc PF03820.17 ORF71303 - 0.078 12.0 0.3 0.1 11.6 0.3 1.2 1 0 0 1 1 1 0 Tricarboxylate carrier WES_acyltransf PF03007.16 ORF71264 - 0.014 15.2 0.2 0.016 15.0 0.2 1.4 1 1 0 1 1 1 0 Wax ester synthase-like Acyl-CoA acyltransferase domain Pkinase PF00069.25 ORF70979 - 0.009 15.4 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain NPP PF08384.10 ORF70979 - 0.012 15.6 1.8 0.025 14.6 0.7 1.9 2 0 0 2 2 2 0 Pro-opiomelanocortin, N-terminal region DUF2315 PF10231.9 ORF70464 - 0.013 15.5 0.2 0.014 15.5 0.2 1.1 1 0 0 1 1 1 0 Apoptogenic protein 1 DUF5643 PF18705.1 ORF69381 - 0.019 14.9 0.1 0.025 14.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5643) Cystatin PF00031.21 ORF69341 - 6.1e-10 39.2 0.0 6.8e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Cystatin domain SQAPI PF16845.5 ORF69341 - 0.047 14.0 0.8 0.073 13.4 0.8 1.4 1 1 0 1 1 1 0 Aspartic acid proteinase inhibitor RIIa PF02197.17 ORF69232 - 0.0003 20.4 0.0 0.00062 19.4 0.0 1.5 2 0 0 2 2 2 1 Regulatory subunit of type II PKA R-subunit Dpy-30 PF05186.13 ORF69232 - 0.0037 16.9 0.0 0.0051 16.5 0.0 1.3 1 0 0 1 1 1 1 Dpy-30 motif Lipase_GDSL_3 PF14606.6 ORF69232 - 0.063 13.4 0.1 0.085 13.0 0.1 1.3 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family DUF3536 PF12055.8 ORF69232 - 0.13 11.5 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3536) SHE3 PF17078.5 ORF68967 - 0.059 13.1 3.3 0.069 12.9 3.3 1.0 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 IBR PF01485.21 ORF68889 - 1.1e-14 54.3 11.4 1.7e-14 53.8 8.4 2.0 2 0 0 2 2 2 1 IBR domain, a half RING-finger domain zf-RING_4 PF14570.6 ORF68889 - 0.018 14.8 10.5 0.07 12.9 5.2 2.7 2 1 1 3 3 3 0 RING/Ubox like zinc-binding domain Srg PF02118.21 ORF68249 - 0.025 14.3 0.7 0.034 13.8 0.7 1.2 1 0 0 1 1 1 0 Srg family chemoreceptor DnaJ PF00226.31 ORF67736 - 0.002 18.2 0.2 0.0038 17.3 0.0 1.5 2 0 0 2 2 2 1 DnaJ domain GPAT_N PF14829.6 ORF67736 - 0.007 16.3 0.1 0.019 14.9 0.0 1.8 2 0 0 2 2 2 1 Glycerol-3-phosphate acyltransferase N-terminal SKA2 PF16740.5 ORF67612 - 0.05 13.4 0.2 0.062 13.1 0.2 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 DUF218 PF02698.17 ORF67019 - 0.022 14.8 0.9 0.032 14.3 0.9 1.4 1 1 0 1 1 1 0 DUF218 domain Na_Ca_ex PF01699.24 ORF6691 - 0.00046 20.2 2.3 0.00052 20.0 2.3 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein SecD_SecF PF02355.16 ORF6691 - 0.11 11.9 0.2 0.13 11.6 0.2 1.1 1 0 0 1 1 1 0 Protein export membrane protein Ca_hom_mod PF14798.6 ORF6691 - 0.14 11.2 0.0 0.18 10.9 0.0 1.2 1 0 0 1 1 1 0 Calcium homeostasis modulator VSG_B PF13206.6 ORF66845 - 0.018 14.3 0.1 0.018 14.3 0.1 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain DUF5488 PF17590.2 ORF66122 - 0.063 13.0 0.1 0.097 12.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5488) CvfB_WH PF17783.1 ORF66122 - 0.17 11.7 0.1 0.31 10.9 0.1 1.4 1 0 0 1 1 1 0 CvfB-like winged helix domain DUF836 PF05768.14 ORF65718 - 0.0077 16.6 1.3 0.01 16.2 1.3 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Trm5_N PF18093.1 ORF65045 - 0.022 14.7 0.5 0.16 11.9 0.3 2.0 2 0 0 2 2 2 0 tRNA methyltransferase 5 N-terminal domain Pox_T4_C PF04490.12 ORF64538 - 0.16 12.2 0.1 0.34 11.1 0.0 1.5 1 1 1 2 2 2 0 Poxvirus T4 protein, C terminus DUF1970 PF09301.10 ORF64447 - 0.25 11.6 1.8 0.29 11.4 1.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1970) T7SS_ESX_EspC PF10824.8 ORF64386 - 0.044 14.2 0.1 0.06 13.8 0.1 1.2 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm PFK PF00365.20 ORF64337 - 1.4e-14 54.2 0.0 1.9e-14 53.7 0.0 1.2 1 0 0 1 1 1 1 Phosphofructokinase IgaA PF07095.11 ORF64232 - 1.9e-37 128.7 0.0 2.2e-37 128.5 0.0 1.0 1 0 0 1 1 1 1 Intracellular growth attenuator protein IgaA TPR_21 PF09976.9 ORF64232 - 0.11 12.2 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain Cystatin PF00031.21 ORF63401 - 6.1e-10 39.2 0.0 6.8e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Cystatin domain SQAPI PF16845.5 ORF63401 - 0.047 14.0 0.8 0.073 13.4 0.8 1.4 1 1 0 1 1 1 0 Aspartic acid proteinase inhibitor WCOR413 PF05562.11 ORF63292 - 0.02 14.8 0.4 0.023 14.7 0.4 1.1 1 0 0 1 1 1 0 Cold acclimation protein WCOR413 Nodulin PF02451.15 ORF61884 - 0.11 12.0 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Nodulin DM4_12 PF07841.13 ORF61843 - 0.032 14.9 0.1 0.036 14.7 0.1 1.2 1 0 0 1 1 1 0 DM4/DM12 family DUF1904 PF08921.11 ORF61202 - 0.0047 17.2 0.7 0.0054 17.0 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1904) Drf_FH3 PF06367.16 ORF60700 - 0.048 13.3 2.5 0.07 12.7 2.5 1.4 1 1 0 1 1 1 0 Diaphanous FH3 Domain FeS_assembly_P PF01883.19 ORF60058 - 1.7e-07 31.3 0.0 2.5e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein TerY_C PF15616.6 ORF60058 - 0.09 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain HigB-like_toxin PF05015.13 ORF59393 - 0.098 13.1 0.1 0.14 12.6 0.1 1.2 1 0 0 1 1 1 0 RelE-like toxin of type II toxin-antitoxin system HigB SHE3 PF17078.5 ORF58326 - 0.059 13.1 3.3 0.069 12.9 3.3 1.0 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 SAM_1 PF00536.30 ORF57923 - 7.9e-06 26.2 0.0 9.9e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 ORF57923 - 8.6e-05 22.6 0.0 0.00011 22.3 0.0 1.1 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) DUF3173 PF11372.8 ORF57923 - 0.02 14.8 0.0 0.1 12.5 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3173) EspF PF04806.12 ORF57429 - 0.0027 18.1 0.9 0.0027 18.1 0.9 2.1 2 0 0 2 2 2 1 EspF protein repeat DUF983 PF06170.12 ORF57387 - 0.024 15.0 0.1 0.03 14.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF983) LIME1 PF15332.6 ORF56881 - 0.13 11.9 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 Lck-interacting transmembrane adapter 1 CENP-B_dimeris PF09026.10 ORF56658 - 0.046 14.1 0.0 0.053 13.9 0.0 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain PseudoU_synth_2 PF00849.22 ORF56207 - 6.3e-06 26.4 0.4 7.9e-06 26.0 0.4 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase Ribosomal_S28e PF01200.18 ORF56207 - 0.021 14.8 0.1 0.029 14.3 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S28e Sugar_tr PF00083.24 ORF55384 - 0.00018 20.6 0.0 0.00018 20.5 0.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter Hpt PF01627.23 ORF55346 - 3.2e-07 30.5 0.8 5.2e-07 29.8 0.8 1.4 1 1 0 1 1 1 1 Hpt domain Carbam_trans_C PF16861.5 ORF55346 - 0.087 12.4 0.1 0.12 12.0 0.1 1.3 1 1 0 1 1 1 0 Carbamoyltransferase C-terminus GHMP_kinases_C PF08544.13 ORF55346 - 0.13 12.7 0.2 1.4 9.3 0.2 2.1 1 1 0 1 1 1 0 GHMP kinases C terminal DUF5359 PF17313.2 ORF54699 - 0.17 11.9 1.9 0.28 11.2 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5359) GYR PF02756.14 ORF5466 - 1.1 9.0 5.4 3 7.6 5.4 1.8 1 0 0 1 1 1 0 GYR motif MutS_IV PF05190.18 ORF53513 - 0.017 15.4 1.0 0.021 15.2 1.0 1.1 1 0 0 1 1 1 0 MutS family domain IV OEP PF02321.18 ORF53160 - 0.17 11.7 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Outer membrane efflux protein Abhydrolase_6 PF12697.7 ORF51974 - 0.1 13.2 0.0 0.1 13.2 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family DERM PF14704.6 ORF51089 - 0.019 15.4 3.5 0.021 15.3 3.5 1.1 1 0 0 1 1 1 0 Dermatopontin Glyoxalase PF00903.25 ORF50441 - 0.00061 20.0 0.0 0.00065 19.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ThiS PF02597.20 ORF49141 - 0.5 11.0 4.9 2.9 8.6 1.3 2.3 1 1 1 2 2 2 0 ThiS family DUF724 PF05266.14 ORF49141 - 0.68 9.7 7.0 0.8 9.5 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) APG6_N PF17675.1 ORF49141 - 3.7 8.1 14.3 4.7 7.8 14.3 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region FliT PF05400.13 ORF49121 - 0.82 10.5 8.5 0.17 12.8 4.5 1.9 2 1 0 2 2 2 0 Flagellar protein FliT zf-C4H2 PF10146.9 ORF49121 - 3.5 7.9 8.7 3.6 7.8 8.7 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF2205 PF10224.9 ORF49121 - 3.6 7.6 11.1 0.35 10.9 3.8 2.1 1 1 1 2 2 2 0 Short coiled-coil protein Laminin_EGF PF00053.24 ORF48621 - 0.34 11.1 5.0 2.1 8.6 3.4 2.3 1 1 1 2 2 2 0 Laminin EGF domain Ufd2P_core PF10408.9 ORF48367 - 6.7e-23 81.2 0.4 7.3e-23 81.0 0.4 1.0 1 0 0 1 1 1 1 Ubiquitin elongating factor core Kinesin PF00225.23 ORF47240 - 3.8e-25 88.5 0.2 4.1e-25 88.4 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF47240 - 2.1e-12 47.2 0.0 2.7e-12 46.9 0.0 1.1 1 0 0 1 1 1 1 Microtubule binding AAA_7 PF12775.7 ORF47240 - 0.0027 17.2 0.0 0.0027 17.2 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 ORF47240 - 0.0056 17.1 0.0 0.0057 17.1 0.0 1.0 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF47240 - 0.0084 16.4 0.0 0.0099 16.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain DUF87 PF01935.17 ORF47240 - 0.016 15.3 0.2 0.032 14.3 0.1 1.5 1 1 0 1 1 1 0 Helicase HerA, central domain DUF2791 PF10923.8 ORF47240 - 0.023 13.6 0.1 0.024 13.5 0.1 1.1 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) AAA_30 PF13604.6 ORF47240 - 0.032 13.9 0.0 0.048 13.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF47240 - 0.045 14.2 0.0 0.053 13.9 0.0 1.3 1 0 0 1 1 1 0 RNA helicase SHE3 PF17078.5 ORF46620 - 0.072 12.8 3.0 0.084 12.6 3.0 1.0 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 Toxin_8 PF07365.12 ORF46433 - 0.13 12.4 0.2 0.22 11.7 0.2 1.3 1 0 0 1 1 1 0 Alpha conotoxin precursor RNF220 PF15926.5 ORF46193 - 0.027 14.1 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase RNF220 DUF218 PF02698.17 ORF45808 - 0.022 14.8 0.9 0.032 14.3 0.9 1.4 1 1 0 1 1 1 0 DUF218 domain Se-cys_synth_N PF12390.8 ORF45682 - 0.0054 16.9 0.2 0.01 16.0 0.2 1.4 1 0 0 1 1 1 1 Selenocysteine synthase N terminal Ldl_recept_b PF00058.17 ORF45682 - 0.13 12.7 0.3 1 9.9 0.3 2.2 1 1 0 1 1 1 0 Low-density lipoprotein receptor repeat class B AnfO_nitrog PF09582.10 ORF45513 - 0.056 12.8 0.8 0.071 12.5 0.7 1.3 1 1 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) DUF3099 PF11298.8 ORF45479 - 0.026 14.6 0.1 0.044 13.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) DUF1732 PF08340.11 ORF45376 - 0.00085 19.3 0.3 0.0011 18.9 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1732) TauE PF01925.19 ORF44971 - 0.00011 21.9 0.0 0.00013 21.7 0.0 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF4576 PF15144.6 ORF44971 - 0.031 14.2 0.3 0.055 13.3 0.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4576) DUF4188 PF13826.6 ORF44594 - 0.0071 16.7 0.1 0.0088 16.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4188) Cas_Cas1 PF01867.16 ORF44594 - 0.02 14.0 0.1 0.022 13.9 0.1 1.1 1 0 0 1 1 1 0 CRISPR associated protein Cas1 EHD_N PF16880.5 ORF44594 - 0.023 14.6 1.1 0.034 14.0 0.1 1.9 2 0 0 2 2 2 0 N-terminal EH-domain containing protein CitX PF03802.14 ORF44594 - 0.043 13.6 0.2 0.052 13.3 0.2 1.1 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Peptidase_M56 PF05569.11 ORF43551 - 0.1 11.8 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 AP3D1 PF06375.11 ORF43551 - 0.13 12.5 0.2 0.13 12.5 0.2 2.2 2 1 0 2 2 2 0 AP-3 complex subunit delta-1 Ras PF00071.22 ORF43049 - 3.9e-35 120.8 0.1 4.3e-35 120.7 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF43049 - 3.6e-26 91.7 0.1 3.9e-26 91.6 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF43049 - 1.6e-08 34.2 0.1 1.7e-08 34.1 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF43049 - 1.3e-05 25.2 0.0 1.4e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF43049 - 0.0053 16.1 0.0 0.0055 16.1 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF43049 - 0.0059 16.2 0.1 0.058 12.9 0.1 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain DAP3 PF10236.9 ORF43049 - 0.026 13.7 0.0 0.034 13.3 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_24 PF13479.6 ORF43049 - 0.028 14.1 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF43049 - 0.03 14.6 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF43049 - 0.078 12.9 0.0 0.088 12.7 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 ORF43049 - 0.1 12.4 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 ORF43049 - 0.12 11.8 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF43049 - 0.16 12.5 0.1 0.19 12.2 0.1 1.2 1 1 0 1 1 1 0 ABC transporter LSM PF01423.22 ORF4280 - 6e-09 35.5 3.0 6.5e-07 28.9 3.0 2.2 1 1 0 1 1 1 1 LSM domain NDUF_B7 PF05676.13 ORF42046 - 0.063 13.0 0.8 0.12 12.1 0.8 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Myb_DNA-binding PF00249.31 ORF42046 - 0.065 13.4 0.0 0.24 11.6 0.0 1.9 2 0 0 2 2 2 0 Myb-like DNA-binding domain ATG27 PF09451.10 ORF41885 - 0.0048 16.8 3.1 0.0066 16.3 3.1 1.2 1 0 0 1 1 1 1 Autophagy-related protein 27 DUF1700 PF08006.11 ORF41885 - 0.2 11.2 3.9 0.2 11.2 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) E1-E2_ATPase PF00122.20 ORF41885 - 0.25 10.9 1.3 0.29 10.6 1.3 1.0 1 0 0 1 1 1 0 E1-E2 ATPase Gemini_mov PF01708.16 ORF41885 - 8.4 6.2 6.4 1.3 8.8 1.1 2.0 2 0 0 2 2 2 0 Geminivirus putative movement protein Peptidase_S24 PF00717.23 ORF41434 - 0.032 14.2 0.1 0.05 13.6 0.1 1.3 1 0 0 1 1 1 0 Peptidase S24-like ribosomal_L24 PF17136.4 ORF41432 - 0.19 12.1 0.0 0.29 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 VSG_B PF13206.6 ORF41182 - 0.018 14.3 0.1 0.018 14.3 0.1 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain MORN PF02493.20 ORF41033 - 1.3e-20 72.0 14.9 1.9e-07 30.6 0.1 4.3 4 0 0 4 4 4 4 MORN repeat PelG PF16933.5 ORF4087 - 0.093 11.6 0.3 0.11 11.3 0.3 1.1 1 0 0 1 1 1 0 Putative exopolysaccharide Exporter (EPS-E) SLATT_5 PF18160.1 ORF4087 - 0.15 11.4 8.1 0.18 11.1 7.8 1.3 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Vma12 PF11712.8 ORF4087 - 0.16 12.0 1.5 0.22 11.6 1.5 1.3 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Pkinase PF00069.25 ORF40620 - 1.8e-20 73.5 0.0 1.8e-20 73.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF40620 - 2.7e-10 40.0 0.0 2.9e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF40620 - 0.0043 16.4 0.0 0.0049 16.2 0.0 1.1 1 0 0 1 1 1 1 Kinase-like DRY_EERY PF09750.9 ORF39754 - 0.017 15.4 1.6 0.017 15.4 1.6 1.1 1 0 0 1 1 1 0 Alternative splicing regulator Ribosomal_L22e PF01776.17 ORF39219 - 0.008 16.6 0.1 0.0098 16.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal L22e protein family DUF2931 PF11153.8 ORF39219 - 0.017 14.8 0.1 0.018 14.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) DUF2805 PF10985.8 ORF39031 - 0.11 12.8 0.0 0.21 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2805) Cystatin PF00031.21 ORF38372 - 6.1e-10 39.2 0.0 6.8e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Cystatin domain SQAPI PF16845.5 ORF38372 - 0.047 14.0 0.8 0.073 13.4 0.8 1.4 1 1 0 1 1 1 0 Aspartic acid proteinase inhibitor Spt4 PF06093.13 ORF38085 - 0.028 14.5 1.2 0.056 13.6 1.2 1.5 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger Stc1 PF12898.7 ORF38085 - 0.16 12.5 5.2 0.26 11.9 5.2 1.5 1 1 0 1 1 1 0 Stc1 domain FhuF PF06276.12 ORF37123 - 0.15 12.5 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Ferric iron reductase FhuF-like transporter TadZ_N PF16968.5 ORF36831 - 0.089 12.5 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Pilus assembly protein TadZ N-terminal LSM PF01423.22 ORF3652 - 2.3e-21 75.3 0.2 2.6e-21 75.1 0.2 1.1 1 0 0 1 1 1 1 LSM domain UPF0565 PF10561.9 ORF3652 - 0.087 12.0 0.0 0.094 11.9 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 SM-ATX PF14438.6 ORF3652 - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Ataxin 2 SM domain Coilin_N PF15862.5 ORF36159 - 0.08 12.8 4.2 0.08 12.7 4.2 1.0 1 0 0 1 1 1 0 Coilin N-terminus DUF465 PF04325.13 ORF36159 - 0.092 12.8 0.3 0.17 12.0 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF465) Polyketide_cyc2 PF10604.9 ORF35794 - 0.026 14.8 1.4 0.032 14.5 1.4 1.4 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport DUF2990 PF11693.8 ORF35215 - 0.25 11.5 3.0 4.3 7.6 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2990) Se-cys_synth_N PF12390.8 ORF34463 - 0.0054 16.9 0.2 0.01 16.0 0.2 1.4 1 0 0 1 1 1 1 Selenocysteine synthase N terminal Ldl_recept_b PF00058.17 ORF34463 - 0.13 12.7 0.3 1 9.9 0.3 2.2 1 1 0 1 1 1 0 Low-density lipoprotein receptor repeat class B HHH_7 PF14635.6 ORF34128 - 0.0081 16.5 0.0 5.2 7.5 0.0 2.1 1 1 1 2 2 2 2 Helix-hairpin-helix motif DUF2054 PF10218.9 ORF34128 - 0.029 14.4 3.3 0.04 14.0 3.3 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) Ribosomal_L17 PF01196.19 ORF32246 - 6.5e-23 81.4 0.0 7.2e-23 81.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L17 BEN PF10523.9 ORF32239 - 0.0034 17.6 0.2 0.0064 16.7 0.2 1.4 1 0 0 1 1 1 1 BEN domain DUF2972 PF11186.8 ORF31062 - 0.031 14.2 1.8 0.034 14.0 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2972) FPN1 PF06963.12 ORF31062 - 0.22 10.0 0.1 0.27 9.7 0.1 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) Papilloma_E5A PF05776.12 ORF30679 - 0.00093 19.5 0.7 0.0012 19.1 0.7 1.1 1 0 0 1 1 1 1 Papillomavirus E5A protein DUF4064 PF13273.6 ORF30679 - 0.028 14.7 0.0 0.035 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) MRAP PF15183.6 ORF30679 - 0.032 14.2 0.1 0.039 13.9 0.1 1.2 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family DUF4384 PF14326.6 ORF30679 - 0.053 13.6 0.0 0.077 13.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4384) Orf78 PF06024.12 ORF30679 - 0.069 13.5 0.2 0.076 13.3 0.2 1.2 1 0 0 1 1 1 0 Orf78 (ac78) PRIMA1 PF16101.5 ORF30679 - 0.15 12.1 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 IL6Ra-bind PF09240.10 ORF30590 - 0.011 16.2 0.3 0.013 15.9 0.3 1.1 1 0 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding AFG1_ATPase PF03969.16 ORF30038 - 1.1e-19 70.6 0.3 1.2e-19 70.4 0.3 1.0 1 0 0 1 1 1 1 AFG1-like ATPase DUF3979 PF13141.6 ORF30038 - 0.04 14.2 0.1 0.043 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) NPHI_C PF08469.10 ORF30038 - 0.044 13.8 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Nucleoside triphosphatase I C-terminal CRISPR_assoc PF08798.11 ORF30038 - 0.055 13.6 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 CRISPR associated protein ABC_tran PF00005.27 ORF29284 - 1.7e-06 28.6 0.0 1.8e-06 28.5 0.0 1.0 1 0 0 1 1 1 1 ABC transporter TPD PF14811.6 ORF29284 - 0.003 17.4 0.0 0.0042 17.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif SH3_12 PF18129.1 ORF29284 - 0.16 12.1 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 Xrn1 SH3-like domain YscO PF07321.12 ORF29079 - 0.02 14.8 0.2 0.021 14.8 0.2 1.1 1 0 0 1 1 1 0 Type III secretion protein YscO DHquinase_II PF01220.19 ORF29079 - 0.023 14.3 0.0 0.028 14.1 0.0 1.0 1 0 0 1 1 1 0 Dehydroquinase class II TBCC_N PF16752.5 ORF28617 - 7.4e-09 36.1 3.8 8.2e-09 35.9 3.8 1.0 1 0 0 1 1 1 1 Tubulin-specific chaperone C N-terminal domain SAS4 PF15460.6 ORF28617 - 0.043 13.9 6.0 0.06 13.4 6.0 1.2 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 2-oxogl_dehyd_N PF16078.5 ORF28617 - 0.07 12.7 1.1 0.084 12.5 0.1 1.5 2 0 0 2 2 2 0 2-oxoglutarate dehydrogenase N-terminus DUF572 PF04502.13 ORF28617 - 0.11 12.1 5.4 0.12 12.0 5.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF572) DUF4446 PF14584.6 ORF28617 - 0.11 12.4 0.9 0.13 12.2 0.4 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) NMDAR2_C PF10565.9 ORF28617 - 0.13 11.1 4.0 0.15 10.9 4.0 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus DUF4716 PF15837.5 ORF28228 - 0.24 11.5 2.5 0.71 10.0 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) DUF5402 PF17393.2 ORF28122 - 0.15 12.0 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5402) EF-hand_13 PF17958.1 ORF28111 - 0.096 12.5 0.0 0.19 11.6 0.0 1.4 1 1 0 1 1 1 0 EF-hand domain Filament PF00038.21 ORF27869 - 0.0008 19.1 0.6 0.00096 18.8 0.6 1.0 1 0 0 1 1 1 1 Intermediate filament protein BAR PF03114.18 ORF27869 - 0.006 16.3 0.1 0.006 16.3 0.1 1.1 1 0 0 1 1 1 1 BAR domain ISG65-75 PF11727.8 ORF27869 - 0.014 14.7 0.0 0.016 14.4 0.0 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein DUF4407 PF14362.6 ORF27869 - 0.019 14.3 0.2 0.021 14.2 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) phiKZ_IP PF12699.7 ORF27869 - 0.059 12.5 0.1 0.071 12.2 0.1 1.0 1 0 0 1 1 1 0 phiKZ-like phage internal head proteins FlaG PF03646.15 ORF27869 - 0.084 13.1 2.1 0.13 12.4 2.1 1.3 1 0 0 1 1 1 0 FlaG protein DUF948 PF06103.11 ORF27869 - 0.085 13.1 0.3 0.17 12.2 0.2 1.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Adhesin_P1_N PF18652.1 ORF27869 - 0.088 12.8 1.7 0.13 12.3 1.7 1.2 1 0 0 1 1 1 0 Adhesin P1 N-terminal domain Med9 PF07544.13 ORF27869 - 0.21 11.7 2.1 0.39 10.8 2.1 1.5 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 KfrA_N PF11740.8 ORF27869 - 3.3 8.4 9.4 5.1 7.8 9.2 1.3 1 1 0 1 1 1 0 Plasmid replication region DNA-binding N-term MutS_IV PF05190.18 ORF26549 - 0.017 15.4 1.0 0.021 15.2 1.0 1.1 1 0 0 1 1 1 0 MutS family domain IV SapC PF07277.11 ORF26030 - 0.017 14.7 1.6 0.019 14.6 1.6 1.0 1 0 0 1 1 1 0 SapC CheY-binding PF09078.11 ORF26030 - 0.059 13.5 0.2 0.097 12.8 0.2 1.3 1 0 0 1 1 1 0 CheY binding LMBR1 PF04791.16 ORF26030 - 0.064 12.2 2.0 0.065 12.1 2.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ehbp PF10622.9 ORF25901 - 0.023 14.7 0.7 0.033 14.2 0.6 1.3 1 1 0 1 1 1 0 Energy-converting hydrogenase B subunit P (EhbP) Mod_r PF07200.13 ORF25519 - 0.0026 17.9 0.0 0.003 17.7 0.0 1.1 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein DHHC PF01529.20 ORF25059 - 0.011 15.8 0.5 0.013 15.6 0.5 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase HlyD_D23 PF16576.5 ORF24969 - 0.077 12.2 0.0 0.089 12.0 0.0 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion EF-hand_7 PF13499.6 ORF24825 - 1.4e-08 35.1 0.3 2.1e-08 34.5 0.3 1.3 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF24825 - 7.4e-08 31.7 0.2 0.0021 17.8 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF24825 - 2.3e-06 26.7 0.0 0.0026 17.2 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF24825 - 0.0011 18.8 0.1 0.15 11.9 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF24825 - 0.022 14.6 0.3 0.94 9.4 0.0 2.2 2 0 0 2 2 2 0 EF hand XPA_C PF05181.12 ORF24385 - 0.11 12.4 0.0 0.23 11.4 0.0 1.7 1 1 0 1 1 1 0 XPA protein C-terminus CCSMST1 PF15013.6 ORF24121 - 0.11 12.7 0.8 0.21 11.8 0.8 1.6 1 1 0 1 1 1 0 CCSMST1 family DUF3810 PF12725.7 ORF24121 - 0.21 10.9 4.0 0.23 10.8 4.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DHHC PF01529.20 ORF24121 - 0.4 10.8 5.2 0.51 10.4 5.2 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase CAP PF00188.26 ORF23960 - 0.044 14.6 0.0 0.051 14.4 0.0 1.1 1 0 0 1 1 1 0 Cysteine-rich secretory protein family DUF4913 PF16259.5 ORF22839 - 0.01 15.9 4.7 0.016 15.2 4.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4913) Fis1_TPR_C PF14853.6 ORF22281 - 0.044 13.9 0.1 0.06 13.4 0.1 1.3 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat Glycolipid_bind PF06475.11 ORF22113 - 0.14 11.7 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 Putative glycolipid-binding DUF5354 PF17305.2 ORF21459 - 0.16 12.2 0.5 1 9.6 0.3 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5354) Sid-5 PF17204.3 ORF21340 - 0.071 13.3 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Sid-5 family CcdB PF01845.17 ORF21266 - 0.091 13.0 0.5 0.17 12.2 0.4 1.4 1 1 1 2 2 2 0 CcdB protein Mtc PF03820.17 ORF21166 - 0.078 12.0 0.3 0.1 11.6 0.3 1.2 1 0 0 1 1 1 0 Tricarboxylate carrier GhoS PF11080.8 ORF20443 - 2e-42 143.1 0.2 2.2e-42 143.0 0.2 1.0 1 0 0 1 1 1 1 Endoribonuclease GhoS Na_sulph_symp PF00939.19 ORF20181 - 5.9e-08 32.2 2.8 6.5e-08 32.1 2.8 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 ORF20181 - 3.9e-06 26.3 4.7 4.3e-06 26.1 4.7 1.0 1 0 0 1 1 1 1 Citrate transporter Trm5_N PF18093.1 ORF20099 - 0.022 14.7 0.5 0.16 11.9 0.3 2.0 2 0 0 2 2 2 0 tRNA methyltransferase 5 N-terminal domain Cystatin PF00031.21 ORF17781 - 6.1e-10 39.2 0.0 6.8e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Cystatin domain SQAPI PF16845.5 ORF17781 - 0.047 14.0 0.8 0.073 13.4 0.8 1.4 1 1 0 1 1 1 0 Aspartic acid proteinase inhibitor Promethin PF16015.5 ORF17768 - 0.057 13.4 11.2 0.068 13.1 11.2 1.2 1 0 0 1 1 1 0 Promethin ANAPC15 PF15243.6 ORF16562 - 0.00035 20.9 7.5 0.00042 20.6 7.5 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 15 Astro_capsid_p PF12226.8 ORF16562 - 2.4 7.2 8.4 2.5 7.2 8.4 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein CDC45 PF02724.14 ORF16562 - 2.9 6.1 8.5 3.5 5.8 8.5 1.0 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF16562 - 6.8 4.6 10.3 8.2 4.4 10.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi RRN3 PF05327.11 ORF16562 - 6.9 5.1 10.1 8 4.9 10.1 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Atg14 PF10186.9 ORF16111 - 0.0023 17.1 6.1 0.0026 16.9 6.1 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 FliD_N PF02465.18 ORF16111 - 0.0026 18.4 0.5 0.0027 18.4 0.5 1.2 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus Spc7 PF08317.11 ORF16111 - 0.012 14.6 4.0 0.011 14.6 4.0 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein ATG16 PF08614.11 ORF16111 - 0.015 15.5 6.7 0.029 14.6 6.6 1.6 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) TolA_bind_tri PF16331.5 ORF16111 - 0.028 14.5 1.0 0.047 13.8 1.0 1.4 1 0 0 1 1 1 0 TolA binding protein trimerisation Spc24 PF08286.11 ORF16111 - 0.043 14.1 4.0 0.054 13.7 4.0 1.3 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 PEARLI-4 PF05278.12 ORF16111 - 0.046 13.3 4.2 0.054 13.1 4.2 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) DHHC PF01529.20 ORF15958 - 0.011 15.8 0.5 0.013 15.6 0.5 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase PsbK PF02533.15 ORF15876 - 1.1e-20 73.5 6.5 2.3e-20 72.4 6.5 1.5 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component DUF4148 PF13663.6 ORF15876 - 2.8 8.2 6.5 6.1 7.1 6.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4148) DUF4764 PF15961.5 ORF15702 - 2.5 6.7 4.8 3 6.4 4.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4764) DUF5592 PF17332.2 ORF15437 - 0.068 13.7 1.1 0.072 13.7 0.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5592) Bradykinin PF06753.12 ORF14723 - 6 6.7 6.6 0.68 9.7 0.8 2.2 2 0 0 2 2 2 0 Bradykinin Rav1p_C PF12234.8 ORF14448 - 0.0026 16.2 0.2 0.0029 16.1 0.2 1.0 1 0 0 1 1 1 1 RAVE protein 1 C terminal AFG1_ATPase PF03969.16 ORF14190 - 1.1e-19 70.6 0.3 1.2e-19 70.4 0.3 1.0 1 0 0 1 1 1 1 AFG1-like ATPase DUF3979 PF13141.6 ORF14190 - 0.04 14.2 0.1 0.043 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) NPHI_C PF08469.10 ORF14190 - 0.044 13.8 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Nucleoside triphosphatase I C-terminal CRISPR_assoc PF08798.11 ORF14190 - 0.055 13.6 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 CRISPR associated protein PsbK PF02533.15 ORF13884 - 2.3e-20 72.4 6.5 2.3e-20 72.4 6.5 1.6 2 0 0 2 2 2 1 Photosystem II 4 kDa reaction centre component DUF167 PF02594.16 ORF13826 - 4.7e-25 87.5 0.2 5.5e-25 87.3 0.2 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 XhlA PF10779.9 ORF13654 - 0.0085 16.3 1.9 0.0085 16.3 1.9 1.8 1 1 1 2 2 2 1 Haemolysin XhlA HALZ PF02183.18 ORF13654 - 0.026 14.7 2.3 0.026 14.7 2.3 3.4 2 2 1 3 3 3 0 Homeobox associated leucine zipper FlxA PF14282.6 ORF13654 - 0.029 14.3 4.3 0.029 14.3 4.3 2.0 2 0 0 2 2 2 0 FlxA-like protein YabA PF06156.13 ORF13654 - 0.034 14.8 2.2 0.034 14.8 2.2 2.1 1 1 1 2 2 2 0 Initiation control protein YabA GIT_CC PF16559.5 ORF13654 - 0.046 13.6 8.3 0.15 11.9 8.3 1.9 1 1 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor CtIP_N PF10482.9 ORF13654 - 0.055 13.5 10.8 0.067 13.2 10.8 1.1 1 0 0 1 1 1 0 Tumour-suppressor protein CtIP N-terminal domain DUF3450 PF11932.8 ORF13654 - 0.098 11.9 10.2 0.021 14.1 6.8 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) TSNAXIP1_N PF15739.5 ORF13654 - 0.18 12.2 14.4 0.2 12.1 10.6 2.0 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus APG6_N PF17675.1 ORF13654 - 0.18 12.3 18.0 0.29 11.6 18.0 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region CENP-F_leu_zip PF10473.9 ORF13654 - 0.19 11.7 18.8 0.97 9.5 18.9 1.9 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlaC_arch PF05377.11 ORF13654 - 0.3 11.5 7.5 0.37 11.2 2.6 2.8 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) LPP PF04728.13 ORF13654 - 0.61 10.5 7.1 0.93 9.9 4.5 2.6 1 1 0 2 2 2 0 Lipoprotein leucine-zipper Fib_alpha PF08702.10 ORF13654 - 1.7 8.8 9.1 2 8.6 8.7 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2205 PF10224.9 ORF13654 - 2.1 8.4 12.0 18 5.4 12.0 2.3 1 1 0 1 1 1 0 Short coiled-coil protein OmpH PF03938.14 ORF13654 - 2.5 8.4 14.6 3.6 7.9 14.6 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Snapin_Pallidin PF14712.6 ORF13654 - 5.2 7.6 14.5 0.86 10.1 5.3 2.2 1 1 1 2 2 2 0 Snapin/Pallidin DUF883 PF05957.13 ORF13654 - 6.7 7.4 8.7 30 5.3 0.5 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF4407 PF14362.6 ORF13654 - 7.5 5.8 9.2 13 5.0 9.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) V_ATPase_I PF01496.19 ORF13654 - 8.7 4.1 8.9 9.7 4.0 8.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HSP70 PF00012.20 ORF13654 - 9.2 4.3 12.1 10 4.2 12.1 1.0 1 0 0 1 1 1 0 Hsp70 protein HEAT_2 PF13646.6 ORF13636 - 0.00016 22.0 0.9 0.00021 21.6 0.9 1.1 1 0 0 1 1 1 1 HEAT repeats GlutR_dimer PF00745.20 ORF13636 - 0.0094 16.4 0.6 3.5 8.1 0.0 2.1 1 1 1 2 2 2 2 Glutamyl-tRNAGlu reductase, dimerisation domain HEAT PF02985.22 ORF13636 - 0.011 15.9 2.1 0.022 15.0 0.4 2.3 2 0 0 2 2 2 0 HEAT repeat API5 PF05918.11 ORF13636 - 0.019 13.8 1.2 0.021 13.7 1.2 1.0 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) RasGEF_N_2 PF14663.6 ORF13636 - 0.12 12.8 1.5 0.18 12.2 1.5 1.4 1 1 0 1 1 1 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Malate_DH PF12434.8 ORF13636 - 0.24 11.4 2.4 0.93 9.6 1.3 2.1 2 0 0 2 2 2 0 Malate dehydrogenase enzyme RCC1_2 PF13540.6 ORF13600 - 0.0004 20.1 0.0 0.11 12.4 0.2 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat HTH_37 PF13744.6 ORF13466 - 0.052 13.5 1.7 0.07 13.1 1.7 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain TonB_dep_Rec PF00593.24 ORF12922 - 1.1e-14 55.2 7.4 1.2e-14 55.0 7.4 1.0 1 0 0 1 1 1 1 TonB dependent receptor Frag1 PF10277.9 ORF12292 - 0.0015 18.1 2.9 0.0017 17.9 2.9 1.0 1 0 0 1 1 1 1 Frag1/DRAM/Sfk1 family DUF5349 PF17298.2 ORF12187 - 0.0084 15.9 1.4 0.01 15.6 1.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5349) DUF4405 PF14358.6 ORF12120 - 0.096 13.2 0.8 2.3 8.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) Cytochrom_B_C PF00032.17 ORF11916 - 1.1e-12 48.1 0.7 1.2e-12 48.0 0.7 1.0 1 0 0 1 1 1 1 Cytochrome b(C-terminal)/b6/petD Stn1 PF10451.9 ORF11819 - 0.19 10.7 0.0 0.24 10.3 0.0 1.1 1 0 0 1 1 1 0 Telomere regulation protein Stn1 GerE PF00196.19 ORF11203 - 0.0061 16.1 0.0 0.0098 15.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family DUF3522 PF12036.8 ORF111470 - 0.027 14.8 0.0 0.031 14.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3522) PspB PF06667.12 ORF111470 - 0.034 14.2 0.1 0.05 13.7 0.1 1.3 1 0 0 1 1 1 0 Phage shock protein B TRAP-gamma PF07074.12 ORF111470 - 0.5 9.9 2.8 4.9 6.7 0.6 2.0 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DUF5359 PF17313.2 ORF111343 - 0.17 11.9 1.9 0.28 11.2 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5359) p450 PF00067.22 ORF110940 - 3.7e-16 58.9 0.1 3.9e-16 58.9 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 Aida_N PF08910.10 ORF110856 - 0.83 10.1 3.3 1.2 9.6 3.3 1.3 1 0 0 1 1 1 0 Aida N-terminus T2SSM PF04612.12 ORF110696 - 1.1e-11 45.1 0.0 1.1e-11 45.0 0.0 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein M Archease PF01951.16 ORF110680 - 3.9e-14 53.1 0.0 5.3e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) Metallophos PF00149.28 ORF110633 - 5.2e-08 33.6 2.1 5.9e-08 33.5 2.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF2935 PF11155.8 ORF110419 - 0.0027 18.0 0.3 0.003 17.9 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2935) DUF3238 PF11579.8 ORF110419 - 0.012 15.4 0.1 0.013 15.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3238) DUF1216 PF06746.11 ORF110419 - 0.037 14.0 0.2 0.04 13.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1216) NAAA-beta PF15508.6 ORF110419 - 0.088 13.1 0.2 0.63 10.4 0.2 2.0 1 1 1 2 2 2 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase DUF2237 PF09996.9 ORF110361 - 0.0015 18.5 0.5 0.002 18.1 0.4 1.5 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2237) NPM1-C PF16276.5 ORF109434 - 0.0059 16.6 0.1 0.022 14.7 0.0 1.9 2 0 0 2 2 2 1 Nucleophosmin C-terminal domain Fis1_TPR_C PF14853.6 ORF10927 - 0.044 13.9 0.1 0.06 13.4 0.1 1.3 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat LRAT PF04970.13 ORF109117 - 0.03 14.6 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 ORF109117 - 0.038 13.8 0.1 0.054 13.3 0.1 1.3 1 1 0 1 1 1 0 PPPDE putative peptidase domain DUF4598 PF15370.6 ORF10887 - 0.1 13.1 0.2 0.11 13.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4598) Fis1_TPR_C PF14853.6 ORF108696 - 0.044 13.9 0.1 0.06 13.4 0.1 1.3 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat ACT PF01842.25 ORF108226 - 4.5e-10 39.1 0.0 5.9e-10 38.8 0.0 1.2 1 0 0 1 1 1 1 ACT domain ACT_5 PF13710.6 ORF108226 - 8.7e-10 38.3 0.1 1.8e-09 37.3 0.1 1.5 1 1 1 2 2 2 1 ACT domain ACT_4 PF13291.6 ORF108226 - 5.4e-05 23.7 0.1 7.4e-05 23.3 0.1 1.2 1 0 0 1 1 1 1 ACT domain DUF4441 PF14536.6 ORF107642 - 0.0046 17.1 0.2 0.0056 16.9 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4441) Sad1_UNC PF07738.13 ORF107223 - 0.048 13.7 0.2 0.059 13.4 0.2 1.2 1 0 0 1 1 1 0 Sad1 / UNC-like C-terminal AKAP95 PF04988.12 ORF107216 - 0.045 14.0 0.4 0.054 13.7 0.4 1.2 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) zf-RanBP PF00641.18 ORF107216 - 1.2 8.5 8.2 0.14 11.5 2.1 2.6 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others Pea-VEAacid PF08111.11 ORF106560 - 0.15 12.4 0.4 0.32 11.4 0.4 1.5 1 0 0 1 1 1 0 Pea-VEAacid family TraL PF07178.11 ORF104857 - 0.044 14.3 1.0 0.055 13.9 1.0 1.1 1 0 0 1 1 1 0 TraL protein Glyco_transf_92 PF01697.27 ORF10484 - 0.21 11.2 0.0 0.24 11.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 92 Fer2_4 PF13510.6 ORF104634 - 0.11 12.6 0.0 0.36 10.9 0.0 1.8 3 0 0 3 3 3 0 2Fe-2S iron-sulfur cluster binding domain TRPM_tetra PF16519.5 ORF103837 - 0.015 15.4 0.1 0.027 14.6 0.1 1.4 1 0 0 1 1 1 0 Tetramerisation domain of TRPM Lactate_perm PF02652.14 ORF103837 - 0.036 12.8 0.0 0.038 12.8 0.0 1.0 1 0 0 1 1 1 0 L-lactate permease CSM2 PF16834.5 ORF103039 - 0.0019 17.9 7.8 0.0021 17.7 7.8 1.0 1 0 0 1 1 1 1 Shu complex component Csm2, DNA-binding Med19 PF10278.9 ORF103039 - 0.11 12.5 13.1 0.12 12.2 13.1 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF4770 PF15994.5 ORF103039 - 0.5 10.6 9.8 0.56 10.4 9.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) Spore_III_AF PF09581.10 ORF102632 - 0.071 13.1 1.8 0.085 12.9 1.8 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) TetR_C_19 PF17924.1 ORF102092 - 0.0063 17.1 0.3 0.0079 16.8 0.3 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain ABC2_membrane_3 PF12698.7 ORF10158 - 0.52 9.4 1.7 0.5 9.4 1.7 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein HTH_9 PF08221.11 ORF100834 - 0.017 15.2 0.1 0.028 14.5 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain PCNA_C PF02747.15 ORF100614 - 0.022 14.9 0.0 0.034 14.3 0.0 1.3 1 0 0 1 1 1 0 Proliferating cell nuclear antigen, C-terminal domain Antimicrobial12 PF08107.11 ORF100450 - 0.08 12.7 0.2 0.14 12.0 0.2 1.3 1 0 0 1 1 1 0 Pleurocidin family Docking PF08990.11 ORF100450 - 0.17 11.5 0.3 0.25 11.0 0.3 1.2 1 0 0 1 1 1 0 Erythronolide synthase docking Glycolipid_bind PF06475.11 NODE_58992_length_283_cov_0.967742_g51053_i0reverse_frame_1 - 0.026 14.0 0.0 0.028 13.9 0.0 1.2 1 0 0 1 1 1 0 Putative glycolipid-binding Longin PF13774.6 NODE_58991_length_283_cov_1.028226_g51052_i0reverse_frame_1 - 0.012 15.6 0.4 0.016 15.2 0.4 1.2 1 0 0 1 1 1 0 Regulated-SNARE-like domain SecM PF06558.12 NODE_58990_length_283_cov_1.044355_g51051_i0reverse_frame_1 - 0.13 12.3 0.5 0.15 12.2 0.5 1.2 1 0 0 1 1 1 0 Secretion monitor precursor protein (SecM) CMV_US PF08001.11 NODE_58987_length_283_cov_1.245968_g51048_i0reverse_frame_1 - 0.71 9.1 5.1 0.49 9.6 3.6 1.4 1 1 0 1 1 1 0 CMV US Dict-STAT-coil PF09267.10 NODE_58979_length_283_cov_1.391129_g51040_i0forward_frame_1 - 0.044 14.2 1.7 0.067 13.6 1.7 1.4 1 1 0 1 1 1 0 Dictyostelium STAT, coiled coil Elong_Iki1 PF10483.9 NODE_58979_length_283_cov_1.391129_g51040_i0forward_frame_1 - 0.13 11.7 0.7 0.16 11.4 0.7 1.0 1 0 0 1 1 1 0 Elongator subunit Iki1 Voltage_CLC PF00654.20 NODE_58974_length_283_cov_1.491935_g51035_i0forward_frame_1 - 1.4e-24 87.1 2.0 1.4e-24 87.0 2.0 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel Rab3-GTPase_cat PF13890.6 NODE_58965_length_283_cov_1.612903_g51026_i0forward_frame_1 - 0.096 12.3 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Rab3 GTPase-activating protein catalytic subunit DUF5540 PF17694.1 NODE_58962_length_283_cov_1.758065_g51023_i0reverse_frame_1 - 0.0058 17.1 2.4 0.0072 16.8 2.4 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5540) Toxin_10 PF05431.11 NODE_58955_length_283_cov_1.854839_g51016_i0forward_frame_1 - 0.053 13.0 0.0 0.068 12.6 0.0 1.1 1 0 0 1 1 1 0 Insecticidal Crystal Toxin, P42 DUF4943 PF16301.5 NODE_58936_length_283_cov_2.274194_g50997_i0forward_frame_1 - 0.13 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4943) Exo84_C PF16528.5 NODE_58934_length_283_cov_2.330645_g50995_i0forward_frame_1 - 0.094 12.5 1.0 0.1 12.4 1.0 1.0 1 0 0 1 1 1 0 Exocyst component 84 C-terminal Selenoprotein_S PF06936.11 NODE_58930_length_283_cov_2.491935_g50991_i0forward_frame_1 - 0.24 11.2 0.5 0.3 10.9 0.5 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) Flavin_Reduct PF01613.18 NODE_58929_length_283_cov_2.516129_g50990_i0reverse_frame_1 - 0.0039 17.3 0.0 0.0078 16.3 0.0 1.5 2 0 0 2 2 2 1 Flavin reductase like domain Thioredoxin_7 PF13899.6 NODE_58923_length_283_cov_2.717742_g50984_i0reverse_frame_1 - 0.15 12.2 0.1 0.21 11.8 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like GrpE PF01025.19 NODE_58918_length_283_cov_2.979839_g50979_i0reverse_frame_1 - 3.2e-26 92.0 0.3 3.4e-26 91.9 0.3 1.0 1 0 0 1 1 1 1 GrpE Usher PF00577.20 NODE_58917_length_283_cov_2.979839_g50978_i0forward_frame_1 - 2.9e-26 92.4 3.5 3.2e-26 92.3 3.5 1.0 1 0 0 1 1 1 1 Outer membrane usher protein vMSA PF00695.19 NODE_58912_length_283_cov_3.330645_g50973_i0reverse_frame_1 - 0.18 10.9 8.7 0.21 10.6 8.7 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF3810 PF12725.7 NODE_58912_length_283_cov_3.330645_g50973_i0reverse_frame_1 - 1.6 8.0 5.7 1.6 8.0 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Bunya_NS-S PF01104.17 NODE_58909_length_283_cov_3.572581_g50970_i0reverse_frame_1 - 0.043 13.6 0.3 0.068 13.0 0.3 1.3 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-s Pkinase PF00069.25 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 1.9e-27 96.3 0.0 2.1e-27 96.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 5e-14 52.2 0.0 5.2e-14 52.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Seadorna_VP7 PF07387.11 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.0017 17.4 0.0 0.002 17.3 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pkinase_fungal PF17667.1 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.002 17.0 0.0 0.0021 16.9 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.0038 16.6 0.0 0.0046 16.3 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.0088 15.0 0.0 0.0097 14.9 0.0 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Pox_ser-thr_kin PF05445.11 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.051 12.6 0.0 0.056 12.4 0.0 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase DUF5449 PF17528.2 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.058 13.2 0.0 0.058 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5449) APH PF01636.23 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.074 13.0 0.1 0.089 12.7 0.1 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Serinc PF03348.15 NODE_58901_length_283_cov_5.955645_g50962_i0reverse_frame_1 - 0.54 9.1 8.5 0.62 8.9 8.5 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) Ribosomal_L18_c PF14204.6 NODE_58901_length_283_cov_5.955645_g50962_i0forward_frame_1 - 0.015 16.2 7.5 0.022 15.7 7.5 1.1 1 0 0 1 1 1 0 Ribosomal L18 C-terminal region DUF4783 PF16022.5 NODE_58901_length_283_cov_5.955645_g50962_i0forward_frame_1 - 0.027 14.6 3.4 0.033 14.3 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4783) Protocadherin PF08374.11 NODE_58901_length_283_cov_5.955645_g50962_i0forward_frame_1 - 0.096 12.6 1.7 0.099 12.6 1.7 1.1 1 0 0 1 1 1 0 Protocadherin zf-C2H2_11 PF16622.5 NODE_58890_length_283_cov_51.891129_g50951_i0reverse_frame_1 - 0.37 10.6 3.3 0.71 9.7 3.3 1.4 1 0 0 1 1 1 0 zinc-finger C2H2-type NapE PF06796.11 NODE_58885_length_283_cov_56.939516_g50946_i0forward_frame_1 - 0.56 9.8 2.8 2.2 7.9 0.0 2.5 3 0 0 3 3 3 0 Periplasmic nitrate reductase protein NapE DUF2285 PF10074.9 NODE_58881_length_283_cov_62.403226_g50942_i0reverse_frame_1 - 0.041 14.5 0.4 0.049 14.3 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) DotU PF09850.9 NODE_58881_length_283_cov_62.403226_g50942_i0reverse_frame_1 - 0.044 13.5 0.2 0.053 13.2 0.2 1.1 1 0 0 1 1 1 0 Type VI secretion system protein DotU UPF0242 PF06785.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.00032 20.9 16.7 0.00035 20.8 16.7 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus SlyX PF04102.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.00061 20.4 10.6 0.00083 19.9 10.6 1.3 1 0 0 1 1 1 1 SlyX OmpH PF03938.14 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.00074 19.9 20.8 0.00099 19.5 20.8 1.1 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) DUF1664 PF07889.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.00085 19.4 5.6 0.001 19.1 5.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0017 18.4 17.6 0.0025 17.9 17.6 1.3 1 0 0 1 1 1 1 Centrosome localisation domain of PPC89 CENP-F_leu_zip PF10473.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0018 18.3 20.1 0.0019 18.2 20.1 1.0 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HMMR_N PF15905.5 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0025 17.3 16.5 0.003 17.1 16.5 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal APG6_N PF17675.1 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0028 18.2 21.9 0.0042 17.6 21.9 1.3 1 0 0 1 1 1 1 Apg6 coiled-coil region Atg14 PF10186.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0036 16.4 16.6 0.004 16.3 16.6 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0045 15.9 17.7 0.0051 15.7 17.7 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein ATG16 PF08614.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0046 17.2 20.8 0.0058 16.9 20.4 1.4 1 1 0 1 1 1 1 Autophagy protein 16 (ATG16) FlaC_arch PF05377.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.011 16.1 10.2 0.05 14.0 6.4 2.2 1 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Rootletin PF15035.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.013 15.5 14.1 0.016 15.3 14.1 1.0 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion TolA_bind_tri PF16331.5 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.022 14.8 10.9 0.16 12.1 10.9 2.0 1 1 0 1 1 1 0 TolA binding protein trimerisation DUF4140 PF13600.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.025 15.0 6.5 0.025 15.0 6.5 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) CENP-Q PF13094.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.025 14.8 19.4 0.032 14.4 19.4 1.1 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Golgin_A5 PF09787.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.027 14.0 11.2 0.035 13.6 11.2 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF3450 PF11932.8 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.031 13.6 15.4 0.037 13.3 15.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) YabA PF06156.13 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.044 14.4 10.7 0.058 14.0 10.7 1.3 1 0 0 1 1 1 0 Initiation control protein YabA Macoilin PF09726.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.059 11.9 14.6 0.07 11.7 14.6 1.0 1 0 0 1 1 1 0 Macoilin family ZapB PF06005.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.084 13.3 25.2 0.15 12.5 24.8 1.7 1 1 0 1 1 1 0 Cell division protein ZapB DUF724 PF05266.14 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.1 12.4 14.2 0.14 12.0 14.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) HemX PF04375.14 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.12 11.6 13.5 0.14 11.4 13.5 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Ran-binding PF05508.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.2 10.6 6.6 0.21 10.5 6.6 1.0 1 0 0 1 1 1 0 RanGTP-binding protein Prefoldin_2 PF01920.20 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.21 11.5 21.7 0.083 12.8 14.4 2.2 1 1 1 2 2 2 0 Prefoldin subunit DUF2344 PF10105.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.24 11.2 5.4 0.28 11.0 5.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) COG6 PF06419.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.25 9.5 8.2 0.3 9.2 8.2 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 DUF1690 PF07956.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.31 11.5 16.7 0.37 11.2 16.7 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) HAUS6_N PF14661.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.35 10.4 11.3 0.41 10.2 11.3 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Fib_alpha PF08702.10 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.42 10.8 8.1 0.97 9.6 8.1 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family FUSC PF04632.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.46 9.0 5.5 0.52 8.8 5.5 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Mto2_bdg PF12808.7 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.49 10.7 17.5 0.49 10.7 15.5 2.0 1 1 1 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region Phage_GPO PF05929.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.64 9.6 14.2 1.1 8.8 14.2 1.4 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase NPV_P10 PF05531.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.64 10.5 4.7 1.7 9.1 3.8 1.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein ADIP PF11559.8 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.67 10.0 18.4 0.84 9.7 18.4 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding FliD_N PF02465.18 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.68 10.7 9.1 2.9 8.7 9.1 2.0 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus Nup88 PF10168.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.68 7.7 10.4 0.71 7.6 10.4 1.0 1 0 0 1 1 1 0 Nuclear pore component AAA_13 PF13166.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.68 8.5 14.4 0.76 8.3 14.4 1.1 1 0 0 1 1 1 0 AAA domain DUF812 PF05667.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.69 8.7 17.7 0.76 8.6 17.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) HrpB7 PF09486.10 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.81 10.1 20.5 2.4 8.5 6.9 2.0 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) Fmp27_WPPW PF10359.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.83 8.4 12.0 0.89 8.3 12.0 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Prefoldin PF02996.17 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.94 9.4 14.3 0.92 9.4 3.1 2.1 1 1 1 2 2 2 0 Prefoldin subunit FapA PF03961.13 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.3 7.6 12.2 1.6 7.3 12.2 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Exonuc_VII_L PF02601.15 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.3 8.5 9.0 1.7 8.2 9.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit V_ATPase_I PF01496.19 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.3 6.9 10.5 1.3 6.8 10.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_MT_bd PF06657.13 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.3 9.5 16.3 5.3 7.6 16.3 2.0 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 Seryl_tRNA_N PF02403.22 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.8 8.8 20.8 2.3 8.5 20.8 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Csm1_N PF18504.1 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.9 8.9 21.9 4.8 7.6 19.2 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain DivIC PF04977.15 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.2 8.1 20.6 0.17 11.7 12.5 2.4 1 1 1 2 2 2 0 Septum formation initiator Prominin PF05478.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.4 6.0 5.7 2.5 5.9 5.7 1.0 1 0 0 1 1 1 0 Prominin VPS38 PF17649.1 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.6 6.9 10.4 3.1 6.6 10.4 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting 38 MT PF12777.7 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.9 6.8 11.4 1.4 7.8 6.9 1.7 1 1 1 2 2 2 0 Microtubule-binding stalk of dynein motor DUF16 PF01519.16 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.9 8.4 14.0 0.71 10.4 10.3 1.8 1 1 1 2 2 2 0 Protein of unknown function DUF16 TMPIT PF07851.13 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 3.3 6.9 12.1 4 6.6 12.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein Spc24 PF08286.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 3.6 7.9 18.3 9.3 6.5 12.0 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF4407 PF14362.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 4.4 6.6 15.1 3.8 6.8 13.9 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4446 PF14584.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 5.1 7.1 10.8 16 5.5 9.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Sas6_CC PF18594.1 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 5.3 6.9 19.4 0.22 11.4 1.0 3.3 3 0 0 3 3 3 0 Sas6/XLF/XRCC4 coiled-coil domain BST2 PF16716.5 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 5.5 7.7 19.4 7.1 7.3 8.8 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 HSP70 PF00012.20 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 6.1 4.9 13.4 6.8 4.7 13.4 1.0 1 0 0 1 1 1 0 Hsp70 protein FemAB PF02388.16 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 8 5.2 12.9 9.4 5.0 12.9 1.1 1 0 0 1 1 1 0 FemAB family DUF641 PF04859.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 8.6 6.7 16.1 32 4.9 16.1 1.8 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) EMP24_GP25L PF01105.24 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 8.8 6.2 7.4 4.4 7.2 5.5 1.5 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD CENP-H PF05837.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 9.6 6.7 20.1 28 5.2 16.8 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) PDU_like PF15953.5 NODE_58879_length_283_cov_71.592742_g50940_i0forward_frame_1 - 0.093 12.8 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative propanediol utilisation RGI_lyase PF18370.1 NODE_58867_length_283_cov_103.540323_g50928_i0reverse_frame_1 - 0.066 13.5 0.1 0.1 12.9 0.1 1.3 1 0 0 1 1 1 0 Rhamnogalacturonan I lyases beta-sheet domain MORN PF02493.20 NODE_58866_length_283_cov_103.633065_g50927_i0forward_frame_1 - 1.3e-09 37.4 16.9 5.8e-07 29.0 0.4 4.0 4 0 0 4 4 4 2 MORN repeat MORN_2 PF07661.13 NODE_58866_length_283_cov_103.633065_g50927_i0forward_frame_1 - 1.1 9.8 0.2 1.1 9.8 0.2 3.3 3 0 0 3 3 3 0 MORN repeat variant GBP PF02263.19 NODE_58863_length_283_cov_125.951613_g50924_i0reverse_frame_1 - 0.0082 15.4 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain FUSC PF04632.12 NODE_58853_length_284_cov_0.831325_g50914_i0reverse_frame_1 - 0.37 9.3 5.3 0.42 9.1 5.3 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family betaPIX_CC PF16523.5 NODE_58853_length_284_cov_0.831325_g50914_i0reverse_frame_1 - 2.5 8.0 7.6 8.4 6.3 0.8 2.6 1 1 2 3 3 3 0 betaPIX coiled coil Phage_CRI PF05144.14 NODE_58845_length_284_cov_1.313253_g50906_i0forward_frame_1 - 0.1 11.9 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Phage replication protein CRI DUF3339 PF11820.8 NODE_58844_length_284_cov_1.329317_g50905_i0forward_frame_1 - 0.21 11.8 4.8 0.31 11.3 4.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3339) FtsH_ext PF06480.15 NODE_58844_length_284_cov_1.329317_g50905_i0forward_frame_1 - 1.5 9.2 6.6 0.4 11.0 3.6 1.5 2 0 0 2 2 2 0 FtsH Extracellular TFIIA_gamma_N PF02268.16 NODE_58843_length_284_cov_1.373494_g50904_i0reverse_frame_1 - 1.6e-05 24.8 0.1 2.1e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit, helical domain zf-B_box PF00643.24 NODE_58838_length_284_cov_1.405622_g50899_i0reverse_frame_1 - 8 6.7 8.0 0.61 10.3 2.5 1.9 2 0 0 2 2 2 0 B-box zinc finger YebG PF07130.12 NODE_58829_length_284_cov_1.562249_g50890_i0reverse_frame_1 - 5.8e-34 115.8 1.6 6.6e-34 115.6 1.6 1.0 1 0 0 1 1 1 1 YebG protein TDH PF03347.13 NODE_58827_length_284_cov_1.606426_g50888_i0forward_frame_1 - 0.025 14.1 0.2 0.031 13.9 0.2 1.1 1 0 0 1 1 1 0 Vibrio thermostable direct hemolysin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks249.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks249.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks249.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks249.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- eIF-3_zeta PF05091.12 ORF52219 - 4 6.3 9.1 5.6 5.8 9.1 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) TMEM43 PF07787.12 ORF49775 - 4.3e-33 114.8 0.0 3.1e-32 111.9 0.0 2.0 1 1 0 1 1 1 1 Transmembrane protein 43 DUF2107 PF09880.9 ORF49775 - 0.018 15.1 0.3 0.033 14.3 0.3 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2107) UCH PF00443.29 ORF4480 - 2.9e-23 82.7 0.5 4.3e-23 82.1 0.5 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF4480 - 4.7e-07 29.7 6.8 3.6e-06 26.8 6.8 1.9 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Nudix_N_2 PF14803.6 ORF4480 - 0.83 9.6 0.1 0.83 9.6 0.1 2.8 3 0 0 3 3 3 0 Nudix N-terminal zf-CHY PF05495.12 ORF4480 - 9.5 6.8 8.9 1.7 9.2 2.4 2.3 2 0 0 2 2 2 0 CHY zinc finger Peptidase_C1 PF00112.23 ORF36096 - 2.4e-17 63.7 0.0 7.4e-17 62.2 0.0 1.7 1 1 0 1 1 1 1 Papain family cysteine protease EF-hand_7 PF13499.6 ORF36096 - 5.4e-10 39.6 0.1 1.1e-09 38.6 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF36096 - 1.9e-09 36.4 0.4 0.00091 18.6 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF36096 - 1.1e-08 34.3 1.3 0.00048 19.8 0.2 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF36096 - 3.8e-06 26.6 0.8 0.015 15.1 0.1 2.5 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF36096 - 0.00092 18.6 0.6 1 9.0 0.0 2.5 2 0 0 2 2 2 2 EF hand Peptidase_C39_2 PF13529.6 ORF36096 - 0.0018 18.8 0.0 0.0073 16.9 0.0 2.0 2 0 0 2 2 2 1 Peptidase_C39 like family Peptidase_C1_2 PF03051.15 ORF36096 - 0.0092 14.8 0.2 0.23 10.2 0.1 2.1 2 0 0 2 2 2 1 Peptidase C1-like family EF-hand_4 PF12763.7 ORF36096 - 0.04 13.9 0.0 0.39 10.7 0.0 2.2 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Tfb4 PF03850.14 ORF36096 - 0.073 12.6 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Transcription factor Tfb4 EF-hand_9 PF14658.6 ORF36096 - 0.11 12.8 0.0 0.48 10.8 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain Aa_trans PF01490.18 ORF33268 - 5.3e-25 88.0 19.8 8.6e-25 87.3 19.8 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein ETRAMP PF09716.10 ORF33268 - 0.012 15.6 0.2 0.062 13.4 0.0 2.3 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) PAP_assoc PF03828.19 ORF30847 - 0.0079 16.4 0.0 7.8 6.8 0.0 2.8 2 0 0 2 2 2 2 Cid1 family poly A polymerase Aa_trans PF01490.18 ORF29416 - 5.3e-25 88.0 19.8 8.6e-25 87.3 19.8 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein ETRAMP PF09716.10 ORF29416 - 0.012 15.6 0.2 0.062 13.4 0.0 2.3 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) DNA_ligase_A_C PF04679.15 ORF29331 - 8e-15 55.2 0.1 2.4e-14 53.7 0.0 1.8 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region DNA_ligase_IV PF11411.8 ORF29331 - 2.2e-05 24.5 0.0 5.1e-05 23.3 0.0 1.7 1 0 0 1 1 1 1 DNA ligase IV BRCT_2 PF16589.5 ORF29331 - 4.6e-05 23.7 0.0 8.2e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain DNA_ligase_A_M PF01068.21 ORF29331 - 0.0043 16.7 0.2 0.0067 16.1 0.2 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain LBP_BPI_CETP PF01273.25 ORF1650 - 1.5e-05 24.7 0.1 3.5e-05 23.5 0.0 1.7 2 0 0 2 2 2 1 LBP / BPI / CETP family, N-terminal domain LBP_BPI_CETP_C PF02886.17 ORF1650 - 0.00029 20.4 0.6 0.0014 18.1 0.0 2.4 3 1 1 4 4 4 1 LBP / BPI / CETP family, C-terminal domain GntP_permease PF02447.16 ORF14811 - 3.2e-164 546.8 39.3 3.5e-164 546.7 39.3 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 ORF14811 - 1e-16 61.0 34.3 1.8e-16 60.3 34.3 1.4 1 0 0 1 1 1 1 Citrate transporter Na_H_antiport_2 PF13726.6 ORF14811 - 0.00025 21.1 4.7 0.00025 21.1 4.7 3.0 3 1 1 4 4 4 1 Na+-H+ antiporter family DUF4017 PF13209.6 ORF14811 - 6.4 6.8 7.4 2.2 8.3 0.4 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF4017) PhyH PF05721.13 ORF103152 - 6e-08 33.2 0.0 1.5e-07 31.9 0.0 1.7 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Peptidase_S74 PF13884.6 NODE_11940_length_1275_cov_13.437097_g8885_i0forward_frame_2 - 4.8e-08 33.2 0.0 8.7e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase IDO PF01231.18 ORF9913 - 1.1e-11 44.2 0.0 4.7e-05 22.4 0.0 2.3 1 1 1 2 2 2 2 Indoleamine 2,3-dioxygenase Cullin PF00888.22 ORF97216 - 2.4e-31 109.0 13.1 2.4e-31 109.0 13.1 2.1 1 1 1 2 2 2 1 Cullin family FAM25 PF15825.5 ORF97216 - 0.1 12.9 0.6 4.8 7.6 0.2 2.6 2 0 0 2 2 2 0 FAM25 family Thg1 PF04446.12 ORF97216 - 0.16 12.0 0.0 0.16 12.0 0.0 2.8 3 1 0 3 3 3 0 tRNAHis guanylyltransferase Nucleoporin2 PF04096.14 ORF96537 - 3.2e-30 105.2 0.0 4.7e-30 104.7 0.0 1.2 1 0 0 1 1 1 1 Nucleoporin autopeptidase MT PF12777.7 ORF96537 - 3e-05 23.2 0.1 4.1e-05 22.8 0.1 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor UPF0004 PF00919.20 ORF96537 - 0.12 12.5 0.1 3.7 7.7 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized protein family UPF0004 SpoVS PF04232.12 ORF95710 - 1.1 9.0 3.4 11 5.8 0.3 2.9 3 0 0 3 3 3 0 Stage V sporulation protein S (SpoVS) Cadherin-like PF12733.7 ORF77792 - 0.0012 19.4 0.0 0.32 11.5 0.1 3.1 2 2 0 2 2 2 2 Cadherin-like beta sandwich domain DDE_3 PF13358.6 ORF74656 - 0.0043 16.8 0.0 0.0099 15.6 0.0 1.6 1 0 0 1 1 1 1 DDE superfamily endonuclease RNA12 PF10443.9 ORF74656 - 0.088 11.5 0.0 0.16 10.7 0.0 1.3 1 0 0 1 1 1 0 RNA12 protein PEP-utilizers_C PF02896.18 ORF70531 - 2.7e-90 302.4 0.0 3.7e-90 302.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PTS_EIIA_2 PF00359.22 ORF70531 - 1.4e-33 115.8 0.0 2.6e-33 114.9 0.0 1.4 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Nucleoside_tran PF01733.18 ORF62214 - 0.0014 18.1 6.5 0.0014 18.1 6.5 2.0 2 1 0 2 2 2 1 Nucleoside transporter SLATT_fungal PF18142.1 ORF62214 - 0.0086 16.1 2.1 0.022 14.7 2.1 1.7 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain Gly-zipper_Omp PF13488.6 ORF62214 - 0.84 9.7 9.1 2.5 8.2 9.1 1.8 1 0 0 1 1 1 0 Glycine zipper NADH-u_ox-rdase PF10785.9 ORF62214 - 3.5 8.4 7.1 4.2 8.1 0.4 3.0 2 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit Rick_17kDa_Anti PF05433.15 ORF62214 - 9.4 6.2 11.0 45 4.0 11.0 2.2 1 1 0 1 1 1 0 Glycine zipper 2TM domain Acetyltransf_3 PF13302.7 ORF54710 - 0.0027 18.4 0.0 0.0051 17.5 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain RICTOR_V PF14668.6 ORF52665 - 1.7e-19 69.8 1.9 8.1e-19 67.6 0.1 3.0 4 0 0 4 4 4 1 Rapamycin-insensitive companion of mTOR, domain 5 RasGEF_N_2 PF14663.6 ORF52665 - 1.3e-12 48.1 0.8 4.2e-11 43.2 0.1 2.4 2 0 0 2 2 2 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain TcpQ PF10671.9 ORF51993 - 0.027 14.6 0.1 0.057 13.6 0.1 1.5 1 0 0 1 1 1 0 Toxin co-regulated pilus biosynthesis protein Q DUF4328 PF14219.6 ORF3964 - 0.0032 17.1 3.4 0.0032 17.1 3.4 2.7 3 0 0 3 3 3 1 Domain of unknown function (DUF4328) DUF4131 PF13567.6 ORF3964 - 0.015 15.0 5.3 1.2 8.8 0.2 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) FtsX PF02687.21 ORF3964 - 0.95 10.0 8.6 16 6.1 2.1 3.4 2 1 0 2 2 2 0 FtsX-like permease family RICTOR_V PF14668.6 ORF28429 - 1.7e-19 69.8 1.9 8.1e-19 67.6 0.1 3.0 4 0 0 4 4 4 1 Rapamycin-insensitive companion of mTOR, domain 5 RasGEF_N_2 PF14663.6 ORF28429 - 1.3e-12 48.1 0.8 4.2e-11 43.2 0.1 2.4 2 0 0 2 2 2 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain HEAT PF02985.22 ORF23899 - 5.5e-07 29.3 0.0 0.076 13.3 0.0 3.3 3 0 0 3 3 3 2 HEAT repeat Cnd1 PF12717.7 ORF23899 - 0.00015 21.9 0.7 0.0048 17.0 0.1 2.8 2 0 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 ORF23899 - 0.0063 17.0 0.0 0.062 13.8 0.0 2.5 1 1 1 2 2 2 1 HEAT-like repeat HEAT_2 PF13646.6 ORF23899 - 0.0079 16.6 0.0 0.065 13.6 0.0 2.4 2 0 0 2 2 2 1 HEAT repeats Arm PF00514.23 ORF23899 - 0.01 15.9 0.0 59 3.9 0.0 4.6 5 0 0 5 5 5 0 Armadillo/beta-catenin-like repeat DUF3361 PF11841.8 ORF23899 - 0.14 12.1 0.8 0.7 9.8 0.2 2.5 2 2 0 2 2 2 0 Domain of unknown function (DUF3361) His_Phos_2 PF00328.22 ORF19152 - 5.4e-06 26.0 0.0 0.0021 17.4 0.0 2.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) Peptidase_S10 PF00450.22 NODE_12049_length_1270_cov_103.320648_g8973_i1forward_frame_3 - 1.5e-63 215.6 1.1 2.8e-63 214.8 1.1 1.4 1 1 0 1 1 1 1 Serine carboxypeptidase Connexin43 PF03508.13 NODE_12049_length_1270_cov_103.320648_g8973_i1forward_frame_3 - 0.25 11.0 0.6 0.54 9.9 0.6 1.5 1 0 0 1 1 1 0 Gap junction alpha-1 protein (Cx43) Peptidase_S10 PF00450.22 NODE_12048_length_1270_cov_109.480162_g8973_i0reverse_frame_3 - 5.7e-64 217.0 0.7 1e-63 216.2 0.7 1.3 1 1 0 1 1 1 1 Serine carboxypeptidase Connexin43 PF03508.13 NODE_12048_length_1270_cov_109.480162_g8973_i0reverse_frame_3 - 0.25 10.9 0.6 0.54 9.9 0.6 1.5 1 0 0 1 1 1 0 Gap junction alpha-1 protein (Cx43) Chloroa_b-bind PF00504.21 ORF99182 - 1.8e-33 116.3 0.0 3.1e-33 115.6 0.0 1.4 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Rieske PF00355.26 ORF99182 - 5.7e-12 45.4 0.0 1.1e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF99182 - 1.1e-06 28.4 0.0 1.8e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain ClpB_D2-small PF10431.9 ORF93837 - 0.16 12.0 0.0 2.6 8.1 0.0 2.6 3 0 0 3 3 3 0 C-terminal, D2-small domain, of ClpB protein WYL PF13280.6 ORF87720 - 0.077 13.0 2.7 0.17 11.9 2.7 1.5 1 0 0 1 1 1 0 WYL domain FlaC_arch PF05377.11 ORF87720 - 0.42 11.1 3.1 0.8 10.1 0.1 2.4 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DivIVA PF05103.13 ORF87720 - 5.5 7.1 15.6 11 6.1 13.8 2.3 1 1 1 2 2 2 0 DivIVA protein Chloroa_b-bind PF00504.21 ORF86750 - 1.8e-33 116.3 0.0 3.1e-33 115.6 0.0 1.4 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Rieske PF00355.26 ORF86750 - 5.7e-12 45.4 0.0 1.1e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF86750 - 1.1e-06 28.4 0.0 1.8e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Chloroa_b-bind PF00504.21 ORF8579 - 1.8e-33 116.3 0.0 3.1e-33 115.6 0.0 1.4 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Rieske PF00355.26 ORF8579 - 5.7e-12 45.4 0.0 1.1e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF8579 - 1.1e-06 28.4 0.0 1.8e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain DAO PF01266.24 ORF76583 - 4.5e-15 56.1 3.5 1.1e-08 35.0 0.6 2.5 1 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF76583 - 6.2e-10 38.7 2.3 2.6e-07 30.1 0.6 2.3 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 ORF76583 - 7.4e-10 38.1 0.0 5e-07 28.8 0.0 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_oxidored PF12831.7 ORF76583 - 6.2e-09 35.7 0.0 9.3e-09 35.1 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF76583 - 3.3e-08 33.1 0.0 9.4e-08 31.6 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF76583 - 1.5e-07 31.6 0.1 5.5e-07 29.7 0.1 2.0 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 ORF76583 - 1.7e-07 30.8 0.7 8.3e-07 28.6 0.7 2.2 1 1 0 1 1 1 1 FAD binding domain GIDA PF01134.22 ORF76583 - 5.5e-07 29.0 0.0 1e-05 24.8 0.0 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 ORF76583 - 7.1e-06 25.1 0.2 0.085 11.7 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase Lycopene_cycl PF05834.12 ORF76583 - 1e-05 24.8 1.1 5.2e-05 22.5 1.1 1.9 1 1 0 1 1 1 1 Lycopene cyclase protein Thi4 PF01946.17 ORF76583 - 3.8e-05 23.0 0.0 6.6e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 ORF76583 - 0.00051 19.4 1.7 0.0012 18.2 1.2 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF76583 - 0.01 16.4 0.0 1.3 9.7 0.0 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 ORF76583 - 0.016 15.1 0.0 0.048 13.5 0.0 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 ORF76583 - 0.19 11.4 0.1 0.3 10.7 0.1 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA MFS_1 PF07690.16 ORF63116 - 5.3e-16 58.5 28.5 5.3e-16 58.5 28.5 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily Peptidase_C69 PF03577.15 ORF57958 - 5.3e-40 137.6 0.5 6.3e-40 137.3 0.5 1.0 1 0 0 1 1 1 1 Peptidase family C69 Tme5_EGF_like PF09064.10 ORF57958 - 0.84 9.6 2.9 1.6 8.7 2.9 1.3 1 0 0 1 1 1 0 Thrombomodulin like fifth domain, EGF-like Dus PF01207.17 ORF55635 - 1.2e-24 87.0 0.0 4.3e-24 85.2 0.0 1.8 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) DAP3 PF10236.9 ORF55635 - 1e-05 24.9 0.0 2.9e-05 23.4 0.0 1.7 1 1 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 COesterase PF00135.28 ORF5561 - 4.3e-17 62.2 0.4 2e-16 60.0 0.4 1.8 1 1 0 1 1 1 1 Carboxylesterase family Abhydrolase_3 PF07859.13 ORF5561 - 2.2e-13 50.5 0.2 4.2e-13 49.7 0.1 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 ORF5561 - 6.9e-07 29.0 0.1 0.00082 18.9 0.0 2.3 2 0 0 2 2 2 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF5561 - 0.013 14.8 0.5 0.89 8.8 0.1 2.3 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 ORF5561 - 0.035 13.9 0.0 0.67 9.7 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase DUF4473 PF14747.6 ORF43877 - 0.074 13.6 0.2 0.17 12.4 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) MDD_C PF18376.1 ORF35464 - 3.2e-54 183.5 1.6 6.1e-54 182.6 1.6 1.5 1 0 0 1 1 1 1 Mevalonate 5-diphosphate decarboxylase C-terminal domain GHMP_kinases_N PF00288.26 ORF35464 - 7e-06 26.2 1.5 2e-05 24.7 1.5 1.8 1 0 0 1 1 1 1 GHMP kinases N terminal domain Chloroa_b-bind PF00504.21 ORF27964 - 1.8e-33 116.3 0.0 3.1e-33 115.6 0.0 1.4 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Rieske PF00355.26 ORF27964 - 5.7e-12 45.4 0.0 1.1e-11 44.5 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF27964 - 1.1e-06 28.4 0.0 1.8e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain DUF1254 PF06863.12 ORF21278 - 2.1e-25 89.3 0.1 1.7e-24 86.4 0.0 2.2 2 1 1 3 3 3 1 Protein of unknown function (DUF1254) DUF1214 PF06742.11 ORF21278 - 8.4e-23 80.9 0.0 1.9e-22 79.8 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1214) DM13 PF10517.9 ORF21278 - 0.12 13.0 0.0 0.24 12.0 0.0 1.5 1 0 0 1 1 1 0 Electron transfer DM13 ClpB_D2-small PF10431.9 ORF18003 - 0.16 12.0 0.0 2.6 8.1 0.0 2.6 3 0 0 3 3 3 0 C-terminal, D2-small domain, of ClpB protein FAD_binding_2 PF00890.24 ORF1161 - 3.9e-68 230.5 1.4 2.2e-67 228.0 0.4 2.0 2 0 0 2 2 2 1 FAD binding domain Succ_DH_flav_C PF02910.20 ORF1161 - 1.3e-38 131.9 1.0 1.9e-38 131.3 1.0 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term FAD_binding_2 PF00890.24 ORF106456 - 3.9e-68 230.5 1.4 2.2e-67 228.0 0.4 2.0 2 0 0 2 2 2 1 FAD binding domain Succ_DH_flav_C PF02910.20 ORF106456 - 1.3e-38 131.9 1.0 1.9e-38 131.3 1.0 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Ion_trans PF00520.31 ORF101494 - 3.5e-17 62.4 13.2 4.8e-17 62.0 13.2 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF101494 - 4.1e-09 35.6 0.0 0.0015 18.3 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF101494 - 1.4e-07 31.8 3.8 3e-05 24.4 0.3 2.3 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF101494 - 2.1e-07 30.0 0.7 0.0028 17.1 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF101494 - 7.9e-06 25.6 0.2 0.12 12.2 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF101494 - 0.0031 16.9 3.0 0.47 10.0 0.1 3.0 2 1 0 2 2 2 2 EF hand DPM3 PF08285.11 ORF101494 - 0.27 11.5 0.1 0.27 11.5 0.1 2.4 3 0 0 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) LicD PF04991.13 ORF92371 - 0.011 15.8 0.0 0.14 12.2 0.0 2.1 2 0 0 2 2 2 0 LicD family EF-hand_1 PF00036.32 ORF88277 - 0.0011 18.4 0.3 0.0023 17.4 0.3 1.6 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF88277 - 0.0084 16.5 0.2 0.024 15.1 0.2 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF88277 - 0.02 14.8 0.1 0.055 13.4 0.1 1.8 1 0 0 1 1 1 0 EF-hand domain EF-hand_8 PF13833.6 ORF88277 - 0.18 11.7 1.4 7.6 6.5 0.8 2.5 2 0 0 2 2 2 0 EF-hand domain pair 2OG-FeII_Oxy_3 PF13640.6 ORF87134 - 6.9e-18 65.3 0.3 1.7e-17 64.1 0.0 1.9 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily Peptidase_C2 PF00648.21 ORF86176 - 8e-69 231.9 0.1 1.1e-68 231.4 0.1 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease bPH_4 PF06713.11 ORF81597 - 0.054 13.6 0.1 0.22 11.6 0.1 2.1 1 0 0 1 1 1 0 Bacterial PH domain CRM1_C PF08767.11 ORF70800 - 2.5e-83 279.9 0.1 4.1e-83 279.2 0.1 1.3 1 0 0 1 1 1 1 CRM1 C terminal Peptidase_C2 PF00648.21 ORF66541 - 8e-69 231.9 0.1 1.1e-68 231.4 0.1 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Dpoe2NT PF12213.8 ORF65479 - 0.33 11.3 2.7 54 4.2 0.1 3.7 3 0 0 3 3 3 0 DNA polymerases epsilon N terminal IQ PF00612.27 ORF65479 - 1.5 8.8 6.8 0.24 11.3 0.5 3.0 3 0 0 3 3 3 0 IQ calmodulin-binding motif Nucleoporin_FG PF13634.6 ORF63078 - 0.18 12.6 12.9 5.1 8.0 8.5 2.7 2 1 0 2 2 2 0 Nucleoporin FG repeat region PhoD PF09423.10 ORF62432 - 3.4e-28 98.7 0.0 1.9e-24 86.4 0.0 3.1 1 1 0 1 1 1 1 PhoD-like phosphatase EIF_2_alpha PF07541.12 ORF5521 - 0.28 11.3 0.7 1.3 9.1 0.0 2.2 3 0 0 3 3 3 0 Eukaryotic translation initiation factor 2 alpha subunit ATP-sulfurylase PF01747.17 ORF53752 - 7.1e-66 221.7 0.0 9.7e-66 221.3 0.0 1.1 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.6 ORF53752 - 1.4e-41 141.8 0.0 2.2e-41 141.2 0.0 1.2 1 0 0 1 1 1 1 PUA-like domain UCH PF00443.29 ORF51914 - 2.4e-21 76.4 0.0 2.4e-21 76.4 0.0 2.2 1 1 1 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF51914 - 4.7e-10 39.6 16.4 1.5e-08 34.6 16.4 2.7 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase AAA_lid_11 PF18198.1 ORF51914 - 0.026 14.4 0.2 0.061 13.1 0.2 1.7 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain Pkinase PF00069.25 ORF3170 - 2e-45 155.3 0.0 2.9e-45 154.7 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF3170 - 2.5e-22 79.4 0.0 3.5e-22 78.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF3170 - 1.9e-08 34.0 0.0 2.8e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF3170 - 5.7e-06 25.8 0.1 1.4e-05 24.6 0.0 1.6 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF3170 - 0.00035 19.5 0.0 0.00079 18.3 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF3170 - 0.0033 17.4 0.0 0.0084 16.1 0.0 1.6 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF3170 - 0.03 13.3 0.0 0.047 12.6 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain DUF3237 PF11578.8 ORF3170 - 0.13 12.1 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) Histone PF00125.24 ORF28674 - 1.2e-10 41.8 0.0 1.2e-10 41.8 0.0 4.0 2 2 2 4 4 4 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 ORF28674 - 4.8e-07 29.4 0.0 4.8e-07 29.4 0.0 2.8 3 0 0 3 3 3 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 ORF28674 - 0.0087 16.3 0.0 0.02 15.2 0.0 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF2459 - 1.2e-10 41.8 0.0 1.2e-10 41.8 0.0 4.0 2 2 2 4 4 4 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 ORF2459 - 4.8e-07 29.4 0.0 4.8e-07 29.4 0.0 2.8 3 0 0 3 3 3 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 ORF2459 - 0.0087 16.3 0.0 0.02 15.2 0.0 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone VDE PF07137.11 ORF23928 - 1.5e-31 109.8 0.0 2.5e-31 109.1 0.0 1.3 1 0 0 1 1 1 1 VDE lipocalin domain Peptidase_C2 PF00648.21 ORF106392 - 8e-69 231.9 0.1 1.1e-68 231.4 0.1 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease DHC_N2 PF08393.13 ORF105952 - 4.8e-105 351.9 13.9 6e-105 351.6 13.9 1.1 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 ERK-JNK_inhib PF15002.6 ORF105952 - 0.24 11.1 0.1 0.24 11.1 0.1 3.1 3 0 0 3 3 3 0 ERK and JNK pathways, inhibitor Ion_trans PF00520.31 ORF102265 - 3.5e-19 69.0 10.8 4.8e-19 68.5 10.8 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF102265 - 5.8e-10 38.0 5.5 1.6e-05 24.1 0.4 3.0 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF102265 - 1.3e-09 38.4 2.4 2.9e-09 37.3 2.3 1.8 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF102265 - 3.3e-09 35.9 2.6 0.00049 19.8 0.2 3.2 2 1 1 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF102265 - 4.6e-09 35.4 0.3 0.00035 19.9 0.3 2.8 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF102265 - 1.2e-07 31.5 2.5 0.0048 16.7 1.1 3.5 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF102265 - 0.16 11.9 1.1 18 5.3 0.0 2.6 1 1 1 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF102265 - 0.21 11.6 0.4 0.48 10.4 0.1 1.7 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand TMEM164 PF14808.6 ORF102265 - 4.5 6.5 10.2 0.037 13.4 0.7 2.2 3 0 0 3 3 3 0 TMEM164 family RCC1_2 PF13540.6 NODE_12175_length_1264_cov_91.127746_g9078_i0forward_frame_3 - 0.023 14.5 0.0 0.3 10.9 0.0 2.5 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat MFS_1 PF07690.16 ORF95301 - 5.1e-23 81.6 33.2 5.1e-23 81.6 33.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Vps54 PF07928.12 ORF94741 - 4.2e-30 104.9 1.4 7.9e-30 104.0 1.4 1.5 1 0 0 1 1 1 1 Vps54-like protein Thioredoxin PF00085.20 ORF94559 - 7.4e-23 80.5 0.1 1.7e-19 69.7 0.0 3.1 3 0 0 3 3 3 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF94559 - 6.4e-18 65.3 10.2 5.9e-13 49.1 0.2 3.9 1 1 3 4 4 4 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF94559 - 8.4e-07 29.4 0.8 0.0001 22.7 0.2 3.7 1 1 2 3 3 3 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF94559 - 5.1e-05 23.4 0.3 0.0019 18.4 0.0 3.0 3 0 0 3 3 3 1 Thioredoxin-like Calsequestrin PF01216.17 ORF94559 - 0.00013 21.2 1.6 0.00021 20.4 1.6 1.3 1 0 0 1 1 1 1 Calsequestrin Thioredoxin_8 PF13905.6 ORF94559 - 0.0057 17.0 1.3 0.52 10.7 0.3 3.8 3 1 0 3 3 3 1 Thioredoxin-like ERp29_N PF07912.13 ORF94559 - 0.03 14.5 1.6 0.22 11.7 0.3 2.7 2 0 0 2 2 2 0 ERp29, N-terminal domain PepSY_2 PF13670.6 ORF94559 - 0.12 12.4 0.1 0.24 11.4 0.1 1.4 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain AA_permease_2 PF13520.6 ORF92564 - 7.6e-21 74.4 22.8 1e-20 74.0 22.8 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF92564 - 1.1e-18 67.1 19.9 1.5e-17 63.4 19.9 2.0 1 1 0 1 1 1 1 Amino acid permease UDPGT PF00201.18 ORF91631 - 1.6e-11 43.7 0.0 2.6e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF91631 - 3.2e-06 27.2 0.0 5.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain HABP4_PAI-RBP1 PF04774.15 ORF90812 - 4.1e-06 27.6 14.5 4.1e-06 27.6 14.5 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family Lipocalin_2 PF08212.12 ORF8943 - 1.7e-25 89.7 0.0 3.3e-25 88.7 0.0 1.5 1 0 0 1 1 1 1 Lipocalin-like domain adh_short PF00106.25 ORF8943 - 5.3e-07 29.3 0.0 0.011 15.1 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF8943 - 0.00016 21.4 0.0 0.0024 17.5 0.0 2.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 ORF8943 - 0.016 14.7 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Amidohydro_2 PF04909.14 ORF8943 - 0.019 14.8 0.0 0.042 13.6 0.0 1.6 2 0 0 2 2 2 0 Amidohydrolase MFS_1 PF07690.16 ORF87107 - 5.6e-14 51.8 32.9 5.6e-14 51.8 32.9 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily UDPGT PF00201.18 ORF86924 - 1.6e-11 43.7 0.0 2.6e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF86924 - 3.2e-06 27.2 0.0 5.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Lig_chan PF00060.26 ORF83122 - 0.0038 17.1 1.3 0.0055 16.6 1.0 1.3 1 1 0 1 1 1 1 Ligand-gated ion channel DUF1646 PF07854.12 ORF83122 - 0.12 11.7 0.1 0.18 11.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1646) F5_F8_type_C PF00754.25 ORF79446 - 7.8e-05 22.8 0.2 0.013 15.6 0.1 3.2 2 1 1 3 3 3 1 F5/8 type C domain Cyt_bd_oxida_I PF01654.17 ORF75448 - 1.3e-117 393.0 11.5 1.5e-117 392.8 11.5 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I DUF3099 PF11298.8 ORF75448 - 0.29 11.3 1.7 1.4 9.1 1.7 2.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) UDPGT PF00201.18 ORF73535 - 1.6e-11 43.7 0.0 2.6e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF73535 - 3.2e-06 27.2 0.0 5.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain HABP4_PAI-RBP1 PF04774.15 ORF71869 - 4.1e-06 27.6 14.5 4.1e-06 27.6 14.5 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family SNF PF00209.18 ORF70440 - 3.7e-60 204.1 27.0 2.3e-59 201.5 27.0 1.8 1 1 0 1 1 1 1 Sodium:neurotransmitter symporter family Alpha-amylase PF00128.24 ORF69075 - 6.3e-11 42.4 0.0 7.1e-07 29.1 0.0 2.9 2 1 0 2 2 2 2 Alpha amylase, catalytic domain Alpha-amylase_C PF02806.18 ORF69075 - 1.9e-09 37.9 0.0 4.3e-09 36.7 0.0 1.6 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain DUF273 PF03314.14 ORF65446 - 0.048 13.2 0.1 0.17 11.4 0.0 1.9 3 0 0 3 3 3 0 Protein of unknown function, DUF273 UDPGT PF00201.18 ORF64926 - 1.6e-11 43.7 0.0 2.6e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF64926 - 3.2e-06 27.2 0.0 5.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain PB1 PF00564.24 ORF63189 - 0.00057 19.8 0.2 0.0019 18.1 0.1 2.0 2 0 0 2 2 2 1 PB1 domain DEAD PF00270.29 ORF60147 - 1.1e-45 155.5 0.0 2.2e-44 151.3 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF60147 - 5.4e-30 104.0 0.0 1.4e-28 99.4 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF60147 - 7.5e-06 26.0 0.0 1.3e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 ORF60147 - 0.0037 16.5 0.0 0.0054 16.0 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 ORF60147 - 0.023 14.9 0.1 0.087 13.1 0.1 2.0 1 1 0 1 1 1 0 AAA domain ThrE PF06738.12 ORF55754 - 4.5e-19 68.8 8.2 4.5e-19 68.8 8.2 2.1 2 0 0 2 2 2 1 Putative threonine/serine exporter UDPGT PF00201.18 ORF54660 - 1.6e-11 43.7 0.0 2.6e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF54660 - 3.2e-06 27.2 0.0 5.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Baculo_PEP_C PF04513.12 ORF52959 - 0.047 13.7 1.3 3.5 7.7 0.0 2.7 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus YopE PF03545.13 ORF52959 - 0.087 13.0 0.0 0.39 10.9 0.0 2.1 1 0 0 1 1 1 0 Yersinia virulence determinant (YopE) FlaC_arch PF05377.11 ORF52959 - 0.55 10.7 9.0 5.5 7.5 0.6 4.4 4 0 0 4 4 4 0 Flagella accessory protein C (FlaC) YojJ PF10372.9 ORF52959 - 1.8 8.7 6.1 6.5 6.9 0.2 3.7 2 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus CREPT PF16566.5 ORF52959 - 5.6 7.1 27.1 1.9 8.7 5.0 4.0 2 1 1 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour DUF4250 PF14056.6 ORF52959 - 6.4 6.8 5.1 33 4.5 0.0 3.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4250) HABP4_PAI-RBP1 PF04774.15 ORF48675 - 4.1e-06 27.6 14.5 4.1e-06 27.6 14.5 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family PsaA_PsaB PF00223.19 ORF37744 - 4.3e-41 140.9 22.3 8.2e-29 100.3 10.2 3.9 1 1 2 3 3 3 3 Photosystem I psaA/psaB protein HTH_9 PF08221.11 ORF37744 - 0.005 16.9 1.2 0.25 11.5 1.0 2.5 1 1 1 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF1077 PF06417.12 ORF37744 - 0.16 11.9 1.5 0.57 10.2 0.8 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1077) CNOT1_TTP_bind PF16417.5 ORF33026 - 4.3e-20 71.7 0.0 7.9e-20 70.8 0.0 1.4 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain Sin_N PF04801.13 ORF32049 - 1.6e-24 86.9 2.9 9.6e-20 71.2 1.0 2.1 2 0 0 2 2 2 2 Sin-like protein conserved region Gon7 PF08738.10 ORF32049 - 0.075 13.1 0.1 6 7.0 0.0 2.6 3 0 0 3 3 3 0 Gon7 family UDPGT PF00201.18 ORF28653 - 1.6e-11 43.7 0.0 2.6e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF28653 - 3.2e-06 27.2 0.0 5.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain MFS_1 PF07690.16 ORF17328 - 5.1e-23 81.6 33.2 5.1e-23 81.6 33.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily HABP4_PAI-RBP1 PF04774.15 ORF12314 - 4.1e-06 27.6 14.5 4.1e-06 27.6 14.5 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family UDPGT PF00201.18 ORF105028 - 1.6e-11 43.7 0.0 2.6e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF105028 - 3.2e-06 27.2 0.0 5.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain UDPGT PF00201.18 ORF102783 - 1.6e-11 43.7 0.0 2.6e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF102783 - 3.2e-06 27.2 0.0 5.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain DUF1479 PF07350.12 ORF100092 - 2e-144 481.5 0.0 2.4e-144 481.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1479) COMP PF11598.8 ORF100092 - 0.11 12.9 0.1 0.21 12.1 0.1 1.4 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein Spc7 PF08317.11 NODE_12249_length_1260_cov_104.725714_g9142_i0forward_frame_1 - 0.073 11.9 37.5 0.37 9.6 37.4 2.1 1 1 0 1 1 1 0 Spc7 kinetochore protein Golgin_A5 PF09787.9 NODE_12249_length_1260_cov_104.725714_g9142_i0forward_frame_1 - 0.11 12.0 28.5 0.25 10.8 28.5 1.7 1 0 0 1 1 1 0 Golgin subfamily A member 5 Dermcidin PF15291.6 NODE_12249_length_1260_cov_104.725714_g9142_i0forward_frame_1 - 7.2 7.2 6.5 1.5 9.4 1.1 2.3 1 1 0 2 2 2 0 Dermcidin, antibiotic peptide PUB PF09409.10 ORF99028 - 1.3e-08 34.7 0.0 2.4e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 PUB domain zf-C2HC_2 PF13913.6 ORF99028 - 2.4e-06 27.3 4.0 2.4e-06 27.3 4.0 2.6 3 0 0 3 3 3 1 zinc-finger of a C2HC-type CRISPR_Cse2 PF09485.10 ORF99028 - 0.016 15.7 0.1 0.029 14.9 0.1 1.5 1 0 0 1 1 1 0 CRISPR-associated protein Cse2 (CRISPR_cse2) Pkinase PF00069.25 ORF92886 - 2.3e-50 171.4 0.1 4e-50 170.6 0.1 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92886 - 2.8e-23 82.5 0.1 1.3e-22 80.3 0.0 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF92886 - 7.6e-06 25.5 0.0 1.6e-05 24.4 0.0 1.5 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF92886 - 0.00072 19.0 0.0 0.0012 18.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF92886 - 0.0021 18.0 0.0 0.0035 17.3 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF92886 - 0.016 14.1 0.0 0.028 13.4 0.0 1.4 1 0 0 1 1 1 0 Haspin like kinase domain Choline_kinase PF01633.20 ORF92886 - 0.046 13.3 0.0 0.11 12.1 0.0 1.6 1 0 0 1 1 1 0 Choline/ethanolamine kinase PPR_long PF17177.4 ORF92886 - 0.098 12.0 0.1 0.16 11.3 0.1 1.3 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP TetR_C_8 PF14278.6 ORF92886 - 0.61 10.2 3.5 10 6.3 0.2 3.7 3 1 0 3 3 3 0 Transcriptional regulator C-terminal region s48_45 PF07422.13 ORF7931 - 0.0072 16.9 0.7 0.47 11.1 0.1 2.5 2 0 0 2 2 2 2 Sexual stage antigen s48/45 domain Adaptin_N PF01602.20 ORF7917 - 1.6e-28 99.6 0.1 2e-28 99.3 0.1 1.1 1 0 0 1 1 1 1 Adaptin N terminal region Alpha_adaptinC2 PF02883.20 ORF7917 - 0.0053 17.0 0.1 0.0098 16.2 0.1 1.4 1 0 0 1 1 1 1 Adaptin C-terminal domain GAGA_bind PF06217.12 ORF7917 - 0.06 13.6 4.9 0.088 13.1 4.9 1.3 1 0 0 1 1 1 0 GAGA binding protein-like family Suf PF05843.14 ORF7917 - 0.088 12.8 1.9 0.13 12.3 1.9 1.2 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) HEAT_2 PF13646.6 ORF7917 - 0.096 13.1 0.0 0.54 10.7 0.0 2.1 1 1 1 2 2 2 0 HEAT repeats RRN3 PF05327.11 ORF7917 - 0.1 11.1 11.0 0.081 11.5 8.2 1.9 2 0 0 2 2 2 0 RNA polymerase I specific transcription initiation factor RRN3 RR_TM4-6 PF06459.12 ORF7917 - 0.55 10.0 12.0 0.82 9.4 12.0 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF2052 PF09747.9 ORF7917 - 0.88 9.7 13.1 1.4 9.0 13.1 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) PGA2 PF07543.12 ORF7917 - 0.88 9.6 13.3 1.7 8.6 13.3 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 PTPRCAP PF15713.5 ORF7917 - 1.1 9.5 10.6 1.9 8.8 10.6 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated YqfQ PF14181.6 ORF7917 - 5.6 7.1 13.2 14 5.8 13.2 1.7 1 0 0 1 1 1 0 YqfQ-like protein Med19 PF10278.9 ORF7917 - 6.8 6.6 17.6 14 5.5 17.6 1.6 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 CDC45 PF02724.14 ORF7917 - 8.2 4.6 12.0 11 4.2 12.0 1.1 1 0 0 1 1 1 0 CDC45-like protein Presenilin PF01080.17 ORF7917 - 9.1 4.9 6.7 13 4.4 6.7 1.2 1 0 0 1 1 1 0 Presenilin YjcQ PF09639.10 ORF78983 - 0.0036 17.5 0.1 0.14 12.3 0.0 3.1 3 1 0 3 3 3 1 YjcQ protein AP_endonuc_2 PF01261.24 ORF78983 - 0.057 12.9 0.0 0.22 10.9 0.0 1.8 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel UDPG_MGDP_dh_N PF03721.14 ORF77839 - 2.3e-63 213.2 0.2 5.6e-61 205.4 0.0 2.2 2 0 0 2 2 2 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 ORF77839 - 2.8e-27 94.7 0.0 5.2e-27 93.9 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 ORF77839 - 1.9e-18 66.8 0.0 5.3e-18 65.4 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 ORF77839 - 1.3e-06 28.7 0.1 1.6e-05 25.1 0.0 2.5 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 ORF77839 - 0.0012 18.2 0.2 0.24 10.7 0.1 2.3 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 ORF77839 - 0.0082 16.4 1.5 0.02 15.1 0.2 2.4 3 0 0 3 3 3 1 TrkA-N domain 3HCDH_N PF02737.18 ORF77839 - 0.012 15.5 0.1 0.026 14.4 0.1 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 ORF77839 - 0.015 14.9 0.3 0.3 10.7 0.1 2.9 2 1 0 2 2 2 0 Ketopantoate reductase PanE/ApbA CIF PF16374.5 ORF77839 - 0.029 14.4 0.0 0.056 13.5 0.0 1.4 1 0 0 1 1 1 0 Cycle inhibiting factor (CIF) NAD_Gly3P_dh_N PF01210.23 ORF77839 - 0.11 12.5 0.4 20 5.1 0.1 2.8 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAST_1 PF06743.15 ORF73309 - 8.9e-10 38.4 0.5 0.0018 18.2 0.0 5.3 2 2 5 7 7 7 2 FAST kinase-like protein, subdomain 1 Peptidase_S10 PF00450.22 ORF71060 - 1.2e-83 281.9 0.2 1.7e-83 281.4 0.2 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase DXP_reductoisom PF02670.16 ORF67182 - 0.22 12.2 0.5 1.1 10.0 0.5 2.1 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Asparaginase_2 PF01112.18 ORF67182 - 8.3 5.3 8.7 0.66 8.9 1.5 2.2 2 0 0 2 2 2 0 Asparaginase WW PF00397.26 ORF61496 - 9.1e-21 73.6 20.6 1.2e-07 31.6 1.3 4.6 4 0 0 4 4 4 4 WW domain WW_1 PF18507.1 ORF61496 - 0.032 13.9 0.2 0.22 11.2 0.0 2.3 2 0 0 2 2 2 0 WW domain fn1 PF00039.18 ORF61496 - 0.12 12.5 1.8 14 5.9 0.3 2.7 2 0 0 2 2 2 0 Fibronectin type I domain Tagatose_6_P_K PF08013.11 ORF60378 - 3.8e-199 661.6 0.0 4.3e-199 661.5 0.0 1.0 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase F_bP_aldolase PF01116.20 ORF60378 - 0.00039 20.0 0.0 0.00061 19.4 0.0 1.2 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Ank_2 PF12796.7 ORF55669 - 1.1e-59 199.0 8.2 2.5e-14 53.6 0.2 5.9 1 1 5 6 6 6 6 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF55669 - 9.7e-59 195.0 10.1 1.5e-09 38.2 0.1 9.7 6 2 4 10 10 10 9 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF55669 - 1.9e-41 139.6 13.2 3.7e-08 33.5 0.0 8.8 4 3 6 10 10 10 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF55669 - 6.8e-39 127.4 9.2 0.0026 18.1 0.0 12.7 13 0 0 13 13 13 7 Ankyrin repeat Ank PF00023.30 ORF55669 - 1.1e-36 123.7 18.3 0.0023 18.3 0.0 11.8 9 3 2 11 11 11 10 Ankyrin repeat DUF4398 PF14346.6 ORF55669 - 0.0049 17.5 0.8 1.7 9.3 0.9 3.6 3 0 0 3 3 3 1 Domain of unknown function (DUF4398) DBD_Tnp_Hermes PF10683.9 ORF55669 - 0.049 13.3 0.0 60 3.4 0.0 4.0 4 0 0 4 4 4 0 Hermes transposase DNA-binding domain 6PGD PF00393.19 ORF55199 - 0.12 11.7 0.0 0.24 10.7 0.0 1.4 1 0 0 1 1 1 0 6-phosphogluconate dehydrogenase, C-terminal domain Peptidase_S10 PF00450.22 ORF53596 - 7.1e-84 282.6 0.2 9.8e-84 282.2 0.2 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase Orn_Arg_deC_N PF02784.16 ORF43699 - 1.1e-69 234.6 0.0 1.4e-69 234.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 ORF43699 - 5.5e-27 93.9 0.0 6.4e-27 93.7 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Glyco_transf_34 PF05637.12 ORF42377 - 4e-09 36.6 0.1 0.00023 21.0 0.0 2.3 1 1 1 2 2 2 2 galactosyl transferase GMA12/MNN10 family RRM_1 PF00076.22 ORF42377 - 0.0038 17.0 0.0 0.014 15.2 0.0 1.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TPR_12 PF13424.6 ORF39149 - 1.8e-13 50.6 12.6 0.00047 20.4 0.4 4.8 4 1 0 4 4 4 3 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF39149 - 0.0013 18.7 1.5 2.2 8.4 0.1 3.3 3 0 0 3 3 3 2 Anaphase-promoting complex subunit 5 TPR_2 PF07719.17 ORF39149 - 0.0014 18.6 12.0 16 5.9 0.0 6.6 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF39149 - 0.12 12.5 1.3 43 4.5 0.0 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF39149 - 0.21 11.9 5.1 32 4.8 0.1 4.8 3 3 2 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF39149 - 1.4 9.6 23.6 1.1 10.0 1.0 5.8 5 2 1 6 6 6 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF39149 - 3.5 8.2 11.7 5.3 7.6 0.6 3.9 3 1 1 4 4 4 0 Tetratricopeptide repeat LicD PF04991.13 ORF2541 - 1.3e-14 54.9 0.5 2.3e-10 41.0 0.5 2.4 2 0 0 2 2 2 2 LicD family CENP-F_leu_zip PF10473.9 ORF16062 - 0.0037 17.3 1.5 0.0037 17.3 1.5 3.6 4 1 0 4 4 4 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Shugoshin_N PF07558.11 ORF16062 - 0.032 14.1 2.3 0.3 11.0 0.2 3.2 2 1 1 3 3 3 0 Shugoshin N-terminal coiled-coil region DivIC PF04977.15 ORF16062 - 0.13 12.1 0.3 0.13 12.1 0.3 3.4 5 0 0 5 5 5 0 Septum formation initiator CCDC92 PF14916.6 ORF16062 - 0.14 12.0 2.8 6.9 6.5 0.0 3.1 2 1 1 3 3 3 0 Coiled-coil domain of unknown function Herpes_BLRF2 PF05812.12 ORF16062 - 0.25 11.5 7.9 0.99 9.6 1.2 3.1 2 1 0 2 2 2 0 Herpesvirus BLRF2 protein Seryl_tRNA_N PF02403.22 ORF16062 - 0.72 10.1 0.1 0.72 10.1 0.1 4.5 4 1 1 5 5 5 0 Seryl-tRNA synthetase N-terminal domain bZIP_1 PF00170.21 ORF16062 - 6.1 7.0 8.5 0.24 11.5 0.9 2.7 3 0 0 3 3 3 0 bZIP transcription factor DUF1843 PF08898.10 ORF16062 - 6.6 7.3 19.4 12 6.5 0.3 6.1 6 1 0 6 6 6 0 Domain of unknown function (DUF1843) CtIP_N PF10482.9 ORF16062 - 8.6 6.4 10.0 0.81 9.7 0.4 3.5 3 1 0 3 3 3 0 Tumour-suppressor protein CtIP N-terminal domain Beta_helix PF13229.6 ORF10929 - 6.1e-06 26.2 0.2 6.1e-06 26.2 0.2 2.4 2 0 0 2 2 2 1 Right handed beta helix region ABC_tran PF00005.27 ORF109221 - 3.8e-14 53.4 0.0 1.7e-13 51.3 0.0 2.1 3 0 0 3 3 3 1 ABC transporter AAA_21 PF13304.6 ORF109221 - 2.5e-10 40.7 0.0 9.5e-10 38.8 0.0 1.9 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF109221 - 0.00027 20.4 0.2 0.00087 18.8 0.0 1.8 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain FERM_C PF09380.10 ORF109221 - 0.06 13.7 0.1 0.58 10.6 0.0 2.4 2 0 0 2 2 2 0 FERM C-terminal PH-like domain SbcCD_C PF13558.6 ORF109221 - 0.11 12.7 0.0 1.8 8.9 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TMEM154 PF15102.6 ORF105940 - 0.027 14.4 0.4 0.052 13.4 0.4 1.4 1 0 0 1 1 1 0 TMEM154 protein family DUF3290 PF11694.8 ORF105940 - 0.076 13.0 0.6 0.076 13.0 0.6 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3290) ABC2_membrane_3 PF12698.7 ORF105940 - 5.6 6.0 12.6 4.6 6.3 0.2 2.5 2 1 0 2 2 2 0 ABC-2 family transporter protein Thiolase_N PF00108.23 ORF104377 - 1.1e-72 244.6 0.7 1.5e-72 244.1 0.7 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF104377 - 3.3e-47 159.2 0.5 1.4e-46 157.1 0.1 2.0 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF104377 - 0.0046 16.6 0.0 0.02 14.5 0.0 2.1 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III_C PF08541.10 ORF104377 - 0.0069 16.5 0.0 0.033 14.4 0.0 2.2 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LRR_6 PF13516.6 ORF102294 - 1.1e-22 78.1 10.2 0.0026 17.7 0.2 6.8 7 0 0 7 7 7 6 Leucine Rich repeat LRR_4 PF12799.7 ORF102294 - 3.1e-14 52.9 2.5 0.00046 20.5 0.0 4.7 2 2 1 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF102294 - 4.1e-12 45.7 2.6 2.7e-06 27.0 0.0 4.6 2 1 2 4 4 4 2 Leucine rich repeat LRR_1 PF00560.33 ORF102294 - 0.0013 19.0 5.4 2.4 9.0 0.0 6.2 7 1 0 7 7 7 1 Leucine Rich Repeat CDPS PF16715.5 NODE_12249_length_1260_cov_104.725714_g9142_i0forward_frame_2 - 0.35 10.5 2.8 0.62 9.7 2.8 1.3 1 0 0 1 1 1 0 Cyclodipeptide synthase Exonuc_VII_L PF02601.15 NODE_12249_length_1260_cov_104.725714_g9142_i0forward_frame_2 - 5.6 6.4 12.6 11 5.4 12.6 1.5 1 0 0 1 1 1 0 Exonuclease VII, large subunit zf-BED PF02892.15 ORF94851 - 0.0026 17.7 3.0 0.23 11.5 0.0 3.8 3 0 0 3 3 3 1 BED zinc finger HypA PF01155.19 ORF94851 - 0.37 10.8 7.5 1.3 9.0 0.1 3.4 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_6 PF14599.6 ORF94851 - 9.1 6.4 13.7 1.4 9.0 0.1 4.0 5 0 0 5 5 5 0 Zinc-ribbon p450 PF00067.22 ORF8501 - 2.9e-62 210.9 0.0 3.5e-62 210.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Asp_Arg_Hydrox PF05118.15 ORF80096 - 7.5e-37 126.6 0.0 1.2e-36 125.9 0.0 1.3 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase AChE_tetra PF08674.10 ORF76653 - 0.035 13.8 4.6 0.1 12.3 4.6 1.8 1 0 0 1 1 1 0 Acetylcholinesterase tetramerisation domain Hydrolase_4 PF12146.8 ORF73988 - 6.1e-10 38.8 0.0 1.3e-05 24.6 0.0 2.2 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF73988 - 5.3e-05 23.9 0.4 0.0003 21.5 0.4 2.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family DUF1057 PF06342.12 ORF73988 - 0.00076 18.6 0.0 0.0011 18.1 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1057) Abhydrolase_1 PF00561.20 ORF73988 - 0.0063 16.2 0.1 1.1 8.8 0.0 2.6 2 1 0 3 3 3 1 alpha/beta hydrolase fold FSH1 PF03959.13 ORF73988 - 0.015 14.9 0.0 0.023 14.4 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) LIDHydrolase PF10230.9 ORF73988 - 0.015 14.8 0.0 2 7.9 0.0 2.3 1 1 1 2 2 2 0 Lipid-droplet associated hydrolase Tannase PF07519.11 ORF73988 - 0.066 12.1 0.0 0.1 11.5 0.0 1.2 1 0 0 1 1 1 0 Tannase and feruloyl esterase Asp2 PF16929.5 ORF73988 - 0.089 11.7 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter Lectin_C PF00059.21 ORF73864 - 7.8e-24 84.5 8.6 1.8e-12 47.9 1.4 2.8 3 0 0 3 3 3 2 Lectin C-type domain UL45 PF05473.12 ORF73864 - 8.1e-06 25.6 0.3 0.041 13.5 0.1 2.5 2 0 0 2 2 2 2 UL45 protein, carbohydrate-binding C-type lectin-like NFACT-R_1 PF05670.13 ORF60394 - 1.4e-10 41.7 0.0 6.7e-10 39.6 0.0 2.2 1 0 0 1 1 1 1 NFACT protein RNA binding domain Rotamase PF00639.21 ORF58289 - 6.8e-13 49.4 0.0 2.8e-11 44.2 0.0 2.5 2 0 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF58289 - 8.9e-12 45.6 0.0 2e-11 44.5 0.0 1.6 1 0 0 1 1 1 1 PPIC-type PPIASE domain DnaJ PF00226.31 ORF58289 - 3.1e-07 30.4 0.0 4.9e-06 26.6 0.0 2.7 3 0 0 3 3 3 1 DnaJ domain Rotamase_2 PF13145.6 ORF58289 - 0.006 17.4 1.5 0.42 11.4 0.0 2.9 3 0 0 3 3 3 1 PPIC-type PPIASE domain Polysacc_deac_1 PF01522.21 ORF50001 - 1.1e-09 38.2 0.0 2.1e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Ureidogly_lyase PF04115.12 ORF50001 - 0.0057 16.4 0.0 0.0091 15.8 0.0 1.4 1 0 0 1 1 1 1 Ureidoglycolate lyase DUF2334 PF10096.9 ORF50001 - 0.01 15.5 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Glyco_hydro_57 PF03065.15 ORF50001 - 0.053 12.7 0.0 1.8 7.7 0.0 2.1 1 1 1 2 2 2 0 Glycosyl hydrolase family 57 DUF2020 PF09449.10 ORF50001 - 0.098 12.5 0.2 0.24 11.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF2020) AAA_7 PF12775.7 ORF43980 - 1.7e-77 259.0 0.1 3.6e-77 258.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region Dynein_AAA_lid PF17852.1 ORF43980 - 2.6e-23 82.5 2.4 2.3e-22 79.5 1.6 2.3 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_lid_1 PF17857.1 ORF43980 - 9.7e-19 67.4 0.4 2.2e-17 63.1 0.0 2.9 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF43980 - 9.9e-07 28.8 0.0 4.4e-06 26.7 0.0 2.1 2 1 1 3 3 3 1 AAA domain (dynein-related subfamily) AAA PF00004.29 ORF43980 - 0.00064 20.1 0.0 0.021 15.2 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) T2SSE PF00437.20 ORF43980 - 0.00091 18.4 0.0 0.0019 17.4 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 ORF43980 - 0.0015 18.8 0.0 0.083 13.2 0.0 2.3 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF43980 - 0.0071 15.8 0.0 1.5 8.1 0.0 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Rad17 PF03215.15 ORF43980 - 0.017 15.1 0.1 0.94 9.4 0.0 2.5 2 1 1 3 3 3 0 Rad17 P-loop domain DUF853 PF05872.12 ORF43980 - 0.19 10.3 0.0 0.27 9.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) MCM PF00493.23 ORF40650 - 7.4e-92 306.5 0.0 1e-91 306.0 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 ORF40650 - 3.8e-22 78.5 0.1 8.5e-22 77.4 0.1 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 ORF40650 - 5.3e-12 45.6 0.0 5.1e-08 32.5 0.0 2.7 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 ORF40650 - 6.1e-05 22.9 0.0 0.00016 21.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF40650 - 0.00023 21.2 0.0 0.0013 18.7 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 ORF40650 - 0.0023 17.7 0.1 0.85 9.3 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 ORF40650 - 0.0042 16.8 0.2 0.011 15.4 0.2 1.7 1 0 0 1 1 1 1 AAA domain DUF3987 PF13148.6 ORF40650 - 0.037 13.1 0.1 1.3 8.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) AAA_16 PF13191.6 ORF40650 - 0.061 13.7 0.6 0.31 11.4 0.6 2.5 1 1 0 1 1 1 0 AAA ATPase domain RuvB_N PF05496.12 ORF40650 - 0.085 12.6 0.3 0.66 9.7 0.3 2.4 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF40650 - 0.1 12.9 2.5 2.1 8.6 1.1 3.4 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 ORF40650 - 0.13 12.1 0.3 15 5.5 0.0 3.3 4 0 0 4 4 4 0 NACHT domain DnaI_N PF07319.11 ORF40650 - 0.26 12.0 3.0 8.7 7.1 0.2 3.4 1 1 3 4 4 4 0 Primosomal protein DnaI N-terminus MCM PF00493.23 ORF3616 - 7.4e-92 306.5 0.0 1e-91 306.0 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 ORF3616 - 3.8e-22 78.5 0.1 8.5e-22 77.4 0.1 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 ORF3616 - 5.3e-12 45.6 0.0 5.1e-08 32.5 0.0 2.7 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 ORF3616 - 6.1e-05 22.9 0.0 0.00016 21.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF3616 - 0.00023 21.2 0.0 0.0013 18.7 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 ORF3616 - 0.0023 17.7 0.1 0.85 9.3 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 ORF3616 - 0.0042 16.8 0.2 0.011 15.4 0.2 1.7 1 0 0 1 1 1 1 AAA domain DUF3987 PF13148.6 ORF3616 - 0.037 13.1 0.1 1.3 8.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) AAA_16 PF13191.6 ORF3616 - 0.061 13.7 0.6 0.31 11.4 0.6 2.5 1 1 0 1 1 1 0 AAA ATPase domain RuvB_N PF05496.12 ORF3616 - 0.085 12.6 0.3 0.66 9.7 0.3 2.4 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF3616 - 0.1 12.9 2.5 2.1 8.6 1.1 3.4 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 ORF3616 - 0.13 12.1 0.3 15 5.5 0.0 3.3 4 0 0 4 4 4 0 NACHT domain DnaI_N PF07319.11 ORF3616 - 0.26 12.0 3.0 8.7 7.1 0.2 3.4 1 1 3 4 4 4 0 Primosomal protein DnaI N-terminus SspB PF04386.13 ORF33286 - 0.063 13.2 0.4 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 Stringent starvation protein B SRP68 PF16969.5 ORF29729 - 3e-35 122.3 0.1 6.5e-27 94.8 0.0 2.0 1 1 1 2 2 2 2 RNA-binding signal recognition particle 68 TPR_12 PF13424.6 ORF29729 - 0.56 10.5 3.8 1.2 9.4 0.5 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat Polysacc_deac_1 PF01522.21 ORF24202 - 1.1e-09 38.2 0.0 2.1e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Ureidogly_lyase PF04115.12 ORF24202 - 0.0057 16.4 0.0 0.0091 15.8 0.0 1.4 1 0 0 1 1 1 1 Ureidoglycolate lyase DUF2334 PF10096.9 ORF24202 - 0.01 15.5 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Glyco_hydro_57 PF03065.15 ORF24202 - 0.053 12.7 0.0 1.8 7.7 0.0 2.1 1 1 1 2 2 2 0 Glycosyl hydrolase family 57 DUF2020 PF09449.10 ORF24202 - 0.098 12.5 0.2 0.24 11.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF2020) Ion_trans PF00520.31 ORF18692 - 2.7e-17 62.8 13.3 4.2e-17 62.2 13.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF18692 - 0.0015 18.3 0.5 0.0052 16.6 0.5 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF18692 - 0.0065 16.9 0.1 0.014 15.8 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_10 PF14788.6 ORF18692 - 0.11 12.4 0.1 0.31 10.9 0.1 1.7 2 0 0 2 2 2 0 EF hand DUF1116 PF06545.11 ORF111634 - 3.4e-99 330.6 1.0 4.6e-99 330.2 1.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1116) PhetRS_B1 PF18262.1 ORF107302 - 0.016 15.4 0.3 0.031 14.5 0.3 1.5 1 0 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain Peptidase_M41 PF01434.18 ORF104995 - 7.3e-62 208.6 0.0 1.3e-61 207.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 ORF104995 - 1.4e-26 93.5 0.6 2e-25 89.8 0.0 2.7 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF104995 - 1.3e-08 34.5 0.0 3.6e-08 33.1 0.0 1.8 1 0 0 1 1 1 1 AAA+ lid domain SAC3 PF12209.8 ORF104995 - 0.011 15.9 0.6 0.011 15.9 0.6 1.9 2 0 0 2 2 2 0 Leucine permease transcriptional regulator helical domain ECM1 PF05782.11 ORF104995 - 0.24 10.3 2.5 0.34 9.8 2.5 1.1 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) Band_7 PF01145.25 ORF104943 - 9e-30 104.0 1.5 1e-29 103.8 0.6 1.5 1 1 0 1 1 1 1 SPFH domain / Band 7 family HflK_N PF12221.8 ORF104943 - 2.2e-15 56.4 13.5 6.3e-15 54.9 13.5 1.9 1 0 0 1 1 1 1 Bacterial membrane protein N terminal DivIVA PF05103.13 ORF104943 - 0.081 13.0 2.5 0.14 12.2 2.5 1.4 1 0 0 1 1 1 0 DivIVA protein SCAB_CC PF16712.5 ORF104943 - 0.095 12.5 0.4 0.17 11.7 0.4 1.3 1 0 0 1 1 1 0 Coiled-coil regions of plant-specific actin-binding protein GHMP_kinases_C PF08544.13 ORF104943 - 0.23 11.9 0.9 0.71 10.3 0.9 1.8 1 0 0 1 1 1 0 GHMP kinases C terminal cNMP_binding PF00027.29 ORF104488 - 4.2e-41 138.9 0.0 9.2e-21 73.7 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Cupin_2 PF07883.11 ORF104488 - 0.013 15.2 0.0 0.072 12.8 0.0 2.0 2 0 0 2 2 2 0 Cupin domain Vasculin PF15337.6 ORF104488 - 0.15 13.0 4.7 0.43 11.4 4.7 1.8 1 0 0 1 1 1 0 Vascular protein family Vasculin-like 1 DUF3245 PF11595.8 ORF104488 - 0.23 11.9 5.8 0.59 10.6 5.8 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3245) Peptidase_C13 PF01650.18 ORF99356 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family GTP_cyclohydro2 PF00925.20 ORF99055 - 1.1e-18 67.4 0.0 1.6e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 GTP cyclohydrolase II GTP_CH_N PF12471.8 ORF99055 - 3.3e-12 46.5 0.1 1.3e-11 44.6 0.1 1.9 1 1 0 1 1 1 1 GTP cyclohydrolase N terminal DUF5608 PF18356.1 ORF99055 - 0.085 12.9 0.1 1.7 8.7 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5608) GlcNAc_2-epim PF07221.11 ORF87295 - 5.3e-132 440.2 12.9 6.9e-132 439.9 12.9 1.0 1 0 0 1 1 1 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Glyco_hydro_47 PF01532.20 ORF87295 - 0.11 11.4 3.9 0.82 8.5 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 47 Peptidase_C13 PF01650.18 ORF8588 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family FUSC PF04632.12 ORF8400 - 0.19 10.2 3.7 0.45 9.0 3.7 1.5 1 0 0 1 1 1 0 Fusaric acid resistance protein family Spc7 PF08317.11 ORF8400 - 0.93 8.3 11.6 0.1 11.5 4.6 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein Iso_dh PF00180.20 ORF83043 - 1.8e-73 247.7 0.0 2e-73 247.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Phe_ZIP PF08916.11 ORF83043 - 0.032 15.0 0.4 0.15 12.8 0.1 2.2 2 0 0 2 2 2 0 Phenylalanine zipper Abhydro_lipase PF04083.16 ORF81430 - 8.4e-19 66.9 0.0 1.6e-18 66.0 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF81430 - 1.4e-11 44.5 0.2 2.5e-11 43.7 0.2 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold Tubulin_C PF03953.17 ORF8102 - 2.1e-51 173.4 0.2 3.9e-51 172.5 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF8102 - 5.3e-51 173.6 0.0 7.4e-51 173.1 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 ORF8102 - 0.032 13.9 0.0 0.058 13.1 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Ank_2 PF12796.7 ORF79042 - 6.9e-11 42.6 0.0 1.4e-06 28.8 0.0 2.2 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF79042 - 4.5e-07 30.3 0.0 0.00017 22.1 0.0 2.9 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF79042 - 6.8e-07 29.4 0.5 1.5e-05 25.2 0.0 2.6 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF79042 - 0.00011 22.3 0.0 0.056 14.0 0.0 2.7 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 ORF79042 - 0.00063 20.1 0.0 0.094 13.2 0.0 2.6 2 0 0 2 2 2 1 Ankyrin repeat RNase_Zc3h12a PF11977.8 ORF79042 - 0.00094 19.0 0.0 0.0017 18.2 0.0 1.3 1 0 0 1 1 1 1 Zc3h12a-like Ribonuclease NYN domain SopE_GEF PF07487.13 ORF79042 - 0.017 15.2 0.0 0.031 14.4 0.0 1.4 1 0 0 1 1 1 0 SopE GEF domain DUF4219 PF13961.6 ORF79042 - 0.86 9.3 2.2 6.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4219) Ank_2 PF12796.7 ORF76332 - 4.6e-23 81.6 0.6 2.7e-14 53.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF76332 - 1.4e-20 73.0 5.9 1.8e-06 28.1 0.1 5.3 1 1 4 5 5 5 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF76332 - 1.8e-20 73.0 4.0 1.6e-07 31.7 0.1 4.0 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF76332 - 5.1e-17 60.2 3.0 0.009 16.5 0.0 5.6 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF76332 - 1.8e-14 53.4 7.8 0.0033 17.8 0.2 5.4 5 0 0 5 5 5 3 Ankyrin repeat Glycos_transf_1 PF00534.20 ORF76332 - 4.1e-07 29.7 0.2 8.1e-07 28.7 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF76332 - 1.8e-06 28.4 0.2 4.9e-06 27.0 0.2 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 KIAA1430 PF13879.6 ORF69334 - 2.4e-26 92.4 11.8 2.4e-26 92.4 11.8 3.6 3 1 0 3 3 3 1 KIAA1430 homologue WhiA_N PF10298.9 ORF69334 - 1.2 9.3 3.9 4.1 7.5 0.3 3.0 3 0 0 3 3 3 0 WhiA N-terminal LAGLIDADG-like domain Iso_dh PF00180.20 ORF65778 - 1.8e-73 247.7 0.0 2e-73 247.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Phe_ZIP PF08916.11 ORF65778 - 0.032 15.0 0.4 0.15 12.8 0.1 2.2 2 0 0 2 2 2 0 Phenylalanine zipper Peptidase_C13 PF01650.18 ORF64523 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family Tubulin_C PF03953.17 ORF48122 - 2.1e-51 173.4 0.2 3.9e-51 172.5 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF48122 - 5.7e-51 173.5 0.0 8.5e-51 172.9 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 ORF48122 - 0.027 14.2 0.0 0.058 13.1 0.0 1.6 1 0 0 1 1 1 0 Tubulin domain GlcNAc_2-epim PF07221.11 ORF4809 - 5.3e-132 440.2 12.9 6.9e-132 439.9 12.9 1.0 1 0 0 1 1 1 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Glyco_hydro_47 PF01532.20 ORF4809 - 0.11 11.4 3.9 0.82 8.5 0.1 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 47 Glycos_transf_2 PF00535.26 ORF4081 - 0.0018 18.1 0.0 0.28 11.0 0.0 2.2 1 1 0 2 2 2 2 Glycosyl transferase family 2 Xan_ur_permease PF00860.20 ORF38093 - 1.2e-106 356.7 37.9 1.6e-106 356.3 37.9 1.2 1 0 0 1 1 1 1 Permease family SprB PF13573.6 ORF38093 - 0.032 14.0 0.3 0.066 13.0 0.3 1.5 1 0 0 1 1 1 0 SprB repeat CBP_BcsG PF11658.8 ORF38093 - 0.48 8.7 0.8 0.73 8.2 0.8 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG YtpI PF14007.6 ORF38093 - 0.95 9.6 6.7 0.81 9.9 0.7 3.0 2 0 0 2 2 2 0 YtpI-like protein Tubulin_C PF03953.17 ORF33284 - 2.1e-51 173.4 0.2 3.9e-51 172.5 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF33284 - 5.7e-51 173.5 0.0 8.5e-51 172.9 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 ORF33284 - 0.027 14.2 0.0 0.058 13.1 0.0 1.6 1 0 0 1 1 1 0 Tubulin domain TMEM154 PF15102.6 ORF32724 - 0.026 14.5 0.4 0.052 13.5 0.4 1.5 1 0 0 1 1 1 0 TMEM154 protein family DUF3290 PF11694.8 ORF32724 - 0.075 13.0 0.6 0.075 13.0 0.6 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3290) Cupin_8 PF13621.6 ORF32018 - 2.2e-21 76.8 0.0 4.4e-21 75.7 0.0 1.4 1 0 0 1 1 1 1 Cupin-like domain JmjC PF02373.22 ORF32018 - 1.3e-17 64.3 0.0 2.2e-17 63.5 0.0 1.4 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_4 PF08007.12 ORF32018 - 0.0051 16.3 0.0 0.019 14.5 0.0 1.9 1 1 0 1 1 1 1 Cupin superfamily protein Peptidase_C13 PF01650.18 ORF25081 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family Peptidase_C13 PF01650.18 ORF19276 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family MFS_1 PF07690.16 ORF17140 - 1.9e-38 132.3 69.7 9.7e-37 126.7 44.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF17140 - 1.5e-16 60.3 11.7 1.5e-16 60.3 11.7 2.3 1 1 1 2 2 2 1 Sugar (and other) transporter MFS_4 PF06779.14 ORF17140 - 2.8e-07 30.2 41.3 3.7e-07 29.8 41.3 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB P5-ATPase PF12409.8 ORF17140 - 0.093 12.8 6.2 4.4 7.4 1.2 2.6 2 0 0 2 2 2 0 P5-type ATPase cation transporter MFS_Mycoplasma PF07672.13 ORF17140 - 0.79 8.9 6.0 0.064 12.5 1.0 1.7 2 0 0 2 2 2 0 Mycoplasma MFS transporter MFS_1_like PF12832.7 ORF17140 - 2 7.2 15.3 1.2 7.9 3.5 2.3 2 0 0 2 2 2 0 MFS_1 like family ATPgrasp_N PF18130.1 ORF16126 - 1.6e-20 73.4 0.2 6.1e-20 71.6 0.2 2.0 1 0 0 1 1 1 1 ATP-grasp N-terminal domain ATP-grasp_4 PF13535.6 ORF16126 - 8.2e-20 71.0 0.0 6.9e-19 68.0 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 ORF16126 - 2.8e-11 43.7 0.0 5.1e-10 39.6 0.0 2.3 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 ORF16126 - 1e-09 38.2 0.0 0.0011 18.6 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.6 ORF16126 - 3.4e-09 36.5 0.0 1.6e-07 31.1 0.0 2.9 2 1 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.13 ORF16126 - 9e-09 35.2 0.1 0.0017 18.0 0.1 2.7 1 1 0 2 2 2 2 D-ala D-ala ligase C-terminus LAL_C2 PF18603.1 ORF16126 - 2.3e-05 24.5 0.2 8.3e-05 22.7 0.0 2.0 2 0 0 2 2 2 1 L-amino acid ligase C-terminal domain 2 ATP-grasp PF02222.22 ORF16126 - 3e-05 23.7 0.0 0.0078 15.8 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain GARS_A PF01071.19 ORF16126 - 0.00016 21.5 0.1 0.2 11.4 0.0 3.2 3 0 0 3 3 3 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.6 ORF16126 - 0.026 14.0 0.1 0.048 13.1 0.1 1.4 1 0 0 1 1 1 0 ATP-grasp domain RimK PF08443.11 ORF16126 - 0.032 13.8 0.0 0.2 11.2 0.0 2.2 2 0 0 2 2 2 0 RimK-like ATP-grasp domain Bestrophin PF01062.21 ORF13971 - 3.8e-25 88.9 0.6 5.5e-25 88.4 0.6 1.2 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF2615 PF11027.8 ORF13249 - 0.12 12.5 1.0 0.28 11.4 1.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) PP2C PF00481.21 ORF109469 - 3.3e-43 148.2 0.0 6e-43 147.3 0.0 1.4 1 0 0 1 1 1 1 Protein phosphatase 2C ubiquitin PF00240.23 ORF109469 - 9.4e-09 34.9 2.2 2.2e-08 33.7 2.2 1.5 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF109469 - 0.0015 18.3 0.6 0.0031 17.3 0.6 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF109469 - 0.14 12.5 1.1 0.4 11.1 0.2 2.1 2 0 0 2 2 2 0 Ubiquitin-like domain Tubulin_C PF03953.17 ORF106798 - 2.1e-51 173.4 0.2 3.9e-51 172.5 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF106798 - 5.7e-51 173.5 0.0 8.5e-51 172.9 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 ORF106798 - 0.032 13.9 0.0 0.058 13.1 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Hist_deacetyl PF00850.19 ORF104062 - 2.6e-19 69.8 0.0 3.6e-19 69.4 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Nucleos_tra2_C PF07662.13 NODE_12514_length_1249_cov_3.734761_g9351_i0forward_frame_1 - 4.6e-58 196.5 11.3 4.6e-58 196.5 11.3 2.2 2 1 0 2 2 2 1 Na+ dependent nucleoside transporter C-terminus Nucleos_tra2_N PF01773.20 NODE_12514_length_1249_cov_3.734761_g9351_i0forward_frame_1 - 1e-20 74.1 4.2 1e-20 74.1 4.2 4.0 3 1 1 4 4 4 1 Na+ dependent nucleoside transporter N-terminus Gate PF07670.14 NODE_12514_length_1249_cov_3.734761_g9351_i0forward_frame_1 - 6.1e-07 29.7 4.4 6.1e-07 29.7 4.4 4.1 2 1 2 4 4 4 2 Nucleoside recognition PLAC8 PF04749.17 NODE_12514_length_1249_cov_3.734761_g9351_i0forward_frame_1 - 5.6 8.0 4.9 1.9 9.5 0.1 2.4 2 1 0 2 2 2 0 PLAC8 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks24.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks24.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks24.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks24.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:53:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Enoyl_reductase PF12241.8 NODE_58823_length_284_cov_1.670683_g50884_i0forward_frame_1 - 0.088 12.1 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Trans-2-enoyl-CoA reductase catalytic region DUF3454 PF11936.8 NODE_58819_length_284_cov_1.706827_g50880_i0forward_frame_1 - 0.033 14.6 6.2 0.044 14.2 6.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3454) Plk4_PB2 PF18409.1 NODE_58812_length_284_cov_1.955823_g50873_i0forward_frame_1 - 0.076 13.7 0.5 0.12 13.1 0.5 1.2 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 MarC PF01914.17 NODE_58805_length_284_cov_2.240964_g50866_i0reverse_frame_1 - 3.2e-11 43.0 0.2 3.9e-11 42.7 0.2 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein SAM_Exu PF18609.1 NODE_58805_length_284_cov_2.240964_g50866_i0reverse_frame_1 - 0.1 12.7 0.2 0.15 12.2 0.2 1.3 1 0 0 1 1 1 0 Exuperantia SAM-like domain 7TM_GPCR_Srt PF10321.9 NODE_58801_length_284_cov_2.325301_g50862_i0forward_frame_1 - 0.013 14.5 0.3 0.016 14.2 0.3 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt Jun PF03957.13 NODE_58797_length_284_cov_2.457831_g50858_i0reverse_frame_1 - 0.45 10.4 3.1 0.34 10.8 1.9 1.4 1 1 0 1 1 1 0 Jun-like transcription factor pKID PF02173.17 NODE_58793_length_284_cov_2.554217_g50854_i0forward_frame_1 - 0.12 11.9 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 pKID domain OTU PF02338.19 NODE_58782_length_284_cov_2.935743_g50843_i0forward_frame_1 - 1.7e-07 31.8 0.0 1.9e-07 31.7 0.0 1.0 1 0 0 1 1 1 1 OTU-like cysteine protease zf-IS66 PF13005.7 NODE_58780_length_284_cov_3.132530_g50841_i0reverse_frame_1 - 1.2 9.6 4.5 4.6 7.7 0.3 2.2 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 UCH PF00443.29 NODE_58776_length_284_cov_3.341365_g50837_i0reverse_frame_1 - 0.031 13.8 0.7 0.081 12.4 0.5 1.7 1 1 1 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase COPIIcoated_ERV PF07970.12 NODE_58776_length_284_cov_3.341365_g50837_i0forward_frame_1 - 1.4 8.7 5.8 1.8 8.4 5.8 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum vesicle transporter TTL PF03133.15 NODE_58768_length_284_cov_39.192771_g50829_i0forward_frame_1 - 0.014 14.6 0.3 0.019 14.1 0.3 1.1 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family KAR9 PF08580.10 NODE_58764_length_284_cov_45.285141_g50825_i0forward_frame_1 - 0.66 8.4 2.9 0.64 8.5 2.9 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 HAUS4 PF14735.6 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 0.019 14.7 1.9 0.023 14.4 1.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 4 Fmp27_WPPW PF10359.9 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 0.056 12.3 1.7 0.065 12.1 1.7 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain PRKG1_interact PF15898.5 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 0.082 13.8 3.0 0.11 13.4 3.0 1.2 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain CR6_interact PF10147.9 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 0.23 11.1 4.7 0.43 10.3 4.7 1.5 1 1 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 HalX PF08663.10 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 4.6 7.6 7.6 2.9 8.3 0.9 2.5 1 1 0 2 2 2 0 HalX domain Orbi_NS3 PF01616.16 NODE_58754_length_284_cov_75.281124_g50815_i0forward_frame_1 - 0.023 14.4 0.1 0.027 14.2 0.1 1.1 1 0 0 1 1 1 0 Orbivirus NS3 Caveolin PF01146.17 NODE_58750_length_284_cov_80.445783_g50811_i0reverse_frame_1 - 0.34 10.9 3.4 0.42 10.6 3.4 1.1 1 0 0 1 1 1 0 Caveolin DUF3997 PF13162.6 NODE_58747_length_284_cov_93.751004_g50808_i0forward_frame_1 - 0.097 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3997) DUF4027 PF13219.6 NODE_58744_length_284_cov_107.192771_g50805_i0forward_frame_1 - 0.053 13.4 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4027) DUF5590 PF17881.1 NODE_58742_length_284_cov_122.562249_g50803_i0reverse_frame_1 - 0.096 12.8 0.1 0.73 10.0 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5590) Med13_N PF11597.8 NODE_58741_length_284_cov_165.285141_g50802_i0forward_frame_1 - 0.061 12.7 0.2 0.065 12.6 0.2 1.0 1 0 0 1 1 1 0 Mediator complex subunit 13 N-terminal DUF2043 PF09740.9 NODE_58739_length_284_cov_172.168675_g50800_i0forward_frame_1 - 0.029 15.1 1.6 0.049 14.3 1.6 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2043) Corona_NS2 PF04753.12 NODE_58739_length_284_cov_172.168675_g50800_i0forward_frame_1 - 0.12 12.9 0.0 0.15 12.7 0.0 1.2 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 DUF5579 PF17742.1 NODE_58733_length_284_cov_237.887550_g50794_i0forward_frame_1 - 0.048 13.2 0.3 0.053 13.1 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5579) GCS2 PF04107.13 NODE_58732_length_284_cov_300.425703_g50793_i0reverse_frame_1 - 0.059 12.7 0.2 0.067 12.5 0.2 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) CA_like PF10563.9 NODE_58730_length_284_cov_12723.112450_g50791_i0forward_frame_1 - 0.057 13.3 0.0 0.058 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative carbonic anhydrase 5_nucleotid PF05761.14 NODE_58728_length_285_cov_1.248000_g50789_i0forward_frame_1 - 7.7e-08 31.7 0.0 8.4e-08 31.5 0.0 1.0 1 0 0 1 1 1 1 5' nucleotidase family Mrx7 PF10906.8 NODE_58702_length_285_cov_1.768000_g50763_i0reverse_frame_1 - 0.11 12.7 0.1 0.2 11.9 0.1 1.6 1 1 0 1 1 1 0 MIOREX complex component 7 LCCL PF03815.19 NODE_58699_length_285_cov_1.800000_g50760_i0reverse_frame_1 - 0.11 12.6 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 LCCL domain PfaD_N PF18328.1 NODE_58698_length_285_cov_1.856000_g50759_i0forward_frame_1 - 0.12 12.3 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Fatty acid synthase subunit PfaD N-terminal domain DUF3754 PF12576.8 NODE_58693_length_285_cov_1.912000_g50754_i0forward_frame_1 - 0.029 14.3 0.1 0.038 13.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3754) ResIII PF04851.15 NODE_58685_length_285_cov_2.024000_g50746_i0reverse_frame_1 - 5.1e-05 23.3 0.0 5.8e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Kinesin PF00225.23 NODE_58685_length_285_cov_2.024000_g50746_i0reverse_frame_1 - 0.03 13.3 0.0 0.03 13.2 0.0 1.1 1 0 0 1 1 1 0 Kinesin motor domain Microtub_bd PF16796.5 NODE_58685_length_285_cov_2.024000_g50746_i0reverse_frame_1 - 0.048 13.6 0.1 0.058 13.3 0.1 1.4 1 1 0 1 1 1 0 Microtubule binding DUF87 PF01935.17 NODE_58685_length_285_cov_2.024000_g50746_i0reverse_frame_1 - 0.07 13.2 0.0 0.098 12.7 0.0 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_30 PF13604.6 NODE_58685_length_285_cov_2.024000_g50746_i0reverse_frame_1 - 0.12 12.1 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 NODE_58685_length_285_cov_2.024000_g50746_i0reverse_frame_1 - 0.17 11.2 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_7 PF12775.7 NODE_58685_length_285_cov_2.024000_g50746_i0reverse_frame_1 - 0.19 11.2 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region SelR PF01641.18 NODE_58680_length_285_cov_2.080000_g50741_i0forward_frame_1 - 1.4e-38 131.7 0.0 1.5e-38 131.5 0.0 1.0 1 0 0 1 1 1 1 SelR domain Ribosomal_L37e PF01907.19 NODE_58680_length_285_cov_2.080000_g50741_i0forward_frame_1 - 0.18 12.0 0.2 0.18 12.0 0.2 1.8 2 0 0 2 2 2 0 Ribosomal protein L37e Osmo_CC PF08946.10 NODE_58678_length_285_cov_2.112000_g50739_i0reverse_frame_1 - 0.57 10.5 3.8 15 5.9 0.1 3.0 3 0 0 3 3 3 0 Osmosensory transporter coiled coil LPD23 PF18838.1 NODE_58678_length_285_cov_2.112000_g50739_i0reverse_frame_1 - 0.9 9.4 2.9 14 5.6 0.2 2.1 1 1 1 2 2 2 0 Large polyvalent protein associated domain 23 DUF1177 PF06675.11 NODE_58669_length_285_cov_2.356000_g50730_i0forward_frame_1 - 0.093 11.5 0.0 0.11 11.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1177) Strep_his_triad PF04270.13 NODE_58665_length_285_cov_2.484000_g50726_i0reverse_frame_1 - 0.018 15.0 0.2 0.034 14.2 0.2 1.4 1 0 0 1 1 1 0 Streptococcal histidine triad protein Phe_tRNA-synt_N PF02912.18 NODE_58663_length_285_cov_2.572000_g50724_i0reverse_frame_1 - 0.00046 20.1 0.1 0.0013 18.6 0.0 1.8 2 0 0 2 2 2 1 Aminoacyl tRNA synthetase class II, N-terminal domain DUF4712 PF15830.5 NODE_58662_length_285_cov_2.580000_g50723_i0reverse_frame_1 - 0.062 13.0 0.2 0.069 12.8 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4712) Spatacsin_C PF14649.6 NODE_58661_length_285_cov_2.640000_g50722_i0reverse_frame_1 - 0.033 13.3 0.0 0.035 13.2 0.0 1.1 1 0 0 1 1 1 0 Spatacsin C-terminus DUF952 PF06108.12 NODE_58660_length_285_cov_2.660000_g50721_i0reverse_frame_1 - 0.14 12.1 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF952) Rot1 PF10681.9 NODE_58657_length_285_cov_2.796000_g50718_i0forward_frame_1 - 0.11 12.0 0.6 0.13 11.8 0.6 1.1 1 0 0 1 1 1 0 Chaperone for protein-folding within the ER, fungal DUF4375 PF14300.6 NODE_58657_length_285_cov_2.796000_g50718_i0forward_frame_1 - 0.14 12.4 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4375) Co_AT_N PF12557.8 NODE_58656_length_285_cov_2.820000_g50717_i0reverse_frame_1 - 4.1 7.4 9.7 0.44 10.5 4.6 2.1 2 0 0 2 2 2 0 Cob(I)alamin adenosyltransferase N terminal SLAC1 PF03595.17 NODE_58656_length_285_cov_2.820000_g50717_i0forward_frame_1 - 2.2e-06 27.2 8.0 2.2e-06 27.1 8.0 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel DUF4408 PF14364.6 NODE_58656_length_285_cov_2.820000_g50717_i0forward_frame_1 - 0.18 11.6 2.5 0.5 10.2 2.5 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4408) Pkinase PF00069.25 NODE_58655_length_285_cov_2.880000_g50716_i0forward_frame_1 - 1.9e-18 66.8 0.7 2.3e-18 66.5 0.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58655_length_285_cov_2.880000_g50716_i0forward_frame_1 - 9.5e-15 54.6 0.3 1.1e-14 54.3 0.3 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Inos-1-P_synth PF01658.17 NODE_58655_length_285_cov_2.880000_g50716_i0forward_frame_1 - 0.035 14.4 0.9 0.041 14.1 0.9 1.1 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase 2-oxoacid_dh PF00198.23 NODE_58648_length_285_cov_3.024000_g50709_i0reverse_frame_1 - 0.26 10.7 0.0 0.32 10.4 0.0 1.1 1 0 0 1 1 1 0 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HopA1 PF17914.1 NODE_58644_length_285_cov_3.124000_g50705_i0reverse_frame_1 - 0.024 14.4 0.0 0.028 14.2 0.0 1.0 1 0 0 1 1 1 0 HopA1 effector protein family TMEM72 PF16054.5 NODE_58639_length_285_cov_5.316000_g50700_i0forward_frame_1 - 0.11 12.2 1.4 0.11 12.1 1.4 1.1 1 0 0 1 1 1 0 Transmembrane protein family 72 HEPN_RnaseLS PF18869.1 NODE_58637_length_285_cov_12.992000_g50698_i0reverse_frame_1 - 0.056 13.6 0.3 0.063 13.4 0.3 1.1 1 0 0 1 1 1 0 RnaseLS-like HEPN DUF1189 PF06691.11 NODE_58636_length_285_cov_28.704000_g50697_i0forward_frame_1 - 3.5 7.1 15.8 4.1 6.9 15.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) TssN PF17555.2 NODE_58635_length_285_cov_31.572000_g50696_i0forward_frame_1 - 3.2 7.0 10.7 3.6 6.9 10.7 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssN Transp_Tc5_C PF04236.15 NODE_58628_length_285_cov_49.020000_g50689_i0forward_frame_1 - 0.03 14.7 1.3 0.04 14.3 1.3 1.3 1 0 0 1 1 1 0 Tc5 transposase C-terminal domain Histone_H2A_C PF16211.5 NODE_58618_length_285_cov_73.948000_g50679_i0reverse_frame_1 - 1.5 8.6 6.6 3 7.7 6.6 1.5 1 0 0 1 1 1 0 C-terminus of histone H2A hnRNP_Q_AcD PF18360.1 NODE_58616_length_285_cov_81.652000_g50677_i0reverse_frame_1 - 0.15 12.0 0.0 0.27 11.2 0.0 1.5 2 0 0 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain DUF5434 PF17502.2 NODE_58606_length_285_cov_121.996000_g50667_i0reverse_frame_1 - 0.087 12.8 1.0 0.11 12.5 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5434) DUF5318 PF17249.2 NODE_58596_length_285_cov_294.140000_g50657_i0reverse_frame_1 - 0.029 14.1 0.0 0.042 13.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5318) Herpes_BLLF1 PF05109.13 NODE_58594_length_285_cov_328.332000_g50655_i0reverse_frame_1 - 5e-06 24.8 40.3 5.4e-06 24.7 40.3 1.0 1 0 0 1 1 1 1 Herpes virus major outer envelope glycoprotein (BLLF1) Asp-B-Hydro_N PF05279.11 NODE_58594_length_285_cov_328.332000_g50655_i0reverse_frame_1 - 2.1 8.3 4.3 2.3 8.2 4.3 1.0 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DUF779 PF05610.11 NODE_58587_length_286_cov_1.123506_g50648_i0reverse_frame_3 - 0.051 13.8 0.0 0.065 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF779) ICEA PF05315.11 NODE_58587_length_286_cov_1.123506_g50648_i0reverse_frame_3 - 0.08 12.4 0.5 0.099 12.1 0.5 1.0 1 0 0 1 1 1 0 ICEA Protein Herpes_IE68 PF02479.16 NODE_58587_length_286_cov_1.123506_g50648_i0reverse_frame_3 - 0.11 12.1 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus immediate early protein Lamprin PF06403.11 NODE_58585_length_286_cov_1.163347_g50646_i0forward_frame_2 - 0.85 9.6 9.4 2.7 8.0 9.4 1.8 1 1 0 1 1 1 0 Lamprin Omega-toxin PF06357.11 NODE_58584_length_286_cov_1.223108_g50645_i0reverse_frame_2 - 0.13 12.1 3.2 0.27 11.1 3.2 1.5 1 0 0 1 1 1 0 Omega-atracotoxin FHA PF00498.26 NODE_58584_length_286_cov_1.223108_g50645_i0forward_frame_2 - 5.4e-09 36.3 0.3 8.7e-09 35.6 0.3 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_58584_length_286_cov_1.223108_g50645_i0forward_frame_2 - 5.5e-05 23.4 0.0 6.9e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Tash_PEST PF07708.11 NODE_58583_length_286_cov_1.239044_g50644_i0reverse_frame_3 - 0.21 11.8 0.7 0.32 11.2 0.7 1.3 1 0 0 1 1 1 0 Tash protein PEST motif AveC_like PF17198.4 NODE_58580_length_286_cov_1.270916_g50641_i0forward_frame_3 - 0.049 13.1 0.3 0.052 13.0 0.3 1.1 1 0 0 1 1 1 0 Spirocyclase AveC-like SGBP_B_XBD PF18329.1 NODE_58579_length_286_cov_1.274900_g50640_i0reverse_frame_2 - 0.032 14.2 0.1 0.032 14.2 0.1 1.2 1 0 0 1 1 1 0 Surface glycan-binding protein B xyloglucan binding domain Nramp PF01566.18 NODE_58578_length_286_cov_1.306773_g50639_i0forward_frame_3 - 2.7e-15 56.2 0.1 3e-15 56.1 0.1 1.0 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein DUF5527 PF17665.1 NODE_58576_length_286_cov_1.342629_g50637_i0reverse_frame_3 - 0.039 13.5 0.0 0.058 12.9 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5527) DUF1191 PF06697.12 NODE_58576_length_286_cov_1.342629_g50637_i0reverse_frame_3 - 0.2 11.4 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1191) HHH_8 PF14716.6 NODE_58575_length_286_cov_1.358566_g50636_i0forward_frame_3 - 0.065 13.6 0.3 0.14 12.5 0.4 1.5 2 0 0 2 2 2 0 Helix-hairpin-helix domain FAM75 PF14650.6 NODE_58575_length_286_cov_1.358566_g50636_i0forward_frame_2 - 0.035 13.6 0.3 0.043 13.4 0.3 1.1 1 0 0 1 1 1 0 FAM75 family HAD_SAK_1 PF10307.9 NODE_58571_length_286_cov_1.402390_g50632_i0forward_frame_2 - 0.0025 17.7 0.3 0.0029 17.4 0.3 1.0 1 0 0 1 1 1 1 HAD domain family 1 in Swiss Army Knife RNA repair proteins DUF1947 PF09183.10 NODE_58571_length_286_cov_1.402390_g50632_i0forward_frame_2 - 0.019 15.2 0.7 0.34 11.3 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) NADH_u_ox_C PF12853.7 NODE_58569_length_286_cov_1.442231_g50630_i0reverse_frame_3 - 0.034 14.1 0.2 0.036 14.1 0.2 1.2 1 0 0 1 1 1 0 C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit DUF1889 PF08986.10 NODE_58569_length_286_cov_1.442231_g50630_i0reverse_frame_2 - 0.033 14.6 0.0 0.038 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) zf-UBR PF02207.20 NODE_58568_length_286_cov_1.494024_g50629_i0reverse_frame_2 - 0.16 12.1 5.5 0.22 11.7 5.5 1.4 1 1 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) Ion_trans_2 PF07885.16 NODE_58561_length_286_cov_1.617530_g50622_i0reverse_frame_3 - 0.011 15.6 1.3 0.014 15.4 1.3 1.2 1 0 0 1 1 1 0 Ion channel RSN1_7TM PF02714.15 NODE_58561_length_286_cov_1.617530_g50622_i0reverse_frame_2 - 0.035 13.4 5.0 0.018 14.4 3.2 1.4 1 1 1 2 2 2 0 Calcium-dependent channel, 7TM region, putative phosphate Sec10 PF07393.11 NODE_58559_length_286_cov_1.752988_g50620_i0forward_frame_3 - 0.067 11.6 0.1 0.072 11.5 0.1 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec10 DUF2637 PF10935.8 NODE_58559_length_286_cov_1.752988_g50620_i0forward_frame_2 - 0.16 11.9 0.1 0.16 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2637) CBP4 PF07960.11 NODE_58558_length_286_cov_1.776892_g50619_i0reverse_frame_3 - 0.01 15.7 4.0 0.013 15.4 4.0 1.1 1 0 0 1 1 1 0 CBP4 DUF2828 PF11443.8 NODE_58557_length_286_cov_1.836653_g50618_i0forward_frame_3 - 0.0024 16.1 0.2 0.0025 16.0 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2828) DUF678 PF05077.12 NODE_58557_length_286_cov_1.836653_g50618_i0forward_frame_3 - 0.1 12.7 3.4 0.13 12.4 3.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF678) Rz1 PF06085.11 NODE_58556_length_286_cov_1.860558_g50617_i0forward_frame_2 - 0.035 13.9 0.1 0.049 13.4 0.1 1.3 1 0 0 1 1 1 0 Lipoprotein Rz1 precursor SHOCT PF09851.9 NODE_58553_length_286_cov_1.956175_g50614_i0forward_frame_2 - 0.016 14.9 0.2 0.054 13.2 0.1 2.0 2 0 0 2 2 2 0 Short C-terminal domain Baculo_RING PF05883.11 NODE_58553_length_286_cov_1.956175_g50614_i0forward_frame_2 - 0.084 12.9 0.7 0.09 12.8 0.7 1.1 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain DndB PF14072.6 NODE_58551_length_286_cov_1.972112_g50612_i0reverse_frame_3 - 0.099 11.8 0.1 0.099 11.8 0.1 1.1 1 0 0 1 1 1 0 DNA-sulfur modification-associated SBF2 PF12335.8 NODE_58551_length_286_cov_1.972112_g50612_i0forward_frame_3 - 0.00064 19.4 0.2 0.00064 19.4 0.2 1.1 1 0 0 1 1 1 1 Myotubularin protein Biotin_lipoyl_2 PF13533.6 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 3.1e-08 33.3 2.2 5.4e-08 32.5 1.4 1.7 1 1 1 2 2 2 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 0.0011 18.8 0.5 0.0022 17.8 0.4 1.4 1 1 0 1 1 1 1 Biotin-requiring enzyme HlyD_D23 PF16576.5 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 0.004 16.4 0.1 0.0046 16.2 0.1 1.1 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 0.015 16.0 0.2 0.024 15.4 0.1 1.4 2 0 0 2 2 2 0 HlyD family secretion protein PASTA PF03793.19 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 0.038 13.8 1.2 0.056 13.3 1.2 1.4 1 1 0 1 1 1 0 PASTA domain SplA PF11132.8 NODE_58549_length_286_cov_2.007968_g50610_i0forward_frame_2 - 0.12 12.1 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator protein (SplA) DUF1891 PF09004.10 NODE_58541_length_286_cov_2.191235_g50602_i0forward_frame_3 - 0.081 12.5 1.1 0.081 12.5 1.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1891) LZ_Tnp_IS66 PF13007.7 NODE_58540_length_286_cov_2.203187_g50601_i0forward_frame_3 - 0.071 13.9 1.6 0.14 13.0 1.6 1.4 1 0 0 1 1 1 0 Transposase C of IS166 homeodomain DUF2303 PF10065.9 NODE_58538_length_286_cov_2.215139_g50599_i0forward_frame_2 - 0.073 12.2 0.3 0.081 12.1 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) AI-2E_transport PF01594.16 NODE_58535_length_286_cov_2.342629_g50596_i0forward_frame_3 - 4.5e-18 65.5 5.2 5e-18 65.3 5.2 1.0 1 0 0 1 1 1 1 AI-2E family transporter FA_desaturase PF00487.24 NODE_58535_length_286_cov_2.342629_g50596_i0forward_frame_3 - 1.2 8.9 4.6 1.5 8.6 4.6 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2142 PF09913.9 NODE_58531_length_286_cov_2.410359_g50592_i0reverse_frame_2 - 0.03 13.2 0.1 0.035 13.0 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) DUF2625 PF10946.8 NODE_58531_length_286_cov_2.410359_g50592_i0forward_frame_3 - 1.7e-23 82.8 1.2 2e-23 82.5 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF2625 ABC_tran PF00005.27 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 2.6e-18 66.9 0.0 3e-18 66.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.00054 19.9 0.0 0.00059 19.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.001 18.9 0.0 0.0011 18.8 0.0 1.0 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.0012 18.6 1.5 0.0014 18.4 0.8 1.5 1 1 1 2 2 2 1 P-loop containing region of AAA domain AAA_5 PF07728.14 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.013 15.5 0.1 0.018 15.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) APS_kinase PF01583.20 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.015 15.2 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_16 PF13191.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.016 15.6 0.0 0.021 15.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.017 14.7 0.1 0.028 14.0 0.1 1.4 1 1 0 1 1 1 0 AAA domain Ploopntkinase3 PF18751.1 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.021 14.8 0.0 0.025 14.5 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 Zeta_toxin PF06414.12 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.036 13.3 0.0 0.037 13.3 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin AAA_13 PF13166.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.037 12.7 0.0 0.037 12.7 0.0 1.0 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.048 14.2 0.1 0.055 14.0 0.1 1.1 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.055 12.8 0.0 0.061 12.7 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Ploopntkinase1 PF18748.1 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.057 12.9 0.0 0.07 12.6 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase1 AAA_33 PF13671.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.085 13.0 0.0 0.091 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.14 12.4 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.16 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase NACHT PF05729.12 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.17 11.8 0.1 0.23 11.4 0.1 1.3 1 0 0 1 1 1 0 NACHT domain Thymidylate_kin PF02223.17 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.23 11.1 0.0 0.29 10.8 0.0 1.1 1 0 0 1 1 1 0 Thymidylate kinase G-alpha PF00503.20 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.26 10.4 0.0 0.27 10.3 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_30 PF13604.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.27 10.9 0.0 0.33 10.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain CotJB PF12652.7 NODE_58527_length_286_cov_2.673307_g50588_i0forward_frame_3 - 0.044 14.0 0.5 0.054 13.7 0.5 1.2 1 0 0 1 1 1 0 CotJB protein UN_NPL4 PF11543.8 NODE_58526_length_286_cov_2.693227_g50587_i0reverse_frame_2 - 1.2e-05 25.6 0.0 1.6e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Nuclear pore localisation protein NPL4 E1_UFD PF09358.10 NODE_58526_length_286_cov_2.693227_g50587_i0reverse_frame_2 - 0.003 18.2 0.0 0.0033 18.1 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin fold domain Ubiquitin_4 PF18036.1 NODE_58526_length_286_cov_2.693227_g50587_i0reverse_frame_2 - 0.15 12.1 0.5 0.65 10.1 0.5 2.0 1 1 0 1 1 1 0 Ubiquitin-like domain DUF4888 PF16229.5 NODE_58526_length_286_cov_2.693227_g50587_i0forward_frame_2 - 0.16 11.9 0.1 0.27 11.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4888) S_4TM PF18159.1 NODE_58526_length_286_cov_2.693227_g50587_i0forward_frame_2 - 1 8.6 3.4 1.1 8.4 3.4 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Rick_17kDa_Anti PF05433.15 NODE_58525_length_286_cov_2.697211_g50586_i0forward_frame_3 - 5.3e-05 23.0 3.6 7.9e-05 22.4 3.6 1.2 1 0 0 1 1 1 1 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 NODE_58525_length_286_cov_2.697211_g50586_i0forward_frame_3 - 0.0015 18.5 2.7 0.002 18.1 2.7 1.2 1 0 0 1 1 1 1 Glycine zipper Gly-zipper_YMGG PF13441.6 NODE_58525_length_286_cov_2.697211_g50586_i0forward_frame_3 - 0.0046 16.7 1.1 0.0059 16.3 1.1 1.1 1 0 0 1 1 1 1 YMGG-like Gly-zipper LapA_dom PF06305.11 NODE_58523_length_286_cov_2.808765_g50584_i0forward_frame_2 - 0.11 12.3 0.3 0.11 12.3 0.3 2.1 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain zf-C2H2 PF00096.26 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.00049 20.4 12.0 0.0042 17.5 0.2 2.8 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.00053 20.6 11.8 0.094 13.6 0.1 2.7 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.00065 20.0 0.1 0.00065 20.0 0.1 3.3 3 0 0 3 3 3 1 Zinc-finger double domain zf-met PF12874.7 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.0011 19.3 3.7 0.55 10.7 0.3 2.5 2 0 0 2 2 2 2 Zinc-finger of C2H2 type BolA PF01722.18 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.0056 16.9 0.2 0.0071 16.6 0.2 1.2 1 0 0 1 1 1 1 BolA-like protein Lustrin_cystein PF14625.6 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.049 14.0 1.1 0.12 12.8 0.5 2.0 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain zf-C2H2_jaz PF12171.8 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.061 13.6 6.9 0.63 10.4 0.8 2.6 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-H2C2_5 PF13909.6 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.11 12.2 0.6 0.11 12.2 0.6 3.2 4 0 0 4 4 4 0 C2H2-type zinc-finger domain MFS_1 PF07690.16 NODE_58517_length_286_cov_3.059761_g50578_i0reverse_frame_3 - 2.1e-07 30.2 2.6 2.5e-07 29.9 2.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 NODE_58517_length_286_cov_3.059761_g50578_i0reverse_frame_3 - 0.0023 16.9 1.4 0.0041 16.0 1.4 1.5 1 1 0 1 1 1 1 MFS_1 like family MFS_2 PF13347.6 NODE_58517_length_286_cov_3.059761_g50578_i0reverse_frame_3 - 0.027 13.0 5.1 0.032 12.8 5.1 1.0 1 0 0 1 1 1 0 MFS/sugar transport protein SUB1_ProdP9 PF18213.1 NODE_58513_length_286_cov_3.637450_g50574_i0forward_frame_3 - 0.11 12.3 0.9 0.16 11.8 0.8 1.3 1 1 0 1 1 1 0 SUB1 protease Prodomain ProdP9 LAGLIDADG_WhiA PF14527.6 NODE_58510_length_286_cov_4.426295_g50571_i0forward_frame_3 - 0.061 13.4 0.8 0.084 13.0 0.4 1.3 1 1 0 1 1 1 0 WhiA LAGLIDADG-like domain Cdc13_OB4_dimer PF18233.1 NODE_58505_length_286_cov_32.027888_g50566_i0forward_frame_2 - 0.063 13.4 0.1 0.094 12.9 0.1 1.3 1 0 0 1 1 1 0 Cdc13 OB4 dimerization domain Serpentine_r_xa PF03383.15 NODE_58502_length_286_cov_34.410359_g50563_i0forward_frame_3 - 0.44 10.5 5.5 0.53 10.3 5.5 1.1 1 0 0 1 1 1 0 Caenorhabditis serpentine receptor-like protein, class xa DHHC PF01529.20 NODE_58501_length_286_cov_37.398406_g50562_i0reverse_frame_3 - 0.048 13.8 0.7 0.057 13.5 0.7 1.0 1 0 0 1 1 1 0 DHHC palmitoyltransferase LapA_dom PF06305.11 NODE_58501_length_286_cov_37.398406_g50562_i0reverse_frame_3 - 0.17 11.8 2.3 0.6 10.0 0.5 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Grp7_allergen PF16984.5 NODE_58500_length_286_cov_37.625498_g50561_i0forward_frame_2 - 0.053 13.6 1.2 0.058 13.4 1.2 1.2 1 0 0 1 1 1 0 Group 7 allergen Piezo_RRas_bdg PF12166.8 NODE_58494_length_286_cov_53.039841_g50555_i0reverse_frame_2 - 1.3e-18 67.5 0.3 1.4e-18 67.4 0.3 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF4993 PF16384.5 NODE_58492_length_286_cov_55.330677_g50553_i0forward_frame_2 - 0.014 14.4 0.1 0.016 14.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function Aminotran_5 PF00266.19 NODE_58487_length_286_cov_60.884462_g50548_i0reverse_frame_2 - 0.26 10.2 0.0 0.31 10.0 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class-V Exog_C PF18026.1 NODE_58487_length_286_cov_60.884462_g50548_i0forward_frame_2 - 0.048 13.7 0.1 0.14 12.2 0.0 1.8 2 0 0 2 2 2 0 Endo/exonuclease (EXOG) C-terminal domain zf-RING_2 PF13639.6 NODE_58485_length_286_cov_62.565737_g50546_i0reverse_frame_3 - 0.16 12.3 4.5 0.25 11.7 4.5 1.4 1 0 0 1 1 1 0 Ring finger domain Acid_PPase PF12689.7 NODE_58484_length_286_cov_63.673307_g50545_i0forward_frame_3 - 6.6e-09 35.8 0.0 7.9e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 Acid Phosphatase LpxD PF04613.14 NODE_58484_length_286_cov_63.673307_g50545_i0forward_frame_3 - 0.1 12.4 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD UPA PF17217.3 NODE_58482_length_286_cov_69.007968_g50543_i0reverse_frame_2 - 0.032 14.1 0.3 0.038 13.9 0.3 1.0 1 0 0 1 1 1 0 UPA domain YafO_toxin PF13957.6 NODE_58482_length_286_cov_69.007968_g50543_i0forward_frame_3 - 0.059 13.4 0.1 0.072 13.1 0.1 1.1 1 0 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system Nodulin_late PF07127.11 NODE_58479_length_286_cov_79.107570_g50540_i0forward_frame_3 - 0.51 10.7 0.1 0.51 10.7 0.1 2.1 2 0 0 2 2 2 0 Late nodulin protein Transposase_24 PF03004.14 NODE_58469_length_286_cov_112.788845_g50530_i0forward_frame_3 - 0.0099 16.0 3.8 0.017 15.2 3.6 1.6 1 1 0 1 1 1 1 Plant transposase (Ptta/En/Spm family) I-EGF_1 PF18372.1 NODE_58467_length_286_cov_124.438247_g50528_i0forward_frame_2 - 0.036 14.2 0.2 0.052 13.7 0.2 1.2 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 YMF19 PF02326.15 NODE_58466_length_286_cov_125.872510_g50527_i0forward_frame_2 - 0.27 12.0 3.3 0.3 11.9 3.2 1.3 1 1 0 1 1 1 0 Plant ATP synthase F0 RTC PF01137.21 NODE_58465_length_286_cov_129.286853_g50526_i0reverse_frame_3 - 0.096 11.9 0.0 0.11 11.6 0.0 1.0 1 0 0 1 1 1 0 RNA 3'-terminal phosphate cyclase zf-rbx1 PF12678.7 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 2.7e-06 27.6 1.0 3.8e-06 27.1 1.0 1.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 8.7e-06 26.0 1.4 1.6e-05 25.1 1.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 1.3e-05 24.9 2.3 1.8e-05 24.5 1.6 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 7.6e-05 22.6 1.3 0.00011 22.0 1.3 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.00087 19.0 1.6 0.025 14.3 0.2 2.3 2 0 0 2 2 2 1 RING-like zinc finger Zn-ribbon_8 PF09723.10 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.014 15.5 0.4 0.021 14.9 0.4 1.4 1 0 0 1 1 1 0 Zinc ribbon domain zf-ANAPC11 PF12861.7 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.03 14.4 1.0 0.067 13.3 1.0 1.6 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.05 13.5 2.1 0.084 12.8 2.1 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.079 12.8 1.8 0.12 12.2 1.8 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Prok-RING_4 PF14447.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.082 12.8 2.4 0.19 11.6 2.4 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.11 12.6 3.7 1.6 8.9 0.0 2.4 2 0 0 2 2 2 0 RING-type zinc-finger zf-C3HC4_3 PF13920.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.26 11.2 3.0 0.73 9.7 3.0 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) UPF0547 PF10571.9 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 6.8 6.9 7.0 26 5.0 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 SNAPc_SNAP43 PF09808.9 NODE_58464_length_286_cov_130.609562_g50525_i0forward_frame_2 - 0.0053 16.7 2.1 0.0053 16.7 2.1 1.1 1 0 0 1 1 1 1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 Sigma_reg_N PF13800.6 NODE_58463_length_286_cov_223.055777_g50524_i0forward_frame_3 - 2 8.8 7.1 0.26 11.6 1.8 1.9 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF2633 PF11119.8 NODE_58463_length_286_cov_223.055777_g50524_i0forward_frame_2 - 1.1 9.2 3.9 2 8.4 3.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Urotensin_II PF02083.15 NODE_58462_length_286_cov_229.290837_g50523_i0reverse_frame_3 - 0.049 13.3 1.0 0.15 11.8 1.0 1.8 1 0 0 1 1 1 0 Urotensin II DUF3287 PF11690.8 NODE_58461_length_286_cov_257.430279_g50522_i0forward_frame_2 - 0.12 12.1 0.3 0.16 11.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) DUF2012 PF09430.10 NODE_58453_length_286_cov_1214.832669_g50514_i0reverse_frame_3 - 8.3e-05 22.7 0.0 0.0001 22.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2012) Y_Y_Y PF07495.13 NODE_58453_length_286_cov_1214.832669_g50514_i0reverse_frame_3 - 0.012 15.6 0.1 0.018 15.0 0.1 1.3 1 0 0 1 1 1 0 Y_Y_Y domain CarboxypepD_reg PF13620.6 NODE_58453_length_286_cov_1214.832669_g50514_i0reverse_frame_3 - 0.056 13.7 0.0 0.086 13.1 0.0 1.4 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain SCIMP PF15050.6 NODE_58452_length_286_cov_2023.458167_g50513_i0forward_frame_3 - 0.21 12.1 0.2 0.32 11.4 0.2 1.3 1 0 0 1 1 1 0 SCIMP protein UNC119_bdg PF15435.6 NODE_58451_length_286_cov_5387.852590_g50512_i0reverse_frame_3 - 0.0032 17.0 0.2 0.0038 16.8 0.2 1.1 1 0 0 1 1 1 1 UNC119-binding protein C5orf30 homologue Glyco_transf_20 PF00982.21 NODE_58450_length_286_cov_125968.633466_g50511_i0forward_frame_2 - 6.4 5.3 6.8 7.8 5.0 6.8 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 LRR_5 PF13306.6 NODE_58447_length_287_cov_1.166667_g50508_i0forward_frame_3 - 0.025 14.5 2.4 0.036 14.0 2.4 1.4 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) TMEM154 PF15102.6 NODE_58445_length_287_cov_1.246032_g50506_i0reverse_frame_2 - 0.5 10.3 2.7 0.8 9.6 2.7 1.3 1 0 0 1 1 1 0 TMEM154 protein family DUF3446 PF11928.8 NODE_58441_length_287_cov_1.269841_g50502_i0reverse_frame_3 - 0.011 16.1 0.0 0.012 15.9 0.0 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain zf-C2H2_3rep PF18868.1 NODE_58439_length_287_cov_1.289683_g50500_i0reverse_frame_3 - 0.0054 17.4 0.1 0.0064 17.2 0.1 1.2 1 0 0 1 1 1 1 Zinc finger C2H2-type, 3 repeats Mtp PF03821.16 NODE_58436_length_287_cov_1.408730_g50497_i0forward_frame_3 - 0.03 13.9 0.1 0.034 13.8 0.1 1.1 1 0 0 1 1 1 0 Golgi 4-transmembrane spanning transporter DUF2069 PF09842.9 NODE_58432_length_287_cov_1.492063_g50493_i0reverse_frame_3 - 0.044 14.0 0.6 0.051 13.8 0.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2069) Peptidase_S78 PF04586.17 NODE_58432_length_287_cov_1.492063_g50493_i0reverse_frame_2 - 0.099 12.8 0.1 0.13 12.5 0.1 1.2 1 0 0 1 1 1 0 Caudovirus prohead serine protease RINGv PF12906.7 NODE_58429_length_287_cov_1.559524_g50490_i0reverse_frame_2 - 0.0084 16.2 2.1 0.0084 16.2 2.1 2.0 2 0 0 2 2 2 1 RING-variant domain DUF1366 PF07104.11 NODE_58427_length_287_cov_1.630952_g50488_i0reverse_frame_2 - 0.18 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1366) DnaJ PF00226.31 NODE_58427_length_287_cov_1.630952_g50488_i0forward_frame_3 - 5.9e-05 23.1 0.4 9.1e-05 22.5 0.4 1.3 1 0 0 1 1 1 1 DnaJ domain DnaJ PF00226.31 NODE_58427_length_287_cov_1.630952_g50488_i0forward_frame_2 - 5.1e-07 29.7 0.3 7.5e-07 29.2 0.3 1.2 1 0 0 1 1 1 1 DnaJ domain Mto2_bdg PF12808.7 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.0022 18.2 1.7 0.0045 17.2 1.7 1.5 1 0 0 1 1 1 1 Micro-tubular organiser Mto1 C-term Mto2-binding region DUF4763 PF15960.5 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.0041 16.5 4.3 0.0047 16.3 4.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) TolA_bind_tri PF16331.5 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.0098 16.0 4.0 0.014 15.5 4.0 1.3 1 0 0 1 1 1 1 TolA binding protein trimerisation ATG16 PF08614.11 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.011 15.9 2.0 0.011 15.9 2.0 1.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) MCC-bdg_PDZ PF10506.9 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.023 14.7 3.2 0.12 12.4 1.5 2.0 1 1 1 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Ta0938 PF11494.8 NODE_58418_length_287_cov_1.845238_g50479_i0forward_frame_3 - 0.034 14.4 0.6 0.039 14.2 0.6 1.0 1 0 0 1 1 1 0 Ta0938 CPBP PF02517.16 NODE_58417_length_287_cov_1.853175_g50478_i0forward_frame_2 - 0.0025 18.2 0.5 0.003 17.9 0.5 1.2 1 0 0 1 1 1 1 CPBP intramembrane metalloprotease CybS PF05328.12 NODE_58416_length_287_cov_1.853175_g50477_i0reverse_frame_2 - 0.016 14.8 1.5 0.018 14.8 1.5 1.2 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit Ion_trans PF00520.31 NODE_58413_length_287_cov_2.003968_g50474_i0reverse_frame_2 - 4e-07 29.5 0.7 4.8e-07 29.2 0.7 1.1 1 0 0 1 1 1 1 Ion transport protein MatE PF01554.18 NODE_58411_length_287_cov_2.007937_g50472_i0forward_frame_3 - 7e-05 22.5 2.0 0.0001 22.0 2.0 1.3 1 0 0 1 1 1 1 MatE Oxidored_q5_N PF01059.17 NODE_58411_length_287_cov_2.007937_g50472_i0forward_frame_3 - 0.078 13.1 3.7 0.13 12.4 3.7 1.4 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Crystall PF00030.19 NODE_58411_length_287_cov_2.007937_g50472_i0forward_frame_3 - 0.089 13.0 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Beta/Gamma crystallin DUF865 PF05906.11 NODE_58410_length_287_cov_2.059524_g50471_i0forward_frame_3 - 1.3 8.9 3.8 0.76 9.6 0.4 2.0 2 0 0 2 2 2 0 Herpesvirus-7 repeat of unknown function (DUF865) Retinal PF15449.6 NODE_58408_length_287_cov_2.083333_g50469_i0forward_frame_2 - 2.1 6.0 7.3 1.8 6.3 7.3 1.0 1 0 0 1 1 1 0 Retinal protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks250.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks250.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks250.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks250.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EamA PF00892.20 NODE_58407_length_287_cov_2.095238_g50468_i0forward_frame_2 - 0.022 14.9 0.0 0.022 14.9 0.0 1.1 1 0 0 1 1 1 0 EamA-like transporter family IPK PF03770.16 NODE_58406_length_287_cov_2.126984_g50467_i0reverse_frame_3 - 0.0054 16.6 0.3 0.0057 16.5 0.3 1.0 1 0 0 1 1 1 1 Inositol polyphosphate kinase DUF2111 PF09884.9 NODE_58406_length_287_cov_2.126984_g50467_i0reverse_frame_3 - 0.13 12.3 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2111) DnaJ PF00226.31 NODE_58406_length_287_cov_2.126984_g50467_i0reverse_frame_2 - 1.3e-24 86.0 0.4 1.6e-24 85.8 0.4 1.1 1 0 0 1 1 1 1 DnaJ domain DUF5311 PF17238.2 NODE_58405_length_287_cov_2.130952_g50466_i0reverse_frame_2 - 0.0095 15.9 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5311) Phage_tail_X PF05489.12 NODE_58405_length_287_cov_2.130952_g50466_i0forward_frame_3 - 0.16 11.7 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Phage Tail Protein X Tropomodulin PF03250.14 NODE_58401_length_287_cov_2.218254_g50462_i0reverse_frame_3 - 0.054 13.6 0.1 0.07 13.2 0.1 1.1 1 0 0 1 1 1 0 Tropomodulin Ricin_B_lectin PF00652.22 NODE_58395_length_287_cov_2.357143_g50456_i0reverse_frame_2 - 2.3e-09 37.5 0.3 2.9e-09 37.3 0.3 1.1 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain Peptidase_M90 PF06167.12 NODE_58394_length_287_cov_2.380952_g50455_i0reverse_frame_3 - 1.4e-23 83.8 0.2 1.6e-23 83.6 0.2 1.0 1 0 0 1 1 1 1 Glucose-regulated metallo-peptidase M90 CCD48 PF15799.5 NODE_58394_length_287_cov_2.380952_g50455_i0reverse_frame_3 - 0.17 10.1 0.0 0.2 9.9 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 VGCC_alpha2 PF08473.11 NODE_58389_length_287_cov_2.496032_g50450_i0reverse_frame_2 - 0.066 12.0 0.0 0.078 11.8 0.0 1.0 1 0 0 1 1 1 0 Neuronal voltage-dependent calcium channel alpha 2acd DUF2527 PF10736.9 NODE_58387_length_287_cov_2.591270_g50448_i0forward_frame_3 - 0.043 13.7 0.5 0.13 12.1 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) E1-E2_ATPase PF00122.20 NODE_58383_length_287_cov_2.670635_g50444_i0forward_frame_3 - 2.5e-06 27.1 2.0 2.6e-06 27.1 2.0 1.0 1 0 0 1 1 1 1 E1-E2 ATPase Myotub-related PF06602.14 NODE_58381_length_287_cov_2.730159_g50442_i0reverse_frame_2 - 0.18 10.7 0.5 0.18 10.7 0.5 1.0 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain RepA1_leader PF08048.12 NODE_58381_length_287_cov_2.730159_g50442_i0reverse_frame_2 - 3.3 8.1 4.9 0.4 11.0 0.9 1.6 2 0 0 2 2 2 0 Tap RepA1 leader peptide DUF1947 PF09183.10 NODE_58381_length_287_cov_2.730159_g50442_i0forward_frame_2 - 0.18 12.2 0.4 0.33 11.3 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1947) PTS-HPr PF00381.19 NODE_58379_length_287_cov_2.757937_g50440_i0reverse_frame_3 - 3.6e-25 88.0 0.1 4.2e-25 87.8 0.1 1.1 1 0 0 1 1 1 1 PTS HPr component phosphorylation site MG1 PF17790.1 NODE_58379_length_287_cov_2.757937_g50440_i0reverse_frame_3 - 0.081 13.4 0.0 0.14 12.6 0.0 1.5 1 1 0 1 1 1 0 Macroglobulin domain MG1 Rad50_zn_hook PF04423.14 NODE_58379_length_287_cov_2.757937_g50440_i0reverse_frame_2 - 0.69 9.8 3.4 1.3 9.0 3.4 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif Kelch_1 PF01344.25 NODE_58378_length_287_cov_2.797619_g50439_i0reverse_frame_2 - 0.074 12.7 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Kelch motif Kelch_4 PF13418.6 NODE_58378_length_287_cov_2.797619_g50439_i0reverse_frame_2 - 0.087 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_58378_length_287_cov_2.797619_g50439_i0reverse_frame_2 - 0.16 12.0 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Kelch motif MM_CoA_mutase PF01642.22 NODE_58364_length_287_cov_9.853175_g50425_i0reverse_frame_2 - 3.2e-37 128.3 0.0 3.7e-37 128.1 0.0 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase PhnI PF05861.12 NODE_58364_length_287_cov_9.853175_g50425_i0reverse_frame_2 - 0.12 11.1 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnI) ORC4_C PF14629.6 NODE_58363_length_287_cov_12.559524_g50424_i0forward_frame_3 - 0.022 14.2 0.3 0.022 14.1 0.3 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus TMCO5 PF14992.6 NODE_58363_length_287_cov_12.559524_g50424_i0forward_frame_3 - 0.065 12.8 1.3 0.075 12.6 1.3 1.0 1 0 0 1 1 1 0 TMCO5 family Spore_YunB PF09560.10 NODE_58362_length_287_cov_19.293651_g50423_i0reverse_frame_3 - 0.15 12.1 0.1 0.21 11.6 0.1 1.2 1 0 0 1 1 1 0 Sporulation protein YunB (Spo_YunB) Lamprin PF06403.11 NODE_58360_length_287_cov_27.468254_g50421_i0reverse_frame_3 - 0.066 13.2 1.5 0.064 13.2 1.5 1.2 1 0 0 1 1 1 0 Lamprin C_tripleX PF02363.19 NODE_58359_length_287_cov_31.329365_g50420_i0reverse_frame_3 - 0.27 11.6 4.1 39 4.8 4.1 2.5 1 1 0 1 1 1 0 Cysteine rich repeat ATG_C PF09333.11 NODE_58353_length_287_cov_46.765873_g50414_i0reverse_frame_2 - 6e-10 39.3 0.0 8.7e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Autophagy-related protein C terminal domain Innexin PF00876.18 NODE_58352_length_287_cov_47.503968_g50413_i0forward_frame_3 - 1.3 8.2 5.2 1.1 8.4 5.2 1.1 1 0 0 1 1 1 0 Innexin TPR_12 PF13424.6 NODE_58351_length_287_cov_47.988095_g50412_i0reverse_frame_2 - 0.00012 22.3 0.6 0.00014 22.1 0.6 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_58351_length_287_cov_47.988095_g50412_i0reverse_frame_2 - 0.0011 18.7 0.1 0.0021 17.9 0.1 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat FAM199X PF15814.5 NODE_58351_length_287_cov_47.988095_g50412_i0forward_frame_3 - 0.03 13.4 3.6 0.035 13.2 3.6 1.0 1 0 0 1 1 1 0 Protein family FAM199X POTRA_3 PF17287.2 NODE_58346_length_287_cov_58.984127_g50407_i0forward_frame_3 - 0.14 11.6 0.1 0.25 10.8 0.1 1.3 1 0 0 1 1 1 0 POTRA domain DUF5496 PF17600.2 NODE_58342_length_287_cov_61.678571_g50403_i0reverse_frame_3 - 0.094 12.8 0.4 0.12 12.4 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5496) JmjN PF02375.17 NODE_58340_length_287_cov_62.619048_g50401_i0forward_frame_2 - 0.29 11.1 0.7 0.53 10.3 0.7 1.4 1 0 0 1 1 1 0 jmjN domain APC_u14 PF16635.5 NODE_58339_length_287_cov_63.273810_g50400_i0reverse_frame_3 - 6 7.5 16.6 8.8 6.9 16.6 1.3 1 1 0 1 1 1 0 Unstructured region on APC between SAMP and APC_crr Tweety PF04906.13 NODE_58337_length_287_cov_65.087302_g50398_i0reverse_frame_2 - 0.0029 16.3 0.6 0.003 16.3 0.6 1.1 1 0 0 1 1 1 1 Tweety FAM163 PF15069.6 NODE_58337_length_287_cov_65.087302_g50398_i0reverse_frame_2 - 0.0075 16.7 0.8 0.0079 16.7 0.8 1.1 1 0 0 1 1 1 1 FAM163 family Herpes_gE PF02480.16 NODE_58337_length_287_cov_65.087302_g50398_i0reverse_frame_2 - 0.067 11.9 0.0 0.076 11.7 0.0 1.0 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E TMEM52 PF14979.6 NODE_58337_length_287_cov_65.087302_g50398_i0reverse_frame_2 - 0.19 11.6 2.4 0.22 11.4 2.4 1.1 1 0 0 1 1 1 0 Transmembrane 52 DUF5558 PF17713.1 NODE_58336_length_287_cov_65.218254_g50397_i0reverse_frame_2 - 0.0057 17.0 0.5 0.0066 16.8 0.5 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5558) DUF2201_N PF13203.6 NODE_58334_length_287_cov_71.726190_g50395_i0reverse_frame_3 - 0.24 11.0 4.6 0.27 10.8 4.6 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain CW_7 PF08230.11 NODE_58330_length_287_cov_77.531746_g50391_i0reverse_frame_2 - 0.13 12.0 1.0 1.7 8.5 0.0 2.1 2 0 0 2 2 2 0 CW_7 repeat DUF3922 PF13059.6 NODE_58328_length_287_cov_86.615079_g50389_i0reverse_frame_3 - 0.026 14.9 0.2 0.039 14.4 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3992) DUF5102 PF17104.5 NODE_58328_length_287_cov_86.615079_g50389_i0reverse_frame_3 - 0.044 13.8 0.0 0.07 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5102) DUF4573 PF15140.6 NODE_58323_length_287_cov_91.075397_g50384_i0reverse_frame_2 - 0.0015 18.3 1.1 0.0017 18.1 1.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4573) DUF5105 PF17118.5 NODE_58323_length_287_cov_91.075397_g50384_i0reverse_frame_2 - 0.0018 18.1 0.4 0.0019 18.1 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5105) DnaJ PF00226.31 NODE_58318_length_287_cov_103.912698_g50379_i0reverse_frame_3 - 0.0032 17.6 0.1 0.0045 17.1 0.1 1.2 1 0 0 1 1 1 1 DnaJ domain zf-P11 PF03854.14 NODE_58316_length_287_cov_105.051587_g50377_i0reverse_frame_3 - 0.018 14.7 2.6 0.029 14.0 2.6 1.3 1 0 0 1 1 1 0 P-11 zinc finger C5HCH PF17982.1 NODE_58316_length_287_cov_105.051587_g50377_i0reverse_frame_3 - 0.14 12.4 0.9 0.58 10.4 0.1 2.0 1 1 2 3 3 3 0 NSD Cys-His rich domain Orbi_NS3 PF01616.16 NODE_58315_length_287_cov_106.190476_g50376_i0reverse_frame_3 - 0.13 11.9 0.1 0.16 11.7 0.1 1.1 1 0 0 1 1 1 0 Orbivirus NS3 Hol_Tox PF16935.5 NODE_58314_length_287_cov_108.841270_g50375_i0forward_frame_2 - 0.12 12.4 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Putative Holin-like Toxin (Hol-Tox) Adenylsucc_synt PF00709.21 NODE_58313_length_287_cov_109.785714_g50374_i0forward_frame_3 - 3.2e-18 65.9 0.0 3.4e-18 65.8 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Ribosomal_L29e PF01779.17 NODE_58307_length_287_cov_142.567460_g50368_i0reverse_frame_3 - 0.053 13.9 0.0 0.11 12.8 0.0 1.6 1 0 0 1 1 1 0 Ribosomal L29e protein family Pox_A_type_inc PF04508.12 NODE_58307_length_287_cov_142.567460_g50368_i0reverse_frame_2 - 0.22 11.4 0.3 0.36 10.8 0.3 1.3 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat RILP PF11461.8 NODE_58305_length_287_cov_152.484127_g50366_i0reverse_frame_2 - 0.48 10.7 4.6 0.36 11.1 2.6 1.8 1 1 1 2 2 2 0 Rab interacting lysosomal protein DUF3338 PF11819.8 NODE_58301_length_287_cov_180.841270_g50362_i0reverse_frame_2 - 0.011 15.8 0.6 0.012 15.6 0.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3338) TMEM18 PF14770.6 NODE_58299_length_287_cov_194.293651_g50360_i0forward_frame_2 - 0.53 10.3 9.1 6.4 6.8 0.3 2.0 1 1 1 2 2 2 0 Transmembrane protein 18 Lamprin PF06403.11 NODE_58297_length_287_cov_207.019841_g50358_i0reverse_frame_3 - 4.1 7.4 6.5 7.2 6.6 5.6 1.8 1 1 0 1 1 1 0 Lamprin UCH PF00443.29 NODE_58293_length_287_cov_534.329365_g50354_i0reverse_frame_2 - 1.5e-13 50.8 0.4 1.7e-13 50.6 0.4 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_58293_length_287_cov_534.329365_g50354_i0reverse_frame_2 - 7.9e-07 29.0 0.4 8.8e-07 28.8 0.4 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Popeye PF04831.13 NODE_58293_length_287_cov_534.329365_g50354_i0forward_frame_2 - 0.3 11.2 5.4 0.34 11.1 5.4 1.2 1 0 0 1 1 1 0 Popeye protein conserved region UCR_hinge PF02320.16 NODE_58292_length_287_cov_702.980159_g50353_i0reverse_frame_3 - 4.1e-12 46.1 1.2 5.3e-12 45.8 1.2 1.1 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein PPI_Ypi1 PF07491.11 NODE_58291_length_287_cov_837.928571_g50352_i0reverse_frame_2 - 8.3e-06 25.5 3.2 8.3e-06 25.5 3.2 2.3 2 2 0 2 2 2 1 Protein phosphatase inhibitor SR-25 PF10500.9 NODE_58291_length_287_cov_837.928571_g50352_i0reverse_frame_2 - 9.9 5.7 17.3 0.36 10.4 11.5 1.5 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein DUF3742 PF12553.8 NODE_58291_length_287_cov_837.928571_g50352_i0forward_frame_2 - 0.69 10.0 4.5 0.97 9.6 4.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) Melittin PF01372.17 NODE_58290_length_287_cov_2015.464286_g50351_i0reverse_frame_2 - 3.8 7.7 5.5 11 6.2 0.5 2.5 2 0 0 2 2 2 0 Melittin S-antigen PF05756.11 NODE_58290_length_287_cov_2015.464286_g50351_i0forward_frame_2 - 3.5 8.1 4.2 4.8 7.6 4.2 1.4 1 0 0 1 1 1 0 S-antigen protein Alpha_adaptin_C PF02296.16 NODE_58288_length_287_cov_2514.376984_g50349_i0forward_frame_3 - 0.096 12.9 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain DUF4752 PF15944.5 NODE_58285_length_288_cov_1.098814_g50346_i0reverse_frame_3 - 0.096 12.7 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) BrnA_antitoxin PF14384.6 NODE_58285_length_288_cov_1.098814_g50346_i0reverse_frame_3 - 0.23 12.0 0.5 38 4.9 0.1 3.0 2 1 0 2 2 2 0 BrnA antitoxin of type II toxin-antitoxin system DUF2013 PF09431.10 NODE_58285_length_288_cov_1.098814_g50346_i0forward_frame_3 - 0.0095 16.1 0.8 0.012 15.8 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2013) DUF421 PF04239.12 NODE_58284_length_288_cov_1.114625_g50345_i0forward_frame_3 - 0.094 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF421) DUF4481 PF14800.6 NODE_58280_length_288_cov_1.229249_g50341_i0reverse_frame_2 - 0.051 13.1 0.0 0.058 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) Med9 PF07544.13 NODE_58280_length_288_cov_1.229249_g50341_i0forward_frame_3 - 0.0019 18.3 0.2 0.0031 17.6 0.2 1.4 1 0 0 1 1 1 1 RNA polymerase II transcription mediator complex subunit 9 DNA_pol3_a_NII PF11490.8 NODE_58280_length_288_cov_1.229249_g50341_i0forward_frame_3 - 0.072 13.0 0.6 0.1 12.5 0.6 1.2 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II SdrG_C_C PF10425.9 NODE_58280_length_288_cov_1.229249_g50341_i0forward_frame_2 - 0.057 13.5 0.1 0.063 13.3 0.1 1.1 1 0 0 1 1 1 0 C-terminus of bacterial fibrinogen-binding adhesin SirA PF10747.9 NODE_58279_length_288_cov_1.249012_g50340_i0reverse_frame_3 - 0.0013 19.1 2.4 0.0014 18.9 2.4 1.2 1 0 0 1 1 1 1 Sporulation inhibitor of replication protein SirA Hydrolase PF00702.26 NODE_58277_length_288_cov_1.300395_g50338_i0forward_frame_2 - 0.0037 17.6 0.0 0.0043 17.4 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF1638 PF07796.11 NODE_58277_length_288_cov_1.300395_g50338_i0forward_frame_2 - 0.079 13.0 0.1 0.087 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1638) TAP_C PF03943.13 NODE_58275_length_288_cov_1.320158_g50336_i0reverse_frame_3 - 0.095 12.4 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 TAP C-terminal domain PAP2_C PF14360.6 NODE_58273_length_288_cov_1.371542_g50334_i0reverse_frame_3 - 4 8.1 8.3 0.32 11.6 1.6 1.9 2 0 0 2 2 2 0 PAP2 superfamily C-terminal Flt3_lig PF02947.14 NODE_58269_length_288_cov_1.478261_g50330_i0reverse_frame_3 - 0.1 12.8 0.2 0.11 12.7 0.2 1.3 1 1 0 1 1 1 0 flt3 ligand DASH_Dam1 PF08653.10 NODE_58265_length_288_cov_1.557312_g50326_i0forward_frame_3 - 0.0018 18.0 0.1 0.0037 17.0 0.1 1.5 1 0 0 1 1 1 1 DASH complex subunit Dam1 Lep_receptor_Ig PF06328.11 NODE_58263_length_288_cov_1.592885_g50324_i0forward_frame_2 - 0.017 15.0 0.1 0.017 15.0 0.1 1.5 2 0 0 2 2 2 0 Ig-like C2-type domain DUF1140 PF06600.11 NODE_58260_length_288_cov_1.683794_g50321_i0forward_frame_3 - 0.045 14.2 4.0 0.055 13.9 4.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1140) Stathmin PF00836.19 NODE_58260_length_288_cov_1.683794_g50321_i0forward_frame_3 - 0.047 13.7 12.0 0.06 13.3 12.0 1.2 1 0 0 1 1 1 0 Stathmin family Prefoldin_2 PF01920.20 NODE_58260_length_288_cov_1.683794_g50321_i0forward_frame_3 - 0.36 10.8 11.1 0.65 10.0 2.6 2.1 2 0 0 2 2 2 0 Prefoldin subunit zf-C2HC PF01530.18 NODE_58259_length_288_cov_1.683794_g50320_i0forward_frame_3 - 0.15 12.3 1.2 0.15 12.3 1.2 2.0 2 1 0 2 2 2 0 Zinc finger, C2HC type Antimicrobial12 PF08107.11 NODE_58254_length_288_cov_1.739130_g50315_i0forward_frame_3 - 0.1 12.4 0.2 0.1 12.4 0.2 1.8 3 0 0 3 3 3 0 Pleurocidin family DUF4059 PF13268.6 NODE_58253_length_288_cov_1.790514_g50314_i0reverse_frame_2 - 0.032 14.6 0.8 0.041 14.3 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4059) Hanta_G2 PF01561.16 NODE_58249_length_288_cov_1.853755_g50310_i0forward_frame_2 - 0.027 13.1 0.8 0.031 12.9 0.8 1.0 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 zf-SCNM1 PF15803.5 NODE_58246_length_288_cov_1.916996_g50307_i0forward_frame_3 - 0.00071 19.2 1.1 0.00071 19.2 1.1 2.1 3 0 0 3 3 3 1 Zinc-finger of sodium channel modifier 1 DUF3099 PF11298.8 NODE_58243_length_288_cov_1.968379_g50304_i0forward_frame_2 - 0.085 13.0 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) DUF3106 PF11304.8 NODE_58240_length_288_cov_2.015810_g50301_i0forward_frame_2 - 0.0034 17.8 0.1 0.0048 17.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3106) Phe_tRNA-synt_N PF02912.18 NODE_58240_length_288_cov_2.015810_g50301_i0forward_frame_2 - 0.034 14.1 0.0 0.053 13.5 0.0 1.2 1 0 0 1 1 1 0 Aminoacyl tRNA synthetase class II, N-terminal domain Mt_ATP-synt_B PF05405.14 NODE_58240_length_288_cov_2.015810_g50301_i0forward_frame_2 - 0.066 12.8 0.1 0.093 12.3 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) ABC_membrane PF00664.23 NODE_58239_length_288_cov_2.031621_g50300_i0reverse_frame_3 - 5.4e-18 65.6 1.0 5.7e-18 65.5 1.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF4295 PF14128.6 NODE_58238_length_288_cov_2.039526_g50299_i0reverse_frame_3 - 0.067 13.0 0.0 0.2 11.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4295) Stomoxyn PF11585.8 NODE_58234_length_288_cov_2.150198_g50295_i0reverse_frame_3 - 0.032 14.3 1.0 0.057 13.4 1.0 1.3 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn WBP-1 PF11669.8 NODE_58234_length_288_cov_2.150198_g50295_i0forward_frame_2 - 0.3 11.7 3.1 0.59 10.8 3.1 1.5 1 1 0 1 1 1 0 WW domain-binding protein 1 Rtt106_N PF18215.1 NODE_58232_length_288_cov_2.158103_g50293_i0reverse_frame_3 - 0.11 12.3 0.8 0.21 11.4 0.2 1.8 1 1 1 2 2 2 0 Histone chaperone Rtt106 N-terminal domain UPF0203 PF05254.12 NODE_58230_length_288_cov_2.169960_g50291_i0forward_frame_3 - 0.052 13.8 0.2 0.093 13.0 0.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) OAM_alpha PF16552.5 NODE_58222_length_288_cov_2.391304_g50283_i0reverse_frame_2 - 0.099 12.5 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 D-ornithine 4,5-aminomutase alpha-subunit PAS PF00989.25 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 1.9e-12 47.1 0.1 2.1e-12 47.0 0.1 1.0 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 7.7e-05 22.6 0.0 9.2e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 PAS domain PAS_7 PF12860.7 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.00012 22.2 0.0 0.00014 22.0 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.00013 22.1 0.0 0.00015 21.9 0.0 1.1 1 0 0 1 1 1 1 PAS fold DUF3361 PF11841.8 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.0021 18.0 0.1 0.0024 17.8 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3361) PAS_10 PF13596.6 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.04 14.5 0.0 0.047 14.3 0.0 1.1 1 0 0 1 1 1 0 PAS domain PAS_9 PF13426.7 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.066 13.5 0.0 0.077 13.3 0.0 1.2 1 0 0 1 1 1 0 PAS domain zf-RanBP PF00641.18 NODE_58220_length_288_cov_2.482213_g50281_i0reverse_frame_2 - 1.3 8.4 9.6 2.9 7.3 0.4 2.4 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others MFS_1 PF07690.16 NODE_58220_length_288_cov_2.482213_g50281_i0forward_frame_3 - 2.2e-08 33.4 10.1 2.6e-08 33.2 10.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Cytochrom_B_C PF00032.17 NODE_58220_length_288_cov_2.482213_g50281_i0forward_frame_3 - 0.034 14.4 0.2 0.048 13.9 0.2 1.4 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD WhiA_N PF10298.9 NODE_58218_length_288_cov_2.525692_g50279_i0forward_frame_3 - 0.068 13.2 0.1 0.096 12.7 0.1 1.3 1 0 0 1 1 1 0 WhiA N-terminal LAGLIDADG-like domain DUF2284 PF10050.9 NODE_58213_length_288_cov_2.822134_g50274_i0forward_frame_2 - 0.055 13.2 0.7 0.078 12.7 0.7 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Got1 PF04178.12 NODE_58212_length_288_cov_2.893281_g50273_i0forward_frame_3 - 0.0048 17.3 2.2 0.0059 17.0 2.2 1.3 1 1 0 1 1 1 1 Got1/Sft2-like family DUF4051 PF13260.6 NODE_58210_length_288_cov_3.391304_g50271_i0reverse_frame_2 - 6.7e-24 83.4 1.2 9.2e-24 82.9 1.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4051) DUF2621 PF11084.8 NODE_58210_length_288_cov_3.391304_g50271_i0reverse_frame_2 - 0.036 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2621) Form_Nir_trans PF01226.17 NODE_58209_length_288_cov_3.430830_g50270_i0reverse_frame_2 - 6.9e-06 25.6 3.0 7.8e-06 25.4 3.0 1.1 1 0 0 1 1 1 1 Formate/nitrite transporter Brr6_like_C_C PF10104.9 NODE_58209_length_288_cov_3.430830_g50270_i0reverse_frame_2 - 0.059 13.2 0.0 0.089 12.6 0.0 1.2 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain Tgi2PP PF18250.1 NODE_58209_length_288_cov_3.430830_g50270_i0forward_frame_2 - 0.36 11.1 1.0 0.58 10.4 1.0 1.3 1 0 0 1 1 1 0 Effector immunity protein Tgi2PP Vps53_N PF04100.12 NODE_58207_length_288_cov_3.454545_g50268_i0forward_frame_2 - 0.0066 15.4 0.6 0.0073 15.3 0.6 1.0 1 0 0 1 1 1 1 Vps53-like, N-terminal Retinal PF15449.6 NODE_58203_length_288_cov_4.209486_g50264_i0forward_frame_3 - 1.1 7.0 6.9 1.2 6.8 6.9 1.0 1 0 0 1 1 1 0 Retinal protein ACAS_N PF16177.5 NODE_58201_length_288_cov_4.822134_g50262_i0reverse_frame_3 - 5.1e-21 74.3 0.2 6.7e-21 74.0 0.2 1.2 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus DUF3925 PF13063.6 NODE_58201_length_288_cov_4.822134_g50262_i0forward_frame_2 - 0.095 12.9 0.2 0.17 12.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3925) Baculo_11_kDa PF06143.11 NODE_58199_length_288_cov_5.762846_g50260_i0reverse_frame_3 - 0.07 12.7 1.1 0.1 12.2 1.1 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family TFIIF_alpha PF05793.12 NODE_58199_length_288_cov_5.762846_g50260_i0forward_frame_3 - 0.27 9.8 0.2 0.3 9.6 0.2 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Methyltransf_29 PF03141.16 NODE_58199_length_288_cov_5.762846_g50260_i0forward_frame_2 - 0.07 11.7 2.6 0.083 11.4 2.6 1.0 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase SlyX PF04102.12 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.0095 16.5 0.8 0.84 10.3 0.5 2.1 2 0 0 2 2 2 1 SlyX TolA_bind_tri PF16331.5 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.012 15.7 1.9 0.27 11.3 1.1 2.2 1 1 1 2 2 2 0 TolA binding protein trimerisation PI3K_P85_iSH2 PF16454.5 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.016 14.8 0.6 0.068 12.8 0.6 1.7 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain MetW PF07021.12 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.073 12.7 0.2 0.076 12.6 0.2 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW BLOC1_2 PF10046.9 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.16 12.3 2.1 10 6.5 0.1 2.1 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DivIC PF04977.15 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.27 11.0 5.6 1.9 8.3 1.3 2.1 1 1 1 2 2 2 0 Septum formation initiator WD-3 PF09765.9 NODE_58196_length_288_cov_28.600791_g50257_i0reverse_frame_2 - 0.03 13.6 1.6 0.034 13.5 1.6 1.1 1 0 0 1 1 1 0 WD-repeat region Euplotes_phero PF05842.11 NODE_58196_length_288_cov_28.600791_g50257_i0forward_frame_2 - 0.034 14.7 0.5 0.038 14.6 0.5 1.1 1 0 0 1 1 1 0 Euplotes octocarinatus mating pheromone protein Pigment_DH PF06324.11 NODE_58189_length_288_cov_54.778656_g50250_i0reverse_frame_2 - 0.039 14.0 0.6 0.12 12.5 0.6 1.7 1 0 0 1 1 1 0 Pigment-dispersing hormone (PDH) Dimer_Tnp_hAT PF05699.14 NODE_58189_length_288_cov_54.778656_g50250_i0reverse_frame_2 - 0.93 9.3 9.9 0.088 12.6 4.6 1.9 1 1 1 2 2 2 0 hAT family C-terminal dimerisation region MCR PF18509.1 NODE_58185_length_288_cov_61.075099_g50246_i0forward_frame_3 - 0.034 13.7 0.5 0.064 12.8 0.5 1.5 1 0 0 1 1 1 0 Magnetochrome domain Defensin_5 PF18251.1 NODE_58185_length_288_cov_61.075099_g50246_i0forward_frame_3 - 0.38 10.9 6.6 0.23 11.6 4.3 1.9 1 1 0 1 1 1 0 Fungal defensin Copsin zf-C2HCIx2C PF10782.9 NODE_58179_length_288_cov_71.276680_g50240_i0reverse_frame_3 - 0.02 14.8 0.2 0.032 14.2 0.2 1.3 1 0 0 1 1 1 0 Zinc-finger Ycf4 PF02392.16 NODE_58174_length_288_cov_78.328063_g50235_i0reverse_frame_3 - 0.074 12.6 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 Ycf4 Corona_M PF01635.18 NODE_58174_length_288_cov_78.328063_g50235_i0forward_frame_3 - 8 5.7 11.7 8.8 5.6 11.7 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein PUF PF00806.19 NODE_58170_length_288_cov_105.569170_g50231_i0reverse_frame_3 - 2.8e-09 36.1 0.3 3.2e-08 32.8 0.0 2.3 2 0 0 2 2 2 1 Pumilio-family RNA binding repeat PaRep2b PF07775.11 NODE_58170_length_288_cov_105.569170_g50231_i0reverse_frame_3 - 0.019 13.4 0.0 0.02 13.4 0.0 1.0 1 0 0 1 1 1 0 PaRep2b protein Pneumovirus_M2 PF06436.11 NODE_58170_length_288_cov_105.569170_g50231_i0reverse_frame_3 - 0.026 14.0 2.0 0.03 13.8 2.0 1.1 1 0 0 1 1 1 0 Pneumovirus matrix protein 2 (M2) CDC4_D PF16856.5 NODE_58170_length_288_cov_105.569170_g50231_i0forward_frame_3 - 0.14 12.0 1.6 0.32 10.9 0.2 2.1 2 0 0 2 2 2 0 Cell division control protein 4 dimerisation domain TT_ORF1 PF02956.14 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_3 - 4.9 5.7 7.2 5 5.7 7.2 1.0 1 0 0 1 1 1 0 TT viral orf 1 DUF3304 PF11745.8 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 0.021 15.2 0.2 0.023 15.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3304) RNA_polI_A34 PF08208.11 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 0.31 11.1 15.8 0.32 11.0 15.8 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Auts2 PF15336.6 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 0.72 9.9 10.5 0.78 9.8 10.5 1.1 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Presenilin PF01080.17 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 5.8 5.6 6.1 6.6 5.4 6.1 1.0 1 0 0 1 1 1 0 Presenilin MAP17 PF15807.5 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 7.3 6.9 9.8 9.5 6.5 9.8 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Coilin_N PF15862.5 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 7.5 6.3 17.3 9 6.1 17.3 1.1 1 0 0 1 1 1 0 Coilin N-terminus Fijivirus_P9-2 PF06837.11 NODE_58167_length_288_cov_124.296443_g50228_i0reverse_frame_3 - 0.57 9.6 8.3 0.72 9.3 8.3 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein Antimicrobial19 PF08225.11 NODE_58167_length_288_cov_124.296443_g50228_i0reverse_frame_3 - 9.8 5.9 8.0 5.7 6.7 1.4 2.7 3 0 0 3 3 3 0 Pseudin antimicrobial peptide 6PF2K PF01591.18 NODE_58167_length_288_cov_124.296443_g50228_i0forward_frame_2 - 0.023 14.0 1.1 0.028 13.7 1.1 1.0 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Transcrip_reg PF01709.20 NODE_58166_length_288_cov_136.857708_g50227_i0reverse_frame_2 - 0.04 13.3 0.0 0.047 13.1 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator Chlor_dismutase PF06778.12 NODE_58166_length_288_cov_136.857708_g50227_i0reverse_frame_2 - 0.13 11.8 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Chlorite dismutase DUF2587 PF10759.9 NODE_58163_length_288_cov_141.806324_g50224_i0forward_frame_3 - 0.096 12.2 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2587) Viral_cys_rich PF08008.12 NODE_58160_length_288_cov_224.754941_g50221_i0reverse_frame_2 - 0.045 13.8 0.0 0.059 13.4 0.0 1.2 1 0 0 1 1 1 0 Viral cysteine rich PYNP_C PF07831.13 NODE_58160_length_288_cov_224.754941_g50221_i0forward_frame_3 - 0.067 12.8 0.0 0.099 12.3 0.0 1.3 1 0 0 1 1 1 0 Pyrimidine nucleoside phosphorylase C-terminal domain DAHP_snth_FXD PF18152.1 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_3 - 0.02 14.7 0.2 0.035 13.9 0.2 1.4 1 0 0 1 1 1 0 DAHP synthase ferredoxin-like domain DUF3774 PF12609.8 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_3 - 4.3 8.4 6.7 7.8 7.6 6.7 1.5 1 1 0 1 1 1 0 Wound-induced protein Glutenin_hmw PF03157.13 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_2 - 0.056 11.9 16.8 0.07 11.5 16.8 1.1 1 0 0 1 1 1 0 High molecular weight glutenin subunit Tim17 PF02466.19 NODE_58153_length_288_cov_653.304348_g50214_i0reverse_frame_2 - 6.3e-09 36.2 1.7 7.5e-09 36.0 1.7 1.1 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Tim17 PF02466.19 NODE_58152_length_288_cov_704.225296_g50213_i0reverse_frame_2 - 6.3e-09 36.2 1.7 7.5e-09 36.0 1.7 1.1 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family EpCAM_N PF18635.1 NODE_58151_length_288_cov_2283.620553_g50212_i0reverse_frame_3 - 0.0008 19.5 0.5 0.0015 18.6 0.5 1.6 1 0 0 1 1 1 1 Epithelial cell adhesion molecule N-terminal domain EpCAM_N PF18635.1 NODE_58150_length_288_cov_2806.169960_g50211_i0reverse_frame_3 - 0.00079 19.5 0.5 0.0015 18.6 0.5 1.6 1 0 0 1 1 1 1 Epithelial cell adhesion molecule N-terminal domain DUF2628 PF10947.8 NODE_58149_length_288_cov_46143.094862_g50210_i0reverse_frame_3 - 0.21 11.9 4.0 0.26 11.7 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) DUF4795 PF16043.5 NODE_58149_length_288_cov_46143.094862_g50210_i0forward_frame_2 - 0.0012 18.5 0.9 0.0013 18.3 0.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) Yippee-Mis18 PF03226.14 ORF99418 - 8.6e-08 32.3 3.6 1.1e-07 32.0 3.6 1.1 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly RIG-I_C-RD PF11648.8 ORF99418 - 0.013 15.8 2.0 0.018 15.3 2.0 1.2 1 0 0 1 1 1 0 C-terminal domain of RIG-I DUF2753 PF10952.8 ORF99418 - 0.049 13.8 0.0 0.081 13.1 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2753) Plavaka PF18759.1 ORF98989 - 8.9 5.4 6.6 0.3 10.3 0.7 1.5 1 1 1 2 2 2 0 Plavaka transposase TRP PF06011.12 ORF98576 - 0.00049 18.9 7.8 0.00058 18.7 7.8 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel ICAM_N PF03921.14 ORF96678 - 0.14 11.8 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain Paralemmin PF03285.15 ORF9658 - 0.58 9.7 4.2 0.65 9.5 4.2 1.1 1 0 0 1 1 1 0 Paralemmin PetG PF02529.15 ORF95563 - 0.082 12.8 0.8 0.14 12.0 0.8 1.4 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit 5 TAP42 PF04177.12 ORF95207 - 0.02 14.0 0.0 0.02 14.0 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family NdhS PF11623.8 ORF95207 - 0.13 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S EndIII_4Fe-2S PF10576.9 ORF95206 - 1.2 9.6 0.3 1.2 9.6 0.3 2.5 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III DUF4499 PF14934.6 ORF94768 - 0.03 14.7 1.4 0.038 14.3 0.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4499) Herpes_glycop_D PF01537.17 ORF94754 - 0.009 16.2 0.3 0.01 16.0 0.3 1.2 1 0 0 1 1 1 1 Herpesvirus glycoprotein D/GG/GX domain Membralin PF09746.9 ORF94754 - 0.079 12.0 0.1 0.089 11.8 0.1 1.1 1 0 0 1 1 1 0 Tumour-associated protein Afaf PF15339.6 ORF94045 - 0.17 11.6 0.5 0.21 11.3 0.3 1.3 1 1 0 1 1 1 0 Acrosome formation-associated factor PRR20 PF15708.5 ORF93902 - 0.31 10.9 11.0 0.36 10.7 11.0 1.0 1 0 0 1 1 1 0 Proline-rich protein family 20 ETC_C1_NDUFA4 PF04800.12 ORF93867 - 0.028 14.7 0.1 0.042 14.1 0.1 1.3 1 0 0 1 1 1 0 ETC complex I subunit conserved region tRNA_SAD PF07973.14 ORF93506 - 0.042 14.0 1.4 0.22 11.7 0.2 2.1 2 0 0 2 2 2 0 Threonyl and Alanyl tRNA synthetase second additional domain DUF4271 PF14093.6 ORF9194 - 0.00038 20.4 2.7 0.00043 20.3 2.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4271) FtsL PF04999.13 ORF9194 - 0.15 12.1 1.7 0.11 12.5 0.7 1.4 1 1 0 1 1 1 0 Cell division protein FtsL Tetraspanin PF00335.20 ORF9194 - 3.8 7.2 5.0 11 5.7 5.0 1.6 1 1 0 1 1 1 0 Tetraspanin family BID PF06393.11 ORF90842 - 0.02 14.4 0.5 0.024 14.2 0.5 1.1 1 0 0 1 1 1 0 BH3 interacting domain (BID) Zip PF02535.22 ORF90842 - 0.76 8.9 1.9 0.8 8.9 1.9 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF90842 - 1.5 7.5 2.6 1.5 7.5 2.6 1.1 1 0 0 1 1 1 0 Presenilin 120_Rick_ant PF12574.8 ORF90659 - 0.027 13.7 0.1 0.029 13.6 0.1 1.1 1 0 0 1 1 1 0 120 KDa Rickettsia surface antigen Haemocyan_bet_s PF14830.6 ORF89962 - 0.15 12.0 0.0 0.18 11.8 0.0 1.2 1 1 0 1 1 1 0 Haemocyanin beta-sandwich Pkinase PF00069.25 ORF89095 - 0.0099 15.3 0.0 0.017 14.5 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Peptidase_C26 PF07722.13 ORF89081 - 4.6e-06 26.5 0.0 4.6e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Peptidase C26 PUB PF09409.10 ORF88264 - 4e-13 49.1 0.7 5.4e-13 48.7 0.7 1.2 1 0 0 1 1 1 1 PUB domain Vps52 PF04129.12 ORF88264 - 0.00038 19.3 0.4 0.00045 19.1 0.4 1.1 1 0 0 1 1 1 1 Vps52 / Sac2 family ETF_QO PF05187.13 ORF88220 - 0.0012 18.9 0.0 0.0016 18.6 0.0 1.3 1 1 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_10 PF13237.6 ORF88220 - 0.0067 16.5 0.7 0.011 15.8 0.7 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF88220 - 0.012 15.8 0.4 0.019 15.1 0.4 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF88220 - 0.62 10.3 5.5 0.47 10.7 1.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain COX16 PF14138.6 ORF88171 - 0.23 12.0 0.0 0.33 11.5 0.0 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 ATP-synt_C PF00137.21 ORF88078 - 3.6e-13 49.7 12.5 5.6e-13 49.0 12.5 1.3 1 0 0 1 1 1 1 ATP synthase subunit C G0-G1_switch_2 PF15103.6 ORF88078 - 0.027 14.9 0.0 0.041 14.3 0.0 1.3 1 0 0 1 1 1 0 G0/G1 switch protein 2 TfoX_N PF04993.13 ORF88078 - 0.094 12.9 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 TfoX N-terminal domain FKS1_dom1 PF14288.6 ORF87480 - 0.2 12.0 0.1 0.26 11.6 0.1 1.1 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 TFIIB_C_1 PF18542.1 ORF8635 - 0.0098 15.9 0.1 0.013 15.5 0.1 1.3 1 0 0 1 1 1 1 Transcription factor IIB C-terminal module 1 DUF1471 PF07338.13 ORF85877 - 2.3e-18 65.9 0.0 3.9e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF1307 PF06998.11 ORF85665 - 0.018 15.1 5.6 0.021 14.8 5.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) HtrL_YibB PF09612.10 ORF85665 - 0.32 10.5 4.8 0.37 10.3 4.8 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (HtrL_YibB) Homeobox_KN PF05920.11 ORF8514 - 5.8e-18 64.5 0.4 1.2e-17 63.5 0.4 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF8514 - 1.3e-10 40.9 0.9 2.1e-10 40.3 0.9 1.4 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF8514 - 0.0019 18.0 0.2 0.0052 16.6 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DUF1456 PF07308.13 ORF8514 - 0.07 13.5 0.2 0.23 11.8 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1456) Plavaka PF18759.1 ORF84908 - 8.9 5.4 6.6 0.3 10.3 0.7 1.5 1 1 1 2 2 2 0 Plavaka transposase UPF0515 PF15135.6 ORF84833 - 0.0064 15.9 5.0 0.0067 15.8 5.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein UPF0515 APT PF03440.14 ORF84833 - 0.084 12.8 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Aerolysin/Pertussis toxin (APT) domain BRE PF06113.12 ORF84677 - 0.062 12.1 0.1 0.073 11.9 0.1 1.1 1 0 0 1 1 1 0 Brain and reproductive organ-expressed protein (BRE) DIL PF01843.19 ORF84677 - 0.083 13.2 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 DIL domain DUF1015 PF06245.11 ORF84677 - 0.11 11.3 0.2 0.11 11.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1015) 120_Rick_ant PF12574.8 ORF84286 - 0.027 13.7 0.1 0.029 13.6 0.1 1.1 1 0 0 1 1 1 0 120 KDa Rickettsia surface antigen MAD PF05557.13 ORF83583 - 0.0041 15.5 4.0 0.0045 15.4 4.0 1.0 1 0 0 1 1 1 1 Mitotic checkpoint protein DUF2115 PF09888.9 ORF83583 - 0.08 13.5 2.0 0.088 13.3 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) DUF1053 PF06327.14 ORF83583 - 0.11 13.0 2.4 0.14 12.7 2.1 1.3 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1053) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks251.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks251.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks251.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks251.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SpoIISA_toxin PF14171.6 ORF83216 - 0.041 13.6 0.5 0.52 10.0 0.1 1.9 1 1 1 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system Chalcone_2 PF16035.5 ORF83022 - 0.076 12.8 0.4 0.088 12.6 0.4 1.1 1 0 0 1 1 1 0 Chalcone isomerase like ETRAMP PF09716.10 ORF82431 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) CBP_BcsR PF10945.8 ORF81933 - 0.19 11.2 0.0 0.32 10.5 0.0 1.3 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR ETRAMP PF09716.10 ORF81780 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF4490 PF14892.6 ORF81774 - 4.3e-07 29.9 1.1 8.3e-07 29.0 1.1 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4490) DUF4811 PF16069.5 ORF81774 - 0.024 14.5 0.3 0.031 14.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) Grg1 PF11034.8 ORF81436 - 0.055 13.7 1.3 0.11 12.7 0.2 1.9 2 0 0 2 2 2 0 Glucose-repressible protein Grg1 CDT1_C PF16679.5 ORF81436 - 0.15 12.5 0.0 0.18 12.3 0.0 1.3 1 1 0 1 1 1 0 DNA replication factor Cdt1 C-terminal domain Spec3 PF15795.5 ORF80569 - 5.3e-11 42.9 18.6 2.8e-08 34.2 18.6 2.1 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein TM2 PF05154.16 ORF80569 - 7.8 6.9 12.8 1.9 8.9 6.2 2.1 2 0 0 2 2 2 0 TM2 domain Pneumo_matrix PF03393.16 ORF80461 - 0.047 12.9 0.0 0.047 12.9 0.0 1.1 1 0 0 1 1 1 0 Pneumovirus matrix protein Tub PF01167.18 ORF77722 - 3.8e-18 66.1 0.0 4.2e-18 66.0 0.0 1.0 1 0 0 1 1 1 1 Tub family MAPEG PF01124.18 ORF77673 - 5.1e-06 26.4 0.2 5.6e-06 26.3 0.2 1.1 1 0 0 1 1 1 1 MAPEG family BES1_N PF05687.13 ORF77142 - 0.63 10.4 4.5 0.76 10.1 4.0 1.4 1 1 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal SLATT_fungal PF18142.1 ORF76210 - 0.22 11.5 0.0 0.29 11.1 0.0 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain Csd3_N PF18059.1 ORF7589 - 0.066 13.7 0.1 0.14 12.7 0.1 1.4 1 1 0 1 1 1 0 Csd3 N-terminal CNP_C_terminal PF17839.1 ORF75460 - 0.009 16.7 0.2 0.011 16.5 0.2 1.2 1 0 0 1 1 1 1 C-terminal domain of cyclic nucleotide phosphodiesterase Calpain_III PF01067.22 ORF75460 - 0.019 15.3 0.2 0.02 15.2 0.2 1.2 1 0 0 1 1 1 0 Calpain large subunit, domain III ETRAMP PF09716.10 ORF75296 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF515 PF04415.12 ORF75193 - 6.2 5.1 6.3 7.1 4.9 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) MIP PF00230.20 ORF74608 - 2.2e-08 34.1 3.1 3.5e-08 33.5 3.1 1.5 1 1 0 1 1 1 1 Major intrinsic protein DUF4233 PF14017.6 ORF74608 - 0.41 11.0 8.0 0.68 10.3 1.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4233) Afaf PF15339.6 ORF74133 - 0.17 11.6 0.5 0.21 11.3 0.3 1.3 1 1 0 1 1 1 0 Acrosome formation-associated factor TRP PF06011.12 ORF74114 - 0.00058 18.7 8.0 0.00068 18.5 8.0 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF751 PF05421.11 ORF74114 - 0.038 14.7 6.4 0.038 14.7 6.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF751) TAP42 PF04177.12 ORF74088 - 0.044 12.9 0.0 0.046 12.8 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family NdhS PF11623.8 ORF74088 - 0.13 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S AAA_lid_3 PF17862.1 ORF73976 - 1.9e-05 24.3 0.0 3.3e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 AAA+ lid domain CooC_C PF15976.5 ORF7395 - 1.4e-23 82.7 0.0 1.7e-23 82.5 0.0 1.1 1 0 0 1 1 1 1 CS1-pili formation C-terminal CarboxypepD_reg PF13620.6 ORF7395 - 5.3e-05 23.4 0.0 7.3e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 ORF7395 - 6.7e-05 22.8 0.0 8.7e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 CarboxypepD_reg-like domain MetallophosN PF16371.5 ORF7395 - 0.0059 16.8 0.0 0.0087 16.3 0.0 1.3 1 0 0 1 1 1 1 N terminal of Calcineurin-like phosphoesterase Pollen_Ole_e_I PF01190.17 ORF7395 - 0.017 15.5 0.0 0.021 15.2 0.0 1.3 1 0 0 1 1 1 0 Pollen proteins Ole e I like Tex_N PF09371.10 ORF72983 - 0.086 12.5 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Tex-like protein N-terminal domain DUF2623 PF11115.8 ORF72717 - 3.8e-49 164.7 2.2 4.2e-49 164.5 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2623) DUF1307 PF06998.11 ORF72191 - 0.018 15.1 5.6 0.021 14.8 5.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) HtrL_YibB PF09612.10 ORF72191 - 0.32 10.5 4.8 0.37 10.3 4.8 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (HtrL_YibB) DUF4920 PF16267.5 ORF72072 - 9.3 6.3 5.7 12 6.0 0.1 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4920) Wbp11 PF09429.10 ORF71502 - 0.12 12.8 0.4 0.12 12.8 0.4 2.1 1 1 1 2 2 2 0 WW domain binding protein 11 DNA_pol_phi PF04931.13 ORF71502 - 9.7 4.1 16.7 11 3.9 16.7 1.0 1 0 0 1 1 1 0 DNA polymerase phi Ribosomal_S30AE PF02482.19 ORF70177 - 4.5e-27 94.6 0.9 5.1e-27 94.5 0.9 1.0 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein EutN_CcmL PF03319.13 ORF70150 - 1.3e-29 102.6 0.4 1.5e-29 102.4 0.4 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutN/carboxysome COG4 PF08318.12 ORF69549 - 0.00019 20.7 0.3 0.00022 20.4 0.3 1.0 1 0 0 1 1 1 1 COG4 transport protein Herpes_glycop_D PF01537.17 ORF69346 - 0.009 16.2 0.3 0.01 16.0 0.3 1.2 1 0 0 1 1 1 1 Herpesvirus glycoprotein D/GG/GX domain Membralin PF09746.9 ORF69346 - 0.079 12.0 0.1 0.089 11.8 0.1 1.1 1 0 0 1 1 1 0 Tumour-associated protein DUF2951 PF11166.8 ORF68334 - 0.48 10.7 8.7 0.54 10.5 3.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) FAM83 PF07894.12 ORF67731 - 0.023 14.3 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 FAM83 A-H DUF3980 PF13140.6 ORF67468 - 0.0077 16.6 0.0 0.0098 16.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3980) Carbam_trans_C PF16861.5 ORF66864 - 0.073 12.7 0.0 0.082 12.5 0.0 1.1 1 0 0 1 1 1 0 Carbamoyltransferase C-terminus GGDEF PF00990.21 ORF66596 - 8e-10 38.7 0.0 1.6e-09 37.7 0.0 1.5 1 1 0 1 1 1 1 Diguanylate cyclase, GGDEF domain ATG16 PF08614.11 ORF66156 - 0.011 16.0 6.1 0.014 15.7 6.1 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 ORF66156 - 0.07 13.1 2.5 0.089 12.8 2.5 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4349 PF14257.6 ORF66156 - 0.65 9.4 6.6 0.7 9.3 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) DivIC PF04977.15 ORF66156 - 0.88 9.4 4.9 0.29 11.0 0.9 1.9 1 1 1 2 2 2 0 Septum formation initiator Shisa PF13908.6 ORF65947 - 0.12 12.7 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator His_Phos_1 PF00300.22 ORF6527 - 0.0034 17.1 0.0 0.0046 16.7 0.0 1.3 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Rad60-SLD PF11976.8 ORF65147 - 0.0014 18.4 0.0 0.0017 18.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 ORF65147 - 0.0075 16.0 0.0 0.0085 15.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin family DUF3012 PF11216.8 ORF63773 - 0.2 11.7 0.0 0.34 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3012) Pkinase PF00069.25 ORF63541 - 2.7e-05 23.7 0.0 2.9e-05 23.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63541 - 6.1e-05 22.4 0.0 6.6e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Macro PF01661.21 ORF63475 - 3e-15 56.3 0.0 3.4e-15 56.1 0.0 1.0 1 0 0 1 1 1 1 Macro domain BatA PF07584.11 ORF63460 - 0.11 12.9 0.1 0.13 12.6 0.1 1.2 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal KAR9 PF08580.10 ORF63375 - 0.64 8.5 2.6 0.68 8.4 2.6 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 CDC14 PF08045.11 ORF63254 - 0.13 11.4 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 Cell division control protein 14, SIN component DUF4239 PF14023.6 ORF63032 - 0.0025 17.6 0.1 0.0028 17.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4239) ETRAMP PF09716.10 ORF62677 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Shisa PF13908.6 ORF6223 - 0.12 12.7 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Sec63 PF02889.16 ORF6188 - 0.073 12.2 4.8 0.067 12.3 4.0 1.3 1 1 0 1 1 1 0 Sec63 Brl domain TMEM43 PF07787.12 ORF61640 - 0.84 9.0 4.8 2 7.7 4.8 1.5 1 1 0 1 1 1 0 Transmembrane protein 43 TAP42 PF04177.12 ORF60582 - 0.044 12.9 0.0 0.046 12.8 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family NdhS PF11623.8 ORF60582 - 0.13 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S EndIII_4Fe-2S PF10576.9 ORF60231 - 0.026 14.9 2.3 0.077 13.4 2.3 1.9 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III EF-hand_1 PF00036.32 ORF59484 - 4.3e-09 35.3 2.3 2.7e-06 26.5 0.7 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF59484 - 1.8e-07 30.5 1.3 5.2e-05 22.8 0.3 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF59484 - 7.1e-07 29.6 3.6 9.4e-07 29.2 3.6 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF59484 - 0.00011 21.5 0.8 0.0022 17.4 0.2 2.3 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF59484 - 0.0048 16.7 5.4 0.016 15.0 0.9 2.7 1 1 2 3 3 3 1 EF-hand domain pair FAM193_C PF15914.5 ORF59484 - 0.011 15.5 0.1 0.016 14.9 0.1 1.4 1 0 0 1 1 1 0 FAM193 family C-terminal IL31 PF15209.6 ORF59484 - 0.016 15.0 0.1 0.02 14.7 0.1 1.4 1 1 0 1 1 1 0 Interleukin 31 EF-hand_10 PF14788.6 ORF59484 - 0.026 14.4 1.1 0.026 14.4 1.1 2.0 2 1 0 2 2 2 0 EF hand EF-hand_11 PF08976.11 ORF59484 - 0.059 14.2 0.1 0.07 14.0 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain Trans_coact PF16805.5 ORF58728 - 0.076 13.1 0.3 0.13 12.4 0.3 1.4 1 0 0 1 1 1 0 Phage late-transcription coactivator DUF1943 PF09172.11 ORF58553 - 0.31 10.2 1.0 0.33 10.1 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Pre-PUA PF17832.1 ORF58129 - 0.073 13.8 1.3 0.11 13.2 1.3 1.3 1 0 0 1 1 1 0 Pre-PUA-like domain ATG16 PF08614.11 ORF57971 - 0.011 16.0 6.1 0.014 15.7 6.1 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 ORF57971 - 0.07 13.1 2.5 0.089 12.8 2.5 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4349 PF14257.6 ORF57971 - 0.65 9.4 6.6 0.7 9.3 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) DivIC PF04977.15 ORF57971 - 0.88 9.4 4.9 0.29 11.0 0.9 1.9 1 1 1 2 2 2 0 Septum formation initiator RRM_1 PF00076.22 ORF57739 - 1.7e-08 34.2 0.1 3.1e-08 33.3 0.1 1.5 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF57739 - 0.0015 18.5 0.2 0.002 18.2 0.2 1.1 1 0 0 1 1 1 1 RNA binding motif RRM_occluded PF16842.5 ORF57739 - 0.0028 17.5 0.1 0.0051 16.7 0.1 1.5 1 1 0 1 1 1 1 Occluded RNA-recognition motif RRM_7 PF16367.5 ORF57739 - 0.003 17.6 0.0 0.004 17.2 0.0 1.4 1 1 0 1 1 1 1 RNA recognition motif DUF2583 PF10762.9 ORF56676 - 0.008 16.6 0.2 0.011 16.2 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2583) PLAC PF08686.11 ORF5638 - 0.14 13.0 1.2 0.54 11.1 1.3 1.9 1 1 1 2 2 2 0 PLAC (protease and lacunin) domain Peptidase_M24 PF00557.24 ORF55245 - 8.3e-06 25.6 0.0 1.1e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF2102 PF09875.9 ORF54052 - 0.22 11.2 0.0 0.28 10.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) KAR9 PF08580.10 ORF53461 - 0.64 8.5 2.6 0.68 8.4 2.6 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 zf_C2H2_13 PF18508.1 ORF53214 - 0.8 9.3 4.0 6.1 6.5 0.8 2.2 2 0 0 2 2 2 0 Zinc finger domain Conotoxin PF02950.17 ORF5307 - 0.022 15.7 0.0 0.03 15.3 0.0 1.1 1 0 0 1 1 1 0 Conotoxin Apq12 PF12716.7 ORF52498 - 0.77 9.7 5.8 0.13 12.3 2.1 1.6 2 0 0 2 2 2 0 Nuclear pore assembly and biogenesis DUF3357 PF11837.8 ORF52170 - 0.065 13.7 0.0 0.072 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) ETRAMP PF09716.10 ORF52094 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Como_SCP PF02248.16 ORF52037 - 0.0071 15.9 0.0 0.009 15.6 0.0 1.2 1 0 0 1 1 1 1 Small coat protein FRB_dom PF08771.11 ORF51212 - 0.0034 17.7 2.5 0.004 17.5 2.5 1.0 1 0 0 1 1 1 1 FKBP12-rapamycin binding domain DUF4200 PF13863.6 ORF51212 - 0.036 14.5 8.3 0.073 13.5 8.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) GrpE PF01025.19 ORF51212 - 0.037 13.7 7.6 0.043 13.5 7.6 1.0 1 0 0 1 1 1 0 GrpE DUF5600 PF18150.1 ORF51212 - 0.039 14.5 1.5 0.07 13.7 1.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF5600) YihI PF04220.12 ORF51212 - 0.043 13.5 3.5 0.051 13.3 3.5 1.2 1 0 0 1 1 1 0 Der GTPase activator (YihI) DUF4349 PF14257.6 ORF51212 - 0.049 13.1 1.5 0.064 12.7 1.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4349) HAMP PF00672.25 ORF51212 - 0.053 13.9 0.1 0.11 12.9 0.0 1.6 2 0 0 2 2 2 0 HAMP domain Atg14 PF10186.9 ORF51212 - 0.064 12.3 2.6 0.08 12.0 2.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF51212 - 0.077 13.5 3.1 0.12 12.9 3.1 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region THOC7 PF05615.13 ORF51212 - 0.1 12.9 0.6 0.1 12.9 0.6 2.1 1 1 1 2 2 2 0 Tho complex subunit 7 DUF4446 PF14584.6 ORF51212 - 0.16 12.0 7.7 0.15 12.1 4.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF16 PF01519.16 ORF51212 - 0.2 12.1 11.9 0.036 14.5 5.5 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 PCRF PF03462.18 ORF51212 - 0.29 11.0 4.3 0.18 11.6 1.9 1.5 1 1 0 1 1 1 0 PCRF domain Glu-tRNAGln PF02686.15 ORF51212 - 0.55 10.6 4.6 0.37 11.1 1.0 2.2 2 1 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit CHIP_TPR_N PF18391.1 ORF51212 - 0.57 11.0 6.6 1 10.2 3.2 2.1 1 1 1 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain DUF2802 PF10975.8 ORF51212 - 0.88 9.7 5.2 3.7 7.8 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2802) DUF948 PF06103.11 ORF51212 - 2.4 8.4 7.4 34 4.8 7.4 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) zf-C4H2 PF10146.9 ORF51212 - 3.7 7.8 8.6 5.7 7.2 8.6 1.4 1 1 0 1 1 1 0 Zinc finger-containing protein SlyX PF04102.12 ORF51212 - 4.6 7.9 9.9 5.6 7.7 0.2 2.9 1 1 2 3 3 3 0 SlyX Plavaka PF18759.1 ORF51034 - 8.9 5.4 6.6 0.3 10.3 0.7 1.5 1 1 1 2 2 2 0 Plavaka transposase Peptidase_C74 PF12387.8 ORF50757 - 1.2 8.6 2.1 0.63 9.5 0.1 1.5 2 0 0 2 2 2 0 Pestivirus NS2 peptidase YafQ_toxin PF15738.5 ORF50443 - 0.58 10.5 8.6 0.81 10.1 7.8 1.8 1 1 0 1 1 1 0 Bacterial toxin of type II toxin-antitoxin system, YafQ Astro_capsid_N PF03115.14 ORF50443 - 1.7 7.2 7.1 1.7 7.2 7.1 1.0 1 0 0 1 1 1 0 Astrovirus capsid protein precursor Med4 PF10018.9 ORF50443 - 6.7 6.3 11.0 7.5 6.2 11.0 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 SipA_VBS PF17985.1 ORF50292 - 0.17 11.9 0.6 9.2 6.4 0.0 2.3 2 0 0 2 2 2 0 SipA vinculin binding site HRCT1 PF15758.5 ORF4998 - 0.026 15.5 5.6 0.035 15.1 5.6 1.3 1 0 0 1 1 1 0 Histidine-rich carboxyl terminus protein 1 TM231 PF10149.9 ORF49732 - 2.5e-12 46.8 0.0 2.5e-12 46.8 0.0 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 Csd3_N PF18059.1 ORF49441 - 0.066 13.7 0.1 0.14 12.7 0.1 1.4 1 1 0 1 1 1 0 Csd3 N-terminal Spore_III_AB PF09548.10 ORF49234 - 0.04 14.0 0.6 0.12 12.4 0.1 1.8 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) MRP-63 PF14978.6 ORF49234 - 0.62 10.7 4.1 0.88 10.2 4.1 1.3 1 1 0 1 1 1 0 Mitochondrial ribosome protein 63 Aldedh PF00171.22 ORF49234 - 3.3 6.1 6.4 3.5 6.0 6.4 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family TAP42 PF04177.12 ORF48392 - 0.044 12.9 0.1 0.047 12.8 0.1 1.0 1 0 0 1 1 1 0 TAP42-like family NdhS PF11623.8 ORF48392 - 0.13 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S ER PF01133.17 ORF4790 - 0.011 15.8 0.1 0.013 15.5 0.1 1.3 1 1 0 1 1 1 0 Enhancer of rudimentary NPA PF16469.5 ORF47786 - 0.0017 18.9 0.0 0.0021 18.6 0.0 1.0 1 0 0 1 1 1 1 Nematode polyprotein allergen ABA-1 HEAT PF02985.22 ORF47786 - 0.065 13.5 0.0 1.5 9.3 0.0 2.2 2 0 0 2 2 2 0 HEAT repeat MORN PF02493.20 ORF46559 - 3e-10 39.4 16.0 0.00012 21.8 3.0 4.5 4 2 0 4 4 4 3 MORN repeat DUF3048_C PF17479.2 ORF46559 - 0.021 15.2 2.7 0.086 13.2 2.3 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain MOSP_N PF02707.16 ORF46278 - 0.028 14.2 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Major Outer Sheath Protein N-terminal region DUF454 PF04304.13 ORF44508 - 0.012 15.6 1.4 0.016 15.2 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF454) Herpes_glycop_D PF01537.17 ORF43761 - 0.009 16.2 0.3 0.01 16.0 0.3 1.2 1 0 0 1 1 1 1 Herpesvirus glycoprotein D/GG/GX domain Membralin PF09746.9 ORF43761 - 0.079 12.0 0.1 0.089 11.8 0.1 1.1 1 0 0 1 1 1 0 Tumour-associated protein EF-hand_1 PF00036.32 ORF43421 - 1.1e-05 24.6 0.4 1.8e-05 23.9 0.4 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF43421 - 7.6e-05 22.3 0.3 0.00013 21.6 0.3 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF43421 - 0.0043 17.5 0.0 0.0047 17.4 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF43421 - 0.0076 16.1 0.2 0.012 15.5 0.2 1.3 1 0 0 1 1 1 1 EF-hand domain pair SASP_gamma PF04259.14 ORF43421 - 0.017 15.6 0.2 0.023 15.2 0.2 1.2 1 0 0 1 1 1 0 Small, acid-soluble spore protein, gamma-type EF-hand_5 PF13202.6 ORF43421 - 0.034 13.7 0.3 0.054 13.0 0.3 1.3 1 0 0 1 1 1 0 EF hand DSS1_SEM1 PF05160.13 ORF43356 - 6e-14 51.9 12.5 9.7e-14 51.2 12.5 1.3 1 0 0 1 1 1 1 DSS1/SEM1 family SH3_14 PF18343.1 ORF43356 - 0.052 13.6 0.5 0.061 13.4 0.5 1.1 1 0 0 1 1 1 0 Dda helicase SH3 domain CHZ PF09649.10 ORF423 - 3.5 7.2 5.2 6.1 6.4 5.2 1.4 1 0 0 1 1 1 0 Histone chaperone domain CHZ Bystin PF05291.11 ORF41040 - 0.08 12.2 0.0 0.089 12.1 0.0 1.1 1 0 0 1 1 1 0 Bystin DUF3384 PF11864.8 ORF4052 - 0.082 11.8 0.0 0.082 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3384) SHIPPO-rpt PF07004.12 ORF40386 - 0.12 13.3 1.5 0.14 13.1 0.3 1.8 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat TAL_FSA PF00923.19 ORF40237 - 8.8e-20 71.2 0.0 9.7e-20 71.1 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase MOSP_N PF02707.16 ORF39887 - 0.028 14.2 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Major Outer Sheath Protein N-terminal region Homeobox_KN PF05920.11 ORF39734 - 5.8e-18 64.5 0.4 1.2e-17 63.5 0.4 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF39734 - 1.3e-10 40.9 0.9 2.1e-10 40.3 0.9 1.4 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF39734 - 0.0019 18.0 0.2 0.0052 16.6 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DUF1456 PF07308.13 ORF39734 - 0.07 13.5 0.2 0.23 11.8 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1456) Roc PF08477.13 ORF39398 - 0.00018 21.7 0.0 0.00028 21.1 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF39398 - 0.0016 18.0 0.0 0.0022 17.6 0.0 1.3 1 0 0 1 1 1 1 Ras family AAA_16 PF13191.6 ORF39398 - 0.015 15.7 0.0 0.019 15.4 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 ORF39398 - 0.016 15.5 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF39398 - 0.021 14.5 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 ORF39398 - 0.024 14.1 0.0 0.029 13.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein MMR_HSR1 PF01926.23 ORF39398 - 0.027 14.6 0.0 0.046 13.8 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF39398 - 0.036 13.6 0.0 0.052 13.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF39398 - 0.11 12.4 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 ORF39398 - 0.12 12.8 0.1 0.17 12.3 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 ORF39398 - 0.12 11.6 0.0 0.19 11.0 0.0 1.4 1 1 0 1 1 1 0 Zeta toxin DAP3 PF10236.9 ORF39398 - 0.13 11.4 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 NACHT PF05729.12 ORF39398 - 0.15 12.0 0.0 0.6 10.0 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_5 PF07728.14 ORF39398 - 0.19 11.7 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Roc PF08477.13 ORF39105 - 0.00018 21.7 0.0 0.00028 21.1 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF39105 - 0.0016 18.0 0.0 0.0022 17.6 0.0 1.3 1 0 0 1 1 1 1 Ras family AAA_16 PF13191.6 ORF39105 - 0.015 15.7 0.0 0.019 15.4 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 ORF39105 - 0.016 15.5 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF39105 - 0.021 14.5 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 ORF39105 - 0.024 14.1 0.0 0.029 13.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein MMR_HSR1 PF01926.23 ORF39105 - 0.027 14.6 0.0 0.046 13.8 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF39105 - 0.036 13.6 0.0 0.052 13.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF39105 - 0.11 12.4 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 ORF39105 - 0.12 12.8 0.1 0.17 12.3 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 ORF39105 - 0.12 11.6 0.0 0.19 11.0 0.0 1.4 1 1 0 1 1 1 0 Zeta toxin DAP3 PF10236.9 ORF39105 - 0.13 11.4 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 NACHT PF05729.12 ORF39105 - 0.15 12.0 0.0 0.6 10.0 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_5 PF07728.14 ORF39105 - 0.19 11.7 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) zf-MYND PF01753.18 ORF38459 - 0.17 12.0 6.6 0.28 11.3 6.6 1.4 1 0 0 1 1 1 0 MYND finger FAM199X PF15814.5 ORF37405 - 3.9 6.4 8.3 4.5 6.3 8.3 1.1 1 0 0 1 1 1 0 Protein family FAM199X Homeobox_KN PF05920.11 ORF37381 - 5.8e-18 64.5 0.4 1.2e-17 63.5 0.4 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF37381 - 1.3e-10 40.9 0.9 2.1e-10 40.3 0.9 1.4 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF37381 - 0.0019 18.0 0.2 0.0052 16.6 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DUF1456 PF07308.13 ORF37381 - 0.07 13.5 0.2 0.23 11.8 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1456) DUF2866 PF11065.8 ORF37187 - 0.026 14.5 0.3 0.23 11.5 0.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2866) Herpes_UL6 PF01763.16 ORF36711 - 0.032 12.7 0.4 0.034 12.7 0.4 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Arch_fla_DE PF04659.13 ORF36073 - 0.014 15.2 0.2 0.018 14.9 0.2 1.1 1 0 0 1 1 1 0 Archaeal flagella protein DiS_P_DiS PF06750.13 ORF34914 - 0.017 15.2 0.2 0.02 15.0 0.2 1.3 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain DsrH PF04077.12 ORF34570 - 1.5e-29 101.9 0.0 1.7e-29 101.8 0.0 1.0 1 0 0 1 1 1 1 DsrH like protein Agenet PF05641.12 ORF33535 - 0.0019 18.6 0.2 0.0057 17.1 0.1 1.7 2 0 0 2 2 2 1 Agenet domain SMC_N PF02463.19 ORF32260 - 0.015 14.7 0.1 0.017 14.5 0.1 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 ORF32260 - 0.051 14.1 0.1 0.095 13.2 0.1 1.4 1 0 0 1 1 1 0 ABC transporter IlvN PF07991.12 ORF31394 - 0.15 11.7 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain MFS_1 PF07690.16 ORF31076 - 5.4e-06 25.6 6.5 5.8e-06 25.5 6.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily FANC_SAP PF18081.1 ORF30576 - 2.4 8.4 7.3 7.6 6.8 7.3 1.8 1 1 0 1 1 1 0 Fanconi anemia-associated nuclease SAP domain BCNT PF07572.12 ORF29634 - 0.044 13.9 0.3 0.066 13.3 0.3 1.3 1 0 0 1 1 1 0 Bucentaur or craniofacial development ATP-synt_ab_C PF00306.27 ORF29634 - 0.047 14.0 0.9 0.066 13.5 0.3 1.5 1 1 1 2 2 2 0 ATP synthase alpha/beta chain, C terminal domain Nucleoside_tran PF01733.18 ORF28947 - 0.005 16.3 0.0 0.005 16.3 0.0 1.0 1 0 0 1 1 1 1 Nucleoside transporter zf-RING_UBOX PF13445.6 ORF28738 - 0.37 10.9 0.1 0.37 10.9 0.1 2.0 2 0 0 2 2 2 0 RING-type zinc-finger DUF4719 PF15843.5 ORF28350 - 7.4 6.6 10.3 21 5.1 10.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4719) Y1_Tnp PF01797.16 ORF28112 - 2e-24 86.0 0.0 2.4e-24 85.8 0.0 1.1 1 0 0 1 1 1 1 Transposase IS200 like Glyco_hydro_66 PF13199.6 ORF28112 - 0.23 10.0 0.0 0.28 9.8 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 66 Trns_repr_metal PF02583.17 ORF27596 - 7.4e-22 77.5 1.6 8.6e-22 77.3 1.6 1.0 1 0 0 1 1 1 1 Metal-sensitive transcriptional repressor Img2 PF05046.14 ORF27596 - 0.023 15.0 0.1 0.028 14.7 0.1 1.4 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) V-SNARE PF05008.15 ORF27596 - 0.073 13.5 0.2 0.23 11.9 0.0 1.9 3 0 0 3 3 3 0 Vesicle transport v-SNARE protein N-terminus Dicty_REP PF05086.12 ORF27436 - 0.3 9.0 1.2 0.28 9.1 1.2 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein SSP160 PF06933.11 ORF27436 - 3.9 5.6 11.8 5.5 5.1 11.8 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Dmrt1 PF12374.8 ORF27436 - 8.9 6.8 9.0 30 5.1 9.0 1.8 1 1 0 1 1 1 0 Double-sex mab3 related transcription factor 1 LRR_11 PF18831.1 ORF26121 - 7.1 6.3 7.9 24 4.6 0.2 3.3 3 0 0 3 3 3 0 Leucine-rich repeat Herpes_teg_N PF04843.12 ORF26118 - 0.031 14.0 0.1 0.033 13.9 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus tegument protein, N-terminal conserved region RskA PF10099.9 ORF26016 - 0.018 15.3 4.7 0.02 15.2 4.7 1.2 1 0 0 1 1 1 0 Anti-sigma-K factor rskA Cystatin PF00031.21 ORF25771 - 8.8e-09 35.5 0.0 9.4e-09 35.4 0.0 1.2 1 0 0 1 1 1 1 Cystatin domain DUF2951 PF11166.8 ORF24700 - 0.48 10.7 8.7 0.54 10.5 3.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) ETRAMP PF09716.10 ORF23989 - 0.072 13.2 0.2 0.086 12.9 0.2 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DHHC PF01529.20 ORF23457 - 0.011 15.8 0.1 0.017 15.2 0.1 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Afaf PF15339.6 ORF22930 - 0.17 11.6 0.5 0.21 11.3 0.3 1.3 1 1 0 1 1 1 0 Acrosome formation-associated factor E1_dh PF00676.20 ORF22168 - 1.7e-25 89.6 0.0 1.9e-25 89.4 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component E1_dh PF00676.20 ORF22167 - 0.0054 15.7 0.0 0.0069 15.4 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component QIL1 PF15884.5 ORF22167 - 0.18 12.4 0.3 0.84 10.3 0.1 1.9 1 1 1 2 2 2 0 MICOS complex subunit MIC13, QIL1 FtsJ PF01728.19 ORF2098 - 1.6e-23 83.7 0.0 1.8e-23 83.6 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltr_RsmB-F PF01189.17 ORF2098 - 0.077 12.6 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F ILVD_EDD PF00920.21 ORF20359 - 0.059 12.0 0.0 0.059 12.0 0.0 1.0 1 0 0 1 1 1 0 Dehydratase family Whib PF02467.16 ORF20359 - 0.069 13.7 2.2 0.12 12.9 2.2 1.6 1 1 0 1 1 1 0 Transcription factor WhiB ATG16 PF08614.11 ORF19604 - 0.011 16.0 6.1 0.014 15.7 6.1 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 ORF19604 - 0.07 13.1 2.5 0.089 12.8 2.5 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4349 PF14257.6 ORF19604 - 0.65 9.4 6.6 0.7 9.3 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) DivIC PF04977.15 ORF19604 - 0.88 9.4 4.9 0.29 11.0 0.9 1.9 1 1 1 2 2 2 0 Septum formation initiator PMC2NT PF08066.12 ORF19548 - 0.027 15.1 0.9 0.038 14.7 0.6 1.3 1 1 0 1 1 1 0 PMC2NT (NUC016) domain BLOC1_2 PF10046.9 ORF19548 - 0.068 13.5 0.5 0.085 13.2 0.5 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 14-3-3 PF00244.20 ORF19407 - 8.5e-20 71.2 0.8 9.3e-20 71.1 0.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Thoc2 PF11732.8 ORF19407 - 0.015 15.4 0.0 0.51 10.4 0.0 2.1 2 0 0 2 2 2 0 Transcription- and export-related complex subunit DUF4441 PF14536.6 ORF19407 - 0.038 14.2 0.8 7.9 6.7 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4441) IFRD PF05004.13 ORF1832 - 0.08 12.0 3.8 0.081 12.0 3.8 1.0 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) Top6b_C PF18000.1 ORF1832 - 0.099 12.8 0.5 0.12 12.5 0.5 1.2 1 0 0 1 1 1 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain SseC PF04888.12 ORF1832 - 2.2 7.8 8.0 1.3 8.5 6.4 1.4 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family Afaf PF15339.6 ORF18238 - 0.17 11.6 0.5 0.21 11.3 0.3 1.3 1 1 0 1 1 1 0 Acrosome formation-associated factor SpoIIID PF12116.8 ORF18235 - 0.098 12.8 2.5 0.088 12.9 0.9 1.8 1 1 1 2 2 2 0 Stage III sporulation protein D FRB_dom PF08771.11 ORF18235 - 0.11 13.0 0.3 0.15 12.5 0.3 1.3 1 1 0 1 1 1 0 FKBP12-rapamycin binding domain His_binding PF02098.16 ORF17991 - 0.073 13.1 2.9 0.083 12.9 2.9 1.1 1 0 0 1 1 1 0 Tick histamine binding protein CYYR1 PF10873.8 ORF17712 - 0.046 14.2 0.1 0.058 13.8 0.1 1.2 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 ETRAMP PF09716.10 ORF17580 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) FOXO_KIX_bdg PF16675.5 ORF16875 - 0.057 13.7 0.8 0.48 10.8 0.1 2.1 1 1 1 2 2 2 0 KIX-binding domain of forkhead box O, CR2 LZ_Tnp_IS481 PF13011.6 ORF16875 - 0.15 12.6 0.0 0.2 12.2 0.0 1.2 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 FtsK_gamma PF09397.10 ORF16477 - 0.041 13.7 0.1 0.071 12.9 0.1 1.5 1 0 0 1 1 1 0 Ftsk gamma domain KAR9 PF08580.10 ORF16326 - 0.36 9.3 2.2 0.4 9.2 2.2 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 Robl_LC7 PF03259.17 ORF1518 - 6.4e-13 48.3 0.0 7.6e-13 48.1 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain TAP42 PF04177.12 ORF14705 - 0.044 12.9 0.0 0.046 12.8 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family NdhS PF11623.8 ORF14705 - 0.13 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S EamA PF00892.20 ORF14287 - 2.2e-06 27.9 2.9 2.4e-06 27.7 2.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family RseC_MucC PF04246.12 ORF14287 - 0.095 12.7 2.4 0.11 12.5 2.4 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC 2OG-FeII_Oxy_3 PF13640.6 ORF13686 - 3.1e-12 47.2 0.0 3.4e-12 47.1 0.0 1.0 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF13686 - 1.4e-08 35.3 0.0 1.7e-08 35.0 0.0 1.0 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Viral_alk_exo PF01771.17 ORF13579 - 0.17 10.7 0.1 0.18 10.7 0.1 1.1 1 0 0 1 1 1 0 Viral alkaline exonuclease PG_binding_2 PF08823.11 ORF13390 - 0.83 10.0 2.8 18 5.7 0.2 2.2 1 1 1 2 2 2 0 Putative peptidoglycan binding domain XK-related PF09815.9 ORF12577 - 0.025 13.7 0.1 0.031 13.3 0.1 1.1 1 0 0 1 1 1 0 XK-related protein BatD PF13584.6 ORF12577 - 0.041 12.7 0.1 0.046 12.5 0.1 1.0 1 0 0 1 1 1 0 Oxygen tolerance WBP-1 PF11669.8 ORF12577 - 0.058 14.0 0.4 0.07 13.8 0.4 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 GT87 PF09594.10 ORF12577 - 0.13 12.0 0.0 0.14 11.9 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 87 DUF4381 PF14316.6 ORF12577 - 0.15 12.3 0.1 0.21 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) SMC_Nse1 PF07574.13 ORF12318 - 0.042 13.7 0.0 0.054 13.4 0.0 1.1 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex DUF1394 PF07159.12 ORF12318 - 0.11 11.8 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1394) ECSCR PF15820.5 ORF12044 - 0.029 14.2 3.0 0.029 14.2 3.0 1.6 1 1 1 2 2 2 0 Endothelial cell-specific chemotaxis regulator ATP-synt_C PF00137.21 ORF11460 - 3.6e-13 49.7 12.5 5.6e-13 49.0 12.5 1.3 1 0 0 1 1 1 1 ATP synthase subunit C G0-G1_switch_2 PF15103.6 ORF11460 - 0.027 14.9 0.0 0.041 14.3 0.0 1.3 1 0 0 1 1 1 0 G0/G1 switch protein 2 TfoX_N PF04993.13 ORF11460 - 0.094 12.9 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 TfoX N-terminal domain PfkB PF00294.24 ORF112392 - 0.046 13.0 0.4 0.052 12.8 0.4 1.0 1 0 0 1 1 1 0 pfkB family carbohydrate kinase Phage_Mu_Gam PF07352.12 ORF112312 - 0.00015 21.7 5.4 0.0002 21.3 5.4 1.1 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein FAM184 PF15665.5 ORF112312 - 0.00023 21.0 3.5 0.0003 20.7 3.5 1.1 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B LMBR1 PF04791.16 ORF112312 - 0.0077 15.2 0.1 0.0086 15.0 0.1 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein CR6_interact PF10147.9 ORF112312 - 0.02 14.6 1.9 0.024 14.3 1.9 1.1 1 0 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 FlxA PF14282.6 ORF112312 - 0.046 13.7 3.8 0.058 13.4 3.8 1.1 1 0 0 1 1 1 0 FlxA-like protein DUF2721 PF11026.8 ORF112312 - 0.096 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) ABC_tran_Xtn PF12848.7 ORF112312 - 0.1 12.7 5.5 0.14 12.2 5.5 1.2 1 0 0 1 1 1 0 ABC transporter DUF2208 PF09973.9 ORF111975 - 0.007 16.0 0.7 0.0078 15.9 0.7 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) CCDC-167 PF15188.6 ORF111975 - 0.021 15.2 1.2 0.026 14.9 1.2 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF722 PF05263.11 ORF111975 - 0.028 14.6 1.4 0.031 14.5 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF722) DUF4337 PF14235.6 ORF111975 - 0.63 10.1 3.3 0.76 9.9 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Peptidase_C26 PF07722.13 ORF111782 - 4.6e-06 26.5 0.0 4.6e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Peptidase C26 Thioredoxin PF00085.20 ORF111708 - 0.0067 16.4 0.0 0.0096 15.9 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin HyaE PF07449.11 ORF111708 - 0.12 12.3 0.0 0.27 11.2 0.0 1.5 1 1 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF2865 PF11064.8 ORF111646 - 0.016 15.6 0.1 0.019 15.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2865) SDA1 PF05285.12 ORF11105 - 0.14 11.6 0.3 0.15 11.5 0.3 1.0 1 0 0 1 1 1 0 SDA1 His_binding PF02098.16 ORF110997 - 0.073 13.1 2.9 0.083 12.9 2.9 1.1 1 0 0 1 1 1 0 Tick histamine binding protein KIAA1430 PF13879.6 ORF110651 - 1.1e-10 42.2 7.9 1.1e-10 42.2 7.9 1.7 2 0 0 2 2 2 1 KIAA1430 homologue GPP34 PF05719.11 ORF110651 - 0.066 13.2 0.1 0.07 13.2 0.1 1.1 1 0 0 1 1 1 0 Golgi phosphoprotein 3 (GPP34) Orthopox_A36R PF05950.11 ORF110651 - 0.21 11.7 2.2 0.5 10.5 0.2 1.9 1 1 1 2 2 2 0 Orthopoxvirus A36R protein Baculo_gp64 PF03273.13 ORF11041 - 0.018 13.9 0.3 0.02 13.7 0.3 1.0 1 0 0 1 1 1 0 Baculovirus gp64 envelope glycoprotein family DZR PF12773.7 ORF109305 - 0.047 13.7 5.0 0.053 13.6 4.1 1.8 1 1 0 1 1 1 0 Double zinc ribbon Ribosomal_L19 PF01245.20 ORF108366 - 0.015 15.3 0.1 2.2 8.3 0.0 2.0 1 1 1 2 2 2 0 Ribosomal protein L19 ELYS-bb PF16687.5 ORF107754 - 0.026 13.2 0.1 0.029 13.0 0.1 1.0 1 0 0 1 1 1 0 beta-propeller of ELYS nucleoporin ETRAMP PF09716.10 ORF107089 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Connexin PF00029.19 ORF107019 - 0.23 11.2 5.3 0.25 11.1 5.3 1.0 1 0 0 1 1 1 0 Connexin FTCD_C PF04961.12 ORF107019 - 0.64 9.8 3.5 0.73 9.6 3.5 1.2 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase CDC45 PF02724.14 ORF107019 - 0.71 8.1 8.9 0.7 8.1 8.9 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF2828 PF11443.8 ORF107019 - 0.73 7.8 7.3 0.8 7.7 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) EOS1 PF12326.8 ORF107019 - 0.77 9.7 2.9 1 9.3 2.9 1.2 1 0 0 1 1 1 0 N-glycosylation protein betaPIX_CC PF16523.5 ORF107019 - 0.92 9.4 21.1 1 9.2 11.9 2.1 1 1 1 2 2 2 0 betaPIX coiled coil TMPIT PF07851.13 ORF107019 - 3.4 6.8 6.5 3.8 6.7 6.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein Sec62 PF03839.16 ORF107019 - 5.6 6.4 8.1 6.6 6.2 8.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Caudal_act PF04731.12 ORF107000 - 0.021 15.2 0.3 0.024 15.0 0.3 1.1 1 0 0 1 1 1 0 Caudal like protein activation region NosL PF05573.12 ORF10681 - 0.033 14.5 0.1 0.037 14.4 0.1 1.3 1 0 0 1 1 1 0 NosL DUF4552 PF15089.6 ORF106808 - 0.033 13.3 4.5 0.036 13.1 4.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) zf-RRPl_C4 PF17026.5 ORF105813 - 0.089 12.9 3.7 0.11 12.6 3.5 1.3 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type zf-C2H2_10 PF16588.5 ORF105684 - 0.059 13.1 4.6 0.074 12.8 1.0 2.4 2 0 0 2 2 2 0 C2H2 zinc-finger PrgI PF12666.7 ORF105176 - 0.09 13.5 0.7 0.13 13.0 0.7 1.3 1 0 0 1 1 1 0 PrgI family protein ETRAMP PF09716.10 ORF103923 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF2070 PF09843.9 ORF103780 - 5 5.3 10.0 5 5.3 10.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Rbsn PF11464.8 ORF103756 - 0.11 12.3 0.4 0.17 11.6 0.4 1.3 1 0 0 1 1 1 0 Rabenosyn Rab binding domain Rubella_Capsid PF05750.11 ORF102575 - 0.016 14.8 4.5 0.018 14.6 4.5 1.0 1 0 0 1 1 1 0 Rubella capsid protein Rho_RNA_bind PF07497.12 ORF102552 - 0.025 14.5 0.0 0.033 14.0 0.0 1.3 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain DUF2200 PF09966.9 ORF102552 - 0.038 14.1 0.1 0.063 13.4 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2200) TAP42 PF04177.12 ORF101437 - 0.044 12.9 0.0 0.046 12.8 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family NdhS PF11623.8 ORF101437 - 0.13 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S DUF1883 PF08980.10 ORF101361 - 0.029 14.3 0.2 0.036 14.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1883) Homeobox_KN PF05920.11 ORF101215 - 5.8e-18 64.5 0.4 1.2e-17 63.5 0.4 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF101215 - 1.3e-10 40.9 0.9 2.1e-10 40.3 0.9 1.4 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF101215 - 0.0019 18.0 0.2 0.0052 16.6 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DUF1456 PF07308.13 ORF101215 - 0.07 13.5 0.2 0.23 11.8 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1456) Ras PF00071.22 ORF101126 - 1.5e-06 27.9 0.0 1.7e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Ras family Grg1 PF11034.8 ORF100723 - 0.055 13.7 1.3 0.11 12.7 0.2 1.9 2 0 0 2 2 2 0 Glucose-repressible protein Grg1 CDT1_C PF16679.5 ORF100723 - 0.15 12.5 0.0 0.18 12.3 0.0 1.3 1 1 0 1 1 1 0 DNA replication factor Cdt1 C-terminal domain MvaI_BcnI PF15515.6 NODE_59399_length_280_cov_1.493878_g51459_i0reverse_frame_1 - 0.011 15.6 0.3 0.014 15.2 0.3 1.0 1 0 0 1 1 1 0 MvaI/BcnI restriction endonuclease family NS3_envE PF02723.14 NODE_59397_length_280_cov_1.567347_g51457_i0forward_frame_1 - 7.5 6.7 15.5 0.064 13.3 6.1 1.9 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E DUF327 PF03885.13 NODE_59394_length_280_cov_1.587755_g51454_i0reverse_frame_1 - 0.075 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF327) RNA_Me_trans PF04252.13 NODE_59375_length_280_cov_1.808163_g51435_i0forward_frame_1 - 0.017 14.7 1.0 0.11 12.0 0.6 1.9 1 1 1 2 2 2 0 Predicted SAM-dependent RNA methyltransferase HSM3_C PF18794.1 NODE_59373_length_280_cov_1.955102_g51433_i0forward_frame_1 - 0.058 13.0 0.1 0.063 12.9 0.1 1.1 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain BNR_6 PF15899.5 NODE_59365_length_280_cov_2.110204_g51425_i0forward_frame_1 - 0.039 14.0 0.1 0.1 12.7 0.1 1.8 1 0 0 1 1 1 0 BNR-Asp box repeat DUF1425 PF07233.12 NODE_59359_length_280_cov_2.253061_g51419_i0reverse_frame_1 - 1.3e-21 76.3 0.0 1.5e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1425) XFP_N PF09364.10 NODE_59356_length_280_cov_2.310204_g51416_i0reverse_frame_1 - 0.11 11.2 0.1 0.13 11.1 0.1 1.1 1 0 0 1 1 1 0 XFP N-terminal domain DUF3565 PF12088.8 NODE_59349_length_280_cov_2.506122_g51409_i0forward_frame_1 - 0.48 10.4 2.6 8.4 6.4 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3565) NMD3 PF04981.13 NODE_59344_length_280_cov_2.795918_g51404_i0reverse_frame_1 - 0.00085 18.9 3.0 0.25 10.7 0.1 2.0 1 1 1 2 2 2 2 NMD3 family Mu-like_Com PF10122.9 NODE_59344_length_280_cov_2.795918_g51404_i0reverse_frame_1 - 0.017 14.6 2.3 1.7 8.1 0.0 2.3 2 0 0 2 2 2 0 Mu-like prophage protein Com DUF2711 PF10924.8 NODE_59344_length_280_cov_2.795918_g51404_i0reverse_frame_1 - 0.079 12.6 0.0 0.091 12.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2711) DUF35_N PF12172.8 NODE_59344_length_280_cov_2.795918_g51404_i0reverse_frame_1 - 0.088 12.7 1.8 1.5 8.8 0.0 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_2 PF13240.6 NODE_59344_length_280_cov_2.795918_g51404_i0reverse_frame_1 - 0.42 10.4 4.3 10 6.0 0.6 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Crystall_4 PF17945.1 NODE_59344_length_280_cov_2.795918_g51404_i0forward_frame_1 - 0.011 16.2 0.1 1.5 9.4 0.1 2.1 1 1 1 2 2 2 0 Beta/Gamma crystallin KdgT PF03812.13 NODE_59344_length_280_cov_2.795918_g51404_i0forward_frame_1 - 0.055 12.8 0.3 0.081 12.2 0.3 1.3 1 1 0 1 1 1 0 2-keto-3-deoxygluconate permease Toxin_8 PF07365.12 NODE_59329_length_280_cov_25.106122_g51389_i0reverse_frame_1 - 0.017 15.3 0.6 0.023 14.8 0.6 1.2 1 0 0 1 1 1 0 Alpha conotoxin precursor DUF5321 PF17254.2 NODE_59320_length_280_cov_43.359184_g51380_i0reverse_frame_1 - 5.5 6.4 13.2 6.6 6.1 10.2 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5321) Steroid_dh PF02544.16 NODE_59317_length_280_cov_47.175510_g51377_i0forward_frame_1 - 0.056 13.4 2.2 0.065 13.2 2.2 1.1 1 0 0 1 1 1 0 3-oxo-5-alpha-steroid 4-dehydrogenase Erf4 PF10256.9 NODE_59316_length_280_cov_55.036735_g51376_i0forward_frame_1 - 0.09 12.9 0.0 0.093 12.8 0.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family Soc PF16855.5 NODE_59303_length_280_cov_68.742857_g51363_i0reverse_frame_1 - 0.0078 16.7 0.5 0.028 14.9 0.1 1.9 1 1 0 2 2 2 1 Small outer capsid protein DUF4848 PF16140.5 NODE_59294_length_280_cov_83.036735_g51354_i0reverse_frame_1 - 0.029 13.9 0.4 0.036 13.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4848) Phage_ASH PF10554.9 NODE_59290_length_280_cov_104.461224_g51350_i0reverse_frame_1 - 0.1 13.0 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Ash protein family Gag_p19 PF02228.16 NODE_59288_length_280_cov_122.204082_g51348_i0reverse_frame_1 - 0.057 13.9 0.0 0.077 13.4 0.0 1.3 1 0 0 1 1 1 0 Major core protein p19 TMEM208_SND2 PF05620.11 NODE_59285_length_280_cov_150.338776_g51345_i0forward_frame_1 - 0.013 15.2 0.8 0.013 15.2 0.8 1.6 2 0 0 2 2 2 0 SRP-independent targeting protein 2/TMEM208 Vma12 PF11712.8 NODE_59285_length_280_cov_150.338776_g51345_i0forward_frame_1 - 2 8.5 5.7 1.3 9.1 3.8 1.7 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase RF3_C PF16658.5 NODE_59281_length_280_cov_177.538776_g51341_i0reverse_frame_1 - 0.064 13.1 0.0 0.072 12.9 0.0 1.1 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain Pathogen_betaC1 PF09593.10 NODE_59266_length_281_cov_1.313008_g51326_i0reverse_frame_1 - 0.0013 18.7 1.6 0.024 14.6 1.6 2.1 1 1 0 1 1 1 1 Beta-satellite pathogenicity beta C1 protein RBD PF02196.15 NODE_59266_length_281_cov_1.313008_g51326_i0reverse_frame_1 - 0.059 13.5 0.1 0.45 10.6 0.1 2.0 1 1 0 1 1 1 0 Raf-like Ras-binding domain HTH_37 PF13744.6 NODE_59242_length_281_cov_1.768293_g51302_i0forward_frame_1 - 0.16 11.9 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain ABC_tran PF00005.27 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 9.6e-15 55.3 0.0 1e-14 55.2 0.0 1.0 1 0 0 1 1 1 1 ABC transporter AAA_23 PF13476.6 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.00047 20.7 1.8 0.00059 20.4 1.8 1.5 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.002 17.8 0.6 0.0052 16.4 0.5 1.6 1 1 1 2 2 2 1 SRP54-type protein, GTPase domain MMR_HSR1 PF01926.23 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.0026 17.8 0.0 0.0029 17.7 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.0047 16.9 0.1 0.006 16.5 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase Roc PF08477.13 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.0071 16.6 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA_13 PF13166.6 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.068 11.8 0.0 0.072 11.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.092 13.2 0.2 0.1 13.0 0.2 1.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) FeoB_N PF02421.18 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.12 11.9 0.1 0.19 11.3 0.1 1.4 1 0 0 1 1 1 0 Ferrous iron transport protein B AAA_29 PF13555.6 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.16 11.7 0.5 0.31 10.8 0.5 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.2 11.4 0.1 0.22 11.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks252.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks252.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks252.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks252.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:09:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Humanin PF15040.6 NODE_59226_length_281_cov_2.012195_g51286_i0reverse_frame_1 - 0.072 12.5 1.7 0.13 11.7 1.7 1.4 1 0 0 1 1 1 0 Humanin family Pro_CA PF00484.19 NODE_59226_length_281_cov_2.012195_g51286_i0forward_frame_1 - 0.046 14.0 0.1 0.054 13.8 0.1 1.1 1 0 0 1 1 1 0 Carbonic anhydrase Col_cuticle_N PF01484.17 NODE_59215_length_281_cov_2.556911_g51275_i0reverse_frame_1 - 0.41 10.8 2.4 0.72 10.0 2.4 1.4 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain ESCRT-II PF05871.12 NODE_59214_length_281_cov_2.577236_g51274_i0forward_frame_1 - 0.097 12.9 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 ESCRT-II complex subunit Fim-adh_lectin PF09222.10 NODE_59206_length_281_cov_2.780488_g51266_i0reverse_frame_1 - 0.13 11.7 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 Fimbrial adhesin F17-AG, lectin domain CSM2 PF16834.5 NODE_59202_length_281_cov_3.126016_g51262_i0reverse_frame_1 - 0.071 12.7 0.6 0.092 12.4 0.4 1.4 1 1 0 1 1 1 0 Shu complex component Csm2, DNA-binding HEAT PF02985.22 NODE_59198_length_281_cov_3.398374_g51258_i0reverse_frame_1 - 1.5e-06 28.0 0.3 0.049 13.9 0.1 2.2 2 0 0 2 2 2 2 HEAT repeat Tti2 PF10521.9 NODE_59198_length_281_cov_3.398374_g51258_i0reverse_frame_1 - 0.0075 15.8 0.2 0.73 9.3 0.0 2.0 1 1 1 2 2 2 2 Tti2 family Vac14_Fab1_bd PF12755.7 NODE_59198_length_281_cov_3.398374_g51258_i0reverse_frame_1 - 0.053 14.1 0.4 0.13 12.9 0.3 1.7 1 1 1 2 2 2 0 Vacuolar 14 Fab1-binding region HEAT_2 PF13646.6 NODE_59198_length_281_cov_3.398374_g51258_i0reverse_frame_1 - 0.083 13.3 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 HEAT repeats CXCL17 PF15211.6 NODE_59195_length_281_cov_4.069106_g51255_i0forward_frame_1 - 0.017 15.9 3.1 0.017 15.9 3.1 2.1 1 1 1 2 2 2 0 VEGF co-regulated chemokine 1 CSS-motif PF12792.7 NODE_59192_length_281_cov_4.548780_g51252_i0forward_frame_1 - 8.9e-21 74.3 0.0 1e-20 74.2 0.0 1.0 1 0 0 1 1 1 1 CSS motif domain associated with EAL zf-CCHC_6 PF15288.6 NODE_59190_length_281_cov_5.345528_g51250_i0reverse_frame_1 - 0.044 13.6 0.8 0.088 12.7 0.8 1.6 1 0 0 1 1 1 0 Zinc knuckle TMEM239 PF15841.5 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_1 - 2.2 8.2 6.6 2.6 8.0 6.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family DUF5359 PF17313.2 NODE_59178_length_281_cov_67.601626_g51238_i0forward_frame_1 - 0.14 12.1 0.3 0.14 12.1 0.3 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5359) zf-C3HC4_4 PF15227.6 NODE_59169_length_281_cov_81.024390_g51229_i0reverse_frame_1 - 0.094 12.9 4.8 0.075 13.2 3.2 1.7 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING DUF4761 PF15958.5 NODE_59168_length_281_cov_83.666667_g51228_i0reverse_frame_1 - 0.16 12.1 0.0 0.26 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4761) FancD2 PF14631.6 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 2.7 5.3 12.5 2.9 5.2 12.5 1.0 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease Connexin PF00029.19 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 3.6 7.3 7.1 4.1 7.1 7.1 1.1 1 0 0 1 1 1 0 Connexin SR-25 PF10500.9 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 3.8 7.1 28.3 4.9 6.7 28.3 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Zip PF02535.22 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 5 6.2 7.3 5.4 6.1 7.3 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF1980 PF09323.10 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 7.9 6.4 9.8 8.3 6.3 9.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF4746 PF15928.5 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 0.81 9.0 12.1 0.87 8.9 12.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) PBP_sp32 PF07222.12 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 0.9 8.9 15.8 1.1 8.6 15.8 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Rhomboid_N PF12122.8 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 1.3 9.2 6.7 6.3 7.0 0.3 2.8 2 1 1 3 3 3 0 Cytoplasmic N-terminal domain of rhomboid serine protease PPL5 PF18168.1 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 4.3 6.6 10.1 4.3 6.6 10.1 1.2 1 0 0 1 1 1 0 Prim-pol family 5 FAM176 PF14851.6 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 9 5.9 14.4 12 5.5 14.4 1.3 1 1 0 1 1 1 0 FAM176 family RCC1_2 PF13540.6 NODE_59164_length_281_cov_116.186992_g51224_i0reverse_frame_1 - 1.9e-06 27.5 2.5 0.012 15.4 0.1 2.8 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_59164_length_281_cov_116.186992_g51224_i0reverse_frame_1 - 0.063 13.4 0.1 2.2 8.3 0.1 2.1 1 1 0 1 1 1 0 Uncharacterised ACR, YagE family COG1723 Nuc_N PF14448.6 NODE_59164_length_281_cov_116.186992_g51224_i0reverse_frame_1 - 0.13 12.2 3.1 13 5.7 0.0 3.2 2 1 1 3 3 3 0 Nuclease N terminal RESP18 PF14948.6 NODE_59163_length_281_cov_116.434959_g51223_i0reverse_frame_1 - 0.03 14.6 0.1 0.036 14.4 0.1 1.1 1 0 0 1 1 1 0 RESP18 domain Tmemb_185A PF10269.9 NODE_59162_length_281_cov_119.239837_g51222_i0forward_frame_1 - 0.015 15.0 1.8 0.017 14.8 1.8 1.0 1 0 0 1 1 1 0 Transmembrane Fragile-X-F protein IBN_N PF03810.19 NODE_59159_length_281_cov_125.995935_g51219_i0reverse_frame_1 - 0.011 15.7 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Importin-beta N-terminal domain THOC2_N PF16134.5 NODE_59158_length_281_cov_134.105691_g51218_i0forward_frame_1 - 0.054 12.1 0.0 0.064 11.9 0.0 1.1 1 0 0 1 1 1 0 THO complex subunit 2 N-terminus GramPos_pilinBB PF16569.5 NODE_59157_length_281_cov_138.837398_g51217_i0forward_frame_1 - 0.071 13.9 0.7 0.082 13.7 0.7 1.2 1 0 0 1 1 1 0 Gram-positive pilin backbone subunit 2, Cna-B-like domain DUF1410 PF07198.11 NODE_59157_length_281_cov_138.837398_g51217_i0forward_frame_1 - 0.079 13.5 0.0 0.1 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1410) AdoHcyase_NAD PF00670.21 NODE_59156_length_281_cov_146.967480_g51216_i0reverse_frame_1 - 0.055 13.5 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EF-hand_1 PF00036.32 NODE_59155_length_281_cov_148.743902_g51215_i0reverse_frame_1 - 0.11 12.1 0.4 0.29 10.8 0.1 1.7 2 0 0 2 2 2 0 EF hand MFS_1 PF07690.16 NODE_59139_length_282_cov_0.967611_g51199_i0reverse_frame_1 - 0.00051 19.1 3.5 0.00058 18.9 3.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily BH3 PF15285.6 NODE_59139_length_282_cov_0.967611_g51199_i0forward_frame_1 - 0.19 11.5 0.0 0.41 10.5 0.0 1.5 2 0 0 2 2 2 0 Beclin-1 BH3 domain, Bcl-2-interacting DUF1145 PF06611.12 NODE_59135_length_282_cov_1.129555_g51195_i0forward_frame_1 - 0.058 13.4 0.3 0.099 12.6 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1145) CMAS PF02353.20 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 3.7e-18 65.8 0.1 4.3e-18 65.6 0.1 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 4e-06 26.8 0.0 4.3e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 1.4e-05 25.7 0.0 1.7e-05 25.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 6.8e-05 23.5 0.0 8.8e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.00076 20.1 0.0 0.001 19.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Spermine_synth PF01564.17 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.015 14.7 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 Spermine/spermidine synthase domain Methyltransf_PK PF05891.12 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.037 13.5 0.1 0.043 13.3 0.1 1.0 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Methyltransf_31 PF13847.6 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.075 12.8 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Spore_II_R PF09551.10 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.083 13.4 0.0 0.097 13.1 0.0 1.2 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) DUF938 PF06080.12 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.12 12.1 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF938) LPD28 PF18843.1 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.14 11.8 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein associated domain 28 P53 PF00870.18 NODE_59127_length_282_cov_1.299595_g51187_i0reverse_frame_1 - 0.016 15.0 0.4 0.018 14.8 0.4 1.1 1 0 0 1 1 1 0 P53 DNA-binding domain PGBA_N PF15436.6 NODE_59117_length_282_cov_1.582996_g51177_i0reverse_frame_1 - 0.061 12.9 0.2 0.073 12.7 0.2 1.1 1 0 0 1 1 1 0 Plasminogen-binding protein pgbA N-terminal PH_8 PF15409.6 NODE_59117_length_282_cov_1.582996_g51177_i0reverse_frame_1 - 0.083 13.2 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain PNTB PF02233.16 NODE_59116_length_282_cov_1.607287_g51176_i0forward_frame_1 - 0.041 12.8 0.1 0.045 12.7 0.1 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit Adeno_E1B_55K PF01696.17 NODE_59113_length_282_cov_1.655870_g51173_i0forward_frame_1 - 0.088 11.5 0.0 0.12 11.0 0.0 1.2 1 0 0 1 1 1 0 Adenovirus EB1 55K protein / large t-antigen Milton PF12448.8 NODE_59107_length_282_cov_1.740891_g51167_i0reverse_frame_1 - 0.004 17.3 0.3 0.0048 17.0 0.3 1.1 1 0 0 1 1 1 1 Kinesin associated protein Flu_M2 PF00599.17 NODE_59105_length_282_cov_1.769231_g51165_i0forward_frame_1 - 0.18 11.9 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Influenza Matrix protein (M2) Zemlya PF17646.1 NODE_59092_length_282_cov_2.064777_g51152_i0reverse_frame_1 - 0.088 13.2 0.3 0.098 13.0 0.3 1.0 1 0 0 1 1 1 0 Closterovirus 1a polyprotein central region DUF588 PF04535.12 NODE_59091_length_282_cov_2.101215_g51151_i0reverse_frame_1 - 0.0073 16.1 0.7 0.0083 15.9 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF588) HPS6 PF15702.5 NODE_59091_length_282_cov_2.101215_g51151_i0reverse_frame_1 - 0.036 12.1 0.1 0.041 11.9 0.1 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein DUF4525 PF15027.6 NODE_59086_length_282_cov_2.259109_g51146_i0forward_frame_1 - 0.14 11.9 0.3 0.18 11.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) Strumpellin PF10266.9 NODE_59085_length_282_cov_2.267206_g51145_i0forward_frame_1 - 8.5e-06 23.8 0.0 9.1e-06 23.7 0.0 1.0 1 0 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin Filament PF00038.21 NODE_59085_length_282_cov_2.267206_g51145_i0forward_frame_1 - 0.12 12.0 0.0 0.14 11.7 0.0 1.0 1 0 0 1 1 1 0 Intermediate filament protein DUF682 PF05081.12 NODE_59083_length_282_cov_2.271255_g51143_i0reverse_frame_1 - 0.088 12.5 1.5 0.11 12.3 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF682) DUF1190 PF06693.11 NODE_59081_length_282_cov_2.303644_g51141_i0forward_frame_1 - 3.6e-24 86.0 5.5 3.8e-24 85.9 5.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1190) Pex24p PF06398.11 NODE_59063_length_282_cov_2.716599_g51123_i0reverse_frame_1 - 0.011 14.8 0.5 0.014 14.4 0.1 1.3 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin FTR PF01913.18 NODE_59053_length_282_cov_3.392713_g51113_i0reverse_frame_1 - 0.027 14.4 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase DUF3439 PF11921.8 NODE_59049_length_282_cov_4.473684_g51109_i0forward_frame_1 - 0.054 13.5 5.0 0.061 13.3 5.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) KCNQC3-Ank-G_bd PF11956.8 NODE_59046_length_282_cov_7.311741_g51106_i0reverse_frame_1 - 0.012 15.8 0.5 0.016 15.5 0.5 1.2 1 0 0 1 1 1 0 Ankyrin-G binding motif of KCNQ2-3 Peptidase_M64 PF09471.10 NODE_59031_length_282_cov_58.979757_g51091_i0forward_frame_1 - 0.013 15.1 0.4 0.013 15.1 0.4 1.1 1 0 0 1 1 1 0 IgA Peptidase M64 Histone_H2A_C PF16211.5 NODE_59030_length_282_cov_61.668016_g51090_i0reverse_frame_1 - 1.2 8.9 4.8 0.39 10.5 2.2 1.6 2 0 0 2 2 2 0 C-terminus of histone H2A Gyro_capsid PF04162.12 NODE_59026_length_282_cov_65.497976_g51086_i0forward_frame_1 - 1.6 7.1 4.2 1.9 6.9 4.2 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) Ank_4 PF13637.6 NODE_59016_length_282_cov_85.327935_g51076_i0forward_frame_1 - 6.9e-15 55.2 0.0 3.4e-08 33.9 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_59016_length_282_cov_85.327935_g51076_i0forward_frame_1 - 6.1e-13 48.6 0.5 1.9e-05 24.9 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_2 PF12796.7 NODE_59016_length_282_cov_85.327935_g51076_i0forward_frame_1 - 3.8e-12 46.6 0.0 9.8e-12 45.3 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_59016_length_282_cov_85.327935_g51076_i0forward_frame_1 - 1.4e-09 38.0 1.2 5.3e-06 26.6 0.2 2.8 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_59016_length_282_cov_85.327935_g51076_i0forward_frame_1 - 8.9e-08 31.8 0.1 0.0033 17.8 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat KHA PF11834.8 NODE_59016_length_282_cov_85.327935_g51076_i0forward_frame_1 - 0.11 12.6 0.1 0.33 11.1 0.0 1.8 2 0 0 2 2 2 0 KHA, dimerisation domain of potassium ion channel SR-25 PF10500.9 NODE_59012_length_282_cov_107.068826_g51072_i0forward_frame_1 - 0.064 12.9 7.0 0.073 12.7 7.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein zf-HC3 PF16827.5 NODE_59002_length_282_cov_177.093117_g51062_i0forward_frame_1 - 0.06 13.6 0.1 0.13 12.5 0.0 1.6 2 0 0 2 2 2 0 zinc-finger Ig_GlcNase PF18368.1 NODE_59001_length_282_cov_219.728745_g51061_i0reverse_frame_1 - 0.16 12.1 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Exo-beta-D-glucosaminidase Ig-fold domain Cobl PF09469.10 NODE_58998_length_282_cov_252.878543_g51058_i0forward_frame_1 - 0.12 12.7 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Cordon-bleu ubiquitin-like domain PDZ_1 PF12812.7 NODE_58994_length_282_cov_445.510121_g51055_i0reverse_frame_1 - 0.093 12.8 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 PDZ-like domain Arteri_Gl PF00951.18 NODE_58990_length_283_cov_1.044355_g51051_i0forward_frame_2 - 0.049 13.4 0.1 0.085 12.7 0.0 1.5 1 1 1 2 2 2 0 Arterivirus GL envelope glycoprotein TP2 PF01254.18 NODE_58984_length_283_cov_1.290323_g51045_i0reverse_frame_2 - 0.053 14.1 3.4 0.065 13.8 3.4 1.0 1 0 0 1 1 1 0 Nuclear transition protein 2 SelP_N PF04592.14 NODE_58984_length_283_cov_1.290323_g51045_i0forward_frame_3 - 0.092 12.1 3.9 0.1 12.0 3.9 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Cpn60_TCP1 PF00118.24 NODE_58983_length_283_cov_1.290323_g51044_i0forward_frame_3 - 7.6e-23 80.9 0.1 8e-23 80.8 0.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF1560 PF07597.11 NODE_58982_length_283_cov_1.302419_g51043_i0reverse_frame_3 - 0.065 13.3 0.5 0.065 13.3 0.5 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1560) Orf78 PF06024.12 NODE_58980_length_283_cov_1.370968_g51041_i0reverse_frame_2 - 0.12 12.7 0.4 0.19 12.1 0.3 1.4 1 1 0 1 1 1 0 Orf78 (ac78) Hum_adeno_E3A PF05393.11 NODE_58980_length_283_cov_1.370968_g51041_i0forward_frame_3 - 1.3 9.0 6.3 0.96 9.5 2.0 1.9 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein NinE PF05322.11 NODE_58974_length_283_cov_1.491935_g51035_i0forward_frame_3 - 0.0014 18.5 1.6 0.0018 18.1 1.6 1.3 1 0 0 1 1 1 1 NINE Protein MttA_Hcf106 PF02416.16 NODE_58972_length_283_cov_1.512097_g51033_i0reverse_frame_2 - 0.051 12.9 0.1 1.8 8.0 0.0 2.2 2 0 0 2 2 2 0 mttA/Hcf106 family SERTA PF06031.13 NODE_58968_length_283_cov_1.564516_g51029_i0reverse_frame_2 - 0.91 9.2 5.8 1.6 8.4 0.2 2.9 3 0 0 3 3 3 0 SERTA motif Fanconi_A_N PF15865.5 NODE_58965_length_283_cov_1.612903_g51026_i0reverse_frame_3 - 0.0067 15.9 0.1 0.0079 15.6 0.1 1.1 1 0 0 1 1 1 1 Fanconi anaemia group A protein N terminus Saf_2TM PF18303.1 NODE_58965_length_283_cov_1.612903_g51026_i0reverse_frame_2 - 0.027 14.1 0.1 0.029 14.0 0.1 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain DUF2188 PF09954.9 NODE_58964_length_283_cov_1.616935_g51025_i0forward_frame_2 - 0.021 14.9 0.0 0.036 14.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2188) Nucleoporin_FG PF13634.6 NODE_58961_length_283_cov_1.766129_g51022_i0forward_frame_2 - 1.8 9.5 24.8 9.8 7.1 24.8 1.9 1 1 0 1 1 1 0 Nucleoporin FG repeat region OrgA_MxiK PF09482.10 NODE_58958_length_283_cov_1.782258_g51019_i0forward_frame_2 - 0.047 13.6 0.2 0.077 12.9 0.2 1.6 1 1 0 1 1 1 0 Bacterial type III secretion apparatus protein (OrgA_MxiK) FHA PF00498.26 NODE_58955_length_283_cov_1.854839_g51016_i0reverse_frame_2 - 0.1 13.0 0.0 0.28 11.5 0.0 1.7 2 0 0 2 2 2 0 FHA domain Kinesin_assoc PF16183.5 NODE_58954_length_283_cov_1.895161_g51015_i0forward_frame_3 - 3.2e-05 24.2 0.1 4.7e-05 23.6 0.1 1.2 1 0 0 1 1 1 1 Kinesin-associated Caldesmon PF02029.15 NODE_58954_length_283_cov_1.895161_g51015_i0forward_frame_3 - 0.0017 17.2 2.3 0.0019 17.1 2.3 1.1 1 0 0 1 1 1 1 Caldesmon MCM_lid PF17855.1 NODE_58950_length_283_cov_1.971774_g51011_i0reverse_frame_3 - 3e-16 59.6 0.0 3.6e-16 59.3 0.0 1.1 1 0 0 1 1 1 1 MCM AAA-lid domain Phage_int_SAM_5 PF13102.6 NODE_58950_length_283_cov_1.971774_g51011_i0reverse_frame_3 - 0.08 13.3 0.2 0.096 13.0 0.2 1.4 1 1 0 1 1 1 0 Phage integrase SAM-like domain DUF2255 PF10012.9 NODE_58950_length_283_cov_1.971774_g51011_i0reverse_frame_3 - 0.15 12.2 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2255) DUF3447 PF11929.8 NODE_58949_length_283_cov_1.991935_g51010_i0forward_frame_3 - 0.019 14.9 0.3 0.019 14.9 0.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3447) RVT_1 PF00078.27 NODE_58947_length_283_cov_2.040323_g51008_i0forward_frame_2 - 0.0038 16.8 0.0 0.0041 16.7 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) zf-RVT PF13966.6 NODE_58946_length_283_cov_2.040323_g51007_i0forward_frame_2 - 0.022 15.5 0.9 0.037 14.7 0.9 1.4 1 0 0 1 1 1 0 zinc-binding in reverse transcriptase O-ag_pol_Wzy PF14296.6 NODE_58943_length_283_cov_2.141129_g51004_i0forward_frame_3 - 0.067 11.8 1.1 0.1 11.2 1.1 1.2 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy Chitin_synth_2 PF03142.15 NODE_58941_length_283_cov_2.153226_g51002_i0forward_frame_2 - 0.00029 19.6 0.1 0.0003 19.5 0.1 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 NODE_58941_length_283_cov_2.153226_g51002_i0forward_frame_2 - 0.00036 20.5 0.1 0.00037 20.5 0.1 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 NODE_58941_length_283_cov_2.153226_g51002_i0forward_frame_2 - 0.0088 16.0 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 HSP70 PF00012.20 NODE_58939_length_283_cov_2.173387_g51000_i0reverse_frame_3 - 8.8e-07 27.5 0.0 9.7e-07 27.3 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein RAP PF08373.10 NODE_58937_length_283_cov_2.258065_g50998_i0reverse_frame_2 - 0.049 13.7 3.9 0.23 11.6 1.5 2.7 1 1 1 2 2 2 0 RAP domain DUF4498 PF14926.6 NODE_58932_length_283_cov_2.379032_g50993_i0forward_frame_2 - 0.029 13.7 0.1 0.04 13.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4498) Ion_trans_2 PF07885.16 NODE_58930_length_283_cov_2.491935_g50991_i0forward_frame_3 - 3.3e-13 49.4 4.0 3.3e-13 49.4 4.0 1.1 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 NODE_58930_length_283_cov_2.491935_g50991_i0forward_frame_3 - 3.2e-08 33.1 1.9 3.2e-08 33.1 1.9 1.0 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 NODE_58930_length_283_cov_2.491935_g50991_i0forward_frame_3 - 0.0011 18.8 0.8 0.0014 18.5 0.8 1.2 1 0 0 1 1 1 1 Ligand-gated ion channel Calc_CGRP_IAPP PF00214.19 NODE_58909_length_283_cov_3.572581_g50970_i0forward_frame_2 - 0.034 14.5 0.0 0.035 14.4 0.0 1.2 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family IGR PF09597.10 NODE_58909_length_283_cov_3.572581_g50970_i0forward_frame_2 - 0.11 12.6 0.3 0.17 12.0 0.3 1.3 1 0 0 1 1 1 0 IGR protein motif Tme5_EGF_like PF09064.10 NODE_58907_length_283_cov_3.725806_g50968_i0forward_frame_3 - 0.0039 17.0 7.8 0.012 15.5 2.9 2.9 3 0 0 3 3 3 1 Thrombomodulin like fifth domain, EGF-like DUF2315 PF10231.9 NODE_58901_length_283_cov_5.955645_g50962_i0forward_frame_2 - 0.39 10.8 5.9 0.5 10.5 5.9 1.1 1 0 0 1 1 1 0 Apoptogenic protein 1 RGS12_us2 PF16611.5 NODE_58900_length_283_cov_13.274194_g50961_i0forward_frame_2 - 0.05 14.0 0.1 0.078 13.4 0.1 1.2 1 0 0 1 1 1 0 Unstructured region between RBD and GoLoco Ephrin_rec_like PF07699.13 NODE_58894_length_283_cov_43.354839_g50955_i0reverse_frame_3 - 9.3e-06 25.3 8.0 0.0037 17.0 2.9 2.4 1 1 1 2 2 2 2 Putative ephrin-receptor like Hyd_WA PF06462.12 NODE_58894_length_283_cov_43.354839_g50955_i0forward_frame_3 - 0.25 11.4 2.1 7.5 6.6 0.1 2.3 2 0 0 2 2 2 0 Propeller EOS1 PF12326.8 NODE_58890_length_283_cov_51.891129_g50951_i0forward_frame_3 - 0.24 11.3 1.0 0.26 11.2 1.0 1.1 1 0 0 1 1 1 0 N-glycosylation protein Tmemb_14 PF03647.13 NODE_58889_length_283_cov_52.427419_g50950_i0forward_frame_2 - 1.7e-10 41.5 2.5 2.2e-10 41.1 2.5 1.1 1 0 0 1 1 1 1 Transmembrane proteins 14C DUF2369 PF10179.9 NODE_58888_length_283_cov_53.020161_g50949_i0forward_frame_3 - 0.05 14.0 0.5 0.061 13.7 0.5 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2369) SRP72 PF08492.12 NODE_58888_length_283_cov_53.020161_g50949_i0forward_frame_3 - 0.19 12.2 5.0 0.28 11.6 4.9 1.5 1 1 0 1 1 1 0 SRP72 RNA-binding domain zf-RanBP PF00641.18 NODE_58887_length_283_cov_53.048387_g50948_i0forward_frame_2 - 2.7e-07 29.8 1.2 3.6e-07 29.4 1.2 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others Vps36-NZF-N PF16988.5 NODE_58887_length_283_cov_53.048387_g50948_i0forward_frame_2 - 0.47 9.9 3.1 1.5 8.3 3.1 1.8 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Pinin_SDK_memA PF04696.13 NODE_58885_length_283_cov_56.939516_g50946_i0reverse_frame_3 - 0.042 13.9 5.5 0.049 13.7 5.5 1.1 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region NPCC PF08058.11 NODE_58885_length_283_cov_56.939516_g50946_i0forward_frame_3 - 0.78 9.8 6.0 0.96 9.5 6.0 1.1 1 0 0 1 1 1 0 Nuclear pore complex component DHHC PF01529.20 NODE_58885_length_283_cov_56.939516_g50946_i0forward_frame_3 - 8 6.6 15.2 10 6.3 15.2 1.0 1 0 0 1 1 1 0 DHHC palmitoyltransferase Spec3 PF15795.5 NODE_58882_length_283_cov_62.358871_g50943_i0reverse_frame_2 - 1.8e-07 31.6 3.6 2.6e-07 31.1 3.6 1.3 1 0 0 1 1 1 1 Ectodermal ciliogenesis protein Ribosomal_L11_N PF03946.14 NODE_58881_length_283_cov_62.403226_g50942_i0reverse_frame_3 - 0.11 12.3 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11, N-terminal domain fn3_2 PF16893.5 NODE_58867_length_283_cov_103.540323_g50928_i0reverse_frame_2 - 0.0091 16.1 0.1 0.011 15.9 0.1 1.3 1 0 0 1 1 1 1 Fibronectin type III domain MecA_N PF05223.11 NODE_58867_length_283_cov_103.540323_g50928_i0reverse_frame_2 - 0.029 14.6 0.2 0.044 14.0 0.2 1.3 1 0 0 1 1 1 0 NTF2-like N-terminal transpeptidase domain PalH PF08733.10 NODE_58867_length_283_cov_103.540323_g50928_i0forward_frame_2 - 2.4 7.1 12.7 2.5 7.0 12.7 1.0 1 0 0 1 1 1 0 PalH/RIM21 Erv26 PF04148.13 NODE_58866_length_283_cov_103.633065_g50927_i0forward_frame_3 - 0.00067 19.5 0.7 0.00071 19.5 0.7 1.0 1 0 0 1 1 1 1 Transmembrane adaptor Erv26 End3 PF12761.7 NODE_58865_length_283_cov_106.625000_g50926_i0reverse_frame_2 - 0.006 16.8 0.2 0.0066 16.6 0.2 1.0 1 0 0 1 1 1 1 Actin cytoskeleton-regulatory complex protein END3 Amnionless PF14828.6 NODE_58851_length_284_cov_0.951807_g50912_i0reverse_frame_3 - 0.76 8.5 2.4 0.77 8.5 2.4 1.1 1 0 0 1 1 1 0 Amnionless RIFIN PF02009.16 NODE_58851_length_284_cov_0.951807_g50912_i0reverse_frame_3 - 2.9 7.7 4.8 3.6 7.4 4.8 1.1 1 0 0 1 1 1 0 Rifin PBP3 PF18056.1 NODE_58851_length_284_cov_0.951807_g50912_i0forward_frame_2 - 1.3 9.2 6.2 0.51 10.5 1.0 2.0 2 0 0 2 2 2 0 Penicillin Binding Protein 3 Domain DUF4653 PF15546.6 NODE_58850_length_284_cov_0.963855_g50911_i0reverse_frame_3 - 0.12 11.9 0.4 0.15 11.7 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4653) DUF365 PF04033.12 NODE_58845_length_284_cov_1.313253_g50906_i0reverse_frame_3 - 0.02 15.1 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF365) SeqA_N PF17206.3 NODE_58845_length_284_cov_1.313253_g50906_i0forward_frame_2 - 1.1 8.7 2.8 0.43 9.9 0.2 1.7 2 0 0 2 2 2 0 SeqA protein N-terminal domain CDC45 PF02724.14 NODE_58840_length_284_cov_1.397590_g50901_i0forward_frame_2 - 0.0081 14.5 3.1 0.0092 14.3 3.1 1.0 1 0 0 1 1 1 1 CDC45-like protein PIG-H PF10181.9 NODE_58838_length_284_cov_1.405622_g50899_i0reverse_frame_3 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 GPI-GlcNAc transferase complex, PIG-H component Pkinase PF00069.25 NODE_58838_length_284_cov_1.405622_g50899_i0reverse_frame_2 - 7.9e-26 91.0 0.0 8.7e-26 90.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58838_length_284_cov_1.405622_g50899_i0reverse_frame_2 - 5.7e-13 48.7 0.1 6.1e-13 48.7 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_58838_length_284_cov_1.405622_g50899_i0reverse_frame_2 - 0.036 13.4 0.0 0.052 12.9 0.0 1.3 1 1 0 1 1 1 0 Kinase-like Inos-1-P_synth PF01658.17 NODE_58834_length_284_cov_1.429719_g50895_i0reverse_frame_2 - 0.0087 16.3 0.5 0.011 16.0 0.5 1.0 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase Myb_DNA-bind_7 PF15963.5 NODE_58833_length_284_cov_1.445783_g50894_i0reverse_frame_2 - 0.036 14.0 4.8 0.046 13.6 4.4 1.3 1 1 0 1 1 1 0 Myb DNA-binding like TMEM119 PF15724.5 NODE_58832_length_284_cov_1.457831_g50893_i0reverse_frame_2 - 2 8.4 3.2 2.1 8.4 3.2 1.2 1 0 0 1 1 1 0 TMEM119 family LAM_C PF12544.8 NODE_58825_length_284_cov_1.626506_g50886_i0forward_frame_3 - 0.017 15.3 1.7 0.022 14.9 1.7 1.1 1 0 0 1 1 1 0 Lysine-2,3-aminomutase ORC_WH_C PF18137.1 NODE_58825_length_284_cov_1.626506_g50886_i0forward_frame_3 - 0.12 12.5 2.4 0.18 11.9 2.4 1.3 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal DUF5401 PF17380.2 NODE_58823_length_284_cov_1.670683_g50884_i0reverse_frame_2 - 0.041 12.0 0.0 0.041 12.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) SP_C-Propep PF08999.10 NODE_58823_length_284_cov_1.670683_g50884_i0forward_frame_3 - 0.029 14.1 0.4 0.039 13.7 0.4 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide SBP_bac_5 PF00496.22 NODE_58821_length_284_cov_1.686747_g50882_i0reverse_frame_3 - 9e-22 77.5 0.6 9.6e-22 77.4 0.6 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle GSG-1 PF07803.11 NODE_58819_length_284_cov_1.706827_g50880_i0forward_frame_3 - 0.05 13.5 0.3 0.068 13.1 0.2 1.4 1 1 0 1 1 1 0 GSG1-like protein C2 PF00168.30 NODE_58817_length_284_cov_1.799197_g50878_i0reverse_frame_2 - 0.036 14.4 0.0 0.072 13.4 0.0 1.5 1 0 0 1 1 1 0 C2 domain UEV PF05743.13 NODE_58817_length_284_cov_1.799197_g50878_i0forward_frame_2 - 0.056 13.3 0.2 0.071 13.0 0.2 1.2 1 0 0 1 1 1 0 UEV domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks253.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks253.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks253.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks253.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CDT1 PF08839.11 NODE_58816_length_284_cov_1.875502_g50877_i0reverse_frame_2 - 4.7e-07 30.3 0.1 5.2e-07 30.1 0.1 1.1 1 0 0 1 1 1 1 DNA replication factor CDT1 like DUF5592 PF17332.2 NODE_58815_length_284_cov_1.883534_g50876_i0forward_frame_2 - 4.2 8.0 12.0 0.43 11.2 6.8 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5592) TSGA13 PF14994.6 NODE_58814_length_284_cov_1.903614_g50875_i0forward_frame_2 - 0.048 13.0 0.1 0.053 12.9 0.1 1.1 1 0 0 1 1 1 0 Testis-specific gene 13 protein Methyltransf_30 PF05430.11 NODE_58813_length_284_cov_1.911647_g50874_i0forward_frame_2 - 1.9e-18 66.5 0.3 2.3e-18 66.2 0.3 1.1 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Pkinase_Tyr PF07714.17 NODE_58811_length_284_cov_2.020080_g50872_i0forward_frame_3 - 2e-06 27.3 0.0 2.7e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_58811_length_284_cov_2.020080_g50872_i0forward_frame_3 - 2e-05 24.1 0.0 2.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase PF00069.25 NODE_58811_length_284_cov_2.020080_g50872_i0forward_frame_2 - 3.8e-10 39.6 0.0 3.9e-10 39.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58811_length_284_cov_2.020080_g50872_i0forward_frame_2 - 0.003 16.9 0.0 0.0037 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3176 PF11374.8 NODE_58806_length_284_cov_2.140562_g50867_i0reverse_frame_3 - 0.16 12.2 0.7 2.1 8.6 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3176) TMEM171 PF15471.6 NODE_58806_length_284_cov_2.140562_g50867_i0forward_frame_2 - 0.7 8.8 4.3 0.87 8.5 4.3 1.2 1 0 0 1 1 1 0 Transmembrane protein family 171 DSX_dimer PF08828.10 NODE_58803_length_284_cov_2.321285_g50864_i0reverse_frame_3 - 0.0094 15.6 1.2 0.013 15.1 1.2 1.3 1 0 0 1 1 1 1 Doublesex dimerisation domain DRAT PF07357.11 NODE_58801_length_284_cov_2.325301_g50862_i0reverse_frame_2 - 0.023 13.9 0.4 0.027 13.7 0.4 1.1 1 0 0 1 1 1 0 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) CDV3 PF15359.6 NODE_58799_length_284_cov_2.401606_g50860_i0reverse_frame_2 - 0.068 13.7 7.2 0.087 13.3 7.2 1.1 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 TT_ORF1 PF02956.14 NODE_58799_length_284_cov_2.401606_g50860_i0reverse_frame_2 - 2.8 6.5 6.6 2.8 6.5 6.6 1.0 1 0 0 1 1 1 0 TT viral orf 1 RGI1 PF10843.8 NODE_58797_length_284_cov_2.457831_g50858_i0reverse_frame_3 - 0.64 9.6 4.1 4.4 6.9 0.0 2.0 2 0 0 2 2 2 0 Respiratory growth induced protein 1 SR-25 PF10500.9 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_3 - 0.21 11.2 9.5 0.24 11.0 9.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_3 - 0.3 11.8 6.8 0.38 11.5 6.8 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF3357 PF11837.8 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_3 - 9.5 6.7 11.8 16 6.0 11.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3357) DUF4614 PF15391.6 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_2 - 0.3 11.1 6.0 0.31 11.0 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) SR-25 PF10500.9 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_2 - 2.3 7.8 15.1 2.4 7.7 15.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HTH_8 PF02954.19 NODE_58795_length_284_cov_2.485944_g50856_i0forward_frame_2 - 1.6e-10 40.6 0.9 2.5e-10 39.9 0.9 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family Yeast_MT PF11403.8 NODE_58794_length_284_cov_2.538153_g50855_i0forward_frame_2 - 0.11 13.0 4.6 0.11 13.0 4.6 1.7 2 0 0 2 2 2 0 Yeast metallothionein zf-RanBP PF00641.18 NODE_58793_length_284_cov_2.554217_g50854_i0forward_frame_3 - 0.083 12.2 0.5 0.14 11.5 0.5 1.4 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others SDH_C PF18317.1 NODE_58792_length_284_cov_2.558233_g50853_i0reverse_frame_2 - 0.15 11.9 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Shikimate 5'-dehydrogenase C-terminal domain Phage_glycop_gL PF11108.8 NODE_58789_length_284_cov_2.638554_g50850_i0forward_frame_3 - 0.043 13.9 0.1 0.045 13.8 0.1 1.2 1 0 0 1 1 1 0 Viral glycoprotein L IP_trans PF02121.18 NODE_58788_length_284_cov_2.654618_g50849_i0reverse_frame_3 - 0.015 14.9 0.2 0.017 14.7 0.2 1.2 1 0 0 1 1 1 0 Phosphatidylinositol transfer protein SlpA PF03217.14 NODE_58788_length_284_cov_2.654618_g50849_i0reverse_frame_2 - 0.0027 18.2 0.6 0.0056 17.2 0.6 1.5 1 0 0 1 1 1 1 Surface later protein A domain Syntaxin-6_N PF09177.11 NODE_58788_length_284_cov_2.654618_g50849_i0reverse_frame_2 - 0.19 12.3 3.9 0.29 11.7 3.9 1.4 1 1 0 1 1 1 0 Syntaxin 6, N-terminal SRCR PF00530.18 NODE_58785_length_284_cov_2.755020_g50846_i0forward_frame_2 - 0.092 13.3 0.0 0.14 12.7 0.0 1.4 1 1 0 1 1 1 0 Scavenger receptor cysteine-rich domain PTCRA PF15028.6 NODE_58784_length_284_cov_2.791165_g50845_i0reverse_frame_2 - 0.15 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Pre-T-cell antigen receptor Pertactin PF03212.14 NODE_58780_length_284_cov_3.132530_g50841_i0forward_frame_2 - 5.3e-24 84.5 0.6 6e-24 84.3 0.6 1.0 1 0 0 1 1 1 1 Pertactin DUF2101 PF09874.9 NODE_58777_length_284_cov_3.325301_g50838_i0reverse_frame_3 - 4.2 7.0 13.3 4.8 6.8 13.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) GlcV_C_terminal PF17847.1 NODE_58777_length_284_cov_3.325301_g50838_i0reverse_frame_2 - 0.082 13.4 0.2 0.13 12.7 0.2 1.3 1 0 0 1 1 1 0 Glucose ABC transporter C-terminal domain DUF1700 PF08006.11 NODE_58777_length_284_cov_3.325301_g50838_i0forward_frame_3 - 0.37 10.3 10.9 0.41 10.2 10.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF962 PF06127.11 NODE_58777_length_284_cov_3.325301_g50838_i0forward_frame_3 - 0.58 10.3 6.1 0.9 9.7 6.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DUF2207 PF09972.9 NODE_58777_length_284_cov_3.325301_g50838_i0forward_frame_3 - 2.9 6.6 8.7 2.9 6.5 8.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) LRR_RI_capping PF18779.1 NODE_58776_length_284_cov_3.341365_g50837_i0reverse_frame_3 - 0.14 11.8 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Capping Ribonuclease inhibitor Leucine Rich Repeat Complex1_30kDa PF00329.19 NODE_58775_length_284_cov_3.417671_g50836_i0forward_frame_3 - 5.3e-17 62.6 0.0 5.6e-17 62.5 0.0 1.0 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DUF1979 PF09322.10 NODE_58775_length_284_cov_3.417671_g50836_i0forward_frame_2 - 0.072 13.0 0.2 0.1 12.5 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1979) PKK PF12474.8 NODE_58774_length_284_cov_4.028112_g50835_i0reverse_frame_3 - 0.085 13.0 3.9 0.12 12.5 3.9 1.2 1 0 0 1 1 1 0 Polo kinase kinase Orthopox_A36R PF05950.11 NODE_58772_length_284_cov_7.144578_g50833_i0forward_frame_3 - 0.075 13.2 0.0 0.079 13.1 0.0 1.2 1 0 0 1 1 1 0 Orthopoxvirus A36R protein DUF1356 PF07092.12 NODE_58772_length_284_cov_7.144578_g50833_i0forward_frame_2 - 0.05 12.9 0.0 0.073 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) zf-LITAF-like PF10601.9 NODE_58771_length_284_cov_8.353414_g50832_i0reverse_frame_2 - 1.2e-05 25.5 10.5 1.7e-05 25.0 10.5 1.3 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain NDUFV3 PF15880.5 NODE_58767_length_284_cov_39.570281_g50828_i0reverse_frame_2 - 0.055 13.5 0.5 0.75 9.9 0.1 2.1 2 0 0 2 2 2 0 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial Serpulina_VSP PF05540.11 NODE_58763_length_284_cov_49.658635_g50824_i0forward_frame_3 - 0.021 13.9 0.1 0.023 13.8 0.1 1.0 1 0 0 1 1 1 0 Serpulina hyodysenteriae variable surface protein m_DGTX_Dc1a_b_c PF17491.2 NODE_58760_length_284_cov_59.542169_g50821_i0forward_frame_3 - 0.72 10.5 4.8 0.62 10.7 2.5 2.0 2 0 0 2 2 2 0 Spider Toxins mu-diguetoxin-1 a, b and c HTH_21 PF13276.6 NODE_58757_length_284_cov_69.100402_g50818_i0reverse_frame_2 - 0.036 14.2 0.0 0.082 13.1 0.0 1.5 1 0 0 1 1 1 0 HTH-like domain DUF2883 PF11097.8 NODE_58756_length_284_cov_70.257028_g50817_i0forward_frame_3 - 0.0059 16.7 0.1 0.019 15.1 0.0 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF2883) LRRNT_2 PF08263.12 NODE_58756_length_284_cov_70.257028_g50817_i0forward_frame_2 - 0.074 13.4 1.3 0.12 12.7 1.3 1.4 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain Vma12 PF11712.8 NODE_58754_length_284_cov_75.281124_g50815_i0forward_frame_3 - 0.14 12.2 0.1 0.18 11.9 0.1 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase PARP PF00644.20 NODE_58747_length_284_cov_93.751004_g50808_i0forward_frame_3 - 2e-11 43.9 0.0 2.7e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain WD40 PF00400.32 NODE_58741_length_284_cov_165.285141_g50802_i0reverse_frame_2 - 9.4e-11 42.1 0.5 0.00037 21.2 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_58741_length_284_cov_165.285141_g50802_i0reverse_frame_2 - 6.9e-05 23.1 0.0 8.1e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Cytochrom_D1 PF02239.16 NODE_58741_length_284_cov_165.285141_g50802_i0reverse_frame_2 - 0.0009 17.9 0.0 0.0011 17.6 0.0 1.1 1 0 0 1 1 1 1 Cytochrome D1 heme domain eIF2A PF08662.11 NODE_58741_length_284_cov_165.285141_g50802_i0reverse_frame_2 - 0.02 14.8 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 NODE_58741_length_284_cov_165.285141_g50802_i0reverse_frame_2 - 0.026 13.9 0.0 0.029 13.7 0.0 1.1 1 0 0 1 1 1 0 WD40-like domain OAD_beta PF03977.13 NODE_58741_length_284_cov_165.285141_g50802_i0forward_frame_3 - 0.02 13.9 0.1 0.021 13.8 0.1 1.0 1 0 0 1 1 1 0 Na+-transporting oxaloacetate decarboxylase beta subunit ImpA_N PF06812.12 NODE_58739_length_284_cov_172.168675_g50800_i0reverse_frame_2 - 0.17 12.0 0.0 0.31 11.2 0.0 1.4 2 0 0 2 2 2 0 ImpA, N-terminal, type VI secretion system TLP-20 PF06088.11 NODE_58731_length_284_cov_799.116466_g50792_i0reverse_frame_3 - 0.063 13.2 3.9 0.07 13.0 3.9 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) PH_17 PF18012.1 NODE_58724_length_285_cov_1.340000_g50785_i0reverse_frame_2 - 0.41 10.4 5.2 1.7 8.4 3.3 2.3 1 1 1 2 2 2 0 PH domain Acyltransferase PF01553.21 NODE_58724_length_285_cov_1.340000_g50785_i0forward_frame_3 - 0.038 13.6 0.1 0.05 13.2 0.1 1.2 1 0 0 1 1 1 0 Acyltransferase AWS PF17907.1 NODE_58724_length_285_cov_1.340000_g50785_i0forward_frame_2 - 0.038 14.0 0.5 0.038 14.0 0.5 1.6 2 0 0 2 2 2 0 AWS domain Cornifin PF02389.15 NODE_58721_length_285_cov_1.376000_g50782_i0reverse_frame_2 - 1e-05 25.7 18.8 1.4e-05 25.3 18.8 1.2 1 0 0 1 1 1 1 Cornifin (SPRR) family MmgE_PrpD PF03972.14 NODE_58721_length_285_cov_1.376000_g50782_i0forward_frame_2 - 0.14 10.6 0.0 0.16 10.4 0.0 1.1 1 0 0 1 1 1 0 MmgE/PrpD family Antimicrobial_6 PF08036.11 NODE_58721_length_285_cov_1.376000_g50782_i0forward_frame_2 - 8.4 6.6 5.8 25 5.0 0.8 3.1 3 0 0 3 3 3 0 Diapausin family of antimicrobial peptide GSH_synthase PF03199.15 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_3 - 0.056 13.9 0.4 0.062 13.7 0.4 1.1 1 0 0 1 1 1 0 Eukaryotic glutathione synthase DUF2791 PF10923.8 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.0081 15.0 1.5 0.0095 14.8 1.5 1.1 1 0 0 1 1 1 1 P-loop Domain of unknown function (DUF2791) KinB_sensor PF16767.5 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.011 16.2 2.0 0.013 16.0 2.0 1.1 1 0 0 1 1 1 0 Sensor domain of alginate biosynthesis sensor protein KinB NAD_binding_5 PF07994.12 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.047 13.1 3.5 0.048 13.0 3.5 1.1 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase HalX PF08663.10 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.049 13.9 0.4 1.1 9.6 0.0 2.1 1 1 0 2 2 2 0 HalX domain DASH_Dad3 PF08656.10 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.19 11.8 2.6 1.3 9.2 0.1 2.1 1 1 1 2 2 2 0 DASH complex subunit Dad3 Fib_alpha PF08702.10 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.7 10.1 7.8 0.75 10.0 7.8 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2721 PF11026.8 NODE_58717_length_285_cov_1.480000_g50778_i0reverse_frame_2 - 1 9.3 4.3 0.2 11.5 0.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) Retinal PF15449.6 NODE_58714_length_285_cov_1.540000_g50775_i0reverse_frame_2 - 0.1 10.4 3.5 0.12 10.2 3.5 1.0 1 0 0 1 1 1 0 Retinal protein Peptidase_C2 PF00648.21 NODE_58712_length_285_cov_1.592000_g50773_i0reverse_frame_2 - 0.00052 19.1 0.1 0.00056 19.0 0.1 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Phage_ASH PF10554.9 NODE_58710_length_285_cov_1.596000_g50771_i0forward_frame_3 - 0.14 12.5 0.1 0.19 12.1 0.1 1.1 1 0 0 1 1 1 0 Ash protein family DUF951 PF06107.11 NODE_58709_length_285_cov_1.648000_g50770_i0reverse_frame_3 - 0.099 12.6 0.1 0.31 11.0 0.0 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) Cytochrom_B_C PF00032.17 NODE_58709_length_285_cov_1.648000_g50770_i0reverse_frame_2 - 0.015 15.5 0.3 0.019 15.2 0.3 1.1 1 0 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD CopK PF11525.8 NODE_58702_length_285_cov_1.768000_g50763_i0reverse_frame_2 - 0.064 12.9 0.1 0.096 12.3 0.1 1.3 1 0 0 1 1 1 0 Copper resistance protein K NHS PF15273.6 NODE_58697_length_285_cov_1.872000_g50758_i0reverse_frame_2 - 0.0069 15.6 0.9 0.0072 15.5 0.9 1.0 1 0 0 1 1 1 1 NHS-like NLRC4_HD PF17889.1 NODE_58694_length_285_cov_1.888000_g50755_i0reverse_frame_3 - 0.066 13.6 0.1 0.12 12.7 0.1 1.5 1 1 0 1 1 1 0 NLRC4 helical domain zf-rbx1 PF12678.7 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 5.5e-05 23.4 0.8 8.1e-05 22.8 0.8 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.0022 18.3 1.2 0.0038 17.5 1.2 1.5 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.035 14.2 1.0 0.033 14.2 1.0 1.4 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.17 12.0 0.6 0.17 12.0 0.6 1.7 2 0 0 2 2 2 0 RING-variant domain Phage_Gp17 PF17549.2 NODE_58690_length_285_cov_1.968000_g50751_i0forward_frame_2 - 0.023 14.7 0.4 0.033 14.2 0.4 1.4 1 1 0 1 1 1 0 Gene Product 17 PRIMA1 PF16101.5 NODE_58686_length_285_cov_2.012000_g50747_i0forward_frame_2 - 0.47 10.5 7.0 0.75 9.8 7.0 1.4 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Vps26 PF03643.15 NODE_58683_length_285_cov_2.040000_g50744_i0reverse_frame_2 - 0.023 13.7 0.1 0.028 13.4 0.1 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 26 cNMP_binding PF00027.29 NODE_58682_length_285_cov_2.048000_g50743_i0forward_frame_2 - 0.0011 18.9 0.0 0.0014 18.7 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF2511 PF10709.9 NODE_58674_length_285_cov_2.208000_g50735_i0forward_frame_3 - 0.074 13.3 0.0 0.093 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2511) DNA_pol_B_exo1 PF03104.19 NODE_58669_length_285_cov_2.356000_g50730_i0reverse_frame_2 - 1.7e-10 40.6 0.3 1.8e-10 40.5 0.3 1.0 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain AA_permease PF00324.21 NODE_58668_length_285_cov_2.356000_g50729_i0forward_frame_2 - 2.6e-15 56.0 5.0 3e-15 55.8 5.0 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_58668_length_285_cov_2.356000_g50729_i0forward_frame_2 - 0.00014 20.8 6.8 0.00016 20.7 6.8 1.0 1 0 0 1 1 1 1 Amino acid permease LapA_dom PF06305.11 NODE_58668_length_285_cov_2.356000_g50729_i0forward_frame_2 - 5.6 6.9 8.6 0.99 9.3 2.8 2.4 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Trans_reg_C PF00486.28 NODE_58666_length_285_cov_2.444000_g50727_i0forward_frame_3 - 1.5e-05 24.9 0.0 6.8e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 NODE_58666_length_285_cov_2.444000_g50727_i0forward_frame_3 - 0.00017 21.7 0.0 0.0003 20.9 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain DUF444 PF04285.12 NODE_58664_length_285_cov_2.504000_g50725_i0reverse_frame_2 - 2.7e-29 102.5 1.2 2.9e-29 102.4 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF444) DUF2390 PF09523.10 NODE_58661_length_285_cov_2.640000_g50722_i0forward_frame_3 - 0.00038 20.7 0.0 0.00045 20.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2390) Leader_Thr PF08254.11 NODE_58660_length_285_cov_2.660000_g50721_i0reverse_frame_2 - 0.058 13.1 0.6 0.13 12.0 0.6 1.6 1 0 0 1 1 1 0 Threonine leader peptide DUF4517 PF15006.6 NODE_58660_length_285_cov_2.660000_g50721_i0forward_frame_3 - 0.047 13.8 0.1 0.049 13.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4517) AmoC PF04896.12 NODE_58660_length_285_cov_2.660000_g50721_i0forward_frame_3 - 0.057 12.7 0.3 0.064 12.5 0.3 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C SRP72 PF08492.12 NODE_58656_length_285_cov_2.820000_g50717_i0reverse_frame_3 - 0.024 15.1 0.4 0.064 13.7 0.1 1.9 2 0 0 2 2 2 0 SRP72 RNA-binding domain RasGAP PF00616.19 NODE_58653_length_285_cov_2.904000_g50714_i0reverse_frame_2 - 0.01 15.6 1.2 0.011 15.4 1.2 1.1 1 0 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase AIDA PF16168.5 NODE_58650_length_285_cov_2.992000_g50711_i0forward_frame_3 - 3.2e-19 68.7 2.1 1.2e-18 66.9 0.4 2.0 2 0 0 2 2 2 1 Adhesin of bacterial autotransporter system, probable stalk DUF3051 PF11252.8 NODE_58650_length_285_cov_2.992000_g50711_i0forward_frame_3 - 0.16 11.7 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3051) FxsA PF04186.13 NODE_58645_length_285_cov_3.084000_g50706_i0forward_frame_2 - 2.5e-15 56.5 2.2 3.1e-15 56.2 2.2 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein DDE_Tnp_1 PF01609.21 NODE_58643_length_285_cov_3.148000_g50704_i0reverse_frame_2 - 2e-08 34.1 0.0 2.5e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_assoc PF13808.6 NODE_58643_length_285_cov_3.148000_g50704_i0reverse_frame_2 - 0.00087 19.3 0.1 0.0013 18.7 0.1 1.3 1 0 0 1 1 1 1 DDE_Tnp_1-associated DUF374 PF04028.13 NODE_58643_length_285_cov_3.148000_g50704_i0reverse_frame_2 - 0.0045 16.5 0.3 0.01 15.4 0.3 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF374) P22_Tail-4 PF11650.8 NODE_58643_length_285_cov_3.148000_g50704_i0reverse_frame_2 - 0.17 11.8 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 P22 tail accessory factor PAG PF15347.6 NODE_58640_length_285_cov_4.556000_g50701_i0forward_frame_3 - 3.1 6.7 3.3 3.7 6.4 3.3 1.0 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched DUF1187 PF06688.11 NODE_58639_length_285_cov_5.316000_g50700_i0reverse_frame_2 - 0.095 13.1 0.2 0.18 12.2 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1187) CotH PF08757.11 NODE_58634_length_285_cov_36.356000_g50695_i0reverse_frame_2 - 0.071 12.6 0.5 0.097 12.2 0.5 1.1 1 0 0 1 1 1 0 CotH kinase protein Ribosomal_L6e_N PF03868.15 NODE_58625_length_285_cov_56.768000_g50686_i0forward_frame_2 - 0.58 10.4 8.4 2.3 8.5 8.4 1.9 1 1 0 1 1 1 0 Ribosomal protein L6, N-terminal domain PIH1_CS PF18201.1 NODE_58617_length_285_cov_78.056000_g50678_i0reverse_frame_3 - 2.9e-07 30.8 0.0 1.1e-06 29.0 0.0 1.7 2 0 0 2 2 2 1 PIH1 CS-like domain DUF417 PF04224.12 NODE_58617_length_285_cov_78.056000_g50678_i0forward_frame_3 - 0.12 11.9 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF417 DEC-1_N PF04625.13 NODE_58612_length_285_cov_92.456000_g50673_i0forward_frame_3 - 0.13 11.3 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Tektin PF03148.14 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 2e-05 23.5 8.8 2.4e-05 23.3 8.8 1.0 1 0 0 1 1 1 1 Tektin family Angiomotin_C PF12240.8 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.0039 16.8 3.7 0.0039 16.8 3.7 1.8 1 1 1 2 2 2 1 Angiomotin C terminal Phage_Mu_Gam PF07352.12 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.027 14.4 8.6 0.039 13.9 4.8 2.0 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein Flagellar_rod PF05149.12 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.14 11.6 9.1 0.16 11.4 9.1 1.0 1 0 0 1 1 1 0 Paraflagellar rod protein UPF0242 PF06785.11 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.45 10.6 10.1 0.55 10.3 10.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CENP-H PF05837.12 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.87 10.0 8.9 0.55 10.7 5.6 1.9 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Atg14 PF10186.9 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 3.6 6.6 11.2 4.5 6.3 11.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2628 PF10947.8 NODE_58604_length_285_cov_141.192000_g50665_i0forward_frame_3 - 3.8 7.9 9.9 5.2 7.5 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) EF-hand_8 PF13833.6 NODE_58603_length_285_cov_157.252000_g50664_i0reverse_frame_3 - 0.0084 15.9 0.9 0.013 15.3 0.9 1.3 1 0 0 1 1 1 1 EF-hand domain pair Herpes_UL92 PF03048.14 NODE_58603_length_285_cov_157.252000_g50664_i0reverse_frame_3 - 0.14 11.9 1.8 0.19 11.5 1.3 1.4 1 1 0 1 1 1 0 UL92 family DUF4263 PF14082.6 NODE_58595_length_285_cov_324.984000_g50656_i0reverse_frame_3 - 0.044 14.0 0.0 0.054 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4263) Dynein_AAA_lid PF17852.1 NODE_58594_length_285_cov_328.332000_g50655_i0reverse_frame_2 - 1 9.5 3.0 1.2 9.2 3.0 1.2 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain MOZART2 PF12926.7 NODE_58594_length_285_cov_328.332000_g50655_i0reverse_frame_2 - 1.5 8.4 4.4 1.4 8.6 0.7 2.0 1 1 1 2 2 2 0 Mitotic-spindle organizing gamma-tubulin ring associated DUF4097 PF13349.6 NODE_58594_length_285_cov_328.332000_g50655_i0forward_frame_2 - 0.15 11.4 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 Putative adhesin YrhK PF14145.6 NODE_58594_length_285_cov_328.332000_g50655_i0forward_frame_2 - 1.4 8.9 12.1 3.2e+02 1.3 12.1 3.6 1 1 0 1 1 1 0 YrhK-like protein YadA_head PF05658.14 NODE_58594_length_285_cov_328.332000_g50655_i0forward_frame_2 - 1.6 9.2 18.1 26 5.4 1.4 5.6 2 1 1 4 4 4 0 Head domain of trimeric autotransporter adhesin SepF PF04472.12 ORF99565 - 0.068 13.5 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Cell division protein SepF Hpr_kinase_C PF07475.12 ORF98724 - 0.053 13.0 1.5 0.06 12.9 1.5 1.0 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain NADHdh PF00146.21 ORF97447 - 1.5e-30 106.6 9.4 1.6e-30 106.4 9.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF406 PF04175.12 ORF96622 - 1.9e-38 130.8 1.3 2.2e-38 130.6 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF406) AAA_12 PF13087.6 ORF9585 - 2.9e-14 53.1 0.0 3.7e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain EssA PF10661.9 ORF95703 - 0.071 13.0 3.3 0.086 12.7 3.3 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA Pkinase PF00069.25 ORF94773 - 2.2e-12 46.9 0.0 2.6e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94773 - 2.4e-05 23.8 0.0 2.7e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF94773 - 0.0019 17.6 0.0 0.0023 17.3 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Mito_carr PF00153.27 ORF94767 - 4.6e-09 36.1 0.0 5.3e-06 26.3 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein YtxH PF12732.7 ORF94142 - 0.16 12.5 0.5 0.2 12.2 0.5 1.2 1 0 0 1 1 1 0 YtxH-like protein TB2_DP1_HVA22 PF03134.19 ORF94127 - 0.059 13.3 0.8 0.084 12.8 0.6 1.5 1 1 0 1 1 1 0 TB2/DP1, HVA22 family NRIP1_repr_1 PF15687.5 ORF93773 - 0.033 13.9 0.2 0.042 13.5 0.2 1.2 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 1 B2 PF11473.8 ORF93633 - 0.11 12.4 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 RNA binding protein B2 DGF-1_C PF11040.8 ORF92829 - 0.61 10.1 2.9 0.79 9.8 2.9 1.3 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus Chal_sti_synt_N PF00195.19 ORF92724 - 0.13 11.6 0.3 0.17 11.3 0.3 1.1 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain KIX PF02172.16 ORF92254 - 0.17 12.2 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 KIX domain Peptidase_C41 PF05417.11 ORF9134 - 0.00034 20.5 0.2 0.00038 20.3 0.2 1.2 1 0 0 1 1 1 1 Hepatitis E cysteine protease XFP_C PF09363.10 ORF90635 - 0.018 14.5 0.1 0.021 14.3 0.1 1.0 1 0 0 1 1 1 0 XFP C-terminal domain CRT-like PF08627.10 ORF90227 - 0.013 14.5 0.2 0.016 14.2 0.2 1.1 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like PTS_IIB PF02302.17 ORF89714 - 1.4e-10 41.7 0.1 1.7e-10 41.5 0.1 1.0 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit TPP_enzyme_M PF00205.22 ORF89714 - 0.053 13.3 0.0 0.08 12.7 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain SEC-C PF02810.15 ORF88651 - 1.4e-10 40.8 10.0 2.1e-10 40.3 10.0 1.3 1 0 0 1 1 1 1 SEC-C motif HrpB7 PF09486.10 ORF88651 - 0.0056 17.1 4.1 0.0067 16.8 4.1 1.1 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) SLS PF14611.6 ORF88651 - 0.0091 15.8 1.0 0.011 15.6 1.0 1.1 1 0 0 1 1 1 1 Mitochondrial inner-membrane-bound regulator Virulence_fact PF13769.6 ORF88651 - 0.016 15.4 1.5 0.021 15.0 1.5 1.1 1 0 0 1 1 1 0 Virulence factor Folliculin PF11704.8 ORF88651 - 0.034 14.0 1.0 0.035 14.0 1.0 1.1 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport Pro_racemase PF05544.11 ORF88651 - 0.063 12.3 0.3 0.073 12.1 0.3 1.0 1 0 0 1 1 1 0 Proline racemase DUF3715 PF12509.8 ORF87559 - 0.005 16.8 0.2 0.005 16.8 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3715) Terminase_2 PF03592.16 ORF87473 - 0.0063 17.0 0.5 0.015 15.8 0.5 1.7 1 1 0 1 1 1 1 Terminase small subunit DUF759 PF05537.11 ORF87473 - 0.018 13.9 0.1 0.019 13.9 0.1 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF759) Hpr_kinase_C PF07475.12 ORF87458 - 0.053 13.0 1.5 0.06 12.9 1.5 1.0 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain DUF4787 PF16029.5 ORF86645 - 0.0083 16.2 0.3 0.011 15.9 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4787) KRTAP PF11759.8 ORF86421 - 4.6 7.8 7.1 90 3.7 7.1 2.1 1 1 0 1 1 1 0 Keratin-associated matrix DUF640 PF04852.12 ORF86421 - 5.8 7.1 6.4 11 6.1 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF640) EamA PF00892.20 ORF84728 - 0.00037 20.7 6.0 0.08 13.1 1.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family TMEM238 PF15125.6 ORF84728 - 1.3 9.2 7.5 0.76 10.0 1.9 2.2 2 0 0 2 2 2 0 TMEM238 protein family DUF4131 PF13567.6 ORF84728 - 2.7 7.6 4.1 5 6.7 4.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) DUF4791 PF16039.5 ORF82891 - 0.023 14.2 0.1 0.023 14.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4791) DUF2420 PF10336.9 ORF82891 - 0.062 13.3 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) Urm1 PF09138.11 ORF82772 - 5.2e-31 106.9 0.3 5.7e-31 106.7 0.3 1.0 1 0 0 1 1 1 1 Urm1 (Ubiquitin related modifier) ThiS PF02597.20 ORF82772 - 1.8e-09 38.1 0.0 2e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 ORF82772 - 0.13 12.4 1.8 1.6 8.8 0.1 2.6 3 0 0 3 3 3 0 ThiS-like ubiquitin Cu_amine_oxidN1 PF07833.11 ORF82294 - 0.078 13.5 0.0 0.098 13.2 0.0 1.2 1 0 0 1 1 1 0 Copper amine oxidase N-terminal domain KdgM PF06178.13 ORF82148 - 7e-08 32.4 6.8 7.5e-08 32.3 6.8 1.0 1 0 0 1 1 1 1 Oligogalacturonate-specific porin protein (KdgM) BBP2 PF07642.11 ORF82148 - 0.00013 21.3 1.8 0.00014 21.2 1.8 1.0 1 0 0 1 1 1 1 Putative beta-barrel porin-2, OmpL-like. bbp2 YfaZ PF07437.11 ORF82148 - 0.082 12.5 0.3 0.089 12.4 0.3 1.2 1 1 0 1 1 1 0 YfaZ precursor KIAA1430 PF13879.6 ORF81813 - 2.4e-06 28.3 0.1 2.4e-06 28.3 0.1 1.8 2 0 0 2 2 2 1 KIAA1430 homologue UPF0242 PF06785.11 ORF81813 - 0.015 15.4 2.2 0.016 15.3 2.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Cep57_CLD_2 PF14197.6 ORF81813 - 0.044 13.9 1.4 0.056 13.5 1.4 1.2 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 Casc1_N PF15927.5 ORF81144 - 3.1 7.5 41.3 53 3.4 41.3 2.0 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus MDFI PF15316.6 ORF81144 - 8 6.5 8.6 8.6 6.4 8.6 1.0 1 0 0 1 1 1 0 MyoD family inhibitor GRDP-like PF07173.12 ORF81126 - 0.0076 16.9 0.3 0.0076 16.9 0.3 1.9 1 1 1 2 2 2 1 Glycine-rich domain-containing protein-like DUF4187 PF13821.6 ORF81126 - 0.062 13.1 0.2 0.093 12.5 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) P19Arf_N PF07392.12 ORF80529 - 0.05 14.1 0.4 0.13 12.7 0.1 1.8 2 0 0 2 2 2 0 Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus Flt3_lig PF02947.14 ORF79988 - 0.014 15.6 0.9 0.016 15.4 0.9 1.3 1 1 0 1 1 1 0 flt3 ligand DUF4455 PF14643.6 ORF79988 - 0.025 13.3 1.6 0.052 12.2 1.7 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4455) Endotoxin_N PF03945.14 ORF79988 - 0.039 13.6 2.2 0.044 13.5 2.2 1.2 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain Sod_Fe_N PF00081.22 ORF76919 - 1.1e-25 89.9 0.4 1.3e-25 89.7 0.4 1.1 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Gemini_AL3 PF01407.17 ORF75512 - 0.048 13.5 1.3 0.068 13.0 1.3 1.5 1 1 0 1 1 1 0 Geminivirus AL3 protein Ras PF00071.22 ORF75491 - 6.8e-29 100.5 0.1 7.7e-29 100.4 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF75491 - 2.2e-23 82.7 0.1 2.5e-23 82.6 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Gtr1_RagA PF04670.12 ORF75491 - 3.4e-05 23.3 0.0 3.6e-05 23.2 0.0 1.0 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF75491 - 0.00035 20.6 0.1 0.0004 20.4 0.1 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Arf PF00025.21 ORF75491 - 0.00095 18.7 0.1 0.00096 18.6 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family AAA_7 PF12775.7 ORF75491 - 0.0017 17.9 0.0 0.0019 17.8 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF75491 - 0.0047 16.8 0.0 0.0047 16.8 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_24 PF13479.6 ORF75491 - 0.011 15.4 0.1 0.012 15.4 0.1 1.1 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF75491 - 0.017 15.4 0.0 0.017 15.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF75491 - 0.035 14.5 0.0 0.036 14.4 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 ORF75491 - 0.049 13.4 0.0 0.075 12.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain NTPase_1 PF03266.15 ORF75491 - 0.053 13.4 0.1 0.063 13.2 0.1 1.1 1 0 0 1 1 1 0 NTPase GTP_EFTU PF00009.27 ORF75491 - 0.055 13.0 0.1 1.3 8.6 0.0 2.0 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain AAA_5 PF07728.14 ORF75491 - 0.073 13.1 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TniB PF05621.11 ORF75491 - 0.084 12.3 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein AAA_33 PF13671.6 ORF75491 - 0.1 12.7 0.3 0.86 9.8 0.0 1.9 1 1 1 2 2 2 0 AAA domain FAM216B PF15107.6 ORF75491 - 0.12 12.3 0.1 1.8 8.5 0.0 2.0 1 1 1 2 2 2 0 FAM216B protein family MCM PF00493.23 ORF75491 - 0.13 11.3 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain ABC_tran PF00005.27 ORF75491 - 0.14 12.7 0.2 0.16 12.5 0.2 1.3 1 1 0 1 1 1 0 ABC transporter Pdase_C33_assoc PF14756.6 ORF75308 - 0.011 15.7 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase_C33-associated domain CEP170_C PF15308.6 ORF7438 - 0.17 10.5 0.1 0.18 10.3 0.1 1.1 1 0 0 1 1 1 0 CEP170 C-terminus LRR_4 PF12799.7 ORF74140 - 2.8e-09 37.1 12.3 1.1e-06 28.8 2.9 2.1 1 1 2 3 3 3 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF74140 - 6.3e-05 22.6 5.7 0.00023 20.9 5.2 2.1 1 1 1 2 2 2 1 Leucine rich repeat LRR_9 PF14580.6 ORF74140 - 0.00084 18.9 1.0 0.0013 18.3 1.0 1.3 1 0 0 1 1 1 1 Leucine-rich repeat LRR_6 PF13516.6 ORF74140 - 0.52 10.5 5.0 12 6.3 0.2 2.7 3 0 0 3 3 3 0 Leucine Rich repeat Peptidase_S49_N PF08496.10 ORF7388 - 0.092 12.8 0.7 0.093 12.8 0.7 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal PUMA PF15826.5 ORF73175 - 0.0014 18.8 0.1 0.0017 18.6 0.1 1.1 1 0 0 1 1 1 1 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis Striatin PF08232.12 ORF72448 - 1.1e-06 29.3 3.1 1.1e-06 29.3 3.1 1.4 2 0 0 2 2 2 1 Striatin family Jnk-SapK_ap_N PF09744.9 ORF72448 - 0.0082 16.4 1.8 0.0086 16.3 1.8 1.2 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Trypsin_2 PF13365.6 ORF71371 - 0.046 14.6 0.2 0.064 14.1 0.2 1.4 1 1 0 1 1 1 0 Trypsin-like peptidase domain Voldacs PF03517.13 ORF70359 - 0.06 13.5 0.0 0.075 13.1 0.0 1.1 1 0 0 1 1 1 0 Regulator of volume decrease after cellular swelling FlaF PF07309.11 ORF70268 - 0.077 13.0 0.1 0.091 12.8 0.1 1.1 1 0 0 1 1 1 0 Flagellar protein FlaF N2227 PF07942.12 ORF70268 - 0.084 12.0 0.0 0.092 11.9 0.0 1.0 1 0 0 1 1 1 0 N2227-like protein DUF5318 PF17249.2 ORF69691 - 0.053 13.3 0.2 0.082 12.7 0.0 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5318) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks254.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks254.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks254.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks254.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_2 PF13347.6 ORF69683 - 1.3e-05 24.0 0.9 1.5e-05 23.7 0.9 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein S4_2 PF13275.6 ORF68693 - 0.051 13.4 0.0 0.064 13.1 0.0 1.2 1 0 0 1 1 1 0 S4 domain TPR_10 PF13374.6 ORF67929 - 2.2e-09 36.9 0.1 1.2e-05 25.0 0.0 2.3 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF67929 - 4.7e-09 36.4 0.2 6.6e-09 35.9 0.2 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF67929 - 0.0036 17.2 0.3 0.18 11.9 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF67929 - 0.0074 16.3 0.2 0.071 13.3 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF67929 - 0.013 15.7 0.2 0.34 11.2 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF67929 - 0.026 14.4 0.1 0.55 10.1 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF67929 - 0.061 14.2 1.5 0.3 12.0 0.0 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat Pkinase PF00069.25 ORF67827 - 1.3e-29 103.4 0.1 1.3e-29 103.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67827 - 4.8e-15 55.5 0.0 4.8e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF67827 - 1.3e-05 24.7 0.0 1.5e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF67827 - 3.1e-05 23.5 0.0 3.1e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 Kinase-like RIO1 PF01163.22 ORF67827 - 0.0007 19.2 0.1 0.00074 19.2 0.1 1.1 1 0 0 1 1 1 1 RIO1 family dCache_2 PF08269.11 ORF67827 - 0.015 14.5 0.1 0.015 14.5 0.1 1.1 1 0 0 1 1 1 0 Cache domain Glycos_trans_3N PF02885.17 ORF67827 - 0.026 14.4 0.0 0.029 14.2 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain Pkinase_fungal PF17667.1 ORF67827 - 0.033 13.0 0.0 0.033 13.0 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Pox_ser-thr_kin PF05445.11 ORF67827 - 0.046 12.7 0.0 0.047 12.7 0.0 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase dCache_1 PF02743.18 ORF67827 - 0.054 13.3 0.0 0.055 13.3 0.0 1.0 1 0 0 1 1 1 0 Cache domain APH PF01636.23 ORF67827 - 0.12 12.3 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family SseC PF04888.12 ORF67820 - 1.5 8.4 11.3 1.7 8.2 11.3 1.1 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family DUF3783 PF12646.7 ORF67614 - 0.054 13.5 0.1 0.074 13.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3783) DUF4245 PF14030.6 ORF67524 - 0.19 11.7 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4245) Mucin PF01456.17 ORF67524 - 4.8 7.2 6.3 6.5 6.7 6.3 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein Amidohydro_3 PF07969.11 ORF66708 - 9.5e-07 28.6 0.0 1.1e-06 28.5 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family EGF_CA PF07645.15 ORF66490 - 0.054 13.7 0.6 0.085 13.1 0.6 1.4 1 0 0 1 1 1 0 Calcium-binding EGF domain RSN1_TM PF13967.6 ORF6574 - 0.007 16.1 0.1 0.0088 15.8 0.1 1.3 1 1 0 1 1 1 1 Late exocytosis, associated with Golgi transport DNA_pol_lambd_f PF10391.9 ORF6551 - 0.21 11.4 0.0 0.35 10.7 0.0 1.3 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda Ribosomal_L25p PF01386.19 ORF65341 - 4.1e-25 88.1 0.2 4.5e-25 88.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal L25p family C1_2 PF03107.16 ORF65127 - 1.4 9.3 9.1 2.2 8.7 9.1 1.5 1 1 0 1 1 1 0 C1 domain ECSCR PF15820.5 ORF6472 - 0.2 11.5 0.1 0.29 11.0 0.1 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator SAC3_GANP PF03399.16 ORF64004 - 0.045 13.1 0.1 0.045 13.1 0.1 1.1 1 0 0 1 1 1 0 SAC3/GANP family zf-primase PF09329.11 ORF63944 - 0.03 14.1 0.1 0.047 13.5 0.1 1.4 1 0 0 1 1 1 0 Primase zinc finger Ala_racemase_N PF01168.20 ORF63183 - 0.014 15.0 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Alanine racemase, N-terminal domain Cnl2_NKP2 PF09447.10 ORF63122 - 1.5 9.0 6.2 0.78 9.9 2.9 2.0 2 0 0 2 2 2 0 Cnl2/NKP2 family protein Fzo_mitofusin PF04799.13 ORF62047 - 0.018 14.6 0.8 0.02 14.5 0.8 1.1 1 0 0 1 1 1 0 fzo-like conserved region Trehalose_PPase PF02358.16 ORF62047 - 0.03 13.4 0.1 0.042 13.0 0.1 1.2 1 0 0 1 1 1 0 Trehalose-phosphatase RhoGEF PF00621.20 ORF60696 - 0.36 11.1 0.7 0.51 10.5 0.7 1.1 1 0 0 1 1 1 0 RhoGEF domain DUF3302 PF11742.8 ORF60557 - 0.0053 16.9 0.1 0.0085 16.2 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3302) FixQ PF05545.11 ORF60557 - 0.0068 16.4 0.0 0.01 15.8 0.0 1.3 1 0 0 1 1 1 1 Cbb3-type cytochrome oxidase component FixQ DUF5385 PF17359.2 ORF60557 - 0.0076 15.8 0.2 0.0093 15.6 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5385) ECSCR PF15820.5 ORF60557 - 0.0088 15.9 0.1 0.012 15.4 0.1 1.2 1 0 0 1 1 1 1 Endothelial cell-specific chemotaxis regulator DUF4448 PF14610.6 ORF60557 - 0.014 15.2 0.0 0.016 15.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) TMEM154 PF15102.6 ORF60557 - 0.027 14.4 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 TMEM154 protein family DUF3149 PF11346.8 ORF60557 - 0.041 13.5 0.1 0.067 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) TRAP_alpha PF03896.16 ORF60557 - 0.042 13.1 0.0 0.044 13.0 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Baculo_F PF12259.8 ORF60557 - 0.049 12.1 0.1 0.054 12.0 0.1 1.0 1 0 0 1 1 1 0 Baculovirus F protein Glycophorin_A PF01102.18 ORF60557 - 0.055 13.7 0.2 0.066 13.5 0.2 1.1 1 0 0 1 1 1 0 Glycophorin A Sigma_reg_N PF13800.6 ORF60557 - 0.062 13.6 0.1 0.084 13.2 0.1 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal SIT PF15330.6 ORF60557 - 0.09 13.2 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT CD34_antigen PF06365.12 ORF60557 - 0.13 11.9 0.3 0.17 11.5 0.3 1.2 1 1 0 1 1 1 0 CD34/Podocalyxin family TMEM52 PF14979.6 ORF60557 - 0.13 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Transmembrane 52 PLDc_N PF13396.6 ORF5980 - 0.11 12.4 0.1 0.17 11.9 0.1 1.3 1 0 0 1 1 1 0 Phospholipase_D-nuclease N-terminal DUF3276 PF11680.8 ORF59399 - 0.029 14.5 0.4 0.034 14.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3276) GlgX_C PF18390.1 ORF59329 - 0.043 13.6 0.1 0.059 13.2 0.1 1.3 1 0 0 1 1 1 0 Glycogen debranching enzyme C-terminal domain DUF3810 PF12725.7 ORF58930 - 0.17 11.2 2.1 0.25 10.6 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Imm32 PF15566.6 ORF58177 - 0.19 11.6 0.5 5.4 6.9 0.0 2.3 2 0 0 2 2 2 0 Immunity protein 32 DUF5381 PF17353.2 ORF5787 - 6.6 6.4 6.5 8.3 6.1 6.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5381) zf-RING_13 PF17977.1 ORF57206 - 0.039 14.1 1.3 0.052 13.7 1.3 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain HECW_N PF16562.5 ORF56924 - 0.085 12.7 0.2 0.099 12.5 0.2 1.1 1 0 0 1 1 1 0 N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2 DUF4077 PF13295.6 ORF56838 - 0.023 14.6 2.4 0.027 14.4 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) PspB PF06667.12 ORF56838 - 0.055 13.5 3.4 0.09 12.8 3.4 1.3 1 0 0 1 1 1 0 Phage shock protein B DUF3139 PF11337.8 ORF56838 - 0.13 12.9 3.9 0.17 12.6 3.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) DUF4352 PF11611.8 ORF56713 - 0.026 14.8 0.6 0.026 14.8 0.6 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4352) DASH_Dad3 PF08656.10 ORF56589 - 0.17 12.0 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 DASH complex subunit Dad3 RSN1_TM PF13967.6 ORF55890 - 0.007 16.1 0.1 0.0088 15.8 0.1 1.3 1 1 0 1 1 1 1 Late exocytosis, associated with Golgi transport EF-hand_8 PF13833.6 ORF55503 - 4.4e-11 42.4 0.1 6.7e-11 41.9 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF55503 - 7.5e-06 26.3 0.1 9.4e-06 26.0 0.1 1.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF55503 - 0.0018 17.7 1.0 0.0099 15.4 1.0 2.0 2 0 0 2 2 2 1 EF hand Fzo_mitofusin PF04799.13 ORF55450 - 0.018 14.6 0.8 0.02 14.5 0.8 1.1 1 0 0 1 1 1 0 fzo-like conserved region Trehalose_PPase PF02358.16 ORF55450 - 0.03 13.4 0.1 0.042 13.0 0.1 1.2 1 0 0 1 1 1 0 Trehalose-phosphatase DUF2014 PF09427.10 ORF55214 - 0.024 14.0 0.0 0.026 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2014) PCI PF01399.27 ORF55055 - 2e-10 41.1 0.3 3.5e-10 40.3 0.3 1.4 1 0 0 1 1 1 1 PCI domain TMF_TATA_bd PF12325.8 ORF55055 - 0.027 14.7 0.4 0.038 14.2 0.4 1.3 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DUF4268 PF14088.6 ORF55055 - 0.033 14.1 2.8 0.041 13.8 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4268) VID27_PH PF17747.1 ORF55055 - 0.046 14.0 0.5 0.051 13.9 0.5 1.1 1 0 0 1 1 1 0 VID27 PH-like domain bZIP_Maf PF03131.17 ORF54464 - 0.22 12.0 4.7 0.27 11.8 4.7 1.1 1 0 0 1 1 1 0 bZIP Maf transcription factor RCC1 PF00415.18 ORF53219 - 3.1e-07 30.9 0.0 0.027 15.1 0.0 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF53219 - 6.4e-05 22.6 0.3 0.00029 20.5 0.1 1.9 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat KH_9 PF17904.1 ORF5242 - 0.049 14.0 0.2 0.067 13.6 0.2 1.2 1 0 0 1 1 1 0 FMRP KH0 domain TRPM_tetra PF16519.5 ORF52386 - 0.052 13.7 1.5 0.072 13.2 1.5 1.2 1 0 0 1 1 1 0 Tetramerisation domain of TRPM DUF3368 PF11848.8 ORF52168 - 0.19 11.5 0.8 13 5.7 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3368) DUF2838 PF10998.8 ORF52006 - 9e-10 38.8 12.2 1e-09 38.6 12.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) YtxH PF12732.7 ORF51895 - 0.16 12.5 0.5 0.2 12.2 0.5 1.2 1 0 0 1 1 1 0 YtxH-like protein DNA_ligase_A_C PF04679.15 ORF51316 - 1.4e-12 48.1 0.0 1.6e-12 47.9 0.0 1.0 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region BLOC1_2 PF10046.9 ORF50326 - 0.00049 20.3 3.0 0.12 12.7 0.2 2.0 1 1 1 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 ORF50326 - 0.00089 19.3 1.9 0.0029 17.6 1.7 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) ADIP PF11559.8 ORF50326 - 0.0048 17.0 6.1 0.0057 16.8 6.1 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF4200 PF13863.6 ORF50326 - 0.0051 17.2 7.4 0.0067 16.8 7.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) XhlA PF10779.9 ORF50326 - 0.0052 17.0 3.0 0.0084 16.3 3.0 1.3 1 0 0 1 1 1 1 Haemolysin XhlA DUF3584 PF12128.8 ORF50326 - 0.01 13.4 4.8 0.011 13.3 4.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) KELK PF15796.5 ORF50326 - 0.015 15.7 8.4 0.018 15.5 8.4 1.1 1 0 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase SYCE1 PF15233.6 ORF50326 - 0.015 15.3 5.9 0.018 15.1 5.9 1.1 1 0 0 1 1 1 0 Synaptonemal complex central element protein 1 Ax_dynein_light PF10211.9 ORF50326 - 0.017 15.1 5.2 0.02 14.8 5.2 1.3 1 0 0 1 1 1 0 Axonemal dynein light chain TPR_MLP1_2 PF07926.12 ORF50326 - 0.021 14.9 7.0 0.06 13.4 5.5 1.9 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein FlaC_arch PF05377.11 ORF50326 - 0.08 13.3 4.2 0.14 12.5 0.8 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) APG6_N PF17675.1 ORF50326 - 0.09 13.3 7.8 0.11 13.1 7.8 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region GIT_CC PF16559.5 ORF50326 - 0.14 12.1 6.9 1.9 8.4 2.5 2.1 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor DASH_Dam1 PF08653.10 ORF50326 - 0.15 11.9 1.7 5.1 7.0 0.3 2.2 2 0 0 2 2 2 0 DASH complex subunit Dam1 FapA PF03961.13 ORF50326 - 0.19 10.3 3.9 0.19 10.3 3.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A UPF0449 PF15136.6 ORF50326 - 0.2 12.1 5.7 3.1 8.3 0.7 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 DMPK_coil PF08826.10 ORF50326 - 0.29 11.3 13.6 0.32 11.1 3.2 2.6 1 1 1 2 2 2 0 DMPK coiled coil domain like DivIC PF04977.15 ORF50326 - 0.31 10.8 7.5 0.74 9.6 1.8 2.1 1 1 1 2 2 2 0 Septum formation initiator CENP-H PF05837.12 ORF50326 - 0.34 11.3 9.1 1.7 9.1 3.5 1.9 1 1 1 2 2 2 0 Centromere protein H (CENP-H) BST2 PF16716.5 ORF50326 - 0.34 11.5 7.3 0.68 10.6 7.3 1.6 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 TMF_DNA_bd PF12329.8 ORF50326 - 0.36 10.8 11.1 0.8 9.7 11.0 1.7 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding UPF0242 PF06785.11 ORF50326 - 0.43 10.6 6.2 0.47 10.5 6.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus YabA PF06156.13 ORF50326 - 0.73 10.5 6.2 1.7 9.3 6.2 1.6 1 1 0 1 1 1 0 Initiation control protein YabA Shugoshin_N PF07558.11 ORF50326 - 1.1 9.1 8.8 1.8 8.5 0.6 2.5 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region 7TM_GPCR_Sru PF10322.9 ORF49447 - 2.4 7.4 6.5 2.6 7.3 6.5 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru PBP1_TM PF14812.6 ORF49447 - 5.3 7.5 7.4 3.2 8.2 5.7 1.5 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Glyco_hydro_3_C PF01915.22 ORF49127 - 2.1e-16 60.5 0.0 2.4e-16 60.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain DUF4169 PF13770.6 ORF48030 - 4.2 7.7 7.4 12 6.2 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4169) Pdase_C33_assoc PF14756.6 ORF47732 - 0.011 15.7 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase_C33-associated domain zf-primase PF09329.11 ORF47554 - 0.03 14.1 0.1 0.047 13.5 0.1 1.4 1 0 0 1 1 1 0 Primase zinc finger YpmT PF17431.2 ORF47015 - 0.025 14.6 8.6 0.44 10.6 0.2 3.1 1 1 2 3 3 3 0 Uncharacterized YmpT-like DUF4441 PF14536.6 ORF45940 - 0.023 14.9 0.7 0.034 14.3 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) Ribosomal_S5_C PF03719.15 ORF45602 - 0.048 13.1 0.5 0.15 11.5 0.2 1.9 1 1 1 2 2 2 0 Ribosomal protein S5, C-terminal domain DUF3678 PF12435.8 ORF45408 - 0.15 11.4 0.1 0.15 11.4 0.1 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3678) DUF5465 PF17553.2 ORF45408 - 0.64 10.7 5.3 3.6 8.4 1.0 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5465) Alpha-E PF04168.12 ORF42953 - 0.073 12.9 0.1 0.093 12.5 0.1 1.0 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. Anti-adapt_IraP PF10796.9 ORF41669 - 0.015 15.8 1.1 0.043 14.4 0.2 1.8 1 1 1 2 2 2 0 Sigma-S stabilisation anti-adaptor protein Kelch_6 PF13964.6 ORF41378 - 0.0018 18.5 0.1 0.0039 17.4 0.1 1.7 1 1 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 ORF41378 - 0.025 14.6 0.0 0.048 13.7 0.0 1.5 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF41378 - 0.038 14.0 0.1 0.083 12.9 0.1 1.6 1 0 0 1 1 1 0 Kelch motif Kelch_1 PF01344.25 ORF41378 - 0.076 12.6 0.2 0.15 11.7 0.2 1.5 1 0 0 1 1 1 0 Kelch motif DNA_pol_B_palm PF14792.6 ORF41195 - 0.12 12.6 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 DNA polymerase beta palm DUF485 PF04341.12 ORF4085 - 0.16 12.0 2.7 0.2 11.6 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF2254 PF10011.9 ORF4085 - 0.3 9.9 1.5 0.35 9.7 1.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) SEF14_adhesin PF06443.11 ORF39973 - 0.054 13.4 0.0 0.064 13.1 0.0 1.1 1 0 0 1 1 1 0 SEF14-like adhesin Vps8 PF12816.7 ORF39814 - 0.071 12.6 0.3 0.11 12.0 0.2 1.5 1 1 0 1 1 1 0 Golgi CORVET complex core vacuolar protein 8 MFS_1 PF07690.16 ORF39044 - 0.0065 15.4 0.0 0.11 11.4 0.0 1.9 2 0 0 2 2 2 2 Major Facilitator Superfamily Glyco_hydro_99 PF16317.5 ORF39044 - 0.12 11.5 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 99 5-FTHF_cyc-lig PF01812.20 ORF38928 - 3.1e-24 85.8 0.0 3.4e-24 85.7 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family DUF5315 PF17242.2 ORF38862 - 0.21 11.4 2.3 1.2 9.1 0.3 2.1 1 1 1 2 2 2 0 Disordered region of unknown function (DUF5315) MSL2-CXC PF16682.5 ORF38724 - 0.33 11.1 15.4 1.4 9.1 4.1 2.2 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Exo_endo_phos PF03372.23 ORF38073 - 2.3e-05 24.0 0.0 2.6e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family FLYWCH PF04500.16 ORF3772 - 0.045 13.9 0.4 0.062 13.4 0.4 1.2 1 0 0 1 1 1 0 FLYWCH zinc finger domain Ppnp PF06865.11 ORF36486 - 1.4e-33 115.2 0.0 1.5e-33 115.1 0.0 1.0 1 0 0 1 1 1 1 Pyrimidine/purine nucleoside phosphorylase TRAPP PF04051.16 ORF36272 - 0.14 11.9 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Transport protein particle (TRAPP) component SseC PF04888.12 ORF34870 - 1.5 8.4 11.3 1.7 8.2 11.3 1.1 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family BTB PF00651.31 ORF3437 - 1.1e-09 38.4 0.3 9.8e-08 32.2 0.1 2.0 1 1 1 2 2 2 2 BTB/POZ domain Cep57_CLD_2 PF14197.6 ORF33217 - 8.2e-05 22.6 5.0 0.012 15.7 0.7 2.1 1 1 1 2 2 2 2 Centrosome localisation domain of PPC89 Taxilin PF09728.9 ORF33217 - 0.0016 17.7 11.6 0.0018 17.5 11.6 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein ADIP PF11559.8 ORF33217 - 0.0034 17.5 11.9 0.0043 17.1 11.9 1.2 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding TolA_bind_tri PF16331.5 ORF33217 - 0.0035 17.4 11.7 0.0054 16.8 11.7 1.5 1 1 0 1 1 1 1 TolA binding protein trimerisation Seryl_tRNA_N PF02403.22 ORF33217 - 0.0058 16.9 7.6 0.0077 16.4 7.6 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Jnk-SapK_ap_N PF09744.9 ORF33217 - 0.0063 16.7 9.3 0.0074 16.5 9.3 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Fib_alpha PF08702.10 ORF33217 - 0.0071 16.5 5.9 0.0071 16.5 5.9 1.8 1 1 1 2 2 2 1 Fibrinogen alpha/beta chain family Spc29 PF17082.5 ORF33217 - 0.011 15.6 5.0 0.014 15.3 5.0 1.2 1 0 0 1 1 1 0 Spindle Pole Component 29 Spc7 PF08317.11 ORF33217 - 0.012 14.5 11.4 0.014 14.3 11.4 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein YabA PF06156.13 ORF33217 - 0.013 16.2 4.6 0.013 16.2 4.6 1.6 1 1 0 1 1 1 0 Initiation control protein YabA ArsC PF03960.15 ORF33217 - 0.013 15.5 1.7 0.025 14.6 0.4 1.9 2 0 0 2 2 2 0 ArsC family DUF3540 PF12059.8 ORF33217 - 0.022 14.6 0.5 0.027 14.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3540) SlyX PF04102.12 ORF33217 - 0.026 15.1 7.5 0.026 15.1 7.5 1.5 2 0 0 2 2 1 0 SlyX CENP-H PF05837.12 ORF33217 - 0.046 14.1 7.4 0.026 14.9 5.6 1.5 1 1 1 2 2 2 0 Centromere protein H (CENP-H) UPF0242 PF06785.11 ORF33217 - 0.065 13.3 13.2 0.088 12.9 13.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2120 PF09893.9 ORF33217 - 0.09 12.9 3.9 0.12 12.4 1.2 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) DivIC PF04977.15 ORF33217 - 0.091 12.5 7.0 0.038 13.8 4.2 1.8 1 1 1 2 2 2 0 Septum formation initiator HIP1_clath_bdg PF16515.5 ORF33217 - 0.093 13.4 7.9 0.078 13.6 6.2 1.6 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 APG6_N PF17675.1 ORF33217 - 0.13 12.8 12.4 0.14 12.7 12.4 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region SKA2 PF16740.5 ORF33217 - 0.16 11.8 7.5 0.24 11.2 5.9 2.0 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 Rb_C PF08934.10 ORF33217 - 0.18 11.6 2.2 0.2 11.4 2.2 1.0 1 0 0 1 1 1 0 Rb C-terminal domain PKcGMP_CC PF16808.5 ORF33217 - 0.2 11.5 6.3 0.86 9.5 0.9 3.3 1 1 3 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase bZIP_1 PF00170.21 ORF33217 - 0.23 11.6 3.9 0.15 12.2 1.0 2.1 2 1 0 2 2 2 0 bZIP transcription factor BST2 PF16716.5 ORF33217 - 0.26 11.9 9.7 0.39 11.3 9.7 1.3 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Elf4 PF07011.11 ORF33217 - 0.32 11.0 5.5 0.39 10.7 4.6 1.6 1 1 1 2 2 2 0 Early Flowering 4 domain DUF4407 PF14362.6 ORF33217 - 0.35 10.2 5.9 0.43 9.9 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DASH_Dad1 PF08649.10 ORF33217 - 0.49 10.6 3.6 0.28 11.4 1.0 2.0 2 1 1 3 3 2 0 DASH complex subunit Dad1 TMPIT PF07851.13 ORF33217 - 0.61 9.3 8.3 0.7 9.1 8.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein Tho2 PF11262.8 ORF33217 - 0.64 9.2 8.2 0.73 9.0 8.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 UPF0231 PF06062.11 ORF33217 - 0.68 10.2 6.0 2 8.7 0.3 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0231) Csm1_N PF18504.1 ORF33217 - 0.8 10.1 10.3 0.92 9.9 0.8 2.7 1 1 2 3 3 3 0 Csm1 N-terminal domain DUF4446 PF14584.6 ORF33217 - 1 9.3 5.6 2.2 8.3 5.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) DUF948 PF06103.11 ORF33217 - 1.1 9.6 3.9 1.6 9.1 2.6 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Fungal_TACC PF12709.7 ORF33217 - 1.2 9.7 10.1 2.1e+02 2.5 10.1 2.3 1 1 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins Atg14 PF10186.9 ORF33217 - 1.4 8.0 10.4 1.6 7.7 10.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 NYD-SP28_assoc PF14775.6 ORF33217 - 1.8 8.7 7.2 4.7 7.4 0.8 2.4 1 1 1 2 2 2 0 Sperm tail C-terminal domain V_ATPase_I PF01496.19 ORF33217 - 2.6 5.9 8.8 2.6 5.9 8.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ZapB PF06005.12 ORF33217 - 3 8.3 12.9 18 5.8 12.9 2.2 1 1 0 1 1 1 0 Cell division protein ZapB DUF5600 PF18150.1 ORF33020 - 0.055 14.1 0.0 0.075 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5600) Nup188_C PF18378.1 ORF33015 - 0.12 11.2 0.0 0.13 11.1 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain DUF3742 PF12553.8 ORF32460 - 0.13 12.4 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) Orf78 PF06024.12 ORF32290 - 0.025 14.9 0.0 0.032 14.5 0.0 1.2 1 0 0 1 1 1 0 Orf78 (ac78) DUF1065 PF06358.11 ORF32073 - 0.0052 16.7 0.0 0.0056 16.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1065) NTS PF15447.6 ORF31989 - 0.11 13.0 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 N-terminal segments of PfEMP1 PP2C PF00481.21 ORF31498 - 0.0085 15.8 0.0 0.009 15.7 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C NADH_dehy_S2_C PF06444.11 ORF31068 - 0.13 12.7 0.6 0.13 12.7 0.6 1.9 1 1 1 2 2 2 0 NADH dehydrogenase subunit 2 C-terminus EssA PF10661.9 ORF29763 - 0.071 13.0 3.3 0.086 12.7 3.3 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA DUF1989 PF09347.10 ORF29170 - 0.15 11.7 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) KRTDAP PF15200.6 ORF28985 - 0.11 12.3 1.7 0.18 11.6 1.7 1.3 1 0 0 1 1 1 0 Keratinocyte differentiation-associated DUF4834 PF16118.5 ORF28216 - 0.027 15.4 0.8 0.038 15.0 0.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) SUR7 PF06687.12 ORF28216 - 0.07 12.7 5.6 0.077 12.6 5.6 1.2 1 0 0 1 1 1 0 SUR7/PalI family DUF3667 PF12412.8 ORF27234 - 0.036 13.6 0.0 0.065 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) DUF1645 PF07816.11 ORF26007 - 0.35 11.4 8.8 0.4 11.2 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1645) Miga PF10265.9 ORF25937 - 1.9 7.4 6.0 1.9 7.4 6.0 1.0 1 0 0 1 1 1 0 Mitoguardin TrkA_N PF02254.18 ORF25474 - 0.062 13.6 0.0 0.11 12.7 0.0 1.4 1 1 0 1 1 1 0 TrkA-N domain E2_bind PF08825.10 ORF24989 - 0.079 13.1 0.2 0.39 10.9 0.0 1.9 2 0 0 2 2 2 0 E2 binding domain PPP5 PF08321.12 ORF24555 - 0.048 14.0 0.0 0.059 13.7 0.0 1.1 1 0 0 1 1 1 0 PPP5 TPR repeat region Serine_protease PF18405.1 ORF24555 - 0.12 11.5 0.0 0.15 11.2 0.0 1.0 1 0 0 1 1 1 0 Gammaproteobacterial serine protease Synthase_beta PF11421.8 ORF24085 - 5.7 7.7 8.4 2 9.2 3.4 2.2 1 1 1 2 2 2 0 ATP synthase F1 beta subunit BK_channel_a PF03493.18 ORF23904 - 0.038 14.2 0.0 0.055 13.7 0.0 1.3 1 0 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit DUF1713 PF08213.11 ORF23872 - 0.052 13.5 1.7 0.12 12.3 1.7 1.6 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1713) MscS_TM PF12794.7 ORF22654 - 0.086 11.7 6.6 0.11 11.4 6.6 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 FAM60A PF15396.6 ORF22654 - 0.15 12.0 4.4 0.17 11.8 4.4 1.1 1 0 0 1 1 1 0 Protein Family FAM60A Herpes_TAF50 PF03326.13 ORF22654 - 0.83 8.2 8.8 0.93 8.1 8.8 1.0 1 0 0 1 1 1 0 Herpesvirus transcription activation factor (transactivator) ATP-synt_E PF05680.12 ORF22654 - 1.5 9.2 5.5 1.8 8.9 5.5 1.1 1 0 0 1 1 1 0 ATP synthase E chain DUF4407 PF14362.6 ORF22654 - 1.7 7.9 6.7 1.8 7.8 6.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spt20 PF12090.8 ORF22654 - 2.7 7.5 18.6 3 7.4 18.6 1.1 1 0 0 1 1 1 0 Spt20 family Pex26 PF07163.12 ORF22654 - 6.1 6.1 7.0 6.4 6.0 7.0 1.0 1 0 0 1 1 1 0 Pex26 protein Activator_LAG-3 PF11498.8 ORF22654 - 7.9 5.3 24.3 8.4 5.2 24.3 1.1 1 0 0 1 1 1 0 Transcriptional activator LAG-3 Presenilin PF01080.17 ORF22654 - 8.2 5.1 8.4 8.8 5.0 8.4 1.0 1 0 0 1 1 1 0 Presenilin AIG1 PF04548.16 ORF22654 - 8.7 5.6 10.2 11 5.3 10.2 1.1 1 0 0 1 1 1 0 AIG1 family DUF4523 PF15023.6 ORF22411 - 0.014 15.2 0.1 0.016 15.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4523) PARP PF00644.20 ORF21798 - 1.3e-06 28.1 0.5 3.1e-05 23.7 0.1 2.0 2 0 0 2 2 2 2 Poly(ADP-ribose) polymerase catalytic domain RPW8 PF05659.11 ORF21735 - 0.054 13.2 0.1 0.079 12.6 0.1 1.2 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Mnd1 PF03962.15 ORF21688 - 0.026 14.8 0.3 0.045 14.0 0.3 1.4 1 0 0 1 1 1 0 Mnd1 HTH domain RNase_HII PF01351.18 ORF21688 - 0.11 12.4 0.4 0.12 12.2 0.4 1.1 1 0 0 1 1 1 0 Ribonuclease HII tRNA-synt_His PF13393.6 ORF20764 - 0.00096 18.5 0.0 0.0016 17.8 0.0 1.3 2 0 0 2 2 2 1 Histidyl-tRNA synthetase DUF515 PF04415.12 ORF20764 - 0.019 13.4 0.1 0.021 13.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) DUF434 PF04256.12 ORF20610 - 0.083 12.6 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF434) Golgin_A5 PF09787.9 ORF2001 - 0.0015 18.1 11.6 0.0016 18.0 11.6 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 BAR_2 PF10455.9 ORF2001 - 0.0085 15.3 3.7 0.011 14.9 3.7 1.1 1 0 0 1 1 1 1 Bin/amphiphysin/Rvs domain for vesicular trafficking zf-C4H2 PF10146.9 ORF2001 - 0.17 12.2 9.9 0.18 12.1 9.9 1.0 1 0 0 1 1 1 0 Zinc finger-containing protein BSD PF03909.17 ORF2001 - 0.28 11.2 2.3 0.36 10.9 0.7 2.0 2 1 0 2 2 2 0 BSD domain FlaC_arch PF05377.11 ORF2001 - 0.35 11.3 5.4 1.2 9.6 0.3 2.8 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) APG6_N PF17675.1 ORF2001 - 0.39 11.2 10.6 0.57 10.7 10.6 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region Zein-binding PF04576.15 ORF2001 - 0.41 10.9 14.6 2.4 8.5 4.0 2.9 1 1 2 3 3 3 0 Zein-binding Prefoldin PF02996.17 ORF2001 - 0.48 10.3 13.1 1.1 9.2 1.1 2.1 2 0 0 2 2 2 0 Prefoldin subunit Activator_LAG-3 PF11498.8 ORF2001 - 0.85 8.5 12.6 0.97 8.3 12.6 1.0 1 0 0 1 1 1 0 Transcriptional activator LAG-3 Sec20 PF03908.13 ORF2001 - 1 9.3 6.9 0.96 9.4 3.1 2.1 1 1 1 2 2 2 0 Sec20 LPP PF04728.13 ORF2001 - 1.2 9.6 9.5 9.1 6.8 0.3 2.4 1 1 0 2 2 2 0 Lipoprotein leucine-zipper DUF724 PF05266.14 ORF2001 - 1.5 8.6 10.5 1.6 8.5 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Atg14 PF10186.9 ORF2001 - 2 7.4 11.6 6 5.9 11.7 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4349 PF14257.6 ORF2001 - 4.2 6.7 9.7 9.8 5.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) DUF4607 PF15380.6 ORF19226 - 0.022 14.3 0.0 0.023 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4607) ThiW PF09512.10 ORF18405 - 0.067 13.3 0.1 0.09 12.9 0.1 1.2 1 0 0 1 1 1 0 Thiamine-precursor transporter protein (ThiW) Sod_Fe_N PF00081.22 ORF17859 - 1.1e-25 89.9 0.4 1.3e-25 89.7 0.4 1.1 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain TMEM215 PF15746.5 ORF17633 - 0.037 13.5 0.6 0.044 13.2 0.6 1.0 1 0 0 1 1 1 0 TMEM215 family HET PF06985.11 ORF15095 - 0.00069 20.0 0.0 0.00082 19.7 0.0 1.1 1 0 0 1 1 1 1 Heterokaryon incompatibility protein (HET) Abhydrolase_1 PF00561.20 ORF13981 - 1.6e-13 50.9 0.0 1.8e-13 50.8 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF13981 - 4.3e-09 36.0 0.0 4.7e-09 35.9 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF13981 - 3.9e-06 27.6 0.0 4.4e-06 27.5 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF915 PF06028.11 ORF13981 - 0.0019 17.6 0.6 0.0096 15.3 0.1 2.0 2 1 1 3 3 3 1 Alpha/beta hydrolase of unknown function (DUF915) PGAP1 PF07819.13 ORF13981 - 0.13 11.9 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 PGAP1-like protein Glyco_hydro_4C PF11975.8 ORF13946 - 0.0046 17.1 0.0 0.0058 16.7 0.0 1.1 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain DUF2013 PF09431.10 ORF12811 - 0.0015 18.7 1.0 0.0027 17.9 0.2 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF2013) Anoctamin PF04547.12 ORF12811 - 0.0026 16.7 0.3 0.0026 16.7 0.3 1.6 1 1 1 2 2 2 1 Calcium-activated chloride channel HTH_37 PF13744.6 ORF12739 - 2.5e-12 46.6 0.2 3.3e-12 46.2 0.2 1.2 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 ORF12739 - 8.3e-12 45.0 0.1 1.3e-11 44.4 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 ORF12739 - 5.6e-09 36.2 0.3 7.9e-09 35.7 0.3 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF12739 - 3.9e-06 26.5 0.2 7.9e-06 25.5 0.2 1.6 1 1 0 1 1 1 1 Homeodomain-like domain MarR_2 PF12802.7 ORF12739 - 5.1e-06 26.3 0.3 7.2e-06 25.8 0.3 1.2 1 0 0 1 1 1 1 MarR family Sigma70_r4 PF04545.16 ORF12739 - 6.9e-05 22.3 0.2 0.00014 21.3 0.1 1.6 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 ORF12739 - 0.00029 20.3 0.0 0.00052 19.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 ORF12739 - 0.00062 20.1 0.1 0.0015 18.9 0.1 1.6 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain Sigma70_ECF PF07638.11 ORF12739 - 0.0018 18.2 0.1 0.002 18.1 0.1 1.1 1 0 0 1 1 1 1 ECF sigma factor Sigma70_r4_2 PF08281.12 ORF12739 - 0.003 17.2 0.1 0.0061 16.2 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_19 PF12844.7 ORF12739 - 0.0034 17.4 0.0 0.0048 16.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 ORF12739 - 0.0059 16.5 0.1 0.011 15.6 0.0 1.5 1 1 0 1 1 1 1 MarR family HTH_5 PF01022.20 ORF12739 - 0.011 15.6 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family KORA PF16509.5 ORF12739 - 0.012 15.9 0.1 0.018 15.3 0.1 1.4 1 1 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_20 PF12840.7 ORF12739 - 0.017 15.2 0.2 0.043 13.9 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 ORF12739 - 0.018 14.8 0.5 0.03 14.1 0.1 1.6 2 0 0 2 2 1 0 IclR helix-turn-helix domain DUF3071 PF11268.8 ORF12739 - 0.028 14.5 0.2 0.032 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3071) HTH_6 PF01418.17 ORF12739 - 0.035 14.1 0.1 0.057 13.4 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain, rpiR family Rrf2 PF02082.20 ORF12739 - 0.036 14.4 0.1 0.054 13.8 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_Crp_2 PF13545.6 ORF12739 - 0.041 13.9 0.2 0.057 13.4 0.2 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 ORF12739 - 0.054 13.7 0.2 0.074 13.3 0.2 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_Tnp_4 PF13613.6 ORF12739 - 0.058 13.1 0.0 0.094 12.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_28 PF13518.6 ORF12739 - 0.06 13.5 0.1 0.13 12.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 ORF12739 - 0.071 12.9 0.1 0.14 12.1 0.1 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_1 PF00126.27 ORF12739 - 0.079 12.9 0.6 0.6 10.1 0.1 2.2 1 1 1 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family Cation_ATPase_C PF00689.21 ORF11882 - 0.0016 18.2 1.8 0.0034 17.1 0.1 1.9 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus DUF3276 PF11680.8 ORF111606 - 0.029 14.5 0.4 0.034 14.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3276) SL4P PF17618.2 ORF111041 - 0.039 14.0 0.1 0.061 13.4 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized Strongylid L4 protein STIMATE PF12400.8 ORF110613 - 4.8e-12 46.5 4.8 6.5e-12 46.1 4.8 1.2 1 0 0 1 1 1 1 STIMATE family MORN PF02493.20 ORF110232 - 1.2e-11 43.8 15.9 5.2e-06 26.0 1.3 4.0 5 0 0 5 5 5 3 MORN repeat Ank_4 PF13637.6 ORF110060 - 6.7e-14 52.1 0.0 4.2e-08 33.6 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF110060 - 5.5e-13 49.3 0.1 2.7e-11 43.9 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF110060 - 2.5e-11 43.5 0.0 1.8e-05 24.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF110060 - 9.5e-11 41.7 0.2 3.7e-05 23.9 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF110060 - 6.5e-09 35.3 0.0 0.008 16.6 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeat CBM_1 PF00734.18 ORF109957 - 0.052 13.5 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Fungal cellulose binding domain GNAT_C PF18164.1 ORF109862 - 0.19 11.5 0.1 0.2 11.3 0.1 1.1 1 0 0 1 1 1 0 GNAT-like C-terminal domain Atg8 PF02991.16 ORF109774 - 1.2e-24 86.5 0.0 1.4e-24 86.3 0.0 1.1 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF109774 - 0.016 15.6 0.0 0.022 15.2 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-like autophagy protein Apg12 PsbK PF02533.15 ORF109752 - 1e-20 73.6 6.5 2.2e-20 72.5 6.5 1.6 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component DUF2706 PF10913.8 ORF109647 - 0.14 12.1 0.4 0.21 11.5 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2706) SipA_VBS PF17985.1 ORF109470 - 0.059 13.3 0.1 0.09 12.7 0.1 1.2 1 0 0 1 1 1 0 SipA vinculin binding site ORC4_C PF14629.6 ORF109470 - 0.14 11.5 2.5 0.18 11.1 2.5 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus PaO PF08417.12 ORF109141 - 0.14 12.3 0.5 0.35 11.0 0.2 1.7 1 1 1 2 2 2 0 Pheophorbide a oxygenase BPD_transp_2 PF02653.16 ORF108528 - 1.3e-18 67.1 13.1 1.5e-18 66.9 13.1 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component PIG-U PF06728.13 ORF108402 - 1.4e-06 27.7 1.4 1.9e-06 27.2 1.4 1.2 1 0 0 1 1 1 1 GPI transamidase subunit PIG-U Pfg27 PF09216.10 ORF10809 - 0.047 13.5 2.7 0.056 13.3 2.7 1.1 1 0 0 1 1 1 0 Pfg27 Peptidase_C1 PF00112.23 ORF107742 - 0.00026 21.2 0.2 0.00031 20.9 0.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease PHD_4 PF16866.5 ORF10734 - 0.38 10.9 6.7 0.67 10.1 6.8 1.4 1 1 0 1 1 1 0 PHD-finger RNA_pol_Rpb2_6 PF00562.28 ORF105967 - 7.4e-23 81.2 0.3 8.6e-23 81.0 0.3 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 ORF105967 - 1.3e-17 64.0 0.1 1.7e-17 63.6 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 Ank_4 PF13637.6 ORF105821 - 1.8e-18 66.6 0.9 4.5e-12 46.2 0.1 2.6 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF105821 - 5.5e-18 65.3 0.1 9.5e-18 64.6 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF105821 - 1.1e-15 56.2 0.2 1.1e-06 28.5 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF105821 - 1.9e-15 56.5 0.4 6.2e-07 29.6 0.1 2.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF105821 - 1e-12 48.0 0.1 6.4e-06 26.3 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) PsbK PF02533.15 ORF105245 - 1e-20 73.6 6.5 2.2e-20 72.5 6.5 1.6 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component Glyco_trans_1_4 PF13692.6 ORF104609 - 0.019 15.4 0.3 0.026 14.9 0.3 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 RIBIOP_C PF04950.12 ORF104302 - 2.2e-40 138.9 0.1 2.5e-40 138.7 0.1 1.0 1 0 0 1 1 1 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal CarbpepA_inh PF02977.15 ORF103515 - 0.088 12.6 0.5 0.12 12.2 0.5 1.2 1 0 0 1 1 1 0 Carboxypeptidase A inhibitor DUF3316 PF11777.8 ORF10234 - 0.065 13.3 1.2 0.077 13.1 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3316) Ank_4 PF13637.6 ORF101964 - 1.8e-18 66.6 0.9 4.5e-12 46.2 0.1 2.6 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF101964 - 5.5e-18 65.3 0.1 9.5e-18 64.6 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF101964 - 1.1e-15 56.2 0.2 1.1e-06 28.5 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF101964 - 1.9e-15 56.5 0.4 6.2e-07 29.6 0.1 2.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF101964 - 1e-12 48.0 0.1 6.4e-06 26.3 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Kelch_3 PF13415.6 ORF100786 - 0.29 11.5 0.0 0.29 11.5 0.0 1.9 2 1 0 2 2 2 0 Galactose oxidase, central domain CCER1 PF15482.6 ORF10075 - 0.077 12.9 3.5 0.084 12.8 3.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 KRTAP PF11759.8 ORF100609 - 4.6 7.8 7.1 90 3.7 7.1 2.1 1 1 0 1 1 1 0 Keratin-associated matrix DUF640 PF04852.12 ORF100609 - 5.8 7.1 6.4 11 6.1 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF640) TEX13 PF15186.6 ORF100454 - 0.0056 16.4 0.7 0.0062 16.2 0.7 1.3 1 1 0 1 1 1 1 Testis-expressed sequence 13 protein family FmiP_Thoc5 PF09766.9 ORF100454 - 0.018 14.4 6.0 0.025 13.9 6.0 1.2 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 SKA2 PF16740.5 ORF100454 - 0.03 14.1 6.1 0.059 13.2 6.1 1.6 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 IZUMO PF15005.6 ORF100454 - 0.046 14.2 6.2 0.05 14.1 6.2 1.1 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DUF465 PF04325.13 ORF100454 - 1.5 8.9 9.8 0.93 9.6 5.9 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF465) Dioxygenase_N PF04444.14 ORF100058 - 0.13 12.1 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Catechol dioxygenase N terminus zf-C2H2_11 PF16622.5 NODE_59876_length_277_cov_1.082645_g51936_i0reverse_frame_1 - 1.4 8.7 4.3 0.91 9.3 1.1 2.1 2 0 0 2 2 2 0 zinc-finger C2H2-type Sulfate_transp PF00916.20 NODE_59875_length_277_cov_1.095041_g51935_i0forward_frame_1 - 0.017 13.9 0.7 0.021 13.6 0.7 1.1 1 0 0 1 1 1 0 Sulfate permease family Put_Phosphatase PF06888.12 NODE_59873_length_277_cov_1.169421_g51933_i0forward_frame_1 - 0.16 11.4 0.1 0.19 11.1 0.1 1.1 1 0 0 1 1 1 0 Putative Phosphatase BBP1_N PF15271.6 NODE_59872_length_277_cov_1.219008_g51932_i0reverse_frame_1 - 0.018 15.8 1.9 0.021 15.6 1.9 1.0 1 0 0 1 1 1 0 Spindle pole body component BBP1, Mps2-binding protein DUF3573 PF12097.8 NODE_59872_length_277_cov_1.219008_g51932_i0reverse_frame_1 - 0.059 12.2 1.5 0.065 12.1 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DUF2304 PF10066.9 NODE_59872_length_277_cov_1.219008_g51932_i0forward_frame_1 - 0.012 15.8 2.9 0.013 15.7 2.9 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) DUF2083 PF09856.9 NODE_59871_length_277_cov_1.243802_g51931_i0forward_frame_1 - 0.019 14.8 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 Predicted transcriptional regulator (DUF2083) ACT PF01842.25 NODE_59870_length_277_cov_1.268595_g51930_i0reverse_frame_1 - 4.7e-05 23.1 0.1 7.3e-05 22.5 0.1 1.3 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.6 NODE_59870_length_277_cov_1.268595_g51930_i0reverse_frame_1 - 0.0054 16.5 0.0 0.0085 15.9 0.0 1.3 1 0 0 1 1 1 1 ACT domain SecD-TM1 PF13721.6 NODE_59870_length_277_cov_1.268595_g51930_i0reverse_frame_1 - 0.064 13.7 0.1 0.14 12.6 0.1 1.4 1 1 1 2 2 2 0 SecD export protein N-terminal TM region DUF1765 PF08578.10 NODE_59868_length_277_cov_1.380165_g51928_i0reverse_frame_1 - 0.0093 16.4 1.6 0.011 16.2 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1765) DUF4015 PF13200.6 NODE_59864_length_277_cov_1.425620_g51924_i0reverse_frame_1 - 0.13 11.3 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 Putative glycosyl hydrolase domain Utp14 PF04615.13 NODE_59848_length_277_cov_1.760331_g51908_i0reverse_frame_1 - 0.022 13.4 6.1 0.026 13.1 6.1 1.3 1 1 0 1 1 1 0 Utp14 protein Poty_coat PF00767.18 NODE_59848_length_277_cov_1.760331_g51908_i0reverse_frame_1 - 0.078 12.5 1.9 0.13 11.8 0.4 1.7 1 1 1 2 2 2 0 Potyvirus coat protein DUF1053 PF06327.14 NODE_59848_length_277_cov_1.760331_g51908_i0reverse_frame_1 - 0.27 11.8 2.6 0.34 11.5 2.5 1.3 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1053) FAD-SLDH PF12318.8 NODE_59840_length_277_cov_1.917355_g51900_i0reverse_frame_1 - 0.025 14.6 0.1 0.036 14.1 0.1 1.3 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase CCDC92 PF14916.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.0027 17.4 4.2 0.0027 17.4 4.2 2.3 2 1 0 2 2 2 1 Coiled-coil domain of unknown function DUF4404 PF14357.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.018 15.6 4.0 0.035 14.7 3.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) DUF1132 PF06575.12 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.037 14.4 0.6 0.087 13.2 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1132) Tropomyosin_1 PF12718.7 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.043 14.0 10.2 0.051 13.7 10.2 1.2 1 0 0 1 1 1 0 Tropomyosin like Prefoldin_2 PF01920.20 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.05 13.6 2.9 0.05 13.6 2.9 2.2 2 0 0 2 2 2 0 Prefoldin subunit MRF_C1 PF13887.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.09 12.0 1.6 4.9 6.4 0.2 2.5 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 OmpH PF03938.14 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.11 12.9 9.8 0.12 12.8 9.8 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4515 PF14988.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.17 11.7 12.8 0.92 9.3 2.7 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4515) FdhE PF04216.12 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.25 11.2 1.5 0.27 11.1 1.5 1.0 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation DUF1664 PF07889.12 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.47 10.5 7.8 1.1 9.3 4.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FapA PF03961.13 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.49 9.0 8.5 0.54 8.8 8.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4446 PF14584.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.77 9.7 4.2 1 9.3 3.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) DUF2802 PF10975.8 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.85 9.8 5.7 2.2 8.5 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2802) Atg14 PF10186.9 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 1.8 7.6 7.5 2.3 7.2 7.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 SlyX PF04102.12 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 1.9 9.2 9.3 61 4.3 9.3 2.3 1 1 0 1 1 1 0 SlyX ABC_tran_CTD PF16326.5 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 1.9 8.8 12.3 8 6.8 10.6 2.5 1 1 1 2 2 2 0 ABC transporter C-terminal domain Fungal_TACC PF12709.7 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 2.8 8.4 10.7 0.85 10.1 1.6 2.3 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins FlaC_arch PF05377.11 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 8.4 6.9 9.4 2.2e+03 -0.9 9.4 2.8 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) NDUFB10 PF10249.9 NODE_59827_length_277_cov_2.041322_g51887_i0reverse_frame_1 - 0.012 16.1 0.1 0.014 15.9 0.1 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit 10 PP2C PF00481.21 NODE_59823_length_277_cov_2.115702_g51883_i0forward_frame_1 - 5.8e-10 39.2 0.0 6.7e-10 39.0 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Nepo_coat_N PF03689.15 NODE_59812_length_277_cov_2.495868_g51872_i0reverse_frame_1 - 0.099 12.6 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain RRS1 PF04939.12 NODE_59811_length_277_cov_2.524793_g51871_i0forward_frame_1 - 0.0013 18.6 0.1 0.0015 18.5 0.1 1.1 1 0 0 1 1 1 1 Ribosome biogenesis regulatory protein (RRS1) DUF443 PF04276.12 NODE_59808_length_277_cov_2.595041_g51868_i0reverse_frame_1 - 0.017 15.0 3.6 0.019 14.8 3.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF443) PP2C PF00481.21 NODE_59803_length_277_cov_2.863636_g51863_i0forward_frame_1 - 1.5e-06 28.0 0.0 1.8e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C ELH PF02323.15 NODE_59802_length_277_cov_2.966942_g51862_i0forward_frame_1 - 0.28 10.5 0.6 0.3 10.4 0.6 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor DUF1857 PF08982.11 NODE_59793_length_277_cov_6.743802_g51853_i0reverse_frame_1 - 0.075 12.9 0.1 0.082 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1857) DUF4818 PF16089.5 NODE_59788_length_277_cov_42.078512_g51848_i0forward_frame_1 - 0.028 14.9 0.8 0.045 14.2 0.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4818) Ada3 PF10198.9 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_1 - 0.74 10.0 10.0 0.86 9.8 10.0 1.2 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 DUF1764 PF08576.10 NODE_59779_length_277_cov_51.719008_g51839_i0reverse_frame_1 - 0.043 14.7 0.9 0.054 14.4 0.9 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF1764) LapD_MoxY_N PF16448.5 NODE_59775_length_277_cov_55.260331_g51835_i0reverse_frame_1 - 0.00088 19.1 0.1 0.0011 18.8 0.1 1.2 1 0 0 1 1 1 1 LapD/MoxY periplasmic domain Raftlin PF15250.6 NODE_59774_length_277_cov_55.404959_g51834_i0reverse_frame_1 - 6.3 5.4 12.6 6.3 5.4 12.6 1.0 1 0 0 1 1 1 0 Raftlin ApbA_C PF08546.11 NODE_59773_length_277_cov_55.892562_g51833_i0reverse_frame_1 - 0.083 13.1 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA C terminal Toprim_2 PF13155.6 NODE_59771_length_277_cov_58.198347_g51831_i0forward_frame_1 - 0.03 14.8 0.1 0.034 14.6 0.1 1.1 1 0 0 1 1 1 0 Toprim-like V-SNARE PF05008.15 NODE_59762_length_277_cov_72.107438_g51822_i0forward_frame_1 - 0.16 12.4 0.0 0.22 11.9 0.0 1.2 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus YycH PF07435.11 NODE_59760_length_277_cov_74.929752_g51820_i0forward_frame_1 - 0.24 10.3 0.0 0.27 10.1 0.0 1.0 1 0 0 1 1 1 0 YycH protein Orthoreo_P10 PF07204.11 NODE_59757_length_277_cov_77.747934_g51817_i0reverse_frame_1 - 0.0062 16.5 0.0 0.0069 16.3 0.0 1.1 1 0 0 1 1 1 1 Orthoreovirus membrane fusion protein p10 TMEM169 PF15052.6 NODE_59752_length_277_cov_83.504132_g51812_i0reverse_frame_1 - 0.013 15.6 1.0 0.018 15.1 1.0 1.2 1 0 0 1 1 1 0 TMEM169 protein family PaO PF08417.12 NODE_59751_length_277_cov_83.954545_g51811_i0reverse_frame_1 - 0.058 13.5 0.0 0.062 13.4 0.0 1.2 1 0 0 1 1 1 0 Pheophorbide a oxygenase DUF3784 PF12650.7 NODE_59751_length_277_cov_83.954545_g51811_i0forward_frame_1 - 0.06 13.6 0.1 0.068 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) PSK PF06404.12 NODE_59745_length_277_cov_105.177686_g51805_i0reverse_frame_1 - 0.1 13.6 2.3 0.1 13.6 2.3 1.7 2 0 0 2 2 2 0 Phytosulfokine precursor protein (PSK) DUF2371 PF10177.9 NODE_59737_length_277_cov_180.103306_g51797_i0forward_frame_1 - 0.011 15.9 0.3 0.014 15.6 0.3 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) DUF21 PF01595.20 NODE_59735_length_277_cov_193.037190_g51795_i0forward_frame_1 - 0.059 13.1 0.0 0.075 12.7 0.0 1.2 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain DUF5408 PF17402.2 NODE_59728_length_277_cov_277.504132_g51788_i0reverse_frame_1 - 0.029 14.3 2.8 0.58 10.1 0.2 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5408) Asp PF00026.23 NODE_59727_length_277_cov_300.280992_g51787_i0forward_frame_1 - 0.067 12.6 0.0 0.067 12.6 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic aspartyl protease Thiolase_C PF02803.18 NODE_59721_length_277_cov_2493.847107_g51781_i0reverse_frame_1 - 0.11 12.2 1.0 0.15 11.7 1.0 1.2 1 0 0 1 1 1 0 Thiolase, C-terminal domain Peptidase_C1 PF00112.23 NODE_59719_length_277_cov_6841.731405_g51779_i0reverse_frame_1 - 1e-12 48.6 0.9 1.1e-12 48.5 0.9 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_59719_length_277_cov_6841.731405_g51779_i0reverse_frame_1 - 0.00038 19.4 0.2 0.00039 19.3 0.2 1.0 1 0 0 1 1 1 1 Peptidase C1-like family TLC PF03219.14 NODE_59718_length_277_cov_63829.268595_g51778_i0reverse_frame_1 - 0.15 10.7 6.9 0.19 10.4 6.9 1.0 1 0 0 1 1 1 0 TLC ATP/ADP transporter AzlC PF03591.14 NODE_59715_length_278_cov_1.004115_g51775_i0reverse_frame_1 - 0.085 13.3 0.1 0.094 13.2 0.1 1.1 1 0 0 1 1 1 0 AzlC protein Renin_r PF07850.14 NODE_59713_length_278_cov_1.127572_g51773_i0reverse_frame_1 - 0.24 12.0 0.5 0.24 12.0 0.5 2.0 1 1 1 2 2 2 0 Renin receptor-like protein Toxin_GhoT_OrtT PF10753.9 NODE_59711_length_278_cov_1.152263_g51771_i0forward_frame_1 - 0.083 13.1 0.2 0.083 13.1 0.2 1.8 2 0 0 2 2 2 0 Toxin GhoT_OrtT RNA_pol_Rpb2_5 PF04567.17 NODE_59709_length_278_cov_1.230453_g51769_i0reverse_frame_1 - 2.2e-17 63.4 1.6 4.3e-17 62.4 1.6 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpb2_6 PF00562.28 NODE_59709_length_278_cov_1.230453_g51769_i0reverse_frame_1 - 1.8e-09 37.2 0.1 2.1e-09 36.9 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 Leg1 PF05612.12 NODE_59709_length_278_cov_1.230453_g51769_i0reverse_frame_1 - 0.07 12.3 0.1 0.11 11.6 0.1 1.3 1 0 0 1 1 1 0 Leg1 Rubredoxin_2 PF18073.1 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 1.1e-07 31.4 9.7 1.5e-07 31.0 9.7 1.2 1 0 0 1 1 1 1 Rubredoxin metal binding domain ATPase PF06745.13 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 4.8e-05 22.8 2.0 6.4e-05 22.4 2.0 1.2 1 0 0 1 1 1 1 KaiC Rad51 PF08423.11 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 0.00023 20.5 0.2 0.00026 20.3 0.2 1.1 1 0 0 1 1 1 1 Rad51 CDH-cyt PF16010.5 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 0.013 15.2 1.0 0.014 15.1 1.0 1.1 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase PAXNEB PF05625.11 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 0.029 13.5 0.1 0.035 13.2 0.1 1.2 1 0 0 1 1 1 0 PAXNEB protein AAA_25 PF13481.6 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 0.085 12.4 0.1 0.1 12.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain SR-25 PF10500.9 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_1 - 3.9 7.0 7.0 4.3 6.9 7.0 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DivIC PF04977.15 NODE_59693_length_278_cov_1.543210_g51753_i0reverse_frame_1 - 0.14 12.0 2.2 0.18 11.6 2.2 1.1 1 0 0 1 1 1 0 Septum formation initiator DDE_Tnp_ISAZ013 PF07592.11 NODE_59693_length_278_cov_1.543210_g51753_i0reverse_frame_1 - 0.22 10.5 1.5 0.29 10.1 1.5 1.1 1 0 0 1 1 1 0 Rhodopirellula transposase DDE domain CK1gamma_C PF12605.8 NODE_59689_length_278_cov_1.592593_g51749_i0reverse_frame_1 - 0.14 13.3 4.0 0.17 13.1 4.0 1.1 1 0 0 1 1 1 0 Casein kinase 1 gamma C terminal DUF5453 PF17534.2 NODE_59686_length_278_cov_1.654321_g51746_i0reverse_frame_1 - 0.019 14.9 0.3 0.02 14.8 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5453) VP4_haemagglut PF00426.18 NODE_59684_length_278_cov_1.695473_g51744_i0reverse_frame_1 - 0.063 13.5 0.1 0.07 13.3 0.1 1.1 1 0 0 1 1 1 0 Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain Ubiq-Cytc-red_N PF09165.10 NODE_59683_length_278_cov_1.711934_g51743_i0reverse_frame_1 - 0.081 13.8 0.0 0.11 13.4 0.0 1.1 1 0 0 1 1 1 0 Ubiquinol-cytochrome c reductase 8 kDa, N-terminal PCRF PF03462.18 NODE_59683_length_278_cov_1.711934_g51743_i0reverse_frame_1 - 0.11 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 PCRF domain TEBP_beta PF07404.11 NODE_59682_length_278_cov_1.711934_g51742_i0reverse_frame_1 - 0.00059 19.3 0.2 0.00069 19.1 0.2 1.0 1 0 0 1 1 1 1 Telomere-binding protein beta subunit (TEBP beta) TPP1 PF10341.9 NODE_59682_length_278_cov_1.711934_g51742_i0reverse_frame_1 - 0.0037 17.2 0.1 0.0047 16.9 0.1 1.2 1 0 0 1 1 1 1 Shelterin complex subunit, TPP1/ACD GCM PF03615.15 NODE_59679_length_278_cov_1.748971_g51739_i0forward_frame_1 - 1.1 9.2 5.7 1.3 8.9 5.7 1.1 1 0 0 1 1 1 0 GCM motif protein DUF4100 PF13352.6 NODE_59676_length_278_cov_1.818930_g51736_i0forward_frame_1 - 4.6 7.0 7.0 5.3 6.7 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) DUF5531 PF17671.1 NODE_59673_length_278_cov_1.888889_g51733_i0forward_frame_1 - 0.7 9.8 2.5 0.91 9.4 2.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5531) EMP70 PF02990.16 NODE_59670_length_278_cov_1.958848_g51730_i0reverse_frame_1 - 0.66 8.6 15.0 0.76 8.4 15.0 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 NPR1_interact PF15699.5 NODE_59669_length_278_cov_1.971193_g51729_i0forward_frame_1 - 0.12 13.0 0.4 0.14 12.8 0.4 1.1 1 0 0 1 1 1 0 NPR1 interacting Sugar_tr PF00083.24 NODE_59668_length_278_cov_2.004115_g51728_i0reverse_frame_1 - 1.4e-11 43.9 0.0 1.4e-11 43.9 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter CNOT1_HEAT_N PF16419.5 NODE_59659_length_278_cov_2.209877_g51719_i0reverse_frame_1 - 0.03 14.0 0.2 0.031 13.9 0.2 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat Prolactin_RP PF15172.6 NODE_59653_length_278_cov_2.292181_g51713_i0forward_frame_1 - 0.099 12.3 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Prolactin-releasing peptide KAP PF05804.12 NODE_59648_length_278_cov_2.432099_g51708_i0reverse_frame_1 - 1.7e-20 72.8 0.2 1.8e-20 72.7 0.2 1.0 1 0 0 1 1 1 1 Kinesin-associated protein (KAP) Lambda_CIII PF02061.16 NODE_59648_length_278_cov_2.432099_g51708_i0reverse_frame_1 - 0.068 13.2 0.0 0.19 11.8 0.0 1.7 2 0 0 2 2 2 0 Lambda Phage CIII DUF2975 PF11188.8 NODE_59645_length_278_cov_2.551440_g51705_i0forward_frame_1 - 0.057 13.3 0.1 0.063 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) PBP_like_2 PF12849.7 NODE_59642_length_278_cov_2.905350_g51702_i0reverse_frame_1 - 5.1e-21 75.6 0.1 5.8e-21 75.4 0.1 1.0 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_1 PF01547.25 NODE_59642_length_278_cov_2.905350_g51702_i0reverse_frame_1 - 1.8e-05 24.9 0.2 1.9e-05 24.8 0.2 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 NODE_59642_length_278_cov_2.905350_g51702_i0reverse_frame_1 - 0.0026 16.9 0.0 0.0026 16.9 0.0 1.1 1 0 0 1 1 1 1 PBP superfamily domain PGPGW PF09656.10 NODE_59636_length_278_cov_3.432099_g51696_i0forward_frame_1 - 0.15 11.6 4.9 1.2 8.7 0.7 2.2 2 0 0 2 2 2 0 Putative transmembrane protein (PGPGW) NitrOD1 PF18549.1 NODE_59635_length_278_cov_3.456790_g51695_i0reverse_frame_1 - 0.18 11.8 0.0 0.32 11.0 0.0 1.3 1 0 0 1 1 1 0 Nitrosopumilus output domain 1 PGM_PMM_IV PF00408.20 NODE_59629_length_278_cov_23.794239_g51689_i0reverse_frame_1 - 7.9e-10 38.8 0.0 9.5e-10 38.5 0.0 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF4252 PF14060.6 NODE_59620_length_278_cov_46.205761_g51680_i0reverse_frame_1 - 0.052 13.5 0.4 0.063 13.2 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) CENP-T_C PF15511.6 NODE_59620_length_278_cov_46.205761_g51680_i0reverse_frame_1 - 0.063 13.4 0.1 0.075 13.2 0.1 1.3 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold PWI PF01480.17 NODE_59617_length_278_cov_50.444444_g51677_i0reverse_frame_1 - 0.00073 19.8 0.0 0.0011 19.3 0.0 1.2 1 0 0 1 1 1 1 PWI domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks255.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks255.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks255.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks255.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DNA_pol_phi PF04931.13 NODE_59607_length_278_cov_56.905350_g51667_i0forward_frame_1 - 5.1 5.1 17.9 5.1 5.1 17.9 1.1 1 0 0 1 1 1 0 DNA polymerase phi Ras PF00071.22 NODE_59597_length_278_cov_79.991770_g51657_i0forward_frame_1 - 2.1e-14 53.4 0.0 2.5e-14 53.2 0.0 1.1 1 0 0 1 1 1 1 Ras family UIM PF02809.20 NODE_59593_length_278_cov_95.781893_g51653_i0reverse_frame_1 - 0.00019 21.1 2.0 0.00019 21.1 2.0 3.4 4 2 0 4 4 4 1 Ubiquitin interaction motif RAP80_UIM PF18282.1 NODE_59593_length_278_cov_95.781893_g51653_i0reverse_frame_1 - 0.0031 17.2 1.7 0.0057 16.4 1.7 1.4 1 0 0 1 1 1 1 RAP80 N-terminal ubiquitin interaction motif DSPc PF00782.20 NODE_59585_length_278_cov_129.049383_g51645_i0forward_frame_1 - 8.5e-21 74.2 0.1 1.8e-20 73.1 0.0 1.5 1 1 1 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_59585_length_278_cov_129.049383_g51645_i0forward_frame_1 - 0.0026 17.4 0.3 0.0048 16.5 0.1 1.5 1 1 0 1 1 1 1 Protein-tyrosine phosphatase Vps52 PF04129.12 NODE_59577_length_278_cov_199.930041_g51637_i0forward_frame_1 - 0.05 12.3 6.7 0.061 12.0 6.7 1.0 1 0 0 1 1 1 0 Vps52 / Sac2 family Asp PF00026.23 NODE_59573_length_278_cov_588.267490_g51633_i0reverse_frame_1 - 3.8e-08 33.1 0.3 4.4e-08 32.9 0.3 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Fer2 PF00111.27 NODE_59570_length_278_cov_9207.518519_g51630_i0forward_frame_1 - 2.6e-05 24.1 0.1 2.6e-05 24.1 0.1 1.5 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain TMEM43 PF07787.12 NODE_59569_length_279_cov_0.872951_g51629_i0reverse_frame_1 - 0.0075 15.7 0.3 0.0079 15.6 0.3 1.0 1 0 0 1 1 1 1 Transmembrane protein 43 MaAIMP_sms PF16951.5 NODE_59565_length_279_cov_1.020492_g51625_i0reverse_frame_1 - 0.033 13.9 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Putative methionine and alanine importer, small subunit Ku_PK_bind PF08785.11 NODE_59562_length_279_cov_1.262295_g51622_i0forward_frame_1 - 0.013 15.7 0.1 0.014 15.6 0.1 1.1 1 0 0 1 1 1 0 Ku C terminal domain like zf-CCCH_2 PF14608.6 NODE_59560_length_279_cov_1.286885_g51620_i0reverse_frame_1 - 0.75 10.4 5.0 0.27 11.8 2.2 1.8 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger DHHC PF01529.20 NODE_59549_length_279_cov_1.487705_g51609_i0forward_frame_1 - 0.17 12.0 4.4 0.25 11.4 4.4 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Rad51 PF08423.11 NODE_59548_length_279_cov_1.549180_g51608_i0forward_frame_1 - 0.099 11.9 0.0 0.099 11.9 0.0 1.0 1 0 0 1 1 1 0 Rad51 LRRNT PF01462.18 NODE_59541_length_279_cov_1.635246_g51601_i0reverse_frame_1 - 0.077 12.7 0.1 0.12 12.0 0.1 1.2 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain CRIC_ras_sig PF10534.9 NODE_59535_length_279_cov_1.799180_g51595_i0forward_frame_1 - 0.0056 16.8 0.7 0.008 16.3 0.7 1.1 1 0 0 1 1 1 1 Connector enhancer of kinase suppressor of ras WAK_assoc PF14380.6 NODE_59533_length_279_cov_1.807377_g51593_i0reverse_frame_1 - 0.45 11.3 2.8 0.59 10.9 2.8 1.1 1 0 0 1 1 1 0 Wall-associated receptor kinase C-terminal O-antigen_lig PF13425.6 NODE_59533_length_279_cov_1.807377_g51593_i0reverse_frame_1 - 2.6 6.7 9.1 3.1 6.5 9.1 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Sec62 PF03839.16 NODE_59533_length_279_cov_1.807377_g51593_i0reverse_frame_1 - 4.3 6.8 11.2 4.8 6.6 11.2 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 E_raikovi_mat PF06360.11 NODE_59532_length_279_cov_1.807377_g51592_i0reverse_frame_1 - 1.7 9.1 4.2 26 5.3 0.3 2.6 3 0 0 3 3 3 0 Euplotes raikovi mating pheromone RAG1_imp_bd PF12560.8 NODE_59527_length_279_cov_1.909836_g51587_i0reverse_frame_1 - 0.051 13.1 0.0 0.054 13.0 0.0 1.0 1 0 0 1 1 1 0 RAG1 importin binding PriCT_1 PF08708.11 NODE_59519_length_279_cov_2.122951_g51579_i0forward_frame_1 - 0.063 13.0 0.1 0.091 12.5 0.1 1.2 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) Glutaminase PF04960.15 NODE_59518_length_279_cov_2.122951_g51578_i0forward_frame_1 - 2.4e-26 92.6 0.3 2.5e-26 92.5 0.3 1.0 1 0 0 1 1 1 1 Glutaminase Meckelin PF09773.9 NODE_59515_length_279_cov_2.172131_g51575_i0reverse_frame_1 - 0.069 11.2 0.7 0.078 11.1 0.7 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) VIT_2 PF13757.6 NODE_59511_length_279_cov_2.405738_g51571_i0reverse_frame_1 - 0.01 15.7 0.7 0.017 15.0 0.7 1.3 1 0 0 1 1 1 0 Vault protein inter-alpha-trypsin domain DUF2254 PF10011.9 NODE_59506_length_279_cov_2.516393_g51566_i0forward_frame_1 - 0.011 14.5 0.2 0.013 14.4 0.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) MatE PF01554.18 NODE_59503_length_279_cov_2.672131_g51563_i0reverse_frame_1 - 5.1e-10 39.2 4.4 6.1e-10 39.0 4.4 1.1 1 0 0 1 1 1 1 MatE Fumarate_red_C PF02300.17 NODE_59503_length_279_cov_2.672131_g51563_i0reverse_frame_1 - 0.012 15.7 0.3 0.014 15.5 0.3 1.3 1 1 0 1 1 1 0 Fumarate reductase subunit C Rotamase PF00639.21 NODE_59503_length_279_cov_2.672131_g51563_i0forward_frame_1 - 0.027 15.4 0.1 0.031 15.2 0.1 1.1 1 0 0 1 1 1 0 PPIC-type PPIASE domain C2 PF00168.30 NODE_59500_length_279_cov_2.782787_g51560_i0forward_frame_1 - 1.7e-07 31.5 0.0 1.9e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 C2 domain Csc2 PF18320.1 NODE_59498_length_279_cov_2.926230_g51558_i0reverse_frame_1 - 0.076 12.0 0.0 0.087 11.8 0.0 1.2 1 0 0 1 1 1 0 Csc2 Crispr Goodbye PF17109.5 NODE_59484_length_279_cov_20.434426_g51544_i0forward_frame_1 - 0.0035 17.8 0.2 0.0044 17.5 0.2 1.1 1 0 0 1 1 1 1 fungal STAND N-terminal Goodbye domain Sec62 PF03839.16 NODE_59480_length_279_cov_33.036885_g51540_i0forward_frame_1 - 1.2 8.6 9.1 2.4 7.6 9.1 1.5 1 1 0 1 1 1 0 Translocation protein Sec62 Sybindin PF04099.12 NODE_59464_length_279_cov_64.758197_g51524_i0reverse_frame_1 - 2.5e-06 27.5 0.0 3.7e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Sybindin-like family DUF3127 PF11325.8 NODE_59453_length_279_cov_75.229508_g51513_i0forward_frame_1 - 0.19 12.0 0.0 0.23 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3127) MadM PF03818.13 NODE_59452_length_279_cov_77.286885_g51512_i0reverse_frame_1 - 0.074 12.9 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Malonate/sodium symporter MadM subunit BPS1 PF05633.11 NODE_59441_length_279_cov_114.463115_g51501_i0forward_frame_1 - 0.012 14.7 0.4 0.016 14.2 0.4 1.2 1 0 0 1 1 1 0 Protein BYPASS1-related Phage_holin_T PF11031.8 NODE_59438_length_279_cov_117.262295_g51498_i0forward_frame_1 - 0.2 11.1 1.0 0.23 10.9 1.0 1.1 1 0 0 1 1 1 0 Bacteriophage T holin Imm40 PF15569.6 NODE_59437_length_279_cov_121.069672_g51497_i0reverse_frame_1 - 0.037 14.1 0.3 0.043 13.9 0.3 1.2 1 0 0 1 1 1 0 Immunity protein 40 CLIP PF12032.8 NODE_59437_length_279_cov_121.069672_g51497_i0forward_frame_1 - 0.12 12.7 0.5 0.21 11.9 0.5 1.4 1 0 0 1 1 1 0 Regulatory CLIP domain of proteinases AZUL PF16558.5 NODE_59429_length_279_cov_197.217213_g51489_i0forward_frame_1 - 0.69 10.2 5.4 2.9 8.2 2.6 2.1 1 1 1 2 2 2 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A RCC1_2 PF13540.6 NODE_59428_length_279_cov_214.102459_g51488_i0reverse_frame_1 - 7.7e-06 25.6 1.3 0.021 14.6 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 NODE_59428_length_279_cov_214.102459_g51488_i0reverse_frame_1 - 0.27 9.7 0.2 0.45 9.0 0.2 1.4 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Apo-CIII PF05778.12 NODE_59428_length_279_cov_214.102459_g51488_i0reverse_frame_1 - 0.29 10.8 0.9 6.5 6.5 0.1 2.1 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) PheRS_DBD2 PF18554.1 NODE_59428_length_279_cov_214.102459_g51488_i0reverse_frame_1 - 3.8 7.6 5.9 8.2 6.5 0.8 2.4 2 0 0 2 2 2 0 PheRS DNA binding domain 2 CwsA PF10814.8 NODE_59424_length_279_cov_621.815574_g51484_i0reverse_frame_1 - 0.049 13.8 0.0 0.055 13.6 0.0 1.0 1 0 0 1 1 1 0 Cell wall synthesis protein CwsA Alginate_exp PF13372.6 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_1 - 0.0095 14.7 1.8 5.4 5.6 0.0 2.9 1 1 1 3 3 3 3 Alginate export Proteasom_Rpn13 PF04683.13 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_1 - 0.041 14.4 0.3 4 8.0 0.1 2.8 1 1 1 2 2 2 0 Proteasome complex subunit Rpn13 ubiquitin receptor DUF2149 PF09919.9 NODE_59419_length_279_cov_2197.868852_g51479_i0reverse_frame_1 - 0.068 13.4 0.2 0.088 13.1 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) IL13 PF03487.13 NODE_59416_length_280_cov_0.975510_g51476_i0forward_frame_2 - 0.074 12.8 0.0 0.087 12.6 0.0 1.1 1 0 0 1 1 1 0 Interleukin-13 Ldh_1_N PF00056.23 NODE_59411_length_280_cov_1.253061_g51471_i0reverse_frame_2 - 0.00011 22.3 0.0 0.00017 21.7 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain TRIQK PF15168.6 NODE_59411_length_280_cov_1.253061_g51471_i0forward_frame_2 - 0.44 10.5 2.1 0.6 10.1 2.1 1.3 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family Ion_trans PF00520.31 NODE_59410_length_280_cov_1.253061_g51470_i0forward_frame_2 - 4.5e-06 26.1 0.2 5.3e-06 25.8 0.2 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 NODE_59410_length_280_cov_1.253061_g51470_i0forward_frame_2 - 0.0092 15.9 6.4 0.012 15.5 5.6 1.8 1 1 0 1 1 1 1 Ion channel GDYXXLXY PF14345.6 NODE_59407_length_280_cov_1.302041_g51467_i0reverse_frame_2 - 0.053 13.3 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 GDYXXLXY protein RecX PF02631.16 NODE_59406_length_280_cov_1.302041_g51466_i0reverse_frame_2 - 0.04 14.4 0.7 0.052 14.0 0.7 1.1 1 0 0 1 1 1 0 RecX family EF-hand_1 PF00036.32 NODE_59401_length_280_cov_1.469388_g51461_i0forward_frame_3 - 0.0001 21.6 0.2 0.00017 20.9 0.2 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_59401_length_280_cov_1.469388_g51461_i0forward_frame_3 - 0.0023 17.7 0.1 0.0041 16.9 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_59401_length_280_cov_1.469388_g51461_i0forward_frame_3 - 0.01 16.3 0.1 0.016 15.7 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain pair DNase_II PF03265.15 NODE_59400_length_280_cov_1.469388_g51460_i0reverse_frame_2 - 0.0022 17.3 3.5 0.0022 17.3 3.5 1.5 1 1 1 2 2 2 1 Deoxyribonuclease II DUF4710 PF15828.5 NODE_59400_length_280_cov_1.469388_g51460_i0reverse_frame_2 - 0.22 11.7 7.7 0.31 11.2 7.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DUF3974 PF13120.6 NODE_59400_length_280_cov_1.469388_g51460_i0forward_frame_3 - 0.13 12.4 0.2 0.14 12.2 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) DUF4713 PF15831.5 NODE_59400_length_280_cov_1.469388_g51460_i0forward_frame_2 - 0.041 14.3 11.0 0.064 13.7 11.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) Sec62 PF03839.16 NODE_59399_length_280_cov_1.493878_g51459_i0forward_frame_2 - 4.4e-05 23.1 2.3 4.4e-05 23.1 2.3 1.4 1 1 0 1 1 1 1 Translocation protein Sec62 Ephrin_rec_like PF07699.13 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 0.0026 17.5 24.1 0.26 11.1 3.2 3.8 1 1 3 4 4 4 4 Putative ephrin-receptor like NCD3G PF07562.14 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 0.0033 17.4 14.8 0.1 12.6 3.5 3.2 1 1 3 4 4 4 4 Nine Cysteines Domain of family 3 GPCR PKD_channel PF08016.12 NODE_59396_length_280_cov_1.575510_g51456_i0forward_frame_3 - 3e-06 26.2 12.6 3.6e-06 25.9 12.6 1.0 1 0 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 NODE_59396_length_280_cov_1.575510_g51456_i0forward_frame_3 - 0.0077 15.5 15.3 0.0094 15.2 15.3 1.1 1 0 0 1 1 1 1 Ion transport protein DUF702 PF05142.12 NODE_59393_length_280_cov_1.612245_g51453_i0reverse_frame_3 - 0.0011 19.5 6.0 0.0011 19.5 6.0 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF702) Clusterin PF01093.17 NODE_59393_length_280_cov_1.612245_g51453_i0reverse_frame_3 - 3.8 6.4 4.5 4.1 6.4 4.5 1.0 1 0 0 1 1 1 0 Clusterin Flp1_like PF16982.5 NODE_59392_length_280_cov_1.616327_g51452_i0forward_frame_3 - 0.67 9.4 3.1 11 5.5 0.0 2.1 2 0 0 2 2 2 0 Putative Flagellin, Flp1-like, domain Tom7 PF08038.12 NODE_59385_length_280_cov_1.677551_g51445_i0reverse_frame_3 - 0.03 14.0 0.1 0.048 13.3 0.1 1.4 1 0 0 1 1 1 0 TOM7 family Omp_AT PF11557.8 NODE_59381_length_280_cov_1.710204_g51441_i0reverse_frame_3 - 0.17 10.8 0.1 0.21 10.5 0.1 1.1 1 0 0 1 1 1 0 Solitary outer membrane autotransporter beta-barrel domain NB PF04159.13 NODE_59381_length_280_cov_1.710204_g51441_i0forward_frame_2 - 0.13 12.3 2.1 0.17 11.9 2.1 1.2 1 0 0 1 1 1 0 NB glycoprotein RNA_pol_Rpb1_2 PF00623.20 NODE_59380_length_280_cov_1.742857_g51440_i0reverse_frame_2 - 0.029 14.6 0.0 0.032 14.5 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 2 FOLN PF09289.10 NODE_59379_length_280_cov_1.755102_g51439_i0reverse_frame_2 - 0.015 15.5 0.4 0.023 14.9 0.4 1.3 1 0 0 1 1 1 0 Follistatin/Osteonectin-like EGF domain zf-C2HC5 PF06221.13 NODE_59379_length_280_cov_1.755102_g51439_i0reverse_frame_2 - 0.13 12.3 4.6 0.19 11.7 4.6 1.3 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type MADF_DNA_bdg PF10545.9 NODE_59378_length_280_cov_1.755102_g51438_i0reverse_frame_3 - 0.26 11.6 2.2 1.7 9.1 0.1 2.1 1 1 1 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like TPR_12 PF13424.6 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 7.8e-10 38.9 0.0 1e-09 38.5 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 0.00091 19.0 0.1 0.016 15.0 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 0.00092 19.0 0.0 0.0058 16.5 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 0.012 15.8 0.3 0.28 11.5 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 0.16 12.0 0.0 0.37 10.9 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat Sprouty PF05210.13 NODE_59371_length_280_cov_2.008163_g51431_i0reverse_frame_2 - 0.43 11.0 6.6 0.51 10.7 6.6 1.1 1 0 0 1 1 1 0 Sprouty protein (Spry) DASH_Duo1 PF08651.10 NODE_59371_length_280_cov_2.008163_g51431_i0forward_frame_3 - 0.021 14.6 0.0 0.03 14.1 0.0 1.4 1 1 0 1 1 1 0 DASH complex subunit Duo1 Glyco_hydro_20 PF00728.22 NODE_59363_length_280_cov_2.175510_g51423_i0reverse_frame_2 - 3.4e-27 95.8 0.0 3.8e-27 95.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain Inhibitor_I42 PF09394.10 NODE_59362_length_280_cov_2.187755_g51422_i0forward_frame_2 - 0.14 12.6 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 Chagasin family peptidase inhibitor I42 Ribosomal_S27e PF01667.17 NODE_59361_length_280_cov_2.191837_g51421_i0forward_frame_2 - 0.025 14.3 0.1 0.26 11.0 0.0 2.2 2 0 0 2 2 2 0 Ribosomal protein S27 HTH_DeoR PF08220.12 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 3.1e-17 62.1 0.1 4.1e-17 61.7 0.1 1.1 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain GntR PF00392.21 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 3.9e-06 26.4 0.1 5.3e-06 26.0 0.1 1.1 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 1.4e-05 24.9 0.0 1.8e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.002 18.0 0.0 0.0026 17.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family FeoC PF09012.10 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.0039 17.2 0.0 0.0049 16.9 0.0 1.1 1 0 0 1 1 1 1 FeoC like transcriptional regulator DUF1670 PF07900.11 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.011 15.1 0.0 0.012 15.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) MarR PF01047.22 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.037 14.0 0.0 0.053 13.5 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_24 PF13412.6 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.047 13.2 0.0 0.064 12.8 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Penicillinase_R PF03965.16 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.048 14.0 0.0 0.064 13.6 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor DUF977 PF06163.11 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.061 13.3 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) DDRGK PF09756.9 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.14 11.7 0.0 0.17 11.5 0.0 1.0 1 0 0 1 1 1 0 DDRGK domain DUF3925 PF13063.6 NODE_59353_length_280_cov_2.477551_g51413_i0forward_frame_3 - 0.1 12.8 2.3 0.18 12.1 0.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3925) CENP-T_N PF16171.5 NODE_59351_length_280_cov_2.497959_g51411_i0reverse_frame_3 - 0.15 10.9 0.0 0.17 10.8 0.0 1.1 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T N-terminus Tail_VII PF17091.5 NODE_59351_length_280_cov_2.497959_g51411_i0forward_frame_2 - 0.0076 16.1 0.1 0.014 15.2 0.1 1.4 1 0 0 1 1 1 1 Inovirus G7P protein SARG PF15385.6 NODE_59349_length_280_cov_2.506122_g51409_i0reverse_frame_3 - 0.017 14.4 0.3 0.017 14.4 0.3 1.0 1 0 0 1 1 1 0 Specifically androgen-regulated gene protein Toxin_5 PF05294.13 NODE_59348_length_280_cov_2.583673_g51408_i0forward_frame_3 - 6.3 7.3 8.7 0.72 10.3 4.3 1.7 2 0 0 2 2 2 0 Scorpion short toxin AstA PF04958.12 NODE_59348_length_280_cov_2.583673_g51408_i0forward_frame_2 - 4e-45 153.8 0.2 4.3e-45 153.7 0.2 1.0 1 0 0 1 1 1 1 Arginine N-succinyltransferase beta subunit Copine PF07002.16 NODE_59344_length_280_cov_2.795918_g51404_i0forward_frame_2 - 0.089 12.2 0.0 5.9 6.3 0.0 2.0 1 1 1 2 2 2 0 Copine DUF2574 PF10836.8 NODE_59338_length_280_cov_3.248980_g51398_i0reverse_frame_2 - 0.052 13.4 0.6 0.09 12.7 0.5 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2574) HscB_4_cys PF18256.1 NODE_59337_length_280_cov_3.314286_g51397_i0forward_frame_2 - 0.029 14.2 1.7 0.029 14.2 1.7 1.9 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif Penaeidin PF05927.11 NODE_59334_length_280_cov_3.808163_g51394_i0forward_frame_3 - 0.052 14.3 0.6 0.82 10.5 0.1 2.1 2 0 0 2 2 2 0 Penaeidin EPSP_synthase PF00275.20 NODE_59333_length_280_cov_4.657143_g51393_i0reverse_frame_3 - 5.1e-26 91.3 0.0 5.5e-26 91.2 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Lamprin PF06403.11 NODE_59331_length_280_cov_5.555102_g51391_i0reverse_frame_3 - 3.7 7.5 17.7 0.55 10.2 6.9 2.1 1 1 1 2 2 2 0 Lamprin ATXN-1_C PF12547.8 NODE_59331_length_280_cov_5.555102_g51391_i0forward_frame_2 - 0.32 11.4 6.6 0.15 12.4 1.3 2.2 2 0 0 2 2 2 0 Capicua transcriptional repressor modulator DUF1364 PF07102.12 NODE_59329_length_280_cov_25.106122_g51389_i0reverse_frame_3 - 0.017 15.0 0.1 0.025 14.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1364) NIR_SIR PF01077.22 NODE_59328_length_280_cov_32.534694_g51388_i0reverse_frame_3 - 0.096 12.2 0.0 0.096 12.2 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59327_length_280_cov_32.697959_g51387_i0reverse_frame_3 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59326_length_280_cov_32.697959_g51386_i0forward_frame_3 - 0.062 12.8 0.0 0.062 12.8 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59325_length_280_cov_33.485714_g51385_i0reverse_frame_3 - 0.087 12.3 0.0 0.087 12.3 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain Pex2_Pex12 PF04757.14 NODE_59318_length_280_cov_44.624490_g51378_i0forward_frame_2 - 0.027 14.1 0.2 0.028 14.0 0.2 1.1 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region Period_C PF12114.8 NODE_59316_length_280_cov_55.036735_g51376_i0forward_frame_2 - 2.9 7.4 6.9 0.1 12.1 0.7 1.7 1 1 0 2 2 2 0 Period protein 2/3C-terminal region YabA PF06156.13 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.0006 20.4 9.9 0.00085 19.9 9.9 1.3 1 0 0 1 1 1 1 Initiation control protein YabA NEMO PF11577.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.0074 16.3 17.1 0.012 15.6 17.1 1.4 1 1 0 1 1 1 1 NF-kappa-B essential modulator NEMO ADIP PF11559.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.022 14.8 16.4 0.025 14.6 16.4 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding KfrA_N PF11740.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.031 15.0 10.4 0.3 11.8 2.5 2.0 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term CALCOCO1 PF07888.11 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.031 13.2 15.4 0.034 13.0 15.4 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like DivIC PF04977.15 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.032 14.0 19.7 0.11 12.3 9.8 2.3 1 1 1 2 2 2 0 Septum formation initiator DUF2660 PF10859.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.072 13.6 3.9 0.15 12.5 3.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2660) Mei5 PF10376.9 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.073 12.9 14.4 0.12 12.2 14.4 1.3 1 0 0 1 1 1 0 Double-strand recombination repair protein HAUS-augmin3 PF14932.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.081 12.5 13.9 0.089 12.4 13.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 TMCO5 PF14992.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.093 12.3 14.5 0.1 12.2 14.5 1.0 1 0 0 1 1 1 0 TMCO5 family Spc7 PF08317.11 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.094 11.6 17.3 0.11 11.4 17.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein CENP-H PF05837.12 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.14 12.6 11.7 0.16 12.4 11.7 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Golgin_A5 PF09787.9 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.16 11.4 14.3 0.17 11.3 14.3 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF2968 PF11180.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.18 11.5 9.5 0.19 11.3 9.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) ZapB PF06005.12 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.22 12.0 22.3 0.47 10.9 22.3 1.6 1 1 0 1 1 1 0 Cell division protein ZapB FtsL PF04999.13 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.28 11.2 8.6 0.3 11.1 7.9 1.4 1 1 0 1 1 1 0 Cell division protein FtsL DUF3450 PF11932.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.32 10.3 11.3 0.34 10.2 11.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) UPF0242 PF06785.11 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.51 10.4 17.6 0.58 10.2 17.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.71 10.4 23.2 3.3 8.2 23.2 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region JIP_LZII PF16471.5 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.81 9.9 15.4 6.2 7.1 14.8 2.1 1 1 0 1 1 1 0 JNK-interacting protein leucine zipper II bZIP_1 PF00170.21 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.85 9.8 20.4 1.6 8.8 5.0 2.6 1 1 2 3 3 3 0 bZIP transcription factor DUF1664 PF07889.12 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 1.8 8.6 6.0 2.4 8.2 6.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Jnk-SapK_ap_N PF09744.9 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 1.8 8.7 20.5 1.9 8.7 19.4 1.5 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 TolA_bind_tri PF16331.5 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 2 8.6 17.0 0.62 10.2 1.0 2.1 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF1843 PF08898.10 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 2.5 8.6 9.1 22 5.6 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF1843) bZIP_2 PF07716.15 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 2.9 8.0 23.8 0.29 11.2 3.4 3.1 1 1 2 3 3 3 0 Basic region leucine zipper Exonuc_VII_L PF02601.15 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 3 7.3 9.4 3.1 7.3 9.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit UPF0449 PF15136.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 3.6 8.1 13.8 11 6.6 13.8 1.8 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 V_ATPase_I PF01496.19 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 4.9 4.9 9.2 4.9 4.9 9.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family O-antigen_lig PF13425.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 6.1 5.5 4.5 6.4 5.5 4.5 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3552 PF12072.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 6.7 6.1 19.9 8.9 5.7 19.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF4140 PF13600.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 9.2 6.8 13.2 9.2 6.8 4.1 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) TMPIT PF07851.13 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 9.3 5.4 9.0 10 5.3 9.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein PhaG_MnhG_YufB PF03334.14 NODE_59313_length_280_cov_59.093878_g51373_i0reverse_frame_2 - 0.058 13.6 0.1 0.083 13.1 0.1 1.2 1 0 0 1 1 1 0 Na+/H+ antiporter subunit TssO PF17561.2 NODE_59313_length_280_cov_59.093878_g51373_i0reverse_frame_2 - 2.3 8.3 7.6 3.4 7.8 7.6 1.3 1 0 0 1 1 1 0 Type VI secretion system, TssO DUF383 PF04063.14 NODE_59312_length_280_cov_60.093878_g51372_i0reverse_frame_3 - 0.017 14.8 0.4 0.018 14.7 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF383) hGDE_N PF14699.6 NODE_59311_length_280_cov_60.836735_g51371_i0reverse_frame_3 - 0.12 12.6 1.4 0.17 12.0 1.4 1.5 1 1 0 1 1 1 0 N-terminal domain from the human glycogen debranching enzyme DUF4513 PF14983.6 NODE_59310_length_280_cov_60.840816_g51370_i0reverse_frame_3 - 0.092 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4513) RasGEF_N PF00618.20 NODE_59310_length_280_cov_60.840816_g51370_i0reverse_frame_2 - 0.11 12.8 0.1 0.15 12.3 0.1 1.2 1 0 0 1 1 1 0 RasGEF N-terminal motif Rrn6 PF10214.9 NODE_59310_length_280_cov_60.840816_g51370_i0forward_frame_3 - 0.22 10.0 2.1 0.24 9.9 2.1 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Trehalose_PPase PF02358.16 NODE_59309_length_280_cov_63.081633_g51369_i0reverse_frame_2 - 7.4e-08 31.8 0.3 9.3e-08 31.5 0.3 1.0 1 0 0 1 1 1 1 Trehalose-phosphatase DUF3113 PF11310.8 NODE_59309_length_280_cov_63.081633_g51369_i0reverse_frame_2 - 0.047 13.6 0.1 0.069 13.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3113) Thioredoxin_5 PF13743.6 NODE_59307_length_280_cov_67.032653_g51367_i0forward_frame_2 - 0.043 13.5 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin PUF PF00806.19 NODE_59307_length_280_cov_67.032653_g51367_i0forward_frame_2 - 0.19 11.5 0.6 0.35 10.7 0.0 1.9 2 0 0 2 2 2 0 Pumilio-family RNA binding repeat DUF4575 PF15143.6 NODE_59306_length_280_cov_68.261224_g51366_i0reverse_frame_2 - 0.063 13.5 2.5 0.072 13.3 2.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4575) Dynein_AAA_lid PF17852.1 NODE_59304_length_280_cov_68.612245_g51364_i0forward_frame_2 - 5.5e-09 36.2 0.1 7.2e-09 35.8 0.1 1.2 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain DUF4758 PF15950.5 NODE_59303_length_280_cov_68.742857_g51363_i0reverse_frame_2 - 0.064 13.6 0.1 0.072 13.4 0.1 1.1 1 0 0 1 1 1 0 Putative sperm flagellar membrane protein Pkinase PF00069.25 NODE_59303_length_280_cov_68.742857_g51363_i0forward_frame_3 - 3.6e-13 49.5 0.0 3.9e-13 49.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_59303_length_280_cov_68.742857_g51363_i0forward_frame_3 - 4.3e-06 26.2 0.0 5.1e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase MTTB PF06253.11 NODE_59300_length_280_cov_71.436735_g51360_i0reverse_frame_3 - 0.097 10.6 0.1 0.11 10.5 0.1 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) Fer2_3 PF13085.6 NODE_59296_length_280_cov_78.432653_g51356_i0reverse_frame_2 - 0.11 12.5 0.8 0.12 12.4 0.8 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Corona_S2 PF01601.16 NODE_59296_length_280_cov_78.432653_g51356_i0reverse_frame_2 - 2.3 6.6 5.5 2.5 6.5 5.5 1.0 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein LcrR PF09621.10 NODE_59296_length_280_cov_78.432653_g51356_i0forward_frame_2 - 0.008 15.6 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Type III secretion system regulator (LcrR) TspO_MBR PF03073.15 NODE_59294_length_280_cov_83.036735_g51354_i0forward_frame_3 - 2.3 8.3 11.0 3.6 7.7 10.3 1.6 1 1 0 1 1 1 0 TspO/MBR family DUF1854 PF08909.11 NODE_59289_length_280_cov_106.742857_g51349_i0forward_frame_3 - 0.037 13.8 0.2 0.041 13.7 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1854) ORC6 PF05460.13 NODE_59286_length_280_cov_128.971429_g51346_i0reverse_frame_2 - 0.13 11.5 0.1 0.13 11.5 0.1 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Hydrophob_seed PF14547.6 NODE_59285_length_280_cov_150.338776_g51345_i0forward_frame_3 - 0.027 14.7 0.1 0.043 14.0 0.1 1.3 1 0 0 1 1 1 0 Hydrophobic seed protein DUF2085 PF09858.9 NODE_59281_length_280_cov_177.538776_g51341_i0forward_frame_2 - 0.084 13.4 0.0 0.091 13.2 0.0 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2085) DUF624 PF04854.14 NODE_59278_length_280_cov_266.428571_g51338_i0reverse_frame_2 - 0.0087 16.1 0.1 0.013 15.6 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF624 TMEM239 PF15841.5 NODE_59278_length_280_cov_266.428571_g51338_i0forward_frame_3 - 0.31 11.0 4.4 0.36 10.7 4.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family CDC24_OB3 PF17244.2 NODE_59274_length_281_cov_1.036585_g51334_i0forward_frame_2 - 0.1 12.3 0.1 0.1 12.3 0.1 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Vps23_core PF09454.10 NODE_59269_length_281_cov_1.276423_g51329_i0reverse_frame_2 - 0.024 14.6 0.0 0.034 14.1 0.0 1.2 1 0 0 1 1 1 0 Vps23 core domain PD-C2-AF1 PF09310.10 NODE_59265_length_281_cov_1.321138_g51325_i0forward_frame_2 - 0.11 11.9 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 FWWh PF14922.6 NODE_59263_length_281_cov_1.341463_g51323_i0reverse_frame_2 - 0.0033 17.4 0.6 0.0041 17.1 0.3 1.3 1 1 0 1 1 1 1 Protein of unknown function Pox_A21 PF05323.12 NODE_59263_length_281_cov_1.341463_g51323_i0forward_frame_2 - 0.011 16.3 3.9 0.011 16.3 3.9 1.6 1 1 1 2 2 2 0 Poxvirus A21 Protein PIG-P PF08510.12 NODE_59263_length_281_cov_1.341463_g51323_i0forward_frame_2 - 0.077 12.9 0.6 0.1 12.5 0.6 1.2 1 0 0 1 1 1 0 PIG-P AIG1 PF04548.16 NODE_59261_length_281_cov_1.373984_g51321_i0forward_frame_3 - 0.05 12.9 2.7 0.055 12.8 2.7 1.0 1 0 0 1 1 1 0 AIG1 family Mad3_BUB1_I PF08311.12 NODE_59257_length_281_cov_1.443089_g51317_i0reverse_frame_3 - 0.0079 16.2 0.8 0.0092 16.0 0.8 1.1 1 0 0 1 1 1 1 Mad3/BUB1 homology region 1 DUF2778 PF10908.8 NODE_59246_length_281_cov_1.707317_g51306_i0forward_frame_3 - 0.029 14.7 0.3 0.031 14.5 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2778) DASH_Spc34 PF08657.10 NODE_59245_length_281_cov_1.723577_g51305_i0reverse_frame_2 - 0.036 13.9 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 cNMP_binding PF00027.29 NODE_59245_length_281_cov_1.723577_g51305_i0forward_frame_3 - 7.7e-19 67.6 0.0 8.6e-19 67.4 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain AAT PF03417.16 NODE_59243_length_281_cov_1.756098_g51303_i0reverse_frame_2 - 0.024 14.4 0.0 0.025 14.3 0.0 1.0 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Mu-transpos_C PF09299.11 NODE_59243_length_281_cov_1.756098_g51303_i0reverse_frame_2 - 0.061 13.3 0.0 0.097 12.6 0.0 1.3 1 0 0 1 1 1 0 Mu transposase, C-terminal Vasculin PF15337.6 NODE_59243_length_281_cov_1.756098_g51303_i0reverse_frame_2 - 0.11 13.4 0.2 0.13 13.1 0.2 1.2 1 0 0 1 1 1 0 Vascular protein family Vasculin-like 1 Reprolysin_2 PF13574.6 NODE_59242_length_281_cov_1.768293_g51302_i0forward_frame_3 - 0.023 14.6 2.6 0.023 14.6 2.1 1.2 1 1 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like V_ATPase_I PF01496.19 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.13 10.2 8.3 0.14 10.1 8.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cnn_1N PF07989.11 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.23 11.6 14.4 0.045 13.9 7.6 2.3 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF724 PF05266.14 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.46 10.3 9.4 0.53 10.1 9.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) AKNA PF12443.8 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 1 10.1 6.6 0.81 10.4 2.5 2.1 1 1 1 2 2 2 0 AT-hook-containing transcription factor LMBR1 PF04791.16 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 1.5 7.7 4.9 1.7 7.5 4.9 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Atg14 PF10186.9 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 3.4 6.7 10.2 3.9 6.5 10.2 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMPIT PF07851.13 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 4.1 6.6 9.0 4.8 6.3 9.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4404 PF14357.6 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 4.5 8.0 11.0 2.9 8.6 4.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) GrpE PF01025.19 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 8.8 6.0 14.1 50 3.5 14.1 1.9 1 1 0 1 1 1 0 GrpE G-gamma PF00631.22 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 9.8 6.3 9.2 19 5.4 0.8 3.0 1 1 2 3 3 3 0 GGL domain Flg_bb_rod PF00460.20 NODE_59239_length_281_cov_1.808943_g51299_i0forward_frame_2 - 3.2e-12 46.1 0.2 5.7e-12 45.3 0.2 1.3 1 0 0 1 1 1 1 Flagella basal body rod protein Sid-5 PF17204.3 NODE_59235_length_281_cov_1.910569_g51295_i0reverse_frame_3 - 0.063 13.5 0.0 0.097 12.8 0.0 1.3 1 0 0 1 1 1 0 Sid-5 family Acyl_transf_3 PF01757.22 NODE_59230_length_281_cov_1.971545_g51290_i0reverse_frame_3 - 7e-08 31.9 8.1 8.5e-08 31.6 8.1 1.2 1 0 0 1 1 1 1 Acyltransferase family O_anti_polymase PF01901.16 NODE_59230_length_281_cov_1.971545_g51290_i0reverse_frame_3 - 0.0045 16.3 6.2 0.0053 16.1 6.2 1.2 1 0 0 1 1 1 1 Putative O-antigen polymerase FUSC_2 PF13515.6 NODE_59230_length_281_cov_1.971545_g51290_i0reverse_frame_3 - 0.13 12.4 3.1 0.14 12.2 3.1 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein-like GRASP55_65 PF04495.14 NODE_59225_length_281_cov_2.028455_g51285_i0forward_frame_3 - 1.9e-09 37.9 0.0 2e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain PDZ_6 PF17820.1 NODE_59225_length_281_cov_2.028455_g51285_i0forward_frame_3 - 9.6e-05 22.1 0.0 0.00013 21.7 0.0 1.2 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 NODE_59225_length_281_cov_2.028455_g51285_i0forward_frame_3 - 0.0097 16.2 0.0 0.012 15.9 0.0 1.2 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 NODE_59225_length_281_cov_2.028455_g51285_i0forward_frame_3 - 0.033 14.5 0.0 0.042 14.2 0.0 1.2 1 0 0 1 1 1 0 PDZ domain Mtf2_C PF14061.6 NODE_59224_length_281_cov_2.182927_g51284_i0forward_frame_3 - 0.12 12.6 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 Furin-like_2 PF15913.5 NODE_59222_length_281_cov_2.231707_g51282_i0forward_frame_3 - 0.0023 18.1 1.7 0.0025 17.9 1.7 1.1 1 0 0 1 1 1 1 Furin-like repeat, cysteine-rich zf-C2H2_6 PF13912.6 NODE_59222_length_281_cov_2.231707_g51282_i0forward_frame_3 - 2.9 8.0 6.3 6.3 6.9 0.8 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Cnn_1N PF07989.11 NODE_59219_length_281_cov_2.325203_g51279_i0reverse_frame_3 - 0.12 12.5 0.1 0.25 11.5 0.0 1.5 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 Fn3-like PF14310.6 NODE_59212_length_281_cov_2.634146_g51272_i0reverse_frame_2 - 0.06 13.5 0.0 0.11 12.6 0.0 1.4 1 1 0 1 1 1 0 Fibronectin type III-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks256.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks256.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks256.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks256.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RBB1NT PF08169.11 NODE_59204_length_281_cov_3.036585_g51264_i0forward_frame_3 - 0.033 14.3 0.0 0.041 14.0 0.0 1.1 1 0 0 1 1 1 0 RBB1NT (NUC162) domain DUF2635 PF10948.8 NODE_59191_length_281_cov_5.081301_g51251_i0reverse_frame_2 - 0.099 12.4 0.1 0.21 11.3 0.2 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2635) Aminotran_1_2 PF00155.21 NODE_59190_length_281_cov_5.345528_g51250_i0reverse_frame_2 - 7.7e-25 87.8 0.0 8e-25 87.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aconitase_C PF00694.19 NODE_59190_length_281_cov_5.345528_g51250_i0reverse_frame_2 - 0.21 11.9 0.0 0.23 11.8 0.0 1.1 1 0 0 1 1 1 0 Aconitase C-terminal domain DUF4716 PF15837.5 NODE_59187_length_281_cov_38.304878_g51247_i0forward_frame_2 - 0.14 12.2 4.1 0.24 11.5 4.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4716) DUF3725 PF12523.8 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_3 - 0.0055 17.0 0.7 0.11 12.8 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3725) DNA_RNApol_7kD PF03604.13 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_3 - 0.011 15.4 0.2 0.022 14.5 0.2 1.4 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf-AD PF07776.15 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_3 - 0.028 14.6 0.1 0.028 14.6 0.1 1.8 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) zf-HYPF PF07503.12 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_3 - 0.17 11.7 0.2 0.17 11.7 0.2 2.6 3 0 0 3 3 3 0 HypF finger Nairovirus_M PF07948.11 NODE_59178_length_281_cov_67.601626_g51238_i0forward_frame_3 - 0.0065 14.8 0.2 0.0075 14.5 0.2 1.0 1 0 0 1 1 1 1 Nairovirus M polyprotein-like Rhomboid_SP PF12595.8 NODE_59173_length_281_cov_76.524390_g51233_i0forward_frame_2 - 0.073 12.4 1.2 0.081 12.3 1.2 1.3 1 1 0 1 1 1 0 Rhomboid serine protease Ribosomal_S18 PF01084.20 NODE_59169_length_281_cov_81.024390_g51229_i0forward_frame_3 - 0.051 13.8 0.2 0.078 13.2 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein S18 TPT PF03151.16 NODE_59168_length_281_cov_83.666667_g51228_i0forward_frame_3 - 0.099 12.0 0.1 0.22 10.8 0.1 1.5 1 1 1 2 2 2 0 Triose-phosphate Transporter family VAD1-2 PF15310.6 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_2 - 0.014 15.3 1.3 0.016 15.1 1.3 1.1 1 0 0 1 1 1 0 Vitamin A-deficiency (VAD) rat model signalling DUF2207 PF09972.9 NODE_59165_length_281_cov_111.203252_g51225_i0reverse_frame_3 - 3 6.5 12.8 3.5 6.3 12.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Casc1 PF12366.8 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_2 - 1.7 8.1 10.6 0.94 9.0 8.9 1.4 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 Metallothio_11 PF02066.15 NODE_59162_length_281_cov_119.239837_g51222_i0reverse_frame_3 - 0.032 14.4 0.4 0.039 14.1 0.4 1.2 1 0 0 1 1 1 0 Metallothionein family 11 DUF2065 PF09838.9 NODE_59161_length_281_cov_122.817073_g51221_i0forward_frame_2 - 0.096 12.7 1.4 1.5 8.9 0.2 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) PGA_cap PF09587.10 NODE_59160_length_281_cov_124.715447_g51220_i0reverse_frame_2 - 0.044 13.2 0.0 0.045 13.2 0.0 1.0 1 0 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap Inhibitor_I71 PF12628.7 NODE_59155_length_281_cov_148.743902_g51215_i0forward_frame_2 - 0.083 12.7 0.0 0.098 12.5 0.0 1.1 1 0 0 1 1 1 0 Falstatin, cysteine peptidase inhibitor CCB1 PF12046.8 NODE_59152_length_281_cov_184.776423_g51212_i0forward_frame_3 - 0.049 13.0 3.9 0.06 12.7 3.9 1.1 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B EbsA PF17255.2 NODE_59152_length_281_cov_184.776423_g51212_i0forward_frame_3 - 1.5 9.2 4.5 1.7 9.0 4.5 1.1 1 0 0 1 1 1 0 EbsA-like protein TarH PF02203.15 NODE_59152_length_281_cov_184.776423_g51212_i0forward_frame_3 - 4.1 7.3 4.7 5.4 6.9 4.7 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue DUF5542 PF17696.1 NODE_59150_length_281_cov_199.792683_g51210_i0forward_frame_3 - 0.42 10.8 1.7 1.4 9.1 0.2 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5542) zinc_ribbon_9 PF14369.6 NODE_59148_length_281_cov_230.821138_g51208_i0forward_frame_3 - 0.081 13.2 1.2 0.13 12.5 0.2 1.8 2 0 0 2 2 2 0 zinc-ribbon DUF35_N PF12172.8 NODE_59147_length_281_cov_323.036585_g51207_i0forward_frame_2 - 8.2e-05 22.4 0.8 0.00013 21.7 0.8 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF1478 PF07349.11 NODE_59146_length_281_cov_363.784553_g51206_i0reverse_frame_3 - 0.046 13.6 0.0 0.057 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1478) SelR PF01641.18 NODE_59142_length_282_cov_0.955466_g51202_i0reverse_frame_2 - 0.022 14.8 0.0 0.029 14.4 0.0 1.2 1 0 0 1 1 1 0 SelR domain DUF3973 PF13119.6 NODE_59141_length_282_cov_0.955466_g51201_i0reverse_frame_3 - 0.031 14.3 0.1 0.068 13.3 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) DUF1090 PF06476.12 NODE_59140_length_282_cov_0.967611_g51200_i0forward_frame_2 - 0.66 10.1 19.8 0.35 11.0 6.1 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF1090) DUF2203 PF09969.9 NODE_59140_length_282_cov_0.967611_g51200_i0forward_frame_2 - 8.5 7.1 9.6 11 6.7 9.6 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF1356 PF07092.12 NODE_59139_length_282_cov_0.967611_g51199_i0forward_frame_2 - 0.028 13.7 0.3 0.031 13.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) DUF4253 PF14062.6 NODE_59137_length_282_cov_1.076923_g51197_i0forward_frame_3 - 0.014 15.6 0.4 0.016 15.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) DUF4258 PF14076.6 NODE_59137_length_282_cov_1.076923_g51197_i0forward_frame_3 - 0.046 14.1 0.0 0.082 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4258) Remorin_C PF03763.13 NODE_59131_length_282_cov_1.259109_g51191_i0reverse_frame_2 - 0.013 15.3 4.1 0.015 15.2 4.1 1.2 1 1 0 1 1 1 0 Remorin, C-terminal region DUF2341 PF10102.9 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_2 - 0.056 14.0 0.0 0.074 13.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2341) LolA_like PF17131.4 NODE_59127_length_282_cov_1.299595_g51187_i0reverse_frame_3 - 0.0035 17.1 1.3 0.0041 16.9 1.3 1.1 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein Pkinase PF00069.25 NODE_59126_length_282_cov_1.331984_g51186_i0reverse_frame_2 - 0.00012 21.5 0.0 0.00017 21.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain HTH_52 PF18576.1 NODE_59126_length_282_cov_1.331984_g51186_i0forward_frame_3 - 0.11 12.8 0.1 7.7 6.8 0.0 2.1 1 1 1 2 2 2 0 Helix-turn-helix domain Avl9 PF09794.9 NODE_59122_length_282_cov_1.457490_g51182_i0reverse_frame_3 - 0.0077 15.0 0.8 0.07 11.8 0.6 1.9 1 1 1 2 2 2 2 Transport protein Avl9 DUF5345 PF17280.2 NODE_59117_length_282_cov_1.582996_g51177_i0forward_frame_2 - 0.047 13.7 1.2 0.071 13.1 1.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5345) Ion_trans PF00520.31 NODE_59116_length_282_cov_1.607287_g51176_i0reverse_frame_2 - 2.1e-07 30.5 4.4 2.3e-07 30.3 4.4 1.0 1 0 0 1 1 1 1 Ion transport protein TetR PF13972.6 NODE_59113_length_282_cov_1.655870_g51173_i0forward_frame_3 - 0.041 13.6 0.0 0.047 13.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial transcriptional repressor DNA_gyraseA_C PF03989.13 NODE_59105_length_282_cov_1.769231_g51165_i0reverse_frame_3 - 3.4e-14 52.0 0.0 1.3e-09 37.4 0.0 2.1 2 0 0 2 2 2 2 DNA gyrase C-terminal domain, beta-propeller Calycin_like PF13944.6 NODE_59101_length_282_cov_1.805668_g51161_i0reverse_frame_3 - 0.0047 17.2 0.4 0.0057 17.0 0.4 1.2 1 0 0 1 1 1 1 Calycin-like beta-barrel domain Dehydratase_MU PF02288.15 NODE_59095_length_282_cov_1.971660_g51155_i0forward_frame_3 - 0.069 13.0 0.0 0.077 12.9 0.0 1.1 1 0 0 1 1 1 0 Dehydratase medium subunit DHHC PF01529.20 NODE_59094_length_282_cov_1.983806_g51154_i0forward_frame_3 - 7.8e-24 84.3 5.9 9.1e-24 84.1 5.9 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase PMBR PF09373.10 NODE_59090_length_282_cov_2.109312_g51150_i0reverse_frame_2 - 0.37 11.0 2.7 3.1 8.1 0.3 2.8 2 1 1 3 3 3 0 Pseudomurein-binding repeat zf-TFIIIC PF12660.7 NODE_59085_length_282_cov_2.267206_g51145_i0forward_frame_2 - 0.083 12.8 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex CCER1 PF15482.6 NODE_59082_length_282_cov_2.291498_g51142_i0reverse_frame_2 - 0.1 12.5 0.0 0.1 12.5 0.0 1.4 2 0 0 2 2 2 0 Coiled-coil domain-containing glutamate-rich protein family 1 CBM_5_12 PF02839.14 NODE_59081_length_282_cov_2.303644_g51141_i0forward_frame_2 - 0.045 14.4 1.0 1.1 10.0 0.1 2.7 2 0 0 2 2 2 0 Carbohydrate binding domain Suppressor_P21 PF11479.8 NODE_59080_length_282_cov_2.303644_g51140_i0reverse_frame_3 - 0.1 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 RNA silencing suppressor P21 C-terminal domain zf-C2H2_3rep PF18868.1 NODE_59080_length_282_cov_2.303644_g51140_i0forward_frame_3 - 0.13 13.0 0.0 0.14 12.8 0.0 1.1 1 0 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats DUF2512 PF10710.9 NODE_59078_length_282_cov_2.340081_g51138_i0reverse_frame_3 - 0.0087 15.7 0.1 0.0098 15.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2512) APC1_C PF18122.1 NODE_59078_length_282_cov_2.340081_g51138_i0reverse_frame_2 - 0.19 11.7 1.5 0.23 11.4 1.5 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex sub unit 1 C-terminal domain Pkinase PF00069.25 NODE_59078_length_282_cov_2.340081_g51138_i0forward_frame_2 - 1.6e-14 53.9 0.0 1.7e-14 53.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_59078_length_282_cov_2.340081_g51138_i0forward_frame_2 - 1.3e-08 34.5 0.0 1.5e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase HMw1_D2 PF18254.1 NODE_59077_length_282_cov_2.368421_g51137_i0reverse_frame_2 - 0.033 14.5 0.7 0.042 14.2 0.1 1.7 2 1 0 2 2 2 0 HMW1 domain 2 TTR-52 PF01060.23 NODE_59076_length_282_cov_2.372470_g51136_i0forward_frame_3 - 0.012 16.3 0.2 0.024 15.3 0.2 1.6 1 1 0 1 1 1 0 Transthyretin-like family TPR_20 PF14561.6 NODE_59071_length_282_cov_2.542510_g51131_i0forward_frame_3 - 0.036 14.4 0.3 0.065 13.6 0.2 1.5 1 1 0 1 1 1 0 Tetratricopeptide repeat Lar_N PF09861.9 NODE_59071_length_282_cov_2.542510_g51131_i0forward_frame_3 - 0.039 13.1 0.7 0.045 12.9 0.7 1.1 1 0 0 1 1 1 0 Lactate racemase N-terminal domain Dfp1_Him1_M PF08630.10 NODE_59071_length_282_cov_2.542510_g51131_i0forward_frame_3 - 0.046 13.9 2.4 0.068 13.4 0.7 1.8 1 1 1 2 2 2 0 Dfp1/Him1, central region OSTMP1 PF09777.9 NODE_59070_length_282_cov_2.550607_g51130_i0reverse_frame_2 - 0.00098 18.6 0.8 0.0013 18.2 0.8 1.2 1 1 0 1 1 1 1 Osteopetrosis-associated transmembrane protein 1 precursor Lenti_VIF_2 PF07401.12 NODE_59070_length_282_cov_2.550607_g51130_i0reverse_frame_2 - 0.0078 15.6 0.1 0.0082 15.5 0.1 1.1 1 0 0 1 1 1 1 Bovine Lentivirus VIF protein CathepsinC_exc PF08773.11 NODE_59064_length_282_cov_2.708502_g51124_i0reverse_frame_2 - 0.14 12.5 0.1 0.15 12.4 0.1 1.1 1 0 0 1 1 1 0 Cathepsin C exclusion domain Surp PF01805.20 NODE_59060_length_282_cov_2.991903_g51120_i0reverse_frame_2 - 5.2e-10 39.2 0.3 1.1e-09 38.2 0.3 1.5 1 0 0 1 1 1 1 Surp module SPC25 PF06703.11 NODE_59059_length_282_cov_3.056680_g51119_i0reverse_frame_3 - 0.79 9.5 7.6 0.86 9.4 7.6 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) PHTB1_C PF14728.6 NODE_59059_length_282_cov_3.056680_g51119_i0forward_frame_3 - 0.0024 17.0 0.7 0.0025 17.0 0.7 1.0 1 0 0 1 1 1 1 PTHB1 C-terminus Aldedh PF00171.22 NODE_59058_length_282_cov_3.064777_g51118_i0reverse_frame_3 - 3.4e-09 35.7 0.2 4e-09 35.5 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ALF PF03752.13 NODE_59058_length_282_cov_3.064777_g51118_i0reverse_frame_3 - 0.063 13.3 0.3 1.4 8.9 0.0 2.4 2 0 0 2 2 2 0 Short repeats of unknown function SPDY PF03771.16 NODE_59057_length_282_cov_3.105263_g51117_i0forward_frame_3 - 0.085 12.8 0.2 0.26 11.2 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF317) SPOR PF05036.13 NODE_59057_length_282_cov_3.105263_g51117_i0forward_frame_3 - 2.6 8.5 4.3 45 4.5 0.1 3.0 1 1 2 3 3 3 0 Sporulation related domain PHR PF08005.12 NODE_59056_length_282_cov_3.121457_g51116_i0forward_frame_3 - 8.8e-06 26.5 0.8 1.2e-05 26.0 0.8 1.2 1 0 0 1 1 1 1 PHR domain LapA_dom PF06305.11 NODE_59055_length_282_cov_3.145749_g51115_i0forward_frame_3 - 0.052 13.4 0.1 0.073 12.9 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain CLZ PF16526.5 NODE_59055_length_282_cov_3.145749_g51115_i0forward_frame_3 - 0.056 13.8 0.1 0.096 13.1 0.1 1.4 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DHHC PF01529.20 NODE_59055_length_282_cov_3.145749_g51115_i0forward_frame_3 - 0.067 13.3 0.7 0.083 13.0 0.4 1.3 1 1 0 1 1 1 0 DHHC palmitoyltransferase SipA_VBS PF17985.1 NODE_59055_length_282_cov_3.145749_g51115_i0forward_frame_3 - 0.074 13.0 0.9 0.16 11.9 0.9 1.5 1 0 0 1 1 1 0 SipA vinculin binding site HTH_3 PF01381.22 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 3.6e-15 55.8 0.4 4.4e-15 55.5 0.4 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 3.1e-11 43.4 0.0 4.3e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 2.2e-08 34.0 0.0 2.7e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 6.5e-05 22.8 0.5 0.00013 21.9 0.5 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.00035 20.7 0.0 0.00046 20.3 0.0 1.1 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_26 PF13443.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.00037 20.9 0.0 0.00052 20.4 0.0 1.2 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.0017 18.2 0.1 0.0022 17.8 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Histone_HNS PF00816.21 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.042 14.7 0.0 0.067 14.0 0.0 1.5 1 1 0 1 1 1 0 H-NS histone family HTH_24 PF13412.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.069 12.7 0.4 0.15 11.6 0.4 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding XK-related PF09815.9 NODE_59046_length_282_cov_7.311741_g51106_i0forward_frame_2 - 0.028 13.5 0.5 0.029 13.4 0.5 1.0 1 0 0 1 1 1 0 XK-related protein D_CNTX PF17492.2 NODE_59043_length_282_cov_13.854251_g51103_i0forward_frame_3 - 0.67 10.2 12.9 0.77 10.0 7.0 2.3 2 0 0 2 2 2 0 Delta Ctenitoxins FERM_F2 PF18377.1 NODE_59035_length_282_cov_54.400810_g51095_i0reverse_frame_2 - 0.049 13.6 0.0 0.066 13.2 0.0 1.2 1 0 0 1 1 1 0 FERM F2 acyl-CoA binding protein-like domain ATP-synt_C PF00137.21 NODE_59033_length_282_cov_56.214575_g51093_i0forward_frame_2 - 0.021 15.1 1.3 0.052 13.9 1.2 1.9 1 1 1 2 2 2 0 ATP synthase subunit C DUF5447 PF17525.2 NODE_59032_length_282_cov_57.433198_g51092_i0reverse_frame_2 - 0.16 12.4 5.0 0.21 12.1 5.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5447) Histone_H2A_C PF16211.5 NODE_59031_length_282_cov_58.979757_g51091_i0forward_frame_2 - 0.2 11.4 2.0 0.42 10.4 2.0 1.5 1 0 0 1 1 1 0 C-terminus of histone H2A IDO PF01231.18 NODE_59030_length_282_cov_61.668016_g51090_i0reverse_frame_2 - 0.00016 20.6 0.0 0.00018 20.5 0.0 1.1 1 0 0 1 1 1 1 Indoleamine 2,3-dioxygenase DUF2684 PF10885.8 NODE_59029_length_282_cov_62.004049_g51089_i0reverse_frame_3 - 7.8 6.7 8.8 8.3 6.6 8.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2684) G10 PF01125.17 NODE_59029_length_282_cov_62.004049_g51089_i0forward_frame_2 - 0.0014 18.4 0.2 0.0024 17.7 0.0 1.5 1 1 0 1 1 1 1 G10 protein Mt_ATP-synt_B PF05405.14 NODE_59028_length_282_cov_64.125506_g51088_i0reverse_frame_3 - 0.72 9.5 2.9 1 9.0 2.9 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) SWIRM-assoc_1 PF16495.5 NODE_59028_length_282_cov_64.125506_g51088_i0forward_frame_2 - 3.4e-09 36.5 1.6 3.4e-09 36.5 1.6 1.4 2 0 0 2 2 2 1 SWIRM-associated region 1 FliJ PF02050.16 NODE_59028_length_282_cov_64.125506_g51088_i0forward_frame_2 - 0.023 14.9 5.3 0.031 14.5 5.3 1.2 1 0 0 1 1 1 0 Flagellar FliJ protein DUF16 PF01519.16 NODE_59028_length_282_cov_64.125506_g51088_i0forward_frame_2 - 1.7 9.1 10.1 0.25 11.8 3.5 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF2459 PF09601.10 NODE_59027_length_282_cov_64.493927_g51087_i0forward_frame_2 - 0.05 13.4 0.5 0.067 13.0 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2459) MDM10 PF12519.8 NODE_59026_length_282_cov_65.497976_g51086_i0forward_frame_2 - 0.092 11.6 0.4 0.11 11.3 0.4 1.1 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 CNOT1_TTP_bind PF16417.5 NODE_59025_length_282_cov_65.955466_g51085_i0reverse_frame_2 - 0.01 15.0 0.0 0.011 14.9 0.0 1.0 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Baculo_VP1054 PF05789.11 NODE_59025_length_282_cov_65.955466_g51085_i0forward_frame_2 - 0.00067 19.0 0.0 0.00073 18.9 0.0 1.0 1 0 0 1 1 1 1 Baculovirus VP1054 protein UPF0547 PF10571.9 NODE_59024_length_282_cov_69.020243_g51084_i0reverse_frame_3 - 0.077 13.1 2.1 2.9 8.0 0.5 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Latarcin PF10279.9 NODE_59021_length_282_cov_75.502024_g51081_i0reverse_frame_3 - 0.095 13.1 0.1 0.099 13.1 0.1 1.2 1 0 0 1 1 1 0 Latarcin precursor UBA PF00627.31 NODE_59017_length_282_cov_81.550607_g51077_i0forward_frame_2 - 6.9e-09 35.4 0.0 1.2e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 UBA/TS-N domain HSM3_C PF18794.1 NODE_59017_length_282_cov_81.550607_g51077_i0forward_frame_2 - 0.05 13.2 0.0 0.059 12.9 0.0 1.0 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain zf-RING_2 PF13639.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 8.9e-14 51.6 5.8 1.2e-13 51.2 5.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 5.5e-10 38.8 5.7 9.4e-10 38.1 3.8 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 1e-08 35.0 1.6 1.1e-08 34.9 0.8 1.4 1 1 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 1.5e-08 34.8 8.4 1.4e-07 31.7 8.4 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 1.9e-08 34.0 6.1 3.4e-08 33.2 6.1 1.4 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 1.2e-07 31.6 4.1 1.5e-07 31.2 4.1 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 1.3e-07 31.3 5.6 2e-07 30.8 5.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 3.3e-07 30.0 3.3 4.6e-07 29.6 3.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 2.8e-05 24.2 4.1 4.6e-05 23.5 4.1 1.3 1 0 0 1 1 1 1 RING-variant domain Prok-RING_4 PF14447.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.00012 21.9 6.7 0.002 17.9 7.5 2.0 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-UDP PF14569.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.00012 22.1 0.6 0.00016 21.7 0.6 1.2 1 0 0 1 1 1 1 Zinc-binding RING-finger FANCL_C PF11793.8 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.00017 21.7 5.3 0.0043 17.2 5.3 2.2 1 1 0 1 1 1 1 FANCL C-terminal domain zf-ANAPC11 PF12861.7 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.00021 21.3 3.5 0.00037 20.5 3.5 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.0003 20.3 4.8 0.00078 19.0 4.7 1.7 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type Baculo_RING PF05883.11 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.0016 18.4 0.9 0.0021 18.1 0.9 1.2 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4_4 PF15227.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.074 13.2 4.7 1.1 9.5 4.7 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-P11 PF03854.14 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.14 11.8 4.3 0.22 11.2 1.1 2.0 2 0 0 2 2 2 0 P-11 zinc finger zf-C3H2C3 PF17122.5 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 7.1 6.8 9.5 0.33 11.0 3.3 2.0 2 1 0 2 2 2 0 Zinc-finger OTU PF02338.19 NODE_59014_length_282_cov_103.028340_g51074_i0forward_frame_2 - 0.15 12.6 0.0 0.19 12.2 0.0 1.1 1 0 0 1 1 1 0 OTU-like cysteine protease Nudix_N_2 PF14803.6 NODE_59012_length_282_cov_107.068826_g51072_i0forward_frame_2 - 0.0081 16.1 0.7 0.014 15.3 0.2 1.7 2 0 0 2 2 2 1 Nudix N-terminal Jacalin PF01419.17 NODE_59010_length_282_cov_109.356275_g51070_i0reverse_frame_3 - 8.7e-07 28.9 0.1 1.2e-06 28.5 0.1 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain ABC2_membrane_2 PF12679.7 NODE_59010_length_282_cov_109.356275_g51070_i0forward_frame_3 - 0.21 10.8 0.7 0.21 10.8 0.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein AP3D1 PF06375.11 NODE_59008_length_282_cov_119.449393_g51068_i0reverse_frame_3 - 1.9 8.7 13.8 2.8 8.2 13.8 1.3 1 1 0 1 1 1 0 AP-3 complex subunit delta-1 Mu-conotoxin PF05374.12 NODE_59007_length_282_cov_119.716599_g51067_i0forward_frame_3 - 0.06 13.4 1.0 0.14 12.2 1.0 1.6 1 0 0 1 1 1 0 Mu-Conotoxin Colicin_im PF03857.13 NODE_59006_length_282_cov_122.295547_g51066_i0reverse_frame_3 - 0.049 13.6 0.3 0.068 13.1 0.3 1.2 1 0 0 1 1 1 0 Colicin immunity protein YabA PF06156.13 NODE_59003_length_282_cov_162.914980_g51063_i0forward_frame_3 - 0.015 15.9 0.1 0.017 15.7 0.1 1.1 1 0 0 1 1 1 0 Initiation control protein YabA TSC22 PF01166.18 NODE_59003_length_282_cov_162.914980_g51063_i0forward_frame_3 - 0.026 14.8 0.5 0.036 14.4 0.5 1.3 1 0 0 1 1 1 0 TSC-22/dip/bun family ZapB PF06005.12 NODE_59003_length_282_cov_162.914980_g51063_i0forward_frame_3 - 0.052 14.0 0.2 0.077 13.4 0.2 1.2 1 0 0 1 1 1 0 Cell division protein ZapB bZIP_1 PF00170.21 NODE_59003_length_282_cov_162.914980_g51063_i0forward_frame_3 - 0.091 12.9 0.2 0.15 12.1 0.2 1.3 1 0 0 1 1 1 0 bZIP transcription factor HOOK PF05622.12 NODE_59003_length_282_cov_162.914980_g51063_i0forward_frame_3 - 0.098 10.8 0.2 0.1 10.8 0.2 1.0 1 0 0 1 1 1 0 HOOK protein HMG_box PF00505.19 NODE_58993_length_282_cov_6839.570850_g51054_i0forward_frame_3 - 2.2e-15 56.8 1.9 2.8e-15 56.5 1.9 1.1 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_58993_length_282_cov_6839.570850_g51054_i0forward_frame_3 - 1.5e-08 35.1 1.2 1.9e-08 34.8 1.2 1.1 1 0 0 1 1 1 1 HMG-box domain ASXH PF13919.6 NODE_58993_length_282_cov_6839.570850_g51054_i0forward_frame_3 - 0.0047 16.9 0.0 0.006 16.6 0.0 1.1 1 0 0 1 1 1 1 Asx homology domain DUF2582 PF10771.9 NODE_58993_length_282_cov_6839.570850_g51054_i0forward_frame_3 - 0.0086 16.2 0.0 0.014 15.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix domain (DUF2582) Ribosomal_L31e PF01198.19 ORF99761 - 3.3e-30 104.2 2.7 4.1e-30 103.8 2.7 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e Apc13p PF05839.11 ORF9942 - 0.018 15.2 1.8 0.17 12.1 1.8 2.0 1 1 0 1 1 1 0 Apc13p protein DUF4441 PF14536.6 ORF97949 - 0.0002 21.5 6.9 0.00047 20.3 6.9 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4441) Peptidase_S55 PF05580.12 ORF97949 - 0.038 13.9 0.2 0.04 13.9 0.2 1.1 1 0 0 1 1 1 0 SpoIVB peptidase S55 TraG-D_C PF12696.7 ORF97949 - 0.079 13.0 0.0 0.084 12.9 0.0 1.2 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG ImpA_N PF06812.12 ORF96753 - 0.026 14.6 1.0 0.072 13.2 0.2 1.9 1 1 1 2 2 2 0 ImpA, N-terminal, type VI secretion system DUF2179 PF10035.9 ORF96706 - 0.038 13.7 0.0 0.066 13.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) Ank_2 PF12796.7 ORF96187 - 9.4e-19 67.8 0.0 1.4e-18 67.3 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF96187 - 1.5e-18 66.9 0.1 1.7e-10 41.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF96187 - 2.2e-17 62.9 2.6 2.6e-08 34.0 0.1 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF96187 - 4.6e-17 61.6 0.1 3e-06 27.4 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF96187 - 1.8e-14 52.4 0.2 0.00036 20.8 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat YlzJ PF14035.6 ORF96187 - 0.12 12.6 0.0 29 5.0 0.0 2.7 1 1 2 3 3 3 0 YlzJ-like protein DUF3734 PF12536.8 ORF96187 - 0.22 11.9 0.0 0.61 10.4 0.0 1.9 1 1 1 2 2 2 0 Patatin phospholipase NAP PF00956.18 ORF95873 - 5.5e-06 25.8 3.3 1.1e-05 24.7 0.0 2.0 2 0 0 2 2 2 1 Nucleosome assembly protein (NAP) CENP-B_dimeris PF09026.10 ORF95873 - 0.0022 18.4 19.1 0.0029 18.0 19.1 1.2 1 0 0 1 1 1 1 Centromere protein B dimerisation domain NOA36 PF06524.12 ORF95873 - 0.0071 15.7 11.7 0.0078 15.6 11.7 1.1 1 0 0 1 1 1 1 NOA36 protein DUF2457 PF10446.9 ORF95873 - 0.012 14.8 15.8 0.013 14.7 15.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) RXT2_N PF08595.11 ORF95873 - 0.013 15.5 4.4 0.013 15.5 4.4 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal FAM176 PF14851.6 ORF95873 - 0.015 15.0 2.9 0.017 14.8 2.9 1.2 1 0 0 1 1 1 0 FAM176 family YL1 PF05764.13 ORF95873 - 0.032 14.3 10.8 0.028 14.6 10.8 1.1 1 0 0 1 1 1 0 YL1 nuclear protein GCIP PF13324.6 ORF95873 - 0.06 13.0 4.2 0.054 13.1 4.2 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting CDC45 PF02724.14 ORF95873 - 0.06 11.6 7.9 0.056 11.7 7.9 1.0 1 0 0 1 1 1 0 CDC45-like protein Sigma70_ner PF04546.13 ORF95873 - 0.062 13.2 6.5 0.062 13.2 6.5 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region DUF4611 PF15387.6 ORF95873 - 0.063 13.5 13.3 0.11 12.8 13.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) GP67 PF17634.2 ORF95873 - 0.087 13.3 18.2 0.13 12.6 18.2 1.3 1 0 0 1 1 1 0 Gene product 67 GEN1_C PF18380.1 ORF95873 - 0.12 13.3 3.8 0.13 13.1 3.8 1.2 1 0 0 1 1 1 0 Holliday junction resolvase Gen1 C-terminal domain HSP90 PF00183.18 ORF95873 - 0.13 11.1 3.4 0.16 10.9 3.4 1.0 1 0 0 1 1 1 0 Hsp90 protein RRN3 PF05327.11 ORF95873 - 0.32 9.5 4.0 0.28 9.7 4.0 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 PTPRCAP PF15713.5 ORF95873 - 0.46 10.8 11.0 0.52 10.6 11.0 1.1 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated TFB6 PF17110.5 ORF95873 - 0.5 10.1 3.0 0.54 10.0 3.0 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH TRAP_alpha PF03896.16 ORF95873 - 0.79 8.9 3.3 0.82 8.8 3.3 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit DNA_pol_phi PF04931.13 ORF95873 - 0.85 7.6 17.6 0.91 7.5 17.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 ORF95873 - 2.6 6.2 13.4 2.5 6.2 13.4 1.0 1 0 0 1 1 1 0 Nop14-like family TLP-20 PF06088.11 ORF95873 - 3.2 7.6 5.1 3.8 7.4 5.1 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) DUF4637 PF15470.6 ORF95873 - 4.7 6.9 10.9 5.9 6.6 10.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) FAM199X PF15814.5 ORF95330 - 0.085 11.9 6.7 0.094 11.8 6.7 1.0 1 0 0 1 1 1 0 Protein family FAM199X Caskin-Pro-rich PF16907.5 ORF95330 - 0.25 11.9 6.4 0.32 11.5 4.5 1.9 2 0 0 2 2 2 0 Proline rich region of Caskin proteins KIX_2 PF16987.5 ORF94902 - 0.0011 18.9 0.0 0.0014 18.6 0.0 1.2 1 0 0 1 1 1 1 KIX domain TFIIS_M PF07500.14 ORF94902 - 0.0053 17.2 0.0 0.0066 16.9 0.0 1.1 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain DUF4693 PF15764.5 ORF94789 - 0.19 11.3 0.3 0.18 11.3 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4693) SSB PF00436.25 ORF94766 - 0.079 13.0 0.0 0.42 10.7 0.0 1.8 1 1 1 2 2 2 0 Single-strand binding protein family RRM_1 PF00076.22 ORF94700 - 6.2e-09 35.5 0.0 1e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) OB_RNB PF08206.11 ORF94700 - 0.0058 16.3 0.1 0.012 15.3 0.1 1.5 1 0 0 1 1 1 1 Ribonuclease B OB domain RRM_5 PF13893.6 ORF94700 - 0.019 14.6 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 ORF94700 - 0.044 13.9 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Limkain b1 RRM_7 PF16367.5 ORF94525 - 0.067 13.3 0.1 0.1 12.7 0.1 1.4 1 1 0 1 1 1 0 RNA recognition motif DUF724 PF05266.14 ORF9437 - 0.2 11.5 10.5 0.24 11.2 10.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF4781 PF16013.5 ORF9437 - 0.31 9.8 2.3 0.36 9.6 2.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) CCDC53 PF10152.9 ORF9437 - 0.77 10.2 6.4 0.93 9.9 6.4 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex Borrelia_P83 PF05262.11 ORF9437 - 0.91 7.9 7.3 0.94 7.9 7.3 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein MRP-S26 PF14943.6 ORF9437 - 0.91 9.4 14.0 1.2 9.1 14.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 DUF4574 PF15141.6 ORF9437 - 5.2 7.0 7.0 3.5 7.6 5.0 1.8 1 1 1 2 2 2 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 TMEM174 PF15029.6 ORF93811 - 0.08 12.7 0.5 0.11 12.2 0.4 1.3 1 1 0 1 1 1 0 Transmembrane protein 174 Herpes_LMP1 PF05297.11 ORF93409 - 0.92 8.6 7.1 1 8.5 7.1 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) WBP-1 PF11669.8 ORF93330 - 0.016 15.8 1.9 0.028 15.0 1.9 1.4 1 0 0 1 1 1 0 WW domain-binding protein 1 ODV-E18 PF10717.9 ORF93330 - 0.85 9.5 2.8 1.8 8.5 0.0 2.1 1 1 1 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 IBN_N PF03810.19 ORF93238 - 0.0083 16.0 0.5 0.087 12.8 0.2 2.0 1 1 1 2 2 2 1 Importin-beta N-terminal domain Sgf11_N PF18519.1 ORF93238 - 0.014 15.0 0.1 0.034 13.7 0.1 1.6 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain DoxX PF07681.12 ORF93128 - 1.1e-08 35.5 8.9 1.1e-08 35.5 8.9 1.5 2 0 0 2 2 2 1 DoxX DoxD PF04173.13 ORF93128 - 0.00051 20.0 1.0 0.00067 19.6 1.0 1.1 1 0 0 1 1 1 1 TQO small subunit DoxD SURF4 PF02077.15 ORF93128 - 0.0012 18.5 0.6 0.0014 18.2 0.6 1.3 1 1 0 1 1 1 1 SURF4 family DUF1700 PF08006.11 ORF93128 - 0.15 11.6 3.8 0.14 11.7 3.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF1270 PF06900.11 ORF93128 - 0.18 12.2 1.7 0.33 11.3 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1270) SAM_3 PF18016.1 ORF92769 - 0.052 13.4 0.0 0.073 12.9 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF4741 PF15897.5 ORF92769 - 0.13 12.1 0.2 0.15 11.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) UNC119_bdg PF15435.6 ORF92610 - 0.38 10.3 3.5 0.48 9.9 3.5 1.2 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue Defensin_beta PF00711.19 ORF92345 - 0.13 12.3 4.5 3.6 7.7 0.2 2.6 3 0 0 3 3 3 0 Beta defensin Defensin_1 PF00323.19 ORF92345 - 0.33 11.5 2.5 3.1 8.4 0.1 2.4 2 0 0 2 2 2 0 Mammalian defensin TpcC PF12642.7 ORF9155 - 0.052 13.3 0.0 0.059 13.1 0.0 1.1 1 0 0 1 1 1 0 Conjugative transposon protein TcpC DUF4150 PF13665.6 ORF9155 - 0.1 12.8 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4150) Myticin-prepro PF10690.9 ORF91220 - 0.4 10.9 6.7 0.58 10.4 6.7 1.3 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Gemini_coat PF00844.18 ORF9109 - 0.04 13.4 0.4 0.047 13.2 0.4 1.0 1 0 0 1 1 1 0 Geminivirus coat protein/nuclear export factor BR1 family HSCB_C PF07743.13 ORF90758 - 3e-16 59.6 9.9 3.7e-16 59.4 9.9 1.1 1 0 0 1 1 1 1 HSCB C-terminal oligomerisation domain CARD_2 PF16739.5 ORF90758 - 0.026 14.5 1.0 0.043 13.8 1.0 1.5 1 1 0 1 1 1 0 Caspase recruitment domain DUF1090 PF06476.12 ORF90758 - 0.055 13.6 5.2 0.047 13.8 4.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1090) Pkinase PF00069.25 ORF90753 - 0.0068 15.8 0.1 0.012 15.1 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain DUF2207 PF09972.9 ORF89895 - 4 6.1 7.5 4.1 6.1 7.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4386 PF14329.6 ORF87982 - 0.044 13.7 0.4 0.044 13.7 0.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4386) SH3_9 PF14604.6 ORF87554 - 0.0017 18.2 0.3 0.0055 16.5 0.3 1.8 1 1 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF87554 - 0.0064 16.1 0.5 0.052 13.2 0.5 2.1 1 1 0 1 1 1 1 SH3 domain DUF2909 PF11137.8 ORF87337 - 0.042 13.8 0.0 0.074 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2909) Hepsin-SRCR PF09272.10 ORF87125 - 0.0017 18.8 0.0 0.0019 18.7 0.0 1.0 1 0 0 1 1 1 1 Hepsin, SRCR domain NEMO PF11577.8 ORF86960 - 0.0071 16.3 0.2 0.017 15.2 0.2 1.6 1 0 0 1 1 1 1 NF-kappa-B essential modulator NEMO Ribonuc_L-PSP PF01042.21 ORF86763 - 0.059 13.4 0.0 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 Endoribonuclease L-PSP dUTPase_2 PF08761.11 ORF86649 - 0.0059 16.8 2.1 0.011 16.0 2.1 1.4 1 1 0 1 1 1 1 dUTPase Neur_chan_LBD PF02931.23 ORF86649 - 0.011 15.1 0.2 0.013 15.0 0.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel ligand binding domain FAM199X PF15814.5 ORF86398 - 0.085 11.9 6.7 0.094 11.8 6.7 1.0 1 0 0 1 1 1 0 Protein family FAM199X Caskin-Pro-rich PF16907.5 ORF86398 - 0.25 11.9 6.4 0.32 11.5 4.5 1.9 2 0 0 2 2 2 0 Proline rich region of Caskin proteins Asp-Al_Ex PF06826.12 ORF86036 - 0.049 13.4 0.0 0.054 13.3 0.0 1.1 1 0 0 1 1 1 0 Predicted Permease Membrane Region MmgE_PrpD PF03972.14 ORF84672 - 0.2 10.1 0.0 0.24 9.9 0.0 1.0 1 0 0 1 1 1 0 MmgE/PrpD family PglZ PF08665.12 ORF8443 - 0.092 12.8 2.2 0.12 12.5 2.2 1.0 1 0 0 1 1 1 0 PglZ domain RDM PF11002.8 ORF8443 - 0.14 12.2 0.9 0.89 9.6 0.2 2.4 1 1 1 2 2 2 0 RFPL defining motif (RDM) CHD5 PF04420.14 ORF8443 - 0.21 11.4 2.8 0.28 11.0 2.7 1.4 1 1 0 1 1 1 0 CHD5-like protein ubiquitin PF00240.23 ORF84081 - 0.0036 17.0 0.0 0.0081 15.9 0.0 1.8 1 1 0 1 1 1 1 Ubiquitin family Phage_Gp19 PF09355.10 ORF83886 - 0.036 14.5 0.1 0.056 13.9 0.1 1.3 1 0 0 1 1 1 0 Phage protein Gp19/Gp15/Gp42 ECH_1 PF00378.20 ORF8379 - 6.1e-10 38.8 0.0 3.6e-09 36.3 0.0 1.8 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF8379 - 0.00047 19.8 0.0 0.00047 19.8 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase HHH_2 PF12826.7 ORF83478 - 0.098 12.8 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Helix-hairpin-helix motif TetR_C_2 PF08361.11 ORF83222 - 4.1e-30 104.4 0.3 4.5e-30 104.2 0.3 1.0 1 0 0 1 1 1 1 MAATS-type transcriptional repressor, C-terminal region TetR_C_6 PF13977.6 ORF83222 - 0.0047 17.1 0.0 0.0051 17.0 0.0 1.1 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_C_4 PF08359.11 ORF83222 - 0.1 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region PAN_1 PF00024.26 ORF83084 - 9.4e-08 31.9 0.4 1.5e-07 31.3 0.2 1.3 1 1 0 1 1 1 1 PAN domain PAN_4 PF14295.6 ORF83084 - 4e-05 23.4 0.5 5.4e-05 23.0 0.5 1.3 1 0 0 1 1 1 1 PAN domain PAN_3 PF08277.12 ORF83084 - 0.069 13.0 0.2 0.11 12.3 0.1 1.4 2 0 0 2 2 2 0 PAN-like domain SH3_9 PF14604.6 ORF82868 - 0.0017 18.2 0.3 0.0055 16.5 0.3 1.8 1 1 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF82868 - 0.0064 16.1 0.5 0.052 13.2 0.5 2.1 1 1 0 1 1 1 1 SH3 domain ATG7_N PF16420.5 ORF82815 - 0.093 12.4 0.7 0.11 12.2 0.7 1.1 1 0 0 1 1 1 0 Ubiquitin-like modifier-activating enzyme ATG7 N-terminus Ank PF00023.30 ORF8274 - 1.6e-10 41.0 0.1 3.6e-05 24.0 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF8274 - 2.3e-10 40.5 0.6 3e-05 24.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF8274 - 3e-10 40.6 0.1 4e-10 40.1 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF8274 - 2.4e-08 34.3 0.3 1.4e-07 31.9 0.2 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF8274 - 6.1e-08 32.3 0.2 0.011 16.2 0.1 2.3 2 0 0 2 2 2 2 Ankyrin repeat DUF1327 PF07041.11 ORF81907 - 0.025 14.6 0.1 0.04 13.9 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1327) Guanylate_kin PF00625.21 ORF80988 - 4.6e-21 75.3 0.0 5.5e-21 75.1 0.0 1.1 1 0 0 1 1 1 1 Guanylate kinase Ank PF00023.30 ORF80907 - 1.6e-10 41.0 0.1 3.6e-05 24.0 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF80907 - 2.3e-10 40.5 0.6 3e-05 24.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF80907 - 3e-10 40.6 0.1 4e-10 40.1 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF80907 - 2.4e-08 34.3 0.3 1.4e-07 31.9 0.2 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF80907 - 6.1e-08 32.3 0.2 0.011 16.2 0.1 2.3 2 0 0 2 2 2 2 Ankyrin repeat Arfaptin PF06456.13 ORF80864 - 0.064 12.8 1.3 0.08 12.5 1.3 1.0 1 0 0 1 1 1 0 Arfaptin-like domain Ras PF00071.22 ORF79903 - 8.7e-11 41.7 0.1 1.3e-10 41.1 0.1 1.3 1 0 0 1 1 1 1 Ras family Viral_DNA_bp PF00747.17 ORF79242 - 0.052 10.7 0.1 0.052 10.7 0.1 1.0 1 0 0 1 1 1 0 ssDNA binding protein RhoGEF PF00621.20 ORF79242 - 0.16 12.2 3.6 0.2 11.9 3.6 1.1 1 0 0 1 1 1 0 RhoGEF domain DUF202 PF02656.15 ORF79229 - 1.1 9.8 6.7 0.32 11.5 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF202) DUF4995 PF16386.5 ORF79229 - 3.2 7.8 5.8 0.74 9.9 1.2 1.9 1 1 1 2 2 2 0 Domain of unknown function DUF1713 PF08213.11 ORF78247 - 0.015 15.2 0.8 0.015 15.2 0.8 2.7 3 0 0 3 3 3 0 Mitochondrial domain of unknown function (DUF1713) Spc42p PF11544.8 ORF78247 - 0.045 13.7 1.1 0.068 13.2 1.1 1.5 1 1 0 1 1 1 0 Spindle pole body component Spc42p Cytokin_check_N PF10407.9 ORF7750 - 0.19 11.7 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 Cdc14 phosphatase binding protein N-terminus QVR PF17064.5 ORF77046 - 0.007 16.6 1.1 0.009 16.2 1.1 1.1 1 0 0 1 1 1 1 Sleepless protein Mac-1 PF09028.10 ORF76880 - 0.1 11.7 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Mac 1 ERbeta_N PF12497.8 ORF76538 - 0.043 13.6 2.5 0.056 13.2 2.5 1.2 1 0 0 1 1 1 0 Estrogen receptor beta Tryp_alpha_amyl PF00234.22 ORF7601 - 0.0075 16.7 0.4 0.0075 16.7 0.4 1.5 2 0 0 2 2 2 1 Protease inhibitor/seed storage/LTP family Peptidase_C12 PF01088.21 ORF74357 - 1.2e-15 57.8 0.0 1.4e-15 57.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 Ank PF00023.30 ORF73829 - 1.6e-10 41.0 0.1 3.6e-05 24.0 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF73829 - 2.3e-10 40.5 0.6 3e-05 24.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF73829 - 3e-10 40.6 0.1 4e-10 40.1 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF73829 - 2.4e-08 34.3 0.3 1.4e-07 31.9 0.2 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF73829 - 6.1e-08 32.3 0.2 0.011 16.2 0.1 2.3 2 0 0 2 2 2 2 Ankyrin repeat zf-C2H2 PF00096.26 ORF73063 - 2.2e-05 24.7 9.9 0.00012 22.3 5.9 2.2 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF73063 - 0.00017 22.1 8.1 0.00022 21.8 4.3 2.2 2 0 0 2 2 2 1 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF73063 - 0.0014 18.9 7.1 0.0084 16.5 2.2 2.3 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_6 PF13912.6 ORF73063 - 0.0029 17.6 2.8 0.0029 17.6 2.8 2.1 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_2 PF12756.7 ORF73063 - 0.0042 17.4 0.7 0.0055 17.0 0.7 1.3 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-BED PF02892.15 ORF73063 - 0.0072 16.3 5.8 0.0082 16.1 5.2 1.5 1 1 0 1 1 1 1 BED zinc finger DUF2547 PF10818.8 ORF73063 - 0.044 14.7 0.1 0.05 14.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) zf-H2C2_5 PF13909.6 ORF73063 - 0.38 10.6 11.6 0.27 11.0 6.9 2.3 2 0 0 2 2 2 0 C2H2-type zinc-finger domain Kelch_1 PF01344.25 ORF71727 - 4.3e-07 29.4 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF71727 - 4.2e-06 26.8 0.4 0.0093 16.2 0.0 2.3 1 1 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF71727 - 6.6e-05 22.8 0.1 0.42 10.6 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF71727 - 8.1e-05 22.5 0.0 0.024 14.6 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF71727 - 0.0011 18.8 0.1 0.56 10.3 0.1 2.2 2 0 0 2 2 2 2 Kelch motif Ras PF00071.22 ORF71629 - 1.5e-23 83.2 0.2 1.5e-23 83.2 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF71629 - 1.4e-15 57.5 0.1 1.5e-15 57.5 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF71629 - 0.0023 17.4 0.1 0.0023 17.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF71629 - 0.12 11.9 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Herpeto_peptide PF14409.6 ORF71076 - 2.7 8.3 4.4 26 5.2 0.5 2.3 1 1 1 2 2 2 0 Ribosomally synthesized peptide in Herpetosiphon DUF3959 PF13105.6 ORF69471 - 0.038 13.5 0.2 0.039 13.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks257.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks257.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks257.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks257.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:00:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF543 PF04418.12 ORF69179 - 0.014 15.3 0.4 0.018 15.0 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF543) FUSC_2 PF13515.6 ORF69179 - 0.025 14.7 0.0 0.03 14.4 0.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein-like DprA_WH PF17782.1 ORF69179 - 0.078 13.1 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 DprA winged helix domain RNA_pol_Rpc4 PF05132.14 ORF68931 - 0.19 12.2 0.3 1 9.8 0.3 1.9 1 1 0 1 1 1 0 RNA polymerase III RPC4 COMM_domain PF07258.14 ORF68554 - 2.9e-08 33.7 0.9 3.9e-08 33.3 0.9 1.2 1 0 0 1 1 1 1 COMM domain DUF4232 PF14016.6 ORF67876 - 0.0039 17.3 0.1 0.0046 17.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4232) NEL PF14496.6 ORF67876 - 0.18 11.2 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 C-terminal novel E3 ligase, LRR-interacting Peptidase_M41 PF01434.18 ORF67680 - 2.8e-08 33.8 0.3 3.3e-08 33.6 0.3 1.1 1 0 0 1 1 1 1 Peptidase family M41 GPCR_chapero_1 PF11904.8 ORF67680 - 0.076 12.4 0.3 0.09 12.2 0.3 1.0 1 0 0 1 1 1 0 GPCR-chaperone Actin PF00022.19 ORF67544 - 8.9e-39 133.2 0.0 9.7e-39 133.1 0.0 1.0 1 0 0 1 1 1 1 Actin Imm32 PF15566.6 ORF67226 - 0.2 11.5 0.5 5.3 6.9 0.0 2.2 2 0 0 2 2 2 0 Immunity protein 32 Acetyltransf_1 PF00583.25 ORF66119 - 4.5e-08 33.3 0.1 4.9e-08 33.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF66119 - 3.3e-06 27.1 0.1 3.9e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF66119 - 9.8e-05 22.2 0.1 0.00013 21.9 0.1 1.1 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 ORF66119 - 0.00013 22.3 0.1 0.00016 22.0 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF66119 - 0.015 16.0 0.0 0.017 15.8 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF66119 - 0.052 13.7 0.1 0.13 12.4 0.1 1.6 1 1 1 2 2 2 0 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 ORF66119 - 0.063 13.4 0.1 0.073 13.2 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 ORF66119 - 0.071 13.1 0.0 0.094 12.7 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Ank_5 PF13857.6 ORF64899 - 0.0016 18.7 0.0 0.0024 18.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Pribosyltran PF00156.27 ORF63574 - 0.0013 18.3 0.2 0.0021 17.6 0.2 1.5 1 1 0 1 1 1 1 Phosphoribosyl transferase domain TAF4 PF05236.14 ORF63574 - 0.0048 16.7 0.0 0.0048 16.7 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID component TAF4 family GTP_cyclohydro2 PF00925.20 ORF63574 - 0.13 11.9 0.5 0.44 10.1 0.2 1.7 1 1 1 2 2 2 0 GTP cyclohydrolase II DUF3446 PF11928.8 ORF63514 - 7 7.0 14.4 0.72 10.2 9.9 1.6 1 1 1 2 2 2 0 Early growth response N-terminal domain ImpA_N PF06812.12 ORF6278 - 0.026 14.6 1.0 0.072 13.2 0.2 1.9 1 1 1 2 2 2 0 ImpA, N-terminal, type VI secretion system CRAL_TRIO PF00650.20 ORF62547 - 1.3e-11 44.5 0.0 1.4e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF62547 - 0.069 13.3 0.0 0.077 13.2 0.0 1.0 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain DUF1100 PF06500.11 ORF62547 - 0.12 11.1 0.0 0.14 10.9 0.0 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) Sensor PF13796.6 ORF61283 - 0.066 13.3 5.8 0.076 13.1 5.8 1.1 1 0 0 1 1 1 0 Putative sensor AviRa PF11599.8 ORF61123 - 0.083 12.3 0.1 0.088 12.3 0.1 1.0 1 0 0 1 1 1 0 RRNA methyltransferase AviRa DR2241 PF18069.1 ORF60523 - 0.069 13.0 0.0 0.089 12.7 0.0 1.1 1 0 0 1 1 1 0 DR2241 stabilising domain YjcB PF15940.5 ORF59882 - 7.5e-45 151.0 4.5 8.3e-45 150.9 4.5 1.0 1 0 0 1 1 1 1 Family of unknown function Glyco_hydro_79n PF03662.14 ORF59312 - 0.36 9.7 1.6 0.41 9.5 1.6 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 79, N-terminal domain MmgE_PrpD PF03972.14 ORF58752 - 0.2 10.1 0.0 0.24 9.9 0.0 1.0 1 0 0 1 1 1 0 MmgE/PrpD family DUF5493 PF17597.2 ORF58705 - 0.052 13.8 0.2 0.5 10.6 0.2 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5493) Crust_neurohorm PF01147.17 ORF58671 - 0.13 12.1 0.1 0.87 9.4 0.0 1.9 2 0 0 2 2 2 0 Crustacean CHH/MIH/GIH neurohormone family Ntox28 PF15605.6 ORF58610 - 0.037 14.3 0.0 0.044 14.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial toxin 28 Tmemb_9 PF05434.11 ORF58168 - 0.26 11.2 0.3 0.34 10.8 0.3 1.1 1 0 0 1 1 1 0 TMEM9 RBP_receptor PF14752.6 ORF58168 - 0.26 9.8 1.7 0.29 9.6 1.7 1.0 1 0 0 1 1 1 0 Retinol binding protein receptor Peptidase_S68 PF10461.9 ORF58141 - 9.7 6.5 10.4 1.4 9.2 0.7 2.7 3 0 0 3 3 3 0 Peptidase S68 Pyr_redox_2 PF07992.14 ORF57900 - 0.00039 19.8 0.2 0.00039 19.8 0.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF57900 - 0.00094 18.5 0.1 0.001 18.4 0.1 1.1 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 ORF57900 - 0.0015 18.7 0.2 0.0026 18.0 0.2 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF57900 - 0.0033 16.7 0.1 0.005 16.1 0.1 1.2 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 ORF57900 - 0.0034 16.5 0.4 0.0035 16.5 0.4 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 ORF57900 - 0.0038 16.0 0.3 0.0049 15.6 0.3 1.1 1 0 0 1 1 1 1 HI0933-like protein AlaDh_PNT_C PF01262.21 ORF57900 - 0.028 13.7 0.2 0.03 13.6 0.2 1.0 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain GIDA PF01134.22 ORF57900 - 0.044 12.9 0.3 0.044 12.9 0.3 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 ORF57900 - 0.048 12.9 0.1 0.048 12.9 0.1 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MBG PF17883.1 ORF57900 - 0.18 12.5 0.0 0.19 12.4 0.0 1.2 1 0 0 1 1 1 0 MBG domain FAD_oxidored PF12831.7 ORF57900 - 0.26 10.6 1.3 0.36 10.1 1.3 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase DUF5554 PF17709.1 ORF57790 - 0.066 13.3 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5554) Inhibitor_I29 PF08246.12 ORF57772 - 0.05 14.0 0.7 0.17 12.3 0.7 1.9 1 1 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) DUF4386 PF14329.6 ORF56787 - 0.044 13.7 0.4 0.044 13.7 0.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4386) Filo_VP24 PF06389.11 ORF56221 - 0.033 13.7 1.8 0.036 13.6 1.8 1.0 1 0 0 1 1 1 0 Filovirus membrane-associated protein VP24 Phage_pRha PF09669.10 ORF55737 - 0.089 13.4 2.1 0.12 12.9 2.1 1.1 1 0 0 1 1 1 0 Phage regulatory protein Rha (Phage_pRha) MORN PF02493.20 ORF55029 - 6e-26 88.8 16.4 3.1e-09 36.2 0.2 4.1 4 0 0 4 4 4 4 MORN repeat PCSK9_C2 PF18464.1 ORF55003 - 0.068 13.2 0.8 0.068 13.2 0.8 1.8 2 0 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Chromate_transp PF02417.15 ORF54666 - 0.03 14.5 0.1 0.034 14.3 0.1 1.1 1 0 0 1 1 1 0 Chromate transporter Cohesin_HEAT PF12765.7 ORF54566 - 0.12 12.7 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 HEAT repeat associated with sister chromatid cohesion Toxin_23 PF08093.11 ORF54566 - 0.15 12.2 2.9 0.26 11.5 2.9 1.4 1 0 0 1 1 1 0 Magi 5 toxic peptide family SAM_3 PF18016.1 ORF5448 - 0.052 13.4 0.0 0.073 12.9 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF4741 PF15897.5 ORF5448 - 0.13 12.1 0.2 0.15 11.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) GP63 PF17471.2 ORF53335 - 0.025 14.7 1.0 0.063 13.5 0.7 1.8 1 1 1 2 2 2 0 Gene product 63 UQ_con PF00179.26 ORF53121 - 1.5e-26 92.7 0.1 1.7e-26 92.5 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF53121 - 0.16 12.3 0.1 0.16 12.3 0.1 1.2 1 0 0 1 1 1 0 RWD domain START PF01852.19 ORF5270 - 0.0004 19.9 0.0 0.00049 19.6 0.0 1.0 1 0 0 1 1 1 1 START domain ANKH PF07260.11 ORF51131 - 0.13 11.5 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Progressive ankylosis protein (ANKH) DUF2116 PF09889.9 ORF50995 - 0.38 10.8 1.3 0.63 10.1 1.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) PIR PF00399.19 ORF50886 - 0.22 11.1 2.7 0.36 10.4 2.7 1.4 1 0 0 1 1 1 0 Yeast PIR protein repeat C166 PF17615.2 ORF49438 - 0.16 12.1 0.3 0.2 11.8 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function Pkinase PF00069.25 ORF48388 - 2.1e-06 27.3 0.0 2.4e-06 27.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain HTH_20 PF12840.7 ORF48371 - 0.25 11.4 1.7 0.32 11.1 0.2 1.9 2 1 0 2 2 2 0 Helix-turn-helix domain SH3_9 PF14604.6 ORF47341 - 0.0017 18.2 0.3 0.0055 16.5 0.3 1.8 1 1 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF47341 - 0.0064 16.1 0.5 0.052 13.2 0.5 2.1 1 1 0 1 1 1 1 SH3 domain DNA_topoisoIV PF00521.20 ORF46599 - 0.0003 19.8 4.1 0.00032 19.7 4.1 1.0 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DUF2326 PF10088.9 ORF46599 - 0.02 14.6 0.8 0.027 14.2 0.8 1.3 1 1 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2326) PdaC PF13739.6 ORF46599 - 0.063 14.3 2.5 0.074 14.0 2.5 1.2 1 0 0 1 1 1 0 Deacetylase PdaC NEMO PF11577.8 ORF46186 - 0.03 14.3 0.0 0.053 13.5 0.0 1.5 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO HECT PF00632.25 ORF46093 - 1e-12 48.2 0.1 1.2e-12 47.9 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) ISAV_HA PF06215.11 ORF46093 - 0.028 13.5 0.0 0.034 13.3 0.0 1.1 1 0 0 1 1 1 0 Infectious salmon anaemia virus haemagglutinin DUF4954 PF16314.5 ORF45480 - 0.016 13.4 2.5 0.016 13.4 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Acetate_kinase PF00871.17 ORF45480 - 0.024 13.4 1.5 0.025 13.3 1.5 1.0 1 0 0 1 1 1 0 Acetokinase family RNase_HII PF01351.18 ORF45480 - 0.29 11.0 4.0 0.35 10.7 4.0 1.1 1 0 0 1 1 1 0 Ribonuclease HII Fib_alpha PF08702.10 ORF45480 - 1 9.5 10.6 1.1 9.4 10.6 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family zf-RING_11 PF17123.5 ORF45453 - 0.00042 20.0 1.6 0.22 11.3 0.1 2.5 3 0 0 3 3 3 2 RING-like zinc finger zf-RING_2 PF13639.6 ORF45453 - 0.025 14.9 1.7 0.64 10.4 1.7 2.3 1 1 0 1 1 1 0 Ring finger domain zf-rbx1 PF12678.7 ORF45453 - 0.041 14.2 0.2 0.08 13.2 0.2 1.5 1 1 0 1 1 1 0 RING-H2 zinc finger domain DAHP_synth_1 PF00793.20 ORF4478 - 3.8e-25 88.3 0.1 4.3e-25 88.1 0.1 1.0 1 0 0 1 1 1 1 DAHP synthetase I family TrbM PF07424.11 ORF44746 - 0.041 13.8 0.3 0.043 13.8 0.3 1.0 1 0 0 1 1 1 0 TrbM zf-Tim10_DDP PF02953.15 ORF44231 - 2e-16 59.4 3.2 3e-16 58.8 3.2 1.2 1 0 0 1 1 1 1 Tim10/DDP family zinc finger DUF842 PF05811.13 ORF44231 - 0.0017 18.0 3.6 0.002 17.8 3.6 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF842) PFL-like PF02901.15 ORF44231 - 0.01 14.5 0.3 0.012 14.3 0.3 1.0 1 0 0 1 1 1 0 Pyruvate formate lyase-like LIM_bind PF01803.16 ORF44040 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF44040 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain DUF202 PF02656.15 ORF43958 - 1.1 9.8 6.7 0.32 11.5 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF202) DUF4995 PF16386.5 ORF43958 - 3.2 7.8 5.8 0.74 9.9 1.2 1.9 1 1 1 2 2 2 0 Domain of unknown function HECT PF00632.25 ORF43897 - 6.4e-12 45.6 0.1 7.6e-12 45.3 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) K1377 PF15352.6 ORF43729 - 0.071 11.4 0.3 0.084 11.1 0.3 1.0 1 0 0 1 1 1 0 Susceptibility to monomelic amyotrophy GTP_cyclohydroI PF01227.22 ORF43462 - 0.084 12.3 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase I DUF4996 PF16387.5 ORF42655 - 0.018 15.5 0.1 0.022 15.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function Kazal_3 PF18434.1 ORF42381 - 0.021 14.5 0.1 0.047 13.4 0.1 1.6 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain DUF3524 PF12038.8 ORF41883 - 0.0056 16.5 0.0 0.0069 16.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3524) DUF2630 PF10944.8 ORF41883 - 0.069 13.6 0.0 0.08 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) DUF3953 PF13129.6 ORF41758 - 0.054 13.3 0.6 0.092 12.5 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3953) bZIP_1 PF00170.21 ORF41335 - 0.0011 19.0 6.4 0.03 14.4 1.4 2.8 2 1 0 2 2 2 2 bZIP transcription factor Shugoshin_N PF07558.11 ORF41335 - 0.0022 17.8 2.1 0.0022 17.8 2.1 2.1 2 0 0 2 2 2 1 Shugoshin N-terminal coiled-coil region YabA PF06156.13 ORF41335 - 0.0033 18.0 5.0 0.2 12.3 1.2 2.0 1 1 1 2 2 2 2 Initiation control protein YabA TSC22 PF01166.18 ORF41335 - 0.022 15.0 5.2 0.024 14.9 2.0 2.3 1 1 1 2 2 2 0 TSC-22/dip/bun family Fungal_TACC PF12709.7 ORF41335 - 0.079 13.4 3.8 2.6 8.6 1.4 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins NRBF2 PF08961.10 ORF41335 - 0.096 12.3 3.3 0.3 10.7 1.9 1.9 1 1 1 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator ZapB PF06005.12 ORF41335 - 0.12 12.8 4.5 1.1 9.7 3.1 2.3 1 1 1 2 2 2 0 Cell division protein ZapB Cep57_CLD_2 PF14197.6 ORF41335 - 0.16 12.1 3.7 1.3 9.2 0.8 2.2 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 Cnn_1N PF07989.11 ORF41335 - 0.18 12.0 4.7 15 5.9 2.7 2.6 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DivIC PF04977.15 ORF41335 - 0.24 11.2 2.4 2.8 7.8 0.4 2.3 2 1 0 2 2 2 0 Septum formation initiator TMF_DNA_bd PF12329.8 ORF41335 - 0.4 10.7 6.7 6.9 6.7 2.3 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding START PF01852.19 ORF41154 - 5.4e-07 29.2 0.0 5.5e-07 29.2 0.0 1.0 1 0 0 1 1 1 1 START domain ATP-synt_F6 PF05511.11 ORF41154 - 0.06 13.8 0.3 0.15 12.5 0.1 1.7 2 0 0 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 BofA PF07441.11 ORF40824 - 0.062 13.5 0.7 0.13 12.4 0.7 1.5 1 0 0 1 1 1 0 SigmaK-factor processing regulatory protein BofA LIM_bind PF01803.16 ORF40662 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF40662 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain LIM_bind PF01803.16 ORF40635 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF40635 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain Rotamase_3 PF13616.6 ORF40588 - 1.4e-20 74.0 0.0 1.6e-20 73.8 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.21 ORF40588 - 4.8e-20 72.3 0.0 6.8e-20 71.8 0.0 1.2 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF40588 - 0.00015 22.6 0.0 0.00016 22.5 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain DUF4996 PF16387.5 ORF40422 - 0.018 15.5 0.1 0.022 15.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function FYDLN_acid PF09538.10 ORF40120 - 0.026 15.2 0.5 0.031 15.0 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) MIF4G_like_2 PF09090.11 ORF40081 - 0.28 10.6 1.0 0.32 10.4 1.0 1.1 1 0 0 1 1 1 0 MIF4G like Tox-GHH PF15636.6 ORF39619 - 0.13 12.2 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 GHH signature containing HNH/Endo VII superfamily nuclease toxin LSM PF01423.22 ORF39053 - 3.9e-16 58.5 0.7 5.5e-16 58.0 0.7 1.3 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 ORF39053 - 0.0088 15.7 0.1 0.021 14.4 0.1 1.6 1 1 0 1 1 1 1 Hfq protein ADH_zinc_N_2 PF13602.6 ORF37995 - 1.7e-07 32.3 0.0 1.8e-07 32.3 0.0 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Ras PF00071.22 ORF37874 - 6.2e-15 55.2 0.0 7e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Ras family DUF3523 PF12037.8 ORF37439 - 0.021 14.2 22.6 0.024 14.0 22.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) IFRD_C PF04836.12 ORF37091 - 0.05 14.2 0.0 0.082 13.5 0.0 1.4 1 0 0 1 1 1 0 Interferon-related protein conserved region Pkinase PF00069.25 ORF37091 - 0.075 12.4 0.1 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 Protein kinase domain PP2C PF00481.21 ORF36838 - 1.6e-06 28.0 0.0 1.8e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF36838 - 3.5e-05 23.8 1.3 8.8e-05 22.5 0.1 1.7 1 1 1 2 2 2 1 Stage II sporulation protein E (SpoIIE) Complex1_49kDa PF00346.19 ORF36526 - 0.013 14.6 0.7 0.015 14.4 0.7 1.0 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RtcB PF01139.17 ORF35673 - 6.9e-38 130.9 0.3 7.6e-38 130.8 0.3 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Prominin PF05478.11 ORF34844 - 2.3 6.1 5.1 2.8 5.8 5.1 1.0 1 0 0 1 1 1 0 Prominin CRAL_TRIO PF00650.20 ORF34754 - 3.2e-08 33.4 0.0 3.9e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain LIM_bind PF01803.16 ORF34440 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF34440 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain DLH PF01738.18 ORF34287 - 0.036 13.6 0.0 0.038 13.5 0.0 1.1 1 0 0 1 1 1 0 Dienelactone hydrolase family LIP PF03583.14 ORF34287 - 0.039 13.3 0.0 0.042 13.2 0.0 1.1 1 0 0 1 1 1 0 Secretory lipase zf-LITAF-like PF10601.9 ORF34174 - 1.6e-06 28.3 2.1 1.9e-06 28.0 2.1 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Cys_rich_KTR PF14205.6 ORF34174 - 0.021 14.6 1.9 0.032 14.0 1.9 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR Elf1 PF05129.13 ORF34174 - 0.045 13.8 1.0 0.061 13.4 1.0 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like DAO PF01266.24 ORF34168 - 0.081 12.5 0.0 0.088 12.4 0.0 1.1 1 0 0 1 1 1 0 FAD dependent oxidoreductase NPR1_like_C PF12313.8 ORF34168 - 0.2 11.2 0.0 0.27 10.7 0.0 1.1 1 0 0 1 1 1 0 NPR1/NIM1 like defence protein C terminal Fox-1_C PF12414.8 ORF33420 - 0.13 12.7 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Calcitonin gene-related peptide regulator C terminal Fox-1_C PF12414.8 ORF33418 - 0.12 12.7 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Calcitonin gene-related peptide regulator C terminal RseA_C PF03873.13 ORF33355 - 0.085 13.1 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Anti sigma-E protein RseA, C-terminal domain UcrQ PF02939.16 ORF33233 - 0.066 13.2 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 UcrQ family Acyltransferase PF01553.21 ORF3283 - 2e-07 30.7 0.0 2.4e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Acyltransferase RE_HindVP PF09519.10 ORF32502 - 0.027 13.5 0.1 0.029 13.4 0.1 1.0 1 0 0 1 1 1 0 HindVP restriction endonuclease NUP50 PF08911.11 ORF32048 - 0.11 13.2 0.0 0.12 13.1 0.0 1.2 1 0 0 1 1 1 0 NUP50 (Nucleoporin 50 kDa) Dr_adhesin PF12393.8 ORF32048 - 9.9 6.6 6.8 2 8.8 0.7 2.3 2 0 0 2 2 2 0 Dr family adhesin cNMP_binding PF00027.29 ORF31786 - 0.00016 21.7 0.0 0.00067 19.7 0.0 1.9 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain GTP_EFTU_D3 PF03143.17 ORF31751 - 7.3e-08 32.7 0.0 8.1e-08 32.6 0.0 1.0 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain DSHCT PF08148.12 ORF31751 - 0.12 12.1 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 DSHCT (NUC185) domain CENP-H PF05837.12 ORF31112 - 0.00071 20.0 2.4 0.00086 19.7 2.4 1.1 1 0 0 1 1 1 1 Centromere protein H (CENP-H) TolA_bind_tri PF16331.5 ORF31112 - 0.0011 19.1 0.1 0.0021 18.1 0.1 1.5 1 1 0 1 1 1 1 TolA binding protein trimerisation ZapB PF06005.12 ORF31112 - 0.0012 19.3 1.1 0.0016 18.8 1.1 1.2 1 0 0 1 1 1 1 Cell division protein ZapB DUF4201 PF13870.6 ORF31112 - 0.0052 16.5 1.7 0.0054 16.5 1.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) Spc7 PF08317.11 ORF31112 - 0.0056 15.6 1.5 0.0062 15.5 1.5 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Herpes_UL6 PF01763.16 ORF31112 - 0.011 14.2 1.5 0.013 14.0 1.5 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Jnk-SapK_ap_N PF09744.9 ORF31112 - 0.013 15.7 1.3 0.016 15.4 1.3 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Anillin_N PF16018.5 ORF31112 - 0.019 15.5 0.7 0.027 15.1 0.1 1.6 2 0 0 2 2 2 0 Anillin N-terminus YabA PF06156.13 ORF31112 - 0.02 15.5 2.3 0.024 15.3 2.3 1.1 1 0 0 1 1 1 0 Initiation control protein YabA FlaC_arch PF05377.11 ORF31112 - 0.032 14.6 1.4 0.073 13.5 1.4 1.7 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF4446 PF14584.6 ORF31112 - 0.04 13.9 1.1 0.045 13.7 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF5082 PF16888.5 ORF31112 - 0.041 14.2 2.0 0.05 13.9 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) DivIC PF04977.15 ORF31112 - 0.054 13.3 0.5 0.076 12.8 0.5 1.3 1 0 0 1 1 1 0 Septum formation initiator bZIP_1 PF00170.21 ORF31112 - 0.065 13.3 12.6 0.87 9.7 11.7 2.5 1 1 1 2 2 2 0 bZIP transcription factor LIM_bind PF01803.16 ORF3094 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF3094 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain LAMTOR5 PF16672.5 ORF30721 - 1.8e-07 31.0 0.0 2.5e-07 30.5 0.0 1.2 1 1 0 1 1 1 1 Ragulator complex protein LAMTOR5 DUF4189 PF13827.6 ORF30339 - 0.069 13.7 0.2 0.086 13.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4189) L71 PF02448.15 ORF29901 - 0.11 13.0 1.4 0.11 12.9 0.9 1.3 1 1 0 1 1 1 0 L71 family CPP1-like PF11833.8 ORF29317 - 0.17 11.5 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Far-17a_AIG1 PF04750.14 ORF29080 - 0.00041 19.7 0.5 0.00042 19.7 0.5 1.1 1 0 0 1 1 1 1 FAR-17a/AIG1-like protein RRM_1 PF00076.22 ORF28806 - 6.2e-09 35.5 0.0 1e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) OB_RNB PF08206.11 ORF28806 - 0.0058 16.3 0.1 0.012 15.3 0.1 1.5 1 0 0 1 1 1 1 Ribonuclease B OB domain RRM_5 PF13893.6 ORF28806 - 0.019 14.6 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 ORF28806 - 0.044 13.9 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Limkain b1 PCSK9_C2 PF18464.1 ORF28102 - 0.068 13.2 0.8 0.068 13.2 0.8 1.8 2 0 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain dCache_2 PF08269.11 ORF28081 - 0.3 10.2 0.0 0.38 9.9 0.0 1.1 1 0 0 1 1 1 0 Cache domain DUF1816 PF08846.10 ORF2789 - 0.057 13.4 0.0 0.083 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1816) AlphaC_C PF17480.2 ORF26918 - 0.036 14.1 0.0 0.079 13.0 0.0 1.5 2 0 0 2 2 2 0 AlphaC C-terminal zf-RING_11 PF17123.5 ORF26833 - 0.037 13.8 3.8 0.4 10.5 0.3 2.5 2 0 0 2 2 2 0 RING-like zinc finger Gly_acyl_tr_N PF06021.11 ORF25866 - 0.059 13.5 1.1 0.068 13.3 1.1 1.0 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase PHZA_PHZB PF03284.13 ORF25574 - 0.029 14.0 0.0 0.032 13.9 0.0 1.1 1 0 0 1 1 1 0 Phenazine biosynthesis protein A/B DUF1398 PF07166.11 ORF25191 - 0.039 14.0 0.0 0.052 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) MOZ_SAS PF01853.18 ORF25093 - 6.9e-07 29.1 0.1 8.4e-07 28.8 0.1 1.1 1 0 0 1 1 1 1 MOZ/SAS family Lactamase_B_6 PF16661.5 ORF25093 - 0.021 14.3 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain NMN_transporter PF04973.12 ORF24853 - 0.0047 16.9 0.8 0.0054 16.7 0.8 1.0 1 0 0 1 1 1 1 Nicotinamide mononucleotide transporter COesterase PF00135.28 ORF23310 - 0.12 11.2 0.2 0.14 11.0 0.2 1.0 1 0 0 1 1 1 0 Carboxylesterase family Herpes_UL3 PF03369.13 ORF23197 - 0.025 15.1 0.4 0.032 14.8 0.4 1.1 1 0 0 1 1 1 0 Herpesvirus UL3 protein Mce4_CUP1 PF11887.8 ORF23131 - 0.12 11.8 0.2 0.13 11.7 0.2 1.0 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative DUF3430 PF11912.8 ORF22427 - 0.46 10.5 6.5 0.59 10.2 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3430) LIM_bind PF01803.16 ORF21825 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF21825 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain HrpB1_HrpK PF09613.10 ORF21609 - 0.16 11.6 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB1_HrpK) DUF1987 PF09345.10 ORF21281 - 0.04 13.6 0.2 0.42 10.3 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1987) PMM PF03332.13 ORF20561 - 1.9e-38 132.5 0.4 2.1e-38 132.3 0.4 1.0 1 0 0 1 1 1 1 Eukaryotic phosphomannomutase LIM_bind PF01803.16 ORF19953 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF19953 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain Syd PF07348.12 ORF18978 - 1.7e-39 135.3 0.2 1.8e-39 135.2 0.2 1.0 1 0 0 1 1 1 1 Syd protein (SUKH-2) DUF4688 PF15752.5 ORF1845 - 0.08 12.2 0.1 0.1 11.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4688) Big_3_2 PF12245.8 ORF18258 - 0.073 13.3 0.7 0.38 11.0 0.7 1.9 1 1 0 1 1 1 0 Bacterial Ig-like domain NMN_transporter PF04973.12 ORF17888 - 0.0047 16.9 0.8 0.0054 16.7 0.8 1.0 1 0 0 1 1 1 1 Nicotinamide mononucleotide transporter CAT PF00302.18 ORF17079 - 0.0019 18.2 0.2 0.0022 18.0 0.2 1.1 1 0 0 1 1 1 1 Chloramphenicol acetyltransferase SAM_3 PF18016.1 ORF1677 - 0.052 13.4 0.0 0.073 12.9 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF4741 PF15897.5 ORF1677 - 0.13 12.1 0.2 0.15 11.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) Amidoligase_2 PF12224.8 ORF16712 - 0.039 13.6 0.5 0.087 12.5 0.5 1.5 1 1 0 1 1 1 0 Putative amidoligase enzyme TPH PF13868.6 ORF16712 - 0.25 9.8 10.4 0.55 8.7 10.4 1.6 1 1 0 1 1 1 0 Trichohyalin-plectin-homology domain ODV-E18 PF10717.9 ORF16478 - 3 7.8 5.1 1.6 8.6 1.8 1.9 1 1 1 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 LIM_bind PF01803.16 ORF16371 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF16371 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain Env-gp36 PF09590.10 ORF15982 - 0.039 12.4 0.1 0.041 12.3 0.1 1.1 1 0 0 1 1 1 0 Lentivirus surface glycoprotein PAN_4 PF14295.6 ORF15506 - 4.5e-09 36.1 6.4 4.5e-09 36.1 6.4 1.6 1 1 1 2 2 2 1 PAN domain PAN_1 PF00024.26 ORF15506 - 0.0006 19.7 3.7 0.00089 19.2 3.6 1.4 1 1 0 1 1 1 1 PAN domain YjhX_toxin PF09857.9 ORF15506 - 0.11 12.5 0.0 3.9 7.5 0.0 2.1 2 0 0 2 2 2 0 Putative toxin of bacterial toxin-antitoxin pair DUF4171 PF13775.6 ORF1530 - 0.0043 17.5 2.0 0.0053 17.2 2.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4171) CAC1F_C PF16885.5 ORF1530 - 0.016 14.9 0.3 0.018 14.7 0.3 1.1 1 0 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term PGC7_Stella PF15549.6 ORF14773 - 0.033 14.2 0.2 0.041 13.9 0.2 1.1 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain NDUF_B7 PF05676.13 ORF14773 - 0.093 12.5 2.9 0.21 11.3 2.9 1.6 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) LIM_bind PF01803.16 ORF13863 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF13863 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain NUDE_C PF04880.13 ORF13563 - 0.24 11.9 3.4 0.27 11.7 3.4 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Sigma_1_2 PF03084.14 ORF12691 - 0.0089 15.3 0.1 0.0092 15.3 0.1 1.0 1 0 0 1 1 1 1 Reoviral Sigma1/Sigma2 family TarS_C1 PF18674.1 ORF12691 - 0.019 14.9 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 TarS beta-glycosyltransferase C-terminal domain 1 Cauli_DNA-bind PF03310.13 ORF12691 - 0.058 13.5 0.2 0.066 13.3 0.2 1.2 1 0 0 1 1 1 0 Caulimovirus DNA-binding protein FAM199X PF15814.5 ORF11308 - 0.085 11.9 6.7 0.094 11.8 6.7 1.0 1 0 0 1 1 1 0 Protein family FAM199X Caskin-Pro-rich PF16907.5 ORF11308 - 0.25 11.9 6.4 0.32 11.5 4.5 1.9 2 0 0 2 2 2 0 Proline rich region of Caskin proteins Intimin_C PF07979.11 ORF112178 - 0.00012 22.5 1.6 0.00017 22.0 1.6 1.3 1 1 0 1 1 1 1 Intimin C-type lectin domain DUF1566 PF07603.11 ORF112178 - 0.046 14.1 0.1 0.051 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1566) Pkinase PF00069.25 ORF11202 - 0.00093 18.6 0.0 0.00094 18.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Corona_NS2A PF05213.12 ORF110645 - 0.087 12.1 0.0 0.097 12.0 0.0 1.1 1 0 0 1 1 1 0 Coronavirus NS2A protein SBF2 PF12335.8 ORF110645 - 0.11 12.1 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Myotubularin protein RCC1_2 PF13540.6 ORF110385 - 0.00033 20.4 4.9 0.11 12.4 0.4 2.6 2 1 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat CHD5 PF04420.14 ORF110211 - 0.057 13.3 7.0 0.025 14.4 3.2 1.8 1 1 1 2 2 2 0 CHD5-like protein RNA_pol_Rpc4 PF05132.14 ORF110185 - 0.17 12.3 8.9 0.18 12.2 8.9 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 CLN3 PF02487.17 ORF110185 - 0.22 10.5 1.5 0.23 10.5 1.5 1.0 1 0 0 1 1 1 0 CLN3 protein V_ATPase_I PF01496.19 ORF110185 - 0.26 9.2 8.9 0.27 9.1 8.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NPR3 PF03666.13 ORF110185 - 0.54 9.0 14.9 0.61 8.8 14.9 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 ORF110185 - 1.8 7.2 9.5 1.9 7.2 9.5 1.0 1 0 0 1 1 1 0 Presenilin Connexin PF00029.19 ORF110185 - 3 7.5 10.1 3.3 7.4 10.1 1.2 1 0 0 1 1 1 0 Connexin Ank_2 PF12796.7 ORF110069 - 0.0077 16.8 0.0 0.0081 16.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF110069 - 0.025 15.1 0.0 0.05 14.2 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeat Ank_4 PF13637.6 ORF110069 - 0.027 15.0 0.0 0.043 14.4 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) SET PF00856.28 ORF109866 - 0.00093 19.6 0.0 0.0012 19.3 0.0 1.1 1 0 0 1 1 1 1 SET domain TusA PF01206.17 ORF109866 - 0.093 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Sulfurtransferase TusA CYLD_phos_site PF16607.5 ORF109150 - 0.03 14.2 0.2 0.038 13.8 0.2 1.2 1 0 0 1 1 1 0 Phosphorylation region of CYLD, unstructured DUF1104 PF06518.11 ORF108044 - 0.13 12.7 2.8 0.16 12.4 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) Granulin PF00396.18 ORF107306 - 9.6e-07 29.0 11.0 1.4e-06 28.5 11.0 1.2 1 0 0 1 1 1 1 Granulin AflR PF08493.10 ORF107182 - 0.64 9.4 4.7 0.72 9.3 4.7 1.1 1 0 0 1 1 1 0 Aflatoxin regulatory protein Ribosomal_L31e PF01198.19 ORF107174 - 2.1e-30 104.8 2.1 2.6e-30 104.5 2.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e Merozoite_SPAM PF07133.11 ORF106357 - 0.66 9.9 38.2 0.77 9.7 38.2 1.1 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) BUD22 PF09073.10 ORF106357 - 2.7 7.2 35.0 3.3 6.9 35.0 1.0 1 0 0 1 1 1 0 BUD22 Nop53 PF07767.11 ORF106357 - 3.3 7.0 39.7 3.7 6.9 39.7 1.0 1 0 0 1 1 1 0 Nop53 (60S ribosomal biogenesis) DUF3381 PF11861.8 ORF106357 - 7.1 6.4 36.7 9.4 6.0 36.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) CoA_transf_3 PF02515.17 ORF106078 - 0.23 10.5 3.0 0.26 10.3 3.0 1.0 1 0 0 1 1 1 0 CoA-transferase family III Mucin PF01456.17 ORF106078 - 1.4 8.9 28.8 1.7 8.6 28.8 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein SAP130_C PF16014.5 ORF106078 - 7.5 5.5 8.6 8.3 5.4 8.6 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus Rpn3_C PF08375.11 ORF10607 - 0.065 13.7 0.1 1.6 9.3 0.0 2.1 1 1 1 2 2 2 0 Proteasome regulatory subunit C-terminal EBA-175_VI PF11556.8 ORF10562 - 0.041 14.2 0.6 0.057 13.8 0.6 1.1 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 Chalcone PF02431.15 ORF105363 - 0.11 11.9 1.1 0.14 11.6 1.1 1.1 1 0 0 1 1 1 0 Chalcone-flavanone isomerase CRAL_TRIO PF00650.20 ORF105154 - 1.3e-11 44.5 0.0 1.4e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF105154 - 0.069 13.3 0.0 0.077 13.2 0.0 1.0 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain DUF1100 PF06500.11 ORF105154 - 0.12 11.1 0.0 0.14 10.9 0.0 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) DUF2550 PF10739.9 ORF105051 - 0.0094 15.9 0.6 0.014 15.4 0.5 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2550) MM_CoA_mutase PF01642.22 ORF104630 - 0.21 10.1 0.1 0.24 9.9 0.1 1.0 1 0 0 1 1 1 0 Methylmalonyl-CoA mutase Dynactin PF12455.8 ORF1043 - 0.13 11.4 0.1 0.13 11.4 0.1 1.0 1 0 0 1 1 1 0 Dynein associated protein Ring_hydroxyl_A PF00848.19 ORF104042 - 2.8e-07 30.7 0.3 3.5e-07 30.4 0.3 1.1 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) PHM7_cyt PF14703.6 ORF103833 - 1.6e-06 28.5 0.0 2.1e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter NTase_sub_bind PF08780.11 ORF103833 - 0.033 14.1 0.1 0.036 14.0 0.1 1.1 1 0 0 1 1 1 0 Nucleotidyltransferase substrate binding protein like YIEGIA PF14045.6 ORF103833 - 0.087 11.7 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 YIEGIA protein SUKH_5 PF14567.6 ORF103264 - 0.017 14.9 0.5 0.019 14.7 0.5 1.1 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall LIM_bind PF01803.16 ORF102735 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein ARID PF01388.21 ORF102735 - 0.071 13.8 0.0 0.09 13.5 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain SARA PF11409.8 ORF100667 - 0.083 13.1 0.2 0.17 12.1 0.2 1.6 1 0 0 1 1 1 0 Smad anchor for receptor activation (SARA) DUF5456 PF17539.2 ORF100589 - 0.16 11.9 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5456) YdaT_toxin PF06254.11 NODE_60295_length_274_cov_1.393305_g52355_i0reverse_frame_1 - 0.055 14.0 0.0 0.091 13.3 0.0 1.5 1 1 1 2 2 2 0 Putative bacterial toxin ydaT Mak16 PF04874.14 NODE_60294_length_274_cov_1.401674_g52354_i0reverse_frame_1 - 4e-16 59.5 4.2 6.9e-16 58.7 4.2 1.4 1 0 0 1 1 1 1 Mak16 protein C-terminal region DUF4477 PF14780.6 NODE_60294_length_274_cov_1.401674_g52354_i0reverse_frame_1 - 0.59 9.7 4.8 0.74 9.4 4.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4477) TRAM1 PF08390.11 NODE_60291_length_274_cov_1.451883_g52351_i0reverse_frame_1 - 0.14 11.8 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 TRAM1-like protein Pkinase PF00069.25 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 7.2e-26 91.1 0.2 7.6e-26 91.0 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 2.7e-15 56.4 0.0 3e-15 56.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 3.6e-05 23.2 0.0 3.9e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 8.9e-05 21.9 0.0 0.0001 21.8 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.00016 21.7 0.0 0.00016 21.7 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.00055 19.1 0.0 0.00058 19.0 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Haspin_kinase PF12330.8 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.038 12.9 0.1 0.046 12.6 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain RIO1 PF01163.22 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.059 13.0 0.0 0.067 12.8 0.0 1.1 1 0 0 1 1 1 0 RIO1 family YrbL-PhoP_reg PF10707.9 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.077 12.5 0.0 0.087 12.3 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL FTA2 PF13095.6 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.16 11.6 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUF4423 PF14394.6 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.2 11.4 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) BTV_NS2 PF04514.12 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_1 - 0.086 11.7 0.0 0.1 11.4 0.0 1.0 1 0 0 1 1 1 0 Bluetongue virus non-structural protein NS2 Na_Ca_ex PF01699.24 NODE_60278_length_274_cov_1.711297_g52338_i0reverse_frame_1 - 0.00015 21.8 5.2 0.00017 21.6 5.2 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein DUF3767 PF12597.8 NODE_60278_length_274_cov_1.711297_g52338_i0reverse_frame_1 - 0.24 11.3 0.4 0.36 10.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) Med3 PF11593.8 NODE_60269_length_274_cov_1.907950_g52329_i0reverse_frame_1 - 4.1 6.5 6.4 4.6 6.3 6.4 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Dyp_perox PF04261.12 NODE_60267_length_274_cov_2.158996_g52327_i0forward_frame_1 - 0.002 17.2 0.1 0.0024 16.9 0.1 1.1 1 0 0 1 1 1 1 Dyp-type peroxidase family CHASE4 PF05228.13 NODE_60267_length_274_cov_2.158996_g52327_i0forward_frame_1 - 0.02 15.1 0.0 0.86 9.8 0.0 2.0 1 1 0 1 1 1 0 CHASE4 domain TAT_signal PF10518.9 NODE_60267_length_274_cov_2.158996_g52327_i0forward_frame_1 - 0.08 12.8 0.1 0.08 12.8 0.1 1.7 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Peptidase_S8 PF00082.22 NODE_60265_length_274_cov_2.184100_g52325_i0reverse_frame_1 - 4.5e-13 49.1 0.5 5.2e-13 48.9 0.5 1.0 1 0 0 1 1 1 1 Subtilase family Tyr_Deacylase PF02580.16 NODE_60262_length_274_cov_2.322176_g52322_i0forward_frame_1 - 0.055 14.0 0.1 0.055 14.0 0.1 1.1 1 0 0 1 1 1 0 D-Tyr-tRNA(Tyr) deacylase NLPC_P60 PF00877.19 NODE_60250_length_274_cov_2.623431_g52310_i0forward_frame_1 - 0.06 13.4 0.0 0.087 12.9 0.0 1.3 1 1 0 1 1 1 0 NlpC/P60 family DUF1382 PF07131.11 NODE_60249_length_274_cov_2.673640_g52309_i0reverse_frame_1 - 0.15 12.1 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1382) Ribosomal_S18 PF01084.20 NODE_60249_length_274_cov_2.673640_g52309_i0forward_frame_1 - 0.029 14.6 0.1 0.052 13.8 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein S18 zf-C3HC4 PF00097.25 NODE_60248_length_274_cov_2.698745_g52308_i0reverse_frame_1 - 0.06 13.2 2.9 0.06 13.2 2.9 1.8 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) 7tm_7 PF08395.12 NODE_60248_length_274_cov_2.698745_g52308_i0forward_frame_1 - 0.0062 15.8 0.1 0.0071 15.6 0.1 1.0 1 0 0 1 1 1 1 7tm Chemosensory receptor DUF2953 PF11167.8 NODE_60248_length_274_cov_2.698745_g52308_i0forward_frame_1 - 0.016 15.3 0.4 0.03 14.4 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2953) CrgA PF06781.12 NODE_60248_length_274_cov_2.698745_g52308_i0forward_frame_1 - 0.5 10.5 2.3 0.56 10.3 2.3 1.4 1 1 0 1 1 1 0 Cell division protein CrgA MsyB PF13984.6 NODE_60247_length_274_cov_2.711297_g52307_i0reverse_frame_1 - 0.0016 18.7 0.8 0.003 17.9 0.4 1.6 1 1 1 2 2 2 1 MsyB protein LodA_N PF17990.1 NODE_60247_length_274_cov_2.711297_g52307_i0reverse_frame_1 - 0.0036 17.3 2.3 0.004 17.1 2.3 1.1 1 0 0 1 1 1 1 L-Lysine epsilon oxidase N-terminal Fucose_iso_C PF02952.17 NODE_60247_length_274_cov_2.711297_g52307_i0reverse_frame_1 - 0.16 11.7 0.3 0.2 11.4 0.3 1.1 1 0 0 1 1 1 0 L-fucose isomerase, C-terminal domain ArfGap PF01412.18 NODE_60247_length_274_cov_2.711297_g52307_i0reverse_frame_1 - 0.32 11.1 4.9 0.4 10.8 4.9 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Inhibitor_I29 PF08246.12 NODE_60246_length_274_cov_2.811715_g52306_i0forward_frame_1 - 0.023 15.1 6.0 0.032 14.7 6.0 1.2 1 0 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) Phage_CI_repr PF07022.13 NODE_60236_length_274_cov_3.175732_g52296_i0forward_frame_1 - 0.15 12.2 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain LPAM_2 PF13627.6 NODE_60233_length_274_cov_3.309623_g52293_i0reverse_frame_1 - 0.15 11.9 0.1 0.24 11.3 0.1 1.3 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site DUF2835 PF11197.8 NODE_60223_length_274_cov_8.393305_g52283_i0forward_frame_1 - 0.0036 17.1 0.1 0.0048 16.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2835) Clavanin PF05452.11 NODE_60222_length_274_cov_23.866109_g52282_i0forward_frame_1 - 0.32 11.2 3.9 8.6 6.6 0.2 2.1 1 1 1 2 2 2 0 Clavanin LisH_TPL PF17814.1 NODE_60216_length_274_cov_49.305439_g52276_i0reverse_frame_1 - 0.0043 16.7 0.4 0.017 14.8 0.1 2.0 2 0 0 2 2 2 1 LisH-like dimerisation domain DUF2689 PF10894.8 NODE_60211_length_274_cov_57.707113_g52271_i0reverse_frame_1 - 0.15 11.9 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2689) DUF563 PF04577.14 NODE_60209_length_274_cov_58.569038_g52269_i0forward_frame_1 - 7.4e-06 26.3 0.1 9.1e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF563) Sensor PF13796.6 NODE_60201_length_274_cov_70.154812_g52261_i0forward_frame_1 - 0.14 12.2 0.0 0.16 12.0 0.0 1.0 1 0 0 1 1 1 0 Putative sensor Efg1 PF10153.9 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_1 - 0.067 13.5 4.7 0.077 13.4 4.7 1.2 1 0 0 1 1 1 0 rRNA-processing protein Efg1 PEMT PF04191.13 NODE_60188_length_274_cov_114.715481_g52248_i0reverse_frame_1 - 2.1e-10 40.9 0.0 2.4e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 NODE_60188_length_274_cov_114.715481_g52248_i0reverse_frame_1 - 1.3e-06 28.7 0.0 1.5e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF1295 PF06966.12 NODE_60188_length_274_cov_114.715481_g52248_i0reverse_frame_1 - 0.0025 17.4 0.1 0.0034 16.9 0.1 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) IL34 PF15036.6 NODE_60183_length_274_cov_146.066946_g52243_i0reverse_frame_1 - 0.029 14.4 0.8 0.034 14.2 0.7 1.3 1 1 0 1 1 1 0 Interleukin 34 DUF2732 PF10809.8 NODE_60183_length_274_cov_146.066946_g52243_i0reverse_frame_1 - 0.036 13.9 0.1 0.053 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2732) Herpes_capsid PF06112.11 NODE_60181_length_274_cov_149.866109_g52241_i0reverse_frame_1 - 0.056 13.5 3.3 0.062 13.4 3.3 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Glyco_hydro_88 PF07470.13 NODE_60167_length_274_cov_665.020921_g52227_i0forward_frame_1 - 0.017 14.2 0.1 0.023 13.8 0.1 1.1 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 DUF1249 PF06853.12 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_1 - 0.054 13.5 0.1 0.067 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1249) Na_H_antiporter PF03553.14 NODE_60165_length_274_cov_1275.953975_g52225_i0forward_frame_1 - 0.0093 15.2 0.6 0.0093 15.2 0.6 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter family tRNA-synt_2e PF02091.15 NODE_60164_length_275_cov_0.883333_g52224_i0reverse_frame_1 - 0.2 10.9 0.2 0.22 10.7 0.2 1.0 1 0 0 1 1 1 0 Glycyl-tRNA synthetase alpha subunit TspO_MBR PF03073.15 NODE_60164_length_275_cov_0.883333_g52224_i0forward_frame_1 - 0.12 12.5 4.7 0.15 12.1 4.7 1.1 1 0 0 1 1 1 0 TspO/MBR family TPR_2 PF07719.17 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.00028 20.8 0.3 0.47 10.7 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.0036 17.8 0.1 2.7 8.8 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC8 PF04049.13 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.0091 16.1 0.2 0.0091 16.1 0.2 1.2 1 0 0 1 1 1 1 Anaphase promoting complex subunit 8 / Cdc23 ANAPC3 PF12895.7 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.0091 16.2 0.5 0.88 9.8 0.0 2.2 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 AcylCoA_dehyd_C PF12186.8 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.023 14.8 0.5 0.029 14.5 0.5 1.1 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase C terminal TPR_7 PF13176.6 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.036 14.1 0.8 0.52 10.5 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.077 13.2 0.1 7.8 7.0 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat ALG3 PF05208.13 NODE_60136_length_275_cov_1.620833_g52196_i0reverse_frame_1 - 5.6e-06 26.0 0.1 6.6e-06 25.8 0.1 1.1 1 0 0 1 1 1 1 ALG3 protein Pox_polyA_pol PF03296.13 NODE_60136_length_275_cov_1.620833_g52196_i0reverse_frame_1 - 0.014 15.3 0.2 0.016 15.1 0.2 1.2 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Cg6151-P PF10233.9 NODE_60136_length_275_cov_1.620833_g52196_i0reverse_frame_1 - 0.068 13.5 0.0 0.081 13.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein CG6151-P GET2 PF08690.10 NODE_60134_length_275_cov_1.720833_g52194_i0reverse_frame_1 - 1 8.9 2.6 1.2 8.7 2.6 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 LON_substr_bdg PF02190.16 NODE_60131_length_275_cov_1.754167_g52191_i0reverse_frame_1 - 0.034 14.0 0.6 0.041 13.8 0.6 1.2 1 0 0 1 1 1 0 ATP-dependent protease La (LON) substrate-binding domain Rhabdo_NV PF02484.15 NODE_60131_length_275_cov_1.754167_g52191_i0reverse_frame_1 - 0.039 14.1 0.1 0.041 14.0 0.1 1.2 1 0 0 1 1 1 0 Rhabdovirus Non-virion protein DUF1158 PF06643.11 NODE_60129_length_275_cov_1.758333_g52189_i0forward_frame_1 - 0.058 13.9 2.2 0.07 13.7 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1158) RNA_pol_Rpb2_3 PF04565.16 NODE_60124_length_275_cov_1.879167_g52184_i0reverse_frame_1 - 0.003 17.7 0.9 0.0053 16.9 0.9 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 MamL-1 PF09596.10 NODE_60124_length_275_cov_1.879167_g52184_i0forward_frame_1 - 0.047 13.9 1.0 0.087 13.1 1.0 1.4 1 0 0 1 1 1 0 MamL-1 domain Calici_PP_N PF08405.11 NODE_60119_length_275_cov_2.033333_g52179_i0forward_frame_1 - 0.32 9.8 2.9 0.35 9.6 2.9 1.0 1 0 0 1 1 1 0 Viral polyprotein N-terminal Endonuclease_NS PF01223.23 NODE_60108_length_275_cov_2.450000_g52168_i0forward_frame_1 - 0.029 14.2 1.2 0.031 14.1 1.2 1.0 1 0 0 1 1 1 0 DNA/RNA non-specific endonuclease Transp_cyt_pur PF02133.15 NODE_60106_length_275_cov_2.470833_g52166_i0reverse_frame_1 - 5.7e-09 35.3 0.1 6.9e-09 35.0 0.1 1.1 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin RRM_occluded PF16842.5 NODE_60106_length_275_cov_2.470833_g52166_i0forward_frame_1 - 0.16 11.9 0.0 0.43 10.5 0.0 1.7 1 1 1 2 2 2 0 Occluded RNA-recognition motif Pox_A21 PF05323.12 NODE_60102_length_275_cov_2.691667_g52162_i0forward_frame_1 - 0.01 16.4 0.1 0.013 16.1 0.1 1.2 1 0 0 1 1 1 0 Poxvirus A21 Protein Fibin PF15819.5 NODE_60101_length_275_cov_2.725000_g52161_i0reverse_frame_1 - 0.039 13.7 2.1 0.039 13.7 2.1 1.1 1 0 0 1 1 1 0 Fin bud initiation factor homologue PhzC-PhzF PF02567.16 NODE_60095_length_275_cov_2.987500_g52155_i0reverse_frame_1 - 0.00041 19.9 0.0 0.00051 19.6 0.0 1.1 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein DUF1272 PF06906.11 NODE_60092_length_275_cov_3.045833_g52152_i0reverse_frame_1 - 0.013 15.6 2.0 0.018 15.2 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) Cytokin_check_N PF10407.9 NODE_60088_length_275_cov_3.750000_g52148_i0forward_frame_1 - 0.0059 16.5 0.4 0.012 15.6 0.1 1.6 2 0 0 2 2 2 1 Cdc14 phosphatase binding protein N-terminus DMT_6 PF04342.12 NODE_60086_length_275_cov_5.479167_g52146_i0forward_frame_1 - 0.038 14.2 0.2 0.062 13.5 0.2 1.3 1 0 0 1 1 1 0 Putative member of DMT superfamily (DUF486) DUF5543 PF17697.1 NODE_60085_length_275_cov_12.725000_g52145_i0reverse_frame_1 - 0.11 12.8 0.5 0.13 12.6 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5543) HTH_ParB PF17762.1 NODE_60085_length_275_cov_12.725000_g52145_i0forward_frame_1 - 0.093 12.6 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 HTH domain found in ParB protein DUF1331 PF07048.11 NODE_60080_length_275_cov_25.841667_g52140_i0reverse_frame_1 - 0.16 11.7 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1331) Pkinase PF00069.25 NODE_60080_length_275_cov_25.841667_g52140_i0forward_frame_1 - 5.1e-06 26.0 0.0 5.6e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_60080_length_275_cov_25.841667_g52140_i0forward_frame_1 - 0.096 12.0 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase DUF4865 PF16157.5 NODE_60072_length_275_cov_46.925000_g52132_i0reverse_frame_1 - 0.088 12.8 4.8 0.1 12.6 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4865) DUF3316 PF11777.8 NODE_60072_length_275_cov_46.925000_g52132_i0reverse_frame_1 - 0.33 11.0 3.5 0.41 10.7 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3316) RGS_DHEX PF18148.1 NODE_60072_length_275_cov_46.925000_g52132_i0reverse_frame_1 - 1.4 9.1 11.2 0.15 12.2 5.1 1.9 1 1 1 2 2 2 0 Regulator of G-protein signalling DHEX domain RB_A PF01858.17 NODE_60070_length_275_cov_47.750000_g52130_i0forward_frame_1 - 0.054 13.3 0.4 0.065 13.1 0.4 1.1 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks258.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks258.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks258.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks258.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:08:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YMF19 PF02326.15 NODE_60057_length_275_cov_70.466667_g52117_i0reverse_frame_1 - 0.14 12.9 7.6 0.17 12.7 7.6 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 Caudal_act PF04731.12 NODE_60056_length_275_cov_70.500000_g52116_i0reverse_frame_1 - 0.15 12.4 2.4 3 8.2 2.4 2.0 1 1 0 1 1 1 0 Caudal like protein activation region SDH_sah PF01972.16 NODE_60055_length_275_cov_71.437500_g52115_i0reverse_frame_1 - 0.086 11.8 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Serine dehydrogenase proteinase GET2 PF08690.10 NODE_60052_length_275_cov_79.891667_g52112_i0forward_frame_1 - 0.76 9.4 4.2 0.84 9.3 4.2 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 DNA_pol_phi PF04931.13 NODE_60052_length_275_cov_79.891667_g52112_i0forward_frame_1 - 4.6 5.2 15.1 5.2 5.0 15.1 1.0 1 0 0 1 1 1 0 DNA polymerase phi SR-25 PF10500.9 NODE_60041_length_275_cov_408.250000_g52101_i0reverse_frame_1 - 0.023 14.3 18.3 0.029 14.0 18.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CobT PF06213.12 NODE_60041_length_275_cov_408.250000_g52101_i0reverse_frame_1 - 2.2 7.6 13.7 2.6 7.4 13.7 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Dsh_C PF12316.8 NODE_60041_length_275_cov_408.250000_g52101_i0reverse_frame_1 - 7 7.0 14.6 7.8 6.8 14.6 1.0 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal DUF4939 PF16297.5 NODE_60034_length_276_cov_1.066390_g52094_i0forward_frame_1 - 0.085 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4939) HTH_30 PF13556.6 NODE_60031_length_276_cov_1.157676_g52091_i0reverse_frame_1 - 0.026 14.3 0.0 0.038 13.8 0.0 1.2 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Sugar_tr PF00083.24 NODE_60017_length_276_cov_1.406639_g52077_i0reverse_frame_1 - 0.0022 16.9 0.5 0.0027 16.6 0.5 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter LPD16 PF18830.1 NODE_60007_length_276_cov_1.576763_g52067_i0forward_frame_1 - 0.12 12.4 0.3 0.19 11.7 0.3 1.3 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 16 SPASM PF13186.6 NODE_60005_length_276_cov_1.634855_g52065_i0forward_frame_1 - 0.059 13.9 1.3 0.43 11.1 1.3 2.1 1 1 0 1 1 1 0 Iron-sulfur cluster-binding domain Coatomer_b_Cpla PF14806.6 NODE_60004_length_276_cov_1.643154_g52064_i0reverse_frame_1 - 0.073 13.1 0.1 0.087 12.8 0.1 1.0 1 0 0 1 1 1 0 Coatomer beta subunit appendage platform COX2-transmemb PF09125.10 NODE_60001_length_276_cov_1.697095_g52061_i0reverse_frame_1 - 0.35 10.7 1.4 0.63 9.9 1.4 1.4 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane DEC-1_N PF04625.13 NODE_60000_length_276_cov_1.713693_g52060_i0forward_frame_1 - 4.8 6.1 8.7 4.8 6.1 8.7 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region VEFS-Box PF09733.9 NODE_59991_length_276_cov_1.804979_g52051_i0forward_frame_1 - 0.011 15.6 1.0 0.012 15.5 1.0 1.0 1 0 0 1 1 1 0 VEFS-Box of polycomb protein POB3_N PF17292.2 NODE_59987_length_276_cov_1.896266_g52047_i0reverse_frame_1 - 0.021 15.3 0.3 1.7 9.2 0.0 2.1 2 0 0 2 2 2 0 POB3-like N-terminal PH domain zf-C2H2_9 PF16293.5 NODE_59987_length_276_cov_1.896266_g52047_i0reverse_frame_1 - 0.097 12.5 0.3 0.15 11.9 0.3 1.5 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) Rad33 PF08730.10 NODE_59984_length_276_cov_2.041494_g52044_i0reverse_frame_1 - 0.027 14.5 0.0 0.03 14.3 0.0 1.1 1 0 0 1 1 1 0 Rad33 APOC4 PF15119.6 NODE_59981_length_276_cov_2.116183_g52041_i0forward_frame_1 - 0.087 13.1 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Apolipoprotein C4 Gal4_dimer PF03902.13 NODE_59967_length_276_cov_2.443983_g52027_i0reverse_frame_1 - 0.051 13.7 0.2 0.074 13.2 0.2 1.3 1 0 0 1 1 1 0 Gal4-like dimerisation domain HHA PF05321.11 NODE_59967_length_276_cov_2.443983_g52027_i0reverse_frame_1 - 0.065 13.6 0.1 0.1 12.9 0.1 1.3 1 0 0 1 1 1 0 Haemolysin expression modulating protein YmgB PF10798.8 NODE_59957_length_276_cov_2.970954_g52017_i0reverse_frame_1 - 7.8e-24 83.3 1.8 7.8e-24 83.3 1.8 1.4 2 0 0 2 2 2 1 Biofilm development protein YmgB/AriR Sde2_N_Ubi PF13019.6 NODE_59954_length_276_cov_3.165975_g52014_i0forward_frame_1 - 0.038 13.8 0.0 0.2 11.5 0.0 1.8 2 0 0 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain Elf1 PF05129.13 NODE_59952_length_276_cov_3.286307_g52012_i0forward_frame_1 - 2.7 8.1 6.4 17 5.6 6.4 1.9 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Ezh2_MCSS PF18600.1 NODE_59951_length_276_cov_3.348548_g52011_i0reverse_frame_1 - 0.019 14.6 0.2 0.035 13.7 0.2 1.4 1 0 0 1 1 1 0 MCSS domain zf-RING_2 PF13639.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 1.9e-13 50.5 5.6 2.9e-13 49.9 5.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 3.9e-10 39.4 4.7 5.8e-10 38.9 4.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 6.6e-08 32.7 6.9 2.1e-07 31.1 6.9 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 7.9e-08 31.9 3.2 1.6e-07 30.9 3.2 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 5.3e-07 29.4 3.2 8.8e-07 28.7 3.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 1.8e-05 24.6 1.8 3.1e-05 23.9 1.8 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 2.5e-05 24.2 3.7 4.2e-05 23.4 3.7 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 7.2e-05 22.6 2.1 0.00012 21.9 2.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING-like PF08746.11 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.0015 18.8 1.7 0.0029 17.9 1.7 1.5 1 0 0 1 1 1 1 RING-like domain Zn_ribbon_17 PF17120.5 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.0026 17.4 3.0 0.0044 16.6 3.0 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.0072 16.4 2.8 0.022 14.8 2.8 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.015 15.5 5.9 0.11 12.7 5.9 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.026 14.4 5.4 0.097 12.5 5.2 1.9 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-C3H2C3 PF17122.5 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.17 11.9 5.8 0.43 10.7 5.8 1.8 1 1 0 1 1 1 0 Zinc-finger PHD PF00628.29 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.18 11.7 4.1 0.43 10.5 4.1 1.7 1 1 0 1 1 1 0 PHD-finger RINGv PF12906.7 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.49 10.6 8.1 0.13 12.5 2.1 2.6 3 0 0 3 3 3 0 RING-variant domain zf-P11 PF03854.14 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.51 10.0 4.8 0.17 11.5 1.1 1.9 2 0 0 2 2 2 0 P-11 zinc finger Creb_binding PF09030.10 NODE_59934_length_276_cov_59.589212_g51994_i0forward_frame_1 - 0.11 13.2 0.7 1.3 9.8 0.1 2.0 1 1 1 2 2 2 0 Creb binding tRNA_synt_1c_R1 PF04558.15 NODE_59929_length_276_cov_63.265560_g51989_i0forward_frame_1 - 0.0056 16.7 1.6 0.0071 16.4 1.1 1.5 1 1 0 1 1 1 1 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 6PGD PF00393.19 NODE_59929_length_276_cov_63.265560_g51989_i0forward_frame_1 - 0.06 12.7 0.5 0.074 12.4 0.5 1.1 1 0 0 1 1 1 0 6-phosphogluconate dehydrogenase, C-terminal domain AAA_assoc PF14363.6 NODE_59929_length_276_cov_63.265560_g51989_i0forward_frame_1 - 0.087 13.2 0.2 0.099 13.0 0.2 1.2 1 0 0 1 1 1 0 Domain associated at C-terminal with AAA Lipid_DES PF08557.10 NODE_59925_length_276_cov_65.518672_g51985_i0forward_frame_1 - 2e-13 49.6 0.6 5.9e-07 28.9 0.3 2.3 2 0 0 2 2 2 2 Sphingolipid Delta4-desaturase (DES) DUF1365 PF07103.11 NODE_59921_length_276_cov_68.435685_g51981_i0reverse_frame_1 - 0.033 13.9 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1365) Plasmid_stab_B PF10784.9 NODE_59916_length_276_cov_73.360996_g51976_i0reverse_frame_1 - 0.021 14.6 0.1 0.029 14.2 0.1 1.3 1 0 0 1 1 1 0 Plasmid stability protein Orthoreo_P10 PF07204.11 NODE_59912_length_276_cov_77.912863_g51972_i0reverse_frame_1 - 0.0063 16.4 0.0 0.0071 16.3 0.0 1.1 1 0 0 1 1 1 1 Orthoreovirus membrane fusion protein p10 DUF679 PF05078.12 NODE_59912_length_276_cov_77.912863_g51972_i0reverse_frame_1 - 0.061 13.3 0.1 0.072 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF679) DUF3446 PF11928.8 NODE_59901_length_276_cov_123.991701_g51961_i0forward_frame_1 - 0.21 11.9 17.4 0.26 11.6 17.4 1.2 1 0 0 1 1 1 0 Early growth response N-terminal domain DUF5527 PF17665.1 NODE_59898_length_276_cov_127.966805_g51958_i0reverse_frame_1 - 0.036 13.6 0.2 0.041 13.4 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5527) OrfB_Zn_ribbon PF07282.11 NODE_59897_length_276_cov_134.614108_g51957_i0forward_frame_1 - 0.0049 16.8 0.3 0.0068 16.3 0.3 1.3 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Macoilin PF09726.9 NODE_59896_length_276_cov_135.713693_g51956_i0reverse_frame_1 - 5.6 5.4 12.4 5.5 5.4 12.4 1.1 1 0 0 1 1 1 0 Macoilin family RNA_pol_L_2 PF13656.6 NODE_59895_length_276_cov_150.539419_g51955_i0forward_frame_1 - 2.8e-16 59.1 0.0 4.2e-16 58.5 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Coilin_N PF15862.5 NODE_59895_length_276_cov_150.539419_g51955_i0forward_frame_1 - 0.16 11.8 4.8 0.19 11.5 4.8 1.1 1 0 0 1 1 1 0 Coilin N-terminus Peptidase_C48 PF02902.19 NODE_59893_length_276_cov_174.759336_g51953_i0forward_frame_1 - 0.0054 16.6 0.1 0.0059 16.5 0.1 1.1 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain DUF3896 PF13035.6 NODE_59893_length_276_cov_174.759336_g51953_i0forward_frame_1 - 0.054 13.7 0.7 8.8 6.6 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3896) DUF390 PF04094.14 NODE_59890_length_276_cov_198.410788_g51950_i0reverse_frame_1 - 0.0012 17.3 0.6 0.0013 17.2 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF390) Phage_antitermQ PF06530.12 NODE_59881_length_276_cov_7244.908714_g51941_i0forward_frame_1 - 0.21 11.5 0.0 0.28 11.1 0.0 1.2 1 0 0 1 1 1 0 Phage antitermination protein Q Defensin_beta_2 PF13841.6 NODE_59880_length_277_cov_0.888430_g51940_i0forward_frame_2 - 0.025 15.0 1.5 0.043 14.3 1.5 1.4 1 0 0 1 1 1 0 Beta defensin Orf78 PF06024.12 NODE_59877_length_277_cov_1.045455_g51937_i0reverse_frame_3 - 0.001 19.3 0.1 0.0011 19.2 0.1 1.2 1 0 0 1 1 1 1 Orf78 (ac78) EssA PF10661.9 NODE_59877_length_277_cov_1.045455_g51937_i0reverse_frame_3 - 0.0014 18.5 0.2 0.0014 18.4 0.2 1.1 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein EssA Na_Ala_symp PF01235.17 NODE_59877_length_277_cov_1.045455_g51937_i0reverse_frame_3 - 0.013 14.8 0.3 0.015 14.6 0.3 1.0 1 0 0 1 1 1 0 Sodium:alanine symporter family PBP3 PF18056.1 NODE_59877_length_277_cov_1.045455_g51937_i0reverse_frame_3 - 0.053 13.7 0.1 0.24 11.5 0.1 1.9 1 1 0 1 1 1 0 Penicillin Binding Protein 3 Domain DUF5408 PF17402.2 NODE_59877_length_277_cov_1.045455_g51937_i0reverse_frame_3 - 0.078 12.9 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5408) TMEM154 PF15102.6 NODE_59875_length_277_cov_1.095041_g51935_i0reverse_frame_3 - 9.4e-05 22.3 0.2 0.00011 22.1 0.2 1.1 1 0 0 1 1 1 1 TMEM154 protein family AJAP1_PANP_C PF15298.6 NODE_59875_length_277_cov_1.095041_g51935_i0reverse_frame_3 - 0.0056 16.9 0.3 0.0064 16.7 0.3 1.0 1 0 0 1 1 1 1 AJAP1/PANP C-terminus Baculo_11_kDa PF06143.11 NODE_59875_length_277_cov_1.095041_g51935_i0reverse_frame_3 - 0.0078 15.8 1.0 0.013 15.0 1.0 1.3 1 0 0 1 1 1 1 Baculovirus 11 kDa family DAP10 PF07213.11 NODE_59875_length_277_cov_1.095041_g51935_i0reverse_frame_3 - 0.018 15.0 0.0 0.024 14.6 0.0 1.3 1 0 0 1 1 1 0 DAP10 membrane protein Tmemb_9 PF05434.11 NODE_59875_length_277_cov_1.095041_g51935_i0reverse_frame_3 - 0.018 14.9 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 TMEM9 Orf78 PF06024.12 NODE_59875_length_277_cov_1.095041_g51935_i0reverse_frame_3 - 0.041 14.2 0.1 0.047 14.0 0.1 1.1 1 0 0 1 1 1 0 Orf78 (ac78) DUF3827 PF12877.7 NODE_59875_length_277_cov_1.095041_g51935_i0reverse_frame_3 - 0.062 11.7 0.7 0.072 11.5 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) LRR_4 PF12799.7 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 2.3e-06 27.8 0.1 2.6e-05 24.5 0.1 2.1 2 0 0 2 2 2 1 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 8.4e-06 25.4 0.1 0.019 15.0 0.0 2.9 3 0 0 3 3 3 2 Leucine Rich repeat LRR_8 PF13855.6 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 2.1e-05 24.2 0.7 0.00085 19.0 0.7 2.5 1 1 0 1 1 1 1 Leucine rich repeat LRR_1 PF00560.33 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 0.00033 20.8 0.1 1.1 10.1 0.0 2.4 2 0 0 2 2 2 2 Leucine Rich Repeat LRR_9 PF14580.6 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 0.038 13.5 0.0 0.063 12.8 0.0 1.3 1 1 0 1 1 1 0 Leucine-rich repeat PTN_MK_N PF05196.13 NODE_59873_length_277_cov_1.169421_g51933_i0reverse_frame_3 - 0.18 12.1 0.3 0.24 11.6 0.3 1.1 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, N-terminal domain CPSF73-100_C PF11718.8 NODE_59868_length_277_cov_1.380165_g51928_i0forward_frame_2 - 0.0062 16.1 0.5 0.0066 16.0 0.5 1.1 1 0 0 1 1 1 1 Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term SesA PF17107.5 NODE_59868_length_277_cov_1.380165_g51928_i0forward_frame_2 - 0.031 14.5 0.4 0.041 14.1 0.4 1.2 1 1 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases ABC2_membrane PF01061.24 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 0.01 15.3 7.7 0.012 15.1 7.7 1.0 1 0 0 1 1 1 1 ABC-2 type transporter CrgA PF06781.12 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 0.28 11.2 3.7 0.38 10.8 3.7 1.2 1 0 0 1 1 1 0 Cell division protein CrgA DHHC PF01529.20 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 0.36 10.9 4.0 0.52 10.4 4.0 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Insulin_TMD PF17870.1 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 1.5 8.9 6.9 1.1 9.4 4.4 2.0 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Baculo_11_kDa PF06143.11 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 9.8 5.8 7.3 3.8 7.2 5.0 1.5 1 1 0 1 1 1 0 Baculovirus 11 kDa family GCM PF03615.15 NODE_59861_length_277_cov_1.578512_g51921_i0reverse_frame_2 - 0.02 14.8 1.9 0.022 14.6 1.9 1.1 1 0 0 1 1 1 0 GCM motif protein PknG_rubred PF16919.5 NODE_59861_length_277_cov_1.578512_g51921_i0forward_frame_2 - 0.3 11.2 2.4 0.4 10.8 2.4 1.2 1 0 0 1 1 1 0 Protein kinase G rubredoxin domain PV-1 PF06637.11 NODE_59858_length_277_cov_1.640496_g51918_i0reverse_frame_3 - 0.1 11.4 0.6 0.11 11.3 0.6 1.0 1 0 0 1 1 1 0 PV-1 protein (PLVAP) MCR_alpha PF02249.17 NODE_59858_length_277_cov_1.640496_g51918_i0reverse_frame_3 - 0.15 12.5 0.9 0.18 12.2 0.9 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain DUF4786 PF16027.5 NODE_59858_length_277_cov_1.640496_g51918_i0reverse_frame_2 - 0.085 13.4 0.3 0.12 12.9 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4786) MFS_Mycoplasma PF07672.13 NODE_59856_length_277_cov_1.657025_g51916_i0reverse_frame_2 - 0.055 12.8 0.0 0.061 12.6 0.0 1.0 1 0 0 1 1 1 0 Mycoplasma MFS transporter Pkinase_Tyr PF07714.17 NODE_59856_length_277_cov_1.657025_g51916_i0forward_frame_3 - 0.046 13.0 0.1 0.052 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase GBP PF02263.19 NODE_59856_length_277_cov_1.657025_g51916_i0forward_frame_2 - 4e-10 39.4 0.0 4.4e-10 39.3 0.0 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain Sec23_helical PF04815.15 NODE_59853_length_277_cov_1.710744_g51913_i0forward_frame_3 - 2.1e-14 53.2 0.0 2.5e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 Sec23/Sec24 helical domain Peptidase_U32 PF01136.19 NODE_59852_length_277_cov_1.714876_g51912_i0forward_frame_2 - 5e-44 150.2 0.0 5.4e-44 150.1 0.0 1.0 1 0 0 1 1 1 1 Peptidase family U32 Tachystatin_B PF11478.8 NODE_59852_length_277_cov_1.714876_g51912_i0forward_frame_2 - 0.0036 17.2 0.7 0.0056 16.6 0.7 1.3 1 0 0 1 1 1 1 Antimicrobial chitin binding protein tachystatin B DNA_pol_A_exo1 PF01612.20 NODE_59851_length_277_cov_1.723140_g51911_i0forward_frame_3 - 5e-21 75.2 0.0 5.2e-21 75.1 0.0 1.0 1 0 0 1 1 1 1 3'-5' exonuclease fn3_5 PF06280.12 NODE_59850_length_277_cov_1.723140_g51910_i0reverse_frame_2 - 0.014 16.0 0.0 0.015 15.9 0.0 1.2 1 0 0 1 1 1 0 Fn3-like domain ODV-E18 PF10717.9 NODE_59848_length_277_cov_1.760331_g51908_i0forward_frame_3 - 3.3 7.6 6.7 4.7 7.1 6.7 1.4 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 E1-E2_ATPase PF00122.20 NODE_59846_length_277_cov_1.793388_g51906_i0reverse_frame_2 - 0.08 12.5 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 E1-E2 ATPase YlaH PF14036.6 NODE_59846_length_277_cov_1.793388_g51906_i0forward_frame_2 - 0.075 13.4 2.2 0.11 12.9 2.2 1.2 1 0 0 1 1 1 0 YlaH-like protein DUF2457 PF10446.9 NODE_59844_length_277_cov_1.842975_g51904_i0forward_frame_2 - 0.24 10.5 1.7 0.23 10.6 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) LPP PF04728.13 NODE_59844_length_277_cov_1.842975_g51904_i0forward_frame_2 - 2.1 8.8 4.4 32 5.0 4.4 2.2 1 1 0 1 1 1 0 Lipoprotein leucine-zipper CTNNBL PF08216.11 NODE_59838_length_277_cov_1.933884_g51898_i0forward_frame_2 - 0.22 11.7 1.9 0.25 11.6 0.9 1.5 2 0 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear Not3 PF04065.15 NODE_59836_length_277_cov_1.942149_g51896_i0forward_frame_3 - 0.046 13.1 0.2 0.051 13.0 0.2 1.0 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component DUF3350 PF11830.8 NODE_59836_length_277_cov_1.942149_g51896_i0forward_frame_3 - 0.39 11.1 3.4 5.5 7.4 1.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3350) Phage_Mu_Gam PF07352.12 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_3 - 0.0042 17.0 2.2 0.0042 17.0 2.2 1.5 2 0 0 2 2 2 1 Bacteriophage Mu Gam like protein YojJ PF10372.9 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_3 - 0.0075 16.3 0.4 0.013 15.6 0.4 1.4 1 0 0 1 1 1 1 Bacterial membrane-spanning protein N-terminus DUF5094 PF17015.5 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_3 - 0.21 11.7 7.0 0.23 11.5 7.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) TMPIT PF07851.13 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_3 - 0.64 9.2 4.0 0.72 9.0 4.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein CCDC92 PF14916.6 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_2 - 0.00043 20.0 1.7 0.00059 19.5 1.7 1.2 1 0 0 1 1 1 1 Coiled-coil domain of unknown function BPS PF08947.10 NODE_59833_length_277_cov_1.975207_g51893_i0forward_frame_2 - 0.073 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 BPS (Between PH and SH2) NICE-1 PF15845.5 NODE_59832_length_277_cov_1.979339_g51892_i0reverse_frame_3 - 0.47 11.3 8.1 0.58 11.0 8.1 1.1 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family IlvGEDA_leader PF08046.11 NODE_59828_length_277_cov_2.000000_g51888_i0reverse_frame_2 - 2.6e-16 58.7 7.5 3.3e-16 58.4 7.5 1.1 1 0 0 1 1 1 1 IlvGEDA operon leader peptide UPF0258 PF06789.12 NODE_59828_length_277_cov_2.000000_g51888_i0reverse_frame_2 - 0.013 15.6 0.1 0.018 15.2 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0258) Response_reg PF00072.24 NODE_59824_length_277_cov_2.099174_g51884_i0reverse_frame_2 - 0.24 11.6 0.0 0.33 11.1 0.0 1.4 1 1 0 1 1 1 0 Response regulator receiver domain HlyIII PF03006.20 NODE_59820_length_277_cov_2.190083_g51880_i0reverse_frame_2 - 1.4e-20 74.0 2.9 1.5e-20 73.9 2.9 1.0 1 0 0 1 1 1 1 Haemolysin-III related ELP6 PF09807.9 NODE_59817_length_277_cov_2.293388_g51877_i0reverse_frame_2 - 0.099 12.0 0.1 0.17 11.3 0.1 1.4 1 1 0 1 1 1 0 Elongation complex protein 6 LCE PF14672.6 NODE_59817_length_277_cov_2.293388_g51877_i0reverse_frame_2 - 4.7 7.9 7.8 3.9 8.1 0.6 2.1 2 0 0 2 2 2 0 Late cornified envelope DUF2990 PF11693.8 NODE_59812_length_277_cov_2.495868_g51872_i0forward_frame_3 - 0.028 14.6 0.2 0.042 14.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) DUF3410 PF11890.8 NODE_59812_length_277_cov_2.495868_g51872_i0forward_frame_3 - 0.09 12.6 0.3 0.22 11.3 0.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3410) Clathrin-link PF09268.10 NODE_59810_length_277_cov_2.553719_g51870_i0reverse_frame_2 - 0.16 11.4 0.0 0.27 10.6 0.0 1.4 1 0 0 1 1 1 0 Clathrin, heavy-chain linker BPD_transp_1 PF00528.22 NODE_59809_length_277_cov_2.586777_g51869_i0forward_frame_2 - 5.2e-09 36.1 0.5 6.7e-09 35.7 0.5 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CBP_BcsF PF11120.8 NODE_59809_length_277_cov_2.586777_g51869_i0forward_frame_2 - 0.2 11.8 1.5 0.34 11.1 1.5 1.4 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF DUF3464 PF11947.8 NODE_59809_length_277_cov_2.586777_g51869_i0forward_frame_2 - 4.8 6.9 4.8 4.5 7.0 0.2 2.0 1 1 1 2 2 2 0 Photosynthesis affected mutant 68 Vac14_Fig4_bd PF11916.8 NODE_59807_length_277_cov_2.603306_g51867_i0reverse_frame_3 - 0.013 15.1 0.1 0.025 14.2 0.1 1.4 1 1 1 2 2 2 0 Vacuolar protein 14 C-terminal Fig4p binding DHR10 PF18595.1 NODE_59806_length_277_cov_2.723140_g51866_i0reverse_frame_2 - 0.11 12.6 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain Pkinase PF00069.25 NODE_59806_length_277_cov_2.723140_g51866_i0forward_frame_3 - 5.8e-20 71.7 0.0 6.1e-20 71.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_59806_length_277_cov_2.723140_g51866_i0forward_frame_3 - 2.9e-10 39.9 0.0 3e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Herpes_LMP1 PF05297.11 NODE_59804_length_277_cov_2.785124_g51864_i0reverse_frame_2 - 0.18 11.0 3.9 0.18 10.9 3.9 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) SnAC PF14619.6 NODE_59802_length_277_cov_2.966942_g51862_i0reverse_frame_3 - 0.022 15.4 0.1 0.028 15.0 0.1 1.2 1 0 0 1 1 1 0 Snf2-ATP coupling, chromatin remodelling complex Bap31_Bap29_C PF18035.1 NODE_59802_length_277_cov_2.966942_g51862_i0reverse_frame_2 - 0.054 13.5 0.0 0.09 12.8 0.0 1.4 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain FAA_hydro_N_2 PF18288.1 NODE_59802_length_277_cov_2.966942_g51862_i0reverse_frame_2 - 0.11 13.0 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 Fumarylacetoacetase N-terminal domain 2 CBM_19 PF03427.13 NODE_59802_length_277_cov_2.966942_g51862_i0forward_frame_2 - 0.036 14.0 2.2 0.068 13.2 1.9 1.7 1 1 0 1 1 1 0 Carbohydrate binding domain (family 19) DUF3721 PF12518.8 NODE_59801_length_277_cov_2.987603_g51861_i0forward_frame_3 - 0.096 12.6 0.3 0.13 12.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF3552 PF12072.8 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.0008 18.9 0.2 0.001 18.5 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) Vpu PF00558.19 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.001 18.8 0.1 0.0013 18.4 0.1 1.1 1 0 0 1 1 1 1 Vpu protein FAM163 PF15069.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.0013 19.2 0.0 0.0015 19.0 0.0 1.0 1 0 0 1 1 1 1 FAM163 family EphA2_TM PF14575.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.0063 17.4 0.1 0.0074 17.1 0.1 1.1 1 0 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain ATP-synt_E PF05680.12 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.015 15.6 0.0 0.018 15.4 0.0 1.1 1 0 0 1 1 1 0 ATP synthase E chain Amnionless PF14828.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.023 13.6 0.1 0.024 13.5 0.1 1.0 1 0 0 1 1 1 0 Amnionless DUF4834 PF16118.5 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.025 15.5 0.4 0.03 15.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) WBP-1 PF11669.8 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.026 15.1 0.1 0.029 15.0 0.1 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 Shisa PF13908.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.04 14.1 0.1 0.049 13.9 0.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Sigma_reg_N PF13800.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.042 14.1 0.1 0.057 13.7 0.1 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF2852 PF11014.8 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.043 14.0 0.0 0.05 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) Ctr PF04145.15 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.053 14.1 0.0 0.084 13.5 0.0 1.3 1 0 0 1 1 1 0 Ctr copper transporter family Peptidase_M56 PF05569.11 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.058 12.6 0.0 0.062 12.5 0.0 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 OSTbeta PF15048.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.07 13.3 0.0 0.08 13.1 0.0 1.1 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein Chordopox_G3 PF06129.12 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.1 13.3 0.2 0.13 13.0 0.2 1.1 1 0 0 1 1 1 0 Chordopoxvirus G3 protein DUF3439 PF11921.8 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_2 - 0.014 15.4 7.9 0.017 15.1 7.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) RCC1_2 PF13540.6 NODE_59799_length_277_cov_3.648760_g51859_i0forward_frame_3 - 0.00087 19.0 3.3 0.081 12.8 0.1 3.0 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_59799_length_277_cov_3.648760_g51859_i0forward_frame_3 - 0.14 12.6 0.0 5.2 7.6 0.0 2.0 2 0 0 2 2 2 0 Spectrin repeat DUF3095 PF11294.8 NODE_59797_length_277_cov_4.045455_g51857_i0reverse_frame_3 - 0.023 13.8 0.0 0.023 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3095) Orbi_VP7 PF00897.17 NODE_59797_length_277_cov_4.045455_g51857_i0reverse_frame_2 - 0.11 11.5 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Orbivirus inner capsid protein VP7 Peptidase_C50 PF03568.17 NODE_59797_length_277_cov_4.045455_g51857_i0reverse_frame_2 - 0.33 10.0 0.3 0.39 9.8 0.3 1.0 1 0 0 1 1 1 0 Peptidase family C50 ArAE_2_N PF10337.9 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.0087 15.1 0.4 0.0087 15.1 0.4 1.3 1 1 0 1 1 1 1 Putative ER transporter, 6TM, N-terminal DUF3450 PF11932.8 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.014 14.7 7.2 0.016 14.5 7.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) UPF0242 PF06785.11 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.018 15.2 10.0 0.021 14.9 10.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus GAS PF13851.6 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.036 13.4 18.6 0.042 13.2 18.6 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding SlyX PF04102.12 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.089 13.4 1.8 1.3 9.6 0.3 2.2 1 1 1 2 2 2 0 SlyX DUF641 PF04859.12 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.14 12.5 9.2 0.17 12.2 9.2 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) TMF_DNA_bd PF12329.8 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.64 10.1 18.2 1.5 8.8 12.6 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Atg14 PF10186.9 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 1.2 8.1 12.6 1.4 7.9 12.6 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 GrpE PF01025.19 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 2.2 7.9 14.9 3.8 7.2 14.9 1.6 1 1 0 1 1 1 0 GrpE DUF4407 PF14362.6 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 4 6.7 6.7 4.6 6.5 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 7.3 6.4 11.2 13 5.6 7.2 2.3 1 1 1 2 2 2 0 Septum formation initiator TRIQK PF15168.6 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 7.6 6.5 10.4 3.8 7.5 7.3 1.9 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family DEC-1_N PF04625.13 NODE_59786_length_277_cov_43.793388_g51846_i0forward_frame_3 - 2.1 7.3 5.8 2 7.4 5.8 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region TALPID3 PF15324.6 NODE_59786_length_277_cov_43.793388_g51846_i0forward_frame_3 - 2.6 5.6 5.7 2.7 5.6 5.7 1.0 1 0 0 1 1 1 0 Hedgehog signalling target DUF515 PF04415.12 NODE_59779_length_277_cov_51.719008_g51839_i0reverse_frame_3 - 0.43 8.9 7.9 0.44 8.9 7.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) SPK PF04435.18 NODE_59770_length_277_cov_61.421488_g51830_i0reverse_frame_2 - 0.028 14.8 0.7 0.051 14.0 0.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF545) Oxidored_q4 PF00507.19 NODE_59770_length_277_cov_61.421488_g51830_i0forward_frame_3 - 0.1 12.8 2.2 0.12 12.5 2.2 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DUF2576 PF10845.8 NODE_59767_length_277_cov_67.541322_g51827_i0forward_frame_2 - 0.063 12.9 0.1 0.12 12.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) AbiEi_3 PF11459.8 NODE_59763_length_277_cov_71.669421_g51823_i0reverse_frame_2 - 0.073 12.8 0.0 0.078 12.7 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin, Type IV TA system Xpo1 PF08389.12 NODE_59763_length_277_cov_71.669421_g51823_i0reverse_frame_2 - 0.11 12.5 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Exportin 1-like protein GRIP PF01465.20 NODE_59760_length_277_cov_74.929752_g51820_i0reverse_frame_3 - 0.099 12.6 0.2 8 6.5 0.1 2.3 2 0 0 2 2 2 0 GRIP domain RCC1_2 PF13540.6 NODE_59760_length_277_cov_74.929752_g51820_i0reverse_frame_2 - 1e-05 25.2 2.4 0.048 13.5 0.2 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_59760_length_277_cov_74.929752_g51820_i0reverse_frame_2 - 0.046 13.8 0.1 5.8 7.0 0.0 2.0 1 1 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 WW PF00397.26 NODE_59758_length_277_cov_75.884298_g51818_i0forward_frame_2 - 0.033 14.3 0.6 0.033 14.3 0.6 2.3 2 0 0 2 2 2 0 WW domain Sars6 PF12133.8 NODE_59757_length_277_cov_77.747934_g51817_i0forward_frame_3 - 0.039 13.9 0.4 0.065 13.2 0.4 1.3 1 0 0 1 1 1 0 Open reading frame 6 from SARS coronavirus RsgA_N PF16745.5 NODE_59756_length_277_cov_78.144628_g51816_i0reverse_frame_3 - 0.087 12.6 0.4 8.4 6.2 0.4 2.2 2 0 0 2 2 2 0 RsgA N-terminal domain CbeA_antitoxin PF06154.11 NODE_59755_length_277_cov_79.223140_g51815_i0reverse_frame_2 - 0.012 16.1 0.5 0.015 15.9 0.5 1.0 1 0 0 1 1 1 0 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ABC_membrane PF00664.23 NODE_59753_length_277_cov_82.487603_g51813_i0forward_frame_3 - 0.013 15.1 0.6 0.015 15.0 0.6 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region DUF4883 PF16224.5 NODE_59750_length_277_cov_84.285124_g51810_i0forward_frame_3 - 0.17 12.2 6.2 0.2 11.9 6.2 1.1 1 0 0 1 1 1 0 DOmain of unknown function (DUF4883) YmcE_antitoxin PF15939.5 NODE_59749_length_277_cov_85.628099_g51809_i0reverse_frame_3 - 0.17 12.1 4.1 0.24 11.6 4.1 1.4 1 1 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system Herpes_LMP1 PF05297.11 NODE_59749_length_277_cov_85.628099_g51809_i0reverse_frame_3 - 9 5.4 8.4 10 5.2 8.4 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) zf-C2HC_2 PF13913.6 NODE_59746_length_277_cov_99.066116_g51806_i0forward_frame_3 - 0.00074 19.3 0.7 0.0011 18.8 0.7 1.3 1 0 0 1 1 1 1 zinc-finger of a C2HC-type zf-Paramyx-P PF13008.7 NODE_59746_length_277_cov_99.066116_g51806_i0forward_frame_3 - 0.098 12.1 0.4 0.17 11.3 0.4 1.4 1 0 0 1 1 1 0 Zinc-binding domain of Paramyxoviridae V protein DUF5367 PF17329.2 NODE_59744_length_277_cov_107.896694_g51804_i0forward_frame_3 - 0.0025 17.9 3.4 0.0034 17.5 3.0 1.4 1 1 1 2 2 2 1 Family of unknown function (DUF5367) DUF2061 PF09834.9 NODE_59744_length_277_cov_107.896694_g51804_i0forward_frame_3 - 0.14 12.7 3.2 0.79 10.3 3.2 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2061) UPF0542 PF15086.6 NODE_59744_length_277_cov_107.896694_g51804_i0forward_frame_3 - 1.5 8.8 7.6 3.3 7.7 1.8 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0542 GlgX_C PF18390.1 NODE_59743_length_277_cov_108.388430_g51803_i0reverse_frame_2 - 0.059 13.2 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Glycogen debranching enzyme C-terminal domain DUF2733 PF10813.8 NODE_59742_length_277_cov_127.355372_g51802_i0forward_frame_3 - 0.044 13.5 0.0 0.065 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) MORN PF02493.20 NODE_59737_length_277_cov_180.103306_g51797_i0reverse_frame_2 - 1.6 8.8 8.2 0.73 9.8 0.3 2.8 3 0 0 3 3 3 0 MORN repeat Chloroa_b-bind PF00504.21 NODE_59736_length_277_cov_187.938017_g51796_i0reverse_frame_3 - 0.093 13.3 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 Chlorophyll A-B binding protein DUF2897 PF11446.8 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.0031 17.3 0.1 0.0066 16.3 0.1 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF2897) Phage_Gp23 PF10669.9 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.016 15.5 0.2 0.02 15.2 0.2 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) LapA_dom PF06305.11 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.023 14.5 0.9 0.051 13.4 0.9 1.6 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain O-antigen_lig PF13425.6 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.11 11.3 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Connexin PF00029.19 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.12 12.2 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Connexin Otopetrin PF03189.13 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.19 10.5 0.0 0.2 10.4 0.0 1.0 1 0 0 1 1 1 0 Otopetrin Tmemb_161AB PF10268.9 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.22 10.2 0.3 0.25 9.9 0.3 1.1 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB SHR3_chaperone PF08229.11 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 4.5 6.2 4.5 7.5 5.5 4.4 1.5 1 1 0 1 1 1 0 ER membrane protein SH3 SCAMP PF04144.13 NODE_59731_length_277_cov_248.859504_g51791_i0reverse_frame_2 - 0.0058 17.0 0.6 0.0075 16.6 0.6 1.2 1 0 0 1 1 1 1 SCAMP family Phe_ZIP PF08916.11 NODE_59728_length_277_cov_277.504132_g51788_i0reverse_frame_2 - 0.01 16.5 4.0 2.1 9.1 0.4 2.2 2 0 0 2 2 2 0 Phenylalanine zipper RCC1_2 PF13540.6 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_3 - 6.9e-07 28.9 0.6 0.0052 16.6 0.1 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_3 - 0.094 12.8 0.1 7.1 6.7 0.0 2.1 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 GST_C_2 PF13410.6 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_3 - 0.096 12.7 0.0 4.9 7.2 0.0 2.2 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Peptidase_C36 PF05415.11 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_3 - 0.14 12.4 0.0 0.32 11.2 0.0 1.6 1 1 1 2 2 2 0 Beet necrotic yellow vein furovirus-type papain-like endopeptidase Coronavirus_5 PF05528.11 NODE_59719_length_277_cov_6841.731405_g51779_i0forward_frame_2 - 0.11 12.5 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Coronavirus gene 5 protein LrgA PF03788.14 NODE_59718_length_277_cov_63829.268595_g51778_i0reverse_frame_3 - 0.13 12.3 5.0 0.61 10.1 5.0 2.0 1 1 0 1 1 1 0 LrgA family Rieske_3 PF18465.1 NODE_59718_length_277_cov_63829.268595_g51778_i0forward_frame_3 - 0.012 15.9 0.1 0.014 15.6 0.1 1.2 1 0 0 1 1 1 0 Rieske 3Fe-4S DUF1959 PF09218.10 NODE_59710_length_278_cov_1.189300_g51770_i0forward_frame_2 - 0.081 13.0 0.1 0.14 12.3 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1959) HET PF06985.11 NODE_59710_length_278_cov_1.189300_g51770_i0forward_frame_2 - 0.09 13.1 0.1 0.11 12.8 0.1 1.2 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) SLATT_1 PF18181.1 NODE_59708_length_278_cov_1.242798_g51768_i0reverse_frame_3 - 0.18 11.7 0.0 0.26 11.2 0.0 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 DUF1182 PF06681.13 NODE_59707_length_278_cov_1.251029_g51767_i0reverse_frame_3 - 0.048 13.2 7.0 0.06 12.9 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1182) CbiQ PF02361.16 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 0.015 15.0 3.5 0.017 14.7 3.5 1.0 1 0 0 1 1 1 0 Cobalt transport protein CPP1-like PF11833.8 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 0.23 11.1 4.0 0.3 10.7 4.0 1.2 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like CytochromB561_N PF09786.9 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 0.5 9.3 1.2 0.54 9.2 1.2 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal Tic110 PF16940.5 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 1.5 7.2 11.1 1.7 7.0 11.1 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter DUF2207 PF09972.9 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 1.7 7.3 3.8 2.1 7.0 3.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3487 PF11990.8 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 2.2 8.2 6.1 2.7 7.9 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) ABC2_membrane_2 PF12679.7 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 2.7 7.2 11.7 3.2 7.0 11.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein SLATT_1 PF18181.1 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 4.3 7.3 8.0 5.2 7.0 8.0 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 DUF3040 PF11239.8 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.0034 17.6 0.1 0.004 17.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3040) DUF5345 PF17280.2 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.063 13.3 9.3 0.05 13.6 7.7 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5345) MCU PF04678.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.07 13.2 5.4 0.079 13.1 5.4 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter DUF2368 PF10166.9 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.1 12.2 8.8 0.12 12.0 8.8 1.2 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2368) Pex14_N PF04695.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.29 11.8 13.0 0.33 11.6 13.0 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Presenilin PF01080.17 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 1 8.1 7.4 1.1 7.9 7.4 1.0 1 0 0 1 1 1 0 Presenilin Sec62 PF03839.16 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 1.7 8.1 8.5 2 7.9 8.5 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 TFIIA PF03153.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 4.2 7.3 24.0 4.5 7.2 24.0 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF4407 PF14362.6 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 4.3 6.6 9.6 5 6.4 9.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ALMT PF11744.8 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 9.7 4.9 7.1 12 4.6 7.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Ctr PF04145.15 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 9.9 6.8 7.0 12 6.5 7.0 1.1 1 0 0 1 1 1 0 Ctr copper transporter family Mucin PF01456.17 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 0.3 11.1 33.0 0.36 10.8 33.0 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein MGC-24 PF05283.11 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 0.45 11.0 14.7 0.55 10.7 14.7 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Adeno_PV PF03910.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 1.7 7.3 11.7 1.9 7.1 11.7 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV MelC1 PF06236.11 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 2.8 8.0 13.6 3.8 7.6 13.6 1.2 1 0 0 1 1 1 0 Tyrosinase co-factor MelC1 RIFIN PF02009.16 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 3.1 7.6 8.2 3.6 7.4 8.2 1.0 1 0 0 1 1 1 0 Rifin NUDE_C PF04880.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 4.1 7.8 7.3 4.8 7.6 7.3 1.0 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Herpes_UL74 PF07982.12 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 4.7 6.1 13.5 5.4 5.9 13.5 1.0 1 0 0 1 1 1 0 Herpes UL74 glycoproteins FSA_C PF10479.9 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 7.8 4.5 14.5 8.3 4.4 14.5 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus ChiC PF06483.11 NODE_59699_length_278_cov_1.419753_g51759_i0forward_frame_2 - 0.0013 18.7 0.1 0.0014 18.6 0.1 1.0 1 0 0 1 1 1 1 Chitinase C TPR_12 PF13424.6 NODE_59694_length_278_cov_1.514403_g51754_i0forward_frame_2 - 6e-08 32.9 0.0 1.6e-05 25.1 0.0 2.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_59694_length_278_cov_1.514403_g51754_i0forward_frame_2 - 0.0031 17.3 0.3 0.0053 16.5 0.3 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_59694_length_278_cov_1.514403_g51754_i0forward_frame_2 - 0.052 13.8 0.6 0.14 12.4 0.2 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_59694_length_278_cov_1.514403_g51754_i0forward_frame_2 - 0.06 13.5 0.1 0.12 12.5 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat IL11 PF07400.11 NODE_59693_length_278_cov_1.543210_g51753_i0reverse_frame_2 - 0.045 13.4 0.6 0.053 13.2 0.6 1.1 1 0 0 1 1 1 0 Interleukin 11 Methyltransf_4 PF02390.17 NODE_59692_length_278_cov_1.555556_g51752_i0reverse_frame_2 - 0.032 13.7 0.1 0.037 13.5 0.1 1.1 1 0 0 1 1 1 0 Putative methyltransferase DUF1501 PF07394.12 NODE_59692_length_278_cov_1.555556_g51752_i0reverse_frame_2 - 0.064 12.3 0.1 0.073 12.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) LTP_2 PF14368.6 NODE_59691_length_278_cov_1.580247_g51751_i0reverse_frame_2 - 0.076 13.1 0.1 0.097 12.8 0.1 1.3 1 0 0 1 1 1 0 Probable lipid transfer CreD PF06123.12 NODE_59690_length_278_cov_1.588477_g51750_i0reverse_frame_3 - 0.31 9.8 3.9 0.37 9.5 3.9 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD LNP1 PF15419.6 NODE_59689_length_278_cov_1.592593_g51749_i0reverse_frame_2 - 0.0095 16.2 0.9 0.01 16.1 0.9 1.1 1 0 0 1 1 1 1 Leukemia NUP98 fusion partner 1 DnaI_N PF07319.11 NODE_59686_length_278_cov_1.654321_g51746_i0forward_frame_2 - 0.0089 16.7 6.1 0.01 16.5 6.1 1.1 1 0 0 1 1 1 1 Primosomal protein DnaI N-terminus Exonuc_VII_L PF02601.15 NODE_59686_length_278_cov_1.654321_g51746_i0forward_frame_2 - 0.15 11.6 4.0 0.17 11.5 4.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Zn_ribbon_17 PF17120.5 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 2.2e-06 27.2 3.4 3.1e-06 26.7 3.4 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_2 PF13639.6 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.00018 21.8 4.5 0.00035 20.9 4.5 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.00021 21.2 1.5 0.0004 20.3 1.4 1.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.0006 19.7 4.1 0.0006 19.7 4.1 1.6 2 0 0 2 2 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.0035 17.6 2.7 0.0058 16.9 2.7 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.0043 16.9 5.1 0.01 15.7 5.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.0054 16.6 4.5 0.01 15.7 4.5 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_6 PF14835.6 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.015 15.1 0.6 0.022 14.6 0.6 1.2 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-C3HC4_2 PF13923.6 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.023 14.5 4.9 0.053 13.4 4.9 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zf_RING PF16744.5 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.094 12.8 4.2 0.13 12.4 4.2 1.2 1 0 0 1 1 1 0 KIAA1045 RING finger zf-RING_11 PF17123.5 NODE_59685_length_278_cov_1.679012_g51745_i0forward_frame_2 - 0.12 12.1 3.6 0.22 11.3 3.6 1.5 1 0 0 1 1 1 0 RING-like zinc finger UCH PF00443.29 NODE_59680_length_278_cov_1.740741_g51740_i0forward_frame_3 - 5e-06 26.2 0.0 5.5e-06 26.1 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Ogr_Delta PF04606.12 NODE_59679_length_278_cov_1.748971_g51739_i0forward_frame_3 - 0.023 14.7 0.5 0.023 14.7 0.5 1.7 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks259.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks259.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks259.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks259.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_1 PF07690.16 NODE_12488_length_1250_cov_2.364609_g9328_i0reverse_frame_1 - 2.3e-31 109.0 25.8 3.4e-31 108.5 25.8 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_12488_length_1250_cov_2.364609_g9328_i0reverse_frame_1 - 8e-09 34.9 15.4 1.1e-08 34.3 15.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_3 PF05977.13 NODE_12488_length_1250_cov_2.364609_g9328_i0reverse_frame_1 - 0.00082 17.9 11.6 0.0011 17.5 11.6 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector Solute_trans_a PF03619.16 ORF90456 - 1.4e-12 47.8 1.0 1.4e-12 47.8 1.0 1.7 2 0 0 2 2 2 1 Organic solute transporter Ostalpha Dynamin_M PF01031.20 ORF87475 - 0.00084 18.6 1.1 0.0015 17.9 1.1 1.3 1 0 0 1 1 1 1 Dynamin central region CLASP_N PF12348.8 ORF87475 - 0.015 14.9 0.1 0.026 14.1 0.1 1.3 1 0 0 1 1 1 0 CLASP N terminal DUF2207 PF09972.9 ORF84814 - 0.07 11.9 2.3 0.19 10.5 2.3 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF84814 - 0.073 13.4 7.3 1.2 9.4 3.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) COX2_TM PF02790.15 ORF84814 - 2.1 8.6 6.0 39 4.5 0.1 3.3 3 0 0 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane domain Asp PF00026.23 ORF84512 - 2.4e-45 155.3 12.3 3.2e-45 154.9 12.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF84512 - 3.2e-06 27.5 9.5 0.00024 21.4 0.4 3.0 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF84512 - 0.0078 16.0 0.0 0.015 15.1 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF84512 - 0.024 15.3 0.3 3.7 8.3 0.1 2.9 2 1 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 ORF84512 - 0.057 14.0 0.1 6 7.5 0.0 3.5 3 1 0 3 3 3 0 gag-polyprotein putative aspartyl protease DJ-1_PfpI PF01965.24 ORF79834 - 6.1e-36 123.7 0.0 1.5e-17 63.9 0.0 2.1 2 0 0 2 2 2 2 DJ-1/PfpI family GATase_3 PF07685.14 ORF79834 - 6e-05 22.7 0.0 0.12 11.9 0.0 2.2 2 0 0 2 2 2 2 CobB/CobQ-like glutamine amidotransferase domain GATase_5 PF13507.6 ORF79834 - 0.026 13.6 0.0 2.2 7.3 0.0 2.2 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 ORF79834 - 0.039 13.8 0.1 4 7.2 0.0 2.2 2 0 0 2 2 2 0 SNO glutamine amidotransferase family GATase PF00117.28 ORF79834 - 0.08 12.7 0.0 4.5 7.0 0.0 2.2 2 0 0 2 2 2 0 Glutamine amidotransferase class-I LRR_4 PF12799.7 ORF78154 - 1.3e-09 38.2 12.3 0.0023 18.3 0.3 6.7 6 2 0 6 6 6 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF78154 - 1.1e-07 31.5 14.5 2.9 7.7 0.1 7.9 6 3 1 7 7 7 4 Leucine rich repeat LRR_1 PF00560.33 ORF78154 - 3e-07 30.0 10.9 9 7.3 0.0 7.1 7 0 0 7 7 7 4 Leucine Rich Repeat LRR_6 PF13516.6 ORF78154 - 8.2e-07 28.6 14.5 0.57 10.4 0.0 7.7 8 0 0 8 8 8 2 Leucine Rich repeat Sec1 PF00995.23 ORF67787 - 2.8e-53 182.0 0.0 3.2e-53 181.9 0.0 1.0 1 0 0 1 1 1 1 Sec1 family DUF2207 PF09972.9 ORF6592 - 0.07 11.9 2.3 0.19 10.5 2.3 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF6592 - 0.073 13.4 7.3 1.2 9.4 3.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) COX2_TM PF02790.15 ORF6592 - 2.1 8.6 6.0 39 4.5 0.1 3.3 3 0 0 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane domain CNOT1_TTP_bind PF16417.5 ORF45027 - 4.2e-20 71.7 0.0 7.7e-20 70.9 0.0 1.4 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain Asp PF00026.23 ORF42673 - 2.4e-45 155.3 12.3 3.2e-45 154.9 12.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF42673 - 3.2e-06 27.5 9.5 0.00024 21.4 0.4 3.0 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF42673 - 0.0078 16.0 0.0 0.015 15.1 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF42673 - 0.024 15.3 0.3 3.7 8.3 0.1 2.9 2 1 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 ORF42673 - 0.057 14.0 0.1 6 7.5 0.0 3.5 3 1 0 3 3 3 0 gag-polyprotein putative aspartyl protease Metallophos PF00149.28 ORF4210 - 6.8e-06 26.7 0.1 1.9e-05 25.2 0.1 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF4210 - 2e-05 24.8 0.1 0.084 13.1 0.0 2.2 2 0 0 2 2 2 2 Calcineurin-like phosphoesterase superfamily domain Actin PF00022.19 ORF35746 - 1.8e-86 290.3 0.0 3.5e-84 282.8 0.0 2.0 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF35746 - 0.0067 15.3 0.0 0.67 8.7 0.0 2.2 2 0 0 2 2 2 2 MreB/Mbl protein zf-C3Hc3H PF13891.6 ORF35746 - 0.015 15.7 0.1 0.033 14.6 0.1 1.6 1 0 0 1 1 1 0 Potential DNA-binding domain TPR_12 PF13424.6 ORF34751 - 2.9e-12 46.7 3.0 1.5e-06 28.4 0.1 3.8 2 1 3 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF34751 - 5.3e-09 35.6 1.3 0.0066 16.6 0.2 4.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF34751 - 3e-06 26.8 12.9 0.0066 16.2 0.2 5.3 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF34751 - 7.9e-06 25.5 0.7 0.065 13.3 0.0 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF34751 - 0.0002 21.2 4.0 0.031 14.4 0.1 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat DUF410 PF04190.13 ORF34751 - 0.0086 15.9 0.8 0.014 15.2 0.2 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF410) TPR_14 PF13428.6 ORF34751 - 0.013 16.3 0.0 15 6.7 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF34751 - 0.061 14.0 0.0 0.39 11.4 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat ArnB_C PF18677.1 ORF34751 - 0.069 13.3 1.6 0.12 12.5 0.1 2.2 2 1 1 3 3 2 0 Archaellum regulatory network B, C-terminal domain UCH_1 PF13423.6 ORF34751 - 0.076 12.6 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase SURF2 PF05477.11 ORF34751 - 0.11 12.1 3.8 0.21 11.2 3.8 1.4 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) TPR_10 PF13374.6 ORF34751 - 0.12 12.3 0.3 71 3.5 0.0 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF34751 - 0.4 11.2 3.7 49 4.6 0.0 4.7 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF34751 - 0.47 11.2 2.8 2.1 9.2 0.1 3.3 4 1 1 5 5 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF34751 - 1.8 8.3 7.9 2.9 7.7 0.1 4.5 4 2 1 5 5 5 0 TPR repeat DUF2207 PF09972.9 ORF3006 - 0.07 11.9 2.3 0.19 10.5 2.3 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF3006 - 0.073 13.4 7.3 1.2 9.4 3.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) COX2_TM PF02790.15 ORF3006 - 2.1 8.6 6.0 39 4.5 0.1 3.3 3 0 0 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane domain AAA_28 PF13521.6 ORF1564 - 5.1e-29 101.6 0.0 7.5e-29 101.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain HTH_3 PF01381.22 ORF1564 - 1.7e-09 37.6 0.1 5.9e-09 35.9 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 ORF1564 - 6.4e-07 29.6 0.0 1.4e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 ORF1564 - 1.8e-05 24.6 0.0 7.8e-05 22.6 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Citrate_ly_lig PF08218.11 ORF1564 - 0.00072 19.3 0.0 0.022 14.5 0.0 2.6 3 0 0 3 3 3 1 Citrate lyase ligase C-terminal domain HTH_26 PF13443.6 ORF1564 - 0.0011 19.3 0.0 0.0049 17.3 0.0 2.0 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain CTP_transf_like PF01467.26 ORF1564 - 0.0015 18.7 0.1 0.017 15.3 0.0 2.3 2 0 0 2 2 2 1 Cytidylyltransferase-like MMR_HSR1 PF01926.23 ORF1564 - 0.023 14.8 0.3 0.049 13.7 0.3 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase FAD_syn PF06574.12 ORF1564 - 0.037 13.9 0.0 0.23 11.4 0.0 2.3 2 0 0 2 2 2 0 FAD synthetase HTH_37 PF13744.6 ORF1564 - 0.042 13.8 0.1 0.081 12.9 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain ABC_tran PF00005.27 ORF1564 - 0.046 14.2 0.0 0.41 11.2 0.0 2.2 2 0 0 2 2 2 0 ABC transporter AAA_29 PF13555.6 ORF1564 - 0.095 12.5 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Dynamin_N PF00350.23 ORF1564 - 0.2 11.7 0.4 0.41 10.7 0.4 1.5 1 0 0 1 1 1 0 Dynamin family Ank_2 PF12796.7 ORF14058 - 1.3e-15 57.7 0.0 2.4e-15 56.9 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF14058 - 1.4e-13 51.1 0.0 2.6e-06 27.9 0.0 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF14058 - 1.7e-13 49.4 0.0 2.1e-05 24.6 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF14058 - 1.7e-12 47.3 0.0 3.6e-06 27.1 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_1 PF00583.25 ORF14058 - 1.8e-09 37.9 0.0 3.7e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Ank PF00023.30 ORF14058 - 2.4e-09 37.2 0.0 0.00026 21.3 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Acetyltransf_10 PF13673.7 ORF14058 - 7.3e-09 35.6 0.0 1.4e-08 34.7 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF14058 - 2.3e-07 31.1 0.0 5.2e-07 30.0 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF14058 - 4.4e-06 26.6 0.0 1e-05 25.4 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 ORF14058 - 0.0032 17.6 0.1 0.0063 16.6 0.1 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 ORF14058 - 0.0042 17.8 0.0 0.015 16.0 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Solute_trans_a PF03619.16 ORF12386 - 1.4e-12 47.8 1.0 1.4e-12 47.8 1.0 1.7 2 0 0 2 2 2 1 Organic solute transporter Ostalpha DNA_methylase PF00145.17 ORF12170 - 0.00062 19.2 0.0 0.00083 18.8 0.0 1.3 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase PPTA PF01239.22 ORF10228 - 5.1e-05 22.9 0.7 0.00057 19.5 0.3 2.3 2 0 0 2 2 2 1 Protein prenyltransferase alpha subunit repeat LRR_4 PF12799.7 ORF10228 - 0.0022 18.4 0.0 1 9.9 0.0 3.1 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF10228 - 0.0044 16.7 0.4 0.026 14.3 0.2 2.5 2 1 0 2 2 2 1 Leucine rich repeat UNC45-central PF11701.8 ORF10228 - 0.15 12.0 0.1 0.24 11.3 0.1 1.2 1 0 0 1 1 1 0 Myosin-binding striated muscle assembly central Glyco_hydro_31 PF01055.26 NODE_12576_length_1246_cov_198.126342_g9401_i0reverse_frame_1 - 7.1e-56 190.3 2.3 1.1e-55 189.7 2.3 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 CHAT PF12770.7 NODE_12512_length_1249_cov_21.950577_g9349_i0reverse_frame_3 - 3.2e-10 39.9 0.0 4.9e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 CHAT domain Fe_dep_repr_C PF02742.15 NODE_12512_length_1249_cov_21.950577_g9349_i0reverse_frame_3 - 0.025 14.6 0.1 0.06 13.4 0.1 1.6 1 0 0 1 1 1 0 Iron dependent repressor, metal binding and dimerisation domain DUF4258 PF14076.6 NODE_12512_length_1249_cov_21.950577_g9349_i0reverse_frame_3 - 0.066 13.6 0.2 5 7.6 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4258) HTH_IclR PF09339.10 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 1.4e-13 50.4 0.3 4.7e-13 48.7 0.0 2.1 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_24 PF13412.6 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.00011 21.6 0.0 0.00038 20.0 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.001 18.9 0.9 0.0022 17.9 0.1 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.0023 17.8 0.0 0.0039 17.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.0032 17.4 0.0 0.0065 16.4 0.0 1.5 1 0 0 1 1 1 1 HTH domain HTH_45 PF14947.6 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.0084 16.1 0.1 0.067 13.2 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix MarR PF01047.22 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.012 15.6 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 MarR family Mga PF05043.13 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.014 16.0 0.1 0.034 14.7 0.0 1.7 2 0 0 2 2 1 0 Mga helix-turn-helix domain MarR_2 PF12802.7 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.015 15.1 0.0 0.06 13.2 0.0 2.0 1 0 0 1 1 1 0 MarR family Fe_dep_repress PF01325.19 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.017 15.3 0.2 0.035 14.3 0.2 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_26 PF13443.6 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.018 15.5 0.6 1 9.8 0.1 2.3 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Rrf2 PF02082.20 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.018 15.4 0.1 0.041 14.2 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator FUR PF01475.19 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.022 14.9 0.0 0.052 13.7 0.0 1.7 1 0 0 1 1 1 0 Ferric uptake regulator family HTH_6 PF01418.17 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.036 14.0 0.0 0.07 13.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family PadR PF03551.14 NODE_12488_length_1250_cov_2.364609_g9328_i0forward_frame_2 - 0.091 12.7 0.1 0.31 11.0 0.1 1.9 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DUF599 PF04654.12 NODE_12448_length_1251_cov_189.714638_g4197_i1reverse_frame_3 - 0.059 12.8 0.3 0.098 12.1 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF599 Iso_dh PF00180.20 ORF9360 - 7.9e-81 271.9 0.0 9.1e-81 271.7 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Pkinase PF00069.25 ORF8698 - 8.1e-45 153.2 0.0 1e-44 152.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF8698 - 2.2e-30 105.8 0.0 2.9e-30 105.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF8698 - 0.0022 16.8 0.0 0.0033 16.3 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase EF-hand_7 PF13499.6 ORF8698 - 0.0025 18.2 0.0 0.0059 17.0 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF8698 - 0.0054 16.2 0.0 0.011 15.2 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF8698 - 0.019 14.9 0.0 0.046 13.7 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain WD40 PF00400.32 ORF80810 - 1.1e-33 114.7 15.0 1.7e-08 35.0 0.1 7.3 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF80810 - 2.8e-10 40.3 1.7 7.7e-05 22.9 0.1 3.9 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF80810 - 0.0069 15.4 0.2 0.58 9.1 0.0 2.9 2 1 0 3 3 3 1 WD40 region of Ge1, enhancer of mRNA-decapping protein BTB PF00651.31 ORF75483 - 7.6e-13 48.7 0.0 1.9e-12 47.4 0.0 1.6 1 0 0 1 1 1 1 BTB/POZ domain Peptidase_C13 PF01650.18 ORF74645 - 1.9e-103 345.5 0.4 3.1e-103 344.8 0.4 1.3 1 0 0 1 1 1 1 Peptidase C13 family DUF4180 PF13788.6 ORF74645 - 0.11 12.4 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4180) MFS_1 PF07690.16 ORF69985 - 2.1e-26 92.7 23.6 3.2e-26 92.1 23.6 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF69985 - 0.0026 16.7 7.6 0.0026 16.7 7.6 2.7 2 1 0 2 2 2 1 Sugar (and other) transporter COX5B PF01215.19 ORF68316 - 1.7e-06 27.7 0.0 2.8e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Cytochrome c oxidase subunit Vb DUF3748 PF12566.8 ORF61920 - 7.5e-57 190.6 4.7 1.4e-55 186.5 1.0 3.5 4 0 0 4 4 4 1 Protein of unknown function (DUF3748) PD40 PF07676.12 ORF61920 - 3.8e-05 23.5 1.9 0.1 12.6 0.1 4.1 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 ORF61920 - 7.6e-05 21.6 0.2 0.68 8.6 0.0 4.0 3 2 1 5 5 5 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region Proteasome_A_N PF10584.9 ORF61920 - 0.097 12.4 0.9 25 4.7 0.0 3.4 3 0 0 3 3 3 0 Proteasome subunit A N-terminal signature WD40 PF00400.32 ORF61920 - 0.58 11.1 5.3 47 5.1 0.1 4.0 3 1 1 4 4 4 0 WD domain, G-beta repeat PNK3P PF08645.11 ORF59022 - 3.4e-57 192.7 0.5 3.4e-57 192.7 0.5 1.9 2 0 0 2 2 2 1 Polynucleotide kinase 3 phosphatase AAA_33 PF13671.6 ORF59022 - 3.2e-19 69.5 0.1 2.7e-16 60.0 0.0 2.8 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 ORF59022 - 3e-06 26.6 0.2 0.018 14.3 0.0 2.4 1 1 1 2 2 2 2 Zeta toxin ABC_tran PF00005.27 ORF59022 - 0.0033 17.9 0.0 0.0072 16.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF59022 - 0.004 16.9 0.0 0.19 11.5 0.0 2.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF59022 - 0.0092 16.1 0.9 0.092 12.8 0.1 2.8 2 2 0 2 2 2 1 50S ribosome-binding GTPase RNA_helicase PF00910.22 ORF59022 - 0.017 15.5 0.3 0.75 10.2 0.1 2.6 2 0 0 2 2 2 0 RNA helicase PGP_phosphatase PF09419.10 ORF59022 - 0.017 14.7 0.7 0.16 11.6 0.0 2.4 2 1 1 3 3 3 0 Mitochondrial PGP phosphatase AAA_25 PF13481.6 ORF59022 - 0.075 12.6 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Ploopntkinase3 PF18751.1 ORF59022 - 0.081 12.8 0.0 0.22 11.4 0.0 1.8 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 RsgA_GTPase PF03193.16 ORF59022 - 0.13 12.2 0.1 0.6 10.0 0.0 2.0 2 1 0 2 2 2 0 RsgA GTPase Peptidase_S15 PF02129.18 ORF55284 - 8.2e-05 22.3 0.0 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) DUF818 PF05677.12 ORF55284 - 0.00096 18.2 0.1 0.0016 17.5 0.1 1.3 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Abhydrolase_1 PF00561.20 ORF55284 - 0.0026 17.4 0.0 0.005 16.5 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF55284 - 0.0031 16.8 0.0 0.0072 15.6 0.0 1.6 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Mlh1_C PF16413.5 ORF55284 - 0.042 13.2 0.0 0.072 12.5 0.0 1.3 1 0 0 1 1 1 0 DNA mismatch repair protein Mlh1 C-terminus BAAT_C PF08840.11 ORF55284 - 0.046 13.6 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_6 PF12697.7 ORF55284 - 0.11 13.1 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF2666 PF10869.8 ORF52143 - 0.021 15.0 2.5 0.072 13.3 2.5 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) GIDA PF01134.22 ORF52143 - 2.8 6.9 8.1 1.3 8.0 2.0 2.3 1 1 0 2 2 2 0 Glucose inhibited division protein A FWWh PF14922.6 ORF51359 - 5.2e-33 114.1 0.5 9.5e-33 113.2 0.5 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF5339 PF17274.2 ORF51359 - 0.013 16.4 2.0 0.03 15.2 2.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5339) GBP_C PF02841.14 ORF51359 - 0.034 13.6 5.2 0.049 13.0 5.2 1.2 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF1843 PF08898.10 ORF51359 - 0.22 12.0 2.4 0.25 11.9 0.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1843) MFS_1 PF07690.16 ORF4819 - 2.2e-24 86.0 60.2 1.2e-15 57.3 26.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF4819 - 2.2e-20 72.6 33.9 2.9e-20 72.2 33.9 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector PTR2 PF00854.21 ORF4819 - 0.082 11.7 6.1 2.1 7.1 0.1 2.3 2 0 0 2 2 2 0 POT family Peptidase_S15 PF02129.18 ORF36638 - 8.2e-05 22.3 0.0 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) DUF818 PF05677.12 ORF36638 - 0.00096 18.2 0.1 0.0016 17.5 0.1 1.3 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Abhydrolase_1 PF00561.20 ORF36638 - 0.0026 17.4 0.0 0.005 16.5 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF36638 - 0.0031 16.8 0.0 0.0072 15.6 0.0 1.6 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Mlh1_C PF16413.5 ORF36638 - 0.042 13.2 0.0 0.072 12.5 0.0 1.3 1 0 0 1 1 1 0 DNA mismatch repair protein Mlh1 C-terminus BAAT_C PF08840.11 ORF36638 - 0.046 13.6 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_6 PF12697.7 ORF36638 - 0.11 13.1 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family EF-hand_6 PF13405.6 ORF31960 - 2.4e-20 70.7 3.2 4.1e-06 26.3 0.1 3.6 3 0 0 3 3 3 3 EF-hand domain EF-hand_1 PF00036.32 ORF31960 - 8.2e-20 68.8 0.8 1.7e-06 27.2 0.1 3.5 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF31960 - 5.3e-18 65.2 0.2 7.6e-12 45.5 0.0 2.9 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF31960 - 1.3e-12 46.5 2.2 1.6e-05 24.1 0.1 3.5 3 0 0 3 3 3 2 EF hand Exo_endo_phos PF03372.23 ORF31960 - 5.1e-12 45.8 0.2 2.7e-11 43.4 0.2 2.0 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family EF-hand_8 PF13833.6 ORF31960 - 6.3e-12 45.1 0.0 1.5e-05 24.8 0.0 3.6 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF31960 - 0.00035 20.8 0.0 0.33 11.3 0.0 3.1 2 1 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF31960 - 0.00082 19.3 0.3 1 9.4 0.0 3.9 4 0 0 4 4 4 1 Cytoskeletal-regulatory complex EF hand Aldedh PF00171.22 ORF29715 - 6.8e-116 387.5 0.0 8.4e-116 387.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 ORF29715 - 0.015 14.4 0.0 0.029 13.4 0.0 1.5 1 1 0 1 1 1 0 Acyl-CoA reductase (LuxC) DUF1487 PF07368.11 ORF29715 - 0.14 11.6 0.0 0.25 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) Methyltransf_21 PF05050.12 ORF22536 - 0.076 13.0 0.0 0.21 11.6 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase FkbM domain Bestrophin PF01062.21 ORF16828 - 2.9e-29 102.4 0.5 4.3e-29 101.8 0.5 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF2919 PF11143.8 ORF16828 - 0.016 15.6 0.5 0.039 14.3 0.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2919) DEAD PF00270.29 ORF15744 - 1.1e-38 132.8 0.1 1.6e-38 132.2 0.1 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF15744 - 8.8e-30 103.3 0.4 5.2e-28 97.6 0.1 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain CMS1 PF14617.6 ORF15744 - 4.7e-05 22.9 0.0 8.3e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit Thioredoxin_6 PF13848.6 ORF15744 - 0.0028 17.6 0.2 0.0075 16.2 0.2 1.8 1 0 0 1 1 1 1 Thioredoxin-like domain Titin_Ig-rpts PF06582.12 ORF108296 - 0.72 9.8 4.5 1.6 8.7 0.1 2.7 2 0 0 2 2 2 0 Titin repeat Prominin PF05478.11 ORF108296 - 0.85 7.5 6.3 1.4 6.8 6.3 1.2 1 0 0 1 1 1 0 Prominin LCD1 PF09798.9 ORF108296 - 2.2 6.7 10.8 2.7 6.4 10.8 1.2 1 0 0 1 1 1 0 DNA damage checkpoint protein DUF4795 PF16043.5 ORF108296 - 6.9 6.2 27.4 0.58 9.7 13.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) DEAD PF00270.29 ORF104746 - 1.1e-38 132.8 0.1 1.6e-38 132.2 0.1 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF104746 - 8.8e-30 103.3 0.4 5.2e-28 97.6 0.1 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain CMS1 PF14617.6 ORF104746 - 4.7e-05 22.9 0.0 8.3e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit Thioredoxin_6 PF13848.6 ORF104746 - 0.0028 17.6 0.2 0.0075 16.2 0.2 1.8 1 0 0 1 1 1 1 Thioredoxin-like domain Ion_trans PF00520.31 ORF101416 - 2.7e-17 62.8 13.3 4.1e-17 62.2 13.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF101416 - 0.0015 18.3 0.4 0.0051 16.6 0.4 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF101416 - 0.0065 16.9 0.1 0.014 15.8 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_10 PF14788.6 ORF101416 - 0.15 12.0 0.1 0.31 10.9 0.1 1.5 1 0 0 1 1 1 0 EF hand Sad1_UNC PF07738.13 NODE_12642_length_1243_cov_82.196192_g9455_i0reverse_frame_1 - 4.1e-06 26.8 0.3 1e-05 25.5 0.3 1.7 1 0 0 1 1 1 1 Sad1 / UNC-like C-terminal SUB1_ProdP9 PF18213.1 NODE_12576_length_1246_cov_198.126342_g9401_i0reverse_frame_2 - 0.28 11.1 4.1 2.1 8.2 0.1 3.1 3 0 0 3 3 3 0 SUB1 protease Prodomain ProdP9 DUF3488 PF11992.8 NODE_12576_length_1246_cov_198.126342_g9401_i0forward_frame_2 - 0.33 9.8 4.3 0.64 8.9 4.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) GTP_cyclohydro2 PF00925.20 ORF99867 - 8.5e-19 67.7 0.0 1.3e-18 67.2 0.0 1.3 1 0 0 1 1 1 1 GTP cyclohydrolase II GTP_CH_N PF12471.8 ORF99867 - 2.3e-12 47.1 0.1 9.5e-12 45.1 0.1 2.0 1 1 0 1 1 1 1 GTP cyclohydrolase N terminal DUF5608 PF18356.1 ORF99867 - 0.063 13.3 0.1 1.7 8.7 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5608) DUF3450 PF11932.8 ORF99709 - 0.0092 15.3 13.4 0.07 12.4 2.9 2.8 2 1 1 3 3 3 2 Protein of unknown function (DUF3450) C_Hendra PF16821.5 ORF99709 - 0.02 14.7 2.1 0.052 13.4 2.1 1.7 1 0 0 1 1 1 0 C protein from hendra and measles viruses DNase-RNase PF02577.14 ORF99709 - 0.039 13.6 0.0 0.071 12.8 0.0 1.4 1 0 0 1 1 1 0 Bifunctional nuclease TMF_DNA_bd PF12329.8 ORF99709 - 0.048 13.7 0.6 0.048 13.7 0.6 3.9 3 2 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Prefoldin_2 PF01920.20 ORF99709 - 0.065 13.2 22.7 1.2 9.1 1.1 3.5 3 0 0 3 3 3 0 Prefoldin subunit OmpH PF03938.14 ORF99709 - 0.091 13.1 16.3 0.43 10.9 9.3 2.4 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF99709 - 0.16 11.3 6.3 0.28 10.5 2.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) T3SSipB PF16535.5 ORF99709 - 0.27 11.7 4.0 0.17 12.4 0.8 2.1 2 0 0 2 2 2 0 Type III cell invasion protein SipB FliJ PF02050.16 ORF99709 - 0.31 11.3 13.2 7.4 6.8 9.1 2.7 2 1 0 2 2 2 0 Flagellar FliJ protein DivIC PF04977.15 ORF99709 - 0.5 10.2 0.1 0.5 10.2 0.1 3.7 2 1 0 3 3 3 0 Septum formation initiator TMPIT PF07851.13 ORF99709 - 0.69 9.1 13.2 0.13 11.5 7.8 2.1 2 0 0 2 2 2 0 TMPIT-like protein DUF2203 PF09969.9 ORF99709 - 1.1 9.9 8.4 1.2 9.8 3.1 2.7 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF99709 - 1.7 7.7 14.5 0.16 11.1 9.6 1.7 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_MT_bd PF06657.13 ORF99709 - 2.9 8.4 13.7 0.26 11.8 2.3 3.6 3 1 1 4 4 3 0 Centrosome microtubule-binding domain of Cep57 Syntaxin-6_N PF09177.11 ORF99709 - 6 7.5 13.7 1.2 9.8 6.5 2.9 2 1 1 3 3 3 0 Syntaxin 6, N-terminal UPF0242 PF06785.11 ORF99709 - 8.4 6.4 16.4 16 5.5 9.6 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus ISG65-75 PF11727.8 ORF99709 - 9.4 5.4 13.0 2.1 7.5 6.8 2.3 2 0 0 2 2 2 0 Invariant surface glycoprotein DUF3450 PF11932.8 ORF97077 - 0.0092 15.3 13.4 0.07 12.4 2.9 2.8 2 1 1 3 3 3 2 Protein of unknown function (DUF3450) C_Hendra PF16821.5 ORF97077 - 0.02 14.7 2.1 0.052 13.4 2.1 1.7 1 0 0 1 1 1 0 C protein from hendra and measles viruses DNase-RNase PF02577.14 ORF97077 - 0.039 13.6 0.0 0.071 12.8 0.0 1.4 1 0 0 1 1 1 0 Bifunctional nuclease TMF_DNA_bd PF12329.8 ORF97077 - 0.048 13.7 0.6 0.048 13.7 0.6 3.9 3 2 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Prefoldin_2 PF01920.20 ORF97077 - 0.065 13.2 22.7 1.2 9.1 1.1 3.5 3 0 0 3 3 3 0 Prefoldin subunit OmpH PF03938.14 ORF97077 - 0.091 13.1 16.3 0.43 10.9 9.3 2.4 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF97077 - 0.16 11.3 6.3 0.28 10.5 2.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) T3SSipB PF16535.5 ORF97077 - 0.27 11.7 4.0 0.17 12.4 0.8 2.1 2 0 0 2 2 2 0 Type III cell invasion protein SipB FliJ PF02050.16 ORF97077 - 0.31 11.3 13.2 7.4 6.8 9.1 2.7 2 1 0 2 2 2 0 Flagellar FliJ protein DivIC PF04977.15 ORF97077 - 0.5 10.2 0.1 0.5 10.2 0.1 3.7 2 1 0 3 3 3 0 Septum formation initiator TMPIT PF07851.13 ORF97077 - 0.69 9.1 13.2 0.13 11.5 7.8 2.1 2 0 0 2 2 2 0 TMPIT-like protein DUF2203 PF09969.9 ORF97077 - 1.1 9.9 8.4 1.2 9.8 3.1 2.7 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF97077 - 1.7 7.7 14.5 0.16 11.1 9.6 1.7 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_MT_bd PF06657.13 ORF97077 - 2.9 8.4 13.7 0.26 11.8 2.3 3.6 3 1 1 4 4 3 0 Centrosome microtubule-binding domain of Cep57 Syntaxin-6_N PF09177.11 ORF97077 - 5.9 7.5 13.7 1.2 9.8 6.5 3.0 2 1 1 3 3 3 0 Syntaxin 6, N-terminal UPF0242 PF06785.11 ORF97077 - 8.4 6.4 16.4 16 5.5 9.6 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus ISG65-75 PF11727.8 ORF97077 - 9.4 5.4 13.0 2.1 7.5 6.8 2.3 2 0 0 2 2 2 0 Invariant surface glycoprotein PfkB PF00294.24 ORF82140 - 4.1e-62 210.2 0.0 5.5e-62 209.8 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Ank_2 PF12796.7 ORF80829 - 5.3e-13 49.4 0.0 1.1e-12 48.4 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Acetyltransf_1 PF00583.25 ORF80829 - 3.8e-11 43.2 0.0 1.6e-10 41.2 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Ank_4 PF13637.6 ORF80829 - 7.9e-11 42.3 0.0 2.2e-10 40.9 0.0 1.9 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF80829 - 7.7e-10 38.2 0.1 8.5e-05 22.7 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_10 PF13673.7 ORF80829 - 8.7e-09 35.4 0.0 1.8e-08 34.4 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ank_5 PF13857.6 ORF80829 - 1.5e-06 28.3 0.1 7.7e-05 22.9 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_7 PF13508.7 ORF80829 - 4.6e-06 27.0 0.0 3e-05 24.4 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Ank PF00023.30 ORF80829 - 0.00015 22.1 0.0 0.0019 18.5 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Acetyltransf_CG PF14542.6 ORF80829 - 0.00028 21.0 0.1 0.0008 19.5 0.1 1.8 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 ORF80829 - 0.00093 19.1 0.0 0.004 17.1 0.0 2.0 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_3 PF13302.7 ORF80829 - 0.095 13.4 0.1 1.7 9.3 0.0 2.4 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DUF4472 PF14739.6 ORF76208 - 0.00065 20.4 17.5 0.00065 20.4 17.5 5.2 2 2 3 5 5 5 1 Domain of unknown function (DUF4472) DUF5053 PF16476.5 ORF76208 - 8.4 6.1 7.2 5.1 6.8 0.1 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF5053) Peptidase_M18 PF02127.15 ORF67009 - 2.6e-135 451.6 0.0 3.2e-135 451.3 0.0 1.1 1 0 0 1 1 1 1 Aminopeptidase I zinc metalloprotease (M18) Peptidase_M42 PF05343.14 ORF67009 - 8.4e-07 28.3 0.0 9.1e-05 21.6 0.0 2.2 2 0 0 2 2 2 2 M42 glutamyl aminopeptidase AP-5_subunit_s1 PF15001.6 ORF67009 - 0.048 13.6 0.2 0.079 12.9 0.2 1.3 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 DUF1840 PF08895.11 ORF67009 - 0.11 12.8 1.0 0.22 11.9 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) Adaptin_N PF01602.20 ORF6565 - 1e-51 176.1 18.1 1.1e-51 176.0 18.1 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF6565 - 8.7e-11 42.1 14.3 1.8e-06 28.1 2.8 4.6 2 1 2 4 4 4 3 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 ORF6565 - 4.9e-07 30.0 0.0 0.021 15.2 0.0 4.9 2 1 2 5 5 5 2 HEAT repeats HEAT_PBS PF03130.16 ORF6565 - 0.00021 21.7 0.0 0.01 16.4 0.1 3.6 3 0 0 3 3 3 1 PBS lyase HEAT-like repeat Vac14_Fab1_bd PF12755.7 ORF6565 - 0.018 15.6 3.7 3.3 8.4 0.0 4.3 3 2 0 3 3 3 0 Vacuolar 14 Fab1-binding region Glycoprotein_B PF00606.18 ORF6565 - 0.021 14.3 0.2 0.084 12.3 0.0 2.0 2 1 1 3 3 3 0 Herpesvirus Glycoprotein B ectodomain HEAT PF02985.22 ORF6565 - 0.085 13.2 1.7 20 5.8 0.0 5.2 6 0 0 6 6 6 0 HEAT repeat UNC45-central PF11701.8 ORF6565 - 0.23 11.4 5.7 1.4 8.8 0.4 3.5 2 2 1 3 3 3 0 Myosin-binding striated muscle assembly central MFS_1 PF07690.16 ORF63495 - 1.3e-53 182.2 45.6 2.4e-47 161.6 25.3 1.6 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 ORF63495 - 3.4e-13 48.8 6.1 0.0014 17.0 3.4 3.5 1 1 2 3 3 3 3 Organic Anion Transporter Polypeptide (OATP) family BT1 PF03092.16 ORF63495 - 0.014 13.7 2.5 0.031 12.5 2.5 1.5 1 0 0 1 1 1 0 BT1 family MFS_3 PF05977.13 ORF63495 - 0.059 11.8 11.1 0.08 11.3 11.1 1.2 1 0 0 1 1 1 0 Transmembrane secretion effector PIG-S PF10510.9 ORF56836 - 6.6e-41 140.7 0.1 8.2e-41 140.4 0.1 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-glycan biosynthesis class S protein HbrB PF08539.11 ORF56836 - 0.072 13.1 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 HbrB-like Chromate_transp PF02417.15 ORF56836 - 0.14 12.3 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 Chromate transporter Glyco_transf_34 PF05637.12 ORF55832 - 3.6e-15 56.3 0.3 5.1e-10 39.5 0.0 2.4 1 1 1 2 2 2 2 galactosyl transferase GMA12/MNN10 family DUF1981 PF09324.10 ORF5033 - 1.3e-15 57.0 0.2 1.3e-15 57.0 0.2 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF1981) UME PF08064.13 ORF5033 - 0.00016 21.5 0.9 0.26 11.2 0.0 3.7 3 2 0 3 3 3 2 UME (NUC010) domain MMS19_C PF12460.8 ORF5033 - 0.21 10.7 3.6 0.48 9.5 0.2 2.7 2 1 0 3 3 3 0 RNAPII transcription regulator C-terminal O-FucT PF10250.9 ORF49257 - 0.00034 20.4 0.0 0.00043 20.1 0.0 1.2 1 0 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase PAN_1 PF00024.26 ORF48473 - 2.6e-10 40.1 11.3 1.3e-07 31.4 3.9 2.3 2 0 0 2 2 2 2 PAN domain PAN_4 PF14295.6 ORF48473 - 3.4e-06 26.9 9.0 0.0012 18.7 1.2 2.5 2 0 0 2 2 2 2 PAN domain Orthoreo_P10 PF07204.11 ORF48473 - 0.0031 17.4 0.1 0.0068 16.3 0.1 1.5 1 0 0 1 1 1 1 Orthoreovirus membrane fusion protein p10 PAN_2 PF08276.11 ORF48473 - 0.013 15.6 8.7 0.1 12.7 2.1 2.5 2 0 0 2 2 2 0 PAN-like domain LST1 PF05083.13 ORF48473 - 0.025 14.8 0.0 0.047 14.0 0.0 1.5 1 0 0 1 1 1 0 LST-1 protein EphA2_TM PF14575.6 ORF48473 - 0.054 14.4 0.0 0.1 13.5 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain LAX PF15681.5 ORF48473 - 0.065 12.0 0.5 6.1 5.6 0.0 2.1 2 0 0 2 2 2 0 Lymphocyte activation family X PAN_3 PF08277.12 ORF48473 - 0.23 11.3 5.5 1 9.2 0.7 2.3 2 0 0 2 2 2 0 PAN-like domain Lipase_3 PF01764.25 ORF48265 - 9.7e-20 70.9 0.0 1.5e-19 70.3 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Ank_2 PF12796.7 ORF44149 - 5.1e-11 43.0 0.2 5.5e-07 30.1 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF44149 - 3.2e-10 40.1 0.2 1.6e-06 28.3 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF44149 - 8.6e-10 39.0 0.1 1.3e-08 35.2 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF44149 - 1.6e-06 28.0 0.0 0.13 12.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF44149 - 4.2e-06 26.9 0.0 0.0083 16.5 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat RRM_1 PF00076.22 ORF44149 - 0.00057 19.6 0.0 0.0012 18.7 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) adh_short PF00106.25 ORF39045 - 2.2e-22 79.5 0.0 1.9e-16 60.1 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF39045 - 1.5e-10 41.0 0.0 1e-06 28.5 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF39045 - 6.9e-08 32.6 0.1 1.3e-07 31.7 0.1 1.5 1 0 0 1 1 1 1 KR domain NAD_binding_3 PF03447.16 ORF39045 - 0.11 13.2 0.0 0.2 12.3 0.0 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain MbeD_MobD PF04899.12 ORF34317 - 0.023 14.8 2.7 0.031 14.4 0.2 2.5 2 1 0 2 2 2 0 MbeD/MobD like SlyX PF04102.12 ORF34317 - 0.11 13.2 0.4 0.11 13.2 0.4 5.6 4 1 1 5 5 5 0 SlyX NPV_P10 PF05531.12 ORF32520 - 8.9 6.9 12.4 5.1 7.6 1.2 3.1 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein Ank_2 PF12796.7 ORF22975 - 5.1e-11 43.0 0.2 5.5e-07 30.1 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF22975 - 3.2e-10 40.1 0.2 1.6e-06 28.3 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF22975 - 8.6e-10 39.0 0.1 1.3e-08 35.2 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF22975 - 1.6e-06 28.0 0.0 0.13 12.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF22975 - 4.2e-06 26.9 0.0 0.0083 16.5 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat RRM_1 PF00076.22 ORF22975 - 0.00057 19.6 0.0 0.0012 18.7 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Acatn PF13000.7 ORF2260 - 6.7e-90 302.1 25.5 8.6e-52 176.4 10.8 5.1 1 1 3 4 4 4 4 Acetyl-coenzyme A transporter 1 FA_desaturase PF00487.24 ORF1485 - 3.4e-23 82.8 2.4 3.4e-23 82.8 2.4 2.3 1 1 0 2 2 2 1 Fatty acid desaturase DUF5392 PF17370.2 ORF1485 - 0.024 14.7 0.2 0.26 11.4 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5392) Cation_ATPase_C PF00689.21 ORF1485 - 0.21 11.3 6.2 0.36 10.5 0.7 2.7 2 1 0 2 2 2 0 Cation transporting ATPase, C-terminus AgrB PF04647.15 ORF1485 - 0.73 9.1 11.7 2.4 7.4 3.2 3.0 3 0 0 3 3 3 0 Accessory gene regulator B DUF4483 PF14825.6 ORF13611 - 0.004 16.9 0.7 6.5 6.5 0.1 3.3 3 0 0 3 3 3 3 Domain of unknown function (DUF4483) DEAD PF00270.29 ORF109222 - 1.9e-40 138.5 0.3 3.1e-40 137.8 0.3 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF109222 - 2.4e-29 101.9 0.5 1.2e-28 99.7 0.1 2.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain CMS1 PF14617.6 ORF109222 - 3.5e-05 23.3 0.1 8e-05 22.1 0.1 1.6 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit TniB PF05621.11 ORF109222 - 0.0011 18.4 0.1 0.0022 17.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial TniB protein Helicase_RecD PF05127.14 ORF109222 - 0.0035 17.2 0.0 0.0059 16.5 0.0 1.3 1 0 0 1 1 1 1 Helicase AAA_30 PF13604.6 ORF109222 - 0.013 15.2 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain tRNA-synt_1b PF00579.25 ORF109222 - 0.024 13.9 0.0 0.042 13.2 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) AAA_19 PF13245.6 ORF109222 - 0.11 12.9 0.4 0.26 11.6 0.4 1.7 1 1 0 1 1 1 0 AAA domain Homeodomain PF00046.29 NODE_12617_length_1244_cov_236.372208_g9434_i0forward_frame_2 - 0.019 14.8 0.1 0.019 14.8 0.1 2.0 2 0 0 2 2 2 0 Homeodomain COLFI PF01410.18 NODE_12617_length_1244_cov_236.372208_g9434_i0forward_frame_2 - 0.35 10.1 3.7 0.59 9.4 0.1 2.1 2 0 0 2 2 2 0 Fibrillar collagen C-terminal domain Spike_torovirin PF17072.5 NODE_12598_length_1245_cov_126.671074_g9421_i0reverse_frame_2 - 1.1 6.3 2.0 1.5 5.9 2.0 1.1 1 0 0 1 1 1 0 Torovirinae spike glycoprotein Methyltransf_4 PF02390.17 ORF90014 - 0.075 12.5 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_25 PF13649.6 ORF90014 - 0.081 13.6 0.0 0.17 12.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Pyr_redox_2 PF07992.14 ORF87731 - 1.1e-47 162.7 5.3 1.8e-47 162.0 5.3 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF87731 - 2.6e-32 111.4 0.5 8.8e-32 109.7 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF87731 - 1.3e-20 73.8 2.6 3.7e-20 72.3 2.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF87731 - 1.4e-06 27.8 0.3 2.2e-06 27.2 0.3 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF87731 - 7.7e-06 25.3 0.4 0.039 13.1 0.1 2.1 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 ORF87731 - 0.012 14.8 3.6 0.36 10.0 0.1 2.2 2 0 0 2 2 2 0 FAD binding domain AlaDh_PNT_C PF01262.21 ORF87731 - 0.025 13.9 0.3 0.025 13.9 0.3 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.6 ORF87731 - 0.053 13.8 0.1 0.11 12.7 0.1 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DAO PF01266.24 ORF87731 - 2.9 7.4 10.8 1.5 8.3 0.1 2.8 2 1 1 3 3 3 0 FAD dependent oxidoreductase XPG_I PF00867.18 ORF80632 - 3e-21 75.6 0.0 3e-21 75.6 0.0 4.1 5 0 0 5 5 5 1 XPG I-region Sulfatase PF00884.23 ORF80269 - 1e-25 90.8 0.0 1.4e-25 90.4 0.0 1.1 1 0 0 1 1 1 1 Sulfatase DUF4976 PF16347.5 ORF80269 - 0.00019 21.6 0.4 0.0049 17.1 0.1 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4976) Phosphodiest PF01663.22 ORF80269 - 0.013 15.1 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF229 PF02995.17 ORF80269 - 0.068 11.8 0.0 0.11 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF229) SDF PF00375.18 ORF7833 - 3.9e-63 213.8 34.0 4.8e-63 213.5 34.0 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family ACOX PF01756.19 ORF76906 - 3.7e-18 65.7 0.0 6e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_dh_1 PF00441.24 ORF76906 - 0.17 12.1 0.0 0.34 11.1 0.0 1.5 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain Pyr_redox_2 PF07992.14 ORF74284 - 1.1e-47 162.7 5.3 1.8e-47 162.0 5.3 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF74284 - 2.6e-32 111.4 0.5 8.8e-32 109.7 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF74284 - 1.3e-20 73.8 2.6 3.7e-20 72.3 2.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF74284 - 1.4e-06 27.8 0.3 2.2e-06 27.2 0.3 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF74284 - 7.7e-06 25.3 0.4 0.039 13.1 0.1 2.1 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 ORF74284 - 0.012 14.8 3.6 0.36 10.0 0.1 2.2 2 0 0 2 2 2 0 FAD binding domain AlaDh_PNT_C PF01262.21 ORF74284 - 0.025 13.9 0.3 0.025 13.9 0.3 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.6 ORF74284 - 0.053 13.8 0.1 0.11 12.7 0.1 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DAO PF01266.24 ORF74284 - 2.9 7.4 10.8 1.5 8.3 0.1 2.8 2 1 1 3 3 3 0 FAD dependent oxidoreductase TPR_14 PF13428.6 ORF71620 - 0.00098 19.8 0.0 0.094 13.6 0.0 3.6 4 0 0 4 4 4 1 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 ORF71620 - 0.0033 17.4 0.4 0.0033 17.4 0.4 3.1 2 1 0 2 2 2 1 Mad3/BUB1 homology region 1 TPR_15 PF13429.6 ORF71620 - 0.02 14.1 0.2 0.69 9.1 0.0 2.7 2 1 0 2 2 2 0 Tetratricopeptide repeat Suf PF05843.14 ORF71620 - 0.54 10.2 14.9 1.2 9.0 1.2 3.6 2 2 1 3 3 3 0 Suppressor of forked protein (Suf) PPR_2 PF13041.6 ORF71620 - 6.2 7.1 6.3 85 3.5 0.0 4.3 5 0 0 5 5 5 0 PPR repeat family Pkinase PF00069.25 ORF6881 - 1.9e-18 66.8 0.0 1.9e-18 66.8 0.0 2.4 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6881 - 1.3e-13 50.8 0.2 3.9e-13 49.3 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase ORF6N PF10543.9 ORF6881 - 0.34 11.2 0.1 0.34 11.2 0.1 2.4 2 0 0 2 2 2 0 ORF6N domain Ank_2 PF12796.7 ORF65727 - 3.6e-16 59.5 0.2 4e-09 36.9 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF65727 - 2.3e-13 50.3 0.0 1.7e-07 31.7 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF65727 - 1.1e-08 35.1 0.0 0.14 12.5 0.0 4.4 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF65727 - 8.3e-07 28.8 0.0 7.9 7.4 0.0 5.7 6 0 0 6 6 6 2 Ankyrin repeat BSP_II PF05432.11 ORF65727 - 0.00086 19.1 19.7 0.0012 18.6 19.7 1.2 1 0 0 1 1 1 1 Bone sialoprotein II (BSP-II) Ank PF00023.30 ORF65727 - 0.015 15.7 0.0 32 5.2 0.0 4.4 4 1 0 4 4 4 0 Ankyrin repeat DUF3337 PF11816.8 ORF65727 - 0.46 10.3 8.2 0.62 9.9 0.9 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3337) Peptidase_M20 PF01546.28 ORF60960 - 6.4e-23 81.5 0.0 9e-23 81.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF60960 - 3e-11 43.2 0.0 7.6e-11 41.9 0.0 1.7 1 0 0 1 1 1 1 Peptidase dimerisation domain Mistic PF11458.8 ORF60960 - 0.043 13.8 0.0 0.17 11.8 0.0 2.0 1 0 0 1 1 1 0 Membrane-integrating protein Mistic V_ATPase_I PF01496.19 ORF48182 - 6.8 4.5 5.6 0.26 9.2 0.0 1.4 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family RCC1_2 PF13540.6 ORF42474 - 2.7e-28 97.1 21.7 0.00057 19.6 0.5 9.2 9 0 0 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat YukD PF08817.10 ORF42474 - 0.0035 18.0 0.0 0.007 17.0 0.0 1.5 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD Fascin PF06268.13 ORF42474 - 0.0037 17.5 0.1 2.2 8.5 0.0 4.2 5 0 0 5 5 5 1 Fascin domain Cyclophil_like PF04126.13 ORF42474 - 0.0038 17.0 0.0 4.3 7.2 0.0 3.2 3 1 1 4 4 4 2 Cyclophilin-like FAF PF11250.8 ORF42474 - 0.029 14.6 0.0 27 5.1 0.0 4.3 5 0 0 5 5 5 0 Fantastic Four meristem regulator Peptidase_S41 PF03572.18 ORF42474 - 0.064 12.8 3.0 9.5 5.8 0.1 3.2 2 1 0 3 3 3 0 Peptidase family S41 SIS_2 PF13580.6 ORF42474 - 0.077 13.0 6.3 23 5.0 0.0 5.2 5 3 1 6 6 6 0 SIS domain DUF4853 PF16145.5 ORF42474 - 0.077 13.1 1.3 3.1 7.9 0.0 3.8 4 1 1 5 5 5 0 Domain of unknown function (DUF4853) DpnD-PcfM PF14207.6 ORF42474 - 0.23 11.4 0.7 18 5.3 0.0 3.1 3 0 0 3 3 3 0 DpnD/PcfM-like protein Ago_hook PF10427.9 ORF42474 - 0.9 10.1 16.6 8.5 6.9 0.3 4.7 1 1 2 3 3 3 0 Argonaute hook PPR_2 PF13041.6 ORF30437 - 2e-27 95.1 0.0 2.5e-06 27.6 0.0 8.1 3 3 6 9 9 9 8 PPR repeat family PPR_3 PF13812.6 ORF30437 - 6.6e-19 67.7 0.0 0.0021 18.1 0.0 5.8 5 1 0 5 5 5 5 Pentatricopeptide repeat domain PPR PF01535.20 ORF30437 - 3.4e-12 45.7 7.6 0.16 12.3 0.2 8.6 9 1 0 9 9 9 4 PPR repeat PPR_1 PF12854.7 ORF30437 - 1.2e-09 37.7 0.1 0.75 9.6 0.0 6.4 6 1 0 6 6 6 2 PPR repeat PPR_long PF17177.4 ORF30437 - 0.00042 19.8 0.7 0.032 13.6 0.1 3.1 1 1 2 3 3 3 1 Pentacotripeptide-repeat region of PRORP N36 PF11438.8 ORF30437 - 0.76 9.6 4.8 13 5.7 0.1 4.0 4 0 0 4 4 4 0 36-mer N-terminal peptide of the N protein (N36) Aa_trans PF01490.18 ORF2915 - 6.6e-32 110.7 30.1 7.8e-32 110.5 30.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein zf-C2H2_6 PF13912.6 ORF28594 - 0.0013 18.7 0.9 0.0041 17.1 0.9 1.9 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_4 PF13894.6 ORF28594 - 0.024 15.5 1.4 0.087 13.7 1.4 2.1 1 0 0 1 1 1 0 C2H2-type zinc finger AT_hook PF02178.19 ORF28594 - 0.18 11.8 5.8 0.46 10.5 5.8 1.7 1 0 0 1 1 1 0 AT hook motif DinB_2 PF12867.7 ORF28489 - 0.00062 20.3 0.3 0.0048 17.4 0.1 2.3 2 1 0 2 2 2 1 DinB superfamily Methyltransf_24 PF13578.6 ORF28489 - 0.0011 19.9 0.0 0.0036 18.3 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain Ank_2 PF12796.7 ORF25160 - 8.9e-12 45.4 0.0 2.1e-11 44.3 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Acetyltransf_1 PF00583.25 ORF25160 - 3.7e-11 43.3 0.0 1.6e-10 41.2 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Ank_4 PF13637.6 ORF25160 - 1.4e-10 41.5 0.0 3.2e-10 40.3 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF25160 - 5.3e-10 38.7 0.0 7.6e-05 22.8 0.0 3.6 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_10 PF13673.7 ORF25160 - 8.6e-09 35.4 0.0 1.7e-08 34.4 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ank_5 PF13857.6 ORF25160 - 1.2e-06 28.7 0.0 7.5e-05 22.9 0.0 2.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_7 PF13508.7 ORF25160 - 4.2e-06 27.1 0.0 3e-05 24.4 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF25160 - 1.1e-05 25.2 0.0 0.004 17.1 0.0 3.1 3 0 0 3 3 3 1 FR47-like protein Acetyltransf_CG PF14542.6 ORF25160 - 0.00028 21.0 0.1 0.0008 19.5 0.1 1.8 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Ank PF00023.30 ORF25160 - 0.0011 19.3 0.0 0.015 15.7 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat MMR_HSR1 PF01926.23 ORF12733 - 9.4e-17 61.1 0.0 1.9e-16 60.2 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 ORF12733 - 4.5e-07 30.1 0.1 9.7e-07 29.0 0.1 1.6 1 1 0 1 1 1 1 Dynamin family FeoB_N PF02421.18 ORF12733 - 1.1e-05 25.0 1.0 0.0019 17.8 0.0 2.5 2 0 0 2 2 2 2 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF12733 - 0.00051 20.0 0.0 1.2 9.1 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 ORF12733 - 0.028 14.0 0.0 1.7 8.1 0.0 2.3 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain FtsK_SpoIIIE PF01580.18 ORF12733 - 0.034 13.5 0.1 0.065 12.6 0.1 1.6 1 1 0 1 1 1 0 FtsK/SpoIIIE family Arf PF00025.21 ORF12733 - 0.069 12.6 1.5 1.8 8.0 0.0 3.2 4 0 0 4 4 4 0 ADP-ribosylation factor family TctC PF03401.14 ORF12733 - 0.16 11.0 0.4 0.44 9.6 0.1 1.8 2 0 0 2 2 2 0 Tripartite tricarboxylate transporter family receptor Stealth_CR1 PF17101.5 ORF12733 - 0.2 11.4 1.2 0.62 9.9 1.2 1.8 1 0 0 1 1 1 0 Stealth protein CR1, conserved region 1 Pkinase PF00069.25 ORF110607 - 1.9e-18 66.8 0.0 1.9e-18 66.8 0.0 2.4 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF110607 - 1.3e-13 50.8 0.2 3.9e-13 49.3 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase ORF6N PF10543.9 ORF110607 - 0.34 11.2 0.1 0.34 11.2 0.1 2.4 2 0 0 2 2 2 0 ORF6N domain RCC1_2 PF13540.6 ORF110382 - 2.7e-28 97.1 21.7 0.00057 19.6 0.5 9.2 9 0 0 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat YukD PF08817.10 ORF110382 - 0.0035 18.0 0.0 0.007 17.0 0.0 1.5 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD Fascin PF06268.13 ORF110382 - 0.0037 17.5 0.1 2.2 8.5 0.0 4.2 5 0 0 5 5 5 1 Fascin domain Cyclophil_like PF04126.13 ORF110382 - 0.0038 17.0 0.0 4.3 7.2 0.0 3.2 3 1 1 4 4 4 2 Cyclophilin-like FAF PF11250.8 ORF110382 - 0.029 14.6 0.0 27 5.1 0.0 4.3 5 0 0 5 5 5 0 Fantastic Four meristem regulator Peptidase_S41 PF03572.18 ORF110382 - 0.064 12.8 3.0 9.5 5.8 0.1 3.2 2 1 0 3 3 3 0 Peptidase family S41 SIS_2 PF13580.6 ORF110382 - 0.077 13.0 6.3 23 5.0 0.0 5.2 5 3 1 6 6 6 0 SIS domain DUF4853 PF16145.5 ORF110382 - 0.077 13.1 1.3 3.1 7.9 0.0 3.8 4 1 1 5 5 5 0 Domain of unknown function (DUF4853) DpnD-PcfM PF14207.6 ORF110382 - 0.23 11.4 0.7 18 5.3 0.0 3.1 3 0 0 3 3 3 0 DpnD/PcfM-like protein Ago_hook PF10427.9 ORF110382 - 0.9 10.1 16.6 8.5 6.9 0.3 4.7 1 1 2 3 3 3 0 Argonaute hook GATase_5 PF13507.6 ORF105502 - 8.8e-101 336.4 0.0 1.1e-100 336.1 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DUF1604 PF07713.13 ORF105502 - 0.006 16.4 0.1 0.015 15.1 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1604) AIRS_C PF02769.22 ORF105502 - 0.074 13.2 0.2 0.15 12.2 0.2 1.5 1 0 0 1 1 1 0 AIR synthase related protein, C-terminal domain His_Phos_2 PF00328.22 ORF86167 - 2.2e-14 53.6 1.8 3.3e-14 53.0 1.8 1.3 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) BT1 PF03092.16 ORF86167 - 0.66 8.1 2.5 0.94 7.6 2.5 1.1 1 0 0 1 1 1 0 BT1 family DUF2790 PF10976.8 ORF80273 - 0.0038 17.2 0.7 0.052 13.6 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2790) Tubulin PF00091.25 ORF77294 - 3.5e-52 177.5 0.0 5.2e-52 176.9 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF77294 - 9.1e-50 168.0 0.1 1.5e-49 167.3 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF77294 - 0.027 14.2 0.0 0.099 12.3 0.0 2.0 3 0 0 3 3 3 0 Tubulin domain zf-RanBP PF00641.18 ORF7624 - 0.0026 17.0 2.5 0.0054 16.0 2.5 1.5 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others SSB PF00436.25 ORF7624 - 0.071 13.2 0.9 7.4 6.7 0.1 2.6 2 0 0 2 2 2 0 Single-strand binding protein family Stc1 PF12898.7 ORF7624 - 0.25 11.9 3.8 0.51 10.9 0.4 2.8 2 0 0 2 2 2 0 Stc1 domain His_Phos_2 PF00328.22 ORF74647 - 9e-18 64.8 1.2 9.9e-15 54.8 0.8 2.7 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) Alpha_kinase PF02816.18 ORF59758 - 1.2e-42 146.1 0.3 1.6e-42 145.7 0.3 1.2 1 0 0 1 1 1 1 Alpha-kinase family NTP_transf_2 PF01909.23 ORF59758 - 0.00093 19.4 0.0 0.0022 18.3 0.0 1.7 2 0 0 2 2 2 1 Nucleotidyltransferase domain HTH_15 PF12324.8 ORF50728 - 0.085 12.8 0.0 0.21 11.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase MbeD_MobD PF04899.12 ORF50081 - 0.031 14.4 0.2 0.031 14.4 0.2 2.5 3 1 0 3 3 3 0 MbeD/MobD like SlyX PF04102.12 ORF50081 - 0.11 13.2 0.5 0.11 13.2 0.5 5.7 4 1 1 5 5 5 0 SlyX WD40 PF00400.32 ORF42739 - 2.9e-58 192.5 29.6 7.6e-10 39.2 0.7 9.2 9 0 0 9 9 9 8 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF42739 - 1.5e-12 47.7 2.1 0.63 10.4 0.0 6.1 1 1 6 7 7 7 5 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF42739 - 1.3e-10 40.7 15.5 0.041 12.8 0.5 7.3 1 1 5 6 6 6 5 WD40 region of Ge1, enhancer of mRNA-decapping protein eIF2A PF08662.11 ORF42739 - 2.2e-07 31.0 0.0 0.033 14.1 0.1 3.5 2 2 1 3 3 3 3 Eukaryotic translation initiation factor eIF2A Nup160 PF11715.8 ORF42739 - 5.7e-06 25.2 15.7 0.65 8.6 0.1 7.0 2 2 6 8 8 8 4 Nucleoporin Nup120/160 Cytochrom_D1 PF02239.16 ORF42739 - 0.012 14.2 0.1 0.37 9.3 0.0 2.6 1 1 2 3 3 3 0 Cytochrome D1 heme domain PD40 PF07676.12 ORF42739 - 0.048 13.6 5.3 12 6.0 0.1 4.6 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat ubiquitin PF00240.23 ORF42739 - 0.089 12.6 0.0 0.19 11.5 0.0 1.6 1 0 0 1 1 1 0 Ubiquitin family UN_NPL4 PF11543.8 ORF42739 - 0.11 13.0 0.0 20 5.8 0.0 3.2 2 1 0 2 2 2 0 Nuclear pore localisation protein NPL4 UPF0506 PF11703.8 ORF42739 - 0.53 10.7 5.3 18 5.8 1.1 4.6 4 1 1 5 5 5 0 UPF0506 DUF5570 PF17731.1 ORF42739 - 6.9 6.8 12.3 1.6 8.8 0.2 4.5 3 2 4 7 7 7 0 Family of unknown function (DUF5570) Abhydrolase_1 PF00561.20 ORF32996 - 1.8e-20 73.7 0.1 1.9e-13 50.7 0.1 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF32996 - 8.1e-17 62.6 1.5 8.1e-17 62.6 1.5 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF32996 - 3.8e-14 52.5 0.0 4.1e-13 49.2 0.0 2.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF32996 - 0.0014 18.7 0.0 0.0028 17.7 0.0 1.5 1 0 0 1 1 1 1 TAP-like protein BAAT_C PF08840.11 ORF32996 - 0.0018 18.3 0.0 0.0065 16.4 0.0 1.9 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.18 ORF32996 - 0.002 17.7 0.0 0.04 13.5 0.0 2.2 2 0 0 2 2 2 1 Dienelactone hydrolase family Esterase PF00756.20 ORF32996 - 0.0033 17.1 0.0 0.0068 16.1 0.0 1.5 1 0 0 1 1 1 1 Putative esterase Abhydrolase_2 PF02230.16 ORF32996 - 0.0036 17.2 0.0 0.012 15.5 0.0 1.8 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Thioesterase PF00975.20 ORF32996 - 0.017 15.3 0.1 0.79 9.8 0.0 2.1 2 0 0 2 2 2 0 Thioesterase domain Sdh_cyt PF01127.22 ORF32996 - 0.032 14.3 0.1 0.14 12.2 0.1 2.1 1 1 1 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AXE1 PF05448.12 ORF32996 - 0.044 12.4 0.0 1.6 7.3 0.0 2.5 2 1 0 2 2 2 0 Acetyl xylan esterase (AXE1) Esterase_phd PF10503.9 ORF32996 - 0.12 11.8 0.0 0.28 10.6 0.0 1.6 1 0 0 1 1 1 0 Esterase PHB depolymerase Thioesterase PF00975.20 ORF30122 - 1.9e-06 28.2 0.0 3.7e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Thioesterase domain FSH1 PF03959.13 ORF30122 - 0.0037 17.0 0.0 0.0093 15.6 0.0 1.7 2 0 0 2 2 2 1 Serine hydrolase (FSH1) Abhydrolase_3 PF07859.13 ORF30122 - 0.11 12.4 0.4 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 alpha/beta hydrolase fold RabGAP-TBC PF00566.18 ORF2660 - 1.5e-39 135.9 0.0 2.1e-39 135.4 0.0 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain zf-RanBP PF00641.18 ORF23165 - 0.0026 17.0 2.5 0.0054 16.0 2.5 1.5 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others SSB PF00436.25 ORF23165 - 0.071 13.2 0.9 7.4 6.7 0.1 2.6 2 0 0 2 2 2 0 Single-strand binding protein family Stc1 PF12898.7 ORF23165 - 0.25 11.9 3.8 0.51 10.9 0.4 2.8 2 0 0 2 2 2 0 Stc1 domain cNMP_binding PF00027.29 ORF21409 - 4.5e-39 132.4 0.0 1.8e-19 69.6 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain DUF5586 PF17824.1 ORF21409 - 0.0034 16.6 0.0 0.0068 15.6 0.0 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5586) GerPC PF10737.9 ORF21409 - 0.015 15.4 1.2 4.4 7.3 0.0 3.0 3 0 0 3 3 3 0 Spore germination protein GerPC Dpy-30 PF05186.13 ORF21409 - 0.039 13.6 0.0 0.076 12.7 0.0 1.5 1 0 0 1 1 1 0 Dpy-30 motif DUF4846 PF16138.5 ORF21409 - 0.088 12.3 0.1 5.6 6.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (4846) ABC_tran_CTD PF16326.5 ORF21409 - 0.097 12.9 3.9 0.31 11.3 0.8 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain Nha1_C PF08619.10 ORF21409 - 0.73 9.0 6.4 1.1 8.4 5.6 1.8 1 1 1 2 2 2 0 Alkali metal cation/H+ antiporter Nha1 C terminus Iso_dh PF00180.20 ORF18328 - 6.9e-98 328.0 0.1 8.4e-98 327.7 0.1 1.1 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Iso_dh PF00180.20 ORF13490 - 6.9e-98 328.0 0.1 8.4e-98 327.7 0.1 1.1 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase LIAS_N PF16881.5 ORF12424 - 0.1 13.0 0.4 0.1 13.0 0.4 2.8 2 1 1 3 3 3 0 N-terminal domain of lipoyl synthase of Radical_SAM family AAA PF00004.29 ORF108705 - 7.1e-14 52.4 0.0 1.6e-13 51.2 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF108705 - 8e-12 45.9 0.8 1.1e-10 42.1 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 ORF108705 - 7.1e-10 39.3 0.0 2.1e-09 37.7 0.0 1.8 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 ORF108705 - 0.00054 19.9 0.0 0.41 10.5 0.0 2.4 2 0 0 2 2 2 2 NTPase AAA_lid_10 PF17872.1 ORF108705 - 0.0021 18.1 1.6 0.0045 17.1 1.6 1.4 1 0 0 1 1 1 1 AAA lid domain DUF2075 PF09848.9 ORF108705 - 0.0024 17.2 0.0 0.0052 16.1 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.6 ORF108705 - 0.0041 17.5 0.3 0.032 14.6 0.3 2.3 1 1 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 ORF108705 - 0.0043 17.3 0.7 0.0093 16.3 0.7 1.6 1 0 0 1 1 1 1 AAA C-terminal domain AAA_11 PF13086.6 ORF108705 - 0.05 13.4 0.0 0.12 12.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_32 PF13654.6 ORF108705 - 0.068 11.9 0.0 0.12 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 ORF108705 - 0.14 12.1 0.2 19 5.2 0.1 2.6 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 ORF108705 - 0.21 11.5 0.0 8.6 6.2 0.0 2.2 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea DHHC PF01529.20 ORF106164 - 1.5e-25 89.9 5.2 1.5e-25 89.9 5.2 2.2 2 1 0 2 2 2 1 DHHC palmitoyltransferase NAD_binding_1 PF00175.21 ORF9127 - 3.5e-28 98.4 0.3 3.1e-27 95.4 0.1 2.2 2 0 0 2 2 2 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF9127 - 0.0063 16.9 0.0 0.015 15.6 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase FAD-binding domain DUF1451 PF07295.11 ORF9127 - 0.11 12.5 0.1 0.18 11.8 0.1 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain Mt_ATP-synt_D PF05873.12 ORF89457 - 0.029 14.2 0.7 0.029 14.2 0.7 1.9 2 0 0 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) TolA_bind_tri PF16331.5 ORF89457 - 0.047 13.8 10.0 0.8 9.8 0.4 3.6 3 0 0 3 3 3 0 TolA binding protein trimerisation FG-GAP PF01839.23 ORF89457 - 0.098 12.8 0.3 0.21 11.8 0.3 1.5 1 0 0 1 1 1 0 FG-GAP repeat AAA_13 PF13166.6 ORF89457 - 0.22 10.1 6.3 0.049 12.3 2.7 1.6 1 1 0 1 1 1 0 AAA domain MscS_porin PF12795.7 ORF89457 - 0.33 10.5 19.2 0.059 12.9 1.1 3.2 3 0 0 3 3 3 0 Mechanosensitive ion channel porin domain Uso1_p115_C PF04871.13 ORF89457 - 1.6 9.1 23.3 0.38 11.1 1.2 3.3 2 1 1 3 3 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region Fibin PF15819.5 ORF89457 - 1.7 8.4 5.4 3.8 7.2 0.4 2.6 2 1 0 2 2 2 0 Fin bud initiation factor homologue CENP-F_leu_zip PF10473.9 ORF89457 - 2.7 8.0 16.0 1.4 8.9 4.5 2.9 3 0 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PIN_8 PF18476.1 ORF89457 - 6.4 6.6 8.0 6.7 6.5 0.0 2.8 2 1 0 2 2 2 0 PIN like domain SET PF00856.28 ORF84469 - 9.6e-07 29.3 0.0 2.7e-06 27.9 0.0 1.8 1 1 0 1 1 1 1 SET domain DUF5506 PF17611.2 ORF84469 - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5506) Nmad5 PF18757.1 ORF81923 - 3.5 7.8 7.0 0.95 9.6 2.2 2.3 2 1 1 3 3 3 0 Nucleotide modification associated domain 5 Ank_2 PF12796.7 ORF81792 - 4.6e-12 46.3 3.9 2.5e-08 34.4 2.4 3.9 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF81792 - 1.1e-11 44.6 6.3 0.042 14.3 0.0 4.9 5 0 0 5 5 5 4 Ankyrin repeat Ank_4 PF13637.6 ORF81792 - 5.7e-10 39.5 4.6 9.1e-05 22.9 0.7 4.2 3 1 1 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF81792 - 1.7e-09 37.1 3.9 0.75 10.6 0.0 5.8 6 0 0 6 6 6 3 Ankyrin repeat Ank_5 PF13857.6 ORF81792 - 3.6e-09 36.7 4.3 9.1e-07 29.0 0.1 3.8 2 2 1 3 3 3 1 Ankyrin repeats (many copies) ubiquitin PF00240.23 ORF81792 - 0.0023 17.7 0.0 0.0044 16.7 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family GTP_cyclohydro2 PF00925.20 ORF7953 - 1.3e-18 67.1 0.0 1.9e-18 66.6 0.0 1.2 1 0 0 1 1 1 1 GTP cyclohydrolase II GTP_CH_N PF12471.8 ORF7953 - 4.9e-12 46.0 0.1 2.5e-11 43.7 0.1 2.1 1 1 0 1 1 1 1 GTP cyclohydrolase N terminal DUF5608 PF18356.1 ORF7953 - 0.031 14.3 0.0 0.57 10.2 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5608) MORN PF02493.20 ORF7776 - 3.9e-32 108.2 39.6 1e-05 25.1 2.6 7.3 7 0 0 7 7 7 6 MORN repeat PMR5N PF14416.6 ORF7776 - 1.5 9.2 6.5 37 4.7 0.1 4.4 2 2 3 5 5 5 0 PMR5 N terminal Domain Mt_ATP-synt_D PF05873.12 ORF62790 - 0.029 14.2 0.7 0.029 14.2 0.7 1.9 2 0 0 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) TolA_bind_tri PF16331.5 ORF62790 - 0.047 13.8 10.0 0.8 9.8 0.4 3.6 3 0 0 3 3 3 0 TolA binding protein trimerisation FG-GAP PF01839.23 ORF62790 - 0.098 12.8 0.3 0.21 11.8 0.3 1.5 1 0 0 1 1 1 0 FG-GAP repeat AAA_13 PF13166.6 ORF62790 - 0.22 10.1 6.3 0.049 12.3 2.7 1.6 1 1 0 1 1 1 0 AAA domain MscS_porin PF12795.7 ORF62790 - 0.33 10.5 19.2 0.059 12.9 1.1 3.2 3 0 0 3 3 3 0 Mechanosensitive ion channel porin domain Uso1_p115_C PF04871.13 ORF62790 - 1.6 9.1 23.3 0.38 11.1 1.2 3.3 2 1 1 3 3 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region Fibin PF15819.5 ORF62790 - 1.7 8.4 5.4 3.8 7.2 0.4 2.6 2 1 0 2 2 2 0 Fin bud initiation factor homologue CENP-F_leu_zip PF10473.9 ORF62790 - 2.7 8.0 16.0 1.4 8.9 4.5 2.9 3 0 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PIN_8 PF18476.1 ORF62790 - 6.4 6.6 8.0 6.7 6.5 0.0 2.8 2 1 0 2 2 2 0 PIN like domain Zip PF02535.22 ORF60660 - 1e-42 146.6 3.0 1.4e-42 146.1 3.0 1.2 1 0 0 1 1 1 1 ZIP Zinc transporter PsbW PF07123.12 ORF60660 - 0.033 14.2 0.0 0.077 13.0 0.0 1.6 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) UDPGT PF00201.18 ORF59570 - 4.4e-23 81.9 0.0 6.5e-23 81.3 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_1_4 PF13692.6 ORF59570 - 0.0048 17.3 0.0 0.01 16.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 ADH_N PF08240.12 ORF57382 - 1.6e-30 105.2 0.1 4.1e-30 103.9 0.1 1.7 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.6 ORF57382 - 1.2e-12 47.5 0.1 2.4e-12 46.5 0.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-associated ADH_zinc_N PF00107.26 ORF57382 - 3.2e-10 40.1 0.2 3.5e-09 36.7 0.0 2.2 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF57382 - 9.3e-05 23.5 0.2 0.00064 20.8 0.2 2.1 1 1 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF57382 - 0.00094 18.7 0.0 0.0032 17.0 0.0 1.9 2 1 0 2 2 2 1 Glucose dehydrogenase C-terminus AlaDh_PNT_C PF01262.21 ORF57382 - 0.0096 15.2 0.0 0.018 14.3 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ATPgrasp_N PF18130.1 ORF57382 - 0.17 12.5 0.1 0.57 10.8 0.1 1.8 2 0 0 2 2 2 0 ATP-grasp N-terminal domain Helicase_C PF00271.31 ORF57277 - 6.3e-05 23.3 0.1 0.00015 22.0 0.1 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain EGF_alliinase PF04863.13 ORF56786 - 0.95 9.9 0.0 0.95 9.9 0.0 3.0 3 0 0 3 3 3 0 Alliinase EGF-like domain Bestrophin PF01062.21 ORF51560 - 6.8e-18 65.1 0.4 9.8e-18 64.6 0.4 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Pkinase PF00069.25 ORF45457 - 1.3e-55 188.6 0.0 1.8e-55 188.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45457 - 5.7e-24 84.8 0.0 9.2e-24 84.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF45457 - 4.8e-05 22.8 0.0 8.7e-05 22.0 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF45457 - 8.9e-05 21.9 0.0 0.00014 21.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF45457 - 0.034 13.7 0.1 0.14 11.7 0.1 1.9 2 0 0 2 2 2 0 Choline/ethanolamine kinase Pkinase_fungal PF17667.1 ORF45457 - 0.071 11.9 0.0 0.13 11.0 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF45457 - 0.073 13.0 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF45457 - 0.11 11.5 0.0 0.2 10.7 0.0 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 Fungal_KA1 PF16797.5 ORF45457 - 0.18 11.5 0.1 0.37 10.5 0.1 1.6 1 0 0 1 1 1 0 Fungal kinase associated-1 domain Asp PF00026.23 ORF1649 - 1.7e-39 136.1 0.3 2.1e-39 135.8 0.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF1649 - 6.4e-07 29.8 0.6 3.5e-05 24.1 0.0 2.8 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal Peptidase_M13 PF01431.21 ORF1649 - 0.02 14.5 0.0 0.048 13.2 0.0 1.6 1 0 0 1 1 1 0 Peptidase family M13 RNase_H_2 PF13482.6 ORF105468 - 6.2e-18 65.3 0.0 9.6e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 RNase_H superfamily DnaJ PF00226.31 ORF104760 - 1.1e-06 28.6 1.6 4.8e-06 26.6 0.0 2.8 3 0 0 3 3 3 1 DnaJ domain DIX PF00778.17 ORF104760 - 0.00076 19.3 0.7 0.0016 18.3 0.7 1.5 1 0 0 1 1 1 1 DIX domain p450 PF00067.22 ORF104687 - 5.6e-41 140.8 0.2 6.9e-41 140.5 0.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 ELH PF02323.15 ORF104687 - 0.095 12.1 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 Egg-laying hormone precursor Alpha-mann_mid PF09261.11 NODE_12916_length_1231_cov_718.062709_g9666_i0forward_frame_1 - 2.8e-14 53.0 0.0 5e-14 52.2 0.0 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 NODE_12916_length_1231_cov_718.062709_g9666_i0forward_frame_1 - 8.8e-13 48.3 0.2 1.4e-12 47.6 0.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain XPG_I PF00867.18 NODE_12878_length_1233_cov_236.646912_g2101_i2forward_frame_1 - 5.3e-14 52.3 0.8 8.3e-14 51.7 0.2 1.6 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 NODE_12878_length_1233_cov_236.646912_g2101_i2forward_frame_1 - 9.5e-10 38.9 0.0 2.1e-09 37.8 0.0 1.6 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I_2 PF12813.7 NODE_12878_length_1233_cov_236.646912_g2101_i2forward_frame_1 - 0.027 13.9 0.1 0.041 13.4 0.1 1.2 1 0 0 1 1 1 0 XPG domain containing PIN PF01850.21 NODE_12878_length_1233_cov_236.646912_g2101_i2forward_frame_1 - 0.088 13.3 0.0 0.16 12.5 0.0 1.4 1 0 0 1 1 1 0 PIN domain Macro_2 PF14519.6 NODE_12878_length_1233_cov_236.646912_g2101_i2forward_frame_1 - 0.09 12.1 0.1 2.5 7.4 0.0 2.3 2 0 0 2 2 2 0 Macro-like domain APH PF01636.23 ORF9021 - 0.00057 19.9 0.1 0.0011 19.0 0.1 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF9021 - 0.0037 16.7 0.0 0.0054 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9021 - 0.0097 15.2 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF9021 - 0.028 13.2 0.0 0.039 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase TMEM247 PF15444.6 ORF84971 - 0.3 11.1 0.1 0.3 11.1 0.1 1.7 2 0 0 2 2 2 0 Transmembrane protein 247 DUF1570 PF07607.11 ORF82834 - 0.021 15.2 0.3 0.78 10.0 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1570) DUF5065 PF16723.5 ORF82834 - 0.19 11.8 2.2 0.3 11.1 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5065) APH PF01636.23 ORF79791 - 0.00057 19.9 0.1 0.0011 19.0 0.1 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF79791 - 0.0037 16.7 0.0 0.0054 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF79791 - 0.0097 15.2 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF79791 - 0.028 13.2 0.0 0.039 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase LRR_8 PF13855.6 ORF78098 - 0.12 12.2 2.8 1.5 8.6 0.1 3.3 3 0 0 3 3 3 0 Leucine rich repeat Mu-like_Pro PF10123.9 ORF78098 - 5.6 6.4 8.1 1.5 8.3 1.7 2.6 2 1 1 3 3 3 0 Mu-like prophage I protein PP-binding PF00550.25 ORF69011 - 1.2e-14 54.4 0.1 2.9e-14 53.2 0.1 1.7 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_12 PF13424.6 ORF69011 - 3.6e-09 36.8 33.3 0.00012 22.3 9.2 4.1 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF69011 - 0.00016 21.1 21.0 0.00062 19.2 9.6 2.3 1 1 1 2 2 2 2 MalT-like TPR region TPR_1 PF00515.28 ORF69011 - 0.00079 19.1 7.7 0.35 10.8 0.9 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF69011 - 0.03 14.5 12.1 0.29 11.4 0.4 5.2 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF69011 - 0.063 13.4 24.8 0.47 10.7 0.2 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat Flavodoxin_4 PF12682.7 ORF69011 - 0.24 11.1 0.2 1.1 8.9 0.0 2.0 2 0 0 2 2 2 0 Flavodoxin Hypoth_Ymh PF09509.10 ORF69011 - 1 9.3 4.1 0.66 9.9 0.8 2.3 3 0 0 3 3 3 0 Protein of unknown function (Hypoth_ymh) ANAPC5 PF12862.7 ORF69011 - 2.1 8.4 5.5 3.6 7.7 0.2 3.0 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 5 APH PF01636.23 ORF67094 - 0.00057 19.9 0.1 0.0011 19.0 0.1 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF67094 - 0.0037 16.7 0.0 0.0054 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67094 - 0.0097 15.2 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF67094 - 0.028 13.2 0.0 0.039 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Asp PF00026.23 ORF66060 - 2.3e-45 155.4 12.3 3e-45 155.0 12.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF66060 - 3.1e-06 27.6 9.5 0.00023 21.4 0.4 3.0 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF66060 - 0.0077 16.0 0.0 0.015 15.1 0.0 1.5 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF66060 - 0.022 15.4 0.3 3.6 8.3 0.1 2.9 2 1 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 ORF66060 - 0.051 14.1 0.1 5.9 7.5 0.0 3.5 3 1 0 3 3 3 0 gag-polyprotein putative aspartyl protease Ribosomal_L4 PF00573.22 ORF63015 - 3.2e-38 131.3 0.2 3.2e-38 131.3 0.2 1.6 2 0 0 2 2 2 1 Ribosomal protein L4/L1 family Ribos_L4_asso_C PF14374.6 ORF63015 - 7e-20 70.9 5.4 7e-20 70.9 5.4 1.9 2 0 0 2 2 2 1 60S ribosomal protein L4 C-terminal domain Cwf_Cwc_15 PF04889.12 ORF63015 - 0.0089 15.8 14.1 0.014 15.2 14.1 1.3 1 0 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein NOA36 PF06524.12 ORF63015 - 0.02 14.2 11.3 0.034 13.5 11.3 1.3 1 0 0 1 1 1 0 NOA36 protein TMEM247 PF15444.6 ORF58593 - 0.3 11.1 0.1 0.3 11.1 0.1 1.7 2 0 0 2 2 2 0 Transmembrane protein 247 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks25.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks25.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks25.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks25.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TPR_1 PF00515.28 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 3.8e-05 23.3 0.9 0.044 13.6 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 6.8e-05 22.7 1.2 0.1 12.8 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.0018 18.3 1.2 1.8 9.0 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.004 17.0 0.3 0.073 13.0 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.0092 16.3 0.1 0.068 13.5 0.1 2.1 1 1 0 1 1 1 1 Tetratricopeptide repeat DDT PF02791.17 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.076 13.3 0.0 0.22 11.8 0.0 1.7 2 0 0 2 2 2 0 DDT domain TPR_7 PF13176.6 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.082 13.0 0.8 6.9 6.9 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF4614 PF15391.6 NODE_59676_length_278_cov_1.818930_g51736_i0forward_frame_2 - 1.1 9.2 4.9 1.4 8.9 4.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) UBA PF00627.31 NODE_59675_length_278_cov_1.835391_g51735_i0forward_frame_2 - 0.086 12.8 0.1 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 UBA/TS-N domain Pox_A31 PF05771.11 NODE_59674_length_278_cov_1.855967_g51734_i0reverse_frame_2 - 0.092 12.8 0.3 0.22 11.5 0.2 1.6 1 1 1 2 2 2 0 Poxvirus A31 protein Mad3_BUB1_I_2 PF17014.5 NODE_59673_length_278_cov_1.888889_g51733_i0reverse_frame_3 - 0.018 15.2 0.5 0.029 14.5 0.4 1.5 1 1 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein Rrn6 PF10214.9 NODE_59673_length_278_cov_1.888889_g51733_i0reverse_frame_3 - 0.12 10.8 3.9 0.13 10.7 3.9 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor AstB PF04996.12 NODE_59672_length_278_cov_1.901235_g51732_i0reverse_frame_2 - 3.1e-37 128.3 0.1 3.4e-37 128.2 0.1 1.0 1 0 0 1 1 1 1 Succinylarginine dihydrolase Arm PF00514.23 NODE_59661_length_278_cov_2.205761_g51721_i0forward_frame_3 - 0.0033 17.4 0.0 2.3 8.4 0.0 3.0 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat RNA_capsid PF03035.14 NODE_59657_length_278_cov_2.218107_g51717_i0reverse_frame_3 - 0.14 12.2 0.6 0.15 12.0 0.6 1.1 1 0 0 1 1 1 0 Calicivirus putative RNA polymerase/capsid protein YMF19 PF02326.15 NODE_59655_length_278_cov_2.267490_g51715_i0reverse_frame_3 - 8.5 7.2 8.4 31 5.4 8.4 1.9 1 1 0 1 1 1 0 Plant ATP synthase F0 zf-HYPF PF07503.12 NODE_59655_length_278_cov_2.267490_g51715_i0reverse_frame_2 - 0.11 12.2 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 HypF finger E7 PF00527.18 NODE_59655_length_278_cov_2.267490_g51715_i0reverse_frame_2 - 4.2 7.6 9.6 11 6.3 9.6 1.8 1 1 0 1 1 1 0 E7 protein, Early protein CPP1-like PF11833.8 NODE_59655_length_278_cov_2.267490_g51715_i0forward_frame_3 - 0.22 11.1 7.5 0.23 11.1 7.5 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like NPCC PF08058.11 NODE_59655_length_278_cov_2.267490_g51715_i0forward_frame_2 - 5 7.2 4.9 5.9 6.9 4.9 1.1 1 0 0 1 1 1 0 Nuclear pore complex component MORN PF02493.20 NODE_59652_length_278_cov_2.353909_g51712_i0reverse_frame_3 - 9.4e-11 41.0 11.5 3.9e-06 26.4 0.4 3.7 4 0 0 4 4 4 3 MORN repeat DUF3916 PF13079.6 NODE_59652_length_278_cov_2.353909_g51712_i0reverse_frame_3 - 0.2 11.6 1.2 3.4 7.6 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3916) DUF4360 PF14273.6 NODE_59648_length_278_cov_2.432099_g51708_i0forward_frame_3 - 0.053 13.4 0.1 0.065 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4360) NOG1_N PF17835.1 NODE_59644_length_278_cov_2.810700_g51704_i0reverse_frame_3 - 0.003 17.5 1.0 0.0036 17.3 1.0 1.2 1 0 0 1 1 1 1 NOG1 N-terminal helical domain Peptidase_C26 PF07722.13 NODE_59644_length_278_cov_2.810700_g51704_i0reverse_frame_3 - 0.048 13.4 0.0 0.052 13.3 0.0 1.0 1 0 0 1 1 1 0 Peptidase C26 RabGAP-TBC PF00566.18 NODE_59644_length_278_cov_2.810700_g51704_i0reverse_frame_3 - 0.34 10.5 2.8 0.42 10.2 2.8 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain GCP_N_terminal PF17681.1 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.019 14.6 0.1 0.024 14.3 0.1 1.1 1 0 0 1 1 1 0 Gamma tubulin complex component N-terminal BID PF06393.11 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.022 14.3 0.2 0.027 14.0 0.2 1.1 1 0 0 1 1 1 0 BH3 interacting domain (BID) HEPN_RnaseLS PF18869.1 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.032 14.4 0.2 0.034 14.3 0.2 1.2 1 0 0 1 1 1 0 RnaseLS-like HEPN URO-D PF01208.17 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.036 13.2 0.0 0.036 13.2 0.0 1.0 1 0 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) Phage_int_SAM_5 PF13102.6 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.078 13.3 1.1 0.89 9.9 0.8 2.2 1 1 0 1 1 1 0 Phage integrase SAM-like domain TPPII_N PF12583.8 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.078 13.6 0.0 0.09 13.4 0.0 1.2 1 0 0 1 1 1 0 Tripeptidyl peptidase II N terminal DNA_pol3_theta PF06440.11 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.13 11.9 0.4 0.62 9.8 0.2 1.9 1 1 1 2 2 2 0 DNA polymerase III, theta subunit DUF1422 PF07226.11 NODE_59642_length_278_cov_2.905350_g51702_i0reverse_frame_2 - 0.0081 16.2 0.0 0.0096 15.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1422) Lamprin PF06403.11 NODE_59641_length_278_cov_2.930041_g51701_i0reverse_frame_3 - 0.036 14.0 0.6 0.041 13.8 0.6 1.1 1 0 0 1 1 1 0 Lamprin Dabb PF07876.12 NODE_59640_length_278_cov_3.123457_g51700_i0reverse_frame_2 - 0.16 12.6 0.0 0.21 12.3 0.0 1.3 1 1 0 1 1 1 0 Stress responsive A/B Barrel Domain MCPsignal PF00015.21 NODE_59639_length_278_cov_3.168724_g51699_i0forward_frame_2 - 2.8e-31 108.6 10.5 3.5e-31 108.3 10.5 1.1 1 0 0 1 1 1 1 Methyl-accepting chemotaxis protein (MCP) signalling domain Nucleos_tra2_C PF07662.13 NODE_59639_length_278_cov_3.168724_g51699_i0forward_frame_2 - 0.019 14.8 0.1 0.021 14.7 0.1 1.1 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus DUF948 PF06103.11 NODE_59639_length_278_cov_3.168724_g51699_i0forward_frame_2 - 0.027 14.7 0.6 0.034 14.4 0.6 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) T7SS_ESX_EspC PF10824.8 NODE_59639_length_278_cov_3.168724_g51699_i0forward_frame_2 - 0.051 14.0 2.3 0.1 13.0 0.2 2.1 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm SHQ1 PF04925.15 NODE_59638_length_278_cov_3.213992_g51698_i0forward_frame_3 - 0.059 12.9 0.0 0.066 12.8 0.0 1.1 1 0 0 1 1 1 0 SHQ1 protein DUF4293 PF14126.6 NODE_59637_length_278_cov_3.353909_g51697_i0reverse_frame_3 - 0.052 13.8 0.1 0.067 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4293) Fer4 PF00037.27 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.00016 21.3 2.5 0.00016 21.3 2.5 1.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.0002 21.3 7.7 0.0014 18.6 3.5 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.0014 18.6 2.7 0.0014 18.6 2.7 2.1 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.0063 17.1 7.8 0.0099 16.4 7.5 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.028 14.5 2.9 0.028 14.5 2.9 1.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.044 14.0 7.8 0.07 13.3 3.7 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.11 12.7 7.4 0.25 11.5 7.4 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 1.6 9.5 10.3 0.3 11.7 2.6 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain SMP PF04927.12 NODE_59634_length_278_cov_3.506173_g51694_i0reverse_frame_3 - 0.68 10.5 8.4 1.1 9.8 7.3 1.7 1 1 1 2 2 2 0 Seed maturation protein PPR_1 PF12854.7 NODE_59633_length_278_cov_3.901235_g51693_i0reverse_frame_3 - 0.25 11.1 1.2 0.41 10.4 1.2 1.3 1 0 0 1 1 1 0 PPR repeat MoCF_biosynth PF00994.24 NODE_59633_length_278_cov_3.901235_g51693_i0forward_frame_2 - 3.8e-18 65.5 0.0 4.4e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain cNMP_binding PF00027.29 NODE_59628_length_278_cov_28.555556_g51688_i0forward_frame_3 - 4.5e-06 26.7 0.0 5.6e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain NIR_SIR PF01077.22 NODE_59626_length_278_cov_33.131687_g51686_i0reverse_frame_3 - 0.0042 16.6 0.0 0.0047 16.5 0.0 1.1 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Glt_symporter PF03616.14 NODE_59623_length_278_cov_40.411523_g51683_i0reverse_frame_2 - 0.24 10.0 0.0 0.29 9.8 0.0 1.0 1 0 0 1 1 1 0 Sodium/glutamate symporter Arrestin_C PF02752.22 NODE_59620_length_278_cov_46.205761_g51680_i0reverse_frame_2 - 0.073 13.5 0.5 0.086 13.3 0.5 1.1 1 0 0 1 1 1 0 Arrestin (or S-antigen), C-terminal domain FOXO_KIX_bdg PF16675.5 NODE_59620_length_278_cov_46.205761_g51680_i0reverse_frame_2 - 0.085 13.2 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 KIX-binding domain of forkhead box O, CR2 LAT PF15234.6 NODE_59619_length_278_cov_47.296296_g51679_i0forward_frame_3 - 0.56 9.9 2.1 0.65 9.7 2.1 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells FixG_C PF11614.8 NODE_59616_length_278_cov_50.530864_g51676_i0reverse_frame_3 - 0.0046 17.2 0.5 0.0057 16.9 0.3 1.4 1 1 0 1 1 1 1 IG-like fold at C-terminal of FixG, putative oxidoreductase UvrA_inter PF17760.1 NODE_59615_length_278_cov_50.580247_g51675_i0reverse_frame_3 - 0.034 14.2 0.1 0.042 13.9 0.1 1.1 1 0 0 1 1 1 0 UvrA interaction domain Collagen_bind_2 PF12904.7 NODE_59613_length_278_cov_51.037037_g51673_i0reverse_frame_2 - 0.036 14.0 0.1 0.04 13.9 0.1 1.2 1 0 0 1 1 1 0 Putative collagen-binding domain of a collagenase zf-MYND PF01753.18 NODE_59613_length_278_cov_51.037037_g51673_i0forward_frame_3 - 0.17 12.0 0.5 0.17 12.0 0.5 2.0 2 0 0 2 2 2 0 MYND finger LRR_6 PF13516.6 NODE_59611_length_278_cov_52.053498_g51671_i0forward_frame_3 - 0.016 15.2 0.5 0.032 14.3 0.1 1.8 2 0 0 2 2 2 0 Leucine Rich repeat Sel1 PF08238.12 NODE_59610_length_278_cov_53.028807_g51670_i0reverse_frame_3 - 6.8e-08 33.0 2.0 6.8e-08 33.0 2.0 2.1 2 0 0 2 2 2 1 Sel1 repeat RNA_pol_Rpb1_6 PF04992.14 NODE_59603_length_278_cov_60.078189_g51663_i0forward_frame_3 - 0.011 15.6 0.2 0.015 15.2 0.2 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 6 SASRP1 PF15160.6 NODE_59598_length_278_cov_77.584362_g51658_i0reverse_frame_2 - 1.5 8.4 12.0 1.8 8.2 12.0 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 Bacillus_PapR PF05968.11 NODE_59587_length_278_cov_116.559671_g51647_i0reverse_frame_2 - 0.093 12.6 0.0 0.52 10.2 0.0 2.0 2 0 0 2 2 2 0 Bacillus PapR protein DUF4783 PF16022.5 NODE_59585_length_278_cov_129.049383_g51645_i0forward_frame_2 - 0.037 14.2 0.0 0.058 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4783) DUF1907 PF08925.11 NODE_59584_length_278_cov_144.658436_g51644_i0reverse_frame_3 - 0.14 11.5 0.0 0.17 11.3 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1907) Imp-YgjV PF10688.9 NODE_59578_length_278_cov_194.209877_g51638_i0forward_frame_2 - 0.023 14.5 1.7 0.03 14.1 1.7 1.4 1 0 0 1 1 1 0 Bacterial inner membrane protein Ribosomal_L39 PF00832.20 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 1.4e-19 69.4 10.5 2.2e-19 68.8 10.5 1.3 1 0 0 1 1 1 1 Ribosomal L39 protein Pex14_N PF04695.13 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 0.018 15.7 1.7 0.021 15.5 1.7 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3449 PF11931.8 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 0.021 14.6 1.3 0.025 14.4 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) Roughex PF06020.11 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 0.041 13.0 1.3 0.039 13.1 1.3 1.1 1 0 0 1 1 1 0 Drosophila roughex protein Adeno_52K PF03052.15 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 0.052 13.0 2.0 0.053 12.9 2.0 1.1 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa Chorion_3 PF05387.11 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_2 - 0.024 14.3 1.3 0.024 14.3 1.3 1.1 1 0 0 1 1 1 0 Chorion family 3 PRIMA1 PF16101.5 NODE_59574_length_278_cov_403.061728_g51634_i0forward_frame_3 - 2.6 8.1 12.7 3.8 7.6 12.7 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Mito_fiss_reg PF05308.11 NODE_59574_length_278_cov_403.061728_g51634_i0forward_frame_3 - 7.8 6.5 6.0 8.5 6.4 6.0 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator SsgA PF04686.12 NODE_59572_length_278_cov_740.292181_g51632_i0forward_frame_3 - 0.021 14.8 0.0 0.024 14.6 0.0 1.1 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA Phage_integrase PF00589.22 NODE_59569_length_279_cov_0.872951_g51629_i0forward_frame_2 - 0.02 14.7 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Phage integrase family Ig_5 PF16681.5 NODE_59569_length_279_cov_0.872951_g51629_i0forward_frame_2 - 0.4 11.1 1.7 2.6 8.5 0.4 2.1 1 1 1 2 2 2 0 Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain HTH_35 PF13693.6 NODE_59568_length_279_cov_0.926230_g51628_i0forward_frame_3 - 0.063 13.3 0.0 0.077 13.0 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF3130 PF11328.8 NODE_59566_length_279_cov_1.016393_g51626_i0forward_frame_3 - 0.06 13.6 0.1 0.081 13.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3130 HTH_Tnp_Mu_1 PF02316.16 NODE_59565_length_279_cov_1.020492_g51625_i0reverse_frame_3 - 0.16 12.1 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Mu DNA-binding domain RNaseH_C PF09293.10 NODE_59560_length_279_cov_1.286885_g51620_i0forward_frame_3 - 0.034 14.5 0.2 0.064 13.6 0.1 1.4 1 1 0 1 1 1 0 T4 RNase H, C terminal PTN_MK_C PF01091.18 NODE_59559_length_279_cov_1.295082_g51619_i0reverse_frame_2 - 0.16 12.3 2.5 0.22 12.0 2.5 1.3 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, C-terminal domain Hce2 PF14856.6 NODE_59554_length_279_cov_1.393443_g51614_i0forward_frame_2 - 0.041 14.2 0.1 0.051 13.9 0.1 1.2 1 0 0 1 1 1 0 Pathogen effector; putative necrosis-inducing factor Hepatitis_core PF00906.20 NODE_59544_length_279_cov_1.594262_g51604_i0reverse_frame_2 - 0.097 12.2 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Hepatitis core antigen DUF1477 PF07346.11 NODE_59544_length_279_cov_1.594262_g51604_i0forward_frame_3 - 0.03 14.6 1.8 0.04 14.2 1.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1477) Rpr2 PF04032.16 NODE_59538_length_279_cov_1.758197_g51598_i0reverse_frame_2 - 0.1 12.9 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain VWA_3 PF13768.6 NODE_59537_length_279_cov_1.778689_g51597_i0reverse_frame_3 - 3.5e-11 43.3 0.0 3.9e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 NODE_59537_length_279_cov_1.778689_g51597_i0reverse_frame_3 - 3.8e-05 24.3 0.0 5e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain ubiquitin PF00240.23 NODE_59535_length_279_cov_1.799180_g51595_i0reverse_frame_3 - 5.6e-10 38.8 0.0 7.2e-10 38.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_59535_length_279_cov_1.799180_g51595_i0reverse_frame_3 - 0.00018 21.2 0.1 0.00022 21.0 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 NODE_59535_length_279_cov_1.799180_g51595_i0reverse_frame_3 - 0.052 13.6 0.1 7.3 6.7 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain DUF4820 PF16091.5 NODE_59531_length_279_cov_1.807377_g51591_i0reverse_frame_2 - 0.013 14.8 0.5 0.014 14.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) DUF1296 PF06972.11 NODE_59529_length_279_cov_1.856557_g51589_i0reverse_frame_3 - 0.021 15.0 0.1 1.4 9.1 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1296) PAGK PF15284.6 NODE_59528_length_279_cov_1.905738_g51588_i0reverse_frame_3 - 0.014 15.3 1.1 0.02 14.8 1.1 1.2 1 0 0 1 1 1 0 Phage-encoded virulence factor DUF3341 PF11821.8 NODE_59527_length_279_cov_1.909836_g51587_i0forward_frame_2 - 0.06 13.0 0.2 0.076 12.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) DUF1140 PF06600.11 NODE_59525_length_279_cov_1.938525_g51585_i0forward_frame_3 - 0.12 12.8 0.0 0.15 12.5 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1140) ArfGap PF01412.18 NODE_59525_length_279_cov_1.938525_g51585_i0forward_frame_2 - 0.68 10.0 5.3 0.85 9.7 5.3 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf CARMIL_C PF16000.5 NODE_59524_length_279_cov_2.000000_g51584_i0reverse_frame_3 - 0.014 15.0 0.3 0.015 15.0 0.3 1.1 1 0 0 1 1 1 0 CARMIL C-terminus Sugar_tr PF00083.24 NODE_59521_length_279_cov_2.106557_g51581_i0reverse_frame_2 - 2e-07 30.3 1.3 2.2e-07 30.1 1.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MOSC PF03473.17 NODE_59519_length_279_cov_2.122951_g51579_i0reverse_frame_2 - 1.6e-22 79.9 0.0 1.7e-22 79.8 0.0 1.0 1 0 0 1 1 1 1 MOSC domain Myofilin PF15929.5 NODE_59517_length_279_cov_2.139344_g51577_i0forward_frame_2 - 0.087 13.2 0.1 0.11 12.9 0.1 1.1 1 0 0 1 1 1 0 Myofilin Peptidase_C5 PF00770.18 NODE_59516_length_279_cov_2.151639_g51576_i0forward_frame_3 - 0.032 13.9 2.1 0.038 13.7 2.1 1.0 1 0 0 1 1 1 0 Adenovirus endoprotease VipB PF05943.12 NODE_59515_length_279_cov_2.172131_g51575_i0forward_frame_3 - 0.0024 16.7 0.0 0.0028 16.5 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion protein, EvpB/VC_A0108, tail sheath PPDFL PF15060.6 NODE_59514_length_279_cov_2.266393_g51574_i0reverse_frame_3 - 0.092 13.3 0.1 0.11 13.0 0.1 1.1 1 0 0 1 1 1 0 Differentiation and proliferation regulator Enterotoxin_HS1 PF08090.11 NODE_59514_length_279_cov_2.266393_g51574_i0reverse_frame_3 - 0.13 12.3 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Heat stable E.coli enterotoxin 1 PLN_propep PF16485.5 NODE_59513_length_279_cov_2.348361_g51573_i0forward_frame_3 - 0.11 12.3 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Protealysin propeptide Orthopox_F6 PF06601.12 NODE_59512_length_279_cov_2.348361_g51572_i0reverse_frame_3 - 0.066 13.4 0.1 0.11 12.7 0.1 1.4 1 1 0 1 1 1 0 Orthopoxvirus F6 protein Fe_dep_repress PF01325.19 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 2.5e-11 43.6 0.0 3.5e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 4.9e-07 29.6 0.0 7e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 2.4e-06 27.3 0.2 5.2e-06 26.2 0.1 1.5 1 1 0 1 1 1 1 MarR family HTH_24 PF13412.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 3.3e-06 26.6 0.0 4.5e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 8.2e-06 25.7 0.0 1e-05 25.4 0.0 1.3 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain GntR PF00392.21 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 1.2e-05 24.9 0.2 5.5e-05 22.7 0.0 2.1 1 1 1 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 6.5e-05 22.7 0.0 8.8e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.00073 20.0 0.1 0.0012 19.3 0.1 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0012 18.6 0.0 0.0018 18.0 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_50 PF18024.1 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0013 18.3 0.0 0.0025 17.4 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0014 18.5 0.0 0.0021 18.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0018 18.1 0.0 0.0025 17.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_1 PF00126.27 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0018 18.2 0.1 0.0048 16.8 0.1 1.8 1 1 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_37 PF13744.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0069 16.3 0.0 0.0091 15.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0069 16.2 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_23 PF13384.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0078 16.0 0.0 0.012 15.4 0.0 1.5 1 1 0 1 1 1 1 Homeodomain-like domain HTH_AsnC-type PF13404.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.013 15.3 0.2 0.019 14.8 0.2 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Rrf2 PF02082.20 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.015 15.6 0.0 0.019 15.3 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator LexA_DNA_bind PF01726.16 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.019 14.8 0.0 0.028 14.2 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain HTH_6 PF01418.17 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.021 14.8 0.0 0.033 14.2 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain, rpiR family HTH_29 PF13551.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.033 14.2 0.0 0.058 13.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix DUF2089 PF09862.9 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.033 14.2 0.0 0.036 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) DUF2250 PF10007.9 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.035 14.2 0.0 0.045 13.9 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_31 PF13560.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.04 14.2 0.1 0.059 13.7 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.7 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.041 13.9 0.0 0.087 12.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain TFIIE_alpha PF02002.17 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.042 13.7 0.0 0.048 13.5 0.0 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_38 PF13936.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.048 13.4 0.0 0.067 13.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4423 PF14394.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.051 13.3 0.0 0.071 12.8 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) KORA PF16509.5 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.058 13.7 0.0 0.073 13.3 0.0 1.3 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_47 PF16221.5 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.061 12.9 0.1 0.092 12.3 0.1 1.3 1 0 0 1 1 1 0 winged helix-turn-helix FeoC PF09012.10 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.063 13.3 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_10 PF04967.12 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.072 12.9 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain HTH_11 PF08279.12 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.081 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 HTH domain AbiEi_4 PF13338.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.084 13.0 0.1 0.15 12.3 0.1 1.6 1 1 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin HTH_28 PF13518.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.093 12.9 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.12 12.4 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix DUF4112 PF13430.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.14 12.4 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4112) UBA_6 PF18039.1 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.16 11.9 0.0 0.34 10.9 0.0 1.6 1 0 0 1 1 1 0 UBA-like domain TrbC PF04956.13 NODE_59510_length_279_cov_2.450820_g51570_i0forward_frame_2 - 0.093 13.0 2.1 0.13 12.5 2.1 1.2 1 0 0 1 1 1 0 TrbC/VIRB2 family DUF2026 PF09641.10 NODE_59499_length_279_cov_2.827869_g51559_i0forward_frame_3 - 0.17 11.5 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2026) DUF5539 PF17693.1 NODE_59498_length_279_cov_2.926230_g51558_i0reverse_frame_3 - 0.12 12.0 4.2 0.15 11.7 4.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5539) TGS PF02824.21 NODE_59497_length_279_cov_2.959016_g51557_i0forward_frame_2 - 0.11 12.5 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 TGS domain Leader_Trp PF08255.11 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_3 - 0.025 14.5 0.7 0.057 13.4 0.7 1.6 1 0 0 1 1 1 0 Trp-operon Leader Peptide ABC_tran PF00005.27 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 2e-11 44.5 0.2 2.4e-11 44.3 0.2 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 8.4e-05 22.2 0.2 0.00011 21.9 0.2 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.00031 20.7 0.0 0.00034 20.5 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0011 19.0 0.1 0.0021 18.1 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0021 18.6 0.0 0.0024 18.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0024 17.7 0.1 0.0035 17.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0071 16.1 0.3 0.012 15.4 0.2 1.4 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0088 16.4 0.1 0.0097 16.3 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.01 16.1 0.1 0.012 15.8 0.1 1.1 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.012 15.7 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.017 14.5 0.1 0.02 14.3 0.1 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family Ploopntkinase3 PF18751.1 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.024 14.5 0.0 0.031 14.2 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_22 PF13401.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.025 14.8 0.2 0.036 14.3 0.2 1.2 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.052 13.7 0.1 0.062 13.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.059 12.8 0.1 0.068 12.6 0.1 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain NB-ARC PF00931.22 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.069 12.3 0.1 0.072 12.3 0.1 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_25 PF13481.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.069 12.7 0.0 0.076 12.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.072 13.0 0.1 0.089 12.7 0.1 1.1 1 0 0 1 1 1 0 NACHT domain Septin PF00735.18 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.082 12.2 0.0 0.098 11.9 0.0 1.1 1 0 0 1 1 1 0 Septin AAA_18 PF13238.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.095 13.2 0.2 0.12 12.9 0.2 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.13 12.0 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.14 11.2 0.0 0.15 11.1 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.15 12.4 0.1 0.23 11.9 0.1 1.3 1 0 0 1 1 1 0 RNA helicase AAA_15 PF13175.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.23 11.1 0.2 0.28 10.9 0.2 1.0 1 0 0 1 1 1 0 AAA ATPase domain Hyccin PF09790.9 NODE_59489_length_279_cov_3.282787_g51549_i0reverse_frame_2 - 0.002 17.3 0.7 0.0022 17.2 0.7 1.1 1 0 0 1 1 1 1 Hyccin Frigida PF07899.11 NODE_59489_length_279_cov_3.282787_g51549_i0reverse_frame_2 - 0.16 11.2 0.2 0.19 11.0 0.2 1.1 1 0 0 1 1 1 0 Frigida-like protein YBD PF17725.1 NODE_59487_length_279_cov_4.143443_g51547_i0reverse_frame_2 - 0.066 13.1 0.0 0.09 12.6 0.0 1.2 1 0 0 1 1 1 0 YAP binding domain ZipA_C PF04354.13 NODE_59487_length_279_cov_4.143443_g51547_i0forward_frame_2 - 1.2e-12 47.8 0.0 1.4e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 ZipA, C-terminal FtsZ-binding domain TonB_N PF16031.5 NODE_59487_length_279_cov_4.143443_g51547_i0forward_frame_2 - 0.051 14.1 9.4 0.063 13.8 9.4 1.2 1 0 0 1 1 1 0 TonB polyproline region OAD_gamma PF04277.13 NODE_59487_length_279_cov_4.143443_g51547_i0forward_frame_2 - 2.6 8.7 4.2 3.3 8.4 4.2 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Nanovirus_C8 PF05629.11 NODE_59486_length_279_cov_4.901639_g51546_i0forward_frame_2 - 0.22 11.6 0.5 0.26 11.4 0.5 1.1 1 0 0 1 1 1 0 Nanovirus component 8 (C8) protein DUF2607 PF10795.9 NODE_59484_length_279_cov_20.434426_g51544_i0forward_frame_2 - 0.0032 17.6 2.2 0.0036 17.4 2.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2607) NIR_SIR PF01077.22 NODE_59483_length_279_cov_32.831967_g51543_i0forward_frame_3 - 0.0093 15.5 0.0 0.015 14.8 0.0 1.3 1 1 1 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59482_length_279_cov_32.831967_g51542_i0reverse_frame_3 - 0.021 14.4 0.0 0.028 13.9 0.0 1.3 1 1 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59481_length_279_cov_33.028689_g51541_i0reverse_frame_3 - 0.063 12.8 0.0 0.095 12.2 0.0 1.4 1 1 1 2 2 2 0 Nitrite and sulphite reductase 4Fe-4S domain DUF1664 PF07889.12 NODE_59480_length_279_cov_33.036885_g51540_i0reverse_frame_2 - 0.09 12.8 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF1736 PF08409.11 NODE_59477_length_279_cov_38.885246_g51537_i0forward_frame_3 - 0.086 12.8 0.9 0.11 12.5 0.2 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1736) Ank_4 PF13637.6 NODE_59476_length_279_cov_40.581967_g51536_i0reverse_frame_3 - 4.5e-08 33.5 0.1 6.4e-08 33.0 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_59476_length_279_cov_40.581967_g51536_i0reverse_frame_3 - 3.6e-07 30.7 0.0 4.2e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_59476_length_279_cov_40.581967_g51536_i0reverse_frame_3 - 7.6e-05 22.8 0.0 0.48 11.2 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_59476_length_279_cov_40.581967_g51536_i0reverse_frame_3 - 0.01 16.1 0.3 0.75 10.2 0.0 2.1 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Inhibitor_I71 PF12628.7 NODE_59473_length_279_cov_50.393443_g51533_i0reverse_frame_2 - 0.0099 15.7 4.1 0.012 15.4 4.1 1.1 1 0 0 1 1 1 1 Falstatin, cysteine peptidase inhibitor Herpes_LMP1 PF05297.11 NODE_59473_length_279_cov_50.393443_g51533_i0forward_frame_3 - 9.7 5.3 7.8 12 5.0 7.8 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) NDUF_B12 PF08122.12 NODE_59471_length_279_cov_57.331967_g51531_i0reverse_frame_2 - 0.072 13.1 0.5 0.12 12.4 0.1 1.6 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B12 subunit family Tnp_zf-ribbon_2 PF13842.6 NODE_59456_length_279_cov_72.077869_g51516_i0reverse_frame_2 - 0.089 13.6 1.9 7.8 7.4 0.4 2.4 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon VLPT PF07122.11 NODE_59456_length_279_cov_72.077869_g51516_i0reverse_frame_2 - 0.14 12.0 0.1 0.24 11.1 0.1 1.4 1 0 0 1 1 1 0 Variable length PCR target protein (VLPT) DAN PF03045.15 NODE_59452_length_279_cov_77.286885_g51512_i0reverse_frame_3 - 0.07 13.2 0.2 0.097 12.7 0.2 1.2 1 0 0 1 1 1 0 DAN domain YABBY PF04690.13 NODE_59452_length_279_cov_77.286885_g51512_i0forward_frame_2 - 0.038 14.5 0.1 0.044 14.3 0.1 1.1 1 0 0 1 1 1 0 YABBY protein zf-RING_6 PF14835.6 NODE_59451_length_279_cov_79.258197_g51511_i0forward_frame_3 - 0.0028 17.5 0.0 0.0051 16.6 0.0 1.4 1 1 0 1 1 1 1 zf-RING of BARD1-type protein CCSMST1 PF15013.6 NODE_59450_length_279_cov_80.827869_g51510_i0forward_frame_3 - 0.092 12.9 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 CCSMST1 family TTL PF03133.15 NODE_59448_length_279_cov_83.528689_g51508_i0reverse_frame_3 - 3.4e-08 33.0 0.0 3.9e-08 32.8 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_59448_length_279_cov_83.528689_g51508_i0reverse_frame_3 - 9e-06 25.1 0.0 1e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_59448_length_279_cov_83.528689_g51508_i0reverse_frame_3 - 0.052 12.8 0.0 0.057 12.7 0.0 1.1 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp DUF1490 PF07371.12 NODE_59447_length_279_cov_93.004098_g51507_i0reverse_frame_3 - 0.029 14.4 0.4 0.034 14.2 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) Lenti_VIF_2 PF07401.12 NODE_59438_length_279_cov_117.262295_g51498_i0reverse_frame_3 - 0.14 11.5 0.3 0.17 11.2 0.3 1.1 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein DisA_N PF02457.16 NODE_59436_length_279_cov_122.983607_g51496_i0forward_frame_3 - 0.047 13.3 0.0 0.065 12.8 0.0 1.1 1 0 0 1 1 1 0 DisA bacterial checkpoint controller nucleotide-binding DUF5475 PF17569.2 NODE_59435_length_279_cov_157.372951_g51495_i0reverse_frame_3 - 0.0025 18.1 0.4 0.0031 17.8 0.4 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5475) CorC_HlyC PF03471.17 NODE_59433_length_279_cov_167.516393_g51493_i0reverse_frame_2 - 0.26 11.3 3.0 0.28 11.2 0.4 1.9 1 1 1 2 2 2 0 Transporter associated domain ASFV_L11L PF05293.11 NODE_59433_length_279_cov_167.516393_g51493_i0forward_frame_3 - 0.04 14.3 6.1 0.04 14.3 6.1 1.5 1 1 0 1 1 1 0 African swine fever virus (ASFV) L11L protein CytB6-F_Fe-S PF08802.10 NODE_59431_length_279_cov_178.504098_g51491_i0reverse_frame_2 - 5.4e-05 23.1 0.3 5.4e-05 23.1 0.3 2.3 2 0 0 2 2 2 1 Cytochrome B6-F complex Fe-S subunit DUF2794 PF10984.8 NODE_59430_length_279_cov_178.655738_g51490_i0forward_frame_2 - 0.055 13.6 0.0 0.086 13.0 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2794) DUF3807 PF12720.7 NODE_59429_length_279_cov_197.217213_g51489_i0forward_frame_2 - 0.35 11.1 1.8 0.44 10.8 1.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3807) Ank_2 PF12796.7 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 6.8e-18 65.0 0.2 1.1e-17 64.4 0.2 1.3 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 3.6e-14 52.9 0.7 6.6e-08 32.9 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 3.6e-12 46.1 0.3 0.00074 19.9 0.1 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 6e-12 44.7 0.0 0.00014 22.0 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 1.4e-11 44.4 0.6 0.0014 18.9 0.0 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) tRNA_bind_2 PF13725.6 NODE_59423_length_279_cov_624.959016_g51483_i0forward_frame_2 - 3.1 7.4 3.5 72 3.0 0.2 2.8 3 0 0 3 3 3 0 Possible tRNA binding domain Chorein_N PF12624.7 NODE_59420_length_279_cov_740.655738_g51480_i0reverse_frame_2 - 6.5e-11 42.4 0.2 7.9e-11 42.1 0.2 1.1 1 0 0 1 1 1 1 N-terminal region of Chorein or VPS13 AbiJ_NTD4 PF18863.1 NODE_59420_length_279_cov_740.655738_g51480_i0reverse_frame_2 - 0.095 13.2 0.1 0.13 12.7 0.1 1.4 1 1 0 1 1 1 0 AbiJ N-terminal domain 4 DUF2066 PF09839.9 NODE_59420_length_279_cov_740.655738_g51480_i0reverse_frame_2 - 0.11 11.9 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2066) DUF5320 PF17253.2 ORF99008 - 9.2 7.4 7.5 24 6.1 7.5 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5320) DUF4599 PF15371.6 ORF98325 - 0.06 13.9 2.1 5.8 7.5 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4599) DUF2441 PF10386.9 ORF98206 - 0.049 13.6 0.9 0.086 12.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2441) TRP PF06011.12 ORF97983 - 0.23 10.1 7.5 0.25 10.0 7.5 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel zf_CCCH_4 PF18345.1 ORF97688 - 1.1e-07 31.6 1.4 2.1e-07 30.8 1.4 1.5 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 ORF97688 - 3.3e-07 30.1 0.1 5.9e-07 29.2 0.1 1.5 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF97688 - 0.00014 21.6 0.2 0.00014 21.6 0.2 1.7 2 0 0 2 2 2 1 CCCH-type zinc finger Torus PF16131.5 ORF97688 - 0.00098 19.8 0.0 0.0012 19.5 0.0 1.2 1 0 0 1 1 1 1 Torus domain zf-CCCH_2 PF14608.6 ORF97688 - 0.0037 17.7 0.0 0.0061 17.0 0.0 1.4 1 0 0 1 1 1 1 RNA-binding, Nab2-type zinc finger zf-CCCH_3 PF15663.5 ORF97688 - 0.0088 16.3 0.1 0.012 15.8 0.1 1.2 1 0 0 1 1 1 1 Zinc-finger containing family Allantoicase PF03561.15 ORF97599 - 0.1 12.6 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Allantoicase repeat Ank_2 PF12796.7 ORF96899 - 1.7e-18 67.0 0.1 1.9e-18 66.8 0.1 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF96899 - 6.9e-13 48.8 0.0 5.4e-07 30.0 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF96899 - 2e-11 43.0 0.0 0.00046 20.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF96899 - 3.5e-10 39.9 0.0 0.014 15.8 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF96899 - 1.8e-07 31.3 0.1 0.11 12.8 0.0 3.0 2 1 1 3 3 3 3 Ankyrin repeats (many copies) DUF2170 PF09938.9 ORF96899 - 0.01 15.5 0.0 0.43 10.3 0.0 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2170) Involucrin PF00904.17 ORF96899 - 0.31 11.9 4.5 6.8 7.8 1.1 3.2 3 0 0 3 3 3 0 Involucrin repeat HEAT PF02985.22 ORF96896 - 9.1e-05 22.4 0.5 0.00025 21.0 0.0 2.0 2 0 0 2 2 2 1 HEAT repeat HEAT_2 PF13646.6 ORF96896 - 0.00022 21.5 1.9 0.00027 21.3 1.9 1.2 1 0 0 1 1 1 1 HEAT repeats HEAT_EZ PF13513.6 ORF96896 - 0.00037 20.9 2.5 0.0006 20.3 2.5 1.4 1 0 0 1 1 1 1 HEAT-like repeat Nitr_red_bet_C PF14711.6 ORF96896 - 0.005 16.5 0.3 0.0061 16.2 0.3 1.2 1 0 0 1 1 1 1 Respiratory nitrate reductase beta C-terminal HrpB1_HrpK PF09613.10 ORF96896 - 0.0054 16.4 0.5 0.006 16.2 0.5 1.1 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB1_HrpK) Vac14_Fab1_bd PF12755.7 ORF96896 - 0.011 16.4 0.0 0.012 16.2 0.0 1.1 1 0 0 1 1 1 0 Vacuolar 14 Fab1-binding region DUF4072 PF13284.6 ORF96896 - 0.81 10.2 8.9 3 8.4 5.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4072) DUF3343 PF11823.8 ORF96729 - 0.09 12.3 0.1 0.18 11.3 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) TMEM240 PF15207.6 ORF9671 - 0.81 9.4 4.0 1.3 8.7 4.0 1.3 1 1 0 1 1 1 0 TMEM240 family ACTH_domain PF00976.18 ORF96424 - 0.047 13.6 1.1 0.16 12.0 1.1 2.0 1 0 0 1 1 1 0 Corticotropin ACTH domain Pkinase PF00069.25 ORF96333 - 5.4e-12 45.6 0.0 5.4e-12 45.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF96333 - 0.00022 20.6 0.0 0.00024 20.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase K_channel_TID PF07941.11 ORF96278 - 0.34 11.4 10.2 0.79 10.2 10.2 1.6 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain NAAA-beta PF15508.6 ORF95819 - 5e-05 23.5 0.0 8.8e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 beta subunit of N-acylethanolamine-hydrolyzing acid amidase CvfB_WH PF17783.1 ORF94518 - 0.0078 16.0 0.2 0.015 15.1 0.2 1.4 1 0 0 1 1 1 1 CvfB-like winged helix domain Lectin_N PF03954.14 ORF94518 - 0.046 13.5 0.3 0.06 13.1 0.3 1.1 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF1663 PF07909.11 ORF94210 - 0.033 13.0 0.3 0.037 12.8 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1663) Colicin_D PF11429.8 ORF94210 - 0.046 14.2 0.2 0.061 13.8 0.2 1.2 1 0 0 1 1 1 0 Colicin D DUF4269 PF14091.6 ORF94020 - 0.0088 16.3 0.4 0.011 16.0 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4269) DUF3560 PF12083.8 ORF94020 - 0.013 15.6 1.9 0.013 15.6 1.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3560) HAUS-augmin3 PF14932.6 ORF94020 - 0.015 14.9 3.7 0.015 14.8 3.7 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Cgr1 PF03879.14 ORF94020 - 0.044 14.1 6.8 0.053 13.9 6.8 1.1 1 0 0 1 1 1 0 Cgr1 family DUF4061 PF13270.6 ORF94020 - 0.061 13.6 1.4 0.071 13.4 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4061) APG6_N PF17675.1 ORF94020 - 0.27 11.8 11.2 0.48 10.9 11.2 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region FcoT PF10862.8 ORF93864 - 0.076 12.6 1.5 0.66 9.6 0.3 2.0 1 1 1 2 2 2 0 FcoT-like thioesterase domain INCENP_N PF12178.8 ORF93864 - 0.17 11.9 0.6 0.74 9.9 0.2 2.0 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal PrgI PF12666.7 ORF93476 - 0.015 16.0 2.0 0.019 15.7 2.0 1.2 1 0 0 1 1 1 0 PrgI family protein ATPase_gene1 PF09527.10 ORF93476 - 0.017 15.2 1.0 0.025 14.8 1.0 1.4 1 0 0 1 1 1 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter COR PF16095.5 ORF92726 - 0.013 15.4 1.8 0.015 15.1 1.8 1.1 1 0 0 1 1 1 0 C-terminal of Roc, COR, domain VESA1_N PF12785.7 ORF92303 - 0.94 8.4 5.8 0.98 8.3 5.8 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 zf-RING-like PF08746.11 ORF92240 - 1.9 8.9 12.0 5.5 7.4 5.5 2.2 1 1 1 2 2 2 0 RING-like domain DUF1499 PF07386.11 ORF92200 - 0.007 16.9 0.0 0.0088 16.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) fn1 PF00039.18 ORF91338 - 0.012 15.8 1.6 0.64 10.2 0.1 2.3 2 0 0 2 2 2 0 Fibronectin type I domain DUF1378 PF07125.11 ORF91235 - 0.066 13.4 0.0 0.097 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) UPF0093 PF03653.13 ORF90776 - 0.11 12.7 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) LAM_C PF12544.8 ORF89544 - 0.0038 17.4 0.1 0.004 17.3 0.1 1.2 1 0 0 1 1 1 1 Lysine-2,3-aminomutase IncE PF17627.2 ORF89331 - 0.1 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Inclusion membrane protein E Lant_dehydr_C PF14028.6 ORF892 - 0.064 12.8 0.0 0.068 12.7 0.0 1.1 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term Peptidase_C31 PF05410.13 ORF88261 - 0.027 14.6 0.0 0.033 14.3 0.0 1.3 1 1 0 1 1 1 0 Porcine arterivirus-type cysteine proteinase alpha HEAT PF02985.22 ORF87477 - 0.0022 18.1 0.0 0.0064 16.7 0.0 1.8 2 0 0 2 2 2 1 HEAT repeat ATP-synt_C PF00137.21 ORF86872 - 6e-18 64.9 6.8 7.8e-18 64.6 6.8 1.1 1 0 0 1 1 1 1 ATP synthase subunit C Orbi_VP5 PF00901.17 ORF86872 - 0.14 10.5 0.1 0.16 10.4 0.1 1.0 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP5 Glyco_transf_52 PF07922.11 ORF86696 - 0.012 15.0 3.3 0.012 14.9 3.3 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 52 HTH_28 PF13518.6 ORF86696 - 0.013 15.6 0.1 0.016 15.3 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 ORF86696 - 0.14 12.0 0.3 0.21 11.4 0.3 1.3 1 0 0 1 1 1 0 Homeodomain-like domain PhnA_Zn_Ribbon PF08274.12 ORF85736 - 0.048 13.6 0.0 0.18 11.8 0.0 2.0 2 1 0 2 2 2 0 PhnA Zinc-Ribbon MAM33 PF02330.16 ORF84155 - 0.0021 18.1 1.1 0.0022 18.0 1.1 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein CpXC PF14353.6 ORF84155 - 0.042 13.9 0.3 0.052 13.6 0.3 1.2 1 0 0 1 1 1 0 CpXC protein DLEU7 PF15760.5 ORF84155 - 0.15 11.5 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Leukemia-associated protein 7 DUF4116 PF13475.6 ORF84065 - 0.065 13.0 0.1 0.1 12.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) TFIIB_C_1 PF18542.1 ORF8367 - 0.11 12.6 1.6 0.14 12.2 1.3 1.5 1 1 0 1 1 1 0 Transcription factor IIB C-terminal module 1 DUF2489 PF10675.9 ORF83582 - 0.0083 16.0 7.0 0.0086 16.0 6.4 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2489) Adhesin_P1_N PF18652.1 ORF83582 - 0.009 16.0 3.2 0.009 16.0 3.2 1.7 1 1 0 1 1 1 1 Adhesin P1 N-terminal domain DUF1999 PF09390.10 ORF83582 - 0.012 15.3 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) YjfB_motility PF14070.6 ORF83582 - 0.11 12.7 1.2 0.19 11.9 1.1 1.5 1 1 0 1 1 1 0 Putative motility protein WDCP PF15390.6 ORF83582 - 1.7 7.0 7.7 1.6 7.0 7.7 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family DUF883 PF05957.13 ORF83582 - 6.1 7.5 8.0 5.2 7.7 0.9 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Polysacc_synt_C PF14667.6 ORF83400 - 1.4e-06 28.4 1.1 1.4e-06 28.4 1.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain DUF5389 PF17364.2 ORF83400 - 0.12 12.4 3.0 0.16 12.0 3.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5389) Reoviridae_Vp9 PF08978.10 ORF83063 - 0.03 13.5 0.0 0.038 13.2 0.0 1.1 1 0 0 1 1 1 0 Reoviridae VP9 DUF3301 PF11743.8 ORF82995 - 0.059 13.0 0.4 0.075 12.7 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) DUF3198 PF11433.8 ORF82740 - 0.12 12.3 2.4 8.2 6.4 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3198) Cloacin_immun PF03513.14 ORF82685 - 0.0035 17.6 0.2 0.0093 16.3 0.1 1.6 1 1 1 2 2 2 1 Cloacin immunity protein YscO PF07321.12 ORF82660 - 0.00038 20.4 0.3 0.00045 20.2 0.3 1.2 1 0 0 1 1 1 1 Type III secretion protein YscO ZapB PF06005.12 ORF82660 - 0.0017 18.8 6.9 0.0032 17.9 6.9 1.5 1 0 0 1 1 1 1 Cell division protein ZapB Cnn_1N PF07989.11 ORF82660 - 0.0027 17.8 0.8 0.005 17.0 0.8 1.4 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 bZIP_1 PF00170.21 ORF82660 - 0.0029 17.7 3.5 0.0051 16.9 3.5 1.4 1 0 0 1 1 1 1 bZIP transcription factor TMF_DNA_bd PF12329.8 ORF82660 - 0.0031 17.5 4.5 0.0051 16.8 4.5 1.4 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding KLRAQ PF10205.9 ORF82660 - 0.0043 17.2 1.3 0.0054 16.9 1.1 1.4 1 1 0 1 1 1 1 Predicted coiled-coil domain-containing protein TPR_MLP1_2 PF07926.12 ORF82660 - 0.0049 16.9 2.6 0.0072 16.4 2.6 1.3 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein CENP-F_N PF10481.9 ORF82660 - 0.0068 16.1 0.0 0.0076 15.9 0.0 1.1 1 0 0 1 1 1 1 Cenp-F N-terminal domain BLOC1_2 PF10046.9 ORF82660 - 0.0092 16.3 0.5 0.091 13.1 0.2 2.0 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 PI3K_P85_iSH2 PF16454.5 ORF82660 - 0.0094 15.6 1.6 0.012 15.2 1.3 1.4 1 1 0 1 1 1 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4407 PF14362.6 ORF82660 - 0.011 15.1 0.3 0.011 15.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GIT_CC PF16559.5 ORF82660 - 0.012 15.4 0.1 0.018 14.9 0.1 1.3 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor Spc7 PF08317.11 ORF82660 - 0.013 14.4 0.7 0.013 14.4 0.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF2730 PF10805.8 ORF82660 - 0.013 15.6 0.8 0.017 15.2 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2730) Ax_dynein_light PF10211.9 ORF82660 - 0.014 15.3 2.0 0.021 14.8 2.0 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain V_ATPase_I PF01496.19 ORF82660 - 0.016 13.2 0.3 0.018 13.0 0.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Yuri_gagarin PF15934.5 ORF82660 - 0.016 15.0 0.3 0.016 15.0 0.3 1.0 1 0 0 1 1 1 0 Yuri gagarin GAS PF13851.6 ORF82660 - 0.02 14.3 2.9 0.02 14.3 2.9 1.4 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DivIC PF04977.15 ORF82660 - 0.024 14.4 3.3 0.025 14.3 2.3 1.5 2 0 0 2 2 1 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF82660 - 0.024 14.9 4.7 0.032 14.5 4.7 1.4 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain CLZ PF16526.5 ORF82660 - 0.024 15.0 3.1 0.18 12.2 3.0 1.9 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Shugoshin_N PF07558.11 ORF82660 - 0.026 14.4 5.2 0.86 9.5 2.6 2.3 1 1 1 2 2 2 0 Shugoshin N-terminal coiled-coil region FlaC_arch PF05377.11 ORF82660 - 0.027 14.8 6.1 0.077 13.4 1.9 2.6 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) BST2 PF16716.5 ORF82660 - 0.031 14.9 1.7 0.048 14.2 1.7 1.3 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 GrpE PF01025.19 ORF82660 - 0.031 13.9 5.5 0.049 13.3 4.4 1.8 1 1 0 2 2 2 0 GrpE APG6_N PF17675.1 ORF82660 - 0.031 14.8 5.0 0.038 14.5 5.0 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region HALZ PF02183.18 ORF82660 - 0.037 14.3 3.4 0.091 13.0 3.5 1.7 1 1 0 1 1 1 0 Homeobox associated leucine zipper CP12 PF02672.15 ORF82660 - 0.042 14.6 0.6 0.042 14.6 0.6 1.7 2 0 0 2 2 2 0 CP12 domain LPP PF04728.13 ORF82660 - 0.05 14.0 1.8 0.1 13.0 1.8 1.5 1 0 0 1 1 1 0 Lipoprotein leucine-zipper bZIP_2 PF07716.15 ORF82660 - 0.1 12.7 5.6 0.2 11.7 5.6 1.5 1 0 0 1 1 1 0 Basic region leucine zipper DivIVA PF05103.13 ORF82660 - 0.12 12.4 3.5 0.099 12.7 2.2 1.5 2 0 0 2 2 1 0 DivIVA protein DUF4337 PF14235.6 ORF82660 - 0.14 12.2 0.1 0.17 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Atg14 PF10186.9 ORF82660 - 0.17 10.9 1.2 0.22 10.6 1.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TSC22 PF01166.18 ORF82660 - 0.24 11.7 3.6 0.48 10.8 3.6 1.6 1 1 0 1 1 1 0 TSC-22/dip/bun family BRI3BP PF14965.6 ORF82660 - 0.25 10.8 0.1 0.31 10.6 0.1 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 Ribosomal_L29 PF00831.23 ORF82660 - 2.6 8.1 6.7 1.9 8.5 4.4 1.9 1 1 1 2 2 2 0 Ribosomal L29 protein SepSecS PF05889.13 ORF82387 - 1.2e-32 113.1 0.0 1.4e-32 112.9 0.0 1.0 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS POLO_box PF00659.18 ORF81356 - 2.4e-20 72.5 0.1 3.4e-20 72.0 0.1 1.2 1 0 0 1 1 1 1 POLO box duplicated region DUF4524 PF15025.6 ORF81356 - 0.087 12.6 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4524) DUF229 PF02995.17 ORF81204 - 0.022 13.4 0.2 0.024 13.3 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF229) Phg_2220_C PF09524.10 ORF81078 - 0.13 12.4 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) DUF1463 PF07316.11 ORF80971 - 0.21 11.5 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1463) Homeobox_KN PF05920.11 ORF80581 - 4.1e-13 49.0 1.1 7.1e-13 48.2 1.1 1.4 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF80581 - 4.9e-07 29.5 1.4 7.8e-07 28.8 1.4 1.3 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF80581 - 0.011 15.2 0.2 0.032 13.7 0.1 1.8 2 0 0 2 2 2 0 Homeodomain leucine-zipper encoding, Homez Rhomboid PF01694.22 ORF80335 - 4.2e-20 72.3 8.1 4.3e-20 72.2 8.1 1.0 1 0 0 1 1 1 1 Rhomboid family B2-adapt-app_C PF09066.10 ORF7918 - 0.00024 21.2 0.0 0.00028 21.0 0.0 1.0 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain MIG-14_Wnt-bd PF06664.12 ORF78259 - 4.8e-13 49.0 6.0 4.9e-13 48.9 6.0 1.0 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion DotA PF11388.8 ORF78161 - 0.031 14.5 0.2 0.037 14.2 0.2 1.2 1 0 0 1 1 1 0 Phagosome trafficking protein DotA Asp PF00026.23 ORF77801 - 0.0019 17.7 0.2 0.0021 17.5 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF77801 - 0.0038 17.5 0.1 0.005 17.1 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Polysacc_synt_C PF14667.6 ORF77183 - 1.4e-06 28.4 1.1 1.4e-06 28.4 1.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain DUF5389 PF17364.2 ORF77183 - 0.12 12.4 3.0 0.16 12.0 3.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5389) DUF4712 PF15830.5 ORF76828 - 0.084 12.6 0.5 0.099 12.3 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4712) FANCI_S1-cap PF14674.6 ORF75493 - 0.045 13.8 0.1 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 FANCI solenoid 1 cap Defensin_3 PF08131.11 ORF75323 - 0.04 14.1 0.2 0.36 11.0 0.2 2.2 1 1 0 1 1 1 0 Defensin-like peptide family DUF5443 PF17518.2 ORF75323 - 0.11 11.4 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5443) Ribosomal_S19 PF00203.21 ORF74842 - 5.1e-36 122.4 0.0 5.8e-36 122.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19 CReP_N PF10472.9 ORF74741 - 0.0068 15.3 0.9 0.0083 15.0 0.9 1.0 1 0 0 1 1 1 1 eIF2-alpha phosphatase phosphorylation constitutive repressor RNR_N PF08343.10 ORF74635 - 0.014 15.4 1.1 0.016 15.3 0.5 1.4 2 0 0 2 2 2 0 Ribonucleotide reductase N-terminal SAS4 PF15460.6 ORF74635 - 0.038 14.1 2.0 0.2 11.7 0.6 2.0 1 1 1 2 2 2 0 Something about silencing, SAS, complex subunit 4 EB PF01683.18 ORF74477 - 0.061 13.6 11.9 0.092 13.1 11.9 1.3 1 0 0 1 1 1 0 EB module # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks260.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks260.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks260.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks260.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LSM PF01423.22 ORF74039 - 7.5e-08 32.0 3.2 8e-06 25.5 3.2 2.2 1 1 0 1 1 1 1 LSM domain Piezo_RRas_bdg PF12166.8 ORF73525 - 6e-14 52.2 0.5 7.6e-14 51.8 0.5 1.1 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain YtxH PF12732.7 ORF73060 - 0.094 13.3 1.8 0.12 12.9 1.8 1.3 1 1 0 1 1 1 0 YtxH-like protein DNA_pol_viral_C PF00336.18 ORF72920 - 0.15 11.4 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) C-terminal domain Wza_C PF18412.1 ORF72644 - 0.11 12.3 0.5 0.2 11.4 0.5 1.4 1 0 0 1 1 1 0 Outer-membrane lipoprotein Wza C-terminal domain FcoT PF10862.8 ORF7252 - 0.076 12.6 1.5 0.66 9.6 0.3 2.0 1 1 1 2 2 2 0 FcoT-like thioesterase domain INCENP_N PF12178.8 ORF7252 - 0.17 11.9 0.6 0.74 9.9 0.2 2.0 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal Asp PF00026.23 ORF72008 - 0.0019 17.7 0.2 0.0021 17.5 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF72008 - 0.0038 17.5 0.1 0.005 17.1 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Patched PF02460.18 ORF71845 - 6e-10 37.9 5.3 6.8e-10 37.7 5.3 1.0 1 0 0 1 1 1 1 Patched family DUF789 PF05623.12 ORF71518 - 0.043 13.5 0.1 0.046 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF789) Cnn_1N PF07989.11 ORF71438 - 0.0032 17.6 2.9 0.0049 17.0 2.9 1.3 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 UPF0242 PF06785.11 ORF71438 - 0.004 17.3 2.3 0.004 17.3 2.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus M16C_assoc PF08367.11 ORF71438 - 0.018 14.2 0.7 0.02 14.0 0.7 1.3 1 0 0 1 1 1 0 Peptidase M16C associated DUF4988 PF16378.5 ORF71438 - 0.091 12.4 1.2 0.12 12.0 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function zf-RING_2 PF13639.6 ORF71398 - 3.7e-14 52.8 7.4 4.8e-14 52.4 7.4 1.1 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF71398 - 1.9e-10 40.3 4.0 3.4e-10 39.5 4.0 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF71398 - 5.4e-10 39.0 6.8 7.4e-10 38.5 6.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF71398 - 3.4e-08 33.7 8.8 1.1e-07 32.0 8.8 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF71398 - 1.7e-07 31.1 5.0 2.2e-07 30.7 5.0 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF71398 - 4.9e-07 29.5 6.1 7e-07 29.0 6.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF71398 - 5e-07 29.6 4.5 7.9e-07 29.0 4.5 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF71398 - 2.7e-06 27.1 4.1 3.7e-06 26.7 4.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF71398 - 1.1e-05 25.0 2.7 1.5e-05 24.5 2.7 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF71398 - 2.2e-05 24.5 6.1 0.0016 18.6 6.1 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF71398 - 0.00013 21.8 6.3 0.00026 20.8 6.0 1.6 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF71398 - 0.00021 21.3 4.7 0.00047 20.2 4.7 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF71398 - 0.00039 20.3 4.1 0.0041 17.0 4.4 1.9 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 PHD PF00628.29 ORF71398 - 0.00093 19.0 3.9 0.0015 18.4 3.9 1.4 1 0 0 1 1 1 1 PHD-finger zf-RING-like PF08746.11 ORF71398 - 0.0025 18.1 4.5 0.0042 17.3 4.5 1.4 1 0 0 1 1 1 1 RING-like domain zf-RING_4 PF14570.6 ORF71398 - 0.0028 17.4 3.0 0.0042 16.9 3.0 1.3 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain C1_1 PF00130.22 ORF71398 - 0.014 15.3 4.6 0.066 13.1 2.1 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) RINGv PF12906.7 ORF71398 - 0.034 14.3 6.6 0.052 13.7 6.6 1.3 1 0 0 1 1 1 0 RING-variant domain zf-RING_9 PF13901.6 ORF71398 - 0.064 13.2 2.9 0.085 12.8 2.9 1.2 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zf-C3HC4_4 PF15227.6 ORF71398 - 0.12 12.6 3.0 0.39 10.9 3.0 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING DZR PF12773.7 ORF71398 - 0.15 12.1 3.2 0.74 9.9 3.2 2.0 1 1 0 1 1 1 0 Double zinc ribbon zf-RING_10 PF16685.5 ORF71398 - 0.19 11.9 4.6 0.28 11.3 4.6 1.3 1 1 0 1 1 1 0 zinc RING finger of MSL2 Zf_RING PF16744.5 ORF71398 - 0.23 11.6 3.7 0.33 11.1 3.7 1.5 1 1 0 1 1 1 0 KIAA1045 RING finger DiS_P_DiS PF06750.13 ORF71398 - 0.25 11.5 3.8 3 8.0 3.8 2.0 1 1 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain zf-C3H2C3 PF17122.5 ORF71398 - 1.5 9.0 9.5 0.28 11.2 4.8 2.1 2 1 0 2 2 2 0 Zinc-finger Histone_H2A_C PF16211.5 ORF692 - 0.17 11.6 2.2 0.45 10.3 2.2 1.7 1 1 0 1 1 1 0 C-terminus of histone H2A DUF4658 PF15555.6 ORF69134 - 0.081 13.0 0.5 0.097 12.8 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) ABC2_membrane PF01061.24 ORF69080 - 7.3e-05 22.3 1.7 7.3e-05 22.3 1.7 1.9 2 0 0 2 2 2 1 ABC-2 type transporter Diphtheria_T PF02764.14 ORF6907 - 0.04 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Diphtheria toxin, T domain DUF2737 PF10930.8 ORF68785 - 0.0091 15.6 0.7 0.016 14.8 0.7 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2737) CFC PF09443.10 ORF68447 - 0.025 14.4 0.7 0.025 14.4 0.7 1.7 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) zf-ANAPC11 PF12861.7 ORF68447 - 0.07 13.2 1.7 0.14 12.2 1.7 1.6 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 ORF68447 - 0.98 9.8 4.6 2.4 8.5 4.6 1.7 1 1 0 1 1 1 0 RING-H2 zinc finger domain DUF5320 PF17253.2 ORF6744 - 9.2 7.4 7.5 24 6.1 7.5 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5320) NuDC PF16273.5 ORF67244 - 0.016 15.7 0.2 0.089 13.3 0.0 1.9 2 0 0 2 2 2 0 Nuclear distribution C domain ARL6IP6 PF15062.6 ORF67020 - 0.024 14.7 1.6 5 7.3 0.3 2.3 1 1 1 2 2 2 0 Haemopoietic lineage transmembrane helix DUF4940 PF16298.5 ORF66841 - 0.00097 18.9 0.3 0.001 18.8 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4940) DMAP_binding PF06464.11 ORF65419 - 0.045 14.6 5.8 0.051 14.4 5.8 1.1 1 0 0 1 1 1 0 DMAP1-binding Domain Rtf2 PF04641.12 ORF65419 - 0.34 10.2 11.1 0.4 10.0 11.1 1.0 1 0 0 1 1 1 0 Rtf2 RING-finger RepB_primase PF16793.5 ORF649 - 0.032 14.4 0.3 0.033 14.3 0.3 1.1 1 0 0 1 1 1 0 RepB DNA-primase from phage plasmid DUF1378 PF07125.11 ORF64370 - 0.066 13.4 0.0 0.097 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) TACI-CRD2 PF09305.10 ORF6398 - 0.017 15.1 0.3 0.017 15.1 0.3 1.8 2 0 0 2 2 2 0 TACI, cysteine-rich domain Inhibitor_Mig-6 PF11555.8 ORF63921 - 6.4 6.9 15.9 0.55 10.4 0.4 2.4 2 1 0 2 2 2 0 EGFR receptor inhibitor Mig-6 DUF1298 PF06974.13 ORF63915 - 5.3e-09 36.2 0.1 6.1e-09 36.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Tom7 PF08038.12 ORF62332 - 0.0096 15.6 0.0 0.023 14.3 0.0 1.7 1 0 0 1 1 1 1 TOM7 family DUF1454 PF07305.12 ORF61978 - 0.022 14.2 2.4 0.027 13.9 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1454) DUF3678 PF12435.8 ORF61803 - 0.02 14.3 1.2 0.65 9.4 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) L_biotic_typeA PF04604.13 ORF61459 - 0.087 12.7 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Type-A lantibiotic PTS_IIB PF02302.17 ORF60944 - 2.2e-12 47.5 0.2 2.4e-12 47.4 0.2 1.2 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit RMF PF04957.12 ORF60874 - 0.069 13.4 1.2 0.069 13.4 1.2 1.8 2 1 0 2 2 2 0 Ribosome modulation factor DDE_Tnp_IS1 PF03400.13 ORF60267 - 0.061 13.7 0.0 0.078 13.3 0.0 1.3 1 1 0 1 1 1 0 IS1 transposase DUF4490 PF14892.6 ORF59819 - 0.035 14.2 0.1 0.059 13.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4490) DUF4121 PF13497.6 ORF59378 - 0.029 13.5 0.6 0.03 13.5 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4121) zf-RING-like PF08746.11 ORF58895 - 1.9 8.9 12.0 5.5 7.4 5.5 2.2 1 1 1 2 2 2 0 RING-like domain Diphtheria_T PF02764.14 ORF58606 - 0.04 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Diphtheria toxin, T domain Peptidase_S49_N PF08496.10 ORF58345 - 0.054 13.6 0.0 0.064 13.3 0.0 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Dzip-like_N PF13815.6 ORF58089 - 0.022 14.7 0.7 0.03 14.3 0.7 1.2 1 0 0 1 1 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal GCP_C_terminal PF04130.13 ORF58089 - 0.072 12.5 0.7 0.077 12.4 0.7 1.0 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal YqjK PF13997.6 ORF5753 - 0.12 12.6 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 YqjK-like protein Dpy-30 PF05186.13 ORF57486 - 6.1e-18 64.2 0.5 9e-18 63.7 0.5 1.3 1 0 0 1 1 1 1 Dpy-30 motif FeoB_associated PF12669.7 ORF570 - 4 7.9 6.9 3.3 8.2 2.2 2.3 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein FANCI_S3 PF14677.6 ORF568 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 CDRN PF05174.12 ORF56562 - 0.14 11.9 0.5 0.43 10.3 0.1 1.8 2 0 0 2 2 2 0 Cysteine-rich D. radiodurans N terminus SsgA PF04686.12 ORF56557 - 0.0056 16.7 0.1 0.0075 16.2 0.1 1.5 1 1 0 1 1 1 1 Streptomyces sporulation and cell division protein, SsgA PfkB PF00294.24 ORF56557 - 0.011 15.1 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 0 pfkB family carbohydrate kinase NIF PF03031.18 ORF56557 - 0.018 14.8 0.0 0.018 14.8 0.0 1.1 1 0 0 1 1 1 0 NLI interacting factor-like phosphatase Archease PF01951.16 ORF56557 - 0.041 14.1 0.1 0.053 13.8 0.1 1.2 1 0 0 1 1 1 0 Archease protein family (MTH1598/TM1083) MT PF12777.7 ORF56109 - 3.7e-10 39.3 3.0 4e-10 39.3 3.0 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Spc7 PF08317.11 ORF56109 - 0.00033 19.7 9.6 0.00037 19.5 9.6 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein Taxilin PF09728.9 ORF56109 - 0.00044 19.5 10.4 0.00048 19.4 10.4 1.0 1 0 0 1 1 1 1 Myosin-like coiled-coil protein MscS_porin PF12795.7 ORF56109 - 0.00054 19.6 7.7 0.00062 19.4 7.7 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel porin domain CENP-F_leu_zip PF10473.9 ORF56109 - 0.00087 19.3 13.2 0.0011 19.1 13.2 1.0 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 ORF56109 - 0.0041 16.5 14.6 0.0083 15.5 1.4 2.0 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding HrpB7 PF09486.10 ORF56109 - 0.005 17.2 2.2 0.006 17.0 2.2 1.3 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) DHR10 PF18595.1 ORF56109 - 0.0061 16.6 14.1 0.032 14.3 13.7 2.1 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain TolA_bind_tri PF16331.5 ORF56109 - 0.0077 16.3 4.5 0.011 15.8 4.5 1.2 1 0 0 1 1 1 1 TolA binding protein trimerisation Fez1 PF06818.15 ORF56109 - 0.008 16.7 9.6 0.01 16.3 9.6 1.1 1 0 0 1 1 1 1 Fez1 EzrA PF06160.12 ORF56109 - 0.0094 14.2 8.2 0.014 13.6 8.2 1.4 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA LPP PF04728.13 ORF56109 - 0.011 16.2 3.5 0.021 15.2 2.0 2.0 1 1 1 2 2 2 0 Lipoprotein leucine-zipper Atg14 PF10186.9 ORF56109 - 0.011 14.9 5.6 0.012 14.8 5.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ATG16 PF08614.11 ORF56109 - 0.011 16.0 11.7 0.016 15.4 11.7 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) IFT57 PF10498.9 ORF56109 - 0.014 14.3 6.0 0.015 14.3 6.0 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 UPF0242 PF06785.11 ORF56109 - 0.015 15.4 9.2 0.017 15.2 9.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus SlyX PF04102.12 ORF56109 - 0.016 15.8 7.9 0.029 15.0 7.9 1.6 1 1 0 1 1 1 0 SlyX HR1 PF02185.16 ORF56109 - 0.019 15.1 4.5 0.019 15.1 4.5 1.9 2 0 0 2 2 2 0 Hr1 repeat T3SSipB PF16535.5 ORF56109 - 0.02 15.4 4.2 0.022 15.2 4.2 1.1 1 0 0 1 1 1 0 Type III cell invasion protein SipB Snapin_Pallidin PF14712.6 ORF56109 - 0.026 14.9 5.5 0.034 14.6 5.5 1.3 1 0 0 1 1 1 0 Snapin/Pallidin DUF724 PF05266.14 ORF56109 - 0.028 14.2 8.1 0.036 13.9 8.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF3450 PF11932.8 ORF56109 - 0.033 13.5 7.2 0.035 13.4 7.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF3584 PF12128.8 ORF56109 - 0.034 11.7 8.3 0.036 11.6 8.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) FliJ PF02050.16 ORF56109 - 0.038 14.2 6.7 0.063 13.5 6.7 1.3 1 1 0 1 1 1 0 Flagellar FliJ protein MAD PF05557.13 ORF56109 - 0.045 12.1 9.4 0.05 12.0 9.4 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein BRE1 PF08647.11 ORF56109 - 0.055 13.6 12.0 0.26 11.4 1.3 2.0 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase DUF2968 PF11180.8 ORF56109 - 0.068 12.8 5.7 0.098 12.3 5.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Tektin PF03148.14 ORF56109 - 0.076 11.8 10.0 0.37 9.5 4.9 2.0 1 1 1 2 2 2 0 Tektin family CCDC144C PF14915.6 ORF56109 - 0.077 12.1 10.9 0.094 11.8 10.9 1.2 1 1 0 1 1 1 0 CCDC144C protein coiled-coil region JIP_LZII PF16471.5 ORF56109 - 0.083 13.1 12.6 0.16 12.2 8.7 2.1 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II ERM PF00769.19 ORF56109 - 0.089 12.6 12.8 0.1 12.4 12.8 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family APG6_N PF17675.1 ORF56109 - 0.095 13.2 16.0 0.18 12.3 16.0 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region YabA PF06156.13 ORF56109 - 0.096 13.3 5.7 0.12 13.0 5.7 1.2 1 0 0 1 1 1 0 Initiation control protein YabA FadA PF09403.10 ORF56109 - 0.12 12.9 12.2 0.76 10.3 6.4 2.0 1 1 1 2 2 2 0 Adhesion protein FadA DUF2730 PF10805.8 ORF56109 - 0.12 12.5 4.3 0.16 12.1 4.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2730) Tropomyosin_1 PF12718.7 ORF56109 - 0.12 12.5 13.9 0.23 11.6 13.9 1.6 1 1 0 1 1 1 0 Tropomyosin like Tropomyosin PF00261.20 ORF56109 - 0.12 11.7 14.1 0.14 11.5 14.1 1.0 1 0 0 1 1 1 0 Tropomyosin DUF4407 PF14362.6 ORF56109 - 0.12 11.7 5.4 0.14 11.5 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1664 PF07889.12 ORF56109 - 0.13 12.3 3.2 0.19 11.8 2.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Cluap1 PF10234.9 ORF56109 - 0.14 11.6 9.3 0.38 10.1 9.2 1.8 1 1 1 2 2 2 0 Clusterin-associated protein-1 FapA PF03961.13 ORF56109 - 0.15 10.6 6.9 0.17 10.5 6.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A PI3K_P85_iSH2 PF16454.5 ORF56109 - 0.15 11.6 8.3 0.32 10.6 8.3 1.5 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain ABC_tran_CTD PF16326.5 ORF56109 - 0.15 12.3 15.5 0.44 10.8 13.9 2.1 1 1 1 2 2 2 0 ABC transporter C-terminal domain BORCS7 PF16088.5 ORF56109 - 0.16 12.3 2.9 0.39 11.0 1.5 1.9 1 1 1 2 2 2 0 BLOC-1-related complex sub-unit 7 AAA_13 PF13166.6 ORF56109 - 0.17 10.5 6.0 0.18 10.4 6.0 1.0 1 0 0 1 1 1 0 AAA domain GCR PF02155.15 ORF56109 - 0.17 10.9 0.5 0.19 10.7 0.5 1.0 1 0 0 1 1 1 0 Glucocorticoid receptor CC2-LZ PF16516.5 ORF56109 - 0.17 12.2 11.4 0.5 10.8 6.7 2.0 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator TMF_TATA_bd PF12325.8 ORF56109 - 0.18 12.0 11.4 0.39 11.0 3.2 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF948 PF06103.11 ORF56109 - 0.19 12.0 3.1 0.74 10.1 1.8 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) CLZ PF16526.5 ORF56109 - 0.22 11.9 10.4 1.2 9.6 8.9 2.2 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels FlaC_arch PF05377.11 ORF56109 - 0.22 11.9 6.8 0.36 11.2 0.9 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Yuri_gagarin PF15934.5 ORF56109 - 0.22 11.3 6.7 0.27 11.0 6.7 1.0 1 0 0 1 1 1 0 Yuri gagarin KxDL PF10241.9 ORF56109 - 0.24 11.7 4.4 0.95 9.8 0.8 2.1 1 1 0 1 1 1 0 Uncharacterized conserved protein MPS2 PF17060.5 ORF56109 - 0.25 10.6 3.9 0.25 10.5 3.9 1.1 1 0 0 1 1 1 0 Monopolar spindle protein 2 DUF4200 PF13863.6 ORF56109 - 0.25 11.7 13.5 0.29 11.5 9.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) PEARLI-4 PF05278.12 ORF56109 - 0.27 10.8 8.0 0.27 10.8 6.8 1.6 1 1 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) DUF4618 PF15397.6 ORF56109 - 0.27 10.6 8.8 0.48 9.8 8.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Spc24 PF08286.11 ORF56109 - 0.33 11.2 11.8 7.2 6.9 11.8 2.1 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DASH_Hsk3 PF08227.11 ORF56109 - 0.35 11.3 3.8 0.29 11.5 1.1 2.2 1 1 1 2 2 2 0 DASH complex subunit Hsk3 like ADIP PF11559.8 ORF56109 - 0.36 10.9 11.0 0.64 10.1 9.2 1.6 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding Ly49 PF08391.10 ORF56109 - 0.37 11.2 3.4 0.44 10.9 3.4 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region Sec8_exocyst PF04048.14 ORF56109 - 0.4 10.6 5.5 0.95 9.3 5.1 1.8 1 1 0 1 1 1 0 Sec8 exocyst complex component specific domain Prefoldin_2 PF01920.20 ORF56109 - 0.4 10.6 13.6 4.2 7.4 0.7 2.6 1 1 1 2 2 2 0 Prefoldin subunit NPV_P10 PF05531.12 ORF56109 - 0.44 11.1 3.3 3.6 8.1 1.2 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Golgin_A5 PF09787.9 ORF56109 - 0.47 9.9 8.1 0.54 9.7 8.1 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4298 PF14131.6 ORF56109 - 0.51 10.3 6.2 44 4.1 6.2 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4298) Cep57_MT_bd PF06657.13 ORF56109 - 0.63 10.5 6.7 3 8.4 2.2 2.1 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 V_ATPase_I PF01496.19 ORF56109 - 0.64 7.9 4.7 0.69 7.8 4.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2203 PF09969.9 ORF56109 - 0.67 10.7 4.5 0.84 10.4 4.5 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) COG2 PF06148.11 ORF56109 - 0.69 10.0 5.3 1.1 9.3 4.3 1.7 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF16 PF01519.16 ORF56109 - 0.7 10.4 5.6 1.7 9.1 5.6 1.7 1 1 0 1 1 1 0 Protein of unknown function DUF16 FliD_N PF02465.18 ORF56109 - 0.75 10.5 6.9 4.1 8.2 1.3 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Exonuc_VII_L PF02601.15 ORF56109 - 0.77 9.3 5.4 0.85 9.1 5.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Laminin_II PF06009.12 ORF56109 - 0.78 9.7 6.8 1.3 9.0 6.9 1.4 1 1 0 1 1 1 0 Laminin Domain II CENP-H PF05837.12 ORF56109 - 0.8 10.1 10.5 1.3 9.5 10.5 1.4 1 1 0 1 1 1 0 Centromere protein H (CENP-H) TPR_MLP1_2 PF07926.12 ORF56109 - 0.81 9.7 15.9 1.2 9.2 10.8 2.4 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DivIC PF04977.15 ORF56109 - 0.86 9.4 10.5 1.6 8.6 1.7 2.2 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 ORF56109 - 0.9 8.7 4.7 0.99 8.6 4.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein TMF_DNA_bd PF12329.8 ORF56109 - 0.94 9.5 17.6 0.99 9.4 8.2 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding FAM76 PF16046.5 ORF56109 - 0.95 8.8 7.7 1.1 8.6 7.7 1.1 1 0 0 1 1 1 0 FAM76 protein DUF4140 PF13600.6 ORF56109 - 0.97 9.9 8.6 3.2 8.3 6.7 2.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF812 PF05667.11 ORF56109 - 1.3 7.9 10.0 1.5 7.6 10.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) GBP_C PF02841.14 ORF56109 - 1.4 8.2 10.2 1.5 8.1 10.2 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain Prefoldin PF02996.17 ORF56109 - 1.4 8.8 11.8 3.1 7.7 5.3 2.1 2 0 0 2 2 2 0 Prefoldin subunit Val_tRNA-synt_C PF10458.9 ORF56109 - 1.4 9.2 11.8 3.7 7.9 0.7 2.8 1 1 3 4 4 3 0 Valyl tRNA synthetase tRNA binding arm DASH_Spc19 PF08287.11 ORF56109 - 1.6 8.6 11.0 5.4 6.9 11.0 1.7 1 1 0 1 1 1 0 Spc19 YscO-like PF16789.5 ORF56109 - 1.8 8.6 13.8 5.9 6.9 5.6 2.0 1 1 1 2 2 2 0 YscO-like protein FemAB PF02388.16 ORF56109 - 2.3 7.0 6.1 2.4 6.9 6.1 1.1 1 0 0 1 1 1 0 FemAB family DUF773 PF05600.12 ORF56109 - 2.6 6.7 9.9 3.1 6.4 7.2 1.9 1 1 1 2 2 2 0 CDK5 regulatory subunit-associated protein 3 MRPL52 PF18699.1 ORF56109 - 2.6 8.3 6.7 39 4.5 0.0 2.3 1 1 1 2 2 2 0 Mitoribosomal protein mL52 Seryl_tRNA_N PF02403.22 ORF56109 - 3.2 8.0 11.4 4.8 7.5 3.4 2.0 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain OmpH PF03938.14 ORF56109 - 3.5 8.0 12.5 6.6 7.1 12.5 1.5 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) GrpE PF01025.19 ORF56109 - 3.7 7.2 12.2 11 5.6 12.2 1.8 1 1 0 1 1 1 0 GrpE DUF3847 PF12958.7 ORF56109 - 4.5 7.5 13.2 1.4 9.1 3.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3847) zf-C4H2 PF10146.9 ORF56109 - 6.2 7.1 8.2 11 6.3 8.2 1.4 1 1 0 1 1 1 0 Zinc finger-containing protein Swi5 PF07061.11 ORF56109 - 6.5 6.9 9.5 54 4.0 9.5 2.1 1 1 0 1 1 1 0 Swi5 XhlA PF10779.9 ORF56109 - 6.9 7.0 9.2 12 6.2 2.9 2.2 1 1 1 2 2 2 0 Haemolysin XhlA DUF2666 PF10869.8 ORF55752 - 0.004 17.4 0.1 0.0043 17.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2666) SUZ PF12752.7 ORF55714 - 0.11 13.2 0.2 0.17 12.7 0.2 1.3 1 1 0 1 1 1 0 SUZ domain FANCI_S3 PF14677.6 ORF55682 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 FeoB_associated PF12669.7 ORF55680 - 4 7.9 6.9 3.3 8.2 2.2 2.3 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein HMMR_N PF15905.5 ORF54678 - 0.005 16.3 4.2 0.0055 16.2 4.2 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Tropomyosin_1 PF12718.7 ORF54678 - 0.063 13.4 5.0 0.082 13.1 5.0 1.2 1 0 0 1 1 1 0 Tropomyosin like FAM76 PF16046.5 ORF54678 - 0.17 11.2 2.6 0.18 11.2 2.6 1.0 1 0 0 1 1 1 0 FAM76 protein YgaB PF14182.6 ORF54678 - 0.29 11.6 3.0 1.6 9.2 0.2 2.3 1 1 1 2 2 2 0 YgaB-like protein YhfZ_C PF14503.6 ORF54632 - 0.12 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 YhfZ C-terminal domain BTB PF00651.31 ORF54611 - 4.6e-09 36.5 0.1 5.4e-09 36.3 0.1 1.1 1 0 0 1 1 1 1 BTB/POZ domain Transferase PF02458.15 ORF53251 - 0.14 10.8 0.1 0.16 10.6 0.1 1.0 1 0 0 1 1 1 0 Transferase family Asp PF00026.23 ORF53184 - 2.9e-12 46.7 0.1 3.1e-12 46.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF53184 - 5e-08 33.4 0.0 5e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal DUF2721 PF11026.8 ORF52845 - 0.25 11.2 3.7 0.46 10.4 3.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) Adipogenin PF15202.6 ORF52845 - 4 7.5 6.3 1.8 8.6 2.9 1.9 1 1 1 2 2 2 0 Adipogenin BDM PF10684.9 ORF52668 - 5.2e-52 174.1 0.5 6.3e-52 173.8 0.5 1.1 1 0 0 1 1 1 1 Putative biofilm-dependent modulation protein YmgB PF10798.8 ORF52668 - 0.0014 18.4 0.0 0.0021 17.9 0.0 1.2 1 0 0 1 1 1 1 Biofilm development protein YmgB/AriR Asp PF00026.23 ORF51958 - 0.0019 17.7 0.2 0.0021 17.5 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF51958 - 0.0038 17.5 0.1 0.005 17.1 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal DMSP_lyase PF16867.5 ORF5171 - 0.14 11.8 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Dimethlysulfonioproprionate lyase Lep_receptor_Ig PF06328.11 ORF51616 - 0.074 13.0 0.1 0.085 12.8 0.1 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain NYN_YacP PF05991.11 ORF51446 - 0.032 14.2 0.1 0.036 14.0 0.1 1.3 1 1 0 1 1 1 0 YacP-like NYN domain Beta-TrCP_D PF12125.8 ORF51376 - 0.065 13.1 0.2 0.098 12.6 0.2 1.3 1 0 0 1 1 1 0 D domain of beta-TrCP DNA_ligase_A_N PF04675.14 ORF51318 - 1.3e-11 45.2 0.0 1.4e-11 45.1 0.0 1.0 1 0 0 1 1 1 1 DNA ligase N terminus CSTF2_hinge PF14327.6 ORF51318 - 0.091 13.2 0.1 2.3 8.7 0.0 2.1 2 0 0 2 2 2 0 Hinge domain of cleavage stimulation factor subunit 2 RPN7 PF10602.9 ORF5130 - 0.14 11.9 0.5 0.31 10.7 0.2 1.6 2 0 0 2 2 2 0 26S proteasome subunit RPN7 PTPS PF01242.19 ORF49683 - 0.11 12.5 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase DUF2401 PF10287.9 ORF48991 - 0.025 14.2 0.0 0.03 13.9 0.0 1.0 1 0 0 1 1 1 0 Putative TOS1-like glycosyl hydrolase (DUF2401) MORN PF02493.20 ORF48411 - 0.71 9.9 8.7 0.19 11.7 3.1 2.6 2 1 1 3 3 3 0 MORN repeat Transposase_24 PF03004.14 ORF48382 - 0.0025 17.9 0.3 0.0025 17.9 0.3 1.1 1 0 0 1 1 1 1 Plant transposase (Ptta/En/Spm family) RCC1_2 PF13540.6 ORF48348 - 9.4e-06 25.3 0.1 0.15 11.9 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Catalase_C PF18011.1 ORF48348 - 0.018 14.7 0.8 0.043 13.5 0.6 1.6 1 1 1 2 2 2 0 C-terminal domain found in long catalases DUF155 PF02582.14 ORF48348 - 0.018 15.1 0.0 4.4 7.4 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PLN_propep PF16485.5 ORF48348 - 0.039 13.7 0.1 0.28 10.9 0.0 2.0 2 0 0 2 2 2 0 Protealysin propeptide Sec66 PF09802.9 ORF48348 - 0.063 12.9 0.0 9.9 5.7 0.0 2.0 2 0 0 2 2 2 0 Preprotein translocase subunit Sec66 PheRS_DBD2 PF18554.1 ORF48348 - 0.12 12.4 9.3 0.81 9.7 1.7 2.5 2 0 0 2 2 2 0 PheRS DNA binding domain 2 RCC1 PF00415.18 ORF48348 - 1.2 9.8 3.4 4.2 8.1 0.2 2.5 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat TBP PF00352.21 ORF48010 - 7.2e-08 32.3 0.1 8.8e-08 32.0 0.1 1.1 1 0 0 1 1 1 1 Transcription factor TFIID (or TATA-binding protein, TBP) FcoT PF10862.8 ORF46911 - 0.076 12.6 1.5 0.66 9.6 0.3 2.0 1 1 1 2 2 2 0 FcoT-like thioesterase domain INCENP_N PF12178.8 ORF46911 - 0.17 11.9 0.6 0.74 9.9 0.2 2.0 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal DUF4682 PF15733.5 ORF46758 - 0.13 12.8 0.1 0.16 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4682) DUF4205 PF13898.6 ORF46695 - 0.12 11.3 0.0 0.13 11.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4205) BRE1 PF08647.11 ORF46026 - 6e-08 32.7 8.4 6.5e-08 32.5 8.4 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase DUF724 PF05266.14 ORF46026 - 0.0013 18.5 8.8 0.0017 18.2 8.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF724) HOOK PF05622.12 ORF46026 - 0.0016 16.7 7.5 0.0018 16.5 7.5 1.0 1 0 0 1 1 1 1 HOOK protein KASH_CCD PF14662.6 ORF46026 - 0.0021 17.9 8.9 0.003 17.4 8.9 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DUF2046 PF09755.9 ORF46026 - 0.0021 17.3 6.8 0.0025 17.1 6.8 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) Tropomyosin PF00261.20 ORF46026 - 0.0022 17.4 5.1 0.0027 17.1 5.1 1.0 1 0 0 1 1 1 1 Tropomyosin Tropomyosin_1 PF12718.7 ORF46026 - 0.0034 17.6 7.6 0.0039 17.3 7.6 1.1 1 0 0 1 1 1 1 Tropomyosin like UPF0242 PF06785.11 ORF46026 - 0.0041 17.2 8.0 0.0055 16.8 8.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF4449 PF14613.6 ORF46026 - 0.0043 17.2 4.1 0.0054 16.9 4.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4449) DMPK_coil PF08826.10 ORF46026 - 0.0044 17.1 8.8 0.045 13.9 2.8 2.2 1 1 1 2 2 2 1 DMPK coiled coil domain like ATG16 PF08614.11 ORF46026 - 0.0093 16.2 5.1 0.011 16.0 5.1 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) Spc7 PF08317.11 ORF46026 - 0.014 14.3 7.2 0.016 14.1 7.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein KIX_2 PF16987.5 ORF46026 - 0.014 15.3 1.8 0.026 14.5 1.6 1.7 1 1 0 1 1 1 0 KIX domain TMPIT PF07851.13 ORF46026 - 0.015 14.5 7.3 0.016 14.4 7.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF4795 PF16043.5 ORF46026 - 0.016 14.9 6.0 0.019 14.6 6.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF3450 PF11932.8 ORF46026 - 0.026 13.8 4.9 0.031 13.6 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4264 PF14084.6 ORF46026 - 0.031 13.9 0.4 0.044 13.4 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4264) DUF4407 PF14362.6 ORF46026 - 0.032 13.6 2.1 0.036 13.4 2.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spc24 PF08286.11 ORF46026 - 0.035 14.4 7.6 0.039 14.2 5.1 1.9 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 RasGAP_C PF03836.15 ORF46026 - 0.035 14.2 6.7 0.042 14.0 6.7 1.1 1 0 0 1 1 1 0 RasGAP C-terminus Cob_adeno_trans PF01923.18 ORF46026 - 0.047 13.8 0.9 0.052 13.7 0.9 1.2 1 0 0 1 1 1 0 Cobalamin adenosyltransferase Laminin_II PF06009.12 ORF46026 - 0.061 13.3 7.4 0.15 12.1 6.8 1.7 1 1 1 2 2 2 0 Laminin Domain II DUF4337 PF14235.6 ORF46026 - 0.11 12.6 1.8 0.13 12.3 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) TMF_DNA_bd PF12329.8 ORF46026 - 0.12 12.4 10.5 0.22 11.5 2.2 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding LMBR1 PF04791.16 ORF46026 - 0.12 11.2 4.5 0.12 11.2 4.5 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein HemX PF04375.14 ORF46026 - 0.17 11.1 5.4 0.2 10.9 5.4 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Nup54 PF13874.6 ORF46026 - 0.18 11.9 4.3 1.5 8.9 3.3 1.9 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 DUF745 PF05335.13 ORF46026 - 0.21 11.3 3.7 0.26 11.0 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF745) ABC_tran_CTD PF16326.5 ORF46026 - 0.21 11.9 5.3 0.35 11.1 3.1 2.1 1 1 1 2 2 2 0 ABC transporter C-terminal domain FlxA PF14282.6 ORF46026 - 0.3 11.1 13.2 0.14 12.2 7.9 2.0 1 1 1 2 2 2 0 FlxA-like protein SlyX PF04102.12 ORF46026 - 0.36 11.5 5.8 1.1 9.9 4.5 2.1 1 1 1 2 2 2 0 SlyX CENP-H PF05837.12 ORF46026 - 0.58 10.6 8.8 1 9.8 8.8 1.4 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DivIC PF04977.15 ORF46026 - 1.5 8.7 10.1 5.3 6.9 4.0 2.1 1 1 1 2 2 2 0 Septum formation initiator DUF1664 PF07889.12 ORF46026 - 1.5 8.9 7.0 4.8 7.2 7.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Fzo_mitofusin PF04799.13 ORF46026 - 1.8 8.1 6.6 2 7.9 6.6 1.1 1 0 0 1 1 1 0 fzo-like conserved region JIP_LZII PF16471.5 ORF46026 - 3.2 8.0 9.8 6.6 7.0 0.9 2.2 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II FlaC_arch PF05377.11 ORF46026 - 3.5 8.1 10.8 1.8 9.0 3.3 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Lge1 PF11488.8 ORF46026 - 3.6 7.8 11.9 5.4 7.3 5.2 2.1 1 1 1 2 2 2 0 Transcriptional regulatory protein LGE1 PI_PP_I PF18363.1 ORF45959 - 0.15 12.2 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphoinositide phosphatase insertion domain LURAP PF14854.6 ORF45850 - 0.098 12.6 0.6 0.12 12.3 0.6 1.2 1 0 0 1 1 1 0 Leucine rich adaptor protein RPA PF10134.9 ORF45827 - 0.17 11.3 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 Replication initiator protein A YjbE PF11106.8 ORF45811 - 0.074 13.3 2.8 0.1 12.8 2.8 1.1 1 0 0 1 1 1 0 Exopolysaccharide production protein YjbE ARL6IP6 PF15062.6 ORF45809 - 0.024 14.7 1.6 5 7.3 0.3 2.3 1 1 1 2 2 2 0 Haemopoietic lineage transmembrane helix Kinesin PF00225.23 ORF45685 - 4.9e-29 101.3 1.5 5.3e-29 101.2 1.5 1.0 1 0 0 1 1 1 1 Kinesin motor domain PIG-P PF08510.12 ORF44633 - 0.048 13.6 3.0 0.064 13.2 3.0 1.2 1 0 0 1 1 1 0 PIG-P NB PF04159.13 ORF44633 - 0.075 13.1 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 NB glycoprotein FeoB_associated PF12669.7 ORF44349 - 4 7.9 6.9 3.3 8.2 2.2 2.3 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein FANCI_S3 PF14677.6 ORF44347 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 ERGIC_N PF13850.6 ORF44328 - 0.025 14.9 0.5 0.031 14.6 0.5 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) YhfT PF10797.9 ORF43506 - 0.2 10.6 0.1 0.24 10.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function PGA2 PF07543.12 ORF42540 - 0.14 12.1 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 Ribosomal_L16 PF00252.18 ORF42103 - 6.2e-15 55.4 0.1 7e-15 55.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Sirohm_synth_C PF14823.6 ORF41390 - 0.11 12.1 0.2 0.18 11.4 0.2 1.3 1 0 0 1 1 1 0 Sirohaem biosynthesis protein C-terminal Gaa1 PF04114.14 ORF40273 - 0.031 13.3 0.5 0.028 13.5 0.5 1.1 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component AHSP PF09236.10 ORF40172 - 0.053 14.0 1.1 0.28 11.6 0.2 2.0 1 1 1 2 2 2 0 Alpha-haemoglobin stabilising protein Asp PF00026.23 ORF39737 - 2.9e-12 46.7 0.1 3.1e-12 46.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF39737 - 5e-08 33.4 0.0 5e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Aldo_ket_red PF00248.21 ORF39354 - 6.8e-15 55.0 0.1 1.2e-14 54.2 0.1 1.4 1 1 1 2 2 2 1 Aldo/keto reductase family Rbsn PF11464.8 ORF38042 - 0.024 14.4 0.0 0.15 11.8 0.0 2.0 2 0 0 2 2 2 0 Rabenosyn Rab binding domain UBA_4 PF14555.6 ORF35711 - 0.022 14.6 0.0 0.041 13.7 0.0 1.4 1 0 0 1 1 1 0 UBA-like domain ESP PF16590.5 ORF35489 - 0.074 13.3 0.1 0.11 12.8 0.1 1.4 1 1 0 1 1 1 0 Exocrine gland-secreting peptide Peptidase_U49 PF10463.9 ORF35298 - 0.04 13.7 0.2 0.046 13.5 0.2 1.0 1 0 0 1 1 1 0 Peptidase U49 ICL PF00463.21 ORF35213 - 6.6e-18 64.5 1.8 7.2e-18 64.4 1.8 1.0 1 0 0 1 1 1 1 Isocitrate lyase family ETC_C1_NDUFA4 PF04800.12 ORF35213 - 0.09 13.0 0.4 0.12 12.7 0.4 1.2 1 0 0 1 1 1 0 ETC complex I subunit conserved region DUF3546 PF12066.8 ORF34990 - 0.02 15.1 2.9 0.026 14.7 0.3 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF3546) YfcL PF08891.11 ORF34171 - 7.7e-35 119.1 0.2 8.7e-35 118.9 0.2 1.0 1 0 0 1 1 1 1 YfcL protein zf-RING-like PF08746.11 ORF34155 - 1.9 8.9 12.0 5.5 7.4 5.5 2.2 1 1 1 2 2 2 0 RING-like domain Spo7_2_N PF15407.6 ORF34019 - 0.21 11.2 0.0 0.77 9.4 0.0 1.8 2 0 0 2 2 2 0 Sporulation protein family 7 LuxE PF04443.12 ORF33958 - 0.16 11.0 0.3 0.17 10.9 0.3 1.0 1 0 0 1 1 1 0 Acyl-protein synthetase, LuxE FeoB_associated PF12669.7 ORF33083 - 4 7.9 6.9 3.3 8.2 2.2 2.3 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein FANCI_S3 PF14677.6 ORF33081 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 Pkinase PF00069.25 ORF33044 - 0.0003 20.3 0.0 0.0003 20.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain DUF2420 PF10336.9 ORF32633 - 0.18 11.8 0.0 0.24 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) PAX PF00292.18 ORF32206 - 0.024 14.6 0.1 0.029 14.3 0.1 1.1 1 0 0 1 1 1 0 'Paired box' domain Asp PF00026.23 ORF3209 - 0.0019 17.7 0.2 0.0021 17.5 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF3209 - 0.0038 17.5 0.1 0.005 17.1 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal FANCI_S3 PF14677.6 ORF31987 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 FeoB_associated PF12669.7 ORF31985 - 4 7.9 6.9 3.3 8.2 2.2 2.3 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein CoA_binding_3 PF13727.6 ORF31739 - 0.78 9.7 8.6 0.91 9.5 8.6 1.2 1 0 0 1 1 1 0 CoA-binding domain DUF4229 PF14012.6 ORF31739 - 4.4 7.5 10.8 0.46 10.6 5.3 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF4229) Glyco_transf_34 PF05637.12 ORF31698 - 0.00082 19.2 0.0 0.00094 19.0 0.0 1.1 1 0 0 1 1 1 1 galactosyl transferase GMA12/MNN10 family Defensin_3 PF08131.11 ORF30354 - 0.04 14.1 0.2 0.36 11.0 0.2 2.2 1 1 0 1 1 1 0 Defensin-like peptide family DUF5443 PF17518.2 ORF30354 - 0.11 11.4 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5443) DUF4239 PF14023.6 ORF30259 - 0.079 12.7 0.0 0.08 12.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) Hydrolase_like PF13242.6 ORF30080 - 4.3e-06 26.7 0.0 5.7e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 ORF30080 - 1.3e-05 25.3 0.0 1.6e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF30080 - 0.0017 18.7 0.1 0.0022 18.3 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Sec66 PF09802.9 ORF30080 - 0.017 14.7 0.0 0.019 14.5 0.0 1.0 1 0 0 1 1 1 0 Preprotein translocase subunit Sec66 zf_C2H2_6 PF18450.1 ORF29952 - 2.2 8.1 4.3 3.5 7.4 4.3 1.2 1 0 0 1 1 1 0 Zinc Finger domain DUF924 PF06041.11 ORF29942 - 4.4e-27 95.4 0.5 4.8e-27 95.3 0.5 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) Spore_YpjB PF09577.10 ORF29942 - 0.11 12.3 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) HTH_50 PF18024.1 ORF29310 - 0.11 12.1 0.1 0.18 11.5 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DNA_pol_delta_4 PF04081.13 ORF29178 - 0.6 10.5 8.6 0.7 10.2 8.6 1.1 1 0 0 1 1 1 0 DNA polymerase delta, subunit 4 LBP_BPI_CETP PF01273.25 ORF28116 - 0.13 11.9 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 LBP / BPI / CETP family, N-terminal domain VESA1_N PF12785.7 ORF2804 - 0.94 8.4 5.8 0.98 8.3 5.8 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 FKBP_C PF00254.28 ORF27683 - 0.0068 16.7 0.0 0.009 16.3 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase SUZ PF12752.7 ORF26310 - 0.11 13.2 0.2 0.17 12.7 0.2 1.3 1 1 0 1 1 1 0 SUZ domain Polysacc_synt_C PF14667.6 ORF25760 - 1.4e-06 28.4 1.1 1.4e-06 28.4 1.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain DUF5389 PF17364.2 ORF25760 - 0.12 12.4 3.0 0.16 12.0 3.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5389) TIG_2 PF18020.1 ORF2496 - 0.12 13.1 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 TIG domain found in plexin Asp PF00026.23 ORF24727 - 5.1e-06 26.1 0.0 5.5e-06 26.0 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease MFS_1 PF07690.16 ORF24265 - 2.3e-08 33.4 0.1 2.3e-08 33.4 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1840 PF08895.11 ORF2381 - 0.032 14.5 4.2 0.041 14.2 4.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) DUF3222 PF11519.8 ORF2340 - 0.097 12.9 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3222) Pkinase PF00069.25 ORF22810 - 6.1e-26 91.4 0.0 6.6e-26 91.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22810 - 6e-16 58.5 0.0 7.1e-16 58.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF22810 - 0.00046 19.6 0.0 0.00046 19.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF22810 - 0.04 13.3 0.2 0.049 13.0 0.2 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF22810 - 0.14 11.0 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain MAAL_C PF07476.11 ORF22284 - 0.057 12.6 0.2 0.14 11.3 0.1 1.5 1 1 1 2 2 2 0 Methylaspartate ammonia-lyase C-terminus Sulfatase PF00884.23 ORF21750 - 0.0063 16.0 0.0 0.0079 15.6 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Cnn_1N PF07989.11 ORF21724 - 0.0032 17.6 2.9 0.0049 17.0 2.9 1.3 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 UPF0242 PF06785.11 ORF21724 - 0.004 17.3 2.3 0.004 17.3 2.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus M16C_assoc PF08367.11 ORF21724 - 0.018 14.2 0.7 0.02 14.0 0.7 1.3 1 0 0 1 1 1 0 Peptidase M16C associated DUF4988 PF16378.5 ORF21724 - 0.091 12.4 1.2 0.12 12.0 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function Tab2_like PF06485.11 ORF21684 - 0.0018 17.8 0.0 0.0018 17.8 0.0 1.0 1 0 0 1 1 1 1 RNA-binding protein Tab2/Atab2 Na_K-ATPase PF00287.18 ORF21464 - 0.1 11.7 0.1 0.11 11.6 0.1 1.0 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Asp PF00026.23 ORF20474 - 2.9e-12 46.7 0.1 3.1e-12 46.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF20474 - 5e-08 33.4 0.0 5e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal PGA2 PF07543.12 ORF18607 - 0.14 12.1 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 TehB PF03848.14 ORF17904 - 1.5e-49 168.1 0.0 1.6e-49 167.9 0.0 1.0 1 0 0 1 1 1 1 Tellurite resistance protein TehB DNA_pol_delta_4 PF04081.13 ORF17886 - 0.6 10.5 8.6 0.7 10.2 8.6 1.1 1 0 0 1 1 1 0 DNA polymerase delta, subunit 4 DHHC PF01529.20 ORF17101 - 0.00057 20.0 10.8 0.00063 19.8 10.8 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase Piezo_RRas_bdg PF12166.8 ORF16871 - 6e-14 52.2 0.5 7.6e-14 51.8 0.5 1.1 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain Rif1_N PF12231.8 ORF16485 - 0.0085 15.1 0.4 0.01 14.8 0.4 1.0 1 0 0 1 1 1 1 Rap1-interacting factor 1 N terminal DUF1043 PF06295.12 ORF16485 - 0.046 13.7 3.1 0.057 13.4 3.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) Diphtheria_T PF02764.14 ORF15902 - 0.04 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Diphtheria toxin, T domain Transposase_24 PF03004.14 ORF14629 - 0.0025 17.9 0.3 0.0025 17.9 0.3 1.1 1 0 0 1 1 1 1 Plant transposase (Ptta/En/Spm family) DctQ PF04290.12 ORF14527 - 0.05 13.5 1.0 0.061 13.2 1.0 1.2 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component FOXP-CC PF16159.5 ORF14185 - 0.038 14.6 0.3 0.066 13.8 0.2 1.4 1 1 0 1 1 1 0 FOXP coiled-coil domain TetR_C_17 PF17922.1 ORF14185 - 0.062 13.4 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_Tc5 PF03221.16 ORF14185 - 0.098 12.7 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain TetR_C_11 PF16859.5 ORF14185 - 0.14 12.5 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Sec7 PF01369.20 ORF14185 - 0.15 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Sec7 domain TUSC2 PF15000.6 ORF13681 - 0.006 16.9 0.0 0.0087 16.3 0.0 1.2 1 0 0 1 1 1 1 Tumour suppressor candidate 2 T2SSE_N PF05157.15 ORF13681 - 0.049 13.9 0.1 0.086 13.1 0.1 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein E, N-terminal domain FcoT PF10862.8 ORF13521 - 0.076 12.6 1.5 0.66 9.6 0.3 2.0 1 1 1 2 2 2 0 FcoT-like thioesterase domain INCENP_N PF12178.8 ORF13521 - 0.17 11.9 0.6 0.74 9.9 0.2 2.0 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal PRIMA1 PF16101.5 ORF12729 - 0.99 9.5 2.9 0.42 10.6 1.0 1.4 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 Hypoth_Ymh PF09509.10 ORF12384 - 0.035 14.0 0.8 0.043 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) BioW PF03744.13 ORF12384 - 0.039 13.5 1.8 0.045 13.3 1.8 1.0 1 0 0 1 1 1 0 6-carboxyhexanoate--CoA ligase ASPRs PF17641.2 ORF12384 - 0.22 11.8 3.2 0.24 11.7 3.2 1.0 1 0 0 1 1 1 0 Ancylostoma-associated secreted protein related Retinal PF15449.6 ORF11616 - 0.8 7.4 6.3 0.91 7.2 6.3 1.0 1 0 0 1 1 1 0 Retinal protein Ham1p_like PF01725.16 ORF112158 - 1.6e-26 93.4 0.0 1.7e-26 93.3 0.0 1.0 1 0 0 1 1 1 1 Ham1 family DUF1378 PF07125.11 ORF111897 - 0.066 13.4 0.0 0.097 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) Ank_3 PF13606.6 ORF111523 - 4.6e-10 38.9 0.0 0.00069 19.9 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF111523 - 4.2e-08 33.7 0.0 5.5e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF111523 - 4.6e-08 33.1 0.0 0.0017 18.7 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF111523 - 1.7e-06 28.5 0.0 2.5e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF111523 - 1.7e-05 25.0 0.2 0.0049 17.1 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Caldesmon PF02029.15 ORF110455 - 0.0072 15.2 2.1 0.0079 15.0 2.1 1.0 1 0 0 1 1 1 1 Caldesmon Peripla_BP_3 PF13377.6 ORF11036 - 1.8e-25 90.2 0.0 2e-25 90.1 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF11036 - 1.1e-06 28.3 0.0 1.2e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peptidase_M56 PF05569.11 ORF110166 - 0.0032 16.7 0.2 0.0032 16.7 0.2 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 TMEM154 PF15102.6 ORF110166 - 0.039 13.9 0.3 0.043 13.7 0.3 1.1 1 0 0 1 1 1 0 TMEM154 protein family FAM209 PF15206.6 ORF110166 - 0.042 13.6 0.1 0.048 13.5 0.1 1.2 1 0 0 1 1 1 0 FAM209 family DUF2615 PF11027.8 ORF110166 - 0.12 12.5 0.2 0.16 12.1 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) ubiquitin PF00240.23 ORF109861 - 1.4e-11 44.0 0.1 1.7e-11 43.7 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF109861 - 0.0011 18.8 0.1 0.0012 18.6 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like PDEase_I PF00233.19 ORF109820 - 1e-14 54.9 0.4 1.2e-14 54.6 0.4 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Ribophorin_II PF05817.14 ORF108333 - 0.26 9.8 0.6 5.4 5.4 0.2 2.0 2 0 0 2 2 2 0 Oligosaccharyltransferase subunit Ribophorin II DUF2070 PF09843.9 ORF10773 - 0.017 13.5 12.0 0.018 13.3 12.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) IATP PF04568.12 ORF106840 - 4.9 7.6 6.9 7 7.1 6.5 1.6 1 1 1 2 2 2 0 Mitochondrial ATPase inhibitor, IATP DUF505 PF04458.12 ORF106516 - 0.12 10.7 0.0 0.13 10.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Nab2p_Zf1 PF18260.1 ORF106225 - 1.5 8.8 4.4 1.6 8.7 1.5 2.3 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 NinB PF05772.12 ORF105991 - 0.0081 16.0 0.9 0.009 15.8 0.9 1.2 1 0 0 1 1 1 1 NinB protein PetG PF02529.15 ORF105631 - 0.08 12.8 0.8 0.14 12.1 0.8 1.4 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit 5 TAXi_C PF14541.6 ORF104864 - 0.0021 17.8 0.0 0.0024 17.7 0.0 1.0 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF104864 - 0.02 14.3 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic aspartyl protease DUF4793 PF16041.5 ORF104308 - 0.026 14.7 0.1 0.053 13.7 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4793) CBM60 PF16841.5 ORF104308 - 0.15 12.5 0.0 0.19 12.1 0.0 1.1 1 0 0 1 1 1 0 Ca-dependent carbohydrate-binding module xylan-binding Cys_rich_CPCC PF14206.6 ORF104150 - 0.11 12.3 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Cysteine-rich CPCC LuxE PF04443.12 ORF104087 - 0.16 11.0 0.3 0.17 10.9 0.3 1.0 1 0 0 1 1 1 0 Acyl-protein synthetase, LuxE CCER1 PF15482.6 ORF103612 - 0.018 14.9 0.2 0.019 14.9 0.2 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 Cnn_1N PF07989.11 ORF103570 - 0.0032 17.6 2.9 0.0049 17.0 2.9 1.3 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 UPF0242 PF06785.11 ORF103570 - 0.004 17.3 2.3 0.004 17.3 2.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus M16C_assoc PF08367.11 ORF103570 - 0.018 14.2 0.7 0.02 14.0 0.7 1.3 1 0 0 1 1 1 0 Peptidase M16C associated DUF4988 PF16378.5 ORF103570 - 0.091 12.4 1.2 0.12 12.0 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function FANCI_S1-cap PF14674.6 ORF103478 - 0.045 13.8 0.1 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 FANCI solenoid 1 cap Fes1 PF08609.10 ORF103059 - 0.03 15.2 0.6 0.12 13.2 0.5 1.7 1 1 1 2 2 2 0 Nucleotide exchange factor Fes1 EF1G PF00647.19 ORF103059 - 0.033 14.2 0.3 0.039 14.0 0.3 1.1 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain DUF848 PF05852.11 ORF103059 - 0.044 13.9 0.1 0.05 13.7 0.1 1.2 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) zf-RanBP PF00641.18 ORF103059 - 0.082 12.2 0.7 0.13 11.6 0.7 1.3 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others Asp PF00026.23 ORF102840 - 0.0019 17.7 0.2 0.0021 17.5 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF102840 - 0.0038 17.5 0.1 0.005 17.1 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Arrestin_N PF00339.29 ORF102051 - 1.5e-06 28.3 0.1 1.6e-06 28.2 0.1 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Polysacc_synt_C PF14667.6 ORF102040 - 0.00067 19.7 2.0 0.00076 19.6 2.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain DUF3499 PF12005.8 ORF101944 - 0.082 13.5 0.0 0.096 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3499) RE_MamI PF09567.10 ORF101867 - 0.0058 16.3 0.3 0.0063 16.2 0.3 1.0 1 0 0 1 1 1 1 MamI restriction endonuclease TaqI_C PF12950.7 ORF101867 - 0.039 14.0 0.3 0.06 13.4 0.3 1.4 1 1 0 1 1 1 0 TaqI-like C-terminal specificity domain MIG-14_Wnt-bd PF06664.12 ORF101394 - 4.8e-13 49.0 6.0 4.9e-13 48.9 6.0 1.0 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MORN PF02493.20 ORF101054 - 0.71 9.9 8.7 0.19 11.7 3.1 2.6 2 1 1 3 3 3 0 MORN repeat YjbT PF17089.5 ORF100909 - 1e-65 217.7 0.5 1.1e-65 217.6 0.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family HemY_N PF07219.13 NODE_60731_length_271_cov_1.059322_g52791_i0forward_frame_1 - 0.0015 18.7 2.4 0.0015 18.7 2.4 1.8 2 0 0 2 2 2 1 HemY protein N-terminus ATP-synt_8 PF00895.20 NODE_60731_length_271_cov_1.059322_g52791_i0forward_frame_1 - 8 7.0 8.8 9.9 6.7 1.2 2.5 2 1 1 3 3 3 0 ATP synthase protein 8 FH2 PF02181.23 NODE_60730_length_271_cov_1.093220_g52790_i0reverse_frame_1 - 0.07 12.2 0.3 0.075 12.1 0.3 1.0 1 0 0 1 1 1 0 Formin Homology 2 Domain C2-set PF05790.15 NODE_60728_length_271_cov_1.182203_g52788_i0forward_frame_1 - 0.0014 18.8 1.1 0.0018 18.4 1.1 1.2 1 0 0 1 1 1 1 Immunoglobulin C2-set domain DUF2633 PF11119.8 NODE_60722_length_271_cov_1.347458_g52782_i0forward_frame_1 - 0.2 11.6 1.7 0.3 11.0 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) HisKA_3 PF07730.13 NODE_60721_length_271_cov_1.351695_g52781_i0forward_frame_1 - 0.097 13.2 0.1 0.12 12.9 0.1 1.1 1 0 0 1 1 1 0 Histidine kinase Dynein_attach_N PF15867.5 NODE_60714_length_271_cov_1.508475_g52774_i0forward_frame_1 - 0.099 12.6 0.1 0.15 12.0 0.1 1.2 1 0 0 1 1 1 0 Dynein attachment factor N-terminus AAA_9 PF12781.7 NODE_60709_length_271_cov_1.673729_g52769_i0reverse_frame_1 - 1e-32 113.1 0.2 1.1e-32 113.0 0.2 1.0 1 0 0 1 1 1 1 ATP-binding dynein motor region GGA_N-GAT PF18308.1 NODE_60709_length_271_cov_1.673729_g52769_i0reverse_frame_1 - 0.12 12.1 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 GGA N-GAT domain MORN PF02493.20 NODE_60706_length_271_cov_1.711864_g52766_i0forward_frame_1 - 6.7e-07 28.8 3.2 0.063 13.2 0.6 3.7 3 1 0 3 3 3 3 MORN repeat 53-BP1_Tudor PF09038.10 NODE_60706_length_271_cov_1.711864_g52766_i0forward_frame_1 - 0.0042 17.0 0.6 0.0075 16.2 0.2 1.6 1 1 1 2 2 2 1 Tumour suppressor p53-binding protein-1 Tudor Bcr-Abl_Oligo PF09036.10 NODE_60701_length_271_cov_1.822034_g52761_i0reverse_frame_1 - 1.8 8.6 6.2 2.2 8.3 3.6 2.2 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain DUF743 PF05332.11 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_1 - 0.034 14.2 1.0 0.14 12.2 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF743) Androgen_recep PF02166.16 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_1 - 3.8 6.3 4.7 4.5 6.0 4.7 1.1 1 0 0 1 1 1 0 Androgen receptor TAF PF02969.17 NODE_60698_length_271_cov_1.894068_g52758_i0forward_frame_1 - 0.053 13.7 0.0 0.087 13.0 0.0 1.3 1 0 0 1 1 1 0 TATA box binding protein associated factor (TAF) Sec62 PF03839.16 NODE_60693_length_271_cov_2.059322_g52753_i0forward_frame_1 - 0.065 12.7 0.0 0.07 12.6 0.0 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 HTH_28 PF13518.6 NODE_60693_length_271_cov_2.059322_g52753_i0forward_frame_1 - 0.16 12.1 0.1 0.28 11.3 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 NODE_60693_length_271_cov_2.059322_g52753_i0forward_frame_1 - 0.18 11.9 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Antimicrobial19 PF08225.11 NODE_60692_length_271_cov_2.072034_g52752_i0reverse_frame_1 - 0.067 12.8 0.0 0.13 11.9 0.0 1.5 1 0 0 1 1 1 0 Pseudin antimicrobial peptide Rxt3 PF08642.10 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 0.0076 17.0 0.2 0.0094 16.7 0.2 1.1 1 0 0 1 1 1 1 Histone deacetylation protein Rxt3 Thg1C PF14413.6 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 0.015 15.5 2.4 0.018 15.2 2.4 1.0 1 0 0 1 1 1 0 Thg1 C terminal domain DUF4834 PF16118.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 0.063 14.3 0.7 0.07 14.1 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Folate_carrier PF01770.18 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 0.43 9.3 1.1 0.48 9.1 1.1 1.0 1 0 0 1 1 1 0 Reduced folate carrier Peptidase_S49_N PF08496.10 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 2.2 8.3 4.3 2.6 8.1 4.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Dicty_REP PF05086.12 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 4.2 5.2 10.2 4.1 5.2 10.2 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Aminotran_1_2 PF00155.21 NODE_60686_length_271_cov_2.173729_g52746_i0forward_frame_1 - 1.1e-07 31.3 0.0 1.4e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II RRM PF10378.9 NODE_60685_length_271_cov_2.182203_g52745_i0forward_frame_1 - 0.014 15.1 0.2 0.024 14.3 0.2 1.4 1 0 0 1 1 1 0 Putative RRM domain DUF4723 PF15851.5 NODE_60681_length_271_cov_2.377119_g52741_i0forward_frame_1 - 0.043 14.0 0.8 0.055 13.6 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4723) COX15-CtaA PF02628.15 NODE_60680_length_271_cov_2.461864_g52740_i0reverse_frame_1 - 0.0025 16.9 0.0 0.0026 16.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein E1-N PF14463.6 NODE_60676_length_271_cov_2.525424_g52736_i0forward_frame_1 - 0.043 13.6 0.4 0.052 13.4 0.4 1.1 1 0 0 1 1 1 0 E1 N-terminal domain CDtoxinA PF03498.14 NODE_60670_length_271_cov_2.868644_g52730_i0reverse_frame_1 - 0.14 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Cytolethal distending toxin A/C domain Chordopox_A35R PF05989.12 NODE_60664_length_271_cov_4.207627_g52724_i0reverse_frame_1 - 0.058 13.3 0.3 0.13 12.2 0.2 1.6 1 1 1 2 2 2 0 Chordopoxvirus A35R protein Kelch_4 PF13418.6 NODE_60664_length_271_cov_4.207627_g52724_i0forward_frame_1 - 0.00061 19.7 0.0 0.001 19.1 0.0 1.4 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_60664_length_271_cov_4.207627_g52724_i0forward_frame_1 - 0.0098 15.5 0.0 0.013 15.0 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 NODE_60664_length_271_cov_4.207627_g52724_i0forward_frame_1 - 0.023 15.0 0.0 0.031 14.6 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain Gln-synt_C-ter PF18318.1 NODE_60660_length_271_cov_5.656780_g52720_i0reverse_frame_1 - 0.0045 16.8 0.2 0.005 16.7 0.2 1.1 1 0 0 1 1 1 1 Glutamine synthetase C-terminal domain DapB_N PF01113.20 NODE_60660_length_271_cov_5.656780_g52720_i0reverse_frame_1 - 0.03 14.4 0.1 0.035 14.2 0.1 1.1 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus HemY_N PF07219.13 NODE_60654_length_271_cov_42.673729_g52714_i0forward_frame_1 - 0.092 12.9 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 HemY protein N-terminus SR-25 PF10500.9 NODE_60651_length_271_cov_49.313559_g52711_i0forward_frame_1 - 0.1 12.2 6.5 0.11 12.1 6.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein IPK PF03770.16 NODE_60648_length_271_cov_50.512712_g52708_i0reverse_frame_1 - 0.076 12.9 0.1 0.08 12.8 0.1 1.2 1 0 0 1 1 1 0 Inositol polyphosphate kinase Kelch_3 PF13415.6 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 5.3e-09 36.1 1.1 9.7e-09 35.3 0.8 1.5 1 1 1 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 8.2e-07 28.9 0.2 1.1e-05 25.4 0.3 2.0 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 9.6e-05 22.3 0.5 0.01 15.8 0.1 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 0.00015 22.0 0.2 0.00022 21.4 0.2 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 0.00036 20.1 0.3 0.00036 20.1 0.3 1.5 2 0 0 2 2 2 1 Kelch motif GRIM-19 PF06212.12 NODE_60637_length_271_cov_62.046610_g52697_i0forward_frame_1 - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 GRIM-19 protein BIRC6 PF12356.8 NODE_60632_length_271_cov_67.309322_g52692_i0reverse_frame_1 - 0.13 11.6 0.2 0.16 11.3 0.2 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 zf-XS PF03470.14 NODE_60631_length_271_cov_73.254237_g52691_i0reverse_frame_1 - 0.058 13.7 0.0 0.058 13.7 0.0 2.2 2 0 0 2 2 2 0 XS zinc finger domain Peptidase_S49_N PF08496.10 NODE_60630_length_271_cov_77.152542_g52690_i0reverse_frame_1 - 0.056 13.5 6.1 0.061 13.4 6.1 1.2 1 1 0 1 1 1 0 Peptidase family S49 N-terminal Pox_Ag35 PF03286.14 NODE_60630_length_271_cov_77.152542_g52690_i0reverse_frame_1 - 0.24 11.2 9.9 0.28 10.9 9.9 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein EMC3_TMCO1 PF01956.16 NODE_60630_length_271_cov_77.152542_g52690_i0reverse_frame_1 - 0.35 10.6 1.8 0.39 10.4 1.8 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like COesterase PF00135.28 NODE_60624_length_271_cov_94.847458_g52684_i0reverse_frame_1 - 0.12 11.3 0.7 0.15 10.9 0.7 1.1 1 0 0 1 1 1 0 Carboxylesterase family B_solenoid_dext PF18841.1 NODE_60623_length_271_cov_99.042373_g52683_i0reverse_frame_1 - 0.09 13.1 0.8 0.16 12.3 0.8 1.4 1 0 0 1 1 1 0 Beta solenoid repeat from Dextranase CCDC106 PF15794.5 NODE_60623_length_271_cov_99.042373_g52683_i0reverse_frame_1 - 3 7.5 17.6 4.3 7.0 17.6 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 YWFCY PF14293.6 NODE_60613_length_271_cov_165.271186_g52673_i0forward_frame_1 - 0.26 11.6 4.2 0.42 11.0 4.2 1.2 1 0 0 1 1 1 0 YWFCY protein Skp1 PF01466.19 NODE_60609_length_271_cov_311.177966_g52669_i0reverse_frame_1 - 0.18 12.0 0.1 0.24 11.6 0.1 1.2 1 0 0 1 1 1 0 Skp1 family, dimerisation domain ORMDL PF04061.14 NODE_60608_length_271_cov_332.843220_g52668_i0forward_frame_1 - 0.0093 15.8 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 ORMDL family DUF2633 PF11119.8 NODE_60602_length_271_cov_81529.114407_g52662_i0reverse_frame_1 - 0.95 9.4 3.4 1.4 8.9 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) DUF4404 PF14357.6 NODE_60599_length_272_cov_1.130802_g52659_i0forward_frame_1 - 0.022 15.4 0.4 0.03 15.0 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) DUF2956 PF11169.8 NODE_60594_length_272_cov_1.265823_g52654_i0reverse_frame_1 - 0.039 14.1 0.1 0.044 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2956) DUF2292 PF10055.9 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_1 - 0.053 13.2 0.0 0.075 12.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized small protein (DUF2292) Inhibitor_I68 PF10468.9 NODE_60590_length_272_cov_1.333333_g52650_i0reverse_frame_1 - 0.14 12.6 0.9 0.26 11.7 0.1 1.8 2 0 0 2 2 2 0 Carboxypeptidase inhibitor I68 DUF1322 PF07032.11 NODE_60586_length_272_cov_1.396624_g52646_i0reverse_frame_1 - 0.04 14.4 0.6 0.04 14.4 0.6 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1322) Papilloma_E5 PF03025.14 NODE_60586_length_272_cov_1.396624_g52646_i0forward_frame_1 - 0.52 10.5 12.9 1.5 9.0 5.7 2.2 1 1 1 2 2 2 0 Papillomavirus E5 F-box_5 PF18511.1 NODE_60578_length_272_cov_1.523207_g52638_i0reverse_frame_1 - 0.0013 18.3 0.2 0.0021 17.6 0.2 1.3 1 0 0 1 1 1 1 F-box HTH_ABP1_N PF18107.1 NODE_60576_length_272_cov_1.594937_g52636_i0forward_frame_1 - 0.0075 16.0 0.8 0.55 10.0 0.1 2.1 2 0 0 2 2 2 2 Fission yeast centromere protein N-terminal domain zf_CopZ PF18423.1 NODE_60573_length_272_cov_1.607595_g52633_i0forward_frame_1 - 0.12 12.3 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Zinc binding domain UPF0547 PF10571.9 NODE_60564_length_272_cov_1.729958_g52624_i0forward_frame_1 - 0.012 15.7 0.2 0.027 14.5 0.2 1.6 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 NODE_60564_length_272_cov_1.729958_g52624_i0forward_frame_1 - 0.031 13.7 0.4 0.047 13.1 0.4 1.3 1 0 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 NODE_60564_length_272_cov_1.729958_g52624_i0forward_frame_1 - 0.05 13.1 0.2 0.073 12.6 0.2 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding cNMP_binding PF00027.29 NODE_60563_length_272_cov_1.738397_g52623_i0reverse_frame_1 - 4.4e-16 58.7 0.0 5.3e-16 58.5 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain ID PF18543.1 NODE_60563_length_272_cov_1.738397_g52623_i0reverse_frame_1 - 0.023 14.7 0.1 0.05 13.6 0.0 1.5 2 0 0 2 2 2 0 Intracellular delivery domain Cupin_1 PF00190.22 NODE_60563_length_272_cov_1.738397_g52623_i0reverse_frame_1 - 0.11 12.1 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Cupin DUF3678 PF12435.8 NODE_60557_length_272_cov_1.856540_g52617_i0reverse_frame_1 - 0.026 13.9 0.2 0.062 12.7 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) ASH PF15780.5 NODE_60557_length_272_cov_1.856540_g52617_i0forward_frame_1 - 0.0043 17.2 0.1 0.0059 16.8 0.1 1.3 1 0 0 1 1 1 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks261.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks261.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks261.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks261.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4296 PF14129.6 NODE_60541_length_272_cov_2.143460_g52601_i0reverse_frame_1 - 0.05 14.2 4.8 0.072 13.7 4.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4296) WD40 PF00400.32 NODE_60540_length_272_cov_2.151899_g52600_i0reverse_frame_1 - 6e-06 26.9 0.1 9.5e-06 26.3 0.1 1.3 1 0 0 1 1 1 1 WD domain, G-beta repeat NPA PF16469.5 NODE_60540_length_272_cov_2.151899_g52600_i0reverse_frame_1 - 0.014 16.0 3.8 0.017 15.7 3.8 1.1 1 0 0 1 1 1 0 Nematode polyprotein allergen ABA-1 DUF5552 PF17706.1 NODE_60528_length_272_cov_2.978903_g52588_i0forward_frame_1 - 0.017 14.9 0.0 0.02 14.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5552) RCC1_2 PF13540.6 NODE_60523_length_272_cov_3.502110_g52583_i0forward_frame_1 - 0.0022 17.7 0.3 0.13 12.1 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Hs1pro-1_C PF07014.12 NODE_60518_length_272_cov_4.413502_g52578_i0reverse_frame_1 - 0.041 13.4 0.0 0.041 13.4 0.0 1.1 1 0 0 1 1 1 0 Hs1pro-1 protein C-terminus LptD PF04453.14 NODE_60518_length_272_cov_4.413502_g52578_i0reverse_frame_1 - 0.085 12.1 0.0 0.09 12.0 0.0 1.0 1 0 0 1 1 1 0 LPS transport system D DUF692 PF05114.13 NODE_60514_length_272_cov_27.008439_g52574_i0forward_frame_1 - 0.035 13.3 0.0 0.035 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF692) zf-CW PF07496.15 NODE_60511_length_272_cov_35.658228_g52571_i0forward_frame_1 - 0.081 13.0 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 CW-type Zinc Finger RB_A PF01858.17 NODE_60507_length_272_cov_41.746835_g52567_i0reverse_frame_1 - 0.017 14.9 0.5 0.018 14.9 0.5 1.0 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain NCOA_u2 PF16665.5 NODE_60507_length_272_cov_41.746835_g52567_i0forward_frame_1 - 0.034 14.5 1.8 0.038 14.3 1.8 1.1 1 0 0 1 1 1 0 Unstructured region on nuclear receptor coactivator protein PH_17 PF18012.1 NODE_60503_length_272_cov_46.303797_g52563_i0forward_frame_1 - 0.039 13.7 0.4 0.061 13.0 0.4 1.3 1 0 0 1 1 1 0 PH domain Clr2 PF10383.9 NODE_60498_length_272_cov_50.928270_g52558_i0forward_frame_1 - 0.13 13.1 0.0 0.13 13.0 0.0 1.1 1 0 0 1 1 1 0 Transcription-silencing protein Clr2 Pyr_redox PF00070.27 NODE_60495_length_272_cov_53.945148_g52555_i0forward_frame_1 - 0.0026 18.3 0.0 0.005 17.4 0.0 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pullulanase_Ins PF18494.1 NODE_60493_length_272_cov_59.426160_g52553_i0reverse_frame_1 - 0.083 13.4 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 Pullulanase Ins domain C4 PF01413.19 NODE_60487_length_272_cov_63.987342_g52547_i0forward_frame_1 - 0.036 14.4 0.0 0.044 14.2 0.0 1.2 1 0 0 1 1 1 0 C-terminal tandem repeated domain in type 4 procollagen Plant_zn_clust PF10533.9 NODE_60485_length_272_cov_66.902954_g52545_i0reverse_frame_1 - 0.0082 16.1 3.3 0.0082 16.1 3.3 2.1 2 0 0 2 2 2 1 Plant zinc cluster domain Apolipoprotein PF01442.18 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.0029 17.5 0.4 0.0034 17.3 0.4 1.1 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain Ground-like PF04155.18 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.0055 17.3 0.2 0.022 15.4 0.1 1.9 1 1 1 2 2 2 1 Ground-like domain PriC PF07445.12 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.0067 16.4 0.4 0.0075 16.2 0.4 1.2 1 0 0 1 1 1 1 Primosomal replication protein priC DUF948 PF06103.11 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.02 15.2 0.6 0.48 10.7 0.6 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Peptidase_M75 PF09375.10 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.065 12.7 0.0 0.077 12.5 0.0 1.1 1 0 0 1 1 1 0 Imelysin DUF465 PF04325.13 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.29 11.2 4.5 0.28 11.2 2.4 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF465) FNIP PF05725.12 NODE_60476_length_272_cov_89.746835_g52536_i0reverse_frame_1 - 1.9e-08 34.3 1.8 2.8e-08 33.8 1.8 1.2 1 0 0 1 1 1 1 FNIP Repeat O-antigen_lig PF13425.6 NODE_60466_length_272_cov_122.717300_g52526_i0reverse_frame_1 - 0.0048 15.7 0.9 0.0055 15.6 0.9 1.1 1 0 0 1 1 1 1 O-antigen ligase like membrane protein Sipho_Gp157 PF05565.11 NODE_60466_length_272_cov_122.717300_g52526_i0reverse_frame_1 - 0.0094 16.0 3.8 0.011 15.7 3.8 1.2 1 0 0 1 1 1 1 Siphovirus Gp157 DUF2852 PF11014.8 NODE_60464_length_272_cov_122.810127_g52524_i0reverse_frame_1 - 0.17 12.0 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) Cytochrom_B559 PF00283.19 NODE_60453_length_272_cov_2527.691983_g52513_i0reverse_frame_1 - 2e-14 52.7 5.4 2.6e-14 52.3 5.4 1.2 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits RNase_T PF00929.24 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_1 - 0.013 16.1 1.8 0.013 16.0 1.8 1.0 1 0 0 1 1 1 0 Exonuclease PHM7_cyt PF14703.6 NODE_60448_length_273_cov_1.004202_g52508_i0forward_frame_1 - 0.015 15.5 3.7 0.016 15.5 3.7 1.0 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Phe_ZIP PF08916.11 NODE_60448_length_273_cov_1.004202_g52508_i0forward_frame_1 - 0.051 14.3 4.1 0.66 10.7 1.5 2.1 1 1 1 2 2 2 0 Phenylalanine zipper RRP14 PF15459.6 NODE_60448_length_273_cov_1.004202_g52508_i0forward_frame_1 - 0.4 11.3 8.0 0.87 10.2 8.0 1.5 1 1 0 1 1 1 0 60S ribosome biogenesis protein Rrp14 PHD PF00628.29 NODE_60444_length_273_cov_1.088235_g52504_i0reverse_frame_1 - 0.11 12.4 1.1 9.8 6.2 0.2 2.2 2 0 0 2 2 2 0 PHD-finger Gon7 PF08738.10 NODE_60440_length_273_cov_1.168067_g52500_i0forward_frame_1 - 0.075 13.1 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 Gon7 family Topo_Zn_Ribbon PF08272.11 NODE_60437_length_273_cov_1.302521_g52497_i0forward_frame_1 - 0.19 11.4 0.1 0.27 10.9 0.1 1.2 1 0 0 1 1 1 0 Topoisomerase I zinc-ribbon-like DUF5000 PF16391.5 NODE_60435_length_273_cov_1.331933_g52495_i0reverse_frame_1 - 0.086 13.0 0.4 0.092 12.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function p450 PF00067.22 NODE_60427_length_273_cov_1.453782_g52487_i0reverse_frame_1 - 4.7e-07 28.9 0.0 4.9e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 UPF0220 PF05255.11 NODE_60427_length_273_cov_1.453782_g52487_i0reverse_frame_1 - 0.16 11.5 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) Med31 PF05669.12 NODE_60418_length_273_cov_1.634454_g52478_i0forward_frame_1 - 0.12 12.4 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 SOH1 MNSV_P7B PF06692.11 NODE_60417_length_273_cov_1.668067_g52477_i0reverse_frame_1 - 3.8 7.6 8.5 0.42 10.6 1.8 2.5 2 1 1 3 3 3 0 Melon necrotic spot virus P7B protein Spc24 PF08286.11 NODE_60415_length_273_cov_1.680672_g52475_i0forward_frame_1 - 0.042 14.1 0.7 0.046 14.0 0.7 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 BBIP10 PF14777.6 NODE_60414_length_273_cov_1.701681_g52474_i0reverse_frame_1 - 0.08 12.5 0.4 0.12 11.9 0.4 1.2 1 0 0 1 1 1 0 Cilia BBSome complex subunit 10 YrhK PF14145.6 NODE_60399_length_273_cov_1.873950_g52459_i0forward_frame_1 - 0.14 12.0 3.2 0.16 11.9 0.1 2.2 2 1 0 2 2 2 0 YrhK-like protein TMEM208_SND2 PF05620.11 NODE_60397_length_273_cov_1.970588_g52457_i0reverse_frame_1 - 9.4 6.0 12.9 14 5.4 12.9 1.4 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 AgrB PF04647.15 NODE_60394_length_273_cov_1.983193_g52454_i0reverse_frame_1 - 0.081 12.2 1.6 0.086 12.1 1.6 1.0 1 0 0 1 1 1 0 Accessory gene regulator B ATG22 PF11700.8 NODE_60393_length_273_cov_2.054622_g52453_i0reverse_frame_1 - 0.00026 19.7 2.3 0.0003 19.6 2.3 1.0 1 0 0 1 1 1 1 Vacuole effluxer Atg22 like DUF3290 PF11694.8 NODE_60393_length_273_cov_2.054622_g52453_i0reverse_frame_1 - 0.021 14.8 1.6 0.026 14.5 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DUF1290 PF06947.12 NODE_60393_length_273_cov_2.054622_g52453_i0reverse_frame_1 - 0.064 13.4 2.0 0.081 13.0 1.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1290) Gp_dh_C PF02800.20 NODE_60391_length_273_cov_2.096639_g52451_i0reverse_frame_1 - 0.00053 19.6 0.0 0.00073 19.2 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Herpes_UL24 PF01646.16 NODE_60390_length_273_cov_2.117647_g52450_i0forward_frame_1 - 0.022 14.7 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 Herpes virus proteins UL24 and UL76 cNMP_binding PF00027.29 NODE_60369_length_273_cov_3.298319_g52429_i0reverse_frame_1 - 1.6e-07 31.3 0.1 1.2e-05 25.3 0.1 2.1 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain DUF5363 PF17320.2 NODE_60366_length_273_cov_3.449580_g52426_i0reverse_frame_1 - 0.061 13.2 0.3 0.76 9.7 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5363) Shisa PF13908.6 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_1 - 0.13 12.5 4.3 0.15 12.3 4.3 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF3043 PF11241.8 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_1 - 4.4 7.3 5.6 4.8 7.2 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF2207 PF09972.9 NODE_60363_length_273_cov_4.432773_g52423_i0reverse_frame_1 - 0.38 9.5 0.7 0.36 9.5 0.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TMEM208_SND2 PF05620.11 NODE_60363_length_273_cov_4.432773_g52423_i0forward_frame_1 - 0.042 13.6 0.7 0.069 12.9 0.6 1.5 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 IL3Ra_N PF18611.1 NODE_60363_length_273_cov_4.432773_g52423_i0forward_frame_1 - 0.17 11.9 4.8 0.25 11.3 4.8 1.4 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain YibE_F PF07907.11 NODE_60350_length_273_cov_41.189076_g52410_i0forward_frame_1 - 0.022 14.2 1.0 0.027 14.0 1.0 1.0 1 0 0 1 1 1 0 YibE/F-like protein Peptidase_A24 PF01478.18 NODE_60350_length_273_cov_41.189076_g52410_i0forward_frame_1 - 0.064 13.7 2.5 0.079 13.4 2.5 1.1 1 0 0 1 1 1 0 Type IV leader peptidase family DUF5414 PF17435.2 NODE_60341_length_273_cov_60.205882_g52401_i0forward_frame_1 - 0.091 12.4 0.7 7.7 6.1 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5414) Nod_GRP PF07806.11 NODE_60337_length_273_cov_68.315126_g52397_i0reverse_frame_1 - 0.7 9.8 17.6 0.62 9.9 10.4 2.5 1 1 1 2 2 2 0 Nodule-specific GRP repeat PepSY_TM PF03929.16 NODE_60337_length_273_cov_68.315126_g52397_i0forward_frame_1 - 0.024 14.3 0.1 0.026 14.2 0.1 1.1 1 0 0 1 1 1 0 PepSY-associated TM region TRAM1 PF08390.11 NODE_60331_length_273_cov_85.848739_g52391_i0reverse_frame_1 - 0.41 10.3 3.2 0.54 10.0 3.2 1.2 1 0 0 1 1 1 0 TRAM1-like protein DUF5084 PF16894.5 NODE_60328_length_273_cov_91.247899_g52388_i0forward_frame_1 - 1.1 9.7 6.4 0.79 10.2 1.7 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5084) ubiquitin PF00240.23 NODE_60325_length_273_cov_105.247899_g52385_i0reverse_frame_1 - 0.14 11.9 0.5 0.2 11.4 0.5 1.4 1 1 0 1 1 1 0 Ubiquitin family TFIIB_C_1 PF18542.1 NODE_60324_length_273_cov_106.500000_g52384_i0reverse_frame_1 - 0.086 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 CarbpepA_inh PF02977.15 NODE_60323_length_273_cov_129.247899_g52383_i0reverse_frame_1 - 0.03 14.1 0.1 0.05 13.4 0.1 1.3 1 0 0 1 1 1 0 Carboxypeptidase A inhibitor DUF2975 PF11188.8 NODE_60316_length_273_cov_176.079832_g52376_i0reverse_frame_1 - 0.15 11.9 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) EPF PF17181.4 NODE_60316_length_273_cov_176.079832_g52376_i0reverse_frame_1 - 0.25 11.4 1.9 0.33 11.0 0.3 1.8 1 1 1 2 2 2 0 Epidermal patterning factor proteins DUF2207 PF09972.9 NODE_60306_length_273_cov_1907.680672_g52366_i0reverse_frame_1 - 0.54 9.0 5.9 0.63 8.7 5.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) RCR PF12273.8 NODE_60306_length_273_cov_1907.680672_g52366_i0reverse_frame_1 - 3.4 8.3 5.6 0.37 11.4 0.8 1.7 1 1 1 2 2 2 0 Chitin synthesis regulation, resistance to Congo red Ndc1_Nup PF09531.10 NODE_60300_length_274_cov_1.075314_g52360_i0forward_frame_2 - 0.28 9.8 4.6 0.31 9.7 4.6 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup SHNi-TPR PF10516.9 NODE_60293_length_274_cov_1.414226_g52353_i0reverse_frame_2 - 0.19 11.2 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 SHNi-TPR Sec23_trunk PF04811.15 NODE_60291_length_274_cov_1.451883_g52351_i0forward_frame_3 - 1.9e-09 37.5 0.1 2.2e-09 37.3 0.1 1.1 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain CSTF_C PF14304.6 NODE_60291_length_274_cov_1.451883_g52351_i0forward_frame_3 - 0.034 13.7 0.0 0.047 13.3 0.0 1.2 1 0 0 1 1 1 0 Transcription termination and cleavage factor C-terminal DUF29 PF01724.16 NODE_60289_length_274_cov_1.502092_g52349_i0forward_frame_2 - 0.031 14.5 0.5 0.038 14.2 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF29 Chordopox_E11 PF06138.12 NODE_60287_length_274_cov_1.506276_g52347_i0reverse_frame_2 - 0.0047 17.2 0.2 0.0049 17.2 0.2 1.1 1 0 0 1 1 1 1 Chordopoxvirus E11 protein p450 PF00067.22 NODE_60286_length_274_cov_1.569038_g52346_i0reverse_frame_2 - 1.7e-11 43.6 0.0 2.1e-11 43.3 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Choline_transpo PF04515.12 NODE_60286_length_274_cov_1.569038_g52346_i0reverse_frame_2 - 0.022 14.0 0.1 0.045 12.9 0.1 1.5 1 1 0 1 1 1 0 Plasma-membrane choline transporter Imm30 PF15565.6 NODE_60286_length_274_cov_1.569038_g52346_i0reverse_frame_2 - 0.029 14.4 0.0 0.035 14.2 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 30 Terminase_5 PF06056.12 NODE_60283_length_274_cov_1.623431_g52343_i0forward_frame_3 - 0.11 12.4 0.6 0.28 11.1 0.1 2.0 2 1 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) Peptidase_M16_C PF05193.21 NODE_60282_length_274_cov_1.635983_g52342_i0forward_frame_3 - 1.3e-05 25.3 0.0 1.4e-05 25.1 0.0 1.0 1 0 0 1 1 1 1 Peptidase M16 inactive domain VHS PF00790.19 NODE_60282_length_274_cov_1.635983_g52342_i0forward_frame_2 - 0.014 15.3 0.1 0.02 14.8 0.1 1.2 1 0 0 1 1 1 0 VHS domain Rick_17kDa_Anti PF05433.15 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_3 - 3e-06 27.0 18.8 4.5e-06 26.4 18.8 1.3 1 0 0 1 1 1 1 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_3 - 0.00067 19.6 15.0 0.00089 19.2 15.0 1.2 1 0 0 1 1 1 1 Glycine zipper DUF2076 PF09849.9 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_3 - 0.12 12.5 9.2 0.21 11.6 9.2 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Gly-zipper_YMGG PF13441.6 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_3 - 0.73 9.6 18.5 1.1 9.1 18.5 1.2 1 0 0 1 1 1 0 YMGG-like Gly-zipper Holin_BlyA PF05102.12 NODE_60279_length_274_cov_1.682008_g52339_i0forward_frame_3 - 0.059 13.3 0.3 0.1 12.6 0.3 1.6 1 1 0 1 1 1 0 holin, BlyA family DUF640 PF04852.12 NODE_60278_length_274_cov_1.711297_g52338_i0reverse_frame_3 - 0.062 13.5 0.1 0.075 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF640) DUF3979 PF13141.6 NODE_60277_length_274_cov_1.719665_g52337_i0reverse_frame_3 - 0.059 13.6 0.7 0.072 13.4 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) ARL2_Bind_BART PF11527.8 NODE_60277_length_274_cov_1.719665_g52337_i0reverse_frame_2 - 0.02 15.0 1.0 0.027 14.6 1.0 1.3 1 0 0 1 1 1 0 The ARF-like 2 binding protein BART RSN1_7TM PF02714.15 NODE_60268_length_274_cov_1.962343_g52328_i0reverse_frame_3 - 0.00028 20.3 1.0 0.00032 20.1 1.0 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate TMC PF07810.13 NODE_60268_length_274_cov_1.962343_g52328_i0reverse_frame_3 - 0.0089 16.6 0.1 0.01 16.4 0.1 1.1 1 0 0 1 1 1 1 TMC domain Rap1-DNA-bind PF09197.10 NODE_60268_length_274_cov_1.962343_g52328_i0forward_frame_3 - 0.078 13.6 0.4 0.092 13.3 0.4 1.1 1 0 0 1 1 1 0 Rap1, DNA-binding RRXRR PF14239.6 NODE_60267_length_274_cov_2.158996_g52327_i0forward_frame_2 - 1.1 9.1 8.2 1.2 9.0 8.2 1.1 1 0 0 1 1 1 0 RRXRR protein DUF4618 PF15397.6 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.012 15.0 9.0 0.018 14.4 9.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) SF3A3 PF16837.5 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.022 15.3 0.4 0.028 14.9 0.4 1.2 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 Fe-ADH PF00465.19 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.033 13.0 0.1 0.039 12.8 0.1 1.1 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase DUF2205 PF10224.9 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.043 13.8 3.6 0.92 9.5 0.1 2.2 2 1 0 2 2 2 0 Short coiled-coil protein CorA PF01544.18 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.14 11.5 1.8 0.16 11.2 1.8 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF4413 PF14372.6 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.15 12.4 3.5 0.79 10.1 0.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4413) DUF5082 PF16888.5 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.17 12.2 6.4 0.2 12.0 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) FapA PF03961.13 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.46 9.0 4.8 0.38 9.3 3.0 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A DUF1151 PF06625.11 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.71 9.8 7.4 3.1 7.8 0.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1151) AAA_12 PF13087.6 NODE_60261_length_274_cov_2.322176_g52321_i0forward_frame_3 - 0.012 15.2 1.8 0.015 14.9 1.8 1.1 1 0 0 1 1 1 0 AAA domain DUF3452 PF11934.8 NODE_60253_length_274_cov_2.527197_g52313_i0reverse_frame_3 - 0.032 13.8 0.2 0.033 13.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) GNVR PF13807.6 NODE_60253_length_274_cov_2.527197_g52313_i0forward_frame_3 - 1.1e-25 89.3 0.3 1.4e-25 89.0 0.3 1.1 1 0 0 1 1 1 1 G-rich domain on putative tyrosine kinase TOM13 PF08219.11 NODE_60253_length_274_cov_2.527197_g52313_i0forward_frame_3 - 0.064 13.2 0.0 0.085 12.8 0.0 1.3 1 0 0 1 1 1 0 Outer membrane protein TOM13 DUF1932 PF09130.11 NODE_60252_length_274_cov_2.539749_g52312_i0forward_frame_3 - 0.17 11.9 0.1 0.29 11.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) DUF3440 PF11922.8 NODE_60249_length_274_cov_2.673640_g52309_i0reverse_frame_3 - 0.14 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) tRNA-synt_2d PF01409.20 NODE_60245_length_274_cov_2.815900_g52305_i0reverse_frame_2 - 1.2e-34 119.9 0.0 1.3e-34 119.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Pro_sub2 PF18513.1 NODE_60244_length_274_cov_2.874477_g52304_i0forward_frame_2 - 0.097 12.9 0.1 0.13 12.4 0.1 1.4 1 1 0 1 1 1 0 Prodomain subtilisin 2 Rota_NS53 PF00981.17 NODE_60243_length_274_cov_2.899582_g52303_i0forward_frame_2 - 0.0095 14.9 0.4 0.011 14.7 0.4 1.0 1 0 0 1 1 1 1 Rotavirus RNA-binding Protein 53 (NS53) DUF1027 PF06265.11 NODE_60241_length_274_cov_2.916318_g52301_i0forward_frame_2 - 0.00076 19.4 0.2 0.011 15.7 0.0 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF1027) TrbM PF07424.11 NODE_60240_length_274_cov_2.941423_g52300_i0reverse_frame_2 - 0.69 9.9 4.2 0.81 9.6 4.2 1.1 1 0 0 1 1 1 0 TrbM DUF2625 PF10946.8 NODE_60236_length_274_cov_3.175732_g52296_i0reverse_frame_3 - 5.1e-34 117.2 0.0 5.5e-34 117.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF2625 YrhC PF14143.6 NODE_60235_length_274_cov_3.205021_g52295_i0forward_frame_2 - 0.082 13.0 1.7 0.093 12.8 0.3 1.8 1 1 1 2 2 2 0 YrhC-like protein tRNA-synt_His PF13393.6 NODE_60234_length_274_cov_3.242678_g52294_i0forward_frame_3 - 0.2 10.9 0.1 0.22 10.8 0.1 1.0 1 0 0 1 1 1 0 Histidyl-tRNA synthetase DUF2673 PF10880.8 NODE_60233_length_274_cov_3.309623_g52293_i0reverse_frame_3 - 0.068 13.3 0.1 0.083 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2673) Complex1_30kDa PF00329.19 NODE_60231_length_274_cov_3.569038_g52291_i0forward_frame_3 - 0.00033 21.3 0.0 0.0004 21.0 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit N_BRCA1_IG PF16158.5 NODE_60223_length_274_cov_8.393305_g52283_i0reverse_frame_2 - 0.00017 22.3 0.0 0.00023 21.9 0.0 1.2 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene RNA_pol_3_Rpc31 PF11705.8 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.023 15.0 5.1 0.028 14.7 5.1 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 Uso1_p115_C PF04871.13 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.049 14.0 2.2 0.057 13.8 2.2 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Tweety PF04906.13 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.16 10.6 1.2 0.18 10.5 1.2 1.0 1 0 0 1 1 1 0 Tweety PdaC PF13739.6 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.27 12.3 3.7 0.35 11.9 3.8 1.3 1 1 0 1 1 1 0 Deacetylase PdaC LMBR1 PF04791.16 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.74 8.6 4.3 0.79 8.6 4.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein YSIRK_signal PF04650.17 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 2.3 8.1 6.0 12 5.9 0.6 2.6 2 0 0 2 2 2 0 YSIRK type signal peptide Oxidored_q2 PF00420.24 NODE_60222_length_274_cov_23.866109_g52282_i0forward_frame_2 - 0.46 10.1 9.4 0.044 13.4 4.9 1.6 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Arif-1 PF06770.11 NODE_60219_length_274_cov_46.029289_g52279_i0forward_frame_2 - 2.1 8.0 12.5 2.3 7.9 12.5 1.1 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) ATP-synt_E PF05680.12 NODE_60215_length_274_cov_52.092050_g52275_i0reverse_frame_3 - 0.02 15.2 0.2 0.03 14.6 0.1 1.3 1 1 0 1 1 1 0 ATP synthase E chain Ints3 PF10189.9 NODE_60213_length_274_cov_53.786611_g52273_i0forward_frame_3 - 0.021 14.1 0.4 0.025 13.9 0.4 1.0 1 0 0 1 1 1 0 Integrator complex subunit 3 Toxin_8 PF07365.12 NODE_60211_length_274_cov_57.707113_g52271_i0reverse_frame_3 - 0.053 13.7 2.2 0.088 13.0 2.2 1.5 1 0 0 1 1 1 0 Alpha conotoxin precursor SIS_2 PF13580.6 NODE_60208_length_274_cov_58.598326_g52268_i0reverse_frame_2 - 0.00053 20.0 0.1 0.00066 19.7 0.1 1.1 1 0 0 1 1 1 1 SIS domain PhnH PF05845.12 NODE_60208_length_274_cov_58.598326_g52268_i0reverse_frame_2 - 0.074 12.8 0.0 0.08 12.7 0.0 1.0 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnH) RRXRR PF14239.6 NODE_60208_length_274_cov_58.598326_g52268_i0forward_frame_3 - 0.084 12.7 3.8 0.095 12.6 3.8 1.1 1 0 0 1 1 1 0 RRXRR protein PGG PF13962.6 NODE_60206_length_274_cov_63.071130_g52266_i0reverse_frame_2 - 0.12 12.2 0.2 0.14 12.0 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF1180 PF06679.12 NODE_60205_length_274_cov_63.263598_g52265_i0forward_frame_2 - 0.22 11.9 4.0 0.26 11.7 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Myticin-prepro PF10690.9 NODE_60200_length_274_cov_78.238494_g52260_i0reverse_frame_2 - 0.087 13.1 0.2 0.087 13.1 0.2 1.3 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel DUF1729 PF08354.10 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.0064 15.4 0.7 0.0068 15.3 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1729) CRA PF06589.11 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.016 15.3 2.2 0.018 15.1 2.2 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) DUF3338 PF11819.8 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.041 13.8 3.3 0.052 13.5 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3338) TolA_bind_tri PF16331.5 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.069 13.2 4.1 0.14 12.3 0.6 2.0 1 1 1 2 2 2 0 TolA binding protein trimerisation TMPIT PF07851.13 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.096 11.9 3.7 0.1 11.8 3.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein OmpH PF03938.14 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.1 12.9 7.5 0.12 12.8 7.5 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Latarcin PF10279.9 NODE_60198_length_274_cov_79.485356_g52258_i0reverse_frame_3 - 0.00015 22.1 0.4 0.00023 21.5 0.4 1.3 1 0 0 1 1 1 1 Latarcin precursor Gmx_para_CXXCG PF09535.10 NODE_60197_length_274_cov_80.523013_g52257_i0forward_frame_3 - 0.046 13.0 0.1 0.052 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) CNPase PF05881.12 NODE_60196_length_274_cov_86.384937_g52256_i0reverse_frame_3 - 0.07 12.7 0.0 0.073 12.6 0.0 1.0 1 0 0 1 1 1 0 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) PTP_N PF12453.8 NODE_60188_length_274_cov_114.715481_g52248_i0forward_frame_2 - 0.17 11.6 0.2 0.36 10.6 0.2 1.5 1 0 0 1 1 1 0 Protein tyrosine phosphatase N terminal OTT_1508_deam PF14441.6 NODE_60180_length_274_cov_167.732218_g52240_i0reverse_frame_2 - 0.078 13.0 0.4 0.11 12.5 0.4 1.2 1 0 0 1 1 1 0 OTT_1508-like deaminase Oberon_cc PF16312.5 NODE_60178_length_274_cov_183.292887_g52238_i0forward_frame_2 - 0.06 13.3 0.3 0.073 13.0 0.3 1.1 1 0 0 1 1 1 0 Coiled-coil region of Oberon LEP503 PF15221.6 NODE_60177_length_274_cov_187.259414_g52237_i0reverse_frame_2 - 0.053 13.9 0.3 0.074 13.4 0.3 1.3 1 0 0 1 1 1 0 Lens epithelial cell protein LEP503 Gemini_coat PF00844.18 NODE_60174_length_274_cov_261.832636_g52234_i0reverse_frame_2 - 0.1 12.1 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 Geminivirus coat protein/nuclear export factor BR1 family ETRAMP PF09716.10 NODE_60172_length_274_cov_300.117155_g52232_i0forward_frame_2 - 0.047 13.8 0.0 0.059 13.4 0.0 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) FCH PF00611.23 NODE_60168_length_274_cov_662.556485_g52228_i0forward_frame_3 - 0.29 11.4 7.9 3.4 8.0 1.5 2.3 1 1 1 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain DUF2012 PF09430.10 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_3 - 7.5e-05 22.8 0.0 8.8e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2012) Y_Y_Y PF07495.13 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_3 - 0.01 15.8 0.1 0.017 15.1 0.1 1.3 1 0 0 1 1 1 0 Y_Y_Y domain CarboxypepD_reg PF13620.6 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_3 - 0.054 13.8 0.0 0.076 13.3 0.0 1.3 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain SdrD_B PF17210.3 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_3 - 0.13 12.5 0.1 0.16 12.2 0.1 1.2 1 0 0 1 1 1 0 SdrD B-like domain Lamprin PF06403.11 NODE_60160_length_275_cov_1.083333_g52220_i0forward_frame_2 - 0.048 13.6 0.4 0.055 13.4 0.4 1.1 1 0 0 1 1 1 0 Lamprin Oxysterol_BP PF01237.18 NODE_60155_length_275_cov_1.300000_g52215_i0reverse_frame_2 - 4.4e-10 38.9 0.1 4.8e-10 38.8 0.1 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein zf-C5HC2 PF02928.16 NODE_60151_length_275_cov_1.325000_g52211_i0reverse_frame_3 - 0.029 14.7 0.3 0.047 14.1 0.3 1.3 1 0 0 1 1 1 0 C5HC2 zinc finger DUF4439 PF14530.6 NODE_60151_length_275_cov_1.325000_g52211_i0forward_frame_3 - 0.16 12.6 0.0 0.2 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4439) Nic96 PF04097.14 NODE_60150_length_275_cov_1.333333_g52210_i0reverse_frame_3 - 0.024 13.1 0.0 0.024 13.1 0.0 1.2 1 0 0 1 1 1 0 Nup93/Nic96 Vps26 PF03643.15 NODE_60150_length_275_cov_1.333333_g52210_i0forward_frame_2 - 0.14 11.1 0.0 0.15 11.1 0.0 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 26 DUF5068 PF16781.5 NODE_60147_length_275_cov_1.341667_g52207_i0forward_frame_2 - 0.073 12.8 0.5 0.083 12.7 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5068) OTT_1508_deam PF14441.6 NODE_60147_length_275_cov_1.341667_g52207_i0forward_frame_2 - 0.084 12.9 0.2 0.099 12.7 0.2 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase Somatomedin_B PF01033.17 NODE_60146_length_275_cov_1.420833_g52206_i0forward_frame_3 - 1.9e-06 28.2 16.3 2.6e-06 27.7 16.3 1.2 1 0 0 1 1 1 1 Somatomedin B domain DUF5361 PF17318.2 NODE_60145_length_275_cov_1.450000_g52205_i0forward_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5361) DGOK PF05035.12 NODE_60140_length_275_cov_1.550000_g52200_i0forward_frame_2 - 0.095 11.6 0.0 0.095 11.6 0.0 1.1 1 0 0 1 1 1 0 2-keto-3-deoxy-galactonokinase DUF4203 PF13886.6 NODE_60130_length_275_cov_1.758333_g52190_i0reverse_frame_3 - 1.9e-09 37.5 20.6 2.1e-09 37.3 20.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) CPBP PF02517.16 NODE_60130_length_275_cov_1.758333_g52190_i0reverse_frame_3 - 4.1 7.8 8.8 4.7 7.6 8.8 1.1 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease DUF543 PF04418.12 NODE_60130_length_275_cov_1.758333_g52190_i0reverse_frame_3 - 8.1 6.5 7.2 0.67 10.0 1.0 2.2 1 1 2 3 3 3 0 Domain of unknown function (DUF543) AID PF18767.1 NODE_60130_length_275_cov_1.758333_g52190_i0forward_frame_2 - 0.11 12.5 0.4 0.16 12.0 0.4 1.2 1 0 0 1 1 1 0 Activation induced deaminase NIF PF03031.18 NODE_60126_length_275_cov_1.808333_g52186_i0reverse_frame_2 - 3.9e-25 88.4 0.0 4.4e-25 88.3 0.0 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase HAD PF12710.7 NODE_60126_length_275_cov_1.808333_g52186_i0reverse_frame_2 - 0.0073 16.7 0.0 0.0082 16.6 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase SVM_signal PF12113.8 NODE_60116_length_275_cov_2.095833_g52176_i0reverse_frame_2 - 7 6.7 8.8 0.72 9.8 0.8 2.9 3 0 0 3 3 3 0 SVM protein signal sequence # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks262.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks262.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks262.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks262.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RINGv PF12906.7 NODE_60109_length_275_cov_2.450000_g52169_i0forward_frame_2 - 1.5e-08 34.6 0.2 2.5e-08 33.9 0.2 1.4 1 0 0 1 1 1 1 RING-variant domain Cu2_monooxygen PF01082.20 NODE_60109_length_275_cov_2.450000_g52169_i0forward_frame_2 - 0.068 13.4 0.2 0.073 13.3 0.2 1.1 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain TMEM208_SND2 PF05620.11 NODE_60106_length_275_cov_2.470833_g52166_i0reverse_frame_2 - 0.048 13.4 0.2 0.061 13.1 0.2 1.0 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 CoA_binding_3 PF13727.6 NODE_60106_length_275_cov_2.470833_g52166_i0forward_frame_2 - 0.041 13.9 0.1 0.043 13.8 0.1 1.1 1 0 0 1 1 1 0 CoA-binding domain CcmD PF04995.14 NODE_60106_length_275_cov_2.470833_g52166_i0forward_frame_2 - 0.082 13.0 1.3 0.17 12.0 1.3 1.4 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) SIT PF15330.6 NODE_60106_length_275_cov_2.470833_g52166_i0forward_frame_2 - 0.13 12.7 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT YajC PF02699.15 NODE_60106_length_275_cov_2.470833_g52166_i0forward_frame_2 - 0.18 11.7 0.5 0.24 11.3 0.5 1.2 1 0 0 1 1 1 0 Preprotein translocase subunit CitMHS PF03600.16 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.0017 17.6 0.2 0.0018 17.5 0.2 1.0 1 0 0 1 1 1 1 Citrate transporter Pex24p PF06398.11 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.022 13.8 0.2 0.023 13.7 0.2 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin UPF0542 PF15086.6 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.022 14.7 0.1 0.031 14.2 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 TMEM208_SND2 PF05620.11 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.055 13.2 0.1 0.065 13.0 0.1 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 DUF2207 PF09972.9 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.16 10.7 1.1 0.17 10.6 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CAAD PF14159.6 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.16 11.8 3.3 0.12 12.3 2.0 1.5 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Baculo_11_kDa PF06143.11 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 1.1 8.8 12.0 4.8 6.8 8.2 2.5 1 1 0 1 1 1 0 Baculovirus 11 kDa family Catalase_C PF18011.1 NODE_60100_length_275_cov_2.766667_g52160_i0forward_frame_2 - 8.5e-09 35.2 0.0 9.9e-09 35.0 0.0 1.1 1 0 0 1 1 1 1 C-terminal domain found in long catalases RNA_pol_Rpb4 PF03874.16 NODE_60099_length_275_cov_2.812500_g52159_i0forward_frame_3 - 0.0019 18.5 0.0 0.0021 18.4 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb4 GCR PF02155.15 NODE_60098_length_275_cov_2.812500_g52158_i0reverse_frame_2 - 0.062 12.3 0.0 0.066 12.2 0.0 1.0 1 0 0 1 1 1 0 Glucocorticoid receptor WD40 PF00400.32 NODE_60092_length_275_cov_3.045833_g52152_i0forward_frame_3 - 0.0045 17.8 0.6 0.0083 17.0 0.6 1.5 1 1 0 1 1 1 1 WD domain, G-beta repeat CDC45 PF02724.14 NODE_60092_length_275_cov_3.045833_g52152_i0forward_frame_3 - 0.11 10.8 2.8 0.089 11.1 2.8 1.0 1 0 0 1 1 1 0 CDC45-like protein HATPase_c PF02518.26 NODE_60091_length_275_cov_3.091667_g52151_i0forward_frame_2 - 2.4e-08 34.5 0.0 2.7e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 NODE_60091_length_275_cov_3.091667_g52151_i0forward_frame_2 - 9.4e-07 28.7 0.0 1.1e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 NODE_60091_length_275_cov_3.091667_g52151_i0forward_frame_2 - 0.041 13.9 0.0 0.046 13.7 0.0 1.1 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 NODE_60091_length_275_cov_3.091667_g52151_i0forward_frame_2 - 0.065 13.1 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Glyco_transf_7N PF13733.6 NODE_60089_length_275_cov_3.250000_g52149_i0reverse_frame_3 - 0.12 12.0 0.7 0.17 11.5 0.7 1.2 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 ABC_tran_2 PF16949.5 NODE_60086_length_275_cov_5.479167_g52146_i0reverse_frame_3 - 0.035 12.9 5.1 0.037 12.9 5.1 1.0 1 0 0 1 1 1 0 Putative ATP-binding cassette ACOX PF01756.19 NODE_60082_length_275_cov_21.654167_g52142_i0forward_frame_2 - 8.7e-09 35.2 0.0 9.9e-09 35.0 0.0 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase DUF5609 PF18429.1 NODE_60080_length_275_cov_25.841667_g52140_i0forward_frame_2 - 0.0096 15.7 0.9 0.014 15.1 0.2 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF5609) Rhamno_transf PF11316.8 NODE_60079_length_275_cov_33.666667_g52139_i0forward_frame_3 - 0.026 13.9 0.1 0.03 13.7 0.1 1.1 1 0 0 1 1 1 0 Putative rhamnosyl transferase Serendipity_A PF05482.12 NODE_60078_length_275_cov_37.441667_g52138_i0forward_frame_3 - 0.0091 14.7 0.1 0.011 14.5 0.1 1.0 1 0 0 1 1 1 1 Serendipity locus alpha protein (SRY-A) DUF3916 PF13079.6 NODE_60074_length_275_cov_44.570833_g52134_i0reverse_frame_2 - 0.067 13.1 0.3 0.082 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) HXXEE PF13787.6 NODE_60074_length_275_cov_44.570833_g52134_i0forward_frame_3 - 0.042 14.7 2.1 0.047 14.5 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif DUF4750 PF15938.5 NODE_60074_length_275_cov_44.570833_g52134_i0forward_frame_3 - 0.076 12.7 8.8 0.12 12.0 8.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4750) Presenilin PF01080.17 NODE_60074_length_275_cov_44.570833_g52134_i0forward_frame_3 - 0.1 11.3 6.3 0.12 11.1 6.3 1.0 1 0 0 1 1 1 0 Presenilin DUF4116 PF13475.6 NODE_60068_length_275_cov_50.308333_g52128_i0reverse_frame_3 - 1.1e-11 44.3 0.0 2.1e-07 30.5 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4116) DUF483 PF04467.12 NODE_60066_length_275_cov_52.662500_g52126_i0reverse_frame_3 - 0.036 14.1 0.0 0.048 13.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF483) Sfi1_C PF10638.9 NODE_60064_length_275_cov_61.350000_g52124_i0reverse_frame_2 - 0.062 14.1 0.1 0.11 13.3 0.1 1.4 1 1 0 1 1 1 0 Spindle body associated protein C-terminus DUF3871 PF12987.7 NODE_60060_length_275_cov_66.770833_g52120_i0reverse_frame_3 - 0.012 14.5 2.4 0.013 14.4 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3871) PRIMA1 PF16101.5 NODE_60057_length_275_cov_70.466667_g52117_i0reverse_frame_2 - 0.059 13.4 0.1 0.079 13.0 0.1 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 RTP1_C2 PF10304.9 NODE_60054_length_275_cov_72.954167_g52114_i0reverse_frame_3 - 0.061 13.0 0.0 0.089 12.5 0.0 1.3 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 2 Rab_eff_C PF04698.12 NODE_60048_length_275_cov_113.329167_g52108_i0forward_frame_2 - 0.014 13.7 1.3 0.016 13.5 1.3 1.0 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus DUF3846 PF12957.7 NODE_60040_length_275_cov_553.475000_g52100_i0reverse_frame_2 - 0.12 12.8 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3846) TadE PF07811.12 NODE_60040_length_275_cov_553.475000_g52100_i0forward_frame_3 - 0.017 15.4 0.1 0.026 14.8 0.1 1.2 1 0 0 1 1 1 0 TadE-like protein SPC22 PF04573.12 NODE_60040_length_275_cov_553.475000_g52100_i0forward_frame_3 - 0.04 13.4 0.2 0.046 13.2 0.2 1.0 1 0 0 1 1 1 0 Signal peptidase subunit ETRAMP PF09716.10 NODE_60040_length_275_cov_553.475000_g52100_i0forward_frame_3 - 0.072 13.2 0.2 0.073 13.1 0.2 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF2633 PF11119.8 NODE_60040_length_275_cov_553.475000_g52100_i0forward_frame_2 - 0.0021 17.9 0.6 0.0032 17.3 0.6 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2633) DUF4548 PF15081.6 NODE_60034_length_276_cov_1.066390_g52094_i0forward_frame_3 - 0.023 14.6 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4548) LEAP-2 PF07359.11 NODE_60031_length_276_cov_1.157676_g52091_i0forward_frame_2 - 0.14 12.0 0.7 0.24 11.3 0.2 1.8 2 0 0 2 2 2 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Spectrin_like PF18373.1 NODE_60030_length_276_cov_1.199170_g52090_i0forward_frame_2 - 0.11 12.5 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Spectrin like domain Nuc_sug_transp PF04142.15 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 2.1e-08 33.7 0.1 2.5e-08 33.4 0.1 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter CRT-like PF08627.10 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 0.00019 20.5 1.0 0.00023 20.3 1.0 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like EamA PF00892.20 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 0.0009 19.4 4.2 0.001 19.2 4.2 1.1 1 0 0 1 1 1 1 EamA-like transporter family TPT PF03151.16 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 0.0045 16.4 0.6 0.0052 16.2 0.6 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family SdpI PF13630.6 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 0.45 10.7 0.1 0.45 10.7 0.1 2.3 2 1 0 2 2 2 0 SdpI/YhfL protein family TrbC PF04956.13 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 1 9.6 7.2 1.5 9.1 7.2 1.5 1 1 0 1 1 1 0 TrbC/VIRB2 family WW PF00397.26 NODE_60028_length_276_cov_1.248963_g52088_i0reverse_frame_2 - 1.2e-05 25.3 2.3 1.2e-05 25.3 2.3 1.9 2 0 0 2 2 2 1 WW domain Glyco_hyd_101C PF17451.2 NODE_60028_length_276_cov_1.248963_g52088_i0reverse_frame_2 - 0.0024 18.1 0.2 0.004 17.4 0.1 1.5 1 1 0 1 1 1 1 Glycosyl hydrolase 101 beta sandwich domain Ntox37 PF15535.6 NODE_60028_length_276_cov_1.248963_g52088_i0reverse_frame_2 - 0.025 15.0 0.6 1 9.8 0.0 2.2 1 1 1 2 2 2 0 Bacterial toxin 37 ASH PF15780.5 NODE_60024_length_276_cov_1.290456_g52084_i0forward_frame_3 - 0.12 12.6 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Resistin PF06954.11 NODE_60023_length_276_cov_1.294606_g52083_i0forward_frame_3 - 0.11 13.0 0.2 0.12 12.9 0.2 1.1 1 0 0 1 1 1 0 Resistin Flu_B_NS1 PF02942.14 NODE_60022_length_276_cov_1.315353_g52082_i0reverse_frame_3 - 0.11 11.6 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Influenza B non-structural protein (NS1) Ecm33 PF12454.8 NODE_60021_length_276_cov_1.323651_g52081_i0forward_frame_3 - 0.16 12.2 0.2 0.29 11.3 0.2 1.5 1 0 0 1 1 1 0 GPI-anchored cell wall organization protein HAP1_N PF04849.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 7.8e-05 22.0 8.4 9e-05 21.8 8.4 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region DUF3450 PF11932.8 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.00023 20.5 6.0 0.00024 20.5 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) YabA PF06156.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.0029 18.2 6.6 0.0037 17.9 6.6 1.2 1 0 0 1 1 1 1 Initiation control protein YabA Tup_N PF08581.10 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.0056 16.9 1.0 0.0056 16.9 1.0 2.6 1 1 1 2 2 2 1 Tup N-terminal DUF4618 PF15397.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.01 15.2 8.0 0.014 14.8 8.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) DUF3958 PF13125.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.013 15.7 5.7 0.013 15.7 5.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3958) BRE1 PF08647.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.015 15.4 3.4 0.015 15.4 3.4 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase Use1 PF09753.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.017 14.8 6.8 0.02 14.6 6.8 1.0 1 0 0 1 1 1 0 Membrane fusion protein Use1 bZIP_1 PF00170.21 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.018 15.1 12.6 0.034 14.2 6.4 2.3 1 1 1 2 2 2 0 bZIP transcription factor TMF_TATA_bd PF12325.8 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.019 15.2 9.5 0.03 14.5 4.1 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Rootletin PF15035.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.02 14.9 6.3 0.025 14.6 6.3 1.2 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion XH PF03469.14 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.034 14.1 2.4 0.039 13.9 2.4 1.2 1 0 0 1 1 1 0 XH domain DUF1615 PF07759.12 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.034 13.3 1.4 0.052 12.8 1.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1615) DUF148 PF02520.17 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.048 13.8 7.6 0.056 13.6 7.6 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF148 Baculo_helicase PF04735.12 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.055 11.0 3.1 0.055 11.0 3.1 1.0 1 0 0 1 1 1 0 Baculovirus DNA helicase DUF4407 PF14362.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.062 12.6 3.1 0.073 12.4 3.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CPSase_L_D3 PF02787.19 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.066 13.6 2.7 0.079 13.3 2.7 1.1 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APG6_N PF17675.1 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.066 13.7 11.4 0.087 13.4 11.4 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF2884 PF11101.8 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.069 12.7 4.9 0.087 12.3 4.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) CEP63 PF17045.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.078 12.9 10.2 0.87 9.4 10.1 1.9 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa GlcNAc-1_reg PF18440.1 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.1 12.8 0.8 0.2 11.9 0.8 1.7 1 1 0 1 1 1 0 Putative GlcNAc-1 phosphotransferase regulatory domain Macoilin PF09726.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.1 11.1 7.1 0.12 10.9 7.1 1.1 1 0 0 1 1 1 0 Macoilin family Sds3 PF08598.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.12 12.4 8.9 0.16 12.0 8.9 1.2 1 0 0 1 1 1 0 Sds3-like Helo_like_N PF17111.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.12 11.7 6.6 0.15 11.4 6.6 1.1 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins DUF1843 PF08898.10 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.13 12.8 3.3 4 8.0 0.6 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1843) Laminin_II PF06009.12 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.13 12.3 7.8 0.17 11.9 7.8 1.2 1 0 0 1 1 1 0 Laminin Domain II Exonuc_VII_L PF02601.15 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.13 11.8 4.9 0.15 11.6 4.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit HIP1_clath_bdg PF16515.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.19 12.3 9.7 0.31 11.7 9.7 1.3 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Retrotrans_gag PF03732.17 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.26 11.6 3.2 1 9.7 2.9 1.9 1 1 0 1 1 1 0 Retrotransposon gag protein GBP_C PF02841.14 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.27 10.6 9.5 0.29 10.5 9.5 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain Jnk-SapK_ap_N PF09744.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.31 11.2 11.5 0.71 10.1 11.5 1.6 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Spc7 PF08317.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.32 9.8 10.6 0.37 9.6 10.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4795 PF16043.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.46 10.1 10.3 0.28 10.8 7.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) JAKMIP_CC3 PF16034.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.54 10.2 11.8 1.1 9.2 11.8 1.5 1 1 0 1 1 1 0 JAKMIP CC3 domain UPF0242 PF06785.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.58 10.2 10.7 0.83 9.7 10.7 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4164 PF13747.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.58 10.5 11.4 1.2 9.5 8.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) Prefoldin_2 PF01920.20 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.58 10.1 14.0 0.15 12.0 6.3 2.1 1 1 1 2 2 2 0 Prefoldin subunit Ax_dynein_light PF10211.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.65 9.9 11.6 1.1 9.1 11.6 1.3 1 1 0 1 1 1 0 Axonemal dynein light chain Prominin PF05478.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.7 7.8 4.2 0.78 7.6 4.2 1.0 1 0 0 1 1 1 0 Prominin DUF4535 PF15054.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.7 9.7 2.0 14 5.5 0.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4535) PI3K_P85_iSH2 PF16454.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.72 9.4 13.7 0.27 10.8 5.8 1.9 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain M PF02370.16 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.75 10.6 6.7 9.7 7.1 0.1 3.3 3 0 0 3 3 3 0 M protein repeat SPATA24 PF15175.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.77 9.6 11.8 1.1 9.1 5.1 2.0 1 1 1 2 2 2 0 Spermatogenesis-associated protein 24 Cluap1 PF10234.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.86 8.9 12.4 3.4 7.0 12.4 1.8 1 1 0 1 1 1 0 Clusterin-associated protein-1 DUF1192 PF06698.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.99 9.5 9.5 7.5 6.7 0.9 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1192) Csm1_N PF18504.1 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 1.2 9.5 12.8 3.1 8.2 4.3 2.4 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF641 PF04859.12 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 1.2 9.5 9.5 6 7.2 9.5 1.8 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DivIC PF04977.15 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 1.3 8.9 12.8 2.1 8.2 5.9 2.4 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 1.7 7.8 5.4 2 7.5 5.4 1.2 1 0 0 1 1 1 0 TMPIT-like protein TMF_DNA_bd PF12329.8 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2 8.5 18.5 4.4 7.4 15.0 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding TSC22 PF01166.18 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2 8.8 9.0 1.5 9.2 4.2 2.5 1 1 1 2 2 2 0 TSC-22/dip/bun family Fzo_mitofusin PF04799.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2.1 7.9 6.8 4.7 6.7 6.8 1.6 1 1 0 1 1 1 0 fzo-like conserved region FapA PF03961.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2.4 6.7 11.0 2.9 6.4 11.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A bZIP_2 PF07716.15 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2.8 8.1 13.1 32 4.7 0.4 3.2 1 1 1 2 2 2 0 Basic region leucine zipper AAA_11 PF13086.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2.9 7.6 8.1 3.5 7.3 8.1 1.0 1 0 0 1 1 1 0 AAA domain zf-C4H2 PF10146.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 3.9 7.7 10.9 4.6 7.5 10.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4337 PF14235.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 4.5 7.4 7.0 12 6.0 7.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) Atg14 PF10186.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 4.6 6.2 9.7 5.3 6.0 9.7 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LMBR1 PF04791.16 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 5.2 5.9 4.8 5.6 5.7 4.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4140 PF13600.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 8.2 6.9 7.5 1.3e+02 3.1 7.5 2.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Ank_3 PF13606.6 NODE_60015_length_276_cov_1.464730_g52075_i0reverse_frame_3 - 0.003 17.9 0.1 2.4 9.0 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_2 PF12796.7 NODE_60015_length_276_cov_1.464730_g52075_i0reverse_frame_3 - 0.0066 17.0 0.0 0.0081 16.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_60015_length_276_cov_1.464730_g52075_i0reverse_frame_3 - 0.1 13.2 0.1 6.1 7.5 0.0 2.4 1 1 2 3 3 3 0 Ankyrin repeats (many copies) DUF2830 PF11125.8 NODE_60015_length_276_cov_1.464730_g52075_i0forward_frame_2 - 0.23 11.5 0.1 0.23 11.5 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2830) DUF4522 PF15022.6 NODE_60013_length_276_cov_1.502075_g52073_i0reverse_frame_2 - 0.06 13.6 0.0 0.075 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) WASH-7_mid PF14744.6 NODE_60013_length_276_cov_1.502075_g52073_i0forward_frame_2 - 3.8e-17 62.4 0.2 4.1e-17 62.3 0.2 1.0 1 0 0 1 1 1 1 WASH complex subunit 7 DUF5473 PF17567.2 NODE_60011_length_276_cov_1.526971_g52071_i0reverse_frame_2 - 0.039 14.2 0.5 0.053 13.8 0.5 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5473) Pdase_C33_assoc PF14756.6 NODE_60010_length_276_cov_1.535270_g52070_i0forward_frame_2 - 0.0035 17.3 0.1 0.0041 17.1 0.1 1.2 1 0 0 1 1 1 1 Peptidase_C33-associated domain SFTA2 PF15210.6 NODE_60005_length_276_cov_1.634855_g52065_i0reverse_frame_2 - 0.17 11.9 0.6 15 5.6 0.0 2.4 2 0 0 2 2 2 0 Surfactant-associated protein 2 DUF1741 PF08427.10 NODE_60004_length_276_cov_1.643154_g52064_i0forward_frame_3 - 0.018 14.7 0.1 0.018 14.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1741) DUF4418 PF14387.6 NODE_60003_length_276_cov_1.651452_g52063_i0reverse_frame_3 - 0.016 15.4 3.2 0.11 12.7 3.2 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4418) FAM176 PF14851.6 NODE_59996_length_276_cov_1.755187_g52056_i0forward_frame_2 - 0.041 13.5 1.8 0.05 13.3 1.8 1.1 1 0 0 1 1 1 0 FAM176 family MNSV_P7B PF06692.11 NODE_59995_length_276_cov_1.755187_g52055_i0forward_frame_3 - 0.31 11.1 5.8 0.23 11.5 1.7 2.1 1 1 1 2 2 2 0 Melon necrotic spot virus P7B protein HNHc_6 PF16784.5 NODE_59995_length_276_cov_1.755187_g52055_i0forward_frame_2 - 0.076 12.6 0.3 0.08 12.5 0.3 1.1 1 0 0 1 1 1 0 Putative HNHc nuclease RMP PF14996.6 NODE_59989_length_276_cov_1.850622_g52049_i0reverse_frame_2 - 0.0029 17.9 0.1 0.003 17.8 0.1 1.1 1 0 0 1 1 1 1 Retinal Maintenance TAT_signal PF10518.9 NODE_59987_length_276_cov_1.896266_g52047_i0forward_frame_3 - 0.36 10.7 1.6 0.64 10.0 1.6 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Response_reg PF00072.24 NODE_59985_length_276_cov_1.946058_g52045_i0forward_frame_3 - 2.4e-09 37.3 0.0 3.2e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain DUF4520 PF15016.6 NODE_59983_length_276_cov_2.041494_g52043_i0reverse_frame_3 - 0.11 12.6 0.4 0.18 11.9 0.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4520) YfdX PF10938.8 NODE_59983_length_276_cov_2.041494_g52043_i0reverse_frame_2 - 4.5e-10 39.6 0.1 4.5e-10 39.6 0.1 1.8 2 0 0 2 2 2 1 YfdX protein TarH PF02203.15 NODE_59983_length_276_cov_2.041494_g52043_i0reverse_frame_2 - 0.0028 17.6 2.2 0.0034 17.3 2.2 1.1 1 0 0 1 1 1 1 Tar ligand binding domain homologue Alpha_E1_glycop PF01589.16 NODE_59983_length_276_cov_2.041494_g52043_i0forward_frame_3 - 0.64 8.6 3.0 0.72 8.4 3.0 1.1 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein Chi-conotoxin PF16981.5 NODE_59976_length_276_cov_2.203320_g52036_i0forward_frame_2 - 0.1 12.9 0.3 0.21 11.9 0.0 1.7 2 0 0 2 2 2 0 chi-Conotoxin or t superfamily Sarcoglycan_1 PF04790.13 NODE_59975_length_276_cov_2.232365_g52035_i0forward_frame_3 - 0.16 11.3 0.4 0.15 11.4 0.4 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein Glycos_transf_1 PF00534.20 NODE_59974_length_276_cov_2.302905_g52034_i0forward_frame_3 - 6.2e-11 42.1 0.0 7.7e-11 41.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 NODE_59974_length_276_cov_2.302905_g52034_i0forward_frame_3 - 0.0007 20.0 0.0 0.001 19.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Pas_Saposin PF09016.10 NODE_59974_length_276_cov_2.302905_g52034_i0forward_frame_3 - 0.074 13.4 0.0 0.14 12.5 0.0 1.5 1 1 0 1 1 1 0 Pas factor saposin fold YcgR PF07317.12 NODE_59973_length_276_cov_2.373444_g52033_i0forward_frame_2 - 7.3e-13 48.3 0.0 9.3e-13 48.0 0.0 1.1 1 0 0 1 1 1 1 Flagellar regulator YcgR NEMO PF11577.8 NODE_59971_length_276_cov_2.385892_g52031_i0forward_frame_2 - 0.0084 16.1 1.3 0.011 15.7 1.3 1.1 1 0 0 1 1 1 1 NF-kappa-B essential modulator NEMO PknH_C PF14032.6 NODE_59970_length_276_cov_2.398340_g52030_i0reverse_frame_2 - 0.066 13.1 0.0 0.074 12.9 0.0 1.1 1 0 0 1 1 1 0 PknH-like extracellular domain pP_pnuc_2 PF18166.1 NODE_59964_length_276_cov_2.672199_g52024_i0reverse_frame_3 - 0.082 13.0 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease Colicin_im PF03857.13 NODE_59964_length_276_cov_2.672199_g52024_i0forward_frame_2 - 0.011 15.6 3.1 0.013 15.4 3.1 1.1 1 0 0 1 1 1 0 Colicin immunity protein SCAI PF12070.8 NODE_59963_length_276_cov_2.721992_g52023_i0reverse_frame_2 - 0.017 14.0 3.0 0.019 13.8 3.0 1.1 1 0 0 1 1 1 0 Protein SCAI HSBP1 PF06825.12 NODE_59954_length_276_cov_3.165975_g52014_i0forward_frame_2 - 0.36 10.7 0.4 0.36 10.7 0.4 1.8 2 0 0 2 2 2 0 Heat shock factor binding protein 1 Malate_synthase PF01274.22 NODE_59953_length_276_cov_3.186722_g52013_i0reverse_frame_2 - 1.2e-35 122.8 0.1 1.3e-35 122.7 0.1 1.0 1 0 0 1 1 1 1 Malate synthase EFG_II PF14492.6 NODE_59952_length_276_cov_3.286307_g52012_i0reverse_frame_2 - 0.0075 16.3 0.6 0.0096 16.0 0.6 1.2 1 0 0 1 1 1 1 Elongation Factor G, domain II DUF4460 PF14687.6 NODE_59952_length_276_cov_3.286307_g52012_i0reverse_frame_2 - 0.0084 16.2 3.0 0.0094 16.0 2.9 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4460) HOK_GEF PF01848.16 NODE_59951_length_276_cov_3.348548_g52011_i0forward_frame_2 - 1.2e-20 72.6 1.4 1.5e-20 72.3 1.4 1.1 1 0 0 1 1 1 1 Hok/gef family DUF3149 PF11346.8 NODE_59951_length_276_cov_3.348548_g52011_i0forward_frame_2 - 0.1 12.2 0.7 0.21 11.2 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) Rad60-SLD_2 PF13881.6 NODE_59950_length_276_cov_3.526971_g52010_i0forward_frame_3 - 0.083 13.0 0.0 0.095 12.8 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like DUF3656 PF12392.8 NODE_59950_length_276_cov_3.526971_g52010_i0forward_frame_2 - 1.7e-14 54.4 0.0 1.9e-14 54.2 0.0 1.0 1 0 0 1 1 1 1 Collagenase Phage_Gp23 PF10669.9 NODE_59947_length_276_cov_4.547718_g52007_i0forward_frame_3 - 0.021 15.2 0.3 0.032 14.6 0.3 1.2 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) KASH PF10541.9 NODE_59947_length_276_cov_4.547718_g52007_i0forward_frame_2 - 0.16 12.3 1.3 0.16 12.3 1.3 1.6 1 1 0 1 1 1 0 Nuclear envelope localisation domain Response_reg PF00072.24 NODE_59946_length_276_cov_6.253112_g52006_i0reverse_frame_2 - 1.8e-10 40.9 0.0 2.1e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain cNMP_binding PF00027.29 NODE_59943_length_276_cov_20.128631_g52003_i0reverse_frame_2 - 1.7e-10 40.8 0.0 2.6e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain O-antigen_lig PF13425.6 NODE_59942_length_276_cov_33.663900_g52002_i0forward_frame_3 - 0.068 11.9 1.4 0.076 11.8 1.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein SR-25 PF10500.9 NODE_59941_length_276_cov_47.489627_g52001_i0reverse_frame_2 - 5.6 6.5 6.8 5.1 6.6 6.8 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Hist_rich_Ca-bd PF10529.9 NODE_59934_length_276_cov_59.589212_g51994_i0forward_frame_2 - 0.3 11.3 2.8 0.51 10.6 2.8 1.4 1 0 0 1 1 1 0 Histidine-rich Calcium-binding repeat region DUF4995 PF16386.5 NODE_59928_length_276_cov_63.730290_g51988_i0reverse_frame_3 - 0.096 12.7 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function TORC_M PF12885.7 NODE_59925_length_276_cov_65.518672_g51985_i0forward_frame_2 - 0.02 14.8 0.5 0.027 14.4 0.5 1.2 1 0 0 1 1 1 0 Transducer of regulated CREB activity middle domain Plasmid_stab_B PF10784.9 NODE_59922_length_276_cov_67.900415_g51982_i0reverse_frame_3 - 0.16 11.9 0.1 0.24 11.3 0.1 1.3 1 0 0 1 1 1 0 Plasmid stability protein Pam17 PF08566.10 NODE_59919_length_276_cov_71.614108_g51979_i0forward_frame_3 - 0.059 13.2 0.0 0.065 13.1 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial import protein Pam17 TM231 PF10149.9 NODE_59912_length_276_cov_77.912863_g51972_i0reverse_frame_3 - 0.029 13.7 0.1 0.032 13.6 0.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 Sars6 PF12133.8 NODE_59912_length_276_cov_77.912863_g51972_i0forward_frame_2 - 0.043 13.7 0.5 0.071 13.0 0.5 1.3 1 0 0 1 1 1 0 Open reading frame 6 from SARS coronavirus GCH_III PF05165.12 NODE_59910_length_276_cov_79.307054_g51970_i0forward_frame_3 - 0.032 13.5 0.1 0.035 13.4 0.1 1.0 1 0 0 1 1 1 0 GTP cyclohydrolase III LRR_5 PF13306.6 NODE_59909_length_276_cov_80.867220_g51969_i0forward_frame_3 - 0.0044 17.0 0.2 0.0045 16.9 0.2 1.3 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) DUF4152 PF13680.6 NODE_59909_length_276_cov_80.867220_g51969_i0forward_frame_3 - 0.029 13.8 0.0 0.03 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4152) ETRAMP PF09716.10 NODE_59908_length_276_cov_81.443983_g51968_i0forward_frame_3 - 0.24 11.5 1.0 0.32 11.1 0.6 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Calici_MSP PF05752.11 NODE_59908_length_276_cov_81.443983_g51968_i0forward_frame_2 - 0.1 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Calicivirus minor structural protein RasGAP_C PF03836.15 NODE_59904_length_276_cov_97.020747_g51964_i0reverse_frame_2 - 0.0086 16.2 4.2 0.0097 16.1 4.2 1.0 1 0 0 1 1 1 1 RasGAP C-terminus HHV6-IE PF03753.13 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_3 - 0.18 9.2 9.3 0.2 9.1 9.3 1.0 1 0 0 1 1 1 0 Human herpesvirus 6 immediate early protein TFB6 PF17110.5 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_3 - 0.86 9.3 7.3 0.94 9.2 7.3 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DNA_pol_phi PF04931.13 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 1 7.4 13.7 1 7.4 13.7 1.0 1 0 0 1 1 1 0 DNA polymerase phi DUF4637 PF15470.6 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 1.5 8.5 9.5 1.8 8.3 9.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) PTPRCAP PF15713.5 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 2 8.7 11.7 2.3 8.5 11.7 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated CENP-B_dimeris PF09026.10 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 5 7.6 19.6 6.6 7.2 19.6 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain Sporozoite_P67 PF05642.11 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 7.5 4.5 7.4 7.1 4.6 7.4 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen EURL PF06937.11 NODE_59900_length_276_cov_125.842324_g51960_i0forward_frame_3 - 0.23 10.8 0.0 0.27 10.6 0.0 1.0 1 0 0 1 1 1 0 EURL protein TMEM43 PF07787.12 NODE_59899_length_276_cov_127.742739_g51959_i0reverse_frame_3 - 0.23 10.8 0.4 0.28 10.6 0.4 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 DUF1624 PF07786.12 NODE_59894_length_276_cov_160.132780_g51954_i0reverse_frame_3 - 0.0091 15.6 3.7 0.011 15.4 3.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) DUF4714 PF15833.5 NODE_59894_length_276_cov_160.132780_g51954_i0reverse_frame_2 - 0.09 12.7 0.5 0.078 13.0 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) SRA1 PF07304.11 NODE_59894_length_276_cov_160.132780_g51954_i0forward_frame_3 - 0.012 15.4 0.3 0.014 15.2 0.3 1.1 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) Ribosomal_60s PF00428.19 NODE_59890_length_276_cov_198.410788_g51950_i0forward_frame_2 - 0.19 12.4 3.8 0.3 11.7 3.3 1.5 2 0 0 2 2 2 0 60s Acidic ribosomal protein RPAP2_Rtr1 PF04181.13 NODE_59884_length_276_cov_1215.871369_g51944_i0forward_frame_3 - 0.052 13.9 0.6 0.07 13.5 0.6 1.2 1 0 0 1 1 1 0 Rtr1/RPAP2 family DUF2845 PF11006.8 NODE_59884_length_276_cov_1215.871369_g51944_i0forward_frame_3 - 0.13 12.4 0.2 0.17 12.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2845) DUF5438 PF17506.2 ORF99720 - 0.28 11.5 3.7 0.33 11.3 3.0 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5438) Ntox8 PF15545.6 ORF99397 - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 8 DUF2478 PF10649.9 ORF98816 - 0.016 14.9 0.2 0.016 14.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2478) Neurochondrin PF05536.11 ORF97762 - 0.068 11.5 0.0 0.091 11.1 0.0 1.1 1 0 0 1 1 1 0 Neurochondrin Dynactin_p62 PF05502.13 ORF97704 - 0.041 12.7 0.2 0.041 12.7 0.2 1.0 1 0 0 1 1 1 0 Dynactin p62 family Vsr PF03852.15 ORF96821 - 0.12 12.2 1.2 0.18 11.7 1.2 1.4 1 1 0 1 1 1 0 DNA mismatch endonuclease Vsr Macro_2 PF14519.6 ORF96322 - 0.025 13.9 0.0 0.028 13.8 0.0 1.1 1 0 0 1 1 1 0 Macro-like domain DUF4942 PF13708.6 ORF96322 - 0.085 12.8 0.2 0.097 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4942) BPD_transp_1 PF00528.22 ORF96255 - 5.7e-18 65.3 3.9 6.2e-18 65.2 3.9 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component N_BRCA1_IG PF16158.5 ORF9544 - 0.11 13.3 0.1 0.14 12.9 0.1 1.2 1 1 0 1 1 1 0 Ig-like domain from next to BRCA1 gene DUF3112 PF11309.8 ORF94408 - 0.036 13.5 0.6 0.042 13.3 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) Insulin_TMD PF17870.1 ORF94408 - 0.5 10.5 6.0 0.89 9.7 2.3 2.1 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Pex24p PF06398.11 ORF94408 - 0.59 9.1 2.9 0.6 9.0 2.9 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin AcrZ PF10766.9 ORF94408 - 2.9 7.5 7.6 0.18 11.4 2.5 1.6 2 0 0 2 2 2 0 Multidrug efflux pump-associated protein AcrZ Diphthamide_syn PF01866.17 ORF94366 - 9.5e-15 54.8 0.0 1.1e-14 54.6 0.0 1.1 1 0 0 1 1 1 1 Putative diphthamide synthesis protein DUF3781 PF12636.7 ORF94190 - 0.017 15.0 1.1 0.028 14.3 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) DUF503 PF04456.12 ORF93925 - 0.14 12.0 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF503) Mac PF12464.8 ORF93871 - 0.0093 16.2 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 1 Maltose acetyltransferase Armet PF10208.9 ORF93871 - 0.1 12.5 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding APOC4 PF15119.6 ORF93871 - 0.12 12.6 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Apolipoprotein C4 Nbl1_Borealin_N PF10444.9 ORF93701 - 0.06 13.0 0.0 0.098 12.3 0.0 1.3 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Colipase PF01114.18 ORF93599 - 0.01 15.5 0.6 0.025 14.2 0.6 1.7 1 0 0 1 1 1 0 Colipase, N-terminal domain DUF5389 PF17364.2 ORF93366 - 0.0067 16.5 7.5 0.43 10.7 1.8 2.0 1 1 1 2 2 2 2 Family of unknown function (DUF5389) Sep15_SelM PF08806.11 ORF93003 - 0.0037 17.4 0.0 0.0049 17.0 0.0 1.2 1 0 0 1 1 1 1 Sep15/SelM redox domain Mac PF12464.8 ORF93003 - 0.057 13.7 0.1 0.085 13.1 0.1 1.3 1 0 0 1 1 1 0 Maltose acetyltransferase MIP PF00230.20 ORF92810 - 9.9e-05 22.1 0.0 0.0001 22.1 0.0 1.0 1 0 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF92810 - 0.015 14.7 0.2 0.029 13.8 0.2 1.5 1 0 0 1 1 1 0 Transmembrane alpha-helix domain DUF3989 PF13150.6 ORF92247 - 0.23 11.2 3.8 0.31 10.8 3.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) Baculo_11_kDa PF06143.11 ORF92247 - 2.4 7.8 7.8 1.7 8.3 6.0 1.7 1 1 1 2 2 2 0 Baculovirus 11 kDa family Opi1 PF08618.10 ORF9128 - 0.072 12.3 4.3 0.078 12.2 4.3 1.0 1 0 0 1 1 1 0 Transcription factor Opi1 SRP72 PF08492.12 ORF9123 - 1.4e-11 44.7 10.3 1.4e-11 44.7 10.3 1.9 2 1 1 3 3 3 1 SRP72 RNA-binding domain Pox_G9-A16 PF03003.16 ORF90576 - 0.075 12.8 0.2 0.097 12.4 0.2 1.2 1 0 0 1 1 1 0 Pox virus entry-fusion-complex G9/A16 MOSC PF03473.17 ORF90491 - 4.7e-09 36.4 0.0 5.4e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 MOSC domain Haemagg_act PF05860.13 ORF89405 - 0.083 12.8 0.0 0.083 12.8 0.0 1.2 1 0 0 1 1 1 0 haemagglutination activity domain BES1_N PF05687.13 ORF89310 - 0.012 16.0 0.1 0.013 15.9 0.1 1.2 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal CX9C PF16860.5 ORF8851 - 2.9e-07 30.4 0.4 4.2e-07 29.9 0.4 1.2 1 0 0 1 1 1 1 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, FUSC PF04632.12 ORF88435 - 0.053 12.1 0.3 0.052 12.1 0.3 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Perilipin PF03036.16 ORF88286 - 0.11 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 Perilipin family CECR6_TMEM121 PF14997.6 ORF8799 - 0.017 15.0 2.7 0.018 14.8 2.7 1.1 1 0 0 1 1 1 0 CECR6/TMEM121 family DUF4441 PF14536.6 ORF87662 - 0.016 15.4 0.6 0.024 14.8 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) DUF2554 PF10829.8 ORF87511 - 0.16 12.4 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2554) Pkinase PF00069.25 ORF8707 - 0.05 13.0 0.0 0.057 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain ABC_ATPase PF09818.9 ORF86011 - 0.0084 14.9 0.0 0.0084 14.9 0.0 1.1 1 0 0 1 1 1 1 Predicted ATPase of the ABC class AAA_21 PF13304.6 ORF86011 - 0.066 13.0 0.0 0.078 12.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system MORN PF02493.20 ORF84517 - 3.1e-12 45.6 30.2 3.2e-05 23.6 2.8 4.1 4 0 0 4 4 4 3 MORN repeat Pkinase_C PF00433.24 ORF84479 - 0.00032 21.3 0.1 0.00047 20.8 0.1 1.3 1 0 0 1 1 1 1 Protein kinase C terminal domain RuvX PF03652.15 ORF84479 - 0.13 12.6 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 Holliday junction resolvase DUF4440 PF14534.6 ORF84449 - 0.00025 21.4 0.0 0.00026 21.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF84449 - 0.0045 17.6 0.0 0.0053 17.4 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 ORF84449 - 0.13 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like domain Kinesin PF00225.23 ORF84370 - 1.1e-12 47.5 0.4 1.1e-12 47.5 0.4 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF84370 - 0.0004 20.3 0.2 0.00044 20.2 0.2 1.1 1 0 0 1 1 1 1 Microtubule binding UQ_con PF00179.26 ORF84296 - 3e-21 75.6 0.1 3.3e-21 75.4 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DoxX PF07681.12 ORF84187 - 0.00085 19.9 0.5 0.0017 18.9 0.5 1.4 1 1 0 1 1 1 1 DoxX DoxX_2 PF13564.6 ORF84187 - 0.00092 19.3 0.2 0.0024 17.9 0.2 1.6 1 1 0 1 1 1 1 DoxX-like family HR_lesion PF05514.11 ORF84187 - 0.072 13.3 0.1 0.087 13.0 0.1 1.1 1 0 0 1 1 1 0 HR-like lesion-inducing Phospholamban PF04272.14 ORF84001 - 6.1 6.4 8.3 0.99 8.9 0.3 2.3 2 0 0 2 2 2 0 Phospholamban PanZ PF12568.8 ORF83664 - 0.0057 16.4 0.1 2.3 7.9 0.0 2.8 3 0 0 3 3 3 2 Acetyltransferase (GNAT) domain, PanZ Phe_hydrox_dim PF07976.12 ORF83664 - 0.17 11.9 0.5 21 5.1 0.0 2.8 1 1 2 3 3 3 0 Phenol hydroxylase, C-terminal dimerisation domain RL10P_insert PF17777.1 ORF83664 - 0.18 11.8 0.0 17 5.5 0.0 2.1 1 1 1 2 2 2 0 Insertion domain in 60S ribosomal protein L10P DUF702 PF05142.12 ORF834 - 0.051 14.0 0.1 0.058 13.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF702) NosL PF05573.12 ORF83200 - 0.028 14.8 0.1 0.038 14.3 0.1 1.3 1 1 0 1 1 1 0 NosL Aldo_ket_red PF00248.21 ORF82801 - 1.1e-10 41.3 0.0 1.1e-10 41.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Iron_traffic PF04362.14 ORF82405 - 2e-40 136.4 1.4 2.2e-40 136.2 1.4 1.0 1 0 0 1 1 1 1 Bacterial Fe(2+) trafficking DUF5412 PF17428.2 ORF82405 - 0.0084 16.0 0.2 0.012 15.5 0.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5412) Allexi_40kDa PF05549.11 ORF81467 - 0.049 13.1 0.1 0.053 13.0 0.1 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF4110 PF13422.6 ORF81467 - 0.19 11.8 5.6 0.23 11.6 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4110) RNA_pol_Rpb6 PF01192.22 ORF80989 - 1.2e-15 57.1 0.1 2e-15 56.4 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb6 Fibrinogen_BP PF08017.11 ORF80903 - 0.086 11.3 1.1 0.082 11.3 1.1 1.1 1 0 0 1 1 1 0 Fibrinogen binding protein HEAT PF02985.22 ORF80873 - 0.038 14.2 0.0 0.078 13.3 0.0 1.6 1 0 0 1 1 1 0 HEAT repeat RTP1_C1 PF10363.9 ORF80873 - 0.045 13.9 0.0 0.049 13.8 0.0 1.3 1 1 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 Aim19 PF10315.9 ORF80833 - 0.073 13.4 0.0 0.14 12.5 0.0 1.5 1 1 1 2 2 2 0 Altered inheritance of mitochondria protein 19 CxC3 PF18804.1 ORF80333 - 0.016 15.0 0.7 0.023 14.5 0.1 1.5 1 1 1 2 2 2 0 CxC3 like cysteine cluster associated with KDZ transposases MutS_V PF00488.21 ORF80228 - 5e-07 29.9 0.0 6.9e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 MutS domain V DUF768 PF05589.11 ORF80228 - 0.16 12.0 0.0 0.28 11.2 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF768) DUF5438 PF17506.2 ORF79235 - 0.28 11.5 3.7 0.33 11.3 3.0 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5438) PemK_toxin PF02452.17 ORF78639 - 5.8e-14 52.4 0.1 6.9e-14 52.2 0.1 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks263.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks263.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks263.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks263.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:06 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- BLOC1_2 PF10046.9 ORF78281 - 0.008 16.5 2.0 0.013 15.8 1.0 1.7 1 1 1 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 FlaC_arch PF05377.11 ORF78281 - 0.032 14.6 3.9 2.1 8.8 0.1 2.2 1 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Aldo_ket_red PF00248.21 ORF77103 - 0.041 13.1 0.0 0.042 13.0 0.0 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family RRM_2 PF04059.12 ORF76881 - 0.0011 19.1 0.0 0.0016 18.6 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif 2 ArgJ PF01960.18 ORF76665 - 0.13 11.0 0.0 0.13 11.0 0.0 1.1 1 0 0 1 1 1 0 ArgJ family DUF3644 PF12358.8 ORF74481 - 0.056 13.9 0.2 0.069 13.6 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3644) DUF4477 PF14780.6 ORF74304 - 0.012 15.2 0.2 0.013 15.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) Vip3A_N PF12495.8 ORF74304 - 0.029 14.3 1.7 0.034 14.0 1.7 1.0 1 0 0 1 1 1 0 Vegetative insecticide protein 3A N terminal DUF1687 PF07955.11 ORF74304 - 0.064 13.7 0.2 0.069 13.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1687) Glyco_hydro_49N PF17433.2 ORF74147 - 0.13 11.9 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 49 N-terminal Ig-like domain Rhomboid_N PF12122.8 ORF73239 - 0.022 14.9 0.3 0.026 14.7 0.3 1.1 1 0 0 1 1 1 0 Cytoplasmic N-terminal domain of rhomboid serine protease MAGE PF01454.19 ORF73239 - 0.038 13.7 0.2 0.043 13.5 0.2 1.2 1 1 0 1 1 1 0 MAGE family Mad3_BUB1_I PF08311.12 ORF73239 - 0.073 13.1 0.5 0.11 12.4 0.5 1.4 1 1 0 1 1 1 0 Mad3/BUB1 homology region 1 Pkinase PF00069.25 ORF73165 - 5.2e-22 78.5 0.0 5.6e-22 78.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73165 - 2.9e-11 43.2 0.0 3.4e-11 42.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF73165 - 0.0087 15.4 0.0 0.0087 15.4 0.0 1.0 1 0 0 1 1 1 1 Kinase-like bZIP_2 PF07716.15 ORF72938 - 1.3 9.2 12.4 1.1 9.5 4.0 2.3 1 1 1 2 2 2 0 Basic region leucine zipper DUF4798 PF16055.5 ORF72808 - 0.17 12.1 2.2 0.22 11.8 0.4 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4798) DUF3734 PF12536.8 ORF72334 - 0.013 15.9 0.8 0.018 15.4 0.8 1.3 1 0 0 1 1 1 0 Patatin phospholipase DUF883 PF05957.13 ORF72334 - 0.019 15.6 0.9 0.021 15.4 0.9 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) TAN PF11640.8 ORF72334 - 0.034 14.3 0.4 0.042 14.0 0.4 1.0 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair Ras PF00071.22 ORF72334 - 0.07 12.7 0.0 0.099 12.2 0.0 1.2 1 0 0 1 1 1 0 Ras family IBR PF01485.21 ORF72184 - 0.0008 19.6 8.2 0.0008 19.6 8.2 2.4 2 1 0 2 2 2 1 IBR domain, a half RING-finger domain zinc_ribbon_4 PF13717.6 ORF72184 - 0.028 14.3 13.3 0.79 9.7 0.1 3.5 4 0 0 4 4 4 0 zinc-ribbon domain zf-RING_5 PF14634.6 ORF72184 - 0.04 13.9 11.6 3.6 7.6 1.2 3.3 2 1 0 2 2 2 0 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF72184 - 1.2 9.1 12.6 6.5 6.7 2.3 3.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF72184 - 1.3 9.4 13.7 17 5.9 4.1 3.3 2 1 0 2 2 2 0 Ring finger domain zf-C2H2_6 PF13912.6 ORF72184 - 2.7 8.1 13.9 1.7 8.7 1.3 3.7 4 0 0 4 4 4 0 C2H2-type zinc finger zf-NADH-PPase PF09297.11 ORF72184 - 3.9 7.2 13.1 0.67 9.7 0.4 2.5 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Tnp_zf-ribbon_2 PF13842.6 ORF72184 - 6.9 7.6 13.5 1.5e+02 3.3 10.1 3.2 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon Zip PF02535.22 ORF71505 - 2.7 7.1 5.5 3 7.0 5.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter UPF0302 PF08864.10 ORF70823 - 0.067 13.3 0.0 0.073 13.1 0.0 1.1 1 0 0 1 1 1 0 UPF0302 domain DUF1281_C PF18406.1 ORF70823 - 0.14 11.8 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein IFNGR1 PF07140.11 ORF70620 - 0.036 14.2 0.2 0.039 14.0 0.2 1.1 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) Ribosomal_L22 PF00237.19 ORF69933 - 0.0039 17.4 0.2 0.052 13.8 0.1 2.0 1 1 1 2 2 2 2 Ribosomal protein L22p/L17e Hira PF07569.11 ORF69821 - 0.11 12.2 0.7 0.14 11.8 0.7 1.1 1 0 0 1 1 1 0 TUP1-like enhancer of split IHO1 PF15771.5 ORF69719 - 3.3 6.4 6.9 3.4 6.3 6.9 1.0 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 Molydop_binding PF01568.21 ORF69558 - 4.7e-25 87.8 0.0 5.3e-25 87.6 0.0 1.0 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Syntaxin-6_N PF09177.11 ORF69336 - 0.046 14.3 6.5 0.074 13.6 6.5 1.3 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Fib_alpha PF08702.10 ORF69336 - 0.29 11.3 8.6 0.36 11.0 8.6 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family MetOD2 PF18548.1 ORF69336 - 0.54 10.4 9.9 0.063 13.4 1.8 2.0 1 1 1 2 2 2 0 Metanogen output domain 2 FapA PF03961.13 ORF69336 - 0.69 8.4 12.5 0.72 8.4 12.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 ORF69336 - 1.3 8.0 9.9 1.4 7.9 9.9 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YtxH PF12732.7 ORF69336 - 4.5 7.9 6.9 21 5.7 6.9 1.9 1 1 0 1 1 1 0 YtxH-like protein CMV_1a PF12467.8 ORF68713 - 0.054 13.8 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein family DUF543 PF04418.12 ORF68086 - 0.21 11.6 1.0 0.35 10.9 1.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF543) Dynactin_p62 PF05502.13 ORF67171 - 0.041 12.7 0.2 0.041 12.7 0.2 1.0 1 0 0 1 1 1 0 Dynactin p62 family Aldo_ket_red PF00248.21 ORF66387 - 1.4e-15 57.3 0.0 1.6e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Rsm1 PF08600.10 ORF65835 - 0.056 13.6 2.8 0.099 12.8 2.8 1.5 1 1 0 1 1 1 0 Rsm1-like MaoC_dehydratas PF01575.19 ORF6557 - 3.6e-15 55.6 0.0 4.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 MaoC like domain DUF1471 PF07338.13 ORF64781 - 2.8e-19 68.8 0.2 4.1e-19 68.3 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) Trypan_PARP PF05887.11 ORF64781 - 0.12 12.3 0.2 0.18 11.8 0.1 1.3 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF745 PF05335.13 ORF64717 - 0.00095 18.9 1.4 0.0011 18.7 1.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF745) GAS PF13851.6 ORF64717 - 0.0011 18.4 6.4 0.0015 17.9 6.4 1.2 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding Csm1_N PF18504.1 ORF64717 - 0.0057 17.0 8.7 0.036 14.4 2.9 2.5 2 1 0 2 2 2 1 Csm1 N-terminal domain HrpB7 PF09486.10 ORF64717 - 0.0086 16.5 0.2 0.01 16.3 0.2 1.1 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) Phage_GP20 PF06810.11 ORF64717 - 0.012 15.4 11.1 0.012 15.4 11.1 1.0 1 0 0 1 1 1 0 Phage minor structural protein GP20 Fez1 PF06818.15 ORF64717 - 0.027 14.9 5.4 0.031 14.7 5.4 1.0 1 0 0 1 1 1 0 Fez1 Atg14 PF10186.9 ORF64717 - 0.056 12.5 6.3 0.063 12.4 6.3 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 BST2 PF16716.5 ORF64717 - 0.33 11.6 6.9 0.06 13.9 2.8 1.7 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 YabA PF06156.13 ORF64717 - 0.4 11.4 5.7 0.5 11.0 5.7 1.2 1 0 0 1 1 1 0 Initiation control protein YabA DivIC PF04977.15 ORF64717 - 1.3 8.9 6.3 0.81 9.5 2.3 2.0 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 ORF64717 - 2.1 7.5 4.8 2.2 7.4 4.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein SapB_1 PF05184.15 ORF64717 - 2.3 8.3 5.2 4.2 7.5 0.1 3.1 3 0 0 3 3 3 0 Saposin-like type B, region 1 DUF2554 PF10829.8 ORF64339 - 0.16 12.4 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2554) AAA_29 PF13555.6 ORF6356 - 0.084 12.6 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 ORF6356 - 0.16 12.5 0.0 0.2 12.2 0.0 1.1 1 0 0 1 1 1 0 ABC transporter CKAP2_C PF15297.6 ORF62736 - 3 6.8 7.9 3.6 6.6 7.9 1.0 1 0 0 1 1 1 0 Cytoskeleton-associated protein 2 C-terminus Pyridoxal_deC PF00282.19 ORF62487 - 2.4e-05 23.2 0.0 2.8e-05 23.0 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain DUF2951 PF11166.8 ORF62003 - 1.8 8.8 6.7 1.4 9.1 4.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) Cytochrome-c551 PF10643.9 ORF61090 - 0.77 9.3 3.4 0.79 9.3 3.4 1.1 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 OxoGdeHyase_C PF16870.5 ORF60949 - 3.2e-13 49.6 0.2 3.6e-13 49.5 0.2 1.0 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal PLDc_2 PF13091.6 ORF60949 - 0.063 13.2 0.2 0.071 13.0 0.2 1.1 1 0 0 1 1 1 0 PLD-like domain Miff PF05644.11 ORF60664 - 0.031 13.9 0.2 0.033 13.8 0.2 1.0 1 0 0 1 1 1 0 Mitochondrial and peroxisomal fission factor Mff MORN PF02493.20 ORF60161 - 3e-12 45.6 30.3 3.2e-05 23.6 2.8 4.1 4 0 0 4 4 4 3 MORN repeat Pox_G9-A16 PF03003.16 ORF5989 - 0.075 12.8 0.2 0.097 12.4 0.2 1.2 1 0 0 1 1 1 0 Pox virus entry-fusion-complex G9/A16 Insulin_TMD PF17870.1 ORF59711 - 0.34 11.0 5.5 0.18 11.9 0.7 2.2 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Secapin PF17521.2 ORF593 - 0.021 14.6 0.5 3.1 7.6 0.1 2.2 2 0 0 2 2 2 0 Honey bee peptides Barttin PF15462.6 ORF59066 - 0.022 14.5 0.2 0.023 14.5 0.2 1.1 1 0 0 1 1 1 0 Bartter syndrome, infantile, with sensorineural deafness (Barttin) BIRC6 PF12356.8 ORF58246 - 0.022 14.2 0.2 0.026 14.0 0.2 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 FAM176 PF14851.6 ORF58246 - 0.14 11.8 3.7 0.16 11.7 3.7 1.1 1 0 0 1 1 1 0 FAM176 family TRAP_alpha PF03896.16 ORF58246 - 0.26 10.5 4.0 0.27 10.4 4.0 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit CDC45 PF02724.14 ORF58246 - 1.6 6.9 6.4 1.6 6.9 6.4 1.1 1 0 0 1 1 1 0 CDC45-like protein NOA36 PF06524.12 ORF58246 - 2.9 7.1 8.9 3.3 6.9 8.9 1.2 1 0 0 1 1 1 0 NOA36 protein DNA_pol_phi PF04931.13 ORF58246 - 7.1 4.6 11.4 7.4 4.5 11.4 1.0 1 0 0 1 1 1 0 DNA polymerase phi Peptidase_A22B PF04258.13 ORF58180 - 0.0012 18.4 12.3 0.0013 18.3 12.3 1.0 1 0 0 1 1 1 1 Signal peptide peptidase DUF5426 PF17473.2 ORF58180 - 0.047 14.0 6.3 0.059 13.6 6.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5426) Microcin PF03526.13 ORF58180 - 0.47 10.3 5.0 5.3 6.9 0.9 2.2 2 0 0 2 2 2 0 Colicin E1 (microcin) immunity protein SRP72 PF08492.12 ORF57845 - 1.4e-11 44.7 10.3 1.4e-11 44.7 10.3 1.9 2 1 1 3 3 3 1 SRP72 RNA-binding domain DUF4810 PF16068.5 ORF57794 - 0.18 12.4 0.0 0.26 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4810) DUF1508 PF07411.12 ORF57470 - 0.1 12.5 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1508) CECR6_TMEM121 PF14997.6 ORF57413 - 0.017 15.0 2.7 0.018 14.8 2.7 1.1 1 0 0 1 1 1 0 CECR6/TMEM121 family Metallophos_C PF14008.6 ORF57321 - 0.003 18.4 0.1 0.004 18.0 0.1 1.2 1 0 0 1 1 1 1 Iron/zinc purple acid phosphatase-like protein C DUF4131 PF13567.6 ORF57145 - 0.031 13.9 0.0 0.041 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3669 PF12417.8 ORF56576 - 0.19 11.9 0.0 0.3 11.3 0.0 1.3 1 0 0 1 1 1 0 Zinc finger protein Methyltransf_24 PF13578.6 ORF56250 - 1.6e-05 25.9 0.4 2.3e-05 25.4 0.4 1.2 1 0 0 1 1 1 1 Methyltransferase domain NosL PF05573.12 ORF55969 - 0.028 14.8 0.1 0.038 14.3 0.1 1.3 1 1 0 1 1 1 0 NosL GP63 PF17471.2 ORF54943 - 0.052 13.7 0.1 0.084 13.0 0.1 1.4 1 0 0 1 1 1 0 Gene product 63 Qn_am_d_aIV PF09100.10 ORF54717 - 0.075 12.9 0.0 0.079 12.8 0.0 1.1 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV PH_8 PF15409.6 ORF54399 - 0.00071 19.8 0.0 0.00082 19.6 0.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain DpnI_C PF17726.1 ORF54249 - 0.093 12.9 0.5 0.17 12.0 0.5 1.5 1 1 0 1 1 1 0 Dam-replacing HTH domain DUF2838 PF10998.8 ORF53534 - 0.0047 17.1 0.2 0.0064 16.7 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) TetR_C_29 PF17938.1 ORF51532 - 0.083 13.0 0.9 0.13 12.4 0.7 1.3 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain GMC_oxred_C PF05199.13 ORF51133 - 4e-12 46.9 0.0 4.2e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase DUF3112 PF11309.8 ORF49269 - 0.036 13.5 0.6 0.042 13.3 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) Insulin_TMD PF17870.1 ORF49269 - 0.5 10.5 6.0 0.89 9.7 2.3 2.1 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Pex24p PF06398.11 ORF49269 - 0.59 9.1 2.9 0.6 9.0 2.9 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin AcrZ PF10766.9 ORF49269 - 2.9 7.5 7.6 0.18 11.4 2.5 1.6 2 0 0 2 2 2 0 Multidrug efflux pump-associated protein AcrZ TMF_DNA_bd PF12329.8 ORF48187 - 0.0088 16.0 0.7 0.0088 16.0 0.7 2.1 3 0 0 3 3 3 1 TATA element modulatory factor 1 DNA binding DUF5344 PF17279.2 ORF48187 - 0.027 15.0 1.6 0.035 14.7 0.6 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5344) Strep_SA_rep PF06696.11 ORF48187 - 0.051 13.6 5.4 0.2 11.7 0.6 2.3 2 0 0 2 2 2 0 Streptococcal surface antigen repeat DUF1844 PF08899.11 ORF48187 - 0.068 13.5 0.5 0.12 12.7 0.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF1844) AJAP1_PANP_C PF15298.6 ORF48187 - 0.074 13.3 0.0 0.093 12.9 0.0 1.3 1 1 0 1 1 1 0 AJAP1/PANP C-terminus Tropomyosin_1 PF12718.7 ORF48187 - 0.08 13.1 3.9 0.092 12.9 3.9 1.1 1 0 0 1 1 1 0 Tropomyosin like GIT_CC PF16559.5 ORF48187 - 0.12 12.2 2.5 0.33 10.9 0.6 2.0 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor bZIP_1 PF00170.21 ORF48187 - 0.22 11.7 4.7 0.94 9.6 0.3 2.2 2 0 0 2 2 2 0 bZIP transcription factor Mto2_bdg PF12808.7 ORF48187 - 0.25 11.7 2.6 1.4 9.3 0.3 2.2 2 0 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region RepA_C PF04796.12 ORF48120 - 0.054 13.5 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Plasmid encoded RepA protein RRM_DME PF15628.6 ORF48120 - 0.092 12.9 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 RRM in Demeter Exonuc_VIII PF06630.11 ORF4767 - 4.8e-58 196.2 0.5 5.3e-58 196.1 0.5 1.0 1 0 0 1 1 1 1 Enterobacterial exodeoxyribonuclease VIII RELT PF12606.8 ORF47482 - 0.025 13.6 0.1 0.043 12.8 0.1 1.3 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 GH101_N PF17995.1 ORF47348 - 0.036 13.7 0.1 0.038 13.6 0.1 1.1 1 0 0 1 1 1 0 Endo-alpha-N-acetylgalactosaminidase N-terminal CENP-O PF09496.10 ORF47011 - 0.029 14.3 2.0 0.029 14.3 2.0 1.0 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component YqzE PF14038.6 ORF47011 - 0.15 12.1 0.2 0.27 11.3 0.2 1.4 1 0 0 1 1 1 0 YqzE-like protein RepA_C PF04796.12 ORF46614 - 0.054 13.5 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Plasmid encoded RepA protein RRM_DME PF15628.6 ORF46614 - 0.092 12.9 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 RRM in Demeter Glucos_trans_II PF14264.6 ORF4528 - 0.0061 16.0 0.7 0.0074 15.7 0.7 1.0 1 0 0 1 1 1 1 Glucosyl transferase GtrII Ac76 PF05814.11 ORF4528 - 0.02 14.9 0.1 0.024 14.7 0.1 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) DUF3624 PF12292.8 ORF4528 - 0.091 13.2 0.1 0.11 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3624) DUF1772 PF08592.11 ORF4528 - 0.12 12.7 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) DUF3112 PF11309.8 ORF44930 - 0.036 13.5 0.6 0.042 13.3 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) Insulin_TMD PF17870.1 ORF44930 - 0.5 10.5 6.0 0.89 9.7 2.3 2.1 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Pex24p PF06398.11 ORF44930 - 0.59 9.1 2.9 0.6 9.0 2.9 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin AcrZ PF10766.9 ORF44930 - 2.9 7.5 7.6 0.18 11.4 2.5 1.6 2 0 0 2 2 2 0 Multidrug efflux pump-associated protein AcrZ TMEM190 PF15431.6 ORF44450 - 0.019 15.1 0.2 0.023 14.9 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 190 Pkinase PF00069.25 ORF44241 - 8.1e-16 58.2 0.0 9.1e-16 58.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44241 - 0.00098 18.5 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF44241 - 0.044 13.1 0.0 0.049 12.9 0.0 1.1 1 0 0 1 1 1 0 Kinase-like IL3 PF02059.15 ORF44139 - 0.034 14.2 0.4 0.13 12.3 0.4 1.8 1 1 0 1 1 1 0 Interleukin-3 RMI1_C PF16099.5 ORF44139 - 0.039 13.8 0.0 0.043 13.6 0.0 1.2 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold Benyvirus_P25 PF05744.11 ORF43822 - 0.015 14.6 1.1 0.017 14.4 1.0 1.2 1 1 0 1 1 1 0 Benyvirus P25/P26 protein zn-ribbon_14 PF16503.5 ORF43822 - 0.19 11.3 1.5 0.35 10.4 1.5 1.5 1 0 0 1 1 1 0 Zinc-ribbon PPDK_N PF01326.19 ORF43664 - 0.084 12.1 2.7 0.082 12.2 2.7 1.1 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Neuregulin PF02158.15 ORF43664 - 0.92 8.8 4.2 0.95 8.7 4.2 1.0 1 0 0 1 1 1 0 Neuregulin intracellular region MADF_DNA_bdg PF10545.9 ORF43664 - 0.93 9.9 6.1 0.23 11.8 1.1 2.0 2 0 0 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like PhrC_PhrF PF11131.8 ORF43519 - 1.3 8.7 5.7 2.7 7.6 0.9 2.6 2 1 0 2 2 2 0 Rap-phr extracellular signalling TPR_MLP1_2 PF07926.12 ORF43438 - 0.0092 16.0 1.1 0.0092 16.0 1.1 1.4 2 0 0 2 2 2 1 TPR/MLP1/MLP2-like protein AA_kinase PF00696.28 ORF43123 - 7.6e-10 38.8 0.0 9.1e-10 38.5 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family CECR6_TMEM121 PF14997.6 ORF42929 - 0.017 15.0 2.7 0.018 14.8 2.7 1.1 1 0 0 1 1 1 0 CECR6/TMEM121 family DUF997 PF06196.12 ORF42639 - 0.11 12.5 0.2 0.14 12.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF997) Mg_chelatase_C PF13335.6 ORF42520 - 0.0086 16.7 0.0 0.0098 16.5 0.0 1.1 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI C-terminal NPM1-C PF16276.5 ORF42520 - 0.026 14.5 2.3 0.041 13.8 2.3 1.5 1 0 0 1 1 1 0 Nucleophosmin C-terminal domain HSBP1 PF06825.12 ORF42520 - 0.89 9.5 3.9 4.5 7.2 3.9 2.0 1 1 0 1 1 1 0 Heat shock factor binding protein 1 RgpF PF05045.12 ORF42405 - 0.013 14.3 0.1 0.015 14.1 0.1 1.0 1 0 0 1 1 1 0 Rhamnan synthesis protein F Corona_nucleoca PF00937.18 ORF41312 - 0.21 10.6 21.2 0.15 11.1 19.3 1.6 1 1 1 2 2 2 0 Coronavirus nucleocapsid protein AP3D1 PF06375.11 ORF41270 - 0.18 12.1 11.0 0.2 11.9 11.0 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 PRR20 PF15708.5 ORF41270 - 1.2 9.0 5.1 1.3 8.9 5.1 1.1 1 0 0 1 1 1 0 Proline-rich protein family 20 DUF5389 PF17364.2 ORF41221 - 0.0067 16.5 7.5 0.43 10.7 1.8 2.0 1 1 1 2 2 2 2 Family of unknown function (DUF5389) MORN PF02493.20 ORF41035 - 3.5e-08 32.9 0.3 3.5e-08 32.9 0.3 2.7 3 0 0 3 3 3 1 MORN repeat MRP-S22 PF10245.9 ORF40517 - 0.012 15.4 0.1 0.013 15.2 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S22 MRF_C1 PF13887.6 ORF40051 - 0.16 11.1 0.4 0.33 10.2 0.0 1.7 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 NHL PF01436.21 ORF39849 - 0.019 15.0 0.0 0.036 14.1 0.0 1.5 1 0 0 1 1 1 0 NHL repeat DUF728 PF05304.12 ORF39384 - 0.028 14.3 1.4 0.029 14.2 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) LOH1CR12 PF10158.9 ORF39384 - 0.051 13.6 6.3 0.095 12.7 6.2 1.6 1 1 0 1 1 1 0 Tumour suppressor protein Alpha_kinase PF02816.18 ORF39384 - 0.3 11.2 3.1 0.34 11.0 3.1 1.1 1 0 0 1 1 1 0 Alpha-kinase family DUF4440 PF14534.6 ORF38849 - 0.00025 21.4 0.0 0.00026 21.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF38849 - 0.0045 17.6 0.0 0.0053 17.4 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 ORF38849 - 0.13 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like domain Claudin_3 PF06653.11 ORF38772 - 0.42 10.5 5.5 0.54 10.2 5.5 1.1 1 0 0 1 1 1 0 Tight junction protein, Claudin-like DUF3337 PF11816.8 ORF38653 - 0.00017 21.5 0.2 0.00025 20.9 0.0 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF3337) RAWUL PF16207.5 ORF38653 - 0.0002 22.0 0.0 0.00027 21.5 0.0 1.2 1 0 0 1 1 1 1 RAWUL domain RING finger- and WD40-associated ubiquitin-like PB1-F2 PF11986.8 ORF36192 - 0.015 15.5 0.4 0.022 15.0 0.3 1.4 1 1 0 1 1 1 0 Influenza A Proapoptotic protein zf-CCCH PF00642.24 ORF35616 - 1.6e-07 31.1 1.6 2.2e-07 30.6 1.6 1.2 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF35616 - 0.0015 18.5 1.8 0.0026 17.8 1.8 1.4 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 ORF35616 - 0.013 16.2 0.2 0.018 15.7 0.2 1.3 1 0 0 1 1 1 0 Torus domain zf-CCCH_4 PF18044.1 ORF35616 - 0.27 11.1 3.0 0.4 10.5 3.0 1.3 1 0 0 1 1 1 0 CCCH-type zinc finger YqjK PF13997.6 ORF35351 - 0.035 14.3 0.4 0.55 10.5 0.0 2.2 2 0 0 2 2 2 0 YqjK-like protein Chordopox_A33R PF05966.12 ORF34911 - 0.032 13.5 2.9 0.039 13.2 2.9 1.1 1 0 0 1 1 1 0 Chordopoxvirus A33R protein ATP-synt_8 PF00895.20 ORF34911 - 1.4 9.4 7.4 0.55 10.7 4.6 1.7 2 0 0 2 2 2 0 ATP synthase protein 8 UPF0220 PF05255.11 ORF34498 - 0.022 14.3 0.1 0.022 14.3 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) HATPase_c PF02518.26 ORF33478 - 2.8e-15 56.8 0.4 3.1e-15 56.6 0.4 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF33478 - 0.0021 17.9 0.1 0.0023 17.8 0.1 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sec61_beta PF03911.16 ORF33439 - 1.9e-16 59.8 0.2 2.4e-16 59.4 0.2 1.2 1 0 0 1 1 1 1 Sec61beta family FliD_C PF07195.12 ORF33422 - 0.14 11.6 0.1 0.16 11.3 0.1 1.0 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus RepA_C PF04796.12 ORF33282 - 0.054 13.5 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Plasmid encoded RepA protein RRM_DME PF15628.6 ORF33282 - 0.092 12.9 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 RRM in Demeter MORN PF02493.20 ORF33161 - 3.1e-12 45.6 30.2 3.2e-05 23.6 2.8 4.1 4 0 0 4 4 4 3 MORN repeat FtsK_alpha PF17854.1 ORF31677 - 0.18 11.9 0.0 0.23 11.6 0.0 1.1 1 0 0 1 1 1 0 FtsK alpha domain E3_UFM1_ligase PF09743.9 ORF31584 - 0.012 15.3 0.2 0.012 15.3 0.2 1.1 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 DUF1435 PF07256.12 ORF31515 - 3e-35 120.1 10.4 3.6e-35 119.9 10.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1435) Hormone_3 PF00159.18 ORF31515 - 0.25 11.5 0.2 0.37 10.9 0.2 1.3 1 0 0 1 1 1 0 Pancreatic hormone peptide RBM39linker PF15519.6 ORF31137 - 0.084 14.0 1.2 0.16 13.1 1.2 1.4 1 1 0 1 1 1 0 linker between RRM2 and RRM3 domains in RBM39 protein TPR_12 PF13424.6 ORF31046 - 0.011 16.0 0.2 0.63 10.4 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF31046 - 0.024 14.7 0.1 6.8 7.0 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF31046 - 0.027 14.6 0.5 2.3 8.5 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat GP57 PF17594.2 ORF31046 - 0.083 12.7 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Phage Tail fiber assembly helper gene product 57 GLTP PF08718.11 ORF31046 - 0.088 13.1 2.1 3.2 8.0 0.3 2.0 1 1 1 2 2 2 0 Glycolipid transfer protein (GLTP) TSC22 PF01166.18 ORF31046 - 0.12 12.6 2.8 0.1 13.0 1.3 1.7 2 0 0 2 2 2 0 TSC-22/dip/bun family TPR_1 PF00515.28 ORF31046 - 0.14 12.0 1.3 11 6.0 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat XhlA PF10779.9 ORF31046 - 0.23 11.7 1.3 0.42 10.8 1.3 1.5 1 0 0 1 1 1 0 Haemolysin XhlA TPR_1 PF00515.28 ORF30416 - 7.9e-16 57.1 1.7 1.9e-08 33.8 0.5 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF30416 - 1.9e-14 52.5 1.2 5.1e-08 32.4 0.9 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF30416 - 1.1e-10 40.9 0.6 8.8e-06 25.5 0.3 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF30416 - 1.5e-08 34.1 1.1 0.00073 19.2 0.0 2.4 1 1 1 2 2 2 2 TPR repeat TPR_16 PF13432.6 ORF30416 - 4.5e-08 33.6 0.2 5e-08 33.5 0.2 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF30416 - 7.7e-08 32.4 0.3 7.7e-05 22.8 0.0 1.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF30416 - 7.6e-07 29.1 0.7 0.0002 21.5 0.1 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF30416 - 2.6e-06 27.7 0.3 0.014 16.0 0.2 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF30416 - 1.1e-05 25.9 3.9 0.00028 21.3 0.5 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF30416 - 5.4e-05 23.4 0.1 0.08 13.2 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF30416 - 0.00028 21.4 0.2 0.24 12.3 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat NARP1 PF12569.8 ORF30416 - 0.0038 16.2 0.9 0.0045 16.0 0.9 1.1 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 ANAPC3 PF12895.7 ORF30416 - 0.0073 16.5 0.1 0.0094 16.2 0.1 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 ORF30416 - 0.026 13.7 0.2 0.041 13.1 0.2 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF30416 - 0.026 14.4 0.6 4.2 7.4 0.1 2.8 1 1 2 3 3 3 0 Tetratricopeptide repeat DUF3808 PF10300.9 ORF30416 - 0.03 13.1 0.1 0.036 12.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3808) Chorion_2 PF03964.15 ORF30189 - 0.31 11.9 0.8 0.37 11.7 0.8 1.2 1 0 0 1 1 1 0 Chorion family 2 Lustrin_cystein PF14625.6 ORF29052 - 0.08 13.3 5.5 0.08 13.3 5.5 1.9 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain PH_8 PF15409.6 ORF28827 - 0.00071 19.8 0.0 0.00082 19.6 0.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain DUF641 PF04859.12 ORF28771 - 0.0017 18.7 1.7 0.0024 18.2 1.7 1.3 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) Csm1_N PF18504.1 ORF28771 - 0.043 14.1 3.4 0.061 13.7 3.0 1.5 1 1 0 1 1 1 0 Csm1 N-terminal domain DivIC PF04977.15 ORF28771 - 0.051 13.3 2.7 0.075 12.8 2.6 1.5 1 1 0 1 1 1 0 Septum formation initiator DUF4709 PF15821.5 ORF28771 - 0.078 13.3 5.5 0.096 13.0 5.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4709) Fzo_mitofusin PF04799.13 ORF28771 - 0.083 12.4 2.1 0.099 12.2 2.1 1.1 1 0 0 1 1 1 0 fzo-like conserved region DUF3987 PF13148.6 ORF28771 - 0.46 9.5 3.2 0.5 9.3 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Cellulose_synt PF03552.14 ORF28771 - 0.46 8.9 2.8 0.44 9.0 2.8 1.0 1 0 0 1 1 1 0 Cellulose synthase Pox_A_type_inc PF04508.12 ORF28771 - 1.5 8.8 5.1 1.7 8.6 0.5 2.9 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat CLTH PF10607.9 ORF28764 - 0.096 12.6 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain EAV_GS PF01309.18 ORF28472 - 0.015 14.9 0.2 0.018 14.7 0.2 1.1 1 0 0 1 1 1 0 Equine arteritis virus small envelope glycoprotein Adaptin_N PF01602.20 ORF28404 - 5.3e-17 61.6 0.7 5.6e-17 61.5 0.7 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Dzip-like_N PF13815.6 ORF28404 - 0.049 13.6 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal IATP PF04568.12 ORF28030 - 2.9 8.4 5.5 2.6 8.5 4.5 1.4 1 1 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP PRR18 PF15671.5 ORF28030 - 4 7.2 10.0 4.5 7.1 10.0 1.1 1 0 0 1 1 1 0 Proline-rich protein family 18 Proteasom_Rpn13 PF04683.13 ORF27606 - 0.14 12.7 0.6 4 8.0 0.0 2.6 1 1 2 3 3 3 0 Proteasome complex subunit Rpn13 ubiquitin receptor Proton_antipo_M PF00361.20 ORF27383 - 0.028 13.6 10.6 0.029 13.6 10.6 1.1 1 0 0 1 1 1 0 Proton-conducting membrane transporter FAD_binding_5 PF00941.21 ORF27177 - 0.042 13.6 0.1 0.042 13.6 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain in molybdopterin dehydrogenase TSC22 PF01166.18 ORF26240 - 0.14 12.5 0.5 0.14 12.5 0.5 2.0 2 0 0 2 2 2 0 TSC-22/dip/bun family DivIC PF04977.15 ORF26240 - 0.25 11.2 0.1 0.25 11.2 0.1 2.1 2 0 0 2 2 2 0 Septum formation initiator YebO PF13974.6 ORF26240 - 0.6 10.2 4.6 2.3 8.4 2.7 2.0 2 0 0 2 2 2 0 YebO-like protein ACBP PF00887.19 ORF25993 - 4.7e-05 23.5 0.1 7.2e-05 22.9 0.1 1.5 1 0 0 1 1 1 1 Acyl CoA binding protein 7TM_GPCR_Srw PF10324.9 ORF25993 - 0.092 12.0 0.2 0.092 12.0 0.2 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srw Laminin_N PF00055.17 ORF25792 - 0.21 11.1 0.1 0.31 10.6 0.0 1.3 2 0 0 2 2 2 0 Laminin N-terminal (Domain VI) Lactamase_B_3 PF13483.6 ORF25324 - 0.0012 18.8 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain NTP_transf_5 PF14907.6 ORF25210 - 0.043 13.4 0.7 0.043 13.4 0.7 1.0 1 0 0 1 1 1 0 Uncharacterised nucleotidyltransferase Foie-gras_1 PF11817.8 ORF24942 - 0.00073 19.2 0.1 0.00093 18.9 0.1 1.1 1 0 0 1 1 1 1 Foie gras liver health family 1 PGPGW PF09656.10 ORF24427 - 3.9 7.0 6.6 0.29 10.7 1.2 1.8 2 1 0 2 2 2 0 Putative transmembrane protein (PGPGW) Metallophos_C PF14008.6 ORF23194 - 0.002 18.9 0.0 0.0028 18.5 0.0 1.2 1 0 0 1 1 1 1 Iron/zinc purple acid phosphatase-like protein C PH_8 PF15409.6 ORF2220 - 0.00071 19.8 0.0 0.00082 19.6 0.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain NTR PF01759.21 ORF22128 - 0.13 12.1 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 UNC-6/NTR/C345C module GH-E PF14410.6 ORF22128 - 0.17 12.3 1.4 0.53 10.7 0.1 2.1 2 1 0 2 2 2 0 HNH/ENDO VII superfamily nuclease with conserved GHE residues VirC2 PF07181.11 ORF21853 - 0.055 12.9 0.3 0.061 12.8 0.3 1.1 1 0 0 1 1 1 0 VirC2 protein Apelin PF15360.6 ORF20510 - 0.83 10.3 4.9 1.4 9.5 4.2 1.7 1 1 0 1 1 1 0 APJ endogenous ligand Pkinase PF00069.25 ORF20062 - 4.2e-12 46.0 0.0 4.2e-12 46.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF20062 - 4.1e-05 23.0 0.0 4.2e-05 22.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DotU PF09850.9 ORF19848 - 0.33 10.7 1.9 0.38 10.4 1.9 1.1 1 0 0 1 1 1 0 Type VI secretion system protein DotU DUF5506 PF17611.2 ORF18872 - 0.023 14.6 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5506) DUF5506 PF17611.2 ORF18413 - 0.023 14.6 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5506) FYVE PF01363.21 ORF17589 - 0.00014 21.9 2.2 0.00018 21.6 2.2 1.2 1 1 0 1 1 1 1 FYVE zinc finger ZZ PF00569.17 ORF17589 - 0.018 14.9 5.6 0.063 13.1 6.0 1.7 2 0 0 2 2 2 0 Zinc finger, ZZ type Tnp_zf-ribbon_2 PF13842.6 ORF17589 - 4.7 8.1 12.9 0.32 11.8 8.1 1.6 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon Phage_Coat_B PF05356.11 ORF17236 - 0.085 12.8 0.4 0.11 12.4 0.4 1.3 1 0 0 1 1 1 0 Phage Coat protein B PhrC_PhrF PF11131.8 ORF16784 - 1.3 8.7 5.7 2.7 7.6 0.9 2.6 2 1 0 2 2 2 0 Rap-phr extracellular signalling DUF1430 PF07242.11 ORF16402 - 0.037 14.3 3.3 0.042 14.1 3.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1430) TTL PF03133.15 ORF16030 - 1.1e-12 47.7 0.0 1.2e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF16030 - 1.8e-05 24.2 0.0 2e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF16030 - 0.012 14.9 0.1 0.013 14.7 0.1 1.1 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp RimK PF08443.11 ORF16030 - 0.047 13.3 0.1 0.084 12.5 0.1 1.5 1 1 1 2 2 2 0 RimK-like ATP-grasp domain Ribosomal_S3_C PF00189.20 ORF14891 - 5.5e-06 26.8 0.1 7.1e-06 26.5 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain DUF3910 PF13049.6 ORF14815 - 0.2 12.0 0.0 0.25 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Ribosomal_L7Ae PF01248.26 ORF1455 - 4.3e-22 77.7 0.0 4.6e-22 77.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DPBB_1 PF03330.18 ORF1455 - 0.027 14.8 0.1 3.1 8.1 0.1 2.1 1 1 1 2 2 2 0 Lytic transglycolase Hydrolase_6 PF13344.6 ORF1455 - 0.032 14.3 0.0 0.038 14.1 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF1158 PF06643.11 ORF1449 - 0.0088 16.5 0.1 0.013 16.0 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1158) Vps55 PF04133.14 ORF1449 - 0.011 15.6 0.3 0.014 15.3 0.3 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting 55 TIG PF01833.24 ORF1444 - 3.3e-05 23.9 0.2 4.2e-05 23.5 0.2 1.2 1 0 0 1 1 1 1 IPT/TIG domain Kelch_5 PF13854.6 ORF1444 - 0.06 13.4 0.5 0.1 12.6 0.5 1.4 1 0 0 1 1 1 0 Kelch motif Kelch_1 PF01344.25 ORF1444 - 0.12 12.0 0.1 0.2 11.3 0.1 1.4 1 0 0 1 1 1 0 Kelch motif Kelch_6 PF13964.6 ORF1444 - 0.13 12.6 0.2 0.22 11.9 0.2 1.4 1 0 0 1 1 1 0 Kelch motif UPA PF17217.3 ORF1444 - 0.23 11.4 0.0 0.27 11.1 0.0 1.0 1 0 0 1 1 1 0 UPA domain UCH PF00443.29 ORF14160 - 8.3e-17 61.5 4.1 9e-17 61.4 4.1 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF14160 - 3.8e-05 23.4 0.7 4.5e-05 23.2 0.7 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UPF0193 PF05250.11 ORF1398 - 0.045 13.5 1.7 0.052 13.3 1.7 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0193) Response_reg PF00072.24 ORF13591 - 1.1e-15 57.7 0.2 1.3e-15 57.6 0.2 1.0 1 0 0 1 1 1 1 Response regulator receiver domain NBD94 PF16830.5 ORF13591 - 0.13 12.6 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Nucleotide-Binding Domain 94 of RH FtsJ PF01728.19 ORF13591 - 0.15 12.2 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 FtsJ-like methyltransferase Peptidase_C80 PF11713.8 ORF13025 - 0.13 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Peptidase C80 family DUF4367 PF14285.6 ORF1239 - 0.055 13.9 2.6 0.059 13.8 2.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4367) DUF4035 PF13227.6 ORF12058 - 0.015 15.0 0.5 3.4 7.4 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4035) DUF2285 PF10074.9 ORF11602 - 0.027 15.1 0.0 0.036 14.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) DUF1471 PF07338.13 ORF11436 - 2.4e-13 49.8 0.3 3.3e-13 49.4 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF4156 PF13698.6 ORF11436 - 0.0059 16.9 0.2 0.0077 16.5 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4156) PGM_PMM_II PF02879.16 ORF11436 - 0.012 16.2 0.0 0.014 16.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ferrochelatase PF00762.19 ORF11436 - 0.013 14.6 0.0 0.015 14.4 0.0 1.0 1 0 0 1 1 1 0 Ferrochelatase KH_dom-like PF14714.6 ORF11360 - 7.2e-18 64.7 0.0 9.2e-18 64.3 0.0 1.1 1 0 0 1 1 1 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DAGK_cat PF00781.24 ORF11306 - 1.1e-10 41.2 0.0 1.3e-10 40.9 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain DREV PF05219.12 ORF11306 - 0.099 11.7 0.0 0.11 11.6 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase EF-hand_1 PF00036.32 ORF112229 - 1.1e-05 24.6 0.0 0.024 14.2 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF112229 - 2.1e-05 24.1 0.0 0.24 11.4 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF112229 - 4.3e-05 23.3 0.0 6.7e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF112229 - 8.3e-05 23.0 0.0 0.00011 22.5 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_4 PF12763.7 ORF112229 - 0.00043 20.2 0.0 0.00049 20.0 0.0 1.3 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Acetyltransf_1 PF00583.25 ORF111736 - 1.2e-11 44.8 0.1 1.6e-11 44.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF111736 - 6.4e-08 32.9 0.0 8.1e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF111736 - 1.6e-07 31.3 0.0 1.9e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF111736 - 4.8e-07 29.6 0.1 5.7e-07 29.4 0.1 1.1 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF111736 - 0.00042 20.4 0.0 0.00057 20.0 0.0 1.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF111736 - 0.00056 19.6 0.0 0.00066 19.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF111736 - 0.016 15.4 0.0 0.022 14.9 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 ORF111736 - 0.019 15.6 0.0 0.023 15.4 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Gly_acyl_tr_C PF08444.10 ORF111736 - 0.13 12.5 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region Chordopox_A33R PF05966.12 ORF111674 - 0.032 13.5 2.9 0.039 13.2 2.9 1.1 1 0 0 1 1 1 0 Chordopoxvirus A33R protein ATP-synt_8 PF00895.20 ORF111674 - 1.4 9.4 7.4 0.55 10.7 4.6 1.7 2 0 0 2 2 2 0 ATP synthase protein 8 4HBT_3 PF13622.6 ORF109860 - 0.016 15.5 0.0 0.018 15.3 0.0 1.0 1 0 0 1 1 1 0 Thioesterase-like superfamily TPM_phosphatase PF04536.14 ORF109328 - 0.0025 18.0 0.0 0.0031 17.7 0.0 1.1 1 0 0 1 1 1 1 TPM domain DUF4212 PF13937.6 ORF109034 - 0.12 12.8 4.2 0.055 13.9 2.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) DUF1752 PF08550.10 ORF108596 - 0.084 12.7 2.0 0.084 12.7 2.0 1.6 1 1 0 1 1 1 0 Fungal protein of unknown function (DUF1752) DUF4212 PF13937.6 ORF108541 - 0.12 12.8 4.2 0.055 13.9 2.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) EF-hand_1 PF00036.32 ORF107158 - 3e-15 54.5 4.0 3.6e-08 32.4 0.3 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF107158 - 5e-12 46.1 3.2 1.7e-06 28.3 0.1 2.0 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF107158 - 2.8e-11 43.1 3.9 7.5e-08 32.1 0.1 2.6 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF107158 - 1.6e-10 40.0 2.9 7.7e-05 22.3 0.3 2.6 2 1 0 2 2 2 2 EF-hand domain EF-hand_9 PF14658.6 ORF107158 - 4.2e-06 27.0 0.0 0.009 16.3 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF107158 - 7.5e-06 25.2 3.0 0.0078 15.7 0.2 2.4 2 0 0 2 2 2 2 EF hand PMBR PF09373.10 ORF107158 - 0.0041 17.2 0.2 1 9.6 0.0 3.1 4 0 0 4 4 4 1 Pseudomurein-binding repeat Staphylokinase PF02821.16 ORF107158 - 0.0071 16.8 0.1 0.0083 16.6 0.1 1.1 1 0 0 1 1 1 1 Staphylokinase/Streptokinase family FlgD PF03963.14 ORF107158 - 0.032 14.5 0.0 0.045 14.1 0.0 1.2 1 0 0 1 1 1 0 Flagellar hook capping protein - N-terminal region SUB1_ProdP9 PF18213.1 ORF107158 - 0.084 12.7 0.5 0.46 10.4 0.0 2.0 1 1 0 2 2 2 0 SUB1 protease Prodomain ProdP9 LRR_4 PF12799.7 ORF106811 - 0.047 14.1 0.1 0.71 10.4 0.1 2.1 1 1 1 2 2 2 0 Leucine Rich repeats (2 copies) PHF12_MRG_bd PF16737.5 ORF106811 - 0.049 13.4 0.7 7.4 6.4 0.2 2.6 2 1 0 2 2 2 0 PHD finger protein 12 MRG binding domain DUF4441 PF14536.6 ORF106347 - 0.0047 17.1 0.3 0.0078 16.4 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4441) Herpes_LAMP2 PF06126.11 ORF106282 - 0.025 13.2 0.1 0.026 13.2 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 Senescence_reg PF04520.13 ORF106282 - 0.076 13.8 0.0 0.093 13.6 0.0 1.1 1 0 0 1 1 1 0 Senescence regulator IL23 PF16649.5 ORF105011 - 0.19 11.7 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Interleukin 23 subunit alpha zf-Sec23_Sec24 PF04810.15 ORF104919 - 0.039 14.0 0.5 0.091 12.8 0.5 1.6 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger EBV-NA3 PF05009.12 ORF104919 - 0.23 10.9 0.1 0.24 10.9 0.1 1.1 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) Phage_Coat_B PF05356.11 ORF104691 - 0.085 12.8 0.4 0.11 12.4 0.4 1.3 1 0 0 1 1 1 0 Phage Coat protein B DUF2243 PF10002.9 ORF103635 - 0.025 14.7 0.0 0.029 14.5 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2243) DUF2448 PF10476.9 ORF103601 - 0.07 13.0 2.2 0.086 12.7 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2448) DUF1482 PF07358.11 ORF103539 - 2.5e-34 117.0 0.3 3e-34 116.7 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1482) Sep15_SelM PF08806.11 ORF103227 - 0.0037 17.4 0.0 0.0049 17.0 0.0 1.2 1 0 0 1 1 1 1 Sep15/SelM redox domain Mac PF12464.8 ORF103227 - 0.057 13.7 0.1 0.085 13.1 0.1 1.3 1 0 0 1 1 1 0 Maltose acetyltransferase TrkA_N PF02254.18 ORF103130 - 0.076 13.3 0.0 0.087 13.1 0.0 1.1 1 0 0 1 1 1 0 TrkA-N domain Glu_synthase PF01645.17 ORF103052 - 0.04 13.0 0.1 0.046 12.9 0.1 1.1 1 0 0 1 1 1 0 Conserved region in glutamate synthase MukB PF04310.12 ORF103032 - 0.054 13.3 0.1 0.062 13.1 0.1 1.0 1 0 0 1 1 1 0 MukB N-terminal bZIP_1 PF00170.21 ORF102700 - 2.4e-09 37.2 10.5 2.4e-09 37.2 10.5 1.9 1 1 0 2 2 2 1 bZIP transcription factor bZIP_2 PF07716.15 ORF102700 - 7.7e-07 29.1 6.9 1.4e-06 28.3 6.9 1.5 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_Maf PF03131.17 ORF102700 - 0.0011 19.4 5.8 0.0011 19.4 5.8 2.0 1 1 1 2 2 2 1 bZIP Maf transcription factor DUF4748 PF15932.5 ORF102700 - 7.9 6.3 7.9 7.5 6.4 1.5 2.5 1 1 0 2 2 2 0 Domain of unknown function (DUF4748) DUF5538 PF17692.1 ORF102673 - 0.075 13.1 2.0 0.088 12.9 2.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) Virul_fac_BrkB PF03631.15 ORF102537 - 0.014 15.0 2.7 0.015 15.0 2.7 1.0 1 0 0 1 1 1 0 Virulence factor BrkB Pex24p PF06398.11 ORF102537 - 0.017 14.1 1.4 0.02 13.9 1.4 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF3112 PF11309.8 ORF102537 - 0.019 14.5 2.1 0.023 14.1 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) Chromo PF00385.24 ORF102395 - 1.6e-14 53.5 1.4 2.3e-14 53.0 1.4 1.3 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain DUF4212 PF13937.6 ORF102322 - 0.12 12.8 4.2 0.055 13.9 2.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) Lactamase_B_3 PF13483.6 ORF101880 - 0.0012 18.8 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain UPF0184 PF03670.13 ORF101500 - 0.0041 17.5 1.7 0.0044 17.4 0.1 1.7 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0184) BRE1 PF08647.11 ORF101390 - 0.0084 16.2 1.8 0.0092 16.0 1.8 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Plant_NMP1 PF06694.11 ORF101390 - 0.066 12.3 0.1 0.075 12.1 0.1 1.1 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) BES1_N PF05687.13 ORF101102 - 0.012 16.0 0.1 0.013 15.9 0.1 1.2 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal Acp26Ab PF05777.12 ORF100938 - 1.4 9.6 5.1 2 9.1 5.1 1.2 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) Cbl_N3 PF02762.14 NODE_61205_length_268_cov_1.197425_g53265_i0reverse_frame_1 - 0.13 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, SH2-like domain DUF2774 PF11242.8 NODE_61201_length_268_cov_1.253219_g53261_i0forward_frame_1 - 0.021 15.0 0.2 0.045 13.9 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2774) DUF1414 PF07208.11 NODE_61201_length_268_cov_1.253219_g53261_i0forward_frame_1 - 0.025 14.6 0.1 0.04 13.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1414) DUF3573 PF12097.8 NODE_61187_length_268_cov_1.527897_g53247_i0forward_frame_1 - 0.028 13.3 0.6 0.028 13.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) Peptidase_M60_C PF18630.1 NODE_61178_length_268_cov_1.673820_g53238_i0reverse_frame_1 - 0.098 12.8 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Peptidase M60 C-terminal domain YbhQ PF11076.8 NODE_61166_length_268_cov_1.939914_g53226_i0reverse_frame_1 - 1.3e-16 60.9 5.2 1.7e-16 60.5 5.2 1.2 1 0 0 1 1 1 1 Putative inner membrane protein YbhQ Helicase_C PF00271.31 NODE_61160_length_268_cov_2.047210_g53220_i0forward_frame_1 - 2.9e-28 98.4 0.2 3.3e-28 98.3 0.2 1.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 NODE_61160_length_268_cov_2.047210_g53220_i0forward_frame_1 - 0.043 13.0 0.0 0.044 13.0 0.0 1.1 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase DUF918 PF06033.11 NODE_61159_length_268_cov_2.047210_g53219_i0forward_frame_1 - 0.05 13.6 1.2 0.072 13.1 1.2 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF918) HTH_49 PF18010.1 NODE_61158_length_268_cov_2.064378_g53218_i0reverse_frame_1 - 0.2 11.6 0.0 0.28 11.1 0.0 1.2 1 0 0 1 1 1 0 Cry35Ab1 HTH C-terminal domain Kinesin PF00225.23 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_1 - 2.4e-34 118.8 0.3 2.6e-34 118.7 0.3 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_1 - 4.8e-21 75.3 0.1 5.1e-21 75.2 0.1 1.0 1 0 0 1 1 1 1 Microtubule binding Bac_DnaA PF00308.18 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_1 - 0.065 13.1 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein PIF1 PF05970.14 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_1 - 0.077 12.2 0.1 0.1 11.8 0.1 1.2 1 0 0 1 1 1 0 PIF1-like helicase DUF2756 PF10956.8 NODE_61155_length_268_cov_2.115880_g53215_i0forward_frame_1 - 0.00082 19.8 6.0 0.00092 19.7 6.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2756) SHR-BD PF06650.12 NODE_61152_length_268_cov_2.154506_g53212_i0reverse_frame_1 - 0.0076 15.7 0.0 0.008 15.6 0.0 1.0 1 0 0 1 1 1 1 SHR-binding domain of vacuolar-sorting associated protein 13 Podoplanin PF05808.11 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_1 - 0.039 14.1 0.0 0.046 13.8 0.0 1.1 1 0 0 1 1 1 0 Podoplanin ShK PF01549.24 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_1 - 0.52 10.9 9.5 0.38 11.3 7.8 1.7 1 1 0 1 1 1 0 ShK domain-like DUF326 PF03860.16 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_1 - 0.59 10.2 6.7 3.4 7.8 2.4 2.3 2 0 0 2 2 2 0 Domain of Unknown Function (DUF326) Nucleoside_tran PF01733.18 NODE_61148_length_268_cov_2.214592_g53208_i0reverse_frame_1 - 0.00016 21.2 2.9 0.00018 21.0 2.9 1.0 1 0 0 1 1 1 1 Nucleoside transporter V4R PF02830.18 NODE_61143_length_268_cov_2.330472_g53203_i0reverse_frame_1 - 0.084 12.9 3.8 1.1 9.3 0.1 2.9 2 1 1 3 3 3 0 V4R domain N6_Mtase PF02384.16 NODE_61139_length_268_cov_2.420601_g53199_i0reverse_frame_1 - 0.13 11.5 1.1 0.14 11.4 1.1 1.1 1 0 0 1 1 1 0 N-6 DNA Methylase KaiA PF07688.12 NODE_61138_length_268_cov_2.429185_g53198_i0reverse_frame_1 - 0.0098 16.0 0.1 0.012 15.7 0.1 1.2 1 0 0 1 1 1 1 KaiA C-terminal domain Radical_SAM_C PF16199.5 NODE_61138_length_268_cov_2.429185_g53198_i0forward_frame_1 - 0.024 14.6 0.1 0.028 14.4 0.1 1.1 1 0 0 1 1 1 0 Radical_SAM C-terminal domain Lamprin PF06403.11 NODE_61135_length_268_cov_2.459227_g53195_i0forward_frame_1 - 0.013 15.5 7.9 0.015 15.2 7.9 1.1 1 0 0 1 1 1 0 Lamprin WD40 PF00400.32 NODE_61131_length_268_cov_2.510730_g53191_i0forward_frame_1 - 4e-07 30.6 0.0 0.3 12.0 0.0 3.1 3 0 0 3 3 3 3 WD domain, G-beta repeat ArfGap PF01412.18 NODE_61130_length_268_cov_2.583691_g53190_i0reverse_frame_1 - 0.011 15.8 0.0 0.02 15.0 0.0 1.5 1 1 0 1 1 1 0 Putative GTPase activating protein for Arf JSRP PF15312.6 NODE_61126_length_268_cov_2.819742_g53186_i0forward_frame_1 - 2.4 8.2 5.5 3.8 7.5 5.5 1.3 1 0 0 1 1 1 0 Junctional sarcoplasmic reticulum protein Herpes_UL73 PF03554.13 NODE_61122_length_268_cov_3.163090_g53182_i0reverse_frame_1 - 0.017 15.1 3.1 0.025 14.6 3.1 1.2 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein GMP_synt_C PF00958.22 NODE_61122_length_268_cov_3.163090_g53182_i0forward_frame_1 - 0.037 14.1 0.1 0.05 13.6 0.1 1.3 1 1 0 1 1 1 0 GMP synthase C terminal domain DUF1891 PF09004.10 NODE_61116_length_268_cov_4.351931_g53176_i0reverse_frame_1 - 2.1 8.0 6.0 0.45 10.2 0.3 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF1891) Peptidase_C92 PF05708.12 NODE_61116_length_268_cov_4.351931_g53176_i0forward_frame_1 - 0.011 15.8 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DUF1302 PF06980.11 NODE_61112_length_268_cov_33.600858_g53172_i0forward_frame_1 - 0.033 12.8 0.4 0.041 12.5 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1302) Poty_PP PF08440.10 NODE_61098_length_268_cov_70.643777_g53158_i0reverse_frame_1 - 0.055 12.5 0.1 0.064 12.3 0.1 1.1 1 0 0 1 1 1 0 Potyviridae polyprotein BCIP PF13862.6 NODE_61098_length_268_cov_70.643777_g53158_i0reverse_frame_1 - 0.065 13.0 0.2 0.071 12.9 0.2 1.1 1 0 0 1 1 1 0 p21-C-terminal region-binding protein TerY_C PF15616.6 NODE_61097_length_268_cov_70.982833_g53157_i0reverse_frame_1 - 0.024 14.7 0.1 0.031 14.4 0.1 1.2 1 0 0 1 1 1 0 TerY-C metal binding domain stn_TNFRSF12A PF12191.8 NODE_61095_length_268_cov_73.004292_g53155_i0forward_frame_1 - 0.01 16.1 0.0 0.012 15.8 0.0 1.1 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain DCAF17 PF15802.5 NODE_61094_length_268_cov_73.678112_g53154_i0reverse_frame_1 - 0.17 10.5 0.0 0.21 10.3 0.0 1.0 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 17 DUF4839 PF16127.5 NODE_61093_length_268_cov_76.103004_g53153_i0reverse_frame_1 - 0.046 13.8 0.4 0.05 13.7 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4839) NifZ PF04319.13 NODE_61093_length_268_cov_76.103004_g53153_i0reverse_frame_1 - 0.087 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 NifZ domain Ig_6 PF18452.1 NODE_61081_length_268_cov_127.793991_g53141_i0reverse_frame_1 - 0.0015 18.0 2.2 0.0029 17.1 1.6 1.7 2 0 0 2 2 2 1 Immunoglobulin domain AgrB PF04647.15 NODE_61080_length_268_cov_142.334764_g53140_i0reverse_frame_1 - 0.0042 16.4 0.4 0.0051 16.1 0.4 1.1 1 0 0 1 1 1 1 Accessory gene regulator B PIG-F PF06699.11 NODE_61080_length_268_cov_142.334764_g53140_i0reverse_frame_1 - 0.074 13.2 0.2 0.082 13.1 0.2 1.0 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F HARP PF07443.13 NODE_61080_length_268_cov_142.334764_g53140_i0reverse_frame_1 - 0.15 11.7 2.4 0.38 10.4 0.8 2.0 2 0 0 2 2 2 0 HepA-related protein (HARP) Dpy19 PF10034.9 NODE_61070_length_268_cov_587.244635_g53130_i0reverse_frame_1 - 0.08 11.1 7.2 0.084 11.1 7.2 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation GBP_PSP PF02425.15 NODE_61066_length_269_cov_1.021368_g53126_i0forward_frame_1 - 0.11 12.2 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Paralytic/GBP/PSP peptide # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks264.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks264.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks264.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks264.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:58:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3504 PF12012.8 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 0.2 11.6 8.5 0.23 11.4 8.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3504) SR-25 PF10500.9 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 0.22 11.1 30.1 0.23 11.0 30.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RNA_pol_Rpc4 PF05132.14 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 1.2 9.5 13.8 1.3 9.4 13.8 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 SspB PF04386.13 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 5.3 6.9 9.3 7 6.5 9.3 1.3 1 0 0 1 1 1 0 Stringent starvation protein B Toxin_5 PF05294.13 NODE_61055_length_269_cov_1.196581_g53115_i0reverse_frame_1 - 0.0044 17.4 1.1 0.0044 17.4 1.1 1.7 2 0 0 2 2 2 1 Scorpion short toxin DUF2072 PF09845.9 NODE_61055_length_269_cov_1.196581_g53115_i0reverse_frame_1 - 0.057 13.7 0.3 0.065 13.5 0.3 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein DUF4823 PF16105.5 NODE_61051_length_269_cov_1.269231_g53111_i0forward_frame_1 - 0.014 15.3 0.0 0.02 14.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4823) UT PF03253.14 NODE_61038_length_269_cov_1.491453_g53098_i0forward_frame_1 - 0.075 12.2 0.0 0.084 12.0 0.0 1.1 1 0 0 1 1 1 0 Urea transporter Cyclophil_like2 PF18050.1 NODE_61038_length_269_cov_1.491453_g53098_i0forward_frame_1 - 0.099 12.6 0.2 0.13 12.2 0.2 1.2 1 0 0 1 1 1 0 Cyclophilin-like family SlyX PF04102.12 NODE_61034_length_269_cov_1.529915_g53094_i0reverse_frame_1 - 0.15 12.7 0.7 1.3 9.7 0.1 2.1 1 1 1 2 2 2 0 SlyX Cation_efflux PF01545.21 NODE_61024_length_269_cov_1.679487_g53084_i0reverse_frame_1 - 0.00018 21.3 5.1 0.00022 21.0 5.1 1.1 1 0 0 1 1 1 1 Cation efflux family GlutR_dimer PF00745.20 NODE_61024_length_269_cov_1.679487_g53084_i0forward_frame_1 - 0.14 12.6 0.1 0.17 12.4 0.1 1.2 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain Glyco_transf_6 PF03414.13 NODE_61024_length_269_cov_1.679487_g53084_i0forward_frame_1 - 0.17 10.7 0.1 0.18 10.6 0.1 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 6 DUF3557 PF12078.8 NODE_61017_length_269_cov_1.739316_g53077_i0forward_frame_1 - 0.018 15.0 0.5 0.022 14.7 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3557) DUF229 PF02995.17 NODE_61007_length_269_cov_1.816239_g53067_i0forward_frame_1 - 2.4e-05 23.2 0.0 2.7e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF229) EF-hand_6 PF13405.6 NODE_61005_length_269_cov_1.829060_g53065_i0reverse_frame_1 - 0.00017 21.2 0.1 0.00029 20.5 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_61005_length_269_cov_1.829060_g53065_i0reverse_frame_1 - 0.011 15.2 0.0 0.018 14.5 0.0 1.4 1 0 0 1 1 1 0 EF hand DUF3175 PF11373.8 NODE_61005_length_269_cov_1.829060_g53065_i0reverse_frame_1 - 0.12 12.6 0.1 0.16 12.1 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3175) zf-CRD PF17979.1 NODE_61003_length_269_cov_1.850427_g53063_i0forward_frame_1 - 0.025 14.7 1.6 0.029 14.5 1.6 1.1 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions Pkinase PF00069.25 NODE_61000_length_269_cov_1.905983_g53060_i0forward_frame_1 - 8.2e-09 35.2 0.0 9.6e-09 35.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_61000_length_269_cov_1.905983_g53060_i0forward_frame_1 - 0.04 13.2 0.0 0.049 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase DUF1203 PF06718.11 NODE_60994_length_269_cov_2.089744_g53054_i0forward_frame_1 - 0.083 13.2 0.2 0.093 13.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1203) Viral_Hsp90 PF03225.14 NODE_60986_length_269_cov_2.282051_g53046_i0reverse_frame_1 - 0.051 12.1 0.0 0.055 12.0 0.0 1.0 1 0 0 1 1 1 0 Viral heat shock protein Hsp90 homologue LPD22 PF18834.1 NODE_60981_length_269_cov_2.376068_g53041_i0forward_frame_1 - 0.0069 16.6 0.1 0.009 16.2 0.1 1.1 1 0 0 1 1 1 1 Large polyvalent protein associated domain 22 QVR PF17064.5 NODE_60980_length_269_cov_2.478632_g53040_i0reverse_frame_1 - 0.076 13.3 3.5 0.089 13.0 3.5 1.1 1 0 0 1 1 1 0 Sleepless protein SmpA_OmlA PF04355.13 NODE_60976_length_269_cov_2.598291_g53036_i0reverse_frame_1 - 1.3e-10 40.9 0.0 1.6e-10 40.6 0.0 1.1 1 0 0 1 1 1 1 SmpA / OmlA family C2 PF00168.30 NODE_60973_length_269_cov_2.649573_g53033_i0reverse_frame_1 - 0.0037 17.5 0.0 0.0054 17.0 0.0 1.3 1 0 0 1 1 1 1 C2 domain DUF2012 PF09430.10 NODE_60972_length_269_cov_2.653846_g53032_i0reverse_frame_1 - 0.023 14.8 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2012) CPP1-like PF11833.8 NODE_60943_length_269_cov_43.893162_g53003_i0forward_frame_1 - 1.6 8.4 3.4 1.8 8.2 3.4 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like TRAM1 PF08390.11 NODE_60924_length_269_cov_73.102564_g52984_i0forward_frame_1 - 0.1 12.2 1.2 0.22 11.2 1.2 1.5 1 0 0 1 1 1 0 TRAM1-like protein Glutaredoxin2_C PF04399.13 NODE_60917_length_269_cov_100.358974_g52977_i0reverse_frame_1 - 0.11 12.3 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain Herpes_LMP1 PF05297.11 NODE_60910_length_269_cov_146.641026_g52970_i0forward_frame_1 - 9.4 5.3 7.6 10 5.2 7.6 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Pkinase PF00069.25 NODE_60892_length_269_cov_903.106838_g52952_i0forward_frame_1 - 0.0002 20.8 0.0 0.00025 20.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain S1-P1_nuclease PF02265.16 NODE_60889_length_269_cov_3564.004274_g52949_i0reverse_frame_1 - 0.00028 20.8 0.0 0.00036 20.4 0.0 1.2 1 0 0 1 1 1 1 S1/P1 Nuclease YflT PF11181.8 NODE_60889_length_269_cov_3564.004274_g52949_i0reverse_frame_1 - 0.06 13.9 0.1 0.073 13.6 0.1 1.2 1 0 0 1 1 1 0 Heat induced stress protein YflT TMEM37 PF15108.6 NODE_60883_length_270_cov_1.076596_g52943_i0reverse_frame_1 - 0.0037 17.2 0.0 0.0053 16.7 0.0 1.2 1 0 0 1 1 1 1 Voltage-dependent calcium channel gamma-like subunit protein family zf-RanBP PF00641.18 NODE_60870_length_270_cov_1.361702_g52930_i0reverse_frame_1 - 2.1 7.8 7.8 0.77 9.1 0.5 2.5 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others GFO_IDH_MocA PF01408.22 NODE_60869_length_270_cov_1.382979_g52929_i0reverse_frame_1 - 1.1e-09 39.1 0.0 1.4e-09 38.8 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DUF4567 PF15131.6 NODE_60869_length_270_cov_1.382979_g52929_i0reverse_frame_1 - 0.1 12.6 0.5 0.28 11.2 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4567) TipE PF16972.5 NODE_60868_length_270_cov_1.382979_g52928_i0forward_frame_1 - 0.027 13.7 0.1 0.028 13.6 0.1 1.1 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE Cullin PF00888.22 NODE_60861_length_270_cov_1.574468_g52921_i0reverse_frame_1 - 1.9e-09 36.7 1.7 2.1e-09 36.6 1.7 1.0 1 0 0 1 1 1 1 Cullin family FAP PF07174.11 NODE_60849_length_270_cov_1.770213_g52909_i0reverse_frame_1 - 3.2 7.1 12.5 3.5 7.0 12.5 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_60849_length_270_cov_1.770213_g52909_i0forward_frame_1 - 0.13 12.2 5.7 0.4 10.7 5.7 1.8 1 1 0 1 1 1 0 Lamprin Rubredoxin_2 PF18073.1 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 0.039 13.7 3.4 0.039 13.7 3.4 2.9 3 0 0 3 3 3 0 Rubredoxin metal binding domain HypA PF01155.19 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 0.49 10.4 7.9 0.45 10.5 5.1 1.9 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ogr_Delta PF04606.12 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 0.77 9.8 12.5 0.68 10.0 1.4 3.2 3 0 0 3 3 3 0 Ogr/Delta-like zinc finger Zn-ribbon_8 PF09723.10 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 0.99 9.6 14.2 0.58 10.3 0.9 3.3 2 1 2 4 4 4 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 2.4 7.7 12.5 3.6 7.1 0.1 3.7 4 0 0 4 4 4 0 zinc-ribbon domain NMD3 PF04981.13 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 3.3 7.1 5.2 2.9 7.3 0.8 2.0 2 0 0 2 2 2 0 NMD3 family zf-RRN7 PF11781.8 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 5.4 6.8 11.9 6.8 6.5 0.1 3.3 3 1 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 PhnA_Zn_Ribbon PF08274.12 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 9.7 6.3 13.2 0.35 10.8 0.6 2.9 4 0 0 4 4 4 0 PhnA Zinc-Ribbon zinc_ribbon_2 PF13240.6 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 9.7 6.1 13.5 3.3 7.6 1.1 3.5 4 0 0 4 4 4 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 NODE_60841_length_270_cov_1.953191_g52901_i0forward_frame_1 - 0.071 12.6 0.1 0.13 11.7 0.1 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding AAA_30 PF13604.6 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_1 - 2.6e-09 37.1 0.0 2.7e-09 37.0 0.0 1.0 1 0 0 1 1 1 1 AAA domain PIF1 PF05970.14 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_1 - 0.0018 17.5 0.5 0.0032 16.7 0.5 1.5 1 1 0 1 1 1 1 PIF1-like helicase Peptidase_C92 PF05708.12 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_1 - 0.026 14.6 0.0 0.031 14.4 0.0 1.1 1 0 0 1 1 1 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AAA_19 PF13245.6 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_1 - 0.044 14.1 0.2 0.056 13.8 0.2 1.2 1 0 0 1 1 1 0 AAA domain zf-C2H2 PF00096.26 NODE_60831_length_270_cov_2.102128_g52891_i0forward_frame_1 - 1.8e-07 31.2 2.1 0.0059 17.0 0.2 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_60831_length_270_cov_2.102128_g52891_i0forward_frame_1 - 0.00071 20.2 2.1 0.33 11.9 0.2 2.6 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_aberr PF17017.5 NODE_60831_length_270_cov_2.102128_g52891_i0forward_frame_1 - 0.047 13.8 1.0 0.049 13.8 0.3 1.4 2 0 0 2 2 2 0 Aberrant zinc-finger FOXP-CC PF16159.5 NODE_60831_length_270_cov_2.102128_g52891_i0forward_frame_1 - 0.056 14.1 0.3 0.15 12.7 0.1 1.8 2 0 0 2 2 2 0 FOXP coiled-coil domain zf-H2C2_2 PF13465.6 NODE_60831_length_270_cov_2.102128_g52891_i0forward_frame_1 - 2.2 8.9 10.9 9.9 6.8 0.0 3.5 3 1 0 3 3 3 0 Zinc-finger double domain PP2C PF00481.21 NODE_60830_length_270_cov_2.106383_g52890_i0reverse_frame_1 - 0.025 14.2 0.1 0.033 13.8 0.0 1.4 1 1 0 1 1 1 0 Protein phosphatase 2C SBF_like PF13593.6 NODE_60827_length_270_cov_2.225532_g52887_i0reverse_frame_1 - 3.3e-19 69.3 1.7 3.7e-19 69.2 1.7 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) DUF1275 PF06912.11 NODE_60827_length_270_cov_2.225532_g52887_i0reverse_frame_1 - 0.024 14.6 4.4 0.027 14.4 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1275) Tlr3_TMD PF17968.1 NODE_60827_length_270_cov_2.225532_g52887_i0reverse_frame_1 - 7.5 6.8 11.4 4 7.7 0.3 3.1 3 0 0 3 3 3 0 Toll-like receptor 3 trans-membrane domain DUF898 PF05987.13 NODE_60823_length_270_cov_2.404255_g52883_i0forward_frame_1 - 9.7e-13 47.9 4.7 1e-12 47.8 4.7 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF898) TfoX_N PF04993.13 NODE_60819_length_270_cov_2.634043_g52879_i0forward_frame_1 - 4.2e-07 30.1 0.1 5.9e-07 29.6 0.1 1.2 1 0 0 1 1 1 1 TfoX N-terminal domain TfoX_C PF04994.13 NODE_60819_length_270_cov_2.634043_g52879_i0forward_frame_1 - 1.2e-06 28.5 0.1 7e-06 26.0 0.0 2.0 2 1 0 2 2 2 1 TfoX C-terminal domain SBP_bac_5 PF00496.22 NODE_60817_length_270_cov_2.672340_g52877_i0reverse_frame_1 - 1e-12 47.7 0.0 1.2e-12 47.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Mucin PF01456.17 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_1 - 0.0086 16.1 13.4 0.013 15.5 13.4 1.2 1 0 0 1 1 1 1 Mucin-like glycoprotein DUF2207 PF09972.9 NODE_60809_length_270_cov_3.000000_g52869_i0forward_frame_1 - 4.5 5.9 6.2 4.7 5.8 6.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Methyltrn_RNA_4 PF09936.9 NODE_60801_length_270_cov_5.102128_g52861_i0forward_frame_1 - 0.052 13.4 0.0 0.059 13.2 0.0 1.0 1 0 0 1 1 1 0 SAM-dependent RNA methyltransferase Nramp PF01566.18 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_1 - 0.0021 17.1 2.0 0.0024 16.9 2.0 1.1 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein DUF4389 PF14333.6 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_1 - 0.14 12.1 7.7 0.23 11.4 7.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4389) Shisa PF13908.6 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_1 - 1.3 9.2 6.3 1.3 9.2 6.3 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF3357 PF11837.8 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_1 - 1.8 9.1 3.9 2.1 8.9 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) MTABC_N PF16185.5 NODE_60799_length_270_cov_15.774468_g52859_i0reverse_frame_1 - 0.03 13.8 0.0 0.034 13.7 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region zf-H2C2_2 PF13465.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_1 - 0.0024 18.2 3.5 0.0024 18.2 3.5 1.6 2 0 0 2 2 2 1 Zinc-finger double domain S_4TM PF18159.1 NODE_60791_length_270_cov_46.668085_g52851_i0forward_frame_1 - 0.017 14.4 0.1 0.019 14.3 0.1 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain LisH_2 PF16045.5 NODE_60782_length_270_cov_60.455319_g52842_i0reverse_frame_1 - 0.081 12.0 1.8 0.18 10.8 1.8 1.6 1 0 0 1 1 1 0 LisH zf-HC3 PF16827.5 NODE_60780_length_270_cov_62.157447_g52840_i0forward_frame_1 - 0.00077 19.6 2.7 0.37 11.0 0.6 2.3 2 0 0 2 2 2 2 zinc-finger DNA_processg_A PF02481.15 NODE_60771_length_270_cov_74.574468_g52831_i0reverse_frame_1 - 0.082 12.1 0.0 0.1 11.8 0.0 1.1 1 0 0 1 1 1 0 DNA recombination-mediator protein A DUF5426 PF17473.2 NODE_60763_length_270_cov_94.821277_g52823_i0forward_frame_1 - 0.02 15.2 0.1 0.027 14.8 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5426) P5-ATPase PF12409.8 NODE_60752_length_270_cov_182.046809_g52812_i0forward_frame_1 - 0.089 12.9 1.0 0.12 12.4 1.0 1.2 1 0 0 1 1 1 0 P5-type ATPase cation transporter zf-C3HC4_5 PF17121.5 NODE_60748_length_270_cov_236.489362_g52808_i0forward_frame_1 - 0.063 13.2 0.6 0.13 12.2 0.6 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RNA_pol_Rpb4 PF03874.16 NODE_60740_length_270_cov_518.838298_g52800_i0forward_frame_1 - 0.043 14.1 0.5 0.47 10.8 0.5 1.9 1 1 0 1 1 1 0 RNA polymerase Rpb4 OAD_gamma PF04277.13 NODE_60737_length_270_cov_1207.140426_g52797_i0reverse_frame_1 - 0.54 10.9 2.5 0.85 10.2 2.5 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain TMEM51 PF15345.6 NODE_60729_length_271_cov_1.182203_g52789_i0forward_frame_2 - 0.32 10.8 2.8 0.33 10.8 2.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 DUF2616 PF11077.8 NODE_60728_length_271_cov_1.182203_g52788_i0forward_frame_3 - 0.022 14.5 1.6 0.025 14.3 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2616) DUF4820 PF16091.5 NODE_60726_length_271_cov_1.279661_g52786_i0forward_frame_3 - 0.021 14.2 0.8 0.025 14.0 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) AGH PF17558.2 NODE_60726_length_271_cov_1.279661_g52786_i0forward_frame_3 - 0.049 13.8 0.4 0.063 13.4 0.4 1.1 1 0 0 1 1 1 0 Androgenic gland hormone DUF2721 PF11026.8 NODE_60726_length_271_cov_1.279661_g52786_i0forward_frame_3 - 1.5 8.7 2.7 0.67 9.8 0.4 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) Ndc1_Nup PF09531.10 NODE_60724_length_271_cov_1.330508_g52784_i0reverse_frame_2 - 0.24 10.0 3.7 0.25 10.0 3.7 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Tubulin_C PF03953.17 NODE_60723_length_271_cov_1.338983_g52783_i0reverse_frame_3 - 0.0029 17.8 0.0 0.0037 17.4 0.0 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Ligase_CoA PF00549.19 NODE_60718_length_271_cov_1.355932_g52778_i0forward_frame_2 - 2.7e-19 69.5 0.3 2.9e-19 69.4 0.3 1.0 1 0 0 1 1 1 1 CoA-ligase DUF2684 PF10885.8 NODE_60717_length_271_cov_1.398305_g52777_i0forward_frame_3 - 1.4 9.1 6.2 0.31 11.2 2.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2684) DUF1043 PF06295.12 NODE_60717_length_271_cov_1.398305_g52777_i0forward_frame_2 - 0.016 15.2 0.4 0.019 15.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) DUF1029 PF06269.12 NODE_60714_length_271_cov_1.508475_g52774_i0reverse_frame_3 - 0.0032 17.5 0.3 0.0078 16.3 0.3 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1029) DLIC PF05783.11 NODE_60714_length_271_cov_1.508475_g52774_i0forward_frame_2 - 0.18 10.6 0.4 0.21 10.4 0.4 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) DUF1408 PF07193.11 NODE_60710_length_271_cov_1.656780_g52770_i0forward_frame_2 - 0.043 13.9 0.1 0.071 13.2 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1408) MNSV_P7B PF06692.11 NODE_60703_length_271_cov_1.800847_g52763_i0reverse_frame_3 - 0.9 9.6 6.1 2.5 8.2 0.9 2.1 1 1 1 2 2 2 0 Melon necrotic spot virus P7B protein Glyco_hydro_11 PF00457.17 NODE_60703_length_271_cov_1.800847_g52763_i0reverse_frame_2 - 0.067 12.8 0.8 0.068 12.8 0.8 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 11 His_Phos_2 PF00328.22 NODE_60703_length_271_cov_1.800847_g52763_i0forward_frame_3 - 0.0092 15.4 0.0 0.0092 15.4 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Mo25 PF08569.11 NODE_60702_length_271_cov_1.805085_g52762_i0reverse_frame_3 - 0.0058 16.0 1.4 0.006 16.0 1.4 1.2 1 0 0 1 1 1 1 Mo25-like Ku_C PF03730.14 NODE_60702_length_271_cov_1.805085_g52762_i0reverse_frame_3 - 0.042 14.6 0.0 0.051 14.3 0.0 1.2 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm SNF PF00209.18 NODE_60701_length_271_cov_1.822034_g52761_i0reverse_frame_2 - 0.6 8.7 1.4 0.6 8.7 1.4 1.1 1 0 0 1 1 1 0 Sodium:neurotransmitter symporter family IPK PF03770.16 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_2 - 0.14 12.0 1.1 0.31 10.9 1.1 1.7 1 1 0 1 1 1 0 Inositol polyphosphate kinase Lamprin PF06403.11 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_2 - 0.4 10.6 7.1 0.58 10.1 2.3 2.0 1 1 1 2 2 2 0 Lamprin RAP1 PF07218.11 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_2 - 5.1 5.2 4.8 6.3 5.0 4.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Viral_P18 PF04521.13 NODE_60691_length_271_cov_2.135593_g52751_i0forward_frame_3 - 0.26 11.1 1.6 0.39 10.5 0.1 1.9 1 1 1 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein DUF4770 PF15994.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 0.014 15.6 5.9 0.018 15.3 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) Topoisom_I_N PF02919.15 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 0.026 14.0 5.0 0.031 13.8 5.0 1.1 1 0 0 1 1 1 0 Eukaryotic DNA topoisomerase I, DNA binding fragment DUF4834 PF16118.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 0.24 12.4 6.4 0.26 12.3 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Presenilin PF01080.17 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 1.1 7.9 5.1 1.1 7.9 5.1 1.0 1 0 0 1 1 1 0 Presenilin CSG2 PF16965.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 2.6 6.9 5.4 2.9 6.7 5.4 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator Otopetrin PF03189.13 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 4 6.2 8.9 4.5 6.0 8.9 1.0 1 0 0 1 1 1 0 Otopetrin Peptidase_S49_N PF08496.10 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 8.8 6.4 9.2 11 6.1 9.2 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Ipi1_N PF12333.8 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.053 14.1 3.9 0.058 14.0 3.9 1.1 1 0 0 1 1 1 0 Rix1 complex component involved in 60S ribosome maturation Connexin PF00029.19 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.39 10.4 6.4 0.4 10.4 6.4 1.1 1 0 0 1 1 1 0 Connexin Peptidase_S49_N PF08496.10 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.52 10.4 12.2 0.59 10.2 12.2 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF4834 PF16118.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.64 11.0 9.7 0.72 10.9 9.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Kei1 PF08552.11 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.81 9.5 4.2 0.82 9.5 4.2 1.1 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 CLN3 PF02487.17 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 1.7 7.6 5.9 1.8 7.6 5.9 1.0 1 0 0 1 1 1 0 CLN3 protein Presenilin PF01080.17 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 1.7 7.3 8.8 1.7 7.3 8.8 1.0 1 0 0 1 1 1 0 Presenilin Hydin_ADK PF17213.3 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 2.6 8.3 8.8 3 8.1 8.8 1.1 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain Folate_carrier PF01770.18 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 3.1 6.5 8.1 3.3 6.3 8.1 1.0 1 0 0 1 1 1 0 Reduced folate carrier Zip PF02535.22 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 5.3 6.2 7.0 5.4 6.1 7.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Orthoreo_P10 PF07204.11 NODE_60688_length_271_cov_2.165254_g52748_i0forward_frame_3 - 4.9 7.2 11.4 0.81 9.7 7.1 1.8 1 1 1 2 2 2 0 Orthoreovirus membrane fusion protein p10 DUF4131 PF13567.6 NODE_60688_length_271_cov_2.165254_g52748_i0forward_frame_2 - 7.2 6.2 12.4 7.8 6.1 12.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Glyco_transf_41 PF13844.6 NODE_60687_length_271_cov_2.173729_g52747_i0reverse_frame_2 - 0.14 10.5 0.1 0.16 10.4 0.1 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 41 DUF4167 PF13763.6 NODE_60685_length_271_cov_2.182203_g52745_i0reverse_frame_2 - 0.084 13.0 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4167) YesK PF14150.6 NODE_60682_length_271_cov_2.377119_g52742_i0reverse_frame_2 - 0.061 13.5 2.1 0.081 13.1 2.1 1.2 1 0 0 1 1 1 0 YesK-like protein DUF202 PF02656.15 NODE_60682_length_271_cov_2.377119_g52742_i0reverse_frame_2 - 0.11 12.9 0.1 0.14 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF202) SHP PF03579.13 NODE_60680_length_271_cov_2.461864_g52740_i0forward_frame_3 - 0.017 15.1 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Small hydrophobic protein EntA_Immun PF08951.10 NODE_60677_length_271_cov_2.487288_g52737_i0forward_frame_2 - 0.0053 17.1 0.8 0.007 16.7 0.8 1.2 1 0 0 1 1 1 1 Enterocin A Immunity DUF1241 PF06840.11 NODE_60677_length_271_cov_2.487288_g52737_i0forward_frame_2 - 0.068 12.8 0.1 0.07 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) Filaggrin PF03516.13 NODE_60676_length_271_cov_2.525424_g52736_i0forward_frame_2 - 3.5 8.4 15.3 4.2 8.2 0.3 2.2 2 0 0 2 2 2 0 Filaggrin DUF570 PF04489.13 NODE_60674_length_271_cov_2.639831_g52734_i0reverse_frame_2 - 0.066 11.8 0.1 0.069 11.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF570) NAS PF03059.16 NODE_60673_length_271_cov_2.711864_g52733_i0forward_frame_3 - 0.2 11.0 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Nicotianamine synthase protein RuvA_N PF01330.21 NODE_60669_length_271_cov_2.978814_g52729_i0forward_frame_2 - 2.5e-20 72.3 0.1 3.4e-20 71.9 0.1 1.1 1 0 0 1 1 1 1 RuvA N terminal domain Pkinase PF00069.25 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 3.9e-32 111.7 0.3 4.5e-32 111.5 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 2.8e-20 72.7 0.0 2.9e-20 72.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.00041 19.3 0.0 0.00044 19.1 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.0029 17.0 0.0 0.0062 15.9 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.0036 16.7 0.2 0.0047 16.3 0.2 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pox_ser-thr_kin PF05445.11 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.019 14.0 0.1 0.02 13.9 0.1 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase YrbL-PhoP_reg PF10707.9 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.056 13.0 0.0 0.061 12.8 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL OapA PF04225.12 NODE_60665_length_271_cov_3.733051_g52725_i0forward_frame_2 - 1.9e-28 98.4 0.0 2.2e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 Opacity-associated protein A LysM-like domain IgaA PF07095.11 NODE_60665_length_271_cov_3.733051_g52725_i0forward_frame_2 - 0.11 10.5 0.0 0.11 10.5 0.0 1.0 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA DUF4765 PF15962.5 NODE_60665_length_271_cov_3.733051_g52725_i0forward_frame_2 - 0.15 10.0 0.0 0.18 9.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4765) Pox_P35 PF03213.14 NODE_60662_length_271_cov_5.190678_g52722_i0forward_frame_2 - 0.4 9.9 1.1 0.45 9.7 1.1 1.0 1 0 0 1 1 1 0 Poxvirus P35 protein DUF669 PF05037.13 NODE_60661_length_271_cov_5.466102_g52721_i0reverse_frame_2 - 0.036 14.2 0.1 0.041 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF669) DUF3151 PF11349.8 NODE_60657_length_271_cov_34.868644_g52717_i0forward_frame_3 - 0.2 11.8 0.0 0.25 11.4 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3151) DUF656 PF04920.12 NODE_60657_length_271_cov_34.868644_g52717_i0forward_frame_2 - 0.14 12.1 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF656) zf-RRN7 PF11781.8 NODE_60657_length_271_cov_34.868644_g52717_i0forward_frame_2 - 0.2 11.4 2.2 0.35 10.6 2.2 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF3197 PF11432.8 NODE_60656_length_271_cov_38.288136_g52716_i0reverse_frame_3 - 0.16 11.8 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3197) IL6Ra-bind PF09240.10 NODE_60656_length_271_cov_38.288136_g52716_i0forward_frame_3 - 0.0074 16.7 0.2 0.0091 16.4 0.2 1.1 1 0 0 1 1 1 1 Interleukin-6 receptor alpha chain, binding Holin_SPP1 PF04688.13 NODE_60650_length_271_cov_49.597458_g52710_i0reverse_frame_3 - 0.022 14.9 0.2 0.038 14.2 0.2 1.4 1 0 0 1 1 1 0 SPP1 phage holin DUF4328 PF14219.6 NODE_60640_length_271_cov_59.902542_g52700_i0reverse_frame_3 - 0.038 13.5 0.0 0.044 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4328) PRA-CH PF01502.18 NODE_60639_length_271_cov_60.406780_g52699_i0reverse_frame_3 - 0.029 14.2 0.3 0.038 13.8 0.3 1.2 1 0 0 1 1 1 0 Phosphoribosyl-AMP cyclohydrolase DUF1856 PF08983.10 NODE_60639_length_271_cov_60.406780_g52699_i0forward_frame_2 - 0.32 11.3 6.4 0.39 11.0 4.6 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF1856) SRP40_C PF05022.12 NODE_60636_length_271_cov_63.177966_g52696_i0forward_frame_2 - 7e-14 52.4 7.3 7e-14 52.4 7.3 1.9 2 0 0 2 2 2 1 SRP40, C-terminal domain MYO10_CC PF16735.5 NODE_60630_length_271_cov_77.152542_g52690_i0reverse_frame_2 - 0.0028 17.7 0.5 0.0065 16.5 0.2 1.7 2 0 0 2 2 2 1 Unconventional myosin-X coiled coil domain EVC2_like PF12297.8 NODE_60630_length_271_cov_77.152542_g52690_i0forward_frame_3 - 0.087 11.5 0.3 0.083 11.6 0.3 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein PDGF_N PF04692.13 NODE_60624_length_271_cov_94.847458_g52684_i0reverse_frame_2 - 0.084 13.7 0.0 0.12 13.1 0.0 1.2 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region Phage_tail_NK PF16532.5 NODE_60622_length_271_cov_104.283898_g52682_i0forward_frame_2 - 0.0085 15.7 0.0 0.011 15.4 0.0 1.1 1 0 0 1 1 1 1 Sf6-type phage tail needle knob or tip of some Caudovirales DUF3938 PF13074.6 NODE_60619_length_271_cov_122.889831_g52679_i0reverse_frame_3 - 0.038 14.2 0.3 0.048 13.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3938) DsrD PF08679.11 NODE_60619_length_271_cov_122.889831_g52679_i0forward_frame_2 - 0.056 13.7 0.0 0.087 13.1 0.0 1.3 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) ECSIT_C PF14784.6 NODE_60614_length_271_cov_159.211864_g52674_i0forward_frame_3 - 0.15 12.4 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 C-terminal domain of the ECSIT protein FecCD PF01032.18 NODE_60611_length_271_cov_217.419492_g52671_i0reverse_frame_3 - 0.003 16.6 0.2 0.003 16.6 0.2 1.1 1 0 0 1 1 1 1 FecCD transport family TMEM117 PF15113.6 NODE_60611_length_271_cov_217.419492_g52671_i0reverse_frame_3 - 0.053 12.5 7.9 0.055 12.4 7.9 1.0 1 0 0 1 1 1 0 TMEM117 protein family RAMP4 PF06624.12 NODE_60609_length_271_cov_311.177966_g52669_i0forward_frame_3 - 0.066 13.3 0.2 0.092 12.8 0.2 1.2 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 DUF3343 PF11823.8 NODE_60608_length_271_cov_332.843220_g52668_i0reverse_frame_3 - 0.072 12.6 0.1 0.095 12.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3343) Regulator_TrmB PF11495.8 NODE_60608_length_271_cov_332.843220_g52668_i0reverse_frame_2 - 0.13 11.4 0.2 0.16 11.1 0.2 1.0 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB TAF8_C PF10406.9 NODE_60608_length_271_cov_332.843220_g52668_i0forward_frame_3 - 0.063 13.8 0.0 0.099 13.2 0.0 1.3 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term zf_ZIC PF18366.1 NODE_60608_length_271_cov_332.843220_g52668_i0forward_frame_2 - 0.072 13.2 0.0 0.18 12.0 0.0 1.7 1 0 0 1 1 1 0 Zic proteins zinc finger domain HMG_box PF00505.19 NODE_60603_length_271_cov_1575.084746_g52663_i0forward_frame_3 - 0.00011 22.6 0.7 0.00016 22.0 0.0 1.6 2 0 0 2 2 2 1 HMG (high mobility group) box DUF4020 PF13212.6 NODE_60598_length_272_cov_1.151899_g52658_i0reverse_frame_2 - 0.096 12.5 0.1 0.096 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4020) DUF1922 PF09082.10 NODE_60597_length_272_cov_1.164557_g52657_i0reverse_frame_3 - 0.16 12.3 0.1 8.5 6.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1922) DUF4598 PF15370.6 NODE_60595_length_272_cov_1.206751_g52655_i0reverse_frame_2 - 0.03 14.8 2.0 0.036 14.5 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4598) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks265.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks265.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks265.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks265.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EbsA PF17255.2 NODE_60594_length_272_cov_1.265823_g52654_i0forward_frame_3 - 0.15 12.4 4.3 0.19 12.1 4.3 1.1 1 0 0 1 1 1 0 EbsA-like protein DUF2207 PF09972.9 NODE_60594_length_272_cov_1.265823_g52654_i0forward_frame_3 - 1.2 7.8 3.0 1.3 7.7 3.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-TFIIB PF13453.6 NODE_60593_length_272_cov_1.270042_g52653_i0reverse_frame_3 - 0.06 12.7 0.0 0.085 12.2 0.0 1.2 1 0 0 1 1 1 0 Transcription factor zinc-finger DUF2258 PF10015.9 NODE_60592_length_272_cov_1.270042_g52652_i0reverse_frame_3 - 0.057 13.6 0.6 0.41 10.8 0.3 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) DUF3978 PF13123.6 NODE_60592_length_272_cov_1.270042_g52652_i0reverse_frame_2 - 0.05 13.3 1.9 0.045 13.5 1.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3978) PIG-P PF08510.12 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_3 - 1.6 8.7 7.9 0.44 10.5 1.9 2.0 2 0 0 2 2 2 0 PIG-P DUF2973 PF11189.8 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_3 - 3.1 8.0 5.0 0.43 10.7 0.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2973) Myticin-prepro PF10690.9 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_2 - 0.13 12.5 2.3 0.21 11.9 2.3 1.3 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel TRP PF06011.12 NODE_60588_length_272_cov_1.358650_g52648_i0reverse_frame_3 - 0.0064 15.3 12.7 0.0072 15.1 12.7 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Glyco_tranf_2_2 PF10111.9 NODE_60588_length_272_cov_1.358650_g52648_i0forward_frame_2 - 0.083 12.4 0.4 0.092 12.2 0.4 1.0 1 0 0 1 1 1 0 Glycosyltransferase like family 2 PFL-like PF02901.15 NODE_60579_length_272_cov_1.518987_g52639_i0forward_frame_2 - 0.052 12.2 0.0 0.052 12.2 0.0 1.1 1 0 0 1 1 1 0 Pyruvate formate lyase-like Retrotran_gag_2 PF14223.6 NODE_60578_length_272_cov_1.523207_g52638_i0reverse_frame_2 - 0.066 12.9 0.1 0.072 12.8 0.1 1.2 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type CRISPR_Cas9_WED PF18061.1 NODE_60578_length_272_cov_1.523207_g52638_i0reverse_frame_2 - 0.18 11.9 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 CRISPR-Cas9 WED domain WND PF07861.11 NODE_60576_length_272_cov_1.594937_g52636_i0reverse_frame_3 - 0.0069 15.8 0.1 0.0077 15.7 0.1 1.1 1 0 0 1 1 1 1 WisP family N-Terminal Region DUF4046 PF13255.6 NODE_60576_length_272_cov_1.594937_g52636_i0forward_frame_3 - 0.19 12.3 3.4 0.29 11.7 3.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4046) ToxN_toxin PF13958.6 NODE_60574_length_272_cov_1.603376_g52634_i0reverse_frame_3 - 0.069 13.4 0.1 0.095 12.9 0.1 1.3 1 1 0 1 1 1 0 Toxin ToxN, type III toxin-antitoxin system Myco_arth_vir_N PF09610.10 NODE_60574_length_272_cov_1.603376_g52634_i0reverse_frame_2 - 5.7 7.1 7.0 9.1 6.5 7.0 1.3 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) DUF4574 PF15141.6 NODE_60572_length_272_cov_1.607595_g52632_i0reverse_frame_3 - 0.091 12.7 5.1 0.13 12.2 5.1 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 DUF4348 PF14254.6 NODE_60571_length_272_cov_1.637131_g52631_i0reverse_frame_2 - 0.035 13.5 1.9 0.045 13.1 0.9 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4348) DUF5381 PF17353.2 NODE_60570_length_272_cov_1.641350_g52630_i0forward_frame_3 - 0.1 12.3 0.3 0.12 12.1 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Lact-deh-memb PF09330.11 NODE_60569_length_272_cov_1.645570_g52629_i0forward_frame_3 - 0.021 14.2 0.1 0.026 13.9 0.1 1.0 1 0 0 1 1 1 0 D-lactate dehydrogenase, membrane binding Rubredoxin PF00301.20 NODE_60566_length_272_cov_1.683544_g52626_i0forward_frame_3 - 0.059 13.4 0.3 0.13 12.3 0.3 1.6 1 0 0 1 1 1 0 Rubredoxin RB_A PF01858.17 NODE_60563_length_272_cov_1.738397_g52623_i0reverse_frame_2 - 0.029 14.2 1.0 0.044 13.6 1.0 1.2 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain DUF1542 PF07564.11 NODE_60560_length_272_cov_1.805907_g52620_i0reverse_frame_2 - 0.0088 16.1 1.8 0.012 15.7 1.8 1.2 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1542) DDE_Tnp_IS1 PF03400.13 NODE_60560_length_272_cov_1.805907_g52620_i0reverse_frame_2 - 0.16 12.3 1.9 0.19 12.1 1.9 1.2 1 1 0 1 1 1 0 IS1 transposase Myco_arth_vir_N PF09610.10 NODE_60560_length_272_cov_1.805907_g52620_i0forward_frame_3 - 0.15 12.2 1.2 0.23 11.6 1.2 1.3 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) AAA_lid_7 PF17867.1 NODE_60559_length_272_cov_1.827004_g52619_i0reverse_frame_3 - 0.0045 17.2 0.0 0.0056 16.9 0.0 1.1 1 0 0 1 1 1 1 Midasin AAA lid domain WXG100 PF06013.12 NODE_60559_length_272_cov_1.827004_g52619_i0reverse_frame_3 - 0.01 16.0 0.2 0.013 15.7 0.2 1.1 1 0 0 1 1 1 0 Proteins of 100 residues with WXG DUF2120 PF09893.9 NODE_60559_length_272_cov_1.827004_g52619_i0reverse_frame_3 - 0.045 13.8 1.0 0.95 9.6 0.2 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) Thermopsin PF05317.11 NODE_60558_length_272_cov_1.843882_g52618_i0forward_frame_2 - 0.0051 16.3 0.5 0.0055 16.2 0.5 1.0 1 0 0 1 1 1 1 Thermopsin Nucleos_tra2_C PF07662.13 NODE_60556_length_272_cov_1.877637_g52616_i0forward_frame_2 - 6.2e-08 32.7 0.1 6.2e-08 32.7 0.1 1.4 2 0 0 2 2 2 1 Na+ dependent nucleoside transporter C-terminus Collectrin PF16959.5 NODE_60555_length_272_cov_1.886076_g52615_i0forward_frame_3 - 0.059 13.1 0.1 0.064 13.0 0.1 1.1 1 0 0 1 1 1 0 Renal amino acid transporter Ribosomal_L31 PF01197.18 NODE_60554_length_272_cov_1.940928_g52614_i0forward_frame_2 - 0.06 13.6 0.0 0.099 12.9 0.0 1.4 1 1 0 1 1 1 0 Ribosomal protein L31 vMSA PF00695.19 NODE_60553_length_272_cov_1.940928_g52613_i0forward_frame_3 - 0.018 14.2 1.2 0.021 13.9 1.2 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Ion_trans PF00520.31 NODE_60551_length_272_cov_1.970464_g52611_i0reverse_frame_3 - 0.14 11.4 0.1 0.15 11.3 0.1 1.1 1 0 0 1 1 1 0 Ion transport protein Opy2 PF09463.10 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 0.021 15.1 23.2 0.64 10.4 4.0 3.8 3 1 1 4 4 4 0 Opy2 protein Ephrin_rec_like PF07699.13 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 0.038 13.8 23.8 1.9 8.3 11.9 3.9 1 1 2 3 3 3 0 Putative ephrin-receptor like Dickkopf_N PF04706.12 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 0.18 12.3 15.5 12 6.5 1.8 4.0 1 1 2 3 3 3 0 Dickkopf N-terminal cysteine-rich region zf-MYND PF01753.18 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 0.83 9.8 20.3 1.1 9.3 4.3 3.3 2 2 0 2 2 2 0 MYND finger Lustrin_cystein PF14625.6 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 1.5 9.2 27.7 0.22 11.9 1.6 4.6 1 1 4 5 5 5 0 Lustrin, cysteine-rich repeated domain Nif11 PF07862.11 NODE_60546_length_272_cov_2.113924_g52606_i0reverse_frame_2 - 0.15 12.4 0.1 0.24 11.7 0.1 1.3 1 0 0 1 1 1 0 Nif11 domain DUF308 PF03729.13 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 1.8e-12 47.4 15.3 2.1e-12 47.2 15.3 1.1 1 0 0 1 1 1 1 Short repeat of unknown function (DUF308) DUF4386 PF14329.6 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.0062 16.4 5.3 0.0075 16.2 5.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4386) Tmemb_170 PF10190.9 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.015 15.7 3.6 1 9.8 0.5 2.1 1 1 1 2 2 2 0 Putative transmembrane protein 170 DUF3792 PF12670.7 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.029 14.5 7.6 0.035 14.3 7.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) SirB PF04247.12 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.1 12.7 5.2 0.38 10.9 4.8 1.8 1 1 1 2 2 2 0 Invasion gene expression up-regulator, SirB DUF3040 PF11239.8 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.1 12.9 7.3 4.9 7.5 7.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3040) Oxidored_q2 PF00420.24 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.17 11.5 6.0 0.22 11.2 6.0 1.3 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YfhO PF09586.10 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.18 10.0 3.0 0.21 9.8 3.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Peptidase_M48_N PF16491.5 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.27 11.1 3.3 0.16 11.9 1.4 1.5 1 1 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices LptF_LptG PF03739.14 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.65 8.8 7.4 0.75 8.6 7.4 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG TMEM100 PF16311.5 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.93 9.1 2.9 1.3 8.6 2.9 1.2 1 0 0 1 1 1 0 Transmembrane protein 100 DUF3784 PF12650.7 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 2.1 8.6 11.5 0.33 11.2 3.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3784) DUF3810 PF12725.7 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 3.2 7.0 6.2 3.7 6.8 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) COPI_assoc PF08507.10 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 3.2 7.8 13.6 4.3 7.4 2.0 2.4 1 1 1 2 2 2 0 COPI associated protein Phage_holin_3_6 PF07332.11 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 7.4 6.6 11.1 61 3.7 11.1 1.9 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Phage_holin_2_3 PF16080.5 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 7.8 6.4 6.4 0.77 9.6 2.1 1.7 2 0 0 2 2 2 0 Bacteriophage holin family HP1 DUF4131 PF13567.6 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 8.8 6.0 11.6 1e+02 2.5 0.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) DUF2721 PF11026.8 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 9.8 6.1 11.8 7.4 6.5 4.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) DUF1564 PF07600.11 NODE_60543_length_272_cov_2.126582_g52603_i0forward_frame_3 - 0.017 14.8 0.7 0.02 14.6 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) LEA_6 PF10714.9 NODE_60543_length_272_cov_2.126582_g52603_i0forward_frame_2 - 0.043 13.9 0.2 0.06 13.4 0.2 1.2 1 0 0 1 1 1 0 Late embryogenesis abundant protein 18 Hist_deacetyl PF00850.19 NODE_60529_length_272_cov_2.898734_g52589_i0forward_frame_3 - 9.2e-25 87.7 0.1 9.7e-25 87.7 0.1 1.0 1 0 0 1 1 1 1 Histone deacetylase domain PLDc_2 PF13091.6 NODE_60527_length_272_cov_3.160338_g52587_i0forward_frame_2 - 0.021 14.7 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 PLD-like domain TK PF00265.18 NODE_60525_length_272_cov_3.392405_g52585_i0forward_frame_2 - 6.9e-20 71.6 0.0 8e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 Thymidine kinase zf-Di19 PF05605.12 NODE_60522_length_272_cov_3.632911_g52582_i0forward_frame_2 - 0.17 12.2 3.7 0.23 11.8 3.7 1.3 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding ET PF01684.16 NODE_60516_length_272_cov_9.637131_g52576_i0forward_frame_3 - 0.075 13.4 1.1 0.11 12.8 1.1 1.3 1 0 0 1 1 1 0 ET module FAM209 PF15206.6 NODE_60514_length_272_cov_27.008439_g52574_i0forward_frame_2 - 0.012 15.4 8.6 0.015 15.1 8.6 1.1 1 0 0 1 1 1 0 FAM209 family DUF4770 PF15994.5 NODE_60513_length_272_cov_30.561181_g52573_i0forward_frame_2 - 0.0099 16.1 6.6 0.012 15.9 6.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4770) PPL5 PF18168.1 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 4.1 6.6 8.3 4.8 6.4 8.3 1.0 1 0 0 1 1 1 0 Prim-pol family 5 Connexin PF00029.19 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 4.2 7.1 8.5 4.9 6.8 8.5 1.1 1 0 0 1 1 1 0 Connexin Zip PF02535.22 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 4.7 6.3 5.4 5.3 6.2 5.4 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Sec62 PF03839.16 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 7.4 6.0 11.1 8.1 5.9 11.1 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 RR_TM4-6 PF06459.12 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 8.4 6.1 14.2 9.3 6.0 14.2 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TAF4 PF05236.14 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 8.6 6.0 15.8 11 5.7 15.8 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family ANAPC_CDC26 PF10471.9 NODE_60510_length_272_cov_40.257384_g52570_i0reverse_frame_3 - 0.83 10.5 4.1 1.4 9.8 4.1 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex APC subunit CDC26 Calpain_inhib PF00748.19 NODE_60505_length_272_cov_43.928270_g52565_i0reverse_frame_3 - 0.085 13.4 2.5 0.11 13.1 2.5 1.1 1 0 0 1 1 1 0 Calpain inhibitor UPF1_Zn_bind PF09416.10 NODE_60502_length_272_cov_46.755274_g52562_i0forward_frame_2 - 0.0046 16.9 0.5 0.0058 16.6 0.5 1.2 1 0 0 1 1 1 1 RNA helicase (UPF2 interacting domain) Zf_RING PF16744.5 NODE_60502_length_272_cov_46.755274_g52562_i0forward_frame_2 - 0.055 13.6 0.1 0.12 12.5 0.1 1.5 2 0 0 2 2 2 0 KIAA1045 RING finger Glyco_tran_WbsX PF14307.6 NODE_60497_length_272_cov_52.565401_g52557_i0forward_frame_2 - 0.069 12.6 0.0 0.079 12.4 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase WbsX O-ag_pol_Wzy PF14296.6 NODE_60495_length_272_cov_53.945148_g52555_i0forward_frame_2 - 0.0045 15.7 0.2 0.0051 15.5 0.2 1.1 1 0 0 1 1 1 1 O-antigen polysaccharide polymerase Wzy CHASE PF03924.13 NODE_60495_length_272_cov_53.945148_g52555_i0forward_frame_2 - 0.14 12.0 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 CHASE domain Glyco_hydro_4 PF02056.16 NODE_60494_length_272_cov_54.198312_g52554_i0reverse_frame_2 - 0.15 11.6 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase MORN PF02493.20 NODE_60493_length_272_cov_59.426160_g52553_i0reverse_frame_2 - 0.017 15.0 2.5 0.84 9.7 0.7 2.6 2 1 0 2 2 2 0 MORN repeat NDUF_B6 PF09782.9 NODE_60493_length_272_cov_59.426160_g52553_i0forward_frame_2 - 0.25 11.5 0.2 0.32 11.1 0.2 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit DUF4607 PF15380.6 NODE_60492_length_272_cov_59.472574_g52552_i0reverse_frame_3 - 0.12 11.9 0.2 0.16 11.4 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4607) HNH_4 PF13395.6 NODE_60490_length_272_cov_59.915612_g52550_i0reverse_frame_2 - 0.075 13.0 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 HNH endonuclease ATG16 PF08614.11 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.0005 20.4 17.9 0.00056 20.2 17.9 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) SpecificRecomb PF10136.9 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.16 10.2 4.7 0.19 10.0 4.7 1.0 1 0 0 1 1 1 0 Site-specific recombinase TSC22 PF01166.18 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.18 12.1 6.4 0.89 9.9 1.4 2.1 1 1 1 2 2 2 0 TSC-22/dip/bun family DivIC PF04977.15 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.23 11.2 15.4 0.28 11.0 0.7 2.1 1 1 1 2 2 2 0 Septum formation initiator Spc29 PF17082.5 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.67 9.8 7.9 0.059 13.2 1.6 1.7 1 1 1 2 2 2 0 Spindle Pole Component 29 TMF_TATA_bd PF12325.8 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.7 10.1 15.3 1.1 9.5 15.3 1.4 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DUF2203 PF09969.9 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 2.7 8.7 8.8 3.4 8.4 8.8 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) CLN6 PF15156.6 NODE_60488_length_272_cov_62.611814_g52548_i0reverse_frame_3 - 0.28 10.4 0.0 0.33 10.2 0.0 1.1 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 6 Conotoxin_I2 PF17557.2 NODE_60488_length_272_cov_62.611814_g52548_i0forward_frame_3 - 0.029 14.5 7.1 0.074 13.2 7.1 1.8 1 1 0 1 1 1 0 I2-superfamily conotoxins CRM1_repeat_2 PF18784.1 NODE_60484_length_272_cov_71.388186_g52544_i0reverse_frame_3 - 0.0019 17.8 0.0 0.003 17.2 0.0 1.3 1 0 0 1 1 1 1 CRM1 / Exportin repeat 2 CompInhib_SCIN PF11546.8 NODE_60484_length_272_cov_71.388186_g52544_i0reverse_frame_3 - 0.006 16.6 0.1 0.007 16.4 0.1 1.1 1 0 0 1 1 1 1 Staphylococcal complement inhibitor SCIN DUF4600 PF15372.6 NODE_60484_length_272_cov_71.388186_g52544_i0reverse_frame_3 - 0.043 14.2 0.1 0.048 14.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4600) FNIP PF05725.12 NODE_60476_length_272_cov_89.746835_g52536_i0reverse_frame_2 - 7.1e-09 35.7 0.7 1.2e-08 34.9 0.7 1.4 1 1 0 1 1 1 1 FNIP Repeat Pyridox_oxase_2 PF12766.7 NODE_60471_length_272_cov_103.367089_g52531_i0reverse_frame_2 - 0.074 13.7 0.0 0.085 13.5 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF3606 PF12244.8 NODE_60469_length_272_cov_113.784810_g52529_i0forward_frame_2 - 0.072 13.0 0.2 0.13 12.3 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3606) SF3A3 PF16837.5 NODE_60468_length_272_cov_115.894515_g52528_i0reverse_frame_2 - 0.028 14.9 5.7 0.062 13.8 5.7 1.5 1 1 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 gerPA PF10676.9 NODE_60463_length_272_cov_142.679325_g52523_i0reverse_frame_2 - 0.12 12.6 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Spore germination protein gerPA/gerPF Calpain_III PF01067.22 NODE_60460_length_272_cov_186.202532_g52520_i0reverse_frame_2 - 0.0067 16.7 0.1 0.015 15.6 0.0 1.6 2 0 0 2 2 2 1 Calpain large subunit, domain III Queuosine_synth PF02547.15 NODE_60459_length_272_cov_237.506329_g52519_i0reverse_frame_3 - 0.0039 16.4 0.2 0.0048 16.1 0.2 1.2 1 0 0 1 1 1 1 Queuosine biosynthesis protein FANCA_interact PF15751.5 NODE_60457_length_272_cov_421.489451_g52517_i0reverse_frame_3 - 0.029 14.9 0.4 0.11 13.0 0.4 1.7 1 1 1 2 2 2 0 FAAP20 FANCA interaction domain Pkinase_C PF00433.24 NODE_60456_length_272_cov_577.320675_g52516_i0reverse_frame_3 - 2.8e-05 24.7 0.7 4.1e-05 24.2 0.7 1.4 1 0 0 1 1 1 1 Protein kinase C terminal domain Chloroa_b-bind PF00504.21 NODE_60454_length_272_cov_2240.303797_g52514_i0reverse_frame_3 - 1.3e-08 35.6 0.2 2.1e-08 34.9 0.2 1.5 1 1 0 1 1 1 1 Chlorophyll A-B binding protein AXE1 PF05448.12 NODE_60454_length_272_cov_2240.303797_g52514_i0forward_frame_2 - 0.11 11.1 0.1 0.14 10.8 0.1 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Cytidylate_kin2 PF13189.6 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 0.15 12.2 2.2 16 5.6 3.3 2.0 2 0 0 2 2 2 0 Cytidylate kinase-like family SLY PF12485.8 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 0.39 11.4 7.8 0.48 11.1 7.8 1.0 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein CDC45 PF02724.14 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 0.54 8.5 12.8 0.6 8.3 12.8 1.0 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 0.69 8.0 17.9 0.77 7.8 17.9 1.0 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 1.3 7.2 15.5 1.4 7.1 15.5 1.0 1 0 0 1 1 1 0 Nop14-like family Sporozoite_P67 PF05642.11 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 1.7 6.6 7.8 1.8 6.6 7.8 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Pox_RNA_Pol_19 PF05320.12 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 1.8 8.6 8.2 2.2 8.3 8.2 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit DUF4637 PF15470.6 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 1.9 8.2 11.2 2.1 8.1 11.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF2457 PF10446.9 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 7.4 5.6 18.2 8.4 5.4 18.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Pes-10 PF07149.11 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 8.2 5.4 13.5 9 5.2 13.5 1.0 1 0 0 1 1 1 0 Pes-10 DUF842 PF05811.13 NODE_60450_length_273_cov_0.894958_g52510_i0reverse_frame_2 - 0.08 12.6 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) CHU_C PF13585.6 NODE_60450_length_273_cov_0.894958_g52510_i0forward_frame_2 - 0.049 13.7 0.1 0.065 13.3 0.1 1.3 1 0 0 1 1 1 0 C-terminal domain of CHU protein family DS PF01916.17 NODE_60449_length_273_cov_0.966387_g52509_i0reverse_frame_2 - 0.045 13.0 0.0 0.048 12.9 0.0 1.0 1 0 0 1 1 1 0 Deoxyhypusine synthase Ion_trans PF00520.31 NODE_60448_length_273_cov_1.004202_g52508_i0reverse_frame_2 - 5.6 6.1 14.8 37 3.4 13.4 2.0 1 1 1 2 2 2 0 Ion transport protein DUF2830 PF11125.8 NODE_60448_length_273_cov_1.004202_g52508_i0reverse_frame_2 - 6.7 6.8 7.8 12 6.0 1.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2830) eIF3_N PF09440.10 NODE_60448_length_273_cov_1.004202_g52508_i0forward_frame_2 - 0.069 13.6 0.1 0.077 13.4 0.1 1.1 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain Anticodon_1 PF08264.13 NODE_60445_length_273_cov_1.050420_g52505_i0forward_frame_3 - 0.14 12.1 0.3 0.19 11.7 0.3 1.1 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA DUF3136 PF11334.8 NODE_60438_length_273_cov_1.289916_g52498_i0forward_frame_3 - 0.093 12.5 0.4 0.13 12.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) DUF5380 PF17351.2 NODE_60437_length_273_cov_1.302521_g52497_i0reverse_frame_2 - 0.096 12.6 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5380) C2 PF00168.30 NODE_60436_length_273_cov_1.319328_g52496_i0forward_frame_3 - 0.0033 17.7 0.2 0.0037 17.5 0.2 1.2 1 0 0 1 1 1 1 C2 domain CEP76-C2 PF15627.6 NODE_60436_length_273_cov_1.319328_g52496_i0forward_frame_3 - 0.083 12.5 0.1 0.12 11.9 0.1 1.3 1 1 0 1 1 1 0 CEP76 C2 domain BTB_2 PF02214.22 NODE_60434_length_273_cov_1.336134_g52494_i0reverse_frame_3 - 0.074 13.4 0.5 0.087 13.2 0.5 1.1 1 0 0 1 1 1 0 BTB/POZ domain NT-C2 PF10358.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_3 - 0.017 14.9 0.4 0.018 14.7 0.4 1.1 1 0 0 1 1 1 0 N-terminal C2 in EEIG1 and EHBP1 proteins DUF3437 PF11919.8 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_3 - 0.044 13.7 0.1 0.052 13.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) UPF0242 PF06785.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 4.4e-05 23.7 6.6 5.4e-05 23.4 6.6 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus TMF_DNA_bd PF12329.8 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 4.8e-05 23.3 10.2 4.8e-05 23.3 10.2 1.4 1 1 0 1 1 1 1 TATA element modulatory factor 1 DNA binding SlyX PF04102.12 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00011 22.7 6.0 0.039 14.6 0.5 2.1 1 1 1 2 2 2 2 SlyX FlaC_arch PF05377.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00024 21.4 4.4 0.01 16.2 0.9 2.2 1 1 1 2 2 2 2 Flagella accessory protein C (FlaC) TACC_C PF05010.14 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00042 20.2 1.8 0.0005 19.9 1.8 1.0 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HemX PF04375.14 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00047 19.5 4.0 0.00056 19.3 4.0 1.0 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase JIP_LZII PF16471.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00087 19.4 4.4 0.15 12.3 0.7 2.2 1 1 1 2 2 2 2 JNK-interacting protein leucine zipper II HALZ PF02183.18 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0011 19.2 1.4 0.0017 18.6 0.2 1.9 2 0 0 2 2 1 1 Homeobox associated leucine zipper ATG16 PF08614.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0014 18.9 5.8 0.0019 18.5 5.8 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) HOOK PF05622.12 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0016 16.7 4.9 0.0018 16.6 4.9 1.0 1 0 0 1 1 1 1 HOOK protein KLRAQ PF10205.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0022 18.2 5.9 0.0052 17.0 5.1 1.7 1 1 0 1 1 1 1 Predicted coiled-coil domain-containing protein CENP-F_leu_zip PF10473.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0024 17.9 6.6 0.003 17.6 6.6 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ZapB PF06005.12 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0036 17.7 5.6 0.0075 16.7 5.5 1.6 1 1 0 1 1 1 1 Cell division protein ZapB TTKRSYEDQ PF10212.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0037 16.3 2.4 0.0038 16.3 2.4 1.1 1 0 0 1 1 1 1 Predicted coiled-coil domain-containing protein DivIC PF04977.15 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0042 16.8 7.8 0.018 14.8 3.4 2.2 1 1 1 2 2 2 1 Septum formation initiator Jnk-SapK_ap_N PF09744.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.005 17.1 3.8 0.0057 16.9 3.8 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Cob_adeno_trans PF01923.18 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0052 16.9 0.8 0.0059 16.8 0.8 1.1 1 0 0 1 1 1 1 Cobalamin adenosyltransferase DUF724 PF05266.14 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.007 16.2 2.7 0.008 16.0 2.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF724) HMMR_C PF15908.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0079 16.5 2.0 0.01 16.1 2.0 1.1 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor C-terminal Spc7 PF08317.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0086 15.0 6.8 0.037 12.9 6.8 1.8 1 1 0 1 1 1 1 Spc7 kinetochore protein Lebercilin PF15619.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.012 15.3 7.5 0.017 14.8 7.5 1.2 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease Flu_NS2 PF00601.19 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.016 15.5 0.7 0.042 14.1 0.4 1.7 1 1 1 2 2 2 0 Influenza non-structural protein (NS2) bZIP_1 PF00170.21 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.018 15.1 2.6 0.097 12.8 0.1 2.1 2 0 0 2 2 2 0 bZIP transcription factor CLZ PF16526.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.021 15.2 5.4 0.6 10.5 1.8 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Fez1 PF06818.15 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.025 15.0 4.4 0.028 14.9 4.4 1.0 1 0 0 1 1 1 0 Fez1 K-box PF01486.17 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.026 14.7 5.6 0.15 12.2 0.3 2.1 1 1 1 2 2 2 0 K-box region Prefoldin_2 PF01920.20 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.03 14.3 6.9 0.073 13.0 1.0 2.1 1 1 1 2 2 2 0 Prefoldin subunit JAKMIP_CC3 PF16034.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.031 14.2 5.9 0.035 14.0 5.9 1.1 1 0 0 1 1 1 0 JAKMIP CC3 domain FlxA PF14282.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.042 13.9 11.5 0.28 11.2 2.2 2.1 1 1 1 2 2 2 0 FlxA-like protein CtIP_N PF10482.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.047 13.7 5.5 0.081 13.0 2.5 2.0 1 1 1 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain Csm1_N PF18504.1 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.05 13.9 6.8 0.46 10.9 1.2 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain ABC_tran_CTD PF16326.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.059 13.6 3.8 0.6 10.4 3.8 2.1 1 1 0 1 1 1 0 ABC transporter C-terminal domain Fungal_TACC PF12709.7 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.088 13.3 5.1 0.17 12.4 0.6 2.1 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins PCRF PF03462.18 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.088 12.7 3.7 0.1 12.4 3.7 1.0 1 0 0 1 1 1 0 PCRF domain Val_tRNA-synt_C PF10458.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.093 13.0 2.3 1.2 9.4 0.1 2.3 1 1 1 2 2 2 0 Valyl tRNA synthetase tRNA binding arm DUF16 PF01519.16 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.095 13.2 4.7 0.19 12.2 4.6 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 TolA_bind_tri PF16331.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.1 12.7 7.3 0.28 11.3 7.3 1.7 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF4407 PF14362.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.13 11.6 3.3 0.21 10.9 3.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Nas2_N PF18265.1 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.13 12.2 4.6 4.3 7.3 0.3 2.2 2 0 0 2 2 2 0 Nas2 N_terminal domain Cep57_CLD_2 PF14197.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.13 12.4 5.6 0.28 11.3 0.6 2.1 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 BST2 PF16716.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.16 12.6 5.4 3.2 8.4 0.6 2.0 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF3450 PF11932.8 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.19 11.0 4.6 0.23 10.7 4.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF948 PF06103.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.2 11.9 1.2 5.4 7.3 0.3 2.1 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF4200 PF13863.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.21 12.0 7.1 1.3 9.5 2.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF1640 PF07798.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.21 11.6 6.4 0.47 10.5 6.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) DUF5094 PF17015.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.27 11.3 4.3 0.33 11.0 4.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) FAM76 PF16046.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.28 10.5 5.8 0.36 10.1 5.8 1.3 1 0 0 1 1 1 0 FAM76 protein Macoilin PF09726.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.33 9.5 6.1 0.39 9.2 6.1 1.0 1 0 0 1 1 1 0 Macoilin family Prominin PF05478.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.38 8.6 3.9 0.4 8.6 3.9 1.0 1 0 0 1 1 1 0 Prominin DUF1664 PF07889.12 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.38 10.8 4.7 7.9 6.5 0.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.58 10.6 4.6 7.7 7.0 4.6 2.0 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) XLF PF09302.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.83 9.8 9.0 4 7.6 2.4 2.5 1 1 2 3 3 3 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component FliT PF05400.13 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.91 10.4 8.5 0.68 10.8 2.3 2.0 1 1 1 2 2 2 0 Flagellar protein FliT Atg14 PF10186.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 1.3 8.0 8.4 1.4 7.9 8.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 EMP24_GP25L PF01105.24 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 1.4 8.8 4.4 1 9.3 1.4 1.9 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD Toxin_18 PF08087.11 NODE_60431_length_273_cov_1.378151_g52491_i0reverse_frame_3 - 0.0088 16.0 11.0 0.019 15.0 1.9 2.5 2 0 0 2 2 2 2 Conotoxin O-superfamily Ydr279_N PF17745.1 NODE_60431_length_273_cov_1.378151_g52491_i0forward_frame_2 - 0.1 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Ydr279p protein triple barrel domain DUF2201_N PF13203.6 NODE_60428_length_273_cov_1.436975_g52488_i0forward_frame_3 - 0.13 11.8 0.1 0.14 11.7 0.1 1.0 1 0 0 1 1 1 0 Putative metallopeptidase domain Phage_FRD3 PF05798.11 NODE_60427_length_273_cov_1.453782_g52487_i0forward_frame_2 - 0.071 13.4 0.0 0.094 13.0 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage FRD3 protein DUF3823 PF12866.7 NODE_60426_length_273_cov_1.470588_g52486_i0forward_frame_2 - 0.025 14.9 0.0 0.027 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3823) N-terminal domain DNA_topoisoIV PF00521.20 NODE_60424_length_273_cov_1.504202_g52484_i0forward_frame_3 - 8.1e-20 71.1 0.3 8.6e-20 71.0 0.3 1.0 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A 7tm_7 PF08395.12 NODE_60423_length_273_cov_1.512605_g52483_i0reverse_frame_2 - 0.031 13.5 0.1 0.037 13.2 0.1 1.0 1 0 0 1 1 1 0 7tm Chemosensory receptor DUF908 PF06012.12 NODE_60422_length_273_cov_1.575630_g52482_i0reverse_frame_3 - 0.1 12.0 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) Subtilosin_A PF11420.8 NODE_60421_length_273_cov_1.575630_g52481_i0reverse_frame_3 - 0.048 13.6 0.6 0.074 13.0 0.6 1.3 1 0 0 1 1 1 0 Bacteriocin subtilosin A PDEase_II PF02112.15 NODE_60420_length_273_cov_1.584034_g52480_i0reverse_frame_2 - 0.083 12.0 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II DUF5076 PF16826.5 NODE_60418_length_273_cov_1.634454_g52478_i0reverse_frame_2 - 0.074 13.0 0.0 0.24 11.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5076) Auxin_inducible PF02519.14 NODE_60418_length_273_cov_1.634454_g52478_i0forward_frame_3 - 0.0071 16.5 0.1 0.0088 16.2 0.1 1.1 1 0 0 1 1 1 1 Auxin responsive protein Exo_endo_phos PF03372.23 NODE_60418_length_273_cov_1.634454_g52478_i0forward_frame_2 - 0.019 14.5 0.0 0.022 14.3 0.0 1.0 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family EF-hand_7 PF13499.6 NODE_60417_length_273_cov_1.668067_g52477_i0forward_frame_2 - 0.00072 20.0 0.2 0.0013 19.2 0.1 1.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_60417_length_273_cov_1.668067_g52477_i0forward_frame_2 - 0.0031 16.9 0.0 0.0056 16.1 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 NODE_60417_length_273_cov_1.668067_g52477_i0forward_frame_2 - 0.042 13.7 0.0 0.064 13.1 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair LepB_GAP_C PF18227.1 NODE_60411_length_273_cov_1.710084_g52471_i0reverse_frame_2 - 0.0024 18.4 0.0 0.0035 17.8 0.0 1.2 1 0 0 1 1 1 1 LepB GAP domain C-terminal subdomain cNMP_binding PF00027.29 NODE_60410_length_273_cov_1.714286_g52470_i0forward_frame_2 - 0.13 12.4 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain HSBP1 PF06825.12 NODE_60410_length_273_cov_1.714286_g52470_i0forward_frame_2 - 0.14 12.1 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Heat shock factor binding protein 1 SirB PF04247.12 NODE_60409_length_273_cov_1.752101_g52469_i0reverse_frame_3 - 0.019 15.1 1.1 0.022 14.9 1.1 1.0 1 0 0 1 1 1 0 Invasion gene expression up-regulator, SirB DUF5613 PF18467.1 NODE_60399_length_273_cov_1.873950_g52459_i0forward_frame_3 - 0.0089 16.4 0.5 0.019 15.3 0.2 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF5613) GTP_EFTU_D2 PF03144.25 NODE_60394_length_273_cov_1.983193_g52454_i0forward_frame_2 - 0.0099 16.2 0.7 0.014 15.8 0.7 1.2 1 0 0 1 1 1 1 Elongation factor Tu domain 2 Corazonin PF17308.2 NODE_60392_length_273_cov_2.071429_g52452_i0reverse_frame_2 - 0.046 14.1 0.0 0.049 14.0 0.0 1.1 1 0 0 1 1 1 0 Pro-corazonin OST_P2 PF18235.1 NODE_60392_length_273_cov_2.071429_g52452_i0forward_frame_2 - 0.0058 16.6 0.3 0.007 16.3 0.3 1.1 1 0 0 1 1 1 1 Oligosaccharyltransferase Peripheral 2 domain Sugar_tr PF00083.24 NODE_60390_length_273_cov_2.117647_g52450_i0reverse_frame_2 - 0.00071 18.6 1.6 0.0028 16.6 1.0 1.8 1 1 1 2 2 2 2 Sugar (and other) transporter Fijivirus_P9-2 PF06837.11 NODE_60390_length_273_cov_2.117647_g52450_i0reverse_frame_2 - 0.03 13.8 4.5 0.033 13.7 4.5 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein Lamprin PF06403.11 NODE_60389_length_273_cov_2.130252_g52449_i0forward_frame_2 - 0.072 13.1 1.6 0.08 12.9 1.6 1.2 1 0 0 1 1 1 0 Lamprin Cytochrome_C554 PF13435.6 NODE_60388_length_273_cov_2.147059_g52448_i0reverse_frame_2 - 0.76 10.7 10.1 1.2 10.1 10.1 1.3 1 0 0 1 1 1 0 Cytochrome c554 and c-prime FAM176 PF14851.6 NODE_60388_length_273_cov_2.147059_g52448_i0forward_frame_3 - 5.8 6.6 10.7 7.2 6.3 4.7 2.1 1 1 1 2 2 2 0 FAM176 family Ribosomal_L35Ae PF01247.18 NODE_60385_length_273_cov_2.378151_g52445_i0reverse_frame_3 - 0.13 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L35Ae SwrA PF17423.2 NODE_60383_length_273_cov_2.407563_g52443_i0forward_frame_3 - 0.0019 18.1 0.3 0.0022 18.0 0.3 1.2 1 0 0 1 1 1 1 Swarming motility protein DUF1359 PF07097.11 NODE_60382_length_273_cov_2.487395_g52442_i0forward_frame_3 - 0.066 13.5 0.2 0.088 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1359) Fer4_4 PF12800.7 NODE_60377_length_273_cov_2.651261_g52437_i0forward_frame_2 - 3.1 8.5 6.4 16 6.3 6.5 2.2 1 1 0 1 1 1 0 4Fe-4S binding domain TetR_C_8 PF14278.6 NODE_60376_length_273_cov_2.651261_g52436_i0reverse_frame_2 - 0.0099 16.0 0.7 0.012 15.7 0.7 1.1 1 0 0 1 1 1 1 Transcriptional regulator C-terminal region Fuseless PF15993.5 NODE_60373_length_273_cov_2.878151_g52433_i0reverse_frame_2 - 0.019 14.2 0.2 0.021 14.0 0.2 1.1 1 0 0 1 1 1 0 Fuseless ATP-synt_F6 PF05511.11 NODE_60373_length_273_cov_2.878151_g52433_i0forward_frame_2 - 0.15 12.5 0.1 0.4 11.1 0.0 1.7 1 1 1 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 Herpes_TK PF00693.18 NODE_60371_length_273_cov_3.126050_g52431_i0reverse_frame_3 - 0.098 11.9 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 Thymidine kinase from herpesvirus TMEM213 PF15192.6 NODE_60368_length_273_cov_3.315126_g52428_i0reverse_frame_3 - 0.12 12.4 1.6 0.13 12.2 0.7 1.6 1 1 0 1 1 1 0 TMEM213 family DUF3341 PF11821.8 NODE_60367_length_273_cov_3.403361_g52427_i0forward_frame_3 - 0.016 14.9 0.1 0.02 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) VirB3 PF05101.13 NODE_60365_length_273_cov_4.058824_g52425_i0reverse_frame_3 - 0.055 13.7 1.9 0.066 13.5 1.5 1.4 1 1 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein FA_desaturase PF00487.24 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.021 14.7 2.8 0.023 14.6 2.8 1.0 1 0 0 1 1 1 0 Fatty acid desaturase Wzy_C PF04932.15 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.17 11.5 3.8 0.22 11.2 3.8 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF2207 PF09972.9 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.26 10.0 2.4 0.28 9.9 2.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Glyco_trans_2_3 PF13632.6 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.46 10.4 6.1 0.51 10.2 6.1 1.0 1 0 0 1 1 1 0 Glycosyl transferase family group 2 DUF4191 PF13829.6 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.56 9.5 3.2 0.61 9.4 3.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Ac81 PF05820.11 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.97 9.0 6.3 1.1 8.8 6.3 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 SdpI PF13630.6 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 2.4 8.4 4.6 3.5 7.8 4.6 1.3 1 0 0 1 1 1 0 SdpI/YhfL protein family FSA_C PF10479.9 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_2 - 0.02 13.1 10.4 0.019 13.1 10.4 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Mucin PF01456.17 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_2 - 0.18 11.8 33.4 0.22 11.5 33.4 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein Secretin_N_2 PF07655.13 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 0.0023 18.5 11.7 0.0028 18.2 11.7 1.1 1 0 0 1 1 1 1 Secretin N-terminal domain CDK2AP PF09806.9 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 0.15 12.1 7.6 0.17 11.9 7.6 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein DUF4614 PF15391.6 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 0.37 10.8 10.8 0.38 10.7 10.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) Apt1 PF10351.9 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 0.96 8.2 6.5 0.89 8.3 6.5 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain CCDC24 PF15669.5 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 2.4 8.0 7.5 2.9 7.7 7.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family GP40 PF11025.8 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 2.7 7.7 10.6 3.2 7.5 10.6 1.1 1 0 0 1 1 1 0 Glycoprotein GP40 of Cryptosporidium SSP160 PF06933.11 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 2.8 6.0 20.7 3.2 5.8 20.7 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 RSRP PF17069.5 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 4.3 6.8 27.9 4.9 6.6 27.9 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Macoilin PF09726.9 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 4.5 5.7 9.3 4.3 5.8 9.3 1.0 1 0 0 1 1 1 0 Macoilin family CCDC106 PF15794.5 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 4.7 6.9 7.3 5 6.8 7.3 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 X PF00739.19 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 6.6 6.9 11.3 8.1 6.6 11.3 1.1 1 0 0 1 1 1 0 Trans-activation protein X DUF515 PF04415.12 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 9.9 4.4 17.0 10 4.4 17.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Phage_holin_3_6 PF07332.11 NODE_60363_length_273_cov_4.432773_g52423_i0reverse_frame_3 - 0.11 12.6 1.1 0.12 12.4 1.1 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4834 PF16118.5 NODE_60363_length_273_cov_4.432773_g52423_i0forward_frame_3 - 0.025 15.5 0.2 0.03 15.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) NAD_binding_7 PF13241.6 NODE_60360_length_273_cov_5.247899_g52420_i0reverse_frame_2 - 0.11 13.0 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative NAD(P)-binding APC_N_CC PF16689.5 NODE_60356_length_273_cov_20.516807_g52416_i0reverse_frame_3 - 0.041 13.9 0.0 0.062 13.4 0.0 1.2 1 0 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain dbPDZ_assoc PF16610.5 NODE_60356_length_273_cov_20.516807_g52416_i0reverse_frame_3 - 0.079 13.2 0.8 0.15 12.3 0.8 1.5 1 1 0 1 1 1 0 Unstructured region between two PDZ domains on Dlg5 DHR-2 PF06920.13 NODE_60355_length_273_cov_23.071429_g52415_i0reverse_frame_3 - 0.0077 14.9 0.6 0.0091 14.7 0.6 1.0 1 0 0 1 1 1 1 Dock homology region 2 RITA PF17066.5 NODE_60350_length_273_cov_41.189076_g52410_i0reverse_frame_3 - 0.067 12.8 3.0 0.47 10.0 0.1 2.0 1 1 1 2 2 2 0 RBPJ-interacting and tubulin associated protein Rpr2 PF04032.16 NODE_60350_length_273_cov_41.189076_g52410_i0reverse_frame_2 - 0.74 10.1 6.7 1.2 9.5 6.7 1.4 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF5570 PF17731.1 NODE_60349_length_273_cov_47.079832_g52409_i0reverse_frame_2 - 0.0029 17.7 1.3 0.0032 17.5 1.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5570) DUF3336 PF11815.8 NODE_60342_length_273_cov_60.025210_g52402_i0forward_frame_3 - 0.046 13.4 0.4 0.064 13.0 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3336) Fer4_21 PF14697.6 NODE_60338_length_273_cov_66.777311_g52398_i0reverse_frame_3 - 0.021 15.0 0.7 0.026 14.7 0.7 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain YLP PF02757.17 NODE_60337_length_273_cov_68.315126_g52397_i0forward_frame_3 - 0.057 13.4 4.1 5.2 7.3 0.3 2.3 2 0 0 2 2 2 0 YLP motif DUF1179 PF06678.11 NODE_60337_length_273_cov_68.315126_g52397_i0forward_frame_2 - 5.3 7.1 5.7 7.2 6.6 1.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1179) TTL PF03133.15 NODE_60336_length_273_cov_69.117647_g52396_i0forward_frame_3 - 5.2e-07 29.1 0.1 6.3e-07 28.8 0.1 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family preSET_CXC PF18264.1 NODE_60333_length_273_cov_77.403361_g52393_i0reverse_frame_3 - 3.8 8.1 8.2 0.9 10.1 4.9 1.7 2 0 0 2 2 2 0 CXC domain DUF2390 PF09523.10 NODE_60333_length_273_cov_77.403361_g52393_i0forward_frame_2 - 0.093 13.1 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2390) TMEM40 PF15817.5 NODE_60332_length_273_cov_80.878151_g52392_i0forward_frame_3 - 0.091 12.5 1.2 0.1 12.3 1.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 40 family Borrelia_P83 PF05262.11 NODE_60331_length_273_cov_85.848739_g52391_i0forward_frame_2 - 1.5 7.3 9.3 1.6 7.1 9.3 1.2 1 1 0 1 1 1 0 Borrelia P83/100 protein DAN PF03045.15 NODE_60329_length_273_cov_89.449580_g52389_i0reverse_frame_3 - 0.035 14.1 0.3 0.048 13.7 0.3 1.2 1 0 0 1 1 1 0 DAN domain Arm_vescicular PF18770.1 NODE_60323_length_273_cov_129.247899_g52383_i0forward_frame_3 - 0.084 12.8 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor Rhabdo_matrix PF03397.14 NODE_60316_length_273_cov_176.079832_g52376_i0reverse_frame_3 - 0.069 12.9 0.1 0.075 12.8 0.1 1.0 1 0 0 1 1 1 0 Rhabdovirus matrix protein Phage_T4_Gp30_7 PF06919.11 NODE_60315_length_273_cov_201.840336_g52375_i0reverse_frame_2 - 0.11 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Phage Gp30.7 protein TA0956 PF11513.8 NODE_60308_length_273_cov_1488.373950_g52368_i0reverse_frame_2 - 0.046 14.0 0.5 0.051 13.8 0.5 1.2 1 0 0 1 1 1 0 Thermoplasma acidophilum protein TA0956 Chloroa_b-bind PF00504.21 NODE_60305_length_273_cov_2230.861345_g52365_i0reverse_frame_3 - 1.9e-08 35.0 0.0 1.9e-08 35.0 0.0 1.2 1 0 0 1 1 1 1 Chlorophyll A-B binding protein AXE1 PF05448.12 NODE_60305_length_273_cov_2230.861345_g52365_i0forward_frame_3 - 0.11 11.1 0.1 0.14 10.8 0.1 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) UNC119_bdg PF15435.6 NODE_60304_length_273_cov_9678.827731_g52364_i0forward_frame_2 - 0.019 14.5 0.1 0.025 14.2 0.1 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue DUF2721 PF11026.8 ORF99717 - 0.17 11.8 0.1 0.2 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Abi_C PF14355.6 ORF99622 - 0.057 13.5 0.0 0.075 13.1 0.0 1.1 1 0 0 1 1 1 0 Abortive infection C-terminus DUF2385 PF09539.10 ORF99224 - 0.2 12.2 2.2 0.24 12.0 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2385) MFS_2 PF13347.6 ORF99065 - 0.13 10.8 0.1 0.15 10.6 0.1 1.1 1 0 0 1 1 1 0 MFS/sugar transport protein SapB_1 PF05184.15 ORF99065 - 0.16 12.1 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Saposin-like type B, region 1 Aa_trans PF01490.18 ORF98407 - 0.0024 16.7 1.2 0.0029 16.4 1.2 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein TMEM51 PF15345.6 ORF98396 - 0.023 14.6 0.2 0.023 14.6 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 LSM_int_assoc PF16605.5 ORF98187 - 0.062 13.4 2.3 0.29 11.3 0.1 2.1 1 1 1 2 2 2 0 LSM-interacting associated unstructured DUF1499 PF07386.11 ORF97997 - 2e-17 63.8 0.0 2.5e-17 63.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) F-box-like PF12937.7 ORF97188 - 0.064 13.2 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 F-box-like Ank_4 PF13637.6 ORF97038 - 2e-18 66.5 0.6 5.6e-07 30.0 0.0 2.3 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF97038 - 1.2e-16 61.0 0.1 2.5e-10 40.8 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF97038 - 5.7e-12 45.5 0.2 0.001 19.4 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF97038 - 1.4e-10 41.2 0.7 0.00049 20.3 0.1 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF97038 - 1.3e-09 37.5 0.1 0.013 16.0 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks266.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks266.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks266.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks266.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:02:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cas9_PI2 PF18070.1 ORF96813 - 0.1 13.3 0.5 0.18 12.5 0.2 1.7 1 1 0 1 1 1 0 CRISPR-Cas9 PI domain K1 PF02960.14 ORF94611 - 0.067 13.3 1.9 0.093 12.8 1.9 1.2 1 0 0 1 1 1 0 K1 glycoprotein PRP4 PF08799.11 ORF94611 - 0.08 12.5 0.3 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 pre-mRNA processing factor 4 (PRP4) like Yip1 PF04893.17 ORF9430 - 0.00013 21.8 11.6 0.00015 21.5 11.6 1.2 1 0 0 1 1 1 1 Yip1 domain UPF0640 PF15114.6 ORF9430 - 0.0092 15.8 1.0 0.013 15.2 0.4 1.7 1 1 1 2 2 2 1 Uncharacterised protein family UPF0640 Yip1 PF04893.17 ORF9429 - 0.0026 17.5 0.1 0.0029 17.4 0.1 1.1 1 0 0 1 1 1 1 Yip1 domain TFIIB_C_1 PF18542.1 ORF92662 - 0.067 13.2 0.0 0.074 13.1 0.0 1.2 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 ASFV_J13L PF05568.11 ORF9245 - 0.053 13.3 2.0 0.061 13.1 2.0 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Yip1 PF04893.17 ORF91831 - 0.00013 21.8 11.6 0.00015 21.5 11.6 1.2 1 0 0 1 1 1 1 Yip1 domain UPF0640 PF15114.6 ORF91831 - 0.0092 15.8 1.0 0.013 15.2 0.4 1.7 1 1 1 2 2 2 1 Uncharacterised protein family UPF0640 Sugar_tr PF00083.24 ORF91484 - 1.9e-09 36.9 0.0 2e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter LidA_Long_CC PF18641.1 ORF8995 - 0.032 14.3 0.1 0.043 13.9 0.1 1.1 1 0 0 1 1 1 0 LidA long coiled-coil domain Acetyltransf_1 PF00583.25 ORF89902 - 4.1e-09 36.7 0.0 4.4e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF89902 - 6.2e-07 29.8 0.0 8.6e-07 29.3 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF89902 - 2.7e-06 27.3 0.0 3.1e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF89902 - 0.0056 16.8 0.0 0.0066 16.5 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 ORF89902 - 0.15 12.1 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase UCH PF00443.29 ORF88679 - 3.7e-08 33.2 0.8 3.9e-08 33.1 0.8 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF88679 - 0.0011 18.6 0.1 0.0011 18.6 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Peptidase_C39 PF03412.15 ORF88679 - 0.11 12.4 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Peptidase C39 family K1 PF02960.14 ORF88152 - 0.067 13.3 1.9 0.093 12.8 1.9 1.2 1 0 0 1 1 1 0 K1 glycoprotein PRP4 PF08799.11 ORF88152 - 0.08 12.5 0.3 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 pre-mRNA processing factor 4 (PRP4) like Chromo PF00385.24 ORF87791 - 5.8e-14 51.7 0.2 8.9e-14 51.1 0.2 1.3 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain Tudor-knot PF11717.8 ORF87791 - 0.014 15.3 0.3 0.023 14.6 0.3 1.4 1 0 0 1 1 1 0 RNA binding activity-knot of a chromodomain Chromo_shadow PF01393.19 ORF87791 - 0.04 14.0 0.0 0.082 13.0 0.0 1.5 1 0 0 1 1 1 0 Chromo shadow domain PGF-CTERM PF18204.1 ORF8776 - 4.5 7.4 8.6 10 6.2 0.3 2.2 2 0 0 2 2 2 0 PGF-CTERM motif K1 PF02960.14 ORF87576 - 0.067 13.3 1.9 0.093 12.8 1.9 1.2 1 0 0 1 1 1 0 K1 glycoprotein PRP4 PF08799.11 ORF87576 - 0.08 12.5 0.3 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 pre-mRNA processing factor 4 (PRP4) like PSCyt2 PF07583.11 ORF86322 - 0.057 13.3 0.0 0.31 11.0 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1549) DUF2963 PF11178.8 ORF86094 - 0.034 13.9 0.5 1.5 8.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2963) TMEM240 PF15207.6 ORF86094 - 2 8.1 4.6 1.1 8.9 0.5 1.9 2 0 0 2 2 2 0 TMEM240 family SUIM_assoc PF16619.5 ORF86051 - 0.13 12.3 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 DUF4529 PF15032.6 ORF84110 - 0.017 14.3 0.1 0.018 14.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) Sugar_tr PF00083.24 ORF84005 - 1.9e-09 36.9 0.0 2e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2963 PF11178.8 ORF83801 - 0.034 13.9 0.5 1.5 8.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2963) TMEM240 PF15207.6 ORF83801 - 2 8.1 4.6 1.1 8.9 0.5 1.9 2 0 0 2 2 2 0 TMEM240 family Ribonuc_L-PSP PF01042.21 ORF82657 - 1.3e-15 57.4 0.0 1.5e-15 57.3 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP CD52 PF15116.6 ORF82657 - 0.025 14.6 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 CAMPATH-1 antigen Enkurin PF13864.6 ORF8251 - 1.3e-16 60.8 10.1 1.6e-16 60.5 10.1 1.1 1 0 0 1 1 1 1 Calmodulin-binding Inovirus_Gp2 PF11726.8 ORF8251 - 0.019 14.9 0.2 0.021 14.8 0.2 1.0 1 0 0 1 1 1 0 Inovirus Gp2 Synaphin PF05835.12 ORF8251 - 0.021 15.1 5.8 0.023 15.0 5.8 1.0 1 0 0 1 1 1 0 Synaphin protein DUF1572 PF07609.11 ORF8251 - 0.029 14.2 0.7 0.034 13.9 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) Holin_BhlA PF10960.8 ORF8251 - 0.1 12.6 6.5 3.6 7.6 1.9 2.2 2 0 0 2 2 2 0 BhlA holin family DUF2968 PF11180.8 ORF8251 - 0.14 11.8 4.3 0.18 11.4 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Cep57_MT_bd PF06657.13 ORF8251 - 0.17 12.4 4.7 0.19 12.2 4.0 1.4 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 DUF1547 PF07577.11 ORF82258 - 0.0019 18.6 0.0 0.0024 18.2 0.0 1.2 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1547) Fungal_TACC PF12709.7 ORF82258 - 0.037 14.5 1.2 0.057 13.9 1.2 1.3 1 0 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins TFIIS_M PF07500.14 ORF82258 - 0.065 13.7 3.6 0.082 13.4 3.6 1.1 1 0 0 1 1 1 0 Transcription factor S-II (TFIIS), central domain Pex24p PF06398.11 ORF81670 - 2.3 7.1 9.3 2.5 7.0 9.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin HAP2-GCS1 PF10699.9 ORF81351 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Male gamete fusion factor Bac_DNA_binding PF00216.21 ORF81089 - 3.9e-33 113.5 1.5 4.3e-33 113.4 1.5 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 ORF81089 - 3.5e-08 33.6 0.1 3.7e-08 33.5 0.1 1.0 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 ORF81089 - 6.3e-06 26.0 0.1 8.6e-06 25.5 0.1 1.1 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 ORF81089 - 0.0014 18.8 0.0 0.002 18.3 0.0 1.2 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 ORF81089 - 0.0027 17.8 0.0 0.003 17.7 0.0 1.1 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 DUF2267 PF10025.9 ORF81089 - 0.055 13.7 0.2 0.085 13.1 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) NA37 PF04245.13 ORF81089 - 0.075 12.5 0.1 0.076 12.5 0.1 1.1 1 0 0 1 1 1 0 37-kD nucleoid-associated bacterial protein GWT1 PF06423.12 ORF79293 - 0.02 15.0 0.4 0.023 14.8 0.4 1.1 1 0 0 1 1 1 0 GWT1 Radical_SAM_C PF16199.5 ORF79166 - 0.027 14.5 0.0 0.036 14.1 0.0 1.2 1 0 0 1 1 1 0 Radical_SAM C-terminal domain DUF1856 PF08983.10 ORF79166 - 0.065 13.5 1.3 0.096 12.9 1.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1856) oligo_HPY PF08352.12 ORF78818 - 0.2 12.2 2.4 0.21 12.1 1.7 1.5 1 1 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region Sulfotransfer_4 PF17784.1 ORF78346 - 4.6e-15 56.0 0.3 6e-15 55.7 0.3 1.2 1 0 0 1 1 1 1 Sulfotransferase domain V_ATPase_I PF01496.19 ORF77937 - 5.9e-09 34.4 0.3 6.1e-09 34.4 0.3 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family SLY PF12485.8 ORF77726 - 0.12 13.1 15.7 0.16 12.7 15.7 1.2 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein RabGAP-TBC PF00566.18 ORF77041 - 3.7e-30 105.2 2.0 3.9e-30 105.1 2.0 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Fumarate_red_C PF02300.17 ORF76774 - 0.039 14.0 1.5 0.058 13.5 1.5 1.4 1 1 0 1 1 1 0 Fumarate reductase subunit C PDDEXK_10 PF07788.11 ORF76761 - 0.024 14.5 0.3 0.035 14.0 0.3 1.2 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Arm_vescicular PF18770.1 ORF76338 - 0.064 13.2 0.0 0.09 12.7 0.0 1.1 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor TrkH PF02386.16 ORF76009 - 1.8e-21 76.2 9.3 1.9e-21 76.1 9.3 1.0 1 0 0 1 1 1 1 Cation transport protein RCC1_2 PF13540.6 ORF75623 - 0.0015 18.3 0.0 0.0026 17.5 0.0 1.4 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF75623 - 0.0037 17.8 0.0 0.021 15.4 0.0 2.0 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat Yip1 PF04893.17 ORF75550 - 0.00013 21.8 11.6 0.00015 21.5 11.6 1.2 1 0 0 1 1 1 1 Yip1 domain UPF0640 PF15114.6 ORF75550 - 0.0092 15.8 1.0 0.013 15.2 0.4 1.7 1 1 1 2 2 2 1 Uncharacterised protein family UPF0640 ATP-synt_DE PF00401.20 ORF75138 - 3.9e-14 52.6 6.2 5e-14 52.3 6.2 1.2 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ATP-synt_DE_N PF02823.16 ORF75138 - 3e-09 36.7 0.0 5.4e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GnsAB_toxin PF08178.11 ORF75138 - 0.95 9.4 3.4 3.6 7.6 0.5 2.2 2 0 0 2 2 2 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system Ribosomal_L31 PF01197.18 ORF74278 - 4 7.7 6.6 0.38 11.0 1.0 2.2 2 1 0 2 2 2 0 Ribosomal protein L31 DUF1433 PF07252.11 ORF73519 - 0.039 14.2 0.4 0.091 13.0 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1433) HTH_31 PF13560.6 ORF72586 - 0.21 12.0 5.6 0.94 9.9 2.2 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Baculo_E56 PF04639.12 ORF72238 - 0.17 11.2 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope Saf_2TM PF18303.1 ORF72103 - 0.15 11.7 0.9 0.17 11.5 0.9 1.0 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain DUF4332 PF14229.6 ORF71961 - 0.16 12.2 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) Barstar PF01337.18 ORF71771 - 1.8e-05 24.7 0.2 2.2e-05 24.4 0.2 1.2 1 0 0 1 1 1 1 Barstar (barnase inhibitor) DUF4391 PF14335.6 ORF71771 - 0.053 13.2 0.0 0.055 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) WD40 PF00400.32 ORF70808 - 0.0036 18.1 0.1 0.52 11.3 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat 4HB PF17947.1 ORF70808 - 0.15 12.1 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Four helical bundle domain Pyr_redox_2 PF07992.14 ORF69303 - 0.00023 20.5 0.1 0.00025 20.4 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 ORF69303 - 0.14 12.2 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 FAD-NAD(P)-binding F-box-like_2 PF13013.6 ORF68520 - 0.018 15.0 0.3 0.02 14.8 0.3 1.3 1 0 0 1 1 1 0 F-box-like domain CARD PF00619.21 ORF68520 - 0.058 13.4 0.0 0.071 13.1 0.0 1.2 1 0 0 1 1 1 0 Caspase recruitment domain T2SSppdC PF12528.8 ORF68506 - 0.053 14.3 0.0 0.073 13.8 0.0 1.2 1 0 0 1 1 1 0 Type II secretion prepilin peptidase dependent protein C UQ_con PF00179.26 ORF68491 - 6.1e-13 48.6 0.2 6.7e-13 48.5 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RRM_1 PF00076.22 ORF68018 - 8.2e-05 22.3 0.0 0.0001 22.0 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF2729 PF10870.8 ORF68018 - 0.17 11.8 0.1 0.25 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2729) ShK PF01549.24 ORF680 - 6.7e-07 29.7 7.1 6.7e-07 29.7 7.1 2.6 2 1 0 2 2 2 1 ShK domain-like PPO1_KFDV PF12143.8 ORF67493 - 0.13 12.3 0.1 0.14 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF_B2219) LSM PF01423.22 ORF66231 - 1e-17 63.5 0.6 1.3e-17 63.2 0.6 1.2 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 ORF66231 - 0.0023 17.5 0.0 0.003 17.2 0.0 1.3 1 0 0 1 1 1 1 Hfq protein DUF842 PF05811.13 ORF64186 - 0.82 9.4 8.7 1.1 8.9 8.7 1.3 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) RRM_1 PF00076.22 ORF63799 - 0.2 11.5 0.0 0.35 10.7 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Med27 PF11571.8 ORF63787 - 0.065 13.6 0.4 0.092 13.1 0.4 1.4 1 1 0 1 1 1 0 Mediator complex subunit 27 DUF2949 PF11165.8 ORF63787 - 0.099 13.0 0.1 0.19 12.1 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2949) Ribosomal_L27A PF00828.19 ORF63740 - 1.3e-15 58.2 0.0 1.3e-15 58.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Sugar-bind PF04198.13 ORF63740 - 0.049 12.8 0.0 0.054 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative sugar-binding domain SHIPPO-rpt PF07004.12 ORF6366 - 0.02 15.8 0.7 0.036 15.0 0.0 1.8 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat Desulfoferrod_N PF06397.12 ORF63622 - 0.15 11.7 6.4 0.13 11.9 1.9 2.3 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain UFD1 PF03152.14 ORF63447 - 0.045 13.2 0.1 0.046 13.2 0.1 1.1 1 0 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 But2 PF09792.9 ORF61607 - 0.11 12.9 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin 3 binding protein But2 C-terminal domain VF530 PF09905.9 ORF61555 - 0.18 12.0 0.4 0.29 11.4 0.4 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 DUF559 PF04480.12 ORF61445 - 0.042 13.7 0.0 0.059 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF559) BCAS3 PF12490.8 ORF61445 - 0.2 11.1 0.0 0.23 10.9 0.0 1.0 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 UCR_hinge PF02320.16 ORF60484 - 2e-17 63.2 3.0 2.4e-17 62.9 3.0 1.1 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein CHCH PF06747.13 ORF60484 - 0.064 13.4 3.8 3.3 8.0 0.2 2.3 2 0 0 2 2 2 0 CHCH domain Methyltrans_RNA PF04452.14 ORF60269 - 1.6e-12 47.3 0.1 1.7e-12 47.2 0.1 1.1 1 0 0 1 1 1 1 RNA methyltransferase Fib_alpha PF08702.10 ORF59599 - 0.017 15.3 3.1 0.018 15.2 2.7 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family XhlA PF10779.9 ORF59599 - 0.027 14.7 1.9 0.046 13.9 1.9 1.4 1 0 0 1 1 1 0 Haemolysin XhlA Pro_isomerase PF00160.21 ORF5937 - 0.001 19.4 0.0 0.0012 19.1 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Herpes_gp2 PF05955.11 ORF59340 - 0.062 12.8 0.1 0.072 12.6 0.1 1.1 1 0 0 1 1 1 0 Equine herpesvirus glycoprotein gp2 Peptidase_C97 PF05903.14 ORF59336 - 1.4e-19 70.4 0.0 1.5e-19 70.3 0.0 1.0 1 0 0 1 1 1 1 PPPDE putative peptidase domain BRX_N PF13713.6 ORF59336 - 0.099 12.4 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Transcription factor BRX N-terminal domain DUF2569 PF10754.9 ORF57029 - 0.033 14.6 0.2 0.038 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) DUF1073 PF06381.11 ORF55896 - 5.2e-25 88.0 0.0 5.6e-25 87.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1073) Arrestin_N PF00339.29 ORF55651 - 3.8e-06 27.0 0.2 4.4e-06 26.8 0.2 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 ORF55651 - 0.1 12.3 0.2 0.12 12.1 0.2 1.2 1 1 0 1 1 1 0 Arrestin_N terminal like Arrestin_N PF00339.29 ORF55650 - 0.00073 19.6 0.0 0.00087 19.4 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Glutaredoxin PF00462.24 ORF55096 - 6.1e-17 61.6 0.1 7.8e-17 61.2 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 ORF55096 - 4.6e-05 23.8 0.0 5.3e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_3 PF13192.6 ORF55096 - 0.00025 21.1 0.0 0.00052 20.0 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin domain SH3BGR PF04908.15 ORF55096 - 0.00046 20.3 0.1 0.00063 19.9 0.1 1.2 1 0 0 1 1 1 1 SH3-binding, glutamic acid-rich protein Thioredoxin_2 PF13098.6 ORF55096 - 0.0012 19.2 0.1 0.0019 18.6 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain TraF PF13728.6 ORF55096 - 0.0016 18.3 0.0 0.002 18.0 0.0 1.0 1 0 0 1 1 1 1 F plasmid transfer operon protein DUF953 PF06110.11 ORF55096 - 0.039 13.6 0.0 0.048 13.3 0.0 1.3 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Got1 PF04178.12 ORF55031 - 5.1e-06 26.9 17.6 5.6e-06 26.7 17.6 1.1 1 0 0 1 1 1 1 Got1/Sft2-like family DUF2892 PF11127.8 ORF55031 - 0.11 12.6 13.3 2.9 8.0 13.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2892) MGC-24 PF05283.11 ORF55031 - 1.6 9.1 2.7 0.95 9.9 1.0 1.5 1 1 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF373 PF04123.13 ORF55031 - 8.3 5.7 9.6 17 4.8 9.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF373) Antimicrobial25 PF16839.5 ORF54768 - 0.0074 16.4 1.7 0.014 15.4 1.7 1.5 1 1 0 1 1 1 1 Nematode antimicrobial peptide Hid1 PF12722.7 ORF54598 - 4.7e-10 38.3 0.0 4.8e-10 38.3 0.0 1.0 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein Dymeclin PF09742.9 ORF54598 - 0.097 11.1 0.0 0.11 10.9 0.0 1.0 1 0 0 1 1 1 0 Dyggve-Melchior-Clausen syndrome protein Glutaredoxin PF00462.24 ORF54509 - 5.1e-14 52.2 0.1 6.8e-14 51.8 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 ORF54509 - 4.4e-05 23.8 0.0 5.7e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF54509 - 0.00053 20.2 0.0 0.00067 19.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Cohesin PF00963.18 ORF54506 - 0.0057 16.9 0.1 0.0065 16.7 0.1 1.1 1 0 0 1 1 1 1 Cohesin domain Cation_ATPase_C PF00689.21 ORF54120 - 0.00013 21.7 0.4 0.00015 21.5 0.4 1.0 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus GNAT_like PF18407.1 ORF53996 - 0.21 11.9 3.8 0.76 10.2 0.2 2.3 2 0 0 2 2 2 0 GCN5-related N-acetyltransferase like domain Glyco_transf_41 PF13844.6 ORF53987 - 0.052 12.0 0.0 0.058 11.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 41 ERGIC_N PF13850.6 ORF53848 - 0.035 14.4 0.1 0.04 14.3 0.1 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF3224 PF11528.8 ORF53779 - 0.013 15.3 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3224) DUSP PF06337.12 ORF53529 - 6.9e-12 45.8 1.3 8.4e-12 45.6 1.3 1.1 1 0 0 1 1 1 1 DUSP domain Fumarate_red_C PF02300.17 ORF53486 - 0.039 14.0 1.5 0.058 13.5 1.5 1.4 1 1 0 1 1 1 0 Fumarate reductase subunit C DUF3810 PF12725.7 ORF5330 - 6.7 6.0 9.6 7.5 5.8 9.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) PFU PF09070.11 ORF53003 - 8.9e-05 22.7 0.2 0.0001 22.6 0.2 1.1 1 0 0 1 1 1 1 PFU (PLAA family ubiquitin binding) DUF2963 PF11178.8 ORF52892 - 0.034 13.9 0.5 1.5 8.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2963) TMEM240 PF15207.6 ORF52892 - 2 8.1 4.6 1.1 8.9 0.5 1.9 2 0 0 2 2 2 0 TMEM240 family bZIP_1 PF00170.21 ORF52855 - 8e-08 32.3 3.8 1.1e-07 31.8 3.8 1.1 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF52855 - 1.4e-06 28.3 1.1 1.8e-06 27.9 1.1 1.1 1 0 0 1 1 1 1 Basic region leucine zipper DUF898 PF05987.13 ORF52773 - 0.064 12.3 6.5 0.084 11.9 6.5 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF5480 PF17576.2 ORF52773 - 1.2 9.2 7.6 1.1 9.2 6.6 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5480) Peptidase_C34 PF05413.11 ORF52568 - 0.17 12.2 0.1 3.6 7.9 0.0 2.0 1 1 1 2 2 2 0 Putative closterovirus papain-like endopeptidase DUF3175 PF11373.8 ORF52186 - 0.003 17.7 0.0 0.0041 17.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3175) HTH_9 PF08221.11 ORF51695 - 0.14 12.3 0.1 0.22 11.7 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Fer4_9 PF13187.6 ORF50958 - 0.013 15.7 3.0 0.013 15.7 3.0 1.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain LcrV PF04792.12 ORF50723 - 0.038 13.3 0.9 0.039 13.2 0.9 1.1 1 0 0 1 1 1 0 V antigen (LcrV) protein Dynein_light PF01221.18 ORF50058 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF50058 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin PTS-HPr PF00381.19 ORF49108 - 7.9e-23 80.5 0.5 8.6e-23 80.4 0.5 1.0 1 0 0 1 1 1 1 PTS HPr component phosphorylation site PPR_long PF17177.4 ORF49011 - 0.066 12.6 0.0 0.083 12.3 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP zf-NF-X1 PF01422.17 ORF47836 - 0.19 11.8 1.9 0.19 11.8 1.9 2.6 3 0 0 3 3 3 0 NF-X1 type zinc finger DUF5351 PF17302.2 ORF47758 - 0.08 13.2 0.2 0.18 12.0 0.2 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5351) DUF3671 PF12420.8 ORF46964 - 0.065 13.3 7.1 0.065 13.3 5.6 1.8 1 1 0 1 1 1 0 Protein of unknown function Glyco_transf_41 PF13844.6 ORF469 - 0.052 12.0 0.0 0.058 11.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 41 ZapB PF06005.12 ORF46054 - 0.0002 21.7 5.2 0.00038 20.8 5.2 1.5 1 0 0 1 1 1 1 Cell division protein ZapB CorA PF01544.18 ORF46054 - 0.0022 17.4 2.1 0.0025 17.2 2.1 1.1 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Tropomyosin PF00261.20 ORF46054 - 0.0056 16.1 9.6 0.0066 15.8 9.6 1.1 1 0 0 1 1 1 1 Tropomyosin MCC-bdg_PDZ PF10506.9 ORF46054 - 0.0085 16.1 2.2 0.36 10.9 2.2 2.2 1 1 0 1 1 1 1 PDZ domain of MCC-2 bdg protein for Usher syndrome KASH_CCD PF14662.6 ORF46054 - 0.0097 15.8 10.2 0.017 15.0 10.2 1.4 1 1 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Fez1 PF06818.15 ORF46054 - 0.011 16.2 5.6 0.012 16.1 5.6 1.0 1 0 0 1 1 1 0 Fez1 Spc7 PF08317.11 ORF46054 - 0.014 14.3 6.8 0.015 14.2 6.8 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein TMF_TATA_bd PF12325.8 ORF46054 - 0.019 15.2 6.6 0.025 14.8 5.3 1.4 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding APG6_N PF17675.1 ORF46054 - 0.019 15.5 7.2 0.024 15.2 7.2 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region CENP-K PF11802.8 ORF46054 - 0.045 13.3 8.5 0.05 13.2 8.5 1.1 1 0 0 1 1 1 0 Centromere-associated protein K LMBR1 PF04791.16 ORF46054 - 0.068 12.1 3.7 0.075 11.9 3.7 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2205 PF10224.9 ORF46054 - 0.078 13.0 4.6 0.052 13.6 3.0 1.6 1 1 1 2 2 2 0 Short coiled-coil protein LUC7 PF03194.15 ORF46054 - 0.083 12.5 6.1 0.097 12.3 6.1 1.1 1 0 0 1 1 1 0 LUC7 N_terminus Mto2_bdg PF12808.7 ORF46054 - 0.094 13.0 2.4 0.23 11.8 2.4 1.7 1 1 0 1 1 1 0 Micro-tubular organiser Mto1 C-term Mto2-binding region DivIVA PF05103.13 ORF46054 - 0.1 12.7 7.9 0.15 12.1 7.9 1.4 1 1 0 1 1 1 0 DivIVA protein Swi5 PF07061.11 ORF46054 - 0.18 11.9 8.2 0.073 13.2 3.8 2.2 1 1 1 2 2 2 0 Swi5 SlyX PF04102.12 ORF46054 - 0.18 12.4 1.3 5.3 7.7 0.2 2.1 1 1 1 2 2 2 0 SlyX ATG16 PF08614.11 ORF46054 - 0.19 12.0 6.7 0.088 13.0 4.5 1.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) SOGA PF11365.8 ORF46054 - 0.24 12.6 6.9 0.37 11.9 4.8 1.9 1 1 1 2 2 2 0 Protein SOGA BLOC1_2 PF10046.9 ORF46054 - 0.29 11.4 10.3 1.6 9.1 5.1 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMPIT PF07851.13 ORF46054 - 0.33 10.2 6.5 0.36 10.0 6.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF641 PF04859.12 ORF46054 - 0.35 11.2 8.0 0.42 11.0 4.8 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF3450 PF11932.8 ORF46054 - 0.37 10.1 5.5 1.3 8.3 5.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) DUF3837 PF12939.7 ORF46054 - 0.46 10.9 9.5 3.4 8.1 1.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3837) KLRAQ PF10205.9 ORF46054 - 0.48 10.7 10.9 0.58 10.4 3.5 2.3 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein DivIC PF04977.15 ORF46054 - 0.74 9.6 9.1 0.71 9.7 2.0 2.5 1 1 2 3 3 3 0 Septum formation initiator RICH PF05062.12 ORF46054 - 0.8 10.1 15.2 3.8 7.9 15.2 1.9 1 1 0 1 1 1 0 RICH domain YabA PF06156.13 ORF46054 - 0.82 10.3 8.4 1.4 9.6 8.4 1.5 1 1 0 1 1 1 0 Initiation control protein YabA TMF_DNA_bd PF12329.8 ORF46054 - 0.92 9.5 14.9 0.44 10.6 12.0 1.8 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Fib_alpha PF08702.10 ORF46054 - 1.5 9.0 9.1 1.9 8.7 6.3 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Tfb5 PF06331.12 ORF46054 - 2.3 8.2 8.5 0.55 10.3 3.6 2.3 2 2 0 2 2 2 0 Transcription factor TFIIH complex subunit Tfb5 XhlA PF10779.9 ORF46054 - 4 7.7 12.6 2 8.7 1.9 2.9 2 1 1 3 3 3 0 Haemolysin XhlA bZIP_1 PF00170.21 ORF46054 - 7.1 6.8 12.6 2 8.6 6.6 2.3 1 1 1 2 2 2 0 bZIP transcription factor Ras PF00071.22 ORF45918 - 3.5e-16 59.2 0.6 3.7e-16 59.1 0.6 1.0 1 0 0 1 1 1 1 Ras family Arf PF00025.21 ORF45918 - 2.5e-05 23.8 0.4 2.5e-05 23.8 0.4 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF45918 - 4.1e-05 23.8 0.7 9.5e-05 22.6 0.1 1.7 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Gtr1_RagA PF04670.12 ORF45918 - 0.013 14.8 0.3 0.015 14.7 0.3 1.0 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF2555 PF10742.9 ORF45918 - 0.035 13.9 0.1 0.067 13.0 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2555) NOG1 PF06858.14 ORF45918 - 0.077 12.8 0.1 0.15 11.8 0.1 1.5 1 1 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) Ribonuc_red_lgC PF02867.15 ORF45863 - 4.5e-08 32.1 0.0 5e-08 31.9 0.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain DUF4636 PF15468.6 ORF45485 - 0.0058 16.4 0.0 0.0063 16.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4636) ERGIC_N PF13850.6 ORF45485 - 0.0077 16.5 0.1 0.011 16.1 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Myelin_PLP PF01275.19 ORF45485 - 0.05 13.5 0.0 0.05 13.5 0.0 1.1 1 0 0 1 1 1 0 Myelin proteolipid protein (PLP or lipophilin) MatE PF01554.18 ORF44912 - 0.00029 20.5 1.7 0.00032 20.4 1.7 1.1 1 0 0 1 1 1 1 MatE Aa_trans PF01490.18 ORF44463 - 1.9e-14 53.2 2.4 2.2e-14 53.0 2.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Jagunal PF07086.12 ORF44463 - 0.06 13.4 1.8 0.23 11.5 0.4 1.9 1 1 0 2 2 2 0 Jagunal, ER re-organisation during oogenesis PsbN PF02468.15 ORF44463 - 0.097 12.5 0.4 0.097 12.5 0.4 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre N protein (psbN) Chordopox_L2 PF05803.12 ORF43528 - 0.098 12.5 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Chordopoxvirus L2 protein Dynein_light PF01221.18 ORF43230 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF43230 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin eIF-6 PF01912.18 ORF43202 - 5.3e-13 48.8 0.0 8.1e-13 48.2 0.0 1.3 1 0 0 1 1 1 1 eIF-6 family eIF-6 PF01912.18 ORF43201 - 2.2e-31 108.8 0.0 2.4e-31 108.6 0.0 1.0 1 0 0 1 1 1 1 eIF-6 family DNA_primase_lrg PF04104.14 ORF43201 - 0.0058 16.1 0.0 0.0067 15.9 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit DUF4407 PF14362.6 ORF43117 - 0.53 9.6 1.8 0.64 9.3 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4519 PF15012.6 ORF43117 - 4 7.7 5.3 2.1 8.6 0.9 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4519) RE_HindIII PF09518.10 ORF42892 - 0.0015 17.8 0.5 0.0016 17.7 0.5 1.0 1 0 0 1 1 1 1 HindIII restriction endonuclease T3SS_basalb_I PF17001.5 ORF42892 - 0.032 14.8 0.9 0.049 14.2 0.9 1.4 1 1 0 1 1 1 0 Type III secretion basal body protein I, YscI, HrpB, PscI IRF-2BP1_2 PF11261.8 ORF42892 - 0.13 11.9 0.0 0.49 10.0 0.0 1.8 2 0 0 2 2 2 0 Interferon regulatory factor 2-binding protein zinc finger Fib_alpha PF08702.10 ORF42892 - 0.22 11.7 5.2 0.12 12.5 3.5 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Avl9 PF09794.9 ORF42510 - 1.3e-10 40.6 1.2 0.00011 21.0 0.5 2.0 1 1 1 2 2 2 2 Transport protein Avl9 SPA PF08616.10 ORF42510 - 8.8e-07 28.9 0.7 1.5e-05 24.9 0.7 2.0 1 1 0 1 1 1 1 Stabilization of polarity axis DENN PF02141.21 ORF42510 - 0.023 14.7 0.7 0.033 14.1 0.6 1.4 1 1 0 1 1 1 0 DENN (AEX-3) domain GST_C PF00043.25 ORF42401 - 0.012 15.9 0.0 0.016 15.4 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Arrestin_N PF00339.29 ORF42097 - 0.0043 17.1 0.0 0.0052 16.9 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Dynein_light PF01221.18 ORF41152 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF41152 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin DUF2457 PF10446.9 ORF40910 - 3 6.9 4.5 3.1 6.8 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) PSI_integrin PF17205.3 ORF40551 - 0.021 14.6 3.3 0.021 14.6 3.3 1.5 2 0 0 2 2 2 0 Integrin plexin domain Sugar_tr PF00083.24 ORF40117 - 9.4e-08 31.3 0.0 9.7e-08 31.3 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Ham1p_like PF01725.16 ORF39352 - 3.4e-29 102.1 0.0 3.6e-29 102.0 0.0 1.0 1 0 0 1 1 1 1 Ham1 family K1 PF02960.14 ORF39084 - 0.067 13.3 1.9 0.093 12.8 1.9 1.2 1 0 0 1 1 1 0 K1 glycoprotein PRP4 PF08799.11 ORF39084 - 0.08 12.5 0.3 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 pre-mRNA processing factor 4 (PRP4) like TAF1D PF15333.6 ORF39003 - 2.7 7.7 5.9 2.7 7.7 5.9 1.2 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D tRNA-synt_1 PF00133.22 ORF38789 - 0.0001 20.7 0.0 0.00011 20.6 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Sdh5 PF03937.16 ORF38447 - 4e-05 23.5 0.1 5.2e-05 23.1 0.1 1.2 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase Pyr_redox_2 PF07992.14 ORF38442 - 0.00023 20.5 0.1 0.00025 20.4 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 ORF38442 - 0.14 12.2 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 FAD-NAD(P)-binding Desulfoferrod_N PF06397.12 ORF37803 - 0.15 11.7 6.4 0.13 11.9 1.9 2.3 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain DUF3811 PF11656.8 ORF37503 - 7.8e-40 135.2 5.5 8.8e-40 135.0 5.5 1.0 1 0 0 1 1 1 1 YjbD family (DUF3811) FKBP_C PF00254.28 ORF36695 - 0.0058 16.9 0.0 0.0083 16.4 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Apc13p PF05839.11 ORF36574 - 0.0006 19.9 1.1 0.0011 19.1 1.1 1.5 1 1 0 1 1 1 1 Apc13p protein MFS_1 PF07690.16 ORF36499 - 0.07 12.0 6.9 0.072 12.0 6.9 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily MORN PF02493.20 ORF36450 - 2e-19 68.2 23.3 7.3e-10 38.2 2.1 4.3 5 0 0 5 5 5 4 MORN repeat CshA_NR2 PF18651.1 ORF36418 - 0.048 12.9 0.0 0.054 12.7 0.0 1.0 1 0 0 1 1 1 0 Surface adhesin CshA non-repetitive domain 2 Baculo_E56 PF04639.12 ORF36388 - 0.17 11.2 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope Cwf_Cwc_15 PF04889.12 ORF36373 - 0.096 12.4 0.7 0.094 12.4 0.7 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein fragilysinNterm PF16376.5 ORF36046 - 0.045 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 N-terminal domain of fragilysin MCM6_C PF18263.1 ORF35294 - 0.079 13.2 0.1 0.097 12.9 0.1 1.2 1 0 0 1 1 1 0 MCM6 C-terminal winged-helix domain KorB PF08535.10 ORF3414 - 0.07 13.2 0.0 0.24 11.5 0.0 1.8 1 1 1 2 2 2 0 KorB domain Ank_4 PF13637.6 ORF33894 - 4.1e-15 55.9 0.2 1.1e-06 29.1 0.0 2.3 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF33894 - 6.3e-12 45.9 0.0 9.5e-12 45.3 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF33894 - 2.7e-09 36.5 0.0 0.0029 18.0 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF33894 - 4.6e-09 36.4 0.1 0.00016 21.9 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF33894 - 8.5e-09 35.5 0.0 0.023 15.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat ScdA_N PF04405.14 ORF33894 - 0.16 11.7 0.0 0.52 10.0 0.0 1.8 2 0 0 2 2 2 0 Domain of Unknown function (DUF542) RET_CLD1 PF17756.1 ORF33440 - 0.088 13.1 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 RET Cadherin like domain 1 RNA_pol_Rpb2_5 PF04567.17 ORF3270 - 1.7 9.2 5.6 3.1 8.4 5.6 1.5 1 1 0 1 1 1 0 RNA polymerase Rpb2, domain 5 PDZ_1 PF12812.7 ORF32567 - 0.099 12.7 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 PDZ-like domain DUF2963 PF11178.8 ORF321 - 0.034 13.9 0.5 1.5 8.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2963) TMEM240 PF15207.6 ORF321 - 2 8.1 4.6 1.1 8.9 0.5 1.9 2 0 0 2 2 2 0 TMEM240 family HTH_Tnp_1 PF01527.20 ORF3142 - 3.1e-13 49.8 0.9 4.1e-13 49.4 0.9 1.2 1 0 0 1 1 1 1 Transposase LZ_Tnp_IS481 PF13011.6 ORF3142 - 0.00052 20.5 0.1 0.0008 19.9 0.1 1.4 1 1 0 1 1 1 1 leucine-zipper of insertion element IS481 HTH_28 PF13518.6 ORF3142 - 0.0011 19.1 0.0 0.0017 18.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 ORF3142 - 0.0014 18.6 0.0 0.0024 17.9 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.6 ORF3142 - 0.0018 18.0 0.0 0.0032 17.2 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_17 PF12728.7 ORF3142 - 0.036 14.3 0.0 0.05 13.8 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain Abhydrolase_9 PF10081.9 ORF3142 - 0.038 13.1 0.0 0.041 13.0 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta-hydrolase family TnsD PF15978.5 ORF3142 - 0.088 11.8 4.2 0.92 8.4 0.1 1.9 1 1 1 2 2 2 0 Tn7-like transposition protein D M20_dimer PF07687.14 ORF31269 - 0.00085 19.2 0.0 0.001 18.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase dimerisation domain PDZ PF00595.24 ORF29984 - 0.015 15.7 0.0 0.021 15.1 0.0 1.4 1 0 0 1 1 1 0 PDZ domain PDZ_6 PF17820.1 ORF29984 - 0.055 13.3 0.1 0.11 12.4 0.1 1.7 2 0 0 2 2 2 0 PDZ domain MORN PF02493.20 ORF2955 - 2.5e-13 49.1 27.0 1.5e-08 34.0 2.5 4.3 5 0 0 5 5 5 3 MORN repeat DUF4812 PF16071.5 ORF29242 - 0.06 13.2 0.0 0.087 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4812) Glyco_hydro38C2 PF17677.1 ORF28588 - 0.067 13.3 0.0 0.071 13.2 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Sugar_tr PF00083.24 ORF28469 - 1.2e-05 24.3 0.0 1.4e-05 24.2 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF1514 PF07438.11 ORF28469 - 0.049 13.5 0.0 0.074 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1514) TAFII28 PF04719.14 ORF28266 - 0.071 13.2 0.1 0.093 12.8 0.1 1.3 1 1 0 1 1 1 0 hTAFII28-like protein conserved region Peptidase_C2 PF00648.21 ORF27669 - 8.7e-09 34.8 0.1 9.9e-09 34.6 0.1 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Nod1 PF17114.5 ORF27286 - 0.024 14.8 0.9 0.029 14.5 0.9 1.1 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 NEMP PF10225.9 ORF26933 - 0.24 11.0 3.8 0.51 10.0 0.5 1.9 1 1 1 2 2 2 0 NEMP family MORN PF02493.20 ORF2673 - 2.3e-18 64.9 11.6 3.4e-06 26.6 0.6 3.3 3 0 0 3 3 3 3 MORN repeat T4SS_CagC PF16943.5 ORF25906 - 0.1 12.8 0.1 0.17 12.1 0.1 1.3 1 1 0 1 1 1 0 Cag pathogenicity island, type IV secretory system F-box-like PF12937.7 ORF25615 - 0.064 13.2 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 F-box-like Pkinase PF00069.25 ORF24687 - 4e-11 42.8 0.0 4.2e-11 42.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24687 - 7.4e-05 22.2 0.0 7.7e-05 22.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Luciferase_N PF05295.11 ORF24494 - 0.037 14.0 0.1 0.068 13.2 0.1 1.5 1 1 1 2 2 2 0 Luciferase/LBP N-terminal domain Ion_trans PF00520.31 ORF23840 - 0.076 12.2 8.5 0.17 11.1 8.5 1.5 1 1 0 1 1 1 0 Ion transport protein DUF2599 PF10783.9 ORF22953 - 0.018 15.7 0.1 0.024 15.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2599) Baculo_E56 PF04639.12 ORF21160 - 0.17 11.2 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope Corona_3 PF04694.12 ORF21033 - 0.21 12.0 0.0 0.39 11.1 0.0 1.4 1 0 0 1 1 1 0 Coronavirus ORF3 protein Yip1 PF04893.17 ORF20723 - 0.0026 17.5 0.1 0.0029 17.4 0.1 1.1 1 0 0 1 1 1 1 Yip1 domain Yip1 PF04893.17 ORF20722 - 0.00013 21.8 11.6 0.00015 21.5 11.6 1.2 1 0 0 1 1 1 1 Yip1 domain UPF0640 PF15114.6 ORF20722 - 0.0092 15.8 1.0 0.013 15.2 0.4 1.7 1 1 1 2 2 2 1 Uncharacterised protein family UPF0640 PRAI PF00697.22 ORF20689 - 0.047 13.5 0.1 0.048 13.4 0.1 1.2 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Tmemb_9 PF05434.11 ORF20428 - 0.058 13.3 0.0 0.074 13.0 0.0 1.1 1 0 0 1 1 1 0 TMEM9 EamA PF00892.20 ORF20112 - 0.0021 18.2 4.0 0.0021 18.2 4.0 1.5 2 0 0 2 2 2 1 EamA-like transporter family Mg_trans_NIPA PF05653.14 ORF20112 - 0.0035 16.5 3.6 0.0035 16.5 3.6 1.0 1 0 0 1 1 1 1 Magnesium transporter NIPA Avl9 PF09794.9 ORF19887 - 1.3e-10 40.6 1.2 0.00011 21.0 0.5 2.0 1 1 1 2 2 2 2 Transport protein Avl9 SPA PF08616.10 ORF19887 - 8.8e-07 28.9 0.7 1.5e-05 24.9 0.7 2.0 1 1 0 1 1 1 1 Stabilization of polarity axis DENN PF02141.21 ORF19887 - 0.023 14.7 0.7 0.033 14.1 0.6 1.4 1 1 0 1 1 1 0 DENN (AEX-3) domain DUF5527 PF17665.1 ORF19337 - 1.5 8.4 3.8 1.6 8.3 3.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5527) Cyclin PF08613.11 ORF19335 - 8.5e-13 49.0 1.1 9.4e-13 48.8 1.1 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF19335 - 0.00015 21.5 0.4 0.00022 21.0 0.3 1.3 1 1 0 1 1 1 1 Cyclin, N-terminal domain Chordopox_E11 PF06138.12 ORF19335 - 0.029 14.7 0.1 0.035 14.4 0.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus E11 protein ASRT PF07100.11 ORF16667 - 0.025 14.6 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Anabaena sensory rhodopsin transducer BT1 PF03092.16 ORF165 - 0.0033 15.7 0.0 0.0036 15.6 0.0 1.0 1 0 0 1 1 1 1 BT1 family DUF1772 PF08592.11 ORF165 - 0.027 14.8 0.0 0.028 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) DUF1656 PF07869.12 ORF16072 - 6e-20 71.0 11.2 8e-20 70.6 11.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1656) Moulting_cycle PF04870.16 ORF16022 - 0.025 13.9 2.9 0.025 13.8 2.9 1.0 1 0 0 1 1 1 0 Moulting cycle Phage_clamp_A PF16790.5 ORF16022 - 0.064 13.7 0.1 0.07 13.6 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage clamp loader A subunit Cupin_8 PF13621.6 ORF1590 - 0.042 13.6 0.2 0.042 13.5 0.2 1.2 1 0 0 1 1 1 0 Cupin-like domain Helicase_C_4 PF13871.6 ORF15417 - 0.21 11.2 0.0 0.25 11.0 0.0 1.0 1 0 0 1 1 1 0 C-terminal domain on Strawberry notch homologue Pkinase PF00069.25 ORF13609 - 1.1e-08 34.8 0.0 1.6e-08 34.2 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13609 - 0.073 12.3 0.0 0.09 12.1 0.0 1.3 1 1 0 1 1 1 0 Protein tyrosine kinase Herpes_capsid PF06112.11 ORF13065 - 0.69 10.0 5.4 0.82 9.7 5.4 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF3306 PF11748.8 ORF13045 - 0.043 14.7 0.1 0.044 14.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3306) TOBE_3 PF12857.7 ORF11467 - 0.052 13.5 0.3 0.87 9.5 0.1 2.4 1 1 1 2 2 2 0 TOBE-like domain MFS_1 PF07690.16 ORF112533 - 0.0012 17.8 2.3 0.0014 17.7 2.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily zf-RING_UBOX PF13445.6 ORF111886 - 1.3e-07 31.6 6.0 1.3e-07 31.6 6.0 1.7 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF111886 - 1.3e-06 28.1 9.7 3.3e-06 26.9 9.7 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF111886 - 3.2e-06 27.4 12.8 3.2e-06 27.4 12.8 1.8 2 1 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF111886 - 4.6e-05 23.2 11.8 9.9e-05 22.1 11.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF111886 - 6.4e-05 22.8 9.8 0.00016 21.6 9.8 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF111886 - 0.00042 20.1 9.8 0.00058 19.7 9.0 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 ORF111886 - 0.0016 18.7 15.5 0.0016 18.7 15.5 1.4 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF111886 - 0.0028 17.8 11.4 0.0028 17.8 11.4 2.1 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_11 PF17123.5 ORF111886 - 1.2 8.9 17.2 0.28 11.0 13.5 1.9 2 1 0 2 2 2 0 RING-like zinc finger Dynein_light PF01221.18 ORF111262 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF111262 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin Sec2p PF06428.11 ORF110852 - 0.048 13.6 3.8 0.1 12.6 3.8 1.5 1 1 0 1 1 1 0 GDP/GTP exchange factor Sec2p NumbF PF06311.12 ORF110601 - 0.072 13.7 0.0 0.093 13.3 0.0 1.2 1 0 0 1 1 1 0 NUMB domain DUF4774 PF15999.5 ORF110601 - 0.12 12.2 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4774) RabGAP-TBC PF00566.18 ORF107975 - 1.8e-06 27.8 0.7 1.8e-06 27.8 0.7 1.6 2 0 0 2 2 2 1 Rab-GTPase-TBC domain DUF2374 PF09574.10 ORF107975 - 0.075 12.9 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (Duf2374) Sugar_tr PF00083.24 ORF10748 - 1.9e-09 36.9 0.0 2e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter SWIM PF04434.17 ORF107165 - 0.044 13.5 0.1 0.061 13.0 0.1 1.4 1 0 0 1 1 1 0 SWIM zinc finger DUF2963 PF11178.8 ORF107048 - 0.034 13.9 0.5 1.5 8.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2963) TMEM240 PF15207.6 ORF107048 - 2 8.1 4.6 1.1 8.9 0.5 1.9 2 0 0 2 2 2 0 TMEM240 family IPP-2 PF04979.14 ORF106782 - 4e-05 24.4 1.0 4.7e-05 24.1 1.0 1.1 1 0 0 1 1 1 1 Protein phosphatase inhibitor 2 (IPP-2) ERGIC_N PF13850.6 ORF105946 - 0.035 14.4 0.1 0.04 14.3 0.1 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) PHD_like PF12910.7 ORF105742 - 0.0015 18.5 0.2 0.0022 18.0 0.2 1.3 1 1 0 1 1 1 1 Antitoxin of toxin-antitoxin, RelE / RelB, TA system Microtub_bd PF16796.5 ORF105742 - 0.025 14.5 1.5 0.032 14.2 1.5 1.2 1 0 0 1 1 1 0 Microtubule binding DUF4407 PF14362.6 ORF105712 - 0.53 9.6 1.8 0.64 9.3 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4519 PF15012.6 ORF105712 - 4 7.7 5.3 2.1 8.6 0.9 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4519) DcuA_DcuB PF03605.14 ORF105625 - 0.41 9.5 3.6 0.42 9.5 3.6 1.0 1 0 0 1 1 1 0 Anaerobic c4-dicarboxylate membrane transporter WPP PF13943.6 ORF105410 - 0.12 12.8 0.0 0.12 12.8 0.0 1.4 1 1 0 1 1 1 0 WPP domain AAR2 PF05282.11 ORF105408 - 0.044 13.2 0.1 0.054 12.9 0.1 1.1 1 0 0 1 1 1 0 AAR2 protein Lactococcin PF04369.13 ORF104929 - 2.2 8.5 5.1 22 5.3 1.1 2.5 2 1 0 2 2 2 0 Lactococcin-like family Thioredoxin_8 PF13905.6 ORF104926 - 0.0068 16.7 0.0 0.01 16.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like Dynein_light PF01221.18 ORF104318 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF104318 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin Fimbrial PF00419.20 ORF103379 - 0.0039 17.5 0.1 0.0042 17.4 0.1 1.0 1 0 0 1 1 1 1 Fimbrial protein DUF498 PF04430.14 ORF103379 - 0.074 13.1 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) GTP_CH_N PF12471.8 ORF103379 - 0.097 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase N terminal Glutaredoxin PF00462.24 ORF102776 - 5.1e-14 52.2 0.1 6.8e-14 51.8 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 ORF102776 - 4.4e-05 23.8 0.0 5.7e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF102776 - 0.00053 20.2 0.0 0.00067 19.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF2710 PF10921.8 ORF102204 - 0.079 13.4 0.0 0.092 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2710) Arrestin_N PF00339.29 ORF102052 - 0.0017 18.4 0.0 0.002 18.2 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain MFS_1 PF07690.16 ORF101726 - 0.0011 18.0 0.0 0.0011 18.0 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF101726 - 0.0086 15.0 0.4 0.0088 15.0 0.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter K1 PF02960.14 ORF101368 - 0.067 13.3 1.9 0.093 12.8 1.9 1.2 1 0 0 1 1 1 0 K1 glycoprotein PRP4 PF08799.11 ORF101368 - 0.08 12.5 0.3 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 pre-mRNA processing factor 4 (PRP4) like IPPT PF01715.17 ORF101200 - 0.63 9.8 8.9 2 8.2 0.0 2.0 1 1 1 2 2 2 0 IPP transferase Peptidase_M16 PF00675.20 ORF101200 - 1.1 9.3 6.7 14 5.7 6.5 2.0 1 1 1 2 2 2 0 Insulinase (Peptidase family M16) OmpH PF03938.14 ORF101200 - 1.3 9.4 18.5 1.6 9.1 18.5 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) AAA_23 PF13476.6 ORF101200 - 5 7.6 20.0 6 7.3 20.0 1.0 1 0 0 1 1 1 0 AAA domain Albumin_I PF08027.11 ORF100499 - 0.045 13.4 4.9 0.09 12.4 1.5 2.3 2 0 0 2 2 2 0 Albumin I chain b DUF3611 PF12263.8 ORF100472 - 0.028 14.3 1.4 0.14 12.1 1.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3611) ShK PF01549.24 ORF100273 - 0.00016 22.1 2.1 0.00023 21.6 2.1 1.2 1 0 0 1 1 1 1 ShK domain-like Rhomboid_SP PF12595.8 NODE_61723_length_265_cov_0.921739_g53783_i0reverse_frame_1 - 0.039 13.3 0.8 0.053 12.9 0.8 1.1 1 0 0 1 1 1 0 Rhomboid serine protease UPF0492 PF15744.5 NODE_61722_length_265_cov_0.926087_g53782_i0reverse_frame_1 - 0.14 11.3 0.2 0.15 11.3 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0492 YjcB PF15940.5 NODE_61717_length_265_cov_1.060870_g53777_i0reverse_frame_1 - 0.019 15.2 2.1 0.023 14.9 2.1 1.2 1 0 0 1 1 1 0 Family of unknown function Defb50 PF17546.2 NODE_61713_length_265_cov_1.086957_g53773_i0reverse_frame_1 - 0.073 13.0 0.1 0.073 13.0 0.1 1.5 2 0 0 2 2 2 0 Beta defensin 50 ATP-synt PF00231.19 NODE_61707_length_265_cov_1.204348_g53767_i0forward_frame_1 - 1.4e-28 100.4 1.7 1.6e-28 100.3 1.7 1.0 1 0 0 1 1 1 1 ATP synthase BLOC1_2 PF10046.9 NODE_61707_length_265_cov_1.204348_g53767_i0forward_frame_1 - 0.028 14.7 0.1 0.036 14.4 0.1 1.3 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DDE_Tnp_1_4 PF13701.6 NODE_61699_length_265_cov_1.308696_g53759_i0reverse_frame_1 - 0.016 13.5 1.1 0.017 13.4 1.1 1.0 1 0 0 1 1 1 0 Transposase DDE domain group 1 PsbL PF02419.17 NODE_61699_length_265_cov_1.308696_g53759_i0forward_frame_1 - 7.3 6.7 8.3 33 4.6 0.6 3.1 3 0 0 3 3 3 0 PsbL protein CLLAC PF15675.5 NODE_61692_length_265_cov_1.378261_g53752_i0forward_frame_1 - 0.042 13.4 1.1 0.042 13.4 1.1 1.7 2 0 0 2 2 2 0 CLLAC-motif containing domain Prominin PF05478.11 NODE_61691_length_265_cov_1.382609_g53751_i0forward_frame_1 - 0.018 13.1 1.7 0.021 12.8 1.7 1.0 1 0 0 1 1 1 0 Prominin FAM216B PF15107.6 NODE_61689_length_265_cov_1.386957_g53749_i0reverse_frame_1 - 0.012 15.5 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 FAM216B protein family Sel1 PF08238.12 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 2.9e-13 50.0 1.1 1.9e-08 34.7 0.4 2.2 2 0 0 2 2 2 2 Sel1 repeat TPR_1 PF00515.28 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 4.6e-05 23.0 4.1 1.5 8.8 0.0 3.6 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.0019 18.1 0.1 0.69 10.1 0.0 2.5 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.003 17.5 2.4 12 6.3 0.1 3.4 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.012 16.2 0.3 0.096 13.4 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.017 15.2 0.2 0.79 9.8 0.1 2.5 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain TPR_8 PF13181.6 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.044 14.0 6.7 4 7.9 3.6 3.2 2 1 0 2 2 2 0 Tetratricopeptide repeat GerA PF03323.13 NODE_61683_length_265_cov_1.447826_g53743_i0reverse_frame_1 - 0.075 11.5 1.2 0.079 11.4 1.2 1.0 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein Porin_1 PF00267.21 NODE_61680_length_265_cov_1.517391_g53740_i0reverse_frame_1 - 2.8e-24 86.2 1.4 3.2e-24 86.0 1.4 1.0 1 0 0 1 1 1 1 Gram-negative porin Dabb PF07876.12 NODE_61680_length_265_cov_1.517391_g53740_i0forward_frame_1 - 0.09 13.4 0.2 0.1 13.2 0.2 1.1 1 0 0 1 1 1 0 Stress responsive A/B Barrel Domain MFS_1 PF07690.16 NODE_61679_length_265_cov_1.565217_g53739_i0reverse_frame_1 - 0.096 11.6 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily DnaJ PF00226.31 NODE_61672_length_265_cov_1.734783_g53732_i0forward_frame_1 - 7.7e-11 42.0 1.7 1e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 DnaJ domain DUF1189 PF06691.11 NODE_61669_length_265_cov_1.765217_g53729_i0forward_frame_1 - 0.0058 16.2 7.0 0.0063 16.1 7.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1189) FixQ PF05545.11 NODE_61669_length_265_cov_1.765217_g53729_i0forward_frame_1 - 2.6 8.1 5.9 3.9 7.5 5.9 1.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ SLBB PF10531.9 NODE_61666_length_265_cov_1.830435_g53726_i0reverse_frame_1 - 0.22 11.4 0.0 0.34 10.8 0.0 1.3 1 0 0 1 1 1 0 SLBB domain RTT107_BRCT_6 PF16771.5 NODE_61658_length_265_cov_1.908696_g53718_i0forward_frame_1 - 0.064 13.4 1.1 0.071 13.3 1.1 1.2 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain TBPIP PF07106.13 NODE_61649_length_265_cov_2.113043_g53709_i0reverse_frame_1 - 0.075 13.0 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain YqbF PF14553.6 NODE_61648_length_265_cov_2.204348_g53708_i0reverse_frame_1 - 0.066 13.1 0.0 0.092 12.6 0.0 1.2 1 0 0 1 1 1 0 YqbF, hypothetical protein domain HisKA PF00512.25 NODE_61647_length_265_cov_2.213043_g53707_i0reverse_frame_1 - 2.4e-08 33.9 0.3 4.9e-08 32.9 0.2 1.5 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 NODE_61647_length_265_cov_2.213043_g53707_i0reverse_frame_1 - 0.0083 16.5 0.0 0.035 14.5 0.0 2.0 2 0 0 2 2 2 1 HAMP domain DUF643 PF04867.12 NODE_61647_length_265_cov_2.213043_g53707_i0reverse_frame_1 - 0.022 15.4 0.0 0.03 14.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF643) T7SS_ESX_EspC PF10824.8 NODE_61647_length_265_cov_2.213043_g53707_i0reverse_frame_1 - 0.041 14.3 0.1 3 8.4 0.0 2.0 2 0 0 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm Peptidase_C26 PF07722.13 NODE_61645_length_265_cov_2.334783_g53705_i0forward_frame_1 - 1.5e-18 67.3 0.1 2.1e-18 66.9 0.1 1.2 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 NODE_61645_length_265_cov_2.334783_g53705_i0forward_frame_1 - 6e-05 22.9 0.0 7e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I DUF977 PF06163.11 NODE_61644_length_265_cov_2.378261_g53704_i0reverse_frame_1 - 1.1e-11 44.7 0.1 1.3e-11 44.6 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF977) CbiN PF02553.15 NODE_61644_length_265_cov_2.378261_g53704_i0forward_frame_1 - 0.14 12.1 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Cobalt transport protein component CbiN GerD PF17898.1 NODE_61638_length_265_cov_2.547826_g53698_i0reverse_frame_1 - 0.012 15.5 1.5 0.014 15.3 1.5 1.1 1 0 0 1 1 1 0 Spore germination GerD central core domain Peptidase_M24 PF00557.24 NODE_61633_length_265_cov_2.613043_g53693_i0reverse_frame_1 - 0.0052 16.5 0.0 0.0065 16.2 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 TPP_enzyme_N PF02776.18 NODE_61628_length_265_cov_2.713043_g53688_i0reverse_frame_1 - 1.2e-16 60.8 0.1 1.4e-16 60.6 0.1 1.0 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks267.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks267.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks267.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks267.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:12:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RPAP3_C PF13877.6 NODE_61624_length_265_cov_2.908696_g53684_i0forward_frame_1 - 0.043 14.4 0.1 0.058 13.9 0.1 1.3 1 0 0 1 1 1 0 Potential Monad-binding region of RPAP3 Glyco_transf_9 PF01075.17 NODE_61621_length_265_cov_3.421739_g53681_i0forward_frame_1 - 2.1e-07 30.5 0.0 2.3e-07 30.4 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) DUF5580 PF17743.1 NODE_61621_length_265_cov_3.421739_g53681_i0forward_frame_1 - 0.19 10.2 0.0 0.23 9.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5580) DUF3969 PF13108.6 NODE_61619_length_265_cov_3.991304_g53679_i0reverse_frame_1 - 0.057 13.4 0.0 0.074 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3969) zf-C2H2 PF00096.26 NODE_61617_length_265_cov_4.230435_g53677_i0forward_frame_1 - 1.3e-06 28.5 4.2 0.0029 18.0 0.4 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_aberr PF17017.5 NODE_61617_length_265_cov_4.230435_g53677_i0forward_frame_1 - 0.0058 16.8 1.1 0.0062 16.7 0.4 1.5 1 1 0 1 1 1 1 Aberrant zinc-finger zf-C2H2_4 PF13894.6 NODE_61617_length_265_cov_4.230435_g53677_i0forward_frame_1 - 0.0079 16.9 4.1 0.19 12.7 0.3 2.5 2 0 0 2 2 2 2 C2H2-type zinc finger FOXP-CC PF16159.5 NODE_61617_length_265_cov_4.230435_g53677_i0forward_frame_1 - 0.048 14.3 1.7 0.087 13.5 1.6 1.6 1 1 0 1 1 1 0 FOXP coiled-coil domain Exo_endo_phos PF03372.23 NODE_61616_length_265_cov_4.513043_g53676_i0forward_frame_1 - 0.0096 15.5 0.0 0.0096 15.5 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_61616_length_265_cov_4.513043_g53676_i0forward_frame_1 - 0.12 12.2 0.0 0.16 11.8 0.0 1.3 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase Cas_Csx8 PF09657.10 NODE_61604_length_265_cov_39.743478_g53664_i0forward_frame_1 - 0.0099 14.9 3.4 0.011 14.8 3.4 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Csx8 (Cas_Csx8) DUF5305 PF17231.2 NODE_61604_length_265_cov_39.743478_g53664_i0forward_frame_1 - 0.036 13.5 0.4 0.039 13.4 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) OAD_gamma PF04277.13 NODE_61604_length_265_cov_39.743478_g53664_i0forward_frame_1 - 0.36 11.4 2.8 0.67 10.6 2.8 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain PRIMA1 PF16101.5 NODE_61602_length_265_cov_44.173913_g53662_i0forward_frame_1 - 0.078 13.0 1.5 0.095 12.7 1.5 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_61602_length_265_cov_44.173913_g53662_i0forward_frame_1 - 0.082 12.4 0.3 0.093 12.2 0.3 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Glycophorin_A PF01102.18 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.001 19.3 0.0 0.0011 19.1 0.0 1.1 1 0 0 1 1 1 1 Glycophorin A VSP PF03302.13 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.0046 15.9 0.4 0.0047 15.8 0.4 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein Mucin15 PF15672.5 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.0053 16.3 0.2 0.0064 16.0 0.2 1.1 1 0 0 1 1 1 1 Cell-membrane associated Mucin15 CD99L2 PF12301.8 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.016 15.5 0.1 0.017 15.4 0.1 1.1 1 0 0 1 1 1 0 CD99 antigen like protein 2 Amnionless PF14828.6 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.038 12.8 0.0 0.038 12.8 0.0 1.0 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.099 13.3 0.1 0.13 12.9 0.1 1.2 1 0 0 1 1 1 0 Small Novel Rich in Cartilage Cnn_1N PF07989.11 NODE_61586_length_265_cov_85.526087_g53646_i0reverse_frame_1 - 0.1 12.7 0.0 0.26 11.5 0.0 1.6 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 Leu_Phe_trans PF03588.14 NODE_61582_length_265_cov_91.065217_g53642_i0forward_frame_1 - 0.024 14.1 0.3 0.024 14.1 0.3 1.0 1 0 0 1 1 1 0 Leucyl/phenylalanyl-tRNA protein transferase FixS PF03597.15 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.0028 17.3 0.0 0.0044 16.7 0.0 1.3 1 0 0 1 1 1 1 Cytochrome oxidase maturation protein cbb3-type MAP17 PF15807.5 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.012 15.8 0.0 0.015 15.6 0.0 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF3976 PF13121.6 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.029 14.5 0.5 0.049 13.7 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3976) 7TM_GPCR_Srd PF10317.9 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.031 13.5 0.0 0.038 13.2 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd DUF3341 PF11821.8 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.31 10.6 1.1 0.7 9.5 0.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3341) FixS PF03597.15 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.021 14.5 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type DUF3976 PF13121.6 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.037 14.1 1.7 0.066 13.3 1.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3976) MAP17 PF15807.5 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.043 14.0 0.0 0.051 13.8 0.0 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 7TM_GPCR_Srd PF10317.9 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.062 12.5 0.0 0.075 12.2 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd Transport_MerF PF11431.8 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.17 11.8 0.7 0.59 10.0 0.1 2.1 2 1 0 2 2 2 0 Membrane transport protein MerF bMG1 PF17970.1 NODE_61565_length_265_cov_532.282609_g53625_i0reverse_frame_1 - 0.082 13.0 0.0 0.098 12.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG1 domain Tubulin_2 PF13809.6 NODE_61557_length_266_cov_0.974026_g53617_i0forward_frame_1 - 0.18 10.9 0.0 0.24 10.5 0.0 1.1 1 0 0 1 1 1 0 Tubulin like DUF1161 PF06649.12 NODE_61549_length_266_cov_1.255411_g53609_i0forward_frame_1 - 0.059 13.6 0.1 0.083 13.1 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1161) Pkinase PF00069.25 NODE_61539_length_266_cov_1.393939_g53599_i0forward_frame_1 - 7e-24 84.6 1.7 7.3e-24 84.5 1.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_61539_length_266_cov_1.393939_g53599_i0forward_frame_1 - 3.1e-18 66.0 0.5 3.2e-18 65.9 0.5 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase LEF-8 PF04941.12 NODE_61539_length_266_cov_1.393939_g53599_i0forward_frame_1 - 0.025 12.8 0.1 0.028 12.7 0.1 1.0 1 0 0 1 1 1 0 Late expression factor 8 (LEF-8) FTA2 PF13095.6 NODE_61539_length_266_cov_1.393939_g53599_i0forward_frame_1 - 0.067 12.8 0.0 0.082 12.5 0.0 1.3 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 MCM PF00493.23 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 9e-41 139.4 0.4 9.6e-41 139.3 0.4 1.0 1 0 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 7.8e-09 35.2 0.0 9.5e-09 34.9 0.0 1.0 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 0.00027 20.7 0.0 0.0003 20.5 0.0 1.0 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_3 PF07726.11 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 0.00083 19.2 0.0 0.00084 19.2 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 0.075 13.0 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DEAD PF00270.29 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase Crl PF07417.12 NODE_61531_length_266_cov_1.528139_g53591_i0reverse_frame_1 - 0.095 12.8 0.7 0.12 12.5 0.1 1.5 2 0 0 2 2 2 0 Sigma factor-binding transcriptional regulator Crl Orf78 PF06024.12 NODE_61523_length_266_cov_1.670996_g53583_i0forward_frame_1 - 0.014 15.7 0.1 0.016 15.5 0.1 1.1 1 0 0 1 1 1 0 Orf78 (ac78) C8 PF08742.11 NODE_61516_length_266_cov_1.761905_g53576_i0forward_frame_1 - 0.022 15.1 0.2 0.031 14.7 0.2 1.2 1 0 0 1 1 1 0 C8 domain KcnmB2_inactiv PF09303.10 NODE_61515_length_266_cov_1.774892_g53575_i0reverse_frame_1 - 0.052 13.3 0.5 0.099 12.5 0.5 1.4 1 0 0 1 1 1 0 KCNMB2, ball and chain domain E1-N PF14463.6 NODE_61514_length_266_cov_1.787879_g53574_i0forward_frame_1 - 0.011 15.5 0.1 0.012 15.4 0.1 1.2 1 0 0 1 1 1 0 E1 N-terminal domain DUF35_N PF12172.8 NODE_61512_length_266_cov_1.848485_g53572_i0forward_frame_1 - 0.87 9.5 5.2 0.49 10.3 2.0 2.0 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Mistic PF11458.8 NODE_61510_length_266_cov_1.904762_g53570_i0forward_frame_1 - 0.12 12.4 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Membrane-integrating protein Mistic DUF3271 PF11675.8 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.004 16.4 0.9 0.0048 16.2 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3271) GnsAB_toxin PF08178.11 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.0041 17.0 3.2 0.009 15.9 3.2 1.6 1 1 0 1 1 1 1 GnsA/GnsB toxin of bacterial toxin-antitoxin system RRF PF01765.19 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.0049 16.8 3.1 0.0049 16.8 3.1 1.5 1 1 0 1 1 1 1 Ribosome recycling factor T3SSipB PF16535.5 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.012 16.1 2.5 0.013 16.0 2.5 1.2 1 0 0 1 1 1 0 Type III cell invasion protein SipB DUF2115 PF09888.9 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.047 14.2 1.2 0.054 14.0 1.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) eIF-4B PF06273.11 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 2.1 7.3 4.9 2.2 7.2 4.9 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B ASFV_J13L PF05568.11 NODE_61502_length_266_cov_2.073593_g53562_i0reverse_frame_1 - 0.22 11.2 0.7 0.27 10.9 0.7 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein TED_complement PF07678.14 NODE_61486_length_266_cov_2.329004_g53546_i0forward_frame_1 - 0.031 13.3 0.2 0.035 13.1 0.2 1.0 1 0 0 1 1 1 0 A-macroglobulin TED domain Sec39 PF08314.11 NODE_61480_length_266_cov_2.480519_g53540_i0reverse_frame_1 - 0.034 12.6 0.3 0.037 12.5 0.3 1.0 1 0 0 1 1 1 0 Secretory pathway protein Sec39 Exc PF07825.11 NODE_61478_length_266_cov_2.567100_g53538_i0forward_frame_1 - 0.05 13.6 0.0 2.5 8.1 0.0 2.1 2 0 0 2 2 2 0 Excisionase-like protein DUF3963 PF13124.6 NODE_61476_length_266_cov_2.640693_g53536_i0forward_frame_1 - 0.12 12.4 0.3 0.2 11.7 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3963) TxDE PF18711.1 NODE_61473_length_266_cov_2.822511_g53533_i0reverse_frame_1 - 0.029 14.5 0.0 8.7 6.5 0.0 2.2 2 0 0 2 2 2 0 Toxoflavin-degrading enzyme DUF1899 PF08953.11 NODE_61473_length_266_cov_2.822511_g53533_i0reverse_frame_1 - 0.18 11.7 0.0 0.94 9.4 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1899) CHD5 PF04420.14 NODE_61470_length_266_cov_2.891775_g53530_i0forward_frame_1 - 0.049 13.5 3.3 0.058 13.2 3.3 1.1 1 0 0 1 1 1 0 CHD5-like protein 7TM_GPCR_Sra PF02117.16 NODE_61468_length_266_cov_2.969697_g53528_i0forward_frame_1 - 0.016 14.1 4.5 0.019 13.8 4.5 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sra DMT_YdcZ PF04657.13 NODE_61466_length_266_cov_3.251082_g53526_i0forward_frame_1 - 0.043 14.1 0.2 0.053 13.8 0.2 1.1 1 0 0 1 1 1 0 Putative inner membrane exporter, YdcZ EF-hand_7 PF13499.6 NODE_61462_length_266_cov_3.939394_g53522_i0reverse_frame_1 - 0.00013 22.4 0.4 0.00018 21.9 0.4 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_61462_length_266_cov_3.939394_g53522_i0reverse_frame_1 - 0.0003 20.6 0.0 0.00042 20.1 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_61462_length_266_cov_3.939394_g53522_i0reverse_frame_1 - 0.00042 19.7 0.1 0.0085 15.6 0.0 2.5 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 NODE_61462_length_266_cov_3.939394_g53522_i0reverse_frame_1 - 0.0052 16.6 0.2 5.3 7.2 0.0 2.5 2 1 0 2 2 2 2 EF-hand domain Gamma_PGA_hydro PF05908.11 NODE_61461_length_266_cov_4.203463_g53521_i0forward_frame_1 - 0.041 13.3 3.0 0.047 13.1 3.0 1.1 1 0 0 1 1 1 0 Poly-gamma-glutamate hydrolase Periviscerokin PF08259.11 NODE_61460_length_266_cov_4.580087_g53520_i0forward_frame_1 - 1.9 9.0 5.3 1e+02 3.7 0.4 3.7 3 0 0 3 3 3 0 Periviscerokinin family SHIPPO-rpt PF07004.12 NODE_61453_length_266_cov_34.995671_g53513_i0reverse_frame_1 - 0.00038 21.2 0.2 0.48 11.4 0.0 2.4 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat DUF3662 PF12401.8 NODE_61453_length_266_cov_34.995671_g53513_i0reverse_frame_1 - 0.043 14.2 0.0 0.053 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2662) DUF3969 PF13108.6 NODE_61443_length_266_cov_55.636364_g53503_i0reverse_frame_1 - 0.028 14.4 0.1 0.04 13.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3969) DUF4985 PF16373.5 NODE_61440_length_266_cov_57.562771_g53500_i0reverse_frame_1 - 0.022 15.2 0.0 0.029 14.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function Matrilin_ccoil PF10393.9 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.029 14.2 1.9 0.13 12.1 0.2 2.7 3 1 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin Sec20 PF03908.13 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.056 13.4 3.1 0.073 13.0 3.1 1.2 1 0 0 1 1 1 0 Sec20 TMPIT PF07851.13 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.18 11.0 4.4 0.2 10.8 4.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein Laminin_II PF06009.12 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.28 11.2 6.3 0.35 10.9 6.3 1.1 1 0 0 1 1 1 0 Laminin Domain II DUF1690 PF07956.11 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.5 10.8 8.0 0.82 10.1 8.0 1.3 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF4446 PF14584.6 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 1.3 9.0 7.1 1.2 9.2 4.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) HIPIP PF01355.17 NODE_61435_length_266_cov_61.558442_g53495_i0forward_frame_1 - 0.42 11.0 3.7 0.37 11.2 1.1 2.2 1 1 1 2 2 2 0 High potential iron-sulfur protein RNase_P_Rpp14 PF01900.19 NODE_61434_length_266_cov_62.129870_g53494_i0reverse_frame_1 - 0.13 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Rpp14/Pop5 family UBA_e1_thiolCys PF10585.9 NODE_61430_length_266_cov_65.359307_g53490_i0forward_frame_1 - 9.1e-07 29.0 0.0 1.3e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-activating enzyme active site ThiF PF00899.21 NODE_61430_length_266_cov_65.359307_g53490_i0forward_frame_1 - 3.2e-05 23.4 0.0 3.2e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 ThiF family PAS_4 PF08448.10 NODE_61429_length_266_cov_65.619048_g53489_i0forward_frame_1 - 0.036 14.3 0.0 0.042 14.1 0.0 1.0 1 0 0 1 1 1 0 PAS fold DUF4250 PF14056.6 NODE_61424_length_266_cov_76.818182_g53484_i0reverse_frame_1 - 0.029 14.3 0.1 0.038 13.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) RF3_C PF16658.5 NODE_61424_length_266_cov_76.818182_g53484_i0reverse_frame_1 - 0.081 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain OmpH PF03938.14 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.0007 19.9 5.3 0.00085 19.7 5.3 1.1 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) DUF1759 PF03564.15 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.004 17.1 2.9 0.0044 17.0 2.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) TssO PF17561.2 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.0055 16.8 6.5 0.0061 16.7 6.5 1.0 1 0 0 1 1 1 1 Type VI secretion system, TssO Prominin PF05478.11 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.0058 14.7 3.0 0.0056 14.7 3.0 1.0 1 0 0 1 1 1 1 Prominin Ras PF00071.22 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.0096 15.5 0.2 0.011 15.4 0.2 1.1 1 0 0 1 1 1 1 Ras family AAA_32 PF13654.6 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.023 13.5 3.5 0.026 13.3 3.5 1.0 1 0 0 1 1 1 0 AAA domain FAM76 PF16046.5 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.026 13.9 3.4 0.032 13.6 3.4 1.1 1 0 0 1 1 1 0 FAM76 protein CLZ PF16526.5 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.039 14.3 4.9 0.054 13.8 4.5 1.6 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Ly49 PF08391.10 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.059 13.7 4.3 0.072 13.5 4.3 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region CH_2 PF06294.11 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.083 13.0 2.3 0.21 11.8 2.3 1.7 1 1 0 1 1 1 0 CH-like domain in sperm protein Osmo_CC PF08946.10 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.13 12.6 3.4 0.39 11.0 3.4 1.8 1 1 0 1 1 1 0 Osmosensory transporter coiled coil DUF2175 PF09943.9 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.5 10.7 4.4 0.64 10.3 4.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) Nore1-SARAH PF16517.5 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.51 10.3 3.8 1.7 8.6 1.7 2.5 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Peptidase_U4 PF03419.13 NODE_61413_length_266_cov_100.601732_g53473_i0forward_frame_1 - 0.64 9.2 5.3 0.66 9.2 5.3 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA DUF4727 PF15856.5 NODE_61406_length_266_cov_146.190476_g53466_i0reverse_frame_1 - 0.066 12.8 0.6 0.074 12.6 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4727) DUF4604 PF15377.6 NODE_61398_length_266_cov_182.229437_g53458_i0reverse_frame_1 - 0.097 13.1 8.3 0.11 12.9 8.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) Tetraspanin PF00335.20 NODE_61398_length_266_cov_182.229437_g53458_i0forward_frame_1 - 3.5 7.3 8.8 3.3 7.3 7.0 1.7 2 0 0 2 2 2 0 Tetraspanin family Phage_holin_3_6 PF07332.11 NODE_61398_length_266_cov_182.229437_g53458_i0forward_frame_1 - 3.8 7.6 10.4 7.2 6.7 10.4 1.6 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III BLF1 PF17752.1 NODE_61393_length_266_cov_275.415584_g53453_i0reverse_frame_1 - 0.061 12.6 0.0 0.061 12.6 0.0 1.1 1 0 0 1 1 1 0 Burkholderia lethal factor 1 RimM PF01782.18 NODE_61386_length_266_cov_644.406926_g53446_i0reverse_frame_1 - 0.077 13.2 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 RimM N-terminal domain Carb_anhydrase PF00194.21 NODE_61381_length_266_cov_1646.593074_g53441_i0forward_frame_1 - 4.8e-09 36.1 0.6 5.3e-09 36.0 0.6 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase HSP70 PF00012.20 NODE_61378_length_266_cov_7097.112554_g53438_i0reverse_frame_1 - 1.9e-22 79.2 2.4 2e-22 79.1 2.4 1.0 1 0 0 1 1 1 1 Hsp70 protein DIOX_N PF14226.6 NODE_61378_length_266_cov_7097.112554_g53438_i0reverse_frame_1 - 0.059 14.1 0.3 0.066 14.0 0.3 1.1 1 0 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal SHS2_FTSA PF02491.20 NODE_61378_length_266_cov_7097.112554_g53438_i0reverse_frame_1 - 0.13 12.7 0.3 0.18 12.2 0.3 1.3 1 0 0 1 1 1 0 SHS2 domain inserted in FTSA HSP70 PF00012.20 NODE_61377_length_266_cov_10132.147186_g53437_i0reverse_frame_1 - 1.9e-22 79.2 2.4 2e-22 79.1 2.4 1.0 1 0 0 1 1 1 1 Hsp70 protein DIOX_N PF14226.6 NODE_61377_length_266_cov_10132.147186_g53437_i0reverse_frame_1 - 0.059 14.1 0.3 0.066 14.0 0.3 1.1 1 0 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal SHS2_FTSA PF02491.20 NODE_61377_length_266_cov_10132.147186_g53437_i0reverse_frame_1 - 0.13 12.7 0.3 0.18 12.2 0.3 1.3 1 0 0 1 1 1 0 SHS2 domain inserted in FTSA Tenui_NCP PF04876.12 NODE_61368_length_267_cov_1.034483_g53428_i0reverse_frame_1 - 0.046 13.3 0.1 0.049 13.2 0.1 1.0 1 0 0 1 1 1 0 Tenuivirus major non-capsid protein Fer4_24 PF18109.1 NODE_61366_length_267_cov_1.077586_g53426_i0reverse_frame_1 - 0.047 14.0 2.5 0.086 13.1 2.5 1.4 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain PPR_2 PF13041.6 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 2.8e-16 59.4 0.0 3e-09 36.9 0.0 2.7 1 1 2 3 3 3 3 PPR repeat family PPR PF01535.20 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 7.2e-14 51.0 0.0 2.5e-05 24.2 0.0 3.0 3 0 0 3 3 3 2 PPR repeat PPR_3 PF13812.6 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 3.9e-09 36.5 0.0 0.0006 19.8 0.0 2.0 1 1 0 2 2 2 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 3.2e-08 33.1 0.0 0.00022 20.8 0.0 3.3 4 0 0 4 4 4 2 PPR repeat TPR_14 PF13428.6 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 0.0089 16.8 0.6 1.3 10.1 0.1 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat UPF0227 PF05728.12 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 0.0095 15.9 0.0 0.01 15.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) PPR_long PF17177.4 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 0.04 13.3 0.0 0.11 11.8 0.0 1.5 1 1 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP FAD_binding_1 PF00667.20 NODE_61356_length_267_cov_1.383621_g53416_i0forward_frame_1 - 1.2e-14 54.5 0.0 1.3e-14 54.3 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain DUF5549 PF17703.1 NODE_61354_length_267_cov_1.452586_g53414_i0reverse_frame_1 - 0.044 13.4 1.0 0.049 13.3 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) Corona_NS2 PF04753.12 NODE_61353_length_267_cov_1.491379_g53413_i0reverse_frame_1 - 0.11 13.1 0.0 0.14 12.8 0.0 1.2 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 SNAD4 PF18750.1 NODE_61349_length_267_cov_1.564655_g53409_i0forward_frame_1 - 0.092 12.9 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 NAD1 PF18778.1 NODE_61349_length_267_cov_1.564655_g53409_i0forward_frame_1 - 0.14 12.2 0.5 0.3 11.1 0.2 1.6 1 1 1 2 2 2 0 Novel AID APOBEC clade 1 MORN PF02493.20 NODE_61342_length_267_cov_1.724138_g53402_i0forward_frame_1 - 0.08 12.9 3.2 2 8.5 0.4 2.8 3 0 0 3 3 3 0 MORN repeat FYVE PF01363.21 NODE_61341_length_267_cov_1.771552_g53401_i0forward_frame_1 - 0.11 12.7 2.7 0.15 12.2 2.7 1.2 1 0 0 1 1 1 0 FYVE zinc finger TraS PF10624.9 NODE_61340_length_267_cov_1.771552_g53400_i0forward_frame_1 - 0.0052 16.7 1.7 0.0059 16.6 1.7 1.2 1 0 0 1 1 1 1 Plasmid conjugative transfer entry exclusion protein TraS Glyco_transf_20 PF00982.21 NODE_61339_length_267_cov_1.793103_g53399_i0reverse_frame_1 - 1.7e-34 119.3 1.9 1.8e-34 119.2 1.9 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 DUF2947 PF11163.8 NODE_61339_length_267_cov_1.793103_g53399_i0forward_frame_1 - 0.11 12.3 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2947) APS_kinase PF01583.20 NODE_61325_length_267_cov_1.969828_g53385_i0reverse_frame_1 - 1e-15 58.0 0.0 1.1e-15 57.9 0.0 1.1 1 0 0 1 1 1 1 Adenylylsulphate kinase Radial_spoke_3 PF06098.11 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 0.16 11.2 11.0 0.2 10.9 11.0 1.0 1 0 0 1 1 1 0 Radial spoke protein 3 Dis3l2_C_term PF17877.1 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 0.29 11.5 4.0 0.41 11.0 4.0 1.2 1 0 0 1 1 1 0 DIS3-like exonuclease 2 C terminal Ureide_permease PF07168.11 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 1.5 7.5 3.3 1.4 7.6 3.3 1.1 1 0 0 1 1 1 0 Ureide permease MscS_TM PF12794.7 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 1.7 7.4 3.0 1.8 7.4 3.0 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 EMC3_TMCO1 PF01956.16 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 1.9 8.2 7.7 2.1 8.1 7.7 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like 60KD_IMP PF02096.20 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 6.4 6.6 7.9 7.6 6.4 7.9 1.1 1 0 0 1 1 1 0 60Kd inner membrane protein TetR_C_8 PF14278.6 NODE_61322_length_267_cov_2.017241_g53382_i0reverse_frame_1 - 0.051 13.7 0.4 0.062 13.4 0.4 1.1 1 0 0 1 1 1 0 Transcriptional regulator C-terminal region ZinT PF09223.11 NODE_61320_length_267_cov_2.030172_g53380_i0reverse_frame_1 - 5.4e-43 147.0 0.5 5.9e-43 146.9 0.5 1.0 1 0 0 1 1 1 1 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment Saw1 PF11561.8 NODE_61320_length_267_cov_2.030172_g53380_i0reverse_frame_1 - 0.025 14.1 0.0 0.029 13.9 0.0 1.0 1 0 0 1 1 1 0 Single strand annealing-weakened 1 AFOR_N PF02730.15 NODE_61317_length_267_cov_2.077586_g53377_i0reverse_frame_1 - 4.2e-26 92.1 0.1 4.5e-26 91.9 0.1 1.0 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain COX14 PF14880.6 NODE_61311_length_267_cov_2.176724_g53371_i0reverse_frame_1 - 0.027 14.3 0.7 0.045 13.6 0.7 1.3 1 0 0 1 1 1 0 Cytochrome oxidase c assembly RNase_H PF00075.24 NODE_61306_length_267_cov_2.327586_g53366_i0reverse_frame_1 - 9.6e-15 55.0 0.7 1.2e-14 54.7 0.7 1.1 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.6 NODE_61306_length_267_cov_2.327586_g53366_i0reverse_frame_1 - 6e-08 32.5 0.7 7e-08 32.3 0.7 1.1 1 0 0 1 1 1 1 Reverse transcriptase-like FlpD PF02662.16 NODE_61306_length_267_cov_2.327586_g53366_i0reverse_frame_1 - 0.045 13.8 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit LptF_LptG PF03739.14 NODE_61305_length_267_cov_2.383621_g53365_i0forward_frame_1 - 0.087 11.7 1.1 0.12 11.2 1.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG DUF3984 PF13136.6 NODE_61302_length_267_cov_2.461207_g53362_i0forward_frame_1 - 0.1 12.0 0.6 0.14 11.5 0.4 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3984) DUF3966 PF13110.6 NODE_61290_length_267_cov_2.887931_g53350_i0reverse_frame_1 - 0.032 14.2 0.6 0.059 13.3 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3966) DUF4590 PF15257.6 NODE_61286_length_267_cov_3.512931_g53346_i0reverse_frame_1 - 0.13 12.2 0.4 0.2 11.6 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4590) Enolase_C PF00113.22 NODE_61281_length_267_cov_4.534483_g53341_i0reverse_frame_1 - 4.8e-32 111.4 0.4 5.1e-32 111.3 0.4 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Peptidase_S49_N PF08496.10 NODE_61276_length_267_cov_5.512931_g53336_i0reverse_frame_1 - 0.012 15.7 2.6 0.015 15.4 2.6 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal MutH PF02976.15 NODE_61271_length_267_cov_19.870690_g53331_i0reverse_frame_1 - 0.0055 16.7 0.6 0.0065 16.5 0.6 1.1 1 0 0 1 1 1 1 DNA mismatch repair enzyme MutH PMC2NT PF08066.12 NODE_61271_length_267_cov_19.870690_g53331_i0reverse_frame_1 - 0.016 15.8 0.1 0.078 13.7 0.0 1.9 1 1 1 2 2 2 0 PMC2NT (NUC016) domain Toxin_YhaV PF11663.8 NODE_61271_length_267_cov_19.870690_g53331_i0reverse_frame_1 - 0.053 13.6 0.8 0.066 13.3 0.8 1.1 1 0 0 1 1 1 0 Toxin with endonuclease activity, of toxin-antitoxin system PABP PF00658.18 NODE_61267_length_267_cov_51.814655_g53327_i0reverse_frame_1 - 1.2e-09 38.2 0.1 1.4e-09 37.9 0.1 1.1 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain RRM_1 PF00076.22 NODE_61266_length_267_cov_54.590517_g53326_i0forward_frame_1 - 0.0024 17.7 0.4 0.004 16.9 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glycoprot_B_PH1 PF17416.2 NODE_61266_length_267_cov_54.590517_g53326_i0forward_frame_1 - 0.0085 15.7 0.0 0.0085 15.7 0.0 1.1 1 0 0 1 1 1 1 Herpesvirus Glycoprotein B SNF2_N PF00176.23 NODE_61266_length_267_cov_54.590517_g53326_i0forward_frame_1 - 0.29 9.8 3.5 0.3 9.7 3.5 1.1 1 0 0 1 1 1 0 SNF2 family N-terminal domain DUF1385 PF07136.11 NODE_61262_length_267_cov_61.905172_g53322_i0forward_frame_1 - 0.036 13.3 0.8 0.043 13.1 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) CD52 PF15116.6 NODE_61262_length_267_cov_61.905172_g53322_i0forward_frame_1 - 0.31 11.1 1.0 0.61 10.2 1.0 1.4 1 0 0 1 1 1 0 CAMPATH-1 antigen DUF4579 PF15158.6 NODE_61257_length_267_cov_66.202586_g53317_i0forward_frame_1 - 0.0066 16.2 0.2 0.0076 16.0 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4579) Proton_antipo_C PF01010.19 NODE_61257_length_267_cov_66.202586_g53317_i0forward_frame_1 - 0.084 12.5 2.7 0.098 12.3 2.7 1.1 1 0 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus MKT1_C PF12246.8 NODE_61245_length_267_cov_90.517241_g53305_i0reverse_frame_1 - 0.15 11.3 0.1 0.16 11.2 0.1 1.1 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication DUF5605 PF18310.1 NODE_61241_length_267_cov_105.762931_g53301_i0forward_frame_1 - 0.028 14.3 0.1 0.049 13.5 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5605) MCPVI PF02993.14 NODE_61241_length_267_cov_105.762931_g53301_i0forward_frame_1 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Minor capsid protein VI RecG_N PF17190.4 NODE_61232_length_267_cov_152.418103_g53292_i0reverse_frame_1 - 0.05 14.3 1.0 0.068 13.9 1.0 1.2 1 0 0 1 1 1 0 RecG N-terminal helical domain zf-CDGSH PF09360.10 NODE_61229_length_267_cov_176.094828_g53289_i0forward_frame_1 - 0.085 13.1 0.2 0.085 13.1 0.2 1.8 2 0 0 2 2 2 0 Iron-binding zinc finger CDGSH type Trehalose_PPase PF02358.16 NODE_61226_length_267_cov_274.706897_g53286_i0reverse_frame_1 - 0.087 11.9 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase zf-Dof PF02701.15 NODE_61226_length_267_cov_274.706897_g53286_i0forward_frame_1 - 0.066 13.4 1.9 0.11 12.7 0.1 1.9 2 0 0 2 2 2 0 Dof domain, zinc finger Glyco_hydro_38N PF01074.22 NODE_61219_length_267_cov_835.146552_g53279_i0forward_frame_1 - 1.1e-09 38.1 0.7 1.1e-09 38.1 0.7 1.8 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain COX7a PF02238.15 NODE_61219_length_267_cov_835.146552_g53279_i0forward_frame_1 - 0.0065 16.8 0.3 0.02 15.3 0.1 1.9 1 1 1 2 2 2 1 Cytochrome c oxidase subunit VII MANEC PF07502.14 NODE_61213_length_268_cov_1.000000_g53273_i0forward_frame_3 - 0.0033 17.7 1.7 0.0037 17.5 1.7 1.2 1 0 0 1 1 1 1 MANEC domain PAN_4 PF14295.6 NODE_61213_length_268_cov_1.000000_g53273_i0forward_frame_3 - 0.063 13.2 6.8 0.12 12.3 6.8 1.6 1 1 0 1 1 1 0 PAN domain Peptidase_C39_2 PF13529.6 NODE_61209_length_268_cov_1.145923_g53269_i0forward_frame_2 - 0.048 14.2 0.5 0.057 14.0 0.5 1.1 1 0 0 1 1 1 0 Peptidase_C39 like family DUF4507 PF14964.6 NODE_61203_length_268_cov_1.214592_g53263_i0reverse_frame_2 - 0.25 10.2 0.0 0.3 10.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4507) Coleoptericin PF06286.11 NODE_61203_length_268_cov_1.214592_g53263_i0forward_frame_2 - 0.15 12.2 0.1 0.18 11.9 0.1 1.1 1 0 0 1 1 1 0 Coleoptericin Pre-PUA PF17832.1 NODE_61200_length_268_cov_1.283262_g53260_i0reverse_frame_3 - 0.083 13.6 0.1 0.1 13.3 0.1 1.1 1 0 0 1 1 1 0 Pre-PUA-like domain AUDH_Cupin PF18637.1 NODE_61199_length_268_cov_1.296137_g53259_i0forward_frame_3 - 0.15 12.0 0.8 0.15 12.0 0.5 1.3 1 1 0 1 1 1 0 Aldos-2-ulose dehydratase/isomerase (AUDH) Cupin domain BASP1 PF05466.12 NODE_61195_length_268_cov_1.467811_g53255_i0forward_frame_2 - 2.5 8.0 8.7 2.9 7.9 8.7 1.1 1 0 0 1 1 1 0 Brain acid soluble protein 1 (BASP1 protein) Tfb2 PF03849.14 NODE_61194_length_268_cov_1.480687_g53254_i0reverse_frame_3 - 0.082 11.9 0.0 0.089 11.7 0.0 1.0 1 0 0 1 1 1 0 Transcription factor Tfb2 Aldo_ket_red PF00248.21 NODE_61194_length_268_cov_1.480687_g53254_i0reverse_frame_2 - 6.6e-08 32.1 0.0 1.3e-07 31.1 0.0 1.5 1 1 0 1 1 1 1 Aldo/keto reductase family DUF240 PF03086.14 NODE_61191_length_268_cov_1.497854_g53251_i0reverse_frame_2 - 0.031 14.2 2.5 0.034 14.1 2.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF240) LEA_6 PF10714.9 NODE_61190_length_268_cov_1.510730_g53250_i0reverse_frame_3 - 0.22 11.6 8.1 6.6 6.9 1.1 2.8 1 1 2 3 3 3 0 Late embryogenesis abundant protein 18 DUF5090 PF17009.5 NODE_61190_length_268_cov_1.510730_g53250_i0forward_frame_3 - 7.2 6.5 11.6 3.2 7.7 8.8 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5090) NusB PF01029.18 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.028 14.6 2.2 0.028 14.6 2.2 1.3 1 1 0 1 1 1 0 NusB family OPA3 PF07047.12 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.034 13.9 0.2 0.043 13.6 0.2 1.1 1 0 0 1 1 1 0 Optic atrophy 3 protein (OPA3) MIT_C PF16565.5 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.076 13.0 1.3 0.11 12.5 0.9 1.4 1 1 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT Selenoprotein_S PF06936.11 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.082 12.7 3.4 0.099 12.4 3.4 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) TMPIT PF07851.13 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.7 9.1 6.8 0.79 8.9 6.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein GET2 PF08690.10 NODE_61181_length_268_cov_1.622318_g53241_i0reverse_frame_3 - 0.056 13.1 0.4 0.053 13.2 0.4 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 PAP2 PF01569.21 NODE_61177_length_268_cov_1.708155_g53237_i0forward_frame_3 - 0.029 14.1 0.4 0.078 12.8 0.0 1.7 1 1 1 2 2 2 0 PAP2 superfamily APT PF03440.14 NODE_61176_length_268_cov_1.716738_g53236_i0forward_frame_3 - 0.009 16.0 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Aerolysin/Pertussis toxin (APT) domain TRAM1 PF08390.11 NODE_61176_length_268_cov_1.716738_g53236_i0forward_frame_3 - 0.46 10.2 3.6 0.87 9.3 2.4 2.1 2 1 0 2 2 2 0 TRAM1-like protein Spindle_Spc25 PF08234.12 NODE_61174_length_268_cov_1.798283_g53234_i0reverse_frame_2 - 0.034 14.3 0.7 0.048 13.9 0.7 1.3 1 0 0 1 1 1 0 Chromosome segregation protein Spc25 DUF1664 PF07889.12 NODE_61173_length_268_cov_1.811159_g53233_i0reverse_frame_3 - 0.17 11.9 1.4 0.2 11.7 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Arteri_Gl PF00951.18 NODE_61173_length_268_cov_1.811159_g53233_i0forward_frame_3 - 0.16 11.8 5.9 0.18 11.6 5.9 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein YHYH PF14240.6 NODE_61168_length_268_cov_1.914163_g53228_i0reverse_frame_2 - 0.014 15.4 1.7 0.02 14.9 1.7 1.2 1 0 0 1 1 1 0 YHYH protein NIF3 PF01784.18 NODE_61167_length_268_cov_1.922747_g53227_i0reverse_frame_3 - 0.0044 16.7 0.1 0.0047 16.6 0.1 1.1 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) TPR_4 PF07721.14 NODE_61164_length_268_cov_1.957082_g53224_i0reverse_frame_2 - 0.15 12.7 3.4 5.6 7.9 0.2 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF4605 PF15378.6 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_2 - 0.0053 16.6 0.0 0.0093 15.8 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4605) DUF5569 PF17729.1 NODE_61153_length_268_cov_2.141631_g53213_i0reverse_frame_2 - 0.04 13.8 0.1 0.046 13.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5569) DUF4164 PF13747.6 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_2 - 0.033 14.5 1.2 0.045 14.0 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Glyco_hydro_76 PF03663.14 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_2 - 0.078 12.5 0.0 0.089 12.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 76 DUF5551 PF17705.1 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_2 - 0.084 12.5 0.2 0.094 12.3 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5551) LRR_1 PF00560.33 NODE_61149_length_268_cov_2.184549_g53209_i0forward_frame_2 - 0.079 13.6 0.2 0.58 10.9 0.1 2.2 2 0 0 2 2 2 0 Leucine Rich Repeat CPSase_L_D3 PF02787.19 NODE_61148_length_268_cov_2.214592_g53208_i0forward_frame_3 - 0.033 14.5 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MFS_1 PF07690.16 NODE_61146_length_268_cov_2.248927_g53206_i0forward_frame_2 - 3.8e-09 35.9 2.3 4.2e-09 35.8 2.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Bindin PF02084.15 NODE_61140_length_268_cov_2.347639_g53200_i0reverse_frame_2 - 0.1 12.8 0.1 0.11 12.7 0.1 1.0 1 0 0 1 1 1 0 Bindin Na_trans_cytopl PF11933.8 NODE_61139_length_268_cov_2.420601_g53199_i0reverse_frame_3 - 0.022 14.6 0.6 0.028 14.2 0.6 1.3 1 1 0 1 1 1 0 Cytoplasmic domain of voltage-gated Na+ ion channel IBV_3A PF03617.13 NODE_61138_length_268_cov_2.429185_g53198_i0forward_frame_3 - 0.78 9.8 9.5 0.46 10.5 2.5 2.2 1 1 1 2 2 2 0 IBV 3A protein NTP_transf_3 PF12804.7 NODE_61137_length_268_cov_2.454936_g53197_i0reverse_frame_3 - 2.3e-06 28.0 0.0 2.5e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain Lyase_1 PF00206.20 NODE_61134_length_268_cov_2.493562_g53194_i0forward_frame_3 - 0.0043 16.5 0.0 0.0056 16.1 0.0 1.1 1 0 0 1 1 1 1 Lyase Ku_N PF03731.15 NODE_61133_length_268_cov_2.497854_g53193_i0reverse_frame_3 - 0.011 15.5 0.1 0.014 15.2 0.1 1.2 1 0 0 1 1 1 0 Ku70/Ku80 N-terminal alpha/beta domain NOG1 PF06858.14 NODE_61133_length_268_cov_2.497854_g53193_i0reverse_frame_3 - 0.045 13.5 0.0 0.095 12.5 0.0 1.6 1 0 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) Aldedh PF00171.22 NODE_61127_length_268_cov_2.759657_g53187_i0forward_frame_3 - 1.9e-26 92.6 0.0 2e-26 92.5 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family BSD PF03909.17 NODE_61126_length_268_cov_2.819742_g53186_i0reverse_frame_2 - 0.049 13.6 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 BSD domain CDC37_N PF03234.14 NODE_61124_length_268_cov_3.042918_g53184_i0forward_frame_3 - 0.032 15.2 1.5 0.037 14.9 1.5 1.1 1 0 0 1 1 1 0 Cdc37 N terminal kinase binding Fer4_20 PF14691.6 NODE_61122_length_268_cov_3.163090_g53182_i0forward_frame_3 - 0.081 12.7 1.0 0.096 12.5 1.0 1.1 1 0 0 1 1 1 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RNA_pol_Rpb1_5 PF04998.17 NODE_61120_length_268_cov_3.197425_g53180_i0reverse_frame_3 - 0.15 11.4 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 LysR_substrate PF03466.20 NODE_61120_length_268_cov_3.197425_g53180_i0forward_frame_3 - 2.5e-12 46.6 0.0 2.9e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Ank_3 PF13606.6 NODE_61120_length_268_cov_3.197425_g53180_i0forward_frame_3 - 0.08 13.5 0.1 0.23 12.1 0.0 1.8 2 0 0 2 2 2 0 Ankyrin repeat Aminotran_3 PF00202.21 NODE_61119_length_268_cov_3.330472_g53179_i0reverse_frame_2 - 8.8e-40 136.6 0.4 9.4e-40 136.5 0.4 1.0 1 0 0 1 1 1 1 Aminotransferase class-III PTS_EIIA_2 PF00359.22 NODE_61118_length_268_cov_3.386266_g53178_i0forward_frame_3 - 9.6e-08 32.0 0.0 1.1e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PTS_IIB PF02302.17 NODE_61118_length_268_cov_3.386266_g53178_i0forward_frame_3 - 0.061 14.0 1.3 0.12 13.1 0.8 1.7 2 0 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit PLD_C PF12357.8 NODE_61115_length_268_cov_4.802575_g53175_i0forward_frame_2 - 0.13 12.1 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Phospholipase D C terminal DUF5484 PF17583.2 NODE_61114_length_268_cov_16.635193_g53174_i0reverse_frame_3 - 0.16 11.7 0.8 0.26 11.0 0.8 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5484) DUF1287 PF06940.11 NODE_61114_length_268_cov_16.635193_g53174_i0reverse_frame_2 - 0.094 12.4 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1287) Med21 PF11221.8 NODE_61113_length_268_cov_31.669528_g53173_i0reverse_frame_3 - 0.35 11.1 4.8 0.52 10.6 4.8 1.2 1 0 0 1 1 1 0 Subunit 21 of Mediator complex # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks268.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks268.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks268.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks268.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Tmemb_18A PF09771.9 NODE_61105_length_268_cov_45.107296_g53165_i0forward_frame_2 - 0.043 14.2 0.4 0.05 14.0 0.4 1.3 1 0 0 1 1 1 0 Transmembrane protein 188 SSP160 PF06933.11 NODE_61103_length_268_cov_58.845494_g53163_i0reverse_frame_2 - 0.34 9.0 2.9 0.37 8.9 2.9 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF1828 PF08861.10 NODE_61102_length_268_cov_60.128755_g53162_i0reverse_frame_3 - 0.028 14.7 0.2 0.036 14.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF1828 Swi3 PF07962.12 NODE_61098_length_268_cov_70.643777_g53158_i0reverse_frame_2 - 0.37 10.8 2.9 0.84 9.7 3.0 1.6 1 1 0 1 1 1 0 Replication Fork Protection Component Swi3 IL12p40_C PF10420.9 NODE_61095_length_268_cov_73.004292_g53155_i0reverse_frame_2 - 0.05 14.1 0.8 0.067 13.7 0.8 1.1 1 0 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus Gram_pos_anchor PF00746.21 NODE_61094_length_268_cov_73.678112_g53154_i0forward_frame_2 - 1.3 9.0 4.9 9.3 6.3 0.0 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif AsiA PF09010.10 NODE_61093_length_268_cov_76.103004_g53153_i0reverse_frame_3 - 0.031 14.4 0.0 0.039 14.1 0.0 1.2 1 0 0 1 1 1 0 Anti-Sigma Factor A DDOST_48kD PF03345.14 NODE_61090_length_268_cov_83.017167_g53150_i0forward_frame_2 - 1.7e-05 23.9 0.0 1.8e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 Oligosaccharyltransferase 48 kDa subunit beta TGT PF01702.18 NODE_61090_length_268_cov_83.017167_g53150_i0forward_frame_2 - 0.13 11.4 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase Pyr_excise PF03013.14 NODE_61088_length_268_cov_89.630901_g53148_i0reverse_frame_2 - 0.063 13.3 0.0 0.075 13.0 0.0 1.1 1 0 0 1 1 1 0 Pyrimidine dimer DNA glycosylase DUF5365 PF17326.2 NODE_61085_length_268_cov_100.944206_g53145_i0reverse_frame_3 - 0.0076 16.6 0.1 0.0084 16.5 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5365) TMEM126 PF07114.11 NODE_61082_length_268_cov_123.454936_g53142_i0forward_frame_3 - 0.064 12.7 0.1 0.07 12.5 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 126 PMSI1 PF15322.6 NODE_61073_length_268_cov_350.884120_g53133_i0reverse_frame_3 - 0.27 10.6 1.0 0.3 10.5 1.0 1.0 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative Pkinase_C PF00433.24 NODE_61070_length_268_cov_587.244635_g53130_i0reverse_frame_3 - 2.9e-05 24.7 0.5 3.8e-05 24.3 0.5 1.3 1 0 0 1 1 1 1 Protein kinase C terminal domain BLACT_WH PF17778.1 NODE_61067_length_269_cov_1.012821_g53127_i0reverse_frame_2 - 0.082 12.9 0.2 0.15 12.1 0.2 1.4 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain DUF1560 PF07597.11 NODE_61063_length_269_cov_1.051282_g53123_i0forward_frame_3 - 0.053 13.5 0.2 0.11 12.5 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1560) MRP-S28 PF10213.9 NODE_61063_length_269_cov_1.051282_g53123_i0forward_frame_3 - 0.086 13.3 0.1 0.1 13.1 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit protein T6SS_Vgr PF13296.6 NODE_61059_length_269_cov_1.170940_g53119_i0reverse_frame_3 - 0.013 15.6 0.1 0.016 15.4 0.1 1.2 1 0 0 1 1 1 0 Putative type VI secretion system Rhs element Vgr MA-Mit PF09245.10 NODE_61053_length_269_cov_1.200855_g53113_i0reverse_frame_2 - 0.047 13.2 0.3 0.055 13.0 0.3 1.0 1 0 0 1 1 1 0 Mycoplasma arthritidis-derived mitogen PHM7_cyt PF14703.6 NODE_61051_length_269_cov_1.269231_g53111_i0forward_frame_3 - 0.00028 21.2 0.0 0.00031 21.0 0.0 1.1 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter Pkinase PF00069.25 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 9.4e-27 94.0 0.1 1.1e-26 93.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 8.9e-11 41.5 0.0 9.8e-11 41.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 7.2e-05 22.2 0.0 7.3e-05 22.2 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 0.029 13.7 0.0 0.029 13.7 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 0.065 12.8 0.1 0.073 12.6 0.1 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase Haspin_kinase PF12330.8 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 0.077 11.9 0.0 0.081 11.8 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Virul_fac_BrkB PF03631.15 NODE_61042_length_269_cov_1.431624_g53102_i0reverse_frame_3 - 0.0023 17.6 1.8 0.0023 17.6 1.8 1.1 1 0 0 1 1 1 1 Virulence factor BrkB DUF3112 PF11309.8 NODE_61042_length_269_cov_1.431624_g53102_i0reverse_frame_3 - 0.016 14.6 3.2 0.02 14.3 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) DUF3290 PF11694.8 NODE_61042_length_269_cov_1.431624_g53102_i0reverse_frame_3 - 1.8 8.5 5.0 0.48 10.4 0.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3290) DUF2443 PF10398.9 NODE_61042_length_269_cov_1.431624_g53102_i0reverse_frame_2 - 0.012 15.6 0.0 0.017 15.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) DUF4171 PF13775.6 NODE_61041_length_269_cov_1.435897_g53101_i0reverse_frame_3 - 2.6 8.5 7.4 3.2 8.2 7.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4171) FTSW_RODA_SPOVE PF01098.19 NODE_61040_length_269_cov_1.482906_g53100_i0reverse_frame_2 - 0.12 11.3 0.0 0.14 11.1 0.0 1.0 1 0 0 1 1 1 0 Cell cycle protein DUF629 PF04780.12 NODE_61039_length_269_cov_1.491453_g53099_i0forward_frame_2 - 0.09 11.3 1.3 0.098 11.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF629) TMC PF07810.13 NODE_61037_length_269_cov_1.495726_g53097_i0forward_frame_2 - 0.031 14.9 0.8 0.05 14.2 0.8 1.4 1 0 0 1 1 1 0 TMC domain FBPase_2 PF06874.11 NODE_61030_length_269_cov_1.589744_g53090_i0reverse_frame_2 - 0.062 11.6 0.0 0.074 11.3 0.0 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase WGR PF05406.15 NODE_61029_length_269_cov_1.598291_g53089_i0forward_frame_3 - 5.5e-05 23.1 0.1 9.3e-05 22.4 0.1 1.4 1 0 0 1 1 1 1 WGR domain PARP_reg PF02877.14 NODE_61029_length_269_cov_1.598291_g53089_i0forward_frame_3 - 0.00072 19.7 0.8 0.003 17.7 0.0 2.0 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase, regulatory domain YfiO PF13525.6 NODE_61027_length_269_cov_1.628205_g53087_i0reverse_frame_3 - 2.9e-26 92.5 2.5 3.3e-26 92.3 2.5 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein Peptidase_M15_2 PF05951.13 NODE_61027_length_269_cov_1.628205_g53087_i0reverse_frame_3 - 0.058 13.1 0.1 0.063 12.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF882) TMEM100 PF16311.5 NODE_61021_length_269_cov_1.705128_g53081_i0forward_frame_3 - 0.79 9.3 3.9 0.82 9.3 3.4 1.3 1 1 0 1 1 1 0 Transmembrane protein 100 Arg_tRNA_synt_N PF03485.16 NODE_61020_length_269_cov_1.709402_g53080_i0forward_frame_3 - 1.2e-13 51.4 0.3 1.5e-13 51.1 0.3 1.1 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain CCG PF02754.16 NODE_61020_length_269_cov_1.709402_g53080_i0forward_frame_3 - 0.14 12.4 0.0 0.18 12.0 0.0 1.4 1 1 0 1 1 1 0 Cysteine-rich domain DUF1684 PF07920.11 NODE_61020_length_269_cov_1.709402_g53080_i0forward_frame_2 - 0.15 12.4 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1684) Aft1_HRR PF11787.8 NODE_61016_length_269_cov_1.739316_g53076_i0reverse_frame_3 - 0.043 15.0 0.2 0.05 14.8 0.2 1.2 1 0 0 1 1 1 0 Aft1 HRR domain POC3_POC4 PF10448.9 NODE_61006_length_269_cov_1.829060_g53066_i0reverse_frame_3 - 0.064 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 20S proteasome chaperone assembly proteins 3 and 4 DUF3804 PF12707.7 NODE_61005_length_269_cov_1.829060_g53065_i0forward_frame_3 - 0.0043 16.8 0.3 0.0051 16.5 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3804) KIAA1430 PF13879.6 NODE_61004_length_269_cov_1.833333_g53064_i0forward_frame_3 - 0.00089 20.0 0.4 0.00099 19.8 0.4 1.1 1 0 0 1 1 1 1 KIAA1430 homologue FtsX PF02687.21 NODE_61003_length_269_cov_1.850427_g53063_i0reverse_frame_2 - 0.15 12.5 5.9 0.17 12.3 5.9 1.1 1 0 0 1 1 1 0 FtsX-like permease family ETRAMP PF09716.10 NODE_61003_length_269_cov_1.850427_g53063_i0forward_frame_2 - 0.049 13.7 1.0 0.062 13.4 1.0 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Herpes_LMP2 PF07415.11 NODE_61000_length_269_cov_1.905983_g53060_i0reverse_frame_2 - 0.072 11.9 4.6 0.081 11.7 4.6 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein SNF2_N PF00176.23 NODE_60999_length_269_cov_1.948718_g53059_i0forward_frame_2 - 0.0003 19.6 0.0 0.00034 19.4 0.0 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF444 PF04285.12 NODE_60999_length_269_cov_1.948718_g53059_i0forward_frame_2 - 0.13 11.4 0.4 0.13 11.3 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF444) SPC22 PF04573.12 NODE_60994_length_269_cov_2.089744_g53054_i0forward_frame_2 - 0.14 11.7 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Signal peptidase subunit FUSC-like PF12805.7 NODE_60992_length_269_cov_2.136752_g53052_i0forward_frame_3 - 2.3e-25 89.2 0.6 2.5e-25 89.1 0.6 1.0 1 0 0 1 1 1 1 FUSC-like inner membrane protein yccS HOCHOB PF17943.1 NODE_60992_length_269_cov_2.136752_g53052_i0forward_frame_3 - 0.057 14.1 0.1 0.066 13.9 0.1 1.1 1 0 0 1 1 1 0 Homeobox-cysteine loop-homeobox Lysis_col PF02402.16 NODE_60988_length_269_cov_2.260684_g53048_i0forward_frame_2 - 1.6 8.5 3.7 6.2 6.6 2.6 2.0 2 0 0 2 2 2 0 Lysis protein PTR2 PF00854.21 NODE_60986_length_269_cov_2.282051_g53046_i0reverse_frame_3 - 0.14 10.9 0.3 0.17 10.7 0.3 1.0 1 0 0 1 1 1 0 POT family EII-GUT PF03608.13 NODE_60985_length_269_cov_2.282051_g53045_i0forward_frame_2 - 5.2e-41 140.3 0.6 5.6e-41 140.2 0.6 1.0 1 0 0 1 1 1 1 PTS system enzyme II sorbitol-specific factor Sigma54_activat PF00158.26 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_3 - 8.6e-34 116.7 0.5 9.4e-34 116.5 0.5 1.0 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_3 - 3.7e-11 43.3 0.0 4.3e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_3 - 0.00065 19.7 0.1 0.0022 18.0 0.1 1.7 1 1 1 2 2 2 1 AAA domain (dynein-related subfamily) AAA_PrkA PF08298.11 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_3 - 0.079 11.9 0.0 0.094 11.6 0.0 1.0 1 0 0 1 1 1 0 PrkA AAA domain HutD PF05962.11 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_2 - 0.011 15.7 0.5 0.015 15.3 0.5 1.1 1 0 0 1 1 1 0 HutD TPR_10 PF13374.6 NODE_60981_length_269_cov_2.376068_g53041_i0reverse_frame_2 - 0.047 13.6 0.1 0.087 12.7 0.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Gamma-thionin PF00304.20 NODE_60980_length_269_cov_2.478632_g53040_i0reverse_frame_3 - 0.025 14.9 3.3 0.031 14.5 3.3 1.2 1 0 0 1 1 1 0 Gamma-thionin family Phage_Gp19 PF09355.10 NODE_60980_length_269_cov_2.478632_g53040_i0reverse_frame_2 - 0.15 12.5 0.3 2.8 8.4 0.0 2.0 1 1 1 2 2 2 0 Phage protein Gp19/Gp15/Gp42 KAAG1 PF15354.6 NODE_60979_length_269_cov_2.508547_g53039_i0reverse_frame_2 - 0.11 13.1 1.3 0.16 12.5 1.3 1.3 1 0 0 1 1 1 0 Kidney-associated antigen 1 SAB PF04382.13 NODE_60979_length_269_cov_2.508547_g53039_i0forward_frame_2 - 0.54 10.4 3.1 2.8 8.1 0.0 2.2 2 0 0 2 2 2 0 SAB domain T6SS_TssG PF06996.11 NODE_60976_length_269_cov_2.598291_g53036_i0forward_frame_3 - 0.014 14.6 1.2 0.017 14.4 1.2 1.1 1 0 0 1 1 1 0 Type VI secretion, TssG Acid_PPase PF12689.7 NODE_60974_length_269_cov_2.615385_g53034_i0reverse_frame_3 - 0.077 12.8 0.4 0.097 12.5 0.4 1.1 1 0 0 1 1 1 0 Acid Phosphatase p450 PF00067.22 NODE_60972_length_269_cov_2.653846_g53032_i0forward_frame_2 - 7.5e-08 31.5 0.1 8.2e-08 31.4 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 Inhibitor_I29 PF08246.12 NODE_60971_length_269_cov_2.679487_g53031_i0forward_frame_2 - 0.14 12.6 0.3 0.14 12.6 0.3 2.0 1 1 1 2 2 2 0 Cathepsin propeptide inhibitor domain (I29) AAA_lid_1 PF17857.1 NODE_60970_length_269_cov_2.752137_g53030_i0reverse_frame_3 - 0.05 13.8 1.7 0.069 13.4 0.7 1.7 1 1 1 2 2 2 0 AAA+ lid domain polyprenyl_synt PF00348.17 NODE_60964_length_269_cov_3.004274_g53024_i0reverse_frame_3 - 0.077 12.0 0.0 0.092 11.8 0.0 1.0 1 0 0 1 1 1 0 Polyprenyl synthetase Antimicrobial_7 PF08102.11 NODE_60960_length_269_cov_3.247863_g53020_i0forward_frame_2 - 0.84 9.9 5.4 2.5 8.4 4.3 2.3 2 1 0 2 2 2 0 Scorpion antimicrobial peptide Peptidase_M28 PF04389.17 NODE_60959_length_269_cov_3.264957_g53019_i0forward_frame_2 - 9.5e-13 48.3 0.1 1.2e-12 48.0 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M42 PF05343.14 NODE_60959_length_269_cov_3.264957_g53019_i0forward_frame_2 - 0.041 12.9 0.0 6.1 5.8 0.0 2.0 2 0 0 2 2 2 0 M42 glutamyl aminopeptidase TraD PF06412.11 NODE_60959_length_269_cov_3.264957_g53019_i0forward_frame_2 - 0.14 12.0 0.4 0.59 10.0 0.3 1.9 1 1 1 2 2 2 0 Conjugal transfer protein TraD zf-CDGSH PF09360.10 NODE_60957_length_269_cov_3.405983_g53017_i0forward_frame_3 - 0.055 13.7 0.1 0.087 13.1 0.1 1.4 1 0 0 1 1 1 0 Iron-binding zinc finger CDGSH type RbsD_FucU PF05025.13 NODE_60957_length_269_cov_3.405983_g53017_i0forward_frame_2 - 1.4e-22 80.6 0.1 1.6e-22 80.3 0.1 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family TRIF-NTD PF17798.1 NODE_60956_length_269_cov_3.641026_g53016_i0reverse_frame_2 - 0.093 12.8 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 TRIF N-terminal domain Acyl-ACP_TE PF01643.17 NODE_60955_length_269_cov_3.739316_g53015_i0reverse_frame_3 - 0.062 12.6 0.1 0.072 12.4 0.1 1.1 1 0 0 1 1 1 0 Acyl-ACP thioesterase MAP17 PF15807.5 NODE_60948_length_269_cov_33.867521_g53008_i0reverse_frame_3 - 0.29 11.4 8.5 0.34 11.1 8.5 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 POPLD PF08170.12 NODE_60948_length_269_cov_33.867521_g53008_i0reverse_frame_3 - 2.5 8.5 7.0 3.6 8.0 7.0 1.4 1 1 0 1 1 1 0 POPLD (NUC188) domain Presenilin PF01080.17 NODE_60948_length_269_cov_33.867521_g53008_i0reverse_frame_3 - 5.5 5.6 6.2 6.1 5.5 6.2 1.0 1 0 0 1 1 1 0 Presenilin E2F_TDP PF02319.20 NODE_60948_length_269_cov_33.867521_g53008_i0reverse_frame_2 - 0.033 14.3 0.3 0.041 13.9 0.3 1.3 1 0 0 1 1 1 0 E2F/DP family winged-helix DNA-binding domain DUF2527 PF10736.9 NODE_60943_length_269_cov_43.893162_g53003_i0reverse_frame_2 - 0.11 12.3 2.8 0.16 11.8 2.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) Rota_NS6 PF04866.12 NODE_60939_length_269_cov_49.196581_g52999_i0forward_frame_2 - 0.019 15.2 0.2 0.027 14.7 0.1 1.4 1 1 0 1 1 1 0 Rotavirus non-structural protein 6 SnoaL PF07366.12 NODE_60938_length_269_cov_49.320513_g52998_i0reverse_frame_2 - 3.7e-06 26.8 0.2 4.8e-06 26.4 0.2 1.1 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase Corazonin PF17308.2 NODE_60931_length_269_cov_62.282051_g52991_i0reverse_frame_2 - 0.093 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Pro-corazonin Rhomboid_SP PF12595.8 NODE_60930_length_269_cov_62.717949_g52990_i0forward_frame_2 - 0.026 13.9 2.8 0.028 13.8 2.8 1.1 1 0 0 1 1 1 0 Rhomboid serine protease SWIRM-assoc_1 PF16495.5 NODE_60927_length_269_cov_67.623932_g52987_i0reverse_frame_2 - 3e-09 36.7 1.6 3e-09 36.7 1.6 1.5 2 0 0 2 2 2 1 SWIRM-associated region 1 FliJ PF02050.16 NODE_60927_length_269_cov_67.623932_g52987_i0reverse_frame_2 - 0.017 15.4 7.3 0.028 14.6 7.3 1.3 1 1 0 1 1 1 0 Flagellar FliJ protein DSPc PF00782.20 NODE_60926_length_269_cov_70.414530_g52986_i0forward_frame_3 - 2.2e-07 30.7 0.0 2.9e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_60926_length_269_cov_70.414530_g52986_i0forward_frame_3 - 0.12 11.9 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase DUF390 PF04094.14 NODE_60924_length_269_cov_73.102564_g52984_i0forward_frame_3 - 0.022 13.1 0.0 0.024 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) DUF4447 PF14590.6 NODE_60922_length_269_cov_83.012821_g52982_i0reverse_frame_3 - 0.096 12.5 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4447) MutS_V PF00488.21 NODE_60922_length_269_cov_83.012821_g52982_i0forward_frame_2 - 1.8e-07 31.3 0.0 2.3e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 MutS domain V Flu_M2 PF00599.17 NODE_60920_length_269_cov_94.179487_g52980_i0reverse_frame_2 - 0.07 13.2 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Influenza Matrix protein (M2) AGTRAP PF06396.11 NODE_60918_length_269_cov_97.106838_g52978_i0reverse_frame_3 - 0.08 12.7 0.1 0.099 12.4 0.1 1.0 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) MCLC PF05934.11 NODE_60914_length_269_cov_126.076923_g52974_i0forward_frame_3 - 0.13 11.0 0.7 0.13 10.9 0.7 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Cadherin_tail PF15974.5 NODE_60912_length_269_cov_141.457265_g52972_i0forward_frame_3 - 1.3 9.3 5.6 1.4 9.2 5.6 1.3 1 1 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region HK_sensor PF16750.5 NODE_60910_length_269_cov_146.641026_g52970_i0reverse_frame_3 - 0.029 14.7 0.0 0.034 14.4 0.0 1.1 1 0 0 1 1 1 0 Sensor domain of 2-component histidine kinase ATP-cone PF03477.16 NODE_60910_length_269_cov_146.641026_g52970_i0reverse_frame_3 - 0.048 14.2 1.4 0.059 14.0 1.4 1.1 1 0 0 1 1 1 0 ATP cone domain SpoVIF PF14069.6 NODE_60910_length_269_cov_146.641026_g52970_i0reverse_frame_3 - 0.065 13.0 2.2 0.089 12.6 2.2 1.4 1 1 0 1 1 1 0 Stage VI sporulation protein F NADH_4Fe-4S PF10589.9 NODE_60902_length_269_cov_198.705128_g52962_i0reverse_frame_3 - 0.052 13.6 0.0 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ctr PF04145.15 NODE_60899_length_269_cov_291.363248_g52959_i0reverse_frame_2 - 0.0055 17.3 0.1 0.0064 17.1 0.1 1.0 1 0 0 1 1 1 1 Ctr copper transporter family DUF4834 PF16118.5 NODE_60899_length_269_cov_291.363248_g52959_i0reverse_frame_2 - 0.045 14.7 0.3 0.058 14.4 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DDRGK PF09756.9 NODE_60896_length_269_cov_370.252137_g52956_i0reverse_frame_3 - 0.26 10.9 24.0 0.27 10.8 24.0 1.1 1 0 0 1 1 1 0 DDRGK domain PNISR PF15996.5 NODE_60896_length_269_cov_370.252137_g52956_i0reverse_frame_3 - 1.2 9.3 19.6 1.6 9.0 19.6 1.1 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR Nop14 PF04147.12 NODE_60896_length_269_cov_370.252137_g52956_i0reverse_frame_3 - 2.8 6.1 20.7 3.2 5.9 20.7 1.0 1 0 0 1 1 1 0 Nop14-like family FAM60A PF15396.6 NODE_60896_length_269_cov_370.252137_g52956_i0reverse_frame_3 - 3.8 7.5 8.8 3.8 7.5 8.8 1.0 1 0 0 1 1 1 0 Protein Family FAM60A MAJIN PF15077.6 NODE_60896_length_269_cov_370.252137_g52956_i0reverse_frame_3 - 4.5 7.0 8.5 5 6.9 8.5 1.0 1 0 0 1 1 1 0 Membrane-anchored junction protein DUF5401 PF17380.2 NODE_60896_length_269_cov_370.252137_g52956_i0reverse_frame_3 - 6.7 4.6 29.7 7.9 4.4 29.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Trypan_PARP PF05887.11 NODE_60896_length_269_cov_370.252137_g52956_i0reverse_frame_3 - 7.9 6.5 7.2 9.2 6.2 7.2 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF2058 PF09831.9 NODE_60896_length_269_cov_370.252137_g52956_i0reverse_frame_3 - 8.2 6.6 16.7 9.1 6.4 16.7 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2058) NARP1 PF12569.8 NODE_60896_length_269_cov_370.252137_g52956_i0reverse_frame_3 - 9.9 4.9 14.1 12 4.7 14.1 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TBCC PF07986.12 NODE_60885_length_270_cov_1.021277_g52945_i0forward_frame_2 - 0.0019 17.9 0.9 0.0022 17.7 0.9 1.2 1 0 0 1 1 1 1 Tubulin binding cofactor C AMP-binding_C PF13193.6 NODE_60874_length_270_cov_1.327660_g52934_i0reverse_frame_3 - 7.4e-16 58.9 0.2 9e-16 58.6 0.2 1.1 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain YrhC PF14143.6 NODE_60873_length_270_cov_1.344681_g52933_i0forward_frame_3 - 0.026 14.6 1.6 0.037 14.1 1.6 1.4 1 0 0 1 1 1 0 YrhC-like protein MBD PF01429.19 NODE_60870_length_270_cov_1.361702_g52930_i0reverse_frame_3 - 0.00072 19.2 0.0 0.001 18.7 0.0 1.2 1 0 0 1 1 1 1 Methyl-CpG binding domain DUF2735 PF10931.8 NODE_60870_length_270_cov_1.361702_g52930_i0reverse_frame_3 - 0.014 16.0 0.3 0.034 14.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2735) TrkA_C PF02080.21 NODE_60864_length_270_cov_1.519149_g52924_i0forward_frame_3 - 4.4e-10 39.3 0.1 4.7e-05 23.1 0.0 2.1 2 0 0 2 2 2 2 TrkA-C domain DUF3094 PF11293.8 NODE_60863_length_270_cov_1.519149_g52923_i0forward_frame_3 - 0.14 11.9 0.5 0.21 11.3 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) dDENN PF03455.19 NODE_60862_length_270_cov_1.540426_g52922_i0reverse_frame_2 - 0.11 12.5 0.2 0.11 12.5 0.2 1.8 3 0 0 3 3 3 0 dDENN domain Phage_holin_4_1 PF05105.12 NODE_60861_length_270_cov_1.574468_g52921_i0reverse_frame_2 - 0.086 13.0 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage holin family Levi_coat PF01819.17 NODE_60858_length_270_cov_1.655319_g52918_i0reverse_frame_3 - 0.098 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Levivirus coat protein HJURP_C PF12347.8 NODE_60856_length_270_cov_1.697872_g52916_i0forward_frame_2 - 0.027 14.5 0.5 0.044 13.8 0.5 1.3 1 0 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat Methyltransf_14 PF08484.11 NODE_60854_length_270_cov_1.710638_g52914_i0forward_frame_3 - 0.017 15.0 0.0 0.018 14.9 0.0 1.0 1 0 0 1 1 1 0 C-methyltransferase C-terminal domain zf_Rg PF17915.1 NODE_60852_length_270_cov_1.740426_g52912_i0forward_frame_2 - 0.075 12.4 1.1 0.38 10.2 0.6 2.0 2 0 0 2 2 2 0 Reverse gyrase zinc finger HDAC4_Gln PF12203.8 NODE_60851_length_270_cov_1.761702_g52911_i0reverse_frame_2 - 0.015 15.5 4.9 0.019 15.1 4.9 1.1 1 0 0 1 1 1 0 Glutamine rich N terminal domain of histone deacetylase 4 FAP PF07174.11 NODE_60849_length_270_cov_1.770213_g52909_i0reverse_frame_2 - 2.1 7.7 9.3 2.4 7.6 9.3 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_60849_length_270_cov_1.770213_g52909_i0forward_frame_3 - 0.0079 16.2 4.5 0.0096 15.9 4.5 1.2 1 0 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_60849_length_270_cov_1.770213_g52909_i0forward_frame_2 - 0.031 14.2 7.3 0.058 13.3 7.3 1.5 1 1 0 1 1 1 0 Lamprin Chorion_1 PF01723.16 NODE_60849_length_270_cov_1.770213_g52909_i0forward_frame_2 - 0.1 12.6 2.9 0.12 12.4 2.9 1.2 1 0 0 1 1 1 0 Chorion protein Ribosomal_L4 PF00573.22 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_2 - 0.37 10.4 3.3 0.42 10.3 3.3 1.1 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family FIIND PF13553.6 NODE_60845_length_270_cov_1.834043_g52905_i0forward_frame_3 - 0.055 12.9 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 Function to find tRNA-synt_2c PF01411.19 NODE_60841_length_270_cov_1.953191_g52901_i0forward_frame_2 - 1.2e-16 60.4 0.0 1.2e-16 60.4 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) Runt PF00853.19 NODE_60841_length_270_cov_1.953191_g52901_i0forward_frame_2 - 0.089 12.3 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Runt domain DUF3645 PF12359.8 NODE_60838_length_270_cov_2.017021_g52898_i0reverse_frame_2 - 0.023 14.1 0.0 0.25 10.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3645) DnaJ PF00226.31 NODE_60838_length_270_cov_2.017021_g52898_i0reverse_frame_2 - 0.034 14.3 0.0 0.047 13.8 0.0 1.2 1 0 0 1 1 1 0 DnaJ domain DUF3391 PF11871.8 NODE_60835_length_270_cov_2.055319_g52895_i0forward_frame_3 - 0.00056 20.5 4.9 0.00063 20.3 4.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3391) MecA PF05389.12 NODE_60835_length_270_cov_2.055319_g52895_i0forward_frame_3 - 0.022 14.4 0.8 0.022 14.4 0.8 1.0 1 0 0 1 1 1 0 Negative regulator of genetic competence (MecA) DAHP_synth_2 PF01474.16 NODE_60833_length_270_cov_2.080851_g52893_i0reverse_frame_2 - 2.4e-06 26.3 0.2 2.5e-06 26.3 0.2 1.1 1 0 0 1 1 1 1 Class-II DAHP synthetase family BCNT PF07572.12 NODE_60833_length_270_cov_2.080851_g52893_i0reverse_frame_2 - 0.017 15.1 0.4 0.024 14.7 0.4 1.2 1 0 0 1 1 1 0 Bucentaur or craniofacial development GldM_N PF12081.8 NODE_60833_length_270_cov_2.080851_g52893_i0reverse_frame_2 - 0.052 13.6 0.1 0.056 13.5 0.1 1.1 1 0 0 1 1 1 0 GldM N-terminal domain Spore_YhaL PF14147.6 NODE_60833_length_270_cov_2.080851_g52893_i0reverse_frame_2 - 0.2 11.4 2.2 11 5.9 0.0 2.6 1 1 2 3 3 3 0 Sporulation protein YhaL Hydantoinase_B PF02538.14 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_3 - 0.06 11.7 0.0 0.074 11.5 0.0 1.1 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase DUF2318 PF10080.9 NODE_60832_length_270_cov_2.085106_g52892_i0forward_frame_2 - 0.068 13.3 0.1 0.085 13.0 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) EKR PF10371.9 NODE_60831_length_270_cov_2.102128_g52891_i0forward_frame_3 - 0.046 13.5 0.0 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function DUF5109 PF17134.4 NODE_60829_length_270_cov_2.191489_g52889_i0reverse_frame_3 - 0.042 13.8 0.4 0.047 13.6 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5109) DsrC PF04358.13 NODE_60826_length_270_cov_2.255319_g52886_i0forward_frame_2 - 2.1e-34 118.3 0.0 2.2e-34 118.2 0.0 1.0 1 0 0 1 1 1 1 DsrC like protein C2 PF00168.30 NODE_60824_length_270_cov_2.391489_g52884_i0reverse_frame_3 - 2.4e-09 37.4 0.0 2.6e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 C2 domain C2 PF00168.30 NODE_60824_length_270_cov_2.391489_g52884_i0reverse_frame_2 - 1.5e-05 25.2 0.0 1.8e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 C2 domain CRISPR_Cse2 PF09485.10 NODE_60823_length_270_cov_2.404255_g52883_i0reverse_frame_3 - 0.04 14.4 0.0 0.047 14.2 0.0 1.0 1 0 0 1 1 1 0 CRISPR-associated protein Cse2 (CRISPR_cse2) Ribosomal_L11 PF00298.19 NODE_60823_length_270_cov_2.404255_g52883_i0reverse_frame_2 - 0.031 14.8 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain DUF2649 PF10854.8 NODE_60823_length_270_cov_2.404255_g52883_i0forward_frame_2 - 0.009 16.3 2.5 0.015 15.6 2.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2649) SDF PF00375.18 NODE_60818_length_270_cov_2.655319_g52878_i0forward_frame_3 - 6.9e-21 74.7 2.7 7.4e-21 74.6 2.7 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family TMEMspv1-c74-12 PF11044.8 NODE_60818_length_270_cov_2.655319_g52878_i0forward_frame_3 - 0.48 10.5 2.8 0.72 9.9 2.8 1.4 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Antimicrobial25 PF16839.5 NODE_60816_length_270_cov_2.706383_g52876_i0reverse_frame_3 - 1.6 8.9 7.9 11 6.2 0.3 2.3 2 1 0 2 2 2 0 Nematode antimicrobial peptide ERp29 PF07749.12 NODE_60816_length_270_cov_2.706383_g52876_i0reverse_frame_2 - 0.23 12.4 3.4 2.1 9.3 0.1 2.0 1 1 1 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain E1_UFD PF09358.10 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_3 - 0.097 13.4 0.1 0.19 12.4 0.0 1.5 1 1 0 1 1 1 0 Ubiquitin fold domain Baculo_PEP_C PF04513.12 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_2 - 0.037 14.1 1.4 0.045 13.8 1.4 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Streptin-Immun PF11083.8 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_2 - 0.044 14.2 2.1 0.16 12.4 0.5 2.1 1 1 1 2 2 2 0 Lantibiotic streptin immunity protein Prominin PF05478.11 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_2 - 0.05 11.6 1.2 0.055 11.4 1.2 1.0 1 0 0 1 1 1 0 Prominin Fib_alpha PF08702.10 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_2 - 0.2 11.9 2.0 0.24 11.6 2.0 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family NFACT-R_1 PF05670.13 NODE_60813_length_270_cov_2.757447_g52873_i0reverse_frame_2 - 9.8e-15 55.1 0.0 1.5e-14 54.5 0.0 1.3 1 0 0 1 1 1 1 NFACT protein RNA binding domain BatD PF13584.6 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.0038 16.1 2.5 0.0044 15.9 2.5 1.0 1 0 0 1 1 1 1 Oxygen tolerance TMEM154 PF15102.6 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.0048 16.8 8.2 0.0063 16.4 8.2 1.2 1 0 0 1 1 1 1 TMEM154 protein family DUF2207 PF09972.9 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.0096 14.7 0.3 0.0098 14.7 0.3 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Orf78 PF06024.12 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.078 13.3 0.1 0.12 12.7 0.0 1.3 1 1 0 1 1 1 0 Orf78 (ac78) Stevor PF17410.2 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.12 11.9 3.0 0.15 11.6 3.0 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF3377 PF11857.8 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.17 11.8 6.8 0.063 13.2 2.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) DUF4013 PF13197.6 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.19 11.6 9.4 0.23 11.3 9.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) DUF5305 PF17231.2 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.65 9.4 6.0 0.91 8.9 6.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5305) TMEM251 PF15190.6 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.95 9.4 6.8 1.1 9.2 6.8 1.3 1 1 0 1 1 1 0 Transmembrane protein 251 DUF5383 PF17355.2 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 1.5 9.2 4.4 2.3 8.6 4.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5383) Pox_EPC_I2-L1 PF12575.8 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 3.2 8.0 5.9 1.2 9.5 2.5 2.0 2 0 0 2 2 2 0 Poxvirus entry protein complex L1 and I2 DUF3283 PF11686.8 NODE_60808_length_270_cov_3.123404_g52868_i0forward_frame_2 - 0.072 12.9 0.4 0.099 12.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3283) NDUF_B6 PF09782.9 NODE_60807_length_270_cov_3.225532_g52867_i0reverse_frame_3 - 0.17 12.0 0.5 0.19 11.8 0.5 1.0 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit IBP39 PF11422.8 NODE_60805_length_270_cov_3.336170_g52865_i0forward_frame_2 - 0.079 12.7 0.1 0.084 12.6 0.1 1.0 1 0 0 1 1 1 0 Initiator binding protein 39 kDa DUF334 PF03904.13 NODE_60803_length_270_cov_3.659574_g52863_i0reverse_frame_2 - 0.17 11.4 0.8 0.19 11.3 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) Gal-3-0_sulfotr PF06990.11 NODE_60802_length_270_cov_3.893617_g52862_i0reverse_frame_3 - 0.062 12.2 0.1 0.073 11.9 0.1 1.0 1 0 0 1 1 1 0 Galactose-3-O-sulfotransferase Autophagy_N PF03986.13 NODE_60802_length_270_cov_3.893617_g52862_i0forward_frame_2 - 0.058 13.3 0.0 0.075 13.0 0.0 1.1 1 0 0 1 1 1 0 Autophagocytosis associated protein (Atg3), N-terminal domain Serglycin PF04360.12 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_3 - 0.045 13.7 0.8 0.046 13.7 0.8 1.1 1 0 0 1 1 1 0 Serglycin DUF508 PF04370.12 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_3 - 0.056 13.2 4.2 0.064 13.0 4.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF508) AF-4 PF05110.13 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_3 - 0.21 9.6 10.3 0.2 9.7 10.3 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein SR-25 PF10500.9 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_3 - 2.6 7.6 18.6 2.8 7.5 18.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Mucin PF01456.17 NODE_60800_length_270_cov_8.085106_g52860_i0forward_frame_2 - 0.12 12.3 19.5 0.13 12.2 19.5 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein SSP160 PF06933.11 NODE_60800_length_270_cov_8.085106_g52860_i0forward_frame_2 - 5 5.2 21.0 5.4 5.1 21.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 SP24 PF16504.5 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_3 - 0.094 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Putative virion membrane protein of plant and insect virus zf-C2H2 PF00096.26 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 8.8e-06 25.9 10.7 0.00066 20.0 3.7 3.1 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_2 PF12756.7 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 1.8e-05 25.0 1.4 2.2e-05 24.7 1.4 1.3 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 1.9e-05 25.1 6.9 0.0023 18.6 0.9 3.1 2 1 1 3 3 3 2 C2H2-type zinc finger zf-C2HE PF16278.5 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.00056 20.3 8.3 0.0011 19.4 3.2 2.2 1 1 1 2 2 2 1 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_11 PF16622.5 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.0034 17.1 1.5 0.073 12.9 0.2 2.5 3 0 0 3 3 3 1 zinc-finger C2H2-type zf-H2C2_5 PF13909.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.004 16.9 14.9 0.045 13.5 0.1 3.9 4 0 0 4 4 4 2 C2H2-type zinc-finger domain zf-C2H2_3rep PF18868.1 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.02 15.6 0.4 0.024 15.3 0.4 1.2 1 0 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats DM PF00751.18 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.051 13.5 1.2 0.051 13.5 1.2 2.3 1 1 1 2 2 2 0 DM DNA binding domain zf-C2H2_jaz PF12171.8 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.058 13.7 6.9 0.058 13.7 6.9 2.4 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-BED PF02892.15 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 1.1 9.4 14.3 16 5.6 11.2 2.9 1 1 1 2 2 2 0 BED zinc finger zf-C2H2_6 PF13912.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 1.3 9.1 13.0 0.092 12.8 4.0 2.5 3 0 0 3 3 3 0 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 3.1 8.4 10.8 0.55 10.8 1.3 3.0 3 0 0 3 3 3 0 Zinc-finger double domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks269.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks269.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks269.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks269.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Lipase_3 PF01764.25 ORF56701 - 8.2e-22 77.6 0.0 1.4e-21 76.8 0.0 1.4 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 ORF56701 - 4.4e-05 23.1 0.0 0.00015 21.4 0.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Thioesterase PF00975.20 ORF56701 - 0.04 14.0 0.0 0.059 13.5 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Abhydrolase_6 PF12697.7 ORF56701 - 0.35 11.5 3.3 5.2 7.6 3.6 1.9 1 1 0 1 1 1 0 Alpha/beta hydrolase family TPH PF13868.6 ORF50738 - 3.3e-49 167.3 149.0 4.1e-49 167.0 149.0 1.1 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain Syndecan PF01034.20 ORF44147 - 0.021 14.7 0.2 0.021 14.7 0.2 1.7 2 0 0 2 2 2 0 Syndecan domain SRTM1 PF15872.5 ORF44147 - 0.036 14.2 3.4 0.49 10.6 0.1 2.7 2 0 0 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 FeoB_associated PF12669.7 ORF44147 - 1 9.8 5.3 5 7.6 1.1 2.7 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein Baculo_11_kDa PF06143.11 ORF44147 - 1.1 8.9 4.5 2.7 7.6 0.7 2.4 2 0 0 2 2 2 0 Baculovirus 11 kDa family Lustrin_cystein PF14625.6 ORF44147 - 3.8 7.9 8.5 1.9 8.9 5.6 2.0 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain Aminotran_5 PF00266.19 ORF41465 - 1.3e-89 300.7 0.0 1.6e-89 300.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF41465 - 3.3e-06 25.9 0.1 7.1e-06 24.8 0.0 1.5 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 ORF41465 - 1.3e-05 24.7 0.1 1.3e-05 24.6 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 ORF41465 - 0.0081 15.5 0.1 0.013 14.8 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family p450 PF00067.22 ORF34476 - 4.4e-60 203.7 0.0 5.3e-60 203.5 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Kinesin PF00225.23 ORF20131 - 1.4e-42 145.8 0.1 2.2e-42 145.2 0.1 1.3 1 0 0 1 1 1 1 Kinesin motor domain DUF3287 PF11690.8 ORF20131 - 0.098 12.4 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) Cation_ATPase_C PF00689.21 ORF17756 - 1.1e-40 139.3 1.1 1.1e-40 139.3 1.1 1.4 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF17756 - 0.00016 22.0 0.6 0.0014 18.9 0.6 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF17756 - 0.028 14.1 0.3 0.028 14.1 0.3 1.6 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase PhoLip_ATPase_C PF16212.5 ORF17756 - 0.78 9.4 11.2 1.4 8.6 4.7 2.4 2 1 0 2 2 2 0 Phospholipid-translocating P-type ATPase C-terminal DUF1570 PF07607.11 ORF1717 - 0.021 15.2 0.3 0.78 10.0 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1570) DUF5065 PF16723.5 ORF1717 - 0.19 11.8 2.2 0.3 11.1 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5065) Ion_trans PF00520.31 ORF14464 - 4.2e-16 58.9 25.0 6e-16 58.4 25.0 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_5 PF13202.6 ORF14464 - 3.6e-10 38.9 1.3 5.1e-06 25.7 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 ORF14464 - 6.2e-09 34.8 0.9 4.6e-05 22.7 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF14464 - 2e-08 33.5 0.2 0.00059 19.6 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF14464 - 2e-06 28.1 0.4 6.2e-06 26.6 0.1 2.0 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF14464 - 2.5e-05 24.0 0.1 0.00079 19.2 0.0 2.6 2 0 0 2 2 2 1 EF-hand domain pair DUF1570 PF07607.11 ORF13859 - 0.021 15.2 0.3 0.78 10.0 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1570) DUF5065 PF16723.5 ORF13859 - 0.19 11.8 2.2 0.3 11.1 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5065) Phage_GPL PF05926.11 ORF117 - 0.077 13.0 0.5 0.15 12.1 0.5 1.4 1 0 0 1 1 1 0 Phage head completion protein (GPL) DUF1570 PF07607.11 ORF106074 - 0.02 15.2 0.3 0.78 10.0 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1570) DUF5065 PF16723.5 ORF106074 - 0.19 11.8 2.2 0.3 11.1 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5065) Hexokinase_2 PF03727.16 ORF104900 - 0.14 11.6 0.2 0.22 10.9 0.2 1.3 1 0 0 1 1 1 0 Hexokinase PhyH PF05721.13 ORF103991 - 3.9e-05 24.0 0.7 8.9e-05 22.8 0.7 1.6 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) ACOX PF01756.19 NODE_12992_length_1228_cov_1343.291702_g9723_i0forward_frame_1 - 0.12 11.9 0.5 0.21 11.1 0.5 1.3 1 0 0 1 1 1 0 Acyl-CoA oxidase Jas PF16135.5 NODE_12878_length_1233_cov_236.646912_g2101_i2forward_frame_3 - 0.28 11.4 1.9 0.66 10.2 1.9 1.6 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling MFS_1 PF07690.16 ORF98996 - 6.2e-36 124.0 32.5 6.2e-36 124.0 32.5 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF98996 - 1e-08 34.5 5.6 1e-08 34.5 5.6 3.0 2 2 1 3 3 3 2 Sugar (and other) transporter Dynein_C PF18199.1 ORF97693 - 2.5e-109 365.2 0.0 2.9e-109 365.0 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF97693 - 9.1e-26 90.6 0.2 1.5e-25 89.9 0.2 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain PPR_2 PF13041.6 ORF84822 - 8.5e-24 83.5 0.0 4.5e-06 26.8 0.0 6.0 5 1 1 6 6 6 5 PPR repeat family PPR_3 PF13812.6 ORF84822 - 6.1e-20 71.1 0.0 3.3e-09 36.7 0.0 5.7 4 2 2 6 6 6 4 Pentatricopeptide repeat domain PPR PF01535.20 ORF84822 - 2.1e-17 62.0 0.1 0.0034 17.5 0.0 7.0 8 0 0 8 8 8 3 PPR repeat PPR_1 PF12854.7 ORF84822 - 1.6e-11 43.7 0.0 0.013 15.2 0.0 6.5 6 0 0 6 6 6 3 PPR repeat PPR_long PF17177.4 ORF84822 - 0.00069 19.0 0.1 0.073 12.4 0.1 2.5 1 1 2 3 3 3 2 Pentacotripeptide-repeat region of PRORP TPR_7 PF13176.6 ORF84822 - 0.21 11.7 2.9 38 4.6 0.0 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat COX5A PF02284.16 ORF84822 - 0.22 11.6 0.0 17 5.5 0.0 2.5 1 1 1 2 2 2 0 Cytochrome c oxidase subunit Va SART-1 PF03343.13 ORF82171 - 2.4e-16 59.5 52.4 1.9e-10 40.0 0.5 2.4 2 1 1 3 3 3 2 SART-1 family YniB PF14002.6 ORF82171 - 5.4 6.8 7.2 3.4 7.4 2.0 2.4 2 0 0 2 2 2 0 YniB-like protein RAP PF08373.10 ORF69107 - 1.5e-07 31.3 0.0 2.6e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 ORF69107 - 0.0021 18.2 0.0 0.0048 17.1 0.0 1.7 1 0 0 1 1 1 1 REase_MTES_1575 Thioesterase PF00975.20 ORF68564 - 5.1e-06 26.8 0.0 9.6e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Thioesterase domain FSH1 PF03959.13 ORF68564 - 0.0037 17.0 0.0 0.0091 15.7 0.0 1.7 2 0 0 2 2 2 1 Serine hydrolase (FSH1) AA_permease_2 PF13520.6 ORF67402 - 3.2e-20 72.4 23.5 4.1e-20 72.0 23.5 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF67402 - 1e-18 67.2 20.7 1.3e-17 63.5 20.7 2.0 1 1 0 1 1 1 1 Amino acid permease PhoQ_Sensor PF08918.10 ORF67402 - 7.2 6.4 5.6 3.8 7.3 0.3 2.3 2 0 0 2 2 2 0 PhoQ Sensor PRKCSH_1 PF13015.6 ORF55133 - 3e-18 66.0 0.0 5.2e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein PRKCSH PF07915.13 ORF55133 - 0.00063 20.7 1.1 0.002 19.1 1.1 1.9 1 1 0 1 1 1 1 Glucosidase II beta subunit-like protein DUF3450 PF11932.8 ORF55133 - 0.0087 15.4 0.6 0.93 8.7 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3450) PRKG1_interact PF15898.5 ORF55133 - 0.12 13.3 4.2 6.6 7.7 0.0 2.5 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain Med30 PF11315.8 ORF55133 - 0.13 12.5 0.5 0.34 11.1 0.0 1.9 2 0 0 2 2 2 0 Mediator complex subunit 30 DUF948 PF06103.11 ORF55133 - 0.15 12.3 0.3 0.47 10.7 0.1 1.9 2 0 0 2 2 1 0 Bacterial protein of unknown function (DUF948) DUF2207 PF09972.9 ORF55133 - 0.16 10.7 0.0 0.78 8.4 0.0 1.8 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) DHR10 PF18595.1 ORF55133 - 0.29 11.2 10.4 3.4 7.8 1.5 3.2 3 0 0 3 3 3 0 Designed helical repeat protein 10 domain Filament PF00038.21 ORF55133 - 0.44 10.1 6.3 1.1 8.8 2.0 2.1 2 0 0 2 2 2 0 Intermediate filament protein DUF1043 PF06295.12 ORF55133 - 0.99 9.4 3.2 0.68 9.9 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) Spc7 PF08317.11 ORF55133 - 0.99 8.2 5.3 0.47 9.3 1.0 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein CENP-Q PF13094.6 ORF55133 - 1.1 9.5 10.2 0.46 10.7 5.2 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit TPR_14 PF13428.6 ORF55133 - 1.3 10.0 4.7 8.7 7.5 0.1 3.7 3 0 0 3 3 3 0 Tetratricopeptide repeat Spc24 PF08286.11 ORF55133 - 3.6 7.9 5.5 4.5 7.6 0.8 2.6 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 APG6_N PF17675.1 ORF55133 - 4.9 7.7 17.6 1.2 9.6 9.2 2.5 2 1 0 2 2 2 0 Apg6 coiled-coil region KELK PF15796.5 ORF55133 - 5.4 7.5 11.0 14 6.2 3.3 2.6 2 0 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase TelA PF05816.11 ORF55133 - 6.1 5.8 5.8 18 4.3 0.0 2.6 2 1 1 3 3 3 0 Toxic anion resistance protein (TelA) UPF0121 PF03661.13 ORF38652 - 0.048 13.1 4.2 0.09 12.2 4.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) LRR_4 PF12799.7 ORF35330 - 3.3e-10 40.0 13.4 1.8e-05 25.0 6.1 3.8 1 1 3 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF35330 - 6.2e-09 35.5 9.8 6.8e-06 25.7 8.5 3.1 2 1 1 3 3 3 3 Leucine rich repeat LRR_9 PF14580.6 ORF35330 - 2.2e-07 30.6 13.3 0.0004 19.9 0.2 2.8 2 2 1 3 3 3 2 Leucine-rich repeat GIT_CC PF16559.5 ORF35330 - 0.0067 16.3 0.6 0.0067 16.3 0.6 4.6 4 0 0 4 4 4 1 GIT coiled-coil Rho guanine nucleotide exchange factor PKcGMP_CC PF16808.5 ORF35330 - 1.8 8.5 13.3 19 5.2 0.1 4.3 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF3573 PF12097.8 ORF35330 - 2.2 7.0 13.1 0.37 9.5 3.7 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3573) DUF424 PF04242.13 ORF35330 - 2.5 8.4 5.6 1.2e+02 3.0 0.0 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF424) LRR_6 PF13516.6 ORF35330 - 2.9 8.2 8.5 1.9 8.7 1.1 4.0 4 0 0 4 4 4 0 Leucine Rich repeat YojJ PF10372.9 ORF35330 - 3.5 7.8 9.5 0.47 10.6 0.1 3.2 3 0 0 3 3 3 0 Bacterial membrane-spanning protein N-terminus SlyX PF04102.12 ORF35330 - 5 7.8 12.4 16 6.2 1.0 3.9 2 1 0 3 3 3 0 SlyX ZapB PF06005.12 ORF35330 - 6.6 7.3 35.8 0.044 14.2 6.6 4.6 2 1 2 4 4 4 0 Cell division protein ZapB HMG_box PF00505.19 ORF26414 - 0.002 18.5 1.3 0.002 18.5 1.3 2.8 2 1 0 2 2 2 1 HMG (high mobility group) box Yae1_N PF09811.9 ORF26414 - 0.11 12.2 2.8 0.2 11.4 0.1 2.2 2 0 0 2 2 2 0 Essential protein Yae1, N terminal XG_FTase PF03254.13 ORF23609 - 0.13 10.8 0.0 0.2 10.2 0.0 1.2 1 0 0 1 1 1 0 Xyloglucan fucosyltransferase Pkinase PF00069.25 ORF204 - 0.00016 21.2 0.0 0.0027 17.1 0.0 2.1 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF204 - 0.083 12.8 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 ORF204 - 0.16 11.2 0.1 0.54 9.5 0.0 1.7 2 0 0 2 2 2 0 Protein tyrosine kinase WaaY PF06176.11 ORF204 - 0.28 10.8 0.0 0.44 10.1 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide core biosynthesis protein (WaaY) ABC_tran PF00005.27 ORF11629 - 1e-29 103.8 0.1 1.8e-29 103.0 0.1 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF11629 - 3.7e-07 30.1 1.9 5.9e-07 29.4 1.9 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF11629 - 1.6e-06 27.7 4.0 8.2e-05 22.1 1.6 2.4 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF11629 - 0.002 18.0 0.2 0.47 10.2 0.0 2.3 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 ORF11629 - 0.003 18.0 0.6 0.88 10.0 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 ORF11629 - 0.0049 16.9 0.6 0.012 15.6 0.5 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF87 PF01935.17 ORF11629 - 0.005 17.0 0.0 0.014 15.5 0.0 1.7 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_24 PF13479.6 ORF11629 - 0.0054 16.5 0.0 0.011 15.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 ORF11629 - 0.031 14.2 1.0 0.1 12.5 0.1 2.1 2 0 0 2 2 2 0 NTPase AAA_18 PF13238.6 ORF11629 - 0.035 14.6 0.0 0.065 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF11629 - 0.042 13.6 0.2 0.18 11.6 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF11629 - 0.051 13.9 0.2 0.2 11.9 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF11629 - 0.061 13.1 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MeaB PF03308.16 ORF11629 - 0.082 11.9 0.0 0.14 11.1 0.0 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB T2SSE PF00437.20 ORF11629 - 0.095 11.7 0.4 0.32 10.0 0.0 2.0 2 1 1 3 3 3 0 Type II/IV secretion system protein DDRGK PF09756.9 ORF11629 - 0.11 12.1 0.3 0.19 11.3 0.3 1.3 1 0 0 1 1 1 0 DDRGK domain AAA_16 PF13191.6 ORF11629 - 0.11 12.8 0.0 0.2 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 ORF11629 - 0.13 11.9 0.0 0.42 10.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF11629 - 0.14 12.6 1.4 0.42 11.1 1.4 1.7 1 1 0 1 1 1 0 AAA domain Peroxin-13_N PF04088.13 ORF107100 - 0.00053 20.3 2.2 0.0038 17.5 0.1 2.5 2 1 1 3 3 3 1 Peroxin 13, N-terminal region DUF3169 PF11368.8 ORF107100 - 0.74 9.3 5.9 1.9 8.0 0.1 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3169) Orf78 PF06024.12 ORF107100 - 1.1 9.6 5.1 7.8 6.9 0.2 2.9 2 1 0 2 2 2 0 Orf78 (ac78) RXT2_N PF08595.11 ORF107100 - 1.5 8.8 8.8 3.7 7.6 5.6 2.3 2 0 0 2 2 2 0 RXT2-like, N-terminal PBP1_TM PF14812.6 ORF107100 - 6.3 7.3 11.1 9.4 6.7 0.4 2.8 2 1 1 3 3 3 0 Transmembrane domain of transglycosylase PBP1 at N-terminal IPP-2 PF04979.14 NODE_12992_length_1228_cov_1343.291702_g9723_i0reverse_frame_2 - 0.021 15.6 2.7 0.021 15.6 2.7 2.2 2 0 0 2 2 2 0 Protein phosphatase inhibitor 2 (IPP-2) zf-ZPR1 PF03367.13 ORF99419 - 2.9e-75 251.5 0.1 2.1e-48 164.2 0.0 2.4 2 0 0 2 2 2 2 ZPR1 zinc-finger domain Abhydrolase_3 PF07859.13 ORF82226 - 8.6e-18 65.0 0.1 2.2e-17 63.6 0.1 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 ORF82226 - 3.4e-07 29.5 0.0 2.1e-06 26.9 0.0 1.9 1 1 0 1 1 1 1 Carboxylesterase family Peptidase_S9 PF00326.21 ORF82226 - 1.8e-06 27.6 0.1 2.4e-05 23.9 0.0 2.1 2 0 0 2 2 2 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF82226 - 2.5e-05 23.7 0.0 0.051 12.8 0.0 2.4 2 0 0 2 2 2 2 Serine aminopeptidase, S33 FSH1 PF03959.13 ORF82226 - 0.00059 19.6 0.0 0.0032 17.2 0.0 1.9 1 1 0 1 1 1 1 Serine hydrolase (FSH1) DLH PF01738.18 ORF82226 - 0.0017 18.0 0.1 0.042 13.4 0.0 2.5 2 1 0 2 2 2 1 Dienelactone hydrolase family Abhydrolase_2 PF02230.16 ORF82226 - 0.017 14.9 0.0 0.082 12.7 0.0 2.0 3 0 0 3 3 3 0 Phospholipase/Carboxylesterase Chlorophyllase2 PF12740.7 ORF82226 - 0.022 13.7 0.0 0.036 13.0 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase enzyme BAAT_C PF08840.11 ORF82226 - 0.033 14.1 0.0 5.8 6.8 0.0 2.2 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_1 PF00561.20 ORF82226 - 0.096 12.3 0.1 2.6 7.6 0.0 2.2 2 0 0 2 2 2 0 alpha/beta hydrolase fold ABC_tran PF00005.27 ORF81989 - 1.6e-33 116.1 0.1 5.6e-33 114.4 0.1 1.9 2 0 0 2 2 2 1 ABC transporter ABC_membrane PF00664.23 ORF81989 - 2.7e-13 50.2 0.9 4.5e-13 49.5 0.9 1.5 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF81989 - 3.5e-10 39.7 1.6 7.1e-07 28.9 0.1 2.7 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF81989 - 8.1e-06 26.2 0.2 7.1e-05 23.1 0.2 2.2 1 1 0 1 1 1 1 AAA domain ABC_ATPase PF09818.9 ORF81989 - 0.00017 20.6 1.4 0.019 13.8 0.1 2.2 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_14 PF13173.6 ORF81989 - 0.00027 21.0 0.1 0.085 12.9 0.1 2.7 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF81989 - 0.0017 18.1 0.1 0.0035 17.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF81989 - 0.0019 18.6 0.0 0.0038 17.6 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF81989 - 0.0021 18.0 0.3 0.046 13.6 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase TniB PF05621.11 ORF81989 - 0.0022 17.5 0.2 0.2 11.1 0.1 2.3 2 0 0 2 2 2 1 Bacterial TniB protein AAA_25 PF13481.6 ORF81989 - 0.0028 17.3 2.0 0.21 11.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF81989 - 0.0036 17.1 0.0 0.0068 16.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain G-alpha PF00503.20 ORF81989 - 0.0041 16.3 0.0 0.0063 15.7 0.0 1.4 1 0 0 1 1 1 1 G-protein alpha subunit AAA PF00004.29 ORF81989 - 0.0068 16.8 0.4 0.3 11.5 0.4 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 ORF81989 - 0.0068 16.1 0.2 0.23 11.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 ORF81989 - 0.014 15.2 0.1 0.48 10.2 0.1 2.3 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system DEAD PF00270.29 ORF81989 - 0.016 15.0 0.1 0.044 13.6 0.1 1.8 1 0 0 1 1 1 0 DEAD/DEAH box helicase SbcCD_C PF13558.6 ORF81989 - 0.017 15.3 0.2 0.2 11.9 0.2 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF4909 PF16253.5 ORF81989 - 0.022 14.6 0.0 0.053 13.3 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4909) DUF87 PF01935.17 ORF81989 - 0.031 14.4 1.3 0.13 12.3 0.3 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain DUF2254 PF10011.9 ORF81989 - 0.033 13.0 0.1 0.05 12.4 0.1 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) AAA_18 PF13238.6 ORF81989 - 0.093 13.3 0.3 0.47 11.0 0.3 2.3 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF81989 - 0.1 13.1 0.1 1.8 9.0 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 ORF81989 - 0.15 11.8 0.9 2.4 7.8 0.1 2.3 2 0 0 2 2 2 0 AAA domain CBP_GIL PF10995.8 ORF81989 - 0.15 10.7 0.0 7.1 5.2 0.0 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis GIL AAA_23 PF13476.6 ORF81989 - 4.9 7.6 6.4 0.43 11.0 0.6 2.1 2 1 1 3 3 3 0 AAA domain Jacalin PF01419.17 ORF77715 - 0.0024 17.8 0.2 9.1 6.2 0.0 4.0 4 0 0 4 4 4 2 Jacalin-like lectin domain Kelch_1 PF01344.25 ORF77715 - 0.079 12.6 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 Kelch motif Phosphorylase PF00343.20 ORF74756 - 4.2e-155 517.9 1.2 5.2e-155 517.6 1.2 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase Pkinase PF00069.25 ORF73690 - 3.9e-52 177.2 0.7 8.3e-52 176.1 0.7 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73690 - 1.1e-24 87.2 0.1 1.7e-24 86.6 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF73690 - 1.9e-06 27.6 1.0 4.5e-06 26.4 1.0 1.6 1 1 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF73690 - 0.00032 19.6 2.0 0.00087 18.2 2.0 1.6 1 1 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF73690 - 0.0011 18.3 0.2 0.076 12.3 0.0 2.3 2 1 0 2 2 2 1 Kinase-like FTA2 PF13095.6 ORF73690 - 0.0022 17.6 0.4 0.029 14.0 0.0 2.2 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF73690 - 0.029 14.3 0.1 0.12 12.3 0.2 1.9 1 1 1 2 2 2 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF73690 - 0.11 11.9 3.3 0.061 12.7 1.0 1.8 2 1 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Cpn60_TCP1 PF00118.24 ORF68905 - 1.8e-104 350.1 17.9 2.1e-104 349.9 17.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Methyltransf_21 PF05050.12 ORF61509 - 2.4e-10 40.7 0.0 4.3e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase FkbM domain Met_10 PF02475.16 ORF61509 - 0.00087 19.1 0.0 0.0014 18.4 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein V_cholerae_RfbT PF05575.11 ORF61509 - 0.0013 18.0 0.0 0.014 14.7 0.0 2.0 2 0 0 2 2 2 1 Vibrio cholerae RfbT protein PCMT PF01135.19 ORF61509 - 0.0026 17.5 0.0 0.0041 16.9 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Pirin_C_2 PF17954.1 ORF61509 - 0.15 12.2 0.0 0.33 11.1 0.0 1.5 1 0 0 1 1 1 0 Quercetinase C-terminal cupin domain Ion_trans PF00520.31 ORF59314 - 2.1e-09 37.0 23.0 2.1e-09 37.0 23.0 3.0 2 1 0 2 2 2 1 Ion transport protein YqgB PF11036.8 ORF59314 - 0.023 14.4 0.5 0.069 12.9 0.5 1.8 1 0 0 1 1 1 0 Virulence promoting factor Nsp1_C PF05064.13 ORF5810 - 1.3e-08 34.6 7.4 2.3e-08 33.8 7.4 1.3 1 0 0 1 1 1 1 Nsp1-like C-terminal region Phage_holin_T PF11031.8 ORF5810 - 0.044 13.3 0.2 0.072 12.6 0.2 1.2 1 0 0 1 1 1 0 Bacteriophage T holin SAPS PF04499.15 ORF49908 - 1.9e-10 40.1 0.8 1.9e-10 40.1 0.8 3.1 2 1 1 3 3 3 2 SIT4 phosphatase-associated protein GAGA_bind PF06217.12 ORF49908 - 1.2 9.4 6.9 1.6 8.9 6.9 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family Use1 PF09753.9 ORF49908 - 5.2 6.7 18.6 13 5.4 18.5 1.7 1 1 0 1 1 1 0 Membrane fusion protein Use1 PCI PF01399.27 ORF49301 - 8.5e-07 29.4 0.0 2.3e-06 28.0 0.0 1.8 1 0 0 1 1 1 1 PCI domain NIF PF03031.18 ORF42568 - 9.1e-20 71.0 0.8 2.3e-19 69.7 0.1 2.0 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase Hydrolase PF00702.26 ORF42568 - 0.0019 18.5 0.0 0.0039 17.5 0.0 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase 5_nucleotid PF05761.14 ORF42568 - 0.0061 15.5 0.1 0.0061 15.5 0.1 2.0 3 0 0 3 3 3 1 5' nucleotidase family HAD_2 PF13419.6 ORF42568 - 0.02 15.0 0.7 0.02 15.0 0.7 1.9 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Trypsin_2 PF13365.6 ORF39959 - 1.9e-29 103.5 0.4 2.9e-29 102.9 0.4 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 ORF39959 - 5.3e-15 55.5 0.0 9.6e-15 54.7 0.0 1.4 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 ORF39959 - 3.4e-12 46.7 0.0 4.9e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 ORF39959 - 1.3e-07 31.3 0.7 7.2e-07 29.0 0.7 2.3 1 1 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF39959 - 0.00036 20.8 0.1 0.001 19.4 0.1 1.8 1 0 0 1 1 1 1 PDZ domain Peptidase_S29 PF02907.15 ORF39959 - 0.011 15.5 0.1 0.022 14.5 0.1 1.5 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease Tricorn_PDZ PF14685.6 ORF39959 - 0.02 14.9 0.0 0.044 13.8 0.0 1.5 1 0 0 1 1 1 0 Tricorn protease PDZ domain Peptidase_S46 PF10459.9 ORF39959 - 0.035 12.8 1.4 0.055 12.1 1.4 1.2 1 0 0 1 1 1 0 Peptidase S46 GRASP55_65 PF04495.14 ORF39959 - 0.14 12.5 0.0 0.27 11.6 0.0 1.4 1 0 0 1 1 1 0 GRASP55/65 PDZ-like domain Peptidase_S7 PF00949.21 ORF39959 - 0.2 11.5 0.7 0.45 10.3 0.7 1.5 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease Peptidase_S32 PF05579.13 ORF39959 - 0.24 10.5 1.5 0.38 9.9 0.5 1.7 2 0 0 2 2 2 0 Equine arteritis virus serine endopeptidase S32 S1-P1_nuclease PF02265.16 ORF37273 - 2.9e-16 60.1 1.6 5.8e-15 55.8 1.6 2.0 1 1 0 1 1 1 1 S1/P1 Nuclease SBP56 PF05694.11 ORF34240 - 5.1e-162 539.8 0.0 5.7e-162 539.6 0.0 1.0 1 0 0 1 1 1 1 56kDa selenium binding protein (SBP56) Lactonase PF10282.9 ORF34240 - 0.016 14.5 0.0 0.15 11.3 0.0 2.0 1 1 0 2 2 2 0 Lactonase, 7-bladed beta-propeller APS_kinase PF01583.20 ORF32889 - 0.18 11.7 0.1 0.3 11.0 0.1 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase Jacalin PF01419.17 ORF27004 - 0.0024 17.8 0.2 9.1 6.2 0.0 4.0 4 0 0 4 4 4 2 Jacalin-like lectin domain Kelch_1 PF01344.25 ORF27004 - 0.079 12.6 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 Kelch motif TMCO5 PF14992.6 ORF14947 - 0.011 15.3 0.1 0.011 15.3 0.1 2.1 3 0 0 3 3 3 0 TMCO5 family SURNod19 PF07712.12 ORF1229 - 1.6e-24 86.4 0.1 2.1e-23 82.7 0.1 2.4 1 1 0 1 1 1 1 Stress up-regulated Nod 19 SET PF00856.28 ORF102646 - 3.6e-20 73.0 1.3 1.6e-18 67.7 0.0 3.0 2 1 0 2 2 2 1 SET domain SBP_bac_3 PF00497.20 NODE_13095_length_1225_cov_2.830252_g9802_i0reverse_frame_2 - 7.3e-31 107.3 0.0 2.5e-25 89.3 0.0 2.1 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 CelTOS PF18659.1 NODE_13095_length_1225_cov_2.830252_g9802_i0reverse_frame_2 - 0.15 12.5 0.1 0.62 10.5 0.0 2.0 2 0 0 2 2 2 0 Cell-traversal protein for ookinetes and sporozoites Tubulin PF00091.25 NODE_13070_length_1225_cov_22781.003361_g6193_i2forward_frame_3 - 2.3e-66 223.8 0.0 3e-66 223.4 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 NODE_13070_length_1225_cov_22781.003361_g6193_i2forward_frame_3 - 4.9e-42 143.1 0.1 8.6e-42 142.3 0.1 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 NODE_13070_length_1225_cov_22781.003361_g6193_i2forward_frame_3 - 0.044 13.5 0.0 0.097 12.3 0.0 1.6 2 0 0 2 2 2 0 Tubulin domain Beta-lactamase PF00144.24 ORF9222 - 8.6e-48 163.3 0.1 1.2e-46 159.5 0.1 1.9 1 1 0 1 1 1 1 Beta-lactamase Aldedh PF00171.22 ORF90671 - 6.2e-157 522.8 0.0 7e-157 522.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Methyltransf_24 PF13578.6 ORF90280 - 4.4e-07 30.9 0.0 8.9e-07 29.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF90280 - 0.13 11.4 0.0 0.19 10.9 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Aldedh PF00171.22 ORF82784 - 6.2e-157 522.8 0.0 7e-157 522.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Metalloenzyme PF01676.18 ORF80201 - 1.1e-32 113.3 0.0 1.8e-32 112.7 0.0 1.3 1 1 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 ORF80201 - 3.1e-05 23.7 0.0 4.2e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase SIS_2 PF13580.6 ORF80201 - 0.044 13.8 0.0 0.081 12.9 0.0 1.3 1 0 0 1 1 1 0 SIS domain DUF1421 PF07223.11 ORF80201 - 0.58 10.0 3.6 1.5 8.7 0.2 2.8 3 0 0 3 3 3 0 UBA-like domain (DUF1421) RAP PF08373.10 ORF69600 - 1.5e-07 31.4 0.0 2.6e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 ORF69600 - 0.002 18.2 0.0 0.0047 17.1 0.0 1.7 1 0 0 1 1 1 1 REase_MTES_1575 BTB PF00651.31 ORF69564 - 7.3e-13 48.7 0.0 1.8e-12 47.5 0.0 1.6 1 0 0 1 1 1 1 BTB/POZ domain GGDEF PF00990.21 ORF56149 - 4.4e-45 153.3 0.4 6.9e-45 152.7 0.4 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain CHASE8 PF17152.4 ORF56149 - 1.6e-30 105.3 0.0 4.4e-30 103.9 0.0 1.8 1 0 0 1 1 1 1 Periplasmic sensor domain Med29 PF11568.8 ORF56149 - 0.0092 16.2 0.0 0.017 15.3 0.0 1.4 1 0 0 1 1 1 1 Mediator complex subunit 29 LapD_MoxY_N PF16448.5 ORF56149 - 0.024 14.5 0.4 0.054 13.4 0.1 1.8 2 0 0 2 2 2 0 LapD/MoxY periplasmic domain AA_permease PF00324.21 ORF54238 - 2.3e-108 362.8 37.8 2.6e-108 362.7 37.8 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF54238 - 7.2e-42 143.7 42.4 8.6e-42 143.4 42.4 1.1 1 0 0 1 1 1 1 Amino acid permease RPE65 PF03055.15 ORF5393 - 4e-81 273.6 0.0 4.8e-81 273.3 0.0 1.0 1 0 0 1 1 1 1 Retinal pigment epithelial membrane protein HATPase_c PF02518.26 ORF52658 - 8.7e-21 74.5 0.9 3e-20 72.8 0.1 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YfhO PF09586.10 ORF52658 - 0.025 12.8 2.9 0.033 12.4 2.9 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Beta-lactamase PF00144.24 ORF51696 - 8.6e-48 163.3 0.1 1.2e-46 159.5 0.1 1.9 1 1 0 1 1 1 1 Beta-lactamase SHMT PF00464.19 ORF49005 - 2.2e-176 586.4 0.0 2.5e-176 586.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 ORF49005 - 0.0016 17.8 0.0 0.0027 17.0 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase Rieske_2 PF13806.6 ORF48157 - 2.5e-13 49.8 0.0 2e-12 46.9 0.0 2.1 1 1 0 1 1 1 1 Rieske-like [2Fe-2S] domain Rieske PF00355.26 ORF48157 - 2.7e-13 49.6 0.0 7e-13 48.3 0.0 1.7 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain zf-met PF12874.7 ORF35997 - 1.5e-12 47.5 8.1 1.7e-10 40.9 5.3 2.5 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF35997 - 6.5e-11 42.2 10.5 2.4e-10 40.4 7.4 2.6 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_2 PF12756.7 ORF35997 - 2.3e-09 37.5 5.9 0.00054 20.3 1.4 3.3 3 0 0 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 ORF35997 - 1.4e-08 34.9 4.3 0.0012 19.5 1.1 3.1 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF35997 - 9e-08 32.2 5.7 0.0038 17.6 2.1 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-DBF PF07535.12 ORF35997 - 0.00014 21.9 3.8 0.00015 21.8 1.6 2.1 2 0 0 2 2 2 1 DBF zinc finger zf-C2H2_6 PF13912.6 ORF35997 - 0.0015 18.5 9.0 0.014 15.4 3.9 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-U1 PF06220.12 ORF35997 - 0.011 15.5 0.5 0.028 14.2 0.5 1.6 1 0 0 1 1 1 0 U1 zinc finger zf-BED PF02892.15 ORF35997 - 0.073 13.1 0.5 9.7 6.3 0.3 2.4 2 0 0 2 2 2 0 BED zinc finger SHMT PF00464.19 ORF33453 - 2.2e-176 586.4 0.0 2.5e-176 586.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 ORF33453 - 0.0016 17.8 0.0 0.0027 17.0 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase EutH PF04346.12 ORF28006 - 2.9e-142 474.0 44.9 3.3e-142 473.8 44.9 1.0 1 0 0 1 1 1 1 Ethanolamine utilisation protein, EutH SHMT PF00464.19 ORF27967 - 2.2e-176 586.4 0.0 2.5e-176 586.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 ORF27967 - 0.0016 17.8 0.0 0.0027 17.0 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase MFS_1 PF07690.16 ORF19592 - 3.2e-13 49.3 39.2 4.3e-13 48.9 39.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1435 PF07256.12 ORF19592 - 0.015 15.3 2.9 0.043 13.9 1.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1435) Piezo_RRas_bdg PF12166.8 ORF105931 - 6.2e-29 101.5 21.5 1.1e-28 100.7 21.3 1.4 1 1 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain Mcm10 PF09332.11 ORF105931 - 1.5 8.2 17.1 2.7 7.3 17.1 1.4 1 0 0 1 1 1 0 Mcm10 replication factor PTR2 PF00854.21 ORF101224 - 3.5e-94 315.9 13.1 4.3e-94 315.6 13.1 1.0 1 0 0 1 1 1 1 POT family MFS_1 PF07690.16 ORF101224 - 8.8e-08 31.4 34.9 8.8e-08 31.4 34.9 2.4 2 1 0 2 2 2 1 Major Facilitator Superfamily Tmemb_14 PF03647.13 ORF101224 - 0.035 14.8 1.0 0.035 14.8 1.0 4.0 4 3 0 4 4 4 0 Transmembrane proteins 14C DUF3094 PF11293.8 ORF101224 - 0.27 11.0 0.9 1.2 9.0 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) DUF3290 PF11694.8 ORF101224 - 0.93 9.5 2.7 0.59 10.1 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) DUF2070 PF09843.9 ORF101224 - 7.2 4.8 11.9 5.2 5.2 10.3 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) TssN PF17555.2 ORF101224 - 8.3 5.7 10.5 0.22 10.9 4.0 1.8 2 0 0 2 2 2 0 Type VI secretion system, TssN SPA PF08616.10 NODE_13195_length_1220_cov_111.302110_g9878_i0reverse_frame_1 - 0.045 13.7 0.9 0.079 12.9 0.9 1.4 1 0 0 1 1 1 0 Stabilization of polarity axis Transp_cyt_pur PF02133.15 ORF9761 - 5.7e-14 51.7 43.4 7.6e-14 51.3 43.4 1.2 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin EF-hand_6 PF13405.6 ORF97326 - 4.8e-05 23.0 0.2 0.00017 21.2 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF97326 - 0.00015 21.1 1.0 0.00047 19.5 1.0 1.9 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF97326 - 0.0026 17.6 0.6 0.0074 16.1 0.6 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF97326 - 0.0037 17.7 0.3 0.009 16.4 0.3 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF97326 - 0.37 10.4 1.3 0.73 9.4 1.3 1.5 1 0 0 1 1 1 0 EF hand Pkinase PF00069.25 ORF88156 - 7.4e-62 209.1 0.0 1.5e-61 208.1 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain EF-hand_1 PF00036.32 ORF88156 - 4.1e-30 101.0 16.2 1.1e-07 30.9 0.1 4.8 4 0 0 4 4 4 4 EF hand Pkinase_Tyr PF07714.17 ORF88156 - 7.4e-30 104.1 0.0 1.2e-29 103.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF88156 - 4.1e-28 97.6 13.4 3.2e-13 49.9 1.3 3.7 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF88156 - 1.8e-25 87.2 12.5 1.4e-06 27.5 0.1 4.9 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF88156 - 1.3e-24 84.0 12.6 8.5e-08 31.5 0.1 5.3 5 0 0 5 5 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF88156 - 9.9e-13 47.7 21.1 9.6e-05 22.2 1.3 5.0 2 1 3 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF88156 - 3.4e-07 30.6 4.2 0.0017 18.7 0.6 2.6 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF88156 - 0.00038 19.9 0.0 0.00071 19.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF88156 - 0.002 18.0 10.9 0.12 12.4 0.5 3.7 2 1 2 4 4 4 2 Cytoskeletal-regulatory complex EF hand PMBR PF09373.10 ORF88156 - 0.0035 17.4 0.0 1.2 9.4 0.0 3.9 3 0 0 3 3 3 1 Pseudomurein-binding repeat EF-hand_11 PF08976.11 ORF88156 - 0.0055 17.6 0.6 7.6 7.5 0.0 3.0 1 1 2 3 3 3 1 EF-hand domain EF-hand_9 PF14658.6 ORF88156 - 0.02 15.2 0.3 0.77 10.1 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain EF-hand_10 PF14788.6 ORF88156 - 0.041 13.8 11.3 0.76 9.7 0.2 5.0 4 1 1 5 5 5 0 EF hand MecA_N PF05223.11 ORF88156 - 0.046 14.0 7.9 6.9 7.0 0.3 4.3 2 1 3 5 5 5 0 NTF2-like N-terminal transpeptidase domain Ku PF02735.16 ORF88156 - 0.16 11.6 1.7 0.4 10.3 1.6 1.8 1 1 0 1 1 1 0 Ku70/Ku80 beta-barrel domain Caleosin PF05042.13 ORF88156 - 0.65 9.9 9.2 15 5.5 0.2 3.9 2 1 2 4 4 4 0 Caleosin related protein PNPase PF03726.14 ORF88156 - 1.5 9.4 5.9 1.5 9.4 0.9 3.2 2 2 0 2 2 2 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain Lip_prot_lig_C PF10437.9 ORF88156 - 1.7 8.7 5.6 3.2 7.8 0.1 3.4 3 2 0 3 3 3 0 Bacterial lipoate protein ligase C-terminus p25-alpha PF05517.12 ORF88156 - 4.3 7.5 10.3 1.8 8.7 0.6 3.7 2 2 2 4 4 4 0 p25-alpha Kri1 PF05178.12 ORF88156 - 4.4 7.9 12.7 4.2 8.0 0.0 3.8 3 1 0 3 3 3 0 KRI1-like family Ion_trans PF00520.31 ORF78721 - 2e-22 79.6 11.1 3e-22 79.1 11.1 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF78721 - 2.2e-07 30.3 0.1 0.007 16.2 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF78721 - 6.9e-06 25.2 1.5 0.12 11.9 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF78721 - 0.00041 20.7 0.1 0.001 19.4 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF78721 - 0.0045 16.4 11.3 0.11 12.0 0.1 4.3 6 0 0 6 6 6 2 EF hand DUF4386 PF14329.6 ORF78721 - 0.025 14.4 0.1 0.025 14.4 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4386) DUF4919 PF16266.5 ORF78721 - 0.047 13.6 0.1 0.26 11.2 0.0 2.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4919) COX4 PF02936.14 ORF78721 - 0.16 12.0 0.1 0.67 10.0 0.1 1.9 2 0 0 2 2 2 0 Cytochrome c oxidase subunit IV EF-hand_8 PF13833.6 ORF78721 - 0.16 11.8 1.0 3.7 7.5 0.1 2.6 2 0 0 2 2 2 0 EF-hand domain pair WD40 PF00400.32 ORF77687 - 4.5e-09 36.8 3.7 0.42 11.6 0.0 6.3 7 0 0 7 7 7 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF77687 - 3.6e-08 33.6 0.0 0.0054 17.0 0.0 4.6 3 1 0 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF77687 - 0.0026 17.1 0.3 0.042 13.2 0.3 2.4 1 1 1 2 2 2 1 WD40-like domain TPK_B1_binding PF04265.14 ORF77687 - 0.023 14.4 0.1 0.29 10.9 0.1 2.3 2 0 0 2 2 2 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Pkinase PF00069.25 ORF77139 - 3.7e-62 210.1 0.0 6e-62 209.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF77139 - 4.2e-31 108.2 0.0 6.2e-31 107.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF77139 - 3.9e-26 88.6 22.3 2.3e-07 29.9 0.3 5.2 5 0 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF77139 - 9e-26 90.1 15.2 2.1e-12 47.3 2.3 3.7 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF77139 - 8e-24 81.5 15.0 7.5e-07 28.6 0.1 5.5 5 0 0 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 ORF77139 - 1.3e-21 75.0 21.4 3.7e-06 26.2 0.2 5.1 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF77139 - 8.4e-15 54.4 23.0 8.4e-06 25.5 1.8 4.9 2 1 3 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF77139 - 6.8e-08 32.8 2.6 0.0017 18.6 0.4 2.5 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF77139 - 0.00014 21.3 0.0 0.00028 20.3 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF77139 - 0.00031 20.7 7.3 0.29 11.1 0.4 3.4 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Kinase-like PF14531.6 ORF77139 - 0.0075 15.6 0.0 0.018 14.4 0.0 1.7 1 1 0 1 1 1 1 Kinase-like PMBR PF09373.10 ORF77139 - 0.024 14.8 0.5 14 6.1 0.0 4.5 5 0 0 5 5 5 0 Pseudomurein-binding repeat APH PF01636.23 ORF77139 - 0.083 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family EF-hand_10 PF14788.6 ORF77139 - 0.33 10.9 8.9 1.1 9.2 0.2 4.5 4 1 1 5 5 5 0 EF hand DUF2666 PF10869.8 ORF77139 - 1.3 9.3 9.2 5.6 7.2 0.7 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2666) Pkinase PF00069.25 ORF7515 - 3.7e-62 210.1 0.0 6e-62 209.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7515 - 4.2e-31 108.2 0.0 6.2e-31 107.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF7515 - 3.9e-26 88.6 22.3 2.3e-07 29.9 0.3 5.2 5 0 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF7515 - 9e-26 90.1 15.2 2.1e-12 47.3 2.3 3.7 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF7515 - 8e-24 81.5 15.0 7.5e-07 28.6 0.1 5.5 5 0 0 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 ORF7515 - 1.3e-21 75.0 21.4 3.7e-06 26.2 0.2 5.1 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF7515 - 8.4e-15 54.4 23.0 8.4e-06 25.5 1.8 4.9 2 1 3 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF7515 - 6.8e-08 32.8 2.6 0.0017 18.6 0.4 2.5 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF7515 - 0.00014 21.3 0.0 0.00028 20.3 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF7515 - 0.00031 20.7 7.3 0.29 11.1 0.4 3.4 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Kinase-like PF14531.6 ORF7515 - 0.0075 15.6 0.0 0.018 14.4 0.0 1.7 1 1 0 1 1 1 1 Kinase-like PMBR PF09373.10 ORF7515 - 0.024 14.8 0.5 14 6.1 0.0 4.5 5 0 0 5 5 5 0 Pseudomurein-binding repeat APH PF01636.23 ORF7515 - 0.083 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family EF-hand_10 PF14788.6 ORF7515 - 0.33 10.9 8.9 1.1 9.2 0.2 4.5 4 1 1 5 5 5 0 EF hand DUF2666 PF10869.8 ORF7515 - 1.3 9.3 9.2 5.6 7.2 0.7 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2666) Pkinase PF00069.25 ORF69243 - 3.7e-62 210.1 0.0 6e-62 209.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF69243 - 4.2e-31 108.2 0.0 6.2e-31 107.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF69243 - 3.9e-26 88.6 22.3 2.3e-07 29.9 0.3 5.2 5 0 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF69243 - 9e-26 90.1 15.2 2.1e-12 47.3 2.3 3.7 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF69243 - 8e-24 81.5 15.0 7.5e-07 28.6 0.1 5.5 5 0 0 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 ORF69243 - 1.3e-21 75.0 21.4 3.7e-06 26.2 0.2 5.1 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF69243 - 8.4e-15 54.4 23.0 8.4e-06 25.5 1.8 4.9 2 1 3 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF69243 - 6.8e-08 32.8 2.6 0.0017 18.6 0.4 2.5 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF69243 - 0.00014 21.3 0.0 0.00028 20.3 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF69243 - 0.00031 20.7 7.3 0.29 11.1 0.4 3.4 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Kinase-like PF14531.6 ORF69243 - 0.0075 15.6 0.0 0.018 14.4 0.0 1.7 1 1 0 1 1 1 1 Kinase-like PMBR PF09373.10 ORF69243 - 0.024 14.8 0.5 14 6.1 0.0 4.5 5 0 0 5 5 5 0 Pseudomurein-binding repeat APH PF01636.23 ORF69243 - 0.083 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family EF-hand_10 PF14788.6 ORF69243 - 0.33 10.9 8.9 1.1 9.2 0.2 4.5 4 1 1 5 5 5 0 EF hand DUF2666 PF10869.8 ORF69243 - 1.3 9.3 9.2 5.6 7.2 0.7 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2666) ORC5_C PF14630.6 ORF68938 - 8.9e-10 38.5 0.2 1.5e-09 37.8 0.2 1.4 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 5 C-terminus p450 PF00067.22 ORF66757 - 3.3e-25 88.8 1.8 5.1e-25 88.1 1.8 1.2 1 0 0 1 1 1 1 Cytochrome P450 RE_MjaI PF09568.10 ORF66757 - 0.041 13.7 0.3 0.11 12.3 0.3 1.7 1 0 0 1 1 1 0 MjaI restriction endonuclease Octopine_DH PF02317.17 ORF5740 - 4.1e-36 124.3 0.0 6e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain ApbA PF02558.16 ORF5740 - 0.00072 19.2 0.0 0.0012 18.5 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Octopine_DH PF02317.17 ORF56119 - 4.1e-36 124.3 0.0 6e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain ApbA PF02558.16 ORF56119 - 0.00072 19.2 0.0 0.0012 18.5 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Ion_trans PF00520.31 ORF5374 - 2e-22 79.6 11.1 3e-22 79.1 11.1 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF5374 - 2.2e-07 30.3 0.1 0.007 16.2 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF5374 - 6.9e-06 25.2 1.5 0.12 11.9 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF5374 - 0.00041 20.7 0.1 0.001 19.4 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF5374 - 0.0045 16.4 11.3 0.11 12.0 0.1 4.3 6 0 0 6 6 6 2 EF hand DUF4386 PF14329.6 ORF5374 - 0.025 14.4 0.1 0.025 14.4 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4386) DUF4919 PF16266.5 ORF5374 - 0.047 13.6 0.1 0.26 11.2 0.0 2.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4919) COX4 PF02936.14 ORF5374 - 0.16 12.0 0.1 0.67 10.0 0.1 1.9 2 0 0 2 2 2 0 Cytochrome c oxidase subunit IV EF-hand_8 PF13833.6 ORF5374 - 0.16 11.8 1.0 3.7 7.5 0.1 2.6 2 0 0 2 2 2 0 EF-hand domain pair TTL PF03133.15 ORF50675 - 1.3e-98 329.8 0.8 1.8e-98 329.3 0.8 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF50675 - 5.3e-07 29.2 0.0 0.00023 20.5 0.0 2.5 2 1 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF50675 - 0.00041 19.7 0.0 0.0042 16.4 0.0 2.4 3 0 0 3 3 3 1 Sugar-transfer associated ATP-grasp Nucleoside_tran PF01733.18 ORF3686 - 4.9e-29 101.7 13.6 3e-28 99.1 13.6 2.0 1 1 0 1 1 1 1 Nucleoside transporter ADH_N PF08240.12 ORF36516 - 4.1e-24 84.5 11.6 7.6e-24 83.7 11.6 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF36516 - 4.8e-16 58.9 0.6 4.8e-16 58.9 0.6 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 ORF36516 - 7.2e-05 22.2 0.0 0.00012 21.5 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 ORF36516 - 0.00017 21.0 0.3 0.00029 20.2 0.3 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ADH_zinc_N_2 PF13602.6 ORF36516 - 0.0018 19.4 0.0 0.0039 18.3 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ApbA PF02558.16 ORF36516 - 0.0054 16.4 0.3 0.01 15.5 0.3 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Pyr_redox PF00070.27 ORF36516 - 0.014 16.0 0.1 0.3 11.7 0.0 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 ORF36516 - 0.071 13.0 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sec23_BS PF08033.12 ORF35912 - 6.5e-19 68.5 0.0 1.6e-18 67.2 0.0 1.7 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain Sec23_helical PF04815.15 ORF35912 - 3.6e-16 58.9 0.9 1.1e-15 57.3 0.9 1.9 1 1 0 1 1 1 1 Sec23/Sec24 helical domain Gelsolin PF00626.22 ORF35912 - 5.6e-09 35.8 0.0 1.7e-08 34.2 0.0 1.8 2 0 0 2 2 2 1 Gelsolin repeat Sec23_trunk PF04811.15 ORF35912 - 0.0029 17.2 0.0 0.0046 16.5 0.0 1.3 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain ALG3 PF05208.13 ORF29827 - 5.3e-126 420.8 27.4 6.2e-126 420.6 27.4 1.0 1 0 0 1 1 1 1 ALG3 protein UPF0370 PF13980.6 ORF29827 - 0.1 12.6 2.4 0.63 10.1 0.9 2.9 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0370) DNA_pol_A_exo1 PF01612.20 ORF28353 - 3.5e-16 59.4 0.0 5.6e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 3'-5' exonuclease Octopine_DH PF02317.17 ORF26388 - 4.1e-36 124.3 0.0 6e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain ApbA PF02558.16 ORF26388 - 0.00072 19.2 0.0 0.0012 18.5 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Ion_trans PF00520.31 ORF22306 - 2e-22 79.6 11.1 3e-22 79.1 11.1 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF22306 - 2.2e-07 30.3 0.1 0.007 16.2 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF22306 - 6.9e-06 25.2 1.5 0.12 11.9 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF22306 - 0.00041 20.7 0.1 0.001 19.4 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF22306 - 0.0045 16.4 11.3 0.11 12.0 0.1 4.3 6 0 0 6 6 6 2 EF hand DUF4386 PF14329.6 ORF22306 - 0.025 14.4 0.1 0.025 14.4 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4386) DUF4919 PF16266.5 ORF22306 - 0.047 13.6 0.1 0.26 11.2 0.0 2.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4919) COX4 PF02936.14 ORF22306 - 0.16 12.0 0.1 0.67 10.0 0.1 1.9 2 0 0 2 2 2 0 Cytochrome c oxidase subunit IV EF-hand_8 PF13833.6 ORF22306 - 0.16 11.8 1.0 3.7 7.5 0.1 2.6 2 0 0 2 2 2 0 EF-hand domain pair Metalloenzyme PF01676.18 ORF19065 - 5e-39 134.2 0.0 7.5e-39 133.6 0.0 1.3 1 1 0 1 1 1 1 Metalloenzyme superfamily Bac_DNA_binding PF00216.21 ORF19065 - 0.11 12.8 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial DNA-binding protein Phosphodiest PF01663.22 ORF19065 - 0.15 11.6 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase Ank_2 PF12796.7 ORF16155 - 8.6e-12 45.5 0.0 2e-11 44.3 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF16155 - 1.4e-10 41.5 0.0 3.1e-10 40.4 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF16155 - 4.9e-10 38.8 0.0 7.5e-05 22.8 0.0 3.6 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_1 PF00583.25 ORF16155 - 1.5e-09 38.1 0.0 6.9e-09 36.0 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF16155 - 9.6e-09 35.3 0.0 2e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ank_5 PF13857.6 ORF16155 - 1.1e-06 28.7 0.0 7.3e-05 23.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_7 PF13508.7 ORF16155 - 2.3e-06 27.9 0.0 1.7e-05 25.2 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF16155 - 5.4e-05 23.1 0.0 0.021 14.8 0.0 3.1 3 0 0 3 3 3 1 FR47-like protein Acetyltransf_CG PF14542.6 ORF16155 - 0.00017 21.6 0.0 0.0005 20.1 0.0 1.8 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Ank PF00023.30 ORF16155 - 0.0011 19.3 0.0 0.015 15.7 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeat AP2 PF00847.20 ORF12278 - 9.4e-05 22.6 7.8 0.047 13.9 1.0 2.7 2 1 0 2 2 2 2 AP2 domain Rotamase PF00639.21 ORF104048 - 2.2e-08 35.0 0.0 8.1e-08 33.1 0.0 2.0 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF104048 - 2.5e-06 28.0 0.0 6.7e-05 23.4 0.0 2.2 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF104048 - 0.00054 20.8 0.2 0.0013 19.5 0.0 1.8 2 0 0 2 2 2 1 PPIC-type PPIASE domain PMG PF05287.12 NODE_13255_length_1217_cov_229.398477_g1699_i2forward_frame_1 - 0.0018 18.3 8.1 0.39 10.7 2.1 2.7 1 1 2 3 3 3 3 PMG protein EF-hand_1 PF00036.32 ORF9963 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF9963 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF9963 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF9963 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF9963 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF9963 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain MIP PF00230.20 ORF98934 - 1.4e-40 139.4 40.6 6.9e-25 88.1 21.8 3.6 1 1 2 3 3 3 3 Major intrinsic protein Glyco_transf_34 PF05637.12 ORF98631 - 4.9e-08 33.0 0.1 0.00022 21.0 0.0 2.2 1 1 1 2 2 2 2 galactosyl transferase GMA12/MNN10 family RRM_1 PF00076.22 ORF98631 - 0.0036 17.1 0.0 0.014 15.2 0.0 1.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) EF-hand_1 PF00036.32 ORF97299 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF97299 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF97299 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF97299 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF97299 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF97299 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain PhzC-PhzF PF02567.16 ORF97284 - 1.3e-52 179.0 0.1 4.6e-52 177.2 0.1 1.7 1 1 0 1 1 1 1 Phenazine biosynthesis-like protein Vps16_C PF04840.12 ORF97177 - 1.6e-23 83.3 16.9 2.2e-23 82.8 16.9 1.2 1 0 0 1 1 1 1 Vps16, C-terminal region Cytokin_check_N PF10407.9 ORF97177 - 0.06 13.3 1.9 0.17 11.9 0.4 2.5 2 0 0 2 2 2 0 Cdc14 phosphatase binding protein N-terminus Dna2 PF08696.11 ORF97177 - 0.21 11.4 4.8 0.17 11.7 1.9 2.2 1 1 1 2 2 2 0 DNA replication factor Dna2 RTT107_BRCT_6 PF16771.5 ORF97177 - 7.5 6.7 9.2 11 6.2 0.0 3.2 3 0 0 3 3 3 0 Regulator of Ty1 transposition protein 107 BRCT domain 3HCDH_N PF02737.18 ORF95806 - 9.1e-56 188.6 0.1 1.3e-55 188.0 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 ORF95806 - 7.5e-36 122.6 1.3 7.5e-26 90.6 0.1 3.1 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Nrap_D5 PF17406.2 ORF95328 - 0.091 12.5 0.8 0.65 9.7 0.1 2.2 2 0 0 2 2 2 0 Nrap protein PAP/OAS1-like domain 5 Cgr1 PF03879.14 ORF95328 - 9.2 6.7 15.2 15 6.0 4.1 2.7 1 1 1 2 2 2 0 Cgr1 family EF-hand_1 PF00036.32 ORF94386 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF94386 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF94386 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF94386 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF94386 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF94386 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF91867 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF91867 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF91867 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF91867 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF91867 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF91867 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF84847 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF84847 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF84847 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF84847 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF84847 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF84847 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF83201 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF83201 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF83201 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF83201 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF83201 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF83201 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain DFP PF04127.15 ORF80315 - 1.9e-73 246.3 3.1 3.4e-73 245.5 0.3 2.1 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 ORF80315 - 2.3e-42 144.4 0.1 3.8e-42 143.7 0.1 1.4 1 0 0 1 1 1 1 Flavoprotein PALP PF00291.25 ORF80315 - 0.078 12.4 1.7 0.099 12.0 0.2 1.9 2 1 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme Glyco_trans_4_4 PF13579.6 ORF80315 - 3 8.3 7.7 5.6 7.4 2.6 2.6 1 1 2 3 3 3 0 Glycosyl transferase 4-like domain EF-hand_1 PF00036.32 ORF80212 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF80212 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF80212 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF80212 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF80212 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF80212 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF80071 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF80071 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF80071 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF80071 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF80071 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF80071 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF73270 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF73270 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF73270 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF73270 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF73270 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF73270 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF72627 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF72627 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF72627 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF72627 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF72627 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF72627 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF66538 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF66538 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF66538 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF66538 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF66538 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF66538 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF65743 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF65743 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF65743 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF65743 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF65743 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF65743 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Pyridoxal_deC PF00282.19 ORF64189 - 8.6e-20 70.8 0.0 1.2e-19 70.2 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Myb_DNA-binding PF00249.31 ORF60932 - 1.4e-13 50.8 0.4 2.6e-13 49.9 0.4 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF60932 - 0.00022 21.4 0.7 0.0011 19.2 0.3 2.4 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF60932 - 0.54 10.2 8.2 0.034 14.0 1.7 2.5 2 1 0 2 2 2 0 Myb DNA-binding like Tombus_movement PF05318.12 ORF60932 - 4.8 8.1 9.5 0.69 10.8 4.2 2.3 2 0 0 2 2 2 0 Tombusvirus movement protein EF-hand_1 PF00036.32 ORF60806 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF60806 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF60806 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF60806 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF60806 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF60806 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF59640 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF59640 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF59640 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF59640 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF59640 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF59640 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain MFS_1 PF07690.16 ORF57706 - 2.2e-22 79.5 25.8 3.3e-22 78.9 25.8 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF5423 PF17461.2 ORF57706 - 5.7 5.7 5.1 2.9 6.7 0.8 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5423) DnaJ PF00226.31 ORF55977 - 3.6e-10 39.8 0.0 8.9e-10 38.6 0.0 1.6 1 0 0 1 1 1 1 DnaJ domain Peptidase_C65 PF10275.9 ORF55977 - 0.13 11.7 0.0 0.26 10.7 0.0 1.5 1 0 0 1 1 1 0 Peptidase C65 Otubain EF-hand_1 PF00036.32 ORF53480 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF53480 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF53480 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF53480 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF53480 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF53480 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF50952 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF50952 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF50952 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF50952 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF50952 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF50952 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Pkinase PF00069.25 ORF50951 - 9.2e-77 258.0 0.2 1.6e-76 257.1 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF50951 - 1.4e-47 162.2 0.0 2.3e-47 161.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF50951 - 4.5e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF50951 - 2.9e-07 30.1 0.0 5.2e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF50951 - 0.00071 19.0 0.0 0.016 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF50951 - 0.012 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF50951 - 0.23 11.4 0.0 0.55 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Amino_oxidase PF01593.24 ORF50576 - 1.8e-48 166.0 0.2 2.3e-48 165.6 0.2 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase EF-hand_1 PF00036.32 ORF45481 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF45481 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF45481 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF45481 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF45481 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF45481 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF45337 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF45337 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF45337 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF45337 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF45337 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF45337 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Fringe PF02434.16 ORF45 - 0.052 13.0 0.4 0.21 11.0 0.4 1.9 1 1 0 1 1 1 0 Fringe-like DUF5546 PF17700.1 ORF45 - 0.055 13.8 0.6 0.98 9.8 0.4 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5546) Pkinase PF00069.25 ORF44482 - 7.7e-41 140.2 0.7 1.5e-40 139.2 0.7 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44482 - 6.7e-25 87.8 0.1 9.9e-25 87.3 0.1 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Myosin_TH1 PF06017.13 ORF44482 - 2.6e-14 53.3 1.3 5e-14 52.4 1.3 1.5 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding Haspin_kinase PF12330.8 ORF44482 - 5.4e-06 25.6 0.2 9e-06 24.9 0.2 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF44482 - 0.00026 20.4 0.1 0.00049 19.5 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF44482 - 0.00052 19.2 2.2 0.0044 16.1 0.0 2.3 2 0 0 2 2 2 1 Seadornavirus VP7 PH_3 PF14593.6 ORF44482 - 0.0007 19.7 0.8 0.0018 18.4 0.8 1.7 1 0 0 1 1 1 1 PH domain APH PF01636.23 ORF44482 - 0.0013 18.7 0.0 0.0027 17.7 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family FTA2 PF13095.6 ORF44482 - 0.012 15.2 0.3 2.2 7.9 0.0 2.4 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 ORF44482 - 0.02 14.5 0.0 0.052 13.1 0.0 1.7 1 0 0 1 1 1 0 RIO1 family Kinase-like PF14531.6 ORF44482 - 0.059 12.7 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Kinase-like WD40 PF00400.32 ORF43728 - 5.6e-09 36.5 1.7 0.013 16.3 0.0 5.5 5 0 0 5 5 5 2 WD domain, G-beta repeat PQQ_3 PF13570.6 ORF43728 - 0.00066 20.1 0.0 1.6 9.3 0.0 4.6 4 1 0 4 4 4 1 PQQ-like domain EF-hand_1 PF00036.32 ORF42182 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF42182 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF42182 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF42182 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF42182 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF42182 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Pkinase PF00069.25 ORF42067 - 1.3e-64 218.1 0.0 1.8e-64 217.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42067 - 8.5e-35 120.3 0.0 1.1e-34 119.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF42067 - 7.4e-05 22.2 0.0 0.00011 21.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF42067 - 0.056 12.4 0.0 0.085 11.8 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain CDC45 PF02724.14 ORF42067 - 6.8 4.9 7.9 7.8 4.6 7.9 1.1 1 0 0 1 1 1 0 CDC45-like protein Pyr_redox_2 PF07992.14 ORF30084 - 1.4e-51 175.4 1.0 2.4e-51 174.7 1.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF30084 - 8.9e-29 100.0 0.1 2.5e-28 98.5 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 ORF30084 - 2.4e-10 40.2 0.1 3.5e-10 39.6 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF30084 - 9.2e-10 39.0 0.7 3.1e-09 37.3 0.7 1.9 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF30084 - 0.022 13.5 0.0 4.3 5.9 0.0 2.2 2 0 0 2 2 2 0 HI0933-like protein Bcl-2_3 PF15286.6 ORF30084 - 0.066 13.9 0.1 0.28 11.9 0.0 2.0 2 0 0 2 2 2 0 Apoptosis regulator M11, B cell 2 leukaemia/lymphoma like BTHB PF18410.1 ORF30084 - 0.19 11.6 0.3 5.4 6.9 0.0 2.9 3 0 0 3 3 3 0 Basic tilted helix bundle domain EF-hand_1 PF00036.32 ORF24380 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF24380 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF24380 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF24380 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF24380 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF24380 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain ketoacyl-synt PF00109.26 ORF23179 - 1.3e-39 136.3 2.4 2e-39 135.7 2.4 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 ORF23179 - 2.8e-30 104.8 0.9 1.1e-29 102.9 0.5 2.2 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 ORF23179 - 0.0004 19.8 0.1 0.00072 19.0 0.1 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain KAsynt_C_assoc PF16197.5 ORF23179 - 0.00057 20.3 0.0 0.001 19.5 0.0 1.4 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension EF-hand_1 PF00036.32 ORF21081 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF21081 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF21081 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF21081 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF21081 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF21081 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Condensation PF00668.20 ORF20790 - 0.1 11.3 0.0 0.15 10.7 0.0 1.2 1 0 0 1 1 1 0 Condensation domain Arc_C PF18162.1 ORF20790 - 0.11 12.4 0.3 14 5.6 0.1 2.8 2 0 0 2 2 2 0 Arc C-lobe EF-hand_1 PF00036.32 ORF17799 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF17799 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF17799 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF17799 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF17799 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF17799 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF11524 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF11524 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF11524 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF11524 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF11524 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF11524 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Ank_2 PF12796.7 ORF112106 - 3.1e-17 62.9 0.2 9.6e-05 22.9 0.0 4.1 1 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF112106 - 8.6e-13 48.2 5.3 0.04 14.3 0.7 5.0 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF112106 - 9.7e-11 40.9 1.0 0.0013 19.1 0.0 5.9 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF112106 - 4.9e-09 36.2 4.2 0.0005 20.4 0.0 4.7 4 1 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF112106 - 1.5e-07 31.8 0.2 0.00016 22.1 0.1 4.7 3 1 3 6 6 6 2 Ankyrin repeats (many copies) EF-hand_1 PF00036.32 ORF111289 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF111289 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF111289 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF111289 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF111289 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF111289 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF109039 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF109039 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF109039 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF109039 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF109039 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF109039 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF105682 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF105682 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF105682 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF105682 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF105682 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF105682 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Pkinase PF00069.25 ORF105681 - 9.2e-77 258.0 0.2 1.6e-76 257.1 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105681 - 1.4e-47 162.2 0.0 2.3e-47 161.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF105681 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF105681 - 2.9e-07 30.1 0.0 5.2e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF105681 - 0.00071 19.0 0.0 0.016 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF105681 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF105681 - 0.23 11.4 0.0 0.55 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_1 PF00036.32 ORF105417 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF105417 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF105417 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF105417 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF105417 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF105417 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF105055 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF105055 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF105055 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF105055 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF105055 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF105055 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EF-hand_1 PF00036.32 ORF102343 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF102343 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF102343 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF102343 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF102343 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF102343 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain PP2C PF00481.21 ORF101850 - 1.6e-56 191.8 0.0 3e-56 190.9 0.0 1.4 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF101850 - 6.8e-10 38.9 0.0 6.8e-10 38.9 0.0 1.9 2 0 0 2 2 2 1 Protein phosphatase 2C LRIF1 PF15741.5 ORF101850 - 2 6.8 6.1 3.1 6.2 6.1 1.2 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 DUF2052 PF09747.9 ORF101850 - 3.8 7.6 13.9 6.5 6.8 13.9 1.3 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) EF-hand_1 PF00036.32 ORF101462 - 6e-07 28.6 13.9 0.0041 16.6 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF101462 - 1.6e-05 24.5 13.0 0.0062 16.4 0.4 3.8 3 1 1 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF101462 - 0.00075 19.9 11.8 0.13 12.7 3.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF101462 - 0.034 13.6 13.5 0.53 9.9 1.2 4.0 4 0 0 4 4 4 0 EF hand EF-hand_8 PF13833.6 ORF101462 - 0.33 10.8 11.9 0.68 9.8 0.5 4.0 5 0 0 5 5 5 0 EF-hand domain pair A2L_zn_ribbon PF08792.10 ORF101462 - 0.99 9.2 4.2 2.2 8.1 4.2 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain Pentapeptide_2 PF01469.18 NODE_13255_length_1217_cov_229.398477_g1699_i2forward_frame_3 - 0.26 11.2 15.6 0.28 11.1 4.8 2.7 1 1 1 2 2 2 0 Pentapeptide repeats (8 copies) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks26.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks26.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks26.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks26.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:55:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SRAP PF02586.14 NODE_60797_length_270_cov_35.068085_g52857_i0forward_frame_2 - 0.14 11.7 0.3 1.5 8.3 0.0 1.9 1 1 1 2 2 2 0 SOS response associated peptidase (SRAP) Golgin_A5 PF09787.9 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.011 15.2 12.8 0.012 15.1 12.8 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 CortBP2 PF09727.9 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.018 15.0 8.4 0.018 15.0 8.4 2.0 1 1 1 2 2 2 0 Cortactin-binding protein-2 UPF0242 PF06785.11 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.045 13.9 11.2 0.05 13.7 11.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Rab5-bind PF09311.11 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.068 12.6 14.4 0.11 11.9 14.4 1.3 1 1 0 1 1 1 0 Rabaptin-like protein DUF473 PF04322.12 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.19 11.6 2.0 0.94 9.3 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF473) LodA_N PF17990.1 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.34 10.8 2.6 0.39 10.6 2.6 1.1 1 0 0 1 1 1 0 L-Lysine epsilon oxidase N-terminal Spc7 PF08317.11 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.39 9.6 16.7 0.48 9.3 16.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein PRKG1_interact PF15898.5 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.47 11.4 16.2 0.59 11.1 16.2 1.1 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain COG2 PF06148.11 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 2 8.5 9.3 1.4 9.0 8.0 1.4 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 LRS4 PF10422.9 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 5.1 6.6 16.0 5.5 6.5 16.0 1.1 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 TPD52 PF04201.15 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 9.6 5.8 17.7 0.2 11.2 6.7 2.0 1 1 1 2 2 2 0 Tumour protein D52 family RHD_DNA_bind PF00554.22 NODE_60792_length_270_cov_46.187234_g52852_i0forward_frame_2 - 0.049 13.6 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Rel homology DNA-binding domain YMF19 PF02326.15 NODE_60784_length_270_cov_58.153191_g52844_i0reverse_frame_3 - 0.22 12.4 3.8 0.29 11.9 3.8 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 Pkinase PF00069.25 NODE_60784_length_270_cov_58.153191_g52844_i0forward_frame_3 - 0.0037 16.7 0.0 0.0044 16.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain SRP40_C PF05022.12 NODE_60783_length_270_cov_60.357447_g52843_i0forward_frame_3 - 0.013 16.3 0.7 0.013 16.3 0.7 1.6 2 0 0 2 2 2 0 SRP40, C-terminal domain DUF1488 PF07369.11 NODE_60776_length_270_cov_66.480851_g52836_i0reverse_frame_3 - 0.067 13.2 0.2 0.076 13.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1488) LacY_symp PF01306.19 NODE_60776_length_270_cov_66.480851_g52836_i0forward_frame_2 - 0.063 12.1 0.6 0.067 12.0 0.6 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter CHD5 PF04420.14 NODE_60775_length_270_cov_66.753191_g52835_i0forward_frame_3 - 0.057 13.3 0.8 0.075 12.9 0.8 1.2 1 0 0 1 1 1 0 CHD5-like protein SASRP1 PF15160.6 NODE_60770_length_270_cov_78.208511_g52830_i0reverse_frame_3 - 0.83 9.3 10.0 0.98 9.0 10.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 MORN PF02493.20 NODE_60766_length_270_cov_87.910638_g52826_i0reverse_frame_3 - 1.4e-08 34.1 16.6 0.00024 20.8 2.4 3.6 4 0 0 4 4 4 3 MORN repeat Integrase_H2C2 PF17921.1 NODE_60765_length_270_cov_89.204255_g52825_i0forward_frame_3 - 0.012 15.7 0.0 0.019 15.1 0.0 1.3 1 0 0 1 1 1 0 Integrase zinc binding domain ATP-synt_8 PF00895.20 NODE_60763_length_270_cov_94.821277_g52823_i0reverse_frame_2 - 0.072 13.6 1.1 0.081 13.4 0.2 1.6 2 0 0 2 2 2 0 ATP synthase protein 8 His_Me_b4a2 PF18275.1 NODE_60763_length_270_cov_94.821277_g52823_i0forward_frame_3 - 0.034 14.2 0.1 0.05 13.7 0.1 1.2 1 0 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain DUF1600 PF07667.11 NODE_60760_length_270_cov_114.902128_g52820_i0reverse_frame_3 - 2.1 8.6 7.3 0.15 12.3 1.1 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF1600) Jacalin PF01419.17 NODE_60760_length_270_cov_114.902128_g52820_i0forward_frame_3 - 9e-07 28.9 0.1 1e-06 28.7 0.1 1.1 1 0 0 1 1 1 1 Jacalin-like lectin domain DNA_RNApol_7kD PF03604.13 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 6.4e-16 57.7 4.9 9.3e-16 57.2 4.9 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_10 PF10058.9 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.014 15.2 0.3 0.1 12.3 0.0 2.1 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-ribbon_3 PF13248.6 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.014 14.8 1.2 0.028 13.8 1.2 1.5 1 1 0 1 1 1 0 zinc-ribbon domain UPF0547 PF10571.9 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.025 14.7 0.6 0.068 13.3 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 MCM_OB PF17207.3 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.03 14.2 0.1 0.037 13.9 0.1 1.1 1 0 0 1 1 1 0 MCM OB domain HypA PF01155.19 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.046 13.7 0.1 0.057 13.5 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.056 13.5 0.2 0.084 12.9 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon Rubredoxin_2 PF18073.1 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.23 11.2 3.8 4.9 7.0 0.4 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zinc_ribbon_13 PF09855.9 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.24 11.6 3.2 0.29 11.3 0.1 2.4 2 1 1 3 3 3 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zinc_ribbon_2 PF13240.6 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.28 10.9 4.1 5.6 6.8 3.9 2.2 1 1 1 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.51 9.9 3.4 1.6 8.3 0.1 2.4 1 1 1 2 2 2 0 TFIIB zinc-binding Mu-like_Com PF10122.9 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 1.7 8.1 5.6 2.3 7.7 0.1 2.7 2 1 1 3 3 3 0 Mu-like prophage protein Com DUF749 PF05370.11 NODE_60754_length_270_cov_173.165957_g52814_i0reverse_frame_2 - 0.011 15.8 2.1 0.017 15.2 1.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF749) DctQ PF04290.12 NODE_60750_length_270_cov_209.885106_g52810_i0forward_frame_3 - 0.35 10.8 2.0 0.71 9.8 0.1 1.9 2 0 0 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component Deltaretro_Tax PF05599.11 NODE_60748_length_270_cov_236.489362_g52808_i0reverse_frame_3 - 0.095 13.2 2.1 0.12 12.9 2.0 1.3 1 1 0 1 1 1 0 Deltaretrovirus Tax protein Nrf1_DNA-bind PF10491.9 NODE_60741_length_270_cov_477.548936_g52801_i0reverse_frame_3 - 0.2 11.3 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 Tme5_EGF_like PF09064.10 NODE_60741_length_270_cov_477.548936_g52801_i0forward_frame_2 - 0.016 15.1 0.9 0.016 15.1 0.9 1.9 2 0 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like TIL PF01826.17 NODE_60741_length_270_cov_477.548936_g52801_i0forward_frame_2 - 0.028 14.7 8.5 0.057 13.7 8.5 1.6 1 1 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain DUF2093 PF09866.9 NODE_60740_length_270_cov_518.838298_g52800_i0reverse_frame_2 - 0.077 12.5 0.2 0.18 11.2 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2093) ecTbetaR2 PF08917.10 NODE_60739_length_270_cov_623.893617_g52799_i0reverse_frame_2 - 0.057 13.4 0.4 0.07 13.1 0.4 1.1 1 0 0 1 1 1 0 Transforming growth factor beta receptor 2 ectodomain Mgr1 PF08602.10 NODE_60739_length_270_cov_623.893617_g52799_i0forward_frame_3 - 0.015 14.1 0.9 0.016 14.1 0.9 1.1 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit zf-MIZ PF02891.20 NODE_60738_length_270_cov_1112.617021_g52798_i0forward_frame_3 - 0.024 14.4 0.9 0.19 11.5 0.3 2.0 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger Ribosomal_L6e_N PF03868.15 NODE_60735_length_270_cov_26693.404255_g52795_i0reverse_frame_2 - 0.023 14.9 0.5 0.023 14.9 0.5 1.9 2 0 0 2 2 2 0 Ribosomal protein L6, N-terminal domain DUF3046 PF11248.8 NODE_60735_length_270_cov_26693.404255_g52795_i0reverse_frame_2 - 0.094 13.1 0.1 0.16 12.3 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3046) VASt PF16016.5 ORF99163 - 0.14 12.6 0.6 0.19 12.2 0.5 1.4 1 1 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain Antimicrobial18 PF08130.11 ORF98671 - 0.088 12.9 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 Type A lantibiotic family 7TMR-DISM_7TM PF07695.11 ORF98360 - 0.018 15.0 2.2 0.02 14.8 2.2 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling PQ-loop PF04193.14 ORF98238 - 0.00095 18.9 0.3 0.00095 18.9 0.3 1.8 2 0 0 2 2 2 1 PQ loop repeat DUF4131 PF13567.6 ORF97878 - 0.085 12.5 0.4 0.11 12.1 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) CMV_1a_C PF12503.8 ORF97434 - 0.0063 16.5 0.0 0.0078 16.2 0.0 1.2 1 0 0 1 1 1 1 Cucumber mosaic virus 1a protein C terminal PCIF1_WW PF12237.8 ORF9729 - 0.14 11.7 0.0 0.17 11.5 0.0 1.0 1 0 0 1 1 1 0 Phosphorylated CTD interacting factor 1 WW domain ParA PF10609.9 ORF97113 - 0.092 12.2 0.0 0.092 12.2 0.0 1.1 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase NAC PF01849.18 ORF96992 - 9.3e-13 47.9 0.1 1.5e-12 47.3 0.1 1.4 1 0 0 1 1 1 1 NAC domain DUF3135 PF11333.8 ORF96758 - 0.07 13.4 0.1 0.088 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) Ank_2 PF12796.7 ORF96186 - 4.3e-11 43.3 0.0 5.6e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF96186 - 3.5e-09 36.7 0.1 3.1e-05 24.2 0.0 2.0 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF96186 - 8.4e-09 35.8 0.0 1e-08 35.5 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF96186 - 1.3e-07 31.8 0.3 0.0022 18.3 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF96186 - 8.7e-06 25.7 0.0 0.015 15.7 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Sedlin_N PF04628.13 ORF95102 - 1e-25 90.4 0.0 1.1e-25 90.3 0.0 1.0 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region Sybindin PF04099.12 ORF95102 - 0.00016 21.6 0.0 0.00017 21.6 0.0 1.0 1 0 0 1 1 1 1 Sybindin-like family AviRa PF11599.8 ORF94503 - 1.3 8.4 2.8 1.7 8.0 2.8 1.1 1 0 0 1 1 1 0 RRNA methyltransferase AviRa Pkinase PF00069.25 ORF93254 - 2.8e-18 66.3 0.2 3e-18 66.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF93254 - 4.1e-07 29.6 0.0 4.1e-07 29.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF5081 PF16887.5 ORF92579 - 0.04 13.0 1.7 0.044 12.8 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5081) DUF4387 PF14330.6 ORF92579 - 0.058 14.1 0.1 0.068 13.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4387) DUF3134 PF11332.8 ORF92066 - 0.16 12.3 0.0 0.25 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3134) Ribosomal_L3 PF00297.22 ORF91977 - 8.2e-22 77.7 0.0 9.9e-22 77.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L3 SR-25 PF10500.9 ORF90742 - 0.0026 17.4 11.3 0.0029 17.3 11.3 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein DUF4653 PF15546.6 ORF90742 - 0.16 11.6 4.9 0.17 11.4 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4653) PAP1 PF08601.10 ORF90742 - 1 9.0 11.2 1 9.0 11.2 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 MMtag PF10159.9 ORF9032 - 0.19 12.0 0.0 0.31 11.3 0.0 1.3 1 0 0 1 1 1 0 Multiple myeloma tumor-associated Corazonin PF17308.2 ORF90113 - 0.066 13.6 0.1 0.074 13.4 0.1 1.1 1 0 0 1 1 1 0 Pro-corazonin Fumble PF03630.14 ORF89798 - 0.059 12.5 0.1 0.063 12.4 0.1 1.0 1 0 0 1 1 1 0 Fumble YadA_anchor PF03895.15 ORF88010 - 5.4e-21 74.5 8.2 5.4e-21 74.5 8.2 1.4 2 0 0 2 2 2 1 YadA-like membrane anchor domain SPDY PF03771.16 ORF87300 - 0.016 15.1 1.2 0.016 15.1 1.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF317) PQ-loop PF04193.14 ORF86790 - 0.00095 18.9 0.3 0.00095 18.9 0.3 1.8 2 0 0 2 2 2 1 PQ loop repeat AsiA PF09010.10 ORF86692 - 0.042 13.9 0.0 0.064 13.4 0.0 1.2 1 0 0 1 1 1 0 Anti-Sigma Factor A INTS5_N PF14837.6 ORF85954 - 0.0028 17.3 0.2 0.0028 17.3 0.2 1.1 1 0 0 1 1 1 1 Integrator complex subunit 5 N-terminus PDEase_I PF00233.19 ORF85135 - 5.8e-24 85.1 1.9 6.1e-24 85.0 1.9 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase VASt PF16016.5 ORF85117 - 7.4e-08 32.9 0.1 9.1e-08 32.7 0.1 1.2 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain DUF1069 PF06370.11 ORF83914 - 0.54 9.8 5.7 0.59 9.7 5.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1069) DUF1882 PF08966.11 ORF83462 - 0.12 12.6 0.1 0.2 11.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1882) TetR_C_14 PF17754.1 ORF82402 - 0.017 15.1 0.2 0.027 14.4 0.0 1.4 2 0 0 2 2 2 0 MftR C-terminal domain XRN_N PF03159.18 ORF82402 - 0.13 11.7 0.2 0.12 11.8 0.2 1.1 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus Ran-binding PF05508.11 ORF81949 - 0.027 13.5 0.5 0.03 13.3 0.5 1.1 1 0 0 1 1 1 0 RanGTP-binding protein Orbi_VP6 PF01516.16 ORF81873 - 0.029 13.9 0.3 0.033 13.7 0.3 1.0 1 0 0 1 1 1 0 Orbivirus helicase VP6 Ribosomal_L3 PF00297.22 ORF81710 - 2.2e-22 79.5 0.0 2.7e-22 79.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L3 DUF4616 PF15394.6 ORF81589 - 0.05 12.6 0.0 0.05 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4616) Hpre_diP_synt_I PF07456.11 ORF81155 - 0.0003 20.8 4.0 0.00039 20.4 4.0 1.1 1 0 0 1 1 1 1 Heptaprenyl diphosphate synthase component I SopD PF11047.8 ORF80645 - 0.058 12.6 0.1 0.063 12.4 0.1 1.1 1 0 0 1 1 1 0 Salmonella outer protein D Ras PF00071.22 ORF79904 - 0.00018 21.2 0.1 0.0002 21.0 0.1 1.1 1 0 0 1 1 1 1 Ras family BPD_transp_1 PF00528.22 ORF79738 - 5.5e-09 36.0 2.7 5.9e-09 35.9 2.7 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Pyr_redox_2 PF07992.14 ORF79659 - 3.1e-08 33.2 0.1 3.5e-08 33.1 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DUF5385 PF17359.2 ORF78999 - 0.05 13.1 0.7 0.053 13.1 0.0 1.3 2 0 0 2 2 2 0 Family of unknown function (DUF5385) Sigma_reg_N PF13800.6 ORF78999 - 0.079 13.3 0.1 0.098 13.0 0.1 1.3 1 1 0 1 1 1 0 Sigma factor regulator N-terminal TMEM208_SND2 PF05620.11 ORF78541 - 0.03 14.1 0.3 0.032 14.0 0.3 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 NICE-1 PF15845.5 ORF7834 - 0.17 12.6 9.5 0.18 12.6 9.1 1.3 1 1 0 1 1 1 0 Cysteine-rich C-terminal 1 family zinc_ribbon_11 PF11682.8 ORF78067 - 0.048 13.7 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Probable zinc-ribbon PCIF1_WW PF12237.8 ORF77746 - 0.14 11.7 0.0 0.17 11.5 0.0 1.0 1 0 0 1 1 1 0 Phosphorylated CTD interacting factor 1 WW domain PMP22_Claudin PF00822.20 ORF77661 - 0.049 13.5 0.2 0.057 13.3 0.2 1.0 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family RecR PF02132.15 ORF77335 - 0.081 12.5 1.4 0.1 12.2 0.7 1.6 2 0 0 2 2 2 0 RecR protein DUF2956 PF11169.8 ORF76853 - 0.48 10.6 9.7 0.089 13.0 5.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2956) Peptidase_C1 PF00112.23 ORF7677 - 5.5e-25 88.7 0.1 5.8e-25 88.7 0.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF7677 - 0.00067 18.6 0.1 0.00076 18.4 0.1 1.0 1 0 0 1 1 1 1 Peptidase C1-like family TERT_thumb PF17984.1 ORF7647 - 0.17 11.8 1.3 0.19 11.6 1.3 1.2 1 0 0 1 1 1 0 Telomerase reverse transcriptase thumb DNA binding domain DUF4579 PF15158.6 ORF76447 - 0.11 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) Ribosomal_L6e PF01159.19 ORF76035 - 1.2 9.7 7.0 1.4 9.4 7.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L6e Tankyrase_bdg_C PF15327.6 ORF75943 - 0.048 14.1 0.1 0.05 14.1 0.1 1.1 1 0 0 1 1 1 0 Tankyrase binding protein C terminal domain PQ-loop PF04193.14 ORF7594 - 0.00095 18.9 0.3 0.00095 18.9 0.3 1.8 2 0 0 2 2 2 1 PQ loop repeat SH3_2 PF07653.17 ORF75314 - 0.16 11.7 0.1 0.2 11.4 0.1 1.3 1 0 0 1 1 1 0 Variant SH3 domain zf-C3HC4_2 PF13923.6 ORF74751 - 1.4 8.9 18.6 2.6 8.0 18.6 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) HK PF02110.15 ORF74650 - 5.8e-32 111.0 0.0 6.3e-32 110.9 0.0 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 ORF74650 - 3.3e-05 23.4 0.0 3.6e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase DUF5529 PF17669.1 ORF74555 - 0.022 14.8 1.3 0.025 14.6 1.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5529) Sgf11 PF08209.11 ORF74239 - 0.016 14.7 0.0 0.039 13.5 0.0 1.6 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) Rad50_zn_hook PF04423.14 ORF74239 - 0.029 14.2 0.4 0.062 13.1 0.4 1.5 1 0 0 1 1 1 0 Rad50 zinc hook motif IQCJ-SCHIP1 PF15157.6 ORF7393 - 0.097 12.5 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif IRS PF02174.17 ORF73738 - 0.16 11.9 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 PTB domain (IRS-1 type) AUX_IAA PF02309.16 ORF73612 - 0.027 14.3 0.2 0.027 14.3 0.2 1.1 1 0 0 1 1 1 0 AUX/IAA family MITF_TFEB_C_3_N PF15951.5 ORF73612 - 0.082 13.5 0.9 0.091 13.4 0.9 1.3 1 1 0 1 1 1 0 MITF/TFEB/TFEC/TFE3 N-terminus DivIC PF04977.15 ORF73071 - 0.0079 16.0 4.8 0.85 9.4 0.8 2.1 2 0 0 2 2 2 2 Septum formation initiator Chibby PF14645.6 ORF73071 - 0.064 13.7 3.2 0.094 13.1 3.2 1.4 1 1 0 1 1 1 0 Chibby family GIT_SHD PF08518.11 ORF73071 - 0.092 12.4 1.4 0.19 11.4 1.4 1.5 1 0 0 1 1 1 0 Spa2 homology domain (SHD) of GIT DUF2508 PF10704.9 ORF73071 - 0.37 11.0 4.3 0.53 10.5 4.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2508) zf-Tim10_DDP PF02953.15 ORF73007 - 0.0082 15.8 1.6 0.019 14.6 1.7 1.6 1 1 1 2 2 2 1 Tim10/DDP family zinc finger Antimicrobial_4 PF08024.11 ORF72276 - 0.14 12.2 0.7 0.36 10.9 0.6 1.8 2 0 0 2 2 2 0 Ant antimicrobial peptide DUF3287 PF11690.8 ORF72038 - 0.035 13.8 0.1 0.05 13.3 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3287) NUDIX PF00293.28 ORF71830 - 0.00034 20.7 0.0 0.00061 19.8 0.0 1.4 1 1 0 1 1 1 1 NUDIX domain Herpes_UL6 PF01763.16 ORF71227 - 0.0052 15.4 0.9 0.0053 15.3 0.9 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like DUF234 PF03008.14 ORF71227 - 0.01 16.3 0.3 0.013 15.9 0.3 1.2 1 0 0 1 1 1 0 Archaea bacterial proteins of unknown function eIF-3c_N PF05470.12 ORF71227 - 0.021 13.1 1.1 0.026 12.8 1.0 1.3 1 1 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus Tap-RNA_bind PF09162.10 ORF71227 - 0.071 13.0 0.4 0.096 12.5 0.4 1.2 1 0 0 1 1 1 0 Tap, RNA-binding PMP22_Claudin PF00822.20 ORF71007 - 0.049 13.5 0.2 0.057 13.3 0.2 1.0 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family Dynein_light PF01221.18 ORF70580 - 2e-31 108.1 0.5 2.2e-31 108.0 0.5 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Ribosomal_L2_C PF03947.18 ORF70577 - 6.4e-16 58.7 5.0 8e-16 58.4 5.0 1.1 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain PTN_MK_C PF01091.18 ORF70536 - 0.31 11.4 4.5 3.6 8.0 0.1 2.1 1 1 1 2 2 2 0 PTN/MK heparin-binding protein family, C-terminal domain Cast PF10174.9 ORF69966 - 0.017 13.4 1.0 0.019 13.3 1.0 1.2 1 0 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone Chibby PF14645.6 ORF69966 - 0.041 14.3 1.5 0.073 13.5 1.5 1.4 1 0 0 1 1 1 0 Chibby family DUF4349 PF14257.6 ORF69966 - 0.14 11.6 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) AadA_C PF18280.1 ORF69128 - 0.054 13.6 0.0 1.2 9.3 0.0 2.0 1 1 1 2 2 2 0 Aminoglycoside adenyltransferase C-terminal domain Promethin PF16015.5 ORF68985 - 0.38 10.7 11.1 0.48 10.4 11.1 1.1 1 0 0 1 1 1 0 Promethin MSP PF01716.18 ORF6852 - 7.6e-27 94.1 0.1 8.3e-27 93.9 0.1 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide Hum_adeno_E3A PF05393.11 ORF68212 - 0.035 14.1 0.2 0.048 13.6 0.2 1.2 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein SbcCD_C PF13558.6 ORF6808 - 0.0048 17.1 0.0 0.0059 16.8 0.0 1.2 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit FERM_M PF00373.18 ORF67037 - 0.0012 19.2 0.1 0.0015 18.9 0.1 1.2 1 0 0 1 1 1 1 FERM central domain PHM7_cyt PF14703.6 ORF67037 - 0.04 14.2 1.0 0.044 14.0 1.0 1.0 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter MMR_HSR1_Xtn PF16897.5 ORF66747 - 0.03 14.3 0.4 0.037 14.0 0.4 1.2 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain DUF4954 PF16314.5 ORF65878 - 0.018 13.2 0.1 0.021 13.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) HSM3_C PF18794.1 ORF65582 - 0.025 14.1 0.5 0.028 14.0 0.5 1.0 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain FDX-ACB PF03147.14 ORF65512 - 0.14 12.6 0.3 0.3 11.5 0.1 1.6 2 0 0 2 2 2 0 Ferredoxin-fold anticodon binding domain TMEM208_SND2 PF05620.11 ORF65321 - 0.03 14.1 0.3 0.032 14.0 0.3 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 DUF3487 PF11990.8 ORF64798 - 0.17 11.8 0.2 2.8 7.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) VRR_NUC PF08774.11 ORF64727 - 0.19 11.8 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 VRR-NUC domain DUF4917 PF16263.5 ORF64082 - 0.0023 17.3 0.0 0.0026 17.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4917) CSD PF00313.22 ORF64082 - 0.093 12.6 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 'Cold-shock' DNA-binding domain DUF3934 PF13070.6 ORF63994 - 0.0083 16.6 0.0 0.014 15.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3934) DUF1972 PF09314.11 ORF63863 - 0.077 12.6 0.1 0.081 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1972) WES_acyltransf PF03007.16 ORF63459 - 9.9e-08 32.1 0.0 1.1e-07 31.9 0.0 1.0 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1685 PF07939.11 ORF62911 - 0.028 14.2 0.0 0.037 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) DUF2070 PF09843.9 ORF62707 - 6.3 5.0 7.7 6.7 4.9 7.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) N2227 PF07942.12 ORF62290 - 0.0039 16.4 0.0 0.0045 16.2 0.0 1.0 1 0 0 1 1 1 1 N2227-like protein DUF2200 PF09966.9 ORF62290 - 0.0044 17.1 0.0 0.0053 16.9 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2200) BBS2_N PF14781.6 ORF62290 - 0.012 15.5 0.0 0.013 15.3 0.0 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Methyltransf_31 PF13847.6 ORF62290 - 0.025 14.4 0.0 0.033 14.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 ORF62290 - 0.047 14.4 0.0 0.071 13.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain BTHB PF18410.1 ORF61672 - 0.065 13.1 0.0 0.096 12.5 0.0 1.2 1 0 0 1 1 1 0 Basic tilted helix bundle domain WD40_4 PF16300.5 ORF61448 - 0.14 12.1 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Type of WD40 repeat Methyltransf_21 PF05050.12 ORF61380 - 0.00063 19.8 0.0 0.0007 19.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain COMM_domain PF07258.14 ORF60126 - 9.6e-09 35.2 0.1 1.2e-08 34.9 0.1 1.2 1 0 0 1 1 1 1 COMM domain CRT-like PF08627.10 ORF59892 - 5.6e-05 22.2 5.7 6.3e-05 22.1 5.7 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like Acyl_transf_3 PF01757.22 ORF59892 - 0.0032 16.6 11.1 0.0037 16.4 11.1 1.0 1 0 0 1 1 1 1 Acyltransferase family EamA PF00892.20 ORF59892 - 0.0088 16.2 8.2 0.012 15.8 8.2 1.2 1 0 0 1 1 1 1 EamA-like transporter family TMEM174 PF15029.6 ORF59892 - 0.085 12.6 0.3 0.091 12.5 0.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 174 DUF5392 PF17370.2 ORF59892 - 0.096 12.8 0.4 0.13 12.3 0.2 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5392) PGPGW PF09656.10 ORF59892 - 0.63 9.6 5.8 3.2 7.3 0.1 2.7 3 0 0 3 3 3 0 Putative transmembrane protein (PGPGW) Phtf-FEM1B_bdg PF12129.8 ORF59892 - 1.5 8.7 5.7 1.8 8.4 5.7 1.1 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor DUF5362 PF17319.2 ORF59892 - 3 7.8 10.2 1.7 8.5 1.3 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF5362) Ran-binding PF05508.11 ORF5902 - 0.027 13.5 0.5 0.03 13.3 0.5 1.1 1 0 0 1 1 1 0 RanGTP-binding protein Pkinase PF00069.25 ORF58113 - 0.00013 21.4 0.0 0.00014 21.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain MatP_C PF17414.2 ORF57133 - 6.5e-32 109.5 1.2 1e-31 108.9 1.2 1.3 1 0 0 1 1 1 1 MatP C-terminal ribbon-helix-helix domain MatP PF06303.12 ORF57133 - 7.2e-10 39.3 3.3 1.1e-09 38.7 1.3 2.0 2 0 0 2 2 2 1 MatP N-terminal domain RHH_4 PF13467.6 ORF57133 - 0.00027 20.7 0.2 0.00041 20.2 0.1 1.4 1 1 0 1 1 1 1 Ribbon-helix-helix domain TMF_TATA_bd PF12325.8 ORF57133 - 0.005 17.1 3.9 0.059 13.6 3.9 2.0 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Seryl_tRNA_N PF02403.22 ORF57133 - 0.12 12.6 5.1 0.36 11.1 5.1 1.7 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain MFS_1 PF07690.16 ORF56675 - 6.8e-11 41.7 4.2 7e-11 41.6 4.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily FXa_inhibition PF14670.6 ORF5617 - 0.063 13.6 1.4 0.091 13.1 1.4 1.2 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site DUF5632 PF18646.1 ORF5615 - 0.019 15.0 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5632) DUF3903 PF13043.6 ORF55741 - 0.16 11.8 0.2 0.22 11.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) RL10P_insert PF17777.1 ORF55675 - 0.0056 16.7 0.0 0.055 13.5 0.0 1.9 2 0 0 2 2 2 1 Insertion domain in 60S ribosomal protein L10P CTP_transf_1 PF01148.20 ORF55446 - 4.3e-30 105.4 5.7 4.8e-30 105.2 5.7 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family CarS-like PF01864.17 ORF55446 - 0.0089 16.0 0.5 0.0091 16.0 0.5 1.1 1 0 0 1 1 1 1 CDP-archaeol synthase DUF4616 PF15394.6 ORF55306 - 0.05 12.6 0.0 0.05 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4616) Myb_DNA-bind_6 PF13921.6 ORF55238 - 5.3e-12 45.8 2.7 7.9e-12 45.3 2.7 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 ORF55238 - 9.7e-12 44.9 3.5 1.3e-11 44.4 3.5 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_4 PF13837.6 ORF55238 - 0.0016 18.7 4.7 0.0016 18.7 4.7 1.7 2 1 0 2 2 2 1 Myb/SANT-like DNA-binding domain HTH_32 PF13565.6 ORF55238 - 0.013 16.1 0.1 0.017 15.8 0.1 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Myb_DNA-bind_2 PF08914.11 ORF55238 - 0.039 14.1 1.2 0.086 13.0 1.2 1.6 1 1 0 1 1 1 0 Rap1 Myb domain SANT_DAMP1_like PF16282.5 ORF55238 - 0.056 13.6 0.5 0.061 13.5 0.5 1.3 1 0 0 1 1 1 0 SANT/Myb-like domain of DAMP1 DinI PF06183.13 ORF54617 - 0.097 13.0 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 DinI-like family BBS1 PF14779.6 ORF54508 - 4.2e-16 59.2 0.4 4.5e-16 59.1 0.4 1.0 1 0 0 1 1 1 1 Ciliary BBSome complex subunit 1 STAS PF01740.21 ORF5445 - 1.1e-05 25.0 0.0 1.4e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 STAS domain BRO1 PF03097.18 ORF54226 - 0.13 11.0 0.0 0.13 11.0 0.0 1.0 1 0 0 1 1 1 0 BRO1-like domain ABC_tran PF00005.27 ORF53387 - 1.6e-07 31.9 0.0 2.6e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AFG1_ATPase PF03969.16 ORF53387 - 0.024 13.6 0.0 0.026 13.4 0.0 1.0 1 0 0 1 1 1 0 AFG1-like ATPase AAA_21 PF13304.6 ORF53387 - 0.075 12.8 0.0 0.089 12.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system DnaJ PF00226.31 ORF53365 - 2.4e-05 24.4 0.0 3.1e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain DUF2273 PF10031.9 ORF53207 - 0.051 13.6 0.8 0.051 13.6 0.8 2.0 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) TraG_N PF07916.11 ORF53207 - 0.46 9.3 4.3 0.54 9.0 4.3 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF4294 PF14127.6 ORF52501 - 0.026 14.4 0.1 0.028 14.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4294) AAA_21 PF13304.6 ORF51754 - 0.0022 17.9 0.0 0.0028 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF51754 - 0.21 11.0 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain PPI_Ypi1 PF07491.11 ORF51727 - 0.37 10.6 2.7 0.61 10.0 2.7 1.4 1 0 0 1 1 1 0 Protein phosphatase inhibitor Asp PF00026.23 ORF51459 - 0.0053 16.2 0.2 0.0057 16.1 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF51459 - 0.033 14.4 0.1 0.04 14.2 0.1 1.1 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal DUF4616 PF15394.6 ORF51125 - 0.05 12.6 0.0 0.05 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4616) O-antigen_lig PF13425.6 ORF48979 - 0.0066 15.3 2.7 0.0074 15.1 2.7 1.0 1 0 0 1 1 1 1 O-antigen ligase like membrane protein 7TM_GPCR_Srab PF10292.9 ORF48979 - 0.067 12.1 4.9 0.077 11.9 4.9 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor Pex24p PF06398.11 ORF48979 - 0.15 11.0 2.5 0.16 11.0 2.5 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin BRE1 PF08647.11 ORF48945 - 3.2e-05 23.9 6.3 3.5e-05 23.8 6.3 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase DUF3450 PF11932.8 ORF48945 - 4.8e-05 22.8 6.0 5.3e-05 22.6 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Spc7 PF08317.11 ORF48945 - 0.00072 18.5 5.9 0.00084 18.3 5.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 ORF48945 - 0.00099 19.6 7.4 0.0012 19.4 7.4 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region Tropomyosin PF00261.20 ORF48945 - 0.0018 17.7 4.8 0.0021 17.5 4.8 1.1 1 0 0 1 1 1 1 Tropomyosin DUF4164 PF13747.6 ORF48945 - 0.0022 18.3 5.1 0.0026 18.0 4.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) Seryl_tRNA_N PF02403.22 ORF48945 - 0.0028 17.8 6.4 0.0035 17.6 6.4 1.1 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain FmiP_Thoc5 PF09766.9 ORF48945 - 0.0038 16.6 1.8 0.0042 16.4 1.8 1.1 1 0 0 1 1 1 1 Fms-interacting protein/Thoc5 YabA PF06156.13 ORF48945 - 0.004 17.8 2.5 0.0047 17.5 2.5 1.1 1 0 0 1 1 1 1 Initiation control protein YabA Muted PF14942.6 ORF48945 - 0.0049 17.2 4.7 0.0056 17.0 4.7 1.0 1 0 0 1 1 1 1 Organelle biogenesis, Muted-like protein TMF_TATA_bd PF12325.8 ORF48945 - 0.0052 17.0 6.3 0.0056 16.9 6.3 1.0 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Atg14 PF10186.9 ORF48945 - 0.0083 15.3 3.0 0.009 15.1 3.0 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3782 PF12644.7 ORF48945 - 0.0096 16.1 1.9 0.016 15.4 1.6 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF3782) FapA PF03961.13 ORF48945 - 0.0098 14.5 4.1 0.011 14.4 4.1 1.0 1 0 0 1 1 1 1 Flagellar Assembly Protein A Tropomyosin_1 PF12718.7 ORF48945 - 0.01 16.0 5.5 0.012 15.8 5.5 1.1 1 0 0 1 1 1 1 Tropomyosin like CEP209_CC5 PF16574.5 ORF48945 - 0.01 16.0 3.6 0.012 15.7 3.6 1.2 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 IFT57 PF10498.9 ORF48945 - 0.011 14.7 4.5 0.012 14.6 4.5 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 JIP_LZII PF16471.5 ORF48945 - 0.011 15.8 4.7 0.011 15.8 4.7 1.8 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II DHR10 PF18595.1 ORF48945 - 0.012 15.7 5.6 0.014 15.5 5.6 1.1 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain HMMR_N PF15905.5 ORF48945 - 0.018 14.5 6.0 0.02 14.4 6.0 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DASH_Dad1 PF08649.10 ORF48945 - 0.02 15.1 0.7 0.02 15.1 0.7 2.5 1 1 2 3 3 3 0 DASH complex subunit Dad1 FemAB PF02388.16 ORF48945 - 0.024 13.5 2.3 0.027 13.3 2.3 1.0 1 0 0 1 1 1 0 FemAB family COG2 PF06148.11 ORF48945 - 0.025 14.6 1.8 0.034 14.2 1.8 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF1664 PF07889.12 ORF48945 - 0.026 14.5 4.2 0.69 10.0 1.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 ORF48945 - 0.033 14.6 1.5 0.044 14.2 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Vta1 PF04652.16 ORF48945 - 0.037 14.0 1.0 0.043 13.8 1.0 1.2 1 0 0 1 1 1 0 Vta1 like SKA2 PF16740.5 ORF48945 - 0.042 13.6 3.4 0.05 13.4 3.4 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 PI3K_P85_iSH2 PF16454.5 ORF48945 - 0.044 13.4 6.9 0.077 12.6 5.9 1.6 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain HemX PF04375.14 ORF48945 - 0.055 12.7 4.3 0.066 12.5 4.3 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Hep_59 PF07052.11 ORF48945 - 0.056 14.2 3.8 0.065 14.0 3.8 1.0 1 0 0 1 1 1 0 Hepatocellular carcinoma-associated antigen 59 Hormone_1 PF00103.20 ORF48945 - 0.056 13.2 1.2 0.063 13.0 1.2 1.1 1 0 0 1 1 1 0 Somatotropin hormone family NPV_P10 PF05531.12 ORF48945 - 0.06 13.8 4.8 0.09 13.3 4.8 1.4 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ABC_tran_CTD PF16326.5 ORF48945 - 0.068 13.4 8.5 0.065 13.5 7.4 1.5 1 1 1 2 2 2 0 ABC transporter C-terminal domain THOC7 PF05615.13 ORF48945 - 0.074 13.3 7.7 0.15 12.4 7.7 1.5 1 1 0 1 1 1 0 Tho complex subunit 7 TMPIT PF07851.13 ORF48945 - 0.084 12.1 3.6 0.096 11.9 3.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein Allexi_40kDa PF05549.11 ORF48945 - 0.091 12.3 1.7 0.1 12.1 1.7 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein CLZ PF16526.5 ORF48945 - 0.1 12.9 5.4 0.42 11.0 3.1 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels CENP-H PF05837.12 ORF48945 - 0.12 12.8 4.8 0.14 12.6 4.8 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Prefoldin PF02996.17 ORF48945 - 0.16 11.9 8.5 0.31 10.9 3.8 2.0 1 1 1 2 2 2 0 Prefoldin subunit DUF724 PF05266.14 ORF48945 - 0.2 11.5 4.8 0.26 11.1 4.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Syntaxin-6_N PF09177.11 ORF48945 - 0.21 12.1 4.3 0.56 10.8 4.4 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF1515 PF07439.11 ORF48945 - 0.23 11.5 1.4 0.28 11.2 1.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) HAUS6_N PF14661.6 ORF48945 - 0.25 10.9 3.2 0.29 10.7 3.2 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus BST2 PF16716.5 ORF48945 - 0.27 11.8 6.1 1.1 9.9 5.8 1.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Spc24 PF08286.11 ORF48945 - 0.32 11.3 7.6 0.76 10.0 7.6 1.6 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 XhlA PF10779.9 ORF48945 - 1.1 9.5 6.3 2.1 8.6 6.2 1.6 1 1 0 1 1 1 0 Haemolysin XhlA DivIC PF04977.15 ORF48945 - 1.9 8.3 7.4 3.9 7.3 7.4 1.7 1 1 0 1 1 1 0 Septum formation initiator DUF4199 PF13858.6 ORF48945 - 3.7 7.9 5.8 5.5 7.4 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Med3 PF11593.8 ORF48735 - 0.95 8.6 5.3 0.95 8.6 5.3 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF1685 PF07939.11 ORF47898 - 0.028 14.2 0.0 0.037 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) V-set_2 PF15910.5 ORF47455 - 0.035 14.2 0.6 0.041 14.0 0.6 1.2 1 0 0 1 1 1 0 ICOS V-set domain TMEM208_SND2 PF05620.11 ORF46405 - 0.03 14.1 0.3 0.032 14.0 0.3 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 TMEM208_SND2 PF05620.11 ORF45994 - 0.03 14.1 0.3 0.032 14.0 0.3 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 RecR PF02132.15 ORF4403 - 0.081 12.5 1.4 0.1 12.2 0.7 1.6 2 0 0 2 2 2 0 RecR protein Glutaredoxin PF00462.24 ORF43730 - 2.3e-12 46.9 0.0 3e-12 46.6 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin NIF PF03031.18 ORF43125 - 2.9e-23 82.4 0.1 3.2e-23 82.2 0.1 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Cyclophil_like2 PF18050.1 ORF42210 - 0.013 15.5 0.2 0.016 15.2 0.2 1.1 1 0 0 1 1 1 0 Cyclophilin-like family Mpv17_PMP22 PF04117.12 ORF42173 - 1.1e-18 67.2 0.9 1.3e-18 66.9 0.9 1.1 1 0 0 1 1 1 1 Mpv17 / PMP22 family DUF2897 PF11446.8 ORF42016 - 0.23 11.4 1.1 0.35 10.8 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) Sigma_reg_C PF13791.6 ORF40392 - 0.0046 17.2 0.7 0.0053 17.0 0.7 1.0 1 0 0 1 1 1 1 Sigma factor regulator C-terminal DUF3116 PF11313.8 ORF40392 - 0.03 14.2 0.2 0.035 13.9 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3116) DUF3565 PF12088.8 ORF40323 - 0.0029 17.5 2.4 0.014 15.3 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3565) Pkinase PF00069.25 ORF39873 - 2.8e-18 66.3 0.2 3e-18 66.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39873 - 4.1e-07 29.6 0.0 4.1e-07 29.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DNA_pol_A_exo1 PF01612.20 ORF39629 - 0.00025 20.8 0.0 0.00034 20.4 0.0 1.2 1 0 0 1 1 1 1 3'-5' exonuclease FAM70 PF14967.6 ORF39629 - 0.083 12.3 0.0 0.087 12.3 0.0 1.0 1 0 0 1 1 1 0 FAM70 protein TPR_12 PF13424.6 ORF39573 - 7.1e-08 32.6 1.3 8.7e-08 32.4 0.1 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF39573 - 2.6e-05 23.9 0.1 2.6e-05 23.9 0.1 2.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF39573 - 3.4e-05 23.6 0.5 0.00021 21.2 0.1 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF39573 - 0.00045 20.7 0.4 0.039 14.6 0.1 2.6 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF39573 - 0.0026 17.7 1.0 0.0091 16.0 0.2 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF39573 - 0.0053 16.9 0.1 0.0053 16.9 0.1 2.2 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF39573 - 0.0075 16.5 0.1 0.0092 16.2 0.1 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 ORF39573 - 0.016 15.1 1.8 0.044 13.7 0.0 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF39573 - 0.033 14.8 0.2 0.13 12.9 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF333 PF03891.15 ORF39573 - 0.052 13.8 0.0 0.077 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF333) eIF-3c_N PF05470.12 ORF39573 - 0.14 10.5 0.0 0.14 10.5 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus DUF2407 PF10302.9 ORF39568 - 0.017 15.6 0.2 0.021 15.4 0.2 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain AAA_21 PF13304.6 ORF39438 - 0.0013 18.6 0.0 0.0022 17.9 0.0 1.4 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 ORF39438 - 0.035 12.8 0.0 0.036 12.7 0.0 1.0 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 ORF39438 - 0.063 13.5 0.2 1.2 9.5 0.1 2.1 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF39438 - 0.11 11.9 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Viral_NABP PF05515.11 ORF38528 - 0.15 11.8 0.1 0.17 11.7 0.1 1.1 1 0 0 1 1 1 0 Viral nucleic acid binding YqeY PF09424.10 ORF38135 - 0.023 14.8 0.3 0.029 14.4 0.3 1.1 1 0 0 1 1 1 0 Yqey-like protein AMMECR1 PF01871.17 ORF38116 - 3.1e-17 62.7 0.0 3.4e-17 62.6 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 ThrE_2 PF12821.7 ORF38070 - 0.79 9.9 6.9 1.6 8.9 6.9 1.5 1 1 0 1 1 1 0 Threonine/Serine exporter, ThrE Tex_N PF09371.10 ORF38043 - 0.055 13.1 3.6 0.07 12.8 3.6 1.1 1 0 0 1 1 1 0 Tex-like protein N-terminal domain Ribosomal_L30 PF00327.20 ORF3776 - 0.029 14.3 0.2 0.68 9.9 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein L30p/L7e SdrG_C_C PF10425.9 ORF37394 - 0.0061 16.7 0.6 0.0068 16.5 0.6 1.1 1 0 0 1 1 1 1 C-terminus of bacterial fibrinogen-binding adhesin DUF371 PF04027.13 ORF37394 - 0.086 12.8 0.1 0.099 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF371) YdaS_antitoxin PF15943.5 ORF37332 - 0.00076 19.3 0.1 0.001 18.9 0.1 1.2 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Tankyrase_bdg_C PF15327.6 ORF37166 - 0.048 14.1 0.1 0.05 14.1 0.1 1.1 1 0 0 1 1 1 0 Tankyrase binding protein C terminal domain Oxysterol_BP PF01237.18 ORF37118 - 9.7e-08 31.2 0.5 9.9e-08 31.2 0.5 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Omega_Repress PF07764.11 ORF37118 - 0.032 14.8 0.0 0.044 14.3 0.0 1.2 1 0 0 1 1 1 0 Omega Transcriptional Repressor TPR_10 PF13374.6 ORF37096 - 9e-05 22.2 0.3 0.28 11.1 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat UPF0047 PF01894.17 ORF36975 - 2.2e-26 92.3 0.0 2.4e-26 92.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 AAA_27 PF13514.6 ORF36551 - 0.075 12.6 0.1 0.087 12.4 0.1 1.1 1 0 0 1 1 1 0 AAA domain WD40 PF00400.32 ORF36518 - 1.1e-05 26.1 0.0 1.8e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF36518 - 0.0013 17.8 0.0 0.0014 17.7 0.0 1.0 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein DUF3254 PF11630.8 ORF36291 - 0.11 12.6 0.2 0.2 11.9 0.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3254) Ribosomal_S3_C PF00189.20 ORF34815 - 5.2e-06 26.9 0.1 6.7e-06 26.5 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain ROS_MUCR PF05443.11 ORF34336 - 0.11 12.5 0.7 0.12 12.4 0.7 1.1 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein DUF5433 PF17498.2 ORF33162 - 0.079 13.2 0.7 0.12 12.6 0.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5433) RCR PF12273.8 ORF3080 - 0.007 17.0 0.1 0.0078 16.9 0.1 1.0 1 0 0 1 1 1 1 Chitin synthesis regulation, resistance to Congo red BRI3BP PF14965.6 ORF3067 - 0.072 12.6 0.1 0.085 12.4 0.1 1.0 1 0 0 1 1 1 0 Negative regulator of p53/TP53 Ribosomal_S15 PF00312.22 ORF2966 - 2.6e-38 130.1 1.5 2.9e-38 129.9 1.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S15 FliJ PF02050.16 ORF2966 - 0.027 14.7 0.3 0.031 14.5 0.3 1.0 1 0 0 1 1 1 0 Flagellar FliJ protein Stirrup PF09061.6 ORF2966 - 0.1 12.8 0.3 0.13 12.4 0.3 1.2 1 1 0 1 1 1 0 Stirrup Tetraspanin PF00335.20 ORF28744 - 0.53 10.0 1.9 0.55 9.9 1.9 1.0 1 0 0 1 1 1 0 Tetraspanin family Ac81 PF05820.11 ORF28737 - 0.12 12.0 7.1 0.13 11.8 7.1 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 CMD PF02627.20 ORF28447 - 0.14 12.2 0.0 0.74 9.9 0.0 1.9 1 1 1 2 2 2 0 Carboxymuconolactone decarboxylase family TRA-1_regulated PF02343.16 ORF27923 - 0.11 12.5 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 TRA-1 regulated protein R03H10.4 Response_reg PF00072.24 ORF27369 - 4.6e-16 59.0 0.0 5e-16 58.9 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain HnRNP_M PF11532.8 ORF27369 - 0.034 14.3 0.1 0.056 13.7 0.1 1.3 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein M Ribosomal_L30 PF00327.20 ORF27258 - 0.029 14.3 0.2 0.68 9.9 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein L30p/L7e Tic110 PF16940.5 ORF27149 - 0.066 11.7 0.0 0.075 11.5 0.0 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter Bac_DNA_binding PF00216.21 ORF25914 - 5.9e-05 23.2 0.1 7.8e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein KdgT PF03812.13 ORF25586 - 0.054 12.8 0.2 0.065 12.6 0.2 1.0 1 0 0 1 1 1 0 2-keto-3-deoxygluconate permease bHLH-MYC_N PF14215.6 ORF25463 - 0.029 14.7 1.7 0.03 14.6 1.7 1.1 1 0 0 1 1 1 0 bHLH-MYC and R2R3-MYB transcription factors N-terminal AnfG_VnfG PF03139.15 ORF25463 - 0.34 11.0 7.3 0.42 10.7 7.3 1.1 1 0 0 1 1 1 0 Vanadium/alternative nitrogenase delta subunit CRIM PF16978.5 ORF24895 - 0.00072 19.7 0.1 0.00072 19.7 0.1 1.0 1 0 0 1 1 1 1 SAPK-interacting protein 1 (Sin1), middle CRIM domain Dynein_light PF01221.18 ORF24454 - 8.3e-43 144.6 2.1 9.2e-43 144.5 2.1 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 PRC PF05239.16 ORF24268 - 0.048 13.7 0.0 0.072 13.2 0.0 1.3 1 0 0 1 1 1 0 PRC-barrel domain TERT_thumb PF17984.1 ORF23972 - 0.17 11.8 1.3 0.19 11.6 1.3 1.2 1 0 0 1 1 1 0 Telomerase reverse transcriptase thumb DNA binding domain Apt1 PF10351.9 ORF22917 - 0.05 12.5 0.1 0.052 12.4 0.1 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF627 PF04781.12 ORF22917 - 0.081 12.9 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF627) PQ-loop PF04193.14 ORF2247 - 0.00095 18.9 0.3 0.00095 18.9 0.3 1.8 2 0 0 2 2 2 1 PQ loop repeat Oxysterol_BP PF01237.18 ORF22340 - 9.7e-08 31.2 0.5 9.9e-08 31.2 0.5 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Omega_Repress PF07764.11 ORF22340 - 0.032 14.8 0.0 0.044 14.3 0.0 1.2 1 0 0 1 1 1 0 Omega Transcriptional Repressor FA_FANCE PF11510.8 ORF21198 - 0.084 12.2 0.1 0.086 12.2 0.1 1.1 1 0 0 1 1 1 0 Fanconi Anaemia group E protein FANCE CMV_1a_C PF12503.8 ORF2118 - 0.0063 16.5 0.0 0.0078 16.2 0.0 1.2 1 0 0 1 1 1 1 Cucumber mosaic virus 1a protein C terminal PHD PF00628.29 ORF20519 - 0.011 15.6 2.8 0.011 15.6 2.8 1.8 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF20519 - 0.23 11.7 6.8 0.34 11.1 6.8 1.3 1 0 0 1 1 1 0 B-box zinc finger Arrestin_N PF00339.29 ORF20429 - 0.0011 19.1 0.0 0.0012 18.9 0.0 1.3 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Cyclophil_like2 PF18050.1 ORF19280 - 0.013 15.5 0.2 0.016 15.2 0.2 1.1 1 0 0 1 1 1 0 Cyclophilin-like family Sensor PF13796.6 ORF19207 - 0.12 12.4 2.4 0.14 12.2 2.4 1.1 1 0 0 1 1 1 0 Putative sensor PT PF04886.12 ORF18753 - 3.1 7.4 15.9 0.25 10.9 8.4 2.6 2 1 0 2 2 2 0 PT repeat Ran-binding PF05508.11 ORF18726 - 0.027 13.5 0.5 0.03 13.3 0.5 1.1 1 0 0 1 1 1 0 RanGTP-binding protein Pyr_redox_2 PF07992.14 ORF18656 - 0.022 14.0 2.6 0.026 13.8 2.6 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF18656 - 0.03 13.0 2.5 0.032 12.9 2.5 1.1 1 0 0 1 1 1 0 HI0933-like protein Thi4 PF01946.17 ORF18656 - 0.098 11.9 0.7 0.11 11.7 0.7 1.1 1 0 0 1 1 1 0 Thi4 family FAD_binding_2 PF00890.24 ORF18656 - 0.13 11.3 5.7 0.16 11.0 5.7 1.1 1 0 0 1 1 1 0 FAD binding domain Methyltransf_34 PF11312.8 ORF18656 - 0.13 11.4 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase NAD_binding_8 PF13450.6 ORF18656 - 0.46 10.8 2.8 0.68 10.2 2.8 1.3 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 ORF18656 - 1.1 8.6 3.8 1.3 8.3 3.8 1.1 1 0 0 1 1 1 0 FAD dependent oxidoreductase OpuAC PF04069.12 ORF18542 - 1.9e-18 67.0 0.1 2e-18 66.9 0.1 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Memo PF01875.17 ORF18522 - 6.4e-22 78.0 0.0 7e-22 77.9 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein DUF4650 PF15509.6 ORF18397 - 0.013 14.9 0.1 0.013 14.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4650) DUF2680 PF10925.8 ORF18140 - 0.044 13.8 1.1 0.51 10.4 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) KdgM PF06178.13 ORF18140 - 0.057 13.0 0.2 0.065 12.9 0.2 1.0 1 0 0 1 1 1 0 Oligogalacturonate-specific porin protein (KdgM) TP2 PF01254.18 ORF17968 - 0.087 13.4 2.3 0.11 13.2 2.3 1.0 1 0 0 1 1 1 0 Nuclear transition protein 2 bZIP_1 PF00170.21 ORF17432 - 0.014 15.5 2.3 0.014 15.5 2.3 2.0 2 0 0 2 2 2 0 bZIP transcription factor DivIC PF04977.15 ORF17432 - 0.64 9.8 4.4 0.82 9.5 4.1 1.4 1 1 0 1 1 1 0 Septum formation initiator CMD PF02627.20 ORF17213 - 0.14 12.2 0.0 0.74 9.9 0.0 1.9 1 1 1 2 2 2 0 Carboxymuconolactone decarboxylase family Cyclin PF08613.11 ORF17006 - 4.6e-12 46.6 1.0 5.1e-12 46.5 1.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF17006 - 0.00015 21.5 0.4 0.00022 21.0 0.4 1.3 1 1 0 1 1 1 1 Cyclin, N-terminal domain Chordopox_E11 PF06138.12 ORF17006 - 0.029 14.7 0.1 0.034 14.5 0.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus E11 protein YoaP PF14268.6 ORF16915 - 0.049 13.1 0.0 0.075 12.6 0.0 1.3 1 0 0 1 1 1 0 YoaP-like G-gamma PF00631.22 ORF16883 - 0.033 14.2 0.3 0.18 11.8 0.2 2.0 2 0 0 2 2 2 0 GGL domain Lipoprotein_20 PF13942.6 ORF16883 - 0.034 14.1 1.0 0.039 13.9 1.0 1.1 1 0 0 1 1 1 0 YfhG lipoprotein Dynein_light PF01221.18 ORF16804 - 3.2e-42 142.7 2.0 3.5e-42 142.6 2.0 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 SGTA_dimer PF16546.5 ORF16804 - 0.022 14.5 1.1 0.031 14.1 1.1 1.2 1 0 0 1 1 1 0 Homodimerisation domain of SGTA Imm48 PF15574.6 ORF16804 - 0.035 13.9 0.1 0.046 13.5 0.1 1.2 1 0 0 1 1 1 0 Immunity protein 48 Pox_A21 PF05323.12 ORF14802 - 0.23 12.1 5.5 0.32 11.6 5.5 1.3 1 0 0 1 1 1 0 Poxvirus A21 Protein HpuA PF16960.5 ORF14597 - 0.0016 17.7 1.9 0.0019 17.4 1.9 1.0 1 0 0 1 1 1 1 Haemoglobin-haptoglobin utilisation, porphyrin transporter DUF1381 PF07129.11 ORF14408 - 0.13 12.1 0.0 1.3 8.9 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1381) DUF4301 PF14134.6 ORF14097 - 0.022 13.6 0.0 0.023 13.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) Wzz PF02706.15 ORF14017 - 0.081 13.2 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 Chain length determinant protein Pkinase PF00069.25 ORF1386 - 1.2e-20 74.0 0.1 1.3e-20 73.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF1386 - 2.8e-17 62.9 0.0 3.2e-17 62.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF1386 - 6.9e-07 28.5 0.2 7.3e-07 28.4 0.2 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 ORF1386 - 0.0055 15.8 0.0 0.0055 15.8 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pkinase_fungal PF17667.1 ORF1386 - 0.014 14.2 0.1 0.015 14.1 0.1 1.0 1 0 0 1 1 1 0 Fungal protein kinase YukC PF10140.9 ORF1386 - 0.017 14.0 0.1 0.017 13.9 0.1 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC APH PF01636.23 ORF1386 - 0.018 15.0 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF1386 - 0.019 14.5 0.1 0.023 14.3 0.1 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 ORF1386 - 0.052 12.9 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Acylphosphatase PF00708.18 ORF13173 - 0.21 12.0 0.3 0.21 12.0 0.3 2.1 2 1 1 3 3 3 0 Acylphosphatase DUF5385 PF17359.2 ORF12793 - 0.0043 16.7 0.3 0.0064 16.1 0.0 1.4 2 0 0 2 2 2 1 Family of unknown function (DUF5385) Sensor PF13796.6 ORF12793 - 0.11 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative sensor MORN PF02493.20 ORF12548 - 1.6e-18 65.4 19.2 3.8e-08 32.8 0.9 4.2 4 0 0 4 4 4 4 MORN repeat MtrE PF04206.12 ORF12548 - 2.3 7.5 5.0 0.6 9.4 1.4 1.7 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit E # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks270.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks270.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks270.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks270.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PGAP1 PF07819.13 ORF12066 - 0.0021 17.8 0.0 0.0026 17.5 0.0 1.2 1 1 0 1 1 1 1 PGAP1-like protein TrbH PF07283.11 ORF12066 - 0.078 13.2 0.0 0.098 12.8 0.0 1.1 1 0 0 1 1 1 0 Conjugal transfer protein TrbH EamA PF00892.20 ORF11890 - 1.3e-10 41.6 8.8 1.4e-10 41.5 8.8 1.0 1 0 0 1 1 1 1 EamA-like transporter family DUF3357 PF11837.8 ORF11477 - 0.13 12.7 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) UCH PF00443.29 ORF112522 - 2.7e-05 23.8 0.1 2.9e-05 23.7 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Rep_Org_C PF06926.11 ORF112522 - 0.0092 16.3 0.0 0.012 15.9 0.0 1.2 1 0 0 1 1 1 1 Putative replisome organiser protein C-terminus DUF1077 PF06417.12 ORF111600 - 0.073 13.1 0.8 0.093 12.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) COMM_domain PF07258.14 ORF111509 - 9.6e-09 35.2 0.1 1.2e-08 34.9 0.1 1.2 1 0 0 1 1 1 1 COMM domain PARG_cat PF05028.14 ORF111143 - 0.072 12.4 0.1 0.072 12.4 0.1 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) DNA_pol_A_exo1 PF01612.20 ORF110729 - 0.00025 20.8 0.0 0.00034 20.4 0.0 1.2 1 0 0 1 1 1 1 3'-5' exonuclease FAM70 PF14967.6 ORF110729 - 0.083 12.3 0.0 0.087 12.3 0.0 1.0 1 0 0 1 1 1 0 FAM70 protein AdenylateSensor PF16579.5 ORF110248 - 0.02 15.3 1.1 0.023 15.1 1.1 1.1 1 0 0 1 1 1 0 Adenylate sensor of SNF1-like protein kinase Saccharop_dh_N PF04455.12 ORF110248 - 0.044 14.2 0.1 0.068 13.6 0.1 1.3 1 0 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region AAA_28 PF13521.6 ORF110054 - 0.011 16.0 0.0 0.012 15.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain MTES_1575 PF18741.1 ORF110054 - 0.094 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 REase_MTES_1575 Collagen PF01391.18 ORF110030 - 0.021 14.6 3.4 0.021 14.6 3.4 1.5 2 0 0 2 2 2 0 Collagen triple helix repeat (20 copies) CENP-B_dimeris PF09026.10 ORF110030 - 0.11 13.0 1.1 0.13 12.7 1.1 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain FAM35_C PF15793.5 ORF109114 - 0.085 12.2 0.0 0.091 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein family FAM35, C-terminal Redoxin PF08534.10 ORF108995 - 0.0094 15.7 0.0 0.01 15.6 0.0 1.1 1 0 0 1 1 1 1 Redoxin DUF874 PF05917.11 ORF108776 - 7.8 5.4 15.7 8.1 5.4 15.7 1.0 1 0 0 1 1 1 0 Helicobacter pylori protein of unknown function (DUF874) Fumble PF03630.14 ORF108481 - 3.1e-24 85.8 0.2 3.3e-24 85.7 0.2 1.0 1 0 0 1 1 1 1 Fumble Sigma_reg_C PF13791.6 ORF108097 - 0.009 16.2 0.9 0.0096 16.1 0.9 1.0 1 0 0 1 1 1 1 Sigma factor regulator C-terminal DUF4917 PF16263.5 ORF108097 - 0.026 13.9 0.1 0.03 13.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4917) Ribosomal_60s PF00428.19 ORF107498 - 0.06 13.9 3.4 0.064 13.9 3.4 1.2 1 0 0 1 1 1 0 60s Acidic ribosomal protein Dynein_light PF01221.18 ORF107026 - 7.3e-42 141.6 1.4 8.1e-42 141.5 1.4 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Imm48 PF15574.6 ORF107026 - 0.02 14.7 0.2 0.029 14.2 0.2 1.3 1 1 0 1 1 1 0 Immunity protein 48 Memo PF01875.17 ORF10679 - 6.4e-22 78.0 0.0 7e-22 77.9 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein DUF4543 PF15076.6 ORF10631 - 0.055 13.6 2.2 0.076 13.2 1.6 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4543) ADD_ATRX PF17981.1 ORF10631 - 0.18 11.7 1.7 0.43 10.5 0.1 2.3 1 1 2 3 3 3 0 Cysteine Rich ADD domain MORN PF02493.20 ORF106212 - 1.6e-18 65.4 19.2 3.8e-08 32.8 0.9 4.2 4 0 0 4 4 4 4 MORN repeat MtrE PF04206.12 ORF106212 - 2.3 7.5 5.0 0.6 9.4 1.4 1.7 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit E FLYWCH_N PF15423.6 ORF106058 - 0.013 15.6 0.2 0.015 15.4 0.2 1.1 1 0 0 1 1 1 0 FLYWCH-type zinc finger-containing protein Herpes_US9 PF06072.11 ORF105818 - 0.32 10.9 0.7 0.47 10.4 0.7 1.2 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 zf-RING_2 PF13639.6 ORF105431 - 6.7e-10 39.1 10.6 8.7e-10 38.8 10.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF105431 - 4.8e-06 26.8 11.5 5.9e-05 23.3 11.5 2.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF105431 - 2.4e-05 24.2 8.1 3.2e-05 23.8 8.1 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF105431 - 0.0001 22.1 7.1 0.00018 21.3 7.1 1.4 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF105431 - 0.00032 20.5 6.5 0.0005 19.9 6.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF105431 - 0.0014 18.7 6.1 0.0025 17.9 6.1 1.5 1 1 0 1 1 1 1 RING-variant domain zf-RING_11 PF17123.5 ORF105431 - 0.0046 16.7 8.3 0.0046 16.7 8.3 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF105431 - 0.0052 16.8 4.9 0.0052 16.8 4.9 2.1 2 0 0 2 2 2 1 RING-type zinc-finger zf-P11 PF03854.14 ORF105431 - 0.006 16.2 6.9 0.019 14.6 3.3 2.2 2 0 0 2 2 2 1 P-11 zinc finger zf-C3HC4_2 PF13923.6 ORF105431 - 0.006 16.4 11.9 0.029 14.2 11.9 2.0 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF105431 - 0.01 15.7 11.5 0.41 10.5 11.9 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 Baculo_RING PF05883.11 ORF105431 - 0.013 15.5 0.5 0.017 15.1 0.5 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain FANCL_C PF11793.8 ORF105431 - 0.021 15.0 8.5 0.19 12.0 8.5 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain zf-ANAPC11 PF12861.7 ORF105431 - 0.05 13.6 6.7 0.087 12.9 6.7 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF105431 - 0.052 13.2 9.3 0.11 12.1 9.3 1.7 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF105431 - 1.6 9.0 9.4 3.1e+02 1.6 9.3 2.5 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Inhibitor_I78 PF11720.8 ORF104950 - 0.2 11.7 0.9 0.28 11.3 0.8 1.4 1 1 0 1 1 1 0 Peptidase inhibitor I78 family Form_Nir_trans PF01226.17 ORF104867 - 4.6e-20 72.0 4.0 5.1e-20 71.8 4.0 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter CMV_1a_C PF12503.8 ORF10469 - 0.0063 16.5 0.0 0.0078 16.2 0.0 1.2 1 0 0 1 1 1 1 Cucumber mosaic virus 1a protein C terminal PMP22_Claudin PF00822.20 ORF104329 - 0.049 13.5 0.2 0.057 13.3 0.2 1.0 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family EF-hand_1 PF00036.32 ORF104164 - 2.6e-13 48.5 1.9 3.8e-07 29.2 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF104164 - 6e-13 49.0 0.2 7.4e-13 48.8 0.2 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF104164 - 4.2e-12 45.0 0.6 9.7e-08 31.4 0.0 2.4 2 1 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF104164 - 1.9e-09 37.2 0.5 1e-05 25.3 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF104164 - 1.2e-05 24.6 1.7 0.00035 19.9 0.0 2.8 2 1 0 2 2 2 1 EF hand EF-hand_9 PF14658.6 ORF104164 - 0.0001 22.5 0.0 0.00014 22.1 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain Qua1 PF16274.5 ORF104164 - 0.51 10.2 3.8 1.4 8.8 0.4 2.4 2 1 0 2 2 2 0 Qua1 domain DUF1816 PF08846.10 ORF102446 - 0.084 12.9 0.0 0.19 11.8 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1816) DUF1010 PF06231.11 ORF100492 - 0.085 13.4 1.6 0.12 12.9 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) Enterotoxin_HS1 PF08090.11 NODE_62241_length_262_cov_0.973568_g54301_i0forward_frame_1 - 0.14 12.2 0.1 0.2 11.6 0.1 1.2 1 0 0 1 1 1 0 Heat stable E.coli enterotoxin 1 Spo7_2_N PF15407.6 NODE_62237_length_262_cov_1.057269_g54297_i0forward_frame_1 - 0.0085 15.7 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Sporulation protein family 7 PKI PF02827.16 NODE_62236_length_262_cov_1.079295_g54296_i0reverse_frame_1 - 0.1 12.8 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 cAMP-dependent protein kinase inhibitor RMF PF04957.12 NODE_62234_length_262_cov_1.101322_g54294_i0forward_frame_1 - 0.095 12.9 1.4 0.19 12.0 0.4 1.8 2 0 0 2 2 2 0 Ribosome modulation factor DUF4620 PF15399.6 NODE_62233_length_262_cov_1.114537_g54293_i0reverse_frame_1 - 0.024 15.0 1.7 0.031 14.6 1.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4620) cNMP_binding PF00027.29 NODE_62231_length_262_cov_1.162996_g54291_i0reverse_frame_1 - 6.1e-09 35.8 0.0 7.5e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Adeno_E3_14_5 PF04834.12 NODE_62219_length_262_cov_1.405286_g54279_i0reverse_frame_1 - 0.18 12.4 0.5 0.23 12.0 0.5 1.4 1 0 0 1 1 1 0 Early E3 14.5 kDa protein Imm71 PF15602.6 NODE_62219_length_262_cov_1.405286_g54279_i0forward_frame_1 - 0.19 11.8 0.1 0.21 11.6 0.1 1.2 1 0 0 1 1 1 0 Immunity protein 71 HPIH PF13323.6 NODE_62215_length_262_cov_1.431718_g54275_i0forward_frame_1 - 0.06 13.2 0.3 0.074 12.9 0.3 1.1 1 0 0 1 1 1 0 N-terminal domain with HPIH motif ubiquitin PF00240.23 NODE_62213_length_262_cov_1.488987_g54273_i0reverse_frame_1 - 2.9e-05 23.7 0.1 8.3e-05 22.3 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin family HTH_37 PF13744.6 NODE_62211_length_262_cov_1.497797_g54271_i0reverse_frame_1 - 0.14 12.1 0.1 0.26 11.3 0.0 1.5 2 0 0 2 2 2 0 Helix-turn-helix domain NmrA PF05368.13 NODE_62209_length_262_cov_1.515419_g54269_i0forward_frame_1 - 0.085 12.4 0.0 0.091 12.3 0.0 1.1 1 0 0 1 1 1 0 NmrA-like family 60KD_IMP PF02096.20 NODE_62198_length_262_cov_1.687225_g54258_i0forward_frame_1 - 1.9e-23 83.2 1.5 1.9e-23 83.2 1.5 1.7 2 0 0 2 2 2 1 60Kd inner membrane protein Vpu PF00558.19 NODE_62198_length_262_cov_1.687225_g54258_i0forward_frame_1 - 0.015 15.1 0.1 0.019 14.7 0.1 1.3 1 0 0 1 1 1 0 Vpu protein OAD_beta PF03977.13 NODE_62198_length_262_cov_1.687225_g54258_i0forward_frame_1 - 0.11 11.5 0.1 0.13 11.2 0.1 1.0 1 0 0 1 1 1 0 Na+-transporting oxaloacetate decarboxylase beta subunit SEC-C PF02810.15 NODE_62193_length_262_cov_1.788546_g54253_i0reverse_frame_1 - 0.11 12.5 6.1 0.18 11.8 6.1 1.4 1 0 0 1 1 1 0 SEC-C motif Wzz PF02706.15 NODE_62186_length_262_cov_1.903084_g54246_i0reverse_frame_1 - 0.1 12.9 0.2 0.15 12.3 0.2 1.2 1 0 0 1 1 1 0 Chain length determinant protein Orai-1 PF07856.12 NODE_62186_length_262_cov_1.903084_g54246_i0reverse_frame_1 - 1.1 9.0 4.4 1.1 8.9 2.6 1.7 1 1 0 1 1 1 0 Mediator of CRAC channel activity DUF3785 PF12653.7 NODE_62181_length_262_cov_2.004405_g54241_i0forward_frame_1 - 0.0064 16.6 1.7 0.0079 16.3 1.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3785) DUF5099 PF17025.5 NODE_62181_length_262_cov_2.004405_g54241_i0forward_frame_1 - 0.11 12.9 1.7 0.13 12.7 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5099) Peripla_BP_4 PF13407.6 NODE_62173_length_262_cov_2.211454_g54233_i0forward_frame_1 - 1.9e-20 73.5 0.0 2.1e-20 73.4 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 NODE_62173_length_262_cov_2.211454_g54233_i0forward_frame_1 - 0.025 14.2 0.1 0.026 14.2 0.1 1.0 1 0 0 1 1 1 0 Periplasmic binding protein DUF2177 PF09945.9 NODE_62162_length_262_cov_2.488987_g54222_i0forward_frame_1 - 0.033 14.3 0.3 0.047 13.8 0.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2177) DUF4889 PF16230.5 NODE_62158_length_262_cov_2.590308_g54218_i0reverse_frame_1 - 0.081 13.2 0.2 0.12 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4889) Peptidase_C34 PF05413.11 NODE_62158_length_262_cov_2.590308_g54218_i0forward_frame_1 - 0.025 14.8 0.0 0.028 14.7 0.0 1.1 1 0 0 1 1 1 0 Putative closterovirus papain-like endopeptidase B56 PF01603.20 NODE_62156_length_262_cov_2.612335_g54216_i0forward_frame_1 - 1.9e-20 73.2 2.2 2e-20 73.1 2.2 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) DUF1422 PF07226.11 NODE_62152_length_262_cov_2.784141_g54212_i0forward_frame_1 - 0.049 13.6 1.2 0.059 13.4 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) DUF4798 PF16055.5 NODE_62144_length_262_cov_3.061674_g54204_i0reverse_frame_1 - 0.17 12.1 1.9 0.19 12.0 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4798) DUF4027 PF13219.6 NODE_62138_length_262_cov_3.867841_g54198_i0reverse_frame_1 - 0.69 9.8 2.5 7.6 6.5 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4027) RRM_1 PF00076.22 NODE_62132_length_262_cov_16.863436_g54192_i0reverse_frame_1 - 0.0072 16.1 0.2 0.011 15.5 0.2 1.5 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) UBA PF00627.31 NODE_62114_length_262_cov_57.185022_g54174_i0forward_frame_1 - 4e-10 39.4 1.4 6.2e-10 38.8 1.4 1.3 1 0 0 1 1 1 1 UBA/TS-N domain S-antigen PF05756.11 NODE_62108_length_262_cov_71.700441_g54168_i0reverse_frame_1 - 6.6 7.2 12.1 1.8 9.0 2.7 2.1 2 0 0 2 2 2 0 S-antigen protein Methyltransf_30 PF05430.11 NODE_62107_length_262_cov_72.083700_g54167_i0reverse_frame_1 - 0.18 11.7 0.1 0.23 11.3 0.1 1.1 1 0 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase Chlam_OMP3 PF03503.13 NODE_62093_length_262_cov_111.660793_g54153_i0reverse_frame_1 - 0.056 13.8 3.4 1.3 9.4 2.3 2.2 2 1 0 2 2 2 0 Chlamydia cysteine-rich outer membrane protein 3 EF-hand_8 PF13833.6 NODE_62085_length_262_cov_142.577093_g54145_i0reverse_frame_1 - 0.00076 19.3 0.2 0.041 13.7 0.1 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_62085_length_262_cov_142.577093_g54145_i0reverse_frame_1 - 0.0069 16.2 0.2 2.7 8.2 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 NODE_62085_length_262_cov_142.577093_g54145_i0reverse_frame_1 - 0.019 15.4 0.5 0.028 14.9 0.5 1.2 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 NODE_62085_length_262_cov_142.577093_g54145_i0reverse_frame_1 - 0.037 13.6 0.3 1.7 8.4 0.1 2.3 2 0 0 2 2 2 0 EF hand Nepo_coat_C PF03688.14 NODE_62077_length_262_cov_240.969163_g54137_i0reverse_frame_1 - 0.072 12.9 0.0 0.076 12.9 0.0 1.1 1 0 0 1 1 1 0 Nepovirus coat protein, C-terminal domain p450 PF00067.22 NODE_62077_length_262_cov_240.969163_g54137_i0forward_frame_1 - 7.9e-13 48.0 0.0 8.5e-13 47.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 RFXA_RFXANK_bdg PF15289.6 NODE_62074_length_262_cov_291.696035_g54134_i0reverse_frame_1 - 0.21 11.9 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 Regulatory factor X-associated C-terminal binding domain His_biosynth PF00977.21 NODE_62067_length_262_cov_51393.823789_g54127_i0forward_frame_1 - 0.045 13.2 0.1 0.045 13.2 0.1 1.1 1 0 0 1 1 1 0 Histidine biosynthesis protein HycH PF07450.11 NODE_62062_length_263_cov_1.052632_g54122_i0reverse_frame_1 - 0.19 12.1 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 Formate hydrogenlyase maturation protein HycH MFS_1 PF07690.16 NODE_62061_length_263_cov_1.074561_g54121_i0forward_frame_1 - 0.0024 16.8 1.0 0.0031 16.5 1.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4070 PF13282.6 NODE_62058_length_263_cov_1.149123_g54118_i0forward_frame_1 - 0.16 12.1 0.1 0.19 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) ABA_WDS PF02496.16 NODE_62056_length_263_cov_1.206140_g54116_i0reverse_frame_1 - 0.024 15.1 1.3 0.031 14.7 0.3 1.7 2 0 0 2 2 2 0 ABA/WDS induced protein Gln-synt_N PF03951.19 NODE_62042_length_263_cov_1.350877_g54102_i0reverse_frame_1 - 0.049 13.4 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 Glutamine synthetase, beta-Grasp domain UCH PF00443.29 NODE_62041_length_263_cov_1.364035_g54101_i0forward_frame_1 - 6.4e-11 42.2 0.7 7.3e-11 42.1 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_62041_length_263_cov_1.364035_g54101_i0forward_frame_1 - 0.0013 18.4 0.0 0.0016 18.1 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase SRTM1 PF15872.5 NODE_62040_length_263_cov_1.381579_g54100_i0reverse_frame_1 - 0.16 12.1 1.4 0.22 11.7 1.4 1.2 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 zf-C3HC4 PF00097.25 NODE_62040_length_263_cov_1.381579_g54100_i0forward_frame_1 - 0.083 12.8 0.9 0.083 12.8 0.9 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF588 PF04535.12 NODE_62038_length_263_cov_1.390351_g54098_i0forward_frame_1 - 0.018 14.8 0.4 0.022 14.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF588) N-glycanase_N PF09112.10 NODE_62037_length_263_cov_1.403509_g54097_i0reverse_frame_1 - 0.05 13.4 0.0 0.063 13.1 0.0 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, N terminal NrfD_2 PF14589.6 NODE_62034_length_263_cov_1.416667_g54094_i0forward_frame_1 - 0.065 13.2 0.2 0.072 13.1 0.2 1.1 1 0 0 1 1 1 0 Polysulfide reductase DUF1375 PF07119.12 NODE_62034_length_263_cov_1.416667_g54094_i0forward_frame_1 - 0.083 13.3 0.5 0.14 12.5 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1375) TNFR_c6 PF00020.18 NODE_62013_length_263_cov_1.754386_g54073_i0forward_frame_1 - 0.1 13.1 4.7 1.8 9.0 3.2 2.6 1 1 1 2 2 2 0 TNFR/NGFR cysteine-rich region Ephrin_rec_like PF07699.13 NODE_62013_length_263_cov_1.754386_g54073_i0forward_frame_1 - 0.59 9.9 12.9 0.12 12.2 5.3 2.8 2 1 1 3 3 3 0 Putative ephrin-receptor like Lustrin_cystein PF14625.6 NODE_62013_length_263_cov_1.754386_g54073_i0forward_frame_1 - 0.67 10.4 12.9 24 5.4 8.3 3.2 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain DUF4131 PF13567.6 NODE_62009_length_263_cov_1.798246_g54069_i0forward_frame_1 - 3.7 7.2 5.6 4.3 6.9 5.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Indigoidine_A PF04227.12 NODE_62005_length_263_cov_1.912281_g54065_i0reverse_frame_1 - 1.5e-36 126.3 0.2 1.6e-36 126.2 0.2 1.0 1 0 0 1 1 1 1 Indigoidine synthase A like protein DUF1262 PF06880.11 NODE_62005_length_263_cov_1.912281_g54065_i0reverse_frame_1 - 0.12 12.8 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1262) Exo_endo_phos PF03372.23 NODE_61994_length_263_cov_2.153509_g54054_i0reverse_frame_1 - 0.00081 19.0 0.1 0.001 18.6 0.1 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family DUF1364 PF07102.12 NODE_61994_length_263_cov_2.153509_g54054_i0forward_frame_1 - 0.0032 17.3 0.3 0.0038 17.0 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1364) PSI_integrin PF17205.3 NODE_61988_length_263_cov_2.390351_g54048_i0forward_frame_1 - 0.085 12.6 2.2 0.13 12.0 2.2 1.3 1 0 0 1 1 1 0 Integrin plexin domain Urm1 PF09138.11 NODE_61984_length_263_cov_2.583333_g54044_i0forward_frame_1 - 0.068 13.5 0.5 0.099 13.0 0.4 1.3 1 1 0 1 1 1 0 Urm1 (Ubiquitin related modifier) VHL PF01847.16 NODE_61980_length_263_cov_2.710526_g54040_i0reverse_frame_1 - 0.074 13.0 0.4 0.11 12.4 0.4 1.2 1 0 0 1 1 1 0 VHL beta domain FMO-like PF00743.19 NODE_61976_length_263_cov_2.894737_g54036_i0forward_frame_1 - 6.4e-06 24.9 0.0 6.6e-06 24.8 0.0 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 NODE_61976_length_263_cov_2.894737_g54036_i0forward_frame_1 - 0.0027 17.9 0.0 0.0038 17.4 0.0 1.3 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Arm_3 PF16186.5 NODE_61976_length_263_cov_2.894737_g54036_i0forward_frame_1 - 0.062 12.9 0.1 0.087 12.4 0.1 1.3 1 0 0 1 1 1 0 Atypical Arm repeat DUF809 PF05663.11 NODE_61972_length_263_cov_3.135965_g54032_i0reverse_frame_1 - 0.56 10.4 3.2 0.69 10.1 3.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF809) Spc7 PF08317.11 NODE_61972_length_263_cov_3.135965_g54032_i0forward_frame_1 - 0.013 14.4 2.6 0.015 14.2 2.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein CN_hydrolase PF00795.22 NODE_61966_length_263_cov_3.671053_g54026_i0reverse_frame_1 - 7.3e-08 32.1 0.0 8.7e-08 31.8 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF3385 PF11865.8 NODE_61966_length_263_cov_3.671053_g54026_i0reverse_frame_1 - 0.17 11.8 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) BRD4_CDT PF17105.5 NODE_61966_length_263_cov_3.671053_g54026_i0forward_frame_1 - 0.27 10.9 0.2 0.27 10.9 0.2 1.5 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 ABC_tran PF00005.27 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 4.5e-08 33.7 0.2 8.6e-08 32.8 0.1 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 6.6e-05 22.4 0.1 7.3e-05 22.3 0.1 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 0.022 15.0 0.0 0.03 14.6 0.0 1.3 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DEAD PF00270.29 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 0.039 13.7 0.0 0.061 13.1 0.0 1.3 1 1 0 1 1 1 0 DEAD/DEAH box helicase MoaE PF02391.17 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 0.094 13.0 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 MoaE protein DUF5317 PF17248.2 NODE_61965_length_263_cov_3.679825_g54025_i0forward_frame_1 - 0.081 12.9 5.4 0.096 12.7 5.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5317) Pkinase PF00069.25 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 2.2e-25 89.5 1.2 2.4e-25 89.4 1.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 2.1e-12 46.9 0.2 2.4e-12 46.7 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 4.1e-09 36.1 0.4 4.5e-09 36.0 0.4 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 1e-05 25.6 0.0 1.1e-05 25.4 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 3.7e-05 23.4 0.7 4.3e-05 23.2 0.7 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase EcKinase PF02958.20 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.00021 20.7 0.1 0.00022 20.6 0.1 1.1 1 0 0 1 1 1 1 Ecdysteroid kinase RIO1 PF01163.22 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.002 17.7 0.1 0.0022 17.6 0.1 1.1 1 0 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.0033 16.2 0.2 0.0036 16.1 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.0054 16.4 0.1 0.0064 16.1 0.1 1.2 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 DUF1679 PF07914.11 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.0085 15.0 0.1 0.0093 14.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) YrbL-PhoP_reg PF10707.9 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.029 13.9 0.2 0.032 13.8 0.2 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL WaaY PF06176.11 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.036 13.7 0.1 0.039 13.6 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide core biosynthesis protein (WaaY) Kinase-like PF14531.6 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.053 12.8 0.0 0.053 12.8 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Amnionless PF14828.6 NODE_61959_length_263_cov_4.881579_g54019_i0forward_frame_1 - 1.2 7.9 9.5 1.4 7.7 9.5 1.1 1 0 0 1 1 1 0 Amnionless Cadherin_tail PF15974.5 NODE_61954_length_263_cov_25.232456_g54014_i0reverse_frame_1 - 2 8.7 8.5 2.8 8.3 8.5 1.2 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region DUF5066 PF16728.5 NODE_61953_length_263_cov_28.587719_g54013_i0reverse_frame_1 - 0.062 12.6 0.0 0.063 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5066) Holin_BhlA PF10960.8 NODE_61951_length_263_cov_30.592105_g54011_i0reverse_frame_1 - 0.01 15.8 0.1 0.015 15.3 0.1 1.2 1 0 0 1 1 1 0 BhlA holin family TMIE PF16038.5 NODE_61946_length_263_cov_48.837719_g54006_i0reverse_frame_1 - 0.068 13.0 0.2 0.13 12.1 0.2 1.4 1 0 0 1 1 1 0 TMIE protein Imm71 PF15602.6 NODE_61942_length_263_cov_53.482456_g54002_i0reverse_frame_1 - 0.043 13.9 0.0 0.057 13.5 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 71 OEP PF02321.18 NODE_61939_length_263_cov_59.491228_g53999_i0reverse_frame_1 - 0.12 12.2 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Outer membrane efflux protein MORN PF02493.20 NODE_61938_length_263_cov_60.578947_g53998_i0forward_frame_1 - 0.00016 21.4 4.7 0.00025 20.8 4.7 1.3 1 0 0 1 1 1 1 MORN repeat Tudor_FRX1 PF18336.1 NODE_61938_length_263_cov_60.578947_g53998_i0forward_frame_1 - 0.32 11.0 1.0 0.35 10.8 0.1 1.5 2 0 0 2 2 2 0 Fragile X mental retardation Tudor domain Cytochrom_D1 PF02239.16 NODE_61915_length_263_cov_164.320175_g53975_i0reverse_frame_1 - 0.052 12.1 0.1 0.056 12.0 0.1 1.0 1 0 0 1 1 1 0 Cytochrome D1 heme domain TAFA PF12020.8 NODE_61914_length_263_cov_164.596491_g53974_i0forward_frame_1 - 0.071 13.6 2.9 3.9 8.0 1.1 2.1 1 1 1 2 2 2 0 TAFA family MORN PF02493.20 NODE_61909_length_263_cov_254.986842_g53969_i0reverse_frame_1 - 2.2e-21 74.4 31.4 1.1e-06 28.2 2.9 4.1 4 0 0 4 4 4 4 MORN repeat PAP_central PF04928.17 NODE_61908_length_263_cov_295.131579_g53968_i0forward_frame_1 - 0.064 12.2 0.2 0.075 12.0 0.2 1.1 1 0 0 1 1 1 0 Poly(A) polymerase central domain DUF2834 PF11196.8 NODE_61900_length_264_cov_0.947598_g53960_i0reverse_frame_1 - 0.023 15.0 0.3 0.028 14.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2834) PQQ PF01011.21 NODE_61900_length_264_cov_0.947598_g53960_i0forward_frame_1 - 3.1e-05 23.7 0.3 0.0032 17.3 0.0 2.2 2 0 0 2 2 2 2 PQQ enzyme repeat PQQ_3 PF13570.6 NODE_61900_length_264_cov_0.947598_g53960_i0forward_frame_1 - 3.3e-05 24.2 0.0 0.0059 17.1 0.0 2.2 2 0 0 2 2 2 2 PQQ-like domain PQQ_2 PF13360.6 NODE_61900_length_264_cov_0.947598_g53960_i0forward_frame_1 - 0.00012 21.8 0.0 0.00013 21.6 0.0 1.0 1 0 0 1 1 1 1 PQQ-like domain Baculo_p24 PF05073.12 NODE_61894_length_264_cov_1.048035_g53954_i0reverse_frame_1 - 0.069 12.9 0.0 0.093 12.5 0.0 1.2 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Rer1 PF03248.13 NODE_61894_length_264_cov_1.048035_g53954_i0reverse_frame_1 - 0.076 12.7 0.0 0.1 12.3 0.0 1.3 1 1 0 1 1 1 0 Rer1 family MMR_HSR1 PF01926.23 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 5.5e-17 61.9 0.0 6.2e-17 61.7 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 5.3e-08 32.5 0.0 6.6e-08 32.2 0.0 1.1 1 0 0 1 1 1 1 Ferrous iron transport protein B ABC_tran PF00005.27 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.043 14.3 0.0 0.044 14.3 0.0 1.2 1 0 0 1 1 1 0 ABC transporter AAA PF00004.29 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.057 13.8 0.0 0.057 13.8 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Roc PF08477.13 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.069 13.4 0.0 0.077 13.2 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.14 11.6 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family Dynamin_N PF00350.23 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.19 11.8 0.0 0.55 10.3 0.0 1.7 1 1 1 2 2 2 0 Dynamin family PHA_synth_III_E PF09712.10 NODE_61891_length_264_cov_1.144105_g53951_i0forward_frame_1 - 0.084 12.0 0.0 0.084 12.0 0.0 1.1 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) Vps36-NZF-N PF16988.5 NODE_61888_length_264_cov_1.209607_g53948_i0reverse_frame_1 - 0.003 16.9 0.3 0.0044 16.4 0.3 1.4 1 0 0 1 1 1 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain GATase1_like PF07090.11 NODE_61888_length_264_cov_1.209607_g53948_i0reverse_frame_1 - 0.066 12.7 0.1 0.07 12.6 0.1 1.1 1 0 0 1 1 1 0 Putative glutamine amidotransferase zf-RING_2 PF13639.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 4.1e-06 27.0 5.8 4.3e-06 27.0 4.0 1.8 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.00015 22.0 6.5 0.00066 19.9 6.5 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.00017 21.4 3.4 0.00017 21.4 3.4 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.00019 21.0 2.3 0.0003 20.4 2.3 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.00039 20.1 8.6 0.0018 17.9 7.1 2.4 2 0 0 2 2 2 1 RING-like zinc finger FANCL_C PF11793.8 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.0005 20.2 2.3 0.00082 19.5 2.3 1.5 1 0 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.00097 19.2 1.3 0.0018 18.3 1.3 1.5 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4_2 PF13923.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.017 15.0 4.2 0.048 13.5 4.2 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.028 14.4 2.5 0.057 13.4 2.5 1.5 1 0 0 1 1 1 0 zinc-RING finger domain zf-ANAPC11 PF12861.7 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.047 13.7 2.1 0.08 13.0 2.1 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.047 13.7 2.6 0.05 13.6 1.3 1.8 2 1 0 2 2 2 0 RING-type zinc-finger Prok-RING_1 PF14446.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.077 12.9 1.2 0.13 12.2 1.2 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-like PF04071.12 NODE_61885_length_264_cov_1.222707_g53945_i0reverse_frame_1 - 0.03 14.2 0.6 0.03 14.2 0.6 2.0 1 1 1 2 2 2 0 Cysteine-rich small domain Endonuclease_7 PF02945.15 NODE_61885_length_264_cov_1.222707_g53945_i0reverse_frame_1 - 0.044 13.7 2.4 0.046 13.6 2.4 1.1 1 0 0 1 1 1 0 Recombination endonuclease VII IBP39 PF11422.8 NODE_61881_length_264_cov_1.248908_g53941_i0forward_frame_1 - 0.0077 16.0 0.3 0.0083 15.9 0.3 1.2 1 0 0 1 1 1 1 Initiator binding protein 39 kDa DUF2385 PF09539.10 NODE_61881_length_264_cov_1.248908_g53941_i0forward_frame_1 - 0.042 14.4 0.0 0.049 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2385) DUF1726 PF08351.11 NODE_61876_length_264_cov_1.340611_g53936_i0forward_frame_1 - 0.04 13.9 0.1 0.051 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1726) NPCC PF08058.11 NODE_61873_length_264_cov_1.375546_g53933_i0reverse_frame_1 - 0.54 10.3 4.0 0.65 10.1 4.0 1.0 1 0 0 1 1 1 0 Nuclear pore complex component DUF5604 PF18300.1 NODE_61869_length_264_cov_1.445415_g53929_i0forward_frame_1 - 0.096 12.7 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5604) Fer4_24 PF18109.1 NODE_61869_length_264_cov_1.445415_g53929_i0forward_frame_1 - 0.14 12.5 0.0 0.24 11.7 0.0 1.3 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain Dynamin_N PF00350.23 NODE_61865_length_264_cov_1.506550_g53925_i0reverse_frame_1 - 3.8e-16 59.6 0.0 4.1e-16 59.5 0.0 1.0 1 0 0 1 1 1 1 Dynamin family Glutaredoxin2_C PF04399.13 NODE_61865_length_264_cov_1.506550_g53925_i0reverse_frame_1 - 0.17 11.7 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain ERGIC_N PF13850.6 NODE_61857_length_264_cov_1.620087_g53917_i0reverse_frame_1 - 0.027 14.8 0.1 0.029 14.7 0.1 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) CR6_interact PF10147.9 NODE_61854_length_264_cov_1.681223_g53914_i0reverse_frame_1 - 0.036 13.8 0.0 0.044 13.5 0.0 1.1 1 0 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 DNA_pol_viral_C PF00336.18 NODE_61854_length_264_cov_1.681223_g53914_i0forward_frame_1 - 0.057 12.8 0.1 0.057 12.8 0.1 1.2 1 1 0 1 1 1 0 DNA polymerase (viral) C-terminal domain Cyclin_N PF00134.23 NODE_61853_length_264_cov_1.681223_g53913_i0reverse_frame_1 - 2.4e-07 30.6 0.1 3.1e-07 30.2 0.1 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 NODE_61853_length_264_cov_1.681223_g53913_i0reverse_frame_1 - 1.9e-05 25.1 0.0 2.2e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Cyclin DUF2529 PF10740.9 NODE_61847_length_264_cov_1.746725_g53907_i0forward_frame_1 - 0.14 11.8 0.1 0.15 11.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) Jagunal PF07086.12 NODE_61846_length_264_cov_1.751092_g53906_i0forward_frame_1 - 0.12 12.4 1.9 0.15 12.1 1.9 1.0 1 0 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis Skp1 PF01466.19 NODE_61834_length_264_cov_1.903930_g53894_i0reverse_frame_1 - 0.025 14.7 0.2 0.052 13.7 0.2 1.7 1 1 0 1 1 1 0 Skp1 family, dimerisation domain Phage_integrase PF00589.22 NODE_61832_length_264_cov_1.965066_g53892_i0reverse_frame_1 - 1.2e-24 87.0 0.4 1.3e-24 86.9 0.4 1.0 1 0 0 1 1 1 1 Phage integrase family ADSL_C PF10397.9 NODE_61832_length_264_cov_1.965066_g53892_i0reverse_frame_1 - 0.13 12.8 0.1 0.15 12.6 0.1 1.3 1 1 0 1 1 1 0 Adenylosuccinate lyase C-terminus Holin_2-3 PF13272.6 NODE_61828_length_264_cov_2.008734_g53888_i0forward_frame_1 - 0.0023 18.2 1.2 0.0029 17.9 1.2 1.2 1 0 0 1 1 1 1 Putative 2/3 transmembrane domain holin LptF_LptG PF03739.14 NODE_61828_length_264_cov_2.008734_g53888_i0forward_frame_1 - 0.2 10.5 5.1 0.23 10.3 5.1 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Macoilin PF09726.9 NODE_61825_length_264_cov_2.052402_g53885_i0forward_frame_1 - 2 6.9 2.8 1.9 6.9 2.8 1.0 1 0 0 1 1 1 0 Macoilin family zf-RING_2 PF13639.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 3.9e-10 39.9 9.4 5.1e-10 39.5 9.4 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 6.3e-08 32.2 9.5 6.3e-08 32.2 9.5 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 1.8e-06 28.1 9.4 4.9e-06 26.7 9.4 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 4.6e-06 26.6 3.9 4.6e-06 26.6 3.9 1.7 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 4.5e-05 23.2 8.3 7.1e-05 22.6 8.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.00013 21.9 7.8 0.00019 21.4 7.8 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.00079 19.0 9.9 0.0021 17.6 9.9 1.8 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.00098 19.1 6.3 0.0022 18.0 6.3 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.0051 17.0 7.8 0.014 15.6 7.8 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.0062 16.4 11.3 0.017 14.9 11.3 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.0073 16.2 13.0 0.0099 15.8 5.4 2.1 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 RINGv PF12906.7 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.0088 16.1 3.7 0.015 15.4 3.7 1.4 1 1 0 1 1 1 1 RING-variant domain zf-HC5HC2H_2 PF13832.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.016 15.4 4.9 0.021 15.0 4.8 1.4 1 1 0 1 1 1 0 PHD-zinc-finger like domain PHD PF00628.29 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.035 14.0 8.0 0.062 13.2 8.0 1.4 1 0 0 1 1 1 0 PHD-finger zf-C3HC4_4 PF15227.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.11 12.7 6.7 0.34 11.1 6.7 1.9 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-HC5HC2H PF13771.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.11 12.8 6.0 0.19 12.0 5.9 1.5 1 1 1 2 2 2 0 PHD-like zinc-binding domain DnaT PF17948.1 NODE_61814_length_264_cov_2.218341_g53874_i0reverse_frame_1 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 DnaT DNA-binding domain DASH_Ask1 PF08655.10 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_1 - 0.062 13.2 0.1 0.089 12.7 0.1 1.3 1 0 0 1 1 1 0 DASH complex subunit Ask1 CAAD PF14159.6 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.0018 18.0 3.2 0.0027 17.5 3.2 1.3 1 0 0 1 1 1 1 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase HemY_N PF07219.13 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.005 17.0 2.5 0.0072 16.5 2.5 1.2 1 0 0 1 1 1 1 HemY protein N-terminus TMEM154 PF15102.6 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.015 15.2 2.2 0.017 15.1 2.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Phlebovirus_G1 PF07243.11 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.04 12.3 2.7 0.038 12.4 2.7 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Protocadherin PF08374.11 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.35 10.8 2.6 0.35 10.8 2.6 1.2 1 0 0 1 1 1 0 Protocadherin Baculo_11_kDa PF06143.11 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 1.8 8.2 10.6 1.3 8.6 8.0 2.0 2 0 0 2 2 2 0 Baculovirus 11 kDa family RIFIN PF02009.16 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 2.8 7.8 4.2 3.4 7.5 4.2 1.2 1 0 0 1 1 1 0 Rifin Renin_r PF07850.14 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 3.6 8.3 7.4 3.2 8.4 6.8 1.3 1 1 0 1 1 1 0 Renin receptor-like protein ECSCR PF15820.5 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 9.1 6.2 10.7 16 5.4 10.7 1.5 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Nucleotid_trans PF03407.16 NODE_61803_length_264_cov_2.475983_g53863_i0forward_frame_1 - 6.1e-07 29.6 0.6 2.8e-05 24.2 0.6 2.0 1 1 0 1 1 1 1 Nucleotide-diphospho-sugar transferase Toxin_8 PF07365.12 NODE_61800_length_264_cov_2.541485_g53860_i0reverse_frame_1 - 0.036 14.3 0.6 0.036 14.3 0.6 2.0 1 1 1 2 2 2 0 Alpha conotoxin precursor Neisseria_TspB PF05616.13 NODE_61797_length_264_cov_2.589520_g53857_i0forward_frame_1 - 4.4 5.7 8.4 4.6 5.6 8.4 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein CRISPR_Cse2 PF09485.10 NODE_61795_length_264_cov_2.637555_g53855_i0reverse_frame_1 - 0.041 14.4 0.1 0.048 14.2 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein Cse2 (CRISPR_cse2) DUF2613 PF11021.8 NODE_61795_length_264_cov_2.637555_g53855_i0reverse_frame_1 - 0.092 12.9 2.3 1.3 9.2 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) DUF3986 PF13143.6 NODE_61794_length_264_cov_2.655022_g53854_i0forward_frame_1 - 0.065 14.2 0.0 0.073 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3986) Peripla_BP_4 PF13407.6 NODE_61788_length_264_cov_3.170306_g53848_i0reverse_frame_1 - 5.9e-21 75.2 2.1 6.3e-21 75.1 2.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_3 PF13377.6 NODE_61788_length_264_cov_3.170306_g53848_i0reverse_frame_1 - 0.00033 21.0 0.1 0.00034 21.0 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 NODE_61788_length_264_cov_3.170306_g53848_i0reverse_frame_1 - 0.0011 18.4 0.1 0.0011 18.4 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family PyrBI_leader PF08052.11 NODE_61787_length_264_cov_3.497817_g53847_i0forward_frame_1 - 0.078 13.0 0.1 0.12 12.3 0.1 1.3 1 0 0 1 1 1 0 PyrBI operon leader peptide DUF4620 PF15399.6 NODE_61782_length_264_cov_5.890830_g53842_i0forward_frame_1 - 0.28 11.5 8.1 0.42 11.0 8.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4620) DUF325 PF03804.13 NODE_61780_length_264_cov_27.179039_g53840_i0forward_frame_1 - 0.032 14.3 0.1 0.042 13.9 0.1 1.4 1 1 0 1 1 1 0 Viral proteins of unknown function Spore-coat_CotD PF11122.8 NODE_61772_length_264_cov_44.755459_g53832_i0reverse_frame_1 - 0.048 14.5 0.5 0.057 14.2 0.5 1.2 1 0 0 1 1 1 0 Inner spore coat protein D Med19 PF10278.9 NODE_61769_length_264_cov_49.886463_g53829_i0reverse_frame_1 - 0.019 14.9 1.9 0.022 14.7 1.9 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF883 PF05957.13 NODE_61769_length_264_cov_49.886463_g53829_i0reverse_frame_1 - 0.094 13.3 4.0 0.12 13.0 4.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) FUSC PF04632.12 NODE_61769_length_264_cov_49.886463_g53829_i0reverse_frame_1 - 0.21 10.1 1.6 0.22 10.0 1.6 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Filo_glycop PF01611.16 NODE_61767_length_264_cov_55.388646_g53827_i0reverse_frame_1 - 0.12 11.3 0.3 0.13 11.2 0.3 1.1 1 0 0 1 1 1 0 Filovirus glycoprotein PDZ_6 PF17820.1 NODE_61764_length_264_cov_56.755459_g53824_i0forward_frame_1 - 0.017 15.0 0.2 0.022 14.6 0.2 1.2 1 0 0 1 1 1 0 PDZ domain Mito_carr PF00153.27 NODE_61745_length_264_cov_117.781659_g53805_i0forward_frame_1 - 6.1e-06 26.1 0.0 8e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein FTZ PF03867.14 NODE_61739_length_264_cov_182.419214_g53799_i0forward_frame_1 - 0.033 13.7 0.0 0.034 13.7 0.0 1.1 1 0 0 1 1 1 0 Fushi tarazu (FTZ), N-terminal region BORCS7 PF16088.5 NODE_61732_length_264_cov_452.467249_g53792_i0forward_frame_1 - 0.15 12.4 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 7 TruD PF01142.18 NODE_61732_length_264_cov_452.467249_g53792_i0forward_frame_1 - 0.17 10.7 0.0 0.19 10.5 0.0 1.0 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) Pox_D3 PF04580.13 NODE_61727_length_264_cov_1546.842795_g53787_i0reverse_frame_1 - 0.0029 17.3 0.2 0.0033 17.1 0.2 1.1 1 0 0 1 1 1 1 Chordopoxvirinae D3 protein GSHPx PF00255.19 NODE_61723_length_265_cov_0.921739_g53783_i0reverse_frame_2 - 0.15 11.6 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Glutathione peroxidase CENP-F_C_Rb_bdg PF10490.9 NODE_61720_length_265_cov_1.013043_g53780_i0reverse_frame_3 - 0.15 11.5 0.0 0.23 10.9 0.0 1.2 1 0 0 1 1 1 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 zf-CHC2 PF01807.20 NODE_61720_length_265_cov_1.013043_g53780_i0forward_frame_2 - 0.088 12.6 0.5 0.12 12.2 0.5 1.2 1 0 0 1 1 1 0 CHC2 zinc finger # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks271.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks271.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks271.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks271.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AAA PF00004.29 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 6.8e-21 75.1 0.0 7.9e-21 74.9 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 5.9e-06 26.1 0.0 7e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0001 21.7 0.0 0.00011 21.5 0.0 1.0 1 0 0 1 1 1 1 TIP49 P-loop domain Parvo_NS1 PF01057.17 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.00015 20.9 0.0 0.00017 20.8 0.0 1.1 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 AAA_22 PF13401.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.00049 20.4 0.0 0.00067 20.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0006 20.2 0.0 0.00061 20.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain RNA_helicase PF00910.22 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.00081 19.8 0.0 0.001 19.4 0.0 1.2 1 0 0 1 1 1 1 RNA helicase Mg_chelatase PF01078.21 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.00094 18.6 0.1 0.0011 18.3 0.1 1.2 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0013 18.5 0.0 0.0016 18.2 0.0 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0019 18.4 0.0 0.0022 18.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0039 17.2 0.0 0.004 17.2 0.0 1.1 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0053 17.3 0.0 0.0062 17.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0055 16.1 0.0 0.0059 16.0 0.0 1.2 1 0 0 1 1 1 1 KaiC AAA_28 PF13521.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0056 16.9 0.0 0.0068 16.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0075 16.3 0.0 0.0098 15.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0078 15.7 0.0 0.0078 15.7 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF2075 PF09848.9 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0085 15.4 0.0 0.0099 15.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_25 PF13481.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.015 14.9 0.0 0.015 14.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.017 14.6 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 PhoH-like protein AAA_3 PF07726.11 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.032 14.1 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.05 13.4 0.0 0.055 13.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.054 12.7 0.0 0.057 12.6 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.056 13.2 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.065 13.7 0.0 0.074 13.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.081 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 NACHT domain Bac_DnaA PF00308.18 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.1 12.4 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein ABC_tran PF00005.27 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.12 12.9 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 ABC transporter Sigma54_activat PF00158.26 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.16 11.7 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_19 PF13245.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.19 12.1 0.0 0.2 12.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.2 10.6 0.0 0.22 10.6 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.24 11.1 0.1 0.3 10.8 0.1 1.2 1 0 0 1 1 1 0 AAA domain Carm_PH PF17888.1 NODE_61717_length_265_cov_1.060870_g53777_i0forward_frame_3 - 0.02 15.3 0.4 0.023 15.0 0.4 1.2 1 0 0 1 1 1 0 Carmil pleckstrin homology domain MBR1 PF17058.5 NODE_61715_length_265_cov_1.069565_g53775_i0reverse_frame_2 - 0.035 14.4 0.6 0.038 14.3 0.6 1.1 1 0 0 1 1 1 0 Mitochondrial biogenesis regulation protein 1 Pro-kuma_activ PF09286.11 NODE_61714_length_265_cov_1.069565_g53774_i0reverse_frame_3 - 0.062 13.6 0.0 0.074 13.3 0.0 1.1 1 0 0 1 1 1 0 Pro-kumamolisin, activation domain GSH_synthase PF03199.15 NODE_61710_length_265_cov_1.152174_g53770_i0reverse_frame_3 - 0.081 13.4 0.1 0.16 12.4 0.1 1.5 1 1 0 1 1 1 0 Eukaryotic glutathione synthase TauE PF01925.19 NODE_61709_length_265_cov_1.173913_g53769_i0forward_frame_3 - 1.4e-05 24.8 3.4 1.5e-05 24.7 3.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE 7TM_GPCR_Sru PF10322.9 NODE_61707_length_265_cov_1.204348_g53767_i0reverse_frame_2 - 0.024 14.0 5.1 0.028 13.8 5.1 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru AFG1_ATPase PF03969.16 NODE_61704_length_265_cov_1.213043_g53764_i0forward_frame_3 - 2e-05 23.7 0.0 2.2e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 AFG1-like ATPase cNMP_binding PF00027.29 NODE_61699_length_265_cov_1.308696_g53759_i0reverse_frame_2 - 7.7e-09 35.5 0.0 9.7e-09 35.2 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF1561 PF07598.11 NODE_61699_length_265_cov_1.308696_g53759_i0reverse_frame_2 - 0.015 13.6 0.0 0.015 13.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1561) TPP_enzyme_N PF02776.18 NODE_61694_length_265_cov_1.373913_g53754_i0forward_frame_2 - 5.8e-12 45.5 0.0 6.7e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SpoIISA_toxin PF14171.6 NODE_61691_length_265_cov_1.382609_g53751_i0forward_frame_3 - 0.047 13.4 1.3 0.053 13.2 1.3 1.0 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system AAL_decarboxy PF03306.13 NODE_61691_length_265_cov_1.382609_g53751_i0forward_frame_3 - 0.073 12.4 0.3 0.085 12.2 0.3 1.1 1 0 0 1 1 1 0 Alpha-acetolactate decarboxylase cNMP_binding PF00027.29 NODE_61686_length_265_cov_1.408696_g53746_i0forward_frame_3 - 1.8e-06 27.9 0.0 2.1e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Smac_DIABLO PF09057.10 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_2 - 0.12 11.7 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 Second Mitochondria-derived Activator of Caspases ABC_tran_Xtn PF12848.7 NODE_61681_length_265_cov_1.517391_g53741_i0reverse_frame_3 - 0.015 15.3 4.4 0.023 14.7 4.4 1.3 1 1 0 1 1 1 0 ABC transporter POTRA_TamA_1 PF17243.2 NODE_61681_length_265_cov_1.517391_g53741_i0reverse_frame_3 - 0.037 14.1 0.3 0.054 13.6 0.3 1.3 1 0 0 1 1 1 0 POTRA domain TamA domain 1 Pox_A_type_inc PF04508.12 NODE_61681_length_265_cov_1.517391_g53741_i0reverse_frame_3 - 0.063 13.1 1.1 0.18 11.7 0.1 2.4 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat MDM10 PF12519.8 NODE_61681_length_265_cov_1.517391_g53741_i0reverse_frame_3 - 1.1 8.1 4.8 1.2 8.0 4.8 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 Dscam_C PF12355.8 NODE_61678_length_265_cov_1.608696_g53738_i0reverse_frame_3 - 0.12 13.3 2.0 0.14 13.1 2.0 1.1 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal Defensin_beta PF00711.19 NODE_61675_length_265_cov_1.713043_g53735_i0reverse_frame_3 - 0.29 11.2 8.7 3.4 7.7 0.2 2.6 2 1 1 3 3 3 0 Beta defensin Mito_fiss_reg PF05308.11 NODE_61672_length_265_cov_1.734783_g53732_i0reverse_frame_3 - 0.67 10.0 6.2 0.71 9.9 6.2 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator Neur_chan_LBD PF02931.23 NODE_61668_length_265_cov_1.795652_g53728_i0reverse_frame_3 - 6.9e-07 28.9 1.9 8.1e-07 28.7 1.9 1.0 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel ligand binding domain MM_CoA_mutase PF01642.22 NODE_61665_length_265_cov_1.834783_g53725_i0reverse_frame_3 - 1.2e-39 136.2 0.2 1.3e-39 136.2 0.2 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase fragilysinNterm PF16376.5 NODE_61664_length_265_cov_1.839130_g53724_i0reverse_frame_3 - 0.22 11.2 0.0 0.33 10.7 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of fragilysin Ploopntkinase2 PF18747.1 NODE_61660_length_265_cov_1.878261_g53720_i0forward_frame_2 - 0.067 12.4 0.0 0.073 12.3 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase2 Remorin_C PF03763.13 NODE_61659_length_265_cov_1.908696_g53719_i0forward_frame_3 - 0.19 11.6 6.4 0.52 10.2 6.6 1.8 1 1 0 1 1 1 0 Remorin, C-terminal region RIG-I_C PF18119.1 NODE_61656_length_265_cov_1.982609_g53716_i0forward_frame_3 - 0.064 13.3 0.2 0.08 13.0 0.2 1.1 1 0 0 1 1 1 0 RIG-I receptor C-terminal domain Tombus_P19 PF03220.13 NODE_61655_length_265_cov_1.986957_g53715_i0reverse_frame_2 - 0.12 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Tombusvirus P19 core protein DUF2490 PF10677.9 NODE_61651_length_265_cov_2.086957_g53711_i0reverse_frame_2 - 0.13 12.2 0.2 0.16 11.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2490) SpmSyn_N PF17950.1 NODE_61651_length_265_cov_2.086957_g53711_i0forward_frame_3 - 0.14 12.4 0.7 0.59 10.4 0.1 1.9 1 1 1 2 2 2 0 S-adenosylmethionine decarboxylase N -terminal zf-FPG_IleRS PF06827.14 NODE_61650_length_265_cov_2.113043_g53710_i0reverse_frame_3 - 0.034 14.0 0.1 0.061 13.2 0.1 1.4 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS DNA_pol_B_exo1 PF03104.19 NODE_61648_length_265_cov_2.204348_g53708_i0reverse_frame_3 - 0.0048 16.1 0.0 0.0055 15.9 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DUF2268 PF10026.9 NODE_61644_length_265_cov_2.378261_g53704_i0forward_frame_2 - 0.21 11.2 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Predicted Zn-dependent protease (DUF2268) DUF386 PF04074.12 NODE_61640_length_265_cov_2.500000_g53700_i0reverse_frame_3 - 0.035 14.0 0.0 0.041 13.8 0.0 1.1 1 0 0 1 1 1 0 YhcH/YjgK/YiaL Ig_C17orf99 PF17736.1 NODE_61640_length_265_cov_2.500000_g53700_i0reverse_frame_3 - 0.075 13.1 0.0 0.098 12.7 0.0 1.3 1 0 0 1 1 1 0 C17orf99 Ig domain Aminotran_5 PF00266.19 NODE_61639_length_265_cov_2.504348_g53699_i0forward_frame_2 - 1.6e-28 99.7 0.0 1.7e-28 99.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 NODE_61639_length_265_cov_2.504348_g53699_i0forward_frame_2 - 0.065 12.4 0.0 0.081 12.1 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II TDP43_N PF18694.1 NODE_61639_length_265_cov_2.504348_g53699_i0forward_frame_2 - 0.15 11.9 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Transactive response DNA-binding protein N-terminal domain Npa1 PF11707.8 NODE_61638_length_265_cov_2.547826_g53698_i0reverse_frame_2 - 0.021 14.2 2.7 0.023 14.1 2.7 1.0 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal Flexi_CP_N PF08358.10 NODE_61635_length_265_cov_2.600000_g53695_i0forward_frame_2 - 0.029 14.4 0.6 1.8 8.6 0.2 2.1 2 0 0 2 2 2 0 Carlavirus coat DUF3678 PF12435.8 NODE_61634_length_265_cov_2.604348_g53694_i0reverse_frame_2 - 0.036 13.5 0.3 0.071 12.5 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) MatE PF01554.18 NODE_61631_length_265_cov_2.621739_g53691_i0reverse_frame_3 - 6.4e-07 29.2 3.7 6.8e-07 29.1 3.7 1.0 1 0 0 1 1 1 1 MatE BRCC36_C PF18110.1 NODE_61631_length_265_cov_2.621739_g53691_i0reverse_frame_2 - 0.12 12.6 0.1 0.17 12.1 0.1 1.2 1 0 0 1 1 1 0 BRCC36 C-terminal helical domain PGDH_C PF16896.5 NODE_61630_length_265_cov_2.673913_g53690_i0forward_frame_3 - 0.014 15.4 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 Phosphogluconate dehydrogenase (decarboxylating) C-term DUF3847 PF12958.7 NODE_61630_length_265_cov_2.673913_g53690_i0forward_frame_3 - 0.024 14.8 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3847) FlgM PF04316.13 NODE_61629_length_265_cov_2.691304_g53689_i0reverse_frame_2 - 0.0056 17.0 0.5 0.0098 16.2 0.3 1.5 1 1 0 1 1 1 1 Anti-sigma-28 factor, FlgM HEAT_2 PF13646.6 NODE_61629_length_265_cov_2.691304_g53689_i0reverse_frame_2 - 0.014 15.8 0.9 0.02 15.3 0.9 1.2 1 0 0 1 1 1 0 HEAT repeats SpvB PF03534.13 NODE_61629_length_265_cov_2.691304_g53689_i0reverse_frame_2 - 0.22 10.7 0.0 0.25 10.5 0.0 1.0 1 0 0 1 1 1 0 Salmonella virulence plasmid 65kDa B protein FLYWCH_u PF16662.5 NODE_61627_length_265_cov_2.717391_g53687_i0forward_frame_3 - 0.019 15.0 0.2 4.7 7.3 0.0 2.4 2 0 0 2 2 2 0 FLYWCH-type zinc finger-containing protein 1 TCR PF03638.15 NODE_61624_length_265_cov_2.908696_g53684_i0forward_frame_3 - 2e-07 31.2 19.2 2.7e-07 30.8 19.2 1.2 1 0 0 1 1 1 1 Tesmin/TSO1-like CXC domain, cysteine-rich domain MSL2-CXC PF16682.5 NODE_61624_length_265_cov_2.908696_g53684_i0forward_frame_3 - 0.0073 16.4 14.9 0.01 15.9 14.9 1.2 1 0 0 1 1 1 1 CXC domain of E3 ubiquitin-protein ligase MSL2 MRP-L47 PF06984.13 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_3 - 0.031 14.4 1.1 0.045 13.9 1.1 1.4 1 1 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) NAD_binding_10 PF13460.6 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_2 - 1.2e-05 25.3 0.0 1.4e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_2 - 0.003 16.6 0.0 0.003 16.6 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_2 - 0.0093 15.5 0.0 0.0093 15.5 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_2 - 0.011 15.3 0.0 0.012 15.2 0.0 1.1 1 0 0 1 1 1 0 NmrA-like family Rubi_NSP_C PF12601.8 NODE_61622_length_265_cov_3.291304_g53682_i0forward_frame_3 - 0.18 11.9 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 Rubivirus non-structural protein Sterol_MT_C PF08498.10 NODE_61621_length_265_cov_3.421739_g53681_i0reverse_frame_3 - 0.036 14.4 0.1 0.047 14.0 0.1 1.2 1 0 0 1 1 1 0 Sterol methyltransferase C-terminal RNA_pol_L_2 PF13656.6 NODE_61619_length_265_cov_3.991304_g53679_i0reverse_frame_3 - 1e-17 63.6 0.0 1.5e-17 63.1 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 NODE_61619_length_265_cov_3.991304_g53679_i0reverse_frame_3 - 0.00054 19.3 0.0 0.00065 19.1 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Nuc_recep-AF1 PF11825.8 NODE_61616_length_265_cov_4.513043_g53676_i0reverse_frame_3 - 0.062 13.3 0.0 0.074 13.1 0.0 1.2 1 0 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 DOPA_dioxygen PF08883.11 NODE_61616_length_265_cov_4.513043_g53676_i0reverse_frame_2 - 0.033 14.4 0.1 0.043 14.0 0.1 1.2 1 0 0 1 1 1 0 Dopa 4,5-dioxygenase family PetL PF05115.14 NODE_61616_length_265_cov_4.513043_g53676_i0forward_frame_2 - 0.17 11.8 0.6 0.27 11.3 0.6 1.2 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) AAA_lid_4 PF17864.1 NODE_61614_length_265_cov_5.526087_g53674_i0reverse_frame_2 - 0.029 14.1 0.1 0.041 13.6 0.1 1.3 1 0 0 1 1 1 0 RuvB AAA lid domain DUF809 PF05663.11 NODE_61614_length_265_cov_5.526087_g53674_i0forward_frame_3 - 0.49 10.5 1.9 0.64 10.2 1.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF809) zf-TRM13_CCCH PF11722.8 NODE_61608_length_265_cov_37.291304_g53668_i0reverse_frame_3 - 0.0085 15.8 0.3 0.013 15.3 0.3 1.3 1 0 0 1 1 1 1 CCCH zinc finger in TRM13 protein Fungus-induced PF10917.8 NODE_61606_length_265_cov_38.752174_g53666_i0forward_frame_2 - 1.8 8.9 3.9 0.4 11.0 0.6 1.6 2 0 0 2 2 2 0 Fungus-induced protein Metallophos PF00149.28 NODE_61600_length_265_cov_50.034783_g53660_i0reverse_frame_2 - 0.003 18.1 0.1 0.0031 18.0 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase SR-25 PF10500.9 NODE_61598_length_265_cov_52.973913_g53658_i0forward_frame_2 - 0.045 13.4 8.2 0.05 13.2 8.2 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein FANCI_S3 PF14677.6 NODE_61593_length_265_cov_68.782609_g53653_i0reverse_frame_2 - 0.07 12.8 0.0 0.091 12.5 0.0 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 Ribosomal_L7Ae PF01248.26 NODE_61585_length_265_cov_86.700000_g53645_i0reverse_frame_3 - 3.2e-08 33.2 0.0 3.8e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Thx PF17070.5 NODE_61585_length_265_cov_86.700000_g53645_i0forward_frame_2 - 6.8 7.0 9.2 2.3 8.5 5.8 1.9 1 1 1 2 2 2 0 30S ribosomal protein Thx Arm_3 PF16186.5 NODE_61584_length_265_cov_87.282609_g53644_i0forward_frame_2 - 3.8e-06 26.3 0.0 5.4e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Atypical Arm repeat RE_Bpu10I PF09549.10 NODE_61582_length_265_cov_91.065217_g53642_i0forward_frame_3 - 0.02 14.5 0.0 0.02 14.5 0.0 1.1 1 0 0 1 1 1 0 Bpu10I restriction endonuclease MbtH PF03621.13 NODE_61579_length_265_cov_98.365217_g53639_i0forward_frame_3 - 0.0043 16.5 0.1 0.0079 15.6 0.1 1.4 1 1 0 1 1 1 1 MbtH-like protein Pecanex_C PF05041.15 NODE_61575_length_265_cov_157.221739_g53635_i0forward_frame_3 - 0.12 11.9 0.2 0.16 11.5 0.2 1.1 1 0 0 1 1 1 0 Pecanex protein (C-terminus) zf-NF-X1 PF01422.17 NODE_61567_length_265_cov_396.926087_g53627_i0forward_frame_3 - 5.1 7.2 8.2 1.2 9.2 3.6 1.9 2 0 0 2 2 2 0 NF-X1 type zinc finger DUF5454 PF17535.2 NODE_61567_length_265_cov_396.926087_g53627_i0forward_frame_2 - 0.058 12.8 0.1 0.06 12.7 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5454) DUF2198 PF09964.9 NODE_61565_length_265_cov_532.282609_g53625_i0reverse_frame_2 - 0.032 14.3 0.0 0.047 13.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2198) Prefoldin PF02996.17 NODE_61564_length_265_cov_537.695652_g53624_i0reverse_frame_2 - 8.9e-12 45.0 0.0 9.9e-12 44.8 0.0 1.1 1 0 0 1 1 1 1 Prefoldin subunit STN1_2 PF09170.10 NODE_61564_length_265_cov_537.695652_g53624_i0reverse_frame_2 - 0.056 13.7 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 DUF3482 PF11981.8 NODE_61562_length_265_cov_24099.817391_g53622_i0forward_frame_2 - 0.32 10.4 11.5 0.24 10.8 10.4 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3482) Lar_restr_allev PF14354.6 NODE_61545_length_266_cov_1.333333_g53605_i0forward_frame_2 - 0.92 9.9 5.9 3.7 8.0 0.4 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar Perm-CXXC PF15629.6 NODE_61544_length_266_cov_1.380952_g53604_i0forward_frame_3 - 2 8.7 12.0 2.3 8.6 4.3 2.4 1 1 1 2 2 2 0 Permuted single zf-CXXC unit RAG2_PHD PF13341.6 NODE_61542_length_266_cov_1.385281_g53602_i0reverse_frame_3 - 0.12 12.5 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 RAG2 PHD domain Lamprin PF06403.11 NODE_61542_length_266_cov_1.385281_g53602_i0forward_frame_3 - 2.9 7.8 6.4 11 6.0 0.6 2.0 1 1 1 2 2 2 0 Lamprin DUF285 PF03382.14 NODE_61539_length_266_cov_1.393939_g53599_i0forward_frame_3 - 0.086 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Mycoplasma protein of unknown function, DUF285 C5-epim_C PF06662.13 NODE_61537_length_266_cov_1.428571_g53597_i0reverse_frame_2 - 0.014 14.9 0.5 0.014 14.9 0.5 1.1 1 0 0 1 1 1 0 D-glucuronyl C5-epimerase C-terminus Methyltransf_19 PF04672.12 NODE_61532_length_266_cov_1.515152_g53592_i0reverse_frame_2 - 0.092 12.2 0.0 0.094 12.2 0.0 1.2 1 0 0 1 1 1 0 S-adenosyl methyltransferase DAO PF01266.24 NODE_61529_length_266_cov_1.558442_g53589_i0reverse_frame_2 - 0.00065 19.4 0.5 0.00094 18.9 0.5 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 NODE_61529_length_266_cov_1.558442_g53589_i0reverse_frame_2 - 0.0084 15.4 0.0 0.0085 15.4 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_61529_length_266_cov_1.558442_g53589_i0reverse_frame_2 - 0.046 14.3 0.4 0.077 13.6 0.4 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Ocnus PF05005.15 NODE_61529_length_266_cov_1.558442_g53589_i0reverse_frame_2 - 0.086 13.0 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Janus/Ocnus family (Ocnus) FAD_binding_3 PF01494.19 NODE_61529_length_266_cov_1.558442_g53589_i0reverse_frame_2 - 0.13 11.5 0.1 0.16 11.2 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain Luciferase_3H PF10284.9 NODE_61527_length_266_cov_1.610390_g53587_i0forward_frame_2 - 0.029 14.5 0.1 0.041 14.0 0.1 1.3 1 0 0 1 1 1 0 Luciferase helical bundle domain Toxin_28 PF08115.11 NODE_61526_length_266_cov_1.619048_g53586_i0reverse_frame_2 - 0.045 13.6 5.1 0.047 13.5 2.7 1.9 2 0 0 2 2 2 0 SFI toxin family PTPlike_phytase PF14566.6 NODE_61521_length_266_cov_1.727273_g53581_i0reverse_frame_2 - 0.74 9.9 4.6 0.89 9.7 4.4 1.3 1 1 0 1 1 1 0 Inositol hexakisphosphate Exo_endo_phos_2 PF14529.6 NODE_61519_length_266_cov_1.731602_g53579_i0reverse_frame_2 - 0.014 15.2 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Exo_endo_phos PF03372.23 NODE_61519_length_266_cov_1.731602_g53579_i0reverse_frame_2 - 0.051 13.1 0.0 0.051 13.1 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Pannexin_like PF12534.8 NODE_61518_length_266_cov_1.731602_g53578_i0reverse_frame_3 - 0.0036 16.5 1.9 0.004 16.3 1.9 1.1 1 0 0 1 1 1 1 Pannexin-like TM region of LRRC8 DpnI_C PF17726.1 NODE_61515_length_266_cov_1.774892_g53575_i0reverse_frame_2 - 0.063 13.4 0.1 0.1 12.7 0.1 1.4 1 0 0 1 1 1 0 Dam-replacing HTH domain TMPIT PF07851.13 NODE_61515_length_266_cov_1.774892_g53575_i0reverse_frame_2 - 0.1 11.8 0.7 0.11 11.7 0.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein RNase_H PF00075.24 NODE_61512_length_266_cov_1.848485_g53572_i0reverse_frame_2 - 0.25 11.5 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 RNase H Haemocyan_bet_s PF14830.6 NODE_61512_length_266_cov_1.848485_g53572_i0forward_frame_2 - 0.084 12.9 0.0 0.084 12.9 0.0 1.2 1 0 0 1 1 1 0 Haemocyanin beta-sandwich SHQ1 PF04925.15 NODE_61510_length_266_cov_1.904762_g53570_i0reverse_frame_2 - 0.038 13.6 3.4 0.043 13.4 3.4 1.1 1 0 0 1 1 1 0 SHQ1 protein zf-C3HC4_4 PF15227.6 NODE_61509_length_266_cov_1.913420_g53569_i0forward_frame_2 - 0.0046 17.1 2.7 0.008 16.3 2.7 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING XPA_C PF05181.12 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_2 - 0.0099 15.8 1.4 0.012 15.6 0.7 1.6 1 1 0 1 1 1 1 XPA protein C-terminus DHO_dh PF01180.21 NODE_61505_length_266_cov_2.012987_g53565_i0reverse_frame_3 - 1.5e-14 53.9 0.0 1.6e-14 53.9 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase DAHP_synth_2 PF01474.16 NODE_61505_length_266_cov_2.012987_g53565_i0reverse_frame_3 - 0.072 11.6 0.0 0.078 11.5 0.0 1.1 1 0 0 1 1 1 0 Class-II DAHP synthetase family COOH-NH2_lig PF14395.6 NODE_61505_length_266_cov_2.012987_g53565_i0forward_frame_3 - 0.076 12.2 0.0 0.088 12.0 0.0 1.1 1 0 0 1 1 1 0 Phage phiEco32-like COOH.NH2 ligase-type 2 HERV-K_REC PF15695.5 NODE_61499_length_266_cov_2.199134_g53559_i0forward_frame_3 - 0.99 9.5 3.9 0.4 10.8 0.7 1.9 2 1 0 2 2 2 0 Rec (regulator of expression encoded by corf) of HERV-K-113 Response_reg PF00072.24 NODE_61496_length_266_cov_2.220779_g53556_i0reverse_frame_2 - 3.2e-18 65.9 0.0 3.5e-18 65.8 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Abhydrolase_1 PF00561.20 NODE_61495_length_266_cov_2.242424_g53555_i0reverse_frame_2 - 9.4e-05 22.2 0.0 0.00011 21.9 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold RRN9 PF10680.9 NODE_61490_length_266_cov_2.290043_g53550_i0reverse_frame_3 - 0.1 12.9 3.1 0.091 13.1 2.3 1.5 1 1 0 1 1 1 0 RNA polymerase I specific transcription initiation factor Med3 PF11593.8 NODE_61490_length_266_cov_2.290043_g53550_i0reverse_frame_3 - 1 8.4 4.4 0.94 8.6 4.4 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal TetR_C_20 PF17925.1 NODE_61490_length_266_cov_2.290043_g53550_i0reverse_frame_2 - 0.13 12.6 0.2 0.17 12.2 0.2 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CEND1 PF15677.5 NODE_61489_length_266_cov_2.294372_g53549_i0forward_frame_2 - 0.02 15.5 0.2 0.023 15.2 0.2 1.1 1 0 0 1 1 1 0 Cell cycle exit and neuronal differentiation protein 1 LpoB PF13036.6 NODE_61482_length_266_cov_2.428571_g53542_i0reverse_frame_3 - 0.00021 21.3 0.0 0.00024 21.1 0.0 1.1 1 0 0 1 1 1 1 Peptidoglycan-synthase activator LpoB RRN9 PF10680.9 NODE_61481_length_266_cov_2.445887_g53541_i0reverse_frame_2 - 0.15 12.3 0.3 0.24 11.7 0.3 1.3 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor DUF1293 PF06950.11 NODE_61480_length_266_cov_2.480519_g53540_i0reverse_frame_2 - 0.2 11.8 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1293) BpuSI_N PF15516.6 NODE_61478_length_266_cov_2.567100_g53538_i0reverse_frame_3 - 0.081 12.8 0.0 0.085 12.8 0.0 1.1 1 0 0 1 1 1 0 BpuSI N-terminal domain NICE-3 PF07406.11 NODE_61478_length_266_cov_2.567100_g53538_i0forward_frame_3 - 0.1 12.6 0.3 6.5 6.7 0.0 2.2 2 0 0 2 2 2 0 NICE-3 protein zf-rbx1 PF12678.7 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 0.009 16.3 0.4 0.014 15.7 0.4 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain GP67 PF17634.2 NODE_61476_length_266_cov_2.640693_g53536_i0forward_frame_3 - 0.005 17.2 7.9 0.005 17.2 7.9 1.4 1 1 0 1 1 1 1 Gene product 67 Flag1_repress PF03614.13 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_2 - 0.0017 18.2 0.5 0.002 18.0 0.5 1.0 1 0 0 1 1 1 1 Repressor of phase-1 flagellin Herpes_U34 PF04541.13 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_2 - 0.027 13.8 0.3 0.029 13.6 0.3 1.1 1 0 0 1 1 1 0 Herpesvirus virion protein U34 Zf_RING PF16744.5 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_2 - 0.031 14.4 1.2 0.047 13.8 1.2 1.3 1 0 0 1 1 1 0 KIAA1045 RING finger VP9 PF09625.10 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_2 - 0.036 14.2 0.2 0.054 13.7 0.2 1.5 1 1 0 1 1 1 0 VP9 protein Glyco_hydro_7 PF00840.20 NODE_61471_length_266_cov_2.857143_g53531_i0reverse_frame_3 - 0.024 13.4 1.1 0.023 13.4 1.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 7 Glyco_H_20C_C PF18088.1 NODE_61471_length_266_cov_2.857143_g53531_i0reverse_frame_2 - 0.089 12.6 1.0 0.083 12.7 1.0 1.3 1 1 0 1 1 1 0 Glycoside Hydrolase 20C C-terminal domain MR_MLE_C PF13378.6 NODE_61470_length_266_cov_2.891775_g53530_i0forward_frame_3 - 3.6e-10 39.8 0.0 3.8e-10 39.7 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 NODE_61470_length_266_cov_2.891775_g53530_i0forward_frame_3 - 0.0083 15.3 0.0 0.0083 15.3 0.0 1.0 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus zf-C2H2_7 PF15269.6 NODE_61469_length_266_cov_2.904762_g53529_i0reverse_frame_2 - 0.033 14.3 0.0 0.069 13.2 0.0 1.6 1 0 0 1 1 1 0 Zinc-finger YajC PF02699.15 NODE_61469_length_266_cov_2.904762_g53529_i0forward_frame_3 - 3.4e-09 36.5 0.6 3.4e-09 36.5 0.6 1.6 2 0 0 2 2 2 1 Preprotein translocase subunit SecD-TM1 PF13721.6 NODE_61469_length_266_cov_2.904762_g53529_i0forward_frame_3 - 3.8e-06 27.3 3.0 3.4e-05 24.3 2.4 2.0 2 0 0 2 2 2 1 SecD export protein N-terminal TM region MreC PF04085.14 NODE_61469_length_266_cov_2.904762_g53529_i0forward_frame_3 - 0.012 15.5 0.2 0.015 15.2 0.2 1.3 1 1 0 1 1 1 0 rod shape-determining protein MreC DUF2688 PF10892.8 NODE_61467_length_266_cov_3.155844_g53527_i0forward_frame_3 - 0.045 13.2 0.4 0.085 12.3 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) AsnC_trans_reg2 PF17805.1 NODE_61462_length_266_cov_3.939394_g53522_i0forward_frame_2 - 0.078 13.1 0.5 0.1 12.8 0.5 1.4 1 1 0 1 1 1 0 AsnC-like ligand binding domain KASH PF10541.9 NODE_61461_length_266_cov_4.203463_g53521_i0reverse_frame_3 - 0.054 13.8 1.1 0.054 13.8 1.1 1.7 2 0 0 2 2 2 0 Nuclear envelope localisation domain DUF948 PF06103.11 NODE_61461_length_266_cov_4.203463_g53521_i0reverse_frame_3 - 5.4 7.3 5.2 2.9 8.2 0.2 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) GerA PF03323.13 NODE_61461_length_266_cov_4.203463_g53521_i0reverse_frame_2 - 2.4 6.5 5.3 2.6 6.4 5.3 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein DUF365 PF04033.12 NODE_61461_length_266_cov_4.203463_g53521_i0forward_frame_2 - 0.029 14.6 1.4 0.033 14.4 1.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF365) DUF1797 PF08796.10 NODE_61460_length_266_cov_4.580087_g53520_i0reverse_frame_2 - 1.7 8.8 6.4 3.3 7.9 0.5 3.0 2 1 2 4 4 4 0 Protein of unknown function (DUF1797) Serpentine_r_xa PF03383.15 NODE_61459_length_266_cov_7.623377_g53519_i0forward_frame_3 - 0.022 14.7 0.2 0.026 14.5 0.2 1.2 1 0 0 1 1 1 0 Caenorhabditis serpentine receptor-like protein, class xa TRAM_LAG1_CLN8 PF03798.16 NODE_61458_length_266_cov_11.744589_g53518_i0reverse_frame_3 - 0.011 15.5 0.6 0.011 15.5 0.6 1.1 1 0 0 1 1 1 0 TLC domain Chitin_synth_2 PF03142.15 NODE_61456_length_266_cov_18.995671_g53516_i0forward_frame_3 - 4.7e-05 22.2 0.0 4.8e-05 22.2 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 NODE_61456_length_266_cov_18.995671_g53516_i0forward_frame_3 - 0.00049 20.1 0.0 0.0005 20.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 NODE_61456_length_266_cov_18.995671_g53516_i0forward_frame_3 - 0.0011 19.0 0.0 0.0013 18.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Antimicrobial_5 PF08026.11 NODE_61453_length_266_cov_34.995671_g53513_i0forward_frame_2 - 0.028 14.5 0.9 0.051 13.7 0.9 1.4 1 0 0 1 1 1 0 Bee antimicrobial peptide DUF5400 PF17379.2 NODE_61452_length_266_cov_37.393939_g53512_i0forward_frame_2 - 0.0047 17.4 1.0 0.0057 17.1 0.5 1.4 1 1 0 1 1 1 1 Family of unknown function (DUF5400) Hanta_nucleocap PF00846.18 NODE_61451_length_266_cov_37.658009_g53511_i0reverse_frame_3 - 0.023 13.2 0.4 0.026 13.0 0.4 1.1 1 0 0 1 1 1 0 Hantavirus nucleocapsid protein Adeno_52K PF03052.15 NODE_61445_length_266_cov_48.779221_g53505_i0reverse_frame_2 - 0.045 13.2 0.1 0.046 13.2 0.1 1.1 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa Popeye PF04831.13 NODE_61445_length_266_cov_48.779221_g53505_i0forward_frame_2 - 4.7 7.4 8.0 5.7 7.1 8.0 1.1 1 0 0 1 1 1 0 Popeye protein conserved region RepB-RCR_reg PF10723.9 NODE_61442_length_266_cov_56.636364_g53502_i0reverse_frame_2 - 1.4 8.9 7.0 0.067 13.1 1.7 1.5 2 0 0 2 2 2 0 Replication regulatory protein RepB Sulfate_transp PF00916.20 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 1.9e-23 82.9 4.7 2.1e-23 82.7 4.7 1.0 1 0 0 1 1 1 1 Sulfate permease family Xan_ur_permease PF00860.20 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 4.7e-05 22.3 7.0 5.3e-05 22.1 7.0 1.0 1 0 0 1 1 1 1 Permease family DUF4010 PF13194.6 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 0.0054 16.4 5.0 0.0064 16.2 5.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4010) MFS_MOT1 PF16983.5 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 0.031 14.7 3.9 0.035 14.5 3.9 1.1 1 0 0 1 1 1 0 Molybdate transporter of MFS superfamily Adeno_GP19K PF04881.13 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 0.074 13.0 0.1 0.078 13.0 0.1 1.2 1 0 0 1 1 1 0 Adenovirus GP19K CCDC106 PF15794.5 NODE_61426_length_266_cov_73.640693_g53486_i0reverse_frame_2 - 0.28 10.9 3.5 0.29 10.8 3.5 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Atrophin-1 PF03154.15 NODE_61426_length_266_cov_73.640693_g53486_i0reverse_frame_2 - 1.2 7.3 4.3 1.5 7.0 4.3 1.0 1 0 0 1 1 1 0 Atrophin-1 family ATXN-1_C PF12547.8 NODE_61424_length_266_cov_76.818182_g53484_i0forward_frame_3 - 0.037 14.4 0.2 0.23 11.8 0.0 2.0 2 1 0 2 2 2 0 Capicua transcriptional repressor modulator Herpes_LAMP2 PF06126.11 NODE_61416_length_266_cov_91.982684_g53476_i0reverse_frame_2 - 0.031 12.9 0.2 0.032 12.9 0.2 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 UPF0524 PF15823.5 NODE_61413_length_266_cov_100.601732_g53473_i0forward_frame_3 - 0.14 11.5 1.5 0.15 11.5 1.5 1.1 1 0 0 1 1 1 0 UPF0524 of C3orf70 DUF4717 PF15838.5 NODE_61413_length_266_cov_100.601732_g53473_i0forward_frame_2 - 0.23 11.5 1.4 0.32 11.0 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4717) EAGR_box PF16713.5 NODE_61412_length_266_cov_102.064935_g53472_i0reverse_frame_3 - 0.16 11.7 0.9 13 5.5 0.0 2.2 2 0 0 2 2 2 0 Enriched in aromatic and glycine Residues box ALS2CR11 PF15729.5 NODE_61411_length_266_cov_102.359307_g53471_i0forward_frame_2 - 0.22 10.6 0.0 0.24 10.5 0.0 1.0 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 candidate 11 Tmem26 PF09772.9 NODE_61409_length_266_cov_106.086580_g53469_i0reverse_frame_2 - 0.22 10.9 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 26 VBS PF08913.10 NODE_61408_length_266_cov_120.316017_g53468_i0reverse_frame_3 - 0.035 14.6 0.1 0.039 14.4 0.1 1.0 1 0 0 1 1 1 0 Vinculin Binding Site Syntaxin-6_N PF09177.11 NODE_61408_length_266_cov_120.316017_g53468_i0reverse_frame_3 - 0.036 14.6 0.2 0.041 14.4 0.2 1.2 1 0 0 1 1 1 0 Syntaxin 6, N-terminal Rad60-SLD PF11976.8 NODE_61405_length_266_cov_147.008658_g53465_i0forward_frame_3 - 0.024 14.5 0.1 0.03 14.1 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ion_trans_N PF08412.10 NODE_61405_length_266_cov_147.008658_g53465_i0forward_frame_3 - 0.14 11.8 0.0 0.29 10.8 0.0 1.5 1 0 0 1 1 1 0 Ion transport protein N-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks272.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks272.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks272.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks272.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:09:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PAP1 PF08601.10 NODE_61394_length_266_cov_267.077922_g53454_i0reverse_frame_2 - 0.13 12.0 1.6 0.12 12.0 1.6 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 Ribosomal_S3Ae PF01015.18 NODE_61384_length_266_cov_832.562771_g53444_i0reverse_frame_2 - 5.5e-05 22.8 0.0 8.2e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal S3Ae family Chloroa_b-bind PF00504.21 NODE_61380_length_266_cov_2298.476190_g53440_i0reverse_frame_3 - 1.9e-08 35.0 0.0 1.9e-08 35.0 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein AXE1 PF05448.12 NODE_61380_length_266_cov_2298.476190_g53440_i0forward_frame_2 - 0.11 11.2 0.1 0.13 10.9 0.1 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) PPP1R35_C PF15503.6 NODE_61379_length_266_cov_5026.445887_g53439_i0forward_frame_2 - 0.081 12.7 0.0 0.097 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 35 C-terminus HA PF03457.14 NODE_61378_length_266_cov_7097.112554_g53438_i0reverse_frame_2 - 0.14 12.6 0.4 0.17 12.2 0.4 1.2 1 0 0 1 1 1 0 Helicase associated domain NAD-GH PF10712.9 NODE_61378_length_266_cov_7097.112554_g53438_i0forward_frame_3 - 2.6e-12 46.0 8.9 3e-12 45.8 8.9 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase NAD-GH PF10712.9 NODE_61377_length_266_cov_10132.147186_g53437_i0forward_frame_3 - 8.6e-13 47.6 9.1 9.7e-13 47.4 9.1 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase TPR_12 PF13424.6 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 3e-07 30.6 0.3 4.1e-07 30.2 0.3 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.00012 21.8 0.4 0.52 10.3 0.4 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.0008 19.6 0.1 0.00088 19.4 0.1 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 UPF0254 PF06787.11 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.0024 17.7 0.1 0.0032 17.2 0.1 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0254) DUF1666 PF07891.12 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.014 15.1 0.3 0.014 15.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1666) TPR_19 PF14559.6 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.049 14.1 0.1 0.067 13.7 0.1 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.11 13.2 1.6 0.52 11.1 0.7 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.11 12.3 2.4 0.6 10.0 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Y_phosphatase PF00102.27 NODE_61371_length_267_cov_0.956897_g53431_i0reverse_frame_3 - 0.00057 19.5 0.0 0.00078 19.1 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DUF3409 PF11889.8 NODE_61370_length_267_cov_0.956897_g53430_i0reverse_frame_3 - 0.12 12.4 0.5 0.12 12.4 0.5 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3409) BatA PF07584.11 NODE_61369_length_267_cov_0.974138_g53429_i0forward_frame_2 - 0.035 14.5 1.7 0.043 14.2 1.7 1.2 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal STIMATE PF12400.8 NODE_61368_length_267_cov_1.034483_g53428_i0forward_frame_3 - 0.06 13.9 0.8 0.079 13.5 0.8 1.0 1 0 0 1 1 1 0 STIMATE family WD40 PF00400.32 NODE_61366_length_267_cov_1.077586_g53426_i0reverse_frame_3 - 0.054 14.4 0.0 0.76 10.7 0.0 2.0 2 0 0 2 2 2 0 WD domain, G-beta repeat DUF3641 PF12345.8 NODE_61365_length_267_cov_1.150862_g53425_i0reverse_frame_3 - 0.016 15.2 0.3 0.023 14.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3641) DUF599 PF04654.12 NODE_61365_length_267_cov_1.150862_g53425_i0forward_frame_2 - 0.086 12.3 0.4 0.11 12.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF599 Cadherin_C_2 PF16492.5 NODE_61361_length_267_cov_1.293103_g53421_i0forward_frame_2 - 0.079 13.7 4.5 0.1 13.3 4.5 1.2 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal zf-TRM13_CCCH PF11722.8 NODE_61354_length_267_cov_1.452586_g53414_i0reverse_frame_2 - 0.16 11.7 6.3 0.59 9.9 0.2 2.9 3 0 0 3 3 3 0 CCCH zinc finger in TRM13 protein Glyco_hydro_49N PF17433.2 NODE_61353_length_267_cov_1.491379_g53413_i0forward_frame_3 - 0.19 11.4 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 49 N-terminal Ig-like domain PQQ_3 PF13570.6 NODE_61346_length_267_cov_1.689655_g53406_i0forward_frame_3 - 0.085 13.4 0.1 0.15 12.6 0.1 1.4 1 0 0 1 1 1 0 PQQ-like domain EamA PF00892.20 NODE_61345_length_267_cov_1.702586_g53405_i0forward_frame_3 - 0.001 19.3 0.7 0.0013 19.0 0.7 1.2 1 0 0 1 1 1 1 EamA-like transporter family Trp_oprn_chp PF09534.10 NODE_61345_length_267_cov_1.702586_g53405_i0forward_frame_3 - 0.068 13.0 0.1 0.1 12.4 0.1 1.3 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF2670 PF10875.8 NODE_61344_length_267_cov_1.706897_g53404_i0reverse_frame_2 - 0.09 12.9 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) cNMP_binding PF00027.29 NODE_61344_length_267_cov_1.706897_g53404_i0forward_frame_2 - 4.2e-05 23.5 0.0 9.1e-05 22.5 0.0 1.6 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain PDDEXK_3 PF13366.6 NODE_61344_length_267_cov_1.706897_g53404_i0forward_frame_2 - 0.022 15.1 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Tsc35 PF15079.6 NODE_61344_length_267_cov_1.706897_g53404_i0forward_frame_2 - 0.028 14.0 0.1 0.031 13.9 0.1 1.1 1 0 0 1 1 1 0 Testis-specific protein 35 PPARgamma_N PF12577.8 NODE_61344_length_267_cov_1.706897_g53404_i0forward_frame_2 - 0.085 13.5 0.0 0.098 13.3 0.0 1.2 1 0 0 1 1 1 0 PPAR gamma N-terminal region MORN PF02493.20 NODE_61342_length_267_cov_1.724138_g53402_i0forward_frame_2 - 6e-18 63.6 14.6 2.9e-08 33.1 0.1 3.4 4 0 0 4 4 4 3 MORN repeat DUF3048_C PF17479.2 NODE_61342_length_267_cov_1.724138_g53402_i0forward_frame_2 - 0.031 14.7 2.9 0.05 14.0 2.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain MORN_2 PF07661.13 NODE_61342_length_267_cov_1.724138_g53402_i0forward_frame_2 - 0.062 13.6 3.0 0.095 13.0 0.9 2.5 2 0 0 2 2 2 0 MORN repeat variant Ribosomal_L37e PF01907.19 NODE_61336_length_267_cov_1.862069_g53396_i0forward_frame_3 - 0.22 11.7 0.1 0.22 11.7 0.1 2.1 2 0 0 2 2 2 0 Ribosomal protein L37e Rubredoxin_2 PF18073.1 NODE_61336_length_267_cov_1.862069_g53396_i0forward_frame_3 - 0.25 11.1 0.4 0.25 11.1 0.4 2.8 4 0 0 4 4 4 0 Rubredoxin metal binding domain SRC-1 PF08832.10 NODE_61331_length_267_cov_1.939655_g53391_i0forward_frame_2 - 0.041 14.9 0.4 0.047 14.7 0.4 1.4 1 1 0 1 1 1 0 Steroid receptor coactivator DUF2339 PF10101.9 NODE_61330_length_267_cov_1.943966_g53390_i0forward_frame_3 - 0.0038 15.9 1.0 0.0038 15.9 1.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2339) GF_recep_IV PF14843.6 NODE_61330_length_267_cov_1.943966_g53390_i0forward_frame_2 - 0.54 10.1 5.2 0.83 9.5 5.2 1.5 1 1 0 1 1 1 0 Growth factor receptor domain IV DUF1634 PF07843.11 NODE_61329_length_267_cov_1.943966_g53389_i0forward_frame_2 - 0.081 13.0 3.9 0.084 13.0 3.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1634) Spc110_C PF18520.1 NODE_61328_length_267_cov_1.948276_g53388_i0reverse_frame_2 - 0.02 14.5 0.7 0.031 13.9 0.3 1.5 1 1 0 1 1 1 0 Spindle pole body component 110 C-terminal domain TMF_DNA_bd PF12329.8 NODE_61328_length_267_cov_1.948276_g53388_i0reverse_frame_2 - 0.036 14.1 4.4 0.049 13.6 4.4 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF5643 PF18705.1 NODE_61326_length_267_cov_1.961207_g53386_i0reverse_frame_3 - 0.077 13.0 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5643) Peptidase_C92 PF05708.12 NODE_61324_length_267_cov_2.008621_g53384_i0reverse_frame_2 - 0.072 13.2 0.1 0.081 13.0 0.1 1.1 1 0 0 1 1 1 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family FAM199X PF15814.5 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_2 - 0.77 8.7 6.0 0.82 8.7 6.0 1.0 1 0 0 1 1 1 0 Protein family FAM199X Terminase_5 PF06056.12 NODE_61321_length_267_cov_2.017241_g53381_i0reverse_frame_2 - 0.13 12.2 0.1 0.29 11.0 0.1 1.6 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) PHM7_cyt PF14703.6 NODE_61318_length_267_cov_2.068966_g53378_i0reverse_frame_2 - 0.0035 17.6 0.0 0.0048 17.2 0.0 1.2 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter DUF1461 PF07314.11 NODE_61309_length_267_cov_2.202586_g53369_i0forward_frame_2 - 0.084 12.8 4.0 0.095 12.6 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) DUF1247 PF06851.11 NODE_61307_length_267_cov_2.318966_g53367_i0reverse_frame_2 - 0.016 15.2 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) DUF5010 PF16402.5 NODE_61307_length_267_cov_2.318966_g53367_i0forward_frame_3 - 0.11 11.3 0.0 0.13 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5010) Aldedh PF00171.22 NODE_61305_length_267_cov_2.383621_g53365_i0reverse_frame_2 - 2.5e-29 102.1 0.1 2.7e-29 102.0 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Thiolase_C PF02803.18 NODE_61300_length_267_cov_2.487069_g53360_i0reverse_frame_2 - 0.11 12.2 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Thiolase, C-terminal domain TCR PF03638.15 NODE_61299_length_267_cov_2.538793_g53359_i0reverse_frame_3 - 2e-07 31.2 9.7 2.7e-07 30.8 9.7 1.2 1 0 0 1 1 1 1 Tesmin/TSO1-like CXC domain, cysteine-rich domain Sec16_C PF12931.7 NODE_61296_length_267_cov_2.659483_g53356_i0reverse_frame_2 - 0.017 14.8 0.0 0.019 14.6 0.0 1.0 1 0 0 1 1 1 0 Sec23-binding domain of Sec16 NCU-G1 PF15065.6 NODE_61296_length_267_cov_2.659483_g53356_i0reverse_frame_2 - 0.022 13.8 0.3 0.024 13.7 0.3 1.0 1 0 0 1 1 1 0 Lysosomal transcription factor, NCU-G1 BLM10_mid PF16507.5 NODE_61296_length_267_cov_2.659483_g53356_i0reverse_frame_2 - 0.027 13.1 0.6 0.03 13.0 0.6 1.0 1 0 0 1 1 1 0 Proteasome-substrate-size regulator, mid region Dynein_heavy PF03028.15 NODE_61293_length_267_cov_2.689655_g53353_i0reverse_frame_3 - 0.051 13.7 0.7 0.066 13.3 0.7 1.2 1 0 0 1 1 1 0 Dynein heavy chain region D6 P-loop domain GAD-like PF08887.11 NODE_61292_length_267_cov_2.818966_g53352_i0forward_frame_3 - 0.11 12.3 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 GAD-like domain DUF5568 PF17724.1 NODE_61292_length_267_cov_2.818966_g53352_i0forward_frame_2 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5568) DUF1953 PF09196.10 NODE_61290_length_267_cov_2.887931_g53350_i0reverse_frame_2 - 0.097 12.5 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1953) DUF5638 PF18688.1 NODE_61290_length_267_cov_2.887931_g53350_i0forward_frame_3 - 0.015 15.6 0.8 0.019 15.3 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5638) FSH1 PF03959.13 NODE_61285_length_267_cov_3.573276_g53345_i0reverse_frame_2 - 0.0023 17.6 0.0 0.0028 17.3 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) FSH1 PF03959.13 NODE_61284_length_267_cov_3.573276_g53344_i0reverse_frame_2 - 8.7e-06 25.5 0.0 1.1e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) RNR_N PF08343.10 NODE_61284_length_267_cov_3.573276_g53344_i0reverse_frame_2 - 0.086 12.9 4.9 0.16 12.0 4.9 1.5 1 1 0 1 1 1 0 Ribonucleotide reductase N-terminal DUF1856 PF08983.10 NODE_61281_length_267_cov_4.534483_g53341_i0reverse_frame_2 - 0.34 11.2 9.5 0.068 13.4 5.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF1856) VATC PF18716.1 NODE_61277_length_267_cov_5.034483_g53337_i0reverse_frame_2 - 0.036 13.9 0.2 0.036 13.9 0.2 2.1 2 1 0 2 2 2 0 Vms1-associating treble clef domain RAMP4 PF06624.12 NODE_61271_length_267_cov_19.870690_g53331_i0forward_frame_2 - 1.9 8.6 5.0 0.82 9.8 3.0 1.6 1 1 0 1 1 1 0 Ribosome associated membrane protein RAMP4 DUF4491 PF14898.6 NODE_61271_length_267_cov_19.870690_g53331_i0forward_frame_2 - 2.2 8.8 6.8 2.7 8.5 6.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) DUF3043 PF11241.8 NODE_61271_length_267_cov_19.870690_g53331_i0forward_frame_2 - 7.8 6.5 5.5 8.5 6.4 5.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) tify PF06200.14 NODE_61270_length_267_cov_35.728448_g53330_i0reverse_frame_2 - 0.23 10.8 0.0 0.36 10.2 0.0 1.3 1 0 0 1 1 1 0 tify domain DUF4649 PF15507.6 NODE_61269_length_267_cov_39.918103_g53329_i0forward_frame_3 - 0.18 11.8 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4649) TMEM171 PF15471.6 NODE_61259_length_267_cov_63.706897_g53319_i0reverse_frame_3 - 0.2 10.6 0.1 0.23 10.4 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein family 171 FeoB_N PF02421.18 NODE_61258_length_267_cov_64.732759_g53318_i0reverse_frame_2 - 0.049 13.2 0.1 0.083 12.4 0.0 1.4 1 1 0 1 1 1 0 Ferrous iron transport protein B DUF5090 PF17009.5 NODE_61257_length_267_cov_66.202586_g53317_i0reverse_frame_2 - 2.7 7.9 10.4 3 7.8 10.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF1633 PF07794.11 NODE_61254_length_267_cov_68.241379_g53314_i0forward_frame_3 - 0.12 10.5 3.7 0.13 10.4 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) DUF5090 PF17009.5 NODE_61250_length_267_cov_79.646552_g53310_i0forward_frame_2 - 1.3 9.0 9.2 1.8 8.5 9.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Apolipo_F PF15148.6 NODE_61248_length_267_cov_81.172414_g53308_i0forward_frame_3 - 0.028 13.9 0.7 0.03 13.8 0.7 1.1 1 0 0 1 1 1 0 Apolipoprotein F Rep_4 PF05797.11 NODE_61242_length_267_cov_105.629310_g53302_i0forward_frame_3 - 0.11 11.6 0.3 0.13 11.4 0.3 1.0 1 0 0 1 1 1 0 Yeast trans-acting factor (REP1/REP2) Bacillus_HBL PF05791.11 NODE_61234_length_267_cov_135.017241_g53294_i0forward_frame_3 - 0.016 15.0 1.7 0.02 14.7 1.7 1.1 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) Gag_p30 PF02093.16 NODE_61234_length_267_cov_135.017241_g53294_i0forward_frame_3 - 0.054 13.0 0.0 0.062 12.8 0.0 1.1 1 0 0 1 1 1 0 Gag P30 core shell protein Orf78 PF06024.12 NODE_61232_length_267_cov_152.418103_g53292_i0forward_frame_2 - 0.047 14.0 4.2 0.054 13.8 4.2 1.2 1 0 0 1 1 1 0 Orf78 (ac78) SpvB PF03534.13 NODE_61231_length_267_cov_161.461207_g53291_i0reverse_frame_3 - 0.045 12.9 0.0 0.045 12.9 0.0 1.0 1 0 0 1 1 1 0 Salmonella virulence plasmid 65kDa B protein ArfGap PF01412.18 NODE_61231_length_267_cov_161.461207_g53291_i0reverse_frame_3 - 0.097 12.8 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf WD40 PF00400.32 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 4.3e-09 36.8 0.2 5.3e-06 27.1 0.1 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 2.2e-05 24.7 0.1 0.00097 19.4 0.0 1.7 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 0.0021 17.9 0.0 0.0022 17.9 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 0.0057 16.0 0.0 0.0064 15.9 0.0 1.0 1 0 0 1 1 1 1 WD40-like domain PALB2_WD40 PF16756.5 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 0.12 11.3 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Partner and localizer of BRCA2 WD40 domain bacHORMA_2 PF18173.1 NODE_61225_length_267_cov_280.474138_g53285_i0forward_frame_2 - 0.2 11.5 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial HORMA domain 2 E_raikovi_mat PF06360.11 NODE_61224_length_267_cov_283.163793_g53284_i0reverse_frame_3 - 0.059 13.8 1.4 0.096 13.1 1.4 1.3 1 0 0 1 1 1 0 Euplotes raikovi mating pheromone GDP_Man_Dehyd PF16363.5 NODE_61218_length_267_cov_1963.956897_g53278_i0forward_frame_2 - 2e-05 24.2 0.0 2.2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_61218_length_267_cov_1963.956897_g53278_i0forward_frame_2 - 0.0007 19.1 0.0 0.00081 18.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family FeoB_Cyto PF17910.1 NODE_61218_length_267_cov_1963.956897_g53278_i0forward_frame_2 - 0.012 16.2 0.0 0.014 15.9 0.0 1.1 1 0 0 1 1 1 0 FeoB cytosolic helical domain NAD_binding_4 PF07993.12 NODE_61218_length_267_cov_1963.956897_g53278_i0forward_frame_2 - 0.14 11.3 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 Male sterility protein DUF3915 PF13054.6 ORF99944 - 0.19 11.7 7.3 0.24 11.4 7.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) zf-RING_2 PF13639.6 ORF99879 - 6.6e-14 52.0 4.6 8.7e-14 51.6 4.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF99879 - 2.9e-09 36.6 6.1 4e-09 36.2 6.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF99879 - 3.2e-09 36.9 6.0 6e-09 36.1 6.0 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF99879 - 6.3e-08 32.4 4.9 9.3e-08 31.8 4.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF99879 - 1.6e-07 31.1 3.2 2.2e-07 30.6 3.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF99879 - 3.3e-07 30.0 4.8 4.6e-07 29.6 4.8 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 ORF99879 - 4.7e-07 29.4 1.5 8.2e-07 28.7 1.5 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF99879 - 1.5e-06 28.1 4.0 2.9e-06 27.1 4.2 1.4 1 1 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF99879 - 2.8e-06 27.3 4.8 4.4e-06 26.6 4.8 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING-like PF08746.11 ORF99879 - 0.00016 21.9 3.8 0.00023 21.4 3.8 1.3 1 0 0 1 1 1 1 RING-like domain zf-ANAPC11 PF12861.7 ORF99879 - 0.00078 19.4 4.8 0.0059 16.6 4.8 2.1 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF99879 - 0.0023 17.5 5.1 0.004 16.7 5.1 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF99879 - 0.017 15.2 3.5 0.039 14.1 3.5 1.6 1 1 0 1 1 1 0 RING-variant domain Zf_RING PF16744.5 ORF99879 - 0.043 13.9 2.5 0.085 13.0 2.6 1.5 1 1 0 1 1 1 0 KIAA1045 RING finger zf-RING_10 PF16685.5 ORF99879 - 0.063 13.4 3.8 0.083 13.0 3.8 1.1 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-Nse PF11789.8 ORF99879 - 0.064 13.1 1.5 0.087 12.7 1.5 1.2 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_4 PF14570.6 ORF99879 - 0.11 12.3 3.2 0.24 11.2 3.3 1.6 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF99879 - 0.15 12.3 5.9 0.46 10.7 6.0 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 ORF99879 - 0.54 10.5 5.0 1.3 9.3 5.0 1.7 1 1 0 1 1 1 0 FANCL C-terminal domain Na_H_antiport_3 PF07399.11 ORF99505 - 0.48 9.2 6.6 0.51 9.2 6.6 1.0 1 0 0 1 1 1 0 Putative Na+/H+ antiporter DUF3331 PF11811.8 ORF99261 - 0.17 11.7 0.9 0.24 11.3 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) Cellulose_synt PF03552.14 ORF99233 - 0.051 12.1 0.2 0.056 11.9 0.2 1.0 1 0 0 1 1 1 0 Cellulose synthase DUF2866 PF11065.8 ORF98757 - 0.021 14.9 0.0 0.033 14.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2866) FKBP_N_2 PF18023.1 ORF98318 - 0.02 15.0 0.2 0.021 14.9 0.2 1.3 1 1 0 1 1 1 0 BDBT FKBP like N-terminal RRM_1 PF00076.22 ORF9820 - 0.093 12.6 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ZapB PF06005.12 ORF98114 - 0.011 16.1 8.2 0.011 16.1 8.2 1.5 1 1 0 1 1 1 0 Cell division protein ZapB HIP1_clath_bdg PF16515.5 ORF98114 - 0.064 13.9 3.8 0.081 13.5 3.8 1.1 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF5488 PF17590.2 ORF96856 - 0.038 13.7 0.6 0.11 12.3 0.0 1.9 2 1 0 2 2 2 0 Family of unknown function (DUF5488) DUF1077 PF06417.12 ORF96521 - 0.048 13.7 2.9 0.06 13.4 2.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1077) YitT_membrane PF02588.15 ORF96449 - 0.015 14.6 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VASt PF16016.5 ORF96381 - 0.088 13.2 0.7 0.12 12.7 0.7 1.3 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain Tenui_PVC2 PF06656.11 ORF96292 - 0.069 11.0 1.3 0.074 10.9 1.3 1.0 1 0 0 1 1 1 0 Tenuivirus PVC2 protein DUF4922 PF16269.5 ORF95984 - 0.023 14.5 0.1 0.023 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4922) UPF0154 PF03672.13 ORF95598 - 0.0092 16.0 2.8 0.0097 15.9 1.2 2.0 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0154) DUF3678 PF12435.8 ORF95488 - 0.14 11.6 0.1 0.14 11.6 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3678) DUF5465 PF17553.2 ORF95488 - 0.64 10.7 5.3 3.2 8.5 1.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5465) DSPc PF00782.20 ORF94053 - 2.2e-15 56.6 0.0 2.4e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF94053 - 0.0089 15.6 0.0 0.0092 15.6 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 ORF94053 - 0.016 15.2 0.0 0.016 15.2 0.0 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family Peptidase_M10 PF00413.24 ORF94053 - 0.023 14.6 0.0 0.03 14.2 0.0 1.2 1 1 0 1 1 1 0 Matrixin PTPlike_phytase PF14566.6 ORF94053 - 0.1 12.7 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate Herpes_pp85 PF04637.12 ORF93833 - 1.5 7.1 2.6 1.6 7.0 2.6 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Ras PF00071.22 ORF9375 - 1.3e-14 54.1 0.0 1.6e-14 53.9 0.0 1.1 1 0 0 1 1 1 1 Ras family vATP-synt_E PF01991.18 ORF93626 - 6.6e-12 45.2 0.1 7.3e-12 45.1 0.1 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit Rop-like PF05082.13 ORF93626 - 0.062 13.1 0.1 0.1 12.5 0.1 1.4 1 0 0 1 1 1 0 Rop-like FAM199X PF15814.5 ORF93466 - 1.3 8.0 7.0 1.5 7.8 7.0 1.0 1 0 0 1 1 1 0 Protein family FAM199X Glycos_transf_2 PF00535.26 ORF92710 - 0.086 12.6 0.0 0.094 12.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF1700 PF08006.11 ORF92272 - 2.6 7.5 9.4 4.5 6.8 9.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1700) LRRC37AB_C PF14914.6 ORF92047 - 0.0013 18.6 0.3 0.0017 18.3 0.3 1.0 1 0 0 1 1 1 1 LRRC37A/B like protein 1 C-terminal domain DUF2273 PF10031.9 ORF92047 - 0.0066 16.4 0.8 0.0099 15.9 0.8 1.3 1 0 0 1 1 1 1 Small integral membrane protein (DUF2273) DUF3899 PF13038.6 ORF92047 - 0.0091 16.5 0.0 0.011 16.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3899) ETRAMP PF09716.10 ORF92047 - 0.15 12.2 1.0 0.22 11.6 1.0 1.5 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Fe-S_biosyn PF01521.20 ORF91413 - 0.043 14.0 0.5 0.05 13.8 0.5 1.2 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis SelP_N PF04592.14 ORF91314 - 0.083 12.3 26.1 0.09 12.2 26.1 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Zip PF02535.22 ORF91314 - 0.3 10.2 6.6 0.29 10.3 6.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter CbtA PF09490.10 ORF91314 - 0.33 10.7 4.7 0.34 10.7 4.7 1.1 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtA) Fe-S_biosyn PF01521.20 ORF91174 - 0.043 14.0 0.5 0.05 13.8 0.5 1.2 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis DUF2574 PF10836.8 ORF91116 - 0.077 12.9 0.0 0.088 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) AD PF09793.9 ORF90672 - 0.025 14.7 0.0 2.2 8.5 0.0 2.1 2 0 0 2 2 2 0 Anticodon-binding domain CAF1 PF04857.20 ORF90453 - 6e-05 22.4 0.1 6e-05 22.4 0.1 1.7 2 0 0 2 2 2 1 CAF1 family ribonuclease YqbF PF14553.6 ORF90453 - 0.041 13.7 0.1 0.093 12.6 0.1 1.6 1 0 0 1 1 1 0 YqbF, hypothetical protein domain Cation_ATPase_N PF00690.26 ORF90029 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus U71 PF17474.2 ORF89702 - 0.12 12.4 1.1 0.17 11.9 0.1 1.7 2 0 0 2 2 2 0 Tegument protein UL11 homolog Cation_ATPase_N PF00690.26 ORF89526 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Pyr_redox_3 PF13738.6 ORF89291 - 0.028 13.7 0.0 0.03 13.6 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase PDZ_6 PF17820.1 ORF89224 - 3.6e-05 23.5 0.4 5.5e-05 22.9 0.4 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 ORF89224 - 0.00097 19.4 0.2 0.0011 19.2 0.2 1.2 1 1 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF89224 - 0.078 13.3 0.2 0.11 12.9 0.2 1.3 1 1 0 1 1 1 0 PDZ domain NP1-WLL PF11733.8 ORF88848 - 0.052 13.3 1.9 0.056 13.2 1.9 1.1 1 0 0 1 1 1 0 Non-capsid protein NP1 RmlD_sub_bind PF04321.17 ORF88756 - 0.0027 16.8 0.0 0.0027 16.8 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Cation_ATPase_N PF00690.26 ORF88602 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus GHL13 PF14883.6 ORF88529 - 0.036 13.1 0.0 0.04 13.0 0.0 1.0 1 0 0 1 1 1 0 Hypothetical glycosyl hydrolase family 13 Piezo_RRas_bdg PF12166.8 ORF88430 - 1.5e-09 37.7 0.5 1.5e-09 37.7 0.5 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain RE_NgoPII PF09521.10 ORF88430 - 0.014 14.6 0.3 0.016 14.4 0.3 1.1 1 0 0 1 1 1 0 NgoPII restriction endonuclease G6PD_bact PF10786.9 ORF88035 - 0.095 12.2 2.0 0.11 12.1 2.0 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) CPV_Polyhedrin PF17515.2 ORF87834 - 0.0013 18.2 0.1 0.0014 18.1 0.1 1.1 1 0 0 1 1 1 1 Cypovirus polyhedrin EF-hand_6 PF13405.6 ORF8746 - 0.0059 16.4 0.3 0.027 14.4 0.1 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF8746 - 0.01 15.3 1.1 0.046 13.3 0.1 2.3 2 0 0 2 2 2 0 EF hand EF-hand_5 PF13202.6 ORF8746 - 0.048 13.2 1.0 0.048 13.2 1.0 2.4 2 1 0 2 2 2 0 EF hand EF-hand_7 PF13499.6 ORF8746 - 0.13 12.7 0.3 0.24 11.9 0.1 1.7 2 1 0 2 2 2 0 EF-hand domain pair AtpR PF12966.7 ORF87001 - 0.13 12.7 0.2 0.16 12.4 0.2 1.2 1 0 0 1 1 1 0 N-ATPase, AtpR subunit DUF1700 PF08006.11 ORF86216 - 2.6 7.5 9.4 4.5 6.8 9.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1700) FeThRed_B PF02943.15 ORF86067 - 0.076 13.0 0.2 0.17 11.9 0.2 1.6 1 1 1 2 2 2 0 Ferredoxin thioredoxin reductase catalytic beta chain Curto_V2 PF07325.11 ORF86017 - 0.017 15.0 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Curtovirus V2 protein Clathrin PF00637.20 ORF85968 - 1.4e-14 54.1 0.0 1.5e-14 54.1 0.0 1.0 1 0 0 1 1 1 1 Region in Clathrin and VPS Coatomer_WDAD PF04053.14 ORF85968 - 0.027 13.5 0.0 0.028 13.5 0.0 1.2 1 0 0 1 1 1 0 Coatomer WD associated region IL15 PF02372.15 ORF85937 - 0.054 13.5 0.1 0.059 13.4 0.1 1.1 1 0 0 1 1 1 0 Interleukin 15 HYLS1_C PF15311.6 ORF85937 - 0.059 14.1 0.4 0.43 11.3 0.0 2.0 1 1 1 2 2 2 0 Hydrolethalus syndrome protein 1 C-terminus HPS3_N PF14761.6 ORF85937 - 0.068 12.7 0.2 0.08 12.5 0.2 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3 Sec23_helical PF04815.15 ORF85822 - 0.032 14.0 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 Sec23/Sec24 helical domain PNTB PF02233.16 ORF85822 - 0.076 11.9 0.3 0.072 12.0 0.3 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit Nrf1_DNA-bind PF10491.9 ORF8554 - 0.2 11.3 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 Aa_trans PF01490.18 ORF85451 - 0.00018 20.4 1.9 0.0002 20.2 1.9 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein XhlA PF10779.9 ORF85339 - 0.026 14.7 1.9 0.043 14.0 1.9 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Fib_alpha PF08702.10 ORF85339 - 0.06 13.5 3.4 0.056 13.6 2.8 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_S49_N PF08496.10 ORF85339 - 0.18 11.8 1.3 0.21 11.6 1.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Ins145_P3_rec PF08709.11 ORF85306 - 9.7e-14 51.1 0.1 1.2e-13 50.8 0.1 1.1 1 0 0 1 1 1 1 Inositol 1,4,5-trisphosphate/ryanodine receptor Imm57 PF15596.6 ORF85232 - 0.12 12.7 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 57 DUF1479 PF07350.12 ORF84946 - 0.12 11.1 0.1 0.13 10.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) DUF5460 PF17544.2 ORF84514 - 0.0088 15.1 0.1 0.0099 14.9 0.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5460) Phage_ASH PF10554.9 ORF83960 - 0.045 14.1 0.1 0.052 13.9 0.1 1.2 1 0 0 1 1 1 0 Ash protein family COX7C PF02935.16 ORF83960 - 0.057 13.7 0.1 1.3 9.3 0.3 2.1 1 1 1 2 2 2 0 Cytochrome c oxidase subunit VIIc Sgf11 PF08209.11 ORF83439 - 0.12 12.0 2.8 0.38 10.4 0.1 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Thioredoxin PF00085.20 ORF83331 - 5.8e-06 26.2 0.1 6.9e-06 26.0 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 ORF83331 - 0.017 15.3 0.1 0.025 14.8 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like AhpC-TSA PF00578.21 ORF83331 - 0.09 12.7 0.1 0.11 12.4 0.1 1.3 1 1 0 1 1 1 0 AhpC/TSA family KOW PF00467.29 ORF83208 - 2.2e-06 27.4 1.5 0.00032 20.5 0.2 2.3 2 0 0 2 2 2 2 KOW motif KN17_SH3 PF18131.1 ORF83208 - 0.014 15.5 0.4 5.4 7.2 0.0 2.1 2 0 0 2 2 2 0 KN17 SH3-like C-terminal domain DUF3912 PF13051.6 ORF83208 - 0.062 13.6 0.2 0.11 12.8 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3912) DUF5516 PF17637.2 ORF83082 - 4.3 7.2 8.7 0.12 12.1 1.9 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5516) tRNA-synt_2 PF00152.20 ORF82836 - 0.08 12.0 1.8 0.085 11.9 1.8 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) AD PF09793.9 ORF82785 - 0.025 14.7 0.0 2.2 8.5 0.0 2.1 2 0 0 2 2 2 0 Anticodon-binding domain Phage_holin_1 PF04531.13 ORF82444 - 0.31 11.6 1.9 1.9 9.1 0.1 2.1 1 1 1 2 2 2 0 Bacteriophage holin FAM70 PF14967.6 ORF82444 - 0.65 9.4 2.7 0.72 9.3 2.7 1.0 1 0 0 1 1 1 0 FAM70 protein MHYT PF03707.16 ORF82444 - 9.8 6.4 11.5 0.3 11.3 1.9 2.3 1 1 1 2 2 2 0 Bacterial signalling protein N terminal repeat DEAD PF00270.29 ORF82429 - 0.00037 20.3 0.0 0.00054 19.8 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase BLI1 PF17324.2 ORF82429 - 0.01 16.5 1.6 0.015 15.9 1.6 1.2 1 1 0 1 1 1 1 BLOC-1 interactor 1 YvbH_ext PF11724.8 ORF82429 - 0.022 15.0 0.1 0.035 14.4 0.0 1.4 1 1 0 1 1 1 0 YvbH-like oligomerisation region Antimicrobial_7 PF08102.11 ORF82429 - 0.083 13.1 1.2 0.22 11.8 1.2 1.7 1 1 0 1 1 1 0 Scorpion antimicrobial peptide Chitin_synth_1 PF01644.17 ORF82299 - 1.3e-16 61.0 0.1 1.6e-16 60.7 0.1 1.1 1 0 0 1 1 1 1 Chitin synthase DCAF17 PF15802.5 ORF82019 - 0.36 9.5 2.5 0.39 9.4 2.5 1.0 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 17 HRXXH PF13933.6 ORF81603 - 0.11 12.1 1.6 0.13 11.9 1.6 1.0 1 0 0 1 1 1 0 Putative peptidase family CRA PF06589.11 ORF81603 - 0.9 9.7 10.5 0.37 10.9 8.1 1.5 1 1 0 1 1 1 0 Circumsporozoite-related antigen (CRA) PRKCSH-like PF12999.7 ORF81603 - 2.3 8.0 7.6 3.1 7.6 7.6 1.3 1 0 0 1 1 1 0 Glucosidase II beta subunit-like CRISPR_Cas2 PF09827.9 ORF8160 - 0.097 12.9 0.0 0.15 12.2 0.0 1.5 1 1 0 1 1 1 0 CRISPR associated protein Cas2 HTH_10 PF04967.12 ORF81496 - 0.064 13.1 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 HTH DNA binding domain QH-AmDH_gamma PF08992.11 ORF81112 - 0.044 13.8 0.2 0.059 13.4 0.2 1.2 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, gamma subunit RtcB PF01139.17 ORF80425 - 0.00044 19.6 0.0 0.00049 19.4 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Ly-6_related PF06579.12 ORF80284 - 0.0089 16.3 0.3 0.064 13.5 0.1 1.9 2 0 0 2 2 2 1 Caenorhabditis elegans ly-6-related protein Kazal_1 PF00050.21 ORF80284 - 0.015 15.3 0.2 5.8 7.0 0.0 2.2 2 0 0 2 2 2 0 Kazal-type serine protease inhibitor domain Integrase_H2C2 PF17921.1 ORF80284 - 0.061 13.4 0.7 4.4 7.5 0.1 2.3 2 0 0 2 2 2 0 Integrase zinc binding domain Ribosomal_S14 PF00253.21 ORF80284 - 0.23 11.2 2.4 14 5.6 0.1 2.5 2 1 0 2 2 2 0 Ribosomal protein S14p/S29e DUF1211 PF06736.11 ORF80204 - 0.0071 16.8 0.1 0.0084 16.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1211) SKG6 PF08693.10 ORF80204 - 5.1 6.6 6.6 33 4.0 0.0 2.4 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Neurochondrin PF05536.11 ORF8006 - 0.059 11.7 0.0 0.067 11.6 0.0 1.0 1 0 0 1 1 1 0 Neurochondrin RRM_1 PF00076.22 ORF79190 - 2.8e-06 27.1 0.7 8.1e-06 25.6 0.0 2.0 3 0 0 3 3 3 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SET_assoc PF11767.8 ORF79190 - 0.00058 19.5 0.0 0.0012 18.5 0.0 1.5 1 0 0 1 1 1 1 Histone lysine methyltransferase SET associated E1_dh PF00676.20 ORF79190 - 0.0023 16.9 0.4 0.0026 16.7 0.4 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component tRNA-synt_2 PF00152.20 ORF79127 - 0.08 12.0 1.8 0.085 11.9 1.8 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) DUF3071 PF11268.8 ORF78991 - 0.031 14.3 0.0 0.035 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3071) TTL PF03133.15 ORF78589 - 0.0041 16.3 1.1 0.0085 15.3 0.0 1.9 2 1 0 2 2 2 1 Tubulin-tyrosine ligase family DUF1647 PF07801.11 ORF78589 - 0.05 13.4 1.1 0.11 12.3 1.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1647) Pkinase_Tyr PF07714.17 ORF7821 - 0.0001 21.7 0.2 0.00014 21.2 0.2 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF7821 - 0.00038 19.9 0.0 0.00043 19.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain MukF_M PF17192.4 ORF7821 - 0.12 12.1 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 MukF middle domain zf-C3HC4_2 PF13923.6 ORF78167 - 0.0074 16.1 3.2 0.016 15.0 3.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) NnrS PF05940.12 ORF7805 - 0.022 14.2 0.2 0.022 14.2 0.2 1.1 1 0 0 1 1 1 0 NnrS protein ChW PF07538.11 ORF77810 - 0.0054 16.6 0.5 0.042 13.8 0.1 2.1 2 0 0 2 2 2 1 Clostridial hydrophobic W Fe-S_biosyn PF01521.20 ORF77102 - 0.043 14.0 0.5 0.05 13.8 0.5 1.2 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis DUF5020 PF16412.5 ORF7692 - 0.14 12.0 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5020) Dexa_ind PF15198.6 ORF76740 - 0.1 12.7 0.4 0.15 12.1 0.4 1.3 1 0 0 1 1 1 0 Dexamethasone-induced MFS_1 PF07690.16 ORF7613 - 0.0035 16.3 1.4 0.0036 16.3 1.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Ras PF00071.22 ORF75492 - 2.8e-10 40.0 0.1 3.3e-10 39.8 0.1 1.1 1 0 0 1 1 1 1 Ras family Chitin_synth_1 PF01644.17 ORF75209 - 1.3e-16 61.0 0.1 1.6e-16 60.7 0.1 1.1 1 0 0 1 1 1 1 Chitin synthase DNA_pol_lambd_f PF10391.9 ORF75001 - 0.11 12.3 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda Piezo_RRas_bdg PF12166.8 ORF73524 - 9.4e-09 35.0 0.2 9.7e-09 35.0 0.2 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF2530 PF10745.9 ORF73245 - 0.047 13.9 0.5 0.06 13.6 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2530) UbiA PF01040.18 ORF71695 - 1.8e-14 53.6 0.0 1.8e-14 53.6 0.0 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family CAP PF00188.26 ORF71494 - 0.012 16.5 0.0 0.013 16.3 0.0 1.1 1 0 0 1 1 1 0 Cysteine-rich secretory protein family RIF5_SNase_1 PF18187.1 ORF7142 - 0.077 12.7 0.0 0.08 12.7 0.0 1.1 1 0 0 1 1 1 0 TbRIF5 SNase domain 1 Fzo_mitofusin PF04799.13 ORF71215 - 0.017 14.7 0.2 0.017 14.7 0.2 1.1 1 0 0 1 1 1 0 fzo-like conserved region CCDC92 PF14916.6 ORF71215 - 0.05 13.4 2.3 0.12 12.1 2.3 1.7 1 1 0 1 1 1 0 Coiled-coil domain of unknown function DUF2264 PF10022.9 ORF71215 - 0.056 12.5 0.1 0.066 12.3 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2264) PEARLI-4 PF05278.12 ORF71215 - 0.11 12.1 2.5 0.12 12.0 2.5 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) DUF4260 PF14079.6 ORF71080 - 0.052 13.5 0.2 0.072 13.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4260) Clr5 PF14420.6 ORF70538 - 0.071 13.4 0.0 0.11 12.7 0.0 1.5 1 1 0 1 1 1 0 Clr5 domain HTH_51 PF18558.1 ORF70408 - 0.087 12.7 0.0 0.15 11.9 0.0 1.4 2 0 0 2 2 2 0 Helix-turn-helix domain Herpes_gI PF01688.17 ORF70180 - 0.077 12.9 0.9 0.083 12.8 0.9 1.1 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein I OstA PF03968.14 ORF70173 - 6.6e-11 42.4 0.1 1e-10 41.8 0.1 1.3 1 0 0 1 1 1 1 OstA-like protein Ras PF00071.22 ORF70083 - 3e-06 26.9 0.0 3.8e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Arf PF00025.21 ORF70083 - 0.00056 19.4 0.0 0.00066 19.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF70083 - 0.019 14.5 0.1 0.024 14.2 0.1 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Transcript_VP30 PF11507.8 ORF68717 - 0.061 13.4 0.0 0.07 13.2 0.0 1.1 1 0 0 1 1 1 0 Ebola virus-specific transcription factor VP30 GAS2 PF02187.17 ORF68259 - 4.3e-06 26.7 0.5 7.2e-06 26.0 0.1 1.6 1 1 1 2 2 2 1 Growth-Arrest-Specific Protein 2 Domain Adenine_glyco PF03352.13 ORF68259 - 0.0019 18.0 0.1 0.0019 18.0 0.1 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase DUF4710 PF15828.5 ORF68259 - 0.024 14.7 0.1 0.037 14.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DUF4051 PF13260.6 ORF68259 - 0.082 12.6 0.3 0.14 11.9 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) HTH_51 PF18558.1 ORF67412 - 0.087 12.7 0.0 0.15 11.9 0.0 1.4 2 0 0 2 2 2 0 Helix-turn-helix domain 7TM_GPCR_Srj PF10319.9 ORF67259 - 0.024 14.0 0.4 0.024 14.0 0.4 1.6 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srj DUF2610 PF11020.8 ORF66938 - 0.098 12.5 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) PGI PF00342.19 ORF66365 - 0.16 10.5 0.0 0.17 10.5 0.0 1.0 1 0 0 1 1 1 0 Phosphoglucose isomerase CAP160 PF07918.11 ORF66311 - 0.1 12.3 2.4 0.28 11.0 0.4 2.2 2 0 0 2 2 2 0 CAP160 repeat DUF2058 PF09831.9 ORF66135 - 0.52 10.4 9.7 0.62 10.2 9.7 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2058) DIRP PF06584.13 ORF65042 - 0.098 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 DIRP MAAL_C PF07476.11 ORF64723 - 0.06 12.5 0.2 0.14 11.3 0.1 1.6 1 1 1 2 2 2 0 Methylaspartate ammonia-lyase C-terminus Maf_N PF08383.11 ORF64697 - 0.024 14.4 0.0 0.055 13.3 0.0 1.6 1 0 0 1 1 1 0 Maf N-terminal region DUF1368 PF07112.11 ORF64665 - 0.021 13.7 6.3 0.022 13.6 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1368) MCR PF18509.1 ORF64499 - 0.17 11.5 0.5 0.17 11.5 0.5 2.9 3 0 0 3 3 3 0 Magnetochrome domain DUF3783 PF12646.7 ORF64236 - 0.34 10.9 1.6 0.43 10.6 0.7 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3783) Ribonuclease_T2 PF00445.18 ORF64171 - 1.5e-13 51.4 1.9 1.7e-13 51.2 1.9 1.2 1 0 0 1 1 1 1 Ribonuclease T2 family Furin-like_2 PF15913.5 ORF64171 - 2e-06 27.9 0.5 2.4e-06 27.7 0.5 1.2 1 0 0 1 1 1 1 Furin-like repeat, cysteine-rich PriCT_2 PF08707.11 ORF64171 - 0.01 16.2 0.7 0.017 15.5 0.5 1.4 1 1 0 1 1 1 0 Primase C terminal 2 (PriCT-2) DUF4579 PF15158.6 ORF63620 - 0.28 10.9 2.2 0.33 10.7 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) Sdh5 PF03937.16 ORF6339 - 2.7e-25 88.1 0.4 3.1e-25 87.9 0.4 1.0 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase YbjN PF10722.9 ORF6339 - 0.0045 17.1 0.0 0.0051 16.9 0.0 1.1 1 0 0 1 1 1 1 Putative bacterial sensory transduction regulator RE_XamI PF09572.10 ORF6339 - 0.041 13.6 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 XamI restriction endonuclease CC2D2AN-C2 PF15625.6 ORF63310 - 0.013 15.2 0.4 0.017 14.9 0.4 1.2 1 0 0 1 1 1 0 CC2D2A N-terminal C2 domain HsbA PF12296.8 ORF63310 - 0.02 15.3 0.0 0.024 15.1 0.0 1.1 1 0 0 1 1 1 0 Hydrophobic surface binding protein A CRA PF06589.11 ORF63310 - 0.065 13.3 8.8 0.081 13.0 8.8 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) Ribosomal_L18_c PF14204.6 ORF63310 - 0.099 13.6 7.7 0.11 13.4 7.7 1.2 1 0 0 1 1 1 0 Ribosomal L18 C-terminal region DUF5582 PF17819.1 ORF63283 - 0.00057 20.4 0.5 0.00079 19.9 0.5 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5582) DUF5586 PF17824.1 ORF63283 - 0.00068 18.9 0.0 0.00078 18.7 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5586) EF-hand_6 PF13405.6 ORF63283 - 0.26 11.3 3.5 7.5 6.8 0.0 2.7 2 1 0 2 2 2 0 EF-hand domain DUF3143 PF11341.8 ORF6325 - 0.13 12.7 1.1 0.23 11.8 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3143) DUF2285 PF10074.9 ORF62921 - 0.021 15.4 0.0 0.033 14.8 0.0 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) TMEM240 PF15207.6 ORF62503 - 0.041 13.6 0.9 0.048 13.4 0.9 1.1 1 0 0 1 1 1 0 TMEM240 family DUF5356 PF17309.2 ORF62335 - 0.09 12.8 0.1 0.43 10.6 0.0 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5356) TOH_N PF12549.8 ORF62034 - 0.13 12.1 0.6 0.13 12.1 0.6 2.3 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal DUF4667 PF15700.5 ORF6144 - 0.32 11.1 2.0 0.35 10.9 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4667) DUF5637 PF18687.1 ORF6144 - 0.72 9.9 7.3 1.7 8.7 7.3 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5637) TMEM234 PF10639.9 ORF6109 - 0.037 14.1 2.0 0.039 14.0 1.9 1.2 1 1 0 1 1 1 0 Putative transmembrane family 234 adh_short PF00106.25 ORF6109 - 0.081 12.4 0.1 0.096 12.1 0.1 1.1 1 0 0 1 1 1 0 short chain dehydrogenase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks273.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks273.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks273.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks273.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:15 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NAP PF00956.18 ORF5958 - 0.0012 18.1 0.2 0.0013 18.0 0.2 1.1 1 0 0 1 1 1 1 Nucleosome assembly protein (NAP) TMEM154 PF15102.6 ORF5958 - 0.057 13.3 0.0 0.07 13.0 0.0 1.3 1 1 0 1 1 1 0 TMEM154 protein family Sod_Ni PF09055.11 ORF5958 - 0.094 13.3 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Nickel-containing superoxide dismutase TraU PF06834.11 ORF5926 - 0.0043 16.4 0.1 0.0043 16.4 0.1 1.0 1 0 0 1 1 1 1 TraU protein Cation_ATPase_N PF00690.26 ORF59209 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cyclin PF08613.11 ORF58998 - 0.0033 17.8 1.0 0.0033 17.8 1.0 1.5 2 0 0 2 2 2 1 Cyclin Tho2 PF11262.8 ORF58998 - 0.0058 15.9 0.7 0.0065 15.7 0.7 1.1 1 0 0 1 1 1 1 Transcription factor/nuclear export subunit protein 2 EFG_C PF00679.24 ORF58826 - 2.1e-26 91.8 0.1 2.3e-26 91.6 0.1 1.0 1 0 0 1 1 1 1 Elongation factor G C-terminus SF3a60_bindingd PF12108.8 ORF58544 - 0.032 14.1 1.4 0.057 13.3 1.4 1.5 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain Salt_tol_Pase PF09506.10 ORF58544 - 0.16 10.7 3.6 0.15 10.8 3.6 1.0 1 0 0 1 1 1 0 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) VP40 PF07447.12 ORF5816 - 0.097 11.8 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Matrix protein VP40 DUF5589 PF17672.1 ORF58122 - 0.11 12.5 0.9 0.11 12.4 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5589) MDM31_MDM32 PF08118.11 ORF58106 - 0.091 11.4 0.6 0.11 11.2 0.6 1.0 1 0 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins CbiK PF06180.11 ORF57955 - 0.011 15.1 0.2 0.014 14.8 0.2 1.1 1 0 0 1 1 1 0 Cobalt chelatase (CbiK) LPP20 PF02169.16 ORF57955 - 0.037 14.4 0.2 0.042 14.2 0.2 1.2 1 0 0 1 1 1 0 LPP20 lipoprotein FYVE_2 PF02318.16 ORF57955 - 0.17 12.1 2.1 0.56 10.4 2.1 1.8 1 1 0 1 1 1 0 FYVE-type zinc finger Aa_trans PF01490.18 ORF57839 - 0.00018 20.4 1.9 0.0002 20.2 1.9 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Cation_ATPase_N PF00690.26 ORF56913 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus SRC-1 PF08832.10 ORF56834 - 0.035 15.2 0.2 0.088 13.9 0.1 1.7 2 0 0 2 2 2 0 Steroid receptor coactivator DUF4094 PF13334.6 ORF56622 - 0.54 10.7 4.0 0.92 10.0 4.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) GST_C_2 PF13410.6 ORF56584 - 3.1e-05 23.9 0.0 3.8e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF56584 - 4.1e-05 23.3 0.0 5.4e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF56584 - 0.00015 21.9 0.0 0.00017 21.8 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF56584 - 0.0057 16.8 0.0 0.0068 16.6 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain TM140 PF14985.6 ORF56448 - 0.069 12.7 1.4 0.071 12.6 1.4 1.1 1 0 0 1 1 1 0 TM140 protein family Cation_ATPase_N PF00690.26 ORF56381 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase_N PF00690.26 ORF56242 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus AAA-ATPase_like PF09820.9 ORF56096 - 0.3 10.5 0.0 0.37 10.1 0.0 1.1 1 0 0 1 1 1 0 Predicted AAA-ATPase MGTL PF17059.5 ORF5587 - 2.4e-09 36.5 8.6 3.7e-09 35.8 8.6 1.3 1 0 0 1 1 1 1 MgtA leader peptide PDR_assoc PF08370.11 ORF5587 - 5.9 6.7 6.8 1.2 8.9 0.8 2.2 1 1 0 2 2 2 0 Plant PDR ABC transporter associated AP3D1 PF06375.11 ORF55685 - 2.3 8.4 19.1 2.8 8.1 19.1 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF4603 PF15376.6 ORF55685 - 9.1 3.5 14.4 9.3 3.5 14.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) MCCD1 PF15707.5 ORF53922 - 0.072 13.5 0.2 0.1 13.0 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial coiled-coil domain protein 1 GST_C_2 PF13410.6 ORF53576 - 0.071 13.1 0.4 0.19 11.7 0.4 1.7 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain WD40 PF00400.32 ORF53573 - 6.9e-06 26.7 0.0 2.6e-05 24.9 0.0 1.8 2 0 0 2 2 2 1 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF53573 - 0.084 11.8 0.0 0.084 11.8 0.0 1.0 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein HCV_NS5a PF01506.19 ORF53563 - 0.014 15.2 0.8 0.021 14.7 0.8 1.3 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a protein membrane anchor Transketolase_C PF02780.20 ORF53523 - 2.3e-12 46.9 0.0 2.6e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Transketolase, C-terminal domain BRCT_3 PF18428.1 ORF53330 - 0.11 12.6 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain CM2 PF03021.14 ORF52860 - 0.018 14.9 0.0 0.019 14.8 0.0 1.0 1 0 0 1 1 1 0 Influenza C virus M2 protein GnsAB_toxin PF08178.11 ORF5243 - 0.0054 16.6 0.1 0.0081 16.1 0.1 1.2 1 0 0 1 1 1 1 GnsA/GnsB toxin of bacterial toxin-antitoxin system PmrD PF11183.8 ORF52388 - 1.5e-40 137.2 0.3 1.7e-40 137.0 0.3 1.0 1 0 0 1 1 1 1 Polymyxin resistance protein PmrD Zw10 PF06248.13 ORF5207 - 0.0025 16.5 3.1 0.0027 16.3 3.1 1.0 1 0 0 1 1 1 1 Centromere/kinetochore Zw10 Exonuc_VII_L PF02601.15 ORF5207 - 0.0066 16.1 3.6 0.0073 15.9 3.6 1.0 1 0 0 1 1 1 1 Exonuclease VII, large subunit ERp29 PF07749.12 ORF5207 - 0.0099 16.8 2.0 0.011 16.6 2.0 1.1 1 0 0 1 1 1 1 Endoplasmic reticulum protein ERp29, C-terminal domain APG17 PF04108.12 ORF5207 - 0.013 14.6 1.7 0.015 14.5 1.7 1.0 1 0 0 1 1 1 0 Autophagy protein Apg17 DUF4495 PF14906.6 ORF5207 - 0.015 14.4 0.3 0.015 14.4 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4495) DUF2205 PF10224.9 ORF5207 - 0.015 15.3 2.5 0.024 14.6 0.8 2.0 1 1 1 2 2 2 0 Short coiled-coil protein Syntaxin_2 PF14523.6 ORF5207 - 0.023 15.1 6.3 0.029 14.7 6.3 1.1 1 0 0 1 1 1 0 Syntaxin-like protein Ribosomal_L12_N PF16320.5 ORF5207 - 0.063 13.0 0.5 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain HIP1_clath_bdg PF16515.5 ORF5207 - 0.088 13.4 3.5 0.11 13.2 3.5 1.1 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DASH_Duo1 PF08651.10 ORF5207 - 0.091 12.6 3.6 0.06 13.1 1.4 1.8 2 0 0 2 2 2 0 DASH complex subunit Duo1 Endonuc-BglII PF09195.11 ORF5207 - 0.097 12.5 1.2 0.16 11.8 1.2 1.5 1 1 0 1 1 1 0 Restriction endonuclease BglII MRP-S32 PF10210.9 ORF5207 - 0.098 13.2 3.9 0.11 13.0 2.2 1.7 1 1 1 2 2 2 0 Mitochondrial 28S ribosomal protein S32 DUF1128 PF06569.11 ORF5207 - 0.12 12.3 3.7 0.19 11.7 3.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1128) TMPIT PF07851.13 ORF5207 - 0.26 10.5 7.7 0.28 10.4 7.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein LMBR1 PF04791.16 ORF5207 - 0.77 8.6 5.2 0.92 8.3 5.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein PP2C_C PF07830.13 ORF5207 - 0.78 10.2 3.9 2 8.9 0.6 2.0 1 1 1 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain Imm42 PF15593.6 ORF52031 - 0.29 11.6 1.7 0.35 11.3 1.7 1.1 1 0 0 1 1 1 0 Immunity protein 42 FAM199X PF15814.5 ORF51020 - 1.3 8.0 7.0 1.5 7.8 7.0 1.0 1 0 0 1 1 1 0 Protein family FAM199X DUF3071 PF11268.8 ORF50855 - 0.031 14.3 0.0 0.035 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3071) GPR15L PF15854.5 ORF49888 - 0.73 10.1 3.5 3.2 8.0 0.1 2.1 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 DUF2726 PF10881.8 ORF49881 - 0.059 13.3 0.7 0.079 12.8 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2726) MNSV_P7B PF06692.11 ORF4976 - 0.036 14.0 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Melon necrotic spot virus P7B protein Sigma70_r3 PF04539.16 ORF49714 - 0.0072 16.4 0.0 0.013 15.6 0.0 1.3 1 0 0 1 1 1 1 Sigma-70 region 3 DUF842 PF05811.13 ORF49491 - 0.0043 16.8 3.0 0.0051 16.5 1.5 1.8 1 1 1 2 2 2 1 Eukaryotic protein of unknown function (DUF842) VAPB_antitox PF02697.14 ORF49491 - 0.029 15.2 1.4 0.036 14.8 0.5 1.7 1 1 0 1 1 1 0 Putative antitoxin DDE_Tnp_1_2 PF13586.6 ORF49491 - 0.062 13.7 0.2 0.089 13.2 0.2 1.4 1 1 0 1 1 1 0 Transposase DDE domain OmpH PF03938.14 ORF49491 - 0.071 13.4 13.1 0.16 12.3 12.9 1.7 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Lipoprotein_16 PF03923.13 ORF49491 - 0.094 12.4 2.4 1.7 8.3 0.3 2.0 1 1 1 2 2 2 0 Uncharacterized lipoprotein YabA PF06156.13 ORF49491 - 0.12 13.0 4.7 0.16 12.7 4.7 1.2 1 0 0 1 1 1 0 Initiation control protein YabA DHR10 PF18595.1 ORF49491 - 0.13 12.4 8.7 0.27 11.3 4.1 2.0 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain CotJB PF12652.7 ORF49491 - 0.13 12.5 0.8 0.13 12.5 0.8 2.3 1 1 1 2 2 2 0 CotJB protein DUF2959 PF11172.8 ORF49491 - 0.13 12.3 7.0 0.13 12.3 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2959) Mer2 PF09074.10 ORF49491 - 0.2 11.4 5.6 0.22 11.3 5.6 1.1 1 0 0 1 1 1 0 Mer2 CREPT PF16566.5 ORF49491 - 0.27 11.4 8.0 0.53 10.5 0.7 2.0 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Mod_r PF07200.13 ORF49491 - 0.42 10.7 11.8 3.3 7.8 11.8 2.0 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein DUF4404 PF14357.6 ORF49491 - 0.46 11.2 2.9 0.95 10.1 2.9 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) TMPIT PF07851.13 ORF49491 - 0.49 9.6 8.6 0.52 9.5 8.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein FapA PF03961.13 ORF49491 - 0.9 8.1 9.1 0.92 8.0 9.1 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A BST2 PF16716.5 ORF49491 - 1 10.0 8.0 0.29 11.7 4.1 1.9 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 YtxH PF12732.7 ORF49491 - 1.1 9.9 5.0 13 6.4 5.0 2.3 1 1 0 1 1 1 0 YtxH-like protein TarH PF02203.15 ORF49491 - 1.1 9.1 6.0 1.2 9.0 6.0 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue Exonuc_VII_L PF02601.15 ORF49491 - 1.8 8.1 5.3 1.7 8.1 5.3 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF2408 PF10303.9 ORF49491 - 2.4 8.7 8.1 1.9 9.0 1.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) FlxA PF14282.6 ORF49491 - 5.9 6.9 11.0 16 5.6 10.9 1.8 1 1 1 2 2 2 0 FlxA-like protein Sec23_helical PF04815.15 ORF48968 - 0.032 14.0 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 Sec23/Sec24 helical domain PNTB PF02233.16 ORF48968 - 0.076 11.9 0.3 0.072 12.0 0.3 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit Baculo_E56 PF04639.12 ORF48402 - 0.13 11.5 1.4 0.14 11.5 1.4 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope DUF29 PF01724.16 ORF48164 - 0.085 13.1 0.1 8.1 6.7 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function DUF29 DsrD PF08679.11 ORF48045 - 0.025 14.8 0.0 0.039 14.2 0.0 1.4 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) FKBP_C PF00254.28 ORF47587 - 0.054 13.8 0.0 0.064 13.6 0.0 1.2 1 0 0 1 1 1 0 FKBP-type peptidyl-prolyl cis-trans isomerase Sec23_helical PF04815.15 ORF47170 - 0.032 14.0 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 Sec23/Sec24 helical domain PNTB PF02233.16 ORF47170 - 0.076 11.9 0.3 0.072 12.0 0.3 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit DUF2530 PF10745.9 ORF46831 - 0.047 13.9 0.5 0.06 13.6 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2530) Dfp1_Him1_M PF08630.10 ORF46743 - 0.19 11.9 0.0 0.26 11.5 0.0 1.1 1 0 0 1 1 1 0 Dfp1/Him1, central region Malt_amylase_C PF16657.5 ORF46673 - 8.8e-05 22.5 0.1 0.00011 22.2 0.1 1.2 1 0 0 1 1 1 1 Maltogenic Amylase, C-terminal domain DUF3459 PF11941.8 ORF46673 - 0.0025 18.1 0.0 0.0028 18.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Alpha-amylase_C PF02806.18 ORF46673 - 0.14 12.7 0.4 0.16 12.5 0.4 1.3 1 1 0 1 1 1 0 Alpha amylase, C-terminal all-beta domain Cyc-maltodext_C PF10438.9 ORF46673 - 0.18 11.9 0.1 0.28 11.3 0.1 1.2 1 0 0 1 1 1 0 Cyclo-malto-dextrinase C-terminal domain EF-hand_4 PF12763.7 ORF46321 - 1.1e-10 41.4 0.1 1.3e-10 41.2 0.1 1.0 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_1 PF00036.32 ORF46321 - 0.0004 19.7 0.3 0.014 14.9 0.0 2.2 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF46321 - 0.00064 19.5 0.3 0.0037 17.1 0.1 2.0 1 1 1 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF46321 - 0.053 14.0 0.3 0.77 10.3 0.0 2.0 1 1 1 2 2 2 0 EF-hand domain pair DUF2507 PF10702.9 ORF46321 - 0.066 13.1 0.2 0.081 12.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2507) SWIRM PF04433.17 ORF46321 - 0.1 12.9 0.0 0.23 11.8 0.0 1.5 1 1 1 2 2 2 0 SWIRM domain HisK_sensor PF18698.1 ORF45382 - 0.058 13.8 0.3 0.071 13.5 0.3 1.1 1 0 0 1 1 1 0 Histidine kinase sensor domain EHN PF06441.12 ORF45363 - 0.049 14.0 0.8 0.061 13.7 0.8 1.2 1 0 0 1 1 1 0 Epoxide hydrolase N terminus DUF2951 PF11166.8 ORF45224 - 0.87 9.8 6.4 2.9 8.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) DUF3739 PF12545.8 ORF44271 - 0.081 13.4 0.0 0.098 13.1 0.0 1.3 1 1 0 1 1 1 0 Filamentous haemagglutinin family outer membrane protein Kinesin PF00225.23 ORF43476 - 6.5e-27 94.3 1.2 7e-27 94.2 1.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Syntaxin-18_N PF10496.9 ORF43476 - 0.059 13.6 0.1 0.078 13.2 0.0 1.3 1 1 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus Trimer_CC PF08954.11 ORF43357 - 0.15 11.6 0.9 0.29 10.7 0.0 1.8 2 0 0 2 2 2 0 Trimerisation motif Nrf1_DNA-bind PF10491.9 ORF42078 - 0.2 11.3 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 Sigma_reg_C PF13791.6 ORF40619 - 0.003 17.8 0.6 0.0032 17.7 0.6 1.0 1 0 0 1 1 1 1 Sigma factor regulator C-terminal IHHNV_capsid PF16530.5 ORF39717 - 0.05 12.7 0.1 0.05 12.7 0.1 1.0 1 0 0 1 1 1 0 Infectious hypodermal and haematopoietic necrosis virus, capsid SmpA_OmlA PF04355.13 ORF39717 - 0.21 11.4 1.6 0.66 9.8 0.1 1.9 1 1 1 2 2 2 0 SmpA / OmlA family DUF5488 PF17590.2 ORF39613 - 0.038 13.7 0.6 0.11 12.3 0.0 1.9 2 1 0 2 2 2 0 Family of unknown function (DUF5488) Prefoldin_2 PF01920.20 ORF39453 - 4.3e-12 45.9 1.2 4.7e-12 45.8 1.2 1.0 1 0 0 1 1 1 1 Prefoldin subunit Rx_N PF18052.1 ORF39453 - 0.0083 16.4 0.9 0.031 14.5 0.4 1.8 2 0 0 2 2 2 1 Rx N-terminal domain AAA_28 PF13521.6 ORF39365 - 0.046 14.0 0.0 0.068 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain PBSX_XtrA PF17356.2 ORF39365 - 0.22 11.5 0.2 0.95 9.4 0.1 2.0 2 0 0 2 2 2 0 Phage-like element PBSX protein XtrA Ly-6_related PF06579.12 ORF38615 - 0.0089 16.3 0.3 0.064 13.5 0.1 1.9 2 0 0 2 2 2 1 Caenorhabditis elegans ly-6-related protein Kazal_1 PF00050.21 ORF38615 - 0.015 15.3 0.2 5.8 7.0 0.0 2.2 2 0 0 2 2 2 0 Kazal-type serine protease inhibitor domain Integrase_H2C2 PF17921.1 ORF38615 - 0.061 13.4 0.7 4.4 7.5 0.1 2.3 2 0 0 2 2 2 0 Integrase zinc binding domain Ribosomal_S14 PF00253.21 ORF38615 - 0.23 11.2 2.4 14 5.6 0.1 2.5 2 1 0 2 2 2 0 Ribosomal protein S14p/S29e Orthopox_A5L PF06193.11 ORF38201 - 0.053 13.0 0.3 0.056 12.9 0.3 1.1 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like TMEM239 PF15841.5 ORF38201 - 0.11 12.4 2.1 0.14 12.0 2.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family HTH_22 PF13309.6 ORF37984 - 0.049 13.7 0.5 0.84 9.8 0.1 2.1 1 1 1 2 2 2 0 HTH domain DUF4579 PF15158.6 ORF37801 - 0.28 10.9 2.2 0.33 10.7 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) DUF5460 PF17544.2 ORF37563 - 0.0088 15.1 0.1 0.0099 14.9 0.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5460) DUF1980 PF09323.10 ORF37561 - 0.088 12.7 1.1 0.1 12.5 1.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Couple_hipA PF13657.6 ORF36525 - 0.027 15.1 0.0 0.035 14.8 0.0 1.1 1 0 0 1 1 1 0 HipA N-terminal domain CsoS2_M PF12288.8 ORF36007 - 0.049 13.0 0.1 0.056 12.9 0.1 1.0 1 0 0 1 1 1 0 Carboxysome shell peptide mid-region DUF2244 PF10003.9 ORF36007 - 0.092 12.4 0.3 0.099 12.3 0.3 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) DUF2951 PF11166.8 ORF3568 - 0.87 9.8 6.4 2.9 8.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) DUF2254 PF10011.9 ORF34676 - 0.093 11.5 0.2 0.11 11.4 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Nup214_FG PF18617.1 ORF34399 - 0.0096 16.4 1.2 0.015 15.8 1.2 1.3 1 0 0 1 1 1 1 Nucleoporin Nup214 phenylalanine-glycine (FG) domain Corona_3 PF04694.12 ORF34399 - 0.17 12.3 0.5 0.28 11.6 0.0 1.6 2 0 0 2 2 2 0 Coronavirus ORF3 protein Thiolase_N PF00108.23 ORF34148 - 0.036 13.4 0.0 0.04 13.3 0.0 1.0 1 0 0 1 1 1 0 Thiolase, N-terminal domain ENTH PF01417.20 ORF33890 - 0.12 12.4 0.1 0.16 12.0 0.1 1.1 1 0 0 1 1 1 0 ENTH domain PDDEXK_3 PF13366.6 ORF33685 - 0.038 14.3 0.1 0.047 14.0 0.1 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Tetraspanin PF00335.20 ORF33310 - 1.7e-07 31.2 5.5 1.7e-07 31.2 5.5 1.0 1 0 0 1 1 1 1 Tetraspanin family Phage_holin_3_6 PF07332.11 ORF33310 - 0.25 11.4 2.1 0.26 11.4 2.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4131 PF13567.6 ORF33310 - 1.3 8.7 4.2 1.4 8.5 4.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Ferritin PF00210.24 ORF33187 - 0.023 14.6 0.3 0.028 14.4 0.3 1.1 1 0 0 1 1 1 0 Ferritin-like domain DIOX_N PF14226.6 ORF33187 - 0.024 15.4 0.3 0.026 15.3 0.3 1.1 1 0 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal Tad PF13400.6 ORF32224 - 0.007 16.7 0.1 0.007 16.7 0.1 2.0 2 0 0 2 2 2 1 Putative Flp pilus-assembly TadE/G-like LysR_substrate PF03466.20 ORF31172 - 0.025 13.9 0.0 0.029 13.7 0.0 1.1 1 0 0 1 1 1 0 LysR substrate binding domain EF-hand_1 PF00036.32 ORF29251 - 1.4e-06 27.4 0.2 3e-06 26.4 0.1 1.6 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF29251 - 3.1e-06 26.7 0.1 7.9e-06 25.4 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF29251 - 0.00053 20.4 0.2 0.0011 19.4 0.0 1.6 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF29251 - 0.00074 18.9 0.4 0.0015 18.0 0.4 1.5 1 0 0 1 1 1 1 EF hand Caleosin PF05042.13 ORF29251 - 0.041 13.8 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Caleosin related protein DUF5134 PF17197.4 ORF29120 - 0.02 14.8 2.0 0.024 14.6 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5134) Autophagy_C PF10381.9 ORF29030 - 1.2 8.7 7.6 0.56 9.8 1.9 2.4 2 0 0 2 2 2 0 Autophagocytosis associated protein C-terminal ATG16 PF08614.11 ORF28384 - 0.00054 20.3 1.3 0.00083 19.6 1.3 1.3 1 1 0 1 1 1 1 Autophagy protein 16 (ATG16) FliL PF03748.14 ORF28384 - 0.0026 18.3 2.3 0.0088 16.6 1.1 1.9 1 1 1 2 2 2 1 Flagellar basal body-associated protein FliL LemA PF04011.12 ORF28384 - 0.015 15.1 0.2 0.021 14.7 0.2 1.2 1 0 0 1 1 1 0 LemA family tRNA-synt_1g PF09334.11 ORF28384 - 0.048 12.4 0.2 0.052 12.3 0.2 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) FAD_SOX PF18371.1 ORF28384 - 0.07 13.5 0.1 0.082 13.3 0.1 1.1 1 0 0 1 1 1 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase POTRA PF07244.15 ORF28384 - 0.49 11.0 3.3 7.5 7.2 0.6 2.1 1 1 1 2 2 2 0 Surface antigen variable number repeat Piezo_RRas_bdg PF12166.8 ORF28038 - 1.5e-09 37.7 0.5 1.5e-09 37.7 0.5 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain RE_NgoPII PF09521.10 ORF28038 - 0.014 14.6 0.3 0.016 14.4 0.3 1.1 1 0 0 1 1 1 0 NgoPII restriction endonuclease YccV-like PF08755.11 ORF27905 - 3.2e-08 34.0 0.0 4.3e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Hemimethylated DNA-binding protein YccV like DUF1560 PF07597.11 ORF27905 - 0.2 11.7 0.0 0.29 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1560) PHD_2 PF13831.6 ORF27898 - 0.056 13.0 0.2 0.11 12.0 0.2 1.5 1 0 0 1 1 1 0 PHD-finger DMPK_coil PF08826.10 ORF27227 - 0.0086 16.2 0.6 0.022 14.9 0.3 1.9 1 1 1 2 2 2 1 DMPK coiled coil domain like SbsC_C PF18058.1 ORF27227 - 0.076 13.2 2.7 2.7 8.2 0.5 1.9 1 1 1 2 2 2 0 SbsC C-terminal domain STE PF02200.16 ORF2718 - 0.13 12.7 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 STE like transcription factor Nrf1_DNA-bind PF10491.9 ORF26726 - 0.2 11.3 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 Pkinase PF00069.25 ORF26458 - 0.016 14.6 0.2 0.061 12.7 0.0 1.8 1 1 1 2 2 2 0 Protein kinase domain KapB PF08810.10 ORF26251 - 0.063 13.4 0.2 0.076 13.2 0.2 1.1 1 0 0 1 1 1 0 Kinase associated protein B Noelin-1 PF12308.8 ORF26251 - 0.08 12.9 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Neurogenesis glycoprotein CAP PF00188.26 ORF25997 - 0.012 16.5 0.0 0.013 16.3 0.0 1.1 1 0 0 1 1 1 0 Cysteine-rich secretory protein family CoA_trans PF01144.23 ORF25908 - 0.0014 18.1 0.1 0.0015 17.9 0.1 1.1 1 0 0 1 1 1 1 Coenzyme A transferase betaPIX_CC PF16523.5 ORF25908 - 0.063 13.1 0.1 0.096 12.5 0.1 1.4 1 0 0 1 1 1 0 betaPIX coiled coil DUF4866 PF16160.5 ORF25891 - 0.17 11.2 0.1 0.18 11.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4866) GIT_CC PF16559.5 ORF25843 - 0.00038 20.3 2.3 0.00055 19.8 2.3 1.3 1 0 0 1 1 1 1 GIT coiled-coil Rho guanine nucleotide exchange factor Gp-FAR-1 PF05823.12 ORF25843 - 0.0027 18.1 1.0 0.0032 17.8 1.0 1.1 1 0 0 1 1 1 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) FlaC_arch PF05377.11 ORF25843 - 0.0035 17.7 1.4 0.0059 17.0 1.4 1.3 1 0 0 1 1 1 1 Flagella accessory protein C (FlaC) TMCO5 PF14992.6 ORF25843 - 0.012 15.2 1.1 0.012 15.2 1.1 1.1 1 0 0 1 1 1 0 TMCO5 family CENP-H PF05837.12 ORF25843 - 0.025 15.0 0.3 0.027 14.9 0.3 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DivIC PF04977.15 ORF25843 - 0.026 14.3 4.4 0.036 13.9 4.4 1.2 1 0 0 1 1 1 0 Septum formation initiator Vps51 PF08700.11 ORF25843 - 0.033 14.3 1.4 0.055 13.5 1.4 1.3 1 0 0 1 1 1 0 Vps51/Vps67 XhlA PF10779.9 ORF25741 - 0.026 14.7 1.9 0.043 14.0 1.9 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Fib_alpha PF08702.10 ORF25741 - 0.06 13.5 3.4 0.056 13.6 2.8 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_S49_N PF08496.10 ORF25741 - 0.18 11.8 1.3 0.21 11.6 1.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal CCDC142 PF14923.6 ORF25642 - 0.016 14.0 0.1 0.016 14.0 0.1 1.0 1 0 0 1 1 1 0 Coiled-coil protein 142 CCDC32 PF14989.6 ORF25642 - 0.031 14.3 0.1 0.034 14.2 0.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing 32 Cyc-maltodext_C PF10438.9 ORF25642 - 0.073 13.2 0.4 0.094 12.8 0.4 1.2 1 0 0 1 1 1 0 Cyclo-malto-dextrinase C-terminal domain Ost4 PF10215.9 ORF23913 - 0.12 12.2 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Oligosaccaryltransferase Usher_TcfC PF17271.2 ORF23728 - 0.029 13.2 0.7 0.032 13.0 0.7 1.1 1 0 0 1 1 1 0 TcfC Usher-like barrel domain FAM199X PF15814.5 ORF23489 - 1.3 8.0 7.0 1.5 7.8 7.0 1.0 1 0 0 1 1 1 0 Protein family FAM199X Hpt PF01627.23 ORF22932 - 0.0003 21.0 0.0 0.00039 20.6 0.0 1.2 1 0 0 1 1 1 1 Hpt domain DUF2633 PF11119.8 ORF22443 - 1.8 8.5 4.0 1.3 9.0 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2633) Pup_ligase PF03136.15 ORF22400 - 0.1 11.6 0.2 0.1 11.6 0.2 1.0 1 0 0 1 1 1 0 Pup-ligase protein EF-hand_1 PF00036.32 ORF22261 - 0.00052 19.4 0.2 0.001 18.5 0.2 1.5 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF22261 - 0.019 14.8 0.1 0.034 14.0 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain pair Mistic PF11458.8 ORF22261 - 0.02 14.8 0.8 0.031 14.2 0.1 1.7 2 0 0 2 2 2 0 Membrane-integrating protein Mistic EF-hand_6 PF13405.6 ORF22261 - 0.02 14.8 0.2 0.035 14.0 0.2 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 ORF22261 - 0.035 14.5 0.0 0.046 14.2 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair DUF1479 PF07350.12 ORF21795 - 0.12 11.1 0.1 0.13 10.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) DUF2254 PF10011.9 ORF21239 - 0.087 11.6 0.2 0.096 11.5 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) CDV3 PF15359.6 ORF19863 - 0.052 14.0 1.5 0.067 13.7 1.5 1.1 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 Sigma_reg_C PF13791.6 ORF19075 - 0.0074 16.5 0.6 0.0086 16.3 0.6 1.0 1 0 0 1 1 1 1 Sigma factor regulator C-terminal Sigma54_activ_2 PF14532.6 ORF19067 - 0.047 13.8 0.0 0.057 13.5 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain tRNA_anti_2 PF13742.6 ORF19067 - 0.15 12.3 0.0 0.24 11.6 0.0 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Phage_T4_gp36 PF03903.13 ORF18811 - 0.079 12.9 0.5 0.092 12.7 0.5 1.1 1 0 0 1 1 1 0 Phage T4 tail fibre Kinesin PF00225.23 ORF18556 - 6.5e-27 94.3 1.2 7e-27 94.2 1.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Syntaxin-18_N PF10496.9 ORF18556 - 0.059 13.6 0.1 0.078 13.2 0.0 1.3 1 1 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus DUF1516 PF07457.11 ORF18037 - 0.004 17.3 2.2 0.0074 16.5 2.2 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF1516) NADHdh PF00146.21 ORF18037 - 0.0055 16.0 6.6 0.0065 15.8 6.6 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Fumarate_red_D PF02313.17 ORF18037 - 0.31 11.1 8.3 0.8 9.8 6.2 2.4 1 1 0 1 1 1 0 Fumarate reductase subunit D SUR7 PF06687.12 ORF18037 - 0.96 9.0 6.1 1 8.9 6.1 1.1 1 0 0 1 1 1 0 SUR7/PalI family Herpes_pp85 PF04637.12 ORF18007 - 1.5 7.1 2.6 1.6 7.0 2.6 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) zf-C2H2_10 PF16588.5 ORF17984 - 0.14 11.9 0.7 0.14 11.9 0.7 2.4 3 0 0 3 3 3 0 C2H2 zinc-finger DUF3071 PF11268.8 ORF17479 - 0.031 14.3 0.0 0.035 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3071) tRNA-synt_2 PF00152.20 ORF1720 - 0.08 12.0 1.8 0.085 11.9 1.8 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) Piezo_RRas_bdg PF12166.8 ORF16870 - 3.5e-09 36.5 0.4 3.7e-09 36.4 0.4 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain Prefoldin_2 PF01920.20 ORF16349 - 4.3e-12 45.9 1.2 4.7e-12 45.8 1.2 1.0 1 0 0 1 1 1 1 Prefoldin subunit Rx_N PF18052.1 ORF16349 - 0.0083 16.4 0.9 0.031 14.5 0.4 1.8 2 0 0 2 2 2 1 Rx N-terminal domain C1_2 PF03107.16 ORF1587 - 0.047 14.0 1.1 0.047 14.0 1.1 1.6 2 0 0 2 2 2 0 C1 domain LIM_bind PF01803.16 ORF15713 - 0.23 11.0 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein HscB_4_cys PF18256.1 ORF15708 - 0.25 11.2 0.4 0.25 11.2 0.4 1.6 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif XhlA PF10779.9 ORF15573 - 0.026 14.7 1.9 0.043 14.0 1.9 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Fib_alpha PF08702.10 ORF15573 - 0.06 13.5 3.4 0.056 13.6 2.8 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_S49_N PF08496.10 ORF15573 - 0.18 11.8 1.3 0.21 11.6 1.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal PDE4_UCR PF18100.1 ORF15309 - 0.017 15.8 2.9 0.017 15.7 2.9 1.0 1 0 0 1 1 1 0 Phosphodiesterase 4 upstream conserved regions (UCR) FeoB_Cyto PF17910.1 ORF15309 - 0.079 13.5 1.2 0.12 12.9 1.2 1.5 1 1 0 1 1 1 0 FeoB cytosolic helical domain DUF2633 PF11119.8 ORF15138 - 1.8 8.5 4.0 1.3 9.0 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2633) PLAC8 PF04749.17 ORF14266 - 0.00051 21.0 2.7 0.00072 20.5 2.7 1.2 1 0 0 1 1 1 1 PLAC8 family KASH_CCD PF14662.6 ORF14258 - 0.014 15.3 2.8 0.017 15.0 2.8 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH GIT_CC PF16559.5 ORF14258 - 0.022 14.6 4.3 0.13 12.1 2.2 2.1 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor HALZ PF02183.18 ORF14258 - 0.027 14.7 1.1 0.25 11.6 0.1 2.0 1 1 0 2 2 2 0 Homeobox associated leucine zipper CLZ PF16526.5 ORF14258 - 0.033 14.5 2.3 0.068 13.5 2.2 1.6 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels TSC22 PF01166.18 ORF14258 - 0.035 14.4 0.9 0.054 13.8 0.9 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family PI3K_P85_iSH2 PF16454.5 ORF14258 - 0.037 13.6 2.0 0.043 13.4 2.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF1640 PF07798.11 ORF14258 - 0.051 13.6 2.7 0.065 13.3 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DivIC PF04977.15 ORF14258 - 0.072 12.9 0.2 0.096 12.5 0.2 1.3 1 0 0 1 1 1 0 Septum formation initiator ZapB PF06005.12 ORF14258 - 0.091 13.2 1.9 0.12 12.9 1.9 1.2 1 0 0 1 1 1 0 Cell division protein ZapB bZIP_1 PF00170.21 ORF14258 - 0.097 12.8 1.1 0.27 11.4 0.7 1.7 1 1 1 2 2 2 0 bZIP transcription factor DivIVA PF05103.13 ORF14258 - 0.1 12.7 0.7 0.13 12.4 0.7 1.1 1 0 0 1 1 1 0 DivIVA protein FlaC_arch PF05377.11 ORF14258 - 0.12 12.8 0.4 0.55 10.7 0.2 1.8 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) BRE1 PF08647.11 ORF14258 - 0.14 12.2 3.4 0.17 11.9 3.4 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase Sec2p PF06428.11 ORF14258 - 0.16 11.9 3.5 0.2 11.6 3.5 1.1 1 0 0 1 1 1 0 GDP/GTP exchange factor Sec2p bZIP_2 PF07716.15 ORF14258 - 0.18 11.9 0.5 0.63 10.2 0.4 1.8 1 1 1 2 2 2 0 Basic region leucine zipper Ribosomal_60s PF00428.19 ORF13530 - 3.1e-15 56.5 2.6 3.7e-15 56.3 2.6 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein FoP_duplication PF13865.6 ORF13530 - 0.021 15.4 6.8 0.029 14.9 6.8 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 RPA_C PF08784.11 ORF13220 - 0.011 16.3 0.0 0.013 16.1 0.0 1.1 1 0 0 1 1 1 0 Replication protein A C terminal Cation_ATPase_N PF00690.26 ORF13185 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus CN_hydrolase PF00795.22 ORF13168 - 9.6e-16 57.9 0.0 1.1e-15 57.7 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Macro_2 PF14519.6 ORF12874 - 0.0098 15.3 0.1 0.011 15.1 0.1 1.0 1 0 0 1 1 1 1 Macro-like domain PHM7_cyt PF14703.6 ORF12810 - 0.0029 17.8 2.9 0.0036 17.5 2.9 1.1 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter TB2_DP1_HVA22 PF03134.19 ORF12810 - 0.29 11.1 4.0 0.34 10.9 4.0 1.3 1 1 0 1 1 1 0 TB2/DP1, HVA22 family AA_permease PF00324.21 ORF12800 - 9.9e-10 37.6 5.2 1e-09 37.5 5.2 1.0 1 0 0 1 1 1 1 Amino acid permease DUF996 PF06195.13 ORF12800 - 0.017 15.4 0.3 0.017 15.4 0.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF996) YwiC PF14256.6 ORF12800 - 0.047 14.0 6.7 0.052 13.9 6.7 1.1 1 0 0 1 1 1 0 YwiC-like protein MNSV_P7B PF06692.11 ORF12599 - 0.036 14.0 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Melon necrotic spot virus P7B protein Bestrophin PF01062.21 ORF12339 - 5.8e-08 32.5 0.1 6.4e-08 32.3 0.1 1.0 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel BDV_G PF06208.11 ORF12122 - 0.015 14.5 0.6 0.015 14.5 0.6 1.1 1 0 0 1 1 1 0 Borna disease virus G protein ACR_tran PF00873.19 ORF12 - 6.4e-36 123.5 5.5 7e-36 123.3 5.5 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family DUF2043 PF09740.9 ORF11871 - 0.079 13.6 0.1 0.089 13.5 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2043) MDH PF02315.16 ORF11871 - 1.2 9.3 4.2 2.1 8.4 0.0 2.1 1 1 1 2 2 2 0 Methanol dehydrogenase beta subunit DUF5488 PF17590.2 ORF11677 - 0.038 13.7 0.6 0.11 12.3 0.0 1.9 2 1 0 2 2 2 0 Family of unknown function (DUF5488) Tetraspanin PF00335.20 ORF11635 - 1.7e-07 31.2 5.5 1.7e-07 31.2 5.5 1.0 1 0 0 1 1 1 1 Tetraspanin family Phage_holin_3_6 PF07332.11 ORF11635 - 0.25 11.4 2.1 0.26 11.4 2.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4131 PF13567.6 ORF11635 - 1.3 8.7 4.2 1.4 8.5 4.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3445 PF11927.8 ORF11383 - 0.015 15.0 0.0 0.016 14.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3445) Transposase_28 PF04195.12 ORF11383 - 0.065 13.5 0.1 2.4 8.4 0.0 2.1 2 0 0 2 2 2 0 Putative gypsy type transposon NIPSNAP PF07978.13 ORF112302 - 0.068 13.4 0.5 0.084 13.1 0.5 1.2 1 0 0 1 1 1 0 NIPSNAP zf-C2H2 PF00096.26 ORF111777 - 4.7e-14 51.9 17.6 6.7e-06 26.3 3.0 3.1 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF111777 - 1.1e-12 47.8 7.4 6.5e-08 32.7 1.8 3.4 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF111777 - 7.1e-11 42.0 14.8 3e-05 24.5 2.5 3.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF111777 - 7.2e-06 25.7 3.5 0.00037 20.2 0.2 2.3 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-H2C2_5 PF13909.6 ORF111777 - 0.00057 19.6 6.5 0.00057 19.6 6.5 4.0 4 1 0 4 4 3 1 C2H2-type zinc-finger domain zf-C2HE PF16278.5 ORF111777 - 0.0007 20.0 3.6 0.0007 20.0 3.6 2.2 1 1 1 2 2 2 1 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_8 PF15909.5 ORF111777 - 0.0046 17.2 1.9 0.0046 17.2 1.9 2.0 1 1 0 1 1 1 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF111777 - 0.0095 16.3 12.9 0.047 14.1 1.5 2.7 3 0 0 3 3 3 2 Zinc-finger of C2H2 type GAGA PF09237.11 ORF111777 - 0.019 14.7 0.3 0.068 13.0 0.1 1.9 2 0 0 2 2 2 0 GAGA factor zf-BED PF02892.15 ORF111777 - 0.019 14.9 12.5 0.24 11.5 3.4 2.7 1 1 2 3 3 3 0 BED zinc finger DUF4764 PF15961.5 ORF111777 - 0.057 12.1 4.1 0.024 13.3 2.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4764) zf-Di19 PF05605.12 ORF111777 - 0.074 13.4 8.0 0.72 10.2 0.9 2.3 1 1 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Elf1 PF05129.13 ORF111777 - 0.1 12.6 4.0 0.19 11.8 4.0 1.5 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zf-C2H2_jaz PF12171.8 ORF111777 - 0.18 12.1 8.3 0.51 10.7 0.3 2.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-MYST PF17772.1 ORF111777 - 0.2 11.3 4.6 4.1 7.1 0.6 2.2 2 0 0 2 2 2 0 MYST family zinc finger domain zinc_ribbon_4 PF13717.6 ORF111777 - 0.22 11.5 3.4 2.2 8.3 0.1 2.6 2 1 1 3 3 3 0 zinc-ribbon domain C1_1 PF00130.22 ORF111777 - 0.24 11.3 6.7 0.21 11.5 4.2 2.3 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Ank_2 PF12796.7 ORF111575 - 6e-18 65.2 0.1 9.1e-18 64.6 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF111575 - 2.1e-17 63.2 0.2 4.3e-09 36.7 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF111575 - 9.9e-17 60.8 1.8 5.6e-07 29.7 0.1 2.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF111575 - 1.8e-15 56.6 2.1 1e-06 28.9 0.1 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF111575 - 9.4e-14 50.2 0.4 0.0065 16.9 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat VWA_3_C PF18571.1 ORF111575 - 1.3e-05 24.9 3.1 0.9 9.5 0.1 3.1 3 0 0 3 3 3 3 von Willebrand factor type A C-terminal domain PGI PF00342.19 ORF111436 - 0.16 10.5 0.0 0.17 10.5 0.0 1.0 1 0 0 1 1 1 0 Phosphoglucose isomerase OTT_1508_deam PF14441.6 ORF111096 - 0.49 10.4 3.3 0.89 9.6 3.3 1.5 1 1 0 1 1 1 0 OTT_1508-like deaminase MWFE PF15879.5 ORF110825 - 0.075 13.2 0.2 0.25 11.5 0.0 1.8 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase MWFE subunit Cation_ATPase_N PF00690.26 ORF110659 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus tRNA-synt_2 PF00152.20 ORF110355 - 0.08 12.0 1.8 0.085 11.9 1.8 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) Ada_Zn_binding PF02805.16 ORF108935 - 0.00076 19.5 0.3 0.0017 18.4 0.0 1.7 2 1 0 2 2 2 1 Metal binding domain of Ada Cation_ATPase_N PF00690.26 ORF108300 - 0.0025 17.5 0.0 0.0038 16.9 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Ribonuc_P_40 PF08584.11 ORF107987 - 1.2e-07 31.3 0.0 1.4e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease P 40kDa (Rpp40) subunit CbiN PF02553.15 ORF107739 - 0.011 15.6 0.7 0.018 15.0 0.2 1.6 1 1 1 2 2 2 0 Cobalt transport protein component CbiN Nucleoside_tran PF01733.18 ORF107739 - 0.05 13.0 0.0 0.056 12.8 0.0 1.0 1 0 0 1 1 1 0 Nucleoside transporter Presenilin PF01080.17 ORF107739 - 0.16 10.7 0.1 0.26 10.0 0.0 1.4 1 1 0 1 1 1 0 Presenilin Prenyltrans PF00432.21 ORF107739 - 0.2 11.4 0.0 0.28 11.0 0.0 1.2 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat RhoGEF67_u1 PF16615.5 ORF106752 - 5.7 7.5 9.5 0.32 11.6 2.5 2.4 2 1 1 3 3 3 0 Unstructured region one on RhoGEF 6 and 7 DUF816 PF05674.12 ORF106346 - 0.032 14.2 0.9 0.037 14.0 0.9 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF816) SipA_VBS PF17985.1 ORF10619 - 0.1 12.6 0.6 0.2 11.6 0.6 1.5 1 0 0 1 1 1 0 SipA vinculin binding site Lipoprotein_20 PF13942.6 ORF10619 - 0.15 12.0 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 YfhG lipoprotein Alpha-amyl_C PF09071.10 ORF105413 - 0.017 15.0 0.2 0.046 13.6 0.2 1.9 1 1 0 1 1 1 0 Alpha-amylase, C terminal DUF905 PF06006.12 ORF10499 - 0.11 12.5 0.1 0.18 11.8 0.0 1.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF905) BLOC1_2 PF10046.9 ORF104872 - 0.009 16.3 0.9 0.011 16.0 0.9 1.2 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sugarporin_N PF11471.8 ORF104872 - 0.016 15.2 4.6 0.55 10.2 1.8 2.6 1 1 1 2 2 2 0 Maltoporin periplasmic N-terminal extension DegS PF05384.11 ORF104872 - 0.043 13.3 1.1 0.055 13.0 1.1 1.1 1 0 0 1 1 1 0 Sensor protein DegS PLAC9 PF15205.6 ORF104872 - 0.053 13.9 0.1 0.087 13.2 0.1 1.3 1 0 0 1 1 1 0 Placenta-specific protein 9 TRPM_tetra PF16519.5 ORF104872 - 0.1 12.7 3.2 0.22 11.7 1.0 2.4 1 1 1 2 2 2 0 Tetramerisation domain of TRPM SlyX PF04102.12 ORF104872 - 0.1 13.2 0.2 0.1 13.2 0.2 2.7 1 1 2 3 3 3 0 SlyX BMFP PF04380.13 ORF104872 - 0.86 10.1 6.1 3.4 8.2 2.3 2.6 2 1 1 3 3 3 0 Membrane fusogenic activity MetOD2 PF18548.1 ORF104137 - 0.014 15.5 1.1 0.016 15.3 0.6 1.5 1 1 0 1 1 1 0 Metanogen output domain 2 MFS_1 PF07690.16 ORF103459 - 0.0035 16.3 1.4 0.0036 16.3 1.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF2157 PF09925.9 ORF102452 - 0.0098 15.7 2.8 1.2 8.9 0.1 2.2 1 1 1 2 2 2 2 Predicted membrane protein (DUF2157) DUF4064 PF13273.6 ORF102452 - 0.24 11.7 6.6 0.46 10.8 6.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) DCAF17 PF15802.5 ORF101381 - 0.36 9.5 2.5 0.39 9.4 2.5 1.0 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 17 DUF1336 PF07059.12 ORF101204 - 0.00034 20.8 0.1 0.00043 20.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1336) FliC_SP PF12613.8 ORF100592 - 0.34 11.4 0.9 0.62 10.6 0.9 1.5 1 1 0 1 1 1 0 Flagellin structural protein MPS-4 PF17523.2 ORF1002 - 0.075 13.2 1.0 0.11 12.6 0.1 1.7 1 1 1 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 CAAD PF14159.6 NODE_62830_length_259_cov_0.986607_g54889_i0forward_frame_1 - 0.14 12.0 0.1 0.2 11.5 0.1 1.2 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Mt_ATP-synt_D PF05873.12 NODE_62828_length_259_cov_1.031250_g54887_i0reverse_frame_1 - 0.018 14.9 2.0 0.02 14.7 2.0 1.1 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) Mfa2 PF08842.10 NODE_62824_length_259_cov_1.066964_g54883_i0forward_frame_1 - 0.012 15.2 2.0 0.014 15.0 2.0 1.0 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 Peptidase_C101 PF16218.5 NODE_62824_length_259_cov_1.066964_g54883_i0forward_frame_1 - 0.064 12.5 0.1 0.073 12.3 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C101 PatG_C PF18065.1 NODE_62809_length_259_cov_1.348214_g54868_i0reverse_frame_1 - 0.0038 17.2 0.0 0.006 16.5 0.0 1.3 1 0 0 1 1 1 1 PatG C-terminal TMEM95 PF15203.6 NODE_62808_length_259_cov_1.348214_g54867_i0forward_frame_1 - 0.048 13.3 1.4 0.057 13.1 1.4 1.1 1 0 0 1 1 1 0 TMEM95 family Rad50_zn_hook PF04423.14 NODE_62808_length_259_cov_1.348214_g54867_i0forward_frame_1 - 0.14 12.0 2.5 0.24 11.3 2.5 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif Sre PF03125.18 NODE_62806_length_259_cov_1.352679_g54865_i0forward_frame_1 - 0.02 14.1 6.1 0.022 13.9 6.1 1.0 1 0 0 1 1 1 0 C. elegans Sre G protein-coupled chemoreceptor Metaviral_G PF09595.10 NODE_62796_length_259_cov_1.433036_g54855_i0forward_frame_1 - 0.2 11.7 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Metaviral_G glycoprotein FUN14 PF04930.15 NODE_62787_length_259_cov_1.616071_g54846_i0reverse_frame_1 - 0.054 13.9 0.0 0.071 13.5 0.0 1.1 1 0 0 1 1 1 0 FUN14 family STAG PF08514.11 NODE_62782_length_259_cov_1.687500_g54841_i0reverse_frame_1 - 0.04 13.8 0.3 0.046 13.6 0.3 1.2 1 0 0 1 1 1 0 STAG domain PreAtp-grasp PF18604.1 NODE_62782_length_259_cov_1.687500_g54841_i0forward_frame_1 - 0.11 12.1 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 Pre ATP-grasp domain G-7-MTase PF12803.7 NODE_62778_length_259_cov_1.700893_g54837_i0reverse_frame_1 - 0.014 14.6 0.3 0.014 14.6 0.3 1.1 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) Ion_trans PF00520.31 NODE_62771_length_259_cov_1.785714_g54830_i0reverse_frame_1 - 1.2e-05 24.7 2.5 1.4e-05 24.5 2.5 1.0 1 0 0 1 1 1 1 Ion transport protein WIYLD PF10440.9 NODE_62769_length_259_cov_1.812500_g54828_i0reverse_frame_1 - 0.13 12.1 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-binding WIYLD domain Ofd1_CTDD PF10637.9 NODE_62764_length_259_cov_1.883929_g54823_i0forward_frame_1 - 2.3e-12 46.8 0.0 2.5e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Oxoglutarate and iron-dependent oxygenase degradation C-term Stirrup PF09061.6 NODE_62756_length_259_cov_1.968750_g54815_i0reverse_frame_1 - 0.13 12.5 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Stirrup Phage_holin_2_3 PF16080.5 NODE_62756_length_259_cov_1.968750_g54815_i0forward_frame_1 - 0.074 12.8 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage holin family HP1 RecR PF02132.15 NODE_62752_length_259_cov_2.031250_g54811_i0reverse_frame_1 - 0.011 15.3 0.0 0.025 14.1 0.0 1.7 1 0 0 1 1 1 0 RecR protein TaqI_C PF12950.7 NODE_62745_length_259_cov_2.209821_g54804_i0reverse_frame_1 - 0.011 15.8 0.5 0.012 15.7 0.5 1.1 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain DUF1272 PF06906.11 NODE_62743_length_259_cov_2.214286_g54802_i0forward_frame_1 - 7.7 6.7 13.3 0.7 10.0 4.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) TMEM154 PF15102.6 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 8e-05 22.6 3.1 9.6e-05 22.3 3.1 1.1 1 0 0 1 1 1 1 TMEM154 protein family Glycophorin_A PF01102.18 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.0002 21.5 0.7 0.00023 21.4 0.7 1.0 1 0 0 1 1 1 1 Glycophorin A Podoplanin PF05808.11 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.00066 19.8 6.6 0.00081 19.5 6.6 1.1 1 0 0 1 1 1 1 Podoplanin DUF4711 PF15829.5 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.002 18.1 2.1 0.0022 18.0 2.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4711) MGC-24 PF05283.11 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.005 17.3 6.1 0.0054 17.2 6.1 1.1 1 0 0 1 1 1 1 Multi-glycosylated core protein 24 (MGC-24), sialomucin PIRT PF15099.6 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.042 13.4 1.0 0.053 13.1 1.0 1.3 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family RIFIN PF02009.16 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.045 13.6 0.2 0.055 13.3 0.2 1.1 1 0 0 1 1 1 0 Rifin SSP160 PF06933.11 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.082 11.1 21.4 0.085 11.0 21.4 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Orf78 PF06024.12 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.12 12.7 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Orf78 (ac78) AIF_C PF14721.6 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.13 12.6 0.1 0.23 11.8 0.1 1.5 1 1 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term DUF5383 PF17355.2 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.16 12.3 0.1 0.2 12.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5383) FSA_C PF10479.9 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 2.8 6.0 15.8 2.8 5.9 15.8 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus FMO-like PF00743.19 NODE_62724_length_259_cov_2.803571_g54783_i0reverse_frame_1 - 2.2e-06 26.4 0.0 2.5e-06 26.2 0.0 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like Mqo PF06039.15 NODE_62724_length_259_cov_2.803571_g54783_i0reverse_frame_1 - 0.0017 17.0 0.0 0.0019 16.8 0.0 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) HipA_C PF07804.12 NODE_62724_length_259_cov_2.803571_g54783_i0forward_frame_1 - 0.049 13.3 0.2 0.049 13.3 0.2 1.0 1 0 0 1 1 1 0 HipA-like C-terminal domain DUF5558 PF17713.1 NODE_62720_length_259_cov_3.017857_g54779_i0forward_frame_1 - 0.12 12.8 2.3 1.6 9.1 0.2 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5558) DUF2733 PF10813.8 NODE_62712_length_259_cov_3.991071_g54771_i0forward_frame_1 - 0.13 12.1 0.6 0.24 11.2 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) DUF2433 PF10360.9 NODE_62698_length_259_cov_30.830357_g54757_i0forward_frame_1 - 0.0022 18.1 0.3 0.0025 17.9 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2433) KdpC PF02669.15 NODE_62682_length_259_cov_48.535714_g54741_i0reverse_frame_1 - 0.14 12.0 0.3 0.15 11.9 0.3 1.2 1 0 0 1 1 1 0 K+-transporting ATPase, c chain DUF4834 PF16118.5 NODE_62682_length_259_cov_48.535714_g54741_i0reverse_frame_1 - 4 8.5 6.7 4.6 8.3 6.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Herpes_UL52 PF03121.15 NODE_62677_length_259_cov_55.294643_g54736_i0reverse_frame_1 - 0.0099 15.8 1.0 0.027 14.4 1.0 1.7 1 1 0 1 1 1 1 Herpesviridae UL52/UL70 DNA primase Pombe_5TM PF09437.10 NODE_62673_length_259_cov_58.821429_g54732_i0forward_frame_1 - 0.076 12.6 3.3 0.088 12.4 3.3 1.1 1 0 0 1 1 1 0 Pombe specific 5TM protein ANP PF00212.18 NODE_62672_length_259_cov_59.361607_g54731_i0reverse_frame_1 - 0.57 10.4 0.1 0.57 10.4 0.1 2.7 3 0 0 3 3 3 0 Atrial natriuretic peptide Fanconi_C PF02106.15 NODE_62664_length_259_cov_72.816964_g54723_i0forward_frame_1 - 0.01 14.6 0.2 0.011 14.4 0.2 1.0 1 0 0 1 1 1 0 Fanconi anaemia group C protein CbiC PF02570.15 NODE_62663_length_259_cov_74.116071_g54722_i0reverse_frame_1 - 0.072 12.7 0.0 0.086 12.5 0.0 1.1 1 0 0 1 1 1 0 Precorrin-8X methylmutase DUF2108 PF09881.9 NODE_62661_length_259_cov_75.415179_g54720_i0reverse_frame_1 - 0.002 18.0 0.1 0.0028 17.6 0.1 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2108) RNA_Me_trans PF04252.13 NODE_62651_length_259_cov_133.959821_g54710_i0forward_frame_1 - 0.0079 15.8 0.3 0.012 15.2 0.2 1.3 1 1 0 1 1 1 1 Predicted SAM-dependent RNA methyltransferase DUF2207 PF09972.9 NODE_62648_length_259_cov_156.053571_g54707_i0reverse_frame_1 - 4.1 6.0 4.5 4.4 6.0 4.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) NAR2 PF16974.5 NODE_62646_length_259_cov_161.477679_g54705_i0reverse_frame_1 - 0.05 13.0 0.1 0.066 12.6 0.1 1.2 1 0 0 1 1 1 0 High-affinity nitrate transporter accessory DUF2024 PF09630.10 NODE_62646_length_259_cov_161.477679_g54705_i0reverse_frame_1 - 0.069 13.0 0.4 0.098 12.5 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) AXE1 PF05448.12 NODE_62632_length_259_cov_4210.183036_g54691_i0reverse_frame_1 - 0.14 10.8 0.0 0.16 10.6 0.0 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) PGA2 PF07543.12 NODE_62625_length_260_cov_1.040000_g54684_i0forward_frame_1 - 0.64 10.0 2.0 0.97 9.4 2.0 1.4 1 1 0 1 1 1 0 Protein trafficking PGA2 ABC_membrane PF00664.23 NODE_62622_length_260_cov_1.066667_g54681_i0forward_frame_1 - 0.00012 21.9 0.0 0.00012 21.9 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Hist_deacetyl PF00850.19 NODE_62610_length_260_cov_1.240000_g54669_i0forward_frame_1 - 0.049 13.1 0.1 2.3 7.6 0.0 1.9 1 1 1 2 2 2 0 Histone deacetylase domain Ion_trans PF00520.31 NODE_62606_length_260_cov_1.266667_g54665_i0reverse_frame_1 - 1.3e-07 31.1 9.1 1.3e-07 31.1 9.1 1.0 1 0 0 1 1 1 1 Ion transport protein CLN3 PF02487.17 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 1.6e-07 30.8 1.5 1.6e-07 30.7 1.5 1.0 1 0 0 1 1 1 1 CLN3 protein LapA_dom PF06305.11 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 0.083 12.7 2.6 0.15 11.9 2.6 1.6 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF4131 PF13567.6 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 0.099 12.3 1.4 0.11 12.1 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Halogen_Hydrol PF10112.9 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 0.11 12.5 2.7 0.13 12.2 2.7 1.1 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Saf_2TM PF18303.1 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 0.2 11.2 4.8 0.57 9.8 0.1 2.0 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain DUF2207 PF09972.9 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 1.3 7.7 5.9 1.6 7.4 5.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2163 PF09931.9 NODE_62591_length_260_cov_1.422222_g54650_i0forward_frame_1 - 0.2 11.8 0.6 0.21 11.8 0.0 1.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2163) Peptidase_M18 PF02127.15 NODE_62590_length_260_cov_1.426667_g54649_i0reverse_frame_1 - 0.16 10.7 0.1 0.18 10.5 0.1 1.0 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) Ribosomal_L21p PF00829.21 NODE_62587_length_260_cov_1.466667_g54646_i0reverse_frame_1 - 0.093 13.0 0.3 0.15 12.3 0.1 1.4 1 1 1 2 2 2 0 Ribosomal prokaryotic L21 protein KCH PF16944.5 NODE_62582_length_260_cov_1.515556_g54641_i0reverse_frame_1 - 0.064 13.0 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 Fungal potassium channel Adhesin_P1 PF03257.13 NODE_62570_length_260_cov_1.600000_g54629_i0forward_frame_1 - 0.0085 16.6 0.5 0.011 16.3 0.5 1.1 1 0 0 1 1 1 1 Mycoplasma adhesin P1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks274.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks274.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks274.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks274.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Beta_helix PF13229.6 NODE_62568_length_260_cov_1.653333_g54627_i0reverse_frame_1 - 2.1e-08 34.2 0.6 2.4e-08 34.0 0.6 1.0 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_62568_length_260_cov_1.653333_g54627_i0reverse_frame_1 - 7.2e-07 28.7 0.1 8e-07 28.6 0.1 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Adeno_E1B_55K PF01696.17 NODE_62568_length_260_cov_1.653333_g54627_i0reverse_frame_1 - 0.057 12.1 0.0 0.061 12.0 0.0 1.1 1 0 0 1 1 1 0 Adenovirus EB1 55K protein / large t-antigen DUF1351 PF07083.11 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.0039 17.0 0.7 0.0043 16.8 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1351) HEAT_EZ PF13513.6 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.021 15.4 0.0 0.038 14.5 0.0 1.4 1 0 0 1 1 1 0 HEAT-like repeat Cnd1 PF12717.7 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.024 14.7 0.1 0.025 14.6 0.1 1.1 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.026 14.7 0.0 0.09 13.1 0.0 1.9 2 0 0 2 2 2 0 HEAT repeat Adaptin_N PF01602.20 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.036 12.6 0.0 0.037 12.6 0.0 1.1 1 0 0 1 1 1 0 Adaptin N terminal region HEAT_2 PF13646.6 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.046 14.1 0.0 0.05 14.0 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats RTP1_C1 PF10363.9 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.075 13.2 0.0 0.082 13.1 0.0 1.1 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 Defensin_beta_2 PF13841.6 NODE_62557_length_260_cov_1.857778_g54616_i0reverse_frame_1 - 0.85 10.2 4.5 0.43 11.1 1.3 2.1 2 0 0 2 2 2 0 Beta defensin Herpes_UL32 PF06070.11 NODE_62556_length_260_cov_1.880000_g54615_i0forward_frame_1 - 0.45 8.2 1.1 0.5 8.1 1.1 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 Med21 PF11221.8 NODE_62550_length_260_cov_1.955556_g54609_i0forward_frame_1 - 0.035 14.4 4.6 0.043 14.1 4.6 1.2 1 0 0 1 1 1 0 Subunit 21 of Mediator complex LRR_4 PF12799.7 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 3.2e-08 33.7 1.5 7.1e-07 29.5 0.5 2.3 1 1 1 2 2 2 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 3e-06 26.9 0.2 7.3e-06 25.7 0.2 1.7 1 0 0 1 1 1 1 Leucine rich repeat LRR_9 PF14580.6 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 0.00022 20.8 0.1 0.00026 20.6 0.1 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_6 PF13516.6 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 0.11 12.6 0.8 0.44 10.7 0.1 2.3 3 0 0 3 3 3 0 Leucine Rich repeat LRR_1 PF00560.33 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 0.13 12.9 1.0 4.9 8.1 0.1 2.9 2 1 0 2 2 2 0 Leucine Rich Repeat Molybdopterin_N PF18364.1 NODE_62547_length_260_cov_2.075556_g54606_i0forward_frame_1 - 0.078 13.0 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin oxidoreductase N-terminal domain ABC2_membrane PF01061.24 NODE_62546_length_260_cov_2.106667_g54605_i0forward_frame_1 - 9.5e-07 28.4 0.3 1e-06 28.4 0.3 1.0 1 0 0 1 1 1 1 ABC-2 type transporter MutH PF02976.15 NODE_62542_length_260_cov_2.173333_g54601_i0forward_frame_1 - 0.047 13.7 2.2 0.056 13.5 2.2 1.1 1 0 0 1 1 1 0 DNA mismatch repair enzyme MutH DUF3287 PF11690.8 NODE_62538_length_260_cov_2.253333_g54597_i0forward_frame_1 - 0.036 13.8 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) DIM1 PF02966.16 NODE_62537_length_260_cov_2.262222_g54596_i0reverse_frame_1 - 0.011 15.6 0.0 0.011 15.5 0.0 1.3 1 1 0 1 1 1 0 Mitosis protein DIM1 Telomere_reg-2 PF10193.9 NODE_62532_length_260_cov_2.302222_g54591_i0reverse_frame_1 - 0.057 13.9 0.3 0.069 13.6 0.3 1.1 1 0 0 1 1 1 0 Telomere length regulation protein TcdB_N PF12918.7 NODE_62530_length_260_cov_2.333333_g54589_i0forward_frame_1 - 0.0075 16.5 1.4 0.014 15.7 1.1 1.6 2 0 0 2 2 2 1 TcdB toxin N-terminal helical domain FliJ PF02050.16 NODE_62530_length_260_cov_2.333333_g54589_i0forward_frame_1 - 0.055 13.7 1.3 0.067 13.4 1.3 1.2 1 0 0 1 1 1 0 Flagellar FliJ protein APC_r PF05923.12 NODE_62527_length_260_cov_2.440000_g54586_i0reverse_frame_1 - 0.07 12.9 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 APC repeat Penicil_amidase PF01804.18 NODE_62524_length_260_cov_2.502222_g54583_i0forward_frame_1 - 3.8e-13 49.3 0.0 4.3e-13 49.1 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase Na_H_antiport_1 PF06965.12 NODE_62523_length_260_cov_2.528889_g54582_i0forward_frame_1 - 2.2e-39 135.4 3.0 2.3e-39 135.3 3.0 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 TMEM239 PF15841.5 NODE_62523_length_260_cov_2.528889_g54582_i0forward_frame_1 - 0.054 13.4 0.2 0.075 12.9 0.2 1.4 1 1 0 1 1 1 0 Transmembrane protein 239 family SecD_SecF PF02355.16 NODE_62523_length_260_cov_2.528889_g54582_i0forward_frame_1 - 0.084 12.2 0.2 0.092 12.1 0.2 1.2 1 0 0 1 1 1 0 Protein export membrane protein DUF420 PF04238.12 NODE_62518_length_260_cov_2.662222_g54577_i0forward_frame_1 - 0.0031 17.8 0.6 0.0034 17.7 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF420) PAP2 PF01569.21 NODE_62510_length_260_cov_2.857778_g54569_i0reverse_frame_1 - 7.3e-07 29.0 1.0 7.3e-07 29.0 1.0 1.9 2 0 0 2 2 2 1 PAP2 superfamily Pex24p PF06398.11 NODE_62510_length_260_cov_2.857778_g54569_i0reverse_frame_1 - 0.035 13.1 1.0 0.034 13.1 1.0 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin TPP_enzyme_N PF02776.18 NODE_62509_length_260_cov_2.880000_g54568_i0forward_frame_1 - 1.9e-32 112.2 0.3 2e-32 112.2 0.3 1.0 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Ge1_WD40 PF16529.5 NODE_62506_length_260_cov_2.964444_g54565_i0reverse_frame_1 - 0.0045 16.0 0.0 0.0045 16.0 0.0 1.1 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Cellulose_synt PF03552.14 NODE_62506_length_260_cov_2.964444_g54565_i0forward_frame_1 - 0.13 10.8 0.9 0.12 10.8 0.9 1.1 1 0 0 1 1 1 0 Cellulose synthase DUF3439 PF11921.8 NODE_62497_length_260_cov_3.582222_g54556_i0reverse_frame_1 - 1.7 8.7 11.5 2 8.4 11.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) ARL17 PF15840.5 NODE_62493_length_260_cov_4.320000_g54552_i0forward_frame_1 - 0.0022 18.3 0.2 0.0033 17.8 0.2 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor-like protein 17 Gamma_PGA_hydro PF05908.11 NODE_62493_length_260_cov_4.320000_g54552_i0forward_frame_1 - 0.045 13.2 0.0 0.056 12.8 0.0 1.0 1 0 0 1 1 1 0 Poly-gamma-glutamate hydrolase ALC PF17527.2 NODE_62493_length_260_cov_4.320000_g54552_i0forward_frame_1 - 0.085 12.5 0.5 0.1 12.2 0.5 1.1 1 0 0 1 1 1 0 Phage ALC protein DUF728 PF05304.12 NODE_62489_length_260_cov_33.208889_g54548_i0reverse_frame_1 - 0.012 15.5 4.7 0.015 15.2 4.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF728) Peptidase_C2 PF00648.21 NODE_62486_length_260_cov_37.186667_g54545_i0reverse_frame_1 - 1e-14 54.3 0.0 1.1e-14 54.2 0.0 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Mso1_Sec1_bdg PF14475.6 NODE_62484_length_260_cov_40.791111_g54543_i0forward_frame_1 - 0.12 12.0 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Sec1-binding region of Mso1 RVT_2 PF07727.14 NODE_62481_length_260_cov_45.635556_g54540_i0reverse_frame_1 - 0.038 13.6 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Ten1_2 PF15490.6 NODE_62480_length_260_cov_46.613333_g54539_i0reverse_frame_1 - 9.8e-08 31.7 0.5 1.2e-07 31.4 0.5 1.1 1 0 0 1 1 1 1 Telomere-capping, CST complex subunit Herpes_Helicase PF02689.14 NODE_62480_length_260_cov_46.613333_g54539_i0forward_frame_1 - 0.11 10.5 0.0 0.11 10.5 0.0 1.1 1 0 0 1 1 1 0 Helicase LBP_BPI_CETP PF01273.25 NODE_62480_length_260_cov_46.613333_g54539_i0forward_frame_1 - 0.17 11.5 0.1 0.18 11.4 0.1 1.0 1 0 0 1 1 1 0 LBP / BPI / CETP family, N-terminal domain ZF-HD_dimer PF04770.12 NODE_62477_length_260_cov_48.013333_g54536_i0reverse_frame_1 - 0.064 13.6 2.1 0.064 13.6 2.1 2.6 3 0 0 3 3 3 0 ZF-HD protein dimerisation region DUF321 PF03778.13 NODE_62476_length_260_cov_53.937778_g54535_i0reverse_frame_1 - 0.17 11.5 0.1 0.17 11.5 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF321) LpxC PF03331.13 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_1 - 0.048 13.1 0.0 0.053 13.0 0.0 1.0 1 0 0 1 1 1 0 UDP-3-O-acyl N-acetylglycosamine deacetylase TetR_C_33 PF13305.6 NODE_62465_length_260_cov_65.586667_g54524_i0forward_frame_1 - 0.029 15.1 0.3 0.034 14.9 0.3 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain IIGP PF05049.13 NODE_62462_length_260_cov_69.208889_g54521_i0reverse_frame_1 - 9.6e-05 21.6 0.0 0.00011 21.4 0.0 1.0 1 0 0 1 1 1 1 Interferon-inducible GTPase (IIGP) DotA PF11388.8 NODE_62453_length_260_cov_87.897778_g54512_i0forward_frame_1 - 0.071 13.3 0.1 0.081 13.1 0.1 1.1 1 0 0 1 1 1 0 Phagosome trafficking protein DotA Lustrin_cystein PF14625.6 NODE_62452_length_260_cov_88.115556_g54511_i0forward_frame_1 - 0.052 13.9 6.0 0.081 13.3 6.0 1.3 1 0 0 1 1 1 0 Lustrin, cysteine-rich repeated domain ABC_tran PF00005.27 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 9.4e-16 58.6 0.1 1.1e-15 58.4 0.1 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.00049 20.0 0.1 0.00062 19.7 0.1 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.00061 19.5 0.1 0.00081 19.1 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.00071 19.6 0.0 0.00087 19.4 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.00079 20.0 0.2 0.001 19.6 0.2 1.2 1 0 0 1 1 1 1 AAA domain DUF87 PF01935.17 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.0018 18.4 0.1 0.0024 18.0 0.1 1.1 1 0 0 1 1 1 1 Helicase HerA, central domain SMC_N PF02463.19 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.008 15.6 0.0 0.0095 15.4 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.011 16.2 0.0 0.011 16.2 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.015 15.0 0.3 0.018 14.7 0.3 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_30 PF13604.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.02 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.02 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain NB-ARC PF00931.22 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.031 13.5 0.1 0.032 13.4 0.1 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_15 PF13175.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.041 13.6 0.2 0.041 13.6 0.2 1.1 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.046 13.6 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase AAA_7 PF12775.7 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.062 12.8 0.0 0.078 12.5 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region FtsK_SpoIIIE PF01580.18 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.072 12.4 0.0 0.072 12.4 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family MeaB PF03308.16 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.089 11.8 0.1 0.091 11.7 0.1 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TrwB_AAD_bind PF10412.9 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.098 11.6 0.4 0.12 11.3 0.4 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DUF815 PF05673.13 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.11 11.7 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) IIGP PF05049.13 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.13 11.2 0.1 0.13 11.2 0.1 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) Roc PF08477.13 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.17 12.1 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.18 11.9 0.1 0.24 11.4 0.1 1.1 1 0 0 1 1 1 0 Dynamin family Gtr1_RagA PF04670.12 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.19 11.0 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region GerE PF00196.19 NODE_62434_length_260_cov_190.937778_g54493_i0reverse_frame_1 - 0.024 14.2 1.0 0.044 13.3 0.4 1.7 1 1 1 2 2 2 0 Bacterial regulatory proteins, luxR family LNS2 PF08235.13 NODE_62432_length_260_cov_216.191111_g54491_i0forward_frame_1 - 0.02 14.4 0.5 0.022 14.2 0.5 1.1 1 0 0 1 1 1 0 LNS2 (Lipin/Ned1/Smp2) Yos1 PF08571.10 NODE_62429_length_260_cov_290.133333_g44727_i1forward_frame_1 - 1.8e-16 60.2 0.0 2.2e-16 59.9 0.0 1.1 1 0 0 1 1 1 1 Yos1-like ecTbetaR2 PF08917.10 NODE_62428_length_260_cov_343.244444_g54488_i0reverse_frame_1 - 0.05 13.5 0.9 0.058 13.3 0.9 1.0 1 0 0 1 1 1 0 Transforming growth factor beta receptor 2 ectodomain Hemopexin PF00045.19 NODE_62424_length_260_cov_976.804444_g54484_i0reverse_frame_1 - 0.023 14.7 1.8 2.2 8.3 0.1 2.3 2 0 0 2 2 2 0 Hemopexin Tubulin_C PF03953.17 NODE_62419_length_260_cov_5627.622222_g54479_i0forward_frame_1 - 3.1e-30 104.9 0.0 3.3e-30 104.8 0.0 1.0 1 0 0 1 1 1 1 Tubulin C-terminal domain DUF374 PF04028.13 NODE_62412_length_261_cov_1.207965_g54472_i0reverse_frame_1 - 0.035 13.7 0.0 0.046 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF374) 7TM_transglut PF14402.6 NODE_62410_length_261_cov_1.221239_g54470_i0reverse_frame_1 - 0.027 14.0 3.7 0.029 13.9 3.7 1.0 1 0 0 1 1 1 0 7 transmembrane helices usually fused to an inactive transglutaminase Polyoma_agno PF01736.16 NODE_62405_length_261_cov_1.278761_g54465_i0reverse_frame_1 - 0.18 11.6 0.4 0.29 10.9 0.4 1.4 1 0 0 1 1 1 0 Polyomavirus agnoprotein YhcG_C PF06250.11 NODE_62404_length_261_cov_1.296460_g54464_i0reverse_frame_1 - 0.00035 20.4 0.9 0.00044 20.1 0.9 1.1 1 0 0 1 1 1 1 YhcG PDDEXK nuclease domain LytTR PF04397.15 NODE_62404_length_261_cov_1.296460_g54464_i0reverse_frame_1 - 0.053 13.7 0.2 0.055 13.7 0.2 1.1 1 0 0 1 1 1 0 LytTr DNA-binding domain DUF1921 PF09081.10 NODE_62399_length_261_cov_1.384956_g54459_i0forward_frame_1 - 0.075 13.3 0.2 0.12 12.6 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1921) RepC PF06504.11 NODE_62397_length_261_cov_1.398230_g54457_i0forward_frame_1 - 0.11 11.7 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Replication protein C (RepC) Dynein_IC2 PF11540.8 NODE_62395_length_261_cov_1.464602_g54455_i0reverse_frame_1 - 0.096 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Cytoplasmic dynein 1 intermediate chain 2 Ank_4 PF13637.6 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 3.9e-14 52.8 0.8 2.3e-10 40.8 0.1 1.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 4.1e-12 46.1 0.1 7.8e-07 29.3 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 1.8e-11 44.4 0.1 2.4e-11 44.0 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 1.3e-09 37.4 0.1 0.0033 17.8 0.0 2.6 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 1.7e-08 34.5 0.1 0.00057 20.2 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat PSP1 PF04468.12 NODE_62374_length_261_cov_1.805310_g54434_i0reverse_frame_1 - 0.066 13.5 0.0 0.07 13.4 0.0 1.3 1 1 0 1 1 1 0 PSP1 C-terminal conserved region DUF1129 PF06570.11 NODE_62360_length_261_cov_2.035398_g54420_i0reverse_frame_1 - 0.0079 15.7 0.0 0.0089 15.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) KdpC PF02669.15 NODE_62351_length_261_cov_2.203540_g54411_i0forward_frame_1 - 2.5e-27 95.9 0.0 2.7e-27 95.8 0.0 1.0 1 0 0 1 1 1 1 K+-transporting ATPase, c chain OapA_N PF08525.11 NODE_62349_length_261_cov_2.283186_g54409_i0forward_frame_1 - 0.25 11.3 5.6 0.43 10.6 2.0 2.3 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif Peptidase_S66C PF17676.1 NODE_62342_length_261_cov_2.380531_g54402_i0forward_frame_1 - 6.5e-09 36.4 0.0 7.4e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 LD-carboxypeptidase C-terminal domain Glyco_hydro_42C PF08533.10 NODE_62342_length_261_cov_2.380531_g54402_i0forward_frame_1 - 0.076 12.8 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain GRASP55_65 PF04495.14 NODE_62336_length_261_cov_2.429204_g54396_i0forward_frame_1 - 4.3e-10 40.0 0.0 4.7e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain PDZ_2 PF13180.6 NODE_62336_length_261_cov_2.429204_g54396_i0forward_frame_1 - 0.091 13.1 0.1 0.15 12.4 0.1 1.5 1 1 0 1 1 1 0 PDZ domain Usher PF00577.20 NODE_62333_length_261_cov_2.570796_g54393_i0forward_frame_1 - 3.3e-31 108.8 0.4 3.6e-31 108.7 0.4 1.0 1 0 0 1 1 1 1 Outer membrane usher protein DUF945 PF06097.11 NODE_62330_length_261_cov_2.623894_g54390_i0reverse_frame_1 - 6.8e-18 65.0 1.6 7.8e-18 64.8 1.6 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF945) TAT_signal PF10518.9 NODE_62324_length_261_cov_2.676991_g54384_i0reverse_frame_1 - 0.0035 17.1 0.0 0.0054 16.5 0.0 1.3 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 NODE_62324_length_261_cov_2.676991_g54384_i0reverse_frame_1 - 0.04 13.3 0.0 0.071 12.5 0.0 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Homeodomain PF00046.29 NODE_62324_length_261_cov_2.676991_g54384_i0reverse_frame_1 - 0.12 12.2 0.1 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 Homeodomain Lipocalin_2 PF08212.12 NODE_62322_length_261_cov_2.690265_g54382_i0reverse_frame_1 - 1.1e-06 28.7 0.1 1.4e-06 28.3 0.1 1.2 1 0 0 1 1 1 1 Lipocalin-like domain ADAM_CR_2 PF17771.1 NODE_62322_length_261_cov_2.690265_g54382_i0forward_frame_1 - 0.073 13.6 1.9 0.1 13.1 1.9 1.2 1 0 0 1 1 1 0 ADAM cysteine-rich domain preSET_CXC PF18264.1 NODE_62322_length_261_cov_2.690265_g54382_i0forward_frame_1 - 0.13 12.8 2.6 0.28 11.7 2.6 1.6 1 1 0 1 1 1 0 CXC domain DUF1351 PF07083.11 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.00043 20.1 1.3 0.0099 15.7 1.0 1.9 1 1 1 2 2 2 2 Protein of unknown function (DUF1351) DUF4200 PF13863.6 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.0043 17.4 0.4 0.0055 17.1 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) Coagulase PF08764.10 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.0078 16.4 0.5 0.0085 16.3 0.5 1.1 1 0 0 1 1 1 1 Staphylococcus aureus coagulase KapB PF08810.10 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.02 15.0 0.5 0.043 14.0 0.5 1.5 1 1 1 2 2 2 0 Kinase associated protein B Cauli_AT PF03233.13 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.032 14.1 1.4 0.042 13.8 1.4 1.3 1 1 0 1 1 1 0 Aphid transmission protein RPN7 PF10602.9 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.051 13.3 0.4 0.072 12.8 0.4 1.2 1 0 0 1 1 1 0 26S proteasome subunit RPN7 Filo_VP35 PF02097.15 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.073 12.1 0.0 0.078 12.0 0.0 1.0 1 0 0 1 1 1 0 Filoviridae VP35 ZYG-11_interact PF05884.12 NODE_62316_length_261_cov_2.845133_g54376_i0reverse_frame_1 - 0.00013 21.5 0.0 0.00015 21.3 0.0 1.0 1 0 0 1 1 1 1 Interactor of ZYG-11 GGA_N-GAT PF18308.1 NODE_62316_length_261_cov_2.845133_g54376_i0reverse_frame_1 - 0.0079 15.8 0.2 0.015 14.9 0.2 1.5 1 0 0 1 1 1 1 GGA N-GAT domain DUF2491 PF10679.9 NODE_62315_length_261_cov_2.862832_g54375_i0forward_frame_1 - 1.1e-10 41.1 0.0 1.2e-10 40.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2491) YqbF PF14553.6 NODE_62315_length_261_cov_2.862832_g54375_i0forward_frame_1 - 0.09 12.7 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 YqbF, hypothetical protein domain Spo7_2_N PF15407.6 NODE_62313_length_261_cov_3.115044_g54373_i0forward_frame_1 - 0.16 11.6 0.0 0.35 10.5 0.0 1.5 2 0 0 2 2 2 0 Sporulation protein family 7 DUF4781 PF16013.5 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_1 - 4 6.1 6.7 4.7 5.9 6.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) TMEM171 PF15471.6 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_1 - 4.1 6.3 7.1 4.5 6.2 7.1 1.1 1 0 0 1 1 1 0 Transmembrane protein family 171 CCDC53 PF10152.9 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_1 - 4.9 7.6 7.9 5.8 7.3 7.9 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex FAP PF07174.11 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_1 - 6.3 6.2 25.9 6.7 6.1 25.9 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) AMA-1 PF02430.15 NODE_62306_length_261_cov_3.619469_g54366_i0forward_frame_1 - 0.23 10.4 0.2 0.22 10.4 0.2 1.0 1 0 0 1 1 1 0 Apical membrane antigen 1 MBOAT_2 PF13813.6 NODE_62305_length_261_cov_3.628319_g54365_i0forward_frame_1 - 0.099 12.9 1.1 0.15 12.3 1.1 1.5 1 1 0 1 1 1 0 Membrane bound O-acyl transferase family RVT_2 PF07727.14 NODE_62302_length_261_cov_5.920354_g54362_i0reverse_frame_1 - 0.032 13.9 0.0 0.035 13.8 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Selenoprotein_S PF06936.11 NODE_62302_length_261_cov_5.920354_g54362_i0forward_frame_1 - 0.3 10.9 0.2 0.35 10.7 0.2 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) C12orf66_like PF09404.10 NODE_62301_length_261_cov_11.951327_g54361_i0reverse_frame_1 - 0.22 10.3 0.0 0.26 10.1 0.0 1.0 1 0 0 1 1 1 0 KICSTOR complex C12orf66 like DAG_kinase_N PF14513.6 NODE_62298_length_261_cov_37.256637_g54358_i0reverse_frame_1 - 0.1 12.8 1.3 0.12 12.5 1.3 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus Phage_holin_2_3 PF16080.5 NODE_62298_length_261_cov_37.256637_g54358_i0forward_frame_1 - 0.077 12.8 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage holin family HP1 DUF4714 PF15833.5 NODE_62290_length_261_cov_47.389381_g54350_i0reverse_frame_1 - 0.017 15.1 1.7 0.019 14.9 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) PH_15 PF17339.2 NODE_62288_length_261_cov_48.867257_g54348_i0reverse_frame_1 - 0.1 12.5 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 PH domain AAA_29 PF13555.6 NODE_62287_length_261_cov_51.283186_g54347_i0forward_frame_1 - 0.13 12.0 0.3 0.2 11.4 0.3 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain TT_ORF2 PF02957.15 NODE_62287_length_261_cov_51.283186_g54347_i0forward_frame_1 - 0.21 12.5 1.5 0.28 12.1 1.3 1.3 1 1 0 1 1 1 0 TT viral ORF2 PDR_CDR PF06422.12 NODE_62285_length_261_cov_54.199115_g54345_i0forward_frame_1 - 2.2 8.3 7.2 0.31 11.0 2.5 1.9 1 1 1 2 2 2 0 CDR ABC transporter CNDH2_N PF06278.11 NODE_62284_length_261_cov_54.367257_g54344_i0reverse_frame_1 - 0.051 13.8 0.4 0.061 13.5 0.4 1.3 1 1 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, N-terminal Cas6b_C PF17262.2 NODE_62284_length_261_cov_54.367257_g54344_i0reverse_frame_1 - 0.11 12.7 0.2 0.13 12.4 0.2 1.1 1 0 0 1 1 1 0 Cas6b C-terminal domain Mitochondr_Som1 PF11093.8 NODE_62281_length_261_cov_59.238938_g54341_i0reverse_frame_1 - 0.026 14.5 0.3 0.03 14.3 0.3 1.3 1 0 0 1 1 1 0 Mitochondrial export protein Som1 Spore_YabQ PF09578.10 NODE_62279_length_261_cov_60.977876_g54339_i0forward_frame_1 - 0.087 13.0 2.9 0.13 12.5 2.9 1.2 1 0 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) TFIIB_C_1 PF18542.1 NODE_62269_length_261_cov_91.159292_g54329_i0forward_frame_1 - 0.1 12.6 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 DUF777 PF05606.11 NODE_62266_length_261_cov_107.641593_g54326_i0reverse_frame_1 - 0.062 13.1 3.5 0.063 13.0 1.2 1.8 1 1 1 2 2 2 0 Borrelia burgdorferi protein of unknown function (DUF777) Secapin PF17521.2 NODE_62260_length_261_cov_121.938053_g54320_i0reverse_frame_1 - 0.034 13.9 0.2 0.048 13.5 0.2 1.3 1 0 0 1 1 1 0 Honey bee peptides Raftlin PF15250.6 NODE_62257_length_261_cov_162.867257_g54317_i0forward_frame_1 - 0.066 11.9 0.0 0.072 11.8 0.0 1.0 1 0 0 1 1 1 0 Raftlin CoiA PF06054.11 NODE_62241_length_262_cov_0.973568_g54301_i0forward_frame_3 - 0.0057 15.9 1.0 0.0058 15.8 1.0 1.0 1 0 0 1 1 1 1 Competence protein CoiA-like family Tn7_Tnp_TnsA_N PF08722.11 NODE_62241_length_262_cov_0.973568_g54301_i0forward_frame_3 - 0.0096 16.1 0.3 0.011 15.9 0.3 1.2 1 0 0 1 1 1 1 TnsA endonuclease N terminal TK PF00265.18 NODE_62237_length_262_cov_1.057269_g54297_i0forward_frame_2 - 0.081 12.8 1.8 0.11 12.3 1.8 1.2 1 0 0 1 1 1 0 Thymidine kinase WT1 PF02165.15 NODE_62234_length_262_cov_1.101322_g54294_i0forward_frame_3 - 0.044 13.0 0.8 0.048 12.9 0.8 1.0 1 0 0 1 1 1 0 Wilm's tumour protein zf-CCCH_4 PF18044.1 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 4.4e-05 23.2 4.5 5.9e-05 22.8 4.5 1.2 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 0.00017 21.5 3.2 0.00083 19.3 3.2 1.9 1 1 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 0.0017 18.2 4.0 0.0024 17.7 4.0 1.2 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 0.017 15.5 1.9 0.025 15.0 1.9 1.2 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Torus PF16131.5 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 0.022 15.4 0.1 0.025 15.3 0.1 1.2 1 0 0 1 1 1 0 Torus domain PSA_CBD PF18341.1 NODE_62230_length_262_cov_1.215859_g54290_i0forward_frame_3 - 0.089 12.8 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 PSA endolysin C-terminal cell wall binding domain Arteri_nsp7a PF16749.5 NODE_62229_length_262_cov_1.233480_g54289_i0reverse_frame_2 - 0.054 13.7 0.0 0.065 13.4 0.0 1.1 1 0 0 1 1 1 0 Arterivirus nonstructural protein 7 alpha zf-HYPF PF07503.12 NODE_62221_length_262_cov_1.396476_g54281_i0forward_frame_3 - 0.027 14.3 2.2 0.64 9.8 0.1 2.6 2 1 1 3 3 3 0 HypF finger Mob1_phocein PF03637.17 NODE_62217_length_262_cov_1.409692_g54277_i0reverse_frame_2 - 0.12 12.3 3.4 0.16 12.0 3.4 1.1 1 0 0 1 1 1 0 Mob1/phocein family Dev_Cell_Death PF10539.9 NODE_62215_length_262_cov_1.431718_g54275_i0reverse_frame_3 - 0.017 15.0 0.0 0.019 14.8 0.0 1.1 1 0 0 1 1 1 0 Development and cell death domain Ribosomal_S2 PF00318.20 NODE_62215_length_262_cov_1.431718_g54275_i0reverse_frame_3 - 0.061 12.5 0.0 0.066 12.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S2 Anoct_dimer PF16178.5 NODE_62213_length_262_cov_1.488987_g54273_i0reverse_frame_3 - 0.12 12.0 0.0 0.15 11.8 0.0 1.0 1 0 0 1 1 1 0 Dimerisation domain of Ca+-activated chloride-channel, anoctamin GUN4 PF05419.12 NODE_62212_length_262_cov_1.488987_g54272_i0reverse_frame_2 - 0.12 12.5 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 GUN4-like TSC22 PF01166.18 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.00012 22.3 0.6 0.00019 21.7 0.6 1.3 1 0 0 1 1 1 1 TSC-22/dip/bun family SHE3 PF17078.5 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.00087 19.1 1.3 0.00087 19.1 1.3 1.1 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Tup_N PF08581.10 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.0068 16.7 2.3 0.01 16.1 2.3 1.4 1 1 0 1 1 1 1 Tup N-terminal NRBF2 PF08961.10 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.0083 15.7 1.1 0.0094 15.6 1.1 1.3 1 0 0 1 1 1 1 Nuclear receptor-binding factor 2, autophagy regulator bZIP_1 PF00170.21 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.013 15.5 1.9 0.028 14.5 1.9 1.6 1 1 0 1 1 1 0 bZIP transcription factor ZnuA PF01297.17 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.2 11.0 3.6 0.24 10.8 3.6 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Fructosamin_kin PF03881.14 NODE_62207_length_262_cov_1.546256_g54267_i0forward_frame_3 - 5.3e-25 88.2 0.0 5.6e-25 88.1 0.0 1.0 1 0 0 1 1 1 1 Fructosamine kinase eIF3_p135 PF12807.7 NODE_62206_length_262_cov_1.546256_g54266_i0reverse_frame_3 - 0.11 12.6 0.2 0.12 12.4 0.2 1.0 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit 135 DUF5418 PF17439.2 NODE_62204_length_262_cov_1.577093_g54264_i0forward_frame_3 - 0.0047 17.0 5.6 0.0085 16.2 5.6 1.4 1 1 0 1 1 1 1 Family of unknown function (DUF5418) Pur_ac_phosph_N PF16656.5 NODE_62203_length_262_cov_1.577093_g54263_i0reverse_frame_3 - 0.07 13.7 0.2 0.081 13.5 0.2 1.2 1 0 0 1 1 1 0 Purple acid Phosphatase, N-terminal domain DNA_pol_B_2 PF03175.13 NODE_62195_length_262_cov_1.757709_g54255_i0forward_frame_3 - 0.0087 15.0 0.0 0.0098 14.8 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral Cons_hypoth698 PF03601.14 NODE_62192_length_262_cov_1.792952_g54252_i0reverse_frame_3 - 0.051 12.5 0.0 0.07 12.0 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical protein 698 GAT PF03127.14 NODE_62192_length_262_cov_1.792952_g54252_i0reverse_frame_2 - 0.054 13.8 0.1 0.072 13.4 0.1 1.3 1 0 0 1 1 1 0 GAT domain SFTA2 PF15210.6 NODE_62192_length_262_cov_1.792952_g54252_i0forward_frame_2 - 0.062 13.3 0.1 0.062 13.3 0.1 1.9 1 1 1 2 2 2 0 Surfactant-associated protein 2 FAD_binding_4 PF01565.23 NODE_62188_length_262_cov_1.898678_g54248_i0reverse_frame_2 - 2.9e-14 53.0 0.0 3.2e-14 52.8 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain mTERF PF02536.14 NODE_62187_length_262_cov_1.903084_g54247_i0reverse_frame_3 - 0.1 11.5 0.1 0.12 11.3 0.1 1.0 1 0 0 1 1 1 0 mTERF Pepdidase_M14_N PF18027.1 NODE_62185_length_262_cov_1.916300_g54245_i0reverse_frame_3 - 1.9e-13 50.7 0.3 2e-13 50.6 0.3 1.0 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain DUF4660 PF15559.6 NODE_62185_length_262_cov_1.916300_g54245_i0reverse_frame_3 - 0.1 13.0 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4660) Auto_anti-p27 PF06677.12 NODE_62183_length_262_cov_1.942731_g54243_i0reverse_frame_2 - 3.3e-12 46.3 1.0 4.8e-12 45.8 1.0 1.2 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) AbrB PF05145.12 NODE_62183_length_262_cov_1.942731_g54243_i0forward_frame_2 - 0.11 11.5 0.1 0.12 11.3 0.1 1.0 1 0 0 1 1 1 0 Transition state regulatory protein AbrB QSregVF_b PF12843.7 NODE_62182_length_262_cov_1.991189_g54242_i0forward_frame_2 - 0.025 14.4 0.0 0.036 13.9 0.0 1.3 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor MFS_1 PF07690.16 NODE_62177_length_262_cov_2.088106_g54237_i0forward_frame_2 - 4.8e-07 29.0 1.0 5.7e-07 28.8 1.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PMC2NT PF08066.12 NODE_62175_length_262_cov_2.162996_g54235_i0forward_frame_2 - 0.019 15.6 0.0 0.028 15.1 0.0 1.3 1 0 0 1 1 1 0 PMC2NT (NUC016) domain Mpv17_PMP22 PF04117.12 NODE_62172_length_262_cov_2.220264_g54232_i0reverse_frame_3 - 0.067 13.4 0.4 0.1 12.9 0.4 1.3 1 0 0 1 1 1 0 Mpv17 / PMP22 family Epiglycanin_C PF14654.6 NODE_62171_length_262_cov_2.220264_g54231_i0reverse_frame_3 - 0.031 14.3 0.1 0.044 13.8 0.1 1.3 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region Ly49 PF08391.10 NODE_62171_length_262_cov_2.220264_g54231_i0reverse_frame_2 - 0.09 13.1 2.2 0.11 12.9 2.2 1.2 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region UPF0370 PF13980.6 NODE_62165_length_262_cov_2.370044_g54225_i0reverse_frame_2 - 0.14 12.2 0.4 0.26 11.3 0.4 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0370) DUF1700 PF08006.11 NODE_62165_length_262_cov_2.370044_g54225_i0forward_frame_2 - 0.52 9.8 10.4 0.65 9.5 10.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Pkinase PF00069.25 NODE_62163_length_262_cov_2.458150_g54223_i0forward_frame_3 - 1.6e-19 70.3 1.4 1.7e-19 70.2 1.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_62163_length_262_cov_2.458150_g54223_i0forward_frame_3 - 1.2e-14 54.3 0.4 1.2e-14 54.2 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PsbQ PF05757.11 NODE_62163_length_262_cov_2.458150_g54223_i0forward_frame_3 - 0.08 12.7 0.0 0.097 12.4 0.0 1.2 1 0 0 1 1 1 0 Oxygen evolving enhancer protein 3 (PsbQ) FMO-like PF00743.19 NODE_62162_length_262_cov_2.488987_g54222_i0reverse_frame_2 - 0.00011 20.8 0.0 0.00011 20.8 0.0 1.1 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 NODE_62162_length_262_cov_2.488987_g54222_i0reverse_frame_2 - 0.051 12.8 0.0 0.051 12.8 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF1851 PF08906.11 NODE_62161_length_262_cov_2.533040_g54221_i0reverse_frame_2 - 0.18 11.8 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1851) Phage_integrase PF00589.22 NODE_62150_length_262_cov_2.867841_g54210_i0reverse_frame_2 - 0.05 13.4 0.0 0.051 13.4 0.0 1.1 1 0 0 1 1 1 0 Phage integrase family NAD_binding_2 PF03446.15 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.00037 20.7 0.0 0.00043 20.5 0.0 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.00061 19.4 0.0 0.00079 19.0 0.0 1.1 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.011 15.7 0.1 0.013 15.4 0.1 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.023 14.0 0.0 0.024 14.0 0.0 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.091 12.1 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 ThiF family Acyl_CoA_thio PF02551.15 NODE_62146_length_262_cov_2.977974_g54206_i0reverse_frame_3 - 0.35 10.7 1.6 0.48 10.3 1.6 1.1 1 0 0 1 1 1 0 Acyl-CoA thioesterase phage_tail_N PF08400.10 NODE_62146_length_262_cov_2.977974_g54206_i0forward_frame_2 - 0.096 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Prophage tail fibre N-terminal SecG PF03840.14 NODE_62145_length_262_cov_3.022026_g54205_i0reverse_frame_3 - 0.16 12.0 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Preprotein translocase SecG subunit ABC2_membrane_3 PF12698.7 NODE_62145_length_262_cov_3.022026_g54205_i0forward_frame_3 - 0.0087 15.2 0.0 0.01 14.9 0.0 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein 12TM_1 PF09847.9 NODE_62145_length_262_cov_3.022026_g54205_i0forward_frame_3 - 0.015 14.4 0.2 0.019 14.1 0.2 1.1 1 0 0 1 1 1 0 Membrane protein of 12 TMs ABC2_membrane_2 PF12679.7 NODE_62145_length_262_cov_3.022026_g54205_i0forward_frame_3 - 0.026 13.8 0.1 0.029 13.7 0.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Dmrt1 PF12374.8 NODE_62143_length_262_cov_3.066079_g54203_i0forward_frame_2 - 0.018 15.5 0.1 0.022 15.2 0.1 1.2 1 0 0 1 1 1 0 Double-sex mab3 related transcription factor 1 Mito_fiss_reg PF05308.11 NODE_62142_length_262_cov_3.123348_g54202_i0reverse_frame_2 - 0.025 14.6 1.3 0.025 14.7 1.3 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator DUF364 PF04016.12 NODE_62142_length_262_cov_3.123348_g54202_i0reverse_frame_2 - 0.16 11.6 0.3 0.2 11.2 0.3 1.1 1 0 0 1 1 1 0 Putative heavy-metal chelation PRIMA1 PF16101.5 NODE_62142_length_262_cov_3.123348_g54202_i0reverse_frame_2 - 0.69 10.0 5.9 0.85 9.7 5.9 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_62142_length_262_cov_3.123348_g54202_i0reverse_frame_2 - 4.5 6.7 8.6 5.9 6.3 8.6 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF5559 PF17714.1 NODE_62140_length_262_cov_3.718062_g54200_i0forward_frame_3 - 0.33 10.8 0.7 0.4 10.5 0.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5559) Aldo_ket_red PF00248.21 NODE_62139_length_262_cov_3.841410_g54199_i0reverse_frame_3 - 2.6e-15 56.4 0.0 2.6e-15 56.4 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DsrD PF08679.11 NODE_62139_length_262_cov_3.841410_g54199_i0reverse_frame_3 - 0.055 13.7 0.1 0.095 13.0 0.1 1.6 1 1 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) EPF PF17181.4 NODE_62137_length_262_cov_3.938326_g54197_i0reverse_frame_3 - 0.004 17.1 0.7 0.0052 16.7 0.1 1.5 2 0 0 2 2 2 1 Epidermal patterning factor proteins Xlink PF00193.17 NODE_62137_length_262_cov_3.938326_g54197_i0forward_frame_2 - 0.0037 17.6 0.2 0.0041 17.5 0.2 1.1 1 0 0 1 1 1 1 Extracellular link domain Pyr_redox_dim PF02852.22 NODE_62135_length_262_cov_4.480176_g54195_i0reverse_frame_3 - 0.00017 21.8 0.1 0.00023 21.4 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IFT81_CH PF18383.1 NODE_62134_length_262_cov_6.392070_g54194_i0forward_frame_3 - 0.12 12.7 0.3 0.16 12.2 0.3 1.1 1 0 0 1 1 1 0 Intraflagellar transport 81 calponin homology domain MNSV_P7B PF06692.11 NODE_62134_length_262_cov_6.392070_g54194_i0forward_frame_2 - 1 9.4 0.1 1 9.4 0.1 2.5 2 1 1 3 3 3 0 Melon necrotic spot virus P7B protein DUF1609 PF07753.11 NODE_62127_length_262_cov_35.462555_g54187_i0reverse_frame_2 - 3 7.3 16.1 3.4 7.1 16.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1609) RNA_pol_A_CTD PF03118.15 NODE_62126_length_262_cov_40.255507_g54186_i0reverse_frame_2 - 0.02 14.7 0.2 0.028 14.2 0.2 1.3 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain VirE1 PF12189.8 NODE_62126_length_262_cov_40.255507_g54186_i0reverse_frame_2 - 0.058 13.5 0.1 0.075 13.1 0.1 1.2 1 0 0 1 1 1 0 Single-strand DNA-binding protein DUF2058 PF09831.9 NODE_62123_length_262_cov_43.938326_g54183_i0reverse_frame_2 - 0.0011 19.1 0.2 0.0014 18.8 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2058) RhaT PF06379.12 NODE_62122_length_262_cov_44.414097_g54182_i0reverse_frame_2 - 0.029 13.6 0.2 0.032 13.5 0.2 1.0 1 0 0 1 1 1 0 L-rhamnose-proton symport protein (RhaT) Mrr_cat_2 PF13156.6 NODE_62119_length_262_cov_47.687225_g54179_i0reverse_frame_2 - 0.0087 16.0 3.0 0.011 15.7 3.0 1.1 1 0 0 1 1 1 1 Restriction endonuclease DUF365 PF04033.12 NODE_62119_length_262_cov_47.687225_g54179_i0reverse_frame_2 - 0.02 15.2 1.5 0.025 14.8 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF365) LAS2 PF15792.5 NODE_62119_length_262_cov_47.687225_g54179_i0forward_frame_3 - 0.066 13.7 0.6 0.092 13.3 0.6 1.2 1 0 0 1 1 1 0 Lung adenoma susceptibility protein 2 DUF2076 PF09849.9 NODE_62114_length_262_cov_57.185022_g54174_i0reverse_frame_3 - 0.75 9.8 6.1 0.73 9.8 6.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) zf-BED PF02892.15 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.00085 19.3 0.9 0.0021 18.0 0.9 1.8 1 1 0 1 1 1 1 BED zinc finger zf-C2H2_4 PF13894.6 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.001 19.7 0.1 0.001 19.7 0.1 2.4 3 1 0 3 3 3 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.0014 18.9 0.0 0.01 16.1 0.0 2.3 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_2 PF12756.7 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.0049 17.2 0.5 0.0083 16.4 0.5 1.4 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-met PF12874.7 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.012 16.0 0.0 0.031 14.7 0.0 1.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.012 16.0 1.6 0.023 15.1 0.4 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_12 PF18658.1 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.034 13.7 0.1 0.058 13.0 0.1 1.4 1 0 0 1 1 1 0 Zinc-finger C2H2-type HMG_box PF00505.19 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_3 - 9.1e-07 29.2 0.4 1.4e-06 28.6 0.4 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box Protamine_like PF06382.11 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_3 - 0.00031 20.9 0.1 0.00034 20.8 0.1 1.1 1 0 0 1 1 1 1 Protamine and protamine like DUF1644 PF07800.12 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_3 - 0.13 12.3 0.1 0.18 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) Calpain_inhib PF00748.19 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_3 - 0.16 12.5 5.4 0.18 12.3 5.4 1.1 1 0 0 1 1 1 0 Calpain inhibitor Defensin_1 PF00323.19 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_2 - 2 9.0 7.2 0.78 10.3 0.5 2.3 2 0 0 2 2 2 0 Mammalian defensin DUF1494 PF07379.11 NODE_62110_length_262_cov_63.700441_g54170_i0forward_frame_2 - 0.8 9.5 4.0 0.93 9.3 4.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1494) Malic_M PF03949.15 NODE_62109_length_262_cov_64.449339_g54169_i0forward_frame_2 - 0.025 13.9 0.1 0.028 13.7 0.1 1.0 1 0 0 1 1 1 0 Malic enzyme, NAD binding domain AreA_N PF07573.11 NODE_62107_length_262_cov_72.083700_g54167_i0forward_frame_3 - 0.036 14.7 0.1 0.055 14.1 0.1 1.2 1 0 0 1 1 1 0 Nitrogen regulatory protein AreA N terminus Rhodanese PF00581.20 NODE_62104_length_262_cov_78.599119_g54164_i0reverse_frame_2 - 0.011 16.3 0.0 0.013 16.0 0.0 1.1 1 0 0 1 1 1 0 Rhodanese-like domain DUF3715 PF12509.8 NODE_62102_length_262_cov_86.700441_g54162_i0forward_frame_3 - 0.044 13.8 0.1 0.051 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3715) eIF-3_zeta PF05091.12 NODE_62100_length_262_cov_93.511013_g54160_i0reverse_frame_2 - 2.9e-08 33.2 0.0 3.4e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) PgaPase_1 PF06162.12 NODE_62100_length_262_cov_93.511013_g54160_i0reverse_frame_2 - 0.026 14.3 0.0 0.032 14.0 0.0 1.1 1 0 0 1 1 1 0 Putative pyroglutamyl peptidase PgaPase_1 PAD PF03068.15 NODE_62100_length_262_cov_93.511013_g54160_i0reverse_frame_2 - 0.11 11.5 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks275.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks275.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks275.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks275.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:02:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ras PF00071.22 NODE_62098_length_262_cov_98.162996_g54158_i0forward_frame_2 - 3.6e-06 26.7 0.0 4.3e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_62098_length_262_cov_98.162996_g54158_i0forward_frame_2 - 0.064 13.5 0.0 0.086 13.1 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase zf-RING_7 PF02591.15 NODE_62094_length_262_cov_108.810573_g54154_i0forward_frame_3 - 0.37 11.0 0.0 0.37 11.0 0.0 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain DER1 PF04511.15 NODE_62085_length_262_cov_142.577093_g54145_i0forward_frame_2 - 0.0042 17.0 3.9 0.0046 16.9 3.9 1.0 1 0 0 1 1 1 1 Der1-like family MNSV_P7B PF06692.11 NODE_62084_length_262_cov_143.621145_g54144_i0reverse_frame_2 - 1.8 8.6 6.3 0.31 11.1 2.3 1.7 2 0 0 2 2 2 0 Melon necrotic spot virus P7B protein zinc_ribbon_16 PF17034.5 NODE_62082_length_262_cov_152.083700_g54142_i0reverse_frame_3 - 5.1e-14 52.6 2.9 5.8e-14 52.4 2.9 1.1 1 0 0 1 1 1 1 Zinc-ribbon like family Zn_ribbon_17 PF17120.5 NODE_62082_length_262_cov_152.083700_g54142_i0reverse_frame_3 - 2.8e-06 26.9 5.6 3.4e-06 26.6 5.6 1.1 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 NODE_62082_length_262_cov_152.083700_g54142_i0reverse_frame_3 - 0.0044 17.3 3.0 0.0058 16.9 3.0 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_62082_length_262_cov_152.083700_g54142_i0reverse_frame_3 - 0.085 13.2 4.5 0.15 12.5 4.5 1.4 1 0 0 1 1 1 0 Ring finger domain DHHC PF01529.20 NODE_62076_length_262_cov_288.713656_g54136_i0reverse_frame_3 - 0.091 12.9 1.9 0.12 12.5 1.9 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Telomere_Sde2_2 PF13297.6 NODE_62072_length_262_cov_577.872247_g54132_i0reverse_frame_3 - 3.3e-05 23.5 0.0 4.8e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Telomere stability C-terminal OAD_gamma PF04277.13 NODE_62067_length_262_cov_51393.823789_g54127_i0forward_frame_2 - 0.18 12.4 1.7 0.33 11.6 1.7 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain PTN_MK_N PF05196.13 NODE_62064_length_263_cov_1.039474_g54124_i0reverse_frame_3 - 0.064 13.5 0.1 0.096 12.9 0.1 1.3 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, N-terminal domain Auxin_BP PF02041.16 NODE_62061_length_263_cov_1.074561_g54121_i0reverse_frame_2 - 0.11 12.1 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Auxin binding protein EF-hand_11 PF08976.11 NODE_62061_length_263_cov_1.074561_g54121_i0forward_frame_2 - 0.19 12.6 0.0 0.24 12.3 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain DUF839 PF05787.13 NODE_62060_length_263_cov_1.109649_g54120_i0reverse_frame_2 - 0.18 11.0 0.0 0.18 11.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF839) DUF4125 PF13526.6 NODE_62058_length_263_cov_1.149123_g54118_i0forward_frame_3 - 0.13 11.9 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4125) Sigma_M_inh PF17453.2 NODE_62057_length_263_cov_1.166667_g54117_i0reverse_frame_2 - 0.033 14.6 0.3 0.042 14.3 0.3 1.1 1 0 0 1 1 1 0 Sigma-M inhibitor P-mevalo_kinase PF04275.14 NODE_62057_length_263_cov_1.166667_g54117_i0forward_frame_3 - 0.095 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Phosphomevalonate kinase B9-C2 PF07162.11 NODE_62045_length_263_cov_1.307018_g54105_i0reverse_frame_3 - 7.5e-06 26.2 0.0 8.5e-06 26.1 0.0 1.0 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein MCPVI PF02993.14 NODE_62044_length_263_cov_1.324561_g54104_i0reverse_frame_3 - 1.4 8.7 5.7 1.6 8.5 5.7 1.0 1 0 0 1 1 1 0 Minor capsid protein VI CSN4_RPN5_eIF3a PF18420.1 NODE_62041_length_263_cov_1.364035_g54101_i0forward_frame_2 - 2.8 8.2 6.8 4.6 7.5 0.2 3.1 3 0 0 3 3 3 0 CSN4/RPN5/eIF3a helix turn helix domain Viral_Rep PF02407.16 NODE_62039_length_263_cov_1.385965_g54099_i0reverse_frame_2 - 0.028 14.6 0.1 0.038 14.2 0.1 1.2 1 0 0 1 1 1 0 Putative viral replication protein DUF5060 PF16586.5 NODE_62039_length_263_cov_1.385965_g54099_i0reverse_frame_2 - 0.042 14.2 0.1 0.055 13.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5060) Seadorna_VP7 PF07387.11 NODE_62032_length_263_cov_1.442982_g54092_i0forward_frame_3 - 0.053 12.6 0.1 0.059 12.4 0.1 1.0 1 0 0 1 1 1 0 Seadornavirus VP7 Shisa PF13908.6 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.00049 20.4 0.1 0.00052 20.3 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Cadherin_C_2 PF16492.5 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.0041 17.9 0.1 0.0048 17.6 0.1 1.2 1 0 0 1 1 1 1 Cadherin cytoplasmic C-terminal TMEM154 PF15102.6 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.066 13.1 0.1 0.077 12.9 0.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family LRR19-TM PF15176.6 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.066 13.2 1.1 0.086 12.8 0.9 1.3 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain FAM176 PF14851.6 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.067 12.9 0.1 0.07 12.8 0.1 1.1 1 0 0 1 1 1 0 FAM176 family Adeno_terminal PF02459.15 NODE_62023_length_263_cov_1.596491_g54083_i0reverse_frame_3 - 0.097 11.0 0.2 0.1 10.9 0.2 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein Rubredoxin_2 PF18073.1 NODE_62015_length_263_cov_1.697368_g54075_i0forward_frame_2 - 0.064 13.0 4.2 0.064 13.0 4.2 2.5 2 2 0 2 2 2 0 Rubredoxin metal binding domain BBS2_C PF14782.6 NODE_62013_length_263_cov_1.754386_g54073_i0reverse_frame_2 - 0.25 10.1 2.3 0.26 10.0 2.3 1.0 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, C-terminal DUF4918 PF16265.5 NODE_62010_length_263_cov_1.780702_g54070_i0forward_frame_3 - 0.014 15.0 1.1 0.016 14.8 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) zf_Hakai PF18408.1 NODE_62009_length_263_cov_1.798246_g54069_i0forward_frame_2 - 5.7 6.7 7.8 0.53 10.0 2.0 2.2 2 1 0 2 2 2 0 C2H2 Hakai zinc finger domain TniQ PF06527.11 NODE_62007_length_263_cov_1.899123_g54067_i0reverse_frame_3 - 0.039 14.7 0.9 0.046 14.4 0.9 1.1 1 0 0 1 1 1 0 TniQ Cor1 PF04803.12 NODE_62003_length_263_cov_1.969298_g54063_i0reverse_frame_2 - 0.00021 21.5 3.9 0.00026 21.2 3.9 1.0 1 0 0 1 1 1 1 Cor1/Xlr/Xmr conserved region YkyA PF10368.9 NODE_62003_length_263_cov_1.969298_g54063_i0reverse_frame_2 - 0.0068 16.1 3.2 0.0078 15.9 3.2 1.0 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein LIN52 PF10044.9 NODE_62003_length_263_cov_1.969298_g54063_i0reverse_frame_2 - 0.15 12.8 3.2 0.35 11.6 3.0 1.7 1 1 0 1 1 1 0 Retinal tissue protein bZIP_1 PF00170.21 NODE_62003_length_263_cov_1.969298_g54063_i0reverse_frame_2 - 1.5 9.0 8.4 1.3 9.2 2.5 2.3 2 1 0 2 2 2 0 bZIP transcription factor DUF4509 PF14970.6 NODE_62002_length_263_cov_2.000000_g54062_i0reverse_frame_3 - 0.062 13.2 0.1 0.064 13.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4509) DUF4834 PF16118.5 NODE_61998_length_263_cov_2.109649_g54058_i0reverse_frame_2 - 0.09 13.8 2.0 0.12 13.4 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF1980 PF09323.10 NODE_61998_length_263_cov_2.109649_g54058_i0reverse_frame_2 - 0.84 9.5 3.3 0.97 9.3 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) HTH_45 PF14947.6 NODE_61991_length_263_cov_2.276316_g54051_i0forward_frame_2 - 0.1 12.6 0.4 0.15 12.1 0.4 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix CODH_A_N PF18537.1 NODE_61986_length_263_cov_2.543860_g54046_i0forward_frame_2 - 0.0072 16.3 0.0 0.0099 15.9 0.0 1.1 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Folate_rec PF03024.14 NODE_61984_length_263_cov_2.583333_g54044_i0forward_frame_3 - 2e-06 27.8 1.1 2.3e-06 27.6 1.1 1.0 1 0 0 1 1 1 1 Folate receptor family DUF1127 PF06568.11 NODE_61984_length_263_cov_2.583333_g54044_i0forward_frame_2 - 4 7.2 6.4 5.7 6.7 6.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1127) Radial_spoke PF04712.12 NODE_61982_length_263_cov_2.609649_g54042_i0forward_frame_3 - 0.00036 19.6 0.2 0.00038 19.6 0.2 1.0 1 0 0 1 1 1 1 Radial spokehead-like protein PhdYeFM_antitox PF02604.19 NODE_61981_length_263_cov_2.618421_g54041_i0reverse_frame_2 - 0.029 14.2 0.1 0.089 12.6 0.0 1.8 2 0 0 2 2 2 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Fer4_7 PF12838.7 NODE_61979_length_263_cov_2.807018_g54039_i0reverse_frame_3 - 0.023 15.3 0.7 0.023 15.3 0.7 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_61979_length_263_cov_2.807018_g54039_i0reverse_frame_3 - 2.4 8.4 8.2 0.3 11.3 1.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Botulinum_HA-17 PF05588.11 NODE_61978_length_263_cov_2.850877_g54038_i0reverse_frame_2 - 0.011 15.9 0.1 0.012 15.8 0.1 1.2 1 0 0 1 1 1 0 Clostridium botulinum HA-17 domain aGPT-Pplase3 PF18746.1 NODE_61975_length_263_cov_2.942982_g54035_i0forward_frame_3 - 0.1 11.9 0.1 0.1 11.9 0.1 1.0 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 DUF2654 PF10849.8 NODE_61973_length_263_cov_3.048246_g54033_i0reverse_frame_3 - 0.017 15.3 0.0 0.028 14.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2654) Corona_NS2 PF04753.12 NODE_61971_length_263_cov_3.219298_g54031_i0reverse_frame_3 - 0.055 14.1 0.1 0.069 13.7 0.1 1.3 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 FCSD-flav_bind PF09242.11 NODE_61968_length_263_cov_3.543860_g54028_i0reverse_frame_3 - 6.7 7.1 8.5 0.63 10.4 1.1 2.2 2 0 0 2 2 2 0 Flavocytochrome c sulphide dehydrogenase, flavin-binding Nop16 PF09420.10 NODE_61968_length_263_cov_3.543860_g54028_i0forward_frame_3 - 0.058 13.4 0.3 0.071 13.1 0.3 1.1 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 Ribosomal_L27e PF01777.18 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_2 - 0.0093 16.3 0.2 0.011 16.1 0.2 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family STAG PF08514.11 NODE_61960_length_263_cov_4.403509_g54020_i0forward_frame_2 - 0.0083 16.0 1.1 0.0084 16.0 1.1 1.1 1 0 0 1 1 1 1 STAG domain Complex1_49kDa PF00346.19 NODE_61959_length_263_cov_4.881579_g54019_i0forward_frame_3 - 3.6e-09 36.1 0.0 4.8e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DUF5595 PF18077.1 NODE_61954_length_263_cov_25.232456_g54014_i0reverse_frame_2 - 5.6 7.1 8.0 2.2 8.4 0.1 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF5595) Ion_trans PF00520.31 NODE_61951_length_263_cov_30.592105_g54011_i0forward_frame_2 - 0.0091 15.3 0.5 0.0093 15.2 0.5 1.1 1 0 0 1 1 1 1 Ion transport protein Herpes_UL73 PF03554.13 NODE_61950_length_263_cov_41.399123_g54010_i0reverse_frame_2 - 0.015 15.3 7.2 0.024 14.7 7.2 1.4 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein Pex24p PF06398.11 NODE_61950_length_263_cov_41.399123_g54010_i0reverse_frame_2 - 0.25 10.3 5.1 0.27 10.2 5.1 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin NADH_B2 PF14813.6 NODE_61947_length_263_cov_48.811404_g54007_i0reverse_frame_3 - 0.068 13.0 0.3 0.22 11.4 0.1 1.8 2 0 0 2 2 2 0 NADH dehydrogenase 1 beta subcomplex subunit 2 IMPDH PF00478.25 NODE_61947_length_263_cov_48.811404_g54007_i0reverse_frame_3 - 0.2 10.6 0.0 0.2 10.6 0.0 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain DUF4834 PF16118.5 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.016 16.1 0.4 0.02 15.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF1517 PF07466.11 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.027 14.6 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1517) RXLR PF16810.5 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.029 14.8 0.1 0.033 14.6 0.1 1.1 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity Wzy_C PF04932.15 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.031 13.9 0.1 0.035 13.7 0.1 1.1 1 0 0 1 1 1 0 O-Antigen ligase Peptidase_S49_N PF08496.10 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.076 13.1 1.5 0.095 12.8 1.5 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal FlaG PF03646.15 NODE_61939_length_263_cov_59.491228_g53999_i0reverse_frame_3 - 0.048 13.8 3.2 0.057 13.6 3.2 1.1 1 0 0 1 1 1 0 FlaG protein VPDSG-CTERM PF18205.1 NODE_61929_length_263_cov_74.482456_g53989_i0forward_frame_3 - 2.4 8.1 0.1 2.4 8.1 0.1 2.8 3 0 0 3 3 3 0 VPDSG-CTERM motif DUF4849 PF16141.5 NODE_61927_length_263_cov_76.736842_g53987_i0forward_frame_2 - 0.02 14.2 0.4 0.024 13.9 0.4 1.1 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 DNA_pol_lambd_f PF10391.9 NODE_61927_length_263_cov_76.736842_g53987_i0forward_frame_2 - 0.079 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda CbiG_mid PF11761.8 NODE_61927_length_263_cov_76.736842_g53987_i0forward_frame_2 - 0.089 12.9 0.0 0.25 11.5 0.0 1.7 1 1 0 1 1 1 0 Cobalamin biosynthesis central region Ank_2 PF12796.7 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 1e-07 32.5 0.0 1.2e-07 32.2 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 0.0001 22.5 0.0 0.3 11.4 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 0.00049 20.4 0.1 1.1 9.9 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 0.0054 17.3 0.0 0.0071 16.9 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 0.0055 17.1 0.0 2.8 8.8 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat PsbH PF00737.20 NODE_61915_length_263_cov_164.320175_g53975_i0forward_frame_2 - 4 7.3 5.9 1.3 8.8 0.6 2.2 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein Ank_2 PF12796.7 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 1e-12 48.4 0.0 1.2e-12 48.3 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 4.1e-11 43.2 0.0 5.1e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 2.9e-08 33.3 0.0 0.0002 21.5 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 4.5e-08 33.2 0.0 0.0012 19.2 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 5.5e-08 32.9 0.0 0.00018 21.7 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) DUF1830 PF08865.11 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 0.099 12.7 0.0 0.21 11.6 0.0 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF1830) YlzJ PF14035.6 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 0.22 11.7 0.0 9.6 6.5 0.0 2.1 1 1 1 2 2 2 0 YlzJ-like protein HHH_6 PF14579.6 NODE_61912_length_263_cov_175.333333_g53972_i0reverse_frame_2 - 0.072 13.4 0.2 8.8 6.7 0.0 2.1 1 1 1 2 2 2 0 Helix-hairpin-helix motif ADD_ATRX PF17981.1 NODE_61911_length_263_cov_221.820175_g53971_i0reverse_frame_2 - 0.72 9.8 7.8 1.3 9.0 2.1 2.2 2 0 0 2 2 2 0 Cysteine Rich ADD domain zf-ANAPC11 PF12861.7 NODE_61911_length_263_cov_221.820175_g53971_i0forward_frame_3 - 0.0052 16.8 0.4 0.006 16.6 0.4 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Neurokinin_B PF03823.14 NODE_61911_length_263_cov_221.820175_g53971_i0forward_frame_3 - 0.026 14.6 0.4 0.049 13.7 0.1 1.6 1 1 1 2 2 2 0 Neurokinin B DNA_pol_phi PF04931.13 NODE_61907_length_263_cov_582.447368_g53967_i0reverse_frame_3 - 5.8 4.9 12.6 6.1 4.8 12.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi SR-25 PF10500.9 NODE_61905_length_263_cov_868.978070_g53965_i0reverse_frame_3 - 0.024 14.2 9.1 0.027 14.1 9.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3772 PF12607.8 NODE_61904_length_263_cov_1151.280702_g53964_i0forward_frame_3 - 1.2 8.9 3.3 1.9 8.3 3.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) Phage_tail_L PF05100.12 NODE_61903_length_263_cov_2621.175439_g53963_i0forward_frame_3 - 0.2 10.9 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Phage minor tail protein L DUF4962 PF16332.5 NODE_61901_length_264_cov_0.930131_g53961_i0forward_frame_3 - 0.048 12.2 0.1 0.054 12.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4962) DUF5582 PF17819.1 NODE_61896_length_264_cov_1.043668_g53956_i0forward_frame_3 - 2.6e-05 24.7 0.0 3e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5582) GYD PF08734.11 NODE_61888_length_264_cov_1.209607_g53948_i0reverse_frame_2 - 0.17 11.8 0.0 19 5.3 0.0 2.1 2 0 0 2 2 2 0 GYD domain DUF3341 PF11821.8 NODE_61887_length_264_cov_1.218341_g53947_i0forward_frame_3 - 0.12 12.0 1.1 0.15 11.7 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) VPS11_C PF12451.8 NODE_61886_length_264_cov_1.222707_g53946_i0reverse_frame_3 - 0.27 11.5 2.2 0.33 11.2 0.2 2.1 2 1 0 2 2 2 0 Vacuolar protein sorting protein 11 C terminal DUF4965 PF16335.5 NODE_61883_length_264_cov_1.240175_g53943_i0forward_frame_2 - 0.0097 15.6 0.0 0.014 15.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4965) P22_AR_C PF10548.9 NODE_61882_length_264_cov_1.244541_g53942_i0reverse_frame_2 - 0.029 14.5 0.1 0.63 10.2 0.0 2.0 2 0 0 2 2 2 0 P22AR C-terminal domain Dynein_heavy PF03028.15 NODE_61882_length_264_cov_1.244541_g53942_i0reverse_frame_2 - 0.037 14.1 0.0 0.044 13.9 0.0 1.2 1 0 0 1 1 1 0 Dynein heavy chain region D6 P-loop domain Cytochrome_B PF00033.19 NODE_61877_length_264_cov_1.314410_g53937_i0reverse_frame_2 - 0.031 14.1 0.4 0.034 14.0 0.4 1.1 1 0 0 1 1 1 0 Cytochrome b/b6/petB Toxin_35 PF10530.9 NODE_61876_length_264_cov_1.340611_g53936_i0forward_frame_3 - 0.0075 16.2 1.1 0.0075 16.2 1.1 1.8 1 1 1 2 2 2 1 Toxin with inhibitor cystine knot ICK or Knottin scaffold Gyro_capsid PF04162.12 NODE_61874_length_264_cov_1.371179_g53934_i0forward_frame_2 - 0.41 9.1 3.2 0.49 8.8 3.2 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) Cation_ATPase PF13246.6 NODE_61870_length_264_cov_1.401747_g53930_i0forward_frame_2 - 7.1e-16 58.1 0.0 8.1e-16 57.9 0.0 1.1 1 0 0 1 1 1 1 Cation transport ATPase (P-type) PTP_tm PF18861.1 NODE_61866_length_264_cov_1.502183_g53926_i0reverse_frame_2 - 0.0023 17.9 0.1 0.0025 17.8 0.1 1.0 1 0 0 1 1 1 1 Transmembrane domain of protein tyrosine phosphatase, receptor type J Hepatitis_core PF00906.20 NODE_61863_length_264_cov_1.567686_g53923_i0forward_frame_2 - 0.0022 17.6 0.1 0.0025 17.4 0.1 1.0 1 0 0 1 1 1 1 Hepatitis core antigen CBM_14 PF01607.24 NODE_61862_length_264_cov_1.572052_g53922_i0reverse_frame_3 - 0.0065 16.6 6.2 2.9 8.1 0.1 3.1 2 1 0 2 2 2 2 Chitin binding Peritrophin-A domain Lustrin_cystein PF14625.6 NODE_61862_length_264_cov_1.572052_g53922_i0reverse_frame_3 - 0.034 14.5 21.2 4.7 7.7 3.5 4.5 1 1 2 3 3 3 0 Lustrin, cysteine-rich repeated domain Dickkopf_N PF04706.12 NODE_61862_length_264_cov_1.572052_g53922_i0reverse_frame_3 - 0.073 13.6 8.2 9.6 6.8 0.6 3.6 2 1 1 3 3 3 0 Dickkopf N-terminal cysteine-rich region RteC PF09357.10 NODE_61861_length_264_cov_1.576419_g53921_i0reverse_frame_3 - 0.0011 18.7 0.2 0.0013 18.5 0.2 1.1 1 0 0 1 1 1 1 RteC protein PAS_8 PF13188.7 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 3.1e-08 33.4 0.0 3.7e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 7.1e-07 29.2 0.0 9.4e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 0.00012 22.3 0.0 0.00014 22.1 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 0.00022 21.4 0.0 0.00025 21.3 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_7 PF12860.7 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 0.004 17.3 0.0 0.0049 17.0 0.0 1.3 1 1 0 1 1 1 1 PAS fold MLTR_LBD PF17765.1 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 0.029 14.5 0.0 0.03 14.5 0.0 1.2 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain MKT1_C PF12246.8 NODE_61850_length_264_cov_1.707424_g53910_i0forward_frame_2 - 0.018 14.3 0.0 0.019 14.2 0.0 1.1 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication Lipoprotein_Ltp PF07553.11 NODE_61848_length_264_cov_1.737991_g53908_i0reverse_frame_2 - 0.12 12.7 1.2 0.21 11.9 1.2 1.3 1 0 0 1 1 1 0 Host cell surface-exposed lipoprotein DUF2982 PF11201.8 NODE_61847_length_264_cov_1.746725_g53907_i0forward_frame_2 - 0.093 12.3 1.9 0.11 12.1 1.2 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2982) LRR_4 PF12799.7 NODE_61841_length_264_cov_1.807860_g53901_i0forward_frame_3 - 0.064 13.7 0.1 0.31 11.5 0.1 2.1 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 NODE_61841_length_264_cov_1.807860_g53901_i0forward_frame_2 - 2.7e-05 23.8 0.7 3.3e-05 23.5 0.7 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 NODE_61841_length_264_cov_1.807860_g53901_i0forward_frame_2 - 0.00016 21.3 1.9 0.00021 21.0 1.9 1.1 1 0 0 1 1 1 1 Leucine rich repeat LRR_4 PF12799.7 NODE_61841_length_264_cov_1.807860_g53901_i0forward_frame_2 - 0.00041 20.7 3.0 0.00062 20.1 3.0 1.2 1 0 0 1 1 1 1 Leucine Rich repeats (2 copies) DUF3122 PF11320.8 NODE_61833_length_264_cov_1.912664_g53893_i0forward_frame_3 - 0.063 13.4 0.0 0.075 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3122) SUIM_assoc PF16619.5 NODE_61831_length_264_cov_1.965066_g53891_i0reverse_frame_3 - 0.16 12.1 3.3 2.6 8.2 1.1 2.1 2 0 0 2 2 2 0 Unstructured region C-term to UIM in Ataxin3 PolyG_pol PF01518.16 NODE_61831_length_264_cov_1.965066_g53891_i0reverse_frame_2 - 0.099 11.3 0.2 0.11 11.1 0.2 1.0 1 0 0 1 1 1 0 Sigma NS protein DUF5314 PF17241.2 NODE_61825_length_264_cov_2.052402_g53885_i0reverse_frame_3 - 0.0073 16.0 4.1 0.0096 15.6 4.1 1.3 1 1 0 1 1 1 1 Family of unknown function (DUF5314) TAL_FSA PF00923.19 NODE_61825_length_264_cov_2.052402_g53885_i0reverse_frame_2 - 1.7e-07 30.9 0.0 1.7e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase EF_assoc_2 PF08356.12 NODE_61824_length_264_cov_2.061135_g53884_i0reverse_frame_3 - 0.026 14.5 0.0 0.04 13.9 0.0 1.3 1 1 0 1 1 1 0 EF hand associated PqiA PF04403.13 NODE_61822_length_264_cov_2.104803_g53882_i0forward_frame_3 - 0.027 14.3 0.1 0.028 14.2 0.1 1.0 1 0 0 1 1 1 0 Paraquat-inducible protein A Kazal_2 PF07648.15 NODE_61820_length_264_cov_2.174672_g53880_i0forward_frame_3 - 0.03 14.5 0.4 0.03 14.5 0.4 1.5 2 0 0 2 2 2 0 Kazal-type serine protease inhibitor domain AlaDh_PNT_C PF01262.21 NODE_61820_length_264_cov_2.174672_g53880_i0forward_frame_2 - 2.7e-08 33.4 0.0 3.2e-08 33.1 0.0 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain KSHV_K8 PF07188.11 NODE_61820_length_264_cov_2.174672_g53880_i0forward_frame_2 - 0.041 13.3 0.0 0.041 13.3 0.0 1.1 1 0 0 1 1 1 0 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein ANAPC4_WD40 PF12894.7 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_3 - 1.8e-06 28.2 0.0 4e-06 27.0 0.0 1.5 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_3 - 0.0011 19.8 0.0 0.046 14.6 0.0 2.2 2 0 0 2 2 2 1 WD domain, G-beta repeat DUF1964 PF09244.10 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_3 - 0.14 12.6 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1964) Nucleoporin_N PF08801.11 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_3 - 0.15 10.8 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 Nup133 N terminal like SSP160 PF06933.11 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_3 - 0.024 12.8 3.3 0.026 12.8 3.3 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Sporozoite_P67 PF05642.11 NODE_61810_length_264_cov_2.393013_g53870_i0forward_frame_2 - 0.075 11.1 5.9 0.091 10.8 5.9 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Mucin PF01456.17 NODE_61810_length_264_cov_2.393013_g53870_i0forward_frame_2 - 3.9 7.4 24.9 6.5 6.7 24.9 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF3439 PF11921.8 NODE_61810_length_264_cov_2.393013_g53870_i0forward_frame_2 - 4.3 7.3 21.6 7.3 6.6 21.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Peptidase_C54 PF03416.19 NODE_61809_length_264_cov_2.436681_g53869_i0forward_frame_2 - 0.12 11.8 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase family C54 Siva PF05458.12 NODE_61806_length_264_cov_2.445415_g53866_i0reverse_frame_2 - 0.015 15.0 2.3 0.017 14.8 2.3 1.0 1 0 0 1 1 1 0 Cd27 binding protein (Siva) Cobl PF09469.10 NODE_61805_length_264_cov_2.458515_g53865_i0reverse_frame_3 - 0.057 13.7 0.0 0.058 13.7 0.0 1.1 1 0 0 1 1 1 0 Cordon-bleu ubiquitin-like domain HTH_38 PF13936.6 NODE_61803_length_264_cov_2.475983_g53863_i0reverse_frame_3 - 0.0063 16.2 0.1 0.0094 15.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain PRD PF00874.20 NODE_61800_length_264_cov_2.541485_g53860_i0forward_frame_2 - 7.8e-09 35.7 0.0 8.9e-09 35.5 0.0 1.0 1 0 0 1 1 1 1 PRD domain COPI_C PF06957.11 NODE_61799_length_264_cov_2.541485_g53859_i0reverse_frame_3 - 3.5e-15 55.7 0.6 3.9e-15 55.5 0.6 1.0 1 0 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus zf-CW PF07496.15 NODE_61794_length_264_cov_2.655022_g53854_i0forward_frame_3 - 0.085 12.9 0.2 0.14 12.2 0.2 1.3 1 0 0 1 1 1 0 CW-type Zinc Finger DUF3045 PF11243.8 NODE_61793_length_264_cov_2.733624_g53853_i0forward_frame_3 - 0.061 13.5 0.1 0.077 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3045) Antimicrobial23 PF16048.5 NODE_61791_length_264_cov_2.960699_g53851_i0forward_frame_3 - 0.19 11.4 1.7 16 5.3 0.1 2.4 2 0 0 2 2 2 0 Frog antimicrobial peptide # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks276.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks276.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks276.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks276.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3302 PF11742.8 NODE_61789_length_264_cov_3.000000_g53849_i0reverse_frame_3 - 0.05 13.7 0.4 0.064 13.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3302) Claudin_2 PF13903.6 NODE_61788_length_264_cov_3.170306_g53848_i0reverse_frame_3 - 0.17 11.6 0.2 0.18 11.6 0.2 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction Pkinase PF00069.25 NODE_61787_length_264_cov_3.497817_g53847_i0reverse_frame_2 - 0.00043 19.7 0.0 0.00051 19.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain GTP1_OBG PF01018.22 NODE_61784_length_264_cov_5.475983_g53844_i0reverse_frame_2 - 0.025 14.2 1.1 0.025 14.2 0.2 1.4 1 1 0 1 1 1 0 GTP1/OBG RAMP4 PF06624.12 NODE_61778_length_264_cov_29.248908_g53838_i0reverse_frame_3 - 0.22 11.6 0.1 0.22 11.6 0.1 2.2 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 DUF5439 PF17507.2 NODE_61778_length_264_cov_29.248908_g53838_i0reverse_frame_3 - 4.3 7.6 5.8 26 5.1 2.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5439) DUF5501 PF17605.2 NODE_61777_length_264_cov_29.908297_g53837_i0forward_frame_2 - 0.085 13.3 0.1 0.099 13.1 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5501) YtzH PF14165.6 NODE_61775_length_264_cov_39.502183_g53835_i0reverse_frame_2 - 0.012 16.0 0.6 0.016 15.6 0.1 1.5 2 0 0 2 2 2 0 YtzH-like protein MMM1 PF10296.9 NODE_61770_length_264_cov_47.628821_g53830_i0reverse_frame_3 - 0.25 10.3 4.1 0.31 10.1 4.1 1.0 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 LIM_bind PF01803.16 NODE_61767_length_264_cov_55.388646_g53827_i0forward_frame_2 - 0.035 13.6 0.2 0.042 13.4 0.2 1.0 1 0 0 1 1 1 0 LIM-domain binding protein Ribosomal_L14 PF00238.19 NODE_61760_length_264_cov_60.227074_g53820_i0reverse_frame_2 - 0.055 13.5 0.0 0.056 13.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L14p/L23e DUF5083 PF16890.5 NODE_61760_length_264_cov_60.227074_g53820_i0forward_frame_2 - 0.087 12.6 2.7 0.14 11.9 2.7 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5083) Sdh_cyt PF01127.22 NODE_61759_length_264_cov_62.698690_g53819_i0reverse_frame_3 - 0.057 13.4 0.3 0.067 13.2 0.3 1.1 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CENP-T_N PF16171.5 NODE_61759_length_264_cov_62.698690_g53819_i0forward_frame_2 - 0.041 12.8 3.8 0.04 12.8 3.8 1.0 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T N-terminus AurF PF11583.8 NODE_61758_length_264_cov_62.895197_g53818_i0forward_frame_2 - 0.049 12.9 0.1 0.056 12.7 0.1 1.1 1 0 0 1 1 1 0 P-aminobenzoate N-oxygenase AurF SurA_N PF09312.11 NODE_61754_length_264_cov_78.126638_g53814_i0forward_frame_3 - 0.02 15.0 0.2 0.044 13.8 0.2 1.5 1 1 1 2 2 2 0 SurA N-terminal domain Lipase_GDSL_2 PF13472.6 NODE_61754_length_264_cov_78.126638_g53814_i0forward_frame_3 - 0.02 15.3 0.0 0.022 15.2 0.0 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 NODE_61754_length_264_cov_78.126638_g53814_i0forward_frame_3 - 0.062 13.3 0.0 0.062 13.3 0.0 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase Activator_LAG-3 PF11498.8 NODE_61753_length_264_cov_80.174672_g53813_i0reverse_frame_2 - 0.2 10.6 1.6 0.19 10.6 1.6 1.0 1 0 0 1 1 1 0 Transcriptional activator LAG-3 E3_UFM1_ligase PF09743.9 NODE_61746_length_264_cov_110.165939_g53806_i0forward_frame_2 - 0.018 14.7 0.0 0.021 14.4 0.0 1.1 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 DUF4663 PF15668.5 NODE_61745_length_264_cov_117.781659_g53805_i0forward_frame_2 - 0.016 14.3 0.0 0.018 14.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4663) Ion_trans PF00520.31 NODE_61744_length_264_cov_126.471616_g53804_i0reverse_frame_2 - 6.2e-09 35.4 0.1 6.2e-09 35.4 0.1 1.0 1 0 0 1 1 1 1 Ion transport protein UIM PF02809.20 NODE_61740_length_264_cov_168.362445_g53800_i0reverse_frame_2 - 3.6e-05 23.4 1.6 3.6e-05 23.4 1.6 1.9 2 0 0 2 2 2 1 Ubiquitin interaction motif RE_SinI PF09570.10 NODE_61739_length_264_cov_182.419214_g53799_i0reverse_frame_2 - 0.0095 15.2 0.1 0.011 15.0 0.1 1.1 1 0 0 1 1 1 1 SinI restriction endonuclease UBM PF14377.6 NODE_61739_length_264_cov_182.419214_g53799_i0reverse_frame_2 - 0.054 13.0 0.1 0.082 12.4 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin binding region DUF5357 PF17310.2 NODE_61734_length_264_cov_266.017467_g53794_i0forward_frame_2 - 0.13 10.8 2.2 0.15 10.6 2.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) ArAE_2_N PF10337.9 NODE_61730_length_264_cov_562.965066_g53790_i0forward_frame_3 - 0.13 11.2 0.1 0.16 11.0 0.1 1.0 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal TA0956 PF11513.8 NODE_61727_length_264_cov_1546.842795_g53787_i0reverse_frame_2 - 0.051 13.8 0.1 0.06 13.6 0.1 1.2 1 0 0 1 1 1 0 Thermoplasma acidophilum protein TA0956 CD52 PF15116.6 ORF98985 - 0.15 12.1 0.6 0.23 11.5 0.6 1.4 1 0 0 1 1 1 0 CAMPATH-1 antigen Palm_thioest PF02089.15 ORF98581 - 3e-15 56.7 0.0 3.3e-15 56.6 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase SMC_N PF02463.19 ORF98574 - 0.0017 17.8 0.1 0.0021 17.5 0.1 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF4635 PF15466.6 ORF98554 - 0.067 12.7 1.8 0.079 12.5 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4635) CheC PF04509.12 ORF98419 - 0.2 11.6 1.4 0.37 10.7 0.1 2.0 1 1 1 2 2 2 0 CheC-like family Ribosomal_S19e PF01090.19 ORF97675 - 7.2e-27 93.8 0.8 8e-27 93.6 0.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 ORF97675 - 0.00013 21.9 0.2 0.00018 21.4 0.2 1.2 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain Mrr_N PF14338.6 ORF97675 - 0.037 14.2 0.0 0.05 13.7 0.0 1.2 1 0 0 1 1 1 0 Mrr N-terminal domain HTH_45 PF14947.6 ORF97675 - 0.069 13.1 0.0 0.095 12.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_27 PF13463.6 ORF97675 - 0.09 13.3 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain WD40 PF00400.32 ORF97580 - 2.1e-06 28.3 0.0 0.02 15.7 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat Frtz PF11768.8 ORF97580 - 0.12 10.7 0.0 0.12 10.6 0.0 1.0 1 0 0 1 1 1 0 WD repeat-containing and planar cell polarity effector protein Fritz Pkinase PF00069.25 ORF97486 - 1.8e-27 96.4 0.3 1.9e-27 96.3 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF97486 - 4.4e-19 68.8 0.0 4.6e-19 68.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF97486 - 6.9e-05 22.0 0.1 8.1e-05 21.7 0.1 1.0 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF97486 - 0.00013 21.6 0.0 0.00016 21.4 0.0 1.0 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 ORF97486 - 0.00024 21.1 0.1 0.00058 19.9 0.1 1.5 1 1 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF97486 - 0.0031 16.9 0.0 0.0035 16.7 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF97486 - 0.024 14.2 0.1 0.026 14.1 0.1 1.2 1 1 0 1 1 1 0 Choline/ethanolamine kinase Kinase-like PF14531.6 ORF97486 - 0.094 12.0 0.0 0.098 12.0 0.0 1.1 1 0 0 1 1 1 0 Kinase-like FTA2 PF13095.6 ORF97486 - 0.16 11.6 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 CTX_RstB PF07459.11 ORF97468 - 0.063 13.5 0.2 0.18 12.1 0.1 1.7 2 0 0 2 2 2 0 CTX phage RstB protein RAP1 PF07218.11 ORF97468 - 4.4 5.5 4.3 4.6 5.4 4.3 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF1461 PF07314.11 ORF97135 - 0.21 11.5 0.3 0.21 11.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) Nop52 PF05997.12 ORF97126 - 0.076 12.8 0.1 0.092 12.5 0.1 1.1 1 0 0 1 1 1 0 Nucleolar protein,Nop52 GvpG PF05120.12 ORF96873 - 0.14 12.2 0.5 0.2 11.7 0.5 1.1 1 0 0 1 1 1 0 Gas vesicle protein G DUF349 PF03993.12 ORF96390 - 0.0016 18.7 1.0 0.002 18.4 1.0 1.1 1 0 0 1 1 1 1 Domain of Unknown Function (DUF349) DUF4141 PF13605.6 ORF96390 - 0.018 14.3 1.2 0.025 13.8 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4141) FapA PF03961.13 ORF96390 - 0.32 9.6 3.8 0.33 9.5 3.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF5466 PF17554.2 ORF96099 - 0.12 12.6 1.4 0.18 12.0 1.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5466) TFIID-31kDa PF02291.15 ORF95337 - 0.017 15.2 0.0 0.019 15.1 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Histone PF00125.24 ORF95337 - 0.072 13.5 0.4 0.52 10.7 0.4 1.9 1 1 0 1 1 1 0 Core histone H2A/H2B/H3/H4 GST_C PF00043.25 ORF95092 - 8.8e-11 41.9 0.1 1.1e-10 41.5 0.1 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF95092 - 1.6e-09 37.8 0.1 2e-09 37.5 0.1 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF95092 - 1.4e-07 31.4 0.1 5.7e-07 29.5 0.1 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain EMP24_GP25L PF01105.24 ORF9508 - 0.0042 17.1 0.0 0.0056 16.6 0.0 1.2 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Proteasome PF00227.26 ORF9438 - 6.2e-08 32.3 0.1 7.3e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit tRNA-synt_1e PF01406.19 ORF94312 - 1.9e-34 119.4 1.8 2e-34 119.3 1.8 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 ORF94312 - 0.00028 19.7 0.1 0.00031 19.6 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 ORF94312 - 0.0097 14.2 0.0 0.011 14.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) RyR PF02026.16 ORF94312 - 0.064 13.5 0.5 0.09 13.0 0.5 1.2 1 0 0 1 1 1 0 RyR domain MFS_1 PF07690.16 ORF94089 - 5.2e-05 22.3 0.7 9.4e-05 21.5 0.7 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily OTOS PF15182.6 ORF93776 - 0.049 13.6 0.2 0.13 12.2 0.1 1.7 1 1 1 2 2 2 0 Otospiralin LAT PF15234.6 ORF93736 - 2.1 8.0 4.1 2.4 7.8 4.1 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells FxsA PF04186.13 ORF93673 - 4.2e-11 42.9 3.1 5.1e-11 42.6 3.1 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein DUF3446 PF11928.8 ORF93559 - 0.5 10.7 14.6 0.63 10.4 14.6 1.2 1 0 0 1 1 1 0 Early growth response N-terminal domain G-gamma PF00631.22 ORF93308 - 0.055 13.5 0.3 0.57 10.2 0.1 2.1 1 1 1 2 2 2 0 GGL domain MotA_ExbB PF01618.16 ORF9315 - 0.08 12.7 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family TraU PF06834.11 ORF92522 - 0.088 12.1 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 TraU protein MANEC PF07502.14 ORF92060 - 0.023 15.0 0.0 0.028 14.7 0.0 1.1 1 0 0 1 1 1 0 MANEC domain Fer4_20 PF14691.6 ORF92060 - 0.055 13.2 0.3 0.072 12.9 0.3 1.1 1 0 0 1 1 1 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Aldedh PF00171.22 ORF9204 - 1.2e-31 109.7 0.1 1.4e-31 109.6 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family MHB PF16525.5 ORF9204 - 0.054 13.7 0.0 0.069 13.4 0.0 1.2 1 0 0 1 1 1 0 Haemophore, haem-binding RtcR PF06956.11 ORF92011 - 0.058 12.8 0.2 0.067 12.6 0.2 1.1 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase DUF4813 PF16072.5 ORF91614 - 0.02 14.5 0.0 0.024 14.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4813) Fer4_2 PF12797.7 ORF91593 - 0.019 15.1 2.6 0.04 14.0 2.6 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain GH3 PF03321.13 ORF91399 - 1.1e-22 80.7 0.0 1.1e-22 80.6 0.0 1.0 1 0 0 1 1 1 1 GH3 auxin-responsive promoter Cwf_Cwc_15 PF04889.12 ORF91385 - 0.38 10.5 12.5 0.44 10.2 12.5 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein TFIIF_alpha PF05793.12 ORF91385 - 7.5 5.0 15.0 8.1 4.9 15.0 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) DUF4191 PF13829.6 ORF90832 - 0.28 10.5 2.7 0.33 10.3 2.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DNase_NucA_NucB PF14040.6 ORF90771 - 0.17 12.3 0.0 0.24 11.8 0.0 1.2 1 0 0 1 1 1 0 Deoxyribonuclease NucA/NucB BTB PF00651.31 ORF90546 - 4e-11 43.1 0.1 6e-11 42.5 0.1 1.3 1 0 0 1 1 1 1 BTB/POZ domain DUF5466 PF17554.2 ORF90121 - 0.12 12.6 1.4 0.18 12.0 1.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5466) UCR_hinge PF02320.16 ORF90075 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein DUF3987 PF13148.6 ORF89354 - 0.0081 15.2 0.0 0.0092 15.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3987) UCR_hinge PF02320.16 ORF89272 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein HCMV_UL124 PF17609.2 ORF89083 - 0.011 16.0 0.5 0.011 15.9 0.5 1.2 1 0 0 1 1 1 0 Family of unknown function Glyco_trans_2_3 PF13632.6 ORF89083 - 0.017 15.0 0.1 0.018 15.0 0.1 1.0 1 0 0 1 1 1 0 Glycosyl transferase family group 2 PI3Ka PF00613.20 ORF88670 - 0.12 11.8 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) DUF1358 PF07096.11 ORF8809 - 0.031 14.2 0.0 0.035 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) Reo_sigmaC PF04582.12 ORF8806 - 0.018 15.3 0.0 0.019 15.2 0.0 1.1 1 0 0 1 1 1 0 Reovirus sigma C capsid protein C-terminal domain RHD_DNA_bind PF00554.22 ORF87840 - 0.085 12.8 0.1 0.098 12.6 0.1 1.1 1 0 0 1 1 1 0 Rel homology DNA-binding domain Borrelia_rep PF03183.13 ORF86437 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 1 1 3 3 3 1 Borrelia repeat protein DUF5533 PF17685.1 ORF86437 - 0.28 11.6 7.6 0.41 11.0 7.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5533) Shikimate_dh_N PF08501.11 ORF86244 - 0.017 15.4 0.0 0.023 14.9 0.0 1.2 1 0 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain SRP_TPR_like PF17004.5 ORF86244 - 0.025 14.6 0.4 0.029 14.4 0.4 1.1 1 0 0 1 1 1 0 Putative TPR-like repeat NosD PF05048.13 ORF86130 - 7.9e-05 22.0 0.3 8.1e-05 22.0 0.3 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 ORF86130 - 0.01 15.7 0.1 0.012 15.5 0.1 1.1 1 0 0 1 1 1 0 Right handed beta helix region SMN PF06003.12 ORF86028 - 0.066 12.5 1.7 0.077 12.3 1.7 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) NUDE_C PF04880.13 ORF86028 - 3.9 7.9 6.6 4.5 7.7 6.6 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region CD52 PF15116.6 ORF84904 - 0.15 12.1 0.6 0.23 11.5 0.6 1.4 1 0 0 1 1 1 0 CAMPATH-1 antigen DUF2764 PF10962.8 ORF84779 - 0.033 13.7 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2764) PTR2 PF00854.21 ORF84710 - 9.7e-05 21.4 1.0 0.0001 21.3 0.0 1.5 2 0 0 2 2 2 1 POT family Cytochrom_B_C PF00032.17 ORF84710 - 0.13 12.6 3.1 0.23 11.8 3.0 1.7 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD Erf4 PF10256.9 ORF84572 - 0.021 14.9 0.0 0.021 14.9 0.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family INTAP PF16617.5 ORF84156 - 0.034 14.5 2.5 0.042 14.2 2.5 1.2 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region BBP2_2 PF10082.9 ORF83972 - 0.1 11.4 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Putative beta-barrel porin 2 Slx4 PF09494.10 ORF8346 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Slx4 endonuclease YMF19 PF02326.15 ORF83458 - 0.25 12.2 3.8 0.25 12.1 3.2 1.4 1 1 0 1 1 1 0 Plant ATP synthase F0 Band_7 PF01145.25 ORF83311 - 1.1e-13 51.6 0.0 1.1e-13 51.5 0.0 1.0 1 0 0 1 1 1 1 SPFH domain / Band 7 family DUF1768 PF08719.11 ORF82766 - 0.062 13.5 1.0 0.066 13.4 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1768) Antimicrobial_6 PF08036.11 ORF82520 - 1.2 9.2 9.5 0.32 11.1 6.1 1.8 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide Tryp_inh PF17983.1 ORF82520 - 9 6.5 15.5 8.6 6.5 0.4 3.2 2 1 0 2 2 2 0 Trypsin inhibitors 1,2 and 3 RWD PF05773.22 ORF82241 - 0.013 15.8 0.5 0.013 15.8 0.5 1.1 1 0 0 1 1 1 0 RWD domain UPF0193 PF05250.11 ORF82043 - 0.0069 16.2 2.2 0.0077 16.1 2.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0193) AUX_IAA PF02309.16 ORF81563 - 0.068 13.0 0.1 0.084 12.7 0.1 1.1 1 0 0 1 1 1 0 AUX/IAA family UQ_con PF00179.26 ORF81157 - 6.3e-27 93.9 0.0 6.9e-27 93.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme G6B PF15096.6 ORF80910 - 0.041 13.7 0.7 0.059 13.2 0.5 1.4 1 1 0 1 1 1 0 G6B family Reo_sigmaC PF04582.12 ORF80847 - 0.018 15.3 0.0 0.019 15.2 0.0 1.1 1 0 0 1 1 1 0 Reovirus sigma C capsid protein C-terminal domain DUF1358 PF07096.11 ORF80844 - 0.031 14.2 0.0 0.035 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) Ribosomal_L5 PF00281.19 ORF80677 - 0.0039 17.5 1.0 0.0075 16.6 1.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 MarB PF13999.6 ORF80507 - 0.095 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 MarB protein Borrelia_rep PF03183.13 ORF80349 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 1 1 3 3 3 1 Borrelia repeat protein DUF5533 PF17685.1 ORF80349 - 0.28 11.6 7.6 0.41 11.0 7.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5533) FOP_dimer PF09398.10 ORF80286 - 0.017 15.4 0.0 0.02 15.2 0.0 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain Nuf2 PF03800.14 ORF78662 - 0.0025 17.9 0.5 0.0028 17.8 0.5 1.1 1 0 0 1 1 1 1 Nuf2 family Whib PF02467.16 ORF7835 - 0.0025 18.4 0.2 0.0036 17.9 0.2 1.2 1 0 0 1 1 1 1 Transcription factor WhiB ArsA_ATPase PF02374.15 ORF7827 - 7.2e-29 100.9 0.1 8.4e-29 100.7 0.1 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.6 ORF7827 - 6.8e-09 35.9 0.0 8.4e-09 35.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 ORF7827 - 2.6e-07 30.7 0.0 2.8e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 ORF7827 - 5.3e-05 22.8 0.0 5.5e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NB-ARC PF00931.22 ORF7827 - 0.0001 21.6 0.0 0.00011 21.5 0.0 1.1 1 0 0 1 1 1 1 NB-ARC domain CBP_BcsQ PF06564.12 ORF7827 - 0.00019 21.0 0.0 0.00023 20.7 0.0 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Zeta_toxin PF06414.12 ORF7827 - 0.00072 18.9 0.0 0.00077 18.8 0.0 1.1 1 0 0 1 1 1 1 Zeta toxin ParA PF10609.9 ORF7827 - 0.00096 18.7 0.2 0.0013 18.3 0.2 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase SRP54 PF00448.22 ORF7827 - 0.0032 17.1 0.0 0.0038 16.9 0.0 1.1 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain PhoH PF02562.16 ORF7827 - 0.013 15.0 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 PhoH-like protein AAA_18 PF13238.6 ORF7827 - 0.02 15.4 0.0 0.025 15.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF7827 - 0.057 13.1 0.1 0.071 12.8 0.1 1.1 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF7827 - 0.075 12.0 0.0 0.085 11.8 0.0 1.0 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 ORF7827 - 0.11 12.2 0.2 0.15 11.8 0.2 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein CTP_synth_N PF06418.14 ORF7827 - 0.12 11.7 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 CTP synthase N-terminus AAA_25 PF13481.6 ORF7827 - 0.12 12.0 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 ORF7827 - 0.18 10.9 0.0 0.22 10.7 0.0 1.1 1 0 0 1 1 1 0 PIF1-like helicase GCD14_N PF14801.6 ORF78253 - 0.0012 18.7 0.1 0.0025 17.6 0.0 1.5 2 0 0 2 2 2 1 tRNA methyltransferase complex GCD14 subunit N-term Monellin PF09200.10 ORF77890 - 0.12 12.3 0.7 0.16 11.8 0.1 1.5 2 0 0 2 2 2 0 Monellin BCIP PF13862.6 ORF77189 - 0.09 12.5 6.0 0.097 12.4 6.0 1.0 1 0 0 1 1 1 0 p21-C-terminal region-binding protein CRA PF06589.11 ORF77189 - 0.87 9.7 7.6 1 9.5 7.6 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) DUF2530 PF10745.9 ORF77072 - 0.058 13.6 1.9 0.38 11.0 1.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2530) Longin PF13774.6 ORF76514 - 7.6e-07 29.1 0.0 7.6e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Regulated-SNARE-like domain Ank_5 PF13857.6 ORF76110 - 7e-10 39.0 0.3 1e-09 38.5 0.3 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF76110 - 1.4e-07 32.0 0.0 1.7e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF76110 - 1.2e-06 29.0 0.1 2.2e-06 28.1 0.0 1.5 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF76110 - 6.8e-06 26.3 0.2 0.00056 20.2 0.0 3.0 4 0 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF76110 - 7.8e-05 22.8 0.1 0.0011 19.3 0.0 2.4 3 0 0 3 3 3 1 Ankyrin repeat UQ_con PF00179.26 ORF75752 - 5.3e-06 26.1 0.0 6.8e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Enolase_C PF00113.22 ORF75752 - 0.056 12.7 0.0 0.06 12.6 0.0 1.0 1 0 0 1 1 1 0 Enolase, C-terminal TIM barrel domain Nab2p_Zf1 PF18260.1 ORF75735 - 0.45 10.5 7.9 4.5 7.3 0.2 2.5 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 PET117 PF15786.5 ORF75677 - 4.9e-15 55.5 1.0 7e-15 55.1 1.0 1.1 1 0 0 1 1 1 1 PET assembly of cytochrome c oxidase, mitochondrial DUF2681 PF10883.8 ORF75677 - 0.0069 16.8 2.2 0.0092 16.4 2.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2681) Roughex PF06020.11 ORF75677 - 0.058 12.5 1.8 0.056 12.5 1.8 1.1 1 0 0 1 1 1 0 Drosophila roughex protein UCR_hinge PF02320.16 ORF74682 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein TT_ORF2a PF08197.11 ORF743 - 0.051 13.6 0.4 0.16 12.0 0.1 1.9 1 1 1 2 2 2 0 pORF2a truncated protein Smr PF01713.21 ORF74168 - 2.8e-17 62.8 0.0 3.4e-17 62.6 0.0 1.1 1 0 0 1 1 1 1 Smr domain Pro_sub2 PF18513.1 ORF74116 - 0.031 14.4 0.1 0.046 13.9 0.1 1.2 1 0 0 1 1 1 0 Prodomain subtilisin 2 P22_AR_C PF10548.9 ORF74116 - 0.11 12.7 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 P22AR C-terminal domain Pkinase PF00069.25 ORF73914 - 1.9e-06 27.5 0.0 2e-06 27.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73914 - 0.0016 17.8 0.0 0.0017 17.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Borrelia_rep PF03183.13 ORF73267 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 1 1 3 3 3 1 Borrelia repeat protein DUF5533 PF17685.1 ORF73267 - 0.28 11.6 7.6 0.41 11.0 7.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5533) Prolamin_like PF05617.11 ORF73253 - 0.59 10.3 9.3 2.9 8.1 9.3 2.3 1 1 0 1 1 1 0 Prolamin-like DUF3290 PF11694.8 ORF72665 - 0.12 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DM PF00751.18 ORF72561 - 7.8 6.5 12.2 6.5 6.7 2.8 2.5 2 1 0 2 2 2 0 DM DNA binding domain PetG PF02529.15 ORF72462 - 0.073 12.9 0.8 0.12 12.2 0.8 1.4 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit 5 Homeodomain PF00046.29 ORF72269 - 0.011 15.6 0.7 0.014 15.2 0.7 1.3 1 1 0 1 1 1 0 Homeodomain Remorin_C PF03763.13 ORF72269 - 0.5 10.3 5.6 6.5 6.7 0.1 2.1 2 0 0 2 2 2 0 Remorin, C-terminal region Ribosomal_L12 PF00542.19 ORF72166 - 4.3e-20 71.8 6.3 6e-20 71.4 6.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L22 PF00237.19 ORF72166 - 0.11 12.7 0.3 0.2 11.9 0.2 1.6 1 1 0 1 1 1 0 Ribosomal protein L22p/L17e DUF3629 PF12302.8 ORF71818 - 0.032 13.7 0.8 0.037 13.5 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3629) DUF1176 PF06674.11 ORF71621 - 0.22 10.9 2.4 0.26 10.7 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1176) DUF2884 PF11101.8 ORF70654 - 0.021 14.4 0.5 0.023 14.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) DUF1822 PF08852.11 ORF70047 - 0.042 12.9 0.0 0.054 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1822) Dynein_light PF01221.18 ORF70036 - 1.6e-22 79.6 2.7 1.8e-22 79.5 2.7 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Peptidase_C2 PF00648.21 ORF70005 - 5.7e-06 25.6 0.5 6.5e-06 25.4 0.5 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease MATH PF00917.26 ORF70005 - 0.0015 18.7 0.4 0.002 18.3 0.4 1.2 1 0 0 1 1 1 1 MATH domain Indigoidine_A PF04227.12 ORF69943 - 1e-21 77.6 0.1 1.1e-21 77.4 0.1 1.0 1 0 0 1 1 1 1 Indigoidine synthase A like protein FOP_dimer PF09398.10 ORF69503 - 0.017 15.4 0.0 0.02 15.2 0.0 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain DHHC PF01529.20 ORF69358 - 3.7e-13 49.8 8.4 3.7e-13 49.8 8.4 1.9 2 0 0 2 2 2 1 DHHC palmitoyltransferase tRNA-synt_1g PF09334.11 ORF69358 - 0.04 12.7 0.5 0.045 12.5 0.5 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (M) DUF1477 PF07346.11 ORF69358 - 0.1 12.9 0.5 0.37 11.1 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1477) BAMBI PF06211.12 ORF69141 - 0.057 13.7 2.1 0.069 13.4 2.1 1.3 1 0 0 1 1 1 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain Pollen_Ole_e_I PF01190.17 ORF69141 - 0.085 13.3 4.7 0.73 10.3 0.3 2.1 1 1 1 2 2 2 0 Pollen proteins Ole e I like RNase_J_C PF17770.1 ORF6913 - 0.065 14.3 1.3 0.071 14.2 0.4 1.5 2 0 0 2 2 2 0 Ribonuclease J C-terminal domain DENN PF02141.21 ORF68749 - 0.0098 15.9 0.0 0.01 15.8 0.0 1.1 1 0 0 1 1 1 1 DENN (AEX-3) domain Stanniocalcin PF03298.13 ORF68365 - 0.15 11.3 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Stanniocalcin family ExbD PF02472.16 ORF68327 - 0.23 11.6 0.0 0.28 11.4 0.0 1.1 1 0 0 1 1 1 0 Biopolymer transport protein ExbD/TolR Cir_Bir_Yir PF06022.11 ORF67925 - 0.015 14.8 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 Plasmodium variant antigen protein Cir/Yir/Bir Occludin_ELL PF07303.13 ORF67925 - 0.02 15.6 0.1 0.025 15.3 0.1 1.2 1 0 0 1 1 1 0 Occludin homology domain Methyltransf_20 PF12147.8 ORF67903 - 0.11 11.6 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase ATP-synt_8 PF00895.20 ORF67825 - 0.46 11.0 7.9 1.8 9.1 7.9 2.0 1 1 0 1 1 1 0 ATP synthase protein 8 DUF3015 PF11220.8 ORF67791 - 0.15 11.9 0.3 0.24 11.3 0.3 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3015) Ribosomal_L11 PF00298.19 ORF67111 - 4.1e-13 49.6 0.0 4.8e-13 49.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain CorC_HlyC PF03471.17 ORF67111 - 0.037 14.0 0.0 0.047 13.7 0.0 1.2 1 0 0 1 1 1 0 Transporter associated domain Borrelia_rep PF03183.13 ORF66768 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 1 1 3 3 3 1 Borrelia repeat protein DUF5533 PF17685.1 ORF66768 - 0.28 11.6 7.6 0.41 11.0 7.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5533) CENP-B_N PF04218.13 ORF66424 - 0.14 11.9 0.8 11 5.7 0.2 2.3 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain EGF PF00008.27 ORF64984 - 0.099 13.0 0.1 0.099 13.0 0.1 2.7 3 0 0 3 3 3 0 EGF-like domain OrgA_MxiK PF09482.10 ORF64847 - 0.031 14.1 0.1 0.032 14.1 0.1 1.1 1 0 0 1 1 1 0 Bacterial type III secretion apparatus protein (OrgA_MxiK) RINGv PF12906.7 ORF64847 - 0.073 13.2 0.1 0.13 12.4 0.1 1.4 1 0 0 1 1 1 0 RING-variant domain UCR_hinge PF02320.16 ORF64759 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein DUF1419 PF07215.11 ORF63813 - 0.062 13.4 0.0 0.081 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1419) TMEM164 PF14808.6 ORF63802 - 0.1 11.9 3.7 0.12 11.7 3.7 1.1 1 0 0 1 1 1 0 TMEM164 family Proteasome PF00227.26 ORF63353 - 6.2e-08 32.3 0.1 7.3e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit OPA3 PF07047.12 ORF62856 - 0.036 13.8 0.9 0.041 13.7 0.9 1.1 1 0 0 1 1 1 0 Optic atrophy 3 protein (OPA3) Aldedh PF00171.22 ORF62555 - 0.019 13.5 0.0 0.019 13.5 0.0 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family RhodobacterPufX PF11511.8 ORF61846 - 7.7 6.2 6.4 17 5.1 1.7 2.3 2 1 0 2 2 2 0 Intrinsic membrane protein PufX DUF5389 PF17364.2 ORF61322 - 0.016 15.2 0.4 0.019 15.0 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5389) Borrelia_rep PF03183.13 ORF61186 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 1 1 3 3 3 1 Borrelia repeat protein DUF5533 PF17685.1 ORF61186 - 0.28 11.6 7.6 0.41 11.0 7.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5533) VitD-bind_III PF09164.10 ORF60242 - 0.059 13.4 0.2 0.082 12.9 0.2 1.3 1 0 0 1 1 1 0 Vitamin D binding protein, domain III RhoGEF67_u1 PF16615.5 ORF59834 - 1.1 9.8 9.3 12 6.5 9.0 2.0 2 0 0 2 2 2 0 Unstructured region one on RhoGEF 6 and 7 YabA PF06156.13 ORF59586 - 0.031 14.9 0.8 0.041 14.5 0.8 1.4 1 1 0 1 1 1 0 Initiation control protein YabA DNA_ligase_OB_2 PF14743.6 ORF59485 - 4.2e-29 100.4 0.4 5e-29 100.1 0.4 1.1 1 0 0 1 1 1 1 DNA ligase OB-like domain DUF4477 PF14780.6 ORF59397 - 0.0061 16.2 2.1 0.0063 16.2 2.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4477) VTC PF09359.10 ORF59397 - 0.09 12.2 0.1 0.099 12.0 0.1 1.1 1 0 0 1 1 1 0 VTC domain Beta-lactamase PF00144.24 ORF58913 - 2.9e-08 33.3 0.2 3e-08 33.3 0.2 1.0 1 0 0 1 1 1 1 Beta-lactamase Phage_NinH PF06322.11 ORF58242 - 0.093 12.6 0.6 0.35 10.8 0.1 1.9 2 0 0 2 2 2 0 Phage NinH protein TMEM101 PF15111.6 ORF58242 - 0.096 12.2 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 TMEM101 protein family DUF5051 PF16473.5 ORF57947 - 0.15 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 3' exoribonuclease, RNase T-like DUF667 PF05018.13 ORF56216 - 0.0064 16.2 0.1 0.0075 16.0 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF667) UPF0515 PF15135.6 ORF55502 - 0.037 13.4 0.8 0.039 13.3 0.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 B277 PF17623.2 ORF54986 - 6.1 5.8 5.2 1.8 7.6 2.1 1.6 2 0 0 2 2 2 0 Domain of unknown function Reoviridae_Vp9 PF08978.10 ORF54779 - 0.029 13.6 0.2 0.036 13.3 0.2 1.2 1 0 0 1 1 1 0 Reoviridae VP9 AT_hook PF02178.19 ORF54474 - 0.94 9.6 8.5 5.8 7.1 0.2 2.5 2 0 0 2 2 2 0 AT hook motif Prp19 PF08606.11 ORF53432 - 0.015 15.3 0.4 0.027 14.4 0.4 1.4 1 0 0 1 1 1 0 Prp19/Pso4-like KLRAQ PF10205.9 ORF53432 - 0.016 15.4 2.4 0.022 15.0 2.4 1.1 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein DivIC PF04977.15 ORF53432 - 0.023 14.5 2.3 0.023 14.5 2.3 1.8 2 0 0 2 2 2 0 Septum formation initiator T4SS_TraI PF16932.5 ORF53039 - 0.0085 15.3 0.0 0.0097 15.1 0.0 1.1 1 0 0 1 1 1 1 Type IV secretory system, conjugal DNA-protein transfer Ank_5 PF13857.6 ORF5265 - 0.00086 19.6 0.3 0.0014 18.9 0.3 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF5265 - 0.01 16.3 0.0 0.018 15.5 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat Ank_2 PF12796.7 ORF5265 - 0.013 16.1 0.1 0.023 15.3 0.1 1.4 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Nuf2 PF03800.14 ORF52280 - 0.0025 17.9 0.5 0.0028 17.8 0.5 1.1 1 0 0 1 1 1 1 Nuf2 family VIT_2 PF13757.6 ORF51495 - 0.0054 16.6 0.0 0.0073 16.2 0.0 1.2 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VIT PF08487.10 ORF51495 - 0.089 13.0 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Vault protein inter-alpha-trypsin domain CD52 PF15116.6 ORF51038 - 0.15 12.1 0.6 0.23 11.5 0.6 1.4 1 0 0 1 1 1 0 CAMPATH-1 antigen Dynactin_p22 PF07426.11 ORF50523 - 3.7e-06 26.9 1.5 4.6e-06 26.6 1.5 1.1 1 0 0 1 1 1 1 Dynactin subunit p22 LEDGF PF11467.8 ORF50523 - 0.044 13.4 0.2 0.21 11.2 0.2 1.9 1 1 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) Mg_chelatase PF01078.21 ORF50014 - 0.014 14.8 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI YfkD PF14167.6 ORF49283 - 0.19 10.9 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 YfkD-like protein Urease_linker PF18473.1 ORF48990 - 0.22 11.4 0.6 13 5.7 0.1 2.4 2 0 0 2 2 2 0 Urease subunit beta-alpha linker domain DUF4435 PF14491.6 ORF48384 - 0.021 14.7 3.1 0.023 14.6 3.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) DASH_Dad1 PF08649.10 ORF48384 - 0.13 12.5 0.9 0.29 11.4 0.9 1.5 1 0 0 1 1 1 0 DASH complex subunit Dad1 Pkinase PF00069.25 ORF48188 - 0.00028 20.4 0.0 0.00029 20.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain GrpE PF01025.19 ORF4800 - 1.7e-19 70.1 1.3 1.9e-19 69.9 1.3 1.0 1 0 0 1 1 1 1 GrpE Hormone_3 PF00159.18 ORF47258 - 0.11 12.6 0.1 0.23 11.5 0.1 1.6 1 0 0 1 1 1 0 Pancreatic hormone peptide DcuA_DcuB PF03605.14 ORF47258 - 0.18 10.7 0.2 0.19 10.6 0.2 1.0 1 0 0 1 1 1 0 Anaerobic c4-dicarboxylate membrane transporter Borrelia_rep PF03183.13 ORF46894 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 1 1 3 3 3 1 Borrelia repeat protein DUF5533 PF17685.1 ORF46894 - 0.28 11.6 7.6 0.41 11.0 7.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5533) IBR PF01485.21 ORF46583 - 0.017 15.3 0.1 0.02 15.1 0.1 1.1 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Homeodomain PF00046.29 ORF46537 - 0.011 15.6 0.7 0.014 15.2 0.7 1.3 1 1 0 1 1 1 0 Homeodomain Remorin_C PF03763.13 ORF46537 - 0.5 10.3 5.6 6.5 6.7 0.1 2.1 2 0 0 2 2 2 0 Remorin, C-terminal region Transglut_C PF00927.22 ORF46358 - 0.029 14.5 0.0 0.031 14.4 0.0 1.2 1 0 0 1 1 1 0 Transglutaminase family, C-terminal ig like domain Ubiquitin_3 PF14836.6 ORF46358 - 0.13 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-like domain Flavoprotein PF02441.19 ORF4632 - 0.12 12.1 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Flavoprotein PheRS_DBD2 PF18554.1 ORF4632 - 0.12 12.3 1.8 3.8 7.6 0.0 2.6 3 0 0 3 3 3 0 PheRS DNA binding domain 2 RRM_1 PF00076.22 ORF45570 - 8.9e-06 25.4 0.0 1.6e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Neisseria_TspB PF05616.13 ORF45525 - 0.63 8.5 1.2 0.73 8.2 1.2 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Monellin PF09200.10 ORF44631 - 0.12 12.3 0.7 0.16 11.8 0.1 1.5 2 0 0 2 2 2 0 Monellin C5HCH PF17982.1 ORF44582 - 0.055 13.6 0.7 0.1 12.7 0.7 1.5 1 0 0 1 1 1 0 NSD Cys-His rich domain NapE PF06796.11 ORF44512 - 0.066 12.7 0.1 0.09 12.3 0.1 1.3 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE Pkinase PF00069.25 ORF44145 - 0.00028 20.4 0.0 0.00029 20.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Borrelia_rep PF03183.13 ORF43558 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 1 1 3 3 3 1 Borrelia repeat protein DUF5533 PF17685.1 ORF43558 - 0.28 11.6 7.6 0.41 11.0 7.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5533) NTF2 PF02136.20 ORF43069 - 1.2e-15 58.1 0.0 1.4e-15 58.0 0.0 1.0 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain Proteasome PF00227.26 ORF42188 - 6.2e-08 32.3 0.1 7.3e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit RseC_MucC PF04246.12 ORF42171 - 3.5 7.6 5.7 0.64 10.0 1.0 1.8 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC UPF0220 PF05255.11 ORF4213 - 0.08 12.5 0.4 0.086 12.4 0.4 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) DUF3377 PF11857.8 ORF41990 - 3.3 7.7 5.8 1.2 9.1 3.1 1.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3377) SH3_15 PF18346.1 ORF41205 - 0.0021 18.3 0.9 0.0057 16.9 0.9 1.7 1 1 0 1 1 1 1 Mind bomb SH3 repeat domain Vicilin_N PF04702.12 ORF41116 - 0.2 11.5 3.3 0.32 10.8 3.3 1.3 1 1 0 1 1 1 0 Vicilin N terminal region Proteasome PF00227.26 ORF41082 - 6.2e-08 32.3 0.1 7.3e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Cornichon PF03311.14 ORF40024 - 0.012 16.0 1.6 0.013 15.8 1.6 1.1 1 0 0 1 1 1 0 Cornichon protein Ank_2 PF12796.7 ORF3959 - 5.5e-12 46.1 0.0 1.2e-11 45.0 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF3959 - 2.1e-11 43.7 1.1 0.00018 21.8 0.5 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF3959 - 2.2e-10 40.5 0.4 6.4e-06 26.3 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF3959 - 5.5e-10 39.6 0.1 8.3e-07 29.4 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF3959 - 9.7e-10 37.9 0.1 3.1e-05 24.0 0.1 2.2 2 0 0 2 2 2 2 Ankyrin repeat Cytochrom_C552 PF02335.15 ORF3959 - 0.052 12.5 0.0 0.057 12.3 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c552 CDKN3 PF05706.12 ORF3959 - 0.061 13.0 0.0 0.08 12.6 0.0 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) AvrM-A PF18241.1 ORF38904 - 0.017 15.5 2.2 0.021 15.2 2.2 1.1 1 0 0 1 1 1 0 Flax-rust effector AvrM-A Inhibitor_G39P PF11417.8 ORF38904 - 0.041 14.4 0.5 0.061 13.9 0.4 1.4 1 1 0 1 1 1 0 Loader and inhibitor of phage G40P eIF-4B PF06273.11 ORF38904 - 0.75 8.8 5.1 0.87 8.6 5.1 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B cNMP_binding PF00027.29 ORF38361 - 2.4e-07 30.7 0.0 2.8e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Proteasome PF00227.26 ORF3830 - 6.2e-08 32.3 0.1 7.3e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Mid2 PF04478.12 ORF38298 - 0.033 14.0 0.4 0.039 13.8 0.4 1.1 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor PilP PF04351.13 ORF38082 - 0.25 11.3 1.8 0.28 11.1 1.8 1.0 1 0 0 1 1 1 0 Pilus assembly protein, PilP RRM_1 PF00076.22 ORF37809 - 0.041 13.7 0.0 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Complex1_LYR PF05347.15 ORF37605 - 0.00034 20.6 0.5 0.00044 20.2 0.5 1.2 1 0 0 1 1 1 1 Complex 1 protein (LYR family) MORN PF02493.20 ORF37298 - 1.7e-08 33.8 31.1 0.0003 20.5 5.9 4.7 4 1 0 4 4 4 4 MORN repeat YabA PF06156.13 ORF37203 - 0.031 14.9 0.8 0.041 14.5 0.8 1.4 1 1 0 1 1 1 0 Initiation control protein YabA DM PF00751.18 ORF3716 - 7.8 6.5 12.2 6.5 6.7 2.8 2.5 2 1 0 2 2 2 0 DM DNA binding domain DUF493 PF04359.14 ORF36421 - 8.7e-29 99.9 0.0 9.7e-29 99.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF493) HisG_C PF08029.11 ORF36421 - 0.0084 16.2 0.1 0.011 15.9 0.1 1.2 1 0 0 1 1 1 1 HisG, C-terminal domain DUF885 PF05960.11 ORF36021 - 0.29 10.8 0.7 0.34 10.5 0.7 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) Phage_TTP_12 PF16461.5 ORF35634 - 0.045 13.5 0.1 0.053 13.2 0.1 1.1 1 0 0 1 1 1 0 Lambda phage tail tube protein, TTP Acetyltransf_1 PF00583.25 ORF35341 - 1.8e-09 37.8 0.0 2.5e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF35341 - 0.002 18.5 0.0 0.0028 18.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Sep15_SelM PF08806.11 ORF35341 - 0.039 14.1 0.0 0.053 13.7 0.0 1.2 1 0 0 1 1 1 0 Sep15/SelM redox domain FR47 PF08445.10 ORF35341 - 0.051 13.5 0.0 0.07 13.1 0.0 1.2 1 0 0 1 1 1 0 FR47-like protein Methyltransf_21 PF05050.12 ORF35190 - 7.8e-05 22.8 0.1 8.7e-05 22.6 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain Cupin_3 PF05899.12 ORF34721 - 1.3e-20 72.8 2.2 1.5e-20 72.6 2.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 ORF34721 - 4.5e-05 23.1 0.0 6.2e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Cupin domain EutQ PF06249.12 ORF34721 - 0.0033 17.2 0.0 0.0037 17.0 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_1 PF00190.22 ORF34721 - 0.14 11.8 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Cupin MarB PF13999.6 ORF34663 - 0.095 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 MarB protein Ras PF00071.22 ORF34467 - 5e-23 81.5 0.1 5.4e-23 81.4 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF34467 - 1e-17 64.4 0.1 1.1e-17 64.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF34467 - 6.2e-06 25.8 0.0 6.2e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF34467 - 0.033 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF34467 - 0.038 13.4 0.0 0.038 13.4 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Yeast-kill-tox PF09207.11 ORF34217 - 0.099 13.3 0.0 0.13 12.9 0.0 1.1 1 0 0 1 1 1 0 Yeast killer toxin DUF5090 PF17009.5 ORF33835 - 0.18 11.8 8.4 0.19 11.7 8.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) SPATA1_C PF15743.5 ORF33634 - 0.039 14.0 1.9 0.04 14.0 1.9 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus UCR_hinge PF02320.16 ORF33541 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein DUF4590 PF15257.6 ORF32265 - 0.5 10.3 5.0 0.6 10.0 5.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4590) Borrelia_rep PF03183.13 ORF31647 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 0 0 2 2 2 1 Borrelia repeat protein Folate_carrier PF01770.18 ORF31390 - 0.052 12.3 2.8 0.062 12.0 2.8 1.0 1 0 0 1 1 1 0 Reduced folate carrier DUF3450 PF11932.8 ORF31339 - 0.26 10.6 0.0 0.31 10.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) bPH_6 PF10756.9 ORF30943 - 0.11 12.6 0.0 0.15 12.2 0.0 1.4 1 1 0 1 1 1 0 Bacterial PH domain QIL1 PF15884.5 ORF30740 - 0.074 13.6 0.0 0.1 13.2 0.0 1.2 1 0 0 1 1 1 0 MICOS complex subunit MIC13, QIL1 C5HCH PF17982.1 ORF30090 - 0.055 13.6 0.7 0.1 12.7 0.7 1.5 1 0 0 1 1 1 0 NSD Cys-His rich domain AAA_27 PF13514.6 ORF29593 - 0.1 12.2 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 AAA domain UCR_hinge PF02320.16 ORF2958 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein Band_7 PF01145.25 ORF29485 - 1.1e-13 51.6 0.0 1.1e-13 51.5 0.0 1.0 1 0 0 1 1 1 1 SPFH domain / Band 7 family Aft1_OSA PF11785.8 ORF2947 - 0.058 13.8 0.6 0.12 12.8 0.6 1.6 1 0 0 1 1 1 0 Aft1 osmotic stress response (OSM) domain DUF3747 PF12565.8 ORF2947 - 0.08 12.3 0.1 0.094 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3747) LCE6A PF15858.5 ORF2901 - 0.014 16.1 0.2 0.019 15.7 0.2 1.4 1 1 0 1 1 1 0 Late cornified envelope protein 6A family DUF1822 PF08852.11 ORF28668 - 0.042 12.9 0.0 0.054 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1822) Toxin_8 PF07365.12 ORF28154 - 0.027 14.6 1.5 0.041 14.1 1.5 1.3 1 0 0 1 1 1 0 Alpha conotoxin precursor EAL PF00563.20 ORF27686 - 0.00015 21.4 0.0 0.00017 21.2 0.0 1.0 1 0 0 1 1 1 1 EAL domain C5HCH PF17982.1 ORF27232 - 0.055 13.6 0.7 0.1 12.7 0.7 1.5 1 0 0 1 1 1 0 NSD Cys-His rich domain PC-Esterase PF13839.6 ORF2695 - 0.014 15.2 0.4 0.014 15.2 0.4 1.2 1 0 0 1 1 1 0 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p UQ_con PF00179.26 ORF26426 - 8.7e-19 67.6 0.1 1e-18 67.4 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF26426 - 0.035 14.4 0.1 0.041 14.2 0.1 1.1 1 0 0 1 1 1 0 RWD domain BLOC1_2 PF10046.9 ORF26239 - 0.00064 20.0 4.0 0.00079 19.7 4.0 1.1 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Phage_GP20 PF06810.11 ORF26239 - 0.0065 16.3 7.2 0.15 11.8 7.7 1.9 1 1 1 2 2 2 2 Phage minor structural protein GP20 DUF3523 PF12037.8 ORF26239 - 0.0087 15.5 2.3 0.0097 15.3 2.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3523) TACC_C PF05010.14 ORF26239 - 0.0096 15.7 6.4 0.038 13.8 6.4 1.7 1 1 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF16 PF01519.16 ORF26239 - 0.015 15.7 4.2 0.02 15.4 4.2 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 Mt_ATP-synt_D PF05873.12 ORF26239 - 0.021 14.7 2.8 0.023 14.5 2.8 1.1 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) Spc7 PF08317.11 ORF26239 - 0.023 13.6 5.2 0.026 13.4 5.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Endotoxin_N PF03945.14 ORF26239 - 0.029 14.1 2.5 0.033 13.9 2.5 1.1 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain Med4 PF10018.9 ORF26239 - 0.032 13.9 2.4 0.038 13.7 2.4 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Nbl1_Borealin_N PF10444.9 ORF26239 - 0.041 13.5 1.6 0.072 12.7 1.6 1.6 1 1 0 1 1 1 0 Nbl1 / Borealin N terminal DUF641 PF04859.12 ORF26239 - 0.042 14.2 4.2 0.058 13.7 4.2 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Rad50_zn_hook PF04423.14 ORF26239 - 0.053 13.4 1.2 1.5 8.8 0.1 2.6 2 1 0 2 2 2 0 Rad50 zinc hook motif DUF5082 PF16888.5 ORF26239 - 0.061 13.6 6.2 0.05 13.9 3.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) SpmSyn_N PF17950.1 ORF26239 - 0.08 13.1 1.1 0.1 12.8 0.5 1.5 1 1 1 2 2 2 0 S-adenosylmethionine decarboxylase N -terminal Fzo_mitofusin PF04799.13 ORF26239 - 0.08 12.5 3.1 0.093 12.3 3.1 1.1 1 0 0 1 1 1 0 fzo-like conserved region DUF3560 PF12083.8 ORF26239 - 0.1 12.8 2.9 0.12 12.6 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3560) DUF2911 PF11138.8 ORF26239 - 0.1 12.5 1.0 0.13 12.2 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2911) Attractin PF08037.11 ORF26239 - 0.11 12.5 0.1 0.18 11.9 0.1 1.5 1 1 0 1 1 1 0 Attractin family G_path_suppress PF15991.5 ORF26239 - 0.11 12.6 4.6 0.13 12.4 4.6 1.0 1 0 0 1 1 1 0 G-protein pathway suppressor TPR_MLP1_2 PF07926.12 ORF26239 - 0.12 12.5 6.4 0.14 12.2 6.4 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Fib_alpha PF08702.10 ORF26239 - 0.16 12.2 5.0 0.19 11.9 5.0 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family MMR_HSR1_C PF08438.10 ORF26239 - 0.27 11.8 3.2 0.3 11.6 3.2 1.1 1 0 0 1 1 1 0 GTPase of unknown function C-terminal DUF5345 PF17280.2 ORF26239 - 0.27 11.2 2.1 5.5 7.0 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5345) XhlA PF10779.9 ORF26239 - 1.5 9.1 9.0 40 4.5 9.0 2.3 1 1 0 1 1 1 0 Haemolysin XhlA Mg_chelatase PF01078.21 ORF26169 - 0.014 14.8 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NRho PF16733.5 ORF25570 - 0.041 13.9 0.1 0.059 13.4 0.1 1.2 1 0 0 1 1 1 0 Rhomboid N-terminal domain Pox_A32 PF04665.12 ORF25528 - 0.017 14.6 0.0 0.019 14.4 0.0 1.0 1 0 0 1 1 1 0 Poxvirus A32 protein Pkr1 PF08636.10 ORF25023 - 0.28 11.3 6.2 0.082 13.1 3.2 1.6 2 0 0 2 2 2 0 ER protein Pkr1 RNR_N PF08343.10 ORF24288 - 0.0089 16.0 0.5 0.014 15.5 0.5 1.3 1 0 0 1 1 1 1 Ribonucleotide reductase N-terminal SAS4 PF15460.6 ORF24288 - 0.09 12.9 2.4 0.49 10.5 0.8 2.0 1 1 1 2 2 2 0 Something about silencing, SAS, complex subunit 4 GCS2 PF04107.13 ORF23209 - 0.15 11.4 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) Es2 PF09751.9 ORF23096 - 3.1 7.4 8.9 3.2 7.4 8.9 1.0 1 0 0 1 1 1 0 Nuclear protein Es2 PARP_regulatory PF01358.18 ORF22945 - 0.0034 16.4 0.8 0.0036 16.3 0.8 1.1 1 0 0 1 1 1 1 Poly A polymerase regulatory subunit MlaA PF04333.13 ORF22945 - 0.031 14.0 0.1 0.033 13.9 0.1 1.1 1 0 0 1 1 1 0 MlaA lipoprotein Dynein_heavy PF03028.15 ORF22390 - 0.053 13.6 0.1 0.058 13.5 0.1 1.2 1 0 0 1 1 1 0 Dynein heavy chain region D6 P-loop domain Rad50_zn_hook PF04423.14 ORF21322 - 0.0087 15.9 0.1 0.013 15.3 0.1 1.2 1 0 0 1 1 1 1 Rad50 zinc hook motif Prok-RING_4 PF14447.6 ORF21322 - 0.14 12.0 7.9 0.91 9.4 7.9 2.2 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF21322 - 0.19 11.6 7.7 0.61 10.0 7.7 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF21322 - 0.24 11.5 7.7 0.94 9.6 1.6 2.7 2 1 0 2 2 2 0 RING-type zinc-finger Zn-C2H2_12 PF18112.1 ORF21322 - 0.3 11.6 3.5 0.81 10.2 0.5 2.3 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain zf-RING_5 PF14634.6 ORF21322 - 0.47 10.5 8.8 2.1 8.4 8.8 2.0 1 1 0 1 1 1 0 zinc-RING finger domain zf-RING_2 PF13639.6 ORF21322 - 4.4 7.7 13.9 3.9 7.9 10.8 2.1 1 1 1 2 2 2 0 Ring finger domain NuA4 PF09340.10 ORF20592 - 0.03 14.2 0.1 1.7 8.6 0.1 2.1 2 0 0 2 2 2 0 Histone acetyltransferase subunit NuA4 Disulph_isomer PF06491.11 ORF20347 - 0.057 13.5 0.1 0.067 13.3 0.1 1.2 1 0 0 1 1 1 0 Disulphide isomerase TT_ORF2a PF08197.11 ORF18939 - 0.051 13.6 0.4 0.16 12.0 0.1 1.9 1 1 1 2 2 2 0 pORF2a truncated protein Myb_DNA-binding PF00249.31 ORF18253 - 0.018 15.2 0.3 0.028 14.6 0.3 1.3 1 0 0 1 1 1 0 Myb-like DNA-binding domain COG5 PF10392.9 ORF17184 - 0.032 14.4 0.0 0.037 14.2 0.0 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 Mg_chelatase PF01078.21 ORF15722 - 0.014 14.8 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NapD PF03927.13 ORF15235 - 1.1e-26 92.7 1.9 1.2e-26 92.6 1.9 1.0 1 0 0 1 1 1 1 NapD protein Mo-co_dimer PF03404.16 ORF15235 - 0.063 13.3 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Mo-co oxidoreductase dimerisation domain Pox_TAA1 PF03295.14 ORF15235 - 0.095 12.6 0.0 0.26 11.2 0.0 1.6 1 1 1 2 2 2 0 Poxvirus trans-activator protein A1 C-terminal Claudin_2 PF13903.6 ORF14888 - 0.08 12.7 0.0 0.088 12.5 0.0 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction PDZ_2 PF13180.6 ORF1474 - 9.2e-05 22.7 0.0 0.00012 22.4 0.0 1.1 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF1474 - 0.048 14.0 0.0 0.06 13.7 0.0 1.3 1 0 0 1 1 1 0 PDZ domain DUF4435 PF14491.6 ORF14630 - 0.021 14.7 3.1 0.023 14.6 3.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) DASH_Dad1 PF08649.10 ORF14630 - 0.13 12.5 0.9 0.29 11.4 0.9 1.5 1 0 0 1 1 1 0 DASH complex subunit Dad1 Borrelia_rep PF03183.13 ORF13449 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 1 1 3 3 3 1 Borrelia repeat protein DUF5533 PF17685.1 ORF13449 - 0.28 11.6 7.6 0.41 11.0 7.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5533) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks277.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks277.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks277.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks277.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5466 PF17554.2 ORF12236 - 0.12 12.6 1.4 0.18 12.0 1.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5466) RseC_MucC PF04246.12 ORF11648 - 8.6 6.3 7.5 9.9 6.1 7.5 1.4 1 1 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Hydrolase_4 PF12146.8 ORF112550 - 7.3e-08 32.0 0.1 8.9e-08 31.7 0.1 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF112550 - 1.1e-06 28.5 0.0 1.3e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 ORF112550 - 0.0001 22.0 0.1 0.00011 21.9 0.1 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF112550 - 0.0013 18.3 0.1 0.0014 18.1 0.1 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family PhoPQ_related PF10142.9 ORF112550 - 0.0056 15.4 0.0 0.0056 15.4 0.0 1.0 1 0 0 1 1 1 1 PhoPQ-activated pathogenicity-related protein Abhydrolase_2 PF02230.16 ORF112550 - 0.0062 16.4 0.1 0.0076 16.1 0.1 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 ORF112550 - 0.023 14.8 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 TAP-like protein FSH1 PF03959.13 ORF112550 - 0.03 14.0 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Peptidase_S15 PF02129.18 ORF112550 - 0.15 11.6 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Motile_Sperm PF00635.26 ORF112055 - 0.044 13.6 0.2 0.056 13.3 0.2 1.2 1 0 0 1 1 1 0 MSP (Major sperm protein) domain CTX_RstB PF07459.11 ORF111740 - 0.063 13.5 0.2 0.18 12.1 0.1 1.7 2 0 0 2 2 2 0 CTX phage RstB protein RAP1 PF07218.11 ORF111740 - 4.4 5.5 4.3 4.6 5.4 4.3 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF4477 PF14780.6 ORF111604 - 0.0061 16.2 2.1 0.0063 16.2 2.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4477) VTC PF09359.10 ORF111604 - 0.09 12.2 0.1 0.099 12.0 0.1 1.1 1 0 0 1 1 1 0 VTC domain Annexin_like PF18411.1 ORF111476 - 0.031 14.5 0.1 0.033 14.4 0.1 1.2 1 0 0 1 1 1 0 Annexin-like domain DUF3251 PF11622.8 ORF111042 - 0.011 15.4 0.2 0.012 15.2 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3251) Lzipper-MIP1 PF14389.6 ORF111042 - 0.049 13.9 3.7 3.6 7.9 0.1 2.1 1 1 1 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 GLE1 PF07817.13 ORF111042 - 0.064 12.4 1.5 0.073 12.3 1.5 1.1 1 0 0 1 1 1 0 GLE1-like protein RACo_linker PF17650.1 ORF111042 - 0.11 12.4 0.1 1.3 8.9 0.0 2.0 2 0 0 2 2 2 0 RACo linker region Borrelia_rep PF03183.13 ORF110798 - 0.0032 17.3 4.7 0.0032 17.3 4.7 2.8 2 1 1 3 3 3 1 Borrelia repeat protein DUF5533 PF17685.1 ORF110798 - 0.28 11.6 7.6 0.41 11.0 7.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5533) DUF5090 PF17009.5 ORF110496 - 0.18 11.8 8.4 0.19 11.7 8.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) LmjF365940-deam PF14421.6 ORF109987 - 0.13 11.8 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases Glycoprot_B_PH2 PF17417.2 ORF109914 - 0.31 11.4 2.2 16 5.9 0.1 2.0 1 1 1 2 2 2 0 Herpesvirus Glycoprotein B PH-like domain Glyco_transf_4 PF13439.6 ORF109542 - 0.0047 16.9 0.0 0.005 16.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase Family 4 DUF5389 PF17364.2 ORF109357 - 0.016 15.3 0.3 0.019 15.0 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5389) Phage_head_fibr PF11133.8 ORF10923 - 0.11 11.9 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 Head fiber protein Spermine_synt_N PF17284.2 ORF109178 - 0.11 12.5 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Spermidine synthase tetramerisation domain HDC PF02329.16 ORF10862 - 0.037 13.0 0.0 0.044 12.8 0.0 1.1 1 0 0 1 1 1 0 Histidine carboxylase PI chain DUF2501 PF10696.9 ORF108441 - 0.048 13.9 0.8 0.076 13.3 0.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2501) Hydrolase_4 PF12146.8 ORF108328 - 7.3e-08 32.0 0.1 8.9e-08 31.7 0.1 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF108328 - 1.1e-06 28.5 0.0 1.3e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 ORF108328 - 0.0001 22.0 0.1 0.00011 21.9 0.1 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF108328 - 0.0013 18.3 0.1 0.0014 18.1 0.1 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family PhoPQ_related PF10142.9 ORF108328 - 0.0056 15.4 0.0 0.0056 15.4 0.0 1.0 1 0 0 1 1 1 1 PhoPQ-activated pathogenicity-related protein Abhydrolase_2 PF02230.16 ORF108328 - 0.0062 16.4 0.1 0.0076 16.1 0.1 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 ORF108328 - 0.023 14.8 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 TAP-like protein FSH1 PF03959.13 ORF108328 - 0.03 14.0 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Peptidase_S15 PF02129.18 ORF108328 - 0.15 11.6 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) MORN PF02493.20 ORF108084 - 2.7e-14 52.1 24.4 1.7e-06 27.6 0.7 4.1 4 0 0 4 4 4 4 MORN repeat CHCH PF06747.13 ORF107964 - 0.00048 20.2 10.4 0.00066 19.7 10.4 1.2 1 0 0 1 1 1 1 CHCH domain SRCR PF00530.18 ORF107964 - 0.0021 18.5 0.7 0.0023 18.4 0.7 1.1 1 0 0 1 1 1 1 Scavenger receptor cysteine-rich domain Cmc1 PF08583.10 ORF107964 - 0.02 14.9 4.6 0.56 10.3 0.5 2.1 1 1 1 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like DmsC PF04976.12 ORF107894 - 0.043 13.3 0.0 0.051 13.1 0.0 1.0 1 0 0 1 1 1 0 DMSO reductase anchor subunit (DmsC) TerD PF02342.18 ORF107885 - 0.15 11.6 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 TerD domain Dynein_light PF01221.18 ORF107337 - 8.2e-26 90.2 2.1 8.9e-26 90.0 2.1 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 QIL1 PF15884.5 ORF107337 - 0.009 16.6 0.1 0.013 16.1 0.1 1.2 1 0 0 1 1 1 1 MICOS complex subunit MIC13, QIL1 DUF5314 PF17241.2 ORF107337 - 0.035 13.8 0.6 0.04 13.6 0.6 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5314) Rif1_N PF12231.8 ORF107337 - 0.062 12.3 0.1 0.062 12.3 0.1 1.0 1 0 0 1 1 1 0 Rap1-interacting factor 1 N terminal Pannexin_like PF12534.8 ORF107156 - 0.049 12.7 1.0 0.055 12.5 1.0 1.0 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 DUF2219 PF09982.9 ORF107156 - 0.085 12.1 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2219) Cytochrom_C1 PF02167.15 ORF107156 - 0.18 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C1 family EF-hand_1 PF00036.32 ORF106650 - 1.2e-12 46.4 1.6 3.1e-07 29.5 0.9 2.3 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF106650 - 2.2e-11 42.7 1.6 4.4e-06 26.0 1.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF106650 - 2.9e-10 40.4 0.1 3.5e-10 40.2 0.1 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF106650 - 1.4e-09 37.1 1.5 0.00017 21.3 0.6 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF106650 - 1.4e-08 34.4 0.3 4.2e-06 26.5 0.1 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF106650 - 0.0071 16.2 0.7 1.6 8.7 0.1 2.2 2 0 0 2 2 2 2 EF hand EF-hand_9 PF14658.6 ORF106650 - 0.048 14.0 0.0 0.061 13.7 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain SWIRM PF04433.17 ORF106351 - 0.02 15.2 1.4 0.024 15.0 1.4 1.2 1 0 0 1 1 1 0 SWIRM domain Citrate_synt PF00285.21 ORF106179 - 8.2e-25 87.6 0.1 9e-25 87.5 0.1 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain RNA_pol_Rpb1_2 PF00623.20 ORF106179 - 0.099 12.9 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 2 Amidase PF01425.21 ORF106041 - 1.8e-05 23.9 0.0 2.1e-05 23.7 0.0 1.0 1 0 0 1 1 1 1 Amidase 2TM PF13239.6 ORF106020 - 2.1 8.7 7.5 3 8.2 7.5 1.3 1 0 0 1 1 1 0 2TM domain DUF4520 PF15016.6 ORF105947 - 0.021 14.9 0.1 0.035 14.2 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4520) Phage_Gp23 PF10669.9 ORF105930 - 1.5 9.2 3.3 0.5 10.7 0.8 1.5 2 0 0 2 2 2 0 Protein gp23 (Bacteriophage A118) DUF2681 PF10883.8 ORF105745 - 0.37 11.2 5.0 0.55 10.7 4.7 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2681) Ribosomal_TL5_C PF14693.6 ORF105463 - 0.022 15.1 0.0 0.023 15.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein TL5, C-terminal domain BT1 PF03092.16 ORF105144 - 0.064 11.5 0.4 0.069 11.4 0.4 1.0 1 0 0 1 1 1 0 BT1 family Sec8_exocyst PF04048.14 ORF104729 - 0.036 14.0 0.3 6 6.8 0.0 2.0 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain PYRIN PF02758.16 ORF104729 - 0.057 13.6 0.0 0.077 13.2 0.0 1.1 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain NOGCT PF08155.11 ORF104400 - 5.7e-05 23.0 0.9 0.00013 21.9 0.9 1.6 1 0 0 1 1 1 1 NOGCT (NUC087) domain MqsA_antitoxin PF15731.5 ORF104104 - 4.1e-36 124.0 0.1 4.4e-36 123.9 0.1 1.0 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_3 PF01381.22 ORF104104 - 0.00032 20.7 0.0 0.00047 20.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 ORF104104 - 0.0066 16.8 0.0 0.0081 16.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Tn916-Xis PF09035.10 ORF104104 - 0.039 14.2 0.0 0.055 13.7 0.0 1.2 1 0 0 1 1 1 0 Excisionase from transposon Tn916 zf-C2HC_2 PF13913.6 ORF103611 - 0.19 11.7 0.0 0.31 11.0 0.0 1.3 1 0 0 1 1 1 0 zinc-finger of a C2HC-type Ribosomal_S17 PF00366.20 ORF103286 - 5.1e-08 32.9 0.0 6.2e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_L33 PF00471.20 ORF102846 - 0.012 16.0 1.1 0.38 11.2 0.2 2.1 2 0 0 2 2 2 0 Ribosomal protein L33 NADH_u_ox_C PF12853.7 ORF10245 - 0.2 11.7 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit Thionin PF00321.17 ORF102037 - 0.026 15.0 2.9 0.044 14.3 2.9 1.4 1 0 0 1 1 1 0 Plant thionin Reo_sigmaC PF04582.12 ORF101385 - 0.018 15.3 0.0 0.019 15.2 0.0 1.1 1 0 0 1 1 1 0 Reovirus sigma C capsid protein C-terminal domain DUF1358 PF07096.11 ORF101382 - 0.031 14.2 0.0 0.035 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) Trns_repr_metal PF02583.17 ORF101334 - 0.037 14.4 0.2 0.042 14.2 0.2 1.2 1 0 0 1 1 1 0 Metal-sensitive transcriptional repressor Acid_PPase PF12689.7 ORF100313 - 1.7e-22 80.1 0.0 1.9e-22 79.9 0.0 1.0 1 0 0 1 1 1 1 Acid Phosphatase PdxJ PF03740.13 ORF100313 - 0.11 11.6 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthesis protein PdxJ Trns_repr_metal PF02583.17 ORF100199 - 0.01 16.2 0.2 0.046 14.1 0.0 2.0 2 1 0 2 2 2 0 Metal-sensitive transcriptional repressor DUF3781 PF12636.7 NODE_63355_length_256_cov_0.995475_g55414_i0reverse_frame_1 - 0.014 15.3 1.6 0.02 14.7 1.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3781) DcpS_C PF11969.8 NODE_63353_length_256_cov_1.067873_g55412_i0reverse_frame_1 - 0.027 14.9 1.4 0.036 14.6 1.4 1.2 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme C-term binding DUF4199 PF13858.6 NODE_63346_length_256_cov_1.085973_g55405_i0forward_frame_1 - 0.021 15.2 4.9 0.032 14.6 4.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) PhoLip_ATPase_C PF16212.5 NODE_63346_length_256_cov_1.085973_g55405_i0forward_frame_1 - 0.05 13.4 4.8 0.054 13.2 4.8 1.0 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Spo7 PF03907.13 NODE_63346_length_256_cov_1.085973_g55405_i0forward_frame_1 - 0.12 11.8 0.5 0.14 11.6 0.5 1.1 1 0 0 1 1 1 0 Spo7-like protein DUF5373 PF17343.2 NODE_63346_length_256_cov_1.085973_g55405_i0forward_frame_1 - 0.21 11.4 3.2 0.22 11.4 3.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5373) EbsA PF17255.2 NODE_63334_length_256_cov_1.298643_g55393_i0reverse_frame_1 - 0.012 16.0 0.2 0.013 15.9 0.2 1.1 1 0 0 1 1 1 0 EbsA-like protein Syntaxin_2 PF14523.6 NODE_63334_length_256_cov_1.298643_g55393_i0reverse_frame_1 - 0.018 15.4 0.8 0.021 15.2 0.8 1.1 1 0 0 1 1 1 0 Syntaxin-like protein Streptin-Immun PF11083.8 NODE_63334_length_256_cov_1.298643_g55393_i0reverse_frame_1 - 0.036 14.5 1.7 0.046 14.1 1.7 1.1 1 0 0 1 1 1 0 Lantibiotic streptin immunity protein SWIRM-assoc_2 PF16496.5 NODE_63329_length_256_cov_1.375566_g55388_i0reverse_frame_1 - 1.1 8.0 4.0 1.2 7.9 4.0 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal Shigella_OspC PF06128.11 NODE_63328_length_256_cov_1.380090_g55387_i0reverse_frame_1 - 0.01 15.6 0.5 0.012 15.4 0.5 1.1 1 0 0 1 1 1 0 Shigella flexneri OspC protein FA_FANCE PF11510.8 NODE_63321_length_256_cov_1.438914_g55380_i0forward_frame_1 - 0.043 13.2 0.0 0.049 13.0 0.0 1.0 1 0 0 1 1 1 0 Fanconi Anaemia group E protein FANCE DUF2606 PF10794.9 NODE_63316_length_256_cov_1.538462_g55375_i0reverse_frame_1 - 0.18 11.6 0.5 0.21 11.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) Oxidored_q4 PF00507.19 NODE_63309_length_256_cov_1.628959_g55368_i0reverse_frame_1 - 0.0038 17.3 0.2 0.004 17.3 0.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Myc_target_1 PF15179.6 NODE_63309_length_256_cov_1.628959_g55368_i0reverse_frame_1 - 0.0086 16.0 0.1 0.01 15.8 0.1 1.1 1 0 0 1 1 1 1 Myc target protein 1 zf-CGNR PF11706.8 NODE_63297_length_256_cov_1.977376_g55356_i0reverse_frame_1 - 0.06 13.2 2.2 5 7.1 0.5 2.4 2 1 0 2 2 2 0 CGNR zinc finger zf-nanos PF05741.13 NODE_63297_length_256_cov_1.977376_g55356_i0reverse_frame_1 - 0.086 13.1 0.2 11 6.3 0.2 2.5 2 1 0 2 2 2 0 Nanos RNA binding domain DUF1317 PF07026.11 NODE_63297_length_256_cov_1.977376_g55356_i0forward_frame_1 - 0.051 13.4 0.0 9.8 6.1 0.0 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1317) HicB PF05534.12 NODE_63286_length_256_cov_2.230769_g55345_i0reverse_frame_1 - 0.09 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 HicB family DUF898 PF05987.13 NODE_63284_length_256_cov_2.262443_g55343_i0reverse_frame_1 - 7.1e-17 61.5 0.4 7.1e-17 61.5 0.4 1.4 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF898) Lambda_Bor PF06291.11 NODE_63284_length_256_cov_2.262443_g55343_i0reverse_frame_1 - 0.0014 18.6 0.9 0.013 15.5 0.4 2.0 2 0 0 2 2 2 1 Bor protein DUF4234 PF14018.6 NODE_63284_length_256_cov_2.262443_g55343_i0reverse_frame_1 - 0.0074 16.4 1.4 0.0074 16.4 1.4 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4234) Metallophos PF00149.28 NODE_63283_length_256_cov_2.271493_g55342_i0forward_frame_1 - 6.1e-07 30.1 0.1 7.2e-07 29.9 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase SlyX PF04102.12 NODE_63280_length_256_cov_2.303167_g55339_i0reverse_frame_1 - 0.00083 19.9 0.6 0.0011 19.5 0.6 1.2 1 0 0 1 1 1 1 SlyX DivIC PF04977.15 NODE_63280_length_256_cov_2.303167_g55339_i0reverse_frame_1 - 0.007 16.1 0.4 0.0094 15.7 0.4 1.2 1 0 0 1 1 1 1 Septum formation initiator DUF1481 PF07356.12 NODE_63279_length_256_cov_2.339367_g55338_i0reverse_frame_1 - 0.077 12.8 0.0 0.092 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1481) Drc1-Sld2 PF11719.8 NODE_63271_length_256_cov_2.506787_g55330_i0forward_frame_1 - 9.6 5.6 6.5 11 5.5 6.5 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein Mqo PF06039.15 NODE_63256_length_256_cov_3.542986_g55315_i0forward_frame_1 - 2.4e-29 102.2 0.1 2.6e-29 102.1 0.1 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) FAD_binding_3 PF01494.19 NODE_63256_length_256_cov_3.542986_g55315_i0forward_frame_1 - 0.0068 15.7 0.0 0.0075 15.6 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain DUF1685 PF07939.11 NODE_63250_length_256_cov_4.104072_g55309_i0reverse_frame_1 - 0.056 13.2 0.0 0.097 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) Pep3_Vps18 PF05131.14 NODE_63243_length_256_cov_7.085973_g55302_i0forward_frame_1 - 0.09 12.6 0.1 0.099 12.5 0.1 1.1 1 0 0 1 1 1 0 Pep3/Vps18/deep orange family DUF3909 PF13077.6 NODE_63240_length_256_cov_32.248869_g55299_i0reverse_frame_1 - 0.074 13.2 0.1 0.086 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3909) Choline_kin_N PF04428.14 NODE_63232_length_256_cov_45.692308_g55291_i0forward_frame_1 - 0.072 12.8 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Choline kinase N terminus zf-UBP PF02148.19 NODE_63225_length_256_cov_59.108597_g55284_i0reverse_frame_1 - 1.4e-10 41.4 0.3 1.4e-10 41.4 0.3 1.5 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein DUF4132 PF13569.6 NODE_63225_length_256_cov_59.108597_g55284_i0reverse_frame_1 - 0.004 17.0 0.0 0.0041 16.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4132) zinc_ribbon_9 PF14369.6 NODE_63225_length_256_cov_59.108597_g55284_i0reverse_frame_1 - 0.008 16.4 0.9 0.008 16.4 0.9 1.5 2 0 0 2 2 2 1 zinc-ribbon Allexi_40kDa PF05549.11 NODE_63219_length_256_cov_73.113122_g55278_i0forward_frame_1 - 0.037 13.5 0.1 0.044 13.3 0.1 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein Sec63 PF02889.16 NODE_63218_length_256_cov_75.764706_g55277_i0reverse_frame_1 - 2.1e-19 69.7 0.0 2.4e-19 69.5 0.0 1.0 1 0 0 1 1 1 1 Sec63 Brl domain DUF3418 PF11898.8 NODE_63218_length_256_cov_75.764706_g55277_i0forward_frame_1 - 0.18 10.4 0.0 0.18 10.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) CRR7 PF12095.8 NODE_63210_length_256_cov_101.443439_g55269_i0forward_frame_1 - 0.011 16.2 0.0 0.012 16.0 0.0 1.1 1 0 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 RabGAP-TBC PF00566.18 NODE_63201_length_256_cov_126.909502_g55260_i0forward_frame_1 - 0.1 12.2 1.9 0.11 12.1 1.9 1.0 1 0 0 1 1 1 0 Rab-GTPase-TBC domain DUF5553 PF17707.1 NODE_63196_length_256_cov_142.515837_g55255_i0reverse_frame_1 - 0.022 14.2 0.6 0.026 14.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5553) DUF1676 PF07898.13 NODE_63189_length_256_cov_323.628959_g55248_i0forward_frame_1 - 4 7.5 8.7 4 7.4 8.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) EamA PF00892.20 NODE_63182_length_257_cov_0.936937_g55241_i0forward_frame_1 - 5.5e-05 23.4 1.3 6.4e-05 23.1 1.3 1.1 1 0 0 1 1 1 1 EamA-like transporter family RcpC PF16976.5 NODE_63180_length_257_cov_0.977477_g55239_i0reverse_frame_1 - 0.065 13.3 0.7 0.072 13.1 0.7 1.1 1 0 0 1 1 1 0 Flp pilus assembly protein RcpC/CpaB TAF8_C PF10406.9 NODE_63179_length_257_cov_1.004505_g55238_i0reverse_frame_1 - 2.5 8.7 4.7 9.9 6.8 2.4 2.2 1 1 1 2 2 2 0 Transcription factor TFIID complex subunit 8 C-term Shugoshin_N PF07558.11 NODE_63176_length_257_cov_1.072072_g55235_i0reverse_frame_1 - 0.027 14.3 1.1 9.6 6.2 0.1 2.7 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region YabA PF06156.13 NODE_63176_length_257_cov_1.072072_g55235_i0reverse_frame_1 - 0.37 11.4 3.6 11 6.8 3.6 2.4 1 1 0 1 1 1 0 Initiation control protein YabA C4 PF01413.19 NODE_63168_length_257_cov_1.126126_g55227_i0reverse_frame_1 - 0.00027 21.3 0.0 0.00033 21.0 0.0 1.1 1 0 0 1 1 1 1 C-terminal tandem repeated domain in type 4 procollagen Post_transc_reg PF13797.6 NODE_63164_length_257_cov_1.279279_g55223_i0forward_frame_1 - 0.023 14.6 0.0 0.039 13.8 0.0 1.4 1 0 0 1 1 1 0 Post-transcriptional regulator DUF1233 PF06806.12 NODE_63162_length_257_cov_1.337838_g55221_i0reverse_frame_1 - 0.013 15.1 0.1 0.016 14.8 0.1 1.1 1 0 0 1 1 1 0 Putative excisionase (DUF1233) Lar_restr_allev PF14354.6 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 6.8e-05 23.2 1.0 8.8e-05 22.8 1.0 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar TFIIS_C PF01096.18 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 8e-05 22.4 1.7 0.00015 21.6 1.7 1.4 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) zf-Dof PF02701.15 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 0.016 15.4 0.7 0.025 14.7 0.7 1.3 1 0 0 1 1 1 0 Dof domain, zinc finger DUF3268 PF11672.8 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 0.053 13.8 0.7 0.068 13.5 0.7 1.1 1 0 0 1 1 1 0 zinc-finger-containing domain Ogr_Delta PF04606.12 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 0.074 13.0 3.7 0.24 11.4 3.7 1.8 1 1 0 1 1 1 0 Ogr/Delta-like zinc finger GerPB PF10803.8 NODE_63148_length_257_cov_1.531532_g55207_i0reverse_frame_1 - 0.067 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Spore germination GerPB FAM209 PF15206.6 NODE_63142_length_257_cov_1.617117_g55201_i0forward_frame_1 - 0.09 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 FAM209 family Spt20 PF12090.8 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.0017 18.0 4.3 0.0018 18.0 4.3 1.1 1 0 0 1 1 1 1 Spt20 family CbtA PF09490.10 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.0031 17.3 1.1 0.0035 17.1 1.1 1.0 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtA) Connexin PF00029.19 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.013 15.3 4.3 0.013 15.2 4.3 1.0 1 0 0 1 1 1 0 Connexin CSG2 PF16965.5 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.018 14.0 0.4 0.019 13.9 0.4 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator Pex14_N PF04695.13 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.028 15.1 2.5 0.034 14.8 2.5 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3675 PF12428.8 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.029 14.9 1.3 0.034 14.7 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) Orf78 PF06024.12 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.077 13.3 5.6 0.25 11.7 5.6 1.7 1 1 0 1 1 1 0 Orf78 (ac78) BatD PF13584.6 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.081 11.7 0.0 0.096 11.5 0.0 1.0 1 0 0 1 1 1 0 Oxygen tolerance Ctr PF04145.15 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.095 13.3 3.4 0.11 13.1 3.4 1.1 1 0 0 1 1 1 0 Ctr copper transporter family DUF4366 PF14283.6 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.096 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) DUF4407 PF14362.6 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.14 11.5 1.0 0.17 11.2 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) OATP PF03137.20 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.17 10.2 0.3 0.18 10.1 0.3 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Zip PF02535.22 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.22 10.7 8.1 0.26 10.5 8.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter CLN3 PF02487.17 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.35 9.9 3.3 0.37 9.8 3.3 1.0 1 0 0 1 1 1 0 CLN3 protein FAM76 PF16046.5 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.45 9.8 11.2 0.48 9.7 11.2 1.0 1 0 0 1 1 1 0 FAM76 protein SelP_N PF04592.14 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.96 8.8 26.8 1.1 8.6 26.8 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Endostatin PF06482.11 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 2.4 7.5 8.8 2.5 7.5 8.8 1.0 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin CAF20 PF17052.5 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 4.6 7.4 12.3 5.5 7.1 12.3 1.1 1 0 0 1 1 1 0 Cap associated factor DUF2956 PF11169.8 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 8.1 6.7 13.0 53 4.1 13.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2956) Tlr3_TMD PF17968.1 NODE_63134_length_257_cov_1.738739_g55193_i0reverse_frame_1 - 2.1 8.6 6.6 0.54 10.5 3.1 1.8 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain DUF1077 PF06417.12 NODE_63130_length_257_cov_1.792793_g55189_i0reverse_frame_1 - 0.061 13.3 0.1 0.15 12.1 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1077) p450 PF00067.22 NODE_63130_length_257_cov_1.792793_g55189_i0forward_frame_1 - 0.00021 20.2 0.0 0.00023 20.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Ndc1_Nup PF09531.10 NODE_63129_length_257_cov_1.819820_g55188_i0reverse_frame_1 - 0.34 9.5 5.5 0.41 9.3 5.5 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup ERGIC_N PF13850.6 NODE_63127_length_257_cov_1.828829_g55186_i0reverse_frame_1 - 0.1 12.9 0.2 0.12 12.7 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Vps8 PF12816.7 NODE_63127_length_257_cov_1.828829_g55186_i0forward_frame_1 - 0.00069 19.2 0.1 0.00072 19.1 0.1 1.1 1 0 0 1 1 1 1 Golgi CORVET complex core vacuolar protein 8 DUF3524 PF12038.8 NODE_63121_length_257_cov_1.950450_g55180_i0forward_frame_1 - 0.11 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) MFS_1 PF07690.16 NODE_63120_length_257_cov_1.977477_g55179_i0forward_frame_1 - 6.6e-08 31.9 3.4 6.6e-08 31.9 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_63120_length_257_cov_1.977477_g55179_i0forward_frame_1 - 0.0097 14.8 4.0 0.01 14.7 4.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter FANCL_C PF11793.8 NODE_63111_length_257_cov_2.139640_g55170_i0reverse_frame_1 - 0.11 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 FANCL C-terminal domain nlz1 PF12402.8 NODE_63109_length_257_cov_2.166667_g55168_i0forward_frame_1 - 0.1 13.0 0.1 0.16 12.4 0.1 1.3 1 0 0 1 1 1 0 NocA-like zinc-finger protein 1 Kazal_1 PF00050.21 NODE_63101_length_257_cov_2.297297_g55160_i0forward_frame_1 - 0.031 14.3 0.7 0.053 13.5 0.7 1.4 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain Ring_hydroxyl_A PF00848.19 NODE_63098_length_257_cov_2.432432_g55157_i0forward_frame_1 - 1.8e-11 44.4 0.4 1.8e-11 44.4 0.4 1.1 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) PAS_9 PF13426.7 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 1.7e-11 44.2 0.0 2.1e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 5.9e-10 39.1 0.0 6.4e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 1.4e-05 25.0 0.0 1.7e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 PAS domain PAS_3 PF08447.12 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 0.00012 22.3 0.0 0.00015 21.9 0.0 1.2 1 0 0 1 1 1 1 PAS fold PAS_10 PF13596.6 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 0.0019 18.8 0.0 0.0022 18.6 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 0.034 14.4 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 PAS fold DUF3979 PF13141.6 NODE_63078_length_257_cov_3.585586_g55137_i0reverse_frame_1 - 0.092 13.0 0.6 0.11 12.8 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) T3SSipB PF16535.5 NODE_63077_length_257_cov_3.603604_g55136_i0forward_frame_1 - 0.0023 18.4 0.1 0.0028 18.1 0.1 1.0 1 0 0 1 1 1 1 Type III cell invasion protein SipB PRCC PF10253.9 NODE_63077_length_257_cov_3.603604_g55136_i0forward_frame_1 - 0.025 15.4 1.0 0.026 15.3 1.0 1.1 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting DUF2520 PF10728.9 NODE_63077_length_257_cov_3.603604_g55136_i0forward_frame_1 - 0.091 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2520) Phage_holin_2_1 PF04971.12 NODE_63074_length_257_cov_4.265766_g55133_i0forward_frame_1 - 0.0015 18.5 0.7 0.0023 17.9 0.7 1.3 1 0 0 1 1 1 1 Bacteriophage P21 holin S TMIE PF16038.5 NODE_63066_length_257_cov_29.563063_g55125_i0reverse_frame_1 - 0.074 12.9 0.3 0.11 12.4 0.3 1.4 1 1 0 1 1 1 0 TMIE protein DUF1003 PF06210.11 NODE_63058_length_257_cov_56.360360_g55117_i0forward_frame_1 - 9.6 6.4 7.4 11 6.2 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) CobT PF06213.12 NODE_63054_length_257_cov_59.914414_g55113_i0forward_frame_1 - 7.4 5.9 17.3 8.2 5.7 17.3 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT zf-rbx1 PF12678.7 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 5e-12 45.9 0.3 5e-12 45.9 0.3 1.6 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 4.4e-10 39.7 0.4 7.3e-10 39.0 0.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 3e-08 33.4 0.6 3e-08 33.4 0.6 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 9.9e-07 28.5 0.3 9.9e-07 28.5 0.3 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 4.8e-06 26.5 0.6 4.8e-06 26.5 0.6 1.8 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 5.8e-06 26.2 0.2 5.8e-06 26.2 0.2 1.6 2 0 0 2 2 2 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 1.9e-05 24.6 0.1 2.4e-05 24.3 0.1 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 2.6e-05 24.3 1.7 4.8e-05 23.4 0.3 1.9 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 7.1e-05 22.6 0.2 0.00012 21.8 0.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 9.5e-05 22.1 0.3 0.00019 21.1 0.3 1.5 1 0 0 1 1 1 1 RING-like zinc finger Prok-RING_4 PF14447.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.00014 21.7 0.2 0.00025 20.8 0.2 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.00029 20.4 0.3 0.00044 19.8 0.3 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.0037 17.4 0.2 0.0057 16.8 0.2 1.4 1 0 0 1 1 1 1 FANCL C-terminal domain zf-Nse PF11789.8 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.0074 16.1 0.1 0.011 15.5 0.1 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zinc_ribbon_16 PF17034.5 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.015 15.5 0.0 0.017 15.3 0.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon like family RINGv PF12906.7 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.023 14.8 1.4 0.024 14.8 0.5 1.6 2 0 0 2 2 1 0 RING-variant domain U-box PF04564.15 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.025 14.8 0.0 0.056 13.6 0.0 1.7 1 1 0 1 1 1 0 U-box domain zf-RING_10 PF16685.5 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.035 14.2 0.6 0.047 13.8 0.6 1.1 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-RING-like PF08746.11 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.14 12.5 1.0 0.14 12.5 1.0 1.5 2 0 0 2 2 1 0 RING-like domain Neurensin PF14927.6 NODE_63049_length_257_cov_62.590090_g55108_i0reverse_frame_1 - 0.037 13.7 1.4 0.058 13.1 1.4 1.5 1 1 0 1 1 1 0 Neurensin Pico_P1A PF02226.16 NODE_63048_length_257_cov_66.657658_g55107_i0forward_frame_1 - 0.14 12.2 0.8 0.23 11.5 0.8 1.4 1 0 0 1 1 1 0 Picornavirus coat protein (VP4) DUF4399 PF14347.6 NODE_63045_length_257_cov_75.067568_g55104_i0reverse_frame_1 - 0.1 13.0 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4399) pKID PF02173.17 NODE_63045_length_257_cov_75.067568_g55104_i0forward_frame_1 - 0.14 11.6 0.1 0.23 10.9 0.1 1.4 1 0 0 1 1 1 0 pKID domain TB PF00683.17 NODE_63035_length_257_cov_93.468468_g55094_i0forward_frame_1 - 5.6 6.8 13.0 1.9 8.3 8.7 2.1 1 1 1 2 2 2 0 TB domain SpoU_methylas_C PF12105.8 NODE_63034_length_257_cov_94.148649_g55093_i0reverse_frame_1 - 0.08 12.6 0.0 5.7 6.7 0.0 2.1 2 0 0 2 2 2 0 SpoU, rRNA methylase, C-terminal Glycos_transf_2 PF00535.26 NODE_63031_length_257_cov_100.481982_g55090_i0forward_frame_1 - 0.016 15.0 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF872 PF05915.12 NODE_63024_length_257_cov_119.247748_g55083_i0forward_frame_1 - 0.055 13.6 0.0 0.061 13.5 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Spore_YunB PF09560.10 NODE_63019_length_257_cov_165.333333_g55078_i0forward_frame_1 - 0.0062 16.5 0.4 0.0071 16.3 0.4 1.1 1 0 0 1 1 1 1 Sporulation protein YunB (Spo_YunB) Apocytochr_F_N PF16639.5 NODE_63014_length_257_cov_4398.846847_g55073_i0forward_frame_1 - 4.4e-17 62.8 0.0 5.2e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 Apocytochrome F, N-terminal CA_like PF10563.9 NODE_63011_length_257_cov_13470.873874_g55070_i0forward_frame_1 - 0.037 14.0 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 Putative carbonic anhydrase DUF3772 PF12607.8 NODE_63002_length_258_cov_1.076233_g55061_i0reverse_frame_1 - 0.036 13.8 0.5 0.065 13.0 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) DUF2071 PF09844.9 NODE_63001_length_258_cov_1.107623_g55060_i0reverse_frame_1 - 0.067 12.8 0.2 0.067 12.8 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (COG2071) CP2 PF04516.15 NODE_63001_length_258_cov_1.107623_g55060_i0reverse_frame_1 - 0.21 10.8 0.3 0.28 10.5 0.3 1.1 1 0 0 1 1 1 0 CP2 transcription factor DUF1240 PF06836.12 NODE_63001_length_258_cov_1.107623_g55060_i0forward_frame_1 - 0.043 14.4 0.0 0.048 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1240) DUF2721 PF11026.8 NODE_62984_length_258_cov_1.452915_g55043_i0forward_frame_1 - 0.65 9.9 7.3 1.1 9.2 7.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) EF-hand_1 PF00036.32 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 5.7e-06 25.5 0.3 0.00034 20.0 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.00028 21.3 1.1 0.064 13.7 0.4 1.9 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.0044 16.8 0.0 0.021 14.7 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain DUF2610 PF11020.8 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.056 13.3 0.0 4.8 7.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2610) EF-hand_8 PF13833.6 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.082 12.8 0.5 0.27 11.1 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_5 PF13202.6 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.089 12.3 1.3 0.094 12.3 0.0 1.7 2 0 0 2 2 2 0 EF hand NifU_N PF01592.16 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.18 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 NifU-like N terminal domain EIN3 PF04873.13 NODE_62975_length_258_cov_1.587444_g55034_i0forward_frame_1 - 0.073 12.4 0.6 0.079 12.2 0.6 1.0 1 0 0 1 1 1 0 Ethylene insensitive 3 zf-C3HC4_5 PF17121.5 NODE_62974_length_258_cov_1.596413_g55033_i0reverse_frame_1 - 0.12 12.3 0.0 0.26 11.2 0.0 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) MepB PF08877.10 NODE_62973_length_258_cov_1.636771_g55032_i0reverse_frame_1 - 0.026 14.2 0.1 0.03 14.0 0.1 1.1 1 0 0 1 1 1 0 MepB protein PolyG_pol PF01518.16 NODE_62966_length_258_cov_1.730942_g55025_i0reverse_frame_1 - 0.098 11.3 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Sigma NS protein UL16 PF17622.2 NODE_62961_length_258_cov_1.780269_g55020_i0forward_frame_1 - 0.11 12.2 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Viral unique long protein 16 120_Rick_ant PF12574.8 NODE_62954_length_258_cov_1.847534_g55013_i0reverse_frame_1 - 0.061 12.5 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 120 KDa Rickettsia surface antigen Lamprin PF06403.11 NODE_62951_length_258_cov_1.896861_g55010_i0reverse_frame_1 - 1.6 8.7 16.6 0.86 9.6 4.3 2.2 1 1 1 2 2 2 0 Lamprin Spem1 PF15670.5 NODE_62950_length_258_cov_1.937220_g55009_i0forward_frame_1 - 0.2 11.2 0.1 0.27 10.8 0.1 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 Olduvai PF06758.13 NODE_62946_length_258_cov_1.991031_g55005_i0forward_frame_1 - 0.06 13.6 0.1 0.076 13.3 0.1 1.1 1 0 0 1 1 1 0 Olduvai domain hSac2 PF12456.8 NODE_62944_length_258_cov_1.995516_g55003_i0reverse_frame_1 - 0.12 12.0 0.1 0.18 11.5 0.1 1.1 1 0 0 1 1 1 0 Inositol phosphatase Duffy_binding PF05424.11 NODE_62939_length_258_cov_2.080717_g54998_i0reverse_frame_1 - 0.023 14.7 0.4 0.025 14.6 0.4 1.1 1 0 0 1 1 1 0 Duffy binding domain Zf_RING PF16744.5 NODE_62932_length_258_cov_2.197309_g54991_i0forward_frame_1 - 0.18 12.0 3.7 0.55 10.4 1.5 2.0 1 1 1 2 2 2 0 KIAA1045 RING finger OprD PF03573.13 NODE_62927_length_258_cov_2.304933_g54986_i0forward_frame_1 - 0.013 14.6 0.0 0.014 14.5 0.0 1.1 1 0 0 1 1 1 0 outer membrane porin, OprD family CX PF01705.19 NODE_62917_length_258_cov_2.502242_g54976_i0reverse_frame_1 - 0.095 13.3 0.0 0.13 12.8 0.0 1.2 1 0 0 1 1 1 0 CX module Phi29_Phage_SSB PF17427.2 NODE_62910_length_258_cov_2.636771_g54969_i0forward_frame_1 - 0.09 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Phage Single-stranded DNA-binding protein DUF945 PF06097.11 NODE_62909_length_258_cov_2.726457_g54968_i0reverse_frame_1 - 4.3e-17 62.4 0.1 4.4e-17 62.4 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF945) FTP PF07504.13 NODE_62909_length_258_cov_2.726457_g54968_i0reverse_frame_1 - 0.059 13.2 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Fungalysin/Thermolysin Propeptide Motif SH PF01445.17 NODE_62905_length_258_cov_2.869955_g54964_i0reverse_frame_1 - 5.3 7.1 8.4 14 5.7 0.3 2.2 2 0 0 2 2 2 0 Viral small hydrophobic protein DUF1289 PF06945.13 NODE_62902_length_258_cov_2.937220_g54961_i0forward_frame_1 - 1.5e-09 37.5 4.9 2e-09 37.1 4.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1289) DUF5339 PF17274.2 NODE_62897_length_258_cov_3.430493_g54956_i0forward_frame_1 - 0.0069 17.2 0.3 3.7 8.5 0.0 2.1 2 0 0 2 2 2 2 Family of unknown function (DUF5339) DUF1542 PF07564.11 NODE_62897_length_258_cov_3.430493_g54956_i0forward_frame_1 - 0.076 13.1 1.3 1.4 9.0 0.2 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1542) DUF3138 PF11336.8 NODE_62897_length_258_cov_3.430493_g54956_i0forward_frame_1 - 0.14 10.7 0.1 0.16 10.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Anth_synt_I_N PF04715.13 NODE_62894_length_258_cov_3.560538_g54953_i0reverse_frame_1 - 0.16 12.2 0.4 0.21 11.8 0.4 1.2 1 0 0 1 1 1 0 Anthranilate synthase component I, N terminal region NotI PF12183.8 NODE_62893_length_258_cov_3.591928_g54952_i0reverse_frame_1 - 0.17 11.2 1.0 0.17 11.2 1.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease NotI Prominin PF05478.11 NODE_62892_length_258_cov_4.309417_g54951_i0reverse_frame_1 - 0.085 10.8 0.1 0.085 10.8 0.1 1.1 1 0 0 1 1 1 0 Prominin BatA PF07584.11 NODE_62892_length_258_cov_4.309417_g54951_i0forward_frame_1 - 0.093 13.1 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal DUF4534 PF15049.6 NODE_62890_length_258_cov_4.457399_g54949_i0reverse_frame_1 - 0.072 12.8 3.8 0.093 12.5 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4534) DUF3235 PF11574.8 NODE_62885_length_258_cov_41.677130_g54944_i0reverse_frame_1 - 0.13 13.1 0.0 0.16 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3235) DUF5395 PF17373.2 NODE_62885_length_258_cov_41.677130_g54944_i0forward_frame_1 - 0.023 15.3 0.0 0.027 15.1 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5395) MORN PF02493.20 NODE_62878_length_258_cov_52.726457_g54937_i0reverse_frame_1 - 4.5e-06 26.2 3.0 0.00077 19.2 0.2 2.7 3 0 0 3 3 3 2 MORN repeat EXS PF03124.14 NODE_62878_length_258_cov_52.726457_g54937_i0forward_frame_1 - 0.027 13.8 1.5 0.031 13.6 1.5 1.0 1 0 0 1 1 1 0 EXS family U1snRNP70_N PF12220.8 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.011 16.4 6.0 0.46 11.1 6.0 2.0 1 1 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal CCDC-167 PF15188.6 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.052 13.9 0.9 0.075 13.4 0.9 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Coatomer_b_Cpla PF14806.6 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.062 13.3 0.0 0.072 13.1 0.0 1.1 1 0 0 1 1 1 0 Coatomer beta subunit appendage platform RasGAP_C PF03836.15 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.089 12.9 0.3 0.089 12.9 0.3 1.7 2 1 0 2 2 2 0 RasGAP C-terminus DUF460 PF04312.13 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.11 12.2 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF460) Nodulin_late PF07127.11 NODE_62858_length_258_cov_81.000000_g54917_i0reverse_frame_1 - 0.22 11.9 2.9 0.39 11.1 2.9 1.4 1 0 0 1 1 1 0 Late nodulin protein Tetraspanin PF00335.20 NODE_62851_length_258_cov_99.304933_g54910_i0forward_frame_1 - 9.9 5.8 8.8 11 5.6 8.8 1.2 1 0 0 1 1 1 0 Tetraspanin family DMPK_coil PF08826.10 NODE_62846_length_258_cov_112.385650_g54905_i0reverse_frame_1 - 0.065 13.4 10.2 0.2 11.8 10.2 1.9 1 1 0 1 1 1 0 DMPK coiled coil domain like FPP PF05911.11 NODE_62846_length_258_cov_112.385650_g54905_i0reverse_frame_1 - 0.067 11.4 14.1 0.068 11.4 14.1 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil bZIP_2 PF07716.15 NODE_62846_length_258_cov_112.385650_g54905_i0reverse_frame_1 - 1.2 9.3 18.9 0.16 12.1 8.6 2.3 2 0 0 2 2 2 0 Basic region leucine zipper TMEM156 PF15106.6 NODE_62845_length_258_cov_117.887892_g54904_i0reverse_frame_1 - 0.012 15.0 2.0 0.014 14.8 2.0 1.1 1 0 0 1 1 1 0 TMEM156 protein family PEP_mutase PF13714.6 NODE_62840_length_258_cov_141.134529_g54899_i0reverse_frame_1 - 0.041 13.3 0.0 0.045 13.2 0.0 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase RPN2_C PF18004.1 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 0.47 10.4 20.9 0.56 10.1 20.9 1.0 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain LYRIC PF15686.5 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 0.68 9.4 20.4 0.75 9.3 20.4 1.0 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family MRI PF15325.6 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 1 10.5 13.0 0.75 10.9 11.1 1.7 1 1 1 2 2 2 0 Modulator of retrovirus infection DUF4604 PF15377.6 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 1.4 9.4 25.3 1.6 9.1 25.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) Pep1_7 PF17232.2 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 2 8.9 8.4 1.2 9.6 1.6 2.2 2 0 0 2 2 2 0 Elicitor peptide 1-7 DUF3275 PF11679.8 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 7.9 6.4 11.4 9.5 6.1 11.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) DUF3403 PF11883.8 NODE_62834_length_258_cov_897.421525_g54893_i0forward_frame_1 - 0.09 12.9 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3403) EamA PF00892.20 NODE_62830_length_259_cov_0.986607_g54889_i0forward_frame_3 - 3.5e-11 43.4 6.3 3.8e-11 43.3 6.3 1.1 1 0 0 1 1 1 1 EamA-like transporter family PUNUT PF16913.5 NODE_62830_length_259_cov_0.986607_g54889_i0forward_frame_3 - 0.011 14.9 3.9 0.011 14.9 3.9 1.1 1 0 0 1 1 1 0 Purine nucleobase transmembrane transport UAA PF08449.11 NODE_62830_length_259_cov_0.986607_g54889_i0forward_frame_3 - 0.028 13.6 6.1 0.027 13.7 6.1 1.0 1 0 0 1 1 1 0 UAA transporter family Cas9_Topo PF17894.1 NODE_62828_length_259_cov_1.031250_g54887_i0reverse_frame_2 - 0.081 13.0 0.3 0.11 12.6 0.3 1.2 1 0 0 1 1 1 0 Topo homolgy domain in CRISPR-associated endonuclease Cas9 UPF0542 PF15086.6 NODE_62827_length_259_cov_1.062500_g54886_i0reverse_frame_3 - 0.86 9.6 3.4 1.5 8.8 3.4 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks278.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks278.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks278.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks278.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:12:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NTS_2 PF15448.6 NODE_62825_length_259_cov_1.066964_g54884_i0forward_frame_2 - 0.043 14.2 0.5 0.1 13.0 0.5 1.6 1 0 0 1 1 1 0 N-terminal segments of P. falciparum erythrocyte membrane protein zf-C3HC4_4 PF15227.6 NODE_62820_length_259_cov_1.071429_g54879_i0reverse_frame_3 - 0.12 12.5 2.2 12 6.2 1.1 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 NODE_62820_length_259_cov_1.071429_g54879_i0forward_frame_3 - 0.19 12.1 3.0 0.47 10.8 3.0 1.6 1 1 0 1 1 1 0 Ring finger domain RRM_2 PF04059.12 NODE_62819_length_259_cov_1.089286_g54878_i0reverse_frame_3 - 3.6e-11 43.1 0.2 5.6e-11 42.5 0.2 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 UL20 PF17582.2 NODE_62819_length_259_cov_1.089286_g54878_i0forward_frame_2 - 0.68 9.2 5.9 0.7 9.1 5.9 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL20 DUF5009 PF16401.5 NODE_62818_length_259_cov_1.120536_g54877_i0forward_frame_3 - 0.15 11.6 5.2 0.15 11.5 5.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) zf-C2HCIx2C PF10782.9 NODE_62817_length_259_cov_1.129464_g54876_i0reverse_frame_2 - 0.02 14.8 0.4 0.031 14.2 0.4 1.3 1 0 0 1 1 1 0 Zinc-finger Choline_kinase PF01633.20 NODE_62806_length_259_cov_1.352679_g54865_i0reverse_frame_2 - 0.016 14.8 0.6 0.02 14.5 0.2 1.4 1 1 0 1 1 1 0 Choline/ethanolamine kinase Ribosomal_L12_N PF16320.5 NODE_62806_length_259_cov_1.352679_g54865_i0reverse_frame_2 - 0.53 10.0 1.2 1.2 8.9 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain ComR_TPR PF18710.1 NODE_62804_length_259_cov_1.397321_g54863_i0reverse_frame_2 - 0.045 13.3 0.2 0.047 13.2 0.2 1.0 1 0 0 1 1 1 0 ComR tetratricopeptide Pyr_redox_2 PF07992.14 NODE_62802_length_259_cov_1.419643_g54861_i0reverse_frame_2 - 0.025 13.8 0.0 0.027 13.7 0.0 1.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ArgJ PF01960.18 NODE_62801_length_259_cov_1.419643_g54860_i0reverse_frame_3 - 1.4e-15 56.9 0.0 1.6e-15 56.8 0.0 1.0 1 0 0 1 1 1 1 ArgJ family Pardaxin PF07425.11 NODE_62801_length_259_cov_1.419643_g54860_i0reverse_frame_3 - 0.034 13.8 0.5 0.053 13.1 0.5 1.3 1 0 0 1 1 1 0 Pardaxin PhaC_N PF07167.13 NODE_62801_length_259_cov_1.419643_g54860_i0forward_frame_2 - 0.18 11.4 0.1 0.24 11.0 0.1 1.1 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PSD1 PF07587.11 NODE_62799_length_259_cov_1.424107_g54858_i0forward_frame_2 - 0.00024 20.7 0.0 0.00027 20.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1553) MORN PF02493.20 NODE_62798_length_259_cov_1.424107_g54857_i0reverse_frame_2 - 5.3e-16 57.5 22.5 5.1e-07 29.2 1.9 3.2 3 0 0 3 3 3 3 MORN repeat Catalase PF00199.19 NODE_62795_length_259_cov_1.437500_g54854_i0forward_frame_3 - 1.1e-33 116.9 2.5 1.1e-33 116.9 2.5 1.0 1 0 0 1 1 1 1 Catalase SOXp PF12336.8 NODE_62795_length_259_cov_1.437500_g54854_i0forward_frame_3 - 0.093 13.8 0.1 0.097 13.7 0.1 1.3 1 0 0 1 1 1 0 SOX transcription factor ORF6C PF10552.9 NODE_62793_length_259_cov_1.513393_g54852_i0reverse_frame_2 - 0.036 14.1 0.3 0.042 13.9 0.3 1.2 1 0 0 1 1 1 0 ORF6C domain Adeno_E1B_55K PF01696.17 NODE_62791_length_259_cov_1.584821_g54850_i0reverse_frame_3 - 0.035 12.8 0.1 0.038 12.7 0.1 1.0 1 0 0 1 1 1 0 Adenovirus EB1 55K protein / large t-antigen SID PF11778.8 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_3 - 0.021 14.9 0.2 0.024 14.8 0.2 1.2 1 0 0 1 1 1 0 Septation initiation NMD3 PF04981.13 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_3 - 0.034 13.6 0.0 0.034 13.6 0.0 1.1 1 0 0 1 1 1 0 NMD3 family Thioredoxin_2 PF13098.6 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_3 - 0.04 14.4 0.1 0.055 13.9 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain UCH PF00443.29 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_2 - 0.016 14.7 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase PRiA4_ORF3 PF07929.11 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_2 - 0.05 13.3 0.0 0.063 13.0 0.0 1.1 1 0 0 1 1 1 0 Plasmid pRiA4b ORF-3-like protein Pox_F15 PF04596.12 NODE_62790_length_259_cov_1.598214_g54849_i0forward_frame_3 - 0.076 12.8 0.4 2.9 7.6 0.1 2.0 2 0 0 2 2 2 0 Poxvirus protein F15 Aldo_ket_red PF00248.21 NODE_62788_length_259_cov_1.607143_g54847_i0reverse_frame_2 - 0.0092 15.2 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family ING PF12998.7 NODE_62785_length_259_cov_1.656250_g54844_i0forward_frame_2 - 0.046 14.3 0.8 0.064 13.9 0.8 1.4 1 1 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding DUF1653 PF07866.11 NODE_62784_length_259_cov_1.665179_g54843_i0reverse_frame_3 - 0.1 12.9 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1653) SPECT1 PF18680.1 NODE_62784_length_259_cov_1.665179_g54843_i0forward_frame_2 - 0.13 11.9 1.3 0.15 11.7 1.3 1.0 1 0 0 1 1 1 0 Plasmodium host cell traversal SPECT1 Keratin_B2_2 PF13885.6 NODE_62783_length_259_cov_1.683036_g54842_i0forward_frame_3 - 0.036 14.0 3.6 0.036 14.0 3.6 1.6 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein zf-FCS PF06467.14 NODE_62780_length_259_cov_1.687500_g54839_i0reverse_frame_3 - 0.09 12.7 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif ObR_Ig PF18589.1 NODE_62778_length_259_cov_1.700893_g54837_i0reverse_frame_2 - 0.0085 16.5 1.0 0.011 16.1 1.0 1.2 1 0 0 1 1 1 1 Obesity receptor immunoglobulin like domain CATSPERG PF15064.6 NODE_62776_length_259_cov_1.732143_g54835_i0forward_frame_2 - 0.0093 13.8 1.0 0.011 13.6 1.0 1.0 1 0 0 1 1 1 1 Cation channel sperm-associated protein subunit gamma Defensin_5 PF18251.1 NODE_62774_length_259_cov_1.776786_g54833_i0reverse_frame_3 - 0.0021 18.1 7.0 0.0029 17.6 7.0 1.2 1 0 0 1 1 1 1 Fungal defensin Copsin SUR7 PF06687.12 NODE_62772_length_259_cov_1.785714_g54831_i0reverse_frame_2 - 4.5 6.8 11.1 5.6 6.5 11.1 1.1 1 0 0 1 1 1 0 SUR7/PalI family CxC1 PF18802.1 NODE_62767_length_259_cov_1.852679_g54826_i0forward_frame_2 - 0.019 15.1 0.2 0.023 14.9 0.2 1.2 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases Molybdopterin PF00384.22 NODE_62765_length_259_cov_1.879464_g54824_i0reverse_frame_3 - 0.00081 18.5 0.0 0.00088 18.3 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase zf-TRM13_CCCH PF11722.8 NODE_62764_length_259_cov_1.883929_g54823_i0reverse_frame_3 - 0.73 9.6 4.6 12 5.7 1.1 2.3 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein TBCC PF07986.12 NODE_62759_length_259_cov_1.928571_g54818_i0reverse_frame_3 - 7.1e-25 87.1 0.7 7.7e-25 87.0 0.7 1.0 1 0 0 1 1 1 1 Tubulin binding cofactor C TPR_14 PF13428.6 NODE_62755_length_259_cov_1.982143_g54814_i0reverse_frame_3 - 0.0018 18.9 0.0 0.7 10.9 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_62755_length_259_cov_1.982143_g54814_i0reverse_frame_3 - 0.011 16.0 0.1 1.7 9.2 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_62755_length_259_cov_1.982143_g54814_i0reverse_frame_3 - 0.035 14.6 0.1 1.7 9.2 0.0 2.3 1 1 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_62755_length_259_cov_1.982143_g54814_i0reverse_frame_3 - 0.13 13.0 0.0 11 6.7 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Golgin_A5 PF09787.9 NODE_62754_length_259_cov_1.986607_g54813_i0reverse_frame_2 - 0.0034 16.9 6.1 0.0035 16.8 6.1 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 PI3K_P85_iSH2 PF16454.5 NODE_62754_length_259_cov_1.986607_g54813_i0reverse_frame_2 - 0.031 13.9 9.0 0.035 13.7 9.0 1.0 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain EamA PF00892.20 NODE_62753_length_259_cov_1.991071_g54812_i0forward_frame_3 - 0.00036 20.7 11.9 0.00041 20.5 11.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family Peptidase_M16_C PF05193.21 NODE_62747_length_259_cov_2.183036_g54806_i0forward_frame_2 - 0.00025 21.1 0.0 0.00027 21.0 0.0 1.0 1 0 0 1 1 1 1 Peptidase M16 inactive domain DUF1759 PF03564.15 NODE_62746_length_259_cov_2.205357_g54805_i0forward_frame_3 - 0.15 12.0 0.0 0.19 11.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1759) Imm27 PF15590.6 NODE_62745_length_259_cov_2.209821_g54804_i0reverse_frame_3 - 0.16 11.7 1.8 0.24 11.2 1.2 1.6 1 1 0 1 1 1 0 Immunity protein 27 7tm_1 PF00001.21 NODE_62745_length_259_cov_2.209821_g54804_i0forward_frame_3 - 3 7.1 7.0 0.12 11.7 0.5 1.7 1 1 1 2 2 2 0 7 transmembrane receptor (rhodopsin family) JSRP PF15312.6 NODE_62744_length_259_cov_2.214286_g54803_i0forward_frame_3 - 0.21 11.5 0.3 0.31 11.0 0.0 1.4 2 0 0 2 2 2 0 Junctional sarcoplasmic reticulum protein TPR_2 PF07719.17 NODE_62741_length_259_cov_2.223214_g54800_i0forward_frame_2 - 0.0034 17.4 0.2 0.0091 16.0 0.0 1.9 2 1 0 2 2 2 1 Tetratricopeptide repeat Anp1 PF03452.14 NODE_62741_length_259_cov_2.223214_g54800_i0forward_frame_2 - 0.076 12.4 0.1 0.079 12.4 0.1 1.1 1 0 0 1 1 1 0 Anp1 IBD PF10416.9 NODE_62739_length_259_cov_2.294643_g54798_i0reverse_frame_2 - 0.047 13.7 0.4 0.057 13.4 0.4 1.1 1 0 0 1 1 1 0 Transcription-initiator DNA-binding domain IBD Exonuc_VII_L PF02601.15 NODE_62739_length_259_cov_2.294643_g54798_i0forward_frame_2 - 3.3e-08 33.5 11.0 3.8e-08 33.2 11.0 1.0 1 0 0 1 1 1 1 Exonuclease VII, large subunit Meth_synt_1 PF08267.12 NODE_62734_length_259_cov_2.473214_g54793_i0reverse_frame_2 - 0.022 14.3 0.0 0.026 14.0 0.0 1.1 1 0 0 1 1 1 0 Cobalamin-independent synthase, N-terminal domain Shisa PF13908.6 NODE_62733_length_259_cov_2.553571_g54792_i0forward_frame_3 - 0.027 14.7 4.1 0.033 14.4 4.1 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF975 PF06161.11 NODE_62733_length_259_cov_2.553571_g54792_i0forward_frame_3 - 0.23 11.2 10.3 0.26 11.0 10.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF975) DUF4349 PF14257.6 NODE_62733_length_259_cov_2.553571_g54792_i0forward_frame_3 - 0.39 10.1 5.4 0.44 9.9 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DegT_DnrJ_EryC1 PF01041.17 NODE_62731_length_259_cov_2.633929_g54790_i0forward_frame_2 - 2.7e-36 125.7 2.0 2.8e-36 125.6 2.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family DUF498 PF04430.14 NODE_62726_length_259_cov_2.732143_g54785_i0reverse_frame_3 - 0.036 14.1 0.0 0.038 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) DAO PF01266.24 NODE_62725_length_259_cov_2.785714_g54784_i0forward_frame_3 - 3.9e-05 23.4 0.0 4e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase IL13 PF03487.13 NODE_62721_length_259_cov_3.008929_g54780_i0forward_frame_3 - 0.021 14.6 0.3 0.021 14.6 0.3 1.1 1 0 0 1 1 1 0 Interleukin-13 Mo-co_dimer PF03404.16 NODE_62718_length_259_cov_3.156250_g54777_i0reverse_frame_2 - 0.079 13.0 0.0 0.091 12.8 0.0 1.1 1 0 0 1 1 1 0 Mo-co oxidoreductase dimerisation domain Peptidase_M15_3 PF08291.11 NODE_62718_length_259_cov_3.156250_g54777_i0forward_frame_3 - 0.065 13.3 0.0 0.076 13.1 0.0 1.2 1 0 0 1 1 1 0 Peptidase M15 DUF2457 PF10446.9 NODE_62715_length_259_cov_3.455357_g54774_i0reverse_frame_3 - 0.094 11.9 2.4 0.1 11.8 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Flt3_lig PF02947.14 NODE_62707_length_259_cov_4.821429_g54766_i0reverse_frame_2 - 0.075 13.2 0.4 0.09 13.0 0.4 1.1 1 0 0 1 1 1 0 flt3 ligand PH PF00169.29 NODE_62705_length_259_cov_10.080357_g54764_i0forward_frame_2 - 1.1e-05 25.8 0.5 1.6e-05 25.3 0.5 1.2 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 NODE_62705_length_259_cov_10.080357_g54764_i0forward_frame_2 - 0.042 14.1 0.3 0.059 13.6 0.3 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain Adeno_E3_CR2 PF02439.15 NODE_62704_length_259_cov_19.660714_g54763_i0reverse_frame_2 - 0.32 10.8 1.4 0.46 10.3 1.4 1.2 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 SUR7 PF06687.12 NODE_62703_length_259_cov_20.937500_g54762_i0reverse_frame_2 - 0.56 9.8 2.2 0.56 9.8 2.2 1.0 1 0 0 1 1 1 0 SUR7/PalI family DHHC PF01529.20 NODE_62699_length_259_cov_28.955357_g54758_i0reverse_frame_2 - 0.027 14.6 0.1 0.035 14.2 0.1 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase RRM_1 PF00076.22 NODE_62695_length_259_cov_33.669643_g54754_i0forward_frame_2 - 2.2e-07 30.6 0.3 3.9e-07 29.8 0.1 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 NODE_62695_length_259_cov_33.669643_g54754_i0forward_frame_2 - 2e-05 24.2 0.0 2.2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 NODE_62695_length_259_cov_33.669643_g54754_i0forward_frame_2 - 0.0016 18.3 0.0 0.0021 17.9 0.0 1.2 1 0 0 1 1 1 1 Occluded RNA-recognition motif Limkain-b1 PF11608.8 NODE_62695_length_259_cov_33.669643_g54754_i0forward_frame_2 - 0.0029 17.6 0.4 0.006 16.6 0.1 1.6 1 1 0 2 2 2 1 Limkain b1 KCT2 PF17818.1 NODE_62693_length_259_cov_35.035714_g54752_i0forward_frame_2 - 0.46 10.6 1.5 0.7 10.0 1.5 1.2 1 0 0 1 1 1 0 Keratinocyte-associated gene product PqiA PF04403.13 NODE_62692_length_259_cov_35.049107_g54751_i0forward_frame_3 - 0.016 15.0 0.2 0.016 15.0 0.2 1.1 1 0 0 1 1 1 0 Paraquat-inducible protein A SR-25 PF10500.9 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 0.044 13.4 25.1 0.047 13.3 25.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein STAC2_u1 PF16664.5 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 0.57 10.6 9.6 0.67 10.4 9.6 1.1 1 0 0 1 1 1 0 Unstructured on SH3 and cysteine-rich domain-containing protein 2 Vfa1 PF08432.10 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 1.2 9.4 19.9 1.3 9.3 19.9 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 PBP_sp32 PF07222.12 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 4 6.8 13.5 4.3 6.7 13.5 1.0 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Coilin_N PF15862.5 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 4.3 7.2 21.1 4.9 6.9 21.1 1.1 1 0 0 1 1 1 0 Coilin N-terminus 2OG-FeII_Oxy_3 PF13640.6 NODE_62680_length_259_cov_52.334821_g54739_i0reverse_frame_3 - 0.056 14.3 0.0 0.071 14.0 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Corona_I PF03187.14 NODE_62676_length_259_cov_55.959821_g54735_i0reverse_frame_3 - 0.024 14.3 0.0 0.031 14.0 0.0 1.1 1 0 0 1 1 1 0 Corona nucleocapsid I protein GGN PF15685.5 NODE_62674_length_259_cov_57.892857_g54733_i0reverse_frame_3 - 0.23 10.5 3.5 0.26 10.3 3.5 1.0 1 0 0 1 1 1 0 Gametogenetin ubiquitin PF00240.23 NODE_62667_length_259_cov_68.517857_g54726_i0reverse_frame_3 - 1.2e-08 34.5 0.0 1.7e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_62667_length_259_cov_68.517857_g54726_i0reverse_frame_3 - 0.037 13.8 0.0 0.06 13.2 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like UPF0231 PF06062.11 NODE_62667_length_259_cov_68.517857_g54726_i0reverse_frame_3 - 0.046 14.0 0.0 0.057 13.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0231) TBK1_ULD PF18396.1 NODE_62667_length_259_cov_68.517857_g54726_i0reverse_frame_3 - 0.22 11.5 0.0 0.25 11.3 0.0 1.1 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain BTP PF05232.12 NODE_62665_length_259_cov_71.919643_g54724_i0forward_frame_3 - 0.0057 16.7 3.9 0.009 16.1 3.9 1.4 1 0 0 1 1 1 1 Chlorhexidine efflux transporter GSK-3_bind PF05350.12 NODE_62664_length_259_cov_72.816964_g54723_i0forward_frame_3 - 0.049 12.9 0.0 0.057 12.7 0.0 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding Stomoxyn PF11585.8 NODE_62663_length_259_cov_74.116071_g54722_i0forward_frame_3 - 0.0016 18.4 0.1 0.0024 17.9 0.1 1.2 1 0 0 1 1 1 1 Insect antimicrobial peptide, stomoxyn TMEM154 PF15102.6 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 1.4e-05 25.0 0.0 1.7e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 TMEM154 protein family TMEM51 PF15345.6 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.00074 19.4 0.0 0.00081 19.3 0.0 1.0 1 0 0 1 1 1 1 Transmembrane protein 51 Herpes_gE PF02480.16 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.00075 18.4 0.0 0.00078 18.3 0.0 1.0 1 0 0 1 1 1 1 Alphaherpesvirus glycoprotein E DUF4448 PF14610.6 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.0016 18.3 0.0 0.002 18.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4448) UPF0560 PF10577.9 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.0042 15.7 0.0 0.0048 15.5 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0560 VSP PF03302.13 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.0046 15.9 0.0 0.0051 15.7 0.0 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein DUF5305 PF17231.2 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.011 15.1 0.0 0.012 15.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF3827 PF12877.7 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.013 14.0 0.0 0.014 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) DUF2207 PF09972.9 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.015 14.1 0.0 0.015 14.0 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Podoplanin PF05808.11 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.017 15.2 0.1 0.021 14.9 0.1 1.1 1 0 0 1 1 1 0 Podoplanin Orf78 PF06024.12 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.018 15.4 0.0 0.021 15.1 0.0 1.1 1 0 0 1 1 1 0 Orf78 (ac78) Tweety PF04906.13 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.031 13.0 0.0 0.037 12.7 0.0 1.0 1 0 0 1 1 1 0 Tweety Prominin PF05478.11 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.034 12.1 0.0 0.034 12.1 0.0 1.0 1 0 0 1 1 1 0 Prominin RIFIN PF02009.16 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.044 13.7 0.0 0.051 13.5 0.0 1.0 1 0 0 1 1 1 0 Rifin DUF3377 PF11857.8 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.057 13.3 0.6 0.093 12.7 0.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3377) Peptidase_M56 PF05569.11 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.067 12.4 0.0 0.079 12.1 0.0 1.0 1 0 0 1 1 1 0 BlaR1 peptidase M56 CrgA PF06781.12 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.1 12.7 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Cell division protein CrgA SKG6 PF08693.10 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 5.7 6.4 13.0 0.35 10.3 5.1 2.2 1 1 1 2 2 2 0 Transmembrane alpha-helix domain TRAP_alpha PF03896.16 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 0.76 8.9 7.9 0.75 8.9 7.9 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Nop14 PF04147.12 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 2.3 6.4 15.6 2.4 6.3 15.6 1.0 1 0 0 1 1 1 0 Nop14-like family DUF4746 PF15928.5 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 3 7.2 11.7 3.4 7.0 11.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Zip PF02535.22 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 4.1 6.5 3.6 4 6.6 3.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter RRN3 PF05327.11 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 4.6 5.7 8.7 4.8 5.6 8.7 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 RNA_pol_3_Rpc31 PF11705.8 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 7.3 6.8 20.7 11 6.2 20.7 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DNA_pol_phi PF04931.13 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 7.4 4.5 16.1 7.5 4.5 16.1 1.2 1 0 0 1 1 1 0 DNA polymerase phi Pes-10 PF07149.11 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 9.1 5.2 13.8 9.2 5.2 13.8 1.0 1 0 0 1 1 1 0 Pes-10 COX14 PF14880.6 NODE_62657_length_259_cov_92.031250_g54716_i0forward_frame_3 - 0.2 11.5 4.1 0.29 11.0 3.2 1.7 1 1 1 2 2 2 0 Cytochrome oxidase c assembly PLDc_3 PF13918.6 NODE_62656_length_259_cov_92.794643_g54715_i0reverse_frame_3 - 0.18 11.5 0.1 0.21 11.2 0.1 1.1 1 0 0 1 1 1 0 PLD-like domain Peptidase_C101 PF16218.5 NODE_62648_length_259_cov_156.053571_g54707_i0forward_frame_3 - 0.007 15.7 0.1 0.0074 15.6 0.1 1.0 1 0 0 1 1 1 1 Peptidase family C101 DUF728 PF05304.12 NODE_62648_length_259_cov_156.053571_g54707_i0forward_frame_3 - 0.63 9.9 3.8 0.83 9.5 3.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF728) RP854 PF17460.2 NODE_62645_length_259_cov_166.901786_g54704_i0reverse_frame_2 - 0.11 12.3 0.4 0.13 12.0 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein RP854 CRISPR_assoc PF08798.11 NODE_62643_length_259_cov_232.214286_g54702_i0forward_frame_3 - 0.2 11.7 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 CRISPR associated protein DNA_processg_A PF02481.15 NODE_62637_length_259_cov_591.736607_g54696_i0reverse_frame_3 - 0.11 11.7 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 DNA recombination-mediator protein A DUF2102 PF09875.9 NODE_62632_length_259_cov_4210.183036_g54691_i0reverse_frame_2 - 0.076 12.7 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) Chloroa_b-bind PF00504.21 NODE_62632_length_259_cov_4210.183036_g54691_i0forward_frame_3 - 7.7e-08 33.0 0.3 7.7e-08 33.0 0.3 1.2 1 1 0 1 1 1 1 Chlorophyll A-B binding protein URO-D PF01208.17 NODE_62630_length_260_cov_0.853333_g54689_i0forward_frame_2 - 0.18 11.0 0.0 0.2 10.8 0.0 1.0 1 0 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) HECA PF15353.6 NODE_62629_length_260_cov_0.853333_g54688_i0forward_frame_2 - 0.03 14.6 0.1 0.04 14.1 0.1 1.3 1 0 0 1 1 1 0 Headcase protein family homologue RITA PF17066.5 NODE_62628_length_260_cov_0.897778_g54687_i0forward_frame_3 - 0.072 12.7 0.0 0.08 12.5 0.0 1.0 1 0 0 1 1 1 0 RBPJ-interacting and tubulin associated protein Reovirus_Mu2 PF07781.11 NODE_62628_length_260_cov_0.897778_g54687_i0forward_frame_3 - 0.12 10.7 0.0 0.13 10.6 0.0 1.0 1 0 0 1 1 1 0 Reovirus minor core protein Mu-2 Filo_VP24 PF06389.11 NODE_62626_length_260_cov_1.017778_g54685_i0forward_frame_3 - 0.03 13.9 0.2 0.032 13.8 0.2 1.1 1 0 0 1 1 1 0 Filovirus membrane-associated protein VP24 CAP_N PF01213.19 NODE_62625_length_260_cov_1.040000_g54684_i0reverse_frame_2 - 2.9 7.3 6.0 3 7.3 6.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Herpes_UL92 PF03048.14 NODE_62619_length_260_cov_1.111111_g54678_i0forward_frame_3 - 0.14 11.9 0.0 0.17 11.7 0.0 1.0 1 0 0 1 1 1 0 UL92 family DUF621 PF04789.15 NODE_62617_length_260_cov_1.155556_g54676_i0forward_frame_3 - 0.046 12.9 0.3 0.046 12.9 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF621) HEAT PF02985.22 NODE_62616_length_260_cov_1.164444_g54675_i0reverse_frame_3 - 0.071 13.4 0.1 13 6.4 0.0 2.8 2 1 1 3 3 3 0 HEAT repeat HEAT_2 PF13646.6 NODE_62616_length_260_cov_1.164444_g54675_i0reverse_frame_3 - 0.075 13.4 0.0 0.091 13.2 0.0 1.3 1 0 0 1 1 1 0 HEAT repeats V-ATPase_H_N PF03224.14 NODE_62609_length_260_cov_1.244444_g54668_i0forward_frame_2 - 0.014 14.7 0.6 0.016 14.5 0.6 1.1 1 0 0 1 1 1 0 V-ATPase subunit H Lamprin PF06403.11 NODE_62604_length_260_cov_1.271111_g54663_i0forward_frame_3 - 0.15 12.1 5.7 0.17 11.8 5.7 1.2 1 0 0 1 1 1 0 Lamprin Alveol-reg_P311 PF11092.8 NODE_62602_length_260_cov_1.302222_g54661_i0reverse_frame_2 - 0.11 12.7 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Neuronal protein 3.1 (p311) Microvir_lysis PF04517.12 NODE_62600_length_260_cov_1.315556_g54659_i0reverse_frame_2 - 0.19 11.6 2.1 14 5.7 0.2 2.5 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus DUF4797 PF16051.5 NODE_62599_length_260_cov_1.324444_g54658_i0forward_frame_3 - 0.041 13.8 0.1 0.069 13.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4797) DUF1263 PF06882.12 NODE_62591_length_260_cov_1.422222_g54650_i0reverse_frame_3 - 0.1 12.7 0.2 0.13 12.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1263) Pkinase PF00069.25 NODE_62589_length_260_cov_1.448889_g54648_i0forward_frame_3 - 4.8e-14 52.4 0.0 4.8e-14 52.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_62589_length_260_cov_1.448889_g54648_i0forward_frame_3 - 1.2e-09 37.9 0.0 1.2e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Arm PF00514.23 NODE_62587_length_260_cov_1.466667_g54646_i0reverse_frame_2 - 0.0012 18.8 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Armadillo/beta-catenin-like repeat DUF35_N PF12172.8 NODE_62585_length_260_cov_1.484444_g54644_i0forward_frame_3 - 0.047 13.6 0.2 0.08 12.8 0.2 1.3 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) RsfS PF02410.15 NODE_62584_length_260_cov_1.497778_g54643_i0reverse_frame_2 - 0.14 12.6 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal silencing factor during starvation DUF5631 PF18645.1 NODE_62584_length_260_cov_1.497778_g54643_i0forward_frame_3 - 0.02 15.3 0.0 0.023 15.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5631) TMC PF07810.13 NODE_62578_length_260_cov_1.555556_g54637_i0reverse_frame_2 - 0.031 14.9 0.8 0.046 14.3 0.8 1.3 1 0 0 1 1 1 0 TMC domain Knl1_RWD_C PF18210.1 NODE_62578_length_260_cov_1.555556_g54637_i0forward_frame_2 - 0.025 15.1 0.2 0.025 15.1 0.2 1.2 1 0 0 1 1 1 0 Knl1 RWD C-terminal domain DUF1450 PF07293.11 NODE_62577_length_260_cov_1.555556_g54636_i0forward_frame_3 - 0.0062 16.3 0.7 0.0078 16.0 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1450) CD225 PF04505.12 NODE_62574_length_260_cov_1.564444_g54633_i0reverse_frame_3 - 5.6 7.2 10.5 0.27 11.4 1.0 2.2 1 1 1 2 2 2 0 Interferon-induced transmembrane protein V-ATPase_H_C PF11698.8 NODE_62574_length_260_cov_1.564444_g54633_i0forward_frame_2 - 0.085 13.0 0.1 0.098 12.8 0.1 1.1 1 0 0 1 1 1 0 V-ATPase subunit H DUF1980 PF09323.10 NODE_62573_length_260_cov_1.564444_g54632_i0forward_frame_3 - 0.51 10.2 5.7 0.63 9.9 5.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) UBA_3 PF09288.10 NODE_62571_length_260_cov_1.600000_g54630_i0reverse_frame_3 - 0.021 14.6 1.2 5.3 6.9 0.1 2.2 2 0 0 2 2 2 0 Fungal ubiquitin-associated domain Toxin_19 PF08088.12 NODE_62569_length_260_cov_1.648889_g54628_i0forward_frame_3 - 0.034 14.3 6.7 0.067 13.3 6.7 1.5 1 0 0 1 1 1 0 Conotoxin I-superfamily DUF5420 PF17457.2 NODE_62564_length_260_cov_1.746667_g54623_i0reverse_frame_2 - 0.09 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5420) SLC3A2_N PF16028.5 NODE_62563_length_260_cov_1.773333_g54622_i0reverse_frame_2 - 0.17 11.5 0.4 0.26 10.9 0.4 1.4 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Spt4 PF06093.13 NODE_62558_length_260_cov_1.831111_g54617_i0forward_frame_2 - 6.2e-16 58.3 2.1 8.5e-16 57.8 2.1 1.2 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger TBCC PF07986.12 NODE_62558_length_260_cov_1.831111_g54617_i0forward_frame_2 - 0.011 15.5 0.3 0.013 15.2 0.3 1.1 1 0 0 1 1 1 0 Tubulin binding cofactor C Rrp15p PF07890.12 NODE_62556_length_260_cov_1.880000_g54615_i0forward_frame_3 - 0.069 13.5 0.0 0.083 13.2 0.0 1.1 1 0 0 1 1 1 0 Rrp15p DUF892 PF05974.12 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 4.6e-23 82.0 0.3 4.9e-23 81.9 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) DUF871 PF05913.11 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.00015 21.1 0.1 0.00015 21.1 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF871) THOC7 PF05615.13 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.0048 17.2 1.4 0.0057 16.9 1.4 1.1 1 0 0 1 1 1 1 Tho complex subunit 7 Tektin PF03148.14 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.0073 15.1 1.0 0.0073 15.1 1.0 1.1 1 0 0 1 1 1 1 Tektin family HR1 PF02185.16 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.013 15.6 1.1 0.018 15.1 0.9 1.3 1 1 0 1 1 1 0 Hr1 repeat IDO PF01231.18 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.024 13.4 0.4 0.027 13.3 0.4 1.0 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase LemA PF04011.12 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.061 13.2 0.1 0.063 13.1 0.1 1.3 1 0 0 1 1 1 0 LemA family GatB_Yqey PF02637.18 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.068 13.0 0.2 0.083 12.8 0.2 1.3 1 1 0 1 1 1 0 GatB domain DNA_repr_REX1B PF14966.6 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.079 13.6 0.3 0.095 13.4 0.3 1.1 1 0 0 1 1 1 0 DNA repair REX1-B DUF883 PF05957.13 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.13 12.9 0.2 0.2 12.3 0.2 1.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CxC2 PF18803.1 NODE_62550_length_260_cov_1.955556_g54609_i0forward_frame_2 - 0.14 12.3 1.5 4 7.6 0.2 2.0 1 1 1 2 2 2 0 CxC2 like cysteine cluster associated with KDZ transposases DUF3685 PF12452.8 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_2 - 0.038 13.7 0.1 0.04 13.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) Pardaxin PF07425.11 NODE_62547_length_260_cov_2.075556_g54606_i0forward_frame_2 - 0.41 10.3 0.3 0.41 10.3 0.3 2.0 2 0 0 2 2 2 0 Pardaxin Fanconi_A_N PF15865.5 NODE_62544_length_260_cov_2.128889_g54603_i0reverse_frame_2 - 0.036 13.5 0.3 0.044 13.2 0.3 1.0 1 0 0 1 1 1 0 Fanconi anaemia group A protein N terminus APOBEC1 PF18769.1 NODE_62542_length_260_cov_2.173333_g54601_i0reverse_frame_2 - 0.38 11.0 4.4 0.37 11.1 3.7 1.4 1 1 0 1 1 1 0 APOBEC1 Reticulon PF02453.17 NODE_62541_length_260_cov_2.195556_g54600_i0reverse_frame_3 - 0.0088 16.0 0.3 0.01 15.8 0.3 1.1 1 0 0 1 1 1 1 Reticulon ArsP_2 PF11449.8 NODE_62541_length_260_cov_2.195556_g54600_i0reverse_frame_3 - 0.11 11.7 0.3 0.13 11.4 0.3 1.0 1 0 0 1 1 1 0 Putative, 10TM heavy-metal exporter DUF3223 PF11523.8 NODE_62539_length_260_cov_2.235556_g54598_i0forward_frame_2 - 2.7e-14 53.8 0.5 3.5e-14 53.4 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3223) DUF5101 PF17031.5 NODE_62539_length_260_cov_2.235556_g54598_i0forward_frame_2 - 0.0099 16.0 0.1 0.014 15.5 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5101) DUF4120 PF13496.6 NODE_62539_length_260_cov_2.235556_g54598_i0forward_frame_2 - 0.13 12.6 0.4 0.75 10.2 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4120) fn3_4 PF16794.5 NODE_62534_length_260_cov_2.293333_g54593_i0forward_frame_3 - 0.11 12.4 0.3 0.14 12.1 0.3 1.1 1 0 0 1 1 1 0 Fibronectin-III type domain Kinesin PF00225.23 NODE_62532_length_260_cov_2.302222_g54591_i0reverse_frame_3 - 9.4e-16 57.6 2.0 1.1e-15 57.4 2.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain RPT PF13446.6 NODE_62532_length_260_cov_2.302222_g54591_i0reverse_frame_3 - 0.011 15.7 0.1 0.016 15.1 0.1 1.4 1 1 0 1 1 1 0 A repeated domain in UCH-protein MFS_3 PF05977.13 NODE_62532_length_260_cov_2.302222_g54591_i0reverse_frame_3 - 0.027 12.9 0.1 0.03 12.7 0.1 1.0 1 0 0 1 1 1 0 Transmembrane secretion effector YuiB PF14068.6 NODE_62532_length_260_cov_2.302222_g54591_i0forward_frame_3 - 0.016 15.8 0.1 0.016 15.8 0.1 1.9 1 1 1 2 2 2 0 Putative membrane protein Uteroglobin PF01099.17 NODE_62529_length_260_cov_2.386667_g54588_i0reverse_frame_2 - 0.098 13.0 0.0 0.22 11.9 0.0 1.5 1 1 1 2 2 2 0 Uteroglobin family MFS_1 PF07690.16 NODE_62526_length_260_cov_2.453333_g54585_i0forward_frame_3 - 0.00056 18.9 9.6 0.00066 18.7 9.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1368 PF07112.11 NODE_62518_length_260_cov_2.662222_g54577_i0reverse_frame_2 - 0.05 12.4 0.1 0.061 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1368) ITAM_Cys-rich PF10538.9 NODE_62518_length_260_cov_2.662222_g54577_i0reverse_frame_2 - 0.14 11.9 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 Immunoreceptor tyrosine-based activation motif UPF0181 PF03701.14 NODE_62517_length_260_cov_2.684444_g54576_i0forward_frame_2 - 1.7e-13 50.0 1.8 2.4e-13 49.5 1.8 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0181) Exo_endo_phos PF03372.23 NODE_62512_length_260_cov_2.822222_g54571_i0reverse_frame_3 - 0.012 15.2 0.1 0.021 14.3 0.1 1.4 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks279.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks279.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks279.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks279.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:00:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cys_Met_Meta_PP PF01053.20 ORF923 - 6.6e-142 472.5 0.0 7.6e-142 472.4 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 ORF923 - 9.9e-08 31.5 0.0 1.4e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF923 - 2.1e-07 30.3 0.1 0.00016 20.8 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Met_gamma_lyase PF06838.11 ORF923 - 0.00012 20.7 0.0 0.00015 20.4 0.0 1.2 1 0 0 1 1 1 1 Methionine gamma-lyase SepSecS PF05889.13 ORF923 - 0.14 10.8 0.0 0.24 10.0 0.0 1.4 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Beta_elim_lyase PF01212.21 ORF923 - 0.15 11.4 0.1 0.24 10.6 0.1 1.4 1 1 0 1 1 1 0 Beta-eliminating lyase MS_channel PF00924.18 ORF88484 - 9.7e-21 74.3 5.7 1.6e-20 73.5 5.7 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel ETRAMP PF09716.10 ORF88484 - 0.046 13.8 0.0 0.12 12.4 0.0 1.7 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) ABC_tran PF00005.27 ORF88117 - 1.3e-39 135.8 0.1 4.5e-29 101.7 0.1 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 ORF88117 - 6.3e-06 26.2 0.9 0.049 13.4 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF88117 - 0.00024 20.8 0.6 0.003 17.3 0.0 2.7 3 0 0 3 3 3 1 P-loop containing region of AAA domain SMC_N PF02463.19 ORF88117 - 0.00071 19.1 1.2 0.48 9.8 0.1 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF88117 - 0.0032 18.0 0.1 0.007 16.9 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 ORF88117 - 0.0047 16.7 0.8 0.024 14.4 0.1 1.9 1 1 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF88117 - 0.014 15.3 0.4 0.052 13.5 0.0 2.1 3 0 0 3 3 3 0 RsgA GTPase MCM PF00493.23 ORF88117 - 0.015 14.4 0.0 0.031 13.4 0.0 1.4 1 0 0 1 1 1 0 MCM P-loop domain AAA_16 PF13191.6 ORF88117 - 0.017 15.5 0.2 0.36 11.2 0.0 2.6 3 0 0 3 3 3 0 AAA ATPase domain AAA_22 PF13401.6 ORF88117 - 0.027 14.8 6.3 0.3 11.4 2.8 3.1 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 ORF88117 - 0.033 13.9 0.0 0.23 11.1 0.0 2.3 2 1 0 2 2 2 0 AAA domain TsaE PF02367.17 ORF88117 - 0.048 13.7 0.1 1 9.4 0.0 2.6 3 0 0 3 3 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 ORF88117 - 0.06 13.5 0.0 0.69 10.1 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 ORF88117 - 0.14 12.6 0.2 1.5 9.3 0.2 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 ORF88117 - 0.17 12.3 0.1 0.53 10.7 0.1 1.8 1 0 0 1 1 1 0 RNA helicase zf-HC5HC2H_2 PF13832.6 ORF81785 - 0.0094 16.1 0.0 0.018 15.2 0.0 1.6 1 0 0 1 1 1 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 ORF81785 - 0.05 13.9 0.1 0.14 12.4 0.0 1.7 2 0 0 2 2 2 0 PHD-like zinc-binding domain SbcCD_C PF13558.6 ORF79883 - 1.3e-05 25.3 0.1 0.00011 22.3 0.0 2.3 1 1 1 2 2 2 1 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF79883 - 2.7e-05 23.7 0.1 3.2e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF79883 - 4.6e-05 23.4 0.0 0.00014 21.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Baculo_PEP_C PF04513.12 ORF79883 - 0.0063 16.6 0.1 0.093 12.8 0.0 2.6 3 0 0 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus AAA_15 PF13175.6 ORF79883 - 0.057 13.1 2.1 0.91 9.2 2.1 2.2 1 1 0 1 1 1 0 AAA ATPase domain DUF4392 PF14336.6 ORF79883 - 0.14 11.5 0.5 0.27 10.6 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4392) AAA_23 PF13476.6 ORF79883 - 0.56 10.7 13.1 0.047 14.2 7.1 2.2 2 0 0 2 2 2 0 AAA domain Rx_N PF18052.1 ORF79883 - 0.89 9.9 8.8 0.29 11.4 3.8 2.5 1 1 1 2 2 2 0 Rx N-terminal domain Exonuc_VII_L PF02601.15 ORF79883 - 1.3 8.5 14.2 1.9 8.0 13.1 1.7 1 1 1 2 2 2 0 Exonuclease VII, large subunit DUF1043 PF06295.12 ORF79883 - 1.4 8.9 6.4 1.4 9.0 4.8 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) Noelin-1 PF12308.8 ORF79883 - 1.7 8.7 5.3 7.4 6.6 0.1 3.3 4 0 0 4 4 4 0 Neurogenesis glycoprotein Spc7 PF08317.11 ORF79883 - 2.1 7.1 21.3 1.6 7.6 6.9 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein OmpH PF03938.14 ORF79883 - 2.2 8.6 18.7 4.9 7.5 3.9 2.7 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) THOC7 PF05615.13 ORF79883 - 2.9 8.2 16.8 0.69 10.2 5.2 2.7 1 1 1 2 2 2 0 Tho complex subunit 7 Csm1_N PF18504.1 ORF79883 - 3.3 8.1 13.6 7.8 6.9 1.7 3.9 1 1 2 3 3 3 0 Csm1 N-terminal domain CorA PF01544.18 ORF79883 - 4.2 6.6 9.0 6.3 6.0 8.2 1.6 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein Cep57_CLD_2 PF14197.6 ORF79883 - 4.7 7.4 16.9 1.1 9.4 7.9 2.7 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 FadA PF09403.10 ORF79883 - 5.6 7.5 15.1 2.6 8.6 8.5 3.3 2 1 1 3 3 3 0 Adhesion protein FadA DUF4094 PF13334.6 ORF79883 - 7 7.2 8.1 8 7.0 3.4 2.9 2 2 1 3 3 3 0 Domain of unknown function (DUF4094) T3SSipB PF16535.5 ORF79883 - 8.3 6.9 12.2 22 5.5 8.0 2.6 1 1 2 3 3 3 0 Type III cell invasion protein SipB FapA PF03961.13 ORF79883 - 8.4 4.9 9.4 8.2 4.9 2.8 1.5 1 1 1 2 2 2 0 Flagellar Assembly Protein A LETM1 PF07766.13 ORF7761 - 1.6e-13 50.7 2.0 1.6e-13 50.7 2.0 2.4 2 1 1 3 3 3 1 LETM1-like protein NUMOD1 PF07453.13 ORF7761 - 0.05 13.9 0.5 0.22 11.8 0.1 2.3 2 0 0 2 2 2 0 NUMOD1 domain OmpH PF03938.14 ORF7761 - 0.41 11.0 10.9 0.084 13.2 2.7 2.8 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Peptidase_M3 PF01432.20 ORF56971 - 3.4e-72 244.2 0.0 3.8e-72 244.0 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 Lipase_3 PF01764.25 ORF56663 - 8.1e-26 90.6 0.0 2.2e-25 89.2 0.0 1.8 1 1 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF56663 - 0.0066 17.1 1.2 0.01 16.5 1.2 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF2974 PF11187.8 ORF56663 - 0.049 13.2 0.0 0.37 10.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2974) Helicase_C PF00271.31 ORF55805 - 2e-06 28.1 0.0 3.3e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Semialdhyde_dhC PF02774.18 ORF55805 - 0.064 13.3 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, dimerisation domain zf-HC5HC2H_2 PF13832.6 ORF49111 - 0.0094 16.1 0.0 0.018 15.2 0.0 1.6 1 0 0 1 1 1 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 ORF49111 - 0.05 13.9 0.1 0.14 12.4 0.0 1.7 2 0 0 2 2 2 0 PHD-like zinc-binding domain PP2C PF00481.21 ORF4570 - 1.5e-56 191.9 0.0 3e-56 190.9 0.0 1.5 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF4570 - 6.7e-10 38.9 0.0 6.7e-10 38.9 0.0 1.9 2 0 0 2 2 2 1 Protein phosphatase 2C Cas_Csy4 PF09618.10 ORF4570 - 1.1 9.3 6.9 1.7 8.8 6.9 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) Ion_trans PF00520.31 ORF43315 - 1.8e-24 86.3 17.6 2.3e-24 86.0 17.6 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF43315 - 0.11 11.2 20.7 0.18 10.4 12.0 2.1 2 0 0 2 2 2 0 Polycystin cation channel Ank_2 PF12796.7 ORF43145 - 8.6e-12 45.5 0.0 2e-11 44.3 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF43145 - 1.2e-10 41.7 0.0 3.1e-10 40.4 0.0 1.8 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Acetyltransf_1 PF00583.25 ORF43145 - 3.1e-10 40.3 0.0 1.4e-09 38.2 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Ank_3 PF13606.6 ORF43145 - 6.1e-10 38.5 0.0 7.4e-05 22.9 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_10 PF13673.7 ORF43145 - 4.8e-08 33.0 0.0 1.1e-07 31.9 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ank_5 PF13857.6 ORF43145 - 1.1e-06 28.8 0.0 7.2e-05 23.0 0.0 2.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_7 PF13508.7 ORF43145 - 1.4e-05 25.5 0.0 0.0001 22.7 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF43145 - 2.1e-05 24.4 0.0 0.0088 16.0 0.0 3.2 3 0 0 3 3 3 1 FR47-like protein Ank PF00023.30 ORF43145 - 0.001 19.4 0.0 0.015 15.7 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Acetyltransf_CG PF14542.6 ORF43145 - 0.011 15.9 0.0 0.029 14.5 0.0 1.7 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 ORF43145 - 0.065 13.9 0.1 0.6 10.8 0.0 2.2 2 1 0 2 2 2 0 Acetyltransferase (GNAT) domain TMEM52 PF14979.6 ORF39413 - 0.043 13.7 1.4 0.43 10.5 0.0 2.6 2 0 0 2 2 2 0 Transmembrane 52 PRIMA1 PF16101.5 ORF39413 - 0.1 12.7 0.2 0.1 12.7 0.2 2.2 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 Shisa PF13908.6 ORF39413 - 0.26 11.5 0.9 1.5 9.0 0.2 2.4 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator Flu_M2 PF00599.17 ORF39413 - 0.3 11.2 0.1 0.3 11.2 0.1 3.2 3 0 0 3 3 3 0 Influenza Matrix protein (M2) Ni_hydr_CYTB PF01292.20 ORF39413 - 0.41 10.2 10.2 0.5 10.0 0.3 3.3 2 1 0 2 2 2 0 Prokaryotic cytochrome b561 TRP PF06011.12 ORF39413 - 0.85 8.3 38.5 0.096 11.4 33.3 2.0 2 1 0 2 2 2 0 Transient receptor potential (TRP) ion channel DUF2339 PF10101.9 ORF39413 - 1.5 7.3 7.2 0.69 8.4 2.4 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2339) OAD_gamma PF04277.13 ORF39413 - 8 7.1 0.0 8 7.1 0.0 3.5 4 0 0 4 4 4 0 Oxaloacetate decarboxylase, gamma chain PMT PF02366.18 ORF29898 - 4.8e-19 68.9 9.0 4.8e-19 68.9 9.0 3.2 4 0 0 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase RRM_1 PF00076.22 ORF29701 - 2.9e-39 132.7 0.0 1.7e-16 59.8 0.0 3.2 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF29701 - 7.1e-07 29.3 0.0 0.0073 16.4 0.0 3.5 3 1 0 3 3 3 1 RNA recognition motif RRM_5 PF13893.6 ORF29701 - 2.7e-06 27.0 0.0 0.055 13.1 0.0 3.1 2 1 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF29701 - 7.2e-06 26.0 0.0 0.023 14.7 0.0 2.5 2 0 0 2 2 2 2 RNA binding motif Nup35_RRM_2 PF14605.6 ORF29701 - 0.00023 21.1 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 2 Nup53/35/40-type RNA recognition motif BRAP2 PF07576.12 ORF29701 - 0.024 14.8 0.0 0.81 9.9 0.0 2.4 2 0 0 2 2 2 0 BRCA1-associated protein 2 FAST_1 PF06743.15 ORF29623 - 1.5e-06 28.1 2.6 7.8 6.5 0.0 5.9 5 1 1 6 6 6 3 FAST kinase-like protein, subdomain 1 LRR_9 PF14580.6 ORF29623 - 0.04 13.4 0.1 0.082 12.4 0.1 1.6 1 0 0 1 1 1 0 Leucine-rich repeat Pkinase PF00069.25 ORF29326 - 1.2e-24 87.1 0.0 2e-24 86.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29326 - 2.8e-19 69.4 0.0 9.1e-19 67.7 0.0 1.8 1 1 0 1 1 1 1 Protein tyrosine kinase HALZ PF02183.18 ORF29326 - 0.026 14.7 0.1 0.049 13.8 0.1 1.4 1 0 0 1 1 1 0 Homeobox associated leucine zipper CCCAP PF15964.5 ORF29326 - 0.19 10.0 0.1 0.27 9.5 0.1 1.1 1 0 0 1 1 1 0 Centrosomal colon cancer autoantigen protein family Pkinase_fungal PF17667.1 ORF29326 - 0.26 10.0 0.0 0.34 9.6 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase SET PF00856.28 ORF27836 - 0.00047 20.6 0.0 0.0018 18.7 0.0 1.9 2 0 0 2 2 2 1 SET domain DUF3618 PF12277.8 ORF27836 - 0.2 11.9 2.2 0.38 11.0 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3618) CAMSAP_CC1 PF17095.5 ORF27836 - 9.5 6.2 8.2 26 4.8 4.6 2.9 2 1 1 3 3 3 0 Spectrin-binding region of Ca2+-Calmodulin Pkinase PF00069.25 ORF22376 - 2.8e-43 148.2 0.1 5e-43 147.4 0.1 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22376 - 1.2e-20 73.9 0.0 1.8e-20 73.3 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF22376 - 0.00016 21.1 0.0 0.00022 20.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF22376 - 0.0027 16.7 0.0 0.0041 16.1 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF22376 - 0.023 14.0 0.0 0.044 13.1 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Cactin_mid PF10312.9 ORF22376 - 0.1 12.3 2.6 0.87 9.3 0.2 2.3 2 1 0 2 2 2 0 Conserved mid region of cactin Herpes_UL14 PF03580.14 ORF22376 - 0.21 11.9 1.4 0.51 10.6 1.4 1.6 1 0 0 1 1 1 0 Herpesvirus UL14-like protein AA_permease_2 PF13520.6 ORF106819 - 3.8e-27 95.2 46.5 3.8e-27 95.2 46.5 1.8 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.21 ORF106819 - 1.7e-22 79.7 46.2 3.2e-22 78.8 46.2 1.4 1 1 0 1 1 1 1 Amino acid permease YmcE_antitoxin PF15939.5 NODE_13430_length_1210_cov_106.288511_g10064_i0reverse_frame_1 - 0.023 14.8 0.3 0.052 13.7 0.3 1.6 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system Zip PF02535.22 NODE_13324_length_1214_cov_204.251060_g9983_i0reverse_frame_3 - 2.3 7.4 4.2 4 6.6 4.2 1.4 1 0 0 1 1 1 0 ZIP Zinc transporter CLN3 PF02487.17 NODE_13324_length_1214_cov_204.251060_g9983_i0reverse_frame_2 - 5.4 6.0 7.5 1.8 7.5 1.4 2.2 2 0 0 2 2 2 0 CLN3 protein Pkinase PF00069.25 ORF9962 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9962 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF9962 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF9962 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF9962 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF9962 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF9962 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Citrate_synt PF00285.21 ORF97882 - 7.2e-92 308.2 0.0 8.2e-92 308.0 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Pkinase PF00069.25 ORF97298 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF97298 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF97298 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF97298 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF97298 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF97298 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF97298 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Dynein_C PF18199.1 ORF96879 - 2.5e-109 365.2 0.0 2.9e-109 365.0 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF96879 - 3.8e-30 104.8 0.0 9.6e-30 103.6 0.0 1.7 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Pkinase PF00069.25 ORF94385 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94385 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF94385 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF94385 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF94385 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF94385 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF94385 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF91866 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF91866 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF91866 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF91866 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF91866 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF91866 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF91866 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Fringe PF02434.16 ORF87844 - 0.089 12.2 0.1 0.19 11.2 0.0 1.5 2 0 0 2 2 2 0 Fringe-like Ank_2 PF12796.7 ORF87104 - 4e-16 59.4 0.1 5.4e-06 26.9 0.1 3.8 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF87104 - 1.2e-14 54.4 0.1 4.2e-05 24.0 0.0 5.2 4 1 0 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF87104 - 4.3e-11 42.8 0.3 0.00069 19.9 0.0 5.0 5 0 0 5 5 5 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF87104 - 6.8e-07 29.1 3.0 0.013 16.0 0.0 5.3 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF87104 - 6.9e-06 26.3 0.1 0.019 15.4 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Pkinase PF00069.25 ORF84846 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF84846 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF84846 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF84846 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF84846 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF84846 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF84846 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Caldesmon PF02029.15 ORF8455 - 0.00068 18.5 5.1 0.00071 18.5 5.1 1.1 1 0 0 1 1 1 1 Caldesmon RPN7 PF10602.9 ORF8455 - 0.44 10.2 8.8 0.97 9.1 7.5 2.1 2 0 0 2 2 2 0 26S proteasome subunit RPN7 Exonuc_VII_L PF02601.15 ORF8455 - 0.53 9.8 7.6 0.82 9.2 7.6 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4407 PF14362.6 ORF8455 - 1.6 8.0 6.4 2.9 7.2 6.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Remorin_C PF03763.13 ORF8455 - 1.8 8.5 14.5 5.6 6.9 14.5 1.9 1 1 0 1 1 1 0 Remorin, C-terminal region DUF1700 PF08006.11 ORF8455 - 2.4 7.7 5.1 6.1 6.3 5.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Pkinase PF00069.25 ORF80211 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF80211 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF80211 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF80211 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF80211 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF80211 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF80211 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF73271 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73271 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF73271 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF73271 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF73271 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF73271 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF73271 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF72626 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF72626 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF72626 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF72626 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF72626 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF72626 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF72626 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Hydrolase_4 PF12146.8 ORF71510 - 2.3e-07 30.4 0.0 4e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF71510 - 0.00029 20.6 0.1 0.0005 19.8 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF818 PF05677.12 ORF71510 - 0.00058 18.9 0.0 0.00074 18.6 0.0 1.2 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Abhydrolase_6 PF12697.7 ORF71510 - 0.003 18.2 0.0 0.004 17.8 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 ORF71510 - 0.13 11.9 0.0 0.22 11.1 0.0 1.4 1 1 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Pkinase PF00069.25 ORF66537 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF66537 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF66537 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF66537 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF66537 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF66537 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF66537 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF65742 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF65742 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF65742 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF65742 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF65742 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF65742 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF65742 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Hydrolase_4 PF12146.8 ORF64957 - 2.3e-07 30.4 0.0 4e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF64957 - 0.00029 20.6 0.1 0.0005 19.8 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF818 PF05677.12 ORF64957 - 0.00058 18.9 0.0 0.00074 18.6 0.0 1.2 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Abhydrolase_6 PF12697.7 ORF64957 - 0.003 18.2 0.0 0.004 17.8 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 ORF64957 - 0.13 11.9 0.0 0.22 11.1 0.0 1.4 1 1 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) DUF948 PF06103.11 ORF61664 - 0.0025 18.1 0.7 0.0086 16.3 0.3 2.2 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) Med9 PF07544.13 ORF61664 - 0.014 15.5 1.2 2.4 8.3 0.1 3.4 1 1 2 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 DUF725 PF05267.12 ORF61664 - 0.016 15.2 0.2 0.041 13.9 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF725) WASH_WAHD PF11945.8 ORF61664 - 0.017 14.7 2.7 1.2 8.5 0.3 2.2 1 1 0 2 2 2 0 WAHD domain of WASH complex Snapin_Pallidin PF14712.6 ORF61664 - 0.038 14.4 0.3 0.038 14.4 0.3 2.6 3 1 0 3 3 2 0 Snapin/Pallidin Baculo_PEP_C PF04513.12 ORF61664 - 0.082 13.0 0.4 1.6 8.8 0.1 2.2 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus BLOC1_2 PF10046.9 ORF61664 - 0.14 12.5 3.0 0.43 10.9 1.4 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SHE3 PF17078.5 ORF61664 - 0.14 11.9 5.3 0.2 11.3 5.3 1.3 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 DUF1664 PF07889.12 ORF61664 - 0.16 12.0 6.7 0.34 10.9 2.5 2.9 2 2 0 3 3 3 0 Protein of unknown function (DUF1664) ING PF12998.7 ORF61664 - 0.34 11.5 6.4 0.089 13.4 2.0 2.3 4 0 0 4 4 1 0 Inhibitor of growth proteins N-terminal histone-binding Spore_III_AF PF09581.10 ORF61664 - 0.47 10.5 4.5 0.21 11.6 2.1 1.6 2 0 0 2 2 2 0 Stage III sporulation protein AF (Spore_III_AF) Fmp27_WPPW PF10359.9 ORF61664 - 0.88 8.3 7.3 0.56 9.0 5.2 1.5 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF16 PF01519.16 ORF61664 - 1.8 9.1 4.9 1.8 9.1 1.2 2.5 2 1 1 3 3 3 0 Protein of unknown function DUF16 Jnk-SapK_ap_N PF09744.9 ORF61664 - 1.9 8.7 13.3 0.3 11.3 7.7 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DUF1043 PF06295.12 ORF61664 - 2.8 7.9 6.5 0.91 9.5 0.6 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1043) UPF0242 PF06785.11 ORF61664 - 6.1 6.9 11.6 7.5 6.6 3.0 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Cytochrom_B562 PF07361.11 ORF61664 - 8.3 7.1 11.4 7.4 7.3 0.9 2.9 2 1 1 3 3 3 0 Cytochrome b562 7TMR-HDED PF07697.11 ORF61664 - 9.3 6.3 9.2 4.5e+02 0.8 9.2 2.3 1 1 0 1 1 1 0 7TM-HD extracellular Pkinase PF00069.25 ORF60805 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60805 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF60805 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF60805 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF60805 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF60805 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF60805 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF59639 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF59639 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF59639 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF59639 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF59639 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF59639 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF59639 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF58844 - 5.1e-45 153.9 0.0 7.9e-45 153.3 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58844 - 4.2e-22 78.7 0.1 5.9e-22 78.2 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_5 PF13202.6 ORF58844 - 6.1e-19 66.6 5.5 6.6e-06 25.4 0.1 4.0 4 0 0 4 4 4 3 EF hand EF-hand_1 PF00036.32 ORF58844 - 3.1e-18 63.9 3.7 0.0001 21.6 0.2 4.3 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF58844 - 1e-16 59.3 3.2 6.7e-05 22.5 0.0 4.3 5 0 0 5 5 5 3 EF-hand domain EF-hand_7 PF13499.6 ORF58844 - 3.5e-16 59.4 7.0 2.6e-09 37.4 0.2 3.4 2 2 1 3 3 3 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF58844 - 3.2e-11 42.9 3.0 0.0023 17.8 0.4 4.6 5 0 0 5 5 5 3 EF-hand domain pair EF-hand_4 PF12763.7 ORF58844 - 1.7e-05 24.7 0.1 0.097 12.6 0.1 3.0 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF58844 - 5.1e-05 23.6 0.0 0.018 15.3 0.0 2.6 1 1 2 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF58844 - 0.0069 16.6 0.0 0.64 10.2 0.0 2.6 3 0 0 3 3 3 1 Dockerin type I domain Pkinase_fungal PF17667.1 ORF58844 - 0.0081 15.0 0.0 0.013 14.3 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Flu_C_NS2 PF03555.14 ORF58844 - 0.1 12.8 0.2 0.36 11.0 0.0 2.0 2 0 0 2 2 2 0 Influenza C non-structural protein (NS2) YrbL-PhoP_reg PF10707.9 ORF58844 - 0.13 11.8 0.0 0.33 10.5 0.0 1.6 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Vesiculo_matrix PF06326.12 ORF58844 - 0.13 12.0 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Vesiculovirus matrix protein Pkinase PF00069.25 ORF55924 - 1.4e-36 126.3 0.0 2e-36 125.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF55924 - 4.3e-20 72.1 0.0 6e-20 71.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF55924 - 0.16 11.9 1.3 8.2 6.3 0.0 2.7 3 1 1 4 4 4 0 Phosphotransferase enzyme family UDPGT PF00201.18 ORF54751 - 1e-16 60.8 0.0 2.1e-16 59.8 0.0 1.4 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF54751 - 3e-07 30.6 0.0 5.1e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Pkinase PF00069.25 ORF53479 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF53479 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF53479 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF53479 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF53479 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF53479 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF53479 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Cation_efflux PF01545.21 ORF49293 - 1.5e-28 99.9 9.8 1.9e-28 99.6 9.8 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 ORF49293 - 1.8e-08 34.4 0.0 3.3e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Cation_ATPase_C PF00689.21 ORF47839 - 6.1e-48 162.9 3.8 8.2e-48 162.5 3.8 1.2 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF47839 - 1.4e-11 45.1 1.0 1.2e-10 42.0 1.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF47839 - 7.2e-05 22.6 1.0 0.00011 22.1 1.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase XAF1_C PF18608.1 ORF47839 - 0.21 11.2 0.1 0.38 10.4 0.1 1.3 1 0 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain TMEM208_SND2 PF05620.11 ORF47839 - 2.4 7.9 4.5 3.1 7.6 0.1 2.5 3 0 0 3 3 3 0 SRP-independent targeting protein 2/TMEM208 Pkinase PF00069.25 ORF45482 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45482 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF45482 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF45482 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF45482 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF45482 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF45482 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF45338 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45338 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF45338 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF45338 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF45338 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF45338 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF45338 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF42181 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42181 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF42181 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF42181 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF42181 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF42181 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF42181 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Prok-RING_1 PF14446.6 ORF41632 - 0.0072 16.2 1.0 0.0072 16.2 1.0 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Zf_RING PF16744.5 ORF41632 - 0.025 14.7 4.0 0.07 13.3 0.6 2.3 2 0 0 2 2 2 0 KIAA1045 RING finger zf-RING_2 PF13639.6 ORF41632 - 0.036 14.4 4.0 0.036 14.4 4.0 2.4 2 0 0 2 2 2 0 Ring finger domain OrfB_Zn_ribbon PF07282.11 ORF41632 - 0.14 12.1 6.6 0.42 10.6 0.9 2.4 2 0 0 2 2 2 0 Putative transposase DNA-binding domain FANCL_C PF11793.8 ORF41632 - 0.68 10.1 9.1 0.083 13.1 2.7 2.2 2 0 0 2 2 2 0 FANCL C-terminal domain C1_1 PF00130.22 ORF41632 - 0.7 9.8 10.3 0.52 10.2 5.0 2.4 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD_4 PF16866.5 ORF41632 - 1.3 9.2 10.9 9.3 6.4 0.9 3.2 2 1 0 2 2 2 0 PHD-finger zf-ANAPC11 PF12861.7 ORF41632 - 2 8.5 6.9 0.64 10.1 1.1 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF41385 - 0.0072 16.2 1.0 0.0072 16.2 1.0 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Zf_RING PF16744.5 ORF41385 - 0.025 14.7 4.0 0.07 13.3 0.6 2.3 2 0 0 2 2 2 0 KIAA1045 RING finger zf-RING_2 PF13639.6 ORF41385 - 0.036 14.4 4.0 0.036 14.4 4.0 2.4 2 0 0 2 2 2 0 Ring finger domain OrfB_Zn_ribbon PF07282.11 ORF41385 - 0.14 12.1 6.6 0.42 10.6 0.9 2.4 2 0 0 2 2 2 0 Putative transposase DNA-binding domain FANCL_C PF11793.8 ORF41385 - 0.68 10.1 9.1 0.083 13.1 2.7 2.2 2 0 0 2 2 2 0 FANCL C-terminal domain C1_1 PF00130.22 ORF41385 - 0.7 9.8 10.3 0.52 10.2 5.0 2.4 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD_4 PF16866.5 ORF41385 - 1.3 9.2 10.9 9.3 6.4 0.9 3.2 2 1 0 2 2 2 0 PHD-finger zf-ANAPC11 PF12861.7 ORF41385 - 2 8.5 6.9 0.64 10.1 1.1 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger TAXi_C PF14541.6 ORF36360 - 1.1e-19 70.7 0.0 5e-19 68.6 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF36360 - 1.3e-18 67.5 0.0 1.7e-18 67.1 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Ferrochelatase PF00762.19 ORF33889 - 1.6e-92 310.0 0.0 1.9e-92 309.7 0.0 1.1 1 0 0 1 1 1 1 Ferrochelatase Phage_gp53 PF11246.8 ORF33889 - 0.019 14.7 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 Base plate wedge protein 53 DnaG_DnaB_bind PF08278.11 ORF33889 - 0.019 15.6 0.0 0.18 12.4 0.0 2.2 2 0 0 2 2 2 0 DNA primase DnaG DnaB-binding CbiX PF01903.17 ORF33889 - 0.11 12.9 0.0 11 6.5 0.0 2.3 2 0 0 2 2 2 0 CbiX Pkinase PF00069.25 ORF24379 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24379 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF24379 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF24379 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF24379 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF24379 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF24379 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF21082 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF21082 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF21082 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF21082 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF21082 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF21082 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF21082 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Ribosomal_L3 PF00297.22 ORF18717 - 7.7e-165 548.3 12.7 8.8e-165 548.1 12.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 M16C_assoc PF08367.11 ORF18145 - 5e-10 38.9 0.5 1e-09 37.9 0.5 1.5 1 0 0 1 1 1 1 Peptidase M16C associated Peptidase_M16_C PF05193.21 ORF18145 - 0.00014 21.9 0.7 0.0011 19.1 0.1 2.5 3 0 0 3 3 3 1 Peptidase M16 inactive domain Pkinase PF00069.25 ORF17798 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF17798 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF17798 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF17798 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF17798 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF17798 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF17798 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Prok-RING_1 PF14446.6 ORF16361 - 0.0072 16.2 1.0 0.0072 16.2 1.0 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Zf_RING PF16744.5 ORF16361 - 0.025 14.7 4.0 0.07 13.3 0.6 2.3 2 0 0 2 2 2 0 KIAA1045 RING finger zf-RING_2 PF13639.6 ORF16361 - 0.036 14.4 4.0 0.036 14.4 4.0 2.4 2 0 0 2 2 2 0 Ring finger domain OrfB_Zn_ribbon PF07282.11 ORF16361 - 0.14 12.1 6.6 0.42 10.6 0.9 2.4 2 0 0 2 2 2 0 Putative transposase DNA-binding domain FANCL_C PF11793.8 ORF16361 - 0.68 10.1 9.1 0.083 13.1 2.7 2.2 2 0 0 2 2 2 0 FANCL C-terminal domain C1_1 PF00130.22 ORF16361 - 0.7 9.8 10.3 0.52 10.2 5.0 2.4 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD_4 PF16866.5 ORF16361 - 1.3 9.2 10.9 9.3 6.4 0.9 3.2 2 1 0 2 2 2 0 PHD-finger zf-ANAPC11 PF12861.7 ORF16361 - 2 8.5 6.9 0.64 10.1 1.1 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger cNMP_binding PF00027.29 ORF15965 - 2.8e-05 24.1 0.0 5.7e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain OKR_DC_1 PF01276.20 ORF15483 - 9e-88 294.8 0.0 1.1e-87 294.5 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.15 ORF15483 - 5.1e-50 169.2 0.4 1.9e-49 167.3 0.1 2.0 2 0 0 2 2 2 1 Orn/Lys/Arg decarboxylase, C-terminal domain Hydrolase_4 PF12146.8 ORF11656 - 2.3e-07 30.4 0.0 4e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF11656 - 0.00029 20.6 0.1 0.0005 19.8 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF818 PF05677.12 ORF11656 - 0.00058 18.9 0.0 0.00074 18.6 0.0 1.2 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Abhydrolase_6 PF12697.7 ORF11656 - 0.003 18.2 0.0 0.004 17.8 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 ORF11656 - 0.13 11.9 0.0 0.22 11.1 0.0 1.4 1 1 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Pkinase PF00069.25 ORF11523 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF11523 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF11523 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF11523 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF11523 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF11523 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF11523 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF111288 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF111288 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF111288 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF111288 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF111288 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF111288 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF111288 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF109038 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF109038 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF109038 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF109038 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF109038 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF109038 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF109038 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Prok-RING_1 PF14446.6 ORF106070 - 0.0072 16.2 1.0 0.0072 16.2 1.0 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Zf_RING PF16744.5 ORF106070 - 0.025 14.7 4.0 0.07 13.3 0.6 2.3 2 0 0 2 2 2 0 KIAA1045 RING finger zf-RING_2 PF13639.6 ORF106070 - 0.036 14.4 4.0 0.036 14.4 4.0 2.4 2 0 0 2 2 2 0 Ring finger domain OrfB_Zn_ribbon PF07282.11 ORF106070 - 0.14 12.1 6.6 0.42 10.6 0.9 2.4 2 0 0 2 2 2 0 Putative transposase DNA-binding domain FANCL_C PF11793.8 ORF106070 - 0.68 10.1 9.1 0.083 13.1 2.7 2.2 2 0 0 2 2 2 0 FANCL C-terminal domain C1_1 PF00130.22 ORF106070 - 0.7 9.8 10.3 0.52 10.2 5.0 2.4 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD_4 PF16866.5 ORF106070 - 1.3 9.2 10.9 9.3 6.4 0.9 3.2 2 1 0 2 2 2 0 PHD-finger zf-ANAPC11 PF12861.7 ORF106070 - 2 8.5 6.9 0.64 10.1 1.1 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger ATP-grasp_3 PF02655.14 ORF10526 - 1.4e-06 28.4 0.0 4.6e-06 26.8 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain PGM1_C PF18105.1 ORF10526 - 0.0032 17.0 0.0 0.008 15.7 0.0 1.7 1 0 0 1 1 1 1 PGM1 C-terminal domain Pkinase PF00069.25 ORF102342 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF102342 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF102342 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF102342 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF102342 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF102342 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF102342 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF101461 - 9.1e-77 258.0 0.2 1.6e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101461 - 1.4e-47 162.2 0.0 2.3e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF101461 - 4.4e-09 36.8 0.9 1.2e-08 35.4 0.9 1.8 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF101461 - 2.9e-07 30.1 0.0 5.1e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF101461 - 0.0007 19.0 0.0 0.015 14.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF101461 - 0.011 14.5 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF101461 - 0.22 11.4 0.0 0.54 10.1 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family DUF1497 PF07384.11 NODE_13397_length_1211_cov_111.285714_g10037_i0forward_frame_3 - 0.1 13.0 3.0 0.2 12.1 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1497) DUF2808 PF10989.8 NODE_13371_length_1212_cov_102.636364_g10018_i0reverse_frame_3 - 0.0017 18.3 3.6 0.21 11.5 0.7 2.9 2 1 1 3 3 3 2 Protein of unknown function (DUF2808) DUF5496 PF17600.2 NODE_13371_length_1212_cov_102.636364_g10018_i0reverse_frame_2 - 0.51 10.4 5.5 2.5 8.2 0.2 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5496) p450 PF00067.22 ORF98684 - 1.8e-49 168.8 0.0 1e-46 159.7 0.0 2.0 2 0 0 2 2 2 2 Cytochrome P450 DegQ PF08181.11 ORF96571 - 0.13 12.4 4.3 5.1 7.3 0.2 2.9 3 0 0 3 3 3 0 DegQ (SacQ) family SecD-TM1 PF13721.6 ORF96571 - 0.18 12.2 3.5 0.24 11.9 1.0 2.3 1 1 1 2 2 2 0 SecD export protein N-terminal TM region V-SNARE_C PF12352.8 ORF96571 - 0.69 10.2 7.6 0.76 10.1 0.9 2.9 2 1 0 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus DUF1664 PF07889.12 ORF96571 - 4.1 7.5 8.5 2.3 8.3 3.9 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) TSC22 PF01166.18 ORF96571 - 4.8 7.6 11.3 4.9 7.5 0.0 4.0 4 0 0 4 4 4 0 TSC-22/dip/bun family FapA PF03961.13 ORF96571 - 5.3 5.5 16.1 0.17 10.5 5.9 2.2 2 0 0 2 2 2 0 Flagellar Assembly Protein A Phage_integrase PF00589.22 ORF85605 - 0.024 14.4 0.0 0.28 11.0 0.0 2.2 1 1 0 1 1 1 0 Phage integrase family tRNA-synt_2 PF00152.20 ORF78439 - 1.4e-81 274.0 0.0 1.6e-81 273.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF78439 - 0.00016 21.2 0.1 0.0022 17.5 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) F_bP_aldolase PF01116.20 ORF78439 - 0.039 13.4 0.0 0.064 12.7 0.0 1.2 1 0 0 1 1 1 0 Fructose-bisphosphate aldolase class-II Peptidase_S11 PF00768.20 ORF78273 - 2e-101 338.5 0.1 2.6e-101 338.1 0.1 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase PBP5_C PF07943.13 ORF78273 - 1.1e-24 86.5 0.0 1.9e-24 85.7 0.0 1.4 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain Beta-lactamase2 PF13354.6 ORF78273 - 7.9e-06 25.6 0.0 1.2e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family Dr_adhesin PF12393.8 ORF78273 - 0.69 10.3 2.9 1.9 8.9 2.9 1.8 1 0 0 1 1 1 0 Dr family adhesin TPR_2 PF07719.17 ORF75923 - 0.18 12.0 4.0 3.2 8.1 0.0 3.5 3 1 1 4 4 4 0 Tetratricopeptide repeat Sulfotransfer_1 PF00685.27 ORF75242 - 3.5e-11 43.1 0.7 2.5e-10 40.3 0.7 2.1 1 1 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF75242 - 8.7e-09 36.1 0.0 2.1e-06 28.3 0.0 2.8 3 0 0 3 3 3 2 Sulfotransferase family Peptidase_M16_C PF05193.21 ORF64216 - 3e-15 56.7 0.0 5.2e-15 55.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16_M PF16187.5 ORF64216 - 4e-12 46.0 0.6 4e-12 46.0 0.6 1.6 2 0 0 2 2 2 1 Middle or third domain of peptidase_M16 CI-B14_5a PF07347.12 ORF64216 - 0.04 13.8 0.0 0.094 12.6 0.0 1.6 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) ALIX_LYPXL_bnd PF13949.6 ORF64216 - 0.26 10.5 2.0 0.51 9.6 0.3 1.9 2 0 0 2 2 2 0 ALIX V-shaped domain binding to HIV FAD_binding_3 PF01494.19 ORF5503 - 1.8e-11 43.9 1.0 1e-10 41.4 1.0 1.9 1 1 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF5503 - 0.012 14.6 0.0 0.32 10.0 0.0 2.1 2 0 0 2 2 2 0 Squalene epoxidase cobW PF02492.19 ORF54662 - 2.2e-59 200.0 2.2 2.9e-59 199.6 2.2 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF54662 - 1.3e-18 66.7 0.0 2.6e-18 65.7 0.0 1.5 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 ORF54662 - 0.00059 19.8 0.1 0.23 11.3 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 ORF54662 - 0.001 18.6 3.9 0.0043 16.6 3.7 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF54662 - 0.011 15.8 1.2 0.13 12.4 1.2 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase ATPase_2 PF01637.18 ORF54662 - 0.021 14.7 0.0 0.04 13.8 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_16 PF13191.6 ORF54662 - 0.031 14.6 0.1 0.053 13.9 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 ORF54662 - 0.084 12.9 0.0 0.19 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 ORF54662 - 0.09 12.7 0.4 0.28 11.1 0.4 1.8 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B TsaE PF02367.17 ORF54662 - 0.1 12.6 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Viral_helicase1 PF01443.18 ORF54662 - 0.12 12.1 0.0 0.25 11.0 0.0 1.6 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 ORF54662 - 0.12 12.6 0.0 0.29 11.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF54662 - 0.12 12.1 0.0 0.34 10.7 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 ORF54662 - 0.15 12.0 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_23 PF13476.6 ORF54662 - 0.94 9.9 3.7 2.3 8.7 3.7 1.9 1 1 0 1 1 1 0 AAA domain MbtH PF03621.13 ORF4426 - 0.0033 16.8 1.2 0.25 10.8 0.0 3.3 3 0 0 3 3 3 1 MbtH-like protein RicinB_lectin_2 PF14200.6 ORF4426 - 0.0041 17.8 0.0 1 10.1 0.0 3.4 2 1 3 5 5 5 2 Ricin-type beta-trefoil lectin domain-like DUF1619 PF07773.11 ORF3773 - 5.1e-14 52.9 0.0 1.8e-09 38.0 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1619) Ank_2 PF12796.7 ORF33781 - 1.4e-17 64.0 0.6 5.5e-08 33.3 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF33781 - 5.8e-13 49.1 4.7 6.4e-05 23.4 0.2 5.8 3 1 3 6 6 6 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF33781 - 3.2e-11 42.4 1.1 5.7e-05 23.2 0.0 5.0 4 0 0 4 4 4 2 Ankyrin repeat Ank PF00023.30 ORF33781 - 5.8e-11 42.3 2.0 0.00085 19.7 0.0 4.8 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF33781 - 2.3e-08 34.1 6.1 0.00059 20.1 0.1 5.0 3 1 2 5 5 5 2 Ankyrin repeats (many copies) DUF3447 PF11929.8 ORF33781 - 0.01 15.8 0.0 0.83 9.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3447) NusB PF01029.18 ORF32238 - 0.074 13.3 0.3 0.14 12.4 0.3 1.4 1 0 0 1 1 1 0 NusB family Herpes_LMP1 PF05297.11 ORF32238 - 2.5 7.2 7.0 4.2 6.5 7.0 1.3 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Exo_endo_phos PF03372.23 ORF31760 - 5.4e-22 78.5 0.1 1.4e-21 77.1 0.1 1.6 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family CC2-LZ PF16516.5 ORF26029 - 0.0099 16.2 5.3 0.0099 16.2 5.3 6.0 3 2 3 6 6 6 3 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Tnp_22_trimer PF17489.2 ORF26029 - 0.06 13.3 1.2 0.06 13.3 1.2 4.2 4 0 0 4 4 4 0 L1 transposable element trimerization domain DUF4041 PF13250.6 ORF26029 - 0.15 11.9 5.1 1.3 9.0 0.6 3.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4041) QIL1 PF15884.5 ORF26029 - 0.22 12.2 4.7 0.74 10.4 0.2 3.5 3 0 0 3 3 3 0 MICOS complex subunit MIC13, QIL1 KIF1B PF12423.8 ORF26029 - 1.9 9.0 8.8 2.4 8.7 1.2 3.4 3 0 0 3 3 3 0 Kinesin protein 1B Fib_alpha PF08702.10 ORF26029 - 4.4 7.5 65.4 0.48 10.6 14.3 4.6 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family Glyco_hydro_20 PF00728.22 ORF25785 - 5.6e-95 318.7 0.0 6.9e-95 318.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain MFS_1 PF07690.16 ORF18064 - 7.1e-41 140.3 32.5 7.1e-41 140.3 32.5 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily OATP PF03137.20 ORF18064 - 0.00028 19.3 0.2 0.00055 18.3 0.2 1.6 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family PP2C PF00481.21 ORF17982 - 1.2e-38 133.3 0.1 3.2e-33 115.4 0.0 2.1 2 0 0 2 2 2 2 Protein phosphatase 2C Pkinase PF00069.25 ORF11274 - 1.2e-52 178.9 0.0 1.6e-52 178.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF11274 - 2.1e-22 79.6 0.0 2.8e-22 79.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF11274 - 7.6e-08 32.0 0.0 1e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF11274 - 0.00096 18.0 0.0 0.0015 17.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF11274 - 0.013 14.5 0.0 0.017 14.1 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 ORF11274 - 0.019 14.3 0.0 0.029 13.7 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF11274 - 0.19 11.7 0.0 0.4 10.6 0.0 1.5 1 1 0 1 1 1 0 Phosphotransferase enzyme family GTP-bdg_N PF13167.6 ORF106656 - 6.2e-31 106.9 0.0 1.7e-30 105.5 0.0 1.8 2 0 0 2 2 1 1 GTP-binding GTPase N-terminal GTP-bdg_M PF16360.5 ORF106656 - 3e-29 101.4 11.4 3e-29 101.4 11.4 1.8 2 0 0 2 2 1 1 GTP-binding GTPase Middle Region MMR_HSR1 PF01926.23 ORF106656 - 3.2e-22 78.8 0.1 1.2e-21 76.9 0.1 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF106656 - 5.3e-08 32.5 0.0 8.5e-08 31.9 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF106656 - 1.6e-06 28.1 0.1 0.05 13.5 0.1 2.3 2 0 0 2 2 2 2 RsgA GTPase Arf PF00025.21 ORF106656 - 1.4e-05 24.6 0.7 8.9e-05 22.0 0.7 2.0 1 1 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF106656 - 3.5e-05 23.4 0.3 0.03 13.9 0.3 2.5 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 ORF106656 - 0.0022 18.0 0.0 0.0047 16.9 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Dynamin_N PF00350.23 ORF106656 - 0.0026 17.8 0.2 0.2 11.7 0.0 2.4 1 1 1 2 2 2 1 Dynamin family Roc PF08477.13 ORF106656 - 0.0027 17.9 0.1 0.99 9.6 0.0 2.3 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF106656 - 0.0035 17.1 0.3 0.014 15.2 0.1 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein cobW PF02492.19 ORF106656 - 0.0039 16.8 2.1 0.31 10.6 0.5 2.5 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain TniB PF05621.11 ORF106656 - 0.0045 16.4 0.1 0.014 14.8 0.1 1.8 2 0 0 2 2 2 1 Bacterial TniB protein SRPRB PF09439.10 ORF106656 - 0.0068 15.9 0.0 0.012 15.1 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF106656 - 0.022 14.3 0.0 0.067 12.8 0.0 1.8 1 1 0 1 1 1 0 Ras family ABC_tran PF00005.27 ORF106656 - 0.025 15.1 0.0 0.17 12.4 0.0 2.3 1 1 1 2 2 2 0 ABC transporter G-alpha PF00503.20 ORF106656 - 0.048 12.8 0.3 4.7 6.3 0.0 2.5 2 1 0 2 2 2 0 G-protein alpha subunit MnmE_helical PF12631.7 ORF106656 - 0.059 13.5 0.1 0.1 12.8 0.1 1.4 1 0 0 1 1 1 0 MnmE helical domain DUF4011 PF13195.6 ORF106656 - 0.11 12.4 0.1 0.29 11.1 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4011) Peptidase_M20 PF01546.28 ORF1051 - 9.4e-24 84.3 0.0 1.5e-23 83.5 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF1051 - 1.7e-17 63.3 0.0 3.2e-17 62.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Helitron_like_N PF14214.6 ORF100913 - 1.7e-15 57.8 0.0 6.1e-15 55.9 0.0 1.9 2 0 0 2 2 2 1 Helitron helicase-like domain at N-terminus Myb_DNA-binding PF00249.31 ORF9607 - 4.6e-13 49.1 3.8 1.7e-08 34.5 0.3 3.2 4 0 0 4 4 4 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF9607 - 9.4e-09 35.4 5.6 8.7e-06 25.9 0.5 3.5 4 0 0 4 4 4 2 Myb-like DNA-binding domain MFS_1 PF07690.16 ORF94655 - 5.8e-22 78.1 60.9 3.3e-17 62.4 24.6 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF94655 - 0.0019 17.1 34.9 0.19 10.5 13.4 3.2 2 1 1 3 3 3 3 Sugar (and other) transporter Ank_2 PF12796.7 ORF94544 - 7.6e-14 52.1 0.1 2.5e-13 50.4 0.0 1.9 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF94544 - 8.9e-12 44.1 0.3 0.00058 20.1 0.0 4.3 5 0 0 5 5 5 2 Ankyrin repeat Ank_4 PF13637.6 ORF94544 - 6.3e-11 42.6 0.3 2.2e-10 40.9 0.1 2.1 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Acetyltransf_1 PF00583.25 ORF94544 - 9e-09 35.6 0.0 1.9e-08 34.5 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Ank PF00023.30 ORF94544 - 5.7e-07 29.7 0.0 0.0056 17.1 0.0 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF94544 - 1e-06 28.9 0.1 0.00063 20.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_10 PF13673.7 ORF94544 - 4.1e-06 26.8 0.0 9e-06 25.7 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF94544 - 0.0003 21.1 0.0 0.00079 19.8 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF94544 - 0.00063 19.7 0.0 0.0014 18.5 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein DDE_Tnp_1 PF01609.21 ORF93764 - 7.3e-27 94.4 0.0 1.3e-26 93.6 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain HEPN_DZIP3 PF18738.1 ORF93764 - 0.043 13.6 0.0 0.11 12.2 0.0 1.7 1 0 0 1 1 1 0 DZIP3/ hRUL138-like HEPN Dimerisation PF08100.11 ORF93764 - 0.073 13.1 0.1 0.45 10.6 0.0 2.3 2 0 0 2 2 2 0 Dimerisation domain DUF1298 PF06974.13 ORF9356 - 6.6e-10 39.1 0.2 1.7e-09 37.8 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF9356 - 5.7e-08 32.8 0.0 8.7e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain SwrA PF17423.2 ORF9356 - 0.029 14.4 1.4 0.043 13.8 0.1 2.0 2 0 0 2 2 2 0 Swarming motility protein Hydrolase PF00702.26 ORF78727 - 4.5e-08 33.6 0.1 6.8e-08 33.1 0.1 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF78727 - 0.011 15.4 0.1 0.016 14.9 0.1 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase WES_acyltransf PF03007.16 ORF78078 - 2.3e-12 47.2 0.0 3.3e-12 46.7 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF78078 - 1e-07 32.0 0.5 1.7e-07 31.3 0.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) VWA_3 PF13768.6 ORF7654 - 4.4e-15 55.9 0.1 7.2e-15 55.3 0.1 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF7654 - 2.4e-10 41.0 0.2 4.1e-10 40.2 0.2 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF7654 - 8.4e-07 29.4 0.0 1.3e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 ORF7654 - 1.5e-06 27.8 1.3 2.3e-06 27.2 1.3 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein SH3_2 PF07653.17 ORF71118 - 1.8e-05 24.3 0.1 0.14 11.9 0.0 2.4 2 0 0 2 2 2 2 Variant SH3 domain WW PF00397.26 ORF71118 - 0.00027 20.9 9.0 0.00068 19.7 9.0 1.8 1 0 0 1 1 1 1 WW domain DDE_Tnp_1 PF01609.21 ORF707 - 7.3e-27 94.4 0.0 1.3e-26 93.6 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain HEPN_DZIP3 PF18738.1 ORF707 - 0.043 13.6 0.0 0.11 12.2 0.0 1.7 1 0 0 1 1 1 0 DZIP3/ hRUL138-like HEPN Dimerisation PF08100.11 ORF707 - 0.073 13.1 0.1 0.45 10.6 0.0 2.3 2 0 0 2 2 2 0 Dimerisation domain DUF4200 PF13863.6 ORF69856 - 0.0059 17.0 25.9 0.0059 17.0 25.9 4.9 2 2 2 4 4 4 1 Domain of unknown function (DUF4200) Pox_A_type_inc PF04508.12 ORF69856 - 0.0097 15.7 8.5 1.5 8.8 0.0 4.9 5 0 0 5 5 5 2 Viral A-type inclusion protein repeat APC_N_CC PF16689.5 ORF69856 - 0.077 13.1 12.3 10 6.3 0.2 4.6 4 0 0 4 4 4 0 Coiled-coil N-terminus of APC, dimerisation domain Golgin_A5 PF09787.9 ORF69856 - 0.78 9.1 55.3 0.22 10.9 31.7 3.1 2 1 1 3 3 3 0 Golgin subfamily A member 5 Fez1 PF06818.15 ORF69856 - 2.7 8.4 60.0 1 9.8 17.2 3.5 1 1 3 4 4 4 0 Fez1 Fib_alpha PF08702.10 ORF69856 - 4.1 7.6 24.8 1.3 9.3 0.5 4.2 2 2 3 5 5 5 0 Fibrinogen alpha/beta chain family MAD PF05557.13 ORF69856 - 4.7 5.4 54.2 0.4 9.0 33.1 3.0 2 1 1 3 3 3 0 Mitotic checkpoint protein TPR_2 PF07719.17 ORF67859 - 1.5e-18 65.3 3.1 5.9e-05 22.9 0.2 6.2 6 0 0 6 6 6 4 Tetratricopeptide repeat DUF1736 PF08409.11 ORF67859 - 2.6e-17 62.6 3.7 1.2e-16 60.4 0.5 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF1736) TPR_1 PF00515.28 ORF67859 - 2e-14 52.7 1.1 7.5e-05 22.4 0.1 5.8 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF67859 - 3e-11 42.6 0.4 0.0011 19.0 0.0 5.4 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF67859 - 2.5e-10 40.4 8.7 3.6e-05 23.8 1.6 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF67859 - 2.3e-09 37.4 17.8 0.00014 22.1 0.2 4.7 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 ORF67859 - 4.3e-08 32.7 4.5 0.039 13.6 0.2 4.4 4 1 1 5 5 5 3 TPR repeat TPR_17 PF13431.6 ORF67859 - 9.4e-07 28.8 6.0 1.3 9.6 0.1 5.2 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF67859 - 4.6e-06 27.0 22.4 0.009 16.8 1.4 6.2 4 2 2 6 6 6 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF67859 - 1.2e-05 25.9 26.3 0.0021 18.7 5.6 5.3 3 2 3 6 6 6 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF67859 - 0.00016 21.4 15.1 0.0073 16.1 1.2 5.0 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF67859 - 0.00096 19.6 10.1 1.1 10.1 0.3 4.6 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF67859 - 0.011 16.3 14.8 0.12 12.9 1.2 4.4 4 1 0 5 5 4 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF67859 - 0.021 15.4 13.6 0.036 14.7 0.3 5.6 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF67859 - 0.025 14.6 0.4 0.025 14.6 0.4 3.3 3 0 0 3 3 2 0 Tetratricopeptide repeat RACo_linker PF17650.1 ORF47868 - 0.0006 19.6 1.8 0.0021 17.9 0.1 2.6 3 0 0 3 3 3 1 RACo linker region Apolipoprotein PF01442.18 ORF47868 - 0.00079 19.3 6.5 0.1 12.5 2.0 3.0 2 1 0 2 2 2 2 Apolipoprotein A1/A4/E domain Lectin_N PF03954.14 ORF47868 - 0.0082 15.9 4.1 0.015 15.0 1.2 2.5 2 0 0 2 2 2 1 Hepatic lectin, N-terminal domain Tox-REase-9 PF15650.6 ORF47868 - 0.0088 16.3 3.3 0.081 13.2 0.2 3.4 3 0 0 3 3 3 1 Restriction endonuclease fold toxin 9 TMPIT PF07851.13 ORF47868 - 0.014 14.7 2.9 0.014 14.7 2.9 2.8 3 0 0 3 3 3 0 TMPIT-like protein DUF1664 PF07889.12 ORF47868 - 0.014 15.4 1.1 0.014 15.4 1.1 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Col_cuticle_N PF01484.17 ORF47868 - 0.05 13.7 3.2 13 6.0 0.0 3.8 2 1 1 3 3 3 0 Nematode cuticle collagen N-terminal domain Flg_hook PF02120.16 ORF47868 - 0.074 13.0 0.3 0.28 11.1 0.3 2.0 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK Ribosomal_S18 PF01084.20 ORF47868 - 0.11 12.7 0.2 1.7 9.0 0.1 2.7 2 0 0 2 2 2 0 Ribosomal protein S18 Baculo_PEP_C PF04513.12 ORF47868 - 0.16 12.0 11.8 0.86 9.6 1.2 3.2 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Val_tRNA-synt_C PF10458.9 ORF47868 - 0.18 12.1 2.6 8.6 6.7 0.0 3.6 3 0 0 3 3 2 0 Valyl tRNA synthetase tRNA binding arm G-gamma PF00631.22 ORF47868 - 0.26 11.3 0.1 0.26 11.3 0.1 3.0 4 0 0 4 4 4 0 GGL domain DUF883 PF05957.13 ORF47868 - 0.51 11.0 4.1 3.6 8.2 0.1 3.7 3 2 1 4 4 4 0 Bacterial protein of unknown function (DUF883) DUF4407 PF14362.6 ORF47868 - 1.3 8.3 5.0 5.1 6.4 4.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) SpoIISA_toxin PF14171.6 ORF47868 - 1.4 8.5 12.4 1 9.0 4.9 2.5 2 0 0 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system Lzipper-MIP1 PF14389.6 ORF47868 - 2.3 8.6 6.8 11 6.4 1.4 3.9 2 2 1 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 YtxH PF12732.7 ORF47868 - 3.1 8.4 11.6 35 5.0 1.2 4.3 3 1 0 3 3 3 0 YtxH-like protein DDE_Tnp_1 PF01609.21 ORF44724 - 7.3e-27 94.4 0.0 1.3e-26 93.6 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain HEPN_DZIP3 PF18738.1 ORF44724 - 0.043 13.6 0.0 0.11 12.2 0.0 1.7 1 0 0 1 1 1 0 DZIP3/ hRUL138-like HEPN Dimerisation PF08100.11 ORF44724 - 0.073 13.1 0.1 0.45 10.6 0.0 2.3 2 0 0 2 2 2 0 Dimerisation domain UQ_con PF00179.26 ORF42333 - 0.0064 16.1 0.4 0.019 14.6 0.0 1.9 2 0 0 2 2 2 1 Ubiquitin-conjugating enzyme RsmJ PF04378.13 ORF42333 - 0.099 11.8 0.1 0.17 11.1 0.1 1.5 1 0 0 1 1 1 0 Ribosomal RNA large subunit methyltransferase D, RlmJ RACo_linker PF17650.1 ORF41778 - 0.00062 19.6 1.8 0.0021 17.9 0.1 2.6 3 0 0 3 3 3 1 RACo linker region Apolipoprotein PF01442.18 ORF41778 - 0.00079 19.4 6.5 0.1 12.5 2.0 3.0 2 1 0 2 2 2 2 Apolipoprotein A1/A4/E domain Lectin_N PF03954.14 ORF41778 - 0.0079 15.9 4.1 0.015 15.0 1.2 2.5 2 0 0 2 2 2 1 Hepatic lectin, N-terminal domain Tox-REase-9 PF15650.6 ORF41778 - 0.01 16.1 3.5 0.085 13.2 0.3 3.4 3 0 0 3 3 3 0 Restriction endonuclease fold toxin 9 TMPIT PF07851.13 ORF41778 - 0.014 14.7 2.9 0.014 14.7 2.9 2.7 3 0 0 3 3 3 0 TMPIT-like protein DUF1664 PF07889.12 ORF41778 - 0.014 15.4 1.1 0.014 15.4 1.1 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Col_cuticle_N PF01484.17 ORF41778 - 0.05 13.7 3.2 13 6.0 0.0 3.8 2 1 1 3 3 3 0 Nematode cuticle collagen N-terminal domain Flg_hook PF02120.16 ORF41778 - 0.07 13.0 0.3 0.28 11.1 0.3 2.1 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK Ribosomal_S18 PF01084.20 ORF41778 - 0.1 12.9 0.2 1.5 9.1 0.1 2.7 2 0 0 2 2 2 0 Ribosomal protein S18 Baculo_PEP_C PF04513.12 ORF41778 - 0.16 12.0 11.8 0.86 9.6 1.2 3.2 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Val_tRNA-synt_C PF10458.9 ORF41778 - 0.18 12.1 2.6 8.6 6.7 0.0 3.6 3 0 0 3 3 2 0 Valyl tRNA synthetase tRNA binding arm G-gamma PF00631.22 ORF41778 - 0.26 11.3 0.1 0.26 11.3 0.1 3.0 4 0 0 4 4 4 0 GGL domain DUF883 PF05957.13 ORF41778 - 0.52 10.9 4.2 3.6 8.2 0.1 3.7 3 2 1 4 4 4 0 Bacterial protein of unknown function (DUF883) DUF4407 PF14362.6 ORF41778 - 1.2 8.5 4.9 1 8.7 2.3 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SpoIISA_toxin PF14171.6 ORF41778 - 1.4 8.5 12.4 1 9.0 4.9 2.5 2 0 0 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system Lzipper-MIP1 PF14389.6 ORF41778 - 2.3 8.6 6.8 11 6.4 1.4 3.9 2 2 1 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 YtxH PF12732.7 ORF41778 - 3 8.4 11.6 35 5.0 1.2 4.3 3 1 0 3 3 3 0 YtxH-like protein Cupin_8 PF13621.6 ORF32476 - 5.6e-35 121.3 0.0 7.3e-35 120.9 0.0 1.1 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF32476 - 9e-09 35.2 0.1 3e-08 33.5 0.1 1.8 1 1 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF32476 - 0.001 19.5 0.0 0.0017 18.8 0.0 1.5 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_2 PF07883.11 ORF32476 - 0.041 13.6 0.0 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 Cupin domain WD40 PF00400.32 ORF24473 - 1e-14 54.6 21.3 0.00022 22.0 0.1 7.1 8 0 0 8 8 8 3 WD domain, G-beta repeat Nup160 PF11715.8 ORF24473 - 7.5e-07 28.2 8.2 0.042 12.5 1.1 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 ZapB PF06005.12 ORF24473 - 0.2 12.1 0.2 0.32 11.5 0.2 1.2 1 0 0 1 1 1 0 Cell division protein ZapB DUF4618 PF15397.6 ORF24473 - 0.23 10.8 0.0 0.35 10.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Ge1_WD40 PF16529.5 ORF24473 - 0.26 10.2 5.3 1.3 7.9 1.3 2.9 2 1 1 3 3 3 0 WD40 region of Ge1, enhancer of mRNA-decapping protein zf-Di19 PF05605.12 ORF24473 - 0.35 11.2 2.7 2.6 8.4 0.2 3.1 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding PALB2_WD40 PF16756.5 ORF24473 - 0.96 8.3 9.4 2 7.2 0.3 4.4 2 2 3 5 5 5 0 Partner and localizer of BRCA2 WD40 domain zf-ACC PF17848.1 ORF24473 - 1.1 9.3 4.3 0.27 11.3 0.3 2.1 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain UQ_con PF00179.26 ORF12474 - 9.8e-09 35.0 0.0 2.3e-08 33.8 0.0 1.7 1 1 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF5475 PF17569.2 ORF111046 - 0.1 12.9 1.2 0.51 10.7 0.3 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5475) Glyoxalase_2 PF12681.7 NODE_13555_length_1205_cov_87.341880_g10154_i0reverse_frame_3 - 0.12 12.3 1.4 0.61 10.0 1.4 2.1 1 1 0 1 1 1 0 Glyoxalase-like domain Orn_Arg_deC_N PF02784.16 ORF93766 - 2.9e-73 246.3 0.0 3.6e-73 246.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DUF4091 PF13320.6 ORF93766 - 0.085 13.0 0.0 0.57 10.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4091) GntP_permease PF02447.16 ORF9101 - 9.3e-173 574.9 34.7 1.1e-172 574.8 34.7 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 ORF9101 - 2.2e-26 92.8 33.4 3e-26 92.3 33.4 1.1 1 0 0 1 1 1 1 Citrate transporter Na_H_antiporter PF03553.14 ORF9101 - 0.0002 20.7 21.2 0.0002 20.7 21.2 2.7 1 1 1 2 2 2 1 Na+/H+ antiporter family DUF3007 PF11460.8 ORF9101 - 0.03 14.6 1.3 0.1 12.8 1.3 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) SpecificRecomb PF10136.9 ORF9101 - 0.34 9.2 3.8 0.66 8.2 3.8 1.4 1 0 0 1 1 1 0 Site-specific recombinase GNT-I PF03071.15 ORF8550 - 1.3e-38 132.9 0.0 2e-38 132.3 0.0 1.2 1 0 0 1 1 1 1 GNT-I family Glyco_transf_18 PF15024.6 ORF8550 - 0.00017 20.4 7.7 0.00023 19.9 7.7 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 18 MGAT2 PF05060.14 ORF8550 - 0.38 9.8 2.5 0.25 10.3 0.1 1.7 2 0 0 2 2 2 0 N-acetylglucosaminyltransferase II (MGAT2) Asp PF00026.23 ORF82064 - 2.4e-05 23.9 0.2 0.0033 16.9 0.0 3.4 1 1 0 2 2 2 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 ORF82064 - 0.0014 19.2 0.3 0.64 10.7 0.0 3.1 2 1 0 2 2 2 2 Aspartyl protease CCSMST1 PF15013.6 ORF77119 - 0.037 14.2 13.3 0.26 11.5 0.1 4.8 2 1 2 4 4 4 0 CCSMST1 family PulG PF11773.8 ORF77119 - 0.097 12.5 0.2 0.097 12.5 0.2 2.6 4 0 0 4 4 4 0 Type II secretory pathway pseudopilin DnaJ PF00226.31 ORF72344 - 2.9e-23 81.8 1.2 1e-22 80.0 1.2 1.9 2 0 0 2 2 2 1 DnaJ domain DnaJ-X PF14308.6 ORF72344 - 8.1e-23 81.0 0.0 1.9e-22 79.8 0.0 1.6 1 1 0 1 1 1 1 X-domain of DnaJ-containing Pyrophosphatase PF00719.19 ORF71861 - 7.1e-45 152.7 0.1 1.5e-44 151.6 0.1 1.6 1 0 0 1 1 1 1 Inorganic pyrophosphatase Orn_Arg_deC_N PF02784.16 ORF709 - 2.9e-73 246.3 0.0 3.6e-73 246.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DUF4091 PF13320.6 ORF709 - 0.085 13.0 0.0 0.57 10.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4091) Glt_symporter PF03616.14 ORF68848 - 2.3e-164 546.4 24.6 2.3e-164 546.4 24.6 1.3 2 0 0 2 2 2 1 Sodium/glutamate symporter TPR_19 PF14559.6 ORF62667 - 0.0021 18.5 2.4 0.65 10.6 5.1 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF5966 - 4.1e-13 48.5 4.0 9.3e-07 28.4 0.0 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF5966 - 4.7e-12 45.1 8.5 5.6e-05 22.9 0.0 4.6 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF5966 - 2.3e-11 44.1 6.9 1e-06 29.3 0.5 4.9 3 1 2 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF5966 - 1.6e-08 34.7 12.2 3.8e-08 33.5 0.9 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF5966 - 8.2e-08 31.9 2.0 0.0043 17.2 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF5966 - 2.5e-05 23.9 1.7 0.68 9.7 0.0 3.5 3 0 0 3 3 3 2 TPR repeat TPR_7 PF13176.6 ORF5966 - 0.0002 21.2 9.0 0.11 12.6 0.0 4.5 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF5966 - 0.00028 21.3 12.4 0.00074 20.0 0.2 3.9 3 2 1 5 5 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF5966 - 0.00049 19.9 5.7 0.089 12.7 0.3 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF5966 - 0.0036 17.4 3.7 0.19 11.9 0.3 3.8 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF5966 - 0.0046 17.5 7.1 2.8 8.8 0.1 5.1 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF5966 - 0.0084 16.4 3.7 0.42 11.1 0.1 3.9 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF5966 - 0.019 15.5 4.3 11 7.0 0.0 5.1 4 0 0 4 4 4 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF5966 - 0.023 14.8 0.0 0.11 12.6 0.0 2.2 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat Rapsyn_N PF10579.9 ORF5966 - 0.027 14.6 0.1 1 9.5 0.0 2.9 1 1 1 2 2 2 0 Rapsyn N-terminal myristoylation and linker region ANAPC3 PF12895.7 ORF5966 - 0.031 14.5 2.1 0.031 14.5 2.1 2.9 2 1 1 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF5966 - 0.12 13.3 16.6 1.1 10.3 0.0 5.5 4 1 2 6 6 4 0 Tetratricopeptide repeat Cytochrom_B562 PF07361.11 ORF5966 - 0.13 12.9 3.4 0.18 12.5 0.0 2.9 4 1 1 5 5 5 0 Cytochrome b562 DUF4363 PF14276.6 ORF5966 - 1 9.5 3.9 2.9 8.1 0.1 3.0 3 1 1 4 4 4 0 Domain of unknown function (DUF4363) NOT2_3_5 PF04153.18 ORF49900 - 1.4e-18 67.3 1.2 1.4e-18 67.3 1.2 2.7 2 1 0 2 2 2 1 NOT2 / NOT3 / NOT5 family RELT PF12606.8 ORF49464 - 6.4 5.8 6.8 14 4.7 6.8 1.5 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Orn_Arg_deC_N PF02784.16 ORF44722 - 2.9e-73 246.3 0.0 3.6e-73 246.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DUF4091 PF13320.6 ORF44722 - 0.085 13.0 0.0 0.57 10.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4091) DEAD PF00270.29 ORF43132 - 4e-41 140.7 0.1 6.7e-41 140.0 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF43132 - 1.2e-31 109.3 0.1 2.9e-30 104.9 0.0 2.7 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF43132 - 1.2e-05 25.4 0.0 2.2e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 ORF43132 - 0.0087 16.4 0.0 2 8.7 0.0 2.5 2 1 0 2 2 2 2 AAA domain CMS1 PF14617.6 ORF43132 - 0.0097 15.3 0.1 0.081 12.2 0.0 2.1 2 0 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit TMEM43 PF07787.12 ORF40453 - 7.3e-26 91.1 0.0 1.3e-25 90.3 0.0 1.4 1 1 0 1 1 1 1 Transmembrane protein 43 CrgA PF06781.12 ORF40453 - 1 9.5 2.7 2.3 8.3 0.8 2.3 2 0 0 2 2 2 0 Cell division protein CrgA DUF4064 PF13273.6 ORF40453 - 3.7 7.9 6.1 1.5 9.1 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) DPM2 PF07297.12 ORF3350 - 0.028 14.7 0.3 0.14 12.5 0.3 2.3 1 0 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) MTABC_N PF16185.5 ORF3350 - 0.046 13.2 1.5 0.14 11.7 1.0 2.0 2 0 0 2 2 2 0 Mitochondrial ABC-transporter N-terminal five TM region Stap_Strp_toxin PF01123.20 ORF3011 - 0.76 10.7 9.4 0.37 11.7 1.6 3.1 2 1 1 3 3 3 0 Staphylococcal/Streptococcal toxin, OB-fold domain La PF05383.17 ORF26602 - 2.8e-15 56.1 0.0 6.6e-15 54.9 0.0 1.7 2 0 0 2 2 2 1 La domain AAA_33 PF13671.6 ORF26602 - 4.4e-15 56.1 5.3 6e-08 32.9 0.1 2.9 2 1 1 3 3 3 2 AAA domain KTI12 PF08433.10 ORF26602 - 0.00078 19.0 0.1 0.5 9.8 0.0 2.2 1 1 1 2 2 2 2 Chromatin associated protein KTI12 AAA_18 PF13238.6 ORF26602 - 0.0015 19.1 0.3 1.2 9.7 0.1 2.6 1 1 1 2 2 2 2 AAA domain AAA_28 PF13521.6 ORF26602 - 0.019 15.2 1.8 0.14 12.4 0.0 2.5 1 1 0 2 2 2 0 AAA domain AAA_22 PF13401.6 ORF26602 - 0.023 14.9 0.0 0.072 13.4 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF26602 - 0.027 14.9 0.1 6.2 7.3 0.0 2.5 1 1 1 2 2 2 0 AAA domain Ploopntkinase3 PF18751.1 ORF26602 - 0.034 14.0 0.0 0.071 13.0 0.0 1.5 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_5 PF07728.14 ORF26602 - 0.13 12.3 0.1 0.36 10.8 0.1 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF26602 - 0.67 10.3 3.7 1 9.7 1.3 2.6 2 1 0 2 2 2 0 AAA ATPase domain Ribosomal_L20 PF00453.18 ORF26602 - 0.67 10.1 3.0 18 5.5 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein L20 DUF664 PF04978.12 ORF26602 - 1.3 9.5 7.8 0.49 10.8 1.4 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF664) Aminotran_5 PF00266.19 ORF26483 - 7e-142 472.8 0.0 7.9e-142 472.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF26483 - 0.0027 16.3 0.0 0.0036 15.9 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme SelA PF03841.13 ORF26483 - 0.15 11.0 0.0 0.26 10.3 0.0 1.3 1 0 0 1 1 1 0 L-seryl-tRNA selenium transferase PTR2 PF00854.21 ORF24037 - 8e-89 298.2 16.8 9.7e-89 297.9 16.8 1.1 1 0 0 1 1 1 1 POT family MFS_1 PF07690.16 ORF24037 - 2.5e-09 36.5 36.9 2.5e-09 36.5 36.9 3.2 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF4271 PF14093.6 ORF24037 - 0.067 13.1 0.1 0.067 13.1 0.1 4.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4271) WD40 PF00400.32 ORF23188 - 1.3e-28 98.7 15.8 2.4e-06 28.1 0.0 7.4 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF23188 - 6e-11 42.5 0.3 0.016 15.5 0.0 5.3 2 1 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF23188 - 9.3e-06 24.8 0.0 0.66 8.9 0.0 3.5 2 1 1 3 3 3 3 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF23188 - 0.00036 19.3 0.9 0.11 11.1 0.1 3.7 3 1 2 5 5 5 1 Nucleoporin Nup120/160 eIF2A PF08662.11 ORF23188 - 0.0021 18.0 0.0 0.74 9.7 0.0 3.3 2 1 1 3 3 3 2 Eukaryotic translation initiation factor eIF2A Nbas_N PF15492.6 ORF23188 - 0.021 14.2 0.1 5.8 6.2 0.0 3.0 2 1 0 3 3 3 0 Neuroblastoma-amplified sequence, N terminal Cpn60_TCP1 PF00118.24 ORF19135 - 6.6e-115 384.5 7.7 7.5e-115 384.4 7.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Sortilin_C PF15901.5 ORF1155 - 3.2e-40 138.3 6.2 4.1e-40 137.9 6.2 1.1 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal Sortilin-Vps10 PF15902.5 ORF1155 - 1.6e-25 89.8 0.3 2.2e-25 89.4 0.3 1.2 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, Peptidase_C1 PF00112.23 ORF109418 - 4e-26 92.5 0.4 7.2e-14 52.4 0.0 2.4 2 1 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF109418 - 7.4e-09 34.9 0.5 0.0026 16.6 0.0 2.3 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF109418 - 1.8e-06 28.6 0.0 0.028 15.0 0.0 2.5 2 0 0 2 2 2 2 Peptidase_C39 like family ALS_ss_C PF10369.9 ORF109418 - 0.0089 16.2 0.0 7.4 6.9 0.0 2.4 2 0 0 2 2 2 2 Small subunit of acetolactate synthase DUF3688 PF12461.8 ORF109418 - 0.011 14.3 0.0 0.77 8.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3688) BtrH_N PF14399.6 ORF109418 - 0.023 15.0 0.0 11 6.3 0.0 2.8 2 0 0 2 2 2 0 Butirosin biosynthesis protein H, N-terminal Smr PF01713.21 ORF107927 - 5.6e-07 29.8 0.3 1.9e-06 28.1 0.0 2.1 2 0 0 2 2 2 1 Smr domain Corona_NS4 PF03905.13 NODE_13683_length_1199_cov_418.188144_g10252_i0reverse_frame_1 - 0.11 12.5 0.3 0.2 11.7 0.3 1.4 1 0 0 1 1 1 0 Coronavirus non-structural protein NS4 Antimicrobial12 PF08107.11 NODE_13615_length_1202_cov_369.766067_g4519_i3reverse_frame_2 - 0.17 11.6 3.3 0.26 11.0 3.3 1.3 1 0 0 1 1 1 0 Pleurocidin family PTH2 PF01981.16 NODE_13615_length_1202_cov_369.766067_g4519_i3reverse_frame_2 - 0.25 11.7 3.4 0.21 11.9 0.2 2.4 1 1 1 2 2 2 0 Peptidyl-tRNA hydrolase PTH2 DUF2130 PF09903.9 NODE_13615_length_1202_cov_369.766067_g4519_i3reverse_frame_2 - 1.1 8.5 34.1 1.3 8.2 15.4 3.3 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2130) V-ATPase_G_2 PF16999.5 NODE_13615_length_1202_cov_369.766067_g4519_i3reverse_frame_2 - 4 7.9 14.7 7.3 7.1 7.9 3.1 1 1 2 3 3 3 0 Vacuolar (H+)-ATPase G subunit MbeB_N PF04837.12 NODE_13615_length_1202_cov_369.766067_g4519_i3reverse_frame_2 - 6.3 7.2 14.0 0.77 10.1 0.3 4.2 3 1 1 4 4 4 0 MbeB-like, N-term conserved region IMPDH PF00478.25 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_3 - 1.1e-05 24.6 0.0 1.4e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CARM1 PF11531.8 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_3 - 0.1 12.8 1.6 0.29 11.3 1.6 1.7 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal GATase PF00117.28 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_2 - 3.2e-42 144.5 0.0 4.6e-42 143.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_2 - 3.9e-09 36.6 0.0 8.6e-09 35.5 0.0 1.6 1 0 0 1 1 1 1 Peptidase C26 NAD_synthase PF02540.17 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_2 - 5.4e-07 29.0 0.0 8.2e-07 28.4 0.0 1.3 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_2 - 5.6e-05 22.1 0.0 7.7e-05 21.6 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.21 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_2 - 0.0021 17.8 0.0 0.016 14.9 0.0 2.0 2 0 0 2 2 2 1 Asparagine synthase ThiI PF02568.14 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_2 - 0.015 14.9 0.0 0.026 14.1 0.0 1.3 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) SNO PF01174.19 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_2 - 0.022 14.6 0.0 0.21 11.4 0.0 2.2 1 1 0 1 1 1 0 SNO glutamine amidotransferase family PAPS_reduct PF01507.19 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_2 - 0.027 14.5 0.0 0.042 13.9 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family ATP_bind_3 PF01171.20 NODE_13604_length_1203_cov_4.015411_g10192_i0reverse_frame_2 - 0.1 12.3 0.0 0.25 11.1 0.0 1.7 2 0 0 2 2 2 0 PP-loop family Asp PF00026.23 NODE_13592_length_1203_cov_1108.665240_g10183_i0forward_frame_3 - 1.6e-38 132.9 0.4 2.1e-38 132.6 0.4 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_13592_length_1203_cov_1108.665240_g10183_i0forward_frame_3 - 7.6e-06 26.3 1.3 3e-05 24.4 0.3 2.4 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 NODE_13592_length_1203_cov_1108.665240_g10183_i0forward_frame_3 - 0.063 12.9 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal ANAPC4_WD40 PF12894.7 ORF94389 - 5.5e-05 23.4 0.4 0.14 12.5 0.0 3.8 3 1 2 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF94389 - 0.0031 18.3 0.0 3.1 8.8 0.0 2.8 1 1 1 2 2 2 2 WD domain, G-beta repeat CPSase_L_D2 PF02786.17 ORF89248 - 3.6e-05 23.4 0.0 0.073 12.6 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.6 ORF89248 - 0.00087 18.9 0.1 0.014 15.0 0.0 2.6 2 1 0 2 2 2 1 ATP-grasp domain DUF2791 PF10923.8 ORF89248 - 0.037 12.9 0.0 0.067 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) DUF3450 PF11932.8 ORF88170 - 0.0084 15.4 13.4 0.066 12.5 2.9 2.8 2 1 1 3 3 3 2 Protein of unknown function (DUF3450) DNase-RNase PF02577.14 ORF88170 - 0.036 13.7 0.0 0.067 12.8 0.0 1.4 1 0 0 1 1 1 0 Bifunctional nuclease TMF_DNA_bd PF12329.8 ORF88170 - 0.046 13.7 0.6 0.046 13.7 0.6 3.9 3 2 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Prefoldin_2 PF01920.20 ORF88170 - 0.056 13.4 22.7 1.2 9.1 1.1 3.5 3 0 0 3 3 3 0 Prefoldin subunit OmpH PF03938.14 ORF88170 - 0.081 13.3 16.3 0.4 11.0 9.3 2.4 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF88170 - 0.14 11.4 6.3 0.26 10.6 2.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) FliJ PF02050.16 ORF88170 - 0.15 12.3 12.3 3.9 7.7 8.3 2.7 2 2 0 2 2 2 0 Flagellar FliJ protein T3SSipB PF16535.5 ORF88170 - 0.25 11.8 4.1 0.16 12.5 0.8 2.1 2 0 0 2 2 2 0 Type III cell invasion protein SipB TMPIT PF07851.13 ORF88170 - 0.67 9.1 13.3 0.12 11.6 7.8 2.1 2 0 0 2 2 2 0 TMPIT-like protein DUF2203 PF09969.9 ORF88170 - 1.4 9.7 8.8 2.6 8.8 4.4 2.7 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF88170 - 1.4 7.9 14.4 0.13 11.3 9.5 1.8 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_MT_bd PF06657.13 ORF88170 - 2.5 8.6 13.7 0.24 11.9 2.3 3.6 3 1 1 4 4 4 0 Centrosome microtubule-binding domain of Cep57 Syntaxin-6_N PF09177.11 ORF88170 - 6.2 7.4 13.9 1.5 9.4 7.1 3.0 2 1 0 2 2 2 0 Syntaxin 6, N-terminal UPF0242 PF06785.11 ORF88170 - 6.3 6.8 16.2 15 5.6 9.6 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus EF-hand_8 PF13833.6 ORF86824 - 1.1e-06 28.4 4.2 0.0025 17.6 0.2 3.4 3 1 0 3 3 3 2 EF-hand domain pair IQ PF00612.27 ORF86824 - 0.00051 19.6 0.1 0.001 18.7 0.1 1.5 1 0 0 1 1 1 1 IQ calmodulin-binding motif EF-hand_7 PF13499.6 ORF86824 - 0.00069 20.0 5.0 0.018 15.5 0.1 3.3 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF86824 - 0.014 14.9 0.0 0.014 14.9 0.0 4.1 5 0 0 5 5 5 0 EF hand EF-hand_6 PF13405.6 ORF86824 - 0.026 14.4 10.5 0.54 10.3 0.0 5.3 6 0 0 6 6 6 0 EF-hand domain EF-hand_5 PF13202.6 ORF86824 - 0.068 12.7 0.1 0.38 10.3 0.0 2.3 2 0 0 2 2 2 0 EF hand Cyt-b5 PF00173.28 ORF82436 - 4.5e-16 58.8 0.0 8.6e-16 57.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ni_hydr_CYTB PF01292.20 ORF82436 - 1.8e-12 47.2 0.2 2.8e-12 46.6 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 ORF82436 - 0.015 15.5 0.2 0.044 13.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) DUF2231 PF09990.9 ORF82436 - 0.028 14.9 0.2 0.063 13.7 0.2 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Ferric_reduct PF01794.19 ORF82436 - 3.2 7.9 6.4 2.5 8.3 0.3 2.6 2 1 1 3 3 3 0 Ferric reductase like transmembrane component Neur_chan_memb PF02932.16 ORF80102 - 4.8 7.2 7.0 1.7 8.6 3.6 1.8 2 0 0 2 2 2 0 Neurotransmitter-gated ion-channel transmembrane region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks27.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks27.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks27.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks27.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:02:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Nudix_N_2 PF14803.6 NODE_62512_length_260_cov_2.822222_g54571_i0forward_frame_2 - 0.028 14.3 0.2 0.11 12.5 0.1 2.0 2 0 0 2 2 2 0 Nudix N-terminal Ferritin PF00210.24 NODE_62511_length_260_cov_2.857778_g54570_i0reverse_frame_2 - 1.3e-14 54.3 0.0 1.5e-14 54.1 0.0 1.0 1 0 0 1 1 1 1 Ferritin-like domain MATalpha_HMGbox PF04769.12 NODE_62511_length_260_cov_2.857778_g54570_i0reverse_frame_2 - 0.035 13.4 0.0 0.037 13.3 0.0 1.1 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box SHIPPO-rpt PF07004.12 NODE_62507_length_260_cov_2.915556_g54566_i0reverse_frame_2 - 0.0045 17.8 1.9 0.0083 17.0 1.9 1.5 1 0 0 1 1 1 1 Sperm-tail PG-rich repeat Circo_capsid PF02443.15 NODE_62503_length_260_cov_3.111111_g54562_i0reverse_frame_3 - 9.8 5.7 15.9 9.7 5.7 15.9 1.1 1 0 0 1 1 1 0 Circovirus capsid protein DUF2222 PF09984.9 NODE_62502_length_260_cov_3.151111_g54561_i0reverse_frame_2 - 0.0043 16.9 0.9 0.0051 16.7 0.9 1.0 1 0 0 1 1 1 1 Uncharacterised signal transduction histidine kinase domain (DUF2222) DUF4857 PF16149.5 NODE_62502_length_260_cov_3.151111_g54561_i0reverse_frame_2 - 0.018 14.3 0.1 0.024 13.9 0.0 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4857) CybS PF05328.12 NODE_62502_length_260_cov_3.151111_g54561_i0forward_frame_2 - 0.029 14.0 0.3 0.035 13.8 0.3 1.2 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit Disaggr_assoc PF08480.10 NODE_62501_length_260_cov_3.253333_g54560_i0reverse_frame_2 - 0.032 14.1 0.0 0.032 14.1 0.0 1.2 1 0 0 1 1 1 0 Disaggregatase related Bacteroid_pep PF14406.6 NODE_62501_length_260_cov_3.253333_g54560_i0reverse_frame_2 - 0.087 13.2 0.2 0.15 12.4 0.1 1.6 1 1 0 1 1 1 0 Ribosomally synthesized peptide in Bacteroidetes AzlC PF03591.14 NODE_62499_length_260_cov_3.502222_g54558_i0forward_frame_3 - 1.7e-14 54.5 1.2 1.8e-14 54.4 1.2 1.0 1 0 0 1 1 1 1 AzlC protein Glyco_tran_WecB PF03808.13 NODE_62499_length_260_cov_3.502222_g54558_i0forward_frame_3 - 0.058 13.3 0.1 0.069 13.1 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family DNAJ_related PF12339.8 NODE_62498_length_260_cov_3.506667_g54557_i0reverse_frame_2 - 0.019 15.2 0.3 0.026 14.8 0.3 1.1 1 0 0 1 1 1 0 DNA-J related protein Glucos_trans_II PF14264.6 NODE_62497_length_260_cov_3.582222_g54556_i0reverse_frame_2 - 0.007 15.8 5.2 0.0082 15.5 5.2 1.0 1 0 0 1 1 1 1 Glucosyl transferase GtrII DUF2650 PF10853.8 NODE_62497_length_260_cov_3.582222_g54556_i0reverse_frame_2 - 2.2 8.0 9.0 0.23 11.2 2.8 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2650) cIII PF08134.11 NODE_62493_length_260_cov_4.320000_g54552_i0reverse_frame_3 - 0.02 14.6 1.3 0.037 13.8 1.3 1.4 1 0 0 1 1 1 0 cIII protein family HALZ PF02183.18 NODE_62490_length_260_cov_19.031111_g54549_i0forward_frame_3 - 0.043 14.1 0.5 0.063 13.5 0.5 1.3 1 0 0 1 1 1 0 Homeobox associated leucine zipper DUF1461 PF07314.11 NODE_62489_length_260_cov_33.208889_g54548_i0forward_frame_2 - 0.36 10.7 10.8 0.57 10.1 10.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1461) MORN PF02493.20 NODE_62488_length_260_cov_35.168889_g54547_i0reverse_frame_2 - 4.6e-10 38.8 14.0 0.00012 21.7 2.7 3.3 3 0 0 3 3 3 3 MORN repeat Antirestrict PF03230.13 NODE_62488_length_260_cov_35.168889_g54547_i0reverse_frame_2 - 0.16 12.0 0.2 1.2 9.2 0.2 1.9 1 1 1 2 2 2 0 Antirestriction protein ImmE5 PF11480.8 NODE_62488_length_260_cov_35.168889_g54547_i0reverse_frame_2 - 0.45 11.0 5.5 6 7.4 0.5 2.1 1 1 1 2 2 2 0 Colicin-E5 Imm protein PsiB PF06290.11 NODE_62487_length_260_cov_36.737778_g54546_i0reverse_frame_2 - 0.18 11.3 0.0 0.26 10.7 0.0 1.3 1 1 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) CMS1 PF14617.6 NODE_62484_length_260_cov_40.791111_g54543_i0reverse_frame_3 - 0.13 11.6 0.0 0.14 11.5 0.0 1.0 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit Tetraspanin PF00335.20 NODE_62482_length_260_cov_45.280000_g54541_i0reverse_frame_3 - 0.19 11.4 2.6 0.2 11.4 2.6 1.0 1 0 0 1 1 1 0 Tetraspanin family Conotoxin PF02950.17 NODE_62482_length_260_cov_45.280000_g54541_i0forward_frame_2 - 0.063 14.3 0.1 0.097 13.7 0.1 1.3 1 0 0 1 1 1 0 Conotoxin DUF4379 PF14311.6 NODE_62478_length_260_cov_47.706667_g54537_i0reverse_frame_2 - 0.0034 17.7 1.6 0.0046 17.3 1.6 1.4 1 0 0 1 1 1 1 Probable Zinc-ribbon domain YfhO PF09586.10 NODE_62478_length_260_cov_47.706667_g54537_i0forward_frame_3 - 1.8 6.7 8.7 1.9 6.6 8.7 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Methyltrn_RNA_2 PF04013.12 NODE_62477_length_260_cov_48.013333_g54536_i0reverse_frame_2 - 0.0046 16.7 0.0 0.0061 16.3 0.0 1.1 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase Levi_coat PF01819.17 NODE_62477_length_260_cov_48.013333_g54536_i0forward_frame_3 - 0.18 11.8 1.6 0.22 11.5 1.6 1.1 1 0 0 1 1 1 0 Levivirus coat protein DUF1361 PF07099.11 NODE_62476_length_260_cov_53.937778_g54535_i0reverse_frame_3 - 0.13 12.2 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1361) Comm PF15957.5 NODE_62476_length_260_cov_53.937778_g54535_i0reverse_frame_3 - 0.15 12.4 0.1 0.16 12.3 0.1 1.1 1 0 0 1 1 1 0 Commissureless Cation_ATPase_C PF00689.21 NODE_62476_length_260_cov_53.937778_g54535_i0forward_frame_3 - 1.2 8.8 7.8 1.3 8.7 7.8 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus CCT PF06203.14 NODE_62471_length_260_cov_57.853333_g54530_i0reverse_frame_2 - 0.0012 18.8 2.8 0.0012 18.8 2.8 2.6 2 1 0 2 2 2 1 CCT motif Mucin PF01456.17 NODE_62469_length_260_cov_60.977778_g54528_i0reverse_frame_3 - 4.7 7.2 6.5 10 6.1 6.5 1.6 1 1 0 1 1 1 0 Mucin-like glycoprotein Kelch_1 PF01344.25 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 1.1e-13 50.5 0.0 1.1e-13 50.5 0.0 1.5 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 2.7e-10 40.2 0.0 3.4e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 3e-09 36.7 0.0 3.8e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 2.3e-07 30.9 0.8 3.6e-07 30.3 0.2 1.6 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 4.1e-06 26.5 0.1 1.5e-05 24.7 0.1 1.8 1 1 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 0.05 13.6 0.3 0.11 12.5 0.0 1.8 2 0 0 2 2 2 0 Kelch motif TBPIP_N PF15517.6 NODE_62464_length_260_cov_65.702222_g54523_i0reverse_frame_2 - 0.063 13.3 0.0 0.072 13.1 0.0 1.1 1 0 0 1 1 1 0 TBP-interacting protein N-terminus DUF4462 PF14692.6 NODE_62463_length_260_cov_66.453333_g54522_i0reverse_frame_2 - 0.15 11.5 0.9 0.24 10.9 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) zf-TRAF_2 PF15965.5 NODE_62462_length_260_cov_69.208889_g54521_i0reverse_frame_2 - 0.0053 17.2 1.7 0.0072 16.8 1.3 1.5 1 1 0 1 1 1 1 TRAF-like zinc-finger Med2 PF11214.8 NODE_62456_length_260_cov_76.693333_g54515_i0forward_frame_3 - 0.042 14.0 0.1 0.05 13.7 0.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 2 Adeno_E3_CR2 PF02439.15 NODE_62454_length_260_cov_82.746667_g54513_i0reverse_frame_3 - 0.1 12.4 1.3 0.21 11.4 1.3 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 DUF1952 PF09189.10 NODE_62452_length_260_cov_88.115556_g54511_i0reverse_frame_3 - 0.13 12.2 0.1 0.16 11.9 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1952) BaffR-Tall_bind PF09256.10 NODE_62450_length_260_cov_91.053333_g54509_i0reverse_frame_2 - 0.56 10.0 4.0 13 5.7 0.0 3.0 2 1 1 3 3 3 0 BAFF-R, TALL-1 binding Ribosomal_S30 PF04758.14 NODE_62445_length_260_cov_105.626667_g54504_i0reverse_frame_2 - 6.2e-21 74.3 9.7 6.2e-21 74.3 9.7 2.1 2 0 0 2 2 2 1 Ribosomal protein S30 RNase_E_G PF10150.9 NODE_62445_length_260_cov_105.626667_g54504_i0forward_frame_2 - 0.098 12.1 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease E/G family PRMT5_C PF17286.2 NODE_62442_length_260_cov_112.026667_g54501_i0reverse_frame_3 - 0.035 14.0 0.3 0.04 13.8 0.3 1.2 1 0 0 1 1 1 0 PRMT5 oligomerisation domain DUF1106 PF06523.11 NODE_62442_length_260_cov_112.026667_g54501_i0forward_frame_3 - 0.057 13.5 1.2 0.11 12.6 1.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1106) TPR_9 PF13371.6 NODE_62440_length_260_cov_122.835556_g54499_i0reverse_frame_2 - 0.08 13.1 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Chaperone_III PF07824.12 NODE_62440_length_260_cov_122.835556_g54499_i0forward_frame_3 - 0.025 14.8 0.0 0.029 14.6 0.0 1.1 1 0 0 1 1 1 0 Type III secretion chaperone domain TRL PF13146.6 NODE_62439_length_260_cov_130.151111_g54498_i0forward_frame_2 - 0.094 13.0 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 TRL-like protein family Mpv17_PMP22 PF04117.12 NODE_62438_length_260_cov_132.573333_g54497_i0reverse_frame_2 - 1e-08 35.3 0.0 1.5e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 Mpv17 / PMP22 family NCE101 PF11654.8 NODE_62436_length_260_cov_138.906667_g54495_i0forward_frame_3 - 0.093 12.5 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Non-classical export protein 1 Integrase_1 PF12835.7 NODE_62435_length_260_cov_139.853333_g54494_i0reverse_frame_3 - 0.005 16.9 0.1 0.005 16.9 0.1 1.2 1 0 0 1 1 1 1 Integrase Rota_Capsid_VP6 PF00980.17 NODE_62434_length_260_cov_190.937778_g54493_i0reverse_frame_3 - 0.15 11.0 0.1 0.15 10.9 0.1 1.0 1 0 0 1 1 1 0 Rotavirus major capsid protein VP6 Dimer_Tnp_hAT PF05699.14 NODE_62427_length_260_cov_428.786667_g54487_i0reverse_frame_3 - 0.093 12.5 0.1 0.1 12.4 0.1 1.2 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region WH2 PF02205.20 NODE_62427_length_260_cov_428.786667_g54487_i0reverse_frame_2 - 0.052 13.4 0.1 0.081 12.8 0.1 1.3 1 0 0 1 1 1 0 WH2 motif TSGP1 PF07771.11 NODE_62422_length_260_cov_2816.097778_g54482_i0forward_frame_2 - 0.045 13.9 0.1 0.051 13.7 0.1 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 PPP1R35_C PF15503.6 NODE_62420_length_260_cov_5160.391111_g54480_i0reverse_frame_2 - 0.076 12.8 0.0 0.09 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 35 C-terminus DUF4834 PF16118.5 NODE_62415_length_261_cov_1.061947_g54475_i0reverse_frame_2 - 0.0019 19.1 0.0 0.0025 18.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) TssO PF17561.2 NODE_62415_length_261_cov_1.061947_g54475_i0reverse_frame_2 - 0.026 14.6 0.1 0.029 14.5 0.1 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO Connexin PF00029.19 NODE_62415_length_261_cov_1.061947_g54475_i0reverse_frame_2 - 0.03 14.1 0.0 0.033 13.9 0.0 1.0 1 0 0 1 1 1 0 Connexin C12orf66_like PF09404.10 NODE_62414_length_261_cov_1.061947_g54474_i0forward_frame_3 - 0.039 12.8 6.5 0.042 12.7 6.5 1.0 1 0 0 1 1 1 0 KICSTOR complex C12orf66 like Autophagy_C PF10381.9 NODE_62414_length_261_cov_1.061947_g54474_i0forward_frame_3 - 4.2 7.0 8.3 14 5.3 0.1 4.3 4 0 0 4 4 4 0 Autophagocytosis associated protein C-terminal DUF2512 PF10710.9 NODE_62414_length_261_cov_1.061947_g54474_i0forward_frame_3 - 7.6 6.2 7.8 6.1 6.5 1.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2512) HSR PF03172.13 NODE_62409_length_261_cov_1.230088_g54469_i0reverse_frame_3 - 0.06 13.5 0.2 0.067 13.3 0.2 1.1 1 0 0 1 1 1 0 HSR domain DUF2556 PF10831.8 NODE_62409_length_261_cov_1.230088_g54469_i0reverse_frame_3 - 0.076 13.0 0.2 0.11 12.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2556) TTL PF03133.15 NODE_62408_length_261_cov_1.238938_g54468_i0reverse_frame_2 - 6.6e-10 38.6 0.1 8.7e-10 38.2 0.1 1.2 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family zf-CHY PF05495.12 NODE_62407_length_261_cov_1.238938_g54467_i0forward_frame_3 - 6.6e-07 29.7 10.1 9.3e-07 29.3 10.1 1.2 1 0 0 1 1 1 1 CHY zinc finger PRNT PF15174.6 NODE_62406_length_261_cov_1.252212_g54466_i0reverse_frame_3 - 0.079 13.0 0.1 7.4 6.7 0.0 2.2 2 0 0 2 2 2 0 Prion-related protein testis-specific UPF0052 PF01933.18 NODE_62404_length_261_cov_1.296460_g54464_i0reverse_frame_3 - 0.014 14.6 0.0 0.015 14.6 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0052 zinc_ribbon_9 PF14369.6 NODE_62400_length_261_cov_1.367257_g54460_i0reverse_frame_3 - 0.11 12.8 0.0 0.17 12.2 0.0 1.4 1 0 0 1 1 1 0 zinc-ribbon DUF1499 PF07386.11 NODE_62400_length_261_cov_1.367257_g54460_i0forward_frame_2 - 1.5e-09 38.4 0.0 1.8e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) SID PF11778.8 NODE_62399_length_261_cov_1.384956_g54459_i0forward_frame_2 - 0.071 13.2 0.7 0.09 12.9 0.7 1.1 1 0 0 1 1 1 0 Septation initiation SP_C-Propep PF08999.10 NODE_62399_length_261_cov_1.384956_g54459_i0forward_frame_2 - 0.14 12.0 1.8 0.19 11.6 1.8 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF1392 PF07154.11 NODE_62397_length_261_cov_1.398230_g54457_i0reverse_frame_3 - 0.013 15.6 0.0 0.017 15.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1392) Ins_beta PF03488.14 NODE_62397_length_261_cov_1.398230_g54457_i0forward_frame_3 - 1 9.4 6.6 1.7 8.7 6.6 1.3 1 0 0 1 1 1 0 Nematode insulin-related peptide beta type DUF3335 PF11814.8 NODE_62394_length_261_cov_1.486726_g54454_i0reverse_frame_2 - 0.086 12.3 0.2 0.097 12.1 0.2 1.0 1 0 0 1 1 1 0 Peptidase_C39 like family BT1 PF03092.16 NODE_62381_length_261_cov_1.628319_g54441_i0forward_frame_3 - 0.0037 15.6 0.0 0.0045 15.3 0.0 1.2 1 0 0 1 1 1 1 BT1 family MFS_1 PF07690.16 NODE_62379_length_261_cov_1.690265_g54439_i0forward_frame_3 - 0.00016 20.7 1.8 0.00017 20.7 1.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1672 PF07901.11 NODE_62376_length_261_cov_1.712389_g54436_i0forward_frame_2 - 0.18 11.1 0.0 0.21 10.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1672) T2SSS_2 PF16549.5 NODE_62375_length_261_cov_1.725664_g54435_i0forward_frame_3 - 0.03 14.3 0.1 0.041 13.9 0.1 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS) pilotin, S protein FAST_1 PF06743.15 NODE_62372_length_261_cov_1.827434_g54432_i0forward_frame_3 - 0.019 14.9 1.4 0.028 14.4 1.4 1.3 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 1 DUF1609 PF07753.11 NODE_62369_length_261_cov_1.862832_g54429_i0reverse_frame_3 - 0.091 12.3 0.0 7.8 6.0 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1609) Alpha-amylase PF00128.24 NODE_62366_length_261_cov_1.929204_g54426_i0forward_frame_3 - 2.1e-05 24.3 2.0 0.00024 20.8 2.0 1.9 1 1 0 1 1 1 1 Alpha amylase, catalytic domain PALP PF00291.25 NODE_62363_length_261_cov_1.969027_g54423_i0reverse_frame_3 - 1.5e-07 31.1 0.0 1.9e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF2951 PF11166.8 NODE_62359_length_261_cov_2.044248_g54419_i0reverse_frame_3 - 0.11 12.7 1.4 0.12 12.6 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) YMF19 PF02326.15 NODE_62359_length_261_cov_2.044248_g54419_i0forward_frame_2 - 1.4 9.8 7.7 2 9.3 7.5 1.4 1 1 0 1 1 1 0 Plant ATP synthase F0 Cbl_N2 PF02761.14 NODE_62357_length_261_cov_2.123894_g54417_i0forward_frame_3 - 0.021 15.5 0.2 0.029 15.1 0.2 1.3 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, EF hand-like domain Colicin_V PF02674.16 NODE_62356_length_261_cov_2.123894_g54416_i0reverse_frame_3 - 0.0049 16.8 0.1 0.0055 16.7 0.1 1.1 1 0 0 1 1 1 1 Colicin V production protein 7TM_GPCR_Srh PF10318.9 NODE_62356_length_261_cov_2.123894_g54416_i0reverse_frame_3 - 0.0079 15.3 1.2 0.0089 15.1 1.2 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srh ERGIC_N PF13850.6 NODE_62356_length_261_cov_2.123894_g54416_i0reverse_frame_3 - 0.067 13.6 0.2 0.083 13.3 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4083 PF13314.6 NODE_62356_length_261_cov_2.123894_g54416_i0reverse_frame_3 - 0.08 12.9 2.8 0.11 12.5 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) ANTH PF07651.16 NODE_62353_length_261_cov_2.181416_g54413_i0reverse_frame_2 - 0.0011 18.1 0.2 0.0012 17.9 0.2 1.0 1 0 0 1 1 1 1 ANTH domain Glutaredoxin PF00462.24 NODE_62353_length_261_cov_2.181416_g54413_i0forward_frame_3 - 5.2e-07 29.8 0.0 7.5e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin Fer4_14 PF13394.6 NODE_62353_length_261_cov_2.181416_g54413_i0forward_frame_3 - 0.15 12.2 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S single cluster domain Suppressor_P21 PF11479.8 NODE_62348_length_261_cov_2.283186_g54408_i0forward_frame_3 - 0.037 14.2 0.3 0.049 13.8 0.3 1.4 1 1 0 1 1 1 0 RNA silencing suppressor P21 C-terminal domain RdRP PF05183.12 NODE_62344_length_261_cov_2.327434_g54404_i0forward_frame_3 - 2.5e-14 52.9 0.0 2.6e-14 52.8 0.0 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase Actin PF00022.19 NODE_62343_length_261_cov_2.331858_g54403_i0reverse_frame_2 - 2.4e-18 65.9 0.0 3.4e-18 65.5 0.0 1.3 1 1 0 1 1 1 1 Actin ERGIC_N PF13850.6 NODE_62332_length_261_cov_2.601770_g54392_i0forward_frame_3 - 0.0028 18.0 0.1 0.0033 17.7 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ku_C PF03730.14 NODE_62325_length_261_cov_2.663717_g54385_i0forward_frame_2 - 0.16 12.7 1.9 0.58 10.9 0.1 2.0 1 1 1 2 2 2 0 Ku70/Ku80 C-terminal arm LAGLIDADG_1 PF00961.19 NODE_62323_length_261_cov_2.690265_g54383_i0reverse_frame_3 - 0.055 14.4 1.1 0.059 14.3 1.1 1.1 1 0 0 1 1 1 0 LAGLIDADG endonuclease Kinesin PF00225.23 NODE_62323_length_261_cov_2.690265_g54383_i0reverse_frame_2 - 2e-22 79.6 0.0 2.1e-22 79.5 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_62323_length_261_cov_2.690265_g54383_i0reverse_frame_2 - 8.2e-12 45.3 0.0 1e-11 45.0 0.0 1.1 1 0 0 1 1 1 1 Microtubule binding SUR7 PF06687.12 NODE_62321_length_261_cov_2.699115_g54381_i0reverse_frame_2 - 0.2 11.3 7.7 0.24 11.0 7.7 1.2 1 0 0 1 1 1 0 SUR7/PalI family DUF5472 PF17566.2 NODE_62314_length_261_cov_2.946903_g54374_i0reverse_frame_3 - 0.021 14.8 0.1 0.028 14.4 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) UBM PF14377.6 NODE_62310_length_261_cov_3.194690_g54370_i0reverse_frame_3 - 0.0027 17.1 0.0 0.0037 16.6 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin binding region CAAX_1 PF15895.5 NODE_62310_length_261_cov_3.194690_g54370_i0reverse_frame_2 - 0.015 15.2 4.3 0.015 15.2 4.3 1.5 1 1 0 1 1 1 0 CAAX box cerebral protein 1 BDHCT PF08072.11 NODE_62310_length_261_cov_3.194690_g54370_i0forward_frame_2 - 0.036 14.2 0.0 0.089 12.9 0.0 1.6 1 0 0 1 1 1 0 BDHCT (NUC031) domain FKS1_dom1 PF14288.6 NODE_62310_length_261_cov_3.194690_g54370_i0forward_frame_2 - 0.19 12.0 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 PCSK9_C1 PF18459.1 NODE_62309_length_261_cov_3.283186_g54369_i0reverse_frame_3 - 0.028 14.5 2.6 0.039 14.1 2.6 1.2 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Integrase_Zn PF02022.19 NODE_62309_length_261_cov_3.283186_g54369_i0reverse_frame_2 - 0.12 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Integrase Zinc binding domain CPSF100_C PF13299.6 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_3 - 2.8 8.1 10.2 3.1 8.0 10.2 1.1 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal Mucin PF01456.17 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_3 - 4.4 7.3 15.9 5.1 7.1 15.9 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein RPN2_C PF18004.1 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_2 - 0.025 14.5 18.1 0.027 14.4 18.1 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain CobT PF06213.12 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_2 - 6.6 6.0 28.2 6.9 6.0 28.2 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT R_equi_Vir PF05526.11 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_2 - 7.6 6.3 8.2 8.3 6.2 8.2 1.2 1 0 0 1 1 1 0 Rhodococcus equi virulence-associated protein ABC2_membrane_3 PF12698.7 NODE_62307_length_261_cov_3.508850_g54367_i0forward_frame_2 - 5.3e-13 48.8 2.8 5.8e-13 48.7 2.8 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein Mem_trans PF03547.18 NODE_62307_length_261_cov_3.508850_g54367_i0forward_frame_2 - 0.064 11.6 1.0 0.064 11.6 1.0 1.3 1 1 0 1 1 1 0 Membrane transport protein IgaA PF07095.11 NODE_62303_length_261_cov_3.942478_g54363_i0forward_frame_3 - 0.039 11.9 0.2 0.046 11.7 0.2 1.0 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA Zn_protease PF05618.11 NODE_62302_length_261_cov_5.920354_g54362_i0reverse_frame_2 - 0.0053 16.6 0.1 0.0058 16.5 0.1 1.1 1 0 0 1 1 1 1 Putative ATP-dependant zinc protease YitT_membrane PF02588.15 NODE_62300_length_261_cov_32.393805_g54360_i0forward_frame_3 - 0.035 13.5 0.2 0.044 13.1 0.2 1.0 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Peptidase_C1 PF00112.23 NODE_62300_length_261_cov_32.393805_g54360_i0forward_frame_2 - 4.9e-10 39.9 2.3 5e-10 39.8 2.3 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_62300_length_261_cov_32.393805_g54360_i0forward_frame_2 - 0.00047 19.1 0.9 0.0006 18.7 0.9 1.1 1 0 0 1 1 1 1 Peptidase C1-like family TPR_MLP1_2 PF07926.12 NODE_62299_length_261_cov_34.438053_g54359_i0reverse_frame_3 - 0.00037 20.6 8.7 0.00049 20.2 8.7 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein V_ATPase_I PF01496.19 NODE_62299_length_261_cov_34.438053_g54359_i0reverse_frame_3 - 0.43 8.4 5.3 0.42 8.5 5.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family OrfA PF17495.2 NODE_62298_length_261_cov_37.256637_g54358_i0forward_frame_2 - 0.054 13.7 0.0 0.065 13.4 0.0 1.1 1 0 0 1 1 1 0 Vpr-like OrfA Ank_5 PF13857.6 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 0.0037 17.5 0.0 0.0054 17.0 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 0.016 15.6 0.3 0.033 14.6 0.0 1.6 2 0 0 2 2 2 0 Ankyrin repeat Ank_2 PF12796.7 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 0.03 14.9 0.0 0.065 13.8 0.0 1.3 1 1 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 0.06 13.9 0.0 0.14 12.8 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeat DUF4266 PF14086.6 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 5.4 8.0 8.7 13 6.8 8.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4266) SWIRM-assoc_2 PF16496.5 NODE_62292_length_261_cov_44.646018_g54352_i0reverse_frame_3 - 2.4 7.0 3.8 2.5 6.9 3.8 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal YajC PF02699.15 NODE_62289_length_261_cov_48.141593_g54349_i0forward_frame_3 - 0.21 11.5 2.0 0.34 10.8 0.2 1.9 2 0 0 2 2 2 0 Preprotein translocase subunit Renin_r PF07850.14 NODE_62289_length_261_cov_48.141593_g54349_i0forward_frame_2 - 0.006 17.1 0.1 0.0069 17.0 0.1 1.2 1 0 0 1 1 1 1 Renin receptor-like protein Aa_trans PF01490.18 NODE_62289_length_261_cov_48.141593_g54349_i0forward_frame_2 - 0.046 12.4 0.1 0.056 12.1 0.1 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Adeno_E3_15_3 PF03307.14 NODE_62288_length_261_cov_48.867257_g54348_i0reverse_frame_2 - 0.047 13.6 0.0 0.056 13.4 0.0 1.2 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region UPF1_Zn_bind PF09416.10 NODE_62283_length_261_cov_56.101770_g54343_i0reverse_frame_3 - 0.0034 17.4 1.2 0.0036 17.3 1.2 1.1 1 0 0 1 1 1 1 RNA helicase (UPF2 interacting domain) SPACA7 PF15307.6 NODE_62283_length_261_cov_56.101770_g54343_i0reverse_frame_2 - 0.086 13.1 0.7 0.093 13.0 0.7 1.0 1 0 0 1 1 1 0 Sperm acrosome-associated protein 7 DUF4122 PF13498.6 NODE_62279_length_261_cov_60.977876_g54339_i0forward_frame_3 - 0.22 11.2 3.0 0.25 11.0 3.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4122) DUF2117 PF09890.9 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_3 - 0.03 13.8 0.6 0.034 13.6 0.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2117) GerPC PF10737.9 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_2 - 0.0036 17.4 2.8 0.0041 17.2 2.8 1.1 1 0 0 1 1 1 1 Spore germination protein GerPC DUF1690 PF07956.11 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_2 - 0.01 16.3 5.9 0.012 16.0 5.9 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF883 PF05957.13 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_2 - 0.095 13.3 0.9 0.12 13.0 0.9 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) DMPK_coil PF08826.10 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_2 - 0.13 12.4 4.2 0.31 11.2 1.7 2.1 1 1 1 2 2 2 0 DMPK coiled coil domain like DsbB PF02600.16 NODE_62275_length_261_cov_67.477876_g54335_i0forward_frame_2 - 0.039 14.4 0.1 0.039 14.4 0.1 1.1 1 0 0 1 1 1 0 Disulfide bond formation protein DsbB FoP_duplication PF13865.6 NODE_62274_length_261_cov_71.761062_g54334_i0reverse_frame_2 - 2.4 8.7 9.3 3.5 8.2 4.4 2.1 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 Ribosomal_L37e PF01907.19 NODE_62272_length_261_cov_84.460177_g54332_i0forward_frame_2 - 0.085 13.0 7.4 0.044 13.9 5.8 1.5 1 1 0 1 1 1 0 Ribosomal protein L37e Asp4 PF16996.5 NODE_62270_length_261_cov_90.101770_g54330_i0forward_frame_3 - 0.12 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ribosomal_L2 PF00181.23 NODE_62268_length_261_cov_94.261062_g54328_i0forward_frame_2 - 0.023 14.6 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal Proteins L2, RNA binding domain Msg2_C PF12373.8 NODE_62266_length_261_cov_107.641593_g54326_i0reverse_frame_2 - 0.21 11.0 0.1 0.36 10.3 0.1 1.4 1 0 0 1 1 1 0 Major surface glycoprotein 2 C terminal Chordopox_L2 PF05803.12 NODE_62266_length_261_cov_107.641593_g54326_i0reverse_frame_2 - 0.27 11.1 10.3 0.38 10.6 10.3 1.3 1 0 0 1 1 1 0 Chordopoxvirus L2 protein MORN PF02493.20 NODE_62266_length_261_cov_107.641593_g54326_i0forward_frame_3 - 1.2e-05 24.9 19.8 9e-05 22.1 1.7 4.5 4 1 0 4 4 4 3 MORN repeat Hypoth_Ymh PF09509.10 NODE_62265_length_261_cov_109.818584_g54325_i0reverse_frame_3 - 0.021 14.7 0.0 0.024 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) Copper-fist PF00649.18 NODE_62264_length_261_cov_111.703540_g54324_i0forward_frame_3 - 0.027 14.0 1.4 0.044 13.3 1.4 1.3 1 0 0 1 1 1 0 Copper fist DNA binding domain NBD_C PF17042.5 NODE_62263_length_261_cov_114.960177_g54323_i0forward_frame_2 - 0.17 12.4 0.0 0.19 12.2 0.0 1.1 1 0 0 1 1 1 0 Nucleotide-binding C-terminal domain DUF3145 PF11343.8 NODE_62261_length_261_cov_119.845133_g54321_i0reverse_frame_3 - 0.037 13.6 0.0 0.042 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3145) Trp_leader2 PF08056.11 NODE_62261_length_261_cov_119.845133_g54321_i0forward_frame_3 - 0.099 12.6 2.5 0.15 12.1 2.5 1.2 1 0 0 1 1 1 0 Tryptophan operon leader peptide RD3 PF14473.6 NODE_62260_length_261_cov_121.938053_g54320_i0forward_frame_2 - 0.037 13.9 0.1 0.044 13.6 0.1 1.2 1 0 0 1 1 1 0 RD3 protein GCP5-Mod21 PF14609.6 NODE_62251_length_261_cov_239.389381_g54311_i0forward_frame_3 - 0.039 12.3 0.1 0.047 12.0 0.1 1.0 1 0 0 1 1 1 0 gamma-Tubulin ring complex non-core subunit mod21 HypD PF01924.16 NODE_62250_length_261_cov_295.765487_g54310_i0reverse_frame_3 - 1.5 7.8 5.0 1.9 7.5 4.9 1.2 1 1 0 1 1 1 0 Hydrogenase formation hypA family AP3D1 PF06375.11 NODE_62249_length_261_cov_299.362832_g54309_i0reverse_frame_3 - 0.039 14.2 5.2 0.037 14.3 5.2 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF4710 PF15828.5 NODE_62249_length_261_cov_299.362832_g54309_i0reverse_frame_3 - 3.8 7.7 16.6 5.1 7.3 16.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) GDP_Man_Dehyd PF16363.5 NODE_62243_length_261_cov_1108.991150_g54303_i0reverse_frame_2 - 9.3e-06 25.3 0.1 1e-05 25.2 0.1 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_62243_length_261_cov_1108.991150_g54303_i0reverse_frame_2 - 0.00024 20.6 0.0 0.00028 20.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family FeoB_Cyto PF17910.1 NODE_62243_length_261_cov_1108.991150_g54303_i0reverse_frame_2 - 0.017 15.7 0.0 0.021 15.4 0.0 1.2 1 0 0 1 1 1 0 FeoB cytosolic helical domain NAD_binding_4 PF07993.12 NODE_62243_length_261_cov_1108.991150_g54303_i0reverse_frame_2 - 0.031 13.5 0.0 0.036 13.2 0.0 1.1 1 0 0 1 1 1 0 Male sterility protein Kinetochor_Ybp2 PF08568.10 NODE_62243_length_261_cov_1108.991150_g54303_i0forward_frame_2 - 0.36 9.2 2.6 0.4 9.1 2.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family, YAP/Alf4/glomulin Anti-adapt_IraP PF10796.9 ORF99795 - 5.2e-32 110.2 1.6 5.8e-32 110.1 1.6 1.0 1 0 0 1 1 1 1 Sigma-S stabilisation anti-adaptor protein DUF2594 PF10769.9 ORF99795 - 0.00058 19.9 0.9 0.00083 19.3 0.7 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2594) SepF PF04472.12 ORF99795 - 0.0099 16.1 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 1 Cell division protein SepF MADF_DNA_bdg PF10545.9 ORF99716 - 0.022 15.1 0.6 0.027 14.8 0.6 1.2 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like VQ PF05678.14 ORF99656 - 0.12 11.9 1.5 0.26 10.8 1.5 1.6 1 0 0 1 1 1 0 VQ motif Herpes_UL21 PF03252.13 ORF98755 - 0.0065 15.3 0.0 0.0065 15.3 0.0 1.0 1 0 0 1 1 1 1 Herpesvirus UL21 Peptidase_C1 PF00112.23 ORF97172 - 3.2e-27 96.0 2.2 3.4e-27 95.9 2.2 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF97172 - 0.00038 19.4 0.5 0.00045 19.1 0.5 1.0 1 0 0 1 1 1 1 Peptidase C1-like family BRCT_assoc PF12820.7 ORF9703 - 0.023 14.5 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Serine-rich domain associated with BRCT DUF3889 PF13028.6 ORF96969 - 0.21 11.6 0.0 0.29 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3889) Pkinase PF00069.25 ORF96699 - 0.096 12.0 0.0 0.096 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Yae1_N PF09811.9 ORF95203 - 0.028 14.1 5.1 0.26 11.0 3.3 2.9 2 1 0 2 2 2 0 Essential protein Yae1, N terminal BNR_6 PF15899.5 ORF94948 - 0.0057 16.6 1.9 0.034 14.2 0.2 2.3 2 0 0 2 2 2 1 BNR-Asp box repeat Sortilin-Vps10 PF15902.5 ORF94948 - 0.14 10.9 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Sortilin, neurotensin receptor 3, Pkinase PF00069.25 ORF94774 - 2.3e-10 40.3 2.1 2.5e-10 40.2 1.6 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94774 - 2.9e-06 26.8 0.2 3.4e-06 26.5 0.2 1.2 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF94774 - 0.011 15.1 0.0 0.012 14.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Pkinase_fungal PF17667.1 ORF94774 - 0.013 14.3 0.4 0.014 14.2 0.4 1.3 1 1 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF94774 - 0.23 11.4 0.1 0.29 11.0 0.1 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family SOCS_box PF07525.16 ORF94709 - 0.35 11.3 3.9 0.86 10.0 3.7 1.8 1 1 0 1 1 1 0 SOCS box PT PF04886.12 ORF94156 - 0.0082 15.7 4.9 0.011 15.2 3.1 1.9 2 0 0 2 2 2 1 PT repeat Ribosomal_L38e PF01781.18 ORF94100 - 1.6e-20 73.0 3.1 1.9e-20 72.7 3.1 1.1 1 0 0 1 1 1 1 Ribosomal L38e protein family Thioredoxin PF00085.20 ORF93615 - 0.0014 18.6 0.1 0.0018 18.2 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin DUF736 PF05284.12 ORF93615 - 0.13 12.1 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF736) GGA_N-GAT PF18308.1 ORF92795 - 0.017 14.8 0.6 0.033 13.8 0.6 1.4 1 0 0 1 1 1 0 GGA N-GAT domain ANAPC2 PF08672.11 ORF92795 - 0.036 14.6 0.0 0.057 13.9 0.0 1.3 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 Fib_alpha PF08702.10 ORF92795 - 0.3 11.3 5.2 0.32 11.2 5.2 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family CKS PF01111.19 ORF92376 - 0.082 13.2 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit Pox_T4_N PF04491.12 ORF91953 - 0.087 12.7 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 Poxvirus T4 protein, N terminus Bac_export_2 PF01312.19 ORF91558 - 0.032 13.5 0.0 0.036 13.3 0.0 1.1 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family TFIIF_beta PF02270.15 ORF91405 - 0.062 13.5 0.3 0.11 12.6 0.3 1.4 1 1 0 1 1 1 0 TFIIF, beta subunit HTH domain YtpI PF14007.6 ORF91405 - 0.19 11.9 4.1 0.5 10.5 3.2 1.9 1 1 1 2 2 2 0 YtpI-like protein DUF1281 PF06924.11 ORF90871 - 0.0023 17.5 0.0 0.0025 17.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1281) Lac_bphage_repr PF06543.12 ORF9086 - 0.11 12.5 0.2 0.16 12.0 0.2 1.3 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor DASH_Dad4 PF08650.10 ORF9083 - 0.11 12.5 0.7 12 6.0 0.3 2.1 1 1 1 2 2 2 0 DASH complex subunit Dad4 ADH_zinc_N_2 PF13602.6 ORF89720 - 1.1e-10 42.7 0.0 1.3e-10 42.5 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF1959 PF09218.10 ORF89720 - 0.0061 16.7 0.1 0.0076 16.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1959) Ldh_1_C PF02866.18 ORF87529 - 1.3e-17 64.3 0.0 1.4e-17 64.2 0.0 1.0 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain MFS_1 PF07690.16 ORF8733 - 5.8e-14 51.8 9.3 6.6e-14 51.6 9.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Lac_bphage_repr PF06543.12 ORF86794 - 0.11 12.5 0.2 0.16 12.0 0.2 1.3 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor DUF4750 PF15938.5 ORF86655 - 0.075 12.7 0.7 0.075 12.7 0.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) UPF0242 PF06785.11 ORF85499 - 0.062 13.4 2.3 0.066 13.3 2.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus UPF0114 PF03350.16 ORF8496 - 0.023 14.9 1.9 0.033 14.4 1.9 1.4 1 1 0 1 1 1 0 Uncharacterized protein family, UPF0114 EcpB_C PF18649.1 ORF84609 - 0.089 12.8 1.4 0.092 12.7 0.6 1.6 1 1 0 1 1 1 0 EcpB C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks280.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks280.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks280.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks280.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PHBC_N PF12551.8 ORF84338 - 0.059 13.1 0.2 0.22 11.3 0.1 2.0 2 0 0 2 2 2 0 Poly-beta-hydroxybutyrate polymerase N terminal Defensin_5 PF18251.1 ORF84100 - 0.048 13.8 0.0 0.094 12.8 0.0 1.4 1 0 0 1 1 1 0 Fungal defensin Copsin Stm1_N PF09598.10 ORF8357 - 0.28 12.1 4.8 0.37 11.7 4.8 1.1 1 0 0 1 1 1 0 Stm1 RelB PF04221.12 ORF83351 - 2.1e-31 107.7 0.2 2.3e-31 107.6 0.2 1.0 1 0 0 1 1 1 1 RelB antitoxin DUF4169 PF13770.6 ORF83041 - 0.044 14.1 0.1 0.063 13.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4169) Ribosomal_L23eN PF03939.13 ORF82852 - 0.083 13.1 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain Cadherin_C_2 PF16492.5 ORF81423 - 0.0071 17.1 0.8 0.0087 16.8 0.8 1.1 1 0 0 1 1 1 1 Cadherin cytoplasmic C-terminal Shisa PF13908.6 ORF81423 - 0.0098 16.2 0.6 0.0099 16.1 0.6 1.0 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF4834 PF16118.5 ORF81423 - 0.078 14.0 0.7 0.086 13.8 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) RXLR PF16810.5 ORF81072 - 0.38 11.2 1.6 0.45 11.0 1.6 1.1 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity zf-RING_9 PF13901.6 ORF79681 - 0.021 14.8 0.3 0.027 14.5 0.2 1.3 1 1 0 1 1 1 0 Putative zinc-RING and/or ribbon Mtc PF03820.17 ORF79681 - 0.03 13.4 1.3 0.033 13.3 1.3 1.0 1 0 0 1 1 1 0 Tricarboxylate carrier Defensin_5 PF18251.1 ORF79514 - 0.048 13.8 0.0 0.094 12.8 0.0 1.4 1 0 0 1 1 1 0 Fungal defensin Copsin Ank_3 PF13606.6 ORF78468 - 0.00011 22.3 0.1 0.00021 21.5 0.1 1.5 1 0 0 1 1 1 1 Ankyrin repeat Ank_4 PF13637.6 ORF78468 - 0.0051 17.4 0.1 0.0095 16.5 0.1 1.4 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF78468 - 0.0051 17.2 0.2 0.0086 16.5 0.2 1.4 1 0 0 1 1 1 1 Ankyrin repeat Ank_2 PF12796.7 ORF78468 - 0.006 17.1 0.0 0.0087 16.6 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Tubulin PF00091.25 ORF78374 - 4.3e-15 56.4 0.0 4.8e-15 56.3 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain NPBW PF15180.6 ORF78299 - 0.15 11.9 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Neuropeptides B and W CAF-1_p60_C PF15512.6 ORF77423 - 0.1 13.0 2.4 0.11 13.0 2.4 1.3 1 1 0 1 1 1 0 Chromatin assembly factor complex 1 subunit p60, C-terminal CxC4 PF18717.1 ORF77123 - 0.031 14.1 1.9 0.036 13.9 1.9 1.1 1 0 0 1 1 1 0 CxC4 like cysteine cluster associated with KDZ transposases ig PF00047.25 ORF77123 - 0.056 13.6 0.1 0.47 10.6 0.0 2.0 1 1 1 2 2 2 0 Immunoglobulin domain DUF2237 PF09996.9 ORF77123 - 0.18 11.8 0.1 0.18 11.8 0.1 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2237) RNA_pol_L_2 PF13656.6 ORF7661 - 2.2e-09 37.0 0.2 3.4e-09 36.3 0.2 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 ORF7661 - 0.00027 20.3 0.0 0.00042 19.7 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain NUC153 PF08159.12 ORF76605 - 0.00095 18.9 0.4 0.0015 18.3 0.4 1.3 1 0 0 1 1 1 1 NUC153 domain PTPS PF01242.19 ORF76585 - 2.4e-20 72.7 0.0 2.6e-20 72.6 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Fer4_9 PF13187.6 ORF76582 - 0.00067 19.8 0.2 0.0011 19.1 0.2 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain ETF_QO PF05187.13 ORF76582 - 0.0011 19.1 0.0 0.0012 19.0 0.0 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_21 PF14697.6 ORF76582 - 0.0014 18.7 0.1 0.0024 17.9 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF76582 - 0.0019 18.7 0.3 0.0031 18.1 0.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_19 PF06902.11 ORF76582 - 0.021 14.9 0.0 0.038 14.1 0.0 1.4 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4 PF00037.27 ORF76582 - 0.036 13.9 2.7 0.18 11.7 1.1 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 ORF76582 - 0.039 14.1 2.4 0.039 14.1 2.4 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Rubella_E2 PF05749.11 ORF76582 - 0.05 13.1 0.1 0.051 13.0 0.1 1.1 1 0 0 1 1 1 0 Rubella membrane glycoprotein E2 Fer4_13 PF13370.6 ORF76582 - 0.14 12.7 2.8 2 9.0 1.3 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_10 PF13237.6 ORF76582 - 0.14 12.3 4.1 0.19 11.9 1.6 1.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF76582 - 0.47 11.1 3.6 3.2 8.5 2.9 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 ORF76582 - 1.2 9.4 4.4 5.3 7.3 2.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain 2OG-FeII_Oxy_3 PF13640.6 ORF75290 - 8.8e-07 29.7 0.0 1.1e-06 29.4 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily BsuBI_PstI_RE PF06616.11 ORF75290 - 0.06 12.6 0.0 0.066 12.5 0.0 1.1 1 0 0 1 1 1 0 BsuBI/PstI restriction endonuclease domain DUF1518 PF07469.12 ORF75142 - 0.47 10.9 5.7 0.36 11.3 3.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF1518) DUF1640 PF07798.11 ORF74907 - 0.029 14.4 3.1 0.031 14.3 3.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DUF2433 PF10360.9 ORF74907 - 0.029 14.5 0.9 0.034 14.3 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) zf-TRM13_CCCH PF11722.8 ORF74589 - 0.037 13.8 0.5 0.12 12.2 0.1 1.9 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein DUF1057 PF06342.12 ORF74431 - 0.028 13.5 0.1 0.03 13.4 0.1 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) His_Phos_1 PF00300.22 ORF7434 - 0.00059 19.6 0.0 0.00061 19.5 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) CytB6-F_Fe-S PF08802.10 ORF73946 - 0.18 11.8 0.4 0.18 11.8 0.4 2.2 2 1 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit Med16 PF11635.8 ORF736 - 3 5.7 5.8 2.6 5.8 5.8 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 RE_Eco29kI PF09517.10 ORF72967 - 0.044 13.4 0.8 0.049 13.3 0.8 1.2 1 0 0 1 1 1 0 Eco29kI restriction endonuclease DUF5564 PF17719.1 ORF72967 - 0.054 13.6 3.8 0.065 13.4 3.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5564) DUF639 PF04842.12 ORF72513 - 0.0096 15.4 0.7 0.0096 15.4 0.7 1.0 1 0 0 1 1 1 1 Plant protein of unknown function (DUF639) HR_lesion PF05514.11 ORF72513 - 0.069 13.3 0.2 0.078 13.2 0.2 1.1 1 0 0 1 1 1 0 HR-like lesion-inducing KRBA1 PF15287.6 ORF72360 - 0.16 11.7 0.8 0.33 10.7 0.1 1.9 2 0 0 2 2 2 0 KRBA1 family repeat Sec15 PF04091.12 ORF72057 - 0.0027 17.2 2.9 0.0028 17.1 2.9 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like SBDS_C PF09377.10 ORF72057 - 0.011 15.7 0.4 0.018 15.1 0.3 1.4 1 1 0 1 1 1 0 SBDS protein C-terminal domain LPD26 PF18842.1 ORF71807 - 0.071 13.1 0.0 0.094 12.7 0.0 1.4 1 0 0 1 1 1 0 Large polyvalent protein associated domain 26 Crystallin PF00525.18 ORF71075 - 0.069 13.3 1.9 9.1 6.5 0.4 2.2 2 0 0 2 2 2 0 Alpha crystallin A chain, N terminal DUF3263 PF11662.8 ORF71075 - 4.8 7.1 7.2 15 5.5 2.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3263) BACK PF07707.15 ORF71016 - 0.00033 20.7 0.5 0.005 16.9 0.1 2.0 1 1 1 2 2 2 1 BTB And C-terminal Kelch BTB PF00651.31 ORF71016 - 0.031 14.5 0.2 0.14 12.4 0.1 2.0 1 1 1 2 2 2 0 BTB/POZ domain TBP PF00352.21 ORF69042 - 0.02 14.9 0.0 0.025 14.5 0.0 1.2 1 0 0 1 1 1 0 Transcription factor TFIID (or TATA-binding protein, TBP) E1_UFD PF09358.10 ORF69042 - 0.12 13.1 0.0 0.13 13.0 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin fold domain Hydantoinase_A PF01968.18 ORF68930 - 0.044 13.0 0.0 0.051 12.8 0.0 1.1 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DUF3440 PF11922.8 ORF68628 - 0.026 14.2 0.2 0.035 13.8 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3440) Nudix_N_2 PF14803.6 ORF67683 - 8.9 6.3 10.6 13 5.8 2.1 2.8 2 2 0 2 2 2 0 Nudix N-terminal TPR_2 PF07719.17 ORF66836 - 1.9e-11 43.1 0.0 3.7e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF66836 - 3.7e-10 39.2 0.1 3.2e-05 23.5 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF66836 - 1.4e-07 31.1 0.2 0.00051 20.0 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF66836 - 6e-07 29.7 0.0 0.0052 17.1 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF66836 - 8.8e-07 28.5 0.1 3.6e-06 26.6 0.0 1.8 1 1 1 2 2 2 1 TPR repeat TPR_14 PF13428.6 ORF66836 - 1.9e-06 28.2 0.0 8.9e-05 23.0 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF66836 - 2.2e-06 28.2 0.0 2.8e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF66836 - 1.5e-05 24.7 0.0 0.032 14.1 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF66836 - 3.3e-05 24.2 0.5 0.064 13.9 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF66836 - 4.6e-05 23.5 0.1 0.00079 19.6 0.0 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat NARP1 PF12569.8 ORF66836 - 7.5e-05 21.8 0.2 9e-05 21.6 0.1 1.2 1 1 0 1 1 1 1 NMDA receptor-regulated protein 1 TPR_19 PF14559.6 ORF66836 - 8.2e-05 23.0 0.0 0.00014 22.3 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF66836 - 0.0002 21.3 1.2 0.0021 18.1 0.1 2.2 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 ORF66836 - 0.0014 18.5 0.0 0.26 11.4 0.0 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF66836 - 0.0057 16.8 0.1 0.0093 16.2 0.1 1.3 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 SRP_TPR_like PF17004.5 ORF66836 - 0.0073 16.3 0.8 0.01 15.8 0.8 1.3 1 1 0 1 1 1 1 Putative TPR-like repeat TPR_9 PF13371.6 ORF66836 - 0.02 15.0 0.0 0.022 14.9 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF627 PF04781.12 ORF66836 - 0.065 13.3 0.1 0.16 12.0 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF627) CPP1-like PF11833.8 ORF66118 - 0.062 13.0 0.1 0.064 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like COP-gamma_platf PF08752.10 ORF6564 - 1.4e-07 31.7 0.0 1.9e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Coatomer gamma subunit appendage platform subdomain DUF3889 PF13028.6 ORF65570 - 0.21 11.6 0.0 0.29 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3889) Dip PF17679.1 ORF65564 - 0.055 13.1 0.0 0.061 12.9 0.0 1.0 1 0 0 1 1 1 0 gp37/Dip protein Rtf2 PF04641.12 ORF65418 - 4.5e-18 65.6 2.7 4.9e-18 65.4 2.7 1.0 1 0 0 1 1 1 1 Rtf2 RING-finger ARS2 PF04959.13 ORF65418 - 0.0031 17.9 0.5 0.15 12.4 0.1 2.0 2 0 0 2 2 2 1 Arsenite-resistance protein 2 zf-Di19 PF05605.12 ORF65418 - 0.0084 16.4 0.2 0.24 11.7 0.1 2.3 2 0 0 2 2 2 1 Drought induced 19 protein (Di19), zinc-binding Prok-RING_4 PF14447.6 ORF65418 - 0.01 15.7 0.8 0.21 11.5 0.4 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-ribbon_3 PF13248.6 ORF65418 - 0.013 14.8 0.5 0.013 14.8 0.5 2.3 3 0 0 3 3 3 0 zinc-ribbon domain zf-C2H2 PF00096.26 ORF65418 - 0.015 15.7 0.4 0.051 14.1 0.4 1.9 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2HC_2 PF13913.6 ORF65418 - 0.027 14.4 0.9 0.059 13.3 0.3 1.9 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Zn-ribbon_8 PF09723.10 ORF65418 - 0.047 13.8 1.4 0.64 10.2 0.9 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zf-H2C2_2 PF13465.6 ORF65418 - 0.073 13.5 1.1 0.11 12.9 0.4 1.8 2 0 0 2 2 2 0 Zinc-finger double domain TF_Zn_Ribbon PF08271.12 ORF65418 - 1.9 8.1 6.2 3.9 7.1 4.8 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding zinc_ribbon_9 PF14369.6 ORF65418 - 4.6 7.6 6.5 1.3 9.4 0.2 2.4 3 0 0 3 3 2 0 zinc-ribbon CKS PF01111.19 ORF65034 - 2.8e-36 123.6 1.7 3.2e-36 123.4 1.7 1.0 1 0 0 1 1 1 1 Cyclin-dependent kinase regulatory subunit Pcc1 PF09341.10 ORF64589 - 1.7e-12 47.3 0.1 1.9e-12 47.1 0.1 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF4424 PF14415.6 ORF64589 - 0.025 13.9 0.1 0.027 13.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4424) PdaC PF13739.6 ORF64589 - 0.038 15.0 0.6 0.046 14.7 0.6 1.3 1 0 0 1 1 1 0 Deacetylase PdaC DUF3379 PF11859.8 ORF64589 - 0.067 12.5 0.2 0.069 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) SUD-M PF11633.8 ORF64332 - 0.1 12.3 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Single-stranded poly(A) binding domain MucBP_2 PF17965.1 ORF6431 - 0.022 15.3 0.3 0.027 15.0 0.3 1.2 1 0 0 1 1 1 0 Mucin binding domain zf-H2C2 PF09337.10 ORF64219 - 0.086 13.1 0.3 0.2 11.9 0.3 1.6 1 0 0 1 1 1 0 H2C2 zinc finger Mit_KHE1 PF10173.9 ORF63668 - 0.21 11.7 3.9 0.22 11.6 3.9 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related dUTPase PF00692.19 ORF63579 - 6.7e-31 106.7 0.0 7.3e-31 106.5 0.0 1.0 1 0 0 1 1 1 1 dUTPase Herpes_ORF11 PF04797.13 ORF63579 - 0.18 10.6 0.0 0.2 10.4 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus dUTPase protein DUF2207 PF09972.9 ORF6355 - 9.1 4.9 5.6 8 5.1 5.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Mpv17_PMP22 PF04117.12 ORF63210 - 1.1e-16 60.7 1.8 1.6e-16 60.3 1.8 1.2 1 0 0 1 1 1 1 Mpv17 / PMP22 family DUF1404 PF07185.11 ORF63210 - 0.043 13.5 0.1 0.072 12.8 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1404) Not3 PF04065.15 ORF6314 - 0.031 13.7 0.2 0.034 13.6 0.2 1.1 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component RhoGEF67_u2 PF16614.5 ORF62314 - 0.16 12.0 1.5 0.22 11.6 1.5 1.3 1 0 0 1 1 1 0 Unstructured region two on RhoGEF 6 and 7 MapZ_EC1 PF18041.1 ORF62285 - 0.021 15.0 0.2 0.028 14.7 0.2 1.2 1 0 0 1 1 1 0 MapZ extracellular domain 1 CBP_BcsG PF11658.8 ORF62285 - 0.033 12.6 0.1 0.033 12.6 0.1 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG IBD PF10416.9 ORF62285 - 0.071 13.1 3.0 0.13 12.3 1.4 1.9 1 1 1 2 2 2 0 Transcription-initiator DNA-binding domain IBD XhlA PF10779.9 ORF62285 - 0.081 13.1 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Haemolysin XhlA AbiJ_NTD3 PF18860.1 ORF62285 - 0.093 12.3 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 AbiJ N-terminal domain 3 TRAF_BIRC3_bd PF16673.5 ORF62285 - 0.097 12.5 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain Lac_bphage_repr PF06543.12 ORF62165 - 0.11 12.5 0.2 0.16 12.0 0.2 1.3 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor DUF5407 PF17401.2 ORF60894 - 0.0039 17.4 0.1 0.007 16.6 0.1 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5407) UCH_C PF18031.1 ORF59788 - 0.03 14.2 1.4 0.03 14.2 1.4 1.8 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolases Dynamin_N PF00350.23 ORF59269 - 4.8e-10 39.7 0.5 7.3e-10 39.2 0.5 1.3 1 0 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.23 ORF59269 - 0.039 14.0 0.1 0.061 13.4 0.1 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase ABC_tran PF00005.27 ORF59269 - 0.082 13.4 0.1 0.14 12.7 0.0 1.3 1 1 0 1 1 1 0 ABC transporter Dor1 PF04124.12 ORF59046 - 0.22 10.2 4.1 0.048 12.3 1.0 1.5 2 0 0 2 2 2 0 Dor1-like family AbiEi_4 PF13338.6 ORF58670 - 0.097 12.8 0.7 0.44 10.8 0.0 2.0 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin BEN PF10523.9 ORF58670 - 0.14 12.4 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 BEN domain ELMO_CED12 PF04727.13 ORF5786 - 0.82 9.8 3.6 0.95 9.5 3.6 1.1 1 0 0 1 1 1 0 ELMO/CED-12 family CTU2 PF10288.9 ORF57633 - 0.14 12.4 0.1 0.15 12.3 0.1 1.2 1 0 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 DUF898 PF05987.13 ORF55955 - 0.024 13.7 0.1 0.026 13.6 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) muHD PF10291.9 ORF55906 - 0.017 14.5 0.0 0.02 14.3 0.0 1.0 1 0 0 1 1 1 0 Muniscin C-terminal mu homology domain Glyco_hydro81C PF17652.1 ORF55783 - 0.056 12.7 0.0 0.059 12.6 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 81 C-terminal domain GST_N_3 PF13417.6 ORF55548 - 8.6e-19 67.7 0.0 1e-18 67.5 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF55548 - 2.4e-16 59.8 0.1 2.8e-16 59.6 0.1 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF55548 - 4.4e-14 52.5 0.0 5.6e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 ORF55548 - 0.0021 18.3 0.0 0.0027 17.9 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N_4 PF17172.4 ORF55548 - 0.0069 17.1 0.1 0.13 13.0 0.1 2.2 1 1 0 1 1 1 1 Glutathione S-transferase N-terminal domain NCOA_u2 PF16665.5 ORF55344 - 0.047 14.0 1.0 0.065 13.5 1.0 1.2 1 0 0 1 1 1 0 Unstructured region on nuclear receptor coactivator protein Pertus-S4-tox PF09275.10 ORF54452 - 0.058 13.7 0.0 0.058 13.7 0.0 1.1 1 0 0 1 1 1 0 Pertussis toxin S4 subunit Epiglycanin_TR PF05647.11 ORF54059 - 0.34 10.8 11.1 0.48 10.4 11.1 1.2 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like UPF0239 PF06783.11 ORF5335 - 0.015 15.5 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Peptidase_M56 PF05569.11 ORF5335 - 0.1 11.7 0.1 0.14 11.3 0.1 1.3 1 1 0 1 1 1 0 BlaR1 peptidase M56 Sugarporin_N PF11471.8 ORF53226 - 0.0031 17.4 0.1 0.051 13.5 0.1 2.2 2 0 0 2 2 2 1 Maltoporin periplasmic N-terminal extension HU-CCDC81_bac_2 PF18175.1 ORF53226 - 0.021 14.7 0.1 0.048 13.5 0.1 1.6 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 LPD1 PF18796.1 ORF53226 - 0.066 13.3 0.1 0.078 13.1 0.1 1.2 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 1 MinE PF03776.14 ORF53226 - 0.12 12.4 0.5 0.72 9.9 0.1 2.0 2 0 0 2 2 2 0 Septum formation topological specificity factor MinE Lipoxygenase PF00305.19 ORF5319 - 0.19 10.1 0.1 0.2 10.0 0.1 1.0 1 0 0 1 1 1 0 Lipoxygenase DUF4448 PF14610.6 ORF52936 - 0.0097 15.7 0.0 0.011 15.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4448) DUF5305 PF17231.2 ORF52936 - 0.011 15.1 0.0 0.012 15.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF2207 PF09972.9 ORF52936 - 0.022 13.5 0.0 0.022 13.5 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TMEM171 PF15471.6 ORF52936 - 0.044 12.8 0.0 0.048 12.7 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein family 171 Vpu PF00558.19 ORF52936 - 0.14 11.9 0.4 0.19 11.5 0.3 1.3 1 1 0 1 1 1 0 Vpu protein CAP-ZIP_m PF15255.6 ORF52609 - 0.024 14.9 0.1 0.038 14.2 0.0 1.4 1 1 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region YtpI PF14007.6 ORF52609 - 0.059 13.5 0.1 0.093 12.9 0.1 1.4 1 0 0 1 1 1 0 YtpI-like protein Ribosomal_L37 PF08561.10 ORF52034 - 0.26 11.8 0.1 0.36 11.4 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L37 DUF2628 PF10947.8 ORF50812 - 0.11 12.9 0.8 0.15 12.5 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) UPF0242 PF06785.11 ORF50812 - 4.4 7.4 6.4 5.1 7.2 6.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus RAI1 PF08652.11 ORF50586 - 0.014 15.5 0.5 0.05 13.8 0.1 1.8 2 0 0 2 2 2 0 RAI1 like PD-(D/E)XK nuclease TNV_CP PF03898.13 ORF50586 - 0.21 10.8 0.0 0.24 10.6 0.0 1.2 1 0 0 1 1 1 0 Satellite tobacco necrosis virus coat protein ATP12 PF07542.11 ORF49755 - 0.089 12.9 0.0 0.091 12.8 0.0 1.1 1 0 0 1 1 1 0 ATP12 chaperone protein PEHE PF15275.6 ORF49755 - 1.5 9.4 5.7 1.8 9.2 5.7 1.3 1 1 0 1 1 1 0 PEHE domain MORN PF02493.20 ORF49675 - 3.6e-11 42.3 24.7 0.00062 19.5 3.0 4.1 4 0 0 4 4 4 3 MORN repeat Zap1_zf2 PF18217.1 ORF49675 - 0.021 14.8 2.5 0.18 11.9 0.4 2.4 2 0 0 2 2 2 0 Zap1 zinc finger 2 DUF448 PF04296.13 ORF49675 - 0.25 11.2 2.4 1.2 9.1 0.1 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF448) SpmSyn_N PF17950.1 ORF49306 - 0.043 14.0 0.0 0.051 13.8 0.0 1.1 1 0 0 1 1 1 0 S-adenosylmethionine decarboxylase N -terminal VASt PF16016.5 ORF48846 - 0.15 12.5 0.0 0.18 12.2 0.0 1.2 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain ROF PF07073.12 ORF48347 - 2e-28 98.3 0.1 2.3e-28 98.2 0.1 1.0 1 0 0 1 1 1 1 Modulator of Rho-dependent transcription termination (ROF) Peptidase_C74 PF12387.8 ORF47844 - 0.0062 16.0 1.4 0.0074 15.8 1.4 1.1 1 0 0 1 1 1 1 Pestivirus NS2 peptidase ACDC PF14733.6 ORF47052 - 0.015 15.6 0.4 0.028 14.7 0.4 1.5 1 1 0 1 1 1 0 AP2-coincident C-terminal Lipoprotein_19 PF13617.6 ORF46552 - 0.094 12.5 0.5 0.14 11.9 0.5 1.3 1 0 0 1 1 1 0 YnbE-like lipoprotein Nop52 PF05997.12 ORF46341 - 0.074 12.8 0.1 0.089 12.6 0.1 1.1 1 0 0 1 1 1 0 Nucleolar protein,Nop52 2Fe-2S_Ferredox PF11591.8 ORF46239 - 0.015 15.1 0.9 0.015 15.1 0.9 1.7 2 0 0 2 2 2 0 Ferredoxin chloroplastic transit peptide SlpA PF03217.14 ORF46042 - 0.14 12.8 0.1 0.2 12.3 0.1 1.2 1 0 0 1 1 1 0 Surface later protein A domain KRBA1 PF15287.6 ORF45915 - 0.16 11.7 0.8 0.33 10.7 0.1 1.9 2 0 0 2 2 2 0 KRBA1 family repeat Ycf70 PF17382.2 ORF45273 - 0.25 11.8 0.2 0.25 11.8 0.2 1.9 1 1 2 3 3 3 0 Uncharacterized Ycf70-like Neuropep_like PF15161.6 ORF44474 - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Neuropeptide-like TspO_MBR PF03073.15 ORF44044 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family CRAL_TRIO PF00650.20 ORF4374 - 1.1e-06 28.4 0.0 1.2e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain DUF3440 PF11922.8 ORF42948 - 0.026 14.2 0.2 0.035 13.8 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3440) Pcc1 PF09341.10 ORF428 - 1.7e-12 47.3 0.1 1.9e-12 47.1 0.1 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF4424 PF14415.6 ORF428 - 0.025 13.9 0.1 0.027 13.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4424) PdaC PF13739.6 ORF428 - 0.038 15.0 0.6 0.046 14.7 0.6 1.3 1 0 0 1 1 1 0 Deacetylase PdaC DUF3379 PF11859.8 ORF428 - 0.067 12.5 0.2 0.069 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) Mito_carr PF00153.27 ORF4247 - 0.0047 16.8 0.0 0.0051 16.7 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein Ion_trans PF00520.31 ORF41888 - 2.1 7.5 5.0 3.1 6.9 5.0 1.5 1 1 0 1 1 1 0 Ion transport protein DUF678 PF05077.12 ORF41704 - 0.0037 17.4 1.2 0.01 16.0 0.5 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF678) C_tripleX PF02363.19 ORF41518 - 4.5 7.8 7.9 35 5.0 0.1 2.2 2 0 0 2 2 2 0 Cysteine rich repeat TspO_MBR PF03073.15 ORF40666 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family TspO_MBR PF03073.15 ORF40631 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family CTD_bind PF04818.13 ORF40166 - 0.031 15.1 0.1 5.2 8.0 0.0 2.4 2 1 0 2 2 2 0 RNA polymerase II-binding domain. CmlA_N PF18456.1 ORF40166 - 0.057 12.7 0.0 0.065 12.5 0.0 1.1 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain RhoGEF67_u2 PF16614.5 ORF39625 - 0.16 12.0 1.5 0.22 11.6 1.5 1.3 1 0 0 1 1 1 0 Unstructured region two on RhoGEF 6 and 7 VQ PF05678.14 ORF39505 - 0.12 11.9 1.5 0.26 10.8 1.5 1.6 1 0 0 1 1 1 0 VQ motif TP2 PF01254.18 ORF38487 - 0.18 12.4 6.3 0.19 12.3 6.3 1.0 1 0 0 1 1 1 0 Nuclear transition protein 2 ArAE_2 PF10334.9 ORF38487 - 0.19 11.5 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Aromatic acid exporter family member 2 UCH_C PF18031.1 ORF38450 - 0.03 14.2 1.4 0.03 14.2 1.4 1.8 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolases MORN PF02493.20 ORF38235 - 7.2e-19 66.5 21.4 7.5e-09 35.0 0.8 4.8 5 0 0 5 5 5 4 MORN repeat Sugar_tr PF00083.24 ORF38115 - 5.1e-09 35.5 0.2 5.5e-09 35.4 0.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Prok-TraM PF09228.10 ORF37666 - 0.0095 16.3 0.0 0.012 16.0 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic Transcriptional repressor TraM Hrs_helical PF12210.8 ORF37666 - 0.061 13.9 0.0 0.066 13.8 0.0 1.1 1 0 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Lac_bphage_repr PF06543.12 ORF35078 - 0.11 12.5 0.2 0.16 12.0 0.2 1.3 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor DUF2760 PF10816.8 ORF34778 - 0.09 12.6 0.0 0.094 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2760) TspO_MBR PF03073.15 ORF34436 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family F-box-like PF12937.7 ORF34298 - 0.00019 21.3 0.0 0.00028 20.7 0.0 1.2 1 0 0 1 1 1 1 F-box-like F-box_4 PF15966.5 ORF34298 - 0.05 13.5 0.0 0.074 12.9 0.0 1.3 1 0 0 1 1 1 0 F-box F-box PF00646.33 ORF34298 - 0.062 13.2 0.0 0.089 12.7 0.0 1.2 1 0 0 1 1 1 0 F-box domain GGA_N-GAT PF18308.1 ORF34215 - 0.017 14.8 0.6 0.033 13.8 0.6 1.4 1 0 0 1 1 1 0 GGA N-GAT domain ANAPC2 PF08672.11 ORF34215 - 0.036 14.6 0.0 0.057 13.9 0.0 1.3 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 Fib_alpha PF08702.10 ORF34215 - 0.3 11.3 5.2 0.32 11.2 5.2 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_C1 PF00112.23 ORF34114 - 3.2e-27 96.0 2.2 3.4e-27 95.9 2.2 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF34114 - 0.00038 19.4 0.5 0.00045 19.1 0.5 1.0 1 0 0 1 1 1 1 Peptidase C1-like family tRNA-synt_2 PF00152.20 ORF33803 - 1.4e-21 76.9 0.1 1.5e-21 76.8 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) ORF_12_N PF18042.1 ORF33764 - 0.029 14.8 0.0 0.033 14.6 0.0 1.1 1 0 0 1 1 1 0 ORF 12 gene product N-terminal SPOB_a PF14689.6 ORF31909 - 0.024 14.3 0.0 0.04 13.6 0.0 1.3 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain SPOB_a PF14689.6 ORF31841 - 0.024 14.3 0.0 0.04 13.6 0.0 1.3 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain ABC2_membrane_2 PF12679.7 ORF31525 - 0.14 11.5 4.9 0.14 11.5 4.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4207 PF13904.6 ORF31135 - 0.5 10.0 28.3 1.5 8.4 28.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4207) Rtt102p PF09510.10 ORF31135 - 1.6 9.0 12.2 2 8.6 12.2 1.2 1 0 0 1 1 1 0 Rtt102p-like transcription regulator protein TspO_MBR PF03073.15 ORF3098 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family DUF3437 PF11919.8 ORF30897 - 0.099 12.6 0.1 0.17 11.8 0.0 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3437) GCM PF03615.15 ORF28931 - 0.0087 15.9 0.1 0.01 15.7 0.1 1.2 1 0 0 1 1 1 1 GCM motif protein Herpes_capsid PF06112.11 ORF28908 - 1.3 9.1 9.2 1.5 8.8 9.2 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein zf-met PF12874.7 ORF28719 - 0.017 15.5 1.8 0.017 15.5 1.8 2.0 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 ORF28719 - 0.025 15.0 2.3 0.025 15.0 2.3 2.5 3 0 0 3 3 3 0 Zinc finger, C2H2 type DEC-1_N PF04625.13 ORF28719 - 0.032 13.3 0.3 0.036 13.1 0.3 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region zf-C2H2_6 PF13912.6 ORF28719 - 0.041 13.9 2.1 0.071 13.1 2.1 1.4 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_4 PF13894.6 ORF28719 - 0.52 11.3 5.6 0.53 11.3 1.3 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger ACT_5 PF13710.6 ORF28536 - 0.84 9.5 5.9 0.18 11.7 1.3 1.9 2 0 0 2 2 2 0 ACT domain DNA_pol_A_exo1 PF01612.20 ORF28310 - 2.5e-05 24.1 0.0 3e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 3'-5' exonuclease Ank_2 PF12796.7 ORF27404 - 0.00097 19.7 0.0 0.0023 18.5 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF27404 - 0.0015 19.1 0.1 0.0035 17.9 0.1 1.7 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF27404 - 0.0026 18.0 0.1 0.0037 17.5 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF27404 - 0.015 15.8 0.0 0.059 13.9 0.0 1.9 2 0 0 2 2 2 0 Ankyrin repeat Xpo1 PF08389.12 ORF27266 - 0.004 17.2 0.0 0.096 12.7 0.0 1.9 1 1 1 2 2 2 2 Exportin 1-like protein Cse1 PF08506.10 ORF27266 - 0.028 13.2 0.0 0.04 12.7 0.0 1.2 1 0 0 1 1 1 0 Cse1 SgrT PF15894.5 ORF26749 - 0.024 14.6 0.1 0.047 13.7 0.1 1.6 1 1 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT RRM_1 PF00076.22 ORF26626 - 6.6e-19 67.5 0.0 7.9e-19 67.3 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF26626 - 2.1e-07 30.6 0.0 2.4e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF26626 - 0.0098 16.0 0.0 0.038 14.1 0.0 1.8 1 1 0 1 1 1 1 RNA recognition motif PHM7_cyt PF14703.6 ORF26626 - 0.022 15.0 0.0 0.57 10.4 0.0 2.0 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter RRM_occluded PF16842.5 ORF26626 - 0.097 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Occluded RNA-recognition motif TTc_toxin_rep PF18807.1 ORF26526 - 0.12 12.2 0.1 0.34 10.8 0.0 1.7 2 0 0 2 2 2 0 Tripartite Tc toxins repeat Alpha_kinase PF02816.18 ORF26494 - 4.3e-15 56.3 0.1 5e-15 56.1 0.1 1.0 1 0 0 1 1 1 1 Alpha-kinase family DUF1057 PF06342.12 ORF25625 - 0.02 13.9 0.1 0.021 13.8 0.1 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) RhgB_N PF09284.10 ORF25526 - 0.022 14.3 1.0 0.023 14.2 1.0 1.0 1 0 0 1 1 1 0 Rhamnogalacturonan lyase B, N-terminal UNC-79 PF14776.6 ORF25422 - 0.039 12.7 0.0 0.043 12.6 0.0 1.0 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 DUF898 PF05987.13 ORF25178 - 0.024 13.7 0.1 0.026 13.6 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) SafA PF17073.5 ORF24963 - 0.063 13.2 0.2 0.38 10.7 0.1 2.0 1 1 1 2 2 2 0 Two-component-system connector protein Kelch_4 PF13418.6 ORF24207 - 0.021 14.8 0.0 0.079 13.0 0.0 1.9 2 1 0 2 2 2 0 Galactose oxidase, central domain MgrB PF13998.6 ORF24098 - 0.027 14.4 0.0 0.057 13.3 0.0 1.5 1 0 0 1 1 1 0 MgrB protein Spermine_synth PF01564.17 ORF23639 - 0.036 13.5 0.1 0.04 13.3 0.1 1.0 1 0 0 1 1 1 0 Spermine/spermidine synthase domain Arg_decarbox_C PF17944.1 ORF23243 - 0.16 12.6 0.0 0.23 12.1 0.0 1.5 1 1 0 1 1 1 0 Arginine decarboxylase C-terminal helical extension COPIIcoated_ERV PF07970.12 ORF23238 - 2.4e-08 34.1 0.1 2.5e-08 34.0 0.1 1.1 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter TspO_MBR PF03073.15 ORF21829 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family DUF5572 PF17733.1 ORF21499 - 1.2 9.0 4.2 0.33 10.8 0.7 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5572) DUF1189 PF06691.11 ORF20915 - 0.14 11.7 6.5 0.15 11.6 6.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) Phage_int_SAM_3 PF14659.6 ORF2090 - 0.027 14.8 0.2 0.32 11.3 0.0 2.1 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain Adhesin_E PF16747.5 ORF2090 - 0.036 14.1 0.1 0.041 13.9 0.1 1.1 1 0 0 1 1 1 0 Surface-adhesin protein E DUF1096 PF06493.11 ORF20153 - 0.22 12.0 7.3 0.32 11.5 7.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1096) TspO_MBR PF03073.15 ORF19949 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family ScdA_N PF04405.14 ORF19802 - 0.056 13.1 0.2 0.32 10.7 0.0 1.9 2 0 0 2 2 2 0 Domain of Unknown function (DUF542) PARG_cat PF05028.14 ORF19679 - 0.026 13.8 1.9 0.026 13.8 1.9 1.4 1 1 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) YukD PF08817.10 ORF19118 - 0.0075 16.9 0.0 0.011 16.4 0.0 1.2 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD BCMA-Tall_bind PF09257.10 ORF18510 - 0.0099 15.9 1.1 0.017 15.2 1.1 1.4 1 0 0 1 1 1 1 BCMA, TALL-1 binding 2Fe-2S_Ferredox PF11591.8 ORF1848 - 0.14 12.1 4.8 2.5 8.0 0.2 2.5 2 0 0 2 2 2 0 Ferredoxin chloroplastic transit peptide tRNA-synt_1e PF01406.19 ORF18455 - 0.1 11.9 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain Fez1 PF06818.15 ORF16452 - 0.0015 19.0 6.8 0.002 18.6 6.8 1.2 1 0 0 1 1 1 1 Fez1 LepB_GAP_N PF18172.1 ORF16452 - 0.004 17.1 3.0 0.0047 16.9 3.0 1.0 1 0 0 1 1 1 1 LepB GAP domain N-terminal subdomain DUF641 PF04859.12 ORF16452 - 0.011 16.1 4.8 0.013 15.8 4.8 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) PdaC PF13739.6 ORF16452 - 8.9 7.4 8.8 4.3 8.4 4.5 2.0 1 1 1 2 2 2 0 Deacetylase PdaC TspO_MBR PF03073.15 ORF16375 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family O-ag_pol_Wzy PF14296.6 ORF1576 - 0.079 11.6 9.1 0.093 11.4 9.1 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy DUF326 PF03860.16 ORF15274 - 0.11 12.5 1.7 0.19 11.8 1.7 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF326) SafA PF17073.5 ORF14528 - 0.063 13.2 0.2 0.38 10.7 0.1 2.0 1 1 1 2 2 2 0 Two-component-system connector protein Bacteriocin_IIc PF10439.9 ORF14211 - 0.013 15.6 0.2 0.019 15.1 0.2 1.2 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Ribosomal_L44 PF00935.19 ORF13880 - 5.3e-20 71.7 8.8 5.3e-20 71.7 8.8 1.7 1 1 1 2 2 2 1 Ribosomal protein L44 YyzF PF14116.6 ORF13880 - 0.083 12.9 0.3 0.14 12.2 0.3 1.3 1 0 0 1 1 1 0 YyzF-like protein TspO_MBR PF03073.15 ORF13867 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family DUF2373 PF10180.9 ORF13791 - 0.023 14.5 0.9 0.049 13.5 0.2 1.8 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2373) DUF3113 PF11310.8 ORF13791 - 0.12 12.3 0.9 0.31 11.0 0.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3113) EPF PF17181.4 ORF1373 - 0.057 13.4 3.7 0.13 12.3 3.7 1.7 1 0 0 1 1 1 0 Epidermal patterning factor proteins TMEM251 PF15190.6 ORF12719 - 0.041 13.8 4.3 0.049 13.6 4.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 251 Glyco_transf_24 PF18404.1 ORF12134 - 3.3e-29 102.1 2.9 3.8e-29 101.9 2.9 1.0 1 0 0 1 1 1 1 Glucosyltransferase 24 PurL_C PF16904.5 ORF11639 - 0.016 15.5 0.1 0.02 15.2 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosylformylglycinamidine synthase II C-terminus zf-RING_2 PF13639.6 ORF11435 - 2.8e-12 46.8 11.0 3.7e-12 46.4 11.0 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF11435 - 2.3e-09 37.0 10.8 3.4e-09 36.4 10.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF11435 - 3e-09 37.0 12.0 8.7e-09 35.5 12.0 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF11435 - 2.7e-07 30.2 9.2 3e-07 30.1 4.4 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF11435 - 1.3e-06 28.2 8.1 1.7e-06 27.8 8.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF11435 - 2e-06 27.6 12.4 3.3e-06 26.9 12.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF11435 - 4.8e-06 26.5 10.1 1.7e-05 24.7 3.4 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF11435 - 1.2e-05 25.1 10.0 1.8e-05 24.6 10.0 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF11435 - 3.5e-05 23.4 7.2 5.1e-05 22.8 7.2 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF11435 - 6.1e-05 23.0 6.7 0.00011 22.2 6.7 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF11435 - 9.5e-05 22.2 8.8 0.00015 21.5 8.8 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3H2C3 PF17122.5 ORF11435 - 0.00028 20.9 5.0 0.00055 19.9 5.0 1.5 1 1 0 1 1 1 1 Zinc-finger zf-Nse PF11789.8 ORF11435 - 0.0061 16.4 5.9 0.0088 15.8 5.9 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zinc_ribbon_16 PF17034.5 ORF11435 - 0.016 15.4 7.6 0.031 14.5 7.6 1.8 1 1 0 1 1 1 0 Zinc-ribbon like family YdjO PF14169.6 ORF11435 - 0.018 14.8 2.8 0.13 12.0 0.8 2.3 2 0 0 2 2 2 0 Cold-inducible protein YdjO RINGv PF12906.7 ORF11435 - 0.023 14.8 9.4 0.063 13.4 9.4 1.8 1 1 0 1 1 1 0 RING-variant domain zf-RING_6 PF14835.6 ORF11435 - 0.038 13.9 1.6 0.053 13.4 1.6 1.2 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-C3HC4_4 PF15227.6 ORF11435 - 0.041 14.1 5.2 0.27 11.4 5.6 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zinc-ribbons_6 PF07191.12 ORF11435 - 0.042 13.8 5.3 0.07 13.1 5.3 1.4 1 0 0 1 1 1 0 zinc-ribbons zf-RING_4 PF14570.6 ORF11435 - 0.1 12.4 5.3 0.17 11.7 5.3 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-Di19 PF05605.12 ORF11435 - 0.12 12.7 7.6 2.4 8.5 0.6 2.3 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding FANCL_C PF11793.8 ORF11435 - 0.17 12.1 9.7 1.7 8.9 9.7 2.4 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_10 PF16685.5 ORF11435 - 0.39 10.9 8.9 0.29 11.3 7.0 1.8 2 0 0 2 2 2 0 zinc RING finger of MSL2 Zf_RING PF16744.5 ORF11435 - 0.64 10.2 7.5 0.42 10.8 5.1 1.9 1 1 1 2 2 2 0 KIAA1045 RING finger zf-RING-like PF08746.11 ORF11435 - 2.9 8.3 10.2 7.6 6.9 10.2 1.7 1 1 0 1 1 1 0 RING-like domain Ank_2 PF12796.7 ORF11398 - 1e-13 51.6 0.0 1.3e-13 51.3 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF11398 - 3.7e-12 46.5 0.0 7e-09 36.1 0.0 1.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF11398 - 3.1e-11 42.4 0.0 3.1e-05 24.0 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF11398 - 1e-09 38.5 0.0 2.2e-05 24.6 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF11398 - 2.1e-09 37.4 0.0 0.0015 18.9 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat CTU2 PF10288.9 ORF11378 - 0.14 12.4 0.1 0.15 12.3 0.1 1.2 1 0 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Proteasome PF00227.26 ORF112520 - 6e-08 32.4 0.1 7.1e-08 32.2 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Croc_4 PF17691.1 ORF112454 - 0.04 14.0 0.6 0.042 13.9 0.6 1.1 1 0 0 1 1 1 0 Contingent replication of cDNA 4 Pkinase PF00069.25 ORF112157 - 6.9e-16 58.4 0.1 7.1e-16 58.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF112157 - 4e-06 26.3 0.0 4.5e-06 26.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF112157 - 0.008 16.1 0.0 0.011 15.7 0.0 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF112157 - 0.016 14.5 0.0 0.022 14.1 0.0 1.2 1 1 0 1 1 1 0 Kinase-like SafA PF17073.5 ORF112147 - 0.063 13.2 0.2 0.38 10.7 0.1 2.0 1 1 1 2 2 2 0 Two-component-system connector protein PPR_2 PF13041.6 ORF112085 - 1.9e-09 37.5 0.0 0.0012 19.0 0.0 2.1 2 0 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF112085 - 7.1e-06 26.0 0.0 1.4e-05 25.1 0.0 1.5 1 1 0 1 1 1 1 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF112085 - 0.054 12.8 0.0 0.06 12.7 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF112085 - 0.081 12.6 3.8 1.4 8.7 0.2 3.2 3 0 0 3 3 3 0 PPR repeat MFS_1 PF07690.16 ORF11199 - 1.5e-05 24.1 9.1 1.6e-05 24.0 9.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF11199 - 0.0018 17.2 6.9 0.002 17.1 6.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF423 PF04241.15 ORF11199 - 1.3 9.3 6.9 6.9 7.0 2.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF423) zf-H2C2 PF09337.10 ORF111141 - 0.086 13.1 0.3 0.2 11.9 0.3 1.6 1 0 0 1 1 1 0 H2C2 zinc finger zinc_ribbon_4 PF13717.6 ORF110630 - 2.3 8.2 7.8 18 5.4 7.8 2.1 1 1 0 1 1 1 0 zinc-ribbon domain CSN5_C PF18323.1 ORF110582 - 3.4e-09 37.5 0.4 4.2e-09 37.2 0.4 1.1 1 0 0 1 1 1 1 Cop9 signalosome subunit 5 C-terminal domain NRDE-2 PF08424.10 ORF110269 - 0.08 12.1 0.1 0.08 12.1 0.1 1.0 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference Pcc1 PF09341.10 ORF110170 - 1.7e-12 47.3 0.1 1.9e-12 47.1 0.1 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF4424 PF14415.6 ORF110170 - 0.025 13.9 0.1 0.027 13.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4424) PdaC PF13739.6 ORF110170 - 0.038 15.0 0.6 0.046 14.7 0.6 1.3 1 0 0 1 1 1 0 Deacetylase PdaC DUF3379 PF11859.8 ORF110170 - 0.067 12.5 0.2 0.069 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) DUF2227 PF09988.9 ORF109666 - 0.14 12.0 0.2 4.4 7.1 0.0 2.0 1 1 1 2 2 2 0 Uncharacterized metal-binding protein (DUF2227) PBP1_TM PF14812.6 ORF109199 - 2.7 8.4 5.4 0.65 10.4 2.7 1.4 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal LAT PF15234.6 ORF109199 - 4.9 6.8 14.8 5 6.8 14.8 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells DUF1835 PF08874.10 ORF108960 - 0.068 13.4 0.2 0.074 13.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1835) DUF4801 PF16059.5 ORF107828 - 0.089 12.8 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) UCH_C PF18031.1 ORF107620 - 0.03 14.2 1.4 0.03 14.2 1.4 1.8 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolases CSG2 PF16965.5 ORF107313 - 0.016 14.2 0.3 0.016 14.2 0.3 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator DUF4834 PF16118.5 ORF107313 - 0.017 16.0 0.1 0.02 15.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) V_ATPase_I PF01496.19 ORF107313 - 0.032 12.2 0.4 0.038 11.9 0.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family O-antigen_lig PF13425.6 ORF107313 - 0.05 12.4 0.2 0.053 12.3 0.2 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Tmemb_9 PF05434.11 ORF107313 - 0.079 12.9 0.2 0.094 12.6 0.2 1.2 1 1 0 1 1 1 0 TMEM9 WavE PF07507.11 ORF107206 - 0.026 13.7 0.0 0.027 13.6 0.0 1.1 1 0 0 1 1 1 0 WavE lipopolysaccharide synthesis AAA_21 PF13304.6 ORF106657 - 3.6e-06 27.0 0.5 4.9e-06 26.6 0.5 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 ORF106657 - 0.001 17.8 0.0 0.001 17.8 0.0 1.0 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 ORF106657 - 0.0025 17.3 0.1 0.003 17.0 0.1 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF106657 - 0.0066 16.2 0.8 0.0088 15.8 0.8 1.1 1 0 0 1 1 1 1 AAA ATPase domain DUF2326 PF10088.9 ORF106657 - 0.14 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2326) RNA_POL_M_15KD PF02150.16 ORF106645 - 0.022 14.7 0.4 0.039 13.8 0.4 1.4 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit Dpy-30 PF05186.13 ORF10664 - 0.0029 17.2 0.0 0.0046 16.6 0.0 1.3 1 0 0 1 1 1 1 Dpy-30 motif DUF5345 PF17280.2 ORF106627 - 0.01 15.8 0.7 0.013 15.4 0.2 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5345) ETRAMP PF09716.10 ORF106627 - 4.8 7.3 4.9 19 5.4 4.9 1.9 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) UCR_14kD PF02271.16 ORF106590 - 0.051 13.5 0.1 0.14 12.2 0.0 1.6 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase complex 14kD subunit Swi3 PF07962.12 ORF106343 - 0.047 13.7 0.1 0.06 13.3 0.1 1.2 1 0 0 1 1 1 0 Replication Fork Protection Component Swi3 DUF1645 PF07816.11 ORF106325 - 0.014 16.0 0.9 0.016 15.8 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1645) YMF19 PF02326.15 ORF105971 - 0.61 10.9 2.8 0.54 11.1 2.0 1.4 1 1 1 2 2 2 0 Plant ATP synthase F0 IGF2_C PF08365.11 ORF105872 - 0.024 14.6 1.0 0.029 14.4 0.2 1.6 2 0 0 2 2 2 0 Insulin-like growth factor II E-peptide PapG_C PF03628.13 ORF1050 - 0.16 11.9 0.0 0.22 11.4 0.0 1.3 1 1 0 1 1 1 0 PapG chaperone-binding domain TAXi_C PF14541.6 ORF104863 - 1.9e-06 27.7 0.0 2.4e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF104863 - 0.0049 16.3 0.1 0.0054 16.2 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease VASt PF16016.5 ORF104863 - 0.052 13.9 0.0 0.058 13.8 0.0 1.1 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain DUF2238 PF09997.9 ORF104725 - 2.6e-22 79.1 2.5 3.5e-22 78.7 2.5 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2238) PIG-Y PF15159.6 ORF104725 - 0.06 14.3 0.5 0.074 14.0 0.5 1.1 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF4538 PF15061.6 ORF104725 - 0.59 9.9 2.2 0.65 9.8 0.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF2370 PF10176.9 ORF104606 - 0.025 14.2 1.3 0.027 14.1 0.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) GP3 PF03076.14 ORF104544 - 0.029 14.4 0.0 0.03 14.4 0.0 1.1 1 0 0 1 1 1 0 Equine arteritis virus GP3 Rsa3 PF14615.6 ORF104544 - 0.17 11.5 0.1 2.9 7.5 0.0 2.1 1 1 1 2 2 2 0 Ribosome-assembly protein 3 2OG-FeII_Oxy_4 PF13661.6 ORF104236 - 2.4e-14 53.8 0.0 2.9e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_3 PF13640.6 ORF104236 - 8.1e-13 49.1 0.0 9.6e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF2070 PF09843.9 ORF10412 - 6.1 5.0 10.7 6.6 4.9 10.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Aldo_ket_red PF00248.21 ORF104041 - 1.1e-06 28.0 0.0 1.3e-06 27.9 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Lebercilin PF15619.6 ORF103655 - 7.6e-08 32.2 19.5 8.2e-08 32.1 19.5 1.0 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease PAS_10 PF13596.6 ORF103655 - 0.095 13.3 0.4 0.11 13.1 0.4 1.1 1 0 0 1 1 1 0 PAS domain Adeno_PV PF03910.13 ORF103655 - 0.12 11.0 1.6 0.13 11.0 1.6 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV Allexi_40kDa PF05549.11 ORF103655 - 0.48 9.9 3.8 0.48 9.9 3.8 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein Atg14 PF10186.9 ORF103655 - 0.8 8.7 9.6 0.82 8.7 9.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3450 PF11932.8 ORF103655 - 5.3 6.3 12.8 11 5.3 12.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Get5_C PF18514.1 ORF103395 - 0.19 11.4 0.3 7.6 6.3 0.2 2.3 2 0 0 2 2 2 0 Get5 C-terminal domain TspO_MBR PF03073.15 ORF102731 - 0.021 14.8 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family EF-hand_7 PF13499.6 ORF102030 - 8.7e-16 58.1 5.0 2.6e-10 40.6 2.5 1.7 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF102030 - 9.2e-13 46.8 4.1 4.3e-06 25.9 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF102030 - 5.5e-11 41.5 3.2 0.00013 21.6 1.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF102030 - 1.5e-08 34.4 2.4 2.2e-05 24.2 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF102030 - 1.5e-06 27.4 2.1 0.018 14.5 1.6 2.3 2 0 0 2 2 2 2 EF hand EF-hand_10 PF14788.6 ORF102030 - 0.0012 18.6 0.6 0.0085 15.9 0.0 2.3 2 1 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF102030 - 0.0019 18.1 2.4 0.02 14.9 0.1 2.0 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand Ribosomal_L13 PF00572.18 ORF101622 - 0.14 12.5 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L13 Com_YlbF PF06133.11 ORF101374 - 0.0038 17.8 1.4 0.0053 17.4 1.4 1.3 1 0 0 1 1 1 1 Control of competence regulator ComK, YlbF/YmcA bZIP_1 PF00170.21 ORF100579 - 4.9e-08 32.9 10.7 4.9e-08 32.9 10.7 2.1 1 1 1 2 2 2 1 bZIP transcription factor bZIP_2 PF07716.15 ORF100579 - 3.6e-05 23.8 11.3 3.6e-05 23.8 11.3 2.2 2 0 0 2 2 2 1 Basic region leucine zipper TSC22 PF01166.18 ORF100579 - 0.024 15.0 1.0 0.024 15.0 1.0 1.6 2 0 0 2 2 2 0 TSC-22/dip/bun family TrbI_Ftype PF09677.10 ORF100579 - 0.078 13.3 0.8 0.098 13.0 0.8 1.2 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) GvpL_GvpF PF06386.11 ORF100579 - 1.5 8.7 9.0 1.6 8.6 9.0 1.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF FapA PF03961.13 ORF100579 - 1.7 7.1 15.5 2.1 6.9 15.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4094 PF13334.6 ORF100579 - 2 8.9 6.5 2.8 8.4 6.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) Med19 PF10278.9 ORF100579 - 2.1 8.2 22.2 2.4 8.1 22.2 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Vfa1 PF08432.10 ORF100579 - 5.4 7.3 20.3 6.1 7.1 20.3 1.0 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF4407 PF14362.6 ORF100579 - 8.3 5.7 7.8 9.5 5.5 7.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Mit_KHE1 PF10173.9 ORF100579 - 8.7 6.4 8.0 9.8 6.2 8.0 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related DUF3148 PF11347.8 ORF100249 - 0.066 13.0 0.7 0.11 12.2 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3148) DUF4296 PF14129.6 ORF100162 - 0.0072 16.9 0.2 0.01 16.4 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4296) RNA_pol_Rpb1_R PF05001.13 NODE_63870_length_253_cov_1.059633_g55929_i0reverse_frame_1 - 0.032 14.6 4.4 1.8 9.0 0.5 2.7 2 0 0 2 2 2 0 RNA polymerase Rpb1 C-terminal repeat DUF823 PF05689.11 NODE_63869_length_253_cov_1.082569_g55928_i0forward_frame_1 - 0.015 15.1 0.1 0.017 14.9 0.1 1.0 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF823) Inhibitor_I67 PF11405.8 NODE_63865_length_253_cov_1.096330_g55924_i0reverse_frame_1 - 0.1 12.9 1.4 0.48 10.7 0.7 2.0 2 0 0 2 2 2 0 Bromelain inhibitor VI Peptidase_S74 PF13884.6 NODE_63857_length_253_cov_1.266055_g55916_i0forward_frame_1 - 0.25 11.7 1.5 0.4 11.0 1.5 1.3 1 0 0 1 1 1 0 Chaperone of endosialidase Osw5 PF17062.5 NODE_63851_length_253_cov_1.399083_g55910_i0forward_frame_1 - 1.6 8.9 9.9 0.054 13.6 3.1 2.0 2 1 0 2 2 2 0 Outer spore wall 5 Baculo_LEF5_C PF11792.8 NODE_63848_length_253_cov_1.431193_g55907_i0forward_frame_1 - 0.13 12.0 2.3 0.46 10.2 0.0 2.4 3 0 0 3 3 3 0 Baculoviridae late expression factor 5 C-terminal domain MatE PF01554.18 NODE_63847_length_253_cov_1.431193_g55906_i0reverse_frame_1 - 5.1e-06 26.2 2.7 5.8e-06 26.1 2.7 1.0 1 0 0 1 1 1 1 MatE DUF3332 PF11810.8 NODE_63845_length_253_cov_1.458716_g55904_i0reverse_frame_1 - 0.064 12.9 0.0 0.067 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DUF5480 PF17576.2 NODE_63844_length_253_cov_1.463303_g55903_i0reverse_frame_1 - 0.023 14.7 0.1 0.023 14.7 0.1 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5480) RNase_H PF00075.24 NODE_63834_length_253_cov_1.591743_g55893_i0reverse_frame_1 - 0.00054 20.2 0.1 0.00065 19.9 0.1 1.1 1 0 0 1 1 1 1 RNase H DUF3179 PF11376.8 NODE_63834_length_253_cov_1.591743_g55893_i0reverse_frame_1 - 0.0072 15.7 0.0 0.0091 15.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3179) WSC PF01822.19 NODE_63827_length_253_cov_1.688073_g55886_i0reverse_frame_1 - 0.012 15.8 1.9 0.015 15.5 1.9 1.1 1 0 0 1 1 1 0 WSC domain ABC_trans_CmpB PF06541.11 NODE_63827_length_253_cov_1.688073_g55886_i0forward_frame_1 - 0.029 14.6 2.3 0.033 14.4 2.3 1.1 1 0 0 1 1 1 0 Putative ABC-transporter type IV RPAP1_C PF08620.10 NODE_63824_length_253_cov_1.738532_g55883_i0reverse_frame_1 - 0.012 15.7 0.8 0.017 15.2 0.5 1.4 1 1 0 1 1 1 0 RPAP1-like, C-terminal Crust_neurohorm PF01147.17 NODE_63822_length_253_cov_1.788991_g55881_i0reverse_frame_1 - 0.035 13.9 0.6 0.039 13.8 0.6 1.2 1 0 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family Lamprin PF06403.11 NODE_63814_length_253_cov_1.935780_g55873_i0reverse_frame_1 - 0.33 10.9 12.7 1.6 8.6 12.7 1.9 1 1 0 1 1 1 0 Lamprin FAP PF07174.11 NODE_63814_length_253_cov_1.935780_g55873_i0forward_frame_1 - 0.19 11.2 6.7 0.21 11.0 6.7 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Kelch_1 PF01344.25 NODE_63812_length_253_cov_1.986239_g55871_i0forward_frame_1 - 0.017 14.7 1.3 0.025 14.2 1.3 1.2 1 0 0 1 1 1 0 Kelch motif Kelch_4 PF13418.6 NODE_63812_length_253_cov_1.986239_g55871_i0forward_frame_1 - 0.034 14.1 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_63812_length_253_cov_1.986239_g55871_i0forward_frame_1 - 0.049 13.6 0.8 0.097 12.7 0.7 1.6 1 1 0 1 1 1 0 Kelch motif Fimbrial PF00419.20 NODE_63804_length_253_cov_2.128440_g55863_i0forward_frame_1 - 1.6e-07 31.7 0.1 1.8e-07 31.5 0.1 1.0 1 0 0 1 1 1 1 Fimbrial protein MFS_1 PF07690.16 NODE_63799_length_253_cov_2.252294_g55858_i0reverse_frame_1 - 0.0077 15.2 3.7 0.009 15.0 3.7 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily L27_N PF09060.10 NODE_63797_length_253_cov_2.325688_g55856_i0reverse_frame_1 - 0.029 14.4 0.0 0.049 13.7 0.0 1.4 1 0 0 1 1 1 0 L27_N CytB6-F_Fe-S PF08802.10 NODE_63790_length_253_cov_2.458716_g55849_i0reverse_frame_1 - 0.025 14.6 0.8 3.6 7.7 0.0 2.5 1 1 1 2 2 2 0 Cytochrome B6-F complex Fe-S subunit STI1 PF17830.1 NODE_63789_length_253_cov_2.573394_g55848_i0reverse_frame_1 - 0.016 15.1 0.7 0.03 14.3 0.7 1.4 1 0 0 1 1 1 0 STI1 domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks281.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks281.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks281.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks281.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3709 PF12493.8 NODE_63777_length_253_cov_3.050459_g55836_i0reverse_frame_1 - 0.025 14.6 0.2 0.046 13.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3709) WD40 PF00400.32 NODE_63773_length_253_cov_3.633028_g55832_i0forward_frame_1 - 3e-13 50.0 5.0 5.7e-08 33.3 0.7 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF3261 PF11659.8 NODE_63773_length_253_cov_3.633028_g55832_i0forward_frame_1 - 0.017 15.0 0.0 0.12 12.2 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3261) ANAPC4_WD40 PF12894.7 NODE_63773_length_253_cov_3.633028_g55832_i0forward_frame_1 - 0.022 15.1 0.4 0.28 11.5 0.3 1.9 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Ac81 PF05820.11 NODE_63769_length_253_cov_4.500000_g55828_i0reverse_frame_1 - 0.39 10.2 2.2 0.47 10.0 2.2 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 MORN PF02493.20 NODE_63763_length_253_cov_30.220183_g55822_i0reverse_frame_1 - 0.0067 16.3 1.3 0.026 14.4 0.3 2.1 2 0 0 2 2 2 1 MORN repeat TSGP1 PF07771.11 NODE_63756_length_253_cov_40.348624_g55815_i0reverse_frame_1 - 0.028 14.6 2.2 0.034 14.3 2.2 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 DUF743 PF05332.11 NODE_63754_length_253_cov_43.371560_g55813_i0forward_frame_1 - 0.16 12.0 0.3 12 6.0 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF743) DUF4094 PF13334.6 NODE_63751_length_253_cov_48.935780_g55810_i0forward_frame_1 - 0.1 13.1 0.3 0.13 12.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) MCM_bind PF09739.9 NODE_63750_length_253_cov_50.417431_g55809_i0forward_frame_1 - 0.00022 19.8 0.0 0.00026 19.6 0.0 1.0 1 0 0 1 1 1 1 Mini-chromosome maintenance replisome factor DUF3079 PF11278.8 NODE_63747_length_253_cov_63.334862_g55806_i0reverse_frame_1 - 0.11 12.3 0.1 0.23 11.3 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3079) DUF4549 PF15082.6 NODE_63744_length_253_cov_67.000000_g55803_i0reverse_frame_1 - 0.0077 16.0 0.0 0.0085 15.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4549) DUF2633 PF11119.8 NODE_63737_length_253_cov_99.610092_g55796_i0reverse_frame_1 - 0.06 13.2 0.4 0.091 12.7 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) RSS_P20 PF11757.8 NODE_63735_length_253_cov_101.481651_g55794_i0forward_frame_1 - 0.067 13.6 0.0 0.08 13.4 0.0 1.1 1 0 0 1 1 1 0 Suppressor of RNA silencing P21-like N-terminal domain Neuralized PF07177.12 NODE_63725_length_253_cov_174.032110_g55784_i0forward_frame_1 - 7.7e-06 26.0 0.0 8.5e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Neuralized DUF3819 PF12842.7 NODE_63724_length_253_cov_178.862385_g55783_i0reverse_frame_1 - 0.13 12.2 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3819) BatD PF13584.6 NODE_63719_length_253_cov_612.311927_g55778_i0reverse_frame_1 - 0.16 10.8 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Oxygen tolerance BatD PF13584.6 NODE_63718_length_253_cov_664.004587_g55777_i0forward_frame_1 - 0.14 10.9 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Oxygen tolerance hemP PF10636.9 NODE_63714_length_254_cov_0.913242_g55773_i0reverse_frame_1 - 0.13 12.0 4.0 0.22 11.3 4.0 1.3 1 0 0 1 1 1 0 Hemin uptake protein hemP Metallophos PF00149.28 NODE_63712_length_254_cov_0.990868_g55771_i0forward_frame_1 - 8.5e-09 36.2 0.0 8.8e-09 36.2 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase TMEM138 PF14935.6 NODE_63706_length_254_cov_1.095890_g55765_i0reverse_frame_1 - 0.081 13.6 0.1 0.088 13.5 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 138 LRR_4 PF12799.7 NODE_63706_length_254_cov_1.095890_g55765_i0forward_frame_1 - 0.075 13.5 6.2 1 9.9 3.1 2.2 2 1 0 2 2 2 0 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_63706_length_254_cov_1.095890_g55765_i0forward_frame_1 - 0.1 13.2 4.6 2.8 8.8 0.8 2.5 2 1 0 2 2 2 0 Leucine Rich Repeat LRR_8 PF13855.6 NODE_63706_length_254_cov_1.095890_g55765_i0forward_frame_1 - 0.37 10.6 5.2 11 5.8 2.5 2.6 2 1 0 2 2 2 0 Leucine rich repeat Spt46 PF17734.1 NODE_63702_length_254_cov_1.155251_g55761_i0forward_frame_1 - 0.097 12.5 0.1 0.099 12.4 0.1 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 vMSA PF00695.19 NODE_63701_length_254_cov_1.200913_g55760_i0reverse_frame_1 - 0.14 11.2 0.4 0.16 11.0 0.4 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF3761 PF12587.8 NODE_63689_length_254_cov_1.333333_g55748_i0forward_frame_1 - 0.55 10.7 2.6 0.94 10.0 2.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3761) G_path_suppress PF15991.5 NODE_63680_length_254_cov_1.433790_g55739_i0reverse_frame_1 - 0.038 14.1 0.0 0.041 14.0 0.0 1.0 1 0 0 1 1 1 0 G-protein pathway suppressor Methyltransf_30 PF05430.11 NODE_63670_length_254_cov_1.529680_g55729_i0reverse_frame_1 - 1.4e-27 96.0 0.1 1.6e-27 95.9 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase DUF2973 PF11189.8 NODE_63664_length_254_cov_1.625571_g55723_i0forward_frame_1 - 0.44 10.7 1.7 0.4 10.8 0.7 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2973) Neural_ProG_Cyt PF06567.11 NODE_63654_length_254_cov_1.817352_g55713_i0reverse_frame_1 - 0.024 14.9 0.2 0.03 14.6 0.2 1.2 1 0 0 1 1 1 0 Neural chondroitin sulphate proteoglycan cytoplasmic domain Geminin PF07412.12 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 4.6e-06 26.5 4.5 6e-06 26.1 4.5 1.1 1 0 0 1 1 1 1 Geminin DUF2046 PF09755.9 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.0015 17.8 0.8 0.0016 17.7 0.8 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) UPF0242 PF06785.11 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.0016 18.6 1.5 0.0017 18.5 1.5 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF4164 PF13747.6 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.0059 16.9 2.9 0.0081 16.4 2.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4164) KASH_CCD PF14662.6 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.01 15.7 4.2 0.013 15.3 4.2 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DivIC PF04977.15 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.02 14.7 2.0 0.031 14.1 2.0 1.3 1 0 0 1 1 1 0 Septum formation initiator Csm1_N PF18504.1 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.02 15.2 4.1 0.032 14.6 4.1 1.3 1 0 0 1 1 1 0 Csm1 N-terminal domain bZIP_1 PF00170.21 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.028 14.5 3.1 0.028 14.5 3.1 1.7 2 1 0 2 2 2 0 bZIP transcription factor ZapB PF06005.12 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.068 13.6 6.8 0.11 13.0 6.8 1.3 1 0 0 1 1 1 0 Cell division protein ZapB GIT_CC PF16559.5 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.08 12.8 4.8 0.11 12.4 4.8 1.2 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor Cep57_CLD_2 PF14197.6 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.65 10.1 9.0 2.2 8.4 9.0 1.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 Baculo_ODV-E27 PF05314.11 NODE_63651_length_254_cov_1.853881_g55710_i0reverse_frame_1 - 0.019 14.2 0.5 0.02 14.1 0.5 1.0 1 0 0 1 1 1 0 Baculovirus occlusion-derived virus envelope protein EC27 FliD_N PF02465.18 NODE_63645_length_254_cov_1.926941_g55704_i0reverse_frame_1 - 0.039 14.7 7.7 0.049 14.3 7.7 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus Microtub_bind PF13931.6 NODE_63645_length_254_cov_1.926941_g55704_i0reverse_frame_1 - 0.22 11.9 7.9 0.32 11.4 7.9 1.4 1 1 0 1 1 1 0 Kinesin-associated microtubule-binding Flavi_M PF01004.19 NODE_63643_length_254_cov_1.995434_g55702_i0reverse_frame_1 - 0.13 12.0 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 Flavivirus envelope glycoprotein M RPEL PF02755.15 NODE_63643_length_254_cov_1.995434_g55702_i0forward_frame_1 - 0.096 12.4 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 RPEL repeat FeS PF04060.13 NODE_63642_length_254_cov_2.004566_g55701_i0reverse_frame_1 - 0.038 13.6 1.0 0.038 13.6 1.0 3.2 3 0 0 3 3 3 0 Putative Fe-S cluster DUF1929 PF09118.11 NODE_63633_length_254_cov_2.283105_g55692_i0forward_frame_1 - 0.013 15.8 0.1 0.018 15.3 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1929) RBD PF02196.15 NODE_63633_length_254_cov_2.283105_g55692_i0forward_frame_1 - 0.087 12.9 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Raf-like Ras-binding domain adh_short_C2 PF13561.6 NODE_63624_length_254_cov_2.817352_g55683_i0forward_frame_1 - 4.6e-16 59.1 0.0 5e-16 59.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 NODE_63624_length_254_cov_2.817352_g55683_i0forward_frame_1 - 1.2e-10 41.2 0.0 1.4e-10 40.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase NLRC4_HD2 PF17776.1 NODE_63622_length_254_cov_3.045662_g55681_i0forward_frame_1 - 0.14 12.7 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 NLRC4 helical domain HD2 DUF1072 PF06380.11 NODE_63616_length_254_cov_3.611872_g55675_i0forward_frame_1 - 0.012 15.5 4.4 0.017 14.9 4.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) Imm41 PF15592.6 NODE_63615_length_254_cov_3.721461_g55674_i0reverse_frame_1 - 0.07 13.5 0.3 0.12 12.7 0.1 1.5 2 0 0 2 2 2 0 Immunity protein 41 DUF5129 PF17173.4 NODE_63608_length_254_cov_10.926941_g55667_i0reverse_frame_1 - 0.18 10.9 0.6 0.2 10.7 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) FXR_C1 PF16096.5 NODE_63608_length_254_cov_10.926941_g55667_i0forward_frame_1 - 1.5 9.1 7.0 2.1 8.6 7.0 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 DUF3432 PF11914.8 NODE_63601_length_254_cov_38.840183_g55660_i0forward_frame_1 - 0.036 14.3 0.5 0.046 14.0 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) VitD-bind_III PF09164.10 NODE_63601_length_254_cov_38.840183_g55660_i0forward_frame_1 - 0.063 13.3 0.1 0.085 12.9 0.1 1.2 1 0 0 1 1 1 0 Vitamin D binding protein, domain III 2OG-FeII_Oxy_5 PF13759.6 NODE_63598_length_254_cov_47.570776_g55657_i0reverse_frame_1 - 6.7e-09 36.1 0.0 7.2e-09 36.0 0.0 1.2 1 0 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy_3 PF13640.6 NODE_63598_length_254_cov_47.570776_g55657_i0reverse_frame_1 - 0.00056 20.8 0.0 0.00058 20.7 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily HeLo PF14479.6 NODE_63593_length_254_cov_51.406393_g55652_i0forward_frame_1 - 0.033 14.0 0.2 0.034 14.0 0.2 1.0 1 0 0 1 1 1 0 Prion-inhibition and propagation Cadherin_tail PF15974.5 NODE_63576_length_254_cov_65.570776_g55635_i0reverse_frame_1 - 0.0091 16.3 0.7 0.0091 16.3 0.7 1.1 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region She9_MDM33 PF05546.11 NODE_63574_length_254_cov_67.794521_g55633_i0reverse_frame_1 - 0.0034 17.2 0.7 0.0034 17.2 0.7 1.3 1 1 0 1 1 1 1 She9 / Mdm33 family DUF3291 PF11695.8 NODE_63574_length_254_cov_67.794521_g55633_i0reverse_frame_1 - 0.026 14.2 0.1 0.037 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3291) TMEM174 PF15029.6 NODE_63567_length_254_cov_89.337900_g55626_i0forward_frame_1 - 0.22 11.2 0.4 0.24 11.1 0.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 174 HIP1_clath_bdg PF16515.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 3.8e-06 27.4 6.7 4e-06 27.4 6.7 1.1 1 0 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 IFT57 PF10498.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.0017 17.4 7.2 0.0021 17.1 7.2 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Seryl_tRNA_N PF02403.22 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.0023 18.2 9.8 0.0029 17.8 9.8 1.2 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF1640 PF07798.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.006 16.7 7.3 0.0067 16.5 7.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) RPW8 PF05659.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.0084 15.8 6.7 0.017 14.8 6.7 1.5 1 1 0 1 1 1 1 Arabidopsis broad-spectrum mildew resistance protein RPW8 GlutR_dimer PF00745.20 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.012 16.1 3.6 0.014 15.9 3.6 1.1 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain bZIP_1 PF00170.21 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.013 15.5 14.8 0.021 14.9 2.3 2.2 1 1 1 2 2 2 0 bZIP transcription factor DUF241 PF03087.14 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.015 15.1 3.9 0.017 14.9 3.9 1.0 1 0 0 1 1 1 0 Arabidopsis protein of unknown function Val_tRNA-synt_C PF10458.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.02 15.2 2.5 0.02 15.2 2.5 2.3 2 0 0 2 2 2 0 Valyl tRNA synthetase tRNA binding arm Cluap1 PF10234.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.022 14.1 6.5 0.026 14.0 6.5 1.1 1 0 0 1 1 1 0 Clusterin-associated protein-1 SseC PF04888.12 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.033 13.8 2.4 0.042 13.4 2.4 1.3 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family SlyX PF04102.12 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.036 14.7 6.1 0.32 11.6 5.0 2.1 1 1 1 2 2 2 0 SlyX Phage_GPO PF05929.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.052 13.2 3.0 0.06 13.0 3.0 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Atg14 PF10186.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.065 12.3 7.0 0.075 12.1 7.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 KxDL PF10241.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.067 13.5 5.7 0.094 13.0 5.7 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein Exonuc_VII_L PF02601.15 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.071 12.7 2.6 0.079 12.5 2.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit K-box PF01486.17 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.073 13.3 9.4 0.1 12.8 8.5 1.7 1 1 1 2 2 2 0 K-box region BLOC1_2 PF10046.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.09 13.1 11.7 0.54 10.6 2.2 2.0 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ABC_tran_CTD PF16326.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.13 12.5 8.1 0.41 10.9 8.1 1.8 1 1 0 1 1 1 0 ABC transporter C-terminal domain DUF948 PF06103.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.14 12.4 4.0 0.21 11.8 3.9 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) bZIP_2 PF07716.15 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.17 12.0 10.7 0.13 12.4 2.9 2.2 2 0 0 2 2 2 0 Basic region leucine zipper DUF4407 PF14362.6 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.2 11.0 3.0 0.22 10.8 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Allexi_40kDa PF05549.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.2 11.1 3.8 0.22 11.0 3.8 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein Fzo_mitofusin PF04799.13 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.32 10.5 4.3 0.39 10.2 4.3 1.2 1 0 0 1 1 1 0 fzo-like conserved region DUF4298 PF14131.6 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.39 10.7 6.5 4.2 7.4 0.9 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4298) DUF641 PF04859.12 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.42 10.9 8.7 1.3 9.3 7.4 1.8 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF4446 PF14584.6 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.47 10.4 5.3 0.73 9.8 5.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) TMPIT PF07851.13 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.49 9.6 4.7 0.51 9.5 4.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein YtxH PF12732.7 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.5 10.9 5.6 1 9.9 5.6 1.6 1 1 0 1 1 1 0 YtxH-like protein CLP_protease PF00574.23 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.79 9.6 3.7 7 6.5 0.6 2.0 1 1 1 2 2 2 0 Clp protease DUF4795 PF16043.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.84 9.2 13.0 1.2 8.7 5.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) VGPC1_C PF16799.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.94 9.5 13.1 1.8 8.6 2.1 2.5 2 1 0 2 2 2 0 C-terminal membrane-localisation domain of ion-channel, VCN1 DUF1664 PF07889.12 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.96 9.5 5.8 1.7 8.7 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4337 PF14235.6 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 1.2 9.2 5.6 1.4 9.0 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) V_ATPase_I PF01496.19 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 2.1 6.2 6.2 2.5 5.9 6.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4806 PF16064.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 4.1 7.8 7.3 5.5 7.4 1.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4806) DivIC PF04977.15 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 4.2 7.2 12.6 5.2 6.9 2.9 2.1 1 1 1 2 2 2 0 Septum formation initiator eIF-4B PF06273.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 4.3 6.3 8.4 4.4 6.2 8.4 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B MerR PF00376.23 NODE_63555_length_254_cov_143.780822_g55614_i0reverse_frame_1 - 0.15 11.9 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 MerR family regulatory protein DUF4611 PF15387.6 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 1.4 9.2 16.0 0.09 13.0 11.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4611) CENP-B_dimeris PF09026.10 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 1.6 9.2 16.5 2.4 8.6 16.5 1.3 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DNA_pol_phi PF04931.13 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 2.3 6.2 12.4 2.1 6.4 12.4 1.1 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 2.7 6.1 14.2 3.1 5.9 14.2 1.0 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 3 6.0 13.4 3.5 5.8 13.4 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4637 PF15470.6 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 9.3 6.0 10.1 11 5.7 10.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) PTPRCAP PF15713.5 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 9.8 6.4 15.1 11 6.3 15.1 1.0 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated API5 PF05918.11 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 9.9 4.8 7.4 11 4.7 7.4 1.0 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) Dsh_C PF12316.8 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_1 - 0.15 12.5 15.3 0.18 12.2 15.3 1.0 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Herpes_capsid PF06112.11 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_1 - 0.92 9.5 11.8 1.1 9.3 11.8 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Bac_surface_Ag PF01103.23 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_1 - 4.8 6.6 8.8 9 5.7 1.9 2.0 1 1 1 2 2 2 0 Surface antigen DUF1844 PF08899.11 NODE_63552_length_254_cov_194.397260_g55611_i0reverse_frame_1 - 0.035 14.4 0.0 0.047 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1844) Pkinase PF00069.25 NODE_63538_length_254_cov_5334.127854_g55597_i0reverse_frame_1 - 7.5e-15 55.0 0.0 8.3e-15 54.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_63538_length_254_cov_5334.127854_g55597_i0reverse_frame_1 - 9.8e-11 41.4 0.0 1.1e-10 41.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase GTP_EFTU PF00009.27 NODE_63532_length_255_cov_0.909091_g55591_i0forward_frame_1 - 0.001 18.6 0.1 0.0012 18.4 0.1 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain CRF1 PF10380.9 NODE_63528_length_255_cov_1.050000_g55587_i0forward_frame_1 - 0.044 14.1 0.7 0.052 13.9 0.7 1.1 1 0 0 1 1 1 0 Transcription factor CRF1 MOZART2 PF12926.7 NODE_63527_length_255_cov_1.072727_g55586_i0forward_frame_1 - 0.0057 16.2 0.0 0.0072 15.9 0.0 1.2 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated Arm PF00514.23 NODE_63527_length_255_cov_1.072727_g55586_i0forward_frame_1 - 0.09 12.8 1.2 5.4 7.2 0.2 2.4 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat HMG_CoA_synt_C PF08540.10 NODE_63523_length_255_cov_1.136364_g55582_i0reverse_frame_1 - 0.12 11.9 0.0 0.15 11.6 0.0 1.0 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A synthase C terminal Gon7 PF08738.10 NODE_63501_length_255_cov_1.450000_g55560_i0reverse_frame_1 - 0.17 12.0 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Gon7 family ArsA_ATPase PF02374.15 NODE_63493_length_255_cov_1.495455_g55552_i0reverse_frame_1 - 0.042 13.0 0.0 0.046 12.9 0.0 1.1 1 0 0 1 1 1 0 Anion-transporting ATPase DUF2458 PF10454.9 NODE_63493_length_255_cov_1.495455_g55552_i0reverse_frame_1 - 0.07 12.8 0.1 0.076 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2458) Chitin_synth_1 PF01644.17 NODE_63492_length_255_cov_1.531818_g55551_i0reverse_frame_1 - 1.1e-10 41.7 0.0 1.1e-10 41.7 0.0 1.1 1 0 0 1 1 1 1 Chitin synthase Spin-Ssty PF02513.17 NODE_63483_length_255_cov_1.672727_g55542_i0forward_frame_1 - 0.14 11.9 1.9 7.9 6.3 0.6 2.2 1 1 1 2 2 2 0 Spin/Ssty Family Endonuclease_7 PF02945.15 NODE_63481_length_255_cov_1.690909_g55540_i0reverse_frame_1 - 0.0021 17.9 2.2 0.0025 17.7 2.2 1.2 1 0 0 1 1 1 1 Recombination endonuclease VII EutH PF04346.12 NODE_63472_length_255_cov_1.813636_g55531_i0forward_frame_1 - 0.075 12.2 4.1 0.077 12.2 4.1 1.0 1 0 0 1 1 1 0 Ethanolamine utilisation protein, EutH WD40 PF00400.32 NODE_63469_length_255_cov_1.822727_g55528_i0reverse_frame_1 - 5.1e-09 36.6 0.1 0.00069 20.4 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat WD40_like PF17005.5 NODE_63469_length_255_cov_1.822727_g55528_i0reverse_frame_1 - 0.0019 17.6 0.1 0.0021 17.4 0.1 1.0 1 0 0 1 1 1 1 WD40-like domain SecA_PP_bind PF01043.20 NODE_63458_length_255_cov_2.000000_g55517_i0forward_frame_1 - 4.8e-25 88.4 0.0 6.3e-25 88.0 0.0 1.2 1 0 0 1 1 1 1 SecA preprotein cross-linking domain SecA_DEAD PF07517.14 NODE_63458_length_255_cov_2.000000_g55517_i0forward_frame_1 - 8.8e-09 35.1 0.5 1.4e-08 34.4 0.5 1.4 1 1 0 1 1 1 1 SecA DEAD-like domain Peptidase_M56 PF05569.11 NODE_63446_length_255_cov_2.372727_g55505_i0reverse_frame_1 - 0.25 10.5 2.8 0.31 10.2 2.8 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 DUF902 PF06001.13 NODE_63438_length_255_cov_2.481818_g55497_i0forward_frame_1 - 0.015 15.8 1.0 0.037 14.5 0.5 1.9 1 1 1 2 2 2 0 Domain of Unknown Function (DUF902) Keratin_B2 PF01500.17 NODE_63436_length_255_cov_2.495455_g55495_i0reverse_frame_1 - 0.021 14.8 7.6 0.045 13.7 7.6 1.6 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Keratin_B2_2 PF13885.6 NODE_63436_length_255_cov_2.495455_g55495_i0reverse_frame_1 - 0.036 14.0 9.6 0.29 11.1 9.6 2.1 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Extensin_2 PF04554.13 NODE_63436_length_255_cov_2.495455_g55495_i0reverse_frame_1 - 2 8.5 29.0 1 9.5 17.4 2.1 1 1 1 2 2 2 0 Extensin-like region ARL2_Bind_BART PF11527.8 NODE_63431_length_255_cov_2.950000_g55490_i0reverse_frame_1 - 0.0032 17.6 0.1 0.0049 17.0 0.1 1.3 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART PsbM PF05151.12 NODE_63431_length_255_cov_2.950000_g55490_i0forward_frame_1 - 0.054 13.3 4.3 0.12 12.2 4.3 1.6 1 0 0 1 1 1 0 Photosystem II reaction centre M protein (PsbM) AA_permease_2 PF13520.6 NODE_63428_length_255_cov_3.172727_g55487_i0reverse_frame_1 - 0.093 11.5 5.9 0.11 11.3 5.9 1.0 1 0 0 1 1 1 0 Amino acid permease Tlr3_TMD PF17968.1 NODE_63428_length_255_cov_3.172727_g55487_i0reverse_frame_1 - 5.4 7.3 10.4 1.1 9.5 1.5 2.8 3 0 0 3 3 3 0 Toll-like receptor 3 trans-membrane domain YWFCY PF14293.6 NODE_63418_length_255_cov_3.904545_g55477_i0reverse_frame_1 - 0.13 12.6 0.7 0.23 11.8 0.3 1.7 1 1 0 1 1 1 0 YWFCY protein UPF0182 PF03699.13 NODE_63414_length_255_cov_11.045455_g55473_i0forward_frame_1 - 1.1 7.3 4.9 1.1 7.3 4.9 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) DUF2840 PF11000.8 NODE_63402_length_255_cov_51.763636_g55461_i0forward_frame_1 - 0.014 15.2 0.0 0.017 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2840) CENP-B_dimeris PF09026.10 NODE_63398_length_255_cov_57.618182_g55457_i0reverse_frame_1 - 0.04 14.3 0.2 0.047 14.1 0.2 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DUF3381 PF11861.8 NODE_63398_length_255_cov_57.618182_g55457_i0reverse_frame_1 - 0.27 11.0 15.2 0.29 10.9 15.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) FAM176 PF14851.6 NODE_63398_length_255_cov_57.618182_g55457_i0reverse_frame_1 - 0.74 9.5 4.7 0.8 9.4 4.7 1.1 1 0 0 1 1 1 0 FAM176 family PRA1 PF03208.19 NODE_63398_length_255_cov_57.618182_g55457_i0forward_frame_1 - 0.13 11.9 9.0 0.15 11.7 9.0 1.1 1 0 0 1 1 1 0 PRA1 family protein PNTB_4TM PF12769.7 NODE_63394_length_255_cov_68.227273_g55453_i0forward_frame_1 - 0.03 14.8 0.2 0.035 14.6 0.2 1.2 1 0 0 1 1 1 0 4TM region of pyridine nucleotide transhydrogenase, mitoch Mon2_C PF16206.5 NODE_63388_length_255_cov_91.009091_g55447_i0reverse_frame_1 - 0.042 12.0 0.1 0.044 11.9 0.1 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein RRM_1 PF00076.22 NODE_63387_length_255_cov_97.395455_g55446_i0forward_frame_1 - 8.4e-06 25.5 0.0 1.4e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PsbN PF02468.15 NODE_63387_length_255_cov_97.395455_g55446_i0forward_frame_1 - 0.12 12.3 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre N protein (psbN) PsbY PF06298.11 NODE_63380_length_255_cov_127.318182_g55439_i0reverse_frame_1 - 0.032 14.1 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 Photosystem II protein Y (PsbY) Diphthami_syn_2 PF01902.17 NODE_63376_length_255_cov_139.618182_g55435_i0forward_frame_1 - 0.028 13.9 0.0 0.032 13.7 0.0 1.1 1 0 0 1 1 1 0 Diphthamide synthase PsbI PF02532.14 NODE_63376_length_255_cov_139.618182_g55435_i0forward_frame_1 - 0.14 12.1 1.1 0.21 11.6 1.1 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) DDOST_48kD PF03345.14 NODE_63374_length_255_cov_150.450000_g55433_i0forward_frame_1 - 5.2e-09 35.4 0.1 5.2e-09 35.4 0.1 1.3 2 0 0 2 2 2 1 Oligosaccharyltransferase 48 kDa subunit beta PhetRS_B1 PF18262.1 NODE_63372_length_255_cov_172.918182_g55431_i0reverse_frame_1 - 3.2e-10 40.1 1.8 4.5e-10 39.6 1.8 1.3 1 0 0 1 1 1 1 Phe-tRNA synthetase beta subunit B1 domain rve PF00665.26 NODE_63372_length_255_cov_172.918182_g55431_i0reverse_frame_1 - 0.14 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain MORN PF02493.20 NODE_63368_length_255_cov_226.936364_g55427_i0reverse_frame_1 - 3.8e-08 32.7 7.8 0.00014 21.6 0.2 3.6 3 1 0 3 3 3 3 MORN repeat DUF5021 PF16424.5 NODE_63364_length_255_cov_343.686364_g55423_i0forward_frame_1 - 0.12 12.2 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5021) Peptidase_M50 PF02163.22 NODE_63362_length_255_cov_548.772727_g55421_i0reverse_frame_1 - 0.084 12.1 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M50 DUF2102 PF09875.9 NODE_63359_length_255_cov_4286.745455_g55418_i0forward_frame_1 - 0.014 15.1 0.0 0.017 14.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) YppG PF14179.6 NODE_63356_length_256_cov_0.959276_g55415_i0forward_frame_2 - 1.1 10.0 5.8 1.5 9.5 5.8 1.3 1 1 0 1 1 1 0 YppG-like protein Pex24p PF06398.11 NODE_63355_length_256_cov_0.995475_g55414_i0forward_frame_2 - 0.76 8.7 3.6 0.25 10.3 1.0 1.4 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin QueF_N PF14819.6 NODE_63353_length_256_cov_1.067873_g55412_i0reverse_frame_3 - 0.046 14.0 0.7 0.068 13.5 0.4 1.4 1 1 0 1 1 1 0 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CxC1 PF18802.1 NODE_63352_length_256_cov_1.072398_g55411_i0forward_frame_2 - 0.098 12.8 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases Epiglycanin_C PF14654.6 NODE_63341_length_256_cov_1.221719_g55400_i0reverse_frame_3 - 0.0012 18.9 0.0 0.0014 18.6 0.0 1.1 1 0 0 1 1 1 1 Mucin, catalytic, TM and cytoplasmic tail region Retrotrans_gag PF03732.17 NODE_63340_length_256_cov_1.235294_g55399_i0reverse_frame_2 - 0.045 14.0 0.1 0.057 13.7 0.1 1.2 1 0 0 1 1 1 0 Retrotransposon gag protein RHH_7 PF16777.5 NODE_63340_length_256_cov_1.235294_g55399_i0reverse_frame_2 - 0.18 12.2 0.3 0.25 11.7 0.3 1.2 1 0 0 1 1 1 0 Transcriptional regulator, RHH-like, CopG Kinesin PF00225.23 NODE_63338_length_256_cov_1.266968_g55397_i0forward_frame_3 - 1.3e-24 86.8 0.7 1.5e-24 86.5 0.7 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_63338_length_256_cov_1.266968_g55397_i0forward_frame_3 - 1.8e-15 57.2 0.2 2e-15 57.0 0.2 1.0 1 0 0 1 1 1 1 Microtubule binding PIF1 PF05970.14 NODE_63338_length_256_cov_1.266968_g55397_i0forward_frame_3 - 0.03 13.5 0.1 0.035 13.3 0.1 1.2 1 0 0 1 1 1 0 PIF1-like helicase EF-hand_12 PF17901.1 NODE_63335_length_256_cov_1.294118_g55394_i0reverse_frame_3 - 0.072 13.6 0.0 0.11 13.0 0.0 1.3 1 0 0 1 1 1 0 EF-hand fold domain zf-CCCH PF00642.24 NODE_63335_length_256_cov_1.294118_g55394_i0reverse_frame_3 - 0.16 11.9 0.3 0.16 11.9 0.3 1.9 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) TF_Otx PF03529.13 NODE_63333_length_256_cov_1.348416_g55392_i0forward_frame_3 - 0.027 14.9 0.3 0.035 14.5 0.3 1.1 1 0 0 1 1 1 0 Otx1 transcription factor Gp37 PF09646.10 NODE_63332_length_256_cov_1.352941_g55391_i0reverse_frame_2 - 0.18 11.6 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 Gp37 protein DUF809 PF05663.11 NODE_63331_length_256_cov_1.352941_g55390_i0reverse_frame_3 - 0.83 9.8 2.7 0.92 9.7 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) cEGF PF12662.7 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.022 14.7 1.3 0.059 13.3 0.3 2.0 1 1 1 2 2 2 0 Complement Clr-like EGF-like FXa_inhibition PF14670.6 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.035 14.4 1.9 4.5 7.6 0.0 2.2 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site DUF4215 PF13948.6 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.071 13.5 0.2 2.7 8.5 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4215) Phage_integrase PF00589.22 NODE_63327_length_256_cov_1.384615_g55386_i0reverse_frame_3 - 0.0038 17.1 0.0 0.0039 17.0 0.0 1.1 1 0 0 1 1 1 1 Phage integrase family Tricho_coat PF05892.11 NODE_63326_length_256_cov_1.384615_g55385_i0forward_frame_3 - 0.013 15.3 0.0 0.015 15.1 0.0 1.0 1 0 0 1 1 1 0 Trichovirus coat protein TubC_N PF18563.1 NODE_63323_length_256_cov_1.434389_g55382_i0forward_frame_2 - 0.022 14.7 0.0 0.028 14.4 0.0 1.2 1 0 0 1 1 1 0 TubC N-terminal docking domain zf-PHD-like PF15446.6 NODE_63322_length_256_cov_1.438914_g55381_i0reverse_frame_3 - 0.038 13.6 0.4 0.046 13.3 0.4 1.1 1 0 0 1 1 1 0 PHD/FYVE-zinc-finger like domain DUF761 PF05553.11 NODE_63321_length_256_cov_1.438914_g55380_i0forward_frame_3 - 0.063 12.8 0.1 0.11 12.0 0.1 1.5 1 0 0 1 1 1 0 Cotton fibre expressed protein MogR_DNAbind PF12181.8 NODE_63321_length_256_cov_1.438914_g55380_i0forward_frame_3 - 0.081 12.8 0.2 0.099 12.6 0.2 1.1 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) DUF1281 PF06924.11 NODE_63311_length_256_cov_1.628959_g55370_i0reverse_frame_2 - 0.19 11.3 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) CBM_14 PF01607.24 NODE_63310_length_256_cov_1.628959_g55369_i0reverse_frame_2 - 0.014 15.6 0.2 0.014 15.6 0.2 2.7 2 1 0 2 2 2 0 Chitin binding Peritrophin-A domain DUF2172 PF09940.9 NODE_63307_length_256_cov_1.678733_g55366_i0forward_frame_3 - 0.1 13.0 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2172) PAS PF00989.25 NODE_63306_length_256_cov_1.710407_g55365_i0forward_frame_2 - 1.1e-07 31.8 0.0 1.2e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 NODE_63306_length_256_cov_1.710407_g55365_i0forward_frame_2 - 2.2e-07 31.1 0.0 2.4e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 PAS domain PAS_8 PF13188.7 NODE_63306_length_256_cov_1.710407_g55365_i0forward_frame_2 - 0.05 13.6 0.0 0.058 13.4 0.0 1.1 1 0 0 1 1 1 0 PAS domain Leader_Trp PF08255.11 NODE_63305_length_256_cov_1.773756_g55364_i0forward_frame_3 - 0.036 14.0 1.8 0.036 14.0 1.8 3.2 3 1 0 3 3 3 0 Trp-operon Leader Peptide BPD_transp_1 PF00528.22 NODE_63305_length_256_cov_1.773756_g55364_i0forward_frame_2 - 1.9e-12 47.3 0.9 2.1e-12 47.2 0.9 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Totivirus_coat PF05518.11 NODE_63303_length_256_cov_1.832579_g55362_i0reverse_frame_2 - 3.3 5.7 5.2 3.6 5.5 5.2 1.0 1 0 0 1 1 1 0 Totivirus coat protein XRN_N PF03159.18 NODE_63302_length_256_cov_1.886878_g55361_i0reverse_frame_2 - 0.21 11.0 0.6 0.24 10.8 0.6 1.1 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus SIS_2 PF13580.6 NODE_63297_length_256_cov_1.977376_g55356_i0reverse_frame_3 - 0.0012 18.8 0.3 0.66 10.0 0.1 2.2 1 1 1 2 2 2 2 SIS domain NOB1_Zn_bind PF08772.11 NODE_63297_length_256_cov_1.977376_g55356_i0forward_frame_3 - 0.0021 18.2 0.0 0.43 10.8 0.0 2.2 1 1 1 2 2 2 2 Nin one binding (NOB1) Zn-ribbon like zf-CCHC_6 PF15288.6 NODE_63297_length_256_cov_1.977376_g55356_i0forward_frame_3 - 0.0036 17.1 0.5 1.3 8.9 0.1 2.3 1 1 1 2 2 2 2 Zinc knuckle Asp5 PF17000.5 NODE_63297_length_256_cov_1.977376_g55356_i0forward_frame_2 - 0.39 10.9 1.7 14 5.9 0.1 2.2 1 1 0 2 2 2 0 Accessory secretory protein Sec, Asp5 Glyco_hydro_31 PF01055.26 NODE_63295_length_256_cov_2.004525_g55354_i0reverse_frame_3 - 4e-16 59.3 1.9 4e-16 59.2 1.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 CAAX_1 PF15895.5 NODE_63294_length_256_cov_2.004525_g55353_i0reverse_frame_2 - 0.018 15.0 0.6 0.02 14.8 0.6 1.0 1 0 0 1 1 1 0 CAAX box cerebral protein 1 PEP-utilizers_C PF02896.18 NODE_63293_length_256_cov_2.113122_g55352_i0reverse_frame_2 - 0.027 13.6 0.1 0.03 13.4 0.1 1.0 1 0 0 1 1 1 0 PEP-utilising enzyme, TIM barrel domain SnAC PF14619.6 NODE_63292_length_256_cov_2.122172_g55351_i0reverse_frame_3 - 0.034 14.8 0.8 0.048 14.3 0.8 1.3 1 1 0 1 1 1 0 Snf2-ATP coupling, chromatin remodelling complex CagY_I PF14585.6 NODE_63292_length_256_cov_2.122172_g55351_i0reverse_frame_3 - 0.04 14.0 1.1 0.062 13.4 1.1 1.3 1 0 0 1 1 1 0 CagY type 1 repeat TRP PF06011.12 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 0.0043 15.8 5.4 0.005 15.6 5.4 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF3270 PF11674.8 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 0.03 14.5 2.0 0.041 14.1 2.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF4282 PF14110.6 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 0.58 10.9 9.4 0.44 11.3 8.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4282) CrgA PF06781.12 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 5.6 7.1 8.2 0.19 11.8 0.7 2.1 1 1 1 2 2 2 0 Cell division protein CrgA Sarcolipin PF05366.11 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 8.9 6.1 10.9 1.4 8.7 3.8 2.5 2 0 0 2 2 2 0 Sarcolipin MRP-S35 PF10246.9 NODE_63289_length_256_cov_2.180995_g55348_i0reverse_frame_3 - 0.084 12.8 0.0 0.099 12.6 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein MRP-S35 Scs3p PF10261.9 NODE_63285_length_256_cov_2.230769_g55344_i0reverse_frame_2 - 0.004 16.7 1.1 0.0049 16.4 1.1 1.1 1 0 0 1 1 1 1 Inositol phospholipid synthesis and fat-storage-inducing TM zf-RanBP PF00641.18 NODE_63285_length_256_cov_2.230769_g55344_i0forward_frame_3 - 0.099 12.0 1.9 0.099 12.0 1.9 1.8 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Vesiculo_matrix PF06326.12 NODE_63284_length_256_cov_2.262443_g55343_i0forward_frame_2 - 0.02 14.7 0.2 0.022 14.6 0.2 1.0 1 0 0 1 1 1 0 Vesiculovirus matrix protein DUF1067 PF06362.11 NODE_63282_length_256_cov_2.285068_g55341_i0forward_frame_3 - 0.022 15.5 1.7 0.031 15.1 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1067) Hydrophob_seed PF14547.6 NODE_63279_length_256_cov_2.339367_g55338_i0reverse_frame_2 - 0.031 14.5 2.9 0.047 13.9 2.9 1.3 1 0 0 1 1 1 0 Hydrophobic seed protein PTPA PF03095.15 NODE_63277_length_256_cov_2.352941_g55336_i0forward_frame_3 - 1.2e-18 67.6 0.0 1.2e-18 67.6 0.0 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein RecG_N PF17190.4 NODE_63277_length_256_cov_2.352941_g55336_i0forward_frame_3 - 0.014 16.1 0.1 0.016 15.9 0.1 1.3 1 1 0 1 1 1 0 RecG N-terminal helical domain Rx_N PF18052.1 NODE_63277_length_256_cov_2.352941_g55336_i0forward_frame_3 - 0.097 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Rx N-terminal domain DUF4352 PF11611.8 NODE_63277_length_256_cov_2.352941_g55336_i0forward_frame_2 - 0.043 14.1 0.0 0.049 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4352) Aldose_epim PF01263.20 NODE_63272_length_256_cov_2.488688_g55331_i0reverse_frame_3 - 5e-08 32.6 0.4 5.8e-08 32.4 0.4 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase Fusion_gly_K PF01621.17 NODE_63272_length_256_cov_2.488688_g55331_i0forward_frame_3 - 0.018 14.1 0.0 0.018 14.1 0.0 1.0 1 0 0 1 1 1 0 Cell fusion glycoprotein K Spo12 PF05032.12 NODE_63269_length_256_cov_2.592760_g55328_i0reverse_frame_3 - 0.19 11.7 0.2 0.31 11.0 0.2 1.3 1 0 0 1 1 1 0 Spo12 family CAP_C PF08603.11 NODE_63268_length_256_cov_2.755656_g55327_i0forward_frame_3 - 0.014 15.0 1.6 0.016 14.8 1.6 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) C terminal DUF4513 PF14983.6 NODE_63268_length_256_cov_2.755656_g55327_i0forward_frame_2 - 0.11 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4513) DUF4508 PF14969.6 NODE_63259_length_256_cov_3.208145_g55318_i0forward_frame_2 - 0.14 12.4 0.2 0.19 12.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) GluR_Homer-bdg PF10606.9 NODE_63258_length_256_cov_3.244344_g55317_i0forward_frame_2 - 0.11 12.7 0.3 0.18 12.0 0.2 1.5 1 1 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor PUFD PF16553.5 NODE_63257_length_256_cov_3.352941_g55316_i0forward_frame_3 - 0.11 12.7 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 BCORL-PCGF1-binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks282.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks282.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks282.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks282.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PAM2 PF07145.15 NODE_63254_length_256_cov_3.601810_g55313_i0reverse_frame_2 - 1.2 9.0 5.4 23 5.0 0.6 3.1 1 1 0 2 2 2 0 Ataxin-2 C-terminal region ABC_tran PF00005.27 NODE_63253_length_256_cov_3.615385_g55312_i0reverse_frame_2 - 1.7e-12 48.0 0.0 1.8e-12 47.9 0.0 1.0 1 0 0 1 1 1 1 ABC transporter Oxidored_nitro PF00148.19 NODE_63253_length_256_cov_3.615385_g55312_i0reverse_frame_2 - 0.044 12.5 0.1 0.051 12.3 0.1 1.0 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase MORN PF02493.20 NODE_63247_length_256_cov_4.502262_g55306_i0reverse_frame_3 - 9.8e-10 37.8 8.0 1.2e-05 24.9 0.3 3.2 3 0 0 3 3 3 3 MORN repeat DUF648 PF04890.13 NODE_63247_length_256_cov_4.502262_g55306_i0forward_frame_3 - 0.034 13.9 0.4 0.053 13.3 0.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF648) DASH_Spc34 PF08657.10 NODE_63246_length_256_cov_4.638009_g55305_i0reverse_frame_2 - 0.0022 17.9 1.1 0.0023 17.8 1.1 1.1 1 0 0 1 1 1 1 DASH complex subunit Spc34 DUF4028 PF13220.6 NODE_63243_length_256_cov_7.085973_g55302_i0reverse_frame_3 - 0.052 13.3 0.1 0.08 12.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) DUF4520 PF15016.6 NODE_63243_length_256_cov_7.085973_g55302_i0reverse_frame_2 - 0.0083 16.2 0.3 0.011 15.8 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4520) RIH_assoc PF08454.11 NODE_63240_length_256_cov_32.248869_g55299_i0reverse_frame_3 - 0.15 11.9 0.9 0.22 11.4 0.9 1.3 1 1 0 1 1 1 0 RyR and IP3R Homology associated LrgB PF04172.16 NODE_63240_length_256_cov_32.248869_g55299_i0forward_frame_3 - 0.13 11.7 0.5 0.15 11.6 0.5 1.0 1 0 0 1 1 1 0 LrgB-like family DUF3822 PF12864.7 NODE_63235_length_256_cov_41.552036_g55294_i0reverse_frame_3 - 0.06 12.5 0.0 0.069 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3822) 2OG-FeII_Oxy_3 PF13640.6 NODE_63233_length_256_cov_44.162896_g55292_i0forward_frame_3 - 0.04 14.8 0.2 0.055 14.4 0.2 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily CPCFC PF17223.3 NODE_63229_length_256_cov_50.176471_g55288_i0reverse_frame_3 - 0.26 11.1 3.4 2.1 8.2 0.1 2.3 2 0 0 2 2 2 0 Cuticle protein CPCFC DUF3225 PF11533.8 NODE_63229_length_256_cov_50.176471_g55288_i0reverse_frame_2 - 0.039 13.7 0.0 0.048 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3225) DUF2200 PF09966.9 NODE_63229_length_256_cov_50.176471_g55288_i0forward_frame_2 - 5.7e-08 32.9 0.1 8.7e-08 32.3 0.1 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2200) GP41 PF00517.17 NODE_63227_length_256_cov_52.475113_g55286_i0reverse_frame_2 - 0.077 12.9 0.1 0.077 12.9 0.1 1.1 1 0 0 1 1 1 0 Retroviral envelope protein DUF2269 PF10027.9 NODE_63226_length_256_cov_56.809955_g55285_i0forward_frame_3 - 0.078 13.0 0.0 0.081 13.0 0.0 1.1 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2269) Chordopox_A30L PF06015.12 NODE_63225_length_256_cov_59.108597_g55284_i0reverse_frame_2 - 0.043 13.7 3.1 0.054 13.3 3.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus A30L protein SURF4 PF02077.15 NODE_63223_length_256_cov_63.067873_g55282_i0reverse_frame_3 - 0.039 13.5 0.3 0.045 13.3 0.3 1.0 1 0 0 1 1 1 0 SURF4 family DUF1540 PF07561.11 NODE_63218_length_256_cov_75.764706_g55277_i0forward_frame_2 - 0.05 13.9 1.0 0.07 13.4 1.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1540) Sugar_tr PF00083.24 NODE_63216_length_256_cov_77.352941_g55275_i0reverse_frame_3 - 0.049 12.5 0.1 0.049 12.5 0.1 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter HgmA PF04209.13 NODE_63214_length_256_cov_84.434389_g55273_i0reverse_frame_3 - 0.24 10.1 0.0 0.26 10.0 0.0 1.0 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase SpoVIF PF14069.6 NODE_63212_length_256_cov_91.592760_g55271_i0reverse_frame_3 - 0.03 14.1 2.4 0.044 13.6 2.4 1.5 1 1 0 1 1 1 0 Stage VI sporulation protein F ATP-cone PF03477.16 NODE_63212_length_256_cov_91.592760_g55271_i0reverse_frame_3 - 0.04 14.5 1.4 0.051 14.1 1.4 1.2 1 0 0 1 1 1 0 ATP cone domain HK_sensor PF16750.5 NODE_63212_length_256_cov_91.592760_g55271_i0reverse_frame_3 - 0.056 13.7 0.0 0.068 13.5 0.0 1.1 1 0 0 1 1 1 0 Sensor domain of 2-component histidine kinase DUF3704 PF12488.8 NODE_63211_length_256_cov_98.538462_g55270_i0forward_frame_2 - 0.14 11.9 0.6 18 5.1 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3704) Csa1 PF06023.12 NODE_63210_length_256_cov_101.443439_g55269_i0forward_frame_2 - 0.19 11.1 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated exonuclease Csa1 Ufm1 PF03671.14 NODE_63208_length_256_cov_106.895928_g55267_i0reverse_frame_2 - 0.11 12.6 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin fold modifier 1 protein Colipase-like PF15083.6 NODE_63198_length_256_cov_135.805430_g55257_i0forward_frame_3 - 0.069 13.3 2.8 0.1 12.8 2.8 1.3 1 0 0 1 1 1 0 Colipase-like PPP1R32 PF15691.5 NODE_63196_length_256_cov_142.515837_g55255_i0reverse_frame_3 - 0.15 11.1 0.0 0.17 11.0 0.0 1.0 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 32 MCR_beta PF02241.18 NODE_63192_length_256_cov_240.547511_g55251_i0forward_frame_2 - 0.25 10.9 0.0 0.35 10.4 0.0 1.2 1 0 0 1 1 1 0 Methyl-coenzyme M reductase beta subunit, C-terminal domain DUF3915 PF13054.6 NODE_63189_length_256_cov_323.628959_g55248_i0reverse_frame_3 - 0.93 9.5 5.0 0.29 11.1 1.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3915) RskA PF10099.9 NODE_63189_length_256_cov_323.628959_g55248_i0reverse_frame_3 - 3 8.1 9.6 3.8 7.8 9.6 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA zf-RING_5 PF14634.6 NODE_63189_length_256_cov_323.628959_g55248_i0reverse_frame_2 - 4.7e-05 23.2 0.2 6e-05 22.9 0.2 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_63189_length_256_cov_323.628959_g55248_i0reverse_frame_2 - 0.044 13.7 0.5 0.054 13.4 0.5 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Methyltransf_3 PF01596.17 NODE_63188_length_256_cov_413.927602_g55247_i0reverse_frame_3 - 1.1e-18 67.3 0.1 1.2e-18 67.1 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 NODE_63188_length_256_cov_413.927602_g55247_i0reverse_frame_3 - 0.16 13.0 0.0 0.28 12.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain HCV_NS2 PF01538.18 NODE_63186_length_256_cov_1146.954751_g55245_i0forward_frame_2 - 0.0023 17.6 0.4 0.0025 17.5 0.4 1.0 1 0 0 1 1 1 1 Hepatitis C virus non-structural protein NS2 Peptidase_M16 PF00675.20 NODE_63183_length_257_cov_0.837838_g55242_i0reverse_frame_2 - 9e-24 84.1 0.0 1e-23 84.0 0.0 1.0 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Hemocyanin_C PF03723.14 NODE_63182_length_257_cov_0.936937_g55241_i0forward_frame_3 - 0.019 14.3 0.1 0.022 14.1 0.1 1.1 1 0 0 1 1 1 0 Hemocyanin, ig-like domain DASH_Dam1 PF08653.10 NODE_63181_length_257_cov_0.963964_g55240_i0reverse_frame_3 - 0.0063 16.3 0.1 0.0093 15.7 0.1 1.3 1 0 0 1 1 1 1 DASH complex subunit Dam1 DUF4679 PF15728.5 NODE_63180_length_257_cov_0.977477_g55239_i0forward_frame_3 - 0.27 10.2 1.7 0.32 10.0 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) Ribosomal_L40e PF01020.17 NODE_63172_length_257_cov_1.081081_g55231_i0reverse_frame_2 - 4.8 7.2 9.5 1.3 9.0 1.1 2.2 2 0 0 2 2 2 0 Ribosomal L40e family UCR_hinge PF02320.16 NODE_63172_length_257_cov_1.081081_g55231_i0forward_frame_3 - 0.064 13.5 7.2 0.083 13.1 7.2 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein DNA_pol3_delta2 PF13177.6 NODE_63171_length_257_cov_1.081081_g55230_i0forward_frame_3 - 0.045 13.5 0.0 0.049 13.4 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Phasin_2 PF09361.10 NODE_63168_length_257_cov_1.126126_g55227_i0reverse_frame_2 - 0.045 14.0 0.1 0.068 13.4 0.1 1.2 1 0 0 1 1 1 0 Phasin protein DNA_pol_E_B PF04042.16 NODE_63168_length_257_cov_1.126126_g55227_i0reverse_frame_2 - 0.081 12.3 0.0 0.088 12.1 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B Importin_rep_3 PF18806.1 NODE_63168_length_257_cov_1.126126_g55227_i0reverse_frame_2 - 0.087 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Importin 13 repeat CoA_transf_3 PF02515.17 NODE_63166_length_257_cov_1.220721_g55225_i0forward_frame_3 - 2e-11 43.6 0.2 2.3e-11 43.5 0.2 1.0 1 0 0 1 1 1 1 CoA-transferase family III FANC_SAP PF18081.1 NODE_63166_length_257_cov_1.220721_g55225_i0forward_frame_3 - 0.00048 20.2 1.4 0.01 16.0 0.3 2.1 2 0 0 2 2 2 2 Fanconi anemia-associated nuclease SAP domain Glyco_hydro_72 PF03198.14 NODE_63164_length_257_cov_1.279279_g55223_i0reverse_frame_2 - 0.11 11.8 0.2 0.12 11.6 0.2 1.0 1 0 0 1 1 1 0 Glucanosyltransferase Phage-tail_3 PF13550.6 NODE_63161_length_257_cov_1.342342_g55220_i0forward_frame_2 - 0.024 14.5 2.4 0.026 14.4 2.4 1.1 1 0 0 1 1 1 0 Putative phage tail protein HECT PF00632.25 NODE_63156_length_257_cov_1.427928_g55215_i0forward_frame_2 - 4.6e-10 39.5 0.8 3.3e-07 30.1 0.1 2.0 1 1 1 2 2 2 2 HECT-domain (ubiquitin-transferase) Amb_V_allergen PF03913.13 NODE_63153_length_257_cov_1.450450_g55212_i0reverse_frame_2 - 0.053 13.5 0.3 0.1 12.6 0.3 1.4 1 0 0 1 1 1 0 Amb V Allergen GP40 PF11025.8 NODE_63153_length_257_cov_1.450450_g55212_i0forward_frame_3 - 0.15 11.9 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Glycoprotein GP40 of Cryptosporidium Cyclin PF08613.11 NODE_63141_length_257_cov_1.621622_g55200_i0reverse_frame_2 - 3.5e-05 24.2 0.4 3.7e-05 24.1 0.4 1.1 1 0 0 1 1 1 1 Cyclin BCL9 PF11502.8 NODE_63141_length_257_cov_1.621622_g55200_i0forward_frame_2 - 0.065 13.0 0.0 0.099 12.5 0.0 1.2 1 0 0 1 1 1 0 B-cell lymphoma 9 protein Imm51 PF15595.6 NODE_63139_length_257_cov_1.653153_g55198_i0forward_frame_3 - 0.0039 17.1 0.5 0.0046 16.9 0.5 1.1 1 0 0 1 1 1 1 Immunity protein 51 Vault_2 PF17794.1 NODE_63137_length_257_cov_1.689189_g55196_i0forward_frame_2 - 0.092 13.1 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Major Vault Protein repeat domain Mito_fiss_reg PF05308.11 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_3 - 0.00078 19.6 4.1 0.0009 19.4 4.1 1.0 1 0 0 1 1 1 1 Mitochondrial fission regulator CAP_N PF01213.19 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_3 - 0.035 13.6 8.0 0.046 13.2 8.0 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Plant_vir_prot PF01307.17 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_2 - 0.0018 18.5 2.6 0.0032 17.7 2.6 1.4 1 1 0 1 1 1 1 Plant viral movement protein RIFIN PF02009.16 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_2 - 0.24 11.2 3.0 0.3 10.9 3.0 1.1 1 0 0 1 1 1 0 Rifin DUF1676 PF07898.13 NODE_63135_length_257_cov_1.734234_g55194_i0forward_frame_3 - 0.024 14.7 7.2 0.029 14.4 7.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) TraG_N PF07916.11 NODE_63135_length_257_cov_1.734234_g55194_i0forward_frame_3 - 1 8.1 7.8 1.1 8.0 7.8 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF4148 PF13663.6 NODE_63135_length_257_cov_1.734234_g55194_i0forward_frame_2 - 0.55 10.5 8.6 5.9 7.2 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) RFX_DNA_binding PF02257.15 NODE_63134_length_257_cov_1.738739_g55193_i0forward_frame_3 - 0.11 13.2 1.0 3.2 8.5 0.1 2.1 2 0 0 2 2 2 0 RFX DNA-binding domain ABC_tran PF00005.27 NODE_63133_length_257_cov_1.765766_g55192_i0forward_frame_2 - 0.0011 19.5 0.0 0.0018 18.8 0.0 1.3 1 1 0 1 1 1 1 ABC transporter m_DGTX_Dc1a_b_c PF17491.2 NODE_63131_length_257_cov_1.788288_g55190_i0reverse_frame_2 - 0.1 13.3 4.2 0.15 12.8 4.2 1.2 1 0 0 1 1 1 0 Spider Toxins mu-diguetoxin-1 a, b and c BRI3BP PF14965.6 NODE_63130_length_257_cov_1.792793_g55189_i0reverse_frame_3 - 1.2 8.6 4.6 1.5 8.3 4.6 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 C2-C2_1 PF11618.8 NODE_63130_length_257_cov_1.792793_g55189_i0forward_frame_2 - 0.0088 16.1 0.1 0.0092 16.1 0.1 1.0 1 0 0 1 1 1 1 First C2 domain of RPGR-interacting protein 1 DHHC PF01529.20 NODE_63124_length_257_cov_1.905405_g55183_i0forward_frame_2 - 4.5e-24 85.1 0.2 4.8e-24 85.0 0.2 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase PV-1 PF06637.11 NODE_63124_length_257_cov_1.905405_g55183_i0forward_frame_2 - 0.02 13.7 0.1 0.021 13.7 0.1 1.1 1 0 0 1 1 1 0 PV-1 protein (PLVAP) DUF3270 PF11674.8 NODE_63119_length_257_cov_2.000000_g55178_i0forward_frame_3 - 0.068 13.4 8.4 0.11 12.7 8.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) Fer4_4 PF12800.7 NODE_63119_length_257_cov_2.000000_g55178_i0forward_frame_2 - 2.1 9.1 10.8 0.85 10.3 3.4 2.5 3 0 0 3 3 3 0 4Fe-4S binding domain TMEM215 PF15746.5 NODE_63114_length_257_cov_2.072072_g55173_i0reverse_frame_2 - 0.013 15.0 0.1 0.014 14.9 0.1 1.1 1 0 0 1 1 1 0 TMEM215 family SesA PF17107.5 NODE_63106_length_257_cov_2.225225_g55165_i0reverse_frame_2 - 0.0051 17.0 0.1 0.0063 16.7 0.1 1.0 1 0 0 1 1 1 1 N-terminal domain on NACHT_NTPase and P-loop NTPases HemN_C PF06969.16 NODE_63106_length_257_cov_2.225225_g55165_i0forward_frame_2 - 0.037 14.1 0.1 0.062 13.4 0.0 1.5 2 0 0 2 2 2 0 HemN C-terminal domain T2SSS_2 PF16549.5 NODE_63104_length_257_cov_2.279279_g55163_i0reverse_frame_2 - 4.5e-11 42.7 0.2 4.9e-11 42.6 0.2 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS) pilotin, S protein Rib_5-P_isom_A PF06026.14 NODE_63101_length_257_cov_2.297297_g55160_i0reverse_frame_3 - 4.3e-08 33.0 0.1 5.4e-08 32.6 0.1 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 NODE_63101_length_257_cov_2.297297_g55160_i0reverse_frame_3 - 0.00026 21.0 0.0 0.00028 20.9 0.0 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain Sugar-bind PF04198.13 NODE_63101_length_257_cov_2.297297_g55160_i0reverse_frame_3 - 0.053 12.7 0.1 0.053 12.7 0.1 1.1 1 0 0 1 1 1 0 Putative sugar-binding domain S1 PF00575.23 NODE_63099_length_257_cov_2.418919_g55158_i0reverse_frame_2 - 5.9e-10 39.4 0.0 7e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 S1 RNA binding domain PilZ PF07238.14 NODE_63099_length_257_cov_2.418919_g55158_i0reverse_frame_2 - 0.021 15.1 0.0 0.021 15.1 0.0 1.3 1 0 0 1 1 1 0 PilZ domain Entericidin PF08085.11 NODE_63090_length_257_cov_2.666667_g55149_i0reverse_frame_3 - 0.064 13.3 0.1 0.064 13.3 0.1 1.6 2 0 0 2 2 2 0 Entericidin EcnA/B family NTP_transf_3 PF12804.7 NODE_63090_length_257_cov_2.666667_g55149_i0reverse_frame_2 - 0.085 13.2 0.0 0.1 13.0 0.0 1.0 1 0 0 1 1 1 0 MobA-like NTP transferase domain 7tm_7 PF08395.12 NODE_63084_length_257_cov_3.067568_g55143_i0reverse_frame_3 - 0.018 14.3 0.2 0.019 14.2 0.2 1.0 1 0 0 1 1 1 0 7tm Chemosensory receptor DUF2254 PF10011.9 NODE_63084_length_257_cov_3.067568_g55143_i0reverse_frame_3 - 0.061 12.1 0.3 0.063 12.1 0.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) YlaH PF14036.6 NODE_63084_length_257_cov_3.067568_g55143_i0reverse_frame_3 - 0.088 13.1 1.8 1.3 9.4 1.7 2.0 1 1 0 1 1 1 0 YlaH-like protein ATP_synt_H PF05493.13 NODE_63084_length_257_cov_3.067568_g55143_i0reverse_frame_2 - 0.17 12.3 1.6 0.22 12.0 1.6 1.2 1 0 0 1 1 1 0 ATP synthase subunit H ATP-grasp_2 PF08442.10 NODE_63083_length_257_cov_3.184685_g55142_i0reverse_frame_3 - 2.6e-36 125.1 0.2 2.8e-36 125.0 0.2 1.0 1 0 0 1 1 1 1 ATP-grasp domain DUF1664 PF07889.12 NODE_63083_length_257_cov_3.184685_g55142_i0forward_frame_2 - 0.033 14.2 0.2 0.066 13.3 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Mrx7 PF10906.8 NODE_63073_length_257_cov_4.581081_g55132_i0forward_frame_3 - 0.06 13.6 0.2 0.1 12.9 0.2 1.4 1 0 0 1 1 1 0 MIOREX complex component 7 YlaC PF10777.9 NODE_63070_length_257_cov_17.054054_g55129_i0forward_frame_3 - 0.31 10.9 6.1 0.36 10.7 6.1 1.2 1 0 0 1 1 1 0 Inner membrane protein YlaC Casein_kappa PF00997.18 NODE_63069_length_257_cov_21.657658_g55128_i0reverse_frame_2 - 0.6 10.2 1.5 0.92 9.6 1.5 1.2 1 0 0 1 1 1 0 Kappa casein UPF0730 PF15827.5 NODE_63068_length_257_cov_24.648649_g55127_i0reverse_frame_2 - 0.0086 15.8 1.0 0.013 15.2 1.0 1.4 1 0 0 1 1 1 1 UPF0730 unknown protein family DUF5039 PF16442.5 NODE_63067_length_257_cov_26.292793_g55126_i0reverse_frame_3 - 0.0097 15.5 1.6 0.011 15.4 1.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5039) DUF1722 PF08349.11 NODE_63067_length_257_cov_26.292793_g55126_i0reverse_frame_3 - 0.022 15.0 2.2 0.027 14.8 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) IATP PF04568.12 NODE_63067_length_257_cov_26.292793_g55126_i0reverse_frame_3 - 0.33 11.4 2.5 0.51 10.8 2.5 1.3 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP RIH_assoc PF08454.11 NODE_63066_length_257_cov_29.563063_g55125_i0reverse_frame_3 - 0.022 14.6 1.7 0.037 13.9 1.7 1.3 1 0 0 1 1 1 0 RyR and IP3R Homology associated Auxin_canalis PF05703.11 NODE_63066_length_257_cov_29.563063_g55125_i0reverse_frame_3 - 0.095 12.6 0.3 0.095 12.6 0.3 1.0 1 0 0 1 1 1 0 Auxin canalisation Ion_trans PF00520.31 NODE_63062_length_257_cov_49.243243_g55121_i0reverse_frame_3 - 0.018 14.3 0.3 0.02 14.1 0.3 1.1 1 0 0 1 1 1 0 Ion transport protein CH_2 PF06294.11 NODE_63060_length_257_cov_51.716216_g55119_i0reverse_frame_3 - 8.6e-09 35.4 0.1 1.2e-08 34.9 0.1 1.2 1 0 0 1 1 1 1 CH-like domain in sperm protein Eno-Rase_FAD_bd PF07055.12 NODE_63052_length_257_cov_60.409910_g55111_i0reverse_frame_3 - 0.025 15.0 0.2 0.039 14.4 0.2 1.3 1 0 0 1 1 1 0 Enoyl reductase FAD binding domain XPG_I_2 PF12813.7 NODE_63052_length_257_cov_60.409910_g55111_i0reverse_frame_3 - 0.11 12.0 2.9 0.1 12.1 2.9 1.1 1 0 0 1 1 1 0 XPG domain containing DUF3985 PF13153.6 NODE_63049_length_257_cov_62.590090_g55108_i0reverse_frame_2 - 0.1 12.7 0.1 0.17 11.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3985) Fer4_4 PF12800.7 NODE_63047_length_257_cov_66.972973_g55106_i0forward_frame_3 - 6.2 7.6 8.9 12 6.7 4.1 2.3 1 1 1 2 2 2 0 4Fe-4S binding domain Abhydrolase_8 PF06259.12 NODE_63033_length_257_cov_94.963964_g55092_i0forward_frame_2 - 0.056 13.1 0.0 0.062 12.9 0.0 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase Mei4 PF13971.6 NODE_63031_length_257_cov_100.481982_g55090_i0reverse_frame_3 - 0.26 10.7 1.5 0.29 10.6 1.5 1.0 1 0 0 1 1 1 0 Meiosis-specific protein Mei4 DUF1201 PF06716.11 NODE_63030_length_257_cov_100.981982_g55089_i0forward_frame_3 - 0.24 11.4 2.4 0.2 11.7 1.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1201) PKD PF00801.20 NODE_63029_length_257_cov_108.270270_g55088_i0reverse_frame_2 - 0.038 13.8 0.9 0.12 12.3 0.3 1.8 1 1 1 2 2 2 0 PKD domain Ependymin PF00811.18 NODE_63029_length_257_cov_108.270270_g55088_i0reverse_frame_2 - 0.086 13.1 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Ependymin DUF4633 PF15464.6 NODE_63026_length_257_cov_114.364865_g55085_i0reverse_frame_2 - 0.16 12.2 0.6 0.19 11.8 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4633) DUF2157 PF09925.9 NODE_63025_length_257_cov_117.747748_g55084_i0reverse_frame_2 - 0.044 13.6 0.1 0.059 13.2 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Phage_T7_tail PF03906.14 NODE_63022_length_257_cov_132.085586_g55081_i0reverse_frame_2 - 0.13 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Phage T7 tail fibre protein Histone_H2A_C PF16211.5 NODE_63019_length_257_cov_165.333333_g55078_i0forward_frame_3 - 1.6 8.5 6.7 2.8 7.7 6.7 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A Rho_RNA_bind PF07497.12 NODE_63019_length_257_cov_165.333333_g55078_i0forward_frame_2 - 0.079 12.8 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain Rtf2 PF04641.12 NODE_63017_length_257_cov_242.963964_g55076_i0forward_frame_2 - 0.21 10.9 0.6 0.18 11.1 0.6 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger UNC119_bdg PF15435.6 NODE_63012_length_257_cov_8053.288288_g55071_i0forward_frame_2 - 0.067 12.7 0.1 0.089 12.3 0.1 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue He_PIG PF05345.12 NODE_63007_length_258_cov_1.044843_g55066_i0forward_frame_3 - 1.6 8.9 18.2 0.49 10.6 11.0 2.8 1 1 1 2 2 2 0 Putative Ig domain Cas6b_C PF17262.2 NODE_63005_length_258_cov_1.071749_g55064_i0forward_frame_3 - 0.14 12.2 1.1 0.38 10.9 0.3 1.8 1 1 1 2 2 2 0 Cas6b C-terminal domain DUF2933 PF11666.8 NODE_62998_length_258_cov_1.219731_g55057_i0reverse_frame_3 - 0.23 11.5 1.8 0.41 10.7 1.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2933) CT47 PF15623.6 NODE_62994_length_258_cov_1.309417_g55053_i0reverse_frame_3 - 0.24 11.2 0.1 0.29 10.9 0.1 1.0 1 0 0 1 1 1 0 Cancer/testis gene family 47 RVT_2 PF07727.14 NODE_62992_length_258_cov_1.354260_g55051_i0reverse_frame_2 - 1.3e-07 31.6 0.0 1.4e-07 31.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) HTH_23 PF13384.6 NODE_62992_length_258_cov_1.354260_g55051_i0reverse_frame_2 - 0.016 15.0 0.0 0.033 14.0 0.0 1.6 2 0 0 2 2 2 0 Homeodomain-like domain TCL1_MTCP1 PF01840.17 NODE_62989_length_258_cov_1.376682_g55048_i0forward_frame_2 - 0.046 13.4 0.3 0.051 13.2 0.3 1.1 1 0 0 1 1 1 0 TCL1/MTCP1 family Ras PF00071.22 NODE_62984_length_258_cov_1.452915_g55043_i0reverse_frame_2 - 3.4e-13 49.5 0.0 5.1e-13 48.9 0.0 1.3 1 0 0 1 1 1 1 Ras family Trp_Tyr_perm PF03222.13 NODE_62983_length_258_cov_1.457399_g55042_i0forward_frame_3 - 0.0027 16.8 3.3 0.003 16.7 3.3 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 NODE_62983_length_258_cov_1.457399_g55042_i0forward_frame_3 - 0.0043 15.8 5.4 0.0045 15.8 5.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DHHC PF01529.20 NODE_62983_length_258_cov_1.457399_g55042_i0forward_frame_3 - 0.051 13.7 3.7 0.058 13.5 3.7 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase YrhC PF14143.6 NODE_62982_length_258_cov_1.461883_g55041_i0reverse_frame_3 - 0.099 12.8 0.5 0.14 12.3 0.5 1.2 1 0 0 1 1 1 0 YrhC-like protein SMP_C2CD2L PF18696.1 NODE_62979_length_258_cov_1.533632_g55038_i0reverse_frame_2 - 0.0095 15.8 0.1 0.011 15.6 0.1 1.0 1 0 0 1 1 1 1 Synaptotagmin-like, mitochondrial and lipid-binding domain MMR_HSR1 PF01926.23 NODE_62979_length_258_cov_1.533632_g55038_i0forward_frame_3 - 1.3e-06 28.5 0.0 1.5e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Chordopox_A20R PF05941.13 NODE_62976_length_258_cov_1.560538_g55035_i0reverse_frame_2 - 0.049 12.6 0.1 0.052 12.5 0.1 1.1 1 0 0 1 1 1 0 Chordopoxvirus A20R protein WD40 PF00400.32 NODE_62971_length_258_cov_1.677130_g55030_i0reverse_frame_3 - 0.00043 21.0 0.1 0.00075 20.3 0.0 1.6 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_62971_length_258_cov_1.677130_g55030_i0reverse_frame_3 - 0.012 15.9 0.0 0.024 14.9 0.0 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain RL PF17797.1 NODE_62971_length_258_cov_1.677130_g55030_i0reverse_frame_3 - 0.028 14.4 0.0 0.085 12.8 0.0 1.7 2 0 0 2 2 2 0 RL domain SieB PF14163.6 NODE_62970_length_258_cov_1.681614_g55029_i0reverse_frame_3 - 0.09 12.3 1.9 0.11 12.0 1.9 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B U1snRNP70_N PF12220.8 NODE_62970_length_258_cov_1.681614_g55029_i0reverse_frame_3 - 0.92 10.2 8.3 1.1 9.9 8.3 1.1 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Med19 PF10278.9 NODE_62970_length_258_cov_1.681614_g55029_i0reverse_frame_3 - 2.3 8.1 15.8 2.6 8.0 15.8 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Sec62 PF03839.16 NODE_62970_length_258_cov_1.681614_g55029_i0reverse_frame_3 - 5.4 6.5 11.8 6.1 6.3 11.8 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 SPECT1 PF18680.1 NODE_62967_length_258_cov_1.730942_g55026_i0reverse_frame_2 - 0.038 13.7 1.1 0.042 13.5 1.1 1.1 1 0 0 1 1 1 0 Plasmodium host cell traversal SPECT1 Utp14 PF04615.13 NODE_62964_length_258_cov_1.762332_g55023_i0reverse_frame_3 - 1.5e-07 30.4 1.0 1.7e-07 30.3 1.0 1.0 1 0 0 1 1 1 1 Utp14 protein RR_TM4-6 PF06459.12 NODE_62962_length_258_cov_1.775785_g55021_i0forward_frame_3 - 0.13 12.1 0.2 0.18 11.6 0.2 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Vps23_core PF09454.10 NODE_62962_length_258_cov_1.775785_g55021_i0forward_frame_2 - 0.0092 15.9 0.1 0.013 15.4 0.1 1.2 1 0 0 1 1 1 1 Vps23 core domain DUF3073 PF11273.8 NODE_62961_length_258_cov_1.780269_g55020_i0forward_frame_2 - 0.28 12.0 0.7 0.48 11.2 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3073) PAXIP1_C PF15364.6 NODE_62959_length_258_cov_1.811659_g55018_i0reverse_frame_2 - 0.069 13.5 7.3 0.078 13.3 7.3 1.0 1 0 0 1 1 1 0 PAXIP1-associated-protein-1 C term PTIP binding protein Anoctamin PF04547.12 NODE_62956_length_258_cov_1.825112_g55015_i0forward_frame_2 - 0.00028 19.9 0.1 0.00028 19.9 0.1 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel DUF5488 PF17590.2 NODE_62956_length_258_cov_1.825112_g55015_i0forward_frame_2 - 0.023 14.4 0.3 0.17 11.6 0.0 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5488) TMEM18 PF14770.6 NODE_62956_length_258_cov_1.825112_g55015_i0forward_frame_2 - 0.062 13.3 0.2 0.069 13.2 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 DUF3465 PF11948.8 NODE_62956_length_258_cov_1.825112_g55015_i0forward_frame_2 - 0.15 12.0 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3465) DNA_methylase PF00145.17 NODE_62955_length_258_cov_1.847534_g55014_i0reverse_frame_2 - 0.059 12.7 0.0 0.06 12.7 0.0 1.1 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Toxin_14 PF07829.11 NODE_62952_length_258_cov_1.896861_g55011_i0reverse_frame_2 - 2.7 8.0 10.0 2.4 8.2 0.6 2.7 2 1 0 2 2 2 0 Alpha-A conotoxin PIVA-like protein TMEM154 PF15102.6 NODE_62949_length_258_cov_1.937220_g55008_i0forward_frame_3 - 0.039 13.9 2.2 0.042 13.8 2.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Peptidase_S74 PF13884.6 NODE_62949_length_258_cov_1.937220_g55008_i0forward_frame_2 - 0.026 14.9 0.7 0.047 14.0 0.7 1.4 1 0 0 1 1 1 0 Chaperone of endosialidase CAP_C PF08603.11 NODE_62948_length_258_cov_1.955157_g55007_i0reverse_frame_3 - 0.0076 15.9 0.4 0.0081 15.8 0.4 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) C terminal SHQ1 PF04925.15 NODE_62943_length_258_cov_2.013453_g55002_i0forward_frame_2 - 0.13 11.8 0.1 0.15 11.6 0.1 1.1 1 0 0 1 1 1 0 SHQ1 protein DUF3519 PF12033.8 NODE_62942_length_258_cov_2.017937_g55001_i0reverse_frame_3 - 0.043 14.2 1.0 0.061 13.7 1.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3519) Spc7_C2 PF15577.6 NODE_62942_length_258_cov_2.017937_g55001_i0forward_frame_2 - 0.12 12.4 0.1 0.4 10.8 0.0 1.7 2 0 0 2 2 2 0 Spc7_C2 DASH_Dad4 PF08650.10 NODE_62940_length_258_cov_2.053812_g54999_i0reverse_frame_3 - 0.0083 16.1 1.2 0.015 15.3 1.1 1.5 1 1 0 1 1 1 1 DASH complex subunit Dad4 DUF3523 PF12037.8 NODE_62939_length_258_cov_2.080717_g54998_i0reverse_frame_2 - 0.037 13.4 0.1 0.046 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks283.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks283.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks283.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks283.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4596 PF15363.6 NODE_62937_length_258_cov_2.139013_g54996_i0reverse_frame_2 - 0.38 11.0 4.2 0.54 10.5 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4596) AAA_PrkA PF08298.11 NODE_62936_length_258_cov_2.147982_g54995_i0reverse_frame_2 - 6.8e-37 127.2 0.0 7.3e-37 127.1 0.0 1.0 1 0 0 1 1 1 1 PrkA AAA domain tRNA_bind_2 PF13725.6 NODE_62936_length_258_cov_2.147982_g54995_i0reverse_frame_2 - 0.089 12.5 0.0 3 7.5 0.0 2.0 1 1 1 2 2 2 0 Possible tRNA binding domain DDE_Tnp_1_5 PF13737.6 NODE_62935_length_258_cov_2.147982_g54994_i0reverse_frame_3 - 0.039 14.3 0.0 0.062 13.6 0.0 1.3 1 0 0 1 1 1 0 Transposase DDE domain Glu_cys_ligase PF04262.14 NODE_62933_length_258_cov_2.174888_g54992_i0reverse_frame_2 - 6.4e-32 110.6 0.1 6.9e-32 110.5 0.1 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase Nudc_N PF14050.6 NODE_62933_length_258_cov_2.174888_g54992_i0forward_frame_3 - 0.081 12.9 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. STALD PF18185.1 NODE_62933_length_258_cov_2.174888_g54992_i0forward_frame_2 - 0.019 14.3 0.0 0.022 14.1 0.0 1.0 1 0 0 1 1 1 0 Sir2- and TIR-associating SLOG family Plasmod_Pvs28 PF06247.11 NODE_62932_length_258_cov_2.197309_g54991_i0reverse_frame_3 - 0.043 14.1 2.3 0.049 13.9 1.0 1.9 2 1 0 2 2 2 0 Pvs28 EGF domain PH_17 PF18012.1 NODE_62932_length_258_cov_2.197309_g54991_i0forward_frame_3 - 0.081 12.7 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 PH domain GHL5 PF14872.6 NODE_62927_length_258_cov_2.304933_g54986_i0reverse_frame_3 - 0.14 10.2 0.1 0.15 10.1 0.1 1.0 1 0 0 1 1 1 0 Hypothetical glycoside hydrolase 5 DUF613 PF04764.12 NODE_62926_length_258_cov_2.327354_g54985_i0reverse_frame_2 - 0.018 15.2 1.2 0.021 14.9 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF613) DUF4094 PF13334.6 NODE_62925_length_258_cov_2.354260_g54984_i0reverse_frame_2 - 0.025 15.0 0.0 0.033 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) DUF4125 PF13526.6 NODE_62925_length_258_cov_2.354260_g54984_i0reverse_frame_2 - 0.083 12.5 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4125) LapA_dom PF06305.11 NODE_62925_length_258_cov_2.354260_g54984_i0reverse_frame_2 - 2 8.3 5.3 0.96 9.3 0.3 2.1 1 1 1 2 2 2 0 Lipopolysaccharide assembly protein A domain Methyltrans_Mon PF14314.6 NODE_62922_length_258_cov_2.394619_g54981_i0forward_frame_3 - 0.074 11.1 0.1 0.085 10.9 0.1 1.0 1 0 0 1 1 1 0 Virus-capping methyltransferase Ogr_Delta PF04606.12 NODE_62916_length_258_cov_2.520179_g54975_i0reverse_frame_2 - 0.0093 15.9 1.3 0.017 15.1 1.3 1.4 1 0 0 1 1 1 1 Ogr/Delta-like zinc finger FHIPEP PF00771.20 NODE_62916_length_258_cov_2.520179_g54975_i0forward_frame_2 - 2e-14 53.0 0.0 2.1e-14 53.0 0.0 1.0 1 0 0 1 1 1 1 FHIPEP family Thioredoxin_13 PF18401.1 NODE_62916_length_258_cov_2.520179_g54975_i0forward_frame_2 - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Botulinum_HA-17 PF05588.11 NODE_62915_length_258_cov_2.565022_g54974_i0reverse_frame_3 - 0.048 13.8 0.3 0.081 13.0 0.3 1.4 1 1 0 1 1 1 0 Clostridium botulinum HA-17 domain UBX PF00789.20 NODE_62913_length_258_cov_2.582960_g54972_i0forward_frame_3 - 2.9e-13 49.8 0.0 3.7e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 UBX domain MAT1 PF06391.13 NODE_62912_length_258_cov_2.609865_g54971_i0reverse_frame_3 - 0.01 15.7 1.5 0.011 15.5 1.5 1.0 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 BtrH_N PF14399.6 NODE_62904_length_258_cov_2.896861_g54963_i0reverse_frame_2 - 0.18 12.0 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal DNA_methylase PF00145.17 NODE_62904_length_258_cov_2.896861_g54963_i0forward_frame_2 - 5.9e-08 32.4 0.0 6.9e-08 32.2 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Mqo PF06039.15 NODE_62903_length_258_cov_2.901345_g54962_i0reverse_frame_2 - 8e-45 153.3 0.1 8.6e-45 153.2 0.1 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) Harakiri PF15196.6 NODE_62902_length_258_cov_2.937220_g54961_i0forward_frame_3 - 0.039 14.4 0.0 0.052 14.0 0.0 1.2 1 0 0 1 1 1 0 Activator of apoptosis harakiri FYVE PF01363.21 NODE_62900_length_258_cov_3.147982_g54959_i0reverse_frame_3 - 0.02 15.0 0.6 0.03 14.4 0.6 1.3 1 0 0 1 1 1 0 FYVE zinc finger LcrR PF09621.10 NODE_62900_length_258_cov_3.147982_g54959_i0reverse_frame_3 - 0.11 11.9 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Type III secretion system regulator (LcrR) Thioredoxin PF00085.20 NODE_62896_length_258_cov_3.466368_g54955_i0reverse_frame_2 - 0.077 13.0 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin Wzy_C PF04932.15 NODE_62896_length_258_cov_3.466368_g54955_i0forward_frame_3 - 0.0051 16.5 1.2 0.0062 16.2 1.2 1.1 1 0 0 1 1 1 1 O-Antigen ligase DUF1307 PF06998.11 NODE_62895_length_258_cov_3.529148_g54954_i0reverse_frame_3 - 0.059 13.4 0.0 0.063 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) ANP PF00212.18 NODE_62895_length_258_cov_3.529148_g54954_i0forward_frame_2 - 0.013 15.7 1.8 0.026 14.7 0.4 2.0 2 0 0 2 2 2 0 Atrial natriuretic peptide Bunya_NS-S PF01104.17 NODE_62893_length_258_cov_3.591928_g54952_i0forward_frame_3 - 0.0098 15.7 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 Bunyavirus non-structural protein NS-s zf-CSL PF05207.13 NODE_62892_length_258_cov_4.309417_g54951_i0reverse_frame_2 - 1.3 8.8 9.1 3.4 7.5 0.3 2.2 1 1 1 2 2 2 0 CSL zinc finger Comm PF15957.5 NODE_62892_length_258_cov_4.309417_g54951_i0forward_frame_3 - 0.083 13.2 0.1 0.098 13.0 0.1 1.1 1 0 0 1 1 1 0 Commissureless Pox_EPC_I2-L1 PF12575.8 NODE_62890_length_258_cov_4.457399_g54949_i0reverse_frame_2 - 0.018 15.3 1.0 0.026 14.7 1.0 1.3 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 PrgI PF12666.7 NODE_62888_length_258_cov_11.533632_g54947_i0reverse_frame_2 - 0.075 13.7 4.1 0.099 13.4 4.1 1.1 1 0 0 1 1 1 0 PrgI family protein DUF4181 PF13789.6 NODE_62888_length_258_cov_11.533632_g54947_i0reverse_frame_2 - 0.09 13.0 6.6 0.11 12.8 6.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) SAB PF04382.13 NODE_62888_length_258_cov_11.533632_g54947_i0forward_frame_3 - 0.014 15.4 1.9 0.028 14.5 1.9 1.6 1 1 0 1 1 1 0 SAB domain DUF4202 PF13875.6 NODE_62888_length_258_cov_11.533632_g54947_i0forward_frame_3 - 0.033 14.1 0.7 0.044 13.7 0.6 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4202) DUF4041 PF13250.6 NODE_62880_length_258_cov_51.641256_g54939_i0forward_frame_2 - 0.27 11.1 3.2 1.2 9.0 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4041) CoxIIa PF08113.11 NODE_62878_length_258_cov_52.726457_g54937_i0forward_frame_3 - 0.13 12.1 0.5 0.21 11.4 0.5 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IIa family DUF2039 PF10217.9 NODE_62877_length_258_cov_53.367713_g54936_i0reverse_frame_2 - 0.096 13.0 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) DASH_Ask1 PF08655.10 NODE_62870_length_258_cov_60.524664_g54929_i0forward_frame_3 - 0.016 15.1 0.1 0.032 14.1 0.1 1.6 1 1 0 1 1 1 0 DASH complex subunit Ask1 PHF12_MRG_bd PF16737.5 NODE_62870_length_258_cov_60.524664_g54929_i0forward_frame_3 - 0.19 11.5 0.2 0.33 10.7 0.2 1.3 1 0 0 1 1 1 0 PHD finger protein 12 MRG binding domain LacY_symp PF01306.19 NODE_62858_length_258_cov_81.000000_g54917_i0reverse_frame_2 - 0.064 12.0 3.1 0.068 11.9 3.1 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter Phage_holin_3_6 PF07332.11 NODE_62858_length_258_cov_81.000000_g54917_i0reverse_frame_2 - 0.22 11.5 3.0 0.29 11.2 3.0 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF1706 PF08020.11 NODE_62857_length_258_cov_85.376682_g54916_i0forward_frame_2 - 0.019 14.9 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1706) DSPc PF00782.20 NODE_62851_length_258_cov_99.304933_g54910_i0reverse_frame_3 - 1.8e-15 57.0 0.0 2.2e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain DHHC PF01529.20 NODE_62849_length_258_cov_109.013453_g54908_i0forward_frame_3 - 0.01 16.0 0.6 0.01 16.0 0.6 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase Phage_Mu_Gam PF07352.12 NODE_62846_length_258_cov_112.385650_g54905_i0reverse_frame_3 - 0.011 15.6 0.4 0.011 15.6 0.4 1.1 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein AAR2 PF05282.11 NODE_62846_length_258_cov_112.385650_g54905_i0forward_frame_2 - 0.88 8.9 3.7 0.88 8.9 3.7 1.1 1 0 0 1 1 1 0 AAR2 protein PP2C PF00481.21 NODE_62844_length_258_cov_120.237668_g54903_i0reverse_frame_2 - 1.3e-08 34.9 0.1 1.4e-08 34.7 0.1 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 NODE_62844_length_258_cov_120.237668_g54903_i0reverse_frame_2 - 0.017 15.0 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) Coronavirus_5 PF05528.11 NODE_62840_length_258_cov_141.134529_g54899_i0reverse_frame_3 - 0.075 13.0 0.0 0.098 12.6 0.0 1.3 1 1 0 1 1 1 0 Coronavirus gene 5 protein RsgA_N PF16745.5 NODE_62837_length_258_cov_165.977578_g54896_i0forward_frame_3 - 0.19 11.5 0.4 0.53 10.1 0.1 1.9 2 1 0 2 2 2 0 RsgA N-terminal domain Glyco_hydro_31 PF01055.26 NODE_62836_length_258_cov_174.506726_g54895_i0reverse_frame_2 - 1.2e-16 61.0 0.1 1.3e-16 60.8 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF2475 PF10629.9 NODE_62836_length_258_cov_174.506726_g54895_i0reverse_frame_2 - 0.12 12.6 0.1 0.16 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2475) DUF4790 PF16037.5 NODE_62836_length_258_cov_174.506726_g54895_i0forward_frame_3 - 0.048 14.1 0.3 0.06 13.8 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4790) HSP70 PF00012.20 NODE_62833_length_258_cov_11448.112108_g54892_i0reverse_frame_2 - 2.2e-35 121.9 0.0 2.4e-35 121.8 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein NAD-GH PF10712.9 NODE_62833_length_258_cov_11448.112108_g54892_i0forward_frame_3 - 7.9e-31 107.2 3.5 8.4e-31 107.1 3.5 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase GST_C_3 PF14497.6 ORF99339 - 1.7e-12 47.3 0.0 1.9e-12 47.2 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF99339 - 4.2e-07 30.1 0.1 6.7e-07 29.4 0.0 1.4 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF99339 - 4.5e-06 26.6 1.7 8.2e-06 25.8 0.1 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF99339 - 0.045 13.5 0.0 0.055 13.3 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Bac_surface_Ag PF01103.23 ORF99324 - 0.0032 17.0 0.0 0.0036 16.8 0.0 1.0 1 0 0 1 1 1 1 Surface antigen GPHH PF16905.5 ORF99324 - 0.26 11.1 0.5 1.9 8.3 0.0 2.0 2 0 0 2 2 2 0 Voltage-dependent L-type calcium channel, IQ-associated Phe_ZIP PF08916.11 ORF99245 - 0.016 15.9 0.7 0.62 10.8 0.2 2.2 2 0 0 2 2 2 0 Phenylalanine zipper VitD-bind_III PF09164.10 ORF99245 - 0.18 11.8 1.2 2.5 8.1 0.1 2.1 2 0 0 2 2 2 0 Vitamin D binding protein, domain III Cas6b_N PF17955.1 ORF98443 - 0.047 13.8 0.1 0.074 13.1 0.1 1.3 1 0 0 1 1 1 0 Cas6b N-terminal domain DUF3381 PF11861.8 ORF98420 - 5e-09 36.2 1.1 5.5e-09 36.0 1.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3381) Aa_trans PF01490.18 ORF98408 - 8.7e-08 31.3 4.6 9.4e-08 31.2 4.6 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein YMF19 PF02326.15 ORF98408 - 0.61 10.9 9.3 4.3 8.2 0.2 2.2 2 0 0 2 2 2 0 Plant ATP synthase F0 DUF1664 PF07889.12 ORF97032 - 0.0049 16.9 2.9 0.005 16.9 2.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) cwf18 PF08315.12 ORF97032 - 0.023 15.3 2.7 0.026 15.2 2.7 1.1 1 0 0 1 1 1 0 cwf18 pre-mRNA splicing factor SRI PF08236.11 ORF97032 - 0.047 13.9 2.1 0.054 13.7 2.1 1.3 1 1 0 1 1 1 0 SRI (Set2 Rpb1 interacting) domain CytadhesinP1 PF12378.8 ORF96976 - 0.23 11.7 0.0 0.31 11.2 0.0 1.2 1 0 0 1 1 1 0 Trypsin-sensitive surface-exposed protein VitD-bind_III PF09164.10 ORF96976 - 1.4 9.0 6.9 0.34 10.9 0.3 2.2 2 0 0 2 2 2 0 Vitamin D binding protein, domain III TM231 PF10149.9 ORF96342 - 1.3e-10 41.1 1.2 1.5e-10 40.9 1.2 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 TTL PF03133.15 ORF95171 - 8.4e-09 35.0 0.0 9.1e-09 34.9 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family CitMHS PF03600.16 ORF95121 - 2.3e-14 53.3 11.0 2.5e-14 53.2 11.0 1.0 1 0 0 1 1 1 1 Citrate transporter Na_sulph_symp PF00939.19 ORF95121 - 0.00025 20.2 4.7 0.00028 20.1 4.7 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region DASH_Dam1 PF08653.10 ORF94727 - 0.014 15.2 0.3 0.028 14.2 0.3 1.5 1 0 0 1 1 1 0 DASH complex subunit Dam1 HicB PF05534.12 ORF94633 - 0.17 11.8 0.3 0.28 11.0 0.3 1.3 1 0 0 1 1 1 0 HicB family CENP-O PF09496.10 ORF94553 - 0.099 12.6 0.0 0.099 12.6 0.0 1.1 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component LPD3 PF18798.1 ORF9379 - 0.02 15.1 0.2 0.023 14.9 0.2 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 3 DUF3475 PF11961.8 ORF9379 - 0.036 14.1 0.0 0.051 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3475) QueH PF02677.14 ORF9379 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Epoxyqueuosine reductase QueH Metallophos PF00149.28 ORF92998 - 9.7e-11 42.5 0.0 1.1e-10 42.4 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos PF00149.28 ORF92997 - 4.7e-09 37.0 0.0 5.5e-09 36.8 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase bPH_4 PF06713.11 ORF92997 - 0.029 14.4 0.0 0.041 14.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial PH domain baeRF_family10 PF18854.1 ORF92929 - 0.0088 16.3 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 DUF2387 PF09526.10 ORF92917 - 0.11 12.6 0.1 0.17 12.0 0.1 1.3 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) PMSR PF01625.21 ORF92889 - 6.1e-23 81.7 0.5 6.8e-23 81.5 0.5 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase DUF3008 PF11450.8 ORF92360 - 0.036 14.2 2.1 0.045 13.9 0.2 1.9 2 0 0 2 2 2 0 Protein of unknwon function (DUF3008) RhoGEF67_u1 PF16615.5 ORF92360 - 0.059 13.9 0.0 0.12 12.9 0.0 1.5 1 0 0 1 1 1 0 Unstructured region one on RhoGEF 6 and 7 Phage-tail_3 PF13550.6 ORF92360 - 0.12 12.2 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Putative phage tail protein DUF2674 PF10879.8 ORF922 - 0.075 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2674) HicB PF05534.12 ORF91601 - 0.17 11.8 0.3 0.28 11.0 0.3 1.3 1 0 0 1 1 1 0 HicB family eIF-3_zeta PF05091.12 ORF91202 - 0.5 9.3 12.4 0.47 9.4 12.4 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Spt20 PF12090.8 ORF91202 - 0.61 9.7 28.1 0.63 9.6 28.1 1.2 1 0 0 1 1 1 0 Spt20 family Orf78 PF06024.12 ORF91202 - 0.75 10.1 3.1 0.86 9.9 3.1 1.1 1 0 0 1 1 1 0 Orf78 (ac78) Presenilin PF01080.17 ORF91202 - 0.89 8.2 9.4 0.82 8.4 9.4 1.0 1 0 0 1 1 1 0 Presenilin DUF4407 PF14362.6 ORF91202 - 1 8.7 7.8 0.92 8.8 7.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) EOS1 PF12326.8 ORF91202 - 1.3 8.9 3.9 1.2 9.0 3.9 1.1 1 0 0 1 1 1 0 N-glycosylation protein SprA-related PF12118.8 ORF91202 - 1.5 7.9 17.3 1.3 8.1 17.3 1.1 1 0 0 1 1 1 0 SprA-related family EIIBC-GUT_N PF03612.14 ORF91202 - 2.1 8.1 7.7 2.1 8.0 7.7 1.1 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Cellulose_synt PF03552.14 ORF91202 - 2.9 6.3 4.2 3 6.2 4.2 1.0 1 0 0 1 1 1 0 Cellulose synthase DUF3464 PF11947.8 ORF91202 - 3.2 7.5 8.9 3.3 7.4 8.9 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 DUF4834 PF16118.5 ORF91202 - 8.1 7.5 14.5 9.8 7.2 14.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) TFIIA PF03153.13 ORF91202 - 8.6 6.2 28.4 8.9 6.2 28.4 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Peptidase_S49_N PF08496.10 ORF91202 - 8.7 6.4 9.9 10 6.2 9.9 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF192 PF02643.15 ORF90912 - 0.04 14.1 0.0 0.052 13.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized ACR, COG1430 LPP PF04728.13 ORF9088 - 2.1e-13 50.4 4.5 2.6e-13 50.1 4.5 1.1 1 0 0 1 1 1 1 Lipoprotein leucine-zipper Cluap1 PF10234.9 ORF9088 - 0.00061 19.3 0.1 0.00071 19.1 0.1 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 CLZ PF16526.5 ORF9088 - 0.0021 18.4 0.4 0.0032 17.8 0.3 1.3 1 1 0 1 1 1 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ZapB PF06005.12 ORF9088 - 0.0048 17.3 2.6 0.0065 16.9 2.6 1.1 1 0 0 1 1 1 1 Cell division protein ZapB DUF16 PF01519.16 ORF9088 - 0.0068 16.9 0.0 0.0079 16.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF16 DUF1993 PF09351.10 ORF9088 - 0.012 15.8 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) DivIC PF04977.15 ORF9088 - 0.016 15.0 0.2 0.018 14.8 0.2 1.2 1 0 0 1 1 1 0 Septum formation initiator Tropomyosin_1 PF12718.7 ORF9088 - 0.016 15.4 0.1 0.019 15.1 0.1 1.0 1 0 0 1 1 1 0 Tropomyosin like DUF4201 PF13870.6 ORF9088 - 0.016 15.0 0.3 0.02 14.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) DUF2353 PF09789.9 ORF9088 - 0.018 14.4 0.1 0.02 14.3 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) Alanine_zipper PF11839.8 ORF9088 - 0.019 15.3 2.0 0.023 15.0 1.6 1.4 1 1 0 1 1 1 0 Alanine-zipper, major outer membrane lipoprotein Lebercilin PF15619.6 ORF9088 - 0.021 14.5 0.9 0.025 14.2 0.9 1.1 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease CCDC144C PF14915.6 ORF9088 - 0.021 14.0 0.6 0.024 13.8 0.6 1.0 1 0 0 1 1 1 0 CCDC144C protein coiled-coil region DUF5082 PF16888.5 ORF9088 - 0.024 14.9 0.8 0.032 14.5 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) PI3K_P85_iSH2 PF16454.5 ORF9088 - 0.034 13.7 0.0 0.036 13.7 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain CENP-F_N PF10481.9 ORF9088 - 0.035 13.8 0.1 0.042 13.5 0.1 1.0 1 0 0 1 1 1 0 Cenp-F N-terminal domain Lzipper-MIP1 PF14389.6 ORF9088 - 0.045 14.0 0.0 0.055 13.8 0.0 1.1 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 Glutaredoxin2_C PF04399.13 ORF9088 - 0.053 13.4 0.1 0.061 13.2 0.1 1.1 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain TMF_DNA_bd PF12329.8 ORF9088 - 0.063 13.3 1.3 0.079 13.0 1.3 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DLP_helical PF18709.1 ORF9088 - 0.077 12.2 0.4 0.091 11.9 0.4 1.0 1 0 0 1 1 1 0 Dynamin-like helical domain DUF3138 PF11336.8 ORF9088 - 0.08 11.5 0.5 0.077 11.6 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) SlyX PF04102.12 ORF9088 - 0.095 13.3 1.1 0.12 13.0 1.1 1.1 1 0 0 1 1 1 0 SlyX ABC_tran_CTD PF16326.5 ORF9088 - 0.12 12.7 0.7 0.15 12.3 0.7 1.2 1 0 0 1 1 1 0 ABC transporter C-terminal domain Vac_Fusion PF02346.16 ORF9088 - 0.14 11.8 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 Chordopoxvirus multifunctional envelope protein A27 DUF4988 PF16378.5 ORF9088 - 0.16 11.7 0.3 0.19 11.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function XhlA PF10779.9 ORF9088 - 2.2 8.5 3.9 0.69 10.2 0.3 1.9 2 1 1 3 3 2 0 Haemolysin XhlA DUF4407 PF14362.6 ORF9088 - 2.3 7.5 9.0 0.43 9.9 3.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Latarcin PF10279.9 ORF90365 - 0.0097 16.3 0.7 0.014 15.7 0.7 1.3 1 0 0 1 1 1 1 Latarcin precursor ABC_tran_CTD PF16326.5 ORF90365 - 0.045 14.0 1.3 0.24 11.7 0.7 2.0 1 1 1 2 2 2 0 ABC transporter C-terminal domain SLATT_6 PF18169.1 ORF90365 - 0.048 13.3 2.0 0.055 13.1 2.0 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 Tho2 PF11262.8 ORF90365 - 0.074 12.2 4.9 0.081 12.1 4.9 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Na_K-ATPase PF00287.18 ORF90219 - 0.86 8.7 3.4 1.1 8.4 3.4 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Thioredoxin_16 PF18569.1 ORF90026 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain DUF3035 PF11233.8 ORF89880 - 0.037 14.3 0.3 0.04 14.2 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) Blt1_C PF17183.4 ORF89666 - 0.086 12.4 0.1 0.15 11.7 0.1 1.3 1 0 0 1 1 1 0 Get5 carboxyl domain K-box PF01486.17 ORF89599 - 0.011 15.9 2.1 0.016 15.3 2.1 1.4 1 1 0 1 1 1 0 K-box region DUF4509 PF14970.6 ORF89599 - 0.033 14.1 0.3 0.034 14.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4509) Thioredoxin_16 PF18569.1 ORF89523 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain DctQ PF04290.12 ORF88963 - 0.0052 16.7 3.1 0.0062 16.4 3.1 1.3 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporters, DctQ component DUF983 PF06170.12 ORF88963 - 0.038 14.4 2.7 0.038 14.4 2.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF983) DUF4149 PF13664.6 ORF88963 - 0.25 11.7 4.9 0.22 11.9 4.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4149) PIG-Y PF15159.6 ORF88963 - 1.3 10.0 8.8 1.9 9.5 8.8 1.3 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DHHC PF01529.20 ORF88963 - 1.4 9.0 8.9 1.9 8.6 8.9 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF3139 PF11337.8 ORF88963 - 7.3 7.3 9.5 0.13 12.9 2.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) YidD PF01809.18 ORF8891 - 3.5e-31 106.9 0.1 4e-31 106.7 0.1 1.0 1 0 0 1 1 1 1 Putative membrane protein insertion efficiency factor Baculo_LEF5 PF04838.12 ORF88841 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF88841 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Phage_P2_GpE PF06528.12 ORF88686 - 0.84 9.2 3.7 6.8 6.3 0.1 2.8 3 0 0 3 3 3 0 Phage P2 GpE SpoIIM PF01944.17 ORF88654 - 0.049 13.7 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Stage II sporulation protein M Thioredoxin_16 PF18569.1 ORF88599 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain zf-C2H2_4 PF13894.6 ORF88229 - 0.0034 18.1 0.5 0.011 16.5 0.1 1.9 2 0 0 2 2 2 1 C2H2-type zinc finger CGI-121 PF08617.10 ORF88215 - 0.0057 16.8 0.6 0.0057 16.8 0.6 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 Spc7 PF08317.11 ORF88012 - 0.005 15.8 10.3 0.0051 15.7 10.3 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Fez1 PF06818.15 ORF88012 - 0.0056 17.2 7.7 0.0067 16.9 7.7 1.2 1 0 0 1 1 1 1 Fez1 Flagellin_C PF00700.21 ORF88012 - 0.0083 16.5 0.2 0.011 16.1 0.2 1.2 1 0 0 1 1 1 1 Bacterial flagellin C-terminal helical region DHR10 PF18595.1 ORF88012 - 0.01 15.9 9.4 0.014 15.4 9.4 1.3 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain BLOC1_2 PF10046.9 ORF88012 - 0.01 16.1 6.1 0.01 16.1 6.1 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ZapB PF06005.12 ORF88012 - 0.017 15.5 14.3 0.74 10.3 5.3 2.8 1 1 1 2 2 2 0 Cell division protein ZapB Occludin_ELL PF07303.13 ORF88012 - 0.035 14.8 9.5 0.041 14.6 9.5 1.1 1 0 0 1 1 1 0 Occludin homology domain HMMR_N PF15905.5 ORF88012 - 0.054 13.0 11.1 0.057 12.9 11.1 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF641 PF04859.12 ORF88012 - 0.059 13.7 4.7 0.069 13.5 4.7 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Prominin PF05478.11 ORF88012 - 0.075 11.0 2.5 0.086 10.8 2.5 1.0 1 0 0 1 1 1 0 Prominin TMPIT PF07851.13 ORF88012 - 0.13 11.5 6.7 0.14 11.4 6.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Fzo_mitofusin PF04799.13 ORF88012 - 0.16 11.5 1.8 0.25 10.9 1.6 1.4 1 1 0 1 1 1 0 fzo-like conserved region AAA_13 PF13166.6 ORF88012 - 0.19 10.4 8.5 0.19 10.3 8.5 1.0 1 0 0 1 1 1 0 AAA domain DUF724 PF05266.14 ORF88012 - 0.2 11.5 7.6 0.23 11.3 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Exonuc_VII_L PF02601.15 ORF88012 - 0.21 11.1 3.4 0.21 11.1 3.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4094 PF13334.6 ORF88012 - 0.26 11.7 1.2 0.35 11.3 1.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) DivIC PF04977.15 ORF88012 - 0.29 10.9 11.0 1.1 9.1 2.3 2.6 1 1 1 2 2 2 0 Septum formation initiator Prefoldin_2 PF01920.20 ORF88012 - 0.3 11.1 13.6 0.48 10.4 2.6 2.1 1 1 1 2 2 2 0 Prefoldin subunit DUF16 PF01519.16 ORF88012 - 0.37 11.3 6.0 0.44 11.0 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 Cep57_MT_bd PF06657.13 ORF88012 - 0.4 11.2 8.8 0.23 11.9 2.1 2.6 1 1 2 3 3 3 0 Centrosome microtubule-binding domain of Cep57 OmpH PF03938.14 ORF88012 - 0.43 10.9 8.6 0.53 10.6 8.6 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) PCRF PF03462.18 ORF88012 - 0.5 10.2 8.3 0.6 9.9 8.3 1.1 1 0 0 1 1 1 0 PCRF domain Tup_N PF08581.10 ORF88012 - 0.52 10.6 13.3 1.3 9.4 5.6 2.1 1 1 1 2 2 2 0 Tup N-terminal DUF4164 PF13747.6 ORF88012 - 0.7 10.2 8.0 2.2 8.6 4.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) UPF0242 PF06785.11 ORF88012 - 1.2 9.2 10.6 1.6 8.8 10.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Ax_dynein_light PF10211.9 ORF88012 - 1.5 8.7 11.4 1.9 8.4 11.4 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain Phage_Mu_Gam PF07352.12 ORF88012 - 1.5 8.7 10.8 7.7 6.4 10.8 1.8 1 1 0 1 1 1 0 Bacteriophage Mu Gam like protein DUF4407 PF14362.6 ORF88012 - 1.6 8.0 4.6 2.1 7.6 4.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) IFP_35_N PF07334.13 ORF88012 - 3.7 7.7 7.4 3.2 7.9 0.5 2.5 2 1 1 3 3 3 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus FapA PF03961.13 ORF88012 - 7.6 5.0 8.9 7.8 5.0 8.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A LAMTOR5 PF16672.5 ORF87785 - 0.043 13.8 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 Apis_Csd PF11671.8 ORF85573 - 0.013 15.6 2.9 0.014 15.4 2.9 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein Linker_histone PF00538.19 ORF85573 - 0.068 13.6 0.4 0.13 12.7 0.2 1.5 1 1 0 1 1 1 0 linker histone H1 and H5 family Baculo_LEF5 PF04838.12 ORF84890 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF84890 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family DUF535 PF04393.13 ORF84625 - 0.037 13.3 0.1 0.044 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF535) PrgI PF12666.7 ORF84625 - 0.064 14.0 0.1 0.075 13.8 0.1 1.3 1 0 0 1 1 1 0 PrgI family protein ABC_tran_CTD PF16326.5 ORF83841 - 0.093 13.0 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 ABC transporter C-terminal domain DUF4010 PF13194.6 ORF83807 - 0.0032 17.2 0.1 0.0035 17.0 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4010) DUF641 PF04859.12 ORF83643 - 0.012 15.9 3.6 0.015 15.7 3.6 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) MSA-2c PF12238.8 ORF83643 - 0.1 12.6 3.1 0.11 12.5 3.0 1.3 1 1 0 1 1 1 0 Merozoite surface antigen 2c DUF4407 PF14362.6 ORF83643 - 0.9 8.8 4.6 1.1 8.6 4.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YjhX_toxin PF09857.9 ORF836 - 4e-37 126.0 0.3 4.5e-37 125.9 0.3 1.0 1 0 0 1 1 1 1 Putative toxin of bacterial toxin-antitoxin pair Folliculin_C PF16692.5 ORF83168 - 0.019 14.7 0.2 0.022 14.5 0.2 1.0 1 0 0 1 1 1 0 Folliculin C-terminal domain Baculo_LEF5 PF04838.12 ORF8280 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF8280 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family SIS PF01380.22 ORF82663 - 0.0028 17.5 0.0 0.0046 16.8 0.0 1.3 1 0 0 1 1 1 1 SIS domain KASH_CCD PF14662.6 ORF82663 - 0.04 13.7 0.4 0.05 13.4 0.4 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH Baculo_LEF5 PF04838.12 ORF82184 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF82184 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family DHR10 PF18595.1 ORF80520 - 0.00097 19.2 3.3 0.0011 19.0 3.3 1.2 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain FlaC_arch PF05377.11 ORF80520 - 0.0012 19.2 2.6 0.002 18.5 2.3 1.5 1 1 0 1 1 1 1 Flagella accessory protein C (FlaC) ZapB PF06005.12 ORF80520 - 0.0036 17.7 6.1 0.0052 17.2 6.1 1.3 1 0 0 1 1 1 1 Cell division protein ZapB NYD-SP28_assoc PF14775.6 ORF80520 - 0.0038 17.3 10.9 0.0099 16.0 5.7 2.4 1 1 1 2 2 2 1 Sperm tail C-terminal domain DUF3450 PF11932.8 ORF80520 - 0.0039 16.5 2.8 0.004 16.5 2.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) bZIP_1 PF00170.21 ORF80520 - 0.0053 16.8 3.1 0.019 15.1 3.6 1.8 2 1 0 2 2 1 1 bZIP transcription factor DUF5082 PF16888.5 ORF80520 - 0.0072 16.6 3.2 0.0085 16.4 3.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) Cor1 PF04803.12 ORF80520 - 0.0087 16.3 4.4 0.012 15.9 4.4 1.2 1 0 0 1 1 1 1 Cor1/Xlr/Xmr conserved region SlyX PF04102.12 ORF80520 - 0.0093 16.6 4.6 0.012 16.2 4.6 1.2 1 0 0 1 1 1 1 SlyX FPP PF05911.11 ORF80520 - 0.011 14.0 2.5 0.012 13.9 2.5 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil ISG65-75 PF11727.8 ORF80520 - 0.015 14.5 0.9 0.018 14.3 0.9 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein Tropomyosin_1 PF12718.7 ORF80520 - 0.018 15.2 4.2 0.021 15.0 4.2 1.2 1 0 0 1 1 1 0 Tropomyosin like NPV_P10 PF05531.12 ORF80520 - 0.019 15.4 1.3 0.025 15.0 1.3 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein GIT_CC PF16559.5 ORF80520 - 0.019 14.8 3.8 0.031 14.1 3.8 1.4 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor TolA_bind_tri PF16331.5 ORF80520 - 0.026 14.6 5.4 0.033 14.2 5.4 1.2 1 0 0 1 1 1 0 TolA binding protein trimerisation PikAIV_N PF18605.1 ORF80520 - 0.036 13.6 0.2 0.089 12.4 0.2 1.8 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain DUF16 PF01519.16 ORF80520 - 0.048 14.2 3.3 0.059 13.9 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 APG6_N PF17675.1 ORF80520 - 0.056 14.0 5.3 0.064 13.8 5.3 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Prominin PF05478.11 ORF80520 - 0.069 11.1 2.5 0.071 11.1 2.5 1.0 1 0 0 1 1 1 0 Prominin MctB PF11382.8 ORF80520 - 0.094 12.4 0.6 0.1 12.3 0.6 1.0 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB Osmo_CC PF08946.10 ORF80520 - 0.1 12.8 8.8 0.15 12.3 0.9 2.4 1 1 1 2 2 2 0 Osmosensory transporter coiled coil BLOC1_2 PF10046.9 ORF80520 - 0.14 12.5 5.7 0.25 11.6 5.7 1.5 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ABC_tran_CTD PF16326.5 ORF80520 - 0.14 12.4 3.5 8.2 6.8 3.5 2.2 1 1 0 1 1 1 0 ABC transporter C-terminal domain bZIP_2 PF07716.15 ORF80520 - 0.15 12.2 5.0 0.39 10.8 5.0 1.8 1 1 0 1 1 1 0 Basic region leucine zipper DivIC PF04977.15 ORF80520 - 0.37 10.6 6.2 0.6 9.9 6.1 1.5 1 1 0 1 1 1 0 Septum formation initiator Baculo_LEF5 PF04838.12 ORF80082 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF80082 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Baculo_LEF5 PF04838.12 ORF79823 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF79823 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family DUF1518 PF07469.12 ORF79811 - 0.14 12.5 0.5 0.14 12.5 0.5 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1518) Succ_CoA_lig PF13607.6 ORF79778 - 0.047 13.5 0.2 0.054 13.3 0.2 1.2 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain TMF_TATA_bd PF12325.8 ORF79556 - 0.0017 18.6 4.9 0.0031 17.7 5.0 1.3 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding FlxA PF14282.6 ORF79556 - 0.28 11.2 9.1 0.53 10.3 9.1 1.4 1 1 0 1 1 1 0 FlxA-like protein SpoIIM PF01944.17 ORF79512 - 0.049 13.7 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Stage II sporulation protein M Peptidase_M60 PF13402.6 ORF79002 - 0.075 12.5 0.0 0.076 12.5 0.0 1.1 1 0 0 1 1 1 0 Peptidase M60, enhancin and enhancin-like 4HBT_2 PF13279.6 ORF79002 - 0.11 13.0 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Thioesterase-like superfamily S-l_SbsC_C PF18316.1 ORF79002 - 0.12 12.9 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 S-layer protein SbsC C-terminal domain HicB PF05534.12 ORF78967 - 0.17 11.8 0.3 0.28 11.0 0.3 1.3 1 0 0 1 1 1 0 HicB family PARP PF00644.20 ORF78823 - 0.0072 15.9 0.1 0.085 12.4 0.1 2.0 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain SpdB PF05122.13 ORF78592 - 0.0093 16.1 0.1 0.013 15.7 0.1 1.3 1 0 0 1 1 1 1 Mobile element transfer protein Herpes_UL69 PF05459.12 ORF76840 - 0.0081 15.5 0.3 0.01 15.2 0.3 1.2 1 0 0 1 1 1 1 Herpesvirus transcriptional regulator family Collagen_bind_2 PF12904.7 ORF76424 - 0.13 12.2 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Putative collagen-binding domain of a collagenase Connexin PF00029.19 ORF76336 - 0.17 11.6 0.3 0.2 11.4 0.3 1.0 1 0 0 1 1 1 0 Connexin DUF535 PF04393.13 ORF76314 - 0.037 13.3 0.1 0.044 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF535) PrgI PF12666.7 ORF76314 - 0.064 14.0 0.1 0.075 13.8 0.1 1.3 1 0 0 1 1 1 0 PrgI family protein DUF5559 PF17714.1 ORF75509 - 0.013 15.4 0.6 0.015 15.2 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5559) RCC1 PF00415.18 ORF75363 - 1.3e-10 41.8 0.1 1.9e-10 41.2 0.1 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF75363 - 0.00016 21.4 0.1 0.59 10.0 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat CNDH2_M PF16869.5 ORF75337 - 0.066 13.9 0.2 0.079 13.7 0.2 1.0 1 0 0 1 1 1 0 PF16858 OapA_N PF08525.11 ORF74264 - 0.015 15.2 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif FTA2 PF13095.6 ORF73596 - 0.00035 20.3 0.2 0.00035 20.3 0.2 1.2 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase PF00069.25 ORF73596 - 0.00074 19.0 0.6 0.00081 18.8 0.6 1.1 1 0 0 1 1 1 1 Protein kinase domain UPF0767 PF15990.5 ORF72984 - 0.36 11.0 3.5 0.41 10.8 3.0 1.4 1 1 0 1 1 1 0 UPF0767 family Peptidase_C3 PF00548.20 ORF72984 - 0.52 10.2 2.8 2.4 8.1 1.5 1.9 1 1 1 2 2 2 0 3C cysteine protease (picornain 3C) DUF3291 PF11695.8 ORF72851 - 0.033 13.9 0.0 0.038 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3291) zf-NADH-PPase PF09297.11 ORF72303 - 0.033 13.9 2.0 0.033 13.9 2.0 2.0 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Response_reg PF00072.24 ORF71638 - 1.8e-14 53.9 0.2 1.9e-14 53.8 0.2 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Prefoldin_2 PF01920.20 ORF7163 - 5.1e-12 45.7 3.0 6.1e-12 45.4 3.0 1.2 1 0 0 1 1 1 1 Prefoldin subunit Endonuc_BglI PF14562.6 ORF7163 - 0.0037 16.4 0.0 0.004 16.3 0.0 1.0 1 0 0 1 1 1 1 Restriction endonuclease BglI EF-hand_9 PF14658.6 ORF71177 - 0.026 14.8 0.0 0.037 14.4 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain Phage_int_SAM_4 PF13495.6 ORF71177 - 0.12 12.9 0.0 0.16 12.5 0.0 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Sharpin_PH PF16764.5 ORF71025 - 0.071 12.9 0.1 0.082 12.7 0.1 1.1 1 0 0 1 1 1 0 Sharpin PH domain Copine PF07002.16 ORF70857 - 2.6e-19 69.5 0.0 2.8e-19 69.4 0.0 1.0 1 0 0 1 1 1 1 Copine His_Phos_1 PF00300.22 ORF70781 - 6.1e-10 39.1 0.0 6.6e-10 39.0 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Ank_5 PF13857.6 ORF7030 - 7.8e-12 45.2 0.4 9.4e-08 32.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF7030 - 6.7e-10 39.0 0.0 8.4e-05 22.9 0.0 2.6 3 0 0 3 3 3 2 Ankyrin repeat Ank_2 PF12796.7 ORF7030 - 2.1e-09 37.8 0.2 2.7e-09 37.5 0.2 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF7030 - 5e-07 30.2 0.1 3.3e-06 27.5 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF7030 - 5.5e-06 26.3 0.1 0.031 14.8 0.0 2.7 3 0 0 3 3 3 2 Ankyrin repeat PhoD_N PF16655.5 ORF7030 - 0.035 14.6 0.0 0.053 14.1 0.0 1.2 1 0 0 1 1 1 0 PhoD-like phosphatase, N-terminal domain HA2 PF04408.23 ORF6982 - 6.3e-09 36.1 0.0 9.2e-09 35.6 0.0 1.4 1 1 0 1 1 1 1 Helicase associated domain (HA2) Ribosomal_S22 PF08136.11 ORF6982 - 0.066 13.6 0.2 0.11 12.9 0.2 1.3 1 0 0 1 1 1 0 30S ribosomal protein subunit S22 family Ceramidase_alk PF04734.13 ORF69812 - 0.022 13.4 0.0 0.023 13.4 0.0 1.0 1 0 0 1 1 1 0 Neutral/alkaline non-lysosomal ceramidase, N-terminal DEAD PF00270.29 ORF68867 - 0.00021 21.1 0.1 0.00034 20.4 0.0 1.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase T2SSE PF00437.20 ORF68867 - 0.058 12.4 0.0 0.06 12.4 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein ADP_ribosyl_GH PF03747.14 ORF68638 - 3.9e-08 33.4 0.6 4.5e-08 33.2 0.6 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase FeoB_associated PF12669.7 ORF67650 - 0.069 13.6 1.8 0.11 12.9 1.8 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein FliG_C PF01706.16 ORF66673 - 0.048 13.9 0.0 0.07 13.3 0.0 1.2 1 0 0 1 1 1 0 FliG C-terminal domain Baculo_LEF5 PF04838.12 ORF66440 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF66440 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Viral_NABP PF05515.11 ORF65907 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Viral nucleic acid binding Baculo_LEF5 PF04838.12 ORF65346 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF65346 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Sugar_tr PF00083.24 ORF64661 - 1.8e-06 27.1 0.0 2e-06 27.0 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF1229 PF06797.11 ORF64661 - 0.037 14.3 0.1 0.041 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1229) DUF1952 PF09189.10 ORF64593 - 0.021 14.6 0.1 0.033 14.0 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1952) T_cell_tran_alt PF15128.6 ORF64300 - 0.0065 16.2 0.0 0.0067 16.2 0.0 1.1 1 0 0 1 1 1 1 T-cell leukemia translocation-altered GWT1 PF06423.12 ORF64300 - 0.056 13.6 0.1 0.064 13.4 0.1 1.1 1 0 0 1 1 1 0 GWT1 DUF2207 PF09972.9 ORF64300 - 0.098 11.4 0.1 0.1 11.3 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1664 PF07889.12 ORF64132 - 0.014 15.4 6.2 0.018 15.1 6.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 ORF64132 - 0.019 15.1 7.3 0.019 15.1 7.3 1.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Nicastrin PF05450.15 ORF64132 - 0.022 14.2 0.7 0.027 13.9 0.7 1.3 1 1 0 1 1 1 0 Nicastrin XkdW PF09636.10 ORF64132 - 0.031 14.4 8.0 0.042 14.0 8.0 1.3 1 0 0 1 1 1 0 XkdW protein Laminin_II PF06009.12 ORF64132 - 0.035 14.1 9.1 0.043 13.8 9.1 1.1 1 0 0 1 1 1 0 Laminin Domain II DUF4250 PF14056.6 ORF64132 - 0.04 13.9 2.3 0.044 13.7 0.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4250) HMMR_N PF15905.5 ORF64132 - 0.044 13.2 20.2 0.047 13.2 20.2 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Lectin_N PF03954.14 ORF64132 - 0.045 13.5 4.8 0.071 12.8 4.8 1.4 1 1 0 1 1 1 0 Hepatic lectin, N-terminal domain TPR_MLP1_2 PF07926.12 ORF64132 - 0.046 13.8 20.1 0.23 11.5 19.5 1.9 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Zmiz1_N PF18028.1 ORF64132 - 0.047 14.0 0.3 0.058 13.7 0.3 1.2 1 0 0 1 1 1 0 Zmiz1 N-terminal tetratricopeptide repeat domain DUF812 PF05667.11 ORF64132 - 0.05 12.5 17.9 0.054 12.4 17.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) CP12 PF02672.15 ORF64132 - 0.05 14.4 7.5 0.05 14.4 7.5 1.9 1 1 1 2 2 2 0 CP12 domain Occludin_ELL PF07303.13 ORF64132 - 0.081 13.7 13.3 0.88 10.3 13.3 1.9 1 1 0 1 1 1 0 Occludin homology domain Jnk-SapK_ap_N PF09744.9 ORF64132 - 0.085 13.1 18.4 0.092 13.0 18.4 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF1633 PF07794.11 ORF64132 - 0.11 10.6 4.3 0.1 10.7 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) DIT1_PvcA PF05141.12 ORF64132 - 0.13 11.7 7.3 0.13 11.7 7.3 1.0 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein COG6 PF06419.11 ORF64132 - 0.13 10.4 10.2 0.15 10.3 10.2 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 HAUS6_N PF14661.6 ORF64132 - 0.16 11.5 11.8 0.18 11.4 11.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Spc7 PF08317.11 ORF64132 - 0.17 10.8 18.2 0.18 10.7 18.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Golgin_A5 PF09787.9 ORF64132 - 0.26 10.7 16.8 0.27 10.6 16.8 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 SHE3 PF17078.5 ORF64132 - 0.27 10.9 16.7 3.7 7.2 16.1 1.9 1 1 1 2 2 2 0 SWI5-dependent HO expression protein 3 TMPIT PF07851.13 ORF64132 - 0.39 9.9 13.7 0.43 9.8 13.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Fmp27_WPPW PF10359.9 ORF64132 - 0.56 9.0 14.0 0.62 8.9 14.0 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain YlqD PF11068.8 ORF64132 - 0.7 10.3 15.2 0.94 9.9 15.2 1.2 1 0 0 1 1 1 0 YlqD protein Rx_N PF18052.1 ORF64132 - 0.76 10.1 0.1 0.76 10.1 0.1 2.2 2 0 0 2 2 2 0 Rx N-terminal domain MPS2 PF17060.5 ORF64132 - 0.77 9.0 12.6 0.82 8.9 12.6 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 ZapB PF06005.12 ORF64132 - 1.4 9.5 25.2 0.19 12.2 15.2 2.1 1 1 1 2 2 2 0 Cell division protein ZapB XhlA PF10779.9 ORF64132 - 2.3 8.5 12.8 3.1 8.1 10.5 2.1 1 1 1 2 2 2 0 Haemolysin XhlA DUF4407 PF14362.6 ORF64132 - 2.3 7.5 10.2 2.5 7.4 10.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HSP70 PF00012.20 ORF64132 - 2.6 6.1 14.4 2.6 6.1 14.4 1.0 1 0 0 1 1 1 0 Hsp70 protein UPF0242 PF06785.11 ORF64132 - 3.3 7.8 18.7 4.5 7.3 18.7 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 ORF64132 - 3.8 6.0 17.5 4.3 5.8 17.5 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 ORF64132 - 4.1 6.4 14.2 5.3 6.0 14.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 V_ATPase_I PF01496.19 ORF64132 - 4.5 5.1 13.1 4.6 5.0 13.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Exonuc_VII_L PF02601.15 ORF64132 - 6.5 6.2 9.8 7.3 6.1 9.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit YabA PF06156.13 ORF64132 - 7.1 7.3 14.6 34 5.1 14.3 1.9 1 1 1 2 2 2 0 Initiation control protein YabA DUF3498 PF12004.8 ORF64132 - 8.2 5.5 15.2 9.2 5.3 15.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) DUF2408 PF10303.9 ORF64132 - 10 6.7 14.5 2.2e+02 2.4 14.5 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) OapA_N PF08525.11 ORF62019 - 0.015 15.2 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif SLT_L PF14718.6 ORF62005 - 0.022 14.9 0.2 0.031 14.4 0.2 1.3 1 0 0 1 1 1 0 Soluble lytic murein transglycosylase L domain DUF3232 PF11554.8 ORF62005 - 0.038 14.4 0.3 0.043 14.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) CytadhesinP1 PF12378.8 ORF61704 - 0.23 11.7 0.0 0.31 11.2 0.0 1.2 1 0 0 1 1 1 0 Trypsin-sensitive surface-exposed protein VitD-bind_III PF09164.10 ORF61704 - 1.4 9.0 6.9 0.34 10.9 0.3 2.2 2 0 0 2 2 2 0 Vitamin D binding protein, domain III Fe_hyd_SSU PF02256.17 ORF61215 - 0.013 15.6 0.6 0.02 15.0 0.6 1.3 1 0 0 1 1 1 0 Iron hydrogenase small subunit SVWC PF15430.6 ORF602 - 0.054 13.8 1.2 0.083 13.2 1.2 1.3 1 0 0 1 1 1 0 Single domain von Willebrand factor type C DUF3316 PF11777.8 ORF60035 - 0.023 14.7 0.2 0.024 14.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3316) Adhesin_P1_N PF18652.1 ORF60035 - 0.15 12.1 2.0 0.21 11.7 0.2 1.9 1 1 1 2 2 2 0 Adhesin P1 N-terminal domain Thioredoxin_16 PF18569.1 ORF59207 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain LAMTOR5 PF16672.5 ORF58714 - 0.043 13.8 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 COX14 PF14880.6 ORF58613 - 0.12 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Cytochrome oxidase c assembly Sigma70_r1_1 PF03979.14 ORF58191 - 0.22 11.6 0.0 0.31 11.1 0.0 1.2 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 LAMTOR5 PF16672.5 ORF57693 - 0.043 13.8 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 Glyco_transf_9 PF01075.17 ORF57044 - 3.5e-21 75.7 0.0 3.9e-21 75.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Baculo_LEF5 PF04838.12 ORF56981 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF56981 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Thioredoxin_16 PF18569.1 ORF56910 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain DUF3347 PF11827.8 ORF56741 - 0.045 13.9 0.1 0.052 13.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3347) Thioredoxin_16 PF18569.1 ORF56378 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_16 PF18569.1 ORF56239 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain CDC24_OB1 PF17246.2 ORF56141 - 0.067 13.3 0.7 0.076 13.1 0.7 1.2 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 1 SLATT_5 PF18160.1 ORF55250 - 0.008 15.5 0.3 0.0094 15.3 0.3 1.1 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 5 DUF2207 PF09972.9 ORF55250 - 0.094 11.5 0.6 0.1 11.4 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ABC_tran_CTD PF16326.5 ORF55074 - 0.098 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 ABC transporter C-terminal domain zf-CCCH_7 PF18586.1 ORF54913 - 0.14 12.5 0.1 0.19 12.1 0.1 1.2 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 CN_hydrolase PF00795.22 ORF5456 - 0.00051 19.5 0.0 0.00057 19.3 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase eIF2A PF08662.11 ORF5456 - 0.15 11.9 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A Biotin_lipoyl PF00364.22 ORF54490 - 0.075 12.9 0.3 0.093 12.6 0.3 1.2 1 0 0 1 1 1 0 Biotin-requiring enzyme DUF2151 PF10221.9 ORF51935 - 0.035 12.7 0.2 0.039 12.6 0.2 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator GluR_Homer-bdg PF10606.9 ORF51742 - 0.041 14.1 0.1 0.08 13.1 0.1 1.5 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor Baculo_LEF5 PF04838.12 ORF51326 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF51326 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Thioredoxin_6 PF13848.6 ORF5129 - 0.00056 19.9 0.6 0.00056 19.9 0.6 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain SL4P PF17618.2 ORF5129 - 0.0056 16.7 0.4 0.0057 16.7 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized Strongylid L4 protein DUF2887 PF11103.8 ORF5129 - 0.015 15.3 0.5 0.19 11.7 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2887) DUF1336 PF07059.12 ORF51165 - 6.9e-08 32.8 0.0 7.3e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1336) Conotoxin PF02950.17 ORF51134 - 0.0035 18.3 3.6 0.0042 18.1 3.6 1.1 1 0 0 1 1 1 1 Conotoxin UPF0506 PF11703.8 ORF51134 - 0.027 14.9 6.0 0.046 14.1 6.0 1.5 1 0 0 1 1 1 0 UPF0506 DEFB136 PF17333.2 ORF51117 - 0.086 12.8 1.7 0.17 11.8 1.7 1.5 1 1 0 1 1 1 0 Beta defensin 136 Integrase_Zn PF02022.19 ORF50859 - 0.083 12.9 0.2 0.14 12.1 0.2 1.3 1 0 0 1 1 1 0 Integrase Zinc binding domain WD40 PF00400.32 ORF50594 - 0.0035 18.1 1.6 0.016 16.0 0.6 2.4 3 0 0 3 3 3 1 WD domain, G-beta repeat BBS2_Mid PF14783.6 ORF50594 - 0.09 12.8 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, middle region AAA_25 PF13481.6 ORF50418 - 0.14 11.7 0.0 0.3 10.7 0.0 1.5 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 ORF50418 - 0.27 10.5 0.0 0.33 10.3 0.0 1.1 1 0 0 1 1 1 0 KaiC Pkinase PF00069.25 ORF50044 - 0.025 13.9 0.0 0.036 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain PSD5 PF07637.11 ORF49943 - 0.045 14.1 0.4 0.063 13.6 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1595) UreF PF01730.16 ORF49943 - 0.048 14.3 1.3 0.063 13.9 1.3 1.2 1 0 0 1 1 1 0 UreF ZYG-11_interact PF05884.12 ORF49825 - 0.17 11.3 0.4 0.19 11.1 0.4 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 DUF535 PF04393.13 ORF49787 - 0.037 13.3 0.1 0.044 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF535) PrgI PF12666.7 ORF49787 - 0.064 14.0 0.1 0.075 13.8 0.1 1.3 1 0 0 1 1 1 0 PrgI family protein Tir_receptor_N PF07490.11 ORF49611 - 0.46 10.3 3.4 0.43 10.4 0.3 2.0 1 1 1 2 2 2 0 Translocated intimin receptor (Tir) N-terminus EI24 PF07264.11 ORF49325 - 1.2 9.4 8.5 1.4 9.2 8.5 1.0 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) Baculo_LEF5 PF04838.12 ORF48813 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF48813 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family ATP-synt_B PF00430.18 ORF48452 - 0.14 12.2 0.2 0.19 11.8 0.2 1.1 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) Sugar_tr PF00083.24 ORF47590 - 3.1e-06 26.3 0.0 3.3e-06 26.2 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF1600 PF07667.11 ORF47467 - 0.0044 17.2 0.2 0.0053 16.9 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1600) SLY PF12485.8 ORF46315 - 0.063 14.0 5.5 0.06 14.1 5.0 1.3 1 1 0 1 1 1 0 Lymphocyte signaling adaptor protein PMD PF10536.9 ORF46216 - 0.17 11.0 1.8 0.17 11.0 1.8 1.0 1 0 0 1 1 1 0 Plant mobile domain MtrG PF04210.13 ORF46216 - 5.6 6.9 6.2 5.2 7.0 0.7 2.5 2 1 1 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G TatD_DNase PF01026.21 ORF44974 - 0.12 11.7 0.3 0.14 11.5 0.3 1.1 1 0 0 1 1 1 0 TatD related DNase STAG PF08514.11 ORF4436 - 0.0018 18.2 2.5 0.0024 17.7 2.5 1.3 1 0 0 1 1 1 1 STAG domain Herpes_UL69 PF05459.12 ORF43233 - 0.0081 15.5 0.3 0.01 15.2 0.3 1.2 1 0 0 1 1 1 1 Herpesvirus transcriptional regulator family OapA_N PF08525.11 ORF43024 - 0.015 15.2 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif PilZ PF07238.14 ORF42509 - 0.044 14.1 0.0 0.074 13.4 0.0 1.4 1 1 0 1 1 1 0 PilZ domain Sugar_tr PF00083.24 ORF42087 - 1.8e-06 27.1 0.0 2e-06 27.0 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF1229 PF06797.11 ORF42087 - 0.037 14.3 0.1 0.041 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1229) Flexi_CP PF00286.20 ORF41528 - 0.038 13.9 0.2 0.043 13.7 0.2 1.2 1 0 0 1 1 1 0 Viral coat protein Sial-lect-inser PF09264.10 ORF41246 - 0.16 11.7 0.0 0.19 11.5 0.0 1.0 1 0 0 1 1 1 0 Vibrio cholerae sialidase, lectin insertion DUF4139 PF13598.6 ORF41216 - 0.58 9.8 7.1 0.64 9.7 7.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) EF-hand_7 PF13499.6 ORF40979 - 4.9e-09 36.5 3.9 0.00019 21.8 0.6 1.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF40979 - 9.8e-07 27.9 0.4 1.8e-06 27.0 0.4 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF40979 - 6.9e-06 25.6 0.3 1.2e-05 24.8 0.3 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF40979 - 1.1e-05 24.7 0.2 2.1e-05 23.8 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF40979 - 0.02 14.7 0.3 0.03 14.1 0.3 1.4 1 0 0 1 1 1 0 EF-hand domain pair CytadhesinP1 PF12378.8 ORF40282 - 0.23 11.7 0.0 0.31 11.2 0.0 1.2 1 0 0 1 1 1 0 Trypsin-sensitive surface-exposed protein VitD-bind_III PF09164.10 ORF40282 - 1.4 9.0 6.9 0.34 10.9 0.3 2.2 2 0 0 2 2 2 0 Vitamin D binding protein, domain III KLRAQ PF10205.9 ORF40042 - 0.00066 19.9 8.9 0.0071 16.6 8.9 2.0 1 1 0 1 1 1 1 Predicted coiled-coil domain-containing protein TSC22 PF01166.18 ORF40042 - 0.039 14.3 4.9 0.47 10.8 0.4 2.4 2 0 0 2 2 2 0 TSC-22/dip/bun family YabA PF06156.13 ORF40042 - 0.12 13.0 8.0 0.049 14.3 4.6 1.8 1 1 1 2 2 2 0 Initiation control protein YabA RNase_E_G PF10150.9 ORF40042 - 0.13 11.7 4.6 0.12 11.7 4.6 1.1 1 0 0 1 1 1 0 Ribonuclease E/G family UPF0449 PF15136.6 ORF40042 - 0.16 12.5 6.6 0.19 12.2 6.6 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF40042 - 3 8.0 11.7 0.8 9.8 2.1 2.3 1 1 0 2 2 2 0 bZIP transcription factor Ribosomal_S17 PF00366.20 ORF39876 - 1.1e-21 76.7 0.1 1.3e-21 76.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 DUF922 PF06037.11 ORF39876 - 0.039 13.7 0.0 0.042 13.6 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) Sugar_tr PF00083.24 ORF39844 - 0.0017 17.3 1.0 0.0018 17.2 1.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2232 PF09991.9 ORF39844 - 0.004 16.4 2.3 0.0042 16.3 2.3 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2232) Pkinase PF00069.25 ORF39813 - 3.6e-32 111.8 0.0 3.9e-32 111.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39813 - 9.7e-19 67.7 0.0 1e-18 67.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF39813 - 1e-05 24.5 0.0 1.3e-05 24.2 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF39813 - 0.001 18.4 0.0 0.0019 17.6 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF39813 - 0.0013 18.1 0.0 0.0014 18.0 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF39813 - 0.0038 17.2 0.0 0.0045 16.9 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF39813 - 0.0057 15.6 0.0 0.0064 15.5 0.0 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 ORF39813 - 0.015 14.4 0.0 0.016 14.3 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 PP2C PF00481.21 ORF39808 - 7.3e-08 32.3 0.1 8.6e-08 32.1 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PAE PF03283.13 ORF39171 - 0.033 13.3 0.2 0.037 13.2 0.2 1.0 1 0 0 1 1 1 0 Pectinacetylesterase Peptidase_S49 PF01343.18 ORF3890 - 3.3e-10 40.1 0.0 4.7e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S49 GCS PF03074.16 ORF38402 - 8.4e-13 48.4 0.0 1e-12 48.2 0.0 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase CDV3 PF15359.6 ORF38033 - 0.1 13.1 1.8 0.12 12.9 1.8 1.3 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 CPT PF07931.12 ORF37372 - 0.15 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein BRF1 PF07741.13 ORF37312 - 0.066 13.6 4.1 0.89 9.9 0.2 2.1 1 1 1 2 2 2 0 Brf1-like TBP-binding domain AAA_25 PF13481.6 ORF36605 - 0.14 11.7 0.0 0.3 10.7 0.0 1.5 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 ORF36605 - 0.27 10.5 0.0 0.33 10.3 0.0 1.1 1 0 0 1 1 1 0 KaiC V_ATPase_I PF01496.19 ORF35922 - 0.34 8.8 4.4 0.34 8.8 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUSP PF06337.12 ORF358 - 1.1e-09 38.7 0.2 1.4e-09 38.5 0.2 1.1 1 0 0 1 1 1 1 DUSP domain Thioredoxin_8 PF13905.6 ORF35403 - 0.029 14.7 0.4 0.034 14.5 0.4 1.2 1 0 0 1 1 1 0 Thioredoxin-like ZYG-11_interact PF05884.12 ORF35401 - 0.064 12.7 0.0 0.072 12.5 0.0 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 CinA_KH PF18146.1 ORF34615 - 0.011 15.9 0.0 0.014 15.5 0.0 1.1 1 0 0 1 1 1 0 Damage-inducible protein CinA KH domain DUF406 PF04175.12 ORF34615 - 0.012 16.1 0.1 0.015 15.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF406) HSCB_C PF07743.13 ORF34615 - 0.034 14.6 0.3 0.048 14.1 0.3 1.2 1 0 0 1 1 1 0 HSCB C-terminal oligomerisation domain Tmemb_161AB PF10268.9 ORF33292 - 0.035 12.8 0.1 0.035 12.8 0.1 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB Pkinase PF00069.25 ORF33172 - 4.5e-06 26.2 0.0 5.4e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33172 - 0.017 14.4 0.0 0.02 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase DUF4718 PF15842.5 ORF33131 - 0.16 11.7 0.5 0.16 11.7 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) SBF_like PF13593.6 ORF3290 - 0.023 14.0 0.2 0.026 13.9 0.2 1.1 1 0 0 1 1 1 0 SBF-like CPA transporter family (DUF4137) Albumin_I_a PF16720.5 ORF32803 - 0.09 12.7 0.1 0.14 12.1 0.1 1.4 1 1 0 1 1 1 0 Albumin I chain a CPSF100_C PF13299.6 ORF31687 - 2 8.6 7.4 2.5 8.2 7.4 1.0 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal Biotin_lipoyl_2 PF13533.6 ORF30846 - 0.13 12.1 2.1 0.19 11.6 2.1 1.3 1 0 0 1 1 1 0 Biotin-lipoyl like Pkinase PF00069.25 ORF29806 - 4.5e-06 26.2 0.0 5.4e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29806 - 0.017 14.4 0.0 0.02 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase TetR_C_9 PF14514.6 ORF29628 - 0.072 13.2 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Pox_A32 PF04665.12 ORF28292 - 0.0024 17.4 0.0 0.0025 17.3 0.0 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein AAA_29 PF13555.6 ORF28292 - 0.0057 16.4 0.0 0.008 15.9 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 ORF28292 - 0.049 13.5 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 NACHT domain T2SSE PF00437.20 ORF28292 - 0.072 12.1 0.0 0.075 12.1 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_pol_Rpb1_6 PF04992.14 ORF28264 - 0.025 14.4 0.3 0.025 14.4 0.3 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 6 HIRAN PF08797.11 ORF28264 - 0.091 12.7 0.0 0.094 12.7 0.0 1.1 1 0 0 1 1 1 0 HIRAN domain SPT_ssu-like PF11779.8 ORF27394 - 5.1 6.8 12.8 1.9 8.2 8.8 2.1 1 1 1 2 2 2 0 Small subunit of serine palmitoyltransferase-like Nucleoporin_FG2 PF15967.5 ORF2699 - 0.0016 17.1 0.4 0.0019 16.8 0.4 1.0 1 0 0 1 1 1 1 Nucleoporin FG repeated region DUF4347 PF14252.6 ORF26985 - 0.076 12.9 0.0 0.091 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4347) Baculo_LEF5 PF04838.12 ORF26940 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF26940 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Holin_BhlA PF10960.8 ORF2693 - 0.2 11.6 0.0 0.29 11.1 0.0 1.2 1 0 0 1 1 1 0 BhlA holin family WD40 PF00400.32 ORF25552 - 3.8e-05 24.4 0.7 0.0032 18.3 0.2 2.7 3 0 0 3 3 3 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF25552 - 0.12 12.7 0.0 0.17 12.2 0.0 1.4 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain DUF535 PF04393.13 ORF25533 - 0.037 13.3 0.1 0.044 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF535) PrgI PF12666.7 ORF25533 - 0.064 14.0 0.1 0.075 13.8 0.1 1.3 1 0 0 1 1 1 0 PrgI family protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks284.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks284.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks284.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks284.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:02:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FANC_SAP PF18081.1 ORF24740 - 0.13 12.5 0.6 0.13 12.5 0.6 1.7 2 0 0 2 2 2 0 Fanconi anemia-associated nuclease SAP domain RMMBL PF07521.12 ORF24560 - 0.19 11.7 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain vMSA PF00695.19 ORF24490 - 0.057 12.5 1.2 0.065 12.3 1.2 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus FATC PF02260.20 ORF2407 - 7.8e-12 44.8 0.0 1e-11 44.4 0.0 1.2 1 0 0 1 1 1 1 FATC domain DUF4715 PF15835.5 ORF2407 - 0.088 12.9 0.0 0.11 12.6 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4715) DUF4279 PF14106.6 ORF2407 - 0.12 12.6 0.2 7.7 6.8 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4279) 2-oxogl_dehyd_N PF16078.5 ORF23506 - 0.019 14.5 0.0 0.025 14.1 0.0 1.2 1 0 0 1 1 1 0 2-oxoglutarate dehydrogenase N-terminus AMO PF02461.16 ORF23506 - 0.058 13.2 0.3 0.062 13.1 0.3 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase R2K_2 PF18299.1 ORF23506 - 0.07 13.0 0.0 0.079 12.8 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 2 EF-hand_7 PF13499.6 ORF23487 - 6.4e-09 36.1 4.0 0.0002 21.7 0.1 1.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF23487 - 1.1e-06 27.8 0.6 2.2e-06 26.8 0.6 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF23487 - 2.3e-06 27.1 0.5 4.7e-06 26.1 0.5 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF23487 - 3.1e-06 26.4 0.4 7.2e-06 25.3 0.4 1.6 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF23487 - 0.013 15.3 0.3 0.02 14.7 0.3 1.4 1 0 0 1 1 1 0 EF-hand domain pair Ank_4 PF13637.6 ORF23456 - 0.00013 22.4 0.1 0.00039 20.9 0.1 1.8 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF23456 - 0.00022 21.5 0.1 0.041 14.3 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF23456 - 0.0004 20.9 0.0 0.00068 20.2 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF23456 - 0.0065 16.8 0.1 0.026 14.9 0.1 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF23456 - 0.02 15.4 0.2 4.4 8.2 0.1 3.1 3 1 0 3 3 3 0 Ankyrin repeat DUF2863 PF11062.8 ORF23456 - 0.094 11.1 0.0 0.1 11.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2863) DUF2389 PF09493.10 ORF23443 - 0.18 12.5 0.0 0.29 11.8 0.0 1.4 1 0 0 1 1 1 0 Tryptophan-rich protein (DUF2389) DHR10 PF18595.1 ORF23234 - 0.00097 19.2 3.3 0.0011 19.0 3.3 1.2 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain FlaC_arch PF05377.11 ORF23234 - 0.0012 19.2 2.6 0.002 18.5 2.3 1.5 1 1 0 1 1 1 1 Flagella accessory protein C (FlaC) ZapB PF06005.12 ORF23234 - 0.0036 17.7 6.1 0.0052 17.2 6.1 1.3 1 0 0 1 1 1 1 Cell division protein ZapB NYD-SP28_assoc PF14775.6 ORF23234 - 0.0038 17.3 10.9 0.0099 16.0 5.7 2.4 1 1 1 2 2 2 1 Sperm tail C-terminal domain DUF3450 PF11932.8 ORF23234 - 0.0039 16.5 2.8 0.004 16.5 2.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) bZIP_1 PF00170.21 ORF23234 - 0.0053 16.8 3.1 0.019 15.1 3.6 1.8 2 1 0 2 2 1 1 bZIP transcription factor DUF5082 PF16888.5 ORF23234 - 0.0072 16.6 3.2 0.0085 16.4 3.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) Cor1 PF04803.12 ORF23234 - 0.0087 16.3 4.4 0.012 15.9 4.4 1.2 1 0 0 1 1 1 1 Cor1/Xlr/Xmr conserved region SlyX PF04102.12 ORF23234 - 0.0093 16.6 4.6 0.012 16.2 4.6 1.2 1 0 0 1 1 1 1 SlyX FPP PF05911.11 ORF23234 - 0.011 14.0 2.5 0.012 13.9 2.5 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil ISG65-75 PF11727.8 ORF23234 - 0.015 14.5 0.9 0.018 14.3 0.9 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein Tropomyosin_1 PF12718.7 ORF23234 - 0.018 15.2 4.2 0.021 15.0 4.2 1.2 1 0 0 1 1 1 0 Tropomyosin like NPV_P10 PF05531.12 ORF23234 - 0.019 15.4 1.3 0.025 15.0 1.3 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein GIT_CC PF16559.5 ORF23234 - 0.019 14.8 3.8 0.031 14.1 3.8 1.4 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor TolA_bind_tri PF16331.5 ORF23234 - 0.026 14.6 5.4 0.033 14.2 5.4 1.2 1 0 0 1 1 1 0 TolA binding protein trimerisation PikAIV_N PF18605.1 ORF23234 - 0.036 13.6 0.2 0.089 12.4 0.2 1.8 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain DUF16 PF01519.16 ORF23234 - 0.048 14.2 3.3 0.059 13.9 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 APG6_N PF17675.1 ORF23234 - 0.056 14.0 5.3 0.064 13.8 5.3 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Prominin PF05478.11 ORF23234 - 0.069 11.1 2.5 0.071 11.1 2.5 1.0 1 0 0 1 1 1 0 Prominin MctB PF11382.8 ORF23234 - 0.094 12.4 0.6 0.1 12.3 0.6 1.0 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB Osmo_CC PF08946.10 ORF23234 - 0.1 12.8 8.8 0.15 12.3 0.9 2.4 1 1 1 2 2 2 0 Osmosensory transporter coiled coil BLOC1_2 PF10046.9 ORF23234 - 0.14 12.5 5.7 0.25 11.6 5.7 1.5 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ABC_tran_CTD PF16326.5 ORF23234 - 0.14 12.4 3.5 8.2 6.8 3.5 2.2 1 1 0 1 1 1 0 ABC transporter C-terminal domain bZIP_2 PF07716.15 ORF23234 - 0.15 12.2 5.0 0.39 10.8 5.0 1.8 1 1 0 1 1 1 0 Basic region leucine zipper DivIC PF04977.15 ORF23234 - 0.37 10.6 6.2 0.6 9.9 6.1 1.5 1 1 0 1 1 1 0 Septum formation initiator Tir_receptor_N PF07490.11 ORF23094 - 0.46 10.3 3.4 0.43 10.4 0.3 2.0 1 1 1 2 2 2 0 Translocated intimin receptor (Tir) N-terminus Bim_N PF06773.11 ORF22847 - 0.077 12.7 0.2 0.13 12.0 0.2 1.4 1 0 0 1 1 1 0 Bim protein N-terminus V_ATPase_I PF01496.19 ORF22539 - 0.34 8.8 4.4 0.34 8.8 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family LAMTOR5 PF16672.5 ORF21974 - 0.043 13.8 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 Ribosomal_L27 PF01016.19 ORF21759 - 6.8e-39 131.8 3.4 7.5e-39 131.6 3.4 1.0 1 0 0 1 1 1 1 Ribosomal L27 protein PG_binding_2 PF08823.11 ORF21031 - 0.099 13.0 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Putative peptidoglycan binding domain DUF4171 PF13775.6 ORF21030 - 0.01 16.3 2.9 0.01 16.3 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4171) SPC25 PF06703.11 ORF20629 - 0.36 10.6 2.4 0.9 9.3 1.3 1.8 1 1 1 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF2544 PF11245.8 ORF20504 - 0.059 12.8 0.0 0.067 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2544) SLD5_C PF16922.5 ORF20126 - 0.12 12.6 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 DNA replication complex GINS protein SLD5 C-terminus LAMTOR5 PF16672.5 ORF19766 - 0.043 13.8 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 CDO_I PF05995.12 ORF19659 - 0.045 13.1 0.0 0.059 12.7 0.0 1.1 1 0 0 1 1 1 0 Cysteine dioxygenase type I ADH_N PF08240.12 ORF19452 - 0.003 17.4 0.0 0.0047 16.8 0.0 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 ORF19452 - 0.0084 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 N-terminal domain of oxidoreductase LRRNT PF01462.18 ORF19299 - 0.0077 15.9 1.2 0.014 15.0 1.2 1.4 1 0 0 1 1 1 1 Leucine rich repeat N-terminal domain SET PF00856.28 ORF18519 - 1.2e-09 38.7 0.0 1.3e-09 38.7 0.0 1.0 1 0 0 1 1 1 1 SET domain Dam PF05869.11 ORF18442 - 0.09 12.3 0.4 0.099 12.2 0.4 1.1 1 0 0 1 1 1 0 DNA N-6-adenine-methyltransferase (Dam) p450 PF00067.22 ORF1842 - 7.8e-09 34.8 0.0 8e-09 34.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 XTBD PF11952.8 ORF18026 - 0.012 15.4 0.0 0.018 14.8 0.0 1.2 1 0 0 1 1 1 0 XRN-Two Binding Domain, XTBD SKA2 PF16740.5 ORF17297 - 0.00062 19.5 3.5 0.00083 19.1 3.5 1.2 1 0 0 1 1 1 1 Spindle and kinetochore-associated protein 2 DUF5082 PF16888.5 ORF17297 - 0.0022 18.2 1.9 0.0027 18.0 1.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) BRE1 PF08647.11 ORF17297 - 0.0039 17.2 5.3 0.0046 17.0 5.3 1.3 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase RasGAP_C PF03836.15 ORF17297 - 0.0044 17.2 4.3 0.0055 16.9 4.3 1.1 1 0 0 1 1 1 1 RasGAP C-terminus Baculo_PEP_C PF04513.12 ORF17297 - 0.0056 16.7 1.6 0.0065 16.5 1.6 1.1 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus APG6_N PF17675.1 ORF17297 - 0.0077 16.8 2.7 0.0085 16.6 2.7 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region WXG100 PF06013.12 ORF17297 - 0.0097 16.1 2.1 0.049 13.9 0.5 2.2 2 1 0 2 2 2 1 Proteins of 100 residues with WXG DUF4763 PF15960.5 ORF17297 - 0.012 15.0 2.2 0.014 14.7 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Vps51 PF08700.11 ORF17297 - 0.018 15.1 2.9 0.075 13.1 2.9 1.9 1 1 0 1 1 1 0 Vps51/Vps67 DivIC PF04977.15 ORF17297 - 0.019 14.7 5.9 0.022 14.5 4.9 1.7 1 1 0 2 2 2 0 Septum formation initiator HALZ PF02183.18 ORF17297 - 0.023 14.9 2.3 0.046 13.9 2.3 1.5 1 0 0 1 1 1 0 Homeobox associated leucine zipper Tup_N PF08581.10 ORF17297 - 0.024 14.9 5.9 0.27 11.6 4.0 2.1 1 1 1 2 2 2 0 Tup N-terminal FmiP_Thoc5 PF09766.9 ORF17297 - 0.027 13.8 4.9 0.039 13.3 4.9 1.1 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 NPV_P10 PF05531.12 ORF17297 - 0.033 14.7 3.2 0.044 14.2 1.8 1.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Alpha_Helical PF18489.1 ORF17297 - 0.036 14.3 1.5 0.039 14.1 1.5 1.1 1 0 0 1 1 1 0 Alpha helical domain DUF3450 PF11932.8 ORF17297 - 0.042 13.2 2.5 0.043 13.1 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) bZIP_1 PF00170.21 ORF17297 - 0.055 13.6 8.5 0.082 13.0 8.5 1.2 1 0 0 1 1 1 0 bZIP transcription factor Prefoldin PF02996.17 ORF17297 - 0.064 13.2 4.8 0.071 13.0 3.8 1.6 2 0 0 2 2 2 0 Prefoldin subunit ZapB PF06005.12 ORF17297 - 0.067 13.6 6.2 0.11 12.9 6.2 1.4 1 0 0 1 1 1 0 Cell division protein ZapB Prominin PF05478.11 ORF17297 - 0.071 11.1 3.5 0.071 11.1 3.5 1.0 1 0 0 1 1 1 0 Prominin Spc24 PF08286.11 ORF17297 - 0.11 12.8 5.3 0.13 12.5 4.9 1.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 SlyX PF04102.12 ORF17297 - 0.12 13.0 2.6 0.14 12.8 1.9 1.6 1 1 0 1 1 1 0 SlyX PhageMin_Tail PF10145.9 ORF17297 - 0.16 11.8 3.2 0.39 10.6 3.2 1.6 1 1 0 1 1 1 0 Phage-related minor tail protein GrpE PF01025.19 ORF17297 - 0.23 11.1 7.2 0.21 11.2 5.9 1.5 1 1 0 2 2 2 0 GrpE TMF_DNA_bd PF12329.8 ORF17297 - 0.28 11.2 8.8 0.6 10.2 8.8 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding E1-E2_ATPase PF00122.20 ORF17087 - 5e-09 35.9 0.0 5.1e-09 35.9 0.0 1.1 1 0 0 1 1 1 1 E1-E2 ATPase TSP_1 PF00090.19 ORF15286 - 0.021 15.0 0.6 0.037 14.2 0.6 1.5 1 0 0 1 1 1 0 Thrombospondin type 1 domain DUF987 PF06174.11 ORF15284 - 0.17 11.8 1.2 0.25 11.3 0.1 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF987) UCR_TM PF02921.14 ORF1527 - 0.14 12.6 0.1 0.22 12.0 0.1 1.3 1 0 0 1 1 1 0 Ubiquinol cytochrome reductase transmembrane region Glyco_hydro_20 PF00728.22 ORF15093 - 0.091 12.1 0.0 0.098 12.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, catalytic domain AZUL PF16558.5 ORF14728 - 0.026 14.7 1.5 0.027 14.7 0.2 1.7 2 0 0 2 2 2 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A HTH_7 PF02796.15 ORF13755 - 7.7e-12 45.1 0.0 1.1e-11 44.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Resolvase PF00239.21 ORF13755 - 6.8e-06 26.2 1.2 1.3e-05 25.3 0.2 1.8 2 0 0 2 2 2 1 Resolvase, N terminal domain HTH_38 PF13936.6 ORF13755 - 1.6e-05 24.5 0.2 3.1e-05 23.6 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_28 PF13518.6 ORF13755 - 4.6e-05 23.5 0.1 9e-05 22.5 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF13755 - 0.00063 19.5 0.1 0.0011 18.7 0.1 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 ORF13755 - 0.0028 17.7 0.2 0.06 13.4 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix Sigma70_r4 PF04545.16 ORF13755 - 0.0086 15.6 0.1 0.016 14.7 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Tnp_ISL3 PF13542.6 ORF13755 - 0.019 14.4 0.1 0.037 13.5 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_11 PF08279.12 ORF13755 - 0.019 14.9 0.2 0.028 14.4 0.2 1.3 1 0 0 1 1 1 0 HTH domain Sigma70_r4_2 PF08281.12 ORF13755 - 0.055 13.2 0.2 0.11 12.2 0.2 1.6 1 1 0 1 1 1 0 Sigma-70, region 4 LysM PF01476.20 ORF13755 - 0.083 13.0 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 LysM domain Bot1p PF12298.8 ORF13755 - 0.09 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic mitochondrial regulator protein UPF0122 PF04297.14 ORF13755 - 0.095 12.9 0.0 0.16 12.2 0.0 1.4 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_36 PF13730.6 ORF13755 - 0.14 12.1 0.1 0.21 11.6 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain NPL4 PF05021.15 ORF13344 - 7.6e-07 28.8 0.0 5.4e-05 22.7 0.0 2.0 1 1 0 1 1 1 1 NPL4 family Thioredoxin_16 PF18569.1 ORF13182 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain FRG1 PF06229.12 ORF1301 - 0.029 14.1 0.2 0.031 14.0 0.2 1.0 1 0 0 1 1 1 0 FRG1-like domain Peptidase_M60 PF13402.6 ORF12796 - 0.075 12.5 0.0 0.076 12.5 0.0 1.1 1 0 0 1 1 1 0 Peptidase M60, enhancin and enhancin-like 4HBT_2 PF13279.6 ORF12796 - 0.11 13.0 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Thioesterase-like superfamily S-l_SbsC_C PF18316.1 ORF12796 - 0.12 12.9 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 S-layer protein SbsC C-terminal domain Ank_4 PF13637.6 ORF12642 - 0.00013 22.4 0.1 0.00039 20.9 0.1 1.8 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF12642 - 0.00022 21.5 0.1 0.041 14.3 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF12642 - 0.0004 20.9 0.0 0.00068 20.2 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF12642 - 0.0065 16.8 0.1 0.026 14.9 0.1 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF12642 - 0.02 15.4 0.2 4.4 8.2 0.1 3.1 3 1 0 3 3 3 0 Ankyrin repeat DUF2863 PF11062.8 ORF12642 - 0.094 11.1 0.0 0.1 11.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2863) zf-CCCH_4 PF18044.1 ORF11756 - 9.1e-15 54.1 12.1 2.4e-07 30.4 2.5 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger zf_CCCH_4 PF18345.1 ORF11756 - 2e-13 49.9 13.9 8.2e-07 28.9 2.3 2.2 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF11756 - 6e-13 48.3 10.5 2.7e-07 30.4 2.1 2.2 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF11756 - 1e-06 28.9 11.4 0.00028 21.3 1.7 2.5 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Torus PF16131.5 ORF11756 - 3.8e-06 27.6 6.7 0.0064 17.2 0.1 2.0 1 1 1 2 2 2 2 Torus domain CRAM_rpt PF07016.11 ORF11756 - 0.053 13.3 0.4 2.4 8.0 0.0 2.4 2 0 0 2 2 2 0 Cysteine-rich acidic integral membrane protein precursor zf-CCCH_3 PF15663.5 ORF11756 - 0.082 13.1 6.7 3.1 8.1 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger containing family zf_CCCH_5 PF18384.1 ORF11756 - 0.21 11.8 4.8 1.4 9.1 1.5 2.4 2 1 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) oligo_HPY PF08352.12 ORF11756 - 1.5 9.4 6.2 17 6.0 0.2 2.1 2 0 0 2 2 2 0 Oligopeptide/dipeptide transporter, C-terminal region DUF2389 PF09493.10 ORF112530 - 0.18 12.5 0.0 0.29 11.8 0.0 1.4 1 0 0 1 1 1 0 Tryptophan-rich protein (DUF2389) LAMTOR5 PF16672.5 ORF111405 - 0.043 13.8 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 ketoacyl-synt PF00109.26 ORF111194 - 0.085 12.4 1.0 0.092 12.3 1.0 1.4 1 1 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain DegT_DnrJ_EryC1 PF01041.17 ORF111000 - 0.00024 20.5 0.0 0.00025 20.5 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Thioredoxin_16 PF18569.1 ORF110662 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain SYS1 PF09801.9 ORF110625 - 8.4e-21 74.6 0.5 9.2e-21 74.5 0.5 1.0 1 0 0 1 1 1 1 Integral membrane protein S linking to the trans Golgi network Coq4 PF05019.13 ORF110625 - 0.081 12.2 0.1 0.092 12.1 0.1 1.1 1 0 0 1 1 1 0 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 Nop14 PF04147.12 ORF109718 - 0.68 8.1 2.7 0.69 8.0 2.7 1.0 1 0 0 1 1 1 0 Nop14-like family Myosin_TH1 PF06017.13 ORF109549 - 1.3e-11 44.5 0.6 1.4e-11 44.4 0.6 1.1 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding Cytomega_gL PF01801.16 ORF10949 - 0.074 12.4 1.6 0.11 11.9 1.6 1.2 1 0 0 1 1 1 0 Cytomegalovirus glycoprotein L Nefa_Nip30_N PF10187.9 ORF109242 - 0.073 13.4 0.1 0.09 13.1 0.1 1.1 1 0 0 1 1 1 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 Tmemb_161AB PF10268.9 ORF108440 - 0.035 12.8 0.1 0.035 12.8 0.1 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB Thioredoxin_16 PF18569.1 ORF108303 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain Baculo_LEF5 PF04838.12 ORF107729 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF107729 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family DUF4682 PF15733.5 ORF107367 - 0.014 16.0 0.9 0.015 15.9 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4682) Herpes_UL69 PF05459.12 ORF107214 - 0.0081 15.5 0.3 0.01 15.2 0.3 1.2 1 0 0 1 1 1 1 Herpesvirus transcriptional regulator family tRNA-synt_1c_C PF03950.18 ORF106639 - 0.046 13.6 1.3 0.049 13.5 1.3 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), anti-codon binding domain Polysacc_syn_2C PF08485.10 ORF106604 - 0.025 14.2 0.9 1.4 8.6 0.0 2.3 1 1 1 2 2 2 0 Polysaccharide biosynthesis protein C-terminal DUF1611 PF07755.11 ORF106604 - 0.065 12.5 0.0 0.074 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain IATP PF04568.12 ORF106544 - 0.8 10.2 3.3 1.3 9.5 3.3 1.4 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP DUF1447 PF07288.11 ORF10529 - 0.073 13.1 0.0 0.098 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1447) ZT_dimer PF16916.5 ORF104855 - 0.0016 18.5 2.4 0.0025 17.9 2.4 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter DUF3343 PF11823.8 ORF104364 - 5.5e-11 41.8 0.0 6.8e-11 41.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3343) PEX11 PF05648.14 ORF103891 - 0.094 12.2 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 Peroxisomal biogenesis factor 11 (PEX11) HAV_VP PF12944.7 ORF103891 - 0.12 12.4 0.0 0.19 11.7 0.0 1.4 1 1 0 1 1 1 0 Hepatitis A virus viral protein VP Sugar_tr PF00083.24 ORF103403 - 3e-07 29.7 0.0 3.2e-07 29.6 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter FNIP_C PF14638.6 ORF103403 - 0.17 11.5 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Folliculin-interacting protein C-terminus Nucleoporin_FG2 PF15967.5 ORF10301 - 0.0016 17.1 0.4 0.0019 16.8 0.4 1.0 1 0 0 1 1 1 1 Nucleoporin FG repeated region Baculo_LEF5 PF04838.12 ORF102099 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF102099 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Asp PF00026.23 ORF101927 - 9.3e-07 28.6 0.0 1e-06 28.4 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF101927 - 5.9e-05 22.9 0.0 6.9e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Baculo_LEF5 PF04838.12 ORF101525 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF101525 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family NAAA-beta PF15508.6 ORF100653 - 1.6e-05 25.1 0.1 2.5e-05 24.5 0.1 1.3 1 0 0 1 1 1 1 beta subunit of N-acylethanolamine-hydrolyzing acid amidase Mod_r PF07200.13 ORF100408 - 0.0021 18.2 5.7 0.0025 18.0 5.7 1.0 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein FlaC_arch PF05377.11 ORF100408 - 0.0028 18.0 4.6 0.063 13.7 4.6 2.2 1 1 0 1 1 1 1 Flagella accessory protein C (FlaC) UPF0228 PF05727.11 ORF100408 - 0.0074 16.1 1.9 0.009 15.8 1.9 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) DUF1664 PF07889.12 ORF100408 - 0.029 14.4 3.9 0.031 14.3 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 ORF100408 - 0.057 13.5 5.2 0.7 10.0 0.0 2.3 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 Zw10 PF06248.13 NODE_64469_length_250_cov_0.893023_g56528_i0reverse_frame_1 - 0.043 12.4 0.0 0.049 12.2 0.0 1.0 1 0 0 1 1 1 0 Centromere/kinetochore Zw10 Helicase_C PF00271.31 NODE_64468_length_250_cov_0.911628_g56527_i0reverse_frame_1 - 8.8e-12 45.4 0.0 9.5e-12 45.2 0.0 1.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain FA_hydroxylase PF04116.13 NODE_64468_length_250_cov_0.911628_g56527_i0forward_frame_1 - 0.012 15.9 0.2 0.015 15.7 0.2 1.1 1 0 0 1 1 1 0 Fatty acid hydroxylase superfamily TMEM52 PF14979.6 NODE_64467_length_250_cov_0.916279_g56526_i0reverse_frame_1 - 0.37 10.7 5.8 0.7 9.8 3.3 2.0 1 1 1 2 2 2 0 Transmembrane 52 zf_CCCH_4 PF18345.1 NODE_64467_length_250_cov_0.916279_g56526_i0forward_frame_1 - 0.13 12.3 0.4 14 5.9 0.0 2.4 2 0 0 2 2 2 0 Zinc finger domain LRR_4 PF12799.7 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_1 - 0.0001 22.6 0.5 0.00015 22.1 0.5 1.2 1 0 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_1 - 0.0024 18.2 0.2 1.6 9.5 0.0 2.3 2 0 0 2 2 2 2 Leucine Rich Repeat LRR_8 PF13855.6 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_1 - 0.0047 16.7 0.1 0.0066 16.2 0.1 1.2 1 0 0 1 1 1 1 Leucine rich repeat LRR_6 PF13516.6 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_1 - 0.044 13.9 0.9 0.69 10.1 0.2 2.3 2 0 0 2 2 2 0 Leucine Rich repeat Gly_reductase PF09338.11 NODE_64462_length_250_cov_1.046512_g56521_i0forward_frame_1 - 0.24 9.7 0.2 0.26 9.6 0.2 1.0 1 0 0 1 1 1 0 Glycine/sarcosine/betaine reductase component B subunits DUF3018 PF11455.8 NODE_64446_length_250_cov_1.181395_g56505_i0forward_frame_1 - 0.11 12.5 0.9 0.4 10.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3018) zn-ribbon_14 PF16503.5 NODE_64445_length_250_cov_1.223256_g56504_i0forward_frame_1 - 1.1 8.8 0.1 1.1 8.8 0.1 3.0 3 0 0 3 3 3 0 Zinc-ribbon RabGAP-TBC PF00566.18 NODE_64438_length_250_cov_1.302326_g56497_i0reverse_frame_1 - 8.6e-09 35.4 1.9 9.5e-09 35.2 1.9 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain T4SS-DNA_transf PF02534.14 NODE_64438_length_250_cov_1.302326_g56497_i0forward_frame_1 - 0.047 12.5 0.0 0.049 12.4 0.0 1.0 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer GSH_synth_ATP PF03917.17 NODE_64437_length_250_cov_1.325581_g56496_i0forward_frame_1 - 0.005 15.7 0.0 0.0055 15.5 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain ArgoL1 PF08699.10 NODE_64432_length_250_cov_1.376744_g56491_i0forward_frame_1 - 0.13 12.0 1.0 0.39 10.4 0.6 2.2 1 1 1 2 2 2 0 Argonaute linker 1 domain NodS PF05401.11 NODE_64431_length_250_cov_1.395349_g56490_i0reverse_frame_1 - 0.091 12.4 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) Rdx PF10262.9 NODE_64431_length_250_cov_1.395349_g56490_i0forward_frame_1 - 0.049 13.8 0.1 0.07 13.3 0.1 1.3 1 0 0 1 1 1 0 Rdx family YesK PF14150.6 NODE_64431_length_250_cov_1.395349_g56490_i0forward_frame_1 - 0.37 11.0 7.8 0.34 11.1 6.0 1.7 1 1 1 2 2 2 0 YesK-like protein TMIE PF16038.5 NODE_64426_length_250_cov_1.502326_g56485_i0forward_frame_1 - 0.43 10.4 2.0 0.59 10.0 2.0 1.2 1 0 0 1 1 1 0 TMIE protein DUF2518 PF10726.9 NODE_64418_length_250_cov_1.576744_g56477_i0forward_frame_1 - 1.7 8.3 7.0 1.9 8.1 7.0 1.2 1 0 0 1 1 1 0 Protein of function (DUF2518) Pertussis_S2S3 PF02918.15 NODE_64398_length_250_cov_1.846512_g56457_i0reverse_frame_1 - 0.13 12.2 0.0 0.15 12.0 0.0 1.3 1 1 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain DUF4548 PF15081.6 NODE_64392_length_250_cov_1.972093_g56451_i0forward_frame_1 - 0.03 14.1 0.2 0.034 14.0 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4548) Acetyltransf_2 PF00797.17 NODE_64385_length_250_cov_2.130233_g56444_i0reverse_frame_1 - 5.3e-33 114.8 0.0 5.7e-33 114.7 0.0 1.0 1 0 0 1 1 1 1 N-acetyltransferase Transglut_core PF01841.19 NODE_64385_length_250_cov_2.130233_g56444_i0reverse_frame_1 - 0.11 13.0 0.0 0.13 12.8 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily Pkinase PF00069.25 NODE_64382_length_250_cov_2.241860_g56441_i0forward_frame_1 - 6.5e-09 35.5 0.1 6.8e-09 35.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_64382_length_250_cov_2.241860_g56441_i0forward_frame_1 - 4.3e-07 29.5 0.0 4.5e-07 29.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Toxin_12 PF07740.12 NODE_64377_length_250_cov_2.344186_g56436_i0reverse_frame_1 - 0.44 11.3 8.9 0.84 10.4 8.9 1.5 1 0 0 1 1 1 0 Ion channel inhibitory toxin CLN3 PF02487.17 NODE_64373_length_250_cov_2.483721_g56432_i0reverse_frame_1 - 0.0067 15.5 0.2 0.0077 15.3 0.2 1.1 1 0 0 1 1 1 1 CLN3 protein MIF4G PF02854.19 NODE_64369_length_250_cov_2.530233_g56428_i0reverse_frame_1 - 6.9e-06 25.9 0.5 7.1e-06 25.8 0.5 1.0 1 0 0 1 1 1 1 MIF4G domain zf-BED PF02892.15 NODE_64368_length_250_cov_2.548837_g56427_i0reverse_frame_1 - 0.4 10.7 7.6 2.4 8.2 1.4 2.5 1 1 1 2 2 2 0 BED zinc finger DUF19 PF01579.18 NODE_64366_length_250_cov_2.632558_g56425_i0reverse_frame_1 - 0.0047 16.7 1.8 0.0057 16.5 1.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF19) Cas_Csn2 PF09711.10 NODE_64364_length_250_cov_2.702326_g56423_i0reverse_frame_1 - 0.095 12.4 3.1 4.4 6.9 1.8 2.1 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_Csn2) DUF535 PF04393.13 NODE_64363_length_250_cov_2.758140_g56422_i0forward_frame_1 - 2.1e-18 66.6 0.1 2.4e-18 66.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF535) Branch_AA_trans PF05525.13 NODE_64359_length_250_cov_2.879070_g56418_i0reverse_frame_1 - 0.004 16.1 0.3 0.004 16.1 0.3 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport protein FMN_bind PF04205.14 NODE_64349_length_250_cov_3.306977_g56408_i0forward_frame_1 - 0.59 10.7 4.0 1.2 9.8 0.9 2.2 2 0 0 2 2 2 0 FMN-binding domain NPCC PF08058.11 NODE_64346_length_250_cov_3.572093_g56405_i0forward_frame_1 - 0.7 9.9 6.8 0.85 9.7 6.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component UPF0561 PF10573.9 NODE_64341_length_250_cov_7.893023_g56400_i0forward_frame_1 - 0.071 13.2 0.1 0.09 12.9 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 LuxT_C PF18285.1 NODE_64325_length_250_cov_44.497674_g56384_i0reverse_frame_1 - 0.074 13.6 0.1 0.1 13.2 0.1 1.2 1 0 0 1 1 1 0 Tetracycline repressor LuxT C-terminal domain TFIIF_alpha PF05793.12 NODE_64318_length_250_cov_56.595349_g56377_i0reverse_frame_1 - 0.16 10.5 2.0 0.15 10.6 2.0 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) MORN PF02493.20 NODE_64315_length_250_cov_61.706977_g56374_i0reverse_frame_1 - 2.4e-07 30.2 1.0 4.1e-06 26.4 0.1 2.3 2 0 0 2 2 2 2 MORN repeat DUF3136 PF11334.8 NODE_64313_length_250_cov_68.655814_g56372_i0reverse_frame_1 - 0.11 12.3 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) GPDPase_memb PF10110.9 NODE_64312_length_250_cov_69.613953_g56371_i0forward_frame_1 - 0.013 14.3 2.0 0.015 14.1 2.0 1.0 1 0 0 1 1 1 0 Membrane domain of glycerophosphoryl diester phosphodiesterase UTP25 PF06862.12 NODE_64305_length_250_cov_81.525581_g56364_i0reverse_frame_1 - 4e-05 22.6 0.0 4.3e-05 22.5 0.0 1.0 1 0 0 1 1 1 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 Mga PF05043.13 NODE_64298_length_250_cov_97.953488_g56357_i0forward_frame_1 - 0.0037 17.8 3.6 0.21 12.2 1.3 2.1 1 1 1 2 2 2 2 Mga helix-turn-helix domain EVI2A PF05399.11 NODE_64296_length_250_cov_103.320930_g56355_i0reverse_frame_1 - 0.016 14.8 0.8 0.018 14.7 0.8 1.0 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) RNA_pol_Rpb1_1 PF04997.12 NODE_64291_length_250_cov_127.916279_g56350_i0forward_frame_1 - 2.1e-08 33.9 0.2 2.4e-08 33.7 0.2 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 Prominin PF05478.11 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 0.059 11.3 4.0 0.064 11.2 4.0 1.0 1 0 0 1 1 1 0 Prominin Presenilin PF01080.17 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 0.21 10.3 1.9 0.24 10.1 1.9 1.0 1 0 0 1 1 1 0 Presenilin Branch_AA_trans PF05525.13 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 0.57 9.0 9.0 0.64 8.8 9.0 1.0 1 0 0 1 1 1 0 Branched-chain amino acid transport protein YebO PF13974.6 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 0.77 9.9 2.9 1.3 9.1 2.9 1.3 1 0 0 1 1 1 0 YebO-like protein 2TM PF13239.6 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 4.7 7.6 10.3 0.086 13.2 3.3 1.6 2 0 0 2 2 2 0 2TM domain FixS PF03597.15 NODE_64280_length_250_cov_559.274419_g56339_i0forward_frame_1 - 0.052 13.3 0.0 0.081 12.7 0.0 1.3 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type HIG_1_N PF04588.13 NODE_64280_length_250_cov_559.274419_g56339_i0forward_frame_1 - 0.083 13.1 0.0 0.091 13.0 0.0 1.3 1 0 0 1 1 1 0 Hypoxia induced protein conserved region 7TM_GPCR_Srd PF10317.9 NODE_64280_length_250_cov_559.274419_g56339_i0forward_frame_1 - 0.1 11.8 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd DUF3976 PF13121.6 NODE_64280_length_250_cov_559.274419_g56339_i0forward_frame_1 - 0.12 12.5 1.6 0.22 11.7 1.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3976) Cytochrom_c3_2 PF14537.6 NODE_64275_length_251_cov_0.800926_g56334_i0reverse_frame_1 - 0.0053 17.2 0.8 0.0088 16.5 0.8 1.3 1 0 0 1 1 1 1 Cytochrome c3 Ribosomal_L23eN PF03939.13 NODE_64272_length_251_cov_0.921296_g56331_i0reverse_frame_1 - 0.3 11.3 1.2 0.82 9.9 0.1 2.0 2 0 0 2 2 2 0 Ribosomal protein L23, N-terminal domain DUF5408 PF17402.2 NODE_64272_length_251_cov_0.921296_g56331_i0forward_frame_1 - 0.54 10.2 2.4 0.79 9.7 2.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5408) RdRP_2 PF00978.21 NODE_64265_length_251_cov_1.097222_g56324_i0reverse_frame_1 - 0.061 12.2 0.1 0.061 12.2 0.1 1.0 1 0 0 1 1 1 0 RNA dependent RNA polymerase BTG PF07742.12 NODE_64264_length_251_cov_1.101852_g56323_i0reverse_frame_1 - 0.071 13.0 0.0 0.079 12.8 0.0 1.1 1 0 0 1 1 1 0 BTG family Secapin PF17521.2 NODE_64252_length_251_cov_1.268519_g56311_i0forward_frame_1 - 0.027 14.3 0.2 0.049 13.4 0.2 1.4 1 0 0 1 1 1 0 Honey bee peptides S-antigen PF05756.11 NODE_64251_length_251_cov_1.268519_g56310_i0reverse_frame_1 - 0.0028 18.0 0.2 0.0033 17.8 0.2 1.1 1 0 0 1 1 1 1 S-antigen protein DUF1494 PF07379.11 NODE_64243_length_251_cov_1.365741_g56302_i0forward_frame_1 - 0.014 15.3 0.0 0.016 15.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1494) Protoglobin PF11563.8 NODE_64241_length_251_cov_1.393519_g56300_i0forward_frame_1 - 0.033 14.1 0.9 0.035 14.0 0.9 1.0 1 0 0 1 1 1 0 Protoglobin Transcrip_act PF04949.13 NODE_64226_length_251_cov_1.592593_g56285_i0forward_frame_1 - 0.041 13.8 0.2 0.049 13.5 0.2 1.1 1 0 0 1 1 1 0 Transcriptional activator Tugs PF17840.1 NODE_64223_length_251_cov_1.601852_g56282_i0forward_frame_1 - 0.017 15.3 0.1 0.073 13.3 0.0 1.9 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain Cutinase PF01083.22 NODE_64223_length_251_cov_1.601852_g56282_i0forward_frame_1 - 0.081 12.9 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 Cutinase Chor_lyase PF04345.13 NODE_64217_length_251_cov_1.634259_g56276_i0reverse_frame_1 - 0.099 12.3 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Chorismate lyase TRIQK PF15168.6 NODE_64216_length_251_cov_1.638889_g56275_i0forward_frame_1 - 0.07 13.0 0.0 0.099 12.5 0.0 1.2 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family Dynamin_N PF00350.23 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 2.5e-20 73.2 0.0 2.8e-20 73.0 0.0 1.0 1 0 0 1 1 1 1 Dynamin family AAA_15 PF13175.6 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.00091 19.0 0.0 0.0011 18.8 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.0016 18.5 0.0 0.0017 18.4 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_21 PF13304.6 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.0042 16.9 0.1 0.005 16.7 0.1 1.3 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Roc PF08477.13 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.04 14.1 0.0 0.046 13.9 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_29 PF13555.6 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.048 13.4 0.0 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.076 13.2 0.0 0.076 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.12 11.8 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain FtsK_SpoIIIE PF01580.18 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.15 11.4 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family Hum_adeno_E3A PF05393.11 NODE_64197_length_251_cov_1.944444_g56256_i0reverse_frame_1 - 0.18 11.8 0.0 0.23 11.5 0.0 1.1 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein DUF5090 PF17009.5 NODE_64193_length_251_cov_2.023148_g56252_i0reverse_frame_1 - 0.025 14.5 0.9 0.03 14.3 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) PetL PF05115.14 NODE_64192_length_251_cov_2.032407_g56251_i0forward_frame_1 - 0.12 12.4 0.2 0.2 11.7 0.2 1.3 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) TMEM132D_C PF15706.5 NODE_64179_length_251_cov_2.375000_g56238_i0reverse_frame_1 - 8.9 6.2 6.2 15 5.4 6.2 1.4 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term AIF-MLS PF14962.6 NODE_64172_length_251_cov_2.555556_g56231_i0forward_frame_1 - 0.089 12.8 3.7 0.059 13.3 2.4 1.4 1 1 0 1 1 1 0 Mitochondria Localisation Sequence ERbeta_N PF12497.8 NODE_64167_length_251_cov_2.638889_g56226_i0reverse_frame_1 - 0.092 12.5 0.1 0.1 12.4 0.1 1.2 1 0 0 1 1 1 0 Estrogen receptor beta KIAA1430 PF13879.6 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.0021 18.8 8.4 0.0028 18.4 8.4 1.2 1 0 0 1 1 1 1 KIAA1430 homologue DUF4200 PF13863.6 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.024 15.0 6.2 0.044 14.2 6.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) GAS PF13851.6 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.032 13.6 10.7 0.039 13.3 10.7 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding HALZ PF02183.18 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.1 12.9 1.8 0.1 12.9 1.8 2.8 1 1 2 3 3 3 0 Homeobox associated leucine zipper Ly49 PF08391.10 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.31 11.4 5.9 0.34 11.3 5.9 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region UPF0242 PF06785.11 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.39 10.8 8.0 0.51 10.4 8.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus NYD-SP28_assoc PF14775.6 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 9.5 6.4 9.1 37 4.5 7.9 2.1 1 1 1 2 2 2 0 Sperm tail C-terminal domain Prominin PF05478.11 NODE_64142_length_251_cov_4.449074_g56201_i0reverse_frame_1 - 0.09 10.7 0.0 0.093 10.7 0.0 1.1 1 0 0 1 1 1 0 Prominin UPF0258 PF06789.12 NODE_64137_length_251_cov_11.856481_g56196_i0reverse_frame_1 - 2.3 8.3 4.3 2.9 8.0 4.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0258) SSP160 PF06933.11 NODE_64137_length_251_cov_11.856481_g56196_i0forward_frame_1 - 0.72 8.0 17.1 0.75 7.9 17.1 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Mucin PF01456.17 NODE_64137_length_251_cov_11.856481_g56196_i0forward_frame_1 - 6.9 6.6 20.7 9 6.3 20.7 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein zf-RING_2 PF13639.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 7e-15 55.1 5.2 9.1e-15 54.7 5.2 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 1.4e-10 40.7 3.1 2.4e-10 40.0 3.1 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 1e-09 38.1 3.9 1.7e-09 37.4 3.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 4.5e-09 36.0 5.6 7e-09 35.4 5.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 1.4e-08 34.7 3.1 2.3e-08 34.0 3.1 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 6.7e-08 32.4 5.7 9.7e-08 31.9 5.7 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 6.9e-08 32.7 7.3 2.7e-07 30.7 7.3 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 1.3e-07 31.4 4.4 1.7e-07 31.0 4.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 2.1e-07 30.8 3.9 3.7e-07 30.1 3.9 1.5 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 5.8e-07 29.3 6.8 2.5e-06 27.2 6.8 1.8 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 3.9e-06 26.9 6.4 2.3e-05 24.5 6.4 2.0 1 1 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 4.4e-06 26.2 3.5 7.9e-06 25.4 3.5 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 5.1e-06 26.3 5.3 2.2e-05 24.3 0.8 2.1 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 RINGv PF12906.7 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 6.4e-05 23.0 6.3 9.6e-05 22.4 6.3 1.3 1 0 0 1 1 1 1 RING-variant domain PHD PF00628.29 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.00014 21.6 4.4 0.00023 21.0 4.4 1.3 1 0 0 1 1 1 1 PHD-finger zf-RING_4 PF14570.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0004 20.1 3.8 0.00052 19.7 3.8 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0009 19.5 7.2 0.0018 18.5 7.2 1.6 1 1 0 1 1 1 1 RING-like domain Zf_RING PF16744.5 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0015 18.6 0.9 0.0015 18.6 0.9 1.9 1 1 1 2 2 2 1 KIAA1045 RING finger zf-UDP PF14569.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0025 17.9 1.0 0.0035 17.4 1.0 1.2 1 0 0 1 1 1 1 Zinc-binding RING-finger C1_1 PF00130.22 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0027 17.5 6.0 0.02 14.8 2.3 2.1 1 1 1 2 2 2 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-Nse PF11789.8 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0059 16.4 1.6 0.0099 15.7 1.6 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0089 16.2 1.4 0.023 14.8 1.4 1.7 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_9 PF13901.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.016 15.2 4.2 0.021 14.8 4.2 1.2 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zinc_ribbon_15 PF17032.5 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.017 15.8 3.2 0.029 15.1 3.2 1.3 1 0 0 1 1 1 0 zinc-ribbon family zf-RING_6 PF14835.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.022 14.6 1.2 0.032 14.1 1.2 1.3 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-HC5HC2H_2 PF13832.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.061 13.5 1.1 0.061 13.5 1.1 1.9 1 1 1 2 2 2 0 PHD-zinc-finger like domain OrfB_Zn_ribbon PF07282.11 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.074 13.0 5.1 0.22 11.5 0.4 2.2 1 1 1 2 2 2 0 Putative transposase DNA-binding domain PglZ PF08665.12 NODE_64131_length_251_cov_42.500000_g56190_i0reverse_frame_1 - 0.095 12.8 2.3 0.11 12.6 2.3 1.0 1 0 0 1 1 1 0 PglZ domain PhnG PF06754.12 NODE_64131_length_251_cov_42.500000_g56190_i0reverse_frame_1 - 0.22 11.5 3.3 0.3 11.0 3.3 1.2 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG HalX PF08663.10 NODE_64131_length_251_cov_42.500000_g56190_i0reverse_frame_1 - 0.52 10.7 8.5 1.6 9.1 1.6 2.2 1 1 1 2 2 2 0 HalX domain CCDC106 PF15794.5 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_1 - 0.35 10.5 35.8 0.48 10.1 35.8 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 TFIIF_alpha PF05793.12 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_1 - 1.2 7.6 38.6 1.4 7.4 38.6 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) SR-25 PF10500.9 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_1 - 2.6 7.6 60.9 4.2 6.9 60.9 1.4 1 1 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3807 PF12720.7 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_1 - 6.7 6.9 30.7 7.9 6.7 30.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Rtf2 PF04641.12 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_1 - 7.7 5.8 35.5 9.5 5.5 35.5 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger DUF1746 PF08508.10 NODE_64130_length_251_cov_44.291667_g56189_i0forward_frame_1 - 0.17 12.2 5.5 0.2 12.0 5.5 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1746) Bap31 PF05529.12 NODE_64128_length_251_cov_47.023148_g56187_i0forward_frame_1 - 0.034 14.0 0.1 0.041 13.7 0.1 1.1 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region DUF4852 PF16144.5 NODE_64127_length_251_cov_47.828704_g56186_i0forward_frame_1 - 0.18 12.0 3.8 0.21 11.7 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4852) Fungal_TACC PF12709.7 NODE_64124_length_251_cov_49.083333_g56183_i0reverse_frame_1 - 0.028 14.8 2.6 0.079 13.4 0.9 2.2 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins KSHV_K1 PF11049.8 NODE_64120_length_251_cov_55.402778_g56179_i0reverse_frame_1 - 0.0026 17.7 1.1 0.029 14.3 0.1 2.0 1 1 1 2 2 2 2 Glycoprotein K1 of Kaposi's sarcoma-associated herpes virus DUF4131 PF13567.6 NODE_64111_length_251_cov_62.958333_g56170_i0forward_frame_1 - 0.13 11.9 2.5 0.15 11.7 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) PhoR PF11808.8 NODE_64111_length_251_cov_62.958333_g56170_i0forward_frame_1 - 3.4 8.1 9.9 1.2 9.6 3.3 2.1 1 1 1 2 2 2 0 Phosphate regulon sensor protein PhoR YihI PF04220.12 NODE_64108_length_251_cov_68.888889_g56167_i0reverse_frame_1 - 0.3 10.8 8.7 0.38 10.4 8.7 1.2 1 0 0 1 1 1 0 Der GTPase activator (YihI) F-box-like PF12937.7 NODE_64102_length_251_cov_80.810185_g56161_i0forward_frame_1 - 0.046 13.6 0.5 0.061 13.2 0.5 1.2 1 0 0 1 1 1 0 F-box-like Tropomyosin_1 PF12718.7 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.0001 22.5 4.2 0.00012 22.2 4.2 1.1 1 0 0 1 1 1 1 Tropomyosin like FAM76 PF16046.5 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.0046 16.3 1.6 0.0048 16.3 1.6 1.0 1 0 0 1 1 1 1 FAM76 protein ERM PF00769.19 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.0068 16.2 1.6 0.0078 16.1 1.6 1.0 1 0 0 1 1 1 1 Ezrin/radixin/moesin family DUF4094 PF13334.6 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.0098 16.3 1.5 0.013 15.9 1.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4094) Csm1_N PF18504.1 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.031 14.6 4.3 2.7 8.4 0.1 2.3 1 1 1 2 2 2 0 Csm1 N-terminal domain XhlA PF10779.9 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.048 13.9 3.1 0.062 13.5 2.6 1.4 1 1 0 1 1 1 0 Haemolysin XhlA DUF4407 PF14362.6 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.099 12.0 2.3 0.11 11.8 2.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Atg14 PF10186.9 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.17 10.9 3.5 0.18 10.8 3.5 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMPIT PF07851.13 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.46 9.7 2.2 0.47 9.6 2.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein Ank_2 PF12796.7 NODE_64077_length_251_cov_225.069444_g56136_i0reverse_frame_1 - 0.0041 17.7 0.0 0.0055 17.3 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_64077_length_251_cov_225.069444_g56136_i0reverse_frame_1 - 0.01 16.2 0.0 0.015 15.6 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_64077_length_251_cov_225.069444_g56136_i0reverse_frame_1 - 0.014 15.9 0.0 0.024 15.2 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) DUF4668 PF15701.5 NODE_64075_length_251_cov_319.879630_g56134_i0forward_frame_1 - 0.3 10.9 8.3 0.37 10.6 8.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) Peptidase_U4 PF03419.13 NODE_64075_length_251_cov_319.879630_g56134_i0forward_frame_1 - 0.34 10.2 6.5 0.39 10.0 6.5 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA TMIE PF16038.5 NODE_64075_length_251_cov_319.879630_g56134_i0forward_frame_1 - 2.1 8.2 7.7 0.29 11.0 1.3 2.0 1 1 1 2 2 2 0 TMIE protein Claudin_2 PF13903.6 NODE_64075_length_251_cov_319.879630_g56134_i0forward_frame_1 - 9.9 5.9 10.4 25 4.6 10.4 1.5 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction T2SSE_N PF05157.15 NODE_64067_length_252_cov_0.806452_g56126_i0forward_frame_1 - 7.9e-06 26.1 0.0 8.8e-06 25.9 0.0 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein E, N-terminal domain Maelstrom PF13017.6 NODE_64063_length_252_cov_1.000000_g56122_i0forward_frame_1 - 0.1 12.2 1.8 0.12 12.1 1.8 1.0 1 0 0 1 1 1 0 piRNA pathway germ-plasm component DUF1298 PF06974.13 NODE_64051_length_252_cov_1.193548_g56110_i0forward_frame_1 - 2.8e-12 46.8 0.0 2.9e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) DCB PF16213.5 NODE_64044_length_252_cov_1.327189_g56103_i0forward_frame_1 - 0.059 13.0 0.1 0.075 12.7 0.1 1.1 1 0 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 LIP PF03583.14 NODE_64040_length_252_cov_1.364055_g56099_i0forward_frame_1 - 0.044 13.1 0.1 0.05 12.9 0.1 1.0 1 0 0 1 1 1 0 Secretory lipase Tnp_P_element_C PF12596.8 NODE_64039_length_252_cov_1.377880_g56098_i0reverse_frame_1 - 0.036 14.6 0.0 0.037 14.6 0.0 1.1 1 0 0 1 1 1 0 87kDa Transposase HrpB2 PF09487.10 NODE_64039_length_252_cov_1.377880_g56098_i0reverse_frame_1 - 0.059 13.8 1.1 0.07 13.6 1.1 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB2) DUF412 PF04217.13 NODE_64038_length_252_cov_1.382488_g56097_i0reverse_frame_1 - 0.044 13.7 0.1 0.047 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF412 N_Asn_amidohyd PF14736.6 NODE_64037_length_252_cov_1.396313_g56096_i0reverse_frame_1 - 0.61 9.2 1.8 0.77 8.9 1.8 1.1 1 0 0 1 1 1 0 Protein N-terminal asparagine amidohydrolase DUF3395 PF11875.8 NODE_64034_length_252_cov_1.428571_g56093_i0reverse_frame_1 - 0.098 12.5 4.3 0.11 12.4 4.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3395) DUF2492 PF10678.9 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_1 - 0.12 12.6 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) Actin PF00022.19 NODE_64020_length_252_cov_1.608295_g56079_i0forward_frame_1 - 1e-06 27.7 0.0 1.1e-06 27.5 0.0 1.0 1 0 0 1 1 1 1 Actin Urate_ox_N PF06181.11 NODE_64012_length_252_cov_1.741935_g56071_i0reverse_frame_1 - 0.07 12.5 0.2 0.068 12.5 0.2 1.0 1 0 0 1 1 1 0 Urate oxidase N-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks285.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks285.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks285.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks285.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:12:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Tropomodulin PF03250.14 NODE_64008_length_252_cov_1.778802_g56067_i0reverse_frame_1 - 0.023 14.8 0.0 0.033 14.2 0.0 1.2 1 0 0 1 1 1 0 Tropomodulin Lamprin PF06403.11 NODE_64007_length_252_cov_1.783410_g56066_i0reverse_frame_1 - 4.5 7.2 7.3 6.6 6.7 7.3 1.3 1 1 0 1 1 1 0 Lamprin Pkinase_Tyr PF07714.17 NODE_64005_length_252_cov_1.806452_g56064_i0reverse_frame_1 - 2.7e-09 36.7 0.3 3e-09 36.5 0.3 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_64005_length_252_cov_1.806452_g56064_i0reverse_frame_1 - 5.5e-09 35.8 0.3 5.8e-09 35.7 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain HisKA_2 PF07568.12 NODE_63996_length_252_cov_1.870968_g56055_i0forward_frame_1 - 0.049 13.7 0.3 0.08 13.0 0.3 1.3 1 0 0 1 1 1 0 Histidine kinase DUF2704 PF10866.8 NODE_63996_length_252_cov_1.870968_g56055_i0forward_frame_1 - 0.074 12.9 0.5 0.085 12.7 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2704) DUF1296 PF06972.11 NODE_63996_length_252_cov_1.870968_g56055_i0forward_frame_1 - 0.11 12.7 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1296) Prenyltrans PF00432.21 NODE_63982_length_252_cov_2.110599_g56041_i0reverse_frame_1 - 0.4 10.5 1.9 0.6 9.9 1.9 1.3 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat NCD3G PF07562.14 NODE_63978_length_252_cov_2.216590_g56037_i0reverse_frame_1 - 0.011 15.7 0.3 0.017 15.1 0.3 1.3 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR E1-E2_ATPase PF00122.20 NODE_63975_length_252_cov_2.308756_g56034_i0reverse_frame_1 - 0.18 11.3 0.3 0.21 11.1 0.3 1.1 1 0 0 1 1 1 0 E1-E2 ATPase YmaF PF12788.7 NODE_63975_length_252_cov_2.308756_g56034_i0forward_frame_1 - 0.016 15.7 0.7 0.016 15.7 0.7 1.1 1 0 0 1 1 1 0 YmaF family DUF5579 PF17742.1 NODE_63972_length_252_cov_2.442396_g56031_i0forward_frame_1 - 0.026 14.1 0.0 0.031 13.8 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5579) Amb_V_allergen PF03913.13 NODE_63970_length_252_cov_2.470046_g56029_i0reverse_frame_1 - 0.78 9.7 7.9 2.1 8.4 0.8 2.6 2 1 0 2 2 2 0 Amb V Allergen zf-C2H2_9 PF16293.5 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_1 - 0.16 11.8 2.3 0.16 11.9 0.8 1.7 1 1 1 2 2 2 0 C2H2 type zinc-finger (1 copy) SelK_SelG PF10961.8 NODE_63962_length_252_cov_2.645161_g56021_i0forward_frame_1 - 0.055 14.1 0.0 0.079 13.6 0.0 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG Na_K-ATPase PF00287.18 NODE_63960_length_252_cov_2.668203_g56019_i0forward_frame_1 - 0.034 13.3 1.2 0.037 13.2 1.2 1.0 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Peptidase_C2 PF00648.21 NODE_63956_length_252_cov_2.737327_g56015_i0reverse_frame_1 - 3.3e-15 55.9 0.0 3.8e-15 55.7 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease DUF354 PF04007.12 NODE_63954_length_252_cov_2.889401_g56013_i0reverse_frame_1 - 0.1 11.6 0.1 0.47 9.5 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF354) PhoLip_ATPase_N PF16209.5 NODE_63952_length_252_cov_2.944700_g56011_i0forward_frame_1 - 0.021 14.5 1.5 0.031 14.0 1.5 1.3 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal Ring_hydroxyl_A PF00848.19 NODE_63952_length_252_cov_2.944700_g56011_i0forward_frame_1 - 0.25 11.3 0.1 0.26 11.2 0.1 1.1 1 0 0 1 1 1 0 Ring hydroxylating alpha subunit (catalytic domain) MCM_lid PF17855.1 NODE_63947_length_252_cov_3.304147_g56006_i0forward_frame_1 - 2.1e-10 40.9 0.6 1.1e-09 38.5 0.3 1.9 2 0 0 2 2 2 1 MCM AAA-lid domain FAD_binding_5 PF00941.21 NODE_63943_length_252_cov_4.617512_g56002_i0reverse_frame_1 - 0.2 11.4 0.0 0.22 11.2 0.0 1.0 1 0 0 1 1 1 0 FAD binding domain in molybdopterin dehydrogenase DUF1738 PF08401.11 NODE_63940_length_252_cov_11.147465_g55999_i0reverse_frame_1 - 0.0027 17.8 1.2 0.0067 16.5 0.0 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF1738) YibE_F PF07907.11 NODE_63933_length_252_cov_25.691244_g55992_i0forward_frame_1 - 0.18 11.3 12.3 0.21 11.0 12.3 1.0 1 0 0 1 1 1 0 YibE/F-like protein TMCCDC2 PF15844.5 NODE_63933_length_252_cov_25.691244_g55992_i0forward_frame_1 - 0.59 10.0 4.1 0.62 10.0 4.1 1.2 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 DUF493 PF04359.14 NODE_63930_length_252_cov_39.801843_g55989_i0reverse_frame_1 - 5.3e-05 23.7 0.0 6.7e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF493) ACT_4 PF13291.6 NODE_63930_length_252_cov_39.801843_g55989_i0reverse_frame_1 - 0.047 14.3 0.0 0.061 13.9 0.0 1.1 1 0 0 1 1 1 0 ACT domain Planc_extracel PF07595.12 NODE_63930_length_252_cov_39.801843_g55989_i0forward_frame_1 - 0.026 14.3 1.2 0.026 14.3 1.2 2.0 2 0 0 2 2 2 0 Planctomycete extracellular SNAD1 PF18744.1 NODE_63923_length_252_cov_48.672811_g55982_i0reverse_frame_1 - 0.011 15.6 0.9 0.012 15.5 0.9 1.0 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 1 Glyco_hydro_2 PF00703.21 NODE_63923_length_252_cov_48.672811_g55982_i0reverse_frame_1 - 0.88 10.3 7.9 1 10.0 7.9 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 2 Porin_5 PF16930.5 NODE_63923_length_252_cov_48.672811_g55982_i0reverse_frame_1 - 2.7 6.4 6.9 3.1 6.2 6.9 1.0 1 0 0 1 1 1 0 Putative porin DUF4603 PF15376.6 NODE_63923_length_252_cov_48.672811_g55982_i0reverse_frame_1 - 2.9 5.2 12.9 3.6 4.9 12.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) Ank PF00023.30 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.00028 21.2 0.0 0.00045 20.5 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeat Ank_2 PF12796.7 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.00053 20.5 0.0 0.00059 20.4 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.0074 16.6 0.0 0.011 16.1 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.085 13.5 0.0 0.16 12.6 0.0 1.5 1 0 0 1 1 1 0 Ankyrin repeat Ank_4 PF13637.6 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.096 13.3 0.0 0.15 12.7 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) RRM_1 PF00076.22 NODE_63915_length_252_cov_56.668203_g55974_i0forward_frame_1 - 3.6e-05 23.5 0.0 5.8e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 NODE_63915_length_252_cov_56.668203_g55974_i0forward_frame_1 - 0.00071 19.6 0.0 0.0009 19.3 0.0 1.2 1 0 0 1 1 1 1 Limkain b1 Nup35_RRM_2 PF14605.6 NODE_63915_length_252_cov_56.668203_g55974_i0forward_frame_1 - 0.003 17.5 0.0 0.0049 16.8 0.0 1.3 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif CaATP_NAI PF12515.8 NODE_63912_length_252_cov_63.792627_g55971_i0reverse_frame_1 - 0.31 10.7 3.2 0.45 10.2 3.2 1.2 1 0 0 1 1 1 0 Ca2+-ATPase N terminal autoinhibitory domain DUF2195 PF09961.9 NODE_63906_length_252_cov_69.456221_g55965_i0reverse_frame_1 - 0.06 13.3 0.1 0.074 13.0 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2195) DUF1737 PF08410.10 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_1 - 0.039 13.8 8.9 0.33 10.9 0.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF1737) DUF1999 PF09390.10 NODE_63893_length_252_cov_118.276498_g55952_i0forward_frame_1 - 0.063 12.9 0.0 0.07 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) FAD-SLDH PF12318.8 NODE_63890_length_252_cov_131.566820_g55949_i0reverse_frame_1 - 0.039 14.0 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase Mononeg_RNA_pol PF00946.19 NODE_63883_length_252_cov_276.179724_g55942_i0forward_frame_1 - 0.055 11.1 0.0 0.057 11.1 0.0 1.0 1 0 0 1 1 1 0 Mononegavirales RNA dependent RNA polymerase DUF2102 PF09875.9 NODE_63877_length_252_cov_4346.142857_g55936_i0reverse_frame_1 - 0.028 14.1 0.0 0.034 13.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) PBP_N PF17093.5 NODE_63871_length_253_cov_1.059633_g55930_i0forward_frame_3 - 0.0091 16.3 0.5 0.0094 16.2 0.5 1.1 1 0 0 1 1 1 1 Penicillin-binding protein N-terminus Glyco_hydro_31 PF01055.26 NODE_63868_length_253_cov_1.087156_g55927_i0reverse_frame_3 - 2.4e-11 43.5 0.1 2.7e-11 43.3 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF348 PF03990.14 NODE_63866_length_253_cov_1.096330_g55925_i0reverse_frame_2 - 0.051 13.3 0.2 0.084 12.6 0.2 1.3 1 0 0 1 1 1 0 G5-linked-Ubiquitin-like domain DUF3040 PF11239.8 NODE_63858_length_253_cov_1.238532_g55917_i0reverse_frame_2 - 0.016 15.5 0.2 0.025 14.8 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3040) PCSK9_C3 PF18463.1 NODE_63858_length_253_cov_1.238532_g55917_i0reverse_frame_2 - 0.071 13.3 0.8 0.18 12.0 0.8 1.7 1 1 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain WBP-1 PF11669.8 NODE_63858_length_253_cov_1.238532_g55917_i0forward_frame_2 - 0.039 14.6 0.5 0.054 14.1 0.5 1.3 1 1 0 1 1 1 0 WW domain-binding protein 1 SK_channel PF03530.14 NODE_63853_length_253_cov_1.330275_g55912_i0reverse_frame_2 - 0.032 14.2 0.1 0.05 13.6 0.1 1.3 1 1 0 1 1 1 0 Calcium-activated SK potassium channel DUF5313 PF17240.2 NODE_63852_length_253_cov_1.334862_g55911_i0reverse_frame_2 - 3.1 8.3 6.0 3.7 8.0 6.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Rtt106_N PF18215.1 NODE_63847_length_253_cov_1.431193_g55906_i0reverse_frame_2 - 0.067 12.9 0.2 0.099 12.4 0.2 1.3 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain Sugar_tr PF00083.24 NODE_63844_length_253_cov_1.463303_g55903_i0forward_frame_3 - 6.1e-06 25.4 1.0 7.5e-06 25.1 1.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter VEGFR-2_TMD PF17988.1 NODE_63843_length_253_cov_1.463303_g55902_i0reverse_frame_2 - 0.15 11.5 2.4 5.6 6.5 0.6 2.3 2 0 0 2 2 2 0 VEGFR-2 Transmembrane domain Abhydro_lipase PF04083.16 NODE_63839_length_253_cov_1.522936_g55898_i0reverse_frame_3 - 0.064 12.9 0.3 0.089 12.4 0.3 1.4 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region zf-RING_2 PF13639.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 3.5e-07 30.4 2.5 3.5e-07 30.4 2.5 1.4 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 1.1e-05 25.6 1.6 2.3e-05 24.6 1.6 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 5.7e-05 22.9 2.8 0.0001 22.1 2.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 7.4e-05 22.7 1.4 0.00012 22.1 1.4 1.3 1 0 0 1 1 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.00013 21.5 1.9 0.00013 21.5 1.9 1.8 2 1 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.00016 21.4 2.3 0.00016 21.4 2.3 1.9 2 1 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.00025 20.8 2.8 0.00043 20.1 2.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.011 15.8 0.9 0.027 14.6 1.0 1.6 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.02 14.9 1.6 0.031 14.3 1.6 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.044 13.7 1.4 0.075 12.9 1.4 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.061 13.3 2.6 0.12 12.4 2.6 1.5 1 0 0 1 1 1 0 zinc-RING finger domain zf-C3H2C3 PF17122.5 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.063 13.3 1.4 0.063 13.3 1.4 1.6 2 0 0 2 2 2 0 Zinc-finger FANCL_C PF11793.8 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.11 12.6 3.0 0.28 11.4 3.0 1.7 1 1 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.29 11.3 3.3 0.72 10.0 2.1 2.2 2 1 0 2 2 2 0 RING-variant domain TRADD_N PF09034.10 NODE_63837_length_253_cov_1.550459_g55896_i0forward_frame_2 - 0.024 14.7 0.4 0.029 14.4 0.4 1.2 1 0 0 1 1 1 0 TRADD, N-terminal domain zf-FCS PF06467.14 NODE_63835_length_253_cov_1.568807_g55894_i0forward_frame_2 - 0.008 16.1 0.1 0.014 15.3 0.1 1.4 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif BIRC6 PF12356.8 NODE_63830_length_253_cov_1.669725_g55889_i0forward_frame_3 - 0.06 12.8 0.4 0.062 12.7 0.4 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 DUF98 PF01947.16 NODE_63827_length_253_cov_1.688073_g55886_i0reverse_frame_3 - 0.015 15.2 0.1 0.017 15.1 0.1 1.0 1 0 0 1 1 1 0 p-hydroxybenzoic acid synthase Aldo_ket_red PF00248.21 NODE_63827_length_253_cov_1.688073_g55886_i0reverse_frame_2 - 3.5e-11 42.9 0.0 1.2e-10 41.1 0.0 1.7 1 1 0 1 1 1 1 Aldo/keto reductase family IF2_N PF04760.15 NODE_63827_length_253_cov_1.688073_g55886_i0reverse_frame_2 - 0.11 12.3 0.2 0.24 11.2 0.2 1.7 1 1 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region SDH_C PF18317.1 NODE_63827_length_253_cov_1.688073_g55886_i0forward_frame_3 - 0.013 15.3 0.3 1.4 8.7 0.1 2.2 2 0 0 2 2 2 0 Shikimate 5'-dehydrogenase C-terminal domain DUF1912 PF08930.10 NODE_63826_length_253_cov_1.697248_g55885_i0forward_frame_3 - 0.016 15.3 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1912) FliD_N PF02465.18 NODE_63826_length_253_cov_1.697248_g55885_i0forward_frame_3 - 0.056 14.1 0.1 0.066 13.9 0.1 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus PMT_4TMC PF16192.5 NODE_63824_length_253_cov_1.738532_g55883_i0forward_frame_3 - 0.0073 15.9 1.6 0.0084 15.7 1.6 1.0 1 0 0 1 1 1 1 C-terminal four TMM region of protein-O-mannosyltransferase CCER1 PF15482.6 NODE_63824_length_253_cov_1.738532_g55883_i0forward_frame_3 - 1.8 8.4 5.5 2.4 8.0 5.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF5361 PF17318.2 NODE_63821_length_253_cov_1.802752_g55880_i0reverse_frame_3 - 0.057 13.6 0.0 0.068 13.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5361) a_DG1_N2 PF18424.1 NODE_63818_length_253_cov_1.885321_g55877_i0forward_frame_3 - 0.16 12.1 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Alpha-Dystroglycan N-terminal domain 2 Kelch_1 PF01344.25 NODE_63815_length_253_cov_1.926606_g55874_i0reverse_frame_3 - 0.0057 16.2 0.0 0.011 15.3 0.0 1.5 1 0 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 NODE_63815_length_253_cov_1.926606_g55874_i0reverse_frame_3 - 0.099 12.7 0.3 0.34 10.9 0.0 2.0 2 0 0 2 2 2 0 Kelch motif DUF5542 PF17696.1 NODE_63809_length_253_cov_2.009174_g55868_i0forward_frame_2 - 1.1 9.4 6.3 2.5 8.3 6.3 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5542) MSA-2c PF12238.8 NODE_63807_length_253_cov_2.068807_g55866_i0reverse_frame_2 - 2.2 8.2 6.7 2.5 8.1 6.7 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c ATP-synt_8 PF00895.20 NODE_63806_length_253_cov_2.096330_g55865_i0reverse_frame_2 - 6.4 7.3 11.0 11 6.6 3.4 2.1 1 1 1 2 2 2 0 ATP synthase protein 8 DUF5626 PF18540.1 NODE_63806_length_253_cov_2.096330_g55865_i0forward_frame_3 - 0.027 15.0 2.9 0.032 14.7 2.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5626) Glyco_hydro_49N PF17433.2 NODE_63800_length_253_cov_2.243119_g55859_i0forward_frame_2 - 0.0077 15.9 0.2 0.009 15.7 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 49 N-terminal Ig-like domain KaiB PF07689.12 NODE_63798_length_253_cov_2.261468_g55857_i0reverse_frame_2 - 0.042 13.6 0.0 0.058 13.1 0.0 1.1 1 0 0 1 1 1 0 KaiB domain zf-U1 PF06220.12 NODE_63797_length_253_cov_2.325688_g55856_i0forward_frame_3 - 0.055 13.2 0.7 0.095 12.5 0.7 1.4 1 0 0 1 1 1 0 U1 zinc finger DUF4558 PF15104.6 NODE_63793_length_253_cov_2.412844_g55852_i0reverse_frame_2 - 0.023 14.7 0.3 0.038 14.0 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4558) DDE_Tnp_IS240 PF13610.6 NODE_63793_length_253_cov_2.412844_g55852_i0reverse_frame_2 - 0.048 13.9 0.1 0.053 13.8 0.1 1.1 1 0 0 1 1 1 0 DDE domain DUF4264 PF14084.6 NODE_63791_length_253_cov_2.440367_g55850_i0reverse_frame_3 - 0.027 14.1 4.5 0.14 11.8 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4264) RCC1 PF00415.18 NODE_63785_length_253_cov_2.619266_g55844_i0forward_frame_3 - 4.3e-15 56.1 7.6 4.8e-10 39.9 0.0 3.0 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_63785_length_253_cov_2.619266_g55844_i0forward_frame_3 - 1.5e-12 47.0 6.0 1.8e-05 24.4 0.5 2.8 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat TMEM251 PF15190.6 NODE_63782_length_253_cov_2.743119_g55841_i0reverse_frame_3 - 0.036 14.0 0.0 0.04 13.9 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 251 DUF5538 PF17692.1 NODE_63782_length_253_cov_2.743119_g55841_i0forward_frame_2 - 0.018 15.1 0.8 0.022 14.8 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) Iso_dh PF00180.20 NODE_63780_length_253_cov_3.009174_g55839_i0forward_frame_3 - 1.3e-07 31.1 0.0 1.4e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DUF3364 PF11844.8 NODE_63780_length_253_cov_3.009174_g55839_i0forward_frame_3 - 0.074 13.3 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) Dickkopf_N PF04706.12 NODE_63779_length_253_cov_3.009174_g55838_i0reverse_frame_3 - 0.042 14.3 1.7 0.043 14.3 0.3 1.7 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region AMP-binding PF00501.28 NODE_63779_length_253_cov_3.009174_g55838_i0forward_frame_2 - 6e-17 61.4 0.1 6.5e-17 61.2 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme MRP-L47 PF06984.13 NODE_63775_length_253_cov_3.174312_g55834_i0reverse_frame_2 - 0.1 12.7 0.1 0.4 10.8 0.0 1.8 2 0 0 2 2 2 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) Mito_carr PF00153.27 NODE_63774_length_253_cov_3.224771_g55833_i0reverse_frame_2 - 0.014 15.3 0.0 0.022 14.7 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial carrier protein Peptidase_C4 PF00863.19 NODE_63774_length_253_cov_3.224771_g55833_i0reverse_frame_2 - 0.072 12.4 0.1 0.081 12.2 0.1 1.0 1 0 0 1 1 1 0 Peptidase family C4 DZR PF12773.7 NODE_63773_length_253_cov_3.633028_g55832_i0reverse_frame_3 - 0.15 12.1 1.2 9.2 6.4 0.1 2.1 1 1 1 2 2 2 0 Double zinc ribbon FGAR-AT_N PF18076.1 NODE_63773_length_253_cov_3.633028_g55832_i0forward_frame_2 - 0.43 10.6 3.7 9.4 6.3 0.5 2.1 2 0 0 2 2 2 0 Formylglycinamide ribonucleotide amidotransferase N-terminal CDT1 PF08839.11 NODE_63772_length_253_cov_3.857798_g55831_i0forward_frame_3 - 0.053 13.8 4.1 0.063 13.6 4.1 1.1 1 0 0 1 1 1 0 DNA replication factor CDT1 like Phage_1_1 PF08200.11 NODE_63772_length_253_cov_3.857798_g55831_i0forward_frame_2 - 4.4 7.8 8.2 18 5.8 8.0 2.2 1 1 0 1 1 1 0 Bacteriophage 1.1 Protein Band_3_cyto PF07565.13 NODE_63772_length_253_cov_3.857798_g55831_i0forward_frame_2 - 5.9 6.6 8.3 6.5 6.5 8.3 1.0 1 0 0 1 1 1 0 Band 3 cytoplasmic domain ROK PF00480.20 NODE_63770_length_253_cov_4.266055_g55829_i0reverse_frame_3 - 2.8e-25 89.4 2.7 2.9e-25 89.4 2.7 1.0 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 NODE_63770_length_253_cov_4.266055_g55829_i0reverse_frame_3 - 0.00017 20.7 0.1 0.0002 20.5 0.1 1.0 1 0 0 1 1 1 1 Glucokinase TMEMspv1-c74-12 PF11044.8 NODE_63764_length_253_cov_26.761468_g55823_i0reverse_frame_2 - 0.11 12.5 2.1 0.16 11.9 2.1 1.2 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein FaeA PF04703.12 NODE_63764_length_253_cov_26.761468_g55823_i0reverse_frame_2 - 0.17 12.3 0.0 0.26 11.7 0.0 1.2 1 0 0 1 1 1 0 FaeA-like protein Gallidermin PF02052.15 NODE_63762_length_253_cov_30.885321_g55821_i0forward_frame_2 - 0.099 13.0 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Gallidermin Nodulin_late PF07127.11 NODE_63761_length_253_cov_34.986239_g55820_i0forward_frame_3 - 0.18 12.2 1.8 0.25 11.7 1.8 1.3 1 0 0 1 1 1 0 Late nodulin protein Methyltrn_RNA_3 PF02598.17 NODE_63759_length_253_cov_35.972477_g55818_i0forward_frame_2 - 0.04 13.4 0.4 0.044 13.3 0.4 1.0 1 0 0 1 1 1 0 Putative RNA methyltransferase HIP1_clath_bdg PF16515.5 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.00084 19.9 3.9 0.00084 19.9 3.9 1.6 2 0 0 2 2 2 1 Clathrin-binding domain of Huntingtin-interacting protein 1 GAS PF13851.6 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.0056 16.0 15.3 0.0059 16.0 15.3 1.0 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding CENP-F_leu_zip PF10473.9 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.041 13.9 15.7 0.047 13.7 15.7 1.0 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 V_ATPase_I PF01496.19 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.23 9.3 7.2 0.25 9.2 7.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family UPF0242 PF06785.11 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.57 10.3 11.7 0.63 10.1 11.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus NUDE_C PF04880.13 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.61 10.5 11.1 0.17 12.3 5.9 1.9 1 1 1 2 2 2 0 NUDE protein, C-terminal conserved region HSP70 PF00012.20 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 1.2 7.2 8.2 1.3 7.1 8.2 1.0 1 0 0 1 1 1 0 Hsp70 protein Swi5 PF07061.11 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 7.6 6.7 12.0 1.1 9.4 2.9 2.0 1 1 1 2 2 2 0 Swi5 DUF1133 PF06576.11 NODE_63756_length_253_cov_40.348624_g55815_i0reverse_frame_2 - 8.9e-05 21.9 1.2 9.9e-05 21.8 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1133) EamA PF00892.20 NODE_63753_length_253_cov_45.229358_g55812_i0reverse_frame_2 - 0.0013 18.9 1.6 0.0015 18.7 1.6 1.1 1 0 0 1 1 1 1 EamA-like transporter family GOLGA2L5 PF15070.6 NODE_63751_length_253_cov_48.935780_g55810_i0reverse_frame_3 - 0.029 13.0 0.0 0.031 13.0 0.0 1.1 1 0 0 1 1 1 0 Putative golgin subfamily A member 2-like protein 5 STG PF15809.5 NODE_63749_length_253_cov_58.119266_g55808_i0forward_frame_3 - 0.04 14.0 0.0 0.046 13.8 0.0 1.1 1 0 0 1 1 1 0 Simian taste bud-specific gene product family DUF4064 PF13273.6 NODE_63748_length_253_cov_61.403670_g55807_i0reverse_frame_3 - 0.054 13.8 3.3 0.089 13.1 3.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) Transmemb_17 PF09799.9 NODE_63746_length_253_cov_65.573394_g55805_i0forward_frame_2 - 5.9e-08 33.3 0.1 6.9e-08 33.0 0.1 1.2 1 0 0 1 1 1 1 Predicted membrane protein HR1 PF02185.16 NODE_63743_length_253_cov_68.463303_g55802_i0forward_frame_2 - 0.012 15.7 0.9 0.012 15.7 0.9 2.1 1 1 1 2 2 2 0 Hr1 repeat Peptidase_C31 PF05410.13 NODE_63742_length_253_cov_74.481651_g55801_i0forward_frame_2 - 0.0023 18.0 0.0 0.0028 17.7 0.0 1.1 1 0 0 1 1 1 1 Porcine arterivirus-type cysteine proteinase alpha Toxin_18 PF08087.11 NODE_63741_length_253_cov_83.077982_g55800_i0reverse_frame_2 - 0.0065 16.4 1.5 0.0065 16.4 1.5 1.7 2 0 0 2 2 2 1 Conotoxin O-superfamily Gliadin PF13016.6 NODE_63736_length_253_cov_101.155963_g55795_i0forward_frame_2 - 0.054 13.9 0.2 0.071 13.5 0.2 1.2 1 0 0 1 1 1 0 Cys-rich Gliadin N-terminal Ntox28 PF15605.6 NODE_63730_length_253_cov_123.894495_g55789_i0reverse_frame_3 - 0.047 13.9 0.1 0.056 13.7 0.1 1.3 1 1 0 1 1 1 0 Bacterial toxin 28 2OG-FeII_Oxy_3 PF13640.6 NODE_63727_length_253_cov_159.357798_g55786_i0reverse_frame_2 - 4.1e-06 27.6 0.0 5e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 NODE_63727_length_253_cov_159.357798_g55786_i0reverse_frame_2 - 0.013 15.9 0.0 0.019 15.4 0.0 1.2 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy_4 PF13661.6 NODE_63727_length_253_cov_159.357798_g55786_i0reverse_frame_2 - 0.087 13.5 0.0 0.11 13.2 0.0 1.1 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily DUF5523 PF17661.1 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.23 11.1 13.4 0.25 11.0 13.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5523) CobT PF06213.12 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.33 10.3 15.0 0.33 10.3 15.0 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT SDA1 PF05285.12 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.44 9.9 18.6 0.52 9.7 18.6 1.2 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.57 8.3 20.4 0.6 8.3 20.4 1.0 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.7 8.1 15.1 0.7 8.1 15.1 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF913 PF06025.12 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 1 8.3 5.1 1.2 8.1 5.1 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) YL1 PF05764.13 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 1.6 8.8 18.4 1.8 8.6 18.4 1.1 1 0 0 1 1 1 0 YL1 nuclear protein DNA_pol_phi PF04931.13 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 1.7 6.6 23.1 1.8 6.6 23.1 1.0 1 0 0 1 1 1 0 DNA polymerase phi TRAP_alpha PF03896.16 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 3.2 6.9 11.5 3.3 6.8 11.5 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Tim54 PF11711.8 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 3.4 6.4 9.2 3.8 6.2 9.2 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Presenilin PF01080.17 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 8.5 5.0 5.6 8.4 5.0 5.6 1.0 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 8.6 5.5 5.5 8.8 5.4 5.5 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Roughex PF06020.11 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 10 5.1 11.9 11 5.1 11.9 1.1 1 0 0 1 1 1 0 Drosophila roughex protein YqgC PF17430.2 NODE_63719_length_253_cov_612.311927_g55778_i0forward_frame_3 - 0.16 12.1 0.1 0.23 11.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized YqgC-like YqgC PF17430.2 NODE_63718_length_253_cov_664.004587_g55777_i0reverse_frame_3 - 0.16 12.1 0.1 0.23 11.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized YqgC-like DUF3482 PF11981.8 NODE_63716_length_253_cov_25627.298165_g55775_i0forward_frame_2 - 0.058 12.8 8.7 0.072 12.5 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) DUF3482 PF11981.8 NODE_63715_length_253_cov_25627.458716_g55774_i0forward_frame_2 - 0.057 12.8 8.7 0.072 12.5 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) YqzE PF14038.6 NODE_63711_length_254_cov_1.031963_g55770_i0reverse_frame_3 - 0.0009 19.2 1.2 0.0014 18.6 1.2 1.3 1 0 0 1 1 1 1 YqzE-like protein DUF5456 PF17539.2 NODE_63711_length_254_cov_1.031963_g55770_i0reverse_frame_3 - 0.044 13.7 1.0 0.044 13.6 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5456) PsbH PF00737.20 NODE_63711_length_254_cov_1.031963_g55770_i0forward_frame_3 - 1.6 8.5 3.1 0.73 9.6 0.5 1.8 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein NTS_2 PF15448.6 NODE_63709_length_254_cov_1.091324_g55768_i0reverse_frame_3 - 0.053 13.9 0.5 0.097 13.1 0.5 1.4 1 0 0 1 1 1 0 N-terminal segments of P. falciparum erythrocyte membrane protein DsbD PF02683.15 NODE_63707_length_254_cov_1.095890_g55766_i0reverse_frame_2 - 0.04 13.8 0.3 0.042 13.7 0.3 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region DUF2670 PF10875.8 NODE_63707_length_254_cov_1.095890_g55766_i0forward_frame_3 - 0.15 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) Baculo_p48 PF04878.13 NODE_63705_length_254_cov_1.123288_g55764_i0reverse_frame_3 - 0.037 13.0 0.3 0.044 12.7 0.3 1.0 1 0 0 1 1 1 0 Baculovirus P48 protein DUF1106 PF06523.11 NODE_63703_length_254_cov_1.132420_g55762_i0reverse_frame_3 - 0.079 13.0 0.2 0.11 12.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1106) DUF3876 PF12992.7 NODE_63703_length_254_cov_1.132420_g55762_i0reverse_frame_3 - 0.17 12.0 1.0 15 5.7 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3876) DM4_12 PF07841.13 NODE_63699_length_254_cov_1.228311_g55758_i0reverse_frame_2 - 0.066 13.9 0.1 0.086 13.5 0.1 1.2 1 0 0 1 1 1 0 DM4/DM12 family DUF3693 PF12472.8 NODE_63696_length_254_cov_1.273973_g55755_i0forward_frame_3 - 0.043 13.5 0.1 0.053 13.2 0.1 1.1 1 0 0 1 1 1 0 Phage related protein Chitin_synth_1 PF01644.17 NODE_63691_length_254_cov_1.324201_g55750_i0reverse_frame_3 - 3.5e-14 53.1 0.0 3.7e-14 53.0 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase DUF1451 PF07295.11 NODE_63687_length_254_cov_1.369863_g55746_i0forward_frame_2 - 0.072 13.1 0.2 0.082 12.9 0.2 1.0 1 0 0 1 1 1 0 Zinc-ribbon containing domain CLZ PF16526.5 NODE_63687_length_254_cov_1.369863_g55746_i0forward_frame_2 - 0.099 13.0 0.3 3.6 8.0 0.0 2.0 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Fanconi_A PF03511.14 NODE_63678_length_254_cov_1.456621_g55737_i0reverse_frame_3 - 0.023 14.6 0.2 0.044 13.7 0.2 1.5 1 1 0 1 1 1 0 Fanconi anaemia group A protein PsbL PF02419.17 NODE_63678_length_254_cov_1.456621_g55737_i0reverse_frame_3 - 0.044 13.8 0.3 0.092 12.8 0.3 1.5 1 0 0 1 1 1 0 PsbL protein HBD PF18534.1 NODE_63675_length_254_cov_1.461187_g55734_i0forward_frame_2 - 0.007 16.5 0.0 0.0083 16.2 0.0 1.1 1 0 0 1 1 1 1 Helical bundle domain FAT PF02259.23 NODE_63673_length_254_cov_1.461187_g55732_i0forward_frame_3 - 0.022 14.0 0.2 0.022 14.0 0.2 1.1 1 0 0 1 1 1 0 FAT domain RST PF12174.8 NODE_63672_length_254_cov_1.493151_g55731_i0forward_frame_3 - 0.05 13.5 0.5 0.085 12.8 0.5 1.4 1 0 0 1 1 1 0 RCD1-SRO-TAF4 (RST) plant domain DUF3945 PF13101.6 NODE_63671_length_254_cov_1.511416_g55730_i0reverse_frame_3 - 0.028 14.1 0.1 0.037 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3945) ABC_membrane PF00664.23 NODE_63671_length_254_cov_1.511416_g55730_i0forward_frame_3 - 1.4e-06 28.2 0.2 1.5e-06 28.1 0.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region QueF PF14489.6 NODE_63669_length_254_cov_1.552511_g55728_i0forward_frame_3 - 0.018 15.2 0.5 0.079 13.1 0.1 1.9 1 1 1 2 2 2 0 QueF-like protein DUF3310 PF11753.8 NODE_63667_length_254_cov_1.593607_g55726_i0reverse_frame_3 - 0.024 14.8 0.3 0.031 14.5 0.3 1.3 1 0 0 1 1 1 0 Protein of unknwon function (DUF3310) Pes-10 PF07149.11 NODE_63667_length_254_cov_1.593607_g55726_i0reverse_frame_2 - 4.6 6.2 6.1 5.2 6.0 6.1 1.0 1 0 0 1 1 1 0 Pes-10 7TMR-DISM_7TM PF07695.11 NODE_63664_length_254_cov_1.625571_g55723_i0forward_frame_3 - 0.17 11.8 2.8 0.19 11.6 2.8 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling DUF3748 PF12566.8 NODE_63660_length_254_cov_1.707763_g55719_i0forward_frame_2 - 0.2 11.6 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3748) DUF3090 PF11290.8 NODE_63655_length_254_cov_1.812785_g55714_i0reverse_frame_2 - 0.11 12.2 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3090) Ribosomal_S22 PF08136.11 NODE_63649_length_254_cov_1.876712_g55708_i0forward_frame_3 - 1.2e-30 105.6 0.7 1.5e-30 105.3 0.7 1.1 1 0 0 1 1 1 1 30S ribosomal protein subunit S22 family PHD PF00628.29 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.0095 15.8 0.8 0.013 15.4 0.8 1.2 1 0 0 1 1 1 1 PHD-finger Prok-RING_1 PF14446.6 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.011 15.7 0.9 0.013 15.4 0.9 1.1 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-RING_11 PF17123.5 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.049 13.4 0.3 0.09 12.5 0.3 1.4 1 0 0 1 1 1 0 RING-like zinc finger Kisspeptin PF15152.6 NODE_63641_length_254_cov_2.031963_g55700_i0forward_frame_3 - 0.13 13.0 0.2 0.17 12.7 0.2 1.2 1 0 0 1 1 1 0 Kisspeptin zf-U1 PF06220.12 NODE_63640_length_254_cov_2.041096_g55699_i0reverse_frame_2 - 0.31 10.9 3.1 0.68 9.7 0.4 2.1 2 0 0 2 2 2 0 U1 zinc finger Qn_am_d_aII PF14930.6 NODE_63640_length_254_cov_2.041096_g55699_i0forward_frame_2 - 0.042 14.2 0.2 0.048 14.0 0.2 1.1 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain II DUF975 PF06161.11 NODE_63637_length_254_cov_2.114155_g55696_i0forward_frame_3 - 0.058 13.2 6.0 0.067 13.0 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF975) DUF3599 PF12206.8 NODE_63636_length_254_cov_2.127854_g55695_i0reverse_frame_3 - 0.057 13.8 0.1 0.1 13.0 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3599) Kelch_6 PF13964.6 NODE_63635_length_254_cov_2.168950_g55694_i0forward_frame_3 - 0.059 13.7 0.2 0.1 12.9 0.2 1.4 1 1 0 1 1 1 0 Kelch motif # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks286.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks286.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks286.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks286.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:02:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- KASH_CCD PF14662.6 NODE_63632_length_254_cov_2.296804_g55691_i0reverse_frame_2 - 0.044 13.6 8.7 0.3 10.9 8.7 1.9 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH UBN_AB PF14075.6 NODE_63632_length_254_cov_2.296804_g55691_i0reverse_frame_2 - 0.054 13.2 4.4 0.046 13.4 2.3 1.7 1 1 1 2 2 2 0 Ubinuclein conserved middle domain OmpH PF03938.14 NODE_63632_length_254_cov_2.296804_g55691_i0reverse_frame_2 - 0.32 11.3 7.0 0.36 11.2 7.0 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Fungal_TACC PF12709.7 NODE_63632_length_254_cov_2.296804_g55691_i0reverse_frame_2 - 0.37 11.3 8.6 0.42 11.1 3.7 2.1 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins GTPase_binding PF09027.10 NODE_63630_length_254_cov_2.433790_g55689_i0reverse_frame_3 - 2.2 8.3 4.8 9.9 6.2 0.5 2.3 1 1 1 2 2 2 0 GTPase binding Fimbrial PF00419.20 NODE_63630_length_254_cov_2.433790_g55689_i0forward_frame_3 - 2.4e-06 27.9 0.4 2.6e-06 27.8 0.4 1.0 1 0 0 1 1 1 1 Fimbrial protein Cactin_mid PF10312.9 NODE_63628_length_254_cov_2.493151_g55687_i0forward_frame_2 - 0.035 13.8 0.6 0.035 13.8 0.6 1.1 1 0 0 1 1 1 0 Conserved mid region of cactin Colipase-like PF15083.6 NODE_63623_length_254_cov_2.945205_g55682_i0forward_frame_3 - 0.037 14.2 0.1 0.04 14.0 0.1 1.2 1 0 0 1 1 1 0 Colipase-like Dicer_dimer PF03368.14 NODE_63623_length_254_cov_2.945205_g55682_i0forward_frame_3 - 0.056 13.6 0.0 0.064 13.4 0.0 1.2 1 0 0 1 1 1 0 Dicer dimerisation domain TfuA PF07812.12 NODE_63621_length_254_cov_3.159817_g55680_i0reverse_frame_3 - 0.062 13.0 0.0 0.071 12.8 0.0 1.3 1 0 0 1 1 1 0 TfuA-like protein zf-C3HC4_3 PF13920.6 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 0.0074 16.1 0.4 0.0092 15.8 0.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) TMEM125 PF15109.6 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 0.043 14.1 0.0 0.051 13.9 0.0 1.1 1 0 0 1 1 1 0 TMEM125 protein family zinc_ribbon_9 PF14369.6 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 0.054 13.8 0.6 0.073 13.3 0.6 1.2 1 0 0 1 1 1 0 zinc-ribbon NCD3G PF07562.14 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 0.077 13.0 1.3 0.11 12.4 1.3 1.2 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR DUF2197 PF09963.9 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 0.72 10.2 4.7 4.5 7.6 0.4 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) Plant_zn_clust PF10533.9 NODE_63616_length_254_cov_3.611872_g55675_i0reverse_frame_2 - 0.38 10.8 15.2 0.095 12.7 9.9 2.0 2 0 0 2 2 2 0 Plant zinc cluster domain SVM_signal PF12113.8 NODE_63615_length_254_cov_3.721461_g55674_i0forward_frame_3 - 5.7 6.9 11.8 11 6.1 2.8 2.4 2 0 0 2 2 2 0 SVM protein signal sequence ARHGEF5_35 PF15441.6 NODE_63614_length_254_cov_3.803653_g55673_i0forward_frame_3 - 0.019 14.0 0.7 0.021 13.9 0.7 1.0 1 0 0 1 1 1 0 Rho guanine nucleotide exchange factor 5/35 DUF4123 PF13503.6 NODE_63614_length_254_cov_3.803653_g55673_i0forward_frame_3 - 0.082 13.3 0.0 0.091 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4123) DUF3453 PF11935.8 NODE_63611_length_254_cov_4.739726_g55670_i0reverse_frame_2 - 0.0061 16.2 0.2 0.0069 16.0 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3453) Baculo_helicase PF04735.12 NODE_63604_length_254_cov_34.182648_g55663_i0forward_frame_2 - 0.0014 16.3 0.3 0.0015 16.2 0.3 1.0 1 0 0 1 1 1 1 Baculovirus DNA helicase FMO-like PF00743.19 NODE_63603_length_254_cov_36.844749_g55662_i0reverse_frame_3 - 0.0085 14.6 0.4 0.01 14.3 0.4 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like CaKB PF03185.15 NODE_63601_length_254_cov_38.840183_g55660_i0reverse_frame_3 - 0.18 11.5 1.3 0.18 11.4 1.3 1.1 1 0 0 1 1 1 0 Calcium-activated potassium channel, beta subunit TCR_zetazeta PF11628.8 NODE_63601_length_254_cov_38.840183_g55660_i0forward_frame_2 - 0.051 13.2 0.1 0.11 12.2 0.1 1.4 1 0 0 1 1 1 0 T-cell surface glycoprotein CD3 zeta chain Fib_alpha PF08702.10 NODE_63600_length_254_cov_41.401826_g55659_i0reverse_frame_2 - 0.13 12.5 4.4 0.43 10.7 2.6 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Sin3a_C PF16879.5 NODE_63599_length_254_cov_44.506849_g55658_i0reverse_frame_2 - 0.16 11.7 2.3 0.23 11.1 2.3 1.2 1 0 0 1 1 1 0 C-terminal domain of Sin3a protein Sex_peptide PF08138.11 NODE_63598_length_254_cov_47.570776_g55657_i0reverse_frame_3 - 0.13 12.5 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Sex peptide (SP) family Cyclin_C PF02984.19 NODE_63592_length_254_cov_51.689498_g55651_i0reverse_frame_3 - 0.11 12.6 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Cyclin, C-terminal domain TMEM247 PF15444.6 NODE_63592_length_254_cov_51.689498_g55651_i0forward_frame_3 - 0.34 10.9 5.7 0.51 10.4 5.7 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 UPF0254 PF06787.11 NODE_63586_length_254_cov_58.945205_g55645_i0forward_frame_2 - 0.091 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) DUF4734 PF15881.5 NODE_63585_length_254_cov_58.949772_g55644_i0reverse_frame_3 - 0.052 13.7 0.6 0.092 12.9 0.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4734) TMEM187 PF15100.6 NODE_63585_length_254_cov_58.949772_g55644_i0reverse_frame_2 - 0.11 12.0 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 TMEM187 protein family RSN1_TM PF13967.6 NODE_63578_length_254_cov_65.004566_g55637_i0reverse_frame_3 - 0.083 12.6 0.1 0.098 12.4 0.1 1.0 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport TFB6 PF17110.5 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 0.18 11.5 7.1 0.22 11.3 7.1 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF4574 PF15141.6 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 3.4 7.7 8.8 0.48 10.4 4.7 1.7 1 1 1 2 2 2 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Presenilin PF01080.17 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 4.5 5.9 6.4 4.4 6.0 6.4 1.0 1 0 0 1 1 1 0 Presenilin FAM176 PF14851.6 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 4.5 6.9 9.9 5.5 6.7 9.9 1.2 1 0 0 1 1 1 0 FAM176 family Connexin PF00029.19 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 6.8 6.4 7.9 7.2 6.3 7.9 1.2 1 0 0 1 1 1 0 Connexin FA_desaturase PF00487.24 NODE_63566_length_254_cov_91.433790_g55625_i0forward_frame_2 - 4.9 6.9 9.9 5 6.9 9.9 1.2 1 0 0 1 1 1 0 Fatty acid desaturase BA14K PF07886.11 NODE_63563_length_254_cov_102.333333_g55622_i0forward_frame_2 - 0.016 15.0 0.3 0.03 14.2 0.3 1.4 1 0 0 1 1 1 0 BA14K-like protein GASA PF02704.14 NODE_63562_length_254_cov_105.287671_g55621_i0forward_frame_3 - 0.24 11.6 8.9 0.31 11.2 8.9 1.2 1 0 0 1 1 1 0 Gibberellin regulated protein Focadhesin PF11229.8 NODE_63560_length_254_cov_116.050228_g55619_i0reverse_frame_2 - 0.24 9.6 0.0 0.24 9.6 0.0 1.0 1 0 0 1 1 1 0 Focadhesin Nodulin_late PF07127.11 NODE_63557_length_254_cov_130.337900_g55616_i0forward_frame_3 - 0.026 14.9 0.3 0.036 14.4 0.3 1.4 1 1 0 1 1 1 0 Late nodulin protein Ly49 PF08391.10 NODE_63555_length_254_cov_143.780822_g55614_i0forward_frame_2 - 0.017 15.5 0.2 0.021 15.1 0.2 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region DUF3915 PF13054.6 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_2 - 5.7 6.9 11.2 4.7 7.2 10.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_2 - 7.6 4.7 13.9 7.6 4.7 13.9 1.0 1 0 0 1 1 1 0 Atrophin-1 family VEGFR-2_TMD PF17988.1 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_3 - 0.14 11.6 8.9 0.27 10.7 8.9 1.5 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain DUF1761 PF08570.10 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_3 - 0.39 11.0 8.8 0.57 10.5 8.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1761) DUF2905 PF11146.8 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_3 - 1.2 9.3 20.4 0.075 13.2 7.3 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2905) DUF2070 PF09843.9 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_3 - 1.9 6.7 16.7 2.3 6.4 16.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PIF2 PF04631.12 NODE_63553_length_254_cov_155.424658_g55612_i0reverse_frame_2 - 0.19 10.5 0.0 0.23 10.3 0.0 1.1 1 0 0 1 1 1 0 Per os infectivity factor 2 Copper-fist PF00649.18 NODE_63552_length_254_cov_194.397260_g55611_i0reverse_frame_2 - 0.058 12.9 2.2 0.091 12.3 2.2 1.3 1 0 0 1 1 1 0 Copper fist DNA binding domain Melittin PF01372.17 NODE_63539_length_254_cov_2319.242009_g55598_i0forward_frame_2 - 3.2 7.9 5.5 9.2 6.4 0.5 2.4 2 0 0 2 2 2 0 Melittin DUF2723 PF11028.8 NODE_63536_length_254_cov_70553.159817_g55595_i0reverse_frame_3 - 0.087 12.7 3.7 0.097 12.6 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) GCS2 PF04107.13 NODE_63533_length_255_cov_0.881818_g55592_i0reverse_frame_2 - 0.13 11.6 1.0 0.17 11.2 1.0 1.2 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) HEPN-like_int PF18867.1 NODE_63531_length_255_cov_0.950000_g55590_i0reverse_frame_3 - 0.041 13.8 1.3 0.067 13.1 1.3 1.4 1 1 0 1 1 1 0 HEPN-like integron domain TssO PF17561.2 NODE_63531_length_255_cov_0.950000_g55590_i0forward_frame_3 - 0.023 14.8 2.3 0.025 14.7 2.3 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO Stathmin PF00836.19 NODE_63530_length_255_cov_1.009091_g55589_i0reverse_frame_3 - 0.049 13.6 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 Stathmin family DUF4926 PF16277.5 NODE_63521_length_255_cov_1.163636_g55580_i0reverse_frame_3 - 0.07 12.5 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4926) IceA2 PF05862.11 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_3 - 0.15 12.0 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Helicobacter pylori IceA2 protein zf-C2H2_6 PF13912.6 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.00029 20.8 0.3 0.00046 20.1 0.3 1.4 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_4 PF13894.6 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.00073 20.2 1.7 0.0018 19.0 1.7 1.7 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.002 18.3 0.1 0.0037 17.5 0.1 1.5 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding GAGA PF09237.11 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.026 14.3 0.7 0.034 14.0 0.7 1.2 1 0 0 1 1 1 0 GAGA factor zf-ANAPC11 PF12861.7 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.026 14.6 1.9 1.5 8.9 0.1 2.1 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger FYVE PF01363.21 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.026 14.6 4.2 0.032 14.4 4.2 1.2 1 0 0 1 1 1 0 FYVE zinc finger zf-met PF12874.7 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.027 14.9 1.1 0.053 13.9 0.3 1.9 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Rad50_zn_hook PF04423.14 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.12 12.3 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif UBZ_FAAP20 PF15750.5 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.26 11.3 3.5 0.62 10.1 0.2 2.4 3 0 0 3 3 3 0 Ubiquitin-binding zinc-finger DUF108 PF01958.18 NODE_63520_length_255_cov_1.200000_g55579_i0forward_frame_3 - 0.027 14.9 0.2 0.036 14.4 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF108 LRR_4 PF12799.7 NODE_63518_length_255_cov_1.213636_g55577_i0forward_frame_2 - 1.6e-06 28.3 6.8 0.00014 22.2 1.6 2.5 1 1 2 3 3 3 3 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_63518_length_255_cov_1.213636_g55577_i0forward_frame_2 - 0.00019 21.5 3.5 0.1 13.2 0.2 3.4 2 1 0 2 2 2 2 Leucine Rich Repeat LRR_6 PF13516.6 NODE_63518_length_255_cov_1.213636_g55577_i0forward_frame_2 - 0.0002 21.2 7.3 0.016 15.2 0.2 3.9 4 1 0 4 4 4 2 Leucine Rich repeat LRR_8 PF13855.6 NODE_63518_length_255_cov_1.213636_g55577_i0forward_frame_2 - 0.00066 19.4 5.1 0.43 10.4 0.1 2.9 2 1 0 2 2 2 2 Leucine rich repeat PIN_12 PF16289.5 NODE_63514_length_255_cov_1.272727_g55573_i0forward_frame_3 - 0.019 15.4 0.2 0.02 15.4 0.2 1.0 1 0 0 1 1 1 0 PIN domain Glyoxalase_2 PF12681.7 NODE_63514_length_255_cov_1.272727_g55573_i0forward_frame_3 - 0.04 13.8 0.4 0.047 13.6 0.4 1.2 1 0 0 1 1 1 0 Glyoxalase-like domain DUF2897 PF11446.8 NODE_63509_length_255_cov_1.377273_g55568_i0reverse_frame_3 - 0.064 13.2 1.2 0.66 9.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2897) Ion_trans PF00520.31 NODE_63509_length_255_cov_1.377273_g55568_i0forward_frame_3 - 8.4e-12 44.8 3.7 9.7e-12 44.6 3.7 1.0 1 0 0 1 1 1 1 Ion transport protein DUF2393 PF09624.10 NODE_63509_length_255_cov_1.377273_g55568_i0forward_frame_3 - 0.092 12.7 0.4 0.11 12.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) DUF3592 PF12158.8 NODE_63509_length_255_cov_1.377273_g55568_i0forward_frame_3 - 0.31 11.1 0.6 0.41 10.7 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) Ten1 PF12658.7 NODE_63508_length_255_cov_1.381818_g55567_i0forward_frame_3 - 0.038 14.0 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Telomere capping, CST complex subunit DUF3854 PF12965.7 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.0021 18.1 1.3 0.0025 17.8 1.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3854) Stathmin PF00836.19 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.0064 16.5 6.0 0.0077 16.2 6.0 1.1 1 0 0 1 1 1 1 Stathmin family Syntaxin-6_N PF09177.11 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.0089 16.6 1.5 0.011 16.3 1.5 1.2 1 0 0 1 1 1 1 Syntaxin 6, N-terminal Translin PF01997.16 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.023 14.7 1.8 0.026 14.5 1.8 1.0 1 0 0 1 1 1 0 Translin family Histone_HNS PF00816.21 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.027 15.3 2.1 0.027 15.3 2.1 1.6 1 1 1 2 2 2 0 H-NS histone family Allexi_40kDa PF05549.11 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.044 13.3 1.4 0.047 13.2 1.4 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein AIG1 PF04548.16 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.089 12.1 3.0 0.48 9.7 3.0 1.8 1 1 0 1 1 1 0 AIG1 family CotJB PF12652.7 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.12 12.6 0.9 0.15 12.3 0.9 1.1 1 0 0 1 1 1 0 CotJB protein SlyX PF04102.12 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.45 11.2 3.9 2.3 8.9 1.5 2.1 1 1 1 2 2 2 0 SlyX NIF PF03031.18 NODE_63504_length_255_cov_1.440909_g55563_i0reverse_frame_3 - 1.4e-17 63.9 0.4 1.7e-17 63.7 0.4 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase ABC_tran PF00005.27 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 7.1e-08 33.1 0.0 8.2e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 9.3e-06 25.6 0.1 1.1e-05 25.4 0.1 1.2 1 0 0 1 1 1 1 RsgA GTPase NACHT PF05729.12 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.00013 21.9 0.0 0.00017 21.6 0.0 1.1 1 0 0 1 1 1 1 NACHT domain cobW PF02492.19 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.00014 21.5 0.0 0.00018 21.2 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.001 18.7 0.0 0.0011 18.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0015 19.0 0.0 0.0016 18.9 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.002 18.2 0.1 0.0031 17.6 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Septin PF00735.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0025 17.1 0.0 0.0034 16.7 0.0 1.3 1 0 0 1 1 1 1 Septin AAA_29 PF13555.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0032 17.2 0.0 0.0043 16.8 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0034 17.5 0.1 0.0048 17.0 0.1 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain RNA_helicase PF00910.22 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0044 17.4 0.0 0.0062 16.9 0.0 1.3 1 0 0 1 1 1 1 RNA helicase T2SSE PF00437.20 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0044 16.1 0.0 0.0046 16.1 0.0 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein PIF1 PF05970.14 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0056 15.9 0.0 0.0062 15.8 0.0 1.1 1 0 0 1 1 1 1 PIF1-like helicase Zeta_toxin PF06414.12 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.01 15.2 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin IstB_IS21 PF01695.17 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.014 15.1 0.0 0.016 15.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein Roc PF08477.13 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.014 15.6 0.0 0.021 15.1 0.0 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Rad17 PF03215.15 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.016 15.1 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain MobB PF03205.14 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.019 14.8 0.0 0.029 14.3 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.022 15.3 1.0 0.028 14.9 0.4 1.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.022 15.0 0.0 0.026 14.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.027 14.6 0.0 0.037 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.031 14.0 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.038 14.3 0.0 0.046 14.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.038 13.9 0.0 0.05 13.5 0.0 1.2 1 0 0 1 1 1 0 NTPase AAA_18 PF13238.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.041 14.4 0.0 0.065 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.042 13.9 0.0 0.047 13.7 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.047 13.2 0.0 0.05 13.1 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region PRK PF00485.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.053 13.2 0.0 0.069 12.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.059 13.3 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_24 PF13479.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.062 13.0 0.3 0.1 12.3 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_32 PF13654.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.084 11.6 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.085 12.7 0.0 0.094 12.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein PduV-EutP PF10662.9 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.093 12.5 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ATPase_2 PF01637.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.095 12.6 0.0 0.095 12.6 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Ploopntkinase1 PF18748.1 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.097 12.2 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase1 TrwB_AAD_bind PF10412.9 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.11 11.4 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ATP-synt_ab PF00006.25 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.11 12.1 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_28 PF13521.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.12 12.7 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.14 11.5 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family DUF2791 PF10923.8 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.14 11.0 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) AAA_35 PF14516.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.16 10.8 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain POT1PC PF16686.5 NODE_63494_length_255_cov_1.486364_g55553_i0reverse_frame_3 - 0.1 12.4 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 ssDNA-binding domain of telomere protection protein DUF4481 PF14800.6 NODE_63492_length_255_cov_1.531818_g55551_i0reverse_frame_2 - 0.015 14.8 0.3 0.018 14.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) TMPIT PF07851.13 NODE_63487_length_255_cov_1.627273_g55546_i0forward_frame_3 - 0.18 11.0 2.2 0.19 10.9 2.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein DnaT PF17948.1 NODE_63486_length_255_cov_1.627273_g55545_i0reverse_frame_3 - 0.051 13.3 0.0 0.082 12.6 0.0 1.5 1 1 0 1 1 1 0 DnaT DNA-binding domain CcmD PF04995.14 NODE_63486_length_255_cov_1.627273_g55545_i0forward_frame_3 - 4.1 7.6 7.0 6.9 6.8 5.0 2.4 2 1 0 2 2 2 0 Heme exporter protein D (CcmD) DUF333 PF03891.15 NODE_63486_length_255_cov_1.627273_g55545_i0forward_frame_2 - 8.4e-20 70.7 0.1 1e-19 70.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF333) Cas9_PI PF16595.5 NODE_63482_length_255_cov_1.672727_g55541_i0reverse_frame_3 - 0.025 14.4 4.2 0.028 14.3 4.2 1.0 1 0 0 1 1 1 0 PAM-interacting domain of CRISPR-associated endonuclease Cas9 Fimbrial PF00419.20 NODE_63480_length_255_cov_1.727273_g55539_i0forward_frame_3 - 0.0013 19.0 0.2 0.0015 18.9 0.2 1.1 1 0 0 1 1 1 1 Fimbrial protein DUF4581 PF15167.6 NODE_63479_length_255_cov_1.731818_g55538_i0reverse_frame_3 - 0.17 12.1 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4581) Dickkopf_N PF04706.12 NODE_63478_length_255_cov_1.731818_g55537_i0reverse_frame_2 - 0.053 14.0 5.0 0.1 13.1 5.0 1.4 1 0 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region DUF4885 PF16226.5 NODE_63472_length_255_cov_1.813636_g55531_i0reverse_frame_3 - 0.14 11.2 0.1 0.19 10.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4885) DUF809 PF05663.11 NODE_63472_length_255_cov_1.813636_g55531_i0forward_frame_3 - 0.39 10.9 2.7 0.42 10.7 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Glyco_transf_34 PF05637.12 NODE_63471_length_255_cov_1.818182_g55530_i0forward_frame_2 - 0.053 13.2 0.0 0.053 13.2 0.0 1.0 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family DUF5320 PF17253.2 NODE_63470_length_255_cov_1.818182_g55529_i0forward_frame_3 - 0.13 13.3 2.9 0.16 13.0 2.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5320) Transglut_core3 PF13471.6 NODE_63470_length_255_cov_1.818182_g55529_i0forward_frame_2 - 0.31 10.9 4.4 0.37 10.7 4.4 1.2 1 0 0 1 1 1 0 Transglutaminase-like superfamily Ribosomal_L34 PF00468.17 NODE_63469_length_255_cov_1.822727_g55528_i0reverse_frame_3 - 0.11 12.4 0.3 0.11 12.4 0.3 1.8 2 0 0 2 2 2 0 Ribosomal protein L34 CYSTM PF12734.7 NODE_63468_length_255_cov_1.831818_g55527_i0forward_frame_2 - 0.039 14.3 0.0 0.062 13.6 0.0 1.3 1 0 0 1 1 1 0 Cysteine-rich TM module stress tolerance ANAPC5 PF12862.7 NODE_63467_length_255_cov_1.840909_g55526_i0forward_frame_3 - 0.025 14.6 0.4 0.048 13.7 0.2 1.5 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 5 FAM76 PF16046.5 NODE_63466_length_255_cov_1.840909_g55525_i0forward_frame_2 - 0.074 12.4 4.8 0.077 12.3 4.8 1.1 1 0 0 1 1 1 0 FAM76 protein DUF4711 PF15829.5 NODE_63455_length_255_cov_2.072727_g55514_i0reverse_frame_3 - 0.0022 18.0 0.4 0.0026 17.8 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4711) ANTAR PF03861.14 NODE_63449_length_255_cov_2.245455_g55508_i0forward_frame_2 - 0.042 13.7 0.9 0.063 13.1 0.9 1.3 1 0 0 1 1 1 0 ANTAR domain VSG_B PF13206.6 NODE_63449_length_255_cov_2.245455_g55508_i0forward_frame_2 - 0.055 12.7 0.1 0.062 12.6 0.1 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain Flg_hook PF02120.16 NODE_63449_length_255_cov_2.245455_g55508_i0forward_frame_2 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK DUF2357 PF09823.9 NODE_63446_length_255_cov_2.372727_g55505_i0forward_frame_3 - 0.0048 16.2 0.3 0.0058 15.9 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2357) TetR_C_1 PF02909.17 NODE_63445_length_255_cov_2.400000_g55504_i0reverse_frame_2 - 1.4e-14 54.1 0.1 1.5e-14 54.1 0.1 1.0 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain UPF0561 PF10573.9 NODE_63443_length_255_cov_2.404545_g55502_i0reverse_frame_2 - 0.019 15.1 1.6 0.021 14.9 1.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 YcxB PF14317.6 NODE_63442_length_255_cov_2.445455_g55501_i0forward_frame_3 - 0.051 13.3 0.0 0.067 12.9 0.0 1.2 1 0 0 1 1 1 0 YcxB-like protein RuvC_1 PF18516.1 NODE_63442_length_255_cov_2.445455_g55501_i0forward_frame_2 - 0.087 12.0 0.0 0.1 11.7 0.0 1.0 1 0 0 1 1 1 0 RuvC nuclease domain Atypical_Card PF18461.1 NODE_63441_length_255_cov_2.450000_g55500_i0forward_frame_2 - 0.099 12.9 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Atypical caspase recruitment domain DUF4083 PF13314.6 NODE_63438_length_255_cov_2.481818_g55497_i0forward_frame_2 - 0.57 10.2 6.4 0.82 9.7 2.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) CNH PF00780.22 NODE_63434_length_255_cov_2.709091_g55493_i0reverse_frame_2 - 0.029 14.0 0.1 0.029 14.0 0.1 1.0 1 0 0 1 1 1 0 CNH domain Acyl_transf_3 PF01757.22 NODE_63434_length_255_cov_2.709091_g55493_i0forward_frame_2 - 0.00075 18.7 4.7 0.0008 18.6 4.7 1.1 1 0 0 1 1 1 1 Acyltransferase family SLATT_4 PF18186.1 NODE_63431_length_255_cov_2.950000_g55490_i0forward_frame_2 - 0.0044 16.7 1.3 0.0053 16.4 1.3 1.0 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 4 Choline_kin_N PF04428.14 NODE_63430_length_255_cov_3.059091_g55489_i0reverse_frame_3 - 0.21 11.3 0.4 0.31 10.7 0.4 1.4 1 1 0 1 1 1 0 Choline kinase N terminus DUF4118 PF13493.6 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_3 - 0.054 13.3 0.0 0.063 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) Rootletin PF15035.6 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.0019 18.3 1.6 0.0022 18.0 1.6 1.1 1 0 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion Cytochrom_C_2 PF01322.20 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.02 15.8 0.2 0.024 15.5 0.2 1.0 1 0 0 1 1 1 0 Cytochrome C' MIP-T3_C PF17749.1 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.027 14.4 2.9 0.037 14.0 2.8 1.2 1 1 0 1 1 1 0 Microtubule-binding protein MIP-T3 C-terminal region Lipoprotein_20 PF13942.6 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.027 14.4 4.2 0.043 13.7 2.4 1.9 1 1 1 2 2 2 0 YfhG lipoprotein Laminin_II PF06009.12 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.057 13.4 2.3 0.079 13.0 2.3 1.3 1 1 0 1 1 1 0 Laminin Domain II Med9 PF07544.13 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.061 13.4 2.0 2.3 8.4 0.2 2.0 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF1664 PF07889.12 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.11 12.6 3.1 0.21 11.6 3.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.24 11.6 3.0 0.31 11.2 3.0 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Synaptobrevin PF00957.21 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.25 11.2 2.9 0.17 11.7 1.4 1.5 2 0 0 2 2 2 0 Synaptobrevin ThylakoidFormat PF11264.8 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.31 10.7 3.5 0.37 10.4 2.8 1.4 1 1 1 2 2 2 0 Thylakoid formation protein FAM76 PF16046.5 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.63 9.3 4.2 0.7 9.2 4.2 1.0 1 0 0 1 1 1 0 FAM76 protein YtxH PF12732.7 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 3.4 8.3 6.3 2.2 8.8 4.8 1.5 2 0 0 2 2 2 0 YtxH-like protein HHH_6 PF14579.6 NODE_63428_length_255_cov_3.172727_g55487_i0forward_frame_2 - 0.0083 16.4 0.0 0.0092 16.2 0.0 1.1 1 0 0 1 1 1 1 Helix-hairpin-helix motif Peptidase_S49_N PF08496.10 NODE_63425_length_255_cov_3.304545_g55484_i0forward_frame_3 - 0.11 12.5 5.7 0.13 12.3 5.7 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF4519 PF15012.6 NODE_63425_length_255_cov_3.304545_g55484_i0forward_frame_3 - 5.8 7.2 8.9 10 6.4 8.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) AP3D1 PF06375.11 NODE_63425_length_255_cov_3.304545_g55484_i0forward_frame_3 - 7.4 6.8 12.0 9 6.5 12.0 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 BLI1 PF17324.2 NODE_63425_length_255_cov_3.304545_g55484_i0forward_frame_2 - 0.068 13.8 1.7 0.085 13.5 1.7 1.2 1 0 0 1 1 1 0 BLOC-1 interactor 1 MFS_1 PF07690.16 NODE_63422_length_255_cov_3.386364_g55481_i0reverse_frame_2 - 1.3e-05 24.4 0.0 1.3e-05 24.3 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_63422_length_255_cov_3.386364_g55481_i0reverse_frame_2 - 0.0015 17.5 0.0 0.0017 17.3 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter SPC25 PF06703.11 NODE_63422_length_255_cov_3.386364_g55481_i0reverse_frame_2 - 0.072 12.9 0.0 0.088 12.6 0.0 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Carb_kinase PF01256.17 NODE_63421_length_255_cov_3.450000_g55480_i0reverse_frame_3 - 1.6e-25 90.0 0.0 1.7e-25 89.9 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate kinase PGBA_C PF15437.6 NODE_63420_length_255_cov_3.536364_g55479_i0reverse_frame_2 - 0.021 15.2 0.6 0.026 14.9 0.6 1.2 1 0 0 1 1 1 0 Plasminogen-binding protein pgbA C-terminal SBP56 PF05694.11 NODE_63419_length_255_cov_3.563636_g55478_i0reverse_frame_2 - 0.8 8.5 2.1 0.94 8.2 2.1 1.1 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) OrfA PF17495.2 NODE_63419_length_255_cov_3.563636_g55478_i0forward_frame_2 - 0.1 12.8 0.3 0.12 12.6 0.3 1.2 1 0 0 1 1 1 0 Vpr-like OrfA O-antigen_lig PF13425.6 NODE_63418_length_255_cov_3.904545_g55477_i0reverse_frame_3 - 0.35 9.6 2.9 0.38 9.5 2.9 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF2678 PF10856.8 NODE_63418_length_255_cov_3.904545_g55477_i0forward_frame_2 - 3.9 7.4 10.1 6.9 6.6 10.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2678) HPD PF05044.12 NODE_63416_length_255_cov_4.727273_g55475_i0forward_frame_2 - 0.065 13.1 4.1 0.078 12.8 4.1 1.0 1 0 0 1 1 1 0 Homeo-prospero domain AIB PF15334.6 NODE_63415_length_255_cov_4.736364_g55474_i0reverse_frame_2 - 0.14 11.4 0.2 0.14 11.4 0.2 1.1 1 0 0 1 1 1 0 Aurora kinase A and ninein interacting protein TIP41 PF04176.13 NODE_63413_length_255_cov_14.150000_g55472_i0forward_frame_3 - 0.19 11.2 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 TIP41-like family TTL PF03133.15 NODE_63411_length_255_cov_25.022727_g55470_i0forward_frame_3 - 1.2e-11 44.3 0.0 1.5e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Dala_Dala_lig_C PF07478.13 NODE_63411_length_255_cov_25.022727_g55470_i0forward_frame_3 - 0.024 14.2 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus ATPgrasp_YheCD PF14398.6 NODE_63411_length_255_cov_25.022727_g55470_i0forward_frame_3 - 0.046 12.9 0.0 0.062 12.5 0.0 1.1 1 0 0 1 1 1 0 YheC/D like ATP-grasp PPTA PF01239.22 NODE_63410_length_255_cov_30.286364_g55469_i0forward_frame_2 - 0.028 14.2 0.3 0.078 12.7 0.3 1.8 1 0 0 1 1 1 0 Protein prenyltransferase alpha subunit repeat E1_UFD PF09358.10 NODE_63406_length_255_cov_48.345455_g55465_i0forward_frame_2 - 0.058 14.1 0.4 0.061 14.0 0.4 1.2 1 0 0 1 1 1 0 Ubiquitin fold domain YhfC PF10086.9 NODE_63404_length_255_cov_50.518182_g55463_i0reverse_frame_3 - 0.0045 16.4 0.0 0.0047 16.3 0.0 1.0 1 0 0 1 1 1 1 YhfC intramembrane metalloprotease Importin_rep_2 PF18786.1 NODE_63403_length_255_cov_51.250000_g55462_i0forward_frame_2 - 0.051 13.4 0.0 0.075 12.9 0.0 1.3 1 0 0 1 1 1 0 Importin 13 repeat DUF237 PF03072.14 NODE_63402_length_255_cov_51.763636_g55461_i0forward_frame_2 - 0.03 14.3 0.3 0.033 14.2 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF237) Ank_5 PF13857.6 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 2.3e-13 50.1 0.7 5.7e-08 32.9 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 2.5e-11 43.5 0.4 3.2e-07 30.5 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 3.1e-10 40.5 0.1 5e-10 39.8 0.1 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 4.8e-06 27.0 0.0 6.5e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 4.3e-05 23.6 0.0 0.00041 20.6 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeat COMM_domain PF07258.14 NODE_63399_length_255_cov_53.972727_g55458_i0reverse_frame_3 - 0.0082 16.2 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 1 COMM domain RINGv PF12906.7 NODE_63396_length_255_cov_64.954545_g55455_i0forward_frame_3 - 0.0022 18.0 1.2 0.0022 18.0 1.2 2.2 1 1 1 2 2 2 1 RING-variant domain TadE PF07811.12 NODE_63394_length_255_cov_68.227273_g55453_i0forward_frame_2 - 2.5 8.5 7.9 7.7 6.9 7.9 1.9 1 1 0 1 1 1 0 TadE-like protein zf-ANAPC11 PF12861.7 NODE_63381_length_255_cov_124.822727_g55440_i0forward_frame_3 - 0.15 12.1 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger YrvL PF14184.6 NODE_63380_length_255_cov_127.318182_g55439_i0reverse_frame_3 - 0.0066 16.5 0.0 0.0071 16.5 0.0 1.0 1 0 0 1 1 1 1 Regulatory protein YrvL AceK PF06315.11 NODE_63376_length_255_cov_139.618182_g55435_i0forward_frame_3 - 0.11 11.0 0.1 0.12 10.9 0.1 1.0 1 0 0 1 1 1 0 Isocitrate dehydrogenase kinase/phosphatase (AceK) SLM4 PF16818.5 NODE_63375_length_255_cov_141.981818_g55434_i0reverse_frame_3 - 0.0023 17.9 0.9 0.0024 17.9 0.9 1.1 1 0 0 1 1 1 1 Protein SLM4 HcyBio PF01837.16 NODE_63375_length_255_cov_141.981818_g55434_i0reverse_frame_2 - 0.11 11.4 0.4 0.12 11.2 0.4 1.1 1 0 0 1 1 1 0 Homocysteine biosynthesis enzyme, sulfur-incorporation Stealth_CR1 PF17101.5 NODE_63371_length_255_cov_175.659091_g55430_i0forward_frame_3 - 0.32 10.8 0.8 1.6 8.6 0.2 2.0 2 0 0 2 2 2 0 Stealth protein CR1, conserved region 1 DUF1856 PF08983.10 NODE_63369_length_255_cov_191.436364_g55428_i0reverse_frame_3 - 0.46 10.7 4.7 0.44 10.8 3.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF1856) DUF4033 PF13225.6 NODE_63368_length_255_cov_226.936364_g55427_i0reverse_frame_2 - 0.019 14.9 2.6 0.024 14.6 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) IGF2_C PF08365.11 NODE_63366_length_255_cov_286.500000_g55425_i0forward_frame_3 - 0.17 11.9 1.8 0.24 11.5 1.8 1.2 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide Cnd1_N PF12922.7 NODE_63365_length_255_cov_338.472727_g55424_i0forward_frame_3 - 0.064 13.1 0.1 0.077 12.8 0.1 1.0 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term Acyl_transf_3 PF01757.22 NODE_63364_length_255_cov_343.686364_g55423_i0reverse_frame_3 - 0.05 12.6 0.0 0.051 12.6 0.0 1.0 1 0 0 1 1 1 0 Acyltransferase family DUF35_N PF12172.8 NODE_63363_length_255_cov_361.331818_g55422_i0forward_frame_3 - 6.9e-05 22.6 0.8 0.00011 22.0 0.8 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Endonuc_BglI PF14562.6 NODE_63363_length_255_cov_361.331818_g55422_i0forward_frame_3 - 0.2 10.7 0.0 0.22 10.6 0.0 1.0 1 0 0 1 1 1 0 Restriction endonuclease BglI zf-C2H2 PF00096.26 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 2.3e-13 49.8 5.8 3.8e-07 30.2 2.1 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 3.1e-09 36.9 4.8 0.0002 21.9 1.1 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 3.2e-08 33.6 3.6 1.2e-05 25.5 0.2 2.4 2 0 0 2 2 2 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 7.7e-08 32.0 2.5 7.7e-08 32.0 2.5 2.2 2 0 0 2 2 2 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 1.5e-05 25.2 0.3 1.6e-05 25.1 0.3 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.0014 18.4 0.1 0.003 17.3 0.1 1.5 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.0086 16.1 2.0 0.0086 16.1 2.0 2.3 2 1 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_2 PF12756.7 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.018 15.4 2.3 0.026 14.8 0.9 1.8 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-met PF12874.7 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.18 12.3 3.4 1.3 9.5 1.1 3.0 2 2 0 2 2 2 0 Zinc-finger of C2H2 type zf-BED PF02892.15 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.42 10.7 3.9 0.2 11.7 0.7 1.9 1 1 1 2 2 2 0 BED zinc finger Chloroa_b-bind PF00504.21 NODE_63359_length_255_cov_4286.745455_g55418_i0reverse_frame_3 - 4.8e-08 33.7 0.3 5.2e-08 33.6 0.3 1.3 1 1 0 1 1 1 1 Chlorophyll A-B binding protein AXE1 PF05448.12 NODE_63359_length_255_cov_4286.745455_g55418_i0forward_frame_3 - 0.19 10.4 0.0 0.22 10.1 0.0 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) DUF2684 PF10885.8 ORF99930 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) zf-AN1 PF01428.16 ORF99700 - 2e-10 40.7 11.5 2.7e-10 40.3 11.5 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger RPAP2_Rtr1 PF04181.13 ORF99700 - 0.014 15.7 0.4 0.014 15.7 0.4 1.6 2 0 0 2 2 2 0 Rtr1/RPAP2 family Tagatose_6_P_K PF08013.11 ORF99450 - 0.036 12.8 0.0 0.041 12.6 0.0 1.1 1 0 0 1 1 1 0 Tagatose 6 phosphate kinase DUF832 PF05734.11 ORF98565 - 0.032 13.7 0.2 0.032 13.7 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) ArfGap PF01412.18 ORF98277 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Pkinase PF00069.25 ORF97629 - 4.7e-24 85.2 0.8 5.4e-24 85.0 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF97629 - 4.9e-15 55.5 0.2 5.7e-15 55.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF97629 - 8.9e-05 22.2 0.2 0.0001 22.0 0.2 1.0 1 0 0 1 1 1 1 RIO1 family Haspin_kinase PF12330.8 ORF97629 - 0.0037 16.3 0.3 0.0038 16.2 0.3 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Choline_kinase PF01633.20 ORF97629 - 0.0085 15.7 0.3 0.01 15.5 0.3 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 ORF97629 - 0.01 15.8 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF97629 - 0.023 13.5 0.1 0.024 13.4 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase DUF2700 PF10912.8 ORF96768 - 0.012 15.6 0.7 0.013 15.5 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2700) Tetraspanin PF00335.20 ORF96768 - 0.15 11.8 10.0 0.15 11.7 10.0 1.0 1 0 0 1 1 1 0 Tetraspanin family zf-AN1 PF01428.16 ORF96750 - 2e-10 40.7 11.5 2.7e-10 40.3 11.5 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger RPAP2_Rtr1 PF04181.13 ORF96750 - 0.014 15.7 0.4 0.014 15.7 0.4 1.6 2 0 0 2 2 2 0 Rtr1/RPAP2 family DUF3086 PF11285.8 ORF96744 - 0.067 12.3 2.9 0.078 12.1 2.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) PVL_ORF50 PF07768.11 ORF96744 - 0.079 13.3 5.2 0.093 13.1 5.2 1.2 1 0 0 1 1 1 0 PVL ORF-50-like family UPF0239 PF06783.11 ORF96744 - 6.9 6.9 8.7 10 6.4 8.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) HlyD PF00529.20 ORF96742 - 3.1e-09 36.6 0.3 4e-09 36.2 0.3 1.1 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Cytochrome_B PF00033.19 ORF96597 - 0.0071 16.2 1.6 0.0083 16.0 1.6 1.1 1 0 0 1 1 1 1 Cytochrome b/b6/petB DUF2890 PF11081.8 ORF95389 - 0.15 12.2 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) DUF1799 PF08809.11 ORF95133 - 0.14 12.4 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) Ribosomal_S13_N PF08069.12 ORF94873 - 0.07 13.2 0.0 0.095 12.7 0.0 1.3 1 0 0 1 1 1 0 Ribosomal S13/S15 N-terminal domain ArfGap PF01412.18 ORF94732 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Ribosomal_60s PF00428.19 ORF93592 - 10 6.8 11.4 31 5.3 11.4 1.8 1 1 0 1 1 1 0 60s Acidic ribosomal protein DUF4558 PF15104.6 ORF93389 - 0.0071 16.4 0.8 0.0088 16.1 0.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4558) THB PF18362.1 ORF93389 - 0.13 11.9 0.1 0.28 10.8 0.1 1.6 1 1 0 1 1 1 0 Tri-helix bundle domain Vpu PF00558.19 ORF92836 - 0.068 13.0 0.1 0.068 13.0 0.1 1.9 2 0 0 2 2 2 0 Vpu protein ArfGap PF01412.18 ORF92723 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf DUF2684 PF10885.8 ORF91932 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Syntaxin-6_N PF09177.11 ORF9174 - 0.032 14.8 0.1 0.049 14.2 0.1 1.3 1 0 0 1 1 1 0 Syntaxin 6, N-terminal Sp38 PF07354.12 ORF9174 - 0.041 13.3 0.1 0.046 13.1 0.1 1.1 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) Ost5 PF05251.12 ORF91287 - 0.028 14.7 1.5 0.045 14.0 1.5 1.3 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit 5 Cytochrom_C PF00034.21 ORF91136 - 2e-05 25.6 0.0 2.5e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF91136 - 2.8e-05 24.3 0.1 3.6e-05 24.0 0.1 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Ish1 PF10281.9 ORF91136 - 0.31 11.4 3.1 0.34 11.2 1.9 1.7 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein PHB_depo_C PF06850.11 ORF91066 - 0.1 12.1 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 PHB de-polymerase C-terminus Myotub-related PF06602.14 ORF90527 - 3.3e-39 134.8 0.1 3.6e-39 134.7 0.1 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain Y_phosphatase PF00102.27 ORF90527 - 7.2e-05 22.5 0.0 7.5e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.20 ORF90527 - 0.001 18.9 0.0 0.0011 18.8 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 ORF90527 - 0.0061 16.6 0.0 0.0065 16.5 0.0 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase2 PF03162.13 ORF90527 - 0.062 12.9 0.0 0.077 12.6 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family NEXCaM_BD PF16644.5 ORF90502 - 0.014 15.7 1.4 0.015 15.5 1.4 1.2 1 0 0 1 1 1 0 Regulatory region of Na+/H+ exchanger NHE binds to calmodulin cNMP_binding PF00027.29 ORF8985 - 0.00058 19.9 0.0 0.00088 19.3 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain tRNA_synthFbeta PF17759.1 ORF8985 - 0.16 11.4 0.0 0.37 10.2 0.0 1.6 1 1 0 1 1 1 0 Phenylalanyl tRNA synthetase beta chain CLM domain Shisa PF13908.6 ORF89705 - 0.26 11.5 0.7 0.33 11.2 0.7 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator AZUL PF16558.5 ORF89035 - 0.096 12.9 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A Potex_coat PF06184.11 ORF88659 - 0.0084 15.7 0.0 0.0094 15.5 0.0 1.1 1 0 0 1 1 1 1 Potexvirus coat protein PRAS PF15798.5 ORF88259 - 0.085 13.4 0.0 0.095 13.3 0.0 1.1 1 0 0 1 1 1 0 Proline-rich AKT1 substrate 1 CRAL_TRIO PF00650.20 ORF87988 - 1.2e-08 34.9 0.0 1.2e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain GDE_N PF12439.8 ORF87797 - 0.19 11.1 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme N terminal DUF3367 PF11847.8 ORF87124 - 0.068 11.0 0.0 0.068 11.0 0.0 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase PSI_8 PF00796.18 ORF87040 - 0.31 10.9 1.4 0.52 10.2 1.4 1.3 1 0 0 1 1 1 0 Photosystem I reaction centre subunit VIII Dymeclin PF09742.9 ORF86859 - 0.042 12.3 0.4 0.043 12.2 0.4 1.0 1 0 0 1 1 1 0 Dyggve-Melchior-Clausen syndrome protein DNA_meth_N PF18284.1 ORF85972 - 0.12 12.3 0.0 0.24 11.3 0.0 1.6 1 1 0 1 1 1 0 DNA methylase N-terminal domain zf-C2H2 PF00096.26 ORF85972 - 1.4 9.5 3.9 9.7 6.9 1.2 3.1 2 2 1 3 3 3 0 Zinc finger, C2H2 type Crust_neurohorm PF01147.17 ORF84453 - 0.043 13.6 0.2 0.066 13.0 0.2 1.3 1 0 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family SNRNP27 PF08648.12 ORF83840 - 0.1 12.7 4.6 0.084 13.0 2.4 1.9 1 1 1 2 2 2 0 U4/U6.U5 small nuclear ribonucleoproteins DUF3198 PF11433.8 ORF83840 - 0.15 12.0 2.8 8.6 6.3 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3198) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks287.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks287.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks287.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks287.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ArfGap PF01412.18 ORF82505 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf RTC PF01137.21 ORF8211 - 4.8e-11 42.3 0.0 5e-11 42.2 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase Aa_trans PF01490.18 ORF81752 - 0.06 12.0 1.2 0.062 12.0 1.2 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Cytochrome_B PF00033.19 ORF80177 - 0.0071 16.2 1.6 0.0083 16.0 1.6 1.1 1 0 0 1 1 1 1 Cytochrome b/b6/petB Potex_coat PF06184.11 ORF79507 - 0.0084 15.7 0.0 0.0094 15.5 0.0 1.1 1 0 0 1 1 1 1 Potexvirus coat protein Astro_capsid_p PF12226.8 ORF79443 - 0.015 14.5 0.1 0.015 14.5 0.1 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein SSXRD PF09514.10 ORF79443 - 0.061 12.9 0.4 0.061 12.9 0.4 1.8 2 0 0 2 2 2 0 SSXRD motif YpM PF09144.10 ORF79443 - 0.079 13.1 0.1 0.084 13.0 0.1 1.1 1 0 0 1 1 1 0 Yersinia pseudo-tuberculosis mitogen DUF5345 PF17280.2 ORF79177 - 0.18 11.8 3.6 0.35 10.9 3.6 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5345) UPF0258 PF06789.12 ORF79177 - 0.77 9.9 2.4 0.95 9.6 2.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0258) Calcyon PF06387.11 ORF79177 - 2.6 8.0 4.6 1.4 8.9 2.9 1.3 1 1 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) DHHC PF01529.20 ORF79177 - 7 6.8 9.5 7.5 6.7 9.5 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase Cytochrome_B PF00033.19 ORF78871 - 0.0071 16.2 1.6 0.0083 16.0 1.6 1.1 1 0 0 1 1 1 1 Cytochrome b/b6/petB UL73_N PF12522.8 ORF78275 - 1.8 8.4 7.5 7.3 6.4 1.3 2.4 2 0 0 2 2 2 0 Cytomegalovirus glycoprotein N terminal Glutaminase PF04960.15 ORF77668 - 0.012 14.8 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 Glutaminase TPR_MLP1_2 PF07926.12 ORF76171 - 0.00038 20.5 6.0 0.00046 20.3 6.0 1.0 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein PspA_IM30 PF04012.12 ORF76171 - 0.003 17.2 8.8 0.0032 17.1 8.8 1.0 1 0 0 1 1 1 1 PspA/IM30 family EzrA PF06160.12 ORF76171 - 0.048 11.8 2.9 0.05 11.8 2.9 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA DUF1828 PF08861.10 ORF76171 - 0.087 13.1 0.1 0.098 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF1828 Cep57_MT_bd PF06657.13 ORF76171 - 0.11 12.9 4.7 2.1 8.8 1.5 2.1 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 PEARLI-4 PF05278.12 ORF76171 - 1.4 8.5 5.6 1.6 8.3 5.6 1.0 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) TRP PF06011.12 ORF75877 - 0.042 12.6 1.9 0.041 12.6 1.9 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel GWT1 PF06423.12 ORF75877 - 0.066 13.3 0.9 0.074 13.2 0.9 1.0 1 0 0 1 1 1 0 GWT1 Clostridium_P47 PF06597.11 ORF75877 - 0.11 11.2 0.4 0.13 11.0 0.4 1.0 1 0 0 1 1 1 0 Clostridium P-47 protein TMEM154 PF15102.6 ORF75877 - 0.15 11.9 0.0 0.15 11.9 0.0 1.4 2 0 0 2 2 2 0 TMEM154 protein family SRP_TPR_like PF17004.5 ORF75808 - 0.062 13.3 0.4 0.079 13.0 0.4 1.2 1 0 0 1 1 1 0 Putative TPR-like repeat Peptidase_S11 PF00768.20 ORF75765 - 5.8e-05 22.6 0.0 6.7e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase NADH_dh_m_C1 PF15088.6 ORF7548 - 0.12 12.0 0.2 0.19 11.4 0.2 1.3 1 0 0 1 1 1 0 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial Prok-E2_B PF14461.6 ORF75298 - 0.042 13.5 0.0 0.054 13.2 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family B CxxCxxCC PF03692.15 ORF7465 - 1e-06 29.4 5.2 2.9e-06 27.9 5.2 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain RESP18 PF14948.6 ORF74460 - 0.061 13.6 0.0 0.07 13.4 0.0 1.1 1 0 0 1 1 1 0 RESP18 domain SLATT_5 PF18160.1 ORF7403 - 8.6 5.6 9.5 0.97 8.7 2.1 2.0 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 DUF4649 PF15507.6 ORF73971 - 0.032 14.2 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4649) MLTR_LBD PF17765.1 ORF73940 - 0.091 12.9 0.2 0.11 12.6 0.2 1.1 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain Chitin_synth_1 PF01644.17 ORF73115 - 0.095 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Chitin synthase Tetraspanin PF00335.20 ORF7256 - 0.017 14.8 0.2 0.019 14.7 0.2 1.0 1 0 0 1 1 1 0 Tetraspanin family CRA PF06589.11 ORF7256 - 0.018 15.1 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) DND1_DSRM PF14709.7 ORF7256 - 0.064 13.5 0.1 0.081 13.2 0.1 1.1 1 0 0 1 1 1 0 double strand RNA binding domain from DEAD END PROTEIN 1 DUF4131 PF13567.6 ORF7256 - 0.082 12.6 0.0 0.084 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Ac76 PF05814.11 ORF7256 - 0.091 12.8 0.2 0.1 12.6 0.2 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) Merozoite_SPAM PF07133.11 ORF72498 - 0.0026 17.8 0.2 0.0029 17.6 0.2 1.0 1 0 0 1 1 1 1 Merozoite surface protein (SPAM) zf-RING_7 PF02591.15 ORF72185 - 0.09 13.0 3.8 0.95 9.7 0.1 2.3 2 0 0 2 2 2 0 C4-type zinc ribbon domain zf-C2HC5 PF06221.13 ORF72185 - 0.76 9.8 7.8 0.76 9.8 0.6 2.4 2 1 0 2 2 2 0 Putative zinc finger motif, C2HC5-type WD40 PF00400.32 ORF72137 - 8.6e-10 39.1 0.1 0.0001 23.0 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF72137 - 0.018 15.3 0.0 0.033 14.5 0.0 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain DUF5018 PF16410.5 ORF72137 - 0.11 11.2 0.1 0.11 11.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5018) Abhydrolase_1 PF00561.20 ORF71991 - 9.9e-07 28.7 0.1 1.1e-06 28.5 0.1 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Colicin_Ia PF11504.8 ORF71991 - 0.1 12.7 0.1 0.23 11.6 0.0 1.5 2 0 0 2 2 2 0 Colicin Ia Rrp44_S1 PF17215.3 ORF71608 - 0.043 13.8 0.0 0.046 13.7 0.0 1.1 1 0 0 1 1 1 0 S1 domain CRISPR_Cse1 PF09481.10 ORF71601 - 0.048 12.7 0.0 0.048 12.7 0.0 1.0 1 0 0 1 1 1 0 CRISPR-associated protein Cse1 (CRISPR_cse1) Astro_capsid_p PF12226.8 ORF7095 - 0.015 14.5 0.1 0.015 14.5 0.1 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein SSXRD PF09514.10 ORF7095 - 0.061 12.9 0.4 0.061 12.9 0.4 1.8 2 0 0 2 2 2 0 SSXRD motif YpM PF09144.10 ORF7095 - 0.079 13.1 0.1 0.084 13.0 0.1 1.1 1 0 0 1 1 1 0 Yersinia pseudo-tuberculosis mitogen LpxK PF02606.14 ORF70541 - 0.079 12.0 0.4 0.089 11.9 0.4 1.0 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase Fer2 PF00111.27 ORF70454 - 1.3e-10 41.0 2.6 1.5e-10 40.9 2.6 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 ORF70454 - 0.022 14.8 0.7 0.035 14.1 0.6 1.4 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain UK PF02512.14 ORF70454 - 0.084 13.4 0.3 0.096 13.2 0.3 1.2 1 0 0 1 1 1 0 Virulence determinant Pox_A14 PF05767.12 ORF70326 - 3 8.1 9.0 3.8 7.7 0.6 2.1 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 La PF05383.17 ORF70319 - 1.8e-21 75.9 1.5 2.6e-21 75.4 1.5 1.3 1 0 0 1 1 1 1 La domain DUF45 PF01863.17 ORF70319 - 0.076 13.1 0.3 0.077 13.0 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF45 Arg_tRNA_synt_N PF03485.16 ORF70289 - 0.0032 18.0 0.0 0.0038 17.8 0.0 1.2 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain Rad21_Rec8 PF04824.16 ORF70092 - 0.074 12.4 0.1 0.11 11.8 0.1 1.4 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein IBR PF01485.21 ORF69937 - 3.7e-07 30.3 7.9 5.1e-07 29.8 7.9 1.4 1 1 0 1 1 1 1 IBR domain, a half RING-finger domain zf-Nse PF11789.8 ORF69937 - 0.044 13.6 0.7 0.044 13.6 0.7 1.9 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit HIPIP PF01355.17 ORF69937 - 0.054 13.8 3.1 0.073 13.4 3.1 1.3 1 0 0 1 1 1 0 High potential iron-sulfur protein ADAM_CR_2 PF17771.1 ORF6938 - 0.088 13.3 0.1 0.12 12.9 0.1 1.2 1 0 0 1 1 1 0 ADAM cysteine-rich domain DUF4224 PF13986.6 ORF69298 - 0.1 12.5 0.0 0.25 11.3 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) ESR1_C PF12743.7 ORF69073 - 0.072 12.9 0.5 0.15 11.9 0.5 1.6 1 0 0 1 1 1 0 Oestrogen-type nuclear receptor final C-terminal RIIa PF02197.17 ORF6900 - 0.14 11.8 1.3 0.2 11.4 0.0 1.9 2 0 0 2 2 2 0 Regulatory subunit of type II PKA R-subunit DUF2684 PF10885.8 ORF68557 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) UPF0515 PF15135.6 ORF67926 - 0.076 12.4 0.3 0.077 12.3 0.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 cNMP_binding PF00027.29 ORF66570 - 0.00058 19.9 0.0 0.0008 19.4 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain LPD13 PF18825.1 ORF66570 - 0.04 13.7 0.0 0.056 13.2 0.0 1.3 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 13 AAA_25 PF13481.6 ORF65643 - 0.044 13.4 0.0 0.051 13.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain ANATO PF01821.18 ORF65471 - 1.1 10.2 7.3 7.3 7.5 2.2 3.0 2 1 1 3 3 3 0 Anaphylotoxin-like domain ATG16 PF08614.11 ORF65255 - 0.00081 19.7 2.3 0.00089 19.5 2.3 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) CEP63 PF17045.5 ORF65255 - 0.00088 19.3 2.1 0.00094 19.2 2.1 1.1 1 0 0 1 1 1 1 Centrosomal protein of 63 kDa Tropomyosin PF00261.20 ORF65255 - 0.0013 18.1 4.6 0.0014 18.1 4.6 1.0 1 0 0 1 1 1 1 Tropomyosin DUF4618 PF15397.6 ORF65255 - 0.0041 16.6 3.5 0.0051 16.3 3.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) TACC_C PF05010.14 ORF65255 - 0.0047 16.7 2.8 0.0058 16.4 2.8 1.0 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal TMF_DNA_bd PF12329.8 ORF65255 - 0.0059 16.6 5.5 0.0074 16.3 5.5 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding BRE1 PF08647.11 ORF65255 - 0.015 15.4 3.9 0.018 15.1 3.9 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase DASH_Hsk3 PF08227.11 ORF65255 - 0.025 14.9 0.4 0.087 13.2 0.1 2.0 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like DHR10 PF18595.1 ORF65255 - 0.026 14.6 5.0 0.029 14.4 4.4 1.4 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain Fez1 PF06818.15 ORF65255 - 0.046 14.2 3.4 0.049 14.1 3.4 1.0 1 0 0 1 1 1 0 Fez1 DUF1515 PF07439.11 ORF65255 - 0.17 11.9 1.6 0.2 11.7 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) TMPIT PF07851.13 ORF65255 - 0.23 10.7 3.2 0.25 10.6 3.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein RTC PF01137.21 ORF64029 - 4.8e-11 42.3 0.0 5e-11 42.2 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase TEX12 PF15219.6 ORF63838 - 0.008 16.5 0.0 0.01 16.1 0.0 1.2 1 0 0 1 1 1 1 Testis-expressed 12 MetOD1 PF18546.1 ORF63726 - 0.072 13.1 0.4 0.077 13.0 0.4 1.1 1 0 0 1 1 1 0 Metanogen output domain 1 Asp5 PF17000.5 ORF63354 - 0.29 11.3 1.1 0.43 10.8 1.1 1.2 1 0 0 1 1 1 0 Accessory secretory protein Sec, Asp5 MatE PF01554.18 ORF61277 - 0.022 14.4 0.0 0.029 14.0 0.0 1.1 1 0 0 1 1 1 0 MatE zf-AN1 PF01428.16 ORF61148 - 2e-10 40.7 11.5 2.7e-10 40.3 11.5 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger RPAP2_Rtr1 PF04181.13 ORF61148 - 0.014 15.7 0.4 0.014 15.7 0.4 1.6 2 0 0 2 2 2 0 Rtr1/RPAP2 family Csm1_N PF18504.1 ORF61000 - 0.00074 19.8 0.7 0.0015 18.8 0.6 1.6 1 1 0 1 1 1 1 Csm1 N-terminal domain Troponin PF00992.20 ORF61000 - 0.0043 17.4 2.5 0.005 17.1 2.5 1.2 1 0 0 1 1 1 1 Troponin ATG16 PF08614.11 ORF61000 - 0.011 15.9 10.9 0.012 15.8 10.9 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) ADIP PF11559.8 ORF61000 - 0.012 15.8 5.2 0.012 15.8 5.2 1.3 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 ORF61000 - 0.02 14.2 8.1 0.02 14.2 8.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Cluap1 PF10234.9 ORF61000 - 0.021 14.2 6.5 0.024 14.1 6.5 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 Spc42p PF11544.8 ORF61000 - 0.022 14.7 0.1 0.037 14.0 0.1 1.5 1 0 0 1 1 1 0 Spindle pole body component Spc42p PI3K_P85_iSH2 PF16454.5 ORF61000 - 0.025 14.2 4.5 0.026 14.1 4.5 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain CENP-Q PF13094.6 ORF61000 - 0.053 13.7 5.9 0.038 14.2 4.0 1.6 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit HALZ PF02183.18 ORF61000 - 0.09 13.0 4.1 0.11 12.8 0.5 2.5 2 2 0 2 2 2 0 Homeobox associated leucine zipper JIP_LZII PF16471.5 ORF61000 - 0.15 12.3 3.1 0.18 12.0 2.5 1.5 1 1 0 1 1 1 0 JNK-interacting protein leucine zipper II DUF2458 PF10454.9 ORF61000 - 0.2 11.3 5.8 0.28 10.8 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2458) DivIC PF04977.15 ORF61000 - 1.8 8.4 6.3 0.34 10.7 2.1 1.9 1 1 1 2 2 2 0 Septum formation initiator DUF2733 PF10813.8 ORF6089 - 0.033 13.9 2.7 0.089 12.6 1.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) DUF3836 PF12930.7 ORF60736 - 0.022 14.5 3.0 0.028 14.2 3.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF3836) DUF5426 PF17473.2 ORF60736 - 0.038 14.3 0.3 0.044 14.1 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5426) FixS PF03597.15 ORF60736 - 0.093 12.5 0.3 0.15 11.8 0.0 1.4 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type 3-alpha PF03475.14 ORF60591 - 0.044 13.6 1.0 0.11 12.4 0.1 2.0 2 0 0 2 2 2 0 3-alpha domain Bul1_C PF04426.12 ORF59764 - 0.027 13.9 0.2 0.027 13.9 0.2 1.1 1 0 0 1 1 1 0 Bul1 C terminus Smac_DIABLO PF09057.10 ORF59712 - 0.054 12.9 0.3 0.064 12.6 0.3 1.1 1 0 0 1 1 1 0 Second Mitochondria-derived Activator of Caspases Cwf_Cwc_15 PF04889.12 ORF59643 - 0.017 14.9 8.7 0.02 14.6 8.7 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein PGA2 PF07543.12 ORF59643 - 0.018 15.0 1.1 0.019 14.9 1.1 1.1 1 0 0 1 1 1 0 Protein trafficking PGA2 TRAP_alpha PF03896.16 ORF59643 - 0.13 11.4 1.8 0.14 11.3 1.8 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Pes-10 PF07149.11 ORF59643 - 0.16 11.0 7.1 0.18 10.8 7.1 1.0 1 0 0 1 1 1 0 Pes-10 DUF2457 PF10446.9 ORF59643 - 0.81 8.8 8.7 0.82 8.8 8.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) NOA36 PF06524.12 ORF59643 - 2.4 7.4 8.0 2.6 7.3 8.0 1.1 1 0 0 1 1 1 0 NOA36 protein DNA_pol_phi PF04931.13 ORF59643 - 6.8 4.7 10.3 7.1 4.6 10.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi DUF2684 PF10885.8 ORF59124 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) NADH_dh_m_C1 PF15088.6 ORF59001 - 0.0078 15.8 0.2 0.013 15.1 0.2 1.3 1 0 0 1 1 1 1 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial RE_XcyI PF09571.10 ORF58766 - 0.022 14.0 0.0 0.025 13.8 0.0 1.0 1 0 0 1 1 1 0 XcyI restriction endonuclease TRP PF06011.12 ORF58502 - 0.018 13.8 2.2 0.022 13.5 2.2 1.2 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF3099 PF11298.8 ORF58502 - 0.061 13.5 2.4 0.085 13.0 2.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) CCER1 PF15482.6 ORF58302 - 0.0086 16.0 3.5 0.0098 15.8 3.5 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing glutamate-rich protein family 1 DUF4378 PF14309.6 ORF57533 - 0.003 18.0 0.3 0.003 18.0 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4378) MLTR_LBD PF17765.1 ORF56851 - 0.091 12.9 0.2 0.11 12.6 0.2 1.1 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain DUF2684 PF10885.8 ORF56357 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) FA_hydroxylase PF04116.13 ORF56355 - 0.041 14.2 1.4 0.044 14.1 1.4 1.1 1 0 0 1 1 1 0 Fatty acid hydroxylase superfamily Nudc_N PF14050.6 ORF56355 - 0.061 13.3 0.1 0.079 13.0 0.1 1.2 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. Arrestin_N PF00339.29 ORF56247 - 5.8e-05 23.2 0.0 6.2e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain MMTV_SAg PF01054.17 ORF56145 - 0.16 11.5 0.1 0.19 11.2 0.1 1.1 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen FAD_binding_3 PF01494.19 ORF55543 - 0.062 12.5 0.0 0.074 12.3 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain CxC6 PF18721.1 ORF55494 - 0.038 14.3 1.9 0.051 13.8 1.9 1.4 1 1 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases zf-MYND PF01753.18 ORF5539 - 0.0014 18.7 1.2 0.0021 18.1 1.2 1.2 1 0 0 1 1 1 1 MYND finger Creatininase PF02633.14 ORF55377 - 0.057 12.9 0.0 0.059 12.8 0.0 1.0 1 0 0 1 1 1 0 Creatinine amidohydrolase SNRNP27 PF08648.12 ORF55075 - 0.13 12.4 5.6 0.12 12.5 2.9 2.0 1 1 1 2 2 2 0 U4/U6.U5 small nuclear ribonucleoproteins DUF5398 PF17376.2 ORF54499 - 0.00075 20.1 0.2 0.001 19.6 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5398) UPF0449 PF15136.6 ORF54499 - 0.024 15.1 0.2 0.027 14.9 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 Arginase PF00491.21 ORF54236 - 0.00042 19.9 0.0 0.00047 19.8 0.0 1.0 1 0 0 1 1 1 1 Arginase family Cas_St_Csn2 PF16813.5 ORF52842 - 0.0041 16.3 0.3 0.0048 16.1 0.3 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Csn2 subfamily St NES_C_h PF18208.1 ORF52842 - 0.024 14.9 0.3 0.037 14.3 0.2 1.4 1 1 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain IBR PF01485.21 ORF52653 - 3.7e-07 30.3 7.9 5.1e-07 29.8 7.9 1.4 1 1 0 1 1 1 1 IBR domain, a half RING-finger domain zf-Nse PF11789.8 ORF52653 - 0.044 13.6 0.7 0.044 13.6 0.7 1.9 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit HIPIP PF01355.17 ORF52653 - 0.054 13.8 3.1 0.073 13.4 3.1 1.3 1 0 0 1 1 1 0 High potential iron-sulfur protein DUF1324 PF07038.11 ORF5240 - 0.065 13.5 0.0 0.09 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1324) HARP PF07443.13 ORF5240 - 0.11 12.2 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 HepA-related protein (HARP) Pro-NT_NN PF07421.11 ORF51986 - 0.0076 16.5 0.3 0.0083 16.4 0.3 1.0 1 0 0 1 1 1 1 Neurotensin/neuromedin N precursor Ribosomal_L15e PF00827.17 ORF51986 - 0.029 14.1 1.4 0.046 13.4 1.4 1.4 1 1 0 1 1 1 0 Ribosomal L15 TauD PF02668.16 ORF51729 - 1.1e-08 35.3 0.1 1.2e-08 35.1 0.1 1.1 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family CsiD PF08943.10 ORF51729 - 0.0028 16.8 0.0 0.0033 16.6 0.0 1.0 1 0 0 1 1 1 1 CsiD Cytochrome_B PF00033.19 ORF51717 - 0.0071 16.2 1.6 0.0083 16.0 1.6 1.1 1 0 0 1 1 1 1 Cytochrome b/b6/petB DUF5571 PF17732.1 ORF50613 - 0.047 13.1 4.6 0.055 12.9 4.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5571) UbiA PF01040.18 ORF50551 - 0.02 14.2 2.6 0.022 14.1 2.6 1.0 1 0 0 1 1 1 0 UbiA prenyltransferase family DUF4131 PF13567.6 ORF50551 - 0.043 13.5 8.9 0.052 13.2 8.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) TMEM154 PF15102.6 ORF50551 - 0.1 12.5 0.5 0.12 12.3 0.5 1.1 1 0 0 1 1 1 0 TMEM154 protein family Shisa PF13908.6 ORF50442 - 0.26 11.5 0.7 0.33 11.2 0.7 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Phage_Capsid_P3 PF09018.11 ORF50318 - 0.13 11.0 5.0 0.15 10.9 5.0 1.0 1 0 0 1 1 1 0 P3 major capsid protein SCHIP-1 PF10148.9 ORF50318 - 2 8.0 9.4 2.2 7.8 9.4 1.1 1 0 0 1 1 1 0 Schwannomin-interacting protein 1 DUF2684 PF10885.8 ORF50133 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) DUF3399 PF11879.8 ORF50069 - 0.4 11.0 3.4 0.5 10.7 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) Transgly_assoc PF04226.13 ORF49971 - 7.5e-14 51.7 14.1 7.5e-14 51.7 14.1 2.1 2 0 0 2 2 2 1 Transglycosylase associated protein DUF983 PF06170.12 ORF49971 - 0.029 14.8 0.5 0.044 14.2 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF983) DUF5518 PF17647.1 ORF49971 - 0.09 12.9 20.1 0.11 12.7 20.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5518) SLATT_fungal PF18142.1 ORF49971 - 4.2 7.4 5.2 6.2 6.8 4.0 1.9 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain DUF4896 PF16237.5 ORF49572 - 2.1 8.3 7.5 0.1 12.4 2.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4896) DUF2684 PF10885.8 ORF49001 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) DSPc PF00782.20 ORF48456 - 2.1e-13 50.2 0.1 2.2e-13 50.2 0.1 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF48456 - 9.6e-05 22.1 0.1 9.6e-05 22.1 0.1 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PKcGMP_CC PF16808.5 ORF46704 - 1.2 9.1 10.9 0.093 12.6 4.7 2.2 2 1 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase PDDEXK_9 PF08011.11 ORF45661 - 0.053 13.4 0.5 0.07 13.0 0.5 1.4 1 1 0 1 1 1 0 PD-(D/E)XK nuclease superfamily DUF5494 PF17598.2 ORF45661 - 0.098 12.8 1.2 0.11 12.7 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5494) DUF4337 PF14235.6 ORF45661 - 0.23 11.6 2.2 0.23 11.6 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Baculo_E56 PF04639.12 ORF45314 - 0.11 11.7 1.2 0.12 11.6 1.2 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope LYRIC PF15686.5 ORF44980 - 0.42 10.1 12.1 0.44 10.0 12.1 1.1 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family RRM_1 PF00076.22 ORF44911 - 0.085 12.7 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ribosomal_S17 PF00366.20 ORF448 - 1.6e-34 117.8 1.2 1.9e-34 117.6 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 MitoNEET_N PF10660.9 ORF44476 - 4.3 7.4 7.1 6.2 6.9 1.1 2.2 2 0 0 2 2 2 0 Iron-containing outer mitochondrial membrane protein N-terminus JTB PF05439.12 ORF44476 - 7.6 6.6 9.2 0.62 10.1 0.6 2.0 1 1 1 2 2 2 0 Jumping translocation breakpoint protein (JTB) Hydantoinase_B PF02538.14 ORF44356 - 0.1 11.0 0.0 0.12 10.8 0.0 1.0 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase DUF2684 PF10885.8 ORF44110 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) WLM PF08325.10 ORF43417 - 0.032 14.3 0.2 0.036 14.1 0.2 1.2 1 0 0 1 1 1 0 WLM domain AUDH_Cupin PF18637.1 ORF43280 - 0.062 13.3 0.8 0.069 13.2 0.6 1.3 1 1 0 1 1 1 0 Aldos-2-ulose dehydratase/isomerase (AUDH) Cupin domain CHS5_N PF16892.5 ORF43273 - 9.3e-05 22.3 0.0 0.00012 21.9 0.0 1.1 1 0 0 1 1 1 1 Chitin biosynthesis protein CHS5 N-terminus VGCC_alpha2 PF08473.11 ORF43152 - 0.03 13.1 0.0 0.036 12.8 0.0 1.1 1 0 0 1 1 1 0 Neuronal voltage-dependent calcium channel alpha 2acd Rhamnogal_lyase PF06045.11 ORF42334 - 0.059 12.8 0.1 0.061 12.7 0.1 1.1 1 0 0 1 1 1 0 Rhamnogalacturonate lyase family zf-AN1 PF01428.16 ORF41884 - 2e-10 40.7 11.5 2.7e-10 40.3 11.5 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger RPAP2_Rtr1 PF04181.13 ORF41884 - 0.014 15.7 0.4 0.014 15.7 0.4 1.6 2 0 0 2 2 2 0 Rtr1/RPAP2 family Arm-DNA-bind_3 PF13356.6 ORF41567 - 0.097 13.1 0.1 9.5 6.7 0.0 2.1 1 1 1 2 2 2 0 Arm DNA-binding domain Pkinase PF00069.25 ORF41211 - 1.6e-13 50.7 0.9 1.8e-13 50.4 0.9 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41211 - 4.6e-09 35.9 0.3 4.9e-09 35.9 0.3 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1730 PF08331.10 ORF40965 - 0.1 12.6 0.1 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1730) UCH PF00443.29 ORF40819 - 8.7e-16 58.2 3.8 9.4e-16 58.1 3.8 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase HECT PF00632.25 ORF40391 - 1.3e-09 38.0 0.0 1.4e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) RTP1_C2 PF10304.9 ORF40391 - 0.12 12.1 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 2 MVL PF12151.8 ORF40098 - 0.12 12.2 1.4 0.34 10.8 0.2 2.2 2 0 0 2 2 2 0 Mannan-binding protein Enolase_like_N PF18374.1 ORF3972 - 0.1 12.0 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 Enolase N-terminal domain-like HigB_toxin PF09907.9 ORF39162 - 0.019 15.2 2.9 0.12 12.6 0.6 2.2 1 1 1 2 2 2 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system TTL PF03133.15 ORF38980 - 2e-07 30.4 0.1 2.1e-07 30.3 0.1 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family FbpC_C_terminal PF17845.1 ORF38385 - 0.2 11.8 0.1 0.33 11.1 0.1 1.3 1 0 0 1 1 1 0 FbpC C-terminal regulatory nucleotide binding domain TOM13 PF08219.11 ORF38276 - 0.083 12.9 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Outer membrane protein TOM13 MMTV_SAg PF01054.17 ORF37619 - 0.16 11.5 0.1 0.19 11.2 0.1 1.1 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen DUF2684 PF10885.8 ORF37322 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) ZZ PF00569.17 ORF3708 - 1.9 8.4 6.4 0.15 11.9 1.9 1.5 2 0 0 2 2 2 0 Zinc finger, ZZ type HAD_SAK_2 PF18143.1 ORF36530 - 1.5e-08 35.1 0.0 1.8e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins Arc_PepC PF06819.11 ORF36530 - 0.11 12.7 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminal Domain CEP44 PF15007.6 ORF36119 - 0.034 14.3 0.2 0.044 14.0 0.2 1.3 1 1 0 1 1 1 0 Centrosomal spindle body, CEP44 PHB_depo_C PF06850.11 ORF35985 - 0.1 12.1 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 PHB de-polymerase C-terminus Smg4_UPF3 PF03467.15 ORF35565 - 0.0047 17.0 0.1 0.005 16.9 0.1 1.2 1 0 0 1 1 1 1 Smg-4/UPF3 family Hydrolase_like PF13242.6 ORF35378 - 5.2e-10 39.2 0.0 1e-09 38.3 0.0 1.5 2 0 0 2 2 2 1 HAD-hyrolase-like HAD_2 PF13419.6 ORF35378 - 5e-05 23.5 0.0 6e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Cytochrome_CBB3 PF13442.6 ORF35022 - 0.016 15.5 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III MSL1_dimer PF16801.5 ORF34574 - 2.1 8.2 8.3 1.5 8.6 6.3 1.7 2 0 0 2 2 2 0 Dimerisation domain of Male-specific-Lethal 1 LMBR1 PF04791.16 ORF34267 - 0.019 13.9 0.6 0.023 13.6 0.6 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Solute_trans_a PF03619.16 ORF33907 - 0.043 13.3 0.0 0.043 13.3 0.0 1.0 1 0 0 1 1 1 0 Organic solute transporter Ostalpha zf-AN1 PF01428.16 ORF33815 - 2e-10 40.7 11.5 2.7e-10 40.3 11.5 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger RPAP2_Rtr1 PF04181.13 ORF33815 - 0.014 15.7 0.4 0.014 15.7 0.4 1.6 2 0 0 2 2 2 0 Rtr1/RPAP2 family ArfGap PF01412.18 ORF33216 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf KAAG1 PF15354.6 ORF33141 - 0.1 13.2 0.5 0.13 12.8 0.5 1.1 1 0 0 1 1 1 0 Kidney-associated antigen 1 Usp PF00582.26 ORF33052 - 5e-18 66.0 0.3 5.3e-18 65.9 0.3 1.0 1 0 0 1 1 1 1 Universal stress protein family Ribosomal_S19e PF01090.19 ORF32716 - 1.1e-23 83.5 0.3 1.2e-23 83.4 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RNase_PH_C PF03725.15 ORF32443 - 8.6e-14 51.3 0.3 9.9e-14 51.1 0.3 1.1 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 DUF5593 PF18007.1 ORF31962 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5593) UPF0731 PF14982.6 ORF31916 - 0.019 15.1 0.2 0.029 14.5 0.2 1.3 1 1 0 1 1 1 0 UPF0731 family Ost5 PF05251.12 ORF31741 - 0.028 14.7 1.5 0.045 14.0 1.5 1.3 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit 5 Bul1_C PF04426.12 ORF31664 - 0.026 13.9 0.2 0.027 13.9 0.2 1.1 1 0 0 1 1 1 0 Bul1 C terminus DUF1263 PF06882.12 ORF31457 - 0.02 14.9 3.1 0.051 13.6 3.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1263) BioY PF02632.14 ORF31370 - 0.014 15.5 1.5 0.018 15.1 1.5 1.1 1 0 0 1 1 1 0 BioY family Arteri_Gl PF00951.18 ORF30685 - 0.06 13.2 1.1 0.067 13.0 1.1 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein EURL PF06937.11 ORF30672 - 0.0071 15.8 0.1 0.0078 15.7 0.1 1.0 1 0 0 1 1 1 1 EURL protein zf-AN1 PF01428.16 ORF29945 - 2e-10 40.7 11.5 2.7e-10 40.3 11.5 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger RPAP2_Rtr1 PF04181.13 ORF29945 - 0.014 15.7 0.4 0.014 15.7 0.4 1.6 2 0 0 2 2 2 0 Rtr1/RPAP2 family Endotoxin_N PF03945.14 ORF28987 - 0.028 14.1 0.1 0.028 14.1 0.1 1.1 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain Fer4_24 PF18109.1 ORF28987 - 0.076 13.3 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain RGS12_us2 PF16611.5 ORF28288 - 0.03 14.7 0.0 0.037 14.4 0.0 1.3 1 0 0 1 1 1 0 Unstructured region between RBD and GoLoco TPR_1 PF00515.28 ORF27597 - 4.5e-09 35.7 1.8 2e-05 24.2 0.3 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF27597 - 2.3e-07 30.4 1.9 4.7e-05 23.2 0.9 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF27597 - 0.0001 22.9 0.3 0.00013 22.6 0.3 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF27597 - 0.00057 19.5 0.4 0.014 15.0 0.1 2.2 1 1 1 2 2 2 1 TPR repeat TPR_6 PF13174.6 ORF27597 - 0.0019 18.7 0.4 0.17 12.6 0.3 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF27597 - 0.0024 18.1 0.2 0.0061 16.9 0.1 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF27597 - 0.0077 16.4 0.0 0.01 16.0 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF27597 - 0.023 14.9 0.6 0.35 11.2 0.2 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF27597 - 0.032 15.0 0.1 2.4 9.2 0.0 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF27597 - 0.063 13.8 0.3 0.082 13.4 0.3 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DHHC PF01529.20 ORF23307 - 0.14 12.3 0.7 0.19 11.8 0.7 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Stevor PF17410.2 ORF23307 - 0.18 11.3 0.2 0.2 11.1 0.2 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame VPDSG-CTERM PF18205.1 ORF23307 - 3 7.8 5.5 1.8 8.4 3.8 1.5 1 1 1 2 2 2 0 VPDSG-CTERM motif DUF2684 PF10885.8 ORF22971 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) GSG-1 PF07803.11 ORF22452 - 0.035 14.0 0.1 0.044 13.7 0.1 1.1 1 0 0 1 1 1 0 GSG1-like protein TPPK_C PF12555.8 ORF22155 - 0.0064 16.5 0.1 0.013 15.5 0.0 1.5 2 0 0 2 2 2 1 Thiamine pyrophosphokinase C terminal K_trans PF02705.16 ORF22155 - 0.0072 14.9 0.3 0.008 14.7 0.3 1.0 1 0 0 1 1 1 1 K+ potassium transporter RskA PF10099.9 ORF22155 - 0.028 14.7 0.7 0.031 14.6 0.7 1.0 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF3439 PF11921.8 ORF22155 - 0.44 10.5 6.8 0.54 10.2 6.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) SSP160 PF06933.11 ORF22155 - 4.3 5.4 9.1 4.9 5.2 9.1 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF5438 PF17506.2 ORF22095 - 0.059 13.7 3.7 0.13 12.6 1.6 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5438) DHHC PF01529.20 ORF21519 - 0.13 12.4 0.6 0.18 11.9 0.6 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Stevor PF17410.2 ORF21519 - 0.18 11.3 0.2 0.2 11.1 0.2 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame VPDSG-CTERM PF18205.1 ORF21519 - 3 7.8 5.5 1.8 8.4 3.8 1.5 1 1 1 2 2 2 0 VPDSG-CTERM motif PsaF PF17550.2 ORF21045 - 0.013 15.0 0.1 0.013 15.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function Ribosomal_S13_N PF08069.12 ORF20966 - 0.07 13.2 0.0 0.095 12.7 0.0 1.3 1 0 0 1 1 1 0 Ribosomal S13/S15 N-terminal domain DUF551 PF04448.12 ORF20856 - 0.022 15.7 2.3 0.22 12.5 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF551) AHSA1 PF08327.11 ORF20856 - 0.094 13.0 0.1 2.8 8.2 0.0 2.0 2 0 0 2 2 2 0 Activator of Hsp90 ATPase homolog 1-like protein Dam PF05869.11 ORF20856 - 0.11 12.0 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 DNA N-6-adenine-methyltransferase (Dam) SAM_3 PF18016.1 ORF20323 - 0.043 13.6 0.0 0.063 13.1 0.0 1.2 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Meckelin PF09773.9 ORF19835 - 0.013 13.6 2.2 0.014 13.6 2.2 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) Caps_synth PF05704.12 ORF19835 - 0.066 12.6 1.0 0.07 12.5 1.0 1.1 1 0 0 1 1 1 0 Capsular polysaccharide synthesis protein PUB_1 PF18486.1 ORF19793 - 0.043 13.7 0.1 0.057 13.3 0.1 1.3 1 0 0 1 1 1 0 PNGase/UBA- or UBX-containing domain DUF2684 PF10885.8 ORF19375 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) DUF3837 PF12939.7 ORF19037 - 0.035 14.5 0.0 0.048 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3837) DUF4020 PF13212.6 ORF19037 - 0.077 12.8 0.0 0.077 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4020) GDP_Man_Dehyd PF16363.5 ORF19026 - 0.018 14.5 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase FF PF01846.19 ORF19026 - 0.094 12.9 0.1 5 7.4 0.0 2.1 2 0 0 2 2 2 0 FF domain DUF2097 PF09870.9 ORF1901 - 0.035 14.3 0.5 0.049 13.9 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2097) Thioredoxin PF00085.20 ORF19000 - 0.13 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin TPR_4 PF07721.14 ORF1849 - 7.3 7.5 8.0 7.5 7.5 0.9 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF1758 PF05585.12 ORF18406 - 0.092 12.5 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Putative peptidase (DUF1758) CEP44 PF15007.6 ORF1794 - 0.034 14.3 0.2 0.044 14.0 0.2 1.3 1 1 0 1 1 1 0 Centrosomal spindle body, CEP44 UEV PF05743.13 ORF16885 - 0.027 14.3 0.1 0.084 12.7 0.0 1.7 1 1 1 2 2 2 0 UEV domain NADH_dh_m_C1 PF15088.6 ORF15691 - 0.0078 15.8 0.2 0.013 15.1 0.2 1.3 1 0 0 1 1 1 1 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial TRP PF06011.12 ORF15584 - 0.042 12.6 1.9 0.041 12.6 1.9 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel GWT1 PF06423.12 ORF15584 - 0.066 13.3 0.9 0.074 13.2 0.9 1.0 1 0 0 1 1 1 0 GWT1 Clostridium_P47 PF06597.11 ORF15584 - 0.11 11.2 0.4 0.13 11.0 0.4 1.0 1 0 0 1 1 1 0 Clostridium P-47 protein TMEM154 PF15102.6 ORF15584 - 0.15 11.9 0.0 0.15 11.9 0.0 1.4 2 0 0 2 2 2 0 TMEM154 protein family Spc24 PF08286.11 ORF15538 - 0.013 15.8 0.2 0.016 15.4 0.2 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Stonin2_N PF12016.8 ORF14703 - 0.38 10.1 6.5 0.41 10.0 6.5 1.0 1 0 0 1 1 1 0 Stonin 2 TRP PF06011.12 ORF14390 - 0.018 13.8 2.2 0.022 13.5 2.2 1.2 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF3099 PF11298.8 ORF14390 - 0.061 13.5 2.4 0.085 13.0 2.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) DUF4630 PF15443.6 ORF14061 - 0.024 14.8 0.2 0.025 14.7 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4630) zf-AN1 PF01428.16 ORF13662 - 2e-10 40.7 11.5 2.7e-10 40.3 11.5 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger RPAP2_Rtr1 PF04181.13 ORF13662 - 0.014 15.7 0.4 0.014 15.7 0.4 1.6 2 0 0 2 2 2 0 Rtr1/RPAP2 family Porphobil_deam PF01379.20 ORF13164 - 0.046 13.2 0.1 0.051 13.1 0.1 1.1 1 0 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain NUMOD1 PF07453.13 ORF12493 - 0.76 10.1 6.4 0.33 11.3 0.5 2.7 3 0 0 3 3 3 0 NUMOD1 domain Ferlin_C PF16165.5 ORF12359 - 0.24 11.4 2.4 0.28 11.1 2.4 1.2 1 0 0 1 1 1 0 Ferlin C-terminus Colipase-like PF15083.6 ORF11293 - 0.18 11.9 4.9 0.24 11.5 2.8 1.9 1 1 1 2 2 2 0 Colipase-like Tetraspanin PF00335.20 ORF112443 - 0.017 14.8 0.2 0.019 14.7 0.2 1.0 1 0 0 1 1 1 0 Tetraspanin family CRA PF06589.11 ORF112443 - 0.018 15.1 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) DND1_DSRM PF14709.7 ORF112443 - 0.064 13.5 0.1 0.081 13.2 0.1 1.1 1 0 0 1 1 1 0 double strand RNA binding domain from DEAD END PROTEIN 1 DUF4131 PF13567.6 ORF112443 - 0.082 12.6 0.0 0.084 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Ac76 PF05814.11 ORF112443 - 0.091 12.8 0.2 0.1 12.6 0.2 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) LRAT PF04970.13 ORF112379 - 8.3e-07 29.4 0.6 1.3e-06 28.7 0.3 1.4 1 1 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 ORF112379 - 0.053 13.4 0.8 0.1 12.4 0.8 1.5 1 1 1 2 2 2 0 PPPDE putative peptidase domain zf-AN1 PF01428.16 ORF111618 - 2e-10 40.7 11.5 2.7e-10 40.3 11.5 1.2 1 0 0 1 1 1 1 AN1-like Zinc finger RPAP2_Rtr1 PF04181.13 ORF111618 - 0.014 15.7 0.4 0.014 15.7 0.4 1.6 2 0 0 2 2 2 0 Rtr1/RPAP2 family PUNUT PF16913.5 ORF110280 - 0.13 11.4 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 Purine nucleobase transmembrane transport DUF4600 PF15372.6 ORF11005 - 0.012 16.1 0.5 0.013 16.0 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4600) TBCA PF02970.16 ORF109843 - 0.00044 20.5 2.0 0.00048 20.4 2.0 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A TPR_9 PF13371.6 ORF109843 - 0.0047 17.0 0.3 0.018 15.2 0.3 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat HetR_C PF18460.1 ORF109843 - 0.082 12.8 1.2 0.35 10.8 0.8 1.9 1 1 1 2 2 2 0 Heterocyst differentiation regulator C-terminal Hood domain betaPIX_CC PF16523.5 ORF109843 - 0.2 11.5 3.4 0.31 10.9 3.4 1.6 1 1 0 1 1 1 0 betaPIX coiled coil PDGF PF00341.17 ORF10972 - 0.032 14.6 0.6 0.038 14.3 0.6 1.3 1 0 0 1 1 1 0 PDGF/VEGF domain ATP_synt_H PF05493.13 ORF109373 - 6.4e-17 61.8 4.4 8.6e-17 61.4 4.4 1.1 1 0 0 1 1 1 1 ATP synthase subunit H Caroten_synth PF04240.12 ORF109373 - 0.0081 16.0 1.4 0.0089 15.9 1.4 1.1 1 0 0 1 1 1 1 Carotenoid biosynthesis protein Cytochrome_B PF00033.19 ORF108853 - 0.0071 16.2 1.6 0.0083 16.0 1.6 1.1 1 0 0 1 1 1 1 Cytochrome b/b6/petB DUF2684 PF10885.8 ORF108376 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Corona_5a PF06336.11 ORF108180 - 0.023 14.7 0.0 0.033 14.2 0.0 1.3 1 0 0 1 1 1 0 Coronavirus 5a protein Pkinase PF00069.25 ORF107892 - 5.2e-19 68.6 0.1 5.6e-19 68.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF107892 - 1.3e-11 44.3 0.0 1.3e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF107892 - 0.00026 19.9 0.0 0.00029 19.7 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF107892 - 0.05 12.5 0.0 0.05 12.5 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 ORF107892 - 0.062 12.6 0.1 0.066 12.6 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF3611 PF12263.8 ORF107542 - 0.041 13.8 0.1 0.058 13.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) Dzip-like_N PF13815.6 ORF107157 - 0.0061 16.5 0.2 0.0072 16.3 0.2 1.2 1 0 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal TraA PF05513.11 ORF1070 - 0.13 12.6 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 TraA Ndc1_Nup PF09531.10 ORF106667 - 0.46 9.1 5.0 0.48 9.1 5.0 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Pox_P35 PF03213.14 ORF106667 - 0.77 8.9 4.7 0.81 8.8 4.7 1.1 1 0 0 1 1 1 0 Poxvirus P35 protein Baculo_11_kDa PF06143.11 ORF106667 - 1.9 8.1 8.4 2.8 7.6 8.4 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family Herpes_LMP1 PF05297.11 ORF106667 - 5 6.2 7.7 6.2 5.9 7.7 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) EMP24_GP25L PF01105.24 ORF106667 - 6.7 6.6 5.9 8 6.4 5.9 1.1 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD SPATA25 PF15218.6 ORF105995 - 0.12 12.1 2.9 0.13 12.0 2.9 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 25 ArfGap PF01412.18 ORF10498 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf zf-Paramyx-P PF13008.7 ORF104890 - 0.034 13.6 0.4 0.043 13.3 0.4 1.2 1 0 0 1 1 1 0 Zinc-binding domain of Paramyxoviridae V protein DUF2407_C PF13373.6 ORF104738 - 0.16 12.1 0.2 0.18 12.0 0.2 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain Vpu PF00558.19 ORF104734 - 0.068 13.0 0.1 0.068 13.0 0.1 1.9 2 0 0 2 2 2 0 Vpu protein Creatininase PF02633.14 ORF104395 - 0.057 12.9 0.0 0.059 12.8 0.0 1.0 1 0 0 1 1 1 0 Creatinine amidohydrolase CX9C PF16860.5 ORF10419 - 0.036 14.1 0.8 0.1 12.6 0.9 1.7 1 1 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, MMTV_SAg PF01054.17 ORF104129 - 0.16 11.5 0.1 0.19 11.2 0.1 1.1 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen Baculo_E56 PF04639.12 ORF104076 - 0.11 11.7 1.2 0.12 11.6 1.2 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope DUF790 PF05626.11 ORF103937 - 0.01 14.6 0.0 0.011 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF790) Ferlin_C PF16165.5 ORF103870 - 0.18 11.8 2.1 0.23 11.4 2.1 1.3 1 0 0 1 1 1 0 Ferlin C-terminus VirB3 PF05101.13 ORF103870 - 3.9 7.8 6.5 5.1 7.4 6.3 1.3 1 1 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DFF-C PF09033.10 ORF103602 - 0.025 14.5 0.1 0.027 14.4 0.1 1.1 1 0 0 1 1 1 0 DNA Fragmentation factor 45kDa, C terminal domain PKD_channel PF08016.12 ORF103466 - 0.1 11.3 0.4 0.1 11.3 0.4 1.0 1 0 0 1 1 1 0 Polycystin cation channel P2 PF07194.11 ORF103466 - 0.11 12.6 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 P2 response regulator binding domain NEXCaM_BD PF16644.5 ORF103447 - 0.014 15.7 1.4 0.015 15.5 1.4 1.2 1 0 0 1 1 1 0 Regulatory region of Na+/H+ exchanger NHE binds to calmodulin DUF2684 PF10885.8 ORF103284 - 0.022 14.9 0.9 0.028 14.5 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Isochorismatase PF00857.20 ORF10233 - 0.069 13.3 0.0 0.081 13.1 0.0 1.2 1 0 0 1 1 1 0 Isochorismatase family YSIRK_signal PF04650.17 ORF101596 - 0.85 9.5 3.8 1.2 9.0 3.8 1.2 1 0 0 1 1 1 0 YSIRK type signal peptide PFOR_II PF17147.4 ORF1013 - 0.2 12.0 0.0 0.26 11.6 0.0 1.2 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II Troponin-I_N PF11636.8 ORF101208 - 0.11 12.5 0.5 0.16 11.9 0.5 1.3 1 0 0 1 1 1 0 Troponin I residues 1-32 COX7a PF02238.15 ORF100640 - 0.017 15.5 3.2 3.5 8.1 0.2 2.3 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII DUF3648 PF12364.8 ORF100461 - 0.0042 17.3 0.2 0.0052 17.0 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3648) SpoVS PF04232.12 NODE_65113_length_247_cov_0.834906_g57172_i0forward_frame_1 - 0.016 15.0 0.0 0.02 14.6 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein S (SpoVS) Phage_tail_S PF05069.13 NODE_65112_length_247_cov_0.882075_g57171_i0forward_frame_1 - 0.029 14.2 0.1 0.033 14.0 0.1 1.1 1 0 0 1 1 1 0 Phage virion morphogenesis family PUF PF00806.19 NODE_65106_length_247_cov_0.966981_g57165_i0reverse_frame_1 - 5.4e-13 47.9 0.1 9.6e-05 21.9 0.0 2.9 3 0 0 3 3 3 2 Pumilio-family RNA binding repeat DUF3915 PF13054.6 NODE_65103_length_247_cov_1.047170_g57162_i0forward_frame_1 - 0.19 11.7 1.4 0.24 11.4 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_65103_length_247_cov_1.047170_g57162_i0forward_frame_1 - 1.7 6.9 5.5 2.2 6.5 5.5 1.2 1 0 0 1 1 1 0 Atrophin-1 family Aa_trans PF01490.18 NODE_65100_length_247_cov_1.108491_g57159_i0reverse_frame_1 - 9.8e-06 24.5 1.9 1.3e-05 24.2 1.9 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 NODE_65100_length_247_cov_1.108491_g57159_i0reverse_frame_1 - 0.00076 18.6 1.6 0.00097 18.3 1.6 1.2 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family 14-3-3 PF00244.20 NODE_65094_length_247_cov_1.132075_g57153_i0forward_frame_1 - 1.7e-12 47.3 0.4 2.2e-12 47.0 0.4 1.1 1 0 0 1 1 1 1 14-3-3 protein L27_N PF09060.10 NODE_65094_length_247_cov_1.132075_g57153_i0forward_frame_1 - 0.024 14.7 0.1 0.046 13.8 0.1 1.4 1 0 0 1 1 1 0 L27_N hSac2 PF12456.8 NODE_65093_length_247_cov_1.132075_g57152_i0forward_frame_1 - 0.042 13.6 0.1 0.055 13.2 0.1 1.2 1 0 0 1 1 1 0 Inositol phosphatase DisA_N PF02457.16 NODE_65090_length_247_cov_1.132075_g57149_i0reverse_frame_1 - 0.081 12.5 0.1 0.11 12.0 0.1 1.4 1 1 0 1 1 1 0 DisA bacterial checkpoint controller nucleotide-binding Arylsulfotrans PF05935.11 NODE_65090_length_247_cov_1.132075_g57149_i0reverse_frame_1 - 0.14 11.0 0.0 0.16 10.8 0.0 1.0 1 0 0 1 1 1 0 Arylsulfotransferase (ASST) NADH_4Fe-4S PF10589.9 NODE_65083_length_247_cov_1.216981_g57142_i0reverse_frame_1 - 0.016 15.3 0.3 0.022 14.8 0.3 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CTXphi_pIII-N1 PF16710.5 NODE_65079_length_247_cov_1.316038_g57138_i0forward_frame_1 - 0.0084 16.2 0.8 0.0091 16.1 0.8 1.1 1 0 0 1 1 1 1 N-terminal N1 domain of Vibrio phage CTXphi pIII DUF3989 PF13150.6 NODE_65067_length_247_cov_1.419811_g57126_i0reverse_frame_1 - 0.0094 15.7 0.1 0.011 15.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3989) DUF4345 PF14248.6 NODE_65058_length_247_cov_1.528302_g57117_i0forward_frame_1 - 0.022 14.7 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4345) DUF3951 PF13131.6 NODE_65057_length_247_cov_1.533019_g57116_i0reverse_frame_1 - 0.009 16.2 0.3 0.015 15.5 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3951) Dscam_C PF12355.8 NODE_65050_length_247_cov_1.617925_g57109_i0reverse_frame_1 - 0.019 15.9 0.1 0.021 15.8 0.1 1.1 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal TssD PF17642.1 NODE_65050_length_247_cov_1.617925_g57109_i0reverse_frame_1 - 0.08 12.8 0.0 0.09 12.6 0.0 1.1 1 0 0 1 1 1 0 Hemolysin coregulated protein Hcp (TssD) DUF4124 PF13511.6 NODE_65050_length_247_cov_1.617925_g57109_i0forward_frame_1 - 0.033 14.5 0.0 0.033 14.5 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4124) IFRD PF05004.13 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_1 - 0.036 13.2 0.1 0.04 13.0 0.1 1.1 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) DUF953 PF06110.11 NODE_65038_length_247_cov_1.792453_g57097_i0reverse_frame_1 - 0.17 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) DnaJ_C PF01556.18 NODE_65037_length_247_cov_1.797170_g57096_i0forward_frame_1 - 0.00017 21.7 0.0 0.00018 21.6 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.19 NODE_65037_length_247_cov_1.797170_g57096_i0forward_frame_1 - 0.0057 17.0 0.4 0.0073 16.7 0.4 1.2 1 0 0 1 1 1 1 DnaJ central domain GTP_EFTU PF00009.27 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_1 - 1.4e-27 96.5 0.6 1.5e-27 96.4 0.6 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Septin PF00735.18 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_1 - 7.3e-05 22.2 0.1 8.4e-05 22.0 0.1 1.0 1 0 0 1 1 1 1 Septin MMR_HSR1 PF01926.23 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_1 - 0.00041 20.4 0.0 0.00044 20.3 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase AIG1 PF04548.16 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_1 - 0.0019 17.6 0.0 0.0019 17.6 0.0 1.1 1 0 0 1 1 1 1 AIG1 family SRPRB PF09439.10 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_1 - 0.098 12.1 0.1 0.15 11.5 0.1 1.3 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Ribosomal_L37ae PF01780.19 NODE_65030_length_247_cov_1.877358_g57089_i0reverse_frame_1 - 0.057 13.5 0.4 0.067 13.3 0.4 1.1 1 0 0 1 1 1 0 Ribosomal L37ae protein family DUF3916 PF13079.6 NODE_65027_length_247_cov_1.900943_g57086_i0forward_frame_1 - 0.034 14.0 0.4 0.041 13.8 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) EMC3_TMCO1 PF01956.16 NODE_65027_length_247_cov_1.900943_g57086_i0forward_frame_1 - 0.047 13.4 0.1 0.053 13.3 0.1 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like UPF0139 PF03669.13 NODE_65025_length_247_cov_1.924528_g57084_i0forward_frame_1 - 0.71 9.8 5.0 0.73 9.7 4.2 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0139) zf-CCHC PF00098.23 NODE_65020_length_247_cov_1.943396_g57079_i0forward_frame_1 - 1.9e-07 30.9 2.6 3.6e-07 30.0 2.6 1.4 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_4 PF14392.6 NODE_65020_length_247_cov_1.943396_g57079_i0forward_frame_1 - 0.002 17.8 0.5 0.0036 17.0 0.5 1.4 1 0 0 1 1 1 1 Zinc knuckle EF-hand_6 PF13405.6 NODE_65013_length_247_cov_2.056604_g57072_i0forward_frame_1 - 0.00053 19.7 0.1 0.0012 18.7 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_65013_length_247_cov_2.056604_g57072_i0forward_frame_1 - 0.033 13.7 0.5 0.1 12.2 0.0 2.1 2 0 0 2 2 2 0 EF hand EF-hand_11 PF08976.11 NODE_65013_length_247_cov_2.056604_g57072_i0forward_frame_1 - 0.036 14.9 0.2 0.043 14.7 0.2 1.1 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_65013_length_247_cov_2.056604_g57072_i0forward_frame_1 - 0.059 13.8 1.4 0.076 13.5 1.4 1.3 1 0 0 1 1 1 0 EF-hand domain pair DUF5436 PF17504.2 NODE_65010_length_247_cov_2.103774_g57069_i0reverse_frame_1 - 0.27 11.6 4.8 0.1 12.9 2.1 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5436) RCC1 PF00415.18 NODE_65010_length_247_cov_2.103774_g57069_i0forward_frame_1 - 9.2e-06 26.2 0.0 0.0011 19.5 0.0 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_65010_length_247_cov_2.103774_g57069_i0forward_frame_1 - 0.083 12.7 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat DUF1525 PF07511.11 NODE_65007_length_247_cov_2.193396_g57066_i0reverse_frame_1 - 0.024 14.8 0.1 0.027 14.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1525) S_4TM PF18159.1 NODE_65007_length_247_cov_2.193396_g57066_i0reverse_frame_1 - 0.52 9.6 2.6 0.6 9.4 2.6 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Peptidase_S7 PF00949.21 NODE_65004_length_247_cov_2.273585_g57063_i0forward_frame_1 - 0.059 13.2 0.0 0.066 13.0 0.0 1.1 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks288.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks288.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks288.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks288.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:02:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase PF00069.25 NODE_65000_length_247_cov_2.320755_g57059_i0forward_frame_1 - 2.2e-06 27.2 0.0 2.4e-06 27.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_65000_length_247_cov_2.320755_g57059_i0forward_frame_1 - 0.032 13.5 0.0 0.038 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase Corona_NS1 PF06145.11 NODE_64998_length_247_cov_2.377358_g57057_i0forward_frame_1 - 0.43 10.2 3.7 0.14 11.7 1.0 1.6 2 0 0 2 2 2 0 Coronavirus nonstructural protein NS1 DER1 PF04511.15 NODE_64995_length_247_cov_2.410377_g57054_i0forward_frame_1 - 0.01 15.8 2.0 0.011 15.7 2.0 1.1 1 0 0 1 1 1 0 Der1-like family DUF4850 PF16142.5 NODE_64995_length_247_cov_2.410377_g57054_i0forward_frame_1 - 0.1 12.0 0.3 0.11 12.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4850) COPI_C PF06957.11 NODE_64979_length_247_cov_2.834906_g57038_i0reverse_frame_1 - 0.11 11.2 0.3 0.12 11.2 0.3 1.0 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus Ins145_P3_rec PF08709.11 NODE_64976_length_247_cov_2.976415_g57035_i0forward_frame_1 - 0.022 13.9 0.1 0.022 13.9 0.1 1.2 1 0 0 1 1 1 0 Inositol 1,4,5-trisphosphate/ryanodine receptor FANC_SAP PF18081.1 NODE_64975_length_247_cov_3.033019_g57034_i0forward_frame_1 - 0.0079 16.3 0.6 0.014 15.5 0.6 1.5 1 0 0 1 1 1 1 Fanconi anemia-associated nuclease SAP domain PAP_PilO PF06864.12 NODE_64974_length_247_cov_3.042453_g57033_i0forward_frame_1 - 0.43 9.3 5.4 0.42 9.4 5.4 1.1 1 0 0 1 1 1 0 Pilin accessory protein (PilO) CAP_N PF01213.19 NODE_64974_length_247_cov_3.042453_g57033_i0forward_frame_1 - 9.8 5.6 15.2 10 5.5 15.2 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF697 PF05128.12 NODE_64973_length_247_cov_3.047170_g57032_i0forward_frame_1 - 6.3e-24 84.5 0.0 6.8e-24 84.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF697) PA PF02225.22 NODE_64968_length_247_cov_3.490566_g57027_i0forward_frame_1 - 1.8e-08 34.2 0.0 2.1e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 PA domain CNOT11 PF10155.9 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_1 - 0.023 14.9 7.3 0.36 11.0 1.8 2.8 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 11 DUF1272 PF06906.11 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_1 - 0.42 10.7 2.7 0.97 9.6 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) DUF325 PF03804.13 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_1 - 0.46 10.5 10.3 1.9 8.6 2.7 2.8 1 1 2 3 3 3 0 Viral proteins of unknown function EMI PF07546.13 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_1 - 4.6 8.1 11.0 7.1 7.5 3.5 2.1 1 1 1 2 2 2 0 EMI domain CHCH PF06747.13 NODE_64947_length_247_cov_40.584906_g57006_i0forward_frame_1 - 0.0011 19.1 5.5 0.0011 19.1 5.5 1.5 2 0 0 2 2 2 1 CHCH domain NAR2 PF16974.5 NODE_64947_length_247_cov_40.584906_g57006_i0forward_frame_1 - 0.05 13.0 0.6 0.053 12.9 0.6 1.1 1 0 0 1 1 1 0 High-affinity nitrate transporter accessory CX9C PF16860.5 NODE_64947_length_247_cov_40.584906_g57006_i0forward_frame_1 - 0.13 12.3 5.1 0.48 10.5 0.9 2.2 1 1 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, YlaH PF14036.6 NODE_64944_length_247_cov_43.367925_g57003_i0forward_frame_1 - 0.096 13.0 5.1 0.13 12.6 5.1 1.3 1 0 0 1 1 1 0 YlaH-like protein DAN PF03045.15 NODE_64937_length_247_cov_53.698113_g56996_i0reverse_frame_1 - 0.4 10.7 3.7 0.53 10.3 3.7 1.4 1 1 0 1 1 1 0 DAN domain XPG_I PF00867.18 NODE_64936_length_247_cov_55.245283_g56995_i0reverse_frame_1 - 0.18 12.2 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 XPG I-region Defensin_2 PF01097.18 NODE_64936_length_247_cov_55.245283_g56995_i0forward_frame_1 - 0.009 15.9 1.6 0.017 15.0 1.6 1.5 1 0 0 1 1 1 1 Arthropod defensin CDP-OH_P_tran_2 PF08009.11 NODE_64935_length_247_cov_56.221698_g56994_i0reverse_frame_1 - 0.6 10.0 6.5 1.4 8.9 6.5 1.6 1 1 0 1 1 1 0 CDP-alcohol phosphatidyltransferase 2 AmiS_UreI PF02293.15 NODE_64924_length_247_cov_66.094340_g56983_i0reverse_frame_1 - 0.17 11.9 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 AmiS/UreI family transporter DUF4637 PF15470.6 NODE_64923_length_247_cov_71.056604_g56982_i0reverse_frame_1 - 0.15 11.8 2.3 0.17 11.6 2.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) GT-D PF08759.11 NODE_64919_length_247_cov_75.433962_g56978_i0reverse_frame_1 - 0.00024 20.8 0.0 0.00028 20.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase GT-D fold PRIMA1 PF16101.5 NODE_64918_length_247_cov_81.783019_g56977_i0forward_frame_1 - 5.9 6.9 10.9 7.2 6.7 10.9 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Mito_fiss_reg PF05308.11 NODE_64918_length_247_cov_81.783019_g56977_i0forward_frame_1 - 6.9 6.7 5.2 7.4 6.6 5.2 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator HTH_36 PF13730.6 NODE_64911_length_247_cov_125.386792_g56970_i0reverse_frame_1 - 0.091 12.7 0.5 0.12 12.4 0.5 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2633 PF11119.8 NODE_64903_length_247_cov_653.905660_g56962_i0reverse_frame_1 - 0.18 11.7 3.2 0.29 11.1 3.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Mem_trans PF03547.18 NODE_64901_length_247_cov_5245.358491_g56960_i0forward_frame_1 - 0.00014 20.4 1.0 0.00016 20.2 1.0 1.1 1 0 0 1 1 1 1 Membrane transport protein Hfq PF17209.3 NODE_64899_length_248_cov_0.751174_g56958_i0forward_frame_1 - 0.18 11.5 0.0 0.3 10.7 0.0 1.3 1 0 0 1 1 1 0 Hfq protein LCIB_C_CA PF18599.1 NODE_64894_length_248_cov_0.938967_g56953_i0reverse_frame_1 - 0.017 14.5 0.0 0.02 14.2 0.0 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases DUF4667 PF15700.5 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_1 - 0.035 14.2 9.1 0.037 14.1 9.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4667) CCDC24 PF15669.5 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_1 - 6.2 6.6 8.3 6.7 6.5 8.3 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family DUF1072 PF06380.11 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.048 13.6 0.8 0.065 13.1 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) CENP-B_dimeris PF09026.10 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.089 13.2 19.7 0.1 13.0 19.7 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain SDA1 PF05285.12 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.1 12.0 6.6 0.083 12.3 6.6 1.0 1 0 0 1 1 1 0 SDA1 BUD22 PF09073.10 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.15 11.4 4.4 0.12 11.7 4.4 1.0 1 0 0 1 1 1 0 BUD22 Sporozoite_P67 PF05642.11 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.42 8.6 4.9 0.43 8.6 4.9 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Nop14 PF04147.12 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.55 8.4 9.4 0.53 8.4 9.4 1.0 1 0 0 1 1 1 0 Nop14-like family eIF-3c_N PF05470.12 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 1.8 6.8 4.5 1.6 6.9 4.5 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus TRAP_alpha PF03896.16 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 2.8 7.1 4.8 3 7.0 4.8 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit GCIP PF13324.6 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 2.9 7.4 9.3 3.3 7.2 9.3 1.2 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting RXT2_N PF08595.11 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 2.9 7.9 10.1 3.2 7.8 10.1 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal Sigma70_ner PF04546.13 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 7.5 6.4 13.9 8.5 6.2 13.9 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region PAD_N PF08526.10 NODE_64872_length_248_cov_1.295775_g56931_i0reverse_frame_1 - 0.05 14.0 0.4 0.055 13.8 0.4 1.2 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) N-terminal domain 7TM_GPCR_Sru PF10322.9 NODE_64870_length_248_cov_1.309859_g56929_i0reverse_frame_1 - 0.031 13.6 0.3 0.038 13.3 0.3 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru RINT1_TIP1 PF04437.13 NODE_64867_length_248_cov_1.314554_g56926_i0forward_frame_1 - 0.038 12.9 0.1 0.038 12.9 0.1 1.0 1 0 0 1 1 1 0 RINT-1 / TIP-1 family FYDLN_acid PF09538.10 NODE_64863_length_248_cov_1.394366_g56922_i0reverse_frame_1 - 0.033 14.9 1.7 0.043 14.5 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) Pap_E4 PF02711.14 NODE_64863_length_248_cov_1.394366_g56922_i0reverse_frame_1 - 2.1 9.4 12.2 0.92 10.5 9.7 1.6 1 1 1 2 2 2 0 E4 protein LAT PF15234.6 NODE_64863_length_248_cov_1.394366_g56922_i0forward_frame_1 - 3.7 7.2 4.0 3.9 7.1 4.0 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells TEBP_beta PF07404.11 NODE_64862_length_248_cov_1.399061_g56921_i0reverse_frame_1 - 0.021 14.2 1.2 0.021 14.2 1.2 1.1 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) LAGLIDADG_1 PF00961.19 NODE_64856_length_248_cov_1.478873_g56915_i0forward_frame_1 - 0.062 14.3 0.4 0.075 14.0 0.4 1.1 1 0 0 1 1 1 0 LAGLIDADG endonuclease PEHE PF15275.6 NODE_64855_length_248_cov_1.478873_g56914_i0reverse_frame_1 - 0.046 14.4 0.2 0.054 14.1 0.2 1.1 1 0 0 1 1 1 0 PEHE domain Nitroreductase PF00881.24 NODE_64844_length_248_cov_1.535211_g56903_i0forward_frame_1 - 0.12 12.4 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Nitroreductase family YmgB PF10798.8 NODE_64843_length_248_cov_1.563380_g56902_i0reverse_frame_1 - 0.038 13.8 0.4 0.072 12.9 0.4 1.5 1 0 0 1 1 1 0 Biofilm development protein YmgB/AriR WGG PF10273.9 NODE_64843_length_248_cov_1.563380_g56902_i0reverse_frame_1 - 0.14 12.8 0.4 2.1 9.1 0.4 2.0 1 1 0 1 1 1 0 Pre-rRNA-processing protein TSR2 Maf_N PF08383.11 NODE_64837_length_248_cov_1.624413_g56896_i0forward_frame_1 - 0.18 11.6 0.0 0.24 11.2 0.0 1.2 1 0 0 1 1 1 0 Maf N-terminal region DUF2357 PF09823.9 NODE_64825_length_248_cov_1.779343_g56884_i0reverse_frame_1 - 0.022 14.0 0.0 0.023 14.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2357) Guanylate_cyc_2 PF09778.9 NODE_64822_length_248_cov_1.807512_g56881_i0reverse_frame_1 - 0.044 13.2 0.1 0.046 13.1 0.1 1.0 1 0 0 1 1 1 0 Guanylylate cyclase RIFIN PF02009.16 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_1 - 1.5 8.6 8.9 1.6 8.5 8.9 1.0 1 0 0 1 1 1 0 Rifin Promethin PF16015.5 NODE_64820_length_248_cov_1.812207_g56879_i0forward_frame_1 - 1.6 8.7 24.1 2.2 8.2 24.1 1.2 1 0 0 1 1 1 0 Promethin TBK1_CCD1 PF18394.1 NODE_64819_length_248_cov_1.816901_g56878_i0reverse_frame_1 - 0.18 11.3 0.0 0.2 11.2 0.0 1.0 1 0 0 1 1 1 0 TANK-binding kinase 1 coiled-coil domain 1 DUF2563 PF10817.8 NODE_64817_length_248_cov_1.826291_g56876_i0reverse_frame_1 - 0.0032 18.1 0.3 0.0038 17.8 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2563) DUF4255 PF14065.6 NODE_64808_length_248_cov_2.051643_g56867_i0reverse_frame_1 - 0.11 12.2 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4255) PUB PF09409.10 NODE_64806_length_248_cov_2.061033_g56865_i0reverse_frame_1 - 0.021 14.8 0.1 0.032 14.1 0.1 1.3 1 0 0 1 1 1 0 PUB domain Sec1 PF00995.23 NODE_64804_length_248_cov_2.098592_g56863_i0forward_frame_1 - 0.0014 18.0 0.1 0.0015 17.8 0.1 1.1 1 0 0 1 1 1 1 Sec1 family DUF1343 PF07075.11 NODE_64802_length_248_cov_2.122066_g56861_i0reverse_frame_1 - 0.14 11.4 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1343) Leader_Trp PF08255.11 NODE_64799_length_248_cov_2.154930_g56858_i0reverse_frame_1 - 0.084 12.9 1.8 0.084 12.9 1.8 2.7 4 0 0 4 4 4 0 Trp-operon Leader Peptide GerPB PF10803.8 NODE_64797_length_248_cov_2.187793_g56856_i0reverse_frame_1 - 0.0039 17.2 0.0 0.0072 16.4 0.0 1.4 1 0 0 1 1 1 1 Spore germination GerPB UbiA PF01040.18 NODE_64787_length_248_cov_2.305164_g56846_i0reverse_frame_1 - 0.05 12.9 4.2 0.06 12.6 4.2 1.2 1 0 0 1 1 1 0 UbiA prenyltransferase family XhlA PF10779.9 NODE_64783_length_248_cov_2.413146_g56842_i0forward_frame_1 - 0.19 12.0 0.4 0.26 11.5 0.4 1.2 1 0 0 1 1 1 0 Haemolysin XhlA Prok-E2_D PF14460.6 NODE_64776_length_248_cov_2.516432_g56835_i0reverse_frame_1 - 0.055 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family D Cas_CT1975 PF09344.10 NODE_64769_length_248_cov_2.638498_g56828_i0forward_frame_1 - 0.11 12.0 0.2 0.13 11.7 0.2 1.0 1 0 0 1 1 1 0 CT1975-like protein RCC1_2 PF13540.6 NODE_64762_length_248_cov_2.934272_g56821_i0reverse_frame_1 - 6.8e-06 25.7 0.9 0.063 13.1 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat CAP_assoc_N PF14504.6 NODE_64757_length_248_cov_3.192488_g56816_i0reverse_frame_1 - 0.015 15.0 0.5 0.019 14.7 0.5 1.1 1 0 0 1 1 1 0 CAP-associated N-terminal DUF5086 PF16985.5 NODE_64750_length_248_cov_3.502347_g56809_i0reverse_frame_1 - 0.097 12.6 0.3 0.1 12.5 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5086) YyzF PF14116.6 NODE_64742_length_248_cov_26.089202_g56801_i0reverse_frame_1 - 0.12 12.4 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 YyzF-like protein DUF1980 PF09323.10 NODE_64742_length_248_cov_26.089202_g56801_i0forward_frame_1 - 0.84 9.5 3.4 1.1 9.2 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF489 PF04356.12 NODE_64738_length_248_cov_35.629108_g56797_i0reverse_frame_1 - 0.029 14.4 0.4 0.032 14.2 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF489) Tape_meas_lam_C PF09718.10 NODE_64733_length_248_cov_41.873239_g56792_i0reverse_frame_1 - 0.026 14.6 2.6 0.19 11.9 1.8 2.1 1 1 1 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) TFIIE_beta PF02186.15 NODE_64729_length_248_cov_46.746479_g56788_i0forward_frame_1 - 0.088 13.1 0.1 0.13 12.6 0.1 1.2 1 0 0 1 1 1 0 TFIIE beta subunit core domain zf-Sec23_Sec24 PF04810.15 NODE_64728_length_248_cov_47.342723_g56787_i0forward_frame_1 - 0.039 14.0 0.5 0.065 13.3 0.5 1.4 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger TPR_4 PF07721.14 NODE_64725_length_248_cov_49.610329_g56784_i0reverse_frame_1 - 0.017 15.7 1.9 0.051 14.2 1.9 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat Chordopox_RPO7 PF05864.12 NODE_64724_length_248_cov_49.863850_g56783_i0forward_frame_1 - 0.026 14.8 0.1 0.039 14.2 0.1 1.3 1 0 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Bystin PF05291.11 NODE_64718_length_248_cov_60.154930_g56777_i0forward_frame_1 - 0.11 11.8 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Bystin LRRNT PF01462.18 NODE_64716_length_248_cov_62.032864_g56775_i0reverse_frame_1 - 0.098 12.3 2.0 0.19 11.4 2.0 1.5 1 1 0 1 1 1 0 Leucine rich repeat N-terminal domain Haemocyan_bet_s PF14830.6 NODE_64715_length_248_cov_63.760563_g56774_i0forward_frame_1 - 0.018 15.0 0.0 0.023 14.7 0.0 1.1 1 0 0 1 1 1 0 Haemocyanin beta-sandwich SGP PF17228.2 NODE_64711_length_248_cov_66.915493_g56770_i0forward_frame_1 - 0.0046 17.8 0.4 0.0053 17.6 0.4 1.2 1 0 0 1 1 1 1 Sulphur globule protein CSD PF00313.22 NODE_64699_length_248_cov_90.413146_g56758_i0reverse_frame_1 - 3.2e-05 23.7 0.0 3.6e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain Keratin_2_head PF16208.5 NODE_64697_length_248_cov_96.159624_g56756_i0forward_frame_1 - 0.58 10.3 14.9 0.63 10.2 14.9 1.1 1 0 0 1 1 1 0 Keratin type II head DUF4215 PF13948.6 NODE_64695_length_248_cov_98.239437_g56754_i0forward_frame_1 - 0.0014 19.0 2.5 0.0014 19.0 2.5 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4215) PMT_4TMC PF16192.5 NODE_64694_length_248_cov_107.737089_g56753_i0forward_frame_1 - 0.13 11.8 7.5 0.17 11.5 7.5 1.1 1 0 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase DUF5331 PF17265.2 NODE_64692_length_248_cov_110.591549_g56751_i0reverse_frame_1 - 0.12 12.1 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5331) ATG27 PF09451.10 NODE_64691_length_248_cov_115.901408_g56750_i0forward_frame_1 - 0.007 16.3 0.0 0.0079 16.1 0.0 1.1 1 0 0 1 1 1 1 Autophagy-related protein 27 Man-6-P_recep PF02157.15 NODE_64691_length_248_cov_115.901408_g56750_i0forward_frame_1 - 0.14 11.2 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate receptor DUF2207 PF09972.9 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_1 - 0.15 10.8 7.4 0.16 10.7 7.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Shisa PF13908.6 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_1 - 0.23 11.7 2.3 0.24 11.6 2.3 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator UNC119_bdg PF15435.6 NODE_64675_length_248_cov_6349.215962_g56734_i0reverse_frame_1 - 0.0021 17.6 0.1 0.0023 17.5 0.1 1.1 1 0 0 1 1 1 1 UNC119-binding protein C5orf30 homologue RNHCP PF12647.7 NODE_64671_length_248_cov_72524.000000_g56730_i0reverse_frame_1 - 0.03 14.3 0.6 0.04 13.9 0.4 1.3 1 1 0 1 1 1 0 RNHCP domain Paxillin PF03535.13 NODE_64671_length_248_cov_72524.000000_g56730_i0reverse_frame_1 - 0.078 12.9 0.2 0.083 12.8 0.2 1.0 1 0 0 1 1 1 0 Paxillin family NdhL PF10716.9 NODE_64665_length_249_cov_1.112150_g56724_i0reverse_frame_1 - 0.053 13.5 5.8 0.085 12.8 5.8 1.4 1 1 0 1 1 1 0 NADH dehydrogenase transmembrane subunit Kinesin PF00225.23 NODE_64659_length_249_cov_1.130841_g56718_i0reverse_frame_1 - 8.9e-25 87.3 1.2 9.6e-25 87.2 1.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Pkinase PF00069.25 NODE_64656_length_249_cov_1.233645_g56715_i0reverse_frame_1 - 3.1e-10 39.9 0.0 3.3e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_64656_length_249_cov_1.233645_g56715_i0reverse_frame_1 - 0.00087 18.7 0.0 0.00092 18.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1295 PF06966.12 NODE_64655_length_249_cov_1.308411_g56714_i0forward_frame_1 - 0.096 12.2 0.1 0.12 11.9 0.1 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1295) Scm3 PF10384.9 NODE_64653_length_249_cov_1.397196_g56712_i0forward_frame_1 - 0.37 10.6 2.4 1.3 8.8 0.7 2.2 2 0 0 2 2 2 0 Centromere protein Scm3 Ribosomal_S19e PF01090.19 NODE_64650_length_249_cov_1.434579_g56709_i0reverse_frame_1 - 0.012 15.3 0.2 0.013 15.2 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein S19e Peptidase_M49 PF03571.15 NODE_64650_length_249_cov_1.434579_g56709_i0forward_frame_1 - 0.14 10.5 0.0 0.16 10.3 0.0 1.0 1 0 0 1 1 1 0 Peptidase family M49 CLN3 PF02487.17 NODE_64649_length_249_cov_1.457944_g56708_i0forward_frame_1 - 6.7e-05 22.1 2.4 6.8e-05 22.1 2.4 1.0 1 0 0 1 1 1 1 CLN3 protein Halogen_Hydrol PF10112.9 NODE_64649_length_249_cov_1.457944_g56708_i0forward_frame_1 - 0.55 10.2 2.3 0.62 10.0 2.3 1.1 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein LapA_dom PF06305.11 NODE_64649_length_249_cov_1.457944_g56708_i0forward_frame_1 - 4.6 7.1 6.0 10 6.0 5.9 1.7 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain GlgS PF08971.11 NODE_64644_length_249_cov_1.471963_g56703_i0forward_frame_1 - 0.13 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Glycogen synthesis protein DUF4719 PF15843.5 NODE_64643_length_249_cov_1.481308_g56702_i0forward_frame_1 - 0.0091 16.1 0.4 0.012 15.8 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4719) Antimicrobial10 PF08105.11 NODE_64639_length_249_cov_1.495327_g56698_i0forward_frame_1 - 0.19 11.8 0.1 0.34 11.0 0.1 1.4 1 0 0 1 1 1 0 Metchnikowin family Dicty_CTDC PF00526.18 NODE_64632_length_249_cov_1.602804_g56691_i0forward_frame_1 - 0.27 11.2 2.1 0.52 10.3 2.1 1.5 1 0 0 1 1 1 0 Dictyostelium (slime mold) repeat ASFV_J13L PF05568.11 NODE_64632_length_249_cov_1.602804_g56691_i0forward_frame_1 - 7.1 6.3 6.9 9.5 5.9 6.9 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Tub PF01167.18 NODE_64626_length_249_cov_1.668224_g56685_i0forward_frame_1 - 0.088 12.5 0.0 0.09 12.5 0.0 1.1 1 0 0 1 1 1 0 Tub family Dynein_light PF01221.18 NODE_64623_length_249_cov_1.672897_g56682_i0reverse_frame_1 - 0.67 10.3 2.4 1.1 9.6 2.4 1.3 1 0 0 1 1 1 0 Dynein light chain type 1 LtuB PF17455.2 NODE_64609_length_249_cov_1.841121_g56668_i0reverse_frame_1 - 0.13 12.9 0.5 0.21 12.2 0.5 1.5 1 1 0 1 1 1 0 Late transcription unit B FYVE PF01363.21 NODE_64598_length_249_cov_1.953271_g56657_i0forward_frame_1 - 5.8e-06 26.3 14.2 7.4e-06 26.0 14.2 1.1 1 0 0 1 1 1 1 FYVE zinc finger Mob_synth_C PF06463.13 NODE_64596_length_249_cov_1.971963_g56655_i0reverse_frame_1 - 0.0036 17.2 1.9 0.0047 16.9 1.9 1.2 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Mvb12 PF09452.10 NODE_64595_length_249_cov_1.981308_g56654_i0reverse_frame_1 - 0.019 15.4 0.5 0.028 14.8 0.4 1.3 1 1 0 1 1 1 0 ESCRT-I subunit Mvb12 I_LWEQ PF01608.17 NODE_64595_length_249_cov_1.981308_g56654_i0reverse_frame_1 - 0.18 12.0 3.7 0.22 11.7 3.7 1.1 1 0 0 1 1 1 0 I/LWEQ domain HET-S PF17108.5 NODE_64594_length_249_cov_1.990654_g56653_i0forward_frame_1 - 0.00057 19.6 0.2 0.0011 18.7 0.2 1.4 1 0 0 1 1 1 1 N-terminal small S protein of HET, non-prionic RCC1_2 PF13540.6 NODE_64578_length_249_cov_2.252336_g56637_i0reverse_frame_1 - 1.4e-07 31.1 0.5 0.018 14.8 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_64578_length_249_cov_2.252336_g56637_i0reverse_frame_1 - 6.3e-05 23.5 7.6 0.012 16.2 0.2 3.3 3 1 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat Glyco_hydro_25 PF01183.20 NODE_64573_length_249_cov_2.411215_g56632_i0reverse_frame_1 - 4.6e-20 72.6 0.0 4.8e-20 72.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 MM_CoA_mutase PF01642.22 NODE_64571_length_249_cov_2.560748_g56630_i0reverse_frame_1 - 0.26 9.8 0.1 0.31 9.5 0.1 1.0 1 0 0 1 1 1 0 Methylmalonyl-CoA mutase AraC_N PF06719.13 NODE_64570_length_249_cov_2.584112_g56629_i0forward_frame_1 - 3.7e-14 52.6 0.2 4e-14 52.5 0.2 1.0 1 0 0 1 1 1 1 AraC-type transcriptional regulator N-terminus Pescadillo_N PF06732.11 NODE_64567_length_249_cov_2.663551_g56626_i0forward_frame_1 - 0.031 13.8 0.1 0.037 13.6 0.1 1.0 1 0 0 1 1 1 0 Pescadillo N-terminus Cornifin PF02389.15 NODE_64564_length_249_cov_2.747664_g56623_i0forward_frame_1 - 0.36 11.0 9.0 0.42 10.8 9.0 1.3 1 1 0 1 1 1 0 Cornifin (SPRR) family DUF4637 PF15470.6 NODE_64557_length_249_cov_3.252336_g56616_i0reverse_frame_1 - 0.071 12.8 0.0 0.08 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF5357 PF17310.2 NODE_64555_length_249_cov_3.313084_g56614_i0forward_frame_1 - 0.063 11.8 0.0 0.068 11.7 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) PDE6_gamma PF04868.12 NODE_64545_length_249_cov_21.757009_g56604_i0forward_frame_1 - 0.039 14.2 0.2 0.039 14.2 0.2 1.5 2 0 0 2 2 2 0 Retinal cGMP phosphodiesterase, gamma subunit NinE PF05322.11 NODE_64544_length_249_cov_22.434579_g56603_i0forward_frame_1 - 0.042 13.7 0.3 0.042 13.7 0.3 1.6 2 0 0 2 2 2 0 NINE Protein CSN5_C PF18323.1 NODE_64542_length_249_cov_24.985981_g56601_i0reverse_frame_1 - 0.023 15.6 1.3 0.029 15.3 1.3 1.2 1 0 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain GAT PF03127.14 NODE_64540_length_249_cov_28.742991_g56599_i0forward_frame_1 - 0.029 14.7 2.5 3.8 7.9 0.5 2.1 1 1 1 2 2 2 0 GAT domain CCDC71L PF15374.6 NODE_64538_length_249_cov_36.897196_g56597_i0forward_frame_1 - 8 5.6 13.5 8.7 5.5 13.5 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 71L ParB PF08775.10 NODE_64536_length_249_cov_37.425234_g56595_i0forward_frame_1 - 0.0051 17.3 3.5 0.0055 17.2 3.5 1.1 1 0 0 1 1 1 1 ParB family Lipoprotein_20 PF13942.6 NODE_64532_length_249_cov_41.196262_g56591_i0reverse_frame_1 - 0.0097 15.8 0.1 0.011 15.6 0.1 1.1 1 0 0 1 1 1 1 YfhG lipoprotein LBP_C PF17386.2 NODE_64532_length_249_cov_41.196262_g56591_i0reverse_frame_1 - 0.057 13.3 0.0 0.078 12.9 0.0 1.3 1 0 0 1 1 1 0 Lacto-N-biose phosphorylase C-terminal domain DUF5435 PF17503.2 NODE_64530_length_249_cov_42.929907_g56589_i0forward_frame_1 - 0.73 9.5 3.3 0.88 9.3 3.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5435) DUF1676 PF07898.13 NODE_64528_length_249_cov_44.121495_g56587_i0reverse_frame_1 - 0.042 13.9 0.3 0.051 13.6 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF3410 PF11890.8 NODE_64523_length_249_cov_51.855140_g56582_i0forward_frame_1 - 0.035 13.9 0.2 0.039 13.8 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3410) bPH_3 PF14470.6 NODE_64520_length_249_cov_55.813084_g56579_i0reverse_frame_1 - 0.081 13.3 0.0 0.089 13.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial PH domain ATLF PF07737.11 NODE_64519_length_249_cov_57.149533_g56578_i0reverse_frame_1 - 0.013 14.8 0.4 0.014 14.7 0.4 1.0 1 0 0 1 1 1 0 Anthrax toxin lethal factor, N- and C-terminal domain SICA_beta PF12878.7 NODE_64519_length_249_cov_57.149533_g56578_i0reverse_frame_1 - 0.016 15.4 1.8 0.018 15.2 1.8 1.0 1 0 0 1 1 1 0 SICA extracellular beta domain DUF5550 PF17704.1 NODE_64518_length_249_cov_57.649533_g56577_i0reverse_frame_1 - 0.014 15.5 0.2 0.016 15.3 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5550) Amidase PF01425.21 NODE_64510_length_249_cov_79.957944_g56569_i0reverse_frame_1 - 0.045 12.7 0.0 0.054 12.5 0.0 1.1 1 0 0 1 1 1 0 Amidase AmpE PF17113.5 NODE_64490_length_249_cov_157.803738_g56549_i0forward_frame_1 - 0.013 14.8 0.0 0.082 12.2 0.0 1.8 1 1 1 2 2 2 0 Regulatory signalling modulator protein AmpE TILa PF12714.7 NODE_64483_length_249_cov_250.887850_g56542_i0reverse_frame_1 - 0.022 14.7 0.5 0.029 14.3 0.5 1.2 1 0 0 1 1 1 0 TILa domain PhoLip_ATPase_C PF16212.5 NODE_64477_length_249_cov_2454.971963_g56536_i0reverse_frame_1 - 0.013 15.3 0.2 0.013 15.3 0.2 1.0 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal DUF2207 PF09972.9 NODE_64477_length_249_cov_2454.971963_g56536_i0reverse_frame_1 - 0.11 11.3 0.0 0.12 11.2 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-3CxxC PF13695.6 NODE_64472_length_250_cov_0.823256_g56531_i0reverse_frame_3 - 0.0039 17.6 0.9 0.0045 17.4 0.9 1.1 1 0 0 1 1 1 1 Zinc-binding domain ABC_tran PF00005.27 NODE_64471_length_250_cov_0.837209_g56530_i0reverse_frame_2 - 0.0012 19.3 0.1 0.56 10.7 0.0 2.1 2 0 0 2 2 2 2 ABC transporter SbcCD_C PF13558.6 NODE_64471_length_250_cov_0.837209_g56530_i0reverse_frame_2 - 0.0076 16.5 0.0 0.018 15.3 0.0 1.6 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit GCM PF03615.15 NODE_64467_length_250_cov_0.916279_g56526_i0forward_frame_3 - 0.055 13.4 0.2 0.063 13.2 0.2 1.1 1 0 0 1 1 1 0 GCM motif protein LRR_4 PF12799.7 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_2 - 0.024 15.0 0.7 0.048 14.1 0.7 1.6 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) CHASE3 PF05227.13 NODE_64465_length_250_cov_0.930233_g56524_i0forward_frame_2 - 0.01 15.8 1.4 0.012 15.5 1.4 1.1 1 0 0 1 1 1 1 CHASE3 domain HTH_WhiA PF02650.14 NODE_64463_length_250_cov_1.037209_g56522_i0reverse_frame_3 - 0.11 12.9 0.1 0.13 12.7 0.1 1.3 1 1 0 1 1 1 0 WhiA C-terminal HTH domain BicD PF09730.9 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.026 13.0 0.4 0.027 12.9 0.4 1.0 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D DNA_repr_REX1B PF14966.6 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.043 14.5 0.2 0.75 10.5 0.0 2.0 1 1 1 2 2 2 0 DNA repair REX1-B Fib_alpha PF08702.10 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.047 13.9 0.5 0.054 13.7 0.5 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Prefoldin PF02996.17 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.048 13.6 0.9 0.17 11.8 0.4 1.9 1 1 1 2 2 2 0 Prefoldin subunit DUF3552 PF12072.8 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.056 12.8 0.0 0.058 12.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) YpjP PF14005.6 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.096 12.7 0.1 0.099 12.7 0.1 1.1 1 0 0 1 1 1 0 YpjP-like protein ParB PF08775.10 NODE_64461_length_250_cov_1.093023_g56520_i0reverse_frame_2 - 0.032 14.7 0.0 0.058 13.9 0.0 1.4 1 1 0 1 1 1 0 ParB family CAP160 PF07918.11 NODE_64461_length_250_cov_1.093023_g56520_i0reverse_frame_2 - 0.072 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 CAP160 repeat DUF5516 PF17637.2 NODE_64458_length_250_cov_1.106977_g56517_i0reverse_frame_3 - 0.053 13.3 0.1 0.09 12.5 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5516) SelR PF01641.18 NODE_64457_length_250_cov_1.106977_g56516_i0reverse_frame_2 - 6e-08 32.8 0.1 1.7e-07 31.4 0.1 1.7 1 1 0 1 1 1 1 SelR domain DUF2046 PF09755.9 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.00064 19.1 0.2 0.00068 19.0 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) Tropomyosin_1 PF12718.7 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.0016 18.6 0.1 0.0018 18.5 0.1 1.1 1 0 0 1 1 1 1 Tropomyosin like bZIP_2 PF07716.15 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.0053 16.8 2.9 0.053 13.6 0.7 2.2 2 0 0 2 2 2 1 Basic region leucine zipper BLOC1_2 PF10046.9 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.0073 16.6 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 PspB PF06667.12 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.0075 16.3 0.2 0.045 13.8 0.1 2.0 2 0 0 2 2 2 1 Phage shock protein B PhoU PF01895.19 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.012 16.1 0.0 0.014 15.8 0.0 1.1 1 0 0 1 1 1 0 PhoU domain ZapB PF06005.12 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.022 15.2 3.4 0.036 14.5 3.3 1.3 1 1 0 1 1 1 0 Cell division protein ZapB DASH_Spc19 PF08287.11 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.022 14.6 0.7 0.026 14.4 0.7 1.2 1 0 0 1 1 1 0 Spc19 FliD_C PF07195.12 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.034 13.6 0.2 0.039 13.4 0.2 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus DUF4988 PF16378.5 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.038 13.7 0.0 0.044 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function Acetyltransf_11 PF13720.6 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.075 13.5 0.3 0.098 13.1 0.3 1.3 1 1 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CLZ PF16526.5 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.088 13.2 2.0 0.7 10.3 0.3 2.0 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HSCB_C PF07743.13 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.22 12.0 2.4 0.41 11.2 2.4 1.5 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain SlyX PF04102.12 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.33 11.6 6.3 0.75 10.5 6.3 1.7 1 1 0 1 1 1 0 SlyX FlxA PF14282.6 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 7.9 6.5 12.8 12 6.0 8.7 2.0 1 1 1 2 2 2 0 FlxA-like protein RIF5_SNase_2 PF18189.1 NODE_64455_length_250_cov_1.111628_g56514_i0forward_frame_2 - 0.12 12.2 0.0 0.13 12.0 0.0 1.0 1 0 0 1 1 1 0 TbRIF5 SNase domain 2 Glyco_hydro_16 PF00722.21 NODE_64454_length_250_cov_1.111628_g56513_i0forward_frame_3 - 0.1 12.0 0.1 0.14 11.6 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 16 Plug_translocon PF10559.9 NODE_64453_length_250_cov_1.116279_g56512_i0forward_frame_3 - 0.11 12.4 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Plug domain of Sec61p zf_PR_Knuckle PF18445.1 NODE_64444_length_250_cov_1.227907_g56503_i0forward_frame_2 - 0.4 10.5 2.1 0.79 9.6 2.1 1.5 1 0 0 1 1 1 0 PR zinc knuckle motif TMEM190 PF15431.6 NODE_64436_length_250_cov_1.334884_g56495_i0forward_frame_2 - 0.089 12.9 0.1 0.091 12.9 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 190 DUF1743 PF08489.11 NODE_64435_length_250_cov_1.358140_g56494_i0reverse_frame_2 - 0.18 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1743) FNIP_N PF14636.6 NODE_64434_length_250_cov_1.362791_g56493_i0forward_frame_3 - 0.33 11.9 4.2 0.5 11.3 4.2 1.2 1 0 0 1 1 1 0 Folliculin-interacting protein N-terminus ASC PF00858.24 NODE_64433_length_250_cov_1.367442_g56492_i0forward_frame_3 - 1.1 8.1 4.1 1.2 8.0 4.1 1.0 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel DUF4046 PF13255.6 NODE_64431_length_250_cov_1.395349_g56490_i0forward_frame_3 - 0.064 13.8 0.1 0.07 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4046) Connexin PF00029.19 NODE_64428_length_250_cov_1.469767_g56487_i0forward_frame_2 - 0.14 11.8 0.0 0.15 11.8 0.0 1.0 1 0 0 1 1 1 0 Connexin FAM176 PF14851.6 NODE_64428_length_250_cov_1.469767_g56487_i0forward_frame_2 - 0.26 11.0 1.1 0.29 10.8 1.1 1.1 1 0 0 1 1 1 0 FAM176 family DNA_pol_phi PF04931.13 NODE_64428_length_250_cov_1.469767_g56487_i0forward_frame_2 - 0.34 9.0 4.5 0.35 8.9 4.5 1.0 1 0 0 1 1 1 0 DNA polymerase phi CPCFC PF17223.3 NODE_64427_length_250_cov_1.488372_g56486_i0forward_frame_2 - 0.048 13.4 3.5 0.08 12.7 3.5 1.4 1 0 0 1 1 1 0 Cuticle protein CPCFC DUF2016 PF09436.10 NODE_64425_length_250_cov_1.502326_g56484_i0forward_frame_2 - 0.082 12.7 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) ARF7EP_C PF14949.6 NODE_64424_length_250_cov_1.511628_g56483_i0forward_frame_2 - 0.13 12.9 1.1 0.15 12.6 1.1 1.2 1 0 0 1 1 1 0 ARF7 effector protein C-terminus BssC_TutF PF08201.11 NODE_64419_length_250_cov_1.576744_g56478_i0forward_frame_2 - 0.18 11.9 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 BssC/TutF protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks289.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks289.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks289.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks289.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- cNMP_binding PF00027.29 ORF77365 - 2.8e-05 24.1 0.0 5.6e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain N_NLPC_P60 PF12912.7 ORF74211 - 0.0047 17.3 0.1 0.011 16.1 0.1 1.6 1 0 0 1 1 1 1 NLPC_P60 stabilising domain, N term SURF2 PF05477.11 ORF74211 - 2.1 8.0 6.6 1.7 8.3 5.0 1.6 2 0 0 2 2 2 0 Surfeit locus protein 2 (SURF2) Presenilin PF01080.17 ORF74211 - 2.7 6.7 6.6 3.6 6.3 6.6 1.1 1 0 0 1 1 1 0 Presenilin FBPase PF00316.20 ORF73843 - 4.9e-34 117.5 0.0 1e-33 116.4 0.0 1.5 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Pyr_redox_2 PF07992.14 ORF65664 - 4.6e-52 177.1 0.0 5.6e-52 176.8 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 ORF65664 - 1.3e-21 76.9 0.1 3.2e-21 75.7 0.1 1.7 1 0 0 1 1 1 1 Reductase C-terminal Pyr_redox PF00070.27 ORF65664 - 7e-18 65.0 1.1 3.2e-15 56.4 0.1 2.7 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF65664 - 2e-09 36.7 6.5 0.0057 15.4 0.5 4.1 3 1 1 4 4 4 4 HI0933-like protein NAD_binding_8 PF13450.6 ORF65664 - 2e-07 31.1 0.5 0.0064 16.7 0.0 2.8 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 ORF65664 - 6.1e-07 28.8 1.8 0.1 11.6 0.5 3.1 3 0 0 3 3 3 2 Lycopene cyclase protein Pyr_redox_3 PF13738.6 ORF65664 - 1.4e-06 27.8 0.1 8.2e-05 22.0 0.1 2.6 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF65664 - 2.3e-06 27.0 0.1 0.077 12.1 0.0 2.9 2 1 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 ORF65664 - 4.2e-06 26.8 2.6 2.9 7.9 0.0 4.2 3 1 1 4 4 4 1 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 ORF65664 - 6.3e-06 26.6 0.1 0.027 14.9 0.3 3.0 2 1 1 3 3 3 2 Putative NAD(P)-binding DAO PF01266.24 ORF65664 - 5.7e-05 22.9 9.3 0.018 14.6 1.2 3.9 3 1 1 4 4 4 2 FAD dependent oxidoreductase Trp_halogenase PF04820.14 ORF65664 - 0.0026 16.7 6.3 0.096 11.5 0.1 3.1 3 0 0 3 3 3 1 Tryptophan halogenase GIDA PF01134.22 ORF65664 - 0.0027 16.8 1.9 0.93 8.5 0.8 2.6 2 1 0 2 2 2 2 Glucose inhibited division protein A 3HCDH_N PF02737.18 ORF65664 - 0.0098 15.8 0.1 0.0098 15.8 0.1 1.6 2 0 0 2 2 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Amino_oxidase PF01593.24 ORF65664 - 0.011 15.1 0.0 0.016 14.5 0.0 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase TrkA_N PF02254.18 ORF65664 - 0.013 15.7 5.3 0.076 13.3 0.2 3.1 3 0 0 3 3 3 0 TrkA-N domain Thi4 PF01946.17 ORF65664 - 0.014 14.7 0.9 0.42 9.8 0.1 3.0 3 0 0 3 3 3 0 Thi4 family 2-Hacid_dh_C PF02826.19 ORF65664 - 0.019 14.3 0.2 0.13 11.7 0.0 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF65664 - 0.039 14.0 2.2 4 7.5 0.1 2.5 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase XdhC_C PF13478.6 ORF65664 - 0.041 14.4 0.0 0.39 11.2 0.0 2.2 2 0 0 2 2 2 0 XdhC Rossmann domain FAD_binding_3 PF01494.19 ORF65664 - 0.056 12.7 2.5 2.8 7.1 0.0 2.5 2 1 0 3 3 3 0 FAD binding domain AlaDh_PNT_C PF01262.21 ORF65664 - 0.14 11.4 7.8 0.16 11.2 2.2 2.8 2 1 1 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 ORF65664 - 0.27 10.3 12.5 0.3 10.1 1.9 2.6 3 0 0 3 3 3 0 FAD binding domain FBPase PF00316.20 ORF62942 - 4.9e-34 117.5 0.0 1e-33 116.4 0.0 1.5 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain FBPase PF00316.20 ORF57737 - 4.9e-34 117.5 0.0 1e-33 116.4 0.0 1.5 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain KH_1 PF00013.29 ORF52303 - 5e-17 61.5 0.5 7e-17 61.0 0.5 1.2 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF52303 - 0.1 12.5 0.1 0.15 11.9 0.1 1.2 1 0 0 1 1 1 0 KH domain Pox_int_trans PF05718.12 ORF49458 - 0.14 10.8 0.0 0.21 10.3 0.0 1.1 1 0 0 1 1 1 0 Poxvirus intermediate transcription factor DUF4618 PF15397.6 ORF49458 - 0.69 9.3 13.3 0.02 14.3 5.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4618) LCD1 PF09798.9 ORF49458 - 0.89 8.0 5.0 1.1 7.8 5.0 1.1 1 0 0 1 1 1 0 DNA damage checkpoint protein ECM11 PF15463.6 ORF49458 - 2.9 8.5 9.8 0.42 11.2 3.9 2.5 2 1 0 2 2 2 0 Extracellular mutant protein 11 FMO-like PF00743.19 ORF4945 - 1.4e-41 142.6 7.2 1.2e-26 93.2 1.5 2.1 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF4945 - 7e-12 45.2 0.7 1.1e-07 31.4 0.2 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF4945 - 2.3e-08 33.6 0.6 1.5e-06 27.6 0.1 2.2 1 1 1 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 ORF4945 - 1.1e-06 28.1 0.0 1.5e-05 24.4 0.0 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 ORF4945 - 0.0015 18.6 0.1 0.11 12.4 0.0 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding DAO PF01266.24 ORF4945 - 0.0023 17.6 0.0 0.025 14.2 0.0 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 ORF4945 - 0.039 13.3 0.1 0.07 12.4 0.1 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Mqo PF06039.15 ORF4945 - 0.079 11.5 0.1 0.16 10.5 0.1 1.5 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) Ribonuc_red_lgN PF00317.21 ORF4945 - 0.13 12.3 0.0 0.49 10.4 0.0 2.0 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain IFT46_B_C PF12317.8 ORF35749 - 7.9e-79 264.3 2.3 7.9e-79 264.3 2.3 1.5 2 0 0 2 2 2 1 Intraflagellar transport complex B protein 46 C terminal Anoctamin PF04547.12 ORF35397 - 9.4e-07 28.0 0.9 1.3e-06 27.6 0.9 1.3 1 1 0 1 1 1 1 Calcium-activated chloride channel PHM7_cyt PF14703.6 ORF35397 - 0.068 13.4 0.1 0.16 12.2 0.1 1.7 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter YtpI PF14007.6 ORF35397 - 0.44 10.7 6.3 0.48 10.6 2.0 2.9 2 1 1 3 3 3 0 YtpI-like protein DUF898 PF05987.13 ORF35397 - 3.3 6.7 12.9 0.45 9.5 4.7 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF898) CPSF_A PF03178.15 ORF22207 - 7.8e-39 133.9 0.0 1.1e-38 133.4 0.0 1.0 1 0 0 1 1 1 1 CPSF A subunit region CNH PF00780.22 ORF22207 - 0.12 12.0 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 CNH domain 3Beta_HSD PF01073.19 ORF20134 - 9.2e-22 77.4 0.0 1.3e-21 76.8 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF20134 - 2.2e-20 73.2 0.1 5.6e-20 71.8 0.1 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF20134 - 2e-13 50.7 0.0 2.2e-12 47.2 0.0 2.1 1 1 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 ORF20134 - 3.4e-13 49.4 0.0 5.4e-13 48.7 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein GDP_Man_Dehyd PF16363.5 ORF20134 - 2.7e-10 40.2 0.1 6.4e-10 38.9 0.1 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 ORF20134 - 6.8e-07 28.7 0.0 1e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 ORF20134 - 8.8e-06 25.0 0.2 3.4e-05 23.1 0.1 1.9 2 0 0 2 2 2 1 RmlD substrate binding domain KR PF08659.10 ORF20134 - 0.00013 21.9 0.0 0.00034 20.6 0.0 1.7 1 1 0 1 1 1 1 KR domain NmrA PF05368.13 ORF20134 - 0.0085 15.7 0.0 0.023 14.3 0.0 1.7 2 0 0 2 2 2 1 NmrA-like family adh_short PF00106.25 ORF20134 - 0.061 12.8 0.0 0.99 8.8 0.0 2.7 3 1 0 3 3 3 0 short chain dehydrogenase Macro PF01661.21 ORF20134 - 0.074 13.1 0.2 0.18 11.8 0.1 1.7 1 1 0 1 1 1 0 Macro domain Semialdhyde_dh PF01118.24 ORF20134 - 0.092 13.2 0.0 0.21 12.0 0.0 1.7 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain SRP54_N PF02881.19 ORF20134 - 0.72 10.1 3.4 9.1 6.6 0.1 3.5 4 0 0 4 4 3 0 SRP54-type protein, helical bundle domain DNA_pol_alpha_N PF12254.8 ORF20134 - 8 6.6 10.2 10 6.3 3.0 2.7 2 0 0 2 2 2 0 DNA polymerase alpha subunit p180 N terminal Cyt-b5 PF00173.28 ORF18891 - 4.4e-16 58.8 0.0 8.6e-16 57.9 0.0 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ni_hydr_CYTB PF01292.20 ORF18891 - 1.4e-12 47.6 0.2 2.2e-12 47.0 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 ORF18891 - 0.013 15.6 0.2 0.044 13.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) DUF2231 PF09990.9 ORF18891 - 0.029 14.8 0.2 0.063 13.7 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Ferric_reduct PF01794.19 ORF18891 - 2.4 8.3 6.2 2.5 8.3 0.3 2.6 2 1 1 3 3 3 0 Ferric reductase like transmembrane component ANTH PF07651.16 ORF14420 - 4.9e-07 29.0 3.4 1.1e-06 27.8 3.4 1.6 1 0 0 1 1 1 1 ANTH domain Vps51 PF08700.11 ORF14420 - 0.00054 20.0 5.5 0.13 12.3 0.3 3.0 2 1 0 2 2 2 2 Vps51/Vps67 DUF5070 PF16802.5 ORF14420 - 0.13 12.3 0.9 2.7 8.0 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5070) Cyt-b5 PF00173.28 ORF108991 - 4.4e-16 58.8 0.0 8.6e-16 57.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ni_hydr_CYTB PF01292.20 ORF108991 - 2.9e-12 46.6 0.2 4.4e-12 46.0 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 ORF108991 - 0.013 15.6 0.2 0.044 13.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) DUF2231 PF09990.9 ORF108991 - 0.028 14.8 0.2 0.063 13.7 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Ferric_reduct PF01794.19 ORF108991 - 2.6 8.2 6.3 2.5 8.3 0.3 2.6 2 1 1 3 3 3 0 Ferric reductase like transmembrane component LRR_6 PF13516.6 ORF106564 - 9.2e-11 40.9 4.5 0.00048 20.0 0.2 3.7 4 0 0 4 4 4 2 Leucine Rich repeat LRR_4 PF12799.7 ORF106564 - 0.0002 21.7 1.1 0.0012 19.1 0.8 2.4 2 1 1 3 3 3 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF106564 - 0.0018 18.0 1.2 0.066 13.0 0.9 2.8 2 1 0 2 2 2 1 Leucine rich repeat AMH_N PF04709.12 ORF106564 - 0.12 11.3 1.9 0.12 11.2 0.4 1.7 2 0 0 2 2 2 0 Anti-Mullerian hormone, N terminal region LRR_1 PF00560.33 ORF106564 - 0.55 11.0 6.6 3.2 8.6 0.1 4.0 4 0 0 4 4 4 0 Leucine Rich Repeat Cyt-b5 PF00173.28 ORF102076 - 4.4e-16 58.8 0.0 8.6e-16 57.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ni_hydr_CYTB PF01292.20 ORF102076 - 7e-13 48.6 0.2 1.1e-12 47.9 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 ORF102076 - 0.016 15.4 0.1 0.05 13.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) DUF2231 PF09990.9 ORF102076 - 0.025 15.0 0.2 0.054 13.9 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Cytochrom_B561 PF03188.16 ORF102076 - 0.039 14.1 0.3 0.059 13.5 0.3 1.3 1 0 0 1 1 1 0 Eukaryotic cytochrome b561 Ferric_reduct PF01794.19 ORF102076 - 2.4 8.3 5.9 3.2 7.9 0.3 2.6 2 1 1 3 3 3 0 Ferric reductase like transmembrane component DivIVA PF05103.13 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 0.019 15.1 5.1 0.059 13.4 1.8 2.5 2 0 0 2 2 2 0 DivIVA protein DivIC PF04977.15 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 0.066 13.0 0.1 0.066 13.0 0.1 2.9 3 0 0 3 3 3 0 Septum formation initiator AstE_AspA PF04952.14 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 0.12 11.4 0.1 0.18 10.9 0.1 1.2 1 0 0 1 1 1 0 Succinylglutamate desuccinylase / Aspartoacylase family TPR_MLP1_2 PF07926.12 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 0.21 11.7 5.6 13 5.9 0.0 2.5 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein SYCE1 PF15233.6 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 0.21 11.6 8.2 8.1 6.5 5.3 2.7 2 0 0 2 2 2 0 Synaptonemal complex central element protein 1 Fib_alpha PF08702.10 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 0.68 10.1 13.1 0.43 10.8 4.4 2.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Seryl_tRNA_N PF02403.22 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 0.86 9.9 14.7 3.2 8.0 4.4 2.9 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain FlaC_arch PF05377.11 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 0.95 9.9 9.9 0.43 11.0 0.5 3.7 2 1 2 4 4 4 0 Flagella accessory protein C (FlaC) RPW8 PF05659.11 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 1.1 8.9 10.6 0.14 11.8 2.0 2.9 2 1 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF2203 PF09969.9 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 1.2 9.9 5.2 3.2 8.5 0.7 2.9 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) DUF4404 PF14357.6 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 1.5 9.6 4.4 0.81 10.4 1.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4404) DUF2408 PF10303.9 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 1.9 9.1 9.1 18 5.9 9.0 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) ZapB PF06005.12 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 2.5 8.6 9.2 1 9.8 2.0 2.8 1 1 1 2 2 2 0 Cell division protein ZapB IFP_35_N PF07334.13 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 2.5 8.2 8.6 1.5 8.9 0.4 3.2 2 1 1 3 3 3 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus APG6_N PF17675.1 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 2.6 8.6 9.5 9.8 6.7 1.9 2.7 3 0 0 3 3 3 0 Apg6 coiled-coil region YabA PF06156.13 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 2.8 8.6 9.0 11 6.8 0.3 2.8 1 1 0 2 2 2 0 Initiation control protein YabA DUF641 PF04859.12 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 3.2 8.1 8.1 5.1 7.5 2.4 2.6 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) TMF_TATA_bd PF12325.8 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_3 - 4.3 7.6 12.4 7.9 6.7 0.0 3.1 3 1 0 3 3 3 0 TATA element modulatory factor 1 TATA binding YabA PF06156.13 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_2 - 0.22 12.1 8.5 0.48 11.1 1.1 2.5 2 0 0 2 2 2 0 Initiation control protein YabA Yuri_gagarin PF15934.5 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_2 - 0.67 9.8 15.3 2 8.2 0.9 2.2 1 1 1 2 2 2 0 Yuri gagarin UPF0242 PF06785.11 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_2 - 0.91 9.6 18.1 0.32 11.1 3.1 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus ZapB PF06005.12 NODE_13696_length_1199_cov_5.572165_g10265_i0reverse_frame_2 - 4.8 7.7 18.0 7 7.2 3.5 2.6 2 1 0 2 2 2 0 Cell division protein ZapB GST_C_3 PF14497.6 ORF98300 - 1.1e-11 44.7 0.0 7.8e-05 22.8 0.0 2.3 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF98300 - 1.1e-09 38.1 0.7 0.0019 18.1 0.2 2.5 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF98300 - 4.6e-09 36.4 0.0 0.00029 21.0 0.0 2.3 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF98300 - 0.0004 20.9 0.0 0.00083 19.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF98300 - 0.044 14.1 0.0 0.19 12.1 0.0 2.0 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain Glutaredoxin2_C PF04399.13 ORF98300 - 0.061 13.2 0.0 0.74 9.7 0.0 2.2 2 0 0 2 2 2 0 Glutaredoxin 2, C terminal domain DUF3539 PF12058.8 ORF83422 - 5.6 7.2 5.9 13 6.0 5.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3539) Kelch_4 PF13418.6 ORF79136 - 4e-15 55.6 21.9 0.00074 19.5 0.1 6.8 8 0 0 8 8 8 5 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF79136 - 3.7e-12 45.6 4.0 0.082 12.5 1.0 5.4 5 0 0 5 5 5 3 Kelch motif Kelch_3 PF13415.6 ORF79136 - 2.7e-10 40.3 10.1 0.00021 21.5 0.6 5.5 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF79136 - 3.6e-10 39.6 7.8 0.00012 22.0 0.1 5.2 5 0 0 5 5 5 2 Kelch motif Kelch_6 PF13964.6 ORF79136 - 7.8e-09 35.5 14.0 0.32 11.3 0.1 6.2 5 1 1 6 6 6 3 Kelch motif Kelch_2 PF07646.15 ORF79136 - 0.012 15.6 8.8 7.3 6.7 0.0 5.2 6 1 0 6 6 6 0 Kelch motif NdhS PF11623.8 ORF79136 - 0.14 11.9 0.1 0.37 10.5 0.1 1.7 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S LRR_6 PF13516.6 ORF69756 - 5.9e-13 47.7 1.5 7.9e-05 22.4 0.0 4.1 4 0 0 4 4 4 3 Leucine Rich repeat LRR_1 PF00560.33 ORF69756 - 9.5e-05 22.4 0.4 2.1 9.2 0.0 3.8 3 0 0 3 3 3 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF69756 - 0.0004 20.7 2.6 0.23 11.9 0.4 2.9 2 1 1 3 3 3 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF69756 - 0.4 10.5 2.9 4.1 7.2 1.2 3.0 2 1 0 2 2 2 0 Leucine rich repeat Hepar_II_III PF07940.13 ORF64414 - 0.023 14.3 0.0 0.041 13.5 0.0 1.3 1 0 0 1 1 1 0 Heparinase II/III-like protein DUF3539 PF12058.8 ORF62406 - 5.6 7.2 5.9 13 6.0 5.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3539) Pkinase PF00069.25 ORF43363 - 2e-51 174.9 0.0 3.6e-51 174.1 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF43363 - 4.8e-19 68.6 0.0 7.2e-19 68.1 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF43363 - 1.8e-10 39.6 0.3 2.3e-06 26.7 0.9 2.8 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF43363 - 2.7e-10 39.3 0.5 0.00019 21.1 0.1 2.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF43363 - 1.7e-08 34.8 2.9 3.2e-08 33.9 0.7 2.4 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF43363 - 2.4e-07 30.5 2.7 2.3e-06 27.4 0.9 2.7 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF43363 - 6.1e-07 28.7 0.1 0.00034 20.0 0.3 2.5 2 0 0 2 2 2 2 EF hand Kinase-like PF14531.6 ORF43363 - 2.8e-06 26.9 0.1 5.9e-06 25.8 0.0 1.6 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF43363 - 0.0017 17.7 0.0 0.0029 17.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF43363 - 0.019 14.9 0.0 0.041 13.8 0.0 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family SPARC_Ca_bdg PF10591.9 ORF43363 - 0.15 12.4 0.6 0.87 9.9 0.1 2.5 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region PPTA PF01239.22 ORF43015 - 1.6e-39 132.5 13.6 2.2e-09 36.7 0.1 5.6 5 0 0 5 5 5 5 Protein prenyltransferase alpha subunit repeat Vfa1 PF08432.10 ORF43015 - 7.8 6.8 15.8 0.92 9.8 8.5 2.2 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 Abhydrolase_1 PF00561.20 ORF32188 - 8.4e-11 42.0 0.0 3.2e-08 33.5 0.0 2.3 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF32188 - 3.3e-08 33.1 0.0 4.3e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF676 PF05057.14 ORF32188 - 0.00081 19.0 0.0 0.0013 18.3 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF915 PF06028.11 ORF32188 - 0.0079 15.6 0.1 0.02 14.2 0.0 1.7 1 1 1 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) LIDHydrolase PF10230.9 ORF32188 - 0.0082 15.7 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Cutinase PF01083.22 ORF32188 - 0.015 15.3 0.0 0.022 14.7 0.0 1.3 1 0 0 1 1 1 0 Cutinase DUF900 PF05990.12 ORF32188 - 0.12 11.9 0.0 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) DUF3530 PF12048.8 ORF32188 - 0.18 11.2 0.0 0.94 8.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3530) Ank_2 PF12796.7 ORF27459 - 2.4e-43 146.6 4.2 2.1e-09 37.8 0.0 5.7 1 1 5 6 6 6 6 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF27459 - 1.1e-31 108.8 7.7 4.8e-09 36.6 0.0 7.4 4 3 3 7 7 7 7 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF27459 - 1.1e-25 89.3 8.5 8.6e-10 38.7 0.1 6.5 4 3 4 8 8 8 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF27459 - 1.6e-24 85.2 5.1 3.3e-05 24.1 0.1 8.7 10 0 0 10 10 10 6 Ankyrin repeat Ank_3 PF13606.6 ORF27459 - 3.4e-22 76.1 5.5 0.0002 21.5 0.1 8.9 10 0 0 10 10 10 5 Ankyrin repeat PSI_PsaF PF02507.15 ORF25393 - 0.06 13.2 0.2 0.54 10.1 0.1 2.4 3 0 0 3 3 3 0 Photosystem I reaction centre subunit III Transket_pyr PF02779.24 ORF20921 - 1.5e-37 129.0 0.0 2.4e-37 128.3 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF20921 - 1.3e-23 83.2 0.0 2.3e-23 82.4 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain VIT PF08487.10 NODE_13755_length_1196_cov_647.428941_g613_i2reverse_frame_2 - 6.5e-27 93.9 0.1 1.6e-25 89.5 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VIT_2 PF13757.6 NODE_13755_length_1196_cov_647.428941_g613_i2reverse_frame_2 - 3.8e-09 36.3 0.0 7.6e-09 35.3 0.0 1.4 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VWA_2 PF13519.6 NODE_13755_length_1196_cov_647.428941_g613_i2reverse_frame_2 - 6.5e-08 33.2 0.0 1.4e-07 32.1 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 NODE_13755_length_1196_cov_647.428941_g613_i2reverse_frame_2 - 7e-06 26.1 0.0 1.1e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 NODE_13755_length_1196_cov_647.428941_g613_i2reverse_frame_2 - 1.6e-05 25.3 0.0 3.2e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain PfkB PF00294.24 NODE_13750_length_1197_cov_3.549914_g10308_i0reverse_frame_3 - 0.0017 17.8 0.0 0.0034 16.7 0.0 1.5 1 1 0 1 1 1 1 pfkB family carbohydrate kinase LPAM_2 PF13627.6 NODE_13750_length_1197_cov_3.549914_g10308_i0reverse_frame_3 - 6.2 6.8 7.6 0.16 11.9 1.0 1.8 2 0 0 2 2 2 0 Prokaryotic lipoprotein-attachment site Afaf PF15339.6 NODE_13745_length_1197_cov_112.638554_g10303_i0reverse_frame_3 - 3.7 7.2 6.3 1.1 8.9 1.0 2.3 1 1 2 3 3 3 0 Acrosome formation-associated factor zf-rbx1 PF12678.7 NODE_13745_length_1197_cov_112.638554_g10303_i0forward_frame_2 - 0.15 12.4 0.0 0.34 11.2 0.0 1.6 1 0 0 1 1 1 0 RING-H2 zinc finger domain DXP_reductoisom PF02670.16 ORF92546 - 6.8e-50 169.1 0.7 6.8e-50 169.1 0.7 1.6 2 0 0 2 2 2 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DXPR_C PF13288.6 ORF92546 - 8.5e-42 142.1 0.2 2.3e-41 140.7 0.2 1.8 1 0 0 1 1 1 1 DXP reductoisomerase C-terminal domain DXP_redisom_C PF08436.12 ORF92546 - 1.4e-36 124.5 0.0 3e-36 123.5 0.0 1.6 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RRM_1 PF00076.22 ORF88266 - 8.1e-21 73.6 0.0 2.5e-09 36.8 0.0 3.2 3 0 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RBM39linker PF15519.6 ORF88266 - 7e-05 23.8 0.0 0.00019 22.5 0.0 1.7 1 0 0 1 1 1 1 linker between RRM2 and RRM3 domains in RBM39 protein RRM_3 PF08777.11 ORF88266 - 0.0031 17.5 0.0 0.014 15.4 0.0 2.0 2 0 0 2 2 2 1 RNA binding motif Nup35_RRM_2 PF14605.6 ORF88266 - 0.0081 16.1 0.1 3.9 7.6 0.0 3.2 3 0 0 3 3 3 1 Nup53/35/40-type RNA recognition motif DUF1866 PF08952.11 ORF88266 - 0.08 12.8 0.0 7.9 6.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1866) Cpn60_TCP1 PF00118.24 ORF82798 - 4.9e-105 352.0 4.4 5.6e-105 351.8 4.4 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Herpes_UL6 PF01763.16 ORF82798 - 0.19 10.2 0.7 0.71 8.3 0.0 2.1 3 0 0 3 3 3 0 Herpesvirus UL6 like WD40 PF00400.32 ORF82047 - 6e-12 45.9 5.6 4.2e-08 33.7 1.0 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat FOP_dimer PF09398.10 ORF82047 - 0.071 13.4 0.7 0.55 10.5 0.0 2.5 2 0 0 2 2 2 0 FOP N terminal dimerisation domain ANAPC4_WD40 PF12894.7 ORF82047 - 0.073 13.4 0.3 12 6.3 0.1 2.7 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Rsa3 PF14615.6 ORF82047 - 0.2 11.2 2.8 2 8.0 0.0 2.9 3 0 0 3 3 3 0 Ribosome-assembly protein 3 V_ATPase_I PF01496.19 ORF82047 - 4.2 5.2 14.1 6 4.6 14.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fib_alpha PF08702.10 ORF82047 - 4.3 7.5 18.3 0.27 11.4 10.9 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family SbcCD_C PF13558.6 ORF78340 - 6e-16 58.5 0.0 1.3e-15 57.3 0.0 1.6 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 ORF78340 - 0.016 14.9 0.2 0.051 13.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain Atg14 PF10186.9 ORF78340 - 0.25 10.4 4.4 0.34 9.9 4.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 ORF78340 - 0.54 9.8 5.1 0.77 9.3 5.1 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit PSD4 PF07631.11 ORF78340 - 0.84 10.2 6.8 3.6 8.2 0.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1592) zf-C4H2 PF10146.9 ORF78340 - 4.1 7.6 7.8 5.8 7.2 7.0 1.6 1 1 0 1 1 1 0 Zinc finger-containing protein T2SSF PF00482.23 ORF75576 - 4.5e-54 181.7 7.0 1.5e-29 102.5 0.1 2.4 2 0 0 2 2 2 2 Type II secretion system (T2SS), protein F UPF0093 PF03653.13 ORF75576 - 0.0083 16.4 1.2 0.15 12.3 0.1 2.5 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0093) HABP4_PAI-RBP1 PF04774.15 ORF75152 - 3.9e-06 27.7 14.6 3.9e-06 27.7 14.6 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family RRM_1 PF00076.22 ORF67580 - 8.1e-21 73.6 0.0 2.5e-09 36.8 0.0 3.2 3 0 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RBM39linker PF15519.6 ORF67580 - 7e-05 23.8 0.0 0.00019 22.5 0.0 1.7 1 0 0 1 1 1 1 linker between RRM2 and RRM3 domains in RBM39 protein RRM_3 PF08777.11 ORF67580 - 0.0031 17.5 0.0 0.014 15.4 0.0 2.0 2 0 0 2 2 2 1 RNA binding motif Nup35_RRM_2 PF14605.6 ORF67580 - 0.0081 16.1 0.1 3.9 7.6 0.0 3.2 3 0 0 3 3 3 1 Nup53/35/40-type RNA recognition motif DUF1866 PF08952.11 ORF67580 - 0.08 12.8 0.0 7.9 6.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1866) TPR_2 PF07719.17 ORF63231 - 2.1e-06 27.4 1.5 0.033 14.3 0.2 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF63231 - 7.1e-05 22.7 0.2 0.01 16.0 0.1 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF63231 - 0.0022 17.7 0.5 3.1 7.8 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF63231 - 0.02 15.0 0.2 1 9.5 0.1 2.4 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_9 PF13371.6 ORF63231 - 0.2 11.8 6.5 0.038 14.1 2.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat PhoU PF01895.19 ORF57532 - 0.18 12.3 2.6 3.6 8.1 0.1 2.8 2 0 0 2 2 2 0 PhoU domain PDZ_6 PF17820.1 ORF54638 - 4.6e-06 26.4 0.0 2e-05 24.3 0.0 2.0 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF54638 - 0.00066 20.0 0.0 0.0016 18.8 0.0 1.6 1 0 0 1 1 1 1 PDZ domain EF-hand_7 PF13499.6 ORF53646 - 1.1e-12 48.2 10.4 0.00036 20.9 2.1 4.2 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_1 PF00036.32 ORF53646 - 1.3e-11 43.2 15.5 0.02 14.4 2.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF53646 - 1.3e-09 37.2 9.1 0.06 13.3 0.0 5.2 5 0 0 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF53646 - 1.6e-08 34.2 14.2 0.0028 17.5 1.9 4.5 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF53646 - 0.011 15.2 7.4 0.68 9.5 0.0 4.2 5 0 0 5 5 5 0 EF hand EF-hand_4 PF12763.7 ORF53646 - 0.041 13.8 8.6 0.066 13.2 0.3 3.5 4 0 0 4 4 4 0 Cytoskeletal-regulatory complex EF hand HGTP_anticodon2 PF12745.7 ORF53646 - 0.081 12.4 0.2 0.18 11.3 0.2 1.5 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs SPARC_Ca_bdg PF10591.9 ORF53646 - 0.088 13.1 0.5 33 4.8 0.1 3.3 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region DUF3515 PF12028.8 ORF53646 - 0.15 11.8 0.0 0.35 10.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3515) WD40 PF00400.32 ORF52150 - 6e-12 45.9 5.6 4.2e-08 33.7 1.0 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat FOP_dimer PF09398.10 ORF52150 - 0.071 13.4 0.7 0.55 10.5 0.0 2.5 2 0 0 2 2 2 0 FOP N terminal dimerisation domain ANAPC4_WD40 PF12894.7 ORF52150 - 0.073 13.4 0.3 12 6.3 0.1 2.7 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Rsa3 PF14615.6 ORF52150 - 0.2 11.2 2.8 2 8.0 0.0 2.9 3 0 0 3 3 3 0 Ribosome-assembly protein 3 V_ATPase_I PF01496.19 ORF52150 - 4.2 5.2 14.1 6 4.6 14.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fib_alpha PF08702.10 ORF52150 - 4.3 7.5 18.3 0.27 11.4 10.9 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family WD40 PF00400.32 ORF44223 - 6e-12 45.9 5.6 4.2e-08 33.7 1.0 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat FOP_dimer PF09398.10 ORF44223 - 0.071 13.4 0.7 0.55 10.5 0.0 2.5 2 0 0 2 2 2 0 FOP N terminal dimerisation domain ANAPC4_WD40 PF12894.7 ORF44223 - 0.073 13.4 0.3 12 6.3 0.1 2.7 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Rsa3 PF14615.6 ORF44223 - 0.2 11.2 2.8 2 8.0 0.0 2.9 3 0 0 3 3 3 0 Ribosome-assembly protein 3 V_ATPase_I PF01496.19 ORF44223 - 4.2 5.2 14.1 6 4.6 14.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fib_alpha PF08702.10 ORF44223 - 4.3 7.5 18.3 0.27 11.4 10.9 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Octopine_DH PF02317.17 ORF43478 - 9.7e-35 119.9 0.0 1.3e-34 119.4 0.0 1.2 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain EF-hand_7 PF13499.6 ORF24762 - 1.1e-12 48.2 10.4 0.00036 20.9 2.1 4.2 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_1 PF00036.32 ORF24762 - 1.3e-11 43.2 15.5 0.02 14.4 2.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF24762 - 1.3e-09 37.2 9.1 0.06 13.3 0.0 5.2 5 0 0 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF24762 - 1.6e-08 34.2 14.2 0.0028 17.5 1.9 4.5 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF24762 - 0.011 15.2 7.4 0.68 9.5 0.0 4.2 5 0 0 5 5 5 0 EF hand EF-hand_4 PF12763.7 ORF24762 - 0.041 13.8 8.6 0.066 13.2 0.3 3.5 4 0 0 4 4 4 0 Cytoskeletal-regulatory complex EF hand HGTP_anticodon2 PF12745.7 ORF24762 - 0.081 12.4 0.2 0.18 11.3 0.2 1.5 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs SPARC_Ca_bdg PF10591.9 ORF24762 - 0.088 13.1 0.5 33 4.8 0.1 3.3 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region DUF3515 PF12028.8 ORF24762 - 0.15 11.8 0.0 0.35 10.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3515) Ank_2 PF12796.7 ORF23764 - 3.5e-14 53.1 0.2 6.3e-12 45.9 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) FYVE PF01363.21 ORF23764 - 5.1e-13 49.0 2.0 1.4e-12 47.5 2.0 1.8 1 1 0 1 1 1 1 FYVE zinc finger Ank_4 PF13637.6 ORF23764 - 8.8e-13 48.5 0.0 1.4e-08 35.1 0.0 3.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF23764 - 1.4e-12 46.6 0.3 0.0001 22.4 0.0 3.9 4 1 0 4 4 4 2 Ankyrin repeat Ank PF00023.30 ORF23764 - 4.3e-11 42.7 0.9 0.0022 18.4 0.0 4.3 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF23764 - 9.9e-11 41.7 0.4 2.3e-08 34.2 0.1 3.5 3 1 1 4 4 4 2 Ankyrin repeats (many copies) zf-B_box PF00643.24 ORF23764 - 0.74 10.0 5.7 2.3 8.4 5.7 1.9 1 1 0 1 1 1 0 B-box zinc finger ZZ PF00569.17 ORF23764 - 1.7 8.5 6.6 5 7.0 6.6 1.8 1 0 0 1 1 1 0 Zinc finger, ZZ type Esterase PF00756.20 ORF23632 - 2.9e-18 66.4 0.0 1.2e-17 64.4 0.0 1.8 1 1 0 1 1 1 1 Putative esterase CBM_48 PF02922.18 ORF23632 - 4.3e-08 33.4 0.1 9.9e-08 32.2 0.1 1.5 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Abhydrolase_2 PF02230.16 ORF23632 - 0.091 12.5 0.0 1.1 9.0 0.0 2.2 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase OmpA PF00691.20 ORF18272 - 5.8e-05 23.4 0.1 0.00051 20.4 0.0 2.4 2 1 0 2 2 2 1 OmpA family PaREP1 PF05942.11 ORF18272 - 0.0031 17.4 0.2 0.011 15.7 0.2 1.9 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family Baculo_PEP_C PF04513.12 ORF18272 - 0.028 14.5 2.0 0.028 14.5 2.0 2.5 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Apo-CIII PF05778.12 ORF18272 - 0.032 13.8 2.4 0.27 10.9 2.3 2.6 1 1 0 1 1 1 0 Apolipoprotein CIII (Apo-CIII) RtcR PF06956.11 ORF18272 - 0.066 12.6 1.7 0.079 12.4 0.1 1.8 2 1 0 2 2 2 0 Regulator of RNA terminal phosphate cyclase REV1_C PF16727.5 ORF18272 - 0.22 11.9 5.7 0.37 11.2 0.1 3.1 3 1 0 3 3 3 0 DNA repair protein REV1 C-terminal domain LPP20 PF02169.16 ORF18272 - 0.34 11.3 4.8 3.1 8.2 5.2 2.4 2 0 0 2 2 2 0 LPP20 lipoprotein Nsp1_C PF05064.13 ORF18272 - 1.8 8.4 11.8 0.31 10.9 3.0 2.5 2 0 0 2 2 2 0 Nsp1-like C-terminal region STAT_int PF02865.17 ORF18272 - 2.5 8.6 10.6 0.11 13.0 2.6 2.3 2 0 0 2 2 2 0 STAT protein, protein interaction domain CcdA PF07362.12 ORF18272 - 2.6 8.6 8.4 0.14 12.7 1.5 2.6 3 0 0 3 3 3 0 Post-segregation antitoxin CcdA ApoLp-III PF07464.11 ORF18272 - 4 7.5 19.3 1 9.4 10.3 2.9 2 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) KELK PF15796.5 ORF18272 - 6.1 7.4 11.5 0.43 11.1 1.2 3.2 3 0 0 3 3 3 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase LMBR1 PF04791.16 ORF18272 - 9.2 5.0 8.5 8.5 5.2 0.1 2.0 1 1 0 2 2 2 0 LMBR1-like membrane protein Bestrophin PF01062.21 ORF17721 - 2.6e-06 27.0 0.2 4e-06 26.5 0.2 1.2 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel ThrE PF06738.12 ORF107270 - 0.0034 16.8 1.0 2.1 7.6 0.1 2.3 2 0 0 2 2 2 2 Putative threonine/serine exporter TMEM132D_C PF15706.5 ORF107270 - 0.031 14.1 1.7 9.4 6.1 0.1 2.9 3 0 0 3 3 3 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF3493 PF11998.8 ORF107270 - 0.095 12.9 1.5 7.9 6.7 0.1 2.9 3 0 0 3 3 3 0 Low psii accumulation1 / Rep27 PspC PF04024.12 ORF107270 - 7.3 6.5 10.7 9.6 6.1 0.0 3.7 3 0 0 3 3 3 0 PspC domain Kelch_3 PF13415.6 ORF106323 - 3.6e-24 84.5 11.7 7.3e-07 29.3 0.1 6.6 7 0 0 7 7 7 4 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF106323 - 4.1e-23 81.1 11.1 1.5e-06 28.1 0.0 6.6 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF106323 - 1e-18 66.9 9.6 6.9e-07 29.3 0.0 6.8 6 1 1 7 7 7 3 Kelch motif Kelch_1 PF01344.25 ORF106323 - 2.4e-17 62.2 10.4 4.5e-09 35.8 0.0 5.4 5 0 0 5 5 5 4 Kelch motif Kelch_5 PF13854.6 ORF106323 - 1.3e-16 60.2 0.4 9.8e-08 31.8 0.0 5.3 5 0 0 5 5 5 2 Kelch motif Kelch_2 PF07646.15 ORF106323 - 7.6e-08 32.0 8.5 8.6e-05 22.4 0.0 5.4 6 1 0 6 6 6 2 Kelch motif RAG2 PF03089.14 ORF106323 - 0.013 14.6 0.0 0.16 10.9 0.0 2.5 2 1 1 3 3 3 0 Recombination activating protein 2 Ion_trans PF00520.31 ORF105098 - 5.3e-16 58.6 7.4 9.5e-16 57.8 7.4 1.3 1 0 0 1 1 1 1 Ion transport protein cNMP_binding PF00027.29 ORF105098 - 1.2e-13 50.9 0.0 2.1e-13 50.1 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Ion_trans_2 PF07885.16 ORF105098 - 0.00024 21.0 10.1 0.00082 19.3 9.8 2.0 1 1 1 2 2 2 1 Ion channel zf-CCHC PF00098.23 ORF105098 - 0.028 14.5 0.0 0.064 13.4 0.0 1.6 1 0 0 1 1 1 0 Zinc knuckle Esterase PF00756.20 ORF103197 - 2.9e-18 66.4 0.0 1.2e-17 64.4 0.0 1.8 1 1 0 1 1 1 1 Putative esterase CBM_48 PF02922.18 ORF103197 - 4.3e-08 33.4 0.1 9.9e-08 32.2 0.1 1.5 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Abhydrolase_2 PF02230.16 ORF103197 - 0.091 12.5 0.0 1.1 9.0 0.0 2.2 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase Cyclotide PF03784.13 NODE_13804_length_1194_cov_6466.457291_g10352_i0forward_frame_3 - 0.029 14.4 0.9 0.066 13.3 0.9 1.6 1 0 0 1 1 1 0 Cyclotide family Peptidase_C1 PF00112.23 NODE_13804_length_1194_cov_6466.457291_g10352_i0forward_frame_2 - 6.9e-80 268.2 3.9 9.1e-80 267.8 3.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 NODE_13804_length_1194_cov_6466.457291_g10352_i0forward_frame_2 - 5.2e-12 46.0 1.7 7.8e-12 45.5 1.7 1.3 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 NODE_13804_length_1194_cov_6466.457291_g10352_i0forward_frame_2 - 0.00011 21.2 2.7 0.087 11.6 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Ion_trans PF00520.31 ORF88794 - 1.6e-22 79.9 7.5 2.6e-22 79.3 7.5 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF88794 - 2.5e-09 36.9 6.8 2.5e-09 36.9 6.8 2.0 2 0 0 2 2 2 1 Ion channel EF-hand_1 PF00036.32 ORF88794 - 8.1e-05 21.9 0.2 0.00049 19.4 0.2 2.4 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF88794 - 0.00012 21.8 0.1 0.00033 20.4 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF88794 - 0.00045 20.6 0.1 0.0011 19.4 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF88794 - 0.00045 19.9 0.1 0.019 14.9 0.0 2.6 2 0 0 2 2 2 1 EF-hand domain PKD_channel PF08016.12 ORF88794 - 0.00093 18.0 1.6 0.0014 17.4 1.6 1.2 1 0 0 1 1 1 1 Polycystin cation channel EF-hand_5 PF13202.6 ORF88794 - 0.044 13.3 0.0 0.11 12.0 0.0 1.7 1 0 0 1 1 1 0 EF hand MaoC_dehydrat_N PF13452.6 ORF88794 - 0.084 13.0 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 N-terminal half of MaoC dehydratase DUF2975 PF11188.8 ORF88794 - 3.3 7.6 6.8 7 6.5 4.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2975) FGGY_N PF00370.21 ORF79342 - 3.3e-10 40.0 0.0 1.1e-05 25.1 0.0 2.4 2 1 0 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 ORF79342 - 0.00056 19.7 0.0 0.00094 18.9 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain EF1G PF00647.19 ORF75089 - 2.3e-29 101.6 0.1 4.8e-29 100.5 0.1 1.6 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_N PF02798.20 ORF75089 - 1.5e-09 38.0 0.0 3.7e-09 36.8 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF75089 - 1.1e-06 28.7 1.4 2.9e-06 27.4 0.1 2.2 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF75089 - 1.3e-06 28.7 0.0 3e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF75089 - 0.00015 21.7 0.0 0.0003 20.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF75089 - 0.00018 21.6 1.5 0.0003 20.9 0.0 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF75089 - 0.0029 17.4 0.0 0.0054 16.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF75089 - 0.0083 16.4 0.0 0.019 15.2 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF75089 - 0.079 13.7 0.0 0.2 12.4 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain GluRS_N PF18466.1 ORF75089 - 0.14 12.6 0.3 2.5 8.6 0.0 2.9 3 0 0 3 3 3 0 Glutamate--tRNA ligase N-terminal domain RSN1_7TM PF02714.15 ORF74782 - 0.038 13.3 0.1 0.084 12.2 0.0 1.7 2 0 0 2 2 2 0 Calcium-dependent channel, 7TM region, putative phosphate Anoctamin PF04547.12 ORF74782 - 0.08 11.8 1.5 0.14 11.0 0.0 2.0 2 0 0 2 2 2 0 Calcium-activated chloride channel RR_TM4-6 PF06459.12 ORF74782 - 0.45 10.3 15.8 0.7 9.7 15.8 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF3767 PF12597.8 ORF74782 - 0.94 9.3 4.3 1.1 9.1 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) SprA-related PF12118.8 ORF74782 - 4.2 6.4 11.2 5.9 5.9 11.2 1.1 1 0 0 1 1 1 0 SprA-related family Ank_2 PF12796.7 ORF73010 - 1.7e-18 66.9 2.6 1.9e-06 28.4 1.5 4.0 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF73010 - 9.1e-15 54.5 6.0 0.00027 21.2 0.8 5.1 3 1 2 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF73010 - 5.7e-10 38.6 2.9 2.6 8.9 0.0 6.1 6 0 0 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF73010 - 1e-09 38.7 6.0 0.0063 17.1 1.1 5.4 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF73010 - 1.3e-06 28.6 5.6 1.2 9.7 0.6 6.1 5 1 0 5 5 5 1 Ankyrin repeat Globin PF00042.22 ORF5928 - 0.11 13.0 0.5 10 6.7 0.0 3.5 2 1 2 4 4 4 0 Globin FtsQ PF03799.15 ORF5928 - 0.25 12.2 3.1 22 5.9 0.0 3.2 1 1 1 2 2 2 0 Cell division protein FtsQ PKcGMP_CC PF16808.5 ORF5928 - 0.33 10.8 14.7 0.56 10.1 5.7 3.4 2 1 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase HIP1_clath_bdg PF16515.5 ORF5928 - 0.38 11.4 16.1 0.59 10.8 5.1 3.4 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Lebercilin PF15619.6 ORF5928 - 0.4 10.3 22.0 0.28 10.8 19.5 2.1 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease V_ATPase_I PF01496.19 ORF5928 - 3.8 5.3 9.7 0.53 8.1 3.0 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Fib_alpha PF08702.10 ORF5928 - 6.6 6.9 8.7 19 5.4 3.2 3.2 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family TMEM43 PF07787.12 ORF4922 - 7.1e-26 91.1 0.0 1.2e-25 90.3 0.0 1.4 1 1 0 1 1 1 1 Transmembrane protein 43 CrgA PF06781.12 ORF4922 - 0.98 9.5 2.7 2.3 8.3 0.8 2.3 2 0 0 2 2 2 0 Cell division protein CrgA DUF4064 PF13273.6 ORF4922 - 7.3 6.9 7.1 1.6 9.0 0.3 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) FGGY_N PF00370.21 ORF48646 - 3.3e-10 40.0 0.0 1.1e-05 25.1 0.0 2.4 2 1 0 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 ORF48646 - 0.00056 19.7 0.0 0.00094 18.9 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FAST_1 PF06743.15 ORF42280 - 5.1e-10 39.1 2.3 0.17 11.9 0.0 5.8 1 1 6 7 7 7 5 FAST kinase-like protein, subdomain 1 DUF1601 PF07671.11 ORF42280 - 0.42 10.5 9.2 13 5.8 0.1 5.2 6 0 0 6 6 6 0 Protein of unknown function (DUF1601) TspO_MBR PF03073.15 ORF42280 - 6.6 6.8 8.3 5.1 7.2 0.5 3.1 1 1 1 2 2 2 0 TspO/MBR family Kinesin PF00225.23 ORF4192 - 4.4e-55 186.9 0.0 5.7e-55 186.5 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF4192 - 0.034 14.1 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 Microtubule binding LPP PF04728.13 ORF4192 - 0.4 11.1 1.3 0.59 10.6 0.0 1.9 2 0 0 2 2 2 0 Lipoprotein leucine-zipper Sugar_tr PF00083.24 ORF37248 - 1.1e-21 77.2 16.6 1.4e-21 77.0 16.6 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF37248 - 1.7e-16 60.1 30.4 1.7e-16 60.1 30.4 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Cation_ATPase_C PF00689.21 ORF37248 - 0.67 9.6 16.3 0.092 12.5 0.9 3.5 3 1 0 3 3 3 0 Cation transporting ATPase, C-terminus DUF2304 PF10066.9 ORF37248 - 6.7 7.0 8.9 8.4 6.7 3.5 3.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2304) APC_N_CC PF16689.5 ORF34996 - 0.036 14.1 2.8 0.066 13.3 0.7 2.4 2 0 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain Utp12 PF04003.12 ORF34363 - 6.2e-12 45.8 0.0 1e-11 45.1 0.0 1.4 1 0 0 1 1 1 1 Dip2/Utp12 Family EF1G PF00647.19 ORF3193 - 2.3e-29 101.6 0.1 4.8e-29 100.5 0.1 1.6 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_N PF02798.20 ORF3193 - 1.6e-09 38.0 0.0 3.7e-09 36.8 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF3193 - 1.3e-06 28.7 0.0 3e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF3193 - 1.5e-06 28.3 0.4 8.6e-06 25.9 0.0 2.3 2 1 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF3193 - 0.00015 21.7 0.0 0.00035 20.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF3193 - 0.0002 21.5 1.1 0.00044 20.4 0.0 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF3193 - 0.0044 16.8 0.0 0.0081 15.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF3193 - 0.0088 16.3 0.0 0.019 15.2 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF3193 - 0.074 13.8 0.0 0.19 12.5 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain GluRS_N PF18466.1 ORF3193 - 0.14 12.6 0.3 2.5 8.6 0.0 2.9 3 0 0 3 3 3 0 Glutamate--tRNA ligase N-terminal domain VSP PF03302.13 ORF30818 - 0.00037 19.5 13.5 0.00037 19.5 13.5 5.4 1 1 2 3 3 3 1 Giardia variant-specific surface protein DUF445 PF04286.12 ORF2733 - 0.035 13.9 11.0 0.058 13.2 11.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF445) DUF16 PF01519.16 ORF2733 - 0.15 12.6 11.3 0.084 13.4 0.9 3.5 3 2 0 3 3 3 0 Protein of unknown function DUF16 DUF3150 PF11348.8 ORF2733 - 0.23 10.6 5.8 0.063 12.5 2.5 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3150) SbsC_C PF18058.1 ORF2733 - 1.1 9.5 10.3 0.17 12.1 1.3 3.2 2 1 1 3 3 3 0 SbsC C-terminal domain GIT1_C PF12205.8 ORF2733 - 3.8 7.7 6.6 24 5.1 0.4 2.9 2 1 1 3 3 3 0 G protein-coupled receptor kinase-interacting protein 1 C term ABC_tran PF00005.27 ORF25026 - 4.1e-31 108.3 0.2 7.6e-31 107.5 0.2 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF25026 - 1.4e-05 24.6 4.3 3.3e-05 23.4 0.5 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain ABC_membrane PF00664.23 ORF25026 - 3.6e-05 23.5 0.5 5e-05 23.1 0.5 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_24 PF13479.6 ORF25026 - 0.0049 16.6 0.1 0.008 15.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 ORF25026 - 0.029 14.5 0.2 0.08 13.0 0.0 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase DDRGK PF09756.9 ORF25026 - 0.052 13.1 0.5 0.084 12.5 0.5 1.3 1 0 0 1 1 1 0 DDRGK domain DUF87 PF01935.17 ORF25026 - 0.064 13.3 1.1 0.13 12.4 0.9 1.6 1 1 0 1 1 1 0 Helicase HerA, central domain AAA_29 PF13555.6 ORF25026 - 0.083 12.6 0.2 0.2 11.4 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NB-ARC PF00931.22 ORF25026 - 0.099 11.8 1.0 2.6 7.1 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain ATP-synt_ab PF00006.25 ORF25026 - 0.11 12.2 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain FKBP_N_2 PF18023.1 ORF25026 - 0.12 12.5 2.0 0.13 12.4 0.9 1.7 2 0 0 2 2 2 0 BDBT FKBP like N-terminal CbiA PF01656.23 ORF25026 - 0.12 12.4 0.3 0.24 11.4 0.1 1.7 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF547 PF04784.14 ORF23246 - 4e-17 62.4 0.0 2e-16 60.2 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function, DUF547 Metal_resist PF13801.6 ORF23246 - 0.036 14.3 0.4 16 5.7 0.0 2.9 2 0 0 2 2 2 0 Heavy-metal resistance Glycos_transf_3 PF00591.21 ORF19064 - 2.6e-53 181.2 1.1 4.1e-53 180.6 1.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain PYNP_C PF07831.13 ORF19064 - 3.5e-26 90.7 0.3 6.8e-26 89.7 0.3 1.5 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain CAP PF00188.26 ORF10377 - 0.012 16.4 0.0 0.14 13.0 0.0 2.4 1 1 0 1 1 1 0 Cysteine-rich secretory protein family Use1 PF09753.9 ORF10377 - 1.7 8.3 7.8 0.89 9.2 2.1 2.1 2 0 0 2 2 2 0 Membrane fusion protein Use1 Ino80_Iec3 PF14612.6 ORF10377 - 2.1 8.9 8.7 0.21 12.2 0.3 2.3 2 1 1 3 3 3 0 IEC3 subunit of the Ino80 complex, chromatin re-modelling PIH1 PF08190.12 ORF103351 - 2.5e-35 121.4 2.3 4.5e-35 120.6 2.3 1.5 1 0 0 1 1 1 1 PIH1 N-terminal domain RMI1_N PF08585.12 ORF102513 - 3.1e-07 30.4 3.2 3.1e-07 30.4 3.2 1.6 2 0 0 2 2 2 1 RecQ mediated genome instability protein Tenui_NCP PF04876.12 ORF102513 - 0.28 10.8 3.2 0.18 11.4 0.5 2.0 2 0 0 2 2 2 0 Tenuivirus major non-capsid protein CPSase_L_D3 PF02787.19 ORF102513 - 0.43 10.9 5.6 0.13 12.6 1.4 2.5 2 1 0 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DUF5365 PF17326.2 ORF102513 - 1.2 9.5 15.0 0.58 10.6 0.7 3.2 3 1 0 3 3 3 0 Family of unknown function (DUF5365) TRAF_BIRC3_bd PF16673.5 NODE_13989_length_1187_cov_235.900174_g10491_i0forward_frame_1 - 0.00089 19.0 2.0 0.00089 19.0 2.0 5.9 4 3 2 6 6 6 1 TNF receptor-associated factor BIRC3 binding domain Med9 PF07544.13 NODE_13989_length_1187_cov_235.900174_g10491_i0forward_frame_1 - 0.0054 16.8 8.6 0.0054 16.8 8.6 5.5 2 2 2 4 4 4 1 RNA polymerase II transcription mediator complex subunit 9 DUF3584 PF12128.8 NODE_13989_length_1187_cov_235.900174_g10491_i0forward_frame_1 - 0.19 9.2 63.8 0.26 8.8 63.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) MscS_porin PF12795.7 NODE_13989_length_1187_cov_235.900174_g10491_i0forward_frame_1 - 0.35 10.4 60.0 0.37 10.3 29.2 2.8 2 1 0 2 2 2 0 Mechanosensitive ion channel porin domain Fez1 PF06818.15 NODE_13989_length_1187_cov_235.900174_g10491_i0forward_frame_1 - 2.1 8.8 76.7 6.7 7.1 29.2 3.3 1 1 2 3 3 3 0 Fez1 FPP PF05911.11 NODE_13989_length_1187_cov_235.900174_g10491_i0forward_frame_1 - 5.7 5.0 78.1 0.73 7.9 48.8 2.0 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil KASH_CCD PF14662.6 NODE_13989_length_1187_cov_235.900174_g10491_i0forward_frame_1 - 9.9 5.9 82.9 25 4.6 35.3 3.8 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH C2 PF00168.30 ORF90710 - 2.3e-15 56.7 0.0 1.3e-11 44.6 0.0 2.4 2 0 0 2 2 2 2 C2 domain Prefoldin PF02996.17 ORF90710 - 0.35 10.8 4.1 0.56 10.1 4.1 1.2 1 0 0 1 1 1 0 Prefoldin subunit DUF445 PF04286.12 ORF83811 - 4.1e-10 40.0 0.0 0.0035 17.2 0.0 3.4 2 1 1 3 3 3 3 Protein of unknown function (DUF445) GAS2 PF02187.17 ORF82443 - 2.6e-07 30.6 0.2 7.3e-07 29.2 0.2 1.8 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain GAS PF13851.6 ORF82443 - 0.00079 18.8 16.0 0.00079 18.8 16.0 2.3 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3916 PF13079.6 ORF82443 - 0.0023 17.8 0.1 0.0069 16.3 0.1 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF3916) Seryl_tRNA_N PF02403.22 ORF82443 - 0.0043 17.3 4.8 0.0043 17.3 4.8 3.1 1 1 2 3 3 3 1 Seryl-tRNA synthetase N-terminal domain Mod_r PF07200.13 ORF82443 - 0.0047 17.0 3.3 0.0047 17.0 3.3 3.4 1 1 2 3 3 3 1 Modifier of rudimentary (Mod(r)) protein Laminin_II PF06009.12 ORF82443 - 0.013 15.5 7.4 0.024 14.7 2.5 2.8 2 1 0 2 2 2 0 Laminin Domain II Lysine_decarbox PF03641.14 ORF82443 - 0.024 14.7 1.3 1.9 8.6 0.1 2.5 2 0 0 2 2 2 0 Possible lysine decarboxylase XhlA PF10779.9 ORF82443 - 0.03 14.5 1.0 0.03 14.5 1.0 4.1 5 0 0 5 5 4 0 Haemolysin XhlA Gon7 PF08738.10 ORF82443 - 0.06 13.4 1.4 0.11 12.6 0.1 2.1 2 0 0 2 2 2 0 Gon7 family Med30 PF11315.8 ORF82443 - 0.087 13.0 8.9 0.037 14.2 3.9 2.9 1 1 0 2 2 2 0 Mediator complex subunit 30 DegS PF05384.11 ORF82443 - 0.1 12.1 15.6 0.05 13.1 8.0 3.0 1 1 2 3 3 3 0 Sensor protein DegS TfoX_N PF04993.13 ORF82443 - 0.12 12.7 0.3 0.28 11.4 0.3 1.7 1 0 0 1 1 1 0 TfoX N-terminal domain DUF5344 PF17279.2 ORF82443 - 0.25 12.0 8.8 1.7 9.3 0.2 3.7 2 1 0 3 3 3 0 Family of unknown function (DUF5344) DUF948 PF06103.11 ORF82443 - 0.25 11.6 4.1 2.3 8.6 1.0 3.3 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) COG2 PF06148.11 ORF82443 - 0.31 11.1 10.0 1.6 8.8 0.9 2.6 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 CorA PF01544.18 ORF82443 - 0.34 10.2 8.5 0.19 11.0 6.2 1.7 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein Sec34 PF04136.15 ORF82443 - 0.71 9.7 10.6 0.88 9.4 1.7 3.2 1 1 1 3 3 3 0 Sec34-like family V_ATPase_I PF01496.19 ORF82443 - 1 7.2 10.5 0.74 7.7 9.0 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Baculo_PEP_C PF04513.12 ORF82443 - 1.2 9.1 6.2 2.3 8.2 0.3 2.8 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus PCRF PF03462.18 ORF82443 - 2.6 7.9 19.1 0.71 9.7 4.7 3.3 1 1 2 3 3 3 0 PCRF domain FliT PF05400.13 ORF82443 - 2.6 8.9 18.3 1 10.2 4.4 3.5 2 1 1 3 3 3 0 Flagellar protein FliT DASH_Dam1 PF08653.10 ORF82443 - 2.8 7.8 4.0 26 4.7 0.1 3.2 3 0 0 3 3 3 0 DASH complex subunit Dam1 YabA PF06156.13 ORF82443 - 3.7 8.2 19.5 0.25 12.0 3.3 3.7 2 1 2 4 4 3 0 Initiation control protein YabA DUF1664 PF07889.12 ORF82443 - 4.2 7.4 9.4 0.79 9.8 1.2 2.8 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) GrpE PF01025.19 ORF82443 - 6.4 6.4 22.7 3.5 7.3 11.9 3.0 2 1 1 3 3 3 0 GrpE DUF4404 PF14357.6 ORF82443 - 9.1 7.0 16.4 0.25 12.0 1.0 3.6 3 1 1 4 4 3 0 Domain of unknown function (DUF4404) TPR_12 PF13424.6 ORF81494 - 0.0022 18.2 9.4 0.006 16.8 1.8 4.3 5 1 1 6 6 6 2 Tetratricopeptide repeat HGD-D PF06050.13 ORF81494 - 0.033 13.9 0.5 0.089 12.5 0.3 1.5 1 1 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component TPR_1 PF00515.28 ORF81494 - 0.1 12.5 1.0 1.6 8.7 0.9 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF81494 - 0.17 12.1 8.1 1.3 9.5 1.4 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF81494 - 0.24 11.5 1.9 2.4 8.4 0.8 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat PEP-utilisers_N PF05524.13 ORF81494 - 3.4 7.9 8.1 0.47 10.6 1.1 2.8 2 1 0 2 2 2 0 PEP-utilising enzyme, N-terminal TPR_2 PF07719.17 ORF81494 - 5.8 7.3 15.3 0.52 10.6 3.0 4.9 6 0 0 6 6 6 0 Tetratricopeptide repeat NIF PF03031.18 ORF66866 - 1.6e-41 141.6 1.9 2.9e-41 140.8 1.9 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF2968 PF11180.8 ORF667 - 0.002 17.8 0.5 0.002 17.8 0.5 5.5 2 2 4 6 6 6 1 Protein of unknown function (DUF2968) ATG16 PF08614.11 ORF667 - 0.015 15.6 81.8 0.051 13.8 6.0 5.1 1 1 4 5 5 5 0 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 ORF667 - 0.023 14.7 3.5 0.023 14.7 3.5 8.3 2 2 6 8 8 8 0 TATA element modulatory factor 1 DNA binding APG6_N PF17675.1 ORF667 - 0.026 15.0 100.2 0.062 13.8 13.9 5.6 1 1 4 5 5 5 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF667 - 0.25 10.2 93.9 0.12 11.2 24.4 3.6 1 1 3 4 4 4 0 Spc7 kinetochore protein TolA_bind_tri PF16331.5 ORF667 - 0.39 10.8 47.0 0.07 13.2 3.0 6.1 3 3 2 5 5 5 0 TolA binding protein trimerisation Fe-S_assembly PF04384.13 ORF667 - 1.7 9.3 10.3 7.1 7.3 0.8 3.7 3 1 0 3 3 3 0 Iron-sulphur cluster assembly TPR_MLP1_2 PF07926.12 ORF667 - 1.9 8.6 88.1 0.03 14.4 11.5 5.4 2 2 2 4 4 4 0 TPR/MLP1/MLP2-like protein NIF PF03031.18 ORF62298 - 1.6e-41 141.6 1.9 2.9e-41 140.8 1.9 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Ribosomal_S24e PF01282.19 ORF60462 - 0.093 12.7 0.1 0.25 11.3 0.1 1.7 1 0 0 1 1 1 0 Ribosomal protein S24e DUF1439 PF07273.12 ORF60077 - 0.058 13.2 0.4 6.8 6.5 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1439) DUF2968 PF11180.8 ORF53225 - 0.002 17.8 0.5 0.002 17.8 0.5 5.5 2 2 4 6 6 6 1 Protein of unknown function (DUF2968) ATG16 PF08614.11 ORF53225 - 0.015 15.6 81.8 0.051 13.8 6.0 5.1 1 1 4 5 5 5 0 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 ORF53225 - 0.023 14.7 3.5 0.023 14.7 3.5 8.3 2 2 6 8 8 8 0 TATA element modulatory factor 1 DNA binding APG6_N PF17675.1 ORF53225 - 0.026 15.0 100.2 0.062 13.8 13.9 5.6 1 1 4 5 5 5 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF53225 - 0.25 10.2 93.9 0.12 11.2 24.4 3.6 1 1 3 4 4 4 0 Spc7 kinetochore protein TolA_bind_tri PF16331.5 ORF53225 - 0.39 10.8 47.0 0.07 13.2 3.0 6.1 3 3 2 5 5 5 0 TolA binding protein trimerisation Fe-S_assembly PF04384.13 ORF53225 - 1.7 9.3 10.3 7.1 7.3 0.8 3.7 3 1 0 3 3 3 0 Iron-sulphur cluster assembly TPR_MLP1_2 PF07926.12 ORF53225 - 1.9 8.6 88.1 0.03 14.4 11.5 5.4 2 2 2 4 4 4 0 TPR/MLP1/MLP2-like protein OTCace PF00185.24 ORF48683 - 4.2e-41 140.6 0.0 6.9e-41 139.9 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 ORF48683 - 2.6e-25 89.2 0.0 6.6e-25 87.9 0.0 1.7 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FMN_dh PF01070.18 ORF46884 - 2.4e-125 418.2 0.0 2.9e-125 417.9 0.0 1.1 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 ORF46884 - 3.1e-06 26.4 3.7 2e-05 23.8 1.2 2.3 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 ORF46884 - 3.1e-05 23.5 3.4 4.7e-05 22.9 3.4 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase Glu_synthase PF01645.17 ORF46884 - 0.00086 18.5 0.7 0.0014 17.9 0.7 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase IGPS PF00218.21 ORF46884 - 0.0031 16.7 0.0 0.011 15.0 0.0 1.9 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase ThiG PF05690.14 ORF46884 - 0.0055 16.0 0.8 0.58 9.4 0.7 2.2 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 ORF46884 - 0.088 12.3 0.2 0.62 9.5 0.1 2.0 1 1 1 2 2 2 0 Histidine biosynthesis protein DHO_dh PF01180.21 ORF46884 - 0.13 11.4 0.2 0.21 10.8 0.2 1.3 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase DUF1712 PF08217.11 ORF44729 - 2.5e-12 46.1 0.1 1.6e-10 40.1 0.2 2.9 2 1 0 2 2 2 2 Fungal domain of unknown function (DUF1712) Aldo_ket_red PF00248.21 ORF4400 - 2.9e-41 141.6 0.0 1.8e-39 135.7 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Ion_trans PF00520.31 ORF35830 - 3e-17 62.7 9.6 3.9e-17 62.3 9.6 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF35830 - 2.8e-11 42.4 0.0 2.1e-05 24.1 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF35830 - 5e-11 41.3 0.2 1.7e-05 24.0 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF35830 - 2.2e-07 31.2 0.1 4.3e-07 30.3 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF35830 - 1.7e-06 27.2 0.2 0.0066 15.9 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF35830 - 0.005 16.8 0.4 1 9.4 0.1 2.4 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand DUF1073 PF06381.11 ORF35830 - 0.11 11.3 0.8 0.63 8.8 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1073) DUF5090 PF17009.5 ORF35830 - 2.2 8.2 8.2 2.6 7.9 3.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5090) PKD_channel PF08016.12 ORF35830 - 2.9 6.5 9.8 33 3.0 9.8 2.0 1 1 0 1 1 1 0 Polycystin cation channel FAIM1 PF06905.13 ORF30007 - 0.024 14.4 0.1 0.039 13.6 0.1 1.3 1 0 0 1 1 1 0 Fas apoptotic inhibitory molecule (FAIM1) HA2 PF04408.23 ORF2793 - 5.7e-24 84.5 0.0 1.7e-23 83.0 0.0 1.8 2 0 0 2 2 2 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 ORF2793 - 2.9e-05 24.4 0.0 5.3e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold PP2C PF00481.21 ORF27220 - 5.1e-37 127.9 0.0 7.2e-37 127.4 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF27220 - 1e-05 25.5 0.0 0.1 12.5 0.0 2.2 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) NFACT-C PF11923.8 ORF22710 - 7e-19 67.7 0.1 7e-19 67.7 0.1 3.2 3 2 0 3 3 3 1 NFACT protein C-terminal domain Ribosomal_L34e PF01199.18 ORF22710 - 0.093 13.0 0.7 0.093 13.0 0.7 2.6 3 1 1 4 4 4 0 Ribosomal protein L34e SWIB PF02201.18 ORF22692 - 5.4e-14 51.8 0.5 5.4e-14 51.8 0.5 2.4 2 0 0 2 2 2 1 SWIB/MDM2 domain Asp_Arg_Hydrox PF05118.15 ORF1599 - 3.1e-14 53.1 0.0 5.8e-14 52.2 0.0 1.4 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase TPR_2 PF07719.17 ORF1599 - 0.013 15.6 0.5 0.038 14.1 0.5 1.9 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF1599 - 0.036 14.6 1.5 0.081 13.5 0.5 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Cupin_2 PF07883.11 ORF1599 - 0.042 13.6 0.0 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 Cupin domain TPR_12 PF13424.6 ORF1599 - 0.055 13.8 0.4 0.14 12.5 0.4 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat CDO_I PF05995.12 ORF1599 - 0.057 12.7 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Cysteine dioxygenase type I TPR_14 PF13428.6 ORF1599 - 0.11 13.3 4.2 0.44 11.5 1.8 3.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF1599 - 0.48 11.1 3.9 0.72 10.5 1.9 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Pox_L5 PF04872.13 ORF112275 - 0.042 13.7 0.3 1.1 9.2 0.0 2.8 2 0 0 2 2 2 0 Poxvirus L5 protein family TPR_12 PF13424.6 ORF107388 - 0.0022 18.2 9.4 0.006 16.8 1.8 4.3 5 1 1 6 6 6 2 Tetratricopeptide repeat HGD-D PF06050.13 ORF107388 - 0.033 13.9 0.5 0.089 12.5 0.3 1.5 1 1 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component TPR_1 PF00515.28 ORF107388 - 0.1 12.5 1.0 1.6 8.7 0.9 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF107388 - 0.17 12.1 8.1 1.3 9.5 1.4 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF107388 - 0.24 11.5 1.9 2.4 8.4 0.8 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat PEP-utilisers_N PF05524.13 ORF107388 - 3.4 7.9 8.1 0.47 10.6 1.1 2.8 2 1 0 2 2 2 0 PEP-utilising enzyme, N-terminal TPR_2 PF07719.17 ORF107388 - 5.8 7.3 15.3 0.52 10.6 3.0 4.9 6 0 0 6 6 6 0 Tetratricopeptide repeat Pkinase PF00069.25 ORF105418 - 8.6e-77 258.1 0.2 1.5e-76 257.2 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105418 - 1.3e-47 162.3 0.0 2.2e-47 161.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF105418 - 4.5e-09 36.8 0.9 1.2e-08 35.4 0.9 1.7 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF105418 - 2.8e-07 30.1 0.0 5e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF105418 - 0.00066 19.1 0.0 0.013 14.8 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF105418 - 0.011 14.5 0.0 0.024 13.4 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF105418 - 0.22 11.4 0.0 0.53 10.2 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family Gln-synt_C PF00120.24 ORF103225 - 1.3e-20 73.7 0.0 5.4e-17 61.8 0.0 2.1 2 0 0 2 2 2 2 Glutamine synthetase, catalytic domain DUF4462 PF14692.6 ORF103225 - 0.095 12.2 0.1 0.095 12.2 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4462) DUF2703 PF10865.8 NODE_14076_length_1184_cov_117.721497_g10562_i0forward_frame_1 - 0.067 13.4 1.0 0.11 12.7 1.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) Collectrin PF16959.5 NODE_14076_length_1184_cov_117.721497_g10562_i0forward_frame_1 - 1 9.1 5.7 3.3 7.5 3.5 2.6 2 1 0 2 2 2 0 Renal amino acid transporter ESM4 PF15952.5 NODE_14001_length_1187_cov_85.394965_g10502_i0reverse_frame_2 - 0.72 10.3 19.9 1.6 9.1 19.9 1.7 1 0 0 1 1 1 0 Enhancer of split M4 family V_ATPase_I PF01496.19 NODE_14001_length_1187_cov_85.394965_g10502_i0reverse_frame_2 - 0.91 7.4 12.8 1.1 7.0 12.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Zip PF02535.22 NODE_14001_length_1187_cov_85.394965_g10502_i0reverse_frame_2 - 1.2 8.3 8.8 1.5 8.0 8.8 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter SLC12 PF03522.15 NODE_14001_length_1187_cov_85.394965_g10502_i0reverse_frame_2 - 1.2 8.1 19.7 1.7 7.6 19.7 1.2 1 0 0 1 1 1 0 Solute carrier family 12 Presenilin PF01080.17 NODE_14001_length_1187_cov_85.394965_g10502_i0reverse_frame_2 - 1.3 7.7 19.1 1.8 7.3 19.1 1.1 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 NODE_14001_length_1187_cov_85.394965_g10502_i0reverse_frame_2 - 4.9 5.3 22.4 6.3 5.0 22.4 1.1 1 0 0 1 1 1 0 CDC45-like protein Allexi_40kDa PF05549.11 NODE_14001_length_1187_cov_85.394965_g10502_i0reverse_frame_2 - 6.6 6.2 13.8 6.2 6.3 12.1 1.7 2 0 0 2 2 2 0 Allexivirus 40kDa protein YebO PF13974.6 NODE_14001_length_1187_cov_85.394965_g10502_i0forward_frame_3 - 0.036 14.1 1.7 0.1 12.7 1.7 1.7 1 0 0 1 1 1 0 YebO-like protein Golgin_A5 PF09787.9 ORF97042 - 0.0045 16.5 30.9 0.0067 15.9 30.9 1.3 1 0 0 1 1 1 1 Golgin subfamily A member 5 ATG16 PF08614.11 ORF97042 - 2 8.6 31.1 4.3 7.5 11.3 3.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Acyl-CoA_dh_1 PF00441.24 ORF95466 - 2.9e-38 131.4 1.6 4e-38 131.0 1.6 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF95466 - 7.2e-22 77.4 0.0 1.7e-21 76.2 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 ORF95466 - 2e-08 34.6 0.0 3.4e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 ORF95466 - 0.0051 17.5 0.0 0.014 16.1 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain ApoLp-III PF07464.11 ORF92951 - 0.0092 16.1 8.2 0.5 10.4 1.0 2.7 2 0 0 2 2 2 2 Apolipophorin-III precursor (apoLp-III) LURAP PF14854.6 ORF92951 - 0.033 14.1 3.7 2 8.4 0.1 2.5 2 0 0 2 2 2 0 Leucine rich adaptor protein CorA PF01544.18 ORF92951 - 0.11 11.8 14.4 1.1 8.5 7.0 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF948 PF06103.11 ORF92951 - 0.31 11.3 5.8 0.61 10.4 0.1 3.3 3 1 2 5 5 5 0 Bacterial protein of unknown function (DUF948) Tweety PF04906.13 ORF92951 - 0.38 9.4 4.8 2.2 6.8 0.2 2.5 2 1 0 2 2 2 0 Tweety TPR_18 PF13512.6 ORF92951 - 0.41 10.8 3.8 0.2 11.7 0.9 1.9 2 1 0 2 2 2 0 Tetratricopeptide repeat TMF_DNA_bd PF12329.8 ORF92951 - 0.62 10.1 7.6 0.79 9.8 0.2 4.0 4 1 0 4 4 3 0 TATA element modulatory factor 1 DNA binding Sec8_exocyst PF04048.14 ORF92951 - 0.92 9.4 13.2 5.5 6.9 1.7 3.7 3 1 1 4 4 4 0 Sec8 exocyst complex component specific domain Baculo_PEP_C PF04513.12 ORF92951 - 1.1 9.3 7.5 4.5 7.3 0.2 3.7 2 2 3 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 ORF92951 - 1.8 8.6 19.7 3.3 7.8 0.3 4.6 2 2 4 6 6 6 0 Protein of unknown function (DUF1664) Phage_GPO PF05929.11 ORF92951 - 2.6 7.6 27.9 2.8 7.5 4.3 3.2 2 1 1 3 3 3 0 Phage capsid scaffolding protein (GPO) serine peptidase FAM76 PF16046.5 ORF92951 - 2.7 7.2 15.8 0.33 10.3 7.5 2.2 1 1 0 2 2 2 0 FAM76 protein OmpH PF03938.14 ORF92951 - 3.3 8.1 17.7 0.45 10.9 4.0 2.9 2 2 0 2 2 2 0 Outer membrane protein (OmpH-like) LXG PF04740.12 ORF92951 - 4.4 7.0 15.4 0.25 11.0 5.0 3.0 2 1 1 3 3 3 0 LXG domain of WXG superfamily DUF4600 PF15372.6 ORF92951 - 5.5 7.4 15.2 0.17 12.3 3.6 3.4 2 2 2 4 4 4 0 Domain of unknown function (DUF4600) Ion_trans PF00520.31 ORF92928 - 7.5e-21 74.5 24.0 9.6e-21 74.1 24.0 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF92928 - 0.024 14.6 0.4 0.068 13.1 0.4 1.8 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 ORF92928 - 0.089 13.3 0.0 0.2 12.1 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair LETM1 PF07766.13 ORF92577 - 2.7e-13 49.9 0.4 2.7e-13 49.9 0.4 2.0 2 0 0 2 2 2 1 LETM1-like protein Methyltransf_2 PF00891.18 ORF88412 - 5.2e-15 55.3 0.0 7.1e-15 54.9 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Dimerisation2 PF16864.5 ORF88412 - 1.7e-13 50.4 0.2 2.9e-13 49.6 0.2 1.4 1 0 0 1 1 1 1 Dimerisation domain Methyltransf_12 PF08242.12 ORF88412 - 7e-07 29.9 0.0 1.2e-06 29.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF88412 - 2.3e-06 27.5 0.0 3.6e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF88412 - 6.6e-06 26.7 0.0 1.3e-05 25.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF88412 - 0.00014 22.4 0.0 0.00027 21.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF88412 - 0.0033 17.2 0.0 0.019 14.7 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF88412 - 0.0098 15.3 0.0 0.016 14.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family He_PIG PF05345.12 ORF85707 - 0.00074 19.7 2.4 0.0025 18.0 1.5 2.3 2 0 0 2 2 2 1 Putative Ig domain fn3_3 PF14686.6 ORF85707 - 0.029 14.1 1.4 0.096 12.5 1.4 1.9 1 0 0 1 1 1 0 Polysaccharide lyase family 4, domain II NTP_transf_2 PF01909.23 ORF84642 - 0.0024 18.1 0.0 0.0046 17.2 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF1657 PF07870.11 ORF84642 - 6.7 6.7 5.8 23 5.0 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1657) PSII PF00421.19 ORF83835 - 6.9e-121 404.4 4.3 7.8e-121 404.2 4.3 1.0 1 0 0 1 1 1 1 Photosystem II protein Lustrin_cystein PF14625.6 ORF82899 - 0.036 14.4 3.2 0.18 12.2 3.2 2.2 1 0 0 1 1 1 0 Lustrin, cysteine-rich repeated domain TMEM154 PF15102.6 ORF82899 - 0.049 13.5 0.4 0.15 11.9 0.0 2.0 2 0 0 2 2 2 0 TMEM154 protein family SKG6 PF08693.10 ORF82899 - 0.086 12.3 0.3 0.2 11.1 0.3 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Syndecan PF01034.20 ORF82899 - 0.21 11.5 0.9 0.58 10.1 0.9 1.8 1 0 0 1 1 1 0 Syndecan domain Trypan_PARP PF05887.11 ORF82899 - 0.25 11.3 6.3 0.069 13.1 0.6 2.3 2 0 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) Adeno_E3_CR2 PF02439.15 ORF82899 - 1.6 8.5 10.5 4.5 7.1 10.5 1.7 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 CAP_N PF01213.19 ORF82899 - 1.8 8.0 6.2 2.9 7.3 6.2 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Pkinase PF00069.25 ORF81759 - 2.3e-40 138.7 0.0 3.4e-40 138.1 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF81759 - 1.1e-31 110.0 0.0 1.7e-31 109.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF81759 - 5.1e-07 29.3 0.0 1.6e-06 27.7 0.0 1.8 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF81759 - 0.00087 18.2 0.0 0.0056 15.5 0.0 1.9 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF81759 - 0.08 12.3 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DcuA_DcuB PF03605.14 ORF8093 - 7.6e-127 423.2 13.9 8.9e-127 423.0 13.9 1.0 1 0 0 1 1 1 1 Anaerobic c4-dicarboxylate membrane transporter CitMHS PF03600.16 ORF8093 - 0.032 13.4 23.4 0.06 12.5 23.4 1.5 1 1 0 1 1 1 0 Citrate transporter MFS_1 PF07690.16 ORF73109 - 8e-23 80.9 29.8 8e-23 80.9 29.8 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF73109 - 1.1e-19 70.6 24.5 1.2e-16 60.6 4.4 2.2 1 1 0 2 2 2 2 Sugar (and other) transporter DUF3767 PF12597.8 ORF73109 - 0.019 14.7 1.4 0.49 10.2 1.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) DUF4131 PF13567.6 ORF66808 - 0.43 10.2 2.4 5.5 6.6 3.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DUF2569 PF10754.9 ORF66808 - 3.9 7.9 9.8 2 8.9 2.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2569) Helicase_C PF00271.31 ORF6068 - 8.1e-30 103.4 0.2 1.8e-29 102.3 0.1 1.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DbpA PF03880.15 ORF6068 - 6.6e-21 74.1 0.0 1.5e-20 72.9 0.0 1.7 1 0 0 1 1 1 1 DbpA RNA binding domain DEADboxA PF12343.8 ORF6068 - 2.3e-14 53.6 43.4 2.3e-14 53.6 43.4 2.6 2 0 0 2 2 2 1 Cold shock protein DEAD box A Acyl-CoA_dh_1 PF00441.24 ORF5403 - 2.9e-38 131.4 1.6 4e-38 131.0 1.6 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF5403 - 7.2e-22 77.4 0.0 1.7e-21 76.2 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 ORF5403 - 2e-08 34.6 0.0 3.4e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 ORF5403 - 0.0051 17.5 0.0 0.014 16.1 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain His_Phos_2 PF00328.22 ORF51676 - 3.1e-08 33.4 2.6 8.6e-06 25.3 2.6 2.1 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) MFS_1 PF07690.16 ORF40262 - 8e-23 80.9 29.8 8e-23 80.9 29.8 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF40262 - 1.1e-19 70.6 24.5 1.2e-16 60.6 4.4 2.2 1 1 0 2 2 2 2 Sugar (and other) transporter DUF3767 PF12597.8 ORF40262 - 0.019 14.7 1.4 0.49 10.2 1.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) LETM1 PF07766.13 ORF31936 - 2.7e-13 49.9 0.4 2.7e-13 49.9 0.4 2.0 2 0 0 2 2 2 1 LETM1-like protein NYD-SP28_assoc PF14775.6 ORF3061 - 6.6e-07 29.3 0.4 6.6e-07 29.3 0.4 4.3 5 0 0 5 5 5 2 Sperm tail C-terminal domain Ribosomal_S10 PF00338.22 ORF3061 - 0.0094 16.2 1.0 0.13 12.6 1.1 2.5 2 0 0 2 2 2 1 Ribosomal protein S10p/S20e PKK PF12474.8 ORF3061 - 0.047 13.8 0.6 0.047 13.8 0.6 5.2 2 1 4 6 6 6 0 Polo kinase kinase DUF1640 PF07798.11 ORF3061 - 0.054 13.5 34.0 0.022 14.8 8.3 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1640) Baculo_PEP_C PF04513.12 ORF3061 - 0.45 10.6 5.3 2.5 8.1 0.2 3.4 1 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus HrpB2 PF09487.10 ORF3061 - 0.91 10.0 3.4 0.52 10.7 0.6 2.0 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB2) OSTMP1 PF09777.9 ORF3061 - 1.1 8.6 8.7 0.44 9.9 6.2 1.6 2 0 0 2 2 2 0 Osteopetrosis-associated transmembrane protein 1 precursor DUF3970 PF13113.6 ORF3061 - 1.7 8.9 8.8 0.24 11.7 0.3 3.7 2 2 2 4 4 4 0 Protein of unknown function (DUF3970) PspB PF06667.12 ORF3061 - 2 8.5 5.2 0.99 9.5 0.4 2.9 2 1 0 2 2 2 0 Phage shock protein B Dala_Dala_lig_N PF01820.21 ORF29682 - 0.06 13.8 0.1 0.3 11.5 0.0 2.2 2 0 0 2 2 2 0 D-ala D-ala ligase N-terminus Lustrin_cystein PF14625.6 ORF29311 - 0.037 14.4 3.2 0.18 12.2 3.2 2.2 1 0 0 1 1 1 0 Lustrin, cysteine-rich repeated domain SKG6 PF08693.10 ORF29311 - 0.088 12.2 0.3 0.2 11.1 0.3 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain TMEM154 PF15102.6 ORF29311 - 0.11 12.3 2.0 0.15 11.9 0.0 2.2 3 0 0 3 3 3 0 TMEM154 protein family Syndecan PF01034.20 ORF29311 - 0.21 11.5 0.9 0.58 10.1 0.9 1.8 1 0 0 1 1 1 0 Syndecan domain Adeno_E3_CR2 PF02439.15 ORF29311 - 1.6 8.5 10.5 4.5 7.1 10.5 1.7 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 CAP_N PF01213.19 ORF29311 - 1.8 8.0 6.2 2.9 7.3 6.2 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Trypan_PARP PF05887.11 ORF29311 - 9 6.3 11.4 0.069 13.1 0.6 2.3 2 1 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) Pkinase PF00069.25 ORF29291 - 4.4e-36 124.6 0.0 8.3e-36 123.7 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29291 - 3.9e-20 72.2 0.0 7.4e-20 71.3 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase WW PF00397.26 ORF29291 - 2.2e-06 27.7 2.8 4.3e-06 26.7 2.8 1.5 1 0 0 1 1 1 1 WW domain Kinase-like PF14531.6 ORF29291 - 0.0044 16.4 0.0 0.0071 15.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF29291 - 0.0071 15.7 0.1 0.0071 15.7 0.1 1.5 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF29291 - 0.0074 15.3 0.0 0.013 14.5 0.0 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF29291 - 0.015 14.1 0.0 0.015 14.1 0.0 1.9 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF29291 - 0.022 14.7 0.2 0.057 13.3 0.0 1.7 2 0 0 2 2 2 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF29291 - 0.032 13.8 0.4 0.11 12.1 0.0 1.8 2 0 0 2 2 2 0 RIO1 family Pkinase PF00069.25 ORF2911 - 2.3e-40 138.7 0.0 3.4e-40 138.1 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF2911 - 1.1e-31 110.0 0.0 1.7e-31 109.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF2911 - 5.1e-07 29.3 0.0 1.6e-06 27.7 0.0 1.8 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF2911 - 0.00087 18.2 0.0 0.0056 15.5 0.0 1.9 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF2911 - 0.08 12.3 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Thioredoxin PF00085.20 ORF28861 - 3.5e-08 33.4 0.0 9.1e-08 32.0 0.0 1.7 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_6 PF13848.6 ORF28861 - 3.8e-07 30.2 0.0 0.017 15.1 0.0 3.2 2 1 1 3 3 3 3 Thioredoxin-like domain BCDHK_Adom3 PF10436.9 ORF28393 - 1.3e-26 93.4 1.5 2.7e-26 92.4 0.7 1.7 1 1 1 2 2 2 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase HATPase_c PF02518.26 ORF28393 - 1.5e-07 31.9 0.0 2.9e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF28393 - 0.04 13.8 0.0 0.065 13.1 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Fe-ADH PF00465.19 ORF28004 - 4.9e-113 377.6 7.3 5.6e-113 377.5 7.3 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 ORF28004 - 2.9e-17 63.2 5.5 5.7e-10 39.3 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase Peripla_BP_6 PF13458.6 ORF28004 - 0.0033 17.1 0.0 0.0065 16.2 0.0 1.5 1 0 0 1 1 1 1 Periplasmic binding protein Peptidase_S28 PF05577.12 ORF25604 - 4.4e-49 167.4 0.0 5.5e-49 167.1 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S37 PF05576.11 ORF25604 - 0.0013 17.5 0.0 0.051 12.2 0.0 2.1 2 0 0 2 2 2 2 PS-10 peptidase S37 Peptidase_S9 PF00326.21 ORF25604 - 0.0017 17.9 0.0 0.0025 17.3 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF25604 - 0.0085 15.8 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF25604 - 0.032 13.5 0.0 0.049 12.9 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 MORN PF02493.20 ORF21329 - 8.6e-70 226.7 105.3 6e-09 35.3 2.0 12.6 13 0 0 13 13 13 12 MORN repeat Glyco_hydro_1 PF00232.18 ORF16932 - 5.7e-115 384.3 0.3 6.4e-115 384.1 0.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Thioredoxin PF00085.20 ORF16390 - 3.5e-08 33.4 0.0 9.1e-08 32.0 0.0 1.7 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_6 PF13848.6 ORF16390 - 3.8e-07 30.2 0.0 0.017 15.1 0.0 3.2 2 1 1 3 3 3 3 Thioredoxin-like domain Hist_deacetyl PF00850.19 ORF14816 - 2.5e-76 257.1 0.0 3.1e-76 256.8 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Sterile PF03015.19 ORF14816 - 4.9 7.4 5.6 2 8.7 1.3 2.3 2 0 0 2 2 2 0 Male sterility protein PMD PF10536.9 ORF13155 - 0.61 9.1 2.6 3.1 6.8 0.3 2.4 2 0 0 2 2 2 0 Plant mobile domain DUF3911 PF13050.6 ORF13155 - 4.8 7.4 8.9 6.6 6.9 2.2 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3911) AAA PF00004.29 ORF10938 - 5.3e-42 143.4 0.0 9e-42 142.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF10938 - 6.8e-14 51.6 0.1 4.2e-13 49.1 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_lid_3 PF17862.1 ORF10938 - 3.7e-06 26.7 0.0 1.2e-05 25.0 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF10938 - 2.2e-05 24.9 0.0 0.00075 19.9 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF10938 - 6.7e-05 22.7 0.0 0.00012 21.8 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF10938 - 0.00025 21.1 0.0 0.00072 19.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF10938 - 0.00033 20.7 0.0 0.0014 18.6 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF10938 - 0.00066 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF10938 - 0.0011 18.6 0.3 0.11 12.0 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF10938 - 0.0013 18.9 0.0 0.004 17.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF10938 - 0.0015 18.8 0.4 0.042 14.1 0.2 2.9 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF10938 - 0.0037 16.5 0.0 0.006 15.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF10938 - 0.0053 16.9 0.0 0.009 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF10938 - 0.0074 16.7 0.0 0.022 15.1 0.0 1.9 2 0 0 2 2 1 1 RNA helicase AAA_18 PF13238.6 ORF10938 - 0.0078 16.8 0.0 0.017 15.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF10938 - 0.043 13.5 0.0 0.61 9.8 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF10938 - 0.054 12.9 0.1 0.11 11.9 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF10938 - 0.056 13.2 0.1 0.12 12.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain TIP49 PF06068.13 ORF10938 - 0.067 12.4 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain CPT PF07931.12 ORF10938 - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF10938 - 0.14 11.6 0.1 0.27 10.7 0.1 1.5 1 1 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF10938 - 0.15 11.6 0.3 0.45 10.0 0.0 1.9 2 1 0 2 2 2 0 P-loop containing dynein motor region MIT PF04212.18 ORF10938 - 0.19 11.8 3.2 0.16 12.1 1.5 1.9 2 0 0 2 2 1 0 MIT (microtubule interacting and transport) domain HEPN_Toprim_N PF18871.1 ORF104238 - 0.0012 18.9 3.2 0.11 12.4 0.0 2.2 1 1 1 2 2 2 2 HEPN/Toprim N-terminal domain 1 DUF5606 PF18347.1 ORF104238 - 0.11 12.7 0.5 0.24 11.6 0.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5606) Glyco_hydro_127 PF07944.12 ORF102849 - 1.6e-14 53.3 0.0 1.8e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 Beta-L-arabinofuranosidase, GH127 Pim PF16765.5 ORF102849 - 0.18 11.9 0.0 0.34 11.1 0.0 1.4 1 0 0 1 1 1 0 Pesticin immunity protein DUF1196 PF06709.11 NODE_14107_length_1183_cov_57.648084_g10586_i0forward_frame_3 - 0.1 12.8 0.5 2.9 8.1 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1196) PMP1_2 PF08114.11 NODE_14076_length_1184_cov_117.721497_g10562_i0reverse_frame_3 - 3.4 7.5 7.4 8.7 6.2 0.5 2.4 2 0 0 2 2 2 0 ATPase proteolipid family zf-C6H2 PF15801.5 NODE_14076_length_1184_cov_117.721497_g10562_i0forward_frame_3 - 0.086 13.2 1.7 0.21 11.9 1.7 1.7 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding HlyIII PF03006.20 ORF99084 - 1.3e-49 168.9 21.7 2.1e-49 168.3 21.7 1.3 1 1 0 1 1 1 1 Haemolysin-III related MerC PF03203.14 ORF99084 - 0.013 16.0 9.2 0.031 14.7 1.2 3.2 1 1 2 3 3 3 0 MerC mercury resistance protein DUF962 PF06127.11 ORF99084 - 0.013 15.6 3.3 0.39 10.8 3.3 2.9 1 1 0 1 1 1 0 Protein of unknown function (DUF962) DUF4538 PF15061.6 ORF99084 - 0.51 10.1 0.0 0.51 10.1 0.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4538) FixQ PF05545.11 ORF99084 - 2.9 7.9 8.8 6.5 6.8 0.1 3.8 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ DctQ PF04290.12 ORF99084 - 5.7 6.9 11.8 0.15 12.0 0.5 3.1 3 1 1 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF3290 PF11694.8 ORF99084 - 9.1 6.3 10.4 0.088 12.8 1.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3290) FAM176 PF14851.6 ORF85906 - 0.026 14.2 0.0 0.052 13.2 0.0 1.4 1 0 0 1 1 1 0 FAM176 family He_PIG PF05345.12 ORF85906 - 0.026 14.7 3.2 0.035 14.3 0.2 2.9 3 1 0 3 3 3 0 Putative Ig domain Peptidase_M3 PF01432.20 ORF84716 - 3.1e-154 514.6 0.0 3.5e-154 514.5 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 Transglut_core2 PF13369.6 ORF84716 - 0.14 11.7 0.0 0.79 9.3 0.0 2.0 2 0 0 2 2 2 0 Transglutaminase-like superfamily Pkinase PF00069.25 ORF82936 - 3.5e-32 111.8 0.0 8.1e-32 110.6 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82936 - 1.2e-11 44.4 0.0 1.8e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF82936 - 0.0036 17.7 0.5 0.015 15.7 0.0 2.2 2 1 1 3 3 3 1 EF-hand domain pair Kdo PF06293.14 ORF82936 - 0.023 14.1 0.1 0.048 13.0 0.1 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF82936 - 0.027 14.4 1.6 0.031 14.2 0.1 1.9 2 0 0 2 2 2 0 Phosphotransferase enzyme family EcKinase PF02958.20 ORF82936 - 0.1 11.9 0.1 0.22 10.8 0.0 1.5 2 0 0 2 2 2 0 Ecdysteroid kinase FMO-like PF00743.19 ORF79942 - 1.5e-14 53.4 0.0 3.3e-14 52.2 0.0 1.5 2 0 0 2 2 2 1 Flavin-binding monooxygenase-like K_oxygenase PF13434.6 ORF79942 - 5.5e-06 25.8 0.6 5.7e-05 22.4 0.1 2.6 2 1 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_3 PF13738.6 ORF79942 - 7e-06 25.5 0.0 1.3e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF79942 - 0.00047 19.5 0.0 0.035 13.4 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DUF3459 PF11941.8 ORF76841 - 6.5e-08 32.8 0.0 1.6e-07 31.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Alpha-amylase_C PF02806.18 ORF76841 - 3e-07 30.8 0.0 5.6e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 ORF76841 - 0.00018 21.2 0.0 0.00046 19.9 0.0 1.6 2 0 0 2 2 2 1 Alpha amylase, catalytic domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks28.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks28.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks28.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks28.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:57:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4538 PF15061.6 NODE_64416_length_250_cov_1.595349_g56475_i0forward_frame_2 - 0.43 10.4 2.1 9 6.1 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) Plasmid_parti PF01672.16 NODE_64409_length_250_cov_1.702326_g56468_i0reverse_frame_2 - 0.095 13.4 6.2 0.47 11.1 2.3 2.1 1 1 1 2 2 2 0 Putative plasmid partition protein Coilin_N PF15862.5 NODE_64406_length_250_cov_1.739535_g56465_i0reverse_frame_3 - 1.8 8.3 8.6 2.3 8.0 8.6 1.1 1 0 0 1 1 1 0 Coilin N-terminus Tmemb_9 PF05434.11 NODE_64400_length_250_cov_1.832558_g56459_i0reverse_frame_2 - 0.14 12.1 1.9 0.23 11.3 1.9 1.4 1 0 0 1 1 1 0 TMEM9 FAD_binding_7 PF03441.14 NODE_64391_length_250_cov_1.981395_g56450_i0forward_frame_2 - 0.082 12.4 0.3 0.11 12.0 0.3 1.2 1 0 0 1 1 1 0 FAD binding domain of DNA photolyase TMEM154 PF15102.6 NODE_64384_length_250_cov_2.144186_g56443_i0forward_frame_2 - 0.049 13.5 0.2 0.055 13.4 0.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Bac_luciferase PF00296.20 NODE_64383_length_250_cov_2.204651_g56442_i0forward_frame_3 - 0.022 14.2 0.1 0.028 13.9 0.1 1.0 1 0 0 1 1 1 0 Luciferase-like monooxygenase Exo_endo_phos PF03372.23 NODE_64376_length_250_cov_2.358140_g56435_i0reverse_frame_3 - 0.016 14.7 0.0 0.02 14.4 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family DUF116 PF01976.17 NODE_64374_length_250_cov_2.423256_g56433_i0reverse_frame_3 - 0.17 11.4 2.0 0.23 11.0 1.1 1.6 1 1 1 2 2 2 0 Protein of unknown function DUF116 OTT_1508_deam PF14441.6 NODE_64374_length_250_cov_2.423256_g56433_i0reverse_frame_2 - 0.02 14.9 0.6 0.023 14.7 0.6 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase Synaptobrevin PF00957.21 NODE_64372_length_250_cov_2.506977_g56431_i0forward_frame_2 - 0.019 14.8 2.1 0.034 13.9 1.5 1.6 1 1 1 2 2 2 0 Synaptobrevin V-SNARE_C PF12352.8 NODE_64372_length_250_cov_2.506977_g56431_i0forward_frame_2 - 0.097 13.0 0.2 0.9 9.9 0.1 2.1 1 1 1 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus PIRT PF15099.6 NODE_64371_length_250_cov_2.511628_g56430_i0forward_frame_3 - 0.13 11.8 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family CoxIIa PF08113.11 NODE_64370_length_250_cov_2.516279_g56429_i0forward_frame_3 - 0.11 12.3 0.7 0.11 12.3 0.7 2.0 3 0 0 3 3 3 0 Cytochrome c oxidase subunit IIa family DUF1658 PF07871.11 NODE_64369_length_250_cov_2.530233_g56428_i0reverse_frame_2 - 0.11 12.5 0.3 1 9.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) UPF0203 PF05254.12 NODE_64368_length_250_cov_2.548837_g56427_i0forward_frame_3 - 0.11 12.7 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF2120 PF09893.9 NODE_64365_length_250_cov_2.693023_g56424_i0reverse_frame_2 - 0.0036 17.4 0.1 0.0045 17.1 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2120) FERM_N PF09379.10 NODE_64365_length_250_cov_2.693023_g56424_i0reverse_frame_2 - 0.028 14.4 0.1 0.056 13.4 0.1 1.5 1 1 0 1 1 1 0 FERM N-terminal domain Spermine_synt_N PF17284.2 NODE_64365_length_250_cov_2.693023_g56424_i0forward_frame_3 - 0.029 14.3 0.7 0.042 13.7 0.7 1.3 1 0 0 1 1 1 0 Spermidine synthase tetramerisation domain Poly_export PF02563.16 NODE_64362_length_250_cov_2.776744_g56421_i0reverse_frame_2 - 4.5e-07 30.0 0.0 6.6e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis/export protein MR_MLE_C PF13378.6 NODE_64361_length_250_cov_2.790698_g56420_i0reverse_frame_2 - 1.7e-11 44.1 0.0 1.9e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like Thioredoxin_2 PF13098.6 NODE_64360_length_250_cov_2.879070_g56419_i0forward_frame_2 - 0.0025 18.2 0.0 0.003 18.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain P22_AR_C PF10548.9 NODE_64360_length_250_cov_2.879070_g56419_i0forward_frame_2 - 0.098 12.8 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 P22AR C-terminal domain QSOX_Trx1 PF18108.1 NODE_64360_length_250_cov_2.879070_g56419_i0forward_frame_2 - 0.1 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 QSOX Trx-like domain DUF2256 PF10013.9 NODE_64358_length_250_cov_2.902326_g56417_i0reverse_frame_3 - 0.064 13.4 0.3 0.11 12.6 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF1819 PF08849.11 NODE_64357_length_250_cov_3.079070_g56416_i0forward_frame_3 - 0.084 12.7 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Putative inner membrane protein (DUF1819) PMP1_2 PF08114.11 NODE_64356_length_250_cov_3.125581_g56415_i0forward_frame_3 - 0.52 10.1 1.9 1.1 9.0 1.9 1.6 1 1 0 1 1 1 0 ATPase proteolipid family HTH_Tnp_Tc5 PF03221.16 NODE_64351_length_250_cov_3.260465_g56410_i0forward_frame_3 - 0.11 12.5 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain PaaX_C PF08223.11 NODE_64349_length_250_cov_3.306977_g56408_i0reverse_frame_3 - 0.034 14.4 0.2 0.049 13.9 0.1 1.3 1 1 0 1 1 1 0 PaaX-like protein C-terminal domain zf-C3HC4 PF00097.25 NODE_64349_length_250_cov_3.306977_g56408_i0forward_frame_3 - 2.5 8.1 12.1 12 5.9 11.5 2.5 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) ATG11 PF10377.9 NODE_64348_length_250_cov_3.311628_g56407_i0reverse_frame_2 - 0.071 13.2 0.0 0.077 13.1 0.0 1.2 1 0 0 1 1 1 0 Autophagy-related protein 11 Gln-synt_N PF03951.19 NODE_64348_length_250_cov_3.311628_g56407_i0forward_frame_3 - 1.2e-09 37.7 0.1 1.3e-09 37.6 0.1 1.1 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain TTL PF03133.15 NODE_64347_length_250_cov_3.418605_g56406_i0reverse_frame_2 - 9.9e-28 97.1 0.5 1e-27 97.1 0.5 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family TetR_C_29 PF17938.1 NODE_64344_length_250_cov_4.116279_g56403_i0reverse_frame_3 - 1.8e-17 63.5 0.0 2e-17 63.4 0.0 1.0 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_4 PF08359.11 NODE_64344_length_250_cov_4.116279_g56403_i0reverse_frame_3 - 0.051 13.7 0.0 0.07 13.3 0.0 1.2 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region Gpi1 PF05024.15 NODE_64344_length_250_cov_4.116279_g56403_i0reverse_frame_3 - 0.093 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 N-acetylglucosaminyl transferase component (Gpi1) HNH PF01844.23 NODE_64343_length_250_cov_4.539535_g56402_i0reverse_frame_3 - 0.019 15.1 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 HNH endonuclease Lipocalin_5 PF13924.6 NODE_64342_length_250_cov_4.841860_g56401_i0forward_frame_2 - 0.094 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Lipocalin-like domain RabGAP-TBC PF00566.18 NODE_64341_length_250_cov_7.893023_g56400_i0forward_frame_2 - 3.8e-09 36.5 2.8 4.5e-09 36.3 2.8 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF390 PF04094.14 NODE_64338_length_250_cov_23.009302_g56397_i0forward_frame_2 - 0.12 10.7 5.0 0.12 10.7 5.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) Pkinase PF00069.25 NODE_64334_length_250_cov_32.362791_g56393_i0forward_frame_3 - 0.00038 19.9 1.7 0.00045 19.7 1.7 1.1 1 0 0 1 1 1 1 Protein kinase domain HHH_3 PF12836.7 NODE_64334_length_250_cov_32.362791_g56393_i0forward_frame_3 - 0.039 14.2 0.1 0.052 13.8 0.1 1.3 1 0 0 1 1 1 0 Helix-hairpin-helix motif LYRIC PF15686.5 NODE_64331_length_250_cov_36.869767_g56390_i0reverse_frame_3 - 0.98 8.9 9.7 1.2 8.6 9.7 1.0 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family GCP5-Mod21 PF14609.6 NODE_64330_length_250_cov_38.525581_g56389_i0forward_frame_2 - 0.09 11.1 0.6 0.094 11.0 0.6 1.2 1 0 0 1 1 1 0 gamma-Tubulin ring complex non-core subunit mod21 YjhX_toxin PF09857.9 NODE_64327_length_250_cov_42.232558_g56386_i0reverse_frame_2 - 0.054 13.5 0.6 2.4 8.2 0.0 2.1 1 1 1 2 2 2 0 Putative toxin of bacterial toxin-antitoxin pair Lectin_N PF03954.14 NODE_64327_length_250_cov_42.232558_g56386_i0reverse_frame_2 - 0.096 12.4 0.1 0.097 12.4 0.1 1.1 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain Myosin_TH1 PF06017.13 NODE_64319_length_250_cov_56.330233_g56378_i0reverse_frame_3 - 9.7e-08 31.9 0.1 1e-07 31.8 0.1 1.0 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding DUF4868 PF16162.5 NODE_64313_length_250_cov_68.655814_g56372_i0forward_frame_3 - 0.004 17.1 0.1 0.0049 16.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4868) RRP14 PF15459.6 NODE_64309_length_250_cov_74.586047_g56368_i0reverse_frame_2 - 0.0041 17.7 0.1 0.006 17.2 0.1 1.2 1 0 0 1 1 1 1 60S ribosome biogenesis protein Rrp14 Dehydrin PF00257.19 NODE_64309_length_250_cov_74.586047_g56368_i0forward_frame_3 - 0.053 14.1 1.2 0.055 14.0 1.2 1.2 1 0 0 1 1 1 0 Dehydrin Kv2channel PF03521.14 NODE_64306_length_250_cov_80.925581_g56365_i0forward_frame_3 - 0.043 13.2 0.1 0.053 12.9 0.1 1.1 1 0 0 1 1 1 0 Kv2 voltage-gated K+ channel DUF5515 PF17635.2 NODE_64301_length_250_cov_90.893023_g56360_i0forward_frame_2 - 0.12 13.0 0.0 0.2 12.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5515) SlyX PF04102.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 8.5e-06 26.3 4.5 2.6e-05 24.7 3.1 1.9 1 1 1 2 2 2 1 SlyX TMF_DNA_bd PF12329.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00012 22.0 3.3 0.00012 22.0 3.3 2.0 1 1 1 2 2 2 1 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00012 21.8 2.3 0.00012 21.8 2.3 2.2 1 1 1 2 2 2 1 Septum formation initiator TMF_TATA_bd PF12325.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00018 21.7 4.0 0.00033 20.8 3.8 1.7 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Phage_GP20 PF06810.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00019 21.2 5.3 0.0032 17.3 6.3 1.9 1 1 1 2 2 2 1 Phage minor structural protein GP20 PKcGMP_CC PF16808.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0003 20.6 3.8 0.14 12.1 0.5 3.7 2 1 2 4 4 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase GAS PF13851.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00041 19.8 4.1 0.00047 19.6 4.1 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding ADIP PF11559.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00043 20.4 6.6 0.00047 20.3 6.6 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Tropomyosin_1 PF12718.7 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00068 19.8 5.6 0.0009 19.4 5.6 1.3 1 0 0 1 1 1 1 Tropomyosin like CEP63 PF17045.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00077 19.4 5.4 0.00085 19.3 5.4 1.0 1 0 0 1 1 1 1 Centrosomal protein of 63 kDa Filament PF00038.21 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00078 19.1 5.5 0.00079 19.1 5.5 1.0 1 0 0 1 1 1 1 Intermediate filament protein HMMR_N PF15905.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0009 18.8 6.4 0.0011 18.5 6.4 1.2 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Fez1 PF06818.15 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00097 19.6 4.1 0.0012 19.3 4.1 1.2 1 0 0 1 1 1 1 Fez1 BST2 PF16716.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0012 19.4 2.2 0.0012 19.4 2.2 1.9 1 1 1 2 2 2 1 Bone marrow stromal antigen 2 DUF948 PF06103.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0012 19.1 0.6 0.0018 18.5 0.6 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) BRE1 PF08647.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0012 18.8 2.6 0.0012 18.8 2.6 1.4 1 1 0 1 1 1 1 BRE1 E3 ubiquitin ligase TPR_MLP1_2 PF07926.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0013 18.8 4.6 0.0014 18.7 4.6 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein Csm1_N PF18504.1 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0017 18.6 9.5 0.003 17.9 1.8 2.9 1 1 2 3 3 3 1 Csm1 N-terminal domain Atg14 PF10186.9 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0018 17.5 5.1 0.0021 17.2 5.1 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 FliD_C PF07195.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0018 17.7 2.9 0.0021 17.5 2.9 1.1 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 C-terminus HrpB7 PF09486.10 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0027 18.1 0.2 0.003 18.0 0.2 1.2 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) Spc7 PF08317.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0033 16.4 6.3 0.0044 16.0 6.3 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein Lebercilin PF15619.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0035 17.0 6.1 0.013 15.2 6.1 1.8 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF812 PF05667.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0036 16.3 5.7 0.004 16.1 5.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) ATG16 PF08614.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0037 17.5 4.9 0.0052 17.0 4.9 1.3 1 1 0 1 1 1 1 Autophagy protein 16 (ATG16) AAA_13 PF13166.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0039 15.9 4.3 0.0043 15.8 4.3 1.0 1 0 0 1 1 1 1 AAA domain UPF0242 PF06785.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0047 17.1 2.5 0.0047 17.1 2.5 1.6 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0242) N-terminus PspA_IM30 PF04012.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.005 16.5 5.2 0.038 13.6 4.9 1.9 1 1 1 2 2 2 2 PspA/IM30 family Rab_bind PF16704.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.005 16.8 1.0 0.0064 16.5 0.4 1.5 1 1 1 2 2 1 1 Rab binding domain TolA_bind_tri PF16331.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0051 16.9 7.8 0.029 14.4 7.7 1.9 1 1 2 3 3 3 1 TolA binding protein trimerisation DUF3552 PF12072.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0054 16.2 4.5 0.0066 15.9 4.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) DUF4200 PF13863.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0056 17.1 2.4 0.0056 17.1 2.4 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF4200) Gp58 PF07902.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0056 15.0 3.3 0.0058 15.0 3.3 1.0 1 0 0 1 1 1 1 gp58-like protein Med9 PF07544.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.007 16.4 8.2 0.026 14.6 2.8 2.3 1 1 1 2 2 2 1 RNA polymerase II transcription mediator complex subunit 9 DUF4795 PF16043.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0075 15.9 0.8 0.0075 15.9 0.8 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4795) FlxA PF14282.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0089 16.0 14.5 0.009 16.0 7.0 2.0 1 1 1 2 2 2 2 FlxA-like protein DUF641 PF04859.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.01 16.2 2.4 0.037 14.4 2.4 2.0 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF1465 PF07323.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.011 15.6 0.8 0.012 15.5 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) LPP PF04728.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.011 16.1 5.0 0.1 13.0 2.2 2.7 1 1 2 3 3 3 0 Lipoprotein leucine-zipper GrpE PF01025.19 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.012 15.3 3.6 0.015 15.0 3.6 1.3 1 0 0 1 1 1 0 GrpE Prefoldin_2 PF01920.20 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.012 15.6 1.4 0.012 15.6 1.4 2.2 1 1 1 2 2 2 0 Prefoldin subunit Cep57_MT_bd PF06657.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.012 16.0 2.4 0.021 15.3 2.5 1.5 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 APG6_N PF17675.1 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.013 16.0 3.4 0.014 15.9 3.4 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region BLOC1_2 PF10046.9 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.014 15.7 3.3 0.026 14.8 2.8 1.9 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CLZ PF16526.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.015 15.7 2.1 0.023 15.0 2.0 1.5 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4618 PF15397.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.015 14.7 4.7 0.029 13.8 2.7 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) CASP_C PF08172.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.016 14.5 4.3 0.099 12.0 1.5 2.0 1 1 1 2 2 2 0 CASP C terminal Spectrin PF00435.21 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.019 15.4 2.2 0.078 13.5 2.1 1.4 1 1 0 1 1 1 0 Spectrin repeat Paralemmin PF03285.15 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.02 14.5 5.2 0.022 14.4 4.9 1.3 1 1 0 1 1 1 0 Paralemmin Tho2 PF11262.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.02 14.1 6.1 0.021 14.0 6.1 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF4407 PF14362.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.021 14.2 2.7 0.029 13.7 2.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Fib_alpha PF08702.10 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.023 14.9 2.7 0.023 14.9 2.7 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.023 14.7 3.1 0.05 13.6 3.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) ABC_tran_CTD PF16326.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.024 14.9 3.0 0.17 12.1 2.9 2.3 1 1 0 1 1 1 0 ABC transporter C-terminal domain DUF4164 PF13747.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.027 14.8 2.0 0.066 13.5 2.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4164) Prefoldin PF02996.17 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.027 14.4 5.1 0.039 13.9 1.1 2.2 1 1 1 2 2 2 0 Prefoldin subunit Laminin_II PF06009.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.034 14.2 4.3 0.049 13.6 4.3 1.4 1 1 0 1 1 1 0 Laminin Domain II ZapB PF06005.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.039 14.4 5.4 0.048 14.1 5.0 1.4 1 1 0 1 1 1 0 Cell division protein ZapB Fzo_mitofusin PF04799.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.039 13.5 3.5 0.07 12.7 3.5 1.5 1 1 0 1 1 1 0 fzo-like conserved region DUF3450 PF11932.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.043 13.1 4.2 0.047 13.0 4.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) V_ATPase_I PF01496.19 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.045 11.7 3.4 0.049 11.6 3.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF16 PF01519.16 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.047 14.2 6.6 0.068 13.7 6.6 1.4 1 1 0 1 1 1 0 Protein of unknown function DUF16 Swi5 PF07061.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.049 13.7 4.3 0.4 10.8 4.2 2.2 1 1 1 2 2 2 0 Swi5 FAM76 PF16046.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.054 12.9 6.8 0.062 12.7 6.8 1.0 1 0 0 1 1 1 0 FAM76 protein CENP-H PF05837.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.057 13.8 5.8 0.06 13.8 5.8 1.0 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF5082 PF16888.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.062 13.6 8.9 0.33 11.2 8.4 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) NPV_P10 PF05531.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.068 13.6 1.3 0.22 12.0 0.6 1.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein FlaC_arch PF05377.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.07 13.5 4.9 0.12 12.8 1.3 2.2 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF4140 PF13600.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.076 13.5 3.0 0.11 12.9 2.0 1.8 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Allexi_40kDa PF05549.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.08 12.4 1.3 0.087 12.3 1.3 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein Med4 PF10018.9 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.095 12.4 3.8 0.11 12.2 3.8 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Spc24 PF08286.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.1 12.9 4.0 0.14 12.4 4.0 1.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 YlqD PF11068.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.11 12.9 7.6 0.22 11.9 7.3 1.6 1 1 1 2 2 2 0 YlqD protein Fmp27_WPPW PF10359.9 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.11 11.3 8.1 0.17 10.7 7.5 1.5 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain YabA PF06156.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.14 12.8 2.4 0.17 12.5 2.4 1.3 1 0 0 1 1 1 0 Initiation control protein YabA DUF4349 PF14257.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.16 11.4 3.3 0.25 10.7 2.4 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4349) DUF5320 PF17253.2 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.17 13.0 3.9 0.24 12.5 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5320) ACCA PF03255.14 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.17 11.7 4.0 0.32 10.9 4.0 1.6 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF4094 PF13334.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.23 11.9 4.1 0.85 10.1 0.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) TMPIT PF07851.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.24 10.6 4.9 0.26 10.5 4.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein bZIP_2 PF07716.15 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.4 10.8 7.3 0.12 12.4 1.3 2.5 1 1 1 2 2 2 0 Basic region leucine zipper DUF5097 PF17020.5 NODE_64294_length_250_cov_113.925581_g56353_i0reverse_frame_3 - 0.0023 18.3 0.2 0.0024 18.2 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5097) DUF3767 PF12597.8 NODE_64291_length_250_cov_127.916279_g56350_i0forward_frame_2 - 0.066 13.0 1.3 0.075 12.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) Tom22 PF04281.13 NODE_64290_length_250_cov_137.441860_g56349_i0reverse_frame_2 - 0.013 15.3 0.2 0.014 15.1 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 AAA_7 PF12775.7 NODE_64288_length_250_cov_169.855814_g56347_i0forward_frame_3 - 2.5e-12 46.7 0.0 2.7e-12 46.6 0.0 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region T2SSE PF00437.20 NODE_64288_length_250_cov_169.855814_g56347_i0forward_frame_3 - 0.00036 19.7 0.0 0.00039 19.6 0.0 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein RsgA_GTPase PF03193.16 NODE_64288_length_250_cov_169.855814_g56347_i0forward_frame_3 - 0.06 13.3 0.0 0.064 13.1 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase NB-ARC PF00931.22 NODE_64288_length_250_cov_169.855814_g56347_i0forward_frame_3 - 0.11 11.7 0.0 0.21 10.7 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain DUF2388 PF09498.10 NODE_64281_length_250_cov_370.279070_g56340_i0reverse_frame_3 - 0.059 13.4 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2388) RCR PF12273.8 NODE_64279_length_250_cov_703.539535_g56338_i0reverse_frame_2 - 0.075 13.7 0.0 0.077 13.6 0.0 1.1 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red YajC PF02699.15 NODE_64279_length_250_cov_703.539535_g56338_i0reverse_frame_2 - 0.38 10.6 1.0 0.49 10.3 1.0 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit Toxin_32 PF08120.11 NODE_64278_length_250_cov_9558.976744_g56337_i0forward_frame_3 - 0.14 12.0 0.2 0.26 11.2 0.2 1.4 1 0 0 1 1 1 0 Tamulustoxin family Endosulfine PF04667.17 NODE_64278_length_250_cov_9558.976744_g56337_i0forward_frame_2 - 0.15 12.2 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 cAMP-regulated phosphoprotein/endosulfine conserved region COX5B PF01215.19 NODE_64276_length_251_cov_0.740741_g56335_i0forward_frame_3 - 0.23 11.1 0.2 0.29 10.8 0.2 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb GpcrRhopsn4 PF10192.9 NODE_64275_length_251_cov_0.800926_g56334_i0reverse_frame_3 - 5.6e-07 29.2 0.4 6e-07 29.1 0.4 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain MORN_2 PF07661.13 NODE_64272_length_251_cov_0.921296_g56331_i0reverse_frame_3 - 0.096 13.0 2.1 0.17 12.2 0.1 2.5 2 1 0 2 2 2 0 MORN repeat variant MASE2 PF05230.11 NODE_64271_length_251_cov_0.981481_g56330_i0reverse_frame_2 - 0.068 13.3 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain Ribosomal_L29e PF01779.17 NODE_64269_length_251_cov_1.018519_g56328_i0reverse_frame_2 - 0.13 12.6 4.0 0.28 11.5 0.0 2.4 2 1 0 2 2 2 0 Ribosomal L29e protein family COX7C PF02935.16 NODE_64267_length_251_cov_1.046296_g56326_i0reverse_frame_3 - 0.032 14.5 0.3 0.061 13.6 0.3 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc Amidoligase_2 PF12224.8 NODE_64267_length_251_cov_1.046296_g56326_i0reverse_frame_3 - 0.046 13.4 0.0 0.049 13.3 0.0 1.0 1 0 0 1 1 1 0 Putative amidoligase enzyme zf-C2H2_7 PF15269.6 NODE_64263_length_251_cov_1.106481_g56322_i0reverse_frame_2 - 0.16 12.0 1.5 0.8 9.8 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger RecQ_Zn_bind PF16124.5 NODE_64262_length_251_cov_1.111111_g56321_i0reverse_frame_3 - 0.035 14.8 0.8 0.046 14.4 0.8 1.2 1 0 0 1 1 1 0 RecQ zinc-binding Pim PF16765.5 NODE_64256_length_251_cov_1.236111_g56315_i0reverse_frame_2 - 0.0032 17.6 0.4 0.004 17.3 0.3 1.3 1 1 0 1 1 1 1 Pesticin immunity protein Nepo_coat PF03391.15 NODE_64255_length_251_cov_1.250000_g56314_i0reverse_frame_3 - 0.0018 17.8 0.0 0.0022 17.5 0.0 1.1 1 0 0 1 1 1 1 Nepovirus coat protein, central domain tRNA_lig_CPD PF08302.11 NODE_64253_length_251_cov_1.259259_g56312_i0reverse_frame_2 - 0.0055 16.2 0.1 0.0055 16.2 0.1 1.1 1 0 0 1 1 1 1 Fungal tRNA ligase phosphodiesterase domain TMEM132D_C PF15706.5 NODE_64251_length_251_cov_1.268519_g56310_i0reverse_frame_2 - 0.029 14.2 0.1 0.031 14.0 0.1 1.1 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term UL41A PF17591.2 NODE_64251_length_251_cov_1.268519_g56310_i0reverse_frame_2 - 0.16 12.1 1.0 0.22 11.6 1.0 1.3 1 0 0 1 1 1 0 Herpesvirus UL41A WTF PF03303.13 NODE_64249_length_251_cov_1.296296_g56308_i0forward_frame_2 - 0.14 11.9 5.2 0.13 12.0 5.2 1.1 1 0 0 1 1 1 0 WTF protein MNSV_P7B PF06692.11 NODE_64249_length_251_cov_1.296296_g56308_i0forward_frame_2 - 1.6 8.7 5.1 0.21 11.6 1.3 1.5 2 0 0 2 2 2 0 Melon necrotic spot virus P7B protein zf-TFIIIC PF12660.7 NODE_64246_length_251_cov_1.328704_g56305_i0reverse_frame_3 - 0.078 12.9 0.5 0.14 12.1 0.2 1.7 1 1 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex DUF3079 PF11278.8 NODE_64239_length_251_cov_1.435185_g56298_i0reverse_frame_2 - 0.076 12.8 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3079) DUF3746 PF12562.8 NODE_64237_length_251_cov_1.462963_g56296_i0forward_frame_3 - 1 9.3 5.7 2.5 8.1 5.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3746) SWIM PF04434.17 NODE_64235_length_251_cov_1.467593_g56294_i0reverse_frame_3 - 0.011 15.4 3.0 0.017 14.8 3.0 1.5 1 1 0 1 1 1 0 SWIM zinc finger Med21 PF11221.8 NODE_64234_length_251_cov_1.476852_g56293_i0forward_frame_3 - 0.0077 16.5 0.1 0.0081 16.4 0.1 1.2 1 0 0 1 1 1 1 Subunit 21 of Mediator complex Pox_P35 PF03213.14 NODE_64233_length_251_cov_1.476852_g56292_i0reverse_frame_2 - 0.14 11.3 1.1 0.15 11.3 1.1 1.1 1 0 0 1 1 1 0 Poxvirus P35 protein ATP_bind_2 PF03668.15 NODE_64233_length_251_cov_1.476852_g56292_i0forward_frame_2 - 0.029 13.7 0.1 0.034 13.5 0.1 1.1 1 0 0 1 1 1 0 P-loop ATPase protein family LMBR1 PF04791.16 NODE_64233_length_251_cov_1.476852_g56292_i0forward_frame_2 - 0.24 10.2 1.3 0.25 10.2 1.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein API5 PF05918.11 NODE_64232_length_251_cov_1.481481_g56291_i0reverse_frame_2 - 0.053 12.3 0.1 0.053 12.3 0.1 1.1 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) MCR PF18509.1 NODE_64227_length_251_cov_1.546296_g56286_i0forward_frame_3 - 3.7 7.2 10.8 1.4 8.5 0.5 3.1 3 0 0 3 3 3 0 Magnetochrome domain CRISPR_Cas9_WED PF18061.1 NODE_64225_length_251_cov_1.597222_g56284_i0reverse_frame_2 - 0.0055 16.8 2.4 0.0062 16.6 2.4 1.0 1 0 0 1 1 1 1 CRISPR-Cas9 WED domain LAGLIDADG_WhiA PF14527.6 NODE_64225_length_251_cov_1.597222_g56284_i0reverse_frame_2 - 0.017 15.2 2.1 0.019 15.0 2.1 1.1 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain EIF4E-T PF10477.9 NODE_64225_length_251_cov_1.597222_g56284_i0reverse_frame_2 - 0.16 10.7 2.5 0.17 10.7 2.5 1.0 1 0 0 1 1 1 0 Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E SK_channel PF03530.14 NODE_64225_length_251_cov_1.597222_g56284_i0forward_frame_2 - 0.0059 16.6 3.1 0.0071 16.3 3.1 1.0 1 0 0 1 1 1 1 Calcium-activated SK potassium channel Atypical_Card PF18461.1 NODE_64224_length_251_cov_1.601852_g56283_i0reverse_frame_3 - 0.038 14.2 0.0 0.046 13.9 0.0 1.2 1 0 0 1 1 1 0 Atypical caspase recruitment domain SARS_X4 PF08779.10 NODE_64221_length_251_cov_1.606481_g56280_i0reverse_frame_2 - 0.014 15.6 0.0 0.017 15.3 0.0 1.1 1 0 0 1 1 1 0 SARS coronavirus X4 like GSH_synth_ATP PF03917.17 NODE_64219_length_251_cov_1.629630_g56278_i0reverse_frame_3 - 6.5e-15 54.8 0.0 6.8e-15 54.7 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain K1 PF02960.14 NODE_64216_length_251_cov_1.638889_g56275_i0reverse_frame_3 - 0.032 14.3 0.3 0.032 14.3 0.3 1.1 1 0 0 1 1 1 0 K1 glycoprotein LdpA_C PF12617.8 NODE_64214_length_251_cov_1.657407_g56273_i0forward_frame_3 - 0.17 11.4 0.1 0.28 10.8 0.0 1.3 1 1 0 1 1 1 0 Iron-Sulfur binding protein C terminal SLAC1 PF03595.17 NODE_64212_length_251_cov_1.666667_g56271_i0reverse_frame_3 - 0.18 11.1 0.1 0.21 10.8 0.1 1.1 1 0 0 1 1 1 0 Voltage-dependent anion channel Imm30 PF15565.6 NODE_64209_length_251_cov_1.699074_g56268_i0reverse_frame_2 - 0.0036 17.3 0.9 0.0043 17.1 0.9 1.1 1 0 0 1 1 1 1 Immunity protein 30 PurA PF04845.13 NODE_64209_length_251_cov_1.699074_g56268_i0reverse_frame_2 - 0.015 14.7 0.2 0.016 14.5 0.2 1.0 1 0 0 1 1 1 0 PurA ssDNA and RNA-binding protein CBM77 PF18283.1 NODE_64209_length_251_cov_1.699074_g56268_i0forward_frame_3 - 0.012 15.9 0.1 0.018 15.4 0.1 1.3 1 0 0 1 1 1 0 Carbohydrate binding module 77 HEAT_UF PF18817.1 NODE_64205_length_251_cov_1.773148_g56264_i0reverse_frame_2 - 0.01 16.1 2.0 0.014 15.6 2.0 1.2 1 0 0 1 1 1 0 Repeat of uncharacterized protein PH0542 Mrpl_C PF18502.1 NODE_64205_length_251_cov_1.773148_g56264_i0reverse_frame_2 - 0.045 14.0 0.1 0.052 13.8 0.1 1.2 1 0 0 1 1 1 0 54S ribosomal protein L8 C-terminal domain Antiterm PF03589.13 NODE_64205_length_251_cov_1.773148_g56264_i0reverse_frame_2 - 0.11 12.9 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Antitermination protein Filament PF00038.21 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.00082 19.1 3.3 0.00095 18.8 3.3 1.0 1 0 0 1 1 1 1 Intermediate filament protein CEP209_CC5 PF16574.5 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.0042 17.3 6.2 0.46 10.7 0.9 2.0 1 1 1 2 2 2 2 Coiled-coil region of centrosome protein CE290 Tropomyosin_1 PF12718.7 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.015 15.5 9.4 0.026 14.7 9.4 1.4 1 1 0 1 1 1 0 Tropomyosin like SlyX PF04102.12 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.015 15.9 4.5 0.024 15.2 1.9 2.0 1 1 0 2 2 2 0 SlyX Exonuc_VII_L PF02601.15 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.025 14.2 3.1 0.03 13.9 3.1 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit YqaH PF17448.2 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.044 14.1 2.7 0.048 14.0 1.1 1.8 1 1 1 2 2 2 0 Uncharacterized YqaH-like DUF1053 PF06327.14 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.044 14.3 7.3 0.055 14.0 7.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1053) LUC7 PF03194.15 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.05 13.3 4.6 0.047 13.3 3.1 1.6 1 1 0 1 1 1 0 LUC7 N_terminus BshC PF10079.9 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.057 12.2 5.6 0.064 12.0 5.6 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC XhlA PF10779.9 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.078 13.2 10.3 0.2 11.9 1.9 2.1 1 1 1 2 2 2 0 Haemolysin XhlA Fib_alpha PF08702.10 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.078 13.2 7.7 0.51 10.5 0.5 2.1 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Baculo_PEP_C PF04513.12 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.081 13.0 1.2 0.096 12.7 1.2 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus HR1 PF02185.16 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.094 12.8 6.6 0.54 10.4 6.6 1.9 1 1 0 1 1 1 0 Hr1 repeat ARD PF03079.14 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.11 12.6 5.3 0.12 12.6 5.3 1.0 1 0 0 1 1 1 0 ARD/ARD' family ING PF12998.7 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.11 13.0 8.3 0.19 12.4 8.3 1.4 1 1 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding Csm1_N PF18504.1 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.16 12.3 8.4 1.6 9.2 1.1 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain ISG65-75 PF11727.8 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.2 10.9 5.8 0.24 10.6 5.8 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein FliD_N PF02465.18 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.23 12.2 6.4 0.6 10.8 6.4 1.6 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus DUF4407 PF14362.6 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.23 10.7 3.1 0.3 10.4 3.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) BLOC1_2 PF10046.9 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.24 11.7 8.5 1.7 9.0 7.8 2.0 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 NPV_P10 PF05531.12 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.24 11.9 4.9 4.9 7.7 1.8 2.1 1 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Prefoldin PF02996.17 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.26 11.2 10.8 2.2 8.2 1.0 2.1 2 0 0 2 2 2 0 Prefoldin subunit Nup88 PF10168.9 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.53 8.0 6.4 0.63 7.8 6.4 1.0 1 0 0 1 1 1 0 Nuclear pore component AI-2E_transport PF01594.16 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.55 9.3 1.3 0.64 9.1 1.3 1.0 1 0 0 1 1 1 0 AI-2E family transporter TMPIT PF07851.13 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.62 9.3 3.5 0.74 9.0 3.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4250 PF14056.6 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.65 10.0 5.5 0.49 10.4 2.2 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4250) YtxH PF12732.7 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 1.8 9.2 5.9 6.9 7.3 5.9 1.9 1 1 0 1 1 1 0 YtxH-like protein KID PF02524.14 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 6.7 7.3 6.9 21 5.8 0.1 3.5 3 0 0 3 3 3 0 KID repeat RALF PF05498.11 NODE_64201_length_251_cov_1.833333_g56260_i0reverse_frame_2 - 0.048 14.6 1.8 1.5 9.8 0.0 2.6 2 1 1 3 3 3 0 Rapid ALkalinization Factor (RALF) HNF-1B_C PF04812.13 NODE_64196_length_251_cov_1.967593_g56255_i0forward_frame_3 - 0.12 12.2 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus DUF4528 PF15031.6 NODE_64194_length_251_cov_1.990741_g56253_i0forward_frame_3 - 0.11 12.6 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) CAT_RBD PF03123.15 NODE_64192_length_251_cov_2.032407_g56251_i0forward_frame_2 - 1.1 9.2 5.0 0.22 11.5 1.6 1.6 2 0 0 2 2 2 0 CAT RNA binding domain FlxA PF14282.6 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.012 15.5 1.8 0.018 15.0 1.8 1.4 1 1 0 1 1 1 0 FlxA-like protein Prefoldin_2 PF01920.20 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.021 14.8 2.0 0.021 14.8 2.0 1.6 2 0 0 2 2 2 0 Prefoldin subunit Fib_alpha PF08702.10 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.03 14.5 2.4 0.053 13.7 2.4 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family FlaC_arch PF05377.11 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.031 14.6 2.5 0.14 12.6 0.5 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Spc24 PF08286.11 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.032 14.5 1.7 0.043 14.0 1.7 1.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 Sec34 PF04136.15 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.033 14.1 1.4 19 5.1 0.0 2.0 1 1 0 1 1 1 0 Sec34-like family Baculo_PEP_C PF04513.12 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.042 13.9 1.2 0.057 13.5 1.2 1.3 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus RasGAP_C PF03836.15 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.054 13.6 3.2 0.07 13.3 3.2 1.2 1 0 0 1 1 1 0 RasGAP C-terminus GIT_CC PF16559.5 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.088 12.7 1.5 0.22 11.4 1.5 1.7 1 1 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor H-kinase_dim PF02895.14 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.1 13.0 0.8 0.16 12.4 0.3 1.5 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain DUF2205 PF10224.9 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.2 11.7 3.3 0.23 11.5 2.6 1.5 1 1 0 1 1 1 0 Short coiled-coil protein DUF3573 PF12097.8 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.21 10.4 0.5 0.2 10.4 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) Peptidase_A22B PF04258.13 NODE_64184_length_251_cov_2.268519_g56243_i0forward_frame_3 - 1.7e-12 47.5 5.9 1.8e-12 47.4 5.9 1.0 1 0 0 1 1 1 1 Signal peptide peptidase Fimbrillin_C PF15495.6 NODE_64183_length_251_cov_2.273148_g56242_i0reverse_frame_3 - 0.12 12.9 0.1 0.17 12.3 0.1 1.3 1 0 0 1 1 1 0 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal DUF688 PF05097.12 NODE_64182_length_251_cov_2.310185_g56241_i0reverse_frame_3 - 0.81 8.8 8.4 0.77 8.9 8.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF688) YABBY PF04690.13 NODE_64182_length_251_cov_2.310185_g56241_i0reverse_frame_2 - 0.42 11.2 5.7 0.47 11.0 5.7 1.0 1 0 0 1 1 1 0 YABBY protein zf-AN1 PF01428.16 NODE_64181_length_251_cov_2.328704_g56240_i0forward_frame_3 - 0.017 15.3 1.3 0.024 14.8 1.3 1.2 1 0 0 1 1 1 0 AN1-like Zinc finger ASC PF00858.24 NODE_64174_length_251_cov_2.449074_g56233_i0reverse_frame_3 - 0.0026 16.8 0.1 0.0026 16.8 0.1 1.0 1 0 0 1 1 1 1 Amiloride-sensitive sodium channel SMP_LBD PF17047.5 NODE_64171_length_251_cov_2.587963_g56230_i0reverse_frame_2 - 5.8e-06 25.9 0.0 5.9e-06 25.9 0.0 1.0 1 0 0 1 1 1 1 Synaptotagmin-like mitochondrial-lipid-binding domain HnRNPA1 PF11627.8 NODE_64171_length_251_cov_2.587963_g56230_i0reverse_frame_2 - 0.038 14.2 0.3 0.053 13.7 0.3 1.2 1 0 0 1 1 1 0 Nuclear factor hnRNPA1 Peptidase_U32 PF01136.19 NODE_64171_length_251_cov_2.587963_g56230_i0forward_frame_2 - 0.17 11.0 0.1 0.19 10.8 0.1 1.0 1 0 0 1 1 1 0 Peptidase family U32 DUF4649 PF15507.6 NODE_64169_length_251_cov_2.625000_g56228_i0reverse_frame_3 - 0.095 12.7 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4649) 5-FTHF_cyc-lig PF01812.20 NODE_64165_length_251_cov_2.722222_g56224_i0forward_frame_3 - 0.064 13.1 0.1 0.075 12.9 0.1 1.1 1 0 0 1 1 1 0 5-formyltetrahydrofolate cyclo-ligase family Ydr279_N PF17745.1 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_3 - 0.11 12.8 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Ydr279p protein triple barrel domain Cep57_CLD_2 PF14197.6 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.0074 16.4 0.3 4.4 7.5 0.0 2.2 2 0 0 2 2 2 2 Centrosome localisation domain of PPC89 SIKE PF05769.11 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.015 15.2 0.2 0.022 14.7 0.2 1.3 1 1 0 1 1 1 0 SIKE family Csm1_N PF18504.1 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.026 14.9 0.4 0.039 14.3 0.4 1.3 1 0 0 1 1 1 0 Csm1 N-terminal domain HALZ PF02183.18 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.034 14.4 2.1 0.2 11.9 0.2 2.3 2 0 0 2 2 2 0 Homeobox associated leucine zipper ZapB PF06005.12 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.041 14.3 1.0 0.093 13.2 1.0 1.6 1 1 0 1 1 1 0 Cell division protein ZapB bZIP_1 PF00170.21 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.13 12.4 1.4 2 8.5 0.7 2.1 1 1 1 2 2 2 0 bZIP transcription factor TMF_DNA_bd PF12329.8 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.18 11.8 2.3 4.8 7.3 0.2 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.41 10.5 3.6 10 6.0 3.6 2.2 1 1 0 1 1 1 0 Septum formation initiator DUF2934 PF11154.8 NODE_64159_length_251_cov_2.935185_g56218_i0reverse_frame_3 - 4.7 7.0 4.8 9.5 6.0 0.2 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2934) HILPDA PF15220.6 NODE_64159_length_251_cov_2.935185_g56218_i0forward_frame_3 - 0.51 10.5 5.3 3 8.0 0.2 2.8 2 1 1 3 3 3 0 Hypoxia-inducible lipid droplet-associated CdiI_2 PF18593.1 NODE_64156_length_251_cov_3.046296_g56215_i0reverse_frame_2 - 0.087 13.5 0.0 0.11 13.2 0.0 1.1 1 0 0 1 1 1 0 CdiI immunity protein TniB PF05621.11 NODE_64155_length_251_cov_3.138889_g56214_i0reverse_frame_2 - 0.21 11.0 0.0 0.23 10.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial TniB protein zf-C2H2_2 PF12756.7 NODE_64145_length_251_cov_3.694444_g56204_i0reverse_frame_3 - 0.069 13.5 0.4 0.074 13.4 0.4 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2H2 PF00096.26 NODE_64143_length_251_cov_4.347222_g56202_i0forward_frame_2 - 4.5e-05 23.7 3.2 4.5e-05 23.7 3.2 2.1 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_64143_length_251_cov_4.347222_g56202_i0forward_frame_2 - 0.0012 19.5 3.0 0.0012 19.5 3.0 2.3 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_64143_length_251_cov_4.347222_g56202_i0forward_frame_2 - 0.02 15.2 0.4 0.02 15.2 0.4 1.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-CSL PF05207.13 NODE_64142_length_251_cov_4.449074_g56201_i0reverse_frame_2 - 1.4 8.7 9.2 3.3 7.5 0.4 2.2 1 1 1 2 2 2 0 CSL zinc finger Comm PF15957.5 NODE_64142_length_251_cov_4.449074_g56201_i0forward_frame_2 - 0.04 14.3 0.1 0.046 14.1 0.1 1.1 1 0 0 1 1 1 0 Commissureless RunxI PF08504.11 NODE_64141_length_251_cov_5.060185_g56200_i0reverse_frame_3 - 0.1 13.3 2.4 0.14 12.9 2.4 1.2 1 0 0 1 1 1 0 Runx inhibition domain MHC_II_alpha PF00993.20 NODE_64139_length_251_cov_10.481481_g56198_i0reverse_frame_2 - 0.2 11.3 0.0 0.27 10.9 0.0 1.1 1 0 0 1 1 1 0 Class II histocompatibility antigen, alpha domain DUF2254 PF10011.9 NODE_64133_length_251_cov_33.402778_g56192_i0reverse_frame_3 - 0.41 9.4 0.6 0.43 9.3 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF4681 PF15732.5 NODE_64133_length_251_cov_33.402778_g56192_i0forward_frame_2 - 0.049 13.9 0.1 0.066 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4681) DUF4611 PF15387.6 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_3 - 1.4 9.2 11.1 1 9.6 0.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4611) Ac76 PF05814.11 NODE_64128_length_251_cov_47.023148_g56187_i0reverse_frame_3 - 0.083 12.9 1.8 0.1 12.6 1.8 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) SR-25 PF10500.9 NODE_64128_length_251_cov_47.023148_g56187_i0forward_frame_3 - 0.11 12.1 2.3 0.11 12.1 2.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein BBIP10 PF14777.6 NODE_64127_length_251_cov_47.828704_g56186_i0forward_frame_3 - 0.028 14.0 0.5 0.052 13.1 0.5 1.5 1 0 0 1 1 1 0 Cilia BBSome complex subunit 10 2-oxoacid_dh PF00198.23 NODE_64115_length_251_cov_59.152778_g56174_i0reverse_frame_2 - 4.3e-12 46.0 0.0 5.2e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SAM_Ste50p PF09235.10 NODE_64113_length_251_cov_61.273148_g56172_i0reverse_frame_2 - 0.055 13.7 0.0 0.078 13.2 0.0 1.3 1 1 0 1 1 1 0 Ste50p, sterile alpha motif DUF2076 PF09849.9 NODE_64111_length_251_cov_62.958333_g56170_i0reverse_frame_3 - 0.012 15.6 4.0 0.013 15.5 4.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Memo PF01875.17 NODE_64102_length_251_cov_80.810185_g56161_i0forward_frame_2 - 1.3e-05 24.5 0.0 1.3e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Memo-like protein MRAP PF15183.6 NODE_64097_length_251_cov_96.055556_g56156_i0forward_frame_3 - 0.14 12.1 0.1 0.18 11.8 0.1 1.2 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family LVIVD PF08309.11 NODE_64095_length_251_cov_98.000000_g56154_i0forward_frame_3 - 0.13 11.6 0.0 0.2 11.0 0.0 1.3 1 0 0 1 1 1 0 LVIVD repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks290.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks290.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks290.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks290.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:08:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NACHT PF05729.12 NODE_64094_length_251_cov_100.685185_g56153_i0reverse_frame_3 - 0.061 13.2 0.1 0.064 13.2 0.1 1.1 1 0 0 1 1 1 0 NACHT domain VHP PF02209.19 NODE_64094_length_251_cov_100.685185_g56153_i0forward_frame_2 - 0.98 9.5 5.6 1.3 9.1 5.6 1.2 1 0 0 1 1 1 0 Villin headpiece domain DUF5109 PF17134.4 NODE_64092_length_251_cov_102.101852_g56151_i0forward_frame_2 - 0.15 12.0 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5109) Peptidase_C6 PF00851.18 NODE_64091_length_251_cov_106.125000_g56150_i0reverse_frame_2 - 0.041 12.8 0.3 0.048 12.6 0.3 1.1 1 0 0 1 1 1 0 Helper component proteinase PH_BEACH PF14844.6 NODE_64089_length_251_cov_119.152778_g56148_i0reverse_frame_3 - 0.063 13.4 0.2 0.075 13.1 0.2 1.2 1 0 0 1 1 1 0 PH domain associated with Beige/BEACH DUF937 PF06078.11 NODE_64086_length_251_cov_131.138889_g56145_i0forward_frame_3 - 0.045 14.4 0.1 0.072 13.7 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF937) cwf21 PF08312.12 NODE_64086_length_251_cov_131.138889_g56145_i0forward_frame_3 - 0.25 11.5 5.4 0.64 10.2 0.1 2.2 2 0 0 2 2 2 0 cwf21 domain TPD52 PF04201.15 NODE_64086_length_251_cov_131.138889_g56145_i0forward_frame_3 - 0.25 10.9 9.5 0.34 10.5 8.3 1.7 1 1 1 2 2 2 0 Tumour protein D52 family LZ_Tnp_IS66 PF13007.7 NODE_64086_length_251_cov_131.138889_g56145_i0forward_frame_3 - 0.52 11.1 3.5 1 10.2 3.3 1.7 1 1 0 1 1 1 0 Transposase C of IS166 homeodomain SSFA2_C PF14723.6 NODE_64080_length_251_cov_184.328704_g56139_i0forward_frame_3 - 0.062 13.2 0.0 0.068 13.1 0.0 1.0 1 0 0 1 1 1 0 Sperm-specific antigen 2 C-terminus SpaA PF17802.1 NODE_64075_length_251_cov_319.879630_g56134_i0reverse_frame_3 - 0.037 14.4 0.5 0.18 12.2 0.0 1.9 1 1 1 2 2 2 0 Prealbumin-like fold domain Cwf_Cwc_15 PF04889.12 NODE_64071_length_251_cov_1520.949074_g56130_i0reverse_frame_2 - 0.18 11.5 0.0 0.2 11.4 0.0 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein SAM_Exu PF18609.1 NODE_64064_length_252_cov_0.986175_g56123_i0reverse_frame_3 - 0.13 12.4 0.7 0.31 11.2 0.7 1.6 1 1 0 1 1 1 0 Exuperantia SAM-like domain DUF261 PF03196.13 NODE_64062_length_252_cov_1.009217_g56121_i0reverse_frame_3 - 0.027 14.6 0.9 0.032 14.3 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF261 TSGP1 PF07771.11 NODE_64061_length_252_cov_1.018433_g56120_i0reverse_frame_3 - 0.026 14.7 0.9 0.031 14.4 0.9 1.0 1 0 0 1 1 1 0 Tick salivary peptide group 1 Adeno_E3_14_5 PF04834.12 NODE_64060_length_252_cov_1.041475_g56119_i0forward_frame_2 - 0.051 14.1 0.0 0.069 13.7 0.0 1.3 1 0 0 1 1 1 0 Early E3 14.5 kDa protein DUF2358 PF10184.9 NODE_64058_length_252_cov_1.096774_g56117_i0reverse_frame_3 - 0.11 12.8 0.7 0.12 12.6 0.7 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2358) Pox_F17 PF04767.12 NODE_64055_length_252_cov_1.105991_g56114_i0reverse_frame_3 - 0.4 11.2 2.6 0.74 10.4 2.3 1.7 1 1 1 2 2 2 0 DNA-binding 11 kDa phosphoprotein Pex2_Pex12 PF04757.14 NODE_64054_length_252_cov_1.133641_g56113_i0reverse_frame_3 - 1.1e-06 28.5 0.1 1.1e-06 28.5 0.1 1.0 1 0 0 1 1 1 1 Pex2 / Pex12 amino terminal region CBAH PF02275.18 NODE_64054_length_252_cov_1.133641_g56113_i0reverse_frame_2 - 0.092 12.4 0.0 0.096 12.3 0.0 1.0 1 0 0 1 1 1 0 Linear amide C-N hydrolases, choloylglycine hydrolase family HTH_41 PF14502.6 NODE_64053_length_252_cov_1.152074_g56112_i0forward_frame_2 - 0.076 12.7 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF5567 PF17722.1 NODE_64051_length_252_cov_1.193548_g56110_i0forward_frame_2 - 0.082 12.8 0.4 0.074 12.9 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5567) FANCI_HD1 PF14679.6 NODE_64048_length_252_cov_1.281106_g56107_i0forward_frame_3 - 0.049 13.6 0.2 0.071 13.1 0.1 1.3 1 1 0 1 1 1 0 FANCI helical domain 1 DUF1765 PF08578.10 NODE_64046_length_252_cov_1.281106_g56105_i0reverse_frame_3 - 0.037 14.5 1.2 0.058 13.9 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1765) Endonuc-FokI_C PF09254.11 NODE_64046_length_252_cov_1.281106_g56105_i0forward_frame_2 - 0.1 11.9 0.0 0.1 11.8 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease FokI, C terminal TMPIT PF07851.13 NODE_64039_length_252_cov_1.377880_g56098_i0forward_frame_2 - 0.033 13.5 0.7 0.04 13.2 0.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Lig_chan PF00060.26 NODE_64034_length_252_cov_1.428571_g56093_i0forward_frame_2 - 0.26 11.1 1.5 0.35 10.7 1.5 1.2 1 0 0 1 1 1 0 Ligand-gated ion channel DUF327 PF03885.13 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_2 - 0.019 14.9 0.2 0.023 14.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF327) FANCI_S2 PF14676.6 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_2 - 0.044 14.1 0.4 0.095 13.0 0.4 1.5 1 1 0 1 1 1 0 FANCI solenoid 2 Nop14 PF04147.12 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_2 - 0.046 12.0 0.2 0.052 11.8 0.2 1.0 1 0 0 1 1 1 0 Nop14-like family RIX1 PF08167.12 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_2 - 0.057 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis G2F PF07474.12 NODE_64025_length_252_cov_1.543779_g56084_i0reverse_frame_3 - 0.14 11.9 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 G2F domain GlnD_UR_UTase PF08335.11 NODE_64015_length_252_cov_1.658986_g56074_i0forward_frame_3 - 0.027 14.6 1.9 0.03 14.4 1.9 1.1 1 0 0 1 1 1 0 GlnD PII-uridylyltransferase Fungal_TACC PF12709.7 NODE_64015_length_252_cov_1.658986_g56074_i0forward_frame_3 - 0.043 14.3 5.0 0.078 13.4 0.7 2.1 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins BCL_N PF04714.13 NODE_64015_length_252_cov_1.658986_g56074_i0forward_frame_3 - 0.13 12.4 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 BCL7, N-terminal conserver region Terpene_synth PF01397.21 NODE_64011_length_252_cov_1.746544_g56070_i0forward_frame_3 - 0.13 11.9 0.0 0.16 11.6 0.0 1.0 1 0 0 1 1 1 0 Terpene synthase, N-terminal domain Peripla_BP_7 PF18610.1 NODE_64010_length_252_cov_1.769585_g56069_i0reverse_frame_2 - 0.11 12.6 1.4 0.4 10.8 0.0 2.0 1 1 1 2 2 2 0 Periplasmic binding protein domain Lamprin PF06403.11 NODE_64007_length_252_cov_1.783410_g56066_i0reverse_frame_3 - 2.2 8.2 12.5 3.5 7.6 8.2 2.0 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_64007_length_252_cov_1.783410_g56066_i0reverse_frame_2 - 9.5 6.2 8.4 12 5.8 4.6 2.1 1 1 1 2 2 2 0 Lamprin RRF_GI PF12614.8 NODE_64006_length_252_cov_1.788018_g56065_i0forward_frame_3 - 0.028 14.6 2.1 0.037 14.2 2.1 1.2 1 0 0 1 1 1 0 Ribosome recycling factor PIG-P PF08510.12 NODE_64005_length_252_cov_1.806452_g56064_i0forward_frame_2 - 0.027 14.4 2.0 0.03 14.2 2.0 1.1 1 0 0 1 1 1 0 PIG-P RIH_assoc PF08454.11 NODE_64004_length_252_cov_1.820276_g56063_i0forward_frame_2 - 0.057 13.3 0.1 1.2 9.0 0.0 2.0 1 1 1 2 2 2 0 RyR and IP3R Homology associated Imm26 PF15428.6 NODE_64003_length_252_cov_1.829493_g56062_i0reverse_frame_2 - 0.083 13.1 0.4 0.1 12.8 0.4 1.3 1 1 0 1 1 1 0 Immunity protein 26 PGC7_Stella PF15549.6 NODE_64002_length_252_cov_1.838710_g56061_i0forward_frame_3 - 0.14 12.2 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain DUF4529 PF15032.6 NODE_63998_length_252_cov_1.866359_g56057_i0reverse_frame_3 - 0.099 11.7 0.1 0.11 11.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) FliS_cochap PF16522.5 NODE_63995_length_252_cov_1.884793_g56054_i0forward_frame_2 - 0.013 15.5 0.2 0.014 15.4 0.2 1.0 1 0 0 1 1 1 0 Flagellar FLiS export co-chaperone, HP1076 EF-hand_5 PF13202.6 NODE_63993_length_252_cov_1.917051_g56052_i0reverse_frame_2 - 0.072 12.6 0.7 0.072 12.6 0.7 1.6 2 0 0 2 2 2 0 EF hand p450 PF00067.22 NODE_63993_length_252_cov_1.917051_g56052_i0reverse_frame_2 - 0.15 10.8 3.1 0.16 10.7 3.1 1.0 1 0 0 1 1 1 0 Cytochrome P450 SAP PF02037.27 NODE_63992_length_252_cov_1.921659_g56051_i0reverse_frame_3 - 0.13 12.0 0.2 0.4 10.5 0.1 1.8 2 0 0 2 2 2 0 SAP domain DUF483 PF04467.12 NODE_63991_length_252_cov_1.949309_g56050_i0reverse_frame_3 - 0.15 12.0 1.0 0.18 11.8 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF483) Acetyltransf_1 PF00583.25 NODE_63989_length_252_cov_1.958525_g56048_i0forward_frame_3 - 0.038 14.2 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family DUF3013 PF11217.8 NODE_63989_length_252_cov_1.958525_g56048_i0forward_frame_3 - 0.12 12.3 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3013) RabGAP-TBC PF00566.18 NODE_63988_length_252_cov_2.000000_g56047_i0reverse_frame_3 - 0.038 13.6 0.1 0.043 13.5 0.1 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain DUF2661 PF10860.8 NODE_63987_length_252_cov_2.013825_g56046_i0forward_frame_3 - 0.057 13.5 0.0 0.082 13.0 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2661) UCH_C PF18031.1 NODE_63987_length_252_cov_2.013825_g56046_i0forward_frame_3 - 0.074 13.0 0.6 1.9 8.5 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolases LRR_adjacent PF08191.11 NODE_63986_length_252_cov_2.082949_g56045_i0reverse_frame_2 - 0.1 12.8 0.2 0.2 11.9 0.2 1.5 1 0 0 1 1 1 0 LRR adjacent WGR PF05406.15 NODE_63982_length_252_cov_2.110599_g56041_i0reverse_frame_2 - 1.4e-09 37.9 0.3 1.9e-09 37.4 0.3 1.2 1 0 0 1 1 1 1 WGR domain DUF5445 PF17520.2 NODE_63979_length_252_cov_2.161290_g56038_i0reverse_frame_2 - 8.4e-31 105.6 4.4 8.4e-31 105.6 4.4 1.5 2 0 0 2 2 2 1 Family of unknown function (DUF5445) zf-Nse PF11789.8 NODE_63976_length_252_cov_2.235023_g56035_i0forward_frame_3 - 0.016 15.0 0.3 0.022 14.6 0.3 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit STAG PF08514.11 NODE_63972_length_252_cov_2.442396_g56031_i0forward_frame_2 - 0.031 14.2 0.4 0.035 14.0 0.4 1.1 1 0 0 1 1 1 0 STAG domain PRANC PF09372.10 NODE_63971_length_252_cov_2.456221_g56030_i0forward_frame_3 - 0.063 13.6 0.3 0.078 13.3 0.3 1.1 1 0 0 1 1 1 0 PRANC domain MFS_1 PF07690.16 NODE_63970_length_252_cov_2.470046_g56029_i0reverse_frame_2 - 1.7e-10 40.3 9.1 1.8e-10 40.3 9.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_63970_length_252_cov_2.470046_g56029_i0reverse_frame_2 - 0.00029 19.8 4.0 0.0003 19.8 4.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter RIFIN PF02009.16 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.016 15.1 5.6 0.016 15.1 5.6 1.4 1 1 1 2 2 2 0 Rifin DUF5079 PF16882.5 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.058 13.3 0.8 0.058 13.3 0.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5079) DUF2417 PF10329.9 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.069 12.6 4.3 0.079 12.4 4.3 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF4501 PF14946.6 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.089 12.9 0.1 0.092 12.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) AveC_like PF17198.4 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.14 11.6 1.9 0.16 11.4 1.9 1.1 1 0 0 1 1 1 0 Spirocyclase AveC-like EphA2_TM PF14575.6 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.27 12.1 1.3 4.1 8.4 0.0 2.1 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain COPI_assoc PF08507.10 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 4 7.5 10.5 16 5.6 10.1 1.9 1 1 1 2 2 2 0 COPI associated protein Herpes_UL3 PF03369.13 NODE_63968_length_252_cov_2.543779_g56027_i0reverse_frame_3 - 0.056 14.0 0.1 0.071 13.7 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus UL3 protein BMFP PF04380.13 NODE_63968_length_252_cov_2.543779_g56027_i0reverse_frame_2 - 5.9e-07 29.9 0.1 7.4e-07 29.6 0.1 1.1 1 0 0 1 1 1 1 Membrane fusogenic activity ApoC-I PF04691.12 NODE_63968_length_252_cov_2.543779_g56027_i0reverse_frame_2 - 0.021 14.7 0.1 0.036 14.0 0.1 1.4 1 0 0 1 1 1 0 Apolipoprotein C-I (ApoC-1) Bac_RepA_C PF18008.1 NODE_63967_length_252_cov_2.548387_g56026_i0forward_frame_2 - 0.044 14.1 0.2 0.056 13.8 0.2 1.1 1 0 0 1 1 1 0 Replication initiator protein A C-terminal domain HTH_49 PF18010.1 NODE_63962_length_252_cov_2.645161_g56021_i0forward_frame_3 - 0.16 11.9 1.7 0.46 10.4 0.1 2.3 3 0 0 3 3 3 0 Cry35Ab1 HTH C-terminal domain EF-hand_1 PF00036.32 NODE_63955_length_252_cov_2.792627_g56014_i0forward_frame_3 - 0.00024 20.4 0.4 0.045 13.3 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_63955_length_252_cov_2.792627_g56014_i0forward_frame_3 - 0.0012 18.7 0.1 0.086 12.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_63955_length_252_cov_2.792627_g56014_i0forward_frame_3 - 0.0033 17.2 0.4 0.58 10.2 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 NODE_63955_length_252_cov_2.792627_g56014_i0forward_frame_3 - 0.014 15.9 0.2 0.071 13.6 0.1 1.9 1 1 1 2 2 2 0 EF-hand domain pair Aminotran_3 PF00202.21 NODE_63944_length_252_cov_3.940092_g56003_i0reverse_frame_2 - 3.2e-23 82.1 0.0 3.7e-23 81.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Col_cuticle_N PF01484.17 NODE_63931_length_252_cov_36.686636_g55990_i0forward_frame_2 - 0.61 10.2 1.6 0.9 9.6 0.1 1.9 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain ParBc PF02195.18 NODE_63930_length_252_cov_39.801843_g55989_i0reverse_frame_2 - 0.096 13.0 0.3 6.7 7.1 0.1 2.1 2 0 0 2 2 2 0 ParB-like nuclease domain Peptidase_S28 PF05577.12 NODE_63928_length_252_cov_41.115207_g55987_i0forward_frame_3 - 0.016 14.0 0.2 0.016 14.0 0.2 1.0 1 0 0 1 1 1 0 Serine carboxypeptidase S28 Protocadherin PF08374.11 NODE_63924_length_252_cov_46.783410_g55983_i0forward_frame_2 - 0.12 12.3 0.2 0.12 12.4 0.2 1.1 1 0 0 1 1 1 0 Protocadherin KCNQ2_u3 PF16642.5 NODE_63919_length_252_cov_51.594470_g55978_i0reverse_frame_3 - 0.28 12.2 1.9 0.35 11.9 1.9 1.2 1 0 0 1 1 1 0 Unstructured region on Potassium channel subunit alpha KvLQT2 Bap31_Bap29_C PF18035.1 NODE_63919_length_252_cov_51.594470_g55978_i0reverse_frame_3 - 0.34 10.9 10.8 1.8 8.7 10.8 2.1 1 1 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain DUF2880 PF11082.8 NODE_63918_length_252_cov_54.069124_g55977_i0reverse_frame_3 - 0.19 12.1 0.2 0.29 11.5 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2880) IGFL PF14653.6 NODE_63918_length_252_cov_54.069124_g55977_i0forward_frame_3 - 0.03 14.3 0.2 0.034 14.1 0.2 1.1 1 0 0 1 1 1 0 Insulin growth factor-like family Cys_rich_VLP PF14194.6 NODE_63916_length_252_cov_56.211982_g55975_i0forward_frame_3 - 0.12 12.5 0.9 0.16 12.1 0.9 1.3 1 0 0 1 1 1 0 Cysteine-rich VLP PBP1_TM PF14812.6 NODE_63914_length_252_cov_59.147465_g55973_i0reverse_frame_2 - 0.85 10.0 7.5 0.27 11.6 5.2 1.4 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal TPX2_importin PF12214.8 NODE_63908_length_252_cov_67.331797_g55967_i0forward_frame_2 - 0.00039 20.7 0.0 0.00039 20.7 0.0 1.1 1 0 0 1 1 1 1 Cell cycle regulated microtubule associated protein Imm30 PF15565.6 NODE_63907_length_252_cov_68.894009_g55966_i0forward_frame_3 - 0.1 12.7 0.2 0.16 12.1 0.2 1.3 1 1 0 1 1 1 0 Immunity protein 30 Phageshock_PspG PF09583.10 NODE_63904_length_252_cov_72.728111_g55963_i0reverse_frame_3 - 0.021 15.1 0.5 0.032 14.5 0.5 1.2 1 0 0 1 1 1 0 Phage shock protein G (Phageshock_PspG) YbhQ PF11076.8 NODE_63904_length_252_cov_72.728111_g55963_i0reverse_frame_3 - 0.081 12.9 0.1 0.098 12.7 0.1 1.1 1 0 0 1 1 1 0 Putative inner membrane protein YbhQ ArAE_1 PF06081.11 NODE_63903_length_252_cov_74.981567_g55962_i0reverse_frame_2 - 0.021 15.0 0.0 0.025 14.7 0.0 1.0 1 0 0 1 1 1 0 Aromatic acid exporter family member 1 RFX5_DNA_bdg PF14621.6 NODE_63902_length_252_cov_76.474654_g55961_i0reverse_frame_3 - 0.46 10.2 6.0 0.56 9.9 6.0 1.0 1 0 0 1 1 1 0 RFX5 DNA-binding domain Sod_Fe_N PF00081.22 NODE_63901_length_252_cov_77.129032_g55960_i0reverse_frame_3 - 0.028 14.9 0.4 0.036 14.5 0.4 1.2 1 0 0 1 1 1 0 Iron/manganese superoxide dismutases, alpha-hairpin domain Vac_Fusion PF02346.16 NODE_63897_length_252_cov_88.829493_g55956_i0reverse_frame_2 - 0.051 13.2 0.2 0.11 12.1 0.0 1.7 2 0 0 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 ECSCR PF15820.5 NODE_63897_length_252_cov_88.829493_g55956_i0reverse_frame_2 - 0.076 12.8 0.1 0.096 12.5 0.1 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Ank_5 PF13857.6 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 1.9e-11 44.0 0.0 3e-06 27.4 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 4.2e-10 40.1 0.0 5.6e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 6.3e-07 29.8 0.0 9.7e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 1.3e-06 28.5 0.0 0.0065 16.9 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 0.00027 21.1 0.0 0.0012 19.2 0.0 2.0 3 0 0 3 3 3 1 Ankyrin repeat UPF0302 PF08864.10 NODE_63889_length_252_cov_131.728111_g55948_i0forward_frame_2 - 0.042 13.9 0.3 0.052 13.6 0.3 1.1 1 0 0 1 1 1 0 UPF0302 domain PPR_2 PF13041.6 NODE_63888_length_252_cov_136.410138_g55947_i0forward_frame_3 - 0.0002 21.5 0.0 0.00029 21.0 0.0 1.2 1 0 0 1 1 1 1 PPR repeat family PPR_long PF17177.4 NODE_63888_length_252_cov_136.410138_g55947_i0forward_frame_3 - 0.0011 18.4 0.0 0.0012 18.3 0.0 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP DnaB_C PF03796.15 NODE_63885_length_252_cov_248.115207_g55944_i0reverse_frame_3 - 0.056 12.8 0.1 0.064 12.6 0.1 1.1 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain SBF2 PF12335.8 NODE_63883_length_252_cov_276.179724_g55942_i0reverse_frame_2 - 0.033 13.8 0.0 0.037 13.6 0.0 1.1 1 0 0 1 1 1 0 Myotubularin protein SNARE PF05739.19 NODE_63879_length_252_cov_3130.133641_g55938_i0forward_frame_2 - 0.15 12.1 0.2 0.22 11.6 0.2 1.2 1 0 0 1 1 1 0 SNARE domain AXE1 PF05448.12 NODE_63877_length_252_cov_4346.142857_g55936_i0reverse_frame_3 - 0.19 10.4 0.0 0.22 10.2 0.0 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Chloroa_b-bind PF00504.21 NODE_63877_length_252_cov_4346.142857_g55936_i0forward_frame_3 - 6.2e-08 33.3 0.3 6.3e-08 33.3 0.3 1.3 1 1 0 1 1 1 1 Chlorophyll A-B binding protein TAF1_subA PF14929.6 ORF99627 - 0.058 12.8 0.0 0.065 12.6 0.0 1.0 1 0 0 1 1 1 0 TAF RNA Polymerase I subunit A DUF4579 PF15158.6 ORF99402 - 0.018 14.8 1.5 0.021 14.6 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) DUF1467 PF07330.12 ORF98921 - 0.087 12.8 0.0 0.09 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1467) Mucin PF01456.17 ORF98919 - 0.022 14.8 7.5 0.023 14.7 7.4 1.2 1 1 0 1 1 1 0 Mucin-like glycoprotein Hira PF07569.11 ORF98919 - 0.11 12.2 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 TUP1-like enhancer of split NHR2 PF08788.11 ORF98856 - 0.015 15.0 0.6 0.028 14.2 0.6 1.5 1 0 0 1 1 1 0 NHR2 domain like Xlink PF00193.17 ORF98231 - 0.00047 20.5 0.0 0.00049 20.4 0.0 1.0 1 0 0 1 1 1 1 Extracellular link domain Fer4_2 PF12797.7 ORF95241 - 0.23 11.6 0.7 0.23 11.6 0.7 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain DUF1189 PF06691.11 ORF94912 - 0.017 14.7 2.2 0.019 14.6 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) CxC4 PF18717.1 ORF94827 - 0.064 13.1 2.4 0.08 12.8 2.4 1.1 1 0 0 1 1 1 0 CxC4 like cysteine cluster associated with KDZ transposases CvfB_WH PF17783.1 ORF93029 - 0.031 14.1 0.9 1.5 8.7 0.0 2.5 2 1 1 3 3 3 0 CvfB-like winged helix domain Rhomboid PF01694.22 ORF92699 - 0.00048 20.1 4.8 0.00056 19.9 4.8 1.0 1 0 0 1 1 1 1 Rhomboid family DUF1232 PF06803.12 ORF926 - 0.032 14.0 0.1 0.046 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1232) adh_short PF00106.25 ORF92242 - 4e-07 29.7 0.0 4.1e-07 29.6 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF92242 - 0.0026 17.4 0.0 0.0028 17.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase STATa_Ig PF18214.1 ORF92016 - 0.13 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 STATa Immunoglobulin-like domain Mito_carr PF00153.27 ORF91876 - 4.2e-12 45.8 0.4 5.6e-12 45.4 0.1 1.4 2 0 0 2 2 2 1 Mitochondrial carrier protein SUI1 PF01253.22 ORF91766 - 3.1e-11 43.6 0.3 5.3e-11 42.9 0.3 1.4 1 0 0 1 1 1 1 Translation initiation factor SUI1 Ntox28 PF15605.6 ORF91574 - 0.026 14.7 0.5 0.079 13.2 0.2 1.7 1 1 1 2 2 2 0 Bacterial toxin 28 CdiA_C PF18451.1 ORF91574 - 0.045 14.0 1.7 0.06 13.6 1.7 1.3 1 1 0 1 1 1 0 Contact-dependent growth inhibition CdiA C-terminal domain Aminotran_1_2 PF00155.21 ORF91426 - 2.5e-12 46.7 0.1 2.7e-12 46.5 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II N1221 PF07923.13 ORF90140 - 0.16 11.1 0.0 0.18 11.0 0.0 1.0 1 0 0 1 1 1 0 N1221-like protein GH3 PF03321.13 ORF89552 - 0.11 11.3 0.1 0.11 11.3 0.1 1.0 1 0 0 1 1 1 0 GH3 auxin-responsive promoter E3_UbLigase_R4 PF13764.6 ORF89243 - 0.0083 14.4 0.0 0.009 14.2 0.0 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 Adipogenin PF15202.6 ORF88429 - 0.065 13.3 0.5 2.1 8.4 0.4 2.1 1 1 1 2 2 2 0 Adipogenin Calcyon PF06387.11 ORF88154 - 0.14 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) NUDIX_4 PF14815.6 ORF87696 - 0.097 12.7 0.2 0.097 12.7 0.2 1.2 1 0 0 1 1 1 0 NUDIX domain zf-HYPF PF07503.12 ORF87199 - 0.02 14.7 0.4 0.23 11.3 0.1 2.2 2 0 0 2 2 2 0 HypF finger NEL PF14496.6 ORF87186 - 0.15 11.5 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 C-terminal novel E3 ligase, LRR-interacting Ins145_P3_rec PF08709.11 ORF8688 - 0.17 11.0 0.0 0.22 10.7 0.0 1.1 1 0 0 1 1 1 0 Inositol 1,4,5-trisphosphate/ryanodine receptor KLRAQ PF10205.9 ORF86240 - 0.06 13.6 1.7 0.06 13.6 1.7 2.1 2 0 0 2 2 2 0 Predicted coiled-coil domain-containing protein Atrophin-1 PF03154.15 ORF86200 - 0.038 12.3 3.5 0.039 12.3 3.5 1.0 1 0 0 1 1 1 0 Atrophin-1 family TP_methylase PF00590.20 ORF86023 - 0.1 12.5 0.2 0.11 12.4 0.2 1.1 1 0 0 1 1 1 0 Tetrapyrrole (Corrin/Porphyrin) Methylases Med20 PF08612.11 ORF85471 - 0.019 14.3 0.0 0.022 14.1 0.0 1.0 1 0 0 1 1 1 0 TATA-binding related factor (TRF) of subunit 20 of Mediator complex DUF5305 PF17231.2 ORF84973 - 0.084 12.3 1.6 0.092 12.1 1.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF3357 PF11837.8 ORF84973 - 0.11 13.0 2.0 0.12 12.8 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) AJAP1_PANP_C PF15298.6 ORF84973 - 0.39 10.9 12.1 0.43 10.8 12.1 1.1 1 0 0 1 1 1 0 AJAP1/PANP C-terminus L_lactis_RepB_C PF06430.12 ORF84900 - 0.0036 17.3 0.3 0.0045 17.0 0.3 1.1 1 0 0 1 1 1 1 Lactococcus lactis RepB C-terminus ARGLU PF15346.6 ORF84900 - 0.0053 16.6 19.2 0.0086 16.0 19.2 1.3 1 1 0 1 1 1 1 Arginine and glutamate-rich 1 HSCB_C PF07743.13 ORF84900 - 0.33 11.5 7.4 0.41 11.2 7.4 1.3 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain CHAD PF05235.14 ORF84900 - 0.64 9.9 7.7 1.5 8.7 7.7 1.6 1 1 0 1 1 1 0 CHAD domain VIT1 PF01988.19 ORF84900 - 0.82 9.5 2.7 0.88 9.4 2.7 1.0 1 0 0 1 1 1 0 VIT family SPATA19 PF15212.6 ORF84815 - 0.15 12.3 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial DMPK_coil PF08826.10 ORF84454 - 0.078 13.1 10.1 0.35 11.0 2.1 2.8 2 1 1 3 3 3 0 DMPK coiled coil domain like TTKRSYEDQ PF10212.9 ORF84454 - 0.42 9.5 6.4 0.44 9.5 6.4 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein KLRAQ PF10205.9 ORF84454 - 0.61 10.4 8.3 3.7 7.8 8.3 2.0 1 1 0 1 1 1 0 Predicted coiled-coil domain-containing protein DUF5475 PF17569.2 ORF83845 - 0.036 14.4 0.8 0.057 13.7 0.8 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5475) DUF765 PF05570.11 ORF82603 - 0.11 12.7 0.8 0.68 10.2 0.8 2.1 2 0 0 2 2 2 0 Circovirus protein of unknown function (DUF765) Virul_Fac PF10139.9 ORF82603 - 0.16 10.2 0.2 0.17 10.1 0.2 1.0 1 0 0 1 1 1 0 Putative bacterial virulence factor SinI PF08671.10 ORF80290 - 0.059 13.2 0.0 0.094 12.5 0.0 1.3 1 0 0 1 1 1 0 Anti-repressor SinI Xlink PF00193.17 ORF80117 - 0.00047 20.5 0.0 0.00049 20.4 0.0 1.0 1 0 0 1 1 1 1 Extracellular link domain DUF4522 PF15022.6 ORF80099 - 0.029 14.6 0.1 0.032 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) GerPB PF10803.8 ORF79469 - 0.042 13.9 0.1 0.094 12.8 0.0 1.6 2 0 0 2 2 2 0 Spore germination GerPB Laps PF10169.9 ORF79401 - 0.0083 16.7 0.0 0.01 16.4 0.0 1.2 1 0 0 1 1 1 1 Learning-associated protein zf-CCHC_5 PF14787.6 ORF79401 - 0.15 11.8 0.1 0.66 9.7 0.0 1.9 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger SRAP PF02586.14 ORF79030 - 0.07 12.7 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 SOS response associated peptidase (SRAP) RRP14 PF15459.6 ORF77913 - 0.27 11.9 7.2 0.11 13.1 4.9 1.6 1 1 1 2 2 2 0 60S ribosome biogenesis protein Rrp14 PH PF00169.29 ORF7785 - 3.6e-05 24.2 0.0 4e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF7785 - 0.016 15.5 0.0 0.018 15.3 0.0 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain DUF4871 PF16167.5 ORF77837 - 0.094 12.7 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) ShlB PF03865.13 ORF77293 - 0.03 13.8 0.7 0.034 13.6 0.7 1.1 1 0 0 1 1 1 0 Haemolysin secretion/activation protein ShlB/FhaC/HecB ANAPC1 PF12859.7 ORF77293 - 0.11 13.1 0.3 0.11 13.0 0.3 1.0 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 DUF5321 PF17254.2 ORF76916 - 0.17 11.3 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5321) Semenogelin PF05474.11 ORF76873 - 0.032 12.8 0.1 0.036 12.6 0.1 1.0 1 0 0 1 1 1 0 Semenogelin CCDC14 PF15254.6 ORF76873 - 0.27 9.8 0.4 0.26 9.9 0.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 Membralin PF09746.9 ORF76714 - 0.00063 18.9 1.3 0.00068 18.8 1.3 1.1 1 0 0 1 1 1 1 Tumour-associated protein DUF4492 PF14899.6 ORF76714 - 0.19 11.7 4.8 0.18 11.8 1.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4492) DUF3810 PF12725.7 ORF76714 - 0.34 10.2 0.9 0.39 10.0 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF2207 PF09972.9 ORF76714 - 0.97 8.1 3.8 0.96 8.1 3.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Nup153 PF08604.10 ORF76711 - 0.17 10.6 3.5 0.19 10.5 3.5 1.1 1 0 0 1 1 1 0 Nucleoporin Nup153-like CCDC85 PF10226.9 ORF75913 - 0.0078 15.9 1.6 0.0086 15.8 1.6 1.1 1 0 0 1 1 1 1 CCDC85 family DUF1465 PF07323.12 ORF75913 - 0.021 14.7 1.6 0.024 14.5 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) SapB_1 PF05184.15 ORF75913 - 0.91 9.6 3.7 0.88 9.6 0.6 2.3 2 0 0 2 2 2 0 Saposin-like type B, region 1 Adenine_glyco PF03352.13 ORF75544 - 7.7e-21 74.7 0.0 8.9e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase Aminotran_1_2 PF00155.21 ORF75081 - 0.056 12.6 0.0 0.059 12.5 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II DUF2591 PF10765.9 ORF74669 - 0.0038 17.5 0.0 0.0041 17.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2591) Nha1_C PF08619.10 ORF74327 - 0.59 9.3 13.6 0.58 9.3 13.6 1.1 1 0 0 1 1 1 0 Alkali metal cation/H+ antiporter Nha1 C terminus DUF4516 PF14990.6 ORF74143 - 2.4 8.0 5.5 2.3 8.0 0.1 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4516) GerD PF17898.1 ORF73672 - 0.021 14.7 1.1 0.024 14.6 1.1 1.1 1 0 0 1 1 1 0 Spore germination GerD central core domain DUF3073 PF11273.8 ORF73672 - 0.13 13.0 1.3 0.17 12.7 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) zf_C2H2_6 PF18450.1 ORF72451 - 5.3 6.8 8.7 3.3 7.5 1.7 2.5 3 0 0 3 3 3 0 Zinc Finger domain TRM13 PF05206.14 ORF71876 - 0.42 10.1 2.1 0.45 10.0 2.1 1.1 1 0 0 1 1 1 0 Methyltransferase TRM13 Mito_carr PF00153.27 ORF71350 - 4.2e-12 45.8 0.4 5.6e-12 45.4 0.1 1.4 2 0 0 2 2 2 1 Mitochondrial carrier protein DUF5579 PF17742.1 ORF71073 - 0.077 12.5 1.6 2.6 7.6 0.4 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5579) BCL_N PF04714.13 ORF70697 - 0.59 10.2 16.9 0.31 11.1 10.7 2.8 2 1 0 2 2 2 0 BCL7, N-terminal conserver region RICH PF05062.12 ORF70410 - 0.075 13.4 2.3 0.079 13.3 1.4 1.5 1 1 0 1 1 1 0 RICH domain ACP_PD PF04336.12 ORF70410 - 0.083 13.3 0.1 0.11 12.9 0.1 1.2 1 0 0 1 1 1 0 Acyl carrier protein phosphodiesterase GCV_H PF01597.19 ORF70410 - 0.098 12.5 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Glycine cleavage H-protein DUF3523 PF12037.8 ORF70283 - 0.032 13.6 0.1 0.036 13.4 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3523) PTEN_C2 PF10409.9 ORF69822 - 0.00031 20.5 0.1 0.00038 20.2 0.1 1.3 1 1 0 1 1 1 1 C2 domain of PTEN tumour-suppressor protein TrwB_AAD_bind PF10412.9 ORF69448 - 0.16 10.9 0.0 0.18 10.7 0.0 1.0 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Cobl PF09469.10 ORF68318 - 0.053 13.8 0.6 0.071 13.4 0.5 1.5 1 1 0 1 1 1 0 Cordon-bleu ubiquitin-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks291.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks291.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks291.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks291.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:05:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TMEM191C PF15194.6 ORF67289 - 0.11 12.6 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 TMEM191C family Anp1 PF03452.14 ORF67270 - 0.055 12.9 0.0 0.056 12.8 0.0 1.0 1 0 0 1 1 1 0 Anp1 MCU PF04678.13 ORF66756 - 0.16 12.0 3.1 0.18 11.9 3.1 1.0 1 0 0 1 1 1 0 Mitochondrial calcium uniporter PGF-CTERM PF18204.1 ORF66756 - 0.33 11.0 3.9 0.51 10.4 3.9 1.3 1 0 0 1 1 1 0 PGF-CTERM motif ATP-synt_DE PF00401.20 ORF66756 - 0.69 10.2 18.2 0.25 11.6 5.2 2.5 1 1 1 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CAAX_1 PF15895.5 ORF6654 - 0.03 14.2 7.7 0.035 14.0 7.7 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 SPATA19 PF15212.6 ORF6593 - 0.15 12.3 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial DUF4293 PF14126.6 ORF65904 - 0.27 11.5 2.2 0.57 10.4 0.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4293) Romo1 PF10247.9 ORF65807 - 0.00029 21.1 4.4 0.00041 20.6 4.4 1.3 1 0 0 1 1 1 1 Reactive mitochondrial oxygen species modulator 1 DUF2207 PF09972.9 ORF65580 - 0.085 11.6 0.8 0.098 11.4 0.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) T4-Gluco-transf PF09198.10 ORF65311 - 0.053 13.1 0.9 0.082 12.5 0.0 1.8 2 0 0 2 2 2 0 Bacteriophage T4 beta-glucosyltransferase GAS2 PF02187.17 ORF65266 - 1e-06 28.7 0.0 1.3e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain NTF-like PF14540.6 ORF64560 - 0.17 11.6 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyltransferase-like MlaC PF05494.12 ORF64169 - 0.2 11.4 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 MlaC protein DUF2284 PF10050.9 ORF63851 - 0.71 9.6 4.1 0.87 9.3 4.1 1.1 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) SecE PF00584.20 ORF6337 - 8.6e-14 51.2 0.0 1e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Pox_I5 PF04713.12 ORF62785 - 0.038 14.0 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 Poxvirus protein I5 DUF3450 PF11932.8 ORF62445 - 4e-05 23.0 6.0 4.1e-05 23.0 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) BRE1 PF08647.11 ORF62445 - 4.1e-05 23.6 6.7 4.1e-05 23.6 6.7 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Spc7 PF08317.11 ORF62445 - 0.00062 18.7 5.9 0.00072 18.5 5.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 ORF62445 - 0.00081 19.9 7.4 0.00096 19.7 7.4 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region Tropomyosin PF00261.20 ORF62445 - 0.0015 18.0 4.8 0.0017 17.8 4.8 1.1 1 0 0 1 1 1 1 Tropomyosin DUF4164 PF13747.6 ORF62445 - 0.0017 18.6 5.1 0.0021 18.3 4.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) Seryl_tRNA_N PF02403.22 ORF62445 - 0.0023 18.1 6.4 0.0027 17.9 6.4 1.1 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain TMF_TATA_bd PF12325.8 ORF62445 - 0.0054 16.9 6.4 0.0056 16.9 6.4 1.0 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Muted PF14942.6 ORF62445 - 0.0063 16.9 5.1 0.0066 16.8 5.1 1.0 1 0 0 1 1 1 1 Organelle biogenesis, Muted-like protein CEP209_CC5 PF16574.5 ORF62445 - 0.0076 16.4 3.4 0.0086 16.2 3.4 1.2 1 0 0 1 1 1 1 Coiled-coil region of centrosome protein CE290 DUF3782 PF12644.7 ORF62445 - 0.0078 16.3 1.8 0.013 15.6 1.6 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3782) JIP_LZII PF16471.5 ORF62445 - 0.0092 16.1 4.6 0.0092 16.1 4.6 1.8 1 1 1 2 2 2 1 JNK-interacting protein leucine zipper II DHR10 PF18595.1 ORF62445 - 0.0096 16.0 5.6 0.011 15.8 5.6 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain IFT57 PF10498.9 ORF62445 - 0.0097 14.9 4.5 0.0094 15.0 4.5 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Atg14 PF10186.9 ORF62445 - 0.014 14.5 4.0 0.015 14.4 4.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Tropomyosin_1 PF12718.7 ORF62445 - 0.015 15.5 6.3 0.018 15.2 6.3 1.1 1 0 0 1 1 1 0 Tropomyosin like DASH_Dad1 PF08649.10 ORF62445 - 0.015 15.4 4.1 0.04 14.1 2.1 2.5 1 1 1 2 2 2 0 DASH complex subunit Dad1 FmiP_Thoc5 PF09766.9 ORF62445 - 0.017 14.5 3.9 0.019 14.3 3.9 1.1 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 HMMR_N PF15905.5 ORF62445 - 0.02 14.4 6.2 0.02 14.4 6.2 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal FapA PF03961.13 ORF62445 - 0.02 13.5 5.3 0.022 13.4 5.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A COG2 PF06148.11 ORF62445 - 0.022 14.8 1.7 0.03 14.4 1.7 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF1664 PF07889.12 ORF62445 - 0.023 14.7 4.2 0.58 10.2 1.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 ORF62445 - 0.027 14.9 1.5 0.036 14.5 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) PI3K_P85_iSH2 PF16454.5 ORF62445 - 0.043 13.4 7.2 0.071 12.7 6.0 1.6 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain NPV_P10 PF05531.12 ORF62445 - 0.046 14.2 4.6 0.067 13.7 4.6 1.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Hormone_1 PF00103.20 ORF62445 - 0.047 13.4 1.2 0.053 13.3 1.2 1.1 1 0 0 1 1 1 0 Somatotropin hormone family ABC_tran_CTD PF16326.5 ORF62445 - 0.054 13.7 8.5 0.093 13.0 8.5 1.5 1 1 0 1 1 1 0 ABC transporter C-terminal domain Allexi_40kDa PF05549.11 ORF62445 - 0.081 12.4 1.7 0.085 12.4 1.7 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein THOC7 PF05615.13 ORF62445 - 0.081 13.2 8.2 0.16 12.2 8.2 1.6 1 1 0 1 1 1 0 Tho complex subunit 7 FemAB PF02388.16 ORF62445 - 0.085 11.7 3.4 0.097 11.5 3.4 1.0 1 0 0 1 1 1 0 FemAB family CLZ PF16526.5 ORF62445 - 0.086 13.2 5.4 0.33 11.3 3.1 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF1515 PF07439.11 ORF62445 - 0.1 12.6 0.5 0.13 12.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) Prefoldin PF02996.17 ORF62445 - 0.12 12.3 8.4 0.25 11.3 3.7 2.0 1 1 1 2 2 2 0 Prefoldin subunit Syntaxin-6_N PF09177.11 ORF62445 - 0.16 12.5 4.2 0.38 11.3 4.1 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF62445 - 0.18 11.6 4.9 0.23 11.3 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) TMPIT PF07851.13 ORF62445 - 0.19 11.0 4.8 0.2 10.9 4.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein BST2 PF16716.5 ORF62445 - 0.23 12.1 6.1 0.38 11.4 4.1 1.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 HAUS6_N PF14661.6 ORF62445 - 0.33 10.5 3.8 0.37 10.3 3.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus YabA PF06156.13 ORF62445 - 0.38 11.4 4.7 0.49 11.1 4.7 1.1 1 0 0 1 1 1 0 Initiation control protein YabA Spc24 PF08286.11 ORF62445 - 0.6 10.4 8.3 1.5 9.1 8.3 1.7 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 XhlA PF10779.9 ORF62445 - 0.9 9.8 6.4 1.7 8.9 6.2 1.6 1 1 0 1 1 1 0 Haemolysin XhlA DivIC PF04977.15 ORF62445 - 1.8 8.4 7.6 3.9 7.3 7.6 1.7 1 1 0 1 1 1 0 Septum formation initiator DUF4199 PF13858.6 ORF62445 - 2.5 8.5 4.8 2.9 8.3 4.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Zap1_zf2 PF18217.1 ORF62435 - 0.14 12.2 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Zap1 zinc finger 2 DUF2826 PF11442.8 ORF62362 - 0.018 14.9 0.4 0.018 14.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2826) zinc-ribbons_6 PF07191.12 ORF62158 - 1.5e-28 98.6 6.9 1.7e-28 98.4 6.9 1.0 1 0 0 1 1 1 1 zinc-ribbons TF_Zn_Ribbon PF08271.12 ORF62158 - 0.00017 21.0 0.3 0.00017 21.0 0.3 2.6 1 1 1 2 2 2 1 TFIIB zinc-binding DZR PF12773.7 ORF62158 - 0.0016 18.4 10.4 0.0058 16.6 10.4 1.9 1 1 0 1 1 1 1 Double zinc ribbon PolC_DP2 PF03833.13 ORF62158 - 0.0079 14.1 2.4 0.0076 14.2 2.4 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 Auto_anti-p27 PF06677.12 ORF62158 - 0.013 15.6 8.7 0.063 13.4 1.1 2.2 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_4 PF13717.6 ORF62158 - 0.014 15.3 9.5 7.7 6.5 4.6 3.6 2 1 0 2 2 2 0 zinc-ribbon domain Ribosomal_L32p PF01783.23 ORF62158 - 0.034 14.4 0.7 0.034 14.4 0.7 2.2 1 1 1 2 2 2 0 Ribosomal L32p protein family DiS_P_DiS PF06750.13 ORF62158 - 0.053 13.6 9.7 0.32 11.2 0.1 2.9 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain zf-RRPl_C4 PF17026.5 ORF62158 - 0.055 13.6 1.4 0.064 13.4 1.4 1.2 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type HypA PF01155.19 ORF62158 - 0.06 13.4 8.1 0.15 12.1 1.9 2.1 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Elf1 PF05129.13 ORF62158 - 0.14 12.2 6.3 0.55 10.3 6.4 2.1 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Glutaredoxin PF00462.24 ORF62158 - 0.18 12.1 1.6 1 9.6 0.5 2.2 2 0 0 2 2 2 0 Glutaredoxin T4_baseplate PF12322.8 ORF62158 - 0.23 10.9 0.8 0.77 9.2 0.1 1.8 2 0 0 2 2 2 0 T4 bacteriophage base plate protein Med27 PF11571.8 ORF62158 - 0.45 10.9 6.8 0.94 9.9 2.3 2.1 1 1 1 2 2 2 0 Mediator complex subunit 27 zf-ribbon_3 PF13248.6 ORF62158 - 0.46 10.0 13.5 0.15 11.5 2.5 3.6 2 1 1 3 3 3 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 ORF62158 - 0.63 10.0 12.4 2.2 8.3 3.8 3.5 1 1 2 3 3 3 0 SprT-like zinc ribbon domain Ribosomal_S27e PF01667.17 ORF62158 - 0.64 9.8 6.0 0.59 9.9 1.0 2.3 1 1 1 2 2 2 0 Ribosomal protein S27 DNA_ligase_ZBD PF03119.16 ORF62158 - 0.68 10.0 11.5 0.42 10.7 0.6 2.7 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain DNA_RNApol_7kD PF03604.13 ORF62158 - 0.97 9.2 8.1 0.43 10.3 1.1 2.8 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.10 ORF62158 - 1.2 9.3 16.4 6.3 7.0 9.8 3.2 2 2 1 3 3 3 0 Zinc ribbon domain RecR PF02132.15 ORF62158 - 1.5 8.4 7.6 14 5.3 4.4 2.3 1 1 1 2 2 2 0 RecR protein Trm112p PF03966.16 ORF62158 - 2.1 9.0 5.0 11 6.6 0.1 2.5 2 1 1 3 3 3 0 Trm112p-like protein DUF35_N PF12172.8 ORF62158 - 4.1 7.4 12.7 1.8 8.5 3.5 3.2 3 1 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-NADH-PPase PF09297.11 ORF62158 - 8.2 6.2 12.6 0.97 9.2 0.2 3.6 4 0 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain zf-CCCH PF00642.24 ORF61982 - 2e-05 24.4 0.4 3.7e-05 23.5 0.4 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) SPAR_C PF11881.8 ORF61807 - 0.045 13.7 1.1 0.051 13.5 1.1 1.0 1 0 0 1 1 1 0 C-terminal domain of SPAR protein HECW1_helix PF18436.1 ORF6149 - 0.045 13.9 0.4 4.1 7.6 0.0 2.1 1 1 1 2 2 2 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 RRM_1 PF00076.22 ORF61362 - 0.066 13.0 0.0 0.24 11.3 0.0 1.8 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LEP503 PF15221.6 ORF60321 - 0.053 13.9 0.0 0.068 13.5 0.0 1.2 1 0 0 1 1 1 0 Lens epithelial cell protein LEP503 Spore_GerAC PF05504.11 ORF58959 - 0.025 14.8 0.5 0.028 14.6 0.5 1.1 1 0 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal DUF3114 PF11311.8 ORF58959 - 0.054 13.0 0.1 0.058 12.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3114) Gemini_AL3 PF01407.17 ORF58358 - 0.019 14.8 0.3 0.019 14.8 0.3 1.1 1 0 0 1 1 1 0 Geminivirus AL3 protein FPL PF09758.9 ORF58358 - 0.02 14.9 1.0 0.022 14.8 1.0 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein DUF5415 PF17436.2 ORF58358 - 0.11 12.6 0.9 1.4 9.0 0.1 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5415) APA3_viroporin PF11289.8 ORF57994 - 0.073 12.6 0.0 0.074 12.6 0.0 1.0 1 0 0 1 1 1 0 Coronavirus accessory protein 3a DUF4374 PF14298.6 ORF57665 - 0.052 12.3 0.1 0.06 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4374) Sarcoglycan_1 PF04790.13 ORF57434 - 0.091 12.1 0.2 0.086 12.2 0.2 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein DUF1811 PF08838.10 ORF57177 - 0.011 16.0 0.2 0.011 15.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1811) adh_short_C2 PF13561.6 ORF57171 - 5e-23 81.9 0.0 5.8e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF57171 - 0.001 18.5 0.0 0.0014 18.1 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase DUF309 PF03745.14 ORF55760 - 0.17 11.6 0.1 0.29 10.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF309) LIP1 PF15904.5 ORF55170 - 0.05 14.0 0.0 0.059 13.7 0.0 1.1 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 zf-RING_2 PF13639.6 ORF54311 - 1.9e-10 40.9 14.3 2.3e-10 40.6 14.3 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF54311 - 5.8e-08 32.5 14.1 7.9e-08 32.0 14.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF54311 - 1.5e-07 31.2 10.3 1.8e-07 30.9 10.3 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF54311 - 2.1e-07 30.7 14.0 3e-07 30.2 14.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF54311 - 4.2e-07 29.8 12.4 5.2e-07 29.5 12.4 1.1 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF54311 - 1.7e-06 28.0 9.4 1.7e-06 28.0 9.4 1.6 1 1 1 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF54311 - 1.8e-05 24.5 10.7 2.6e-05 24.0 10.7 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 ORF54311 - 0.00013 22.2 13.1 0.0003 21.0 13.1 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF54311 - 0.0002 21.0 4.7 0.0002 21.0 4.7 1.6 2 0 0 2 2 1 1 RING-like zinc finger Siva PF05458.12 ORF54311 - 0.018 14.7 3.5 0.019 14.6 3.5 1.0 1 0 0 1 1 1 0 Cd27 binding protein (Siva) zf-C2H2_6 PF13912.6 ORF54311 - 0.024 14.6 0.2 0.024 14.6 0.2 2.0 2 0 0 2 2 2 0 C2H2-type zinc finger Baculo_IE-1 PF05290.11 ORF54311 - 0.063 13.2 5.4 0.082 12.9 5.4 1.1 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) Zn_ribbon_17 PF17120.5 ORF54311 - 0.16 11.6 11.2 0.28 10.8 11.1 1.4 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF54311 - 0.24 11.5 8.2 0.53 10.4 8.3 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 ORF54311 - 0.25 11.5 14.3 1.3 9.2 14.3 2.1 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-met PF12874.7 ORF54311 - 0.31 11.5 9.1 0.54 10.7 0.2 3.3 3 1 0 3 3 3 0 Zinc-finger of C2H2 type zf-RING_10 PF16685.5 ORF54311 - 1 9.6 11.1 1.5 9.0 11.1 1.4 1 1 0 1 1 1 0 zinc RING finger of MSL2 DUF1285 PF06938.11 ORF53928 - 0.09 12.8 0.0 0.092 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1285) MFS18 PF17352.2 ORF53889 - 0.0064 16.9 1.2 0.0075 16.6 1.2 1.0 1 0 0 1 1 1 1 Male Flower Specific protein 18 zf-ZPR1 PF03367.13 ORF5387 - 0.082 12.8 0.1 0.087 12.7 0.1 1.1 1 0 0 1 1 1 0 ZPR1 zinc-finger domain LacAB_rpiB PF02502.18 ORF53559 - 7.7e-23 81.0 0.3 8.6e-23 80.9 0.3 1.0 1 0 0 1 1 1 1 Ribose/Galactose Isomerase RRP14 PF15459.6 ORF52720 - 0.27 11.9 7.2 0.11 13.1 4.9 1.6 1 1 1 2 2 2 0 60S ribosome biogenesis protein Rrp14 Cwf_Cwc_15 PF04889.12 ORF51602 - 0.068 12.9 5.0 0.077 12.7 5.0 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Mqo PF06039.15 ORF5091 - 1e-08 34.2 0.0 1.1e-08 34.1 0.0 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) IL12p40_C PF10420.9 ORF50283 - 0.041 14.4 0.8 0.047 14.2 0.8 1.1 1 0 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus LCE6A PF15858.5 ORF49232 - 0.25 12.1 4.0 0.37 11.6 4.0 1.4 1 1 0 1 1 1 0 Late cornified envelope protein 6A family APO_RNA-bind PF05634.11 ORF47873 - 0.081 12.3 0.1 0.088 12.2 0.1 1.1 1 0 0 1 1 1 0 APO RNA-binding DUF3437 PF11919.8 ORF46721 - 0.15 12.0 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DnaA_N PF11638.8 ORF46707 - 0.0024 17.6 0.2 0.13 12.1 0.0 2.3 2 0 0 2 2 2 2 DnaA N-terminal domain DUF4635 PF15466.6 ORF46707 - 0.062 12.8 1.2 0.15 11.6 1.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4635) zf-TFIIIC PF12660.7 ORF45870 - 0.04 13.9 0.1 0.055 13.4 0.1 1.2 1 0 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex DUF99 PF01949.16 ORF45840 - 0.012 15.0 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF99 EF-hand_6 PF13405.6 ORF45658 - 0.012 15.5 0.4 0.022 14.7 0.4 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 ORF45658 - 0.068 13.6 0.0 0.071 13.6 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain pair Nudix_N_2 PF14803.6 ORF45036 - 0.48 10.4 3.0 0.76 9.7 0.1 2.6 2 1 1 3 3 3 0 Nudix N-terminal SgrT PF15894.5 ORF43959 - 2.5e-08 33.8 1.8 2.5e-08 33.8 1.8 2.1 2 0 0 2 2 2 1 Inhibitor of glucose uptake transporter SgrT Ntox28 PF15605.6 ORF42972 - 0.026 14.7 0.5 0.079 13.2 0.2 1.7 1 1 1 2 2 2 0 Bacterial toxin 28 CdiA_C PF18451.1 ORF42972 - 0.045 14.0 1.7 0.06 13.6 1.7 1.3 1 1 0 1 1 1 0 Contact-dependent growth inhibition CdiA C-terminal domain SMC_N PF02463.19 ORF42756 - 4.1e-17 62.4 0.7 4.9e-17 62.1 0.7 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Nop25 PF09805.9 ORF42271 - 0.61 10.6 14.7 0.66 10.4 14.7 1.1 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) Goodbye PF17109.5 ORF42271 - 0.97 9.9 3.5 0.74 10.3 2.5 1.3 1 1 0 1 1 1 0 fungal STAND N-terminal Goodbye domain Pes-10 PF07149.11 ORF42271 - 5.4 6.0 14.1 6.6 5.7 14.1 1.0 1 0 0 1 1 1 0 Pes-10 URO-D PF01208.17 ORF42207 - 2.9e-11 43.1 0.0 3.4e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Rol_Rep_N PF18106.1 ORF42029 - 0.096 13.0 0.3 0.15 12.4 0.2 1.4 2 0 0 2 2 2 0 Rolling Circle replication initiation protein N-terminal domain APA3_viroporin PF11289.8 ORF41659 - 0.073 12.6 0.0 0.074 12.6 0.0 1.0 1 0 0 1 1 1 0 Coronavirus accessory protein 3a GerD PF17898.1 ORF40257 - 0.021 14.7 1.1 0.024 14.6 1.1 1.1 1 0 0 1 1 1 0 Spore germination GerD central core domain DUF3073 PF11273.8 ORF40257 - 0.13 13.0 1.3 0.17 12.7 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) cNMP_binding PF00027.29 ORF39839 - 1.5e-14 53.8 0.0 1.9e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain KAAG1 PF15354.6 ORF39188 - 0.24 12.0 2.1 0.26 11.9 1.3 1.6 1 1 1 2 2 2 0 Kidney-associated antigen 1 MIP PF00230.20 ORF39051 - 1.3e-06 28.3 0.5 1.4e-06 28.2 0.5 1.0 1 0 0 1 1 1 1 Major intrinsic protein Interfer-bind PF09294.10 ORF39023 - 0.024 14.9 0.6 0.024 14.9 0.6 1.4 2 0 0 2 2 2 0 Interferon-alpha/beta receptor, fibronectin type III SF3b10 PF07189.11 ORF38620 - 1.1e-33 115.2 0.5 1.2e-33 115.1 0.5 1.0 1 0 0 1 1 1 1 Splicing factor 3B subunit 10 (SF3b10) Oxidoreduct_C PF16490.5 ORF38620 - 0.075 12.7 0.2 0.078 12.7 0.2 1.1 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain AdoHcyase_NAD PF00670.21 ORF38620 - 0.13 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Pilt PF15453.6 ORF38291 - 0.08 12.3 0.6 0.084 12.3 0.6 1.0 1 0 0 1 1 1 0 Protein incorporated later into Tight Junctions SH3-RhoG_link PF16609.5 ORF38242 - 0.013 15.3 1.3 0.013 15.2 1.3 1.0 1 0 0 1 1 1 0 SH3-RhoGEF linking unstructured region GOLGA2L5 PF15070.6 ORF37906 - 0.0011 17.7 0.9 0.0011 17.7 0.9 1.0 1 0 0 1 1 1 1 Putative golgin subfamily A member 2-like protein 5 ZapB PF06005.12 ORF37906 - 0.013 15.9 8.3 0.016 15.6 8.3 1.1 1 0 0 1 1 1 0 Cell division protein ZapB GAS PF13851.6 ORF37906 - 0.022 14.1 2.6 0.026 13.9 2.6 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding YabA PF06156.13 ORF37906 - 0.026 15.1 0.5 0.033 14.8 0.5 1.2 1 0 0 1 1 1 0 Initiation control protein YabA Cnn_1N PF07989.11 ORF37906 - 0.027 14.6 1.5 0.037 14.2 1.5 1.2 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 DivIC PF04977.15 ORF37906 - 0.17 11.7 2.3 0.19 11.5 2.3 1.1 1 0 0 1 1 1 0 Septum formation initiator Nop10p PF04135.12 ORF37601 - 0.022 14.8 0.2 0.036 14.1 0.2 1.3 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family Phage_HK97_TLTM PF06120.11 ORF3585 - 0.0015 17.8 0.5 0.0016 17.7 0.5 1.1 1 0 0 1 1 1 1 Tail length tape measure protein DUF3024 PF11225.8 ORF3585 - 0.037 14.3 0.2 0.057 13.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3024) DUF1943 PF09172.11 ORF3585 - 0.096 11.9 2.4 0.1 11.8 2.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Adhesin_P1_N PF18652.1 ORF3585 - 1.2 9.2 6.1 0.49 10.4 3.6 1.7 2 0 0 2 2 2 0 Adhesin P1 N-terminal domain Tho2 PF11262.8 ORF35100 - 0.066 12.4 12.7 0.065 12.4 12.7 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Pedibin PF08182.11 ORF35100 - 0.1 12.4 3.0 0.1 12.4 3.0 3.2 3 1 0 3 3 3 0 Pedibin/Hym-346 family DUF16 PF01519.16 ORF35100 - 0.11 13.0 10.8 0.17 12.4 10.7 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 IMD PF08397.11 ORF35100 - 0.27 10.6 9.5 0.27 10.6 9.5 1.1 1 0 0 1 1 1 0 IRSp53/MIM homology domain ZapB PF06005.12 ORF35100 - 1 9.9 16.2 0.82 10.2 11.1 2.4 2 1 0 2 2 2 0 Cell division protein ZapB ACCA PF03255.14 ORF35100 - 1.1 9.1 12.6 0.4 10.6 7.6 1.9 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VPS38 PF17649.1 ORF35100 - 1.2 7.9 12.7 1.3 7.9 12.7 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting 38 RAP1 PF07218.11 ORF35100 - 1.3 7.2 13.9 1.4 7.1 13.9 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Atg14 PF10186.9 ORF35100 - 1.3 8.0 9.4 1.4 8.0 9.4 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FAM76 PF16046.5 ORF35100 - 1.8 7.9 12.2 2 7.7 12.2 1.1 1 0 0 1 1 1 0 FAM76 protein LCIB_C_CA PF18599.1 ORF35100 - 1.9 7.7 5.3 2 7.7 5.3 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases PKcGMP_CC PF16808.5 ORF35100 - 3.5 7.5 20.4 0.1 12.5 8.8 3.4 2 1 2 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF1664 PF07889.12 ORF35100 - 3.8 7.6 8.3 4.7 7.3 8.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) TMPIT PF07851.13 ORF35100 - 5.7 6.1 11.1 6.1 6.0 11.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein XhlA PF10779.9 ORF35100 - 6.7 7.0 13.2 4.5 7.5 6.5 2.4 1 1 1 2 2 2 0 Haemolysin XhlA FapA PF03961.13 ORF35100 - 8.7 4.8 14.5 8.9 4.8 14.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF3836 PF12930.7 ORF34887 - 0.043 13.6 2.9 0.055 13.2 2.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF3836) FixS PF03597.15 ORF34887 - 0.086 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type Sugar_tr PF00083.24 ORF34536 - 1.8e-15 56.8 0.8 1.8e-15 56.7 0.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter CmlA_N PF18456.1 ORF34510 - 0.11 11.8 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain SUI1 PF01253.22 ORF34197 - 3.1e-11 43.6 0.3 5.3e-11 42.9 0.3 1.4 1 0 0 1 1 1 1 Translation initiation factor SUI1 AAA_8 PF12780.7 ORF3417 - 0.028 13.8 0.1 0.028 13.8 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 Pyr_redox_2 PF07992.14 ORF3417 - 0.082 12.1 0.1 0.087 12.0 0.1 1.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase XTBD PF11952.8 ORF34098 - 0.12 12.1 0.6 0.13 12.0 0.6 1.1 1 0 0 1 1 1 0 XRN-Two Binding Domain, XTBD DUF3810 PF12725.7 ORF34098 - 0.18 11.1 5.4 0.21 10.9 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) 2TM PF13239.6 ORF33877 - 0.49 10.7 3.4 0.6 10.4 3.4 1.2 1 0 0 1 1 1 0 2TM domain DUF761 PF05553.11 ORF33727 - 5.2 6.7 6.8 16 5.2 0.3 3.0 3 0 0 3 3 3 0 Cotton fibre expressed protein DUF4510 PF14971.6 ORF3324 - 0.0023 18.3 0.4 0.0024 18.2 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4510) FUSC PF04632.12 ORF3324 - 0.046 12.3 1.0 0.047 12.2 1.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF2530 PF10745.9 ORF32737 - 0.067 13.4 0.2 0.082 13.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) LIP1 PF15904.5 ORF32235 - 0.05 14.0 0.0 0.059 13.7 0.0 1.1 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 Mei5_like PF17021.5 ORF30512 - 0.023 14.7 0.3 0.054 13.5 0.1 1.6 2 0 0 2 2 2 0 Putative double-strand recombination repair-like Rab15_effector PF15208.6 ORF30512 - 0.029 13.7 0.0 0.033 13.5 0.0 1.1 1 0 0 1 1 1 0 Rab15 effector Peptidase_C1 PF00112.23 ORF30071 - 6.2e-16 59.2 0.1 6.7e-16 59.0 0.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease SPATA19 PF15212.6 ORF3007 - 0.15 12.3 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial DUF3791 PF12668.7 ORF2871 - 0.031 14.3 0.1 0.042 13.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3791) Adipogenin PF15202.6 ORF28039 - 0.065 13.3 0.5 2.1 8.4 0.4 2.1 1 1 1 2 2 2 0 Adipogenin RNA_pol_Rpb1_4 PF05000.17 ORF2774 - 0.09 12.7 0.1 0.12 12.3 0.1 1.3 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 4 DUF4364 PF14277.6 ORF2774 - 0.14 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DMPK_coil PF08826.10 ORF27721 - 0.078 13.1 10.1 0.35 11.0 2.1 2.8 2 1 1 3 3 3 0 DMPK coiled coil domain like TTKRSYEDQ PF10212.9 ORF27721 - 0.42 9.5 6.4 0.44 9.5 6.4 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein KLRAQ PF10205.9 ORF27721 - 0.61 10.4 8.3 3.7 7.8 8.3 2.0 1 1 0 1 1 1 0 Predicted coiled-coil domain-containing protein DUF4871 PF16167.5 ORF27628 - 0.094 12.7 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) TFIIF_beta_N PF17683.1 ORF27560 - 0.0011 19.6 0.1 0.0013 19.4 0.1 1.1 1 0 0 1 1 1 1 TFIIF, beta subunit N-terminus DUF4596 PF15363.6 ORF27358 - 0.26 11.6 1.4 0.39 11.0 1.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4596) E3_UbLigase_R4 PF13764.6 ORF27257 - 0.0083 14.4 0.0 0.009 14.2 0.0 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 Imm39 PF15568.6 ORF26563 - 0.072 13.2 0.1 0.12 12.5 0.1 1.3 1 1 0 1 1 1 0 Immunity protein 39 DUF4871 PF16167.5 ORF26473 - 0.094 12.7 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) Synapsin_N PF10581.9 ORF26455 - 0.33 10.9 0.2 0.33 10.9 0.2 2.4 2 0 0 2 2 2 0 Synapsin N-terminal MTBP_N PF14918.6 ORF26327 - 0.21 11.0 0.0 0.24 10.8 0.0 1.0 1 0 0 1 1 1 0 MDM2-binding DUF1811 PF08838.10 ORF26179 - 0.011 16.0 0.2 0.011 15.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1811) Shal-type PF11601.8 ORF26047 - 0.026 14.0 0.3 0.043 13.3 0.3 1.3 1 0 0 1 1 1 0 Shal-type voltage-gated potassium channels, N-terminal PUF PF00806.19 ORF25947 - 8.9e-08 31.4 0.8 0.00035 20.1 0.1 2.3 2 0 0 2 2 2 2 Pumilio-family RNA binding repeat CdhD PF03599.16 ORF25947 - 0.021 13.6 0.0 0.021 13.6 0.0 1.0 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit CmlA_N PF18456.1 ORF25889 - 0.11 11.8 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain Semenogelin PF05474.11 ORF25791 - 0.032 12.8 0.1 0.036 12.6 0.1 1.0 1 0 0 1 1 1 0 Semenogelin CCDC14 PF15254.6 ORF25791 - 0.27 9.8 0.4 0.26 9.9 0.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 ANAPC4_WD40 PF12894.7 ORF2577 - 1.9e-05 24.9 0.1 0.0001 22.5 0.1 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF2577 - 0.0052 17.6 0.2 0.029 15.2 0.5 1.9 2 1 0 2 2 2 1 WD domain, G-beta repeat Queuosine_synth PF02547.15 ORF25633 - 0.088 11.9 0.0 0.088 11.9 0.0 1.0 1 0 0 1 1 1 0 Queuosine biosynthesis protein SNN_linker PF09050.10 ORF24864 - 0.025 14.4 0.4 0.025 14.4 0.4 1.9 2 0 0 2 2 2 0 Stannin unstructured linker CCDC85 PF10226.9 ORF24814 - 0.0027 17.4 2.0 0.003 17.3 2.0 1.1 1 0 0 1 1 1 1 CCDC85 family K-box PF01486.17 ORF24814 - 0.0043 17.2 4.7 0.008 16.3 4.7 1.5 1 0 0 1 1 1 1 K-box region DUF1465 PF07323.12 ORF24814 - 0.044 13.6 2.0 0.051 13.4 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Pinin_SDK_memA PF04696.13 ORF24814 - 0.11 12.5 7.6 0.13 12.3 7.6 1.1 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region HAUS6_N PF14661.6 ORF24814 - 0.92 9.0 6.8 1 8.9 6.8 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus ComGG PF14173.6 ORF24705 - 0.0051 17.2 0.8 0.0064 16.9 0.8 1.1 1 0 0 1 1 1 1 ComG operon protein 7 OCIA PF07051.11 ORF24705 - 0.03 14.3 0.1 0.045 13.8 0.1 1.3 1 0 0 1 1 1 0 Ovarian carcinoma immunoreactive antigen (OCIA) Pox_F17 PF04767.12 ORF24696 - 8.6 6.9 8.3 1.8 9.1 3.8 1.9 1 1 1 2 2 2 0 DNA-binding 11 kDa phosphoprotein Ribosomal_S19e PF01090.19 ORF24508 - 3.5e-26 91.5 0.7 3.8e-26 91.4 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 ORF24508 - 4.2e-05 23.4 0.2 5.7e-05 23.0 0.2 1.2 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_27 PF13463.6 ORF24508 - 0.029 14.9 0.0 0.043 14.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain CDC37_C PF08564.10 ORF24508 - 0.052 13.7 0.1 0.061 13.5 0.1 1.1 1 0 0 1 1 1 0 Cdc37 C terminal domain DUF2250 PF10007.9 ORF24508 - 0.15 12.2 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) MFS_1 PF07690.16 ORF24122 - 0.061 12.2 5.1 0.062 12.2 5.1 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily RDD PF06271.12 ORF24122 - 0.094 12.9 5.1 0.12 12.6 5.1 1.1 1 0 0 1 1 1 0 RDD family DUF5381 PF17353.2 ORF24122 - 0.35 10.6 8.6 0.41 10.4 8.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5381) DUF872 PF05915.12 ORF24122 - 0.88 9.7 5.0 1.1 9.5 5.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Pkinase PF00069.25 ORF23635 - 1.2e-24 87.1 0.0 1.3e-24 87.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF23635 - 1.9e-12 47.0 0.0 2.1e-12 46.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF23635 - 0.24 11.3 0.0 0.27 11.1 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF2306 PF10067.9 ORF22367 - 0.029 14.6 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2306) AAA_6 PF12774.7 ORF22156 - 7.8e-18 64.5 0.0 8.4e-18 64.4 0.0 1.0 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region MAAL_N PF05034.13 ORF22017 - 0.059 13.0 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus Ribonuc_red_lgN PF00317.21 ORF22017 - 0.099 12.7 0.4 0.13 12.3 0.4 1.2 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain DUF3450 PF11932.8 ORF21885 - 4e-05 23.0 6.0 4.1e-05 23.0 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) BRE1 PF08647.11 ORF21885 - 4.1e-05 23.6 6.7 4.1e-05 23.6 6.7 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Spc7 PF08317.11 ORF21885 - 0.00062 18.7 5.9 0.00072 18.5 5.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 ORF21885 - 0.00081 19.9 7.4 0.00096 19.7 7.4 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region Tropomyosin PF00261.20 ORF21885 - 0.0015 18.0 4.8 0.0017 17.8 4.8 1.1 1 0 0 1 1 1 1 Tropomyosin DUF4164 PF13747.6 ORF21885 - 0.0017 18.6 5.1 0.0021 18.3 4.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) Seryl_tRNA_N PF02403.22 ORF21885 - 0.0023 18.1 6.4 0.0027 17.9 6.4 1.1 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain TMF_TATA_bd PF12325.8 ORF21885 - 0.0054 16.9 6.4 0.0056 16.9 6.4 1.0 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Muted PF14942.6 ORF21885 - 0.0063 16.9 5.1 0.0066 16.8 5.1 1.0 1 0 0 1 1 1 1 Organelle biogenesis, Muted-like protein CEP209_CC5 PF16574.5 ORF21885 - 0.0076 16.4 3.4 0.0086 16.2 3.4 1.2 1 0 0 1 1 1 1 Coiled-coil region of centrosome protein CE290 DUF3782 PF12644.7 ORF21885 - 0.0078 16.3 1.8 0.013 15.6 1.6 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3782) JIP_LZII PF16471.5 ORF21885 - 0.0092 16.1 4.6 0.0092 16.1 4.6 1.8 1 1 1 2 2 2 1 JNK-interacting protein leucine zipper II DHR10 PF18595.1 ORF21885 - 0.0096 16.0 5.6 0.011 15.8 5.6 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain IFT57 PF10498.9 ORF21885 - 0.0097 14.9 4.5 0.0094 15.0 4.5 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Atg14 PF10186.9 ORF21885 - 0.014 14.5 4.0 0.015 14.4 4.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Tropomyosin_1 PF12718.7 ORF21885 - 0.015 15.5 6.3 0.018 15.2 6.3 1.1 1 0 0 1 1 1 0 Tropomyosin like DASH_Dad1 PF08649.10 ORF21885 - 0.015 15.4 4.1 0.04 14.1 2.1 2.5 1 1 1 2 2 2 0 DASH complex subunit Dad1 FmiP_Thoc5 PF09766.9 ORF21885 - 0.017 14.5 3.9 0.019 14.3 3.9 1.1 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 HMMR_N PF15905.5 ORF21885 - 0.02 14.4 6.2 0.02 14.4 6.2 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal FapA PF03961.13 ORF21885 - 0.02 13.5 5.3 0.022 13.4 5.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A COG2 PF06148.11 ORF21885 - 0.022 14.8 1.7 0.03 14.4 1.7 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF1664 PF07889.12 ORF21885 - 0.023 14.7 4.2 0.58 10.2 1.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 ORF21885 - 0.027 14.9 1.5 0.036 14.5 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) PI3K_P85_iSH2 PF16454.5 ORF21885 - 0.043 13.4 7.2 0.071 12.7 6.0 1.6 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain NPV_P10 PF05531.12 ORF21885 - 0.046 14.2 4.6 0.067 13.7 4.6 1.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Hormone_1 PF00103.20 ORF21885 - 0.047 13.4 1.2 0.053 13.3 1.2 1.1 1 0 0 1 1 1 0 Somatotropin hormone family ABC_tran_CTD PF16326.5 ORF21885 - 0.054 13.7 8.5 0.093 13.0 8.5 1.5 1 1 0 1 1 1 0 ABC transporter C-terminal domain Allexi_40kDa PF05549.11 ORF21885 - 0.081 12.4 1.7 0.085 12.4 1.7 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein THOC7 PF05615.13 ORF21885 - 0.081 13.2 8.2 0.16 12.2 8.2 1.6 1 1 0 1 1 1 0 Tho complex subunit 7 FemAB PF02388.16 ORF21885 - 0.085 11.7 3.4 0.097 11.5 3.4 1.0 1 0 0 1 1 1 0 FemAB family CLZ PF16526.5 ORF21885 - 0.086 13.2 5.4 0.33 11.3 3.1 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF1515 PF07439.11 ORF21885 - 0.1 12.6 0.5 0.13 12.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) Prefoldin PF02996.17 ORF21885 - 0.12 12.3 8.4 0.25 11.3 3.7 2.0 1 1 1 2 2 2 0 Prefoldin subunit Syntaxin-6_N PF09177.11 ORF21885 - 0.16 12.5 4.2 0.38 11.3 4.1 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF21885 - 0.18 11.6 4.9 0.23 11.3 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) TMPIT PF07851.13 ORF21885 - 0.19 11.0 4.8 0.2 10.9 4.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein BST2 PF16716.5 ORF21885 - 0.23 12.1 6.1 0.38 11.4 4.1 1.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 HAUS6_N PF14661.6 ORF21885 - 0.33 10.5 3.8 0.37 10.3 3.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus YabA PF06156.13 ORF21885 - 0.38 11.4 4.7 0.49 11.1 4.7 1.1 1 0 0 1 1 1 0 Initiation control protein YabA Spc24 PF08286.11 ORF21885 - 0.6 10.4 8.3 1.5 9.1 8.3 1.7 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 XhlA PF10779.9 ORF21885 - 0.9 9.8 6.4 1.7 8.9 6.2 1.6 1 1 0 1 1 1 0 Haemolysin XhlA DivIC PF04977.15 ORF21885 - 1.8 8.4 7.6 3.9 7.3 7.6 1.7 1 1 0 1 1 1 0 Septum formation initiator DUF4199 PF13858.6 ORF21885 - 2.5 8.5 4.8 2.9 8.3 4.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) RecT PF03837.14 ORF21786 - 0.025 14.1 0.1 0.029 13.8 0.1 1.2 1 0 0 1 1 1 0 RecT family Het-C PF07217.11 ORF21786 - 0.057 12.0 0.0 0.065 11.8 0.0 1.0 1 0 0 1 1 1 0 Heterokaryon incompatibility protein Het-C Tissue_fac PF01108.17 ORF21228 - 0.093 12.6 0.1 0.096 12.5 0.1 1.1 1 0 0 1 1 1 0 Tissue factor Adeno_PIX PF03955.14 ORF210 - 0.16 12.2 2.9 0.2 11.9 2.9 1.2 1 0 0 1 1 1 0 Adenovirus hexon-associated protein (IX) Pkinase PF00069.25 ORF20972 - 5.9e-31 107.8 0.1 6.5e-31 107.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF20972 - 8.1e-16 58.1 0.0 8.6e-16 58.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF20972 - 0.00012 21.5 0.0 0.00012 21.5 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF20972 - 0.027 13.3 0.0 0.027 13.3 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase Kdo PF06293.14 ORF20972 - 0.033 13.5 0.0 0.035 13.4 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF20972 - 0.11 12.4 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family ubiquitin PF00240.23 ORF20929 - 0.00023 20.9 1.0 0.0012 18.6 1.0 1.9 1 1 0 1 1 1 1 Ubiquitin family TmoB PF06234.12 ORF20929 - 0.025 14.7 0.0 0.029 14.5 0.0 1.1 1 0 0 1 1 1 0 Toluene-4-monooxygenase system protein B (TmoB) GCN5L1 PF06320.13 ORF20929 - 0.036 14.2 0.2 0.04 14.1 0.2 1.1 1 0 0 1 1 1 0 GCN5-like protein 1 (GCN5L1) DUF4116 PF13475.6 ORF20104 - 1.1e-38 130.7 0.0 1e-15 57.2 0.0 2.5 1 1 2 3 3 3 3 Domain of unknown function (DUF4116) NtA PF03146.15 ORF18902 - 0.017 15.0 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Agrin NtA domain adh_short PF00106.25 ORF18221 - 5.8e-08 32.4 0.0 6.6e-08 32.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF18221 - 0.027 14.4 0.0 0.035 14.0 0.0 1.1 1 0 0 1 1 1 0 KR domain Eno-Rase_NADH_b PF12242.8 ORF18221 - 0.042 13.6 0.0 0.06 13.1 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase adh_short_C2 PF13561.6 ORF18221 - 0.12 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase DUF4196 PF13846.6 ORF17341 - 4.7e-05 23.6 6.6 0.00097 19.3 0.6 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4196) Glyco_hydro_98C PF08307.11 ORF15852 - 0.14 11.6 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 98 C-terminal domain SH3-RhoG_link PF16609.5 ORF15396 - 0.013 15.3 1.3 0.013 15.2 1.3 1.0 1 0 0 1 1 1 0 SH3-RhoGEF linking unstructured region IceA2 PF05862.11 ORF14739 - 0.1 12.6 0.3 1.4 8.9 0.1 2.2 1 1 1 2 2 2 0 Helicobacter pylori IceA2 protein Peptidase_C65 PF10275.9 ORF14175 - 0.012 15.1 1.1 0.012 15.1 1.1 1.0 1 0 0 1 1 1 0 Peptidase C65 Otubain ToxS PF17323.2 ORF14175 - 0.041 13.5 1.1 0.049 13.3 1.1 1.1 1 0 0 1 1 1 0 Trans-membrane regulatory protein ToxS ABC2_membrane_3 PF12698.7 ORF14175 - 0.18 10.9 0.5 0.18 10.8 0.5 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Trans_reg_C PF00486.28 ORF13920 - 0.006 16.6 0.0 0.008 16.2 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal UQ_con PF00179.26 ORF13744 - 1.3e-20 73.5 0.0 1.4e-20 73.4 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme BRCA-2_OB3 PF09104.10 ORF13601 - 0.05 13.3 0.1 0.056 13.1 0.1 1.1 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 MtrA PF04208.14 ORF12582 - 0.2 11.3 0.0 0.27 10.9 0.0 1.4 1 1 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit A Spore_IV_A PF09547.10 ORF1235 - 0.18 10.7 0.0 0.21 10.5 0.0 1.0 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) Keratin_B2 PF01500.17 ORF118 - 0.089 12.8 0.1 0.1 12.6 0.1 1.1 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein Ras PF00071.22 ORF11725 - 5.6e-33 113.8 0.2 6.1e-33 113.7 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF11725 - 2.3e-26 92.4 0.1 2.5e-26 92.3 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF11725 - 8.5e-11 41.6 0.1 9.2e-11 41.5 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF11725 - 0.00019 21.5 0.0 0.00021 21.4 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF11725 - 0.00023 20.6 0.0 0.00024 20.6 0.0 1.0 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region TniB PF05621.11 ORF11725 - 0.038 13.4 0.0 0.047 13.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein GTP_EFTU PF00009.27 ORF11725 - 0.055 13.0 0.1 0.12 11.9 0.0 1.5 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain CxC4 PF18717.1 ORF11416 - 0.064 13.1 2.4 0.08 12.8 2.4 1.1 1 0 0 1 1 1 0 CxC4 like cysteine cluster associated with KDZ transposases Mlo PF03094.15 ORF112508 - 0.057 11.8 2.7 0.06 11.7 2.7 1.0 1 0 0 1 1 1 0 Mlo family SOAR PF16533.5 ORF112349 - 0.11 12.5 0.2 0.13 12.2 0.2 1.1 1 0 0 1 1 1 0 STIM1 Orai1-activating region Phage_GPA PF05840.13 ORF112339 - 0.027 13.6 0.2 0.027 13.6 0.2 1.1 1 0 0 1 1 1 0 Bacteriophage replication gene A protein (GPA) Med31 PF05669.12 ORF111980 - 0.015 15.3 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 SOH1 XTBD PF11952.8 ORF111250 - 0.12 12.1 0.6 0.13 12.0 0.6 1.1 1 0 0 1 1 1 0 XRN-Two Binding Domain, XTBD DUF3810 PF12725.7 ORF111250 - 0.18 11.1 5.4 0.21 10.9 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) CvfB_WH PF17783.1 ORF109922 - 0.031 14.1 0.9 1.5 8.7 0.0 2.5 2 1 1 3 3 3 0 CvfB-like winged helix domain Med16 PF11635.8 ORF109330 - 1.5 6.7 4.5 1.6 6.6 4.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 PBC PF03792.13 ORF109227 - 0.049 13.4 0.0 0.055 13.2 0.0 1.1 1 0 0 1 1 1 0 PBC domain Reo_P9 PF06043.11 ORF109227 - 0.071 12.5 0.1 0.076 12.4 0.1 1.0 1 0 0 1 1 1 0 Reovirus P9-like family GST_C_2 PF13410.6 ORF109227 - 0.085 12.9 0.0 0.18 11.8 0.0 1.6 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF109227 - 0.1 12.8 0.1 0.18 12.0 0.1 1.5 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DUSP PF06337.12 ORF10911 - 0.55 10.9 3.7 0.73 10.5 3.7 1.3 1 1 0 1 1 1 0 DUSP domain RRP14 PF15459.6 ORF108740 - 0.27 11.9 7.2 0.11 13.1 4.9 1.6 1 1 1 2 2 2 0 60S ribosome biogenesis protein Rrp14 AidB_N PF18158.1 ORF108439 - 0.74 9.7 5.5 0.57 10.1 0.3 2.0 1 1 1 2 2 2 0 Adaptive response protein AidB N-terminal domain Pap_E4 PF02711.14 ORF107476 - 0.13 13.2 1.6 0.13 13.2 1.6 1.2 1 1 0 1 1 1 0 E4 protein YuiB PF14068.6 ORF107449 - 0.0026 18.3 6.5 0.0033 18.0 6.5 1.2 1 0 0 1 1 1 1 Putative membrane protein zf-H2C2_5 PF13909.6 ORF106912 - 0.19 11.5 2.1 0.34 10.7 2.1 1.5 1 0 0 1 1 1 0 C2H2-type zinc-finger domain SHIPPO-rpt PF07004.12 ORF106450 - 0.95 10.5 2.9 7.9 7.6 0.4 2.3 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat UPF0167 PF03691.14 ORF105868 - 0.071 12.9 0.0 0.085 12.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0167) Sarcoglycan_1 PF04790.13 ORF105848 - 0.091 12.1 0.2 0.086 12.2 0.2 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein EamA PF00892.20 ORF105266 - 0.011 15.9 0.8 0.015 15.5 0.8 1.2 1 0 0 1 1 1 0 EamA-like transporter family UPF0227 PF05728.12 ORF104820 - 1.2e-23 84.0 0.3 1.3e-23 83.9 0.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) Glyco_hydro_49N PF17433.2 ORF104216 - 0.073 12.7 0.2 0.071 12.7 0.2 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 49 N-terminal Ig-like domain Stevor PF17410.2 ORF103983 - 0.38 10.3 3.0 0.42 10.1 3.0 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Albumin_I PF08027.11 ORF103734 - 0.073 12.7 1.5 0.073 12.7 1.5 1.7 2 0 0 2 2 2 0 Albumin I chain b DUF1480 PF07351.13 ORF103540 - 2.5e-38 130.2 0.0 2.8e-38 130.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1480) Toxin_20 PF08089.11 ORF102836 - 0.092 12.9 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 Huwentoxin-II family RICH PF05062.12 ORF102722 - 0.075 13.4 2.3 0.079 13.3 1.4 1.5 1 1 0 1 1 1 0 RICH domain ACP_PD PF04336.12 ORF102722 - 0.083 13.3 0.1 0.11 12.9 0.1 1.2 1 0 0 1 1 1 0 Acyl carrier protein phosphodiesterase GCV_H PF01597.19 ORF102722 - 0.098 12.5 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Glycine cleavage H-protein MAAL_N PF05034.13 ORF102514 - 0.059 13.0 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus Ribonuc_red_lgN PF00317.21 ORF102514 - 0.099 12.7 0.4 0.13 12.3 0.4 1.2 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain 2Fe-2S_thioredx PF01257.19 ORF101885 - 0.1 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like [2Fe-2S] ferredoxin DUF2481 PF10654.9 ORF101521 - 0.11 12.5 2.7 0.12 12.4 1.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2481) Glutaredoxin PF00462.24 ORF100970 - 2.9e-24 85.0 0.0 3.4e-24 84.8 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 ORF100970 - 6.2e-07 29.7 0.0 7.1e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF100970 - 4.7e-05 23.6 0.0 5.8e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 ORF100970 - 0.0006 20.2 0.0 0.0008 19.8 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) SH3BGR PF04908.15 ORF100970 - 0.0022 18.1 0.0 0.0035 17.5 0.0 1.3 1 1 0 1 1 1 1 SH3-binding, glutamic acid-rich protein Thioredoxin_3 PF13192.6 ORF100970 - 0.021 14.9 0.0 0.034 14.2 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin domain GST_N PF02798.20 ORF100970 - 0.021 15.1 0.0 0.024 15.0 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.6 ORF100970 - 0.083 13.4 0.0 0.12 12.8 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_4 PF13462.6 ORF100970 - 0.26 11.4 0.5 7 6.8 0.3 2.0 1 1 1 2 2 2 0 Thioredoxin STAT1_TAZ2bind PF12162.8 ORF100574 - 0.05 13.2 1.0 0.79 9.4 0.2 2.2 2 0 0 2 2 2 0 STAT1 TAZ2 binding domain EPF PF17181.4 ORF10047 - 0.0052 16.8 0.7 0.0083 16.1 0.7 1.5 1 0 0 1 1 1 1 Epidermal patterning factor proteins Ctf8 PF09696.10 ORF100121 - 0.002 18.4 0.4 0.0074 16.6 0.4 1.8 1 1 0 1 1 1 1 Ctf8 FixO PF02433.15 ORF100117 - 0.087 12.3 0.2 0.095 12.1 0.2 1.0 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO DUF4078 PF13300.6 ORF100117 - 0.12 12.7 0.9 0.9 9.9 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4078) Filament_head PF04732.14 NODE_65690_length_244_cov_1.143541_g57749_i0reverse_frame_1 - 0.024 15.5 0.5 0.031 15.1 0.5 1.2 1 0 0 1 1 1 0 Intermediate filament head (DNA binding) region DUF1533 PF07550.11 NODE_65686_length_244_cov_1.148325_g57745_i0reverse_frame_1 - 0.077 12.9 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1533) UL17 PF17640.2 NODE_65686_length_244_cov_1.148325_g57745_i0forward_frame_1 - 0.34 11.0 2.7 0.81 9.7 0.1 2.5 1 1 3 4 4 4 0 Uncharacterized UL17 PNTB PF02233.16 NODE_65682_length_244_cov_1.229665_g57741_i0reverse_frame_1 - 0.11 11.3 3.8 0.11 11.4 3.8 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit VWD PF00094.25 NODE_65682_length_244_cov_1.229665_g57741_i0reverse_frame_1 - 0.15 12.3 0.1 0.18 12.0 0.1 1.1 1 0 0 1 1 1 0 von Willebrand factor type D domain Pam17 PF08566.10 NODE_65682_length_244_cov_1.229665_g57741_i0reverse_frame_1 - 0.7 9.7 2.5 0.84 9.5 2.5 1.1 1 0 0 1 1 1 0 Mitochondrial import protein Pam17 CTV_P6 PF06706.11 NODE_65675_length_244_cov_1.334928_g57734_i0reverse_frame_1 - 0.12 12.1 0.8 0.22 11.2 0.8 1.4 1 0 0 1 1 1 0 Citrus tristeza virus 6-kDa protein zf-dskA_traR PF01258.17 NODE_65675_length_244_cov_1.334928_g57734_i0forward_frame_1 - 0.1 12.6 0.3 0.19 11.7 0.3 1.5 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger zf-Tim10_DDP PF02953.15 NODE_65674_length_244_cov_1.349282_g57733_i0reverse_frame_1 - 0.085 12.5 0.6 0.11 12.2 0.6 1.3 1 0 0 1 1 1 0 Tim10/DDP family zinc finger DUF1086 PF06461.11 NODE_65673_length_244_cov_1.368421_g57732_i0reverse_frame_1 - 0.17 11.7 0.0 0.36 10.7 0.0 1.4 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1086) Mito_fiss_Elm1 PF06258.11 NODE_65664_length_244_cov_1.492823_g57723_i0reverse_frame_1 - 0.16 11.0 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial fission ELM1 DUF3350 PF11830.8 NODE_65663_length_244_cov_1.511962_g57722_i0reverse_frame_1 - 0.046 14.0 0.0 0.066 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3350) RloB PF13707.6 NODE_65660_length_244_cov_1.521531_g57719_i0forward_frame_1 - 0.0099 16.1 0.6 0.011 16.0 0.6 1.1 1 0 0 1 1 1 1 RloB-like protein MTHFR_C PF12225.8 NODE_65655_length_244_cov_1.545455_g57714_i0reverse_frame_1 - 0.013 15.1 1.0 0.017 14.7 1.0 1.2 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal Fip1 PF05182.13 NODE_65652_length_244_cov_1.583732_g57711_i0forward_frame_1 - 0.041 13.4 0.8 0.05 13.1 0.0 1.5 2 0 0 2 2 2 0 Fip1 motif HHA PF05321.11 NODE_65649_length_244_cov_1.622010_g57708_i0reverse_frame_1 - 2.6e-27 94.9 0.0 3.1e-27 94.6 0.0 1.1 1 0 0 1 1 1 1 Haemolysin expression modulating protein DUF1877 PF08974.10 NODE_65649_length_244_cov_1.622010_g57708_i0reverse_frame_1 - 0.13 12.3 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1877) PsbN PF02468.15 NODE_65637_length_244_cov_1.760766_g57696_i0forward_frame_1 - 3 7.7 5.1 1.2 9.1 0.7 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre N protein (psbN) DUF4761 PF15958.5 NODE_65631_length_244_cov_1.832536_g57690_i0reverse_frame_1 - 0.034 14.3 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4761) PHD_like PF12910.7 NODE_65623_length_244_cov_2.028708_g57682_i0forward_frame_1 - 0.035 14.1 0.0 0.039 14.0 0.0 1.1 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system UL17 PF17640.2 NODE_65619_length_244_cov_2.066986_g57678_i0reverse_frame_1 - 0.07 13.1 2.4 0.086 12.9 2.4 1.1 1 0 0 1 1 1 0 Uncharacterized UL17 DUF1310 PF07006.11 NODE_65609_length_244_cov_2.157895_g57668_i0reverse_frame_1 - 0.17 11.9 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1310) F1F0-ATPsyn_F PF10791.9 NODE_65602_length_244_cov_2.205742_g57661_i0reverse_frame_1 - 0.021 15.3 0.0 0.028 14.9 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial F1-F0 ATP synthase subunit F of fungi LRRCT PF01463.24 NODE_65598_length_244_cov_2.267943_g57657_i0forward_frame_1 - 0.043 14.4 0.1 0.14 12.7 0.1 1.9 1 0 0 1 1 1 0 Leucine rich repeat C-terminal domain zf_Rg PF17915.1 NODE_65595_length_244_cov_2.325359_g57654_i0reverse_frame_1 - 0.12 11.8 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Reverse gyrase zinc finger DUF1041 PF06292.17 NODE_65595_length_244_cov_2.325359_g57654_i0forward_frame_1 - 0.051 14.0 0.1 0.062 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1041) DUF4926 PF16277.5 NODE_65595_length_244_cov_2.325359_g57654_i0forward_frame_1 - 0.17 11.3 0.6 18 4.7 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4926) DSX_dimer PF08828.10 NODE_65587_length_244_cov_2.440191_g57646_i0forward_frame_1 - 0.1 12.3 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Doublesex dimerisation domain PAP2 PF01569.21 NODE_65580_length_244_cov_2.559809_g57639_i0forward_frame_1 - 0.0096 15.7 0.1 0.011 15.5 0.1 1.1 1 0 0 1 1 1 1 PAP2 superfamily SRP9-21 PF05486.12 NODE_65578_length_244_cov_2.598086_g57637_i0forward_frame_1 - 0.051 14.0 1.1 0.063 13.7 1.1 1.1 1 0 0 1 1 1 0 Signal recognition particle 9 kDa protein (SRP9) MFS_1 PF07690.16 NODE_65576_length_244_cov_2.612440_g57635_i0reverse_frame_1 - 0.00018 20.6 0.1 0.00019 20.5 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PTR2 PF00854.21 NODE_65576_length_244_cov_2.612440_g57635_i0reverse_frame_1 - 0.0025 16.7 0.6 0.0027 16.6 0.6 1.0 1 0 0 1 1 1 1 POT family PSK_trans_fac PF07704.11 NODE_65574_length_244_cov_2.636364_g57633_i0forward_frame_1 - 0.47 11.3 8.1 1.2 10.0 0.9 2.0 1 1 1 2 2 2 0 Rv0623-like transcription factor NAD_binding_7 PF13241.6 NODE_65571_length_244_cov_2.760766_g57630_i0forward_frame_1 - 0.0058 17.1 0.2 0.009 16.4 0.2 1.2 1 0 0 1 1 1 1 Putative NAD(P)-binding Pyr_redox_3 PF13738.6 NODE_65571_length_244_cov_2.760766_g57630_i0forward_frame_1 - 0.012 14.9 0.0 0.012 14.9 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 NODE_65571_length_244_cov_2.760766_g57630_i0forward_frame_1 - 0.047 12.9 0.0 0.047 12.9 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase UL2 PF08196.11 NODE_65570_length_244_cov_2.861244_g57629_i0reverse_frame_1 - 0.072 13.1 1.4 0.11 12.5 1.4 1.4 1 0 0 1 1 1 0 UL2 protein CorC_HlyC PF03471.17 NODE_65569_length_244_cov_2.889952_g57628_i0reverse_frame_1 - 7.5e-18 64.3 0.2 8.3e-18 64.2 0.2 1.0 1 0 0 1 1 1 1 Transporter associated domain ADH_zinc_N PF00107.26 NODE_65564_length_244_cov_3.047847_g57623_i0forward_frame_1 - 0.023 14.7 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 Zinc-binding dehydrogenase TerC PF03741.16 NODE_65564_length_244_cov_3.047847_g57623_i0forward_frame_1 - 0.07 12.8 0.1 0.081 12.6 0.1 1.0 1 0 0 1 1 1 0 Integral membrane protein TerC family RFX5_DNA_bdg PF14621.6 NODE_65562_length_244_cov_3.325359_g57621_i0reverse_frame_1 - 0.17 11.6 1.9 0.19 11.5 1.9 1.1 1 0 0 1 1 1 0 RFX5 DNA-binding domain RVT_1 PF00078.27 NODE_65562_length_244_cov_3.325359_g57621_i0forward_frame_1 - 0.15 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) HTH_33 PF13592.6 NODE_65560_length_244_cov_3.583732_g57619_i0forward_frame_1 - 0.096 12.3 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix Tmemb_9 PF05434.11 NODE_65553_length_244_cov_12.071770_g57612_i0forward_frame_1 - 1.2 9.0 2.4 1.4 8.8 2.4 1.1 1 0 0 1 1 1 0 TMEM9 GAGE PF05831.11 NODE_65532_length_244_cov_50.043062_g57591_i0reverse_frame_1 - 0.028 14.9 1.6 0.041 14.4 1.6 1.2 1 0 0 1 1 1 0 GAGE protein PDZ_3 PF17815.1 NODE_65532_length_244_cov_50.043062_g57591_i0forward_frame_1 - 0.0033 17.3 0.0 0.0042 16.9 0.0 1.2 1 0 0 1 1 1 1 PDZ domain TMEM192 PF14802.6 NODE_65529_length_244_cov_52.468900_g57588_i0forward_frame_1 - 0.13 11.4 0.4 0.14 11.2 0.4 1.0 1 0 0 1 1 1 0 TMEM192 family F-box-like PF12937.7 NODE_65527_length_244_cov_54.014354_g57586_i0forward_frame_1 - 0.0019 18.0 0.1 0.0027 17.5 0.1 1.3 1 0 0 1 1 1 1 F-box-like PPR PF01535.20 NODE_65525_length_244_cov_57.129187_g57584_i0forward_frame_1 - 0.077 13.3 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 PPR repeat Pox_A51 PF04948.13 NODE_65521_length_244_cov_66.866029_g57580_i0forward_frame_1 - 0.19 10.6 1.1 0.21 10.4 1.1 1.0 1 0 0 1 1 1 0 Poxvirus A51 protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks292.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks292.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks292.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks292.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cylicin_N PF15241.6 NODE_65520_length_244_cov_67.622010_g57579_i0forward_frame_1 - 0.09 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Cylicin N-terminus Glyco_transf_56 PF07429.11 NODE_65519_length_244_cov_67.990431_g57578_i0reverse_frame_1 - 0.0054 15.9 0.1 0.0058 15.8 0.1 1.0 1 0 0 1 1 1 1 4-alpha-L-fucosyltransferase glycosyl transferase group 56 FTO_CTD PF12934.7 NODE_65514_length_244_cov_75.339713_g57573_i0reverse_frame_1 - 0.026 14.3 0.1 0.031 14.0 0.1 1.1 1 0 0 1 1 1 0 FTO C-terminal domain Ephrin_rec_like PF07699.13 NODE_65514_length_244_cov_75.339713_g57573_i0reverse_frame_1 - 0.09 12.5 0.3 0.15 11.9 0.0 1.6 2 0 0 2 2 2 0 Putative ephrin-receptor like DUF3899 PF13038.6 NODE_65513_length_244_cov_76.311005_g57572_i0forward_frame_1 - 0.012 16.1 0.6 0.016 15.7 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3899) SVM_signal PF12113.8 NODE_65513_length_244_cov_76.311005_g57572_i0forward_frame_1 - 0.032 14.1 2.5 0.054 13.4 2.5 1.4 1 0 0 1 1 1 0 SVM protein signal sequence Orf78 PF06024.12 NODE_65513_length_244_cov_76.311005_g57572_i0forward_frame_1 - 0.039 14.3 0.2 0.045 14.0 0.2 1.2 1 0 0 1 1 1 0 Orf78 (ac78) ERp29_N PF07912.13 NODE_65513_length_244_cov_76.311005_g57572_i0forward_frame_1 - 0.17 12.0 1.5 0.22 11.7 0.3 1.7 1 1 1 2 2 2 0 ERp29, N-terminal domain BIRC6 PF12356.8 NODE_65506_length_244_cov_109.598086_g57565_i0reverse_frame_1 - 0.13 11.7 0.1 0.14 11.6 0.1 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 EF-hand_7 PF13499.6 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 9.2e-07 29.2 0.1 1.2e-06 28.8 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 4.2e-06 25.9 0.5 0.00039 19.8 0.2 2.2 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 1.1e-05 25.2 0.2 1.6e-05 24.6 0.2 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 0.00018 21.2 0.2 0.0084 16.0 0.1 2.3 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 0.027 14.0 0.1 0.027 14.0 0.1 1.9 2 0 0 2 2 2 0 EF hand Chromadorea_ALT PF05535.12 NODE_65499_length_244_cov_236.832536_g57558_i0forward_frame_1 - 0.027 14.7 0.8 0.034 14.3 0.8 1.3 1 0 0 1 1 1 0 Chromadorea ALT protein p450 PF00067.22 NODE_65494_length_244_cov_845.904306_g57553_i0reverse_frame_1 - 4.6e-10 38.8 0.0 4.7e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Coa1 PF08695.10 NODE_65494_length_244_cov_845.904306_g57553_i0reverse_frame_1 - 0.094 12.5 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 zinc_ribbon_5 PF13719.6 NODE_65489_length_245_cov_0.800000_g57548_i0forward_frame_1 - 0.047 13.4 0.1 11 5.9 0.0 2.1 1 1 1 2 2 2 0 zinc-ribbon domain RELT PF12606.8 NODE_65484_length_245_cov_0.957143_g57543_i0forward_frame_1 - 1.3 8.1 4.3 0.24 10.4 0.6 1.6 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 PGA2 PF07543.12 NODE_65479_length_245_cov_1.138095_g57538_i0reverse_frame_1 - 0.011 15.7 7.6 0.014 15.4 7.6 1.0 1 0 0 1 1 1 0 Protein trafficking PGA2 AAR2 PF05282.11 NODE_65478_length_245_cov_1.138095_g57537_i0reverse_frame_1 - 0.0073 15.8 0.2 0.0081 15.6 0.2 1.0 1 0 0 1 1 1 1 AAR2 protein DUF3096 PF11295.8 NODE_65474_length_245_cov_1.171429_g57533_i0reverse_frame_1 - 0.35 10.6 7.1 0.93 9.2 4.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3096) DUF2706 PF10913.8 NODE_65471_length_245_cov_1.228571_g57530_i0forward_frame_1 - 0.075 12.9 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2706) DUF4884 PF16225.5 NODE_65466_length_245_cov_1.261905_g57525_i0forward_frame_1 - 0.19 11.8 1.7 0.3 11.2 1.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4884) Complex1_51K PF01512.17 NODE_65463_length_245_cov_1.285714_g57522_i0reverse_frame_1 - 1.1e-20 74.0 0.0 1.2e-20 73.9 0.0 1.0 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit MH2 PF03166.14 NODE_65457_length_245_cov_1.328571_g57516_i0forward_frame_1 - 0.014 15.7 0.1 0.016 15.5 0.1 1.1 1 0 0 1 1 1 0 MH2 domain Cyclin_C PF02984.19 NODE_65452_length_245_cov_1.380952_g57511_i0reverse_frame_1 - 0.025 14.6 0.2 0.04 14.0 0.2 1.4 1 1 0 1 1 1 0 Cyclin, C-terminal domain DUF4956 PF16316.5 NODE_65452_length_245_cov_1.380952_g57511_i0forward_frame_1 - 1.6 8.4 7.1 0.26 11.0 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4956) Kinesin PF00225.23 NODE_65451_length_245_cov_1.400000_g57510_i0reverse_frame_1 - 1.4e-17 63.7 0.1 1.4e-17 63.6 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_65451_length_245_cov_1.400000_g57510_i0reverse_frame_1 - 0.015 15.2 0.1 0.022 14.7 0.1 1.3 1 0 0 1 1 1 0 Microtubule binding Pox_E10 PF04805.12 NODE_65441_length_245_cov_1.519048_g57500_i0forward_frame_1 - 0.056 13.3 0.9 0.092 12.6 0.9 1.4 1 0 0 1 1 1 0 E10-like protein conserved region Cucumo_2B PF03263.13 NODE_65436_length_245_cov_1.552381_g57495_i0reverse_frame_1 - 0.19 12.2 2.0 0.3 11.5 2.0 1.4 1 0 0 1 1 1 0 Cucumovirus protein 2B DUF1201 PF06716.11 NODE_65434_length_245_cov_1.580952_g57493_i0forward_frame_1 - 0.00018 21.5 0.3 0.0003 20.7 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1201) Peptidase_S49 PF01343.18 NODE_65429_length_245_cov_1.709524_g57488_i0forward_frame_1 - 4e-26 91.8 0.0 4.5e-26 91.6 0.0 1.0 1 0 0 1 1 1 1 Peptidase family S49 Tudor_2 PF18104.1 NODE_65429_length_245_cov_1.709524_g57488_i0forward_frame_1 - 0.095 12.4 0.1 8.1 6.2 0.0 2.3 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain Hydrolase_3 PF08282.12 NODE_65420_length_245_cov_1.814286_g57479_i0forward_frame_1 - 0.00025 20.9 0.1 0.0003 20.6 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 NODE_65420_length_245_cov_1.814286_g57479_i0forward_frame_1 - 0.0032 17.8 0.0 0.0033 17.8 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Pkinase PF00069.25 NODE_65419_length_245_cov_1.828571_g57478_i0forward_frame_1 - 1.8e-16 60.3 0.0 2e-16 60.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_65419_length_245_cov_1.828571_g57478_i0forward_frame_1 - 5.9e-05 22.5 0.1 6.7e-05 22.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3583 PF12126.8 NODE_65418_length_245_cov_1.833333_g57477_i0forward_frame_1 - 0.12 11.8 1.9 0.13 11.6 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3583) JAKMIP_CC3 PF16034.5 NODE_65414_length_245_cov_1.890476_g57473_i0forward_frame_1 - 0.042 13.8 0.0 0.051 13.5 0.0 1.1 1 0 0 1 1 1 0 JAKMIP CC3 domain Deltaretro_Tax PF05599.11 NODE_65412_length_245_cov_1.900000_g57471_i0forward_frame_1 - 0.11 13.0 2.5 0.2 12.2 2.3 1.6 1 1 0 1 1 1 0 Deltaretrovirus Tax protein Rep_fac-A_C PF08646.10 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 1.4e-20 73.5 0.8 1.5e-20 73.4 0.8 1.0 1 0 0 1 1 1 1 Replication factor-A C terminal domain DUF3797 PF12677.7 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.011 15.6 0.1 0.018 14.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) CDC24_OB3 PF17244.2 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.023 14.4 0.0 0.024 14.4 0.0 1.0 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 PADR1 PF08063.12 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.024 14.4 3.0 0.048 13.4 3.0 1.4 1 0 0 1 1 1 0 PADR1 (NUC008) domain Ribosomal_L37ae PF01780.19 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.025 14.7 0.2 0.03 14.4 0.2 1.2 1 0 0 1 1 1 0 Ribosomal L37ae protein family TackOD1 PF18551.1 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.025 14.3 0.4 0.031 14.0 0.4 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 zinc-ribbons_6 PF07191.12 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.047 13.7 0.8 0.066 13.2 0.8 1.2 1 0 0 1 1 1 0 zinc-ribbons CpXC PF14353.6 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.068 13.2 1.4 0.99 9.5 0.0 2.0 1 1 1 2 2 2 0 CpXC protein zf-TFIIB PF13453.6 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.1 11.9 0.8 0.15 11.4 0.8 1.3 1 0 0 1 1 1 0 Transcription factor zinc-finger zf-H2C2_2 PF13465.6 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.54 10.8 3.0 7.9 7.1 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf_UBZ PF18439.1 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.69 9.6 3.0 8.7 6.0 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger SVA PF05326.11 NODE_65404_length_245_cov_2.104762_g57463_i0forward_frame_1 - 0.35 10.9 3.5 0.41 10.6 3.3 1.4 1 1 0 1 1 1 0 Seminal vesicle autoantigen (SVA) TMIE PF16038.5 NODE_65403_length_245_cov_2.128571_g57462_i0reverse_frame_1 - 1 9.3 5.2 0.42 10.5 2.9 1.6 1 1 1 2 2 2 0 TMIE protein DEAD PF00270.29 NODE_65400_length_245_cov_2.233333_g57459_i0reverse_frame_1 - 9.2e-17 61.4 0.0 1e-16 61.2 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 NODE_65400_length_245_cov_2.233333_g57459_i0reverse_frame_1 - 0.017 15.1 0.0 0.02 14.9 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit SecA_DEAD PF07517.14 NODE_65400_length_245_cov_2.233333_g57459_i0reverse_frame_1 - 0.28 10.5 0.1 0.33 10.2 0.1 1.1 1 0 0 1 1 1 0 SecA DEAD-like domain DUF4483 PF14825.6 NODE_65399_length_245_cov_2.285714_g57458_i0reverse_frame_1 - 0.017 14.9 0.0 0.02 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4483) Asp_protease_2 PF13650.6 NODE_65387_length_245_cov_2.585714_g57446_i0forward_frame_1 - 0.003 18.2 0.0 0.0035 18.0 0.0 1.1 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 NODE_65387_length_245_cov_2.585714_g57446_i0forward_frame_1 - 0.026 15.1 0.0 0.033 14.8 0.0 1.1 1 0 0 1 1 1 0 gag-polyprotein putative aspartyl protease DeoRC PF00455.22 NODE_65378_length_245_cov_2.876190_g57437_i0reverse_frame_1 - 3.5e-12 46.5 0.0 4.2e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 NODE_65378_length_245_cov_2.876190_g57437_i0reverse_frame_1 - 0.0059 16.3 0.1 0.0085 15.8 0.1 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain CAF1 PF04857.20 NODE_65372_length_245_cov_3.195238_g57431_i0forward_frame_1 - 0.13 11.4 0.3 0.14 11.3 0.3 1.0 1 0 0 1 1 1 0 CAF1 family ribonuclease RGP PF03214.13 NODE_65370_length_245_cov_3.533333_g57429_i0forward_frame_1 - 0.05 12.8 0.0 0.05 12.8 0.0 1.1 1 0 0 1 1 1 0 Reversibly glycosylated polypeptide cEGF PF12662.7 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 8e-06 25.7 12.4 0.0069 16.3 0.2 3.0 3 0 0 3 3 3 2 Complement Clr-like EGF-like DUF4215 PF13948.6 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.0016 18.8 13.4 0.014 15.8 1.5 3.0 2 1 1 3 3 3 2 Domain of unknown function (DUF4215) ANATO PF01821.18 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.0039 18.0 5.1 2.2 9.2 0.1 3.2 3 0 0 3 3 3 2 Anaphylotoxin-like domain MSL2-CXC PF16682.5 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.022 14.9 16.5 0.15 12.2 3.5 2.2 1 1 1 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 PknG_rubred PF16919.5 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.054 13.7 5.8 0.85 9.8 0.5 2.1 1 1 0 2 2 2 0 Protein kinase G rubredoxin domain FXa_inhibition PF14670.6 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.1 12.9 20.5 0.25 11.6 7.9 2.2 1 1 1 2 2 2 0 Coagulation Factor Xa inhibitory site zf-RRPl_C4 PF17026.5 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.21 11.7 6.6 0.26 11.4 6.6 1.2 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type zinc_ribbon_4 PF13717.6 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.25 11.3 6.0 4.2 7.4 0.8 2.7 2 0 0 2 2 2 0 zinc-ribbon domain RANK_CRD_2 PF18278.1 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.31 11.2 5.4 5.7 7.2 0.5 2.4 2 0 0 2 2 2 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 JAMP PF05571.12 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 5.1 6.6 10.3 1.7 8.2 3.6 2.0 1 1 1 2 2 2 0 JNK1/MAPK8-associated membrane protein Antistasin PF02822.14 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 9.2 7.0 11.9 13 6.5 0.9 2.9 2 2 0 2 2 2 0 Antistasin family UL40 PF10682.9 NODE_65364_length_245_cov_5.128571_g57423_i0forward_frame_1 - 0.11 12.2 0.2 0.25 11.0 0.2 1.6 1 1 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 Staphopain_pro PF14731.6 NODE_65361_length_245_cov_18.028571_g57420_i0forward_frame_1 - 0.02 14.9 0.1 0.022 14.8 0.1 1.1 1 0 0 1 1 1 0 Staphopain proregion DPBB_1 PF03330.18 NODE_65349_length_245_cov_39.052381_g57408_i0reverse_frame_1 - 0.013 15.7 0.0 0.017 15.4 0.0 1.2 1 0 0 1 1 1 0 Lytic transglycolase DUF5403 PF17395.2 NODE_65341_length_245_cov_50.585714_g57400_i0reverse_frame_1 - 0.15 12.3 0.0 5.2 7.4 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5403) Trefoil PF00088.18 NODE_65339_length_245_cov_54.233333_g57398_i0reverse_frame_1 - 0.097 12.6 4.9 0.14 12.1 4.9 1.2 1 0 0 1 1 1 0 Trefoil (P-type) domain amfpi-1 PF12190.8 NODE_65339_length_245_cov_54.233333_g57398_i0forward_frame_1 - 0.089 13.4 0.0 0.095 13.3 0.0 1.1 1 0 0 1 1 1 0 Fungal protease inhibitor IQ PF00612.27 NODE_65331_length_245_cov_61.780952_g57390_i0reverse_frame_1 - 0.00095 18.8 5.3 0.057 13.2 0.0 2.6 3 0 0 3 3 3 2 IQ calmodulin-binding motif DUF5097 PF17020.5 NODE_65331_length_245_cov_61.780952_g57390_i0reverse_frame_1 - 0.022 15.1 0.7 0.026 14.8 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5097) DEPP PF15343.6 NODE_65323_length_245_cov_82.495238_g57382_i0reverse_frame_1 - 0.34 11.0 2.8 0.39 10.8 2.8 1.2 1 0 0 1 1 1 0 Decidual protein induced by progesterone family Spin-Ssty PF02513.17 NODE_65321_length_245_cov_83.323810_g57380_i0forward_frame_1 - 0.0089 15.7 0.2 1.2 9.0 0.0 2.2 2 0 0 2 2 2 2 Spin/Ssty Family HmuY PF14064.6 NODE_65320_length_245_cov_86.519048_g57379_i0forward_frame_1 - 0.063 13.5 0.0 0.075 13.3 0.0 1.1 1 0 0 1 1 1 0 HmuY protein zf-LITAF-like PF10601.9 NODE_65318_length_245_cov_98.985714_g57377_i0forward_frame_1 - 1 9.7 6.9 2 8.7 6.9 1.5 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain PHD_3 PF13922.6 NODE_65312_length_245_cov_134.280952_g57371_i0reverse_frame_1 - 0.053 13.9 1.2 0.062 13.7 1.2 1.2 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx Tfb4 PF03850.14 NODE_65308_length_245_cov_190.495238_g57367_i0reverse_frame_1 - 0.083 12.4 0.1 0.083 12.4 0.1 1.0 1 0 0 1 1 1 0 Transcription factor Tfb4 SCIMP PF15050.6 NODE_65303_length_245_cov_2418.600000_g57362_i0reverse_frame_1 - 0.023 15.1 0.3 0.033 14.6 0.3 1.2 1 0 0 1 1 1 0 SCIMP protein DUF4440 PF14534.6 NODE_65296_length_246_cov_1.047393_g57355_i0forward_frame_1 - 0.012 16.0 0.0 0.013 15.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) mTERF PF02536.14 NODE_65296_length_246_cov_1.047393_g57355_i0forward_frame_1 - 0.017 14.1 0.0 0.017 14.0 0.0 1.0 1 0 0 1 1 1 0 mTERF DUF3109 PF11307.8 NODE_65288_length_246_cov_1.132701_g57347_i0reverse_frame_1 - 0.07 12.9 0.0 0.098 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3109) DUF1410 PF07198.11 NODE_65286_length_246_cov_1.137441_g57345_i0reverse_frame_1 - 0.28 11.7 1.5 24 5.5 0.2 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1410) DUF1461 PF07314.11 NODE_65279_length_246_cov_1.246445_g57338_i0forward_frame_1 - 0.037 14.0 1.2 0.042 13.8 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) DUF4658 PF15555.6 NODE_65269_length_246_cov_1.412322_g57328_i0forward_frame_1 - 0.071 13.2 1.4 0.095 12.8 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) FAM221 PF14753.6 NODE_65260_length_246_cov_1.516588_g57319_i0forward_frame_1 - 0.75 9.3 7.3 0.83 9.2 7.3 1.1 1 0 0 1 1 1 0 Protein FAM221A/B PH_RBD PF12068.8 NODE_65256_length_246_cov_1.549763_g57315_i0forward_frame_1 - 0.12 11.8 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 Rab-binding domain (RBD) DUF1263 PF06882.12 NODE_65253_length_246_cov_1.563981_g57312_i0forward_frame_1 - 0.074 13.1 0.6 1 9.5 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1263) GTP_EFTU PF00009.27 NODE_65236_length_246_cov_1.848341_g57295_i0reverse_frame_1 - 7.6e-20 71.3 0.1 8.6e-20 71.1 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain DUF1746 PF08508.10 NODE_65231_length_246_cov_1.914692_g57290_i0reverse_frame_1 - 0.024 15.0 0.6 0.026 14.9 0.6 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1746) MRP PF09387.10 NODE_65226_length_246_cov_1.981043_g57285_i0forward_frame_1 - 0.16 11.9 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial RNA binding protein MRP CobT PF06213.12 NODE_65225_length_246_cov_1.995261_g57284_i0reverse_frame_1 - 7.2 5.9 13.3 7.7 5.8 13.3 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT MIX PF18529.1 NODE_65223_length_246_cov_2.004739_g57282_i0forward_frame_1 - 0.079 12.7 0.1 0.092 12.4 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins IL6Ra-bind PF09240.10 NODE_65221_length_246_cov_2.037915_g57280_i0forward_frame_1 - 0.045 14.2 0.0 0.049 14.1 0.0 1.1 1 0 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding DUF1168 PF06658.12 NODE_65217_length_246_cov_2.080569_g57276_i0forward_frame_1 - 0.059 13.2 0.0 0.073 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) RVT_2 PF07727.14 NODE_65208_length_246_cov_2.284360_g57267_i0reverse_frame_1 - 8.1e-11 42.0 0.0 8.4e-11 42.0 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) TMEM71 PF15121.6 NODE_65205_length_246_cov_2.417062_g57264_i0forward_frame_1 - 0.15 11.7 0.2 0.17 11.5 0.2 1.2 1 0 0 1 1 1 0 TMEM71 protein family Lamprin PF06403.11 NODE_65202_length_246_cov_2.469194_g57261_i0forward_frame_1 - 0.044 13.7 0.9 0.06 13.3 0.9 1.2 1 0 0 1 1 1 0 Lamprin TraV PF09676.10 NODE_65190_length_246_cov_2.886256_g57249_i0forward_frame_1 - 0.13 13.2 0.4 0.18 12.7 0.4 1.2 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) Pkinase PF00069.25 NODE_65186_length_246_cov_2.976303_g57245_i0forward_frame_1 - 1.5e-12 47.5 0.1 1.6e-12 47.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_65186_length_246_cov_2.976303_g57245_i0forward_frame_1 - 0.00011 21.6 0.0 0.00012 21.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DnaJ PF00226.31 NODE_65182_length_246_cov_3.094787_g57241_i0forward_frame_1 - 2.9e-19 69.0 2.4 4.2e-19 68.4 2.4 1.3 1 0 0 1 1 1 1 DnaJ domain HALZ PF02183.18 NODE_65182_length_246_cov_3.094787_g57241_i0forward_frame_1 - 0.054 13.7 1.6 10 6.4 0.1 2.7 2 1 0 2 2 2 0 Homeobox associated leucine zipper PPO1_DWL PF12142.8 NODE_65182_length_246_cov_3.094787_g57241_i0forward_frame_1 - 0.065 13.0 0.3 0.13 12.1 0.2 1.5 2 0 0 2 2 2 0 Polyphenol oxidase middle domain CPP1-like PF11833.8 NODE_65182_length_246_cov_3.094787_g57241_i0forward_frame_1 - 0.27 10.9 0.6 0.3 10.7 0.6 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF4547 PF15080.6 NODE_65176_length_246_cov_6.056872_g57235_i0forward_frame_1 - 0.14 11.8 0.2 3 7.5 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4547) DUF2157 PF09925.9 NODE_65169_length_246_cov_41.127962_g57228_i0reverse_frame_1 - 0.042 13.6 0.5 0.042 13.6 0.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) AraC_binding_2 PF14525.6 NODE_65166_length_246_cov_44.767773_g57225_i0forward_frame_1 - 0.13 11.9 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 AraC-binding-like domain N_Asn_amidohyd PF14736.6 NODE_65148_length_246_cov_67.943128_g57207_i0forward_frame_1 - 0.02 14.1 0.0 0.021 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein N-terminal asparagine amidohydrolase ISP1_C PF18161.1 NODE_65142_length_246_cov_75.251185_g57201_i0reverse_frame_1 - 0.033 14.2 0.3 0.039 13.9 0.3 1.1 1 0 0 1 1 1 0 ISP1 C-terminal FAM27 PF15832.5 NODE_65136_length_246_cov_92.412322_g57195_i0forward_frame_1 - 1.5 9.4 5.9 0.78 10.3 0.2 2.0 1 1 1 2 2 2 0 FAM27 D and E protein family CoA_binding_3 PF13727.6 NODE_65132_length_246_cov_108.327014_g57191_i0forward_frame_1 - 0.56 10.2 5.5 0.65 10.0 5.5 1.0 1 0 0 1 1 1 0 CoA-binding domain LacY_symp PF01306.19 NODE_65130_length_246_cov_113.369668_g57189_i0forward_frame_1 - 0.31 9.8 1.3 0.33 9.7 1.3 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter DUF4636 PF15468.6 NODE_65128_length_246_cov_141.720379_g57187_i0reverse_frame_1 - 0.11 12.2 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) DUF3446 PF11928.8 NODE_65127_length_246_cov_147.649289_g57186_i0reverse_frame_1 - 0.45 10.8 15.6 0.6 10.4 15.6 1.3 1 0 0 1 1 1 0 Early growth response N-terminal domain SR-25 PF10500.9 NODE_65127_length_246_cov_147.649289_g57186_i0reverse_frame_1 - 9.7 5.7 25.0 11 5.5 25.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3951 PF13131.6 NODE_65126_length_246_cov_157.327014_g57185_i0forward_frame_1 - 0.18 12.1 3.1 0.32 11.2 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3951) DUF1211 PF06736.11 NODE_65124_length_246_cov_166.033175_g57183_i0forward_frame_1 - 0.055 13.9 1.2 0.063 13.7 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) DUF1593 PF07632.11 NODE_65119_length_246_cov_2563.758294_g57178_i0reverse_frame_1 - 0.18 11.2 0.0 0.21 11.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1593) Mem_trans PF03547.18 NODE_65117_length_246_cov_3702.625592_g57176_i0reverse_frame_1 - 0.00034 19.1 1.0 0.0004 18.9 1.0 1.1 1 0 0 1 1 1 1 Membrane transport protein DUF702 PF05142.12 NODE_65113_length_247_cov_0.834906_g57172_i0reverse_frame_2 - 0.096 13.2 1.0 4.1 7.9 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF702) Neisseria_TspB PF05616.13 NODE_65111_length_247_cov_0.891509_g57170_i0reverse_frame_2 - 2.4 6.5 3.2 2.7 6.4 3.2 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Peptidase_M14 PF00246.24 NODE_65110_length_247_cov_0.938679_g57169_i0reverse_frame_3 - 0.00058 19.7 0.0 0.00062 19.7 0.0 1.0 1 0 0 1 1 1 1 Zinc carboxypeptidase AstE_AspA PF04952.14 NODE_65110_length_247_cov_0.938679_g57169_i0reverse_frame_3 - 0.0043 16.2 0.0 0.005 16.0 0.0 1.1 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family zf-C5HC2 PF02928.16 NODE_65110_length_247_cov_0.938679_g57169_i0forward_frame_3 - 0.12 12.8 1.9 0.21 12.0 1.9 1.4 1 0 0 1 1 1 0 C5HC2 zinc finger TraS PF10624.9 NODE_65109_length_247_cov_0.938679_g57168_i0reverse_frame_3 - 0.066 13.1 0.0 0.069 13.1 0.0 1.2 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS HEPN_AbiA_CTD PF18732.1 NODE_65108_length_247_cov_0.938679_g57167_i0reverse_frame_3 - 0.0066 16.4 0.7 0.0077 16.2 0.7 1.1 1 0 0 1 1 1 1 HEPN like, Abia C-terminal domain Inhibitor_I36 PF03995.13 NODE_65108_length_247_cov_0.938679_g57167_i0reverse_frame_3 - 0.038 13.9 0.1 0.045 13.7 0.1 1.1 1 0 0 1 1 1 0 Peptidase inhibitor family I36 zf-C2H2_11 PF16622.5 NODE_65107_length_247_cov_0.938679_g57166_i0reverse_frame_2 - 0.096 12.5 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 zinc-finger C2H2-type DUF3915 PF13054.6 NODE_65103_length_247_cov_1.047170_g57162_i0forward_frame_3 - 0.035 14.1 0.9 0.039 13.9 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF3915 PF13054.6 NODE_65103_length_247_cov_1.047170_g57162_i0forward_frame_2 - 0.15 12.1 0.8 0.17 11.9 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) SNURF PF07192.11 NODE_65098_length_247_cov_1.117925_g57157_i0forward_frame_2 - 0.033 14.0 0.1 0.047 13.5 0.1 1.3 1 0 0 1 1 1 0 SNURF/RPN4 protein BRI3BP PF14965.6 NODE_65095_length_247_cov_1.127358_g57154_i0reverse_frame_3 - 0.057 12.9 0.0 0.065 12.8 0.0 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 HTH_36 PF13730.6 NODE_65089_length_247_cov_1.141509_g57148_i0reverse_frame_3 - 0.12 12.4 0.2 0.18 11.8 0.2 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain SelK_SelG PF10961.8 NODE_65088_length_247_cov_1.160377_g57147_i0forward_frame_3 - 0.33 11.6 2.7 0.37 11.4 2.7 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG TYA PF01021.19 NODE_65085_length_247_cov_1.165094_g57144_i0forward_frame_2 - 5.6 7.4 9.8 0.87 10.0 3.1 2.0 1 1 1 2 2 2 0 TYA transposon protein DNA_gyraseA_C PF03989.13 NODE_65073_length_247_cov_1.325472_g57132_i0reverse_frame_2 - 0.27 10.7 0.5 0.4 10.2 0.5 1.2 1 0 0 1 1 1 0 DNA gyrase C-terminal domain, beta-propeller SK_channel PF03530.14 NODE_65071_length_247_cov_1.344340_g57130_i0reverse_frame_3 - 0.038 14.0 2.8 0.042 13.8 2.8 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel U79_P34 PF03064.16 NODE_65066_length_247_cov_1.443396_g57125_i0reverse_frame_3 - 0.054 12.9 10.6 0.062 12.7 10.6 1.1 1 0 0 1 1 1 0 HSV U79 / HCMV P34 BIRC6 PF12356.8 NODE_65066_length_247_cov_1.443396_g57125_i0reverse_frame_3 - 0.35 10.3 1.7 0.4 10.1 1.7 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 Ac81 PF05820.11 NODE_65066_length_247_cov_1.443396_g57125_i0forward_frame_3 - 0.96 9.0 5.1 1.1 8.8 5.1 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 GBV-C_env PF12786.7 NODE_65066_length_247_cov_1.443396_g57125_i0forward_frame_3 - 1.3 7.6 3.7 1.4 7.5 3.7 1.1 1 0 0 1 1 1 0 GB virus C genotype envelope MMPL PF03176.15 NODE_65066_length_247_cov_1.443396_g57125_i0forward_frame_3 - 5.3 5.9 8.3 6 5.7 8.3 1.0 1 0 0 1 1 1 0 MMPL family RecR PF02132.15 NODE_65066_length_247_cov_1.443396_g57125_i0forward_frame_2 - 0.14 11.7 4.2 0.32 10.6 4.2 1.6 1 0 0 1 1 1 0 RecR protein Acetyltransf_16 PF05301.11 NODE_65060_length_247_cov_1.504717_g57119_i0reverse_frame_3 - 0.034 13.9 0.0 0.044 13.5 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 MnhB PF04039.13 NODE_65058_length_247_cov_1.528302_g57117_i0forward_frame_3 - 0.15 12.4 0.1 0.17 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain related to MnhB subunit of Na+/H+ antiporter rve PF00665.26 NODE_65053_length_247_cov_1.575472_g57112_i0reverse_frame_3 - 5.1e-08 33.1 0.0 6.5e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 NODE_65053_length_247_cov_1.575472_g57112_i0reverse_frame_3 - 0.00051 19.8 0.0 0.00071 19.3 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain DUF2198 PF09964.9 NODE_65052_length_247_cov_1.599057_g57111_i0reverse_frame_3 - 0.15 12.1 10.1 0.23 11.6 3.3 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2198) NB PF04159.13 NODE_65052_length_247_cov_1.599057_g57111_i0reverse_frame_3 - 9.1 6.4 8.5 15 5.7 1.7 2.6 1 1 2 3 3 3 0 NB glycoprotein Beta_helix PF13229.6 NODE_65052_length_247_cov_1.599057_g57111_i0reverse_frame_2 - 0.0061 16.4 2.0 0.0068 16.3 2.0 1.1 1 0 0 1 1 1 1 Right handed beta helix region SSFA2_C PF14723.6 NODE_65050_length_247_cov_1.617925_g57109_i0reverse_frame_3 - 0.05 13.5 0.1 0.051 13.5 0.1 1.0 1 0 0 1 1 1 0 Sperm-specific antigen 2 C-terminus HCV_NS4b PF01001.19 NODE_65050_length_247_cov_1.617925_g57109_i0forward_frame_2 - 0.033 13.8 0.0 0.044 13.4 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS4b ABC_tran PF00005.27 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 3.6e-16 59.9 0.0 3.8e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 ABC transporter MMR_HSR1 PF01926.23 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.011 15.8 0.0 0.012 15.7 0.0 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF87 PF01935.17 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.011 15.8 0.1 0.011 15.8 0.1 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_21 PF13304.6 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.014 15.2 0.0 0.016 15.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.029 14.1 0.1 0.043 13.6 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_15 PF13175.6 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.043 13.5 0.1 0.045 13.5 0.1 1.0 1 0 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.047 12.9 0.0 0.054 12.7 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain Gtr1_RagA PF04670.12 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.085 12.2 0.1 0.091 12.1 0.1 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region AAA_10 PF12846.7 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.089 11.7 0.0 0.089 11.7 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain DUF815 PF05673.13 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.14 11.3 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_16 PF13191.6 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.16 12.4 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Mating_N PF12731.7 NODE_65048_length_247_cov_1.665094_g57107_i0forward_frame_3 - 0.035 14.2 0.2 0.045 13.9 0.2 1.3 1 1 0 1 1 1 0 Mating-type protein beta 1 Peptidase_M24 PF00557.24 NODE_65046_length_247_cov_1.688679_g57105_i0reverse_frame_2 - 7.9e-16 58.4 0.1 8.6e-16 58.2 0.1 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 zf-AD PF07776.15 NODE_65038_length_247_cov_1.792453_g57097_i0reverse_frame_2 - 0.035 14.3 0.1 0.041 14.1 0.1 1.1 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) Fer4_9 PF13187.6 NODE_65038_length_247_cov_1.792453_g57097_i0forward_frame_3 - 0.01 16.0 1.0 0.015 15.4 1.0 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain C_tripleX PF02363.19 NODE_65035_length_247_cov_1.806604_g57094_i0reverse_frame_2 - 0.035 14.4 1.9 0.055 13.8 1.9 1.3 1 0 0 1 1 1 0 Cysteine rich repeat LptD PF04453.14 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_3 - 0.048 12.9 0.1 0.048 12.9 0.1 1.0 1 0 0 1 1 1 0 LPS transport system D Pkinase PF00069.25 NODE_65029_length_247_cov_1.882075_g57088_i0forward_frame_2 - 0.004 16.5 0.0 0.005 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF3097 PF11296.8 NODE_65026_length_247_cov_1.910377_g57085_i0forward_frame_2 - 0.071 12.3 0.0 0.075 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3097) KxDL PF10241.9 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.00032 20.9 2.3 0.00035 20.8 2.3 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein Sec8_exocyst PF04048.14 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.003 17.5 0.8 0.0034 17.3 0.8 1.2 1 0 0 1 1 1 1 Sec8 exocyst complex component specific domain TACC_C PF05010.14 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.0038 17.0 3.2 0.0046 16.8 3.1 1.2 1 1 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal GAT PF03127.14 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.022 15.1 3.3 0.029 14.7 3.3 1.2 1 0 0 1 1 1 0 GAT domain PRKG1_interact PF15898.5 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.03 15.2 1.3 0.048 14.6 1.3 1.4 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Phage_Mu_Gam PF07352.12 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.049 13.5 2.6 0.074 13.0 2.6 1.2 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein THP2 PF09432.10 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.083 12.9 2.6 0.096 12.7 2.6 1.2 1 0 0 1 1 1 0 Tho complex subunit THP2 YabA PF06156.13 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.09 13.4 3.5 0.67 10.6 0.1 2.0 1 1 1 2 2 2 0 Initiation control protein YabA Mvb12 PF09452.10 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.13 12.7 3.0 8 7.0 1.6 2.6 1 1 1 2 2 2 0 ESCRT-I subunit Mvb12 TBCA PF02970.16 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.21 11.9 4.5 0.69 10.3 4.5 1.9 1 1 0 1 1 1 0 Tubulin binding cofactor A DUF4407 PF14362.6 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.26 10.6 3.7 0.28 10.5 3.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4094 PF13334.6 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.34 11.4 1.6 0.39 11.1 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) cNMP_binding PF00027.29 NODE_65021_length_247_cov_1.938679_g57080_i0reverse_frame_3 - 2.8e-09 36.9 0.0 3.1e-09 36.8 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain AC_N PF16214.5 NODE_65019_length_247_cov_1.948113_g57078_i0forward_frame_2 - 0.87 8.6 6.9 0.95 8.5 6.9 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF5013 PF16405.5 NODE_65016_length_247_cov_1.976415_g57075_i0forward_frame_3 - 0.038 14.3 0.3 0.043 14.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5013) PTN_MK_N PF05196.13 NODE_65015_length_247_cov_1.985849_g57074_i0reverse_frame_2 - 0.3 11.3 0.4 0.3 11.3 0.4 2.0 2 1 0 2 2 2 0 PTN/MK heparin-binding protein family, N-terminal domain Pex24p PF06398.11 NODE_65007_length_247_cov_2.193396_g57066_i0forward_frame_2 - 0.81 8.6 4.4 0.9 8.4 4.4 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin GPI PF06560.11 NODE_65005_length_247_cov_2.268868_g57064_i0forward_frame_3 - 0.15 11.3 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) zf_C2H2_ZHX PF18387.1 NODE_65005_length_247_cov_2.268868_g57064_i0forward_frame_3 - 0.16 11.6 0.6 0.33 10.6 0.1 1.8 2 0 0 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain CDP-OH_P_transf PF01066.21 NODE_65003_length_247_cov_2.287736_g57062_i0forward_frame_3 - 0.0072 17.1 0.1 0.012 16.4 0.1 1.4 1 0 0 1 1 1 1 CDP-alcohol phosphatidyltransferase TRF PF08558.10 NODE_65001_length_247_cov_2.311321_g57060_i0reverse_frame_3 - 0.032 13.8 1.3 0.037 13.6 1.3 1.0 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) E1_UFD PF09358.10 NODE_65001_length_247_cov_2.311321_g57060_i0forward_frame_3 - 0.0091 16.7 2.4 0.011 16.5 2.4 1.1 1 0 0 1 1 1 1 Ubiquitin fold domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks293.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks293.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks293.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks293.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:21 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase PF00069.25 NODE_65000_length_247_cov_2.320755_g57059_i0forward_frame_2 - 0.025 13.9 0.5 0.033 13.5 0.5 1.1 1 0 0 1 1 1 0 Protein kinase domain GCV_H PF01597.19 NODE_64998_length_247_cov_2.377358_g57057_i0reverse_frame_3 - 0.00042 20.2 0.1 0.00069 19.5 0.1 1.4 1 0 0 1 1 1 1 Glycine cleavage H-protein DUF2273 PF10031.9 NODE_64997_length_247_cov_2.382075_g57056_i0reverse_frame_3 - 0.38 10.8 5.4 8.5 6.5 0.2 2.4 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) DUF2603 PF10788.9 NODE_64995_length_247_cov_2.410377_g57054_i0reverse_frame_3 - 0.019 15.0 0.9 0.022 14.8 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2603) ER PF01133.17 NODE_64994_length_247_cov_2.424528_g57053_i0reverse_frame_3 - 4.5e-08 33.0 0.0 1.2e-07 31.7 0.0 1.6 2 0 0 2 2 2 1 Enhancer of rudimentary Thg1C PF14413.6 NODE_64994_length_247_cov_2.424528_g57053_i0forward_frame_2 - 0.15 12.3 0.0 0.26 11.5 0.0 1.4 1 1 0 1 1 1 0 Thg1 C terminal domain Microtub_bd PF16796.5 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 3.3e-06 27.1 0.3 3.3e-06 27.1 0.3 1.2 1 0 0 1 1 1 1 Microtubule binding Kinesin PF00225.23 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 3.8e-06 26.1 3.1 4.9e-06 25.7 3.1 1.4 1 1 0 1 1 1 1 Kinesin motor domain AAA_7 PF12775.7 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.0052 16.3 0.2 0.0063 16.0 0.2 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_24 PF13479.6 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.0066 16.2 0.1 0.0081 15.9 0.1 1.1 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.011 16.1 0.2 0.025 15.0 0.0 1.6 2 0 0 2 2 2 0 RNA helicase DUF87 PF01935.17 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.026 14.6 0.0 0.033 14.3 0.0 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain Zeta_toxin PF06414.12 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.028 13.7 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin TrwB_AAD_bind PF10412.9 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.064 12.2 0.1 0.075 11.9 0.1 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.13 12.6 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain Lamprin PF06403.11 NODE_64992_length_247_cov_2.466981_g57051_i0forward_frame_3 - 0.2 11.6 8.8 0.075 13.0 2.3 2.0 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_64992_length_247_cov_2.466981_g57051_i0forward_frame_2 - 6.9 6.6 9.9 2.9 7.9 1.4 2.1 1 1 1 2 2 2 0 Lamprin LisH_TPL PF17814.1 NODE_64991_length_247_cov_2.485849_g57050_i0reverse_frame_2 - 0.0033 17.0 0.2 0.0059 16.2 0.2 1.4 1 0 0 1 1 1 1 LisH-like dimerisation domain Skp1 PF01466.19 NODE_64990_length_247_cov_2.547170_g57049_i0reverse_frame_2 - 0.12 12.5 1.5 0.19 11.9 0.5 2.0 1 1 1 2 2 2 0 Skp1 family, dimerisation domain DUF1199 PF06712.11 NODE_64989_length_247_cov_2.551887_g57048_i0reverse_frame_3 - 0.039 14.0 0.0 0.076 13.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1199) Papilloma_E5A PF05776.12 NODE_64988_length_247_cov_2.556604_g57047_i0reverse_frame_2 - 0.013 15.9 0.1 0.016 15.6 0.1 1.2 1 0 0 1 1 1 0 Papillomavirus E5A protein Endosulfine PF04667.17 NODE_64986_length_247_cov_2.636792_g57045_i0reverse_frame_3 - 0.18 11.9 1.2 0.2 11.8 0.3 1.5 2 0 0 2 2 2 0 cAMP-regulated phosphoprotein/endosulfine conserved region eIF2A PF08662.11 NODE_64986_length_247_cov_2.636792_g57045_i0reverse_frame_2 - 7.2e-05 22.8 0.7 7.5e-05 22.7 0.7 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A ANAPC4_WD40 PF12894.7 NODE_64986_length_247_cov_2.636792_g57045_i0reverse_frame_2 - 0.0075 16.5 0.8 0.012 15.8 0.3 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 NODE_64986_length_247_cov_2.636792_g57045_i0reverse_frame_2 - 0.0079 17.0 0.1 0.099 13.6 0.0 2.0 2 0 0 2 2 2 1 WD domain, G-beta repeat CytB6-F_Fe-S PF08802.10 NODE_64983_length_247_cov_2.735849_g57042_i0reverse_frame_2 - 0.12 12.4 1.1 0.14 12.2 0.1 1.6 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit ZinT PF09223.11 NODE_64980_length_247_cov_2.820755_g57039_i0forward_frame_3 - 1.1e-31 110.1 2.3 1.2e-31 110.0 2.3 1.0 1 0 0 1 1 1 1 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ACOX PF01756.19 NODE_64979_length_247_cov_2.834906_g57038_i0reverse_frame_3 - 0.00063 19.3 0.1 0.00078 19.1 0.1 1.1 1 0 0 1 1 1 1 Acyl-CoA oxidase FoP_duplication PF13865.6 NODE_64974_length_247_cov_3.042453_g57033_i0reverse_frame_3 - 4.2 8.0 6.9 5.3 7.7 6.9 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 CDC24_OB3 PF17244.2 NODE_64967_length_247_cov_3.674528_g57026_i0forward_frame_2 - 0.13 11.9 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Ac76 PF05814.11 NODE_64966_length_247_cov_3.867925_g57025_i0reverse_frame_3 - 0.059 13.4 2.5 0.072 13.1 2.5 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) Ac81 PF05820.11 NODE_64966_length_247_cov_3.867925_g57025_i0reverse_frame_3 - 0.094 12.3 1.5 0.11 12.1 1.5 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 Ribosomal_L27e PF01777.18 NODE_64966_length_247_cov_3.867925_g57025_i0reverse_frame_2 - 0.037 14.4 0.6 0.056 13.8 0.4 1.4 1 1 0 1 1 1 0 Ribosomal L27e protein family OB_MalK PF17912.1 NODE_64965_length_247_cov_4.070755_g57024_i0reverse_frame_2 - 3.2e-08 34.3 0.1 6.3e-08 33.3 0.0 1.5 2 0 0 2 2 2 1 MalK OB fold domain TOBE_2 PF08402.10 NODE_64965_length_247_cov_4.070755_g57024_i0reverse_frame_2 - 0.0001 22.4 0.0 0.00014 21.9 0.0 1.3 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 NODE_64965_length_247_cov_4.070755_g57024_i0reverse_frame_2 - 0.00013 22.5 0.1 0.00026 21.5 0.0 1.5 2 0 0 2 2 2 1 CysA C-terminal regulatory domain DUF3924 PF13062.6 NODE_64962_length_247_cov_4.283019_g57021_i0reverse_frame_2 - 0.008 16.1 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3924) Phosducin PF02114.16 NODE_64962_length_247_cov_4.283019_g57021_i0reverse_frame_2 - 0.11 11.4 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 Phosducin DUF5571 PF17732.1 NODE_64962_length_247_cov_4.283019_g57021_i0forward_frame_2 - 0.069 12.6 0.1 0.07 12.6 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5571) CNOT11 PF10155.9 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_3 - 0.34 11.1 4.7 4.1 7.6 1.9 2.2 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 11 CNOT11 PF10155.9 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_2 - 0.47 10.6 7.8 2 8.6 1.3 2.4 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 11 DnaB PF00772.21 NODE_64955_length_247_cov_11.278302_g57014_i0forward_frame_2 - 0.017 15.2 0.0 0.02 14.9 0.0 1.1 1 0 0 1 1 1 0 DnaB-like helicase N terminal domain BRX PF08381.11 NODE_64954_length_247_cov_18.382075_g57013_i0reverse_frame_2 - 0.24 10.8 2.4 1.9 7.9 0.8 2.1 1 1 1 2 2 2 0 Transcription factor regulating root and shoot growth via Pin3 HTH_23 PF13384.6 NODE_64950_length_247_cov_36.183962_g57009_i0reverse_frame_3 - 0.011 15.5 0.1 0.044 13.6 0.0 1.9 2 0 0 2 2 2 0 Homeodomain-like domain DUF1003 PF06210.11 NODE_64939_length_247_cov_52.033019_g56998_i0forward_frame_3 - 0.24 11.5 2.3 0.3 11.2 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) Phtf-FEM1B_bdg PF12129.8 NODE_64937_length_247_cov_53.698113_g56996_i0reverse_frame_3 - 0.054 13.3 0.2 0.064 13.1 0.2 1.2 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor CAP_N PF01213.19 NODE_64937_length_247_cov_53.698113_g56996_i0reverse_frame_2 - 0.55 9.7 4.7 0.58 9.6 4.7 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal TRM13 PF05206.14 NODE_64933_length_247_cov_56.617925_g56992_i0reverse_frame_2 - 3.1e-09 36.8 0.0 3.8e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase TRM13 OAD_gamma PF04277.13 NODE_64929_length_247_cov_63.490566_g56988_i0reverse_frame_3 - 0.012 16.2 1.3 0.012 16.2 1.3 1.5 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain RCC1_2 PF13540.6 NODE_64927_length_247_cov_64.358491_g56986_i0reverse_frame_3 - 1.5e-10 40.6 0.6 2.8e-10 39.7 0.6 1.4 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_64927_length_247_cov_64.358491_g56986_i0reverse_frame_3 - 0.019 15.6 0.6 1.7 9.3 0.0 2.3 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat DUF2805 PF10985.8 NODE_64924_length_247_cov_66.094340_g56983_i0reverse_frame_3 - 0.0028 18.0 0.3 0.0037 17.6 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2805) DIMCO_N PF16844.5 NODE_64924_length_247_cov_66.094340_g56983_i0reverse_frame_3 - 0.08 13.3 0.2 0.1 13.0 0.2 1.1 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor, N-terminal RELT PF12606.8 NODE_64924_length_247_cov_66.094340_g56983_i0reverse_frame_2 - 1.4 8.0 3.8 2.1 7.4 3.8 1.3 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Pertussis_S2S3 PF02918.15 NODE_64923_length_247_cov_71.056604_g56982_i0reverse_frame_2 - 0.075 13.0 0.1 0.084 12.8 0.1 1.1 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain TBD PF12845.7 NODE_64922_length_247_cov_72.542453_g56981_i0reverse_frame_3 - 0.16 11.9 0.1 0.22 11.4 0.1 1.2 1 0 0 1 1 1 0 TBD domain DUF1327 PF07041.11 NODE_64922_length_247_cov_72.542453_g56981_i0reverse_frame_2 - 0.044 13.8 0.0 0.051 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1327) Caskin-tail PF16632.5 NODE_64922_length_247_cov_72.542453_g56981_i0reverse_frame_2 - 0.14 12.5 1.2 0.53 10.7 1.2 1.8 1 1 0 1 1 1 0 C-terminal region of Caskin DUF4428 PF14471.6 NODE_64921_length_247_cov_72.801887_g56980_i0reverse_frame_2 - 0.022 14.7 0.5 0.047 13.6 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4428) CBP4 PF07960.11 NODE_64917_length_247_cov_81.938679_g56976_i0reverse_frame_3 - 0.089 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 CBP4 Imm57 PF15596.6 NODE_64917_length_247_cov_81.938679_g56976_i0forward_frame_2 - 0.071 13.4 0.0 0.086 13.2 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 57 DUF2205 PF10224.9 NODE_64911_length_247_cov_125.386792_g56970_i0forward_frame_3 - 0.028 14.4 0.2 0.037 14.0 0.2 1.2 1 0 0 1 1 1 0 Short coiled-coil protein KNOX1 PF03790.13 NODE_64908_length_247_cov_134.792453_g56967_i0forward_frame_3 - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 KNOX1 domain DUF1590 PF07629.11 NODE_64905_length_247_cov_245.735849_g56964_i0forward_frame_2 - 0.082 12.7 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1590) CdhC PF03598.15 NODE_64905_length_247_cov_245.735849_g56964_i0forward_frame_2 - 0.2 11.5 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase complex beta subunit DUF5514 PF17633.2 NODE_64900_length_247_cov_50511.400943_g56959_i0forward_frame_3 - 0.016 15.5 0.0 0.018 15.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5514) CoA_binding_2 PF13380.6 NODE_64899_length_248_cov_0.751174_g56958_i0forward_frame_2 - 0.099 13.1 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 CoA binding domain rpo30_N PF12410.8 NODE_64895_length_248_cov_0.934272_g56954_i0reverse_frame_2 - 0.0067 16.3 0.2 0.0075 16.2 0.2 1.2 1 0 0 1 1 1 1 Poxvirus DNA dependent RNA polymerase 30kDa subunit Glyco_hydro_28 PF00295.17 NODE_64888_length_248_cov_1.093897_g56947_i0forward_frame_3 - 0.0013 17.8 0.4 0.0015 17.7 0.4 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 BA14K PF07886.11 NODE_64886_length_248_cov_1.122066_g56945_i0forward_frame_2 - 0.037 13.9 0.2 0.037 13.9 0.2 1.9 2 0 0 2 2 2 0 BA14K-like protein Glu_synthase PF01645.17 NODE_64885_length_248_cov_1.126761_g56944_i0reverse_frame_2 - 0.23 10.5 0.0 0.27 10.3 0.0 1.0 1 0 0 1 1 1 0 Conserved region in glutamate synthase RIFIN PF02009.16 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.0024 17.8 1.9 0.0025 17.8 1.9 1.1 1 0 0 1 1 1 1 Rifin TMEM154 PF15102.6 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.003 17.5 3.1 0.003 17.5 3.1 1.1 1 0 0 1 1 1 1 TMEM154 protein family vMSA PF00695.19 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.017 14.2 0.5 0.019 14.1 0.5 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF3433 PF11915.8 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.028 14.9 0.2 0.041 14.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3433) Orf78 PF06024.12 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.033 14.5 2.5 0.041 14.2 2.5 1.2 1 0 0 1 1 1 0 Orf78 (ac78) DUF2207 PF09972.9 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.087 11.6 0.8 0.078 11.7 0.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5383 PF17355.2 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.22 11.9 2.5 0.29 11.5 2.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Shisa PF13908.6 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.26 11.5 1.1 0.26 11.5 1.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Stevor PF17410.2 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.54 9.8 4.3 0.62 9.6 4.3 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame EssA PF10661.9 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.69 9.8 2.5 0.83 9.5 2.5 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA MMPL PF03176.15 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 1.2 8.0 7.6 1.4 7.7 7.6 1.1 1 0 0 1 1 1 0 MMPL family DUF3377 PF11857.8 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 2.7 8.0 14.6 7.9 6.5 14.6 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3377) Antimicrobial12 PF08107.11 NODE_64878_length_248_cov_1.220657_g56937_i0reverse_frame_2 - 0.052 13.3 0.4 2.5 7.9 0.0 2.8 2 1 1 3 3 3 0 Pleurocidin family Kelch_5 PF13854.6 NODE_64876_length_248_cov_1.262911_g56935_i0forward_frame_2 - 4.2e-06 26.6 0.0 6.7e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 NODE_64876_length_248_cov_1.262911_g56935_i0forward_frame_2 - 0.00012 22.0 0.5 0.019 14.9 0.1 2.3 2 1 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_64876_length_248_cov_1.262911_g56935_i0forward_frame_2 - 0.00099 19.3 1.3 0.0037 17.5 0.0 2.2 2 1 0 2 2 2 1 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_64876_length_248_cov_1.262911_g56935_i0forward_frame_2 - 0.016 15.2 0.3 0.67 10.0 0.2 2.3 2 1 0 2 2 2 0 Kelch motif Microvir_J PF04726.13 NODE_64873_length_248_cov_1.291080_g56932_i0reverse_frame_2 - 4.4 7.4 7.1 1.4 8.9 0.2 2.5 3 0 0 3 3 3 0 Microvirus J protein AID PF18767.1 NODE_64872_length_248_cov_1.295775_g56931_i0forward_frame_2 - 0.016 15.2 0.7 0.021 14.8 0.7 1.3 1 0 0 1 1 1 0 Activation induced deaminase Filamin PF00630.19 NODE_64871_length_248_cov_1.305164_g56930_i0reverse_frame_3 - 0.00093 20.0 0.6 0.0011 19.7 0.6 1.1 1 0 0 1 1 1 1 Filamin/ABP280 repeat Invasin_D3 PF09134.10 NODE_64871_length_248_cov_1.305164_g56930_i0reverse_frame_3 - 0.017 15.4 0.1 0.059 13.7 0.1 1.7 1 1 0 1 1 1 0 Invasin, domain 3 DUF5530 PF17670.1 NODE_64870_length_248_cov_1.309859_g56929_i0reverse_frame_2 - 0.12 12.2 0.2 0.14 12.0 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5530) DASH_Dam1 PF08653.10 NODE_64867_length_248_cov_1.314554_g56926_i0reverse_frame_2 - 0.026 14.3 0.2 0.04 13.7 0.2 1.3 1 0 0 1 1 1 0 DASH complex subunit Dam1 Cortexin PF11057.8 NODE_64867_length_248_cov_1.314554_g56926_i0reverse_frame_2 - 0.12 12.3 0.7 0.16 11.8 0.7 1.2 1 0 0 1 1 1 0 Cortexin of kidney Wzy_C PF04932.15 NODE_64865_length_248_cov_1.333333_g56924_i0forward_frame_2 - 1.7 8.3 7.2 1.9 8.1 7.2 1.0 1 0 0 1 1 1 0 O-Antigen ligase AA_permease_C PF13906.6 NODE_64865_length_248_cov_1.333333_g56924_i0forward_frame_2 - 2.4 8.3 13.0 2 8.6 3.9 2.4 1 1 1 2 2 2 0 C-terminus of AA_permease Reprolysin_3 PF13582.6 NODE_64860_length_248_cov_1.427230_g56919_i0reverse_frame_3 - 0.032 14.8 0.0 0.034 14.7 0.0 1.1 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like DUF1644 PF07800.12 NODE_64852_length_248_cov_1.488263_g56911_i0reverse_frame_3 - 0.15 12.1 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) ArsA_HSP20 PF17886.1 NODE_64847_length_248_cov_1.502347_g56906_i0reverse_frame_2 - 0.15 11.6 0.0 0.28 10.8 0.0 1.4 1 0 0 1 1 1 0 HSP20-like domain found in ArsA NPP PF08384.10 NODE_64846_length_248_cov_1.502347_g56905_i0reverse_frame_2 - 0.063 13.3 0.0 0.095 12.8 0.0 1.2 1 0 0 1 1 1 0 Pro-opiomelanocortin, N-terminal region MORN PF02493.20 NODE_64846_length_248_cov_1.502347_g56905_i0forward_frame_2 - 8.7e-13 47.3 5.0 2.2e-07 30.4 0.1 4.1 4 0 0 4 4 4 2 MORN repeat Kelch_5 PF13854.6 NODE_64842_length_248_cov_1.572770_g56901_i0forward_frame_2 - 0.16 12.0 0.8 0.31 11.1 0.5 1.8 2 0 0 2 2 2 0 Kelch motif Drf_GBD PF06371.13 NODE_64840_length_248_cov_1.605634_g56899_i0reverse_frame_2 - 0.023 14.2 2.8 0.026 14.1 2.8 1.1 1 0 0 1 1 1 0 Diaphanous GTPase-binding Domain PAM2 PF07145.15 NODE_64837_length_248_cov_1.624413_g56896_i0reverse_frame_3 - 0.055 13.2 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 Ataxin-2 C-terminal region PI-PLC-X PF00388.19 NODE_64834_length_248_cov_1.647887_g56893_i0reverse_frame_3 - 0.13 11.8 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-specific phospholipase C, X domain Mito_carr PF00153.27 NODE_64832_length_248_cov_1.690141_g56891_i0reverse_frame_2 - 1e-18 67.0 0.0 1.1e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF4364 PF14277.6 NODE_64831_length_248_cov_1.694836_g56890_i0reverse_frame_3 - 0.00044 20.0 0.5 0.00046 20.0 0.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Rep_1B PF17873.1 NODE_64830_length_248_cov_1.723005_g56889_i0reverse_frame_3 - 0.18 11.7 0.1 0.5 10.3 0.1 1.7 1 1 0 1 1 1 0 Replicase polyprotein 1ab Lipoprotein_20 PF13942.6 NODE_64830_length_248_cov_1.723005_g56889_i0reverse_frame_2 - 0.22 11.4 0.0 0.28 11.1 0.0 1.1 1 0 0 1 1 1 0 YfhG lipoprotein INTAP PF16617.5 NODE_64825_length_248_cov_1.779343_g56884_i0reverse_frame_2 - 0.15 12.5 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region Exo_endo_phos_2 PF14529.6 NODE_64823_length_248_cov_1.788732_g56882_i0reverse_frame_3 - 0.011 15.6 0.5 0.018 14.9 0.5 1.5 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase RICH PF05062.12 NODE_64823_length_248_cov_1.788732_g56882_i0reverse_frame_3 - 0.018 15.4 1.0 0.028 14.8 1.0 1.3 1 0 0 1 1 1 0 RICH domain Secretin_N_2 PF07655.13 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_3 - 0.41 11.2 10.5 0.51 10.9 10.5 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain TERB2 PF15101.6 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 0.57 10.2 10.3 0.63 10.1 10.3 1.1 1 0 0 1 1 1 0 Telomere-associated protein TERB2 Spt20 PF12090.8 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 0.71 9.4 24.6 0.89 9.1 24.6 1.2 1 0 0 1 1 1 0 Spt20 family Pex14_N PF04695.13 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 1.1 10.0 12.2 1.2 9.7 12.2 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region TFIIA PF03153.13 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 1.3 9.0 23.5 1.4 8.9 23.5 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit eIF-3_zeta PF05091.12 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 1.4 7.8 11.2 1.4 7.8 11.2 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Presenilin PF01080.17 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 1.9 7.2 5.7 2.1 7.1 5.7 1.0 1 0 0 1 1 1 0 Presenilin Gastrin PF00918.17 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 2 9.4 9.3 2.1 9.3 9.3 1.1 1 0 0 1 1 1 0 Gastrin/cholecystokinin family DUF4834 PF16118.5 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 2.1 9.4 7.9 2.5 9.1 7.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Dicty_REP PF05086.12 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 2.4 6.0 6.8 2.6 5.9 6.8 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein DUF2890 PF11081.8 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 5.3 7.1 10.2 5.8 7.0 10.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) DUF2722 PF10846.8 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 9.3 5.1 20.3 11 4.9 20.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) Cortexin PF11057.8 NODE_64820_length_248_cov_1.812207_g56879_i0forward_frame_2 - 3.3 7.6 8.6 5.6 6.9 8.6 1.5 1 1 0 1 1 1 0 Cortexin of kidney BH3 PF15285.6 NODE_64819_length_248_cov_1.816901_g56878_i0forward_frame_2 - 0.11 12.2 0.0 0.25 11.2 0.0 1.5 1 0 0 1 1 1 0 Beclin-1 BH3 domain, Bcl-2-interacting Pterin_bind PF00809.22 NODE_64818_length_248_cov_1.826291_g56877_i0reverse_frame_2 - 0.026 14.2 0.0 0.029 14.0 0.0 1.0 1 0 0 1 1 1 0 Pterin binding enzyme Tcf25 PF04910.14 NODE_64811_length_248_cov_1.976526_g56870_i0reverse_frame_2 - 4.8e-15 55.5 0.1 5.6e-15 55.3 0.1 1.1 1 0 0 1 1 1 1 Transcriptional repressor TCF25 PMT_4TMC PF16192.5 NODE_64809_length_248_cov_2.014085_g56868_i0forward_frame_2 - 0.076 12.6 1.0 0.084 12.5 1.0 1.0 1 0 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase DUF4538 PF15061.6 NODE_64809_length_248_cov_2.014085_g56868_i0forward_frame_2 - 0.16 11.8 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) Cue1_U7BR PF18499.1 NODE_64800_length_248_cov_2.154930_g56859_i0reverse_frame_2 - 0.0023 17.9 0.2 0.0039 17.2 0.2 1.4 1 0 0 1 1 1 1 Ubc7p-binding region of Cue1 GCR1_C PF12550.8 NODE_64800_length_248_cov_2.154930_g56859_i0reverse_frame_2 - 0.1 12.9 0.1 0.13 12.6 0.1 1.2 1 0 0 1 1 1 0 Transcriptional activator of glycolytic enzymes GPHR_N PF12537.8 NODE_64800_length_248_cov_2.154930_g56859_i0forward_frame_3 - 0.016 15.3 0.0 0.027 14.6 0.0 1.4 1 0 0 1 1 1 0 The Golgi pH Regulator (GPHR) Family N-terminal Phosphorylase PF00343.20 NODE_64799_length_248_cov_2.154930_g56858_i0reverse_frame_3 - 4.1e-29 101.4 0.0 4.4e-29 101.3 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase Ephrin_rec_like PF07699.13 NODE_64797_length_248_cov_2.187793_g56856_i0reverse_frame_3 - 0.0053 16.5 0.3 0.0072 16.1 0.3 1.2 1 0 0 1 1 1 1 Putative ephrin-receptor like Benyvirus_14KDa PF07255.11 NODE_64797_length_248_cov_2.187793_g56856_i0forward_frame_3 - 0.29 11.4 2.9 0.32 11.2 2.9 1.1 1 0 0 1 1 1 0 Benyvirus 14KDa protein HD_3 PF13023.6 NODE_64797_length_248_cov_2.187793_g56856_i0forward_frame_2 - 0.08 12.9 0.2 0.11 12.4 0.2 1.3 1 1 0 1 1 1 0 HD domain Herpes_UL36 PF03586.13 NODE_64797_length_248_cov_2.187793_g56856_i0forward_frame_2 - 0.19 11.0 0.0 0.22 10.8 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL36 tegument protein Gp49 PF05973.14 NODE_64796_length_248_cov_2.197183_g56855_i0forward_frame_2 - 0.061 13.5 0.1 0.072 13.2 0.1 1.2 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) PDZ_5 PF17817.1 NODE_64795_length_248_cov_2.201878_g56854_i0reverse_frame_3 - 0.14 12.5 0.1 0.19 12.0 0.1 1.2 1 0 0 1 1 1 0 PDZ domain Poxvirus PF06227.12 NODE_64794_length_248_cov_2.206573_g56853_i0forward_frame_3 - 0.16 11.7 5.4 0.19 11.5 5.4 1.2 1 0 0 1 1 1 0 dsDNA Poxvirus Acetyltransf_3 PF13302.7 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 1.1e-13 52.0 0.1 1.3e-13 51.8 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 1.7e-05 25.0 0.1 2e-05 24.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 0.00014 22.0 0.1 0.00015 21.9 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 0.00025 20.8 0.0 0.00028 20.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 0.02 14.8 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 FR47-like protein DUF4385 PF14328.6 NODE_64788_length_248_cov_2.305164_g56847_i0reverse_frame_3 - 0.11 12.6 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4385) Coiled-coil_56 PF09813.9 NODE_64783_length_248_cov_2.413146_g56842_i0forward_frame_3 - 0.1 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 56 Ran-binding PF05508.11 NODE_64782_length_248_cov_2.413146_g56841_i0reverse_frame_3 - 0.26 10.2 0.0 0.29 10.1 0.0 1.0 1 0 0 1 1 1 0 RanGTP-binding protein FAD-SLDH PF12318.8 NODE_64782_length_248_cov_2.413146_g56841_i0forward_frame_2 - 0.09 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase Hirudin PF00713.17 NODE_64779_length_248_cov_2.460094_g56838_i0forward_frame_2 - 1.1 9.6 5.5 1.5 9.2 5.5 1.1 1 0 0 1 1 1 0 Hirudin CsgF PF10614.9 NODE_64778_length_248_cov_2.460094_g56837_i0reverse_frame_3 - 3e-13 50.1 0.9 5e-13 49.4 0.9 1.3 1 0 0 1 1 1 1 Type VIII secretion system (T8SS), CsgF protein Ion_trans PF00520.31 NODE_64775_length_248_cov_2.530516_g56834_i0reverse_frame_3 - 0.00023 20.5 5.3 0.00027 20.2 5.3 1.1 1 0 0 1 1 1 1 Ion transport protein Phage_Gp23 PF10669.9 NODE_64767_length_248_cov_2.821596_g56826_i0forward_frame_3 - 0.65 10.3 6.4 0.84 10.0 6.4 1.2 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) Thioredoxin_4 PF13462.6 NODE_64766_length_248_cov_2.840376_g56825_i0reverse_frame_3 - 1e-06 29.1 0.0 1.3e-06 28.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 NODE_64766_length_248_cov_2.840376_g56825_i0reverse_frame_3 - 5.8e-06 26.7 0.0 7.4e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain DSBA PF01323.20 NODE_64766_length_248_cov_2.840376_g56825_i0reverse_frame_3 - 0.084 12.6 0.3 0.12 12.2 0.3 1.3 1 0 0 1 1 1 0 DSBA-like thioredoxin domain AhpC-TSA PF00578.21 NODE_64766_length_248_cov_2.840376_g56825_i0reverse_frame_3 - 0.11 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 AhpC/TSA family Kinesin PF00225.23 NODE_64766_length_248_cov_2.840376_g56825_i0forward_frame_2 - 0.017 14.0 0.0 0.017 14.0 0.0 1.1 1 0 0 1 1 1 0 Kinesin motor domain Microtub_bd PF16796.5 NODE_64766_length_248_cov_2.840376_g56825_i0forward_frame_2 - 0.14 12.1 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Microtubule binding Dpoe2NT PF12213.8 NODE_64761_length_248_cov_2.934272_g56820_i0reverse_frame_3 - 0.029 14.7 0.1 0.041 14.2 0.1 1.3 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal HTH_28 PF13518.6 NODE_64761_length_248_cov_2.934272_g56820_i0reverse_frame_2 - 0.043 14.0 1.2 0.043 14.0 1.2 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain DUF2990 PF11693.8 NODE_64760_length_248_cov_3.075117_g56819_i0reverse_frame_2 - 0.17 12.0 0.0 2.1 8.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2990) 2TM PF13239.6 NODE_64760_length_248_cov_3.075117_g56819_i0forward_frame_3 - 0.38 11.1 1.2 0.61 10.4 1.1 1.4 1 1 0 1 1 1 0 2TM domain NPBW PF15180.6 NODE_64754_length_248_cov_3.253521_g56813_i0reverse_frame_3 - 0.026 14.4 0.7 0.031 14.1 0.7 1.3 1 1 0 1 1 1 0 Neuropeptides B and W Enterotoxin_HS1 PF08090.11 NODE_64750_length_248_cov_3.502347_g56809_i0reverse_frame_3 - 0.1 12.6 0.6 0.1 12.6 0.6 2.0 2 0 0 2 2 2 0 Heat stable E.coli enterotoxin 1 DUF5053 PF16476.5 NODE_64747_length_248_cov_4.427230_g56806_i0forward_frame_3 - 0.063 12.9 0.1 0.096 12.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5053) RNA_pol_Rpc4 PF05132.14 NODE_64745_length_248_cov_7.572770_g56804_i0reverse_frame_2 - 0.0026 18.2 0.0 0.0035 17.8 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase III RPC4 DUF2512 PF10710.9 NODE_64744_length_248_cov_18.943662_g56803_i0reverse_frame_3 - 0.039 13.6 3.0 0.18 11.4 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2512) MSA-2c PF12238.8 NODE_64743_length_248_cov_25.070423_g56802_i0reverse_frame_2 - 1.3 9.0 6.2 1.4 8.9 6.2 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c tRNA-synt_1_2 PF13603.6 NODE_64742_length_248_cov_26.089202_g56801_i0reverse_frame_3 - 0.062 12.8 1.1 0.071 12.6 1.1 1.1 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 DUF3671 PF12420.8 NODE_64742_length_248_cov_26.089202_g56801_i0forward_frame_2 - 0.014 15.5 2.5 0.018 15.1 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function DNA_mis_repair PF01119.19 NODE_64740_length_248_cov_30.732394_g56799_i0forward_frame_3 - 0.016 14.9 0.3 0.017 14.8 0.3 1.1 1 0 0 1 1 1 0 DNA mismatch repair protein, C-terminal domain Nif11 PF07862.11 NODE_64737_length_248_cov_37.591549_g56796_i0reverse_frame_2 - 0.021 15.1 4.5 0.7 10.2 4.5 2.1 1 1 0 1 1 1 0 Nif11 domain Ribosomal_L36e PF01158.18 NODE_64737_length_248_cov_37.591549_g56796_i0reverse_frame_2 - 0.03 14.5 1.9 0.04 14.2 1.9 1.2 1 0 0 1 1 1 0 Ribosomal protein L36e Vpu PF00558.19 NODE_64735_length_248_cov_39.417840_g56794_i0reverse_frame_3 - 0.0038 17.0 0.5 0.0058 16.4 0.5 1.4 1 0 0 1 1 1 1 Vpu protein YebO PF13974.6 NODE_64735_length_248_cov_39.417840_g56794_i0reverse_frame_3 - 0.035 14.2 0.2 0.042 13.9 0.2 1.2 1 0 0 1 1 1 0 YebO-like protein DUF485 PF04341.12 NODE_64735_length_248_cov_39.417840_g56794_i0reverse_frame_3 - 0.14 12.1 0.4 0.29 11.1 0.4 1.6 1 1 0 1 1 1 0 Protein of unknown function, DUF485 CENP-M PF11111.8 NODE_64733_length_248_cov_41.873239_g56792_i0forward_frame_3 - 0.0032 16.7 0.1 0.004 16.4 0.1 1.1 1 0 0 1 1 1 1 Centromere protein M (CENP-M) Oxidored-like PF09791.9 NODE_64730_length_248_cov_45.981221_g56789_i0reverse_frame_2 - 0.009 15.7 0.1 0.013 15.2 0.1 1.2 1 0 0 1 1 1 1 Oxidoreductase-like protein, N-terminal TIMELESS_C PF05029.13 NODE_64725_length_248_cov_49.610329_g56784_i0reverse_frame_2 - 0.19 10.8 7.3 0.2 10.8 7.3 1.0 1 0 0 1 1 1 0 Timeless protein C terminal region Chorion_2 PF03964.15 NODE_64725_length_248_cov_49.610329_g56784_i0forward_frame_3 - 0.11 13.3 6.1 0.14 13.0 6.1 1.2 1 0 0 1 1 1 0 Chorion family 2 AF-4 PF05110.13 NODE_64725_length_248_cov_49.610329_g56784_i0forward_frame_3 - 3.8 5.5 15.0 4 5.4 15.0 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF621 PF04789.15 NODE_64725_length_248_cov_49.610329_g56784_i0forward_frame_2 - 0.058 12.6 0.8 0.074 12.2 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF621) TMCO5 PF14992.6 NODE_64725_length_248_cov_49.610329_g56784_i0forward_frame_2 - 0.27 10.8 0.2 0.28 10.7 0.2 1.1 1 0 0 1 1 1 0 TMCO5 family DUF5079 PF16882.5 NODE_64722_length_248_cov_51.690141_g56781_i0forward_frame_2 - 0.1 12.5 2.8 0.12 12.3 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5079) RCC1_2 PF13540.6 NODE_64718_length_248_cov_60.154930_g56777_i0reverse_frame_3 - 3.5e-17 61.7 6.0 4.9e-08 32.6 0.2 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_64718_length_248_cov_60.154930_g56777_i0reverse_frame_3 - 2.7e-07 31.1 11.0 0.067 13.8 0.3 3.2 2 1 1 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Kelch_5 PF13854.6 NODE_64718_length_248_cov_60.154930_g56777_i0reverse_frame_3 - 0.093 12.7 0.0 2.9 8.0 0.0 2.2 2 0 0 2 2 2 0 Kelch motif Kelch_6 PF13964.6 NODE_64718_length_248_cov_60.154930_g56777_i0reverse_frame_3 - 0.13 12.6 0.1 10 6.6 0.0 2.2 2 0 0 2 2 2 0 Kelch motif Tnp_22_trimer PF17489.2 NODE_64717_length_248_cov_61.201878_g56776_i0reverse_frame_3 - 0.12 12.4 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 L1 transposable element trimerization domain DNase_NucA_NucB PF14040.6 NODE_64716_length_248_cov_62.032864_g56775_i0reverse_frame_3 - 0.067 13.6 0.2 0.082 13.3 0.2 1.2 1 0 0 1 1 1 0 Deoxyribonuclease NucA/NucB DUF5549 PF17703.1 NODE_64714_length_248_cov_64.478873_g56773_i0reverse_frame_3 - 0.37 10.4 4.3 0.43 10.2 4.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5549) DUF5538 PF17692.1 NODE_64711_length_248_cov_66.915493_g56770_i0forward_frame_2 - 0.052 13.6 2.1 0.058 13.5 2.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) TIP49_C PF17856.1 NODE_64710_length_248_cov_69.248826_g56769_i0forward_frame_2 - 0.13 12.5 0.1 0.23 11.6 0.1 1.4 1 0 0 1 1 1 0 TIP49 AAA-lid domain PIP49_N PF14875.6 NODE_64709_length_248_cov_69.338028_g56768_i0reverse_frame_3 - 0.013 15.4 0.8 0.015 15.1 0.8 1.0 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 UBA PF00627.31 NODE_64706_length_248_cov_71.643192_g56765_i0reverse_frame_3 - 0.12 12.3 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 UBA/TS-N domain YfhO PF09586.10 NODE_64705_length_248_cov_73.300469_g56764_i0reverse_frame_3 - 7.2 4.7 7.7 8.6 4.4 7.7 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO FUSC_2 PF13515.6 NODE_64705_length_248_cov_73.300469_g56764_i0reverse_frame_2 - 0.062 13.4 1.4 0.082 13.0 1.4 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein-like SR-25 PF10500.9 NODE_64705_length_248_cov_73.300469_g56764_i0forward_frame_2 - 0.079 12.6 6.7 0.084 12.5 6.7 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Cluap1 PF10234.9 NODE_64702_length_248_cov_78.596244_g56761_i0forward_frame_2 - 1.6e-06 27.7 5.9 1.7e-06 27.6 5.9 1.0 1 0 0 1 1 1 1 Clusterin-associated protein-1 Utp21 PF04192.12 NODE_64702_length_248_cov_78.596244_g56761_i0forward_frame_2 - 0.0055 16.2 0.9 0.006 16.1 0.9 1.0 1 0 0 1 1 1 1 Utp21 specific WD40 associated putative domain L27_1 PF09058.10 NODE_64702_length_248_cov_78.596244_g56761_i0forward_frame_2 - 0.038 14.0 2.0 0.29 11.2 0.0 2.1 1 1 1 2 2 2 0 L27_1 NADH-G_4Fe-4S_3 PF10588.9 NODE_64701_length_248_cov_79.953052_g56760_i0reverse_frame_2 - 0.035 13.7 0.1 0.058 12.9 0.1 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Peptidase_S66 PF02016.15 NODE_64698_length_248_cov_93.793427_g56757_i0reverse_frame_2 - 0.096 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 LD-carboxypeptidase N-terminal domain Ost5 PF05251.12 NODE_64696_length_248_cov_97.286385_g56755_i0reverse_frame_3 - 0.00011 22.4 2.1 0.00018 21.7 2.1 1.3 1 0 0 1 1 1 1 Oligosaccharyltransferase subunit 5 DUF2368 PF10166.9 NODE_64694_length_248_cov_107.737089_g56753_i0reverse_frame_3 - 0.0048 16.5 0.7 0.0054 16.4 0.7 1.1 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2368) Hep_core_N PF08290.11 NODE_64692_length_248_cov_110.591549_g56751_i0reverse_frame_2 - 1 9.4 7.6 0.41 10.7 5.0 1.7 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger Ephrin_rec_like PF07699.13 NODE_64692_length_248_cov_110.591549_g56751_i0forward_frame_2 - 0.00049 19.8 9.0 0.01 15.6 4.7 2.2 1 1 1 2 2 2 2 Putative ephrin-receptor like S-AdoMet_synt_C PF02773.16 NODE_64690_length_248_cov_141.755869_g56749_i0reverse_frame_3 - 0.068 13.2 0.0 0.089 12.8 0.0 1.2 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain MPC PF03650.13 NODE_64689_length_248_cov_142.187793_g56748_i0reverse_frame_3 - 0.035 14.2 0.1 0.045 13.9 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial pyruvate carriers LAM_C PF12544.8 NODE_64689_length_248_cov_142.187793_g56748_i0reverse_frame_2 - 0.23 11.7 0.0 0.24 11.6 0.0 1.1 1 0 0 1 1 1 0 Lysine-2,3-aminomutase DUF2101 PF09874.9 NODE_64687_length_248_cov_144.704225_g56746_i0reverse_frame_3 - 0.63 9.7 6.4 0.74 9.5 6.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks294.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks294.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks294.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks294.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Rota_NS6 PF04866.12 NODE_64681_length_248_cov_256.169014_g56740_i0reverse_frame_2 - 0.12 12.6 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 6 Ribosomal_L39 PF00832.20 NODE_64677_length_248_cov_3128.361502_g56736_i0forward_frame_3 - 2.5e-16 59.0 14.2 3.1e-16 58.7 14.2 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein CxC6 PF18721.1 NODE_64677_length_248_cov_3128.361502_g56736_i0forward_frame_2 - 0.019 15.3 0.1 0.021 15.1 0.1 1.3 1 0 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases DUF2796 PF10986.8 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.0079 16.2 1.4 0.0088 16.0 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2796) DUF4746 PF15928.5 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.023 14.1 2.8 0.026 14.0 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) MAM33 PF02330.16 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.036 14.0 7.8 0.04 13.9 7.8 1.0 1 0 0 1 1 1 0 Mitochondrial glycoprotein Tim54 PF11711.8 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.05 12.4 1.3 0.052 12.3 1.3 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF3464 PF11947.8 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.15 11.8 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Vfa1 PF08432.10 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.41 10.9 5.5 0.43 10.9 5.5 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Afi1 PF07792.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.63 10.5 9.3 0.71 10.3 9.3 1.1 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking TRAP_alpha PF03896.16 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.66 9.1 12.1 0.72 9.0 12.1 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit DUF913 PF06025.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 1.3 7.9 4.9 1.4 7.8 4.9 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Cytomega_UL84 PF06284.11 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 1.9 6.8 5.6 2.1 6.7 5.6 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein RPN2_C PF18004.1 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 2.7 7.9 8.2 3 7.7 8.2 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain TFB6 PF17110.5 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 3 7.6 14.0 3.7 7.3 14.0 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH CSRNP_N PF16019.5 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 3.7 7.4 5.0 3.8 7.4 5.0 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus DUF2457 PF10446.9 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 4.3 6.4 32.4 4.8 6.2 32.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Cwf_Cwc_15 PF04889.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 5.2 6.7 26.9 6.2 6.5 26.9 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Nop14 PF04147.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 5.2 5.2 24.5 5.9 5.0 24.5 1.0 1 0 0 1 1 1 0 Nop14-like family DNA_pol_phi PF04931.13 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 5.3 5.0 32.5 5.7 4.9 32.5 1.0 1 0 0 1 1 1 0 DNA polymerase phi ORC_WH_C PF18137.1 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 6.7 6.8 7.9 8 6.5 7.9 1.1 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal Mpp10 PF04006.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 6.7 5.0 20.9 7.3 4.9 20.9 1.0 1 0 0 1 1 1 0 Mpp10 protein GCIP PF13324.6 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 7 6.2 12.3 9.9 5.7 12.3 1.3 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting FYDLN_acid PF09538.10 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 8.5 7.1 24.1 10 6.8 24.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) DUF4637 PF15470.6 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 8.9 6.0 15.1 11 5.7 15.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Nop53 PF07767.11 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 9.8 5.5 14.4 10 5.4 14.4 1.0 1 0 0 1 1 1 0 Nop53 (60S ribosomal biogenesis) Mit_proteolip PF08039.11 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_2 - 0.13 12.7 0.1 0.17 12.3 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial proteolipid Secretin_N_2 PF07655.13 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 0.025 15.1 13.2 0.029 14.9 13.2 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain CCDC24 PF15669.5 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 0.033 14.0 9.1 0.038 13.9 9.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family FliX PF10768.9 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 0.17 12.4 0.4 0.19 12.2 0.4 1.1 1 0 0 1 1 1 0 Class II flagellar assembly regulator Inp1 PF12634.7 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 0.36 10.8 4.7 0.46 10.5 4.7 1.2 1 0 0 1 1 1 0 Inheritance of peroxisomes protein 1 Macoilin PF09726.9 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 2.8 6.4 11.1 2.8 6.4 11.1 1.0 1 0 0 1 1 1 0 Macoilin family SSP160 PF06933.11 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 5.2 5.1 18.1 5.2 5.1 18.1 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF4614 PF15391.6 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 7.5 6.5 15.7 9 6.3 15.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) DUF3482 PF11981.8 NODE_64673_length_248_cov_26020.586854_g56732_i0reverse_frame_3 - 0.0034 16.8 5.2 0.0034 16.8 5.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) DUF3482 PF11981.8 NODE_64672_length_248_cov_26228.990610_g56731_i0forward_frame_3 - 0.054 12.9 8.7 0.068 12.6 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) TetR_C_6 PF13977.6 NODE_64671_length_248_cov_72524.000000_g56730_i0reverse_frame_3 - 0.02 15.1 0.3 0.027 14.7 0.3 1.2 1 0 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal Tmemb_185A PF10269.9 NODE_64669_length_249_cov_0.934579_g56728_i0reverse_frame_3 - 0.00016 21.5 0.8 0.00018 21.3 0.8 1.1 1 0 0 1 1 1 1 Transmembrane Fragile-X-F protein Kinesin PF00225.23 NODE_64668_length_249_cov_0.934579_g56727_i0forward_frame_3 - 5.4e-08 32.1 0.7 6e-08 32.0 0.7 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_64668_length_249_cov_0.934579_g56727_i0forward_frame_3 - 0.00014 21.8 1.2 0.00016 21.6 1.2 1.1 1 0 0 1 1 1 1 Microtubule binding NID PF07292.13 NODE_64668_length_249_cov_0.934579_g56727_i0forward_frame_3 - 0.025 15.2 0.4 0.035 14.7 0.3 1.3 1 1 0 1 1 1 0 Nmi/IFP 35 domain (NID) Lamprin PF06403.11 NODE_64667_length_249_cov_1.046729_g56726_i0forward_frame_2 - 0.32 10.9 2.7 0.22 11.5 0.4 1.7 1 1 1 2 2 2 0 Lamprin CFC PF09443.10 NODE_64663_length_249_cov_1.116822_g56722_i0forward_frame_2 - 0.1 12.5 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 Cripto_Frl-1_Cryptic (CFC) DUF910 PF06014.11 NODE_64660_length_249_cov_1.121495_g56719_i0forward_frame_3 - 0.028 14.4 0.0 0.041 13.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF910) bVLRF1 PF18826.1 NODE_64660_length_249_cov_1.121495_g56719_i0forward_frame_2 - 0.14 12.0 0.2 0.18 11.7 0.2 1.0 1 0 0 1 1 1 0 bacteroidetes VLRF1 release factor DUF4791 PF16039.5 NODE_64659_length_249_cov_1.130841_g56718_i0reverse_frame_2 - 0.078 12.5 0.2 0.091 12.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4791) Tyr_Deacylase PF02580.16 NODE_64654_length_249_cov_1.331776_g56713_i0forward_frame_2 - 0.1 13.1 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 D-Tyr-tRNA(Tyr) deacylase PI_PP_C PF18365.1 NODE_64651_length_249_cov_1.420561_g56710_i0forward_frame_3 - 0.035 14.1 0.2 0.041 13.9 0.2 1.2 1 0 0 1 1 1 0 Phosphoinositide phosphatase C-terminal domain Paramyxo_P_V_N PF13825.6 NODE_64650_length_249_cov_1.434579_g56709_i0reverse_frame_2 - 0.094 12.1 0.1 0.1 12.0 0.1 1.1 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus LSR PF05624.14 NODE_64650_length_249_cov_1.434579_g56709_i0forward_frame_3 - 0.041 13.9 8.6 0.082 12.9 8.6 1.5 1 0 0 1 1 1 0 Lipolysis stimulated receptor (LSR) Got1 PF04178.12 NODE_64649_length_249_cov_1.457944_g56708_i0forward_frame_3 - 0.023 15.1 4.1 0.035 14.5 4.1 1.2 1 0 0 1 1 1 0 Got1/Sft2-like family Toxin_28 PF08115.11 NODE_64646_length_249_cov_1.471963_g56705_i0forward_frame_2 - 0.1 12.5 0.3 0.16 11.8 0.3 1.3 1 0 0 1 1 1 0 SFI toxin family zf-HC5HC2H_2 PF13832.6 NODE_64644_length_249_cov_1.471963_g56703_i0forward_frame_3 - 0.025 14.7 0.0 0.025 14.7 0.0 1.1 1 0 0 1 1 1 0 PHD-zinc-finger like domain MATalpha_HMGbox PF04769.12 NODE_64644_length_249_cov_1.471963_g56703_i0forward_frame_2 - 0.061 12.6 0.0 0.07 12.4 0.0 1.1 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box Pox_A21 PF05323.12 NODE_64642_length_249_cov_1.485981_g56701_i0reverse_frame_3 - 0.095 13.3 2.2 0.11 13.1 2.2 1.2 1 0 0 1 1 1 0 Poxvirus A21 Protein zf-RanBP PF00641.18 NODE_64639_length_249_cov_1.495327_g56698_i0reverse_frame_3 - 0.055 12.8 0.1 0.055 12.8 0.1 1.7 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others TBCA PF02970.16 NODE_64638_length_249_cov_1.495327_g56697_i0forward_frame_2 - 0.2 12.0 6.8 0.28 11.5 6.6 1.4 1 1 0 1 1 1 0 Tubulin binding cofactor A PseudoU_synth_2 PF00849.22 NODE_64636_length_249_cov_1.537383_g56695_i0forward_frame_2 - 5e-11 42.9 0.0 5.6e-11 42.8 0.0 1.0 1 0 0 1 1 1 1 RNA pseudouridylate synthase Glyco_transf_8C PF08437.10 NODE_64635_length_249_cov_1.546729_g56694_i0forward_frame_3 - 0.082 13.0 2.7 0.13 12.3 2.7 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 8 C-terminal DUF5094 PF17015.5 NODE_64632_length_249_cov_1.602804_g56691_i0reverse_frame_2 - 0.06 13.5 0.6 0.071 13.2 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) DUF5383 PF17355.2 NODE_64631_length_249_cov_1.616822_g56690_i0forward_frame_2 - 0.058 13.8 2.4 0.066 13.6 2.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5383) TAP_C PF03943.13 NODE_64626_length_249_cov_1.668224_g56685_i0reverse_frame_2 - 0.12 12.0 0.3 0.19 11.4 0.3 1.3 1 0 0 1 1 1 0 TAP C-terminal domain Toxin_16 PF07945.11 NODE_64625_length_249_cov_1.668224_g56684_i0reverse_frame_3 - 0.078 12.9 3.6 0.14 12.1 3.6 1.4 1 0 0 1 1 1 0 Janus-atracotoxin zf-C2H2_4 PF13894.6 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.0022 18.7 0.6 0.0061 17.3 0.6 1.8 1 0 0 1 1 1 1 C2H2-type zinc finger zf-Di19 PF05605.12 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.0043 17.3 0.6 0.0074 16.6 0.6 1.4 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding Rhodanese_C PF12368.8 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.018 15.4 0.4 0.023 15.1 0.4 1.3 1 1 0 1 1 1 0 Rhodanase C-terminal zinc-ribbons_6 PF07191.12 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.026 14.5 2.4 0.037 14.0 2.4 1.5 1 1 0 1 1 1 0 zinc-ribbons SyrA PF11089.8 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.056 13.5 0.9 0.08 13.0 0.9 1.2 1 0 0 1 1 1 0 Exopolysaccharide production repressor DUF629 PF04780.12 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.066 11.7 0.5 0.1 11.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF629) zf-H2C2_2 PF13465.6 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.084 13.3 0.5 0.55 10.8 0.3 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.13 12.8 1.1 0.27 11.8 0.3 2.0 2 0 0 2 2 2 0 Zinc finger, C2H2 type SnoaL PF07366.12 NODE_64624_length_249_cov_1.672897_g56683_i0forward_frame_3 - 0.14 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase Staufen_C PF16482.5 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_3 - 0.034 14.3 1.0 0.042 14.0 1.0 1.2 1 0 0 1 1 1 0 Staufen C-terminal domain DUF4589 PF15252.6 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_2 - 0.013 15.5 4.5 0.014 15.4 4.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) Ten_N PF06484.12 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_2 - 0.099 12.5 2.5 0.12 12.3 2.5 1.0 1 0 0 1 1 1 0 Teneurin Intracellular Region CAP_N PF01213.19 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_2 - 0.21 11.1 2.3 0.22 11.0 2.3 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal CDC45 PF02724.14 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_2 - 0.58 8.4 2.0 0.6 8.3 2.0 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF3689 PF12463.8 NODE_64619_length_249_cov_1.747664_g56678_i0forward_frame_3 - 0.015 14.6 0.1 0.015 14.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3689) Myb_DNA-binding PF00249.31 NODE_64613_length_249_cov_1.813084_g56672_i0reverse_frame_2 - 2e-10 40.7 3.8 1.4e-09 38.0 1.3 2.0 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_64613_length_249_cov_1.813084_g56672_i0reverse_frame_2 - 1.8e-08 34.5 2.5 1.4e-07 31.7 0.2 2.0 2 0 0 2 2 2 1 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 NODE_64613_length_249_cov_1.813084_g56672_i0reverse_frame_2 - 0.071 13.3 2.2 2.6 8.3 0.2 2.1 1 1 1 2 2 2 0 SANT/Myb-like domain of DAMP1 Myb_DNA-bind_5 PF13873.6 NODE_64613_length_249_cov_1.813084_g56672_i0reverse_frame_2 - 0.12 12.4 2.9 7.5 6.7 0.0 2.9 2 1 1 3 3 3 0 Myb/SANT-like DNA-binding domain TMEM251 PF15190.6 NODE_64613_length_249_cov_1.813084_g56672_i0forward_frame_2 - 0.0034 17.3 0.5 0.0037 17.2 0.5 1.1 1 0 0 1 1 1 1 Transmembrane protein 251 DUF2735 PF10931.8 NODE_64608_length_249_cov_1.850467_g56667_i0forward_frame_3 - 0.11 13.2 1.3 0.11 13.2 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2735) CCDC53 PF10152.9 NODE_64608_length_249_cov_1.850467_g56667_i0forward_frame_2 - 0.078 13.4 4.2 0.088 13.2 4.2 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex Transglut_prok PF09017.10 NODE_64608_length_249_cov_1.850467_g56667_i0forward_frame_2 - 1.4 8.2 4.0 1.6 8.0 4.0 1.0 1 0 0 1 1 1 0 Microbial transglutaminase FAP PF07174.11 NODE_64608_length_249_cov_1.850467_g56667_i0forward_frame_2 - 2.2 7.7 17.0 2.2 7.6 17.0 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Hydrolase PF00702.26 NODE_64605_length_249_cov_1.864486_g56664_i0reverse_frame_2 - 0.0075 16.6 0.2 0.0075 16.6 0.2 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase LRR_6 PF13516.6 NODE_64599_length_249_cov_1.939252_g56658_i0reverse_frame_3 - 1.3e-05 24.9 0.0 1.3e-05 24.9 0.0 2.4 3 0 0 3 3 3 1 Leucine Rich repeat LRR_4 PF12799.7 NODE_64599_length_249_cov_1.939252_g56658_i0reverse_frame_3 - 0.18 12.3 0.2 0.18 12.3 0.2 2.6 2 1 0 2 2 2 0 Leucine Rich repeats (2 copies) DUF2989 PF11207.8 NODE_64597_length_249_cov_1.957944_g56656_i0forward_frame_2 - 0.071 12.9 0.1 0.079 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2989) Nrap_D6 PF17407.2 NODE_64595_length_249_cov_1.981308_g56654_i0forward_frame_2 - 0.21 11.8 0.0 0.26 11.5 0.0 1.1 1 0 0 1 1 1 0 Nrap protein domain 6 ChaB PF06150.12 NODE_64593_length_249_cov_1.990654_g56652_i0reverse_frame_2 - 2.8e-24 85.5 2.6 3.4e-24 85.2 2.6 1.1 1 0 0 1 1 1 1 ChaB NTS PF15447.6 NODE_64593_length_249_cov_1.990654_g56652_i0reverse_frame_2 - 0.0073 16.8 0.1 0.014 15.9 0.1 1.4 1 0 0 1 1 1 1 N-terminal segments of PfEMP1 DUF1648 PF07853.11 NODE_64591_length_249_cov_2.023364_g56650_i0reverse_frame_2 - 0.089 12.5 0.2 0.13 11.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1648) EF-hand_1 PF00036.32 NODE_64588_length_249_cov_2.107477_g56647_i0forward_frame_2 - 0.016 14.7 0.0 0.088 12.4 0.0 2.1 2 0 0 2 2 2 0 EF hand EF-hand_6 PF13405.6 NODE_64588_length_249_cov_2.107477_g56647_i0forward_frame_2 - 0.016 15.1 0.0 0.49 10.5 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain EF-hand_7 PF13499.6 NODE_64588_length_249_cov_2.107477_g56647_i0forward_frame_2 - 0.021 15.3 0.1 4.6 7.8 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_8 PF13833.6 NODE_64588_length_249_cov_2.107477_g56647_i0forward_frame_2 - 0.032 14.1 0.2 1.3 9.0 0.0 2.7 3 0 0 3 3 3 0 EF-hand domain pair DiS_P_DiS PF06750.13 NODE_64583_length_249_cov_2.163551_g56642_i0forward_frame_2 - 0.036 14.2 0.1 0.036 14.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain TPR_19 PF14559.6 NODE_64581_length_249_cov_2.186916_g56640_i0forward_frame_2 - 0.0057 17.1 0.6 0.0073 16.8 0.6 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat RPAP2_Rtr1 PF04181.13 NODE_64580_length_249_cov_2.196262_g56639_i0reverse_frame_2 - 0.095 13.0 0.3 0.095 13.0 0.3 1.5 2 0 0 2 2 2 0 Rtr1/RPAP2 family CEP63 PF17045.5 NODE_64577_length_249_cov_2.303738_g56636_i0forward_frame_2 - 0.0048 16.8 7.1 0.0054 16.7 7.1 1.1 1 0 0 1 1 1 1 Centrosomal protein of 63 kDa PI_PP_I PF18363.1 NODE_64577_length_249_cov_2.303738_g56636_i0forward_frame_2 - 0.076 13.2 2.3 0.29 11.4 2.3 1.8 1 1 0 1 1 1 0 Phosphoinositide phosphatase insertion domain Spc7 PF08317.11 NODE_64577_length_249_cov_2.303738_g56636_i0forward_frame_2 - 0.09 11.6 8.4 0.093 11.6 8.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein bZIP_1 PF00170.21 NODE_64577_length_249_cov_2.303738_g56636_i0forward_frame_2 - 0.38 10.9 7.3 0.1 12.7 4.5 1.6 2 0 0 2 2 2 0 bZIP transcription factor NblA PF04485.12 NODE_64575_length_249_cov_2.392523_g56634_i0forward_frame_2 - 0.038 14.4 0.1 0.058 13.8 0.1 1.3 1 0 0 1 1 1 0 Phycobilisome degradation protein nblA Fer4 PF00037.27 NODE_64575_length_249_cov_2.392523_g56634_i0forward_frame_2 - 0.22 11.4 2.6 0.36 10.7 2.6 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain SMN PF06003.12 NODE_64574_length_249_cov_2.392523_g56633_i0forward_frame_2 - 0.27 10.5 0.5 0.31 10.2 0.5 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) MdoG PF04349.12 NODE_64571_length_249_cov_2.560748_g56630_i0reverse_frame_2 - 1.2e-33 116.8 0.1 1.3e-33 116.7 0.1 1.0 1 0 0 1 1 1 1 Periplasmic glucan biosynthesis protein, MdoG TAT_signal PF10518.9 NODE_64570_length_249_cov_2.584112_g56629_i0forward_frame_3 - 0.054 13.4 1.0 0.13 12.1 0.2 2.2 1 1 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Vsr PF03852.15 NODE_64567_length_249_cov_2.663551_g56626_i0reverse_frame_3 - 0.19 11.6 0.0 0.74 9.7 0.0 1.8 2 0 0 2 2 2 0 DNA mismatch endonuclease Vsr Pik1 PF11522.8 NODE_64560_length_249_cov_2.911215_g56619_i0reverse_frame_3 - 0.007 16.3 0.3 0.01 15.8 0.3 1.2 1 0 0 1 1 1 1 Yeast phosphatidylinositol-4-OH kinase Pik1 EzrA PF06160.12 NODE_64559_length_249_cov_2.967290_g56618_i0reverse_frame_2 - 0.0041 15.4 2.2 0.0043 15.3 2.2 1.0 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA Glyco_hydro81C PF17652.1 NODE_64559_length_249_cov_2.967290_g56618_i0reverse_frame_2 - 0.044 13.0 0.0 0.044 13.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 81 C-terminal domain SpoU_methylase PF00588.19 NODE_64558_length_249_cov_3.028037_g56617_i0reverse_frame_2 - 5.4e-11 42.8 0.0 6.7e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family zf-C3H1 PF10650.9 NODE_64558_length_249_cov_3.028037_g56617_i0reverse_frame_2 - 0.051 13.3 0.1 0.084 12.6 0.1 1.4 1 0 0 1 1 1 0 Putative zinc-finger domain TM231 PF10149.9 NODE_64553_length_249_cov_3.434579_g56612_i0reverse_frame_2 - 5.2e-13 49.0 0.3 5.5e-13 48.9 0.3 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 DUF3822 PF12864.7 NODE_64549_length_249_cov_7.957944_g56608_i0forward_frame_2 - 0.0074 15.5 1.2 0.0077 15.4 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3822) EB1 PF03271.17 NODE_64543_length_249_cov_24.714953_g56602_i0forward_frame_2 - 0.038 14.2 0.2 0.057 13.7 0.2 1.3 1 0 0 1 1 1 0 EB1-like C-terminal motif Tower PF09121.10 NODE_64542_length_249_cov_24.985981_g56601_i0reverse_frame_3 - 0.29 11.4 0.3 0.29 11.4 0.3 2.0 2 0 0 2 2 2 0 Tower Tmemb_161AB PF10268.9 NODE_64538_length_249_cov_36.897196_g56597_i0reverse_frame_3 - 0.019 13.6 1.1 0.022 13.4 1.1 1.1 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB TAF4 PF05236.14 NODE_64538_length_249_cov_36.897196_g56597_i0forward_frame_3 - 4.9 6.8 15.1 5.7 6.6 15.1 1.0 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family Trehalase PF01204.18 NODE_64536_length_249_cov_37.425234_g56595_i0reverse_frame_2 - 0.29 9.9 0.0 0.35 9.7 0.0 1.0 1 0 0 1 1 1 0 Trehalase Zn-ribbon_8 PF09723.10 NODE_64535_length_249_cov_40.158879_g56594_i0forward_frame_2 - 0.063 13.4 1.6 0.12 12.6 1.6 1.5 1 0 0 1 1 1 0 Zinc ribbon domain OPT PF03169.15 NODE_64532_length_249_cov_41.196262_g56591_i0forward_frame_2 - 0.065 11.9 0.4 0.075 11.7 0.4 1.0 1 0 0 1 1 1 0 OPT oligopeptide transporter protein Tht1 PF04163.12 NODE_64531_length_249_cov_42.014019_g56590_i0reverse_frame_3 - 0.044 12.5 0.0 0.049 12.4 0.0 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein PRP3 PF08572.10 NODE_64528_length_249_cov_44.121495_g56587_i0reverse_frame_2 - 0.00047 20.0 5.9 0.00056 19.7 5.9 1.0 1 0 0 1 1 1 1 pre-mRNA processing factor 3 (PRP3) DUF2407 PF10302.9 NODE_64528_length_249_cov_44.121495_g56587_i0reverse_frame_2 - 0.046 14.3 2.8 0.059 13.9 2.8 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF3593 PF12159.8 NODE_64527_length_249_cov_46.560748_g56586_i0reverse_frame_2 - 0.014 15.4 0.0 0.014 15.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3593) MDMPI_N PF11716.8 NODE_64526_length_249_cov_46.878505_g56585_i0forward_frame_2 - 0.07 13.8 0.3 0.099 13.3 0.3 1.3 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain COX7B PF05392.11 NODE_64522_length_249_cov_53.873832_g56581_i0reverse_frame_2 - 0.13 12.0 0.1 0.2 11.4 0.1 1.3 1 1 0 1 1 1 0 Cytochrome C oxidase chain VIIB NACHT PF05729.12 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 9.9e-05 22.3 0.2 0.00014 21.8 0.2 1.2 1 0 0 1 1 1 1 NACHT domain AAA_33 PF13671.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.00016 21.9 0.2 0.0016 18.6 0.1 2.0 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.00017 21.5 0.3 0.00025 20.9 0.3 1.3 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein G-alpha PF00503.20 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.00068 18.9 0.2 0.00068 18.9 0.2 1.2 1 0 0 1 1 1 1 G-protein alpha subunit Pox_A32 PF04665.12 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0015 18.0 0.1 0.0026 17.3 0.1 1.4 1 1 1 2 2 2 1 Poxvirus A32 protein DUF87 PF01935.17 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0018 18.4 0.4 0.0032 17.6 0.4 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain NB-ARC PF00931.22 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0021 17.3 0.0 0.0021 17.3 0.0 1.2 1 0 0 1 1 1 1 NB-ARC domain AAA_19 PF13245.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0021 18.4 0.6 0.0041 17.5 0.2 1.6 1 1 1 2 2 2 1 AAA domain Septin PF00735.18 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0026 17.1 0.3 0.0038 16.5 0.1 1.4 1 1 0 1 1 1 1 Septin RNA_helicase PF00910.22 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0026 18.1 1.3 0.0044 17.4 0.2 1.8 2 0 0 2 2 2 1 RNA helicase AAA_16 PF13191.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0026 18.1 0.0 0.0032 17.9 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain SRP54 PF00448.22 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0048 16.6 0.3 0.0048 16.6 0.3 1.4 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Zeta_toxin PF06414.12 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0059 15.9 0.0 0.0077 15.5 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_18 PF13238.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0061 17.1 2.1 0.0066 17.0 0.2 1.8 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0062 16.1 0.2 0.0095 15.5 0.2 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain FtsK_SpoIIIE PF01580.18 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0075 15.6 0.0 0.0078 15.6 0.0 1.1 1 0 0 1 1 1 1 FtsK/SpoIIIE family Myosin_head PF00063.21 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0077 14.5 0.1 0.0077 14.5 0.1 1.2 1 0 0 1 1 1 1 Myosin head (motor domain) Arf PF00025.21 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.008 15.6 0.1 0.011 15.2 0.1 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family TsaE PF02367.17 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.008 16.2 0.1 0.011 15.7 0.1 1.3 1 1 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Viral_helicase1 PF01443.18 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0088 15.8 0.7 0.012 15.4 0.2 1.4 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.012 15.3 0.3 0.02 14.6 0.3 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.015 15.2 0.2 0.025 14.5 0.2 1.3 1 0 0 1 1 1 0 NTPase T2SSE PF00437.20 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.018 14.1 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_22 PF13401.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.018 15.3 0.1 0.025 14.8 0.1 1.3 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.018 14.4 0.0 0.031 13.7 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MobB PF03205.14 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.027 14.3 1.3 0.035 14.0 0.2 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B 6PF2K PF01591.18 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.037 13.3 0.0 0.052 12.8 0.0 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_30 PF13604.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.039 13.7 0.1 0.051 13.3 0.1 1.2 1 1 0 1 1 1 0 AAA domain Roc PF08477.13 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.039 14.2 0.3 0.072 13.3 0.3 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.039 13.4 0.6 0.062 12.7 0.2 1.5 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.04 13.4 0.4 0.059 12.9 0.1 1.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain KTI12 PF08433.10 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.043 13.3 0.4 0.11 11.9 0.1 1.7 1 1 1 2 2 2 0 Chromatin associated protein KTI12 PduV-EutP PF10662.9 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.044 13.5 0.2 0.066 13.0 0.2 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.044 13.7 0.1 0.045 13.7 0.1 1.2 1 1 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.059 13.5 0.4 0.13 12.4 0.1 1.6 1 1 1 2 2 2 0 50S ribosome-binding GTPase AAA_14 PF13173.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.087 12.9 1.3 0.13 12.3 0.3 1.7 1 1 1 2 2 2 0 AAA domain DUF463 PF04317.12 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.097 11.6 0.1 0.12 11.2 0.1 1.2 1 0 0 1 1 1 0 YcjX-like family, DUF463 SKI PF01202.22 NODE_64520_length_249_cov_55.813084_g56579_i0forward_frame_2 - 0.083 13.0 0.0 0.09 12.9 0.0 1.1 1 0 0 1 1 1 0 Shikimate kinase DDE_Tnp_1_2 PF13586.6 NODE_64519_length_249_cov_57.149533_g56578_i0reverse_frame_2 - 0.004 17.5 0.2 0.0065 16.8 0.2 1.3 1 0 0 1 1 1 1 Transposase DDE domain Pex26 PF07163.12 NODE_64508_length_249_cov_84.116822_g56567_i0reverse_frame_3 - 0.046 13.0 5.1 0.047 13.0 5.1 1.0 1 0 0 1 1 1 0 Pex26 protein PTPS_related PF10131.9 NODE_64508_length_249_cov_84.116822_g56567_i0reverse_frame_3 - 0.18 10.1 3.9 0.19 10.0 3.9 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein TFIIF_alpha PF05793.12 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 0.023 13.3 14.1 0.024 13.2 14.1 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Zip PF02535.22 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 0.9 8.7 2.0 0.95 8.6 2.0 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Connexin PF00029.19 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 1.6 8.4 3.5 1.7 8.3 3.5 1.1 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 3.5 6.3 4.3 3.3 6.4 4.3 1.0 1 0 0 1 1 1 0 Presenilin DTHCT PF08070.11 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 3.8 8.3 26.1 4.5 8.1 26.1 1.1 1 0 0 1 1 1 0 DTHCT (NUC029) region RD3 PF14473.6 NODE_64507_length_249_cov_87.588785_g56566_i0reverse_frame_2 - 0.09 12.6 0.1 0.1 12.5 0.1 1.2 1 1 0 1 1 1 0 RD3 protein Herpes_U59 PF04529.12 NODE_64505_length_249_cov_97.098131_g56564_i0reverse_frame_2 - 0.13 11.3 0.4 0.14 11.2 0.4 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein Enkurin PF13864.6 NODE_64501_length_249_cov_106.018692_g56560_i0reverse_frame_3 - 5.2e-08 33.2 0.8 7.8e-08 32.7 0.8 1.2 1 0 0 1 1 1 1 Calmodulin-binding Prefoldin_2 PF01920.20 NODE_64501_length_249_cov_106.018692_g56560_i0reverse_frame_3 - 0.034 14.1 0.4 0.045 13.7 0.4 1.1 1 0 0 1 1 1 0 Prefoldin subunit Bcr-Abl_Oligo PF09036.10 NODE_64501_length_249_cov_106.018692_g56560_i0reverse_frame_3 - 0.095 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Bcr-Abl oncoprotein oligomerisation domain VirB3 PF05101.13 NODE_64493_length_249_cov_147.523364_g56552_i0forward_frame_2 - 0.072 13.3 0.7 0.094 13.0 0.7 1.2 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein Peptidase_C9 PF01707.16 NODE_64490_length_249_cov_157.803738_g56549_i0reverse_frame_2 - 0.12 12.0 0.0 0.14 11.7 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C9 Enkurin PF13864.6 NODE_64484_length_249_cov_244.915888_g56543_i0forward_frame_3 - 5.2e-08 33.2 0.8 7.8e-08 32.7 0.8 1.2 1 0 0 1 1 1 1 Calmodulin-binding Prefoldin_2 PF01920.20 NODE_64484_length_249_cov_244.915888_g56543_i0forward_frame_3 - 0.034 14.1 0.4 0.045 13.7 0.4 1.1 1 0 0 1 1 1 0 Prefoldin subunit Bcr-Abl_Oligo PF09036.10 NODE_64484_length_249_cov_244.915888_g56543_i0forward_frame_3 - 0.095 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Bcr-Abl oncoprotein oligomerisation domain ZZ PF00569.17 NODE_64480_length_249_cov_413.719626_g56539_i0forward_frame_3 - 0.018 14.8 0.1 0.083 12.7 0.0 1.8 2 0 0 2 2 2 0 Zinc finger, ZZ type ERGIC_N PF13850.6 NODE_64480_length_249_cov_413.719626_g56539_i0forward_frame_3 - 0.026 14.8 0.1 0.033 14.5 0.1 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) FTSW_RODA_SPOVE PF01098.19 NODE_64480_length_249_cov_413.719626_g56539_i0forward_frame_3 - 0.12 11.3 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Cell cycle protein Tuberin PF03542.16 NODE_64480_length_249_cov_413.719626_g56539_i0forward_frame_3 - 0.14 11.2 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 Tuberin EF1_GNE PF00736.19 NODE_64479_length_249_cov_475.210280_g56538_i0reverse_frame_3 - 0.03 14.5 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 EF-1 guanine nucleotide exchange domain UNC119_bdg PF15435.6 NODE_64475_length_249_cov_8351.588785_g56534_i0forward_frame_2 - 0.062 12.8 0.0 0.085 12.4 0.0 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue Gag_spuma PF03276.14 ORF99973 - 0.23 9.9 5.8 0.24 9.8 5.8 1.0 1 0 0 1 1 1 0 Spumavirus gag protein Parathyroid PF01279.17 ORF99913 - 0.1 13.2 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 Parathyroid hormone family GRIN_C PF15235.6 ORF99913 - 0.22 11.7 0.1 0.27 11.4 0.1 1.1 1 0 0 1 1 1 0 G protein-regulated inducer of neurite outgrowth C-terminus DUF1706 PF08020.11 ORF99766 - 0.03 14.2 0.2 0.036 14.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1706) DUF2442 PF10387.9 ORF99766 - 0.1 12.9 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2442) COX8 PF02285.15 ORF99647 - 0.22 11.4 5.7 2.8 7.9 0.0 2.6 3 0 0 3 3 3 0 Cytochrome oxidase c subunit VIII adh_short_C2 PF13561.6 ORF99594 - 1.2e-19 70.8 0.0 1.4e-19 70.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF99594 - 0.00021 20.8 0.0 0.0003 20.3 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase zf-C3HC4_2 PF13923.6 ORF99473 - 9e-07 28.6 11.8 9e-07 28.6 11.8 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF99473 - 0.00037 20.3 15.4 0.0014 18.5 15.4 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 ORF99473 - 0.00094 19.0 7.5 0.0013 18.6 7.5 1.2 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-RING_2 PF13639.6 ORF99473 - 0.0019 18.5 13.3 0.0019 18.5 13.3 1.6 1 1 0 1 1 1 1 Ring finger domain zf-Nse PF11789.8 ORF99473 - 0.089 12.6 8.7 0.12 12.2 8.7 1.2 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Siva PF05458.12 ORF99473 - 0.13 11.9 9.2 0.14 11.8 9.2 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) zf-C3HC4_3 PF13920.6 ORF99473 - 0.46 10.4 16.1 0.3 11.0 14.3 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF99473 - 0.85 9.8 15.6 1.4 9.2 15.6 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING IBR PF01485.21 ORF99473 - 4.5 7.6 16.3 2.8 8.2 10.6 2.2 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain SHIPPO-rpt PF07004.12 ORF99346 - 0.00053 20.8 3.9 0.047 14.6 3.6 2.3 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat DUF3301 PF11743.8 ORF99346 - 0.19 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) CLASP_N PF12348.8 ORF9908 - 0.0031 17.1 0.5 0.0067 16.0 0.5 1.5 1 1 0 1 1 1 1 CLASP N terminal DUF2448 PF10476.9 ORF98534 - 0.0022 17.9 0.7 0.0026 17.7 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function C-terminus (DUF2448) SH3_19 PF18597.1 ORF985 - 0.0075 16.1 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Myosin X N-terminal SH3 domain DUF3297 PF11730.8 ORF97791 - 0.01 15.7 1.7 0.012 15.4 1.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3297) mRNA_cap_enzyme PF01331.19 ORF97791 - 0.37 10.6 10.3 0.37 10.6 10.3 1.0 1 0 0 1 1 1 0 mRNA capping enzyme, catalytic domain MORN PF02493.20 ORF97649 - 1.2e-07 31.2 7.2 0.0007 19.3 1.0 4.1 4 0 0 4 4 4 2 MORN repeat Bactofilin PF04519.13 ORF97649 - 0.049 13.9 0.1 0.058 13.7 0.1 1.1 1 0 0 1 1 1 0 Polymer-forming cytoskeletal Adaptin_N PF01602.20 ORF97634 - 0.00022 19.9 0.0 0.00022 19.9 0.0 1.0 1 0 0 1 1 1 1 Adaptin N terminal region ATG_C PF09333.11 ORF97601 - 0.15 12.5 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Autophagy-related protein C terminal domain TM231 PF10149.9 ORF97519 - 0.025 13.9 1.5 0.025 13.9 1.5 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 YebO PF13974.6 ORF97519 - 9.3 6.4 8.8 0.38 10.8 0.9 2.1 1 1 1 2 2 2 0 YebO-like protein DUF3297 PF11730.8 ORF97087 - 0.01 15.7 1.7 0.012 15.4 1.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3297) mRNA_cap_enzyme PF01331.19 ORF97087 - 0.37 10.6 10.3 0.37 10.6 10.3 1.0 1 0 0 1 1 1 0 mRNA capping enzyme, catalytic domain LemA PF04011.12 ORF96393 - 0.0096 15.8 3.0 0.011 15.6 3.0 1.0 1 0 0 1 1 1 1 LemA family CENP-Q PF13094.6 ORF96393 - 2.6 8.2 10.2 0.73 10.0 0.8 2.0 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit CCDC53 PF10152.9 ORF95246 - 5 7.5 13.0 5.3 7.4 13.0 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex CBP4 PF07960.11 ORF94762 - 0.028 14.3 0.5 0.034 14.0 0.5 1.2 1 0 0 1 1 1 0 CBP4 EF-hand_7 PF13499.6 ORF94458 - 3.2e-09 37.1 0.2 5e-09 36.5 0.2 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF94458 - 1.2e-08 33.9 6.8 0.00082 18.7 0.1 3.4 3 1 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF94458 - 1.7e-06 27.8 5.5 0.0012 18.6 1.4 3.2 1 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF94458 - 4.7e-06 26.1 3.1 0.00032 20.4 0.1 3.0 2 1 0 2 2 2 1 EF-hand domain EF-hand_4 PF12763.7 ORF94458 - 0.012 15.5 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF94458 - 0.019 15.3 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain EF-hand_5 PF13202.6 ORF94458 - 0.07 12.7 10.2 3 7.5 0.0 4.0 2 2 1 3 3 3 0 EF hand YiiD_C PF09500.10 ORF94339 - 0.034 14.0 0.0 0.042 13.7 0.0 1.1 1 0 0 1 1 1 0 Putative thioesterase (yiiD_Cterm) Myb_DNA-binding PF00249.31 ORF93977 - 0.025 14.8 0.1 0.04 14.1 0.1 1.4 1 0 0 1 1 1 0 Myb-like DNA-binding domain RMF PF04957.12 ORF9216 - 0.064 13.5 1.3 0.097 12.9 1.3 1.3 1 0 0 1 1 1 0 Ribosome modulation factor Fumarate_red_C PF02300.17 ORF91286 - 0.0041 17.2 0.8 0.0048 17.0 0.8 1.1 1 0 0 1 1 1 1 Fumarate reductase subunit C ASRT PF07100.11 ORF9111 - 0.11 12.5 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Anabaena sensory rhodopsin transducer Av_adeno_fibre PF06536.11 ORF91085 - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Avian adenovirus fibre, N-terminal OTCace PF00185.24 ORF91065 - 3.9e-21 75.7 0.1 4.4e-21 75.6 0.1 1.0 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E2 PF08199.11 ORF90746 - 0.0034 17.3 7.6 0.01 15.7 7.6 1.9 1 1 0 1 1 1 1 Bacteriophage E2-like protein Acetyltransf_10 PF13673.7 ORF90371 - 2.9e-13 49.9 0.0 3.1e-13 49.8 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF90371 - 2.8e-10 40.5 0.0 3.5e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF90371 - 3.9e-08 33.5 0.0 5e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 ORF90371 - 2.5e-05 24.1 0.0 7.3e-05 22.7 0.0 1.6 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF90371 - 0.014 15.5 0.0 0.017 15.3 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF90371 - 0.016 15.3 0.0 0.021 14.9 0.0 1.3 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase Pfk_N PF18468.1 ORF90371 - 0.032 14.6 0.0 0.04 14.3 0.0 1.2 1 0 0 1 1 1 0 Phosphofructokinase N-terminal domain yeast PanZ PF12568.8 ORF90371 - 0.067 12.9 0.0 0.078 12.7 0.0 1.2 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ zf_C2H2_13 PF18508.1 ORF89680 - 0.45 10.1 3.7 4.9 6.8 0.9 2.2 2 0 0 2 2 2 0 Zinc finger domain DUF3781 PF12636.7 ORF8956 - 0.042 13.7 0.1 0.058 13.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) Abhydrolase_3 PF07859.13 ORF89356 - 0.19 11.6 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold Tmpp129 PF10272.9 ORF88996 - 0.098 11.9 2.2 0.1 11.9 2.2 1.1 1 0 0 1 1 1 0 Putative transmembrane protein precursor DUF4215 PF13948.6 ORF88750 - 0.059 13.8 0.5 0.11 13.0 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4215) EamA PF00892.20 ORF88244 - 1.3e-05 25.4 0.8 1.5e-05 25.2 0.8 1.2 1 0 0 1 1 1 1 EamA-like transporter family PhoLip_ATPase_C PF16212.5 ORF88176 - 0.11 12.3 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal PrmC_N PF17827.1 ORF8794 - 0.05 14.2 0.1 0.08 13.5 0.1 1.3 1 0 0 1 1 1 0 PrmC N-terminal domain ATLF PF07737.11 ORF8794 - 0.11 11.8 0.1 0.12 11.6 0.1 1.1 1 0 0 1 1 1 0 Anthrax toxin lethal factor, N- and C-terminal domain Mlo PF03094.15 ORF87252 - 0.0097 14.3 1.3 0.011 14.1 1.3 1.0 1 0 0 1 1 1 1 Mlo family DUF2528 PF10800.8 ORF87030 - 0.041 14.5 0.2 0.048 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2528) bZIP_1 PF00170.21 ORF86581 - 1.1e-09 38.2 10.7 1.4e-09 37.9 10.5 1.3 1 1 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF86581 - 3e-05 24.0 10.3 3e-05 24.0 10.3 1.6 1 1 1 2 2 2 1 Basic region leucine zipper AKNA PF12443.8 ORF86581 - 0.0051 17.4 0.7 0.0061 17.2 0.7 1.1 1 0 0 1 1 1 1 AT-hook-containing transcription factor TSC22 PF01166.18 ORF86581 - 0.017 15.4 2.5 0.026 14.8 2.5 1.6 1 1 0 1 1 1 0 TSC-22/dip/bun family Sacchrp_dh_NADP PF03435.18 ORF86581 - 0.058 13.7 0.8 0.077 13.3 0.7 1.3 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DNA_pol_delta_4 PF04081.13 ORF86581 - 0.11 12.9 5.8 0.12 12.7 5.8 1.0 1 0 0 1 1 1 0 DNA polymerase delta, subunit 4 YabA PF06156.13 ORF86581 - 0.11 13.1 6.2 0.14 12.8 6.2 1.2 1 0 0 1 1 1 0 Initiation control protein YabA RFXA_RFXANK_bdg PF15289.6 ORF86581 - 0.12 12.7 5.1 0.14 12.5 5.1 1.0 1 0 0 1 1 1 0 Regulatory factor X-associated C-terminal binding domain DUF2407_C PF13373.6 ORF86581 - 0.14 12.3 2.5 0.15 12.2 2.5 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain SCO1-SenC PF02630.14 ORF86581 - 0.15 12.0 0.5 0.18 11.8 0.5 1.1 1 0 0 1 1 1 0 SCO1/SenC DivIC PF04977.15 ORF86581 - 0.34 10.7 6.4 0.27 11.0 5.0 1.6 1 1 0 1 1 1 0 Septum formation initiator FapA PF03961.13 ORF86581 - 0.78 8.3 5.9 0.88 8.1 5.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Wbp11 PF09429.10 ORF86581 - 0.89 10.0 14.4 1.4 9.4 14.4 1.3 1 1 0 1 1 1 0 WW domain binding protein 11 YtxH PF12732.7 ORF86581 - 1.4 9.5 4.0 2.1 8.9 4.0 1.4 1 1 0 1 1 1 0 YtxH-like protein TM231 PF10149.9 ORF86556 - 0.025 13.9 1.5 0.025 13.9 1.5 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 YebO PF13974.6 ORF86556 - 9.3 6.4 8.8 0.38 10.8 0.9 2.1 1 1 1 2 2 2 0 YebO-like protein ALAD PF00490.21 ORF8644 - 5.4e-26 91.5 0.1 5.8e-26 91.4 0.1 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Papilin_u7 PF16626.5 ORF85623 - 0.068 13.8 1.0 0.081 13.5 1.0 1.1 1 0 0 1 1 1 0 Linking region between Kunitz_BPTI and I-set on papilin TMEM132 PF16070.5 ORF8546 - 0.0013 18.2 0.1 0.0015 18.0 0.1 1.0 1 0 0 1 1 1 1 Transmembrane protein family 132 KIAA1430 PF13879.6 ORF84746 - 0.78 10.5 10.1 8.1 7.3 5.5 2.1 1 1 1 2 2 2 0 KIAA1430 homologue DUF3079 PF11278.8 ORF8461 - 0.06 13.2 0.2 0.081 12.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3079) VESA1_N PF12785.7 ORF83637 - 0.028 13.4 0.1 0.03 13.3 0.1 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 RMF PF04957.12 ORF83510 - 0.064 13.5 1.3 0.097 12.9 1.3 1.3 1 0 0 1 1 1 0 Ribosome modulation factor UL20 PF17582.2 ORF83374 - 0.35 10.1 4.4 0.29 10.4 4.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 UL20 PF17582.2 ORF82773 - 0.35 10.1 4.4 0.29 10.4 4.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 SH3_2 PF07653.17 ORF82576 - 0.00011 21.8 0.0 0.00051 19.7 0.0 1.8 2 0 0 2 2 2 1 Variant SH3 domain SH3_9 PF14604.6 ORF82576 - 0.00041 20.1 0.2 0.0014 18.5 0.1 1.9 2 1 0 2 2 2 1 Variant SH3 domain ACP_syn_III_C PF08541.10 ORF82576 - 0.066 13.4 0.0 0.09 13.0 0.0 1.2 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Amidohydro_1 PF01979.20 ORF82486 - 0.0047 16.3 0.1 0.0051 16.2 0.1 1.0 1 0 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.22 ORF82486 - 0.012 14.9 0.0 0.013 14.9 0.0 1.0 1 0 0 1 1 1 0 Adenosine/AMP deaminase Amidohydro_2 PF04909.14 ORF82486 - 0.019 14.7 0.0 0.022 14.6 0.0 1.0 1 0 0 1 1 1 0 Amidohydrolase LAGLIDADG_1 PF00961.19 ORF82400 - 0.0017 19.3 0.9 0.0021 19.0 0.9 1.2 1 0 0 1 1 1 1 LAGLIDADG endonuclease LRRNT PF01462.18 ORF8238 - 0.062 13.0 1.6 0.11 12.2 1.6 1.4 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain PTPA PF03095.15 ORF81915 - 0.17 11.3 0.1 0.2 11.1 0.1 1.0 1 0 0 1 1 1 0 Phosphotyrosyl phosphate activator (PTPA) protein MipZ PF09140.11 ORF81146 - 0.027 13.7 0.0 0.027 13.7 0.0 1.1 1 0 0 1 1 1 0 ATPase MipZ AAT PF03417.16 ORF80963 - 0.11 12.1 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Thioredoxin_16 PF18569.1 ORF80922 - 0.072 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain Hydantoinase_B PF02538.14 ORF80922 - 0.13 10.6 0.0 0.13 10.6 0.0 1.0 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase MCM_lid PF17855.1 ORF80689 - 0.032 14.6 0.2 0.047 14.1 0.2 1.2 1 0 0 1 1 1 0 MCM AAA-lid domain zf-Tim10_DDP PF02953.15 ORF80464 - 6.6e-09 35.3 3.1 8.8e-09 34.9 3.1 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Atx10homo_assoc PF09759.9 ORF80464 - 0.054 13.5 0.2 0.059 13.4 0.2 1.1 1 0 0 1 1 1 0 Spinocerebellar ataxia type 10 protein domain Hormone_recep PF00104.30 ORF80464 - 0.1 12.2 0.8 0.12 12.0 0.8 1.0 1 0 0 1 1 1 0 Ligand-binding domain of nuclear hormone receptor Rhomboid PF01694.22 ORF80334 - 3e-05 24.0 0.9 0.00012 22.1 0.1 1.9 1 1 1 2 2 2 1 Rhomboid family DUF1398 PF07166.11 ORF80334 - 0.01 15.9 0.0 0.014 15.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) DUF3007 PF11460.8 ORF80298 - 6.6 7.1 7.5 8.6 6.7 7.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) UPF0182 PF03699.13 ORF80298 - 6.7 4.7 8.6 6.7 4.7 8.6 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) PMD PF10536.9 ORF80208 - 0.04 13.0 0.0 0.042 13.0 0.0 1.0 1 0 0 1 1 1 0 Plant mobile domain DUF3342 PF11822.8 ORF80208 - 0.049 13.8 0.0 0.063 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) YbgT_YccB PF08173.11 ORF80208 - 0.071 13.2 0.2 0.071 13.2 0.2 1.7 2 0 0 2 2 2 0 Membrane bound YbgT-like protein TM231 PF10149.9 ORF79188 - 0.025 13.9 1.5 0.025 13.9 1.5 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 YebO PF13974.6 ORF79188 - 9.3 6.4 8.8 0.38 10.8 0.9 2.1 1 1 1 2 2 2 0 YebO-like protein GCIP PF13324.6 ORF79037 - 0.032 13.9 1.2 0.031 13.9 1.2 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting YgaB PF14182.6 ORF79037 - 0.073 13.5 3.0 0.091 13.2 3.0 1.2 1 0 0 1 1 1 0 YgaB-like protein HD PF01966.22 ORF78467 - 0.1 12.8 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 HD domain Gp-FAR-1 PF05823.12 ORF77796 - 0.034 14.5 1.0 0.039 14.3 1.0 1.1 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Enolase_C PF00113.22 ORF77475 - 0.21 10.8 2.1 0.2 10.8 2.1 1.0 1 0 0 1 1 1 0 Enolase, C-terminal TIM barrel domain DUF1189 PF06691.11 ORF77475 - 0.3 10.6 2.1 0.33 10.5 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) DUF3736 PF12540.8 ORF77406 - 0.039 14.1 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3736) DUF4232 PF14016.6 ORF77076 - 0.0073 16.4 0.0 0.0086 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4232) EGF PF00008.27 ORF76328 - 0.033 14.5 0.5 0.048 14.0 0.5 1.3 1 0 0 1 1 1 0 EGF-like domain HhH-GPD PF00730.25 ORF76088 - 0.016 15.6 0.0 0.017 15.5 0.0 1.3 1 1 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein DUF5622 PF18533.1 ORF76088 - 0.045 13.9 0.1 0.066 13.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5622) NAD_binding_7 PF13241.6 ORF76088 - 0.051 14.0 0.0 0.059 13.8 0.0 1.1 1 0 0 1 1 1 0 Putative NAD(P)-binding DUF4980 PF16352.5 ORF76088 - 0.19 11.8 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4980) Phage_holin_3_6 PF07332.11 ORF75999 - 4.2e-12 46.1 3.0 4.6e-12 46.0 3.0 1.0 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III TMEM220 PF15071.6 ORF75999 - 0.018 15.8 0.1 0.021 15.5 0.1 1.1 1 0 0 1 1 1 0 Transmembrane family 220, helix DUF3043 PF11241.8 ORF75999 - 0.02 14.9 0.9 0.021 14.8 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Tetraspanin PF00335.20 ORF75999 - 0.078 12.7 2.0 0.09 12.5 2.0 1.1 1 0 0 1 1 1 0 Tetraspanin family FixQ PF05545.11 ORF75999 - 0.096 12.7 1.3 0.44 10.6 0.0 2.1 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ DUF373 PF04123.13 ORF75999 - 0.1 12.0 0.3 0.11 11.9 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) FtsX PF02687.21 ORF75999 - 0.15 12.5 4.1 0.19 12.2 4.1 1.2 1 0 0 1 1 1 0 FtsX-like permease family CCB1 PF12046.8 ORF75999 - 0.32 10.3 2.8 0.22 10.8 0.2 1.8 1 1 1 2 2 2 0 Cofactor assembly of complex C subunit B DUF4131 PF13567.6 ORF75999 - 0.32 10.6 2.4 0.33 10.6 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF983 PF06170.12 ORF75999 - 0.37 11.2 3.0 0.45 10.9 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF983) Phage_Gp23 PF10669.9 ORF75999 - 1.9 8.8 4.2 1.2 9.5 0.1 1.9 1 1 1 2 2 2 0 Protein gp23 (Bacteriophage A118) ERGIC_N PF13850.6 ORF74550 - 0.003 17.9 0.3 0.0034 17.7 0.3 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Pertussis_S2S3 PF02918.15 ORF74550 - 0.046 13.7 0.0 0.058 13.3 0.0 1.2 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain DUF792 PF05632.11 ORF73560 - 0.026 14.4 0.0 0.03 14.2 0.0 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF792) LPD23 PF18838.1 ORF73358 - 0.16 11.8 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 23 WES_acyltransf PF03007.16 ORF73257 - 1e-09 38.5 0.0 1.2e-09 38.3 0.0 1.0 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF73257 - 0.011 14.4 0.2 0.011 14.4 0.2 1.1 1 0 0 1 1 1 0 Alcohol acetyltransferase SRR PF07709.11 ORF72696 - 0.035 14.4 0.2 0.67 10.6 0.0 2.5 2 0 0 2 2 2 0 Seven Residue Repeat L_protein_N PF15518.6 ORF71467 - 0.13 12.2 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 L protein N-terminus ANAPC4_WD40 PF12894.7 ORF71301 - 1.5e-06 28.4 0.0 1.7e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF71301 - 0.04 13.2 0.3 0.046 13.0 0.3 1.1 1 0 0 1 1 1 0 WD40-like domain Pkinase PF00069.25 ORF70978 - 9.4e-16 58.0 0.3 1e-15 57.8 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70978 - 6.4e-11 42.0 0.2 7e-11 41.9 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF70978 - 7.1e-05 21.9 0.1 7.9e-05 21.8 0.1 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF70978 - 0.01 15.2 0.0 0.011 15.0 0.0 1.0 1 0 0 1 1 1 0 Kinase-like RIO1 PF01163.22 ORF70978 - 0.016 14.8 0.1 0.017 14.7 0.1 1.1 1 0 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF70978 - 0.023 14.0 0.0 0.026 13.9 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family TALPID3 PF15324.6 ORF70762 - 0.014 13.1 0.3 0.014 13.1 0.3 1.0 1 0 0 1 1 1 0 Hedgehog signalling target DUF4252 PF14060.6 ORF70762 - 0.083 12.8 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) Adaptin_binding PF10199.9 ORF70762 - 0.12 12.9 1.5 0.17 12.5 1.5 1.3 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 E2 PF08199.11 ORF70298 - 0.0034 17.3 7.6 0.01 15.7 7.6 1.9 1 1 0 1 1 1 1 Bacteriophage E2-like protein Ribosomal_S6 PF01250.17 ORF70008 - 5.3e-10 39.4 0.0 6.1e-10 39.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S6 MIR PF02815.19 ORF69846 - 9.9e-06 25.5 0.0 1.2e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 MIR domain Med17 PF10156.9 ORF69785 - 0.094 11.4 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Subunit 17 of Mediator complex Papilin_u7 PF16626.5 ORF69378 - 0.068 13.8 1.0 0.081 13.5 1.0 1.1 1 0 0 1 1 1 0 Linking region between Kunitz_BPTI and I-set on papilin Hit1_C PF18268.1 ORF68257 - 0.011 15.8 0.0 0.013 15.7 0.0 1.2 1 0 0 1 1 1 0 Hit1 C-terminal Occludin_ELL PF07303.13 ORF67091 - 0.2 12.4 4.2 0.46 11.2 4.2 1.6 1 1 0 1 1 1 0 Occludin homology domain NIF PF03031.18 ORF6708 - 4.1e-05 23.4 0.0 4.5e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase SPATA9 PF15824.5 ORF66865 - 0.09 12.0 0.8 0.13 11.6 0.8 1.2 1 1 0 1 1 1 0 Spermatogenesis-associated protein 9 DUF5421 PF17458.2 ORF66561 - 0.19 11.1 0.0 0.2 11.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5421) ShK PF01549.24 ORF66548 - 0.28 11.8 5.8 0.19 12.3 2.0 2.4 2 1 0 2 2 2 0 ShK domain-like BcsB PF03170.13 ORF66219 - 0.1 11.0 0.1 0.099 11.0 0.1 1.0 1 0 0 1 1 1 0 Bacterial cellulose synthase subunit Stevor PF17410.2 ORF66219 - 0.26 10.8 2.0 0.29 10.6 2.0 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame RCDG1 PF15725.5 ORF65703 - 0.0071 16.7 2.9 0.01 16.3 2.9 1.1 1 0 0 1 1 1 1 Renal cancer differentiation gene 1 protein DDE_3 PF13358.6 ORF65601 - 0.0069 16.1 0.0 0.0088 15.8 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease Bcl-2_BAD PF10514.9 ORF6539 - 0.08 13.4 0.6 0.12 12.9 0.3 1.4 1 1 0 1 1 1 0 Pro-apoptotic Bcl-2 protein, BAD Metallothio_Cad PF07846.11 ORF65306 - 0.26 11.4 1.7 17 5.6 0.0 3.0 3 0 0 3 3 3 0 Metallothionein family TSP_1 PF00090.19 ORF65306 - 0.43 10.8 3.1 7.8 6.8 0.5 2.1 1 1 1 2 2 2 0 Thrombospondin type 1 domain Topoisom_I PF01028.20 ORF65154 - 0.003 16.8 0.8 0.0053 16.0 0.8 1.5 1 1 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core DnaA_N PF11638.8 ORF65154 - 0.07 12.9 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 DnaA N-terminal domain Av_adeno_fibre PF06536.11 ORF64648 - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Avian adenovirus fibre, N-terminal Aldo_ket_red PF00248.21 ORF64131 - 8.2e-12 44.9 0.1 9.3e-12 44.7 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Biliv-reduc_cat PF09166.10 ORF63750 - 0.028 14.8 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 Biliverdin reductase, catalytic Med7 PF05983.11 ORF63717 - 0.034 14.2 2.0 0.041 14.0 2.0 1.1 1 0 0 1 1 1 0 MED7 protein FGAR-AT_N PF18076.1 ORF62840 - 0.018 15.0 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase N-terminal Rod_cone_degen PF15201.6 ORF62504 - 0.075 13.1 0.1 0.075 13.1 0.1 1.9 2 0 0 2 2 2 0 Progressive rod-cone degeneration Anthrax-tox_M PF09156.10 ORF62351 - 0.15 11.3 0.0 0.18 11.1 0.0 1.0 1 0 0 1 1 1 0 Anthrax toxin lethal factor, middle domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks295.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks295.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks295.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks295.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- THB PF18362.1 ORF62295 - 0.09 12.4 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Tri-helix bundle domain DUF3397 PF11877.8 ORF61875 - 0.88 9.8 14.7 8.8 6.6 14.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3397) FabA PF07977.13 ORF61228 - 4.1e-15 55.6 0.0 4.5e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 FabA-like domain MaoC_dehydratas PF01575.19 ORF61228 - 0.022 14.3 0.0 0.024 14.2 0.0 1.1 1 0 0 1 1 1 0 MaoC like domain 4HBT PF03061.22 ORF61228 - 0.081 13.3 0.0 0.12 12.7 0.0 1.5 1 1 0 1 1 1 0 Thioesterase superfamily Pyridoxal_deC PF00282.19 ORF61063 - 1.2e-18 67.0 0.0 1.3e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 ORF61063 - 0.0046 16.3 0.0 0.0046 16.3 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 ORF61063 - 0.086 11.8 0.0 0.086 11.8 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-V zf-SAP30 PF13866.6 ORF61 - 0.56 10.3 6.3 0.42 10.8 2.1 2.0 2 0 0 2 2 2 0 SAP30 zinc-finger DUF1158 PF06643.11 ORF60893 - 1.2e-45 153.9 9.1 1.3e-45 153.8 9.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1158) DUF1236 PF06823.12 ORF60821 - 0.032 14.1 0.1 0.046 13.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1236) ERGIC_N PF13850.6 ORF59874 - 0.0036 17.6 0.4 0.0043 17.4 0.4 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Pertussis_S2S3 PF02918.15 ORF59874 - 0.046 13.7 0.0 0.058 13.3 0.0 1.2 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain TALPID3 PF15324.6 ORF59677 - 0.014 13.1 0.3 0.014 13.1 0.3 1.0 1 0 0 1 1 1 0 Hedgehog signalling target DUF4252 PF14060.6 ORF59677 - 0.083 12.8 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) Adaptin_binding PF10199.9 ORF59677 - 0.12 12.9 1.5 0.17 12.5 1.5 1.3 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 DUF812 PF05667.11 ORF59580 - 0.0088 15.0 5.4 0.0096 14.9 5.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) FH2 PF02181.23 ORF59580 - 0.0089 15.2 1.4 0.0093 15.1 1.4 1.0 1 0 0 1 1 1 1 Formin Homology 2 Domain DUF2815 PF10991.8 ORF59580 - 0.081 12.9 1.6 0.1 12.5 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2815) MMPL PF03176.15 ORF59580 - 0.26 10.2 2.0 0.32 9.9 2.0 1.3 1 1 0 1 1 1 0 MMPL family Borrelia_P83 PF05262.11 ORF59580 - 0.28 9.6 4.2 0.26 9.7 4.2 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein PilN PF05137.13 ORF59226 - 0.039 14.1 0.1 0.049 13.8 0.1 1.1 1 0 0 1 1 1 0 Fimbrial assembly protein (PilN) AA_permease_N PF08403.10 ORF59226 - 0.12 11.9 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Amino acid permease N-terminal Med4 PF10018.9 ORF5904 - 0.17 11.6 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF35_N PF12172.8 ORF58932 - 0.13 12.1 0.5 0.13 12.1 0.5 1.6 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF223 PF02721.14 ORF58798 - 0.0064 16.8 0.2 0.0074 16.6 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF223 hNIFK_binding PF12196.8 ORF58524 - 0.24 10.9 1.3 0.35 10.4 1.3 1.3 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK TPR_12 PF13424.6 ORF58166 - 4.8e-08 33.2 0.0 2.4e-07 30.9 0.0 1.8 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF58166 - 1.7e-06 27.6 0.0 0.00059 19.7 0.0 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF58166 - 1.1e-05 25.1 0.0 0.067 13.1 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF58166 - 2.1e-05 25.1 0.0 0.00068 20.2 0.0 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF58166 - 0.00054 20.4 0.0 0.13 12.8 0.0 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat PPR_1 PF12854.7 ORF58166 - 0.0038 16.9 0.2 0.4 10.4 0.1 2.3 2 0 0 2 2 2 1 PPR repeat TPR_4 PF07721.14 ORF58166 - 0.0048 17.4 0.1 5.2 8.0 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF58166 - 0.01 15.3 0.1 0.011 15.1 0.1 1.1 1 0 0 1 1 1 0 MalT-like TPR region TPR_1 PF00515.28 ORF58166 - 0.017 14.9 0.0 0.046 13.6 0.0 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat PPR PF01535.20 ORF58166 - 0.022 15.0 0.4 3.3 8.1 0.2 2.5 3 0 0 3 3 2 0 PPR repeat TPR_17 PF13431.6 ORF58166 - 0.03 14.7 0.0 0.72 10.4 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF58166 - 0.031 14.4 0.1 0.41 10.9 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF58166 - 0.036 14.9 0.1 1.1 10.3 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF58166 - 0.042 14.1 0.0 0.34 11.2 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat RPN6_N PF18055.1 ORF58166 - 0.074 13.4 0.0 0.08 13.3 0.0 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN6 N-terminal domain 14-3-3 PF00244.20 ORF58166 - 0.081 12.4 0.0 0.081 12.4 0.0 1.2 1 0 0 1 1 1 0 14-3-3 protein YjgF_endoribonc PF14588.6 ORF58166 - 0.083 13.0 0.0 0.097 12.8 0.0 1.0 1 0 0 1 1 1 0 YjgF/chorismate_mutase-like, putative endoribonuclease PGP_phosphatase PF09419.10 ORF58166 - 0.091 12.4 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase Ank_5 PF13857.6 ORF57543 - 3.3e-14 52.8 0.7 1.3e-07 31.7 0.2 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF57543 - 4.3e-13 49.6 0.1 5e-13 49.5 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF57543 - 1.2e-09 38.2 0.1 6.6e-05 23.2 0.1 2.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF57543 - 1.2e-09 38.5 0.1 1.5e-09 38.2 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF57543 - 2.7e-08 33.4 0.1 0.01 16.3 0.0 2.5 3 0 0 3 3 3 2 Ankyrin repeat zf-rbx1 PF12678.7 ORF57441 - 3e-06 27.4 3.8 4.4e-06 26.9 3.8 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF57441 - 3.1e-06 27.2 1.2 4.1e-06 26.7 1.2 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_2 PF13639.6 ORF57441 - 2.2e-05 24.7 4.7 2.2e-05 24.7 4.7 1.6 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 ORF57441 - 0.0015 18.3 2.9 0.0027 17.6 2.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 ORF57441 - 0.0024 17.7 4.2 0.0024 17.7 4.2 1.9 2 1 1 3 3 2 1 PHD-finger C1_1 PF00130.22 ORF57441 - 0.019 14.8 2.3 0.019 14.8 2.3 1.7 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RING_4 PF14570.6 ORF57441 - 0.02 14.7 4.0 0.031 14.0 4.0 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_5 PF14634.6 ORF57441 - 0.022 14.7 3.0 0.038 14.0 3.0 1.4 1 0 0 1 1 1 0 zinc-RING finger domain zf-PHD-like PF15446.6 ORF57441 - 0.025 14.2 1.1 0.028 14.1 0.4 1.5 2 0 0 2 2 2 0 PHD/FYVE-zinc-finger like domain Zn_ribbon_17 PF17120.5 ORF57441 - 0.028 14.0 5.4 0.053 13.1 5.4 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type Rtf2 PF04641.12 ORF57441 - 0.033 13.6 0.1 0.034 13.5 0.1 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger zf-C3HC4_3 PF13920.6 ORF57441 - 0.056 13.3 6.3 0.22 11.4 6.3 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF57441 - 0.078 13.1 6.7 0.1 12.8 4.8 2.1 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING Zf_RING PF16744.5 ORF57441 - 0.081 13.1 2.0 0.14 12.3 0.9 1.8 1 1 1 2 2 2 0 KIAA1045 RING finger Prok-RING_1 PF14446.6 ORF57441 - 0.11 12.4 0.6 0.11 12.4 0.6 2.7 2 1 1 3 3 3 0 Prokaryotic RING finger family 1 zf-RING-like PF08746.11 ORF57441 - 0.12 12.7 4.1 0.21 11.9 4.1 1.4 1 0 0 1 1 1 0 RING-like domain zf-RING_UBOX PF13445.6 ORF57441 - 0.24 11.5 6.5 0.39 10.8 4.7 2.1 1 1 1 2 2 2 0 RING-type zinc-finger DUF2310 PF10071.9 ORF57441 - 0.41 9.9 2.1 0.57 9.4 2.1 1.2 1 0 0 1 1 1 0 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) zf-C3HC4_2 PF13923.6 ORF57441 - 1.1 9.2 9.2 4.7 7.1 9.2 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) IBR PF01485.21 ORF57441 - 2.2 8.5 10.5 3.6 7.9 3.0 2.4 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain DNA_pol3_tau_4 PF12168.8 ORF57324 - 0.051 14.1 2.4 0.063 13.8 2.4 1.2 1 0 0 1 1 1 0 DNA polymerase III subunits tau domain IV DnaB-binding DUF2768 PF10966.8 ORF56809 - 0.099 13.1 2.5 0.27 11.7 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2768) Spexin PF15171.6 ORF56253 - 0.0029 17.8 0.0 0.0036 17.5 0.0 1.2 1 0 0 1 1 1 1 Neuropeptide secretory protein family, NPQ, spexin PLCC PF14466.6 ORF56093 - 0.041 14.0 0.2 0.051 13.7 0.2 1.1 1 0 0 1 1 1 0 PLAT/LH2 and C2-like Ca2+-binding lipoprotein SHIPPO-rpt PF07004.12 ORF56003 - 0.00053 20.8 3.9 0.047 14.6 3.6 2.3 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat DUF3301 PF11743.8 ORF56003 - 0.19 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) TM231 PF10149.9 ORF55874 - 0.025 13.9 1.5 0.025 13.9 1.5 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 YebO PF13974.6 ORF55874 - 9.3 6.4 8.8 0.38 10.8 0.9 2.1 1 1 1 2 2 2 0 YebO-like protein Clr5 PF14420.6 ORF55692 - 0.041 14.1 0.7 0.059 13.6 0.7 1.3 1 0 0 1 1 1 0 Clr5 domain Chal_sti_synt_N PF00195.19 ORF5563 - 0.032 13.6 0.0 0.033 13.6 0.0 1.2 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain WD40 PF00400.32 ORF54609 - 5.8e-09 36.4 0.0 6.3e-08 33.2 0.0 2.0 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF54609 - 0.053 13.8 0.0 0.06 13.6 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain TPR_12 PF13424.6 ORF54130 - 0.00026 21.2 0.2 0.00032 20.9 0.2 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat Mit_ribos_Mrp51 PF11709.8 ORF54127 - 0.015 14.9 2.8 0.015 14.9 2.8 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit Rgp1 PF08737.10 ORF53535 - 0.0064 15.7 0.2 0.0076 15.5 0.2 1.0 1 0 0 1 1 1 1 Rgp1 Tubulin_C PF03953.17 ORF53254 - 0.0012 19.0 0.1 0.0015 18.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain TPR_12 PF13424.6 ORF52674 - 0.00026 21.2 0.2 0.00032 20.9 0.2 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat SH3_14 PF18343.1 ORF52404 - 0.11 12.5 0.5 0.13 12.3 0.5 1.1 1 0 0 1 1 1 0 Dda helicase SH3 domain DUF5399 PF17377.2 ORF51733 - 0.054 13.3 0.1 0.057 13.2 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5399) Pneumovirus_M2 PF06436.11 ORF51138 - 0.025 14.1 0.2 0.027 14.0 0.2 1.1 1 0 0 1 1 1 0 Pneumovirus matrix protein 2 (M2) TerY_C PF15616.6 ORF50005 - 0.13 12.3 0.3 0.17 12.0 0.3 1.2 1 0 0 1 1 1 0 TerY-C metal binding domain Mnd1 PF03962.15 ORF49979 - 0.19 12.1 0.0 0.28 11.5 0.0 1.3 1 0 0 1 1 1 0 Mnd1 HTH domain Pkinase PF00069.25 ORF49493 - 6.4e-05 22.4 0.1 0.0001 21.7 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49493 - 0.065 12.5 0.1 0.09 12.0 0.1 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase DUF3157 PF11355.8 ORF49444 - 0.11 12.1 7.8 0.13 11.9 7.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3157) Med3 PF11593.8 ORF49444 - 0.15 11.3 13.5 0.14 11.3 13.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal VitD-bind_III PF09164.10 ORF49175 - 4.2 7.4 9.9 2.5 8.1 1.7 2.2 1 1 1 2 2 2 0 Vitamin D binding protein, domain III DUF5129 PF17173.4 ORF49102 - 0.07 12.2 0.1 0.078 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) EF-hand_6 PF13405.6 ORF48339 - 0.011 15.6 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_13 PF17958.1 ORF48339 - 0.058 13.2 0.0 0.098 12.5 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 ORF48339 - 0.084 12.5 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 EF hand DUF3736 PF12540.8 ORF47946 - 0.039 14.1 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3736) CoA_binding_3 PF13727.6 ORF47398 - 4.5 7.3 7.1 0.48 10.4 1.9 1.8 1 1 1 2 2 2 0 CoA-binding domain DUF1128 PF06569.11 ORF47207 - 0.4 10.7 5.9 0.099 12.6 1.9 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1128) DBB PF14545.6 ORF47002 - 0.03 14.2 0.1 0.032 14.1 0.1 1.1 1 0 0 1 1 1 0 Dof, BCAP, and BANK (DBB) motif, DUF4902 PF16245.5 ORF4634 - 0.023 14.6 0.0 0.036 14.0 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4902) PH_TFIIH PF08567.11 ORF45842 - 0.075 13.4 0.3 0.086 13.2 0.3 1.1 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain SMN PF06003.12 ORF45274 - 0.029 13.6 0.1 0.03 13.6 0.1 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) PknG_rubred PF16919.5 ORF44409 - 0.002 18.3 0.2 0.002 18.3 0.2 1.1 1 0 0 1 1 1 1 Protein kinase G rubredoxin domain CUB_2 PF02408.20 ORF43632 - 0.021 14.6 0.2 0.023 14.5 0.2 1.1 1 0 0 1 1 1 0 CUB-like domain COLFI PF01410.18 ORF43632 - 0.11 11.8 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 Fibrillar collagen C-terminal domain TAN PF11640.8 ORF43586 - 0.067 13.3 0.0 0.081 13.1 0.0 1.1 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair DUF3086 PF11285.8 ORF43572 - 0.062 12.4 2.3 0.072 12.2 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) PVL_ORF50 PF07768.11 ORF43572 - 0.077 13.3 4.1 0.092 13.1 4.1 1.2 1 0 0 1 1 1 0 PVL ORF-50-like family UPF0239 PF06783.11 ORF43572 - 4.9 7.4 7.5 6.6 7.0 7.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) FAM91_C PF14648.6 ORF4347 - 0.074 11.9 0.0 0.074 11.9 0.0 1.1 1 0 0 1 1 1 0 FAM91 C-terminus Ribosomal_S16 PF00886.19 ORF43335 - 1.7e-24 85.7 0.0 2e-24 85.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S16 Nucleoside_tran PF01733.18 ORF43157 - 8.9e-06 25.3 2.3 9.3e-06 25.2 2.3 1.0 1 0 0 1 1 1 1 Nucleoside transporter Ldr_toxin PF13940.6 ORF4207 - 0.13 12.3 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system DNA_ligase_C PF17879.1 ORF41974 - 0.15 12.1 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 DNA ligase C-terminal domain Cullin_binding PF03556.15 ORF41376 - 6.6e-15 55.6 0.6 7.2e-15 55.5 0.6 1.0 1 0 0 1 1 1 1 Cullin binding Papilin_u7 PF16626.5 ORF41359 - 0.068 13.8 1.0 0.081 13.5 1.0 1.1 1 0 0 1 1 1 0 Linking region between Kunitz_BPTI and I-set on papilin P68HR PF08061.11 ORF4090 - 0.033 14.3 0.1 0.06 13.5 0.1 1.4 1 0 0 1 1 1 0 P68HR (NUC004) repeat ADP_PFK_GK PF04587.15 ORF4075 - 0.27 9.8 1.6 0.29 9.6 1.6 1.0 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region CBM49 PF09478.10 ORF38821 - 0.017 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate binding domain CBM49 FBPase_2 PF06874.11 ORF38821 - 0.09 11.1 0.5 0.1 10.8 0.5 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase DUF282 PF03380.14 ORF38796 - 0.19 11.7 1.2 0.25 11.3 0.3 1.7 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF282 L_protein_N PF15518.6 ORF38784 - 0.13 12.2 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 L protein N-terminus CBM49 PF09478.10 ORF3742 - 0.017 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate binding domain CBM49 FBPase_2 PF06874.11 ORF3742 - 0.09 11.1 0.5 0.1 10.8 0.5 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase TRI5 PF06330.11 ORF3701 - 0.034 13.0 0.0 0.034 13.0 0.0 1.0 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) MORN PF02493.20 ORF36253 - 1.2e-07 31.2 7.2 0.0007 19.3 1.0 4.1 4 0 0 4 4 4 2 MORN repeat Bactofilin PF04519.13 ORF36253 - 0.049 13.9 0.1 0.058 13.7 0.1 1.1 1 0 0 1 1 1 0 Polymer-forming cytoskeletal DUF4222 PF13973.6 ORF35893 - 2 8.1 5.2 3.4 7.3 3.2 2.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4222) FSA_C PF10479.9 ORF35819 - 0.19 9.8 0.4 0.22 9.6 0.4 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Myc_target_1 PF15179.6 ORF35502 - 0.026 14.4 0.7 0.027 14.4 0.7 1.1 1 0 0 1 1 1 0 Myc target protein 1 Glyco_hydro_98C PF08307.11 ORF34692 - 0.0011 18.5 1.9 0.0011 18.5 1.9 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 98 C-terminal domain GPR15L PF15854.5 ORF3444 - 0.16 12.3 3.6 0.1 12.9 1.5 1.7 2 0 0 2 2 2 0 G-protein coupled receptor ligand 15 SH3_19 PF18597.1 ORF34284 - 0.0075 16.1 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Myosin X N-terminal SH3 domain NUDIX PF00293.28 ORF34279 - 0.00029 20.9 0.0 0.00034 20.6 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain DctM PF06808.12 ORF34058 - 0.21 10.4 0.9 0.24 10.2 0.9 1.0 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporter, DctM component Anthrax-tox_M PF09156.10 ORF3394 - 0.15 11.3 0.0 0.18 11.1 0.0 1.0 1 0 0 1 1 1 0 Anthrax toxin lethal factor, middle domain Plant_NMP1 PF06694.11 ORF33879 - 0.016 14.3 0.1 0.017 14.2 0.1 1.0 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) LRV PF01816.17 ORF33855 - 0.19 12.2 0.5 0.45 11.0 0.1 1.8 2 0 0 2 2 2 0 Leucine rich repeat variant UL20 PF17582.2 ORF33773 - 0.35 10.1 4.4 0.29 10.4 4.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 DUF3617 PF12276.8 ORF33452 - 0.034 14.5 0.0 0.041 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3617) HP_OMP PF01856.17 ORF33034 - 0.052 13.6 0.0 0.061 13.4 0.0 1.0 1 0 0 1 1 1 0 Helicobacter outer membrane protein DUF543 PF04418.12 ORF3247 - 0.067 13.2 0.2 0.1 12.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF543) Cation_efflux PF01545.21 ORF32191 - 0.043 13.6 0.2 0.05 13.3 0.2 1.2 1 0 0 1 1 1 0 Cation efflux family DUF543 PF04418.12 ORF31882 - 0.067 13.2 0.2 0.1 12.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF543) Fumarate_red_C PF02300.17 ORF31740 - 0.0041 17.2 0.8 0.0048 17.0 0.8 1.1 1 0 0 1 1 1 1 Fumarate reductase subunit C DUF4232 PF14016.6 ORF31578 - 0.0073 16.4 0.0 0.0086 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4232) Cyclin_N PF00134.23 ORF31160 - 4.4e-09 36.1 0.0 4.8e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain bZIP_Maf PF03131.17 ORF30970 - 0.086 13.4 1.8 0.11 13.0 1.8 1.1 1 0 0 1 1 1 0 bZIP Maf transcription factor DUF1283 PF06932.11 ORF30689 - 0.13 12.5 2.9 0.51 10.6 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1283) Alkyl_sulf_C PF14864.6 ORF30079 - 0.055 13.7 1.0 0.067 13.5 1.0 1.1 1 0 0 1 1 1 0 Alkyl sulfatase C-terminal DUF4407 PF14362.6 ORF29869 - 3.3e-05 23.4 5.9 3.4e-05 23.4 5.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) DHR10 PF18595.1 ORF29869 - 0.00095 19.2 11.1 0.0011 19.0 11.1 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain PI3K_P85_iSH2 PF16454.5 ORF29869 - 0.0017 18.0 9.1 0.0019 17.8 9.1 1.1 1 0 0 1 1 1 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain TPR_MLP1_2 PF07926.12 ORF29869 - 0.0022 18.1 8.0 0.0026 17.8 8.0 1.2 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein TMF_DNA_bd PF12329.8 ORF29869 - 0.0022 17.9 12.8 0.056 13.5 3.3 2.3 1 1 1 2 2 2 2 TATA element modulatory factor 1 DNA binding Tropomyosin_1 PF12718.7 ORF29869 - 0.0023 18.1 13.9 0.016 15.4 7.8 2.0 1 1 1 2 2 2 1 Tropomyosin like ADIP PF11559.8 ORF29869 - 0.0025 17.9 11.0 0.003 17.7 11.0 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding UPF0242 PF06785.11 ORF29869 - 0.0029 17.8 12.4 0.0032 17.6 12.4 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Csm1_N PF18504.1 ORF29869 - 0.0038 17.5 11.8 0.039 14.3 2.1 2.3 1 1 1 2 2 2 1 Csm1 N-terminal domain TMF_TATA_bd PF12325.8 ORF29869 - 0.0056 16.9 9.5 0.0064 16.7 9.5 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding COG2 PF06148.11 ORF29869 - 0.0072 16.4 3.5 0.01 15.9 3.5 1.2 1 0 0 1 1 1 1 COG (conserved oligomeric Golgi) complex component, COG2 Occludin_ELL PF07303.13 ORF29869 - 0.0083 16.8 7.1 0.01 16.6 7.1 1.2 1 0 0 1 1 1 1 Occludin homology domain CLZ PF16526.5 ORF29869 - 0.0084 16.5 9.4 0.16 12.4 3.7 2.1 1 1 1 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF16 PF01519.16 ORF29869 - 0.0092 16.5 8.6 0.055 14.0 8.6 1.8 1 1 0 1 1 1 1 Protein of unknown function DUF16 YlqD PF11068.8 ORF29869 - 0.0098 16.3 7.3 0.012 16.0 7.3 1.1 1 0 0 1 1 1 1 YlqD protein Cep57_CLD_2 PF14197.6 ORF29869 - 0.0099 15.9 10.7 0.024 14.7 10.7 1.7 1 1 0 1 1 1 1 Centrosome localisation domain of PPC89 Trimer_CC PF08954.11 ORF29869 - 0.013 15.0 11.3 0.035 13.6 0.8 2.7 2 1 1 3 3 3 0 Trimerisation motif Golgin_A5 PF09787.9 ORF29869 - 0.014 14.9 10.9 0.014 14.8 10.9 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 GOLGA2L5 PF15070.6 ORF29869 - 0.015 14.0 7.3 0.016 13.9 7.3 1.1 1 0 0 1 1 1 0 Putative golgin subfamily A member 2-like protein 5 FlaC_arch PF05377.11 ORF29869 - 0.018 15.4 8.9 0.23 11.9 0.8 2.9 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) PKcGMP_CC PF16808.5 ORF29869 - 0.02 14.7 10.5 0.06 13.2 0.3 3.2 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase APG6_N PF17675.1 ORF29869 - 0.022 15.3 12.1 0.025 15.1 12.1 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region UPF0158 PF03682.13 ORF29869 - 0.023 14.7 2.9 0.026 14.5 2.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) Cut12 PF11500.8 ORF29869 - 0.026 14.5 3.1 0.026 14.5 3.1 2.0 1 1 1 2 2 2 0 Spindle pole body formation-associated protein Jnk-SapK_ap_N PF09744.9 ORF29869 - 0.026 14.8 10.4 0.03 14.5 10.4 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Lebercilin PF15619.6 ORF29869 - 0.027 14.1 10.8 0.042 13.5 10.8 1.3 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease Snapin_Pallidin PF14712.6 ORF29869 - 0.028 14.9 9.3 0.14 12.6 9.3 1.9 1 1 0 1 1 1 0 Snapin/Pallidin SHE3 PF17078.5 ORF29869 - 0.028 14.2 11.6 0.067 12.9 11.6 1.6 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 DUF948 PF06103.11 ORF29869 - 0.031 14.5 3.4 0.13 12.5 3.4 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) ABC_tran_CTD PF16326.5 ORF29869 - 0.031 14.5 8.4 2.4 8.4 8.4 2.2 1 1 0 1 1 1 0 ABC transporter C-terminal domain Uso1_p115_C PF04871.13 ORF29869 - 0.032 14.6 9.3 0.037 14.4 9.3 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Fez1 PF06818.15 ORF29869 - 0.038 14.5 8.9 0.04 14.4 8.9 1.1 1 0 0 1 1 1 0 Fez1 Atg14 PF10186.9 ORF29869 - 0.039 13.0 8.1 0.04 13.0 8.1 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PRKG1_interact PF15898.5 ORF29869 - 0.04 14.8 9.1 0.048 14.6 9.1 1.0 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain ZapB PF06005.12 ORF29869 - 0.04 14.3 12.0 0.055 13.9 12.0 1.2 1 0 0 1 1 1 0 Cell division protein ZapB Taxilin PF09728.9 ORF29869 - 0.042 13.0 12.0 0.048 12.8 12.0 1.0 1 0 0 1 1 1 0 Myosin-like coiled-coil protein Phage_GP20 PF06810.11 ORF29869 - 0.046 13.5 8.8 0.067 13.0 8.8 1.3 1 0 0 1 1 1 0 Phage minor structural protein GP20 HemX PF04375.14 ORF29869 - 0.048 12.9 8.0 0.054 12.8 8.0 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase BRI3BP PF14965.6 ORF29869 - 0.051 13.1 4.2 1.9 8.0 0.5 2.0 1 1 1 2 2 2 0 Negative regulator of p53/TP53 OmpH PF03938.14 ORF29869 - 0.051 13.9 12.5 0.082 13.3 12.5 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Exonuc_VII_L PF02601.15 ORF29869 - 0.056 13.0 7.9 0.057 13.0 7.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF5082 PF16888.5 ORF29869 - 0.062 13.6 7.6 0.69 10.2 7.6 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) DUF489 PF04356.12 ORF29869 - 0.067 13.2 4.2 0.11 12.5 2.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF489) DUF2730 PF10805.8 ORF29869 - 0.071 13.2 4.6 0.16 12.1 4.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2730) DUF241 PF03087.14 ORF29869 - 0.075 12.9 5.9 0.076 12.8 1.3 2.0 1 1 1 2 2 2 0 Arabidopsis protein of unknown function BLOC1_2 PF10046.9 ORF29869 - 0.076 13.3 8.9 0.47 10.8 3.3 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Allexi_40kDa PF05549.11 ORF29869 - 0.078 12.5 3.5 0.083 12.4 3.5 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein Spc7 PF08317.11 ORF29869 - 0.091 11.6 10.2 0.098 11.5 10.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF29869 - 0.094 12.8 3.6 0.11 12.5 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Fungal_TACC PF12709.7 ORF29869 - 0.11 13.0 7.5 1.1 9.8 7.4 2.1 1 1 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins CorA PF01544.18 ORF29869 - 0.11 11.8 4.0 0.13 11.6 4.0 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein SlyX PF04102.12 ORF29869 - 0.11 13.1 7.0 0.16 12.6 4.4 1.9 1 1 1 2 2 2 0 SlyX Muted PF14942.6 ORF29869 - 0.12 12.7 9.1 0.13 12.6 9.1 1.1 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Fib_alpha PF08702.10 ORF29869 - 0.12 12.5 7.9 0.24 11.6 7.9 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2120 PF09893.9 ORF29869 - 0.13 12.3 4.7 0.25 11.5 4.7 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) CC2-LZ PF16516.5 ORF29869 - 0.13 12.6 9.5 0.15 12.4 4.4 2.0 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Prefoldin_2 PF01920.20 ORF29869 - 0.14 12.2 12.3 0.12 12.4 4.3 2.1 1 1 1 2 2 2 0 Prefoldin subunit NPV_P10 PF05531.12 ORF29869 - 0.16 12.5 4.4 1.5 9.4 4.4 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF641 PF04859.12 ORF29869 - 0.19 12.1 7.8 0.89 9.9 3.2 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF724 PF05266.14 ORF29869 - 0.19 11.5 8.5 0.68 9.7 8.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Spectrin PF00435.21 ORF29869 - 0.2 12.2 7.9 0.42 11.1 7.9 1.6 1 1 0 1 1 1 0 Spectrin repeat Med4 PF10018.9 ORF29869 - 0.2 11.3 7.9 0.4 10.3 7.9 1.5 1 1 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 XhlA PF10779.9 ORF29869 - 0.21 11.8 10.1 0.36 11.1 3.5 2.1 1 1 1 2 2 2 0 Haemolysin XhlA CENP-Q PF13094.6 ORF29869 - 0.24 11.6 10.2 0.28 11.4 10.2 1.1 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Uds1 PF15456.6 ORF29869 - 0.26 11.4 6.8 0.25 11.5 2.3 2.0 1 1 1 2 2 2 0 Up-regulated During Septation DivIC PF04977.15 ORF29869 - 0.27 11.0 13.6 0.9 9.4 6.4 2.6 1 1 2 3 3 3 0 Septum formation initiator bZIP_1 PF00170.21 ORF29869 - 0.29 11.2 10.5 2.8 8.1 4.5 2.4 1 1 1 2 2 2 0 bZIP transcription factor Lectin_N PF03954.14 ORF29869 - 0.3 10.8 4.7 1.3 8.8 0.8 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain HR1 PF02185.16 ORF29869 - 0.32 11.1 9.4 2.3 8.4 0.9 2.7 1 1 1 2 2 2 0 Hr1 repeat Tweety PF04906.13 ORF29869 - 0.33 9.6 1.6 0.37 9.4 1.6 1.1 1 0 0 1 1 1 0 Tweety GBP_C PF02841.14 ORF29869 - 0.33 10.3 9.8 0.37 10.1 9.8 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF812 PF05667.11 ORF29869 - 0.34 9.7 10.5 0.39 9.5 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) V_ATPase_I PF01496.19 ORF29869 - 0.34 8.8 7.2 0.34 8.8 7.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Glutaredoxin2_C PF04399.13 ORF29869 - 0.38 10.6 4.0 0.23 11.3 1.6 1.7 1 1 1 2 2 2 0 Glutaredoxin 2, C terminal domain Spc24 PF08286.11 ORF29869 - 0.41 10.9 10.6 6.5 7.0 10.6 2.0 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DMPK_coil PF08826.10 ORF29869 - 0.42 10.8 10.4 1.8 8.7 2.2 2.2 1 1 1 2 2 2 0 DMPK coiled coil domain like FlxA PF14282.6 ORF29869 - 0.42 10.6 7.8 0.84 9.7 3.3 2.0 1 1 1 2 2 2 0 FlxA-like protein ORF6C PF10552.9 ORF29869 - 0.42 10.7 8.4 0.32 11.1 2.6 2.2 1 1 1 2 2 2 0 ORF6C domain DUF3810 PF12725.7 ORF29869 - 0.43 9.9 2.9 0.47 9.7 2.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF3552 PF12072.8 ORF29869 - 0.44 9.9 13.7 0.087 12.2 5.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) CENP-H PF05837.12 ORF29869 - 0.55 10.7 8.3 0.69 10.3 8.3 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Fzo_mitofusin PF04799.13 ORF29869 - 0.56 9.7 4.6 0.79 9.2 4.6 1.3 1 0 0 1 1 1 0 fzo-like conserved region DUF4140 PF13600.6 ORF29869 - 0.64 10.5 7.2 1.2 9.6 3.6 2.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) TMPIT PF07851.13 ORF29869 - 0.7 9.1 6.2 0.79 8.9 6.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF3847 PF12958.7 ORF29869 - 0.71 10.0 9.9 1.1 9.4 1.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3847) FapA PF03961.13 ORF29869 - 0.72 8.4 9.4 0.74 8.4 9.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Ax_dynein_light PF10211.9 ORF29869 - 0.75 9.7 10.5 1.5 8.7 10.5 1.6 1 1 0 1 1 1 0 Axonemal dynein light chain Med9 PF07544.13 ORF29869 - 0.76 9.9 7.8 4.4 7.5 7.8 2.0 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 DUF3450 PF11932.8 ORF29869 - 0.8 9.0 8.6 1.3 8.2 8.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) YabA PF06156.13 ORF29869 - 0.8 10.4 8.7 1.1 10.0 8.7 1.3 1 1 0 1 1 1 0 Initiation control protein YabA EMP24_GP25L PF01105.24 ORF29869 - 0.89 9.5 6.6 1.3 8.9 6.3 1.5 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Tho2 PF11262.8 ORF29869 - 0.91 8.7 6.9 1.2 8.2 6.9 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 PhoU PF01895.19 ORF29869 - 0.92 10.0 5.5 0.78 10.2 1.9 2.0 1 1 1 2 2 2 0 PhoU domain Swi5 PF07061.11 ORF29869 - 1 9.5 7.6 31 4.7 7.6 2.1 1 1 0 1 1 1 0 Swi5 GrpE PF01025.19 ORF29869 - 1.1 8.9 10.7 3.1 7.4 10.7 1.7 1 1 0 1 1 1 0 GrpE BST2 PF16716.5 ORF29869 - 1.1 9.8 10.6 5.6 7.6 4.7 2.5 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF4446 PF14584.6 ORF29869 - 1.5 8.8 7.6 1.3 9.0 3.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF1845 PF08900.11 ORF29869 - 1.5 8.5 5.0 2.5 7.8 0.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1845) Hemagglutinin PF00509.18 ORF29869 - 2.6 6.3 6.7 8.2 4.7 4.1 1.8 1 1 1 2 2 2 0 Haemagglutinin DUF1640 PF07798.11 ORF29869 - 2.9 7.9 10.5 3 7.9 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DUF5595 PF18077.1 ORF29869 - 3 8.0 9.5 7.5 6.7 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5595) Synaptobrevin PF00957.21 ORF29869 - 6.5 6.6 7.4 5.4 6.9 1.6 2.1 1 1 1 2 2 2 0 Synaptobrevin Peptidase_S78 PF04586.17 ORF29859 - 0.064 13.4 0.0 1.6 8.9 0.0 2.0 2 0 0 2 2 2 0 Caudovirus prohead serine protease DNAPolymera_Pol PF11590.8 ORF29730 - 0.033 14.1 0.9 0.22 11.4 0.2 2.2 2 0 0 2 2 2 0 DNA polymerase catalytic subunit Pol ubiquitin PF00240.23 ORF29450 - 7.8e-16 57.6 0.0 8.7e-16 57.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF29450 - 1.5e-09 37.5 0.0 1.8e-09 37.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF29450 - 1.7e-05 25.1 0.0 0.00013 22.4 0.0 1.9 1 1 0 1 1 1 1 Ubiquitin-like domain DUF3422 PF11902.8 ORF29450 - 0.17 11.0 0.0 0.17 11.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3422) RRXRR PF14239.6 ORF29152 - 0.1 12.4 9.9 0.11 12.4 9.9 1.2 1 0 0 1 1 1 0 RRXRR protein Circo_capsid PF02443.15 ORF29152 - 0.16 11.6 7.9 0.16 11.6 7.9 1.2 1 0 0 1 1 1 0 Circovirus capsid protein Peptidase_A21 PF03566.13 ORF29152 - 0.19 10.0 1.1 0.18 10.1 1.1 1.1 1 0 0 1 1 1 0 Peptidase family A21 MCU PF04678.13 ORF28885 - 0.021 15.0 0.0 0.029 14.5 0.0 1.3 1 1 0 1 1 1 0 Mitochondrial calcium uniporter DUF2528 PF10800.8 ORF28304 - 0.041 14.5 0.2 0.048 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2528) Adeno_PV PF03910.13 ORF2759 - 1.6 7.3 7.3 1.8 7.2 7.3 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV LcrG PF07216.12 ORF27516 - 0.11 12.5 0.9 0.15 12.0 0.9 1.3 1 0 0 1 1 1 0 LcrG protein Nup54 PF13874.6 ORF27442 - 0.0011 19.0 2.3 0.0012 19.0 2.3 1.1 1 0 0 1 1 1 1 Nucleoporin complex subunit 54 Taxilin PF09728.9 ORF27442 - 0.0018 17.5 6.6 0.0021 17.3 6.6 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein BRE1 PF08647.11 ORF27442 - 0.0019 18.2 9.6 0.0022 18.0 9.6 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase DUF5082 PF16888.5 ORF27442 - 0.0021 18.3 7.8 0.0025 18.1 7.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) DUF3450 PF11932.8 ORF27442 - 0.0023 17.3 4.8 0.0026 17.1 4.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) FOXP-CC PF16159.5 ORF27442 - 0.0033 18.0 1.0 0.0043 17.6 1.0 1.2 1 0 0 1 1 1 1 FOXP coiled-coil domain UPF0449 PF15136.6 ORF27442 - 0.0097 16.4 3.9 0.012 16.0 3.9 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0449 HemX PF04375.14 ORF27442 - 0.013 14.8 4.5 0.014 14.7 4.5 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase CENP-F_leu_zip PF10473.9 ORF27442 - 0.015 15.3 8.4 0.017 15.2 8.4 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Phage_Mu_Gam PF07352.12 ORF27442 - 0.025 14.5 7.0 0.036 14.0 7.0 1.3 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein Laminin_II PF06009.12 ORF27442 - 0.027 14.5 5.1 0.033 14.2 5.1 1.0 1 0 0 1 1 1 0 Laminin Domain II Spectrin PF00435.21 ORF27442 - 0.033 14.7 5.8 0.04 14.4 5.8 1.1 1 0 0 1 1 1 0 Spectrin repeat tRNA-synt_1b PF00579.25 ORF27442 - 0.045 13.1 3.9 0.048 13.0 3.9 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) CENP-H PF05837.12 ORF27442 - 0.07 13.5 5.5 0.083 13.3 5.5 1.3 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF2120 PF09893.9 ORF27442 - 0.13 12.4 4.3 0.14 12.2 4.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) DUF1664 PF07889.12 ORF27442 - 0.19 11.8 3.7 0.22 11.5 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) TMPIT PF07851.13 ORF27442 - 0.4 9.9 4.9 0.44 9.7 4.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein DivIC PF04977.15 ORF27442 - 1.3 8.8 10.0 0.78 9.5 5.5 2.0 1 1 1 2 2 2 0 Septum formation initiator Spc24 PF08286.11 ORF27442 - 1.7 8.9 9.3 7 6.9 3.1 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 TMPIT PF07851.13 ORF26899 - 0.02 14.1 0.1 0.024 13.9 0.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF3950 PF13132.6 ORF26899 - 0.16 11.8 0.7 0.25 11.1 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) Aldo_ket_red PF00248.21 ORF26539 - 1.5e-09 37.5 0.0 1.7e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family DUF681 PF05080.12 ORF24778 - 0.0048 17.5 0.5 0.0056 17.3 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF681) IDO PF01231.18 ORF24778 - 0.099 11.4 0.1 0.1 11.4 0.1 1.1 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase Collagen PF01391.18 ORF24447 - 0.00084 19.1 9.1 0.0013 18.5 9.1 1.3 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) Zip PF02535.22 ORF24281 - 4.6e-10 39.2 0.7 5e-10 39.1 0.7 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter DUF5058 PF16481.5 ORF24281 - 0.008 15.9 0.2 0.0089 15.7 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5058) DUF3297 PF11730.8 ORF23334 - 0.01 15.7 1.7 0.012 15.4 1.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3297) mRNA_cap_enzyme PF01331.19 ORF23334 - 0.37 10.6 10.3 0.37 10.6 10.3 1.0 1 0 0 1 1 1 0 mRNA capping enzyme, catalytic domain Dmrt1 PF12374.8 ORF23135 - 3.6 8.1 9.8 0.49 10.9 3.3 2.0 1 1 1 2 2 2 0 Double-sex mab3 related transcription factor 1 APG12 PF04110.13 ORF21831 - 0.041 14.3 0.1 0.2 12.1 0.1 1.8 1 1 1 2 2 2 0 Ubiquitin-like autophagy protein Apg12 zf-TAZ PF02135.16 ORF21793 - 0.016 15.6 3.3 0.028 14.9 3.3 1.4 1 0 0 1 1 1 0 TAZ zinc finger Tap-RNA_bind PF09162.10 ORF21011 - 0.087 12.7 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Tap, RNA-binding v110 PF01639.17 ORF20925 - 0.095 12.6 2.8 0.11 12.4 2.8 1.1 1 0 0 1 1 1 0 Viral family 110 Neur_chan_memb PF02932.16 ORF20925 - 0.24 11.4 3.4 0.29 11.2 3.4 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region LMP PF04778.12 ORF20484 - 0.023 14.6 1.4 0.027 14.4 1.4 1.1 1 0 0 1 1 1 0 LMP repeated region DDA1 PF10172.9 ORF20484 - 0.056 13.7 0.4 0.086 13.1 0.4 1.5 1 1 0 1 1 1 0 Det1 complexing ubiquitin ligase S1 PF00575.23 ORF19791 - 0.0039 17.5 0.1 0.0047 17.3 0.1 1.2 1 0 0 1 1 1 1 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF19791 - 0.026 14.5 0.1 0.04 13.8 0.1 1.3 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain Myb_DNA-binding PF00249.31 ORF19614 - 0.025 14.8 0.1 0.04 14.1 0.1 1.4 1 0 0 1 1 1 0 Myb-like DNA-binding domain MGC-24 PF05283.11 ORF19457 - 0.6 10.6 3.4 0.75 10.2 3.4 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin ADP_PFK_GK PF04587.15 ORF19408 - 0.27 9.8 1.6 0.29 9.6 1.6 1.0 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region Acetate_kinase PF00871.17 ORF19323 - 0.14 10.8 4.3 0.15 10.7 4.3 1.0 1 0 0 1 1 1 0 Acetokinase family CCB1 PF12046.8 ORF19323 - 1 8.7 3.0 1.4 8.2 3.0 1.4 1 1 0 1 1 1 0 Cofactor assembly of complex C subunit B Anthrax-tox_M PF09156.10 ORF18551 - 0.15 11.3 0.0 0.18 11.1 0.0 1.0 1 0 0 1 1 1 0 Anthrax toxin lethal factor, middle domain DUF4705 PF15788.5 ORF17501 - 0.017 15.4 4.6 0.017 15.4 4.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4705) Gemini_AC4_5 PF04807.12 ORF16304 - 2.1 8.1 4.3 1.8 8.3 0.1 2.3 2 0 0 2 2 2 0 Geminivirus AC4/5 conserved region DUF2528 PF10800.8 ORF15257 - 0.041 14.5 0.2 0.048 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2528) TPR_2 PF07719.17 ORF14924 - 3.9e-05 23.4 0.1 0.28 11.4 0.0 2.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF14924 - 8.2e-05 22.3 0.1 0.36 10.7 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF14924 - 0.02 15.4 0.0 0.03 14.8 0.0 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF14924 - 0.026 14.7 0.1 14 6.2 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF14924 - 0.063 13.9 0.0 0.27 12.0 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat Spec3 PF15795.5 ORF14791 - 0.00019 21.9 16.2 0.017 15.6 16.2 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein MAGI_u1 PF16663.5 ORF14265 - 0.061 13.4 0.7 0.088 12.9 0.7 1.3 1 0 0 1 1 1 0 Unstructured region on MAGI 7TM_GPCR_Sru PF10322.9 ORF13854 - 0.054 12.8 0.4 0.059 12.7 0.4 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru IFT20 PF14931.6 ORF1355 - 0.078 13.2 1.3 0.21 11.7 1.3 1.8 1 1 0 1 1 1 0 Intraflagellar transport complex B, subunit 20 EGF_2 PF07974.13 ORF13049 - 0.13 12.6 7.3 0.47 10.9 7.4 1.8 1 1 1 2 2 2 0 EGF-like domain tRNA-synt_1e PF01406.19 ORF12863 - 0.03 13.7 0.2 0.032 13.6 0.2 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain PapC_N PF13954.6 ORF12863 - 0.031 14.3 0.0 0.034 14.1 0.0 1.1 1 0 0 1 1 1 0 PapC N-terminal domain Ly49 PF08391.10 ORF12755 - 1.3 9.4 4.6 1.5 9.2 4.6 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region SLATT_1 PF18181.1 ORF12722 - 0.24 11.4 0.2 0.27 11.2 0.2 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 DUF543 PF04418.12 ORF12221 - 0.067 13.2 0.2 0.1 12.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF543) Ribosomal_S27e PF01667.17 ORF112292 - 1.7e-24 85.3 2.1 2e-24 85.0 2.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 ORF112292 - 0.0025 17.3 1.1 0.0025 17.3 1.1 1.5 2 0 0 2 2 2 1 TFIIB zinc-binding zf-ACC PF17848.1 ORF112292 - 0.0029 17.6 3.1 0.71 10.0 0.4 2.2 2 0 0 2 2 2 2 Acetyl-coA carboxylase zinc finger domain DUF1116 PF06545.11 ORF112292 - 0.0079 15.7 0.0 0.0092 15.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1116) zf-ribbon_3 PF13248.6 ORF112292 - 0.0084 15.5 1.1 1.2 8.6 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.6 ORF112292 - 0.018 14.9 2.4 0.54 10.2 2.4 2.3 1 1 0 1 1 1 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF112292 - 0.11 12.5 0.2 0.14 12.1 0.2 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbon domain ZZ PF00569.17 ORF112292 - 0.13 12.1 2.9 0.86 9.5 0.3 2.2 1 1 1 2 2 2 0 Zinc finger, ZZ type DUF503 PF04456.12 ORF112124 - 0.065 13.1 0.6 6.4 6.7 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF503) TALPID3 PF15324.6 ORF112034 - 0.014 13.1 0.3 0.014 13.1 0.3 1.0 1 0 0 1 1 1 0 Hedgehog signalling target DUF4252 PF14060.6 ORF112034 - 0.083 12.8 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) Adaptin_binding PF10199.9 ORF112034 - 0.12 12.9 1.5 0.17 12.5 1.5 1.3 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Tap-RNA_bind PF09162.10 ORF112022 - 0.087 12.7 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Tap, RNA-binding PilN PF05137.13 ORF111982 - 0.039 14.1 0.1 0.049 13.8 0.1 1.1 1 0 0 1 1 1 0 Fimbrial assembly protein (PilN) AA_permease_N PF08403.10 ORF111982 - 0.12 11.9 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Amino acid permease N-terminal Ribosomal_S21e PF01249.18 ORF111979 - 2.3e-30 104.5 0.1 2.5e-30 104.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S21e Zn-ribbon_8 PF09723.10 ORF111934 - 9.6e-05 22.4 0.5 0.59 10.3 0.2 2.5 2 1 0 2 2 2 2 Zinc ribbon domain zf-ribbon_3 PF13248.6 ORF111934 - 0.00048 19.4 2.6 0.23 10.9 0.1 2.4 2 0 0 2 2 2 2 zinc-ribbon domain zf-C4_Topoisom PF01396.19 ORF111934 - 0.0011 18.7 3.5 0.034 13.9 0.4 2.3 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger DUF1272 PF06906.11 ORF111934 - 0.0089 16.1 1.3 0.36 10.9 1.6 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF1272) Ribosomal_S27e PF01667.17 ORF111934 - 0.0091 15.7 0.3 0.44 10.3 0.0 2.1 2 0 0 2 2 2 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 ORF111934 - 0.013 14.9 1.9 1.7 8.2 0.2 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding Zn_Tnp_IS1 PF03811.13 ORF111934 - 0.022 14.5 0.1 0.25 11.1 0.0 2.2 2 0 0 2 2 2 0 InsA N-terminal domain Zn_Tnp_IS1595 PF12760.7 ORF111934 - 0.033 14.2 1.3 4.6 7.3 0.3 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-ACC PF17848.1 ORF111934 - 0.04 14.0 3.4 3.3 7.9 0.2 2.5 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Mu-like_Com PF10122.9 ORF111934 - 0.1 12.1 1.5 6.3 6.3 0.2 2.2 2 0 0 2 2 2 0 Mu-like prophage protein Com zf-ISL3 PF14690.6 ORF111934 - 0.11 13.2 2.2 8.9 7.1 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-TFIIB PF13453.6 ORF111934 - 0.15 11.4 4.0 0.61 9.5 0.8 2.4 2 0 0 2 2 2 0 Transcription factor zinc-finger DUF3797 PF12677.7 ORF111934 - 0.34 10.8 5.4 2.1 8.3 0.8 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3797) Ogr_Delta PF04606.12 ORF111934 - 0.64 10.0 4.9 2.1 8.4 0.2 2.3 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger PhnA_Zn_Ribbon PF08274.12 ORF111934 - 0.86 9.6 5.4 4.1 7.5 0.1 2.5 3 0 0 3 3 3 0 PhnA Zinc-Ribbon DNA_ligase_ZBD PF03119.16 ORF111934 - 0.88 9.7 5.3 5.6 7.1 0.1 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Auto_anti-p27 PF06677.12 ORF111934 - 1.2 9.4 6.7 3.4 7.9 0.5 2.3 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF5421 PF17458.2 ORF111816 - 0.19 11.1 0.0 0.2 11.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5421) DUF5421 PF17458.2 ORF111814 - 0.19 11.1 0.0 0.2 11.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5421) CoA_binding_3 PF13727.6 ORF111665 - 4.5 7.3 7.1 0.48 10.4 1.9 1.8 1 1 1 2 2 2 0 CoA-binding domain Arabinose_Isome PF02610.15 ORF111136 - 0.016 14.5 0.1 0.016 14.5 0.1 1.1 1 0 0 1 1 1 0 L-arabinose isomerase CAAD PF14159.6 ORF111039 - 0.12 12.2 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase NOT2_3_5 PF04153.18 ORF110956 - 8.8e-22 77.6 9.1 9.5e-22 77.5 9.1 1.0 1 0 0 1 1 1 1 NOT2 / NOT3 / NOT5 family DUF3206 PF11472.8 ORF110951 - 0.017 15.1 0.3 0.021 14.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3206) Nucleocapsid-N PF11030.8 ORF110718 - 0.017 15.1 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Nucleocapsid protein N DUF2514 PF10721.9 ORF110525 - 0.016 15.3 2.4 0.019 15.0 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2514) Cas_NE0113 PF09623.10 ORF110525 - 0.043 13.5 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) Flg_bbr_C PF06429.13 ORF109645 - 5e-28 97.1 1.9 5.5e-28 96.9 1.9 1.0 1 0 0 1 1 1 1 Flagellar basal body rod FlgEFG protein C-terminal Acetyltransf_19 PF18015.1 ORF109645 - 0.024 14.9 0.0 0.032 14.5 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Nucleoside_tran PF01733.18 ORF109115 - 4.1e-15 56.0 0.1 4.7e-15 55.8 0.1 1.0 1 0 0 1 1 1 1 Nucleoside transporter MFS_1 PF07690.16 ORF109115 - 0.031 13.2 0.1 0.035 13.1 0.1 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily Sulf_transp PF04143.14 ORF109115 - 0.04 13.5 0.1 0.043 13.4 0.1 1.0 1 0 0 1 1 1 0 Sulphur transport SopA PF13981.6 ORF109032 - 0.14 12.6 1.3 0.16 12.4 1.3 1.1 1 0 0 1 1 1 0 SopA-like central domain DUF3449 PF11931.8 ORF108906 - 0.12 12.1 1.6 0.15 11.9 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) CS PF04969.16 ORF10861 - 5.5e-07 30.5 0.0 6.6e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 CS domain Sec1 PF00995.23 ORF108234 - 3.7e-17 62.8 0.1 3.9e-17 62.7 0.1 1.0 1 0 0 1 1 1 1 Sec1 family BROMI PF14961.6 ORF107591 - 0.023 12.1 0.1 0.023 12.1 0.1 1.0 1 0 0 1 1 1 0 Broad-minded protein Crystall_4 PF17945.1 ORF107591 - 0.072 13.6 0.0 0.096 13.1 0.0 1.2 1 0 0 1 1 1 0 Beta/Gamma crystallin NIF PF03031.18 ORF107465 - 9.3e-10 38.5 0.0 1.1e-09 38.3 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Como_LCP PF02247.16 ORF107081 - 0.12 11.0 0.0 0.13 10.8 0.0 1.0 1 0 0 1 1 1 0 Large coat protein zf-C3HC4_3 PF13920.6 ORF106966 - 4.3e-07 29.7 4.8 5.6e-07 29.3 4.8 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF106966 - 0.016 15.0 3.3 0.024 14.5 3.3 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 tRNA-synt_1g PF09334.11 ORF106966 - 0.56 8.9 2.4 0.72 8.5 2.4 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (M) DUF2990 PF11693.8 ORF106919 - 0.012 15.7 0.1 0.017 15.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) Matrilin_ccoil PF10393.9 ORF106919 - 0.022 14.6 0.0 0.029 14.2 0.0 1.2 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin zf-ANAPC11 PF12861.7 ORF106793 - 6.2e-32 109.5 15.8 6.8e-32 109.4 15.8 1.0 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 ORF106793 - 9.4e-22 77.1 22.3 1.2e-21 76.7 22.3 1.1 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF106793 - 4e-07 30.2 24.7 6.9e-06 26.3 24.7 2.2 1 1 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF106793 - 9.4e-06 25.4 10.4 9.4e-06 25.4 10.4 2.5 1 1 1 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF106793 - 0.0011 18.7 5.7 0.0011 18.7 5.7 2.9 1 1 0 2 2 2 1 RING/Ubox like zinc-binding domain zf-RING_UBOX PF13445.6 ORF106793 - 0.0035 17.3 14.3 0.022 14.8 14.7 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF106793 - 0.0043 17.2 5.8 0.0043 17.2 5.8 2.5 2 1 0 2 2 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF106793 - 0.02 14.7 13.2 0.02 14.7 13.2 2.4 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF106793 - 0.05 13.5 26.0 0.18 11.7 24.1 2.6 1 1 1 2 2 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF106793 - 0.069 13.1 25.1 1.7 8.6 25.4 2.6 1 1 1 2 2 2 0 zinc-RING finger domain Rad50_zn_hook PF04423.14 ORF106793 - 1.4 8.8 0.1 1.4 8.8 0.1 3.0 2 1 1 3 3 3 0 Rad50 zinc hook motif DUF2367 PF10164.9 ORF106116 - 0.06 13.8 0.1 0.068 13.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) SH3_2 PF07653.17 ORF104249 - 0.00011 21.8 0.0 0.00051 19.7 0.0 1.8 2 0 0 2 2 2 1 Variant SH3 domain SH3_9 PF14604.6 ORF104249 - 0.00041 20.1 0.2 0.0014 18.5 0.1 1.9 2 1 0 2 2 2 1 Variant SH3 domain ACP_syn_III_C PF08541.10 ORF104249 - 0.066 13.4 0.0 0.09 13.0 0.0 1.2 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PP-binding PF00550.25 ORF103117 - 4.9e-13 49.2 0.7 5.5e-13 49.1 0.7 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site Kazal_2 PF07648.15 ORF10311 - 0.038 14.1 0.3 0.055 13.6 0.3 1.2 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain CBM49 PF09478.10 ORF102870 - 0.017 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate binding domain CBM49 FBPase_2 PF06874.11 ORF102870 - 0.09 11.1 0.5 0.1 10.8 0.5 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase AA_permease PF00324.21 ORF10270 - 4.1e-10 38.9 2.7 4.3e-10 38.8 2.7 1.0 1 0 0 1 1 1 1 Amino acid permease CGGC PF08821.11 ORF102616 - 0.15 12.3 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 CGGC domain SR-25 PF10500.9 ORF102471 - 0.038 13.6 3.3 0.046 13.3 3.3 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein PROCT PF08084.11 ORF10173 - 7.7e-30 103.4 0.2 8.2e-30 103.3 0.2 1.0 1 0 0 1 1 1 1 PROCT (NUC072) domain SecY PF00344.20 ORF101693 - 2.9e-13 49.8 0.6 3.1e-13 49.7 0.6 1.0 1 0 0 1 1 1 1 SecY translocase RseC_MucC PF04246.12 ORF101693 - 0.15 12.0 0.2 0.14 12.1 0.2 1.0 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC ARTD15_N PF18084.1 ORF100852 - 0.1 12.9 0.1 0.17 12.1 0.1 1.3 1 0 0 1 1 1 0 ARTD15 N-terminal domain Rota_NSP4 PF01452.16 NODE_66344_length_241_cov_1.019417_g58403_i0forward_frame_1 - 0.084 12.5 0.3 0.1 12.3 0.3 1.1 1 0 0 1 1 1 0 Rotavirus non structural protein RdRP PF05183.12 NODE_66339_length_241_cov_1.063107_g58398_i0reverse_frame_1 - 1.2e-07 30.9 0.0 1.2e-07 30.8 0.0 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase Aa_trans PF01490.18 NODE_66337_length_241_cov_1.140777_g58396_i0reverse_frame_1 - 4.6e-05 22.3 0.4 4.8e-05 22.2 0.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DLP_helical PF18709.1 NODE_66322_length_241_cov_1.325243_g58381_i0forward_frame_1 - 0.014 14.6 0.3 0.071 12.3 0.1 1.8 1 1 0 1 1 1 0 Dynamin-like helical domain Pox_polyA_pol_N PF12630.7 NODE_66322_length_241_cov_1.325243_g58381_i0forward_frame_1 - 0.097 13.0 0.9 0.19 12.1 0.9 1.6 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain Branch PF02485.21 NODE_66320_length_241_cov_1.344660_g58379_i0reverse_frame_1 - 0.059 12.9 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 Core-2/I-Branching enzyme DUF2710 PF10921.8 NODE_66320_length_241_cov_1.344660_g58379_i0reverse_frame_1 - 0.063 13.7 0.0 0.065 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2710) IZUMO PF15005.6 NODE_66312_length_241_cov_1.388350_g58371_i0reverse_frame_1 - 0.013 16.0 0.8 0.015 15.8 0.8 1.0 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated SRP54 PF00448.22 NODE_66312_length_241_cov_1.388350_g58371_i0reverse_frame_1 - 0.024 14.3 0.2 0.025 14.2 0.2 1.0 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Pox_EPC_I2-L1 PF12575.8 NODE_66312_length_241_cov_1.388350_g58371_i0reverse_frame_1 - 0.076 13.2 2.9 0.26 11.5 0.7 2.1 1 1 1 2 2 2 0 Poxvirus entry protein complex L1 and I2 mCpol PF18182.1 NODE_66312_length_241_cov_1.388350_g58371_i0reverse_frame_1 - 0.16 12.3 2.2 0.89 9.9 0.2 1.9 1 1 1 2 2 2 0 minimal CRISPR polymerase domain Med19 PF10278.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_1 - 0.68 9.8 10.3 0.76 9.7 10.3 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Rrn6 PF10214.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_1 - 3.6 6.0 8.5 3.7 5.9 8.5 1.2 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor SelK_SelG PF10961.8 NODE_66303_length_241_cov_1.446602_g58362_i0forward_frame_1 - 1.7 9.3 4.5 2 9.1 4.5 1.3 1 0 0 1 1 1 0 Selenoprotein SelK_SelG DUF390 PF04094.14 NODE_66303_length_241_cov_1.446602_g58362_i0forward_frame_1 - 4.6 5.4 5.8 5.2 5.2 5.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) 5_nucleotid_C PF02872.18 NODE_66299_length_241_cov_1.480583_g58358_i0reverse_frame_1 - 5.7e-13 49.4 0.0 5.7e-13 49.4 0.0 1.0 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain BatA PF07584.11 NODE_66293_length_241_cov_1.529126_g58352_i0reverse_frame_1 - 0.1 13.0 1.9 0.11 12.9 0.1 1.8 2 0 0 2 2 2 0 Aerotolerance regulator N-terminal UreE_N PF02814.15 NODE_66283_length_241_cov_1.611650_g58342_i0forward_frame_1 - 0.055 13.1 1.0 0.081 12.5 1.0 1.2 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain PCP_red PF08369.10 NODE_66275_length_241_cov_1.723301_g58334_i0reverse_frame_1 - 0.076 13.2 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Proto-chlorophyllide reductase 57 kD subunit LytB_WW PF18342.1 NODE_66275_length_241_cov_1.723301_g58334_i0forward_frame_1 - 0.09 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Endo-beta-N-acetylglucosaminidase LytB WW domain TINF2_N PF14973.6 NODE_66272_length_241_cov_1.747573_g58331_i0reverse_frame_1 - 0.066 13.6 0.1 0.1 12.9 0.1 1.4 1 1 0 1 1 1 0 TERF1-interacting nuclear factor 2 N-terminus DnaJ PF00226.31 NODE_66267_length_241_cov_1.810680_g58326_i0reverse_frame_1 - 1.4e-07 31.5 0.2 2.1e-07 31.0 0.2 1.3 1 0 0 1 1 1 1 DnaJ domain Med6 PF04934.14 NODE_66266_length_241_cov_1.810680_g58325_i0reverse_frame_1 - 0.04 13.7 1.0 0.25 11.1 0.2 1.9 1 1 1 2 2 2 0 MED6 mediator sub complex component DUF3137 PF11335.8 NODE_66266_length_241_cov_1.810680_g58325_i0reverse_frame_1 - 0.055 13.4 0.2 0.071 13.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3137) BatD PF13584.6 NODE_66262_length_241_cov_1.868932_g58321_i0forward_frame_1 - 0.11 11.3 0.2 0.11 11.3 0.2 1.0 1 0 0 1 1 1 0 Oxygen tolerance ABC_tran PF00005.27 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 3e-09 37.5 0.2 3.3e-09 37.4 0.2 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 8.3e-05 22.3 0.4 9.4e-05 22.1 0.4 1.3 1 1 0 1 1 1 1 P-loop containing region of AAA domain Dynamin_N PF00350.23 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.00029 21.0 0.1 0.00034 20.7 0.1 1.1 1 0 0 1 1 1 1 Dynamin family AAA_23 PF13476.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.00035 21.1 0.4 0.00035 21.1 0.4 1.1 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.00052 19.5 0.1 0.00052 19.5 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF87 PF01935.17 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0012 19.0 0.1 0.0012 19.0 0.1 1.1 1 0 0 1 1 1 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0013 18.2 0.0 0.0015 18.0 0.0 1.1 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_15 PF13175.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0016 18.3 0.7 0.0017 18.1 0.7 1.1 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0017 18.3 0.1 0.0018 18.2 0.1 1.1 1 0 0 1 1 1 1 RsgA GTPase Roc PF08477.13 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0018 18.5 0.0 0.0024 18.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0026 17.8 0.1 0.0034 17.5 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AIG1 PF04548.16 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0042 16.5 0.1 0.0054 16.1 0.1 1.1 1 0 0 1 1 1 1 AIG1 family AAA_7 PF12775.7 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0074 15.8 0.0 0.0086 15.6 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_25 PF13481.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.013 15.1 0.0 0.014 14.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.035 14.5 0.0 0.035 14.5 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.042 14.2 0.0 0.054 13.9 0.0 1.2 1 0 0 1 1 1 0 RNA helicase AAA_21 PF13304.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.047 13.5 0.2 0.048 13.5 0.2 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_10 PF12846.7 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.062 12.2 0.0 0.067 12.1 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain Pox_A32 PF04665.12 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.067 12.6 0.0 0.069 12.6 0.0 1.1 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_27 PF13514.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.075 12.6 0.0 0.083 12.5 0.0 1.0 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.077 12.2 0.0 0.084 12.0 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain Ras PF00071.22 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.079 12.6 0.0 0.093 12.3 0.0 1.1 1 0 0 1 1 1 0 Ras family AAA_19 PF13245.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.11 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain SH3_2 PF07653.17 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.11 12.2 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Variant SH3 domain NACHT PF05729.12 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 NACHT domain DUF2075 PF09848.9 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.13 11.4 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.14 12.2 0.2 3.1 7.8 0.0 1.9 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit AAA_22 PF13401.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.15 12.3 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain DUF2057 PF09829.9 NODE_66242_length_241_cov_2.043689_g58301_i0reverse_frame_1 - 0.0012 19.1 0.0 0.0012 19.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2057) DUF5488 PF17590.2 NODE_66232_length_241_cov_2.276699_g58291_i0reverse_frame_1 - 0.071 12.8 0.2 0.083 12.6 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5488) zf-DBF PF07535.12 NODE_66229_length_241_cov_2.320388_g58288_i0reverse_frame_1 - 0.031 14.4 0.4 0.046 13.8 0.4 1.3 1 0 0 1 1 1 0 DBF zinc finger DUF4354 PF14263.6 NODE_66229_length_241_cov_2.320388_g58288_i0reverse_frame_1 - 0.076 12.8 0.0 0.096 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) Comm PF15957.5 NODE_66217_length_241_cov_2.548544_g58276_i0forward_frame_1 - 0.25 11.7 2.2 0.28 11.5 2.2 1.2 1 0 0 1 1 1 0 Commissureless 7TM_GPCR_Srv PF10323.9 NODE_66209_length_241_cov_2.728155_g58268_i0forward_frame_1 - 0.00067 19.1 0.9 0.0008 18.8 0.9 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srv MukB PF04310.12 NODE_66207_length_241_cov_2.742718_g58266_i0forward_frame_1 - 7e-13 48.9 0.2 8.4e-13 48.6 0.2 1.1 1 0 0 1 1 1 1 MukB N-terminal GRASP55_65 PF04495.14 NODE_66197_length_241_cov_3.111650_g58256_i0forward_frame_1 - 4.4e-09 36.8 0.0 4.8e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain PDZ_6 PF17820.1 NODE_66197_length_241_cov_3.111650_g58256_i0forward_frame_1 - 0.001 18.9 0.0 0.0013 18.5 0.0 1.2 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 NODE_66197_length_241_cov_3.111650_g58256_i0forward_frame_1 - 0.0068 16.7 0.0 0.0077 16.5 0.0 1.2 1 0 0 1 1 1 1 PDZ domain ALAD PF00490.21 NODE_66197_length_241_cov_3.111650_g58256_i0forward_frame_1 - 0.14 11.3 0.1 0.14 11.3 0.1 1.0 1 0 0 1 1 1 0 Delta-aminolevulinic acid dehydratase DUF2076 PF09849.9 NODE_66185_length_241_cov_28.631068_g58244_i0reverse_frame_1 - 0.0095 16.0 0.8 0.01 15.9 0.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) Connexin PF00029.19 NODE_66183_length_241_cov_31.567961_g58242_i0reverse_frame_1 - 0.77 9.5 2.3 0.89 9.3 2.3 1.1 1 0 0 1 1 1 0 Connexin zf-RING_11 PF17123.5 NODE_66181_length_241_cov_33.121359_g58240_i0reverse_frame_1 - 0.062 13.1 0.3 0.11 12.2 0.3 1.4 1 0 0 1 1 1 0 RING-like zinc finger CCAP PF11105.8 NODE_66176_length_241_cov_42.383495_g58235_i0forward_frame_1 - 0.053 13.5 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a FerB PF08150.12 NODE_66175_length_241_cov_47.495146_g58234_i0forward_frame_1 - 0.12 12.9 0.2 0.25 12.0 0.1 1.5 2 0 0 2 2 2 0 FerB (NUC096) domain zf-C3HC4_3 PF13920.6 NODE_66170_length_241_cov_52.747573_g58229_i0reverse_frame_1 - 0.00023 20.9 6.9 0.00032 20.5 6.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_66170_length_241_cov_52.747573_g58229_i0reverse_frame_1 - 0.01 16.1 7.3 0.016 15.5 7.3 1.3 1 0 0 1 1 1 0 Ring finger domain Prok-RING_4 PF14447.6 NODE_66170_length_241_cov_52.747573_g58229_i0reverse_frame_1 - 0.15 11.9 7.1 0.24 11.3 7.1 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 NODE_66170_length_241_cov_52.747573_g58229_i0reverse_frame_1 - 0.25 11.3 7.2 0.5 10.3 7.2 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) PsbN PF02468.15 NODE_66164_length_241_cov_63.592233_g58223_i0reverse_frame_1 - 0.27 11.1 0.8 0.4 10.6 0.8 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre N protein (psbN) NUC130_3NT PF08158.12 NODE_66158_length_241_cov_67.922330_g58217_i0forward_frame_1 - 0.042 14.2 0.0 0.084 13.2 0.0 1.5 2 0 0 2 2 2 0 NUC130/3NT domain Phe_ZIP PF08916.11 NODE_66156_length_241_cov_73.854369_g58215_i0reverse_frame_1 - 0.4 11.4 7.8 1.4 9.7 1.3 2.1 2 0 0 2 2 2 0 Phenylalanine zipper Sel_put PF04328.13 NODE_66156_length_241_cov_73.854369_g58215_i0reverse_frame_1 - 0.62 10.1 21.8 0.1 12.6 13.2 2.3 1 1 1 2 2 2 0 Selenoprotein, putative RCC1_2 PF13540.6 NODE_66156_length_241_cov_73.854369_g58215_i0forward_frame_1 - 9e-05 22.2 0.3 0.1 12.4 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Med7 PF05983.11 NODE_66152_length_241_cov_85.645631_g58211_i0forward_frame_1 - 0.081 13.0 0.3 0.11 12.5 0.3 1.2 1 0 0 1 1 1 0 MED7 protein SLATT_5 PF18160.1 NODE_66147_length_241_cov_98.116505_g58206_i0forward_frame_1 - 6.9 6.0 7.3 7.9 5.8 7.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 p12I PF12233.8 NODE_66140_length_241_cov_139.936893_g58199_i0forward_frame_1 - 0.15 12.5 1.1 0.18 12.3 1.1 1.1 1 0 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein Ery_res_leader1 PF08051.11 NODE_66135_length_241_cov_163.966019_g58194_i0forward_frame_1 - 0.12 12.4 0.1 0.25 11.5 0.1 1.5 1 0 0 1 1 1 0 Erythromycin resistance leader peptide PheRS_DBD2 PF18554.1 NODE_66128_length_241_cov_417.830097_g58187_i0reverse_frame_1 - 0.22 11.5 4.2 2.8 8.0 0.6 2.1 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Phage_H_T_join PF05521.11 NODE_66113_length_242_cov_1.014493_g58172_i0forward_frame_1 - 0.041 14.4 0.1 0.051 14.1 0.1 1.1 1 0 0 1 1 1 0 Phage head-tail joining protein DUF5560 PF17715.1 NODE_66111_length_242_cov_1.043478_g58170_i0forward_frame_1 - 0.26 10.7 8.7 0.34 10.3 8.7 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5560) TFIID_30kDa PF03540.13 NODE_66102_length_242_cov_1.154589_g58161_i0forward_frame_1 - 0.097 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID 23-30kDa subunit Zn_Tnp_IS91 PF14319.6 NODE_66097_length_242_cov_1.159420_g58156_i0reverse_frame_1 - 0.075 13.1 5.1 0.1 12.6 5.1 1.3 1 0 0 1 1 1 0 Transposase zinc-binding domain DUF4348 PF14254.6 NODE_66094_length_242_cov_1.193237_g58153_i0reverse_frame_1 - 0.0035 16.8 1.6 0.004 16.6 1.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4348) Glutaredoxin2_C PF04399.13 NODE_66094_length_242_cov_1.193237_g58153_i0reverse_frame_1 - 0.059 13.2 1.7 0.08 12.8 1.7 1.3 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain BNIP2 PF12496.8 NODE_66094_length_242_cov_1.193237_g58153_i0reverse_frame_1 - 0.073 13.5 3.0 0.074 13.5 3.0 1.1 1 0 0 1 1 1 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks296.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks296.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks296.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks296.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:12:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Endosulfine PF04667.17 NODE_66090_length_242_cov_1.299517_g58149_i0forward_frame_1 - 0.069 13.3 0.1 0.099 12.8 0.1 1.3 1 0 0 1 1 1 0 cAMP-regulated phosphoprotein/endosulfine conserved region DUF4220 PF13968.6 NODE_66085_length_242_cov_1.333333_g58144_i0forward_frame_1 - 0.084 12.3 0.4 0.12 11.8 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) Med19 PF10278.9 NODE_66079_length_242_cov_1.463768_g58138_i0forward_frame_1 - 1.5 8.7 9.3 1.9 8.4 9.3 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Pkinase PF00069.25 NODE_66077_length_242_cov_1.478261_g58136_i0reverse_frame_1 - 9.3e-21 74.4 0.0 1e-20 74.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_66077_length_242_cov_1.478261_g58136_i0reverse_frame_1 - 2.7e-10 40.0 0.0 3.1e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase HATPase_c PF02518.26 NODE_66071_length_242_cov_1.507246_g58130_i0forward_frame_1 - 4.9e-07 30.2 0.1 6e-07 30.0 0.1 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Inj_translocase PF16928.5 NODE_66069_length_242_cov_1.512077_g58128_i0forward_frame_1 - 0.036 13.5 0.0 0.04 13.4 0.0 1.0 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome TPK_catalytic PF04263.16 NODE_66069_length_242_cov_1.512077_g58128_i0forward_frame_1 - 0.097 12.7 0.2 0.15 12.2 0.1 1.3 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain Borrelia_orfD PF02999.14 NODE_66066_length_242_cov_1.536232_g58125_i0forward_frame_1 - 0.03 14.6 0.1 0.034 14.5 0.1 1.2 1 0 0 1 1 1 0 Borrelia orf-D family Sec7 PF01369.20 NODE_66059_length_242_cov_1.594203_g58118_i0reverse_frame_1 - 0.048 13.3 0.7 0.046 13.4 0.7 1.1 1 0 0 1 1 1 0 Sec7 domain DUF1673 PF07895.11 NODE_66059_length_242_cov_1.594203_g58118_i0forward_frame_1 - 0.029 14.1 2.6 0.032 14.0 2.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) PARG_cat PF05028.14 NODE_66059_length_242_cov_1.594203_g58118_i0forward_frame_1 - 0.03 13.6 0.6 0.033 13.5 0.6 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) Pkinase PF00069.25 NODE_66057_length_242_cov_1.637681_g58116_i0reverse_frame_1 - 1.6e-14 53.9 0.2 1.6e-14 53.9 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_66057_length_242_cov_1.637681_g58116_i0reverse_frame_1 - 4.1e-10 39.4 0.1 4.3e-10 39.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Tetraspanin PF00335.20 NODE_66057_length_242_cov_1.637681_g58116_i0forward_frame_1 - 0.01 15.6 2.4 0.011 15.5 2.4 1.0 1 0 0 1 1 1 0 Tetraspanin family Nod1 PF17114.5 NODE_66044_length_242_cov_1.821256_g58103_i0reverse_frame_1 - 0.076 13.2 0.4 0.1 12.7 0.3 1.3 1 1 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 Adipogenin PF15202.6 NODE_66044_length_242_cov_1.821256_g58103_i0reverse_frame_1 - 0.089 12.8 1.1 0.13 12.3 0.9 1.4 1 1 0 1 1 1 0 Adipogenin CoxIIa PF08113.11 NODE_66039_length_242_cov_1.893720_g58098_i0reverse_frame_1 - 0.09 12.6 5.3 0.24 11.2 5.3 1.8 1 1 0 1 1 1 0 Cytochrome c oxidase subunit IIa family MarR PF01047.22 NODE_66037_length_242_cov_1.922705_g58096_i0forward_frame_1 - 0.018 15.0 0.1 0.025 14.5 0.1 1.3 1 0 0 1 1 1 0 MarR family SNAD4 PF18750.1 NODE_66035_length_242_cov_2.019324_g58094_i0forward_frame_1 - 0.021 15.0 0.1 0.029 14.5 0.1 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 VGLL4 PF15245.6 NODE_66029_length_242_cov_2.120773_g58088_i0reverse_frame_1 - 0.052 13.6 1.1 0.056 13.5 1.1 1.1 1 0 0 1 1 1 0 Transcription cofactor vestigial-like protein 4 EamA PF00892.20 NODE_66029_length_242_cov_2.120773_g58088_i0forward_frame_1 - 3.3e-05 24.1 8.9 0.0084 16.3 1.5 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 NODE_66029_length_242_cov_2.120773_g58088_i0forward_frame_1 - 0.0024 17.3 2.7 0.023 14.1 2.7 1.9 1 1 0 1 1 1 1 Triose-phosphate Transporter family EmrE PF13536.6 NODE_66029_length_242_cov_2.120773_g58088_i0forward_frame_1 - 0.014 15.0 0.3 0.014 15.0 0.3 1.0 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter Sharpin_PH PF16764.5 NODE_66017_length_242_cov_2.531401_g58076_i0forward_frame_1 - 0.044 13.5 0.1 4 7.2 0.2 2.0 1 1 1 2 2 2 0 Sharpin PH domain Megourin PF17560.2 NODE_66016_length_242_cov_2.565217_g58075_i0forward_frame_1 - 0.98 9.7 7.2 2.2 8.6 5.0 2.0 1 1 1 2 2 2 0 Aphid Megourins Pkinase PF00069.25 NODE_65989_length_242_cov_14.367150_g58048_i0forward_frame_1 - 0.011 15.1 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain SR-25 PF10500.9 NODE_65986_length_242_cov_22.512077_g58045_i0forward_frame_1 - 0.0075 15.9 11.0 0.0075 15.9 11.0 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_65986_length_242_cov_22.512077_g58045_i0forward_frame_1 - 0.093 13.4 8.2 0.11 13.2 8.2 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_65985_length_242_cov_26.560386_g58044_i0forward_frame_1 - 0.27 10.8 5.5 0.27 10.8 5.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HGAL PF15666.5 NODE_65981_length_242_cov_34.685990_g58040_i0reverse_frame_1 - 0.078 13.1 0.3 0.093 12.8 0.3 1.2 1 0 0 1 1 1 0 Germinal center-associated lymphoma Phage_G PF02306.15 NODE_65978_length_242_cov_39.217391_g58037_i0forward_frame_1 - 0.052 13.3 0.0 0.057 13.1 0.0 1.2 1 0 0 1 1 1 0 Major spike protein (G protein) NTP_transf_2 PF01909.23 NODE_65973_length_242_cov_47.502415_g58032_i0forward_frame_1 - 5.5e-06 26.6 0.0 6.2e-06 26.4 0.0 1.3 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 NODE_65973_length_242_cov_47.502415_g58032_i0forward_frame_1 - 0.00034 20.6 0.4 0.0011 19.0 0.1 1.8 1 1 1 2 2 2 1 Polymerase beta, Nucleotidyltransferase PAS_6 PF08348.11 NODE_65962_length_242_cov_60.420290_g58021_i0forward_frame_1 - 0.074 12.9 0.1 0.076 12.9 0.1 1.1 1 0 0 1 1 1 0 YheO-like PAS domain DUF1138 PF06592.13 NODE_65961_length_242_cov_61.014493_g58020_i0reverse_frame_1 - 0.074 13.1 0.2 0.1 12.7 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1138) CCDC-167 PF15188.6 NODE_65955_length_242_cov_67.227053_g58014_i0reverse_frame_1 - 0.19 12.1 7.0 0.27 11.6 7.0 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Tetrabrachion PF11401.8 NODE_65951_length_242_cov_72.173913_g58010_i0forward_frame_1 - 0.036 14.1 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Tetrabrachion TRAM_LAG1_CLN8 PF03798.16 NODE_65947_length_242_cov_80.381643_g58006_i0forward_frame_1 - 0.019 14.7 0.3 0.019 14.7 0.3 1.1 1 0 0 1 1 1 0 TLC domain GBP_PSP PF02425.15 NODE_65937_length_242_cov_117.473430_g57996_i0forward_frame_1 - 0.036 13.7 2.8 0.036 13.7 2.8 2.1 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Nucleoside_tran PF01733.18 NODE_65935_length_242_cov_128.487923_g57994_i0forward_frame_1 - 8.4e-11 41.8 0.7 9.3e-11 41.7 0.7 1.0 1 0 0 1 1 1 1 Nucleoside transporter zinc_ribbon_9 PF14369.6 NODE_65927_length_242_cov_202.801932_g57986_i0forward_frame_1 - 0.1 12.9 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 zinc-ribbon LEAP-2 PF07359.11 NODE_65919_length_242_cov_365.550725_g57978_i0forward_frame_1 - 0.12 12.2 0.2 0.15 11.9 0.2 1.2 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Ribosomal_S30 PF04758.14 NODE_65918_length_242_cov_421.526570_g57977_i0forward_frame_1 - 2e-16 59.9 5.2 3.1e-16 59.3 5.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S30 Lamprin PF06403.11 NODE_65903_length_243_cov_1.091346_g57962_i0forward_frame_1 - 0.0094 15.9 3.1 0.31 11.0 0.2 2.1 1 1 1 2 2 2 2 Lamprin DUF2960 PF11173.8 NODE_65903_length_243_cov_1.091346_g57962_i0forward_frame_1 - 0.35 11.4 4.2 9.2 6.8 0.4 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2960) MarB PF13999.6 NODE_65902_length_243_cov_1.129808_g57961_i0forward_frame_1 - 0.13 12.1 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 MarB protein ERGIC_N PF13850.6 NODE_65898_length_243_cov_1.149038_g57957_i0reverse_frame_1 - 0.0099 16.2 0.2 0.011 16.0 0.2 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4083 PF13314.6 NODE_65898_length_243_cov_1.149038_g57957_i0reverse_frame_1 - 0.053 13.5 1.4 0.08 12.9 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) SSP160 PF06933.11 NODE_65895_length_243_cov_1.153846_g57954_i0reverse_frame_1 - 0.0012 17.2 0.6 0.0014 16.9 0.6 1.0 1 0 0 1 1 1 1 Special lobe-specific silk protein SSP160 zf-C3HC4_4 PF15227.6 NODE_65885_length_243_cov_1.336538_g57944_i0forward_frame_1 - 0.034 14.3 0.8 0.053 13.7 0.8 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING Phage_integrase PF00589.22 NODE_65883_length_243_cov_1.341346_g57942_i0reverse_frame_1 - 2.7e-18 66.3 2.2 2.9e-18 66.2 2.2 1.0 1 0 0 1 1 1 1 Phage integrase family DUF3763 PF12592.8 NODE_65883_length_243_cov_1.341346_g57942_i0reverse_frame_1 - 0.019 15.0 0.7 0.019 15.0 0.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3763) VF530 PF09905.9 NODE_65863_length_243_cov_1.548077_g57922_i0reverse_frame_1 - 0.027 14.7 0.2 0.04 14.1 0.2 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 Opiods_neuropep PF01160.18 NODE_65862_length_243_cov_1.557692_g57921_i0forward_frame_1 - 0.036 14.2 0.5 0.057 13.5 0.5 1.3 1 0 0 1 1 1 0 Vertebrate endogenous opioids neuropeptide Abhydrolase_8 PF06259.12 NODE_65860_length_243_cov_1.572115_g57919_i0reverse_frame_1 - 0.04 13.6 0.0 0.052 13.2 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase Myb_CC_LHEQLE PF14379.6 NODE_65860_length_243_cov_1.572115_g57919_i0reverse_frame_1 - 1.6 8.5 8.1 0.28 10.9 1.0 2.5 2 1 0 3 3 3 0 MYB-CC type transfactor, LHEQLE motif RCC1_2 PF13540.6 NODE_65847_length_243_cov_1.745192_g57906_i0reverse_frame_1 - 7.8e-07 28.7 0.1 0.029 14.2 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF809 PF05663.11 NODE_65846_length_243_cov_1.754808_g57905_i0reverse_frame_1 - 0.096 12.8 4.4 0.1 12.7 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Fur_reg_FbpA PF13076.6 NODE_65846_length_243_cov_1.754808_g57905_i0forward_frame_1 - 0.02 14.6 0.0 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 Fur-regulated basic protein A Harakiri PF15196.6 NODE_65841_length_243_cov_1.802885_g57900_i0reverse_frame_1 - 0.047 14.2 4.2 0.079 13.4 4.2 1.4 1 1 0 1 1 1 0 Activator of apoptosis harakiri T6PP_N PF18572.1 NODE_65836_length_243_cov_1.841346_g57895_i0reverse_frame_1 - 0.036 13.9 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain GNAT_C PF18164.1 NODE_65830_length_243_cov_1.918269_g57889_i0forward_frame_1 - 0.068 12.9 0.3 0.072 12.8 0.3 1.1 1 0 0 1 1 1 0 GNAT-like C-terminal domain Viral_P18 PF04521.13 NODE_65822_length_243_cov_2.014423_g57881_i0forward_frame_1 - 0.11 12.3 0.3 0.13 12.1 0.3 1.1 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein EF-hand_7 PF13499.6 NODE_65819_length_243_cov_2.024038_g57878_i0reverse_frame_1 - 0.061 13.8 0.0 0.078 13.4 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair Trans_reg_C PF00486.28 NODE_65811_length_243_cov_2.115385_g57870_i0reverse_frame_1 - 1.7e-10 40.8 0.5 2.1e-10 40.5 0.1 1.4 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal MarR_2 PF12802.7 NODE_65811_length_243_cov_2.115385_g57870_i0reverse_frame_1 - 0.05 13.5 0.2 0.12 12.2 0.1 1.7 2 0 0 2 2 2 0 MarR family cNMP_binding PF00027.29 NODE_65809_length_243_cov_2.120192_g57868_i0reverse_frame_1 - 0.0031 17.5 0.0 0.0041 17.2 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Sushi_2 PF09014.10 NODE_65808_length_243_cov_2.197115_g57867_i0forward_frame_1 - 0.1 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain DUF725 PF05267.12 NODE_65806_length_243_cov_2.230769_g57865_i0forward_frame_1 - 0.089 12.8 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF725) polyprenyl_synt PF00348.17 NODE_65805_length_243_cov_2.254808_g57864_i0forward_frame_1 - 0.027 13.5 0.0 0.03 13.4 0.0 1.0 1 0 0 1 1 1 0 Polyprenyl synthetase 2-Hacid_dh PF00389.30 NODE_65805_length_243_cov_2.254808_g57864_i0forward_frame_1 - 0.048 13.3 0.0 0.049 13.3 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FlaF PF07309.11 NODE_65804_length_243_cov_2.274038_g57863_i0reverse_frame_1 - 0.082 12.9 0.2 0.13 12.2 0.2 1.3 1 0 0 1 1 1 0 Flagellar protein FlaF TGT PF01702.18 NODE_65803_length_243_cov_2.278846_g57862_i0reverse_frame_1 - 0.065 12.4 0.5 0.076 12.2 0.5 1.0 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase DUF3675 PF12428.8 NODE_65803_length_243_cov_2.278846_g57862_i0forward_frame_1 - 0.03 14.9 3.5 0.037 14.6 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) TraP PF07296.11 NODE_65799_length_243_cov_2.572115_g57858_i0reverse_frame_1 - 0.13 11.5 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 TraP protein PFK PF00365.20 NODE_65797_length_243_cov_2.870192_g57856_i0reverse_frame_1 - 0.00027 20.4 0.0 0.00028 20.3 0.0 1.0 1 0 0 1 1 1 1 Phosphofructokinase MinC_N PF05209.13 NODE_65796_length_243_cov_2.956731_g57855_i0forward_frame_1 - 4e-07 29.9 0.0 5.9e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 Septum formation inhibitor MinC, N-terminal domain L27_2 PF09045.10 NODE_65785_length_243_cov_5.024038_g57844_i0reverse_frame_1 - 0.58 10.2 3.5 1.3 9.0 2.9 2.0 2 1 0 2 2 2 0 L27_2 EAP30 PF04157.16 NODE_65784_length_243_cov_5.245192_g57843_i0reverse_frame_1 - 1.1e-08 34.6 0.0 1.2e-08 34.6 0.0 1.0 1 0 0 1 1 1 1 EAP30/Vps36 family DegT_DnrJ_EryC1 PF01041.17 NODE_65783_length_243_cov_5.663462_g57842_i0reverse_frame_1 - 0.019 14.3 0.1 0.022 14.1 0.1 1.1 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family DHFR_2 PF06442.11 NODE_65781_length_243_cov_10.187500_g57840_i0reverse_frame_1 - 0.033 14.0 0.0 0.034 14.0 0.0 1.2 1 0 0 1 1 1 0 R67 dihydrofolate reductase TMEM247 PF15444.6 NODE_65766_length_243_cov_43.475962_g57825_i0forward_frame_1 - 5.9 6.9 6.5 22 5.0 5.0 1.9 1 1 1 2 2 2 0 Transmembrane protein 247 DUF3179 PF11376.8 NODE_65763_length_243_cov_46.865385_g57822_i0reverse_frame_1 - 0.032 13.6 0.1 0.033 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3179) V_ATPase_I PF01496.19 NODE_65761_length_243_cov_49.524038_g57820_i0forward_frame_1 - 0.0057 14.6 0.2 0.0067 14.4 0.2 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Mrr_cat PF04471.12 NODE_65755_length_243_cov_52.461538_g57814_i0reverse_frame_1 - 0.057 13.5 0.3 0.061 13.3 0.3 1.1 1 0 0 1 1 1 0 Restriction endonuclease Corona_NS3b PF03053.14 NODE_65755_length_243_cov_52.461538_g57814_i0forward_frame_1 - 0.18 11.5 2.1 0.19 11.5 2.1 1.1 1 0 0 1 1 1 0 ORF3b coronavirus protein Pkinase PF00069.25 NODE_65748_length_243_cov_58.937500_g57807_i0reverse_frame_1 - 2.9e-05 23.6 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Ank_2 PF12796.7 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 6.3e-06 26.7 0.0 8.2e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 1e-05 25.7 0.0 0.016 15.7 0.1 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 3.5e-05 24.3 0.0 5.9e-05 23.5 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 0.0013 19.1 0.0 0.15 12.7 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank_5 PF13857.6 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 0.064 13.6 0.0 0.091 13.1 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) DUF2267 PF10025.9 NODE_65746_length_243_cov_61.504808_g57805_i0reverse_frame_1 - 0.13 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) Pro_isomerase PF00160.21 NODE_65743_length_243_cov_70.110577_g57802_i0reverse_frame_1 - 0.00018 21.8 0.0 0.00025 21.4 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PIRT PF15099.6 NODE_65742_length_243_cov_70.610577_g57801_i0forward_frame_1 - 0.0092 15.6 0.2 0.011 15.4 0.2 1.2 1 0 0 1 1 1 1 Phosphoinositide-interacting protein family DUF676 PF05057.14 NODE_65734_length_243_cov_93.927885_g57793_i0forward_frame_1 - 0.069 12.6 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hit1_C PF18268.1 NODE_65733_length_243_cov_94.519231_g57792_i0reverse_frame_1 - 0.031 14.4 0.1 0.037 14.2 0.1 1.2 1 0 0 1 1 1 0 Hit1 C-terminal Tombus_P33 PF08500.10 NODE_65733_length_243_cov_94.519231_g57792_i0reverse_frame_1 - 0.14 12.2 1.1 0.25 11.3 0.2 1.8 1 1 1 2 2 2 0 Tombusvirus p33 Microvir_J PF04726.13 NODE_65730_length_243_cov_119.475962_g57789_i0reverse_frame_1 - 0.023 14.6 2.1 0.049 13.6 2.1 1.5 1 0 0 1 1 1 0 Microvirus J protein DUF452 PF04301.13 NODE_65726_length_243_cov_130.091346_g57785_i0reverse_frame_1 - 0.06 12.9 0.0 0.06 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF452) Coilin_N PF15862.5 NODE_65718_length_243_cov_191.562500_g57777_i0reverse_frame_1 - 9.1 6.1 11.5 11 5.8 11.5 1.1 1 0 0 1 1 1 0 Coilin N-terminus HydF_tetramer PF18133.1 NODE_65710_length_243_cov_421.788462_g57769_i0reverse_frame_1 - 0.17 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Hydrogen maturase F tetramerization domain zf-LITAF-like PF10601.9 NODE_65710_length_243_cov_421.788462_g57769_i0reverse_frame_1 - 0.25 11.6 9.2 9 6.6 0.0 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain DUF3482 PF11981.8 NODE_65706_length_243_cov_26859.432692_g57765_i0forward_frame_1 - 0.053 12.9 8.7 0.066 12.6 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Self-incomp_S1 PF05938.11 NODE_65705_length_243_cov_76121.629808_g57764_i0forward_frame_1 - 0.088 13.4 2.8 0.12 12.9 2.8 1.3 1 0 0 1 1 1 0 Plant self-incompatibility protein S1 SgrR_N PF12793.7 NODE_65703_length_244_cov_0.837321_g57762_i0forward_frame_2 - 0.074 13.3 0.0 0.097 12.9 0.0 1.2 1 0 0 1 1 1 0 Sugar transport-related sRNA regulator N-term Ground-like PF04155.18 NODE_65700_length_244_cov_0.942584_g57759_i0forward_frame_2 - 0.021 15.4 0.3 0.021 15.4 0.3 1.5 2 0 0 2 2 2 0 Ground-like domain NPCC PF08058.11 NODE_65699_length_244_cov_0.956938_g57758_i0reverse_frame_2 - 0.028 14.5 0.3 0.043 13.9 0.3 1.3 1 0 0 1 1 1 0 Nuclear pore complex component Rad17 PF03215.15 NODE_65696_length_244_cov_1.076555_g57755_i0reverse_frame_2 - 0.0033 17.4 0.1 0.0037 17.2 0.1 1.0 1 0 0 1 1 1 1 Rad17 P-loop domain JAMP PF05571.12 NODE_65691_length_244_cov_1.143541_g57750_i0forward_frame_2 - 0.023 14.3 3.4 0.024 14.3 3.4 1.1 1 0 0 1 1 1 0 JNK1/MAPK8-associated membrane protein Ureidogly_lyase PF04115.12 NODE_65690_length_244_cov_1.143541_g57749_i0reverse_frame_3 - 0.12 12.2 1.4 0.13 12.0 1.4 1.0 1 0 0 1 1 1 0 Ureidoglycolate lyase Statherin PF03875.13 NODE_65685_length_244_cov_1.148325_g57744_i0forward_frame_3 - 0.034 14.2 1.1 0.051 13.7 1.1 1.2 1 0 0 1 1 1 0 Statherin Shisa PF13908.6 NODE_65682_length_244_cov_1.229665_g57741_i0forward_frame_3 - 0.00098 19.4 2.0 0.0011 19.2 2.0 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Orf78 PF06024.12 NODE_65682_length_244_cov_1.229665_g57741_i0forward_frame_3 - 0.043 14.1 2.0 0.047 14.0 2.0 1.2 1 0 0 1 1 1 0 Orf78 (ac78) PRIMA1 PF16101.5 NODE_65682_length_244_cov_1.229665_g57741_i0forward_frame_3 - 0.064 13.3 6.2 0.088 12.8 6.2 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 MRI PF15325.6 NODE_65682_length_244_cov_1.229665_g57741_i0forward_frame_2 - 1.4 10.1 5.3 1.7 9.7 5.3 1.1 1 0 0 1 1 1 0 Modulator of retrovirus infection Ephrin_rec_like PF07699.13 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 8.5e-09 35.0 27.9 3.1e-05 23.7 12.9 3.1 1 1 2 3 3 3 3 Putative ephrin-receptor like NCD3G PF07562.14 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 7.4e-05 22.6 12.8 0.0022 17.9 3.8 2.7 1 1 1 2 2 2 2 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 0.00075 19.8 14.0 0.16 12.4 0.1 3.5 1 1 2 3 3 3 3 TNFR/NGFR cysteine-rich region Opy2 PF09463.10 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 0.44 10.9 14.4 0.29 11.5 3.2 3.2 2 1 2 4 4 4 0 Opy2 protein Sp38 PF07354.12 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 8.8 5.7 13.7 9.9 5.6 7.9 2.0 1 1 1 2 2 2 0 Zona-pellucida-binding protein (Sp38) zf-primase PF09329.11 NODE_65681_length_244_cov_1.258373_g57740_i0forward_frame_3 - 7.1 6.5 10.9 1 9.3 2.3 2.3 1 1 1 2 2 2 0 Primase zinc finger RCDG1 PF15725.5 NODE_65680_length_244_cov_1.296651_g57739_i0reverse_frame_3 - 0.13 12.7 0.9 0.17 12.3 0.9 1.1 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein Ras PF00071.22 NODE_65676_length_244_cov_1.330144_g57735_i0forward_frame_3 - 5.8e-26 91.0 0.3 6.2e-26 90.9 0.3 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_65676_length_244_cov_1.330144_g57735_i0forward_frame_3 - 1.1e-19 70.8 0.3 1.2e-19 70.7 0.3 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_65676_length_244_cov_1.330144_g57735_i0forward_frame_3 - 5.2e-06 26.0 0.0 6e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 NODE_65676_length_244_cov_1.330144_g57735_i0forward_frame_3 - 0.079 12.3 0.0 0.079 12.3 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region VESA1_N PF12785.7 NODE_65673_length_244_cov_1.368421_g57732_i0forward_frame_2 - 0.13 11.2 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 DUF1202 PF06717.11 NODE_65671_length_244_cov_1.411483_g57730_i0forward_frame_3 - 3.1e-45 154.9 6.3 3.3e-45 154.8 6.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1202) Creb_binding PF09030.10 NODE_65670_length_244_cov_1.416268_g57729_i0reverse_frame_2 - 0.17 12.6 0.0 0.23 12.1 0.0 1.2 1 0 0 1 1 1 0 Creb binding Ribosomal_L23eN PF03939.13 NODE_65667_length_244_cov_1.444976_g57726_i0reverse_frame_3 - 0.16 12.2 0.1 0.24 11.6 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain DUF4916 PF16262.5 NODE_65666_length_244_cov_1.478469_g57725_i0reverse_frame_3 - 0.054 13.0 0.0 0.06 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) Macscav_rec PF03523.13 NODE_65665_length_244_cov_1.488038_g57724_i0reverse_frame_3 - 0.15 12.0 0.2 0.22 11.5 0.2 1.2 1 0 0 1 1 1 0 Macrophage scavenger receptor Cation_ATPase PF13246.6 NODE_65661_length_244_cov_1.521531_g57720_i0reverse_frame_3 - 2.4e-08 33.9 0.1 3.9e-08 33.3 0.1 1.3 1 0 0 1 1 1 1 Cation transport ATPase (P-type) DUF269 PF03270.13 NODE_65661_length_244_cov_1.521531_g57720_i0reverse_frame_3 - 0.034 14.2 0.1 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function, DUF269 Pox_ser-thr_kin PF05445.11 NODE_65660_length_244_cov_1.521531_g57719_i0reverse_frame_2 - 0.032 13.2 1.1 0.037 13.0 1.1 1.0 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase DUF3262 PF11660.8 NODE_65660_length_244_cov_1.521531_g57719_i0forward_frame_3 - 0.024 15.0 0.2 0.032 14.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3262) DUF2071 PF09844.9 NODE_65655_length_244_cov_1.545455_g57714_i0reverse_frame_3 - 0.033 13.8 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (COG2071) Bacillus_PapR PF05968.11 NODE_65653_length_244_cov_1.569378_g57712_i0reverse_frame_3 - 0.063 13.2 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 Bacillus PapR protein SSI PF00720.17 NODE_65653_length_244_cov_1.569378_g57712_i0reverse_frame_2 - 0.14 12.1 1.9 0.38 10.7 1.1 1.8 1 1 1 2 2 2 0 Subtilisin inhibitor-like MARVEL PF01284.23 NODE_65652_length_244_cov_1.583732_g57711_i0forward_frame_2 - 0.019 15.0 5.1 0.022 14.8 5.1 1.1 1 0 0 1 1 1 0 Membrane-associating domain DUF3810 PF12725.7 NODE_65652_length_244_cov_1.583732_g57711_i0forward_frame_2 - 0.37 10.1 5.3 0.41 10.0 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DHHC PF01529.20 NODE_65652_length_244_cov_1.583732_g57711_i0forward_frame_2 - 1.8 8.6 7.3 2 8.5 7.3 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF2039 PF10217.9 NODE_65651_length_244_cov_1.607656_g57710_i0reverse_frame_2 - 0.0087 16.4 7.3 0.0096 16.2 7.3 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2039) zf-C4 PF00105.18 NODE_65651_length_244_cov_1.607656_g57710_i0reverse_frame_2 - 0.039 14.4 2.5 0.051 14.0 2.5 1.1 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) DHHC PF01529.20 NODE_65651_length_244_cov_1.607656_g57710_i0reverse_frame_2 - 0.063 13.4 1.1 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 DHHC palmitoyltransferase zf-C2HCIx2C PF10782.9 NODE_65651_length_244_cov_1.607656_g57710_i0reverse_frame_2 - 0.43 10.5 6.5 0.6 10.1 0.7 2.2 1 1 1 2 2 2 0 Zinc-finger TPR_10 PF13374.6 NODE_65647_length_244_cov_1.679426_g57706_i0forward_frame_3 - 0.099 12.5 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat CHASE9 PF17153.4 NODE_65644_length_244_cov_1.698565_g57703_i0reverse_frame_3 - 1e-37 128.8 0.9 1.1e-37 128.7 0.9 1.0 1 0 0 1 1 1 1 Periplasmic sensor domain, extracellular STAS PF01740.21 NODE_65644_length_244_cov_1.698565_g57703_i0reverse_frame_3 - 0.027 14.1 0.0 0.037 13.7 0.0 1.1 1 0 0 1 1 1 0 STAS domain dCache_1 PF02743.18 NODE_65644_length_244_cov_1.698565_g57703_i0reverse_frame_3 - 0.071 12.9 0.1 0.089 12.6 0.1 1.0 1 0 0 1 1 1 0 Cache domain PsbN PF02468.15 NODE_65636_length_244_cov_1.760766_g57695_i0forward_frame_2 - 0.089 12.7 3.0 2.4 8.1 0.1 2.2 1 1 1 2 2 2 0 Photosystem II reaction centre N protein (psbN) GPHH PF16905.5 NODE_65629_length_244_cov_1.846890_g57688_i0reverse_frame_3 - 5.1e-06 26.2 0.1 7.4e-06 25.6 0.1 1.2 1 0 0 1 1 1 1 Voltage-dependent L-type calcium channel, IQ-associated Glyco_hydro_67C PF07477.12 NODE_65628_length_244_cov_1.851675_g57687_i0forward_frame_3 - 0.033 13.7 0.0 0.034 13.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 C-terminus MatP_C PF17414.2 NODE_65627_length_244_cov_1.904306_g57686_i0forward_frame_3 - 0.029 14.5 0.3 0.049 13.8 0.1 1.4 2 0 0 2 2 2 0 MatP C-terminal ribbon-helix-helix domain zinc_ribbon_2 PF13240.6 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 5.8e-06 25.8 1.9 1e-05 25.1 1.9 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.0001 21.6 1.8 0.00019 20.7 1.8 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.00016 21.6 2.9 0.00027 20.9 2.9 1.4 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.0017 19.1 1.8 0.0022 18.7 1.8 1.2 1 0 0 1 1 1 1 zinc-ribbon family Nudix_N_2 PF14803.6 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.044 13.7 2.1 5.2 7.1 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal Fer4_2 PF12797.7 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.28 11.4 0.2 0.28 11.4 0.2 2.6 2 1 1 3 3 3 0 4Fe-4S binding domain NOB1_Zn_bind PF08772.11 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.54 10.5 3.5 2.8 8.2 0.1 2.2 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Ribosomal_L32p PF01783.23 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 1.5 9.1 4.7 2.2 8.6 3.4 1.9 1 1 1 2 2 2 0 Ribosomal L32p protein family Nop10p PF04135.12 NODE_65624_length_244_cov_2.023923_g57683_i0forward_frame_3 - 0.14 12.3 0.0 0.27 11.3 0.0 1.5 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family HPIH PF13323.6 NODE_65623_length_244_cov_2.028708_g57682_i0reverse_frame_2 - 0.081 12.8 0.1 0.089 12.6 0.1 1.1 1 0 0 1 1 1 0 N-terminal domain with HPIH motif DUF3007 PF11460.8 NODE_65621_length_244_cov_2.028708_g57680_i0forward_frame_2 - 0.15 12.3 0.3 0.17 12.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) Silic_transp PF03842.13 NODE_65620_length_244_cov_2.057416_g57679_i0reverse_frame_2 - 0.039 12.3 0.1 0.039 12.2 0.1 1.0 1 0 0 1 1 1 0 Silicon transporter Cytomega_UL84 PF06284.11 NODE_65615_length_244_cov_2.095694_g57674_i0forward_frame_2 - 0.03 12.8 0.4 0.034 12.6 0.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Tubulin PF00091.25 NODE_65615_length_244_cov_2.095694_g57674_i0forward_frame_2 - 0.13 12.4 0.0 0.16 12.2 0.0 1.0 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain CENP-B_dimeris PF09026.10 NODE_65613_length_244_cov_2.105263_g57672_i0forward_frame_3 - 0.16 12.4 4.8 0.18 12.2 4.8 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain zf-HYPF PF07503.12 NODE_65607_length_244_cov_2.172249_g57666_i0forward_frame_2 - 0.067 13.0 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 HypF finger DEC1 PF15859.5 NODE_65603_length_244_cov_2.205742_g57662_i0reverse_frame_3 - 0.031 14.3 0.0 0.042 13.9 0.0 1.2 1 0 0 1 1 1 0 Deleted in esophageal cancer 1 family ACT_5 PF13710.6 NODE_65600_length_244_cov_2.234450_g57659_i0reverse_frame_3 - 0.045 13.6 0.0 0.066 13.1 0.0 1.3 1 0 0 1 1 1 0 ACT domain Cupin_2 PF07883.11 NODE_65600_length_244_cov_2.234450_g57659_i0reverse_frame_2 - 1e-08 34.7 0.1 1.4e-08 34.3 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 NODE_65600_length_244_cov_2.234450_g57659_i0reverse_frame_2 - 9.7e-06 25.5 0.0 1.1e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Dak1_2 PF13684.6 NODE_65598_length_244_cov_2.267943_g57657_i0reverse_frame_2 - 0.2 10.7 0.2 0.23 10.5 0.2 1.0 1 0 0 1 1 1 0 Dihydroxyacetone kinase family Autoind_bind PF03472.15 NODE_65594_length_244_cov_2.339713_g57653_i0reverse_frame_2 - 0.09 12.3 0.7 0.11 12.0 0.7 1.2 1 0 0 1 1 1 0 Autoinducer binding domain TrbM PF07424.11 NODE_65591_length_244_cov_2.363636_g57650_i0forward_frame_2 - 0.05 13.6 0.1 0.056 13.4 0.1 1.1 1 0 0 1 1 1 0 TrbM Cys_rich_FGFR PF00839.17 NODE_65589_length_244_cov_2.425837_g57648_i0reverse_frame_3 - 0.052 13.7 0.4 0.065 13.4 0.4 1.3 1 0 0 1 1 1 0 Cysteine rich repeat GGA_N-GAT PF18308.1 NODE_65589_length_244_cov_2.425837_g57648_i0forward_frame_3 - 0.21 11.2 0.1 0.3 10.7 0.1 1.2 1 0 0 1 1 1 0 GGA N-GAT domain zf-C2H2 PF00096.26 NODE_65588_length_244_cov_2.430622_g57647_i0forward_frame_2 - 1.6e-06 28.2 4.8 0.012 16.0 0.2 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_65588_length_244_cov_2.430622_g57647_i0forward_frame_2 - 0.0039 17.9 2.9 1.7 9.7 0.1 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger Lar_restr_allev PF14354.6 NODE_65588_length_244_cov_2.430622_g57647_i0forward_frame_2 - 0.015 15.6 0.3 0.022 15.1 0.3 1.3 1 1 0 1 1 1 0 Restriction alleviation protein Lar zf-BED PF02892.15 NODE_65588_length_244_cov_2.430622_g57647_i0forward_frame_2 - 0.041 13.9 0.6 0.041 13.9 0.6 1.7 2 0 0 2 2 2 0 BED zinc finger OrsD PF12013.8 NODE_65588_length_244_cov_2.430622_g57647_i0forward_frame_2 - 0.059 13.8 1.7 0.11 13.0 0.1 1.9 2 0 0 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D Fer4_23 PF18009.1 NODE_65587_length_244_cov_2.440191_g57646_i0reverse_frame_2 - 0.026 15.0 0.0 0.035 14.5 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S iron-sulfur cluster binding domain Glyco_hydro_20 PF00728.22 NODE_65585_length_244_cov_2.488038_g57644_i0reverse_frame_2 - 4.9e-12 45.9 0.0 5.6e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain ANTH PF07651.16 NODE_65582_length_244_cov_2.540670_g57641_i0forward_frame_2 - 0.07 12.1 0.0 0.07 12.1 0.0 1.2 1 0 0 1 1 1 0 ANTH domain Lung_7-TM_R PF06814.13 NODE_65580_length_244_cov_2.559809_g57639_i0forward_frame_3 - 0.055 12.7 0.1 0.067 12.4 0.1 1.0 1 0 0 1 1 1 0 Lung seven transmembrane receptor CobU PF02283.16 NODE_65580_length_244_cov_2.559809_g57639_i0forward_frame_3 - 0.067 12.8 0.0 0.069 12.7 0.0 1.1 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase Mucin PF01456.17 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 0.29 11.1 46.6 0.38 10.7 46.6 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein NPR3 PF03666.13 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 0.3 9.8 11.9 0.32 9.7 11.9 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 MGC-24 PF05283.11 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 3.1 8.3 28.0 4.1 7.9 28.0 1.2 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin RIFIN PF02009.16 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 6.2 6.6 10.4 6.5 6.6 10.4 1.0 1 0 0 1 1 1 0 Rifin MPM1 PF17234.2 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 8.9 6.5 14.1 11 6.3 14.1 1.1 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 BRI3BP PF14965.6 NODE_65578_length_244_cov_2.598086_g57637_i0reverse_frame_3 - 0.014 14.9 3.0 0.019 14.5 3.0 1.2 1 0 0 1 1 1 0 Negative regulator of p53/TP53 Autoind_bind PF03472.15 NODE_65578_length_244_cov_2.598086_g57637_i0reverse_frame_2 - 0.12 11.8 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Autoinducer binding domain RINGv PF12906.7 NODE_65574_length_244_cov_2.636364_g57633_i0reverse_frame_2 - 0.84 9.8 5.7 0.24 11.5 1.0 2.2 2 1 0 2 2 2 0 RING-variant domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks297.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks297.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks297.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks297.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MlrC_C PF07171.12 NODE_65569_length_244_cov_2.889952_g57628_i0forward_frame_2 - 0.18 12.0 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 MlrC C-terminus DUF3460 PF11943.8 NODE_65566_length_244_cov_2.899522_g57625_i0reverse_frame_2 - 0.1 12.9 0.1 0.14 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3460) FAM184 PF15665.5 NODE_65565_length_244_cov_2.942584_g57624_i0forward_frame_3 - 0.098 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B MCM_N PF14551.6 NODE_65561_length_244_cov_3.354067_g57620_i0reverse_frame_3 - 0.009 16.6 0.5 0.011 16.3 0.5 1.2 1 0 0 1 1 1 1 MCM N-terminal domain PikAIV_N PF18605.1 NODE_65561_length_244_cov_3.354067_g57620_i0reverse_frame_3 - 0.01 15.4 0.0 0.019 14.6 0.0 1.5 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain DivIC PF04977.15 NODE_65561_length_244_cov_3.354067_g57620_i0reverse_frame_3 - 0.048 13.4 3.8 0.057 13.2 2.3 1.8 1 1 1 2 2 2 0 Septum formation initiator YlqD PF11068.8 NODE_65561_length_244_cov_3.354067_g57620_i0reverse_frame_3 - 0.12 12.8 6.8 0.17 12.3 6.8 1.4 1 1 0 1 1 1 0 YlqD protein TMPIT PF07851.13 NODE_65561_length_244_cov_3.354067_g57620_i0reverse_frame_3 - 0.35 10.1 4.8 0.36 10.0 4.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein Peripla_BP_3 PF13377.6 NODE_65558_length_244_cov_4.454545_g57617_i0forward_frame_2 - 4.8e-14 53.0 0.0 5e-14 53.0 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 NODE_65558_length_244_cov_4.454545_g57617_i0forward_frame_2 - 0.00016 21.2 0.0 0.00019 21.0 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family FR47 PF08445.10 NODE_65558_length_244_cov_4.454545_g57617_i0forward_frame_2 - 0.031 14.2 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 FR47-like protein Mon2_C PF16206.5 NODE_65555_length_244_cov_5.138756_g57614_i0forward_frame_3 - 0.012 13.8 0.6 0.014 13.6 0.6 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein PhoR PF11808.8 NODE_65554_length_244_cov_6.473684_g57613_i0forward_frame_3 - 0.0029 18.0 0.2 0.0035 17.7 0.2 1.2 1 0 0 1 1 1 1 Phosphate regulon sensor protein PhoR Wap1 PF16997.5 NODE_65551_length_244_cov_20.234450_g57610_i0reverse_frame_3 - 0.00024 20.4 2.3 0.00026 20.3 2.3 1.0 1 0 0 1 1 1 1 Wap1 domain DUF2628 PF10947.8 NODE_65550_length_244_cov_28.674641_g57609_i0reverse_frame_2 - 0.86 10.0 3.2 1.1 9.6 3.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) Trm112p PF03966.16 NODE_65550_length_244_cov_28.674641_g57609_i0forward_frame_3 - 3.2e-05 24.4 0.1 4.7e-05 23.9 0.1 1.4 1 0 0 1 1 1 1 Trm112p-like protein ADK_lid PF05191.14 NODE_65550_length_244_cov_28.674641_g57609_i0forward_frame_3 - 0.011 15.7 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 0 Adenylate kinase, active site lid Osmo_MPGsynth PF09488.10 NODE_65550_length_244_cov_28.674641_g57609_i0forward_frame_3 - 0.066 11.9 0.0 0.068 11.9 0.0 1.1 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) HTH_15 PF12324.8 NODE_65547_length_244_cov_30.598086_g57606_i0reverse_frame_2 - 0.21 11.6 0.0 0.25 11.3 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase Spore_GerQ PF09671.10 NODE_65539_length_244_cov_40.076555_g57598_i0forward_frame_3 - 0.0027 17.7 0.1 0.0047 16.9 0.1 1.5 1 0 0 1 1 1 1 Spore coat protein (Spore_GerQ) stn_TNFRSF12A PF12191.8 NODE_65534_length_244_cov_48.703349_g57593_i0reverse_frame_3 - 0.085 13.1 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain Nairovirus_M PF07948.11 NODE_65531_length_244_cov_50.641148_g57590_i0forward_frame_2 - 0.05 11.8 0.0 0.054 11.7 0.0 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like PUF PF00806.19 NODE_65527_length_244_cov_54.014354_g57586_i0reverse_frame_3 - 3.5e-05 23.2 0.0 7.6e-05 22.2 0.0 1.6 1 0 0 1 1 1 1 Pumilio-family RNA binding repeat DUF1910 PF08928.10 NODE_65527_length_244_cov_54.014354_g57586_i0reverse_frame_3 - 0.098 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1910) Peptidase_M91 PF14891.6 NODE_65527_length_244_cov_54.014354_g57586_i0reverse_frame_3 - 0.19 12.0 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 Effector protein zf-RING_11 PF17123.5 NODE_65523_length_244_cov_62.909091_g57582_i0reverse_frame_3 - 0.34 10.7 2.8 0.62 9.9 0.1 2.7 3 1 0 3 3 3 0 RING-like zinc finger DUF3219 PF11514.8 NODE_65522_length_244_cov_66.306220_g57581_i0reverse_frame_3 - 0.011 15.7 0.1 0.013 15.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3219) EGF_3 PF12947.7 NODE_65522_length_244_cov_66.306220_g57581_i0forward_frame_3 - 0.048 13.9 3.2 0.078 13.2 3.2 1.3 1 0 0 1 1 1 0 EGF domain PolyA_pol_RNAbd PF12627.7 NODE_65521_length_244_cov_66.866029_g57580_i0reverse_frame_3 - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Probable RNA and SrmB- binding site of polymerase A NOD2_WH PF17779.1 NODE_65514_length_244_cov_75.339713_g57573_i0reverse_frame_3 - 0.12 12.7 1.5 0.16 12.3 1.5 1.2 1 0 0 1 1 1 0 NOD2 winged helix domain Ion_trans PF00520.31 NODE_65509_length_244_cov_89.913876_g57568_i0reverse_frame_2 - 0.0013 18.0 0.8 0.0015 17.8 0.8 1.0 1 0 0 1 1 1 1 Ion transport protein FlxA PF14282.6 NODE_65506_length_244_cov_109.598086_g57565_i0forward_frame_2 - 0.0021 18.0 0.9 0.0028 17.6 0.9 1.1 1 0 0 1 1 1 1 FlxA-like protein DUF3381 PF11861.8 NODE_65506_length_244_cov_109.598086_g57565_i0forward_frame_2 - 0.0023 17.8 0.1 0.0023 17.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3381) HTH_Tnp_Tc3_1 PF11427.8 NODE_65506_length_244_cov_109.598086_g57565_i0forward_frame_2 - 0.12 12.3 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 Tc3 transposase UPF0239 PF06783.11 NODE_65506_length_244_cov_109.598086_g57565_i0forward_frame_2 - 0.46 10.7 4.6 0.57 10.4 4.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) DUF5558 PF17713.1 NODE_65500_length_244_cov_195.392344_g57559_i0forward_frame_2 - 0.1 13.0 0.2 0.1 13.0 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5558) Tetraspanin PF00335.20 NODE_65495_length_244_cov_277.703349_g57554_i0forward_frame_3 - 0.3 10.8 2.2 0.34 10.6 2.2 1.0 1 0 0 1 1 1 0 Tetraspanin family CorA PF01544.18 NODE_65493_length_244_cov_904.779904_g57552_i0forward_frame_3 - 0.017 14.5 0.2 0.019 14.3 0.2 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein HTH_39 PF14090.6 NODE_65487_length_245_cov_0.890476_g57546_i0reverse_frame_2 - 0.024 14.4 0.0 0.039 13.7 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain gag_pre-integrs PF13976.6 NODE_65484_length_245_cov_0.957143_g57543_i0forward_frame_3 - 0.042 13.7 0.1 0.063 13.1 0.1 1.4 1 1 0 1 1 1 0 GAG-pre-integrase domain SAM_PNT PF02198.16 NODE_65483_length_245_cov_0.990476_g57542_i0forward_frame_3 - 0.012 15.6 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 Sterile alpha motif (SAM)/Pointed domain Clp1 PF06807.14 NODE_65482_length_245_cov_1.085714_g57541_i0forward_frame_3 - 0.1 13.0 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Pre-mRNA cleavage complex II protein Clp1 Phg_2220_C PF09524.10 NODE_65480_length_245_cov_1.138095_g57539_i0forward_frame_3 - 0.17 12.0 0.0 0.26 11.4 0.0 1.2 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) GIT1_C PF12205.8 NODE_65475_length_245_cov_1.161905_g57534_i0reverse_frame_3 - 0.12 12.5 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term DUF31 PF01732.16 NODE_65475_length_245_cov_1.161905_g57534_i0forward_frame_3 - 0.18 11.3 0.0 0.2 11.1 0.0 1.0 1 0 0 1 1 1 0 Putative peptidase (DUF31) Pro-MCH PF05824.12 NODE_65474_length_245_cov_1.171429_g57533_i0reverse_frame_3 - 0.17 11.8 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 Pro-melanin-concentrating hormone (Pro-MCH) ATP-synt_C PF00137.21 NODE_65472_length_245_cov_1.219048_g57531_i0reverse_frame_2 - 0.038 14.3 3.2 0.053 13.9 3.2 1.2 1 0 0 1 1 1 0 ATP synthase subunit C PET122 PF05476.11 NODE_65471_length_245_cov_1.228571_g57530_i0reverse_frame_3 - 0.056 12.7 0.3 0.064 12.5 0.3 1.1 1 0 0 1 1 1 0 PET122 CBF PF03914.17 NODE_65471_length_245_cov_1.228571_g57530_i0reverse_frame_2 - 1.1e-12 48.3 0.0 1.4e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 CBF/Mak21 family Importin_rep_3 PF18806.1 NODE_65465_length_245_cov_1.266667_g57524_i0forward_frame_3 - 0.014 15.5 0.1 0.017 15.2 0.1 1.1 1 0 0 1 1 1 0 Importin 13 repeat DUF762 PF05555.11 NODE_65464_length_245_cov_1.271429_g57523_i0reverse_frame_2 - 0.16 11.5 0.0 0.18 11.3 0.0 1.0 1 0 0 1 1 1 0 Coxiella burnetii protein of unknown function (DUF762) CH PF00307.31 NODE_65456_length_245_cov_1.333333_g57515_i0reverse_frame_3 - 0.069 13.3 0.0 0.07 13.3 0.0 1.1 1 0 0 1 1 1 0 Calponin homology (CH) domain DUF4407 PF14362.6 NODE_65454_length_245_cov_1.342857_g57513_i0reverse_frame_3 - 0.089 12.1 3.8 0.083 12.2 3.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3602 PF12223.8 NODE_65454_length_245_cov_1.342857_g57513_i0reverse_frame_3 - 0.36 11.5 5.5 0.17 12.5 3.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3602) Arm-DNA-bind_5 PF17293.2 NODE_65454_length_245_cov_1.342857_g57513_i0reverse_frame_3 - 0.86 10.1 5.4 1.1 9.8 5.4 1.1 1 0 0 1 1 1 0 Arm DNA-binding domain DPM3 PF08285.11 NODE_65453_length_245_cov_1.357143_g57512_i0reverse_frame_3 - 0.043 14.0 0.6 0.05 13.8 0.6 1.1 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Beta-Casp PF10996.8 NODE_65453_length_245_cov_1.357143_g57512_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Beta-Casp domain Pox_P4A PF03395.14 NODE_65453_length_245_cov_1.357143_g57512_i0reverse_frame_2 - 3.9 4.9 6.5 4.6 4.7 6.5 1.0 1 0 0 1 1 1 0 Poxvirus P4A protein Ion_trans PF00520.31 NODE_65453_length_245_cov_1.357143_g57512_i0forward_frame_2 - 0.054 12.7 0.0 0.057 12.6 0.0 1.0 1 0 0 1 1 1 0 Ion transport protein Coiled PF05710.12 NODE_65449_length_245_cov_1.404762_g57508_i0forward_frame_3 - 0.53 11.1 8.6 0.82 10.5 8.6 1.3 1 0 0 1 1 1 0 Coiled coil DAD PF02109.16 NODE_65447_length_245_cov_1.447619_g57506_i0reverse_frame_3 - 0.016 15.5 1.0 0.019 15.3 1.0 1.0 1 0 0 1 1 1 0 DAD family Sipho_tail PF05709.11 NODE_65446_length_245_cov_1.495238_g57505_i0forward_frame_3 - 0.088 12.2 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Phage tail protein FAT PF02259.23 NODE_65445_length_245_cov_1.500000_g57504_i0forward_frame_2 - 9.1e-16 58.0 0.0 9.7e-16 57.9 0.0 1.0 1 0 0 1 1 1 1 FAT domain MuF_C PF18819.1 NODE_65445_length_245_cov_1.500000_g57504_i0forward_frame_2 - 0.0085 16.1 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 Phage MuF-C-terminal domain DUF5329 PF17263.2 NODE_65442_length_245_cov_1.519048_g57501_i0forward_frame_3 - 0.025 14.8 0.1 0.032 14.4 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5329) SF3A3 PF16837.5 NODE_65441_length_245_cov_1.519048_g57500_i0forward_frame_2 - 0.1 13.1 1.9 0.15 12.6 1.9 1.4 1 1 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 NA37 PF04245.13 NODE_65433_length_245_cov_1.614286_g57492_i0forward_frame_2 - 0.037 13.5 0.1 0.048 13.1 0.1 1.3 1 1 0 1 1 1 0 37-kD nucleoid-associated bacterial protein DUF5339 PF17274.2 NODE_65431_length_245_cov_1.700000_g57490_i0reverse_frame_2 - 0.051 14.4 0.2 0.11 13.4 0.1 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5339) DUF2924 PF11149.8 NODE_65429_length_245_cov_1.709524_g57488_i0forward_frame_3 - 0.081 13.3 0.0 0.087 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2924) EF-hand_6 PF13405.6 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 3.3e-06 26.6 0.1 7e-06 25.6 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 4.7e-06 25.8 0.1 7.6e-06 25.1 0.1 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 7.3e-06 26.3 0.0 8.7e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 4.1e-05 23.4 0.3 6.3e-05 22.7 0.1 1.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 4.1e-05 22.9 0.1 7.8e-05 22.0 0.1 1.5 1 0 0 1 1 1 1 EF hand RRM_1 PF00076.22 NODE_65424_length_245_cov_1.771429_g57483_i0reverse_frame_3 - 5.1e-16 58.3 0.1 5.8e-16 58.1 0.1 1.0 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Mgr1 PF08602.10 NODE_65421_length_245_cov_1.809524_g57480_i0forward_frame_2 - 0.14 10.9 0.2 0.16 10.7 0.2 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit RSV_NS2 PF03113.14 NODE_65418_length_245_cov_1.833333_g57477_i0forward_frame_3 - 0.09 12.8 0.6 0.11 12.5 0.6 1.1 1 0 0 1 1 1 0 Respiratory synctial virus non-structural protein NS2 UCH PF00443.29 NODE_65415_length_245_cov_1.876190_g57474_i0reverse_frame_2 - 1.6e-07 31.1 0.3 1.8e-07 30.9 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Uso1_p115_head PF04869.14 NODE_65415_length_245_cov_1.876190_g57474_i0forward_frame_2 - 0.057 12.6 0.1 0.062 12.4 0.1 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, head region Fels1 PF05666.11 NODE_65411_length_245_cov_1.928571_g57470_i0reverse_frame_3 - 0.064 12.9 0.2 0.097 12.3 0.2 1.2 1 0 0 1 1 1 0 Fels-1 Prophage Protein-like RCC1_2 PF13540.6 NODE_65410_length_245_cov_1.961905_g57469_i0forward_frame_3 - 1.6e-11 43.7 0.2 6.7e-08 32.1 0.0 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_65410_length_245_cov_1.961905_g57469_i0forward_frame_3 - 3.5e-11 43.6 0.1 2.3e-07 31.4 0.0 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat APOBEC1 PF18769.1 NODE_65409_length_245_cov_1.961905_g57468_i0forward_frame_2 - 0.057 13.7 0.2 0.059 13.6 0.2 1.2 1 0 0 1 1 1 0 APOBEC1 NAD_binding_11 PF14833.6 NODE_65404_length_245_cov_2.104762_g57463_i0reverse_frame_3 - 1.3e-12 48.0 0.0 1.4e-12 47.9 0.0 1.0 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DUF3081 PF11280.8 NODE_65404_length_245_cov_2.104762_g57463_i0reverse_frame_3 - 0.074 12.9 0.0 0.098 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3081) Phage_antiter_Q PF06323.11 NODE_65404_length_245_cov_2.104762_g57463_i0reverse_frame_2 - 0.11 12.0 0.4 0.11 12.0 0.4 1.1 1 0 0 1 1 1 0 Phage antitermination protein Q Glycophorin_A PF01102.18 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.0036 17.5 0.2 0.004 17.4 0.2 1.1 1 0 0 1 1 1 1 Glycophorin A Mid2 PF04478.12 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.021 14.6 3.9 0.024 14.5 3.9 1.1 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor TMEM154 PF15102.6 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.025 14.5 1.3 0.027 14.4 1.3 1.1 1 0 0 1 1 1 0 TMEM154 protein family Orf78 PF06024.12 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.036 14.3 0.7 0.041 14.2 0.7 1.1 1 0 0 1 1 1 0 Orf78 (ac78) Shisa PF13908.6 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.038 14.2 1.1 0.042 14.1 1.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator HCMV_UL124 PF17609.2 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.055 13.7 2.1 0.061 13.5 2.1 1.0 1 0 0 1 1 1 0 Family of unknown function Hydrophobin_2 PF06766.11 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.093 12.7 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Fungal hydrophobin EVI2A PF05399.11 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.2 11.2 2.9 0.25 10.9 2.9 1.1 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) NdhL PF10716.9 NODE_65398_length_245_cov_2.323810_g57457_i0reverse_frame_2 - 0.0028 17.6 0.9 0.0034 17.3 0.9 1.1 1 0 0 1 1 1 1 NADH dehydrogenase transmembrane subunit Slp PF03843.13 NODE_65395_length_245_cov_2.457143_g57454_i0reverse_frame_2 - 0.0083 15.5 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 Outer membrane lipoprotein Slp family Cor1 PF04803.12 NODE_65393_length_245_cov_2.476190_g57452_i0forward_frame_2 - 0.67 10.2 6.6 0.49 10.6 0.8 2.0 1 1 1 2 2 2 0 Cor1/Xlr/Xmr conserved region DUF728 PF05304.12 NODE_65391_length_245_cov_2.500000_g57450_i0reverse_frame_3 - 0.1 12.4 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF728) Asp5 PF17000.5 NODE_65391_length_245_cov_2.500000_g57450_i0forward_frame_3 - 0.087 13.0 0.1 0.15 12.2 0.1 1.5 1 1 0 1 1 1 0 Accessory secretory protein Sec, Asp5 DUF478 PF04334.12 NODE_65389_length_245_cov_2.547619_g57448_i0reverse_frame_3 - 0.018 15.1 0.5 0.026 14.6 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF478) DUF927 PF06048.11 NODE_65389_length_245_cov_2.547619_g57448_i0reverse_frame_2 - 0.024 14.2 0.3 0.027 14.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF927) CSD PF00313.22 NODE_65388_length_245_cov_2.561905_g57447_i0forward_frame_3 - 1.7e-20 72.6 0.0 2.1e-20 72.3 0.0 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain LPG_synthase_TM PF03706.13 NODE_65386_length_245_cov_2.600000_g57445_i0forward_frame_2 - 2.5e-06 27.3 6.2 2.9e-06 27.1 6.2 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Arfaptin PF06456.13 NODE_65384_length_245_cov_2.619048_g57443_i0forward_frame_3 - 0.048 13.2 0.2 0.058 12.9 0.2 1.1 1 0 0 1 1 1 0 Arfaptin-like domain ATP-grasp_2 PF08442.10 NODE_65382_length_245_cov_2.661905_g57441_i0forward_frame_2 - 6.1e-12 45.5 0.0 6.9e-12 45.3 0.0 1.0 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 NODE_65382_length_245_cov_2.661905_g57441_i0forward_frame_2 - 0.16 11.4 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 ATP-grasp domain Comm PF15957.5 NODE_65381_length_245_cov_2.700000_g57440_i0reverse_frame_2 - 0.33 11.3 4.9 0.34 11.3 4.9 1.2 1 0 0 1 1 1 0 Commissureless RBB1NT PF08169.11 NODE_65381_length_245_cov_2.700000_g57440_i0forward_frame_3 - 0.026 14.7 0.6 0.046 13.9 0.3 1.6 1 1 1 2 2 2 0 RBB1NT (NUC162) domain DUF3452 PF11934.8 NODE_65381_length_245_cov_2.700000_g57440_i0forward_frame_3 - 0.04 13.5 0.2 0.05 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) EGF_CA PF07645.15 NODE_65378_length_245_cov_2.876190_g57437_i0forward_frame_2 - 0.12 12.6 0.2 0.12 12.6 0.2 1.7 2 0 0 2 2 2 0 Calcium-binding EGF domain Suppressor_APC PF11414.8 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.002 18.2 2.2 0.0031 17.5 2.1 1.5 1 1 0 1 1 1 1 Adenomatous polyposis coli tumour suppressor protein DUF5082 PF16888.5 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.018 15.3 8.7 0.18 12.1 2.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Lectin_N PF03954.14 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.025 14.3 1.6 0.03 14.1 1.6 1.2 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain Desmo_N PF06771.11 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.025 14.9 0.9 0.34 11.3 0.1 2.0 1 1 1 2 2 2 0 Viral Desmoplakin N-terminus ADIP PF11559.8 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.027 14.5 9.3 0.031 14.3 9.3 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding AFP_2 PF18815.1 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.11 12.8 2.1 0.59 10.4 0.9 2.2 2 0 0 2 2 2 0 Bacterial antifreeze protein repeat PKcGMP_CC PF16808.5 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.11 12.4 16.1 0.23 11.3 6.1 3.4 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase LMP PF04778.12 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.19 11.6 7.9 0.22 11.4 7.9 1.0 1 0 0 1 1 1 0 LMP repeated region DUF3573 PF12097.8 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.21 10.4 1.1 0.21 10.4 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DUF4094 PF13334.6 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.23 11.9 6.4 1.5 9.3 6.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) YvrJ PF12841.7 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.26 10.8 2.1 0.38 10.3 0.1 2.0 2 0 0 2 2 2 0 YvrJ protein family HXXSHH PF07586.11 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.32 10.5 3.7 0.84 9.2 1.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1552) FlxA PF14282.6 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.35 10.9 7.7 0.48 10.5 7.7 1.2 1 0 0 1 1 1 0 FlxA-like protein Csm1_N PF18504.1 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.39 11.1 12.1 0.67 10.3 4.1 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain FAM76 PF16046.5 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.53 9.6 5.6 0.89 8.9 5.6 1.3 1 1 0 1 1 1 0 FAM76 protein Tho2 PF11262.8 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.69 9.1 8.7 0.81 8.8 8.7 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 BST2 PF16716.5 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 1.1 9.9 10.7 5.9 7.6 2.9 2.1 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 V_ATPase_I PF01496.19 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 1.5 6.7 6.7 1.6 6.5 6.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FapA PF03961.13 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 1.9 7.0 10.8 2.2 6.8 10.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 2.2 7.3 8.2 2.2 7.3 8.2 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 XhlA PF10779.9 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 2.3 8.5 8.5 0.86 9.8 1.6 2.2 2 0 0 2 2 2 0 Haemolysin XhlA Spc24 PF08286.11 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 5.3 7.3 11.3 1 9.7 4.5 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 LapA_dom PF06305.11 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 8.2 6.3 5.5 30 4.5 1.8 2.1 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Neur_chan_memb PF02932.16 NODE_65368_length_245_cov_3.738095_g57427_i0reverse_frame_3 - 1.1e-10 42.0 0.4 1.2e-10 41.9 0.4 1.0 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel transmembrane region GWT1 PF06423.12 NODE_65368_length_245_cov_3.738095_g57427_i0reverse_frame_3 - 0.061 13.5 0.7 0.06 13.5 0.7 1.1 1 0 0 1 1 1 0 GWT1 Auxin_inducible PF02519.14 NODE_65366_length_245_cov_4.452381_g57425_i0reverse_frame_3 - 0.026 14.7 0.2 0.032 14.4 0.2 1.2 1 0 0 1 1 1 0 Auxin responsive protein Cytokin_check_N PF10407.9 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_2 - 0.057 13.4 0.1 3.6 7.6 0.0 2.1 2 0 0 2 2 2 0 Cdc14 phosphatase binding protein N-terminus DUF3738 PF12543.8 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_2 - 0.25 11.5 6.0 16 5.6 0.3 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3738) Vac7 PF12751.7 NODE_65362_length_245_cov_14.290476_g57421_i0reverse_frame_3 - 0.1 12.0 1.1 0.1 12.0 1.1 1.0 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 DUF1516 PF07457.11 NODE_65357_length_245_cov_28.723810_g57416_i0forward_frame_3 - 0.14 12.4 5.8 0.075 13.2 0.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1516) Importin_rep PF18773.1 NODE_65354_length_245_cov_31.147619_g57413_i0reverse_frame_2 - 0.099 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Importin 13 repeat Gaa1 PF04114.14 NODE_65352_length_245_cov_35.176190_g57411_i0reverse_frame_2 - 0.17 10.9 0.1 0.15 11.0 0.1 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component FliC_SP PF12613.8 NODE_65352_length_245_cov_35.176190_g57411_i0forward_frame_3 - 1.7 9.2 8.6 0.65 10.5 5.7 1.7 1 1 1 2 2 2 0 Flagellin structural protein UPF0158 PF03682.13 NODE_65350_length_245_cov_37.957143_g57409_i0reverse_frame_3 - 0.01 15.8 0.1 0.013 15.5 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) Chorion_2 PF03964.15 NODE_65347_length_245_cov_42.671429_g57406_i0reverse_frame_2 - 0.32 11.9 13.0 1.1 10.2 12.9 1.7 1 1 1 2 2 2 0 Chorion family 2 DUF2514 PF10721.9 NODE_65347_length_245_cov_42.671429_g57406_i0forward_frame_3 - 0.0051 16.8 1.1 0.0072 16.4 1.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2514) Orai-1 PF07856.12 NODE_65344_length_245_cov_46.038095_g57403_i0forward_frame_2 - 0.014 15.1 0.2 0.24 11.0 0.0 2.0 2 0 0 2 2 2 0 Mediator of CRAC channel activity TrkA_N PF02254.18 NODE_65336_length_245_cov_56.885714_g57395_i0forward_frame_3 - 0.0097 16.2 0.0 0.011 16.0 0.0 1.0 1 0 0 1 1 1 1 TrkA-N domain KH_9 PF17904.1 NODE_65334_length_245_cov_58.557143_g57393_i0forward_frame_3 - 0.041 14.2 0.0 0.072 13.5 0.0 1.3 1 0 0 1 1 1 0 FMRP KH0 domain CtIP_N PF10482.9 NODE_65334_length_245_cov_58.557143_g57393_i0forward_frame_3 - 0.17 11.9 0.7 0.2 11.7 0.7 1.2 1 0 0 1 1 1 0 Tumour-suppressor protein CtIP N-terminal domain Herpes_gI PF01688.17 NODE_65332_length_245_cov_60.490476_g57391_i0reverse_frame_2 - 0.033 14.1 0.1 0.04 13.8 0.1 1.1 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein I Gamma-thionin PF00304.20 NODE_65332_length_245_cov_60.490476_g57391_i0forward_frame_3 - 0.9 9.9 7.3 14 6.0 6.8 2.6 1 1 2 3 3 3 0 Gamma-thionin family JmjC PF02373.22 NODE_65332_length_245_cov_60.490476_g57391_i0forward_frame_2 - 4e-06 27.2 0.1 7.2e-06 26.4 0.1 1.4 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_1 PF00190.22 NODE_65332_length_245_cov_60.490476_g57391_i0forward_frame_2 - 0.00055 19.6 0.0 0.00058 19.5 0.0 1.1 1 0 0 1 1 1 1 Cupin Cupin_2 PF07883.11 NODE_65332_length_245_cov_60.490476_g57391_i0forward_frame_2 - 0.01 15.5 0.1 0.017 14.9 0.0 1.4 1 1 0 1 1 1 0 Cupin domain DUF2939 PF11159.8 NODE_65330_length_245_cov_61.852381_g57389_i0forward_frame_3 - 0.083 13.3 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2939) DUF4051 PF13260.6 NODE_65330_length_245_cov_61.852381_g57389_i0forward_frame_2 - 0.19 11.5 0.3 0.36 10.6 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) Acyl-CoA_ox_N PF14749.6 NODE_65329_length_245_cov_63.452381_g57388_i0forward_frame_3 - 0.022 15.3 0.5 0.025 15.2 0.5 1.1 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal PPV_E1_C PF00519.17 NODE_65325_length_245_cov_67.157143_g57384_i0forward_frame_3 - 0.0039 16.1 0.1 0.0045 15.9 0.1 1.0 1 0 0 1 1 1 1 Papillomavirus helicase RhoGAP PF00620.27 NODE_65325_length_245_cov_67.157143_g57384_i0forward_frame_3 - 0.011 15.6 0.0 0.014 15.2 0.0 1.1 1 0 0 1 1 1 0 RhoGAP domain Myticin-prepro PF10690.9 NODE_65325_length_245_cov_67.157143_g57384_i0forward_frame_2 - 0.084 13.1 2.2 0.1 12.9 2.2 1.2 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel DUF4611 PF15387.6 NODE_65323_length_245_cov_82.495238_g57382_i0reverse_frame_2 - 0.31 11.3 11.3 0.38 11.0 10.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4611) TLP-20 PF06088.11 NODE_65323_length_245_cov_82.495238_g57382_i0reverse_frame_2 - 2.7 7.9 5.2 3 7.7 5.2 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) NOA36 PF06524.12 NODE_65323_length_245_cov_82.495238_g57382_i0reverse_frame_2 - 3.4 6.9 8.6 3.4 6.9 8.6 1.0 1 0 0 1 1 1 0 NOA36 protein CDC45 PF02724.14 NODE_65323_length_245_cov_82.495238_g57382_i0reverse_frame_2 - 5.2 5.2 10.9 5.3 5.2 10.9 1.0 1 0 0 1 1 1 0 CDC45-like protein GAPT PF11770.8 NODE_65323_length_245_cov_82.495238_g57382_i0forward_frame_2 - 5.2 6.9 4.8 3.2 7.6 0.7 2.0 2 0 0 2 2 2 0 GRB2-binding adapter (GAPT) Metallothio PF00131.20 NODE_65316_length_245_cov_117.690476_g57375_i0forward_frame_2 - 0.038 14.1 6.4 0.047 13.8 6.4 1.1 1 0 0 1 1 1 0 Metallothionein McyA_C PF12593.8 NODE_65314_length_245_cov_130.052381_g57373_i0reverse_frame_3 - 0.0091 15.8 1.1 0.034 13.9 0.0 2.3 3 0 0 3 3 3 1 Microcystin synthetase C terminal AP3D1 PF06375.11 NODE_65313_length_245_cov_131.971429_g57372_i0reverse_frame_3 - 0.11 12.8 7.1 0.12 12.6 7.1 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF4710 PF15828.5 NODE_65313_length_245_cov_131.971429_g57372_i0reverse_frame_2 - 0.16 12.1 11.1 0.23 11.6 11.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) zf-LITAF-like PF10601.9 NODE_65313_length_245_cov_131.971429_g57372_i0forward_frame_3 - 6.4 7.1 5.2 9.1 6.6 5.2 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Endothelin PF00322.17 NODE_65311_length_245_cov_140.866667_g57370_i0forward_frame_3 - 0.11 12.1 0.4 6.2 6.5 0.0 2.2 2 0 0 2 2 2 0 Endothelin family DUF1907 PF08925.11 NODE_65309_length_245_cov_167.495238_g57368_i0forward_frame_3 - 0.11 11.9 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1907) Rbx_binding PF18113.1 NODE_65306_length_245_cov_225.690476_g57365_i0forward_frame_2 - 0.2 11.5 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Rubredoxin binding C-terminal domain zf-RING_6 PF14835.6 NODE_65305_length_245_cov_230.585714_g57364_i0forward_frame_3 - 0.072 13.0 0.8 0.14 12.1 0.1 1.7 1 1 1 2 2 2 0 zf-RING of BARD1-type protein PcrB PF01884.17 NODE_65305_length_245_cov_230.585714_g57364_i0forward_frame_3 - 0.19 11.2 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 PcrB family Colicin_K PF17500.2 NODE_65303_length_245_cov_2418.600000_g57362_i0reverse_frame_3 - 1.6 9.3 10.9 6.2 7.4 10.9 1.8 1 1 0 1 1 1 0 Colicin-K Melittin PF01372.17 NODE_65303_length_245_cov_2418.600000_g57362_i0forward_frame_2 - 3.2 7.9 5.4 8.7 6.5 0.5 2.3 2 0 0 2 2 2 0 Melittin DUF4525 PF15027.6 NODE_65300_length_246_cov_0.943128_g57359_i0reverse_frame_2 - 0.096 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) zf_PR_Knuckle PF18445.1 NODE_65297_length_246_cov_1.037915_g57356_i0reverse_frame_2 - 0.12 12.2 0.2 0.12 12.2 0.2 2.4 3 0 0 3 3 3 0 PR zinc knuckle motif Herpes_IE68 PF02479.16 NODE_65295_length_246_cov_1.056872_g57354_i0forward_frame_3 - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus immediate early protein DUF2101 PF09874.9 NODE_65291_length_246_cov_1.104265_g57350_i0forward_frame_2 - 0.033 13.9 0.1 0.039 13.6 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Selenoprotein_S PF06936.11 NODE_65289_length_246_cov_1.132701_g57348_i0reverse_frame_3 - 0.34 10.7 1.7 0.41 10.4 1.7 1.2 1 1 0 1 1 1 0 Selenoprotein S (SelS) DUF1543 PF07566.12 NODE_65289_length_246_cov_1.132701_g57348_i0reverse_frame_2 - 0.039 13.7 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1543) WSK PF03832.13 NODE_65287_length_246_cov_1.132701_g57346_i0forward_frame_3 - 0.92 9.3 5.3 1.5 8.6 5.3 1.2 1 0 0 1 1 1 0 WSK motif DUF1098 PF06497.11 NODE_65286_length_246_cov_1.137441_g57345_i0reverse_frame_2 - 0.079 13.4 0.0 0.095 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1098) ASXH PF13919.6 NODE_65284_length_246_cov_1.137441_g57343_i0forward_frame_3 - 0.088 12.8 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Asx homology domain stn_TNFRSF12A PF12191.8 NODE_65282_length_246_cov_1.175355_g57341_i0reverse_frame_2 - 0.03 14.5 0.0 0.033 14.4 0.0 1.1 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain Tmemb_55A PF09788.9 NODE_65279_length_246_cov_1.246445_g57338_i0forward_frame_2 - 0.0031 16.6 0.7 0.0034 16.5 0.7 1.1 1 0 0 1 1 1 1 Transmembrane protein 55A Mo25 PF08569.11 NODE_65275_length_246_cov_1.327014_g57334_i0reverse_frame_2 - 0.11 11.8 0.2 0.11 11.8 0.2 1.0 1 0 0 1 1 1 0 Mo25-like DUF934 PF06073.12 NODE_65261_length_246_cov_1.516588_g57320_i0forward_frame_3 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF934) MORN PF02493.20 NODE_65260_length_246_cov_1.516588_g57319_i0reverse_frame_3 - 1.3e-15 56.3 25.4 2.2e-05 24.1 4.4 4.0 4 0 0 4 4 4 4 MORN repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks298.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks298.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks298.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks298.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5013 PF16405.5 NODE_65258_length_246_cov_1.526066_g57317_i0forward_frame_2 - 0.12 12.6 0.1 0.24 11.7 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5013) DUF1147 PF06615.11 NODE_65258_length_246_cov_1.526066_g57317_i0forward_frame_2 - 0.39 10.8 3.7 0.17 11.9 0.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1147) TF_Zn_Ribbon PF08271.12 NODE_65257_length_246_cov_1.545024_g57316_i0reverse_frame_2 - 0.061 12.9 0.2 0.099 12.2 0.2 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding Apelin PF15360.6 NODE_65254_length_246_cov_1.563981_g57313_i0reverse_frame_2 - 0.042 14.4 0.2 0.064 13.8 0.2 1.3 1 0 0 1 1 1 0 APJ endogenous ligand adh_short_C2 PF13561.6 NODE_65253_length_246_cov_1.563981_g57312_i0forward_frame_2 - 0.2 11.2 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Stb3 PF10330.9 NODE_65252_length_246_cov_1.573460_g57311_i0forward_frame_2 - 0.039 14.0 0.1 0.053 13.6 0.1 1.1 1 0 0 1 1 1 0 Putative Sin3 binding protein RCC1 PF00415.18 NODE_65251_length_246_cov_1.573460_g57310_i0reverse_frame_2 - 2.5e-18 66.4 6.1 1.2e-14 54.6 0.8 2.3 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_65251_length_246_cov_1.573460_g57310_i0reverse_frame_2 - 5.6e-15 54.7 5.4 1e-08 34.7 0.6 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF1181 PF06680.11 NODE_65251_length_246_cov_1.573460_g57310_i0reverse_frame_2 - 0.05 13.4 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1181) DUF3696 PF12476.8 NODE_65251_length_246_cov_1.573460_g57310_i0reverse_frame_2 - 0.15 12.5 0.0 0.21 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3696) Aldo_ket_red PF00248.21 NODE_65249_length_246_cov_1.592417_g57308_i0reverse_frame_3 - 8.8e-10 38.3 0.0 9.1e-10 38.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family RCC1 PF00415.18 NODE_65248_length_246_cov_1.597156_g57307_i0forward_frame_2 - 9.7e-11 42.1 0.4 1.4e-06 28.8 0.1 2.4 2 1 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_65248_length_246_cov_1.597156_g57307_i0forward_frame_2 - 0.0012 18.6 1.7 0.054 13.3 1.4 2.8 2 1 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat RsgA_GTPase PF03193.16 NODE_65246_length_246_cov_1.654028_g57305_i0reverse_frame_3 - 0.13 12.1 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 RsgA GTPase PH_13 PF16652.5 NODE_65243_length_246_cov_1.748815_g57302_i0forward_frame_3 - 0.1 12.4 0.1 0.14 12.0 0.1 1.3 1 1 0 1 1 1 0 Pleckstrin homology domain ArsA_HSP20 PF17886.1 NODE_65240_length_246_cov_1.791469_g57299_i0forward_frame_3 - 0.05 13.2 0.1 0.67 9.6 0.1 2.0 1 1 1 2 2 2 0 HSP20-like domain found in ArsA PH_3 PF14593.6 NODE_65234_length_246_cov_1.881517_g57293_i0forward_frame_2 - 0.065 13.3 0.1 0.082 13.0 0.1 1.1 1 0 0 1 1 1 0 PH domain aGPT-Pplase3 PF18746.1 NODE_65234_length_246_cov_1.881517_g57293_i0forward_frame_2 - 0.15 11.4 0.0 0.16 11.3 0.0 1.0 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 2OG-FeII_Oxy_3 PF13640.6 NODE_65233_length_246_cov_1.886256_g57292_i0forward_frame_3 - 0.0076 17.1 0.0 0.0081 17.0 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Mut7-C PF01927.16 NODE_65228_length_246_cov_1.962085_g57287_i0forward_frame_2 - 0.083 13.0 0.8 0.1 12.7 0.8 1.0 1 0 0 1 1 1 0 Mut7-C RNAse domain DUF4528 PF15031.6 NODE_65227_length_246_cov_1.976303_g57286_i0forward_frame_3 - 0.051 13.6 0.0 0.054 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) Nore1-SARAH PF16517.5 NODE_65223_length_246_cov_2.004739_g57282_i0reverse_frame_2 - 0.091 12.7 3.2 0.15 12.0 3.2 1.3 1 0 0 1 1 1 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain SUIM_assoc PF16619.5 NODE_65221_length_246_cov_2.037915_g57280_i0reverse_frame_3 - 5 7.3 9.6 8 6.6 9.6 1.4 1 0 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 DUF2574 PF10836.8 NODE_65221_length_246_cov_2.037915_g57280_i0reverse_frame_2 - 0.098 12.5 0.2 0.12 12.2 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) C_tripleX PF02363.19 NODE_65220_length_246_cov_2.042654_g57279_i0reverse_frame_3 - 1.3 9.4 16.2 0.44 10.9 12.5 2.1 2 0 0 2 2 2 0 Cysteine rich repeat OmpA PF00691.20 NODE_65219_length_246_cov_2.075829_g57278_i0forward_frame_2 - 0.016 15.6 0.2 0.02 15.2 0.2 1.1 1 0 0 1 1 1 0 OmpA family DUF2529 PF10740.9 NODE_65219_length_246_cov_2.075829_g57278_i0forward_frame_2 - 0.049 13.3 0.0 0.052 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) SWIRM PF04433.17 NODE_65213_length_246_cov_2.184834_g57272_i0reverse_frame_3 - 0.02 15.2 0.4 0.033 14.5 0.4 1.4 1 1 0 1 1 1 0 SWIRM domain DUF4191 PF13829.6 NODE_65213_length_246_cov_2.184834_g57272_i0forward_frame_3 - 0.18 11.1 0.1 0.19 11.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) zf-primase PF09329.11 NODE_65212_length_246_cov_2.184834_g57271_i0forward_frame_2 - 0.095 12.5 1.0 0.15 11.9 1.0 1.2 1 0 0 1 1 1 0 Primase zinc finger AA_permease_2 PF13520.6 NODE_65209_length_246_cov_2.279621_g57268_i0forward_frame_3 - 2.8e-12 46.2 7.7 2.9e-12 46.2 7.7 1.0 1 0 0 1 1 1 1 Amino acid permease Anoctamin PF04547.12 NODE_65209_length_246_cov_2.279621_g57268_i0forward_frame_3 - 0.003 16.5 8.0 0.0034 16.3 8.0 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel Rep_1 PF01446.17 NODE_65208_length_246_cov_2.284360_g57267_i0reverse_frame_3 - 0.2 11.1 0.3 0.2 11.1 0.3 1.0 1 0 0 1 1 1 0 Replication protein Fer4_22 PF17179.4 NODE_65208_length_246_cov_2.284360_g57267_i0forward_frame_3 - 0.016 16.1 0.4 0.02 15.7 0.4 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain hNIFK_binding PF12196.8 NODE_65208_length_246_cov_2.284360_g57267_i0forward_frame_2 - 0.21 11.1 0.2 1.5 8.3 0.0 2.1 2 0 0 2 2 2 0 FHA Ki67 binding domain of hNIFK BDV_P10 PF06515.11 NODE_65205_length_246_cov_2.417062_g57264_i0reverse_frame_3 - 0.058 13.4 0.2 0.072 13.1 0.2 1.2 1 0 0 1 1 1 0 Borna disease virus P10 protein SOG2 PF10428.9 NODE_65205_length_246_cov_2.417062_g57264_i0reverse_frame_2 - 0.24 10.6 2.0 0.25 10.5 2.0 1.0 1 0 0 1 1 1 0 RAM signalling pathway protein CTK3_C PF12350.8 NODE_65199_length_246_cov_2.568720_g57258_i0forward_frame_2 - 0.11 12.6 2.2 0.17 12.0 2.2 1.3 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 C-terminus WASH-7_mid PF14744.6 NODE_65196_length_246_cov_2.597156_g57255_i0reverse_frame_3 - 4.5e-20 72.0 1.0 4.7e-20 72.0 1.0 1.0 1 0 0 1 1 1 1 WASH complex subunit 7 Globin PF00042.22 NODE_65195_length_246_cov_2.668246_g57254_i0forward_frame_2 - 0.026 15.1 0.1 0.033 14.7 0.1 1.1 1 0 0 1 1 1 0 Globin Tagatose_6_P_K PF08013.11 NODE_65194_length_246_cov_2.725118_g57253_i0forward_frame_3 - 1e-31 110.1 0.2 1.1e-31 110.0 0.2 1.0 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase HCV_NS5a_1a PF08300.13 NODE_65194_length_246_cov_2.725118_g57253_i0forward_frame_2 - 0.11 12.7 1.7 0.17 12.0 1.4 1.5 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a zinc finger domain CAMSAP_CKK PF08683.11 NODE_65189_length_246_cov_2.895735_g57248_i0reverse_frame_2 - 2.5e-12 47.0 0.2 2.9e-12 46.8 0.2 1.0 1 0 0 1 1 1 1 Microtubule-binding calmodulin-regulated spectrin-associated DUF2895 PF11444.8 NODE_65187_length_246_cov_2.914692_g57246_i0reverse_frame_2 - 0.094 12.1 0.1 0.095 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2895) Homez PF11569.8 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.00035 20.0 0.2 0.00046 19.6 0.2 1.2 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez HTH_28 PF13518.6 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.031 14.4 0.0 0.046 13.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.038 13.8 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Homeodomain PF00046.29 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.049 13.5 0.1 0.078 12.8 0.1 1.4 1 0 0 1 1 1 0 Homeodomain RepB-RCR_reg PF10723.9 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.086 12.8 0.1 0.14 12.2 0.0 1.5 2 0 0 2 2 2 0 Replication regulatory protein RepB DUF3562 PF12085.8 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.17 11.5 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) Laminin_B PF00052.18 NODE_65177_length_246_cov_3.905213_g57236_i0reverse_frame_3 - 0.016 15.1 0.0 0.018 15.0 0.0 1.0 1 0 0 1 1 1 0 Laminin B (Domain IV) DUF3789 PF12664.7 NODE_65176_length_246_cov_6.056872_g57235_i0reverse_frame_3 - 0.0018 17.9 4.4 0.11 12.2 0.2 2.6 3 0 0 3 3 3 2 Protein of unknown function (DUF3789) Asparaginase_C PF17763.1 NODE_65176_length_246_cov_6.056872_g57235_i0reverse_frame_3 - 0.071 13.3 0.1 0.081 13.1 0.1 1.1 1 0 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain Isochorismatase PF00857.20 NODE_65176_length_246_cov_6.056872_g57235_i0reverse_frame_3 - 0.28 11.3 1.3 8.1 6.6 0.0 2.1 2 0 0 2 2 2 0 Isochorismatase family Pet100 PF09803.9 NODE_65175_length_246_cov_25.535545_g57234_i0forward_frame_2 - 0.0009 19.7 0.5 0.0011 19.4 0.5 1.2 1 0 0 1 1 1 1 Pet100 Ac76 PF05814.11 NODE_65175_length_246_cov_25.535545_g57234_i0forward_frame_2 - 5.4 7.1 8.1 9.8 6.3 8.1 1.5 1 1 0 1 1 1 0 Orf76 (Ac76) Arena_ncap_C PF17290.2 NODE_65173_length_246_cov_34.540284_g57232_i0reverse_frame_3 - 0.61 9.4 3.9 0.72 9.1 3.9 1.1 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain Tnp_22_trimer PF17489.2 NODE_65172_length_246_cov_36.796209_g57231_i0reverse_frame_2 - 0.081 12.9 0.7 0.081 12.9 0.7 2.5 3 0 0 3 3 3 0 L1 transposable element trimerization domain FAM199X PF15814.5 NODE_65169_length_246_cov_41.127962_g57228_i0forward_frame_3 - 0.36 9.9 7.9 0.37 9.8 7.9 1.0 1 0 0 1 1 1 0 Protein family FAM199X LZ3wCH PF18517.1 NODE_65166_length_246_cov_44.767773_g57225_i0reverse_frame_2 - 0.18 11.9 0.0 0.26 11.4 0.0 1.2 1 0 0 1 1 1 0 Leucine zipper with capping helix domain MscL PF01741.18 NODE_65164_length_246_cov_46.369668_g57223_i0forward_frame_3 - 0.0091 16.3 0.1 0.0096 16.2 0.1 1.1 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL DUF4083 PF13314.6 NODE_65164_length_246_cov_46.369668_g57223_i0forward_frame_3 - 0.15 12.0 3.2 0.22 11.5 3.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) CHASE3 PF05227.13 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.012 15.5 2.8 0.013 15.5 2.8 1.1 1 0 0 1 1 1 0 CHASE3 domain OST_P2 PF18235.1 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.015 15.3 1.3 0.017 15.1 1.3 1.1 1 0 0 1 1 1 0 Oligosaccharyltransferase Peripheral 2 domain DUF5446 PF17522.2 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.11 12.6 6.4 0.21 11.8 4.0 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5446) DUF1690 PF07956.11 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.13 12.7 7.5 0.14 12.6 7.5 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) UPF0242 PF06785.11 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.41 10.7 11.1 0.46 10.6 11.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.44 9.1 9.6 0.48 9.0 9.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A YtxH PF12732.7 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 4.8 7.8 8.5 36 5.0 8.5 2.0 1 1 0 1 1 1 0 YtxH-like protein Mtc PF03820.17 NODE_65161_length_246_cov_47.772512_g57220_i0forward_frame_3 - 0.0015 17.7 0.1 0.0017 17.4 0.1 1.1 1 0 0 1 1 1 1 Tricarboxylate carrier M-factor PF03855.13 NODE_65149_length_246_cov_66.118483_g57208_i0forward_frame_2 - 0.029 14.5 0.0 0.039 14.1 0.0 1.2 1 0 0 1 1 1 0 M-factor zf-CCCH_3 PF15663.5 NODE_65148_length_246_cov_67.943128_g57207_i0forward_frame_3 - 0.085 13.1 1.2 0.1 12.8 1.2 1.1 1 0 0 1 1 1 0 Zinc-finger containing family DUF4363 PF14276.6 NODE_65147_length_246_cov_67.995261_g57206_i0reverse_frame_3 - 0.00077 19.6 1.0 0.00089 19.4 1.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) YolD PF08863.10 NODE_65147_length_246_cov_67.995261_g57206_i0reverse_frame_3 - 0.054 13.6 2.2 0.16 12.0 2.2 1.7 1 1 0 1 1 1 0 YolD-like protein DUF1827 PF08860.10 NODE_65146_length_246_cov_68.668246_g57205_i0reverse_frame_3 - 0.0014 18.8 0.3 0.0016 18.7 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1827) DAHP_synth_2 PF01474.16 NODE_65144_length_246_cov_71.113744_g57203_i0reverse_frame_2 - 3.4e-07 29.1 0.0 3.7e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 Class-II DAHP synthetase family PI3K_p85B PF02192.16 NODE_65143_length_246_cov_72.616114_g57202_i0forward_frame_3 - 0.016 14.9 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 PI3-kinase family, p85-binding domain Chordopox_A20R PF05941.13 NODE_65140_length_246_cov_79.232227_g57199_i0reverse_frame_2 - 0.098 11.6 0.1 0.11 11.4 0.1 1.1 1 0 0 1 1 1 0 Chordopoxvirus A20R protein KdpC PF02669.15 NODE_65135_length_246_cov_100.018957_g57194_i0reverse_frame_2 - 0.096 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 K+-transporting ATPase, c chain Alg14 PF08660.11 NODE_65128_length_246_cov_141.720379_g57187_i0forward_frame_3 - 4.9e-06 26.6 0.0 6.2e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 Oligosaccharide biosynthesis protein Alg14 like DUF3980 PF13140.6 NODE_65125_length_246_cov_160.796209_g57184_i0forward_frame_2 - 0.013 15.9 1.8 0.016 15.7 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3980) APOBEC_C PF05240.14 NODE_65117_length_246_cov_3702.625592_g57176_i0forward_frame_2 - 0.072 13.1 0.3 0.14 12.2 0.2 1.5 1 1 0 1 1 1 0 APOBEC-like C-terminal domain Metallophos PF00149.28 ORF9946 - 7.7e-14 52.7 0.0 7.8e-14 52.7 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Sybindin PF04099.12 ORF99169 - 6.9e-15 55.2 0.1 7.7e-15 55.1 0.1 1.0 1 0 0 1 1 1 1 Sybindin-like family Peptidase_M36 PF02128.15 ORF98763 - 0.061 12.5 0.0 0.061 12.5 0.0 1.0 1 0 0 1 1 1 0 Fungalysin metallopeptidase (M36) IIGP PF05049.13 ORF98747 - 0.0089 15.1 0.1 0.0089 15.1 0.1 1.0 1 0 0 1 1 1 1 Interferon-inducible GTPase (IIGP) FidL_like PF15941.5 ORF98747 - 0.031 14.7 0.4 0.035 14.5 0.4 1.1 1 0 0 1 1 1 0 FidL-like putative membrane protein DUF4969 PF16339.5 ORF98735 - 0.056 13.8 0.7 0.07 13.5 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4969) CAV_VP3 PF04771.12 ORF98463 - 0.035 14.3 0.0 0.038 14.1 0.0 1.2 1 0 0 1 1 1 0 Chicken anaemia virus VP-3 protein Trehalase PF01204.18 ORF97691 - 9.3e-11 41.2 0.4 1.1e-10 40.9 0.4 1.1 1 0 0 1 1 1 1 Trehalase Cation_ATPase_N PF00690.26 ORF97523 - 0.0002 21.0 0.2 0.00029 20.4 0.2 1.2 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus DUF5598 PF18127.1 ORF97523 - 0.13 12.7 0.0 0.14 12.6 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5598) UPF0220 PF05255.11 ORF97480 - 0.015 14.9 1.6 0.019 14.5 1.5 1.2 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0220) RHH_1 PF01402.21 ORF96499 - 3.8e-11 42.5 0.6 5.6e-11 42.0 0.6 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_3 PF12651.7 ORF96499 - 0.016 15.2 0.4 0.031 14.3 0.4 1.5 1 1 0 1 1 1 0 Ribbon-helix-helix domain AKAP7_RIRII_bdg PF10470.9 ORF96499 - 0.057 13.5 0.1 0.076 13.1 0.1 1.2 1 0 0 1 1 1 0 PKA-RI-RII subunit binding domain of A-kinase anchor protein Peptidase_M36 PF02128.15 ORF96077 - 0.061 12.5 0.0 0.061 12.5 0.0 1.0 1 0 0 1 1 1 0 Fungalysin metallopeptidase (M36) CAAD PF14159.6 ORF95736 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Spec3 PF15795.5 ORF9559 - 3.9e-14 52.9 19.0 7.3e-12 45.7 19.0 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein DUF1201 PF06716.11 ORF9559 - 0.076 13.0 1.2 0.076 13.0 1.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1201) DUF1072 PF06380.11 ORF9559 - 0.58 10.1 3.4 0.38 10.7 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) PUL PF08324.11 ORF95216 - 0.012 14.9 0.0 0.015 14.6 0.0 1.0 1 0 0 1 1 1 0 PUL domain DNA_pol3_alpha PF07733.12 ORF95216 - 0.067 12.8 0.0 0.072 12.7 0.0 1.0 1 0 0 1 1 1 0 Bacterial DNA polymerase III alpha NTPase domain 2OG-FeII_Oxy_3 PF13640.6 ORF9418 - 3e-05 24.8 0.0 3.8e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-Fe_Oxy_2 PF10014.9 ORF9418 - 0.042 13.7 0.0 0.047 13.5 0.0 1.1 1 0 0 1 1 1 0 2OG-Fe dioxygenase 2OG-FeII_Oxy_5 PF13759.6 ORF9418 - 0.052 14.0 0.0 0.063 13.7 0.0 1.2 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase Oxygenase-NA PF09859.9 ORF9418 - 0.079 12.5 0.1 0.55 9.7 0.1 1.9 1 1 0 1 1 1 0 Oxygenase, catalysing oxidative methylation of damaged DNA DUF3839 PF12943.7 ORF94086 - 0.033 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) UXS1_N PF11803.8 ORF94050 - 0.049 14.0 0.1 0.092 13.1 0.0 1.5 1 1 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal PLDc_3 PF13918.6 ORF92825 - 0.14 11.8 0.1 0.17 11.5 0.1 1.1 1 0 0 1 1 1 0 PLD-like domain DUF4783 PF16022.5 ORF92681 - 0.12 12.5 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4783) Pkinase PF00069.25 ORF92501 - 1.4e-07 31.2 0.0 1.5e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Tub PF01167.18 ORF92239 - 2.4e-29 102.8 0.1 2.6e-29 102.7 0.1 1.0 1 0 0 1 1 1 1 Tub family RRS1 PF04939.12 ORF92239 - 0.069 13.0 0.4 0.076 12.9 0.4 1.1 1 0 0 1 1 1 0 Ribosome biogenesis regulatory protein (RRS1) FtsX PF02687.21 ORF91764 - 1.5 9.3 7.8 17 6.0 7.8 2.0 1 1 0 1 1 1 0 FtsX-like permease family 2OG-FeII_Oxy_3 PF13640.6 ORF91731 - 0.00017 22.4 0.0 0.00021 22.1 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Oxygenase-NA PF09859.9 ORF91731 - 0.00037 20.1 0.4 0.011 15.2 0.0 2.0 1 1 1 2 2 2 2 Oxygenase, catalysing oxidative methylation of damaged DNA cNMP_binding PF00027.29 ORF91669 - 5.8e-05 23.1 0.0 6.5e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MetallophosN PF16371.5 ORF91669 - 0.026 14.8 0.3 0.032 14.5 0.3 1.2 1 0 0 1 1 1 0 N terminal of Calcineurin-like phosphoesterase Albumin_I_a PF16720.5 ORF91663 - 0.081 12.8 0.1 0.13 12.2 0.1 1.4 1 1 0 1 1 1 0 Albumin I chain a Pkinase PF00069.25 ORF90981 - 5.5e-14 52.2 0.6 6e-14 52.0 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90981 - 1.1e-08 34.7 0.2 1.2e-08 34.6 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase WD40 PF00400.32 ORF90826 - 6.1e-06 26.9 0.8 0.00065 20.5 0.1 2.4 2 0 0 2 2 2 2 WD domain, G-beta repeat Spec3 PF15795.5 ORF90822 - 3.9e-14 52.9 19.0 7.3e-12 45.7 19.0 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein DUF1201 PF06716.11 ORF90822 - 0.076 13.0 1.2 0.076 13.0 1.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1201) DUF1072 PF06380.11 ORF90822 - 0.58 10.1 3.4 0.38 10.7 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) Sensor_TM1 PF13755.6 ORF90270 - 0.13 12.0 2.4 0.2 11.4 2.4 1.3 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain DEAD_2 PF06733.15 ORF90267 - 2.1e-13 50.2 0.9 2.1e-13 50.2 0.9 1.5 2 0 0 2 2 2 1 DEAD_2 Band_7_1 PF13421.6 ORF90267 - 0.021 14.5 0.1 0.026 14.2 0.1 1.0 1 0 0 1 1 1 0 SPFH domain-Band 7 family TAN PF11640.8 ORF90055 - 0.14 12.3 0.1 0.15 12.2 0.1 1.1 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair Peptidase_M14 PF00246.24 ORF89948 - 0.068 13.0 0.6 0.074 12.8 0.6 1.1 1 0 0 1 1 1 0 Zinc carboxypeptidase NICE-1 PF15845.5 ORF89825 - 9.3 7.1 12.1 3.4 8.5 0.9 2.1 1 1 1 2 2 2 0 Cysteine-rich C-terminal 1 family zf-CSL PF05207.13 ORF89632 - 1.5e-17 63.0 0.4 2e-17 62.7 0.4 1.2 1 0 0 1 1 1 1 CSL zinc finger Bax1-I PF01027.20 ORF89288 - 2e-10 40.8 10.4 2.2e-10 40.7 10.4 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF89288 - 0.068 12.7 4.0 0.071 12.7 4.0 1.0 1 0 0 1 1 1 0 Bax inhibitor 1 like Tricho_coat PF05892.11 ORF89199 - 0.02 14.6 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 Trichovirus coat protein CTXphi_pIII-N1 PF16710.5 ORF8791 - 0.15 12.2 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII Aldo_ket_red PF00248.21 ORF87883 - 9.4e-10 38.2 0.0 1e-09 38.0 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family ADP_ribosyl_GH PF03747.14 ORF8778 - 1.3e-12 48.1 0.0 1.3e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase UXS1_N PF11803.8 ORF86896 - 0.049 14.0 0.1 0.092 13.1 0.0 1.5 1 1 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal Adeno_PIX PF03955.14 ORF86891 - 8.9 6.5 15.1 17 5.6 14.7 1.6 1 1 0 1 1 1 0 Adenovirus hexon-associated protein (IX) Lact-deh-memb PF09330.11 ORF86321 - 1.7e-41 142.4 0.3 1.9e-41 142.3 0.3 1.0 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding FGFR3_TM PF18123.1 ORF85612 - 1.1 8.8 13.1 1.9 8.1 2.8 2.2 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Ins145_P3_rec PF08709.11 ORF85305 - 1.4e-11 44.0 0.0 1.4e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Inositol 1,4,5-trisphosphate/ryanodine receptor IBN_N PF03810.19 ORF85153 - 8.1e-08 32.1 0.0 1.1e-07 31.6 0.0 1.3 1 0 0 1 1 1 1 Importin-beta N-terminal domain FANCI_HD1 PF14679.6 ORF85153 - 0.074 13.0 0.1 1.4 8.9 0.0 2.0 1 1 1 2 2 2 0 FANCI helical domain 1 Sugar_tr PF00083.24 ORF85104 - 3.8e-08 32.6 3.6 4e-08 32.6 3.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF998 PF06197.13 ORF85104 - 0.091 12.4 0.1 0.1 12.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF998) Pkinase PF00069.25 ORF84934 - 0.035 13.5 0.1 0.098 12.0 0.0 1.6 2 0 0 2 2 2 0 Protein kinase domain DUF4265 PF14085.6 ORF84768 - 0.075 13.0 0.0 0.084 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) zf-H2C2_2 PF13465.6 ORF84629 - 2.3e-09 37.2 12.2 1.1e-08 35.1 1.0 3.3 3 1 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF84629 - 1e-07 32.2 6.1 7.4e-05 23.3 1.7 2.6 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF84629 - 2.3e-07 30.9 6.8 1.7e-06 28.2 2.1 2.9 4 0 0 4 4 4 2 Zinc finger, C2H2 type zf-C2H2_8 PF15909.5 ORF84629 - 6.5e-05 23.2 1.8 0.00011 22.5 1.8 1.4 1 1 0 1 1 1 1 C2H2-type zinc ribbon zf-H2C2_5 PF13909.6 ORF84629 - 0.005 16.6 4.9 0.005 16.6 4.9 2.5 2 0 0 2 2 2 1 C2H2-type zinc-finger domain zf_ZIC PF18366.1 ORF84629 - 0.019 15.1 1.3 6.6 6.9 0.5 2.5 1 1 1 2 2 2 0 Zic proteins zinc finger domain zf-C2H2_2 PF12756.7 ORF84629 - 0.02 15.2 6.1 1.2 9.5 0.1 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) DUF4764 PF15961.5 ORF84629 - 0.023 13.4 1.6 0.025 13.3 1.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4764) Zn-ribbon_8 PF09723.10 ORF84629 - 0.034 14.3 1.1 0.39 10.9 0.4 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zf-met PF12874.7 ORF84629 - 0.075 13.4 3.6 0.085 13.3 0.8 2.4 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2HC_2 PF13913.6 ORF84629 - 0.086 12.8 5.3 5.7 7.0 1.0 3.2 3 1 0 3 3 3 0 zinc-finger of a C2HC-type zf-C2HE PF16278.5 ORF84629 - 3.2 8.3 8.5 12 6.5 8.5 2.0 1 1 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_6 PF13912.6 ORF84629 - 6.5 6.9 14.8 0.32 11.0 6.0 2.7 3 0 0 3 3 3 0 C2H2-type zinc finger INCENP_N PF12178.8 ORF84152 - 0.15 12.1 0.7 0.67 10.0 0.2 2.0 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal RbsD_FucU PF05025.13 ORF8237 - 1.5e-20 74.0 0.4 1.6e-20 73.9 0.4 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family NitrOD5 PF11537.8 ORF8237 - 0.0027 17.8 0.1 0.0034 17.5 0.1 1.1 1 0 0 1 1 1 1 Nitrosopumilus output domain 5 HydF_tetramer PF18133.1 ORF8237 - 0.019 14.7 0.2 0.021 14.6 0.2 1.2 1 0 0 1 1 1 0 Hydrogen maturase F tetramerization domain AlaDh_PNT_C PF01262.21 ORF8237 - 0.043 13.1 0.1 0.049 12.9 0.1 1.1 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DUF3678 PF12435.8 ORF81985 - 0.051 13.0 1.0 8.5 5.8 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) Humanin PF15040.6 ORF81625 - 0.19 11.2 2.8 7.6 6.1 1.2 2.6 2 0 0 2 2 2 0 Humanin family Siah-Interact_N PF09032.11 ORF81252 - 0.095 13.0 0.5 0.12 12.7 0.5 1.2 1 1 0 1 1 1 0 Siah interacting protein, N terminal APG6 PF04111.12 ORF80784 - 4.9e-14 52.7 0.0 5.4e-14 52.5 0.0 1.0 1 0 0 1 1 1 1 Apg6 BARA domain Carb_kinase PF01256.17 ORF80453 - 2.5e-17 63.2 1.4 2.8e-17 63.0 1.4 1.0 1 0 0 1 1 1 1 Carbohydrate kinase Herpes_UL16 PF03044.14 ORF79270 - 0.081 12.2 0.0 0.093 12.0 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family MatE PF01554.18 ORF79013 - 1.8e-06 27.7 1.7 1.8e-06 27.7 1.7 1.0 1 0 0 1 1 1 1 MatE Arena_glycoprot PF00798.18 ORF78734 - 0.041 12.5 0.1 0.041 12.5 0.1 1.0 1 0 0 1 1 1 0 Arenavirus glycoprotein BCS1_N PF08740.11 ORF78685 - 0.0041 17.1 0.0 0.0044 17.0 0.0 1.1 1 0 0 1 1 1 1 BCS1 N terminal Agarase_CBM PF17992.1 ORF78685 - 0.052 13.1 0.1 0.057 13.0 0.1 1.1 1 0 0 1 1 1 0 Agarase CBM like domain ABC_transp_aux PF09822.9 ORF78474 - 0.0019 17.7 0.4 0.002 17.6 0.4 1.1 1 0 0 1 1 1 1 ABC-type uncharacterized transport system LRR_9 PF14580.6 ORF78474 - 0.013 15.0 0.1 0.014 14.9 0.1 1.1 1 0 0 1 1 1 0 Leucine-rich repeat DnaI_N PF07319.11 ORF78474 - 0.1 13.3 1.7 0.14 12.8 1.0 1.5 1 1 1 2 2 2 0 Primosomal protein DnaI N-terminus UvsW PF11637.8 ORF78474 - 0.11 12.6 0.1 0.25 11.5 0.0 1.6 1 1 0 1 1 1 0 ATP-dependant DNA helicase UvsW GWT1 PF06423.12 ORF78451 - 0.078 13.1 2.1 0.083 13.0 2.1 1.2 1 0 0 1 1 1 0 GWT1 DUF3839 PF12943.7 ORF78391 - 0.033 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) BenE PF03594.13 ORF78027 - 1.3e-27 96.6 4.4 1.4e-27 96.4 4.4 1.0 1 0 0 1 1 1 1 Benzoate membrane transport protein BPD_transp_1 PF00528.22 ORF78027 - 0.057 13.1 2.5 0.074 12.8 2.5 1.1 1 0 0 1 1 1 0 Binding-protein-dependent transport system inner membrane component VirB3 PF05101.13 ORF78027 - 0.19 12.0 0.1 0.19 12.0 0.1 1.7 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein DUF2062 PF09835.9 ORF78027 - 1.5 8.6 6.7 11 5.8 6.2 2.0 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) DUF3040 PF11239.8 ORF78027 - 2.1 8.7 5.4 1.3 9.3 3.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) OCRE PF17780.1 ORF77417 - 0.041 13.9 0.1 0.068 13.2 0.1 1.4 1 0 0 1 1 1 0 OCRE domain Haemagg_act PF05860.13 ORF77361 - 0.0077 16.1 0.5 0.083 12.8 0.0 1.9 1 1 1 2 2 2 2 haemagglutination activity domain Hen1_Lam_C PF18441.1 ORF77329 - 0.099 12.5 1.5 6.4 6.6 0.1 2.0 1 1 1 2 2 2 0 Hen1 La-motif C-terminal domain Orexin_rec2 PF03827.13 ORF76567 - 0.13 12.3 0.2 0.32 11.0 0.0 1.7 1 1 1 2 2 2 0 Orexin receptor type 2 MFS_4 PF06779.14 ORF76246 - 1.1e-19 71.0 5.9 1.2e-19 70.8 5.9 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Asp-Al_Ex PF06826.12 ORF76246 - 0.007 16.2 3.6 0.0071 16.2 3.6 1.0 1 0 0 1 1 1 1 Predicted Permease Membrane Region DUF948 PF06103.11 ORF76219 - 0.0012 19.0 8.1 0.0014 18.8 8.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) SSP160 PF06933.11 ORF76219 - 3.7 5.6 17.6 5.1 5.2 17.6 1.3 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Torsin PF06309.11 ORF76089 - 0.11 12.6 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Torsin CdiA_C PF18451.1 ORF75620 - 0.0055 16.9 0.4 0.0063 16.7 0.4 1.1 1 0 0 1 1 1 1 Contact-dependent growth inhibition CdiA C-terminal domain CHASE7 PF17151.4 ORF75585 - 0.031 13.9 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Periplasmic sensor domain SHIPPO-rpt PF07004.12 ORF7535 - 0.011 16.6 0.0 0.66 11.0 0.0 2.3 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat CAAD PF14159.6 ORF74938 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Exc PF07825.11 ORF73251 - 0.022 14.7 2.5 0.033 14.2 2.5 1.3 1 0 0 1 1 1 0 Excisionase-like protein Herpes_LMP1 PF05297.11 ORF73004 - 0.0032 16.7 0.5 0.0035 16.6 0.5 1.1 1 0 0 1 1 1 1 Herpesvirus latent membrane protein 1 (LMP1) Amnionless PF14828.6 ORF73004 - 0.092 11.6 0.0 0.092 11.6 0.0 1.1 1 0 0 1 1 1 0 Amnionless Phage_Gp23 PF10669.9 ORF73004 - 1.5 9.2 5.4 0.27 11.6 0.5 1.8 1 1 1 2 2 2 0 Protein gp23 (Bacteriophage A118) Vpu PF00558.19 ORF73004 - 4.4 7.1 10.2 0.53 10.1 3.2 2.0 1 1 1 2 2 2 0 Vpu protein Pox_D2 PF04701.13 ORF7287 - 0.0091 16.2 1.1 0.075 13.2 0.8 1.9 1 1 1 2 2 2 2 Pox virus D2 protein Remorin_C PF03763.13 ORF72301 - 0.079 12.9 3.2 0.093 12.6 3.2 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region Calici_MSP PF05752.11 ORF72243 - 0.08 12.8 0.0 0.08 12.8 0.0 1.1 1 0 0 1 1 1 0 Calicivirus minor structural protein PNP_UDP_1 PF01048.20 ORF71963 - 0.029 13.6 0.0 0.031 13.5 0.0 1.2 1 0 0 1 1 1 0 Phosphorylase superfamily STE PF02200.16 ORF71929 - 0.0019 18.6 0.2 0.0021 18.4 0.2 1.1 1 0 0 1 1 1 1 STE like transcription factor Pkinase PF00069.25 ORF7184 - 9.4e-08 31.7 0.0 1.1e-07 31.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain TA_inhibitor PF17574.2 ORF71526 - 0.19 11.8 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Inhibitor of toxin/antitoxin system (Gp4.5) DUF4939 PF16297.5 ORF71391 - 0.013 15.4 0.1 0.015 15.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4939) DUF2543 PF10820.8 ORF70186 - 9.7e-48 160.3 0.5 1.1e-47 160.2 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2543) Pox_Ag35 PF03286.14 ORF6980 - 0.028 14.2 8.1 0.031 14.1 8.1 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Trypan_PARP PF05887.11 ORF6980 - 0.13 12.2 2.9 0.14 12.1 2.9 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) MIF4G_like_2 PF09090.11 ORF6980 - 0.16 11.4 3.9 0.18 11.3 3.9 1.0 1 0 0 1 1 1 0 MIF4G like DUF4065 PF13274.6 ORF6980 - 0.36 11.7 4.0 0.46 11.4 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4065) PDCD2_C PF04194.13 ORF6980 - 0.98 9.5 5.6 1.1 9.3 5.6 1.0 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain BCS1_N PF08740.11 ORF69746 - 0.0041 17.1 0.0 0.0044 17.0 0.0 1.1 1 0 0 1 1 1 1 BCS1 N terminal Agarase_CBM PF17992.1 ORF69746 - 0.052 13.1 0.1 0.057 13.0 0.1 1.1 1 0 0 1 1 1 0 Agarase CBM like domain PP-binding PF00550.25 ORF69577 - 1.5e-10 41.3 0.0 1.7e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 Phosphopantetheine attachment site CD20 PF04103.15 ORF6935 - 0.0066 16.5 0.6 0.0078 16.3 0.6 1.1 1 0 0 1 1 1 1 CD20-like family DUF3937 PF13073.6 ORF6935 - 0.49 10.6 6.1 1.1 9.4 1.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3937) STE PF02200.16 ORF69161 - 0.0019 18.6 0.2 0.0021 18.4 0.2 1.1 1 0 0 1 1 1 1 STE like transcription factor NitrOD5 PF11537.8 ORF68921 - 0.02 15.0 0.0 0.024 14.8 0.0 1.1 1 0 0 1 1 1 0 Nitrosopumilus output domain 5 RPN7 PF10602.9 ORF68888 - 0.053 13.2 2.1 1.4 8.5 0.6 2.1 1 1 1 2 2 2 0 26S proteasome subunit RPN7 DUF1664 PF07889.12 ORF68888 - 0.065 13.3 2.4 0.07 13.2 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) PARP PF00644.20 ORF68338 - 0.0035 16.9 1.3 0.0039 16.8 1.3 1.1 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Cyt-b5 PF00173.28 ORF67602 - 5.9e-23 80.8 0.1 6.3e-23 80.7 0.1 1.0 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain zf-CCHH PF10283.9 ORF67458 - 0.11 12.5 1.1 3.2 7.8 0.0 2.3 2 0 0 2 2 2 0 PBZ domain Herpes_TAF50 PF03326.13 ORF67439 - 0.0096 14.6 2.2 0.0089 14.7 2.2 1.0 1 0 0 1 1 1 1 Herpesvirus transcription activation factor (transactivator) DUF1580 PF07618.11 ORF67132 - 0.013 15.1 0.1 0.023 14.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) WD40 PF00400.32 ORF67051 - 0.0015 19.3 0.5 0.63 11.0 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat MCRS_N PF13325.6 ORF65518 - 0.062 13.3 1.1 0.068 13.2 1.1 1.1 1 0 0 1 1 1 0 N-terminal region of micro-spherule protein BRCT_3 PF18428.1 ORF65495 - 0.016 15.3 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain Sel1 PF08238.12 ORF63170 - 7.1e-14 51.9 0.3 4.6e-06 27.1 0.0 2.1 2 0 0 2 2 2 2 Sel1 repeat TPR_6 PF13174.6 ORF63170 - 0.0049 17.4 0.2 1.3 9.8 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat Peptidase_M36 PF02128.15 ORF63164 - 0.061 12.5 0.0 0.061 12.5 0.0 1.0 1 0 0 1 1 1 0 Fungalysin metallopeptidase (M36) DUF2164 PF09932.9 ORF63040 - 0.0045 17.0 0.1 0.0062 16.6 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2164) MiaE PF06175.11 ORF63040 - 0.022 14.4 1.2 0.021 14.4 1.2 1.0 1 0 0 1 1 1 0 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) TM140 PF14985.6 ORF62369 - 0.055 13.0 1.4 0.055 13.0 1.4 1.1 1 0 0 1 1 1 0 TM140 protein family Tricho_coat PF05892.11 ORF62161 - 0.02 14.6 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 Trichovirus coat protein Ion_trans PF00520.31 ORF61778 - 0.00032 20.0 3.3 0.00036 19.9 3.3 1.0 1 0 0 1 1 1 1 Ion transport protein GxGYxYP_N PF16216.5 ORF61778 - 0.099 12.8 0.0 0.11 12.7 0.0 1.0 1 0 0 1 1 1 0 GxGYxY sequence motif in domain of unknown function N-terminal Toxin_7 PF05980.12 ORF61580 - 0.045 14.0 2.0 0.045 14.0 2.0 2.2 3 0 0 3 3 3 0 Toxin 7 UPF0506 PF11703.8 ORF61580 - 0.071 13.5 2.6 0.4 11.1 0.1 2.2 2 1 0 2 2 2 0 UPF0506 Spc7 PF08317.11 ORF61305 - 0.049 12.5 4.3 0.054 12.4 4.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Hen1_Lam_C PF18441.1 ORF61241 - 0.099 12.5 1.5 6.4 6.6 0.1 2.0 1 1 1 2 2 2 0 Hen1 La-motif C-terminal domain Inhibitor_I69 PF13734.6 ORF61161 - 0.035 14.5 0.0 0.038 14.4 0.0 1.1 1 0 0 1 1 1 0 Spi protease inhibitor Ank_5 PF13857.6 ORF60165 - 9.3e-06 25.8 0.0 0.0081 16.5 0.0 2.1 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF60165 - 4.6e-05 23.9 0.0 0.00021 21.8 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF60165 - 0.0002 21.9 0.0 0.00026 21.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF60165 - 0.0014 18.9 0.0 0.05 14.2 0.0 2.4 2 1 1 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF60165 - 0.012 16.0 0.0 0.66 10.5 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeat Paramyxo_PNT PF14320.6 ORF59783 - 0.095 11.8 0.2 0.1 11.7 0.2 1.1 1 0 0 1 1 1 0 Phosphoprotein P region PNT disordered DUF3839 PF12943.7 ORF59237 - 0.033 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) DUF1768 PF08719.11 ORF59173 - 0.0018 18.5 0.0 0.0023 18.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) Pkinase PF00069.25 ORF58732 - 0.00049 19.5 0.0 0.0005 19.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Tropomyosin PF00261.20 ORF58314 - 0.00025 20.5 5.1 0.00063 19.2 5.2 1.5 1 1 0 1 1 1 1 Tropomyosin TolA_bind_tri PF16331.5 ORF58314 - 0.00056 19.9 1.9 0.00072 19.6 1.9 1.2 1 0 0 1 1 1 1 TolA binding protein trimerisation Nsp1_C PF05064.13 ORF58314 - 0.0016 18.2 2.6 0.002 17.9 1.9 1.4 1 1 0 1 1 1 1 Nsp1-like C-terminal region Med2 PF11214.8 ORF58314 - 0.011 15.9 2.2 0.016 15.4 2.2 1.5 1 1 0 1 1 1 0 Mediator complex subunit 2 Sigma70_ner PF04546.13 ORF58314 - 0.013 15.4 3.6 0.014 15.3 3.6 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region KapB PF08810.10 ORF58314 - 0.013 15.6 1.3 0.015 15.5 1.3 1.1 1 0 0 1 1 1 0 Kinase associated protein B SbsC_C PF18058.1 ORF58314 - 0.02 15.1 1.5 0.027 14.7 1.2 1.4 1 1 0 1 1 1 0 SbsC C-terminal domain IFT57 PF10498.9 ORF58314 - 0.032 13.2 5.1 0.033 13.2 5.1 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Med4 PF10018.9 ORF58314 - 0.037 13.7 4.7 0.039 13.6 4.7 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Tropomyosin_1 PF12718.7 ORF58314 - 0.044 13.9 7.3 0.063 13.4 7.3 1.2 1 0 0 1 1 1 0 Tropomyosin like Cep57_CLD_2 PF14197.6 ORF58314 - 0.046 13.8 6.8 4.2 7.5 0.8 2.9 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 FlaC_arch PF05377.11 ORF58314 - 0.071 13.5 3.4 2.3 8.7 0.9 2.6 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) ZapB PF06005.12 ORF58314 - 0.087 13.3 5.4 0.1 13.1 5.4 1.2 1 0 0 1 1 1 0 Cell division protein ZapB CENP-H PF05837.12 ORF58314 - 0.092 13.2 4.7 0.11 13.0 4.7 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) BST2 PF16716.5 ORF58314 - 0.12 13.0 3.8 0.24 12.0 3.8 1.6 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 HSCB_C PF07743.13 ORF58314 - 0.17 12.4 4.8 0.7 10.4 2.4 2.0 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain DUF1664 PF07889.12 ORF58314 - 0.19 11.8 2.1 0.22 11.6 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF58314 - 0.19 11.0 3.6 0.22 10.8 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ATP-synt_B PF00430.18 ORF58314 - 0.2 11.8 4.1 0.82 9.8 3.8 1.8 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) Fib_alpha PF08702.10 ORF58314 - 0.22 11.7 4.8 0.27 11.4 4.8 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family GrpE PF01025.19 ORF58314 - 0.58 9.8 8.1 5 6.7 8.1 1.9 1 1 0 1 1 1 0 GrpE XhlA PF10779.9 ORF58314 - 1.7 8.9 6.1 1.9 8.8 2.4 2.1 1 1 1 2 2 2 0 Haemolysin XhlA TMPIT PF07851.13 ORF58314 - 2.3 7.4 5.8 2.3 7.4 5.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein ResB PF05140.14 ORF58307 - 0.075 11.8 4.0 0.087 11.5 4.0 1.1 1 0 0 1 1 1 0 ResB-like family RHD_dimer PF16179.5 ORF58043 - 0.22 11.5 0.0 0.3 11.1 0.0 1.2 1 0 0 1 1 1 0 Rel homology dimerisation domain Tricho_coat PF05892.11 ORF57626 - 0.02 14.6 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 Trichovirus coat protein DUF2389 PF09493.10 ORF57197 - 0.16 12.6 0.0 0.25 12.0 0.0 1.4 1 0 0 1 1 1 0 Tryptophan-rich protein (DUF2389) EMI PF07546.13 ORF56863 - 0.12 13.1 0.1 0.17 12.7 0.1 1.2 1 0 0 1 1 1 0 EMI domain WbqC PF08889.11 ORF56807 - 0.057 13.3 0.1 0.057 13.3 0.1 1.2 1 0 0 1 1 1 0 WbqC-like protein family Ank_2 PF12796.7 ORF56728 - 1.9e-08 34.7 0.0 3.9e-08 33.8 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF56728 - 1.1e-07 32.2 0.0 0.00011 22.7 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF56728 - 6e-05 23.2 0.0 0.00011 22.4 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF56728 - 0.00013 22.3 0.0 0.029 14.8 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF56728 - 0.02 15.4 0.0 0.83 10.4 0.0 2.5 3 1 0 3 3 3 0 Ankyrin repeat CAAD PF14159.6 ORF56209 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase KKLCAg1 PF15204.6 ORF56018 - 0.08 13.0 1.3 0.11 12.7 1.3 1.3 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 zf-RING_UBOX PF13445.6 ORF55879 - 3.9e-11 42.8 4.5 6.3e-11 42.1 4.5 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_2 PF13639.6 ORF55879 - 8.1e-09 35.7 3.4 1.3e-08 35.1 3.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF55879 - 2.7e-08 33.5 4.0 4.5e-08 32.8 4.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF55879 - 2.1e-07 30.8 5.0 2.8e-07 30.4 5.0 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF55879 - 2.4e-06 27.3 5.1 8.9e-06 25.5 5.1 2.0 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF55879 - 1.7e-05 24.6 4.3 2.4e-05 24.1 4.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF55879 - 1.8e-05 24.8 5.1 5.6e-05 23.2 5.2 1.8 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-rbx1 PF12678.7 ORF55879 - 0.00011 22.4 2.0 0.00022 21.5 2.0 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF55879 - 0.0005 19.7 1.9 0.0005 19.7 1.9 1.7 2 0 0 2 2 2 1 RING-like zinc finger Prok-RING_4 PF14447.6 ORF55879 - 0.00085 19.1 2.7 0.001 18.9 1.7 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF55879 - 0.0019 17.9 5.0 0.0063 16.3 5.2 1.7 1 1 1 2 2 2 1 RING/Ubox like zinc-binding domain zf-RING_6 PF14835.6 ORF55879 - 0.014 15.3 0.7 0.022 14.6 0.7 1.4 1 0 0 1 1 1 0 zf-RING of BARD1-type protein FYVE PF01363.21 ORF55879 - 0.031 14.4 2.5 0.059 13.5 2.5 1.6 1 1 0 1 1 1 0 FYVE zinc finger zf-ANAPC11 PF12861.7 ORF55879 - 0.089 12.9 1.8 0.28 11.2 1.8 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger PHD PF00628.29 ORF55879 - 0.13 12.2 4.2 0.29 11.1 4.2 1.6 1 1 0 1 1 1 0 PHD-finger IBR PF01485.21 ORF55879 - 0.55 10.5 6.1 3.4 8.0 2.8 2.6 2 1 1 3 3 3 0 IBR domain, a half RING-finger domain GDP_Man_Dehyd PF16363.5 ORF5535 - 0.12 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Elf1 PF05129.13 ORF55160 - 0.0054 16.7 0.0 1.2 9.2 0.0 2.1 2 0 0 2 2 2 2 Transcription elongation factor Elf1 like zinc_ribbon_4 PF13717.6 ORF55160 - 0.019 14.9 0.6 0.2 11.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain NinF PF05810.12 ORF55160 - 0.05 13.5 1.7 0.24 11.3 0.1 2.2 2 0 0 2 2 2 0 NinF protein XAF1_C PF18608.1 ORF55160 - 0.052 13.1 3.5 1 9.0 0.7 2.1 2 0 0 2 2 2 0 XIAP-associated factor 1 C-terminal domain zf-CHCC PF10276.9 ORF55160 - 0.066 13.3 0.1 0.066 13.3 0.1 2.7 3 0 0 3 3 3 0 Zinc-finger domain zf-ribbon_3 PF13248.6 ORF55160 - 0.073 12.5 7.1 0.34 10.4 0.0 2.7 3 0 0 3 3 3 0 zinc-ribbon domain DZR PF12773.7 ORF55160 - 0.086 12.9 4.7 0.6 10.2 4.7 2.1 1 1 0 1 1 1 0 Double zinc ribbon Zn_ribbon_recom PF13408.6 ORF55160 - 8.3 7.0 8.2 8.7 6.9 1.3 2.3 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain Bac_thur_toxin PF01338.18 ORF55017 - 0.11 11.9 3.7 0.11 11.9 3.7 1.1 1 0 0 1 1 1 0 Bacillus thuringiensis toxin NDK PF00334.19 ORF54890 - 4.1e-05 23.6 0.0 4.7e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Nucleoside diphosphate kinase G-patch_2 PF12656.7 ORF54530 - 0.087 12.9 0.5 0.14 12.2 0.1 1.6 2 0 0 2 2 2 0 G-patch domain Prok-E2_C PF14459.6 ORF54419 - 0.032 14.4 0.9 0.039 14.1 0.9 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family C CBM_19 PF03427.13 ORF54122 - 0.1 12.6 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Carbohydrate binding domain (family 19) PRRSV_Env PF02340.15 ORF54122 - 0.15 11.4 2.5 0.16 11.3 2.5 1.1 1 0 0 1 1 1 0 PRRSV putative envelope protein ClpB_D2-small PF10431.9 ORF53108 - 0.13 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 C-terminal, D2-small domain, of ClpB protein UXS1_N PF11803.8 ORF52478 - 0.049 14.0 0.1 0.092 13.1 0.0 1.5 1 1 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal EVI2A PF05399.11 ORF51833 - 7.7 6.0 11.7 8.6 5.9 11.7 1.0 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) GST_C PF00043.25 ORF49758 - 2.6e-08 34.0 0.0 3.1e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF49758 - 5.8e-07 29.4 0.1 7.2e-07 29.1 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF49758 - 3.2e-06 27.3 0.0 3.9e-06 27.0 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain DUF948 PF06103.11 ORF49478 - 0.0012 19.0 8.1 0.0014 18.8 8.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) SSP160 PF06933.11 ORF49478 - 3.7 5.6 17.6 5.1 5.2 17.6 1.3 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF4464 PF14713.6 ORF49463 - 0.26 10.8 0.0 0.28 10.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4464) DUF4226 PF10774.9 ORF49088 - 0.091 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4226) 2OG-FeII_Oxy_3 PF13640.6 ORF48666 - 3e-05 24.8 0.0 3.8e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-Fe_Oxy_2 PF10014.9 ORF48666 - 0.042 13.7 0.0 0.047 13.5 0.0 1.1 1 0 0 1 1 1 0 2OG-Fe dioxygenase 2OG-FeII_Oxy_5 PF13759.6 ORF48666 - 0.052 14.0 0.0 0.063 13.7 0.0 1.2 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase Oxygenase-NA PF09859.9 ORF48666 - 0.079 12.5 0.1 0.55 9.7 0.1 1.9 1 1 0 1 1 1 0 Oxygenase, catalysing oxidative methylation of damaged DNA MTCP1 PF08991.10 ORF48615 - 0.022 15.0 0.4 0.033 14.4 0.4 1.2 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type Carb_anhydrase PF00194.21 ORF48337 - 0.045 13.3 0.1 0.055 13.0 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic-type carbonic anhydrase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks299.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks299.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks299.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks299.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ank_2 PF12796.7 ORF75606 - 3.3e-73 242.3 16.5 1.2e-16 61.0 1.3 6.1 1 1 5 6 6 6 6 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF75606 - 1.2e-58 194.4 23.8 4.3e-09 36.5 0.0 11.2 1 1 11 12 12 12 12 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF75606 - 2.6e-56 187.3 15.7 1.3e-09 38.4 0.5 7.9 4 3 4 8 8 8 8 Ankyrin repeats (many copies) Ank PF00023.30 ORF75606 - 3.1e-53 176.0 30.3 0.00027 21.2 0.1 12.1 11 1 1 12 12 12 12 Ankyrin repeat Ank_3 PF13606.6 ORF75606 - 6.3e-49 158.3 14.2 0.0053 17.2 0.0 12.1 11 1 1 12 12 12 12 Ankyrin repeat Trp_halogenase PF04820.14 ORF75606 - 0.14 11.0 1.5 1.8 7.3 0.2 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Cyclin_N PF00134.23 ORF75606 - 0.16 11.7 2.5 76 3.1 0.0 5.1 3 3 3 7 7 7 0 Cyclin, N-terminal domain Mak_N_cap PF18085.1 ORF75606 - 0.99 10.5 5.2 1e+02 4.1 0.0 4.7 1 1 3 4 4 4 0 Maltokinase N-terminal cap domain S4 PF01479.25 ORF70317 - 0.001 18.8 0.0 0.0028 17.3 0.0 1.8 1 0 0 1 1 1 1 S4 domain PHD PF00628.29 ORF68898 - 7e-09 35.4 7.5 7e-09 35.4 7.5 3.4 5 0 0 5 5 5 1 PHD-finger Agenet PF05641.12 ORF68898 - 0.11 13.0 0.5 2.1 8.9 0.0 2.8 3 0 0 3 3 3 0 Agenet domain TMF_DNA_bd PF12329.8 ORF68551 - 1.4e-06 28.2 28.3 2e-05 24.5 5.2 4.8 3 2 1 4 4 3 2 TATA element modulatory factor 1 DNA binding ZapB PF06005.12 ORF68551 - 4.1e-06 27.1 26.3 0.0071 16.8 4.0 5.3 3 2 2 5 5 5 2 Cell division protein ZapB ATG16 PF08614.11 ORF68551 - 0.00034 20.9 31.6 0.043 14.0 6.3 3.8 2 2 2 4 4 4 3 Autophagy protein 16 (ATG16) ADIP PF11559.8 ORF68551 - 0.0013 18.8 31.7 0.024 14.7 15.7 3.6 1 1 1 3 3 3 2 Afadin- and alpha -actinin-Binding Syntaxin-6_N PF09177.11 ORF68551 - 0.0018 18.8 15.8 0.053 14.1 5.2 4.1 3 2 1 4 4 4 2 Syntaxin 6, N-terminal Fez1 PF06818.15 ORF68551 - 0.0021 18.5 22.7 0.19 12.2 3.6 3.4 1 1 2 3 3 3 2 Fez1 Cast PF10174.9 ORF68551 - 0.0023 16.3 25.7 0.028 12.7 0.2 2.8 1 1 1 2 2 2 2 RIM-binding protein of the cytomatrix active zone DUF3450 PF11932.8 ORF68551 - 0.003 16.9 2.9 0.003 16.9 2.9 3.4 2 1 1 3 3 3 2 Protein of unknown function (DUF3450) Spc7 PF08317.11 ORF68551 - 0.0044 15.9 31.7 0.24 10.2 15.1 3.8 1 1 2 3 3 3 2 Spc7 kinetochore protein Tropomyosin_1 PF12718.7 ORF68551 - 0.0064 16.7 31.9 0.024 14.8 0.6 4.3 2 2 2 4 4 4 1 Tropomyosin like KASH_CCD PF14662.6 ORF68551 - 0.016 15.0 34.3 0.17 11.7 7.2 4.0 1 1 3 4 4 4 0 Coiled-coil region of CCDC155 or KASH Filament PF00038.21 ORF68551 - 0.018 14.6 30.5 2.5 7.6 21.2 3.8 1 1 0 2 2 2 0 Intermediate filament protein CENP-F_leu_zip PF10473.9 ORF68551 - 0.018 15.0 29.9 0.49 10.4 0.3 4.9 2 2 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BCAS2 PF05700.11 ORF68551 - 0.022 14.4 1.4 0.022 14.4 1.4 3.3 4 0 0 4 4 4 0 Breast carcinoma amplified sequence 2 (BCAS2) FPP PF05911.11 ORF68551 - 0.022 13.0 23.4 0.16 10.2 2.5 2.7 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil GIT_CC PF16559.5 ORF68551 - 0.024 14.5 1.0 0.024 14.5 1.0 3.9 3 1 1 4 4 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor HAUS-augmin3 PF14932.6 ORF68551 - 0.027 14.1 20.7 0.028 14.0 9.5 3.1 2 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 UPF0242 PF06785.11 ORF68551 - 0.03 14.4 31.3 0.24 11.5 1.3 3.5 1 1 3 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF68551 - 0.05 12.9 22.3 1.1 8.5 7.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Spc42p PF11544.8 ORF68551 - 0.09 12.8 17.8 0.21 11.6 4.0 4.9 1 1 3 5 5 4 0 Spindle pole body component Spc42p Jnk-SapK_ap_N PF09744.9 ORF68551 - 0.092 13.0 23.9 0.071 13.3 11.6 3.4 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 PKcGMP_CC PF16808.5 ORF68551 - 0.12 12.3 0.1 0.12 12.3 0.1 5.5 6 0 0 6 6 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Atg14 PF10186.9 ORF68551 - 0.12 11.4 28.9 0.041 13.0 13.6 3.0 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5082 PF16888.5 ORF68551 - 0.14 12.4 22.2 2.6 8.3 7.6 4.4 3 2 1 4 4 4 0 Domain of unknown function (DUF5082) APG6_N PF17675.1 ORF68551 - 0.16 12.5 32.9 0.11 13.1 15.6 4.3 1 1 2 3 3 3 0 Apg6 coiled-coil region HIP1_clath_bdg PF16515.5 ORF68551 - 0.17 12.5 25.5 1.5 9.4 0.1 4.8 2 2 3 5 5 5 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Nup54 PF13874.6 ORF68551 - 0.18 11.9 21.0 0.79 9.8 0.2 3.0 3 1 0 4 4 2 0 Nucleoporin complex subunit 54 bZIP_1 PF00170.21 ORF68551 - 0.18 11.9 20.2 0.23 11.6 1.9 6.3 4 3 4 8 8 6 0 bZIP transcription factor YabA PF06156.13 ORF68551 - 0.18 12.4 23.9 9.7 6.9 13.0 5.3 1 1 3 4 4 4 0 Initiation control protein YabA DUF2125 PF09898.9 ORF68551 - 0.22 11.1 0.7 0.45 10.1 0.4 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2125) DivIC PF04977.15 ORF68551 - 0.26 11.1 28.7 0.078 12.8 3.0 5.6 3 2 2 5 5 5 0 Septum formation initiator DUF4349 PF14257.6 ORF68551 - 0.36 10.2 20.1 3.2 7.2 0.1 4.6 3 2 1 4 4 4 0 Domain of unknown function (DUF4349) DASH_Dam1 PF08653.10 ORF68551 - 0.39 10.6 6.4 1.3 8.8 0.3 4.2 3 1 1 4 4 4 0 DASH complex subunit Dam1 FlaC_arch PF05377.11 ORF68551 - 0.42 11.0 21.9 0.81 10.1 0.2 6.2 5 3 3 8 8 7 0 Flagella accessory protein C (FlaC) Utp12 PF04003.12 ORF68551 - 0.54 10.6 4.4 1.1 9.6 0.1 3.1 3 0 0 3 3 2 0 Dip2/Utp12 Family Sec2p PF06428.11 ORF68551 - 0.67 10.0 22.5 0.56 10.2 1.7 5.3 4 1 1 5 5 5 0 GDP/GTP exchange factor Sec2p DUF390 PF04094.14 ORF68551 - 0.75 8.0 15.8 1.1 7.4 15.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF390) ABC_tran_CTD PF16326.5 ORF68551 - 0.75 10.1 23.6 0.89 9.9 0.6 5.2 4 2 1 5 5 4 0 ABC transporter C-terminal domain FlgM PF04316.13 ORF68551 - 0.84 10.0 0.1 0.84 10.0 0.1 3.1 3 1 0 3 3 2 0 Anti-sigma-28 factor, FlgM USP8_interact PF08941.10 ORF68551 - 0.87 9.4 12.5 21 4.9 8.4 3.5 3 1 1 4 4 4 0 USP8 interacting PI3K_P85_iSH2 PF16454.5 ORF68551 - 0.92 9.1 23.6 0.17 11.5 10.7 4.1 1 1 3 4 4 4 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Lipoprotein_20 PF13942.6 ORF68551 - 1.2 9.1 11.8 0.14 12.1 4.0 2.9 2 1 1 3 3 3 0 YfhG lipoprotein DUF724 PF05266.14 ORF68551 - 1.5 8.7 19.9 1.1 9.1 8.7 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF724) Laminin_II PF06009.12 ORF68551 - 2 8.4 20.9 1.1 9.3 0.2 4.0 2 2 2 4 4 4 0 Laminin Domain II Fib_alpha PF08702.10 ORF68551 - 2.2 8.5 25.4 1.3 9.2 0.5 4.4 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 ORF68551 - 2.6 8.1 20.2 3.9 7.5 0.5 4.6 1 1 5 6 6 6 0 Protein of unknown function (DUF1664) SHE3 PF17078.5 ORF68551 - 2.6 7.7 29.7 0.094 12.4 4.4 4.0 1 1 3 4 4 4 0 SWI5-dependent HO expression protein 3 SlyX PF04102.12 ORF68551 - 2.9 8.6 26.0 13 6.5 0.5 5.8 4 2 2 6 6 5 0 SlyX Lebercilin PF15619.6 ORF68551 - 3.1 7.4 36.5 1.5 8.4 6.3 3.9 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease Herpes_UL6 PF01763.16 ORF68551 - 3.3 6.1 14.4 0.1 11.1 7.1 2.1 2 1 0 2 2 2 0 Herpesvirus UL6 like DUF948 PF06103.11 ORF68551 - 3.5 8.0 11.8 8.3 6.7 5.6 3.7 4 1 0 4 4 2 0 Bacterial protein of unknown function (DUF948) T2SSF PF00482.23 ORF68551 - 3.8 7.5 5.9 5.3 7.0 1.2 2.9 3 1 0 3 3 2 0 Type II secretion system (T2SS), protein F Csm1_N PF18504.1 ORF68551 - 4.3 7.7 26.0 0.25 11.7 0.6 5.2 3 3 2 5 5 4 0 Csm1 N-terminal domain Troponin PF00992.20 ORF68551 - 4.5 7.6 24.0 0.78 10.0 9.6 3.5 3 1 0 3 3 3 0 Troponin BLOC1_2 PF10046.9 ORF68551 - 4.8 7.6 17.8 1.9 8.8 1.3 4.2 2 1 2 4 4 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 PRKG1_interact PF15898.5 ORF68551 - 5.2 8.0 28.2 28 5.7 0.9 4.7 1 1 4 5 5 5 0 cGMP-dependent protein kinase interacting domain CENP-Q PF13094.6 ORF68551 - 5.6 7.1 29.6 4.4 7.5 1.5 3.9 2 2 1 3 3 3 0 CENP-Q, a CENPA-CAD centromere complex subunit Cnn_1N PF07989.11 ORF68551 - 7.5 6.8 25.5 6.3 7.0 10.9 4.6 3 2 1 4 4 4 0 Centrosomin N-terminal motif 1 SPAM PF02090.15 ORF68551 - 8.8 6.1 18.1 0.2 11.4 9.2 2.7 3 0 0 3 3 3 0 Salmonella surface presentation of antigen gene type M protein Phage_integrase PF00589.22 ORF68430 - 0.0062 16.3 0.1 0.022 14.6 0.1 1.8 1 1 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 ORF68430 - 0.076 13.3 0.3 0.43 10.9 0.0 2.3 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 ORF68430 - 0.13 12.7 0.1 0.54 10.8 0.0 2.0 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain RicinB_lectin_2 PF14200.6 ORF63262 - 1.7e-05 25.4 3.7 0.054 14.2 0.8 3.5 2 2 1 3 3 3 3 Ricin-type beta-trefoil lectin domain-like Fascin PF06268.13 ORF63262 - 0.05 13.8 0.0 5.7 7.2 0.0 2.4 2 1 0 2 2 2 0 Fascin domain FGF PF00167.18 ORF63262 - 0.14 12.3 0.0 15 5.7 0.0 2.6 3 0 0 3 3 3 0 Fibroblast growth factor Sulfotransfer_1 PF00685.27 ORF61624 - 8.2e-17 61.6 1.0 1e-15 58.0 1.0 2.2 1 1 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF61624 - 8.4e-10 39.4 0.1 4.9e-09 36.9 0.1 2.1 1 1 0 1 1 1 1 Sulfotransferase family PRP9_N PF16958.5 ORF61624 - 0.61 10.1 5.0 1.3 9.1 4.3 1.9 1 1 0 1 1 1 0 Pre-mRNA-splicing factor PRP9 N-terminus Trp_Tyr_perm PF03222.13 ORF6070 - 7.8e-137 456.5 30.0 6.2e-136 453.5 18.5 2.0 1 1 1 2 2 2 2 Tryptophan/tyrosine permease family Abhydrolase_9_N PF15420.6 ORF6070 - 7.7 6.5 11.3 20 5.1 3.3 3.2 2 1 1 3 3 3 0 Alpha/beta-hydrolase family N-terminus Abhydrolase_2 PF02230.16 ORF58821 - 0.00035 20.4 0.0 0.017 15.0 0.0 2.2 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF58821 - 0.0015 19.2 1.5 0.0057 17.3 1.5 2.0 1 1 0 1 1 1 1 Alpha/beta hydrolase family DUF2249 PF10006.9 ORF58821 - 0.029 14.2 0.0 16 5.4 0.0 2.9 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2249) Cutinase PF01083.22 ORF58821 - 0.063 13.2 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Cutinase Ank_5 PF13857.6 ORF58672 - 4.1e-16 58.8 6.6 7.7e-09 35.6 0.1 3.6 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF58672 - 4.3e-16 59.1 1.3 1.1e-09 38.6 0.2 4.3 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF58672 - 5.1e-16 59.0 0.4 6.2e-10 39.5 0.2 2.7 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF58672 - 8.9e-15 54.4 9.4 0.00021 21.6 0.0 4.0 4 0 0 4 4 3 3 Ankyrin repeat zf-RING_2 PF13639.6 ORF58672 - 4.5e-10 39.7 4.8 4.5e-10 39.7 4.8 2.1 2 0 0 2 2 1 1 Ring finger domain Ank_3 PF13606.6 ORF58672 - 8.9e-10 38.0 2.9 0.023 15.2 0.2 3.9 3 0 0 3 3 3 3 Ankyrin repeat zf-RING_11 PF17123.5 ORF58672 - 1.3e-08 34.4 2.7 1.3e-08 34.4 2.7 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF58672 - 6.1e-08 32.4 3.1 1.9e-07 30.9 3.1 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF58672 - 4e-06 26.6 4.0 9.2e-06 25.4 4.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF58672 - 0.00013 22.2 6.4 0.00013 22.2 6.4 2.8 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF58672 - 0.00027 20.9 1.7 0.00027 20.9 1.7 2.4 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF58672 - 0.002 18.1 7.1 0.0051 16.7 7.1 1.8 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF58672 - 0.004 17.2 4.2 0.02 14.9 4.2 2.1 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING-like PF08746.11 ORF58672 - 0.0068 16.7 3.6 0.021 15.1 3.6 1.9 1 0 0 1 1 1 1 RING-like domain RINGv PF12906.7 ORF58672 - 0.077 13.1 2.3 0.32 11.2 2.3 2.1 1 1 0 1 1 1 0 RING-variant domain zf-C3HC4_3 PF13920.6 ORF58672 - 0.15 11.9 6.0 0.35 10.7 6.0 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF58672 - 0.16 11.6 6.4 0.34 10.6 6.4 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF58672 - 1.6 8.9 6.9 7.4 6.8 6.9 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain Sugar_tr PF00083.24 ORF49508 - 1.4e-21 76.9 16.9 1.7e-21 76.6 16.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF49508 - 3.3e-16 59.2 30.7 3.3e-16 59.2 30.7 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Cation_ATPase_C PF00689.21 ORF49508 - 0.65 9.7 16.3 0.091 12.5 0.9 3.5 3 1 0 3 3 3 0 Cation transporting ATPase, C-terminus DUF2304 PF10066.9 ORF49508 - 6 7.1 8.8 8.5 6.7 3.7 3.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2304) DUF2321 PF10083.9 ORF43469 - 2 8.0 7.3 0.6 9.7 0.6 2.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) DUF3459 PF11941.8 ORF43232 - 6.5e-08 32.8 0.0 1.6e-07 31.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Alpha-amylase_C PF02806.18 ORF43232 - 3e-07 30.8 0.0 5.6e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 ORF43232 - 0.00018 21.2 0.0 0.00046 19.9 0.0 1.6 2 0 0 2 2 2 1 Alpha amylase, catalytic domain Ion_trans PF00520.31 ORF40226 - 1.4e-06 27.7 0.8 2.3e-06 27.0 0.8 1.3 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF40226 - 0.0059 15.3 0.6 0.0078 14.9 0.6 1.2 1 0 0 1 1 1 1 Polycystin cation channel BUD22 PF09073.10 ORF40226 - 0.027 13.8 16.8 0.038 13.3 16.8 1.2 1 0 0 1 1 1 0 BUD22 DUF2418 PF10332.9 ORF40226 - 0.045 14.3 1.5 1.3 9.6 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2418) RRM_1 PF00076.22 ORF3213 - 5.5e-66 218.3 0.0 1.3e-17 63.3 0.0 4.1 4 0 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF3213 - 2.7e-09 37.0 0.1 0.65 10.1 0.0 4.4 4 0 0 4 4 4 4 RNA binding motif RRM_occluded PF16842.5 ORF3213 - 1.6e-08 34.3 0.0 0.16 11.9 0.0 4.0 4 0 0 4 4 4 3 Occluded RNA-recognition motif Limkain-b1 PF11608.8 ORF3213 - 3.4e-08 33.4 2.2 0.076 13.1 0.1 4.5 4 2 0 4 4 4 2 Limkain b1 SPOR PF05036.13 ORF3213 - 0.00012 22.4 6.4 0.15 12.5 0.6 5.0 4 2 2 6 6 6 2 Sporulation related domain RRM_7 PF16367.5 ORF3213 - 0.00068 19.7 0.0 1.9 8.7 0.0 3.4 3 0 0 3 3 3 1 RNA recognition motif YflT PF11181.8 ORF3213 - 0.024 15.2 0.7 16 6.1 0.0 3.2 3 1 0 3 3 3 0 Heat induced stress protein YflT GHMP_kinases_C PF08544.13 ORF3213 - 0.039 14.3 1.2 0.16 12.4 0.1 2.5 3 0 0 3 3 3 0 GHMP kinases C terminal RRM_5 PF13893.6 ORF3213 - 0.045 13.4 0.0 23 4.6 0.0 3.3 3 0 0 3 3 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ATP-grasp_2 PF08442.10 ORF3213 - 0.066 12.8 0.4 0.81 9.2 0.2 2.2 1 1 1 2 2 2 0 ATP-grasp domain AAA PF00004.29 ORF32128 - 3.6e-45 153.6 0.1 1.3e-44 151.8 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 ORF32128 - 1.1e-10 41.3 0.1 8.3e-10 38.5 0.0 2.3 2 0 0 2 2 2 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 ORF32128 - 3.7e-09 36.2 0.0 1.1e-08 34.8 0.0 1.8 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 ORF32128 - 4.8e-08 33.3 0.4 1.1e-07 32.1 0.0 1.8 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 ORF32128 - 7.2e-08 32.5 0.2 2.5e-07 30.8 0.2 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF32128 - 2.8e-06 27.8 0.1 0.00039 20.8 0.0 2.8 2 1 1 3 3 3 1 AAA ATPase domain DUF815 PF05673.13 ORF32128 - 6.9e-06 25.4 0.1 2.9e-05 23.4 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF815) RuvB_N PF05496.12 ORF32128 - 3.3e-05 23.7 0.0 9.5e-05 22.2 0.0 1.8 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF32128 - 5.7e-05 23.4 2.9 0.0018 18.5 0.0 2.9 2 1 1 3 3 2 1 AAA domain AAA_18 PF13238.6 ORF32128 - 0.00012 22.6 0.0 0.00028 21.4 0.0 1.7 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF32128 - 0.0003 21.1 0.0 0.0007 20.0 0.0 1.6 1 0 0 1 1 1 1 RNA helicase AAA_28 PF13521.6 ORF32128 - 0.00048 20.4 0.0 0.0022 18.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF32128 - 0.00094 18.6 1.1 0.0031 16.9 0.0 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 ORF32128 - 0.0013 18.5 0.0 0.0028 17.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein NTPase_1 PF03266.15 ORF32128 - 0.0014 18.6 0.0 0.15 12.0 0.0 2.9 3 0 0 3 3 3 1 NTPase AAA_33 PF13671.6 ORF32128 - 0.0024 18.1 0.0 0.0053 16.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 ORF32128 - 0.0032 16.7 0.0 0.013 14.8 0.0 2.0 2 0 0 2 2 2 1 TIP49 P-loop domain TsaE PF02367.17 ORF32128 - 0.0037 17.3 0.0 0.0077 16.2 0.0 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 ORF32128 - 0.0073 16.0 0.2 0.017 14.9 0.1 1.7 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 ORF32128 - 0.0087 16.0 0.4 0.12 12.3 0.1 2.6 3 0 0 3 3 3 1 NACHT domain AAA_14 PF13173.6 ORF32128 - 0.01 15.8 0.1 0.04 13.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 ORF32128 - 0.016 15.0 0.9 0.077 12.7 0.0 2.5 3 1 0 3 3 2 0 Sigma-54 interaction domain AAA_3 PF07726.11 ORF32128 - 0.017 15.0 0.1 0.088 12.7 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 ORF32128 - 0.02 14.4 0.1 0.053 13.0 0.1 1.7 1 1 0 1 1 1 0 P-loop containing dynein motor region Parvo_NS1 PF01057.17 ORF32128 - 0.02 14.0 0.0 0.045 12.8 0.0 1.5 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 ORF32128 - 0.029 13.9 0.4 0.12 11.9 0.1 1.9 1 1 1 2 2 2 0 AAA domain AAA_30 PF13604.6 ORF32128 - 0.038 13.7 0.3 0.15 11.8 0.3 2.1 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 ORF32128 - 0.045 13.2 0.0 0.91 8.9 0.0 2.6 3 0 0 3 3 2 0 Bacterial TniB protein AAA_11 PF13086.6 ORF32128 - 0.058 13.2 0.1 0.19 11.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF32128 - 0.069 12.6 0.0 0.2 11.1 0.0 1.7 1 0 0 1 1 1 0 PhoH-like protein NB-ARC PF00931.22 ORF32128 - 0.08 12.1 0.0 0.29 10.3 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain ATPase_2 PF01637.18 ORF32128 - 0.089 12.7 0.4 0.41 10.5 0.0 2.3 2 1 0 2 2 1 0 ATPase domain predominantly from Archaea AAA_17 PF13207.6 ORF32128 - 0.093 13.2 0.1 0.34 11.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF32128 - 0.14 12.7 0.3 0.49 10.9 0.0 2.3 2 2 0 2 2 2 0 ABC transporter ATPase PF06745.13 ORF32128 - 0.15 11.4 2.3 0.51 9.7 0.0 2.6 3 0 0 3 3 3 0 KaiC HIP1_clath_bdg PF16515.5 ORF32128 - 0.3 11.7 3.8 1.9 9.2 2.9 2.3 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DnaJ PF00226.31 ORF30700 - 1.1e-19 70.3 0.2 1.9e-19 69.5 0.2 1.4 1 0 0 1 1 1 1 DnaJ domain Beta_helix PF13229.6 ORF30700 - 3.3e-09 36.8 0.6 1e-08 35.2 0.6 1.7 1 1 0 1 1 1 1 Right handed beta helix region WW PF00397.26 ORF30700 - 7.3e-06 26.0 0.1 1.7e-05 24.8 0.1 1.7 1 0 0 1 1 1 1 WW domain Pectate_lyase_3 PF12708.7 ORF30700 - 0.00093 19.1 0.0 0.0014 18.5 0.0 1.2 1 0 0 1 1 1 1 Pectate lyase superfamily protein DUF4957 PF16318.5 ORF30700 - 0.027 14.4 0.0 0.051 13.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) DNA_methylase PF00145.17 ORF29675 - 6.8e-14 52.0 0.0 1.4e-13 51.0 0.0 1.4 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase HA2 PF04408.23 ORF26970 - 5.7e-24 84.5 0.0 1.7e-23 83.0 0.0 1.8 2 0 0 2 2 2 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 ORF26970 - 2.8e-05 24.4 0.0 5.2e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold ATG16 PF08614.11 ORF24712 - 2.5 8.3 49.3 0.12 12.5 3.3 3.9 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) GAS PF13851.6 ORF24712 - 7.9 5.8 42.8 1.3 8.4 1.1 4.2 1 1 4 5 5 5 0 Growth-arrest specific micro-tubule binding MFS_1 PF07690.16 ORF24300 - 2e-39 135.5 45.6 2e-39 135.5 45.6 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily TRI12 PF06609.13 ORF24300 - 3.1e-06 25.9 4.2 3.1e-06 25.9 4.2 1.7 2 0 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) MFS_3 PF05977.13 ORF24300 - 3.2e-06 25.8 5.6 3.2e-06 25.8 5.6 1.9 1 1 0 2 2 2 1 Transmembrane secretion effector DUF2530 PF10745.9 ORF24300 - 0.0097 16.1 1.0 0.0097 16.1 1.0 3.4 3 1 0 3 3 3 1 Protein of unknown function (DUF2530) DZR PF12773.7 ORF23120 - 7.9e-06 25.8 3.8 6.4e-05 22.9 2.9 2.2 2 0 0 2 2 2 1 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF23120 - 2.6e-05 23.5 4.1 2.6e-05 23.5 4.1 2.5 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 ORF23120 - 7.8e-05 22.3 5.5 0.00017 21.2 5.5 1.6 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 ORF23120 - 0.016 15.9 2.1 0.026 15.3 0.5 2.0 2 0 0 2 2 2 0 zinc-ribbon family DUF2353 PF09789.9 ORF23120 - 0.037 13.4 0.6 0.053 12.9 0.6 1.1 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) HypA PF01155.19 ORF23120 - 0.13 12.3 0.5 2.4 8.2 0.3 2.5 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Spc7 PF08317.11 ORF23120 - 0.18 10.6 5.9 0.26 10.2 5.9 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4618 PF15397.6 ORF23120 - 0.2 11.0 4.6 0.45 9.9 4.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Spc24 PF08286.11 ORF23120 - 0.23 11.7 3.6 8.8 6.6 0.1 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF1387 PF07139.11 ORF23120 - 0.29 10.8 2.5 0.47 10.2 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1387) DivIC PF04977.15 ORF23120 - 0.3 10.9 7.7 0.49 10.2 0.4 2.3 1 1 1 2 2 2 0 Septum formation initiator Troponin PF00992.20 ORF23120 - 0.37 11.1 3.7 0.77 10.1 3.7 1.5 1 0 0 1 1 1 0 Troponin CENP-F_leu_zip PF10473.9 ORF23120 - 0.41 10.7 8.1 3.8 7.5 8.2 2.0 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HALZ PF02183.18 ORF23120 - 0.7 10.2 8.3 7.2 6.9 0.3 3.1 3 1 0 3 3 2 0 Homeobox associated leucine zipper TelA PF05816.11 ORF23120 - 0.81 8.7 4.4 1.1 8.2 4.4 1.1 1 0 0 1 1 1 0 Toxic anion resistance protein (TelA) M PF02370.16 ORF23120 - 0.84 10.4 5.4 1.3 9.9 0.7 3.1 2 1 1 3 3 3 0 M protein repeat ERM PF00769.19 ORF23120 - 1.1 9.0 9.2 1.6 8.5 9.2 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Phasin_2 PF09361.10 ORF23120 - 1.2 9.4 5.8 0.38 11.1 1.0 2.1 2 0 0 2 2 2 0 Phasin protein ZapB PF06005.12 ORF23120 - 1.4 9.4 11.1 3.9 8.0 7.6 2.2 1 1 1 2 2 2 0 Cell division protein ZapB JAKMIP_CC3 PF16034.5 ORF23120 - 1.9 8.4 10.0 11 5.9 10.1 1.9 1 1 0 1 1 1 0 JAKMIP CC3 domain DUF1843 PF08898.10 ORF23120 - 2.6 8.6 7.8 0.39 11.3 1.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1843) APG6_N PF17675.1 ORF23120 - 2.9 8.4 11.3 5.2 7.6 11.3 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF4200 PF13863.6 ORF23120 - 3.5 8.0 9.0 9.3 6.7 9.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) GAS PF13851.6 ORF23120 - 5.6 6.3 8.3 6.9 6.0 1.3 2.1 1 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Nudix_N_2 PF14803.6 ORF23120 - 6.7 6.7 11.0 4.3 7.3 0.1 3.4 3 0 0 3 3 3 0 Nudix N-terminal MFS_1 PF07690.16 ORF23057 - 2e-10 40.2 24.2 2e-10 40.2 24.2 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily ParA PF10609.9 ORF18677 - 1.1e-78 264.1 0.1 1.4e-78 263.7 0.1 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase DUF971 PF06155.12 ORF18677 - 8.2e-12 45.6 0.0 1.5e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF971) CbiA PF01656.23 ORF18677 - 3.2e-11 43.4 0.0 7.1e-11 42.3 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 ORF18677 - 4.9e-09 36.3 1.2 2.8e-06 27.4 0.2 2.2 2 0 0 2 2 2 2 AAA domain MipZ PF09140.11 ORF18677 - 1.9e-05 24.1 1.0 0.00022 20.6 1.3 2.3 2 1 0 2 2 2 1 ATPase MipZ ArsA_ATPase PF02374.15 ORF18677 - 0.00066 19.0 2.6 0.016 14.4 0.4 2.5 2 1 1 3 3 3 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 ORF18677 - 0.0015 18.1 0.5 0.27 10.7 0.1 2.2 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ CLP1_P PF16575.5 ORF18677 - 0.014 15.2 0.0 0.033 14.0 0.0 1.6 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Fer4_NifH PF00142.18 ORF18677 - 0.073 12.5 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Zn-ribbon_8 PF09723.10 ORF18677 - 0.14 12.3 0.2 0.26 11.4 0.2 1.4 1 0 0 1 1 1 0 Zinc ribbon domain AAA_25 PF13481.6 ORF18677 - 0.2 11.2 0.8 0.95 9.0 0.2 2.2 2 0 0 2 2 2 0 AAA domain MFS_1 PF07690.16 ORF15524 - 1e-34 120.0 55.8 6.5e-24 84.5 25.9 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF15524 - 2.1e-12 46.6 15.8 2.1e-12 46.6 15.8 2.6 2 1 0 3 3 3 1 Sugar (and other) transporter MFS_4 PF06779.14 ORF15524 - 8.7e-08 31.8 38.2 4.5e-07 29.5 38.2 2.0 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB OATP PF03137.20 ORF15524 - 0.00012 20.5 4.1 0.00012 20.5 4.1 2.3 3 0 0 3 3 3 1 Organic Anion Transporter Polypeptide (OATP) family cNMP_binding PF00027.29 ORF14119 - 2.1e-30 104.6 0.0 2.6e-17 62.7 0.0 2.4 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain DUF3459 PF11941.8 ORF107213 - 6.5e-08 32.8 0.0 1.6e-07 31.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Alpha-amylase_C PF02806.18 ORF107213 - 3e-07 30.8 0.0 5.6e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 ORF107213 - 0.00018 21.2 0.0 0.00046 19.9 0.0 1.6 2 0 0 2 2 2 1 Alpha amylase, catalytic domain RRM_1 PF00076.22 ORF104618 - 2.9e-28 97.5 4.7 2.3e-15 56.2 0.7 2.9 2 1 1 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF104618 - 4.4e-08 33.1 0.4 0.00018 21.5 0.1 3.0 2 1 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 ORF104618 - 0.029 14.3 0.2 6.3 6.9 0.0 2.4 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif EF-hand_7 PF13499.6 ORF101751 - 0.0052 17.2 0.1 1.3 9.5 0.0 3.0 2 0 0 2 2 2 2 EF-hand domain pair DUF685 PF05085.12 ORF101751 - 0.085 12.2 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF685) S4 PF01479.25 ORF101648 - 0.001 18.8 0.0 0.0028 17.3 0.0 1.8 1 0 0 1 1 1 1 S4 domain DUF2703 PF10865.8 NODE_14233_length_1178_cov_114.394576_g10695_i0forward_frame_1 - 0.066 13.4 1.0 0.11 12.7 1.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) Collectrin PF16959.5 NODE_14233_length_1178_cov_114.394576_g10695_i0forward_frame_1 - 1 9.1 5.7 3.3 7.5 3.5 2.6 2 1 0 2 2 2 0 Renal amino acid transporter Sec62 PF03839.16 NODE_14148_length_1181_cov_229.898778_g9615_i1reverse_frame_3 - 0.27 10.7 2.9 0.47 9.9 2.9 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 DUF724 PF05266.14 NODE_14148_length_1181_cov_229.898778_g9615_i1forward_frame_2 - 0.16 11.8 11.1 0.16 11.8 6.9 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF2205 PF10224.9 NODE_14148_length_1181_cov_229.898778_g9615_i1forward_frame_2 - 0.18 11.8 8.2 0.25 11.4 4.0 2.6 2 0 0 2 2 2 0 Short coiled-coil protein gerPA PF10676.9 NODE_14148_length_1181_cov_229.898778_g9615_i1forward_frame_2 - 1.1 9.5 5.0 8.7 6.7 2.9 3.1 2 1 1 3 3 3 0 Spore germination protein gerPA/gerPF Phasin PF05597.11 NODE_14148_length_1181_cov_229.898778_g9615_i1forward_frame_2 - 5.1 7.1 11.6 0.28 11.2 1.0 2.5 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) AAA_9 PF12781.7 ORF97810 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region Symplekin_C PF12295.8 ORF97660 - 1.9e-18 67.2 0.8 8e-13 48.9 0.0 2.7 2 1 1 3 3 3 2 Symplekin tight junction protein C terminal Alpha-amylase PF00128.24 ORF92140 - 1.7e-48 166.0 1.7 6.8e-48 163.9 1.7 1.8 1 1 0 1 1 1 1 Alpha amylase, catalytic domain SH3_13 PF18335.1 ORF92140 - 0.022 14.6 0.0 0.17 11.7 0.0 2.3 2 0 0 2 2 2 0 ATP-dependent RecD-like DNA helicase SH3 domain TRM PF02005.16 ORF91748 - 1.6e-14 53.9 0.0 6e-14 52.0 0.0 1.7 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase ANAPC4_WD40 PF12894.7 ORF91002 - 0.0015 18.8 0.0 0.004 17.4 0.0 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain TIR_3 PF18567.1 ORF91002 - 0.093 12.7 1.4 0.14 12.2 0.4 1.8 2 0 0 2 2 2 0 Toll/interleukin-1 receptor domain gpUL132 PF11359.8 ORF91002 - 0.1 12.1 3.0 0.11 12.1 0.8 2.0 2 0 0 2 2 2 0 Glycoprotein UL132 RRM_1 PF00076.22 ORF89000 - 6.1e-15 54.8 0.1 7.1e-07 29.0 0.0 3.4 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF89000 - 0.0053 16.8 0.0 0.011 15.9 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif SET_assoc PF11767.8 ORF89000 - 0.15 11.7 0.0 0.32 10.6 0.0 1.6 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated Peptidase_S49_N PF08496.10 ORF89000 - 1.7 8.7 7.8 0.65 10.1 2.5 2.5 2 0 0 2 2 2 0 Peptidase family S49 N-terminal RCC1_2 PF13540.6 ORF88045 - 5.7e-18 64.2 27.1 0.19 11.6 0.0 9.3 9 0 0 9 9 9 9 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF88045 - 1.5e-09 38.2 4.1 9.7 6.2 0.1 8.1 8 1 0 8 8 8 1 Uncharacterised ACR, YagE family COG1723 FtsQ PF03799.15 ORF88045 - 9.1e-06 26.5 0.1 11 6.8 0.0 6.0 1 1 5 7 7 7 1 Cell division protein FtsQ XRCC1_N PF01834.16 ORF88045 - 0.003 17.6 2.0 39 4.2 0.0 5.3 1 1 5 7 7 7 0 XRCC1 N terminal domain Spectrin PF00435.21 ORF88045 - 0.0041 17.6 0.0 33 5.0 0.0 5.6 6 1 1 7 7 7 0 Spectrin repeat Flavodoxin_3 PF12641.7 ORF88045 - 0.0087 15.8 0.0 39 3.9 0.0 4.7 2 2 4 6 6 6 0 Flavodoxin domain bPH_2 PF03703.14 ORF88045 - 0.025 14.8 0.2 7.7 6.8 0.0 3.4 3 0 0 3 3 3 0 Bacterial PH domain zinc_ribbon_13 PF09855.9 ORF88045 - 0.037 14.2 0.6 34 4.7 0.0 4.4 5 0 0 5 5 5 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) DNA_ligase_A_C PF04679.15 ORF88045 - 0.039 14.5 0.1 9.7 6.9 0.0 3.4 2 2 0 3 3 3 0 ATP dependent DNA ligase C terminal region Methyltransf_29 PF03141.16 ORF88045 - 0.049 12.2 3.4 7.9 4.9 0.0 4.0 6 1 1 7 7 7 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Helicase_C PF00271.31 ORF87641 - 1.7e-18 67.0 0.1 2.8e-18 66.3 0.1 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain MMPL PF03176.15 ORF86943 - 3e-22 79.0 8.5 1.1e-21 77.2 8.5 1.8 1 1 0 1 1 1 1 MMPL family Sterol-sensing PF12349.8 ORF86943 - 0.082 12.7 5.2 0.09 12.6 3.9 1.7 1 1 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation Patched PF02460.18 ORF86943 - 1.8 6.5 8.6 0.86 7.6 5.7 1.8 2 1 0 2 2 2 0 Patched family Lipase_GDSL_2 PF13472.6 ORF84508 - 1.1e-05 25.9 0.0 6e-05 23.5 0.0 2.0 2 0 0 2 2 2 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 ORF84508 - 0.054 13.5 0.0 0.12 12.3 0.0 1.6 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase AAA_9 PF12781.7 ORF78586 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region S-AdoMet_synt_C PF02773.16 ORF78017 - 1.7e-63 212.7 0.1 4.9e-63 211.2 0.0 1.8 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 ORF78017 - 6.4e-40 136.1 0.0 1.3e-39 135.1 0.0 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 ORF78017 - 5.1e-32 110.5 0.1 1.3e-31 109.2 0.0 1.7 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 ORF78017 - 0.083 11.7 0.7 0.27 10.0 0.1 1.9 1 1 1 2 2 2 0 S-adenosylmethionine synthetase (AdoMet synthetase) CPSase_C PF18302.1 ORF7717 - 0.38 11.3 1.3 1.1 9.9 1.3 1.8 1 0 0 1 1 1 0 Carbamoyl phosphate synthetase C-terminal domain DSPn PF14671.6 ORF75253 - 2.1e-47 161.1 0.7 4.2e-47 160.1 0.7 1.5 1 0 0 1 1 1 1 Dual specificity protein phosphatase, N-terminal half DSPc PF00782.20 ORF75253 - 1.1e-11 44.7 0.0 2.2e-10 40.5 0.0 2.4 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF75253 - 0.0015 18.2 0.0 0.003 17.1 0.0 1.5 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF75253 - 0.0021 18.2 0.0 0.0039 17.3 0.0 1.3 1 0 0 1 1 1 1 Inositol hexakisphosphate AAA_9 PF12781.7 ORF53956 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region AAA_9 PF12781.7 ORF50023 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region AAA_9 PF12781.7 ORF49797 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region AAA_9 PF12781.7 ORF42132 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region AAA_9 PF12781.7 ORF33922 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region MFS_1 PF07690.16 ORF33169 - 1.5e-23 83.3 46.4 1.5e-23 83.3 46.4 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF33169 - 2.6e-08 33.5 37.6 4e-08 32.9 37.6 1.4 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Sugar_tr PF00083.24 ORF33169 - 5.8e-06 25.4 31.1 4.1e-05 22.6 13.2 2.1 1 1 1 2 2 2 2 Sugar (and other) transporter DUF3392 PF11872.8 ORF33169 - 1.5 9.1 12.1 2.8 8.2 1.7 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3392) tRNA-synt_1b PF00579.25 ORF29733 - 6.9e-61 206.1 0.0 9.5e-61 205.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) SKIP_SNW PF02731.15 ORF21989 - 1.1e-67 226.7 1.7 1.1e-67 226.7 1.7 2.0 2 0 0 2 2 2 1 SKIP/SNW domain FBPase PF00316.20 ORF21428 - 4.8e-85 283.8 0.2 6.2e-85 283.4 0.2 1.1 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain DUF4549 PF15082.6 ORF21076 - 0.02 14.7 1.1 0.073 12.9 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4549) AAA_9 PF12781.7 ORF19668 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region AIRS_C PF02769.22 ORF15676 - 1.5e-23 83.7 1.5 6.7e-23 81.5 1.5 2.0 1 1 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF15676 - 2.2e-20 73.1 0.2 6.1e-20 71.7 0.2 1.8 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AAA_9 PF12781.7 ORF12352 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region LrgB PF04172.16 ORF109370 - 1.6e-31 109.5 6.1 1.6e-31 109.5 6.1 2.1 2 0 0 2 2 2 1 LrgB-like family BPD_transp_2 PF02653.16 ORF106271 - 1.1e-49 169.0 41.5 1.1e-49 169.0 41.5 2.0 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component AAA_9 PF12781.7 ORF100242 - 2.6e-82 275.2 6.4 3.3e-82 274.9 6.4 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region TOH_N PF12549.8 NODE_14287_length_1176_cov_279.931639_g10738_i0reverse_frame_1 - 0.051 13.4 1.2 13 5.8 0.0 4.3 4 0 0 4 4 4 0 Tyrosine hydroxylase N terminal CARD_2 PF16739.5 NODE_14287_length_1176_cov_279.931639_g10738_i0reverse_frame_1 - 0.099 12.6 0.8 22 5.1 0.1 3.0 2 0 0 2 2 2 0 Caspase recruitment domain HalX PF08663.10 NODE_14287_length_1176_cov_279.931639_g10738_i0reverse_frame_1 - 0.38 11.1 48.4 15 6.0 0.3 9.2 7 4 2 9 9 9 0 HalX domain RTTN_N PF14726.6 NODE_14287_length_1176_cov_279.931639_g10738_i0reverse_frame_1 - 0.43 11.4 6.7 58 4.6 0.2 3.6 2 1 0 3 3 3 0 Rotatin, an armadillo repeat protein, centriole functioning FNIP PF05725.12 NODE_14287_length_1176_cov_279.931639_g10738_i0forward_frame_1 - 1.1e-62 207.9 38.8 6.9e-12 45.3 0.2 6.8 5 2 2 7 7 7 7 FNIP Repeat LRR_5 PF13306.6 NODE_14287_length_1176_cov_279.931639_g10738_i0forward_frame_1 - 0.0015 18.5 3.6 0.2 11.6 0.3 3.2 2 1 1 3 3 3 2 BspA type Leucine rich repeat region (6 copies) W_rich_C PF07483.11 NODE_14287_length_1176_cov_279.931639_g10738_i0forward_frame_1 - 4 7.7 9.2 1e+02 3.1 0.1 5.2 3 3 3 7 7 7 0 Tryptophan-rich Synechocystis species C-terminal domain PMP1_2 PF08114.11 NODE_14233_length_1178_cov_114.394576_g10695_i0reverse_frame_3 - 3.3 7.5 7.4 8.7 6.2 0.5 2.4 2 0 0 2 2 2 0 ATPase proteolipid family Vma12 PF11712.8 ORF86530 - 8.4 6.5 6.7 1.1 9.4 2.4 1.8 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Abhydrolase_1 PF00561.20 ORF85787 - 2e-10 40.8 0.0 7.4e-09 35.6 0.0 2.2 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF85787 - 0.00095 19.3 0.0 0.0022 18.1 0.0 1.6 1 0 0 1 1 1 1 TAP-like protein Abhydrolase_6 PF12697.7 ORF85787 - 0.0033 18.1 0.2 0.012 16.2 0.2 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family Vg_Tdu PF07545.14 ORF85787 - 0.041 13.6 0.1 0.087 12.6 0.1 1.5 1 0 0 1 1 1 0 Vestigial/Tondu family MFS_1 PF07690.16 ORF81970 - 8.9e-11 41.3 13.2 8.9e-11 41.3 13.2 1.6 1 1 1 2 2 2 2 Major Facilitator Superfamily ABC_tran PF00005.27 ORF80587 - 1e-15 58.5 0.0 3.2e-15 56.9 0.0 1.9 2 0 0 2 2 2 1 ABC transporter ABC_membrane_2 PF06472.15 ORF80587 - 4.1e-11 42.8 0.1 5.6e-11 42.4 0.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 AAA_16 PF13191.6 ORF80587 - 1.6e-06 28.6 0.1 4.4e-06 27.2 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain NACHT PF05729.12 ORF80587 - 0.001 19.0 0.2 0.0022 17.9 0.2 1.8 1 1 0 1 1 1 1 NACHT domain AAA_29 PF13555.6 ORF80587 - 0.0022 17.7 0.8 0.015 15.0 0.2 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF80587 - 0.0082 16.4 0.4 0.04 14.2 0.4 2.1 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF80587 - 0.014 15.3 0.1 0.026 14.4 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase SbmA_BacA PF05992.12 ORF80587 - 0.08 12.4 0.3 0.14 11.6 0.1 1.5 2 0 0 2 2 2 0 SbmA/BacA-like family AAA_30 PF13604.6 ORF80587 - 0.13 11.9 0.0 0.32 10.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF79608 - 5.2e-42 143.4 0.0 8.9e-42 142.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF79608 - 2.5e-16 59.4 0.1 1.6e-15 56.9 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_lid_3 PF17862.1 ORF79608 - 3.6e-06 26.7 0.0 1.2e-05 25.0 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF79608 - 2.1e-05 24.9 0.0 0.00074 19.9 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF79608 - 6.6e-05 22.7 0.0 0.00012 21.8 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF79608 - 0.00024 21.2 0.0 0.00075 19.5 0.0 1.9 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF79608 - 0.00032 20.7 0.0 0.0014 18.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF79608 - 0.00065 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF79608 - 0.0011 18.6 0.3 0.11 12.0 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF79608 - 0.0013 18.9 0.0 0.0039 17.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF79608 - 0.0015 18.8 0.4 0.041 14.1 0.2 2.9 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF79608 - 0.0036 16.5 0.0 0.0059 15.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF79608 - 0.0052 17.0 0.0 0.0089 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF79608 - 0.0073 16.7 0.0 0.022 15.2 0.0 2.0 2 0 0 2 2 1 1 RNA helicase AAA_18 PF13238.6 ORF79608 - 0.0077 16.8 0.0 0.017 15.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF79608 - 0.042 13.6 0.0 0.61 9.8 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_24 PF13479.6 ORF79608 - 0.049 13.4 0.1 0.12 12.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 ORF79608 - 0.053 12.9 0.1 0.1 11.9 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF79608 - 0.066 12.4 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain CPT PF07931.12 ORF79608 - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF79608 - 0.14 11.6 0.1 0.24 10.8 0.1 1.5 1 1 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF79608 - 0.14 11.6 0.3 0.45 10.0 0.0 1.9 2 1 0 2 2 2 0 P-loop containing dynein motor region MIT PF04212.18 ORF79608 - 0.18 11.9 3.2 0.16 12.1 1.5 1.9 2 0 0 2 2 1 0 MIT (microtubule interacting and transport) domain Pkinase PF00069.25 ORF79070 - 1.3e-16 60.8 0.1 2.2e-16 60.0 0.1 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF79070 - 3.7e-08 32.6 1.1 5.1e-08 32.1 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF79070 - 1.2e-07 31.3 0.0 1.7e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF79070 - 4.6e-05 23.5 0.0 7.2e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family ODV-E18 PF10717.9 ORF79070 - 0.0063 16.4 1.0 0.015 15.2 1.0 1.5 1 0 0 1 1 1 1 Occlusion-derived virus envelope protein ODV-E18 NrfD PF03916.14 ORF72713 - 1e-18 68.1 21.9 1.9e-18 67.1 21.9 1.4 1 0 0 1 1 1 1 Polysulphide reductase, NrfD AAA PF00004.29 ORF7119 - 5.2e-42 143.4 0.0 8.9e-42 142.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF7119 - 2.5e-16 59.4 0.1 1.6e-15 56.9 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_lid_3 PF17862.1 ORF7119 - 3.6e-06 26.7 0.0 1.2e-05 25.0 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF7119 - 2.1e-05 24.9 0.0 0.00074 19.9 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF7119 - 6.6e-05 22.7 0.0 0.00012 21.8 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF7119 - 0.00024 21.2 0.0 0.00075 19.5 0.0 1.9 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF7119 - 0.00032 20.7 0.0 0.0014 18.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF7119 - 0.00065 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF7119 - 0.0011 18.6 0.3 0.11 12.0 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF7119 - 0.0013 18.9 0.0 0.0039 17.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF7119 - 0.0015 18.8 0.4 0.041 14.1 0.2 2.9 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF7119 - 0.0036 16.5 0.0 0.0059 15.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF7119 - 0.0052 17.0 0.0 0.0089 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF7119 - 0.0073 16.7 0.0 0.022 15.2 0.0 2.0 2 0 0 2 2 1 1 RNA helicase AAA_18 PF13238.6 ORF7119 - 0.0077 16.8 0.0 0.017 15.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF7119 - 0.042 13.6 0.0 0.61 9.8 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_24 PF13479.6 ORF7119 - 0.049 13.4 0.1 0.12 12.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 ORF7119 - 0.053 12.9 0.1 0.1 11.9 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF7119 - 0.066 12.4 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain CPT PF07931.12 ORF7119 - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF7119 - 0.14 11.6 0.1 0.24 10.8 0.1 1.5 1 1 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF7119 - 0.14 11.6 0.3 0.45 10.0 0.0 1.9 2 1 0 2 2 2 0 P-loop containing dynein motor region MIT PF04212.18 ORF7119 - 0.18 11.9 3.2 0.16 12.1 1.5 1.9 2 0 0 2 2 1 0 MIT (microtubule interacting and transport) domain TEBP_beta PF07404.11 ORF65805 - 1.9e-11 44.0 12.6 2.8e-11 43.4 0.8 2.3 2 1 0 2 2 2 2 Telomere-binding protein beta subunit (TEBP beta) DUF1319 PF07028.11 ORF65805 - 0.023 14.9 0.1 0.023 14.9 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1319) Nuf2 PF03800.14 ORF60607 - 2.6e-14 53.5 0.1 7.9e-14 52.0 0.1 1.9 1 0 0 1 1 1 1 Nuf2 family Golgin_A5 PF09787.9 ORF60607 - 2e-05 24.2 45.4 0.00016 21.3 17.9 2.1 1 1 1 2 2 2 2 Golgin subfamily A member 5 ZapB PF06005.12 ORF60607 - 0.0076 16.7 9.6 0.0076 16.7 9.6 5.4 2 1 2 4 4 4 1 Cell division protein ZapB HMMR_N PF15905.5 ORF60607 - 0.37 10.2 39.4 0.033 13.7 17.2 2.8 1 1 2 3 3 3 0 Hyaluronan mediated motility receptor N-terminal DUF812 PF05667.11 ORF60607 - 1.9 7.3 39.1 0.92 8.3 16.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Baculo_PEP_C PF04513.12 ORF60607 - 2.3 8.3 11.1 0.59 10.2 0.9 3.4 1 1 3 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 ORF60607 - 3.5 7.7 24.3 1 9.4 0.6 4.1 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.12 ORF60607 - 5.3 7.1 58.2 2.9 8.0 9.4 4.0 1 1 3 4 4 4 0 TPR/MLP1/MLP2-like protein CALCOCO1 PF07888.11 ORF60607 - 6.1 5.6 51.1 16 4.2 51.0 1.5 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like Spc7 PF08317.11 ORF60607 - 7.4 5.4 48.2 0.69 8.7 19.2 3.0 1 1 2 3 3 3 0 Spc7 kinetochore protein Seryl_tRNA_N PF02403.22 ORF60607 - 7.4 6.9 41.5 5.7 7.2 6.4 4.6 1 1 4 5 5 5 0 Seryl-tRNA synthetase N-terminal domain Acyl-CoA_dh_1 PF00441.24 ORF59266 - 7.9e-38 130.0 0.6 7.9e-38 130.0 0.6 1.8 1 1 1 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF59266 - 1.7e-24 85.9 0.0 7.4e-24 83.8 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF59266 - 2.4e-13 50.7 0.0 5e-13 49.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF59266 - 4.3e-05 23.8 0.0 7.6e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain RPN1_C PF18051.1 ORF57451 - 1.9e-26 91.8 0.1 3.5e-26 91.0 0.1 1.4 1 0 0 1 1 1 1 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal PC_rep PF01851.22 ORF57451 - 9.2e-08 32.2 13.8 3.8e-05 23.9 1.2 4.6 5 0 0 5 5 5 2 Proteasome/cyclosome repeat HEAT_2 PF13646.6 ORF57451 - 0.045 14.2 3.6 0.051 14.0 0.5 2.6 2 1 1 3 3 3 0 HEAT repeats UTP15_C PF09384.10 ORF57451 - 0.12 12.1 0.0 0.83 9.3 0.0 2.3 3 0 0 3 3 3 0 UTP15 C terminal Glyco_transf_8 PF01501.20 ORF46869 - 4.9e-06 26.3 0.0 7e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 8 LSDAT_prok PF18171.1 ORF36891 - 3.6e-34 117.7 0.0 5.6e-34 117.1 0.0 1.3 1 0 0 1 1 1 1 SLOG in TRPM, prokaryote LSDAT_euk PF18139.1 ORF36891 - 2.2e-10 40.4 0.1 1.1e-08 34.9 0.0 2.2 1 1 1 2 2 2 2 SLOG in TRPM Vma12 PF11712.8 ORF35689 - 8.4 6.5 6.7 1.1 9.4 2.4 1.8 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Peptidase_C14 PF00656.22 ORF35447 - 9.8e-37 127.2 0.0 1.6e-36 126.5 0.0 1.3 1 1 0 1 1 1 1 Caspase domain DNA_topoisoIV PF00521.20 ORF35447 - 0.005 15.8 0.3 0.0067 15.4 0.3 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A Raptor_N PF14538.6 ORF35447 - 0.1 12.6 1.9 6.7 6.7 0.0 2.8 3 0 0 3 3 3 0 Raptor N-terminal CASPase like domain Acyl-CoA_dh_1 PF00441.24 ORF35073 - 7.9e-38 130.0 0.6 7.9e-38 130.0 0.6 1.8 1 1 1 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF35073 - 1.7e-24 85.9 0.0 7.4e-24 83.8 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF35073 - 2.4e-13 50.7 0.0 5e-13 49.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF35073 - 4.3e-05 23.8 0.0 7.6e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_1 PF00441.24 ORF33297 - 7.9e-38 130.0 0.6 7.9e-38 130.0 0.6 1.8 1 1 1 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF33297 - 1.7e-24 85.9 0.0 7.4e-24 83.8 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF33297 - 2.4e-13 50.7 0.0 5e-13 49.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF33297 - 4.3e-05 23.8 0.0 7.6e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain AAA PF00004.29 ORF32748 - 5.2e-42 143.4 0.0 8.9e-42 142.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF32748 - 2.5e-16 59.4 0.1 1.6e-15 56.9 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_lid_3 PF17862.1 ORF32748 - 3.6e-06 26.7 0.0 1.2e-05 25.0 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF32748 - 2.1e-05 24.9 0.0 0.00074 19.9 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF32748 - 6.6e-05 22.7 0.0 0.00012 21.8 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF32748 - 0.00024 21.2 0.0 0.00075 19.5 0.0 1.9 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF32748 - 0.00032 20.7 0.0 0.0014 18.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF32748 - 0.00065 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF32748 - 0.0011 18.6 0.3 0.11 12.0 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF32748 - 0.0013 18.9 0.0 0.0039 17.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF32748 - 0.0015 18.8 0.4 0.041 14.1 0.2 2.9 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF32748 - 0.0036 16.5 0.0 0.0059 15.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF32748 - 0.0052 17.0 0.0 0.0089 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF32748 - 0.0073 16.7 0.0 0.022 15.2 0.0 2.0 2 0 0 2 2 1 1 RNA helicase AAA_18 PF13238.6 ORF32748 - 0.0077 16.8 0.0 0.017 15.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF32748 - 0.042 13.6 0.0 0.61 9.8 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_24 PF13479.6 ORF32748 - 0.049 13.4 0.1 0.12 12.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 ORF32748 - 0.053 12.9 0.1 0.1 11.9 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF32748 - 0.066 12.4 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain CPT PF07931.12 ORF32748 - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF32748 - 0.14 11.6 0.1 0.24 10.8 0.1 1.5 1 1 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF32748 - 0.14 11.6 0.3 0.45 10.0 0.0 1.9 2 1 0 2 2 2 0 P-loop containing dynein motor region MIT PF04212.18 ORF32748 - 0.18 11.9 3.2 0.16 12.1 1.5 1.9 2 0 0 2 2 1 0 MIT (microtubule interacting and transport) domain Cyclin PF08613.11 ORF30157 - 9.6e-12 45.6 2.8 3.1e-11 43.9 2.8 2.2 1 1 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF30157 - 0.00015 21.5 0.2 0.00033 20.4 0.2 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain Peptidase_C14 PF00656.22 ORF29606 - 5.8e-34 118.1 0.0 8.8e-34 117.6 0.0 1.2 1 0 0 1 1 1 1 Caspase domain DNA_topoisoIV PF00521.20 ORF29606 - 0.0034 16.3 0.0 0.0047 15.9 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A Raptor_N PF14538.6 ORF29606 - 0.079 12.9 1.6 4.2 7.3 0.0 2.4 2 0 0 2 2 2 0 Raptor N-terminal CASPase like domain MFS_1 PF07690.16 ORF26503 - 3e-26 92.2 42.3 7.4e-16 58.0 18.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF26503 - 1.4e-08 34.1 31.6 3.7e-05 22.8 12.7 2.1 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 ORF26503 - 7.9 5.2 13.8 1.1 8.0 7.1 2.6 1 1 1 2 2 2 0 MFS_1 like family DUF2804 PF10974.8 ORF23849 - 1.5e-40 139.8 5.9 1.7e-40 139.5 5.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2804) AAA PF00004.29 ORF191 - 5.2e-42 143.4 0.0 8.9e-42 142.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF191 - 2.5e-16 59.4 0.1 1.6e-15 56.9 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_lid_3 PF17862.1 ORF191 - 3.6e-06 26.7 0.0 1.2e-05 25.0 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF191 - 2.1e-05 24.9 0.0 0.00074 19.9 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF191 - 6.6e-05 22.7 0.0 0.00012 21.8 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF191 - 0.00024 21.2 0.0 0.00075 19.5 0.0 1.9 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF191 - 0.00032 20.7 0.0 0.0014 18.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF191 - 0.00065 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF191 - 0.0011 18.6 0.3 0.11 12.0 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF191 - 0.0013 18.9 0.0 0.0039 17.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF191 - 0.0015 18.8 0.4 0.041 14.1 0.2 2.9 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF191 - 0.0036 16.5 0.0 0.0059 15.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF191 - 0.0052 17.0 0.0 0.0089 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF191 - 0.0073 16.7 0.0 0.022 15.2 0.0 2.0 2 0 0 2 2 1 1 RNA helicase AAA_18 PF13238.6 ORF191 - 0.0077 16.8 0.0 0.017 15.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF191 - 0.042 13.6 0.0 0.61 9.8 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_24 PF13479.6 ORF191 - 0.049 13.4 0.1 0.12 12.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 ORF191 - 0.053 12.9 0.1 0.1 11.9 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF191 - 0.066 12.4 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain CPT PF07931.12 ORF191 - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF191 - 0.14 11.6 0.1 0.24 10.8 0.1 1.5 1 1 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF191 - 0.14 11.6 0.3 0.45 10.0 0.0 1.9 2 1 0 2 2 2 0 P-loop containing dynein motor region MIT PF04212.18 ORF191 - 0.18 11.9 3.2 0.16 12.1 1.5 1.9 2 0 0 2 2 1 0 MIT (microtubule interacting and transport) domain Amino_oxidase PF01593.24 ORF18481 - 7.2e-29 101.4 0.0 8.9e-29 101.1 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase p450 PF00067.22 ORF15190 - 4e-58 197.3 0.0 5.2e-58 196.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF4403 PF14356.6 ORF13299 - 0.0049 15.6 0.0 0.0073 15.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4403) JHBP PF06585.11 ORF13299 - 0.053 12.7 0.6 0.1 11.8 0.6 1.4 1 0 0 1 1 1 0 Haemolymph juvenile hormone binding protein (JHBP) Pkinase PF00069.25 ORF112553 - 1.3e-16 60.8 0.1 2.2e-16 60.0 0.1 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF112553 - 3.7e-08 32.6 1.1 5.1e-08 32.1 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF112553 - 1.2e-07 31.3 0.0 1.7e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF112553 - 4.6e-05 23.5 0.0 7.2e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family ODV-E18 PF10717.9 ORF112553 - 0.0063 16.4 1.0 0.015 15.2 1.0 1.5 1 0 0 1 1 1 1 Occlusion-derived virus envelope protein ODV-E18 SAM_2 PF07647.17 ORF110353 - 0.00012 22.2 0.0 0.00022 21.2 0.0 1.5 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) DUF4022 PF13214.6 ORF110353 - 0.56 10.5 4.4 0.27 11.5 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4022) Phage_holin_3_6 PF07332.11 ORF110353 - 1.1 9.4 5.2 2.8 8.0 5.2 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Aldedh PF00171.22 ORF107692 - 1.5e-56 191.8 0.0 1.8e-56 191.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family BTB PF00651.31 ORF107692 - 0.12 12.6 0.1 10 6.4 0.1 2.3 2 0 0 2 2 2 0 BTB/POZ domain Acyl-CoA_dh_1 PF00441.24 ORF105310 - 7.9e-38 130.0 0.6 7.9e-38 130.0 0.6 1.8 1 1 1 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF105310 - 1.7e-24 85.9 0.0 7.4e-24 83.8 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF105310 - 2.4e-13 50.7 0.0 5e-13 49.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF105310 - 4.3e-05 23.8 0.0 7.6e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Pkinase PF00069.25 ORF105054 - 8.3e-77 258.1 0.2 1.5e-76 257.3 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105054 - 1.3e-47 162.3 0.0 2.1e-47 161.6 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF105054 - 4.5e-09 36.8 0.9 1.1e-08 35.5 0.9 1.7 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF105054 - 2.8e-07 30.1 0.0 4.9e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF105054 - 0.00064 19.1 0.0 0.013 14.8 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF105054 - 0.011 14.5 0.0 0.023 13.5 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF105054 - 0.21 11.5 0.0 0.52 10.2 0.0 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family YjcQ PF09639.10 NODE_14357_length_1174_cov_198.762950_g10799_i0reverse_frame_2 - 0.11 12.7 2.4 0.67 10.2 0.0 2.9 3 0 0 3 3 3 0 YjcQ protein BP28CT PF08146.12 NODE_14357_length_1174_cov_198.762950_g10799_i0forward_frame_2 - 0.12 12.2 1.2 0.15 11.9 0.3 1.6 2 0 0 2 2 2 0 BP28CT (NUC211) domain Sp38 PF07354.12 NODE_14287_length_1176_cov_279.931639_g10738_i0reverse_frame_3 - 0.019 14.4 50.3 0.36 10.2 3.9 6.7 2 2 5 7 7 7 0 Zona-pellucida-binding protein (Sp38) Peptidase_M16_C PF05193.21 NODE_14287_length_1176_cov_279.931639_g10738_i0reverse_frame_2 - 0.015 15.3 0.1 21 5.0 0.0 4.3 3 1 1 4 4 4 0 Peptidase M16 inactive domain HalX PF08663.10 NODE_14287_length_1176_cov_279.931639_g10738_i0reverse_frame_2 - 2.4 8.6 26.4 6.1 7.2 0.3 5.3 4 1 1 5 5 5 0 HalX domain FNIP PF05725.12 NODE_14287_length_1176_cov_279.931639_g10738_i0forward_frame_3 - 5.9e-34 116.0 9.2 4.6e-11 42.7 1.4 4.2 3 1 1 4 4 4 4 FNIP Repeat DUF4880 PF16220.5 NODE_14287_length_1176_cov_279.931639_g10738_i0forward_frame_3 - 0.22 11.5 20.0 14 5.7 0.1 7.2 9 0 0 9 9 9 0 Domain of unknown function (DUF4880) DUF3136 PF11334.8 NODE_14287_length_1176_cov_279.931639_g10738_i0forward_frame_2 - 0.12 12.2 7.4 57 3.6 0.1 5.2 4 3 2 6 6 6 0 Protein of unknown function (DUF3136) FAM76 PF16046.5 ORF99102 - 0.1 11.9 5.7 0.21 10.9 5.7 1.5 1 0 0 1 1 1 0 FAM76 protein DUF745 PF05335.13 ORF99102 - 5.8 6.6 7.6 13 5.4 7.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF745) zf_CCCH_4 PF18345.1 ORF96435 - 0.0005 20.0 0.6 0.0012 18.8 0.6 1.6 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 ORF96435 - 0.00069 19.5 1.4 0.00069 19.5 1.4 2.2 3 0 0 3 3 3 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) DDHD PF02862.17 ORF96435 - 0.067 13.3 9.9 0.52 10.4 1.4 2.2 2 0 0 2 2 2 0 DDHD domain Sin_N PF04801.13 ORF96435 - 0.19 10.9 18.4 0.017 14.4 5.9 2.1 2 0 0 2 2 2 0 Sin-like protein conserved region CPSF100_C PF13299.6 ORF96435 - 1.2 9.3 16.5 1.7 8.8 1.0 2.3 2 0 0 2 2 2 0 Cleavage and polyadenylation factor 2 C-terminal RNA_pol_Rpc4 PF05132.14 ORF96435 - 1.2 9.6 22.5 1.3 9.4 9.3 2.4 2 0 0 2 2 2 0 RNA polymerase III RPC4 Zip PF02535.22 ORF96435 - 2.9 7.0 12.0 1.6 7.9 6.2 2.1 2 0 0 2 2 2 0 ZIP Zinc transporter Vfa1 PF08432.10 ORF96435 - 4.1 7.7 35.5 0.22 11.8 7.3 2.3 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 Mpp10 PF04006.12 ORF96435 - 4.1 5.7 36.8 1.3 7.4 15.6 2.1 2 0 0 2 2 2 0 Mpp10 protein DUF913 PF06025.12 ORF96435 - 5.8 5.8 12.3 2.6 6.9 0.6 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) BORG_CEP PF14957.6 ORF96435 - 9.2 7.5 15.8 3.9 8.7 4.2 2.6 2 0 0 2 2 2 0 Cdc42 effector SAPS PF04499.15 ORF96435 - 9.3 4.9 12.9 1.2 7.9 2.9 2.0 2 0 0 2 2 2 0 SIT4 phosphatase-associated protein Plasmodium_Vir PF05795.11 ORF96435 - 9.5 5.5 17.7 3.3 7.0 0.9 2.2 2 0 0 2 2 2 0 Plasmodium vivax Vir protein Abhydrolase_6 PF12697.7 ORF90200 - 7.9e-10 39.7 0.5 1.1e-09 39.3 0.5 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF90200 - 1.6e-07 31.7 0.0 2.6e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain STAT2_C PF12188.8 ORF87617 - 0.33 10.9 1.1 1.1 9.2 0.0 2.3 3 0 0 3 3 3 0 Signal transducer and activator of transcription 2 C terminal Na_Ca_ex PF01699.24 ORF81215 - 5.5e-37 127.0 30.4 6.8e-22 78.1 13.7 2.2 2 0 0 2 2 2 2 Sodium/calcium exchanger protein DPM3 PF08285.11 ORF81215 - 0.037 14.2 0.1 0.037 14.2 0.1 2.3 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF485 PF04341.12 ORF81215 - 0.12 12.4 4.2 0.9 9.5 1.6 2.9 2 0 0 2 2 2 0 Protein of unknown function, DUF485 Aldedh PF00171.22 ORF78002 - 3.8e-66 223.5 0.0 4.3e-66 223.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family KH_1 PF00013.29 ORF75641 - 5.8e-14 51.7 0.0 6.5e-07 29.1 0.0 3.2 3 0 0 3 3 3 2 KH domain zf-ribbon_3 PF13248.6 ORF75641 - 4.3e-05 22.8 3.8 9.1e-05 21.7 3.8 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF75641 - 0.00016 21.6 1.2 0.00035 20.5 1.2 1.5 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF75641 - 0.0026 18.5 0.1 0.004 17.9 0.1 1.3 1 0 0 1 1 1 1 zinc-ribbon family zinc_ribbon_2 PF13240.6 ORF75641 - 0.0045 16.7 5.2 0.01 15.5 5.2 1.6 1 0 0 1 1 1 1 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 ORF75641 - 0.017 14.7 0.1 0.035 13.6 0.1 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding TerY_C PF15616.6 ORF75641 - 0.018 15.1 0.8 0.031 14.4 0.8 1.3 1 0 0 1 1 1 0 TerY-C metal binding domain KH_2 PF07650.17 ORF75641 - 0.031 14.1 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 KH domain HypA PF01155.19 ORF75641 - 0.042 13.9 0.1 0.098 12.7 0.1 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_4 PF13717.6 ORF75641 - 0.34 10.9 3.0 0.58 10.1 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Kinase-PPPase PF03618.14 ORF6749 - 2.3e-72 243.9 0.0 3.4e-72 243.3 0.0 1.3 1 0 0 1 1 1 1 Kinase/pyrophosphorylase LRIF1 PF15741.5 ORF64393 - 5.4 5.4 11.8 7.4 5.0 11.8 1.2 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 Aldedh PF00171.22 ORF60860 - 3.8e-66 223.5 0.0 4.3e-66 223.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Pkinase PF00069.25 ORF49069 - 6.9e-45 153.5 0.0 9.7e-45 153.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain POLO_box PF00659.18 ORF49069 - 8.2e-29 99.6 0.9 5.5e-20 71.3 0.2 2.6 2 0 0 2 2 2 2 POLO box duplicated region Pkinase_Tyr PF07714.17 ORF49069 - 7.4e-24 84.4 0.0 1.1e-23 83.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF49069 - 1.1e-06 27.7 0.0 2.5e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF49069 - 5.7e-06 25.8 0.0 7.7e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Aldedh PF00171.22 ORF46416 - 3.8e-66 223.5 0.0 4.3e-66 223.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family AAA_31 PF13614.6 ORF45053 - 7e-29 101.0 0.0 1.1e-28 100.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 ORF45053 - 3.3e-17 62.7 0.0 4.6e-17 62.3 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 ORF45053 - 4.9e-05 22.9 0.9 0.0035 16.8 0.0 2.7 3 0 0 3 3 3 1 NUBPL iron-transfer P-loop NTPase MerR PF00376.23 ORF45053 - 8.8e-05 22.2 0.0 0.0002 21.0 0.0 1.6 1 0 0 1 1 1 1 MerR family regulatory protein MipZ PF09140.11 ORF45053 - 0.00048 19.5 0.6 0.07 12.4 0.1 2.2 2 0 0 2 2 2 2 ATPase MipZ ArsA_ATPase PF02374.15 ORF45053 - 0.00062 19.1 0.6 0.077 12.2 0.1 2.2 2 0 0 2 2 2 2 Anion-transporting ATPase VirC1 PF07015.11 ORF45053 - 0.012 14.9 0.1 5.1 6.3 0.0 2.3 2 0 0 2 2 2 0 VirC1 protein HTH_31 PF13560.6 ORF45053 - 0.03 14.7 0.2 0.092 13.1 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_Cox PF10743.9 ORF45053 - 0.13 12.3 0.1 0.39 10.8 0.0 1.8 2 0 0 2 2 2 0 Regulatory phage protein cox LRIF1 PF15741.5 ORF43264 - 5.4 5.4 11.8 7.4 5.0 11.8 1.2 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 DUF1664 PF07889.12 ORF41511 - 5.4e-05 23.2 12.8 0.015 15.4 0.1 3.3 2 1 1 3 3 3 2 Protein of unknown function (DUF1664) Apolipoprotein PF01442.18 ORF41511 - 6.9e-05 22.8 19.5 0.0019 18.1 10.0 2.5 1 1 1 2 2 2 2 Apolipoprotein A1/A4/E domain DUF1515 PF07439.11 ORF41511 - 0.0024 17.9 0.5 0.0024 17.9 0.5 3.4 1 1 4 5 5 5 1 Protein of unknown function (DUF1515) HMMR_N PF15905.5 ORF41511 - 0.017 14.6 15.2 0.011 15.2 9.4 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal TBD PF12845.7 ORF41511 - 0.035 14.0 0.1 0.12 12.3 0.1 2.1 1 0 0 1 1 1 0 TBD domain Baculo_PEP_C PF04513.12 ORF41511 - 0.035 14.1 9.7 4.3 7.4 3.8 3.2 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Interferon PF00143.19 ORF41511 - 0.088 13.0 9.1 0.34 11.1 2.6 2.4 1 1 0 2 2 2 0 Interferon alpha/beta domain YtxH PF12732.7 ORF41511 - 0.22 12.1 4.4 1.3e+02 3.2 4.4 3.5 1 1 0 1 1 1 0 YtxH-like protein DUF4709 PF15821.5 ORF41511 - 2.2 8.6 10.7 7.9 6.8 0.2 3.2 1 1 2 3 3 3 0 Domain of unknown function (DUF4709) Spectrin PF00435.21 ORF41511 - 3 8.4 17.5 6 7.4 4.0 4.0 1 1 3 4 4 4 0 Spectrin repeat DUF1525 PF07511.11 ORF41511 - 4.5 7.5 9.7 2.8 8.1 5.4 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) Fib_alpha PF08702.10 ORF41511 - 5.2 7.2 13.0 3.7 7.7 7.1 2.9 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family zf-C4H2 PF10146.9 ORF41511 - 6.2 7.1 12.1 18 5.6 0.3 2.2 1 1 1 2 2 2 0 Zinc finger-containing protein ABC1 PF03109.16 ORF39266 - 4.4e-28 97.8 0.0 9.2e-28 96.8 0.0 1.5 2 0 0 2 2 2 1 ABC1 family Pkinase PF00069.25 ORF39266 - 3.6e-06 26.5 0.0 3.3e-05 23.4 0.0 2.0 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF39266 - 4.9e-05 23.4 0.0 0.00016 21.7 0.0 1.9 1 1 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF39266 - 0.001 18.7 0.0 0.018 14.7 0.0 2.4 2 1 0 2 2 2 1 RIO1 family KH_1 PF00013.29 ORF35411 - 5.8e-14 51.7 0.0 6.5e-07 29.1 0.0 3.2 3 0 0 3 3 3 2 KH domain zf-ribbon_3 PF13248.6 ORF35411 - 4.3e-05 22.7 3.8 9.1e-05 21.7 3.8 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF35411 - 0.00016 21.6 1.2 0.00035 20.5 1.2 1.5 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF35411 - 0.0026 18.5 0.1 0.004 17.9 0.1 1.3 1 0 0 1 1 1 1 zinc-ribbon family zinc_ribbon_2 PF13240.6 ORF35411 - 0.0045 16.6 5.2 0.01 15.5 5.2 1.6 1 0 0 1 1 1 1 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 ORF35411 - 0.017 14.7 0.1 0.035 13.6 0.1 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding TerY_C PF15616.6 ORF35411 - 0.018 15.1 0.8 0.031 14.4 0.8 1.3 1 0 0 1 1 1 0 TerY-C metal binding domain KH_2 PF07650.17 ORF35411 - 0.031 14.1 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 KH domain HypA PF01155.19 ORF35411 - 0.042 13.9 0.1 0.098 12.7 0.1 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_4 PF13717.6 ORF35411 - 0.34 10.9 3.0 0.58 10.1 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain p450 PF00067.22 ORF30474 - 5.6e-58 196.8 0.0 7.3e-58 196.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Abhydro_lipase PF04083.16 ORF30324 - 2.5e-16 59.0 0.0 5.6e-16 57.9 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF30324 - 2.5e-06 27.3 0.0 5.3e-06 26.3 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold LRIF1 PF15741.5 ORF2569 - 5.4 5.4 11.8 7.4 5.0 11.8 1.2 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 Kinesin PF00225.23 ORF19186 - 6.3e-112 373.8 3.8 7.5e-112 373.5 3.8 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF19186 - 1.6e-25 89.8 0.3 3.6e-25 88.6 0.3 1.6 1 0 0 1 1 1 1 Microtubule binding p450 PF00067.22 ORF17725 - 4.8e-76 256.4 0.0 5.6e-76 256.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 LRIF1 PF15741.5 ORF17567 - 5.4 5.4 11.8 7.4 5.0 11.8 1.2 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 Ion_trans PF00520.31 ORF13945 - 2.1e-07 30.5 14.7 3.4e-07 29.7 14.7 1.3 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF13945 - 3.4e-07 30.1 5.4 3.4e-07 30.1 5.4 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF13945 - 1.5e-06 28.2 1.6 3.7e-06 26.9 1.6 1.7 1 0 0 1 1 1 1 Calcium-activated SK potassium channel Med9 PF07544.13 ORF13945 - 0.036 14.1 0.3 0.18 11.9 0.3 2.0 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Pox_A_type_inc PF04508.12 ORF13945 - 0.18 11.7 1.6 0.41 10.6 1.6 1.6 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat CAP PF00188.26 ORF13667 - 0.0001 23.1 0.0 0.00049 20.9 0.0 2.2 2 0 0 2 2 2 1 Cysteine-rich secretory protein family CTNNBL PF08216.11 ORF13667 - 0.29 11.3 1.8 1.5 9.0 0.2 2.5 2 0 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear MFS_1 PF07690.16 ORF13304 - 8.1e-44 150.0 37.9 8.1e-44 150.0 37.9 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF13304 - 9.4e-13 47.8 6.0 9.4e-13 47.8 6.0 2.8 2 1 0 2 2 2 1 Sugar (and other) transporter TRI12 PF06609.13 ORF13304 - 6.2e-07 28.2 3.6 6.2e-07 28.2 3.6 1.8 1 1 1 2 2 2 1 Fungal trichothecene efflux pump (TRI12) DUF3652 PF12372.8 ORF13304 - 0.0094 15.8 0.2 4 7.4 0.1 2.5 2 0 0 2 2 2 2 Huntingtin protein region CLN3 PF02487.17 ORF13304 - 0.028 13.5 19.1 0.49 9.4 14.9 2.5 2 1 0 2 2 2 0 CLN3 protein MFS_4 PF06779.14 ORF13304 - 0.065 12.5 28.8 0.67 9.2 27.8 2.3 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 ORF13304 - 1.6 7.5 15.3 0.046 12.6 0.5 2.9 1 1 1 2 2 2 0 MFS_1 like family DUF3382 PF11862.8 ORF13304 - 2 8.7 13.1 0.81 10.0 0.2 4.5 2 2 2 5 5 5 0 Domain of unknown function (DUF3382) FeoB_C PF07664.12 ORF13304 - 8.3 6.2 11.8 12 5.6 0.1 4.3 4 0 0 4 4 4 0 Ferrous iron transport protein B C terminus UPF0542 PF15086.6 ORF12320 - 0.13 12.2 4.7 8.7 6.4 0.5 3.9 3 0 0 3 3 3 0 Uncharacterised protein family UPF0542 TRP PF06011.12 ORF12320 - 2.2 6.9 12.0 8.2 5.0 12.0 2.0 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel Chorismate_bind PF00425.18 ORF11683 - 2.9e-69 233.5 0.0 3.6e-69 233.2 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Tektin PF03148.14 ORF11683 - 0.078 11.7 0.0 0.15 10.8 0.0 1.4 1 0 0 1 1 1 0 Tektin family FAD_binding_3 PF01494.19 ORF108981 - 6.7e-29 101.2 0.0 8.8e-29 100.8 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 ORF108981 - 1.1e-05 24.7 6.0 0.00035 19.7 6.0 2.7 1 1 0 1 1 1 1 Lycopene cyclase protein SE PF08491.10 ORF108981 - 1.3e-05 24.4 0.0 2.9e-05 23.3 0.0 1.6 2 0 0 2 2 2 1 Squalene epoxidase Trp_halogenase PF04820.14 ORF108981 - 6.9e-05 21.9 1.8 0.027 13.3 0.0 2.7 2 1 0 2 2 2 2 Tryptophan halogenase Pyr_redox_2 PF07992.14 ORF108981 - 0.0001 21.7 0.5 0.0058 15.9 0.3 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF108981 - 0.00026 20.7 5.8 0.00051 19.7 5.2 2.0 1 1 1 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF108981 - 0.00038 20.6 1.1 0.001 19.2 1.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain F420_oxidored PF03807.17 ORF108981 - 0.0042 17.6 0.2 0.0075 16.8 0.2 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 ORF108981 - 0.0063 16.4 0.4 0.012 15.5 0.4 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 ORF108981 - 0.0068 16.4 0.4 0.038 14.0 0.4 2.0 1 1 0 1 1 1 1 FAD-NAD(P)-binding Pyr_redox PF00070.27 ORF108981 - 0.011 16.3 0.9 0.029 14.9 0.9 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 ORF108981 - 0.018 14.7 0.2 0.029 14.0 0.2 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 ORF108981 - 0.025 14.2 0.5 0.038 13.6 0.5 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 ORF108981 - 0.031 14.5 0.0 0.063 13.5 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain FAD_binding_2 PF00890.24 ORF108981 - 0.043 12.9 0.6 0.077 12.1 0.6 1.4 1 0 0 1 1 1 0 FAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF108981 - 0.087 12.8 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GIDA PF01134.22 ORF108981 - 0.2 10.7 0.5 5 6.1 0.7 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A DUF3659 PF12396.8 ORF108035 - 0.25 11.3 4.9 0.27 11.2 2.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) LRIF1 PF15741.5 ORF108035 - 8 4.9 12.4 11 4.4 12.4 1.1 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 Patatin PF01734.22 NODE_14411_length_1171_cov_1105.427817_g10843_i0reverse_frame_3 - 3.4e-24 86.2 0.7 1.5e-23 84.0 0.2 2.1 2 1 0 2 2 2 1 Patatin-like phospholipase Abhydro_lipase PF04083.16 ORF99434 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF99434 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF94547 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF94547 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF92003 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF92003 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold RCC1_2 PF13540.6 ORF88528 - 6.3e-35 118.3 26.6 2.5e-06 27.1 0.1 7.3 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF88528 - 3.5e-12 46.8 17.8 1.6 9.4 0.1 10.1 7 4 1 8 8 8 6 Regulator of chromosome condensation (RCC1) repeat Methyltranf_PUA PF13636.6 ORF88528 - 0.0033 17.4 0.0 1.2 9.1 0.0 3.7 4 0 0 4 4 4 1 RNA-binding PUA-like domain of methyltransferase RsmF FAM35_C PF15793.5 ORF88528 - 0.15 11.4 0.0 20 4.5 0.0 3.0 3 0 0 3 3 3 0 Protein family FAM35, C-terminal Glyco_transf_11 PF01531.16 ORF85530 - 0.0061 15.8 0.1 0.0087 15.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 11 RicinB_lectin_2 PF14200.6 ORF78593 - 0.087 13.6 2.4 1 10.1 0.1 3.5 2 1 3 5 5 5 0 Ricin-type beta-trefoil lectin domain-like NAAA-beta PF15508.6 ORF75022 - 5.4e-05 23.4 0.2 0.00016 21.9 0.1 1.9 2 0 0 2 2 2 1 beta subunit of N-acylethanolamine-hydrolyzing acid amidase CRISPR_Cse2 PF09485.10 ORF74392 - 0.043 14.3 0.1 10 6.6 0.0 2.3 2 0 0 2 2 2 0 CRISPR-associated protein Cse2 (CRISPR_cse2) A_deaminase PF00962.22 ORF72846 - 3e-42 145.1 0.0 6.6e-41 140.7 0.0 2.0 1 1 0 1 1 1 1 Adenosine/AMP deaminase NMD3 PF04981.13 ORF63215 - 8.4e-69 231.7 8.7 1.1e-68 231.4 8.7 1.1 1 0 0 1 1 1 1 NMD3 family zf-RING_12 PF17976.1 ORF63215 - 0.033 14.5 1.7 6.8 7.0 0.2 3.1 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain TackOD1 PF18551.1 ORF63215 - 0.15 11.7 6.8 3.2 7.4 4.9 2.8 2 1 1 3 3 3 0 Thaumarchaeal output domain 1 HypA PF01155.19 ORF63215 - 0.97 9.5 5.3 6.9 6.7 1.9 2.6 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CxC4 PF18717.1 ORF63215 - 1.5 8.6 5.7 5.1 6.9 2.0 2.5 2 0 0 2 2 2 0 CxC4 like cysteine cluster associated with KDZ transposases VWA_2 PF13519.6 ORF55108 - 3e-16 60.0 0.0 5.7e-16 59.1 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain Ssl1 PF04056.14 ORF55108 - 0.0013 18.5 0.0 0.0019 18.0 0.0 1.2 1 0 0 1 1 1 1 Ssl1-like Ank_2 PF12796.7 ORF44612 - 1.5e-46 156.9 3.3 7.7e-11 42.4 0.2 4.4 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank PF00023.30 ORF44612 - 9.8e-38 127.0 12.4 0.00039 20.7 0.0 8.3 8 0 0 8 8 8 7 Ankyrin repeat Ank_5 PF13857.6 ORF44612 - 3e-37 126.2 7.4 8.2e-07 29.2 0.0 7.3 1 1 7 8 8 8 7 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF44612 - 2.3e-31 107.8 8.4 4.3e-10 39.9 0.1 5.7 3 2 3 6 6 6 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF44612 - 3.4e-30 100.7 0.5 0.0017 18.7 0.0 8.9 8 1 1 9 9 9 7 Ankyrin repeat CCD PF07860.11 ORF44612 - 0.22 11.6 0.0 0.37 10.8 0.0 1.3 1 0 0 1 1 1 0 WisP family C-Terminal Region EccE PF11203.8 ORF44612 - 9.8 6.6 10.1 7.2 7.0 0.2 4.2 1 1 2 3 3 3 0 Putative type VII ESX secretion system translocon, EccE AAA_2 PF07724.14 ORF42308 - 4.3e-21 75.8 0.1 1.3e-20 74.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF42308 - 6.4e-21 74.2 0.1 1.3e-20 73.3 0.1 1.5 1 0 0 1 1 1 1 AAA lid domain ClpB_D2-small PF10431.9 ORF42308 - 2.3e-20 72.4 0.0 9e-20 70.5 0.0 2.1 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 ORF42308 - 2.8e-07 31.0 0.0 1.3e-06 28.8 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF2283 PF10049.9 ORF42308 - 0.011 16.0 4.5 2.1 8.6 0.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2283) TniB PF05621.11 ORF42308 - 0.013 15.0 0.0 0.026 13.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein Abhydro_lipase PF04083.16 ORF3931 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF3931 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Amidohydro_3 PF07969.11 ORF38486 - 1.3e-11 44.6 0.2 1.4e-05 24.8 0.1 2.2 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 ORF38486 - 1.6e-09 37.6 0.1 6.7e-06 25.7 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family DUF3523 PF12037.8 ORF37726 - 0.53 9.6 2.0 0.37 10.1 0.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3523) eIF3_N PF09440.10 ORF3459 - 2.9e-14 53.7 10.2 2.9e-14 53.7 10.2 2.3 2 0 0 2 2 2 1 eIF3 subunit 6 N terminal domain TPR_19 PF14559.6 ORF3459 - 0.00054 20.4 0.0 0.0015 19.0 0.0 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat PCI PF01399.27 ORF3459 - 0.00056 20.4 1.6 0.00056 20.4 1.6 2.4 2 1 0 2 2 2 1 PCI domain SRP_TPR_like PF17004.5 ORF3459 - 0.0063 16.5 2.5 0.039 14.0 0.9 2.8 2 1 0 2 2 2 1 Putative TPR-like repeat ANAPC3 PF12895.7 ORF3459 - 0.0064 16.7 0.2 0.024 14.8 0.2 2.0 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF3459 - 0.025 15.4 0.0 0.13 13.2 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF3459 - 0.04 14.3 0.9 0.095 13.0 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat WPP PF13943.6 ORF3459 - 0.056 13.8 0.9 0.14 12.6 0.9 1.6 1 0 0 1 1 1 0 WPP domain TPR_17 PF13431.6 ORF3459 - 0.071 13.5 0.1 0.3 11.5 0.1 2.2 1 0 0 1 1 1 0 Tetratricopeptide repeat CSN8_PSD8_EIF3K PF10075.9 ORF3459 - 0.11 12.5 3.9 0.17 11.8 0.2 2.7 2 1 0 2 2 2 0 CSN8/PSMD8/EIF3K family FliD_N PF02465.18 ORF3459 - 0.65 10.7 6.7 0.38 11.5 3.3 2.4 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Spore_III_AB PF09548.10 ORF3459 - 2 8.5 11.2 2.4 8.2 0.2 3.2 3 0 0 3 3 3 0 Stage III sporulation protein AB (spore_III_AB) Cytochrom_NNT PF03264.14 ORF32551 - 2.5e-69 232.5 8.3 1.3e-68 230.1 6.0 2.1 2 0 0 2 2 2 1 NapC/NirT cytochrome c family, N-terminal region Cytochrome_C7 PF14522.6 ORF32551 - 6.3e-10 38.9 12.2 4.6e-05 23.3 3.6 3.6 3 0 0 3 3 3 3 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 ORF32551 - 5.2e-06 26.8 18.3 0.013 16.0 6.6 3.3 3 0 0 3 3 3 2 Cytochrome c3 Cytochrome_CBB3 PF13442.6 ORF32551 - 1.8e-05 25.0 14.0 0.17 12.3 0.0 5.4 3 1 2 5 5 5 2 Cytochrome C oxidase, cbb3-type, subunit III IRF-2BP1_2 PF11261.8 ORF32551 - 5.6e-05 22.6 0.8 0.00013 21.4 0.1 1.9 2 0 0 2 2 2 1 Interferon regulatory factor 2-binding protein zinc finger Paired_CXXCH_1 PF09699.10 ORF32551 - 0.00068 19.3 25.2 0.0042 16.8 5.1 4.5 3 2 2 5 5 5 2 Doubled CXXCH motif (Paired_CXXCH_1) DHC PF09626.10 ORF32551 - 0.0013 19.6 1.0 0.071 14.0 0.7 4.7 3 2 1 4 4 4 2 Dihaem cytochrome c Cytochrom_CIII PF02085.16 ORF32551 - 0.095 13.0 24.1 1 9.7 9.1 3.5 2 1 2 4 4 4 0 Class III cytochrome C family GF_recep_IV PF14843.6 ORF32551 - 0.29 10.9 8.5 0.47 10.2 1.2 3.1 3 0 0 3 3 3 0 Growth factor receptor domain IV Cytochrom_C1 PF02167.15 ORF32551 - 0.75 9.5 4.6 16 5.1 0.8 3.2 2 1 2 4 4 4 0 Cytochrome C1 family Cytochrom_C PF00034.21 ORF32551 - 3.6 8.8 18.2 2.6 9.3 0.5 4.2 2 1 1 3 3 3 0 Cytochrome c DUF3365 PF11845.8 ORF32551 - 4.9 7.5 0.0 4.9 7.5 0.0 4.5 2 1 1 4 4 4 0 Protein of unknown function (DUF3365) DUF4239 PF14023.6 ORF29798 - 0.039 13.7 0.3 0.12 12.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4239) cobW PF02492.19 ORF27271 - 1e-57 194.5 0.9 1.4e-57 194.1 0.9 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF27271 - 1.4e-17 63.4 0.0 2.4e-17 62.7 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain GTP_EFTU PF00009.27 ORF27271 - 7.9e-05 22.3 2.2 0.00074 19.1 2.1 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF27271 - 0.00016 21.6 0.1 0.28 11.1 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase AAA_22 PF13401.6 ORF27271 - 0.00021 21.6 0.0 0.12 12.7 0.1 2.4 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF27271 - 0.0025 18.2 0.0 0.0074 16.7 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain TsaE PF02367.17 ORF27271 - 0.0072 16.3 0.0 0.015 15.3 0.0 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 ORF27271 - 0.011 15.5 0.0 0.026 14.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 ORF27271 - 0.013 14.5 0.0 0.022 13.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein ATPase_2 PF01637.18 ORF27271 - 0.013 15.4 0.1 0.028 14.3 0.0 1.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_28 PF13521.6 ORF27271 - 0.015 15.6 0.2 0.071 13.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF27271 - 0.02 15.4 0.2 0.077 13.5 0.0 1.9 2 0 0 2 2 2 0 ABC transporter AAA_14 PF13173.6 ORF27271 - 0.021 14.8 0.4 0.12 12.4 0.0 2.3 2 1 1 3 3 3 0 AAA domain SRPRB PF09439.10 ORF27271 - 0.026 13.9 0.0 0.062 12.7 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_19 PF13245.6 ORF27271 - 0.027 14.8 0.2 0.065 13.6 0.2 1.9 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF27271 - 0.048 12.9 0.0 0.088 12.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin DAP3 PF10236.9 ORF27271 - 0.092 11.9 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 Viral_helicase1 PF01443.18 ORF27271 - 0.093 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_33 PF13671.6 ORF27271 - 0.094 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF27271 - 0.099 12.5 0.0 0.21 11.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain TPR_9 PF13371.6 ORF27271 - 0.11 12.7 1.8 0.22 11.7 1.8 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat AAA_18 PF13238.6 ORF27271 - 0.12 12.9 0.0 0.29 11.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF27271 - 0.15 11.8 0.1 0.44 10.3 0.0 1.8 2 0 0 2 2 1 0 P-loop containing region of AAA domain A_deaminase PF00962.22 ORF26012 - 3e-42 145.1 0.0 6.6e-41 140.7 0.0 2.0 1 1 0 1 1 1 1 Adenosine/AMP deaminase Gp45_2 PF17470.2 ORF24618 - 0.028 14.4 0.8 2 8.5 0.1 2.6 2 0 0 2 2 2 0 Phage gene product 45.2 GreA_GreB_N PF03449.15 ORF24618 - 0.097 12.8 0.3 14 5.9 0.1 2.4 2 0 0 2 2 2 0 Transcription elongation factor, N-terminal Acetyltransf_16 PF05301.11 ORF2439 - 1.3e-18 67.4 0.9 2.2e-18 66.6 0.9 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Rep_fac-A_C PF08646.10 ORF2439 - 0.078 12.7 0.3 0.16 11.7 0.3 1.5 1 0 0 1 1 1 0 Replication factor-A C terminal domain tRNA-synt_1g PF09334.11 ORF21699 - 4e-60 203.6 0.0 5.2e-60 203.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 ORF21699 - 4.2e-15 55.0 0.2 3.1e-11 42.3 0.0 2.1 1 1 1 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 ORF21699 - 0.0014 18.1 0.0 0.0022 17.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 ORF21699 - 0.08 12.9 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA PseudoU_synth_2 PF00849.22 ORF20699 - 1e-17 64.7 0.0 1.8e-17 63.9 0.0 1.4 1 1 0 1 1 1 1 RNA pseudouridylate synthase Na_H_antiporter PF03553.14 ORF1853 - 1.4e-38 132.9 11.5 8.4e-33 113.9 7.7 2.1 2 0 0 2 2 2 2 Na+/H+ antiporter family SMI1_KNR4 PF09346.10 ORF17225 - 8.2e-06 26.2 0.0 1.6e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 SMI1 / KNR4 family (SUKH-1) SUKH_5 PF14567.6 ORF17225 - 0.013 15.2 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall SUKH_6 PF14568.6 ORF17225 - 0.11 13.0 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall Abhydro_lipase PF04083.16 ORF14260 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF14260 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold DUF4239 PF14023.6 ORF1322 - 0.039 13.7 0.3 0.12 12.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4239) A_deaminase PF00962.22 ORF10252 - 3e-42 145.1 0.0 6.6e-41 140.7 0.0 2.0 1 1 0 1 1 1 1 Adenosine/AMP deaminase EIF_2_alpha PF07541.12 NODE_14536_length_1167_cov_10.916961_g10944_i0reverse_frame_1 - 0.042 14.0 0.0 0.11 12.6 0.0 1.6 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 2 alpha subunit AIM3 PF17096.5 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 0.078 13.9 1.0 0.078 13.9 1.0 1.9 2 0 0 2 2 2 0 Altered inheritance of mitochondria protein 3 Med15 PF09606.10 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 0.11 11.2 11.9 0.14 10.9 11.9 1.1 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal Presenilin PF01080.17 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 0.2 10.4 0.9 0.26 10.0 0.9 1.1 1 0 0 1 1 1 0 Presenilin Pex14_N PF04695.13 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 0.47 11.1 8.8 1.6 9.4 5.3 2.3 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region oligo_HPY PF08352.12 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 0.6 10.7 0.0 0.6 10.7 0.0 2.1 2 0 0 2 2 2 0 Oligopeptide/dipeptide transporter, C-terminal region DUF2722 PF10846.8 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 2.3 7.0 15.4 3.3 6.6 15.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) TFIIA PF03153.13 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 2.4 8.0 14.9 3.7 7.4 14.9 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit eIF-3_zeta PF05091.12 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 6.5 5.6 11.5 9.3 5.1 11.5 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Aa_trans PF01490.18 ORF9990 - 4.9e-29 101.3 17.7 5.8e-29 101.0 17.7 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF2976 PF11190.8 ORF9990 - 0.7 9.7 4.4 0.86 9.5 0.3 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2976) Aldedh PF00171.22 ORF83419 - 2.6e-152 507.5 0.1 3e-152 507.4 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 ORF83419 - 0.21 11.0 0.0 1.7 8.0 0.0 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1487) Melibiase_2 PF16499.5 ORF82489 - 9.6e-124 412.2 2.4 1.2e-123 411.9 2.4 1.1 1 0 0 1 1 1 1 Alpha galactosidase A Melibiase_C PF17801.1 ORF82489 - 7.3e-09 35.6 0.3 2.6e-08 33.8 0.0 2.0 2 0 0 2 2 2 1 Alpha galactosidase C-terminal beta sandwich domain Melibiase_2_C PF17450.2 ORF82489 - 9.4e-06 25.8 0.0 1.7e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 Alpha galactosidase A C-terminal beta sandwich domain Melibiase PF02065.18 ORF82489 - 0.0035 16.3 0.0 0.0064 15.5 0.0 1.3 1 0 0 1 1 1 1 Melibiase Glyco_hydro_97 PF10566.9 ORF82489 - 0.066 12.5 0.0 0.14 11.4 0.0 1.4 2 0 0 2 2 2 0 Glycoside hydrolase 97 Abhydro_lipase PF04083.16 ORF70853 - 6.4e-18 64.1 0.0 1.2e-17 63.2 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF70853 - 0.00073 19.3 0.3 0.0013 18.4 0.1 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold p450 PF00067.22 ORF65376 - 1.6e-49 169.0 0.0 9.1e-47 159.8 0.0 2.0 2 0 0 2 2 2 2 Cytochrome P450 UCH PF00443.29 ORF60683 - 3.4e-22 79.2 0.0 4.8e-22 78.7 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF60683 - 6.4e-07 29.3 0.0 1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Kelch_3 PF13415.6 ORF5431 - 3.1e-24 84.7 11.7 7.1e-07 29.4 0.1 6.6 7 0 0 7 7 7 4 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF5431 - 3.3e-23 81.4 11.1 1.4e-06 28.2 0.0 6.6 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF5431 - 8.9e-19 67.1 9.6 6.6e-07 29.4 0.0 6.8 6 1 1 7 7 7 3 Kelch motif Kelch_1 PF01344.25 ORF5431 - 2.1e-17 62.4 10.4 4.3e-09 35.8 0.0 5.4 5 0 0 5 5 5 4 Kelch motif Kelch_5 PF13854.6 ORF5431 - 1.1e-16 60.4 0.4 9.5e-08 31.9 0.0 5.3 5 0 0 5 5 5 2 Kelch motif Kelch_2 PF07646.15 ORF5431 - 6.7e-08 32.2 8.5 8.4e-05 22.4 0.0 5.4 6 1 0 6 6 6 2 Kelch motif RAG2 PF03089.14 ORF5431 - 0.012 14.7 0.0 0.16 10.9 0.0 2.5 2 1 1 3 3 3 0 Recombination activating protein 2 Pentapeptide_4 PF13599.6 ORF53393 - 0.059 13.5 12.7 4 7.7 0.0 4.9 2 2 3 5 5 5 0 Pentapeptide repeats (9 copies) Nucleotid_trans PF03407.16 ORF53116 - 2.5e-08 34.2 0.1 7.2e-08 32.7 0.0 1.7 2 1 1 3 3 3 1 Nucleotide-diphospho-sugar transferase Phage-MuB_C PF09077.11 ORF53116 - 0.064 13.1 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 Mu B transposition protein, C terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks29.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks29.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks29.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks29.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LuxT_C PF18285.1 ORF40378 - 0.0083 16.6 0.1 0.075 13.6 0.1 2.8 1 0 0 1 1 1 1 Tetracycline repressor LuxT C-terminal domain Defensin_like PF10868.8 ORF40378 - 8 7.3 8.3 27 5.6 0.5 2.5 1 1 1 2 2 2 0 Cysteine-rich antifungal protein 2, defensin-like Inhibitor_I53 PF11714.8 ORF40378 - 9.6 6.5 7.7 2.8 8.2 2.4 3.0 2 0 0 2 2 2 0 Thrombin inhibitor Madanin LuxT_C PF18285.1 ORF36937 - 0.0083 16.6 0.1 0.075 13.6 0.1 2.8 1 0 0 1 1 1 1 Tetracycline repressor LuxT C-terminal domain Defensin_like PF10868.8 ORF36937 - 8 7.3 8.3 27 5.6 0.5 2.5 1 1 1 2 2 2 0 Cysteine-rich antifungal protein 2, defensin-like Inhibitor_I53 PF11714.8 ORF36937 - 9.6 6.5 7.7 2.8 8.2 2.4 3.0 2 0 0 2 2 2 0 Thrombin inhibitor Madanin Ion_trans PF00520.31 ORF92215 - 1.2e-08 34.5 24.8 1.2e-08 34.5 24.8 3.2 3 1 0 3 3 3 1 Ion transport protein YajC PF02699.15 ORF92215 - 0.3 11.0 1.9 0.74 9.7 0.1 2.7 2 0 0 2 2 2 0 Preprotein translocase subunit EF-hand_1 PF00036.32 ORF67084 - 0.00033 20.0 1.5 0.0016 17.9 0.3 2.9 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF67084 - 0.0018 18.6 0.2 0.0018 18.6 0.2 4.4 4 0 0 4 4 4 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF67084 - 0.0065 16.3 1.2 0.054 13.4 0.1 3.2 3 1 0 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 ORF67084 - 0.0076 15.7 1.1 0.017 14.6 0.1 2.2 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF67084 - 0.014 15.3 0.7 0.12 12.3 0.7 2.7 1 0 0 1 1 1 0 EF-hand domain pair ABC_tran PF00005.27 ORF28170 - 5.7e-69 230.9 0.2 6.5e-36 123.9 0.0 2.7 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 ORF28170 - 3.7e-63 213.8 18.5 2.7e-38 132.2 2.5 2.3 2 0 0 2 2 2 2 ABC transporter transmembrane region SMC_N PF02463.19 ORF28170 - 3.2e-15 56.2 0.6 8.1e-06 25.4 0.0 3.5 3 0 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF28170 - 2e-10 41.4 0.4 0.0012 19.3 0.3 2.9 3 1 0 3 3 2 2 AAA ATPase domain AAA_22 PF13401.6 ORF28170 - 1.1e-08 35.4 2.4 0.011 16.0 0.4 4.5 4 1 0 4 4 3 2 AAA domain AAA_29 PF13555.6 ORF28170 - 1.5e-08 34.3 0.3 0.0003 20.4 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF28170 - 1.7e-07 31.3 0.7 0.0044 17.0 0.0 2.7 3 0 0 3 3 2 2 RsgA GTPase AAA_15 PF13175.6 ORF28170 - 8.2e-07 29.1 9.5 0.0005 19.9 7.6 3.1 2 1 0 2 2 2 2 AAA ATPase domain AAA_5 PF07728.14 ORF28170 - 2.5e-06 27.5 0.4 0.092 12.8 0.0 3.8 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 ORF28170 - 8.9e-06 25.1 0.1 0.088 12.1 0.0 2.7 2 0 0 2 2 2 2 Zeta toxin AAA_25 PF13481.6 ORF28170 - 2.2e-05 24.1 0.7 0.39 10.3 0.0 3.5 3 0 0 3 3 3 1 AAA domain DUF815 PF05673.13 ORF28170 - 2.3e-05 23.7 0.0 0.015 14.5 0.0 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF815) SbcCD_C PF13558.6 ORF28170 - 2.6e-05 24.4 2.8 0.23 11.7 0.4 4.1 3 2 0 3 3 2 2 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 ORF28170 - 4.3e-05 23.5 2.1 0.14 11.9 0.1 3.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 ORF28170 - 7.7e-05 22.7 0.1 0.65 9.9 0.0 2.7 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_18 PF13238.6 ORF28170 - 8.5e-05 23.1 0.0 0.34 11.5 0.0 2.9 2 0 0 2 2 2 2 AAA domain ABC_ATPase PF09818.9 ORF28170 - 0.00023 20.1 1.2 0.038 12.8 0.0 3.1 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA PF00004.29 ORF28170 - 0.00026 21.4 4.4 5.8 7.3 0.4 4.7 3 2 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 ORF28170 - 0.00061 19.1 0.1 0.11 11.7 0.0 2.3 2 0 0 2 2 2 1 G-protein alpha subunit AAA_30 PF13604.6 ORF28170 - 0.001 18.8 0.6 0.38 10.4 0.0 3.4 3 1 0 3 3 3 1 AAA domain AAA_24 PF13479.6 ORF28170 - 0.0018 18.0 0.0 1.8 8.3 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 ORF28170 - 0.0022 18.0 0.3 3.6 7.6 0.0 3.7 2 1 1 3 3 3 1 AAA domain RNA_helicase PF00910.22 ORF28170 - 0.0027 18.1 0.7 3 8.3 0.0 3.1 3 0 0 3 3 2 1 RNA helicase AAA_7 PF12775.7 ORF28170 - 0.0034 16.9 0.1 2.7 7.5 0.0 2.6 2 0 0 2 2 2 1 P-loop containing dynein motor region PRK PF00485.18 ORF28170 - 0.0044 16.8 1.5 0.18 11.5 0.0 3.1 3 0 0 3 3 2 1 Phosphoribulokinase / Uridine kinase family Viral_helicase1 PF01443.18 ORF28170 - 0.0048 16.7 0.2 1.4 8.6 0.0 2.8 3 0 0 3 3 2 1 Viral (Superfamily 1) RNA helicase AAA_33 PF13671.6 ORF28170 - 0.0049 17.0 0.0 0.82 9.8 0.0 2.7 3 0 0 3 3 2 1 AAA domain MMR_HSR1 PF01926.23 ORF28170 - 0.0057 16.7 0.1 1.3 9.2 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP-synt_ab PF00006.25 ORF28170 - 0.012 15.3 0.0 0.76 9.4 0.0 2.6 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_23 PF13476.6 ORF28170 - 0.012 16.1 16.5 0.045 14.2 0.0 4.4 4 1 0 4 4 3 0 AAA domain TniB PF05621.11 ORF28170 - 0.018 14.5 0.8 9 5.7 0.1 3.9 4 0 0 4 4 4 0 Bacterial TniB protein DUF87 PF01935.17 ORF28170 - 0.029 14.5 4.0 1.6 8.7 0.1 3.5 4 0 0 4 4 4 0 Helicase HerA, central domain MeaB PF03308.16 ORF28170 - 0.039 12.9 0.2 3 6.8 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DEAD PF00270.29 ORF28170 - 0.049 13.4 1.4 2.6 7.8 0.1 3.3 3 1 0 3 3 3 0 DEAD/DEAH box helicase NB-ARC PF00931.22 ORF28170 - 0.11 11.7 0.1 13 4.8 0.0 2.6 2 0 0 2 2 2 0 NB-ARC domain NACHT PF05729.12 ORF28170 - 0.11 12.5 1.6 4.7 7.1 0.0 2.9 3 0 0 3 3 2 0 NACHT domain AAA_28 PF13521.6 ORF28170 - 0.14 12.4 0.2 31 4.8 0.0 3.4 3 0 0 3 3 3 0 AAA domain ATPase PF06745.13 ORF28170 - 0.28 10.5 3.1 8 5.7 0.0 3.1 3 0 0 3 3 3 0 KaiC NTPase_1 PF03266.15 ORF28170 - 0.39 10.6 1.7 6.8 6.6 0.0 3.1 4 0 0 4 4 3 0 NTPase CitMHS PF03600.16 ORF28170 - 2.5 7.2 7.7 0.23 10.6 0.4 2.4 2 1 0 2 2 2 0 Citrate transporter Mak16 PF04874.14 ORF28170 - 3.6 8.3 12.8 0.97 10.1 7.4 2.7 2 0 0 2 2 2 0 Mak16 protein C-terminal region TssN PF17555.2 ORF28170 - 3.6 6.9 14.4 1.5 8.2 0.8 3.4 2 1 0 3 3 3 0 Type VI secretion system, TssN ABC_tran PF00005.27 ORF104561 - 5.7e-69 230.9 0.2 6.5e-36 123.9 0.0 2.7 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 ORF104561 - 3.7e-63 213.8 18.5 2.7e-38 132.2 2.5 2.3 2 0 0 2 2 2 2 ABC transporter transmembrane region SMC_N PF02463.19 ORF104561 - 3.2e-15 56.2 0.6 8.1e-06 25.4 0.0 3.5 3 0 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF104561 - 2e-10 41.4 0.4 0.0012 19.3 0.3 2.9 3 1 0 3 3 2 2 AAA ATPase domain AAA_22 PF13401.6 ORF104561 - 1.1e-08 35.4 2.4 0.011 16.0 0.4 4.5 4 1 0 4 4 3 2 AAA domain AAA_29 PF13555.6 ORF104561 - 1.5e-08 34.3 0.3 0.0003 20.4 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF104561 - 1.7e-07 31.3 0.7 0.0044 17.0 0.0 2.7 3 0 0 3 3 2 2 RsgA GTPase AAA_15 PF13175.6 ORF104561 - 8.2e-07 29.1 9.5 0.0005 19.9 7.6 3.1 2 1 0 2 2 2 2 AAA ATPase domain AAA_5 PF07728.14 ORF104561 - 2.5e-06 27.5 0.4 0.092 12.8 0.0 3.8 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 ORF104561 - 8.9e-06 25.1 0.1 0.088 12.1 0.0 2.7 2 0 0 2 2 2 2 Zeta toxin AAA_25 PF13481.6 ORF104561 - 2.2e-05 24.1 0.7 0.39 10.3 0.0 3.5 3 0 0 3 3 3 1 AAA domain DUF815 PF05673.13 ORF104561 - 2.3e-05 23.7 0.0 0.015 14.5 0.0 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF815) SbcCD_C PF13558.6 ORF104561 - 2.6e-05 24.4 2.8 0.23 11.7 0.4 4.1 3 2 0 3 3 2 2 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 ORF104561 - 4.3e-05 23.5 2.1 0.14 11.9 0.1 3.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 ORF104561 - 7.7e-05 22.7 0.1 0.65 9.9 0.0 2.7 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_18 PF13238.6 ORF104561 - 8.5e-05 23.1 0.0 0.34 11.5 0.0 2.9 2 0 0 2 2 2 2 AAA domain ABC_ATPase PF09818.9 ORF104561 - 0.00023 20.1 1.2 0.038 12.8 0.0 3.1 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA PF00004.29 ORF104561 - 0.00026 21.4 4.4 5.8 7.3 0.4 4.7 3 2 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 ORF104561 - 0.00061 19.1 0.1 0.11 11.7 0.0 2.3 2 0 0 2 2 2 1 G-protein alpha subunit AAA_30 PF13604.6 ORF104561 - 0.001 18.8 0.6 0.38 10.4 0.0 3.4 3 1 0 3 3 3 1 AAA domain AAA_24 PF13479.6 ORF104561 - 0.0018 18.0 0.0 1.8 8.3 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 ORF104561 - 0.0022 18.0 0.3 3.6 7.6 0.0 3.7 2 1 1 3 3 3 1 AAA domain RNA_helicase PF00910.22 ORF104561 - 0.0027 18.1 0.7 3 8.3 0.0 3.1 3 0 0 3 3 2 1 RNA helicase AAA_7 PF12775.7 ORF104561 - 0.0034 16.9 0.1 2.7 7.5 0.0 2.6 2 0 0 2 2 2 1 P-loop containing dynein motor region PRK PF00485.18 ORF104561 - 0.0044 16.8 1.5 0.18 11.5 0.0 3.1 3 0 0 3 3 2 1 Phosphoribulokinase / Uridine kinase family Viral_helicase1 PF01443.18 ORF104561 - 0.0048 16.7 0.2 1.4 8.6 0.0 2.8 3 0 0 3 3 2 1 Viral (Superfamily 1) RNA helicase AAA_33 PF13671.6 ORF104561 - 0.0049 17.0 0.0 0.82 9.8 0.0 2.7 3 0 0 3 3 2 1 AAA domain MMR_HSR1 PF01926.23 ORF104561 - 0.0057 16.7 0.1 1.3 9.2 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP-synt_ab PF00006.25 ORF104561 - 0.012 15.3 0.0 0.76 9.4 0.0 2.6 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_23 PF13476.6 ORF104561 - 0.012 16.1 16.5 0.045 14.2 0.0 4.4 4 1 0 4 4 3 0 AAA domain TniB PF05621.11 ORF104561 - 0.018 14.5 0.8 9 5.7 0.1 3.9 4 0 0 4 4 4 0 Bacterial TniB protein DUF87 PF01935.17 ORF104561 - 0.029 14.5 4.0 1.6 8.7 0.1 3.5 4 0 0 4 4 4 0 Helicase HerA, central domain MeaB PF03308.16 ORF104561 - 0.039 12.9 0.2 3 6.8 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DEAD PF00270.29 ORF104561 - 0.049 13.4 1.4 2.6 7.8 0.1 3.3 3 1 0 3 3 3 0 DEAD/DEAH box helicase NB-ARC PF00931.22 ORF104561 - 0.11 11.7 0.1 13 4.8 0.0 2.6 2 0 0 2 2 2 0 NB-ARC domain NACHT PF05729.12 ORF104561 - 0.11 12.5 1.6 4.7 7.1 0.0 2.9 3 0 0 3 3 2 0 NACHT domain AAA_28 PF13521.6 ORF104561 - 0.14 12.4 0.2 31 4.8 0.0 3.4 3 0 0 3 3 3 0 AAA domain ATPase PF06745.13 ORF104561 - 0.28 10.5 3.1 8 5.7 0.0 3.1 3 0 0 3 3 3 0 KaiC NTPase_1 PF03266.15 ORF104561 - 0.39 10.6 1.7 6.8 6.6 0.0 3.1 4 0 0 4 4 3 0 NTPase CitMHS PF03600.16 ORF104561 - 2.5 7.2 7.7 0.23 10.6 0.4 2.4 2 1 0 2 2 2 0 Citrate transporter Mak16 PF04874.14 ORF104561 - 3.6 8.3 12.8 0.97 10.1 7.4 2.7 2 0 0 2 2 2 0 Mak16 protein C-terminal region TssN PF17555.2 ORF104561 - 3.6 6.9 14.4 1.5 8.2 0.8 3.4 2 1 0 3 3 3 0 Type VI secretion system, TssN AAA_8 PF12780.7 ORF97811 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF97811 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF97811 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF97811 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF97811 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF97811 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF97811 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF97811 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF97811 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF97811 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF97811 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF97811 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF97811 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF97811 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF97811 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF97811 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal AAA_8 PF12780.7 ORF78587 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF78587 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF78587 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF78587 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF78587 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF78587 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF78587 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF78587 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF78587 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF78587 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF78587 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF78587 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF78587 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF78587 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF78587 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF78587 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal AAA_8 PF12780.7 ORF53957 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF53957 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF53957 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF53957 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF53957 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF53957 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF53957 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF53957 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF53957 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF53957 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF53957 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF53957 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF53957 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF53957 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF53957 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF53957 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal AAA_8 PF12780.7 ORF50024 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF50024 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF50024 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF50024 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF50024 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF50024 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF50024 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF50024 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF50024 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF50024 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF50024 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF50024 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF50024 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF50024 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF50024 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF50024 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal AAA_8 PF12780.7 ORF49798 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF49798 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF49798 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF49798 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF49798 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF49798 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF49798 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF49798 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF49798 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF49798 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF49798 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF49798 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF49798 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF49798 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF49798 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF49798 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal AAA_8 PF12780.7 ORF42131 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF42131 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF42131 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF42131 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF42131 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF42131 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF42131 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF42131 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF42131 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF42131 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF42131 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF42131 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF42131 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF42131 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF42131 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF42131 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal AAA_8 PF12780.7 ORF33923 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF33923 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF33923 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF33923 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF33923 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF33923 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF33923 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF33923 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF33923 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF33923 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF33923 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF33923 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF33923 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF33923 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF33923 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF33923 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal AAA_8 PF12780.7 ORF19669 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF19669 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF19669 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF19669 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF19669 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF19669 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF19669 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF19669 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF19669 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF19669 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF19669 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF19669 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF19669 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF19669 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF19669 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF19669 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal AAA_8 PF12780.7 ORF12353 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF12353 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF12353 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF12353 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF12353 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF12353 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF12353 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF12353 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF12353 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF12353 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF12353 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF12353 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF12353 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF12353 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF12353 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF12353 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal AAA_8 PF12780.7 ORF100243 - 2.9e-98 328.3 0.8 4.5e-97 324.4 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF100243 - 2.4e-64 217.5 16.0 4e-64 216.8 16.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF100243 - 1.5e-62 210.3 0.7 1.1e-61 207.5 0.2 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF100243 - 9.8e-23 80.3 0.2 4e-22 78.3 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF100243 - 4.8e-21 75.2 0.9 2.1e-20 73.1 0.9 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF100243 - 1.6e-12 47.6 0.0 0.00065 19.7 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) LPP PF04728.13 ORF100243 - 0.0027 18.1 3.1 0.017 15.5 3.1 2.4 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TsaE PF02367.17 ORF100243 - 0.0034 17.4 0.4 0.012 15.6 0.1 2.1 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 ORF100243 - 0.025 15.0 0.0 0.12 12.8 0.0 2.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF100243 - 0.043 13.6 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF100243 - 0.059 13.7 5.2 1.9 8.8 0.0 4.1 3 1 1 4 4 4 0 AAA ATPase domain Mg_chelatase PF01078.21 ORF100243 - 0.062 12.7 0.0 5.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 ORF100243 - 0.1 12.8 0.0 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF100243 - 0.37 11.3 2.0 7 7.2 0.0 3.5 3 0 0 3 3 3 0 ABC transporter DXP_reductoisom PF02670.16 ORF100243 - 1.3 9.7 5.2 13 6.6 2.0 3.2 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CASP_C PF08172.12 ORF100243 - 3.7 6.8 9.9 4.6 6.5 2.4 2.4 2 0 0 2 2 2 0 CASP C terminal Pkinase PF00069.25 ORF5975 - 3e-26 92.4 0.0 4.5e-26 91.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Patched PF02460.18 ORF5975 - 1.4e-11 43.3 0.4 2.2e-11 42.7 0.4 1.2 1 0 0 1 1 1 1 Patched family EF-hand_1 PF00036.32 ORF5975 - 5.2e-11 41.3 0.3 9e-06 24.9 0.1 3.6 3 0 0 3 3 3 2 EF hand Pkinase_Tyr PF07714.17 ORF5975 - 7.5e-11 41.8 0.0 1.2e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF5975 - 3.1e-10 40.3 0.0 3.6e-09 37.0 0.0 2.4 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF5975 - 4.5e-09 35.5 0.3 1.6e-05 24.4 0.1 3.1 3 0 0 3 3 3 2 EF-hand domain Sterol-sensing PF12349.8 ORF5975 - 9e-09 35.3 5.8 2e-08 34.2 5.8 1.6 1 0 0 1 1 1 1 Sterol-sensing domain of SREBP cleavage-activation EF-hand_5 PF13202.6 ORF5975 - 1.4e-05 24.3 0.3 9.5e-05 21.7 0.2 2.3 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF5975 - 3e-05 23.8 0.1 0.7 9.8 0.1 3.4 3 1 1 4 4 4 2 EF-hand domain pair APH PF01636.23 ORF5975 - 0.007 16.3 0.3 0.017 15.1 0.0 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF5975 - 0.011 14.5 0.0 0.02 13.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase EF-hand_11 PF08976.11 ORF5975 - 0.039 14.8 0.0 0.091 13.6 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain MMPL PF03176.15 ORF5975 - 1.1 8.1 4.1 1.9 7.3 4.1 1.3 1 0 0 1 1 1 0 MMPL family ASH PF15780.5 ORF98358 - 1.9e-31 108.2 12.4 0.00026 21.1 0.0 10.3 11 0 0 11 11 11 7 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Motile_Sperm PF00635.26 ORF98358 - 1.7e-13 50.4 15.9 9.6e-05 22.2 0.2 7.3 6 0 0 6 6 6 3 MSP (Major sperm protein) domain DUF1573 PF07610.11 ORF98358 - 2.7e-09 37.0 5.8 0.0015 18.6 0.0 7.4 7 1 1 8 8 8 1 Protein of unknown function (DUF1573) MYCBPAP PF14646.6 ORF98358 - 4e-05 22.7 0.8 0.7 8.8 0.1 3.9 3 2 1 4 4 4 2 MYCBP-associated protein family TMEM131_like PF12371.8 ORF98358 - 0.00024 21.3 6.0 0.85 9.9 0.0 6.0 6 0 0 6 6 6 1 Transmembrane protein 131-like PapD-like PF14874.6 ORF98358 - 0.00067 19.8 0.0 6.2 7.0 0.0 4.0 4 0 0 4 4 4 2 Flagellar-associated PapD-like FixG_C PF11614.8 ORF98358 - 0.019 15.2 3.6 3.9 7.7 0.1 4.9 5 0 0 5 5 5 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF4402 PF14352.6 ORF98358 - 0.086 13.5 0.2 0.49 11.0 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4402) DUF5001 PF16392.5 ORF98358 - 0.33 10.9 13.0 2.7 8.0 0.1 6.4 7 0 0 7 7 7 0 Ig-like domain DUF1735 PF08522.10 ORF98358 - 7.2 7.2 8.3 5.7 7.6 0.1 4.8 5 1 0 5 5 5 0 Domain of unknown function (DUF1735) AAA_30 PF13604.6 ORF52708 - 5.9e-15 55.5 0.0 1.2e-14 54.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF52708 - 6.5e-07 29.3 0.5 0.0096 15.7 0.0 2.7 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase HNH PF01844.23 ORF52708 - 5.8e-06 26.4 0.0 1.2e-05 25.4 0.0 1.6 1 0 0 1 1 1 1 HNH endonuclease AAA_19 PF13245.6 ORF52708 - 6.4e-05 23.3 0.3 0.0038 17.6 0.3 2.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF52708 - 0.00024 21.5 0.1 0.0011 19.4 0.1 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 ORF52708 - 0.00033 20.5 0.3 0.045 13.5 0.1 2.2 1 1 1 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF52708 - 0.0005 19.5 0.1 0.00089 18.7 0.1 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI HNH_5 PF14279.6 ORF52708 - 0.0013 18.6 0.1 0.0027 17.5 0.1 1.5 1 0 0 1 1 1 1 HNH endonuclease AAA PF00004.29 ORF52708 - 0.0017 18.8 0.0 0.0035 17.8 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PIF1 PF05970.14 ORF52708 - 0.0037 16.5 0.0 0.073 12.2 0.0 2.1 2 0 0 2 2 2 1 PIF1-like helicase AAA_22 PF13401.6 ORF52708 - 0.0047 17.2 0.2 0.024 14.9 0.1 2.4 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 ORF52708 - 0.01 15.3 0.0 0.025 14.0 0.0 1.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_33 PF13671.6 ORF52708 - 0.011 15.9 0.0 0.028 14.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 ORF52708 - 0.012 14.8 0.0 0.022 14.0 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain ATPase PF06745.13 ORF52708 - 0.026 13.9 0.0 0.042 13.2 0.0 1.2 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 ORF52708 - 0.026 14.2 0.0 0.052 13.3 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 ORF52708 - 0.066 12.4 0.1 0.11 11.8 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 ORF52708 - 0.082 12.8 0.1 0.18 11.7 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 ORF52708 - 0.086 12.8 0.0 0.3 11.1 0.0 2.0 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF52708 - 0.097 13.2 0.1 0.29 11.7 0.1 1.8 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF52708 - 0.15 12.1 0.0 0.32 11.0 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TIP49 PF06068.13 ORF52708 - 0.28 10.3 0.0 0.5 9.5 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_30 PF13604.6 ORF109604 - 5.9e-15 55.5 0.0 1.2e-14 54.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF109604 - 6.5e-07 29.3 0.5 0.0096 15.7 0.0 2.7 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase HNH PF01844.23 ORF109604 - 5.8e-06 26.4 0.0 1.2e-05 25.4 0.0 1.6 1 0 0 1 1 1 1 HNH endonuclease AAA_19 PF13245.6 ORF109604 - 6.4e-05 23.3 0.3 0.0038 17.6 0.3 2.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF109604 - 0.00024 21.5 0.1 0.0011 19.4 0.1 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 ORF109604 - 0.00033 20.5 0.3 0.045 13.5 0.1 2.2 1 1 1 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF109604 - 0.0005 19.5 0.1 0.00089 18.7 0.1 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI HNH_5 PF14279.6 ORF109604 - 0.0013 18.6 0.1 0.0027 17.5 0.1 1.5 1 0 0 1 1 1 1 HNH endonuclease AAA PF00004.29 ORF109604 - 0.0017 18.8 0.0 0.0035 17.8 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PIF1 PF05970.14 ORF109604 - 0.0037 16.5 0.0 0.073 12.2 0.0 2.1 2 0 0 2 2 2 1 PIF1-like helicase AAA_22 PF13401.6 ORF109604 - 0.0047 17.2 0.2 0.024 14.9 0.1 2.4 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 ORF109604 - 0.01 15.3 0.0 0.025 14.0 0.0 1.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_33 PF13671.6 ORF109604 - 0.011 15.9 0.0 0.028 14.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 ORF109604 - 0.012 14.8 0.0 0.022 14.0 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain ATPase PF06745.13 ORF109604 - 0.026 13.9 0.0 0.042 13.2 0.0 1.2 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 ORF109604 - 0.026 14.2 0.0 0.052 13.3 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 ORF109604 - 0.066 12.4 0.1 0.11 11.8 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 ORF109604 - 0.082 12.8 0.1 0.18 11.7 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 ORF109604 - 0.086 12.8 0.0 0.3 11.1 0.0 2.0 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF109604 - 0.097 13.2 0.1 0.29 11.7 0.1 1.8 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF109604 - 0.15 12.1 0.0 0.32 11.0 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TIP49 PF06068.13 ORF109604 - 0.28 10.3 0.0 0.5 9.5 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain ISET-FN3_linker PF16625.5 ORF52704 - 0.043 14.3 1.2 0.17 12.5 1.2 2.1 1 0 0 1 1 1 0 Unstructured linking region I-set and fnIII on Brother of CDO ISET-FN3_linker PF16625.5 ORF109600 - 0.043 14.3 1.2 0.17 12.5 1.2 2.1 1 0 0 1 1 1 0 Unstructured linking region I-set and fnIII on Brother of CDO DUF2854 PF11016.8 ORF32557 - 0.051 13.5 1.2 0.19 11.6 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2854) DUF2576 PF10845.8 ORF32557 - 0.52 9.9 2.7 38 4.0 0.2 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2576) SipA_VBS PF17985.1 ORF32557 - 2 8.5 4.0 3 7.9 0.6 3.2 3 0 0 3 3 3 0 SipA vinculin binding site DASH_Dam1 PF08653.10 ORF32557 - 4.5 7.1 14.9 39 4.1 0.6 6.5 2 2 4 6 6 6 0 DASH complex subunit Dam1 BCSC_C PF05420.11 ORF10138 - 8.7e-118 393.3 12.4 1.8e-117 392.3 12.4 1.6 1 0 0 1 1 1 1 Cellulose synthase operon protein C C-terminus (BCSC_C) TPR_19 PF14559.6 ORF10138 - 1.2e-32 112.2 55.7 7.1e-07 29.6 7.9 11.3 8 2 4 12 12 12 8 Tetratricopeptide repeat TPR_2 PF07719.17 ORF10138 - 8.8e-18 62.9 31.6 9.2e-05 22.3 0.2 11.8 12 0 0 12 12 12 5 Tetratricopeptide repeat TPR_16 PF13432.6 ORF10138 - 3.2e-17 62.9 73.6 1.1e-06 29.2 4.4 11.0 11 1 1 12 12 12 5 Tetratricopeptide repeat TPR_14 PF13428.6 ORF10138 - 3.1e-16 58.7 51.6 0.017 15.9 0.4 14.1 10 4 4 14 14 14 6 Tetratricopeptide repeat TPR_8 PF13181.6 ORF10138 - 1.1e-12 47.0 12.5 1.1e-05 25.2 0.1 9.7 11 0 0 11 11 11 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF10138 - 8.4e-11 42.0 37.8 0.0064 16.8 0.3 10.0 9 1 0 10 10 10 4 Tetratricopeptide repeat TPR_7 PF13176.6 ORF10138 - 5e-10 38.7 21.7 0.00019 21.3 0.1 8.7 10 0 0 10 10 9 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF10138 - 9.7e-09 34.7 21.1 0.00011 21.8 0.1 7.9 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_20 PF14561.6 ORF10138 - 5.2e-07 29.9 32.9 0.00025 21.3 0.8 8.1 7 2 2 9 9 9 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF10138 - 0.00029 20.4 28.1 0.011 15.5 0.2 8.4 9 1 1 10 10 10 3 TPR repeat TPR_15 PF13429.6 ORF10138 - 0.0003 20.1 48.7 0.17 11.1 0.8 6.9 2 1 4 7 7 7 3 Tetratricopeptide repeat RPN7 PF10602.9 ORF10138 - 0.00035 20.3 1.5 0.14 11.8 0.0 3.9 4 1 1 5 5 4 1 26S proteasome subunit RPN7 BTAD PF03704.17 ORF10138 - 0.0011 19.5 0.5 0.0011 19.5 0.5 6.9 6 1 2 8 8 8 1 Bacterial transcriptional activator domain TPR_17 PF13431.6 ORF10138 - 0.0055 17.0 22.3 0.031 14.7 0.1 8.0 10 0 0 10 10 7 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF10138 - 0.0083 16.3 36.5 0.081 13.1 0.2 9.5 5 4 3 9 9 9 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF10138 - 0.028 15.0 52.7 1.5 9.6 0.4 12.0 12 1 0 12 12 12 0 Tetratricopeptide repeat TOM20_plant PF06552.12 ORF10138 - 0.066 13.0 0.4 3.2 7.5 0.0 3.0 1 1 2 3 3 3 0 Plant specific mitochondrial import receptor subunit TOM20 TPR_10 PF13374.6 ORF10138 - 0.072 13.0 43.3 0.07 13.0 1.1 9.9 10 0 0 10 10 10 0 Tetratricopeptide repeat E1-E2_ATPase PF00122.20 ORF79531 - 1e-46 158.7 2.4 7.4e-46 156.0 1.0 2.4 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 ORF79531 - 8.9e-37 126.6 0.0 8.9e-37 126.6 0.0 2.7 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF79531 - 3.1e-19 70.1 0.0 9.4e-10 39.1 0.0 2.6 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 ORF79531 - 4.4e-14 51.9 0.0 1.1e-13 50.6 0.0 1.8 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 ORF79531 - 5.1e-12 45.7 0.1 1.2e-11 44.5 0.1 1.7 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 ORF79531 - 2.1e-07 30.9 7.8 1.1e-05 25.3 1.8 2.9 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase Bac_rhamnosid_N PF08531.10 ORF79531 - 0.013 15.3 0.0 0.027 14.3 0.0 1.4 1 0 0 1 1 1 0 Alpha-L-rhamnosidase N-terminal domain THF_DHG_CYH PF00763.23 ORF79531 - 0.068 13.4 0.1 0.19 12.0 0.1 1.7 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Glyco_hydro_67N PF03648.14 ORF84778 - 0.11 12.8 2.6 0.55 10.5 2.6 2.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 N-terminus Glyco_hydro_67N PF03648.14 ORF6285 - 0.11 12.8 2.6 0.55 10.5 2.6 2.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 N-terminus AAA_9 PF12781.7 ORF2870 - 3e-76 255.4 2.7 4.5e-76 254.8 1.8 1.8 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF2870 - 8e-53 179.6 0.2 1.8e-52 178.5 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF2870 - 4.9e-41 140.3 0.0 1.1e-40 139.1 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF2870 - 1.2e-26 93.1 0.0 1e-25 90.1 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain He_PIG PF05345.12 ORF58652 - 6.7e-22 77.4 65.1 2.7e-09 37.1 10.1 6.7 6 0 0 6 6 6 4 Putative Ig domain TMEM154 PF15102.6 ORF58652 - 1.3e-05 25.1 1.1 1.3e-05 25.1 1.1 3.9 4 1 0 4 4 3 1 TMEM154 protein family SID-1_RNA_chan PF13965.6 ORF58652 - 0.011 14.1 0.4 0.021 13.3 0.4 1.4 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF5122 PF17164.4 ORF58652 - 0.024 14.9 10.9 9.4 6.6 0.2 6.1 6 0 0 6 6 6 0 Domain of unknown function (DUF5122) beta-propeller LapA_dom PF06305.11 ORF58652 - 0.025 14.4 0.4 0.054 13.3 0.4 1.5 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF5305 PF17231.2 ORF58652 - 0.032 13.6 0.4 0.032 13.6 0.4 3.3 3 0 0 3 3 3 0 Family of unknown function (DUF5305) Cadherin_C_2 PF16492.5 ORF58652 - 0.04 14.6 0.1 2.4 9.0 0.0 3.7 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal EphA2_TM PF14575.6 ORF58652 - 0.069 14.0 0.0 0.069 14.0 0.0 2.6 3 1 0 3 3 1 0 Ephrin type-A receptor 2 transmembrane domain Shisa PF13908.6 ORF58652 - 0.5 10.6 0.0 0.5 10.6 0.0 2.9 3 0 0 3 3 3 0 Wnt and FGF inhibitory regulator Tmemb_9 PF05434.11 ORF58652 - 0.96 9.3 2.7 0.61 10.0 0.1 1.9 2 0 0 2 2 2 0 TMEM9 Cadherin_5 PF17892.1 ORF58652 - 1.7 8.6 38.0 0.16 12.0 2.5 5.7 3 1 2 5 5 5 0 Cadherin-like domain Vpu PF00558.19 ORF58652 - 3 7.7 9.9 0.036 13.8 1.1 2.2 2 0 0 2 2 2 0 Vpu protein Sun2_CC2 PF18580.1 ORF100083 - 0.012 15.8 2.3 0.035 14.3 2.3 1.8 1 0 0 1 1 1 0 SUN2 coiled coil domain 2 Glyco_hydro_31 PF01055.26 ORF77198 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF77198 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF77198 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Glyco_hydro_31 PF01055.26 ORF76836 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF76836 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF76836 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Glyco_hydro_31 PF01055.26 ORF19216 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF19216 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF19216 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Glyco_hydro_31 PF01055.26 ORF111062 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF111062 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF111062 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Glyco_hydro_31 PF01055.26 ORF104184 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF104184 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF104184 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AAA_30 PF13604.6 ORF21627 - 0.00032 20.5 0.5 0.0019 18.0 0.5 2.1 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF21627 - 0.00059 19.6 0.0 0.0035 17.1 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF21627 - 0.0012 19.2 0.5 0.36 11.1 0.3 2.8 2 1 1 3 3 3 1 AAA domain AAA PF00004.29 ORF21627 - 0.0068 16.8 0.0 0.024 15.1 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 ORF21627 - 0.0071 16.1 0.1 0.013 15.2 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_19 PF13245.6 ORF21627 - 0.023 15.0 1.6 1.6 9.1 0.3 2.4 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF21627 - 0.024 15.0 2.7 0.24 11.8 0.6 3.3 2 1 0 2 2 2 0 AAA ATPase domain Sigma54_activ_2 PF14532.6 ORF21627 - 0.041 14.0 0.1 0.099 12.8 0.1 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 ORF21627 - 0.042 13.1 0.0 0.23 10.7 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin Bac_DnaA PF00308.18 ORF21627 - 0.094 12.5 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial dnaA protein rve PF00665.26 ORF53197 - 6.1e-10 39.3 0.0 1.6e-09 38.0 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain RVT_2 PF07727.14 ORF53197 - 0.00024 20.8 0.0 0.00044 20.0 0.0 1.3 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Chlam_PMP PF02415.17 ORF88120 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF88120 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like zf_CCCH_4 PF18345.1 ORF85621 - 1.6e-12 47.0 16.3 1e-06 28.6 4.6 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF85621 - 8.3e-10 38.3 11.1 1.6e-05 24.7 1.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF85621 - 2.1e-08 33.8 12.0 0.00019 21.2 1.9 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF85621 - 5e-08 33.1 0.8 1.7e-07 31.4 0.8 1.9 1 0 0 1 1 1 1 Zinc-finger containing family Torus PF16131.5 ORF85621 - 2.2e-06 28.3 6.1 0.0096 16.6 0.5 2.8 1 1 1 2 2 2 2 Torus domain zf-CCCH_2 PF14608.6 ORF85621 - 0.009 16.5 12.1 0.54 10.8 2.0 2.7 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Chlam_PMP PF02415.17 ORF79888 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF79888 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF70726 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF70726 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like zf_CCCH_4 PF18345.1 ORF69376 - 1.6e-12 47.0 16.3 1e-06 28.6 4.6 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF69376 - 8.3e-10 38.3 11.1 1.6e-05 24.7 1.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF69376 - 2.1e-08 33.8 12.0 0.00019 21.2 1.9 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF69376 - 5e-08 33.1 0.8 1.7e-07 31.4 0.8 1.9 1 0 0 1 1 1 1 Zinc-finger containing family Torus PF16131.5 ORF69376 - 2.2e-06 28.3 6.1 0.0096 16.6 0.5 2.8 1 1 1 2 2 2 2 Torus domain zf-CCCH_2 PF14608.6 ORF69376 - 0.009 16.5 12.1 0.54 10.8 2.0 2.7 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Chlam_PMP PF02415.17 ORF69263 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF69263 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF55981 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF55981 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF45741 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF45741 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF44716 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF44716 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like zf_CCCH_4 PF18345.1 ORF41361 - 1.6e-12 47.0 16.3 1e-06 28.6 4.6 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF41361 - 8.3e-10 38.3 11.1 1.6e-05 24.7 1.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF41361 - 2.1e-08 33.8 12.0 0.00019 21.2 1.9 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF41361 - 5e-08 33.1 0.8 1.7e-07 31.4 0.8 1.9 1 0 0 1 1 1 1 Zinc-finger containing family Torus PF16131.5 ORF41361 - 2.2e-06 28.3 6.1 0.0096 16.6 0.5 2.8 1 1 1 2 2 2 2 Torus domain zf-CCCH_2 PF14608.6 ORF41361 - 0.009 16.5 12.1 0.54 10.8 2.0 2.7 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Chlam_PMP PF02415.17 ORF40093 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF40093 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF16633 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF16633 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF106153 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF106153 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like DUF4212 PF13937.6 ORF94541 - 0.0035 17.7 0.2 0.007 16.7 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4212) DUF4936 PF16290.5 ORF94541 - 1.5 9.5 8.8 0.48 11.1 0.2 4.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4936) Polyoma_coat2 PF00761.20 ORF94541 - 4.1 7.0 5.8 0.73 9.5 0.0 2.8 2 1 1 3 3 3 0 Polyomavirus coat protein DUF4212 PF13937.6 ORF86361 - 0.0035 17.7 0.2 0.007 16.7 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4212) DUF4936 PF16290.5 ORF86361 - 1.5 9.5 8.8 0.48 11.1 0.2 4.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4936) Polyoma_coat2 PF00761.20 ORF86361 - 4.1 7.0 5.8 0.73 9.5 0.0 2.8 2 1 1 3 3 3 0 Polyomavirus coat protein DUF4212 PF13937.6 ORF39486 - 0.0035 17.7 0.2 0.007 16.7 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4212) DUF4936 PF16290.5 ORF39486 - 1.5 9.5 8.8 0.48 11.1 0.2 4.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4936) Polyoma_coat2 PF00761.20 ORF39486 - 4.1 7.0 5.8 0.73 9.5 0.0 2.8 2 1 1 3 3 3 0 Polyomavirus coat protein AAA_30 PF13604.6 ORF104842 - 0.00031 20.5 0.5 0.0018 18.0 0.5 2.1 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF104842 - 0.00056 19.7 0.0 0.0034 17.1 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF104842 - 0.002 18.4 1.0 0.35 11.1 0.3 2.6 1 1 1 2 2 2 1 AAA domain DEAD PF00270.29 ORF104842 - 0.007 16.2 0.1 0.013 15.3 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA PF00004.29 ORF104842 - 0.0071 16.8 0.0 0.023 15.1 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 ORF104842 - 0.023 15.0 1.6 1.5 9.1 0.3 2.4 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF104842 - 0.025 15.0 2.8 0.24 11.8 0.6 3.3 2 1 0 2 2 2 0 AAA ATPase domain Sigma54_activ_2 PF14532.6 ORF104842 - 0.04 14.0 0.1 0.097 12.8 0.1 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 ORF104842 - 0.054 12.8 0.0 0.23 10.7 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin Bac_DnaA PF00308.18 ORF104842 - 0.092 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_30 PF13604.6 ORF49929 - 0.00031 20.5 0.5 0.0018 18.0 0.5 2.1 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF49929 - 0.0006 19.6 0.0 0.0034 17.1 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF49929 - 0.0022 18.3 1.0 0.35 11.1 0.3 2.6 1 1 1 2 2 2 1 AAA domain DEAD PF00270.29 ORF49929 - 0.007 16.2 0.1 0.013 15.3 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA PF00004.29 ORF49929 - 0.0073 16.7 0.0 0.023 15.1 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 ORF49929 - 0.022 15.1 1.6 1.5 9.1 0.3 2.5 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF49929 - 0.024 15.0 2.8 0.24 11.8 0.6 3.3 2 1 0 2 2 2 0 AAA ATPase domain Sigma54_activ_2 PF14532.6 ORF49929 - 0.04 14.0 0.1 0.097 12.8 0.1 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain Bac_DnaA PF00308.18 ORF49929 - 0.091 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial dnaA protein Zeta_toxin PF06414.12 ORF49929 - 0.11 11.8 0.0 0.23 10.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin Ephrin_rec_like PF07699.13 ORF8030 - 3.5e-08 33.1 10.3 6.8e-07 28.9 1.5 5.2 3 2 2 5 5 5 3 Putative ephrin-receptor like TIR_2 PF13676.6 ORF8030 - 0.0055 17.3 0.0 0.019 15.6 0.0 1.8 2 0 0 2 2 2 1 TIR domain OpuAC PF04069.12 ORF8030 - 0.27 10.8 0.0 0.45 10.0 0.0 1.3 1 0 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system zf_CCCH_4 PF18345.1 ORF95827 - 3.2e-11 42.9 19.5 2e-05 24.4 6.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF95827 - 2.2e-10 40.2 12.4 5.1e-05 23.1 3.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF95827 - 1.5e-08 34.2 12.2 9.6e-05 22.1 3.5 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF95827 - 6.7e-08 33.2 17.2 2e-05 25.2 0.8 3.4 3 1 1 4 4 4 2 Torus domain zf-CCCH_3 PF15663.5 ORF95827 - 0.013 15.7 6.9 0.6 10.3 6.9 2.7 1 1 0 1 1 1 0 Zinc-finger containing family gag-asp_proteas PF13975.6 ORF95827 - 0.053 14.1 0.0 0.46 11.1 0.0 2.4 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease zf-CCCH_2 PF14608.6 ORF95827 - 3.6 8.2 12.3 11 6.6 2.5 2.6 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF28802 - 3.2e-11 42.9 19.5 2e-05 24.4 6.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF28802 - 2.2e-10 40.2 12.4 5.1e-05 23.1 3.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF28802 - 1.5e-08 34.2 12.2 9.6e-05 22.1 3.5 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF28802 - 4.3e-08 33.8 16.7 2.1e-05 25.2 0.9 3.4 3 1 1 4 4 4 2 Torus domain zf-CCCH_3 PF15663.5 ORF28802 - 0.00026 21.2 1.4 0.17 12.1 0.1 2.7 2 0 0 2 2 2 2 Zinc-finger containing family gag-asp_proteas PF13975.6 ORF28802 - 0.053 14.1 0.0 0.46 11.1 0.0 2.4 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease zf-CCCH_2 PF14608.6 ORF28802 - 3.6 8.2 12.3 11 6.6 2.5 2.6 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Glyco_hydro_38N PF01074.22 ORF6575 - 1.9e-83 280.2 6.5 4.1e-83 279.1 6.5 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Glyco_hydro_38C PF07748.13 ORF6575 - 7.6e-22 78.4 1.1 2.1e-21 77.0 1.1 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Alpha-mann_mid PF09261.11 ORF6575 - 1.3e-16 60.5 1.3 3.8e-16 59.0 1.3 1.9 1 0 0 1 1 1 1 Alpha mannosidase middle domain NAGidase PF07555.13 ORF6575 - 0.0027 17.1 0.6 0.0027 17.1 0.6 1.8 2 0 0 2 2 2 1 beta-N-acetylglucosaminidase Glyco_hydro_38N PF01074.22 ORF55891 - 1.9e-83 280.2 6.5 4.1e-83 279.1 6.5 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Glyco_hydro_38C PF07748.13 ORF55891 - 7.6e-22 78.4 1.1 2.1e-21 77.0 1.1 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Alpha-mann_mid PF09261.11 ORF55891 - 1.3e-16 60.5 1.3 3.8e-16 59.0 1.3 1.9 1 0 0 1 1 1 1 Alpha mannosidase middle domain NAGidase PF07555.13 ORF55891 - 0.0027 17.1 0.6 0.0027 17.1 0.6 1.8 2 0 0 2 2 2 1 beta-N-acetylglucosaminidase TED_complement PF07678.14 ORF93025 - 2.2e-20 72.9 0.0 5.9e-20 71.5 0.0 1.8 1 0 0 1 1 1 1 A-macroglobulin TED domain A2M PF00207.22 ORF93025 - 6.2e-14 51.6 0.1 1.8e-13 50.1 0.1 1.9 1 0 0 1 1 1 1 Alpha-2-macroglobulin family A2M_recep PF07677.14 ORF93025 - 2e-06 28.4 0.2 1e-05 26.1 0.2 2.3 1 0 0 1 1 1 1 A-macroglobulin receptor binding domain MG2 PF01835.19 ORF93025 - 0.00047 20.6 0.2 0.0039 17.6 0.0 2.7 2 0 0 2 2 2 1 MG2 domain Arrestin_C PF02752.22 ORF93025 - 0.068 13.6 3.1 0.1 13.1 0.3 2.7 2 0 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain fn3_5 PF06280.12 ORF93025 - 0.074 13.7 4.5 0.22 12.2 0.8 3.3 2 1 1 3 3 3 0 Fn3-like domain Glyco_hydro_30C PF17189.4 ORF93025 - 0.34 11.2 2.5 2.2 8.5 2.5 2.6 1 0 0 1 1 1 0 Glycosyl hydrolase family 30 beta sandwich domain ASH PF15780.5 ORF93025 - 0.46 10.7 2.3 1.3 9.2 0.6 2.7 2 0 0 2 2 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin TED_complement PF07678.14 ORF110288 - 2.2e-20 72.9 0.0 5.9e-20 71.5 0.0 1.8 1 0 0 1 1 1 1 A-macroglobulin TED domain A2M PF00207.22 ORF110288 - 6.3e-14 51.6 0.1 1.8e-13 50.1 0.1 1.9 1 0 0 1 1 1 1 Alpha-2-macroglobulin family A2M_recep PF07677.14 ORF110288 - 2.3e-06 28.2 0.2 1.3e-05 25.8 0.2 2.3 1 0 0 1 1 1 1 A-macroglobulin receptor binding domain MG2 PF01835.19 ORF110288 - 0.00047 20.6 0.2 0.0039 17.6 0.0 2.7 2 0 0 2 2 2 1 MG2 domain Arrestin_C PF02752.22 ORF110288 - 0.058 13.8 2.8 0.1 13.1 0.3 2.7 2 0 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain fn3_5 PF06280.12 ORF110288 - 0.096 13.4 4.8 0.18 12.5 0.6 3.3 2 1 1 3 3 3 0 Fn3-like domain Glyco_hydro_30C PF17189.4 ORF110288 - 0.36 11.1 2.5 2.2 8.5 2.5 2.5 1 0 0 1 1 1 0 Glycosyl hydrolase family 30 beta sandwich domain ASH PF15780.5 ORF110288 - 0.47 10.7 2.3 1.3 9.2 0.6 2.7 2 0 0 2 2 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin ABC2_membrane_5 PF13346.6 ORF81180 - 7.1 6.1 13.4 0.8 9.2 5.4 2.3 2 0 0 2 2 2 0 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 ORF59717 - 7.1 6.1 13.4 0.8 9.2 5.4 2.3 2 0 0 2 2 2 0 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 ORF28993 - 7.1 6.1 13.4 0.8 9.2 5.4 2.3 2 0 0 2 2 2 0 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 ORF27302 - 7.1 6.1 13.4 0.8 9.2 5.4 2.3 2 0 0 2 2 2 0 ABC-2 family transporter protein Ephrin_rec_like PF07699.13 ORF54739 - 3.3e-08 33.2 10.3 6.7e-07 29.0 1.5 5.3 3 2 2 5 5 5 3 Putative ephrin-receptor like TIR_2 PF13676.6 ORF54739 - 0.0054 17.3 0.0 0.019 15.6 0.0 1.8 2 0 0 2 2 2 1 TIR domain OpuAC PF04069.12 ORF54739 - 0.27 10.8 0.0 0.45 10.1 0.0 1.3 1 0 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system CTD PF12815.7 ORF8020 - 4.4e-05 23.9 11.0 0.002 18.7 5.7 3.1 1 1 1 2 2 2 2 Spt5 C-terminal nonapeptide repeat binding Spt4 CTD PF12815.7 ORF38876 - 8.2e-05 23.1 10.8 0.045 14.3 10.8 3.1 1 1 0 1 1 1 1 Spt5 C-terminal nonapeptide repeat binding Spt4 DUF4092 PF13322.6 ORF85440 - 8.3e-50 169.1 0.4 1.8e-49 168.0 0.1 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4092) Peptidase_M60 PF13402.6 ORF85440 - 8.3e-45 153.4 2.6 9.4e-45 153.2 0.3 2.1 2 0 0 2 2 2 1 Peptidase M60, enhancin and enhancin-like M60-like_N PF17291.2 ORF85440 - 2.1e-15 56.6 0.1 7.2e-15 54.8 0.1 1.9 1 0 0 1 1 1 1 N-terminal domain of M60-like peptidases PQQ PF01011.21 ORF85440 - 0.0018 18.1 0.1 0.0068 16.3 0.1 2.0 1 0 0 1 1 1 1 PQQ enzyme repeat CBP_BcsQ PF06564.12 ORF110416 - 0.21 11.1 1.9 5.2 6.5 0.3 2.7 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ UCH PF00443.29 ORF73975 - 1.6e-29 103.2 1.3 4.7e-29 101.7 1.3 1.9 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF73975 - 1.6e-22 80.5 0.1 4e-22 79.2 0.1 1.6 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase AvrPtoB_bdg PF16847.5 ORF73975 - 0.21 12.1 0.0 0.49 10.9 0.0 1.5 1 0 0 1 1 1 0 Avirulence AvrPtoB, BAK1-binding domain UCH PF00443.29 ORF54363 - 1.6e-29 103.2 1.3 4.7e-29 101.7 1.3 1.9 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF54363 - 1.6e-22 80.5 0.1 4e-22 79.2 0.1 1.6 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase AvrPtoB_bdg PF16847.5 ORF54363 - 0.21 12.1 0.0 0.49 10.9 0.0 1.5 1 0 0 1 1 1 0 Avirulence AvrPtoB, BAK1-binding domain UCH PF00443.29 ORF46242 - 1.6e-29 103.2 1.3 4.7e-29 101.7 1.3 1.9 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF46242 - 1.6e-22 80.5 0.1 4e-22 79.2 0.1 1.6 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase AvrPtoB_bdg PF16847.5 ORF46242 - 0.21 12.1 0.0 0.49 10.9 0.0 1.5 1 0 0 1 1 1 0 Avirulence AvrPtoB, BAK1-binding domain PIP5K PF01504.18 ORF54060 - 3.3e-52 177.4 0.0 1.5e-51 175.3 0.0 1.9 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase C2 PF00168.30 ORF54060 - 2.4e-09 37.4 0.0 0.0018 18.5 0.0 3.0 2 1 0 2 2 2 2 C2 domain IPK PF03770.16 ORF54060 - 0.00071 19.5 0.0 0.34 10.7 0.0 2.3 2 0 0 2 2 2 2 Inositol polyphosphate kinase DUF3395 PF11875.8 ORF54060 - 0.00085 19.2 0.0 0.4 10.6 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3395) DUF3337 PF11816.8 ORF54060 - 0.037 13.9 0.0 0.065 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3337) AAA_9 PF12781.7 ORF60452 - 1.9e-81 272.4 0.5 1.9e-81 272.4 0.5 2.6 3 0 0 3 3 3 1 ATP-binding dynein motor region AAA_8 PF12780.7 ORF60452 - 3.3e-72 242.9 3.9 3.6e-71 239.5 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF60452 - 8.8e-44 149.9 19.7 1.6e-43 149.1 19.7 1.4 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor ATG16 PF08614.11 ORF60452 - 0.0038 17.5 19.0 0.025 14.8 3.1 2.8 2 0 0 2 2 2 2 Autophagy protein 16 (ATG16) DHR10 PF18595.1 ORF60452 - 0.0093 16.0 35.9 0.24 11.5 7.6 4.9 3 2 1 4 4 4 3 Designed helical repeat protein 10 domain Fez1 PF06818.15 ORF60452 - 0.12 12.8 21.1 0.031 14.7 2.3 3.2 3 0 0 3 3 3 0 Fez1 SKA2 PF16740.5 ORF60452 - 0.31 10.9 11.4 0.37 10.6 0.8 3.3 2 1 0 2 2 2 0 Spindle and kinetochore-associated protein 2 DUF4407 PF14362.6 ORF60452 - 0.96 8.7 12.2 0.5 9.7 5.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) DUF1515 PF07439.11 ORF60452 - 7.2 6.7 7.4 3.9 7.5 2.5 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1515) tRNA-synt_1 PF00133.22 ORF100195 - 1.4e-30 106.2 0.0 1e-29 103.3 0.0 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF100195 - 5.5e-13 49.1 0.0 1.3e-12 47.9 0.0 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 ORF100195 - 6e-09 35.7 0.0 1.1e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 ORF100195 - 1.2e-08 34.2 0.2 1.1e-07 30.9 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (M) SBF2 PF12335.8 ORF100195 - 0.13 11.8 0.0 0.3 10.7 0.0 1.5 1 0 0 1 1 1 0 Myotubularin protein Kinesin PF00225.23 ORF94400 - 2.4e-78 263.4 2.5 2.4e-78 263.4 2.5 4.7 2 1 0 3 3 3 1 Kinesin motor domain T2SSG PF08334.11 ORF94400 - 2.5 8.2 8.3 0.36 10.9 1.1 3.2 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein G FUSC PF04632.12 ORF94400 - 6.1 5.2 4.8 9.7 4.6 0.1 2.9 2 1 1 3 3 3 0 Fusaric acid resistance protein family ubiquitin PF00240.23 ORF73074 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF73074 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF73074 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF73074 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF73074 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF73074 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF73074 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF73074 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF73074 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF73074 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain ubiquitin PF00240.23 ORF69904 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF69904 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF69904 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF69904 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF69904 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF69904 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF69904 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF69904 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF69904 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF69904 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain ubiquitin PF00240.23 ORF50177 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF50177 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF50177 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF50177 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF50177 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF50177 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF50177 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF50177 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF50177 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF50177 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain ubiquitin PF00240.23 ORF1968 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF1968 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF1968 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF1968 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF1968 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF1968 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF1968 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF1968 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF1968 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF1968 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain ubiquitin PF00240.23 ORF101617 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF101617 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF101617 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF101617 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF101617 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF101617 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF101617 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF101617 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF101617 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF101617 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain AAA_12 PF13087.6 ORF85285 - 4.3e-57 193.0 0.3 1.2e-56 191.5 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_11 PF13086.6 ORF85285 - 1.1e-27 97.5 1.4 5.3e-20 72.3 0.3 4.3 3 1 1 4 4 4 2 AAA domain AAA_19 PF13245.6 ORF85285 - 1.1e-07 32.3 1.7 3e-06 27.6 0.0 2.9 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF85285 - 1.3e-07 31.6 0.0 1.3e-07 31.6 0.0 3.1 3 0 0 3 3 3 1 AAA domain WW PF00397.26 ORF85285 - 3.8e-07 30.1 2.4 6.1e-07 29.4 0.9 2.1 2 0 0 2 2 2 1 WW domain UvrD_C_2 PF13538.6 ORF85285 - 0.00014 21.6 0.3 0.0003 20.6 0.3 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 ORF85285 - 0.00044 20.0 0.8 0.26 11.0 0.0 3.5 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase AAA PF00004.29 ORF85285 - 0.0062 17.0 0.9 0.02 15.3 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF85285 - 0.0071 16.6 3.8 0.24 11.7 0.0 3.5 4 0 0 4 4 4 1 AAA domain Nrap_D6 PF17407.2 ORF85285 - 0.042 14.0 0.2 0.084 13.1 0.2 1.5 1 0 0 1 1 1 0 Nrap protein domain 6 AAA_25 PF13481.6 ORF85285 - 0.081 12.5 0.0 0.27 10.8 0.0 1.9 1 0 0 1 1 1 0 AAA domain TFIID-18kDa PF02269.16 ORF85285 - 0.14 12.2 0.3 0.5 10.4 0.3 1.9 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit CHASE4 PF05228.13 ORF85285 - 0.15 12.3 1.4 4 7.6 1.6 2.5 2 0 0 2 2 2 0 CHASE4 domain DUF2075 PF09848.9 ORF85285 - 0.28 10.4 0.0 0.28 10.4 0.0 3.5 4 0 0 4 4 4 0 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 ORF85285 - 0.57 10.5 0.0 0.57 10.5 0.0 2.8 3 1 0 3 3 3 0 AAA ATPase domain ATPase PF06745.13 ORF85285 - 0.59 9.4 0.0 0.59 9.4 0.0 2.3 3 0 0 3 3 3 0 KaiC DUF87 PF01935.17 ORF85285 - 0.84 9.7 8.3 4 7.5 1.3 3.0 3 0 0 3 3 3 0 Helicase HerA, central domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks2.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks2.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks2.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks2.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:56:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ThiS PF02597.20 ORF47847 - 1.6e-22 79.9 0.0 1.7e-22 79.8 0.0 1.0 1 0 0 1 1 1 1 ThiS family TGS PF02824.21 ORF47847 - 0.05 13.7 0.0 0.079 13.0 0.0 1.3 1 0 0 1 1 1 0 TGS domain Ub-Mut7C PF14451.6 ORF47847 - 0.12 12.2 0.1 0.64 9.9 0.0 1.9 2 1 0 2 2 2 0 Mut7-C ubiquitin META PF03724.16 ORF47450 - 4.6e-16 58.7 1.9 5.1e-16 58.6 1.9 1.0 1 0 0 1 1 1 1 META domain AJAP1_PANP_C PF15298.6 ORF47036 - 0.029 14.6 0.6 0.033 14.4 0.6 1.1 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF4969 PF16339.5 ORF46963 - 0.056 13.8 0.7 0.07 13.5 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4969) RIH_assoc PF08454.11 ORF46945 - 2.3e-09 37.0 0.4 2.9e-09 36.7 0.4 1.2 1 0 0 1 1 1 1 RyR and IP3R Homology associated SR-25 PF10500.9 ORF46916 - 9.2e-05 22.2 33.3 9.6e-05 22.1 33.3 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein PCP_red PF08369.10 ORF46916 - 0.0072 16.5 0.1 0.012 15.8 0.1 1.3 1 0 0 1 1 1 1 Proto-chlorophyllide reductase 57 kD subunit CCDC106 PF15794.5 ORF46916 - 0.04 13.6 21.1 0.042 13.6 21.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 DUF3807 PF12720.7 ORF46916 - 0.17 12.2 18.4 0.18 12.1 18.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Med19 PF10278.9 ORF46916 - 0.4 10.6 26.3 0.44 10.5 26.3 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF4603 PF15376.6 ORF46916 - 0.43 7.9 16.3 0.49 7.7 16.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) RNA_pol_Rpc4 PF05132.14 ORF46916 - 1.6 9.1 16.7 1.8 9.0 16.7 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 SRP-alpha_N PF04086.13 ORF46916 - 1.7 8.5 21.4 1.7 8.5 21.4 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal GAGA_bind PF06217.12 ORF46916 - 1.8 8.7 15.9 1.7 8.8 15.9 1.0 1 0 0 1 1 1 0 GAGA binding protein-like family RNA_polI_A34 PF08208.11 ORF46916 - 2.1 8.4 33.7 2.3 8.3 33.7 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Vfa1 PF08432.10 ORF46916 - 3 8.1 23.3 3.1 8.1 23.3 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 NARP1 PF12569.8 ORF46916 - 4 6.2 18.7 4 6.2 18.7 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Presenilin PF01080.17 ORF46916 - 5 5.8 14.4 5.3 5.7 14.4 1.0 1 0 0 1 1 1 0 Presenilin Tim54 PF11711.8 ORF46916 - 5 5.8 15.3 5.3 5.7 15.3 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF4604 PF15377.6 ORF46916 - 5.3 7.4 29.3 6 7.3 29.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) SspB PF04386.13 ORF46916 - 5.3 6.9 11.0 6.3 6.7 11.0 1.1 1 0 0 1 1 1 0 Stringent starvation protein B Coilin_N PF15862.5 ORF46916 - 6.3 6.6 27.7 7.2 6.4 27.7 1.1 1 0 0 1 1 1 0 Coilin N-terminus SpoIIP PF07454.11 ORF46916 - 6.9 6.0 15.7 7.8 5.9 15.7 1.0 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) Connexin PF00029.19 ORF46916 - 7.1 6.3 13.7 7.6 6.2 13.7 1.0 1 0 0 1 1 1 0 Connexin RR_TM4-6 PF06459.12 ORF46916 - 7.9 6.2 17.6 8.1 6.2 17.6 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PPL5 PF18168.1 ORF46916 - 8.1 5.6 15.1 8.5 5.6 15.1 1.0 1 0 0 1 1 1 0 Prim-pol family 5 DUF4337 PF14235.6 ORF46916 - 8.2 6.5 14.6 8 6.5 14.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Jak1_Phl PF17887.1 ORF46916 - 9.1 6.2 14.9 12 5.9 14.9 1.3 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain DUF1719 PF08224.11 ORF46075 - 0.02 14.0 0.1 0.022 13.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) Adeno_PIX PF03955.14 ORF46043 - 8.9 6.5 15.1 17 5.6 14.7 1.6 1 1 0 1 1 1 0 Adenovirus hexon-associated protein (IX) DUF948 PF06103.11 ORF45986 - 0.0012 19.0 8.1 0.0014 18.8 8.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) SSP160 PF06933.11 ORF45986 - 3.7 5.6 17.6 5.1 5.2 17.6 1.3 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 SNase PF00565.17 ORF45669 - 0.079 13.4 0.0 0.094 13.2 0.0 1.1 1 0 0 1 1 1 0 Staphylococcal nuclease homologue ABC_membrane PF00664.23 ORF4444 - 2.2e-11 43.9 1.5 2.8e-11 43.6 1.5 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF2585 PF10755.9 ORF4444 - 0.026 14.2 0.5 0.027 14.2 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2585) SHIPPO-rpt PF07004.12 ORF43285 - 0.00011 22.9 6.8 0.037 15.0 1.8 3.1 3 0 0 3 3 3 2 Sperm-tail PG-rich repeat PA_decarbox PF05870.11 ORF43124 - 0.12 12.0 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Phenolic acid decarboxylase (PAD) DUF4969 PF16339.5 ORF42618 - 0.056 13.8 0.7 0.07 13.5 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4969) SMN PF06003.12 ORF42534 - 0.25 10.6 2.0 0.29 10.4 2.0 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) DUF1158 PF06643.11 ORF42527 - 0.076 13.5 0.2 0.09 13.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1158) RhlB PF12300.8 ORF42370 - 0.058 13.5 3.6 0.061 13.5 3.6 1.0 1 0 0 1 1 1 0 ATP-dependent RNA helicase RhlB Rep_fac-A_C PF08646.10 ORF42192 - 0.0023 17.7 1.4 0.0028 17.4 1.4 1.1 1 0 0 1 1 1 1 Replication factor-A C terminal domain Piezo_RRas_bdg PF12166.8 ORF42177 - 7.4e-15 55.2 0.5 7.7e-15 55.1 0.5 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain ORC4_C PF14629.6 ORF42040 - 0.1 11.9 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus Waikav_capsid_1 PF12264.8 ORF41980 - 0.18 11.3 1.0 0.19 11.2 1.0 1.0 1 0 0 1 1 1 0 Waikavirus capsid protein 1 PIN_11 PF18479.1 ORF41819 - 0.017 15.3 0.0 0.017 15.3 0.0 1.1 1 0 0 1 1 1 0 PIN like domain ATP_bind_1 PF03029.17 ORF41744 - 1.6e-11 44.5 0.6 1.7e-11 44.3 0.6 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein EF-hand_8 PF13833.6 ORF41693 - 4.2e-14 52.1 4.0 8.4e-11 41.6 0.4 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF41693 - 1.1e-13 49.7 2.8 6.5e-06 25.3 0.2 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF41693 - 1.1e-12 48.2 1.1 1.3e-12 48.0 1.1 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF41693 - 7e-11 41.2 0.2 7.1e-06 25.6 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EFhand_Ca_insen PF08726.10 ORF41693 - 0.00016 21.7 1.5 0.00033 20.7 1.5 1.6 1 1 0 1 1 1 1 Ca2+ insensitive EF hand EF-hand_5 PF13202.6 ORF41693 - 0.00031 20.1 0.3 0.013 14.9 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_9 PF14658.6 ORF41693 - 0.00086 19.6 0.1 0.001 19.3 0.1 1.1 1 0 0 1 1 1 1 EF-hand domain Dockerin_1 PF00404.18 ORF41693 - 0.016 15.4 0.0 0.02 15.1 0.0 1.3 1 0 0 1 1 1 0 Dockerin type I domain SPARC_Ca_bdg PF10591.9 ORF41693 - 0.049 14.0 0.1 0.063 13.6 0.1 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Pkinase PF00069.25 ORF41173 - 2.3e-11 43.6 0.0 2.3e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain DUF2517 PF10725.9 ORF41173 - 0.0035 17.1 0.0 0.0052 16.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2517) Pkinase_Tyr PF07714.17 ORF41173 - 0.015 14.6 0.0 0.015 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase Humanin PF15040.6 ORF41146 - 0.19 11.2 2.8 7.6 6.1 1.2 2.6 2 0 0 2 2 2 0 Humanin family Gemini_AL2 PF01440.16 ORF40950 - 0.04 14.4 0.2 0.047 14.1 0.2 1.2 1 0 0 1 1 1 0 Geminivirus AL2 protein DUF5345 PF17280.2 ORF40531 - 0.18 11.8 0.7 0.23 11.4 0.4 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5345) HSA PF07529.13 ORF40155 - 1.2e-08 35.1 1.1 1.5e-08 34.8 1.1 1.2 1 0 0 1 1 1 1 HSA WD40 PF00400.32 ORF40054 - 0.0026 18.6 0.0 0.0053 17.6 0.0 1.5 1 0 0 1 1 1 1 WD domain, G-beta repeat VID27 PF08553.10 ORF40054 - 0.016 14.3 0.0 0.018 14.1 0.0 1.0 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain eIF2A PF08662.11 ORF40054 - 0.04 13.8 0.1 0.045 13.6 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A ANAPC4_WD40 PF12894.7 ORF40054 - 0.062 13.6 0.0 0.074 13.4 0.0 1.3 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain UCH PF00443.29 ORF37188 - 4.7e-16 59.1 0.0 4.9e-16 59.0 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF37188 - 4e-06 26.7 0.0 4.7e-06 26.4 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase FNIP PF05725.12 ORF36658 - 8e-22 77.1 8.9 4.1e-13 49.3 0.7 2.1 1 1 1 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 ORF36658 - 0.022 14.7 0.1 0.029 14.3 0.1 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) bcl-2I13 PF12201.8 ORF35952 - 0.069 13.0 0.4 0.069 13.0 0.4 1.1 1 0 0 1 1 1 0 Bcl2-interacting killer, BH3-domain containing HTH_18 PF12833.7 ORF35855 - 3.7e-20 72.0 0.4 4.2e-20 71.8 0.4 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF35855 - 2.3e-13 49.9 0.8 2.8e-08 33.6 0.0 2.1 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family UPF0086 PF01868.16 ORF35681 - 0.018 15.0 0.4 0.022 14.7 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function UPF0086 Type2_restr_D3 PF16902.5 ORF35574 - 0.017 15.0 0.4 0.017 15.0 0.4 1.5 2 0 0 2 2 2 0 Type-2 restriction enzyme D3 domain DUF4775 PF16001.5 ORF35280 - 0.6 9.5 4.9 2.7 7.3 3.3 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4775) Calc_CGRP_IAPP PF00214.19 ORF35257 - 0.042 14.2 0.4 0.046 14.1 0.4 1.2 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family SMK-1 PF04802.15 ORF34592 - 0.013 15.3 0.4 0.015 15.1 0.4 1.0 1 0 0 1 1 1 0 Component of IIS longevity pathway SMK-1 GCD14_N PF14801.6 ORF34516 - 0.056 13.3 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit N-term FtsX PF02687.21 ORF34195 - 1.5 9.3 7.8 17 6.0 7.8 2.0 1 1 0 1 1 1 0 FtsX-like permease family K_channel_TID PF07941.11 ORF34094 - 0.13 12.7 0.7 0.13 12.7 0.7 1.5 2 0 0 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain Bac_thur_toxin PF01338.18 ORF33952 - 0.11 11.9 3.7 0.11 11.9 3.7 1.1 1 0 0 1 1 1 0 Bacillus thuringiensis toxin Trehalose_PPase PF02358.16 ORF3312 - 0.25 10.4 0.0 0.25 10.4 0.0 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase Fzo_mitofusin PF04799.13 ORF32855 - 0.0033 17.0 3.1 0.005 16.4 3.1 1.3 1 0 0 1 1 1 1 fzo-like conserved region ATPase PF06745.13 ORF32855 - 0.14 11.5 0.7 0.15 11.4 0.7 1.1 1 0 0 1 1 1 0 KaiC MatE PF01554.18 ORF32512 - 1.8e-06 27.7 1.7 1.8e-06 27.7 1.7 1.0 1 0 0 1 1 1 1 MatE ColG_sub PF18496.1 ORF32137 - 0.00086 19.4 0.7 0.001 19.2 0.7 1.1 1 0 0 1 1 1 1 Collagenase G catalytic helper subdomain Ribosomal_L14e PF01929.17 ORF30509 - 4.2e-26 91.3 6.4 4.2e-26 91.3 6.4 1.9 1 1 1 2 2 2 2 Ribosomal protein L14 Thioredoxin PF00085.20 ORF30279 - 0.0053 16.7 0.0 0.0063 16.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin RNA_pol_Rpb1_R PF05001.13 ORF30062 - 0.042 14.2 3.7 2.4 8.7 0.0 2.6 2 0 0 2 2 2 0 RNA polymerase Rpb1 C-terminal repeat UPF0014 PF03649.13 ORF27775 - 0.0033 16.8 0.5 0.0036 16.7 0.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) Claudin_3 PF06653.11 ORF27775 - 0.034 14.1 3.5 0.039 13.9 3.5 1.1 1 0 0 1 1 1 0 Tight junction protein, Claudin-like LAX PF15681.5 ORF27775 - 0.19 10.5 0.4 0.22 10.3 0.4 1.1 1 0 0 1 1 1 0 Lymphocyte activation family X DUF2207 PF09972.9 ORF27775 - 0.29 9.8 2.2 0.3 9.8 2.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) IML1 PF12257.8 ORF27396 - 0.048 12.8 1.1 0.049 12.7 1.1 1.0 1 0 0 1 1 1 0 Vacuolar membrane-associated protein Iml1 MraZ PF02381.18 ORF27396 - 0.1 12.6 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Peptidase_C1 PF00112.23 ORF26917 - 8e-23 81.7 0.1 8.6e-23 81.6 0.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF26917 - 3.3e-06 26.2 0.0 3.6e-06 26.0 0.0 1.0 1 0 0 1 1 1 1 Peptidase C1-like family DUF1980 PF09323.10 ORF26783 - 0.099 12.6 0.2 0.12 12.3 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Sugar_tr PF00083.24 ORF26622 - 1.4e-05 24.2 4.9 1.5e-05 24.1 4.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2207 PF09972.9 ORF26622 - 3.1 6.5 5.1 3.6 6.2 5.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) EF-hand_1 PF00036.32 ORF2654 - 3.9e-11 41.7 0.3 1.2e-06 27.6 0.1 2.2 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF2654 - 1.5e-07 30.8 0.0 2e-06 27.3 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF2654 - 1.4e-06 28.7 0.0 0.0018 18.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF2654 - 8.1e-06 25.1 0.1 1.3e-05 24.4 0.1 1.4 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF2654 - 0.00075 19.3 0.3 0.015 15.2 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_4 PF12763.7 ORF2654 - 0.0025 17.7 0.1 0.57 10.2 0.0 2.0 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand tRNA_synt_1c_R1 PF04558.15 ORF2654 - 0.013 15.5 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 EF-hand_9 PF14658.6 ORF2654 - 0.04 14.2 0.0 7.7 6.9 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain Bac_thur_toxin PF01338.18 ORF26264 - 0.11 11.9 3.7 0.11 11.9 3.7 1.1 1 0 0 1 1 1 0 Bacillus thuringiensis toxin Glutaredoxin PF00462.24 ORF26151 - 2.6e-13 49.9 0.0 3e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_3 PF13192.6 ORF26151 - 0.0013 18.7 0.0 0.0019 18.2 0.0 1.3 1 1 0 1 1 1 1 Thioredoxin domain DUF836 PF05768.14 ORF26151 - 0.0096 16.3 0.0 0.0099 16.3 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) BtrH_N PF14399.6 ORF26151 - 0.17 12.1 0.0 0.18 12.1 0.0 1.0 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal Spore_YhaL PF14147.6 ORF25525 - 0.23 11.2 3.3 0.46 10.2 3.3 1.5 1 0 0 1 1 1 0 Sporulation protein YhaL FUSC PF04632.12 ORF24918 - 3.9 5.9 9.7 4.6 5.7 9.7 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family BatA PF07584.11 ORF24704 - 0.018 15.4 0.3 0.026 14.9 0.2 1.3 1 1 0 1 1 1 0 Aerotolerance regulator N-terminal ParcG PF10274.9 ORF24704 - 0.069 13.3 0.2 0.077 13.1 0.2 1.0 1 0 0 1 1 1 0 Parkin co-regulated protein DUF2635 PF10948.8 ORF24704 - 0.15 11.8 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2635) IGF2_C PF08365.11 ORF24682 - 0.083 12.9 3.3 0.09 12.8 2.5 1.5 1 1 0 1 1 1 0 Insulin-like growth factor II E-peptide Pap_E4 PF02711.14 ORF24682 - 0.27 12.2 7.9 0.3 12.1 7.9 1.3 1 1 0 1 1 1 0 E4 protein EF-hand_1 PF00036.32 ORF22633 - 0.0066 15.9 2.3 0.051 13.1 0.5 2.9 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF22633 - 0.16 12.0 1.2 0.63 10.1 0.4 2.4 2 1 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 ORF22633 - 0.22 11.1 0.3 0.22 11.1 0.3 2.3 2 1 1 3 3 3 0 EF hand DUF2992 PF11208.8 ORF22248 - 0.68 10.2 8.6 0.77 10.0 8.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) RCDG1 PF15725.5 ORF22107 - 6.9 7.2 9.9 3 8.3 6.5 1.8 2 0 0 2 2 2 0 Renal cancer differentiation gene 1 protein HupF_HypC PF01455.18 ORF22049 - 0.065 13.4 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 HupF/HypC family DUF5363 PF17320.2 ORF21744 - 0.28 11.1 4.2 0.32 10.9 0.3 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5363) Peptidase_C31 PF05410.13 ORF21494 - 0.061 13.4 0.0 0.09 12.9 0.0 1.3 1 0 0 1 1 1 0 Porcine arterivirus-type cysteine proteinase alpha DUF1295 PF06966.12 ORF21352 - 7.2e-27 94.4 0.3 7.3e-27 94.4 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF21352 - 5.1e-07 29.8 0.2 5.3e-07 29.7 0.2 1.0 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF21352 - 6.7e-05 23.2 0.2 7.7e-05 23.0 0.2 1.2 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF21352 - 9.2e-05 22.8 0.7 0.00012 22.4 0.7 1.3 1 0 0 1 1 1 1 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF21352 - 0.0089 14.8 0.6 0.014 14.2 0.6 1.5 1 1 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family LNP1 PF15419.6 ORF20515 - 0.023 15.0 2.3 0.029 14.6 2.3 1.2 1 0 0 1 1 1 0 Leukemia NUP98 fusion partner 1 CAAD PF14159.6 ORF20436 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Peptidase_S10 PF00450.22 ORF19385 - 7.3e-07 28.9 0.0 7.9e-07 28.8 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Baculo_LEF-2 PF03041.14 ORF19385 - 0.019 14.6 0.0 0.019 14.6 0.0 1.2 1 0 0 1 1 1 0 lef-2 UXS1_N PF11803.8 ORF1885 - 0.049 14.0 0.1 0.092 13.1 0.0 1.5 1 1 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal Ribosomal_L4 PF00573.22 ORF18808 - 1.8 8.2 5.7 2.2 7.9 5.7 1.1 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family C_tripleX PF02363.19 ORF18762 - 0.022 15.0 0.9 0.022 15.0 0.9 1.5 2 0 0 2 2 2 0 Cysteine rich repeat ZapB PF06005.12 ORF18426 - 1.1e-24 86.6 21.6 2.5e-24 85.5 21.6 1.5 1 1 0 1 1 1 1 Cell division protein ZapB DHR10 PF18595.1 ORF18426 - 1.5e-05 25.0 14.6 1.8e-05 24.7 14.6 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain DUF3450 PF11932.8 ORF18426 - 0.00045 19.6 11.1 0.0005 19.5 11.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) PspA_IM30 PF04012.12 ORF18426 - 0.00063 19.4 8.8 0.00071 19.2 8.8 1.0 1 0 0 1 1 1 1 PspA/IM30 family Seryl_tRNA_N PF02403.22 ORF18426 - 0.0007 19.8 8.6 0.00089 19.5 8.6 1.2 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain KASH_CCD PF14662.6 ORF18426 - 0.00096 19.0 13.5 0.001 18.9 13.5 1.1 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Leu_zip PF15294.6 ORF18426 - 0.0015 18.1 7.2 0.0018 17.9 7.2 1.1 1 0 0 1 1 1 1 Leucine zipper YabA PF06156.13 ORF18426 - 0.0017 18.9 9.2 0.0025 18.4 9.2 1.2 1 0 0 1 1 1 1 Initiation control protein YabA UPF0242 PF06785.11 ORF18426 - 0.0026 17.9 12.2 0.0029 17.7 12.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus HemX PF04375.14 ORF18426 - 0.0029 17.0 9.5 0.0032 16.8 9.5 1.0 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase Herpes_UL6 PF01763.16 ORF18426 - 0.0029 16.2 6.0 0.0031 16.1 6.0 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like CENP-F_leu_zip PF10473.9 ORF18426 - 0.0031 17.6 10.1 0.0034 17.4 10.1 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ADIP PF11559.8 ORF18426 - 0.0032 17.6 11.0 0.0036 17.4 11.0 1.0 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Filament PF00038.21 ORF18426 - 0.0037 16.9 10.1 0.0041 16.7 10.1 1.0 1 0 0 1 1 1 1 Intermediate filament protein betaPIX_CC PF16523.5 ORF18426 - 0.0052 16.6 3.9 0.0063 16.3 3.9 1.2 1 0 0 1 1 1 1 betaPIX coiled coil CtIP_N PF10482.9 ORF18426 - 0.0081 16.2 12.8 0.016 15.2 3.3 2.1 2 0 0 2 2 2 1 Tumour-suppressor protein CtIP N-terminal domain DUF4763 PF15960.5 ORF18426 - 0.01 15.1 9.4 0.011 15.0 9.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) HAUS-augmin3 PF14932.6 ORF18426 - 0.012 15.2 10.2 0.013 15.1 10.2 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Uso1_p115_C PF04871.13 ORF18426 - 0.012 15.9 10.8 0.014 15.8 10.8 1.0 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region BRE1 PF08647.11 ORF18426 - 0.013 15.6 9.8 0.015 15.4 9.8 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase TMF_TATA_bd PF12325.8 ORF18426 - 0.014 15.6 12.5 0.015 15.5 12.5 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Cep57_CLD_2 PF14197.6 ORF18426 - 0.014 15.4 10.4 0.021 14.9 9.9 1.6 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 GIT_CC PF16559.5 ORF18426 - 0.015 15.2 9.7 0.015 15.2 9.7 2.0 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor She9_MDM33 PF05546.11 ORF18426 - 0.015 15.1 5.0 0.018 14.8 5.0 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family dCache_2 PF08269.11 ORF18426 - 0.018 14.2 5.5 0.021 14.0 5.5 1.0 1 0 0 1 1 1 0 Cache domain APG6_N PF17675.1 ORF18426 - 0.026 15.1 14.0 0.032 14.8 14.0 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF4795 PF16043.5 ORF18426 - 0.029 14.0 5.4 0.035 13.7 5.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF4757 PF15949.5 ORF18426 - 0.041 14.3 8.0 0.055 13.9 8.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4757) Jnk-SapK_ap_N PF09744.9 ORF18426 - 0.043 14.0 11.9 0.05 13.8 11.9 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF4201 PF13870.6 ORF18426 - 0.049 13.4 10.6 0.054 13.2 10.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) DUF1664 PF07889.12 ORF18426 - 0.053 13.6 4.3 0.063 13.3 4.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) HMMR_N PF15905.5 ORF18426 - 0.058 12.9 10.5 0.062 12.8 10.5 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Spc7 PF08317.11 ORF18426 - 0.063 12.1 10.0 0.065 12.1 10.0 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4407 PF14362.6 ORF18426 - 0.067 12.5 4.2 0.075 12.4 4.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4140 PF13600.6 ORF18426 - 0.067 13.6 6.6 0.12 12.8 6.4 1.5 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) COG6 PF06419.11 ORF18426 - 0.094 10.9 6.5 0.1 10.8 6.5 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 Atg14 PF10186.9 ORF18426 - 0.096 11.8 6.6 0.098 11.7 6.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlaC_arch PF05377.11 ORF18426 - 0.099 13.0 8.9 0.31 11.5 4.0 2.1 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) CENP-H PF05837.12 ORF18426 - 0.14 12.6 9.8 0.16 12.4 9.8 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Tox-ODYAM1 PF15642.6 ORF18426 - 0.15 11.0 6.6 0.15 11.0 6.6 1.0 1 0 0 1 1 1 0 Toxin in Odyssella and Amoebophilus Sec34 PF04136.15 ORF18426 - 0.17 11.8 7.4 0.21 11.5 7.4 1.1 1 0 0 1 1 1 0 Sec34-like family DctP PF03480.13 ORF18426 - 0.18 11.1 5.3 0.21 10.9 5.3 1.1 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein, family 7 Occludin_ELL PF07303.13 ORF18426 - 0.18 12.5 5.7 0.47 11.2 5.6 1.6 1 1 0 1 1 1 0 Occludin homology domain HAUS6_N PF14661.6 ORF18426 - 0.19 11.3 6.1 0.22 11.1 6.1 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus CLZ PF16526.5 ORF18426 - 0.19 12.1 9.6 0.21 12.0 5.3 2.0 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Prefoldin_2 PF01920.20 ORF18426 - 0.2 11.6 12.7 1.5 8.8 5.2 2.1 1 1 1 2 2 2 0 Prefoldin subunit DivIC PF04977.15 ORF18426 - 0.23 11.3 13.6 0.1 12.4 8.1 2.2 1 1 1 2 2 2 0 Septum formation initiator CP12 PF02672.15 ORF18426 - 0.24 12.2 5.9 0.63 10.8 6.0 1.7 1 1 0 1 1 1 0 CP12 domain BLOC1_2 PF10046.9 ORF18426 - 0.24 11.7 8.9 0.63 10.4 8.8 1.7 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 JIP_LZII PF16471.5 ORF18426 - 0.25 11.6 10.7 2.3 8.5 8.7 2.3 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II DUF2203 PF09969.9 ORF18426 - 0.28 11.9 6.0 0.31 11.7 6.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF2205 PF10224.9 ORF18426 - 0.29 11.2 10.3 0.64 10.1 1.1 2.1 1 1 1 2 2 2 0 Short coiled-coil protein Prominin PF05478.11 ORF18426 - 0.29 9.0 4.1 0.3 9.0 4.1 1.1 1 0 0 1 1 1 0 Prominin Spc24 PF08286.11 ORF18426 - 0.3 11.3 12.5 2.3 8.5 12.5 1.9 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 bZIP_1 PF00170.21 ORF18426 - 0.42 10.8 11.9 1.4 9.1 9.0 2.4 1 1 1 2 2 2 0 bZIP transcription factor Tho2 PF11262.8 ORF18426 - 0.47 9.6 6.6 0.53 9.4 6.6 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 TMPIT PF07851.13 ORF18426 - 0.5 9.6 6.1 0.52 9.5 6.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein CCDC-167 PF15188.6 ORF18426 - 0.51 10.7 9.6 0.99 9.8 9.6 1.6 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 LPP PF04728.13 ORF18426 - 0.71 10.3 5.8 3 8.3 5.0 2.3 1 1 1 2 2 2 0 Lipoprotein leucine-zipper V_ATPase_I PF01496.19 ORF18426 - 0.78 7.6 6.0 0.74 7.7 6.0 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TSC22 PF01166.18 ORF18426 - 1 9.8 11.9 5.3 7.4 3.1 2.6 1 1 2 3 3 2 0 TSC-22/dip/bun family bZIP_2 PF07716.15 ORF18426 - 1 9.5 17.4 0.25 11.4 3.5 2.8 1 1 2 3 3 3 0 Basic region leucine zipper CC2-LZ PF16516.5 ORF18426 - 1.2 9.6 13.3 0.24 11.8 3.4 2.0 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator SlyX PF04102.12 ORF18426 - 1.4 9.6 13.9 1.6 9.4 11.1 2.2 1 1 1 2 2 2 0 SlyX 5_nucleotid PF05761.14 ORF18426 - 1.5 7.6 6.8 1.6 7.6 6.8 1.0 1 0 0 1 1 1 0 5' nucleotidase family FapA PF03961.13 ORF18426 - 1.6 7.2 8.2 1.7 7.1 8.2 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A GrpE PF01025.19 ORF18426 - 1.9 8.1 11.0 5 6.8 11.1 1.6 1 1 0 1 1 1 0 GrpE DUF16 PF01519.16 ORF18426 - 2.3 8.8 10.1 4 8.0 10.1 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 TolA_bind_tri PF16331.5 ORF18426 - 2.6 8.2 16.4 22 5.2 16.4 2.0 1 1 0 1 1 1 0 TolA binding protein trimerisation MctB PF11382.8 ORF18426 - 5.5 6.6 6.5 7.3 6.2 6.5 1.5 1 1 0 1 1 1 0 Copper transport outer membrane protein, MctB Baculo_11_kDa PF06143.11 ORF18373 - 0.0085 15.6 0.1 0.011 15.3 0.1 1.2 1 0 0 1 1 1 1 Baculovirus 11 kDa family Aa_trans PF01490.18 ORF18373 - 0.01 14.6 1.3 0.011 14.5 1.3 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Hydrophobin_2 PF06766.11 ORF18151 - 0.018 15.0 0.2 0.93 9.5 0.0 2.1 2 0 0 2 2 2 0 Fungal hydrophobin DUF1430 PF07242.11 ORF18043 - 0.029 14.6 0.2 0.033 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) DUF3804 PF12707.7 ORF16841 - 0.074 12.8 0.1 0.087 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3804) DUF4265 PF14085.6 ORF16268 - 0.075 13.0 0.0 0.084 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) Ras PF00071.22 ORF16184 - 5.2e-19 68.4 0.0 5.7e-19 68.3 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF16184 - 1.8e-16 60.4 0.0 1.8e-16 60.4 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF16184 - 7.5e-07 28.8 0.0 7.8e-07 28.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family DUF2701 PF10857.8 ORF16184 - 0.06 13.4 0.1 0.67 10.0 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2701) Nse5 PF08691.10 ORF15582 - 0.12 11.1 0.1 0.13 10.9 0.1 1.1 1 0 0 1 1 1 0 DNA repair proteins Nse5 and Nse6 Peptidase_M50 PF02163.22 ORF15222 - 2.6e-21 76.0 0.4 2.9e-21 75.9 0.4 1.0 1 0 0 1 1 1 1 Peptidase family M50 Colipase PF01114.18 ORF1507 - 8.6 6.1 10.2 9.2 6.0 6.1 2.6 2 1 1 3 3 3 0 Colipase, N-terminal domain GMP_PDE_delta PF05351.11 ORF14525 - 1.4e-33 116.2 3.0 1.5e-33 116.1 3.0 1.0 1 0 0 1 1 1 1 GMP-PDE, delta subunit DUF1374 PF07118.11 ORF14525 - 0.017 15.6 0.8 0.019 15.5 0.8 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1374) Hen1_Lam_C PF18441.1 ORF13992 - 0.099 12.5 1.5 6.4 6.6 0.1 2.0 1 1 1 2 2 2 0 Hen1 La-motif C-terminal domain CAAD PF14159.6 ORF13799 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase ADPRTs_Tse2 PF18648.1 ORF13682 - 0.11 12.5 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Tse2 ADP-ribosyltransferase toxins Rubella_Capsid PF05750.11 ORF13628 - 0.057 13.0 1.9 0.056 13.0 1.9 1.1 1 0 0 1 1 1 0 Rubella capsid protein Dec-1 PF04624.14 ORF12732 - 8.1 6.4 7.5 19 5.2 7.5 1.6 1 0 0 1 1 1 0 Dec-1 repeat Methyltransf_23 PF13489.6 ORF1266 - 0.12 12.2 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain SelK_SelG PF10961.8 ORF12454 - 2.7e-05 24.7 2.3 3.2e-05 24.4 2.3 1.1 1 0 0 1 1 1 1 Selenoprotein SelK_SelG Basic PF01586.16 ORF112341 - 0.048 14.8 0.2 0.057 14.6 0.2 1.2 1 0 0 1 1 1 0 Myogenic Basic domain TniB PF05621.11 ORF112341 - 0.21 11.0 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein PNPase_C PF12111.8 ORF11217 - 0.057 12.9 0.1 0.08 12.4 0.1 1.2 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal CAAD PF14159.6 ORF11192 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DUF4490 PF14892.6 ORF111346 - 2.9e-07 30.5 0.9 5.7e-07 29.5 0.9 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4490) DUF5394 PF17372.2 ORF111346 - 0.024 14.2 0.2 0.028 14.0 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5394) Plk4_PB2 PF18409.1 ORF111322 - 0.015 16.0 0.2 0.018 15.7 0.2 1.1 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 SAS4 PF15460.6 ORF111322 - 0.045 13.9 0.4 0.06 13.4 0.4 1.2 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 TcdB_N PF12918.7 ORF111322 - 0.2 11.9 4.1 0.25 11.7 0.2 2.0 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain PTPA PF03095.15 ORF111221 - 6.1e-27 94.9 0.1 6.8e-27 94.7 0.1 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein CPDase PF07823.11 ORF110926 - 0.0072 16.0 0.0 0.0076 16.0 0.0 1.0 1 0 0 1 1 1 1 Cyclic phosphodiesterase-like protein OCRE PF17780.1 ORF110646 - 0.041 13.9 0.1 0.068 13.2 0.1 1.4 1 0 0 1 1 1 0 OCRE domain DUF2972 PF11186.8 ORF110420 - 0.0057 16.6 4.7 0.0067 16.4 4.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2972) Pkinase PF00069.25 ORF110246 - 5.5e-14 52.2 0.6 6e-14 52.0 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF110246 - 1.1e-08 34.7 0.2 1.2e-08 34.6 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Peptidase_S39 PF02122.15 ORF109313 - 0.066 12.7 0.1 0.077 12.5 0.1 1.0 1 0 0 1 1 1 0 Peptidase S39 UCH PF00443.29 ORF109184 - 1.4e-05 24.7 0.0 1.4e-05 24.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF2188 PF09954.9 ORF108884 - 0.0058 16.8 5.7 1.3 9.3 2.8 2.5 2 1 0 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2188) AP2 PF00847.20 ORF108884 - 0.022 15.0 2.6 0.022 15.0 2.6 1.6 2 0 0 2 2 2 0 AP2 domain SPOR PF05036.13 ORF108884 - 0.065 13.6 4.6 0.086 13.2 0.3 2.1 1 1 1 2 2 2 0 Sporulation related domain DUF3721 PF12518.8 ORF108884 - 0.21 11.5 2.9 0.53 10.2 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function Arm-DNA-bind_4 PF14657.6 ORF108884 - 0.9 9.3 10.5 4.7 7.1 2.8 2.6 2 1 0 2 2 2 0 Arm DNA-binding domain Fzo_mitofusin PF04799.13 ORF108277 - 0.0033 17.0 3.1 0.005 16.4 3.1 1.3 1 0 0 1 1 1 1 fzo-like conserved region ATPase PF06745.13 ORF108277 - 0.14 11.5 0.7 0.15 11.4 0.7 1.1 1 0 0 1 1 1 0 KaiC Carb_anhydrase PF00194.21 ORF108266 - 0.011 15.3 0.0 0.013 15.0 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic-type carbonic anhydrase ALIX_LYPXL_bnd PF13949.6 ORF107490 - 0.0046 16.3 3.5 0.0048 16.2 3.5 1.1 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV UPF0564 PF10595.9 ORF107490 - 0.04 13.0 5.9 0.043 12.9 5.9 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0564 Ly49 PF08391.10 ORF107490 - 1.1 9.6 6.7 1.2 9.5 6.7 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region NitrOD5 PF11537.8 ORF106943 - 0.02 15.0 0.0 0.024 14.8 0.0 1.1 1 0 0 1 1 1 0 Nitrosopumilus output domain 5 DUF5432 PF17497.2 ORF106783 - 0.0021 18.1 1.3 0.0021 18.1 1.3 1.9 1 1 1 2 2 2 1 Family of unknown function (DUF5432) RGI1 PF10843.8 ORF106577 - 0.11 12.1 0.0 0.12 12.0 0.0 1.0 1 0 0 1 1 1 0 Respiratory growth induced protein 1 DUF5363 PF17320.2 ORF106300 - 0.28 11.1 4.2 0.32 10.9 0.3 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5363) zf-MYST PF17772.1 ORF106232 - 0.025 14.2 5.0 0.33 10.6 0.2 2.5 2 1 0 2 2 2 0 MYST family zinc finger domain PUF PF00806.19 ORF105557 - 4.9e-08 32.2 0.5 7.6e-07 28.5 0.0 2.8 3 0 0 3 3 3 1 Pumilio-family RNA binding repeat RasGAP_C PF03836.15 ORF105557 - 0.025 14.7 2.2 0.028 14.6 2.2 1.1 1 0 0 1 1 1 0 RasGAP C-terminus DUF1647 PF07801.11 ORF104672 - 0.038 13.7 2.0 0.043 13.6 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1647) Spec3 PF15795.5 ORF104476 - 1e-14 54.8 21.6 1.1e-12 48.2 21.6 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein DUF997 PF06196.12 ORF104476 - 1.1 9.3 10.7 2.5 8.2 10.7 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF997) TM2 PF05154.16 ORF104476 - 5.3 7.4 14.3 12 6.3 0.7 2.2 2 0 0 2 2 2 0 TM2 domain Spec3 PF15795.5 ORF104300 - 1.1e-14 54.7 21.0 1.3e-12 48.0 21.0 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein DUF997 PF06196.12 ORF104300 - 2.5 8.2 10.8 5.9 7.0 10.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF997) DUF1201 PF06716.11 ORF104300 - 3.1 7.9 5.6 0.35 10.9 1.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1201) DUF3839 PF12943.7 ORF104134 - 0.033 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) ThrE PF06738.12 ORF103208 - 0.086 12.2 0.0 0.1 12.0 0.0 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter NCE101 PF11654.8 ORF103060 - 0.026 14.2 0.1 0.035 13.8 0.1 1.3 1 0 0 1 1 1 0 Non-classical export protein 1 stn_TNFRSF12A PF12191.8 ORF103060 - 0.27 11.4 3.2 0.36 11.0 3.2 1.4 1 1 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain BEN PF10523.9 ORF102705 - 0.073 13.3 0.1 0.26 11.6 0.0 1.8 1 1 1 2 2 2 0 BEN domain KKLCAg1 PF15204.6 ORF102463 - 0.08 13.0 1.3 0.11 12.7 1.3 1.3 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 TM140 PF14985.6 ORF101798 - 0.055 13.0 1.4 0.055 13.0 1.4 1.1 1 0 0 1 1 1 0 TM140 protein family DUF3719 PF12516.8 ORF101791 - 0.053 13.2 0.1 0.075 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) PsbL PF02419.17 ORF101563 - 7.6e-19 67.4 0.9 1.2e-18 66.7 0.9 1.3 1 0 0 1 1 1 1 PsbL protein C_tripleX PF02363.19 ORF101407 - 0.022 15.0 0.9 0.022 15.0 0.9 1.5 2 0 0 2 2 2 0 Cysteine rich repeat Herpes_glycop_H PF02489.16 ORF101079 - 0.0094 14.5 0.4 0.0099 14.4 0.4 1.0 1 0 0 1 1 1 1 Herpesvirus glycoprotein H main domain HECW1_helix PF18436.1 ORF101079 - 0.073 13.2 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 TusA PF01206.17 ORF100356 - 2.1e-25 88.3 0.0 2.4e-25 88.2 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 ORF100356 - 6.8e-05 22.7 0.1 7.5e-05 22.5 0.1 1.3 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) RNase_P_p30 PF01876.16 NODE_66997_length_238_cov_0.886700_g59056_i0forward_frame_1 - 0.1 12.1 0.2 0.13 11.7 0.2 1.0 1 0 0 1 1 1 0 RNase P subunit p30 RE_EcoO109I PF14511.6 NODE_66987_length_238_cov_1.177340_g59046_i0forward_frame_1 - 0.013 15.1 0.2 0.015 14.9 0.2 1.1 1 0 0 1 1 1 0 Type II restriction endonuclease EcoO109I VirD1 PF07328.11 NODE_66977_length_238_cov_1.270936_g59036_i0reverse_frame_1 - 0.09 12.7 0.2 0.1 12.5 0.2 1.1 1 0 0 1 1 1 0 T-DNA border endonuclease VirD1 DUF3844 PF12955.7 NODE_66971_length_238_cov_1.325123_g59030_i0forward_frame_1 - 0.53 10.4 3.3 0.63 10.2 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) POTRA_2 PF08479.11 NODE_66967_length_238_cov_1.379310_g59026_i0forward_frame_1 - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 POTRA domain, ShlB-type PP2C PF00481.21 NODE_66959_length_238_cov_1.477833_g59018_i0forward_frame_1 - 3.1e-12 46.7 0.0 3.2e-12 46.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C zf-LITAF-like PF10601.9 NODE_66956_length_238_cov_1.517241_g59015_i0forward_frame_1 - 2e-09 37.5 15.8 2.5e-09 37.3 15.8 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain RCC1 PF00415.18 NODE_66953_length_238_cov_1.561576_g59012_i0forward_frame_1 - 1.5e-18 67.2 0.1 3.4e-10 40.4 0.0 2.0 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_66953_length_238_cov_1.561576_g59012_i0forward_frame_1 - 2.3e-14 52.7 3.0 5.3e-11 42.0 0.9 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF2838 PF10998.8 NODE_66950_length_238_cov_1.571429_g59009_i0forward_frame_1 - 1.7 8.9 12.0 1.7 8.9 12.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) CAAX_1 PF15895.5 NODE_66948_length_238_cov_1.576355_g59007_i0forward_frame_1 - 0.046 13.6 3.3 0.052 13.5 3.3 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 Spexin PF15171.6 NODE_66940_length_238_cov_1.635468_g58999_i0forward_frame_1 - 0.069 13.4 0.1 0.098 12.9 0.1 1.4 1 1 0 1 1 1 0 Neuropeptide secretory protein family, NPQ, spexin FerA PF08165.11 NODE_66934_length_238_cov_1.738916_g58993_i0reverse_frame_1 - 0.012 15.6 0.3 0.014 15.3 0.3 1.1 1 0 0 1 1 1 0 FerA (NUC095) domain PAM2 PF07145.15 NODE_66917_length_238_cov_1.940887_g58976_i0reverse_frame_1 - 9.2 6.2 7.6 21 5.1 0.1 3.7 4 0 0 4 4 4 0 Ataxin-2 C-terminal region Lamprin PF06403.11 NODE_66917_length_238_cov_1.940887_g58976_i0forward_frame_1 - 0.13 12.2 4.5 0.17 11.8 4.5 1.2 1 0 0 1 1 1 0 Lamprin GIY-YIG PF01541.24 NODE_66908_length_238_cov_2.137931_g58967_i0forward_frame_1 - 0.051 13.8 0.1 0.065 13.5 0.1 1.1 1 0 0 1 1 1 0 GIY-YIG catalytic domain CobS_N PF12556.8 NODE_66904_length_238_cov_2.246305_g58963_i0reverse_frame_1 - 0.15 11.8 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Cobaltochelatase CobS subunit N terminal CK_II_beta PF01214.18 NODE_66903_length_238_cov_2.251232_g58962_i0reverse_frame_1 - 0.029 14.2 0.4 0.03 14.1 0.4 1.1 1 0 0 1 1 1 0 Casein kinase II regulatory subunit FlhD PF05247.13 NODE_66896_length_238_cov_2.536946_g58955_i0reverse_frame_1 - 3e-25 88.4 1.1 3.4e-25 88.3 1.1 1.0 1 0 0 1 1 1 1 Flagellar transcriptional activator (FlhD) DUF2857 PF11198.8 NODE_66896_length_238_cov_2.536946_g58955_i0reverse_frame_1 - 0.021 14.6 0.4 0.024 14.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) Croc_4 PF17691.1 NODE_66887_length_238_cov_2.753695_g58946_i0forward_frame_1 - 9.5e-05 22.5 2.0 0.00012 22.2 2.0 1.0 1 0 0 1 1 1 1 Contingent replication of cDNA 4 ADH_zinc_N PF00107.26 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 1.6e-10 41.1 0.4 1.6e-10 41.1 0.4 1.5 2 0 0 2 2 2 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 9.1e-06 25.1 1.3 1.1e-05 24.9 1.3 1.0 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Glu_dehyd_C PF16912.5 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.00078 19.0 0.1 0.00084 18.9 0.1 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus TrkA_N PF02254.18 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.015 15.5 0.3 0.019 15.2 0.3 1.1 1 0 0 1 1 1 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.021 14.4 0.4 0.023 14.3 0.4 1.1 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.023 14.0 0.1 0.025 13.9 0.1 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.025 14.8 0.3 0.029 14.6 0.3 1.1 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ThiF PF00899.21 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.053 12.9 2.6 0.039 13.3 1.5 1.3 2 0 0 2 2 2 0 ThiF family RPW8 PF05659.11 NODE_66876_length_238_cov_3.236453_g58935_i0forward_frame_1 - 0.03 14.0 0.1 0.037 13.7 0.1 1.1 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Dimer_Tnp_hAT PF05699.14 NODE_66870_length_238_cov_4.133005_g58929_i0reverse_frame_1 - 0.059 13.2 0.1 0.085 12.7 0.1 1.3 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region SulA PF03846.14 NODE_66869_length_238_cov_4.172414_g58928_i0reverse_frame_1 - 1e-26 93.1 1.0 1.2e-26 92.9 1.0 1.0 1 0 0 1 1 1 1 Cell division inhibitor SulA PPR_2 PF13041.6 NODE_66861_length_238_cov_34.477833_g58920_i0reverse_frame_1 - 0.16 12.2 0.0 0.22 11.8 0.0 1.2 1 0 0 1 1 1 0 PPR repeat family DBD_Tnp_Hermes PF10683.9 NODE_66858_length_238_cov_39.492611_g58917_i0forward_frame_1 - 0.093 12.4 0.4 5.1 6.9 0.4 2.2 2 0 0 2 2 2 0 Hermes transposase DNA-binding domain Bim_N PF06773.11 NODE_66856_length_238_cov_39.748768_g58915_i0reverse_frame_1 - 0.22 11.3 0.4 0.22 11.3 0.4 2.2 2 1 0 2 2 2 0 Bim protein N-terminus Na_K-ATPase PF00287.18 NODE_66851_length_238_cov_46.674877_g58910_i0forward_frame_1 - 0.25 10.5 1.5 0.29 10.3 1.5 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain DUF4627 PF15425.6 NODE_66843_length_238_cov_59.689655_g58902_i0reverse_frame_1 - 0.021 14.5 0.2 0.023 14.3 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4627) SWIM PF04434.17 NODE_66836_length_238_cov_73.502463_g58895_i0forward_frame_1 - 0.18 11.5 5.9 0.21 11.3 5.4 1.4 1 1 0 1 1 1 0 SWIM zinc finger Glyc_hyd_38C_2 PF18230.1 NODE_66835_length_238_cov_74.945813_g58894_i0forward_frame_1 - 0.016 15.3 0.0 0.018 15.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal sub-domain SKI PF01202.22 NODE_66834_length_238_cov_75.556650_g58893_i0forward_frame_1 - 0.027 14.6 0.1 0.028 14.5 0.1 1.0 1 0 0 1 1 1 0 Shikimate kinase Nrap PF03813.14 NODE_66834_length_238_cov_75.556650_g58893_i0forward_frame_1 - 0.04 13.9 0.0 0.042 13.9 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 1 Tissue_fac PF01108.17 NODE_66821_length_238_cov_145.935961_g58880_i0forward_frame_1 - 0.017 14.9 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Tissue factor DUF3463 PF11946.8 NODE_66817_length_238_cov_198.359606_g58876_i0reverse_frame_1 - 0.042 13.7 0.0 0.051 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) DUF3562 PF12085.8 NODE_66814_length_238_cov_240.261084_g58873_i0reverse_frame_1 - 0.049 13.2 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) HXXEE PF13787.6 NODE_66811_length_238_cov_355.857143_g58870_i0forward_frame_1 - 0.57 11.0 4.3 0.67 10.8 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif Helicase_C PF00271.31 NODE_66802_length_239_cov_0.980392_g58861_i0forward_frame_1 - 8.5e-09 35.7 1.3 1.5e-08 34.9 1.3 1.4 1 1 0 1 1 1 1 Helicase conserved C-terminal domain DUF3591 PF12157.8 NODE_66802_length_239_cov_0.980392_g58861_i0forward_frame_1 - 0.017 13.8 0.4 0.017 13.8 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3591) CLTH PF10607.9 NODE_66790_length_239_cov_1.132353_g58849_i0reverse_frame_1 - 0.16 11.9 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain lci PF12197.8 NODE_66779_length_239_cov_1.176471_g58838_i0reverse_frame_1 - 0.11 12.3 0.7 0.11 12.3 0.7 2.4 2 1 0 2 2 2 0 Bacillus cereus group antimicrobial protein DUF3517 PF12030.8 NODE_66779_length_239_cov_1.176471_g58838_i0forward_frame_1 - 0.023 13.6 1.1 0.026 13.5 1.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3517) Keratin_2_head PF16208.5 NODE_66778_length_239_cov_1.176471_g58837_i0forward_frame_1 - 1.3 9.1 8.3 1.5 8.9 8.3 1.0 1 0 0 1 1 1 0 Keratin type II head DUF4222 PF13973.6 NODE_66772_length_239_cov_1.264706_g58831_i0forward_frame_1 - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4222) DUF1298 PF06974.13 NODE_66767_length_239_cov_1.343137_g58826_i0forward_frame_1 - 0.12 12.3 0.0 0.13 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1298) MgrB PF13998.6 NODE_66764_length_239_cov_1.357843_g58823_i0reverse_frame_1 - 0.031 14.2 0.1 0.055 13.4 0.1 1.3 1 0 0 1 1 1 0 MgrB protein DUF3238 PF11579.8 NODE_66761_length_239_cov_1.372549_g58820_i0reverse_frame_1 - 0.013 15.3 0.0 0.014 15.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3238) SIP1 PF04938.12 NODE_66760_length_239_cov_1.372549_g58819_i0forward_frame_1 - 0.066 12.9 0.2 0.082 12.6 0.2 1.0 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) zf-UBP_var PF17807.1 NODE_66759_length_239_cov_1.372549_g58818_i0forward_frame_1 - 0.0085 15.8 0.3 0.012 15.4 0.3 1.2 1 0 0 1 1 1 1 Variant UBP zinc finger Lipase3_N PF03893.16 NODE_66753_length_239_cov_1.446078_g58812_i0reverse_frame_1 - 0.087 12.9 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Lipase 3 N-terminal region Lamprin PF06403.11 NODE_66752_length_239_cov_1.450980_g58811_i0reverse_frame_1 - 0.13 12.2 5.9 0.21 11.5 5.9 1.5 1 1 0 1 1 1 0 Lamprin DUF4946 PF16304.5 NODE_66750_length_239_cov_1.470588_g58809_i0reverse_frame_1 - 0.076 12.7 0.1 0.086 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4946) WD40 PF00400.32 NODE_66750_length_239_cov_1.470588_g58809_i0forward_frame_1 - 1.3e-12 48.0 3.8 1.9e-06 28.5 0.3 2.4 3 0 0 3 3 3 2 WD domain, G-beta repeat Nup160 PF11715.8 NODE_66750_length_239_cov_1.470588_g58809_i0forward_frame_1 - 0.0067 15.1 2.4 0.15 10.7 0.2 2.0 1 1 1 2 2 2 2 Nucleoporin Nup120/160 ANAPC4_WD40 PF12894.7 NODE_66750_length_239_cov_1.470588_g58809_i0forward_frame_1 - 0.012 15.9 0.1 1.3 9.4 0.0 2.0 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain DUF5570 PF17731.1 NODE_66750_length_239_cov_1.470588_g58809_i0forward_frame_1 - 0.1 12.7 0.1 0.17 11.9 0.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5570) APH PF01636.23 NODE_66747_length_239_cov_1.500000_g58806_i0reverse_frame_1 - 0.1 12.5 0.2 0.21 11.5 0.1 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family DUF5616 PF18481.1 NODE_66747_length_239_cov_1.500000_g58806_i0reverse_frame_1 - 0.15 12.4 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5616) HTH_42 PF06224.12 NODE_66746_length_239_cov_1.504902_g58805_i0reverse_frame_1 - 0.029 13.9 0.2 0.035 13.6 0.2 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain HemY_N PF07219.13 NODE_66746_length_239_cov_1.504902_g58805_i0reverse_frame_1 - 0.056 13.7 0.9 0.069 13.3 0.9 1.1 1 0 0 1 1 1 0 HemY protein N-terminus TraE PF05309.11 NODE_66746_length_239_cov_1.504902_g58805_i0reverse_frame_1 - 0.12 11.8 1.4 0.13 11.6 1.4 1.1 1 0 0 1 1 1 0 TraE protein PspB PF06667.12 NODE_66746_length_239_cov_1.504902_g58805_i0reverse_frame_1 - 2.1 8.4 7.1 7.4 6.7 0.0 2.1 1 1 1 2 2 2 0 Phage shock protein B DUF1116 PF06545.11 NODE_66745_length_239_cov_1.509804_g58804_i0reverse_frame_1 - 0.05 13.1 0.1 0.062 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1116) Popeye PF04831.13 NODE_66738_length_239_cov_1.568627_g58797_i0reverse_frame_1 - 0.031 14.5 0.7 0.035 14.3 0.7 1.1 1 0 0 1 1 1 0 Popeye protein conserved region TP6A_N PF04406.14 NODE_66738_length_239_cov_1.568627_g58797_i0forward_frame_1 - 0.072 13.1 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Type IIB DNA topoisomerase COX17 PF05051.13 NODE_66725_length_239_cov_1.691176_g58784_i0forward_frame_1 - 0.026 14.9 5.9 0.041 14.2 5.9 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase copper chaperone (COX17) zf-RanBP PF00641.18 NODE_66721_length_239_cov_1.764706_g58780_i0forward_frame_1 - 9.8 5.6 9.1 2.3 7.6 5.6 1.8 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others DUF3073 PF11273.8 NODE_66720_length_239_cov_1.808824_g58779_i0forward_frame_1 - 0.091 13.5 0.0 0.15 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) fn1 PF00039.18 NODE_66709_length_239_cov_1.985294_g58768_i0reverse_frame_1 - 0.27 11.5 6.1 14 6.0 6.1 2.2 1 1 0 1 1 1 0 Fibronectin type I domain DUF2182 PF09948.9 NODE_66701_length_239_cov_2.127451_g58760_i0reverse_frame_1 - 0.051 13.4 1.3 0.054 13.4 1.3 1.0 1 0 0 1 1 1 0 Predicted metal-binding integral membrane protein (DUF2182) CdhC PF03598.15 NODE_66699_length_239_cov_2.176471_g58758_i0forward_frame_1 - 0.055 13.3 0.1 0.065 13.1 0.1 1.0 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase complex beta subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks300.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks300.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks300.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks300.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NaeI PF09126.10 NODE_66696_length_239_cov_2.240196_g58755_i0reverse_frame_1 - 0.04 13.1 0.0 0.046 12.9 0.0 1.0 1 0 0 1 1 1 0 Restriction endonuclease NaeI K-box PF01486.17 NODE_66692_length_239_cov_2.303922_g58751_i0reverse_frame_1 - 0.02 15.1 1.6 0.027 14.7 1.6 1.2 1 0 0 1 1 1 0 K-box region GIDA PF01134.22 NODE_66692_length_239_cov_2.303922_g58751_i0reverse_frame_1 - 0.11 11.6 0.3 0.1 11.6 0.3 1.0 1 0 0 1 1 1 0 Glucose inhibited division protein A Zip PF02535.22 NODE_66690_length_239_cov_2.338235_g58749_i0reverse_frame_1 - 1.1e-09 38.0 0.1 1.2e-09 37.8 0.1 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter Pex24p PF06398.11 NODE_66690_length_239_cov_2.338235_g58749_i0reverse_frame_1 - 0.12 11.3 0.2 0.2 10.6 0.2 1.4 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2207 PF09972.9 NODE_66690_length_239_cov_2.338235_g58749_i0reverse_frame_1 - 0.53 9.0 2.3 0.59 8.8 2.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Uricase PF01014.18 NODE_66686_length_239_cov_2.357843_g58745_i0reverse_frame_1 - 0.022 15.0 0.2 0.026 14.8 0.2 1.1 1 0 0 1 1 1 0 Uricase DUF1461 PF07314.11 NODE_66685_length_239_cov_2.357843_g58744_i0forward_frame_1 - 0.073 13.0 1.3 0.073 13.0 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) OmpA PF00691.20 NODE_66683_length_239_cov_2.401961_g58742_i0reverse_frame_1 - 1.6e-16 60.4 0.0 1.8e-16 60.3 0.0 1.0 1 0 0 1 1 1 1 OmpA family Nuc_rec_co-act PF08815.10 NODE_66683_length_239_cov_2.401961_g58742_i0reverse_frame_1 - 0.095 12.6 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 Nuclear receptor coactivator AAA PF00004.29 NODE_66683_length_239_cov_2.401961_g58742_i0reverse_frame_1 - 0.11 12.9 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TetR_C_5 PF08360.11 NODE_66680_length_239_cov_2.455882_g58739_i0reverse_frame_1 - 0.0068 16.6 0.4 0.0076 16.4 0.4 1.2 1 0 0 1 1 1 1 QacR-like protein, C-terminal region DUF1664 PF07889.12 NODE_66680_length_239_cov_2.455882_g58739_i0reverse_frame_1 - 0.083 12.9 1.6 0.09 12.8 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Phage_int_SAM_1 PF02899.17 NODE_66678_length_239_cov_2.475490_g58737_i0forward_frame_1 - 0.0052 17.1 0.2 0.0059 16.9 0.2 1.1 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Clat_adaptor_s PF01217.20 NODE_66674_length_239_cov_2.549020_g58733_i0forward_frame_1 - 0.055 13.4 1.4 0.065 13.2 1.4 1.1 1 0 0 1 1 1 0 Clathrin adaptor complex small chain DUF4576 PF15144.6 NODE_66673_length_239_cov_2.549020_g58732_i0reverse_frame_1 - 0.35 10.8 1.5 0.51 10.3 1.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4576) Xan_ur_permease PF00860.20 NODE_66669_length_239_cov_2.764706_g58728_i0forward_frame_1 - 3.9e-10 39.0 6.6 4.1e-10 38.9 6.6 1.0 1 0 0 1 1 1 1 Permease family DLL_N PF12413.8 NODE_66668_length_239_cov_2.769608_g58727_i0forward_frame_1 - 0.067 14.4 0.0 0.077 14.2 0.0 1.1 1 0 0 1 1 1 0 Homeobox protein distal-less-like N terminal SDA1 PF05285.12 NODE_66666_length_239_cov_2.877451_g58725_i0reverse_frame_1 - 0.00098 18.6 4.3 0.0016 18.0 2.2 1.9 1 1 1 2 2 2 1 SDA1 CBP_BcsN PF17038.5 NODE_66661_length_239_cov_3.250000_g58720_i0reverse_frame_1 - 0.045 13.1 0.0 0.055 12.8 0.0 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsN Gag_p15 PF08723.10 NODE_66658_length_239_cov_3.485294_g58717_i0reverse_frame_1 - 0.098 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Gag protein p15 ZapB PF06005.12 NODE_66657_length_239_cov_3.529412_g58716_i0reverse_frame_1 - 0.017 15.5 3.6 0.024 15.1 3.6 1.1 1 0 0 1 1 1 0 Cell division protein ZapB Atg14 PF10186.9 NODE_66657_length_239_cov_3.529412_g58716_i0reverse_frame_1 - 0.018 14.2 1.5 0.019 14.1 1.5 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 SDF PF00375.18 NODE_66654_length_239_cov_3.745098_g58713_i0reverse_frame_1 - 1.9e-20 73.3 6.8 2e-20 73.2 6.8 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family Exo_endo_phos PF03372.23 NODE_66650_length_239_cov_4.656863_g58709_i0forward_frame_1 - 0.04 13.4 0.0 0.045 13.3 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family DAHP_synth_2 PF01474.16 NODE_66645_length_239_cov_6.779412_g58704_i0reverse_frame_1 - 0.034 12.7 0.7 0.035 12.6 0.7 1.0 1 0 0 1 1 1 0 Class-II DAHP synthetase family Terminase_5 PF06056.12 NODE_66624_length_239_cov_46.774510_g58683_i0reverse_frame_1 - 0.085 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) LMP PF04778.12 NODE_66619_length_239_cov_58.107843_g58678_i0reverse_frame_1 - 0.013 15.4 0.0 0.014 15.3 0.0 1.0 1 0 0 1 1 1 0 LMP repeated region DUF4834 PF16118.5 NODE_66615_length_239_cov_64.196078_g58674_i0forward_frame_1 - 6.4 7.8 7.0 9.1 7.3 7.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Zip PF02535.22 NODE_66615_length_239_cov_64.196078_g58674_i0forward_frame_1 - 6.7 5.8 8.5 7.1 5.7 8.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Coilin_N PF15862.5 NODE_66615_length_239_cov_64.196078_g58674_i0forward_frame_1 - 8.2 6.2 11.7 9.5 6.0 11.7 1.1 1 0 0 1 1 1 0 Coilin N-terminus zf_CCCH_4 PF18345.1 NODE_66609_length_239_cov_82.397059_g58668_i0reverse_frame_1 - 0.00062 19.7 1.8 0.0038 17.2 1.8 2.3 1 1 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 NODE_66609_length_239_cov_82.397059_g58668_i0reverse_frame_1 - 0.0049 16.7 1.1 0.018 14.9 1.1 2.1 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_66609_length_239_cov_82.397059_g58668_i0reverse_frame_1 - 0.019 14.8 2.5 0.064 13.1 2.4 1.9 1 1 0 1 1 1 0 CCCH-type zinc finger zf-CCCH_3 PF15663.5 NODE_66609_length_239_cov_82.397059_g58668_i0reverse_frame_1 - 0.021 15.0 1.2 0.021 15.0 1.2 1.2 1 0 0 1 1 1 0 Zinc-finger containing family DUF3949 PF13133.6 NODE_66597_length_239_cov_125.647059_g58656_i0reverse_frame_1 - 0.2 12.1 0.9 0.28 11.7 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3949) Plavaka PF18759.1 NODE_66593_length_239_cov_178.549020_g58652_i0reverse_frame_1 - 0.12 11.6 0.8 0.15 11.2 0.8 1.1 1 0 0 1 1 1 0 Plavaka transposase YMF19 PF02326.15 NODE_66592_length_239_cov_193.318627_g58651_i0reverse_frame_1 - 0.051 14.4 0.1 0.056 14.2 0.1 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 Ribosomal_S18 PF01084.20 NODE_66591_length_239_cov_194.480392_g58650_i0forward_frame_1 - 0.037 14.3 0.1 0.1 12.9 0.0 1.7 1 1 1 2 2 2 0 Ribosomal protein S18 LEAP-2 PF07359.11 NODE_66585_length_239_cov_370.759804_g58644_i0reverse_frame_1 - 0.12 12.3 0.2 0.15 11.9 0.2 1.2 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) DUF543 PF04418.12 NODE_66577_length_240_cov_0.780488_g58636_i0forward_frame_1 - 0.11 12.5 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF543) SUN PF03856.13 NODE_66575_length_240_cov_0.897561_g58634_i0reverse_frame_1 - 0.015 14.7 0.2 0.016 14.7 0.2 1.1 1 0 0 1 1 1 0 Beta-glucosidase (SUN family) Peptidase_C2 PF00648.21 NODE_66571_length_240_cov_0.975610_g58630_i0reverse_frame_1 - 4.1e-12 45.7 0.0 4.5e-12 45.6 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease RCC1_2 PF13540.6 NODE_66566_length_240_cov_1.112195_g58625_i0reverse_frame_1 - 0.015 15.1 0.3 0.025 14.4 0.3 1.4 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat RVT_1 PF00078.27 NODE_66565_length_240_cov_1.126829_g58624_i0reverse_frame_1 - 0.068 12.7 0.1 0.078 12.5 0.1 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) G3P_acyltransf PF02660.15 NODE_66562_length_240_cov_1.156098_g58621_i0forward_frame_1 - 1.5 8.9 11.3 1.8 8.6 11.3 1.0 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase Endothelin PF00322.17 NODE_66558_length_240_cov_1.170732_g58617_i0reverse_frame_1 - 0.33 10.6 9.0 0.38 10.4 3.2 2.1 2 0 0 2 2 2 0 Endothelin family Vps16_C PF04840.12 NODE_66554_length_240_cov_1.248780_g58613_i0forward_frame_1 - 0.016 14.3 0.0 0.018 14.1 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region KIX PF02172.16 NODE_66552_length_240_cov_1.287805_g58611_i0forward_frame_1 - 0.036 14.3 0.5 0.055 13.7 0.5 1.3 1 0 0 1 1 1 0 KIX domain HTH_11 PF08279.12 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.00025 20.9 0.0 0.00035 20.5 0.0 1.2 1 0 0 1 1 1 1 HTH domain Sigma70_r4_2 PF08281.12 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0011 18.6 0.0 0.0017 18.0 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0014 18.4 0.0 0.0019 17.9 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain Phage_terminase PF10668.9 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0023 17.9 0.1 0.0028 17.6 0.1 1.3 1 0 0 1 1 1 1 Phage terminase small subunit Sigma70_r4 PF04545.16 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0032 17.0 0.0 0.0048 16.4 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 DUF1804 PF08822.11 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0058 16.6 0.2 0.007 16.4 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1804) GerE PF00196.19 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0094 15.5 0.1 0.013 15.0 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_36 PF13730.6 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.022 14.7 0.1 0.034 14.1 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.03 13.9 0.0 0.045 13.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding YfhO PF09586.10 NODE_66533_length_240_cov_1.478049_g58592_i0reverse_frame_1 - 0.18 10.0 0.4 0.19 9.9 0.4 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO RabGAP-TBC PF00566.18 NODE_66529_length_240_cov_1.526829_g58588_i0reverse_frame_1 - 2.3e-17 63.4 1.0 2.7e-17 63.1 1.0 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain LexA_DNA_bind PF01726.16 NODE_66528_length_240_cov_1.531707_g58587_i0reverse_frame_1 - 0.19 11.5 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain Fanconi_C PF02106.15 NODE_66523_length_240_cov_1.556098_g58582_i0forward_frame_1 - 0.0045 15.8 0.0 0.0052 15.6 0.0 1.0 1 0 0 1 1 1 1 Fanconi anaemia group C protein DEAD PF00270.29 NODE_66523_length_240_cov_1.556098_g58582_i0forward_frame_1 - 0.081 12.7 0.0 0.51 10.1 0.0 1.9 1 1 1 2 2 2 0 DEAD/DEAH box helicase Urocanase_N PF17391.2 NODE_66523_length_240_cov_1.556098_g58582_i0forward_frame_1 - 0.098 12.3 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Urocanase N-terminal domain Ras PF00071.22 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 5.1e-23 81.5 0.5 5.4e-23 81.4 0.5 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 6e-05 23.2 0.1 0.0001 22.5 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 0.01 15.3 0.1 0.01 15.3 0.1 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 0.043 13.8 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain GTP_EFTU PF00009.27 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 0.095 12.2 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Ion_trans PF00520.31 NODE_66512_length_240_cov_1.673171_g58571_i0forward_frame_1 - 0.00033 19.9 5.3 0.00042 19.6 5.3 1.0 1 0 0 1 1 1 1 Ion transport protein DUF4062 PF13271.6 NODE_66511_length_240_cov_1.678049_g58570_i0forward_frame_1 - 0.072 13.5 0.0 0.077 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4062) DUF1242 PF06842.12 NODE_66507_length_240_cov_1.712195_g58566_i0forward_frame_1 - 0.06 13.2 2.4 0.15 11.9 2.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1242) Tafi-CsgC PF10610.9 NODE_66507_length_240_cov_1.712195_g58566_i0forward_frame_1 - 0.066 13.4 0.2 0.081 13.1 0.2 1.2 1 0 0 1 1 1 0 Thin aggregative fimbriae synthesis protein polyprenyl_synt PF00348.17 NODE_66499_length_240_cov_1.853659_g58558_i0reverse_frame_1 - 0.00091 18.4 0.0 0.001 18.2 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase C1-set PF07654.15 NODE_66489_length_240_cov_1.931707_g58548_i0reverse_frame_1 - 0.067 13.6 0.0 0.088 13.2 0.0 1.1 1 0 0 1 1 1 0 Immunoglobulin C1-set domain DUF4860 PF16152.5 NODE_66486_length_240_cov_1.946341_g58545_i0reverse_frame_1 - 0.019 14.8 0.0 0.022 14.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4860) TRP PF06011.12 NODE_66485_length_240_cov_1.946341_g58544_i0reverse_frame_1 - 6.1e-07 28.5 2.0 6.6e-07 28.4 2.0 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Asparaginase PF00710.20 NODE_66484_length_240_cov_1.946341_g58543_i0reverse_frame_1 - 2.3e-06 27.3 0.2 2.7e-06 27.1 0.2 1.1 1 0 0 1 1 1 1 Asparaginase, N-terminal MASE1 PF05231.14 NODE_66484_length_240_cov_1.946341_g58543_i0reverse_frame_1 - 0.068 12.3 0.4 0.075 12.2 0.4 1.0 1 0 0 1 1 1 0 MASE1 Tic110 PF16940.5 NODE_66484_length_240_cov_1.946341_g58543_i0reverse_frame_1 - 0.17 10.4 0.8 0.17 10.3 0.8 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter Pkinase PF00069.25 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 8.7e-14 51.5 2.0 9.2e-14 51.4 2.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 7.5e-07 28.7 0.2 8.5e-07 28.5 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 0.0047 16.3 0.1 0.0055 16.1 0.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 0.008 15.8 0.3 0.0088 15.7 0.3 1.0 1 0 0 1 1 1 1 RIO1 family Pox_ser-thr_kin PF05445.11 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 0.012 14.6 1.7 0.012 14.6 1.7 1.6 1 1 0 2 2 2 0 Poxvirus serine/threonine protein kinase Mad3_BUB1_I_2 PF17014.5 NODE_66472_length_240_cov_2.121951_g58531_i0reverse_frame_1 - 0.018 15.2 0.2 0.02 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein Ion_trans PF00520.31 NODE_66470_length_240_cov_2.131707_g58529_i0forward_frame_1 - 0.0001 21.7 2.2 0.0001 21.6 2.2 1.0 1 0 0 1 1 1 1 Ion transport protein DUF416 PF04222.12 NODE_66469_length_240_cov_2.136585_g58528_i0forward_frame_1 - 3.3e-30 104.9 0.0 3.5e-30 104.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF416) DUF4713 PF15831.5 NODE_66458_length_240_cov_2.263415_g58517_i0forward_frame_1 - 0.006 17.0 1.3 0.009 16.4 1.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4713) RVT_1 PF00078.27 NODE_66457_length_240_cov_2.282927_g58516_i0reverse_frame_1 - 7.8e-09 35.4 0.0 8.5e-09 35.2 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4961 PF16328.5 NODE_66455_length_240_cov_2.312195_g58514_i0reverse_frame_1 - 0.11 11.8 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4961) DUF169 PF02596.15 NODE_66451_length_240_cov_2.429268_g58510_i0reverse_frame_1 - 0.0062 16.5 0.0 0.0063 16.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 RICTOR_M PF14666.6 NODE_66443_length_240_cov_2.760976_g58502_i0forward_frame_1 - 0.077 12.8 0.1 0.099 12.4 0.1 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain Recombinase PF07508.13 NODE_66442_length_240_cov_2.775610_g58501_i0forward_frame_1 - 4.6e-11 43.0 0.0 5.7e-11 42.7 0.0 1.1 1 0 0 1 1 1 1 Recombinase Vac14_Fab1_bd PF12755.7 NODE_66440_length_240_cov_2.809756_g58499_i0forward_frame_1 - 0.083 13.5 0.1 0.096 13.3 0.1 1.2 1 0 0 1 1 1 0 Vacuolar 14 Fab1-binding region DNA_pol_B_thumb PF14791.6 NODE_66440_length_240_cov_2.809756_g58499_i0forward_frame_1 - 0.13 12.4 0.1 0.15 12.3 0.1 1.1 1 0 0 1 1 1 0 DNA polymerase beta thumb NIR_SIR PF01077.22 NODE_66429_length_240_cov_5.682927_g58488_i0reverse_frame_1 - 0.021 14.3 0.0 0.024 14.2 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain DUF5554 PF17709.1 NODE_66425_length_240_cov_17.775610_g58484_i0forward_frame_1 - 0.045 13.9 2.2 0.063 13.4 2.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5554) CAP160 PF07918.11 NODE_66423_length_240_cov_28.965854_g58482_i0reverse_frame_1 - 0.18 11.6 0.0 0.26 11.1 0.0 1.1 1 0 0 1 1 1 0 CAP160 repeat Acylphosphatase PF00708.18 NODE_66423_length_240_cov_28.965854_g58482_i0forward_frame_1 - 0.013 15.9 0.2 0.021 15.2 0.2 1.4 1 1 0 1 1 1 0 Acylphosphatase PDH_E1_M PF17831.1 NODE_66423_length_240_cov_28.965854_g58482_i0forward_frame_1 - 0.061 12.8 0.1 0.066 12.7 0.1 1.1 1 0 0 1 1 1 0 Pyruvate dehydrogenase E1 component middle domain DUF5402 PF17393.2 NODE_66423_length_240_cov_28.965854_g58482_i0forward_frame_1 - 0.07 13.1 0.1 0.082 12.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5402) DUF3721 PF12518.8 NODE_66423_length_240_cov_28.965854_g58482_i0forward_frame_1 - 0.14 12.0 0.0 0.29 11.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF4692 PF15763.5 NODE_66421_length_240_cov_30.980488_g58480_i0forward_frame_1 - 0.37 11.3 8.2 0.43 11.0 8.2 1.2 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) SR-25 PF10500.9 NODE_66421_length_240_cov_30.980488_g58480_i0forward_frame_1 - 2.4 7.7 22.0 2.5 7.6 22.0 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CCDC106 PF15794.5 NODE_66421_length_240_cov_30.980488_g58480_i0forward_frame_1 - 6.5 6.4 15.8 7.1 6.3 15.8 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 HGTP_anticodon2 PF12745.7 NODE_66421_length_240_cov_30.980488_g58480_i0forward_frame_1 - 7.4 6.0 11.4 8.1 5.9 11.4 1.0 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs Kelch_5 PF13854.6 NODE_66419_length_240_cov_32.297561_g58478_i0forward_frame_1 - 0.00041 20.3 0.0 0.00055 19.9 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 NODE_66419_length_240_cov_32.297561_g58478_i0forward_frame_1 - 0.12 12.4 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain Occludin_ELL PF07303.13 NODE_66417_length_240_cov_32.829268_g58476_i0forward_frame_1 - 0.038 14.7 0.8 0.053 14.3 0.8 1.2 1 0 0 1 1 1 0 Occludin homology domain YtxH PF12732.7 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 0.0034 17.9 8.3 0.0044 17.5 8.3 1.1 1 0 0 1 1 1 1 YtxH-like protein RRF PF01765.19 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 0.0038 17.2 6.5 0.0044 17.0 6.5 1.1 1 0 0 1 1 1 1 Ribosome recycling factor DUF883 PF05957.13 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 0.028 15.0 0.6 0.034 14.8 0.6 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) SNARE PF05739.19 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 2.7 8.0 6.9 1.7 8.7 1.4 2.2 2 0 0 2 2 2 0 SNARE domain ETRAMP PF09716.10 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 4.5 7.4 13.7 1.8e+02 2.2 13.7 2.1 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) SR-25 PF10500.9 NODE_66411_length_240_cov_40.843902_g58470_i0reverse_frame_1 - 0.036 13.7 9.6 0.041 13.5 9.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Glutaminase PF04960.15 NODE_66399_length_240_cov_53.043902_g58458_i0reverse_frame_1 - 0.056 12.6 0.0 0.056 12.6 0.0 1.1 1 0 0 1 1 1 0 Glutaminase PHAT PF09246.10 NODE_66398_length_240_cov_53.058537_g58457_i0forward_frame_1 - 0.12 12.2 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 PHAT Glyco_hydro_42C PF08533.10 NODE_66398_length_240_cov_53.058537_g58457_i0forward_frame_1 - 0.13 12.0 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain PaRep2a PF07903.11 NODE_66398_length_240_cov_53.058537_g58457_i0forward_frame_1 - 0.16 11.8 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 PaRep2a protein ORC5_C PF14630.6 NODE_66394_length_240_cov_57.736585_g58453_i0forward_frame_1 - 0.031 13.8 0.2 0.034 13.7 0.2 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus DUF2102 PF09875.9 NODE_66392_length_240_cov_62.107317_g58451_i0reverse_frame_1 - 0.039 13.7 0.6 0.051 13.3 0.6 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) Ntox46 PF15538.6 NODE_66391_length_240_cov_68.682927_g58450_i0reverse_frame_1 - 0.03 14.3 0.4 0.03 14.3 0.4 1.1 1 0 0 1 1 1 0 Bacterial toxin 46 CENP-B_dimeris PF09026.10 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 0.038 14.4 4.0 0.042 14.2 4.0 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain YL1 PF05764.13 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 0.061 13.4 12.6 0.073 13.2 12.6 1.0 1 0 0 1 1 1 0 YL1 nuclear protein DUF4225 PF13988.6 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 0.091 12.3 1.5 0.13 11.8 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4225) VIT1 PF01988.19 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 1.4 8.8 3.3 1.4 8.7 3.3 1.0 1 0 0 1 1 1 0 VIT family CDC45 PF02724.14 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 2 6.6 8.7 2.3 6.4 8.7 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF2614 PF11023.8 NODE_66385_length_240_cov_79.126829_g58444_i0forward_frame_1 - 0.11 12.6 3.7 0.13 12.3 3.7 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain Coronavirus_5 PF05528.11 NODE_66383_length_240_cov_81.604878_g58442_i0reverse_frame_1 - 0.11 12.5 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Coronavirus gene 5 protein DUF836 PF05768.14 NODE_66383_length_240_cov_81.604878_g58442_i0forward_frame_1 - 0.11 12.9 0.5 0.55 10.7 0.5 1.9 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Lipocalin_2 PF08212.12 NODE_66379_length_240_cov_98.102439_g58438_i0forward_frame_1 - 8.9e-17 61.4 0.0 1e-16 61.2 0.0 1.0 1 0 0 1 1 1 1 Lipocalin-like domain Lipocalin PF00061.23 NODE_66379_length_240_cov_98.102439_g58438_i0forward_frame_1 - 0.0027 17.9 0.0 0.0031 17.7 0.0 1.1 1 0 0 1 1 1 1 Lipocalin / cytosolic fatty-acid binding protein family UBA_6 PF18039.1 NODE_66379_length_240_cov_98.102439_g58438_i0forward_frame_1 - 0.074 13.0 0.0 0.099 12.6 0.0 1.2 1 0 0 1 1 1 0 UBA-like domain Coat_F PF07875.12 NODE_66375_length_240_cov_108.214634_g58434_i0reverse_frame_1 - 0.13 12.6 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Coat F domain MgrB PF13998.6 NODE_66373_length_240_cov_115.760976_g58432_i0forward_frame_1 - 0.013 15.4 0.1 0.028 14.3 0.1 1.6 1 0 0 1 1 1 0 MgrB protein DUF3212 PF11486.8 NODE_66361_length_240_cov_178.248780_g58420_i0reverse_frame_1 - 0.081 13.0 0.4 0.089 12.8 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3212) RCC1_2 PF13540.6 NODE_66360_length_240_cov_221.126829_g58419_i0reverse_frame_1 - 6.4e-05 22.6 0.5 0.35 10.7 0.0 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 NODE_66360_length_240_cov_221.126829_g58419_i0reverse_frame_1 - 0.74 9.9 5.5 3.1 7.8 0.7 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Integrase_Zn PF02022.19 NODE_66360_length_240_cov_221.126829_g58419_i0forward_frame_1 - 0.011 15.7 0.4 3.3 7.7 0.0 2.5 2 1 0 2 2 2 0 Integrase Zinc binding domain Sua5_yciO_yrdC PF01300.18 NODE_66359_length_240_cov_262.258537_g58418_i0forward_frame_1 - 0.074 12.5 0.1 6.1 6.3 0.0 2.0 1 1 0 2 2 2 0 Telomere recombination IBR PF01485.21 NODE_66343_length_241_cov_1.038835_g58402_i0reverse_frame_2 - 1.1e-08 35.1 3.6 1.3e-08 34.9 3.6 1.1 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain OrfB_Zn_ribbon PF07282.11 NODE_66343_length_241_cov_1.038835_g58402_i0reverse_frame_2 - 0.024 14.6 1.8 0.031 14.2 1.8 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF2318 PF10080.9 NODE_66343_length_241_cov_1.038835_g58402_i0reverse_frame_2 - 0.045 13.9 1.8 0.054 13.6 1.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) zf-ribbon_3 PF13248.6 NODE_66343_length_241_cov_1.038835_g58402_i0reverse_frame_2 - 0.24 10.9 7.0 1.5 8.4 0.5 2.5 2 1 0 2 2 2 0 zinc-ribbon domain zf-ACC PF17848.1 NODE_66343_length_241_cov_1.038835_g58402_i0reverse_frame_2 - 0.29 11.2 0.6 0.29 11.2 0.6 2.5 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain PhnA_Zn_Ribbon PF08274.12 NODE_66343_length_241_cov_1.038835_g58402_i0reverse_frame_2 - 0.54 10.2 5.9 5.3 7.1 5.9 2.1 1 1 0 1 1 1 0 PhnA Zinc-Ribbon Prok-RING_4 PF14447.6 NODE_66343_length_241_cov_1.038835_g58402_i0reverse_frame_2 - 2.1 8.3 9.9 3 7.8 3.7 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 RdRP PF05183.12 NODE_66339_length_241_cov_1.063107_g58398_i0reverse_frame_3 - 2.7e-05 23.0 0.0 2.8e-05 23.0 0.0 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase Lys PF00062.20 NODE_66337_length_241_cov_1.140777_g58396_i0forward_frame_2 - 0.018 15.3 0.7 0.028 14.6 0.7 1.4 1 1 0 1 1 1 0 C-type lysozyme/alpha-lactalbumin family Thioredoxin_16 PF18569.1 NODE_66337_length_241_cov_1.140777_g58396_i0forward_frame_2 - 0.049 13.8 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain SRTM1 PF15872.5 NODE_66335_length_241_cov_1.155340_g58394_i0reverse_frame_2 - 0.0061 16.7 2.7 0.0075 16.4 2.7 1.1 1 0 0 1 1 1 1 Serine-rich and transmembrane domain-containing protein 1 FAR1 PF03101.15 NODE_66332_length_241_cov_1.160194_g58391_i0forward_frame_3 - 0.057 14.1 1.1 0.064 13.9 1.1 1.1 1 0 0 1 1 1 0 FAR1 DNA-binding domain MnhB PF04039.13 NODE_66332_length_241_cov_1.160194_g58391_i0forward_frame_2 - 0.1 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain related to MnhB subunit of Na+/H+ antiporter RCC1_2 PF13540.6 NODE_66331_length_241_cov_1.165049_g58390_i0reverse_frame_3 - 0.12 12.3 0.1 0.31 10.9 0.0 1.7 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat CKS PF01111.19 NODE_66328_length_241_cov_1.165049_g58387_i0reverse_frame_3 - 2.2e-12 47.1 0.9 2.8e-12 46.7 0.9 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase regulatory subunit CblD PF07434.11 NODE_66328_length_241_cov_1.165049_g58387_i0reverse_frame_2 - 0.17 10.8 0.0 0.18 10.7 0.0 1.0 1 0 0 1 1 1 0 CblD like pilus biogenesis initiator Gsf2 PF11055.8 NODE_66328_length_241_cov_1.165049_g58387_i0forward_frame_2 - 0.081 11.7 0.2 0.083 11.6 0.2 1.0 1 0 0 1 1 1 0 Glucose signalling factor 2 TBPIP PF07106.13 NODE_66326_length_241_cov_1.247573_g58385_i0reverse_frame_2 - 0.074 13.0 0.2 0.13 12.2 0.2 1.4 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain UPF0093 PF03653.13 NODE_66320_length_241_cov_1.344660_g58379_i0forward_frame_2 - 0.071 13.3 0.0 0.072 13.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) DUF1033 PF06279.11 NODE_66319_length_241_cov_1.354369_g58378_i0reverse_frame_3 - 0.03 14.5 0.6 0.035 14.3 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1033) RPW8 PF05659.11 NODE_66319_length_241_cov_1.354369_g58378_i0reverse_frame_3 - 0.053 13.2 0.1 0.063 13.0 0.1 1.2 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Sad1_UNC PF07738.13 NODE_66316_length_241_cov_1.359223_g58375_i0reverse_frame_3 - 0.043 13.8 0.3 0.043 13.8 0.3 1.1 1 0 0 1 1 1 0 Sad1 / UNC-like C-terminal Kindlin_2_N PF18124.1 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_3 - 0.062 13.5 0.7 0.07 13.3 0.7 1.2 1 0 0 1 1 1 0 Kindlin-2 N-terminal domain AAA_6 PF12774.7 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 8.4e-43 146.6 0.2 9e-43 146.5 0.2 1.0 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_5 PF07728.14 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 4.6e-05 23.4 0.0 0.0023 17.9 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.00028 21.3 0.0 0.00032 21.1 0.0 1.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.00053 20.5 0.0 0.00065 20.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.018 15.4 0.1 0.034 14.5 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_7 PF12775.7 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.038 13.5 0.0 0.11 11.9 0.0 1.6 1 1 1 2 2 2 0 P-loop containing dynein motor region RNA_helicase PF00910.22 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.04 14.3 0.0 0.048 14.0 0.0 1.2 1 0 0 1 1 1 0 RNA helicase AAA_22 PF13401.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.088 13.1 0.2 0.2 11.9 0.0 1.6 1 1 1 2 2 2 0 AAA domain AAA_28 PF13521.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.089 13.0 0.1 0.097 12.9 0.1 1.3 1 1 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.092 12.5 0.1 0.092 12.5 0.1 1.2 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.12 12.1 0.5 0.35 10.6 0.4 1.6 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.12 12.1 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF4632 PF15451.6 NODE_66311_length_241_cov_1.398058_g58370_i0reverse_frame_3 - 0.036 14.1 2.5 5 7.3 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4632) DUF3008 PF11450.8 NODE_66305_length_241_cov_1.436893_g58364_i0reverse_frame_2 - 0.064 13.4 0.2 0.099 12.8 0.1 1.4 1 1 0 1 1 1 0 Protein of unknwon function (DUF3008) Sas10_Utp3 PF04000.15 NODE_66305_length_241_cov_1.436893_g58364_i0forward_frame_2 - 0.046 14.4 0.2 0.048 14.3 0.2 1.1 1 0 0 1 1 1 0 Sas10/Utp3/C1D family Spc7_N PF15402.6 NODE_66305_length_241_cov_1.436893_g58364_i0forward_frame_2 - 0.28 9.4 5.4 0.32 9.2 5.4 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 SR-25 PF10500.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.0066 16.1 22.3 0.0077 15.9 22.3 1.2 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein DUF4604 PF15377.6 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.028 14.9 15.0 0.03 14.7 15.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) AP3D1 PF06375.11 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.048 13.9 18.2 0.052 13.8 18.2 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Med19 PF10278.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.12 12.3 20.5 0.12 12.3 20.5 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF4770 PF15994.5 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.17 12.1 11.0 0.19 12.0 11.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) HA2 PF04408.23 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.19 12.0 3.8 0.23 11.8 3.8 1.1 1 0 0 1 1 1 0 Helicase associated domain (HA2) RNA_polI_A34 PF08208.11 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.4 10.7 21.5 0.42 10.7 21.5 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Eapp_C PF10238.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 1.2 9.2 9.0 1.4 9.0 9.0 1.1 1 0 0 1 1 1 0 E2F-associated phosphoprotein EIIBC-GUT_N PF03612.14 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 1.3 8.7 6.7 1.3 8.7 6.7 1.1 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Peptidase_S49_N PF08496.10 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 1.3 9.0 15.7 1.4 8.9 15.7 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Sec62 PF03839.16 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 1.5 8.2 11.5 1.6 8.2 11.5 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Connexin PF00029.19 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 2.1 8.0 10.3 2.3 7.9 10.3 1.1 1 0 0 1 1 1 0 Connexin DUF1682 PF07946.14 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 4.2 6.5 17.7 4.2 6.5 17.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) TMEM214 PF10151.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 4.8 5.5 13.4 4.4 5.6 13.4 1.0 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator OAD_gamma PF04277.13 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 6.6 7.4 7.4 11 6.7 7.4 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain O-antigen_lig PF13425.6 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 6.6 5.4 6.4 6.1 5.5 6.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Peroxin-13_N PF04088.13 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 7.1 6.9 6.5 8.5 6.6 6.5 1.1 1 0 0 1 1 1 0 Peroxin 13, N-terminal region MscS_TM PF12794.7 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 7.1 5.4 7.2 8.2 5.2 7.2 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Presenilin PF01080.17 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 9 4.9 7.4 8.2 5.1 7.4 1.0 1 0 0 1 1 1 0 Presenilin DUF4501 PF14946.6 NODE_66303_length_241_cov_1.446602_g58362_i0forward_frame_3 - 0.12 12.4 0.4 0.14 12.2 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Baculo_LEF-2 PF03041.14 NODE_66296_length_241_cov_1.509709_g58355_i0reverse_frame_3 - 0.023 14.4 1.4 0.028 14.1 1.4 1.1 1 0 0 1 1 1 0 lef-2 Cytochrom_B562 PF07361.11 NODE_66295_length_241_cov_1.509709_g58354_i0reverse_frame_3 - 0.034 14.8 0.1 0.034 14.8 0.1 1.1 1 0 0 1 1 1 0 Cytochrome b562 TFIIS_M PF07500.14 NODE_66295_length_241_cov_1.509709_g58354_i0reverse_frame_3 - 0.057 13.9 0.1 0.061 13.8 0.1 1.1 1 0 0 1 1 1 0 Transcription factor S-II (TFIIS), central domain Annexin_like PF18411.1 NODE_66295_length_241_cov_1.509709_g58354_i0reverse_frame_3 - 0.12 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Annexin-like domain CUTL PF16557.5 NODE_66293_length_241_cov_1.529126_g58352_i0reverse_frame_3 - 0.05 13.8 0.9 0.063 13.5 0.9 1.2 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB CcmD PF04995.14 NODE_66287_length_241_cov_1.553398_g58346_i0reverse_frame_3 - 0.02 15.0 0.3 0.041 14.0 0.3 1.4 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Tsg PF04668.12 NODE_66287_length_241_cov_1.553398_g58346_i0reverse_frame_2 - 0.016 15.9 0.4 0.019 15.6 0.4 1.1 1 0 0 1 1 1 0 Twisted gastrulation (Tsg) protein conserved region WD40_alt PF14077.6 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.00048 19.9 1.3 0.00091 19.0 1.1 1.6 1 1 0 1 1 1 1 Alternative WD40 repeat motif Prefoldin PF02996.17 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.012 15.5 0.3 0.016 15.1 0.3 1.2 1 0 0 1 1 1 0 Prefoldin subunit SAC3_GANP PF03399.16 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.019 14.4 0.6 0.021 14.2 0.6 1.0 1 0 0 1 1 1 0 SAC3/GANP family NRIP1_repr_4 PF15690.5 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.029 13.7 1.2 0.033 13.5 1.2 1.0 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 4 MAD PF05557.13 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.04 12.3 5.7 0.043 12.2 5.7 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein MbeD_MobD PF04899.12 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.083 13.0 1.2 0.11 12.6 1.2 1.2 1 0 0 1 1 1 0 MbeD/MobD like DUF1980 PF09323.10 NODE_66284_length_241_cov_1.592233_g58343_i0forward_frame_3 - 1.9 8.4 8.5 2.4 8.0 8.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) TbpB_C PF17483.2 NODE_66283_length_241_cov_1.611650_g58342_i0reverse_frame_3 - 0.018 15.4 0.0 0.018 15.4 0.0 1.1 1 0 0 1 1 1 0 C-lobe handle domain of Tf-binding protein B RICTOR_M PF14666.6 NODE_66283_length_241_cov_1.611650_g58342_i0reverse_frame_2 - 0.038 13.8 0.1 0.043 13.6 0.1 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain gag_pre-integrs PF13976.6 NODE_66282_length_241_cov_1.616505_g58341_i0reverse_frame_3 - 0.051 13.5 3.0 0.07 13.0 3.0 1.4 1 1 0 1 1 1 0 GAG-pre-integrase domain Fer4_8 PF13183.6 NODE_66276_length_241_cov_1.718447_g58335_i0reverse_frame_3 - 0.0064 16.9 0.0 0.0064 16.9 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain NARP1 PF12569.8 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 2.8e-05 23.3 1.3 2.9e-05 23.2 1.3 1.0 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 ANAPC3 PF12895.7 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 5.8e-05 23.2 4.4 0.0026 18.0 0.3 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.00048 20.6 1.2 0.00048 20.6 1.2 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.00066 20.2 0.2 0.0084 16.7 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.0019 18.8 0.0 0.016 16.0 0.0 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.004 16.9 0.4 0.02 14.7 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.013 15.8 0.9 0.11 12.8 0.5 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat UPF0697 PF15117.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.013 15.6 1.5 0.013 15.5 0.8 1.4 1 1 0 1 1 1 0 Uncharacterised protein family UPF0697 TPR_11 PF13414.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.014 15.1 0.2 0.03 14.0 0.2 1.6 1 1 0 1 1 1 0 TPR repeat TPR_2 PF07719.17 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.033 14.3 3.0 0.042 14.0 0.0 2.5 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_20 PF14561.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.14 12.5 1.0 2.8 8.4 0.4 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.36 11.2 0.1 0.36 11.2 0.1 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.61 10.6 3.8 0.7 10.4 0.4 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat Herpes_UL73 PF03554.13 NODE_66268_length_241_cov_1.805825_g58327_i0reverse_frame_2 - 0.043 13.8 0.0 0.065 13.2 0.0 1.3 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein DUF4749 PF15936.5 NODE_66268_length_241_cov_1.805825_g58327_i0forward_frame_3 - 0.051 14.7 0.1 0.06 14.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4749) Prolactin_RP PF15172.6 NODE_66264_length_241_cov_1.864078_g58323_i0reverse_frame_2 - 0.011 15.4 0.7 0.016 14.8 0.1 1.6 2 0 0 2 2 2 0 Prolactin-releasing peptide DUF986 PF06173.12 NODE_66262_length_241_cov_1.868932_g58321_i0forward_frame_3 - 0.029 14.4 0.3 0.036 14.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF986) PRIMA1 PF16101.5 NODE_66260_length_241_cov_1.878641_g58319_i0forward_frame_3 - 0.18 11.9 3.7 0.19 11.8 3.7 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 bZIP_1 PF00170.21 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 1.2e-11 44.5 9.2 1.2e-11 44.5 9.2 1.4 1 1 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 9.7e-07 28.8 9.3 2.3e-06 27.6 8.7 1.9 1 1 1 2 2 2 1 Basic region leucine zipper HALZ PF02183.18 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.0014 18.8 4.3 0.0021 18.2 4.3 1.3 1 0 0 1 1 1 1 Homeobox associated leucine zipper Shugoshin_N PF07558.11 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.034 14.0 3.0 0.042 13.7 1.3 2.0 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region Herpes_BLRF2 PF05812.12 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.04 14.1 0.6 0.04 14.1 0.6 2.1 1 1 1 2 2 2 0 Herpesvirus BLRF2 protein TSC22 PF01166.18 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.045 14.1 0.4 0.088 13.1 0.4 1.6 1 0 0 1 1 1 0 TSC-22/dip/bun family DUF3450 PF11932.8 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.049 12.9 3.9 0.051 12.9 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DivIC PF04977.15 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.064 13.0 4.3 0.099 12.4 4.3 1.4 1 0 0 1 1 1 0 Septum formation initiator bZIP_Maf PF03131.17 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.13 12.8 8.7 0.12 12.9 7.9 1.4 1 1 1 2 2 2 0 bZIP Maf transcription factor FlaG PF03646.15 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.29 11.3 5.1 0.36 11.0 5.1 1.2 1 0 0 1 1 1 0 FlaG protein Glycophorin_A PF01102.18 NODE_66254_length_241_cov_1.927184_g58313_i0reverse_frame_2 - 3.1 8.1 5.4 14 6.0 3.1 2.0 1 1 1 2 2 2 0 Glycophorin A MORN PF02493.20 NODE_66251_length_241_cov_1.970874_g58310_i0forward_frame_2 - 7.8e-17 60.1 15.7 4.5e-07 29.4 0.3 4.2 4 0 0 4 4 4 4 MORN repeat Ion_trans PF00520.31 NODE_66248_length_241_cov_1.985437_g58307_i0forward_frame_3 - 3.2e-05 23.3 3.5 3.6e-05 23.1 3.5 1.0 1 0 0 1 1 1 1 Ion transport protein NPCC PF08058.11 NODE_66248_length_241_cov_1.985437_g58307_i0forward_frame_3 - 0.29 11.2 1.1 0.37 10.8 1.1 1.2 1 0 0 1 1 1 0 Nuclear pore complex component PBP-Tp47_c PF14888.6 NODE_66243_length_241_cov_2.024272_g58302_i0reverse_frame_3 - 0.037 14.0 0.1 0.044 13.7 0.1 1.0 1 0 0 1 1 1 0 Penicillin-binding protein Tp47 domain C DUF3759 PF12585.8 NODE_66238_length_241_cov_2.121359_g58297_i0reverse_frame_2 - 0.051 13.6 0.5 0.088 12.8 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3759) Tap-RNA_bind PF09162.10 NODE_66238_length_241_cov_2.121359_g58297_i0forward_frame_2 - 0.07 13.0 0.0 0.096 12.5 0.0 1.2 1 0 0 1 1 1 0 Tap, RNA-binding Ski_Sno PF02437.17 NODE_66237_length_241_cov_2.126214_g58296_i0reverse_frame_2 - 0.15 11.8 0.2 0.17 11.7 0.2 1.1 1 0 0 1 1 1 0 SKI/SNO/DAC family HECW_N PF16562.5 NODE_66237_length_241_cov_2.126214_g58296_i0forward_frame_3 - 0.0055 16.5 0.6 0.0073 16.1 0.6 1.2 1 0 0 1 1 1 1 N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2 HATPase_c PF02518.26 NODE_66236_length_241_cov_2.160194_g58295_i0forward_frame_3 - 0.00024 21.6 0.0 0.00036 21.0 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 NODE_66236_length_241_cov_2.160194_g58295_i0forward_frame_3 - 0.061 13.2 0.0 0.077 12.8 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ICMT PF04140.14 NODE_66232_length_241_cov_2.276699_g58291_i0reverse_frame_3 - 0.11 12.9 1.0 0.18 12.3 1.0 1.5 1 1 0 1 1 1 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF2500 PF10694.9 NODE_66230_length_241_cov_2.315534_g58289_i0forward_frame_3 - 0.034 14.6 1.1 0.043 14.3 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) DUF2371 PF10177.9 NODE_66224_length_241_cov_2.427184_g58283_i0reverse_frame_3 - 0.53 10.4 3.9 1 9.5 3.9 1.5 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) Aa_trans PF01490.18 NODE_66222_length_241_cov_2.446602_g58281_i0reverse_frame_2 - 2.9e-07 29.5 8.3 3.4e-07 29.3 8.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Mg296 PF09644.10 NODE_66219_length_241_cov_2.500000_g58278_i0forward_frame_3 - 0.078 13.1 1.2 0.095 12.8 1.2 1.2 1 0 0 1 1 1 0 Mg296 protein DivIVA PF05103.13 NODE_66217_length_241_cov_2.548544_g58276_i0reverse_frame_2 - 0.037 14.1 1.2 0.042 14.0 1.2 1.1 1 0 0 1 1 1 0 DivIVA protein SAS4 PF15460.6 NODE_66217_length_241_cov_2.548544_g58276_i0reverse_frame_2 - 0.075 13.1 2.3 0.094 12.8 2.3 1.2 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 Pex24p PF06398.11 NODE_66216_length_241_cov_2.592233_g58275_i0forward_frame_3 - 0.13 11.3 1.7 0.14 11.2 1.7 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Ilm1 PF10311.9 NODE_66216_length_241_cov_2.592233_g58275_i0forward_frame_3 - 0.14 11.8 1.0 0.18 11.4 0.9 1.3 1 1 0 1 1 1 0 Increased loss of mitochondrial DNA protein 1 Toxin_11 PF07473.11 NODE_66213_length_241_cov_2.650485_g58272_i0reverse_frame_3 - 3.2 7.9 8.6 0.43 10.7 4.5 1.6 2 0 0 2 2 2 0 Spasmodic peptide gm9a; conotoxin from Conus species HlyD_2 PF12700.7 NODE_66213_length_241_cov_2.650485_g58272_i0reverse_frame_2 - 0.32 9.7 1.1 0.37 9.5 1.1 1.1 1 0 0 1 1 1 0 HlyD family secretion protein Rad51 PF08423.11 NODE_66207_length_241_cov_2.742718_g58266_i0forward_frame_3 - 0.067 12.4 0.0 0.073 12.3 0.0 1.1 1 0 0 1 1 1 0 Rad51 MukE PF04288.13 NODE_66207_length_241_cov_2.742718_g58266_i0forward_frame_2 - 3.2e-11 42.6 0.2 3.9e-11 42.3 0.2 1.1 1 0 0 1 1 1 1 MukE-like family Fis1_TPR_C PF14853.6 NODE_66199_length_241_cov_2.961165_g58258_i0reverse_frame_2 - 0.02 14.9 0.1 0.027 14.5 0.1 1.3 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat GAT PF03127.14 NODE_66199_length_241_cov_2.961165_g58258_i0reverse_frame_2 - 0.1 12.9 0.1 0.18 12.2 0.1 1.4 1 0 0 1 1 1 0 GAT domain Cas9-BH PF16593.5 NODE_66198_length_241_cov_3.043689_g58257_i0reverse_frame_2 - 0.1 12.4 0.9 0.17 11.6 0.9 1.3 1 0 0 1 1 1 0 Bridge helix of CRISPR-associated endonuclease Cas9 DUF2207 PF09972.9 NODE_66196_length_241_cov_3.121359_g58255_i0reverse_frame_2 - 0.02 13.7 0.0 0.021 13.6 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5305 PF17231.2 NODE_66196_length_241_cov_3.121359_g58255_i0reverse_frame_2 - 0.022 14.1 0.0 0.025 14.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) SYS1 PF09801.9 NODE_66196_length_241_cov_3.121359_g58255_i0reverse_frame_2 - 0.057 13.6 0.0 0.058 13.5 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein S linking to the trans Golgi network Saf_2TM PF18303.1 NODE_66196_length_241_cov_3.121359_g58255_i0reverse_frame_2 - 0.083 12.5 0.0 0.092 12.3 0.0 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks301.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks301.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks301.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks301.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:03:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TraC PF07820.12 NODE_66195_length_241_cov_3.310680_g58254_i0forward_frame_2 - 0.0021 18.3 0.2 0.0033 17.7 0.1 1.4 1 1 0 1 1 1 1 TraC-like protein Pox_F17 PF04767.12 NODE_66189_length_241_cov_5.043689_g58248_i0forward_frame_2 - 0.053 14.0 0.1 0.066 13.7 0.1 1.1 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein PGA2 PF07543.12 NODE_66184_length_241_cov_31.174757_g58243_i0forward_frame_2 - 0.26 11.3 1.0 0.41 10.6 1.0 1.3 1 0 0 1 1 1 0 Protein trafficking PGA2 Yae1_N PF09811.9 NODE_66183_length_241_cov_31.567961_g58242_i0reverse_frame_2 - 0.062 13.0 5.1 0.23 11.2 5.1 2.0 1 1 0 1 1 1 0 Essential protein Yae1, N terminal HCV_NS2 PF01538.18 NODE_66179_length_241_cov_34.262136_g58238_i0forward_frame_3 - 0.14 11.8 0.3 0.15 11.7 0.3 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 TMEM223 PF14640.6 NODE_66178_length_241_cov_35.475728_g58237_i0reverse_frame_3 - 0.042 14.0 0.7 0.05 13.8 0.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 223 TMEM154 PF15102.6 NODE_66177_length_241_cov_40.199029_g58236_i0forward_frame_2 - 0.13 12.2 0.9 0.13 12.2 0.9 1.5 2 0 0 2 2 2 0 TMEM154 protein family TauD PF02668.16 NODE_66175_length_241_cov_47.495146_g58234_i0forward_frame_3 - 0.021 14.6 0.9 0.028 14.2 0.9 1.1 1 0 0 1 1 1 0 Taurine catabolism dioxygenase TauD, TfdA family DUF5008 PF16400.5 NODE_66174_length_241_cov_47.529126_g58233_i0reverse_frame_3 - 0.029 14.4 0.1 0.032 14.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5008) Pkinase PF00069.25 NODE_66174_length_241_cov_47.529126_g58233_i0reverse_frame_3 - 0.041 13.2 0.1 0.059 12.7 0.1 1.3 1 0 0 1 1 1 0 Protein kinase domain Whi5 PF08528.11 NODE_66169_length_241_cov_54.203883_g58228_i0forward_frame_3 - 9.4 6.0 7.6 9.8 5.9 1.1 2.2 2 0 0 2 2 2 0 Whi5 like zf_C2H2_10 PF18414.1 NODE_66162_length_241_cov_64.058252_g58221_i0reverse_frame_2 - 0.025 14.1 0.1 0.044 13.3 0.1 1.3 1 0 0 1 1 1 0 C2H2 type zinc-finger DUF4949 PF16307.5 NODE_66160_length_241_cov_66.373786_g58219_i0forward_frame_2 - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4949) DUF4305 PF14146.6 NODE_66159_length_241_cov_66.660194_g58218_i0reverse_frame_3 - 0.18 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4305) Vac_Fusion PF02346.16 NODE_66159_length_241_cov_66.660194_g58218_i0forward_frame_3 - 0.055 13.1 0.4 0.085 12.5 0.4 1.4 1 0 0 1 1 1 0 Chordopoxvirus multifunctional envelope protein A27 CaMBD PF02888.16 NODE_66158_length_241_cov_67.922330_g58217_i0forward_frame_3 - 0.026 14.7 0.0 0.031 14.5 0.0 1.2 1 0 0 1 1 1 0 Calmodulin binding domain Pep1_7 PF17232.2 NODE_66157_length_241_cov_72.699029_g58216_i0reverse_frame_2 - 1.6 9.2 10.9 6.1 7.4 10.8 1.9 1 1 0 1 1 1 0 Elicitor peptide 1-7 PGA2 PF07543.12 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 0.31 11.0 13.6 0.41 10.6 13.6 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 CCDC106 PF15794.5 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 0.33 10.6 15.7 0.39 10.4 15.7 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 YL1 PF05764.13 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 2.3 8.3 27.4 2.7 8.1 27.4 1.0 1 0 0 1 1 1 0 YL1 nuclear protein BUD22 PF09073.10 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 2.7 7.2 29.1 3 7.1 29.1 1.0 1 0 0 1 1 1 0 BUD22 Cwf_Cwc_15 PF04889.12 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 4.7 6.9 26.9 6.5 6.4 26.9 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein CDC45 PF02724.14 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 6.9 4.8 24.1 7.2 4.8 24.1 1.0 1 0 0 1 1 1 0 CDC45-like protein Pepdidase_M14_N PF18027.1 NODE_66155_length_241_cov_73.951456_g58214_i0reverse_frame_3 - 0.05 14.0 0.0 0.05 14.0 0.0 1.2 1 0 0 1 1 1 0 Cytosolic carboxypeptidase N-terminal domain DUF5415 PF17436.2 NODE_66150_length_241_cov_91.830097_g58209_i0forward_frame_2 - 0.048 13.7 0.0 0.059 13.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5415) DUF603 PF04645.12 NODE_66149_length_241_cov_97.053398_g58208_i0reverse_frame_3 - 0.0011 18.7 0.5 0.0012 18.6 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF603 Ank_4 PF13637.6 NODE_66138_length_241_cov_144.199029_g58197_i0reverse_frame_3 - 0.023 15.2 0.0 0.03 14.9 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 NODE_66138_length_241_cov_144.199029_g58197_i0reverse_frame_3 - 0.025 15.0 0.2 2.2 8.9 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat RyR PF02026.16 NODE_66134_length_241_cov_181.524272_g58193_i0forward_frame_2 - 0.016 15.4 0.6 0.02 15.0 0.6 1.1 1 0 0 1 1 1 0 RyR domain G-patch_2 PF12656.7 NODE_66132_length_241_cov_200.325243_g58191_i0reverse_frame_3 - 0.11 12.6 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 G-patch domain DUF4752 PF15944.5 NODE_66130_length_241_cov_309.033981_g58189_i0forward_frame_3 - 7.2 6.7 5.7 0.82 9.8 0.3 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4752) DUF4668 PF15701.5 NODE_66126_length_241_cov_603.504854_g58185_i0forward_frame_3 - 0.03 14.1 1.7 0.036 13.9 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) CFTR_R PF14396.6 NODE_66125_length_241_cov_770.174757_g58184_i0reverse_frame_2 - 0.015 14.8 0.1 0.018 14.6 0.1 1.0 1 0 0 1 1 1 0 Cystic fibrosis TM conductance regulator (CFTR), regulator domain DUF5542 PF17696.1 NODE_66123_length_242_cov_0.772947_g58182_i0reverse_frame_3 - 0.074 13.2 1.8 0.12 12.6 1.8 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5542) Adeno_E4_ORF3 PF06931.11 NODE_66122_length_242_cov_0.772947_g58181_i0forward_frame_3 - 0.069 13.4 0.1 0.082 13.1 0.1 1.1 1 0 0 1 1 1 0 Mastadenovirus E4 ORF3 protein HrpB1_HrpK PF09613.10 NODE_66119_length_242_cov_0.830918_g58178_i0reverse_frame_3 - 0.066 12.9 0.1 0.078 12.6 0.1 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB1_HrpK) RsmF_methylt_CI PF17126.5 NODE_66114_length_242_cov_1.014493_g58173_i0forward_frame_3 - 0.086 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 RsmF rRNA methyltransferase first C-terminal domain Cucumopine_C PF18631.1 NODE_66113_length_242_cov_1.014493_g58172_i0forward_frame_2 - 0.052 13.5 0.0 0.062 13.3 0.0 1.1 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain HemY_N PF07219.13 NODE_66110_length_242_cov_1.067633_g58169_i0reverse_frame_2 - 0.054 13.7 0.0 0.063 13.5 0.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus YaeQ PF07152.12 NODE_66103_length_242_cov_1.154589_g58162_i0forward_frame_3 - 0.11 12.1 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 YaeQ protein TEX13 PF15186.6 NODE_66102_length_242_cov_1.154589_g58161_i0reverse_frame_3 - 0.043 13.5 0.0 0.045 13.4 0.0 1.1 1 0 0 1 1 1 0 Testis-expressed sequence 13 protein family Peptidase_C5 PF00770.18 NODE_66102_length_242_cov_1.154589_g58161_i0reverse_frame_2 - 0.082 12.6 0.2 0.092 12.4 0.2 1.1 1 0 0 1 1 1 0 Adenovirus endoprotease L27_1 PF09058.10 NODE_66098_length_242_cov_1.159420_g58157_i0forward_frame_2 - 0.064 13.3 0.6 0.11 12.5 0.6 1.3 1 0 0 1 1 1 0 L27_1 NBD_C PF17042.5 NODE_66097_length_242_cov_1.159420_g58156_i0forward_frame_3 - 0.051 14.1 0.2 0.051 14.1 0.2 1.1 1 0 0 1 1 1 0 Nucleotide-binding C-terminal domain Spheroidin PF05541.12 NODE_66097_length_242_cov_1.159420_g58156_i0forward_frame_2 - 1.8 6.3 2.7 1.8 6.3 2.7 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein RhodobacterPufX PF11511.8 NODE_66096_length_242_cov_1.159420_g58155_i0reverse_frame_3 - 0.053 13.1 3.1 0.079 12.6 3.1 1.2 1 0 0 1 1 1 0 Intrinsic membrane protein PufX Amnionless PF14828.6 NODE_66096_length_242_cov_1.159420_g58155_i0reverse_frame_3 - 0.14 11.0 0.1 0.15 10.8 0.1 1.0 1 0 0 1 1 1 0 Amnionless NicO PF03824.16 NODE_66096_length_242_cov_1.159420_g58155_i0forward_frame_3 - 0.1 11.9 0.2 0.11 11.8 0.2 1.0 1 0 0 1 1 1 0 High-affinity nickel-transport protein SSP160 PF06933.11 NODE_66096_length_242_cov_1.159420_g58155_i0forward_frame_2 - 0.69 8.0 8.7 0.72 8.0 8.7 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 ELP6 PF09807.9 NODE_66093_length_242_cov_1.198068_g58152_i0reverse_frame_2 - 0.0087 15.5 0.2 0.0094 15.4 0.2 1.0 1 0 0 1 1 1 1 Elongation complex protein 6 Spo0A_C PF08769.11 NODE_66088_length_242_cov_1.318841_g58147_i0reverse_frame_3 - 0.048 13.7 0.1 0.06 13.4 0.1 1.2 1 0 0 1 1 1 0 Sporulation initiation factor Spo0A C terminal TPR_1 PF00515.28 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 8e-18 63.4 5.4 4.6e-11 42.1 0.4 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 2.7e-16 58.3 2.7 9.4e-09 34.7 0.1 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 7.1e-14 50.8 2.5 3e-09 36.3 0.1 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 1.2e-12 47.9 1.1 2.9e-12 46.7 1.1 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 6.4e-12 44.6 0.1 6.7e-07 28.9 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 2.3e-08 34.2 0.2 8.9e-05 22.9 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 8.4e-08 31.8 0.4 0.00034 20.4 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 1.3e-06 28.8 0.0 1.6e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 9e-06 26.1 0.0 0.0084 16.8 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 3.1e-05 23.6 4.3 0.0035 17.0 0.3 2.7 1 1 1 2 2 2 2 TPR repeat TPR_16 PF13432.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 5.2e-05 23.8 0.0 0.083 13.6 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.00011 22.3 1.9 1.3 9.6 0.1 3.2 3 1 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.0002 21.5 3.4 0.0059 16.8 3.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.00039 20.4 1.2 0.0069 16.4 0.1 2.2 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat SPO22 PF08631.10 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.0011 18.6 0.7 0.23 10.9 0.1 2.0 1 1 1 2 2 2 2 Meiosis protein SPO22/ZIP4 like SNAP PF14938.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.0029 17.1 1.0 0.0031 17.0 1.0 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP MIT PF04212.18 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.0032 17.5 2.5 0.15 12.2 0.2 2.1 2 0 0 2 2 2 1 MIT (microtubule interacting and transport) domain DUF3808 PF10300.9 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.0098 14.7 0.4 0.012 14.4 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3808) TPR_15 PF13429.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.022 14.0 0.0 0.026 13.8 0.0 1.0 1 0 0 1 1 1 0 Tetratricopeptide repeat Sel1 PF08238.12 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.069 13.9 1.0 1.5 9.6 0.1 2.2 2 0 0 2 2 2 0 Sel1 repeat TPR_3 PF07720.12 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.071 13.1 3.8 0.89 9.6 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat NSF PF02071.20 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 1.9 9.6 4.9 15 6.9 0.3 3.2 3 1 1 4 4 3 0 Aromatic-di-Alanine (AdAR) repeat R3H PF01424.22 NODE_66087_length_242_cov_1.323671_g58146_i0forward_frame_3 - 0.0054 16.7 0.3 0.12 12.4 0.2 2.1 2 0 0 2 2 2 2 R3H domain DUF684 PF05075.14 NODE_66085_length_242_cov_1.333333_g58144_i0reverse_frame_3 - 0.036 13.1 3.4 0.034 13.2 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF684) HR1 PF02185.16 NODE_66085_length_242_cov_1.333333_g58144_i0reverse_frame_3 - 0.051 13.7 0.1 0.066 13.3 0.1 1.2 1 0 0 1 1 1 0 Hr1 repeat TB PF00683.17 NODE_66083_length_242_cov_1.347826_g58142_i0forward_frame_3 - 0.027 14.2 0.7 0.042 13.6 0.7 1.2 1 0 0 1 1 1 0 TB domain WD40 PF00400.32 NODE_66081_length_242_cov_1.376812_g58140_i0reverse_frame_2 - 2.2e-05 25.1 0.8 0.0033 18.2 0.0 2.9 3 0 0 3 3 3 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_66081_length_242_cov_1.376812_g58140_i0reverse_frame_2 - 0.013 15.8 0.1 0.014 15.7 0.1 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain DUF2165 PF09933.9 NODE_66079_length_242_cov_1.463768_g58138_i0reverse_frame_3 - 0.099 12.7 0.2 0.13 12.3 0.2 1.1 1 0 0 1 1 1 0 Predicted small integral membrane protein (DUF2165) MASE5 PF17178.4 NODE_66077_length_242_cov_1.478261_g58136_i0reverse_frame_2 - 0.0079 16.0 0.3 0.009 15.9 0.3 1.0 1 0 0 1 1 1 1 Membrane-associated sensor DUF3974 PF13120.6 NODE_66074_length_242_cov_1.492754_g58133_i0forward_frame_3 - 0.044 13.9 0.6 0.052 13.6 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) Urb2 PF10441.9 NODE_66074_length_242_cov_1.492754_g58133_i0forward_frame_2 - 0.15 11.9 1.9 0.15 12.0 1.9 1.1 1 0 0 1 1 1 0 Urb2/Npa2 family LRR_3 PF07725.12 NODE_66074_length_242_cov_1.492754_g58133_i0forward_frame_2 - 2.9 7.9 5.2 1.6 8.7 0.5 2.5 2 0 0 2 2 2 0 Leucine Rich Repeat COX6A PF02046.15 NODE_66071_length_242_cov_1.507246_g58130_i0forward_frame_2 - 0.039 14.4 0.0 0.044 14.2 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa RP-C_C PF11800.8 NODE_66068_length_242_cov_1.516908_g58127_i0reverse_frame_3 - 0.13 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region Ppx-GppA PF02541.16 NODE_66065_length_242_cov_1.541063_g58124_i0reverse_frame_2 - 6.5e-08 32.3 0.0 6.8e-08 32.3 0.0 1.0 1 0 0 1 1 1 1 Ppx/GppA phosphatase family Corona_S2 PF01601.16 NODE_66064_length_242_cov_1.545894_g58123_i0reverse_frame_2 - 0.0045 15.5 0.1 0.0045 15.5 0.1 1.1 1 0 0 1 1 1 1 Coronavirus S2 glycoprotein EcoR124_C PF12008.8 NODE_66064_length_242_cov_1.545894_g58123_i0reverse_frame_2 - 0.021 14.5 0.1 0.026 14.2 0.1 1.0 1 0 0 1 1 1 0 Type I restriction and modification enzyme - subunit R C terminal DUF1192 PF06698.11 NODE_66064_length_242_cov_1.545894_g58123_i0reverse_frame_2 - 0.062 13.4 0.2 0.083 13.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) FecCD PF01032.18 NODE_66062_length_242_cov_1.550725_g58121_i0reverse_frame_2 - 1.2e-24 87.0 0.9 1.2e-24 86.9 0.9 1.0 1 0 0 1 1 1 1 FecCD transport family ChaC PF04752.12 NODE_66062_length_242_cov_1.550725_g58121_i0forward_frame_3 - 0.17 11.9 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 ChaC-like protein RecO_C PF02565.15 NODE_66058_length_242_cov_1.613527_g58117_i0reverse_frame_3 - 0.00073 19.4 2.5 0.048 13.5 0.3 2.0 1 1 1 2 2 2 2 Recombination protein O C terminal YebO PF13974.6 NODE_66058_length_242_cov_1.613527_g58117_i0reverse_frame_2 - 0.0043 17.1 1.1 0.0057 16.7 1.1 1.2 1 0 0 1 1 1 1 YebO-like protein DAP10 PF07213.11 NODE_66058_length_242_cov_1.613527_g58117_i0forward_frame_3 - 0.056 13.4 3.3 0.07 13.1 3.3 1.2 1 0 0 1 1 1 0 DAP10 membrane protein Keratin_B2_2 PF13885.6 NODE_66058_length_242_cov_1.613527_g58117_i0forward_frame_3 - 1.1 9.2 21.2 0.077 13.0 14.3 2.0 1 1 1 2 2 2 0 Keratin, high sulfur B2 protein DJ-1_PfpI PF01965.24 NODE_66055_length_242_cov_1.676329_g58114_i0forward_frame_3 - 0.19 11.5 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 DJ-1/PfpI family Ploopntkinase2 PF18747.1 NODE_66054_length_242_cov_1.690821_g58113_i0forward_frame_2 - 0.082 12.2 0.1 0.082 12.2 0.1 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase2 SMC_N PF02463.19 NODE_66051_length_242_cov_1.705314_g58110_i0reverse_frame_2 - 0.0015 18.0 0.1 0.0017 17.9 0.1 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain RabGAP-TBC PF00566.18 NODE_66050_length_242_cov_1.724638_g58109_i0forward_frame_3 - 3.2e-08 33.5 0.3 3.2e-08 33.5 0.3 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain FixS PF03597.15 NODE_66049_length_242_cov_1.729469_g58108_i0forward_frame_3 - 0.5 10.1 1.9 0.73 9.6 1.9 1.2 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type Lir1 PF07207.11 NODE_66048_length_242_cov_1.739130_g58107_i0forward_frame_3 - 0.078 13.2 0.0 0.086 13.1 0.0 1.3 1 0 0 1 1 1 0 Light regulated protein Lir1 DNA_photolyase PF00875.18 NODE_66046_length_242_cov_1.787440_g58105_i0reverse_frame_2 - 1.2e-09 38.4 0.3 1.6e-09 38.0 0.3 1.2 1 0 0 1 1 1 1 DNA photolyase Ribosomal_S27 PF01599.19 NODE_66044_length_242_cov_1.821256_g58103_i0forward_frame_3 - 0.052 13.7 0.5 0.082 13.1 0.5 1.3 1 0 0 1 1 1 0 Ribosomal protein S27a Mak10 PF04112.13 NODE_66043_length_242_cov_1.830918_g58102_i0reverse_frame_3 - 0.15 11.5 0.7 0.17 11.4 0.7 1.0 1 0 0 1 1 1 0 Mak10 subunit, NatC N(alpha)-terminal acetyltransferase IL3Ra_N PF18611.1 NODE_66041_length_242_cov_1.850242_g58100_i0forward_frame_3 - 0.13 12.3 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain NACHT_sigma PF17106.5 NODE_66040_length_242_cov_1.864734_g58099_i0forward_frame_3 - 0.11 12.7 0.4 0.18 12.0 0.4 1.2 1 0 0 1 1 1 0 Sigma domain on NACHT-NTPases SBP_bac_8 PF13416.6 NODE_66037_length_242_cov_1.922705_g58096_i0forward_frame_3 - 2.3e-08 34.2 0.0 2.5e-08 34.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 NODE_66037_length_242_cov_1.922705_g58096_i0forward_frame_3 - 3.6e-08 33.7 0.1 3.8e-08 33.6 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein LPP PF04728.13 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 8.1e-25 87.0 9.9 9.6e-25 86.7 9.9 1.1 1 0 0 1 1 1 1 Lipoprotein leucine-zipper JIP_LZII PF16471.5 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.00013 22.1 0.2 0.0012 19.0 0.1 1.9 1 1 1 2 2 2 1 JNK-interacting protein leucine zipper II Alanine_zipper PF11839.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.00017 21.9 9.4 0.0003 21.1 7.8 2.0 1 1 1 2 2 2 1 Alanine-zipper, major outer membrane lipoprotein EzrA PF06160.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0011 17.3 0.6 0.0012 17.2 0.6 1.0 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA TMF_DNA_bd PF12329.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0021 18.0 0.3 0.0026 17.7 0.3 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding DUF4763 PF15960.5 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0024 17.2 0.4 0.0026 17.1 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) DUF1664 PF07889.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0028 17.7 0.5 0.0033 17.4 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF948 PF06103.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0044 17.2 0.9 0.0054 17.0 0.9 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) ADIP PF11559.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0049 17.0 1.8 0.0065 16.6 1.8 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding YscO PF07321.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.005 16.8 0.7 0.0056 16.6 0.7 1.0 1 0 0 1 1 1 1 Type III secretion protein YscO Tropomyosin_1 PF12718.7 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0052 17.0 0.5 0.0063 16.7 0.5 1.1 1 0 0 1 1 1 1 Tropomyosin like ZapB PF06005.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0054 17.1 0.2 0.0067 16.8 0.2 1.1 1 0 0 1 1 1 1 Cell division protein ZapB Cluap1 PF10234.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0057 16.1 0.9 0.0067 15.8 0.9 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 TPR_MLP1_2 PF07926.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0061 16.6 0.9 0.0073 16.4 0.9 1.2 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein CLZ PF16526.5 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0072 16.7 0.5 0.36 11.2 0.1 2.0 1 1 1 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels EspB_PE PF18625.1 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.012 16.0 1.0 0.016 15.7 1.0 1.2 1 0 0 1 1 1 0 ESX-1 secreted protein B PE domain NPV_P10 PF05531.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.012 16.0 2.0 0.018 15.5 2.0 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF16 PF01519.16 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.013 15.9 0.9 0.022 15.2 0.9 1.3 1 1 0 1 1 1 0 Protein of unknown function DUF16 TraF_2 PF13729.6 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.016 14.6 0.7 0.018 14.4 0.7 1.0 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein DivIC PF04977.15 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.017 14.9 0.6 0.024 14.4 0.6 1.3 1 0 0 1 1 1 0 Septum formation initiator COG6 PF06419.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.017 13.3 1.0 0.02 13.1 1.0 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 XhlA PF10779.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.023 14.9 2.0 0.13 12.4 2.0 1.9 1 1 0 1 1 1 0 Haemolysin XhlA Jnk-SapK_ap_N PF09744.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.027 14.7 0.4 0.031 14.5 0.4 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Fusion_gly PF00523.18 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.031 12.6 0.2 0.033 12.4 0.2 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0 GrpE PF01025.19 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.032 13.9 0.9 0.037 13.7 0.9 1.1 1 0 0 1 1 1 0 GrpE Atg14 PF10186.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.036 13.2 0.5 0.041 13.0 0.5 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4407 PF14362.6 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.037 13.4 0.6 0.042 13.2 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Med4 PF10018.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.037 13.7 0.4 0.044 13.5 0.4 1.0 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 COG7 PF10191.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.039 12.2 0.4 0.041 12.1 0.4 1.0 1 0 0 1 1 1 0 Golgi complex component 7 (COG7) DUF3584 PF12128.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.039 11.5 1.7 0.044 11.3 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) TolA_bind_tri PF16331.5 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.039 14.0 0.4 0.062 13.4 0.4 1.4 1 0 0 1 1 1 0 TolA binding protein trimerisation Spc7 PF08317.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.042 12.7 0.2 0.043 12.7 0.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein COG2 PF06148.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.048 13.7 0.2 0.057 13.5 0.2 1.1 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DLP_helical PF18709.1 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.049 12.8 0.8 0.055 12.7 0.8 1.0 1 0 0 1 1 1 0 Dynamin-like helical domain FlaC_arch PF05377.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.052 13.9 0.2 0.075 13.4 0.2 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF3138 PF11336.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.061 11.9 0.6 0.064 11.9 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) MbeD_MobD PF04899.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.064 13.4 0.5 0.12 12.5 0.3 1.6 1 1 0 1 1 1 0 MbeD/MobD like CENP-F_leu_zip PF10473.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.066 13.2 0.1 0.081 12.9 0.1 1.2 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AKNA PF12443.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.076 13.7 0.0 0.092 13.4 0.0 1.2 1 0 0 1 1 1 0 AT-hook-containing transcription factor SlyX PF04102.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.14 12.8 1.4 0.21 12.2 1.4 1.3 1 1 0 1 1 1 0 SlyX CoA_binding_3 PF13727.6 NODE_66031_length_242_cov_2.096618_g58090_i0reverse_frame_3 - 0.013 15.5 0.4 0.014 15.4 0.4 1.0 1 0 0 1 1 1 0 CoA-binding domain hnRNP_Q_AcD PF18360.1 NODE_66026_length_242_cov_2.202899_g58085_i0reverse_frame_2 - 0.048 13.6 0.3 0.29 11.1 0.0 2.0 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain DUF2613 PF11021.8 NODE_66025_length_242_cov_2.217391_g58084_i0forward_frame_3 - 0.13 12.4 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) MPDZ_u10 PF16667.5 NODE_66022_length_242_cov_2.270531_g58081_i0reverse_frame_3 - 9 7.3 9.3 7.2 7.6 3.0 2.1 1 1 1 2 2 2 0 Unstructured region 10 on multiple PDZ protein GnRH PF00446.17 NODE_66017_length_242_cov_2.531401_g58076_i0forward_frame_3 - 0.34 11.4 0.9 0.34 11.4 0.9 2.2 3 0 0 3 3 3 0 Gonadotropin-releasing hormone Kelch_1 PF01344.25 NODE_66013_length_242_cov_2.632850_g58072_i0reverse_frame_3 - 0.19 11.3 0.0 2 8.1 0.0 2.1 2 0 0 2 2 2 0 Kelch motif QLQ PF08880.11 NODE_66013_length_242_cov_2.632850_g58072_i0forward_frame_3 - 0.052 13.3 0.2 0.078 12.7 0.2 1.3 1 0 0 1 1 1 0 QLQ VraX PF17412.2 NODE_66012_length_242_cov_2.734300_g58071_i0forward_frame_2 - 0.023 14.3 0.1 0.043 13.5 0.1 1.5 1 1 0 1 1 1 0 Family of unknown function Histone PF00125.24 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 2.2e-07 31.3 0.0 2.9e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 1.6e-06 28.1 0.0 1.8e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 0.00032 21.0 0.0 0.00039 20.8 0.0 1.2 1 0 0 1 1 1 1 CENP-S protein Bromo_TP PF07524.13 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 0.0048 16.9 0.1 0.008 16.2 0.1 1.4 1 1 0 1 1 1 1 Bromodomain associated CBFD_NFYB_HMF PF00808.23 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 0.016 15.5 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Claudin_3 PF06653.11 NODE_66008_length_242_cov_2.869565_g58067_i0forward_frame_2 - 0.00021 21.3 2.0 0.00021 21.3 2.0 1.1 1 0 0 1 1 1 1 Tight junction protein, Claudin-like ABC_tran PF00005.27 NODE_66007_length_242_cov_2.888889_g58066_i0forward_frame_3 - 0.011 16.3 0.0 0.012 16.1 0.0 1.0 1 0 0 1 1 1 0 ABC transporter GSH_synthase PF03199.15 NODE_66004_length_242_cov_3.086957_g58063_i0forward_frame_2 - 7.2e-16 58.5 0.0 9.8e-16 58.1 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase GSH_synth_ATP PF03917.17 NODE_66004_length_242_cov_3.086957_g58063_i0forward_frame_2 - 0.013 14.3 0.0 0.013 14.3 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic glutathione synthase, ATP binding domain CBM_21 PF03370.13 NODE_65998_length_242_cov_3.550725_g58057_i0reverse_frame_2 - 0.03 14.5 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate/starch-binding module (family 21) PhoLip_ATPase_C PF16212.5 NODE_65998_length_242_cov_3.550725_g58057_i0forward_frame_3 - 1.5e-08 34.7 4.8 1.6e-08 34.7 4.8 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal ATP-synt_8 PF00895.20 NODE_65998_length_242_cov_3.550725_g58057_i0forward_frame_3 - 0.059 13.8 4.0 3.3 8.2 0.5 2.1 1 1 1 2 2 2 0 ATP synthase protein 8 Creatininase PF02633.14 NODE_65997_length_242_cov_3.574879_g58056_i0forward_frame_2 - 0.12 11.9 0.0 0.12 11.9 0.0 1.0 1 0 0 1 1 1 0 Creatinine amidohydrolase Fer4_15 PF13459.6 NODE_65996_length_242_cov_3.642512_g58055_i0forward_frame_3 - 0.054 14.2 0.0 0.08 13.7 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain DivIC PF04977.15 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.00051 19.7 1.3 0.00071 19.3 1.3 1.3 1 0 0 1 1 1 1 Septum formation initiator ZapB PF06005.12 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.0028 18.0 1.5 0.0045 17.4 1.5 1.2 1 0 0 1 1 1 1 Cell division protein ZapB ADIP PF11559.8 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.0057 16.8 1.5 0.0063 16.6 1.5 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding APG6_N PF17675.1 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.014 16.0 1.1 0.016 15.8 1.1 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region WD40_alt PF14077.6 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.026 14.4 0.6 0.082 12.8 0.6 1.9 1 0 0 1 1 1 0 Alternative WD40 repeat motif bZIP_1 PF00170.21 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.12 12.5 3.6 0.23 11.6 3.6 1.5 1 0 0 1 1 1 0 bZIP transcription factor bZIP_2 PF07716.15 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.62 10.2 5.7 0.94 9.6 0.5 2.6 2 1 1 3 3 3 0 Basic region leucine zipper CLN6 PF15156.6 NODE_65991_length_242_cov_10.077295_g58050_i0forward_frame_3 - 0.038 13.3 0.1 0.044 13.1 0.1 1.0 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 6 DUF5530 PF17670.1 NODE_65989_length_242_cov_14.367150_g58048_i0forward_frame_3 - 0.011 15.5 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5530) Fumarate_red_D PF02313.17 NODE_65989_length_242_cov_14.367150_g58048_i0forward_frame_2 - 0.16 12.1 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit D TNFR_16_TM PF18422.1 NODE_65987_length_242_cov_15.434783_g58046_i0forward_frame_3 - 0.079 12.9 0.3 0.14 12.2 0.3 1.4 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain Pkinase PF00069.25 NODE_65983_length_242_cov_32.975845_g58042_i0reverse_frame_3 - 6.1e-05 22.5 0.0 6.1e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF5445 PF17520.2 NODE_65982_length_242_cov_33.367150_g58041_i0forward_frame_3 - 0.00014 21.7 0.1 0.00021 21.1 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5445) TDP43_N PF18694.1 NODE_65974_length_242_cov_46.913043_g58033_i0forward_frame_3 - 0.19 11.6 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Transactive response DNA-binding protein N-terminal domain DUF2790 PF10976.8 NODE_65972_length_242_cov_47.507246_g58031_i0reverse_frame_3 - 0.054 13.5 0.1 0.071 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2790) CrgA PF06781.12 NODE_65968_length_242_cov_52.830918_g58027_i0forward_frame_3 - 0.17 11.9 0.1 0.3 11.2 0.0 1.5 1 1 1 2 2 2 0 Cell division protein CrgA Exc PF07825.11 NODE_65965_length_242_cov_57.207729_g58024_i0reverse_frame_2 - 0.068 13.2 0.1 0.13 12.3 0.0 1.5 1 1 1 2 2 2 0 Excisionase-like protein Tsc35 PF15079.6 NODE_65964_length_242_cov_59.164251_g58023_i0reverse_frame_2 - 0.0068 16.0 0.7 0.0088 15.6 0.7 1.1 1 0 0 1 1 1 1 Testis-specific protein 35 Chromo PF00385.24 NODE_65962_length_242_cov_60.420290_g58021_i0forward_frame_3 - 2e-06 27.6 0.2 2e-06 27.6 0.2 1.7 2 0 0 2 2 2 1 Chromo (CHRromatin Organisation MOdifier) domain Adhesin_E PF16747.5 NODE_65959_length_242_cov_61.512077_g58018_i0reverse_frame_2 - 0.044 13.8 0.2 0.053 13.6 0.2 1.1 1 0 0 1 1 1 0 Surface-adhesin protein E SCIFF PF13165.6 NODE_65957_length_242_cov_65.019324_g58016_i0forward_frame_2 - 0.0047 16.8 6.2 0.0066 16.4 6.2 1.2 1 0 0 1 1 1 1 Six-cysteine peptide SCIFF Glyco_trans_1_3 PF13528.6 NODE_65956_length_242_cov_66.937198_g58015_i0forward_frame_2 - 0.093 12.0 0.0 0.093 12.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 1 DUF997 PF06196.12 NODE_65953_length_242_cov_69.396135_g58012_i0reverse_frame_2 - 0.097 12.7 3.2 0.12 12.3 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF997) DUF5452 PF17533.2 NODE_65951_length_242_cov_72.173913_g58010_i0forward_frame_2 - 0.067 13.3 0.0 0.077 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5452) DUF3948 PF13134.6 NODE_65951_length_242_cov_72.173913_g58010_i0forward_frame_2 - 2.2 8.1 3.8 5.6 6.8 3.8 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3948) KIAA1430 PF13879.6 NODE_65950_length_242_cov_72.975845_g58009_i0forward_frame_3 - 0.1 13.4 7.2 0.13 13.0 7.2 1.3 1 0 0 1 1 1 0 KIAA1430 homologue EMC3_TMCO1 PF01956.16 NODE_65950_length_242_cov_72.975845_g58009_i0forward_frame_3 - 6.7 6.4 8.4 3.6 7.3 6.9 1.3 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like TB2_DP1_HVA22 PF03134.19 NODE_65949_length_242_cov_77.801932_g58008_i0forward_frame_2 - 0.56 10.2 6.0 0.079 12.9 1.7 1.7 1 1 1 2 2 2 0 TB2/DP1, HVA22 family DUF281 PF03436.13 NODE_65948_length_242_cov_80.053140_g58007_i0reverse_frame_2 - 0.058 13.8 2.4 0.1 13.0 2.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF281) MORN PF02493.20 NODE_65944_length_242_cov_87.797101_g58003_i0forward_frame_2 - 4.5e-10 38.8 10.7 0.0002 21.0 1.6 3.2 3 0 0 3 3 3 3 MORN repeat Cys_rich_CPCC PF14206.6 NODE_65938_length_242_cov_105.903382_g57997_i0reverse_frame_3 - 0.069 13.0 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Cysteine-rich CPCC INSC_LBD PF16748.5 NODE_65938_length_242_cov_105.903382_g57997_i0forward_frame_3 - 0.0016 17.8 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 Inscuteable LGN-binding domain CPW_WPC PF09717.10 NODE_65937_length_242_cov_117.473430_g57996_i0reverse_frame_3 - 0.0036 18.3 0.1 0.0044 18.0 0.1 1.1 1 0 0 1 1 1 1 Plasmodium falciparum domain of unknown function (CPW_WPC) GCK PF07802.11 NODE_65936_length_242_cov_127.975845_g57995_i0reverse_frame_2 - 0.12 12.8 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 GCK domain SVM_signal PF12113.8 NODE_65936_length_242_cov_127.975845_g57995_i0forward_frame_2 - 0.12 12.3 0.9 0.12 12.3 0.9 1.9 2 1 0 2 2 2 0 SVM protein signal sequence XPB_DRD PF18458.1 NODE_65930_length_242_cov_150.053140_g57989_i0reverse_frame_3 - 0.037 13.9 0.1 0.086 12.7 0.1 1.7 1 1 1 2 2 2 0 Xeroderma pigmentosum group B helicase damage recognition domain ERGIC_N PF13850.6 NODE_65928_length_242_cov_198.202899_g57987_i0reverse_frame_3 - 0.0047 17.2 0.3 0.0056 17.0 0.3 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) LapA_dom PF06305.11 NODE_65924_length_242_cov_227.705314_g57983_i0reverse_frame_3 - 0.71 9.7 4.4 12 5.8 0.7 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain TRIC PF05197.13 NODE_65921_length_242_cov_252.705314_g57980_i0reverse_frame_3 - 0.096 12.3 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 TRIC channel Pro_3_hydrox_C PF05373.11 NODE_65917_length_242_cov_536.188406_g57976_i0forward_frame_3 - 0.016 15.3 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 L-proline 3-hydroxylase, C-terminal DUF898 PF05987.13 NODE_65913_length_242_cov_7082.000000_g57972_i0reverse_frame_2 - 0.045 12.8 0.3 0.046 12.8 0.3 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF3482 PF11981.8 NODE_65912_length_242_cov_26989.217391_g57971_i0forward_frame_3 - 0.052 12.9 8.7 0.064 12.6 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) IpaB_EvcA PF03278.13 NODE_65911_length_243_cov_0.865385_g57970_i0reverse_frame_3 - 0.17 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 IpaB/EvcA family Malate_DH PF12434.8 NODE_65911_length_243_cov_0.865385_g57970_i0reverse_frame_2 - 0.42 10.7 1.5 0.47 10.5 0.4 1.6 2 0 0 2 2 2 0 Malate dehydrogenase enzyme Glutaminase PF04960.15 NODE_65908_length_243_cov_0.956731_g57967_i0forward_frame_2 - 8.4e-20 71.1 0.1 9e-20 71.0 0.1 1.0 1 0 0 1 1 1 1 Glutaminase He_PIG PF05345.12 NODE_65905_length_243_cov_1.052885_g57964_i0reverse_frame_3 - 0.0067 16.6 0.4 0.016 15.4 0.4 1.7 1 1 0 1 1 1 1 Putative Ig domain zf-met PF12874.7 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 8.6e-05 22.8 4.3 0.025 15.0 0.8 2.4 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.00074 20.2 14.9 0.0024 18.5 2.9 3.0 3 0 0 3 3 3 2 C2H2-type zinc finger zf-Di19 PF05605.12 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.00086 19.5 9.5 0.0018 18.5 7.9 2.0 2 0 0 2 2 2 1 Drought induced 19 protein (Di19), zinc-binding zf-H2C2_2 PF13465.6 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.005 17.2 7.8 0.13 12.7 1.2 2.6 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2_jaz PF12171.8 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.011 16.0 2.5 0.016 15.5 0.2 2.1 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.022 15.2 3.2 0.022 15.2 3.2 2.7 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_2 PF12756.7 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.26 11.6 5.9 1.3 9.4 1.0 2.1 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) Terminase_GpA PF05876.12 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.59 8.6 4.0 0.65 8.5 4.0 1.0 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) Rad50_zn_hook PF04423.14 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 2.6 7.9 6.9 2 8.3 0.5 2.2 2 0 0 2 2 2 0 Rad50 zinc hook motif DUF2960 PF11173.8 NODE_65903_length_243_cov_1.091346_g57962_i0forward_frame_3 - 0.033 14.6 3.7 3.6 8.1 0.1 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF2960) Lamprin PF06403.11 NODE_65903_length_243_cov_1.091346_g57962_i0forward_frame_2 - 2.3 8.2 15.9 0.47 10.4 7.7 2.2 1 1 1 2 2 2 0 Lamprin RuvB_C PF05491.13 NODE_65894_length_243_cov_1.153846_g57953_i0forward_frame_3 - 0.037 13.9 0.1 0.05 13.5 0.1 1.2 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain DUF3723 PF12520.8 NODE_65894_length_243_cov_1.153846_g57953_i0forward_frame_3 - 0.058 12.1 0.1 0.067 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3723) p31comet PF06581.12 NODE_65894_length_243_cov_1.153846_g57953_i0forward_frame_2 - 0.079 12.1 0.0 0.079 12.1 0.0 1.0 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding zf-C3HC4_3 PF13920.6 NODE_65892_length_243_cov_1.153846_g57951_i0forward_frame_2 - 0.023 14.5 0.4 0.023 14.5 0.4 1.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) cpYpsA PF12694.7 NODE_65892_length_243_cov_1.153846_g57951_i0forward_frame_2 - 0.15 11.9 0.0 0.17 11.7 0.0 1.0 1 0 0 1 1 1 0 Circularly permutated YpsA SLOG family GATA PF00320.27 NODE_65889_length_243_cov_1.221154_g57948_i0reverse_frame_3 - 0.059 13.0 1.5 0.068 12.8 0.3 1.7 2 0 0 2 2 2 0 GATA zinc finger UBM PF14377.6 NODE_65887_length_243_cov_1.288462_g57946_i0reverse_frame_2 - 0.099 12.1 0.2 0.16 11.5 0.2 1.3 1 0 0 1 1 1 0 Ubiquitin binding region PAN_1 PF00024.26 NODE_65884_length_243_cov_1.341346_g57943_i0forward_frame_3 - 0.0067 16.4 0.7 0.012 15.6 0.5 1.5 1 1 1 2 2 2 1 PAN domain DUF565 PF04483.12 NODE_65882_length_243_cov_1.346154_g57941_i0forward_frame_2 - 4.5 7.9 5.9 1.2 9.8 0.3 2.5 2 1 0 3 3 3 0 Protein of unknown function (DUF565) DUF4657 PF15552.6 NODE_65880_length_243_cov_1.423077_g57939_i0forward_frame_3 - 0.011 15.3 0.3 0.035 13.7 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4657) AvrPtoB_bdg PF16847.5 NODE_65880_length_243_cov_1.423077_g57939_i0forward_frame_3 - 0.12 12.8 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Avirulence AvrPtoB, BAK1-binding domain Clusterin PF01093.17 NODE_65880_length_243_cov_1.423077_g57939_i0forward_frame_2 - 0.11 11.6 0.7 0.1 11.6 0.7 1.1 1 0 0 1 1 1 0 Clusterin MreB_Mbl PF06723.13 NODE_65879_length_243_cov_1.447115_g57938_i0forward_frame_2 - 0.064 12.1 0.0 0.066 12.0 0.0 1.0 1 0 0 1 1 1 0 MreB/Mbl protein NKAIN PF05640.14 NODE_65878_length_243_cov_1.471154_g57937_i0reverse_frame_3 - 0.088 12.0 0.1 0.09 12.0 0.1 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks302.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks302.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks302.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks302.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3810 PF12725.7 NODE_65874_length_243_cov_1.485577_g57933_i0forward_frame_3 - 1.1 8.6 3.7 0.98 8.7 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Croc_4 PF17691.1 NODE_65871_length_243_cov_1.495192_g57930_i0forward_frame_3 - 0.021 14.9 0.6 0.027 14.5 0.6 1.1 1 0 0 1 1 1 0 Contingent replication of cDNA 4 DIM1 PF02966.16 NODE_65867_length_243_cov_1.533654_g57926_i0forward_frame_3 - 0.071 12.9 0.0 0.079 12.7 0.0 1.1 1 0 0 1 1 1 0 Mitosis protein DIM1 MukB PF04310.12 NODE_65863_length_243_cov_1.548077_g57922_i0forward_frame_2 - 7e-34 117.6 0.0 7.6e-34 117.5 0.0 1.0 1 0 0 1 1 1 1 MukB N-terminal KIX PF02172.16 NODE_65863_length_243_cov_1.548077_g57922_i0forward_frame_2 - 0.094 13.0 0.2 0.91 9.8 0.0 2.0 1 1 1 2 2 2 0 KIX domain Ku_N PF03731.15 NODE_65862_length_243_cov_1.557692_g57921_i0forward_frame_2 - 0.078 12.7 0.0 0.078 12.7 0.0 1.1 1 0 0 1 1 1 0 Ku70/Ku80 N-terminal alpha/beta domain DUF412 PF04217.13 NODE_65861_length_243_cov_1.572115_g57920_i0reverse_frame_2 - 0.044 13.7 0.1 0.051 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF412 AZUL PF16558.5 NODE_65860_length_243_cov_1.572115_g57919_i0forward_frame_2 - 2.7 8.3 8.5 6.6 7.1 8.5 1.8 1 1 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A fn1 PF00039.18 NODE_65857_length_243_cov_1.615385_g57916_i0reverse_frame_3 - 0.028 14.6 2.9 0.039 14.1 0.4 2.0 1 1 1 2 2 2 0 Fibronectin type I domain SfsA_N PF17746.1 NODE_65850_length_243_cov_1.682692_g57909_i0reverse_frame_2 - 0.077 13.2 0.0 0.094 12.9 0.0 1.2 1 0 0 1 1 1 0 SfsA N-terminal OB domain OrfB_Zn_ribbon PF07282.11 NODE_65848_length_243_cov_1.721154_g57907_i0forward_frame_3 - 0.05 13.5 1.3 0.074 13.0 1.3 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF5466 PF17554.2 NODE_65845_length_243_cov_1.754808_g57904_i0forward_frame_2 - 0.1 12.8 3.4 0.61 10.3 3.4 2.1 1 1 0 1 1 1 0 Family of unknown function (DUF5466) CBM49 PF09478.10 NODE_65843_length_243_cov_1.769231_g57902_i0forward_frame_3 - 0.045 14.1 0.0 0.049 13.9 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate binding domain CBM49 NS3_envE PF02723.14 NODE_65843_length_243_cov_1.769231_g57902_i0forward_frame_3 - 0.18 11.9 11.7 0.25 11.5 11.3 1.5 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E TAT_signal PF10518.9 NODE_65837_length_243_cov_1.836538_g57896_i0forward_frame_2 - 0.0038 17.0 1.0 0.0065 16.3 1.0 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Tnp_DNA_bind PF14706.6 NODE_65836_length_243_cov_1.841346_g57895_i0reverse_frame_3 - 0.06 13.2 0.0 0.082 12.8 0.0 1.2 1 0 0 1 1 1 0 Transposase DNA-binding FUSC PF04632.12 NODE_65830_length_243_cov_1.918269_g57889_i0reverse_frame_2 - 2.2e-12 46.4 2.1 2.2e-12 46.3 2.1 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family Shisa PF13908.6 NODE_65829_length_243_cov_1.923077_g57888_i0reverse_frame_3 - 0.59 10.3 4.0 0.65 10.2 4.0 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Hint_2 PF13403.6 NODE_65828_length_243_cov_1.937500_g57887_i0forward_frame_3 - 0.0066 16.7 0.0 0.0073 16.6 0.0 1.2 1 0 0 1 1 1 1 Hint domain DUF4342 PF14242.6 NODE_65818_length_243_cov_2.033654_g57877_i0reverse_frame_3 - 0.098 12.7 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) DUF2457 PF10446.9 NODE_65817_length_243_cov_2.033654_g57876_i0reverse_frame_3 - 6.2 5.8 7.8 7 5.7 7.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Methyltransf_22 PF13383.6 NODE_65815_length_243_cov_2.072115_g57874_i0reverse_frame_3 - 0.069 12.7 0.0 0.086 12.4 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Cpn60_TCP1 PF00118.24 NODE_65812_length_243_cov_2.105769_g57871_i0reverse_frame_3 - 0.072 11.7 0.1 0.071 11.7 0.1 1.0 1 0 0 1 1 1 0 TCP-1/cpn60 chaperonin family XAF1_C PF18608.1 NODE_65812_length_243_cov_2.105769_g57871_i0reverse_frame_2 - 0.11 12.1 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain DUF4460 PF14687.6 NODE_65809_length_243_cov_2.120192_g57868_i0reverse_frame_2 - 0.028 14.5 1.5 0.032 14.3 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) Anoct_dimer PF16178.5 NODE_65809_length_243_cov_2.120192_g57868_i0reverse_frame_2 - 0.035 13.8 0.7 0.037 13.7 0.7 1.1 1 0 0 1 1 1 0 Dimerisation domain of Ca+-activated chloride-channel, anoctamin Peptidase_S11 PF00768.20 NODE_65807_length_243_cov_2.211538_g57866_i0forward_frame_2 - 0.23 10.9 0.0 0.27 10.6 0.0 1.0 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase Melibiase_2 PF16499.5 NODE_65802_length_243_cov_2.293269_g57861_i0forward_frame_2 - 0.086 12.0 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 Alpha galactosidase A MORN PF02493.20 NODE_65801_length_243_cov_2.442308_g57860_i0forward_frame_2 - 0.00056 19.7 9.7 0.00077 19.2 3.0 3.4 4 0 0 4 4 4 1 MORN repeat Tudor_2 PF18104.1 NODE_65801_length_243_cov_2.442308_g57860_i0forward_frame_2 - 0.0074 15.9 0.1 0.016 14.8 0.1 1.6 1 0 0 1 1 1 1 Jumonji domain-containing protein 2A Tudor domain BALF1 PF06861.11 NODE_65800_length_243_cov_2.528846_g57859_i0reverse_frame_3 - 0.11 12.1 0.2 0.13 11.9 0.2 1.0 1 0 0 1 1 1 0 BALF1 protein CTV_P13 PF06922.11 NODE_65799_length_243_cov_2.572115_g57858_i0reverse_frame_2 - 0.13 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P13 protein Integrin_b_cyt PF08725.11 NODE_65797_length_243_cov_2.870192_g57856_i0reverse_frame_2 - 0.042 13.6 1.1 0.1 12.3 0.3 1.9 2 0 0 2 2 2 0 Integrin beta cytoplasmic domain DUF4783 PF16022.5 NODE_65795_length_243_cov_2.975962_g57854_i0forward_frame_2 - 0.0044 17.1 0.0 0.0054 16.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4783) Pentapeptide_4 PF13599.6 NODE_65792_length_243_cov_3.466346_g57851_i0forward_frame_3 - 0.039 14.1 0.1 0.044 13.9 0.1 1.1 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) GST_N PF02798.20 NODE_65792_length_243_cov_3.466346_g57851_i0forward_frame_2 - 2.5e-08 34.2 0.0 3e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 NODE_65792_length_243_cov_3.466346_g57851_i0forward_frame_2 - 9.6e-07 29.1 0.0 1.2e-06 28.8 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 NODE_65792_length_243_cov_3.466346_g57851_i0forward_frame_2 - 0.00014 22.1 0.0 0.00018 21.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain UK PF02512.14 NODE_65789_length_243_cov_3.951923_g57848_i0forward_frame_2 - 0.01 16.3 0.1 0.011 16.2 0.1 1.1 1 0 0 1 1 1 0 Virulence determinant Inhibitor_I68 PF10468.9 NODE_65789_length_243_cov_3.951923_g57848_i0forward_frame_2 - 0.011 16.1 1.3 0.015 15.7 1.3 1.1 1 0 0 1 1 1 0 Carboxypeptidase inhibitor I68 Peptidase_M16 PF00675.20 NODE_65788_length_243_cov_4.048077_g57847_i0reverse_frame_2 - 0.00024 21.1 0.0 0.00028 20.9 0.0 1.1 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 NODE_65788_length_243_cov_4.048077_g57847_i0reverse_frame_2 - 0.077 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Peptidase M16 inactive domain ThrE PF06738.12 NODE_65787_length_243_cov_4.394231_g57846_i0reverse_frame_3 - 0.035 13.5 0.1 0.044 13.1 0.1 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter Spp-24 PF07448.11 NODE_65787_length_243_cov_4.394231_g57846_i0forward_frame_3 - 0.031 14.5 1.4 0.047 13.9 1.4 1.3 1 0 0 1 1 1 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain Aminotran_1_2 PF00155.21 NODE_65787_length_243_cov_4.394231_g57846_i0forward_frame_2 - 2.5e-14 53.3 0.0 2.8e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II S_2TMBeta PF18153.1 NODE_65786_length_243_cov_4.572115_g57845_i0reverse_frame_2 - 0.2 11.4 4.0 0.23 11.2 4.0 1.1 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain Sod_Cu PF00080.20 NODE_65780_length_243_cov_12.812500_g57839_i0reverse_frame_3 - 0.0012 19.0 0.4 0.002 18.3 0.2 1.5 2 0 0 2 2 2 1 Copper/zinc superoxide dismutase (SODC) DUF5427 PF10310.9 NODE_65779_length_243_cov_20.014423_g57838_i0reverse_frame_3 - 0.066 12.2 0.1 0.066 12.2 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5427) MBF1 PF08523.10 NODE_65778_length_243_cov_20.653846_g57837_i0reverse_frame_2 - 0.18 12.3 2.9 0.24 11.9 2.9 1.3 1 1 0 1 1 1 0 Multiprotein bridging factor 1 Oxidored_q3 PF00499.20 NODE_65777_length_243_cov_21.552885_g57836_i0forward_frame_3 - 0.15 11.8 4.8 0.16 11.7 4.8 1.0 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ndc1_Nup PF09531.10 NODE_65767_length_243_cov_43.062500_g57826_i0reverse_frame_2 - 0.25 10.0 5.8 0.3 9.7 5.8 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PRP38_assoc PF12871.7 NODE_65767_length_243_cov_43.062500_g57826_i0forward_frame_3 - 0.18 12.4 33.4 0.25 12.0 33.4 1.2 1 0 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term DUF3867 PF12983.7 NODE_65766_length_243_cov_43.475962_g57825_i0reverse_frame_3 - 0.014 15.5 1.1 0.016 15.3 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3867) CRT-like PF08627.10 NODE_65764_length_243_cov_46.466346_g57823_i0reverse_frame_2 - 0.042 12.8 0.5 0.044 12.7 0.5 1.0 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like MRI PF15325.6 NODE_65763_length_243_cov_46.865385_g57822_i0forward_frame_3 - 0.13 13.3 5.1 0.16 13.1 5.1 1.1 1 0 0 1 1 1 0 Modulator of retrovirus infection Rrn6 PF10214.9 NODE_65763_length_243_cov_46.865385_g57822_i0forward_frame_3 - 4.2 5.7 13.9 4.6 5.6 13.9 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor OmdA PF13376.6 NODE_65762_length_243_cov_48.173077_g57821_i0reverse_frame_2 - 3.9e-05 23.6 0.8 5.7e-05 23.0 0.8 1.2 1 0 0 1 1 1 1 Bacteriocin-protection, YdeI or OmpD-Associated zf-DNL PF05180.12 NODE_65757_length_243_cov_51.346154_g57816_i0forward_frame_3 - 0.018 15.0 1.1 0.034 14.1 1.1 1.6 1 1 0 1 1 1 0 DNL zinc finger Phospholamban PF04272.14 NODE_65756_length_243_cov_51.639423_g57815_i0reverse_frame_3 - 0.014 14.8 0.3 0.014 14.8 0.3 1.6 2 0 0 2 2 2 0 Phospholamban AAA_23 PF13476.6 NODE_65755_length_243_cov_52.461538_g57814_i0reverse_frame_2 - 5.3 7.5 14.7 5.4 7.5 14.7 1.1 1 0 0 1 1 1 0 AAA domain C2-C2_1 PF11618.8 NODE_65752_length_243_cov_55.173077_g57811_i0reverse_frame_2 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 First C2 domain of RPGR-interacting protein 1 DUF5502 PF17606.2 NODE_65748_length_243_cov_58.937500_g57807_i0reverse_frame_2 - 0.038 14.7 0.1 0.045 14.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5502) JAKMIP_CC3 PF16034.5 NODE_65746_length_243_cov_61.504808_g57805_i0reverse_frame_2 - 0.14 12.1 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 JAKMIP CC3 domain DUF5363 PF17320.2 NODE_65744_length_243_cov_67.942308_g57803_i0forward_frame_3 - 0.34 10.8 1.1 1.8 8.5 0.3 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5363) TIR PF01582.20 NODE_65741_length_243_cov_72.504808_g57800_i0forward_frame_2 - 0.0078 16.0 0.0 0.0092 15.8 0.0 1.1 1 0 0 1 1 1 1 TIR domain Cas_APE2256 PF09651.10 NODE_65740_length_243_cov_78.004808_g57799_i0forward_frame_2 - 0.097 12.6 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_APE2256) Prothymosin PF03247.14 NODE_65738_length_243_cov_89.110577_g57797_i0forward_frame_3 - 0.17 12.4 0.2 0.2 12.1 0.2 1.1 1 0 0 1 1 1 0 Prothymosin/parathymosin family ApoO PF09769.9 NODE_65736_length_243_cov_92.879808_g57795_i0forward_frame_2 - 0.018 15.0 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Apolipoprotein O IF3_N PF05198.16 NODE_65732_length_243_cov_99.706731_g57791_i0reverse_frame_2 - 0.25 11.7 3.5 0.35 11.2 3.5 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-3, N-terminal domain DUF3677 PF12432.8 NODE_65729_length_243_cov_119.846154_g57788_i0forward_frame_3 - 0.0088 16.3 0.0 0.01 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3677) KASH PF10541.9 NODE_65727_length_243_cov_126.538462_g57786_i0forward_frame_2 - 0.18 12.1 2.9 11 6.3 0.3 2.1 2 0 0 2 2 2 0 Nuclear envelope localisation domain Transposon_TraM PF12508.8 NODE_65723_length_243_cov_150.278846_g57782_i0forward_frame_2 - 0.26 11.0 0.0 0.32 10.7 0.0 1.1 1 0 0 1 1 1 0 Conjugative transposon, TraM AA_permease PF00324.21 NODE_65716_length_243_cov_250.105769_g57775_i0reverse_frame_3 - 0.084 11.4 0.1 0.089 11.4 0.1 1.0 1 0 0 1 1 1 0 Amino acid permease Chromadorea_ALT PF05535.12 NODE_65715_length_243_cov_294.105769_g57774_i0reverse_frame_3 - 0.0022 18.1 0.6 0.0027 17.8 0.6 1.1 1 0 0 1 1 1 1 Chromadorea ALT protein DUF1631 PF07793.11 NODE_65713_length_243_cov_328.120192_g57772_i0reverse_frame_2 - 0.058 11.8 0.0 0.06 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) JAB PF01398.21 NODE_65713_length_243_cov_328.120192_g57772_i0reverse_frame_2 - 0.087 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 JAB1/Mov34/MPN/PAD-1 ubiquitin protease PhnA_Zn_Ribbon PF08274.12 ORF99103 - 0.21 11.6 6.2 0.27 11.2 5.0 1.9 1 1 1 2 2 2 0 PhnA Zinc-Ribbon Glu-tRNAGln PF02686.15 ORF98795 - 0.086 13.2 0.7 0.2 12.0 0.3 1.7 2 0 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit Mntp PF02659.15 ORF98706 - 0.013 15.3 0.7 0.014 15.2 0.7 1.1 1 0 0 1 1 1 0 Putative manganese efflux pump MatE PF01554.18 ORF98306 - 3.3e-17 62.6 1.8 3.6e-17 62.5 1.8 1.0 1 0 0 1 1 1 1 MatE PEX11 PF05648.14 ORF98306 - 0.12 11.8 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Peroxisomal biogenesis factor 11 (PEX11) DUF3465 PF11948.8 ORF98065 - 0.11 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3465) Spidroin_N PF16763.5 ORF98014 - 0.0027 17.7 0.4 0.0036 17.3 0.3 1.3 1 1 0 1 1 1 1 Major ampullate spidroin 1, spider silk protein 1, N-term CREPT PF16566.5 ORF98014 - 0.029 14.6 5.2 0.029 14.5 5.2 1.0 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour TetR_C_13 PF16925.5 ORF98014 - 0.053 13.5 0.2 0.06 13.3 0.2 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain GvpL_GvpF PF06386.11 ORF98014 - 0.1 12.5 2.4 0.1 12.5 2.4 1.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF DUF1640 PF07798.11 ORF98014 - 0.11 12.5 7.3 0.26 11.3 7.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) HU-CCDC81_bac_2 PF18175.1 ORF98014 - 0.25 11.2 2.6 1.6 8.6 0.8 2.1 1 1 1 2 2 2 0 CCDC81-like prokaryotic HU domain 2 DUF4435 PF14491.6 ORF98014 - 0.42 10.5 7.6 0.48 10.3 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) DUF4407 PF14362.6 ORF98014 - 0.56 9.5 5.3 0.61 9.4 5.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YtxH PF12732.7 ORF98014 - 0.57 10.7 9.0 6.3 7.4 7.2 2.0 1 1 0 1 1 1 0 YtxH-like protein PIN_8 PF18476.1 ORF98014 - 0.59 10.0 8.2 0.64 9.8 8.2 1.0 1 0 0 1 1 1 0 PIN like domain ArAE_2_N PF10337.9 ORF98014 - 0.67 8.9 3.3 0.74 8.8 3.3 1.0 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal YkuI_C PF10388.9 ORF98014 - 0.67 9.7 5.9 0.67 9.7 5.5 1.3 1 1 0 1 1 1 0 EAL-domain associated signalling protein domain LMBR1 PF04791.16 ORF98014 - 8.9 5.1 6.6 9.5 5.0 6.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein FBP_C PF16571.5 ORF98013 - 0.17 11.4 4.0 1.6 8.2 4.0 1.9 1 1 0 1 1 1 0 FBP C-terminal treble-clef zinc-finger FA_synthesis PF02504.15 ORF97741 - 1.5 7.8 8.7 0.76 8.8 6.7 1.5 1 1 1 2 2 2 0 Fatty acid synthesis protein PA26 PF04636.13 ORF97571 - 0.065 12.2 0.5 0.072 12.0 0.5 1.0 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) DUF2559 PF10832.8 ORF97196 - 0.006 16.6 1.3 0.013 15.6 1.3 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2559) DHNA PF04038.12 ORF97129 - 0.038 14.5 1.6 0.041 14.4 1.6 1.1 1 0 0 1 1 1 0 Dihydroneopterin aldolase PID PF00640.23 ORF97129 - 0.31 11.0 5.9 0.4 10.7 5.9 1.3 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) RHH_1 PF01402.21 ORF96500 - 0.023 14.6 0.4 0.035 14.1 0.4 1.3 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family RHH_3 PF12651.7 ORF96500 - 0.056 13.4 0.2 0.096 12.7 0.2 1.4 1 0 0 1 1 1 0 Ribbon-helix-helix domain DUF2777 PF10949.8 ORF9637 - 0.041 13.6 0.0 0.056 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) GluR_Homer-bdg PF10606.9 ORF95844 - 0.15 12.3 0.0 0.71 10.1 0.0 1.8 2 0 0 2 2 2 0 Homer-binding domain of metabotropic glutamate receptor DUF3789 PF12664.7 ORF95469 - 0.41 10.4 2.5 0.59 9.9 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3789) CBM_14 PF01607.24 ORF95084 - 0.073 13.3 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Chitin binding Peritrophin-A domain PhnA_Zn_Ribbon PF08274.12 ORF95009 - 0.21 11.6 6.2 0.27 11.2 5.0 1.9 1 1 1 2 2 2 0 PhnA Zinc-Ribbon DUF4678 PF15727.5 ORF94905 - 0.022 14.0 0.9 0.025 13.9 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4678) Peptidase_A22B PF04258.13 ORF94784 - 7.2e-14 52.0 2.1 8.1e-14 51.8 2.1 1.0 1 0 0 1 1 1 1 Signal peptide peptidase Branch_AA_trans PF05525.13 ORF94784 - 0.048 12.5 0.3 0.057 12.3 0.3 1.0 1 0 0 1 1 1 0 Branched-chain amino acid transport protein FAF PF11250.8 ORF94564 - 0.076 13.3 0.7 0.11 12.7 0.7 1.2 1 0 0 1 1 1 0 Fantastic Four meristem regulator zf-H2C2_2 PF13465.6 ORF94014 - 1.5e-07 31.5 2.4 2.5e-07 30.8 2.4 1.4 1 0 0 1 1 1 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF94014 - 1.5e-05 25.2 9.1 0.00016 21.9 3.9 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF94014 - 0.0058 17.4 6.6 0.034 15.0 2.9 2.4 2 0 0 2 2 2 1 C2H2-type zinc finger zf-BED PF02892.15 ORF94014 - 0.02 14.9 1.6 0.051 13.6 1.5 1.8 1 1 0 1 1 1 0 BED zinc finger PriA_CRR PF18319.1 ORF94014 - 0.061 13.3 4.9 0.096 12.7 4.9 1.3 1 0 0 1 1 1 0 PriA DNA helicase Cys-rich region (CRR) domain Metallophos PF00149.28 ORF93895 - 5.9e-12 46.5 0.0 5.9e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase TMEM187 PF15100.6 ORF93780 - 0.061 12.9 0.0 0.062 12.9 0.0 1.0 1 0 0 1 1 1 0 TMEM187 protein family DUF2207 PF09972.9 ORF937 - 0.0085 14.9 0.0 0.0096 14.7 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Chordopox_A13L PF05961.11 ORF937 - 0.01 16.1 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 0 Chordopoxvirus A13L protein SKG6 PF08693.10 ORF937 - 0.025 14.0 7.6 0.046 13.1 7.6 1.4 1 0 0 1 1 1 0 Transmembrane alpha-helix domain DUF4834 PF16118.5 ORF937 - 0.06 14.3 0.0 0.078 14.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) CcmH PF03918.14 ORF937 - 0.062 12.6 0.0 0.072 12.4 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein Pox_A14 PF05767.12 ORF937 - 0.07 13.3 0.0 0.085 13.0 0.0 1.1 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 ArsP_1 PF03773.13 ORF937 - 0.07 12.3 0.0 0.079 12.1 0.0 1.0 1 0 0 1 1 1 0 Predicted permease Vpu PF00558.19 ORF937 - 0.11 12.3 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Vpu protein RPA_interact_C PF14768.6 ORF91814 - 0.045 14.3 0.1 0.049 14.2 0.1 1.1 1 0 0 1 1 1 0 Replication protein A interacting C-terminal RD3 PF14473.6 ORF91742 - 0.033 14.0 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 RD3 protein HOCHOB PF17943.1 ORF91742 - 0.091 13.5 0.1 0.11 13.2 0.1 1.0 1 0 0 1 1 1 0 Homeobox-cysteine loop-homeobox EF-hand_8 PF13833.6 ORF9144 - 0.019 14.8 0.1 0.023 14.6 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_7 PF13499.6 ORF9144 - 0.059 13.8 0.1 0.067 13.6 0.1 1.1 1 0 0 1 1 1 0 EF-hand domain pair Ribosomal_L27 PF01016.19 ORF91276 - 2e-21 75.8 0.4 2.3e-21 75.6 0.4 1.1 1 0 0 1 1 1 1 Ribosomal L27 protein DUF927 PF06048.11 ORF91276 - 0.019 14.5 0.0 0.02 14.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF927) zf-C2H2_jaz PF12171.8 ORF91198 - 0.55 10.6 0.2 0.55 10.6 0.2 3.2 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding zf-Tim10_DDP PF02953.15 ORF91113 - 5.2e-09 35.6 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF91113 - 0.057 14.0 0.1 0.073 13.7 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 zf-Tim10_DDP PF02953.15 ORF911 - 5.2e-09 35.6 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF911 - 0.057 14.0 0.1 0.073 13.7 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 Pkinase PF00069.25 ORF90541 - 2.6e-16 59.8 0.0 2.9e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90541 - 1.7e-05 24.2 0.0 1.9e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase HD PF01966.22 ORF90326 - 1.2e-05 25.6 0.1 1.7e-05 25.0 0.1 1.3 1 1 0 1 1 1 1 HD domain zf-Tim10_DDP PF02953.15 ORF9 - 7e-09 35.2 8.0 8.9e-09 34.9 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF9 - 0.062 13.9 0.1 0.08 13.5 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 LLC1 PF14945.6 ORF89985 - 0.0083 16.7 0.0 0.0093 16.5 0.0 1.1 1 0 0 1 1 1 1 Normal lung function maintenance, Low in Lung Cancer 1 protein 7TM_GPCR_Srab PF10292.9 ORF89873 - 0.27 10.1 2.0 0.27 10.1 2.0 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor DUF5442 PF17514.2 ORF89102 - 0.039 14.1 0.1 0.045 13.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5442) DNA_repr_REX1B PF14966.6 ORF88677 - 0.036 14.7 0.6 0.043 14.5 0.6 1.1 1 0 0 1 1 1 0 DNA repair REX1-B P3A PF08727.11 ORF88677 - 0.062 12.7 0.7 0.11 11.9 0.1 1.7 2 0 0 2 2 2 0 Poliovirus 3A protein like EamA PF00892.20 ORF88245 - 1e-10 41.9 2.3 1.2e-10 41.7 2.3 1.1 1 0 0 1 1 1 1 EamA-like transporter family PUNUT PF16913.5 ORF88245 - 0.00029 20.2 2.1 0.00029 20.2 2.1 1.0 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport FA_synthesis PF02504.15 ORF87174 - 1.5 7.8 8.7 0.76 8.8 6.7 1.5 1 1 1 2 2 2 0 Fatty acid synthesis protein EamA PF00892.20 ORF86588 - 2.8e-05 24.3 0.5 3.5e-05 24.0 0.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family CRT-like PF08627.10 ORF86588 - 0.0035 16.3 0.1 0.0039 16.2 0.1 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like DoxD PF04173.13 ORF86588 - 0.068 13.1 0.0 0.083 12.8 0.0 1.1 1 0 0 1 1 1 0 TQO small subunit DoxD DUF2848 PF11010.8 ORF85680 - 0.071 12.7 0.0 0.08 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2848) 2OG-FeII_Oxy_2 PF13532.6 ORF85587 - 0.0012 19.0 0.1 0.0015 18.8 0.1 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily zf-Tim10_DDP PF02953.15 ORF85384 - 5.2e-09 35.6 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF85384 - 0.057 14.0 0.1 0.073 13.7 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 FtsX PF02687.21 ORF84727 - 0.078 13.4 1.5 0.088 13.3 0.5 1.5 1 1 1 2 2 2 0 FtsX-like permease family Peptidase_C42 PF05533.12 ORF83482 - 0.019 15.0 0.0 0.022 14.8 0.0 1.1 1 0 0 1 1 1 0 Beet yellows virus-type papain-like endopeptidase C42 PQQ_3 PF13570.6 ORF83244 - 9.7e-05 22.7 0.3 0.014 15.9 0.0 2.7 2 1 1 3 3 3 2 PQQ-like domain DUF5508 PF17621.2 ORF83244 - 0.13 11.4 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5508) Phi29_Phage_SSB PF17427.2 ORF83212 - 0.089 13.0 0.3 0.12 12.6 0.3 1.1 1 0 0 1 1 1 0 Phage Single-stranded DNA-binding protein APG12 PF04110.13 ORF83088 - 0.068 13.6 0.6 0.079 13.4 0.6 1.2 1 0 0 1 1 1 0 Ubiquitin-like autophagy protein Apg12 DUF3377 PF11857.8 ORF82833 - 0.0068 16.3 4.3 0.0097 15.8 4.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3377) KASH PF10541.9 ORF82833 - 0.073 13.3 2.8 0.11 12.8 2.8 1.3 1 0 0 1 1 1 0 Nuclear envelope localisation domain RHD_DNA_bind PF00554.22 ORF82675 - 0.12 12.3 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 Rel homology DNA-binding domain ACCA PF03255.14 ORF82649 - 0.45 10.4 1.9 2.4 8.0 0.2 2.0 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PH PF00169.29 ORF82501 - 0.0038 17.7 0.0 0.005 17.3 0.0 1.2 1 0 0 1 1 1 1 PH domain zf-like PF04071.12 ORF82215 - 0.23 11.4 4.3 0.34 10.9 4.3 1.2 1 0 0 1 1 1 0 Cysteine-rich small domain Gag_p6 PF08705.11 ORF82138 - 0.017 15.3 0.0 0.027 14.7 0.0 1.2 1 0 0 1 1 1 0 Gag protein p6 DBD_Tnp_Mut PF03108.15 ORF81729 - 0.059 13.4 0.5 0.088 12.8 0.5 1.3 1 0 0 1 1 1 0 MuDR family transposase MFS_1 PF07690.16 ORF80780 - 1.2e-05 24.4 0.2 1.2e-05 24.4 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Mg_trans_NIPA PF05653.14 ORF80780 - 0.0015 17.7 2.0 0.0018 17.5 2.0 1.1 1 0 0 1 1 1 1 Magnesium transporter NIPA DUF2418 PF10332.9 ORF80780 - 0.026 15.0 0.4 0.031 14.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) Spore_YabQ PF09578.10 ORF80780 - 0.29 11.4 5.5 0.58 10.4 0.3 2.1 1 1 1 2 2 2 0 Spore cortex protein YabQ (Spore_YabQ) IMD PF08397.11 ORF7973 - 0.0033 16.8 0.6 0.0038 16.6 0.6 1.0 1 0 0 1 1 1 1 IRSp53/MIM homology domain PSII_Pbs27 PF13326.6 ORF7973 - 0.011 16.1 1.0 0.012 16.0 1.0 1.2 1 0 0 1 1 1 0 Photosystem II Pbs27 Caskin-tail PF16632.5 ORF7973 - 0.075 13.5 1.0 0.11 13.0 1.0 1.2 1 0 0 1 1 1 0 C-terminal region of Caskin FliN_N PF16973.5 ORF7973 - 0.14 12.0 2.0 0.17 11.8 1.5 1.5 1 1 0 1 1 1 0 Flagellar motor switch protein FliN N-terminal dCache_2 PF08269.11 ORF7973 - 0.18 11.0 4.1 0.19 10.8 4.1 1.0 1 0 0 1 1 1 0 Cache domain Peptidase_M20 PF01546.28 ORF79402 - 3.7e-08 33.3 0.0 4e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 DUF3377 PF11857.8 ORF79125 - 0.0068 16.3 4.3 0.0097 15.8 4.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3377) KASH PF10541.9 ORF79125 - 0.073 13.3 2.8 0.11 12.8 2.8 1.3 1 0 0 1 1 1 0 Nuclear envelope localisation domain 7TM_GPCR_Srab PF10292.9 ORF79122 - 0.27 10.1 2.0 0.27 10.1 2.0 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor MRP-S24 PF14955.6 ORF7894 - 0.11 12.4 1.1 0.13 12.2 1.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S24 DUF2970 PF11174.8 ORF78688 - 0.094 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2970) DUF1270 PF06900.11 ORF78640 - 1 9.8 8.8 0.25 11.7 2.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1270) C12orf66_like PF09404.10 ORF78339 - 0.0043 15.9 0.3 0.0043 15.9 0.3 1.0 1 0 0 1 1 1 1 KICSTOR complex C12orf66 like GP24_25 PF17388.2 ORF78339 - 0.067 13.2 0.3 0.079 12.9 0.3 1.0 1 0 0 1 1 1 0 Tail assembly gene products 24 & 25 SYS1 PF09801.9 ORF78339 - 0.072 13.2 0.0 0.08 13.1 0.0 1.1 1 0 0 1 1 1 0 Integral membrane protein S linking to the trans Golgi network Mntp PF02659.15 ORF78182 - 0.013 15.3 0.7 0.014 15.2 0.7 1.1 1 0 0 1 1 1 0 Putative manganese efflux pump Pkinase PF00069.25 ORF77615 - 2.3e-14 53.4 0.1 2.4e-14 53.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF77615 - 2.1e-05 24.0 0.0 2.4e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RWP-RK PF02042.15 ORF77407 - 0.055 13.5 1.5 0.091 12.8 1.5 1.3 1 0 0 1 1 1 0 RWP-RK domain NrfD PF03916.14 ORF76554 - 2.4e-22 80.0 2.4 2.6e-22 79.9 2.4 1.0 1 0 0 1 1 1 1 Polysulphide reductase, NrfD Abhydrolase_1 PF00561.20 ORF76390 - 0.0038 16.9 0.0 0.0046 16.6 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF76390 - 0.13 12.9 0.0 0.14 12.8 0.0 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase family PhnA_Zn_Ribbon PF08274.12 ORF76183 - 0.21 11.6 6.2 0.27 11.2 5.0 1.9 1 1 1 2 2 2 0 PhnA Zinc-Ribbon DUF3405 PF11885.8 ORF75812 - 0.33 9.5 4.3 0.37 9.3 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) XAP5 PF04921.14 ORF75787 - 0.00061 19.7 2.0 0.00076 19.4 2.0 1.0 1 0 0 1 1 1 1 XAP5, circadian clock regulator PqiA PF04403.13 ORF757 - 0.02 14.8 2.1 0.027 14.3 1.9 1.3 1 1 0 1 1 1 0 Paraquat-inducible protein A eIF-5a PF01287.20 ORF75213 - 0.023 14.8 0.1 0.03 14.4 0.1 1.3 1 1 0 1 1 1 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold HU-CCDC81_bac_2 PF18175.1 ORF7464 - 0.11 12.4 0.0 3.1 7.8 0.0 2.1 2 0 0 2 2 2 0 CCDC81-like prokaryotic HU domain 2 Alpha_E3_glycop PF01563.16 ORF74322 - 0.022 14.8 0.0 0.027 14.5 0.0 1.1 1 0 0 1 1 1 0 Alphavirus E3 glycoprotein CtIP_N PF10482.9 ORF72917 - 0.0044 17.0 9.6 0.0053 16.8 9.6 1.1 1 0 0 1 1 1 1 Tumour-suppressor protein CtIP N-terminal domain KELK PF15796.5 ORF72917 - 0.071 13.6 14.6 1.2 9.6 7.1 2.2 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DASH_Dad4 PF08650.10 ORF72917 - 0.16 11.9 5.9 0.29 11.1 0.4 2.1 1 1 1 2 2 2 0 DASH complex subunit Dad4 Ax_dynein_light PF10211.9 ORF72917 - 0.2 11.6 13.5 0.24 11.3 13.5 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain DUF3450 PF11932.8 ORF72917 - 0.24 10.7 7.7 0.25 10.6 7.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ADIP PF11559.8 ORF72917 - 0.26 11.3 13.3 0.3 11.2 13.3 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding L_lactis_ph-MCP PF06673.11 ORF72917 - 0.38 9.7 4.8 0.4 9.6 4.8 1.2 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein YgaB PF14182.6 ORF72917 - 0.46 10.9 10.8 4.1 7.9 10.8 2.0 1 1 0 1 1 1 0 YgaB-like protein NAD_binding_6 PF08030.12 ORF72793 - 0.16 12.1 0.4 0.16 12.1 0.4 1.0 1 0 0 1 1 1 0 Ferric reductase NAD binding domain CRAL_TRIO PF00650.20 ORF72514 - 1.1e-17 64.2 1.0 1.1e-17 64.2 1.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF72514 - 0.00012 22.3 0.4 0.00012 22.2 0.4 1.0 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain MTCP1 PF08991.10 ORF71514 - 0.071 13.4 1.4 0.11 12.7 1.4 1.3 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type DUF5381 PF17353.2 ORF71509 - 0.082 12.7 3.5 0.089 12.5 3.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Sigma_reg_N PF13800.6 ORF71509 - 0.14 12.5 2.4 0.19 12.0 2.4 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal FAM76 PF16046.5 ORF7135 - 0.045 13.1 0.1 0.046 13.1 0.1 1.0 1 0 0 1 1 1 0 FAM76 protein Metallophos PF00149.28 ORF71092 - 5.9e-12 46.5 0.0 5.9e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Med17 PF10156.9 ORF70920 - 0.0053 15.5 0.7 0.0059 15.4 0.7 1.0 1 0 0 1 1 1 1 Subunit 17 of Mediator complex FeoB_associated PF12669.7 ORF7084 - 0.052 13.9 0.4 0.084 13.3 0.4 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein MetOD2 PF18548.1 ORF70709 - 0.0063 16.6 1.3 0.0086 16.2 1.3 1.3 1 0 0 1 1 1 1 Metanogen output domain 2 RNAse_A_bac PF18431.1 ORF70709 - 0.19 12.7 2.1 0.22 12.5 2.1 1.1 1 0 0 1 1 1 0 Bacterial CdiA-CT RNAse A domain V_ATPase_I PF01496.19 ORF70709 - 2.1 6.2 6.5 1.9 6.3 6.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TMPIT PF07851.13 ORF70709 - 7.7 5.7 7.0 8 5.6 7.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein RepB PF07506.11 ORF70473 - 0.19 11.8 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 RepB plasmid partitioning protein Patched PF02460.18 ORF70421 - 0.00044 18.5 3.1 0.00046 18.4 3.1 1.0 1 0 0 1 1 1 1 Patched family Sterol-sensing PF12349.8 ORF70421 - 0.011 15.6 1.5 0.011 15.6 1.5 1.0 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation DUF202 PF02656.15 ORF70421 - 0.034 14.6 4.0 0.046 14.2 4.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF202) DUF1168 PF06658.12 ORF69936 - 0.12 12.2 20.0 0.12 12.2 20.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) DUF728 PF05304.12 ORF69936 - 0.46 10.3 9.9 0.54 10.1 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) Gti1_Pac2 PF09729.9 ORF69936 - 1 9.4 13.2 1.1 9.4 13.2 1.0 1 0 0 1 1 1 0 Gti1/Pac2 family DUF4407 PF14362.6 ORF69936 - 3.9 6.8 5.2 4.4 6.6 5.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) RIC1 PF07064.13 ORF69764 - 0.02 14.3 2.7 0.021 14.3 2.7 1.1 1 0 0 1 1 1 0 RIC1 NHS PF15273.6 ORF69712 - 0.15 11.1 2.1 0.18 10.9 2.1 1.0 1 0 0 1 1 1 0 NHS-like Zn_ribbon_SprT PF17283.2 ORF68125 - 2.1 8.3 11.1 0.63 10.0 1.2 2.3 1 1 1 2 2 2 0 SprT-like zinc ribbon domain Nipped-B_C PF12830.7 ORF68122 - 0.37 10.7 2.0 0.41 10.6 2.0 1.2 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus Calc_CGRP_IAPP PF00214.19 ORF68108 - 0.02 15.2 0.0 0.021 15.2 0.0 1.1 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family TFIIF_beta PF02270.15 ORF67884 - 0.083 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 TFIIF, beta subunit HTH domain DUF4820 PF16091.5 ORF67834 - 8.4 5.7 11.7 9 5.6 11.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) rve_3 PF13683.6 ORF67796 - 5.1e-11 42.2 0.0 7.4e-11 41.7 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF67796 - 0.00011 22.3 0.0 0.00014 21.9 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve PF00665.26 ORF67796 - 0.00055 20.1 0.0 0.00086 19.5 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain TFIIB PF00382.19 ORF67712 - 0.00052 20.0 0.4 0.002 18.1 0.1 1.9 2 0 0 2 2 2 1 Transcription factor TFIIB repeat Cyclin_C PF02984.19 ORF67712 - 0.005 16.9 0.1 0.0062 16.6 0.1 1.2 1 0 0 1 1 1 1 Cyclin, C-terminal domain Cyclin_C_2 PF16899.5 ORF67712 - 0.041 14.3 0.8 0.068 13.6 0.8 1.4 1 1 0 1 1 1 0 Cyclin C-terminal domain DUF4051 PF13260.6 ORF67219 - 0.05 13.3 2.3 0.27 11.0 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) EF-hand_like PF09279.11 ORF67206 - 0.015 15.8 0.0 0.02 15.4 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide-specific phospholipase C, efhand-like CENP-L PF13092.6 ORF67206 - 0.059 13.6 0.0 0.07 13.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore complex Sim4 subunit Fta1 DUF3525 PF12039.8 ORF67206 - 0.11 11.2 0.0 0.12 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3525) zf-C3HC4_3 PF13920.6 ORF67075 - 0.021 14.7 4.2 0.021 14.7 4.2 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) FA_synthesis PF02504.15 ORF66087 - 1.5 7.8 8.7 0.76 8.8 6.7 1.5 1 1 1 2 2 2 0 Fatty acid synthesis protein DUF5381 PF17353.2 ORF64956 - 0.13 12.0 3.0 0.14 11.9 3.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) zf-NF-X1 PF01422.17 ORF64840 - 0.22 11.6 7.9 0.5 10.5 7.9 1.7 1 0 0 1 1 1 0 NF-X1 type zinc finger Pilt PF15453.6 ORF64788 - 0.029 13.8 0.5 0.033 13.6 0.5 1.0 1 0 0 1 1 1 0 Protein incorporated later into Tight Junctions DUF3135 PF11333.8 ORF64059 - 0.091 13.0 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) zf-Tim10_DDP PF02953.15 ORF64050 - 5.1e-09 35.7 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF64050 - 0.053 14.1 0.1 0.068 13.8 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 Fer4_4 PF12800.7 ORF63769 - 0.018 15.5 7.3 0.018 15.5 7.3 1.9 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 ORF63769 - 0.079 13.1 6.7 0.079 13.1 6.7 2.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4 PF00037.27 ORF63769 - 0.27 11.1 8.4 0.51 10.2 8.4 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain DUF1647 PF07801.11 ORF63737 - 0.04 13.7 0.2 0.051 13.3 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1647) CCM2_C PF16545.5 ORF63737 - 0.43 11.1 3.5 0.2 12.2 1.9 1.4 2 0 0 2 2 2 0 Cerebral cavernous malformation protein, harmonin-homology DUF3473 PF11959.8 ORF61854 - 0.12 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3473) Ribosomal_60s PF00428.19 ORF61706 - 0.0022 18.6 10.4 0.0028 18.2 10.4 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein Casc1 PF12366.8 ORF61706 - 0.021 14.3 2.8 0.025 14.1 2.8 1.0 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 LZ_Tnp_IS66 PF13007.7 ORF61706 - 0.23 12.2 4.2 0.33 11.8 4.2 1.4 1 1 0 1 1 1 0 Transposase C of IS166 homeodomain DUF334 PF03904.13 ORF61513 - 0.046 13.3 0.2 0.048 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) Agenet PF05641.12 ORF61245 - 0.013 16.0 0.7 6.1 7.4 0.3 2.2 2 0 0 2 2 2 0 Agenet domain Myosin_N PF02736.19 ORF61245 - 0.066 13.1 0.1 1.9 8.4 0.0 2.2 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain DUF2093 PF09866.9 ORF61245 - 0.074 12.5 1.8 0.13 11.7 1.8 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2093) HK_sensor PF16750.5 ORF61245 - 0.12 12.7 0.1 0.16 12.3 0.1 1.2 1 0 0 1 1 1 0 Sensor domain of 2-component histidine kinase WaaY PF06176.11 ORF61236 - 0.0086 15.7 0.0 0.0093 15.6 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) DnaB PF00772.21 ORF61236 - 0.16 12.1 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 DnaB-like helicase N terminal domain DUF2889 PF11136.8 ORF6077 - 0.047 14.0 1.1 0.054 13.8 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2889) GCD14_N PF14801.6 ORF59701 - 0.00011 21.9 0.5 0.00016 21.5 0.1 1.5 2 0 0 2 2 2 1 tRNA methyltransferase complex GCD14 subunit N-term Phage_SSB PF16773.5 ORF59701 - 0.097 12.7 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Lactococcus phage single-stranded DNA binding protein GerA PF03323.13 ORF59608 - 0.54 8.7 6.6 0.58 8.6 6.6 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein KNOX1 PF03790.13 ORF59591 - 0.015 15.0 0.3 0.034 13.9 0.3 1.5 1 0 0 1 1 1 0 KNOX1 domain DUF35_N PF12172.8 ORF59476 - 0.16 11.9 4.6 1.2 9.1 0.8 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) AAA_lid_3 PF17862.1 ORF59093 - 9.1e-10 38.2 0.0 1.3e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 AAA+ lid domain EIID-AGA PF03613.14 ORF58783 - 2.1e-20 73.0 2.5 2.2e-20 72.9 2.5 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component Cpn60_TCP1 PF00118.24 ORF58133 - 3.1e-11 42.6 0.0 3.5e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PqiA PF04403.13 ORF57273 - 0.02 14.8 2.1 0.027 14.3 1.9 1.3 1 1 0 1 1 1 0 Paraquat-inducible protein A WHAMM-JMY_N PF15920.5 ORF56899 - 0.16 11.8 1.0 0.26 11.2 1.0 1.3 1 0 0 1 1 1 0 N-terminal of Junction-mediating and WASP homolog-associated Exonuc_VII_S PF02609.16 ORF56060 - 8.6e-22 76.9 2.8 1.1e-21 76.7 2.8 1.1 1 0 0 1 1 1 1 Exonuclease VII small subunit DUF4164 PF13747.6 ORF56060 - 0.15 12.3 2.6 7 7.0 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) PRD PF00874.20 ORF55964 - 0.15 12.3 5.7 0.23 11.8 5.4 1.5 1 1 0 1 1 1 0 PRD domain DUF763 PF05559.11 ORF55964 - 0.19 10.9 2.1 0.22 10.7 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF763) DUF4878 PF12870.7 ORF5592 - 0.11 12.9 0.1 0.14 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4878) MORN PF02493.20 ORF55899 - 5.5e-18 63.7 25.7 1.4e-08 34.1 1.4 4.0 4 0 0 4 4 4 3 MORN repeat DUSP PF06337.12 ORF5541 - 0.017 15.8 0.4 0.017 15.8 0.4 1.6 2 0 0 2 2 2 0 DUSP domain Tombus_P19 PF03220.13 ORF55320 - 0.015 15.0 0.1 0.015 15.0 0.1 1.2 1 0 0 1 1 1 0 Tombusvirus P19 core protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks303.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks303.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks303.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks303.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UPF0547 PF10571.9 ORF55148 - 0.3 11.2 5.2 0.56 10.3 5.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 Thioredoxin_2 PF13098.6 ORF55127 - 0.017 15.5 0.0 0.025 15.0 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain MSA-2c PF12238.8 ORF54872 - 0.15 12.0 0.6 0.17 11.8 0.6 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c NICE-1 PF15845.5 ORF54839 - 1.1 10.0 12.1 0.78 10.6 7.7 2.0 2 0 0 2 2 2 0 Cysteine-rich C-terminal 1 family Metallophos PF00149.28 ORF5460 - 5.9e-12 46.5 0.0 5.9e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PdxJ PF03740.13 ORF52922 - 0.11 11.6 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthesis protein PdxJ PRD_Mga PF08270.11 ORF52821 - 0.046 13.4 0.6 0.053 13.2 0.6 1.1 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) PRD domain Fib_alpha PF08702.10 ORF52821 - 0.066 13.4 1.6 0.072 13.3 1.6 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family UBX PF00789.20 ORF52780 - 0.00098 19.3 0.0 0.0012 19.0 0.0 1.2 1 0 0 1 1 1 1 UBX domain DUF1168 PF06658.12 ORF52654 - 0.12 12.2 20.0 0.12 12.2 20.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) DUF728 PF05304.12 ORF52654 - 0.46 10.3 9.9 0.54 10.1 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) Gti1_Pac2 PF09729.9 ORF52654 - 1 9.4 13.2 1.1 9.4 13.2 1.0 1 0 0 1 1 1 0 Gti1/Pac2 family DUF4407 PF14362.6 ORF52654 - 3.9 6.8 5.2 4.4 6.6 5.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HHV6-IE PF03753.13 ORF52221 - 1.7 6.0 2.9 1.6 6.1 2.9 1.0 1 0 0 1 1 1 0 Human herpesvirus 6 immediate early protein DUF3017 PF11222.8 ORF51846 - 0.048 13.9 1.1 0.05 13.9 0.2 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3017) ACCA PF03255.14 ORF50875 - 0.45 10.4 1.9 2.4 8.0 0.2 2.0 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Dynamitin PF04912.14 ORF50870 - 0.0068 15.8 6.2 0.0068 15.8 6.2 1.0 1 0 0 1 1 1 1 Dynamitin ZapB PF06005.12 ORF50870 - 0.032 14.7 9.9 0.051 14.0 9.9 1.3 1 0 0 1 1 1 0 Cell division protein ZapB DUF2681 PF10883.8 ORF50870 - 0.24 11.8 5.9 0.3 11.5 5.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) JIP_LZII PF16471.5 ORF50870 - 0.27 11.4 7.7 0.55 10.4 2.7 2.2 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II Tho2 PF11262.8 ORF50870 - 0.71 9.0 4.8 0.83 8.8 4.8 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DivIC PF04977.15 ORF50870 - 0.81 9.5 11.3 1.5 8.6 8.6 2.0 1 1 1 2 2 2 0 Septum formation initiator DUF5320 PF17253.2 ORF50870 - 1.6 9.8 3.5 0.78 10.8 1.2 1.6 1 1 1 2 2 2 0 Family of unknown function (DUF5320) Circo_capsid PF02443.15 ORF5053 - 0.017 14.7 2.9 0.017 14.7 2.9 1.1 1 0 0 1 1 1 0 Circovirus capsid protein DUF648 PF04890.13 ORF50100 - 0.041 13.6 0.9 0.046 13.5 0.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF648) zf-Tim10_DDP PF02953.15 ORF50028 - 5.2e-09 35.6 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF50028 - 0.057 14.0 0.1 0.073 13.7 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 MetOD2 PF18548.1 ORF49751 - 0.0063 16.6 1.3 0.0086 16.2 1.3 1.3 1 0 0 1 1 1 1 Metanogen output domain 2 RNAse_A_bac PF18431.1 ORF49751 - 0.19 12.7 2.1 0.22 12.5 2.1 1.1 1 0 0 1 1 1 0 Bacterial CdiA-CT RNAse A domain V_ATPase_I PF01496.19 ORF49751 - 2.1 6.2 6.5 1.9 6.3 6.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TMPIT PF07851.13 ORF49751 - 7.7 5.7 7.0 8 5.6 7.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF3446 PF11928.8 ORF47964 - 4 7.8 12.0 6.9 7.1 12.0 1.4 1 1 0 1 1 1 0 Early growth response N-terminal domain FAP PF07174.11 ORF47863 - 2.6 7.4 12.8 2.8 7.3 12.8 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DUF1720 PF08226.11 ORF47648 - 0.069 13.6 0.6 0.089 13.2 0.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1720) Borealin PF10512.9 ORF47335 - 0.035 14.1 0.3 0.058 13.4 0.1 1.5 1 1 0 1 1 1 0 Cell division cycle-associated protein 8 PP2C PF00481.21 ORF4728 - 9.1e-08 32.0 0.1 9.9e-08 31.9 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DsrH PF04077.12 ORF4728 - 0.15 12.2 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 DsrH like protein Rb_C PF08934.10 ORF46675 - 0.005 16.6 0.9 0.0053 16.6 0.9 1.1 1 0 0 1 1 1 1 Rb C-terminal domain Nop14 PF04147.12 ORF46675 - 0.17 10.1 13.8 0.18 10.0 13.8 1.0 1 0 0 1 1 1 0 Nop14-like family DTHCT PF08070.11 ORF46675 - 0.5 11.1 7.1 0.7 10.7 7.1 1.4 1 1 0 1 1 1 0 DTHCT (NUC029) region Gp_dh_C PF02800.20 ORF45477 - 0.095 12.3 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DUF2012 PF09430.10 ORF45287 - 9e-07 29.0 0.4 1.2e-06 28.6 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2012) KNOX1 PF03790.13 ORF44963 - 0.015 15.0 0.3 0.034 13.9 0.3 1.5 1 0 0 1 1 1 0 KNOX1 domain Glyco_hydro81C PF17652.1 ORF44937 - 0.14 11.4 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 81 C-terminal domain DUF5099 PF17025.5 ORF4489 - 0.015 15.7 0.1 0.017 15.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5099) Pkinase PF00069.25 ORF44311 - 2.6e-16 59.8 0.0 2.9e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44311 - 1.7e-05 24.2 0.0 1.9e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF44245 - 1.3e-16 60.7 0.1 1.4e-16 60.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44245 - 3.9e-10 39.5 0.0 4.3e-10 39.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Sushi_2 PF09014.10 ORF44245 - 0.06 13.2 0.1 0.086 12.7 0.1 1.2 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain DUF2805 PF10985.8 ORF44245 - 0.13 12.7 0.0 0.21 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2805) Hydrolase_4 PF12146.8 ORF44107 - 0.0099 15.2 0.0 0.01 15.1 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF44107 - 0.049 13.7 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 TAP-like protein DUF5614 PF18474.1 ORF43860 - 0.097 12.0 0.2 0.11 11.7 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5614) DUF507 PF04368.13 ORF43112 - 0.00028 20.9 1.3 0.00029 20.8 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF507) Pex19 PF04614.12 ORF43112 - 0.014 15.2 1.0 0.014 15.1 0.9 1.3 1 1 0 1 1 1 0 Pex19 protein family DUF150_C PF17384.2 ORF43112 - 0.049 13.8 0.3 0.11 12.7 0.3 1.6 1 1 0 1 1 1 0 RimP C-terminal SH3 domain RRF_GI PF12614.8 ORF42659 - 0.0065 16.6 2.7 0.0068 16.6 2.7 1.2 1 0 0 1 1 1 1 Ribosome recycling factor Fzo_mitofusin PF04799.13 ORF42659 - 0.015 14.8 4.8 0.017 14.7 4.8 1.1 1 0 0 1 1 1 0 fzo-like conserved region Baculo_PEP_C PF04513.12 ORF42659 - 0.027 14.5 0.8 0.031 14.3 0.8 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus MICSWaP PF17018.5 ORF42659 - 0.03 13.9 2.7 0.096 12.2 2.7 1.8 1 1 0 1 1 1 0 Spore wall protein Syntaxin-6_N PF09177.11 ORF42659 - 0.059 13.9 3.2 0.091 13.3 3.2 1.3 1 0 0 1 1 1 0 Syntaxin 6, N-terminal DUF5446 PF17522.2 ORF42659 - 0.063 13.5 3.6 0.34 11.1 0.9 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5446) DUF3450 PF11932.8 ORF42659 - 0.12 11.7 7.3 0.12 11.6 7.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) XhlA PF10779.9 ORF42659 - 0.77 10.0 3.6 7.3 6.9 1.0 2.1 2 0 0 2 2 2 0 Haemolysin XhlA Scm3 PF10384.9 ORF42659 - 1.6 8.6 5.5 12 5.7 1.9 2.6 2 1 0 2 2 2 0 Centromere protein Scm3 Cyclin PF08613.11 ORF42561 - 0.1 12.9 0.1 0.11 12.8 0.1 1.1 1 0 0 1 1 1 0 Cyclin DUF2012 PF09430.10 ORF42033 - 9e-07 29.0 0.4 1.2e-06 28.6 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2012) Phospholamban PF04272.14 ORF41614 - 0.51 9.9 5.4 1.1 8.8 5.4 1.7 1 1 0 1 1 1 0 Phospholamban AC_N PF16214.5 ORF41538 - 5.8 5.9 7.5 6 5.9 7.5 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF997 PF06196.12 ORF41240 - 6.2e-31 106.2 1.2 6.9e-31 106.1 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF997) DuoxA PF10204.9 ORF41240 - 0.063 12.3 0.2 0.072 12.1 0.2 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor CrgA PF06781.12 ORF41240 - 0.71 10.0 6.4 1 9.5 0.4 2.1 1 1 1 2 2 2 0 Cell division protein CrgA DUF4212 PF13937.6 ORF41240 - 1.1 9.7 7.3 4.2 7.8 7.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4212) Phospholamban PF04272.14 ORF40947 - 0.51 9.9 5.4 1.1 8.8 5.4 1.7 1 1 0 1 1 1 0 Phospholamban Herpes_UL49_1 PF03117.14 ORF40798 - 0.031 13.6 1.5 4.3 6.5 1.2 2.0 1 1 1 2 2 2 0 UL49 family Trypan_PARP PF05887.11 ORF40446 - 0.07 13.1 2.9 0.08 12.9 2.5 1.3 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DEC1 PF15859.5 ORF40240 - 0.16 12.0 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Deleted in esophageal cancer 1 family Importin_rep_6 PF18829.1 ORF40056 - 0.031 14.4 0.1 0.04 14.0 0.1 1.2 1 0 0 1 1 1 0 Importin repeat 6 TFIIF_beta PF02270.15 ORF39910 - 0.083 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 TFIIF, beta subunit HTH domain RNF220 PF15926.5 ORF39600 - 0.077 12.6 0.1 0.081 12.5 0.1 1.0 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase RNF220 7TM_GPCR_Srab PF10292.9 ORF39333 - 0.27 10.1 2.0 0.27 10.1 2.0 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor Adeno_PV PF03910.13 ORF39202 - 1.4 7.5 7.0 1.5 7.5 7.0 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV PI3K_C2 PF00792.24 ORF3800 - 0.02 14.8 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase C2 Formyl_trans_C PF02911.18 ORF37370 - 1.4e-19 70.2 0.0 1.5e-19 70.0 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase, C-terminal domain ProQ_C PF17516.2 ORF37370 - 0.045 13.2 3.0 0.052 13.0 0.3 2.3 2 1 0 2 2 2 0 ProQ C-terminal domain HGTP_anticodon PF03129.20 ORF37107 - 2.5e-10 40.4 0.0 2.7e-10 40.3 0.0 1.0 1 0 0 1 1 1 1 Anticodon binding domain MtN3_slv PF03083.16 ORF36825 - 2e-14 53.4 0.5 2.2e-14 53.3 0.5 1.0 1 0 0 1 1 1 1 Sugar efflux transporter for intercellular exchange DUF2127 PF09900.9 ORF36572 - 0.011 16.0 0.2 0.015 15.6 0.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2127) Rz1 PF06085.11 ORF36567 - 0.1 12.4 0.4 5.3 6.9 0.0 2.4 2 0 0 2 2 2 0 Lipoprotein Rz1 precursor LysR_substrate PF03466.20 ORF36203 - 3.9e-15 55.8 0.1 4.4e-15 55.6 0.1 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Dimerisation PF08100.11 ORF36203 - 0.21 11.6 0.5 0.46 10.5 0.1 1.7 2 0 0 2 2 2 0 Dimerisation domain ABC_sub_bind PF04392.12 ORF36158 - 0.12 11.6 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 ABC transporter substrate binding protein UBA_5 PF16577.5 ORF35546 - 0.059 13.5 0.0 2 8.6 0.0 2.1 2 0 0 2 2 2 0 UBA domain CBM_14 PF01607.24 ORF35490 - 0.073 13.3 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Chitin binding Peritrophin-A domain Phage_stabilise PF11134.8 ORF35066 - 0.077 11.8 0.2 0.086 11.7 0.2 1.0 1 0 0 1 1 1 0 Phage stabilisation protein DBD_Tnp_Mut PF03108.15 ORF34333 - 0.059 13.4 0.5 0.088 12.8 0.5 1.3 1 0 0 1 1 1 0 MuDR family transposase PXT1 PF15214.6 ORF33573 - 0.028 14.8 0.0 0.063 13.6 0.0 1.5 2 0 0 2 2 2 0 Peroxisomal testis-specific protein 1 FlaG PF03646.15 ORF3353 - 0.15 12.3 0.1 0.22 11.7 0.1 1.2 1 0 0 1 1 1 0 FlaG protein SSrecog PF03531.14 ORF33363 - 1.2e-13 50.7 0.0 1.5e-13 50.5 0.0 1.1 1 0 0 1 1 1 1 Structure-specific recognition protein (SSRP1) DUF5640 PF18692.1 ORF33363 - 0.0056 16.7 0.1 0.0064 16.5 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5640) P53_C PF11619.8 ORF32858 - 0.083 13.0 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Transcription factor P53 - C terminal domain Consortin_C PF15281.6 ORF32561 - 0.012 15.6 1.3 0.015 15.3 1.3 1.1 1 0 0 1 1 1 0 Consortin C-terminus Glutaredoxin PF00462.24 ORF32416 - 1.1e-07 31.9 0.1 1.5e-07 31.5 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 ORF32416 - 0.00072 20.0 0.1 0.00077 19.9 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain DUF836 PF05768.14 ORF32416 - 0.0018 18.6 0.1 0.0019 18.6 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) DSBA PF01323.20 ORF32416 - 0.0024 17.7 0.0 0.0024 17.7 0.0 1.1 1 0 0 1 1 1 1 DSBA-like thioredoxin domain SVM_signal PF12113.8 ORF32416 - 6 6.9 9.7 0.96 9.4 0.5 3.1 3 0 0 3 3 3 0 SVM protein signal sequence DUF334 PF03904.13 ORF31958 - 0.046 13.3 0.2 0.048 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) DUF2970 PF11174.8 ORF31420 - 0.094 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2970) rve_3 PF13683.6 ORF3139 - 5.1e-11 42.2 0.0 7.4e-11 41.7 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF3139 - 0.00011 22.3 0.0 0.00014 21.9 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve PF00665.26 ORF3139 - 0.00055 20.1 0.0 0.00086 19.5 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain XPA_N PF01286.18 ORF31113 - 0.84 9.7 2.5 24 5.1 2.5 2.4 1 1 0 1 1 1 0 XPA protein N-terminal DUF5355 PF17306.2 ORF29355 - 0.017 14.2 0.3 0.018 14.1 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5355) Gp_dh_C PF02800.20 ORF29286 - 0.095 12.3 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FXa_inhibition PF14670.6 ORF2919 - 0.023 15.0 3.7 0.041 14.2 3.7 1.5 1 1 0 1 1 1 0 Coagulation Factor Xa inhibitory site MORN PF02493.20 ORF28850 - 5.5e-18 63.7 25.7 1.4e-08 34.1 1.4 4.0 4 0 0 4 4 4 3 MORN repeat GluR_Homer-bdg PF10606.9 ORF28785 - 0.15 12.3 0.0 0.71 10.1 0.0 1.8 2 0 0 2 2 2 0 Homer-binding domain of metabotropic glutamate receptor NDUF_B8 PF05821.11 ORF28539 - 0.0004 20.3 0.0 0.0005 20.0 0.0 1.0 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) HpuA PF16960.5 ORF2775 - 0.1 11.7 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Haemoglobin-haptoglobin utilisation, porphyrin transporter DUF3978 PF13123.6 ORF2775 - 0.12 12.1 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3978) Cys_rich_FGFR PF00839.17 ORF26570 - 0.042 14.0 0.3 4.3 7.6 0.0 2.2 2 0 0 2 2 2 0 Cysteine rich repeat ALO PF04030.14 ORF25938 - 5.3e-08 33.0 0.3 5.6e-08 32.9 0.3 1.0 1 0 0 1 1 1 1 D-arabinono-1,4-lactone oxidase Pkinase PF00069.25 ORF25863 - 2.6e-16 59.8 0.0 2.9e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF25863 - 1.7e-05 24.2 0.0 1.9e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase UPF0547 PF10571.9 ORF25716 - 0.3 11.2 5.2 0.56 10.3 5.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 Collagen PF01391.18 ORF25634 - 0.0078 16.0 11.5 0.029 14.1 11.5 1.9 1 1 0 1 1 1 1 Collagen triple helix repeat (20 copies) DUF3405 PF11885.8 ORF25532 - 0.036 12.7 0.3 0.034 12.8 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) DUF1318 PF07027.12 ORF24421 - 0.13 12.7 0.0 0.2 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1318) 7TM_GPCR_Srab PF10292.9 ORF2391 - 0.27 10.1 2.0 0.27 10.1 2.0 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor DUF4081 PF13312.6 ORF23908 - 0.69 10.1 6.6 0.53 10.5 5.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4081) Ofd1_CTDD PF10637.9 ORF23895 - 0.018 14.4 0.5 0.018 14.4 0.5 1.1 1 0 0 1 1 1 0 Oxoglutarate and iron-dependent oxygenase degradation C-term Staphopain_pro PF14731.6 ORF23780 - 0.018 15.0 1.2 0.02 14.9 1.2 1.1 1 0 0 1 1 1 0 Staphopain proregion Helitron_like_N PF14214.6 ORF23392 - 0.071 13.3 0.4 0.065 13.4 0.4 1.2 1 1 0 1 1 1 0 Helitron helicase-like domain at N-terminus RYDR_ITPR PF01365.21 ORF23082 - 0.048 13.1 1.1 0.047 13.1 1.1 1.0 1 0 0 1 1 1 0 RIH domain HXXEE PF13787.6 ORF22699 - 0.042 14.6 0.1 9 7.2 0.0 2.1 1 1 0 2 2 2 0 Protein of unknown function with HXXEE motif Herpes_V23 PF01802.17 ORF22699 - 0.13 11.7 0.0 7 6.0 0.0 2.0 1 1 1 2 2 2 0 Herpesvirus VP23 like capsid protein FbpA PF05833.11 ORF22698 - 0.013 14.3 3.7 0.017 13.9 3.7 1.2 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) DUF4748 PF15932.5 ORF22698 - 0.099 12.4 3.1 0.16 11.7 3.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4748) TrkA_N PF02254.18 ORF22320 - 0.00059 20.1 0.0 0.00089 19.5 0.0 1.3 1 1 0 1 1 1 1 TrkA-N domain Endotoxin_C2 PF18449.1 ORF22320 - 0.12 12.7 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Delta endotoxin Cnd1_N PF12922.7 ORF21979 - 0.25 11.2 8.4 0.31 10.9 8.4 1.2 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term DUF3464 PF11947.8 ORF21979 - 8.5 6.1 13.5 9.4 6.0 13.5 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 OATP PF03137.20 ORF21979 - 8.6 4.5 7.1 9.4 4.4 7.1 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family OAD_gamma PF04277.13 ORF21979 - 9.5 6.9 6.7 11 6.7 6.7 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Pkinase PF00069.25 ORF21925 - 2.6e-16 59.8 0.0 2.9e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF21925 - 1.7e-05 24.2 0.0 1.9e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF717 PF05338.12 ORF21598 - 0.055 13.6 0.0 0.075 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF717) PqiA PF04403.13 ORF21554 - 0.02 14.8 2.1 0.027 14.3 1.9 1.3 1 1 0 1 1 1 0 Paraquat-inducible protein A DUF5409 PF17421.2 ORF20909 - 0.007 17.1 0.4 0.011 16.4 0.4 1.4 1 1 0 1 1 1 1 Family of unknown function (DUF5409) Tho2 PF11262.8 ORF20476 - 0.28 10.3 2.9 0.31 10.2 2.9 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 HTH_AraC PF00165.23 ORF19896 - 5.4e-13 48.7 0.1 8.4e-13 48.1 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 ORF19896 - 2.9e-10 40.2 0.0 4.9e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MutS_IV PF05190.18 ORF19896 - 0.15 12.4 0.1 0.17 12.3 0.1 1.1 1 0 0 1 1 1 0 MutS family domain IV Pkinase PF00069.25 ORF19436 - 5.4e-05 22.7 0.0 5.6e-05 22.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain AWPM-19 PF05512.11 ORF18649 - 0.13 12.5 1.9 0.14 12.3 1.9 1.1 1 0 0 1 1 1 0 AWPM-19-like family Anticodon_1 PF08264.13 ORF18316 - 0.22 11.5 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA Cyt-b5 PF00173.28 ORF17838 - 1.9e-05 24.7 0.0 1.9e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain TMA7 PF09072.10 ORF17423 - 8.6 7.3 7.0 10 7.1 0.7 2.3 2 0 0 2 2 2 0 Translation machinery associated TMA7 DUF3377 PF11857.8 ORF1716 - 0.0068 16.3 4.3 0.0097 15.8 4.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3377) KASH PF10541.9 ORF1716 - 0.073 13.3 2.8 0.11 12.8 2.8 1.3 1 0 0 1 1 1 0 Nuclear envelope localisation domain ACR_tran PF00873.19 ORF17114 - 9.9e-28 96.4 11.8 1.1e-27 96.2 11.8 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Orf78 PF06024.12 ORF17114 - 0.11 12.8 0.1 0.15 12.4 0.1 1.3 1 1 0 1 1 1 0 Orf78 (ac78) DUF2457 PF10446.9 ORF1701 - 5.3 6.1 5.6 5.2 6.1 5.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) EamA PF00892.20 ORF16835 - 1e-10 41.9 2.3 1.2e-10 41.7 2.3 1.1 1 0 0 1 1 1 1 EamA-like transporter family PUNUT PF16913.5 ORF16835 - 0.00029 20.2 2.1 0.00029 20.2 2.1 1.0 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport ART PF01129.18 ORF16680 - 0.11 11.7 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 NAD:arginine ADP-ribosyltransferase NNMT_PNMT_TEMT PF01234.17 ORF16241 - 0.019 14.2 0.3 0.022 14.0 0.3 1.1 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family DUF452 PF04301.13 ORF16183 - 0.064 12.8 0.0 0.071 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF452) Ras PF00071.22 ORF16183 - 0.077 12.6 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Ras family DUF3379 PF11859.8 ORF1615 - 0.19 11.1 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) DUF1310 PF07006.11 ORF15873 - 0.022 14.7 1.2 0.026 14.5 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1310) DUF1481 PF07356.12 ORF15873 - 0.032 14.0 0.7 0.034 13.9 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1481) SCIMP PF15050.6 ORF15484 - 0.13 12.7 0.8 0.16 12.4 0.8 1.2 1 0 0 1 1 1 0 SCIMP protein DUF1318 PF07027.12 ORF15384 - 0.13 12.7 0.0 0.2 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1318) PqiA PF04403.13 ORF14874 - 0.02 14.8 2.1 0.027 14.3 1.9 1.3 1 1 0 1 1 1 0 Paraquat-inducible protein A DUF969 PF06149.12 ORF14356 - 0.18 11.2 0.1 0.19 11.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF969) DUF2642 PF10842.8 ORF14320 - 0.086 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2642) TRAPP PF04051.16 ORF14320 - 0.093 12.4 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Transport protein particle (TRAPP) component Adeno_E3_CR1 PF02440.15 ORF14007 - 0.092 12.5 0.1 0.27 11.0 0.0 1.7 1 1 1 2 2 2 0 Adenovirus E3 region protein CR1 Trimer_CC PF08954.11 ORF13822 - 0.00051 19.5 1.6 0.0011 18.4 0.7 1.9 2 0 0 2 2 2 1 Trimerisation motif AAA_13 PF13166.6 ORF13822 - 0.0034 16.1 0.3 0.0034 16.1 0.3 1.0 1 0 0 1 1 1 1 AAA domain FmiP_Thoc5 PF09766.9 ORF13822 - 0.0055 16.0 0.8 0.0056 16.0 0.8 1.0 1 0 0 1 1 1 1 Fms-interacting protein/Thoc5 THOC7 PF05615.13 ORF13822 - 0.0059 16.9 0.2 0.006 16.9 0.2 1.2 1 0 0 1 1 1 1 Tho complex subunit 7 HR1 PF02185.16 ORF13822 - 0.012 15.7 3.0 0.019 15.1 3.0 1.3 1 0 0 1 1 1 0 Hr1 repeat Jnk-SapK_ap_N PF09744.9 ORF13822 - 0.02 15.1 0.4 0.023 14.9 0.4 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Sipho_Gp157 PF05565.11 ORF13822 - 0.02 14.9 0.8 0.021 14.8 0.7 1.3 1 1 0 1 1 1 0 Siphovirus Gp157 DUF4349 PF14257.6 ORF13822 - 0.03 13.8 1.4 0.038 13.4 1.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4349) GEP5 PF17053.5 ORF13486 - 0.037 13.9 0.0 0.037 13.9 0.0 1.1 1 0 0 1 1 1 0 Genetic interactor of prohibitin 5 PA28_alpha PF02251.18 ORF13486 - 0.098 12.7 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Proteasome activator pa28 alpha subunit DUF5099 PF17025.5 ORF12981 - 0.015 15.7 0.1 0.017 15.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5099) Sec61_beta PF03911.16 ORF12358 - 7.6e-09 35.5 1.5 9.6e-09 35.1 1.5 1.2 1 0 0 1 1 1 1 Sec61beta family Spore_YtfJ PF09579.10 ORF12358 - 0.021 15.0 0.4 0.025 14.7 0.4 1.2 1 0 0 1 1 1 0 Sporulation protein YtfJ (Spore_YtfJ) PqiA PF04403.13 ORF12141 - 0.02 14.8 2.1 0.027 14.3 1.9 1.3 1 1 0 1 1 1 0 Paraquat-inducible protein A MORN PF02493.20 ORF12068 - 5.5e-18 63.7 25.7 1.4e-08 34.1 1.4 4.0 4 0 0 4 4 4 3 MORN repeat RPW8 PF05659.11 ORF12030 - 0.032 13.9 0.6 0.17 11.6 0.1 1.8 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DHHC PF01529.20 ORF11996 - 0.022 14.9 3.4 0.03 14.4 3.4 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase RNA_pol_Rpc4 PF05132.14 ORF11923 - 2.5e-07 31.2 0.3 6.4e-07 29.9 0.3 1.6 1 1 1 2 2 2 1 RNA polymerase III RPC4 DUF3871 PF12987.7 ORF11527 - 0.11 11.2 0.3 0.12 11.2 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3871) Adeno_E3_CR1 PF02440.15 ORF11352 - 0.092 12.5 0.1 0.27 11.0 0.0 1.7 1 1 1 2 2 2 0 Adenovirus E3 region protein CR1 Chorion_2 PF03964.15 ORF112456 - 0.025 15.4 1.4 0.034 15.0 1.4 1.3 1 0 0 1 1 1 0 Chorion family 2 BPD_transp_2 PF02653.16 ORF112203 - 0.062 12.5 0.4 0.068 12.3 0.4 1.0 1 0 0 1 1 1 0 Branched-chain amino acid transport system / permease component Trimer_CC PF08954.11 ORF111893 - 0.18 11.4 0.8 0.28 10.8 0.8 1.2 1 0 0 1 1 1 0 Trimerisation motif NHS PF15273.6 ORF111479 - 0.15 11.1 2.1 0.18 10.9 2.1 1.0 1 0 0 1 1 1 0 NHS-like Paramyxo_C PF01692.18 ORF11136 - 0.12 11.7 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 Paramyxovirus non-structural protein C YoaP PF14268.6 ORF111336 - 0.16 11.5 0.1 0.31 10.6 0.1 1.5 1 0 0 1 1 1 0 YoaP-like Mut7-C PF01927.16 ORF111178 - 0.018 15.1 0.0 0.019 15.1 0.0 1.0 1 0 0 1 1 1 0 Mut7-C RNAse domain Med26 PF08711.11 ORF110903 - 0.01 15.8 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 0 TFIIS helical bundle-like domain RabGAP-TBC PF00566.18 ORF110725 - 1.5e-05 24.7 0.5 5.6e-05 22.9 0.3 1.8 2 0 0 2 2 2 1 Rab-GTPase-TBC domain DUF1834 PF08873.11 ORF110388 - 0.17 11.6 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1834) DUF3377 PF11857.8 ORF110354 - 0.0068 16.3 4.3 0.0097 15.8 4.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3377) KASH PF10541.9 ORF110354 - 0.073 13.3 2.8 0.11 12.8 2.8 1.3 1 0 0 1 1 1 0 Nuclear envelope localisation domain PBP1_TM PF14812.6 ORF110029 - 0.13 12.6 4.6 0.15 12.5 4.6 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal RXT2_N PF08595.11 ORF110029 - 0.48 10.4 3.4 0.53 10.3 3.4 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal ResIII PF04851.15 ORF109993 - 9e-05 22.5 0.1 0.00018 21.5 0.0 1.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 ORF109993 - 0.012 15.3 0.0 0.016 15.0 0.0 1.2 1 0 0 1 1 1 0 DEAD/DEAH box helicase HopW1-1 PF15457.6 ORF10991 - 0.14 11.4 1.1 0.15 11.3 1.1 1.1 1 0 0 1 1 1 0 Type III T3SS secreted effector HopW1-1/HopPmaA DNA_pol3_theta PF06440.11 ORF109594 - 0.14 11.9 0.8 0.2 11.3 0.8 1.3 1 0 0 1 1 1 0 DNA polymerase III, theta subunit DUF3379 PF11859.8 ORF10917 - 0.19 11.1 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) DUF5474 PF17568.2 ORF108725 - 0.15 12.1 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5474) RD3 PF14473.6 ORF108065 - 0.033 14.0 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 RD3 protein HOCHOB PF17943.1 ORF108065 - 0.091 13.5 0.1 0.11 13.2 0.1 1.0 1 0 0 1 1 1 0 Homeobox-cysteine loop-homeobox BH4 PF02180.17 ORF108055 - 0.073 12.9 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Bcl-2 homology region 4 TFIIS_C PF01096.18 ORF107946 - 0.0017 18.1 10.2 0.076 12.9 10.2 2.6 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) TFIIS_M PF07500.14 ORF107946 - 0.11 13.0 2.8 0.13 12.7 2.8 1.2 1 0 0 1 1 1 0 Transcription factor S-II (TFIIS), central domain OrfB_Zn_ribbon PF07282.11 ORF107946 - 1.3 9.0 6.5 3.1 7.8 0.6 2.2 1 1 0 2 2 2 0 Putative transposase DNA-binding domain DUF883 PF05957.13 ORF107672 - 0.04 14.5 3.9 0.048 14.3 3.9 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) MLANA PF14991.6 ORF106903 - 0.13 12.6 0.3 0.15 12.3 0.3 1.1 1 0 0 1 1 1 0 Protein melan-A tRNA_bind_3 PF17176.4 ORF106703 - 0.04 14.2 0.0 0.095 13.0 0.0 1.6 1 1 0 1 1 1 0 tRNA-binding domain 2TM PF13239.6 ORF106202 - 0.082 13.2 0.7 0.11 12.8 0.7 1.3 1 0 0 1 1 1 0 2TM domain DUF3926 PF13080.6 ORF105962 - 0.025 14.5 0.4 1.7 8.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3926) DEC1 PF15859.5 ORF105956 - 0.16 12.0 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Deleted in esophageal cancer 1 family HHV6-IE PF03753.13 ORF105795 - 1.7 6.0 2.9 1.6 6.1 2.9 1.0 1 0 0 1 1 1 0 Human herpesvirus 6 immediate early protein DUF2116 PF09889.9 ORF105664 - 0.052 13.5 1.0 0.097 12.7 1.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2545 PF10810.8 ORF105611 - 2.7e-42 142.8 12.0 2.9e-42 142.7 12.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2545) Aa_trans PF01490.18 ORF105611 - 0.23 10.1 9.4 0.27 9.9 9.4 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein ST7 PF04184.12 ORF105611 - 1.9 6.9 4.2 2.1 6.7 4.2 1.0 1 0 0 1 1 1 0 ST7 protein Adipogenin PF15202.6 ORF10528 - 1.8 8.7 5.0 0.48 10.5 2.1 1.6 2 0 0 2 2 2 0 Adipogenin zf-RING_2 PF13639.6 ORF105059 - 1.9e-07 31.3 7.2 2.4e-07 31.0 7.2 1.1 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF105059 - 5.4e-05 22.8 1.2 0.00075 19.2 0.5 2.3 2 0 0 2 2 2 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF105059 - 0.00068 19.2 4.9 0.00085 18.9 4.9 1.1 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 ORF105059 - 0.00092 19.0 8.1 0.0012 18.6 8.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 ORF105059 - 0.012 15.4 1.3 0.017 14.9 1.3 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-rbx1 PF12678.7 ORF105059 - 0.018 15.3 5.7 0.029 14.7 5.7 1.3 1 0 0 1 1 1 0 RING-H2 zinc finger domain Baculo_IE-1 PF05290.11 ORF105059 - 0.03 14.3 0.6 0.04 13.9 0.6 1.2 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) zf-HC5HC2H PF13771.6 ORF105059 - 0.035 14.4 0.7 0.035 14.4 0.7 1.5 1 1 0 1 1 1 0 PHD-like zinc-binding domain zf-RING_UBOX PF13445.6 ORF105059 - 0.04 14.0 6.3 0.04 13.9 2.1 2.1 2 0 0 2 2 2 0 RING-type zinc-finger Rad50_zn_hook PF04423.14 ORF105059 - 0.042 13.7 0.1 0.84 9.5 0.0 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif DUF2116 PF09889.9 ORF105059 - 0.048 13.7 6.5 0.46 10.5 1.5 2.2 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) zf-C3HC4 PF00097.25 ORF105059 - 0.062 13.2 7.2 0.13 12.2 7.2 1.5 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF105059 - 0.079 12.8 8.8 0.93 9.4 8.9 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 ORF105059 - 0.31 10.9 5.8 0.52 10.2 5.9 1.4 1 1 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_5 PF14634.6 ORF105059 - 0.35 10.9 9.0 1.4 9.0 8.6 1.9 1 1 1 2 2 2 0 zinc-RING finger domain Rtf2 PF04641.12 ORF105059 - 0.37 10.1 2.4 0.6 9.4 2.4 1.2 1 1 0 1 1 1 0 Rtf2 RING-finger Zn-ribbon_8 PF09723.10 ORF105059 - 0.44 10.7 6.0 0.72 10.0 1.8 2.2 1 1 2 3 3 3 0 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF105059 - 4.8 7.2 9.4 0.99 9.4 1.4 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Adeno_E3_CR1 PF02440.15 ORF104229 - 0.092 12.5 0.1 0.27 11.0 0.0 1.7 1 1 1 2 2 2 0 Adenovirus E3 region protein CR1 PDZ_2 PF13180.6 ORF103953 - 2.2e-17 63.1 0.7 2.4e-17 63.0 0.7 1.0 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF103953 - 4.2e-12 45.7 0.3 5.7e-12 45.3 0.3 1.2 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF103953 - 9.6e-10 38.7 2.3 1.3e-09 38.2 2.3 1.3 1 1 0 1 1 1 1 PDZ domain Tricorn_PDZ PF14685.6 ORF103953 - 2e-05 24.5 0.1 2.7e-05 24.0 0.1 1.3 1 1 0 1 1 1 1 Tricorn protease PDZ domain SLT_beta PF02258.16 ORF103589 - 0.031 14.3 0.1 0.057 13.4 0.1 1.5 1 0 0 1 1 1 0 Shiga-like toxin beta subunit CreD PF06123.12 ORF103470 - 0.001 18.0 0.1 0.001 18.0 0.1 1.0 1 0 0 1 1 1 1 Inner membrane protein CreD DUF678 PF05077.12 ORF103470 - 0.18 12.0 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF678) Vps39_1 PF10366.9 ORF103404 - 0.14 12.5 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 1 zf-Tim10_DDP PF02953.15 ORF101713 - 7.3e-09 35.1 8.1 9.1e-09 34.8 8.1 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger DUF4133 PF13571.6 ORF101501 - 0.29 11.5 2.8 0.46 10.8 2.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4133) Lipoprotein_3 PF00938.17 ORF101482 - 0.11 12.7 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Lipoprotein Acetyltransf_5 PF13444.6 ORF101216 - 0.03 15.0 0.1 0.035 14.8 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain ABATE PF07336.11 ORF100895 - 0.083 13.6 0.1 0.098 13.3 0.1 1.1 1 0 0 1 1 1 0 Putative stress-induced transcription regulator Dynactin_p22 PF07426.11 ORF100807 - 0.031 14.2 0.6 0.033 14.0 0.6 1.2 1 0 0 1 1 1 0 Dynactin subunit p22 AAA_lid_8 PF17868.1 ORF100114 - 4.7e-05 23.2 0.1 5.4e-05 23.0 0.1 1.2 1 0 0 1 1 1 1 AAA lid domain AAA_lid_2 PF17863.1 ORF100114 - 0.001 18.8 0.1 0.0018 18.1 0.1 1.4 1 0 0 1 1 1 1 AAA lid domain DUF929 PF06053.11 NODE_67658_length_235_cov_0.790000_g59717_i0reverse_frame_1 - 0.13 11.5 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) ApoB100_C PF12491.8 NODE_67653_length_235_cov_0.915000_g59712_i0reverse_frame_1 - 0.0026 17.7 1.0 0.0046 16.9 1.0 1.3 1 0 0 1 1 1 1 Apolipoprotein B100 C terminal DUF4763 PF15960.5 NODE_67653_length_235_cov_0.915000_g59712_i0reverse_frame_1 - 0.048 13.0 0.7 0.053 12.8 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Cys_rich_VLP PF14194.6 NODE_67652_length_235_cov_0.925000_g59711_i0forward_frame_1 - 0.092 12.9 0.6 1.5 9.0 0.1 2.1 2 0 0 2 2 2 0 Cysteine-rich VLP zinc_ribbon_12 PF11331.8 NODE_67645_length_235_cov_0.995000_g59704_i0reverse_frame_1 - 0.07 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Probable zinc-ribbon domain Pkinase PF00069.25 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 3.8e-13 49.4 0.1 4.5e-13 49.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Seadorna_VP7 PF07387.11 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 8.5e-06 25.0 0.0 8.6e-06 25.0 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 4.2e-05 23.6 0.0 4.7e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 4.9e-05 22.7 0.0 4.9e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 0.00079 18.5 0.1 0.00081 18.4 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Choline_kinase PF01633.20 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 0.086 12.4 0.1 0.098 12.2 0.1 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase YrbL-PhoP_reg PF10707.9 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 0.1 12.1 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Glyco_hydro_42C PF08533.10 NODE_67634_length_235_cov_1.145000_g59693_i0forward_frame_1 - 0.074 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain CBM_2 PF00553.19 NODE_67629_length_235_cov_1.175000_g59688_i0reverse_frame_1 - 0.12 12.7 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Cellulose binding domain Mit_KHE1 PF10173.9 NODE_67628_length_235_cov_1.175000_g59687_i0reverse_frame_1 - 0.037 14.1 0.7 0.043 13.9 0.7 1.0 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related HMG_box PF00505.19 NODE_67616_length_235_cov_1.235000_g59675_i0reverse_frame_1 - 0.051 14.0 0.0 0.063 13.7 0.0 1.1 1 0 0 1 1 1 0 HMG (high mobility group) box LPD39 PF18858.1 NODE_67616_length_235_cov_1.235000_g59675_i0reverse_frame_1 - 0.12 12.5 0.1 0.14 12.3 0.1 1.0 1 0 0 1 1 1 0 Large polyvalent protein associated domain 39 TSSC4 PF15264.6 NODE_67615_length_235_cov_1.245000_g59674_i0forward_frame_1 - 0.19 12.0 0.0 0.22 11.8 0.0 1.1 1 0 0 1 1 1 0 Tumour suppressing sub-chromosomal transferable candidate 4 GRIM-19 PF06212.12 NODE_67611_length_235_cov_1.265000_g59670_i0reverse_frame_1 - 0.015 15.2 0.2 0.019 14.9 0.2 1.0 1 0 0 1 1 1 0 GRIM-19 protein ANAPC4_WD40 PF12894.7 NODE_67603_length_235_cov_1.350000_g59662_i0forward_frame_1 - 0.042 14.1 0.0 0.06 13.7 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 NODE_67603_length_235_cov_1.350000_g59662_i0forward_frame_1 - 0.079 13.9 0.0 0.15 13.0 0.0 1.4 1 0 0 1 1 1 0 WD domain, G-beta repeat NAC PF01849.18 NODE_67599_length_235_cov_1.395000_g59658_i0reverse_frame_1 - 0.0085 16.0 0.1 0.012 15.6 0.1 1.4 1 0 0 1 1 1 1 NAC domain DUF4637 PF15470.6 NODE_67590_length_235_cov_1.470000_g59649_i0forward_frame_1 - 0.18 11.5 0.2 0.21 11.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF1699 PF08004.11 NODE_67589_length_235_cov_1.470000_g59648_i0forward_frame_1 - 0.018 14.8 0.9 0.022 14.5 0.8 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1699) DUF3970 PF13113.6 NODE_67587_length_235_cov_1.495000_g59646_i0forward_frame_1 - 4.2 7.7 6.5 4.5 7.6 3.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3970) DUF2102 PF09875.9 NODE_67582_length_235_cov_1.545000_g59641_i0reverse_frame_1 - 2.9 7.7 5.2 1.8 8.3 3.6 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) UPF0225 PF17775.1 NODE_67574_length_235_cov_1.600000_g59633_i0reverse_frame_1 - 0.15 12.9 0.1 0.2 12.5 0.1 1.3 1 1 0 1 1 1 0 UPF0225 domain DUF3930 PF13067.6 NODE_67572_length_235_cov_1.625000_g59631_i0reverse_frame_1 - 8.5 6.7 6.5 86 3.5 6.5 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3930) zf-CHC2 PF01807.20 NODE_67570_length_235_cov_1.645000_g59629_i0forward_frame_1 - 0.062 13.1 0.0 0.067 13.0 0.0 1.1 1 0 0 1 1 1 0 CHC2 zinc finger DUF3413 PF11893.8 NODE_67567_length_235_cov_1.685000_g59626_i0forward_frame_1 - 0.2 10.8 4.8 0.27 10.4 4.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3413) Col_cuticle_N PF01484.17 NODE_67567_length_235_cov_1.685000_g59626_i0forward_frame_1 - 0.29 11.2 5.8 0.5 10.5 5.8 1.4 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain DUF11 PF01345.18 NODE_67566_length_235_cov_1.695000_g59625_i0reverse_frame_1 - 0.075 13.3 0.7 0.087 13.1 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF11 Na_Pi_cotrans PF02690.15 NODE_67559_length_235_cov_1.795000_g59618_i0forward_frame_1 - 5.9e-06 26.4 0.2 6.4e-06 26.3 0.2 1.1 1 0 0 1 1 1 1 Na+/Pi-cotransporter Bile_Hydr_Trans PF04775.14 NODE_67556_length_235_cov_1.805000_g59615_i0forward_frame_1 - 0.12 12.5 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA thioester hydrolase/BAAT N-terminal region TIC20 PF16166.5 NODE_67555_length_235_cov_1.820000_g59614_i0forward_frame_1 - 0.082 12.7 0.2 0.093 12.5 0.2 1.1 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like DUF3267 PF11667.8 NODE_67551_length_235_cov_1.890000_g59610_i0forward_frame_1 - 0.069 13.4 0.1 0.076 13.3 0.1 1.2 1 0 0 1 1 1 0 Putative zincin peptidase Pox_F17 PF04767.12 NODE_67551_length_235_cov_1.890000_g59610_i0forward_frame_1 - 0.11 13.0 0.2 0.13 12.8 0.2 1.1 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein ACP53EA PF06313.11 NODE_67541_length_235_cov_2.075000_g59600_i0reverse_frame_1 - 0.049 13.8 0.0 0.071 13.3 0.0 1.3 1 0 0 1 1 1 0 Drosophila ACP53EA protein Ion_trans PF00520.31 NODE_67541_length_235_cov_2.075000_g59600_i0forward_frame_1 - 0.066 12.4 6.2 0.11 11.7 6.3 1.4 1 1 0 1 1 1 0 Ion transport protein Spike_rec_bind PF09408.10 NODE_67537_length_235_cov_2.180000_g59596_i0forward_frame_1 - 0.015 15.1 0.7 0.016 14.9 0.7 1.0 1 0 0 1 1 1 0 Spike receptor binding domain LZ3wCH PF18517.1 NODE_67536_length_235_cov_2.190000_g59595_i0forward_frame_1 - 0.022 14.8 0.1 0.032 14.3 0.1 1.2 1 0 0 1 1 1 0 Leucine zipper with capping helix domain CUTL PF16557.5 NODE_67535_length_235_cov_2.190000_g59594_i0forward_frame_1 - 0.13 12.5 2.7 0.24 11.6 2.6 1.6 1 1 0 1 1 1 0 CUT1-like DNA-binding domain of SATB DUF4239 PF14023.6 NODE_67532_length_235_cov_2.235000_g59591_i0forward_frame_1 - 0.6 9.8 5.5 0.71 9.6 5.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF390 PF04094.14 NODE_67531_length_235_cov_2.255000_g59590_i0reverse_frame_1 - 0.66 8.2 13.5 0.72 8.1 13.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) Rrn6 PF10214.9 NODE_67531_length_235_cov_2.255000_g59590_i0reverse_frame_1 - 4.4 5.7 9.6 4.7 5.6 9.6 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF3987 PF13148.6 NODE_67531_length_235_cov_2.255000_g59590_i0reverse_frame_1 - 8.5 5.3 13.3 9.8 5.1 13.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Borrelia_P83 PF05262.11 NODE_67531_length_235_cov_2.255000_g59590_i0reverse_frame_1 - 8.9 4.7 14.0 9.4 4.6 14.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein ZnuA PF01297.17 NODE_67522_length_235_cov_2.465000_g59581_i0forward_frame_1 - 2e-09 37.3 0.0 2e-09 37.2 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic HoxA13_N PF12284.8 NODE_67517_length_235_cov_2.600000_g59576_i0reverse_frame_1 - 0.014 16.0 0.4 0.017 15.8 0.4 1.1 1 0 0 1 1 1 0 Hox protein A13 N terminal Aldolase_II PF00596.21 NODE_67513_length_235_cov_2.765000_g59572_i0forward_frame_1 - 1.7e-15 57.4 0.5 1.9e-15 57.3 0.5 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain NAT PF04768.13 NODE_67511_length_235_cov_2.790000_g59570_i0reverse_frame_1 - 0.08 12.6 4.6 0.09 12.4 4.6 1.2 1 1 0 1 1 1 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase Guanylate_cyc PF00211.20 NODE_67504_length_235_cov_3.035000_g59563_i0reverse_frame_1 - 0.001 18.7 0.0 0.0011 18.6 0.0 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain CCER1 PF15482.6 NODE_67503_length_235_cov_3.110000_g59562_i0reverse_frame_1 - 0.3 10.9 4.4 0.32 10.8 4.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 CHDCT2 PF08074.11 NODE_67493_length_235_cov_14.980000_g59552_i0reverse_frame_1 - 0.037 14.2 0.2 0.043 14.0 0.2 1.0 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain PikAIV_N PF18605.1 NODE_67491_length_235_cov_16.110000_g59550_i0reverse_frame_1 - 1.1 8.9 5.1 0.49 10.0 2.3 1.8 2 0 0 2 2 2 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Opacity PF02462.15 NODE_67491_length_235_cov_16.110000_g59550_i0forward_frame_1 - 0.14 12.2 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Opacity family porin protein PP2C PF00481.21 NODE_67488_length_235_cov_22.110000_g59547_i0reverse_frame_1 - 8.6e-07 28.8 0.0 1e-06 28.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DUF2572 PF10833.8 NODE_67484_length_235_cov_28.490000_g59543_i0reverse_frame_1 - 0.0022 17.8 3.4 0.0025 17.6 3.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2572) DUF2208 PF09973.9 NODE_67484_length_235_cov_28.490000_g59543_i0forward_frame_1 - 4.2 6.9 11.2 4.5 6.8 11.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) Neurokinin_B PF03823.14 NODE_67478_length_235_cov_37.610000_g59537_i0reverse_frame_1 - 0.0018 18.3 0.2 0.003 17.6 0.2 1.4 1 0 0 1 1 1 1 Neurokinin B DUF2890 PF11081.8 NODE_67475_length_235_cov_41.880000_g59534_i0forward_frame_1 - 0.031 14.4 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) PilW PF16074.5 NODE_67465_length_235_cov_47.445000_g59524_i0reverse_frame_1 - 0.11 12.4 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Type IV Pilus-assembly protein W DUF2809 PF10990.8 NODE_67462_length_235_cov_48.750000_g59521_i0reverse_frame_1 - 0.12 13.1 0.0 19 6.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2809) TMEM208_SND2 PF05620.11 NODE_67461_length_235_cov_50.875000_g59520_i0forward_frame_1 - 0.12 12.2 0.6 0.14 11.9 0.6 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 Enterotoxin_b PF01376.18 NODE_67458_length_235_cov_55.750000_g59517_i0reverse_frame_1 - 0.055 13.7 0.0 0.057 13.6 0.0 1.2 1 0 0 1 1 1 0 Heat-labile enterotoxin beta chain Arif-1 PF06770.11 NODE_67457_length_235_cov_57.195000_g59516_i0reverse_frame_1 - 0.15 11.7 0.1 0.16 11.6 0.1 1.0 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) DUF2771 PF10969.8 NODE_67455_length_235_cov_62.260000_g59514_i0reverse_frame_1 - 0.16 12.0 0.1 0.18 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2771) Wza_C PF18412.1 NODE_67454_length_235_cov_62.570000_g59513_i0forward_frame_1 - 0.19 11.5 0.2 0.27 11.0 0.2 1.3 1 0 0 1 1 1 0 Outer-membrane lipoprotein Wza C-terminal domain TBP PF00352.21 NODE_67447_length_235_cov_73.595000_g59506_i0forward_frame_1 - 0.17 11.9 0.1 0.27 11.2 0.1 1.4 1 1 0 1 1 1 0 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3343 PF11823.8 NODE_67446_length_235_cov_73.975000_g59505_i0forward_frame_1 - 0.094 12.2 0.1 0.11 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) Pex24p PF06398.11 NODE_67441_length_235_cov_82.480000_g59500_i0forward_frame_1 - 0.04 12.9 5.5 0.02 13.9 4.1 1.3 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF334 PF03904.13 NODE_67441_length_235_cov_82.480000_g59500_i0forward_frame_1 - 1.7 8.1 4.8 1.8 8.1 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) UCH PF00443.29 NODE_67430_length_235_cov_132.600000_g59489_i0reverse_frame_1 - 5.9e-12 45.6 0.5 7.6e-12 45.3 0.5 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF5436 PF17504.2 NODE_67427_length_235_cov_198.665000_g59486_i0forward_frame_1 - 2.9 8.3 5.1 1.2 9.5 0.4 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5436) M-factor PF03855.13 NODE_67418_length_235_cov_935.810000_g59477_i0forward_frame_1 - 0.045 13.9 0.1 0.075 13.2 0.1 1.3 1 0 0 1 1 1 0 M-factor Zn-ribbon_8 PF09723.10 NODE_67417_length_235_cov_1384.785000_g59476_i0reverse_frame_1 - 0.023 14.8 1.8 4.5 7.5 0.0 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2_3 PF13878.6 NODE_67417_length_235_cov_1384.785000_g59476_i0reverse_frame_1 - 0.15 11.9 2.3 3.7 7.5 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zinc_ribbon_9 PF14369.6 NODE_67417_length_235_cov_1384.785000_g59476_i0reverse_frame_1 - 0.17 12.1 3.5 4.1 7.7 0.7 2.3 2 0 0 2 2 2 0 zinc-ribbon zf-RING_2 PF13639.6 NODE_67417_length_235_cov_1384.785000_g59476_i0reverse_frame_1 - 4.3 7.7 8.8 15 6.1 2.6 2.2 2 0 0 2 2 2 0 Ring finger domain OrfB_Zn_ribbon PF07282.11 NODE_67417_length_235_cov_1384.785000_g59476_i0reverse_frame_1 - 6.6 6.7 7.3 13 5.8 7.3 1.6 1 1 0 1 1 1 0 Putative transposase DNA-binding domain DUF1108 PF06531.11 NODE_67411_length_236_cov_0.990050_g59470_i0forward_frame_1 - 0.07 13.4 1.8 0.081 13.2 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1108) TMEM247 PF15444.6 NODE_67409_length_236_cov_0.995025_g59468_i0reverse_frame_1 - 3 7.8 4.8 3.5 7.6 4.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 Death_2 PF14786.6 NODE_67407_length_236_cov_1.094527_g59466_i0forward_frame_1 - 0.023 14.6 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 Tube Death domain DUF4337 PF14235.6 NODE_67402_length_236_cov_1.174129_g59461_i0reverse_frame_1 - 0.067 13.3 0.9 0.08 13.1 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Antimicrobial_6 PF08036.11 NODE_67401_length_236_cov_1.179104_g59460_i0forward_frame_1 - 0.035 14.2 3.0 0.11 12.6 0.4 2.2 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks304.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks304.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks304.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks304.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PIF3 PF05006.12 NODE_67399_length_236_cov_1.189055_g59458_i0forward_frame_1 - 0.066 13.3 0.2 0.08 13.0 0.2 1.1 1 0 0 1 1 1 0 Per os infectivity factor 3 AAA_lid_1 PF17857.1 NODE_67391_length_236_cov_1.223881_g59450_i0reverse_frame_1 - 5.1e-06 26.6 0.0 6.1e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 AAA+ lid domain SusD_RagB PF07980.11 NODE_67388_length_236_cov_1.248756_g59447_i0forward_frame_1 - 0.1 12.2 0.1 0.11 12.1 0.1 1.0 1 0 0 1 1 1 0 SusD family MIF4G PF02854.19 NODE_67387_length_236_cov_1.268657_g59446_i0reverse_frame_1 - 5.8e-06 26.1 0.1 7e-06 25.8 0.1 1.0 1 0 0 1 1 1 1 MIF4G domain MutL PF13941.6 NODE_67387_length_236_cov_1.268657_g59446_i0reverse_frame_1 - 0.04 12.5 0.0 0.042 12.4 0.0 1.0 1 0 0 1 1 1 0 MutL protein ArAE_1_C PF11728.8 NODE_67387_length_236_cov_1.268657_g59446_i0forward_frame_1 - 0.094 12.7 0.0 0.11 12.5 0.0 1.0 1 0 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain PRY PF13765.6 NODE_67384_length_236_cov_1.308458_g59443_i0reverse_frame_1 - 0.053 13.2 0.1 0.11 12.2 0.1 1.4 1 0 0 1 1 1 0 SPRY-associated domain Flavi_propep PF01570.17 NODE_67383_length_236_cov_1.318408_g59442_i0forward_frame_1 - 0.035 14.1 0.2 0.035 14.1 0.2 1.6 2 0 0 2 2 2 0 Flavivirus polyprotein propeptide Dynactin_p22 PF07426.11 NODE_67379_length_236_cov_1.358209_g59438_i0forward_frame_1 - 0.012 15.5 1.2 0.015 15.1 1.2 1.1 1 0 0 1 1 1 0 Dynactin subunit p22 DUF5505 PF17610.2 NODE_67378_length_236_cov_1.368159_g59437_i0reverse_frame_1 - 0.0041 17.1 0.0 0.0043 17.1 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5505) Spc7 PF08317.11 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.001 18.0 5.9 0.001 18.0 5.9 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein KASH_CCD PF14662.6 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.011 15.6 6.4 0.011 15.5 6.4 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH HrpB7 PF09486.10 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.011 16.2 1.5 0.036 14.4 1.2 1.5 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) DUF4201 PF13870.6 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.011 15.5 8.1 0.012 15.4 8.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) Fez1 PF06818.15 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.011 16.1 4.0 0.012 16.1 4.0 1.1 1 0 0 1 1 1 0 Fez1 DUF3552 PF12072.8 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.023 14.1 6.5 0.025 14.0 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TPR_MLP1_2 PF07926.12 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.028 14.5 7.5 0.046 13.8 7.5 1.4 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein KxDL PF10241.9 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.037 14.3 4.5 0.037 14.3 3.0 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein DUF745 PF05335.13 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.051 13.3 4.4 0.059 13.1 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) HNOBA PF07701.14 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.071 12.5 2.2 0.074 12.5 2.2 1.3 1 0 0 1 1 1 0 Heme NO binding associated DUF1664 PF07889.12 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.092 12.8 4.1 0.12 12.4 4.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) CRF PF00473.17 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.093 12.8 0.1 0.18 11.9 0.1 1.5 1 0 0 1 1 1 0 Corticotropin-releasing factor family Exonuc_VII_L PF02601.15 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.13 11.8 3.4 0.12 11.9 3.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF948 PF06103.11 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.15 12.3 4.4 0.19 12.0 4.4 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) UPF0184 PF03670.13 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.16 12.4 3.8 0.29 11.5 3.1 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) DUF4407 PF14362.6 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.32 10.3 3.0 0.33 10.3 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) JIP_LZII PF16471.5 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.63 10.2 10.4 0.97 9.7 4.5 2.6 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II DivIC PF04977.15 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 5.9 6.7 6.9 29 4.5 6.9 1.9 1 1 0 1 1 1 0 Septum formation initiator Npa1 PF11707.8 NODE_67370_length_236_cov_1.467662_g59429_i0reverse_frame_1 - 0.02 14.2 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal GED PF02212.18 NODE_67364_length_236_cov_1.522388_g59423_i0forward_frame_1 - 0.12 12.5 2.0 0.16 12.2 2.0 1.2 1 0 0 1 1 1 0 Dynamin GTPase effector domain BRI3BP PF14965.6 NODE_67363_length_236_cov_1.527363_g59422_i0forward_frame_1 - 0.0056 16.2 0.2 0.0069 15.9 0.2 1.1 1 0 0 1 1 1 1 Negative regulator of p53/TP53 PP2C PF00481.21 NODE_67356_length_236_cov_1.582090_g59415_i0forward_frame_1 - 2.1e-08 34.2 0.1 2.2e-08 34.0 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DEAD PF00270.29 NODE_67355_length_236_cov_1.587065_g59414_i0forward_frame_1 - 1.8e-08 34.3 0.1 2.3e-08 34.0 0.1 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase SspP PF08179.12 NODE_67353_length_236_cov_1.592040_g59412_i0reverse_frame_1 - 0.016 15.6 3.9 0.31 11.5 0.3 2.2 2 0 0 2 2 2 0 Small acid-soluble spore protein P family EamA PF00892.20 NODE_67347_length_236_cov_1.616915_g59406_i0forward_frame_1 - 0.0067 16.6 2.7 0.008 16.4 2.7 1.1 1 0 0 1 1 1 1 EamA-like transporter family Copine PF07002.16 NODE_67341_length_236_cov_1.691542_g59400_i0forward_frame_1 - 1.5e-15 57.3 0.0 1.6e-15 57.2 0.0 1.0 1 0 0 1 1 1 1 Copine DUF4636 PF15468.6 NODE_67339_length_236_cov_1.711443_g59398_i0forward_frame_1 - 0.019 14.7 0.7 0.02 14.6 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) Pkinase PF00069.25 NODE_67333_length_236_cov_1.766169_g59392_i0forward_frame_1 - 2.1e-16 60.1 0.0 2.4e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67333_length_236_cov_1.766169_g59392_i0forward_frame_1 - 5.9e-08 32.3 0.0 1.3e-07 31.2 0.0 1.5 1 1 0 1 1 1 1 Protein tyrosine kinase MID_pPIWI_RE PF18157.1 NODE_67331_length_236_cov_1.781095_g59390_i0forward_frame_1 - 0.039 14.3 0.3 0.041 14.2 0.3 1.1 1 0 0 1 1 1 0 MID domain of pPIWI_RE VP9 PF09625.10 NODE_67327_length_236_cov_1.845771_g59386_i0forward_frame_1 - 0.098 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 VP9 protein YbfN PF13982.6 NODE_67312_length_236_cov_2.019900_g59371_i0reverse_frame_1 - 0.067 13.5 0.1 0.085 13.1 0.1 1.1 1 0 0 1 1 1 0 YbfN-like lipoprotein INSC_LBD PF16748.5 NODE_67311_length_236_cov_2.039801_g59370_i0reverse_frame_1 - 0.08 12.4 3.7 0.3 10.6 0.4 2.2 1 1 1 2 2 2 0 Inscuteable LGN-binding domain Tad PF13400.6 NODE_67302_length_236_cov_2.363184_g59361_i0forward_frame_1 - 5.6 7.4 0.0 5.6 7.4 0.0 3.1 3 0 0 3 3 3 0 Putative Flp pilus-assembly TadE/G-like Wzy_C PF04932.15 NODE_67302_length_236_cov_2.363184_g59361_i0forward_frame_1 - 5.7 6.6 9.3 3.3 7.3 6.3 1.8 2 0 0 2 2 2 0 O-Antigen ligase Imm58 PF15581.6 NODE_67300_length_236_cov_2.368159_g59359_i0reverse_frame_1 - 0.085 13.0 0.0 0.099 12.7 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 58 WT1 PF02165.15 NODE_67299_length_236_cov_2.402985_g59358_i0reverse_frame_1 - 0.01 15.1 0.1 0.012 14.8 0.1 1.1 1 0 0 1 1 1 0 Wilm's tumour protein Ndc1_Nup PF09531.10 NODE_67295_length_236_cov_2.482587_g59354_i0forward_frame_1 - 2.4 6.8 7.4 2.7 6.6 7.4 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Exo_endo_phos_2 PF14529.6 NODE_67292_length_236_cov_2.532338_g59351_i0reverse_frame_1 - 0.052 13.4 0.0 0.062 13.2 0.0 1.1 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Orbi_VP7 PF00897.17 NODE_67292_length_236_cov_2.532338_g59351_i0reverse_frame_1 - 0.06 12.3 0.0 0.065 12.2 0.0 1.0 1 0 0 1 1 1 0 Orbivirus inner capsid protein VP7 Nrf1_DNA-bind PF10491.9 NODE_67292_length_236_cov_2.532338_g59351_i0reverse_frame_1 - 0.073 12.8 0.0 0.086 12.5 0.0 1.2 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 Prok-RING_2 PF14445.6 NODE_67292_length_236_cov_2.532338_g59351_i0forward_frame_1 - 0.14 12.4 2.2 6.8 6.9 0.2 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 2 CTV_P23 PF04808.12 NODE_67291_length_236_cov_2.532338_g59350_i0reverse_frame_1 - 0.065 12.8 0.0 0.068 12.7 0.0 1.1 1 0 0 1 1 1 0 Citrus tristeza virus (CTV) P23 protein Aldedh PF00171.22 NODE_67287_length_236_cov_2.572139_g59346_i0reverse_frame_1 - 0.045 12.3 0.1 0.048 12.2 0.1 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family zf_C2H2_10 PF18414.1 NODE_67286_length_236_cov_2.621891_g59345_i0forward_frame_1 - 0.11 12.1 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger SPATA9 PF15824.5 NODE_67281_length_236_cov_2.786070_g59340_i0reverse_frame_1 - 0.023 14.0 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 9 Cytochrome_CBB3 PF13442.6 NODE_67280_length_236_cov_2.855721_g59339_i0reverse_frame_1 - 0.024 15.0 0.0 0.027 14.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III UNC119_bdg PF15435.6 NODE_67280_length_236_cov_2.855721_g59339_i0forward_frame_1 - 0.0022 17.6 1.3 0.0023 17.5 1.0 1.3 1 1 0 1 1 1 1 UNC119-binding protein C5orf30 homologue DUF2374 PF09574.10 NODE_67279_length_236_cov_2.890547_g59338_i0reverse_frame_1 - 0.25 11.2 0.2 0.25 11.2 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (Duf2374) DUF72 PF01904.18 NODE_67279_length_236_cov_2.890547_g59338_i0forward_frame_1 - 1e-07 32.3 0.0 1.2e-07 32.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 Fanconi_C PF02106.15 NODE_67279_length_236_cov_2.890547_g59338_i0forward_frame_1 - 0.063 12.0 0.3 0.08 11.6 0.3 1.1 1 0 0 1 1 1 0 Fanconi anaemia group C protein Secretin_N PF03958.17 NODE_67278_length_236_cov_2.925373_g59337_i0forward_frame_1 - 0.094 13.1 0.1 0.12 12.8 0.1 1.1 1 0 0 1 1 1 0 Bacterial type II/III secretion system short domain Lamprin PF06403.11 NODE_67274_length_236_cov_3.318408_g59333_i0reverse_frame_1 - 0.0035 17.3 0.1 0.0042 17.1 0.1 1.1 1 0 0 1 1 1 1 Lamprin Pkinase_Tyr PF07714.17 NODE_67269_length_236_cov_3.482587_g59328_i0forward_frame_1 - 0.00065 19.1 0.0 0.00075 18.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_67269_length_236_cov_3.482587_g59328_i0forward_frame_1 - 0.027 13.8 0.0 0.029 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Cyclophil_like PF04126.13 NODE_67267_length_236_cov_3.582090_g59326_i0forward_frame_1 - 0.2 11.5 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Cyclophilin-like Wzy_C_2 PF11846.8 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 0.95 9.4 5.9 0.53 10.2 4.1 1.5 1 1 1 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal Papilloma_E5A PF05776.12 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 1.7 9.0 22.2 2 8.8 22.2 1.1 1 0 0 1 1 1 0 Papillomavirus E5A protein Shisa PF13908.6 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 3.5 7.8 12.1 4.2 7.6 12.1 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Amnionless PF14828.6 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 4.4 6.0 9.8 5.4 5.7 9.8 1.2 1 0 0 1 1 1 0 Amnionless m04gp34like PF12216.8 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 7.5 6.0 16.0 19 4.7 16.0 1.6 1 1 0 1 1 1 0 Immune evasion protein RIFIN PF02009.16 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 0.026 14.4 0.4 0.026 14.4 0.4 1.0 1 0 0 1 1 1 0 Rifin PMT_2 PF13231.6 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 0.2 11.8 8.0 0.24 11.6 8.0 1.0 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Amnionless PF14828.6 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 0.43 9.3 0.9 0.48 9.2 0.9 1.0 1 0 0 1 1 1 0 Amnionless DUF5305 PF17231.2 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 0.59 9.5 7.3 0.61 9.4 7.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) AJAP1_PANP_C PF15298.6 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 0.83 9.8 16.8 0.88 9.8 16.8 1.2 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF508 PF04370.12 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 1 9.1 5.9 1.1 9.0 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF508) BSP_II PF05432.11 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 3.1 7.4 13.7 3.5 7.2 13.7 1.0 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) Tra_M PF05261.11 NODE_67244_length_236_cov_48.656716_g59303_i0forward_frame_1 - 0.05 13.6 0.0 0.059 13.3 0.0 1.1 1 0 0 1 1 1 0 TraM protein, DNA-binding zf-RING_2 PF13639.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 3.5e-07 30.5 2.1 3.5e-07 30.5 2.1 1.4 1 1 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.00013 22.2 5.1 0.00069 19.8 5.1 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.00018 21.5 1.0 0.00018 21.5 1.0 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.00034 20.7 3.8 0.0011 19.1 3.7 2.0 1 1 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.00062 19.8 1.2 0.00086 19.4 0.8 1.4 1 1 0 1 1 1 1 RING-variant domain zf-RING_11 PF17123.5 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.00087 19.0 0.9 0.0022 17.7 0.9 1.7 1 1 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.0018 18.1 2.3 0.0032 17.3 1.9 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.029 14.0 1.4 0.042 13.5 1.4 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.061 13.2 2.0 0.13 12.2 2.0 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_5 PF17121.5 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.16 11.8 3.6 0.16 11.8 1.7 1.9 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF1610 PF07754.11 NODE_67240_length_236_cov_55.417910_g59299_i0reverse_frame_1 - 0.0067 16.4 0.3 0.014 15.3 0.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1610) Dynein_AAA_lid PF17852.1 NODE_67239_length_236_cov_56.393035_g59298_i0reverse_frame_1 - 8e-15 55.1 0.1 9.1e-15 54.9 0.1 1.0 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain IL32 PF15225.6 NODE_67235_length_236_cov_59.154229_g59294_i0reverse_frame_1 - 0.05 14.0 0.2 0.055 13.8 0.2 1.2 1 0 0 1 1 1 0 Interleukin 32 Ndufs5 PF10200.9 NODE_67229_length_236_cov_67.855721_g59288_i0reverse_frame_1 - 0.031 14.5 0.0 0.037 14.3 0.0 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa DUF2628 PF10947.8 NODE_67225_length_236_cov_84.398010_g59284_i0forward_frame_1 - 0.0085 16.4 0.5 0.01 16.2 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2628) Na_sulph_symp PF00939.19 NODE_67225_length_236_cov_84.398010_g59284_i0forward_frame_1 - 0.035 13.2 5.6 0.038 13.0 5.6 1.0 1 0 0 1 1 1 0 Sodium:sulfate symporter transmembrane region V-set_2 PF15910.5 NODE_67222_length_236_cov_91.502488_g59281_i0forward_frame_1 - 0.035 14.2 0.6 0.039 14.0 0.6 1.2 1 0 0 1 1 1 0 ICOS V-set domain RMI1_C PF16099.5 NODE_67222_length_236_cov_91.502488_g59281_i0forward_frame_1 - 0.092 12.6 0.1 0.098 12.5 0.1 1.1 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold DUF2148 PF09918.9 NODE_67217_length_236_cov_129.781095_g59276_i0forward_frame_1 - 0.0036 17.3 0.0 8.7 6.5 0.0 3.1 2 1 1 3 3 3 3 Uncharacterized protein containing a ferredoxin domain (DUF2148) DUF2863 PF11062.8 NODE_67216_length_236_cov_131.885572_g59275_i0forward_frame_1 - 0.038 12.4 0.0 0.043 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2863) DUF1068 PF06364.12 NODE_67212_length_236_cov_191.164179_g59271_i0forward_frame_1 - 0.015 15.2 0.5 0.016 15.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) DUF1652 PF07865.11 NODE_67212_length_236_cov_191.164179_g59271_i0forward_frame_1 - 0.094 12.6 0.4 0.12 12.2 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) EVC2_like PF12297.8 NODE_67208_length_236_cov_318.895522_g59267_i0forward_frame_1 - 2.3 6.8 3.9 2.3 6.8 3.9 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Med8 PF10232.9 NODE_67205_length_236_cov_349.398010_g59264_i0forward_frame_1 - 0.058 13.0 2.1 0.07 12.7 2.1 1.1 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 GspL_C PF12693.7 NODE_67205_length_236_cov_349.398010_g59264_i0forward_frame_1 - 0.35 10.7 5.1 0.39 10.5 5.1 1.1 1 0 0 1 1 1 0 GspL periplasmic domain NdhL PF10716.9 NODE_67201_length_237_cov_0.787129_g59260_i0reverse_frame_1 - 0.053 13.5 1.0 0.074 13.0 1.0 1.2 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit DUF3578 PF12102.8 NODE_67196_length_237_cov_0.900990_g59255_i0reverse_frame_1 - 0.043 13.4 0.6 0.051 13.1 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3578) TSC22 PF01166.18 NODE_67191_length_237_cov_0.990099_g59250_i0reverse_frame_1 - 0.065 13.5 0.2 0.29 11.5 0.1 1.9 1 1 1 2 2 2 0 TSC-22/dip/bun family LepB_GAP_N PF18172.1 NODE_67190_length_237_cov_0.990099_g59249_i0reverse_frame_1 - 0.0073 16.2 0.1 0.0082 16.1 0.1 1.0 1 0 0 1 1 1 1 LepB GAP domain N-terminal subdomain Phage_GPA PF05840.13 NODE_67188_length_237_cov_1.049505_g59247_i0forward_frame_1 - 0.011 14.8 0.1 0.012 14.8 0.1 1.0 1 0 0 1 1 1 0 Bacteriophage replication gene A protein (GPA) ERF PF04404.12 NODE_67188_length_237_cov_1.049505_g59247_i0forward_frame_1 - 0.044 13.6 0.2 0.054 13.3 0.2 1.1 1 0 0 1 1 1 0 ERF superfamily zf-C2H2_8 PF15909.5 NODE_67188_length_237_cov_1.049505_g59247_i0forward_frame_1 - 0.13 12.6 1.2 0.14 12.4 0.9 1.4 1 1 0 1 1 1 0 C2H2-type zinc ribbon DUF1580 PF07618.11 NODE_67187_length_237_cov_1.049505_g59246_i0forward_frame_1 - 0.078 12.6 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) Promethin PF16015.5 NODE_67182_length_237_cov_1.108911_g59241_i0reverse_frame_1 - 2.3 8.2 14.2 2.6 8.0 14.2 1.1 1 0 0 1 1 1 0 Promethin B12D PF06522.11 NODE_67175_length_237_cov_1.183168_g59234_i0reverse_frame_1 - 0.025 14.4 2.0 0.036 13.8 2.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit SLBP_RNA_bind PF15247.6 NODE_67164_length_237_cov_1.227723_g59223_i0reverse_frame_1 - 0.21 11.7 1.7 0.33 11.1 0.3 1.8 2 0 0 2 2 2 0 Histone RNA hairpin-binding protein RNA-binding domain Thioredoxin_9 PF14595.6 NODE_67164_length_237_cov_1.227723_g59223_i0forward_frame_1 - 0.16 11.7 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin Pox_F17 PF04767.12 NODE_67161_length_237_cov_1.306931_g59220_i0reverse_frame_1 - 2.2 8.9 6.6 11 6.5 2.7 2.0 1 1 1 2 2 2 0 DNA-binding 11 kDa phosphoprotein DUF3370 PF11850.8 NODE_67160_length_237_cov_1.306931_g59219_i0reverse_frame_1 - 0.22 10.3 0.1 0.25 10.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3370) Lamprin PF06403.11 NODE_67159_length_237_cov_1.311881_g59218_i0forward_frame_1 - 0.16 11.9 1.1 0.2 11.6 1.1 1.1 1 0 0 1 1 1 0 Lamprin MCM PF00493.23 NODE_67154_length_237_cov_1.386139_g59213_i0reverse_frame_1 - 3e-39 134.5 0.2 3.2e-39 134.4 0.2 1.0 1 0 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 NODE_67154_length_237_cov_1.386139_g59213_i0reverse_frame_1 - 1.6e-05 24.4 0.0 1.7e-05 24.3 0.0 1.0 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 NODE_67154_length_237_cov_1.386139_g59213_i0reverse_frame_1 - 0.0074 16.1 0.0 0.0083 16.0 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 NODE_67154_length_237_cov_1.386139_g59213_i0reverse_frame_1 - 0.0076 16.3 0.0 0.0092 16.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) PEARLI-4 PF05278.12 NODE_67149_length_237_cov_1.425743_g59208_i0reverse_frame_1 - 0.019 14.5 0.1 0.019 14.5 0.1 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) Histone_H2A_C PF16211.5 NODE_67143_length_237_cov_1.470297_g59202_i0reverse_frame_1 - 0.056 13.2 0.3 0.092 12.5 0.1 1.5 2 0 0 2 2 2 0 C-terminus of histone H2A Ribosomal_S17_N PF16205.5 NODE_67140_length_237_cov_1.534653_g59199_i0forward_frame_1 - 0.12 12.7 0.4 1.2 9.6 0.0 2.0 1 1 1 2 2 2 0 Ribosomal_S17 N-terminal Pkinase PF00069.25 NODE_67134_length_237_cov_1.569307_g59193_i0reverse_frame_1 - 7.6e-06 25.5 0.0 7.8e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain FtsK_4TM PF13491.6 NODE_67133_length_237_cov_1.569307_g59192_i0forward_frame_1 - 5.8e-08 32.6 0.4 6.8e-08 32.4 0.4 1.1 1 0 0 1 1 1 1 4TM region of DNA translocase FtsK/SpoIIIE HTH_11 PF08279.12 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_1 - 0.062 13.3 0.5 0.13 12.3 0.0 1.8 2 0 0 2 2 2 0 HTH domain Trp_Tyr_perm PF03222.13 NODE_67124_length_237_cov_1.712871_g59183_i0forward_frame_1 - 2e-10 40.3 1.5 2.1e-10 40.2 1.5 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Fijivirus_P9-2 PF06837.11 NODE_67114_length_237_cov_1.797030_g59173_i0forward_frame_1 - 0.19 11.1 1.1 0.22 11.0 1.1 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein Beta_helix PF13229.6 NODE_67107_length_237_cov_1.915842_g59166_i0forward_frame_1 - 0.00033 20.5 0.1 0.00035 20.5 0.1 1.1 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_67107_length_237_cov_1.915842_g59166_i0forward_frame_1 - 0.0022 17.3 0.0 0.0022 17.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Lamprin PF06403.11 NODE_67106_length_237_cov_1.940594_g59165_i0reverse_frame_1 - 0.11 12.4 5.9 0.32 11.0 5.9 1.8 1 1 0 1 1 1 0 Lamprin FAP PF07174.11 NODE_67106_length_237_cov_1.940594_g59165_i0forward_frame_1 - 1.1 8.7 10.5 1 8.7 10.5 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Phage_int_SAM_1 PF02899.17 NODE_67103_length_237_cov_1.965347_g59162_i0reverse_frame_1 - 0.023 15.0 0.0 0.028 14.7 0.0 1.1 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Pkinase PF00069.25 NODE_67101_length_237_cov_2.014851_g59160_i0reverse_frame_1 - 8.6e-15 54.8 0.5 9.7e-15 54.6 0.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67101_length_237_cov_2.014851_g59160_i0reverse_frame_1 - 2.3e-06 27.1 0.1 2.4e-06 27.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PsbH PF00737.20 NODE_67100_length_237_cov_2.054455_g59159_i0forward_frame_1 - 0.38 10.5 3.8 0.62 9.8 3.8 1.3 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein NdhL PF10716.9 NODE_67099_length_237_cov_2.059406_g59158_i0forward_frame_1 - 0.097 12.7 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit DUF2225 PF09986.9 NODE_67092_length_237_cov_2.123762_g59151_i0forward_frame_1 - 0.023 14.5 0.1 0.023 14.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) SNAD2 PF18745.1 NODE_67092_length_237_cov_2.123762_g59151_i0forward_frame_1 - 0.033 13.9 0.1 0.037 13.7 0.1 1.1 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 2 NR_Repeat PF14046.6 NODE_67089_length_237_cov_2.257426_g59148_i0reverse_frame_1 - 0.055 13.6 0.5 0.083 13.0 0.5 1.3 1 0 0 1 1 1 0 Nuclear receptor repeat TRP PF06011.12 NODE_67081_length_237_cov_2.747525_g59140_i0reverse_frame_1 - 0.13 11.0 8.3 0.15 10.8 8.3 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Pescadillo_N PF06732.11 NODE_67072_length_237_cov_3.163366_g59131_i0reverse_frame_1 - 0.092 12.3 0.1 0.1 12.1 0.1 1.0 1 0 0 1 1 1 0 Pescadillo N-terminus DUF5357 PF17310.2 NODE_67047_length_237_cov_48.504950_g59106_i0reverse_frame_1 - 0.046 12.3 0.0 0.049 12.2 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) DUF2218 PF09981.9 NODE_67026_length_237_cov_88.757426_g59085_i0forward_frame_1 - 0.059 13.8 0.1 0.07 13.5 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2218) DUF2972 PF11186.8 NODE_67022_length_237_cov_104.594059_g59081_i0reverse_frame_1 - 0.0064 16.4 1.1 0.0065 16.4 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2972) Not1 PF04054.15 NODE_67022_length_237_cov_104.594059_g59081_i0reverse_frame_1 - 0.056 12.4 1.1 0.058 12.3 1.1 1.0 1 0 0 1 1 1 0 CCR4-Not complex component, Not1 Phi-29_GP4 PF05464.11 NODE_67022_length_237_cov_104.594059_g59081_i0reverse_frame_1 - 0.085 13.1 0.1 0.097 12.9 0.1 1.1 1 0 0 1 1 1 0 Phi-29-like late genes activator (early protein GP4) BT1 PF03092.16 NODE_67022_length_237_cov_104.594059_g59081_i0reverse_frame_1 - 0.088 11.0 0.5 0.091 11.0 0.5 1.0 1 0 0 1 1 1 0 BT1 family Antiterm PF03589.13 NODE_67021_length_237_cov_110.381188_g59080_i0forward_frame_1 - 0.055 13.8 0.0 0.077 13.3 0.0 1.2 1 0 0 1 1 1 0 Antitermination protein zf-CCCH_3 PF15663.5 NODE_67016_length_237_cov_134.306931_g59075_i0forward_frame_1 - 0.044 14.0 2.3 0.062 13.5 2.3 1.3 1 0 0 1 1 1 0 Zinc-finger containing family DUF678 PF05077.12 NODE_67011_length_237_cov_249.247525_g59070_i0reverse_frame_1 - 0.19 11.9 0.6 0.19 11.9 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF678) zf-RING_5 PF14634.6 NODE_67005_length_237_cov_474.306931_g59064_i0forward_frame_1 - 0.068 13.1 0.4 0.11 12.5 0.4 1.3 1 0 0 1 1 1 0 zinc-RING finger domain Cript PF10235.9 NODE_67000_length_238_cov_0.788177_g59059_i0reverse_frame_2 - 0.062 13.9 0.8 0.071 13.7 0.8 1.2 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT zf-C6H2 PF15801.5 NODE_66998_length_238_cov_0.871921_g59057_i0reverse_frame_2 - 0.12 12.7 4.6 0.27 11.6 0.6 2.6 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding PAC4 PF16093.5 NODE_66997_length_238_cov_0.886700_g59056_i0reverse_frame_3 - 0.49 10.6 10.0 2.4e+02 2.0 9.9 2.9 1 1 0 1 1 1 0 Proteasome assembly chaperone 4 PRP38_assoc PF12871.7 NODE_66997_length_238_cov_0.886700_g59056_i0reverse_frame_2 - 0.026 15.1 18.8 0.026 15.1 18.8 1.8 1 1 1 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Auts2 PF15336.6 NODE_66997_length_238_cov_0.886700_g59056_i0reverse_frame_2 - 2.1 8.4 10.4 2.5 8.1 10.4 1.2 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Transthyretin PF00576.21 NODE_66996_length_238_cov_0.916256_g59055_i0forward_frame_3 - 0.14 12.8 3.7 0.26 12.0 3.7 1.4 1 0 0 1 1 1 0 HIUase/Transthyretin family Apq12 PF12716.7 NODE_66994_length_238_cov_0.980296_g59053_i0reverse_frame_2 - 0.14 12.2 0.1 0.14 12.2 0.1 1.4 2 0 0 2 2 2 0 Nuclear pore assembly and biogenesis zf-SAP30 PF13866.6 NODE_66990_length_238_cov_1.172414_g59049_i0reverse_frame_3 - 0.5 10.5 2.4 10 6.3 0.3 2.4 1 1 1 2 2 2 0 SAP30 zinc-finger zf-TRAF PF02176.18 NODE_66985_length_238_cov_1.177340_g59044_i0reverse_frame_3 - 0.021 15.5 0.4 0.049 14.3 0.1 1.8 2 0 0 2 2 2 0 TRAF-type zinc finger DUF4305 PF14146.6 NODE_66979_length_238_cov_1.187192_g59038_i0forward_frame_2 - 0.028 14.6 1.2 2.9 8.2 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4305) DUF247 PF03140.15 NODE_66977_length_238_cov_1.270936_g59036_i0forward_frame_3 - 0.023 13.9 0.0 0.024 13.9 0.0 1.0 1 0 0 1 1 1 0 Plant protein of unknown function IMPa_helical PF18642.1 NODE_66977_length_238_cov_1.270936_g59036_i0forward_frame_3 - 0.031 14.7 0.1 0.037 14.4 0.1 1.3 1 1 0 1 1 1 0 Immunomodulating metalloprotease helical domain TERB2 PF15101.6 NODE_66977_length_238_cov_1.270936_g59036_i0forward_frame_3 - 0.093 12.8 1.5 0.12 12.5 1.1 1.3 1 1 0 1 1 1 0 Telomere-associated protein TERB2 DUF1589 PF07628.11 NODE_66977_length_238_cov_1.270936_g59036_i0forward_frame_2 - 0.0042 17.2 0.1 0.0043 17.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1589) Wzy_C PF04932.15 NODE_66975_length_238_cov_1.295567_g59034_i0forward_frame_3 - 0.09 12.4 0.5 0.1 12.2 0.5 1.0 1 0 0 1 1 1 0 O-Antigen ligase DUF5338 PF17273.2 NODE_66974_length_238_cov_1.305419_g59033_i0reverse_frame_3 - 0.056 13.5 0.4 0.056 13.5 0.4 2.3 1 1 0 2 2 2 0 Family of unknown function (DUF5338) EF-hand_14 PF17959.1 NODE_66974_length_238_cov_1.305419_g59033_i0reverse_frame_3 - 0.81 10.1 3.3 1.5 9.2 3.3 1.6 1 1 0 1 1 1 0 EF-hand domain BPD_transp_2 PF02653.16 NODE_66971_length_238_cov_1.325123_g59030_i0reverse_frame_2 - 0.00098 18.4 4.1 0.0012 18.1 4.1 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component OFeT_1 PF16955.5 NODE_66971_length_238_cov_1.325123_g59030_i0forward_frame_3 - 0.077 12.7 0.0 0.091 12.4 0.0 1.1 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter Orbi_VP5 PF00901.17 NODE_66968_length_238_cov_1.374384_g59027_i0reverse_frame_3 - 0.0035 15.8 0.1 0.0035 15.8 0.1 1.1 1 0 0 1 1 1 1 Orbivirus outer capsid protein VP5 Curto_V2 PF07325.11 NODE_66968_length_238_cov_1.374384_g59027_i0reverse_frame_3 - 0.0076 16.1 0.3 0.0083 16.0 0.3 1.0 1 0 0 1 1 1 1 Curtovirus V2 protein FliD_C PF07195.12 NODE_66968_length_238_cov_1.374384_g59027_i0reverse_frame_3 - 0.017 14.5 0.1 0.02 14.4 0.1 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus MRPL52 PF18699.1 NODE_66968_length_238_cov_1.374384_g59027_i0reverse_frame_3 - 0.023 14.9 1.5 0.027 14.6 1.5 1.2 1 0 0 1 1 1 0 Mitoribosomal protein mL52 PSI_integrin PF17205.3 NODE_66968_length_238_cov_1.374384_g59027_i0forward_frame_2 - 0.037 13.8 1.5 0.24 11.2 0.4 2.1 2 0 0 2 2 2 0 Integrin plexin domain OCD_Mu_crystall PF02423.15 NODE_66958_length_238_cov_1.482759_g59017_i0reverse_frame_2 - 0.1 11.5 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family Nucleoside_tran PF01733.18 NODE_66951_length_238_cov_1.571429_g59010_i0forward_frame_3 - 0.00061 19.3 0.3 0.00066 19.2 0.3 1.1 1 0 0 1 1 1 1 Nucleoside transporter Rotamase_2 PF13145.6 NODE_66945_length_238_cov_1.591133_g59004_i0reverse_frame_2 - 0.0069 17.2 0.4 0.0069 17.2 0.4 1.4 2 0 0 2 2 2 1 PPIC-type PPIASE domain MurJ PF03023.14 NODE_66944_length_238_cov_1.605911_g59003_i0forward_frame_2 - 1.1e-22 80.3 0.3 1.2e-22 80.2 0.3 1.0 1 0 0 1 1 1 1 Lipid II flippase MurJ IFP_35_N PF07334.13 NODE_66943_length_238_cov_1.610837_g59002_i0forward_frame_2 - 0.047 13.8 0.2 0.14 12.3 0.2 1.8 1 1 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus pKID PF02173.17 NODE_66940_length_238_cov_1.635468_g58999_i0reverse_frame_2 - 0.073 12.6 0.4 0.1 12.1 0.4 1.3 1 0 0 1 1 1 0 pKID domain Peptidase_S11 PF00768.20 NODE_66939_length_238_cov_1.640394_g58998_i0reverse_frame_2 - 0.0034 16.9 0.0 0.0034 16.9 0.0 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Nab2 PF11517.8 NODE_66937_length_238_cov_1.699507_g58996_i0reverse_frame_2 - 0.19 12.1 0.0 0.22 11.8 0.0 1.1 1 0 0 1 1 1 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) PDGF_N PF04692.13 NODE_66936_length_238_cov_1.699507_g58995_i0reverse_frame_3 - 0.047 14.5 0.1 0.052 14.3 0.1 1.2 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region LRR_RI_capping PF18779.1 NODE_66930_length_238_cov_1.793103_g58989_i0forward_frame_2 - 0.015 14.9 0.1 0.024 14.3 0.1 1.3 1 0 0 1 1 1 0 Capping Ribonuclease inhibitor Leucine Rich Repeat PPR_3 PF13812.6 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 3e-07 30.4 0.1 4.2e-07 29.9 0.1 1.3 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 4.2e-07 30.1 0.0 6.1e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 PPR repeat family PPR_long PF17177.4 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 0.00023 20.6 0.0 0.00028 20.3 0.0 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP Z1 PF10593.9 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 0.049 13.1 0.1 0.063 12.8 0.1 1.1 1 0 0 1 1 1 0 Z1 domain RPN7 PF10602.9 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 0.089 12.5 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 26S proteasome subunit RPN7 DUF3091 PF11291.8 NODE_66925_length_238_cov_1.866995_g58984_i0reverse_frame_3 - 0.045 13.9 3.4 0.053 13.7 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) E2F_CC-MB PF16421.5 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.0057 17.0 3.4 0.007 16.7 3.4 1.1 1 0 0 1 1 1 1 E2F transcription factor CC-MB domain DUF2103 PF09876.9 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.016 15.2 1.1 0.019 14.9 1.1 1.3 1 1 0 1 1 1 0 Predicted metal-binding protein (DUF2103) Tox-REase-3 PF15647.6 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.028 14.7 7.9 0.047 14.0 7.9 1.5 1 1 0 1 1 1 0 Restriction endonuclease fold toxin 3 RuvX PF03652.15 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.05 14.0 1.5 0.059 13.8 1.5 1.1 1 0 0 1 1 1 0 Holliday junction resolvase Phage_min_cap2 PF06152.11 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.12 11.3 9.2 0.15 10.9 9.2 1.3 1 1 0 1 1 1 0 Phage minor capsid protein 2 Mgr1 PF08602.10 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.4 9.5 6.4 0.42 9.4 6.4 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit DUF4446 PF14584.6 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.44 10.5 6.3 0.65 10.0 6.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) FERM_M PF00373.18 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 4.6 7.7 7.0 1.8 9.0 2.2 1.9 1 1 1 2 2 2 0 FERM central domain LMBR1 PF04791.16 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 7.8 5.3 6.2 8.2 5.2 6.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Lamprin PF06403.11 NODE_66917_length_238_cov_1.940887_g58976_i0forward_frame_2 - 0.0033 17.4 1.5 0.004 17.1 1.5 1.1 1 0 0 1 1 1 1 Lamprin DUF1068 PF06364.12 NODE_66916_length_238_cov_1.985222_g58975_i0reverse_frame_2 - 0.035 14.0 0.7 0.039 13.8 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) AFOR_N PF02730.15 NODE_66915_length_238_cov_2.064039_g58974_i0reverse_frame_3 - 2.5e-17 63.4 0.0 2.9e-17 63.2 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain EPSP_synthase PF00275.20 NODE_66911_length_238_cov_2.108374_g58970_i0forward_frame_2 - 9.3e-18 64.1 0.0 1e-17 64.0 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Glucan_synthase PF02364.15 NODE_66907_length_238_cov_2.152709_g58966_i0reverse_frame_2 - 0.018 13.3 0.1 0.018 13.2 0.1 1.0 1 0 0 1 1 1 0 1,3-beta-glucan synthase component TSC22 PF01166.18 NODE_66900_length_238_cov_2.349754_g58959_i0reverse_frame_3 - 0.0067 16.7 2.4 0.01 16.2 0.2 2.1 1 1 1 2 2 2 1 TSC-22/dip/bun family Cyclin PF08613.11 NODE_66897_length_238_cov_2.512315_g58956_i0reverse_frame_2 - 3.2e-14 53.6 0.0 3.7e-14 53.4 0.0 1.0 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 NODE_66897_length_238_cov_2.512315_g58956_i0reverse_frame_2 - 7.5e-08 32.2 0.0 8.4e-08 32.0 0.0 1.0 1 0 0 1 1 1 1 Cyclin, N-terminal domain Baculo_p26 PF04766.12 NODE_66897_length_238_cov_2.512315_g58956_i0reverse_frame_2 - 0.13 11.7 0.0 0.14 11.5 0.0 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus p26 protein CD52 PF15116.6 NODE_66893_length_238_cov_2.591133_g58952_i0reverse_frame_3 - 0.14 12.3 0.2 0.23 11.5 0.2 1.3 1 0 0 1 1 1 0 CAMPATH-1 antigen PHD_Oberon PF07227.11 NODE_66893_length_238_cov_2.591133_g58952_i0forward_frame_2 - 0.041 13.8 0.8 0.047 13.6 0.8 1.1 1 0 0 1 1 1 0 PHD - plant homeodomain finger protein SMP_2 PF10144.9 NODE_66886_length_238_cov_2.753695_g58945_i0forward_frame_3 - 2.9e-26 92.0 0.1 3.1e-26 91.9 0.1 1.0 1 0 0 1 1 1 1 Bacterial virulence factor haemolysin CHASE8 PF17152.4 NODE_66886_length_238_cov_2.753695_g58945_i0forward_frame_3 - 0.00043 20.5 0.1 0.00058 20.1 0.1 1.3 1 1 0 1 1 1 1 Periplasmic sensor domain Beta_protein PF14350.6 NODE_66886_length_238_cov_2.753695_g58945_i0forward_frame_3 - 0.072 12.5 0.0 0.072 12.5 0.0 1.0 1 0 0 1 1 1 0 Beta protein Abhydrolase_1 PF00561.20 NODE_66885_length_238_cov_2.837438_g58944_i0forward_frame_2 - 0.0001 22.0 0.0 0.00011 22.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold LCAT PF02450.15 NODE_66885_length_238_cov_2.837438_g58944_i0forward_frame_2 - 0.0011 18.2 0.0 0.0012 18.0 0.0 1.0 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase Hydrolase_4 PF12146.8 NODE_66885_length_238_cov_2.837438_g58944_i0forward_frame_2 - 0.0083 15.4 0.0 0.0091 15.3 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF1749 PF08538.10 NODE_66885_length_238_cov_2.837438_g58944_i0forward_frame_2 - 0.035 13.2 0.0 0.038 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1749) TROVE PF05731.11 NODE_66884_length_238_cov_2.847291_g58943_i0forward_frame_2 - 0.078 12.0 0.8 0.08 12.0 0.8 1.0 1 0 0 1 1 1 0 TROVE domain HRDC PF00570.23 NODE_66883_length_238_cov_2.866995_g58942_i0forward_frame_3 - 0.052 13.5 0.5 0.083 12.9 0.5 1.3 1 0 0 1 1 1 0 HRDC domain DUF3360 PF11840.8 NODE_66882_length_238_cov_2.896552_g58941_i0reverse_frame_2 - 0.058 12.1 0.0 0.065 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3360) zf-rbx1 PF12678.7 NODE_66882_length_238_cov_2.896552_g58941_i0forward_frame_3 - 0.077 13.3 2.8 0.11 12.9 2.8 1.3 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_66882_length_238_cov_2.896552_g58941_i0forward_frame_3 - 0.42 10.5 4.1 0.45 10.4 3.0 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zf_RING PF16744.5 NODE_66881_length_238_cov_3.054187_g58940_i0reverse_frame_3 - 0.042 14.0 0.2 0.068 13.3 0.2 1.4 1 0 0 1 1 1 0 KIAA1045 RING finger DUF5592 PF17332.2 NODE_66881_length_238_cov_3.054187_g58940_i0reverse_frame_3 - 0.073 13.6 0.9 0.094 13.3 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5592) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks305.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks305.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks305.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks305.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RVT_2 PF07727.14 NODE_66868_length_238_cov_5.798030_g58927_i0reverse_frame_3 - 5.7e-05 22.9 0.0 6.2e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) LEAP-2 PF07359.11 NODE_66867_length_238_cov_14.049261_g58926_i0forward_frame_2 - 0.14 12.1 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) DUF3950 PF13132.6 NODE_66864_length_238_cov_24.655172_g58923_i0forward_frame_2 - 1.8 8.4 6.6 8.8 6.2 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF3950) DUF3499 PF12005.8 NODE_66861_length_238_cov_34.477833_g58920_i0reverse_frame_2 - 0.057 14.0 0.0 0.065 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3499) Herpes_LMP1 PF05297.11 NODE_66860_length_238_cov_34.896552_g58919_i0forward_frame_2 - 0.27 10.4 0.5 0.29 10.3 0.5 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) RRM_1 PF00076.22 NODE_66857_length_238_cov_39.527094_g58916_i0reverse_frame_2 - 0.0017 18.1 0.0 0.0043 16.9 0.0 1.7 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 NODE_66857_length_238_cov_39.527094_g58916_i0reverse_frame_2 - 0.029 14.2 0.0 0.039 13.8 0.0 1.2 1 0 0 1 1 1 0 Occluded RNA-recognition motif SET_assoc PF11767.8 NODE_66857_length_238_cov_39.527094_g58916_i0reverse_frame_2 - 0.029 14.0 0.0 0.039 13.6 0.0 1.2 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated DUF4280 PF14107.6 NODE_66856_length_238_cov_39.748768_g58915_i0reverse_frame_2 - 0.034 15.0 0.3 0.04 14.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4280) CPSase_sm_chain PF00988.22 NODE_66856_length_238_cov_39.748768_g58915_i0reverse_frame_2 - 0.23 11.3 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase small chain, CPSase domain GAPT PF11770.8 NODE_66855_length_238_cov_43.354680_g58914_i0forward_frame_3 - 0.0035 17.2 0.4 0.0038 17.1 0.4 1.2 1 0 0 1 1 1 1 GRB2-binding adapter (GAPT) DUF5304 PF17230.2 NODE_66851_length_238_cov_46.674877_g58910_i0reverse_frame_3 - 0.082 13.1 0.0 0.082 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5304) VKG_Carbox PF05090.14 NODE_66851_length_238_cov_46.674877_g58910_i0forward_frame_2 - 0.11 11.3 0.0 0.12 11.2 0.0 1.0 1 0 0 1 1 1 0 Vitamin K-dependent gamma-carboxylase ShK PF01549.24 NODE_66846_length_238_cov_53.458128_g58905_i0reverse_frame_2 - 0.029 14.9 3.1 0.029 14.9 3.1 2.2 2 0 0 2 2 2 0 ShK domain-like YlaH PF14036.6 NODE_66843_length_238_cov_59.689655_g58902_i0reverse_frame_2 - 0.011 16.0 1.8 0.014 15.7 1.7 1.3 1 1 0 1 1 1 0 YlaH-like protein DUF2070 PF09843.9 NODE_66839_length_238_cov_65.645320_g58898_i0forward_frame_2 - 4.8 5.4 13.2 5.4 5.2 13.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) SelB-wing_1 PF09105.10 NODE_66838_length_238_cov_66.423645_g58897_i0forward_frame_3 - 0.017 15.1 0.2 0.025 14.5 0.2 1.3 1 0 0 1 1 1 0 Elongation factor SelB, winged helix TPR_22 PF18833.1 NODE_66837_length_238_cov_67.862069_g58896_i0reverse_frame_2 - 0.026 14.7 1.4 0.037 14.2 1.4 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat JHBP PF06585.11 NODE_66836_length_238_cov_73.502463_g58895_i0reverse_frame_3 - 0.07 12.3 0.0 0.081 12.1 0.0 1.1 1 0 0 1 1 1 0 Haemolymph juvenile hormone binding protein (JHBP) Pex2_Pex12 PF04757.14 NODE_66836_length_238_cov_73.502463_g58895_i0forward_frame_3 - 0.043 13.4 0.5 0.048 13.2 0.5 1.0 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region MNSV_P7B PF06692.11 NODE_66832_length_238_cov_92.216749_g58891_i0forward_frame_2 - 2.1 8.4 9.3 0.57 10.2 5.2 2.0 2 1 0 2 2 2 0 Melon necrotic spot virus P7B protein DUF5436 PF17504.2 NODE_66822_length_238_cov_140.600985_g58881_i0reverse_frame_3 - 1.8 8.9 8.0 8.8 6.7 8.0 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5436) PH_BEACH PF14844.6 NODE_66821_length_238_cov_145.935961_g58880_i0forward_frame_3 - 1e-06 28.7 0.0 1.1e-06 28.6 0.0 1.0 1 0 0 1 1 1 1 PH domain associated with Beige/BEACH DUF1676 PF07898.13 NODE_66820_length_238_cov_151.591133_g58879_i0reverse_frame_2 - 0.023 14.8 0.4 0.023 14.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) PIRT PF15099.6 NODE_66816_length_238_cov_202.315271_g58875_i0forward_frame_3 - 0.018 14.6 0.1 0.02 14.5 0.1 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family PPDFL PF15060.6 NODE_66809_length_238_cov_76102.477833_g58868_i0forward_frame_3 - 0.081 13.5 0.1 0.1 13.1 0.1 1.1 1 0 0 1 1 1 0 Differentiation and proliferation regulator UPF0102 PF02021.17 NODE_66805_length_239_cov_0.911765_g58864_i0forward_frame_2 - 6.1e-17 61.6 0.0 7e-17 61.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 DUF234 PF03008.14 NODE_66805_length_239_cov_0.911765_g58864_i0forward_frame_2 - 0.0022 18.4 0.1 0.0027 18.1 0.1 1.4 1 1 0 1 1 1 1 Archaea bacterial proteins of unknown function NERD PF08378.11 NODE_66805_length_239_cov_0.911765_g58864_i0forward_frame_2 - 0.0099 16.3 0.0 0.011 16.2 0.0 1.1 1 0 0 1 1 1 1 Nuclease-related domain Hjc PF01870.18 NODE_66805_length_239_cov_0.911765_g58864_i0forward_frame_2 - 0.015 15.3 0.0 0.018 15.0 0.0 1.3 1 1 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) Bromo_TP PF07524.13 NODE_66804_length_239_cov_0.941176_g58863_i0reverse_frame_3 - 0.048 13.7 0.0 0.056 13.5 0.0 1.2 1 0 0 1 1 1 0 Bromodomain associated DUF5340 PF17275.2 NODE_66804_length_239_cov_0.941176_g58863_i0reverse_frame_3 - 0.1 12.7 0.1 0.13 12.4 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5340) A_deaminase PF00962.22 NODE_66803_length_239_cov_0.970588_g58862_i0reverse_frame_3 - 0.12 11.7 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Adenosine/AMP deaminase Med8 PF10232.9 NODE_66802_length_239_cov_0.980392_g58861_i0reverse_frame_2 - 0.052 13.1 0.2 0.054 13.1 0.2 1.1 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 AC_N PF16214.5 NODE_66800_length_239_cov_0.980392_g58859_i0forward_frame_2 - 2.1 7.4 4.2 2.3 7.3 4.2 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region TPR_7 PF13176.6 NODE_66796_length_239_cov_1.019608_g58855_i0reverse_frame_2 - 0.14 12.3 0.4 0.24 11.5 0.2 1.5 2 0 0 2 2 2 0 Tetratricopeptide repeat SMN PF06003.12 NODE_66793_length_239_cov_1.073529_g58852_i0forward_frame_3 - 6.8 5.9 7.8 6.7 5.9 7.8 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) zf-C3HC4 PF00097.25 NODE_66792_length_239_cov_1.083333_g58851_i0forward_frame_2 - 0.34 10.8 4.1 1.4 8.8 4.1 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Med19 PF10278.9 NODE_66789_length_239_cov_1.132353_g58848_i0reverse_frame_2 - 0.18 11.7 0.0 0.21 11.5 0.0 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 ABC_tran PF00005.27 NODE_66787_length_239_cov_1.147059_g58846_i0reverse_frame_2 - 3.3e-08 34.1 0.0 3.4e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_66787_length_239_cov_1.147059_g58846_i0reverse_frame_2 - 0.00024 21.0 0.1 0.00024 21.0 0.1 1.0 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 NODE_66787_length_239_cov_1.147059_g58846_i0reverse_frame_2 - 0.051 13.0 0.0 0.054 12.9 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Histone PF00125.24 NODE_66781_length_239_cov_1.171569_g58840_i0forward_frame_3 - 0.04 14.3 1.5 0.047 14.0 1.5 1.0 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 Mak10 PF04112.13 NODE_66772_length_239_cov_1.264706_g58831_i0reverse_frame_3 - 0.13 11.7 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Mak10 subunit, NatC N(alpha)-terminal acetyltransferase a_DG1_N2 PF18424.1 NODE_66772_length_239_cov_1.264706_g58831_i0forward_frame_2 - 0.072 13.2 0.1 0.083 13.0 0.1 1.1 1 0 0 1 1 1 0 Alpha-Dystroglycan N-terminal domain 2 Peripla_BP_4 PF13407.6 NODE_66771_length_239_cov_1.264706_g58830_i0reverse_frame_2 - 5.5e-10 39.3 0.4 5.8e-10 39.2 0.4 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Glyco_tran_WecB PF03808.13 NODE_66771_length_239_cov_1.264706_g58830_i0reverse_frame_2 - 0.029 14.3 0.0 0.033 14.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family RHD_dimer PF16179.5 NODE_66771_length_239_cov_1.264706_g58830_i0reverse_frame_2 - 0.079 13.0 0.3 0.1 12.7 0.3 1.1 1 0 0 1 1 1 0 Rel homology dimerisation domain Chlam_PMP PF02415.17 NODE_66766_length_239_cov_1.352941_g58825_i0forward_frame_2 - 0.12 12.9 0.3 0.12 12.9 0.3 4.1 2 2 2 4 4 4 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Slp PF03843.13 NODE_66762_length_239_cov_1.372549_g58821_i0reverse_frame_3 - 0.15 11.4 0.0 0.18 11.2 0.0 1.0 1 0 0 1 1 1 0 Outer membrane lipoprotein Slp family DcuC PF03606.15 NODE_66762_length_239_cov_1.372549_g58821_i0reverse_frame_2 - 0.041 12.4 0.0 0.041 12.3 0.0 1.0 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier DUF2418 PF10332.9 NODE_66757_length_239_cov_1.421569_g58816_i0forward_frame_2 - 1.5 9.4 4.7 1.8 9.2 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) ERK-JNK_inhib PF15002.6 NODE_66755_length_239_cov_1.431373_g58814_i0forward_frame_3 - 0.0062 16.3 1.7 0.0068 16.1 1.7 1.0 1 0 0 1 1 1 1 ERK and JNK pathways, inhibitor RSN1_7TM PF02714.15 NODE_66755_length_239_cov_1.431373_g58814_i0forward_frame_3 - 0.039 13.3 0.1 0.041 13.2 0.1 1.1 1 0 0 1 1 1 0 Calcium-dependent channel, 7TM region, putative phosphate Rpp20 PF12328.8 NODE_66754_length_239_cov_1.441176_g58813_i0forward_frame_3 - 0.0084 16.1 0.0 0.0097 15.9 0.0 1.0 1 0 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P Lamprin PF06403.11 NODE_66752_length_239_cov_1.450980_g58811_i0reverse_frame_3 - 0.017 15.1 0.7 0.018 15.0 0.7 1.1 1 0 0 1 1 1 0 Lamprin RBR PF17208.3 NODE_66751_length_239_cov_1.450980_g58810_i0reverse_frame_3 - 0.044 14.5 10.7 0.044 14.5 10.7 2.2 1 1 1 2 2 2 0 RNA binding Region DDE_5 PF13546.6 NODE_66751_length_239_cov_1.450980_g58810_i0reverse_frame_3 - 0.6 9.4 7.2 0.67 9.2 7.2 1.2 1 0 0 1 1 1 0 DDE superfamily endonuclease Metallophos PF00149.28 NODE_66745_length_239_cov_1.509804_g58804_i0forward_frame_2 - 1.6e-05 25.5 0.0 1.8e-05 25.4 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Pentaxin PF00354.17 NODE_66744_length_239_cov_1.514706_g58803_i0forward_frame_2 - 0.076 12.7 0.6 1.2 8.7 0.0 2.0 1 1 1 2 2 2 0 Pentaxin family APG6_N PF17675.1 NODE_66743_length_239_cov_1.529412_g58802_i0reverse_frame_2 - 0.019 15.5 1.5 0.022 15.3 1.5 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Metal_resist PF13801.6 NODE_66743_length_239_cov_1.529412_g58802_i0reverse_frame_2 - 0.041 14.1 4.9 0.047 13.9 4.9 1.1 1 0 0 1 1 1 0 Heavy-metal resistance WD40 PF00400.32 NODE_66741_length_239_cov_1.563725_g58800_i0forward_frame_3 - 9.9e-06 26.2 0.3 0.046 14.6 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat EamA PF00892.20 NODE_66739_length_239_cov_1.563725_g58798_i0reverse_frame_3 - 0.00057 20.1 2.8 0.00066 19.9 2.8 1.0 1 0 0 1 1 1 1 EamA-like transporter family T4-Gluco-transf PF09198.10 NODE_66736_length_239_cov_1.568627_g58795_i0forward_frame_2 - 0.053 13.1 0.0 0.087 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase LisH_2 PF16045.5 NODE_66733_length_239_cov_1.593137_g58792_i0reverse_frame_3 - 0.11 11.5 0.4 0.18 10.9 0.4 1.4 1 0 0 1 1 1 0 LisH DUF5465 PF17553.2 NODE_66733_length_239_cov_1.593137_g58792_i0forward_frame_3 - 5.3 7.8 9.2 2.6 8.8 1.4 2.9 3 0 0 3 3 3 0 Family of unknown function (DUF5465) HTH_30 PF13556.6 NODE_66732_length_239_cov_1.598039_g58791_i0reverse_frame_2 - 0.13 12.0 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DNA_pol_B_2 PF03175.13 NODE_66730_length_239_cov_1.607843_g58789_i0forward_frame_2 - 0.00013 21.0 2.8 0.00014 20.9 2.8 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral DUF3136 PF11334.8 NODE_66730_length_239_cov_1.607843_g58789_i0forward_frame_2 - 0.085 12.7 0.2 0.15 11.9 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3136) Arm_vescicular PF18770.1 NODE_66729_length_239_cov_1.607843_g58788_i0reverse_frame_3 - 0.087 12.8 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor Shugoshin_N PF07558.11 NODE_66727_length_239_cov_1.637255_g58786_i0reverse_frame_2 - 0.018 14.9 0.5 0.018 14.9 0.5 1.7 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region PP2C PF00481.21 NODE_66723_length_239_cov_1.740196_g58782_i0reverse_frame_3 - 0.0047 16.6 0.0 0.0047 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C RINGv PF12906.7 NODE_66722_length_239_cov_1.754902_g58781_i0forward_frame_2 - 5.6e-09 36.0 0.2 9e-09 35.3 0.2 1.3 1 0 0 1 1 1 1 RING-variant domain DUF3796 PF12676.7 NODE_66721_length_239_cov_1.764706_g58780_i0reverse_frame_2 - 0.026 15.0 4.9 0.032 14.7 4.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) DUF5559 PF17714.1 NODE_66720_length_239_cov_1.808824_g58779_i0forward_frame_3 - 0.046 13.6 0.1 0.05 13.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5559) WBP-1 PF11669.8 NODE_66718_length_239_cov_1.848039_g58777_i0reverse_frame_3 - 0.0069 17.0 0.3 0.0083 16.7 0.3 1.1 1 0 0 1 1 1 1 WW domain-binding protein 1 DUF1158 PF06643.11 NODE_66715_length_239_cov_1.901961_g58774_i0reverse_frame_3 - 1.3 9.5 5.9 8.5 7.0 5.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1158) Adipogenin PF15202.6 NODE_66712_length_239_cov_1.960784_g58771_i0reverse_frame_3 - 1.9 8.5 5.2 0.31 11.1 0.6 1.8 1 1 1 2 2 2 0 Adipogenin QueH PF02677.14 NODE_66712_length_239_cov_1.960784_g58771_i0reverse_frame_2 - 0.53 10.4 3.6 0.43 10.7 0.7 1.9 2 0 0 2 2 2 0 Epoxyqueuosine reductase QueH zf-C2H2_4 PF13894.6 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.00032 21.3 2.7 0.00066 20.3 2.7 1.6 1 0 0 1 1 1 1 C2H2-type zinc finger zf-Di19 PF05605.12 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.00098 19.4 0.4 0.002 18.4 0.4 1.5 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2 PF00096.26 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.011 16.1 2.6 0.02 15.4 2.6 1.4 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.12 12.9 2.8 8.1 7.1 0.4 2.3 2 0 0 2 2 2 0 Zinc-finger double domain zf-H2C2_5 PF13909.6 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.46 10.3 5.6 1.5 8.6 5.6 1.8 1 1 0 1 1 1 0 C2H2-type zinc-finger domain Gln_deamidase_2 PF18626.1 NODE_66704_length_239_cov_2.068627_g58763_i0reverse_frame_2 - 0.073 13.3 0.0 0.087 13.1 0.0 1.1 1 0 0 1 1 1 0 Glutaminase zf-C3HC4_4 PF15227.6 NODE_66701_length_239_cov_2.127451_g58760_i0reverse_frame_3 - 0.068 13.3 4.0 0.82 9.9 0.2 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING CotJB PF12652.7 NODE_66701_length_239_cov_2.127451_g58760_i0forward_frame_3 - 0.01 16.0 0.1 0.013 15.7 0.1 1.2 1 0 0 1 1 1 0 CotJB protein Myb_DNA-binding PF00249.31 NODE_66701_length_239_cov_2.127451_g58760_i0forward_frame_2 - 2.9e-08 33.8 0.4 3.6e-08 33.5 0.4 1.1 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_66701_length_239_cov_2.127451_g58760_i0forward_frame_2 - 4.4e-05 23.6 0.7 6.2e-05 23.2 0.7 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain CSTF1_dimer PF16699.5 NODE_66701_length_239_cov_2.127451_g58760_i0forward_frame_2 - 0.1 12.4 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Cleavage stimulation factor subunit 1, dimerisation domain PAS_7 PF12860.7 NODE_66697_length_239_cov_2.200980_g58756_i0forward_frame_3 - 0.13 12.5 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 PAS fold GAF_3 PF13492.6 NODE_66697_length_239_cov_2.200980_g58756_i0forward_frame_2 - 0.015 15.6 0.0 0.016 15.5 0.0 1.1 1 0 0 1 1 1 0 GAF domain YrzO PF14142.6 NODE_66695_length_239_cov_2.245098_g58754_i0reverse_frame_2 - 0.22 11.4 0.4 0.47 10.4 0.4 1.5 1 0 0 1 1 1 0 YrzO-like protein Topoisom_bac PF01131.20 NODE_66695_length_239_cov_2.245098_g58754_i0forward_frame_3 - 4.5e-08 32.5 0.0 4.6e-08 32.5 0.0 1.0 1 0 0 1 1 1 1 DNA topoisomerase Trm112p PF03966.16 NODE_66694_length_239_cov_2.259804_g58753_i0forward_frame_2 - 0.17 12.5 0.0 0.2 12.2 0.0 1.3 1 0 0 1 1 1 0 Trm112p-like protein DUF2407_C PF13373.6 NODE_66691_length_239_cov_2.318627_g58750_i0forward_frame_2 - 0.1 12.8 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain PDCD7 PF16021.5 NODE_66686_length_239_cov_2.357843_g58745_i0reverse_frame_3 - 0.026 13.6 0.9 0.026 13.6 0.9 1.0 1 0 0 1 1 1 0 Programmed cell death protein 7 VATC PF18716.1 NODE_66686_length_239_cov_2.357843_g58745_i0forward_frame_2 - 1.5 8.7 8.4 6.1 6.8 0.1 2.5 2 0 0 2 2 2 0 Vms1-associating treble clef domain WD40 PF00400.32 NODE_66684_length_239_cov_2.362745_g58743_i0reverse_frame_2 - 0.0013 19.5 0.0 0.0083 17.0 0.0 2.0 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_66684_length_239_cov_2.362745_g58743_i0reverse_frame_2 - 0.044 14.1 0.0 0.046 14.0 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Peptidase_S31 PF05578.12 NODE_66683_length_239_cov_2.401961_g58742_i0forward_frame_2 - 0.05 13.1 0.1 0.061 12.8 0.1 1.2 1 0 0 1 1 1 0 Pestivirus NS3 polyprotein peptidase S31 Sugar_tr PF00083.24 NODE_66679_length_239_cov_2.465686_g58738_i0reverse_frame_2 - 1.8e-11 43.6 0.1 2e-11 43.4 0.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter RVT_2 PF07727.14 NODE_66672_length_239_cov_2.568627_g58731_i0forward_frame_3 - 1.3e-06 28.3 0.0 1.5e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Cyclin_N PF00134.23 NODE_66671_length_239_cov_2.691176_g58730_i0forward_frame_2 - 1.3e-08 34.7 0.1 1.5e-08 34.5 0.1 1.0 1 0 0 1 1 1 1 Cyclin, N-terminal domain DUF4127 PF13552.6 NODE_66671_length_239_cov_2.691176_g58730_i0forward_frame_2 - 0.044 12.4 0.0 0.046 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4127) Flu_C_NS2 PF03555.14 NODE_66671_length_239_cov_2.691176_g58730_i0forward_frame_2 - 0.05 13.8 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 Influenza C non-structural protein (NS2) Na_K-ATPase PF00287.18 NODE_66670_length_239_cov_2.730392_g58729_i0reverse_frame_3 - 0.021 14.0 0.0 0.024 13.8 0.0 1.0 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain NinD PF17466.2 NODE_66668_length_239_cov_2.769608_g58727_i0forward_frame_2 - 0.17 12.0 0.1 0.23 11.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function LmjF365940-deam PF14421.6 NODE_66667_length_239_cov_2.843137_g58726_i0reverse_frame_2 - 0.13 11.9 0.1 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases PB1 PF00564.24 NODE_66664_length_239_cov_3.093137_g58723_i0forward_frame_3 - 0.073 13.0 0.0 0.081 12.9 0.0 1.2 1 0 0 1 1 1 0 PB1 domain Peripla_BP_4 PF13407.6 NODE_66664_length_239_cov_3.093137_g58723_i0forward_frame_3 - 0.093 12.3 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 NODE_66664_length_239_cov_3.093137_g58723_i0forward_frame_3 - 0.18 11.2 0.0 0.19 11.1 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family DUF667 PF05018.13 NODE_66659_length_239_cov_3.421569_g58718_i0reverse_frame_2 - 0.061 13.0 0.0 0.068 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF667) AZUL PF16558.5 NODE_66658_length_239_cov_3.485294_g58717_i0reverse_frame_3 - 0.062 13.5 0.5 0.08 13.2 0.5 1.2 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A Cep57_CLD_2 PF14197.6 NODE_66655_length_239_cov_3.696078_g58714_i0reverse_frame_3 - 0.044 13.9 0.3 0.066 13.3 0.3 1.2 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 GRDP-like PF07173.12 NODE_66655_length_239_cov_3.696078_g58714_i0reverse_frame_2 - 0.11 13.2 0.2 0.12 13.0 0.2 1.1 1 0 0 1 1 1 0 Glycine-rich domain-containing protein-like DSL PF01414.19 NODE_66651_length_239_cov_4.049020_g58710_i0forward_frame_2 - 0.031 14.5 0.4 0.04 14.2 0.4 1.3 1 0 0 1 1 1 0 Delta serrate ligand LON_substr_bdg PF02190.16 NODE_66649_length_239_cov_4.661765_g58708_i0reverse_frame_2 - 0.00069 19.5 0.5 0.00088 19.2 0.5 1.2 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain CaM_binding PF07839.11 NODE_66642_length_239_cov_27.897059_g58701_i0forward_frame_2 - 0.035 14.8 4.5 0.043 14.6 4.5 1.1 1 0 0 1 1 1 0 Plant calmodulin-binding domain Hepsin-SRCR PF09272.10 NODE_66641_length_239_cov_29.132353_g58700_i0reverse_frame_2 - 0.068 13.7 0.1 0.099 13.2 0.1 1.2 1 0 0 1 1 1 0 Hepsin, SRCR domain SCP2_2 PF13530.6 NODE_66640_length_239_cov_29.720588_g58699_i0reverse_frame_2 - 0.027 14.9 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Sterol carrier protein domain SCP2_2 PF13530.6 NODE_66639_length_239_cov_29.916667_g58698_i0reverse_frame_2 - 0.019 15.3 0.0 0.022 15.2 0.0 1.1 1 0 0 1 1 1 0 Sterol carrier protein domain NTR2 PF15458.6 NODE_66638_length_239_cov_32.367647_g58697_i0forward_frame_3 - 0.052 13.1 3.4 0.058 12.9 3.4 1.0 1 0 0 1 1 1 0 Nineteen complex-related protein 2 Orthoreo_P10 PF07204.11 NODE_66635_length_239_cov_38.691176_g58694_i0forward_frame_2 - 0.015 15.2 0.2 0.02 14.9 0.2 1.2 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DUF3732 PF12532.8 NODE_66634_length_239_cov_39.333333_g58693_i0forward_frame_3 - 0.04 13.5 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3732) NUP PF06516.11 NODE_66634_length_239_cov_39.333333_g58693_i0forward_frame_3 - 0.065 12.5 0.1 0.07 12.3 0.1 1.0 1 0 0 1 1 1 0 Purine nucleoside permease (NUP) Holin_BlyA PF05102.12 NODE_66633_length_239_cov_39.558824_g58692_i0forward_frame_2 - 0.11 12.5 1.8 0.15 12.1 1.8 1.3 1 0 0 1 1 1 0 holin, BlyA family Herpes_DNAp_acc PF04929.12 NODE_66632_length_239_cov_41.681373_g58691_i0reverse_frame_3 - 1.6 7.6 8.2 1.7 7.6 8.2 1.0 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Ras PF00071.22 NODE_66631_length_239_cov_44.014706_g58690_i0reverse_frame_3 - 0.0033 17.0 0.0 0.0048 16.5 0.0 1.2 1 0 0 1 1 1 1 Ras family Asp PF00026.23 NODE_66630_length_239_cov_44.210784_g58689_i0forward_frame_2 - 9e-05 22.0 0.0 0.00011 21.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF3188 PF11384.8 NODE_66629_length_239_cov_44.446078_g58688_i0reverse_frame_3 - 0.16 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3188) Glyco_transf_28 PF03033.20 NODE_66629_length_239_cov_44.446078_g58688_i0forward_frame_3 - 0.00027 21.0 0.0 0.00033 20.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain NA37 PF04245.13 NODE_66628_length_239_cov_44.828431_g58687_i0reverse_frame_2 - 0.0048 16.4 1.6 0.006 16.1 1.6 1.0 1 0 0 1 1 1 1 37-kD nucleoid-associated bacterial protein DUF3458_C PF17432.2 NODE_66623_length_239_cov_47.274510_g58682_i0forward_frame_3 - 0.033 13.6 0.0 0.034 13.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3458_C) ARM repeats THP2 PF09432.10 NODE_66623_length_239_cov_47.274510_g58682_i0forward_frame_3 - 0.041 13.9 0.4 0.046 13.8 0.4 1.1 1 0 0 1 1 1 0 Tho complex subunit THP2 FAS_N PF17828.1 NODE_66622_length_239_cov_50.671569_g58681_i0reverse_frame_2 - 0.0048 16.9 0.2 0.0053 16.8 0.2 1.1 1 0 0 1 1 1 1 N-terminal domain in fatty acid synthase subunit beta DUF1082 PF06449.11 NODE_66621_length_239_cov_52.200980_g58680_i0forward_frame_2 - 0.086 12.7 0.6 0.18 11.6 0.6 1.6 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) DUF5447 PF17525.2 NODE_66619_length_239_cov_58.107843_g58678_i0reverse_frame_2 - 0.13 12.8 0.0 0.17 12.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5447) CHAT PF12770.7 NODE_66616_length_239_cov_60.985294_g58675_i0forward_frame_2 - 0.00099 18.6 0.0 0.001 18.5 0.0 1.0 1 0 0 1 1 1 1 CHAT domain Raptor_N PF14538.6 NODE_66616_length_239_cov_60.985294_g58675_i0forward_frame_2 - 0.017 15.1 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 Raptor N-terminal CASPase like domain Peptidase_C25 PF01364.18 NODE_66616_length_239_cov_60.985294_g58675_i0forward_frame_2 - 0.029 13.6 0.1 0.032 13.4 0.1 1.0 1 0 0 1 1 1 0 Peptidase family C25 Peptidase_C14 PF00656.22 NODE_66616_length_239_cov_60.985294_g58675_i0forward_frame_2 - 0.13 12.2 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Caspase domain Rod_cone_degen PF15201.6 NODE_66614_length_239_cov_66.529412_g58673_i0reverse_frame_3 - 0.072 13.2 0.2 0.072 13.2 0.2 1.4 2 0 0 2 2 2 0 Progressive rod-cone degeneration Dicty_CTDC PF00526.18 NODE_66598_length_239_cov_121.039216_g58657_i0reverse_frame_3 - 0.099 12.6 1.4 4.6 7.2 0.1 2.3 2 0 0 2 2 2 0 Dictyostelium (slime mold) repeat DUF468 PF04318.12 NODE_66596_length_239_cov_140.627451_g58655_i0forward_frame_2 - 0.2 12.4 3.3 0.23 12.2 3.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF468) PRNT PF15174.6 NODE_66591_length_239_cov_194.480392_g58650_i0forward_frame_3 - 0.15 12.1 0.1 0.15 12.1 0.1 1.6 2 0 0 2 2 2 0 Prion-related protein testis-specific Caskin-Pro-rich PF16907.5 NODE_66585_length_239_cov_370.759804_g58644_i0forward_frame_3 - 8.7 7.0 10.5 51 4.5 10.3 1.9 1 1 0 1 1 1 0 Proline rich region of Caskin proteins MiAMP1 PF09117.10 NODE_66579_length_239_cov_8277.985294_g58638_i0forward_frame_2 - 0.066 13.5 0.0 0.075 13.3 0.0 1.1 1 0 0 1 1 1 0 MiAMP1 Herpes_US9 PF06072.11 NODE_66579_length_239_cov_8277.985294_g58638_i0forward_frame_2 - 0.28 11.1 1.6 1.5 8.8 0.7 2.0 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 VanY PF02557.17 NODE_66575_length_240_cov_0.897561_g58634_i0forward_frame_2 - 0.11 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase Ribosomal_S21 PF01165.20 NODE_66573_length_240_cov_0.970732_g58632_i0reverse_frame_2 - 0.17 11.6 0.3 0.17 11.6 0.3 2.5 2 1 1 3 3 3 0 Ribosomal protein S21 PRR18 PF15671.5 NODE_66573_length_240_cov_0.970732_g58632_i0forward_frame_2 - 0.16 11.9 9.0 0.16 11.8 9.0 1.0 1 0 0 1 1 1 0 Proline-rich protein family 18 DUF126 PF01989.16 NODE_66572_length_240_cov_0.970732_g58631_i0reverse_frame_2 - 0.11 12.3 0.2 0.21 11.4 0.1 1.6 1 1 0 1 1 1 0 Aconitase X swivel domain Stathmin PF00836.19 NODE_66570_length_240_cov_0.990244_g58629_i0reverse_frame_3 - 0.024 14.6 0.0 0.028 14.4 0.0 1.0 1 0 0 1 1 1 0 Stathmin family Ste5 PF11610.8 NODE_66568_length_240_cov_1.068293_g58627_i0reverse_frame_2 - 0.11 12.4 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Scaffold protein Ste5, Fus3-binding region TilS PF09179.11 NODE_66564_length_240_cov_1.131707_g58623_i0reverse_frame_2 - 0.0022 18.5 0.3 0.0031 18.0 0.3 1.3 1 0 0 1 1 1 1 TilS substrate binding domain Troponin-I_N PF11636.8 NODE_66564_length_240_cov_1.131707_g58623_i0reverse_frame_2 - 0.17 11.8 0.5 0.17 11.8 0.5 2.0 2 0 0 2 2 2 0 Troponin I residues 1-32 Ribosomal_60s PF00428.19 NODE_66562_length_240_cov_1.156098_g58621_i0reverse_frame_3 - 4.8 7.8 10.6 7 7.3 10.6 1.3 1 1 0 1 1 1 0 60s Acidic ribosomal protein NST1 PF13945.6 NODE_66562_length_240_cov_1.156098_g58621_i0reverse_frame_2 - 7.1 6.7 20.8 8.2 6.5 20.8 1.0 1 0 0 1 1 1 0 Salt tolerance down-regulator Menin PF05053.13 NODE_66562_length_240_cov_1.156098_g58621_i0reverse_frame_2 - 8.7 4.6 18.7 9.3 4.5 18.7 1.0 1 0 0 1 1 1 0 Menin DUF2721 PF11026.8 NODE_66562_length_240_cov_1.156098_g58621_i0forward_frame_3 - 4.1 7.3 14.2 4.9 7.0 14.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) EcpB_C PF18649.1 NODE_66557_length_240_cov_1.170732_g58616_i0reverse_frame_2 - 0.083 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 EcpB C-terminal domain Peptidase_S39 PF02122.15 NODE_66550_length_240_cov_1.292683_g58609_i0reverse_frame_2 - 0.21 11.1 0.0 0.24 10.9 0.0 1.0 1 0 0 1 1 1 0 Peptidase S39 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks306.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks306.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks306.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks306.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SRCR PF00530.18 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 1.5e-11 44.7 0.2 1.7e-11 44.5 0.2 1.0 1 0 0 1 1 1 1 Scavenger receptor cysteine-rich domain SRCR_2 PF15494.6 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 9.3e-08 32.5 0.1 1.1e-07 32.3 0.1 1.2 1 1 0 1 1 1 1 Scavenger receptor cysteine-rich domain Hepsin-SRCR PF09272.10 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 0.0003 21.3 0.0 0.00032 21.2 0.0 1.2 1 0 0 1 1 1 1 Hepsin, SRCR domain Toxin_23 PF08093.11 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 0.012 15.7 0.5 5.6 7.2 0.1 2.6 2 0 0 2 2 2 0 Magi 5 toxic peptide family YecR PF13992.6 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 0.062 13.6 3.3 0.083 13.2 3.3 1.3 1 1 0 1 1 1 0 YecR-like lipoprotein Sarcoglycan_2 PF05510.13 NODE_66546_length_240_cov_1.321951_g58605_i0reverse_frame_3 - 0.0013 17.6 0.3 0.0013 17.6 0.3 1.0 1 0 0 1 1 1 1 Sarcoglycan alpha/epsilon Antimicrobial25 PF16839.5 NODE_66545_length_240_cov_1.356098_g58604_i0reverse_frame_2 - 2.8 8.1 9.6 1 9.5 1.9 2.6 2 1 1 3 3 3 0 Nematode antimicrobial peptide GBP PF02263.19 NODE_66543_length_240_cov_1.360976_g58602_i0forward_frame_3 - 9.3e-23 80.8 0.3 9.7e-23 80.7 0.3 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain RHD3 PF05879.12 NODE_66543_length_240_cov_1.360976_g58602_i0forward_frame_3 - 0.12 10.5 0.0 0.13 10.4 0.0 1.0 1 0 0 1 1 1 0 Root hair defective 3 GTP-binding protein (RHD3) Lamprin PF06403.11 NODE_66538_length_240_cov_1.380488_g58597_i0forward_frame_3 - 1.8 8.5 11.7 2.8 7.9 11.7 1.4 1 1 0 1 1 1 0 Lamprin Sporozoite_P67 PF05642.11 NODE_66538_length_240_cov_1.380488_g58597_i0forward_frame_3 - 2.1 6.3 4.3 2.1 6.3 4.3 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Lamprin PF06403.11 NODE_66538_length_240_cov_1.380488_g58597_i0forward_frame_2 - 1.5 8.7 11.2 4.6 7.2 11.2 1.6 1 1 0 1 1 1 0 Lamprin RTT107_BRCT_5 PF16770.5 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_2 - 0.12 12.3 2.4 0.17 11.8 2.4 1.4 1 1 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain Cucumopine_C PF18631.1 NODE_66537_length_240_cov_1.400000_g58596_i0forward_frame_2 - 0.14 12.1 0.1 0.16 11.9 0.1 1.1 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain zf-CCCH_4 PF18044.1 NODE_66528_length_240_cov_1.531707_g58587_i0forward_frame_3 - 0.0073 16.1 0.2 0.017 14.9 0.2 1.6 1 0 0 1 1 1 1 CCCH-type zinc finger MMACHC PF16690.5 NODE_66523_length_240_cov_1.556098_g58582_i0forward_frame_2 - 0.13 11.9 0.1 0.14 11.8 0.1 1.0 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type C family Uricase PF01014.18 NODE_66520_length_240_cov_1.585366_g58579_i0reverse_frame_2 - 0.16 12.3 0.0 0.22 11.8 0.0 1.3 1 0 0 1 1 1 0 Uricase DUF5330 PF17264.2 NODE_66516_length_240_cov_1.614634_g58575_i0reverse_frame_2 - 0.12 12.5 0.9 0.2 11.7 0.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5330) CarbpepA_inh PF02977.15 NODE_66515_length_240_cov_1.634146_g58574_i0reverse_frame_3 - 0.32 10.8 6.9 0.18 11.6 4.9 1.6 1 1 1 2 2 2 0 Carboxypeptidase A inhibitor 7tm_4 PF13853.6 NODE_66512_length_240_cov_1.673171_g58571_i0reverse_frame_3 - 0.039 13.7 0.2 0.043 13.5 0.2 1.0 1 0 0 1 1 1 0 Olfactory receptor Arabinose_Iso_C PF11762.8 NODE_66512_length_240_cov_1.673171_g58571_i0forward_frame_3 - 0.1 12.4 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 L-arabinose isomerase C-terminal domain Ac76 PF05814.11 NODE_66505_length_240_cov_1.741463_g58564_i0forward_frame_3 - 2.1 8.4 6.5 2.9 8.0 6.5 1.3 1 0 0 1 1 1 0 Orf76 (Ac76) Tautomerase PF01361.21 NODE_66501_length_240_cov_1.800000_g58560_i0reverse_frame_2 - 5.2e-10 39.1 0.1 7.4e-10 38.6 0.1 1.2 1 0 0 1 1 1 1 Tautomerase enzyme DUF1682 PF07946.14 NODE_66498_length_240_cov_1.858537_g58557_i0reverse_frame_2 - 0.02 14.1 0.0 0.024 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) STAR_dimer PF16544.5 NODE_66498_length_240_cov_1.858537_g58557_i0reverse_frame_2 - 0.078 12.6 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Homodimerisation region of STAR domain protein Fun_ATP-synt_8 PF05933.13 NODE_66494_length_240_cov_1.887805_g58553_i0reverse_frame_3 - 0.038 14.2 1.7 0.038 14.2 1.7 1.6 2 0 0 2 2 2 0 Fungal ATP synthase protein 8 (A6L) DUF276 PF03434.13 NODE_66493_length_240_cov_1.887805_g58552_i0reverse_frame_2 - 0.012 14.8 0.1 0.014 14.6 0.1 1.1 1 0 0 1 1 1 0 DUF276 TMEM234 PF10639.9 NODE_66493_length_240_cov_1.887805_g58552_i0forward_frame_3 - 0.11 12.6 0.5 0.12 12.4 0.5 1.1 1 0 0 1 1 1 0 Putative transmembrane family 234 DZR PF12773.7 NODE_66492_length_240_cov_1.897561_g58551_i0reverse_frame_3 - 0.0034 17.4 1.1 0.0051 16.8 1.1 1.2 1 0 0 1 1 1 1 Double zinc ribbon Ribosomal_L32p PF01783.23 NODE_66492_length_240_cov_1.897561_g58551_i0reverse_frame_3 - 0.065 13.5 0.2 0.08 13.2 0.2 1.2 1 0 0 1 1 1 0 Ribosomal L32p protein family Gemini_AC4_5 PF04807.12 NODE_66491_length_240_cov_1.902439_g58550_i0reverse_frame_2 - 0.9 9.3 0.1 0.9 9.3 0.1 2.1 3 0 0 3 3 3 0 Geminivirus AC4/5 conserved region EF-hand_1 PF00036.32 NODE_66490_length_240_cov_1.926829_g58549_i0reverse_frame_3 - 0.24 11.1 1.2 0.38 10.4 1.2 1.3 1 0 0 1 1 1 0 EF hand RseC_MucC PF04246.12 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.0094 15.9 1.7 0.011 15.7 1.7 1.1 1 0 0 1 1 1 1 Positive regulator of sigma(E), RseC/MucC Na_Ca_ex PF01699.24 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.065 13.2 7.0 0.075 13.0 7.0 1.1 1 0 0 1 1 1 0 Sodium/calcium exchanger protein DUF2208 PF09973.9 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.098 12.3 7.3 0.11 12.1 7.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) Tmemb_55A PF09788.9 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.11 11.5 0.9 0.12 11.5 0.9 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A SLATT_3 PF18184.1 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.14 12.3 0.3 0.17 12.1 0.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 3 DUF2207 PF09972.9 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.27 9.9 3.7 0.28 9.9 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3043 PF11241.8 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.36 10.8 3.4 0.51 10.3 3.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Ac81 PF05820.11 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.39 10.3 5.7 0.46 10.0 5.7 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 YajC PF02699.15 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.79 9.6 5.2 0.14 12.0 1.2 1.7 1 1 1 2 2 2 0 Preprotein translocase subunit DUF3687 PF12459.8 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 3.2 7.3 10.9 1.6 8.3 0.6 2.2 1 1 1 2 2 2 0 D-Ala-teichoic acid biosynthesis protein Read-through PF16814.5 NODE_66488_length_240_cov_1.936585_g58547_i0reverse_frame_2 - 0.11 12.3 0.1 0.13 12.1 0.1 1.0 1 0 0 1 1 1 0 Read-through domain Gmad1 PF10647.9 NODE_66488_length_240_cov_1.936585_g58547_i0forward_frame_3 - 0.22 11.2 0.0 0.24 11.1 0.0 1.0 1 0 0 1 1 1 0 Lipoprotein LpqB beta-propeller domain PGM_PMM_III PF02880.16 NODE_66486_length_240_cov_1.946341_g58545_i0forward_frame_3 - 1.1e-13 51.4 0.0 1.3e-13 51.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Pox_A3L PF05288.11 NODE_66486_length_240_cov_1.946341_g58545_i0forward_frame_2 - 0.1 12.6 2.8 0.17 11.9 2.8 1.3 1 0 0 1 1 1 0 Poxvirus A3L Protein Chal_sti_synt_N PF00195.19 NODE_66483_length_240_cov_1.951220_g58542_i0forward_frame_3 - 0.11 11.9 0.2 0.1 12.0 0.2 1.1 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain Type2_restr_D3 PF16902.5 NODE_66483_length_240_cov_1.951220_g58542_i0forward_frame_3 - 0.18 11.7 2.3 0.38 10.7 0.6 2.0 2 0 0 2 2 2 0 Type-2 restriction enzyme D3 domain CRAL_TRIO PF00650.20 NODE_66481_length_240_cov_2.000000_g58540_i0forward_frame_2 - 2.2e-09 37.2 0.0 2.6e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain Tom6 PF17112.5 NODE_66481_length_240_cov_2.000000_g58540_i0forward_frame_2 - 0.19 11.3 0.1 0.27 10.8 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom6, fungal YbfN PF13982.6 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_3 - 0.22 11.8 2.7 12 6.2 0.9 2.1 1 1 1 2 2 2 0 YbfN-like lipoprotein Opy2 PF09463.10 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.011 16.0 15.8 0.096 13.0 4.5 2.3 2 0 0 2 2 2 0 Opy2 protein zf-MYND PF01753.18 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.24 11.5 6.0 1.3 9.2 0.9 2.3 2 0 0 2 2 2 0 MYND finger Lustrin_cystein PF14625.6 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.32 11.4 14.7 2.1 8.8 5.2 2.5 1 1 1 2 2 2 0 Lustrin, cysteine-rich repeated domain Ephrin_rec_like PF07699.13 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.34 10.7 14.9 1.9e+02 1.9 14.9 2.5 1 1 0 1 1 1 0 Putative ephrin-receptor like Dickkopf_N PF04706.12 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.55 10.8 6.7 6.3 7.4 0.8 2.4 1 1 2 3 3 3 0 Dickkopf N-terminal cysteine-rich region TNFR_c6 PF00020.18 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.77 10.2 11.5 0.68 10.4 3.6 2.5 1 1 1 2 2 2 0 TNFR/NGFR cysteine-rich region MSC PF09402.10 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 1.7 8.0 5.1 1.9 7.8 5.1 1.1 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain PH_13 PF16652.5 NODE_66480_length_240_cov_2.029268_g58539_i0forward_frame_2 - 0.091 12.6 2.4 0.11 12.4 2.4 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain UPA PF17217.3 NODE_66478_length_240_cov_2.053659_g58537_i0forward_frame_2 - 0.077 12.9 0.1 0.089 12.7 0.1 1.1 1 0 0 1 1 1 0 UPA domain CT47 PF15623.6 NODE_66473_length_240_cov_2.107317_g58532_i0forward_frame_2 - 0.18 11.6 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Cancer/testis gene family 47 SCO1-SenC PF02630.14 NODE_66472_length_240_cov_2.121951_g58531_i0forward_frame_2 - 0.13 12.2 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 SCO1/SenC DHR10 PF18595.1 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.006 16.6 10.3 0.027 14.5 10.3 1.8 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain DUF1524 PF07510.11 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.038 13.8 5.2 0.044 13.7 5.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1524) DUF1690 PF07956.11 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.097 13.1 6.8 0.11 12.9 6.8 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF16 PF01519.16 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.12 12.9 6.3 0.13 12.8 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF16 Wtap PF17098.5 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.18 11.7 8.6 0.14 12.1 5.6 1.8 1 1 1 2 2 2 0 WTAP/Mum2p family TMPIT PF07851.13 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.64 9.2 4.0 0.7 9.1 4.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein Tho2 PF11262.8 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.77 8.9 6.0 0.84 8.8 6.0 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 V_ATPase_I PF01496.19 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 1.7 6.5 4.8 1.7 6.4 4.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Atg14 PF10186.9 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 2 7.4 9.0 2.2 7.3 9.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 GLYCAM-1 PF05242.11 NODE_66470_length_240_cov_2.131707_g58529_i0reverse_frame_2 - 0.0053 16.9 0.2 0.0061 16.7 0.2 1.1 1 0 0 1 1 1 1 Glycosylation-dependent cell adhesion molecule 1 (GlyCAM-1) RVT_1 PF00078.27 NODE_66466_length_240_cov_2.190244_g58525_i0forward_frame_3 - 6.1e-05 22.6 0.0 6.4e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF223 PF02721.14 NODE_66465_length_240_cov_2.200000_g58524_i0forward_frame_3 - 0.01 16.1 0.2 0.013 15.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF223 Tenui_NCP PF04876.12 NODE_66464_length_240_cov_2.204878_g58523_i0forward_frame_2 - 0.02 14.5 0.8 0.025 14.1 0.7 1.3 1 1 0 1 1 1 0 Tenuivirus major non-capsid protein HisG_C PF08029.11 NODE_66462_length_240_cov_2.214634_g58521_i0forward_frame_3 - 0.092 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 HisG, C-terminal domain Keratin_B2_2 PF13885.6 NODE_66459_length_240_cov_2.253659_g58518_i0reverse_frame_3 - 0.06 13.3 1.4 0.06 13.3 1.4 1.5 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein SLAIN PF15301.6 NODE_66459_length_240_cov_2.253659_g58518_i0reverse_frame_2 - 0.13 11.5 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 SLAIN motif-containing family zf-trcl PF13451.6 NODE_66458_length_240_cov_2.263415_g58517_i0reverse_frame_2 - 0.076 12.9 0.0 0.22 11.4 0.0 1.8 2 0 0 2 2 2 0 Probable zinc-ribbon domain Oxidored-like PF09791.9 NODE_66456_length_240_cov_2.297561_g58515_i0reverse_frame_2 - 0.0028 17.3 1.2 0.0044 16.6 1.2 1.3 1 0 0 1 1 1 1 Oxidoreductase-like protein, N-terminal zf-BED PF02892.15 NODE_66455_length_240_cov_2.312195_g58514_i0forward_frame_2 - 0.065 13.3 1.0 0.1 12.7 0.8 1.5 1 1 0 1 1 1 0 BED zinc finger Vps35 PF03635.17 NODE_66452_length_240_cov_2.375610_g58511_i0forward_frame_3 - 1.5e-24 86.6 1.2 1.6e-24 86.5 1.2 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 IL34 PF15036.6 NODE_66452_length_240_cov_2.375610_g58511_i0forward_frame_3 - 0.096 12.7 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Interleukin 34 Glyco_hydro_62 PF03664.13 NODE_66451_length_240_cov_2.429268_g58510_i0reverse_frame_3 - 0.027 13.8 0.0 0.027 13.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 62 Zip PF02535.22 NODE_66451_length_240_cov_2.429268_g58510_i0reverse_frame_3 - 0.24 10.6 0.0 0.27 10.4 0.0 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF5562 PF17717.1 NODE_66450_length_240_cov_2.463415_g58509_i0forward_frame_3 - 0.14 12.2 0.3 0.17 11.8 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5562) MR_MLE_C PF13378.6 NODE_66448_length_240_cov_2.560976_g58507_i0reverse_frame_3 - 1.5e-11 44.3 0.1 1.5e-11 44.3 0.1 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like MORN PF02493.20 NODE_66445_length_240_cov_2.751220_g58504_i0reverse_frame_3 - 3e-13 48.8 14.0 1.3e-06 27.9 1.2 3.5 4 0 0 4 4 4 2 MORN repeat Tudor_2 PF18104.1 NODE_66445_length_240_cov_2.751220_g58504_i0reverse_frame_3 - 2.2 8.0 6.8 4.2 7.1 0.5 2.7 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain FlxA PF14282.6 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.0043 17.0 5.0 0.0054 16.7 5.0 1.1 1 0 0 1 1 1 1 FlxA-like protein DUF4446 PF14584.6 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.025 14.6 1.7 0.026 14.5 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) ETRAMP PF09716.10 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.047 13.7 4.4 0.064 13.3 4.4 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DivIC PF04977.15 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.12 12.1 5.9 0.23 11.2 5.9 1.6 1 1 0 1 1 1 0 Septum formation initiator AI-2E_transport PF01594.16 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.14 11.3 0.3 0.16 11.1 0.3 1.0 1 0 0 1 1 1 0 AI-2E family transporter DUF4829 PF16111.5 NODE_66441_length_240_cov_2.790244_g58500_i0reverse_frame_2 - 0.18 12.6 2.6 0.21 12.4 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4829) DUF727 PF05303.12 NODE_66440_length_240_cov_2.809756_g58499_i0reverse_frame_3 - 0.11 12.6 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF727) HATPase_c PF02518.26 NODE_66439_length_240_cov_2.878049_g58498_i0forward_frame_2 - 2.2e-07 31.4 0.1 2.4e-07 31.2 0.1 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAPT PF11770.8 NODE_66438_length_240_cov_2.902439_g58497_i0forward_frame_2 - 0.059 13.2 0.6 0.065 13.1 0.6 1.1 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) ASFV_L11L PF05293.11 NODE_66435_length_240_cov_3.356098_g58494_i0reverse_frame_2 - 0.19 12.1 1.6 13 6.2 0.0 2.2 1 1 1 2 2 2 0 African swine fever virus (ASFV) L11L protein PTPA PF03095.15 NODE_66435_length_240_cov_3.356098_g58494_i0forward_frame_2 - 3.9e-23 82.4 1.2 4e-23 82.3 1.2 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein DUF4164 PF13747.6 NODE_66434_length_240_cov_3.478049_g58493_i0reverse_frame_3 - 0.033 14.5 1.7 0.041 14.1 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) T4_neck-protein PF11649.8 NODE_66433_length_240_cov_3.780488_g58492_i0reverse_frame_3 - 0.032 13.5 0.0 0.037 13.4 0.0 1.0 1 0 0 1 1 1 0 Virus neck protein Herpes_U15 PF05613.11 NODE_66428_length_240_cov_6.795122_g58487_i0forward_frame_3 - 0.019 15.7 0.0 0.022 15.5 0.0 1.1 1 0 0 1 1 1 0 Human herpesvirus U15 protein SPT_ssu-like PF11779.8 NODE_66425_length_240_cov_17.775610_g58484_i0forward_frame_2 - 0.0057 16.3 2.0 0.0063 16.1 0.6 1.7 2 0 0 2 2 2 1 Small subunit of serine palmitoyltransferase-like Herpes_LMP1 PF05297.11 NODE_66425_length_240_cov_17.775610_g58484_i0forward_frame_2 - 1.1 8.3 3.0 1.2 8.3 3.0 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) ParA PF10609.9 NODE_66423_length_240_cov_28.965854_g58482_i0reverse_frame_3 - 0.17 11.3 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase TonB_N PF16031.5 NODE_66422_length_240_cov_29.936585_g58481_i0reverse_frame_3 - 5.7 7.5 30.1 9.2 6.8 30.1 1.4 1 1 0 1 1 1 0 TonB polyproline region Serglycin PF04360.12 NODE_66422_length_240_cov_29.936585_g58481_i0forward_frame_3 - 0.034 14.1 0.5 0.04 13.9 0.5 1.1 1 0 0 1 1 1 0 Serglycin PH_17 PF18012.1 NODE_66418_length_240_cov_32.707317_g58477_i0forward_frame_2 - 0.043 13.6 0.1 0.069 12.9 0.1 1.4 1 0 0 1 1 1 0 PH domain PKD_channel PF08016.12 NODE_66417_length_240_cov_32.829268_g58476_i0forward_frame_3 - 0.14 10.8 4.0 0.18 10.5 4.0 1.0 1 0 0 1 1 1 0 Polycystin cation channel SFTA2 PF15210.6 NODE_66408_length_240_cov_43.492683_g58467_i0forward_frame_3 - 0.068 13.1 0.8 0.068 13.1 0.8 2.0 1 1 1 2 2 2 0 Surfactant-associated protein 2 RPN5_C PF18098.1 NODE_66407_length_240_cov_43.517073_g58466_i0reverse_frame_2 - 0.39 10.9 2.9 1.1 9.4 2.9 1.7 1 1 0 1 1 1 0 26S proteasome regulatory subunit RPN5 C-terminal domain S-antigen PF05756.11 NODE_66404_length_240_cov_49.424390_g58463_i0reverse_frame_3 - 6.5 7.2 8.2 1.2 9.6 4.5 1.6 1 1 1 2 2 2 0 S-antigen protein NodS PF05401.11 NODE_66404_length_240_cov_49.424390_g58463_i0forward_frame_3 - 0.036 13.7 0.1 0.038 13.6 0.1 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) Rubi_NSP_C PF12601.8 NODE_66403_length_240_cov_49.970732_g58462_i0reverse_frame_3 - 0.1 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Rubivirus non-structural protein VP_N-CPKC PF11475.8 NODE_66403_length_240_cov_49.970732_g58462_i0forward_frame_3 - 0.054 13.4 2.8 0.089 12.7 2.8 1.4 1 0 0 1 1 1 0 Virion protein N terminal domain DDE_2 PF02914.15 NODE_66401_length_240_cov_50.790244_g58460_i0forward_frame_2 - 0.03 14.1 0.1 0.035 13.8 0.1 1.0 1 0 0 1 1 1 0 Bacteriophage Mu transposase DUF4060 PF13269.6 NODE_66401_length_240_cov_50.790244_g58460_i0forward_frame_2 - 0.065 13.3 0.1 0.086 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4060) WavE PF07507.11 NODE_66399_length_240_cov_53.043902_g58458_i0reverse_frame_2 - 0.037 13.2 0.1 0.037 13.2 0.1 1.0 1 0 0 1 1 1 0 WavE lipopolysaccharide synthesis DUF5087 PF17006.5 NODE_66396_length_240_cov_54.000000_g58455_i0reverse_frame_3 - 0.0091 15.6 0.3 0.0092 15.6 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5087) PRIMA1 PF16101.5 NODE_66395_length_240_cov_57.200000_g58454_i0forward_frame_3 - 1.1 9.2 8.5 0.46 10.5 5.2 2.0 1 1 1 2 2 2 0 Proline-rich membrane anchor 1 CBFD_NFYB_HMF PF00808.23 NODE_66393_length_240_cov_60.297561_g58452_i0forward_frame_2 - 0.0051 17.1 0.1 0.0079 16.5 0.1 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone DUF3488 PF11992.8 NODE_66391_length_240_cov_68.682927_g58450_i0forward_frame_2 - 0.025 13.5 7.4 0.029 13.3 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) Porin_7 PF16956.5 NODE_66388_length_240_cov_75.702439_g58447_i0reverse_frame_3 - 0.087 12.5 0.0 0.087 12.5 0.0 1.1 1 0 0 1 1 1 0 Putative general bacterial porin U83 PF17465.2 NODE_66388_length_240_cov_75.702439_g58447_i0forward_frame_2 - 0.62 10.2 4.6 0.15 12.2 0.8 1.8 1 1 1 2 2 2 0 Chemokine-like protein, HHV-6 U83 gene product DUF2644 PF10841.8 NODE_66384_length_240_cov_79.409756_g58443_i0reverse_frame_2 - 0.019 15.2 0.6 0.034 14.4 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) DUF2663 PF10864.8 NODE_66384_length_240_cov_79.409756_g58443_i0reverse_frame_2 - 0.034 14.6 1.1 0.04 14.3 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF3232 PF11554.8 NODE_66384_length_240_cov_79.409756_g58443_i0forward_frame_3 - 0.13 12.6 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) DUF1467 PF07330.12 NODE_66382_length_240_cov_84.570732_g58441_i0reverse_frame_2 - 0.28 11.2 4.3 0.16 11.9 2.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1467) NR_Repeat PF14046.6 NODE_66381_length_240_cov_88.800000_g58440_i0reverse_frame_3 - 0.0082 16.2 0.2 0.012 15.8 0.2 1.2 1 0 0 1 1 1 1 Nuclear receptor repeat Cyclotide PF03784.13 NODE_66374_length_240_cov_111.458537_g58433_i0forward_frame_3 - 8.3 6.6 11.8 2.9 8.1 0.6 2.7 3 0 0 3 3 3 0 Cyclotide family YqjK PF13997.6 NODE_66371_length_240_cov_120.429268_g58430_i0forward_frame_3 - 0.073 13.3 0.1 0.095 13.0 0.1 1.2 1 0 0 1 1 1 0 YqjK-like protein Neuraminidase PF18413.1 NODE_66370_length_240_cov_127.239024_g58429_i0reverse_frame_2 - 0.067 12.9 1.4 0.082 12.6 1.4 1.2 1 0 0 1 1 1 0 Neuraminidase-like domain MORN PF02493.20 NODE_66370_length_240_cov_127.239024_g58429_i0forward_frame_2 - 0.00032 20.4 1.5 0.00032 20.4 1.5 1.8 2 0 0 2 2 2 1 MORN repeat Phage_holin_3_6 PF07332.11 NODE_66367_length_240_cov_141.560976_g58426_i0forward_frame_3 - 0.57 10.2 6.8 0.6 10.2 6.8 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III AAA_lid_10 PF17872.1 NODE_66363_length_240_cov_158.492683_g58422_i0reverse_frame_2 - 0.012 15.7 0.2 0.013 15.6 0.2 1.1 1 0 0 1 1 1 0 AAA lid domain Acatn PF13000.7 NODE_66361_length_240_cov_178.248780_g58420_i0forward_frame_3 - 0.093 11.2 0.0 0.1 11.1 0.0 1.0 1 0 0 1 1 1 0 Acetyl-coenzyme A transporter 1 NS3_envE PF02723.14 NODE_66354_length_240_cov_1376.409756_g58413_i0reverse_frame_2 - 0.2 11.7 2.7 0.24 11.5 2.4 1.4 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Vel1p PF10339.9 ORF9998 - 0.13 11.7 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 Yeast-specific zinc responsive Arf PF00025.21 ORF99962 - 6.7e-05 22.4 0.1 7e-05 22.3 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family ATP_bind_1 PF03029.17 ORF99962 - 0.082 12.7 0.1 0.085 12.6 0.1 1.0 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein LSR PF05624.14 ORF99874 - 0.043 13.8 10.8 0.061 13.3 10.8 1.3 1 0 0 1 1 1 0 Lipolysis stimulated receptor (LSR) ThrE PF06738.12 ORF99177 - 0.023 14.1 1.9 0.026 13.9 1.9 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter TEA PF01285.18 ORF98937 - 0.16 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 TEA/ATTS domain PapC_C PF13953.6 ORF98861 - 0.0036 17.1 0.0 0.0047 16.7 0.0 1.1 1 0 0 1 1 1 1 PapC C-terminal domain Leu_leader PF08054.11 ORF98861 - 0.4 10.3 1.7 0.68 9.6 1.7 1.3 1 0 0 1 1 1 0 Leucine operon leader peptide YAcAr PF10686.9 ORF98165 - 0.16 11.9 1.6 0.36 10.8 0.2 1.9 1 1 1 2 2 2 0 YspA, cpYpsA-related SLOG family zf-nanos PF05741.13 ORF98078 - 0.13 12.5 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Nanos RNA binding domain HPIH PF13323.6 ORF97581 - 0.034 14.0 0.3 0.042 13.7 0.3 1.2 1 0 0 1 1 1 0 N-terminal domain with HPIH motif MNHE PF01899.16 ORF97502 - 0.093 12.5 0.3 0.098 12.4 0.3 1.0 1 0 0 1 1 1 0 Na+/H+ ion antiporter subunit CDC24 PF06395.11 ORF96748 - 0.046 14.0 0.0 0.06 13.6 0.0 1.3 1 0 0 1 1 1 0 CDC24 Calponin DUF4980 PF16352.5 ORF96748 - 0.062 13.3 0.0 0.078 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4980) RMI1_N PF08585.12 ORF96195 - 8.6e-13 48.5 0.1 9.6e-13 48.4 0.1 1.0 1 0 0 1 1 1 1 RecQ mediated genome instability protein Caleosin PF05042.13 ORF96141 - 0.056 13.4 0.8 0.082 12.8 0.6 1.3 1 1 0 1 1 1 0 Caleosin related protein DUF3410 PF11890.8 ORF96020 - 0.05 13.4 0.1 0.055 13.3 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3410) DivIC PF04977.15 ORF95732 - 1.7 8.5 6.0 0.4 10.5 2.1 1.9 2 1 0 2 2 2 0 Septum formation initiator Ribosomal_L38e PF01781.18 ORF95254 - 1.2e-20 73.4 3.2 1.4e-20 73.2 3.2 1.0 1 0 0 1 1 1 1 Ribosomal L38e protein family SSI PF00720.17 ORF95088 - 0.13 12.2 0.5 0.17 11.9 0.5 1.1 1 0 0 1 1 1 0 Subtilisin inhibitor-like DUF2951 PF11166.8 ORF95002 - 0.014 15.6 2.6 0.018 15.3 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) CRAL_TRIO PF00650.20 ORF94909 - 0.00022 21.0 0.0 0.00029 20.6 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain RVT_1 PF00078.27 ORF94880 - 0.0057 16.2 0.1 0.006 16.1 0.1 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) TetR_C_36 PF18598.1 ORF94736 - 0.1 12.5 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain SBF2 PF12335.8 ORF94362 - 0.069 12.8 0.0 0.071 12.7 0.0 1.0 1 0 0 1 1 1 0 Myotubularin protein DUF4268 PF14088.6 ORF94197 - 0.093 12.6 0.0 0.097 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4268) Chalcone PF02431.15 ORF94192 - 0.13 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Chalcone-flavanone isomerase UPF0370 PF13980.6 ORF94192 - 1.6 8.8 4.5 7.6 6.7 3.9 1.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0370) Aminotran_1_2 PF00155.21 ORF94181 - 2.5e-08 33.5 0.0 2.5e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Osmo_CC PF08946.10 ORF94181 - 0.032 14.5 0.8 1.2 9.5 0.0 2.6 2 1 1 3 3 3 0 Osmosensory transporter coiled coil DegT_DnrJ_EryC1 PF01041.17 ORF94181 - 0.084 12.2 0.0 0.084 12.2 0.0 1.1 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family FAM199X PF15814.5 ORF93478 - 2.3 7.2 6.6 2.4 7.1 6.6 1.0 1 0 0 1 1 1 0 Protein family FAM199X SBF2 PF12335.8 ORF93342 - 0.069 12.8 0.0 0.071 12.7 0.0 1.0 1 0 0 1 1 1 0 Myotubularin protein PAP_PilO PF06864.12 ORF93228 - 0.14 11.0 0.2 0.15 10.9 0.2 1.0 1 0 0 1 1 1 0 Pilin accessory protein (PilO) DUF4139 PF13598.6 ORF93083 - 0.056 13.1 0.1 0.06 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) Ank_2 PF12796.7 ORF93012 - 0.015 15.9 0.0 0.017 15.7 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) ENTH PF01417.20 ORF93012 - 0.036 14.1 0.2 0.04 14.0 0.2 1.1 1 0 0 1 1 1 0 ENTH domain Ank_4 PF13637.6 ORF93012 - 0.068 13.8 0.0 0.1 13.2 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) PsbR PF04725.12 ORF93012 - 0.07 13.5 0.1 0.096 13.0 0.1 1.3 1 1 0 1 1 1 0 Photosystem II 10 kDa polypeptide PsbR EF-hand_1 PF00036.32 ORF92401 - 2.5e-09 36.0 0.9 0.0017 17.7 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF92401 - 1.8e-08 34.1 2.0 0.00018 21.3 0.3 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF92401 - 2.5e-08 33.2 1.1 0.0019 18.0 0.2 2.5 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF92401 - 6e-08 33.0 0.2 7.5e-08 32.7 0.2 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF92401 - 0.025 14.1 1.3 4.5 6.9 0.0 2.4 2 0 0 2 2 2 0 EF hand Ras PF00071.22 ORF9178 - 2.5e-07 30.4 0.0 2.5e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF9178 - 0.0015 18.7 0.0 0.0016 18.7 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Inhibitor_I29 PF08246.12 ORF91775 - 1.4e-06 28.7 3.8 1.8e-06 28.3 3.8 1.2 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF91773 - 0.0038 17.3 0.0 0.0042 17.2 0.0 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Tctex-1 PF03645.13 ORF91760 - 0.0075 16.5 0.7 0.029 14.6 0.7 1.9 1 1 0 1 1 1 1 Tctex-1 family Tugs PF17840.1 ORF91760 - 0.023 14.9 0.0 0.11 12.8 0.0 1.9 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain OpcA_G6PD_assem PF10128.9 ORF91649 - 0.074 12.6 0.0 0.074 12.6 0.0 1.0 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase subunit ydhR PF08803.11 ORF91273 - 0.025 14.5 0.0 0.031 14.2 0.0 1.2 1 0 0 1 1 1 0 Putative mono-oxygenase ydhR RasGAP_C PF03836.15 ORF91194 - 0.023 14.8 0.4 0.026 14.7 0.4 1.1 1 0 0 1 1 1 0 RasGAP C-terminus CALM_bind PF16025.5 ORF90734 - 0.076 13.5 5.8 0.099 13.1 5.8 1.2 1 0 0 1 1 1 0 Calcium-dependent calmodulin binding MmgE_PrpD PF03972.14 ORF90664 - 0.19 10.2 0.0 0.21 10.1 0.0 1.1 1 0 0 1 1 1 0 MmgE/PrpD family Pkinase PF00069.25 ORF90498 - 3.9e-16 59.2 0.0 4.2e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90498 - 3.3e-07 29.9 0.1 3.3e-07 29.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF90498 - 0.096 12.0 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Kinase-like DUF5422 PF17459.2 ORF89337 - 0.098 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5422) PCSK9_C3 PF18463.1 ORF89144 - 0.037 14.2 1.2 0.051 13.8 1.2 1.3 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain DUF2207 PF09972.9 ORF8876 - 5.6 5.6 4.9 5.3 5.7 4.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TnpV PF14198.6 ORF87954 - 0.057 13.4 0.4 0.092 12.7 0.4 1.4 1 1 0 1 1 1 0 Transposon-encoded protein TnpV Inhibitor_I29 PF08246.12 ORF87784 - 1.4e-06 28.7 3.8 1.8e-06 28.3 3.8 1.2 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF87782 - 0.0038 17.3 0.0 0.0042 17.2 0.0 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Mesd PF10185.9 ORF87635 - 0.0072 16.3 0.0 0.009 16.0 0.0 1.0 1 0 0 1 1 1 1 Chaperone for wingless signalling and trafficking of LDL receptor HTH_5 PF01022.20 ORF87157 - 4.1e-15 55.4 0.1 6.3e-15 54.8 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 ORF87157 - 5.2e-09 35.5 0.0 1.1e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 ORF87157 - 5.8e-09 35.7 0.1 7.8e-09 35.3 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 ORF87157 - 7.2e-08 32.4 0.1 8.6e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 ORF87157 - 3.3e-06 26.9 0.0 5.7e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 ORF87157 - 0.00082 19.1 0.3 0.0011 18.7 0.3 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 ORF87157 - 0.0019 18.1 0.3 0.0035 17.3 0.3 1.5 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 ORF87157 - 0.0067 16.7 0.0 0.014 15.8 0.0 1.5 1 1 1 2 2 2 1 Transcriptional regulator HTH_27 PF13463.6 ORF87157 - 0.024 15.1 0.0 0.031 14.8 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain PaaX PF07848.12 ORF87157 - 0.033 14.4 0.0 0.039 14.2 0.0 1.2 1 0 0 1 1 1 0 PaaX-like protein LexA_DNA_bind PF01726.16 ORF87157 - 0.11 12.3 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 LexA DNA binding domain AbiEi_4 PF13338.6 ORF87157 - 0.15 12.3 0.1 0.22 11.7 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin DUF1388 PF07142.12 ORF87148 - 0.82 9.7 7.3 8.7 6.4 1.8 2.8 3 1 0 3 3 3 0 Repeat of unknown function (DUF1388) Synapsin_C PF02750.14 ORF87051 - 0.19 11.2 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Synapsin, ATP binding domain zf-RING_UBOX PF13445.6 ORF86813 - 0.00055 19.9 0.9 0.001 19.0 0.9 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF86813 - 0.0041 17.0 1.2 0.0077 16.1 1.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF86813 - 0.0041 16.9 2.0 0.0075 16.1 2.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) HATPase_c PF02518.26 ORF86726 - 6.3e-11 42.8 0.0 6.7e-11 42.7 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Metallophos PF00149.28 ORF86420 - 8.8e-05 23.1 0.1 9.6e-05 23.0 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF86420 - 0.0091 15.0 0.0 0.0092 15.0 0.0 1.0 1 0 0 1 1 1 1 PhoD-like phosphatase DUF2164 PF09932.9 ORF86420 - 0.078 13.0 0.1 0.091 12.8 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) GARS_C PF02843.16 ORF86381 - 0.12 12.7 0.1 0.13 12.5 0.1 1.1 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, C domain Uso1_p115_C PF04871.13 ORF85101 - 0.053 13.9 0.5 0.049 14.0 0.5 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Cytochrom_C PF00034.21 ORF84844 - 0.029 15.5 0.0 0.044 14.9 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c Anophelin PF10731.9 ORF84844 - 0.093 12.6 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Thrombin inhibitor from mosquito GST_C_6 PF17171.4 ORF83908 - 0.0087 15.8 0.0 0.012 15.4 0.0 1.4 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Y_phosphatase3 PF13350.6 ORF83723 - 0.52 10.2 1.7 0.61 10.0 1.7 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family CvfB_WH PF17783.1 ORF83358 - 0.022 14.6 1.2 0.036 13.9 1.2 1.6 1 1 0 1 1 1 0 CvfB-like winged helix domain SIS PF01380.22 ORF83250 - 5e-05 23.1 0.2 6.2e-05 22.9 0.2 1.1 1 0 0 1 1 1 1 SIS domain DCX PF03607.17 ORF82898 - 0.0073 16.4 0.1 0.01 15.9 0.1 1.2 1 0 0 1 1 1 1 Doublecortin KH_5 PF13184.6 ORF82898 - 0.022 14.9 0.0 0.029 14.5 0.0 1.2 1 0 0 1 1 1 0 NusA-like KH domain DUF1449 PF07290.11 ORF81916 - 0.068 12.8 0.1 0.074 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1449) HSP70 PF00012.20 ORF80567 - 1.7e-20 72.8 0.2 1.8e-20 72.7 0.2 1.0 1 0 0 1 1 1 1 Hsp70 protein DUF679 PF05078.12 ORF80505 - 0.035 14.1 0.0 0.037 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF679) zf-C2H2_3 PF13878.6 ORF79591 - 0.18 11.6 2.3 6.1 6.8 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO OrfB_Zn_ribbon PF07282.11 ORF79591 - 0.25 11.3 4.0 0.24 11.3 3.4 1.4 1 1 0 1 1 1 0 Putative transposase DNA-binding domain Carla_C4 PF01623.17 ORF79591 - 0.59 10.1 7.9 0.8 9.7 7.9 1.3 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein Glyco_hydro_67C PF07477.12 ORF7901 - 0.043 13.4 0.0 0.043 13.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 C-terminus WW PF00397.26 ORF78635 - 0.033 14.3 11.7 0.84 9.8 0.3 3.2 2 1 1 3 3 3 0 WW domain DUF5113 PF17140.4 ORF78368 - 0.003 17.4 0.1 0.0032 17.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5113) Kelch_3 PF13415.6 ORF78080 - 0.065 13.6 0.2 0.089 13.1 0.2 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain SANT_DAMP1_like PF16282.5 ORF77518 - 0.031 14.5 0.1 0.041 14.1 0.1 1.2 1 0 0 1 1 1 0 SANT/Myb-like domain of DAMP1 CCDC-167 PF15188.6 ORF77518 - 0.032 14.6 1.4 0.039 14.3 1.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 EMC3_TMCO1 PF01956.16 ORF77518 - 0.089 12.5 0.7 0.097 12.4 0.7 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like SMC_N PF02463.19 ORF77454 - 0.0015 18.0 0.1 0.0018 17.8 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Lpp-LpqN PF10738.9 ORF77454 - 0.13 11.8 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Probable lipoprotein LpqN WRW PF10206.9 ORF77137 - 0.082 13.3 0.2 0.1 13.0 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f Imm58 PF15581.6 ORF77061 - 0.00097 19.2 0.0 0.0011 19.0 0.0 1.1 1 0 0 1 1 1 1 Immunity protein 58 SMC_N PF02463.19 ORF77061 - 0.14 11.5 0.4 0.17 11.3 0.4 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Pox_P4B PF03292.14 ORF76397 - 0.033 12.5 0.3 0.033 12.5 0.3 1.0 1 0 0 1 1 1 0 Poxvirus P4B major core protein PBP_sp32 PF07222.12 ORF76282 - 0.016 14.7 0.5 0.02 14.4 0.5 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 BNIP2 PF12496.8 ORF76212 - 0.021 15.2 1.6 0.025 15.0 1.6 1.0 1 0 0 1 1 1 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 DsbC PF11412.8 ORF74883 - 0.17 11.9 0.1 0.25 11.4 0.1 1.5 1 1 0 1 1 1 0 Disulphide bond corrector protein DsbC CAAX_1 PF15895.5 ORF74192 - 0.27 11.1 10.3 0.81 9.6 10.2 1.7 1 1 0 1 1 1 0 CAAX box cerebral protein 1 Imm58 PF15581.6 ORF74189 - 0.011 15.8 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 58 SMC_N PF02463.19 ORF74189 - 0.076 12.4 0.8 0.092 12.2 0.8 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain DUF5326 PF17260.2 ORF74040 - 0.0073 16.4 1.2 0.011 15.9 1.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5326) ELH PF02323.15 ORF74040 - 1.5 8.1 2.4 1.9 7.8 2.4 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor Inhibitor_I29 PF08246.12 ORF73685 - 1.4e-06 28.7 3.8 1.8e-06 28.3 3.8 1.2 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF73683 - 0.0038 17.3 0.0 0.0042 17.2 0.0 1.0 1 0 0 1 1 1 1 Papain family cysteine protease GCR PF02155.15 ORF73624 - 0.047 12.7 0.0 0.047 12.7 0.0 1.1 1 0 0 1 1 1 0 Glucocorticoid receptor BspA_v PF18220.1 ORF73396 - 0.058 13.5 0.3 0.062 13.4 0.3 1.2 1 0 0 1 1 1 0 Adhesin BspA variable domain MapZ_EC1 PF18041.1 ORF73217 - 0.0068 16.6 0.4 2.5 8.4 0.1 2.0 1 1 1 2 2 2 2 MapZ extracellular domain 1 HHV-1_VABD PF16852.5 ORF73191 - 0.044 13.8 5.7 0.044 13.8 5.7 1.8 2 0 0 2 2 2 0 Herpes viral adaptor-to-host cellular mRNA binding domain SLC35F PF06027.12 ORF72587 - 0.015 14.8 0.9 0.015 14.8 0.9 1.0 1 0 0 1 1 1 0 Solute carrier family 35 Pentapeptide PF00805.22 ORF72372 - 1.3e-16 59.9 5.7 2.1e-10 40.1 0.5 2.1 1 1 0 2 2 2 2 Pentapeptide repeats (8 copies) Pentapeptide_3 PF13576.6 ORF72372 - 7.7e-13 48.4 9.6 1.1e-08 35.1 2.2 2.2 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_4 PF13599.6 ORF72372 - 1.2e-11 44.5 4.4 2.7e-11 43.5 4.4 1.5 1 1 0 1 1 1 1 Pentapeptide repeats (9 copies) DUF679 PF05078.12 ORF72372 - 0.066 13.2 0.1 0.073 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF679) TetR_C_2 PF08361.11 ORF72372 - 0.098 12.8 0.1 13 5.9 0.0 2.1 1 1 1 2 2 2 0 MAATS-type transcriptional repressor, C-terminal region DPBB_1 PF03330.18 ORF72131 - 0.089 13.1 0.8 0.13 12.6 0.8 1.4 1 1 0 1 1 1 0 Lytic transglycolase DUF267 PF03268.14 ORF72068 - 0.039 12.8 0.0 0.044 12.6 0.0 1.0 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF267 Antimicrobial_8 PF08103.11 ORF71814 - 0.24 11.6 0.4 0.7 10.1 0.1 1.9 2 0 0 2 2 2 0 Uperin family RbcS PF12338.8 ORF7139 - 0.075 13.2 1.6 11 6.3 0.1 2.4 2 1 0 2 2 2 0 Ribulose-1,5-bisphosphate carboxylase small subunit PBP_sp32 PF07222.12 ORF71187 - 0.016 14.7 0.5 0.02 14.4 0.5 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 NADH_u_ox_C PF12853.7 ORF7116 - 0.084 12.9 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit CH_2 PF06294.11 ORF71120 - 2.6e-26 91.6 0.3 2.9e-26 91.4 0.3 1.0 1 0 0 1 1 1 1 CH-like domain in sperm protein CAMSAP_CH PF11971.8 ORF71120 - 5.4e-13 48.6 0.0 6.2e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 CAMSAP CH domain CH PF00307.31 ORF71120 - 0.01 16.0 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 0 Calponin homology (CH) domain FGAR-AT_linker PF18072.1 ORF71120 - 0.073 13.6 0.0 1.7 9.3 0.0 2.1 1 1 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase linker domain ADP_ribosyl_GH PF03747.14 ORF70688 - 1.3e-10 41.6 0.5 1.5e-10 41.3 0.5 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Peptidase_A21 PF03566.13 ORF70073 - 0.024 12.9 0.0 0.029 12.6 0.0 1.0 1 0 0 1 1 1 0 Peptidase family A21 Pkinase PF00069.25 ORF70065 - 9.4e-32 110.4 0.2 1e-31 110.3 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70065 - 4.7e-17 62.1 0.0 5.1e-17 62.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF70065 - 6.4e-06 25.2 0.0 7e-06 25.1 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF70065 - 0.00032 19.8 0.0 0.00037 19.5 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF70065 - 0.00046 19.6 0.0 0.00054 19.4 0.0 1.1 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF70065 - 0.0012 18.9 0.2 0.0019 18.1 0.1 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF70065 - 0.018 14.4 0.3 0.024 14.0 0.3 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF70065 - 0.1 11.6 0.1 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 zf-DNA_Pol PF08996.10 ORF69981 - 0.011 15.5 0.2 0.012 15.4 0.2 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger EB1_binding PF05937.11 ORF69681 - 0.014 16.0 0.1 0.014 16.0 0.1 1.1 1 0 0 1 1 1 0 EB-1 Binding Domain Fur_reg_FbpA PF13076.6 ORF69552 - 0.062 13.0 0.1 1.6 8.5 0.0 2.5 3 0 0 3 3 3 0 Fur-regulated basic protein A DUF4687 PF15747.5 ORF69251 - 0.067 13.7 0.1 0.076 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4687) DUF1308 PF07000.11 ORF69210 - 0.11 12.4 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1308) MARVEL PF01284.23 ORF69188 - 0.001 19.1 3.5 0.0011 19.0 3.5 1.1 1 0 0 1 1 1 1 Membrane-associating domain 2TM PF13239.6 ORF69188 - 0.016 15.5 4.4 0.019 15.2 4.4 1.1 1 0 0 1 1 1 0 2TM domain Orf78 PF06024.12 ORF69043 - 0.016 15.5 1.6 0.026 14.8 1.6 1.3 1 0 0 1 1 1 0 Orf78 (ac78) DUF3139 PF11337.8 ORF69043 - 0.019 15.6 1.2 0.022 15.4 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) Sperm_Ag_HE2 PF05324.13 ORF68759 - 0.16 12.5 1.1 0.23 11.9 1.1 1.2 1 0 0 1 1 1 0 Sperm antigen HE2 CENP-B_N PF04218.13 ORF66762 - 0.019 14.6 0.1 0.045 13.4 0.0 1.6 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain Clat_adaptor_s PF01217.20 ORF65780 - 0.05 13.5 0.3 0.071 13.1 0.3 1.3 1 0 0 1 1 1 0 Clathrin adaptor complex small chain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks307.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks307.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks307.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks307.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:05:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Somatomedin_B PF01033.17 ORF64822 - 2.3e-14 53.5 33.8 4.1e-08 33.5 13.2 2.1 2 0 0 2 2 2 2 Somatomedin B domain SBF2 PF12335.8 ORF64803 - 0.069 12.8 0.0 0.071 12.7 0.0 1.0 1 0 0 1 1 1 0 Myotubularin protein Alg14 PF08660.11 ORF64761 - 0.1 12.5 1.6 0.11 12.5 1.6 1.0 1 0 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like T6SS_VasJ PF16989.5 ORF64745 - 0.0016 18.0 0.1 0.0019 17.8 0.1 1.0 1 0 0 1 1 1 1 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ TOBE PF03459.17 ORF64605 - 0.045 14.0 0.8 0.1 12.9 0.0 1.9 3 0 0 3 3 3 0 TOBE domain CEBP1_N PF16368.5 ORF64323 - 0.049 13.2 1.6 0.056 13.0 1.6 1.0 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein 1 N-terminus KRBA1 PF15287.6 ORF64268 - 0.11 12.3 4.4 0.44 10.3 0.0 2.3 2 0 0 2 2 2 0 KRBA1 family repeat DUF2855 PF11017.8 ORF63871 - 0.21 11.3 0.1 0.21 11.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) PHR PF08005.12 ORF63814 - 1.4e-09 38.8 0.2 1.5e-09 38.7 0.2 1.0 1 0 0 1 1 1 1 PHR domain S_tail_recep_bd PF14928.6 ORF63814 - 0.063 13.9 0.6 0.074 13.7 0.6 1.2 1 0 0 1 1 1 0 Short tail fibre protein receptor-binding domain Metallophos PF00149.28 ORF63766 - 8.8e-05 23.1 0.1 9.6e-05 23.0 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF63766 - 0.0091 15.0 0.0 0.0092 15.0 0.0 1.0 1 0 0 1 1 1 1 PhoD-like phosphatase DUF2164 PF09932.9 ORF63766 - 0.078 13.0 0.1 0.091 12.8 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) PPR_3 PF13812.6 ORF63008 - 0.00088 19.3 0.0 0.0013 18.8 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain DUF1440 PF07274.12 ORF62725 - 0.0032 17.8 0.6 0.0036 17.6 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1440) DUF72 PF01904.18 ORF62595 - 0.023 14.8 0.3 0.023 14.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF72 CD34_antigen PF06365.12 ORF62528 - 0.15 11.6 0.2 0.18 11.4 0.2 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family KIAA1430 PF13879.6 ORF62347 - 0.0017 19.1 2.3 0.0022 18.7 2.3 1.1 1 0 0 1 1 1 1 KIAA1430 homologue mRNA_stabil PF13929.6 ORF62347 - 0.013 14.5 0.2 0.013 14.5 0.2 1.1 1 0 0 1 1 1 0 mRNA stabilisation Ribosom_S30AE_C PF16321.5 ORF6169 - 0.011 15.4 0.1 0.02 14.5 0.1 1.4 1 0 0 1 1 1 0 Sigma 54 modulation/S30EA ribosomal protein C terminus DUF1539 PF07560.11 ORF61642 - 0.061 13.4 0.5 0.069 13.2 0.5 1.3 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1539) Ribosomal_L38e PF01781.18 ORF61023 - 1.2e-20 73.4 3.2 1.4e-20 73.2 3.2 1.0 1 0 0 1 1 1 1 Ribosomal L38e protein family Zn_ribbon_17 PF17120.5 ORF60939 - 0.026 14.2 2.7 0.033 13.8 2.7 1.1 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-CCCH_2 PF14608.6 ORF60904 - 0.17 12.4 0.6 0.25 11.9 0.6 1.3 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger zf-C2HC PF01530.18 ORF60880 - 0.016 15.4 0.4 0.016 15.4 0.4 1.9 2 0 0 2 2 2 0 Zinc finger, C2HC type iPGM_N PF06415.13 ORF59850 - 0.027 14.0 0.7 0.029 13.8 0.7 1.0 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) DnaB_bind PF10410.9 ORF59850 - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase ROS_MUCR PF05443.11 ORF59790 - 0.081 13.0 0.7 0.083 12.9 0.7 1.1 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein KIAA1430 PF13879.6 ORF59525 - 0.0017 19.1 2.3 0.0022 18.7 2.3 1.1 1 0 0 1 1 1 1 KIAA1430 homologue mRNA_stabil PF13929.6 ORF59525 - 0.013 14.5 0.2 0.013 14.5 0.2 1.1 1 0 0 1 1 1 0 mRNA stabilisation Metallophos PF00149.28 ORF59442 - 8.8e-05 23.1 0.1 9.6e-05 23.0 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF59442 - 0.0091 15.0 0.0 0.0092 15.0 0.0 1.0 1 0 0 1 1 1 1 PhoD-like phosphatase DUF2164 PF09932.9 ORF59442 - 0.078 13.0 0.1 0.091 12.8 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) Ras PF00071.22 ORF59075 - 0.096 12.3 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 Ras family SWIM PF04434.17 ORF58840 - 0.14 11.9 4.1 0.26 11.0 4.1 1.5 1 1 0 1 1 1 0 SWIM zinc finger zf-C3HC4_2 PF13923.6 ORF58476 - 0.073 12.9 0.9 0.31 10.9 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Metallophos PF00149.28 ORF57888 - 8.8e-05 23.1 0.1 9.6e-05 23.0 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF57888 - 0.0091 15.0 0.0 0.0092 15.0 0.0 1.0 1 0 0 1 1 1 1 PhoD-like phosphatase DUF2164 PF09932.9 ORF57888 - 0.078 13.0 0.1 0.091 12.8 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) CREPT PF16566.5 ORF5676 - 0.0059 16.8 1.3 0.0077 16.4 1.0 1.4 1 1 0 1 1 1 1 Cell-cycle alteration and expression-elevated protein in tumour PsbU PF06514.11 ORF5676 - 0.0085 16.1 0.3 0.01 15.8 0.3 1.2 1 0 0 1 1 1 1 Photosystem II 12 kDa extrinsic protein (PsbU) TSC22 PF01166.18 ORF5676 - 0.01 16.1 1.6 0.017 15.4 1.4 1.7 1 1 0 1 1 1 0 TSC-22/dip/bun family Cep57_MT_bd PF06657.13 ORF5676 - 0.02 15.3 0.6 6.6 7.3 0.1 2.1 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 DUF4559 PF15112.6 ORF5676 - 0.02 14.6 1.9 0.021 14.5 1.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Nsp1_C PF05064.13 ORF5676 - 0.022 14.6 0.7 0.026 14.3 0.7 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region ApoLp-III PF07464.11 ORF5676 - 0.029 14.5 3.4 0.034 14.2 3.4 1.0 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) ZapB PF06005.12 ORF5676 - 0.033 14.6 1.9 0.055 13.9 1.9 1.5 1 1 0 1 1 1 0 Cell division protein ZapB ZnuA PF01297.17 ORF5676 - 0.04 13.3 1.6 0.045 13.1 1.6 1.0 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic HAUS6_N PF14661.6 ORF5676 - 0.065 12.8 2.1 0.074 12.6 2.1 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF4407 PF14362.6 ORF5676 - 0.098 12.0 0.6 0.11 11.8 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) VitK2_biosynth PF02621.14 ORF5676 - 0.17 11.4 0.3 0.2 11.1 0.3 1.0 1 0 0 1 1 1 0 Menaquinone biosynthesis Mob_synth_C PF06463.13 ORF56078 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C ACOX PF01756.19 ORF55938 - 0.00074 19.1 0.2 0.00086 18.9 0.2 1.1 1 0 0 1 1 1 1 Acyl-CoA oxidase FixQ PF05545.11 ORF55873 - 0.061 13.3 1.1 0.14 12.1 1.1 1.6 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF21 PF01595.20 ORF55873 - 0.087 12.5 0.3 0.087 12.5 0.3 1.8 1 1 1 2 2 2 0 Cyclin M transmembrane N-terminal domain Glycos_trans_3N PF02885.17 ORF55873 - 0.16 11.8 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain aGPT-Pplase3 PF18746.1 ORF54897 - 0.18 11.1 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 4HBT PF03061.22 ORF54442 - 2.2e-05 24.7 0.0 2.4e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF1539 PF07560.11 ORF53964 - 0.061 13.4 0.5 0.069 13.2 0.5 1.3 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1539) PBP_sp32 PF07222.12 ORF53603 - 0.016 14.7 0.5 0.02 14.4 0.5 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Ribonuc_red_lgC PF02867.15 ORF53111 - 1.2e-09 37.3 0.3 1.5e-09 37.0 0.3 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain DUF2161 PF09929.9 ORF53111 - 0.12 12.5 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 Putative PD-(D/E)XK phosphodiesterase (DUF2161) HATPase_c PF02518.26 ORF52761 - 6.3e-11 42.8 0.0 6.7e-11 42.7 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SURF2 PF05477.11 ORF52538 - 5.7 6.6 10.1 5.9 6.5 10.1 1.1 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) PhdYeFM_antitox PF02604.19 ORF52326 - 0.041 13.7 1.0 0.17 11.7 1.0 1.8 1 1 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system RCC1_2 PF13540.6 ORF51606 - 9.8e-07 28.4 0.0 2.9e-06 26.9 0.0 1.8 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF51606 - 0.0042 17.7 0.7 0.027 15.1 0.1 2.2 2 1 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat DUF4405 PF14358.6 ORF50990 - 0.037 14.6 0.3 0.05 14.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4405) DUF4219 PF13961.6 ORF50686 - 0.1 12.3 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4219) Spy1 PF11357.8 ORF50661 - 0.1 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Cell cycle regulatory protein SBF2 PF12335.8 ORF50522 - 0.069 12.8 0.0 0.071 12.7 0.0 1.0 1 0 0 1 1 1 0 Myotubularin protein DUF5113 PF17140.4 ORF49208 - 0.003 17.4 0.1 0.0032 17.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5113) Peptidase_C54 PF03416.19 ORF4882 - 0.036 13.5 0.0 0.039 13.4 0.0 1.1 1 0 0 1 1 1 0 Peptidase family C54 Leader_Thr PF08254.11 ORF48713 - 1.1 9.1 6.0 2.6 7.9 6.0 1.7 1 0 0 1 1 1 0 Threonine leader peptide Fungal_trans PF04082.18 ORF48070 - 0.036 13.1 0.3 0.037 13.1 0.3 1.1 1 0 0 1 1 1 0 Fungal specific transcription factor domain Imm58 PF15581.6 ORF47709 - 0.011 15.8 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 58 SMC_N PF02463.19 ORF47709 - 0.076 12.4 0.8 0.092 12.2 0.8 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Imm58 PF15581.6 ORF47655 - 0.011 15.8 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 58 SMC_N PF02463.19 ORF47655 - 0.076 12.4 0.8 0.092 12.2 0.8 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain rve PF00665.26 ORF4765 - 5e-05 23.5 0.0 6.5e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF4765 - 0.031 14.1 0.0 0.039 13.7 0.0 1.2 1 0 0 1 1 1 0 Integrase core domain Sars6 PF12133.8 ORF47074 - 0.0087 16.0 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 1 Open reading frame 6 from SARS coronavirus FUSC_2 PF13515.6 ORF47004 - 0.14 12.3 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein-like DUF2492 PF10678.9 ORF46720 - 3.3e-36 123.4 0.1 3.6e-36 123.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2492) Pkinase PF00069.25 ORF45706 - 2e-06 27.4 0.1 2.4e-06 27.1 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain TFIIB PF00382.19 ORF45706 - 0.0087 16.1 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Transcription factor TFIIB repeat Pkinase_Tyr PF07714.17 ORF45706 - 0.016 14.5 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase PapC_C PF13953.6 ORF45427 - 3.8e-24 84.3 0.1 4.5e-24 84.0 0.1 1.1 1 0 0 1 1 1 1 PapC C-terminal domain DUF4519 PF15012.6 ORF45181 - 0.15 12.3 0.2 0.49 10.6 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4519) HD_2 PF12917.7 ORF45124 - 0.1 12.3 9.1 0.13 12.0 9.1 1.0 1 0 0 1 1 1 0 HD containing hydrolase-like enzyme Pox_A_type_inc PF04508.12 ORF45124 - 0.33 10.9 4.5 2.3 8.2 0.2 3.4 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat DUF3584 PF12128.8 ORF45124 - 0.6 7.5 14.5 0.62 7.5 14.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ZYG-11_interact PF05884.12 ORF45124 - 0.6 9.5 2.7 0.6 9.5 2.7 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 DUF4407 PF14362.6 ORF45124 - 0.77 9.1 10.2 0.84 8.9 10.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PNPase PF03726.14 ORF45124 - 1.4 9.4 10.6 1.8 9.1 10.6 1.3 1 1 0 1 1 1 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain DUF2407_C PF13373.6 ORF45124 - 1.4 9.0 4.5 1.6 8.9 4.5 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain DUF4337 PF14235.6 ORF45124 - 2.6 8.2 16.1 2.8 8.1 16.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4554 PF15091.6 ORF45124 - 2.9 6.7 8.0 3.3 6.5 8.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) Phage_lysis PF03245.13 ORF45124 - 3.7 7.7 11.9 6.1 7.0 1.9 2.1 1 1 1 2 2 2 0 Bacteriophage Rz lysis protein VPS38 PF17649.1 ORF45124 - 6.3 5.5 13.7 6.3 5.6 13.7 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting 38 DivIC PF04977.15 ORF45124 - 9 6.2 14.3 44 3.9 14.3 2.2 1 1 0 1 1 1 0 Septum formation initiator DUF3450 PF11932.8 ORF45124 - 9.4 5.5 13.4 9.8 5.4 13.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) vATP-synt_E PF01991.18 ORF44333 - 8.2e-14 51.5 0.0 8.9e-14 51.4 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit Ank_4 PF13637.6 ORF43870 - 8.2e-09 35.8 0.0 1.1e-08 35.4 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF43870 - 8e-07 29.2 0.0 0.01 16.2 0.1 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF43870 - 1.6e-06 28.6 0.1 1.8e-06 28.4 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF43870 - 2.1e-05 24.7 1.1 0.0039 17.5 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF43870 - 0.00015 21.9 0.0 0.088 13.4 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat Rv2175c_C PF18367.1 ORF43870 - 0.075 13.1 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Rv2175c C-terminal domain of unknown function DMA PF03474.14 ORF43661 - 0.1 12.2 0.2 0.23 11.1 0.1 1.8 2 1 0 2 2 2 0 DMRTA motif Peptidase_C1 PF00112.23 ORF43324 - 0.0038 17.3 0.0 0.0042 17.2 0.0 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF43322 - 1.4e-06 28.7 3.8 1.8e-06 28.3 3.8 1.2 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) N-Term_TEN PF11474.8 ORF43311 - 0.0032 17.1 2.2 0.004 16.8 2.0 1.3 1 1 0 1 1 1 1 Telomerase reverse transcriptase TEN domain SYS1 PF09801.9 ORF43137 - 0.016 15.4 0.1 0.022 14.9 0.1 1.2 1 0 0 1 1 1 0 Integral membrane protein S linking to the trans Golgi network ComS PF17584.2 ORF42960 - 0.33 10.5 4.4 0.37 10.3 3.6 1.5 1 1 0 1 1 1 0 Bacillus competence protein S DUF5314 PF17241.2 ORF42805 - 0.017 14.8 1.0 0.021 14.5 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5314) Flu_M1 PF00598.19 ORF42647 - 0.11 11.9 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Influenza Matrix protein (M1) PapC_C PF13953.6 ORF42425 - 5.9e-27 93.3 0.0 7.6e-27 92.9 0.0 1.1 1 0 0 1 1 1 1 PapC C-terminal domain Nodulin_late PF07127.11 ORF41426 - 0.054 13.8 0.2 0.081 13.3 0.2 1.3 1 0 0 1 1 1 0 Late nodulin protein PID_2 PF14719.6 ORF41284 - 0.026 14.4 0.7 0.027 14.3 0.7 1.1 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) YbaB_DNA_bd PF02575.16 ORF40927 - 0.0012 19.0 1.0 0.0015 18.7 1.0 1.2 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family ParB PF08775.10 ORF40927 - 0.089 13.3 3.0 0.096 13.2 3.0 1.1 1 0 0 1 1 1 0 ParB family UL2 PF08196.11 ORF40891 - 0.1 12.5 0.1 0.24 11.4 0.0 1.6 2 0 0 2 2 2 0 UL2 protein YjcB PF15940.5 ORF40516 - 0.018 15.2 0.3 0.023 14.9 0.3 1.3 1 1 0 1 1 1 0 Family of unknown function Proteasome PF00227.26 ORF40485 - 0.027 14.0 0.0 0.034 13.6 0.0 1.2 1 0 0 1 1 1 0 Proteasome subunit PTase_Orf2 PF11468.8 ORF40485 - 0.17 11.3 0.0 0.18 11.2 0.0 1.0 1 0 0 1 1 1 0 Aromatic prenyltransferase Orf2 NSP11 PF06471.12 ORF40382 - 0.14 10.6 1.0 0.14 10.6 1.0 1.0 1 0 0 1 1 1 0 NSP11 DUF4825 PF16107.5 ORF40377 - 0.086 13.0 1.5 0.097 12.8 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4825) DsbC PF11412.8 ORF39988 - 0.17 11.9 0.1 0.25 11.4 0.1 1.5 1 1 0 1 1 1 0 Disulphide bond corrector protein DsbC PCP_red PF08369.10 ORF3994 - 0.13 12.5 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Proto-chlorophyllide reductase 57 kD subunit Vif PF00559.17 ORF39917 - 0.094 12.4 0.0 0.094 12.4 0.0 1.1 1 0 0 1 1 1 0 Retroviral Vif (Viral infectivity) protein tRNA_synt_1c_R2 PF04557.15 ORF39803 - 0.14 13.1 4.4 0.17 12.9 4.4 1.1 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 Pkinase PF00069.25 ORF39577 - 9.4e-32 110.4 0.2 1e-31 110.3 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39577 - 4.7e-17 62.1 0.0 5.1e-17 62.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF39577 - 6.4e-06 25.2 0.0 7e-06 25.1 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF39577 - 0.00032 19.8 0.0 0.00037 19.5 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF39577 - 0.00046 19.6 0.0 0.00054 19.4 0.0 1.1 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF39577 - 0.0012 18.9 0.2 0.0019 18.1 0.1 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF39577 - 0.018 14.4 0.3 0.024 14.0 0.3 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF39577 - 0.1 11.6 0.1 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Metallophos PF00149.28 ORF39283 - 8.8e-05 23.1 0.1 9.6e-05 23.0 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF39283 - 0.0091 15.0 0.0 0.0092 15.0 0.0 1.0 1 0 0 1 1 1 1 PhoD-like phosphatase DUF2164 PF09932.9 ORF39283 - 0.078 13.0 0.1 0.091 12.8 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) p31comet PF06581.12 ORF39015 - 0.047 12.8 0.6 0.055 12.6 0.6 1.0 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding DUF2576 PF10845.8 ORF38892 - 0.13 11.9 0.3 0.22 11.1 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) AAA_8 PF12780.7 ORF38845 - 0.05 12.9 0.1 0.053 12.8 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 Mustang PF15682.5 ORF38632 - 0.068 13.3 2.0 0.11 12.6 2.0 1.4 1 0 0 1 1 1 0 Musculoskeletal, temporally activated-embryonic nuclear protein 1 T-box_assoc PF16176.5 ORF38632 - 1.5 8.8 6.4 1.9 8.5 6.4 1.0 1 0 0 1 1 1 0 T-box transcription factor-associated CCD48 PF15799.5 ORF37612 - 0.043 12.1 2.6 0.046 12.0 2.6 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 Inhibitor_I29 PF08246.12 ORF37612 - 0.064 13.7 4.5 0.086 13.3 4.5 1.2 1 0 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) FUSC PF04632.12 ORF37386 - 0.081 11.5 1.8 0.086 11.4 1.8 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF3979 PF13141.6 ORF37167 - 0.054 13.8 0.0 0.063 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) DUF4825 PF16107.5 ORF36938 - 0.086 13.0 1.5 0.097 12.8 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4825) NSP11 PF06471.12 ORF36933 - 0.14 10.6 1.0 0.14 10.6 1.0 1.0 1 0 0 1 1 1 0 NSP11 MmgE_PrpD PF03972.14 ORF36693 - 0.19 10.2 0.0 0.21 10.1 0.0 1.1 1 0 0 1 1 1 0 MmgE/PrpD family MYEOV2 PF15004.6 ORF36570 - 0.024 15.0 0.1 0.031 14.7 0.1 1.3 1 0 0 1 1 1 0 Myeloma-overexpressed-like His_kinase PF06580.13 ORF36570 - 0.08 13.3 0.0 0.13 12.6 0.0 1.3 1 1 0 1 1 1 0 Histidine kinase PHR PF08005.12 ORF36326 - 2.4e-09 38.0 0.8 3e-09 37.7 0.8 1.2 1 0 0 1 1 1 1 PHR domain THEG PF14912.6 ORF36092 - 0.083 13.4 0.1 0.13 12.8 0.1 1.3 1 0 0 1 1 1 0 Testicular haploid expressed repeat zf-DNA_Pol PF08996.10 ORF35736 - 0.011 15.5 0.2 0.012 15.4 0.2 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger PfkB PF00294.24 ORF35579 - 4.1e-12 46.0 0.3 4.6e-12 45.8 0.3 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase DUF2717 PF10911.8 ORF35579 - 0.14 11.9 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2717) Otopetrin PF03189.13 ORF35471 - 0.057 12.2 0.1 0.063 12.1 0.1 1.1 1 0 0 1 1 1 0 Otopetrin RGCC PF15151.6 ORF35207 - 0.16 12.2 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Response gene to complement 32 protein family Peptidase_M48 PF01435.18 ORF34723 - 1.2e-12 48.0 0.0 1.4e-12 47.8 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M48 DUF4835 PF16119.5 ORF34723 - 0.055 12.6 0.0 0.055 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4835) DUF679 PF05078.12 ORF34661 - 0.035 14.1 0.0 0.037 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF679) Hydrolase_4 PF12146.8 ORF34446 - 0.0044 16.3 0.0 0.0048 16.2 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Asp2 PF16929.5 ORF34446 - 0.017 14.1 0.0 0.017 14.1 0.0 1.0 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter MIT PF04212.18 ORF3432 - 0.0026 17.8 3.8 0.0034 17.4 3.8 1.3 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain TMF_DNA_bd PF12329.8 ORF3432 - 0.011 15.8 6.5 0.011 15.8 6.5 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Calpain_inhib PF00748.19 ORF3432 - 0.029 14.9 1.7 0.034 14.6 1.7 1.1 1 0 0 1 1 1 0 Calpain inhibitor DUF334 PF03904.13 ORF3432 - 0.033 13.7 10.5 0.037 13.6 10.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) Phage_GP20 PF06810.11 ORF3432 - 0.035 13.9 10.7 0.038 13.8 10.7 1.1 1 0 0 1 1 1 0 Phage minor structural protein GP20 HAUS6_N PF14661.6 ORF3432 - 0.14 11.7 4.6 0.14 11.7 4.6 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus PP2C_C PF07830.13 ORF3432 - 0.15 12.5 5.0 0.07 13.6 2.2 1.7 1 1 1 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain Prominin PF05478.11 ORF3432 - 0.25 9.2 5.8 0.26 9.2 5.8 1.0 1 0 0 1 1 1 0 Prominin DUF4446 PF14584.6 ORF3432 - 0.43 10.5 5.3 0.51 10.3 5.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) YabA PF06156.13 ORF3432 - 0.52 11.0 7.8 0.19 12.4 2.2 2.0 1 1 1 2 2 2 0 Initiation control protein YabA LMBR1 PF04791.16 ORF3432 - 0.79 8.6 5.3 0.84 8.5 5.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Iron_permease PF04120.12 ORF3432 - 1.4 8.7 6.4 2.9 7.7 6.4 1.5 1 1 0 1 1 1 0 Low affinity iron permease DUF4145 PF13643.6 ORF3432 - 4 7.6 6.1 56 4.0 6.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4145) 7TM_GPCR_Srsx PF10320.9 ORF33419 - 0.12 11.7 0.0 0.14 11.5 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srsx 7TM_GPCR_Srsx PF10320.9 ORF33417 - 0.12 11.7 0.0 0.14 11.5 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srsx DUF2733 PF10813.8 ORF33123 - 0.056 13.2 0.1 0.083 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) Romo1 PF10247.9 ORF32536 - 0.029 14.7 0.1 0.041 14.2 0.1 1.3 1 0 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 HEV_ORF1 PF02444.16 ORF32433 - 0.11 13.1 2.4 0.13 12.8 2.4 1.1 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) iPGM_N PF06415.13 ORF32119 - 0.027 14.0 0.7 0.029 13.8 0.7 1.0 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) DnaB_bind PF10410.9 ORF32119 - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase Furin-like PF00757.20 ORF32095 - 0.014 15.3 0.2 0.016 15.1 0.2 1.0 1 0 0 1 1 1 0 Furin-like cysteine rich region DUF2062 PF09835.9 ORF31865 - 0.0072 16.2 0.9 0.0089 15.9 0.9 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) DUF3377 PF11857.8 ORF31865 - 0.16 11.9 0.2 0.19 11.7 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) Hydrolase_4 PF12146.8 ORF3168 - 0.0044 16.3 0.0 0.0048 16.2 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Asp2 PF16929.5 ORF3168 - 0.017 14.1 0.0 0.017 14.1 0.0 1.0 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter BRCT PF00533.26 ORF31657 - 0.013 15.9 0.0 0.021 15.2 0.0 1.3 1 1 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain RskA PF10099.9 ORF31321 - 0.012 16.0 1.6 0.013 15.8 1.6 1.0 1 0 0 1 1 1 0 Anti-sigma-K factor rskA LSM PF01423.22 ORF3023 - 1e-18 66.7 0.5 1.2e-18 66.5 0.5 1.0 1 0 0 1 1 1 1 LSM domain Ank_2 PF12796.7 ORF29346 - 0.015 15.9 0.0 0.017 15.7 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) ENTH PF01417.20 ORF29346 - 0.036 14.1 0.2 0.04 14.0 0.2 1.1 1 0 0 1 1 1 0 ENTH domain Ank_4 PF13637.6 ORF29346 - 0.068 13.8 0.0 0.1 13.2 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) PsbR PF04725.12 ORF29346 - 0.07 13.5 0.1 0.096 13.0 0.1 1.3 1 1 0 1 1 1 0 Photosystem II 10 kDa polypeptide PsbR Inhibitor_I78 PF11720.8 ORF27647 - 0.041 14.0 0.0 0.048 13.7 0.0 1.1 1 0 0 1 1 1 0 Peptidase inhibitor I78 family mCpol PF18182.1 ORF27099 - 0.17 12.2 0.0 0.19 12.1 0.0 1.1 1 0 0 1 1 1 0 minimal CRISPR polymerase domain C_tripleX PF02363.19 ORF26591 - 0.06 13.6 7.1 0.14 12.4 7.1 1.7 1 0 0 1 1 1 0 Cysteine rich repeat RP-C_C PF11800.8 ORF24955 - 0.0045 17.1 1.6 0.0046 17.1 1.6 1.0 1 0 0 1 1 1 1 Replication protein C C-terminal region DUF3116 PF11313.8 ORF24955 - 0.011 15.6 1.8 0.012 15.5 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) Cas_Cmr5 PF09701.10 ORF24955 - 0.041 14.2 4.3 0.053 13.8 4.3 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr5) DUF1104 PF06518.11 ORF24955 - 0.84 10.0 8.4 1.3 9.4 8.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1104) SPARC_Ca_bdg PF10591.9 ORF24955 - 1 9.7 6.1 1.6 9.0 6.0 1.4 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region ABC_membrane_3 PF13748.6 ORF24616 - 0.12 11.6 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region Transglut_N PF00868.20 ORF23163 - 0.063 13.6 0.0 0.073 13.4 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase family ANP PF00212.18 ORF22875 - 0.023 14.9 1.5 4.4 7.6 0.3 2.3 2 0 0 2 2 2 0 Atrial natriuretic peptide Calc_CGRP_IAPP PF00214.19 ORF2286 - 0.034 14.5 0.5 0.037 14.4 0.5 1.2 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family DUF4191 PF13829.6 ORF22804 - 0.53 9.6 3.0 0.64 9.3 3.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Proton_antipo_N PF00662.20 ORF22804 - 6.2 7.0 7.1 6.5 6.9 2.4 2.1 2 0 0 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ArsD PF06953.11 ORF22090 - 0.009 16.4 0.2 0.0098 16.2 0.2 1.1 1 0 0 1 1 1 1 Arsenical resistance operon trans-acting repressor ArsD SWIB PF02201.18 ORF22090 - 0.03 14.2 3.0 0.96 9.4 0.2 2.1 1 1 1 2 2 2 0 SWIB/MDM2 domain zf-C2H2_3 PF13878.6 ORF22034 - 0.18 11.6 2.3 6.1 6.8 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO OrfB_Zn_ribbon PF07282.11 ORF22034 - 0.25 11.3 4.0 0.24 11.3 3.4 1.4 1 1 0 1 1 1 0 Putative transposase DNA-binding domain Carla_C4 PF01623.17 ORF22034 - 0.59 10.1 7.9 0.8 9.7 7.9 1.3 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein ATP-synt_C PF00137.21 ORF20682 - 1.2e-09 38.3 10.7 1.6e-09 37.9 10.6 1.3 1 1 0 1 1 1 1 ATP synthase subunit C HlyIII PF03006.20 ORF20682 - 0.024 14.4 0.4 0.028 14.1 0.4 1.2 1 0 0 1 1 1 0 Haemolysin-III related vATP-synt_E PF01991.18 ORF20396 - 8.2e-14 51.5 0.0 8.9e-14 51.4 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit RNA_pol_Rpb2_2 PF04561.14 ORF1995 - 0.022 14.4 0.1 0.024 14.3 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 2 Mito_carr PF00153.27 ORF19419 - 7.6e-10 38.6 0.0 8.7e-10 38.4 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein CAP_N PF01213.19 ORF19353 - 5.2 6.5 9.1 5.8 6.3 9.1 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Actin PF00022.19 ORF18385 - 9.1e-09 34.4 0.0 9.9e-09 34.3 0.0 1.0 1 0 0 1 1 1 1 Actin GCR PF02155.15 ORF18320 - 0.047 12.7 0.0 0.047 12.7 0.0 1.1 1 0 0 1 1 1 0 Glucocorticoid receptor Suppressor_P21 PF11479.8 ORF17758 - 0.14 12.3 0.1 0.17 12.1 0.1 1.2 1 0 0 1 1 1 0 RNA silencing suppressor P21 C-terminal domain MARVEL PF01284.23 ORF17667 - 0.001 19.1 3.5 0.0011 19.0 3.5 1.1 1 0 0 1 1 1 1 Membrane-associating domain 2TM PF13239.6 ORF17667 - 0.016 15.5 4.4 0.019 15.2 4.4 1.1 1 0 0 1 1 1 0 2TM domain vATP-synt_E PF01991.18 ORF17342 - 8.2e-14 51.5 0.0 8.9e-14 51.4 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit Trp_Tyr_perm PF03222.13 ORF17259 - 0.042 12.9 0.0 0.051 12.6 0.0 1.1 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family HATPase_c PF02518.26 ORF17107 - 6.3e-11 42.8 0.0 6.7e-11 42.7 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toxin_14 PF07829.11 ORF16928 - 0.048 13.6 3.3 0.1 12.6 3.3 1.5 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein DNA_pol_P_Exo PF18049.1 ORF16303 - 0.068 12.6 0.0 0.07 12.5 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase nu pseudo-exo Conotoxin PF02950.17 ORF1624 - 0.03 15.3 0.0 0.041 14.9 0.0 1.1 1 0 0 1 1 1 0 Conotoxin Bradykinin PF06753.12 ORF16089 - 8.5 6.2 11.1 3.3 7.5 0.1 3.0 2 1 0 2 2 2 0 Bradykinin Atg8 PF02991.16 ORF15924 - 2.1e-21 76.1 0.2 2.3e-21 75.9 0.2 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF15924 - 0.00089 19.6 0.1 0.00095 19.5 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 DUF2857 PF11198.8 ORF14993 - 0.042 13.6 0.0 0.05 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) CathepsinC_exc PF08773.11 ORF14993 - 0.08 13.2 0.2 0.087 13.1 0.2 1.1 1 0 0 1 1 1 0 Cathepsin C exclusion domain DUF4252 PF14060.6 ORF149 - 0.013 15.4 0.2 0.016 15.1 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) OSK PF17182.4 ORF14831 - 0.27 10.4 1.6 0.28 10.4 1.6 1.1 1 0 0 1 1 1 0 OSK domain DUF908 PF06012.12 ORF13709 - 0.088 12.2 0.2 0.092 12.1 0.2 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) zf-RING_9 PF13901.6 ORF13538 - 0.045 13.7 0.4 0.051 13.5 0.4 1.0 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon DUF2748 PF10871.8 ORF13538 - 0.051 12.2 1.8 0.053 12.1 1.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2748) zf-DNA_Pol PF08996.10 ORF1193 - 0.011 15.5 0.2 0.012 15.4 0.2 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger DMT_YdcZ PF04657.13 ORF11434 - 0.00019 21.7 0.0 0.00024 21.4 0.0 1.1 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ PHR PF08005.12 ORF112169 - 1.5e-06 29.0 1.2 5.2e-06 27.2 1.0 1.8 1 1 0 1 1 1 1 PHR domain DnaJ_C PF01556.18 ORF110524 - 3.3e-18 66.2 0.1 3.6e-18 66.1 0.1 1.0 1 0 0 1 1 1 1 DnaJ C terminal domain Ycf1 PF05758.12 ORF110217 - 0.15 9.9 1.3 0.18 9.6 1.3 1.0 1 0 0 1 1 1 0 Ycf1 Metallophos PF00149.28 ORF109764 - 8.8e-05 23.1 0.1 9.6e-05 23.0 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF109764 - 0.0091 15.0 0.0 0.0092 15.0 0.0 1.0 1 0 0 1 1 1 1 PhoD-like phosphatase DUF2164 PF09932.9 ORF109764 - 0.078 13.0 0.1 0.091 12.8 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) DUF4501 PF14946.6 ORF10974 - 0.028 14.5 5.0 0.029 14.5 5.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Romo1 PF10247.9 ORF109045 - 0.029 14.7 0.1 0.041 14.2 0.1 1.3 1 0 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 MmoB_DmpM PF02406.17 ORF10883 - 0.071 13.3 0.8 0.082 13.1 0.8 1.3 1 0 0 1 1 1 0 MmoB/DmpM family COX6B PF02297.17 ORF108246 - 2.5e-13 50.0 2.0 2.8e-13 49.9 2.0 1.0 1 0 0 1 1 1 1 Cytochrome oxidase c subunit VIb zf-DNA_Pol PF08996.10 ORF108120 - 0.011 15.5 0.2 0.012 15.4 0.2 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger Kelch_6 PF13964.6 ORF108077 - 4.4e-06 26.8 0.1 0.0013 18.9 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF108077 - 9.4e-06 25.1 1.3 0.0075 15.8 0.1 2.7 2 1 0 2 2 2 2 Kelch motif CID_GANP PF16766.5 ORF107922 - 0.066 13.4 0.4 0.12 12.6 0.4 1.3 1 0 0 1 1 1 0 Binding region of GANP to ENY2 DnaJ_CXXCXGXG PF00684.19 ORF107880 - 0.075 13.4 6.4 0.11 12.9 6.4 1.3 1 0 0 1 1 1 0 DnaJ central domain Noelin-1 PF12308.8 ORF107626 - 0.0015 18.5 0.3 0.0032 17.4 0.2 1.5 1 1 1 2 2 2 1 Neurogenesis glycoprotein FlxA PF14282.6 ORF107626 - 0.02 14.9 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 FlxA-like protein Tropomyosin PF00261.20 ORF107626 - 0.057 12.8 0.3 0.07 12.5 0.3 1.2 1 0 0 1 1 1 0 Tropomyosin NPV_P10 PF05531.12 ORF107626 - 0.1 13.1 0.2 0.6 10.6 0.2 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ROS_MUCR PF05443.11 ORF107622 - 0.081 13.0 0.7 0.083 12.9 0.7 1.1 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein Tmemb_18A PF09771.9 ORF107226 - 0.019 15.4 0.6 0.023 15.1 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein 188 Flavi_NS4A PF01350.17 ORF107226 - 0.15 12.0 2.1 0.17 11.8 2.1 1.1 1 0 0 1 1 1 0 Flavivirus non-structural protein NS4A Cmc1 PF08583.10 ORF106983 - 0.00048 20.1 1.1 0.00056 19.9 1.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase biogenesis protein Cmc1 like Mgm101p PF06420.12 ORF106983 - 0.0048 16.5 0.1 0.0052 16.3 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial genome maintenance MGM101 GCK PF07802.11 ORF106983 - 0.0073 16.7 5.1 0.0097 16.3 5.1 1.1 1 0 0 1 1 1 1 GCK domain UPF0203 PF05254.12 ORF106983 - 0.1 12.9 5.2 0.43 10.9 0.3 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0203) COX17 PF05051.13 ORF106983 - 0.18 12.2 5.9 1.3 9.4 0.4 2.1 1 1 1 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) CX9C PF16860.5 ORF106983 - 0.32 11.1 7.1 0.76 9.8 7.2 1.5 1 1 1 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, CHCH PF06747.13 ORF106983 - 1.7 8.9 10.4 13 6.0 10.4 2.0 1 1 0 1 1 1 0 CHCH domain HisKA_2 PF07568.12 ORF106341 - 0.053 13.6 0.2 0.08 13.0 0.2 1.3 1 0 0 1 1 1 0 Histidine kinase Transp_cyt_pur PF02133.15 ORF106256 - 0.11 11.2 0.1 0.12 11.1 0.1 1.0 1 0 0 1 1 1 0 Permease for cytosine/purines, uracil, thiamine, allantoin SMC_N PF02463.19 ORF105306 - 0.023 14.2 0.3 0.028 13.9 0.3 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Imm58 PF15581.6 ORF105306 - 0.062 13.4 0.0 0.071 13.2 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 58 MDFI PF15316.6 ORF104162 - 0.033 14.3 0.1 0.037 14.1 0.1 1.0 1 0 0 1 1 1 0 MyoD family inhibitor Ysc84 PF04366.12 ORF103874 - 0.088 12.6 0.2 0.21 11.3 0.0 1.6 1 1 1 2 2 2 0 Las17-binding protein actin regulator PTEN_C2 PF10409.9 ORF103862 - 0.2 11.4 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein iPGM_N PF06415.13 ORF102965 - 0.027 14.0 0.7 0.029 13.8 0.7 1.0 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) DnaB_bind PF10410.9 ORF102965 - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase Kelch_3 PF13415.6 ORF10295 - 0.065 13.6 0.2 0.089 13.1 0.2 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain Peripla_BP_3 PF13377.6 ORF10277 - 3.7e-07 30.6 0.0 4.1e-07 30.5 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Phosducin PF02114.16 ORF1025 - 0.29 10.0 5.5 0.3 10.0 5.5 1.1 1 0 0 1 1 1 0 Phosducin FYVE_2 PF02318.16 ORF1025 - 0.6 10.3 5.8 0.74 10.0 5.5 1.3 1 1 0 1 1 1 0 FYVE-type zinc finger EMC3_TMCO1 PF01956.16 ORF1025 - 2.7 7.7 7.0 7.6 6.2 7.0 1.7 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DNA_ligase_aden PF01653.18 ORF101606 - 0.013 14.6 0.0 0.013 14.6 0.0 1.0 1 0 0 1 1 1 0 NAD-dependent DNA ligase adenylation domain Tfb2_C PF18307.1 ORF100694 - 2.7e-07 30.9 0.0 3.1e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Tfb2 (p52) C-terminal domain DUF2722 PF10846.8 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 0.15 11.0 13.8 0.15 11.0 13.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) DUF4834 PF16118.5 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 0.26 12.3 4.5 0.29 12.1 4.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4770 PF15994.5 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 0.49 10.6 9.4 0.53 10.5 9.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) Spt20 PF12090.8 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 0.5 9.9 19.8 0.5 9.9 19.8 1.0 1 0 0 1 1 1 0 Spt20 family Activator_LAG-3 PF11498.8 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 0.81 8.6 21.7 0.88 8.5 21.7 1.0 1 0 0 1 1 1 0 Transcriptional activator LAG-3 TFIIA PF03153.13 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 1.8 8.4 17.2 1.9 8.4 17.2 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Presenilin PF01080.17 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 2.1 7.0 5.5 2 7.1 5.5 1.0 1 0 0 1 1 1 0 Presenilin Androgen_recep PF02166.16 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 2.7 6.7 15.5 2.8 6.7 15.5 1.1 1 0 0 1 1 1 0 Androgen receptor Roughex PF06020.11 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 4 6.4 8.2 4.1 6.4 8.2 1.0 1 0 0 1 1 1 0 Drosophila roughex protein SLATT_1 PF18181.1 NODE_68398_length_232_cov_0.923858_g60457_i0forward_frame_1 - 0.018 14.9 3.7 0.02 14.8 3.7 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 PDEase_I PF00233.19 NODE_68391_length_232_cov_1.015228_g60450_i0forward_frame_1 - 0.088 12.5 0.2 0.089 12.5 0.2 1.1 1 0 0 1 1 1 0 3'5'-cyclic nucleotide phosphodiesterase UbiD PF01977.16 NODE_68386_length_232_cov_1.111675_g60445_i0reverse_frame_1 - 0.22 10.3 0.0 0.23 10.3 0.0 1.0 1 0 0 1 1 1 0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DUF2284 PF10050.9 NODE_68382_length_232_cov_1.152284_g60441_i0forward_frame_1 - 0.04 13.6 1.0 0.051 13.3 1.0 1.1 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) DDE_3 PF13358.6 NODE_68377_length_232_cov_1.203046_g60436_i0reverse_frame_1 - 0.14 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease Pyr_redox_2 PF07992.14 NODE_68372_length_232_cov_1.213198_g60431_i0reverse_frame_1 - 0.026 13.7 0.0 0.026 13.7 0.0 1.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MPS-4 PF17523.2 NODE_68360_length_232_cov_1.228426_g60419_i0forward_frame_1 - 0.031 14.4 0.7 0.031 14.4 0.7 1.9 1 1 1 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Pentapeptide PF00805.22 NODE_68356_length_232_cov_1.284264_g60415_i0reverse_frame_1 - 0.013 15.1 0.0 0.016 14.8 0.0 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (8 copies) Nucleoporin_FG PF13634.6 NODE_68354_length_232_cov_1.350254_g60413_i0reverse_frame_1 - 0.4 11.6 9.1 1.1 10.2 9.1 1.7 1 1 0 1 1 1 0 Nucleoporin FG repeat region Caleosin PF05042.13 NODE_68347_length_232_cov_1.406091_g60406_i0reverse_frame_1 - 0.14 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Caleosin related protein ALMT PF11744.8 NODE_68344_length_232_cov_1.421320_g60403_i0forward_frame_1 - 0.064 12.1 1.1 0.11 11.3 0.2 1.6 1 1 1 2 2 2 0 Aluminium activated malate transporter zf-UBR PF02207.20 NODE_68337_length_232_cov_1.538071_g60396_i0reverse_frame_1 - 1.7e-09 37.7 1.4 2.1e-09 37.4 1.1 1.3 1 1 0 1 1 1 1 Putative zinc finger in N-recognin (UBR box) Abhydrolase_2 PF02230.16 NODE_68337_length_232_cov_1.538071_g60396_i0forward_frame_1 - 0.068 13.0 0.1 0.069 12.9 0.1 1.0 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase CAMSAP_CKK PF08683.11 NODE_68337_length_232_cov_1.538071_g60396_i0forward_frame_1 - 0.11 12.6 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Microtubule-binding calmodulin-regulated spectrin-associated RAC_head PF16717.5 NODE_68329_length_232_cov_1.583756_g60388_i0forward_frame_1 - 0.045 14.7 0.1 0.05 14.6 0.1 1.1 1 0 0 1 1 1 0 Ribosome-associated complex head domain Pkinase PF00069.25 NODE_68328_length_232_cov_1.604061_g60387_i0reverse_frame_1 - 8.7e-11 41.7 0.1 9e-11 41.6 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_68328_length_232_cov_1.604061_g60387_i0reverse_frame_1 - 5.9e-07 29.0 0.1 6.5e-07 28.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase SPC22 PF04573.12 NODE_68320_length_232_cov_1.624365_g60379_i0forward_frame_1 - 0.053 13.0 0.1 0.061 12.8 0.1 1.0 1 0 0 1 1 1 0 Signal peptidase subunit RE_HaeIII PF09556.10 NODE_68314_length_232_cov_1.664975_g60373_i0reverse_frame_1 - 0.072 12.2 0.0 0.075 12.1 0.0 1.0 1 0 0 1 1 1 0 HaeIII restriction endonuclease MORN PF02493.20 NODE_68310_length_232_cov_1.685279_g60369_i0reverse_frame_1 - 6.4e-08 32.0 10.4 0.004 17.0 0.2 3.5 4 0 0 4 4 4 3 MORN repeat DUF1304 PF06993.12 NODE_68295_length_232_cov_1.822335_g60354_i0forward_frame_1 - 0.15 12.1 0.0 0.42 10.6 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1304) eIF-3_zeta PF05091.12 NODE_68294_length_232_cov_1.827411_g60353_i0reverse_frame_1 - 1.1e-09 37.9 0.6 1.1e-09 37.8 0.6 1.0 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) PAPA-1 PF04795.12 NODE_68288_length_232_cov_1.888325_g60347_i0forward_frame_1 - 0.032 15.0 1.0 0.041 14.7 1.0 1.2 1 0 0 1 1 1 0 PAPA-1-like conserved region CENP-X PF09415.10 NODE_68288_length_232_cov_1.888325_g60347_i0forward_frame_1 - 0.47 10.8 3.1 14 6.0 0.3 2.1 1 1 1 2 2 2 0 CENP-S associating Centromere protein X Ral PF11058.8 NODE_68286_length_232_cov_1.903553_g60345_i0forward_frame_1 - 0.082 12.5 0.2 0.13 11.9 0.2 1.3 1 0 0 1 1 1 0 Antirestriction protein Ral Pil1 PF13805.6 NODE_68285_length_232_cov_1.908629_g60344_i0reverse_frame_1 - 0.11 11.9 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Eisosome component PIL1 CD36 PF01130.21 NODE_68281_length_232_cov_2.065990_g60340_i0forward_frame_1 - 0.24 9.9 0.0 0.25 9.8 0.0 1.0 1 0 0 1 1 1 0 CD36 family Tubulin PF00091.25 NODE_68278_length_232_cov_2.096447_g60337_i0reverse_frame_1 - 2.2e-09 37.8 0.3 2.6e-09 37.6 0.3 1.1 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Proteasome_A_N PF10584.9 NODE_68277_length_232_cov_2.192893_g60336_i0reverse_frame_1 - 0.064 13.0 0.0 0.088 12.5 0.0 1.2 1 0 0 1 1 1 0 Proteasome subunit A N-terminal signature Swm2 PF17083.5 NODE_68273_length_232_cov_2.269036_g60332_i0forward_frame_1 - 0.034 14.1 0.0 0.039 13.9 0.0 1.0 1 0 0 1 1 1 0 Nucleolar protein Swm2 TK PF00265.18 NODE_68269_length_232_cov_2.324873_g60328_i0forward_frame_1 - 0.024 14.5 0.1 0.027 14.4 0.1 1.0 1 0 0 1 1 1 0 Thymidine kinase DUF5466 PF17554.2 NODE_68256_length_232_cov_2.609137_g60315_i0reverse_frame_1 - 0.06 13.6 0.4 0.19 11.9 0.2 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5466) FAD_binding_8 PF08022.12 NODE_68250_length_232_cov_2.751269_g60309_i0forward_frame_1 - 0.0016 18.5 0.0 0.0019 18.3 0.0 1.1 1 0 0 1 1 1 1 FAD-binding domain Pox_A51 PF04948.13 NODE_68248_length_232_cov_2.771574_g60307_i0reverse_frame_1 - 0.14 11.0 0.0 0.16 10.8 0.0 1.0 1 0 0 1 1 1 0 Poxvirus A51 protein Trehalose_PPase PF02358.16 NODE_68238_length_232_cov_3.416244_g60297_i0forward_frame_1 - 0.1 11.7 0.1 0.13 11.4 0.1 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks308.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks308.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks308.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks308.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5525 PF17663.1 NODE_68234_length_232_cov_3.680203_g60293_i0reverse_frame_1 - 0.028 12.5 1.3 0.029 12.5 1.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) zf_CCCH_5 PF18384.1 NODE_68227_length_232_cov_4.664975_g60286_i0forward_frame_1 - 0.46 10.6 3.5 2.6 8.2 0.2 2.2 2 0 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) Amastin PF07344.11 NODE_68226_length_232_cov_4.700508_g60285_i0forward_frame_1 - 0.022 14.6 0.4 0.028 14.3 0.4 1.2 1 0 0 1 1 1 0 Amastin surface glycoprotein LCE6A PF15858.5 NODE_68212_length_232_cov_39.573604_g60271_i0reverse_frame_1 - 0.13 13.1 2.4 0.13 13.0 1.8 1.3 1 1 0 1 1 1 0 Late cornified envelope protein 6A family DUF5477 PF17571.2 NODE_68208_length_232_cov_47.370558_g60267_i0reverse_frame_1 - 0.0093 16.1 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5477) DUF572 PF04502.13 NODE_68199_length_232_cov_56.730964_g60258_i0forward_frame_1 - 4.9e-07 29.7 0.5 5.4e-07 29.6 0.5 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF572) F-box-like PF12937.7 NODE_68196_length_232_cov_63.060914_g60255_i0forward_frame_1 - 0.97 9.4 4.6 0.78 9.7 3.5 1.4 1 1 0 1 1 1 0 F-box-like PsbH PF00737.20 NODE_68189_length_232_cov_73.654822_g60248_i0reverse_frame_1 - 0.35 10.6 0.8 0.96 9.2 0.0 1.9 1 1 1 2 2 2 0 Photosystem II 10 kDa phosphoprotein zf-RING-like PF08746.11 NODE_68182_length_232_cov_91.670051_g60241_i0forward_frame_1 - 0.071 13.4 0.7 0.12 12.7 0.2 1.6 2 0 0 2 2 2 0 RING-like domain Glyco_hydro_30 PF02055.16 NODE_68170_length_232_cov_146.994924_g60229_i0forward_frame_1 - 0.1 11.5 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 30 TIM-barrel domain ESM4 PF15952.5 NODE_68153_length_233_cov_0.979798_g60212_i0reverse_frame_1 - 0.25 11.8 4.4 0.26 11.7 4.4 1.0 1 0 0 1 1 1 0 Enhancer of split M4 family tRNA-synt_2b PF00587.25 NODE_68151_length_233_cov_1.010101_g60210_i0forward_frame_1 - 0.00014 21.9 0.0 0.00016 21.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) MDMPI_C PF07398.11 NODE_68148_length_233_cov_1.070707_g60207_i0forward_frame_1 - 0.33 11.9 6.1 1 10.3 6.1 1.7 1 1 0 1 1 1 0 MDMPI C-terminal domain He_PIG PF05345.12 NODE_68147_length_233_cov_1.090909_g60206_i0reverse_frame_1 - 0.001 19.2 0.2 0.0015 18.7 0.2 1.3 1 0 0 1 1 1 1 Putative Ig domain DUF3038 PF11237.8 NODE_68141_length_233_cov_1.171717_g60200_i0forward_frame_1 - 0.12 12.5 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) SH3_10 PF17902.1 NODE_68136_length_233_cov_1.207071_g60195_i0reverse_frame_1 - 0.017 15.2 0.3 0.057 13.5 0.1 1.8 2 0 0 2 2 2 0 SH3 domain DUF2188 PF09954.9 NODE_68125_length_233_cov_1.212121_g60184_i0reverse_frame_1 - 0.01 16.0 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2188) DUF4632 PF15451.6 NODE_68121_length_233_cov_1.227273_g60180_i0forward_frame_1 - 0.0066 16.5 2.4 0.0082 16.2 2.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4632) IQCJ-SCHIP1 PF15157.6 NODE_68120_length_233_cov_1.237374_g60179_i0reverse_frame_1 - 0.089 12.6 0.3 0.096 12.5 0.3 1.1 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif GFRP PF06399.13 NODE_68117_length_233_cov_1.262626_g60176_i0forward_frame_1 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) zf-C2HE PF16278.5 NODE_68113_length_233_cov_1.333333_g60172_i0reverse_frame_1 - 0.065 13.7 0.9 0.092 13.2 0.9 1.2 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger PRIMA1 PF16101.5 NODE_68106_length_233_cov_1.363636_g60165_i0reverse_frame_1 - 0.28 11.2 2.4 0.35 10.9 2.4 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 PDT PF00800.18 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.0076 16.1 0.6 0.0087 15.9 0.6 1.0 1 0 0 1 1 1 1 Prephenate dehydratase DUF1451 PF07295.11 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.018 15.1 6.2 0.019 15.0 6.2 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Phage_int_SAM_1 PF02899.17 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.045 14.0 0.8 0.1 12.9 0.4 1.7 1 1 1 2 2 2 0 Phage integrase, N-terminal SAM-like domain FAM184 PF15665.5 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.058 13.2 14.6 0.074 12.8 14.6 1.2 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Topoisom_I_N PF02919.15 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.28 10.7 8.7 0.29 10.6 8.7 1.0 1 0 0 1 1 1 0 Eukaryotic DNA topoisomerase I, DNA binding fragment PACT_coil_coil PF10495.9 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.59 10.7 5.4 1 10.0 5.4 1.4 1 1 0 1 1 1 0 Pericentrin-AKAP-450 domain of centrosomal targeting protein DUF4806 PF16064.5 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.59 10.5 7.5 0.43 10.9 4.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4806) YlqD PF11068.8 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.79 10.1 14.6 0.95 9.8 14.6 1.1 1 0 0 1 1 1 0 YlqD protein DUF2347 PF09804.9 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 1.1 8.8 4.9 1.1 8.7 4.9 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2347) Exonuc_VII_L PF02601.15 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 5 6.6 8.9 5.6 6.4 8.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit PHM7_cyt PF14703.6 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 6.2 7.0 10.1 7 6.8 3.1 2.1 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter TPR_2 PF07719.17 NODE_68088_length_233_cov_1.545455_g60147_i0forward_frame_1 - 3.2e-06 26.8 2.8 0.01 15.9 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_68088_length_233_cov_1.545455_g60147_i0forward_frame_1 - 0.00044 19.9 6.2 0.0066 16.2 0.1 2.5 3 0 0 3 3 3 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 NODE_68088_length_233_cov_1.545455_g60147_i0forward_frame_1 - 0.0081 15.6 0.3 0.017 14.5 0.0 1.6 2 0 0 2 2 2 1 SHNi-TPR TPR_11 PF13414.6 NODE_68088_length_233_cov_1.545455_g60147_i0forward_frame_1 - 0.042 13.5 0.0 0.042 13.5 0.0 2.3 2 1 1 3 3 3 0 TPR repeat ODV-E18 PF10717.9 NODE_68085_length_233_cov_1.570707_g60144_i0reverse_frame_1 - 2.3 8.2 6.1 0.16 11.9 1.6 1.4 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 DUF1127 PF06568.11 NODE_68082_length_233_cov_1.606061_g60141_i0reverse_frame_1 - 0.13 12.0 0.3 0.25 11.1 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1127) Plasmid_parti PF01672.16 NODE_68080_length_233_cov_1.611111_g60139_i0reverse_frame_1 - 0.0088 16.7 0.1 0.011 16.3 0.1 1.2 1 0 0 1 1 1 1 Putative plasmid partition protein Metallophos PF00149.28 NODE_68074_length_233_cov_1.641414_g60133_i0reverse_frame_1 - 0.053 14.0 0.1 0.056 13.9 0.1 1.0 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase TFIIE_beta PF02186.15 NODE_68073_length_233_cov_1.656566_g60132_i0reverse_frame_1 - 0.026 14.8 0.8 3.3 8.0 0.1 2.2 2 0 0 2 2 2 0 TFIIE beta subunit core domain DUF4052 PF13261.6 NODE_68073_length_233_cov_1.656566_g60132_i0forward_frame_1 - 0.052 13.4 1.0 0.057 13.2 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4052) BCL9 PF11502.8 NODE_68070_length_233_cov_1.676768_g60129_i0reverse_frame_1 - 0.21 11.4 0.3 0.32 10.8 0.3 1.2 1 0 0 1 1 1 0 B-cell lymphoma 9 protein Spc7 PF08317.11 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.014 14.3 4.3 0.014 14.3 4.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4446 PF14584.6 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.26 11.3 2.5 0.3 11.1 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) Sec20 PF03908.13 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.33 10.9 3.8 0.3 11.0 1.8 1.7 1 1 1 2 2 2 0 Sec20 DUF3450 PF11932.8 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.37 10.1 8.7 0.42 9.9 8.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TRAF_BIRC3_bd PF16673.5 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.53 10.1 5.1 1.3 8.9 1.1 2.1 1 1 1 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DHHC PF01529.20 NODE_68063_length_233_cov_1.762626_g60122_i0reverse_frame_1 - 0.00045 20.3 0.3 0.00047 20.3 0.3 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase CAML PF14963.6 NODE_68061_length_233_cov_1.772727_g60120_i0reverse_frame_1 - 0.29 11.2 2.8 0.34 11.0 2.8 1.1 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand ProQ PF04352.13 NODE_68048_length_233_cov_1.969697_g60107_i0reverse_frame_1 - 0.022 14.6 0.3 0.038 13.9 0.1 1.5 2 0 0 2 2 2 0 ProQ/FINO family Phage_cap_P2 PF05125.12 NODE_68047_length_233_cov_1.974747_g60106_i0reverse_frame_1 - 0.054 12.5 0.2 0.062 12.3 0.2 1.0 1 0 0 1 1 1 0 Phage major capsid protein, P2 family Metallophos PF00149.28 NODE_68032_length_233_cov_2.222222_g60091_i0forward_frame_1 - 0.0011 19.5 0.0 0.0012 19.4 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF3367 PF11847.8 NODE_68025_length_233_cov_2.338384_g60084_i0reverse_frame_1 - 0.11 10.4 0.0 0.12 10.2 0.0 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase RasGEF_N PF00618.20 NODE_68023_length_233_cov_2.383838_g60082_i0forward_frame_1 - 0.028 14.7 0.7 0.029 14.6 0.7 1.1 1 0 0 1 1 1 0 RasGEF N-terminal motif DUF999 PF06198.11 NODE_68018_length_233_cov_2.505051_g60077_i0reverse_frame_1 - 0.022 14.7 1.0 0.026 14.5 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF999) Terminase_GpA PF05876.12 NODE_68014_length_233_cov_2.565657_g60073_i0reverse_frame_1 - 0.11 11.0 1.1 0.12 10.9 1.1 1.0 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) DDT PF02791.17 NODE_68007_length_233_cov_2.621212_g60066_i0forward_frame_1 - 0.24 11.8 2.5 0.48 10.8 2.5 1.7 1 1 0 1 1 1 0 DDT domain CAMSAP_CC1 PF17095.5 NODE_68003_length_233_cov_2.707071_g60062_i0forward_frame_1 - 0.033 14.0 1.4 0.047 13.5 1.4 1.3 1 0 0 1 1 1 0 Spectrin-binding region of Ca2+-Calmodulin SPICE PF15678.5 NODE_68003_length_233_cov_2.707071_g60062_i0forward_frame_1 - 0.034 13.5 4.4 0.034 13.5 4.4 1.0 1 0 0 1 1 1 0 Centriole duplication and mitotic chromosome congression Chitin_synth_2 PF03142.15 NODE_68000_length_233_cov_2.828283_g60059_i0forward_frame_1 - 6.6e-05 21.7 0.1 7.7e-05 21.5 0.1 1.0 1 0 0 1 1 1 1 Chitin synthase Lamprin PF06403.11 NODE_67997_length_233_cov_3.055556_g60056_i0reverse_frame_1 - 0.00054 19.9 2.0 0.00054 19.9 2.0 2.0 1 1 1 2 2 2 1 Lamprin Phage_TAC_6 PF09550.10 NODE_67997_length_233_cov_3.055556_g60056_i0reverse_frame_1 - 2.9 8.4 4.4 9.3 6.8 0.5 2.6 2 1 1 3 3 3 0 Phage tail assembly chaperone protein, TAC Nepo_coat_C PF03688.14 NODE_67991_length_233_cov_4.272727_g60050_i0reverse_frame_1 - 0.071 13.0 0.0 0.099 12.5 0.0 1.2 1 1 0 1 1 1 0 Nepovirus coat protein, C-terminal domain TT_ORF1 PF02956.14 NODE_67989_length_233_cov_4.848485_g60048_i0reverse_frame_1 - 9.4 4.8 8.8 9.4 4.8 8.8 1.0 1 0 0 1 1 1 0 TT viral orf 1 FAM165 PF14981.6 NODE_67982_length_233_cov_25.257576_g60041_i0forward_frame_1 - 0.49 10.2 5.0 0.17 11.7 1.2 1.9 1 1 1 2 2 2 0 FAM165 family Glyco_hydro_97 PF10566.9 NODE_67977_length_233_cov_34.207071_g60036_i0reverse_frame_1 - 0.015 14.6 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 Glycoside hydrolase 97 Baculo_PEP_C PF04513.12 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.00053 20.0 0.1 0.00063 19.8 0.1 1.1 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus EzrA PF06160.12 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.00055 18.3 4.5 0.0012 17.1 4.4 1.5 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA YtxH PF12732.7 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.00065 20.2 2.2 0.00089 19.8 2.2 1.4 1 1 0 1 1 1 1 YtxH-like protein DUF1640 PF07798.11 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.0011 19.1 3.6 0.0012 18.9 3.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) Apolipoprotein PF01442.18 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.011 15.7 0.2 0.011 15.6 0.2 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF883 PF05957.13 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.017 15.7 0.2 0.02 15.5 0.2 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CCDC-167 PF15188.6 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.017 15.4 1.1 0.03 14.6 1.1 1.4 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF2461 PF09365.10 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.02 14.9 1.9 0.057 13.4 1.0 1.8 1 1 1 2 2 2 0 Conserved hypothetical protein (DUF2461) ATP12 PF07542.11 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.02 15.0 0.2 0.021 14.9 0.2 1.2 1 0 0 1 1 1 0 ATP12 chaperone protein FlaC_arch PF05377.11 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.15 12.5 6.7 0.4 11.1 1.8 2.4 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF1910 PF08928.10 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.56 10.2 5.7 0.97 9.5 5.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1910) Osmo_CC PF08946.10 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 3.5 7.9 9.1 2.3 8.5 0.4 2.3 1 1 1 2 2 2 0 Osmosensory transporter coiled coil TRP PF06011.12 NODE_67963_length_233_cov_53.106061_g60022_i0reverse_frame_1 - 8 5.1 11.6 8.9 4.9 11.6 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel CIA30 PF08547.12 NODE_67962_length_233_cov_56.040404_g60021_i0forward_frame_1 - 0.088 12.8 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) Melibiase PF02065.18 NODE_67956_length_233_cov_62.404040_g60015_i0forward_frame_1 - 0.09 11.7 0.3 0.091 11.7 0.3 1.0 1 0 0 1 1 1 0 Melibiase Ank_2 PF12796.7 NODE_67948_length_233_cov_70.166667_g60007_i0reverse_frame_1 - 0.1 13.2 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Phage_CI_repr PF07022.13 NODE_67948_length_233_cov_70.166667_g60007_i0forward_frame_1 - 0.17 12.0 0.2 0.23 11.5 0.2 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Yippee-Mis18 PF03226.14 NODE_67944_length_233_cov_78.934343_g60003_i0forward_frame_1 - 4.8e-06 26.7 0.4 6.1e-06 26.4 0.4 1.3 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DHHC PF01529.20 NODE_67941_length_233_cov_83.767677_g60000_i0forward_frame_1 - 0.018 15.2 0.0 0.018 15.2 0.0 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF5572 PF17733.1 NODE_67930_length_233_cov_158.626263_g59989_i0forward_frame_1 - 0.12 12.2 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5572) RNA_pol_Rpb1_R PF05001.13 NODE_67927_length_233_cov_199.767677_g59986_i0reverse_frame_1 - 0.77 10.2 5.2 0.49 10.8 0.7 2.6 3 0 0 3 3 3 0 RNA polymerase Rpb1 C-terminal repeat MORN PF02493.20 NODE_67926_length_233_cov_218.515152_g59985_i0forward_frame_1 - 5.3e-08 32.3 8.9 7.1e-07 28.8 1.1 2.3 2 0 0 2 2 2 2 MORN repeat CaATP_NAI PF12515.8 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_1 - 0.097 12.3 0.0 8.6 6.1 0.0 2.1 2 0 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain DUF3932 PF13068.6 NODE_67919_length_233_cov_2693.974747_g59978_i0forward_frame_1 - 0.072 13.4 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3932) Osw5 PF17062.5 NODE_67917_length_233_cov_4947.525253_g59976_i0forward_frame_1 - 1.3 9.2 17.2 2.3 8.4 17.2 1.4 1 1 0 1 1 1 0 Outer spore wall 5 Zeta_toxin PF06414.12 NODE_67914_length_233_cov_561730.893939_g59973_i0reverse_frame_1 - 0.032 13.5 0.1 0.034 13.4 0.1 1.0 1 0 0 1 1 1 0 Zeta toxin Cue1_U7BR PF18499.1 NODE_67912_length_234_cov_0.879397_g59971_i0reverse_frame_1 - 0.08 13.0 0.2 0.13 12.3 0.2 1.3 1 0 0 1 1 1 0 Ubc7p-binding region of Cue1 DUF4898 PF16239.5 NODE_67912_length_234_cov_0.879397_g59971_i0reverse_frame_1 - 0.089 12.8 1.0 0.18 11.7 0.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4898) Pox_polyA_pol_C PF12629.7 NODE_67901_length_234_cov_1.135678_g59960_i0forward_frame_1 - 0.0079 16.0 0.2 0.0099 15.7 0.2 1.1 1 0 0 1 1 1 1 Poxvirus poly(A) polymerase C-terminal domain AAA_lid_1 PF17857.1 NODE_67896_length_234_cov_1.175879_g59955_i0reverse_frame_1 - 0.053 13.7 0.2 0.059 13.6 0.2 1.1 1 0 0 1 1 1 0 AAA+ lid domain SOCS_box PF07525.16 NODE_67889_length_234_cov_1.206030_g59948_i0forward_frame_1 - 0.0014 19.0 1.7 0.002 18.4 1.7 1.6 1 1 0 1 1 1 1 SOCS box Pox_E10 PF04805.12 NODE_67882_length_234_cov_1.211055_g59941_i0forward_frame_1 - 2.9 7.8 6.6 4.5 7.2 6.6 1.4 1 0 0 1 1 1 0 E10-like protein conserved region PRIMA1 PF16101.5 NODE_67876_length_234_cov_1.271357_g59935_i0reverse_frame_1 - 1.3 9.1 7.6 1.6 8.7 7.6 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Thg1 PF04446.12 NODE_67870_length_234_cov_1.321608_g59929_i0forward_frame_1 - 0.051 13.6 0.1 0.065 13.3 0.1 1.1 1 0 0 1 1 1 0 tRNAHis guanylyltransferase DUF1936 PF09151.10 NODE_67865_length_234_cov_1.371859_g59924_i0reverse_frame_1 - 0.055 13.4 0.5 0.055 13.4 0.5 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) TMEM189_B_dmain PF10520.9 NODE_67859_length_234_cov_1.402010_g59918_i0forward_frame_1 - 0.1 12.7 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain Glyco_transf_6 PF03414.13 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_1 - 0.032 13.0 0.0 0.037 12.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 6 DUF4029 PF13221.6 NODE_67853_length_234_cov_1.437186_g59912_i0reverse_frame_1 - 0.049 14.3 0.4 0.065 13.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4029) DUF2250 PF10007.9 NODE_67848_length_234_cov_1.492462_g59907_i0reverse_frame_1 - 0.02 15.0 0.0 0.024 14.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Ku_C PF03730.14 NODE_67848_length_234_cov_1.492462_g59907_i0reverse_frame_1 - 0.056 14.2 0.2 0.061 14.0 0.2 1.1 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm tRNA-synt_1b PF00579.25 NODE_67846_length_234_cov_1.502513_g59905_i0forward_frame_1 - 8.6e-14 51.5 0.0 8.8e-14 51.5 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) FoP_duplication PF13865.6 NODE_67844_length_234_cov_1.527638_g59903_i0forward_frame_1 - 0.97 10.0 6.6 0.54 10.9 0.5 2.0 1 1 1 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 Glt_symporter PF03616.14 NODE_67833_length_234_cov_1.603015_g59892_i0reverse_frame_1 - 0.012 14.3 1.1 0.014 14.1 1.1 1.0 1 0 0 1 1 1 0 Sodium/glutamate symporter Glyco_hydro_3 PF00933.21 NODE_67828_length_234_cov_1.628141_g59887_i0reverse_frame_1 - 0.16 11.4 0.1 0.17 11.2 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 N terminal domain CheR PF01739.18 NODE_67828_length_234_cov_1.628141_g59887_i0forward_frame_1 - 5.7e-26 91.2 0.0 5.9e-26 91.2 0.0 1.0 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain DUF4454 PF14628.6 NODE_67824_length_234_cov_1.648241_g59883_i0reverse_frame_1 - 0.049 13.5 0.1 0.051 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4454) SelR PF01641.18 NODE_67816_length_234_cov_1.753769_g59875_i0reverse_frame_1 - 0.0079 16.3 0.8 0.38 10.8 0.1 2.1 1 1 1 2 2 2 2 SelR domain Yippee-Mis18 PF03226.14 NODE_67816_length_234_cov_1.753769_g59875_i0reverse_frame_1 - 0.041 14.1 4.2 1.4 9.2 0.8 2.1 1 1 1 2 2 2 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF3561 PF12084.8 NODE_67812_length_234_cov_1.798995_g59871_i0reverse_frame_1 - 0.032 14.2 4.1 0.037 14.0 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3561) DUF773 PF05600.12 NODE_67809_length_234_cov_1.829146_g59868_i0reverse_frame_1 - 0.019 13.7 0.2 0.022 13.5 0.2 1.1 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 Arm PF00514.23 NODE_67807_length_234_cov_1.834171_g59866_i0reverse_frame_1 - 0.13 12.3 1.2 0.25 11.5 0.2 2.0 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat O_Spanin_T7 PF17531.2 NODE_67793_length_234_cov_2.000000_g59852_i0reverse_frame_1 - 0.16 12.0 0.1 0.28 11.3 0.1 1.3 1 0 0 1 1 1 0 outer-membrane spanin sub-unit Phage_connector PF05352.12 NODE_67793_length_234_cov_2.000000_g59852_i0forward_frame_1 - 0.029 13.8 0.3 0.031 13.7 0.3 1.1 1 0 0 1 1 1 0 Phage Connector (GP10) Myb_DNA-binding PF00249.31 NODE_67792_length_234_cov_2.030151_g59851_i0reverse_frame_1 - 3.1e-19 68.9 6.6 5.2e-13 49.0 0.2 2.0 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_67792_length_234_cov_2.030151_g59851_i0reverse_frame_1 - 7.5e-17 61.3 3.8 2.1e-14 53.5 1.2 2.0 1 1 1 2 2 2 2 Myb-like DNA-binding domain TBPIP PF07106.13 NODE_67792_length_234_cov_2.030151_g59851_i0reverse_frame_1 - 0.16 11.9 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain Myb_DNA-bind_4 PF13837.6 NODE_67792_length_234_cov_2.030151_g59851_i0reverse_frame_1 - 0.19 12.1 2.8 0.84 10.1 0.8 2.3 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain Ion_trans PF00520.31 NODE_67791_length_234_cov_2.035176_g59850_i0forward_frame_1 - 2.7e-11 43.2 3.9 3e-11 43.0 3.9 1.0 1 0 0 1 1 1 1 Ion transport protein DUF5078 PF16877.5 NODE_67790_length_234_cov_2.045226_g59849_i0forward_frame_1 - 0.064 13.7 0.1 0.073 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5078) TFIIA_gamma_N PF02268.16 NODE_67785_length_234_cov_2.155779_g59844_i0reverse_frame_1 - 0.035 14.1 0.9 0.047 13.7 0.1 1.6 2 0 0 2 2 2 0 Transcription initiation factor IIA, gamma subunit, helical domain MerB PF03243.15 NODE_67782_length_234_cov_2.185930_g59841_i0reverse_frame_1 - 0.016 15.4 0.0 0.022 14.9 0.0 1.1 1 0 0 1 1 1 0 Alkylmercury lyase LRR_6 PF13516.6 NODE_67779_length_234_cov_2.231156_g59838_i0forward_frame_1 - 2.1e-05 24.2 1.1 0.0056 16.6 0.1 2.3 2 0 0 2 2 2 2 Leucine Rich repeat LRR_4 PF12799.7 NODE_67779_length_234_cov_2.231156_g59838_i0forward_frame_1 - 0.00038 20.8 1.1 0.00061 20.1 1.1 1.4 1 0 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_67779_length_234_cov_2.231156_g59838_i0forward_frame_1 - 0.0013 19.0 0.7 2.1 9.2 0.0 2.4 2 0 0 2 2 2 2 Leucine Rich Repeat LRR_8 PF13855.6 NODE_67779_length_234_cov_2.231156_g59838_i0forward_frame_1 - 0.019 14.7 1.6 0.11 12.3 1.6 2.0 1 1 0 1 1 1 0 Leucine rich repeat P4Ha_N PF08336.11 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.0011 19.0 2.5 0.0011 18.9 2.5 1.1 1 0 0 1 1 1 1 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region PKcGMP_CC PF16808.5 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.009 15.8 0.1 0.009 15.8 0.1 2.3 3 0 0 3 3 3 1 Coiled-coil N-terminus of cGMP-dependent protein kinase FAM76 PF16046.5 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.036 13.4 4.6 0.036 13.4 4.6 1.0 1 0 0 1 1 1 0 FAM76 protein DUF641 PF04859.12 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.052 13.9 3.4 0.068 13.5 3.4 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF16 PF01519.16 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.32 11.5 5.0 0.38 11.2 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF16 MmgE_PrpD PF03972.14 NODE_67768_length_234_cov_2.452261_g59827_i0reverse_frame_1 - 5.8e-20 71.3 0.1 6.2e-20 71.2 0.1 1.0 1 0 0 1 1 1 1 MmgE/PrpD family PsiB PF06290.11 NODE_67765_length_234_cov_2.482412_g59824_i0reverse_frame_1 - 0.13 11.7 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) DUF3452 PF11934.8 NODE_67758_length_234_cov_2.763819_g59817_i0reverse_frame_1 - 0.0024 17.4 1.8 0.0041 16.7 1.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3452) Patatin PF01734.22 NODE_67756_length_234_cov_2.849246_g59815_i0reverse_frame_1 - 0.0091 16.2 0.0 0.0097 16.1 0.0 1.0 1 0 0 1 1 1 1 Patatin-like phospholipase Usher PF00577.20 NODE_67755_length_234_cov_2.899497_g59814_i0reverse_frame_1 - 1.7e-25 89.9 0.5 1.9e-25 89.8 0.5 1.0 1 0 0 1 1 1 1 Outer membrane usher protein Kei1 PF08552.11 NODE_67755_length_234_cov_2.899497_g59814_i0forward_frame_1 - 0.077 12.9 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 Sugar_tr PF00083.24 NODE_67754_length_234_cov_2.909548_g59813_i0reverse_frame_1 - 6.2e-07 28.6 0.0 6.6e-07 28.5 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter SpoVIF PF14069.6 NODE_67754_length_234_cov_2.909548_g59813_i0reverse_frame_1 - 0.011 15.5 0.4 0.016 15.0 0.4 1.2 1 0 0 1 1 1 0 Stage VI sporulation protein F S_4TM PF18159.1 NODE_67754_length_234_cov_2.909548_g59813_i0reverse_frame_1 - 0.044 13.1 0.0 0.047 13.0 0.0 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF2873 PF11395.8 NODE_67753_length_234_cov_2.949749_g59812_i0reverse_frame_1 - 0.023 14.5 2.4 0.023 14.5 2.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) DUF3981 PF13139.6 NODE_67751_length_234_cov_2.984925_g59810_i0reverse_frame_1 - 0.026 14.9 1.9 0.027 14.8 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3981) Fe_dep_repr_C PF02742.15 NODE_67751_length_234_cov_2.984925_g59810_i0forward_frame_1 - 0.057 13.5 0.2 0.074 13.1 0.2 1.2 1 0 0 1 1 1 0 Iron dependent repressor, metal binding and dimerisation domain Pestivirus_E2 PF16329.5 NODE_67749_length_234_cov_3.185930_g59808_i0forward_frame_1 - 0.1 11.4 0.1 0.11 11.4 0.1 1.0 1 0 0 1 1 1 0 Pestivirus envelope glycoprotein E2 Fibrinogen_aC PF12160.8 NODE_67748_length_234_cov_3.231156_g59807_i0reverse_frame_1 - 0.058 13.2 0.1 0.084 12.7 0.1 1.2 1 0 0 1 1 1 0 Fibrinogen alpha C domain Viral_Beta_CD PF04530.12 NODE_67736_length_234_cov_5.085427_g59795_i0reverse_frame_1 - 0.061 13.6 0.9 0.07 13.4 0.9 1.1 1 0 0 1 1 1 0 Viral Beta C/D like family DUF2076 PF09849.9 NODE_67733_length_234_cov_8.814070_g59792_i0reverse_frame_1 - 0.0097 16.0 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) TolA_bind_tri PF16331.5 NODE_67728_length_234_cov_30.356784_g59787_i0forward_frame_1 - 0.0068 16.4 0.0 0.0079 16.2 0.0 1.1 1 0 0 1 1 1 1 TolA binding protein trimerisation Ins_P5_2-kin PF06090.12 NODE_67727_length_234_cov_30.432161_g59786_i0forward_frame_1 - 0.0022 17.5 0.1 0.0022 17.5 0.1 1.1 1 0 0 1 1 1 1 Inositol-pentakisphosphate 2-kinase Fun_ATP-synt_8 PF05933.13 NODE_67726_length_234_cov_34.366834_g59785_i0forward_frame_1 - 0.2 11.8 0.2 0.2 11.8 0.2 2.2 2 0 0 2 2 2 0 Fungal ATP synthase protein 8 (A6L) Coilin_N PF15862.5 NODE_67725_length_234_cov_35.391960_g59784_i0forward_frame_1 - 6.6 6.5 13.1 7.9 6.3 13.1 1.0 1 0 0 1 1 1 0 Coilin N-terminus PTCRA PF15028.6 NODE_67720_length_234_cov_40.698492_g59779_i0reverse_frame_1 - 0.13 12.0 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Pre-T-cell antigen receptor POTRA_2 PF08479.11 NODE_67720_length_234_cov_40.698492_g59779_i0forward_frame_1 - 0.0012 18.7 0.0 0.0013 18.5 0.0 1.3 1 1 0 1 1 1 1 POTRA domain, ShlB-type TMEM132D_C PF15706.5 NODE_67717_length_234_cov_44.819095_g59776_i0reverse_frame_1 - 1.5 8.6 4.8 2 8.3 4.8 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TipE PF16972.5 NODE_67717_length_234_cov_44.819095_g59776_i0reverse_frame_1 - 3.5 6.7 5.4 3.6 6.7 5.4 1.1 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE MORN PF02493.20 NODE_67717_length_234_cov_44.819095_g59776_i0forward_frame_1 - 0.009 15.9 0.1 0.009 15.9 0.1 2.3 2 0 0 2 2 2 1 MORN repeat ERK-JNK_inhib PF15002.6 NODE_67703_length_234_cov_53.989950_g59762_i0forward_frame_1 - 2.7 7.7 10.2 3.3 7.4 10.2 1.1 1 0 0 1 1 1 0 ERK and JNK pathways, inhibitor DUF5341 PF17276.2 NODE_67697_length_234_cov_60.804020_g59756_i0forward_frame_1 - 0.19 11.9 0.5 0.22 11.7 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5341) DUF3439 PF11921.8 NODE_67691_length_234_cov_69.145729_g59750_i0reverse_frame_1 - 0.0063 16.5 10.8 0.0076 16.2 10.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3439) SSP160 PF06933.11 NODE_67691_length_234_cov_69.145729_g59750_i0reverse_frame_1 - 0.064 11.5 8.9 0.068 11.4 8.9 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF802 PF05650.11 NODE_67688_length_234_cov_79.030151_g59747_i0reverse_frame_1 - 0.061 13.8 0.3 0.092 13.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF802) NDC10_II PF16787.5 NODE_67687_length_234_cov_80.185930_g59746_i0reverse_frame_1 - 0.023 13.8 0.4 0.026 13.6 0.4 1.0 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit, domain 2 DUF755 PF05501.11 NODE_67680_length_234_cov_118.457286_g59739_i0reverse_frame_1 - 0.0079 16.5 6.9 0.0087 16.3 6.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF755) Circo_capsid PF02443.15 NODE_67678_length_234_cov_124.477387_g59737_i0reverse_frame_1 - 0.65 9.5 6.2 0.66 9.5 6.2 1.0 1 0 0 1 1 1 0 Circovirus capsid protein Dishevelled PF02377.15 NODE_67678_length_234_cov_124.477387_g59737_i0reverse_frame_1 - 8.9 6.7 8.5 7 7.1 7.1 1.6 1 1 1 2 2 2 0 Dishevelled specific domain EBP PF05241.12 NODE_67663_length_234_cov_3413.236181_g59722_i0reverse_frame_1 - 0.44 10.0 4.8 0.66 9.4 4.8 1.2 1 0 0 1 1 1 0 Emopamil binding protein Curto_V3 PF07436.11 NODE_67658_length_235_cov_0.790000_g59717_i0forward_frame_3 - 0.0063 16.9 0.2 0.0083 16.5 0.2 1.1 1 0 0 1 1 1 1 Curtovirus V3 protein zf-H3C2 PF16721.5 NODE_67656_length_235_cov_0.800000_g59715_i0reverse_frame_3 - 0.12 12.7 1.3 0.21 12.0 0.2 1.8 1 1 1 2 2 2 0 Zinc-finger like, probable DNA-binding DUF1264 PF06884.11 NODE_67655_length_235_cov_0.820000_g59714_i0forward_frame_3 - 0.017 14.7 0.1 0.021 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1264) Macscav_rec PF03523.13 NODE_67653_length_235_cov_0.915000_g59712_i0forward_frame_3 - 0.014 15.3 0.1 0.027 14.4 0.1 1.5 1 0 0 1 1 1 0 Macrophage scavenger receptor Seipin PF06775.14 NODE_67652_length_235_cov_0.925000_g59711_i0forward_frame_2 - 0.059 13.5 0.8 0.082 13.0 0.5 1.4 1 1 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) PNKP-ligase_C PF16536.5 NODE_67651_length_235_cov_0.940000_g59710_i0forward_frame_3 - 0.0077 16.5 0.0 0.0093 16.2 0.0 1.1 1 0 0 1 1 1 1 PNKP adenylyltransferase domain, C-terminal region Cep57_CLD_2 PF14197.6 NODE_67645_length_235_cov_0.995000_g59704_i0forward_frame_3 - 0.023 14.8 0.2 0.03 14.4 0.2 1.1 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 RILP PF11461.8 NODE_67645_length_235_cov_0.995000_g59704_i0forward_frame_3 - 0.023 14.9 0.1 0.052 13.8 0.1 1.7 1 1 1 2 2 2 0 Rab interacting lysosomal protein MPS2 PF17060.5 NODE_67645_length_235_cov_0.995000_g59704_i0forward_frame_3 - 0.15 11.3 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 SAS-6_N PF16531.5 NODE_67644_length_235_cov_1.000000_g59703_i0reverse_frame_2 - 3.8e-09 37.0 0.4 4.2e-09 36.9 0.4 1.2 1 0 0 1 1 1 1 Centriolar protein SAS N-terminal Macoilin PF09726.9 NODE_67642_length_235_cov_1.000000_g59701_i0forward_frame_2 - 0.32 9.5 0.6 0.38 9.3 0.6 1.0 1 0 0 1 1 1 0 Macoilin family RINGv PF12906.7 NODE_67641_length_235_cov_1.015000_g59700_i0reverse_frame_3 - 0.0059 16.7 2.2 0.013 15.7 2.2 1.6 1 1 0 1 1 1 1 RING-variant domain Oleosin PF01277.17 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_2 - 0.074 12.8 0.1 0.12 12.1 0.0 1.3 1 1 0 1 1 1 0 Oleosin Alpha-2-MRAP_C PF06401.11 NODE_67636_length_235_cov_1.110000_g59695_i0forward_frame_2 - 0.0067 16.4 1.0 0.0072 16.3 1.0 1.0 1 0 0 1 1 1 1 Alpha-2-macroglobulin RAP, C-terminal domain DUF4085 PF13315.6 NODE_67634_length_235_cov_1.145000_g59693_i0forward_frame_3 - 0.011 15.3 0.3 0.012 15.2 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4085) Na_H_Exchanger PF00999.21 NODE_67633_length_235_cov_1.150000_g59692_i0forward_frame_3 - 2.5e-09 36.4 0.9 2.5e-09 36.4 0.9 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CxC2 PF18803.1 NODE_67632_length_235_cov_1.155000_g59691_i0reverse_frame_3 - 0.095 12.9 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases DUF4819 PF16090.5 NODE_67632_length_235_cov_1.155000_g59691_i0forward_frame_3 - 0.048 13.7 1.3 0.052 13.6 0.5 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4819) DUF818 PF05677.12 NODE_67630_length_235_cov_1.170000_g59689_i0forward_frame_3 - 0.097 11.6 0.2 0.095 11.6 0.2 1.0 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) MutS_I PF01624.20 NODE_67628_length_235_cov_1.175000_g59687_i0reverse_frame_3 - 0.057 13.7 0.1 0.07 13.4 0.1 1.2 1 0 0 1 1 1 0 MutS domain I PPR_3 PF13812.6 NODE_67626_length_235_cov_1.185000_g59685_i0forward_frame_2 - 0.093 12.8 0.0 0.4 10.8 0.0 1.8 1 1 0 1 1 1 0 Pentatricopeptide repeat domain CAF-1_p150 PF11600.8 NODE_67624_length_235_cov_1.195000_g59683_i0reverse_frame_2 - 6.4 6.5 35.7 6.7 6.4 35.7 1.0 1 0 0 1 1 1 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal Chordopox_RPO7 PF05864.12 NODE_67624_length_235_cov_1.195000_g59683_i0forward_frame_2 - 0.096 13.0 1.5 0.13 12.5 1.5 1.2 1 0 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Sugar_tr PF00083.24 NODE_67619_length_235_cov_1.200000_g59678_i0forward_frame_3 - 0.0042 16.0 0.2 0.0044 15.9 0.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks309.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks309.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks309.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks309.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PspB PF06667.12 ORF43474 - 0.11 12.6 1.6 1.6 8.8 0.5 2.8 2 0 0 2 2 2 0 Phage shock protein B SlyX PF04102.12 ORF43474 - 0.12 13.0 3.1 0.2 12.3 1.3 2.2 2 0 0 2 2 2 0 SlyX CCDC92 PF14916.6 ORF43474 - 0.98 9.2 5.7 0.55 10.0 0.3 3.1 3 0 0 3 3 3 0 Coiled-coil domain of unknown function DUF3437 PF11919.8 ORF35534 - 6.6e-07 29.2 0.0 1.9e-06 27.7 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF3437) ApoA-II PF04711.13 ORF35534 - 0.052 13.7 0.1 0.21 11.8 0.1 2.0 2 0 0 2 2 2 0 Apolipoprotein A-II (ApoA-II) zf-C2H2_11 PF16622.5 ORF35519 - 0.001 18.8 0.4 0.0023 17.7 0.4 1.5 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2 PF00096.26 ORF35519 - 0.0049 17.2 0.2 0.0049 17.2 0.2 1.9 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF35519 - 0.013 16.3 0.2 0.013 16.3 0.2 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger RDM PF11002.8 ORF35519 - 0.14 12.2 0.5 0.28 11.2 0.5 1.4 1 0 0 1 1 1 0 RFPL defining motif (RDM) Abhydrolase_1 PF00561.20 ORF34768 - 2.1e-16 60.4 0.2 2.5e-09 37.2 0.3 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF34768 - 2.5e-15 57.7 2.4 2.5e-15 57.7 1.0 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF34768 - 5.7e-12 45.4 0.0 2.1e-09 37.0 0.0 2.5 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF34768 - 0.0012 18.9 0.0 0.0026 17.9 0.0 1.5 1 0 0 1 1 1 1 TAP-like protein DLH PF01738.18 ORF34768 - 0.0038 16.8 0.0 0.083 12.4 0.0 2.3 2 0 0 2 2 2 1 Dienelactone hydrolase family Thioesterase PF00975.20 ORF34768 - 0.017 15.3 0.1 0.84 9.7 0.0 2.2 2 0 0 2 2 2 0 Thioesterase domain Sdh_cyt PF01127.22 ORF34768 - 0.031 14.3 0.1 0.13 12.3 0.1 2.0 1 1 1 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AXE1 PF05448.12 ORF34768 - 0.1 11.3 0.0 4.2 6.0 0.0 2.5 2 1 0 2 2 2 0 Acetyl xylan esterase (AXE1) Ion_trans PF00520.31 ORF34421 - 3.3e-10 39.6 12.0 1.7e-09 37.3 12.0 1.8 1 1 0 1 1 1 1 Ion transport protein Phage_holin_3_5 PF16085.5 ORF34421 - 0.023 14.8 0.2 0.072 13.2 0.2 1.8 1 0 0 1 1 1 0 Bacteriophage holin Hol, superfamily III DUF3626 PF12294.8 ORF33404 - 5.9e-24 84.6 0.1 3e-22 79.0 0.1 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF3626) EF-hand_7 PF13499.6 ORF33404 - 2e-05 24.9 0.2 5e-05 23.7 0.2 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF33404 - 5.4e-05 22.4 0.2 0.00012 21.4 0.2 1.6 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF33404 - 0.00018 21.3 0.1 0.00051 19.8 0.1 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF33404 - 0.01 15.3 0.1 0.021 14.3 0.1 1.5 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF33404 - 0.052 13.5 0.1 0.15 12.1 0.1 1.8 1 0 0 1 1 1 0 EF-hand domain UCH PF00443.29 ORF28239 - 3.4e-22 79.2 0.0 4.8e-22 78.7 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF28239 - 6.4e-07 29.3 0.0 1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Peptidase_S49 PF01343.18 ORF2302 - 1.3e-33 116.1 0.0 3.1e-33 114.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase family S49 Peptidase_S49_N PF08496.10 ORF2302 - 7.5e-20 71.6 0.0 1.1e-19 70.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal CLP_protease PF00574.23 ORF2302 - 8.4e-06 25.8 0.0 0.0013 18.7 0.0 2.2 1 1 1 2 2 2 2 Clp protease DUF4192 PF13830.6 ORF2302 - 0.0057 16.8 0.2 0.0088 16.1 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4192) SDH_sah PF01972.16 ORF2302 - 0.06 12.3 0.0 0.094 11.7 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF2302 - 0.12 12.6 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) TnsD PF15978.5 ORF2302 - 0.21 10.6 0.0 8.6 5.2 0.0 2.2 2 0 0 2 2 2 0 Tn7-like transposition protein D SAM_2 PF07647.17 ORF20923 - 0.00012 22.1 0.0 0.00022 21.3 0.0 1.4 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) PspB PF06667.12 ORF18554 - 0.11 12.6 1.6 1.6 8.8 0.5 2.8 2 0 0 2 2 2 0 Phage shock protein B SlyX PF04102.12 ORF18554 - 0.12 13.0 3.1 0.2 12.3 1.3 2.2 2 0 0 2 2 2 0 SlyX CCDC92 PF14916.6 ORF18554 - 0.98 9.2 5.7 0.55 10.0 0.3 3.1 3 0 0 3 3 3 0 Coiled-coil domain of unknown function Peptidase_S49 PF01343.18 ORF18465 - 1.3e-33 116.1 0.0 3.1e-33 114.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase family S49 Peptidase_S49_N PF08496.10 ORF18465 - 7.5e-20 71.6 0.0 1.1e-19 70.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal CLP_protease PF00574.23 ORF18465 - 8.4e-06 25.8 0.0 0.0013 18.7 0.0 2.2 1 1 1 2 2 2 2 Clp protease DUF4192 PF13830.6 ORF18465 - 0.0057 16.8 0.2 0.0088 16.1 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4192) SDH_sah PF01972.16 ORF18465 - 0.06 12.3 0.0 0.094 11.7 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF18465 - 0.12 12.6 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) TnsD PF15978.5 ORF18465 - 0.21 10.6 0.0 8.6 5.2 0.0 2.2 2 0 0 2 2 2 0 Tn7-like transposition protein D Ank_2 PF12796.7 ORF14312 - 8e-12 45.6 0.0 1.8e-11 44.4 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF14312 - 1.3e-10 41.5 0.0 2.9e-10 40.5 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF14312 - 5.5e-10 38.6 0.0 7e-05 22.9 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_1 PF00583.25 ORF14312 - 3.8e-08 33.6 0.0 1.8e-07 31.4 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Ank_5 PF13857.6 ORF14312 - 1e-06 28.9 0.0 6.8e-05 23.1 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_10 PF13673.7 ORF14312 - 6.8e-06 26.0 0.0 1.4e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ank PF00023.30 ORF14312 - 0.00094 19.5 0.0 0.014 15.8 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat FR47 PF08445.10 ORF14312 - 0.0012 18.7 0.0 0.56 10.2 0.0 3.2 3 0 0 3 3 3 1 FR47-like protein Acetyltransf_7 PF13508.7 ORF14312 - 0.0053 17.2 0.0 0.045 14.2 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF14312 - 0.01 16.0 0.0 0.027 14.6 0.0 1.8 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FtsA PF14450.6 ORF14231 - 1.8e-30 105.4 0.3 9.4e-25 87.0 0.0 2.1 2 0 0 2 2 2 2 Cell division protein FtsA SHS2_FTSA PF02491.20 ORF14231 - 2.4e-30 104.7 2.2 5e-30 103.7 2.2 1.6 1 0 0 1 1 1 1 SHS2 domain inserted in FTSA PilM_2 PF11104.8 ORF14231 - 3.3e-10 39.5 0.2 8.2e-07 28.4 0.0 2.6 2 1 0 2 2 2 2 Type IV pilus assembly protein PilM; MreB_Mbl PF06723.13 ORF14231 - 5.4e-10 38.6 0.3 5.4e-10 38.6 0.3 2.0 2 1 0 2 2 2 1 MreB/Mbl protein EutA PF06277.11 ORF14231 - 0.0011 17.9 0.4 0.0027 16.6 0.1 1.8 2 0 0 2 2 2 1 Ethanolamine utilisation protein EutA DDR PF08841.10 ORF14231 - 0.0015 17.6 1.2 0.0059 15.6 0.5 2.0 1 1 1 2 2 2 1 Diol dehydratase reactivase ATPase-like domain Actin PF00022.19 ORF14231 - 0.02 13.5 0.7 4.7 5.7 0.0 2.5 2 1 0 3 3 3 0 Actin StbA PF06406.11 ORF14231 - 0.074 12.3 0.1 1.4 8.0 0.0 2.3 2 0 0 2 2 2 0 StbA protein ANF_receptor PF01094.28 ORF14231 - 0.09 11.9 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region SrfB PF07520.11 ORF14231 - 0.15 9.9 0.1 0.88 7.4 0.1 1.8 2 0 0 2 2 2 0 Virulence factor SrfB Glyco_hydro_79n PF03662.14 ORF12396 - 7.8e-11 41.5 0.0 1e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 79, N-terminal domain Nrap_D5 PF17406.2 ORF11310 - 0.095 12.5 0.8 0.6 9.9 0.1 2.1 2 0 0 2 2 2 0 Nrap protein PAP/OAS1-like domain 5 Cgr1 PF03879.14 ORF11310 - 8.1 6.9 15.0 8.2 6.9 3.2 2.6 1 1 1 2 2 2 0 Cgr1 family WD40 PF00400.32 ORF103142 - 4.3e-09 36.9 0.3 0.066 14.1 0.0 5.9 5 2 0 5 5 5 3 WD domain, G-beta repeat PQQ_3 PF13570.6 ORF103142 - 0.0035 17.8 1.3 8.9 7.0 0.0 4.4 5 0 0 5 5 5 2 PQQ-like domain TANGO2 PF05742.12 ORF102998 - 5.7e-13 49.5 0.6 5.7e-13 49.5 0.6 1.9 2 1 0 2 2 2 1 Transport and Golgi organisation 2 Peptidase_S49 PF01343.18 ORF102460 - 1.3e-33 116.1 0.0 3.1e-33 114.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase family S49 Peptidase_S49_N PF08496.10 ORF102460 - 7.5e-20 71.6 0.0 1.1e-19 70.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal CLP_protease PF00574.23 ORF102460 - 8.4e-06 25.8 0.0 0.0013 18.7 0.0 2.2 1 1 1 2 2 2 2 Clp protease DUF4192 PF13830.6 ORF102460 - 0.0057 16.8 0.2 0.0088 16.1 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4192) SDH_sah PF01972.16 ORF102460 - 0.06 12.3 0.0 0.094 11.7 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF102460 - 0.12 12.6 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) TnsD PF15978.5 ORF102460 - 0.21 10.6 0.0 8.6 5.2 0.0 2.2 2 0 0 2 2 2 0 Tn7-like transposition protein D STT3 PF02516.14 ORF100897 - 0.0038 16.2 0.0 0.0048 15.9 0.0 1.1 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit Peptidase_S49 PF01343.18 ORF100209 - 1.3e-33 116.1 0.0 3.1e-33 114.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase family S49 Peptidase_S49_N PF08496.10 ORF100209 - 7.5e-20 71.6 0.0 1.1e-19 70.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal CLP_protease PF00574.23 ORF100209 - 8.4e-06 25.8 0.0 0.0013 18.7 0.0 2.2 1 1 1 2 2 2 2 Clp protease DUF4192 PF13830.6 ORF100209 - 0.0057 16.8 0.2 0.0088 16.1 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4192) SDH_sah PF01972.16 ORF100209 - 0.06 12.3 0.0 0.094 11.7 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF100209 - 0.12 12.6 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) TnsD PF15978.5 ORF100209 - 0.21 10.6 0.0 8.6 5.2 0.0 2.2 2 0 0 2 2 2 0 Tn7-like transposition protein D DUF2866 PF11065.8 NODE_14606_length_1164_cov_251.767050_g10999_i0reverse_frame_1 - 0.031 14.3 3.3 1.4 9.0 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2866) MGC-24 PF05283.11 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_3 - 0.048 14.1 13.3 0.084 13.3 13.3 1.3 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin FSA_C PF10479.9 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_3 - 0.055 11.6 10.5 0.075 11.2 10.5 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Mucin PF01456.17 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_3 - 0.18 11.8 37.1 0.33 10.9 37.1 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein AJAP1_PANP_C PF15298.6 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_3 - 1.5 9.0 18.0 2.5 8.3 18.0 1.3 1 0 0 1 1 1 0 AJAP1/PANP C-terminus Menin PF05053.13 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_2 - 1.2 7.4 4.0 1.6 7.0 4.0 1.1 1 0 0 1 1 1 0 Menin Secretin_N_2 PF07655.13 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_2 - 2.1 9.0 10.0 5 7.7 9.3 1.9 2 0 0 2 2 2 0 Secretin N-terminal domain Shisa PF13908.6 NODE_14532_length_1167_cov_88.395760_g10940_i0forward_frame_3 - 0.0011 19.3 0.1 0.003 17.8 0.1 1.8 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF3040 PF11239.8 NODE_14532_length_1167_cov_88.395760_g10940_i0forward_frame_3 - 0.64 10.3 9.8 1.4 9.2 9.8 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) AA_permease_2 PF13520.6 ORF99463 - 2.9e-44 151.6 42.0 3.6e-44 151.3 42.0 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF99463 - 3.1e-31 108.5 38.4 8.2e-31 107.1 38.5 1.6 1 1 0 1 1 1 1 Amino acid permease BPD_transp_2 PF02653.16 ORF97275 - 0.0013 18.0 4.8 0.0028 16.8 4.4 1.8 1 1 0 1 1 1 1 Branched-chain amino acid transport system / permease component Phage_holin_3_3 PF16083.5 ORF97275 - 0.0076 16.4 0.2 2.9 8.1 0.1 3.0 3 0 0 3 3 3 1 LydA holin phage, holin superfamily III DUF1430 PF07242.11 ORF97275 - 0.015 15.5 7.7 0.022 15.0 4.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1430) Peptidase_M50B PF13398.6 ORF97275 - 0.099 12.3 6.7 0.037 13.7 4.1 1.5 1 1 0 1 1 1 0 Peptidase M50B-like FUSC_2 PF13515.6 ORF97275 - 0.17 12.0 9.9 0.039 14.1 5.4 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein-like MFS_1 PF07690.16 ORF97275 - 0.22 10.4 8.9 0.17 10.7 3.7 2.3 2 1 0 2 2 2 0 Major Facilitator Superfamily DUF2085 PF09858.9 ORF97275 - 1.7 9.2 6.8 0.17 12.3 1.9 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2085) PRKCSH PF07915.13 ORF97094 - 2.5e-18 66.9 0.0 2.3e-10 41.4 0.0 2.4 2 0 0 2 2 2 2 Glucosidase II beta subunit-like protein PRKCSH_1 PF13015.6 ORF97094 - 9.4e-05 22.1 0.0 0.011 15.4 0.0 2.9 3 0 0 3 3 3 1 Glucosidase II beta subunit-like protein NYN PF01936.18 ORF77919 - 0.00024 21.6 0.0 0.00045 20.7 0.0 1.4 1 0 0 1 1 1 1 NYN domain PG_binding_2 PF08823.11 ORF77919 - 0.039 14.3 0.1 2.6 8.4 0.1 2.7 2 1 0 2 2 2 0 Putative peptidoglycan binding domain ABC1 PF03109.16 ORF76230 - 0.09 13.0 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 ABC1 family 4HBT PF03061.22 ORF73716 - 0.00047 20.4 0.4 0.76 10.2 0.2 2.6 2 0 0 2 2 2 2 Thioesterase superfamily IPU_b_solenoid PF18783.1 ORF73716 - 0.14 12.2 0.3 9.3 6.4 0.0 2.8 2 0 0 2 2 2 0 Isopullulanase beta-solenoid repeat Peptidase_C1 PF00112.23 ORF71605 - 3.1e-48 164.7 2.3 5.7e-48 163.9 2.3 1.4 1 1 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF71605 - 1.2e-07 32.1 0.5 2.3e-07 31.2 0.5 1.4 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF71605 - 0.073 11.8 0.2 6.9 5.3 0.0 2.1 2 0 0 2 2 2 0 Peptidase C1-like family AAA PF00004.29 ORF58948 - 1.2e-41 142.2 0.0 2e-41 141.5 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 ORF58948 - 6.9e-10 38.7 0.1 1.6e-09 37.6 0.1 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 ORF58948 - 9.9e-10 38.1 0.2 1.9e-09 37.1 0.2 1.5 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF58948 - 2.7e-06 27.9 0.0 0.001 19.5 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 ORF58948 - 3.7e-06 27.2 0.0 2.4e-05 24.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 ORF58948 - 1.6e-05 24.9 0.1 9.1e-05 22.5 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Prot_ATP_OB_N PF17758.1 ORF58948 - 9.9e-05 21.9 0.2 0.00057 19.5 0.1 2.3 3 0 0 3 3 2 1 Proteasomal ATPase OB N-terminal domain RuvB_N PF05496.12 ORF58948 - 0.0002 21.2 0.0 0.00044 20.0 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF58948 - 0.00094 19.5 0.1 0.032 14.5 0.0 2.4 1 1 1 2 2 2 1 AAA domain DUF815 PF05673.13 ORF58948 - 0.0026 17.0 0.0 0.0044 16.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 ORF58948 - 0.0043 17.6 0.0 0.016 15.7 0.0 2.0 2 0 0 2 2 1 1 AAA domain RNA_helicase PF00910.22 ORF58948 - 0.0051 17.2 0.0 0.012 16.0 0.0 1.6 1 0 0 1 1 1 1 RNA helicase eIF-1a PF01176.19 ORF58948 - 0.0068 16.2 0.0 0.015 15.1 0.0 1.7 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 IstB_IS21 PF01695.17 ORF58948 - 0.0082 15.9 0.0 0.021 14.5 0.0 1.7 1 0 0 1 1 1 1 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF58948 - 0.017 14.5 0.0 0.034 13.5 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 ORF58948 - 0.022 14.8 0.0 0.051 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF58948 - 0.025 14.2 0.0 0.066 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF58948 - 0.029 14.1 0.1 0.071 12.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_3 PF07726.11 ORF58948 - 0.03 14.2 0.0 0.065 13.1 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 ORF58948 - 0.035 13.6 0.0 0.092 12.2 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_28 PF13521.6 ORF58948 - 0.039 14.2 0.0 0.077 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 ORF58948 - 0.041 13.1 0.0 0.076 12.2 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain TsaE PF02367.17 ORF58948 - 0.14 12.2 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 ORF58948 - 0.15 12.2 0.0 0.28 11.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF58948 - 0.15 11.9 0.1 1 9.3 0.0 2.2 1 1 0 2 2 2 0 NACHT domain AAA_30 PF13604.6 ORF58948 - 0.16 11.7 0.0 0.32 10.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 ORF58948 - 0.16 11.7 0.4 0.97 9.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain Glyco_transf_54 PF04666.13 ORF55840 - 1.6e-07 30.5 0.0 2.1e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region Rubredoxin PF00301.20 ORF46443 - 3.8e-21 74.8 2.5 6.5e-21 74.1 2.5 1.4 1 0 0 1 1 1 1 Rubredoxin Flavodoxin_1 PF00258.25 ORF46443 - 7.3e-13 48.9 0.0 1.1e-12 48.4 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin DnaT PF17948.1 ORF46443 - 0.037 13.7 0.1 0.082 12.6 0.1 1.6 1 0 0 1 1 1 0 DnaT DNA-binding domain HA PF03457.14 ORF43986 - 8.7e-12 45.2 6.1 0.0073 16.6 0.3 3.7 4 0 0 4 4 4 3 Helicase associated domain Herpes_UL33 PF03581.13 ORF43986 - 0.15 12.5 0.9 0.96 9.9 0.3 2.6 3 1 1 4 4 4 0 Herpesvirus UL33-like protein PMBR PF09373.10 ORF43986 - 0.15 12.2 0.0 0.96 9.7 0.0 2.2 2 0 0 2 2 2 0 Pseudomurein-binding repeat NYN PF01936.18 ORF38669 - 3e-11 44.0 0.1 7.5e-11 42.7 0.1 1.7 1 1 0 1 1 1 1 NYN domain Syntaxin-6_N PF09177.11 ORF33953 - 0.0082 16.7 3.2 0.0082 16.7 3.2 3.2 2 1 1 3 3 3 1 Syntaxin 6, N-terminal DUF2744 PF10910.8 ORF33953 - 0.0082 16.1 0.1 0.027 14.5 0.1 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF2744) Lectin_N PF03954.14 ORF33953 - 2.7 7.7 9.1 0.9 9.3 4.8 2.3 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain BST2 PF16716.5 ORF33953 - 4.2 8.0 17.8 2.3 8.9 10.1 2.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF4337 PF14235.6 ORF33953 - 8.3 6.5 19.1 0.71 10.0 10.5 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4337) IFT81_CH PF18383.1 ORF28572 - 8.8e-28 97.0 0.0 8.8e-28 97.0 0.0 2.6 2 1 2 4 4 4 1 Intraflagellar transport 81 calponin homology domain Tricorn_C1 PF14684.6 ORF28572 - 0.087 12.9 0.4 0.41 10.8 0.0 2.3 3 0 0 3 3 3 0 Tricorn protease C1 domain LPP PF04728.13 ORF28572 - 0.16 12.4 6.3 0.99 9.8 1.5 3.3 2 0 0 2 2 2 0 Lipoprotein leucine-zipper HALZ PF02183.18 ORF28572 - 0.63 10.3 7.6 11 6.3 1.4 3.2 2 1 1 3 3 3 0 Homeobox associated leucine zipper TSC22 PF01166.18 ORF28572 - 1.3 9.4 7.7 39 4.7 3.9 3.4 2 1 1 3 3 3 0 TSC-22/dip/bun family DUF1664 PF07889.12 ORF28572 - 1.9 8.5 17.6 3 7.9 3.7 3.7 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) SSP160 PF06933.11 ORF20707 - 3 5.9 16.8 4.3 5.4 16.8 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Peptidase_C1 PF00112.23 ORF18164 - 5e-49 167.3 2.0 9e-49 166.5 2.0 1.4 1 1 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF18164 - 1.1e-07 32.1 0.5 2.3e-07 31.2 0.5 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF18164 - 0.066 12.0 0.3 6.9 5.3 0.0 2.1 2 0 0 2 2 2 0 Peptidase C1-like family MTS PF05175.14 ORF16927 - 7.2e-60 201.4 0.0 1.2e-58 197.5 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 ORF16927 - 2.8e-10 40.2 0.0 1.3e-09 38.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF16927 - 4.3e-10 40.2 0.0 1.2e-09 38.7 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF16927 - 1.3e-08 35.5 0.0 8.8e-08 32.8 0.0 2.4 3 0 0 3 3 3 1 Methyltransferase domain PrmA PF06325.13 ORF16927 - 1.2e-05 24.8 0.0 4.6e-05 23.0 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.6 ORF16927 - 0.00011 22.1 0.0 0.00019 21.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 ORF16927 - 0.00034 20.3 0.0 0.00066 19.4 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 ORF16927 - 0.00037 21.1 0.0 0.00094 19.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 ORF16927 - 0.00083 19.1 0.1 0.0045 16.7 0.0 2.0 2 0 0 2 2 2 1 Lysine methyltransferase Methyltransf_18 PF12847.7 ORF16927 - 0.0016 18.4 0.0 0.0034 17.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_10 PF05971.12 ORF16927 - 0.003 17.0 0.0 0.0051 16.2 0.0 1.3 1 0 0 1 1 1 1 RNA methyltransferase ShK PF01549.24 ORF12200 - 8.4e-07 29.4 21.0 0.00049 20.6 2.3 3.5 3 0 0 3 3 3 2 ShK domain-like DUF4741 PF15897.5 ORF12200 - 0.0046 16.8 0.1 0.01 15.7 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4741) GlnD_UR_UTase PF08335.11 ORF12200 - 0.1 12.7 1.7 0.44 10.6 0.8 2.1 1 1 1 2 2 2 0 GlnD PII-uridylyltransferase Peptidase_C1 PF00112.23 ORF112382 - 5e-49 167.3 2.0 9e-49 166.5 2.0 1.4 1 1 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF112382 - 1.1e-07 32.1 0.5 2.3e-07 31.2 0.5 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF112382 - 0.066 12.0 0.3 6.9 5.3 0.0 2.1 2 0 0 2 2 2 0 Peptidase C1-like family DUF4064 PF13273.6 ORF100534 - 0.055 13.7 1.8 0.26 11.6 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) ATP-synt_S1 PF05827.12 ORF100534 - 0.16 11.8 0.7 0.33 10.8 0.7 1.5 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) BPD_transp_2 PF02653.16 NODE_14740_length_1159_cov_3.156584_g11105_i0reverse_frame_1 - 0.0033 16.6 8.8 0.004 16.3 8.8 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Thiolase_N PF00108.23 ORF95805 - 5e-87 291.5 1.2 6.7e-87 291.1 1.2 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF95805 - 2.7e-49 165.9 0.3 2.7e-49 165.9 0.3 1.7 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF95805 - 5e-06 26.3 0.8 5e-06 26.3 0.8 1.7 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 ORF95805 - 0.00022 21.0 0.5 0.057 13.3 0.1 2.5 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GrpE PF01025.19 ORF93665 - 3.9e-38 130.7 16.4 4.6e-37 127.2 15.8 2.5 1 1 0 1 1 1 1 GrpE CCDC-167 PF15188.6 ORF93665 - 0.044 14.1 5.8 0.15 12.4 5.8 1.9 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 YscO PF07321.12 ORF93665 - 0.087 12.8 9.7 0.032 14.2 5.9 2.2 2 0 0 2 2 2 0 Type III secretion protein YscO FAM76 PF16046.5 ORF93665 - 0.26 10.6 21.5 0.5 9.7 21.5 1.4 1 0 0 1 1 1 0 FAM76 protein FRB_dom PF08771.11 ORF93665 - 0.37 11.2 8.4 2.9 8.4 4.8 3.0 2 1 1 3 3 3 0 FKBP12-rapamycin binding domain DUF4407 PF14362.6 ORF93665 - 3.8 6.8 7.0 6.5 6.0 7.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ARL2_Bind_BART PF11527.8 ORF87695 - 1.8e-30 105.4 0.9 1.8e-30 105.4 0.9 2.4 2 1 0 2 2 2 1 The ARF-like 2 binding protein BART DUF3552 PF12072.8 ORF87695 - 0.0021 17.5 21.4 0.052 13.0 2.4 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF3552) DUF3435 PF11917.8 ORF87695 - 5.9 5.7 17.1 7.2 5.4 0.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3435) GSP_synth PF03738.14 ORF85867 - 1.3e-149 498.5 0.0 1.4e-149 498.4 0.0 1.0 1 0 0 1 1 1 1 Glutathionylspermidine synthase preATP-grasp Semialdhyde_dhC PF02774.18 ORF80973 - 6.9e-61 205.5 0.0 8.7e-61 205.2 0.0 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 ORF80973 - 5.1e-24 85.0 0.0 9.1e-24 84.2 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Pkinase PF00069.25 ORF72152 - 5.8e-39 134.0 0.0 8e-39 133.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF72152 - 1.5e-24 86.7 0.0 2.2e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF72152 - 1.5e-06 27.3 0.0 2.3e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF72152 - 0.00054 19.4 0.0 0.00079 18.8 0.0 1.3 1 0 0 1 1 1 1 Kinase-like PPR_2 PF13041.6 ORF66244 - 7.3e-27 93.3 0.0 6.9e-09 35.8 0.0 6.0 3 2 3 6 6 6 5 PPR repeat family PPR_3 PF13812.6 ORF66244 - 1.3e-18 66.8 0.0 8.2e-10 38.6 0.0 4.1 4 0 0 4 4 4 3 Pentatricopeptide repeat domain PPR PF01535.20 ORF66244 - 2e-17 62.1 0.2 0.0013 18.9 0.0 6.6 7 0 0 7 7 7 3 PPR repeat PPR_long PF17177.4 ORF66244 - 5.4e-15 55.3 0.3 1.4e-09 37.7 0.1 2.4 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF66244 - 2.2e-09 36.8 5.2 0.008 15.9 0.0 5.2 5 1 0 5 5 5 3 PPR repeat WW PF00397.26 ORF66244 - 0.0065 16.5 0.1 0.013 15.5 0.1 1.5 1 0 0 1 1 1 1 WW domain T2SSF PF00482.23 ORF66244 - 0.063 13.2 2.6 1.9 8.5 0.0 3.1 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein F TetR_C_11 PF16859.5 ORF66244 - 3.5 8.0 17.0 0.12 12.7 0.9 3.8 3 1 0 4 4 4 0 Tetracyclin repressor-like, C-terminal domain TrwB_AAD_bind PF10412.9 ORF61290 - 0.13 11.2 0.1 0.21 10.5 0.1 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Inhibitor_I29 PF08246.12 ORF52772 - 0.057 13.9 0.4 0.23 11.9 0.0 2.2 2 1 0 2 2 2 0 Cathepsin propeptide inhibitor domain (I29) SMBP PF16785.5 ORF52772 - 0.19 11.9 1.3 0.36 11.1 1.3 1.4 1 0 0 1 1 1 0 Small metal-binding protein H-kinase_dim PF02895.14 ORF52772 - 0.23 11.9 3.0 0.51 10.8 3.0 1.6 1 0 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain TMF_TATA_bd PF12325.8 ORF52772 - 0.37 11.0 12.0 0.48 10.7 7.2 2.6 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding Plk4_PB2 PF18409.1 ORF52772 - 0.55 10.9 8.0 0.37 11.5 3.7 2.4 1 1 1 2 2 2 0 Polo-like Kinase 4 Polo Box 2 YabA PF06156.13 ORF52772 - 0.56 10.9 12.0 0.17 12.5 7.8 2.3 2 1 0 2 2 2 0 Initiation control protein YabA YchF-GTPase_C PF06071.13 ORF50054 - 1.6e-40 137.1 0.2 1.6e-40 137.1 0.2 2.2 2 1 0 2 2 2 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 ORF50054 - 7.1e-23 80.9 0.0 1.9e-22 79.5 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF50054 - 6.6e-06 25.7 0.0 1.4e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF50054 - 1.7e-05 25.0 0.7 0.13 12.3 0.0 3.3 1 1 2 3 3 3 2 Dynamin family MeaB PF03308.16 ORF50054 - 4.4e-05 22.6 0.0 7.9e-05 21.8 0.0 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 ORF50054 - 0.013 16.0 0.2 0.049 14.2 0.0 2.0 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 ORF50054 - 0.059 13.9 0.0 0.3 11.6 0.0 2.1 1 1 0 1 1 1 0 ABC transporter RsgA_GTPase PF03193.16 ORF50054 - 0.098 12.6 0.1 0.32 10.9 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase Arginase PF00491.21 ORF34133 - 3.6e-13 49.7 0.0 5.4e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 Arginase family H_PPase PF03030.16 ORF2976 - 1.7e-28 99.7 2.1 2.1e-28 99.4 2.1 1.1 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase Sm_multidrug_ex PF06695.11 ORF2976 - 0.051 14.2 0.0 1.6 9.4 0.0 2.9 3 0 0 3 3 3 0 Putative small multi-drug export protein FAM176 PF14851.6 ORF2976 - 0.13 11.9 0.0 0.27 10.9 0.0 1.5 1 0 0 1 1 1 0 FAM176 family Sec62 PF03839.16 ORF2976 - 0.14 11.7 0.2 0.26 10.8 0.2 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 DUF4200 PF13863.6 ORF2831 - 0.022 15.1 24.4 0.022 15.1 24.4 4.2 2 2 0 3 3 3 0 Domain of unknown function (DUF4200) LCIB_C_CA PF18599.1 ORF2831 - 1.9 7.7 11.6 0.47 9.7 7.3 2.1 1 1 1 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases NPV_P10 PF05531.12 ORF2831 - 8.1 7.0 14.5 3.5 8.1 0.4 3.8 2 1 1 4 4 4 0 Nucleopolyhedrovirus P10 protein DASH_Dam1 PF08653.10 ORF2831 - 8.3 6.3 11.1 7.4 6.5 0.6 4.6 3 2 1 4 4 4 0 DASH complex subunit Dam1 Gln-synt_C PF00120.24 ORF27627 - 2.6e-16 59.6 0.0 2.5e-10 39.9 0.0 2.0 2 0 0 2 2 2 2 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 ORF27627 - 5.3e-09 35.7 0.0 1e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Fe-ADH PF00465.19 ORF25221 - 1.4e-92 310.3 0.1 1.8e-92 310.0 0.1 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 ORF25221 - 1.6e-10 41.1 0.2 3.2e-06 27.0 0.0 2.3 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 ORF25221 - 0.0084 15.3 0.1 0.42 9.7 0.0 2.6 2 0 0 2 2 2 1 3-dehydroquinate synthase PCI PF01399.27 ORF15346 - 7.5e-13 48.9 0.0 1.7e-12 47.8 0.0 1.6 1 0 0 1 1 1 1 PCI domain Usher PF00577.20 ORF12838 - 4.6e-85 286.5 10.0 5.3e-85 286.3 10.0 1.0 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF12838 - 1.8e-18 66.1 0.1 9.9e-18 63.7 0.0 2.2 2 0 0 2 2 2 1 PapC C-terminal domain YchF-GTPase_C PF06071.13 ORF112238 - 1.6e-40 137.1 0.2 1.6e-40 137.1 0.2 2.2 2 1 0 2 2 2 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 ORF112238 - 7.1e-23 80.9 0.0 1.9e-22 79.5 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF112238 - 6.6e-06 25.7 0.0 1.4e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF112238 - 1.7e-05 25.0 0.7 0.13 12.3 0.0 3.3 1 1 2 3 3 3 2 Dynamin family MeaB PF03308.16 ORF112238 - 4.4e-05 22.6 0.0 7.9e-05 21.8 0.0 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 ORF112238 - 0.013 16.0 0.2 0.049 14.2 0.0 2.0 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 ORF112238 - 0.059 13.9 0.0 0.3 11.6 0.0 2.1 1 1 0 1 1 1 0 ABC transporter RsgA_GTPase PF03193.16 ORF112238 - 0.098 12.6 0.1 0.32 10.9 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase PGK PF00162.19 ORF111079 - 1.8e-139 464.9 0.4 2.1e-139 464.7 0.4 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase EF-hand_7 PF13499.6 ORF104667 - 2.4e-10 40.7 0.0 4e-10 40.0 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF104667 - 3.9e-09 35.4 0.0 0.0015 17.9 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF104667 - 6.5e-07 28.8 0.0 0.04 13.9 0.0 3.1 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF104667 - 1e-05 25.3 0.3 0.00046 20.0 0.0 2.3 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF104667 - 2.9e-05 23.3 0.0 0.15 11.6 0.1 2.7 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF104667 - 0.0011 19.3 0.0 0.0021 18.4 0.0 1.3 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF104667 - 0.0031 17.7 0.6 0.0072 16.5 0.6 1.6 1 0 0 1 1 1 1 Dockerin type I domain EF-hand_11 PF08976.11 ORF104667 - 0.053 14.4 0.0 0.14 13.1 0.0 1.7 1 0 0 1 1 1 0 EF-hand domain EF-hand_4 PF12763.7 ORF104667 - 0.12 12.3 0.1 0.43 10.6 0.1 1.8 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand TPR_1 PF00515.28 ORF10455 - 4.9e-25 86.3 3.2 3.7e-07 29.7 0.0 5.6 5 1 0 5 5 5 5 Tetratricopeptide repeat TPR_11 PF13414.6 ORF10455 - 1e-23 82.7 2.5 3.7e-11 42.5 0.0 4.9 3 1 2 5 5 5 3 TPR repeat TPR_2 PF07719.17 ORF10455 - 3.5e-20 70.4 0.3 0.0015 18.5 0.0 5.4 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF10455 - 1.6e-18 66.9 0.1 4.5e-08 33.5 0.0 4.3 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_17 PF13431.6 ORF10455 - 3.7e-15 55.1 8.7 0.00026 21.1 0.3 5.9 6 0 0 6 6 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF10455 - 7.9e-15 53.8 4.8 0.002 18.2 0.1 5.3 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF10455 - 7.2e-12 45.4 0.2 0.00035 20.8 0.0 3.6 2 2 2 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF10455 - 9.7e-11 42.1 0.0 2.4e-05 24.9 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF10455 - 1.6e-08 34.6 0.9 5.6e-05 23.3 0.2 2.6 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 ORF10455 - 4.2e-07 29.5 0.0 0.6 10.3 0.0 4.7 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF10455 - 1.2e-06 28.8 0.0 0.0094 16.7 0.0 4.2 3 1 2 5 5 5 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF10455 - 2.6e-06 27.1 0.8 3.2 7.8 0.1 4.6 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF10455 - 7.7e-05 23.1 0.0 0.84 10.4 0.0 3.7 4 0 0 4 4 4 2 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF10455 - 0.00034 20.1 1.2 0.48 9.8 0.1 2.4 1 1 1 2 2 2 2 Coatomer epsilon subunit NARP1 PF12569.8 ORF10455 - 0.0012 17.8 0.1 0.0036 16.3 0.0 1.8 1 1 1 2 2 2 1 NMDA receptor-regulated protein 1 DUF3573 PF12097.8 ORF10455 - 0.0013 17.7 0.2 0.0025 16.7 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3573) SHNi-TPR PF10516.9 ORF10455 - 0.0054 16.1 0.2 0.021 14.3 0.0 2.1 2 0 0 2 2 2 1 SHNi-TPR TPR_9 PF13371.6 ORF10455 - 0.011 15.9 0.0 5.4 7.2 0.0 3.1 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF10455 - 0.053 13.9 0.0 2.6 8.4 0.0 3.3 2 1 2 4 4 4 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF10455 - 0.06 13.4 0.0 0.79 9.8 0.0 2.6 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat Choline_transpo PF04515.12 ORF103210 - 4.3e-59 200.3 14.6 4.3e-59 200.3 14.6 1.3 2 0 0 2 2 2 1 Plasma-membrane choline transporter Tubulin PF00091.25 ORF101886 - 6e-24 85.3 0.0 1e-23 84.6 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF101886 - 3.1e-13 50.0 0.0 3.2e-06 27.3 0.0 2.4 2 0 0 2 2 2 2 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF101886 - 0.013 15.2 0.1 0.33 10.6 0.0 2.3 2 0 0 2 2 2 0 Tubulin domain Tubulin_2 PF13809.6 ORF101886 - 0.092 11.9 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 Tubulin like Jnk-SapK_ap_N PF09744.9 NODE_14789_length_1157_cov_5.956328_g11149_i0reverse_frame_1 - 0.086 13.1 12.7 0.03 14.5 8.0 2.3 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 FSH1 PF03959.13 NODE_14769_length_1157_cov_630.921569_g11130_i0reverse_frame_1 - 0.0036 17.0 0.0 0.0055 16.4 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S9 PF00326.21 NODE_14769_length_1157_cov_630.921569_g11130_i0reverse_frame_1 - 0.012 15.1 0.0 0.021 14.3 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family Peripla_BP_4 PF13407.6 NODE_14740_length_1159_cov_3.156584_g11105_i0reverse_frame_2 - 2.1e-67 227.4 12.1 2.6e-67 227.1 12.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 NODE_14740_length_1159_cov_3.156584_g11105_i0reverse_frame_2 - 6.5e-18 65.1 0.9 8.5e-18 64.8 0.9 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 NODE_14740_length_1159_cov_3.156584_g11105_i0reverse_frame_2 - 2.2e-10 41.1 0.0 3.2e-06 27.6 0.0 2.2 1 1 1 2 2 2 2 Periplasmic binding protein-like domain YtfJ_HI0045 PF09695.10 NODE_14740_length_1159_cov_3.156584_g11105_i0reverse_frame_2 - 0.0015 18.2 0.4 0.034 13.8 0.1 2.4 2 0 0 2 2 2 1 Bacterial protein of unknown function (YtfJ_HI0045) Lant_dehydr_C PF14028.6 NODE_14740_length_1159_cov_3.156584_g11105_i0reverse_frame_2 - 0.088 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term Yip1 PF04893.17 ORF9704 - 3.1 7.5 11.9 0.4 10.4 6.0 2.3 2 1 1 3 3 3 0 Yip1 domain TrkH PF02386.16 ORF92491 - 7.8e-71 239.0 7.6 1e-70 238.7 7.6 1.1 1 0 0 1 1 1 1 Cation transport protein Peptidase_U4 PF03419.13 ORF92491 - 0.033 13.5 3.6 0.25 10.6 0.1 2.2 2 0 0 2 2 2 0 Sporulation factor SpoIIGA PIRT PF15099.6 ORF92491 - 0.44 10.1 1.9 1.2 8.8 1.9 1.6 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family AAA PF00004.29 ORF91887 - 5e-42 143.5 0.0 8.6e-42 142.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF91887 - 3.9e-11 42.8 0.0 2.5e-10 40.2 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_lid_3 PF17862.1 ORF91887 - 3.5e-06 26.7 0.0 1.1e-05 25.1 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF91887 - 2e-05 25.0 0.0 0.00073 20.0 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF91887 - 6.4e-05 22.7 0.0 0.00012 21.9 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF91887 - 0.00023 21.2 0.0 0.00075 19.5 0.0 1.9 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF91887 - 0.00031 20.8 0.0 0.0013 18.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF91887 - 0.00064 19.5 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF91887 - 0.001 18.7 0.3 0.12 12.0 0.1 2.3 1 1 0 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF91887 - 0.0012 19.0 0.0 0.0038 17.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF91887 - 0.0014 18.9 0.4 0.039 14.2 0.2 2.9 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF91887 - 0.0035 16.6 0.0 0.0057 15.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF91887 - 0.0051 17.0 0.0 0.0087 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF91887 - 0.007 16.7 0.0 0.021 15.2 0.0 2.0 2 0 0 2 2 1 1 RNA helicase AAA_18 PF13238.6 ORF91887 - 0.0075 16.8 0.0 0.016 15.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF91887 - 0.04 13.6 0.0 0.59 9.8 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF91887 - 0.052 12.9 0.1 0.1 12.0 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF91887 - 0.055 13.2 0.1 0.12 12.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain TIP49 PF06068.13 ORF91887 - 0.064 12.4 0.0 0.098 11.8 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain CPT PF07931.12 ORF91887 - 0.12 12.2 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF91887 - 0.14 11.6 0.1 0.23 10.9 0.1 1.5 1 1 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF91887 - 0.14 11.7 0.3 0.44 10.0 0.0 1.9 2 1 0 2 2 2 0 P-loop containing dynein motor region MIT PF04212.18 ORF91887 - 0.17 12.0 3.2 0.15 12.1 1.5 1.9 2 0 0 2 2 1 0 MIT (microtubule interacting and transport) domain GTP_EFTU PF00009.27 ORF90311 - 4.7e-17 62.2 0.0 7.1e-17 61.6 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF90311 - 7.8e-07 29.4 1.3 2.7e-06 27.7 0.3 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 ORF90311 - 0.00034 20.9 0.0 0.001 19.3 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain RsgA_GTPase PF03193.16 ORF90311 - 0.0038 17.1 0.3 0.014 15.3 0.2 1.9 1 1 1 2 2 2 1 RsgA GTPase PDT PF00800.18 ORF89912 - 3e-61 206.4 0.1 4.3e-61 205.9 0.1 1.2 1 0 0 1 1 1 1 Prephenate dehydratase CM_2 PF01817.21 ORF89912 - 7.8e-17 61.4 2.0 7.8e-17 61.4 2.0 1.8 2 0 0 2 2 2 1 Chorismate mutase type II WWE PF02825.20 ORF89912 - 0.11 13.1 0.0 0.25 12.0 0.0 1.6 1 0 0 1 1 1 0 WWE domain CLASP_N PF12348.8 ORF88070 - 0.046 13.3 0.5 0.079 12.5 0.5 1.3 1 0 0 1 1 1 0 CLASP N terminal MA3 PF02847.17 ORF88070 - 0.48 10.4 10.4 0.08 12.9 0.5 3.8 3 2 1 4 4 4 0 MA3 domain DUF4116 PF13475.6 ORF87945 - 8.6e-36 121.4 0.0 9.1e-17 60.5 0.0 3.5 2 1 1 4 4 4 3 Domain of unknown function (DUF4116) DUF4853 PF16145.5 ORF87945 - 0.056 13.6 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4853) Neur_chan_LBD PF02931.23 ORF79248 - 2e-11 43.8 0.0 3e-11 43.2 0.0 1.3 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel ligand binding domain EF-hand_6 PF13405.6 ORF79248 - 0.0025 17.6 0.1 0.0056 16.5 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain Neur_chan_memb PF02932.16 ORF79248 - 0.013 15.6 0.4 0.021 14.9 0.4 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region EF-hand_7 PF13499.6 ORF79248 - 0.015 15.7 0.0 0.028 14.9 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF79248 - 0.044 13.4 0.1 0.097 12.3 0.1 1.6 1 0 0 1 1 1 0 EF hand DUF4191 PF13829.6 ORF79248 - 0.11 11.9 0.4 15 4.9 0.4 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) DUF968 PF06147.11 ORF76202 - 0.012 15.9 0.0 0.021 15.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF968) Prok-RING_4 PF14447.6 ORF76202 - 1.4 8.9 9.1 0.7 9.8 0.1 3.0 3 1 0 3 3 3 0 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF76202 - 1.6 8.8 7.4 1.6 8.7 1.3 2.9 2 2 0 2 2 2 0 zinc-RING finger domain zf-C4_ClpX PF06689.13 ORF76202 - 5 7.1 8.6 53 3.8 3.6 3.3 2 1 0 2 2 2 0 ClpX C4-type zinc finger Radial_spoke PF04712.12 ORF72977 - 1.2e-78 265.3 1.3 3.1e-61 207.8 1.3 2.0 1 1 1 2 2 2 2 Radial spokehead-like protein Metallophos PF00149.28 ORF72459 - 3.5e-09 37.4 0.1 5.4e-09 36.9 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Glyco_transf_25 PF01755.17 ORF68510 - 1e-05 25.5 0.0 3.8e-05 23.6 0.0 2.0 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) Peptidase_S49_N PF08496.10 ORF68510 - 0.038 14.1 0.0 0.074 13.1 0.0 1.5 1 0 0 1 1 1 0 Peptidase family S49 N-terminal TagF_N PF09867.9 ORF68510 - 0.06 13.4 0.2 0.89 9.6 0.0 2.4 2 0 0 2 2 2 0 TagF N-terminal domain, Type VI secretion system-associated GAGA_bind PF06217.12 ORF61983 - 0.28 11.4 6.9 0.44 10.8 6.9 1.4 1 0 0 1 1 1 0 GAGA binding protein-like family Peptidase_C1 PF00112.23 ORF59976 - 3.4e-13 50.2 0.0 8.6e-13 48.9 0.0 1.7 1 1 0 1 1 1 1 Papain family cysteine protease DUF4175 PF13779.6 ORF59976 - 0.067 11.1 0.0 0.11 10.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) RPAP1_N PF08621.10 ORF5949 - 1.9 8.3 7.1 0.44 10.3 3.0 2.1 2 0 0 2 2 2 0 RPAP1-like, N-terminal Dynamin_M PF01031.20 ORF56412 - 6.8e-28 97.7 0.0 1.4e-27 96.6 0.0 1.5 2 0 0 2 2 2 1 Dynamin central region GED PF02212.18 ORF56412 - 1.5e-22 79.6 0.1 9.4e-22 77.0 0.0 2.1 2 0 0 2 2 2 1 Dynamin GTPase effector domain ApoO PF09769.9 ORF50852 - 0.042 13.8 1.0 0.042 13.8 1.0 2.1 2 0 0 2 2 2 0 Apolipoprotein O KLRAQ PF10205.9 ORF50852 - 2.4 8.4 16.4 1.5 9.1 5.0 3.4 2 1 0 3 3 3 0 Predicted coiled-coil domain-containing protein DUF4407 PF14362.6 ORF50852 - 9.8 5.4 19.7 4.2 6.6 17.0 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4407) GTP_EFTU PF00009.27 ORF48427 - 4.7e-17 62.2 0.0 7.1e-17 61.6 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF48427 - 7.8e-07 29.4 1.3 2.7e-06 27.7 0.3 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 ORF48427 - 0.00034 20.9 0.0 0.001 19.3 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain RsgA_GTPase PF03193.16 ORF48427 - 0.0038 17.1 0.3 0.014 15.3 0.2 1.9 1 1 1 2 2 2 1 RsgA GTPase MgrB PF13998.6 ORF47419 - 0.021 14.7 0.8 6.6 6.7 0.0 2.4 2 0 0 2 2 2 0 MgrB protein ox_reductase_C PF08635.10 ORF47419 - 0.064 12.9 0.1 11 5.6 0.0 2.3 2 0 0 2 2 2 0 Putative oxidoreductase C terminal domain RAP PF08373.10 ORF45095 - 5.8e-05 23.1 0.0 0.0001 22.3 0.0 1.4 1 0 0 1 1 1 1 RAP domain EF1G PF00647.19 ORF27895 - 8.4e-30 103.0 0.1 2.6e-29 101.4 0.1 1.9 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_N PF02798.20 ORF27895 - 9.4e-10 38.7 0.0 2.2e-09 37.6 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF27895 - 5.3e-08 33.2 0.0 1.5e-07 31.7 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF27895 - 1.7e-07 31.4 0.5 6.1e-07 29.6 0.0 2.2 2 1 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF27895 - 6.5e-06 26.3 1.0 2.2e-05 24.5 0.0 2.4 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF27895 - 2.8e-05 24.1 0.0 6.5e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF27895 - 0.0068 16.7 0.0 0.024 15.0 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF27895 - 0.0074 17.0 0.0 0.018 15.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain GST_C_6 PF17171.4 ORF27895 - 0.016 15.0 0.0 0.054 13.3 0.0 2.0 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Lactate_perm PF02652.14 ORF27895 - 0.13 11.0 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 L-lactate permease OAD_gamma PF04277.13 ORF27895 - 1.1 9.9 2.4 2.1 9.0 2.4 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain EF1G PF00647.19 ORF25497 - 1.6e-29 102.1 0.1 4.6e-29 100.6 0.1 1.8 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_N PF02798.20 ORF25497 - 9.6e-10 38.7 0.0 2.2e-09 37.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF25497 - 5.4e-08 33.1 0.0 1.5e-07 31.7 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF25497 - 1.7e-07 31.4 0.5 6.1e-07 29.6 0.0 2.2 2 1 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF25497 - 6.9e-06 26.2 1.0 2.2e-05 24.5 0.0 2.4 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF25497 - 2.9e-05 24.0 0.0 6.5e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF25497 - 0.0069 16.7 0.0 0.024 15.0 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF25497 - 0.0074 17.0 0.0 0.018 15.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain GST_C_6 PF17171.4 ORF25497 - 0.018 14.8 0.0 0.054 13.3 0.0 1.9 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Lactate_perm PF02652.14 ORF25497 - 0.13 11.0 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 L-lactate permease GluRS_N PF18466.1 ORF25497 - 0.13 12.7 0.0 2.6 8.5 0.0 2.8 2 0 0 2 2 2 0 Glutamate--tRNA ligase N-terminal domain OAD_gamma PF04277.13 ORF25497 - 1.1 9.9 2.4 2.1 9.0 2.4 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Nup35_RRM_2 PF14605.6 ORF25250 - 0.012 15.6 0.0 0.025 14.6 0.0 1.6 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_1 PF00076.22 ORF25250 - 0.014 15.2 0.0 0.11 12.4 0.0 2.3 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Metallophos PF00149.28 ORF21652 - 1.3e-08 35.5 1.2 2.2e-08 34.8 1.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF21652 - 0.0036 18.1 0.2 0.0094 16.8 0.2 1.7 1 0 0 1 1 1 1 Iron/zinc purple acid phosphatase-like protein C Mg_trans_NIPA PF05653.14 ORF17519 - 2.5e-18 66.2 3.8 3.1e-18 65.9 3.8 1.1 1 0 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 ORF17519 - 0.0039 17.4 1.2 0.0039 17.4 1.2 3.0 3 0 0 3 3 3 2 EamA-like transporter family GSP_synth PF03738.14 ORF14978 - 3.2e-162 540.0 0.2 3.6e-162 539.9 0.2 1.0 1 0 0 1 1 1 1 Glutathionylspermidine synthase preATP-grasp Abhydrolase_1 PF00561.20 ORF1211 - 1.1e-08 35.1 0.0 4.7e-08 33.0 0.0 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Aa_trans PF01490.18 ORF112374 - 8.5e-36 123.5 14.5 1.1e-35 123.2 14.5 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Sigma_reg_N PF13800.6 ORF112374 - 0.094 13.0 0.2 2 8.8 0.0 2.9 3 0 0 3 3 3 0 Sigma factor regulator N-terminal DUF3262 PF11660.8 ORF112374 - 2.4 8.6 8.1 2.1 8.8 0.1 3.6 3 1 0 3 3 3 0 Protein of unknown function (DUF3262) PCI PF01399.27 ORF109405 - 0.024 15.2 0.1 0.074 13.6 0.1 1.9 2 1 0 2 2 2 0 PCI domain Synaptobrevin PF00957.21 ORF105390 - 0.43 10.4 5.9 0.081 12.7 0.8 2.4 2 0 0 2 2 2 0 Synaptobrevin tRNA-synt_1g PF09334.11 ORF104737 - 6.3e-126 420.3 3.7 7.6e-126 420.0 3.7 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 ORF104737 - 1.2e-07 30.4 1.2 1.6e-05 23.4 0.0 2.7 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) DUF2797 PF10977.8 ORF104737 - 0.015 15.2 2.3 0.027 14.4 2.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) tRNA-synt_1e PF01406.19 ORF104737 - 0.038 13.3 0.1 0.059 12.7 0.1 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain C1_1 PF00130.22 ORF104737 - 4.6 7.2 8.0 4.5 7.2 0.5 2.6 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DZR PF12773.7 ORF104737 - 6.7 6.8 9.0 73 3.5 9.0 2.5 1 1 0 1 1 1 0 Double zinc ribbon Glyco_hydro_7 PF00840.20 ORF102284 - 1.2e-05 24.3 21.6 0.01 14.6 0.1 4.4 2 1 2 4 4 4 3 Glycosyl hydrolase family 7 Tmemb_18A PF09771.9 NODE_14815_length_1156_cov_21.386262_g11171_i0forward_frame_3 - 0.3 11.5 5.1 0.14 12.5 1.1 2.3 2 0 0 2 2 2 0 Transmembrane protein 188 DUF3192 PF11399.8 NODE_14789_length_1157_cov_5.956328_g11149_i0reverse_frame_2 - 0.1 12.6 0.3 0.28 11.2 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3192) HrpB7 PF09486.10 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 0.012 16.0 12.6 0.046 14.1 12.2 2.1 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) MAD PF05557.13 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 0.022 13.2 36.9 0.071 11.5 13.1 2.1 1 1 1 2 2 2 0 Mitotic checkpoint protein Spc7 PF08317.11 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 0.73 8.7 40.3 0.34 9.8 36.4 2.2 2 1 1 3 3 3 0 Spc7 kinetochore protein HMMR_N PF15905.5 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 0.75 9.2 43.5 0.015 14.8 35.7 2.0 3 0 0 3 3 3 0 Hyaluronan mediated motility receptor N-terminal Fib_alpha PF08702.10 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 1.5 9.0 30.2 0.99 9.6 19.7 3.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF3552 PF12072.8 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 2.5 7.4 36.7 0.84 9.0 7.5 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) NPV_P10 PF05531.12 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 2.8 8.5 21.3 4.3 7.9 1.4 3.0 3 0 0 3 3 2 0 Nucleopolyhedrovirus P10 protein ATG16 PF08614.11 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 3.3 7.9 33.0 1.1 9.4 16.3 2.7 2 1 1 3 3 2 0 Autophagy protein 16 (ATG16) ADIP PF11559.8 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 3.7 7.6 31.2 0.71 9.9 4.4 2.6 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding UPF0242 PF06785.11 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 4.5 7.3 40.3 0.055 13.6 29.0 2.5 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus TolA_bind_tri PF16331.5 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 4.5 7.4 21.6 3.8 7.7 1.6 3.0 1 1 1 2 2 2 0 TolA binding protein trimerisation CorA PF01544.18 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 6 6.1 10.6 12 5.1 10.6 1.6 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein USP8_interact PF08941.10 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 8.4 6.2 20.8 7.2 6.4 11.9 2.7 2 1 0 2 2 2 0 USP8 interacting DUF4407 PF14362.6 NODE_14778_length_1157_cov_229.901961_g11138_i0reverse_frame_3 - 9.5 5.5 24.1 16 4.7 21.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4407) YukC PF10140.9 NODE_14769_length_1157_cov_630.921569_g11130_i0reverse_frame_3 - 0.062 12.1 0.0 0.086 11.7 0.0 1.2 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC CRAL_TRIO PF00650.20 ORF99912 - 8.9e-24 84.0 0.0 1.2e-23 83.6 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF99912 - 3.3e-07 30.5 0.0 6.3e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF5523 PF17661.1 ORF99912 - 0.035 13.8 1.3 0.052 13.2 1.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5523) PGA2 PF07543.12 ORF99912 - 3.2 7.7 5.5 6.5 6.7 5.5 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 PapD_N PF00345.20 ORF9786 - 0.095 12.6 2.5 0.12 12.3 1.0 2.0 2 0 0 2 2 2 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain TraG_N PF07916.11 ORF9786 - 0.27 10.1 4.8 0.36 9.6 4.8 1.1 1 0 0 1 1 1 0 TraG-like protein, N-terminal region SET PF00856.28 ORF87004 - 0.00014 22.3 0.0 0.00061 20.2 0.0 2.1 2 1 0 2 2 2 1 SET domain Diacid_rec PF05651.13 ORF86249 - 3.6e-49 165.9 0.3 5.2e-49 165.4 0.3 1.2 1 0 0 1 1 1 1 Putative sugar diacid recognition HTH_30 PF13556.6 ORF86249 - 4e-23 81.0 3.1 3.7e-22 77.9 2.5 2.4 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain GGDEF_2 PF17853.1 ORF86249 - 1e-19 70.9 0.0 2.4e-19 69.7 0.0 1.7 1 0 0 1 1 1 1 GGDEF-like domain GAF_2 PF13185.6 ORF86249 - 0.047 14.0 0.0 0.12 12.6 0.0 1.7 1 0 0 1 1 1 0 GAF domain Ank_2 PF12796.7 ORF83976 - 2.3e-30 105.0 0.3 2.6e-11 43.9 0.1 3.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF83976 - 8.1e-23 80.5 0.8 5.6e-07 30.0 0.1 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF83976 - 5.7e-21 74.3 1.4 3.6e-06 27.1 0.1 4.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF83976 - 7.7e-19 65.8 0.7 0.033 14.7 0.0 5.5 5 0 0 5 5 5 5 Ankyrin repeat Ank PF00023.30 ORF83976 - 9.2e-18 63.8 3.2 0.0025 18.2 0.0 5.4 5 0 0 5 5 5 4 Ankyrin repeat DUF418 PF04235.12 ORF83708 - 3e-47 160.6 16.8 3e-47 160.6 16.8 2.5 2 1 1 3 3 3 1 Protein of unknown function (DUF418) Macoilin PF09726.9 ORF76232 - 6.7 5.1 15.9 8.4 4.8 15.9 1.2 1 0 0 1 1 1 0 Macoilin family DUF641 PF04859.12 ORF72570 - 6.2 7.2 17.2 0.12 12.7 3.9 2.8 3 0 0 3 3 3 0 Plant protein of unknown function (DUF641) Dynein_C PF18199.1 ORF72453 - 3.2e-79 266.4 0.5 4e-79 266.0 0.5 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF72453 - 1.9e-16 60.3 0.0 3.4e-16 59.5 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain HlyD_D23 PF16576.5 ORF67176 - 1.2e-15 57.4 2.6 1.2e-14 54.0 2.6 2.5 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 ORF67176 - 3.1e-12 46.1 0.1 6.5e-08 32.3 0.0 3.0 2 0 0 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 ORF67176 - 1.7e-11 44.8 4.0 9.5e-08 32.7 0.2 3.3 3 1 0 3 3 3 2 HlyD family secretion protein HlyD PF00529.20 ORF67176 - 3.9e-11 42.7 1.5 6.9e-11 41.9 1.5 1.6 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS PTS_EIIA_1 PF00358.20 ORF67176 - 0.09 12.5 0.1 19 5.0 0.0 2.4 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Sulfatase PF00884.23 ORF60529 - 2.8e-30 105.8 0.0 3.9e-30 105.3 0.0 1.1 1 0 0 1 1 1 1 Sulfatase DUF229 PF02995.17 ORF60529 - 6.7e-06 25.0 0.3 1e-05 24.4 0.0 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF229) DUF4976 PF16347.5 ORF60529 - 3.4e-05 24.0 0.0 0.022 15.0 0.1 2.4 2 1 0 2 2 2 2 Domain of unknown function (DUF4976) Phosphodiest PF01663.22 ORF60529 - 0.0047 16.6 0.0 0.0064 16.1 0.0 1.2 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase DAO PF01266.24 ORF47102 - 1e-19 71.4 0.1 1.7e-19 70.6 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer2_BFD PF04324.15 ORF47102 - 1.2e-10 41.5 2.5 4.2e-10 39.8 2.5 2.0 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain DAO_C PF16901.5 ORF47102 - 0.00024 20.9 0.0 0.00042 20.2 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase FAD_binding_2 PF00890.24 ORF47102 - 0.0006 19.0 0.1 0.00094 18.4 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain SO_alpha_A3 PF17806.1 ORF47102 - 0.057 13.8 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 Sarcosine oxidase A3 domain FAD_binding_3 PF01494.19 ORF47102 - 0.1 11.8 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain Ank_2 PF12796.7 ORF3693 - 1e-18 67.7 0.0 6.5e-06 26.7 0.0 3.6 3 1 0 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF3693 - 1.3e-12 47.5 1.0 0.1 13.1 0.0 5.8 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF3693 - 3.5e-12 46.3 3.4 0.0034 17.7 0.2 4.1 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF3693 - 4.1e-11 43.2 2.6 0.0011 19.4 0.1 5.5 3 2 4 7 7 7 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF3693 - 3e-10 39.4 0.4 0.072 13.7 0.0 5.9 6 0 0 6 6 6 3 Ankyrin repeat GTP_EFTU PF00009.27 ORF32534 - 1e-12 48.0 0.0 1.4e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF32534 - 1.1e-06 28.9 0.0 3.1e-06 27.5 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 ORF32534 - 0.00045 20.5 0.0 0.0012 19.1 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D4 PF14578.6 ORF32534 - 0.028 14.3 0.2 0.11 12.4 0.1 2.1 2 1 0 2 2 2 0 Elongation factor Tu domain 4 MitMem_reg PF13012.6 ORF28066 - 0.0047 17.3 4.8 0.0047 17.3 4.8 2.2 2 1 0 2 2 2 1 Maintenance of mitochondrial structure and function Vps53_N PF04100.12 ORF28066 - 0.07 12.1 15.6 0.0088 15.0 9.2 2.0 2 0 0 2 2 2 0 Vps53-like, N-terminal Vps23_core PF09454.10 ORF28066 - 0.11 12.4 1.0 0.5 10.3 1.0 2.2 1 0 0 1 1 1 0 Vps23 core domain Histone_HNS PF00816.21 ORF28066 - 0.11 13.3 0.6 0.11 13.3 0.6 3.2 2 1 0 2 2 2 0 H-NS histone family 4HB_MCP_1 PF12729.7 ORF28066 - 0.26 10.8 18.8 0.029 13.9 11.4 2.5 2 1 0 2 2 2 0 Four helix bundle sensory module for signal transduction LepB_GAP_C PF18227.1 ORF28066 - 0.56 10.8 4.2 2.5 8.7 0.0 3.3 3 0 0 3 3 3 0 LepB GAP domain C-terminal subdomain DUF1515 PF07439.11 ORF28066 - 0.63 10.1 8.7 1 9.4 1.2 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1515) DASH_Hsk3 PF08227.11 ORF28066 - 0.71 10.3 3.5 1.6 9.1 2.4 2.2 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like ArsR PF09824.9 ORF28066 - 1.3 8.6 9.8 0.27 10.8 2.3 2.9 3 0 0 3 3 3 0 ArsR transcriptional regulator XLF PF09302.11 ORF28066 - 4.2 7.5 16.6 4 7.6 11.8 3.0 1 1 1 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Phage_GPO PF05929.11 ORF28066 - 9 5.8 16.1 0.024 14.3 2.3 2.7 3 1 0 3 3 3 0 Phage capsid scaffolding protein (GPO) serine peptidase Attacin_C PF03769.15 ORF22530 - 0.0084 16.3 5.3 0.011 16.0 3.0 2.1 1 1 1 2 2 2 1 Attacin, C-terminal region TPR_15 PF13429.6 ORF1954 - 0.028 13.6 4.4 0.19 10.9 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF1954 - 0.064 14.1 0.5 0.064 14.1 0.5 3.6 2 1 2 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF1954 - 0.72 10.6 3.6 15 6.5 0.2 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat Aldo_ket_red PF00248.21 ORF17690 - 4.8e-68 229.5 0.0 5.8e-68 229.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family RSN1_7TM PF02714.15 ORF16874 - 1.9e-17 63.5 33.6 8.5e-11 41.7 10.7 2.2 1 1 1 2 2 2 2 Calcium-dependent channel, 7TM region, putative phosphate PHM7_cyt PF14703.6 ORF16874 - 0.033 14.4 1.3 0.033 14.4 1.3 1.8 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Vwaint PF14624.6 ORF1550 - 1.9e-26 92.0 0.0 3.1e-26 91.3 0.0 1.4 1 0 0 1 1 1 1 VWA / Hh protein intein-like VWA PF00092.28 ORF1550 - 0.013 15.8 0.0 0.031 14.5 0.0 1.6 2 0 0 2 2 2 0 von Willebrand factor type A domain Pkinase PF00069.25 ORF13562 - 4.5e-65 219.7 2.2 7.2e-65 219.0 2.2 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13562 - 7e-29 100.9 0.4 1.5e-28 99.8 0.4 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF13562 - 3.3e-16 57.5 5.6 3.3e-05 23.1 0.1 4.2 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF13562 - 1e-14 54.7 4.5 8e-10 39.0 0.1 3.2 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF13562 - 6.3e-10 38.2 8.9 0.0038 17.1 0.1 4.5 5 0 0 5 5 5 3 EF-hand domain Kinase-like PF14531.6 ORF13562 - 8.1e-10 38.5 0.1 3.3e-09 36.5 0.0 1.9 2 0 0 2 2 2 1 Kinase-like EF-hand_5 PF13202.6 ORF13562 - 3e-08 32.8 4.0 0.007 15.8 0.2 4.3 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF13562 - 8.6e-08 31.9 4.1 7.6e-05 22.5 0.0 3.4 3 1 1 4 4 4 2 EF-hand domain pair Pkinase_fungal PF17667.1 ORF13562 - 0.0012 17.7 0.8 0.0017 17.2 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF13562 - 0.0025 17.2 0.1 0.0049 16.2 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF13562 - 0.075 12.9 0.0 0.2 11.6 0.0 1.6 2 0 0 2 2 2 0 Phosphotransferase enzyme family HI0933_like PF03486.14 ORF11762 - 4.8e-148 493.2 0.0 5.4e-148 493.1 0.0 1.0 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox_3 PF13738.6 ORF11762 - 0.0005 19.4 0.0 0.0013 18.1 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF11762 - 0.0012 18.5 0.0 0.0038 16.8 0.0 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF11762 - 0.0019 17.3 0.1 0.064 12.3 0.0 2.7 3 0 0 3 3 3 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF11762 - 0.0048 16.2 0.0 0.031 13.5 0.0 2.0 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 ORF11762 - 0.0064 15.8 0.2 0.058 12.7 0.2 2.1 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase GIDA PF01134.22 ORF11762 - 0.1 11.7 0.1 0.32 10.0 0.0 1.8 2 0 0 2 2 2 0 Glucose inhibited division protein A SgrT PF15894.5 ORF11762 - 0.11 12.5 0.2 13 5.9 0.0 2.7 3 0 0 3 3 3 0 Inhibitor of glucose uptake transporter SgrT Ion_trans_2 PF07885.16 ORF112184 - 0.12 12.4 0.2 0.26 11.3 0.2 1.6 1 0 0 1 1 1 0 Ion channel DUF4419 PF14388.6 ORF112133 - 1e-83 281.2 0.0 1.3e-83 280.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) Aminotran_4 PF01063.19 ORF109533 - 3.2e-22 79.5 0.0 5.3e-22 78.8 0.0 1.2 1 0 0 1 1 1 1 Amino-transferase class IV zf-RING_UBOX PF13445.6 ORF109533 - 0.078 13.0 4.3 0.21 11.7 4.3 1.7 1 0 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF109533 - 0.11 12.3 4.1 0.3 11.0 4.1 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) GTP_EFTU PF00009.27 ORF109048 - 1e-12 48.0 0.0 1.4e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF109048 - 1.1e-06 28.9 0.0 3.1e-06 27.5 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 ORF109048 - 0.00045 20.5 0.0 0.0012 19.1 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D4 PF14578.6 ORF109048 - 0.028 14.3 0.2 0.11 12.4 0.1 2.1 2 1 0 2 2 2 0 Elongation factor Tu domain 4 LRR_6 PF13516.6 ORF103717 - 4.8e-09 35.6 7.4 0.0026 17.7 0.1 4.6 5 0 0 5 5 5 3 Leucine Rich repeat LRR_1 PF00560.33 ORF103717 - 0.0065 16.9 7.9 1.6 9.6 0.6 4.9 5 1 0 5 5 5 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF103717 - 0.13 12.7 6.0 0.27 11.7 0.3 3.2 2 1 2 4 4 4 0 Leucine Rich repeats (2 copies) He_PIG PF05345.12 ORF102427 - 0.00061 19.9 2.1 0.0024 18.0 1.5 2.3 2 0 0 2 2 2 1 Putative Ig domain fn3_3 PF14686.6 ORF102427 - 0.028 14.2 1.4 0.092 12.5 1.4 1.9 1 0 0 1 1 1 0 Polysaccharide lyase family 4, domain II Pkinase PF00069.25 ORF100422 - 2.3e-64 217.3 0.1 3.3e-64 216.8 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100422 - 1.6e-28 99.7 0.0 2.5e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF100422 - 0.039 13.3 0.0 0.073 12.4 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family MuF_C PF18819.1 ORF100422 - 0.46 10.5 3.2 0.36 10.8 1.0 2.0 2 0 0 2 2 2 0 Phage MuF-C-terminal domain Ank_2 PF12796.7 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 1.5e-70 233.8 24.3 1.9e-19 70.1 0.1 6.8 1 1 4 6 6 6 6 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 4.3e-69 226.1 19.4 4e-07 30.2 0.1 11.1 11 0 0 11 11 11 11 Ankyrin repeat Ank_5 PF13857.6 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 2.2e-52 174.4 20.7 7.6e-07 29.3 0.1 10.5 1 1 10 11 11 11 11 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 1e-47 159.9 13.4 5.9e-09 36.3 0.0 7.8 2 1 6 9 9 9 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 1.7e-47 153.9 2.2 0.0022 18.3 0.0 11.1 11 0 0 11 11 11 10 Ankyrin repeat FAD-SLDH PF12318.8 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 0.00083 19.5 3.7 2.6 8.1 0.2 3.7 1 1 3 4 4 4 2 Membrane bound FAD containing D-sorbitol dehydrogenase PK_C PF02887.16 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 0.0035 17.5 0.4 39 4.5 0.0 4.4 1 1 1 4 4 4 0 Pyruvate kinase, alpha/beta domain DUF4355 PF14265.6 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 0.013 15.7 2.2 17 5.7 0.0 4.0 4 0 0 4 4 4 0 Domain of unknown function (DUF4355) DUF5005 PF16396.5 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 0.062 12.0 0.5 6.2 5.4 0.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5005) Nterm_IS4 PF13006.7 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 0.18 12.1 8.2 39 4.5 0.0 5.5 4 2 3 7 7 7 0 Insertion element 4 transposase N-terminal Y1_Tnp PF01797.16 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 0.21 11.7 0.1 4.1 7.5 0.1 2.7 2 0 0 2 2 2 0 Transposase IS200 like ArsB PF02040.15 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_3 - 4.2 6.6 5.5 3.8 6.7 0.1 2.7 3 0 0 3 3 3 0 Arsenical pump membrane protein QslA_E PF18226.1 NODE_14883_length_1153_cov_55.780859_g11223_i0reverse_frame_2 - 0.078 12.9 1.0 14 5.6 0.1 2.8 2 1 0 2 2 2 0 LasR-specific antiactivator QslA chain E SsgA PF04686.12 NODE_14883_length_1153_cov_55.780859_g11223_i0forward_frame_3 - 0.00041 20.3 4.1 4.5 7.3 0.2 4.3 1 1 1 4 4 4 3 Streptomyces sporulation and cell division protein, SsgA RecA_dep_nuc PF16786.5 NODE_14883_length_1153_cov_55.780859_g11223_i0forward_frame_3 - 0.24 11.5 11.9 2.4 8.4 0.2 4.5 4 1 1 5 5 5 0 Recombination enhancement, RecA-dependent nuclease SUZ-C PF12901.7 NODE_14883_length_1153_cov_55.780859_g11223_i0forward_frame_2 - 0.067 13.2 8.4 3.6 7.7 0.1 3.7 3 0 0 3 3 3 0 SUZ-C motif EF-hand_1 PF00036.32 ORF9824 - 1.8e-12 45.9 0.1 4.5e-05 22.7 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF9824 - 4e-11 43.2 0.9 5.1e-05 23.6 0.0 2.9 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF9824 - 6.6e-11 41.2 0.0 0.00056 19.6 0.1 3.0 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF9824 - 4.4e-09 35.4 0.2 0.0016 17.8 0.0 2.9 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF9824 - 0.00012 21.8 0.2 0.067 13.1 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF9824 - 0.04 13.9 0.6 3.6 7.6 0.0 3.0 2 2 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF9824 - 0.059 13.2 0.0 5.9 6.8 0.0 2.6 2 0 0 2 2 2 0 EF hand BORA_N PF15280.6 ORF9824 - 0.22 11.1 0.9 0.5 10.0 0.0 1.8 2 0 0 2 2 2 0 Protein aurora borealis N-terminus DUF1664 PF07889.12 ORF93325 - 0.3 11.1 2.9 16 5.6 1.5 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Fez1 PF06818.15 ORF93325 - 0.3 11.5 6.7 1.2 9.5 6.6 2.0 1 1 0 1 1 1 0 Fez1 MbeD_MobD PF04899.12 ORF93325 - 0.37 10.9 5.0 4.7 7.4 0.4 2.6 2 0 0 2 2 2 0 MbeD/MobD like DUF745 PF05335.13 ORF93325 - 5.3 6.7 7.8 4.4 7.0 3.9 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF745) V-ATPase_C PF03223.15 ORF92593 - 3.9e-79 266.7 7.9 4.7e-79 266.5 7.9 1.0 1 0 0 1 1 1 1 V-ATPase subunit C Acetyltransf_11 PF13720.6 ORF92593 - 0.14 12.7 0.0 0.32 11.5 0.0 1.6 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Phg_2220_C PF09524.10 ORF92593 - 0.24 11.5 3.7 0.46 10.6 0.2 3.0 3 0 0 3 3 3 0 Conserved phage C-terminus (Phg_2220_C) Pkinase PF00069.25 ORF90473 - 1.6e-45 155.6 0.0 2.3e-45 155.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90473 - 2.1e-22 79.7 0.0 2.8e-22 79.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF90473 - 1.6e-08 34.2 0.0 2.3e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF90473 - 4.7e-06 26.1 0.1 1.2e-05 24.8 0.0 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF90473 - 0.00029 19.7 0.0 0.00067 18.5 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF90473 - 0.0027 17.7 0.0 0.0074 16.2 0.0 1.7 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF90473 - 0.027 13.4 0.0 0.04 12.8 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain DUF3237 PF11578.8 ORF90473 - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) Actin PF00022.19 ORF85546 - 4.6e-125 417.4 0.0 2.8e-124 414.8 0.0 1.8 1 1 0 1 1 1 1 Actin SH3_16 PF18348.1 ORF76418 - 0.0096 15.7 0.1 1.7 8.5 0.1 2.6 2 0 0 2 2 2 2 Bacterial dipeptidyl-peptidase Sh3 domain Spectrin PF00435.21 ORF76418 - 0.08 13.4 9.6 0.039 14.4 4.4 2.5 2 0 0 2 2 2 0 Spectrin repeat Mod_r PF07200.13 ORF76418 - 0.33 11.1 8.8 0.096 12.8 2.9 2.3 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein DUF1664 PF07889.12 ORF76418 - 4.7 7.3 5.5 7.3 6.6 0.8 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Chloroa_b-bind PF00504.21 ORF76389 - 1.4e-60 204.5 4.1 2.3e-32 112.7 0.1 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein SR-25 PF10500.9 ORF76389 - 0.41 10.2 3.7 0.61 9.7 3.7 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Ank_2 PF12796.7 ORF66959 - 4.2e-27 94.6 0.2 1.1e-08 35.5 0.0 3.2 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF66959 - 5.5e-21 74.7 0.4 1.2e-05 25.8 0.0 4.7 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF66959 - 5.5e-19 66.3 0.5 0.015 15.8 0.0 6.6 7 0 0 7 7 7 4 Ankyrin repeat Ank_5 PF13857.6 ORF66959 - 6.1e-16 58.3 0.4 0.00012 22.2 0.2 3.6 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF66959 - 3.4e-14 52.6 6.2 0.0024 18.3 0.1 5.7 5 1 1 6 6 6 4 Ankyrin repeat IgaA PF07095.11 ORF66959 - 0.0016 16.5 0.0 0.0021 16.1 0.0 1.1 1 0 0 1 1 1 1 Intracellular growth attenuator protein IgaA DDHD PF02862.17 ORF61692 - 2.4e-28 99.8 0.1 4.3e-19 69.6 0.0 2.2 1 1 1 2 2 2 2 DDHD domain DUF3089 PF11288.8 ORF61692 - 4.4e-06 26.4 0.0 8.3e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3089) Lipase_3 PF01764.25 ORF61692 - 7.4e-06 25.9 0.1 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF61692 - 0.024 13.9 0.3 0.1 11.9 0.1 1.9 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 ORF61692 - 0.048 13.5 0.1 5.2 6.8 0.0 2.3 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF61692 - 0.052 14.1 5.4 0.099 13.2 5.3 1.6 1 1 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF61692 - 0.088 12.4 0.3 2.2 7.9 0.0 2.3 3 0 0 3 3 3 0 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF61692 - 0.093 12.8 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Thioesterase domain Amidohydro_1 PF01979.20 ORF58781 - 6.2e-17 61.9 1.1 9.3e-17 61.4 1.1 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF58781 - 8.2e-06 25.5 4.2 2.9e-05 23.7 0.0 2.8 2 1 0 3 3 3 1 Amidohydrolase family Aminotran_1_2 PF00155.21 ORF52055 - 3.6e-69 233.7 0.0 4.1e-69 233.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 ORF52055 - 2.1e-05 24.0 0.1 6.7e-05 22.3 0.1 2.0 3 1 0 3 3 3 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 ORF52055 - 0.00013 20.6 0.0 0.00021 20.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 ORF52055 - 0.0052 15.8 0.0 0.0099 14.9 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 ORF52055 - 0.0091 15.3 0.5 4.3 6.5 0.1 2.8 3 0 0 3 3 3 2 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 ORF52055 - 0.15 10.8 0.0 0.53 8.9 0.0 1.8 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain YabA PF06156.13 ORF50804 - 0.1 13.2 5.4 0.14 12.8 3.6 2.3 2 0 0 2 2 2 0 Initiation control protein YabA CCDC-167 PF15188.6 ORF50804 - 1.4 9.3 10.5 2.4 8.5 3.1 3.5 3 1 0 3 3 3 0 Coiled-coil domain-containing protein 167 Prefoldin_2 PF01920.20 ORF50804 - 6.3 6.8 12.4 2 8.4 6.1 3.1 3 0 0 3 3 3 0 Prefoldin subunit TraB PF01963.17 ORF47567 - 6.7e-05 22.9 0.0 0.00022 21.2 0.0 1.8 2 0 0 2 2 2 1 TraB family PCI PF01399.27 ORF43595 - 2.6e-11 44.0 2.0 2.6e-11 44.0 2.0 2.3 2 1 0 2 2 2 1 PCI domain DUF3605 PF12239.8 ORF43595 - 0.0056 17.0 1.0 0.01 16.2 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3605) Shugoshin_N PF07558.11 ORF43595 - 3.1 7.7 11.1 10 6.1 0.0 3.3 4 0 0 4 4 4 0 Shugoshin N-terminal coiled-coil region MutS_III PF05192.18 ORF43595 - 9.5 6.4 8.0 7.8 6.7 2.9 2.3 1 1 0 2 2 2 0 MutS domain III BTB PF00651.31 ORF35990 - 9.2e-22 77.4 2.7 7.2e-21 74.5 0.4 2.5 1 1 1 2 2 2 1 BTB/POZ domain BACK PF07707.15 ORF35990 - 0.028 14.5 2.9 0.032 14.3 0.3 2.4 2 1 0 3 3 3 0 BTB And C-terminal Kelch Rtt106 PF08512.12 ORF33362 - 5.8e-23 81.1 0.1 1.2e-22 80.1 0.1 1.6 1 0 0 1 1 1 1 Histone chaperone Rttp106-like BUD22 PF09073.10 ORF33362 - 2.9 7.1 22.2 0.14 11.5 16.1 1.8 2 0 0 2 2 2 0 BUD22 Patched PF02460.18 ORF26828 - 4.3e-33 114.4 0.7 7e-33 113.7 0.7 1.3 1 1 0 1 1 1 1 Patched family MMPL PF03176.15 ORF26828 - 0.018 14.0 8.8 0.043 12.8 9.1 1.4 2 0 0 2 2 2 0 MMPL family SecD_SecF PF02355.16 ORF26828 - 0.44 9.9 9.0 0.017 14.5 3.2 1.5 2 0 0 2 2 2 0 Protein export membrane protein Acyl_transf_3 PF01757.22 ORF23442 - 3e-13 49.6 31.4 3.7e-13 49.3 31.4 1.1 1 0 0 1 1 1 1 Acyltransferase family E1_dh PF00676.20 ORF22084 - 8.2e-57 192.4 0.1 1e-56 192.1 0.1 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component Transket_pyr PF02779.24 ORF22084 - 1.8e-10 40.8 0.1 2.3e-09 37.2 0.0 2.4 3 0 0 3 3 3 1 Transketolase, pyrimidine binding domain R2K_2 PF18299.1 ORF22084 - 0.045 13.6 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 2 TnpW PF14202.6 ORF22084 - 0.049 13.4 0.0 0.12 12.2 0.0 1.7 1 0 0 1 1 1 0 Transposon-encoded protein TnpW DUF736 PF05284.12 ORF22084 - 0.11 12.4 0.0 0.48 10.3 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF736) Glyco_transf_11 PF01531.16 ORF17970 - 0.055 12.7 0.0 0.095 11.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 11 Nucleotid_trans PF03407.16 ORF17970 - 0.11 12.5 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 Nucleotide-diphospho-sugar transferase Acyl_transf_3 PF01757.22 ORF112529 - 3e-13 49.6 31.4 3.7e-13 49.3 31.4 1.1 1 0 0 1 1 1 1 Acyltransferase family AAA_21 PF13304.6 ORF111549 - 3.4e-08 33.7 0.6 6.5e-08 32.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF111549 - 1.1e-06 29.2 0.1 3.2e-06 27.7 0.0 1.8 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF111549 - 0.0014 18.1 0.0 0.002 17.6 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF111549 - 0.093 13.0 0.1 0.51 10.6 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Helicase_C PF00271.31 ORF109567 - 0.057 13.8 0.1 0.21 11.9 0.1 1.9 1 1 0 1 1 1 0 Helicase conserved C-terminal domain TraB PF01963.17 ORF100116 - 6.7e-05 22.9 0.0 0.00022 21.2 0.0 1.8 2 0 0 2 2 2 1 TraB family OAD_gamma PF04277.13 ORF97898 - 7 7.3 5.3 24 5.6 0.8 2.8 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain DUF2451 PF10474.9 ORF9691 - 0.0022 17.8 0.9 0.026 14.3 0.9 2.1 1 1 0 1 1 1 1 Protein of unknown function C-terminus (DUF2451) DHquinase_II PF01220.19 ORF9691 - 0.18 11.5 1.4 0.56 9.9 0.1 2.4 2 1 0 2 2 2 0 Dehydroquinase class II Exonuc_VII_L PF02601.15 ORF9691 - 0.57 9.7 11.0 0.55 9.8 2.0 2.2 2 0 0 2 2 2 0 Exonuclease VII, large subunit Ntox16 PF15523.6 ORF9691 - 0.8 10.0 4.0 1.8 8.8 0.0 3.0 3 0 0 3 3 3 0 Novel toxin 16 CENP-F_leu_zip PF10473.9 ORF9691 - 4.9 7.2 17.4 0.091 12.8 6.0 2.9 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Sulfotransfer_1 PF00685.27 ORF95409 - 1.7e-13 50.6 1.1 2.5e-12 46.8 0.7 2.2 2 0 0 2 2 2 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF95409 - 9.6e-08 32.7 0.2 1.4e-06 28.9 0.1 2.4 3 0 0 3 3 3 1 Sulfotransferase family JAB PF01398.21 ORF8973 - 1.5e-06 28.2 0.5 3.1e-06 27.1 0.5 1.5 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease PAP_assoc PF03828.19 ORF84082 - 4.4e-06 26.8 0.1 9.6e-06 25.7 0.1 1.6 1 0 0 1 1 1 1 Cid1 family poly A polymerase NTP_transf_2 PF01909.23 ORF84082 - 0.00083 19.6 0.0 0.0026 18.0 0.0 1.8 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 ORF84082 - 0.0029 17.6 0.0 0.0084 16.2 0.0 1.7 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase PAP_central PF04928.17 ORF84082 - 0.14 11.1 0.0 0.23 10.4 0.0 1.4 1 0 0 1 1 1 0 Poly(A) polymerase central domain Ndc80_HEC PF03801.13 ORF84082 - 0.17 11.5 0.0 1.7 8.2 0.0 2.1 2 0 0 2 2 2 0 HEC/Ndc80p family Amidohydro_1 PF01979.20 ORF82671 - 4.1e-46 157.9 0.0 5.5e-46 157.5 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF82671 - 1.3e-07 31.4 0.0 2.1e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.22 ORF82671 - 0.0037 16.6 0.0 0.0071 15.7 0.0 1.4 1 0 0 1 1 1 1 Adenosine/AMP deaminase DUF2070 PF09843.9 ORF78792 - 0.0056 15.0 0.4 0.0079 14.5 0.4 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) HopW1-1 PF15457.6 ORF78792 - 0.21 10.8 0.5 0.32 10.2 0.5 1.1 1 0 0 1 1 1 0 Type III T3SS secreted effector HopW1-1/HopPmaA Metallophos PF00149.28 ORF60466 - 1.3e-10 42.1 2.7 2e-10 41.5 2.7 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase CS PF04969.16 ORF58864 - 0.024 15.7 0.0 0.049 14.6 0.0 1.6 1 0 0 1 1 1 0 CS domain Rb_C PF08934.10 ORF58864 - 0.12 12.1 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Rb C-terminal domain DNA_pol_A_exoN PF18305.1 ORF53679 - 0.042 14.1 2.4 0.1 12.9 2.4 1.6 1 0 0 1 1 1 0 3' to 5' exonuclease C-terminal domain Metallophos_C PF14008.6 ORF53611 - 7.5e-18 65.2 0.6 1.6e-17 64.1 0.6 1.6 1 0 0 1 1 1 1 Iron/zinc purple acid phosphatase-like protein C Metallophos PF00149.28 ORF53611 - 4.6e-16 59.9 0.0 7.3e-16 59.3 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks30.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks30.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks30.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks30.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:09:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF772 PF05598.11 NODE_67617_length_235_cov_1.220000_g59676_i0reverse_frame_3 - 0.11 12.5 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Transposase domain (DUF772) HAMP_N3 PF18575.1 NODE_67617_length_235_cov_1.220000_g59676_i0reverse_frame_2 - 0.0073 15.9 0.0 3.7 7.2 0.0 2.2 2 0 0 2 2 2 2 HAMP N-terminal domain 3 MRAP PF15183.6 NODE_67614_length_235_cov_1.245000_g59673_i0forward_frame_2 - 0.034 14.1 0.0 0.039 13.9 0.0 1.1 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family UL45 PF05473.12 NODE_67613_length_235_cov_1.255000_g59672_i0reverse_frame_3 - 0.027 14.1 0.3 0.031 13.9 0.3 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF5383 PF17355.2 NODE_67613_length_235_cov_1.255000_g59672_i0reverse_frame_3 - 0.091 13.1 0.1 0.097 13.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Vma12 PF11712.8 NODE_67613_length_235_cov_1.255000_g59672_i0reverse_frame_3 - 0.34 11.0 1.7 0.38 10.8 1.7 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase TMEM154 PF15102.6 NODE_67612_length_235_cov_1.260000_g59671_i0forward_frame_2 - 0.011 15.6 0.9 0.013 15.4 0.9 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF3328 PF11807.8 NODE_67612_length_235_cov_1.260000_g59671_i0forward_frame_2 - 0.14 11.9 0.0 0.14 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) DUF1147 PF06615.11 NODE_67608_length_235_cov_1.305000_g59667_i0reverse_frame_2 - 0.18 11.8 0.3 6.9 6.8 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1147) PLA2G12 PF06951.11 NODE_67607_length_235_cov_1.305000_g59666_i0forward_frame_2 - 0.091 12.7 0.0 0.093 12.6 0.0 1.1 1 0 0 1 1 1 0 Group XII secretory phospholipase A2 precursor (PLA2G12) DUF2370 PF10176.9 NODE_67606_length_235_cov_1.330000_g59665_i0reverse_frame_2 - 0.025 14.2 1.0 0.029 14.0 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) CAP_N PF01213.19 NODE_67604_length_235_cov_1.350000_g59663_i0forward_frame_2 - 0.039 13.4 1.2 0.045 13.2 1.2 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal IBV_3A PF03617.13 NODE_67603_length_235_cov_1.350000_g59662_i0reverse_frame_2 - 0.083 12.9 1.6 0.14 12.1 1.6 1.4 1 0 0 1 1 1 0 IBV 3A protein YqfQ PF14181.6 NODE_67598_length_235_cov_1.420000_g59657_i0reverse_frame_2 - 5.1 7.3 8.9 5.8 7.1 8.9 1.1 1 0 0 1 1 1 0 YqfQ-like protein CPP1-like PF11833.8 NODE_67598_length_235_cov_1.420000_g59657_i0forward_frame_2 - 2 8.0 8.3 2.2 7.9 8.3 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Peptidase_M66 PF10462.9 NODE_67593_length_235_cov_1.445000_g59652_i0forward_frame_3 - 0.2 10.5 0.5 0.24 10.3 0.5 1.0 1 0 0 1 1 1 0 Peptidase M66 Filament_head PF04732.14 NODE_67593_length_235_cov_1.445000_g59652_i0forward_frame_2 - 0.076 13.9 2.3 0.09 13.7 0.7 1.7 2 0 0 2 2 2 0 Intermediate filament head (DNA binding) region DUF3796 PF12676.7 NODE_67587_length_235_cov_1.495000_g59646_i0reverse_frame_3 - 2.3 8.7 10.8 0.21 12.0 6.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3796) SUIM_assoc PF16619.5 NODE_67587_length_235_cov_1.495000_g59646_i0forward_frame_3 - 0.00014 21.9 8.0 0.0078 16.3 8.0 2.1 1 1 0 1 1 1 1 Unstructured region C-term to UIM in Ataxin3 CSN7a_helixI PF18392.1 NODE_67586_length_235_cov_1.500000_g59645_i0reverse_frame_3 - 0.093 12.7 0.2 0.13 12.2 0.2 1.3 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain Pox_L3_FP4 PF03339.14 NODE_67585_length_235_cov_1.515000_g59644_i0reverse_frame_3 - 0.086 11.8 0.2 0.091 11.7 0.2 1.0 1 0 0 1 1 1 0 Poxvirus L3/FP4 protein Kinesin PF00225.23 NODE_67584_length_235_cov_1.520000_g59643_i0forward_frame_2 - 2.6e-15 56.2 0.2 2.7e-15 56.1 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_67584_length_235_cov_1.520000_g59643_i0forward_frame_2 - 0.00014 21.8 0.1 0.00018 21.5 0.1 1.2 1 0 0 1 1 1 1 Microtubule binding DUF5402 PF17393.2 NODE_67584_length_235_cov_1.520000_g59643_i0forward_frame_2 - 0.095 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5402) CREPT PF16566.5 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.03 14.5 4.6 0.04 14.1 4.6 1.2 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour ZnuA PF01297.17 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.037 13.4 0.9 0.038 13.4 0.9 1.2 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Phage_Mu_Gam PF07352.12 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.048 13.6 4.3 0.057 13.3 4.3 1.1 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein DUF1151 PF06625.11 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.055 13.4 6.0 0.061 13.3 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1151) Prefoldin_2 PF01920.20 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.064 13.2 1.6 0.064 13.2 1.6 2.1 1 1 0 2 2 2 0 Prefoldin subunit DUF4337 PF14235.6 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.072 13.2 3.5 0.08 13.1 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) CdvA PF18822.1 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.074 12.9 9.1 0.05 13.4 7.2 1.6 1 1 0 1 1 1 0 CdvA-like coiled-coil domain Snapin_Pallidin PF14712.6 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.11 12.9 5.9 0.14 12.6 5.9 1.2 1 0 0 1 1 1 0 Snapin/Pallidin Atg14 PF10186.9 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.16 11.1 5.4 0.17 10.9 5.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2203 PF09969.9 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.16 12.7 1.9 0.18 12.5 1.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) CALCOCO1 PF07888.11 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.19 10.6 10.0 0.31 9.9 10.0 1.3 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like PI3K_P85_iSH2 PF16454.5 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.31 10.6 10.7 0.98 9.0 4.5 2.0 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF1003 PF06210.11 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.46 10.6 5.3 0.51 10.5 4.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) FapA PF03961.13 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.84 8.2 7.3 0.93 8.0 7.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A TCR_zetazeta PF11628.8 NODE_67581_length_235_cov_1.550000_g59640_i0forward_frame_3 - 0.26 11.0 5.0 0.47 10.2 5.0 1.4 1 0 0 1 1 1 0 T-cell surface glycoprotein CD3 zeta chain Auto_anti-p27 PF06677.12 NODE_67575_length_235_cov_1.590000_g59634_i0forward_frame_2 - 0.53 10.5 1.9 0.76 10.0 0.3 1.9 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF2149 PF09919.9 NODE_67574_length_235_cov_1.600000_g59633_i0forward_frame_2 - 0.063 13.5 0.4 0.11 12.8 0.4 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) DEK_C PF08766.11 NODE_67573_length_235_cov_1.620000_g59632_i0reverse_frame_3 - 0.036 14.0 0.8 0.069 13.1 0.8 1.4 1 0 0 1 1 1 0 DEK C terminal domain Tn7_Tnp_TnsA_C PF08721.11 NODE_67573_length_235_cov_1.620000_g59632_i0reverse_frame_2 - 0.057 14.1 0.8 0.064 13.9 0.8 1.1 1 0 0 1 1 1 0 TnsA endonuclease C terminal zf-C3HC4_4 PF15227.6 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 2.9e-08 33.7 3.7 4.5e-08 33.1 3.6 1.4 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 7.9e-07 29.0 4.7 5.9e-06 26.2 4.7 2.0 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 1.7e-06 27.8 4.4 2.8e-06 27.1 4.3 1.4 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 2.9e-05 23.8 5.2 7.3e-05 22.5 5.6 1.6 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 7.9e-05 22.4 2.1 0.00011 22.0 2.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.0002 21.6 4.5 0.0009 19.5 4.9 1.8 1 1 1 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.00024 21.0 4.3 0.00037 20.4 3.9 1.6 1 1 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.00061 19.6 2.8 0.0015 18.4 2.8 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.0011 19.0 0.3 0.0013 18.8 0.3 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.0013 18.6 1.1 0.0016 18.2 1.1 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Baculo_IE-1 PF05290.11 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.0021 18.0 2.2 0.0023 17.9 2.2 1.1 1 0 0 1 1 1 1 Baculovirus immediate-early protein (IE-0) zf-rbx1 PF12678.7 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.0022 18.2 0.6 0.003 17.8 0.6 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.028 14.5 1.7 0.037 14.2 1.7 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-RING_6 PF14835.6 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.029 14.2 0.5 0.038 13.9 0.5 1.2 1 0 0 1 1 1 0 zf-RING of BARD1-type protein FYVE PF01363.21 NODE_67572_length_235_cov_1.625000_g59631_i0forward_frame_3 - 0.055 13.6 1.9 0.15 12.2 1.9 1.7 1 1 0 1 1 1 0 FYVE zinc finger ABC_tran PF00005.27 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 4e-10 40.3 0.0 5.2e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.00017 21.2 0.0 0.00026 20.7 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.0019 18.1 0.1 0.0027 17.6 0.1 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.003 17.5 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.0032 18.0 0.0 0.0042 17.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_27 PF13514.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.01 15.5 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.062 13.0 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.11 12.1 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.13 11.7 0.0 0.22 10.9 0.0 1.4 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain YniB PF14002.6 NODE_67569_length_235_cov_1.650000_g59628_i0forward_frame_3 - 1.6e-13 50.7 0.4 5e-13 49.2 0.3 1.7 2 0 0 2 2 2 1 YniB-like protein RseC_MucC PF04246.12 NODE_67569_length_235_cov_1.650000_g59628_i0forward_frame_3 - 0.014 15.4 0.2 0.015 15.2 0.2 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Acyl-CoA_dh_M PF02770.19 NODE_67567_length_235_cov_1.685000_g59626_i0reverse_frame_2 - 0.11 12.7 0.1 0.18 12.0 0.1 1.5 1 1 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain S-AdoMet_synt_M PF02772.16 NODE_67565_length_235_cov_1.700000_g59624_i0reverse_frame_3 - 0.11 12.8 0.4 0.12 12.7 0.4 1.0 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, central domain EamA PF00892.20 NODE_67564_length_235_cov_1.765000_g59623_i0reverse_frame_3 - 0.00052 20.2 0.2 0.00064 19.9 0.2 1.2 1 0 0 1 1 1 1 EamA-like transporter family DUF3524 PF12038.8 NODE_67564_length_235_cov_1.765000_g59623_i0reverse_frame_3 - 0.026 14.3 0.1 0.029 14.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) Actin_micro PF17003.5 NODE_67562_length_235_cov_1.780000_g59621_i0reverse_frame_3 - 0.035 13.3 2.1 0.036 13.2 2.1 1.0 1 0 0 1 1 1 0 Putative actin-like family T4SS-DNA_transf PF02534.14 NODE_67562_length_235_cov_1.780000_g59621_i0reverse_frame_3 - 0.1 11.3 0.7 0.12 11.1 0.7 1.0 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer zf-RING_12 PF17976.1 NODE_67561_length_235_cov_1.785000_g59620_i0reverse_frame_2 - 0.023 15.0 0.9 0.041 14.1 0.9 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF5439 PF17507.2 NODE_67560_length_235_cov_1.790000_g59619_i0reverse_frame_2 - 0.13 12.5 4.4 0.16 12.2 4.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5439) DUF1746 PF08508.10 NODE_67557_length_235_cov_1.800000_g59616_i0reverse_frame_3 - 0.094 13.1 4.2 0.11 12.9 4.2 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1746) HlyE PF06109.13 NODE_67557_length_235_cov_1.800000_g59616_i0forward_frame_2 - 0.00011 21.7 0.0 0.00015 21.2 0.0 1.2 1 0 0 1 1 1 1 Haemolysin E (HlyE) Methyltransf_PK PF05891.12 NODE_67556_length_235_cov_1.805000_g59615_i0reverse_frame_3 - 0.12 11.9 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase CBP4 PF07960.11 NODE_67555_length_235_cov_1.820000_g59614_i0reverse_frame_3 - 0.0076 16.1 0.2 0.0086 15.9 0.2 1.1 1 0 0 1 1 1 1 CBP4 Lip_prot_lig_C PF10437.9 NODE_67551_length_235_cov_1.890000_g59610_i0forward_frame_3 - 0.044 13.8 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus Lamprin PF06403.11 NODE_67550_length_235_cov_1.895000_g59609_i0forward_frame_3 - 0.0029 17.6 2.3 0.0035 17.3 2.3 1.1 1 0 0 1 1 1 1 Lamprin Sporozoite_P67 PF05642.11 NODE_67550_length_235_cov_1.895000_g59609_i0forward_frame_3 - 0.23 9.5 1.4 0.25 9.4 1.4 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Lamprin PF06403.11 NODE_67550_length_235_cov_1.895000_g59609_i0forward_frame_2 - 0.0084 16.1 0.5 0.0097 15.9 0.5 1.1 1 0 0 1 1 1 1 Lamprin DUF2170 PF09938.9 NODE_67548_length_235_cov_1.955000_g59607_i0reverse_frame_2 - 0.16 11.7 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2170) Homeobox_KN PF05920.11 NODE_67547_length_235_cov_1.960000_g59606_i0reverse_frame_2 - 5.8e-11 42.1 1.3 8.1e-11 41.6 1.3 1.1 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_67547_length_235_cov_1.960000_g59606_i0reverse_frame_2 - 3.2e-07 30.1 0.5 4.4e-07 29.7 0.5 1.2 1 0 0 1 1 1 1 Homeodomain CLIP_SPH_Scar PF18399.1 NODE_67545_length_235_cov_1.985000_g59604_i0forward_frame_2 - 0.0018 18.3 0.3 0.0027 17.8 0.3 1.3 1 1 0 1 1 1 1 Clip-domain serine protease homolog Scarface DUF4052 PF13261.6 NODE_67543_length_235_cov_2.015000_g59602_i0forward_frame_3 - 0.048 13.5 0.0 0.052 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4052) FliD_N PF02465.18 NODE_67541_length_235_cov_2.075000_g59600_i0reverse_frame_2 - 0.063 14.0 0.9 2.9 8.6 0.1 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF3810 PF12725.7 NODE_67540_length_235_cov_2.095000_g59599_i0forward_frame_2 - 1.5 8.1 5.2 1.6 8.0 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) ORC4_C PF14629.6 NODE_67535_length_235_cov_2.190000_g59594_i0reverse_frame_3 - 0.12 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus RIB43A PF05914.12 NODE_67532_length_235_cov_2.235000_g59591_i0reverse_frame_2 - 0.0078 15.0 5.3 0.0094 14.7 5.3 1.1 1 0 0 1 1 1 1 RIB43A MtrF PF09472.10 NODE_67532_length_235_cov_2.235000_g59591_i0reverse_frame_2 - 0.051 13.0 0.3 1.1 8.7 0.0 2.1 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Synapsin_N PF10581.9 NODE_67531_length_235_cov_2.255000_g59590_i0forward_frame_2 - 0.29 11.1 3.0 60 3.7 0.0 3.4 2 1 1 3 3 3 0 Synapsin N-terminal Molybdopterin PF00384.22 NODE_67528_length_235_cov_2.355000_g59587_i0forward_frame_3 - 1.6e-08 34.0 0.0 1.8e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fzo_mitofusin PF04799.13 NODE_67527_length_235_cov_2.355000_g59586_i0reverse_frame_3 - 0.53 9.8 2.4 0.91 9.1 2.1 1.6 1 1 0 1 1 1 0 fzo-like conserved region PALP PF00291.25 NODE_67521_length_235_cov_2.540000_g59580_i0forward_frame_3 - 5.1e-15 55.6 0.0 6e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF4223 PF13978.6 NODE_67519_length_235_cov_2.540000_g59578_i0reverse_frame_3 - 0.096 12.7 0.3 0.15 12.1 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4223) Ras PF00071.22 NODE_67518_length_235_cov_2.585000_g59577_i0reverse_frame_3 - 0.0011 18.6 0.0 0.0011 18.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Ras PF00071.22 NODE_67518_length_235_cov_2.585000_g59577_i0reverse_frame_2 - 4e-12 46.0 0.1 4.7e-12 45.8 0.1 1.0 1 0 0 1 1 1 1 Ras family DNA_pol_E_B PF04042.16 NODE_67518_length_235_cov_2.585000_g59577_i0reverse_frame_2 - 0.018 14.4 0.0 0.019 14.4 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B HTH_45 PF14947.6 NODE_67516_length_235_cov_2.605000_g59575_i0reverse_frame_3 - 0.044 13.8 0.1 0.059 13.4 0.1 1.4 1 1 0 1 1 1 0 Winged helix-turn-helix RNA_capsid PF03035.14 NODE_67510_length_235_cov_2.805000_g59569_i0forward_frame_3 - 0.051 13.6 0.0 0.057 13.4 0.0 1.0 1 0 0 1 1 1 0 Calicivirus putative RNA polymerase/capsid protein Sacchrp_dh_NADP PF03435.18 NODE_67508_length_235_cov_2.980000_g59567_i0forward_frame_3 - 0.037 14.3 0.0 0.041 14.2 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Sucrose_synth PF00862.19 NODE_67506_length_235_cov_3.000000_g59565_i0reverse_frame_3 - 0.055 11.8 0.0 0.071 11.4 0.0 1.0 1 0 0 1 1 1 0 Sucrose synthase RE_NgoFVII PF09565.10 NODE_67504_length_235_cov_3.035000_g59563_i0forward_frame_2 - 0.14 11.4 0.1 0.14 11.4 0.1 1.0 1 0 0 1 1 1 0 NgoFVII restriction endonuclease KGG PF10685.9 NODE_67501_length_235_cov_3.285000_g59560_i0reverse_frame_3 - 0.02 15.2 4.7 0.036 14.4 4.7 1.4 1 0 0 1 1 1 0 Stress-induced bacterial acidophilic repeat motif Mob_synth_C PF06463.13 NODE_67501_length_235_cov_3.285000_g59560_i0forward_frame_2 - 0.018 14.9 0.4 0.022 14.7 0.4 1.1 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C LPP PF04728.13 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.00013 22.3 3.4 0.0044 17.4 0.5 2.1 2 0 0 2 2 2 1 Lipoprotein leucine-zipper HALZ PF02183.18 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.00059 20.0 6.6 0.00068 19.8 3.2 2.2 1 1 1 2 2 2 1 Homeobox associated leucine zipper SPOB_ab PF14682.6 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.0032 17.5 1.8 0.0038 17.3 1.8 1.1 1 0 0 1 1 1 1 Sporulation initiation phospho-transferase B, C-terminal DUF4795 PF16043.5 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.0047 16.5 9.5 0.0051 16.4 9.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) SLIDE PF09111.10 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.0052 16.8 3.0 0.0052 16.8 3.0 1.6 1 1 1 2 2 2 1 SLIDE YkyA PF10368.9 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.011 15.4 14.6 0.012 15.4 14.6 1.1 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein TMPIT PF07851.13 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.011 15.0 8.1 0.011 15.0 8.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein ADIP PF11559.8 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.015 15.4 9.2 0.019 15.0 9.2 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF2067 PF09840.9 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.017 14.7 1.4 0.018 14.6 1.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) DivIC PF04977.15 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.017 14.9 10.5 0.64 9.8 2.8 2.1 1 1 1 2 2 2 0 Septum formation initiator SPOUT_MTase PF02590.17 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.028 14.4 1.4 0.034 14.1 1.4 1.1 1 0 0 1 1 1 0 Predicted SPOUT methyltransferase NRBF2 PF08961.10 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.033 13.8 2.6 0.033 13.8 2.6 1.9 1 1 1 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator Jnk-SapK_ap_N PF09744.9 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.035 14.3 9.6 0.046 14.0 9.6 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 bZIP_1 PF00170.21 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.056 13.6 4.2 0.056 13.6 4.2 2.1 1 1 1 2 2 2 0 bZIP transcription factor CALCOCO1 PF07888.11 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.071 12.0 8.6 0.073 11.9 8.6 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Rootletin PF15035.6 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.095 12.7 9.6 0.1 12.6 9.6 1.1 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion DASH_Dam1 PF08653.10 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.11 12.3 4.9 3.1 7.7 0.5 2.4 2 1 0 2 2 2 0 DASH complex subunit Dam1 VPS38 PF17649.1 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.12 11.2 8.5 0.13 11.1 8.5 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting 38 KAR9 PF08580.10 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.14 10.7 6.2 0.14 10.7 6.2 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 Atg14 PF10186.9 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.25 10.4 6.4 0.28 10.2 6.4 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlaC_arch PF05377.11 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.32 11.4 7.6 0.52 10.7 2.1 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) GrpE PF01025.19 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.36 10.5 9.7 0.44 10.2 9.2 1.4 1 1 0 1 1 1 0 GrpE DUF3450 PF11932.8 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.44 9.8 7.4 0.5 9.6 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ZapB PF06005.12 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.49 10.9 10.3 1.8 9.1 10.3 1.8 1 1 0 1 1 1 0 Cell division protein ZapB YabA PF06156.13 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 1.1 9.9 8.8 2.5 8.8 8.8 1.6 1 1 0 1 1 1 0 Initiation control protein YabA DUF724 PF05266.14 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 1.2 8.9 9.3 1.3 8.8 9.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) V_ATPase_I PF01496.19 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 3 5.7 7.4 3.3 5.5 7.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MepB PF08877.10 NODE_67492_length_235_cov_15.730000_g59551_i0forward_frame_3 - 0.02 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 MepB protein MORN PF02493.20 NODE_67490_length_235_cov_21.555000_g59549_i0reverse_frame_2 - 0.0051 16.6 1.0 0.024 14.5 0.0 2.4 3 0 0 3 3 3 1 MORN repeat Tudor_4 PF18358.1 NODE_67486_length_235_cov_24.115000_g59545_i0forward_frame_2 - 0.057 13.0 0.1 0.096 12.3 0.1 1.4 1 0 0 1 1 1 0 Histone methyltransferase Tudor domain SUV3_C PF12513.8 NODE_67481_length_235_cov_32.130000_g59540_i0reverse_frame_2 - 2.7e-11 43.2 0.0 3.5e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial degradasome RNA helicase subunit C terminal ELYS PF13934.6 NODE_67480_length_235_cov_34.120000_g59539_i0forward_frame_2 - 0.14 12.1 0.0 0.14 12.1 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore complex assembly DUF1736 PF08409.11 NODE_67479_length_235_cov_36.560000_g59538_i0forward_frame_3 - 0.14 12.1 0.0 0.14 12.1 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1736) Ribosomal_S28e PF01200.18 NODE_67476_length_235_cov_40.900000_g59535_i0forward_frame_2 - 6.4e-22 77.3 0.2 7.9e-22 77.0 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S28e ETRAMP PF09716.10 NODE_67474_length_235_cov_42.660000_g59533_i0forward_frame_2 - 0.33 11.0 2.1 0.52 10.4 2.1 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF4216 PF13952.6 NODE_67473_length_235_cov_42.690000_g59532_i0reverse_frame_3 - 0.1 13.0 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4216) JSRP PF15312.6 NODE_67465_length_235_cov_47.445000_g59524_i0forward_frame_3 - 0.15 12.0 0.2 0.2 11.6 0.2 1.2 1 0 0 1 1 1 0 Junctional sarcoplasmic reticulum protein DUF4018 PF13210.6 NODE_67463_length_235_cov_48.150000_g59522_i0reverse_frame_3 - 0.54 10.0 5.2 0.65 9.7 5.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) PRAS PF15798.5 NODE_67460_length_235_cov_51.630000_g59519_i0forward_frame_3 - 0.034 14.7 0.0 0.039 14.5 0.0 1.0 1 0 0 1 1 1 0 Proline-rich AKT1 substrate 1 DUF2938 PF11158.8 NODE_67456_length_235_cov_58.785000_g59515_i0reverse_frame_3 - 0.03 13.8 0.0 0.033 13.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2938) cEGF PF12662.7 NODE_67456_length_235_cov_58.785000_g59515_i0forward_frame_2 - 0.083 12.8 0.4 0.12 12.3 0.4 1.2 1 0 0 1 1 1 0 Complement Clr-like EGF-like DUF1068 PF06364.12 NODE_67455_length_235_cov_62.260000_g59514_i0reverse_frame_2 - 0.025 14.5 0.5 0.026 14.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) SspH PF08141.12 NODE_67455_length_235_cov_62.260000_g59514_i0reverse_frame_2 - 0.032 14.4 0.1 0.048 13.8 0.1 1.2 1 0 0 1 1 1 0 Small acid-soluble spore protein H family CNOT1_TTP_bind PF16417.5 NODE_67454_length_235_cov_62.570000_g59513_i0reverse_frame_2 - 1.5e-23 83.0 0.5 1.7e-23 82.8 0.5 1.0 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain DUF1178 PF06676.11 NODE_67453_length_235_cov_64.275000_g59512_i0forward_frame_2 - 0.36 11.2 2.6 0.43 11.0 2.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) DUF3974 PF13120.6 NODE_67452_length_235_cov_64.590000_g59511_i0forward_frame_3 - 0.11 12.6 0.8 0.14 12.2 0.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) SPT_ssu-like PF11779.8 NODE_67450_length_235_cov_65.690000_g59509_i0forward_frame_2 - 0.0095 15.5 1.8 0.013 15.1 1.8 1.2 1 0 0 1 1 1 1 Small subunit of serine palmitoyltransferase-like PilJ PF13675.6 NODE_67445_length_235_cov_75.920000_g59504_i0forward_frame_3 - 0.21 11.6 0.0 0.24 11.5 0.0 1.1 1 0 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term Toxin_2 PF00451.19 NODE_67442_length_235_cov_80.935000_g59501_i0reverse_frame_3 - 0.035 14.4 0.7 0.035 14.4 0.7 1.6 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 Antimicrobial_6 PF08036.11 NODE_67438_length_235_cov_92.720000_g59497_i0reverse_frame_3 - 0.07 13.2 1.3 0.17 11.9 1.3 1.7 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide EcpB_C PF18649.1 NODE_67438_length_235_cov_92.720000_g59497_i0reverse_frame_3 - 0.1 12.6 0.2 0.12 12.3 0.2 1.1 1 0 0 1 1 1 0 EcpB C-terminal domain ARL6IP6 PF15062.6 NODE_67438_length_235_cov_92.720000_g59497_i0reverse_frame_2 - 0.036 14.2 1.2 0.051 13.7 0.5 1.5 2 0 0 2 2 2 0 Haemopoietic lineage transmembrane helix DUF4710 PF15828.5 NODE_67438_length_235_cov_92.720000_g59497_i0reverse_frame_2 - 0.2 11.8 8.6 0.41 10.8 0.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4710) HD_3 PF13023.6 NODE_67435_length_235_cov_96.635000_g59494_i0reverse_frame_2 - 0.088 12.7 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 HD domain DUF1641 PF07849.11 NODE_67434_length_235_cov_105.295000_g59493_i0forward_frame_2 - 0.0047 16.8 0.0 0.0079 16.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1641) DEFB136 PF17333.2 NODE_67432_length_235_cov_116.370000_g59491_i0forward_frame_2 - 0.014 15.3 2.0 0.015 15.3 0.4 1.8 2 0 0 2 2 2 0 Beta defensin 136 MerR PF00376.23 NODE_67429_length_235_cov_161.090000_g59488_i0forward_frame_3 - 0.13 12.0 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 MerR family regulatory protein DUF2023 PF09633.10 NODE_67429_length_235_cov_161.090000_g59488_i0forward_frame_2 - 0.043 14.0 0.1 0.044 13.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2023) ANXA2R PF15721.5 NODE_67425_length_235_cov_208.650000_g59484_i0reverse_frame_2 - 0.0054 17.3 0.0 0.006 17.1 0.0 1.1 1 0 0 1 1 1 1 Annexin-2 receptor NlpE_C PF17185.4 NODE_67425_length_235_cov_208.650000_g59484_i0forward_frame_2 - 0.11 12.7 0.0 0.13 12.5 0.0 1.0 1 0 0 1 1 1 0 NlpE C-terminal OB domain Asp PF00026.23 NODE_67422_length_235_cov_250.030000_g59481_i0reverse_frame_3 - 0.0082 15.6 0.0 0.0099 15.3 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF2784 PF10861.8 NODE_67418_length_235_cov_935.810000_g59477_i0forward_frame_3 - 0.11 12.6 1.5 0.14 12.2 1.5 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF2784) Trp_syntA PF00290.20 NODE_67416_length_235_cov_7535.730000_g59475_i0forward_frame_2 - 0.26 10.1 0.0 0.32 9.8 0.0 1.1 1 0 0 1 1 1 0 Tryptophan synthase alpha chain GED PF02212.18 NODE_67415_length_236_cov_0.766169_g59474_i0forward_frame_2 - 0.0087 16.2 0.2 0.013 15.7 0.1 1.3 1 1 0 1 1 1 1 Dynamin GTPase effector domain Shisa PF13908.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.00088 19.6 2.8 0.00089 19.6 2.8 1.0 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator TMEM154 PF15102.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.0019 18.1 2.0 0.0021 18.0 2.0 1.1 1 0 0 1 1 1 1 TMEM154 protein family LRRC37AB_C PF14914.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.0075 16.2 0.6 0.0082 16.1 0.6 1.1 1 0 0 1 1 1 1 LRRC37A/B like protein 1 C-terminal domain Orthoreo_P10 PF07204.11 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.012 15.6 0.2 0.012 15.5 0.2 1.2 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 Tmemb_cc2 PF10267.9 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.024 13.8 0.2 0.026 13.7 0.2 1.1 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein Adeno_E3_CR2 PF02439.15 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.026 14.3 9.8 0.05 13.4 9.8 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 TMIE PF16038.5 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.048 13.5 5.2 0.062 13.1 5.2 1.3 1 0 0 1 1 1 0 TMIE protein CD34_antigen PF06365.12 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.083 12.5 0.1 0.095 12.3 0.1 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family DUF4051 PF13260.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.23 11.2 3.1 0.33 10.7 3.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) EphA2_TM PF14575.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.39 11.6 3.0 0.56 11.1 3.0 1.3 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain 7tm_2 PF00002.24 NODE_67406_length_236_cov_1.114428_g59465_i0forward_frame_3 - 0.012 14.9 2.6 0.014 14.7 2.6 1.2 1 0 0 1 1 1 0 7 transmembrane receptor (Secretin family) DUF2890 PF11081.8 NODE_67405_length_236_cov_1.124378_g59464_i0forward_frame_3 - 0.0029 17.7 0.4 0.0031 17.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2890) BRX_assoc PF16627.5 NODE_67405_length_236_cov_1.124378_g59464_i0forward_frame_2 - 0.0049 17.0 0.1 0.0061 16.7 0.1 1.1 1 0 0 1 1 1 1 Unstructured region between BRX_N and BRX domain SLAIN PF15301.6 NODE_67404_length_236_cov_1.144279_g59463_i0forward_frame_2 - 0.098 11.9 0.1 0.099 11.9 0.1 1.1 1 0 0 1 1 1 0 SLAIN motif-containing family Rsm1 PF08600.10 NODE_67403_length_236_cov_1.174129_g59462_i0forward_frame_3 - 0.17 12.1 0.1 0.18 12.0 0.1 1.1 1 0 0 1 1 1 0 Rsm1-like TMEM189_B_dmain PF10520.9 NODE_67402_length_236_cov_1.174129_g59461_i0forward_frame_3 - 0.12 12.4 0.7 0.15 12.2 0.7 1.1 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain MaoC_dehydratas PF01575.19 NODE_67401_length_236_cov_1.179104_g59460_i0forward_frame_2 - 0.24 11.0 0.0 0.28 10.8 0.0 1.1 1 0 0 1 1 1 0 MaoC like domain DUF3954 PF13128.6 NODE_67397_length_236_cov_1.194030_g59456_i0forward_frame_3 - 0.046 13.5 0.4 0.073 12.9 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3954) Neuropep_like PF15161.6 NODE_67397_length_236_cov_1.194030_g59456_i0forward_frame_2 - 0.13 12.0 0.0 0.26 11.0 0.0 1.5 1 0 0 1 1 1 0 Neuropeptide-like PEX-2N PF09263.10 NODE_67394_length_236_cov_1.194030_g59453_i0forward_frame_3 - 0.14 12.5 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 Peroxisome biogenesis factor 1, N-terminal DUF2970 PF11174.8 NODE_67392_length_236_cov_1.223881_g59451_i0forward_frame_2 - 0.074 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2970) acVLRF1 PF18859.1 NODE_67389_length_236_cov_1.228856_g59448_i0reverse_frame_3 - 0.11 12.8 1.2 0.21 11.9 1.2 1.6 1 1 1 2 2 2 0 Actinobacteria/chloroflexi VLRF1 release factor Glyco_hydro_31 PF01055.26 NODE_67386_length_236_cov_1.268657_g59445_i0reverse_frame_3 - 1.4e-10 41.0 0.1 1.4e-10 41.0 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 SVM_signal PF12113.8 NODE_67385_length_236_cov_1.298507_g59444_i0reverse_frame_2 - 5.1e-05 23.1 0.1 5.1e-05 23.1 0.1 2.2 3 1 0 3 3 3 1 SVM protein signal sequence Pullulanase_Ins PF18494.1 NODE_67381_length_236_cov_1.353234_g59440_i0reverse_frame_2 - 0.085 13.3 0.0 0.087 13.3 0.0 1.1 1 0 0 1 1 1 0 Pullulanase Ins domain DUF1636 PF07845.11 NODE_67381_length_236_cov_1.353234_g59440_i0forward_frame_2 - 0.055 13.9 0.6 0.074 13.5 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1636) TTL PF03133.15 NODE_67378_length_236_cov_1.368159_g59437_i0reverse_frame_3 - 9.2e-17 61.1 0.2 1.1e-16 60.9 0.2 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Fijivirus_P9-2 PF06837.11 NODE_67378_length_236_cov_1.368159_g59437_i0forward_frame_2 - 0.078 12.4 1.3 0.087 12.3 1.3 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein EndIII_4Fe-2S PF10576.9 NODE_67377_length_236_cov_1.368159_g59436_i0reverse_frame_3 - 5 7.6 7.1 6.8 7.2 0.2 3.1 3 0 0 3 3 3 0 Iron-sulfur binding domain of endonuclease III Pyridox_oxase_2 PF12766.7 NODE_67376_length_236_cov_1.373134_g59435_i0reverse_frame_2 - 0.053 14.1 0.1 0.062 13.9 0.1 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase Mucin PF01456.17 NODE_67369_length_236_cov_1.472637_g59428_i0reverse_frame_2 - 0.25 11.3 18.5 0.27 11.2 18.5 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein TFIIF_alpha PF05793.12 NODE_67369_length_236_cov_1.472637_g59428_i0reverse_frame_2 - 0.5 8.9 1.1 0.54 8.8 1.1 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) TNF PF00229.18 NODE_67368_length_236_cov_1.477612_g59427_i0forward_frame_2 - 0.067 13.1 0.0 0.074 13.0 0.0 1.0 1 0 0 1 1 1 0 TNF(Tumour Necrosis Factor) family DUF1514 PF07438.11 NODE_67365_length_236_cov_1.507463_g59424_i0reverse_frame_3 - 0.16 11.9 1.7 10 6.1 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1514) Papilloma_E5 PF03025.14 NODE_67363_length_236_cov_1.527363_g59422_i0forward_frame_2 - 1.6 9.0 8.9 0.11 12.7 3.7 1.7 2 0 0 2 2 2 0 Papillomavirus E5 YlaC PF10777.9 NODE_67362_length_236_cov_1.557214_g59421_i0reverse_frame_3 - 1.4 8.8 6.6 1.1 9.0 5.9 1.3 1 1 0 1 1 1 0 Inner membrane protein YlaC ABC_tran PF00005.27 NODE_67362_length_236_cov_1.557214_g59421_i0forward_frame_3 - 2.5e-05 24.8 0.0 2.6e-05 24.8 0.0 1.0 1 0 0 1 1 1 1 ABC transporter Laminin_II PF06009.12 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.002 18.1 4.4 0.0022 18.0 4.4 1.0 1 0 0 1 1 1 1 Laminin Domain II DUF3450 PF11932.8 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.025 13.9 7.6 0.029 13.7 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Macoilin PF09726.9 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.057 12.0 4.7 0.064 11.8 4.7 1.0 1 0 0 1 1 1 0 Macoilin family DASH_Dam1 PF08653.10 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.1 12.4 4.0 4.9 7.0 0.2 2.2 1 1 1 2 2 2 0 DASH complex subunit Dam1 DivIC PF04977.15 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.34 10.7 9.2 0.19 11.5 2.1 2.0 1 1 1 2 2 2 0 Septum formation initiator WXG100 PF06013.12 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.83 9.9 5.6 7.1 6.9 0.7 2.0 1 1 1 2 2 2 0 Proteins of 100 residues with WXG bZIP_1 PF00170.21 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 1.1 9.5 8.3 2 8.5 6.8 1.8 1 1 1 2 2 2 0 bZIP transcription factor Peptidase_A24 PF01478.18 NODE_67356_length_236_cov_1.582090_g59415_i0reverse_frame_3 - 0.064 13.7 0.3 0.074 13.5 0.3 1.2 1 0 0 1 1 1 0 Type IV leader peptidase family Lectin_N PF03954.14 NODE_67355_length_236_cov_1.587065_g59414_i0forward_frame_2 - 6.1 6.6 8.8 10 5.9 3.3 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain DUF3270 PF11674.8 NODE_67354_length_236_cov_1.592040_g59413_i0reverse_frame_2 - 0.0028 17.8 1.0 0.0034 17.5 1.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) TMEM18 PF14770.6 NODE_67354_length_236_cov_1.592040_g59413_i0forward_frame_2 - 0.013 15.5 0.4 0.016 15.2 0.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 ERGIC_N PF13850.6 NODE_67354_length_236_cov_1.592040_g59413_i0forward_frame_2 - 0.058 13.7 3.5 4.2 7.8 1.7 2.1 1 1 1 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) MotB_plug PF13677.6 NODE_67354_length_236_cov_1.592040_g59413_i0forward_frame_2 - 4.3 7.0 5.3 11 5.6 1.2 2.2 2 1 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB PDZ_1 PF12812.7 NODE_67351_length_236_cov_1.592040_g59410_i0reverse_frame_3 - 0.074 13.1 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 PDZ-like domain TMEM107 PF14995.6 NODE_67339_length_236_cov_1.711443_g59398_i0reverse_frame_3 - 0.09 13.2 0.1 0.11 12.9 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein Thionin PF00321.17 NODE_67334_length_236_cov_1.766169_g59393_i0reverse_frame_3 - 0.016 15.7 0.9 0.031 14.8 0.9 1.5 1 0 0 1 1 1 0 Plant thionin DUF4347 PF14252.6 NODE_67334_length_236_cov_1.766169_g59393_i0forward_frame_3 - 0.025 14.4 0.0 0.027 14.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4347) TLV_coat PF00429.19 NODE_67332_length_236_cov_1.771144_g59391_i0reverse_frame_2 - 0.013 14.3 0.0 0.014 14.1 0.0 1.0 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) ABC_membrane PF00664.23 NODE_67325_length_236_cov_1.895522_g59384_i0reverse_frame_2 - 0.016 14.9 0.1 0.016 14.9 0.1 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region SecY PF00344.20 NODE_67325_length_236_cov_1.895522_g59384_i0reverse_frame_2 - 0.069 12.4 0.1 0.069 12.4 0.1 1.0 1 0 0 1 1 1 0 SecY translocase Toxin_TOLIP PF00087.21 NODE_67325_length_236_cov_1.895522_g59384_i0forward_frame_2 - 0.028 14.7 1.8 0.041 14.1 1.8 1.3 1 0 0 1 1 1 0 Snake toxin and toxin-like protein ALG3 PF05208.13 NODE_67320_length_236_cov_1.980100_g59379_i0reverse_frame_2 - 0.0013 18.3 2.3 0.0016 17.9 2.3 1.2 1 0 0 1 1 1 1 ALG3 protein ASC PF00858.24 NODE_67316_length_236_cov_1.990050_g59375_i0reverse_frame_2 - 0.062 12.2 0.1 0.074 12.0 0.1 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel Amb_V_allergen PF03913.13 NODE_67314_length_236_cov_1.995025_g59373_i0reverse_frame_2 - 0.1 12.5 0.1 0.15 12.0 0.1 1.2 1 0 0 1 1 1 0 Amb V Allergen SecIII_SopE_N PF05364.14 NODE_67310_length_236_cov_2.044776_g59369_i0reverse_frame_2 - 0.079 13.0 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus MTCP1 PF08991.10 NODE_67309_length_236_cov_2.069652_g59368_i0reverse_frame_2 - 0.077 13.2 7.2 0.12 12.6 7.2 1.4 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type DNA_pol_phi PF04931.13 NODE_67309_length_236_cov_2.069652_g59368_i0reverse_frame_2 - 0.17 10.0 1.6 0.19 9.8 1.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi SR-25 PF10500.9 NODE_67309_length_236_cov_2.069652_g59368_i0forward_frame_3 - 0.49 10.0 10.0 0.47 10.0 10.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Spt20 PF12090.8 NODE_67309_length_236_cov_2.069652_g59368_i0forward_frame_2 - 2.6 7.6 12.5 2.5 7.7 12.5 1.1 1 0 0 1 1 1 0 Spt20 family DHO_dh PF01180.21 NODE_67308_length_236_cov_2.104478_g59367_i0forward_frame_3 - 0.064 12.5 0.0 0.074 12.2 0.0 1.1 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase Anoctamin PF04547.12 NODE_67307_length_236_cov_2.144279_g59366_i0reverse_frame_3 - 1.5 7.5 7.8 1.7 7.4 7.8 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel Pkinase PF00069.25 NODE_67296_length_236_cov_2.467662_g59355_i0reverse_frame_3 - 8.8e-15 54.8 0.1 9.4e-15 54.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67296_length_236_cov_2.467662_g59355_i0reverse_frame_3 - 2.9e-08 33.3 0.0 3.1e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase BCMA-Tall_bind PF09257.10 NODE_67295_length_236_cov_2.482587_g59354_i0reverse_frame_3 - 0.022 14.8 0.4 0.045 13.9 0.4 1.5 1 0 0 1 1 1 0 BCMA, TALL-1 binding Pepdidase_M14_N PF18027.1 NODE_67294_length_236_cov_2.527363_g59353_i0reverse_frame_3 - 8.4e-07 29.3 0.5 8.8e-07 29.3 0.5 1.1 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks310.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks310.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks310.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks310.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ubiquitin PF00240.23 NODE_67291_length_236_cov_2.532338_g59350_i0reverse_frame_2 - 0.067 12.9 0.0 0.085 12.6 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin family Sugar_tr PF00083.24 NODE_67290_length_236_cov_2.537313_g59349_i0forward_frame_3 - 2e-12 46.7 0.0 2.2e-12 46.6 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Lung_7-TM_R PF06814.13 NODE_67289_length_236_cov_2.547264_g59348_i0reverse_frame_3 - 0.0075 15.6 0.1 0.0087 15.3 0.1 1.0 1 0 0 1 1 1 1 Lung seven transmembrane receptor DUF5424 PF17462.2 NODE_67286_length_236_cov_2.621891_g59345_i0forward_frame_2 - 0.042 13.8 0.2 0.042 13.8 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5424) PsiF_repeat PF07769.14 NODE_67282_length_236_cov_2.761194_g59341_i0reverse_frame_3 - 3.2e-10 39.7 2.8 3.2e-10 39.7 2.8 2.0 3 0 0 3 3 3 1 psiF repeat Toprim_N PF08275.11 NODE_67278_length_236_cov_2.925373_g59337_i0reverse_frame_3 - 4.3e-10 39.7 0.0 6e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 DNA primase catalytic core, N-terminal domain SANTA PF09133.10 NODE_67278_length_236_cov_2.925373_g59337_i0reverse_frame_3 - 0.047 14.2 0.0 0.053 14.0 0.0 1.3 1 1 0 1 1 1 0 SANTA (SANT Associated) DUF3482 PF11981.8 NODE_67278_length_236_cov_2.925373_g59337_i0reverse_frame_3 - 0.071 12.5 0.0 0.081 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Sp38 PF07354.12 NODE_67278_length_236_cov_2.925373_g59337_i0reverse_frame_3 - 0.18 11.2 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) RSN1_TM PF13967.6 NODE_67272_length_236_cov_3.388060_g59331_i0forward_frame_2 - 0.014 15.2 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport SHR3_chaperone PF08229.11 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_3 - 0.029 13.4 0.1 0.029 13.4 0.1 1.2 1 0 0 1 1 1 0 ER membrane protein SH3 Herpes_LMP2 PF07415.11 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_3 - 0.087 11.6 0.1 0.099 11.4 0.1 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein Herpes_glycop PF01528.16 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_2 - 0.056 12.3 0.0 0.059 12.2 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus glycoprotein M Mucin PF01456.17 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_2 - 0.2 11.7 0.7 0.22 11.5 0.7 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein ETRAMP PF09716.10 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_2 - 0.36 10.9 3.9 0.51 10.4 3.9 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Thymidylate_kin PF02223.17 NODE_67266_length_236_cov_3.597015_g59325_i0forward_frame_2 - 0.13 11.9 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Thymidylate kinase Reo_P9 PF06043.11 NODE_67265_length_236_cov_3.676617_g59324_i0reverse_frame_2 - 0.028 13.9 0.0 0.03 13.7 0.0 1.0 1 0 0 1 1 1 0 Reovirus P9-like family MPLKIP PF15502.6 NODE_67262_length_236_cov_5.343284_g59321_i0reverse_frame_3 - 0.026 14.7 0.3 0.026 14.7 0.3 1.6 2 0 0 2 2 2 0 M-phase-specific PLK1-interacting protein SP_C-Propep PF08999.10 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_2 - 0.25 11.1 6.4 0.3 10.9 6.4 1.1 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF4131 PF13567.6 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_2 - 0.0077 15.9 6.9 0.0084 15.8 6.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) Wzy_C PF04932.15 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_2 - 0.24 11.0 2.8 0.26 10.9 2.8 1.2 1 0 0 1 1 1 0 O-Antigen ligase DUF3810 PF12725.7 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_2 - 1.4 8.2 6.5 1.4 8.2 6.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Herpes_LMP1 PF05297.11 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_2 - 6.5 5.9 12.2 6.6 5.8 12.2 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF2087 PF09860.9 NODE_67260_length_236_cov_7.179104_g59319_i0reverse_frame_3 - 0.061 13.5 0.2 0.092 12.9 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) DUF2098 PF09871.9 NODE_67259_length_236_cov_21.248756_g59318_i0forward_frame_2 - 0.09 13.1 0.1 0.12 12.7 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) NurA PF09376.10 NODE_67258_length_236_cov_26.900498_g59317_i0reverse_frame_3 - 0.0079 15.9 0.1 0.0087 15.8 0.1 1.0 1 0 0 1 1 1 1 NurA domain UPF0542 PF15086.6 NODE_67258_length_236_cov_26.900498_g59317_i0reverse_frame_3 - 0.071 13.0 2.1 0.086 12.8 1.6 1.4 1 1 0 1 1 1 0 Uncharacterised protein family UPF0542 Adeno_VII PF03228.14 NODE_67258_length_236_cov_26.900498_g59317_i0reverse_frame_2 - 0.078 13.6 0.2 0.088 13.4 0.2 1.1 1 0 0 1 1 1 0 Adenoviral core protein VII Hormone_2 PF00123.20 NODE_67253_length_236_cov_37.353234_g59312_i0reverse_frame_2 - 0.16 11.9 0.9 14 5.7 0.0 2.9 3 0 0 3 3 3 0 Peptide hormone MPS2 PF17060.5 NODE_67252_length_236_cov_37.910448_g59311_i0forward_frame_3 - 0.002 17.5 0.2 0.0021 17.4 0.2 1.0 1 0 0 1 1 1 1 Monopolar spindle protein 2 SlyX PF04102.12 NODE_67252_length_236_cov_37.910448_g59311_i0forward_frame_3 - 0.0048 17.5 0.5 0.0062 17.1 0.5 1.1 1 0 0 1 1 1 1 SlyX Gal_Lectin PF02140.18 NODE_67252_length_236_cov_37.910448_g59311_i0forward_frame_2 - 0.087 13.3 0.8 0.11 12.9 0.8 1.1 1 0 0 1 1 1 0 Galactose binding lectin domain SAUGI PF06106.11 NODE_67250_length_236_cov_40.716418_g59309_i0forward_frame_3 - 0.12 12.9 0.0 0.2 12.2 0.0 1.4 1 0 0 1 1 1 0 S. aureus uracil DNA glycosylase inhibitor Arm-DNA-bind_5 PF17293.2 NODE_67245_length_236_cov_48.557214_g59304_i0forward_frame_2 - 0.037 14.5 2.1 0.044 14.2 2.1 1.2 1 0 0 1 1 1 0 Arm DNA-binding domain Telomerase_RBD PF12009.8 NODE_67233_length_236_cov_60.855721_g59292_i0forward_frame_2 - 0.065 13.3 0.1 0.074 13.2 0.1 1.1 1 0 0 1 1 1 0 Telomerase ribonucleoprotein complex - RNA binding domain DUF4492 PF14899.6 NODE_67229_length_236_cov_67.855721_g59288_i0reverse_frame_2 - 0.0022 17.9 5.1 0.0028 17.5 5.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4492) Glyco_hydro_59M PF17387.2 NODE_67228_length_236_cov_69.815920_g59287_i0reverse_frame_2 - 0.038 14.1 0.1 0.042 14.0 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 central domain KAR9 PF08580.10 NODE_67220_length_236_cov_109.756219_g59279_i0reverse_frame_3 - 0.12 10.9 0.0 0.13 10.8 0.0 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 P53_C PF11619.8 NODE_67216_length_236_cov_131.885572_g59275_i0reverse_frame_3 - 0.044 13.8 0.1 0.059 13.4 0.1 1.4 1 1 0 1 1 1 0 Transcription factor P53 - C terminal domain DUF4466 PF14725.6 NODE_67216_length_236_cov_131.885572_g59275_i0reverse_frame_3 - 0.071 12.6 0.1 0.08 12.4 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4466) SIC PF03482.13 NODE_67213_length_236_cov_181.407960_g59272_i0reverse_frame_3 - 0.29 11.3 1.0 0.56 10.4 0.1 1.8 2 0 0 2 2 2 0 sic protein repeat TSGP1 PF07771.11 NODE_67208_length_236_cov_318.895522_g59267_i0reverse_frame_3 - 0.12 12.6 4.1 0.14 12.3 4.1 1.2 1 0 0 1 1 1 0 Tick salivary peptide group 1 Med19 PF10278.9 NODE_67208_length_236_cov_318.895522_g59267_i0reverse_frame_3 - 0.25 11.3 10.6 0.3 11.0 10.6 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 KASH PF10541.9 NODE_67206_length_236_cov_328.915423_g59265_i0forward_frame_2 - 0.016 15.5 2.7 0.023 15.0 2.7 1.2 1 0 0 1 1 1 0 Nuclear envelope localisation domain PP1 PF07430.11 NODE_67202_length_236_cov_3592.800995_g59261_i0reverse_frame_2 - 0.096 12.7 1.3 0.12 12.4 1.3 1.2 1 0 0 1 1 1 0 Phloem filament protein PP1 cystatin-like domain PDDEXK_6 PF04720.12 NODE_67200_length_237_cov_0.787129_g59259_i0reverse_frame_3 - 0.1 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function YMF19 PF02326.15 NODE_67196_length_237_cov_0.900990_g59255_i0reverse_frame_2 - 0.099 13.4 0.3 0.14 13.0 0.3 1.3 1 0 0 1 1 1 0 Plant ATP synthase F0 EBA-175_VI PF11556.8 NODE_67195_length_237_cov_0.905941_g59254_i0reverse_frame_2 - 0.071 13.4 0.1 0.085 13.2 0.1 1.2 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 EB1 PF03271.17 NODE_67189_length_237_cov_1.000000_g59248_i0reverse_frame_3 - 0.15 12.3 0.1 0.22 11.8 0.1 1.3 1 0 0 1 1 1 0 EB1-like C-terminal motif OGFr_III PF04680.13 NODE_67187_length_237_cov_1.049505_g59246_i0forward_frame_3 - 0.11 13.1 1.8 5.7 7.7 0.6 2.6 2 0 0 2 2 2 0 Opioid growth factor receptor repeat LRV PF01816.17 NODE_67187_length_237_cov_1.049505_g59246_i0forward_frame_2 - 0.071 13.5 2.9 0.85 10.1 0.9 2.4 2 0 0 2 2 2 0 Leucine rich repeat variant HTH_Tnp_Tc3_2 PF01498.18 NODE_67181_length_237_cov_1.113861_g59240_i0reverse_frame_2 - 0.063 13.5 0.0 0.075 13.3 0.0 1.1 1 0 0 1 1 1 0 Transposase DUF2681 PF10883.8 NODE_67178_length_237_cov_1.183168_g59237_i0forward_frame_3 - 3.1 8.3 13.0 3.7 8.0 13.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) Med19 PF10278.9 NODE_67178_length_237_cov_1.183168_g59237_i0forward_frame_3 - 4.6 7.1 13.7 4.8 7.1 13.7 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF4820 PF16091.5 NODE_67178_length_237_cov_1.183168_g59237_i0forward_frame_2 - 0.39 10.1 5.0 0.42 10.0 5.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Auts2 PF15336.6 NODE_67178_length_237_cov_1.183168_g59237_i0forward_frame_2 - 3.8 7.6 12.7 4.1 7.5 12.7 1.1 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein PX PF00787.24 NODE_67177_length_237_cov_1.183168_g59236_i0forward_frame_2 - 6e-13 48.8 0.2 6.8e-13 48.6 0.2 1.0 1 0 0 1 1 1 1 PX domain DUF4094 PF13334.6 NODE_67176_length_237_cov_1.183168_g59235_i0reverse_frame_2 - 0.041 14.3 0.1 0.05 14.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) MamL-1 PF09596.10 NODE_67172_length_237_cov_1.188119_g59231_i0reverse_frame_3 - 0.066 13.5 0.2 0.082 13.2 0.2 1.2 1 0 0 1 1 1 0 MamL-1 domain BRD4_CDT PF17105.5 NODE_67171_length_237_cov_1.188119_g59230_i0reverse_frame_2 - 3.3 7.4 11.1 17 5.1 0.1 2.4 1 1 1 2 2 2 0 C-terminal domain of bromodomain protein 4 Polysacc_syn_2C PF08485.10 NODE_67169_length_237_cov_1.188119_g59228_i0reverse_frame_3 - 0.43 10.3 3.7 0.48 10.2 2.3 1.7 1 1 1 2 2 2 0 Polysaccharide biosynthesis protein C-terminal DNA_photolyase PF00875.18 NODE_67167_length_237_cov_1.202970_g59226_i0forward_frame_2 - 1.8e-05 24.8 0.1 2.4e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 DNA photolyase Ocular_alb PF02101.15 NODE_67166_length_237_cov_1.212871_g59225_i0reverse_frame_2 - 0.062 12.2 0.3 0.065 12.1 0.3 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein Lustrin_cystein PF14625.6 NODE_67165_length_237_cov_1.222772_g59224_i0forward_frame_2 - 0.14 12.5 21.8 0.31 11.5 3.3 3.4 1 1 2 3 3 3 0 Lustrin, cysteine-rich repeated domain Opy2 PF09463.10 NODE_67165_length_237_cov_1.222772_g59224_i0forward_frame_2 - 0.21 12.0 12.7 0.34 11.2 1.5 3.5 2 2 1 3 3 3 0 Opy2 protein Inhibitor_I36 PF03995.13 NODE_67165_length_237_cov_1.222772_g59224_i0forward_frame_2 - 1 9.3 10.2 4.1 7.4 0.5 3.3 3 0 0 3 3 3 0 Peptidase inhibitor family I36 Dickkopf_N PF04706.12 NODE_67165_length_237_cov_1.222772_g59224_i0forward_frame_2 - 2.6 8.6 10.0 1.1e+03 0.1 10.0 3.4 1 1 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region DUF4570 PF15134.6 NODE_67149_length_237_cov_1.425743_g59208_i0reverse_frame_3 - 0.072 13.1 0.0 0.077 13.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4570) MAP1B_neuraxin PF00414.17 NODE_67149_length_237_cov_1.425743_g59208_i0reverse_frame_3 - 0.13 11.9 0.5 0.24 11.0 0.5 1.5 1 0 0 1 1 1 0 Neuraxin and MAP1B repeat Antimicrobial23 PF16048.5 NODE_67147_length_237_cov_1.440594_g59206_i0reverse_frame_3 - 0.0079 15.8 0.5 0.015 15.0 0.5 1.4 1 0 0 1 1 1 1 Frog antimicrobial peptide ZapD PF07072.11 NODE_67145_length_237_cov_1.465347_g59204_i0forward_frame_2 - 0.074 12.8 0.1 0.091 12.5 0.1 1.1 1 0 0 1 1 1 0 Cell division protein PX PF00787.24 NODE_67138_length_237_cov_1.544554_g59197_i0reverse_frame_2 - 4.4e-15 55.6 0.3 4.5e-15 55.6 0.3 1.0 1 0 0 1 1 1 1 PX domain Zincin_2 PF10103.9 NODE_67138_length_237_cov_1.544554_g59197_i0reverse_frame_2 - 0.036 13.3 0.0 0.038 13.3 0.0 1.1 1 0 0 1 1 1 0 Zincin-like metallopeptidase PriCT_1 PF08708.11 NODE_67135_length_237_cov_1.549505_g59194_i0forward_frame_3 - 0.041 13.6 0.0 0.66 9.7 0.0 2.0 2 0 0 2 2 2 0 Primase C terminal 1 (PriCT-1) LRR_12 PF18837.1 NODE_67134_length_237_cov_1.569307_g59193_i0reverse_frame_2 - 0.033 13.8 0.4 0.21 11.3 0.2 2.0 1 1 1 2 2 2 0 Leucine-rich repeat DUF2071 PF09844.9 NODE_67132_length_237_cov_1.584158_g59191_i0reverse_frame_3 - 0.014 15.1 0.2 0.014 15.0 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (COG2071) Tail_spike_N PF18668.1 NODE_67132_length_237_cov_1.584158_g59191_i0reverse_frame_2 - 0.061 13.2 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain VirB3 PF05101.13 NODE_67130_length_237_cov_1.608911_g59189_i0reverse_frame_3 - 0.21 11.8 3.2 0.53 10.5 3.2 1.7 1 1 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF1010 PF06231.11 NODE_67129_length_237_cov_1.613861_g59188_i0forward_frame_3 - 0.0044 17.5 4.2 0.0059 17.1 3.6 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF1010) Muraidase PF11860.8 NODE_67128_length_237_cov_1.633663_g59187_i0forward_frame_3 - 0.074 13.3 0.3 0.092 13.0 0.3 1.1 1 0 0 1 1 1 0 N-acetylmuramidase RRM_1 PF00076.22 NODE_67128_length_237_cov_1.633663_g59187_i0forward_frame_2 - 0.008 16.0 0.0 0.015 15.1 0.0 1.7 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HU-DNA_bdg PF14848.6 NODE_67128_length_237_cov_1.633663_g59187_i0forward_frame_2 - 0.093 12.7 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 DNA-binding domain DUF3928 PF13065.6 NODE_67128_length_237_cov_1.633663_g59187_i0forward_frame_2 - 0.11 13.2 0.0 0.13 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3928) MDFI PF15316.6 NODE_67127_length_237_cov_1.663366_g59186_i0reverse_frame_3 - 0.0056 16.8 0.9 0.0069 16.5 0.9 1.1 1 0 0 1 1 1 1 MyoD family inhibitor VIT PF08487.10 NODE_67126_length_237_cov_1.693069_g59185_i0forward_frame_2 - 0.0035 17.5 0.2 0.0046 17.2 0.2 1.2 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain DUF4428 PF14471.6 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 0.0003 20.7 1.9 0.00043 20.1 1.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) zf_UBZ PF18439.1 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 0.0086 15.6 0.9 0.0086 15.6 0.9 2.0 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger zf-C2H2 PF00096.26 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 0.016 15.6 0.4 0.031 14.7 0.4 1.5 1 0 0 1 1 1 0 Zinc finger, C2H2 type NCD3G PF07562.14 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 0.2 11.6 6.1 0.29 11.1 6.0 1.4 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR DUF2116 PF09889.9 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 4.8 7.2 6.2 23 5.0 6.2 1.9 1 1 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Exo_endo_phos_2 PF14529.6 NODE_67123_length_237_cov_1.732673_g59182_i0reverse_frame_2 - 0.043 13.7 0.0 0.043 13.6 0.0 1.2 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase NPM1-C PF16276.5 NODE_67121_length_237_cov_1.757426_g59180_i0forward_frame_3 - 0.035 14.1 0.4 0.046 13.7 0.4 1.2 1 0 0 1 1 1 0 Nucleophosmin C-terminal domain rve PF00665.26 NODE_67120_length_237_cov_1.762376_g59179_i0reverse_frame_3 - 0.068 13.4 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Integrase core domain Pox_EPC_I2-L1 PF12575.8 NODE_67119_length_237_cov_1.772277_g59178_i0reverse_frame_3 - 0.057 13.6 0.8 0.073 13.3 0.5 1.4 1 1 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 DUF3798 PF12683.7 NODE_67115_length_237_cov_1.797030_g59174_i0reverse_frame_2 - 0.13 11.7 0.0 0.14 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3798) Perm-CXXC PF15629.6 NODE_67113_length_237_cov_1.826733_g59172_i0reverse_frame_2 - 1.6 9.0 8.0 0.35 11.2 4.2 1.8 2 0 0 2 2 2 0 Permuted single zf-CXXC unit NAD_synthase PF02540.17 NODE_67112_length_237_cov_1.851485_g59171_i0forward_frame_3 - 0.13 11.4 0.6 0.14 11.2 0.6 1.2 1 0 0 1 1 1 0 NAD synthase P53_tetramer PF07710.11 NODE_67111_length_237_cov_1.876238_g59170_i0reverse_frame_3 - 0.13 11.6 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 P53 tetramerisation motif COX14 PF14880.6 NODE_67111_length_237_cov_1.876238_g59170_i0reverse_frame_3 - 0.16 11.8 0.1 0.16 11.8 0.1 2.0 2 0 0 2 2 2 0 Cytochrome oxidase c assembly Glyco_hydro_85 PF03644.13 NODE_67111_length_237_cov_1.876238_g59170_i0reverse_frame_2 - 0.042 13.3 0.1 0.042 13.3 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 85 MerR-DNA-bind PF09278.11 NODE_67107_length_237_cov_1.915842_g59166_i0forward_frame_2 - 0.15 12.6 0.0 0.22 12.1 0.0 1.3 1 0 0 1 1 1 0 MerR, DNA binding Lamprin PF06403.11 NODE_67106_length_237_cov_1.940594_g59165_i0reverse_frame_3 - 0.73 9.8 5.4 0.89 9.5 5.4 1.3 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_67106_length_237_cov_1.940594_g59165_i0reverse_frame_2 - 0.00054 19.9 8.3 0.00099 19.1 8.3 1.5 1 1 0 1 1 1 1 Lamprin Chorion_1 PF01723.16 NODE_67106_length_237_cov_1.940594_g59165_i0reverse_frame_2 - 0.026 14.5 2.1 0.033 14.2 2.1 1.2 1 0 0 1 1 1 0 Chorion protein DUF4467 PF14729.6 NODE_67104_length_237_cov_1.965347_g59163_i0reverse_frame_2 - 0.12 12.7 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function with cystatin-like fold (DUF4467) HCV_env PF01539.17 NODE_67103_length_237_cov_1.965347_g59162_i0forward_frame_2 - 0.14 11.8 0.1 0.15 11.7 0.1 1.2 1 0 0 1 1 1 0 Hepatitis C virus envelope glycoprotein E1 DUF3112 PF11309.8 NODE_67100_length_237_cov_2.054455_g59159_i0reverse_frame_2 - 0.0063 16.0 1.1 0.0065 15.9 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3112) H_kinase_N PF12282.8 NODE_67100_length_237_cov_2.054455_g59159_i0reverse_frame_2 - 0.098 12.6 0.8 0.12 12.3 0.8 1.2 1 0 0 1 1 1 0 Signal transduction histidine kinase Cu PF17563.2 NODE_67099_length_237_cov_2.059406_g59158_i0reverse_frame_3 - 0.077 13.2 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Cupiennin Wzz PF02706.15 NODE_67090_length_237_cov_2.153465_g59149_i0forward_frame_3 - 6.3e-05 23.2 0.7 9.8e-05 22.6 0.7 1.3 1 0 0 1 1 1 1 Chain length determinant protein IQ PF00612.27 NODE_67086_length_237_cov_2.504950_g59145_i0reverse_frame_3 - 0.027 14.2 0.1 0.07 13.0 0.1 1.7 1 0 0 1 1 1 0 IQ calmodulin-binding motif DUF5488 PF17590.2 NODE_67085_length_237_cov_2.534653_g59144_i0reverse_frame_3 - 0.01 15.5 0.2 0.012 15.3 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5488) SRTM1 PF15872.5 NODE_67077_length_237_cov_2.801980_g59136_i0forward_frame_3 - 0.013 15.6 0.5 0.015 15.4 0.5 1.2 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 TAXi_N PF14543.6 NODE_67076_length_237_cov_2.801980_g59135_i0reverse_frame_2 - 2.5e-05 24.6 0.0 2.6e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Asp PF00026.23 NODE_67076_length_237_cov_2.801980_g59135_i0reverse_frame_2 - 0.00015 21.3 0.0 0.00017 21.1 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Beta_helix PF13229.6 NODE_67075_length_237_cov_2.836634_g59134_i0reverse_frame_3 - 0.016 15.0 0.1 0.018 14.9 0.1 1.0 1 0 0 1 1 1 0 Right handed beta helix region V_ATPase_I PF01496.19 NODE_67073_length_237_cov_3.029703_g59132_i0reverse_frame_2 - 4.5 5.1 10.6 4.8 5.0 10.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DHHC PF01529.20 NODE_67070_length_237_cov_3.306931_g59129_i0reverse_frame_2 - 3.4e-20 72.5 9.2 3.7e-20 72.4 9.2 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase Spt4 PF06093.13 NODE_67070_length_237_cov_3.306931_g59129_i0reverse_frame_2 - 0.078 13.1 1.0 0.095 12.8 1.0 1.2 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger P68HR PF08061.11 NODE_67063_length_237_cov_4.846535_g59122_i0forward_frame_2 - 0.17 12.0 0.7 0.31 11.2 0.7 1.4 1 0 0 1 1 1 0 P68HR (NUC004) repeat TAFII55_N PF04658.13 NODE_67061_length_237_cov_17.148515_g59120_i0forward_frame_2 - 0.029 14.1 0.1 0.035 13.8 0.1 1.1 1 0 0 1 1 1 0 TAFII55 protein conserved region NAD_binding_1 PF00175.21 NODE_67058_length_237_cov_38.292079_g59117_i0reverse_frame_3 - 7.9e-05 23.3 0.0 0.0001 22.9 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DUF1195 PF06708.11 NODE_67057_length_237_cov_39.861386_g59116_i0reverse_frame_3 - 0.18 11.5 0.1 0.21 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1195) RNA_polI_A34 PF08208.11 NODE_67057_length_237_cov_39.861386_g59116_i0forward_frame_3 - 6.7 6.7 23.0 7.8 6.5 23.0 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 PS_Dcarbxylase PF02666.15 NODE_67056_length_237_cov_41.000000_g59115_i0forward_frame_2 - 6.3e-05 22.6 0.0 6.6e-05 22.5 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase Shadoo PF14999.6 NODE_67055_length_237_cov_41.599010_g59114_i0reverse_frame_2 - 0.0041 17.2 0.1 0.0048 17.0 0.1 1.1 1 0 0 1 1 1 1 Shadow of prion protein, neuroprotective Ribosomal_L35Ae PF01247.18 NODE_67054_length_237_cov_43.034653_g59113_i0reverse_frame_3 - 2.1e-19 69.4 0.3 3.1e-19 68.9 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L35Ae DUF2080 PF09853.9 NODE_67054_length_237_cov_43.034653_g59113_i0reverse_frame_3 - 0.049 13.4 0.1 0.096 12.5 0.1 1.5 1 0 0 1 1 1 0 Putative transposon-encoded protein (DUF2080) End3 PF12761.7 NODE_67053_length_237_cov_43.603960_g59112_i0reverse_frame_3 - 0.0024 18.1 0.0 0.0026 18.0 0.0 1.1 1 0 0 1 1 1 1 Actin cytoskeleton-regulatory complex protein END3 EF-hand_4 PF12763.7 NODE_67053_length_237_cov_43.603960_g59112_i0reverse_frame_3 - 0.041 13.8 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand Fanconi_A PF03511.14 NODE_67052_length_237_cov_43.717822_g59111_i0forward_frame_2 - 3.1 7.8 6.1 48 4.0 6.1 2.1 1 1 0 1 1 1 0 Fanconi anaemia group A protein Prok-RING_4 PF14447.6 NODE_67051_length_237_cov_45.282178_g59110_i0reverse_frame_3 - 0.015 15.2 2.0 0.021 14.7 2.0 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Bunya_G2 PF03563.13 NODE_67049_length_237_cov_46.297030_g59108_i0forward_frame_3 - 0.061 12.6 1.7 0.07 12.4 1.7 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 ATP-synt_8 PF00895.20 NODE_67046_length_237_cov_50.277228_g59105_i0forward_frame_2 - 1.4 9.4 4.3 1 9.9 2.5 1.6 1 1 1 2 2 2 0 ATP synthase protein 8 KAAG1 PF15354.6 NODE_67042_length_237_cov_56.762376_g59101_i0forward_frame_2 - 0.0039 17.7 1.1 0.0049 17.4 1.1 1.2 1 0 0 1 1 1 1 Kidney-associated antigen 1 DUF4834 PF16118.5 NODE_67039_length_237_cov_63.133663_g59098_i0forward_frame_2 - 0.28 12.2 1.3 0.27 12.2 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Peptidase_C16 PF01831.17 NODE_67038_length_237_cov_65.648515_g59097_i0reverse_frame_3 - 0.027 14.2 0.1 0.029 14.1 0.1 1.0 1 0 0 1 1 1 0 Peptidase C16 family Thionin PF00321.17 NODE_67037_length_237_cov_69.247525_g59096_i0reverse_frame_2 - 0.04 14.4 2.3 0.04 14.4 2.3 1.4 1 1 0 1 1 1 0 Plant thionin QueC PF06508.13 NODE_67037_length_237_cov_69.247525_g59096_i0forward_frame_2 - 0.023 14.2 0.1 0.026 14.0 0.1 1.1 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC KCNQ_channel PF03520.14 NODE_67036_length_237_cov_70.004950_g59095_i0forward_frame_3 - 0.021 14.7 0.8 0.023 14.6 0.8 1.1 1 0 0 1 1 1 0 KCNQ voltage-gated potassium channel Abhydrolase_6 PF12697.7 NODE_67032_length_237_cov_75.004950_g59091_i0forward_frame_3 - 0.00013 22.7 0.0 0.00014 22.5 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF2755 PF10954.8 NODE_67030_length_237_cov_77.851485_g59089_i0forward_frame_3 - 0.094 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2755) YMF19 PF02326.15 NODE_67030_length_237_cov_77.851485_g59089_i0forward_frame_2 - 0.056 14.2 0.0 0.058 14.2 0.0 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 DUF3678 PF12435.8 NODE_67018_length_237_cov_115.836634_g59077_i0forward_frame_3 - 0.062 12.7 1.8 0.12 11.8 1.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) Med13_N PF11597.8 NODE_67017_length_237_cov_124.425743_g59076_i0reverse_frame_3 - 0.042 13.2 0.1 0.044 13.2 0.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 13 N-terminal DUF4131 PF13567.6 NODE_67016_length_237_cov_134.306931_g59075_i0reverse_frame_3 - 0.022 14.4 0.0 0.025 14.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) TRAP-gamma PF07074.12 NODE_67016_length_237_cov_134.306931_g59075_i0reverse_frame_3 - 0.058 13.0 2.9 0.067 12.7 2.9 1.1 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Cadherin_tail PF15974.5 NODE_67016_length_237_cov_134.306931_g59075_i0forward_frame_3 - 0.0043 17.4 0.4 0.0045 17.3 0.4 1.2 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region YqfD PF06898.11 NODE_67014_length_237_cov_188.910891_g59073_i0reverse_frame_2 - 1.7 7.4 3.1 3.7 6.3 0.0 1.9 2 0 0 2 2 2 0 Putative stage IV sporulation protein YqfD DUF1691 PF07950.11 NODE_67014_length_237_cov_188.910891_g59073_i0forward_frame_2 - 0.049 14.4 0.0 0.055 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1691) SSXRD PF09514.10 NODE_67009_length_237_cov_252.727723_g59068_i0forward_frame_3 - 0.044 13.4 0.1 0.069 12.7 0.1 1.3 1 0 0 1 1 1 0 SSXRD motif SLC3A2_N PF16028.5 NODE_67008_length_237_cov_256.039604_g59067_i0forward_frame_2 - 0.085 12.4 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus TAFII55_N PF04658.13 NODE_67007_length_237_cov_256.059406_g59066_i0reverse_frame_2 - 0.025 14.3 0.1 0.025 14.3 0.1 1.1 1 0 0 1 1 1 0 TAFII55 protein conserved region zf-C2HC5 PF06221.13 NODE_67006_length_237_cov_437.039604_g59065_i0forward_frame_2 - 0.0077 16.2 0.9 3 7.9 0.2 2.1 1 1 1 2 2 2 2 Putative zinc finger motif, C2HC5-type TrbC PF04956.13 NODE_67001_length_237_cov_32943.935644_g59060_i0reverse_frame_2 - 0.078 13.2 4.0 0.094 12.9 4.0 1.1 1 0 0 1 1 1 0 TrbC/VIRB2 family Prok-E2_C PF14459.6 ORF99752 - 0.043 14.0 0.6 0.049 13.8 0.6 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family C IL32 PF15225.6 ORF98665 - 0.26 11.7 4.2 0.26 11.7 3.9 1.3 1 1 0 1 1 1 0 Interleukin 32 PPDK_N PF01326.19 ORF98608 - 0.045 13.0 0.0 0.049 12.9 0.0 1.0 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GPI2 PF06432.11 ORF98482 - 0.014 14.9 2.7 0.016 14.7 2.7 1.0 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase TMEM247 PF15444.6 ORF98482 - 0.37 10.8 5.8 0.42 10.6 5.8 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 DUF4133 PF13571.6 ORF98482 - 0.38 11.1 3.9 0.53 10.7 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) DUF4306 PF14154.6 ORF9836 - 0.042 14.0 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4306) RDV-p3 PF09231.10 ORF98342 - 0.075 10.7 1.7 0.083 10.6 1.7 1.0 1 0 0 1 1 1 0 Rice dwarf virus p3 CCDC117 PF15810.5 ORF98191 - 0.33 11.2 1.2 0.36 11.1 1.2 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 117 Rrn6 PF10214.9 ORF98191 - 0.67 8.4 9.0 0.64 8.4 9.0 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF2620 PF10941.8 ORF9803 - 0.25 11.5 1.0 0.27 11.4 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF2620 TEX19 PF15553.6 ORF97252 - 0.046 13.7 0.2 0.046 13.7 0.2 1.0 1 0 0 1 1 1 0 Testis-expressed protein 19 DUF5522 PF17653.1 ORF97222 - 4.3 7.4 8.0 0.44 10.5 2.2 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5522) SelK_SelG PF10961.8 ORF96372 - 3.2 8.4 4.3 4.4 8.0 4.3 1.4 1 1 0 1 1 1 0 Selenoprotein SelK_SelG Ank_2 PF12796.7 ORF95248 - 0.0023 18.5 0.0 0.0027 18.3 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF95248 - 0.01 16.3 0.0 0.1 13.2 0.0 2.3 2 1 1 3 3 3 0 Ankyrin repeat AstA PF04958.12 ORF94432 - 0.068 11.7 0.0 0.089 11.3 0.0 1.1 1 0 0 1 1 1 0 Arginine N-succinyltransferase beta subunit DSPc PF00782.20 ORF94052 - 1.4e-06 28.2 0.0 1.9e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain IMS_C PF11799.8 ORF93411 - 3.8e-12 47.0 0.0 4e-12 46.9 0.0 1.0 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain Pkinase PF00069.25 ORF92602 - 2.6e-07 30.3 0.1 2.8e-07 30.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92602 - 0.0072 15.6 0.0 0.0076 15.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Ribosomal_L20 PF00453.18 ORF92602 - 0.019 15.1 0.2 0.021 14.9 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein L20 DUF3231 PF11553.8 ORF92602 - 0.086 12.5 0.1 0.093 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3231) ThiC-associated PF13667.6 ORF91877 - 0.011 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 ThiC-associated domain NAM-associated PF14303.6 ORF91796 - 0.067 13.9 1.0 0.072 13.8 1.0 1.1 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain Leu_leader PF08054.11 ORF91329 - 0.55 9.9 4.0 0.31 10.7 1.9 1.6 2 0 0 2 2 2 0 Leucine operon leader peptide DUF2214 PF09980.9 ORF90801 - 0.25 11.1 5.9 0.27 11.1 5.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2214) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks311.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks311.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks311.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks311.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Phage_holin_2_1 PF04971.12 ORF9018 - 0.0086 16.1 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Bacteriophage P21 holin S Gypsy PF07253.11 ORF89598 - 0.009 14.6 0.2 0.011 14.4 0.2 1.1 1 0 0 1 1 1 1 Gypsy protein HSCB_C PF07743.13 ORF89031 - 0.0028 18.1 2.7 0.0041 17.6 2.4 1.5 1 1 0 1 1 1 1 HSCB C-terminal oligomerisation domain GIT_CC PF16559.5 ORF89031 - 0.026 14.4 0.5 0.044 13.7 0.5 1.3 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor PLC-beta_C PF08703.10 ORF89031 - 0.1 12.6 6.0 0.44 10.5 1.2 2.0 1 1 1 2 2 2 0 PLC-beta C terminal SAM_1 PF00536.30 ORF89031 - 0.11 13.0 0.2 0.14 12.7 0.2 1.2 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Phage_Mu_Gam PF07352.12 ORF89031 - 0.12 12.3 3.5 0.27 11.1 3.3 1.7 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein XhlA PF10779.9 ORF89031 - 0.22 11.7 6.6 0.26 11.5 4.4 1.8 1 1 1 2 2 2 0 Haemolysin XhlA TMPIT PF07851.13 ORF89031 - 0.24 10.6 0.8 0.23 10.7 0.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein Wx5_PLAF3D7 PF09688.10 ORF88901 - 0.0061 16.6 1.0 0.007 16.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (Wx5_PLAF3D7) UPF0102 PF02021.17 ORF8867 - 3.3e-12 46.4 0.1 3.7e-12 46.3 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 BLOC1_2 PF10046.9 ORF88320 - 0.017 15.4 0.1 0.023 15.0 0.1 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 MIP PF00230.20 ORF88197 - 0.0022 17.8 0.5 0.0039 16.9 0.5 1.4 1 1 0 1 1 1 1 Major intrinsic protein TraT PF05818.12 ORF88006 - 0.15 11.7 0.3 0.16 11.7 0.3 1.0 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein RPAP1_N PF08621.10 ORF87925 - 0.0014 18.4 0.0 0.0022 17.7 0.0 1.3 1 0 0 1 1 1 1 RPAP1-like, N-terminal Tax PF02959.16 ORF87396 - 0.042 13.3 0.2 0.044 13.2 0.2 1.0 1 0 0 1 1 1 0 HTLV Tax AMP-binding PF00501.28 ORF87224 - 0.064 11.8 0.0 0.071 11.7 0.0 1.0 1 0 0 1 1 1 0 AMP-binding enzyme UL17 PF17640.2 ORF87043 - 0.12 12.4 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized UL17 LRAT PF04970.13 ORF86744 - 0.0051 17.1 0.1 0.0053 17.1 0.1 1.1 1 0 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 ORF86744 - 0.038 13.8 0.2 0.039 13.8 0.2 1.3 1 1 0 1 1 1 0 PPPDE putative peptidase domain MORN PF02493.20 ORF86604 - 3.1e-15 55.0 11.5 8.4e-05 22.2 1.4 3.3 3 0 0 3 3 3 3 MORN repeat CTK3_C PF12350.8 ORF86604 - 0.079 13.1 0.2 0.099 12.8 0.2 1.1 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 C-terminus NDUFA12 PF05071.16 ORF85985 - 0.14 13.0 0.0 0.16 12.9 0.0 1.1 1 0 0 1 1 1 0 NADH ubiquinone oxidoreductase subunit NDUFA12 baeRF_family5 PF18846.1 ORF85895 - 0.014 15.6 0.5 0.015 15.5 0.5 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 5 DUF4710 PF15828.5 ORF85895 - 0.65 10.1 5.9 0.61 10.2 5.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4710) CTP_transf_3 PF02348.19 ORF85742 - 0.014 15.4 0.4 0.016 15.1 0.4 1.0 1 0 0 1 1 1 0 Cytidylyltransferase RAMA PF18755.1 ORF85643 - 0.13 12.7 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Restriction Enzyme Adenine Methylase Associated CheR_N PF03705.15 ORF85300 - 0.31 10.8 4.9 0.48 10.2 4.9 1.3 1 0 0 1 1 1 0 CheR methyltransferase, all-alpha domain SP24 PF16504.5 ORF85020 - 0.11 12.5 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative virion membrane protein of plant and insect virus DUF3094 PF11293.8 ORF84554 - 0.25 11.1 3.8 0.41 10.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) CrgA PF06781.12 ORF84554 - 4.6 7.4 6.3 1.3e+02 2.7 6.5 2.0 1 1 0 1 1 1 0 Cell division protein CrgA CTP_transf_3 PF02348.19 ORF84302 - 0.014 15.4 0.4 0.016 15.1 0.4 1.0 1 0 0 1 1 1 0 Cytidylyltransferase ACTH_domain PF00976.18 ORF83986 - 0.1 12.6 0.8 0.1 12.6 0.8 2.1 2 0 0 2 2 2 0 Corticotropin ACTH domain SLATT_6 PF18169.1 ORF83144 - 0.072 12.7 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 Pkinase PF00069.25 ORF83081 - 2.3e-11 43.5 0.1 2.5e-11 43.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83081 - 1.5e-07 31.0 0.1 1.6e-07 30.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2214 PF09980.9 ORF82906 - 0.25 11.1 5.9 0.27 11.1 5.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2214) DUF3039 PF11238.8 ORF819 - 0.11 12.2 0.4 0.19 11.5 0.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) Kinesin PF00225.23 ORF81742 - 7.7e-05 21.8 0.1 8.4e-05 21.6 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF81742 - 0.00058 19.8 0.1 0.00074 19.5 0.1 1.0 1 0 0 1 1 1 1 Microtubule binding zn-ribbon_14 PF16503.5 ORF81457 - 0.044 13.3 0.8 0.073 12.6 0.8 1.3 1 0 0 1 1 1 0 Zinc-ribbon PIG-F PF06699.11 ORF81445 - 0.051 13.7 0.2 0.057 13.6 0.2 1.0 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F Alpha_adaptin_C PF02296.16 ORF81445 - 0.13 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain Casc1_N PF15927.5 ORF81145 - 4.8e-09 36.2 0.2 6e-09 35.9 0.2 1.0 1 0 0 1 1 1 1 Cancer susceptibility candidate 1 N-terminus IL6Ra-bind PF09240.10 ORF81145 - 0.019 15.4 0.3 0.03 14.7 0.2 1.4 1 1 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding AAA_lid_2 PF17863.1 ORF80945 - 0.1 12.4 0.1 0.18 11.7 0.1 1.4 1 0 0 1 1 1 0 AAA lid domain DUF1505 PF07403.11 ORF8091 - 0.11 12.7 0.1 0.14 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) LPD5 PF18799.1 ORF8091 - 0.42 11.0 4.6 3.4 8.1 1.0 2.1 2 0 0 2 2 2 0 Large polyvalent protein-associated domain 5 CNOT11 PF10155.9 ORF80648 - 0.081 13.1 0.0 0.086 13.0 0.0 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 DUF4400 PF14348.6 ORF80415 - 0.24 10.9 1.5 0.36 10.3 1.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) Ribosomal_L28 PF00830.19 ORF80310 - 1.8e-25 88.9 1.7 2.1e-25 88.7 1.7 1.1 1 0 0 1 1 1 1 Ribosomal L28 family Chromo PF00385.24 ORF803 - 0.039 13.9 0.1 0.063 13.2 0.1 1.4 1 0 0 1 1 1 0 Chromo (CHRromatin Organisation MOdifier) domain CTP_transf_3 PF02348.19 ORF79843 - 0.014 15.4 0.4 0.016 15.1 0.4 1.0 1 0 0 1 1 1 0 Cytidylyltransferase CNOT11 PF10155.9 ORF79525 - 0.081 13.1 0.0 0.086 13.0 0.0 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 zf_CCCH_4 PF18345.1 ORF79445 - 1.2e-07 31.5 0.8 2.3e-07 30.6 0.8 1.5 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 ORF79445 - 2.8e-05 24.8 1.1 3.2e-05 24.6 1.1 1.1 1 0 0 1 1 1 1 Torus domain zf-CCCH_4 PF18044.1 ORF79445 - 7.5e-05 22.4 0.2 0.00013 21.7 0.2 1.4 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF79445 - 0.00029 21.0 1.3 0.00043 20.5 1.3 1.4 1 0 0 1 1 1 1 Zinc-finger containing family zf-CCCH PF00642.24 ORF79445 - 0.0011 18.8 0.6 0.078 12.9 0.1 2.2 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF79445 - 0.041 14.4 0.7 0.041 14.4 0.7 1.8 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger DLH PF01738.18 ORF79093 - 0.013 15.0 0.0 0.014 15.0 0.0 1.0 1 0 0 1 1 1 0 Dienelactone hydrolase family Hydrolase_4 PF12146.8 ORF79093 - 0.091 12.0 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 TBP PF00352.21 ORF7892 - 7.4e-21 73.9 0.0 8.2e-21 73.8 0.0 1.0 1 0 0 1 1 1 1 Transcription factor TFIID (or TATA-binding protein, TBP) SUA5 PF03481.13 ORF7892 - 0.018 15.6 0.0 0.018 15.6 0.0 1.1 1 0 0 1 1 1 0 Putative GTP-binding controlling metal-binding DUF5525 PF17663.1 ORF7858 - 0.036 12.2 0.0 0.041 12.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) DUF3923 PF13061.6 ORF77377 - 0.024 14.7 0.2 0.034 14.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3923) Leu_Phe_trans PF03588.14 ORF77186 - 0.056 13.0 1.6 0.066 12.7 1.6 1.0 1 0 0 1 1 1 0 Leucyl/phenylalanyl-tRNA protein transferase AAA_14 PF13173.6 ORF77186 - 0.07 13.2 0.4 0.088 12.9 0.4 1.5 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF76662 - 0.025 15.0 0.5 0.027 14.8 0.5 1.1 1 0 0 1 1 1 0 RNA helicase ATG16 PF08614.11 ORF76639 - 0.0019 18.5 5.4 0.002 18.4 5.4 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) KxDL PF10241.9 ORF76639 - 0.0022 18.2 3.4 0.0028 17.9 3.4 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein DHOase PF12890.7 ORF76639 - 0.1 12.5 0.2 0.12 12.3 0.2 1.2 1 0 0 1 1 1 0 Dihydro-orotase-like SlyX PF04102.12 ORF76639 - 0.22 12.2 2.3 0.35 11.5 2.3 1.4 1 1 0 1 1 1 0 SlyX DUF1664 PF07889.12 ORF76639 - 0.43 10.6 5.3 0.46 10.5 5.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2312 PF10073.9 ORF76639 - 0.85 9.3 7.1 1.8 8.2 3.9 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Saf_2TM PF18303.1 ORF76599 - 0.87 9.2 3.8 0.94 9.1 3.8 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain DUF3487 PF11990.8 ORF76599 - 1.3 8.9 5.3 1.7 8.5 5.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) FtsX PF02687.21 ORF76599 - 1.6 9.3 8.5 2.3 8.8 8.5 1.3 1 0 0 1 1 1 0 FtsX-like permease family DUF4083 PF13314.6 ORF76599 - 2.4 8.2 7.5 1.5 8.8 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) Baculo_LEF-3 PF05847.11 ORF76065 - 0.016 14.4 0.2 0.016 14.4 0.2 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus late expression factor 3 (LEF-3) YhdX PF17444.2 ORF76034 - 0.17 11.8 0.2 0.25 11.2 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized YhdX-like Ig_C17orf99 PF17736.1 ORF74995 - 0.13 12.4 0.5 0.13 12.4 0.5 1.8 1 1 1 2 2 2 0 C17orf99 Ig domain Kinin PF08260.11 ORF74615 - 0.68 10.6 4.6 1.9 9.3 4.6 1.8 1 0 0 1 1 1 0 Insect kinin peptide CNOT11 PF10155.9 ORF74250 - 0.081 13.1 0.0 0.086 13.0 0.0 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 Kelch_5 PF13854.6 ORF74185 - 0.13 12.3 1.4 0.18 11.8 0.2 1.9 2 1 1 3 3 3 0 Kelch motif DUF5110 PF17137.4 ORF73692 - 0.14 12.4 0.2 0.21 11.9 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) INSC_LBD PF16748.5 ORF72931 - 0.033 13.6 0.0 0.052 13.0 0.0 1.3 1 0 0 1 1 1 0 Inscuteable LGN-binding domain DUF1768 PF08719.11 ORF72433 - 4.1e-13 49.9 0.0 4.2e-13 49.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) baeRF_family5 PF18846.1 ORF71614 - 0.014 15.6 0.5 0.015 15.5 0.5 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 5 DUF4710 PF15828.5 ORF71614 - 0.65 10.1 5.9 0.61 10.2 5.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4710) Antimicrobial21 PF14861.6 ORF71112 - 0.038 13.7 2.6 0.038 13.7 2.6 1.8 2 0 0 2 2 2 0 Plant antimicrobial peptide TMEM107 PF14995.6 ORF70635 - 8.2e-10 39.2 4.4 9.2e-10 39.0 4.4 1.0 1 0 0 1 1 1 1 Transmembrane protein RNA_pol_Rpb2_5 PF04567.17 ORF69823 - 0.036 14.6 0.2 0.047 14.2 0.2 1.3 1 1 0 1 1 1 0 RNA polymerase Rpb2, domain 5 DUF3675 PF12428.8 ORF69194 - 0.064 13.8 0.0 0.066 13.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) OHA PF14418.6 ORF68952 - 0.0013 18.5 0.3 0.0048 16.7 0.0 1.9 2 1 0 2 2 2 1 OST-HTH Associated domain FliD_N PF02465.18 ORF68290 - 0.026 15.2 0.6 0.026 15.2 0.6 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus DUF2173 PF09941.9 ORF67689 - 0.076 13.3 0.0 0.096 13.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2173) Rhomboid_SP PF12595.8 ORF6762 - 0.074 12.4 0.5 0.081 12.3 0.5 1.1 1 0 0 1 1 1 0 Rhomboid serine protease Cyclin_C PF02984.19 ORF66080 - 0.0022 18.1 0.1 0.003 17.6 0.1 1.4 1 1 0 1 1 1 1 Cyclin, C-terminal domain DUF4779 PF16009.5 ORF65507 - 0.0062 16.6 5.5 0.0073 16.4 5.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4779) DUF2325 PF10087.9 ORF65507 - 0.091 12.9 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2325) DUF2250 PF10007.9 ORF65507 - 0.11 12.6 2.3 0.17 12.0 2.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF525 PF04379.14 ORF65370 - 0.036 14.3 0.4 0.052 13.8 0.4 1.2 1 0 0 1 1 1 0 ApaG domain Sugar_tr PF00083.24 ORF64710 - 1.7e-08 33.8 6.1 1.8e-08 33.7 6.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter NDUFA12 PF05071.16 ORF64456 - 0.14 13.0 0.0 0.16 12.9 0.0 1.1 1 0 0 1 1 1 0 NADH ubiquinone oxidoreductase subunit NDUFA12 OKR_DC_1_N PF03709.15 ORF64263 - 0.092 13.0 0.0 0.092 13.0 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain FHA PF00498.26 ORF63896 - 3.2e-11 43.4 0.2 4.2e-11 43.0 0.2 1.2 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF63896 - 5.7e-07 29.8 0.0 6.8e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain CBM_26 PF16824.5 ORF63896 - 0.13 12.4 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 C-terminal carbohydrate-binding module GCD14 PF08704.10 ORF63446 - 0.16 11.7 8.7 0.15 11.7 8.7 1.0 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Endonuc-BsobI PF09194.10 ORF63446 - 0.23 10.6 6.2 0.24 10.5 6.2 1.1 1 0 0 1 1 1 0 Restriction endonuclease BsobI UPF0114 PF03350.16 ORF63125 - 0.018 15.2 1.5 0.026 14.7 1.5 1.3 1 1 0 1 1 1 0 Uncharacterized protein family, UPF0114 Spec3 PF15795.5 ORF62769 - 4.9e-06 27.0 11.2 7e-06 26.5 11.2 1.4 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein Insulin PF00049.18 ORF61818 - 0.022 15.7 1.8 0.029 15.4 1.8 1.2 1 0 0 1 1 1 0 Insulin/IGF/Relaxin family Rxt3 PF08642.10 ORF61818 - 0.28 12.0 1.0 0.32 11.8 1.0 1.1 1 0 0 1 1 1 0 Histone deacetylation protein Rxt3 DDE_Tnp_IS66 PF03050.14 ORF61818 - 0.56 9.6 7.5 0.63 9.5 7.5 1.0 1 0 0 1 1 1 0 Transposase IS66 family DUF1682 PF07946.14 ORF61818 - 9.6 5.3 19.3 12 5.0 19.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) PMR5N PF14416.6 ORF61799 - 0.077 13.3 1.2 0.2 12.0 0.3 2.1 3 0 0 3 3 3 0 PMR5 N terminal Domain DUF2560 PF10834.8 ORF61540 - 0.028 14.6 0.0 0.033 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2560) FAM72 PF14976.6 ORF60795 - 0.11 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 FAM72 protein zf-C2H2_11 PF16622.5 ORF60340 - 0.0017 18.1 0.1 0.0034 17.1 0.1 1.6 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2_4 PF13894.6 ORF60340 - 0.0031 18.2 0.1 0.0031 18.2 0.1 2.2 3 0 0 3 3 3 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF60340 - 0.0044 17.4 0.1 0.0044 17.4 0.1 2.5 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF60340 - 0.34 11.4 0.1 0.34 11.4 0.1 2.7 3 0 0 3 3 3 0 Zinc-finger double domain SpoU_sub_bind PF08032.12 ORF60324 - 0.17 12.2 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 RNA 2'-O ribose methyltransferase substrate binding Pkinase PF00069.25 ORF60240 - 0.0064 15.9 0.2 0.044 13.2 0.2 1.9 1 1 0 1 1 1 1 Protein kinase domain DUF5326 PF17260.2 ORF59879 - 0.071 13.3 2.5 0.65 10.2 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5326) BIRC6 PF12356.8 ORF59510 - 0.13 11.7 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 DUF296 PF03479.15 ORF58099 - 0.074 13.4 0.0 0.091 13.1 0.0 1.2 1 1 0 1 1 1 0 Plants and Prokaryotes Conserved (PCC) domain DUF4283 PF14111.6 ORF57452 - 0.13 11.7 1.6 0.15 11.6 1.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) NAT PF04768.13 ORF57361 - 0.022 14.4 0.4 0.026 14.2 0.4 1.0 1 0 0 1 1 1 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase Bromodomain PF00439.25 ORF57361 - 0.047 13.8 0.4 0.058 13.5 0.4 1.2 1 0 0 1 1 1 0 Bromodomain Cryptochrome_C PF12546.8 ORF5726 - 0.051 14.2 0.2 0.062 13.9 0.2 1.1 1 0 0 1 1 1 0 Blue/Ultraviolet sensing protein C terminal DUF863 PF05904.11 ORF56952 - 0.22 9.9 1.4 0.23 9.9 1.4 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) DUF3799 PF12684.7 ORF56722 - 0.022 14.5 0.3 0.027 14.3 0.3 1.1 1 0 0 1 1 1 0 PDDEXK-like domain of unknown function (DUF3799) DUF2713 PF10897.8 ORF56409 - 8.1e-44 150.0 0.7 8.9e-44 149.9 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2713) DUF3721 PF12518.8 ORF56208 - 0.073 12.9 0.1 9.1 6.2 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function Aim21 PF11489.8 ORF56200 - 0.0086 15.0 1.3 0.0094 14.9 1.3 1.0 1 0 0 1 1 1 1 Altered inheritance of mitochondria protein 21 DUF5401 PF17380.2 ORF55745 - 0.15 10.2 0.0 0.15 10.1 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) NYD-SP28 PF14772.6 ORF55470 - 0.0038 17.2 2.0 0.005 16.9 2.0 1.3 1 0 0 1 1 1 1 Sperm tail IQ PF00612.27 ORF55470 - 0.035 13.9 2.1 0.035 13.9 2.1 1.8 2 0 0 2 2 2 0 IQ calmodulin-binding motif DZF PF07528.14 ORF55470 - 0.14 11.8 0.4 0.17 11.5 0.4 1.0 1 0 0 1 1 1 0 DZF domain Ank_4 PF13637.6 ORF5532 - 0.0054 17.3 0.0 0.0069 16.9 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Spond_N PF06468.13 ORF5382 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Spondin_N Colicin_im PF03857.13 ORF53306 - 0.062 13.3 0.1 0.065 13.2 0.1 1.1 1 0 0 1 1 1 0 Colicin immunity protein CBM_20 PF00686.19 ORF53296 - 1.3e-12 47.4 0.0 1.4e-12 47.3 0.0 1.0 1 0 0 1 1 1 1 Starch binding domain FAD-oxidase_C PF02913.19 ORF52737 - 2.6e-20 73.1 0.1 2.9e-20 73.0 0.1 1.0 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain Sugar_tr PF00083.24 ORF52600 - 2.4e-13 49.7 0.8 2.6e-13 49.6 0.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2389 PF09493.10 ORF52134 - 0.053 14.2 0.2 0.13 12.9 0.1 1.7 2 0 0 2 2 2 0 Tryptophan-rich protein (DUF2389) DUF2423 PF10338.9 ORF51856 - 0.17 12.1 0.1 0.26 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2423) zf-Tim10_DDP PF02953.15 ORF51419 - 0.16 11.6 6.2 0.032 13.9 2.7 1.6 2 1 0 2 2 2 0 Tim10/DDP family zinc finger Cyclin_C PF02984.19 ORF51297 - 0.0022 18.1 0.1 0.003 17.6 0.1 1.4 1 1 0 1 1 1 1 Cyclin, C-terminal domain BLOC1_2 PF10046.9 ORF51010 - 0.017 15.4 0.1 0.023 15.0 0.1 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF3980 PF13140.6 ORF50650 - 0.13 12.7 0.7 0.13 12.7 0.7 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3980) EphA2_TM PF14575.6 ORF5059 - 0.08 13.8 0.0 0.08 13.8 0.0 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ATP-synt_I PF03899.15 ORF49705 - 0.019 15.3 0.0 0.022 15.1 0.0 1.2 1 0 0 1 1 1 0 ATP synthase I chain Mlo PF03094.15 ORF49705 - 0.063 11.6 0.1 0.069 11.5 0.1 1.0 1 0 0 1 1 1 0 Mlo family FeoC PF09012.10 ORF49331 - 7.3e-13 48.4 0.4 8.6e-13 48.2 0.4 1.0 1 0 0 1 1 1 1 FeoC like transcriptional regulator TrmB PF01978.19 ORF49331 - 2.1e-06 27.5 0.0 2.8e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 ORF49331 - 0.04 13.5 0.0 0.061 12.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding FAM167 PF11652.8 ORF49331 - 0.043 14.3 0.0 0.046 14.2 0.0 1.1 1 0 0 1 1 1 0 FAM167 Fe_dep_repress PF01325.19 ORF49331 - 0.16 12.2 0.1 0.21 11.8 0.1 1.1 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF5511 PF17630.2 ORF49279 - 0.13 12.5 0.1 0.16 12.2 0.1 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5511) TEP1_N PF05386.11 ORF48659 - 0.097 12.3 0.5 0.097 12.3 0.5 1.9 3 0 0 3 3 3 0 TEP1 N-terminal domain Rep_1 PF01446.17 ORF48469 - 7.9 5.9 6.9 9.3 5.6 6.9 1.1 1 0 0 1 1 1 0 Replication protein Ndc1_Nup PF09531.10 ORF47541 - 0.72 8.5 3.9 0.74 8.4 3.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup zn-ribbon_14 PF16503.5 ORF47374 - 0.044 13.3 0.8 0.073 12.6 0.8 1.3 1 0 0 1 1 1 0 Zinc-ribbon GAIN_A PF18619.1 ORF47189 - 0.029 14.6 0.3 2.1 8.6 0.0 2.4 2 1 0 2 2 2 0 GPCR-Autoproteolysis-INducing (GAIN) subdomain A PPR_2 PF13041.6 ORF46389 - 6.7e-06 26.2 0.1 9.3e-06 25.8 0.1 1.3 1 0 0 1 1 1 1 PPR repeat family PPR_3 PF13812.6 ORF46389 - 0.0016 18.4 0.0 0.003 17.6 0.0 1.5 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 ORF46389 - 0.046 14.0 0.7 0.099 12.9 0.4 1.7 2 0 0 2 2 2 0 PPR repeat GCD14 PF08704.10 ORF4626 - 0.16 11.7 8.7 0.15 11.7 8.7 1.0 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Endonuc-BsobI PF09194.10 ORF4626 - 0.23 10.6 6.2 0.24 10.5 6.2 1.1 1 0 0 1 1 1 0 Restriction endonuclease BsobI NDUFA12 PF05071.16 ORF4590 - 0.14 13.0 0.0 0.16 12.9 0.0 1.1 1 0 0 1 1 1 0 NADH ubiquinone oxidoreductase subunit NDUFA12 DUF5463 PF17551.2 ORF4379 - 0.024 14.5 2.0 0.28 11.1 0.3 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5463) Pro_isomerase PF00160.21 ORF4372 - 1.1e-05 25.7 0.0 1.6e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VMA21 PF09446.10 ORF43533 - 1.3e-08 34.8 2.6 1.9e-08 34.3 2.6 1.2 1 0 0 1 1 1 1 VMA21-like domain DUF1129 PF06570.11 ORF43533 - 0.0049 16.4 2.8 0.0056 16.2 2.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) Ank_5 PF13857.6 ORF43019 - 6.9e-10 39.0 2.8 9.3e-06 25.8 0.5 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF43019 - 1.3e-09 38.5 0.1 1.5e-09 38.3 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF43019 - 7.4e-07 29.3 1.5 0.015 15.7 0.0 2.4 2 1 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF43019 - 8e-06 26.3 0.1 1.2e-05 25.7 0.1 1.4 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF43019 - 0.00013 22.1 0.0 0.84 10.4 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat Auxin_inducible PF02519.14 ORF4291 - 0.1 12.8 0.0 2.2 8.5 0.0 2.1 2 0 0 2 2 2 0 Auxin responsive protein CcmH PF03918.14 ORF422 - 0.0026 17.0 0.2 0.0029 16.9 0.2 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein cIII PF08134.11 ORF41123 - 0.13 12.1 0.8 5.8 6.8 0.0 2.2 2 0 0 2 2 2 0 cIII protein family PTSIIB_sorb PF03830.15 ORF39714 - 0.17 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 PTS system sorbose subfamily IIB component UL141 PF16758.5 ORF39493 - 0.048 13.4 0.0 0.051 13.3 0.0 1.0 1 0 0 1 1 1 0 Herpes-like virus membrane glycoprotein UL141 PBP3 PF18056.1 ORF39346 - 0.072 13.2 0.0 0.075 13.2 0.0 1.1 1 0 0 1 1 1 0 Penicillin Binding Protein 3 Domain MIP PF00230.20 ORF38562 - 0.0022 17.8 0.5 0.0039 16.9 0.5 1.4 1 1 0 1 1 1 1 Major intrinsic protein TrmO PF01980.16 ORF38349 - 0.066 13.4 0.0 0.072 13.3 0.0 1.1 1 0 0 1 1 1 0 tRNA-methyltransferase O Topo_C_assoc PF14370.6 ORF38349 - 0.088 12.8 0.1 0.13 12.2 0.1 1.4 1 1 0 1 1 1 0 C-terminal topoisomerase domain NTP_transf_2 PF01909.23 ORF38282 - 5.6e-08 33.0 0.0 6.8e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 ORF38282 - 0.00011 22.2 0.0 0.00019 21.5 0.0 1.5 1 1 1 2 2 2 1 Polymerase beta, Nucleotidyltransferase DUF4269 PF14091.6 ORF38282 - 0.029 14.6 0.0 0.034 14.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) CA_like PF10563.9 ORF37915 - 2.3e-12 47.2 0.2 3e-12 46.8 0.2 1.2 1 0 0 1 1 1 1 Putative carbonic anhydrase PCSK9_C3 PF18463.1 ORF37828 - 0.034 14.4 2.1 0.044 14.0 2.1 1.3 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain DUF1611_N PF17396.2 ORF37349 - 0.099 12.9 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_N) Rossmann-like domain Phage_SSB PF16773.5 ORF37254 - 0.022 14.8 0.1 0.024 14.7 0.1 1.1 1 0 0 1 1 1 0 Lactococcus phage single-stranded DNA binding protein DUF3793 PF12672.7 ORF37218 - 0.065 13.3 0.1 0.073 13.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3793) MORN PF02493.20 ORF36694 - 5.8e-13 47.9 20.9 1e-05 25.1 1.5 4.1 4 0 0 4 4 4 4 MORN repeat PMR5N PF14416.6 ORF36694 - 0.064 13.6 6.3 0.15 12.4 0.8 2.7 1 1 2 3 3 3 0 PMR5 N terminal Domain Ras PF00071.22 ORF36116 - 5.9e-16 58.5 0.5 6.5e-16 58.4 0.5 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF36116 - 7.4e-09 35.9 0.1 8.2e-09 35.7 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF36116 - 1.9e-06 27.5 0.4 1.9e-06 27.5 0.4 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Dymeclin PF09742.9 ORF35744 - 1.4e-09 37.0 0.1 1.5e-09 36.9 0.1 1.0 1 0 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein Hid1 PF12722.7 ORF35744 - 8.6e-09 34.1 0.3 8.6e-09 34.1 0.3 1.0 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein Tubulin_C PF03953.17 ORF35065 - 0.0097 16.1 0.0 0.012 15.8 0.0 1.1 1 0 0 1 1 1 1 Tubulin C-terminal domain Smg4_UPF3 PF03467.15 ORF34320 - 0.035 14.1 0.1 0.038 14.0 0.1 1.1 1 0 0 1 1 1 0 Smg-4/UPF3 family NiFe-hyd_HybE PF11939.8 ORF34054 - 0.0039 17.1 0.1 0.0048 16.8 0.1 1.2 1 0 0 1 1 1 1 [NiFe]-hydrogenase assembly, chaperone, HybE Plant_all_beta PF10532.9 ORF33765 - 0.0022 18.3 4.0 0.0032 17.7 4.0 1.3 1 1 0 1 1 1 1 Plant specific N-all beta domain Mitoc_L55 PF09776.9 ORF33765 - 0.13 12.0 4.4 0.15 11.8 4.4 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L55 Sugar_tr PF00083.24 ORF33504 - 2.2e-09 36.7 0.1 2.3e-09 36.7 0.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Corona_NS4 PF03905.13 ORF33260 - 0.0034 17.3 2.0 0.095 12.7 0.2 2.2 2 0 0 2 2 2 2 Coronavirus non-structural protein NS4 MAR_sialic_bdg PF10564.9 ORF33206 - 0.0056 16.7 0.3 0.0061 16.6 0.3 1.2 1 0 0 1 1 1 1 Sialic-acid binding micronemal adhesive repeat CHZ PF09649.10 ORF33151 - 0.07 12.6 1.4 0.13 11.8 1.4 1.4 1 0 0 1 1 1 0 Histone chaperone domain CHZ LppA PF16708.5 ORF32026 - 0.13 12.2 0.1 0.14 12.1 0.1 1.1 1 0 0 1 1 1 0 Lipoprotein confined to pathogenic Mycobacterium Tmemb_14 PF03647.13 ORF31816 - 3.4e-09 37.3 0.9 3.8e-09 37.2 0.9 1.0 1 0 0 1 1 1 1 Transmembrane proteins 14C Rad60-SLD PF11976.8 ORF31549 - 2.6e-14 52.8 2.8 1.4e-07 31.2 0.1 2.0 1 1 1 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 ORF31549 - 0.023 14.5 0.2 0.6 9.9 0.2 2.0 1 1 0 1 1 1 0 Ubiquitin family Adeno_E3B PF03376.14 ORF31348 - 3.6 7.9 13.8 3.7 7.8 2.2 2.1 1 1 1 2 2 2 0 Adenovirus E3B protein TMCO5 PF14992.6 ORF31348 - 6.9 6.2 6.1 10 5.6 6.1 1.3 1 0 0 1 1 1 0 TMCO5 family Gpr1_Fun34_YaaH PF01184.19 ORF31335 - 0.016 14.8 0.4 0.018 14.7 0.4 1.0 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family Ank PF00023.30 ORF31166 - 0.0098 16.3 0.0 0.015 15.8 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeat Pkinase PF00069.25 ORF30875 - 1.1e-13 51.2 0.1 1.1e-13 51.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30875 - 3.1e-08 33.2 0.1 3.1e-08 33.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Act-Frag_cataly PF09192.10 ORF30875 - 0.012 15.0 0.1 0.013 14.9 0.1 1.0 1 0 0 1 1 1 0 Actin-fragmin kinase, catalytic HERV-K_env_2 PF13804.6 ORF30875 - 0.1 12.3 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Retro-transcribing viruses envelope glycoprotein SAB PF04382.13 ORF30875 - 0.13 12.4 0.1 0.24 11.5 0.1 1.5 1 0 0 1 1 1 0 SAB domain Bac_DNA_binding PF00216.21 ORF30875 - 0.14 12.3 0.1 18 5.6 0.0 2.1 2 0 0 2 2 2 0 Bacterial DNA-binding protein GCD14 PF08704.10 ORF30809 - 0.16 11.7 8.7 0.15 11.7 8.7 1.0 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Endonuc-BsobI PF09194.10 ORF30809 - 0.23 10.6 6.2 0.24 10.5 6.2 1.1 1 0 0 1 1 1 0 Restriction endonuclease BsobI Herpes_DNAp_acc PF04929.12 ORF30707 - 2.1 7.3 7.0 2.3 7.1 7.0 1.0 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Ank_4 PF13637.6 ORF30054 - 7.2e-19 67.9 3.1 3.2e-09 37.2 0.2 2.5 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF30054 - 3.5e-14 51.5 0.2 6.9e-06 26.0 0.1 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF30054 - 1.3e-12 47.7 1.0 2.2e-05 24.6 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF30054 - 1.8e-12 47.7 0.2 2.4e-12 47.3 0.2 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF30054 - 2.3e-10 40.4 0.2 0.00053 20.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Phage_T7_Capsid PF05396.11 ORF30054 - 0.098 13.0 0.0 0.36 11.2 0.0 1.7 1 1 1 2 2 2 0 Phage T7 capsid assembly protein DUF5511 PF17630.2 ORF29278 - 0.13 12.5 0.1 0.16 12.2 0.1 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5511) Stevor PF17410.2 ORF29053 - 0.055 13.0 1.0 0.06 12.9 1.0 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Ost5 PF05251.12 ORF28134 - 0.86 9.9 9.0 0.72 10.2 4.2 2.1 2 0 0 2 2 2 0 Oligosaccharyltransferase subunit 5 SasG_E PF17041.5 ORF26664 - 0.076 13.0 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 E domain ESM4 PF15952.5 ORF25951 - 0.49 10.8 2.7 0.64 10.4 2.7 1.2 1 0 0 1 1 1 0 Enhancer of split M4 family WD40 PF00400.32 ORF2579 - 0.0033 18.2 0.1 0.0046 17.8 0.1 1.3 1 0 0 1 1 1 1 WD domain, G-beta repeat SRTM1 PF15872.5 ORF25683 - 0.15 12.2 0.1 0.15 12.2 0.1 1.5 2 0 0 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 MFS_1 PF07690.16 ORF25167 - 2.6e-09 36.5 3.8 2.8e-09 36.4 3.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Calpain_III PF01067.22 ORF25083 - 0.03 14.6 0.0 0.03 14.6 0.0 1.2 1 0 0 1 1 1 0 Calpain large subunit, domain III BT1 PF03092.16 ORF24595 - 0.0038 15.5 0.4 0.0045 15.3 0.4 1.0 1 0 0 1 1 1 1 BT1 family DUF5433 PF17498.2 ORF24595 - 0.047 13.9 0.8 0.058 13.6 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5433) Saf_2TM PF18303.1 ORF23784 - 2.2 7.9 5.2 2.2 7.9 5.2 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain DUF4834 PF16118.5 ORF2369 - 0.26 12.3 1.9 0.33 11.9 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) FANCI_S3 PF14677.6 ORF23644 - 0.0087 15.8 0.2 0.0098 15.6 0.2 1.1 1 0 0 1 1 1 1 FANCI solenoid 3 RcbX PF02341.15 ORF23644 - 0.016 15.4 0.0 0.018 15.3 0.0 1.1 1 0 0 1 1 1 0 RbcX protein Choline_kin_N PF04428.14 ORF23513 - 0.11 12.2 0.1 0.26 11.0 0.0 1.7 2 0 0 2 2 2 0 Choline kinase N terminus MFS_1 PF07690.16 ORF23508 - 2.6e-09 36.5 3.8 2.8e-09 36.4 3.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily SCP_3 PF17844.1 ORF23464 - 0.046 13.5 0.0 0.056 13.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial SCP ortholog RRM_1 PF00076.22 ORF23448 - 3e-05 23.8 0.0 3.3e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF23448 - 0.12 12.0 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF863 PF05904.11 ORF23291 - 0.22 9.9 1.4 0.23 9.9 1.4 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) HrpB_C PF08482.10 ORF23241 - 0.15 12.4 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 ATP-dependent helicase C-terminal Metallothio_11 PF02066.15 ORF23215 - 0.33 11.2 8.6 0.28 11.4 7.4 1.5 1 1 0 1 1 1 0 Metallothionein family 11 Fe-S_biosyn PF01521.20 ORF22730 - 0.086 13.0 0.0 0.098 12.9 0.0 1.2 1 1 0 1 1 1 0 Iron-sulphur cluster biosynthesis Ras PF00071.22 ORF22727 - 2e-10 40.5 0.1 2.1e-10 40.4 0.1 1.1 1 0 0 1 1 1 1 Ras family Prenyltrans PF00432.21 ORF22660 - 1.6e-13 50.1 0.0 2e-13 49.8 0.0 1.1 1 0 0 1 1 1 1 Prenyltransferase and squalene oxidase repeat DrsE_2 PF13686.6 ORF22660 - 0.099 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 DsrE/DsrF/DrsH-like family TRAM_LAG1_CLN8 PF03798.16 ORF21922 - 0.017 14.9 0.1 0.019 14.7 0.1 1.1 1 0 0 1 1 1 0 TLC domain DUF4047 PF13256.6 ORF21321 - 0.015 15.5 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4047) TraH PF06122.11 ORF21321 - 0.17 11.2 0.1 0.18 11.0 0.1 1.0 1 0 0 1 1 1 0 Conjugative relaxosome accessory transposon protein P22_Tail-4 PF11650.8 ORF21009 - 0.016 15.2 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 P22 tail accessory factor Amidase PF01425.21 ORF20936 - 0.018 14.0 0.5 0.02 13.8 0.5 1.0 1 0 0 1 1 1 0 Amidase zf-H2C2_2 PF13465.6 ORF20669 - 1.1e-09 38.2 8.6 3.9e-08 33.4 3.3 2.1 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF20669 - 3.1e-06 27.3 4.2 3.1e-06 27.3 4.2 2.1 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF20669 - 0.00058 20.5 2.6 0.00058 20.5 2.6 1.8 2 0 0 2 2 2 1 C2H2-type zinc finger GAGA PF09237.11 ORF20669 - 0.0066 16.2 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 GAGA factor CH_2 PF06294.11 ORF20669 - 0.031 14.4 0.4 0.037 14.1 0.4 1.1 1 0 0 1 1 1 0 CH-like domain in sperm protein FPRL1_inhibitor PF16104.5 ORF20669 - 0.064 13.4 0.5 0.24 11.5 0.3 1.7 1 1 1 2 2 2 0 Formyl peptide receptor-like 1 inhibitory protein zf-C2H2_6 PF13912.6 ORF20669 - 0.065 13.2 1.9 0.1 12.6 1.9 1.3 1 0 0 1 1 1 0 C2H2-type zinc finger zf-CHY PF05495.12 ORF20669 - 0.07 13.6 2.6 0.084 13.4 2.6 1.3 1 1 0 1 1 1 0 CHY zinc finger Cytochrome_C7 PF14522.6 ORF20669 - 0.079 13.0 2.8 0.083 12.9 2.8 1.3 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c zf-BED PF02892.15 ORF20669 - 0.13 12.3 2.9 0.2 11.7 2.9 1.3 1 0 0 1 1 1 0 BED zinc finger zf-met PF12874.7 ORF20669 - 0.15 12.5 1.6 0.15 12.5 1.6 1.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF20669 - 0.45 10.9 5.5 0.23 11.8 2.8 2.0 1 1 1 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-H2C2_5 PF13909.6 ORF20669 - 0.62 9.9 12.2 0.91 9.3 7.5 2.9 2 1 0 2 2 2 0 C2H2-type zinc-finger domain DUF4646 PF15496.6 ORF19203 - 0.11 13.1 0.0 0.15 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4646) Herpes_UL52 PF03121.15 ORF1899 - 0.038 13.9 0.1 0.038 13.9 0.1 1.8 1 1 1 2 2 2 0 Herpesviridae UL52/UL70 DNA primase Nab6_mRNP_bdg PF10567.9 ORF1899 - 0.045 13.2 1.2 0.045 13.2 1.2 1.0 1 0 0 1 1 1 0 RNA-recognition motif DUF4794 PF16042.5 ORF18898 - 0.068 14.2 0.0 0.11 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4794) Plasmodium_HRP PF05403.11 ORF18841 - 0.0046 16.8 1.4 0.0053 16.6 1.4 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF18841 - 0.081 12.9 5.5 1.3 9.0 0.6 2.2 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain SLH PF00395.20 ORF18841 - 1.5 8.8 5.1 4.6 7.3 0.3 2.5 1 1 1 2 2 2 0 S-layer homology domain DUF4375 PF14300.6 ORF18841 - 6.6 7.0 6.8 30 4.9 6.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) LAGLIDADG_WhiA PF14527.6 ORF18841 - 8.4 6.5 9.5 11 6.1 1.6 2.2 1 1 0 2 2 2 0 WhiA LAGLIDADG-like domain Na_trans_cytopl PF11933.8 ORF18273 - 0.086 12.6 0.3 0.09 12.6 0.3 1.2 1 0 0 1 1 1 0 Cytoplasmic domain of voltage-gated Na+ ion channel KASH PF10541.9 ORF17456 - 0.081 13.2 0.3 0.081 13.2 0.3 1.5 2 0 0 2 2 2 0 Nuclear envelope localisation domain Pro_Al_protease PF02983.14 ORF17393 - 0.016 15.3 0.5 0.038 14.1 0.2 1.7 2 0 0 2 2 2 0 Alpha-lytic protease prodomain DUF5462 PF17547.2 ORF1709 - 0.059 12.7 0.0 0.07 12.5 0.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5462) Arm_2 PF04826.13 ORF16821 - 0.093 12.2 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 Armadillo-like DUF2214 PF09980.9 ORF1674 - 0.25 11.1 5.9 0.27 11.1 5.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2214) Tti2 PF10521.9 ORF16615 - 0.039 13.5 0.1 0.044 13.3 0.1 1.0 1 0 0 1 1 1 0 Tti2 family BT1 PF03092.16 ORF166 - 0.0038 15.5 0.4 0.0045 15.3 0.4 1.0 1 0 0 1 1 1 1 BT1 family DUF5433 PF17498.2 ORF166 - 0.047 13.9 0.8 0.058 13.6 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5433) MscS_TM PF12794.7 ORF16472 - 0.018 13.9 0.0 0.018 13.9 0.0 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Tax PF02959.16 ORF14792 - 0.042 13.3 0.2 0.044 13.2 0.2 1.0 1 0 0 1 1 1 0 HTLV Tax Leu_leader PF08054.11 ORF14766 - 0.22 11.1 1.5 5.4 6.7 0.0 2.5 2 0 0 2 2 2 0 Leucine operon leader peptide IDH PF03971.14 ORF14685 - 0.12 10.7 0.0 0.14 10.6 0.0 1.0 1 0 0 1 1 1 0 Monomeric isocitrate dehydrogenase MOZART1 PF12554.8 ORF14506 - 1.6e-22 79.0 0.3 2e-22 78.7 0.3 1.1 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated RNaseH_pPIWI_RE PF13032.6 ORF14506 - 0.044 13.7 0.0 0.045 13.7 0.0 1.1 1 0 0 1 1 1 0 RNaseH domain of pPIWI_RE SPOB_ab PF14682.6 ORF14455 - 0.0041 17.2 0.3 0.0045 17.1 0.3 1.1 1 0 0 1 1 1 1 Sporulation initiation phospho-transferase B, C-terminal DUF1866 PF08952.11 ORF14455 - 0.046 13.6 0.7 0.047 13.5 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1866) DUF1441 PF07278.11 ORF13983 - 0.017 15.1 0.1 0.018 15.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1441) zf-C2H2_assoc3 PF16637.5 ORF13983 - 0.05 13.8 1.0 0.068 13.4 1.0 1.2 1 0 0 1 1 1 0 Putative zinc-finger between two C2H2 zinc-fingers on Patz Ras PF00071.22 ORF13528 - 5.9e-16 58.5 0.5 6.5e-16 58.4 0.5 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF13528 - 7.4e-09 35.9 0.1 8.2e-09 35.7 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF13528 - 1.9e-06 27.5 0.4 1.9e-06 27.5 0.4 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family RAM PF15320.6 ORF12591 - 0.2 12.3 4.3 0.37 11.4 4.3 1.5 1 1 0 1 1 1 0 mRNA cap methylation, RNMT-activating mini protein zn-ribbon_14 PF16503.5 ORF12254 - 0.044 13.3 0.8 0.073 12.6 0.8 1.3 1 0 0 1 1 1 0 Zinc-ribbon PITH PF06201.13 ORF11564 - 1.3e-12 48.2 0.0 1.5e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 PITH domain Auxin_inducible PF02519.14 ORF11331 - 0.1 12.8 0.0 2.2 8.5 0.0 2.1 2 0 0 2 2 2 0 Auxin responsive protein DUF1168 PF06658.12 ORF112420 - 0.036 13.9 2.0 0.036 13.9 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) FBA_2 PF07735.17 ORF111637 - 0.1 12.8 3.0 0.16 12.1 3.0 1.4 1 0 0 1 1 1 0 F-box associated DUF5462 PF17547.2 ORF111502 - 0.11 11.9 0.0 0.13 11.6 0.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5462) DUF1611_N PF17396.2 ORF111455 - 0.099 12.9 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_N) Rossmann-like domain HemY_N PF07219.13 ORF110501 - 0.051 13.8 1.2 0.068 13.4 1.2 1.2 1 0 0 1 1 1 0 HemY protein N-terminus DUF3432 PF11914.8 ORF110338 - 0.074 13.3 0.1 0.08 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) FemAB PF02388.16 ORF110338 - 0.15 10.9 0.0 0.16 10.8 0.0 1.0 1 0 0 1 1 1 0 FemAB family MORN PF02493.20 ORF109464 - 3.9e-11 42.2 3.8 0.00011 21.8 0.1 3.5 3 1 0 3 3 3 3 MORN repeat ApbA PF02558.16 ORF109165 - 0.11 12.1 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Phage_SSB PF16773.5 ORF109127 - 0.022 14.8 0.1 0.024 14.7 0.1 1.1 1 0 0 1 1 1 0 Lactococcus phage single-stranded DNA binding protein Gypsy PF07253.11 ORF108040 - 0.009 14.6 0.2 0.011 14.4 0.2 1.1 1 0 0 1 1 1 1 Gypsy protein MAR_sialic_bdg PF10564.9 ORF10707 - 0.082 13.0 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 Sialic-acid binding micronemal adhesive repeat RBM1CTR PF08081.11 ORF10649 - 0.4 10.8 4.1 0.28 11.3 1.1 1.9 2 0 0 2 2 2 0 RBM1CTR (NUC064) family ZapD PF07072.11 ORF106172 - 4.3e-17 62.6 0.0 4.9e-17 62.4 0.0 1.0 1 0 0 1 1 1 1 Cell division protein DUF5060 PF16586.5 ORF106172 - 0.081 13.3 0.0 0.25 11.7 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5060) SLATT_6 PF18169.1 ORF106163 - 0.072 12.7 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 DUF4870 PF09685.10 ORF105691 - 0.013 15.5 0.0 0.015 15.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4870) Pkinase PF00069.25 ORF105349 - 5.2e-11 42.4 0.0 6e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105349 - 2.4e-06 27.0 0.0 2.5e-06 27.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF105349 - 0.052 12.9 0.0 0.052 12.9 0.0 1.1 1 0 0 1 1 1 0 Kinase-like HrpB_C PF08482.10 ORF104741 - 0.15 12.4 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 ATP-dependent helicase C-terminal SapB_2 PF03489.17 ORF104556 - 0.16 12.1 1.5 7 6.9 0.1 2.6 2 1 0 2 2 2 0 Saposin-like type B, region 2 Hema_esterase PF03996.15 ORF10436 - 0.043 13.6 0.7 0.041 13.6 0.7 1.1 1 0 0 1 1 1 0 Hemagglutinin esterase DNA_pol_viral_N PF00242.17 ORF10384 - 0.04 13.4 1.4 0.045 13.2 1.4 1.0 1 0 0 1 1 1 0 DNA polymerase (viral) N-terminal domain Dynamitin PF04912.14 ORF103596 - 0.0036 16.7 1.6 0.0037 16.6 1.6 1.0 1 0 0 1 1 1 1 Dynamitin FMN_bind_2 PF04299.12 ORF103596 - 0.013 15.3 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 Putative FMN-binding domain ZapB PF06005.12 ORF103596 - 0.032 14.7 4.1 0.051 14.0 4.1 1.3 1 0 0 1 1 1 0 Cell division protein ZapB DUF4337 PF14235.6 ORF103596 - 0.1 12.7 2.1 0.11 12.6 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) MFS_1 PF07690.16 ORF103205 - 2.6e-09 36.5 3.8 2.8e-09 36.4 3.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MPC PF03650.13 ORF102865 - 1.1e-18 67.4 1.8 1.3e-18 67.2 1.8 1.1 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers CBFB_NFYA PF02045.15 ORF102652 - 0.0031 18.1 3.9 0.0031 18.1 3.9 1.6 2 0 0 2 2 2 1 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B DUF4972 PF16342.5 ORF102534 - 0.022 14.4 1.2 0.026 14.2 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) T4_Rnl2_C PF18043.1 ORF102534 - 0.023 14.8 1.6 0.18 12.0 1.6 2.0 1 1 0 1 1 1 0 T4 RNA ligase 2 C-terminal SNase PF00565.17 ORF102534 - 0.058 13.9 0.3 0.063 13.8 0.3 1.1 1 0 0 1 1 1 0 Staphylococcal nuclease homologue RST PF12174.8 ORF102055 - 0.18 11.7 1.9 0.47 10.4 0.0 2.2 2 1 0 3 3 3 0 RCD1-SRO-TAF4 (RST) plant domain Gp_dh_N PF00044.24 ORF102053 - 0.1 12.9 0.4 0.12 12.7 0.4 1.1 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DUF4441 PF14536.6 ORF102053 - 4.8 7.4 15.9 0.35 11.1 6.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4441) SelK_SelG PF10961.8 ORF101920 - 3.2 8.4 4.3 4.4 8.0 4.3 1.4 1 1 0 1 1 1 0 Selenoprotein SelK_SelG # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks312.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks312.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks312.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks312.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CLIP PF12032.8 ORF100855 - 0.099 12.9 0.1 0.19 12.1 0.0 1.4 1 1 0 1 1 1 0 Regulatory CLIP domain of proteinases Kinin PF08260.11 ORF100739 - 0.68 10.6 4.6 1.9 9.3 4.6 1.8 1 0 0 1 1 1 0 Insect kinin peptide CagE_TrbE_VirB PF03135.14 ORF100655 - 0.049 13.7 0.1 0.052 13.6 0.1 1.2 1 0 0 1 1 1 0 CagE, TrbE, VirB family, component of type IV transporter system DUF4680 PF15730.5 ORF100588 - 0.09 13.1 2.4 0.12 12.8 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4680) DUF1449 PF07290.11 ORF100562 - 0.15 11.7 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1449) OxoGdeHyase_C PF16870.5 ORF100176 - 1.8e-25 89.4 0.1 1.9e-25 89.3 0.1 1.0 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal Nab1 PF04902.12 NODE_69211_length_229_cov_0.824742_g61270_i0forward_frame_1 - 0.064 13.7 0.0 0.069 13.6 0.0 1.0 1 0 0 1 1 1 0 Conserved region in Nab1 PspB PF06667.12 NODE_69202_length_229_cov_0.927835_g61261_i0reverse_frame_1 - 0.41 10.7 3.0 0.57 10.3 3.0 1.2 1 0 0 1 1 1 0 Phage shock protein B Pkinase PF00069.25 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 2.9e-10 40.0 0.2 2.9e-10 40.0 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 7.5e-05 22.1 0.1 8.1e-05 22.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 0.00063 19.2 0.4 0.00068 19.1 0.4 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 0.0017 17.2 0.1 0.0017 17.2 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 0.0061 15.9 0.1 0.0062 15.9 0.1 1.1 1 0 0 1 1 1 1 Kinase-like ARL2_Bind_BART PF11527.8 NODE_69194_length_229_cov_1.030928_g61253_i0reverse_frame_1 - 0.0078 16.3 1.2 0.0079 16.3 1.2 1.1 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART CCER1 PF15482.6 NODE_69189_length_229_cov_1.139175_g61248_i0forward_frame_1 - 0.13 12.2 0.5 0.13 12.1 0.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 Med19 PF10278.9 NODE_69187_length_229_cov_1.175258_g61246_i0reverse_frame_1 - 2.2 8.2 8.7 2.7 7.9 8.7 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 pKID PF02173.17 NODE_69187_length_229_cov_1.175258_g61246_i0forward_frame_1 - 0.058 12.9 1.4 0.058 12.9 1.4 1.7 2 0 0 2 2 2 0 pKID domain DUF4282 PF14110.6 NODE_69185_length_229_cov_1.180412_g61244_i0forward_frame_1 - 0.044 14.5 0.9 0.053 14.3 0.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4282) Lamprin PF06403.11 NODE_69183_length_229_cov_1.201031_g61242_i0reverse_frame_1 - 0.018 15.0 0.1 0.018 15.0 0.1 1.1 1 0 0 1 1 1 0 Lamprin AcylCoA_dehyd_C PF12186.8 NODE_69163_length_229_cov_1.252577_g61222_i0reverse_frame_1 - 0.21 11.7 0.0 0.25 11.5 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase C terminal MiAMP1 PF09117.10 NODE_69163_length_229_cov_1.252577_g61222_i0forward_frame_1 - 0.068 13.4 0.0 0.09 13.0 0.0 1.3 1 0 0 1 1 1 0 MiAMP1 Leader_Trp PF08255.11 NODE_69160_length_229_cov_1.288660_g61219_i0reverse_frame_1 - 0.033 14.1 1.1 0.11 12.5 1.1 1.9 1 0 0 1 1 1 0 Trp-operon Leader Peptide DUF3514 PF12027.8 NODE_69158_length_229_cov_1.293814_g61217_i0reverse_frame_1 - 0.012 15.4 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3514) Kunitz_BPTI PF00014.23 NODE_69158_length_229_cov_1.293814_g61217_i0reverse_frame_1 - 0.098 12.9 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Kunitz/Bovine pancreatic trypsin inhibitor domain POLO_box PF00659.18 NODE_69155_length_229_cov_1.309278_g61214_i0reverse_frame_1 - 0.11 12.7 0.9 0.14 12.4 0.2 1.6 2 0 0 2 2 2 0 POLO box duplicated region Glyco_trans_1_4 PF13692.6 NODE_69144_length_229_cov_1.386598_g61203_i0forward_frame_1 - 0.0011 19.4 0.0 0.0013 19.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 NODE_69144_length_229_cov_1.386598_g61203_i0forward_frame_1 - 0.15 11.6 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 Pox_A3L PF05288.11 NODE_69142_length_229_cov_1.402062_g61201_i0reverse_frame_1 - 0.11 12.5 0.1 8.1 6.5 0.0 2.1 2 0 0 2 2 2 0 Poxvirus A3L Protein DUF5389 PF17364.2 NODE_69138_length_229_cov_1.412371_g61197_i0forward_frame_1 - 0.0064 16.5 0.2 0.0071 16.4 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5389) DUF4307 PF14155.6 NODE_69137_length_229_cov_1.443299_g61196_i0reverse_frame_1 - 0.052 13.4 0.2 0.077 12.8 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4307) PT PF04886.12 NODE_69135_length_229_cov_1.458763_g61194_i0reverse_frame_1 - 0.049 13.2 7.4 0.081 12.5 7.4 1.3 1 0 0 1 1 1 0 PT repeat DUF4735 PF15882.5 NODE_69135_length_229_cov_1.458763_g61194_i0reverse_frame_1 - 0.13 11.6 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4735) DUF3514 PF12027.8 NODE_69129_length_229_cov_1.500000_g61188_i0reverse_frame_1 - 0.012 15.4 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3514) Kunitz_BPTI PF00014.23 NODE_69129_length_229_cov_1.500000_g61188_i0reverse_frame_1 - 0.093 13.0 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Kunitz/Bovine pancreatic trypsin inhibitor domain zf-C2HC5 PF06221.13 NODE_69128_length_229_cov_1.505155_g61187_i0forward_frame_1 - 0.039 13.9 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type Nudix_N_2 PF14803.6 NODE_69128_length_229_cov_1.505155_g61187_i0forward_frame_1 - 0.7 9.9 3.4 0.89 9.5 0.1 2.5 3 0 0 3 3 3 0 Nudix N-terminal Pox_EPC_I2-L1 PF12575.8 NODE_69120_length_229_cov_1.608247_g61179_i0forward_frame_1 - 0.053 13.7 0.7 0.063 13.5 0.7 1.1 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 DUF919 PF06034.11 NODE_69113_length_229_cov_1.634021_g61172_i0forward_frame_1 - 0.13 12.2 4.0 0.29 11.0 4.0 1.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF919) RVT_1 PF00078.27 NODE_69107_length_229_cov_1.639175_g61166_i0reverse_frame_1 - 2.2e-11 43.7 0.0 2.3e-11 43.7 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) VIT PF08487.10 NODE_69100_length_229_cov_1.649485_g61159_i0reverse_frame_1 - 0.00037 20.7 0.0 0.00041 20.5 0.0 1.1 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Pombe_5TM PF09437.10 NODE_69097_length_229_cov_1.695876_g61156_i0reverse_frame_1 - 0.026 14.2 2.6 0.029 14.0 2.6 1.1 1 0 0 1 1 1 0 Pombe specific 5TM protein Phage_holin_T PF11031.8 NODE_69096_length_229_cov_1.695876_g61155_i0reverse_frame_1 - 0.067 12.7 0.7 0.073 12.5 0.7 1.1 1 0 0 1 1 1 0 Bacteriophage T holin BfiI_DBD PF18243.1 NODE_69094_length_229_cov_1.716495_g61153_i0forward_frame_1 - 0.057 13.0 0.5 0.06 12.9 0.5 1.1 1 0 0 1 1 1 0 Metal-independent restriction enzyme BfiI DNA binding domain LRR_6 PF13516.6 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 4.8e-06 26.2 0.2 0.0066 16.4 0.0 3.1 3 0 0 3 3 3 2 Leucine Rich repeat LRR_4 PF12799.7 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 0.00074 19.9 2.5 0.028 14.9 0.4 2.5 2 0 0 2 2 2 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 0.0047 16.7 2.5 0.3 10.9 0.3 2.4 2 1 0 2 2 2 2 Leucine rich repeat FNIP PF05725.12 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 0.01 16.0 1.4 2 8.6 0.1 3.0 3 0 0 3 3 3 0 FNIP Repeat LRR_1 PF00560.33 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 0.081 13.5 4.3 0.78 10.5 0.6 3.0 2 2 0 2 2 2 0 Leucine Rich Repeat GON PF08685.11 NODE_69087_length_229_cov_1.788660_g61146_i0reverse_frame_1 - 0.025 14.5 0.1 0.025 14.5 0.1 1.1 1 0 0 1 1 1 0 GON domain HTH_28 PF13518.6 NODE_69080_length_229_cov_1.829897_g61139_i0reverse_frame_1 - 0.18 11.9 0.2 0.18 11.9 0.2 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Biopterin_H PF00351.21 NODE_69079_length_229_cov_1.835052_g61138_i0forward_frame_1 - 0.053 12.6 0.1 0.055 12.5 0.1 1.0 1 0 0 1 1 1 0 Biopterin-dependent aromatic amino acid hydroxylase Peptidase_M48 PF01435.18 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 1.2e-19 70.9 0.3 1.3e-19 70.8 0.3 1.0 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 2e-05 23.9 0.0 2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 Peptidase_M1 PF01433.20 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 0.0022 17.6 0.0 0.0024 17.5 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M1 domain SprT-like PF10263.9 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 0.057 13.3 0.0 0.064 13.1 0.0 1.1 1 0 0 1 1 1 0 SprT-like family DUF2201_N PF13203.6 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 0.2 11.2 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain Frigida PF07899.11 NODE_69068_length_229_cov_1.891753_g61127_i0reverse_frame_1 - 0.11 11.7 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Frigida-like protein TMIE PF16038.5 NODE_69056_length_229_cov_2.025773_g61115_i0forward_frame_1 - 0.023 14.5 0.2 0.031 14.1 0.2 1.1 1 0 0 1 1 1 0 TMIE protein Phe_tRNA-synt_N PF02912.18 NODE_69055_length_229_cov_2.030928_g61114_i0forward_frame_1 - 3.1e-16 59.1 3.1 3.9e-16 58.7 3.1 1.1 1 0 0 1 1 1 1 Aminoacyl tRNA synthetase class II, N-terminal domain FAD-oxidase_C PF02913.19 NODE_69055_length_229_cov_2.030928_g61114_i0forward_frame_1 - 0.018 14.7 0.0 0.019 14.6 0.0 1.0 1 0 0 1 1 1 0 FAD linked oxidases, C-terminal domain SCAPER_N PF16501.5 NODE_69054_length_229_cov_2.046392_g61113_i0reverse_frame_1 - 0.2 11.7 0.3 0.22 11.6 0.3 1.2 1 0 0 1 1 1 0 S phase cyclin A-associated protein in the endoplasmic reticulum Tir_receptor_N PF07490.11 NODE_69047_length_229_cov_2.097938_g61106_i0reverse_frame_1 - 0.19 11.5 2.5 0.22 11.3 2.5 1.1 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) N-terminus zf-C2H2_10 PF16588.5 NODE_69041_length_229_cov_2.201031_g61100_i0reverse_frame_1 - 0.094 12.5 0.5 0.13 12.0 0.5 1.2 1 0 0 1 1 1 0 C2H2 zinc-finger DUF2559 PF10832.8 NODE_69040_length_229_cov_2.206186_g61099_i0reverse_frame_1 - 0.05 13.7 0.0 0.072 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2559) MRP-S24 PF14955.6 NODE_69039_length_229_cov_2.231959_g61098_i0forward_frame_1 - 1.2 9.1 5.0 1.4 8.9 5.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S24 TMCO5 PF14992.6 NODE_69034_length_229_cov_2.314433_g61093_i0reverse_frame_1 - 5.1 6.6 5.4 5.5 6.5 5.4 1.2 1 0 0 1 1 1 0 TMCO5 family DUF3427 PF11907.8 NODE_69032_length_229_cov_2.350515_g61091_i0reverse_frame_1 - 0.017 14.4 0.1 0.02 14.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3427) TRAP_beta PF05753.14 NODE_69032_length_229_cov_2.350515_g61091_i0forward_frame_1 - 0.093 12.1 0.6 0.12 11.7 0.6 1.1 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) Fimbrial PF00419.20 NODE_69030_length_229_cov_2.355670_g61089_i0reverse_frame_1 - 9.4e-07 29.2 0.0 1e-06 29.1 0.0 1.0 1 0 0 1 1 1 1 Fimbrial protein C_LFY_FLO PF17538.2 NODE_69029_length_229_cov_2.463918_g61088_i0reverse_frame_1 - 0.096 12.2 0.1 0.13 11.7 0.1 1.2 1 0 0 1 1 1 0 DNA Binding Domain (C-terminal) Leafy/Floricaula Sclerostin PF05463.11 NODE_69026_length_229_cov_2.541237_g61085_i0forward_frame_1 - 0.07 12.8 0.5 0.073 12.8 0.5 1.1 1 0 0 1 1 1 0 Sclerostin (SOST) DUF2570 PF10828.8 NODE_69024_length_229_cov_2.680412_g61083_i0reverse_frame_1 - 0.061 13.1 0.1 0.086 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) PH PF00169.29 NODE_69019_length_229_cov_2.927835_g61078_i0forward_frame_1 - 8.4e-06 26.2 0.4 1.1e-05 25.8 0.4 1.2 1 0 0 1 1 1 1 PH domain Pkinase PF00069.25 NODE_69017_length_229_cov_3.237113_g61076_i0reverse_frame_1 - 1.1e-11 44.7 0.0 1.1e-11 44.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69017_length_229_cov_3.237113_g61076_i0reverse_frame_1 - 0.0039 16.5 0.0 0.0039 16.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase HemY_N PF07219.13 NODE_69016_length_229_cov_3.283505_g61075_i0reverse_frame_1 - 0.53 10.5 5.2 0.82 9.9 5.2 1.3 1 0 0 1 1 1 0 HemY protein N-terminus SP_C-Propep PF08999.10 NODE_69016_length_229_cov_3.283505_g61075_i0reverse_frame_1 - 3.2 7.6 11.3 4 7.3 11.2 1.4 1 1 0 1 1 1 0 Surfactant protein C, N terminal propeptide HeH PF12949.7 NODE_69011_length_229_cov_3.530928_g61070_i0reverse_frame_1 - 0.036 13.8 0.0 0.054 13.2 0.0 1.3 1 0 0 1 1 1 0 HeH/LEM domain IQ PF00612.27 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 3.1e-05 23.4 15.3 0.039 13.7 1.1 3.4 3 0 0 3 3 3 3 IQ calmodulin-binding motif DUF5617 PF18493.1 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 0.017 15.2 0.4 0.021 14.9 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) TIP49 PF06068.13 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 0.11 11.7 3.9 0.11 11.7 3.9 1.0 1 0 0 1 1 1 0 TIP49 P-loop domain PDDEXK_10 PF07788.11 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 0.77 9.7 7.0 4.1 7.4 7.0 2.0 1 1 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Ribosomal_S17 PF00366.20 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 7.1 6.8 11.6 0.77 9.9 4.3 2.1 1 1 1 2 2 2 0 Ribosomal protein S17 R-HINP1I PF11463.8 NODE_68997_length_229_cov_33.819588_g61056_i0forward_frame_1 - 0.13 11.7 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 R.HinP1I restriction endonuclease Secretin_N_2 PF07655.13 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_1 - 8.3 7.0 21.8 12 6.6 21.8 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain DUF3301 PF11743.8 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 0.0098 15.5 0.3 0.012 15.3 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3301) DUF4834 PF16118.5 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 0.08 13.9 1.0 0.1 13.6 1.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) HemY_N PF07219.13 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 0.24 11.6 9.1 0.23 11.7 8.4 1.4 1 1 0 1 1 1 0 HemY protein N-terminus DUF2207 PF09972.9 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 0.96 8.1 2.6 0.8 8.4 2.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phage_holin_3_6 PF07332.11 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 3.3 7.8 8.3 4.3 7.4 8.3 1.3 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Babuvirus_MP PF07234.11 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 4.7 7.4 8.2 5.2 7.3 8.2 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF1002 PF06207.11 NODE_68988_length_229_cov_39.701031_g61047_i0forward_frame_1 - 0.0033 17.0 2.0 0.0036 16.9 2.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1002) Bac_DNA_binding PF00216.21 NODE_68988_length_229_cov_39.701031_g61047_i0forward_frame_1 - 0.005 17.0 0.4 0.0065 16.7 0.4 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein FeoB_C PF07664.12 NODE_68987_length_229_cov_39.948454_g61046_i0reverse_frame_1 - 0.044 13.5 0.3 0.095 12.4 0.0 1.7 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus HrcA_DNA-bdg PF03444.15 NODE_68984_length_229_cov_43.273196_g61043_i0forward_frame_1 - 0.1 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding PCMT PF01135.19 NODE_68974_length_229_cov_51.149485_g61033_i0reverse_frame_1 - 0.06 13.1 0.0 0.067 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) zf-rbx1 PF12678.7 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 2.2e-07 31.0 0.2 4.3e-07 30.1 0.2 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 1.7e-05 25.0 0.5 2.7e-05 24.4 0.5 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.00036 20.5 0.4 0.00056 19.9 0.4 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.00092 19.0 0.1 0.0014 18.4 0.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.0021 17.9 0.2 0.0034 17.2 0.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.013 15.5 0.1 0.019 15.0 0.1 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.022 14.4 0.1 0.033 13.8 0.1 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.024 14.6 0.2 0.037 14.0 0.2 1.2 1 0 0 1 1 1 0 zinc-RING finger domain RINGv PF12906.7 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.046 13.8 0.2 0.08 13.1 0.2 1.3 1 0 0 1 1 1 0 RING-variant domain Prok-RING_4 PF14447.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.084 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.16 11.7 1.5 0.37 10.6 1.5 1.6 1 0 0 1 1 1 0 RING-like zinc finger DuoxA PF10204.9 NODE_68970_length_229_cov_54.283505_g61029_i0forward_frame_1 - 0.18 10.8 0.7 0.2 10.7 0.7 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor Y_phosphatase PF00102.27 NODE_68959_length_229_cov_77.329897_g61018_i0reverse_frame_1 - 6.5e-10 39.0 0.3 7.9e-10 38.7 0.3 1.0 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DUF3006 PF11213.8 NODE_68959_length_229_cov_77.329897_g61018_i0reverse_frame_1 - 0.14 12.4 0.1 0.27 11.5 0.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3006) DUF4118 PF13493.6 NODE_68956_length_229_cov_82.319588_g61015_i0forward_frame_1 - 0.078 12.8 1.3 0.087 12.6 1.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) DUF2631 PF10939.8 NODE_68953_length_229_cov_92.778351_g61012_i0forward_frame_1 - 0.017 14.9 0.7 0.027 14.3 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) DUF4641 PF15483.6 NODE_68952_length_229_cov_94.345361_g61011_i0forward_frame_1 - 0.0059 15.8 0.3 0.0066 15.6 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4641) Cnd1_N PF12922.7 NODE_68940_length_229_cov_169.051546_g60999_i0forward_frame_1 - 0.0079 16.1 0.1 0.008 16.0 0.1 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1, N-term DUF4012 PF13196.6 NODE_68932_length_229_cov_240.824742_g60991_i0reverse_frame_1 - 0.023 15.2 0.0 0.029 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4012) DUF1415 PF07209.12 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_1 - 0.0026 17.5 3.8 0.39 10.5 0.3 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1415) Ribonuc_red_2_N PF08471.10 NODE_68917_length_230_cov_0.820513_g60976_i0forward_frame_1 - 0.16 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Class II vitamin B12-dependent ribonucleotide reductase FAM194 PF14977.6 NODE_68915_length_230_cov_0.820513_g60974_i0reverse_frame_1 - 0.048 13.0 0.1 0.048 13.0 0.1 1.1 1 0 0 1 1 1 0 FAM194 protein EST1 PF10374.9 NODE_68907_length_230_cov_1.025641_g60966_i0reverse_frame_1 - 0.014 16.0 0.4 0.016 15.8 0.4 1.1 1 0 0 1 1 1 0 Telomerase activating protein Est1 SPC12 PF06645.13 NODE_68907_length_230_cov_1.025641_g60966_i0reverse_frame_1 - 0.046 13.8 0.8 0.058 13.5 0.8 1.2 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) SET_assoc PF11767.8 NODE_68907_length_230_cov_1.025641_g60966_i0forward_frame_1 - 0.037 13.7 0.3 0.049 13.3 0.3 1.3 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated PHM7_cyt PF14703.6 NODE_68907_length_230_cov_1.025641_g60966_i0forward_frame_1 - 0.042 14.1 0.0 0.057 13.7 0.0 1.2 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter TPR_14 PF13428.6 NODE_68905_length_230_cov_1.025641_g60964_i0forward_frame_1 - 0.0098 16.6 0.1 0.014 16.2 0.1 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_68905_length_230_cov_1.025641_g60964_i0forward_frame_1 - 0.082 13.1 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat YMF19 PF02326.15 NODE_68893_length_230_cov_1.153846_g60952_i0forward_frame_1 - 0.096 13.5 2.0 0.11 13.3 2.0 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 ATP-synt_8 PF00895.20 NODE_68893_length_230_cov_1.153846_g60952_i0forward_frame_1 - 0.48 10.9 2.8 0.89 10.1 2.8 1.4 1 0 0 1 1 1 0 ATP synthase protein 8 PET10 PF17316.2 NODE_68892_length_230_cov_1.169231_g60951_i0forward_frame_1 - 0.034 13.7 0.2 0.038 13.5 0.2 1.0 1 0 0 1 1 1 0 Petite colonies protein 10 Coatamer_beta_C PF07718.12 NODE_68891_length_230_cov_1.169231_g60950_i0forward_frame_1 - 0.019 14.9 0.1 0.026 14.4 0.1 1.2 1 0 0 1 1 1 0 Coatomer beta C-terminal region NDK PF00334.19 NODE_68889_length_230_cov_1.189744_g60948_i0forward_frame_1 - 4.2e-27 94.8 0.1 4.5e-27 94.7 0.1 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L34 PF00468.17 NODE_68867_length_230_cov_1.343590_g60926_i0forward_frame_1 - 0.0045 16.9 0.1 0.0065 16.4 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L34 NBP1 PF08537.10 NODE_68862_length_230_cov_1.364103_g60921_i0reverse_frame_1 - 0.031 13.7 2.5 0.035 13.5 2.5 1.3 1 1 0 1 1 1 0 Fungal Nap binding protein NBP1 Spc7 PF08317.11 NODE_68858_length_230_cov_1.405128_g60917_i0reverse_frame_1 - 0.06 12.2 0.3 0.06 12.2 0.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein MbeD_MobD PF04899.12 NODE_68858_length_230_cov_1.405128_g60917_i0reverse_frame_1 - 0.12 12.5 2.4 0.43 10.7 2.4 1.9 1 1 0 1 1 1 0 MbeD/MobD like DUF2206 PF09971.9 NODE_68854_length_230_cov_1.435897_g60913_i0reverse_frame_1 - 0.26 10.0 7.2 0.29 9.8 7.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) Ecm29 PF13001.7 NODE_68854_length_230_cov_1.435897_g60913_i0forward_frame_1 - 0.029 13.1 1.0 0.032 12.9 1.0 1.0 1 0 0 1 1 1 0 Proteasome stabiliser DHHC PF01529.20 NODE_68853_length_230_cov_1.466667_g60912_i0reverse_frame_1 - 2.5e-13 50.3 9.1 3.3e-13 49.9 9.1 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase Med13_C PF06333.12 NODE_68852_length_230_cov_1.482051_g60911_i0reverse_frame_1 - 0.012 14.9 1.1 0.014 14.7 1.1 1.0 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain TEX33 PF15400.6 NODE_68852_length_230_cov_1.482051_g60911_i0forward_frame_1 - 0.1 13.1 0.3 0.11 13.0 0.3 1.1 1 0 0 1 1 1 0 Testis-expressed sequence 33 protein family DUF5318 PF17249.2 NODE_68845_length_230_cov_1.548718_g60904_i0reverse_frame_1 - 0.085 12.6 0.1 0.098 12.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5318) DUF5110 PF17137.4 NODE_68837_length_230_cov_1.635897_g60896_i0reverse_frame_1 - 1.7e-07 31.4 0.9 2.3e-07 31.0 0.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Vac14_Fab1_bd PF12755.7 NODE_68835_length_230_cov_1.641026_g60894_i0forward_frame_1 - 0.01 16.4 0.1 0.027 15.0 0.1 1.7 1 1 0 1 1 1 0 Vacuolar 14 Fab1-binding region HEAT PF02985.22 NODE_68835_length_230_cov_1.641026_g60894_i0forward_frame_1 - 0.016 15.4 0.0 0.9 10.0 0.0 2.7 3 1 1 4 4 4 0 HEAT repeat DUF2774 PF11242.8 NODE_68835_length_230_cov_1.641026_g60894_i0forward_frame_1 - 0.081 13.1 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) DUF1653 PF07866.11 NODE_68825_length_230_cov_1.728205_g60884_i0forward_frame_1 - 0.022 15.0 0.4 0.025 14.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1653) PX PF00787.24 NODE_68821_length_230_cov_1.743590_g60880_i0reverse_frame_1 - 4.4e-14 52.4 3.0 4.4e-14 52.4 3.0 1.0 1 0 0 1 1 1 1 PX domain PBP_sp32 PF07222.12 NODE_68821_length_230_cov_1.743590_g60880_i0forward_frame_1 - 0.088 12.3 1.5 0.097 12.1 1.5 1.0 1 0 0 1 1 1 0 Proacrosin binding protein sp32 BDV_M PF16520.5 NODE_68818_length_230_cov_1.758974_g60877_i0reverse_frame_1 - 0.071 13.5 0.0 0.08 13.3 0.0 1.2 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae SUKH-3 PF14433.6 NODE_68817_length_230_cov_1.758974_g60876_i0reverse_frame_1 - 0.091 13.2 0.1 0.092 13.2 0.1 1.1 1 0 0 1 1 1 0 SUKH-3 immunity protein DUF5408 PF17402.2 NODE_68812_length_230_cov_1.794872_g60871_i0reverse_frame_1 - 0.17 11.8 4.0 0.1 12.5 2.1 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5408) zf-C2H2_12 PF18658.1 NODE_68802_length_230_cov_1.938462_g60861_i0reverse_frame_1 - 0.065 12.8 0.2 0.093 12.3 0.2 1.3 1 0 0 1 1 1 0 Zinc-finger C2H2-type Aminotran_1_2 PF00155.21 NODE_68793_length_230_cov_2.020513_g60852_i0forward_frame_1 - 4.4e-08 32.7 0.0 4.4e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PGM1_C PF18105.1 NODE_68793_length_230_cov_2.020513_g60852_i0forward_frame_1 - 0.025 14.1 0.0 0.032 13.7 0.0 1.3 1 1 0 1 1 1 0 PGM1 C-terminal domain APC_u5 PF16630.5 NODE_68790_length_230_cov_2.046154_g60849_i0forward_frame_1 - 0.014 16.5 0.0 0.016 16.2 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on APC between 1st and 2nd catenin-bdg motifs ArgJ PF01960.18 NODE_68789_length_230_cov_2.051282_g60848_i0reverse_frame_1 - 6.6e-11 41.6 0.0 7e-11 41.5 0.0 1.0 1 0 0 1 1 1 1 ArgJ family SMC_hinge PF06470.13 NODE_68789_length_230_cov_2.051282_g60848_i0forward_frame_1 - 0.064 13.6 0.0 0.069 13.4 0.0 1.1 1 0 0 1 1 1 0 SMC proteins Flexible Hinge Domain Abhydrolase_3 PF07859.13 NODE_68781_length_230_cov_2.220513_g60840_i0reverse_frame_1 - 7.1e-05 22.8 0.1 9.5e-05 22.4 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold WD40 PF00400.32 NODE_68767_length_230_cov_2.487179_g60826_i0forward_frame_1 - 0.0017 19.1 0.0 0.005 17.7 0.0 1.7 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_68767_length_230_cov_2.487179_g60826_i0forward_frame_1 - 0.029 14.7 0.0 0.035 14.4 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 NODE_68767_length_230_cov_2.487179_g60826_i0forward_frame_1 - 0.14 11.1 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein MORN PF02493.20 NODE_68758_length_230_cov_2.733333_g60817_i0forward_frame_1 - 8.2e-13 47.4 12.2 3.3e-07 29.8 1.3 3.5 4 0 0 4 4 4 3 MORN repeat DHBP_synthase PF00926.19 NODE_68755_length_230_cov_2.820513_g60814_i0forward_frame_1 - 4e-30 104.8 0.1 4.2e-30 104.7 0.1 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase USP7_ICP0_bdg PF12436.8 NODE_68753_length_230_cov_2.830769_g60812_i0reverse_frame_1 - 0.086 12.1 0.0 0.15 11.3 0.0 1.4 1 1 0 1 1 1 0 ICP0-binding domain of Ubiquitin-specific protease 7 DUF4901 PF16244.5 NODE_68750_length_230_cov_3.041026_g60809_i0forward_frame_1 - 0.1 11.9 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4901) DUF4680 PF15730.5 NODE_68749_length_230_cov_3.169231_g60808_i0forward_frame_1 - 0.18 12.2 2.2 0.2 12.0 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4680) DUF3739 PF12545.8 NODE_68733_length_230_cov_26.994872_g60792_i0reverse_frame_1 - 0.1 13.1 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 Filamentous haemagglutinin family outer membrane protein YMF19 PF02326.15 NODE_68730_length_230_cov_31.928205_g60789_i0forward_frame_1 - 0.41 11.5 12.4 0.46 11.3 12.4 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 Sugar_transport PF06800.12 NODE_68727_length_230_cov_36.107692_g60786_i0reverse_frame_1 - 0.046 13.1 0.1 0.046 13.1 0.1 1.1 1 0 0 1 1 1 0 Sugar transport protein HIM1 PF08732.10 NODE_68725_length_230_cov_39.246154_g60784_i0forward_frame_1 - 0.043 13.3 0.3 0.055 13.0 0.3 1.1 1 0 0 1 1 1 0 HIM1 Proteasome_A_N PF10584.9 NODE_68724_length_230_cov_43.482051_g60783_i0forward_frame_1 - 0.28 10.9 1.2 0.54 10.0 0.0 2.0 2 0 0 2 2 2 0 Proteasome subunit A N-terminal signature DUF3719 PF12516.8 NODE_68720_length_230_cov_48.892308_g60779_i0forward_frame_1 - 0.0006 19.5 0.6 0.00078 19.1 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3719) AP2 PF00847.20 NODE_68720_length_230_cov_48.892308_g60779_i0forward_frame_1 - 0.12 12.6 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 AP2 domain Auxin_repressed PF05564.12 NODE_68718_length_230_cov_50.220513_g60777_i0forward_frame_1 - 0.02 15.5 1.1 0.022 15.4 1.1 1.1 1 0 0 1 1 1 0 Dormancy/auxin associated protein DUF3510 PF12022.8 NODE_68713_length_230_cov_57.138462_g60772_i0reverse_frame_1 - 0.13 12.7 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3510) Sarcolipin PF05366.11 NODE_68706_length_230_cov_62.605128_g60765_i0reverse_frame_1 - 0.13 12.0 1.0 0.18 11.5 1.0 1.2 1 0 0 1 1 1 0 Sarcolipin Pkinase PF00069.25 NODE_68705_length_230_cov_63.000000_g60764_i0reverse_frame_1 - 4.8e-10 39.2 1.3 4.9e-10 39.2 1.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_68705_length_230_cov_63.000000_g60764_i0reverse_frame_1 - 7.9e-08 31.9 0.6 7.9e-08 31.9 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase SCAN PF02023.17 NODE_68704_length_230_cov_63.933333_g60763_i0reverse_frame_1 - 0.0011 18.7 0.5 0.0012 18.6 0.5 1.0 1 0 0 1 1 1 1 SCAN domain NPV_P10 PF05531.12 NODE_68703_length_230_cov_64.600000_g60762_i0reverse_frame_1 - 0.012 16.0 0.1 0.016 15.7 0.1 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ATP_sub_h PF10775.9 NODE_68702_length_230_cov_64.810256_g60761_i0reverse_frame_1 - 0.13 12.3 0.3 0.16 12.0 0.3 1.1 1 0 0 1 1 1 0 ATP synthase complex subunit h UPF0051 PF01458.17 NODE_68700_length_230_cov_70.492308_g60759_i0forward_frame_1 - 0.0084 15.8 0.1 0.0093 15.7 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) DUF1936 PF09151.10 NODE_68694_length_230_cov_77.153846_g60753_i0reverse_frame_1 - 0.49 10.3 3.8 16 5.5 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) S-AdoMet_synt_N PF00438.20 NODE_68692_length_230_cov_78.558974_g60751_i0reverse_frame_1 - 4.2e-29 101.1 0.2 4.8e-29 100.9 0.2 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 NODE_68692_length_230_cov_78.558974_g60751_i0reverse_frame_1 - 0.0046 15.8 0.0 0.0046 15.8 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) Sigma70_ECF PF07638.11 NODE_68688_length_230_cov_89.317949_g60747_i0reverse_frame_1 - 0.044 13.7 2.5 0.053 13.4 2.5 1.1 1 0 0 1 1 1 0 ECF sigma factor Baculo_VP1054 PF05789.11 NODE_68684_length_230_cov_95.235897_g60743_i0forward_frame_1 - 0.06 12.6 0.1 0.06 12.6 0.1 1.1 1 0 0 1 1 1 0 Baculovirus VP1054 protein DUF3847 PF12958.7 NODE_68674_length_230_cov_134.184615_g60733_i0forward_frame_1 - 0.031 14.4 0.0 0.038 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3847) Erg28 PF03694.13 NODE_68667_length_230_cov_422.769231_g60726_i0reverse_frame_1 - 0.018 15.4 1.1 0.021 15.2 1.1 1.1 1 0 0 1 1 1 0 Erg28 like protein DUF1415 PF07209.12 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_1 - 0.0033 17.2 3.7 0.37 10.5 0.3 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1415) DUF3307 PF11750.8 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_1 - 0.076 13.1 0.1 6 7.0 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3307) SH3_16 PF18348.1 NODE_68661_length_230_cov_1230.820513_g60720_i0reverse_frame_1 - 0.15 11.9 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial dipeptidyl-peptidase Sh3 domain S-AdoMet_synt_M PF02772.16 NODE_68661_length_230_cov_1230.820513_g60720_i0forward_frame_1 - 7.7e-06 26.2 0.1 9.6e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain AAA_lid_3 PF17862.1 NODE_68661_length_230_cov_1230.820513_g60720_i0forward_frame_1 - 0.15 11.9 0.3 0.36 10.7 0.0 1.7 2 0 0 2 2 2 0 AAA+ lid domain S-AdoMet_synt_M PF02772.16 NODE_68659_length_230_cov_5646.887179_g60718_i0reverse_frame_1 - 7.7e-06 26.2 0.1 9.6e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain AAA_lid_3 PF17862.1 NODE_68659_length_230_cov_5646.887179_g60718_i0reverse_frame_1 - 0.15 11.9 0.3 0.36 10.7 0.0 1.7 2 0 0 2 2 2 0 AAA+ lid domain Sas6_CC PF18594.1 NODE_68654_length_231_cov_0.816327_g60713_i0forward_frame_1 - 3.5 7.5 7.3 0.83 9.5 3.2 1.9 2 0 0 2 2 2 0 Sas6/XLF/XRCC4 coiled-coil domain DUF1648 PF07853.11 NODE_68651_length_231_cov_0.913265_g60710_i0reverse_frame_1 - 0.11 12.2 0.1 0.17 11.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1648) Toxin_TOLIP PF00087.21 NODE_68649_length_231_cov_0.933673_g60708_i0reverse_frame_1 - 0.0084 16.3 0.2 0.01 16.0 0.2 1.2 1 0 0 1 1 1 1 Snake toxin and toxin-like protein DUF2229 PF09989.9 NODE_68648_length_231_cov_0.959184_g60707_i0reverse_frame_1 - 0.083 12.5 0.0 2.6 7.7 0.0 2.0 1 1 1 2 2 2 0 CoA enzyme activase uncharacterised domain (DUF2229) TT_ORF1 PF02956.14 NODE_68645_length_231_cov_1.020408_g60704_i0reverse_frame_1 - 1.3 7.6 5.5 1.3 7.6 5.5 1.0 1 0 0 1 1 1 0 TT viral orf 1 SR-25 PF10500.9 NODE_68645_length_231_cov_1.020408_g60704_i0forward_frame_1 - 0.096 12.3 2.1 0.095 12.3 2.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein GP41 PF00517.17 NODE_68641_length_231_cov_1.061224_g60700_i0reverse_frame_1 - 0.062 13.2 3.8 0.065 13.1 3.8 1.0 1 0 0 1 1 1 0 Retroviral envelope protein DUF1700 PF08006.11 NODE_68641_length_231_cov_1.061224_g60700_i0reverse_frame_1 - 0.078 12.5 7.8 0.087 12.4 7.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF4349 PF14257.6 NODE_68641_length_231_cov_1.061224_g60700_i0reverse_frame_1 - 0.11 12.0 3.1 0.12 11.8 3.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Shisa PF13908.6 NODE_68641_length_231_cov_1.061224_g60700_i0reverse_frame_1 - 0.11 12.7 0.6 0.13 12.5 0.6 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator UL45 PF05473.12 NODE_68641_length_231_cov_1.061224_g60700_i0reverse_frame_1 - 0.73 9.4 2.2 0.81 9.3 2.2 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF2207 PF09972.9 NODE_68641_length_231_cov_1.061224_g60700_i0reverse_frame_1 - 0.97 8.1 4.2 0.99 8.1 4.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) NMU PF02070.15 NODE_68640_length_231_cov_1.071429_g60699_i0forward_frame_1 - 0.1 12.5 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Neuromedin U DUF1967 PF09269.11 NODE_68631_length_231_cov_1.204082_g60690_i0forward_frame_1 - 0.1 12.6 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) YacG PF03884.14 NODE_68610_length_231_cov_1.311224_g60669_i0reverse_frame_1 - 0.087 12.6 0.4 0.13 12.0 0.4 1.3 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG Tom7 PF08038.12 NODE_68604_length_231_cov_1.341837_g60663_i0reverse_frame_1 - 0.16 11.6 0.1 0.33 10.7 0.1 1.5 1 0 0 1 1 1 0 TOM7 family Ni_hydr_CYTB PF01292.20 NODE_68591_length_231_cov_1.474490_g60650_i0reverse_frame_1 - 0.16 11.6 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 Saf_2TM PF18303.1 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.0058 16.2 0.9 0.006 16.2 0.9 1.0 1 0 0 1 1 1 1 SAVED-fused 2TM effector domain DuoxA PF10204.9 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.023 13.7 0.4 0.023 13.7 0.4 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor MFS_4 PF06779.14 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.027 13.8 0.4 0.03 13.6 0.4 1.0 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB DUF2721 PF11026.8 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.044 13.7 2.1 0.053 13.4 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Cellulose_synt PF03552.14 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.063 11.8 0.7 0.067 11.7 0.7 1.0 1 0 0 1 1 1 0 Cellulose synthase Anoctamin PF04547.12 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.073 11.9 0.4 0.076 11.8 0.4 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel PRA1 PF03208.19 NODE_68585_length_231_cov_1.571429_g60644_i0reverse_frame_1 - 0.072 12.7 0.0 0.084 12.5 0.0 1.1 1 0 0 1 1 1 0 PRA1 family protein Ribosomal_L10 PF00466.20 NODE_68584_length_231_cov_1.581633_g60643_i0reverse_frame_1 - 9e-05 22.5 0.1 0.00013 22.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L10 TonB_dep_Rec PF00593.24 NODE_68568_length_231_cov_1.688776_g60627_i0forward_frame_1 - 0.0056 16.6 0.9 0.0058 16.6 0.9 1.0 1 0 0 1 1 1 1 TonB dependent receptor DUF5544 PF17698.1 NODE_68562_length_231_cov_1.734694_g60621_i0forward_frame_1 - 0.015 15.4 0.9 0.016 15.3 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5544) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks313.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks313.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks313.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks313.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1376 PF07120.11 NODE_68550_length_231_cov_1.933673_g60609_i0reverse_frame_1 - 0.13 12.6 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1376) DDE_Tnp_IS1595 PF12762.7 NODE_68549_length_231_cov_1.933673_g60608_i0reverse_frame_1 - 0.0055 16.7 0.0 0.0063 16.5 0.0 1.1 1 0 0 1 1 1 1 ISXO2-like transposase domain AgrB PF04647.15 NODE_68546_length_231_cov_1.969388_g60605_i0reverse_frame_1 - 0.057 12.7 0.2 0.061 12.6 0.2 1.1 1 0 0 1 1 1 0 Accessory gene regulator B PepSY_2 PF13670.6 NODE_68537_length_231_cov_2.102041_g60596_i0reverse_frame_1 - 0.064 13.3 0.0 0.088 12.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain MarC PF01914.17 NODE_68535_length_231_cov_2.112245_g60594_i0forward_frame_1 - 3.6e-27 95.1 4.7 3.9e-27 95.0 4.7 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DUF2960 PF11173.8 NODE_68530_length_231_cov_2.132653_g60589_i0forward_frame_1 - 1.9 9.0 3.3 6 7.4 0.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF2960) RIIa PF02197.17 NODE_68524_length_231_cov_2.204082_g60583_i0reverse_frame_1 - 0.059 13.0 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit Fijivirus_P9-2 PF06837.11 NODE_68524_length_231_cov_2.204082_g60583_i0forward_frame_1 - 3 7.3 8.7 3.4 7.1 8.7 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein TGS PF02824.21 NODE_68516_length_231_cov_2.275510_g60575_i0forward_frame_1 - 5e-11 42.5 0.0 6.2e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 TGS domain NTP_transf_7 PF07984.12 NODE_68515_length_231_cov_2.316327_g60574_i0reverse_frame_1 - 0.19 10.9 0.0 0.19 10.9 0.0 1.0 1 0 0 1 1 1 0 Nucleotidyltransferase Pkinase PF00069.25 NODE_68512_length_231_cov_2.357143_g60571_i0forward_frame_1 - 0.054 12.8 0.1 0.06 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein kinase domain DUF1661 PF07877.11 NODE_68502_length_231_cov_2.505102_g60561_i0reverse_frame_1 - 0.31 10.8 1.5 0.62 9.8 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1661) DUF2871 PF11070.8 NODE_68496_length_231_cov_2.653061_g60555_i0reverse_frame_1 - 0.05 13.9 0.2 0.056 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2871) Antimicrobial24 PF16049.5 NODE_68492_length_231_cov_2.857143_g60551_i0reverse_frame_1 - 0.067 13.2 0.4 0.11 12.5 0.4 1.3 1 0 0 1 1 1 0 Frog antimicrobial peptide Cas9_b_hairpin PF17893.1 NODE_68491_length_231_cov_2.867347_g60550_i0forward_frame_1 - 0.11 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated endonuclease Cas9 beta-hairpin domain FAST_1 PF06743.15 NODE_68490_length_231_cov_2.918367_g60549_i0forward_frame_1 - 0.082 12.9 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 1 DUF3973 PF13119.6 NODE_68488_length_231_cov_3.000000_g60547_i0forward_frame_1 - 0.086 12.9 0.3 0.17 12.0 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) Rad50_zn_hook PF04423.14 NODE_68486_length_231_cov_3.051020_g60545_i0reverse_frame_1 - 0.048 13.5 0.2 0.069 13.0 0.2 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif RecR PF02132.15 NODE_68486_length_231_cov_3.051020_g60545_i0reverse_frame_1 - 0.13 11.9 0.1 0.17 11.5 0.1 1.2 1 0 0 1 1 1 0 RecR protein DSPc PF00782.20 NODE_68483_length_231_cov_3.061224_g60542_i0forward_frame_1 - 1.2e-18 67.2 0.3 1.3e-18 67.1 0.3 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_68483_length_231_cov_3.061224_g60542_i0forward_frame_1 - 0.0057 16.2 0.0 0.006 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase HTH_IclR PF09339.10 NODE_68476_length_231_cov_4.423469_g60535_i0reverse_frame_1 - 5.2e-05 23.0 0.0 8.3e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain Sde2_N_Ubi PF13019.6 NODE_68476_length_231_cov_4.423469_g60535_i0forward_frame_1 - 0.053 13.4 0.2 0.058 13.2 0.2 1.1 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain DUF834 PF05754.14 NODE_68476_length_231_cov_4.423469_g60535_i0forward_frame_1 - 0.13 12.4 0.2 0.17 11.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF834) Glyco_hydro_42 PF02449.15 NODE_68464_length_231_cov_36.576531_g60523_i0forward_frame_1 - 0.052 12.9 0.1 0.057 12.8 0.1 1.0 1 0 0 1 1 1 0 Beta-galactosidase AhpC-TSA_2 PF13911.6 NODE_68462_length_231_cov_38.438776_g60521_i0reverse_frame_1 - 0.085 13.0 0.0 0.091 12.9 0.0 1.1 1 0 0 1 1 1 0 AhpC/TSA antioxidant enzyme Defensin_like PF10868.8 NODE_68458_length_231_cov_41.678571_g60517_i0reverse_frame_1 - 0.031 15.0 1.8 0.041 14.7 1.8 1.2 1 0 0 1 1 1 0 Cysteine-rich antifungal protein 2, defensin-like zf-C4H2 PF10146.9 NODE_68439_length_231_cov_61.341837_g60498_i0forward_frame_1 - 0.0069 16.7 6.5 0.0074 16.6 6.5 1.0 1 0 0 1 1 1 1 Zinc finger-containing protein Histone_H2A_C PF16211.5 NODE_68435_length_231_cov_66.979592_g60494_i0reverse_frame_1 - 2.5 7.9 5.3 4.6 7.1 5.3 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A DUF3301 PF11743.8 NODE_68435_length_231_cov_66.979592_g60494_i0forward_frame_1 - 0.1 12.3 0.2 0.15 11.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) RisS_PPD PF16524.5 NODE_68418_length_231_cov_196.857143_g60477_i0reverse_frame_1 - 0.11 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Periplasmic domain of Sensor histidine kinase RisS Pkinase PF00069.25 NODE_68418_length_231_cov_196.857143_g60477_i0forward_frame_1 - 2.4e-11 43.5 0.0 2.5e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_68418_length_231_cov_196.857143_g60477_i0forward_frame_1 - 0.00011 21.6 0.0 0.00011 21.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PIF1 PF05970.14 NODE_68418_length_231_cov_196.857143_g60477_i0forward_frame_1 - 0.11 11.6 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 PIF1-like helicase Defb50 PF17546.2 NODE_68409_length_231_cov_884.122449_g60468_i0forward_frame_1 - 0.066 13.1 0.2 8.2 6.4 0.3 2.1 1 1 1 2 2 2 0 Beta defensin 50 Selenoprotein_S PF06936.11 NODE_68407_length_232_cov_0.796954_g60466_i0forward_frame_2 - 0.13 12.0 0.5 0.18 11.6 0.5 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) Mon2_C PF16206.5 NODE_68404_length_232_cov_0.812183_g60463_i0forward_frame_2 - 0.061 11.5 0.1 0.07 11.3 0.1 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein Cation_efflux PF01545.21 NODE_68403_length_232_cov_0.812183_g60462_i0forward_frame_2 - 1.6e-14 54.1 0.2 1.8e-14 54.0 0.2 1.0 1 0 0 1 1 1 1 Cation efflux family Secretin_N_2 PF07655.13 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_2 - 0.13 12.9 9.5 0.14 12.7 9.5 1.1 1 0 0 1 1 1 0 Secretin N-terminal domain ATP-synt_8 PF00895.20 NODE_68393_length_232_cov_0.989848_g60452_i0forward_frame_3 - 9.9 6.7 7.9 10 6.7 6.8 1.6 1 1 1 2 2 2 0 ATP synthase protein 8 Mito_carr PF00153.27 NODE_68391_length_232_cov_1.015228_g60450_i0forward_frame_3 - 1.3e-15 57.0 0.0 1.5e-15 56.9 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF5621 PF18532.1 NODE_68387_length_232_cov_1.106599_g60446_i0reverse_frame_3 - 0.021 14.7 0.2 0.023 14.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5621) DUF1664 PF07889.12 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.013 15.5 2.5 0.018 15.1 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Pox_A11 PF05061.13 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.019 14.3 0.9 0.022 14.1 0.9 1.0 1 0 0 1 1 1 0 Poxvirus A11 Protein XhlA PF10779.9 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.027 14.6 3.6 0.052 13.8 0.7 2.3 1 1 1 2 2 2 0 Haemolysin XhlA DUF2203 PF09969.9 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.046 14.4 0.6 0.054 14.2 0.6 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) ATP-synt_F6 PF05511.11 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.066 13.6 0.2 0.077 13.4 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase coupling factor 6 BLOC1_2 PF10046.9 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.093 13.0 1.0 0.14 12.5 1.0 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DEC-1_N PF04625.13 NODE_68379_length_232_cov_1.177665_g60438_i0forward_frame_3 - 1.2 8.0 6.2 0.97 8.4 6.2 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Calpain_u2 PF16648.5 NODE_68367_length_232_cov_1.218274_g60426_i0forward_frame_2 - 0.17 12.4 0.1 0.26 11.8 0.1 1.3 1 0 0 1 1 1 0 Unstructured region on Calpain-3 GAT PF03127.14 NODE_68365_length_232_cov_1.218274_g60424_i0reverse_frame_2 - 0.045 14.1 1.3 0.11 12.9 0.5 1.7 1 1 1 2 2 2 0 GAT domain Protamine_like PF06382.11 NODE_68359_length_232_cov_1.248731_g60418_i0reverse_frame_2 - 0.14 12.3 0.2 0.15 12.3 0.2 1.1 1 0 0 1 1 1 0 Protamine and protamine like Lipase_2 PF01674.18 NODE_68358_length_232_cov_1.279188_g60417_i0reverse_frame_3 - 0.1 12.1 0.7 0.12 11.9 0.7 1.1 1 0 0 1 1 1 0 Lipase (class 2) FANCI_S1 PF14675.6 NODE_68355_length_232_cov_1.350254_g60414_i0reverse_frame_2 - 0.011 15.3 0.1 0.012 15.2 0.1 1.0 1 0 0 1 1 1 0 FANCI solenoid 1 DUF2718 PF10918.8 NODE_68354_length_232_cov_1.350254_g60413_i0forward_frame_3 - 0.6 10.6 1.8 3.4 8.2 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2718) Protamine_3 PF08188.11 NODE_68352_length_232_cov_1.360406_g60411_i0reverse_frame_2 - 0.057 13.6 1.3 0.079 13.2 1.3 1.2 1 0 0 1 1 1 0 Spermatozal protamine family Zn_ribbon_17 PF17120.5 NODE_68351_length_232_cov_1.360406_g60410_i0forward_frame_3 - 0.71 9.6 4.0 0.84 9.3 3.7 1.4 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type Orf78 PF06024.12 NODE_68346_length_232_cov_1.416244_g60405_i0forward_frame_3 - 0.36 11.2 2.2 0.41 11.0 2.2 1.1 1 0 0 1 1 1 0 Orf78 (ac78) TEP1_N PF05386.11 NODE_68338_length_232_cov_1.522843_g60397_i0forward_frame_2 - 0.14 11.7 0.1 0.22 11.2 0.1 1.3 1 0 0 1 1 1 0 TEP1 N-terminal domain DUF3342 PF11822.8 NODE_68335_length_232_cov_1.538071_g60394_i0reverse_frame_3 - 9.6e-08 32.1 0.0 1.5e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) GTP_EFTU PF00009.27 NODE_68333_length_232_cov_1.553299_g60392_i0forward_frame_2 - 0.026 14.1 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain DUF3641 PF12345.8 NODE_68330_length_232_cov_1.583756_g60389_i0forward_frame_2 - 0.06 13.4 0.0 0.062 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3641) SeqA PF03925.13 NODE_68328_length_232_cov_1.604061_g60387_i0reverse_frame_3 - 0.076 13.0 0.0 0.092 12.7 0.0 1.1 1 0 0 1 1 1 0 SeqA protein C-terminal domain zf-MIZ PF02891.20 NODE_68328_length_232_cov_1.604061_g60387_i0reverse_frame_3 - 0.079 12.7 0.4 0.12 12.1 0.4 1.3 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger Neuraminidase PF18413.1 NODE_68328_length_232_cov_1.604061_g60387_i0reverse_frame_2 - 0.05 13.3 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 Neuraminidase-like domain APOBEC4 PF18775.1 NODE_68320_length_232_cov_1.624365_g60379_i0forward_frame_2 - 0.032 14.4 0.4 0.042 14.0 0.4 1.3 1 1 0 1 1 1 0 APOBEC4 Pox_I6 PF04595.13 NODE_68319_length_232_cov_1.624365_g60378_i0reverse_frame_3 - 0.15 11.0 0.1 0.19 10.7 0.1 1.0 1 0 0 1 1 1 0 Poxvirus I6-like family Homoserine_dh PF00742.19 NODE_68318_length_232_cov_1.634518_g60377_i0forward_frame_2 - 0.13 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Homoserine dehydrogenase MerE PF05052.12 NODE_68316_length_232_cov_1.654822_g60375_i0reverse_frame_3 - 0.13 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 MerE protein Usher_TcfC PF17271.2 NODE_68316_length_232_cov_1.654822_g60375_i0forward_frame_2 - 0.14 10.9 0.0 0.17 10.7 0.0 1.0 1 0 0 1 1 1 0 TcfC Usher-like barrel domain Myosin_head PF00063.21 NODE_68314_length_232_cov_1.664975_g60373_i0forward_frame_2 - 0.097 10.9 0.0 0.1 10.8 0.0 1.1 1 0 0 1 1 1 0 Myosin head (motor domain) TMIE PF16038.5 NODE_68312_length_232_cov_1.680203_g60371_i0forward_frame_3 - 0.094 12.6 0.3 0.13 12.2 0.3 1.3 1 0 0 1 1 1 0 TMIE protein COX7C PF02935.16 NODE_68311_length_232_cov_1.685279_g60370_i0forward_frame_2 - 0.09 13.0 1.5 0.12 12.6 1.5 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc EF-hand_6 PF13405.6 NODE_68309_length_232_cov_1.695431_g60368_i0forward_frame_3 - 0.0068 16.3 0.8 0.016 15.1 0.1 1.9 1 1 1 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 NODE_68309_length_232_cov_1.695431_g60368_i0forward_frame_3 - 0.013 15.3 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 NODE_68309_length_232_cov_1.695431_g60368_i0forward_frame_3 - 0.066 12.8 0.3 0.13 11.8 0.2 1.6 1 1 0 1 1 1 0 EF hand Flp_N PF03930.14 NODE_68307_length_232_cov_1.705584_g60366_i0reverse_frame_3 - 0.0083 16.1 0.5 0.012 15.5 0.5 1.2 1 0 0 1 1 1 1 Recombinase Flp protein N-terminus Rtf2 PF04641.12 NODE_68306_length_232_cov_1.720812_g60365_i0reverse_frame_3 - 0.033 13.5 0.2 0.035 13.5 0.2 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger Ribosomal_L11 PF00298.19 NODE_68306_length_232_cov_1.720812_g60365_i0reverse_frame_3 - 0.084 13.4 0.4 0.11 13.1 0.4 1.2 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain DUF3149 PF11346.8 NODE_68305_length_232_cov_1.725888_g60364_i0reverse_frame_2 - 0.14 11.8 4.2 0.21 11.2 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) MUG113 PF13455.6 NODE_68303_length_232_cov_1.776650_g60362_i0forward_frame_2 - 0.0024 18.5 0.1 0.0038 17.9 0.1 1.3 1 0 0 1 1 1 1 Meiotically up-regulated gene 113 T5orf172 PF10544.9 NODE_68303_length_232_cov_1.776650_g60362_i0forward_frame_2 - 0.0094 16.5 0.2 0.016 15.8 0.2 1.4 1 0 0 1 1 1 1 T5orf172 domain Cellulase PF00150.18 NODE_68302_length_232_cov_1.781726_g60361_i0forward_frame_2 - 0.23 10.9 0.0 0.23 10.9 0.0 1.1 1 0 0 1 1 1 0 Cellulase (glycosyl hydrolase family 5) Defensin_3 PF08131.11 NODE_68295_length_232_cov_1.822335_g60354_i0forward_frame_3 - 0.018 15.2 0.3 0.029 14.6 0.3 1.4 1 0 0 1 1 1 0 Defensin-like peptide family DUF4462 PF14692.6 NODE_68291_length_232_cov_1.873096_g60350_i0forward_frame_2 - 0.17 11.4 0.6 3.5 7.2 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4462) Bacteriocin_IIi PF11758.8 NODE_68290_length_232_cov_1.873096_g60349_i0reverse_frame_3 - 0.2 11.5 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 Aureocin-like type II bacteriocin MSP1a PF11670.8 NODE_68281_length_232_cov_2.065990_g60340_i0reverse_frame_3 - 0.3 10.4 4.5 0.36 10.1 4.5 1.2 1 1 0 1 1 1 0 Major surface protein 1a (MSP1a) DUF5360 PF17314.2 NODE_68280_length_232_cov_2.071066_g60339_i0reverse_frame_3 - 0.0095 16.0 1.4 0.0099 15.9 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5360) AA_permease_N PF08403.10 NODE_68280_length_232_cov_2.071066_g60339_i0forward_frame_2 - 0.085 12.4 0.1 0.085 12.4 0.1 1.3 2 0 0 2 2 2 0 Amino acid permease N-terminal V-set PF07686.17 NODE_68280_length_232_cov_2.071066_g60339_i0forward_frame_2 - 0.2 11.8 0.1 0.2 11.8 0.1 1.6 1 1 1 2 2 2 0 Immunoglobulin V-set domain FtsK_4TM PF13491.6 NODE_68279_length_232_cov_2.091371_g60338_i0forward_frame_3 - 0.067 12.9 0.1 3.7 7.2 0.0 2.0 1 1 1 2 2 2 0 4TM region of DNA translocase FtsK/SpoIIIE DUF2799 PF10973.8 NODE_68276_length_232_cov_2.192893_g60335_i0reverse_frame_3 - 2.1e-13 50.5 0.3 2.3e-13 50.3 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2799) DUF1240 PF06836.12 NODE_68276_length_232_cov_2.192893_g60335_i0forward_frame_3 - 0.00092 19.7 0.8 0.001 19.6 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1240) MOR2-PAG1_N PF14222.6 NODE_68273_length_232_cov_2.269036_g60332_i0reverse_frame_3 - 0.0093 15.0 0.0 0.0093 15.0 0.0 1.0 1 0 0 1 1 1 1 Cell morphogenesis N-terminal HEAT PF02985.22 NODE_68273_length_232_cov_2.269036_g60332_i0reverse_frame_3 - 0.016 15.4 0.0 0.033 14.4 0.0 1.6 1 0 0 1 1 1 0 HEAT repeat Arm PF00514.23 NODE_68273_length_232_cov_2.269036_g60332_i0reverse_frame_3 - 0.052 13.6 0.1 0.17 11.9 0.0 1.8 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat MbeB_N PF04837.12 NODE_68271_length_232_cov_2.294416_g60330_i0reverse_frame_2 - 0.083 13.2 0.4 0.1 12.9 0.4 1.2 1 0 0 1 1 1 0 MbeB-like, N-term conserved region Osw5 PF17062.5 NODE_68269_length_232_cov_2.324873_g60328_i0reverse_frame_3 - 0.018 15.1 2.5 0.025 14.7 2.5 1.3 1 0 0 1 1 1 0 Outer spore wall 5 Gp5_C PF06715.12 NODE_68267_length_232_cov_2.345178_g60326_i0reverse_frame_3 - 0.049 13.8 1.4 0.23 11.6 0.4 2.4 1 1 1 2 2 2 0 Gp5 C-terminal repeat (3 copies) F420_oxidored PF03807.17 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.00027 21.4 0.2 0.00039 20.9 0.2 1.2 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.24 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.00047 20.6 0.1 0.00054 20.4 0.1 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain K_oxygenase PF13434.6 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.024 13.8 0.0 0.026 13.7 0.0 1.0 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) GFO_IDH_MocA PF01408.22 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.03 15.2 0.1 0.036 14.9 0.1 1.1 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.037 13.4 0.0 0.037 13.4 0.0 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.038 13.2 0.0 0.038 13.2 0.0 1.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.052 12.8 0.0 0.053 12.8 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Ldh_1_N PF00056.23 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.066 13.3 0.1 0.085 12.9 0.1 1.2 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain CoA_binding PF02629.19 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.091 13.4 0.1 0.11 13.2 0.1 1.1 1 0 0 1 1 1 0 CoA binding domain FMO-like PF00743.19 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.17 10.2 0.0 0.19 10.1 0.0 1.0 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Sacchrp_dh_NADP PF03435.18 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.18 12.1 0.1 0.21 11.9 0.1 1.1 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ABC_tran PF00005.27 NODE_68259_length_232_cov_2.517766_g60318_i0reverse_frame_2 - 0.0012 19.4 0.0 0.0018 18.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_13 PF13166.6 NODE_68259_length_232_cov_2.517766_g60318_i0reverse_frame_2 - 0.038 12.6 0.1 0.042 12.5 0.1 1.0 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 NODE_68259_length_232_cov_2.517766_g60318_i0reverse_frame_2 - 0.086 12.2 0.3 0.095 12.1 0.3 1.1 1 0 0 1 1 1 0 Bacterial TniB protein ADK PF00406.22 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 1.7e-31 109.4 0.2 1.8e-31 109.2 0.2 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 1.6e-18 67.4 0.3 1.7e-18 67.3 0.3 1.0 1 0 0 1 1 1 1 AAA domain Hydin_ADK PF17213.3 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.00071 19.9 0.6 0.036 14.4 0.0 2.0 1 1 1 2 2 2 1 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.012 15.8 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.025 15.1 0.0 0.028 14.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.046 13.4 0.1 0.066 12.9 0.1 1.4 1 1 0 1 1 1 0 Cytidylate kinase Thymidylate_kin PF02223.17 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.047 13.4 0.0 0.058 13.1 0.0 1.1 1 0 0 1 1 1 0 Thymidylate kinase ATP-grasp_6 PF18419.1 NODE_68254_length_232_cov_2.644670_g60313_i0forward_frame_2 - 0.11 12.2 0.3 0.19 11.4 0.1 1.5 2 0 0 2 2 2 0 ATP-grasp-like domain SIKE PF05769.11 NODE_68253_length_232_cov_2.659898_g60312_i0reverse_frame_2 - 0.003 17.5 0.6 0.0045 16.9 0.6 1.3 1 0 0 1 1 1 1 SIKE family DUF3906 PF13046.6 NODE_68251_length_232_cov_2.680203_g60310_i0reverse_frame_2 - 0.13 12.4 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3906) DuoxA PF10204.9 NODE_68249_length_232_cov_2.766497_g60308_i0forward_frame_2 - 0.012 14.6 1.6 0.014 14.4 1.6 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor NYD-SP12_N PF15015.6 NODE_68245_length_232_cov_2.868020_g60304_i0reverse_frame_3 - 0.13 10.6 0.0 0.13 10.6 0.0 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated, N-terminal DicB PF05358.11 NODE_68243_length_232_cov_3.187817_g60302_i0forward_frame_2 - 0.058 13.6 0.1 0.069 13.3 0.1 1.2 1 0 0 1 1 1 0 DicB protein Peptidase_M56 PF05569.11 NODE_68242_length_232_cov_3.218274_g60301_i0reverse_frame_2 - 0.11 11.7 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 Carla_C4 PF01623.17 NODE_68240_length_232_cov_3.228426_g60299_i0reverse_frame_3 - 0.098 12.6 3.9 0.11 12.5 3.9 1.2 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein SVWC PF15430.6 NODE_68239_length_232_cov_3.370558_g60298_i0forward_frame_2 - 4.4 7.6 8.6 4.9 7.5 1.5 2.4 1 1 1 2 2 2 0 Single domain von Willebrand factor type C cEGF PF12662.7 NODE_68232_length_232_cov_3.741117_g60291_i0forward_frame_2 - 0.039 13.9 1.4 0.054 13.4 1.4 1.3 1 0 0 1 1 1 0 Complement Clr-like EGF-like TssO PF17561.2 NODE_68230_length_232_cov_3.939086_g60289_i0reverse_frame_3 - 0.032 14.3 0.9 0.045 13.8 0.9 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO DUF4083 PF13314.6 NODE_68230_length_232_cov_3.939086_g60289_i0reverse_frame_2 - 0.058 13.3 0.8 0.099 12.6 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) CAF20 PF17052.5 NODE_68229_length_232_cov_4.106599_g60288_i0reverse_frame_2 - 0.016 15.4 1.4 0.016 15.3 1.4 1.2 1 0 0 1 1 1 0 Cap associated factor Jagunal PF07086.12 NODE_68229_length_232_cov_4.106599_g60288_i0forward_frame_3 - 0.0093 16.1 0.1 0.0095 16.0 0.1 1.1 1 0 0 1 1 1 1 Jagunal, ER re-organisation during oogenesis PCDO_beta_N PF12391.8 NODE_68227_length_232_cov_4.664975_g60286_i0reverse_frame_3 - 0.013 15.1 0.8 1.6 8.4 0.1 2.3 2 0 0 2 2 2 0 Protocatechuate 3,4-dioxygenase beta subunit N terminal Ycf15 PF10705.9 NODE_68226_length_232_cov_4.700508_g60285_i0reverse_frame_3 - 0.13 12.5 0.0 0.14 12.4 0.0 1.3 1 1 0 1 1 1 0 Chloroplast protein precursor Ycf15 putative CLP_protease PF00574.23 NODE_68226_length_232_cov_4.700508_g60285_i0forward_frame_3 - 8.7e-06 25.7 0.0 1.1e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Clp protease MSA-2c PF12238.8 NODE_68225_length_232_cov_6.000000_g60284_i0reverse_frame_3 - 8.6 6.3 5.8 9.9 6.1 5.8 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Adeno_shaft PF00608.17 NODE_68223_length_232_cov_12.700508_g60282_i0forward_frame_2 - 0.16 11.8 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 Adenoviral fibre protein (repeat/shaft region) BCCT PF02028.17 NODE_68222_length_232_cov_13.908629_g60281_i0forward_frame_2 - 0.013 13.9 3.6 0.015 13.8 3.6 1.0 1 0 0 1 1 1 0 BCCT, betaine/carnitine/choline family transporter Med19 PF10278.9 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_3 - 1.2 9.0 23.2 1.2 9.0 23.2 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 CCDC106 PF15794.5 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_3 - 3 7.5 19.3 3.5 7.3 19.3 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 GAGA_bind PF06217.12 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_3 - 3.3 7.9 15.4 3.4 7.9 15.4 1.0 1 0 0 1 1 1 0 GAGA binding protein-like family RNA_polI_A34 PF08208.11 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_3 - 3.4 7.7 30.8 3.6 7.6 30.8 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF5553 PF17707.1 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_2 - 2 7.8 5.5 2 7.8 5.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5553) DUF2633 PF11119.8 NODE_68219_length_232_cov_24.197970_g60278_i0reverse_frame_2 - 8 6.4 8.9 2 8.4 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2633) AC_N PF16214.5 NODE_68216_length_232_cov_30.502538_g60275_i0forward_frame_3 - 0.14 11.3 0.1 0.16 11.1 0.1 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Dimerisation PF08100.11 NODE_68215_length_232_cov_32.969543_g60274_i0reverse_frame_2 - 0.025 14.6 0.0 0.034 14.2 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain zf-CGNR PF11706.8 NODE_68213_length_232_cov_39.492386_g60272_i0reverse_frame_2 - 0.023 14.5 0.1 0.033 14.0 0.1 1.2 1 0 0 1 1 1 0 CGNR zinc finger STAG PF08514.11 NODE_68211_length_232_cov_41.680203_g60270_i0reverse_frame_3 - 0.021 14.7 2.0 0.026 14.4 2.0 1.1 1 0 0 1 1 1 0 STAG domain CC2-LZ PF16516.5 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.00028 21.2 3.7 0.00036 20.8 3.7 1.1 1 0 0 1 1 1 1 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator V-SNARE PF05008.15 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.0019 18.5 2.7 0.0028 18.0 2.7 1.3 1 1 0 1 1 1 1 Vesicle transport v-SNARE protein N-terminus PKcGMP_CC PF16808.5 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.0022 17.8 0.6 0.0045 16.8 0.6 1.5 1 0 0 1 1 1 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Atg14 PF10186.9 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.042 12.9 3.7 0.046 12.8 3.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LcrG PF07216.12 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.071 13.0 0.2 0.098 12.6 0.2 1.2 1 0 0 1 1 1 0 LcrG protein NYD-SP28 PF14772.6 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.082 13.0 5.7 0.094 12.8 5.2 1.5 1 1 0 1 1 1 0 Sperm tail UPF0242 PF06785.11 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.14 12.3 4.0 0.18 11.9 4.0 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CagD PF16567.5 NODE_68205_length_232_cov_51.583756_g60264_i0reverse_frame_2 - 0.04 13.7 0.1 0.045 13.5 0.1 1.1 1 0 0 1 1 1 0 Pathogenicity island component CagD DUF3267 PF11667.8 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 0.028 14.7 10.2 0.034 14.4 10.2 1.0 1 0 0 1 1 1 0 Putative zincin peptidase DUF5383 PF17355.2 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 0.035 14.5 0.1 0.043 14.2 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Orf78 PF06024.12 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 0.036 14.3 3.3 0.036 14.3 3.3 1.4 1 1 0 1 1 1 0 Orf78 (ac78) SPC25 PF06703.11 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 0.18 11.6 3.8 0.19 11.5 3.8 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF3488 PF11992.8 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 2.5 7.0 8.6 2.8 6.8 8.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DHHC PF01529.20 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 3.1 7.9 11.8 3.8 7.6 11.8 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF5445 PF17520.2 NODE_68201_length_232_cov_55.583756_g60260_i0forward_frame_3 - 0.0088 15.9 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5445) BAMBI PF06211.12 NODE_68200_length_232_cov_55.873096_g60259_i0reverse_frame_2 - 0.033 14.4 0.7 0.038 14.2 0.7 1.1 1 0 0 1 1 1 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain AAA_7 PF12775.7 NODE_68197_length_232_cov_59.705584_g60256_i0forward_frame_3 - 8.6e-16 58.0 0.9 9.2e-16 57.9 0.9 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_22 PF13401.6 NODE_68197_length_232_cov_59.705584_g60256_i0forward_frame_3 - 0.032 14.5 0.1 0.032 14.5 0.1 1.0 1 0 0 1 1 1 0 AAA domain NLRC4_HD PF17889.1 NODE_68197_length_232_cov_59.705584_g60256_i0forward_frame_2 - 0.092 13.1 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 NLRC4 helical domain ETRAMP PF09716.10 NODE_68196_length_232_cov_63.060914_g60255_i0forward_frame_3 - 0.72 10.0 2.2 0.84 9.7 2.2 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) WWE PF02825.20 NODE_68195_length_232_cov_63.162437_g60254_i0reverse_frame_3 - 1.4e-06 28.8 0.3 1.6e-06 28.6 0.3 1.1 1 0 0 1 1 1 1 WWE domain Glyco_trans_4_5 PF16994.5 NODE_68190_length_232_cov_71.862944_g60249_i0reverse_frame_3 - 0.11 12.0 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl-transferase family 4 Laminin_B PF00052.18 NODE_68188_length_232_cov_75.091371_g60247_i0forward_frame_3 - 0.13 12.1 0.0 0.21 11.5 0.0 1.4 1 1 0 1 1 1 0 Laminin B (Domain IV) FliM PF02154.15 NODE_68187_length_232_cov_76.258883_g60246_i0forward_frame_2 - 0.026 14.4 0.1 0.029 14.3 0.1 1.0 1 0 0 1 1 1 0 Flagellar motor switch protein FliM DUF1828 PF08861.10 NODE_68185_length_232_cov_84.426396_g60244_i0reverse_frame_3 - 0.12 12.6 2.0 0.45 10.8 2.0 1.8 1 1 0 1 1 1 0 Domain of unknown function DUF1828 DUF4776 PF16003.5 NODE_68185_length_232_cov_84.426396_g60244_i0reverse_frame_3 - 0.34 9.9 11.1 0.38 9.7 11.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4776) VF530 PF09905.9 NODE_68184_length_232_cov_84.969543_g60243_i0forward_frame_3 - 0.076 13.2 0.4 0.1 12.8 0.4 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 DUF4938 PF16292.5 NODE_68181_length_232_cov_93.796954_g60240_i0forward_frame_3 - 0.0098 15.2 0.0 0.011 15.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4938) LIM PF00412.22 NODE_68178_length_232_cov_96.786802_g60237_i0forward_frame_3 - 0.07 13.4 0.6 0.094 13.0 0.6 1.2 1 0 0 1 1 1 0 LIM domain TIMELESS PF04821.14 NODE_68177_length_232_cov_98.878173_g60236_i0forward_frame_2 - 0.12 11.6 1.1 0.13 11.6 1.1 1.1 1 0 0 1 1 1 0 Timeless protein Antimicrobial25 PF16839.5 NODE_68176_length_232_cov_102.807107_g60235_i0reverse_frame_2 - 0.027 14.5 0.1 0.041 14.0 0.1 1.3 1 0 0 1 1 1 0 Nematode antimicrobial peptide DUF543 PF04418.12 NODE_68175_length_232_cov_109.096447_g60234_i0reverse_frame_3 - 0.23 11.5 1.3 2.1 8.4 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF543) Dynein_light PF01221.18 NODE_68171_length_232_cov_131.984772_g60230_i0forward_frame_3 - 0.014 15.7 0.1 0.018 15.4 0.1 1.2 1 0 0 1 1 1 0 Dynein light chain type 1 RRP14 PF15459.6 NODE_68168_length_232_cov_230.365482_g60227_i0reverse_frame_2 - 0.0034 18.0 0.2 0.0041 17.7 0.2 1.1 1 0 0 1 1 1 1 60S ribosome biogenesis protein Rrp14 cNMP_binding PF00027.29 NODE_68163_length_233_cov_0.797980_g60222_i0forward_frame_2 - 3.5e-07 30.2 0.0 3.8e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain PAC4 PF16093.5 NODE_68158_length_233_cov_0.808081_g60217_i0reverse_frame_3 - 0.084 13.1 0.0 0.095 12.9 0.0 1.2 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 FixP_N PF14715.6 NODE_68156_length_233_cov_0.868687_g60215_i0forward_frame_2 - 0.055 13.2 0.2 0.1 12.3 0.2 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP YjcZ_2 PF09680.10 NODE_68156_length_233_cov_0.868687_g60215_i0forward_frame_2 - 8.5 6.1 13.7 8.5 6.1 4.2 2.3 2 0 0 2 2 2 0 Family of unknown function FlaC_arch PF05377.11 NODE_68152_length_233_cov_1.010101_g60211_i0reverse_frame_3 - 0.0047 17.3 0.7 0.0047 17.3 0.7 1.8 2 0 0 2 2 2 1 Flagella accessory protein C (FlaC) Hemocyanin_M PF00372.19 NODE_68152_length_233_cov_1.010101_g60211_i0reverse_frame_3 - 0.11 11.7 0.1 0.11 11.6 0.1 1.0 1 0 0 1 1 1 0 Hemocyanin, copper containing domain SNARE PF05739.19 NODE_68152_length_233_cov_1.010101_g60211_i0reverse_frame_3 - 0.12 12.4 1.0 0.2 11.7 1.0 1.4 1 0 0 1 1 1 0 SNARE domain bZIP_1 PF00170.21 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.0086 16.2 0.1 0.024 14.8 0.0 1.7 1 1 0 1 1 1 1 bZIP transcription factor FlaC_arch PF05377.11 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.036 14.5 0.1 0.11 12.9 0.0 1.7 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) LPP PF04728.13 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.038 14.4 0.2 1.8 9.0 0.1 2.1 1 1 1 2 2 2 0 Lipoprotein leucine-zipper Prefoldin_2 PF01920.20 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.053 13.5 0.0 0.067 13.1 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit Pox_A_type_inc PF04508.12 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.091 12.7 1.4 40 4.3 0.1 3.2 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat AIP3 PF03915.13 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.14 11.2 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 Actin interacting protein 3 Tektin PF03148.14 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.18 10.5 0.2 0.2 10.4 0.2 1.0 1 0 0 1 1 1 0 Tektin family Prefoldin PF02996.17 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.2 11.6 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit HALZ PF02183.18 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.3 11.3 2.9 4.1 7.7 0.2 2.6 2 1 1 3 3 3 0 Homeobox associated leucine zipper zf-SAP30 PF13866.6 NODE_68148_length_233_cov_1.070707_g60207_i0reverse_frame_2 - 0.037 14.1 0.4 0.037 14.1 0.4 2.0 2 1 0 2 2 2 0 SAP30 zinc-finger # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks314.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks314.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks314.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks314.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5439 PF17507.2 NODE_68147_length_233_cov_1.090909_g60206_i0reverse_frame_2 - 0.0043 17.2 0.2 0.0051 17.0 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5439) DUF1690 PF07956.11 NODE_68147_length_233_cov_1.090909_g60206_i0forward_frame_3 - 0.2 12.0 0.1 0.31 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF3947 PF13135.6 NODE_68146_length_233_cov_1.106061_g60205_i0forward_frame_2 - 0.0018 18.4 0.1 0.0022 18.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3947) DUF72 PF01904.18 NODE_68144_length_233_cov_1.131313_g60203_i0forward_frame_3 - 0.095 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF72 FMO-like PF00743.19 NODE_68142_length_233_cov_1.166667_g60201_i0forward_frame_3 - 1.9e-06 26.6 0.3 1.9e-06 26.6 0.3 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like K_oxygenase PF13434.6 NODE_68142_length_233_cov_1.166667_g60201_i0forward_frame_3 - 0.013 14.6 0.4 0.014 14.6 0.4 1.0 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) Lamprin PF06403.11 NODE_68139_length_233_cov_1.202020_g60198_i0forward_frame_2 - 0.0045 16.9 0.2 0.0045 16.9 0.2 1.1 1 0 0 1 1 1 1 Lamprin DUF5549 PF17703.1 NODE_68135_length_233_cov_1.207071_g60194_i0reverse_frame_3 - 7.3 6.2 8.9 7.8 6.1 8.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5549) PGM_PMM_IV PF00408.20 NODE_68129_length_233_cov_1.212121_g60188_i0reverse_frame_2 - 0.014 15.6 0.0 0.019 15.1 0.0 1.2 1 1 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPV_E5 PF08135.11 NODE_68126_length_233_cov_1.212121_g60185_i0reverse_frame_2 - 0.11 12.9 3.2 0.11 12.9 3.2 2.8 2 1 1 3 3 3 0 Major transforming protein E5 family DUF2701 PF10857.8 NODE_68126_length_233_cov_1.212121_g60185_i0reverse_frame_2 - 0.16 12.0 0.7 0.16 12.0 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2701) Peptidase_M41 PF01434.18 NODE_68121_length_233_cov_1.227273_g60180_i0forward_frame_3 - 6.9e-05 22.8 0.0 6.9e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M41 Peptidase_M41 PF01434.18 NODE_68121_length_233_cov_1.227273_g60180_i0forward_frame_2 - 0.00076 19.4 0.3 0.00094 19.1 0.0 1.3 2 0 0 2 2 2 1 Peptidase family M41 TM1506 PF08973.10 NODE_68119_length_233_cov_1.242424_g60178_i0reverse_frame_3 - 0.21 11.2 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1893) DUF4824 PF16106.5 NODE_68114_length_233_cov_1.328283_g60173_i0reverse_frame_3 - 0.17 11.2 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4824) Varsurf_PPLC PF03490.13 NODE_68112_length_233_cov_1.348485_g60171_i0reverse_frame_2 - 0.072 13.1 0.2 0.089 12.8 0.2 1.3 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C zf-RING_2 PF13639.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 2.9e-13 49.9 2.1 3.9e-13 49.5 2.1 1.1 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.4e-09 38.1 1.6 1.8e-09 37.8 1.6 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.9e-09 37.2 1.4 2.4e-09 36.9 1.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 8.5e-09 35.0 1.0 1.5e-08 34.2 1.0 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 2.2e-08 33.8 1.3 3.2e-08 33.3 1.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 6.3e-08 32.5 1.3 8.4e-08 32.1 1.3 1.1 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.3e-07 31.3 1.1 1.8e-07 30.9 1.1 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 2.7e-07 30.3 1.2 3.5e-07 30.0 1.2 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.1e-06 28.5 1.8 1.6e-06 28.0 0.7 1.7 1 1 1 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.2e-06 28.4 0.4 1.5e-06 28.2 0.4 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 2.7e-05 23.7 1.6 3.9e-05 23.2 1.6 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_4 PF14570.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.00032 20.4 1.7 0.00047 19.9 1.7 1.3 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain RINGv PF12906.7 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.0015 18.6 2.7 0.0028 17.8 2.7 1.5 1 1 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.0029 17.7 6.0 0.11 12.6 6.0 2.4 1 1 0 1 1 1 1 FANCL C-terminal domain zf-Nse PF11789.8 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.0079 16.0 1.0 0.01 15.7 1.0 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-C2HC_2 PF13913.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.034 14.0 1.1 0.069 13.1 1.1 1.5 1 0 0 1 1 1 0 zinc-finger of a C2HC-type zf-UDP PF14569.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.045 13.9 0.4 0.062 13.4 0.4 1.2 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-RING_6 PF14835.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.053 13.4 0.7 0.073 13.0 0.7 1.3 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING-like PF08746.11 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.053 13.8 3.6 0.078 13.3 3.6 1.4 1 1 0 1 1 1 0 RING-like domain zf-C3HC4_4 PF15227.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.076 13.2 3.1 0.13 12.4 3.1 1.5 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3H2C3 PF17122.5 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.13 12.3 4.0 0.42 10.7 4.0 1.9 1 1 0 1 1 1 0 Zinc-finger Rad50_zn_hook PF04423.14 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.14 12.1 0.1 0.2 11.5 0.1 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif HPIP PF15226.6 NODE_68110_length_233_cov_1.353535_g60169_i0forward_frame_2 - 0.1 13.0 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family DUF2613 PF11021.8 NODE_68109_length_233_cov_1.358586_g60168_i0reverse_frame_3 - 2 8.6 10.4 3.7 7.7 10.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) HIT PF01230.23 NODE_68109_length_233_cov_1.358586_g60168_i0forward_frame_3 - 0.018 15.8 0.3 0.024 15.4 0.3 1.1 1 0 0 1 1 1 0 HIT domain Spt20 PF12090.8 NODE_68109_length_233_cov_1.358586_g60168_i0forward_frame_3 - 0.96 9.0 15.2 0.99 9.0 15.2 1.1 1 0 0 1 1 1 0 Spt20 family Roughex PF06020.11 NODE_68109_length_233_cov_1.358586_g60168_i0forward_frame_3 - 4.2 6.4 5.8 4.1 6.4 5.8 1.0 1 0 0 1 1 1 0 Drosophila roughex protein NO_synthase PF02898.15 NODE_68106_length_233_cov_1.363636_g60165_i0forward_frame_2 - 0.14 11.2 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 Nitric oxide synthase, oxygenase domain Tudor_3 PF18115.1 NODE_68105_length_233_cov_1.383838_g60164_i0forward_frame_3 - 0.11 12.3 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 DNA repair protein Crb2 Tudor domain DASH_Ask1 PF08655.10 NODE_68101_length_233_cov_1.404040_g60160_i0reverse_frame_3 - 0.046 13.6 0.7 0.29 11.0 0.2 2.0 2 0 0 2 2 2 0 DASH complex subunit Ask1 DUF3687 PF12459.8 NODE_68100_length_233_cov_1.414141_g60159_i0reverse_frame_2 - 5.9 6.5 9.2 0.26 10.8 1.8 2.1 1 1 1 2 2 2 0 D-Ala-teichoic acid biosynthesis protein DUF4256 PF14066.6 NODE_68099_length_233_cov_1.424242_g60158_i0reverse_frame_2 - 0.069 12.8 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) HoxA13_N PF12284.8 NODE_68097_length_233_cov_1.449495_g60156_i0reverse_frame_3 - 0.027 15.1 0.1 0.028 15.0 0.1 1.1 1 0 0 1 1 1 0 Hox protein A13 N terminal DUF645 PF04875.12 NODE_68093_length_233_cov_1.525253_g60152_i0reverse_frame_3 - 0.1 12.6 2.6 0.092 12.8 1.2 1.6 1 1 1 2 2 2 0 Protein of unknown function, DUF645 Pyr_redox_2 PF07992.14 NODE_68091_length_233_cov_1.535354_g60150_i0reverse_frame_2 - 0.0033 16.7 0.0 0.0034 16.7 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase IMPa_helical PF18642.1 NODE_68091_length_233_cov_1.535354_g60150_i0reverse_frame_2 - 0.078 13.4 0.0 0.086 13.3 0.0 1.1 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain Herpes_glycop PF01528.16 NODE_68087_length_233_cov_1.550505_g60146_i0reverse_frame_2 - 0.0015 17.4 0.2 0.0016 17.4 0.2 1.1 1 0 0 1 1 1 1 Herpesvirus glycoprotein M BTB PF00651.31 NODE_68087_length_233_cov_1.550505_g60146_i0forward_frame_3 - 5.5e-07 29.8 0.2 6.4e-07 29.6 0.2 1.2 1 0 0 1 1 1 1 BTB/POZ domain Glyc_hyd_38C_2 PF18230.1 NODE_68081_length_233_cov_1.606061_g60140_i0reverse_frame_3 - 0.11 12.6 0.2 0.15 12.2 0.1 1.3 1 1 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal sub-domain NUSAP PF16006.5 NODE_68081_length_233_cov_1.606061_g60140_i0reverse_frame_3 - 0.12 12.1 0.5 0.14 11.9 0.5 1.0 1 0 0 1 1 1 0 Nucleolar and spindle-associated protein WD40 PF00400.32 NODE_68080_length_233_cov_1.611111_g60139_i0reverse_frame_2 - 2.6e-05 24.9 0.4 7.7e-05 23.4 0.1 1.8 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_68080_length_233_cov_1.611111_g60139_i0reverse_frame_2 - 0.0034 17.7 0.1 0.0037 17.5 0.1 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Nucleoporin_N PF08801.11 NODE_68080_length_233_cov_1.611111_g60139_i0reverse_frame_2 - 0.014 14.2 0.1 0.014 14.2 0.1 1.0 1 0 0 1 1 1 0 Nup133 N terminal like U62_UL91 PF17442.2 NODE_68079_length_233_cov_1.611111_g60138_i0forward_frame_3 - 0.11 12.5 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins SipA PF09052.10 NODE_68076_length_233_cov_1.626263_g60135_i0reverse_frame_2 - 0.096 12.3 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 SipA N-terminal domain LRR_6 PF13516.6 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 4.2e-06 26.4 5.4 0.61 10.3 0.0 3.3 3 0 0 3 3 3 3 Leucine Rich repeat LRR_8 PF13855.6 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 7.8e-05 22.4 5.8 0.095 12.5 1.2 3.0 1 1 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 0.00062 20.1 5.9 0.11 13.0 1.2 2.8 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 0.0016 18.7 4.4 5.4 8.0 1.2 3.2 2 1 0 2 2 2 2 Leucine Rich Repeat LRR_9 PF14580.6 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 0.071 12.6 0.0 3.2 7.2 0.0 2.0 1 1 1 2 2 2 0 Leucine-rich repeat Kringle PF00051.18 NODE_68075_length_233_cov_1.626263_g60134_i0forward_frame_2 - 0.013 15.8 0.2 0.015 15.6 0.2 1.2 1 0 0 1 1 1 0 Kringle domain C6 PF01681.17 NODE_68075_length_233_cov_1.626263_g60134_i0forward_frame_2 - 0.029 14.9 0.6 0.032 14.7 0.6 1.1 1 0 0 1 1 1 0 C6 domain Gemini_mov PF01708.16 NODE_68073_length_233_cov_1.656566_g60132_i0forward_frame_3 - 0.32 10.8 5.6 0.53 10.1 5.6 1.4 1 0 0 1 1 1 0 Geminivirus putative movement protein Endothelin PF00322.17 NODE_68071_length_233_cov_1.671717_g60130_i0reverse_frame_2 - 0.086 12.5 2.2 0.16 11.6 2.2 1.4 1 0 0 1 1 1 0 Endothelin family Colicin_im PF03857.13 NODE_68070_length_233_cov_1.676768_g60129_i0forward_frame_2 - 0.021 14.8 2.2 0.044 13.8 2.2 1.5 1 1 0 1 1 1 0 Colicin immunity protein Allene_ox_cyc PF06351.11 NODE_68066_length_233_cov_1.732323_g60125_i0forward_frame_3 - 0.18 11.6 1.6 3.3 7.4 0.1 2.0 1 1 1 2 2 2 0 Allene oxide cyclase Sugar_tr PF00083.24 NODE_68058_length_233_cov_1.797980_g60117_i0reverse_frame_3 - 0.03 13.2 0.1 0.036 12.9 0.1 1.2 1 0 0 1 1 1 0 Sugar (and other) transporter WRW PF10206.9 NODE_68055_length_233_cov_1.843434_g60114_i0reverse_frame_2 - 0.035 14.5 1.6 0.038 14.4 1.6 1.1 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f ACOX PF01756.19 NODE_68053_length_233_cov_1.883838_g60112_i0reverse_frame_2 - 0.00032 20.3 0.0 0.00034 20.2 0.0 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase TH1 PF04858.13 NODE_68053_length_233_cov_1.883838_g60112_i0forward_frame_3 - 0.052 12.2 0.0 0.052 12.2 0.0 1.1 1 0 0 1 1 1 0 TH1 protein DUF5097 PF17020.5 NODE_68053_length_233_cov_1.883838_g60112_i0forward_frame_2 - 0.066 13.6 1.4 0.075 13.4 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5097) NAD_binding_2 PF03446.15 NODE_68047_length_233_cov_1.974747_g60106_i0reverse_frame_3 - 0.0071 16.5 0.0 0.0076 16.4 0.0 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase DUF3482 PF11981.8 NODE_68043_length_233_cov_2.035354_g60102_i0reverse_frame_3 - 0.029 13.8 0.3 0.035 13.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Radial_spoke_3 PF06098.11 NODE_68043_length_233_cov_2.035354_g60102_i0reverse_frame_3 - 0.38 10.0 6.7 0.43 9.8 6.7 1.0 1 0 0 1 1 1 0 Radial spoke protein 3 RNA_pol_N PF01194.17 NODE_68042_length_233_cov_2.121212_g60101_i0reverse_frame_2 - 0.084 13.2 1.3 0.084 13.2 1.3 2.4 2 1 0 2 2 2 0 RNA polymerases N / 8 kDa subunit zf-BED PF02892.15 NODE_68042_length_233_cov_2.121212_g60101_i0reverse_frame_2 - 0.85 9.7 6.6 9.1 6.4 1.8 2.3 2 0 0 2 2 2 0 BED zinc finger RNA_binding PF01877.17 NODE_68040_length_233_cov_2.171717_g60099_i0reverse_frame_3 - 0.035 14.4 0.2 0.039 14.2 0.2 1.2 1 0 0 1 1 1 0 RNA binding NOA36 PF06524.12 NODE_68036_length_233_cov_2.217172_g60095_i0forward_frame_3 - 0.011 15.1 0.2 0.012 14.9 0.2 1.1 1 0 0 1 1 1 0 NOA36 protein SPATA24 PF15175.6 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.0023 17.8 2.9 0.0024 17.8 2.9 1.1 1 0 0 1 1 1 1 Spermatogenesis-associated protein 24 CC2-LZ PF16516.5 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.011 16.1 2.6 0.014 15.8 2.6 1.2 1 0 0 1 1 1 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator PKcGMP_CC PF16808.5 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.013 15.4 5.0 0.058 13.2 5.0 2.3 1 1 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase SF-assemblin PF06705.11 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.013 14.9 6.2 0.022 14.1 6.2 1.3 1 1 0 1 1 1 0 SF-assemblin/beta giardin bZIP_1 PF00170.21 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.023 14.8 0.9 0.023 14.8 0.9 2.3 1 1 1 2 2 2 0 bZIP transcription factor TSC22 PF01166.18 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.025 14.9 0.5 0.044 14.1 0.5 1.5 1 0 0 1 1 1 0 TSC-22/dip/bun family DUF641 PF04859.12 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.026 14.8 1.8 0.033 14.5 1.8 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Shugoshin_N PF07558.11 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.036 13.9 1.5 1.3 9.0 0.1 3.0 2 1 1 3 3 3 0 Shugoshin N-terminal coiled-coil region XhlA PF10779.9 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.12 12.6 4.2 0.22 11.7 4.2 1.6 1 1 0 1 1 1 0 Haemolysin XhlA IMD PF08397.11 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.18 11.2 4.9 0.21 10.9 4.9 1.0 1 0 0 1 1 1 0 IRSp53/MIM homology domain Tho2 PF11262.8 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.5 9.5 5.4 0.51 9.5 5.4 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 TMPIT PF07851.13 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 1 8.5 3.0 1.1 8.5 3.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein FlaC_arch PF05377.11 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 1.2 9.6 6.7 4.7 7.7 1.2 2.5 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) zf-UBP PF02148.19 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 2.3e-19 69.5 10.3 2.8e-19 69.2 10.3 1.1 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein zinc_ribbon_9 PF14369.6 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 0.0092 16.2 1.2 0.0092 16.2 1.2 3.3 2 1 2 4 4 4 1 zinc-ribbon zf-UBP_var PF17807.1 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 0.017 14.8 1.3 0.032 14.0 1.3 1.6 1 1 0 1 1 1 0 Variant UBP zinc finger zf-HIT PF04438.16 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 0.079 12.8 1.2 0.079 12.8 1.2 1.9 2 0 0 2 2 2 0 HIT zinc finger zf-B_box PF00643.24 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 0.26 11.5 12.7 0.74 10.0 6.3 2.3 1 1 1 2 2 2 0 B-box zinc finger CBP_BcsO PF17037.5 NODE_68027_length_233_cov_2.323232_g60086_i0reverse_frame_3 - 0.12 12.5 0.1 0.14 12.3 0.1 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsO Peptidase_C2 PF00648.21 NODE_68026_length_233_cov_2.333333_g60085_i0reverse_frame_3 - 1.3e-15 57.2 1.2 1.4e-15 57.1 1.2 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease rve PF00665.26 NODE_68022_length_233_cov_2.419192_g60081_i0forward_frame_2 - 0.00094 19.4 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 Integrase core domain Peptidase_S78_2 PF14550.6 NODE_68022_length_233_cov_2.419192_g60081_i0forward_frame_2 - 0.012 15.7 0.0 0.014 15.5 0.0 1.0 1 0 0 1 1 1 0 Putative phage serine protease XkdF HTH_ABP1_N PF18107.1 NODE_68020_length_233_cov_2.479798_g60079_i0forward_frame_2 - 0.024 14.3 0.0 0.034 13.8 0.0 1.2 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain TraT PF05818.12 NODE_68016_length_233_cov_2.535354_g60075_i0reverse_frame_2 - 0.31 10.7 2.1 0.36 10.5 2.1 1.0 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein DnaJ PF00226.31 NODE_68014_length_233_cov_2.565657_g60073_i0reverse_frame_3 - 0.00026 21.0 0.0 0.00036 20.6 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain VARLMGL PF14383.6 NODE_68014_length_233_cov_2.565657_g60073_i0reverse_frame_2 - 0.074 12.6 0.1 0.15 11.6 0.1 1.6 1 0 0 1 1 1 0 DUF761-associated sequence motif T5orf172 PF10544.9 NODE_68013_length_233_cov_2.570707_g60072_i0reverse_frame_2 - 0.047 14.2 0.0 0.056 14.0 0.0 1.2 1 0 0 1 1 1 0 T5orf172 domain DBD_Tnp_Mut PF03108.15 NODE_68013_length_233_cov_2.570707_g60072_i0reverse_frame_2 - 0.049 13.6 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 MuDR family transposase DXP_synthase_N PF13292.6 NODE_68013_length_233_cov_2.570707_g60072_i0reverse_frame_2 - 0.076 12.2 0.6 0.082 12.1 0.6 1.0 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Lact-deh-memb PF09330.11 NODE_68012_length_233_cov_2.580808_g60071_i0reverse_frame_3 - 3e-24 85.9 0.0 3.2e-24 85.8 0.0 1.0 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding ApoC-I PF04691.12 NODE_68012_length_233_cov_2.580808_g60071_i0reverse_frame_3 - 0.13 12.2 0.0 0.22 11.5 0.0 1.4 2 0 0 2 2 2 0 Apolipoprotein C-I (ApoC-1) HAD_SAK_1 PF10307.9 NODE_68012_length_233_cov_2.580808_g60071_i0forward_frame_2 - 0.14 11.9 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins Herpes_BBRF1 PF04793.12 NODE_68010_length_233_cov_2.585859_g60069_i0forward_frame_2 - 0.021 13.9 0.3 0.021 13.9 0.3 1.0 1 0 0 1 1 1 0 BRRF1-like protein Mannitol_dh_C PF08125.13 NODE_68009_length_233_cov_2.585859_g60068_i0reverse_frame_3 - 1.2e-38 133.0 0.0 1.3e-38 132.9 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain FixO PF02433.15 NODE_68008_length_233_cov_2.616162_g60067_i0forward_frame_2 - 0.076 12.4 0.0 0.083 12.3 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO p47_phox_C PF08944.11 NODE_68004_length_233_cov_2.702020_g60063_i0forward_frame_3 - 3.5e-05 23.1 2.0 8.8e-05 21.8 2.0 1.7 1 0 0 1 1 1 1 NADPH oxidase subunit p47Phox, C terminal domain RELT PF12606.8 NODE_68002_length_233_cov_2.742424_g60061_i0reverse_frame_3 - 0.25 10.3 1.4 0.37 9.8 1.4 1.2 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Lipid_bd PF12888.7 NODE_67997_length_233_cov_3.055556_g60056_i0reverse_frame_3 - 0.2 12.1 0.0 3.5 8.1 0.0 2.0 1 1 1 2 2 2 0 Lipid-binding putative hydrolase DUF3975 PF13126.6 NODE_67995_length_233_cov_3.323232_g60054_i0forward_frame_3 - 0.59 10.6 5.9 6.2 7.3 5.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3975) EssA PF10661.9 NODE_67994_length_233_cov_3.348485_g60053_i0reverse_frame_2 - 0.16 11.8 4.8 0.16 11.8 3.8 1.4 1 1 1 2 2 2 0 WXG100 protein secretion system (Wss), protein EssA DUF2207 PF09972.9 NODE_67992_length_233_cov_3.818182_g60051_i0forward_frame_2 - 0.024 13.4 0.0 0.024 13.4 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) UCH PF00443.29 NODE_67991_length_233_cov_4.272727_g60050_i0reverse_frame_3 - 0.016 14.7 0.0 0.017 14.6 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase DUF723 PF05265.13 NODE_67987_length_233_cov_7.929293_g60046_i0reverse_frame_3 - 0.27 11.2 4.8 0.23 11.4 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF723) DHHC PF01529.20 NODE_67986_length_233_cov_12.318182_g60045_i0forward_frame_3 - 1.2 9.3 11.0 1.9 8.6 11.0 1.4 1 1 0 1 1 1 0 DHHC palmitoyltransferase DDE_Tnp_ISAZ013 PF07592.11 NODE_67981_length_233_cov_26.772727_g60040_i0reverse_frame_3 - 0.031 13.3 3.9 0.037 13.0 3.9 1.0 1 0 0 1 1 1 0 Rhodopirellula transposase DDE domain Gsf2 PF11055.8 NODE_67973_length_233_cov_35.585859_g60032_i0reverse_frame_2 - 0.12 11.1 0.1 0.12 11.1 0.1 1.2 1 0 0 1 1 1 0 Glucose signalling factor 2 ClpS PF02617.17 NODE_67972_length_233_cov_35.808081_g60031_i0reverse_frame_2 - 0.086 12.6 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 ATP-dependent Clp protease adaptor protein ClpS Ribosomal_L23eN PF03939.13 NODE_67972_length_233_cov_35.808081_g60031_i0forward_frame_2 - 0.0046 17.1 0.1 0.0049 17.0 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L23, N-terminal domain Herpes_U15 PF05613.11 NODE_67968_length_233_cov_43.565657_g60027_i0reverse_frame_2 - 0.038 14.7 0.3 0.04 14.6 0.3 1.1 1 0 0 1 1 1 0 Human herpesvirus U15 protein ResB PF05140.14 NODE_67968_length_233_cov_43.565657_g60027_i0forward_frame_3 - 3.9 6.1 4.5 3.7 6.2 0.7 1.9 1 1 1 2 2 2 0 ResB-like family Rer1 PF03248.13 NODE_67966_length_233_cov_49.782828_g60025_i0reverse_frame_2 - 0.019 14.7 1.2 0.019 14.7 1.2 1.1 1 0 0 1 1 1 0 Rer1 family Hydrolase_3 PF08282.12 NODE_67959_length_233_cov_58.752525_g60018_i0forward_frame_2 - 2.3e-07 30.8 0.0 3.3e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF3029 PF11230.8 NODE_67959_length_233_cov_58.752525_g60018_i0forward_frame_2 - 0.05 12.0 0.0 0.055 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3029) NTP_transf_3 PF12804.7 NODE_67959_length_233_cov_58.752525_g60018_i0forward_frame_2 - 0.063 13.6 0.0 0.065 13.6 0.0 1.1 1 0 0 1 1 1 0 MobA-like NTP transferase domain Adipogenin PF15202.6 NODE_67950_length_233_cov_69.136364_g60009_i0forward_frame_3 - 0.032 14.3 0.2 0.051 13.6 0.2 1.3 1 0 0 1 1 1 0 Adipogenin Sigma_reg_N PF13800.6 NODE_67950_length_233_cov_69.136364_g60009_i0forward_frame_2 - 0.33 11.2 4.6 0.49 10.7 0.3 2.1 2 0 0 2 2 2 0 Sigma factor regulator N-terminal HopW1-1 PF15457.6 NODE_67946_length_233_cov_74.909091_g60005_i0reverse_frame_3 - 0.086 12.1 0.0 0.098 11.9 0.0 1.1 1 0 0 1 1 1 0 Type III T3SS secreted effector HopW1-1/HopPmaA HalOD1 PF18545.1 NODE_67945_length_233_cov_75.787879_g60004_i0reverse_frame_3 - 0.038 14.3 0.0 0.051 13.8 0.0 1.1 1 0 0 1 1 1 0 Halobacterial output domain 1 YoeB_toxin PF06769.14 NODE_67945_length_233_cov_75.787879_g60004_i0forward_frame_2 - 0.018 15.0 0.0 0.023 14.7 0.0 1.1 1 0 0 1 1 1 0 YoeB-like toxin of bacterial type II toxin-antitoxin system Sushi_2 PF09014.10 NODE_67944_length_233_cov_78.934343_g60003_i0forward_frame_2 - 0.12 12.3 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain Sec62 PF03839.16 NODE_67943_length_233_cov_81.146465_g60002_i0forward_frame_2 - 6 6.3 10.2 6.8 6.1 10.2 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Aminotran_3 PF00202.21 NODE_67942_length_233_cov_83.439394_g60001_i0forward_frame_2 - 0.044 12.4 0.0 0.051 12.2 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class-III CSN7a_helixI PF18392.1 NODE_67941_length_233_cov_83.767677_g60000_i0reverse_frame_3 - 0.42 10.5 2.9 0.59 10.1 2.9 1.2 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain DBD_Tnp_Mut PF03108.15 NODE_67939_length_233_cov_94.767677_g59998_i0forward_frame_2 - 0.2 11.7 1.9 0.25 11.4 1.9 1.1 1 0 0 1 1 1 0 MuDR family transposase DUF3128 PF11326.8 NODE_67938_length_233_cov_96.797980_g59997_i0reverse_frame_3 - 0.09 13.2 0.2 0.11 12.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3128) DUF2098 PF09871.9 NODE_67938_length_233_cov_96.797980_g59997_i0reverse_frame_2 - 0.066 13.6 0.3 0.091 13.1 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) UL2 PF08196.11 NODE_67934_length_233_cov_126.702020_g59993_i0reverse_frame_3 - 0.16 11.9 0.1 0.27 11.2 0.1 1.2 1 0 0 1 1 1 0 UL2 protein Ank_4 PF13637.6 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 7.7e-15 55.1 0.1 3.4e-09 37.0 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 6.2e-14 52.4 0.1 9.7e-14 51.7 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 1.9e-11 43.1 0.0 0.00055 20.2 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 7.2e-08 32.6 0.2 0.0011 19.3 0.0 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 2e-07 31.2 0.1 0.00015 22.0 0.0 2.6 3 0 0 3 3 3 2 Ankyrin repeat Thioredoxin_2 PF13098.6 NODE_67924_length_233_cov_288.873737_g59983_i0forward_frame_2 - 0.071 13.6 0.0 0.087 13.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Cys_rich_CPXG PF14255.6 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_3 - 1.8 8.5 5.2 4.6 7.2 0.2 2.5 3 0 0 3 3 3 0 Cysteine-rich CPXCG Ank_2 PF12796.7 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 5.5e-17 62.1 0.0 5.8e-17 62.1 0.0 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 7.7e-13 47.4 0.0 7.8e-06 25.9 0.0 2.3 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 7.5e-12 45.1 0.1 5.2e-05 23.5 0.0 2.4 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 2.1e-10 40.6 0.0 0.00025 21.3 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 2.2e-10 40.9 0.0 0.00041 20.9 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_14 PF03421.16 NODE_67921_length_233_cov_801.005051_g59980_i0reverse_frame_3 - 0.11 12.5 0.3 0.1 12.6 0.3 1.3 1 1 0 1 1 1 0 YopJ Serine/Threonine acetyltransferase DUF3482 PF11981.8 NODE_67915_length_233_cov_28215.984848_g59974_i0forward_frame_3 - 0.048 13.1 8.7 0.059 12.8 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Hit1_C PF18268.1 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_3 - 0.019 15.1 0.0 0.02 15.0 0.0 1.2 1 0 0 1 1 1 0 Hit1 C-terminal Phasin PF05597.11 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_3 - 0.043 13.8 1.5 0.046 13.7 1.5 1.0 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF728 PF05304.12 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_3 - 0.12 12.2 2.2 0.1 12.4 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF728) DDE_Tnp_1_2 PF13586.6 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_2 - 0.017 15.5 1.0 0.02 15.2 1.0 1.1 1 0 0 1 1 1 0 Transposase DDE domain AP_endonuc_2 PF01261.24 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_2 - 0.14 11.5 0.3 0.17 11.3 0.3 1.1 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel MadM PF03818.13 NODE_67902_length_234_cov_1.110553_g59961_i0forward_frame_3 - 0.15 12.0 0.1 0.25 11.2 0.1 1.3 1 0 0 1 1 1 0 Malonate/sodium symporter MadM subunit DUF4217 PF13959.6 NODE_67901_length_234_cov_1.135678_g59960_i0reverse_frame_2 - 5.8e-18 64.9 0.1 7e-18 64.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) DUF4116 PF13475.6 NODE_67899_length_234_cov_1.165829_g59958_i0reverse_frame_3 - 0.21 11.3 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) DUF4733 PF15878.5 NODE_67899_length_234_cov_1.165829_g59958_i0forward_frame_2 - 0.026 15.0 0.0 0.027 14.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4733) PRIMA1 PF16101.5 NODE_67895_length_234_cov_1.175879_g59954_i0reverse_frame_2 - 9.3 6.3 10.1 11 6.1 10.1 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 MetJ PF01340.20 NODE_67894_length_234_cov_1.190955_g59953_i0reverse_frame_3 - 0.068 13.2 0.0 0.083 12.9 0.0 1.1 1 0 0 1 1 1 0 Met Apo-repressor, MetJ DUF1281_C PF18406.1 NODE_67894_length_234_cov_1.190955_g59953_i0reverse_frame_3 - 0.095 12.4 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein LRR_4 PF12799.7 NODE_67893_length_234_cov_1.195980_g59952_i0forward_frame_3 - 9.8e-05 22.6 0.0 0.088 13.3 0.0 2.2 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_67893_length_234_cov_1.195980_g59952_i0forward_frame_3 - 0.00058 20.1 0.2 0.15 12.7 0.1 2.6 2 1 0 2 2 2 2 Leucine Rich Repeat GARS_A PF01071.19 NODE_67892_length_234_cov_1.201005_g59951_i0forward_frame_2 - 1.1e-17 64.4 0.0 1.2e-17 64.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SH3BGR PF04908.15 NODE_67890_length_234_cov_1.201005_g59949_i0forward_frame_3 - 0.069 13.3 0.1 0.074 13.2 0.1 1.1 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein Perm-CXXC PF15629.6 NODE_67888_length_234_cov_1.206030_g59947_i0forward_frame_3 - 0.03 14.6 1.8 0.045 14.0 1.8 1.3 1 0 0 1 1 1 0 Permuted single zf-CXXC unit MCM_OB PF17207.3 NODE_67885_length_234_cov_1.206030_g59944_i0reverse_frame_2 - 7.9e-26 90.4 1.2 8.5e-26 90.3 1.2 1.0 1 0 0 1 1 1 1 MCM OB domain Synaptobrevin PF00957.21 NODE_67875_length_234_cov_1.276382_g59934_i0forward_frame_3 - 0.59 10.0 4.6 0.85 9.5 4.6 1.3 1 0 0 1 1 1 0 Synaptobrevin UPF0242 PF06785.11 NODE_67874_length_234_cov_1.281407_g59933_i0reverse_frame_3 - 0.062 13.4 2.1 0.063 13.4 2.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5409 PF17421.2 NODE_67868_length_234_cov_1.341709_g59927_i0reverse_frame_2 - 0.035 14.8 0.1 0.042 14.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Ubiquitin_4 PF18036.1 NODE_67867_length_234_cov_1.346734_g59926_i0forward_frame_3 - 0.045 13.8 0.4 0.046 13.8 0.4 1.2 1 0 0 1 1 1 0 Ubiquitin-like domain MipZ PF09140.11 NODE_67867_length_234_cov_1.346734_g59926_i0forward_frame_2 - 0.061 12.6 0.1 0.066 12.5 0.1 1.0 1 0 0 1 1 1 0 ATPase MipZ SAB PF04382.13 NODE_67867_length_234_cov_1.346734_g59926_i0forward_frame_2 - 0.1 12.7 0.1 0.18 11.9 0.1 1.5 1 1 0 1 1 1 0 SAB domain PknG_TPR PF16918.5 NODE_67867_length_234_cov_1.346734_g59926_i0forward_frame_2 - 0.16 10.7 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat RapA_C PF12137.8 NODE_67865_length_234_cov_1.371859_g59924_i0forward_frame_2 - 0.018 14.0 0.8 0.02 13.9 0.8 1.0 1 0 0 1 1 1 0 RNA polymerase recycling family C-terminal Peptidase_S11 PF00768.20 NODE_67864_length_234_cov_1.386935_g59923_i0forward_frame_2 - 3.5e-10 39.7 0.1 4.5e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase US30 PF17624.2 NODE_67862_length_234_cov_1.396985_g59921_i0forward_frame_2 - 0.11 11.6 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function PHM7_cyt PF14703.6 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 5.4e-06 26.8 0.3 6.5e-06 26.5 0.3 1.0 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter RRM_1 PF00076.22 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 0.0057 16.4 0.1 0.0071 16.1 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 0.0092 16.0 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 Limkain b1 SET_assoc PF11767.8 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 0.056 13.1 0.1 0.072 12.7 0.1 1.4 1 1 0 1 1 1 0 Histone lysine methyltransferase SET associated LEA_4 PF02987.16 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 0.078 13.1 2.7 0.19 11.9 1.3 2.2 2 1 0 2 2 2 0 Late embryogenesis abundant protein UvrD_C PF13361.6 NODE_67850_length_234_cov_1.472362_g59909_i0reverse_frame_2 - 0.047 13.1 0.1 0.047 13.1 0.1 1.0 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain Rap_GAP PF02145.15 NODE_67850_length_234_cov_1.472362_g59909_i0reverse_frame_2 - 0.076 12.6 0.1 0.083 12.4 0.1 1.0 1 0 0 1 1 1 0 Rap/ran-GAP DUF3989 PF13150.6 NODE_67850_length_234_cov_1.472362_g59909_i0forward_frame_3 - 0.073 12.8 0.5 0.12 12.1 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) DUF5090 PF17009.5 NODE_67850_length_234_cov_1.472362_g59909_i0forward_frame_2 - 0.13 12.2 5.3 0.15 12.0 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Porin_10 PF14121.6 NODE_67848_length_234_cov_1.492462_g59907_i0forward_frame_2 - 0.036 12.6 0.1 0.039 12.5 0.1 1.1 1 0 0 1 1 1 0 Putative porin Pkinase PF00069.25 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 1.3e-23 83.7 0.1 1.4e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 3.1e-13 49.6 0.0 3.6e-13 49.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 0.00012 20.9 0.3 0.00017 20.5 0.3 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 0.054 12.8 0.0 0.079 12.3 0.0 1.2 1 1 0 1 1 1 0 Kinase-like Kdo PF06293.14 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 0.07 12.5 0.2 0.087 12.2 0.2 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family L_biotic_typeA PF04604.13 NODE_67836_length_234_cov_1.587940_g59895_i0reverse_frame_3 - 0.14 12.0 0.2 0.22 11.4 0.2 1.3 1 0 0 1 1 1 0 Type-A lantibiotic Radial_spoke PF04712.12 NODE_67836_length_234_cov_1.587940_g59895_i0forward_frame_2 - 0.021 13.8 0.0 0.022 13.7 0.0 1.1 1 0 0 1 1 1 0 Radial spokehead-like protein Abhydrolase_8 PF06259.12 NODE_67834_length_234_cov_1.603015_g59893_i0forward_frame_2 - 0.01 15.5 0.2 0.011 15.3 0.2 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase ecTbetaR2 PF08917.10 NODE_67832_length_234_cov_1.603015_g59891_i0reverse_frame_3 - 0.021 14.8 0.9 0.033 14.1 0.9 1.5 1 1 0 1 1 1 0 Transforming growth factor beta receptor 2 ectodomain Ketoacyl-synt_2 PF13723.6 NODE_67826_length_234_cov_1.638191_g59885_i0forward_frame_3 - 0.011 15.4 0.1 0.012 15.3 0.1 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain MFS_1 PF07690.16 NODE_67825_length_234_cov_1.648241_g59884_i0reverse_frame_2 - 0.00071 18.6 0.0 0.00075 18.5 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily RTA1 PF04479.13 NODE_67822_length_234_cov_1.673367_g59881_i0forward_frame_2 - 0.0035 17.0 0.1 0.0036 16.9 0.1 1.0 1 0 0 1 1 1 1 RTA1 like protein Sigma_reg_N PF13800.6 NODE_67822_length_234_cov_1.673367_g59881_i0forward_frame_2 - 0.25 11.6 1.3 0.36 11.1 1.3 1.3 1 0 0 1 1 1 0 Sigma factor regulator N-terminal Nodulin_late PF07127.11 NODE_67822_length_234_cov_1.673367_g59881_i0forward_frame_2 - 0.58 10.5 3.6 0.78 10.1 3.6 1.2 1 0 0 1 1 1 0 Late nodulin protein DUF3035 PF11233.8 NODE_67821_length_234_cov_1.688442_g59880_i0reverse_frame_2 - 0.027 14.7 4.0 0.033 14.5 4.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) ABC_tran PF00005.27 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 7.6e-13 49.2 0.1 8.3e-13 49.0 0.1 1.0 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.00021 21.2 0.1 0.00022 21.2 0.1 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.00026 21.6 0.1 0.00026 21.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.0017 18.8 0.1 0.0017 18.8 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.0022 18.0 0.1 0.0026 17.8 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.0062 16.3 0.1 0.0085 15.8 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.013 15.3 0.3 0.013 15.3 0.3 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.017 13.8 0.0 0.019 13.6 0.0 1.0 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.018 15.0 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain MobB PF03205.14 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.027 14.3 0.1 0.032 14.1 0.1 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_21 PF13304.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.03 14.1 0.4 0.03 14.1 0.4 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.042 13.5 0.0 0.042 13.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.052 13.1 0.1 0.06 12.9 0.1 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.085 12.4 0.3 0.13 11.8 0.3 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B cobW PF02492.19 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.086 12.4 0.1 0.09 12.4 0.1 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.22 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.088 12.0 0.1 0.099 11.8 0.1 1.2 1 1 0 1 1 1 0 NB-ARC domain AAA_22 PF13401.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.1 12.8 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.13 11.5 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin T2SSE PF00437.20 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.16 11.0 0.2 0.17 10.9 0.2 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein TsaE PF02367.17 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.17 11.9 0.2 0.21 11.6 0.2 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_35 PF14516.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.21 10.4 0.0 0.21 10.4 0.0 1.0 1 0 0 1 1 1 0 AAA-like domain dNK PF01712.19 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.28 11.0 0.6 0.39 10.5 0.6 1.2 1 0 0 1 1 1 0 Deoxynucleoside kinase Rz1 PF06085.11 NODE_67817_length_234_cov_1.753769_g59876_i0reverse_frame_2 - 0.038 13.7 2.0 0.079 12.7 0.0 2.0 2 0 0 2 2 2 0 Lipoprotein Rz1 precursor L27_1 PF09058.10 NODE_67817_length_234_cov_1.753769_g59876_i0reverse_frame_2 - 0.049 13.6 0.1 0.064 13.3 0.1 1.2 1 0 0 1 1 1 0 L27_1 DuoxA PF10204.9 NODE_67811_length_234_cov_1.804020_g59870_i0reverse_frame_3 - 0.16 11.0 2.6 0.16 10.9 2.6 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks315.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks315.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks315.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks315.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- L27_1 PF09058.10 NODE_67809_length_234_cov_1.829146_g59868_i0reverse_frame_3 - 0.025 14.6 0.1 0.033 14.2 0.1 1.3 1 0 0 1 1 1 0 L27_1 Ank_5 PF13857.6 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 7.9e-11 42.0 0.4 2.3e-05 24.6 0.0 2.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 1.9e-09 38.0 0.0 4.5e-09 36.8 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 3.5e-09 36.2 0.2 0.00066 19.9 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 2.1e-08 34.6 0.1 3.2e-05 24.4 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 7.6e-08 32.5 0.3 0.013 15.9 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat DUF3700 PF12481.8 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 0.13 11.7 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 Aluminium induced protein Amelogenin PF02948.15 NODE_67803_length_234_cov_1.884422_g59862_i0reverse_frame_3 - 0.017 15.8 4.4 0.018 15.7 4.4 1.1 1 0 0 1 1 1 0 Amelogenin Collagen PF01391.18 NODE_67803_length_234_cov_1.884422_g59862_i0forward_frame_3 - 0.015 15.0 7.3 0.021 14.6 7.3 1.2 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) Collagen PF01391.18 NODE_67803_length_234_cov_1.884422_g59862_i0forward_frame_2 - 0.0028 17.4 0.6 0.0052 16.5 0.6 1.3 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) DUF2800 PF10926.8 NODE_67799_length_234_cov_1.929648_g59858_i0reverse_frame_3 - 0.15 11.3 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2800) NQRA_SLBB PF11973.8 NODE_67799_length_234_cov_1.929648_g59858_i0reverse_frame_2 - 0.19 12.4 0.0 0.25 12.0 0.0 1.1 1 0 0 1 1 1 0 NQRA C-terminal domain PID PF00640.23 NODE_67798_length_234_cov_1.959799_g59857_i0reverse_frame_3 - 0.089 12.8 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) MSV199 PF10553.9 NODE_67793_length_234_cov_2.000000_g59852_i0reverse_frame_3 - 0.04 14.2 0.7 0.052 13.8 0.7 1.3 1 1 0 1 1 1 0 MSV199 domain Myb_DNA-bind_7 PF15963.5 NODE_67793_length_234_cov_2.000000_g59852_i0reverse_frame_3 - 0.049 13.5 0.1 0.054 13.4 0.1 1.0 1 0 0 1 1 1 0 Myb DNA-binding like Myb_DNA-bind_6 PF13921.6 NODE_67793_length_234_cov_2.000000_g59852_i0reverse_frame_3 - 0.078 13.2 0.0 0.096 13.0 0.0 1.3 1 1 0 1 1 1 0 Myb-like DNA-binding domain DUF5313 PF17240.2 NODE_67789_length_234_cov_2.050251_g59848_i0forward_frame_3 - 0.22 12.0 1.3 0.26 11.7 1.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5313) HILPDA PF15220.6 NODE_67785_length_234_cov_2.155779_g59844_i0reverse_frame_2 - 0.028 14.5 0.1 0.037 14.1 0.1 1.2 1 0 0 1 1 1 0 Hypoxia-inducible lipid droplet-associated Transglut_core2 PF13369.6 NODE_67782_length_234_cov_2.185930_g59841_i0reverse_frame_2 - 0.063 12.8 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily Dzip-like_N PF13815.6 NODE_67781_length_234_cov_2.206030_g59840_i0forward_frame_2 - 0.0002 21.3 0.2 0.00027 20.9 0.2 1.2 1 0 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal Dicty_REP PF05086.12 NODE_67780_length_234_cov_2.206030_g59839_i0forward_frame_3 - 0.074 11.0 1.6 0.073 11.0 1.6 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein SNAPc_SNAP43 PF09808.9 NODE_67778_length_234_cov_2.256281_g59837_i0forward_frame_3 - 0.091 12.7 1.5 0.1 12.5 1.5 1.0 1 0 0 1 1 1 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 SpoU_methylase PF00588.19 NODE_67770_length_234_cov_2.407035_g59829_i0forward_frame_2 - 2.7e-05 24.4 0.1 4.4e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 SpoU rRNA Methylase family NumbF PF06311.12 NODE_67768_length_234_cov_2.452261_g59827_i0reverse_frame_2 - 0.044 14.3 0.2 0.05 14.2 0.2 1.1 1 0 0 1 1 1 0 NUMB domain ADAM17_MPD PF16698.5 NODE_67767_length_234_cov_2.457286_g59826_i0forward_frame_3 - 0.037 14.4 0.2 0.046 14.1 0.2 1.1 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 Spy1 PF11357.8 NODE_67765_length_234_cov_2.482412_g59824_i0forward_frame_3 - 0.02 15.2 0.0 0.021 15.1 0.0 1.1 1 0 0 1 1 1 0 Cell cycle regulatory protein Radical_SAM PF04055.21 NODE_67765_length_234_cov_2.482412_g59824_i0forward_frame_2 - 2.8e-07 31.0 0.0 3.2e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 Radical SAM superfamily Phage_antiter_Q PF06323.11 NODE_67763_length_234_cov_2.567839_g59822_i0reverse_frame_2 - 1 8.8 4.3 1.2 8.7 4.3 1.1 1 0 0 1 1 1 0 Phage antitermination protein Q BROMI PF14961.6 NODE_67763_length_234_cov_2.567839_g59822_i0reverse_frame_2 - 3.4 5.0 8.1 3.4 5.0 8.1 1.0 1 0 0 1 1 1 0 Broad-minded protein EHD_N PF16880.5 NODE_67763_length_234_cov_2.567839_g59822_i0forward_frame_2 - 0.034 14.0 0.0 0.065 13.1 0.0 1.4 1 0 0 1 1 1 0 N-terminal EH-domain containing protein DUF2808 PF10989.8 NODE_67762_length_234_cov_2.572864_g59821_i0reverse_frame_3 - 0.13 12.2 0.1 0.16 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2808) zf-BED PF02892.15 NODE_67762_length_234_cov_2.572864_g59821_i0reverse_frame_2 - 0.0059 16.6 0.1 0.0082 16.1 0.1 1.2 1 0 0 1 1 1 1 BED zinc finger zf-FLZ PF04570.14 NODE_67762_length_234_cov_2.572864_g59821_i0reverse_frame_2 - 0.14 11.7 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 PSI_8 PF00796.18 NODE_67761_length_234_cov_2.623116_g59820_i0reverse_frame_2 - 0.35 10.7 3.3 0.63 9.9 3.3 1.3 1 0 0 1 1 1 0 Photosystem I reaction centre subunit VIII Pox_A3L PF05288.11 NODE_67757_length_234_cov_2.798995_g59816_i0reverse_frame_2 - 0.14 12.2 0.4 0.21 11.6 0.0 1.4 2 0 0 2 2 2 0 Poxvirus A3L Protein RepA1_leader PF08048.12 NODE_67754_length_234_cov_2.909548_g59813_i0forward_frame_3 - 0.027 14.7 1.3 0.051 13.8 1.3 1.5 1 0 0 1 1 1 0 Tap RepA1 leader peptide Herpes_capsid PF06112.11 NODE_67746_length_234_cov_3.351759_g59805_i0forward_frame_3 - 8.4 6.4 9.3 8.9 6.4 9.3 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein IL1 PF00340.19 NODE_67743_length_234_cov_3.708543_g59802_i0forward_frame_2 - 0.043 13.5 0.1 0.06 13.0 0.1 1.2 1 0 0 1 1 1 0 Interleukin-1 / 18 DUF2650 PF10853.8 NODE_67742_length_234_cov_3.733668_g59801_i0reverse_frame_2 - 0.27 11.0 1.5 3.4 7.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2650) UPF0164 PF03687.13 NODE_67738_length_234_cov_3.964824_g59797_i0forward_frame_3 - 0.044 12.6 0.0 0.049 12.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0164) MutH PF02976.15 NODE_67736_length_234_cov_5.085427_g59795_i0forward_frame_2 - 0.069 13.2 0.4 0.099 12.7 0.4 1.4 1 1 0 1 1 1 0 DNA mismatch repair enzyme MutH AA_permease_C PF13906.6 NODE_67736_length_234_cov_5.085427_g59795_i0forward_frame_2 - 1 9.5 4.4 0.27 11.3 0.5 1.9 2 0 0 2 2 2 0 C-terminus of AA_permease Pap_E4 PF02711.14 NODE_67735_length_234_cov_5.100503_g59794_i0reverse_frame_3 - 1.3 10.1 11.6 2.3 9.2 11.6 1.4 1 1 0 1 1 1 0 E4 protein FAM76 PF16046.5 NODE_67735_length_234_cov_5.100503_g59794_i0reverse_frame_3 - 6.2 6.1 12.2 6.5 6.0 12.2 1.0 1 0 0 1 1 1 0 FAM76 protein VEGFR-2_TMD PF17988.1 NODE_67735_length_234_cov_5.100503_g59794_i0forward_frame_2 - 1.9 8.0 8.0 1.8 8.1 6.2 2.0 1 1 0 1 1 1 0 VEGFR-2 Transmembrane domain DUF733 PF05306.11 NODE_67734_length_234_cov_7.346734_g59793_i0reverse_frame_2 - 0.018 15.3 1.1 0.025 14.9 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF733) wnt PF00110.19 NODE_67734_length_234_cov_7.346734_g59793_i0forward_frame_3 - 5.4 6.5 6.1 7.8 6.0 0.7 2.0 1 1 1 2 2 2 0 wnt family TMEM135_C_rich PF15982.5 NODE_67730_length_234_cov_29.346734_g59789_i0forward_frame_3 - 0.052 14.1 0.2 0.059 14.0 0.2 1.1 1 0 0 1 1 1 0 N-terminal cysteine-rich region of Transmembrane protein 135 RCDG1 PF15725.5 NODE_67729_length_234_cov_29.693467_g59788_i0reverse_frame_2 - 1.1 9.8 8.2 1.3 9.5 8.2 1.3 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein Rubella_E2 PF05749.11 NODE_67729_length_234_cov_29.693467_g59788_i0reverse_frame_2 - 5.3 6.4 9.7 6.2 6.2 9.7 1.0 1 0 0 1 1 1 0 Rubella membrane glycoprotein E2 LacY_symp PF01306.19 NODE_67727_length_234_cov_30.432161_g59786_i0reverse_frame_2 - 0.14 10.9 13.3 0.14 10.9 13.3 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter DUF3290 PF11694.8 NODE_67727_length_234_cov_30.432161_g59786_i0reverse_frame_2 - 1.8 8.5 5.0 2.1 8.3 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) Transport_MerF PF11431.8 NODE_67725_length_234_cov_35.391960_g59784_i0reverse_frame_2 - 4.3 7.3 10.3 0.23 11.4 2.9 2.2 1 1 1 2 2 2 0 Membrane transport protein MerF DUF1392 PF07154.11 NODE_67725_length_234_cov_35.391960_g59784_i0forward_frame_3 - 0.038 14.1 0.6 0.044 13.9 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1392) CbtA_toxin PF06755.12 NODE_67720_length_234_cov_40.698492_g59779_i0reverse_frame_2 - 0.13 12.3 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 CbtA_toxin of type IV toxin-antitoxin system Rsd_AlgQ PF04353.13 NODE_67720_length_234_cov_40.698492_g59779_i0forward_frame_3 - 0.054 13.5 0.1 0.06 13.3 0.1 1.1 1 0 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Chordopox_A30L PF06015.12 NODE_67719_length_234_cov_42.175879_g59778_i0forward_frame_3 - 0.022 14.6 3.0 0.022 14.6 3.0 1.6 1 1 1 2 2 2 0 Chordopoxvirus A30L protein Ubiquitin_4 PF18036.1 NODE_67719_length_234_cov_42.175879_g59778_i0forward_frame_2 - 0.007 16.4 1.4 0.01 15.9 1.4 1.3 1 0 0 1 1 1 1 Ubiquitin-like domain HAP1_N PF04849.13 NODE_67714_length_234_cov_48.311558_g59773_i0reverse_frame_2 - 0.0016 17.7 1.1 0.0019 17.5 1.1 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region SlyX PF04102.12 NODE_67714_length_234_cov_48.311558_g59773_i0reverse_frame_2 - 0.046 14.3 1.7 0.062 13.9 1.7 1.2 1 0 0 1 1 1 0 SlyX SLATT_4 PF18186.1 NODE_67713_length_234_cov_48.984925_g59772_i0reverse_frame_3 - 0.019 14.6 0.1 0.02 14.5 0.1 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 DUF2516 PF10724.9 NODE_67713_length_234_cov_48.984925_g59772_i0reverse_frame_3 - 0.026 14.8 0.4 0.033 14.5 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2516) BOF PF04076.13 NODE_67709_length_234_cov_50.296482_g59768_i0forward_frame_3 - 0.0069 16.4 0.1 0.0079 16.2 0.1 1.0 1 0 0 1 1 1 1 Bacterial OB fold (BOF) protein Caldesmon PF02029.15 NODE_67704_length_234_cov_53.778894_g59763_i0reverse_frame_3 - 0.042 12.6 21.6 0.043 12.6 21.6 1.0 1 0 0 1 1 1 0 Caldesmon DUF5401 PF17380.2 NODE_67704_length_234_cov_53.778894_g59763_i0reverse_frame_3 - 5.1 5.0 19.7 5.1 5.0 19.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF1148 PF06618.11 NODE_67704_length_234_cov_53.778894_g59763_i0forward_frame_3 - 0.024 14.8 1.6 0.026 14.7 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1148) Trypan_PARP PF05887.11 NODE_67699_length_234_cov_59.326633_g59758_i0reverse_frame_3 - 0.17 11.9 1.5 0.18 11.8 1.5 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Serglycin PF04360.12 NODE_67699_length_234_cov_59.326633_g59758_i0forward_frame_3 - 6.9 6.6 7.5 11 6.0 7.4 1.5 1 1 1 2 2 2 0 Serglycin RRM_2 PF04059.12 NODE_67692_length_234_cov_68.733668_g59751_i0forward_frame_3 - 6e-07 29.6 0.0 8.2e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif 2 CitMHS PF03600.16 NODE_67691_length_234_cov_69.145729_g59750_i0forward_frame_2 - 0.017 14.3 0.7 0.019 14.2 0.7 1.1 1 0 0 1 1 1 0 Citrate transporter ECSCR PF15820.5 NODE_67691_length_234_cov_69.145729_g59750_i0forward_frame_2 - 0.2 11.5 2.8 0.22 11.3 2.8 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF2628 PF10947.8 NODE_67691_length_234_cov_69.145729_g59750_i0forward_frame_2 - 1.7 9.0 9.3 10 6.5 9.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) XkdW PF09636.10 NODE_67689_length_234_cov_78.125628_g59748_i0reverse_frame_3 - 0.045 13.8 0.0 0.046 13.8 0.0 1.2 1 0 0 1 1 1 0 XkdW protein Vma12 PF11712.8 NODE_67689_length_234_cov_78.125628_g59748_i0forward_frame_3 - 0.18 11.9 2.6 0.21 11.6 2.6 1.2 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Myf5 PF12232.8 NODE_67688_length_234_cov_79.030151_g59747_i0reverse_frame_3 - 0.39 11.5 4.6 1.2 9.9 4.6 2.0 1 1 0 1 1 1 0 Myogenic determination factor 5 AAA_lid_11 PF18198.1 NODE_67685_length_234_cov_87.854271_g59744_i0forward_frame_2 - 0.083 12.7 0.1 0.089 12.6 0.1 1.1 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain Pox_RNA_Pol_19 PF05320.12 NODE_67683_length_234_cov_92.507538_g59742_i0forward_frame_3 - 0.69 9.9 13.8 0.76 9.7 13.8 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit HXXEE PF13787.6 NODE_67681_length_234_cov_113.170854_g59740_i0forward_frame_3 - 0.075 13.8 2.1 0.082 13.7 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif Pkinase PF00069.25 NODE_67680_length_234_cov_118.457286_g59739_i0reverse_frame_3 - 9.8e-09 34.9 0.7 1.1e-08 34.8 0.1 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67680_length_234_cov_118.457286_g59739_i0reverse_frame_3 - 0.033 13.5 0.0 0.051 12.8 0.0 1.3 1 1 0 1 1 1 0 Protein tyrosine kinase DprA_WH PF17782.1 NODE_67678_length_234_cov_124.477387_g59737_i0reverse_frame_3 - 0.023 14.8 1.3 0.037 14.1 1.3 1.5 1 1 0 1 1 1 0 DprA winged helix domain DEC-1_N PF04625.13 NODE_67678_length_234_cov_124.477387_g59737_i0reverse_frame_3 - 1.6 7.7 4.7 1.5 7.8 4.7 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Rad10 PF03834.14 NODE_67675_length_234_cov_174.140704_g59734_i0reverse_frame_3 - 0.059 13.4 0.0 0.063 13.3 0.0 1.1 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) DNApol_Exo PF18136.1 NODE_67673_length_234_cov_190.251256_g59732_i0forward_frame_2 - 0.12 11.5 0.3 0.15 11.2 0.3 1.1 1 0 0 1 1 1 0 DNA mitochondrial polymerase exonuclease domain YchF-GTPase_C PF06071.13 NODE_67668_length_234_cov_515.864322_g59727_i0reverse_frame_3 - 0.036 14.2 0.0 0.049 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF933) Rop PF01815.16 NODE_67667_length_234_cov_971.366834_g59726_i0reverse_frame_3 - 0.16 11.8 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Rop protein DUF4532 PF15046.6 NODE_67665_length_234_cov_2021.733668_g59724_i0forward_frame_2 - 0.061 12.5 4.3 0.067 12.4 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4532) DUF4267 PF14087.6 ORF99884 - 0.033 14.3 0.0 0.037 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4267) DUF4729 PF15866.5 ORF99422 - 0.0043 16.4 0.3 0.0047 16.3 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4729) Vma12 PF11712.8 ORF97844 - 0.3 11.2 2.0 0.4 10.7 2.0 1.2 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Leptin PF02024.15 ORF97520 - 0.016 15.0 0.1 0.018 14.9 0.1 1.1 1 0 0 1 1 1 0 Leptin mRNA_stabil PF13929.6 ORF96665 - 0.0017 17.4 0.4 0.0017 17.4 0.4 1.0 1 0 0 1 1 1 1 mRNA stabilisation DUF1348 PF07080.11 ORF96665 - 0.048 13.6 0.2 0.051 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1348) Flu_PB1 PF00602.17 ORF96528 - 0.062 11.4 0.0 0.063 11.4 0.0 1.0 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PB1 VPS13_mid_rpt PF16910.5 ORF96459 - 0.0063 16.0 0.0 0.0072 15.8 0.0 1.1 1 0 0 1 1 1 1 Repeating coiled region of VPS13 DUF4812 PF16071.5 ORF95791 - 0.039 13.8 0.1 0.055 13.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4812) DUF4729 PF15866.5 ORF95679 - 0.0059 16.0 0.4 0.0063 15.9 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4729) YqzL PF14006.6 ORF95239 - 0.02 15.2 0.1 0.031 14.7 0.1 1.3 1 0 0 1 1 1 0 YqzL-like protein DUF2197 PF09963.9 ORF95239 - 0.11 12.8 0.4 0.17 12.1 0.1 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) DUF1719 PF08224.11 ORF94365 - 0.076 12.1 0.4 0.083 12.0 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) GDPD_2 PF13653.6 ORF93866 - 3.2e-06 27.4 0.0 2e-05 24.9 0.0 2.1 2 0 0 2 2 2 1 Glycerophosphoryl diester phosphodiesterase family GDPD PF03009.17 ORF93866 - 0.00013 21.8 0.0 0.00013 21.8 0.0 1.1 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family DUF4996 PF16387.5 ORF93866 - 0.02 15.4 0.0 0.028 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function Tnp_DNA_bind PF14706.6 ORF9377 - 0.025 14.5 0.3 0.032 14.1 0.3 1.2 1 0 0 1 1 1 0 Transposase DNA-binding JHY PF15261.6 ORF93693 - 0.012 16.4 2.4 0.039 14.7 2.4 1.8 1 1 0 1 1 1 0 Jhy protein DUF3792 PF12670.7 ORF93109 - 0.0045 17.1 0.2 0.0058 16.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3792) EF-hand_1 PF00036.32 ORF92382 - 3.6e-20 70.0 5.8 7.1e-10 37.7 0.1 2.1 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF92382 - 1.4e-16 58.9 1.6 4.9e-10 38.5 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF92382 - 1.8e-15 57.1 0.2 2.1e-15 56.9 0.2 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF92382 - 3.7e-13 49.1 3.5 1.6e-08 34.3 0.3 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF92382 - 7.6e-13 47.3 6.0 1.5e-06 27.4 0.3 2.3 2 0 0 2 2 2 2 EF hand EF-hand_9 PF14658.6 ORF92382 - 3.4e-08 33.7 0.1 5.2e-08 33.1 0.0 1.3 1 1 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF92382 - 7.7e-05 22.6 0.3 0.00024 21.0 0.3 1.6 1 1 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF92382 - 0.0011 19.2 0.0 0.0014 19.0 0.0 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF92382 - 0.033 14.4 1.4 0.078 13.2 1.5 1.6 1 1 1 2 2 2 0 Dockerin type I domain UPF0154 PF03672.13 ORF92382 - 0.12 12.5 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) RNA_pol_Rpb1_5 PF04998.17 ORF91675 - 3.4e-16 59.5 0.0 3.7e-16 59.4 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RRM_1 PF00076.22 ORF9065 - 5.1e-14 51.8 0.0 6.1e-14 51.6 0.0 1.0 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Requiem_N PF14051.6 ORF9065 - 0.074 13.3 0.0 0.097 12.9 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of DPF2/REQ. adh_short PF00106.25 ORF9065 - 0.11 11.9 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 short chain dehydrogenase RRM_5 PF13893.6 ORF9065 - 0.16 11.6 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ELYS-bb PF16687.5 ORF89982 - 0.054 12.1 0.0 0.057 12.0 0.0 1.1 1 0 0 1 1 1 0 beta-propeller of ELYS nucleoporin Cu-oxidase_4 PF02578.15 ORF88887 - 0.051 13.2 0.1 0.055 13.1 0.1 1.0 1 0 0 1 1 1 0 Multi-copper polyphenol oxidoreductase laccase S-AdoMet_synt_M PF02772.16 ORF88140 - 0.055 13.7 0.0 0.056 13.7 0.0 1.0 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, central domain SpoIIIAH PF12685.7 ORF86608 - 0.19 11.6 1.4 12 5.6 0.1 2.1 2 0 0 2 2 2 0 SpoIIIAH-like protein SMN PF06003.12 ORF86608 - 0.33 10.2 0.7 0.41 9.8 0.7 1.1 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) Leptin PF02024.15 ORF86557 - 0.016 15.0 0.1 0.018 14.9 0.1 1.1 1 0 0 1 1 1 0 Leptin Tetraspanin PF00335.20 ORF85715 - 0.004 16.9 0.8 0.0048 16.6 0.8 1.0 1 0 0 1 1 1 1 Tetraspanin family Myelin_PLP PF01275.19 ORF85715 - 0.0048 16.8 0.1 0.0052 16.7 0.1 1.0 1 0 0 1 1 1 1 Myelin proteolipid protein (PLP or lipophilin) Stevor PF17410.2 ORF85715 - 0.019 14.5 0.4 0.022 14.3 0.4 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF2157 PF09925.9 ORF85715 - 0.023 14.5 0.1 0.026 14.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF4227 PF14004.6 ORF85715 - 0.11 12.4 0.3 0.17 11.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) zf-C2HE PF16278.5 ORF85650 - 0.036 14.5 1.0 0.046 14.2 1.0 1.3 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger GpcrRhopsn4 PF10192.9 ORF85074 - 0.032 13.6 0.0 0.037 13.4 0.0 1.1 1 0 0 1 1 1 0 Rhodopsin-like GPCR transmembrane domain Ribosomal_L23eN PF03939.13 ORF84949 - 2.2e-08 34.2 2.0 3.5e-08 33.5 2.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L23, N-terminal domain Ribosomal_L23 PF00276.20 ORF84949 - 0.00022 21.5 0.1 0.00047 20.5 0.0 1.5 2 0 0 2 2 2 1 Ribosomal protein L23 Ribonuc_2-5A PF06479.12 ORF84726 - 0.00089 19.4 0.2 0.0011 19.2 0.2 1.1 1 0 0 1 1 1 1 Ribonuclease 2-5A SinI PF08671.10 ORF84371 - 0.0058 16.4 2.4 0.55 10.1 0.1 2.3 2 0 0 2 2 2 2 Anti-repressor SinI LigT_PEase PF02834.16 ORF84340 - 6e-08 32.8 0.0 8.5e-08 32.3 0.0 1.4 1 1 0 1 1 1 1 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 ORF84340 - 0.017 15.1 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 2'-5' RNA ligase superfamily ATXN-1_C PF12547.8 ORF83766 - 3.5 8.0 9.1 0.22 11.9 1.7 2.1 2 0 0 2 2 2 0 Capicua transcriptional repressor modulator KAsynt_C_assoc PF16197.5 ORF82820 - 0.00058 20.3 0.0 0.00073 20.0 0.0 1.2 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension NPC1_N PF16414.5 ORF81367 - 0.043 13.4 0.0 0.043 13.4 0.0 1.1 1 0 0 1 1 1 0 Niemann-Pick C1 N terminus Polysacc_synt_4 PF04669.13 ORF81367 - 0.044 13.3 0.0 0.051 13.1 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis ATP_bind_3 PF01171.20 ORF81367 - 0.082 12.7 0.1 0.082 12.7 0.1 1.1 1 0 0 1 1 1 0 PP-loop family DUF730 PF05325.11 ORF81177 - 0.022 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF730) MFA1_2 PF17317.2 ORF80935 - 0.0032 17.2 0.0 0.0048 16.6 0.0 1.3 1 0 0 1 1 1 1 Mating hormone A-factor 1&2 SinI PF08671.10 ORF80781 - 0.0058 16.4 2.4 0.55 10.1 0.1 2.3 2 0 0 2 2 2 2 Anti-repressor SinI NodS PF05401.11 ORF80312 - 0.094 12.3 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) Metallothio_11 PF02066.15 ORF80128 - 0.041 14.1 0.1 0.055 13.6 0.1 1.2 1 0 0 1 1 1 0 Metallothionein family 11 ChpA-C PF03777.13 ORF80123 - 0.28 11.1 12.7 0.39 10.6 12.7 1.3 1 0 0 1 1 1 0 ChpA-C Popeye PF04831.13 ORF79892 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region Leptin PF02024.15 ORF79187 - 0.016 15.0 0.1 0.018 14.9 0.1 1.1 1 0 0 1 1 1 0 Leptin DUF3437 PF11919.8 ORF78852 - 0.067 13.1 0.3 0.085 12.8 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DUF840 PF05801.11 ORF78660 - 0.083 13.0 0.0 0.094 12.8 0.0 1.1 1 0 0 1 1 1 0 Lagovirus protein of unknown function (DUF840) Sgf11_N PF18519.1 ORF77830 - 0.099 12.2 0.1 0.22 11.1 0.1 1.5 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain TPR_2 PF07719.17 ORF76646 - 0.00091 19.2 0.4 0.0028 17.7 0.1 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF76646 - 0.0016 18.2 0.9 0.0034 17.1 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF76646 - 0.037 13.7 0.4 0.089 12.5 0.0 1.9 2 1 0 2 2 2 0 TPR repeat TPR_8 PF13181.6 ORF76646 - 0.15 12.4 0.6 0.4 11.0 0.1 2.0 2 1 0 2 2 2 0 Tetratricopeptide repeat Popeye PF04831.13 ORF76410 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region Popeye PF04831.13 ORF76407 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region HTH_17 PF12728.7 ORF76177 - 0.044 14.0 0.1 1.1 9.5 0.0 2.3 2 1 1 3 3 3 0 Helix-turn-helix domain Tub PF01167.18 ORF75733 - 4.8e-07 29.8 0.3 5.2e-07 29.7 0.3 1.2 1 1 0 1 1 1 1 Tub family Myc_target_1 PF15179.6 ORF7572 - 0.032 14.1 2.1 0.034 14.1 2.1 1.1 1 0 0 1 1 1 0 Myc target protein 1 Ldt_C PF17969.1 ORF7572 - 0.093 13.5 0.2 0.14 12.9 0.2 1.4 1 1 0 1 1 1 0 L,D-transpeptidase C-terminal domain HGD-D PF06050.13 ORF755 - 0.038 13.8 0.1 0.038 13.8 0.1 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component HTH_WhiA PF02650.14 ORF75184 - 0.018 15.3 1.2 0.027 14.8 0.8 1.5 1 1 0 1 1 1 0 WhiA C-terminal HTH domain DUF1640 PF07798.11 ORF75184 - 0.11 12.5 6.6 0.13 12.3 6.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) Exonuc_VII_L PF02601.15 ORF75184 - 0.19 11.2 5.9 0.21 11.1 5.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit HSBP1 PF06825.12 ORF74925 - 2.6e-26 91.2 3.5 3e-26 91.0 3.5 1.1 1 0 0 1 1 1 1 Heat shock factor binding protein 1 Erythro-docking PF09277.11 ORF74925 - 0.02 14.8 0.3 0.043 13.7 0.3 1.6 1 0 0 1 1 1 0 Erythronolide synthase, docking EspB PF05802.11 ORF74925 - 0.049 13.6 0.5 0.052 13.6 0.5 1.2 1 0 0 1 1 1 0 Enterobacterial EspB protein Shugoshin_N PF07558.11 ORF74925 - 0.05 13.5 0.2 0.14 12.1 0.0 1.7 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region YvrJ PF12841.7 ORF74925 - 0.052 13.1 0.3 0.44 10.1 0.1 2.1 2 0 0 2 2 2 0 YvrJ protein family FtsK_SpoIIIE PF01580.18 ORF74925 - 0.063 12.6 0.1 0.072 12.4 0.1 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family FliD_C PF07195.12 ORF74925 - 0.08 12.3 0.2 0.095 12.1 0.2 1.0 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus DUF5447 PF17525.2 ORF74836 - 0.026 15.0 0.4 0.033 14.6 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5447) PikAIV_N PF18605.1 ORF74776 - 0.097 12.3 0.2 0.19 11.4 0.2 1.5 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain ubiquitin PF00240.23 ORF74054 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF74054 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF74054 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF74054 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF74054 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF74054 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF74054 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF74054 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF74054 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain SDF PF00375.18 ORF74014 - 0.24 10.4 0.1 0.28 10.1 0.1 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family DUF1974 PF09317.11 ORF73989 - 0.1 12.1 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) Methyltransf_34 PF11312.8 ORF73989 - 0.11 11.8 0.2 0.12 11.6 0.2 1.0 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase OppC_N PF12911.7 ORF73558 - 0.00025 20.9 0.9 0.12 12.3 0.1 2.1 2 0 0 2 2 2 2 N-terminal TM domain of oligopeptide transport permease C DUF4348 PF14254.6 ORF73509 - 0.027 13.9 0.2 0.03 13.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4348) DUF1084 PF06454.11 ORF73507 - 0.012 15.1 5.0 0.015 14.7 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DUF5090 PF17009.5 ORF73507 - 0.3 11.0 4.5 0.35 10.8 4.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) ubiquitin PF00240.23 ORF73113 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF73113 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF73113 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF73113 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF73113 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF73113 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF73113 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF73113 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF73113 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain LexA_DNA_bind PF01726.16 ORF72619 - 0.13 12.1 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 LexA DNA binding domain Myb_DNA-binding PF00249.31 ORF72608 - 7e-09 35.8 0.2 8.9e-09 35.4 0.2 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF72608 - 6.3e-06 26.3 0.3 8.6e-06 25.9 0.3 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain SLIDE PF09111.10 ORF72608 - 0.0022 18.0 0.2 0.0025 17.8 0.2 1.1 1 0 0 1 1 1 1 SLIDE Peptidase_M4_C PF02868.15 ORF72608 - 0.026 14.4 0.1 0.036 13.9 0.1 1.3 1 1 0 1 1 1 0 Thermolysin metallopeptidase, alpha-helical domain PBP_like PF12727.7 ORF71922 - 0.21 10.7 0.0 0.25 10.4 0.0 1.0 1 0 0 1 1 1 0 PBP superfamily domain Pkinase PF00069.25 ORF7179 - 9.3e-14 51.4 1.1 9.9e-14 51.3 1.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7179 - 5.2e-11 42.3 0.5 5.5e-11 42.2 0.5 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1348 PF07080.11 ORF71704 - 0.067 13.1 0.4 0.23 11.4 0.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1348) CENP-R PF06729.12 ORF71704 - 0.079 12.9 0.1 0.09 12.7 0.1 1.0 1 0 0 1 1 1 0 Kinetochore component, CENP-R DUF4219 PF13961.6 ORF71309 - 0.071 12.8 0.4 0.12 12.1 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4219) DUF1380 PF07128.12 ORF71297 - 0.14 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1380) Homeodomain PF00046.29 ORF71152 - 0.0016 18.3 6.0 0.0018 18.1 6.0 1.1 1 0 0 1 1 1 1 Homeodomain Paramyxo_ncap PF00973.19 ORF71152 - 0.013 14.5 0.3 0.014 14.4 0.3 1.0 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein YdaS_antitoxin PF15943.5 ORF71152 - 0.14 12.0 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Popeye PF04831.13 ORF70731 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region CDV3 PF15359.6 ORF70522 - 0.011 16.2 1.7 0.012 16.1 1.7 1.0 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 CybS PF05328.12 ORF70505 - 0.037 13.7 0.0 0.044 13.5 0.0 1.1 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit MCR PF18509.1 ORF70505 - 7.1 6.3 8.5 1.7 8.3 1.0 2.3 2 0 0 2 2 2 0 Magnetochrome domain Roughex PF06020.11 ORF70112 - 0.094 11.8 2.7 0.097 11.8 2.7 1.0 1 0 0 1 1 1 0 Drosophila roughex protein Halogen_Hydrol PF10112.9 ORF69721 - 0.0005 20.2 0.8 0.00054 20.0 0.8 1.1 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein PriC PF07445.12 ORF69721 - 0.019 14.9 0.2 0.022 14.7 0.2 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC Remorin_C PF03763.13 ORF69721 - 0.03 14.2 2.1 0.037 13.9 2.1 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region MetOD2 PF18548.1 ORF69721 - 0.075 13.2 2.1 0.16 12.1 2.1 1.7 1 1 0 1 1 1 0 Metanogen output domain 2 HTH_Tnp_Tc3_1 PF11427.8 ORF69721 - 0.085 12.7 0.3 0.21 11.4 0.1 1.6 1 1 1 2 2 2 0 Tc3 transposase Popeye PF04831.13 ORF69672 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region RCC1_2 PF13540.6 ORF6939 - 0.0012 18.5 3.2 0.48 10.3 0.2 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF1509 PF07420.11 ORF6939 - 0.11 11.5 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) HigB_toxin PF09907.9 ORF69366 - 0.05 13.8 0.1 0.07 13.4 0.1 1.4 1 0 0 1 1 1 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system BLOC1S3 PF15753.5 ORF69366 - 0.12 12.5 1.1 0.13 12.4 1.1 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 GDP_Man_Dehyd PF16363.5 ORF6891 - 0.012 15.0 0.0 0.013 15.0 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase CxC7 PF18866.1 ORF68763 - 0.053 13.7 0.5 0.069 13.3 0.5 1.2 1 0 0 1 1 1 0 CxC7 like cysteine cluster associated with KDZ transposases FerI PF08151.12 ORF68561 - 7e-10 38.8 1.6 8.2e-10 38.6 1.6 1.2 1 0 0 1 1 1 1 FerI (NUC094) domain DUF3073 PF11273.8 ORF68459 - 0.11 13.3 0.1 0.14 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) ADH_zinc_N_2 PF13602.6 ORF67983 - 0.0016 19.5 0.0 0.0016 19.5 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Importin_rep PF18773.1 ORF67983 - 0.19 11.5 0.5 0.39 10.5 0.5 1.5 1 1 0 1 1 1 0 Importin 13 repeat EGF_alliinase PF04863.13 ORF67854 - 0.023 15.1 0.2 2.1 8.8 0.1 2.1 2 0 0 2 2 2 0 Alliinase EGF-like domain Halogen_Hydrol PF10112.9 ORF67669 - 0.0005 20.2 0.8 0.00054 20.0 0.8 1.1 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein PriC PF07445.12 ORF67669 - 0.019 14.9 0.2 0.022 14.7 0.2 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC Remorin_C PF03763.13 ORF67669 - 0.03 14.2 2.1 0.037 13.9 2.1 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region MetOD2 PF18548.1 ORF67669 - 0.075 13.2 2.1 0.16 12.1 2.1 1.7 1 1 0 1 1 1 0 Metanogen output domain 2 HTH_Tnp_Tc3_1 PF11427.8 ORF67669 - 0.085 12.7 0.3 0.21 11.4 0.1 1.6 1 1 1 2 2 2 0 Tc3 transposase Rep_trans PF02486.19 ORF67588 - 0.024 14.4 0.4 0.025 14.3 0.4 1.0 1 0 0 1 1 1 0 Replication initiation factor Prion_bPrPp PF11587.8 ORF66770 - 0.082 12.8 0.2 0.082 12.8 0.2 1.8 2 0 0 2 2 2 0 Major prion protein bPrPp - N terminal Phage_AlpA PF05930.12 ORF66063 - 0.017 14.9 0.1 0.21 11.4 0.1 2.5 2 1 1 3 3 3 0 Prophage CP4-57 regulatory protein (AlpA) Mg_trans_NIPA PF05653.14 ORF65991 - 7.7e-05 21.9 2.8 8.2e-05 21.9 2.8 1.0 1 0 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 ORF65991 - 9.6e-05 22.6 3.8 9.6e-05 22.6 3.8 1.4 2 0 0 2 2 2 1 EamA-like transporter family EmrE PF13536.6 ORF65991 - 0.0054 16.4 3.4 0.0061 16.2 3.4 1.0 1 0 0 1 1 1 1 Putative multidrug resistance efflux transporter LEAP-2 PF07359.11 ORF65991 - 0.007 16.2 0.2 0.011 15.6 0.2 1.3 1 0 0 1 1 1 1 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) DUF2304 PF10066.9 ORF65991 - 0.012 15.8 3.2 0.014 15.6 3.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) PrgI PF12666.7 ORF65991 - 0.078 13.7 0.4 0.092 13.5 0.4 1.2 1 0 0 1 1 1 0 PrgI family protein Peptidase_M26_N PF05342.14 ORF65728 - 0.034 13.5 0.1 0.036 13.5 0.1 1.1 1 0 0 1 1 1 0 M26 IgA1-specific Metallo-endopeptidase N-terminal region DUF1438 PF07270.11 ORF65586 - 0.013 15.6 0.2 0.014 15.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1438) Phage_int_SAM_4 PF13495.6 ORF65586 - 0.1 13.1 0.1 0.13 12.8 0.1 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain JHY PF15261.6 ORF65332 - 0.012 16.4 2.4 0.039 14.7 2.4 1.8 1 1 0 1 1 1 0 Jhy protein Apelin PF15360.6 ORF6498 - 0.087 13.4 17.0 0.21 12.2 16.6 1.9 1 1 0 1 1 1 0 APJ endogenous ligand FhuF_C PF11575.8 ORF64961 - 0.024 14.6 0.4 0.6 10.1 0.0 2.4 2 0 0 2 2 2 0 FhuF 2Fe-2S C-terminal domain CitMHS_2 PF16980.5 ORF64918 - 0.018 13.7 0.0 0.02 13.5 0.0 1.0 1 0 0 1 1 1 0 Putative citrate transport RRM_7 PF16367.5 ORF64438 - 0.13 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif zf-H2C2_2 PF13465.6 ORF64198 - 6.5e-10 39.0 9.8 1.2e-08 35.0 1.0 3.3 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF64198 - 1.5e-08 34.6 9.8 3.5e-06 27.2 1.7 2.6 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF64198 - 1.7e-07 31.5 5.7 0.00017 22.1 1.2 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF64198 - 5.4e-05 23.4 2.0 6.2e-05 23.2 2.0 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF64198 - 0.0026 18.1 2.7 0.012 15.9 0.3 2.6 2 1 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF64198 - 0.01 15.6 0.1 0.01 15.6 0.1 1.5 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF64198 - 0.032 14.5 0.2 0.032 14.5 0.2 2.8 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-C2H2_aberr PF17017.5 ORF64198 - 0.07 13.3 0.4 0.07 13.3 0.4 2.0 1 1 0 2 2 2 0 Aberrant zinc-finger Zn-ribbon_8 PF09723.10 ORF64198 - 0.13 12.4 1.9 0.79 9.9 0.3 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF64198 - 0.13 12.3 9.5 0.23 11.5 5.6 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger C1_1 PF00130.22 ORF64198 - 0.17 11.8 6.4 0.43 10.5 2.8 2.6 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-H2C2_5 PF13909.6 ORF64198 - 0.22 11.3 10.4 0.32 10.8 6.3 2.8 2 1 0 2 2 2 0 C2H2-type zinc-finger domain zf-C2HC_2 PF13913.6 ORF64198 - 0.22 11.4 5.6 10 6.1 0.1 2.8 2 1 0 2 2 2 0 zinc-finger of a C2HC-type APC_basic PF05956.11 ORF63741 - 0.021 14.3 4.2 0.021 14.3 4.2 1.0 1 0 0 1 1 1 0 APC basic domain FAS_N PF17828.1 ORF63621 - 0.047 13.7 0.1 0.052 13.6 0.1 1.1 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta zf-RING_14 PF17978.1 ORF6353 - 0.056 13.9 2.3 0.075 13.5 2.3 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Transposase_23 PF03017.14 ORF63494 - 0.083 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 TNP1/EN/SPM transposase Ribosomal_L35Ae PF01247.18 ORF63242 - 0.091 12.9 0.0 0.88 9.8 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein L35Ae ubiquitin PF00240.23 ORF63199 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF63199 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF63199 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF63199 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF63199 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF63199 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF63199 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF63199 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF63199 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain DUF3906 PF13046.6 ORF63023 - 0.027 14.6 0.0 0.033 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3906) Img2 PF05046.14 ORF63023 - 0.16 12.3 0.0 0.19 12.1 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) STAG PF08514.11 ORF62606 - 0.23 11.4 0.7 0.33 10.9 0.7 1.2 1 0 0 1 1 1 0 STAG domain EF-hand_5 PF13202.6 ORF626 - 7.1e-05 22.1 0.0 0.00018 20.8 0.0 1.6 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF626 - 0.00091 19.0 0.0 0.0058 16.5 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF626 - 0.00096 18.5 0.0 0.0053 16.2 0.0 1.9 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF626 - 0.005 16.7 0.0 0.008 16.0 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF626 - 0.0091 16.4 0.0 0.0098 16.3 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair Herpes_capsid PF06112.11 ORF6254 - 6.2 6.9 20.7 6.6 6.8 20.7 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Cation_ATPase_C PF00689.21 ORF62370 - 0.12 12.0 0.1 0.15 11.8 0.1 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF4258 PF14076.6 ORF62370 - 0.13 12.7 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4258) ubiquitin PF00240.23 ORF61832 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF61832 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF61832 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF61832 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF61832 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF61832 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF61832 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF61832 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF61832 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain Closter_coat PF01785.17 ORF61806 - 0.0032 16.8 0.3 0.0039 16.5 0.3 1.1 1 0 0 1 1 1 1 Closterovirus coat protein ubiquitin PF00240.23 ORF61722 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF61722 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF61722 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF61722 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF61722 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF61722 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF61722 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF61722 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF61722 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain PNP_phzG_C PF10590.9 ORF61634 - 0.96 9.6 6.5 21 5.3 0.0 2.5 2 1 1 3 3 3 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NEMO PF11577.8 ORF61573 - 0.00031 20.7 0.8 0.00044 20.2 0.8 1.2 1 0 0 1 1 1 1 NF-kappa-B essential modulator NEMO partial_CstF PF15861.5 ORF61573 - 0.013 15.3 0.9 0.016 14.9 0.9 1.2 1 0 0 1 1 1 0 Partial cleavage stimulation factor domain Transglut_core2 PF13369.6 ORF61168 - 0.12 11.9 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily Ank_5 PF13857.6 ORF61095 - 2.6e-05 24.4 0.1 0.015 15.6 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF61095 - 9e-05 22.9 0.0 0.026 15.1 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF61095 - 0.0001 22.6 0.0 0.17 12.4 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF61095 - 0.00021 21.8 0.0 0.041 14.5 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF61095 - 0.00039 20.6 0.1 0.11 13.1 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat DUF730 PF05325.11 ORF59720 - 0.022 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF730) DUF3522 PF12036.8 ORF5890 - 0.097 12.9 0.1 0.11 12.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3522) DUF723 PF05265.13 ORF58862 - 0.074 13.0 0.1 0.11 12.4 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF723) DUF4707 PF15806.5 ORF58721 - 0.019 14.0 0.1 0.02 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4707) Baculo_p24 PF05073.12 ORF58721 - 0.045 13.5 0.3 0.049 13.4 0.3 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein MsyB PF13984.6 ORF58405 - 1e-40 138.9 9.5 1.1e-40 138.8 9.5 1.0 1 0 0 1 1 1 1 MsyB protein RET_CLD1 PF17756.1 ORF58135 - 0.13 12.6 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 RET Cadherin like domain 1 Rtt106 PF08512.12 ORF57749 - 0.015 15.7 0.1 0.019 15.3 0.1 1.3 1 0 0 1 1 1 0 Histone chaperone Rttp106-like Pox_MCEL PF03291.16 ORF57530 - 0.13 11.4 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 mRNA capping enzyme Spt5-NGN PF03439.13 ORF57468 - 0.059 13.3 0.3 0.076 12.9 0.3 1.2 1 0 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section Sigma70_r1_1 PF03979.14 ORF57397 - 0.18 11.8 0.4 0.18 11.8 0.4 2.0 2 0 0 2 2 2 0 Sigma-70 factor, region 1.1 HGD-D PF06050.13 ORF57271 - 0.038 13.8 0.1 0.038 13.8 0.1 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component Popeye PF04831.13 ORF57117 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region ubiquitin PF00240.23 ORF5681 - 3.6e-27 93.9 0.3 3.9e-27 93.8 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF5681 - 2.2e-14 53.0 0.2 2.4e-14 52.9 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF5681 - 7.6e-08 32.6 0.1 8.6e-08 32.4 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 ORF5681 - 1e-05 25.9 0.2 3e-05 24.4 0.2 1.7 1 1 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF5681 - 0.00041 20.4 0.1 0.0008 19.5 0.1 1.5 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF5681 - 0.0058 17.2 0.0 0.006 17.1 0.0 1.1 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain DUF722 PF05263.11 ORF56079 - 0.18 12.0 0.3 0.25 11.6 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF722) Glyco_hydro_31 PF01055.26 ORF55405 - 2.1e-21 76.7 0.1 2.1e-21 76.7 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 S-AdoMet_synt_C PF02773.16 ORF55393 - 1.7e-07 31.3 0.0 2.2e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain HU-CCDC81_euk_2 PF18289.1 ORF55393 - 0.17 12.1 0.0 5.1 7.3 0.0 2.1 2 0 0 2 2 2 0 CCDC81 eukaryotic HU domain 2 Helo_like_N PF17111.5 ORF55195 - 0.032 13.6 0.1 0.035 13.5 0.1 1.1 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins DUF2304 PF10066.9 ORF55109 - 0.027 14.7 0.1 0.036 14.3 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) HRG PF16954.5 ORF55109 - 0.32 11.4 5.1 0.85 10.1 0.3 2.2 1 1 1 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene REC1 PF18501.1 ORF54704 - 0.086 12.7 12.7 0.091 12.6 12.7 1.0 1 0 0 1 1 1 0 Alpha helical recognition lobe domain SLY PF12485.8 ORF54704 - 1.2 9.8 10.5 1.3 9.7 10.5 1.1 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein Mit_KHE1 PF10173.9 ORF54704 - 5.1 7.1 7.4 6 6.9 7.4 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Phage_Orf51 PF06194.11 ORF54704 - 8.7 6.5 7.7 0.74 9.9 2.0 1.9 2 0 0 2 2 2 0 Phage Conserved Open Reading Frame 51 DUF1700 PF08006.11 ORF544 - 0.14 11.7 2.3 0.16 11.5 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Questin_oxidase PF14027.6 ORF544 - 0.3 10.6 0.8 0.33 10.4 0.8 1.0 1 0 0 1 1 1 0 Questin oxidase-like ATP-synt_J PF04911.12 ORF54209 - 0.0036 16.8 0.0 0.0057 16.2 0.0 1.3 1 0 0 1 1 1 1 ATP synthase j chain Imm6 PF14434.6 ORF53744 - 0.0039 17.1 0.1 0.0044 16.9 0.1 1.3 1 1 0 1 1 1 1 Immunity protein Imm6 zf-CCCH_6 PF18585.1 ORF53744 - 0.063 13.2 0.1 0.12 12.3 0.1 1.6 1 1 1 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 FAD_binding_5 PF00941.21 ORF53744 - 0.14 11.9 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain in molybdopterin dehydrogenase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks316.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks316.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks316.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks316.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UQ_con PF00179.26 ORF52903 - 9.1e-16 57.8 0.0 1e-15 57.6 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Svf1_C PF17187.4 ORF52625 - 0.03 14.2 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 Svf1-like C-terminal lipocalin-like domain TPR_2 PF07719.17 ORF52526 - 0.00091 19.2 0.4 0.0028 17.7 0.1 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF52526 - 0.0016 18.2 0.9 0.0034 17.1 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF52526 - 0.037 13.7 0.4 0.089 12.5 0.0 1.9 2 1 0 2 2 2 0 TPR repeat TPR_8 PF13181.6 ORF52526 - 0.15 12.4 0.6 0.4 11.0 0.1 2.0 2 1 0 2 2 2 0 Tetratricopeptide repeat Toxin_30 PF08117.11 ORF52456 - 0.038 14.2 0.2 0.057 13.7 0.2 1.3 1 0 0 1 1 1 0 Ptu family ChpA-C PF03777.13 ORF52125 - 0.28 11.1 12.7 0.39 10.6 12.7 1.3 1 0 0 1 1 1 0 ChpA-C HSBP1 PF06825.12 ORF51943 - 2.6e-26 91.2 3.5 3e-26 91.0 3.5 1.1 1 0 0 1 1 1 1 Heat shock factor binding protein 1 Erythro-docking PF09277.11 ORF51943 - 0.02 14.8 0.3 0.043 13.7 0.3 1.6 1 0 0 1 1 1 0 Erythronolide synthase, docking EspB PF05802.11 ORF51943 - 0.049 13.6 0.5 0.052 13.6 0.5 1.2 1 0 0 1 1 1 0 Enterobacterial EspB protein Shugoshin_N PF07558.11 ORF51943 - 0.05 13.5 0.2 0.14 12.1 0.0 1.7 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region YvrJ PF12841.7 ORF51943 - 0.052 13.1 0.3 0.44 10.1 0.1 2.1 2 0 0 2 2 2 0 YvrJ protein family FtsK_SpoIIIE PF01580.18 ORF51943 - 0.063 12.6 0.1 0.072 12.4 0.1 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family FliD_C PF07195.12 ORF51943 - 0.08 12.3 0.2 0.095 12.1 0.2 1.0 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus Peptidase_S21 PF00716.17 ORF51608 - 0.06 13.0 0.1 0.067 12.9 0.1 1.0 1 0 0 1 1 1 0 Assemblin (Peptidase family S21) zf-RING_4 PF14570.6 ORF50833 - 1.9 8.3 6.1 0.16 11.8 0.9 2.0 3 1 0 3 3 3 0 RING/Ubox like zinc-binding domain TetR_C_12 PF16914.5 ORF50328 - 0.051 13.7 0.0 0.059 13.5 0.0 1.1 1 0 0 1 1 1 0 Bacterial transcriptional repressor C-terminal DUF588 PF04535.12 ORF49872 - 0.068 13.0 0.0 0.068 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF588) Lipoprotein_8 PF02030.15 ORF49077 - 0.0058 15.4 0.4 0.0058 15.4 0.4 1.0 1 0 0 1 1 1 1 Hypothetical lipoprotein (MG045 family) Myosin_TH1 PF06017.13 ORF48900 - 2.2e-10 40.5 2.2 2.3e-10 40.5 2.2 1.0 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding hSac2 PF12456.8 ORF48900 - 0.025 14.3 0.2 0.033 13.9 0.2 1.4 1 1 0 1 1 1 0 Inositol phosphatase Sugar_transport PF06800.12 ORF48900 - 0.055 12.8 0.6 0.063 12.6 0.6 1.1 1 0 0 1 1 1 0 Sugar transport protein WBS_methylT PF12589.8 ORF48900 - 0.058 14.2 0.5 0.073 13.8 0.5 1.1 1 0 0 1 1 1 0 Methyltransferase involved in Williams-Beuren syndrome ubiquitin PF00240.23 ORF48786 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF48786 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF48786 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF48786 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF48786 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF48786 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF48786 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF48786 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF48786 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain Tmemb_161AB PF10268.9 ORF48634 - 0.0033 16.2 0.7 0.0035 16.1 0.7 1.0 1 0 0 1 1 1 1 Predicted transmembrane protein 161AB SpoIIIAH PF12685.7 ORF48419 - 0.19 11.6 1.4 12 5.6 0.1 2.1 2 0 0 2 2 2 0 SpoIIIAH-like protein SMN PF06003.12 ORF48419 - 0.33 10.2 0.7 0.41 9.8 0.7 1.1 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) CH_2 PF06294.11 ORF48354 - 8.2e-05 22.7 0.1 9.6e-05 22.4 0.1 1.1 1 0 0 1 1 1 1 CH-like domain in sperm protein T2SSF PF00482.23 ORF47167 - 0.026 14.5 1.1 0.033 14.2 1.1 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F HNF-1_N PF04814.13 ORF47167 - 0.087 13.4 0.1 0.14 12.7 0.1 1.3 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus LMBR1 PF04791.16 ORF47139 - 0.0084 15.1 2.5 0.0085 15.0 2.5 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein Med7 PF05983.11 ORF46427 - 1.2e-08 35.2 2.9 1.5e-08 35.0 2.9 1.0 1 0 0 1 1 1 1 MED7 protein SPOUT_MTase_2 PF14419.6 ORF46427 - 0.06 12.7 0.3 0.066 12.6 0.3 1.0 1 0 0 1 1 1 0 AF2226-like SPOUT RNA Methylase fused to THUMP Sod_Fe_C PF02777.18 ORF46279 - 0.045 13.9 0.0 0.15 12.3 0.0 1.7 1 1 1 2 2 2 0 Iron/manganese superoxide dismutases, C-terminal domain UPF0253 PF06786.12 ORF46279 - 0.1 12.9 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0253) adh_short PF00106.25 ORF46021 - 7.5e-07 28.8 0.0 8.5e-07 28.6 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF46021 - 0.07 12.7 0.0 0.071 12.7 0.0 1.0 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Gp_dh_C PF02800.20 ORF4583 - 1.5e-11 44.2 0.0 2e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain S4_2 PF13275.6 ORF45822 - 5.4e-24 83.8 0.0 5.8e-24 83.7 0.0 1.0 1 0 0 1 1 1 1 S4 domain S4 PF01479.25 ORF45822 - 0.09 12.5 0.1 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 S4 domain Fusion_F0 PF13044.6 ORF45820 - 0.036 12.7 0.8 0.042 12.5 0.8 1.2 1 0 0 1 1 1 0 Fusion glycoprotein F0, Isavirus ubiquitin PF00240.23 ORF44765 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF44765 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF44765 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF44765 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF44765 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF44765 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF44765 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF44765 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF44765 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain Stealth_CR3 PF17102.5 ORF4467 - 2.9 7.9 5.7 0.34 10.8 1.6 1.6 2 0 0 2 2 2 0 Stealth protein CR3, conserved region 3 DUF3792 PF12670.7 ORF43751 - 0.0045 17.1 0.2 0.0058 16.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3792) ubiquitin PF00240.23 ORF42983 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF42983 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF42983 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF42983 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF42983 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF42983 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF42983 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF42983 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF42983 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain ubiquitin PF00240.23 ORF42709 - 4.9e-34 115.9 0.9 5.4e-34 115.8 0.9 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF42709 - 2.2e-16 59.4 1.4 2.4e-16 59.3 1.4 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF42709 - 5.4e-06 26.8 0.2 2.2e-05 24.8 0.2 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF42709 - 0.00053 20.0 0.4 0.5 10.4 0.1 2.0 2 0 0 2 2 2 2 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF42709 - 0.0011 18.8 0.1 0.0012 18.7 0.1 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF42709 - 0.002 18.2 0.1 0.0044 17.1 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF42709 - 0.0026 18.1 0.1 0.0029 17.9 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF42709 - 0.009 16.6 0.1 0.01 16.4 0.1 1.1 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF42709 - 0.1 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain ubiquitin PF00240.23 ORF42622 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF42622 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF42622 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF42622 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF42622 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF42622 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF42622 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF42622 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF42622 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain RMI1_C PF16099.5 ORF42220 - 0.0079 16.0 0.0 0.0079 16.0 0.0 1.1 1 0 0 1 1 1 1 Recq-mediated genome instability protein 1, C-terminal OB-fold VP7 PF00434.18 ORF41886 - 1.4 8.0 2.9 1.5 7.9 2.9 1.0 1 0 0 1 1 1 0 Glycoprotein VP7 Rab_eff_C PF04698.12 ORF41137 - 0.31 9.3 0.1 0.34 9.1 0.1 1.0 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus Gp_dh_C PF02800.20 ORF40477 - 1.5e-11 44.2 0.0 2e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CitMHS_2 PF16980.5 ORF40407 - 0.018 13.7 0.0 0.02 13.5 0.0 1.0 1 0 0 1 1 1 0 Putative citrate transport DUF3073 PF11273.8 ORF40171 - 0.11 13.3 0.1 0.14 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) V-ATPase_G PF03179.15 ORF40066 - 0.022 15.3 0.1 0.024 15.2 0.1 1.0 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit Peptidase_M4_C PF02868.15 ORF3993 - 0.051 13.4 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 Thermolysin metallopeptidase, alpha-helical domain Sod_Fe_C PF02777.18 ORF39886 - 0.045 13.9 0.0 0.15 12.3 0.0 1.7 1 1 1 2 2 2 0 Iron/manganese superoxide dismutases, C-terminal domain UPF0253 PF06786.12 ORF39886 - 0.1 12.9 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0253) SSXT PF05030.12 ORF39460 - 0.11 12.2 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 SSXT protein (N-terminal region) Ank_4 PF13637.6 ORF3921 - 3.6e-06 27.4 0.5 9.1e-06 26.1 0.2 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF3921 - 5.1e-06 27.0 0.1 5.8e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF3921 - 8.6e-06 25.7 0.7 0.039 14.5 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF3921 - 1.3e-05 25.3 0.4 0.0026 18.1 0.1 1.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF3921 - 0.00046 20.5 0.2 0.022 15.2 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeat CHCH PF06747.13 ORF3921 - 0.029 14.5 0.1 0.067 13.3 0.1 1.6 1 0 0 1 1 1 0 CHCH domain Csd3_N PF18059.1 ORF3921 - 0.067 13.7 0.1 0.24 12.0 0.1 1.8 1 1 1 2 2 2 0 Csd3 N-terminal Asparaginase_C PF17763.1 ORF38811 - 1.3e-05 25.4 0.0 1.5e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain DUF4516 PF14990.6 ORF38406 - 7.2e-09 35.2 1.0 9.3e-09 34.9 1.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4516) E1-E2_ATPase PF00122.20 ORF38184 - 0.42 10.1 2.1 0.36 10.3 1.2 1.5 1 1 1 2 2 2 0 E1-E2 ATPase Gly-zipper_YMGG PF13441.6 ORF37991 - 4e-09 36.1 52.0 6.7e-06 25.7 16.3 2.3 1 1 1 2 2 2 2 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 ORF37991 - 8.4e-06 25.7 36.6 0.0019 18.2 17.9 2.1 1 1 1 2 2 2 2 Glycine zipper Gly-zipper_OmpA PF13436.6 ORF37991 - 0.0002 21.1 35.6 0.017 14.9 15.8 2.9 1 1 2 3 3 3 3 Glycine-zipper domain Rick_17kDa_Anti PF05433.15 ORF37991 - 0.0084 15.9 40.9 0.062 13.2 19.6 2.8 1 1 1 2 2 2 2 Glycine zipper 2TM domain DUF456 PF04306.13 ORF37991 - 0.38 11.0 11.1 0.62 10.4 11.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF456) Romo1 PF10247.9 ORF37991 - 0.53 10.7 20.4 0.5 10.8 2.4 3.1 2 1 1 3 3 3 0 Reactive mitochondrial oxygen species modulator 1 DUF1269 PF06897.12 ORF37991 - 2 8.8 21.5 0.18 12.1 8.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1269) FAS_N PF17828.1 ORF37802 - 0.047 13.7 0.1 0.052 13.6 0.1 1.1 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta DUF3687 PF12459.8 ORF37140 - 0.062 12.8 0.1 0.089 12.3 0.1 1.2 1 0 0 1 1 1 0 D-Ala-teichoic acid biosynthesis protein TMEM107 PF14995.6 ORF36913 - 0.00097 19.6 0.4 0.00099 19.5 0.4 1.1 1 0 0 1 1 1 1 Transmembrane protein eIF3g PF12353.8 ORF36553 - 0.035 14.5 0.4 0.038 14.4 0.4 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit G Tmemb_55A PF09788.9 ORF36553 - 0.084 11.9 0.1 0.093 11.8 0.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A Cytadhesin_P30 PF07271.11 ORF35904 - 1.1 8.7 12.7 1.2 8.6 12.7 1.2 1 0 0 1 1 1 0 Cytadhesin P30/P32 FNIP PF05725.12 ORF35693 - 7e-19 67.7 9.1 1.2e-10 41.4 2.0 2.1 2 0 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 ORF35693 - 0.0036 17.3 0.2 0.0043 17.0 0.2 1.2 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) Glyco_hydro_65C PF03633.15 ORF35693 - 0.0094 15.8 0.2 4.1 7.4 0.0 3.1 3 0 0 3 3 3 1 Glycosyl hydrolase family 65, C-terminal domain SHIRT PF18655.1 ORF35693 - 0.09 13.4 0.1 26 5.5 0.0 2.8 1 1 1 2 2 2 0 SHIRT domain LRR_11 PF18831.1 ORF35693 - 1.1 8.9 10.3 19 4.9 0.2 3.6 3 0 0 3 3 3 0 Leucine-rich repeat DUF4380 PF14315.6 ORF35538 - 0.053 12.4 0.0 0.056 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4380) MauJ PF17419.2 ORF35538 - 0.13 11.7 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Methylamine utilization protein MauJ Sensor_TM1 PF13755.6 ORF35405 - 0.024 14.3 0.1 0.043 13.5 0.1 1.4 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain Herpes_teg_N PF04843.12 ORF35405 - 0.21 11.2 2.3 0.26 11.0 2.3 1.3 1 0 0 1 1 1 0 Herpesvirus tegument protein, N-terminal conserved region Lenti_VIF_2 PF07401.12 ORF34984 - 0.085 12.2 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein IMP2_C PF18591.1 ORF34448 - 0.11 12.4 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Immune Mapped Protein 2 (IMP2) C-terminal domain Kinesin PF00225.23 ORF3409 - 9.3e-21 74.1 0.1 9.9e-21 74.0 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Neurensin PF14927.6 ORF33871 - 0.054 13.2 0.0 0.059 13.1 0.0 1.1 1 0 0 1 1 1 0 Neurensin PKD_channel PF08016.12 ORF33831 - 7.5e-06 24.9 0.9 7.7e-06 24.8 0.9 1.0 1 0 0 1 1 1 1 Polycystin cation channel COX2_TM PF02790.15 ORF33559 - 0.033 14.3 1.2 0.036 14.2 1.2 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain DUF1251 PF06856.11 ORF33065 - 0.015 15.0 0.1 0.016 14.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1251) Pox_A14 PF05767.12 ORF33033 - 0.054 13.6 0.1 0.059 13.5 0.1 1.1 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 Glyco_hydro_63 PF03200.16 ORF32711 - 9.4e-13 47.7 0.0 1e-12 47.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 63 C-terminal domain Pico_P2B PF01552.17 ORF32692 - 0.052 13.7 0.0 0.063 13.4 0.0 1.2 1 0 0 1 1 1 0 Picornavirus 2B protein IQ PF00612.27 ORF32215 - 0.04 13.7 0.3 0.04 13.7 0.3 2.3 2 0 0 2 2 2 0 IQ calmodulin-binding motif Insulin_TMD PF17870.1 ORF32109 - 0.0014 18.7 0.6 0.0019 18.2 0.6 1.2 1 0 0 1 1 1 1 Insulin receptor trans-membrane segment LRR19-TM PF15176.6 ORF32109 - 0.0047 16.9 0.0 0.0063 16.5 0.0 1.2 1 0 0 1 1 1 1 Leucine-rich repeat family 19 TM domain COX4 PF02936.14 ORF32109 - 0.016 15.3 0.0 0.02 14.9 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV DUF2852 PF11014.8 ORF32109 - 0.018 15.2 0.0 0.019 15.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) EphA2_TM PF14575.6 ORF32109 - 0.06 14.2 0.1 0.085 13.8 0.1 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain SPC12 PF06645.13 ORF32109 - 0.094 12.8 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Syndecan PF01034.20 ORF32109 - 0.29 11.1 1.7 0.62 10.0 1.7 1.5 1 0 0 1 1 1 0 Syndecan domain zf-RRN7 PF11781.8 ORF31769 - 0.037 13.7 0.6 0.065 12.9 0.6 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Nitroreductase PF00881.24 ORF31736 - 8.6e-09 35.7 0.0 1e-08 35.4 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 ORF31736 - 7.1e-06 25.8 0.0 7.7e-06 25.6 0.0 1.0 1 0 0 1 1 1 1 Putative TM nitroreductase IMP2_C PF18591.1 ORF3166 - 0.11 12.4 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Immune Mapped Protein 2 (IMP2) C-terminal domain Peptidase_M24 PF00557.24 ORF31130 - 0.0006 19.6 0.0 0.00065 19.5 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 Peroxin-13_N PF04088.13 ORF30895 - 0.3 11.4 9.1 0.31 11.3 9.1 1.0 1 0 0 1 1 1 0 Peroxin 13, N-terminal region DUF724 PF05266.14 ORF30895 - 3.5 7.4 16.0 4 7.2 16.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) B277 PF17623.2 ORF30895 - 4.2 6.4 15.6 4.4 6.3 15.6 1.1 1 0 0 1 1 1 0 Domain of unknown function MORN PF02493.20 ORF30884 - 3.3e-08 33.0 13.0 7.3e-05 22.4 3.9 3.2 3 0 0 3 3 3 3 MORN repeat DUF448 PF04296.13 ORF30884 - 0.12 12.3 0.2 0.3 11.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF448) ubiquitin PF00240.23 ORF30422 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF30422 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF30422 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF30422 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF30422 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF30422 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF30422 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF30422 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF30422 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain TMF_DNA_bd PF12329.8 ORF30419 - 0.0011 19.0 0.2 0.0016 18.4 0.2 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding Kinesin PF00225.23 ORF30419 - 0.014 14.3 0.1 0.025 13.5 0.0 1.4 2 0 0 2 2 2 0 Kinesin motor domain DUF4988 PF16378.5 ORF30419 - 0.061 13.0 0.3 0.11 12.1 0.1 1.5 1 1 1 2 2 2 0 Domain of unknown function Kinesin_assoc PF16183.5 ORF30419 - 0.069 13.3 0.1 0.087 13.0 0.1 1.2 1 0 0 1 1 1 0 Kinesin-associated Rad50_zn_hook PF04423.14 ORF30419 - 0.094 12.6 1.1 0.16 11.9 1.1 1.5 1 1 0 1 1 1 0 Rad50 zinc hook motif DUF4235 PF14019.6 ORF30305 - 0.13 12.4 0.1 0.14 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4235) IspA PF04279.15 ORF30160 - 0.015 15.5 0.3 0.016 15.4 0.3 1.0 1 0 0 1 1 1 0 Intracellular septation protein A U-box PF04564.15 ORF30047 - 6.7e-13 48.6 0.1 8e-13 48.4 0.1 1.1 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 ORF30047 - 0.025 14.4 0.2 0.17 11.7 0.1 2.2 2 1 1 3 3 3 0 Zinc-finger of the MIZ type in Nse subunit Herpes_LMP1 PF05297.11 ORF29636 - 4.6 6.3 4.3 4.8 6.3 4.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) GWT1 PF06423.12 ORF29243 - 0.16 12.1 4.5 0.19 11.8 4.5 1.3 1 1 0 1 1 1 0 GWT1 DUF3678 PF12435.8 ORF29108 - 0.13 11.7 3.4 0.29 10.6 3.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) DUF730 PF05325.11 ORF28990 - 0.022 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF730) DUF4219 PF13961.6 ORF27341 - 0.071 12.8 0.4 0.12 12.1 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4219) DUF730 PF05325.11 ORF27299 - 0.022 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF730) DUF1978 PF09321.10 ORF25286 - 0.18 11.1 0.0 0.19 11.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1978) p25-alpha PF05517.12 ORF24401 - 0.0054 16.9 0.4 0.046 13.9 0.4 1.9 1 1 0 1 1 1 1 p25-alpha Sulphotransf PF09037.10 ORF24401 - 0.0096 15.5 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 1 Stf0 sulphotransferase EF-hand_1 PF00036.32 ORF24401 - 0.27 10.9 0.1 0.27 10.9 0.1 2.1 3 0 0 3 3 3 0 EF hand Gene66 PF02053.15 ORF23788 - 0.066 12.8 0.2 0.081 12.6 0.2 1.0 1 0 0 1 1 1 0 Gene 66 (IR5) protein RPN2_C PF18004.1 ORF23695 - 0.022 14.7 2.1 0.026 14.4 2.1 1.0 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain zf-H2C2_2 PF13465.6 ORF23530 - 6.5e-10 39.0 9.8 1.2e-08 35.0 1.0 3.3 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF23530 - 1.5e-08 34.6 9.8 3.5e-06 27.2 1.7 2.6 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF23530 - 1.7e-07 31.5 5.7 0.00017 22.1 1.2 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF23530 - 5.4e-05 23.4 2.0 6.2e-05 23.2 2.0 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF23530 - 0.0026 18.1 2.7 0.012 15.9 0.3 2.6 2 1 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF23530 - 0.01 15.6 0.1 0.01 15.6 0.1 1.5 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF23530 - 0.032 14.5 0.2 0.032 14.5 0.2 2.8 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-C2H2_aberr PF17017.5 ORF23530 - 0.07 13.3 0.4 0.07 13.3 0.4 2.0 1 1 0 2 2 2 0 Aberrant zinc-finger Zn-ribbon_8 PF09723.10 ORF23530 - 0.13 12.4 1.9 0.79 9.9 0.3 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF23530 - 0.13 12.3 9.5 0.23 11.5 5.6 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger C1_1 PF00130.22 ORF23530 - 0.17 11.8 6.4 0.43 10.5 2.8 2.6 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-H2C2_5 PF13909.6 ORF23530 - 0.22 11.3 10.4 0.32 10.8 6.3 2.8 2 1 0 2 2 2 0 C2H2-type zinc-finger domain zf-C2HC_2 PF13913.6 ORF23530 - 0.22 11.4 5.6 10 6.1 0.1 2.8 2 1 0 2 2 2 0 zinc-finger of a C2HC-type Glyco_trans_1_4 PF13692.6 ORF22818 - 0.0039 17.6 0.0 0.0041 17.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 zf-C4 PF00105.18 ORF22564 - 0.036 14.5 2.5 0.05 14.1 2.5 1.3 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) Cyclin_C PF02984.19 ORF22529 - 0.0075 16.3 0.0 0.011 15.9 0.0 1.3 1 1 0 1 1 1 1 Cyclin, C-terminal domain DUF2384 PF09722.10 ORF22314 - 0.09 12.8 0.2 0.15 12.1 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2384) RBR PF17208.3 ORF21648 - 0.037 14.7 5.4 0.16 12.7 5.4 1.9 1 1 0 1 1 1 0 RNA binding Region HGD-D PF06050.13 ORF21552 - 0.038 13.8 0.1 0.038 13.8 0.1 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component EF-hand_1 PF00036.32 ORF21411 - 0.00064 19.1 0.7 0.0015 17.9 0.7 1.7 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF21411 - 0.00098 18.9 0.4 0.0019 18.0 0.4 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF21411 - 0.0012 19.3 0.4 0.0012 19.3 0.4 1.5 2 0 0 2 2 2 1 EF-hand domain pair Podovirus_Gp16 PF05894.12 ORF21411 - 0.0049 16.4 0.8 0.0061 16.1 0.8 1.1 1 0 0 1 1 1 1 Podovirus DNA encapsidation protein (Gp16) EF-hand_6 PF13405.6 ORF21411 - 0.01 15.7 0.2 0.01 15.7 0.2 2.0 2 0 0 2 2 2 0 EF-hand domain ubiquitin PF00240.23 ORF21346 - 0.0023 17.6 0.0 0.0027 17.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF21346 - 0.0063 16.3 0.0 0.0069 16.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ub-Mut7C PF14451.6 ORF21346 - 0.16 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Mut7-C ubiquitin BBS2_C PF14782.6 ORF21324 - 0.039 12.7 0.0 0.039 12.7 0.0 1.0 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, C-terminal Ku_C PF03730.14 ORF21290 - 6e-14 52.5 0.0 6.7e-14 52.3 0.0 1.0 1 0 0 1 1 1 1 Ku70/Ku80 C-terminal arm DUF2207 PF09972.9 ORF21018 - 9.6 4.8 5.6 11 4.7 5.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ank_4 PF13637.6 ORF20123 - 3.6e-06 27.4 0.5 9.1e-06 26.1 0.2 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF20123 - 5.1e-06 27.0 0.1 5.8e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF20123 - 8.6e-06 25.7 0.7 0.039 14.5 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF20123 - 1.3e-05 25.3 0.4 0.0026 18.1 0.1 1.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF20123 - 0.00046 20.5 0.2 0.022 15.2 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeat CHCH PF06747.13 ORF20123 - 0.029 14.5 0.1 0.067 13.3 0.1 1.6 1 0 0 1 1 1 0 CHCH domain Csd3_N PF18059.1 ORF20123 - 0.067 13.7 0.1 0.24 12.0 0.1 1.8 1 1 1 2 2 2 0 Csd3 N-terminal DUF3039 PF11238.8 ORF19822 - 0.088 12.6 0.1 0.12 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3039) DUF2647 PF10839.8 ORF19608 - 0.073 13.1 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2647) LAT PF15234.6 ORF19450 - 0.22 11.2 2.1 0.26 11.0 2.1 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells ubiquitin PF00240.23 ORF19417 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF19417 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF19417 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF19417 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF19417 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF19417 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF19417 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF19417 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF19417 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain V-SNARE PF05008.15 ORF18987 - 7e-06 26.3 0.3 1.2e-05 25.6 0.3 1.5 1 1 0 1 1 1 1 Vesicle transport v-SNARE protein N-terminus DHR10 PF18595.1 ORF18987 - 0.14 12.3 0.2 4 7.5 0.0 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain TPR_1 PF00515.28 ORF18961 - 3.4e-09 36.1 0.1 0.00098 18.9 0.2 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF18961 - 4.5e-09 35.8 0.0 0.0014 18.7 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF18961 - 5.5e-08 32.3 0.0 0.0022 18.0 0.2 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF18961 - 1.6e-07 31.2 0.0 6.9e-05 23.0 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF18961 - 4.7e-05 23.6 0.4 0.0022 18.2 0.1 2.0 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF18961 - 0.00028 21.5 0.0 0.00036 21.1 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF18961 - 0.0062 16.2 3.7 4.5 7.1 0.0 3.4 2 1 1 3 3 3 2 TPR repeat TPR_19 PF14559.6 ORF18961 - 0.015 15.8 0.1 0.022 15.2 0.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Coatomer_WDAD PF04053.14 ORF18961 - 0.018 14.1 0.0 0.019 14.0 0.0 1.1 1 0 0 1 1 1 0 Coatomer WD associated region DUF5112 PF17139.4 ORF18961 - 0.044 13.3 0.1 0.057 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5112) nos_propeller PF18764.1 ORF18961 - 0.066 13.1 0.0 0.089 12.7 0.0 1.3 1 1 0 1 1 1 0 Nitrous oxide reductase propeller repeat TPR_9 PF13371.6 ORF18961 - 0.18 12.0 0.0 0.34 11.1 0.0 1.5 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF18961 - 0.18 11.7 0.8 0.4 10.6 0.4 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat AFG1_ATPase PF03969.16 ORF18951 - 1.3e-31 109.9 1.2 1.4e-31 109.7 1.2 1.0 1 0 0 1 1 1 1 AFG1-like ATPase UBN_AB PF14075.6 ORF18623 - 0.0041 16.9 0.5 0.0042 16.8 0.5 1.1 1 0 0 1 1 1 1 Ubinuclein conserved middle domain Pox_A14 PF05767.12 ORF18609 - 0.034 14.3 0.2 0.037 14.2 0.2 1.2 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 APP_E2 PF12925.7 ORF18282 - 0.0064 16.2 1.5 0.0069 16.1 1.5 1.1 1 0 0 1 1 1 1 E2 domain of amyloid precursor protein GBR_NSP5 PF17580.2 ORF18282 - 0.02 14.7 4.6 0.02 14.7 4.6 1.1 1 0 0 1 1 1 0 Group B Rotavirus Non-structural protein 5 cEGF PF12662.7 ORF18096 - 0.26 11.2 0.5 0.39 10.7 0.0 1.5 2 0 0 2 2 2 0 Complement Clr-like EGF-like Peptidase_M26_N PF05342.14 ORF1804 - 0.034 13.5 0.1 0.036 13.5 0.1 1.1 1 0 0 1 1 1 0 M26 IgA1-specific Metallo-endopeptidase N-terminal region ARL2_Bind_BART PF11527.8 ORF17708 - 2e-05 24.7 0.1 2.3e-05 24.5 0.1 1.1 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART CART PF06373.11 ORF17576 - 0.074 13.2 0.2 0.12 12.5 0.2 1.4 1 1 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) PRA1 PF03208.19 ORF16704 - 0.15 11.7 5.1 0.16 11.6 5.1 1.0 1 0 0 1 1 1 0 PRA1 family protein DUF5492 PF17596.2 ORF16501 - 0.085 13.2 2.4 0.097 13.0 2.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5492) YhfC PF10086.9 ORF16379 - 0.13 11.6 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 YhfC intramembrane metalloprotease Glyco_tranf_2_4 PF13704.6 ORF16354 - 0.009 16.5 0.0 0.0097 16.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 ApbA PF02558.16 ORF1629 - 0.036 13.7 0.0 0.041 13.5 0.0 1.0 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA AC_N PF16214.5 ORF15961 - 0.19 10.8 0.6 0.19 10.8 0.6 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Proton_antipo_N PF00662.20 ORF15961 - 1.6 8.8 7.0 3.1 8.0 7.0 1.6 1 1 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YesK PF14150.6 ORF15943 - 0.073 13.3 0.7 0.073 13.3 0.7 1.7 2 0 0 2 2 2 0 YesK-like protein zf-H2C2_2 PF13465.6 ORF15492 - 6.5e-10 39.0 9.8 1.2e-08 35.0 1.0 3.3 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF15492 - 1.5e-08 34.6 9.8 3.5e-06 27.2 1.7 2.6 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF15492 - 1.7e-07 31.5 5.7 0.00017 22.1 1.2 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF15492 - 5.4e-05 23.4 2.0 6.2e-05 23.2 2.0 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF15492 - 0.0026 18.1 2.7 0.012 15.9 0.3 2.6 2 1 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF15492 - 0.01 15.6 0.1 0.01 15.6 0.1 1.5 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF15492 - 0.032 14.5 0.2 0.032 14.5 0.2 2.8 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-C2H2_aberr PF17017.5 ORF15492 - 0.07 13.3 0.4 0.07 13.3 0.4 2.0 1 1 0 2 2 2 0 Aberrant zinc-finger Zn-ribbon_8 PF09723.10 ORF15492 - 0.13 12.4 1.9 0.79 9.9 0.3 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF15492 - 0.13 12.3 9.5 0.23 11.5 5.6 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger C1_1 PF00130.22 ORF15492 - 0.17 11.8 6.4 0.43 10.5 2.8 2.6 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-H2C2_5 PF13909.6 ORF15492 - 0.22 11.3 10.4 0.32 10.8 6.3 2.8 2 1 0 2 2 2 0 C2H2-type zinc-finger domain zf-C2HC_2 PF13913.6 ORF15492 - 0.22 11.4 5.6 10 6.1 0.1 2.8 2 1 0 2 2 2 0 zinc-finger of a C2HC-type DUF2917 PF11142.8 ORF14621 - 0.093 12.1 0.0 0.17 11.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2917) DUF445 PF04286.12 ORF1422 - 0.13 12.1 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) ERG2_Sigma1R PF04622.12 ORF1422 - 0.14 11.4 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 ERG2 and Sigma1 receptor like protein Pkinase PF00069.25 ORF1383 - 1.9e-11 43.8 0.0 2.3e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF1383 - 6.7e-06 25.6 0.0 7.4e-06 25.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF1383 - 0.0017 17.7 0.0 0.002 17.5 0.0 1.0 1 0 0 1 1 1 1 Kinase-like RabGAP-TBC PF00566.18 ORF13348 - 0.24 11.0 3.8 0.27 10.9 3.8 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain A_deaminase_N PF08451.11 ORF12786 - 0.0088 16.3 0.2 0.0096 16.2 0.2 1.3 1 0 0 1 1 1 1 Adenosine/AMP deaminase N-terminal TetR_C_12 PF16914.5 ORF12218 - 0.11 12.6 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Bacterial transcriptional repressor C-terminal DUF1979 PF09322.10 ORF12218 - 0.2 11.6 0.1 1.2 9.0 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1979) HGD-D PF06050.13 ORF12143 - 0.038 13.8 0.1 0.038 13.8 0.1 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component sCache_like PF16736.5 ORF11809 - 0.0063 16.6 1.1 0.0065 16.5 1.1 1.1 1 0 0 1 1 1 1 Single Cache-like DUF3459 PF11941.8 ORF11733 - 0.042 14.2 0.1 0.048 14.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3459) DUF4707 PF15806.5 ORF11507 - 0.019 14.0 0.1 0.02 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4707) Baculo_p24 PF05073.12 ORF11507 - 0.045 13.5 0.3 0.049 13.4 0.3 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein PBP1_TM PF14812.6 ORF112569 - 0.018 15.4 4.2 0.022 15.1 4.2 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Cytochrom_B559 PF00283.19 ORF112516 - 3e-07 29.8 1.2 4.7e-07 29.1 1.2 1.3 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Cytochrom_B559a PF00284.20 ORF112516 - 0.004 16.9 0.0 0.0063 16.2 0.0 1.3 1 0 0 1 1 1 1 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit PBP3 PF18056.1 ORF112134 - 0.092 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Penicillin Binding Protein 3 Domain Scaffolding_pro PF11418.8 ORF111505 - 0.041 14.5 0.0 0.052 14.1 0.0 1.1 1 0 0 1 1 1 0 Phi29 scaffolding protein DivIC PF04977.15 ORF111505 - 0.057 13.2 0.1 0.08 12.7 0.1 1.3 1 0 0 1 1 1 0 Septum formation initiator Halogen_Hydrol PF10112.9 ORF111273 - 0.0005 20.2 0.8 0.00054 20.0 0.8 1.1 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein PriC PF07445.12 ORF111273 - 0.019 14.9 0.2 0.022 14.7 0.2 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC Remorin_C PF03763.13 ORF111273 - 0.03 14.2 2.1 0.037 13.9 2.1 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region MetOD2 PF18548.1 ORF111273 - 0.075 13.2 2.1 0.16 12.1 2.1 1.7 1 1 0 1 1 1 0 Metanogen output domain 2 HTH_Tnp_Tc3_1 PF11427.8 ORF111273 - 0.085 12.7 0.3 0.21 11.4 0.1 1.6 1 1 1 2 2 2 0 Tc3 transposase MHC2-interact PF09307.10 ORF111269 - 0.058 13.4 1.0 0.058 13.4 1.0 1.7 1 1 1 2 2 2 0 CLIP, MHC2 interacting YvrJ PF12841.7 ORF111269 - 0.12 12.0 0.2 0.2 11.2 0.2 1.4 1 0 0 1 1 1 0 YvrJ protein family PKD_channel PF08016.12 ORF110492 - 7.5e-06 24.9 0.9 7.7e-06 24.8 0.9 1.0 1 0 0 1 1 1 1 Polycystin cation channel CHCH PF06747.13 ORF110057 - 0.045 13.9 1.4 0.045 13.9 1.4 1.8 2 0 0 2 2 2 0 CHCH domain Atg14 PF10186.9 ORF109985 - 1.6 7.8 13.1 1.8 7.6 13.1 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DCA16 PF15349.6 ORF109726 - 0.05 13.1 2.5 0.055 13.0 2.5 1.0 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 SIMPL PF04402.14 ORF109665 - 0.0016 18.9 0.2 0.0017 18.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF541) SVIP PF15811.5 ORF109665 - 0.045 14.2 8.1 0.067 13.7 8.1 1.4 1 1 0 1 1 1 0 Small VCP/p97-interacting protein DUF2934 PF11154.8 ORF109488 - 0.071 12.8 0.3 0.11 12.2 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2934) BmKX PF09132.10 ORF109217 - 0.09 12.8 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 BmKX Sec5 PF15469.6 ORF109195 - 0.028 14.2 0.8 0.056 13.3 0.5 1.5 1 1 1 2 2 2 0 Exocyst complex component Sec5 DUF569 PF04601.13 ORF109121 - 0.015 15.0 0.0 0.015 15.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF569) FdhE PF04216.12 ORF109121 - 0.072 13.0 0.1 0.072 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation CDV3 PF15359.6 ORF108602 - 0.011 16.2 1.7 0.012 16.1 1.7 1.0 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 TMEM239 PF15841.5 ORF107869 - 0.11 12.4 3.5 0.12 12.3 3.5 1.0 1 0 0 1 1 1 0 Transmembrane protein 239 family zf-RRN7 PF11781.8 ORF107853 - 0.037 13.7 0.6 0.065 12.9 0.6 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 GSHPx PF00255.19 ORF107412 - 0.0032 17.0 0.2 0.0082 15.7 0.1 1.7 2 0 0 2 2 2 1 Glutathione peroxidase Ureidogly_lyase PF04115.12 ORF106757 - 6.7e-21 74.9 0.0 7.4e-21 74.8 0.0 1.0 1 0 0 1 1 1 1 Ureidoglycolate lyase Halogen_Hydrol PF10112.9 ORF106588 - 0.0005 20.2 0.8 0.00054 20.0 0.8 1.1 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein PriC PF07445.12 ORF106588 - 0.019 14.9 0.2 0.022 14.7 0.2 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC Remorin_C PF03763.13 ORF106588 - 0.03 14.2 2.1 0.037 13.9 2.1 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region MetOD2 PF18548.1 ORF106588 - 0.075 13.2 2.1 0.16 12.1 2.1 1.7 1 1 0 1 1 1 0 Metanogen output domain 2 HTH_Tnp_Tc3_1 PF11427.8 ORF106588 - 0.085 12.7 0.3 0.21 11.4 0.1 1.6 1 1 1 2 2 2 0 Tc3 transposase Glu_synthase PF01645.17 ORF10650 - 0.23 10.6 2.1 0.25 10.4 2.1 1.0 1 0 0 1 1 1 0 Conserved region in glutamate synthase PUMA PF15826.5 ORF106448 - 0.46 10.6 3.4 1.1 9.5 3.4 1.6 1 1 0 1 1 1 0 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis Pkinase_Tyr PF07714.17 ORF105854 - 9.1e-12 44.8 0.0 9.7e-12 44.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF105854 - 3.5e-11 43.0 0.0 3.6e-11 42.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain GerPE PF10970.8 ORF105622 - 0.0058 16.8 0.5 0.0069 16.6 0.5 1.1 1 0 0 1 1 1 1 Spore germination protein GerPE Pkinase PF00069.25 ORF105599 - 1.9e-11 43.8 0.0 2.3e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105599 - 6.7e-06 25.6 0.0 7.4e-06 25.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF105599 - 0.0017 17.7 0.0 0.002 17.5 0.0 1.0 1 0 0 1 1 1 1 Kinase-like DUF4947 PF16305.5 ORF105252 - 0.099 12.6 0.3 0.11 12.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4947) DUF3792 PF12670.7 ORF104283 - 0.0045 17.1 0.2 0.0058 16.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3792) NUDIX PF00293.28 ORF10417 - 0.034 14.2 0.1 0.034 14.2 0.1 1.2 1 0 0 1 1 1 0 NUDIX domain SUB1_ProdP9 PF18213.1 ORF104163 - 0.00098 18.9 0.9 0.0011 18.7 0.9 1.2 1 0 0 1 1 1 1 SUB1 protease Prodomain ProdP9 EF-hand_8 PF13833.6 ORF104163 - 0.046 13.6 0.7 0.092 12.6 0.3 1.7 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF104163 - 0.053 13.5 0.4 1 9.5 0.2 2.9 2 1 0 2 2 2 0 EF-hand domain DUF3008 PF11450.8 ORF104163 - 0.1 12.8 0.8 0.17 12.1 0.8 1.4 1 0 0 1 1 1 0 Protein of unknwon function (DUF3008) Cytochrom_B559 PF00283.19 ORF103673 - 3e-07 29.8 1.2 4.7e-07 29.1 1.2 1.3 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Cytochrom_B559a PF00284.20 ORF103673 - 0.004 16.9 0.0 0.0063 16.2 0.0 1.3 1 0 0 1 1 1 1 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit DUF1664 PF07889.12 ORF103480 - 0.12 12.4 4.1 0.29 11.2 2.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) ISG65-75 PF11727.8 ORF103480 - 0.19 10.9 3.6 0.2 10.9 3.6 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein Nab2p_Zf1 PF18260.1 ORF10320 - 0.021 14.7 1.4 0.028 14.3 0.6 1.6 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 Transferrin PF00405.17 ORF102726 - 0.019 14.2 0.1 0.021 14.0 0.1 1.0 1 0 0 1 1 1 0 Transferrin Prion_bPrPp PF11587.8 ORF101961 - 0.082 12.8 0.2 0.082 12.8 0.2 1.8 2 0 0 2 2 2 0 Major prion protein bPrPp - N terminal ubiquitin PF00240.23 ORF101949 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF101949 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF101949 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF101949 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF101949 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF101949 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF101949 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF101949 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF101949 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain DUF5443 PF17518.2 ORF101911 - 0.007 15.4 0.2 0.007 15.4 0.2 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5443) Baculo_LEF5 PF04838.12 ORF101911 - 0.046 13.8 2.8 0.27 11.2 0.5 2.0 1 1 1 2 2 2 0 Baculoviridae late expression factor 5 Col_cuticle_N PF01484.17 ORF101605 - 0.16 12.0 0.2 0.29 11.2 0.1 1.5 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain ubiquitin PF00240.23 ORF101554 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF101554 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF101554 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF101554 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF101554 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF101554 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF101554 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF101554 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF101554 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain DUF3173 PF11372.8 ORF100385 - 0.03 14.2 0.0 0.04 13.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3173) TB2_DP1_HVA22 PF03134.19 ORF10020 - 0.086 12.8 4.2 0.14 12.1 4.2 1.3 1 0 0 1 1 1 0 TB2/DP1, HVA22 family ABC_tran_Xtn PF12848.7 ORF100088 - 0.067 13.2 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_21 PF13304.6 ORF100088 - 0.082 12.7 0.1 0.1 12.4 0.1 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system PhetRS_B1 PF18262.1 ORF100088 - 0.12 12.6 0.0 0.4 10.9 0.0 1.7 2 0 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain RNA_replicase_B PF03431.13 NODE_70044_length_226_cov_0.832461_g62103_i0reverse_frame_1 - 8.1 4.8 10.1 8.1 4.8 10.1 1.0 1 0 0 1 1 1 0 RNA replicase, beta-chain Pentapeptide_3 PF13576.6 NODE_70042_length_226_cov_0.832461_g62101_i0forward_frame_1 - 0.06 13.5 0.1 0.076 13.2 0.1 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) GrpE PF01025.19 NODE_70016_length_226_cov_1.146597_g62075_i0reverse_frame_1 - 0.016 14.9 0.0 0.028 14.1 0.0 1.3 1 1 0 1 1 1 0 GrpE Trefoil PF00088.18 NODE_70016_length_226_cov_1.146597_g62075_i0reverse_frame_1 - 0.026 14.4 0.4 0.065 13.1 0.4 1.8 1 1 0 1 1 1 0 Trefoil (P-type) domain TMEMspv1-c74-12 PF11044.8 NODE_70016_length_226_cov_1.146597_g62075_i0forward_frame_1 - 0.39 10.7 3.6 0.67 10.0 3.6 1.3 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF865 PF05906.11 NODE_70015_length_226_cov_1.151832_g62074_i0forward_frame_1 - 7.7 6.4 8.1 5.8 6.8 3.2 2.2 2 0 0 2 2 2 0 Herpesvirus-7 repeat of unknown function (DUF865) DUF3464 PF11947.8 NODE_70011_length_226_cov_1.167539_g62070_i0reverse_frame_1 - 0.71 9.6 3.3 1 9.1 3.0 1.5 1 1 0 1 1 1 0 Photosynthesis affected mutant 68 Lamprin PF06403.11 NODE_70010_length_226_cov_1.172775_g62069_i0forward_frame_1 - 0.12 12.3 7.9 0.15 12.0 7.9 1.3 1 1 0 1 1 1 0 Lamprin DUF2654 PF10849.8 NODE_70009_length_226_cov_1.178010_g62068_i0forward_frame_1 - 0.13 12.5 3.5 0.18 12.1 3.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2654) Competence PF03772.16 NODE_70008_length_226_cov_1.183246_g62067_i0forward_frame_1 - 0.024 13.9 3.7 0.027 13.8 3.7 1.1 1 0 0 1 1 1 0 Competence protein DiS_P_DiS PF06750.13 NODE_70007_length_226_cov_1.188482_g62066_i0forward_frame_1 - 0.018 15.1 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain zf-Tim10_DDP PF02953.15 NODE_70004_length_226_cov_1.235602_g62063_i0forward_frame_1 - 0.034 13.8 0.2 0.043 13.5 0.2 1.4 1 1 0 1 1 1 0 Tim10/DDP family zinc finger DUF1314 PF07013.11 NODE_70003_length_226_cov_1.246073_g62062_i0forward_frame_1 - 0.12 12.2 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1314) HIF-1a_CTAD PF08778.10 NODE_69997_length_226_cov_1.256545_g62056_i0forward_frame_1 - 0.11 12.1 0.1 0.42 10.3 0.0 1.9 2 0 0 2 2 2 0 HIF-1 alpha C terminal transactivation domain Hydrolase_6 PF13344.6 NODE_69992_length_226_cov_1.256545_g62051_i0reverse_frame_1 - 0.2 11.8 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase CbtA_toxin PF06755.12 NODE_69991_length_226_cov_1.272251_g62050_i0forward_frame_1 - 0.0037 17.3 0.0 0.004 17.2 0.0 1.0 1 0 0 1 1 1 1 CbtA_toxin of type IV toxin-antitoxin system DUF2768 PF10966.8 NODE_69989_length_226_cov_1.282723_g62048_i0forward_frame_1 - 0.35 11.3 5.2 1 9.8 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2768) DUF4722 PF15849.5 NODE_69987_length_226_cov_1.319372_g62046_i0forward_frame_1 - 0.034 13.9 0.1 0.037 13.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4722) Ribosomal_S10 PF00338.22 NODE_69987_length_226_cov_1.319372_g62046_i0forward_frame_1 - 0.094 13.0 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S10p/S20e XylR_N PF06505.11 NODE_69966_length_226_cov_1.554974_g62025_i0reverse_frame_1 - 0.01 15.6 0.0 0.023 14.4 0.0 1.5 2 0 0 2 2 2 0 Activator of aromatic catabolism Vma12 PF11712.8 NODE_69964_length_226_cov_1.575916_g62023_i0reverse_frame_1 - 0.06 13.4 2.6 0.064 13.3 2.6 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase CIMR PF00878.18 NODE_69962_length_226_cov_1.602094_g62021_i0forward_frame_1 - 0.099 12.7 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 Cation-independent mannose-6-phosphate receptor repeat ABC_tran_CTD PF16326.5 NODE_69958_length_226_cov_1.633508_g62017_i0forward_frame_1 - 0.00073 19.7 0.9 0.00091 19.4 0.9 1.3 1 0 0 1 1 1 1 ABC transporter C-terminal domain XhlA PF10779.9 NODE_69958_length_226_cov_1.633508_g62017_i0forward_frame_1 - 0.43 10.8 6.0 0.32 11.2 1.9 1.9 1 1 0 2 2 2 0 Haemolysin XhlA TPR_2 PF07719.17 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 3.7e-07 29.8 0.5 7.6e-07 28.8 0.4 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 5.6e-07 29.1 1.0 1.1e-06 28.1 0.7 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 4.5e-06 26.4 0.3 8.6e-06 25.6 0.3 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 1.8e-05 25.1 0.1 2.6e-05 24.7 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 3.2e-05 24.0 2.2 0.13 12.7 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.00032 21.3 0.2 0.00062 20.4 0.1 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.00035 20.7 0.1 0.00073 19.7 0.1 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.00083 19.8 1.5 0.0018 18.7 1.5 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.0015 18.7 0.0 0.0019 18.4 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.01 15.5 1.1 0.072 12.8 0.1 2.1 1 1 1 2 2 2 0 TPR repeat Fis1_TPR_C PF14853.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.056 13.5 0.9 1.5 8.9 0.1 2.1 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat Tox-REase-9 PF15650.6 NODE_69947_length_226_cov_1.675393_g62006_i0reverse_frame_1 - 0.086 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 9 Peptidase_M61 PF05299.12 NODE_69940_length_226_cov_1.727749_g61999_i0reverse_frame_1 - 0.017 15.5 0.0 0.019 15.4 0.0 1.1 1 0 0 1 1 1 0 M61 glycyl aminopeptidase Castor1_N PF18700.1 NODE_69940_length_226_cov_1.727749_g61999_i0reverse_frame_1 - 0.026 14.3 0.6 0.039 13.8 0.6 1.2 1 0 0 1 1 1 0 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Tox-WTIP PF15654.6 NODE_69940_length_226_cov_1.727749_g61999_i0forward_frame_1 - 0.057 13.8 0.4 0.086 13.3 0.4 1.2 1 0 0 1 1 1 0 Toxin with a conserved tryptophan and TIP tripeptide motif S1-P1_nuclease PF02265.16 NODE_69935_length_226_cov_1.785340_g61994_i0reverse_frame_1 - 0.073 12.9 0.1 0.073 12.9 0.1 1.0 1 0 0 1 1 1 0 S1/P1 Nuclease PTS_2-RNA PF01885.16 NODE_69933_length_226_cov_1.790576_g61992_i0reverse_frame_1 - 0.017 15.1 0.0 0.019 15.0 0.0 1.1 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family CheX PF13690.6 NODE_69931_length_226_cov_1.806283_g61990_i0forward_frame_1 - 0.0043 17.2 0.0 0.005 17.0 0.0 1.1 1 0 0 1 1 1 1 Chemotaxis phosphatase CheX Imm5 PF14423.6 NODE_69931_length_226_cov_1.806283_g61990_i0forward_frame_1 - 0.14 12.4 0.4 0.15 12.2 0.4 1.1 1 0 0 1 1 1 0 Immunity protein Imm5 SBDS_C PF09377.10 NODE_69925_length_226_cov_1.884817_g61984_i0forward_frame_1 - 0.01 15.8 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 0 SBDS protein C-terminal domain Rubredoxin_2 PF18073.1 NODE_69924_length_226_cov_1.890052_g61983_i0forward_frame_1 - 0.023 14.4 0.7 0.041 13.6 0.7 1.4 1 0 0 1 1 1 0 Rubredoxin metal binding domain APS-reductase_C PF12139.8 NODE_69923_length_226_cov_1.905759_g61982_i0forward_frame_1 - 0.15 12.2 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Adenosine-5'-phosphosulfate reductase beta subunit BBP2 PF07642.11 NODE_69922_length_226_cov_1.910995_g61981_i0reverse_frame_1 - 0.15 11.2 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative beta-barrel porin-2, OmpL-like. bbp2 WD40 PF00400.32 NODE_69920_length_226_cov_1.947644_g61979_i0reverse_frame_1 - 2.8e-05 24.8 0.0 0.0055 17.5 0.1 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_69920_length_226_cov_1.947644_g61979_i0reverse_frame_1 - 0.018 15.3 0.0 2.9 8.2 0.0 2.0 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 NODE_69920_length_226_cov_1.947644_g61979_i0reverse_frame_1 - 0.031 13.2 0.0 0.031 13.2 0.0 1.2 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Phage_holin_7_1 PF16081.5 NODE_69919_length_226_cov_1.958115_g61978_i0forward_frame_1 - 2.7 8.2 11.7 4.9 7.3 0.7 3.0 1 1 2 3 3 3 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family BK_channel_a PF03493.18 NODE_69916_length_226_cov_2.000000_g61975_i0forward_frame_1 - 0.027 14.6 0.1 0.031 14.5 0.1 1.1 1 0 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit tRNA-synt_2b PF00587.25 NODE_69914_length_226_cov_2.041885_g61973_i0forward_frame_1 - 0.064 13.2 0.0 0.072 13.0 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) IBB PF01749.20 NODE_69912_length_226_cov_2.109948_g61971_i0forward_frame_1 - 0.03 14.8 0.2 0.036 14.5 0.2 1.2 1 0 0 1 1 1 0 Importin beta binding domain Flp_Fap PF04964.14 NODE_69899_length_226_cov_2.319372_g61958_i0reverse_frame_1 - 0.18 11.6 0.2 0.29 11.0 0.2 1.3 1 0 0 1 1 1 0 Flp/Fap pilin component Cyd_oper_YbgE PF09600.10 NODE_69898_length_226_cov_2.366492_g61957_i0reverse_frame_1 - 0.03 14.7 0.2 0.061 13.7 0.1 1.4 1 1 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) CCDC24 PF15669.5 NODE_69894_length_226_cov_2.492147_g61953_i0reverse_frame_1 - 0.1 12.5 2.1 0.11 12.3 2.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family FecCD PF01032.18 NODE_69894_length_226_cov_2.492147_g61953_i0forward_frame_1 - 3.3e-13 49.3 1.0 3.4e-13 49.3 1.0 1.0 1 0 0 1 1 1 1 FecCD transport family DUF3606 PF12244.8 NODE_69893_length_226_cov_2.539267_g61952_i0forward_frame_1 - 0.056 13.4 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3606) TMF_DNA_bd PF12329.8 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 8.6e-05 22.5 13.8 0.01 15.8 4.8 2.0 1 1 1 2 2 2 2 TATA element modulatory factor 1 DNA binding TRAF_BIRC3_bd PF16673.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.00044 20.0 5.0 0.0054 16.5 0.3 2.4 1 1 1 2 2 2 1 TNF receptor-associated factor BIRC3 binding domain DUF4201 PF13870.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.0077 16.0 7.5 0.29 10.8 7.5 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) DUF5082 PF16888.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.0078 16.5 7.9 0.065 13.5 2.3 2.1 1 1 0 2 2 2 1 Domain of unknown function (DUF5082) Fcf2 PF08698.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.021 15.2 0.1 0.024 15.0 0.1 1.2 1 0 0 1 1 1 0 Fcf2 pre-rRNA processing ABC_tran_CTD PF16326.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.022 15.0 9.4 0.1 12.8 4.6 2.5 1 1 1 2 2 2 0 ABC transporter C-terminal domain CEP209_CC5 PF16574.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.028 14.6 6.7 0.08 13.1 6.7 1.7 1 1 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 BLOC1_2 PF10046.9 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.046 14.0 7.1 0.27 11.6 6.8 1.9 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Peptidase_S46 PF10459.9 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.05 12.3 0.5 0.051 12.2 0.5 1.0 1 0 0 1 1 1 0 Peptidase S46 DUF465 PF04325.13 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.057 13.5 0.5 0.057 13.5 0.5 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF465) DUF1192 PF06698.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.059 13.4 1.0 0.059 13.4 1.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1192) Prefoldin PF02996.17 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.084 12.8 6.6 0.077 12.9 2.2 2.0 1 1 1 2 2 2 0 Prefoldin subunit FAM76 PF16046.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.095 12.0 3.4 0.13 11.6 3.4 1.3 1 1 0 1 1 1 0 FAM76 protein DUF641 PF04859.12 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.12 12.7 4.7 0.27 11.5 4.7 1.6 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) FlxA PF14282.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.13 12.3 6.6 0.19 11.7 6.6 1.4 1 1 0 1 1 1 0 FlxA-like protein DivIC PF04977.15 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.15 11.8 7.7 0.14 11.9 2.4 2.1 1 1 1 2 2 2 0 Septum formation initiator Trimer_CC PF08954.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.16 11.6 3.2 2.2 7.9 1.1 2.1 2 0 0 2 2 2 0 Trimerisation motif DUF724 PF05266.14 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.16 11.8 4.0 0.22 11.3 4.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ACCA PF03255.14 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.17 11.7 2.5 0.24 11.3 2.5 1.3 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JIP_LZII PF16471.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.19 11.9 8.0 0.69 10.1 1.9 2.1 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II PKcGMP_CC PF16808.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.2 11.5 6.5 1.3 9.0 2.5 3.1 2 1 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF16 PF01519.16 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.22 12.0 4.4 0.88 10.1 4.4 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 UPF0242 PF06785.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.23 11.6 6.8 0.38 10.8 6.8 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ADIP PF11559.8 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.28 11.3 7.5 4.5 7.3 7.4 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding SlyX PF04102.12 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.29 11.8 5.0 0.43 11.2 2.7 2.2 1 1 1 2 2 2 0 SlyX Prefoldin_2 PF01920.20 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.32 11.0 9.9 0.24 11.4 3.4 2.1 1 1 1 2 2 2 0 Prefoldin subunit DUF4094 PF13334.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.38 11.2 6.5 3.8 8.0 6.5 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) Csm1_N PF18504.1 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.44 10.9 7.1 0.76 10.2 1.9 2.3 1 1 1 2 2 2 0 Csm1 N-terminal domain LapA_dom PF06305.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.62 9.9 6.5 3.1 7.7 0.5 2.5 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain CENP-Q PF13094.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.63 10.2 5.8 1.2 9.4 4.5 1.8 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit FlaC_arch PF05377.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.63 10.5 9.3 0.48 10.9 2.9 2.1 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Fib_alpha PF08702.10 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 1 9.5 5.8 2.7 8.2 5.8 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DP PF08781.10 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 1.2 9.0 7.1 1 9.2 1.1 2.0 1 1 1 2 2 2 0 Transcription factor DP DUF4200 PF13863.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 1.2 9.5 9.9 18 5.8 9.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Spc24 PF08286.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 1.4 9.2 7.3 1 9.6 2.1 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Lamprin PF06403.11 NODE_69889_length_226_cov_2.670157_g61948_i0forward_frame_1 - 0.011 15.7 3.1 0.013 15.4 3.1 1.1 1 0 0 1 1 1 0 Lamprin Albumin_I PF08027.11 NODE_69883_length_226_cov_2.743455_g61942_i0reverse_frame_1 - 0.029 14.0 0.8 0.048 13.3 0.1 1.8 2 0 0 2 2 2 0 Albumin I chain b FeThRed_B PF02943.15 NODE_69883_length_226_cov_2.743455_g61942_i0reverse_frame_1 - 0.098 12.7 0.7 0.15 12.1 0.7 1.5 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain DUF2259 PF10016.9 NODE_69881_length_226_cov_2.764398_g61940_i0forward_frame_1 - 0.0032 17.5 0.0 0.0034 17.3 0.0 1.1 1 0 0 1 1 1 1 Predicted secreted protein (DUF2259) FERM_F1 PF18379.1 NODE_69880_length_226_cov_2.874346_g61939_i0reverse_frame_1 - 0.075 13.1 0.1 0.095 12.7 0.1 1.1 1 0 0 1 1 1 0 FERM F1 ubiquitin-like domain PGM1_C PF18105.1 NODE_69876_length_226_cov_2.963351_g61935_i0forward_frame_1 - 0.13 11.8 0.1 0.18 11.4 0.1 1.3 1 0 0 1 1 1 0 PGM1 C-terminal domain SpecificRecomb PF10136.9 NODE_69874_length_226_cov_3.109948_g61933_i0reverse_frame_1 - 0.059 11.7 0.0 0.06 11.7 0.0 1.0 1 0 0 1 1 1 0 Site-specific recombinase DUF3930 PF13067.6 NODE_69869_length_226_cov_3.827225_g61928_i0reverse_frame_1 - 0.079 13.2 0.9 0.11 12.7 0.5 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3930) Peptidase_M13_N PF05649.13 NODE_69866_length_226_cov_4.486911_g61925_i0forward_frame_1 - 0.19 11.4 0.4 0.22 11.1 0.4 1.1 1 0 0 1 1 1 0 Peptidase family M13 YccF PF03733.13 NODE_69865_length_226_cov_4.523560_g61924_i0forward_frame_1 - 0.42 11.4 5.7 0.58 10.9 5.7 1.2 1 0 0 1 1 1 0 Inner membrane component domain Lamprin PF06403.11 NODE_69858_length_226_cov_21.643979_g61917_i0forward_frame_1 - 0.0045 16.9 0.4 0.0051 16.8 0.4 1.1 1 0 0 1 1 1 1 Lamprin NodA PF02474.15 NODE_69848_length_226_cov_39.617801_g61907_i0reverse_frame_1 - 0.049 13.3 0.0 0.053 13.2 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein A (NodA) Ribosomal_L5e PF17144.4 NODE_69837_length_226_cov_49.722513_g61896_i0forward_frame_1 - 0.1 12.6 0.9 0.12 12.4 0.9 1.1 1 0 0 1 1 1 0 Ribosomal large subunit proteins 60S L5, and 50S L18 Metalloenzyme PF01676.18 NODE_69823_length_226_cov_60.554974_g61882_i0reverse_frame_1 - 0.081 12.3 0.0 0.084 12.2 0.0 1.0 1 0 0 1 1 1 0 Metalloenzyme superfamily Chromo PF00385.24 NODE_69819_length_226_cov_71.089005_g61878_i0reverse_frame_1 - 5e-13 48.7 0.5 6.1e-13 48.5 0.5 1.1 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain DUF2458 PF10454.9 NODE_69814_length_226_cov_81.769634_g61873_i0reverse_frame_1 - 0.0085 15.8 1.1 0.0089 15.7 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2458) DUF3760 PF12586.8 NODE_69813_length_226_cov_81.984293_g61872_i0reverse_frame_1 - 0.15 12.2 0.4 0.65 10.2 0.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3760) Fanconi_A PF03511.14 NODE_69810_length_226_cov_86.926702_g61869_i0forward_frame_1 - 0.041 13.8 3.0 0.07 13.1 3.0 1.4 1 1 0 1 1 1 0 Fanconi anaemia group A protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks317.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks317.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks317.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks317.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF782 PF05614.11 NODE_69797_length_226_cov_204.136126_g61856_i0forward_frame_1 - 0.052 13.9 0.0 0.065 13.6 0.0 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) Rdx PF10262.9 NODE_69796_length_226_cov_211.502618_g61855_i0reverse_frame_1 - 0.0038 17.4 0.0 0.0059 16.8 0.0 1.4 1 1 0 1 1 1 1 Rdx family Zfx_Zfy_act PF04704.13 NODE_69795_length_226_cov_326.497382_g61854_i0forward_frame_1 - 0.18 10.9 0.2 0.19 10.8 0.2 1.0 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region DUF3828 PF12883.7 NODE_69783_length_227_cov_0.833333_g61842_i0forward_frame_1 - 0.15 12.4 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3828) CLAMP PF14769.6 NODE_69780_length_227_cov_0.833333_g61839_i0reverse_frame_1 - 0.021 15.3 0.0 0.022 15.2 0.0 1.1 1 0 0 1 1 1 0 Flagellar C1a complex subunit C1a-32 Y_phosphatase2 PF03162.13 NODE_69778_length_227_cov_0.875000_g61837_i0reverse_frame_1 - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family DUF4959 PF16323.5 NODE_69775_length_227_cov_0.921875_g61834_i0forward_frame_1 - 0.0038 17.5 0.0 0.0049 17.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4959) CD45 PF12567.8 NODE_69768_length_227_cov_0.994792_g61827_i0reverse_frame_1 - 0.055 13.5 0.1 0.08 12.9 0.1 1.2 1 0 0 1 1 1 0 Leukocyte receptor CD45 FPP PF05911.11 NODE_69768_length_227_cov_0.994792_g61827_i0reverse_frame_1 - 0.077 11.2 0.1 0.089 11.0 0.1 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil Op_neuropeptide PF08035.11 NODE_69745_length_227_cov_1.250000_g61804_i0reverse_frame_1 - 0.13 12.1 0.5 0.13 12.1 0.5 1.8 2 0 0 2 2 2 0 Opioids neuropeptide CCER1 PF15482.6 NODE_69744_length_227_cov_1.250000_g61803_i0forward_frame_1 - 2.4 8.0 13.4 2.6 7.9 13.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF5345 PF17280.2 NODE_69742_length_227_cov_1.250000_g61801_i0reverse_frame_1 - 0.046 13.7 0.2 0.067 13.2 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5345) PDEase_I PF00233.19 NODE_69739_length_227_cov_1.296875_g61798_i0reverse_frame_1 - 2.7e-22 79.7 0.6 2.7e-22 79.7 0.6 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Nuc_H_symport PF03825.16 NODE_69739_length_227_cov_1.296875_g61798_i0forward_frame_1 - 0.017 14.2 0.1 0.017 14.1 0.1 1.1 1 0 0 1 1 1 0 Nucleoside H+ symporter LPP20 PF02169.16 NODE_69738_length_227_cov_1.317708_g61797_i0forward_frame_1 - 0.089 13.1 1.8 0.1 13.0 1.8 1.1 1 0 0 1 1 1 0 LPP20 lipoprotein TMEM135_C_rich PF15982.5 NODE_69736_length_227_cov_1.322917_g61795_i0reverse_frame_1 - 0.021 15.4 0.6 0.023 15.3 0.6 1.0 1 0 0 1 1 1 0 N-terminal cysteine-rich region of Transmembrane protein 135 Mad3_BUB1_I PF08311.12 NODE_69730_length_227_cov_1.375000_g61789_i0reverse_frame_1 - 0.027 14.4 0.2 0.033 14.2 0.2 1.1 1 0 0 1 1 1 0 Mad3/BUB1 homology region 1 Homez PF11569.8 NODE_69728_length_227_cov_1.395833_g61787_i0forward_frame_1 - 0.38 10.3 1.4 0.59 9.6 1.4 1.3 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez COX17 PF05051.13 NODE_69726_length_227_cov_1.416667_g61785_i0reverse_frame_1 - 0.088 13.2 0.9 0.16 12.3 0.5 1.6 2 0 0 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) RCC1 PF00415.18 NODE_69725_length_227_cov_1.416667_g61784_i0reverse_frame_1 - 3.4e-10 40.4 0.1 2.4e-07 31.3 0.0 2.0 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_69725_length_227_cov_1.416667_g61784_i0reverse_frame_1 - 4.8e-06 26.2 1.5 7.8e-06 25.6 0.2 1.9 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat DUF4736 PF15883.5 NODE_69721_length_227_cov_1.453125_g61780_i0reverse_frame_1 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) YMF19 PF02326.15 NODE_69721_length_227_cov_1.453125_g61780_i0forward_frame_1 - 0.074 13.8 0.4 0.088 13.6 0.4 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 IglC PF11550.8 NODE_69720_length_227_cov_1.458333_g61779_i0forward_frame_1 - 0.0021 17.5 0.0 0.0024 17.4 0.0 1.0 1 0 0 1 1 1 1 Intracellular growth locus C protein Endopep_inhib PF16800.5 NODE_69719_length_227_cov_1.463542_g61778_i0reverse_frame_1 - 0.00097 19.1 0.1 0.001 19.0 0.1 1.1 1 0 0 1 1 1 1 IseA DL-endopeptidase inhibitor DUF1882 PF08966.11 NODE_69716_length_227_cov_1.510417_g61775_i0forward_frame_1 - 1.7 8.9 6.3 16 5.8 0.0 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF1882) HTH_1 PF00126.27 NODE_69714_length_227_cov_1.541667_g61773_i0reverse_frame_1 - 5e-07 29.6 0.1 1.2e-06 28.3 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF1182 PF06681.13 NODE_69714_length_227_cov_1.541667_g61773_i0forward_frame_1 - 0.029 14.0 0.6 0.029 14.0 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1182) Cyclotide PF03784.13 NODE_69712_length_227_cov_1.552083_g61771_i0reverse_frame_1 - 0.16 12.1 4.9 0.3 11.2 4.9 1.4 1 0 0 1 1 1 0 Cyclotide family Pkinase PF00069.25 NODE_69707_length_227_cov_1.588542_g61766_i0reverse_frame_1 - 3.5e-12 46.2 0.0 3.7e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69707_length_227_cov_1.588542_g61766_i0reverse_frame_1 - 4.8e-05 22.8 0.0 5.3e-05 22.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Lactococcin_972 PF09683.10 NODE_69705_length_227_cov_1.588542_g61764_i0forward_frame_1 - 0.015 15.8 0.0 0.023 15.2 0.0 1.3 1 0 0 1 1 1 0 Bacteriocin (Lactococcin_972) V_ATPase_I PF01496.19 NODE_69703_length_227_cov_1.604167_g61762_i0forward_frame_1 - 2.1e-07 29.3 0.1 2.4e-07 29.1 0.1 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF2701 PF10857.8 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 0.21 11.6 5.7 0.29 11.2 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) DUF4191 PF13829.6 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 0.46 9.8 4.2 0.5 9.7 4.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF2254 PF10011.9 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 0.93 8.2 4.2 1 8.1 4.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF2207 PF09972.9 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 1.3 7.7 5.0 1.4 7.6 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MMPL PF03176.15 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 2.7 6.8 6.0 3 6.7 6.0 1.0 1 0 0 1 1 1 0 MMPL family DUF4229 PF14012.6 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 5.3 7.2 14.6 6.8 6.9 14.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) Ac81 PF05820.11 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 5.9 6.4 7.9 7 6.2 7.9 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 DUF818 PF05677.12 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 8.5 5.2 7.6 10 5.0 7.6 1.2 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) NumbF PF06311.12 NODE_69698_length_227_cov_1.645833_g61757_i0forward_frame_1 - 0.13 12.8 0.1 0.14 12.7 0.1 1.2 1 0 0 1 1 1 0 NUMB domain Collagen PF01391.18 NODE_69697_length_227_cov_1.645833_g61756_i0forward_frame_1 - 0.0033 17.1 4.7 0.12 12.1 1.1 2.1 2 0 0 2 2 2 2 Collagen triple helix repeat (20 copies) cEGF PF12662.7 NODE_69697_length_227_cov_1.645833_g61756_i0forward_frame_1 - 0.034 14.1 0.9 0.11 12.5 0.9 1.9 1 0 0 1 1 1 0 Complement Clr-like EGF-like MARVEL PF01284.23 NODE_69690_length_227_cov_1.708333_g61749_i0reverse_frame_1 - 0.015 15.3 0.3 0.02 14.9 0.3 1.4 1 1 0 1 1 1 0 Membrane-associating domain FAM181 PF15238.6 NODE_69677_length_227_cov_1.807292_g61736_i0forward_frame_1 - 0.62 9.9 5.5 0.7 9.7 5.5 1.1 1 0 0 1 1 1 0 FAM181 phiKZ_IP PF12699.7 NODE_69676_length_227_cov_1.812500_g61735_i0forward_frame_1 - 0.21 10.7 0.0 0.23 10.6 0.0 1.0 1 0 0 1 1 1 0 phiKZ-like phage internal head proteins DUF485 PF04341.12 NODE_69664_length_227_cov_1.901042_g61723_i0forward_frame_1 - 0.024 14.6 0.5 0.033 14.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 Pns11_12 PF17464.2 NODE_69656_length_227_cov_2.046875_g61715_i0reverse_frame_1 - 1.4 8.6 3.3 1.5 8.4 3.3 1.0 1 0 0 1 1 1 0 Non-structural protein 11 and 12 Mdv1 PF11542.8 NODE_69655_length_227_cov_2.057292_g61714_i0reverse_frame_1 - 0.022 14.7 0.3 0.037 14.0 0.3 1.3 1 0 0 1 1 1 0 Mitochondrial division protein 1 WaaY PF06176.11 NODE_69653_length_227_cov_2.062500_g61712_i0reverse_frame_1 - 2.7e-36 125.3 2.4 3e-36 125.2 2.4 1.0 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) Hpr_kinase_C PF07475.12 NODE_69653_length_227_cov_2.062500_g61712_i0reverse_frame_1 - 0.075 12.5 0.0 0.077 12.5 0.0 1.0 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain E3_UFM1_ligase PF09743.9 NODE_69642_length_227_cov_2.182292_g61701_i0reverse_frame_1 - 0.037 13.6 0.3 0.042 13.5 0.3 1.0 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 Phage_tail_L PF05100.12 NODE_69637_length_227_cov_2.244792_g61696_i0reverse_frame_1 - 0.029 13.7 0.0 0.11 11.8 0.0 1.7 1 1 1 2 2 2 0 Phage minor tail protein L SWC7 PF17330.2 NODE_69629_length_227_cov_2.453125_g61688_i0reverse_frame_1 - 0.0087 16.1 1.4 0.39 10.8 0.1 2.1 1 1 1 2 2 2 2 SWR1 chromatin-remodelling complex, sub-unit Swc7 STAG PF08514.11 NODE_69629_length_227_cov_2.453125_g61688_i0forward_frame_1 - 0.21 11.5 1.6 0.22 11.4 0.7 1.4 1 1 0 1 1 1 0 STAG domain Taxilin PF09728.9 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.0075 15.5 8.4 0.0079 15.4 8.4 1.0 1 0 0 1 1 1 1 Myosin-like coiled-coil protein FlaC_arch PF05377.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.0096 16.3 6.7 0.076 13.4 1.8 2.1 1 1 1 2 2 2 2 Flagella accessory protein C (FlaC) Prefoldin_3 PF13758.6 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.017 15.2 4.0 0.021 14.9 3.8 1.3 1 1 0 1 1 1 0 Prefoldin subunit ATG16 PF08614.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.03 14.5 4.8 0.038 14.2 4.8 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) SpoIISA_toxin PF14171.6 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.065 12.9 3.2 0.072 12.8 3.2 1.0 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system HrpB7 PF09486.10 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.076 13.4 1.4 0.19 12.1 1.0 1.6 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) Atg14 PF10186.9 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.089 11.9 6.8 0.1 11.7 6.8 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlgN PF05130.12 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.1 13.1 4.7 0.13 12.8 4.7 1.1 1 0 0 1 1 1 0 FlgN protein Laminin_II PF06009.12 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.14 12.2 6.7 0.15 12.0 6.7 1.0 1 0 0 1 1 1 0 Laminin Domain II KELK PF15796.5 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.18 12.3 9.5 0.71 10.4 9.5 1.9 1 1 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF641 PF04859.12 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.22 11.9 6.2 0.3 11.4 6.2 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF1664 PF07889.12 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.29 11.2 5.6 0.39 10.8 5.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.3 9.9 8.9 0.31 9.9 8.9 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF948 PF06103.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.59 10.4 4.2 0.86 9.9 4.2 1.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Bcr-Abl_Oligo PF09036.10 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.6 10.1 3.8 3.2 7.8 0.3 2.1 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain UPF0242 PF06785.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 1.9 8.6 9.3 2.1 8.4 9.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMPIT PF07851.13 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 2.6 7.2 6.2 3 7.0 6.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein RE_SinI PF09570.10 NODE_69620_length_227_cov_2.656250_g61679_i0reverse_frame_1 - 0.14 11.4 0.1 0.14 11.3 0.1 1.0 1 0 0 1 1 1 0 SinI restriction endonuclease WD40 PF00400.32 NODE_69620_length_227_cov_2.656250_g61679_i0forward_frame_1 - 2.4e-05 25.0 0.0 0.35 11.8 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_69620_length_227_cov_2.656250_g61679_i0forward_frame_1 - 0.00059 20.1 0.0 0.36 11.2 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain KRTAP PF11759.8 NODE_69616_length_227_cov_2.744792_g61675_i0reverse_frame_1 - 0.053 14.1 13.3 0.066 13.8 13.3 1.1 1 0 0 1 1 1 0 Keratin-associated matrix Rh5 PF18515.1 NODE_69606_length_227_cov_3.041667_g61665_i0reverse_frame_1 - 0.12 11.6 0.0 0.15 11.4 0.0 1.0 1 0 0 1 1 1 0 Rh5 coiled-coil domain CKS PF01111.19 NODE_69601_length_227_cov_3.520833_g61660_i0forward_frame_1 - 9.6e-05 22.6 0.3 0.00015 21.9 0.3 1.3 1 0 0 1 1 1 1 Cyclin-dependent kinase regulatory subunit AA_permease_2 PF13520.6 NODE_69600_length_227_cov_3.635417_g61659_i0forward_frame_1 - 2.1e-10 40.0 1.4 2.4e-10 39.9 1.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 NODE_69600_length_227_cov_3.635417_g61659_i0forward_frame_1 - 8.9e-06 24.6 1.0 9e-06 24.5 1.0 1.0 1 0 0 1 1 1 1 Amino acid permease RPGR1_C PF18111.1 NODE_69592_length_227_cov_5.958333_g61651_i0forward_frame_1 - 0.0076 16.2 0.5 0.0086 16.0 0.5 1.1 1 0 0 1 1 1 1 Retinitis pigmentosa G-protein regulator interacting C-terminal SDF PF00375.18 NODE_69586_length_227_cov_26.000000_g61645_i0forward_frame_1 - 0.11 11.4 2.2 0.14 11.2 2.2 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family ABC2_membrane_3 PF12698.7 NODE_69586_length_227_cov_26.000000_g61645_i0forward_frame_1 - 10 5.1 11.1 11 5.0 11.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein CREPT PF16566.5 NODE_69583_length_227_cov_30.791667_g61642_i0forward_frame_1 - 0.0094 16.1 0.2 0.012 15.8 0.2 1.1 1 0 0 1 1 1 1 Cell-cycle alteration and expression-elevated protein in tumour IML1 PF12257.8 NODE_69583_length_227_cov_30.791667_g61642_i0forward_frame_1 - 0.022 13.9 0.3 0.022 13.9 0.3 1.1 1 0 0 1 1 1 0 Vacuolar membrane-associated protein Iml1 DUF1980 PF09323.10 NODE_69582_length_227_cov_30.828125_g61641_i0reverse_frame_1 - 0.5 10.2 2.6 0.58 10.0 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) TMEM138 PF14935.6 NODE_69581_length_227_cov_31.583333_g61640_i0reverse_frame_1 - 0.029 15.0 1.3 0.034 14.8 1.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 138 DUF4462 PF14692.6 NODE_69579_length_227_cov_34.791667_g61638_i0forward_frame_1 - 0.11 12.0 1.8 0.32 10.5 1.8 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) TPT PF03151.16 NODE_69577_length_227_cov_36.390625_g61636_i0forward_frame_1 - 0.089 12.1 0.0 0.099 12.0 0.0 1.0 1 0 0 1 1 1 0 Triose-phosphate Transporter family KIAA1430 PF13879.6 NODE_69575_length_227_cov_38.182292_g61634_i0forward_frame_1 - 0.0017 19.1 4.4 0.0019 18.9 4.4 1.2 1 0 0 1 1 1 1 KIAA1430 homologue FAM194 PF14977.6 NODE_69575_length_227_cov_38.182292_g61634_i0forward_frame_1 - 0.044 13.1 0.8 0.045 13.1 0.8 1.0 1 0 0 1 1 1 0 FAM194 protein MgtC PF02308.16 NODE_69573_length_227_cov_39.104167_g61632_i0reverse_frame_1 - 0.012 16.0 0.0 0.015 15.7 0.0 1.0 1 0 0 1 1 1 0 MgtC family Soyouz_module PF14313.6 NODE_69572_length_227_cov_39.182292_g61631_i0reverse_frame_1 - 0.046 13.5 0.1 0.065 13.0 0.1 1.2 1 0 0 1 1 1 0 N-terminal region of Paramyxovirinae phosphoprotein (P) DUF3649 PF12365.8 NODE_69561_length_227_cov_49.812500_g61620_i0forward_frame_1 - 0.008 15.9 0.1 0.017 14.8 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3649) YuiB PF14068.6 NODE_69557_length_227_cov_52.145833_g61616_i0forward_frame_1 - 0.14 12.8 0.0 0.15 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative membrane protein YpmT PF17431.2 NODE_69551_length_227_cov_56.005208_g61610_i0reverse_frame_1 - 0.053 13.6 0.7 0.094 12.8 0.7 1.4 1 0 0 1 1 1 0 Uncharacterized YmpT-like Cytochrom_c3_2 PF14537.6 NODE_69550_length_227_cov_56.515625_g61609_i0forward_frame_1 - 0.056 13.9 0.1 0.065 13.7 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c3 c-SKI_SMAD_bind PF08782.10 NODE_69546_length_227_cov_59.781250_g61605_i0forward_frame_1 - 0.21 11.8 4.5 0.26 11.5 4.5 1.1 1 0 0 1 1 1 0 c-SKI Smad4 binding domain DUF2883 PF11097.8 NODE_69533_length_227_cov_80.947917_g61592_i0forward_frame_1 - 0.068 13.3 0.0 0.78 9.9 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2883) Lamprin PF06403.11 NODE_69532_length_227_cov_83.468750_g61591_i0forward_frame_1 - 0.24 11.4 10.5 0.4 10.6 10.5 1.4 1 1 0 1 1 1 0 Lamprin TrbE PF11100.8 NODE_69531_length_227_cov_85.104167_g61590_i0reverse_frame_1 - 0.0071 16.6 1.8 0.011 15.9 1.8 1.3 1 0 0 1 1 1 1 Conjugal transfer protein TrbE Ank_2 PF12796.7 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 1.5e-13 51.1 0.0 1.8e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 7.3e-10 39.2 0.0 1.1e-09 38.6 0.0 1.3 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 6.2e-09 35.9 0.0 8.5e-05 22.8 0.0 2.1 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 6.5e-09 35.9 0.0 6.8e-05 23.1 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 3.4e-08 33.1 0.0 0.00011 22.4 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Roc PF08477.13 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 1.4e-07 31.7 0.0 1.9e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 2.1e-06 27.5 0.0 2.8e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Ras family Arf PF00025.21 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 6.3e-05 22.5 0.0 7.4e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.0055 16.2 0.0 0.0065 15.9 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit FtsK_SpoIIIE PF01580.18 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.0098 15.3 0.0 0.0098 15.3 0.0 1.0 1 0 0 1 1 1 1 FtsK/SpoIIIE family TniB PF05621.11 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.019 14.4 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein AAA_7 PF12775.7 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.019 14.5 0.1 0.021 14.3 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region Dynamin_N PF00350.23 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.064 13.3 0.0 0.08 13.0 0.0 1.2 1 0 0 1 1 1 0 Dynamin family DUF4180 PF13788.6 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.11 12.4 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4180) T2SSE PF00437.20 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.12 11.4 0.1 0.13 11.3 0.1 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein RCC1_2 PF13540.6 NODE_69524_length_227_cov_117.703125_g61583_i0forward_frame_1 - 0.00037 20.2 0.6 0.57 10.1 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 NODE_69524_length_227_cov_117.703125_g61583_i0forward_frame_1 - 6.2 6.9 7.9 14 5.7 1.2 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 DndB PF14072.6 NODE_69523_length_227_cov_117.890625_g61582_i0reverse_frame_1 - 0.033 13.4 0.1 0.036 13.3 0.1 1.0 1 0 0 1 1 1 0 DNA-sulfur modification-associated SPO11_like PF03533.14 NODE_69523_length_227_cov_117.890625_g61582_i0reverse_frame_1 - 0.14 12.3 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 SPO11 homologue LRR_9 PF14580.6 NODE_69523_length_227_cov_117.890625_g61582_i0forward_frame_1 - 0.083 12.4 0.3 0.098 12.2 0.3 1.0 1 0 0 1 1 1 0 Leucine-rich repeat VESA1_N PF12785.7 NODE_69514_length_227_cov_202.505208_g61573_i0reverse_frame_1 - 0.07 12.1 4.6 0.073 12.0 4.6 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 GREB1 PF15782.5 NODE_69514_length_227_cov_202.505208_g61573_i0forward_frame_1 - 0.092 9.9 0.5 0.11 9.6 0.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer RseC_MucC PF04246.12 NODE_69513_length_227_cov_209.786458_g61572_i0forward_frame_1 - 0.029 14.3 0.8 0.038 13.9 0.8 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC SR-25 PF10500.9 NODE_69510_length_227_cov_247.729167_g61569_i0forward_frame_1 - 0.13 11.9 12.1 0.14 11.7 12.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein UPF0020 PF01170.18 NODE_69508_length_227_cov_334.807292_g61567_i0forward_frame_1 - 7.7e-10 38.8 0.0 7.8e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 AviRa PF11599.8 NODE_69508_length_227_cov_334.807292_g61567_i0forward_frame_1 - 0.052 13.0 0.0 0.056 12.9 0.0 1.0 1 0 0 1 1 1 0 RRNA methyltransferase AviRa Methyltransf_11 PF08241.12 NODE_69508_length_227_cov_334.807292_g61567_i0forward_frame_1 - 0.096 13.3 0.2 0.17 12.5 0.2 1.6 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_69508_length_227_cov_334.807292_g61567_i0forward_frame_1 - 0.11 12.2 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Methyltransferase domain FNIP PF05725.12 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_1 - 1.4e-22 79.6 11.3 1.4e-11 44.3 1.5 2.0 2 0 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_1 - 4.8e-05 23.3 0.2 5.7e-05 23.1 0.2 1.2 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) Glyco_hydro_65C PF03633.15 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_1 - 0.035 14.0 0.9 31 4.6 0.0 3.6 4 0 0 4 4 4 0 Glycosyl hydrolase family 65, C-terminal domain LRR_11 PF18831.1 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_1 - 2.3 7.9 14.0 9.4 5.9 0.7 3.8 3 1 0 3 3 3 0 Leucine-rich repeat DUF1476 PF07345.11 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_1 - 0.17 12.3 3.1 27 5.2 0.1 3.0 1 1 2 3 3 3 0 ATPase inhibitor subunit zeta Glyco_transf_54 PF04666.13 NODE_69502_length_228_cov_0.823834_g61561_i0reverse_frame_1 - 0.0085 15.0 0.8 0.0092 14.9 0.8 1.0 1 0 0 1 1 1 1 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region Borrelia_orfD PF02999.14 NODE_69502_length_228_cov_0.823834_g61561_i0reverse_frame_1 - 0.07 13.4 0.2 0.1 12.9 0.2 1.3 1 0 0 1 1 1 0 Borrelia orf-D family Spt20 PF12090.8 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 0.082 12.5 16.2 0.087 12.4 16.2 1.0 1 0 0 1 1 1 0 Spt20 family Roughex PF06020.11 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 0.25 10.4 4.8 0.26 10.3 4.8 1.0 1 0 0 1 1 1 0 Drosophila roughex protein DUF2722 PF10846.8 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 0.6 9.0 12.5 0.58 9.0 12.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) TERB2 PF15101.6 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 3.4 7.7 8.3 3.2 7.7 8.3 1.0 1 0 0 1 1 1 0 Telomere-associated protein TERB2 TFIIA PF03153.13 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 4.6 7.1 15.9 4.4 7.2 15.9 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Snf7 PF03357.21 NODE_69497_length_228_cov_0.829016_g61556_i0reverse_frame_1 - 0.39 10.3 4.8 0.49 10.0 4.8 1.2 1 0 0 1 1 1 0 Snf7 TIP39 PF14980.6 NODE_69485_length_228_cov_1.031088_g61544_i0forward_frame_1 - 0.2 11.6 0.1 0.32 10.9 0.1 1.2 1 0 0 1 1 1 0 TIP39 peptide Prenylcys_lyase PF07156.14 NODE_69480_length_228_cov_1.056995_g61539_i0reverse_frame_1 - 0.059 12.5 0.1 0.061 12.4 0.1 1.0 1 0 0 1 1 1 0 Prenylcysteine lyase Pkinase PF00069.25 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 7.7e-23 81.2 0.3 8.2e-23 81.1 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 1.1e-17 64.3 0.1 1.1e-17 64.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.00017 21.6 0.0 0.00017 21.6 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.00092 18.1 0.2 0.00093 18.1 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.0012 18.2 0.0 0.0013 18.1 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.0029 16.6 0.0 0.0033 16.4 0.0 1.0 1 0 0 1 1 1 1 Haspin like kinase domain YrbL-PhoP_reg PF10707.9 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.0069 15.9 0.1 0.0075 15.8 0.1 1.1 1 0 0 1 1 1 1 PhoP regulatory network protein YrbL Choline_kinase PF01633.20 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.0074 15.9 0.1 0.011 15.3 0.2 1.3 1 1 0 1 1 1 1 Choline/ethanolamine kinase RIO1 PF01163.22 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.011 15.3 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 0 RIO1 family FTA2 PF13095.6 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.037 13.6 0.1 0.037 13.6 0.1 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Seadorna_VP7 PF07387.11 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.062 12.3 0.1 0.065 12.3 0.1 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Enterotoxin_HS1 PF08090.11 NODE_69473_length_228_cov_1.186528_g61532_i0reverse_frame_1 - 0.019 14.9 0.4 0.14 12.2 0.2 2.0 2 0 0 2 2 2 0 Heat stable E.coli enterotoxin 1 DCP1 PF06058.13 NODE_69464_length_228_cov_1.227979_g61523_i0reverse_frame_1 - 0.03 14.2 0.4 0.035 14.0 0.4 1.1 1 0 0 1 1 1 0 Dcp1-like decapping family Adeno_PIX PF03955.14 NODE_69459_length_228_cov_1.238342_g61518_i0reverse_frame_1 - 0.46 10.7 10.4 0.55 10.4 10.4 1.2 1 0 0 1 1 1 0 Adenovirus hexon-associated protein (IX) Sporozoite_P67 PF05642.11 NODE_69459_length_228_cov_1.238342_g61518_i0reverse_frame_1 - 0.89 7.6 6.4 1 7.4 6.4 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen SSP160 PF06933.11 NODE_69459_length_228_cov_1.238342_g61518_i0reverse_frame_1 - 2.2 6.4 21.2 2.5 6.2 21.2 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Tic110 PF16940.5 NODE_69459_length_228_cov_1.238342_g61518_i0reverse_frame_1 - 2.7 6.4 4.0 2.8 6.3 4.0 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter TAF4 PF05236.14 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_1 - 0.77 9.4 14.8 0.82 9.4 14.8 1.0 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family DUF1635 PF07795.11 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_1 - 4.3 7.1 16.1 4.5 7.1 16.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) FAM199X PF15814.5 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_1 - 8.7 5.3 18.3 9 5.3 18.3 1.1 1 0 0 1 1 1 0 Protein family FAM199X RSRP PF17069.5 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_1 - 8.9 5.8 23.5 9.2 5.7 23.5 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 zf-TFIIIC PF12660.7 NODE_69457_length_228_cov_1.238342_g61516_i0reverse_frame_1 - 0.084 12.8 0.0 0.094 12.7 0.0 1.2 1 0 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex MORN PF02493.20 NODE_69449_length_228_cov_1.243523_g61508_i0reverse_frame_1 - 2.4e-09 36.5 3.2 2.1e-05 24.1 0.6 2.4 2 0 0 2 2 2 2 MORN repeat SKICH PF17751.1 NODE_69439_length_228_cov_1.310881_g61498_i0forward_frame_1 - 0.04 14.5 0.0 0.046 14.3 0.0 1.2 1 0 0 1 1 1 0 SKICH domain DUF3915 PF13054.6 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 0.00066 19.6 5.5 0.00073 19.5 5.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 0.13 10.6 13.2 0.13 10.5 13.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family Conotoxin PF02950.17 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 0.18 12.8 0.8 0.24 12.5 0.8 1.2 1 0 0 1 1 1 0 Conotoxin Phage_Gp23 PF10669.9 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 0.62 10.4 5.0 0.68 10.3 5.0 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) PRP38_assoc PF12871.7 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 5.6 7.6 20.5 8.5 7.1 20.5 1.3 1 0 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Dehydratase_hem PF13816.6 NODE_69429_length_228_cov_1.373057_g61488_i0reverse_frame_1 - 0.093 12.1 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Haem-containing dehydratase Ribosomal_S28e PF01200.18 NODE_69421_length_228_cov_1.445596_g61480_i0reverse_frame_1 - 0.14 12.2 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S28e Fimbrial PF00419.20 NODE_69420_length_228_cov_1.445596_g61479_i0reverse_frame_1 - 0.04 14.2 0.3 0.042 14.1 0.3 1.1 1 0 0 1 1 1 0 Fimbrial protein oligo_HPY PF08352.12 NODE_69420_length_228_cov_1.445596_g61479_i0forward_frame_1 - 0.17 12.5 1.0 1.2 9.7 1.0 1.9 1 1 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region RPA_interact_C PF14768.6 NODE_69418_length_228_cov_1.450777_g61477_i0reverse_frame_1 - 0.043 14.4 0.0 0.055 14.0 0.0 1.2 1 0 0 1 1 1 0 Replication protein A interacting C-terminal GlyL_C PF12524.8 NODE_69417_length_228_cov_1.455959_g61476_i0reverse_frame_1 - 0.063 13.4 0.4 0.093 12.9 0.4 1.3 1 0 0 1 1 1 0 dsDNA virus glycoprotein L C terminal DUF3431 PF11913.8 NODE_69417_length_228_cov_1.455959_g61476_i0reverse_frame_1 - 0.13 12.1 0.0 0.14 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3431) DUF3987 PF13148.6 NODE_69406_length_228_cov_1.601036_g61465_i0reverse_frame_1 - 0.089 11.8 1.5 0.096 11.7 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Pox_A11 PF05061.13 NODE_69406_length_228_cov_1.601036_g61465_i0reverse_frame_1 - 0.12 11.6 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 Poxvirus A11 Protein PARP PF00644.20 NODE_69402_length_228_cov_1.621762_g61461_i0forward_frame_1 - 0.2 11.2 0.1 0.21 11.2 0.1 1.1 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain DNA_ligase_IV PF11411.8 NODE_69396_length_228_cov_1.647668_g61455_i0reverse_frame_1 - 0.52 10.5 2.3 1 9.5 2.3 1.4 1 0 0 1 1 1 0 DNA ligase IV YccF PF03733.13 NODE_69393_length_228_cov_1.709845_g61452_i0reverse_frame_1 - 2.3e-17 63.4 12.9 2.7e-17 63.2 12.9 1.1 1 0 0 1 1 1 1 Inner membrane component domain DUF5362 PF17319.2 NODE_69393_length_228_cov_1.709845_g61452_i0reverse_frame_1 - 0.0015 18.3 0.4 0.0017 18.2 0.4 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5362) DUF2207 PF09972.9 NODE_69393_length_228_cov_1.709845_g61452_i0reverse_frame_1 - 0.62 8.8 2.5 0.7 8.6 2.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) WSC PF01822.19 NODE_69393_length_228_cov_1.709845_g61452_i0forward_frame_1 - 0.022 14.9 1.6 0.028 14.6 1.6 1.1 1 0 0 1 1 1 0 WSC domain RVT_1 PF00078.27 NODE_69389_length_228_cov_1.782383_g61448_i0forward_frame_1 - 1.3e-08 34.7 0.0 1.4e-08 34.5 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) RCC1 PF00415.18 NODE_69386_length_228_cov_1.839378_g61445_i0forward_frame_1 - 3.7e-14 53.1 0.0 5.3e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_69386_length_228_cov_1.839378_g61445_i0forward_frame_1 - 9e-06 25.4 1.0 0.0033 17.2 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF5465 PF17553.2 NODE_69382_length_228_cov_1.854922_g61441_i0forward_frame_1 - 4.6 8.0 9.6 7.6 7.4 0.4 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5465) TusA PF01206.17 NODE_69378_length_228_cov_1.870466_g61437_i0forward_frame_1 - 0.03 14.2 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 Sulfurtransferase TusA AAA_33 PF13671.6 NODE_69378_length_228_cov_1.870466_g61437_i0forward_frame_1 - 0.14 12.3 0.0 0.15 12.2 0.0 1.0 1 0 0 1 1 1 0 AAA domain Apo-CIII PF05778.12 NODE_69376_length_228_cov_1.911917_g61435_i0forward_frame_1 - 0.17 11.6 0.7 5.6 6.7 0.1 2.1 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) START PF01852.19 NODE_69374_length_228_cov_1.922280_g61433_i0forward_frame_1 - 0.00095 18.6 0.0 0.0012 18.3 0.0 1.1 1 0 0 1 1 1 1 START domain DUF4912 PF16258.5 NODE_69374_length_228_cov_1.922280_g61433_i0forward_frame_1 - 0.16 12.2 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4912) Neisseria_TspB PF05616.13 NODE_69362_length_228_cov_2.051813_g61421_i0reverse_frame_1 - 2.1 6.7 8.1 2.3 6.6 8.1 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Ephrin_rec_like PF07699.13 NODE_69358_length_228_cov_2.077720_g61417_i0forward_frame_1 - 4.5e-11 42.3 25.0 7.5e-06 25.6 7.3 2.8 1 1 0 2 2 2 2 Putative ephrin-receptor like NCD3G PF07562.14 NODE_69358_length_228_cov_2.077720_g61417_i0forward_frame_1 - 3.5e-05 23.7 15.7 0.0006 19.7 2.8 2.9 1 1 1 3 3 3 3 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_69358_length_228_cov_2.077720_g61417_i0forward_frame_1 - 0.013 15.9 15.7 24 5.4 8.6 4.0 1 1 1 2 2 2 0 TNFR/NGFR cysteine-rich region Metallothio_Euk PF12749.7 NODE_69358_length_228_cov_2.077720_g61417_i0forward_frame_1 - 9.3 6.5 23.9 6.3 7.0 9.1 2.1 1 1 1 2 2 2 0 Eukaryotic metallothionein RCSD PF05177.12 NODE_69355_length_228_cov_2.108808_g61414_i0reverse_frame_1 - 0.044 14.7 2.3 1.4 9.9 1.6 2.0 1 1 1 2 2 2 0 RCSD region Peptidase_C33 PF05412.12 NODE_69354_length_228_cov_2.113990_g61413_i0reverse_frame_1 - 0.13 12.3 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Equine arterivirus Nsp2-type cysteine proteinase OAF PF14941.6 NODE_69354_length_228_cov_2.113990_g61413_i0forward_frame_1 - 0.023 14.2 2.8 0.026 14.0 2.8 1.0 1 0 0 1 1 1 0 Transcriptional regulator, Out at first Phage_BR0599 PF09356.10 NODE_69354_length_228_cov_2.113990_g61413_i0forward_frame_1 - 0.048 14.0 1.7 0.1 12.9 1.7 1.5 1 1 0 1 1 1 0 Phage conserved hypothetical protein BR0599 DUF1658 PF07871.11 NODE_69351_length_228_cov_2.160622_g61410_i0reverse_frame_1 - 0.064 13.2 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1658) CssAB PF16831.5 NODE_69339_length_228_cov_2.243523_g61398_i0reverse_frame_1 - 0.051 13.9 0.8 0.057 13.8 0.8 1.1 1 0 0 1 1 1 0 CS6 fimbrial subunits A and B, Coli surface antigen 6 RST PF12174.8 NODE_69337_length_228_cov_2.253886_g61396_i0reverse_frame_1 - 0.084 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 RCD1-SRO-TAF4 (RST) plant domain DUF4911 PF16256.5 NODE_69328_length_228_cov_2.357513_g61387_i0reverse_frame_1 - 0.18 11.8 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4911) BNR_3 PF13859.6 NODE_69326_length_228_cov_2.404145_g61385_i0reverse_frame_1 - 0.1 11.9 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 BNR repeat-like domain ISP1_C PF18161.1 NODE_69321_length_228_cov_2.455959_g61380_i0reverse_frame_1 - 0.014 15.3 1.3 0.017 15.1 1.3 1.0 1 0 0 1 1 1 0 ISP1 C-terminal Headcase PF16002.5 NODE_69310_length_228_cov_2.880829_g61369_i0forward_frame_1 - 0.03 13.8 0.5 0.03 13.8 0.5 1.1 1 0 0 1 1 1 0 Headcase protein DASH_Dad2 PF08654.10 NODE_69307_length_228_cov_2.994819_g61366_i0reverse_frame_1 - 0.0085 16.5 0.5 0.01 16.2 0.5 1.1 1 0 0 1 1 1 1 DASH complex subunit Dad2 zf_C2H2_10 PF18414.1 NODE_69305_length_228_cov_3.051813_g61364_i0reverse_frame_1 - 0.078 12.5 0.3 0.15 11.6 0.3 1.4 1 0 0 1 1 1 0 C2H2 type zinc-finger MCC-bdg_PDZ PF10506.9 NODE_69305_length_228_cov_3.051813_g61364_i0forward_frame_1 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DNA_pol_lambd_f PF10391.9 NODE_69302_length_228_cov_3.108808_g61361_i0reverse_frame_1 - 0.082 12.8 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda DUF4928 PF16280.5 NODE_69299_length_228_cov_3.518135_g61358_i0forward_frame_1 - 0.18 11.0 0.1 0.19 11.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4928) DUF4696 PF15767.5 NODE_69299_length_228_cov_3.518135_g61358_i0forward_frame_1 - 0.25 9.9 0.3 0.28 9.7 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4696) DUF2670 PF10875.8 NODE_69276_length_228_cov_41.989637_g61335_i0reverse_frame_1 - 0.046 13.8 0.0 0.046 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) Hva1_TUDOR PF11160.8 NODE_69275_length_228_cov_43.606218_g61334_i0forward_frame_1 - 0.36 11.0 3.6 1.3 9.2 3.6 1.9 1 1 0 1 1 1 0 Hypervirulence associated proteins TUDOR domain CxC1 PF18802.1 NODE_69258_length_228_cov_56.932642_g61317_i0forward_frame_1 - 0.16 12.1 0.6 0.19 11.9 0.6 1.1 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases ECSCR PF15820.5 NODE_69256_length_228_cov_60.269430_g61315_i0forward_frame_1 - 0.087 12.7 0.2 0.088 12.6 0.2 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator zf-P11 PF03854.14 NODE_69244_length_228_cov_69.932642_g61303_i0reverse_frame_1 - 0.21 11.2 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 P-11 zinc finger GAPT PF11770.8 NODE_69239_length_228_cov_103.113990_g61298_i0reverse_frame_1 - 0.061 13.2 0.1 0.07 13.0 0.1 1.1 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) RCR PF12273.8 NODE_69235_length_228_cov_122.227979_g61294_i0forward_frame_1 - 0.032 14.9 0.0 0.038 14.6 0.0 1.0 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red Microvir_J PF04726.13 NODE_69235_length_228_cov_122.227979_g61294_i0forward_frame_1 - 0.04 13.9 0.3 0.058 13.4 0.3 1.2 1 0 0 1 1 1 0 Microvirus J protein Phage_DsbA PF11126.8 NODE_69231_length_228_cov_139.523316_g61290_i0reverse_frame_1 - 0.013 15.7 0.2 0.017 15.3 0.2 1.2 1 0 0 1 1 1 0 Transcriptional regulator DsbA DUF2016 PF09436.10 NODE_69230_length_228_cov_165.025907_g61289_i0forward_frame_1 - 0.029 14.2 0.0 0.043 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) Elf1 PF05129.13 NODE_69227_length_228_cov_208.512953_g61286_i0reverse_frame_1 - 0.67 10.0 0.1 0.67 10.0 0.1 2.1 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like SecE PF00584.20 NODE_69224_length_228_cov_253.259067_g61283_i0forward_frame_1 - 0.059 13.3 0.2 0.16 11.9 0.1 1.7 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex FNIP PF05725.12 NODE_69217_length_228_cov_907.683938_g61276_i0reverse_frame_1 - 4.1e-22 78.1 10.7 1.2e-11 44.6 1.9 2.0 1 1 1 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_69217_length_228_cov_907.683938_g61276_i0reverse_frame_1 - 0.024 14.6 0.1 0.03 14.3 0.1 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) KH_4 PF13083.6 NODE_69217_length_228_cov_907.683938_g61276_i0forward_frame_1 - 0.019 14.8 1.3 4.8 7.1 0.1 2.1 2 0 0 2 2 2 0 KH domain Matrilin_ccoil PF10393.9 NODE_69217_length_228_cov_907.683938_g61276_i0forward_frame_1 - 0.22 11.4 1.1 16 5.4 0.1 2.1 1 1 1 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin HEAT PF02985.22 NODE_69215_length_229_cov_0.819588_g61274_i0forward_frame_3 - 0.048 13.9 0.0 0.15 12.4 0.0 1.8 1 0 0 1 1 1 0 HEAT repeat DUF5583 PF17821.1 NODE_69215_length_229_cov_0.819588_g61274_i0forward_frame_2 - 0.053 13.5 0.2 0.091 12.7 0.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5583) ABC_tran PF00005.27 NODE_69214_length_229_cov_0.824742_g61273_i0reverse_frame_2 - 1.2e-07 32.3 0.0 1.2e-07 32.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter DUF2791 PF10923.8 NODE_69212_length_229_cov_0.824742_g61271_i0forward_frame_2 - 0.052 12.4 0.0 0.053 12.4 0.0 1.0 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) Phage_holin_3_5 PF16085.5 NODE_69211_length_229_cov_0.824742_g61270_i0forward_frame_2 - 0.04 14.1 1.9 0.044 13.9 1.9 1.1 1 0 0 1 1 1 0 Bacteriophage holin Hol, superfamily III DUF3135 PF11333.8 NODE_69210_length_229_cov_0.824742_g61269_i0reverse_frame_2 - 0.15 12.3 0.9 0.19 12.0 0.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3135) Lamprin PF06403.11 NODE_69209_length_229_cov_0.840206_g61268_i0forward_frame_3 - 7.9 6.4 7.9 2.4 8.1 5.0 1.6 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_69209_length_229_cov_0.840206_g61268_i0forward_frame_2 - 0.0022 18.0 2.1 0.0023 17.9 2.1 1.1 1 0 0 1 1 1 1 Lamprin RVT_3 PF13456.6 NODE_69208_length_229_cov_0.865979_g61267_i0reverse_frame_3 - 0.12 12.2 0.1 2.7 7.8 0.0 2.0 1 1 1 2 2 2 0 Reverse transcriptase-like Glyphos_transf PF04464.14 NODE_69206_length_229_cov_0.917526_g61265_i0reverse_frame_3 - 0.0098 14.9 0.0 0.011 14.7 0.0 1.0 1 0 0 1 1 1 1 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase Rsm1 PF08600.10 NODE_69206_length_229_cov_0.917526_g61265_i0reverse_frame_2 - 0.19 11.9 0.6 0.34 11.1 0.6 1.5 1 1 0 1 1 1 0 Rsm1-like LRR_6 PF13516.6 NODE_69202_length_229_cov_0.927835_g61261_i0forward_frame_3 - 0.089 12.9 0.4 0.17 12.0 0.4 1.5 1 0 0 1 1 1 0 Leucine Rich repeat PIN_6 PF17146.4 NODE_69202_length_229_cov_0.927835_g61261_i0forward_frame_2 - 1.2e-06 28.9 0.0 2e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 PIN domain of ribonuclease DbpA PF03880.15 NODE_69201_length_229_cov_0.943299_g61260_i0reverse_frame_3 - 0.049 13.6 0.1 0.068 13.2 0.1 1.3 1 1 0 1 1 1 0 DbpA RNA binding domain DUF1435 PF07256.12 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_2 - 0.015 15.4 0.2 0.022 14.8 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1435) Ponericin PF07442.11 NODE_69195_length_229_cov_1.025773_g61254_i0reverse_frame_2 - 0.17 11.9 0.5 0.28 11.2 0.5 1.3 1 0 0 1 1 1 0 Ponericin TT_ORF1 PF02956.14 NODE_69195_length_229_cov_1.025773_g61254_i0reverse_frame_2 - 8.3 5.0 16.3 8.8 4.9 16.3 1.0 1 0 0 1 1 1 0 TT viral orf 1 DUF5359 PF17313.2 NODE_69194_length_229_cov_1.030928_g61253_i0forward_frame_2 - 0.55 10.3 9.0 1.4 9.0 1.2 2.6 2 1 0 2 2 2 0 Family of unknown function (DUF5359) GIIM PF08388.11 NODE_69192_length_229_cov_1.072165_g61251_i0reverse_frame_2 - 0.069 13.2 0.0 0.088 12.9 0.0 1.2 1 0 0 1 1 1 0 Group II intron, maturase-specific domain DUF2976 PF11190.8 NODE_69188_length_229_cov_1.149485_g61247_i0forward_frame_2 - 0.1 12.4 0.4 0.14 12.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) HEAT PF02985.22 NODE_69186_length_229_cov_1.180412_g61245_i0forward_frame_2 - 0.06 13.6 0.5 0.17 12.2 0.0 2.1 3 0 0 3 3 3 0 HEAT repeat MAT1 PF06391.13 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.0065 16.3 4.4 0.0073 16.2 4.4 1.0 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 MIF4G_like_2 PF09090.11 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.091 12.2 4.7 0.11 11.9 4.7 1.0 1 0 0 1 1 1 0 MIF4G like APG6_N PF17675.1 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.096 13.2 8.9 0.12 12.9 8.9 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region YabA PF06156.13 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.098 13.3 2.4 0.12 13.0 2.4 1.0 1 0 0 1 1 1 0 Initiation control protein YabA Fib_alpha PF08702.10 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.12 12.5 1.1 0.36 11.0 1.1 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Lipoprotein_20 PF13942.6 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.12 12.3 4.9 0.2 11.6 4.9 1.4 1 1 0 1 1 1 0 YfhG lipoprotein Spc24 PF08286.11 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.18 12.1 5.9 0.91 9.8 1.8 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 TBCA PF02970.16 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.18 12.1 6.6 1.3 9.4 1.7 2.1 1 1 0 2 2 2 0 Tubulin binding cofactor A GTP-bdg_M PF16360.5 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.29 11.8 7.5 4 8.1 0.6 2.2 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region cwf21 PF08312.12 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.43 10.8 4.7 2.2 8.5 4.8 2.2 1 1 0 1 1 1 0 cwf21 domain Sugarporin_N PF11471.8 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.67 10.0 13.5 3.1 7.8 0.4 2.2 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension KfrA_N PF11740.8 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 2.3 8.9 13.4 5.9 7.6 13.4 1.6 1 1 0 1 1 1 0 Plasmid replication region DNA-binding N-term AA_permease_C PF13906.6 NODE_69175_length_229_cov_1.231959_g61234_i0reverse_frame_2 - 0.4 10.8 3.1 0.39 10.8 1.8 1.7 1 1 0 1 1 1 0 C-terminus of AA_permease Ion_trans PF00520.31 NODE_69175_length_229_cov_1.231959_g61234_i0forward_frame_2 - 8.5e-07 28.4 0.7 8.6e-07 28.4 0.7 1.0 1 0 0 1 1 1 1 Ion transport protein Tmemb_161AB PF10268.9 NODE_69175_length_229_cov_1.231959_g61234_i0forward_frame_2 - 0.072 11.7 0.3 0.079 11.6 0.3 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB RIC3 PF15361.6 NODE_69174_length_229_cov_1.237113_g61233_i0forward_frame_2 - 0.059 13.8 0.1 0.059 13.8 0.1 1.2 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 AAA_21 PF13304.6 NODE_69173_length_229_cov_1.237113_g61232_i0forward_frame_3 - 0.072 12.9 0.3 0.077 12.8 0.3 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks318.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks318.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks318.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks318.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aa_trans PF01490.18 NODE_69171_length_229_cov_1.237113_g61230_i0forward_frame_3 - 0.00011 21.1 0.9 0.00011 21.1 0.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein ECH_2 PF16113.5 NODE_69168_length_229_cov_1.237113_g61227_i0reverse_frame_3 - 1.5e-15 57.6 0.0 1.5e-15 57.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 NODE_69168_length_229_cov_1.237113_g61227_i0reverse_frame_3 - 0.00063 19.1 0.0 0.00065 19.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Trp_leader1 PF08055.11 NODE_69167_length_229_cov_1.237113_g61226_i0reverse_frame_3 - 2 8.2 5.7 0.21 11.4 1.3 1.6 2 0 0 2 2 2 0 Tryptophan leader peptide T4BSS_DotH_IcmK PF12293.8 NODE_69163_length_229_cov_1.252577_g61222_i0reverse_frame_3 - 0.17 11.1 0.0 0.18 11.0 0.0 1.1 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion GPR15L PF15854.5 NODE_69161_length_229_cov_1.273196_g61220_i0reverse_frame_3 - 0.053 13.7 2.3 0.069 13.4 2.3 1.4 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 DUF4520 PF15016.6 NODE_69161_length_229_cov_1.273196_g61220_i0reverse_frame_3 - 0.087 12.9 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4520) TPR_1 PF00515.28 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 0.00011 21.9 0.6 0.00027 20.6 0.5 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 0.0037 17.2 0.2 0.0064 16.5 0.2 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat MIT PF04212.18 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 0.017 15.2 0.3 0.023 14.8 0.3 1.2 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain TPR_8 PF13181.6 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 0.019 15.2 0.4 0.028 14.6 0.4 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 0.05 13.9 0.0 0.064 13.6 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat DnaB PF00772.21 NODE_69155_length_229_cov_1.309278_g61214_i0reverse_frame_3 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 DnaB-like helicase N terminal domain C2 PF00168.30 NODE_69149_length_229_cov_1.371134_g61208_i0forward_frame_3 - 1.3e-10 41.5 0.1 1.6e-10 41.2 0.1 1.1 1 0 0 1 1 1 1 C2 domain REV PF00424.18 NODE_69146_length_229_cov_1.376289_g61205_i0reverse_frame_3 - 0.015 15.3 1.5 0.019 15.0 1.5 1.2 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) Transformer PF06495.11 NODE_69146_length_229_cov_1.376289_g61205_i0forward_frame_2 - 0.15 12.1 5.7 0.18 11.9 5.7 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein LPD24 PF18839.1 NODE_69138_length_229_cov_1.412371_g61197_i0reverse_frame_3 - 0.056 13.7 0.5 0.073 13.3 0.5 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 24 DUF1419 PF07215.11 NODE_69134_length_229_cov_1.474227_g61193_i0reverse_frame_2 - 0.12 12.5 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1419) MatP PF06303.12 NODE_69134_length_229_cov_1.474227_g61193_i0forward_frame_2 - 0.053 14.1 1.2 0.06 13.9 1.2 1.1 1 0 0 1 1 1 0 MatP N-terminal domain ThrE PF06738.12 NODE_69134_length_229_cov_1.474227_g61193_i0forward_frame_2 - 0.14 11.5 0.9 0.15 11.4 0.9 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter FHA PF00498.26 NODE_69131_length_229_cov_1.479381_g61190_i0reverse_frame_3 - 0.00016 21.9 0.1 0.00021 21.6 0.1 1.3 1 1 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_69131_length_229_cov_1.479381_g61190_i0reverse_frame_3 - 0.068 13.5 0.0 0.071 13.4 0.0 1.2 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain Abhydro_lipase PF04083.16 NODE_69130_length_229_cov_1.494845_g61189_i0forward_frame_3 - 3.8e-13 48.8 0.1 5.5e-13 48.3 0.1 1.2 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region DUF1347 PF07079.11 NODE_69120_length_229_cov_1.608247_g61179_i0reverse_frame_3 - 0.0078 14.8 0.1 0.0078 14.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1347) p450 PF00067.22 NODE_69120_length_229_cov_1.608247_g61179_i0reverse_frame_2 - 0.005 15.6 0.0 0.0058 15.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 TRAM_LAG1_CLN8 PF03798.16 NODE_69118_length_229_cov_1.613402_g61177_i0forward_frame_2 - 2.4e-08 33.9 7.7 2.6e-08 33.9 7.7 1.0 1 0 0 1 1 1 1 TLC domain DEAD_2 PF06733.15 NODE_69115_length_229_cov_1.628866_g61174_i0forward_frame_2 - 0.023 14.3 0.2 0.026 14.1 0.2 1.0 1 0 0 1 1 1 0 DEAD_2 Cyclin_N PF00134.23 NODE_69113_length_229_cov_1.634021_g61172_i0reverse_frame_2 - 1.8e-14 53.6 0.1 2.1e-14 53.3 0.1 1.0 1 0 0 1 1 1 1 Cyclin, N-terminal domain cNMP_binding PF00027.29 NODE_69111_length_229_cov_1.634021_g61170_i0forward_frame_3 - 1.5e-05 25.0 0.0 1.5e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain NosD PF05048.13 NODE_69109_length_229_cov_1.639175_g61168_i0reverse_frame_3 - 1.8e-09 37.2 6.2 1.9e-09 37.1 6.2 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 NODE_69109_length_229_cov_1.639175_g61168_i0reverse_frame_3 - 4.7e-08 33.0 7.1 5.2e-08 32.9 7.1 1.1 1 0 0 1 1 1 1 Right handed beta helix region DUF1565 PF07602.11 NODE_69109_length_229_cov_1.639175_g61168_i0reverse_frame_3 - 0.0028 17.0 2.1 0.004 16.5 2.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1565) 2TM PF13239.6 NODE_69101_length_229_cov_1.649485_g61160_i0reverse_frame_3 - 0.02 15.2 0.3 0.024 15.0 0.3 1.2 1 1 0 1 1 1 0 2TM domain RNase_H PF00075.24 NODE_69098_length_229_cov_1.659794_g61157_i0reverse_frame_2 - 1e-06 29.0 0.1 1.3e-06 28.7 0.1 1.1 1 0 0 1 1 1 1 RNase H MarC PF01914.17 NODE_69094_length_229_cov_1.716495_g61153_i0reverse_frame_3 - 0.049 13.0 0.9 0.058 12.8 0.9 1.1 1 0 0 1 1 1 0 MarC family integral membrane protein NIL PF09383.10 NODE_69094_length_229_cov_1.716495_g61153_i0reverse_frame_2 - 8.3e-15 54.4 0.1 9e-15 54.3 0.1 1.0 1 0 0 1 1 1 1 NIL domain PEPcase PF00311.17 NODE_69092_length_229_cov_1.747423_g61151_i0reverse_frame_3 - 0.0054 14.9 0.2 0.0054 14.9 0.2 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase RNase_P_p30 PF01876.16 NODE_69092_length_229_cov_1.747423_g61151_i0reverse_frame_3 - 0.042 13.3 0.0 0.046 13.2 0.0 1.0 1 0 0 1 1 1 0 RNase P subunit p30 Vitellogenin_N PF01347.22 NODE_69082_length_229_cov_1.804124_g61141_i0reverse_frame_2 - 0.019 13.4 0.0 0.022 13.2 0.0 1.0 1 0 0 1 1 1 0 Lipoprotein amino terminal region Ribosomal_L20 PF00453.18 NODE_69066_length_229_cov_1.912371_g61125_i0forward_frame_3 - 5.4e-07 29.7 0.1 1e-06 28.7 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L20 Suv3_N PF18114.1 NODE_69064_length_229_cov_1.917526_g61123_i0reverse_frame_3 - 0.23 11.6 2.6 0.26 11.4 2.6 1.0 1 0 0 1 1 1 0 Suv3 helical N-terminal domain MutS_I PF01624.20 NODE_69064_length_229_cov_1.917526_g61123_i0forward_frame_3 - 0.0097 16.1 3.4 0.026 14.8 3.4 1.6 1 1 0 1 1 1 1 MutS domain I Pkinase_fungal PF17667.1 NODE_69061_length_229_cov_1.943299_g61120_i0forward_frame_2 - 0.043 12.6 0.0 0.054 12.3 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase zf-C3HC4_4 PF15227.6 NODE_69059_length_229_cov_2.005155_g61118_i0forward_frame_3 - 0.18 12.0 0.2 0.18 12.0 0.2 1.8 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING RPW8 PF05659.11 NODE_69058_length_229_cov_2.005155_g61117_i0reverse_frame_2 - 0.035 13.8 0.4 0.038 13.7 0.4 1.0 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF4522 PF15022.6 NODE_69058_length_229_cov_2.005155_g61117_i0forward_frame_3 - 0.21 11.8 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) Fusion_F0 PF13044.6 NODE_69057_length_229_cov_2.015464_g61116_i0forward_frame_3 - 0.023 13.4 0.1 0.023 13.4 0.1 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0, Isavirus DUF4798 PF16055.5 NODE_69055_length_229_cov_2.030928_g61114_i0forward_frame_2 - 0.14 12.4 4.2 0.16 12.2 4.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4798) SpoVAD PF07451.11 NODE_69047_length_229_cov_2.097938_g61106_i0forward_frame_3 - 0.088 11.5 0.4 0.11 11.2 0.4 1.1 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) Aa_trans PF01490.18 NODE_69045_length_229_cov_2.164948_g61104_i0forward_frame_2 - 0.0041 15.9 0.3 0.0041 15.9 0.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Herpes_UL24 PF01646.16 NODE_69043_length_229_cov_2.195876_g61102_i0reverse_frame_2 - 0.065 13.2 0.1 0.077 12.9 0.1 1.0 1 0 0 1 1 1 0 Herpes virus proteins UL24 and UL76 Mfp-3 PF04202.13 NODE_69041_length_229_cov_2.201031_g61100_i0forward_frame_2 - 2.9 8.3 6.3 4.1 7.9 6.3 1.3 1 0 0 1 1 1 0 Foot protein 3 TMEM82 PF15816.5 NODE_69039_length_229_cov_2.231959_g61098_i0forward_frame_3 - 0.0033 16.4 6.7 0.0039 16.2 6.7 1.0 1 0 0 1 1 1 1 Transmembrane protein 82 Phage_holin_3_1 PF05106.12 NODE_69038_length_229_cov_2.237113_g61097_i0forward_frame_2 - 0.056 13.9 0.3 0.068 13.6 0.3 1.1 1 0 0 1 1 1 0 Phage holin family (Lysis protein S) Herpes_UL4 PF03277.13 NODE_69038_length_229_cov_2.237113_g61097_i0forward_frame_2 - 0.14 11.8 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL4 family DUF3270 PF11674.8 NODE_69037_length_229_cov_2.237113_g61096_i0reverse_frame_3 - 0.75 10.0 2.8 0.97 9.7 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF1514 PF07438.11 NODE_69037_length_229_cov_2.237113_g61096_i0reverse_frame_3 - 1.5 8.8 9.7 2.2 8.2 2.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1514) DUF2701 PF10857.8 NODE_69037_length_229_cov_2.237113_g61096_i0reverse_frame_3 - 3.5 7.7 7.3 7.5 6.7 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2701) DUF1514 PF07438.11 NODE_69037_length_229_cov_2.237113_g61096_i0reverse_frame_2 - 1.1 9.1 5.6 9.6 6.2 5.6 2.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1514) Bunya_NS-S PF01104.17 NODE_69033_length_229_cov_2.345361_g61092_i0reverse_frame_3 - 0.021 14.6 0.2 0.034 13.9 0.2 1.3 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s Ints3 PF10189.9 NODE_69033_length_229_cov_2.345361_g61092_i0reverse_frame_2 - 3.9e-13 49.2 0.1 4e-13 49.2 0.1 1.0 1 0 0 1 1 1 1 Integrator complex subunit 3 Spem1 PF15670.5 NODE_69029_length_229_cov_2.463918_g61088_i0forward_frame_2 - 2.4 7.7 5.2 4.8 6.7 5.2 1.5 1 1 0 1 1 1 0 Spermatid maturation protein 1 CitT PF12431.8 NODE_69028_length_229_cov_2.484536_g61087_i0reverse_frame_3 - 7.3 7.1 5.8 3.7 8.0 0.2 2.5 2 1 1 3 3 3 0 Transcriptional regulator cNMP_binding PF00027.29 NODE_69023_length_229_cov_2.695876_g61082_i0reverse_frame_2 - 0.0021 18.1 0.0 0.0033 17.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF2949 PF11165.8 NODE_69017_length_229_cov_3.237113_g61076_i0reverse_frame_2 - 0.16 12.3 1.0 0.33 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2949) SSP160 PF06933.11 NODE_69016_length_229_cov_3.283505_g61075_i0reverse_frame_3 - 0.26 9.5 12.0 0.27 9.4 12.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF515 PF04415.12 NODE_69016_length_229_cov_3.283505_g61075_i0reverse_frame_3 - 9 4.6 12.0 9.6 4.5 12.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) FSA_C PF10479.9 NODE_69016_length_229_cov_3.283505_g61075_i0forward_frame_3 - 8.7 4.3 9.9 9.1 4.3 9.9 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF202 PF02656.15 NODE_69015_length_229_cov_3.329897_g61074_i0reverse_frame_3 - 0.62 10.5 4.5 0.92 10.0 4.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF202) Bac_transf PF02397.16 NODE_69013_length_229_cov_3.505155_g61072_i0reverse_frame_2 - 8e-18 64.7 0.0 8.1e-18 64.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial sugar transferase zf-C2HC5 PF06221.13 NODE_69012_length_229_cov_3.510309_g61071_i0forward_frame_2 - 0.074 13.1 0.3 0.11 12.5 0.3 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type RIF5_SNase_1 PF18187.1 NODE_69011_length_229_cov_3.530928_g61070_i0reverse_frame_3 - 0.16 11.7 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 TbRIF5 SNase domain 1 Aminotran_1_2 PF00155.21 NODE_69010_length_229_cov_3.556701_g61069_i0forward_frame_2 - 0.00035 19.9 0.0 0.00037 19.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Flg_bb_rod PF00460.20 NODE_69006_length_229_cov_4.180412_g61065_i0reverse_frame_3 - 3.6 7.6 4.9 16 5.6 0.3 2.3 2 0 0 2 2 2 0 Flagella basal body rod protein DUF2417 PF10329.9 NODE_68998_length_229_cov_31.932990_g61057_i0reverse_frame_3 - 0.13 11.6 2.7 0.15 11.5 2.7 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) NMT_C PF02799.15 NODE_68996_length_229_cov_36.288660_g61055_i0reverse_frame_3 - 0.017 14.7 0.2 0.017 14.6 0.2 1.1 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain SelP_N PF04592.14 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 0.29 10.5 30.3 0.29 10.5 30.3 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region DUF3306 PF11748.8 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 0.48 11.3 13.8 0.56 11.1 13.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3306) RR_TM4-6 PF06459.12 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 3.1 7.5 12.9 3.2 7.5 12.9 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 OATP PF03137.20 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 4.5 5.4 11.3 5.3 5.2 11.3 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Pex14_N PF04695.13 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 5.4 7.7 20.0 5.7 7.6 20.0 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Presenilin PF01080.17 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 6.4 5.4 17.5 6.7 5.4 17.5 1.0 1 0 0 1 1 1 0 Presenilin BORG_CEP PF14957.6 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 7.8 7.7 11.8 8.6 7.5 11.8 1.1 1 0 0 1 1 1 0 Cdc42 effector DUF4638 PF15472.6 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 9.2 5.9 14.4 9.5 5.9 14.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4638) PRIMA1 PF16101.5 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 0.0013 18.7 2.8 0.0015 18.6 2.8 1.1 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 0.011 15.3 4.6 0.012 15.2 4.6 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 0.096 12.8 3.2 0.094 12.8 3.2 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator Mucin PF01456.17 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 0.54 10.3 30.5 0.59 10.1 30.5 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF844 PF05815.11 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 1.1 8.4 3.9 1.2 8.3 3.9 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF844) MGC-24 PF05283.11 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 1.3 9.5 14.3 1.3 9.4 14.3 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF1118 PF06549.12 NODE_68992_length_229_cov_36.958763_g61051_i0forward_frame_2 - 0.21 11.9 6.4 0.27 11.6 6.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1118) Med26 PF08711.11 NODE_68976_length_229_cov_50.505155_g61035_i0reverse_frame_3 - 0.00047 20.1 0.3 0.00075 19.5 0.3 1.3 1 0 0 1 1 1 1 TFIIS helical bundle-like domain DUF4454 PF14628.6 NODE_68968_length_229_cov_59.427835_g61027_i0forward_frame_2 - 0.021 14.7 0.0 0.022 14.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4454) bacHORMA_2 PF18173.1 NODE_68968_length_229_cov_59.427835_g61027_i0forward_frame_2 - 0.087 12.7 0.0 0.098 12.5 0.0 1.1 1 0 0 1 1 1 0 Bacterial HORMA domain 2 MCR_D PF02505.14 NODE_68967_length_229_cov_59.943299_g61026_i0reverse_frame_3 - 0.0084 16.0 0.2 0.0088 15.9 0.2 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D DinI PF06183.13 NODE_68967_length_229_cov_59.943299_g61026_i0reverse_frame_2 - 0.033 14.5 0.1 0.047 14.0 0.1 1.4 1 1 0 1 1 1 0 DinI-like family MGS PF02142.22 NODE_68965_length_229_cov_62.221649_g61024_i0forward_frame_2 - 0.083 13.1 0.0 0.098 12.9 0.0 1.0 1 0 0 1 1 1 0 MGS-like domain DUF4821 PF16092.5 NODE_68963_length_229_cov_63.582474_g61022_i0forward_frame_2 - 0.12 11.9 0.1 0.13 11.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4821) Big_3 PF07523.12 NODE_68959_length_229_cov_77.329897_g61018_i0forward_frame_3 - 0.17 12.2 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) Pep1_7 PF17232.2 NODE_68956_length_229_cov_82.319588_g61015_i0forward_frame_2 - 0.061 13.8 0.4 0.083 13.4 0.4 1.2 1 0 0 1 1 1 0 Elicitor peptide 1-7 EspF PF04806.12 NODE_68953_length_229_cov_92.778351_g61012_i0reverse_frame_3 - 0.022 15.2 3.8 0.029 14.8 3.8 1.2 1 0 0 1 1 1 0 EspF protein repeat RNA_bind PF08675.11 NODE_68950_length_229_cov_94.989691_g61009_i0reverse_frame_2 - 0.074 13.1 0.1 0.092 12.8 0.1 1.2 1 0 0 1 1 1 0 RNA binding domain TGT PF01702.18 NODE_68950_length_229_cov_94.989691_g61009_i0forward_frame_2 - 8.9e-15 54.7 1.5 1.1e-14 54.4 1.5 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase Yos1 PF08571.10 NODE_68946_length_229_cov_131.427835_g61005_i0reverse_frame_3 - 0.011 16.0 0.0 0.012 15.9 0.0 1.1 1 0 0 1 1 1 0 Yos1-like DUF2647 PF10839.8 NODE_68946_length_229_cov_131.427835_g61005_i0reverse_frame_3 - 0.039 14.0 0.5 0.072 13.2 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2647) SWIM PF04434.17 NODE_68944_length_229_cov_132.376289_g61003_i0reverse_frame_2 - 2.8e-08 33.3 0.1 4.6e-08 32.6 0.1 1.4 1 0 0 1 1 1 1 SWIM zinc finger AOX PF01786.17 NODE_68943_length_229_cov_139.396907_g61002_i0forward_frame_3 - 0.68 9.5 1.9 0.82 9.2 1.9 1.1 1 0 0 1 1 1 0 Alternative oxidase zf-C3HC4_3 PF13920.6 NODE_68941_length_229_cov_146.206186_g61000_i0reverse_frame_2 - 0.028 14.3 0.2 0.039 13.8 0.2 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Tweety PF04906.13 NODE_68935_length_229_cov_207.123711_g60994_i0forward_frame_3 - 0.023 13.3 0.5 0.028 13.1 0.5 1.1 1 0 0 1 1 1 0 Tweety DHODB_Fe-S_bind PF10418.9 NODE_68930_length_229_cov_267.113402_g60989_i0reverse_frame_3 - 0.0047 16.7 2.9 0.0047 16.7 2.9 1.6 2 0 0 2 2 2 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B YMF19 PF02326.15 NODE_68926_length_229_cov_374.005155_g60985_i0reverse_frame_3 - 0.0014 19.3 0.4 0.0017 19.1 0.4 1.1 1 0 0 1 1 1 1 Plant ATP synthase F0 ETRAMP PF09716.10 NODE_68926_length_229_cov_374.005155_g60985_i0forward_frame_2 - 0.0082 16.2 0.2 0.0092 16.0 0.2 1.1 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Zfx_Zfy_act PF04704.13 NODE_68925_length_229_cov_436.376289_g60984_i0reverse_frame_2 - 0.014 14.6 0.8 0.014 14.5 0.8 1.1 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region Phage_min_tail PF05939.13 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_3 - 0.0006 20.2 2.7 0.3 11.5 0.2 2.1 1 1 1 2 2 2 2 Phage minor tail protein DUF5126 PF17166.4 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_3 - 0.023 14.6 0.1 4.4 7.2 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5126) Ac76 PF05814.11 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_3 - 0.29 11.2 3.4 5.8 7.0 0.2 2.0 2 0 0 2 2 2 0 Orf76 (Ac76) Gram_pos_anchor PF00746.21 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_2 - 0.32 11.0 8.8 2.9 7.9 1.3 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Pex2_Pex12 PF04757.14 NODE_68924_length_229_cov_538.283505_g60983_i0forward_frame_3 - 2.9 7.4 11.2 3.6 7.1 2.2 2.0 1 1 1 2 2 2 0 Pex2 / Pex12 amino terminal region SOCS PF12610.8 NODE_68924_length_229_cov_538.283505_g60983_i0forward_frame_2 - 0.29 11.6 1.2 23 5.5 0.1 2.1 2 0 0 2 2 2 0 Suppressor of cytokine signalling DUF4024 PF13216.6 NODE_68923_length_229_cov_668.489691_g60982_i0reverse_frame_2 - 4.4 7.3 6.2 0.76 9.8 1.1 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF4024) DUF4440 PF14534.6 NODE_68922_length_229_cov_1562.551546_g60981_i0reverse_frame_3 - 0.00061 20.2 0.0 0.00063 20.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) DUF4530 PF15039.6 NODE_68921_length_230_cov_0.810256_g60980_i0reverse_frame_2 - 0.077 13.1 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4530) UBM PF14377.6 NODE_68921_length_230_cov_0.810256_g60980_i0forward_frame_2 - 0.13 11.8 1.0 0.18 11.3 1.0 1.2 1 0 0 1 1 1 0 Ubiquitin binding region Peptidase_C14 PF00656.22 NODE_68920_length_230_cov_0.810256_g60979_i0reverse_frame_2 - 0.014 15.3 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Caspase domain Lamprin PF06403.11 NODE_68918_length_230_cov_0.820513_g60977_i0forward_frame_3 - 0.29 11.1 3.3 0.32 11.0 3.3 1.1 1 0 0 1 1 1 0 Lamprin Syntaxin-6_N PF09177.11 NODE_68912_length_230_cov_0.933333_g60971_i0forward_frame_2 - 0.069 13.7 3.0 2.6 8.7 0.3 2.0 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Rer1 PF03248.13 NODE_68907_length_230_cov_1.025641_g60966_i0reverse_frame_3 - 0.13 12.0 2.7 0.14 11.9 2.7 1.1 1 0 0 1 1 1 0 Rer1 family Pox_L3_FP4 PF03339.14 NODE_68906_length_230_cov_1.025641_g60965_i0reverse_frame_2 - 0.078 12.0 3.5 0.088 11.8 3.5 1.0 1 0 0 1 1 1 0 Poxvirus L3/FP4 protein DUF802 PF05650.11 NODE_68902_length_230_cov_1.025641_g60961_i0reverse_frame_3 - 0.11 13.0 1.2 0.17 12.4 1.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF802) Caa3_CtaG PF09678.10 NODE_68898_length_230_cov_1.097436_g60957_i0forward_frame_2 - 0.072 12.5 0.1 0.077 12.4 0.1 1.0 1 0 0 1 1 1 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) Pox_I6 PF04595.13 NODE_68896_length_230_cov_1.123077_g60955_i0reverse_frame_3 - 0.00022 20.3 1.7 0.00023 20.2 1.7 1.0 1 0 0 1 1 1 1 Poxvirus I6-like family TMEM206 PF15122.6 NODE_68896_length_230_cov_1.123077_g60955_i0reverse_frame_3 - 0.0077 15.4 1.1 0.0082 15.3 1.1 1.0 1 0 0 1 1 1 1 TMEM206 protein family TERF2_RBM PF16772.5 NODE_68896_length_230_cov_1.123077_g60955_i0reverse_frame_3 - 0.24 10.8 0.7 0.43 10.0 0.7 1.3 1 0 0 1 1 1 0 Telomeric repeat-binding factor 2 Rap1-binding motif DUF4501 PF14946.6 NODE_68896_length_230_cov_1.123077_g60955_i0forward_frame_2 - 0.23 11.5 0.9 0.25 11.4 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Phage_Treg PF04761.12 NODE_68894_length_230_cov_1.138462_g60953_i0forward_frame_3 - 0.085 13.0 0.3 0.13 12.3 0.3 1.3 1 0 0 1 1 1 0 Lactococcus bacteriophage putative transcription regulator MAS20 PF02064.15 NODE_68891_length_230_cov_1.169231_g60950_i0reverse_frame_2 - 0.06 13.4 0.3 0.073 13.2 0.3 1.1 1 0 0 1 1 1 0 MAS20 protein import receptor HIPIP PF01355.17 NODE_68890_length_230_cov_1.184615_g60949_i0reverse_frame_2 - 0.17 12.2 0.0 0.24 11.8 0.0 1.2 1 0 0 1 1 1 0 High potential iron-sulfur protein NitrOD5 PF11537.8 NODE_68886_length_230_cov_1.200000_g60945_i0forward_frame_2 - 0.18 12.0 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Nitrosopumilus output domain 5 BCHF PF07284.11 NODE_68885_length_230_cov_1.210256_g60944_i0forward_frame_2 - 0.029 14.4 4.2 0.03 14.3 4.2 1.1 1 0 0 1 1 1 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) RIH_assoc PF08454.11 NODE_68880_length_230_cov_1.230769_g60939_i0reverse_frame_2 - 1.2e-11 44.3 1.1 2e-11 43.6 1.1 1.4 1 0 0 1 1 1 1 RyR and IP3R Homology associated DTC PF18102.1 NODE_68880_length_230_cov_1.230769_g60939_i0reverse_frame_2 - 0.091 12.9 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 Deltex C-terminal domain PRIMA1 PF16101.5 NODE_68879_length_230_cov_1.230769_g60938_i0reverse_frame_2 - 0.13 12.3 4.6 0.15 12.1 4.6 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 DUF5516 PF17637.2 NODE_68879_length_230_cov_1.230769_g60938_i0forward_frame_3 - 0.0046 16.7 0.4 0.0067 16.2 0.4 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5516) DUF2391 PF09622.10 NODE_68871_length_230_cov_1.271795_g60930_i0forward_frame_3 - 0.043 13.2 0.0 0.048 13.0 0.0 1.0 1 0 0 1 1 1 0 Putative integral membrane protein (DUF2391) AAA_19 PF13245.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 7.6e-08 32.8 0.0 9.2e-08 32.5 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 2.2e-07 30.8 0.0 2.4e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 8.2e-05 22.5 0.0 9.4e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.00021 21.3 0.0 0.00022 21.2 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_16 PF13191.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.00065 20.1 0.0 0.00065 20.1 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.013 15.0 0.0 0.014 14.9 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.021 15.1 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.023 15.3 0.8 1.2 9.7 0.9 2.1 1 1 1 2 2 2 0 AAA domain AAA PF00004.29 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.045 14.2 0.1 0.05 14.0 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TrwB_AAD_bind PF10412.9 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.051 12.5 0.0 0.063 12.2 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DAP3 PF10236.9 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.062 12.5 0.0 0.065 12.4 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_33 PF13671.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.071 13.3 0.3 0.32 11.1 0.3 1.9 1 1 1 2 2 2 0 AAA domain AAA_24 PF13479.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.11 12.2 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.16 11.5 0.1 0.24 10.9 0.1 1.4 1 1 1 2 2 2 0 AAA domain NTPase_1 PF03266.15 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.17 11.8 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 NTPase UvrD-helicase PF00580.21 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.21 11.1 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain DNA_methylase PF00145.17 NODE_68867_length_230_cov_1.343590_g60926_i0reverse_frame_3 - 0.26 10.6 0.0 0.26 10.6 0.0 1.1 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase HSP70 PF00012.20 NODE_68866_length_230_cov_1.348718_g60925_i0reverse_frame_3 - 4.8e-09 35.0 0.0 4.8e-09 35.0 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein M16C_assoc PF08367.11 NODE_68863_length_230_cov_1.358974_g60922_i0forward_frame_3 - 0.53 9.4 2.1 4.1 6.4 0.2 1.9 1 1 1 2 2 2 0 Peptidase M16C associated Bunya_G2 PF03563.13 NODE_68861_length_230_cov_1.369231_g60920_i0reverse_frame_2 - 0.041 13.2 2.6 0.041 13.1 2.6 1.1 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 YacG PF03884.14 NODE_68858_length_230_cov_1.405128_g60917_i0reverse_frame_2 - 0.081 12.7 0.9 0.14 11.9 0.9 1.4 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG CENP-C_C PF11699.8 NODE_68857_length_230_cov_1.415385_g60916_i0forward_frame_2 - 0.054 13.7 0.2 0.061 13.6 0.2 1.1 1 0 0 1 1 1 0 Mif2/CENP-C like PRTase_3 PF15610.6 NODE_68855_length_230_cov_1.435897_g60914_i0forward_frame_2 - 0.002 17.4 0.5 0.0023 17.2 0.5 1.0 1 0 0 1 1 1 1 PRTase ComF-like Baculo_LEF5 PF04838.12 NODE_68855_length_230_cov_1.435897_g60914_i0forward_frame_2 - 0.029 14.4 1.3 0.031 14.3 1.3 1.0 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 Endotoxin_N PF03945.14 NODE_68855_length_230_cov_1.435897_g60914_i0forward_frame_2 - 0.057 13.1 1.0 0.06 13.1 1.0 1.0 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain GreA_GreB_N PF03449.15 NODE_68854_length_230_cov_1.435897_g60913_i0forward_frame_3 - 0.15 12.3 2.7 0.17 12.0 2.7 1.2 1 0 0 1 1 1 0 Transcription elongation factor, N-terminal EIIC-GAT PF03611.14 NODE_68852_length_230_cov_1.482051_g60911_i0reverse_frame_3 - 3.2e-05 23.2 0.1 3.3e-05 23.2 0.1 1.0 1 0 0 1 1 1 1 PTS system sugar-specific permease component zf_Rg PF17915.1 NODE_68852_length_230_cov_1.482051_g60911_i0reverse_frame_2 - 0.067 12.6 1.9 0.1 12.1 1.9 1.3 1 0 0 1 1 1 0 Reverse gyrase zinc finger RRM_5 PF13893.6 NODE_68850_length_230_cov_1.492308_g60909_i0forward_frame_3 - 0.087 12.4 2.3 0.097 12.3 2.3 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MORN PF02493.20 NODE_68850_length_230_cov_1.492308_g60909_i0forward_frame_2 - 1.3e-15 56.3 16.5 2e-06 27.3 1.9 3.6 4 0 0 4 4 4 3 MORN repeat DUF3048_C PF17479.2 NODE_68850_length_230_cov_1.492308_g60909_i0forward_frame_2 - 0.00065 20.1 2.0 0.0037 17.6 0.2 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF3048) C-terminal domain Drf_FH3 PF06367.16 NODE_68849_length_230_cov_1.497436_g60908_i0forward_frame_3 - 0.14 11.8 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Diaphanous FH3 Domain HATPase_c PF02518.26 NODE_68846_length_230_cov_1.548718_g60905_i0reverse_frame_2 - 1.6e-08 35.0 0.3 1.8e-08 34.9 0.3 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 NODE_68846_length_230_cov_1.548718_g60905_i0reverse_frame_2 - 0.041 13.7 0.1 0.041 13.7 0.1 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Glyco_transf_22 PF03901.17 NODE_68844_length_230_cov_1.553846_g60903_i0reverse_frame_3 - 0.032 13.5 2.4 0.032 13.4 2.4 1.0 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family Pes-10 PF07149.11 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.042 12.9 6.1 0.048 12.7 6.1 1.0 1 0 0 1 1 1 0 Pes-10 NPV_P10 PF05531.12 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.061 13.8 0.8 0.072 13.6 0.8 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Glyco_hydro_25 PF01183.20 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.074 13.2 0.6 0.085 13.0 0.6 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 25 Trp_syntA PF00290.20 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.1 11.5 0.4 0.12 11.2 0.4 1.1 1 0 0 1 1 1 0 Tryptophan synthase alpha chain RuvX PF03652.15 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.1 13.0 2.0 0.12 12.7 2.0 1.1 1 0 0 1 1 1 0 Holliday junction resolvase Transferase PF02458.15 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.13 10.9 1.8 0.13 10.9 1.8 1.0 1 0 0 1 1 1 0 Transferase family DAP3 PF10236.9 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.14 11.3 3.4 0.37 9.9 1.2 1.9 1 1 1 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 ThrE PF06738.12 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.22 10.8 0.2 0.24 10.8 0.2 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF5536 PF17688.1 NODE_68841_length_230_cov_1.600000_g60900_i0forward_frame_2 - 0.013 15.4 0.6 0.015 15.2 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5536) DUF1148 PF06618.11 NODE_68837_length_230_cov_1.635897_g60896_i0forward_frame_3 - 0.035 14.2 0.3 0.038 14.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1148) MPS-4 PF17523.2 NODE_68835_length_230_cov_1.641026_g60894_i0reverse_frame_3 - 0.052 13.7 1.6 0.065 13.4 1.6 1.2 1 1 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks319.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks319.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks319.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks319.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PUF PF00806.19 ORF51944 - 1.6e-32 109.3 0.0 0.00012 21.6 0.0 7.3 7 0 0 7 7 7 7 Pumilio-family RNA binding repeat Acyl-CoA_dh_M PF02770.19 ORF47832 - 4.6e-11 42.8 0.0 7.1e-11 42.2 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_ox_N PF14749.6 ORF47832 - 1.7e-09 38.3 0.0 3.6e-09 37.3 0.0 1.6 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal BCDHK_Adom3 PF10436.9 ORF47275 - 2e-28 99.3 0.3 3.3e-28 98.6 0.3 1.3 1 0 0 1 1 1 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase HATPase_c PF02518.26 ORF47275 - 8.1e-08 32.8 0.0 2e-07 31.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF47275 - 0.023 14.5 0.0 0.043 13.6 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Peptidase_M20 PF01546.28 ORF44296 - 2.8e-33 115.4 0.0 4.1e-33 114.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF44296 - 1.5e-25 89.2 0.0 2.6e-25 88.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 ORF44296 - 0.00055 19.7 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M42 PF05343.14 ORF44296 - 0.028 13.4 0.0 0.048 12.7 0.0 1.3 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase vATP-synt_AC39 PF01992.16 ORF44257 - 3e-76 257.1 6.8 3.5e-76 256.9 6.8 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit ATP-cone PF03477.16 ORF44257 - 0.089 13.4 0.9 0.61 10.7 0.2 2.4 2 0 0 2 2 2 0 ATP cone domain Ank_2 PF12796.7 ORF37418 - 8e-12 45.6 0.0 1.8e-11 44.5 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Acetyltransf_1 PF00583.25 ORF37418 - 3e-11 43.6 0.0 1.4e-10 41.4 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Ank_4 PF13637.6 ORF37418 - 1.4e-10 41.5 0.0 2.9e-10 40.5 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF37418 - 5.3e-10 38.7 0.0 6.9e-05 23.0 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_10 PF13673.7 ORF37418 - 7.6e-09 35.6 0.0 1.6e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ank_5 PF13857.6 ORF37418 - 9.8e-07 28.9 0.0 6.7e-05 23.1 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_7 PF13508.7 ORF37418 - 3.4e-06 27.4 0.0 2.6e-05 24.6 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF37418 - 8.5e-06 25.7 0.0 0.0035 17.3 0.0 3.1 3 0 0 3 3 3 1 FR47-like protein Acetyltransf_CG PF14542.6 ORF37418 - 0.00024 21.2 0.1 0.00072 19.6 0.1 1.8 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Ank PF00023.30 ORF37418 - 0.00094 19.5 0.0 0.014 15.8 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Acetyltransf_3 PF13302.7 ORF37418 - 0.15 12.8 0.1 1.5 9.5 0.0 2.3 2 1 0 2 2 2 0 Acetyltransferase (GNAT) domain PEP-utilizers_C PF02896.18 ORF3709 - 3.8e-127 423.4 0.1 4.7e-127 423.1 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF3709 - 0.00012 21.7 0.0 0.00048 19.8 0.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain HpcH_HpaI PF03328.14 ORF3709 - 0.00038 19.7 1.3 0.00045 19.4 0.1 1.7 2 0 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family Aldedh PF00171.22 ORF31397 - 3.9e-102 342.1 0.1 4.4e-102 342.0 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 ORF31397 - 0.036 13.1 0.0 0.047 12.7 0.0 1.2 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) MFS_1 PF07690.16 ORF31139 - 6.3e-32 110.9 48.3 1.2e-19 70.5 28.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF31139 - 0.0019 17.2 4.6 0.0019 17.2 4.6 2.7 1 1 2 3 3 3 1 MFS_1 like family Gly-zipper_Omp PF13488.6 ORF31139 - 3.3 7.8 13.6 3.6 7.7 2.9 3.3 3 0 0 3 3 3 0 Glycine zipper Peptidase_S10 PF00450.22 ORF28809 - 6.7e-73 246.5 0.4 2.3e-38 132.7 1.7 2.0 1 1 1 2 2 2 2 Serine carboxypeptidase Cytochrome_cB PF11783.8 ORF28809 - 0.024 14.5 0.2 0.041 13.8 0.2 1.4 1 0 0 1 1 1 0 Cytochrome c bacterial Metallophos PF00149.28 ORF20045 - 1.2e-13 52.0 1.7 1.9e-13 51.4 1.7 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF20045 - 0.00025 21.3 0.0 0.0009 19.5 0.0 1.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_C PF14008.6 ORF20045 - 0.078 13.8 0.2 0.19 12.6 0.2 1.6 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C UNC-93 PF05978.16 ORF16771 - 2.2e-05 24.2 5.2 5.2e-05 23.0 5.2 1.6 1 0 0 1 1 1 1 Ion channel regulatory protein UNC-93 DUF996 PF06195.13 ORF16771 - 1 9.6 6.7 0.86 9.9 0.1 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF996) WD40 PF00400.32 ORF15008 - 2.5e-42 142.0 13.7 2.9e-07 31.1 0.5 7.6 8 0 0 8 8 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF15008 - 3.9e-14 52.7 0.0 0.00094 19.4 0.0 5.8 1 1 5 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF15008 - 2.4e-07 30.0 3.6 0.49 9.3 0.0 5.3 1 1 4 6 6 6 4 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 ORF15008 - 4.2e-05 23.0 0.0 0.002 17.5 0.0 2.3 2 0 0 2 2 2 1 WD40-like domain PD40 PF07676.12 ORF15008 - 4.4e-05 23.3 0.2 2.2 8.3 0.0 4.2 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat SGL PF08450.12 ORF15008 - 9.7e-05 22.1 0.4 0.00055 19.6 0.4 2.2 1 1 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Proteasome_A_N PF10584.9 ORF15008 - 0.00026 20.6 0.5 0.3 10.8 0.0 3.8 3 0 0 3 3 3 1 Proteasome subunit A N-terminal signature Nbas_N PF15492.6 ORF15008 - 0.00078 18.9 0.4 1.7 7.9 0.0 3.8 1 1 3 4 4 4 1 Neuroblastoma-amplified sequence, N terminal Nup160 PF11715.8 ORF15008 - 0.02 13.6 0.3 0.21 10.2 0.1 2.1 1 1 1 2 2 2 0 Nucleoporin Nup120/160 eIF2A PF08662.11 ORF15008 - 0.053 13.4 0.0 0.23 11.3 0.0 2.0 2 1 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A Rad60-SLD PF11976.8 ORF15008 - 0.11 12.4 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ret2_MD PF18528.1 ORF15008 - 0.13 12.7 0.0 1.5 9.2 0.0 2.6 2 1 0 2 2 2 0 RNA editing 3' terminal uridylyl transferase 2 middle domain ubiquitin PF00240.23 ORF15008 - 0.14 11.9 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin family Tubulin PF00091.25 ORF14233 - 3.2e-42 144.9 0.6 4.8e-42 144.4 0.6 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 ORF14233 - 8.5e-38 128.6 1.2 2.6e-37 127.0 1.2 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain NAD_binding_10 PF13460.6 ORF14233 - 0.0026 17.7 0.2 0.008 16.1 0.2 1.8 1 0 0 1 1 1 1 NAD(P)H-binding HATPase_c PF02518.26 ORF14233 - 0.092 13.3 0.2 0.26 11.8 0.0 1.8 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tubulin_2 PF13809.6 ORF14233 - 0.18 10.9 8.1 3.8 6.6 3.0 2.5 1 1 1 2 2 2 0 Tubulin like Abhydro_lipase PF04083.16 ORF106434 - 4.3e-17 61.4 0.6 1.9e-16 59.4 0.0 2.4 3 0 0 3 3 3 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF106434 - 4.3e-14 52.8 0.1 4.1e-13 49.6 0.0 2.0 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF106434 - 2.8e-06 26.8 0.0 0.00011 21.6 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 FSH1 PF03959.13 ORF106434 - 0.021 14.5 0.1 0.35 10.5 0.0 2.1 2 0 0 2 2 2 0 Serine hydrolase (FSH1) cNMP_binding PF00027.29 ORF103473 - 4.5e-07 29.9 0.0 1.7e-06 28.0 0.0 2.0 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain OsmC PF02566.19 ORF101799 - 0.56 10.7 0.0 0.56 10.7 0.0 3.1 3 0 0 3 3 3 0 OsmC-like protein Euplotes_phero PF05842.11 NODE_15007_length_1148_cov_221.681941_g9983_i1reverse_frame_3 - 0.13 12.8 8.3 0.06 13.9 5.6 1.8 1 1 0 1 1 1 0 Euplotes octocarinatus mating pheromone protein Zip PF02535.22 NODE_15007_length_1148_cov_221.681941_g9983_i1reverse_frame_3 - 2.3 7.4 4.2 3.6 6.7 4.2 1.4 1 0 0 1 1 1 0 ZIP Zinc transporter Autophagy_C PF10381.9 NODE_14991_length_1149_cov_7.855476_g11310_i0reverse_frame_3 - 1 8.9 4.6 21 4.7 0.9 2.8 2 0 0 2 2 2 0 Autophagocytosis associated protein C-terminal ABC_tran PF00005.27 ORF9269 - 3.6e-32 111.8 0.0 6.1e-32 111.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF9269 - 1.7e-06 27.9 0.0 2.1e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF9269 - 2.9e-05 23.6 0.1 0.013 14.9 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 ORF9269 - 0.00066 19.6 0.0 0.0013 18.7 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_18 PF13238.6 ORF9269 - 0.00097 19.7 0.1 0.029 14.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 ORF9269 - 0.0014 18.9 0.2 0.0059 16.9 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 ORF9269 - 0.0016 19.0 0.0 0.0027 18.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 ORF9269 - 0.0038 17.1 0.0 0.0056 16.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF9269 - 0.0043 16.8 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain T2SSE PF00437.20 ORF9269 - 0.0094 15.0 0.0 0.018 14.1 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein NB-ARC PF00931.22 ORF9269 - 0.017 14.3 0.1 0.046 12.9 0.1 1.7 1 1 0 1 1 1 0 NB-ARC domain IstB_IS21 PF01695.17 ORF9269 - 0.03 14.1 0.0 7.7 6.2 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF9269 - 0.036 14.4 0.0 0.2 12.0 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain Rad17 PF03215.15 ORF9269 - 0.13 12.2 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain MobB PF03205.14 ORF9269 - 0.13 12.1 0.0 0.49 10.3 0.0 2.0 1 1 1 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DEAD PF00270.29 ORF9269 - 0.17 11.7 0.0 0.4 10.4 0.0 1.6 1 1 0 1 1 1 0 DEAD/DEAH box helicase DUF87 PF01935.17 ORF9269 - 0.18 11.9 0.0 0.39 10.8 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain BTB PF00651.31 ORF91734 - 2.1e-21 76.2 1.5 1e-19 70.8 0.1 2.4 1 1 1 2 2 2 2 BTB/POZ domain Ank_2 PF12796.7 ORF90558 - 2.1e-58 194.8 3.3 1.7e-15 57.3 0.0 4.6 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF90558 - 1e-39 134.3 4.7 6.9e-11 42.5 0.0 5.6 3 2 3 6 6 6 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF90558 - 2.2e-34 113.6 2.7 0.0029 18.0 0.0 9.1 9 0 0 9 9 9 6 Ankyrin repeat Ank PF00023.30 ORF90558 - 1.4e-30 104.4 7.7 0.00029 21.2 0.0 8.6 8 1 0 8 8 8 7 Ankyrin repeat Ank_5 PF13857.6 ORF90558 - 2.7e-28 97.7 2.8 6.8e-06 26.3 0.0 6.2 1 1 4 6 6 6 6 Ankyrin repeats (many copies) bZIP_1 PF00170.21 ORF84787 - 6e-07 29.5 13.3 6e-07 29.5 13.3 3.1 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF84787 - 1.4e-06 28.2 13.4 1.4e-06 28.2 13.4 3.0 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF84787 - 0.041 13.7 1.1 0.081 12.7 1.1 1.4 1 0 0 1 1 1 0 Peptidase M76 family Chordopox_A30L PF06015.12 ORF77114 - 0.061 13.1 0.1 0.14 12.0 0.1 1.6 1 0 0 1 1 1 0 Chordopoxvirus A30L protein PPP4R2 PF09184.11 ORF76500 - 0.12 11.9 5.3 0.17 11.4 5.3 1.2 1 0 0 1 1 1 0 PPP4R2 SDA1 PF05285.12 ORF76500 - 0.28 10.6 7.2 0.38 10.1 7.2 1.2 1 0 0 1 1 1 0 SDA1 Sigma70_ner PF04546.13 ORF76500 - 5.3 6.9 9.2 8.6 6.2 9.2 1.3 1 0 0 1 1 1 0 Sigma-70, non-essential region Nop14 PF04147.12 ORF76500 - 7.2 4.7 8.4 9.2 4.3 8.4 1.1 1 0 0 1 1 1 0 Nop14-like family Prefoldin_2 PF01920.20 ORF74391 - 0.0027 17.7 2.4 0.0027 17.7 2.4 4.4 3 2 3 6 6 6 1 Prefoldin subunit Spc7 PF08317.11 ORF74391 - 0.077 11.9 28.6 0.1 11.4 10.3 2.6 1 1 1 2 2 2 0 Spc7 kinetochore protein COG2 PF06148.11 ORF74391 - 0.13 12.3 15.4 0.062 13.4 1.1 3.7 3 1 0 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 Golgin_A5 PF09787.9 ORF74391 - 0.28 10.6 21.9 0.51 9.8 11.0 2.3 2 0 0 2 2 2 0 Golgin subfamily A member 5 Exonuc_VII_L PF02601.15 ORF74391 - 0.43 10.1 16.7 0.6 9.6 8.7 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit CorA PF01544.18 ORF74391 - 0.44 9.8 5.8 1.2 8.4 1.7 2.2 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein ApoLp-III PF07464.11 ORF74391 - 0.66 10.1 19.1 0.035 14.2 5.8 3.2 3 1 0 3 3 3 0 Apolipophorin-III precursor (apoLp-III) Baculo_PEP_C PF04513.12 ORF74391 - 0.71 9.9 11.9 1.5 8.8 0.7 3.5 3 2 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Folliculin PF11704.8 ORF74391 - 1.1 9.2 6.8 0.51 10.2 1.8 2.2 2 0 0 2 2 2 0 Vesicle coat protein involved in Golgi to plasma membrane transport DUF4407 PF14362.6 ORF74391 - 1.4 8.2 32.9 0.24 10.7 7.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF812 PF05667.11 ORF74391 - 1.8 7.3 28.6 0.019 13.9 14.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Carbpep_Y_N PF05388.11 ORF74391 - 3.7 8.1 8.5 0.57 10.7 0.3 3.0 2 2 1 3 3 3 0 Carboxypeptidase Y pro-peptide NPV_P10 PF05531.12 ORF74391 - 4.7 7.8 13.1 4.3 7.9 2.1 4.3 4 1 1 5 5 5 0 Nucleopolyhedrovirus P10 protein Fez1 PF06818.15 ORF74391 - 5.9 7.3 26.5 0.75 10.2 12.6 2.5 1 1 0 2 2 2 0 Fez1 TMPIT PF07851.13 ORF74391 - 7.8 5.6 12.3 0.82 8.8 4.0 2.2 2 0 0 2 2 2 0 TMPIT-like protein Flagellin_C PF00700.21 ORF74391 - 9.9 6.6 13.3 1.3 9.4 1.3 4.1 4 1 0 4 4 4 0 Bacterial flagellin C-terminal helical region WD40 PF00400.32 ORF74045 - 1.7e-12 47.6 19.9 0.0067 17.3 0.6 6.3 7 0 0 7 7 7 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF74045 - 2.7e-05 24.4 0.2 0.17 12.2 0.0 3.9 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Kelch_2 PF07646.15 ORF74045 - 0.024 14.6 0.1 3.7 7.7 0.0 3.2 2 0 0 2 2 2 0 Kelch motif Exo_endo_phos PF03372.23 ORF71791 - 6.7e-11 42.2 0.0 1.3e-10 41.2 0.0 1.5 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Nif11 PF07862.11 ORF71791 - 0.1 12.9 0.0 0.28 11.5 0.0 1.7 1 0 0 1 1 1 0 Nif11 domain Arg_decarbox_C PF17944.1 ORF71791 - 0.14 12.7 0.0 0.9 10.2 0.0 2.2 2 0 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension Exo_endo_phos_2 PF14529.6 ORF71791 - 0.17 11.8 0.0 0.34 10.8 0.0 1.6 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase Kelch_4 PF13418.6 ORF68432 - 6.5e-18 64.5 2.8 1.2e-05 25.2 0.0 5.6 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF68432 - 1.3e-17 63.1 2.2 1.2e-06 28.0 0.1 5.0 5 0 0 5 5 5 3 Kelch motif Kelch_6 PF13964.6 ORF68432 - 1.9e-16 59.6 0.7 0.00028 21.1 0.0 5.3 4 1 1 5 5 5 3 Kelch motif Kelch_3 PF13415.6 ORF68432 - 8e-15 54.7 2.1 1.5e-06 28.3 0.0 3.5 4 1 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF68432 - 2.4e-07 30.6 0.3 0.41 10.7 0.1 3.7 3 0 0 3 3 3 3 Kelch motif Kelch_2 PF07646.15 ORF68432 - 0.0017 18.3 0.1 3.6 7.7 0.0 3.9 3 1 0 3 3 3 1 Kelch motif WYL_2 PF10902.8 ORF68432 - 0.022 15.1 2.3 7.7 7.0 0.2 3.3 3 0 0 3 3 3 0 WYL_2, Sm-like SH3 beta-barrel fold DUF5371 PF17341.2 ORF68432 - 0.28 11.4 0.2 0.28 11.4 0.2 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5371) EF-hand_7 PF13499.6 ORF68432 - 0.74 10.3 3.9 1.7 9.2 2.9 2.2 2 1 0 2 2 2 0 EF-hand domain pair HGTP_anticodon PF03129.20 ORF62070 - 6.2e-21 74.4 0.0 2.3e-20 72.5 0.0 2.0 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 ORF62070 - 4.9e-11 42.9 0.1 1.4e-10 41.4 0.1 1.7 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 ORF62070 - 0.051 12.7 0.0 0.058 12.5 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) TIR_2 PF13676.6 ORF62070 - 0.087 13.4 1.2 4.3 8.0 0.1 3.1 2 1 2 4 4 4 0 TIR domain POLO_box PF00659.18 ORF55465 - 3.5e-34 116.8 7.7 1.5e-17 63.6 0.3 3.0 2 1 0 2 2 2 2 POLO box duplicated region Pkinase PF00069.25 ORF55465 - 5.4e-07 29.2 0.0 1.4e-06 27.9 0.0 1.8 1 0 0 1 1 1 1 Protein kinase domain DUF3919 PF13057.6 ORF55465 - 0.0021 17.7 2.2 0.0024 17.5 0.6 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF3919) Plk4_PB2 PF18409.1 ORF55465 - 0.19 12.4 1.2 0.6 10.8 0.2 2.3 2 0 0 2 2 2 0 Polo-like Kinase 4 Polo Box 2 WD40 PF00400.32 ORF55037 - 0.13 13.2 17.2 2 9.4 0.0 6.4 7 0 0 7 7 7 0 WD domain, G-beta repeat Acyl-CoA_dh_1 PF00441.24 ORF50630 - 7.9e-29 100.8 2.8 1.4e-28 100.0 2.8 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 ORF50630 - 3.7e-27 95.2 0.0 7.3e-27 94.3 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 ORF50630 - 3.5e-22 78.4 0.0 7e-22 77.5 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 ORF50630 - 2.6e-08 34.2 0.5 4.2e-08 33.5 0.5 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain RIO1 PF01163.22 ORF49522 - 1.1e-44 152.2 0.2 1.1e-44 152.2 0.2 1.9 2 0 0 2 2 2 1 RIO1 family APH PF01636.23 ORF49522 - 4.6e-08 33.3 0.9 0.00021 21.3 0.2 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 ORF49522 - 8.2e-08 31.8 5.3 1e-05 25.0 0.2 3.3 2 1 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family Rio2_N PF09202.11 ORF49522 - 1.4e-06 28.5 2.3 1.5e-06 28.4 0.4 2.1 3 0 0 3 3 3 1 Rio2, N-terminal Beta-lactamase PF00144.24 ORF45537 - 2.9e-15 56.4 0.0 5e-15 55.6 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase Tub PF01167.18 ORF43062 - 3.3e-29 102.3 0.0 4.9e-29 101.8 0.0 1.2 1 0 0 1 1 1 1 Tub family Metallophos PF00149.28 ORF4004 - 1.8e-12 48.2 0.6 3e-12 47.5 0.6 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF4004 - 0.048 12.7 1.7 0.15 11.0 0.5 2.0 2 0 0 2 2 2 0 PhoD-like phosphatase mTERF PF02536.14 ORF34340 - 1.1e-31 110.0 0.0 7.1e-29 100.7 0.0 2.2 1 1 1 2 2 2 2 mTERF DUF1127 PF06568.11 ORF34340 - 0.017 14.9 0.0 12 5.7 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF1127) TAL_effector PF03377.13 ORF34340 - 0.036 14.4 0.0 20 5.6 0.0 3.6 4 0 0 4 4 4 0 TAL effector repeat PI_PP_I PF18363.1 ORF34340 - 0.074 13.2 0.0 3.2 8.0 0.0 2.8 1 1 2 3 3 3 0 Phosphoinositide phosphatase insertion domain Pkinase PF00069.25 ORF30218 - 1.8e-73 247.2 0.1 2.7e-73 246.6 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30218 - 1.4e-37 129.4 0.0 2e-37 128.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Choline_kinase PF01633.20 ORF30218 - 9.8e-07 28.6 0.2 9.8e-07 28.6 0.2 1.9 2 0 0 2 2 2 1 Choline/ethanolamine kinase Kdo PF06293.14 ORF30218 - 7.9e-06 25.4 0.0 1.6e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF30218 - 1e-05 25.0 0.3 0.00021 20.7 0.0 2.6 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF30218 - 9.4e-05 21.4 0.0 0.00022 20.2 0.0 1.4 1 1 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF30218 - 0.00016 21.7 0.0 0.0011 19.0 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family FTA2 PF13095.6 ORF30218 - 0.0047 16.6 0.1 0.013 15.1 0.1 1.9 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 ORF30218 - 0.007 16.0 0.1 0.007 16.0 0.1 2.6 3 0 0 3 3 3 1 RIO1 family CMAS PF02353.20 ORF2742 - 2.6e-106 354.9 0.3 3.5e-106 354.5 0.3 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 ORF2742 - 1.2e-15 58.0 0.0 2.2e-15 57.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF2742 - 1.7e-14 54.2 0.0 3.3e-14 53.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF2742 - 8.6e-13 48.4 0.0 1.3e-12 47.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF2742 - 1.6e-10 41.0 0.0 2.7e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF2742 - 2.4e-08 34.6 0.0 4.9e-08 33.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF2742 - 5.1e-06 26.4 0.0 7.5e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 ORF2742 - 7.7e-05 22.3 0.0 0.00013 21.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.19 ORF2742 - 0.00021 21.5 0.0 0.0003 20.9 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase MetW PF07021.12 ORF2742 - 0.00082 19.0 0.1 0.0014 18.3 0.1 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.6 ORF2742 - 0.0011 18.9 0.0 0.0018 18.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 ORF2742 - 0.0017 18.1 0.0 0.033 13.8 0.0 2.2 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) TehB PF03848.14 ORF2742 - 0.0048 16.3 0.0 0.0071 15.8 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB DOT1 PF08123.13 ORF2742 - 0.022 14.3 0.1 0.041 13.4 0.1 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 RrnaAD PF00398.20 ORF2742 - 0.044 12.8 0.0 0.08 12.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_9 PF08003.11 ORF2742 - 0.09 11.7 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_18 PF12847.7 ORF2742 - 0.11 12.5 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain ADH_zinc_N PF00107.26 ORF2742 - 0.13 12.3 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding dehydrogenase GCD14 PF08704.10 ORF2742 - 0.14 11.9 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_15 PF09445.10 ORF2742 - 0.14 11.7 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_4 PF02390.17 ORF2742 - 0.18 11.3 0.0 0.29 10.6 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase PPR_2 PF13041.6 ORF25658 - 2.3e-42 143.0 2.3 6.7e-08 32.6 0.0 8.8 5 4 4 9 9 9 8 PPR repeat family PPR PF01535.20 ORF25658 - 2.4e-40 134.0 13.4 0.00066 19.8 0.0 10.2 10 0 0 10 10 10 9 PPR repeat PPR_3 PF13812.6 ORF25658 - 2.2e-38 130.1 0.0 2e-09 37.4 0.0 6.4 5 1 1 6 6 6 6 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF25658 - 3.6e-30 103.4 0.0 4.1e-06 26.4 0.0 8.4 9 0 0 9 9 9 5 PPR repeat PPR_long PF17177.4 ORF25658 - 3.3e-23 82.2 1.8 2e-05 24.1 0.0 5.0 1 1 4 5 5 5 5 Pentacotripeptide-repeat region of PRORP TPR_14 PF13428.6 ORF25658 - 3.7e-09 36.6 24.1 1.2 10.2 0.2 9.5 5 3 5 10 10 10 3 Tetratricopeptide repeat TPR_4 PF07721.14 ORF25658 - 2.3e-06 27.7 24.4 0.11 13.2 1.0 8.5 9 0 0 9 9 9 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF25658 - 0.00099 19.6 8.2 6.5 7.4 0.3 5.9 3 3 5 8 8 8 2 Tetratricopeptide repeat B12-binding_2 PF02607.17 ORF25658 - 0.04 14.3 0.9 18 5.9 0.1 3.6 3 0 0 3 3 3 0 B12 binding domain Clathrin PF00637.20 ORF25658 - 0.12 12.3 0.0 2.9 7.7 0.1 2.8 3 0 0 3 3 3 0 Region in Clathrin and VPS TPR_16 PF13432.6 ORF25658 - 0.14 12.9 20.8 3.1 8.5 0.9 6.9 7 1 1 8 8 7 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF25658 - 0.31 11.4 6.4 19 5.8 0.4 4.9 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF25658 - 1.4 8.9 9.5 1.3 9.0 0.1 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat GntP_permease PF02447.16 ORF23406 - 8.5e-139 463.0 46.0 1e-138 462.8 46.0 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 ORF23406 - 4.5e-11 42.5 58.1 1.1e-10 41.3 58.1 1.6 1 1 0 1 1 1 1 Citrate transporter DctM PF06808.12 ORF23406 - 0.00043 19.2 20.7 0.00043 19.2 20.7 2.1 1 1 1 2 2 2 1 Tripartite ATP-independent periplasmic transporter, DctM component Na_H_antiport_2 PF13726.6 ORF23406 - 0.0028 17.7 11.0 0.0028 17.7 11.0 3.5 4 0 0 4 4 4 2 Na+-H+ antiporter family Metallophos PF00149.28 ORF18469 - 1.8e-12 48.2 0.6 3e-12 47.5 0.6 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF18469 - 0.048 12.7 1.7 0.15 11.0 0.5 2.0 2 0 0 2 2 2 0 PhoD-like phosphatase Prefoldin_2 PF01920.20 ORF17093 - 0.0027 17.7 2.4 0.0027 17.7 2.4 4.4 3 2 3 6 6 6 1 Prefoldin subunit Spc7 PF08317.11 ORF17093 - 0.077 11.9 28.6 0.1 11.4 10.3 2.6 1 1 1 2 2 2 0 Spc7 kinetochore protein COG2 PF06148.11 ORF17093 - 0.13 12.3 15.4 0.062 13.4 1.1 3.7 3 1 0 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 Golgin_A5 PF09787.9 ORF17093 - 0.28 10.6 21.9 0.51 9.8 11.0 2.3 2 0 0 2 2 2 0 Golgin subfamily A member 5 Exonuc_VII_L PF02601.15 ORF17093 - 0.43 10.1 16.7 0.6 9.6 8.7 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit CorA PF01544.18 ORF17093 - 0.44 9.8 5.8 1.2 8.4 1.7 2.2 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein ApoLp-III PF07464.11 ORF17093 - 0.66 10.1 19.1 0.035 14.2 5.8 3.2 3 1 0 3 3 3 0 Apolipophorin-III precursor (apoLp-III) Baculo_PEP_C PF04513.12 ORF17093 - 0.71 9.9 11.9 1.5 8.8 0.7 3.5 3 2 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Folliculin PF11704.8 ORF17093 - 1.1 9.2 6.8 0.51 10.2 1.8 2.2 2 0 0 2 2 2 0 Vesicle coat protein involved in Golgi to plasma membrane transport DUF4407 PF14362.6 ORF17093 - 1.4 8.2 32.9 0.24 10.7 7.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF812 PF05667.11 ORF17093 - 1.8 7.3 28.6 0.019 13.9 14.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Carbpep_Y_N PF05388.11 ORF17093 - 3.7 8.1 8.5 0.57 10.7 0.3 3.0 2 2 1 3 3 3 0 Carboxypeptidase Y pro-peptide NPV_P10 PF05531.12 ORF17093 - 4.7 7.8 13.1 4.3 7.9 2.1 4.3 4 1 1 5 5 5 0 Nucleopolyhedrovirus P10 protein Fez1 PF06818.15 ORF17093 - 5.9 7.3 26.5 0.75 10.2 12.6 2.5 1 1 0 2 2 2 0 Fez1 TMPIT PF07851.13 ORF17093 - 7.8 5.6 12.3 0.82 8.8 4.0 2.2 2 0 0 2 2 2 0 TMPIT-like protein Flagellin_C PF00700.21 ORF17093 - 9.9 6.6 13.3 1.3 9.4 1.3 4.1 4 1 0 4 4 4 0 Bacterial flagellin C-terminal helical region Peptidase_C1 PF00112.23 ORF109580 - 3.1e-44 151.7 9.2 4.2e-44 151.2 9.2 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF109580 - 2.6e-12 47.0 6.8 6e-12 45.8 6.8 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF109580 - 1.4e-06 27.4 2.0 0.00019 20.4 0.2 2.4 2 0 0 2 2 2 2 Peptidase C1-like family Atg29_N PF18388.1 ORF109580 - 0.091 12.6 0.2 1.1 9.2 0.1 2.2 2 0 0 2 2 2 0 Atg29 N-terminal domain Amino_oxidase PF01593.24 ORF108733 - 5.9e-18 65.4 0.3 1.1e-17 64.5 0.1 1.5 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Toxin_27 PF08099.11 NODE_15194_length_1141_cov_4.583183_g11467_i0reverse_frame_1 - 1.3 9.2 5.2 5.7 7.1 1.4 2.5 2 0 0 2 2 2 0 Scorpion calcine family Autophagy_C PF10381.9 NODE_15130_length_1144_cov_17.445446_g11310_i1reverse_frame_3 - 1.1 8.8 4.6 21 4.7 0.9 2.7 2 0 0 2 2 2 0 Autophagocytosis associated protein C-terminal zf-RING_UBOX PF13445.6 NODE_15126_length_1144_cov_119.190261_g11416_i0forward_frame_2 - 0.0023 17.9 5.2 0.0069 16.4 5.2 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 NODE_15126_length_1144_cov_119.190261_g11416_i0forward_frame_2 - 0.0057 16.9 5.8 0.014 15.7 5.8 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_15126_length_1144_cov_119.190261_g11416_i0forward_frame_2 - 0.008 16.5 8.5 0.027 14.8 8.5 1.9 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_15126_length_1144_cov_119.190261_g11416_i0forward_frame_2 - 0.025 14.4 5.7 0.074 12.9 5.7 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 NODE_15126_length_1144_cov_119.190261_g11416_i0forward_frame_2 - 0.03 14.1 4.9 0.067 13.0 4.9 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_2 PF13923.6 NODE_15126_length_1144_cov_119.190261_g11416_i0forward_frame_2 - 0.033 14.0 1.9 0.11 12.4 1.9 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_15126_length_1144_cov_119.190261_g11416_i0forward_frame_2 - 0.11 12.1 4.2 0.26 11.0 4.2 1.6 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 NODE_15126_length_1144_cov_119.190261_g11416_i0forward_frame_2 - 2.9 8.1 8.9 0.24 11.6 3.6 2.0 2 0 0 2 2 2 0 FANCL C-terminal domain DUF4215 PF13948.6 ORF82374 - 3.1e-15 56.3 57.3 1.5e-06 28.5 14.7 4.6 3 1 1 4 4 4 3 Domain of unknown function (DUF4215) Ank_5 PF13857.6 ORF71595 - 2.2e-21 75.6 1.6 2.4e-09 37.3 0.0 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF71595 - 1.8e-20 73.3 1.2 1.3e-13 51.3 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF71595 - 5.4e-19 68.3 3.7 6.8e-13 48.9 0.2 3.7 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF71595 - 6e-13 47.7 0.9 0.067 13.8 0.1 4.6 4 0 0 4 4 4 4 Ankyrin repeat Ank PF00023.30 ORF71595 - 1.2e-12 47.7 0.9 0.0018 18.7 0.0 3.8 4 0 0 4 4 4 3 Ankyrin repeat DUF5020 PF16412.5 ORF71595 - 0.15 11.9 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5020) EF-hand_7 PF13499.6 ORF69748 - 0.13 12.7 0.1 0.55 10.7 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain pair YfhD PF14151.6 ORF69748 - 0.26 11.5 2.5 0.45 10.7 2.5 1.3 1 0 0 1 1 1 0 YfhD-like protein Asp PF00026.23 ORF60906 - 3.4e-82 276.4 6.7 4.2e-82 276.1 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF60906 - 4.3e-11 43.4 3.2 2.9e-09 37.4 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF60906 - 9.2e-06 25.5 0.0 2.8e-05 23.9 0.0 1.8 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal AIRS_C PF02769.22 ORF5981 - 3.9e-24 85.5 0.9 1.8e-23 83.4 0.9 2.0 1 1 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF5981 - 2.1e-20 73.2 0.2 5.8e-20 71.8 0.2 1.8 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Oxysterol_BP PF01237.18 ORF55027 - 1.8e-37 129.1 5.4 8.1e-33 113.8 0.7 2.1 1 1 1 2 2 2 2 Oxysterol-binding protein DUF4809 PF16067.5 ORF55027 - 0.026 14.7 0.0 0.056 13.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4809) Ank_2 PF12796.7 ORF47783 - 2.2e-30 105.0 0.3 2.6e-11 44.0 0.1 3.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF47783 - 7.7e-23 80.6 0.8 5.5e-07 30.0 0.1 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF47783 - 5.2e-21 74.4 1.4 3.5e-06 27.2 0.1 4.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF47783 - 7.2e-19 65.9 0.7 0.033 14.7 0.0 5.5 5 0 0 5 5 5 5 Ankyrin repeat Ank PF00023.30 ORF47783 - 8.7e-18 63.9 3.2 0.0025 18.2 0.0 5.4 5 0 0 5 5 5 4 Ankyrin repeat AAA_14 PF13173.6 ORF44697 - 0.031 14.3 0.0 0.12 12.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain DnaB_bind PF10410.9 ORF44697 - 0.05 13.8 0.0 2.1 8.6 0.0 2.6 2 0 0 2 2 2 0 DnaB-helicase binding domain of primase Pkinase PF00069.25 ORF43169 - 6.3e-51 173.3 4.0 7.5e-50 169.7 0.6 2.9 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF43169 - 4.6e-30 104.8 0.1 7.8e-22 77.8 0.4 2.2 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF43169 - 3.1e-05 23.4 0.2 0.001 18.4 0.1 2.3 2 0 0 2 2 2 1 Kinase-like APH PF01636.23 ORF43169 - 0.086 12.7 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF43169 - 0.11 11.3 0.0 0.11 11.3 0.0 1.5 2 0 0 2 2 2 0 Fungal protein kinase XRN_M PF17846.1 ORF42843 - 4.6e-86 289.5 0.0 5.6e-86 289.2 0.0 1.0 1 0 0 1 1 1 1 Xrn1 helical domain Peripla_BP_3 PF13377.6 ORF41663 - 0.0025 18.2 0.1 0.038 14.3 0.0 2.6 3 0 0 3 3 3 1 Periplasmic binding protein-like domain TMEM65 PF10507.9 ORF35241 - 4.8e-40 135.9 4.8 4.8e-40 135.9 4.8 1.7 2 0 0 2 2 2 1 Transmembrane protein 65 GAF PF01590.26 ORF35241 - 6.4e-09 36.5 0.0 3e-08 34.4 0.0 2.0 1 1 0 1 1 1 1 GAF domain GAF_2 PF13185.6 ORF35241 - 0.0021 18.4 0.0 0.0039 17.5 0.0 1.6 1 0 0 1 1 1 1 GAF domain C_GCAxxG_C_C PF09719.10 ORF35241 - 0.14 12.5 1.1 0.53 10.6 0.6 2.2 1 1 1 2 2 2 0 Putative redox-active protein (C_GCAxxG_C_C) TMF_DNA_bd PF12329.8 ORF33723 - 0.029 14.4 3.3 0.029 14.4 3.3 6.8 4 3 2 6 6 6 0 TATA element modulatory factor 1 DNA binding Clp_N PF02861.20 ORF33723 - 0.037 14.1 0.1 0.14 12.3 0.1 2.1 1 0 0 1 1 1 0 Clp amino terminal domain, pathogenicity island component HTH_7 PF02796.15 ORF33723 - 0.12 12.4 1.2 4.7 7.4 0.0 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain of resolvase BTB PF00651.31 ORF33088 - 8.7e-21 74.2 3.8 9.3e-20 70.9 0.6 2.6 1 1 1 2 2 2 2 BTB/POZ domain CUE PF02845.16 ORF27133 - 1.6e-06 27.7 0.1 5.8e-06 25.9 0.1 2.0 1 0 0 1 1 1 1 CUE domain Ly49 PF08391.10 ORF25046 - 0.0012 19.2 9.0 0.0012 19.2 9.0 4.1 1 1 4 5 5 5 1 Ly49-like protein, N-terminal region T2SSF PF00482.23 ORF25046 - 0.0057 16.6 0.5 0.029 14.3 0.5 2.2 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein F IQ PF00612.27 ORF25046 - 0.03 14.1 0.8 0.062 13.1 0.8 1.6 1 0 0 1 1 1 0 IQ calmodulin-binding motif Fibrillarin PF01269.17 ORF1925 - 0.0075 15.4 0.0 0.049 12.7 0.0 1.9 2 0 0 2 2 2 1 Fibrillarin Methyltransf_24 PF13578.6 ORF1925 - 0.069 14.2 0.0 0.15 13.1 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain Ribosomal_S8 PF00410.19 ORF17893 - 7.8 6.5 7.3 1.8 8.5 2.4 2.4 2 1 0 2 2 2 0 Ribosomal protein S8 Pyr_redox_2 PF07992.14 ORF17637 - 0.014 14.7 0.0 0.019 14.2 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF1302 PF06980.11 ORF17637 - 0.078 11.6 0.0 0.11 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1302) PH PF00169.29 ORF16613 - 0.00099 19.6 0.5 0.00099 19.6 0.5 3.0 3 1 0 3 3 3 1 PH domain PH_9 PF15410.6 ORF16613 - 0.17 12.2 4.2 0.4 11.1 0.1 3.1 2 1 1 3 3 3 0 Pleckstrin homology domain ZapA PF05164.13 ORF16613 - 0.34 11.4 0.0 0.34 11.4 0.0 2.5 4 0 0 4 4 4 0 Cell division protein ZapA Ank_2 PF12796.7 ORF16290 - 1.3e-29 102.6 0.1 1.2e-09 38.7 0.0 4.0 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF16290 - 3.5e-21 75.3 2.0 6.8e-05 23.3 0.0 5.6 4 2 1 6 6 6 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF16290 - 7.9e-15 54.7 9.6 0.016 15.5 0.0 6.6 5 3 2 7 7 7 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF16290 - 2.4e-14 52.0 4.0 0.25 12.0 0.0 7.5 8 0 0 8 8 8 5 Ankyrin repeat Ank PF00023.30 ORF16290 - 4.8e-13 48.9 16.5 0.23 12.0 0.1 7.3 6 1 1 7 7 7 6 Ankyrin repeat ubiquitin PF00240.23 ORF16290 - 5.5e-06 26.0 0.0 9.4e-06 25.3 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family Peptidase_S10 PF00450.22 ORF112001 - 5.8e-97 325.7 0.7 7.1e-97 325.5 0.7 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase ScsC_N PF18312.1 ORF112001 - 0.34 10.7 1.8 3.3 7.6 0.1 2.4 2 0 0 2 2 2 0 Copper resistance protein ScsC N-terminal domain Lectin_N PF03954.14 ORF104464 - 0.23 11.2 4.6 5.7 6.7 1.6 2.7 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain IL2 PF00715.17 ORF104464 - 0.48 10.3 4.1 1.1 9.2 3.3 1.9 1 1 0 1 1 1 0 Interleukin 2 DUF4407 PF14362.6 ORF104464 - 0.69 9.2 14.7 0.091 12.1 8.2 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4407) PIG-L PF02585.17 ORF104464 - 1.6 9.4 8.3 63 4.2 8.3 2.8 1 1 0 1 1 1 0 GlcNAc-PI de-N-acetylase MbeD_MobD PF04899.12 ORF104464 - 2.2 8.4 9.4 0.23 11.6 3.1 2.6 3 0 0 3 3 3 0 MbeD/MobD like DUF1003 PF06210.11 ORF104464 - 5.2 7.2 5.9 4 7.6 0.3 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1003) Pkinase PF00069.25 ORF102414 - 6.9e-64 215.7 0.1 8.3e-64 215.5 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF102414 - 3.6e-22 78.9 0.0 4.8e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF102414 - 7.3e-08 32.6 0.0 2.2e-05 24.5 0.2 2.6 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 ORF102414 - 0.0043 16.4 0.0 0.0068 15.8 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF102414 - 0.0051 15.6 0.1 0.015 14.1 0.0 1.7 2 0 0 2 2 2 1 Fungal protein kinase Choline_kinase PF01633.20 ORF102414 - 0.07 12.7 0.3 0.13 11.9 0.3 1.4 1 0 0 1 1 1 0 Choline/ethanolamine kinase Aa_trans PF01490.18 ORF102071 - 2.4e-34 118.8 12.0 3.8e-34 118.1 12.0 1.3 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF1645 PF07816.11 ORF101953 - 0.018 15.6 0.1 0.028 15.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1645) Abhydrolase_3 PF07859.13 ORF100714 - 3.6e-34 118.5 0.0 4.8e-34 118.1 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF100714 - 2.1e-10 40.0 0.1 3.7e-10 39.2 0.1 1.4 1 0 0 1 1 1 1 Steryl acetyl hydrolase COesterase PF00135.28 ORF100714 - 0.032 13.1 0.0 0.06 12.2 0.0 1.4 1 0 0 1 1 1 0 Carboxylesterase family MG2 PF01835.19 NODE_15233_length_1139_cov_135.451993_g243_i2reverse_frame_1 - 0.00012 22.5 0.1 0.001 19.5 0.0 2.4 2 1 0 2 2 2 1 MG2 domain Arrestin_C PF02752.22 NODE_15233_length_1139_cov_135.451993_g243_i2reverse_frame_1 - 0.017 15.6 1.5 0.025 15.1 0.3 1.9 2 0 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain Secretin_N PF03958.17 NODE_15194_length_1141_cov_4.583183_g11467_i0reverse_frame_3 - 0.0055 17.1 0.0 0.011 16.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial type II/III secretion system short domain T2SSC PF11356.8 NODE_15194_length_1141_cov_4.583183_g11467_i0reverse_frame_2 - 1.4e-07 31.5 0.0 2e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Type II secretion system protein C DUF5617 PF18493.1 NODE_15194_length_1141_cov_4.583183_g11467_i0forward_frame_3 - 0.12 12.4 0.3 0.27 11.3 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) FAD_binding_3 PF01494.19 ORF95027 - 1.1e-07 31.4 0.0 1.6e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF95027 - 2e-06 27.2 0.0 3.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF95027 - 0.00026 20.2 0.9 0.047 12.8 0.6 2.7 3 0 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 ORF95027 - 0.0038 17.4 0.1 0.03 14.6 0.3 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 ORF95027 - 0.023 13.4 0.5 0.054 12.2 0.5 1.6 1 0 0 1 1 1 0 HI0933-like protein Thi4 PF01946.17 ORF95027 - 0.024 13.9 0.1 0.051 12.8 0.1 1.4 1 0 0 1 1 1 0 Thi4 family Pyr_redox PF00070.27 ORF95027 - 0.064 13.8 0.0 5 7.7 0.1 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF95027 - 0.18 11.1 0.1 0.79 8.9 0.1 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase LCAT PF02450.15 ORF93585 - 2.9e-33 115.6 0.0 1.3e-32 113.5 0.0 1.7 1 1 1 2 2 2 1 Lecithin:cholesterol acyltransferase Ser_hydrolase PF06821.13 ORF93585 - 0.012 15.5 0.0 0.025 14.4 0.0 1.5 1 0 0 1 1 1 0 Serine hydrolase OmpH PF03938.14 ORF93078 - 0.0009 19.6 16.5 0.0009 19.6 16.5 2.1 2 0 0 2 2 2 1 Outer membrane protein (OmpH-like) Exonuc_VII_L PF02601.15 ORF93078 - 0.0064 16.1 5.2 0.0064 16.1 5.2 1.7 2 0 0 2 2 2 1 Exonuclease VII, large subunit Baculo_PEP_C PF04513.12 ORF93078 - 0.0068 16.5 2.1 0.074 13.1 0.0 2.3 1 1 1 2 2 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus Fzo_mitofusin PF04799.13 ORF93078 - 0.047 13.3 0.3 0.047 13.3 0.3 2.3 2 0 0 2 2 2 0 fzo-like conserved region Tweety PF04906.13 ORF93078 - 0.075 11.7 0.6 0.12 11.1 0.6 1.2 1 0 0 1 1 1 0 Tweety USP8_interact PF08941.10 ORF93078 - 0.084 12.7 3.3 0.17 11.7 3.3 1.5 1 0 0 1 1 1 0 USP8 interacting Antimicrobial12 PF08107.11 ORF93078 - 0.35 10.6 1.8 7.9 6.3 0.9 2.3 2 0 0 2 2 2 0 Pleurocidin family DUF737 PF05300.11 ORF93078 - 0.38 11.1 17.8 0.057 13.8 13.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF737) ALMT PF11744.8 ORF93078 - 0.44 9.3 6.4 0.69 8.7 6.4 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter Apolipoprotein PF01442.18 ORF93078 - 0.96 9.3 10.9 5.3 6.9 10.9 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF948 PF06103.11 ORF93078 - 1.5 9.1 7.5 2.3 8.5 0.1 2.9 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) I_LWEQ PF01608.17 ORF93078 - 1.7 8.9 8.8 3.7 7.8 8.8 1.6 1 0 0 1 1 1 0 I/LWEQ domain Syntaxin-6_N PF09177.11 ORF93078 - 3.3 8.3 13.0 6.6 7.4 6.3 3.0 2 1 1 3 3 2 0 Syntaxin 6, N-terminal LMBR1 PF04791.16 ORF93078 - 3.5 6.4 10.5 5.9 5.7 7.1 2.2 2 0 0 2 2 2 0 LMBR1-like membrane protein DUF1664 PF07889.12 ORF93078 - 3.6 7.6 10.9 2.1e+02 1.9 10.8 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF1451 PF07295.11 ORF93078 - 8.5 6.4 11.6 1.5 8.9 7.5 1.8 2 0 0 2 2 2 0 Zinc-ribbon containing domain CRA PF06589.11 ORF87856 - 0.0085 16.2 6.8 0.023 14.8 6.8 1.7 1 0 0 1 1 1 1 Circumsporozoite-related antigen (CRA) TMEM51 PF15345.6 ORF87856 - 0.017 15.0 0.2 0.017 15.0 0.2 1.9 2 0 0 2 2 2 0 Transmembrane protein 51 PA26 PF04636.13 ORF87856 - 0.04 12.8 0.1 0.053 12.5 0.1 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) FAM176 PF14851.6 ORF87856 - 0.054 13.1 0.4 0.054 13.1 0.4 1.6 2 0 0 2 2 2 0 FAM176 family CPSF100_C PF13299.6 ORF87856 - 0.066 13.4 1.5 0.11 12.7 1.5 1.3 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal MMM1 PF10296.9 ORF87856 - 0.089 11.8 0.9 0.12 11.4 0.2 1.5 2 0 0 2 2 2 0 Maintenance of mitochondrial morphology protein 1 NPR3 PF03666.13 ORF87856 - 0.27 10.0 2.8 0.35 9.6 2.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 OAD_gamma PF04277.13 ORF87856 - 0.31 11.7 0.1 0.31 11.7 0.1 3.2 3 0 0 3 3 2 0 Oxaloacetate decarboxylase, gamma chain Serinc PF03348.15 ORF87856 - 0.5 9.2 6.3 4.5 6.1 0.0 2.1 2 0 0 2 2 2 0 Serine incorporator (Serinc) Ac76 PF05814.11 ORF87856 - 0.51 10.4 0.0 0.51 10.4 0.0 2.4 2 0 0 2 2 1 0 Orf76 (Ac76) SHR3_chaperone PF08229.11 ORF87856 - 2.2 7.2 9.7 43 3.0 9.7 2.2 1 1 0 1 1 1 0 ER membrane protein SH3 OST3_OST6 PF04756.13 ORF87856 - 6.3 6.1 8.2 12 5.1 8.2 1.4 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Tubulin PF00091.25 ORF86820 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF86820 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF86820 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF86820 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like TPR_MLP1_2 PF07926.12 ORF86205 - 0.002 18.2 80.0 0.0081 16.2 11.8 5.3 1 1 4 5 5 5 5 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 ORF86205 - 0.42 9.5 86.0 1.2 7.9 27.2 4.0 1 1 3 4 4 4 0 Spc7 kinetochore protein DIE2_ALG10 PF04922.12 ORF84608 - 1.1e-74 252.1 10.7 1.6e-74 251.6 10.7 1.2 1 0 0 1 1 1 1 DIE2/ALG10 family EF-hand_7 PF13499.6 ORF80509 - 6e-06 26.6 0.0 0.0051 17.2 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF80509 - 0.0017 18.1 0.0 27 5.0 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF80509 - 0.21 11.2 0.0 3.7 7.3 0.0 2.8 3 0 0 3 3 3 0 EF hand CCD48 PF15799.5 ORF80509 - 0.22 9.8 2.1 0.43 8.8 0.0 2.2 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 48 Ketoacyl-synt_C PF02801.22 ORF75979 - 4.4e-29 100.9 0.0 6.1e-29 100.4 0.0 1.2 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 ORF75979 - 0.0045 17.4 0.1 0.0075 16.7 0.1 1.4 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension AMPK1_CBM PF16561.5 ORF75979 - 0.045 14.0 0.0 0.37 11.0 0.0 2.1 1 1 1 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase Porin_5 PF16930.5 ORF75979 - 0.079 11.4 0.1 0.12 10.9 0.1 1.2 1 0 0 1 1 1 0 Putative porin SesA PF17107.5 ORF75658 - 0.63 10.2 9.2 3 8.0 0.6 3.3 2 1 2 4 4 4 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Cauli_DNA-bind PF03310.13 ORF75658 - 0.74 9.9 3.5 0.45 10.6 0.1 2.3 3 0 0 3 3 3 0 Caulimovirus DNA-binding protein Spc7 PF08317.11 ORF75080 - 0.0063 15.4 18.3 0.0063 15.4 18.3 3.0 1 1 2 3 3 3 1 Spc7 kinetochore protein HMG_box PF00505.19 ORF75080 - 0.0091 16.4 0.1 0.072 13.5 0.1 2.6 1 0 0 1 1 1 1 HMG (high mobility group) box BST2 PF16716.5 ORF75080 - 0.025 15.2 10.1 0.025 15.2 10.1 5.1 2 2 3 6 6 6 0 Bone marrow stromal antigen 2 Hormone_1 PF00103.20 ORF75080 - 0.22 11.2 5.1 0.16 11.7 0.9 2.5 2 0 0 2 2 2 0 Somatotropin hormone family CbiX PF01903.17 ORF75080 - 0.45 10.9 5.6 2.8 8.3 0.0 3.4 3 0 0 3 3 3 0 CbiX Prominin PF05478.11 ORF75080 - 0.46 8.4 13.2 0.031 12.3 0.6 2.3 2 1 0 2 2 2 0 Prominin Takusan PF04822.13 ORF75080 - 6.1 6.8 13.7 15 5.6 0.1 3.6 3 1 0 3 3 3 0 Takusan Filament PF00038.21 ORF75080 - 7 6.1 48.9 4 6.9 13.8 4.1 1 1 3 4 4 4 0 Intermediate filament protein Amino_oxidase PF01593.24 ORF72074 - 6e-18 65.4 0.4 1.1e-17 64.5 0.1 1.5 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Beta-lactamase PF00144.24 ORF71992 - 2.6e-48 165.0 0.0 5e-48 164.0 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase Tubulin PF00091.25 ORF71262 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF71262 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF71262 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF71262 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like MFS_1 PF07690.16 ORF70138 - 8.6e-32 110.4 41.2 3.9e-23 81.9 25.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF70138 - 9.1e-10 38.0 18.9 6.3e-09 35.2 3.4 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 ORF70138 - 0.076 11.4 20.5 0.02 13.3 13.1 2.0 1 1 1 2 2 2 0 Transmembrane secretion effector LacY_symp PF01306.19 ORF70138 - 0.69 8.6 12.2 2.2 7.0 3.7 2.2 1 1 1 2 2 2 0 LacY proton/sugar symporter SpoVAB PF13782.6 ORF70138 - 0.97 9.8 0.0 0.97 9.8 0.0 3.6 4 1 0 4 4 4 0 Stage V sporulation protein AB PseudoU_synth_2 PF00849.22 ORF69199 - 1.8e-16 60.7 0.0 5.4e-16 59.1 0.0 1.8 1 1 0 1 1 1 1 RNA pseudouridylate synthase PPR_2 PF13041.6 ORF69199 - 0.0014 18.8 0.0 0.0032 17.6 0.0 1.6 1 0 0 1 1 1 1 PPR repeat family EamA PF00892.20 ORF63606 - 8.7e-08 32.4 35.7 0.00017 21.8 18.7 2.2 2 0 0 2 2 2 2 EamA-like transporter family PPR_2 PF13041.6 ORF63457 - 5.1e-21 74.6 0.9 1.1e-08 35.1 0.0 7.1 4 2 4 8 8 8 3 PPR repeat family PPR_3 PF13812.6 ORF63457 - 5.5e-14 52.0 0.0 0.00015 21.8 0.0 6.3 7 1 1 8 8 8 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF63457 - 1.2e-10 40.9 3.6 0.012 15.8 0.0 6.9 6 1 0 6 6 6 2 PPR repeat DUF2711 PF10924.8 ORF63457 - 0.029 14.0 0.2 0.45 10.1 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2711) Clathrin PF00637.20 ORF63457 - 0.042 13.7 0.0 14 5.5 0.0 4.0 4 1 1 5 5 5 0 Region in Clathrin and VPS CaATP_NAI PF12515.8 ORF63457 - 0.14 11.8 1.6 6.6 6.4 0.0 3.7 4 0 0 4 4 4 0 Ca2+-ATPase N terminal autoinhibitory domain Peptidase_C48 PF02902.19 ORF6312 - 9.1e-42 143.3 0.2 1.1e-41 143.0 0.2 1.1 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain TrkH PF02386.16 ORF63104 - 8.2e-65 219.2 7.7 1.1e-64 218.8 7.7 1.1 1 0 0 1 1 1 1 Cation transport protein Peptidase_U4 PF03419.13 ORF63104 - 0.032 13.5 3.6 0.24 10.6 0.1 2.2 2 0 0 2 2 2 0 Sporulation factor SpoIIGA PIRT PF15099.6 ORF63104 - 0.43 10.2 1.9 1.1 8.8 1.9 1.6 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family Acyl_transf_3 PF01757.22 ORF57196 - 2.9e-13 49.6 31.4 3.5e-13 49.3 31.4 1.1 1 0 0 1 1 1 1 Acyltransferase family SpoV PF08183.11 ORF56439 - 0.12 12.4 0.5 0.32 11.0 0.5 1.7 1 0 0 1 1 1 0 Stage V sporulation protein family Sugar_tr PF00083.24 ORF56006 - 3.4e-29 102.0 13.7 9.6e-29 100.5 13.7 1.6 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF56006 - 3.1e-10 39.5 1.1 0.00013 21.0 0.0 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Tubulin PF00091.25 ORF54907 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF54907 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF54907 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF54907 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Tubulin PF00091.25 ORF53502 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF53502 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF53502 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF53502 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Tubulin PF00091.25 ORF51871 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF51871 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF51871 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF51871 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like AAA PF00004.29 ORF50923 - 3.9e-43 147.0 0.0 8.2e-43 146.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF50923 - 6.6e-12 45.0 0.1 1.4e-11 44.0 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 ORF50923 - 4.4e-10 39.4 0.1 9.9e-10 38.2 0.1 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_2 PF07724.14 ORF50923 - 5.7e-07 29.8 0.4 1.6e-06 28.4 0.0 1.9 2 1 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 ORF50923 - 2.9e-06 27.8 0.8 0.00017 22.0 0.0 3.1 2 1 1 4 4 3 1 AAA ATPase domain AAA_5 PF07728.14 ORF50923 - 3e-06 27.3 0.3 1.5e-05 25.0 0.0 2.3 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF50923 - 6e-05 22.8 0.0 0.00016 21.4 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF50923 - 6e-05 23.3 0.5 0.015 15.6 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF50923 - 0.00088 19.4 1.2 0.0016 18.6 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF50923 - 0.0012 19.4 0.1 0.0069 16.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 ORF50923 - 0.0013 18.1 0.3 0.0032 16.7 0.0 1.8 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_13 PF13166.6 ORF50923 - 0.0024 16.6 1.1 0.16 10.6 1.9 2.1 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF50923 - 0.0033 17.2 0.0 0.007 16.1 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein ATPase PF06745.13 ORF50923 - 0.0037 16.6 1.3 0.018 14.4 0.0 2.5 3 0 0 3 3 3 1 KaiC Mg_chelatase PF01078.21 ORF50923 - 0.0051 16.2 0.2 0.018 14.4 0.1 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI PhoH PF02562.16 ORF50923 - 0.0068 15.9 0.1 0.15 11.5 0.0 2.4 2 0 0 2 2 2 1 PhoH-like protein DUF2072 PF09845.9 ORF50923 - 0.0082 16.4 1.6 0.015 15.6 1.6 1.5 1 0 0 1 1 1 1 Zn-ribbon containing protein AAA_28 PF13521.6 ORF50923 - 0.012 15.8 0.7 0.03 14.6 0.0 2.0 2 1 1 3 3 1 0 AAA domain AAA_3 PF07726.11 ORF50923 - 0.013 15.3 0.0 0.034 14.0 0.0 1.8 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 ORF50923 - 0.014 15.1 0.1 0.15 11.8 0.0 2.4 1 1 0 2 2 2 0 Sigma-54 interaction domain RNA_helicase PF00910.22 ORF50923 - 0.014 15.7 0.0 0.027 14.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_24 PF13479.6 ORF50923 - 0.02 14.6 0.0 0.05 13.3 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 ORF50923 - 0.025 14.4 0.7 0.39 10.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 ORF50923 - 0.03 13.9 0.0 0.053 13.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 ORF50923 - 0.034 14.1 0.0 0.072 13.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 ORF50923 - 0.042 13.8 0.0 0.69 9.8 0.0 2.2 1 1 1 2 2 2 0 NACHT domain Parvo_NS1 PF01057.17 ORF50923 - 0.052 12.6 0.6 0.084 11.9 0.0 1.5 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 ORF50923 - 0.055 13.0 0.4 0.17 11.5 0.0 1.9 2 0 0 2 2 1 0 AAA domain DUF815 PF05673.13 ORF50923 - 0.057 12.6 0.0 0.13 11.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_14 PF13173.6 ORF50923 - 0.068 13.2 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain Spc7 PF08317.11 ORF50923 - 0.088 11.7 2.2 0.21 10.5 2.2 1.6 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4763 PF15960.5 ORF50923 - 0.094 12.0 2.4 0.22 10.8 2.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) DivIC PF04977.15 ORF50923 - 0.13 12.1 5.0 0.095 12.5 3.0 1.8 2 0 0 2 2 1 0 Septum formation initiator DUF4140 PF13600.6 ORF50923 - 0.49 10.9 2.5 1.4 9.4 2.5 1.7 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) APG6_N PF17675.1 ORF50923 - 0.51 10.9 5.0 1.3 9.6 5.0 1.6 1 0 0 1 1 1 0 Apg6 coiled-coil region AAA_23 PF13476.6 ORF50923 - 0.81 10.1 3.1 73 3.8 3.2 2.5 2 0 0 2 2 2 0 AAA domain DUF3450 PF11932.8 ORF50923 - 1.6 8.0 5.2 1.1 8.4 1.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF4436 PF14494.6 ORF50120 - 1.2 8.4 3.5 2.2 7.5 3.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4436) Fe-ADH PF00465.19 ORF4907 - 7.2e-64 215.9 6.4 8.2e-64 215.7 6.4 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 ORF4907 - 2.4e-30 106.0 0.1 3.2e-30 105.6 0.1 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 ORF4907 - 0.036 13.2 4.7 1.3 8.2 4.6 2.7 1 1 0 1 1 1 0 3-dehydroquinate synthase DUF4419 PF14388.6 ORF47044 - 8.9e-95 317.6 0.0 1e-94 317.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) Tubulin PF00091.25 ORF46824 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF46824 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF46824 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF46824 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like DUF4419 PF14388.6 ORF45803 - 8.9e-95 317.6 0.0 1e-94 317.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) DUF4419 PF14388.6 ORF3479 - 8.9e-95 317.6 0.0 1e-94 317.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) COPIIcoated_ERV PF07970.12 ORF34011 - 0.044 13.6 0.2 0.044 13.6 0.2 2.1 3 0 0 3 3 3 0 Endoplasmic reticulum vesicle transporter Indigoidine_A PF04227.12 ORF34011 - 0.061 12.7 0.4 0.15 11.4 0.4 1.6 1 0 0 1 1 1 0 Indigoidine synthase A like protein Hema_stalk PF08720.10 ORF34011 - 0.24 11.1 4.1 0.097 12.4 0.3 2.2 2 1 0 2 2 2 0 Influenza C hemagglutinin stalk Lant_dehydr_C PF14028.6 ORF34011 - 0.69 9.4 7.1 0.21 11.1 2.8 2.1 2 0 0 2 2 2 0 Lantibiotic biosynthesis dehydratase C-term Peptidase_C50 PF03568.17 ORF34011 - 0.78 8.8 30.1 0.0055 15.9 14.7 2.2 1 1 1 2 2 2 0 Peptidase family C50 SPC25 PF06703.11 ORF33166 - 0.26 11.1 1.2 0.9 9.3 0.0 2.2 2 0 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF4419 PF14388.6 ORF33115 - 8.9e-95 317.6 0.0 1e-94 317.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) EF-hand_6 PF13405.6 ORF33103 - 2.8e-13 48.6 0.9 6.2e-06 25.7 0.0 3.9 4 0 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF33103 - 3.8e-12 44.8 1.2 3.7e-07 29.2 0.2 4.0 4 0 0 4 4 4 2 EF hand EF-hand_7 PF13499.6 ORF33103 - 3.8e-12 46.5 0.2 9.8e-08 32.3 0.2 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF33103 - 4.3e-10 39.3 0.1 2.9e-07 30.2 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF33103 - 1.7e-06 27.2 0.2 3.1e-05 23.3 0.0 2.9 3 0 0 3 3 3 1 EF hand Pkinase PF00069.25 ORF33103 - 2.3e-06 27.2 0.0 3.6e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain DUF2838 PF10998.8 ORF32187 - 6.6e-13 48.9 13.3 6.6e-13 48.9 13.3 3.1 2 1 0 2 2 2 1 Protein of unknown function (DUF2838) DUF4763 PF15960.5 ORF30610 - 0.038 13.3 1.4 0.058 12.7 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) DUF4419 PF14388.6 ORF26320 - 8.9e-95 317.6 0.0 1e-94 317.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) OmpH PF03938.14 ORF25984 - 0.0009 19.6 16.5 0.0009 19.6 16.5 2.1 2 0 0 2 2 2 1 Outer membrane protein (OmpH-like) Exonuc_VII_L PF02601.15 ORF25984 - 0.0064 16.1 5.2 0.0064 16.1 5.2 1.7 2 0 0 2 2 2 1 Exonuclease VII, large subunit Baculo_PEP_C PF04513.12 ORF25984 - 0.0068 16.5 2.1 0.074 13.1 0.0 2.3 1 1 1 2 2 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus Fzo_mitofusin PF04799.13 ORF25984 - 0.047 13.3 0.3 0.047 13.3 0.3 2.3 2 0 0 2 2 2 0 fzo-like conserved region Tweety PF04906.13 ORF25984 - 0.075 11.7 0.6 0.12 11.1 0.6 1.2 1 0 0 1 1 1 0 Tweety USP8_interact PF08941.10 ORF25984 - 0.084 12.7 3.3 0.17 11.7 3.3 1.5 1 0 0 1 1 1 0 USP8 interacting Antimicrobial12 PF08107.11 ORF25984 - 0.35 10.6 1.8 7.9 6.3 0.9 2.3 2 0 0 2 2 2 0 Pleurocidin family DUF737 PF05300.11 ORF25984 - 0.38 11.1 17.8 0.057 13.8 13.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF737) ALMT PF11744.8 ORF25984 - 0.44 9.3 6.4 0.69 8.7 6.4 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter Apolipoprotein PF01442.18 ORF25984 - 0.96 9.3 10.9 5.3 6.9 10.9 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF948 PF06103.11 ORF25984 - 1.5 9.1 7.5 2.3 8.5 0.1 2.9 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) I_LWEQ PF01608.17 ORF25984 - 1.7 8.9 8.8 3.7 7.8 8.8 1.6 1 0 0 1 1 1 0 I/LWEQ domain Syntaxin-6_N PF09177.11 ORF25984 - 3.3 8.3 13.0 6.6 7.4 6.3 3.0 2 1 1 3 3 2 0 Syntaxin 6, N-terminal LMBR1 PF04791.16 ORF25984 - 3.5 6.4 10.5 5.9 5.7 7.1 2.2 2 0 0 2 2 2 0 LMBR1-like membrane protein DUF1664 PF07889.12 ORF25984 - 3.6 7.6 10.9 2.1e+02 1.9 10.8 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF1451 PF07295.11 ORF25984 - 8.5 6.4 11.6 1.5 8.9 7.5 1.8 2 0 0 2 2 2 0 Zinc-ribbon containing domain Ketoacyl-synt_C PF02801.22 ORF20660 - 4.4e-29 100.9 0.0 6.1e-29 100.4 0.0 1.2 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 ORF20660 - 0.0045 17.4 0.1 0.0075 16.7 0.1 1.4 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension AMPK1_CBM PF16561.5 ORF20660 - 0.045 14.0 0.0 0.37 11.0 0.0 2.1 1 1 1 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase Porin_5 PF16930.5 ORF20660 - 0.079 11.4 0.1 0.12 10.9 0.1 1.2 1 0 0 1 1 1 0 Putative porin Tubulin PF00091.25 ORF2052 - 7.8e-50 169.8 0.0 2.2e-49 168.4 0.0 1.7 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF2052 - 3.7e-42 143.5 0.2 5.5e-42 142.9 0.2 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_2 PF13809.6 ORF2052 - 0.0022 17.3 0.1 0.0067 15.7 0.0 1.8 2 0 0 2 2 2 1 Tubulin like Tubulin_3 PF14881.6 ORF2052 - 0.0045 16.7 0.0 0.0079 15.9 0.0 1.4 1 0 0 1 1 1 1 Tubulin domain DUF4419 PF14388.6 ORF18526 - 8.9e-95 317.6 0.0 1e-94 317.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) DUF1664 PF07889.12 ORF13806 - 0.28 11.2 2.9 15 5.6 1.5 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Fez1 PF06818.15 ORF13806 - 0.32 11.4 6.8 1.4 9.3 6.8 2.0 1 1 0 1 1 1 0 Fez1 MbeD_MobD PF04899.12 ORF13806 - 0.34 11.0 5.0 4.6 7.4 0.4 2.6 2 0 0 2 2 2 0 MbeD/MobD like DUF745 PF05335.13 ORF13806 - 5.1 6.8 7.9 4.4 7.0 3.9 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Phos_pyr_kin PF08543.12 ORF12616 - 1.7e-18 66.9 0.0 2.8e-18 66.2 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 ORF12616 - 1.7e-07 30.8 0.1 6.6e-07 28.9 0.1 1.8 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 ORF12616 - 0.019 14.4 0.1 0.075 12.5 0.0 1.8 2 0 0 2 2 2 0 Carbohydrate kinase Las1 PF04031.13 ORF12616 - 0.2 11.7 0.0 0.31 11.2 0.0 1.4 1 0 0 1 1 1 0 Las1-like Rad50_zn_hook PF04423.14 ORF12616 - 0.31 10.9 0.6 6.5 6.7 0.1 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif NYN PF01936.18 ORF105041 - 0.076 13.5 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 NYN domain DUF4192 PF13830.6 ORF105041 - 0.11 12.6 5.1 0.34 10.9 3.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4192) CRA PF06589.11 ORF102027 - 0.0085 16.2 6.8 0.023 14.8 6.8 1.7 1 0 0 1 1 1 1 Circumsporozoite-related antigen (CRA) TMEM51 PF15345.6 ORF102027 - 0.017 15.0 0.2 0.017 15.0 0.2 1.9 2 0 0 2 2 2 0 Transmembrane protein 51 PA26 PF04636.13 ORF102027 - 0.04 12.8 0.1 0.053 12.5 0.1 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) FAM176 PF14851.6 ORF102027 - 0.054 13.1 0.4 0.054 13.1 0.4 1.6 2 0 0 2 2 2 0 FAM176 family CPSF100_C PF13299.6 ORF102027 - 0.066 13.4 1.5 0.11 12.7 1.5 1.3 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal MMM1 PF10296.9 ORF102027 - 0.089 11.8 0.9 0.12 11.4 0.2 1.5 2 0 0 2 2 2 0 Maintenance of mitochondrial morphology protein 1 NPR3 PF03666.13 ORF102027 - 0.27 10.0 2.8 0.35 9.6 2.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 OAD_gamma PF04277.13 ORF102027 - 0.31 11.7 0.1 0.31 11.7 0.1 3.2 3 0 0 3 3 2 0 Oxaloacetate decarboxylase, gamma chain Serinc PF03348.15 ORF102027 - 0.5 9.2 6.3 4.5 6.1 0.0 2.1 2 0 0 2 2 2 0 Serine incorporator (Serinc) Ac76 PF05814.11 ORF102027 - 0.51 10.4 0.0 0.51 10.4 0.0 2.4 2 0 0 2 2 1 0 Orf76 (Ac76) SHR3_chaperone PF08229.11 ORF102027 - 2.2 7.2 9.7 43 3.0 9.7 2.2 1 1 0 1 1 1 0 ER membrane protein SH3 OST3_OST6 PF04756.13 ORF102027 - 6.3 6.1 8.2 12 5.1 8.2 1.4 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family zf-C2HC_2 PF13913.6 ORF100676 - 1.1e-18 66.6 6.0 1.8e-09 37.3 0.8 2.3 2 0 0 2 2 2 2 zinc-finger of a C2HC-type zf-C2H2 PF00096.26 ORF100676 - 0.0001 22.5 9.8 0.0085 16.5 0.1 3.6 2 2 2 4 4 4 2 Zinc finger, C2H2 type zf-RING_7 PF02591.15 ORF100676 - 0.0002 21.4 0.9 0.16 12.2 0.0 2.4 2 0 0 2 2 2 2 C4-type zinc ribbon domain zf-C2H2_4 PF13894.6 ORF100676 - 0.00032 21.3 7.7 0.31 12.0 0.3 3.3 2 2 2 4 4 3 2 C2H2-type zinc finger zf-ACC PF17848.1 ORF100676 - 0.00042 20.3 2.4 0.12 12.5 0.1 2.3 2 0 0 2 2 2 2 Acetyl-coA carboxylase zinc finger domain zf-ribbon_3 PF13248.6 ORF100676 - 0.0046 16.3 2.4 0.075 12.5 0.1 2.5 2 0 0 2 2 2 1 zinc-ribbon domain zf_UBZ PF18439.1 ORF100676 - 0.005 16.4 0.8 0.98 9.1 0.0 2.7 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 ORF100676 - 0.0053 16.8 0.5 3.2 7.9 0.1 2.6 2 0 0 2 2 2 1 Zinc ribbon domain TRAF6_Z2 PF18048.1 ORF100676 - 0.0057 16.7 1.9 0.78 9.9 0.0 2.5 2 0 0 2 2 2 1 TNF receptor-associated factor 6 zinc finger 2 zinc_ribbon_4 PF13717.6 ORF100676 - 0.01 15.8 0.3 0.57 10.2 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain zf-Di19 PF05605.12 ORF100676 - 0.013 15.8 1.0 4.7 7.6 0.0 2.3 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding UPF0547 PF10571.9 ORF100676 - 0.015 15.4 1.5 0.93 9.6 0.1 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_5 PF13719.6 ORF100676 - 0.016 14.9 3.3 1.1 9.0 0.4 2.5 2 0 0 2 2 2 0 zinc-ribbon domain ADK_lid PF05191.14 ORF100676 - 0.019 14.9 5.4 0.87 9.6 0.2 3.3 3 1 1 4 4 3 0 Adenylate kinase, active site lid zinc_ribbon_9 PF14369.6 ORF100676 - 0.035 14.3 1.9 1.8 8.9 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon FYVE PF01363.21 ORF100676 - 0.039 14.1 0.8 3.3 7.9 0.0 2.3 2 0 0 2 2 2 0 FYVE zinc finger zf-C2H2_11 PF16622.5 ORF100676 - 0.04 13.7 0.2 8 6.3 0.1 2.5 2 0 0 2 2 2 0 zinc-finger C2H2-type GcpE PF04551.14 ORF100676 - 0.051 12.7 0.0 7.9 5.4 0.0 2.2 2 0 0 2 2 2 0 GcpE protein Rad50_zn_hook PF04423.14 ORF100676 - 0.076 12.9 5.3 0.76 9.7 0.1 3.0 3 0 0 3 3 2 0 Rad50 zinc hook motif zf-FPG_IleRS PF06827.14 ORF100676 - 0.089 12.7 3.3 2.2 8.2 0.3 2.5 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Sgf11 PF08209.11 ORF100676 - 0.11 12.1 0.6 5.8 6.6 0.1 2.4 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Prok-RING_1 PF14446.6 ORF100676 - 0.15 12.0 2.9 1.7 8.7 0.1 2.5 2 1 0 2 2 2 0 Prokaryotic RING finger family 1 Zn_ribbon_recom PF13408.6 ORF100676 - 0.15 12.6 1.6 5.2 7.7 0.2 2.4 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF100676 - 0.19 11.7 1.2 10 6.2 0.1 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-H2C2_2 PF13465.6 ORF100676 - 0.23 11.9 5.9 4.6 7.8 0.1 3.3 4 0 0 4 4 2 0 Zinc-finger double domain zinc_ribbon_2 PF13240.6 ORF100676 - 0.33 10.7 3.5 2.7 7.8 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 ORF100676 - 0.49 9.9 1.6 9.5 5.8 0.2 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding zinc-ribbons_6 PF07191.12 ORF100676 - 0.75 9.8 3.1 15 5.7 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbons zf-LYAR PF08790.11 ORF100676 - 1 9.3 5.5 2.3 8.2 0.0 3.2 4 0 0 4 4 4 0 LYAR-type C2HC zinc finger Zn_ribbon_SprT PF17283.2 ORF100676 - 1.6 8.7 5.5 17 5.4 0.8 2.5 2 0 0 2 2 2 0 SprT-like zinc ribbon domain FYDLN_acid PF09538.10 ORF100676 - 2.9 8.6 6.7 70 4.2 3.7 3.2 2 1 0 2 2 2 0 Protein of unknown function (FYDLN_acid) Zn-C2H2_12 PF18112.1 ORF100676 - 7.8 7.1 7.6 51 4.4 0.0 3.8 4 0 0 4 4 4 0 Autophagy receptor zinc finger-C2H2 domain DUF3195 PF11424.8 NODE_15313_length_1136_cov_81.232516_g11564_i0reverse_frame_1 - 0.059 13.4 0.3 0.26 11.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3195) RtcB PF01139.17 NODE_15244_length_1139_cov_3.323370_g11506_i0forward_frame_3 - 1.4e-84 284.7 0.0 2e-84 284.2 0.0 1.2 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB DUF4514 PF14986.6 NODE_15244_length_1139_cov_3.323370_g11506_i0forward_frame_3 - 0.071 13.1 0.7 0.17 11.9 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4514) ZapB PF06005.12 NODE_15226_length_1139_cov_549.077899_g11493_i0forward_frame_2 - 0.0084 16.5 1.8 0.0084 16.5 1.8 2.7 3 1 0 3 3 3 1 Cell division protein ZapB Csm1_N PF18504.1 NODE_15226_length_1139_cov_549.077899_g11493_i0forward_frame_2 - 0.16 12.4 2.1 1.5 9.2 0.6 2.7 2 0 0 2 2 2 0 Csm1 N-terminal domain DegT_DnrJ_EryC1 PF01041.17 ORF89277 - 1.1e-67 229.0 0.0 1.4e-67 228.5 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 ORF89277 - 5.4e-07 29.1 0.1 1.1e-06 28.1 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF89277 - 2.3e-06 26.8 0.0 0.00046 19.3 0.0 2.0 2 0 0 2 2 2 2 Aminotransferase class-V Beta_elim_lyase PF01212.21 ORF89277 - 2.1e-05 23.9 0.0 2.7e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 ORF89277 - 0.0053 15.3 0.0 0.0081 14.7 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme MPTase-PolyVal PF18818.1 ORF89277 - 0.15 12.1 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Metallopeptidase superfamily domain DUF4201 PF13870.6 ORF87816 - 0.0078 16.0 2.9 0.0078 16.0 2.9 3.8 3 1 2 5 5 4 1 Domain of unknown function (DUF4201) FlaC_arch PF05377.11 ORF87816 - 0.062 13.7 0.5 0.062 13.7 0.5 4.0 4 2 0 4 4 3 0 Flagella accessory protein C (FlaC) GCN5L1 PF06320.13 ORF87816 - 0.081 13.1 15.8 0.41 10.8 1.9 3.5 3 0 0 3 3 3 0 GCN5-like protein 1 (GCN5L1) Seryl_tRNA_N PF02403.22 ORF87816 - 0.16 12.2 27.0 0.05 13.8 1.6 4.2 4 0 0 4 4 4 0 Seryl-tRNA synthetase N-terminal domain DHHA1 PF02272.19 ORF87816 - 0.17 12.3 1.7 2.5 8.5 0.0 2.8 3 0 0 3 3 3 0 DHHA1 domain RPW8 PF05659.11 ORF87816 - 0.74 9.5 8.9 1.4 8.6 0.1 2.9 2 1 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 YabA PF06156.13 ORF87816 - 0.91 10.2 18.6 2.9 8.6 2.3 3.5 3 0 0 3 3 3 0 Initiation control protein YabA NPV_P10 PF05531.12 ORF87816 - 1.1 9.7 10.5 0.42 11.1 0.4 3.4 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein HALZ PF02183.18 ORF87816 - 1.3 9.3 17.6 0.18 12.1 1.4 3.2 3 1 0 3 3 2 0 Homeobox associated leucine zipper DUF4140 PF13600.6 ORF87816 - 1.3 9.5 8.4 1.6 9.3 3.1 2.8 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) ZapB PF06005.12 ORF87816 - 2.1 8.8 20.8 0.67 10.4 2.4 3.7 3 0 0 3 3 3 0 Cell division protein ZapB TMCO5 PF14992.6 ORF87816 - 2.2 7.8 23.7 0.028 14.0 2.2 3.2 2 1 1 3 3 3 0 TMCO5 family DUF948 PF06103.11 ORF87816 - 3.2 8.1 6.8 13 6.2 0.1 3.5 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Rootletin PF15035.6 ORF87816 - 3.8 7.5 22.4 0.31 11.0 2.1 3.5 3 0 0 3 3 3 0 Ciliary rootlet component, centrosome cohesion DUF4164 PF13747.6 ORF87816 - 4.6 7.6 12.2 4.7 7.6 2.9 2.9 3 0 0 3 3 2 0 Domain of unknown function (DUF4164) IFP_35_N PF07334.13 ORF87816 - 5.2 7.2 8.0 3.2 7.9 1.3 3.1 2 1 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF3450 PF11932.8 ORF87816 - 5.4 6.2 17.8 0.77 9.0 3.9 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) TPD52 PF04201.15 ORF87816 - 5.7 6.5 10.7 0.15 11.7 0.7 2.7 3 0 0 3 3 3 0 Tumour protein D52 family CENP-F_leu_zip PF10473.9 ORF87816 - 7.6 6.5 26.9 1.4 9.0 6.0 3.2 3 0 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cnn_1N PF07989.11 ORF87816 - 8.3 6.6 18.9 0.9 9.7 2.4 3.9 3 1 0 3 3 3 0 Centrosomin N-terminal motif 1 Peptidase_M23 PF01551.22 ORF87057 - 1.5e-31 108.4 1.2 1.5e-31 108.4 1.2 2.9 2 1 0 3 3 3 1 Peptidase family M23 LysM PF01476.20 ORF87057 - 5.4e-12 45.6 0.5 1.5e-11 44.1 0.2 2.0 2 0 0 2 2 2 1 LysM domain Biotin_lipoyl_2 PF13533.6 ORF87057 - 0.00068 19.4 0.0 0.23 11.3 0.0 2.9 3 0 0 3 3 3 2 Biotin-lipoyl like GCP_C_terminal PF04130.13 ORF86330 - 1.3e-76 258.1 9.6 1.5e-76 257.9 9.6 1.0 1 0 0 1 1 1 1 Gamma tubulin complex component C-terminal DUF2830 PF11125.8 ORF86330 - 0.13 12.2 1.8 17 5.5 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2830) SICA_C PF12879.7 ORF86330 - 0.91 9.5 3.8 1.1 9.3 1.3 2.1 1 1 1 2 2 2 0 SICA C-terminal inner membrane domain DUF4201 PF13870.6 ORF80224 - 0.0078 16.0 2.9 0.0078 16.0 2.9 3.8 3 1 2 5 5 4 1 Domain of unknown function (DUF4201) FlaC_arch PF05377.11 ORF80224 - 0.062 13.7 0.5 0.062 13.7 0.5 4.0 4 2 0 4 4 3 0 Flagella accessory protein C (FlaC) GCN5L1 PF06320.13 ORF80224 - 0.081 13.1 15.8 0.41 10.8 1.9 3.5 3 0 0 3 3 3 0 GCN5-like protein 1 (GCN5L1) Seryl_tRNA_N PF02403.22 ORF80224 - 0.16 12.2 27.0 0.05 13.8 1.6 4.2 4 0 0 4 4 4 0 Seryl-tRNA synthetase N-terminal domain DHHA1 PF02272.19 ORF80224 - 0.17 12.3 1.7 2.5 8.5 0.0 2.8 3 0 0 3 3 3 0 DHHA1 domain RPW8 PF05659.11 ORF80224 - 0.74 9.5 8.9 1.4 8.6 0.1 2.9 2 1 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 YabA PF06156.13 ORF80224 - 0.91 10.2 18.6 2.9 8.6 2.3 3.5 3 0 0 3 3 3 0 Initiation control protein YabA NPV_P10 PF05531.12 ORF80224 - 1.1 9.7 10.5 0.42 11.1 0.4 3.4 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein HALZ PF02183.18 ORF80224 - 1.3 9.3 17.6 0.18 12.1 1.4 3.2 3 1 0 3 3 2 0 Homeobox associated leucine zipper DUF4140 PF13600.6 ORF80224 - 1.3 9.5 8.4 1.6 9.3 3.1 2.8 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) ZapB PF06005.12 ORF80224 - 2.1 8.8 20.8 0.67 10.4 2.4 3.7 3 0 0 3 3 3 0 Cell division protein ZapB TMCO5 PF14992.6 ORF80224 - 2.2 7.8 23.7 0.028 14.0 2.2 3.2 2 1 1 3 3 3 0 TMCO5 family DUF948 PF06103.11 ORF80224 - 3.2 8.1 6.8 13 6.2 0.1 3.5 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Rootletin PF15035.6 ORF80224 - 3.8 7.5 22.4 0.31 11.0 2.1 3.5 3 0 0 3 3 3 0 Ciliary rootlet component, centrosome cohesion DUF4164 PF13747.6 ORF80224 - 4.6 7.6 12.2 4.7 7.6 2.9 2.9 3 0 0 3 3 2 0 Domain of unknown function (DUF4164) IFP_35_N PF07334.13 ORF80224 - 5.2 7.2 8.0 3.2 7.9 1.3 3.1 2 1 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF3450 PF11932.8 ORF80224 - 5.4 6.2 17.8 0.77 9.0 3.9 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) TPD52 PF04201.15 ORF80224 - 5.7 6.5 10.7 0.15 11.7 0.7 2.7 3 0 0 3 3 3 0 Tumour protein D52 family CENP-F_leu_zip PF10473.9 ORF80224 - 7.6 6.5 26.9 1.4 9.0 6.0 3.2 3 0 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cnn_1N PF07989.11 ORF80224 - 8.3 6.6 18.9 0.9 9.7 2.4 3.9 3 1 0 3 3 3 0 Centrosomin N-terminal motif 1 TTL PF03133.15 ORF75621 - 1.2e-90 303.6 3.2 1.7e-90 303.1 3.2 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF75621 - 8.3e-09 35.1 0.0 0.00026 20.3 0.0 3.1 2 1 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF75621 - 0.0004 19.7 0.1 0.036 13.3 0.0 2.6 2 1 0 2 2 2 2 Sugar-transfer associated ATP-grasp RimK PF08443.11 ORF75621 - 0.029 14.0 0.0 0.37 10.4 0.0 2.1 2 0 0 2 2 2 0 RimK-like ATP-grasp domain DMT_YdcZ PF04657.13 ORF6927 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF6927 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein DMT_YdcZ PF04657.13 ORF62168 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF62168 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein DMT_YdcZ PF04657.13 ORF6084 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF6084 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein tRNA-synt_1c PF00749.21 ORF58620 - 1.2e-51 175.5 0.2 1.9e-51 174.8 0.2 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA_synt_1c_R1 PF04558.15 ORF58620 - 1.2e-42 145.7 0.4 1.9e-42 145.0 0.4 1.3 1 0 0 1 1 1 1 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 U79_P34 PF03064.16 ORF58620 - 0.025 14.0 7.1 0.046 13.1 7.1 1.4 1 0 0 1 1 1 0 HSV U79 / HCMV P34 COX17 PF05051.13 ORF58620 - 0.035 14.5 0.1 0.098 13.0 0.1 1.7 1 0 0 1 1 1 0 Cytochrome C oxidase copper chaperone (COX17) Pkinase PF00069.25 ORF57266 - 1.4e-70 237.7 0.6 1.8e-70 237.3 0.6 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57266 - 4.3e-37 127.8 0.0 5.7e-37 127.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF57266 - 1.3e-10 41.1 0.0 7.2e-07 28.8 0.0 2.3 2 0 0 2 2 2 2 Kinase-like Pkinase_fungal PF17667.1 ORF57266 - 0.0053 15.6 0.4 0.014 14.2 0.1 1.7 2 0 0 2 2 2 1 Fungal protein kinase Dynein_C PF18199.1 ORF52877 - 1.9e-33 116.0 0.0 2.5e-33 115.6 0.0 1.1 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF52877 - 0.064 13.1 0.0 0.095 12.5 0.0 1.3 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain Polysacc_deac_2 PF04748.13 ORF52877 - 0.084 12.0 0.2 7.1 5.7 0.1 2.3 2 0 0 2 2 2 0 Divergent polysaccharide deacetylase Zip PF02535.22 ORF5252 - 2.4e-37 128.9 3.9 2.7e-37 128.7 3.9 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter DUF1129 PF06570.11 ORF5252 - 0.00048 19.7 0.2 0.00048 19.7 0.2 2.8 2 2 0 2 2 2 1 Protein of unknown function (DUF1129) DUF1043 PF06295.12 ORF5252 - 0.32 11.0 6.0 0.14 12.2 3.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) PPR_2 PF13041.6 ORF48891 - 1.1e-56 188.8 1.7 4.9e-16 58.7 0.1 6.9 2 1 5 7 7 7 7 PPR repeat family PPR_1 PF12854.7 ORF48891 - 2.1e-36 123.3 0.1 1.5e-12 47.0 0.0 7.6 8 0 0 8 8 8 4 PPR repeat PPR PF01535.20 ORF48891 - 7.7e-35 116.7 1.2 1e-06 28.6 0.0 7.2 7 0 0 7 7 7 5 PPR repeat PPR_3 PF13812.6 ORF48891 - 1.2e-33 115.0 0.5 4.1e-10 39.6 0.0 5.5 3 1 3 6 6 6 5 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF48891 - 6.6e-31 107.3 0.5 5.1e-19 68.5 0.1 2.5 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP TPR_14 PF13428.6 ORF48891 - 6.3e-07 29.7 0.0 6.2 7.9 0.0 5.3 4 1 2 6 6 5 2 Tetratricopeptide repeat ATP13 PF12921.7 ORF48891 - 1.4e-05 24.9 0.1 0.77 9.6 0.0 3.8 1 1 1 3 3 3 2 Mitochondrial ATPase expression Clathrin PF00637.20 ORF48891 - 0.00057 19.8 0.2 0.68 9.8 0.1 2.9 1 1 2 3 3 3 2 Region in Clathrin and VPS DUF4231 PF14015.6 ORF48891 - 0.016 15.6 0.1 0.028 14.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) Ku_PK_bind PF08785.11 ORF48891 - 0.02 15.0 0.4 1.7 8.8 0.1 3.0 3 0 0 3 3 3 0 Ku C terminal domain like Urocanase_N PF17391.2 ORF48891 - 0.024 14.3 0.1 7.6 6.2 0.0 2.3 2 0 0 2 2 2 0 Urocanase N-terminal domain Phage_ABA_S PF18066.1 ORF48891 - 0.059 14.1 0.4 7.8 7.3 0.1 3.2 2 2 0 3 3 3 0 Phage ABA sandwich domain RPM2 PF08579.11 ORF48891 - 0.13 12.7 0.1 36 4.8 0.0 3.0 2 1 1 3 3 3 0 Mitochondrial ribonuclease P subunit (RPM2) DUF3368 PF11848.8 ORF48891 - 0.27 11.0 0.7 2.2 8.2 0.0 2.9 5 0 0 5 5 5 0 Domain of unknown function (DUF3368) Glyco_transf_8 PF01501.20 ORF48555 - 2.5e-08 33.8 0.0 6.6e-06 25.9 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 8 Mannosyl_trans3 PF11051.8 ORF48555 - 0.29 10.5 0.0 0.43 9.9 0.0 1.2 1 0 0 1 1 1 0 Mannosyltransferase putative Metallophos PF00149.28 ORF46954 - 5.4e-15 56.4 4.6 8.4e-15 55.8 4.6 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF46954 - 0.067 14.1 0.2 0.19 12.6 0.2 1.7 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C Spc29 PF17082.5 ORF46954 - 0.15 11.9 0.0 0.29 11.0 0.0 1.5 1 0 0 1 1 1 0 Spindle Pole Component 29 Asp PF00026.23 ORF46842 - 7.3e-48 163.6 0.7 8.5e-48 163.4 0.7 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF46842 - 7.3e-11 42.6 0.3 0.0001 22.6 0.1 3.1 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 ORF46842 - 0.017 15.8 0.0 19 5.9 0.0 3.2 2 1 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 ORF46842 - 0.15 12.6 0.0 20 5.8 0.0 2.7 2 1 0 2 2 2 0 gag-polyprotein putative aspartyl protease Cys_Met_Meta_PP PF01053.20 ORF42374 - 1.4e-45 155.5 0.0 1.8e-45 155.1 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 ORF42374 - 0.0037 16.5 0.0 0.006 15.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II MHB PF16525.5 ORF42374 - 0.012 15.8 0.1 0.027 14.7 0.1 1.6 1 0 0 1 1 1 0 Haemophore, haem-binding DegT_DnrJ_EryC1 PF01041.17 ORF33472 - 1.1e-67 229.0 0.0 1.4e-67 228.5 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 ORF33472 - 5.4e-07 29.1 0.1 1.1e-06 28.1 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF33472 - 2.3e-06 26.8 0.0 0.00046 19.3 0.0 2.0 2 0 0 2 2 2 2 Aminotransferase class-V Beta_elim_lyase PF01212.21 ORF33472 - 2.1e-05 23.9 0.0 2.7e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 ORF33472 - 0.0053 15.3 0.0 0.0081 14.7 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme MPTase-PolyVal PF18818.1 ORF33472 - 0.15 12.1 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Metallopeptidase superfamily domain EF-hand_7 PF13499.6 ORF27296 - 4.7e-16 59.0 1.8 1.5e-15 57.4 1.8 1.9 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF27296 - 2.3e-13 48.6 7.6 1.1e-07 30.9 0.1 3.2 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF27296 - 2.9e-12 45.5 5.2 1.4e-06 27.8 0.2 2.9 3 0 0 3 3 3 2 EF-hand domain LRR_9 PF14580.6 ORF27296 - 4.8e-12 45.7 5.0 1.1e-11 44.5 4.1 1.9 1 1 1 2 2 2 2 Leucine-rich repeat LRR_4 PF12799.7 ORF27296 - 1.5e-11 44.3 5.9 1.3e-05 25.5 0.2 3.4 2 1 1 3 3 3 3 Leucine Rich repeats (2 copies) EF-hand_5 PF13202.6 ORF27296 - 3.5e-10 38.9 3.7 0.00022 20.5 0.0 2.8 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF27296 - 2.1e-09 37.1 1.2 0.00011 22.0 0.4 2.4 2 0 0 2 2 2 2 EF-hand domain pair Caleosin PF05042.13 ORF27296 - 0.0029 17.5 1.0 0.15 11.9 0.1 2.3 1 1 1 2 2 2 1 Caleosin related protein LRR_8 PF13855.6 ORF27296 - 0.0046 16.7 2.7 0.16 11.8 0.1 2.9 2 1 0 2 2 2 1 Leucine rich repeat EF-hand_11 PF08976.11 ORF27296 - 0.024 15.5 0.2 0.069 14.0 0.2 1.8 1 0 0 1 1 1 0 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF27296 - 0.65 10.3 8.0 3 8.2 6.4 2.7 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region RST PF12174.8 ORF27296 - 1.6 8.7 5.8 1.4 8.9 0.2 3.4 3 1 1 4 4 4 0 RCD1-SRO-TAF4 (RST) plant domain DMT_YdcZ PF04657.13 ORF26674 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF26674 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein EF-hand_1 PF00036.32 ORF25531 - 1.6e-12 46.0 7.2 1.5e-05 24.2 0.0 4.1 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF25531 - 5.8e-11 42.1 3.8 4.1e-06 26.6 1.7 4.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_7 PF13499.6 ORF25531 - 9.3e-11 42.0 9.9 7.1e-08 32.8 2.6 4.1 3 1 1 4 4 4 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF25531 - 9.7e-11 40.7 6.4 6.4e-05 22.6 0.1 4.5 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF25531 - 4e-07 29.2 9.5 0.00078 18.8 0.1 4.2 5 0 0 5 5 5 2 EF hand EF-hand_11 PF08976.11 ORF25531 - 1.1e-05 26.3 1.0 0.00048 21.0 0.0 2.8 2 0 0 2 2 2 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF25531 - 1.8 8.9 8.5 0.15 12.4 0.8 2.8 2 2 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Sec23_trunk PF04811.15 ORF17482 - 9.6e-07 28.6 1.4 1.2e-06 28.3 0.2 1.7 2 0 0 2 2 2 1 Sec23/Sec24 trunk domain ARID PF01388.21 ORF17482 - 0.0087 16.7 0.0 0.023 15.3 0.0 1.7 1 0 0 1 1 1 1 ARID/BRIGHT DNA binding domain Sec23_BS PF08033.12 ORF17482 - 0.011 16.4 0.0 0.026 15.3 0.0 1.7 1 0 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain Fibrinogen_aC PF12160.8 ORF17482 - 0.037 13.9 2.3 1 9.3 0.2 2.8 3 0 0 3 3 3 0 Fibrinogen alpha C domain Raf1_N PF18578.1 ORF17482 - 0.054 14.0 2.6 0.1 13.1 0.1 2.5 1 1 1 2 2 2 0 Rubisco accumulation factor 1 alpha helical domain PolyA_pol_RNAbd PF12627.7 ORF1570 - 1.7e-16 59.7 0.1 4.6e-16 58.3 0.1 1.8 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A HD PF01966.22 ORF1570 - 7.4e-13 48.8 0.1 5.6e-12 46.0 0.0 2.1 2 0 0 2 2 2 1 HD domain PolyA_pol PF01743.20 ORF1570 - 5.1e-11 43.1 0.0 1.1e-10 42.0 0.0 1.6 1 0 0 1 1 1 1 Poly A polymerase head domain MLANA PF14991.6 ORF12597 - 0.035 14.4 0.0 0.072 13.4 0.0 1.5 1 0 0 1 1 1 0 Protein melan-A DUF4136 PF13590.6 ORF108899 - 0.14 12.8 0.3 0.29 11.7 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4136) DMT_YdcZ PF04657.13 ORF102516 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF102516 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein Arm PF00514.23 ORF101377 - 2.2e-11 43.4 14.1 0.018 15.0 0.4 6.5 7 0 0 7 7 7 3 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 ORF101377 - 4.6e-05 23.7 23.5 7.2e-05 23.1 1.5 5.3 2 1 5 7 7 7 2 HEAT repeats V-ATPase_H_N PF03224.14 ORF101377 - 0.0012 18.2 0.0 0.08 12.2 0.1 2.7 1 1 0 2 2 2 1 V-ATPase subunit H HEAT PF02985.22 ORF101377 - 0.0015 18.6 14.0 0.19 12.1 0.0 6.0 6 0 0 6 6 6 2 HEAT repeat SEN1_N PF12726.7 ORF101377 - 0.12 10.6 0.0 0.16 10.1 0.0 1.3 1 0 0 1 1 1 0 SEN1 N terminal IFRD PF05004.13 ORF101377 - 0.25 10.4 5.1 1.3 8.0 0.3 3.1 1 1 2 3 3 3 0 Interferon-related developmental regulator (IFRD) HEAT_EZ PF13513.6 ORF101377 - 0.36 11.4 29.8 1.1 9.9 0.5 6.6 3 2 4 7 7 7 0 HEAT-like repeat Ank_5 PF13857.6 ORF101300 - 4.2e-08 33.3 0.2 0.084 13.2 0.0 4.2 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF101300 - 2.2e-06 28.1 0.0 0.0052 17.4 0.1 2.9 4 0 0 4 4 4 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF101300 - 6.1e-05 23.1 1.8 4 8.3 0.1 4.0 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF101300 - 0.0011 19.5 0.1 0.075 13.6 0.0 3.0 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF101300 - 0.01 16.2 0.8 19 5.9 0.2 4.0 4 0 0 4 4 4 0 Ankyrin repeat E2 PF08199.11 NODE_15393_length_1132_cov_462.169553_g11623_i0reverse_frame_1 - 0.11 12.4 3.9 3 7.8 1.1 2.9 2 0 0 2 2 2 0 Bacteriophage E2-like protein DUF1459 PF07312.11 NODE_15313_length_1136_cov_81.232516_g11564_i0reverse_frame_3 - 0.17 12.1 1.7 0.48 10.7 1.7 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1459) Glycolytic PF00274.19 NODE_15274_length_1137_cov_16725.841198_g10159_i10forward_frame_2 - 3.2e-159 529.3 0.0 4e-159 529.0 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Nop PF01798.18 ORF92589 - 2e-82 276.1 1.0 2e-82 276.1 1.0 1.8 2 0 0 2 2 2 1 snoRNA binding domain, fibrillarin Trypan_PARP PF05887.11 ORF92589 - 0.1 12.5 18.7 0.18 11.8 18.7 1.4 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF2201_N PF13203.6 ORF92589 - 1.1 8.8 10.7 2.1 7.9 10.7 1.5 1 0 0 1 1 1 0 Putative metallopeptidase domain RNA_polI_A34 PF08208.11 ORF92589 - 2.7 8.0 43.4 7.9 6.5 42.5 1.9 1 1 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Astacin PF01400.24 ORF91689 - 8.9e-17 61.3 2.6 1.8e-16 60.4 2.6 1.5 1 1 0 1 1 1 1 Astacin (Peptidase family M12A) Peptidase_M10 PF00413.24 ORF91689 - 0.03 14.2 2.0 0.057 13.3 2.0 1.5 1 0 0 1 1 1 0 Matrixin DUF3899 PF13038.6 ORF91689 - 0.14 12.6 0.0 0.28 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3899) DUF5325 PF17259.2 ORF91689 - 0.22 11.4 1.0 0.4 10.6 1.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5325) Ribosomal_L27A PF00828.19 ORF90869 - 2.1e-10 41.4 0.0 3.5e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF90869 - 0.13 11.6 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e PUF PF00806.19 ORF90686 - 5.1e-32 107.8 12.4 3.2e-06 26.5 0.2 6.5 6 0 0 6 6 6 6 Pumilio-family RNA binding repeat IPT PF01745.16 ORF90686 - 0.0096 15.3 1.1 0.018 14.4 0.2 1.7 1 1 1 2 2 2 1 Isopentenyl transferase Syntaxin-5_N PF11416.8 ORF90686 - 0.03 13.5 0.4 5.6 6.3 0.1 2.8 2 0 0 2 2 2 0 Syntaxin-5 N-terminal, Sly1p-binding domain Bcl-2_3 PF15286.6 ORF90686 - 0.089 13.5 0.2 0.79 10.4 0.0 2.4 2 0 0 2 2 2 0 Apoptosis regulator M11, B cell 2 leukaemia/lymphoma like MHC_I PF00129.18 ORF90686 - 0.11 12.1 0.2 1.2 8.6 0.1 2.2 1 1 1 2 2 2 0 Class I Histocompatibility antigen, domains alpha 1 and 2 MFS_1 PF07690.16 ORF90609 - 4.6e-36 124.5 65.7 7.2e-30 104.1 38.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF90609 - 1.9e-09 36.9 18.8 6.2e-09 35.2 3.4 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 ORF90609 - 0.19 10.0 20.3 0.86 7.9 20.3 1.8 1 1 0 1 1 1 0 Transmembrane secretion effector LacY_symp PF01306.19 ORF90609 - 0.91 8.2 12.4 2.7 6.7 3.7 2.2 1 1 0 2 2 2 0 LacY proton/sugar symporter SpoVAB PF13782.6 ORF90609 - 0.97 9.8 0.0 0.97 9.8 0.0 3.6 4 1 0 4 4 4 0 Stage V sporulation protein AB Ribosomal_L27A PF00828.19 ORF90362 - 2.1e-10 41.4 0.0 3.5e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF90362 - 0.13 11.6 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e Amidohydro_3 PF07969.11 ORF89413 - 2.1e-14 53.9 2.5 5.9e-12 45.8 0.4 2.6 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 ORF89413 - 2.5e-09 36.9 1.5 4.8e-08 32.7 1.5 2.4 1 1 0 1 1 1 1 Amidohydrolase family T7SS_ESX_EspC PF10824.8 ORF89413 - 0.14 12.7 1.4 1.5 9.3 0.3 2.7 3 0 0 3 3 3 0 Excreted virulence factor EspC, type VII ESX diderm Astacin PF01400.24 ORF84488 - 8.9e-17 61.3 2.6 1.8e-16 60.4 2.6 1.5 1 1 0 1 1 1 1 Astacin (Peptidase family M12A) Peptidase_M10 PF00413.24 ORF84488 - 0.03 14.2 2.0 0.057 13.3 2.0 1.5 1 0 0 1 1 1 0 Matrixin DUF3899 PF13038.6 ORF84488 - 0.14 12.6 0.0 0.28 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3899) DUF5325 PF17259.2 ORF84488 - 0.22 11.4 1.0 0.4 10.6 1.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5325) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks31.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks31.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks31.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks31.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:59:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Bunya_NS-S_2 PF03231.13 NODE_68832_length_230_cov_1.671795_g60891_i0forward_frame_2 - 0.085 11.6 0.1 0.085 11.6 0.1 1.1 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-S RPAP1_N PF08621.10 NODE_68826_length_230_cov_1.723077_g60885_i0reverse_frame_3 - 0.095 12.5 0.1 0.26 11.1 0.0 1.7 2 0 0 2 2 2 0 RPAP1-like, N-terminal Nodulin PF02451.15 NODE_68825_length_230_cov_1.728205_g60884_i0reverse_frame_3 - 0.017 14.6 0.8 0.018 14.5 0.8 1.0 1 0 0 1 1 1 0 Nodulin KIAA1430 PF13879.6 NODE_68824_length_230_cov_1.733333_g60883_i0reverse_frame_2 - 0.0012 19.6 1.0 0.0012 19.6 1.0 1.9 1 1 1 2 2 2 2 KIAA1430 homologue JTB PF05439.12 NODE_68822_length_230_cov_1.743590_g60881_i0forward_frame_3 - 0.092 12.8 0.0 0.098 12.7 0.0 1.1 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) Rhodanese_C PF12368.8 NODE_68820_length_230_cov_1.753846_g60879_i0forward_frame_3 - 0.71 10.3 6.2 4.7 7.7 6.2 2.0 1 1 0 1 1 1 0 Rhodanase C-terminal Ank_4 PF13637.6 NODE_68816_length_230_cov_1.764103_g60875_i0forward_frame_3 - 0.058 14.0 0.0 0.087 13.4 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) GSAP-16 PF14959.6 NODE_68813_length_230_cov_1.794872_g60872_i0reverse_frame_3 - 0.086 12.7 0.1 0.091 12.6 0.1 1.1 1 0 0 1 1 1 0 gamma-Secretase-activating protein C-term baeRF_family12 PF18856.1 NODE_68813_length_230_cov_1.794872_g60872_i0forward_frame_2 - 0.0062 17.1 0.1 0.0068 17.0 0.1 1.0 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 12 ComR_TPR PF18710.1 NODE_68801_length_230_cov_1.943590_g60860_i0reverse_frame_3 - 0.041 13.4 0.2 0.057 13.0 0.2 1.2 1 0 0 1 1 1 0 ComR tetratricopeptide Toxin_30 PF08117.11 NODE_68797_length_230_cov_2.000000_g60856_i0forward_frame_2 - 0.0057 16.9 2.1 0.012 15.9 2.1 1.5 1 0 0 1 1 1 1 Ptu family Amidase PF01425.21 NODE_68796_length_230_cov_2.005128_g60855_i0forward_frame_2 - 2.8e-12 46.3 0.1 3.1e-12 46.2 0.1 1.0 1 0 0 1 1 1 1 Amidase PP2C PF00481.21 NODE_68795_length_230_cov_2.010256_g60854_i0reverse_frame_2 - 1.7e-20 73.8 0.1 1.8e-20 73.7 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C AAA_lid_2 PF17863.1 NODE_68794_length_230_cov_2.020513_g60853_i0reverse_frame_3 - 0.024 14.5 0.1 0.031 14.1 0.1 1.3 1 0 0 1 1 1 0 AAA lid domain DUF2182 PF09948.9 NODE_68793_length_230_cov_2.020513_g60852_i0reverse_frame_2 - 0.15 11.9 0.1 0.15 11.9 0.1 1.0 1 0 0 1 1 1 0 Predicted metal-binding integral membrane protein (DUF2182) DUF2873 PF11395.8 NODE_68787_length_230_cov_2.087179_g60846_i0forward_frame_2 - 0.045 13.6 0.2 0.066 13.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2873) Defensin_5 PF18251.1 NODE_68785_length_230_cov_2.107692_g60844_i0reverse_frame_2 - 0.022 14.8 5.3 0.022 14.8 5.3 1.9 2 0 0 2 2 2 0 Fungal defensin Copsin Acyl-CoA_dh_N PF02771.16 NODE_68784_length_230_cov_2.128205_g60843_i0forward_frame_3 - 2.1e-09 38.0 0.0 2.3e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Bestrophin PF01062.21 NODE_68783_length_230_cov_2.164103_g60842_i0reverse_frame_3 - 0.08 12.3 1.4 0.083 12.3 1.4 1.0 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel AUDH_Cupin PF18637.1 NODE_68782_length_230_cov_2.215385_g60841_i0reverse_frame_3 - 0.019 15.0 0.7 0.02 14.9 0.7 1.1 1 0 0 1 1 1 0 Aldos-2-ulose dehydratase/isomerase (AUDH) Cupin domain CtsR_C PF17727.1 NODE_68779_length_230_cov_2.256410_g60838_i0reverse_frame_2 - 0.014 15.5 1.0 0.019 15.1 1.0 1.2 1 0 0 1 1 1 0 CtsR C-terminal dimerization domain Arg_decarbox_C PF17944.1 NODE_68779_length_230_cov_2.256410_g60838_i0reverse_frame_2 - 0.022 15.3 0.1 0.061 13.9 0.0 1.7 2 0 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension DUF1010 PF06231.11 NODE_68774_length_230_cov_2.348718_g60833_i0reverse_frame_2 - 0.068 13.7 0.1 0.078 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) DUF1700 PF08006.11 NODE_68772_length_230_cov_2.446154_g60831_i0reverse_frame_3 - 0.57 9.7 12.6 0.63 9.6 12.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Spt20 PF12090.8 NODE_68772_length_230_cov_2.446154_g60831_i0forward_frame_2 - 0.3 10.7 8.9 0.34 10.5 8.9 1.1 1 0 0 1 1 1 0 Spt20 family Stevor PF17410.2 NODE_68770_length_230_cov_2.456410_g60829_i0reverse_frame_2 - 0.65 9.5 2.1 0.8 9.2 2.1 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Omega_Repress PF07764.11 NODE_68770_length_230_cov_2.456410_g60829_i0forward_frame_2 - 0.093 13.3 0.8 3.6 8.2 0.1 2.1 1 1 1 2 2 2 0 Omega Transcriptional Repressor NADH_dehy_S2_C PF06444.11 NODE_68763_length_230_cov_2.630769_g60822_i0forward_frame_2 - 0.014 15.9 0.6 0.028 14.9 0.6 1.5 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus Collagen PF01391.18 NODE_68760_length_230_cov_2.697436_g60819_i0forward_frame_2 - 0.032 14.0 4.3 0.057 13.2 3.0 1.8 2 0 0 2 2 2 0 Collagen triple helix repeat (20 copies) P_C10 PF14974.6 NODE_68759_length_230_cov_2.707692_g60818_i0reverse_frame_3 - 0.066 13.3 0.0 0.08 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein C10 DUF3270 PF11674.8 NODE_68758_length_230_cov_2.733333_g60817_i0reverse_frame_3 - 2.4 8.4 10.4 2 8.6 9.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) DUF3905 PF13045.6 NODE_68753_length_230_cov_2.830769_g60812_i0forward_frame_3 - 0.15 12.1 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3905) LRR_9 PF14580.6 NODE_68752_length_230_cov_2.856410_g60811_i0forward_frame_2 - 3.6e-11 42.9 0.1 4.2e-11 42.7 0.1 1.1 1 0 0 1 1 1 1 Leucine-rich repeat DEAD_assoc PF08494.11 NODE_68751_length_230_cov_3.015385_g60810_i0forward_frame_3 - 1.6e-22 80.3 0.0 1.7e-22 80.1 0.0 1.0 1 0 0 1 1 1 1 DEAD/H associated DUF4028 PF13220.6 NODE_68749_length_230_cov_3.169231_g60808_i0forward_frame_2 - 0.043 13.6 0.6 0.057 13.2 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) DUF943 PF06092.12 NODE_68748_length_230_cov_3.205128_g60807_i0reverse_frame_3 - 1.2e-14 54.2 0.6 1.3e-14 54.1 0.6 1.0 1 0 0 1 1 1 1 Enterobacterial putative membrane protein (DUF943) CBM_14 PF01607.24 NODE_68748_length_230_cov_3.205128_g60807_i0forward_frame_3 - 0.087 13.0 1.3 0.13 12.5 1.3 1.3 1 1 0 1 1 1 0 Chitin binding Peritrophin-A domain DUF3641 PF12345.8 NODE_68747_length_230_cov_3.271795_g60806_i0forward_frame_3 - 0.067 13.2 0.7 0.12 12.5 0.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3641) ACT_4 PF13291.6 NODE_68743_length_230_cov_3.876923_g60802_i0forward_frame_3 - 8.2e-07 29.5 0.2 1e-06 29.2 0.2 1.1 1 0 0 1 1 1 1 ACT domain Spermine_synth PF01564.17 NODE_68741_length_230_cov_4.287179_g60800_i0reverse_frame_2 - 6.5e-19 68.1 0.0 7e-19 68.0 0.0 1.0 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Response_reg PF00072.24 NODE_68740_length_230_cov_4.615385_g60799_i0forward_frame_2 - 1.2e-20 73.7 0.0 1.3e-20 73.7 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain YojJ PF10372.9 NODE_68739_length_230_cov_5.261538_g60798_i0reverse_frame_3 - 0.064 13.3 0.9 0.17 12.0 0.0 1.9 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus RPEL PF02755.15 NODE_68734_length_230_cov_21.712821_g60793_i0reverse_frame_3 - 0.098 12.4 0.1 4.9 7.0 0.1 2.2 2 0 0 2 2 2 0 RPEL repeat SelK_SelG PF10961.8 NODE_68733_length_230_cov_26.994872_g60792_i0forward_frame_3 - 0.11 13.2 0.3 0.13 12.9 0.3 1.1 1 0 0 1 1 1 0 Selenoprotein SelK_SelG Peptidase_S41 PF03572.18 NODE_68732_length_230_cov_29.338462_g60791_i0reverse_frame_3 - 0.16 11.5 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Peptidase family S41 Polbeta PF18765.1 NODE_68731_length_230_cov_30.015385_g60790_i0forward_frame_2 - 0.012 15.7 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase LRR_8 PF13855.6 NODE_68730_length_230_cov_31.928205_g60789_i0reverse_frame_3 - 0.012 15.4 1.5 0.016 15.0 1.5 1.2 1 0 0 1 1 1 0 Leucine rich repeat DUF2894 PF11445.8 NODE_68723_length_230_cov_45.230769_g60782_i0reverse_frame_2 - 0.019 15.4 0.8 0.021 15.3 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) zf_UBZ PF18439.1 NODE_68719_length_230_cov_50.010256_g60778_i0forward_frame_2 - 0.021 14.4 2.0 0.031 13.9 2.0 1.2 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger DDE_Tnp_1_3 PF13612.6 NODE_68716_length_230_cov_51.076923_g60775_i0reverse_frame_3 - 0.028 14.4 2.4 0.03 14.3 2.4 1.0 1 0 0 1 1 1 0 Transposase DDE domain FtsX PF02687.21 NODE_68716_length_230_cov_51.076923_g60775_i0forward_frame_2 - 4.4 7.8 12.1 5.4 7.5 12.1 1.1 1 0 0 1 1 1 0 FtsX-like permease family Sec63 PF02889.16 NODE_68714_length_230_cov_56.158974_g60773_i0forward_frame_3 - 2.6e-08 33.3 0.0 3e-08 33.1 0.0 1.0 1 0 0 1 1 1 1 Sec63 Brl domain UL42 PF17638.2 NODE_68713_length_230_cov_57.138462_g60772_i0reverse_frame_2 - 0.0037 17.2 0.3 0.0059 16.6 0.3 1.3 1 0 0 1 1 1 1 HCMV UL42 IlvGEDA_leader PF08046.11 NODE_68713_length_230_cov_57.138462_g60772_i0forward_frame_2 - 0.1 12.1 0.1 0.16 11.5 0.1 1.3 1 0 0 1 1 1 0 IlvGEDA operon leader peptide IL2RB_N1 PF18707.1 NODE_68708_length_230_cov_62.230769_g60767_i0reverse_frame_3 - 0.071 13.6 0.9 0.088 13.3 0.9 1.1 1 0 0 1 1 1 0 Interleukin-2 receptor subunit beta N-terminal domain 1 UPF0242 PF06785.11 NODE_68707_length_230_cov_62.507692_g60766_i0reverse_frame_2 - 1.8 8.7 4.0 1.9 8.5 4.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Antimicrobial_6 PF08036.11 NODE_68707_length_230_cov_62.507692_g60766_i0forward_frame_2 - 0.081 13.0 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide Antimicrobial_6 PF08036.11 NODE_68706_length_230_cov_62.605128_g60765_i0reverse_frame_2 - 0.77 9.9 3.7 0.78 9.9 0.6 2.1 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide PgaD PF13994.6 NODE_68706_length_230_cov_62.605128_g60765_i0forward_frame_3 - 0.02 15.0 0.0 0.022 14.8 0.0 1.1 1 0 0 1 1 1 0 PgaD-like protein MerT PF02411.15 NODE_68702_length_230_cov_64.810256_g60761_i0forward_frame_2 - 0.03 14.4 0.4 0.033 14.2 0.4 1.1 1 0 0 1 1 1 0 MerT mercuric transport protein TB PF00683.17 NODE_68699_length_230_cov_71.512821_g60758_i0reverse_frame_2 - 0.035 13.9 0.4 0.035 13.9 0.4 2.1 2 0 0 2 2 2 0 TB domain LAGLIDADG_WhiA PF14527.6 NODE_68696_length_230_cov_75.866667_g60755_i0reverse_frame_3 - 0.079 13.0 4.9 0.1 12.7 4.9 1.1 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain FANCAA PF15146.6 NODE_68696_length_230_cov_75.866667_g60755_i0reverse_frame_3 - 0.71 8.9 4.8 0.8 8.7 4.8 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated RRN3 PF05327.11 NODE_68696_length_230_cov_75.866667_g60755_i0reverse_frame_2 - 0.7 8.4 13.7 0.78 8.2 13.7 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Lep_receptor_Ig PF06328.11 NODE_68693_length_230_cov_78.333333_g60752_i0forward_frame_2 - 0.036 14.0 0.2 0.042 13.8 0.2 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain STAG PF08514.11 NODE_68690_length_230_cov_84.010256_g60749_i0reverse_frame_2 - 0.09 12.7 0.0 0.11 12.5 0.0 1.0 1 0 0 1 1 1 0 STAG domain DUF5365 PF17326.2 NODE_68689_length_230_cov_89.307692_g60748_i0reverse_frame_3 - 0.016 15.6 0.3 0.018 15.4 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5365) Fimbrial_PilY2 PF14481.6 NODE_68689_length_230_cov_89.307692_g60748_i0reverse_frame_3 - 0.12 12.1 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Type 4 fimbrial biogenesis protein PilY2 SCAPER_N PF16501.5 NODE_68687_length_230_cov_91.241026_g60746_i0forward_frame_2 - 0.064 13.3 0.0 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 S phase cyclin A-associated protein in the endoplasmic reticulum PAS_5 PF07310.13 NODE_68685_length_230_cov_94.835897_g60744_i0reverse_frame_2 - 0.15 11.9 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 PAS domain PRANC PF09372.10 NODE_68684_length_230_cov_95.235897_g60743_i0forward_frame_2 - 0.024 15.0 2.4 0.027 14.8 2.4 1.1 1 0 0 1 1 1 0 PRANC domain Na_sulph_symp PF00939.19 NODE_68682_length_230_cov_101.723077_g60741_i0reverse_frame_2 - 5.4e-16 58.7 3.7 5.8e-16 58.6 3.7 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region PPR_2 PF13041.6 NODE_68680_length_230_cov_101.943590_g60739_i0reverse_frame_2 - 4.9e-08 33.1 0.0 5.9e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 PPR repeat family PPR PF01535.20 NODE_68680_length_230_cov_101.943590_g60739_i0reverse_frame_2 - 0.00084 19.4 0.2 0.11 12.7 0.0 2.2 2 0 0 2 2 2 2 PPR repeat PPR_3 PF13812.6 NODE_68680_length_230_cov_101.943590_g60739_i0reverse_frame_2 - 0.0031 17.6 0.0 0.0041 17.2 0.0 1.1 1 0 0 1 1 1 1 Pentatricopeptide repeat domain NCE101 PF11654.8 NODE_68678_length_230_cov_110.107692_g60737_i0reverse_frame_3 - 0.13 12.0 0.1 0.21 11.3 0.1 1.3 1 0 0 1 1 1 0 Non-classical export protein 1 Avl9 PF09794.9 NODE_68678_length_230_cov_110.107692_g60737_i0forward_frame_2 - 0.011 14.4 1.0 0.012 14.4 1.0 1.0 1 0 0 1 1 1 0 Transport protein Avl9 MRP-L47 PF06984.13 NODE_68677_length_230_cov_112.682051_g60736_i0reverse_frame_2 - 0.051 13.7 0.6 0.074 13.2 0.6 1.3 1 0 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) DUF4656 PF15551.6 NODE_68676_length_230_cov_124.625641_g60735_i0reverse_frame_3 - 0.16 11.5 3.5 0.17 11.4 3.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) DUF4010 PF13194.6 NODE_68676_length_230_cov_124.625641_g60735_i0reverse_frame_3 - 0.22 11.2 0.0 0.26 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4010) CotJA PF11007.8 NODE_68674_length_230_cov_134.184615_g60733_i0reverse_frame_3 - 0.0048 16.7 0.0 0.19 11.6 0.0 2.3 2 0 0 2 2 2 2 Spore coat associated protein JA (CotJA) FixQ PF05545.11 NODE_68674_length_230_cov_134.184615_g60733_i0reverse_frame_2 - 0.049 13.6 0.0 0.072 13.1 0.0 1.2 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Nodulin_late PF07127.11 NODE_68670_length_230_cov_206.528205_g60729_i0reverse_frame_2 - 0.74 10.2 3.3 1.2 9.6 3.3 1.3 1 0 0 1 1 1 0 Late nodulin protein Phage_tail_S PF05069.13 NODE_68670_length_230_cov_206.528205_g60729_i0forward_frame_2 - 0.032 14.1 0.6 0.037 13.9 0.6 1.0 1 0 0 1 1 1 0 Phage virion morphogenesis family UPF0004 PF00919.20 NODE_68670_length_230_cov_206.528205_g60729_i0forward_frame_2 - 0.033 14.2 0.0 0.045 13.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0004 SOCS PF12610.8 NODE_68666_length_230_cov_535.456410_g60725_i0reverse_frame_3 - 0.26 11.7 1.1 21 5.6 0.1 2.1 2 0 0 2 2 2 0 Suppressor of cytokine signalling Phage_min_tail PF05939.13 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_3 - 0.00099 19.5 2.0 0.34 11.3 0.2 2.1 1 1 1 2 2 2 2 Phage minor tail protein DUF5126 PF17166.4 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_3 - 0.088 12.7 0.0 3.8 7.4 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5126) Ac76 PF05814.11 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_3 - 0.55 10.3 2.6 5.8 7.0 0.2 2.0 2 0 0 2 2 2 0 Orf76 (Ac76) Gram_pos_anchor PF00746.21 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_2 - 0.32 11.0 8.8 2.9 7.9 1.3 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Pyrophosphatase PF00719.19 NODE_68662_length_230_cov_1192.697436_g60721_i0reverse_frame_3 - 0.031 14.1 1.5 0.031 14.1 1.5 1.1 1 0 0 1 1 1 0 Inorganic pyrophosphatase S_4TM PF18159.1 NODE_68656_length_231_cov_0.816327_g60715_i0reverse_frame_3 - 6.1 6.0 6.0 6.5 6.0 6.0 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain PDGF_N PF04692.13 NODE_68656_length_231_cov_0.816327_g60715_i0reverse_frame_2 - 0.041 14.7 1.4 0.051 14.4 1.4 1.2 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region DUF2796 PF10986.8 NODE_68656_length_231_cov_0.816327_g60715_i0reverse_frame_2 - 3.6 7.5 15.8 3.9 7.4 15.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2796) DUF1676 PF07898.13 NODE_68656_length_231_cov_0.816327_g60715_i0forward_frame_3 - 0.012 15.7 0.9 0.012 15.6 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) Tmemb_9 PF05434.11 NODE_68656_length_231_cov_0.816327_g60715_i0forward_frame_3 - 0.021 14.7 0.7 0.026 14.4 0.7 1.1 1 0 0 1 1 1 0 TMEM9 Dev_Cell_Death PF10539.9 NODE_68651_length_231_cov_0.913265_g60710_i0forward_frame_3 - 0.089 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Development and cell death domain Importin_rep_4 PF18808.1 NODE_68645_length_231_cov_1.020408_g60704_i0reverse_frame_2 - 0.045 14.0 0.7 0.054 13.8 0.7 1.1 1 0 0 1 1 1 0 Importin repeat Alpha_GJ PF03229.13 NODE_68641_length_231_cov_1.061224_g60700_i0forward_frame_2 - 0.056 14.0 5.5 0.061 13.9 5.5 1.0 1 0 0 1 1 1 0 Alphavirus glycoprotein J TMEM154 PF15102.6 NODE_68641_length_231_cov_1.061224_g60700_i0forward_frame_2 - 0.13 12.1 7.1 0.15 11.9 7.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family Mucin PF01456.17 NODE_68641_length_231_cov_1.061224_g60700_i0forward_frame_2 - 0.16 11.9 16.7 0.17 11.9 16.7 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein SSP160 PF06933.11 NODE_68641_length_231_cov_1.061224_g60700_i0forward_frame_2 - 0.79 7.9 21.3 0.82 7.8 21.3 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 FSA_C PF10479.9 NODE_68641_length_231_cov_1.061224_g60700_i0forward_frame_2 - 9.3 4.2 17.0 9.3 4.2 17.0 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus YuiB PF14068.6 NODE_68638_length_231_cov_1.127551_g60697_i0reverse_frame_2 - 0.0029 18.2 2.4 0.0033 18.0 2.4 1.1 1 0 0 1 1 1 1 Putative membrane protein FSAP_sig_propep PF03032.15 NODE_68631_length_231_cov_1.204082_g60690_i0reverse_frame_2 - 0.11 12.6 2.2 0.11 12.6 2.2 1.6 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide Myosin_tail_1 PF01576.19 NODE_68629_length_231_cov_1.214286_g60688_i0reverse_frame_3 - 0.065 11.0 0.1 0.073 10.9 0.1 1.0 1 0 0 1 1 1 0 Myosin tail WLM PF08325.10 NODE_68624_length_231_cov_1.219388_g60683_i0reverse_frame_3 - 0.025 14.7 0.7 0.038 14.1 0.7 1.4 1 1 0 1 1 1 0 WLM domain Glyco_transf_15 PF01793.16 NODE_68624_length_231_cov_1.219388_g60683_i0forward_frame_2 - 0.00059 19.2 0.0 0.00059 19.2 0.0 1.0 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase Capsid_N PF16903.5 NODE_68623_length_231_cov_1.219388_g60682_i0forward_frame_3 - 0.028 14.1 0.7 0.03 14.0 0.7 1.1 1 0 0 1 1 1 0 Major capsid protein N-terminus PI_PP_I PF18363.1 NODE_68623_length_231_cov_1.219388_g60682_i0forward_frame_2 - 0.068 13.4 0.5 0.15 12.3 0.5 1.6 1 1 0 1 1 1 0 Phosphoinositide phosphatase insertion domain BAR_2 PF10455.9 NODE_68622_length_231_cov_1.219388_g60681_i0reverse_frame_3 - 0.0071 15.5 1.2 0.0079 15.4 1.2 1.1 1 0 0 1 1 1 1 Bin/amphiphysin/Rvs domain for vesicular trafficking HTH_57 PF18679.1 NODE_68622_length_231_cov_1.219388_g60681_i0reverse_frame_3 - 0.017 15.4 0.5 0.021 15.1 0.5 1.1 1 0 0 1 1 1 0 ThcOx helix turn helix domain NPV_P10 PF05531.12 NODE_68622_length_231_cov_1.219388_g60681_i0reverse_frame_3 - 0.039 14.4 0.2 0.054 14.0 0.2 1.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DivIC PF04977.15 NODE_68622_length_231_cov_1.219388_g60681_i0reverse_frame_3 - 1.3 8.9 6.5 5.7 6.8 1.7 2.1 1 1 1 2 2 2 0 Septum formation initiator Adeno_IVa2 PF02456.15 NODE_68622_length_231_cov_1.219388_g60681_i0forward_frame_2 - 0.072 11.9 1.2 0.068 11.9 1.2 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein Nucleos_tra2_C PF07662.13 NODE_68613_length_231_cov_1.260204_g60672_i0reverse_frame_2 - 0.019 14.8 0.3 0.021 14.7 0.3 1.1 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus FLYWCH_u PF16662.5 NODE_68611_length_231_cov_1.306122_g60670_i0forward_frame_3 - 0.001 19.1 0.3 0.002 18.1 0.3 1.5 1 0 0 1 1 1 1 FLYWCH-type zinc finger-containing protein 1 PRR18 PF15671.5 NODE_68609_length_231_cov_1.311224_g60668_i0reverse_frame_3 - 0.025 14.5 6.6 0.026 14.4 6.6 1.0 1 0 0 1 1 1 0 Proline-rich protein family 18 rve PF00665.26 NODE_68609_length_231_cov_1.311224_g60668_i0forward_frame_3 - 0.0004 20.6 0.0 0.00046 20.4 0.0 1.1 1 0 0 1 1 1 1 Integrase core domain Glycos_transf_4 PF00953.21 NODE_68601_length_231_cov_1.392857_g60660_i0reverse_frame_3 - 7.5e-06 26.0 2.7 8.7e-06 25.8 2.7 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 4 DUF4457 PF14652.6 NODE_68597_length_231_cov_1.428571_g60656_i0forward_frame_2 - 3.5e-06 26.5 0.0 3.6e-06 26.5 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4457) zf-CpG_bind_C PF12269.8 NODE_68594_length_231_cov_1.464286_g60653_i0reverse_frame_3 - 0.096 12.5 1.6 0.1 12.4 1.6 1.0 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain DUF4446 PF14584.6 NODE_68594_length_231_cov_1.464286_g60653_i0reverse_frame_3 - 0.16 11.9 1.7 0.18 11.8 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF5310 PF17237.2 NODE_68589_length_231_cov_1.479592_g60648_i0forward_frame_2 - 0.31 10.9 5.2 0.46 10.4 1.7 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5310) DUF3099 PF11298.8 NODE_68588_length_231_cov_1.505102_g60647_i0reverse_frame_3 - 0.055 13.6 0.4 0.068 13.3 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3099) UPF0160 PF03690.13 NODE_68588_length_231_cov_1.505102_g60647_i0forward_frame_3 - 0.16 11.6 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0160) DUF5000 PF16391.5 NODE_68587_length_231_cov_1.551020_g60646_i0reverse_frame_3 - 0.092 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF1364 PF07102.12 NODE_68585_length_231_cov_1.571429_g60644_i0forward_frame_3 - 0.047 13.5 0.8 0.057 13.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) Jas PF16135.5 NODE_68581_length_231_cov_1.602041_g60640_i0forward_frame_3 - 0.018 15.2 0.0 0.02 15.1 0.0 1.1 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling FPL PF09758.9 NODE_68574_length_231_cov_1.632653_g60633_i0reverse_frame_2 - 0.06 13.4 0.1 0.067 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein zf-SAP30 PF13866.6 NODE_68572_length_231_cov_1.663265_g60631_i0reverse_frame_3 - 0.0035 17.4 0.1 0.0053 16.8 0.1 1.3 1 0 0 1 1 1 1 SAP30 zinc-finger ZF-HD_dimer PF04770.12 NODE_68572_length_231_cov_1.663265_g60631_i0reverse_frame_2 - 0.97 9.8 6.3 0.21 11.9 1.3 2.0 1 1 1 2 2 2 0 ZF-HD protein dimerisation region YopE PF03545.13 NODE_68572_length_231_cov_1.663265_g60631_i0forward_frame_3 - 0.029 14.5 0.0 0.038 14.2 0.0 1.3 1 0 0 1 1 1 0 Yersinia virulence determinant (YopE) Lyase_1 PF00206.20 NODE_68565_length_231_cov_1.724490_g60624_i0reverse_frame_3 - 1e-20 74.4 0.1 1.1e-20 74.3 0.1 1.0 1 0 0 1 1 1 1 Lyase DUF4843 PF16132.5 NODE_68564_length_231_cov_1.729592_g60623_i0reverse_frame_2 - 0.15 11.6 0.0 0.18 11.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4843) ParD_antitoxin PF03693.14 NODE_68563_length_231_cov_1.734694_g60622_i0reverse_frame_2 - 0.11 13.0 0.3 0.16 12.4 0.3 1.2 1 0 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH Glyco_transf_41 PF13844.6 NODE_68562_length_231_cov_1.734694_g60621_i0forward_frame_3 - 0.083 11.3 0.0 0.089 11.2 0.0 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 41 Zn_Tnp_IS91 PF14319.6 NODE_68556_length_231_cov_1.872449_g60615_i0forward_frame_3 - 0.16 12.0 3.5 0.27 11.3 3.5 1.4 1 0 0 1 1 1 0 Transposase zinc-binding domain AAA_33 PF13671.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 2.5e-10 40.7 0.2 5.3e-05 23.4 0.0 2.0 1 1 1 2 2 2 2 AAA domain Zeta_toxin PF06414.12 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 9e-05 21.8 0.2 0.13 11.5 0.1 2.0 1 1 1 2 2 2 2 Zeta toxin MMR_HSR1 PF01926.23 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.0027 17.8 0.1 0.003 17.6 0.1 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.0051 16.1 0.1 0.022 14.1 0.1 1.8 1 1 0 1 1 1 1 6-phosphofructo-2-kinase RNA_helicase PF00910.22 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.0086 16.5 0.0 0.011 16.2 0.0 1.2 1 0 0 1 1 1 1 RNA helicase AAA_29 PF13555.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.01 15.6 0.0 0.033 13.9 0.0 1.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain Viral_helicase1 PF01443.18 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.011 15.5 0.0 0.012 15.4 0.0 1.3 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_18 PF13238.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.014 16.0 0.1 0.098 13.2 0.1 1.9 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.014 14.6 0.0 0.02 14.1 0.0 1.3 1 1 0 1 1 1 0 NB-ARC domain AAA_22 PF13401.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.014 15.6 0.0 0.14 12.4 0.0 1.8 1 1 1 2 2 2 0 AAA domain KTI12 PF08433.10 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.015 14.8 0.0 0.023 14.2 0.0 1.3 1 1 0 1 1 1 0 Chromatin associated protein KTI12 Ploopntkinase3 PF18751.1 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.019 14.9 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 ABC_tran PF00005.27 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.021 15.3 0.0 0.022 15.2 0.0 1.3 1 1 0 1 1 1 0 ABC transporter AAA_25 PF13481.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.029 14.0 0.0 0.055 13.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.03 14.3 0.0 0.11 12.4 0.0 1.7 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.18 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.04 13.3 0.1 0.16 11.3 0.0 1.8 1 1 1 2 2 2 0 FtsK/SpoIIIE family AAA_28 PF13521.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.054 13.7 0.0 0.074 13.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.055 13.9 0.0 0.055 13.9 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.11 12.4 0.0 0.13 12.1 0.0 1.3 1 1 0 1 1 1 0 RsgA GTPase Enolase_C PF00113.22 NODE_68552_length_231_cov_1.913265_g60611_i0forward_frame_2 - 6e-31 107.8 0.9 6.2e-31 107.7 0.9 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain MR_MLE_C PF13378.6 NODE_68552_length_231_cov_1.913265_g60611_i0forward_frame_2 - 0.055 13.0 0.0 0.058 13.0 0.0 1.0 1 0 0 1 1 1 0 Enolase C-terminal domain-like MAAL_C PF07476.11 NODE_68552_length_231_cov_1.913265_g60611_i0forward_frame_2 - 0.072 12.2 0.7 0.084 12.0 0.7 1.0 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus MraZ PF02381.18 NODE_68547_length_231_cov_1.959184_g60606_i0reverse_frame_3 - 0.026 14.5 0.0 0.037 14.0 0.0 1.3 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Myotub-related PF06602.14 NODE_68544_length_231_cov_2.000000_g60603_i0reverse_frame_2 - 2.7e-29 102.2 0.0 2.9e-29 102.1 0.0 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain Y_phosphatase PF00102.27 NODE_68544_length_231_cov_2.000000_g60603_i0reverse_frame_2 - 0.06 12.9 0.0 0.064 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Sep15_SelM PF08806.11 NODE_68543_length_231_cov_2.005102_g60602_i0forward_frame_2 - 0.11 12.7 0.3 5.1 7.3 0.3 2.1 1 1 0 1 1 1 0 Sep15/SelM redox domain SH3-RhoG_link PF16609.5 NODE_68537_length_231_cov_2.102041_g60596_i0forward_frame_3 - 0.43 10.3 1.6 0.5 10.1 1.6 1.1 1 0 0 1 1 1 0 SH3-RhoGEF linking unstructured region SMN PF06003.12 NODE_68537_length_231_cov_2.102041_g60596_i0forward_frame_3 - 2.6 7.3 5.0 2.7 7.2 5.0 1.2 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) Wzz PF02706.15 NODE_68531_length_231_cov_2.132653_g60590_i0reverse_frame_2 - 1.1e-18 67.3 0.2 1.3e-18 67.1 0.2 1.0 1 0 0 1 1 1 1 Chain length determinant protein Lamprin PF06403.11 NODE_68530_length_231_cov_2.132653_g60589_i0forward_frame_3 - 1.2 9.1 8.6 3.1 7.8 4.7 2.4 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_68530_length_231_cov_2.132653_g60589_i0forward_frame_2 - 0.36 10.8 2.5 1 9.3 1.4 1.9 1 1 1 2 2 2 0 Lamprin DUF2960 PF11173.8 NODE_68530_length_231_cov_2.132653_g60589_i0forward_frame_2 - 0.65 10.5 4.2 14 6.2 0.8 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2960) Propeptide_C1 PF08127.13 NODE_68522_length_231_cov_2.214286_g60581_i0forward_frame_2 - 0.082 12.8 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Peptidase family C1 propeptide IRF-2BP1_2 PF11261.8 NODE_68519_length_231_cov_2.260204_g60578_i0forward_frame_2 - 0.0069 15.9 0.1 0.013 15.1 0.1 1.4 1 0 0 1 1 1 1 Interferon regulatory factor 2-binding protein zinc finger MmgE_PrpD PF03972.14 NODE_68518_length_231_cov_2.270408_g60577_i0reverse_frame_3 - 0.15 10.6 0.3 0.15 10.6 0.3 1.0 1 0 0 1 1 1 0 MmgE/PrpD family zf-CCHC PF00098.23 NODE_68518_length_231_cov_2.270408_g60577_i0reverse_frame_2 - 1.6e-06 27.9 5.2 2.5e-06 27.3 5.2 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_68518_length_231_cov_2.270408_g60577_i0reverse_frame_2 - 0.0066 16.2 4.1 0.01 15.6 4.1 1.3 1 0 0 1 1 1 1 Zinc knuckle Na_Ca_ex PF01699.24 NODE_68518_length_231_cov_2.270408_g60577_i0forward_frame_3 - 0.032 14.2 0.6 0.035 14.1 0.6 1.0 1 0 0 1 1 1 0 Sodium/calcium exchanger protein CAF1C_H4-bd PF12265.8 NODE_68518_length_231_cov_2.270408_g60577_i0forward_frame_2 - 0.07 13.4 0.0 0.087 13.1 0.0 1.2 1 0 0 1 1 1 0 Histone-binding protein RBBP4 or subunit C of CAF1 complex UBA_3 PF09288.10 NODE_68517_length_231_cov_2.275510_g60576_i0reverse_frame_3 - 0.034 14.0 0.2 0.043 13.6 0.2 1.2 1 0 0 1 1 1 0 Fungal ubiquitin-associated domain Mu-conotoxin PF05374.12 NODE_68516_length_231_cov_2.275510_g60575_i0forward_frame_3 - 0.12 12.4 4.2 0.12 12.4 4.2 1.7 2 0 0 2 2 2 0 Mu-Conotoxin IRK_N PF08466.10 NODE_68515_length_231_cov_2.316327_g60574_i0forward_frame_2 - 0.057 13.6 0.1 0.08 13.1 0.1 1.3 1 0 0 1 1 1 0 Inward rectifier potassium channel N-terminal RepA_N PF06970.11 NODE_68514_length_231_cov_2.316327_g60573_i0forward_frame_3 - 0.026 14.4 0.1 0.04 13.8 0.1 1.3 1 0 0 1 1 1 0 Replication initiator protein A (RepA) N-terminus ANAPC4 PF12896.7 NODE_68513_length_231_cov_2.326531_g60572_i0forward_frame_3 - 0.021 14.3 0.1 0.025 14.1 0.1 1.0 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 APOBEC_C PF05240.14 NODE_68513_length_231_cov_2.326531_g60572_i0forward_frame_3 - 0.064 13.2 0.2 0.07 13.1 0.2 1.3 1 1 0 1 1 1 0 APOBEC-like C-terminal domain Pkinase PF00069.25 NODE_68512_length_231_cov_2.357143_g60571_i0forward_frame_2 - 0.0016 17.8 0.4 0.0017 17.8 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_68512_length_231_cov_2.357143_g60571_i0forward_frame_2 - 0.011 15.0 0.1 0.012 15.0 0.1 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase RVT_1 PF00078.27 NODE_68508_length_231_cov_2.408163_g60567_i0forward_frame_2 - 0.028 14.0 0.0 0.03 13.8 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) LIP1 PF15904.5 NODE_68508_length_231_cov_2.408163_g60567_i0forward_frame_2 - 0.15 12.5 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 pKID PF02173.17 NODE_68507_length_231_cov_2.433673_g60566_i0reverse_frame_3 - 0.062 12.8 0.1 0.11 12.0 0.1 1.4 1 0 0 1 1 1 0 pKID domain TACI-CRD2 PF09305.10 NODE_68505_length_231_cov_2.484694_g60564_i0forward_frame_3 - 0.038 14.0 0.2 5.8 7.0 0.0 2.2 2 0 0 2 2 2 0 TACI, cysteine-rich domain zf-HC5HC2H_2 PF13832.6 NODE_68501_length_231_cov_2.581633_g60560_i0forward_frame_2 - 0.036 14.2 4.0 0.044 14.0 4.0 1.1 1 0 0 1 1 1 0 PHD-zinc-finger like domain Dor1 PF04124.12 NODE_68495_length_231_cov_2.734694_g60554_i0forward_frame_2 - 0.017 13.8 0.1 0.019 13.7 0.1 1.0 1 0 0 1 1 1 0 Dor1-like family Lipoprotein_3 PF00938.17 NODE_68495_length_231_cov_2.734694_g60554_i0forward_frame_2 - 0.038 14.2 0.4 0.05 13.8 0.4 1.2 1 0 0 1 1 1 0 Lipoprotein Fur_reg_FbpB PF13040.6 NODE_68495_length_231_cov_2.734694_g60554_i0forward_frame_2 - 0.06 12.9 1.2 3.2 7.4 0.3 2.2 2 0 0 2 2 2 0 Fur-regulated basic protein B UBA_3 PF09288.10 NODE_68494_length_231_cov_2.739796_g60553_i0forward_frame_3 - 0.9 9.4 5.1 7.2 6.5 0.7 2.3 2 0 0 2 2 2 0 Fungal ubiquitin-associated domain DUF4706 PF15797.5 NODE_68492_length_231_cov_2.857143_g60551_i0forward_frame_3 - 0.0011 19.5 3.4 0.0013 19.2 3.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4706) UPF0564 PF10595.9 NODE_68492_length_231_cov_2.857143_g60551_i0forward_frame_2 - 2.5e-07 30.1 2.8 3e-07 29.9 2.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0564 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks320.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks320.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks320.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks320.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:06 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CRC_subunit PF08624.10 NODE_68491_length_231_cov_2.867347_g60550_i0reverse_frame_2 - 0.21 12.0 0.0 0.23 11.9 0.0 1.1 1 0 0 1 1 1 0 Chromatin remodelling complex Rsc7/Swp82 subunit RRM_1 PF00076.22 NODE_68489_length_231_cov_2.928571_g60548_i0reverse_frame_3 - 0.071 12.9 0.0 0.089 12.6 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TPIP1 PF15338.6 NODE_68486_length_231_cov_3.051020_g60545_i0reverse_frame_2 - 0.0026 17.8 1.5 0.0031 17.6 1.5 1.1 1 0 0 1 1 1 1 p53-regulated apoptosis-inducing protein 1 Nucleoside_tran PF01733.18 NODE_68484_length_231_cov_3.056122_g60543_i0forward_frame_3 - 2e-08 34.0 1.1 2.1e-08 33.9 1.1 1.0 1 0 0 1 1 1 1 Nucleoside transporter ABC2_membrane_3 PF12698.7 NODE_68483_length_231_cov_3.061224_g60542_i0reverse_frame_2 - 0.13 11.4 2.9 0.12 11.5 2.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Xin PF08043.12 NODE_68483_length_231_cov_3.061224_g60542_i0reverse_frame_2 - 0.79 9.4 2.5 1.4 8.6 2.5 1.4 1 0 0 1 1 1 0 Xin repeat ADH_N PF08240.12 NODE_68481_length_231_cov_3.234694_g60540_i0reverse_frame_2 - 2.8e-13 49.7 0.1 3e-13 49.6 0.1 1.0 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain zf-C3HC4_3 PF13920.6 NODE_68480_length_231_cov_3.280612_g60539_i0reverse_frame_3 - 0.0038 17.1 2.7 0.0046 16.8 2.7 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_68480_length_231_cov_3.280612_g60539_i0reverse_frame_3 - 0.0049 16.7 3.5 0.0066 16.3 3.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_68480_length_231_cov_3.280612_g60539_i0reverse_frame_3 - 0.067 13.1 3.1 0.09 12.6 3.1 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Gtr1_RagA PF04670.12 NODE_68476_length_231_cov_4.423469_g60535_i0reverse_frame_3 - 0.029 13.7 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region FAM199X PF15814.5 NODE_68475_length_231_cov_4.959184_g60534_i0reverse_frame_3 - 0.071 12.2 1.1 0.071 12.2 1.1 1.0 1 0 0 1 1 1 0 Protein family FAM199X C6_DPF PF10170.9 NODE_68472_length_231_cov_14.352041_g60531_i0forward_frame_3 - 0.043 14.2 1.5 0.054 13.9 1.5 1.3 1 1 0 1 1 1 0 Cysteine-rich domain DUF948 PF06103.11 NODE_68467_length_231_cov_33.897959_g60526_i0reverse_frame_2 - 0.031 14.5 0.0 0.037 14.3 0.0 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Ribophorin_II PF05817.14 NODE_68465_length_231_cov_35.030612_g60524_i0forward_frame_2 - 3.9 5.9 6.6 4.4 5.7 6.6 1.0 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II Treslin_N PF15292.6 NODE_68464_length_231_cov_36.576531_g60523_i0reverse_frame_2 - 0.087 11.1 0.0 0.098 11.0 0.0 1.0 1 0 0 1 1 1 0 Treslin N-terminus Adeno_52K PF03052.15 NODE_68464_length_231_cov_36.576531_g60523_i0reverse_frame_2 - 0.2 11.1 0.0 0.21 11.0 0.0 1.1 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa DUF1140 PF06600.11 NODE_68464_length_231_cov_36.576531_g60523_i0forward_frame_2 - 0.012 16.0 0.4 0.014 15.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1140) Cadherin_tail PF15974.5 NODE_68462_length_231_cov_38.438776_g60521_i0reverse_frame_3 - 5 7.5 9.9 12 6.2 9.9 1.7 1 1 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region FBP_C PF16571.5 NODE_68459_length_231_cov_40.974490_g60518_i0reverse_frame_2 - 0.066 12.7 0.2 0.078 12.5 0.2 1.1 1 0 0 1 1 1 0 FBP C-terminal treble-clef zinc-finger TIR_2 PF13676.6 NODE_68458_length_231_cov_41.678571_g60517_i0reverse_frame_2 - 0.0025 18.4 0.0 0.0029 18.2 0.0 1.0 1 0 0 1 1 1 1 TIR domain TIR PF01582.20 NODE_68458_length_231_cov_41.678571_g60517_i0reverse_frame_2 - 0.04 13.7 0.0 0.045 13.6 0.0 1.1 1 0 0 1 1 1 0 TIR domain CTV_P23 PF04808.12 NODE_68457_length_231_cov_41.846939_g60516_i0forward_frame_3 - 0.12 11.9 0.1 0.14 11.7 0.1 1.1 1 0 0 1 1 1 0 Citrus tristeza virus (CTV) P23 protein DUF3398 PF11878.8 NODE_68456_length_231_cov_45.209184_g60515_i0reverse_frame_2 - 0.045 14.2 1.3 0.048 14.1 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3398) CedA PF10729.9 NODE_68454_length_231_cov_46.816327_g60513_i0reverse_frame_3 - 0.027 14.3 0.0 0.032 14.0 0.0 1.1 1 0 0 1 1 1 0 Cell division activator CedA DUF2574 PF10836.8 NODE_68453_length_231_cov_47.015306_g60512_i0forward_frame_2 - 0.0021 17.9 0.2 0.0025 17.7 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2574) DUF1096 PF06493.11 NODE_68453_length_231_cov_47.015306_g60512_i0forward_frame_2 - 0.7 10.4 7.5 3.8 8.0 7.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1096) DUF2628 PF10947.8 NODE_68451_length_231_cov_48.653061_g60510_i0forward_frame_2 - 0.099 13.0 6.3 0.12 12.8 6.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) LHC PF00556.20 NODE_68450_length_231_cov_53.163265_g60509_i0reverse_frame_2 - 0.2 11.9 0.3 0.32 11.3 0.3 1.2 1 0 0 1 1 1 0 Antenna complex alpha/beta subunit AIF-MLS PF14962.6 NODE_68449_length_231_cov_53.913265_g60508_i0reverse_frame_2 - 3.6 7.5 13.9 3.8 7.4 13.9 1.0 1 0 0 1 1 1 0 Mitochondria Localisation Sequence NERD PF08378.11 NODE_68448_length_231_cov_54.193878_g60507_i0forward_frame_2 - 0.11 13.0 0.4 9.7 6.7 0.0 2.0 1 1 1 2 2 2 0 Nuclease-related domain Pirin PF02678.16 NODE_68447_length_231_cov_54.372449_g60506_i0forward_frame_2 - 0.13 12.2 0.1 0.19 11.7 0.1 1.1 1 0 0 1 1 1 0 Pirin HCV_NS2 PF01538.18 NODE_68441_length_231_cov_60.173469_g60500_i0reverse_frame_3 - 0.14 11.8 0.2 0.14 11.8 0.2 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 Filament PF00038.21 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.00062 19.4 6.7 0.00064 19.4 6.7 1.0 1 0 0 1 1 1 1 Intermediate filament protein CLZ PF16526.5 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0015 18.9 6.4 0.0072 16.7 3.0 2.0 2 0 0 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Tropomyosin PF00261.20 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0023 17.3 7.4 0.0032 16.9 7.4 1.2 1 0 0 1 1 1 1 Tropomyosin BicD PF09730.9 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0043 15.6 6.4 0.0051 15.3 6.4 1.0 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D SHE3 PF17078.5 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0049 16.6 4.8 0.0069 16.1 4.8 1.1 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 FliD_C PF07195.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0069 15.8 2.8 0.0069 15.8 2.8 1.4 1 1 0 1 1 1 1 Flagellar hook-associated protein 2 C-terminus Phage_GP20 PF06810.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0092 15.8 5.9 0.011 15.6 5.9 1.1 1 0 0 1 1 1 1 Phage minor structural protein GP20 CC2-LZ PF16516.5 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0093 16.3 7.7 0.027 14.8 7.8 1.7 1 1 0 1 1 1 1 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF812 PF05667.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.012 14.5 5.4 0.013 14.4 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Gp-FAR-1 PF05823.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.012 15.9 1.9 0.015 15.7 1.9 1.2 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) TPR_MLP1_2 PF07926.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.016 15.3 10.0 0.054 13.6 5.6 2.0 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF3584 PF12128.8 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.018 12.6 5.8 0.021 12.4 5.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DHR10 PF18595.1 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.028 14.5 6.5 0.028 14.5 6.5 2.0 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain TMPIT PF07851.13 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.028 13.7 5.2 0.033 13.5 5.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein Fib_alpha PF08702.10 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.043 14.0 5.6 0.16 12.2 5.6 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Herpes_UL14 PF03580.14 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.044 14.0 2.7 0.05 13.9 2.7 1.1 1 0 0 1 1 1 0 Herpesvirus UL14-like protein FlxA PF14282.6 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.048 13.7 10.7 0.092 12.7 10.7 1.5 1 1 0 1 1 1 0 FlxA-like protein Laminin_II PF06009.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.053 13.5 3.9 0.046 13.7 2.3 1.5 1 1 0 1 1 1 0 Laminin Domain II DASH_Dam1 PF08653.10 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.058 13.2 1.6 1.9 8.4 0.4 2.2 2 0 0 2 2 2 0 DASH complex subunit Dam1 Cas_DxTHG PF09455.10 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.063 12.8 1.6 0.061 12.9 1.6 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family Fmp27_WPPW PF10359.9 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.074 11.9 5.9 0.082 11.8 5.9 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain ACCA PF03255.14 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.078 12.9 4.3 0.095 12.6 4.3 1.1 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Baculo_PEP_C PF04513.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.079 13.0 0.3 0.098 12.7 0.3 1.2 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus CdvA PF18822.1 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.09 12.6 9.2 0.86 9.4 9.0 2.3 1 1 1 2 2 2 0 CdvA-like coiled-coil domain COG2 PF06148.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.098 12.7 5.2 0.28 11.3 5.2 1.6 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 ApoO PF09769.9 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.1 12.6 0.7 0.19 11.7 0.6 1.6 1 1 0 1 1 1 0 Apolipoprotein O TSC22 PF01166.18 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.12 12.7 5.5 0.36 11.2 0.7 2.4 1 1 1 2 2 2 0 TSC-22/dip/bun family OmpH PF03938.14 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.13 12.6 7.5 0.17 12.2 7.5 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.16 11.3 2.8 0.21 10.9 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) MbeB_N PF04837.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.17 12.2 7.5 0.51 10.7 2.1 2.9 1 1 2 3 3 3 0 MbeB-like, N-term conserved region DivIC PF04977.15 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.18 11.6 12.1 0.28 11.0 1.8 2.7 1 1 2 3 3 3 0 Septum formation initiator P35 PF02331.15 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.2 11.0 1.7 0.22 10.9 0.6 1.5 1 1 1 2 2 2 0 Apoptosis preventing protein FliD_N PF02465.18 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.25 12.1 4.5 0.32 11.7 4.5 1.2 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus FapA PF03961.13 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.26 9.9 5.7 0.28 9.7 5.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF1515 PF07439.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.27 11.3 2.8 0.41 10.7 2.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) Fzo_mitofusin PF04799.13 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.27 10.7 4.5 0.6 9.6 4.7 1.5 1 1 0 1 1 1 0 fzo-like conserved region SlyX PF04102.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.37 11.5 8.8 0.64 10.7 3.0 2.4 1 1 1 2 2 2 0 SlyX TolA_bind_tri PF16331.5 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.41 10.8 10.6 4.3 7.5 4.0 2.2 1 1 1 2 2 2 0 TolA binding protein trimerisation Lectin_N PF03954.14 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.5 10.1 6.1 0.78 9.5 1.9 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Csm1_N PF18504.1 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.53 10.7 9.6 3.5 8.0 2.7 2.2 1 1 1 2 2 2 0 Csm1 N-terminal domain YtxH PF12732.7 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.58 10.7 6.0 3.5 8.2 6.0 1.9 1 1 0 1 1 1 0 YtxH-like protein Exonuc_VII_L PF02601.15 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.59 9.7 4.1 0.61 9.6 4.1 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Tho2 PF11262.8 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.84 8.8 5.4 0.93 8.6 5.4 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Pox_A_type_inc PF04508.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 1.1 9.2 8.0 1.1 9.3 0.4 3.1 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat Swi5 PF07061.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 1.1 9.3 8.1 0.91 9.7 5.2 2.0 1 1 1 2 2 2 0 Swi5 XhlA PF10779.9 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 1.4 9.2 8.6 1.2 9.3 6.0 2.0 1 1 1 2 2 2 0 Haemolysin XhlA 60KD_IMP PF02096.20 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 4.1 7.3 5.6 5.6 6.8 0.1 2.1 1 1 1 2 2 2 0 60Kd inner membrane protein DUF1967 PF09269.11 NODE_68439_length_231_cov_61.341837_g60498_i0forward_frame_2 - 0.12 12.3 0.3 0.17 11.9 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) Tombus_P33 PF08500.10 NODE_68438_length_231_cov_61.484694_g60497_i0forward_frame_2 - 0.1 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Tombusvirus p33 CGI-121 PF08617.10 NODE_68435_length_231_cov_66.979592_g60494_i0reverse_frame_2 - 0.04 14.0 0.0 0.04 14.0 0.0 1.1 1 0 0 1 1 1 0 Kinase binding protein CGI-121 DUF294 PF03445.13 NODE_68434_length_231_cov_72.974490_g60493_i0reverse_frame_3 - 0.086 12.7 0.2 0.1 12.4 0.2 1.1 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 DUF1036 PF06282.11 NODE_68434_length_231_cov_72.974490_g60493_i0reverse_frame_2 - 0.075 13.6 0.0 0.077 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1036) ArsP_2 PF11449.8 NODE_68434_length_231_cov_72.974490_g60493_i0forward_frame_2 - 0.083 12.1 0.3 0.083 12.1 0.3 1.1 1 0 0 1 1 1 0 Putative, 10TM heavy-metal exporter Membralin PF09746.9 NODE_68425_length_231_cov_96.612245_g60484_i0forward_frame_3 - 0.052 12.6 0.0 0.057 12.5 0.0 1.1 1 0 0 1 1 1 0 Tumour-associated protein DUF1242 PF06842.12 NODE_68424_length_231_cov_100.739796_g60483_i0reverse_frame_3 - 0.2 11.5 2.0 0.34 10.8 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1242) Toxin_16 PF07945.11 NODE_68424_length_231_cov_100.739796_g60483_i0forward_frame_2 - 0.019 14.8 2.1 0.027 14.4 2.1 1.3 1 0 0 1 1 1 0 Janus-atracotoxin Jacalin PF01419.17 NODE_68420_length_231_cov_137.469388_g60479_i0reverse_frame_3 - 2.3e-07 30.8 0.1 2.5e-07 30.7 0.1 1.0 1 0 0 1 1 1 1 Jacalin-like lectin domain DUF1600 PF07667.11 NODE_68420_length_231_cov_137.469388_g60479_i0forward_frame_3 - 0.057 13.6 0.7 0.066 13.4 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) Keratin_assoc PF09775.9 NODE_68418_length_231_cov_196.857143_g60477_i0reverse_frame_2 - 0.035 13.7 0.6 0.04 13.6 0.6 1.2 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 OFeT_1 PF16955.5 NODE_68411_length_231_cov_707.571429_g60470_i0reverse_frame_3 - 0.1 12.3 0.3 0.1 12.3 0.3 1.1 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter Ribosomal_L13e PF01294.18 ORF99889 - 0.00058 19.8 0.5 0.00064 19.6 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L13e NADH_4Fe-4S PF10589.9 ORF99802 - 0.062 13.4 3.4 0.087 12.9 3.4 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TMEM132D_C PF15706.5 ORF99677 - 0.0017 18.1 0.5 0.0025 17.6 0.3 1.3 1 1 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF1180 PF06679.12 ORF99677 - 9.7 6.6 7.2 11 6.4 7.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Tox-GHH2 PF15635.6 ORF99352 - 0.062 13.8 0.1 0.065 13.8 0.1 1.2 1 0 0 1 1 1 0 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 RRM_2 PF04059.12 ORF99100 - 1.5e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 Cohesin_HEAT PF12765.7 ORF9906 - 0.0021 18.3 0.1 0.0044 17.3 0.1 1.6 1 0 0 1 1 1 1 HEAT repeat associated with sister chromatid cohesion DUF2551 PF10826.8 ORF9906 - 0.036 14.3 0.1 2.9 8.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2551) MMS19_N PF14500.6 ORF9906 - 0.038 13.6 0.0 0.12 12.0 0.0 1.7 1 1 1 2 2 2 0 Dos2-interacting transcription regulator of RNA-Pol-II HEAT PF02985.22 ORF9906 - 0.04 14.2 0.0 2.2 8.8 0.0 2.3 2 0 0 2 2 2 0 HEAT repeat WWE PF02825.20 ORF98819 - 1.4e-09 38.4 0.9 1.7e-09 38.2 0.9 1.1 1 0 0 1 1 1 1 WWE domain CIDR1_gamma PF18562.1 ORF98693 - 0.12 12.5 0.5 1.5 9.0 0.0 2.1 2 0 0 2 2 2 0 Cysteine-Rich Interdomain Region 1 gamma PHD PF00628.29 ORF98676 - 0.0032 17.3 0.2 0.0047 16.8 0.2 1.2 1 0 0 1 1 1 1 PHD-finger P66_CC PF16563.5 ORF98352 - 0.068 12.8 8.0 1.3 8.7 0.7 2.9 3 0 0 3 3 3 0 Coiled-coil and interaction region of P66A and P66B with MBD2 DUF2237 PF09996.9 ORF98003 - 0.12 12.4 0.2 0.14 12.1 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2237) HSA PF07529.13 ORF97909 - 0.017 15.4 0.3 0.017 15.4 0.3 1.9 2 0 0 2 2 2 0 HSA DUF3106 PF11304.8 ORF97909 - 0.039 14.4 0.2 0.053 14.0 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3106) Phe_tRNA-synt_N PF02912.18 ORF97909 - 0.067 13.1 1.9 0.22 11.5 0.1 2.0 2 0 0 2 2 2 0 Aminoacyl tRNA synthetase class II, N-terminal domain DNAPolymera_Pol PF11590.8 ORF97825 - 2.1 8.3 5.4 3.4 7.6 2.2 2.5 2 1 0 2 2 2 0 DNA polymerase catalytic subunit Pol MitoNEET_N PF10660.9 ORF97604 - 7.1 6.7 8.0 6.8 6.8 1.5 2.2 1 1 1 2 2 2 0 Iron-containing outer mitochondrial membrane protein N-terminus Pkinase_C PF00433.24 ORF97517 - 0.00049 20.7 4.6 0.00087 19.9 4.6 1.5 1 1 0 1 1 1 1 Protein kinase C terminal domain TMEM100 PF16311.5 ORF9722 - 1.5 8.4 4.7 3.1 7.4 0.7 2.0 1 1 0 2 2 2 0 Transmembrane protein 100 Seryl_tRNA_N PF02403.22 ORF97071 - 5.2e-14 52.4 0.7 6.1e-14 52.2 0.7 1.0 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain MbtH PF03621.13 ORF96649 - 0.08 12.4 0.0 0.13 11.7 0.0 1.4 1 0 0 1 1 1 0 MbtH-like protein GBP_PSP PF02425.15 ORF96649 - 0.11 12.2 0.2 0.21 11.3 0.2 1.4 1 0 0 1 1 1 0 Paralytic/GBP/PSP peptide LVIVD PF08309.11 ORF96340 - 0.18 11.2 2.3 4 6.8 0.1 2.9 3 0 0 3 3 3 0 LVIVD repeat BRCA-2_OB3 PF09104.10 ORF95763 - 0.048 13.3 0.1 0.062 13.0 0.1 1.2 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 LysR_substrate PF03466.20 ORF95440 - 0.11 11.9 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 LysR substrate binding domain Carb_anhydrase PF00194.21 ORF95381 - 0.00032 20.3 0.0 0.00034 20.2 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Vpu PF00558.19 ORF95021 - 0.44 10.4 3.4 0.3 10.9 2.1 1.5 1 1 0 1 1 1 0 Vpu protein TMEMspv1-c74-12 PF11044.8 ORF95021 - 0.54 10.3 6.7 0.65 10.0 1.8 2.2 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein F-box-like PF12937.7 ORF94972 - 0.00023 21.0 0.0 0.00037 20.3 0.0 1.3 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 ORF94972 - 0.11 12.5 0.1 0.28 11.1 0.0 1.6 2 0 0 2 2 2 0 F-box domain Baculo_helicase PF04735.12 ORF9495 - 0.017 12.7 0.9 0.019 12.5 0.9 1.0 1 0 0 1 1 1 0 Baculovirus DNA helicase AnfO_nitrog PF09582.10 ORF9495 - 0.043 13.2 0.1 0.048 13.0 0.1 1.0 1 0 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) PIF PF05092.12 ORF94931 - 0.24 10.1 0.0 0.26 10.0 0.0 1.0 1 0 0 1 1 1 0 Per os infectivity PTPlike_phytase PF14566.6 ORF92323 - 0.015 15.5 0.2 0.017 15.3 0.2 1.1 1 0 0 1 1 1 0 Inositol hexakisphosphate Mgm101p PF06420.12 ORF92323 - 0.031 13.8 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial genome maintenance MGM101 DUF1433 PF07252.11 ORF9176 - 0.016 15.5 0.3 0.017 15.3 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1433) Prot_ATP_ID_OB PF16450.5 ORF91723 - 0.077 13.0 1.8 4.6 7.3 1.8 2.2 1 1 0 1 1 1 0 Proteasomal ATPase OB C-terminal domain FAM221 PF14753.6 ORF91582 - 2.2e-17 63.3 0.4 2.5e-17 63.1 0.4 1.1 1 0 0 1 1 1 1 Protein FAM221A/B Vps16_N PF04841.13 ORF91582 - 0.068 11.9 0.0 0.074 11.8 0.0 1.0 1 0 0 1 1 1 0 Vps16, N-terminal region TMEM100 PF16311.5 ORF91512 - 1.5 8.4 4.7 3.1 7.4 0.7 2.0 1 1 0 2 2 2 0 Transmembrane protein 100 FTP PF07504.13 ORF91427 - 0.01 15.6 0.2 0.018 14.8 0.2 1.4 1 1 0 1 1 1 0 Fungalysin/Thermolysin Propeptide Motif CAP59_mtransfer PF11735.8 ORF9076 - 0.12 12.0 0.1 0.13 11.9 0.1 1.0 1 0 0 1 1 1 0 Cryptococcal mannosyltransferase 1 Molydop_binding PF01568.21 ORF89570 - 1.5e-13 50.7 0.0 1.7e-13 50.5 0.0 1.0 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain IBN_N PF03810.19 ORF89555 - 0.028 14.3 0.0 0.04 13.8 0.0 1.2 1 0 0 1 1 1 0 Importin-beta N-terminal domain DUF432 PF04254.13 ORF89068 - 0.064 13.4 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF432) Thyroglobulin_1 PF00086.18 ORF88977 - 0.099 12.3 1.4 0.5 10.1 0.4 2.0 2 0 0 2 2 2 0 Thyroglobulin type-1 repeat Filamin PF00630.19 ORF88751 - 0.029 15.2 0.0 0.091 13.6 0.0 1.7 1 1 1 2 2 2 0 Filamin/ABP280 repeat Microvir_lysis PF04517.12 ORF88388 - 1.5 8.8 6.6 0.26 11.2 1.4 2.0 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus TTL PF03133.15 ORF8836 - 2.1e-09 37.0 0.3 2.1e-09 36.9 0.3 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Imm27 PF15590.6 ORF88354 - 0.12 12.2 0.3 1 9.2 0.3 2.0 1 1 0 1 1 1 0 Immunity protein 27 Aa_trans PF01490.18 ORF88157 - 0.0052 15.5 0.0 0.0058 15.4 0.0 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein FAM209 PF15206.6 ORF88157 - 0.034 14.0 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 FAM209 family Macro PF01661.21 ORF877 - 2e-11 43.9 0.4 2.3e-11 43.8 0.4 1.1 1 0 0 1 1 1 1 Macro domain Sigma70_ner PF04546.13 ORF87328 - 0.52 10.2 3.5 0.61 9.9 3.5 1.0 1 0 0 1 1 1 0 Sigma-70, non-essential region KKLCAg1 PF15204.6 ORF86429 - 0.042 13.9 0.0 0.048 13.7 0.0 1.2 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 DAGK_cat PF00781.24 ORF85395 - 2.4e-08 33.6 0.0 2.5e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Herpes_UL82_83 PF05784.11 ORF85287 - 0.22 10.3 0.2 0.24 10.2 0.2 1.1 1 0 0 1 1 1 0 Betaherpesvirus UL82/83 protein N terminus Keratin_matx PF04579.12 ORF85032 - 0.061 13.7 0.0 0.072 13.4 0.0 1.0 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein HalOD2 PF18547.1 ORF84575 - 0.066 13.1 0.4 0.13 12.2 0.4 1.5 1 0 0 1 1 1 0 Halobacterial output domain 2 DUF1548 PF07579.11 ORF84300 - 0.059 13.7 0.1 0.068 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) MGC-24 PF05283.11 ORF84261 - 0.33 11.4 7.0 0.34 11.4 7.0 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Mucin PF01456.17 ORF84261 - 1.7 8.6 24.7 2 8.4 24.7 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein SPESP1 PF15754.5 ORF84261 - 3.7 6.6 8.0 4.4 6.4 8.0 1.0 1 0 0 1 1 1 0 Sperm equatorial segment protein 1 HEPN_AbiU2 PF18734.1 ORF84169 - 0.019 14.5 0.6 0.02 14.4 0.6 1.0 1 0 0 1 1 1 0 AbiU2 NosD PF05048.13 ORF8384 - 9.1e-06 25.1 2.7 9.7e-06 25.0 2.7 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 ORF8384 - 0.00016 21.5 5.1 0.015 15.1 0.9 1.7 1 1 1 2 2 2 2 Right handed beta helix region Ubie_methyltran PF01209.18 ORF8383 - 9.6e-28 97.1 0.1 1e-27 97.0 0.1 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family SCP2 PF02036.17 ORF83347 - 1.9e-06 28.3 0.0 3.3e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 SCP-2 sterol transfer family DUF903 PF06004.12 ORF83323 - 0.047 13.6 2.0 0.047 13.6 2.0 2.2 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF903) DUF1796 PF08795.10 ORF83323 - 0.057 13.4 0.3 0.062 13.3 0.3 1.0 1 0 0 1 1 1 0 Putative papain-like cysteine peptidase (DUF1796) DUF3332 PF11810.8 ORF83323 - 0.06 13.0 0.7 0.064 12.9 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DUF2554 PF10829.8 ORF83010 - 4.7e-53 177.5 0.8 5.2e-53 177.4 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2554) HupE_UreJ PF04955.12 ORF8261 - 0.034 13.6 1.5 0.036 13.6 1.5 1.0 1 0 0 1 1 1 0 HupE / UreJ protein Phytochelatin PF05023.14 ORF82293 - 9.7e-24 83.8 0.0 1.1e-23 83.6 0.0 1.0 1 0 0 1 1 1 1 Phytochelatin synthase RNA_helicase PF00910.22 ORF81039 - 0.026 14.9 0.2 0.12 12.8 0.0 1.8 1 1 1 2 2 2 0 RNA helicase YgaB PF14182.6 ORF80422 - 0.0093 16.3 0.6 0.01 16.2 0.6 1.1 1 0 0 1 1 1 1 YgaB-like protein Read-through PF16814.5 ORF80221 - 0.034 13.9 0.1 0.037 13.8 0.1 1.0 1 0 0 1 1 1 0 Read-through domain DUF5082 PF16888.5 ORF79969 - 0.024 14.9 2.0 0.029 14.7 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) DUF1548 PF07579.11 ORF79845 - 0.059 13.7 0.1 0.068 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) Utp21 PF04192.12 ORF79740 - 0.0065 16.0 0.3 0.0071 15.9 0.3 1.0 1 0 0 1 1 1 1 Utp21 specific WD40 associated putative domain Tantalus PF15386.6 ORF79693 - 0.069 13.3 1.6 2 8.6 0.0 2.5 2 1 0 2 2 2 0 Drosophila Tantalus-like zf-C2H2_4 PF13894.6 ORF7912 - 0.0027 18.4 0.3 0.004 17.9 0.3 1.2 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF7912 - 0.011 16.2 0.2 0.014 15.8 0.2 1.2 1 0 0 1 1 1 0 Zinc finger, C2H2 type Rad50_zn_hook PF04423.14 ORF7912 - 0.041 13.7 0.0 0.066 13.1 0.0 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif Zn-C2H2_12 PF18112.1 ORF7912 - 0.05 14.1 3.9 0.12 12.9 3.9 1.6 1 1 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain zf-Di19 PF05605.12 ORF7912 - 0.06 13.6 0.3 0.079 13.3 0.3 1.2 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_3 PF13878.6 ORF7912 - 0.064 13.1 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO zf-FPG_IleRS PF06827.14 ORF7912 - 0.09 12.7 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS zf-C2H2_9 PF16293.5 ORF7912 - 0.13 12.2 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) zf-met PF12874.7 ORF7912 - 0.19 12.1 0.1 0.29 11.6 0.1 1.3 1 0 0 1 1 1 0 Zinc-finger of C2H2 type Ank_2 PF12796.7 ORF7903 - 2.5e-14 53.6 0.4 1e-11 45.3 0.1 1.9 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF7903 - 2e-12 47.1 2.0 2.3e-08 34.1 0.6 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF7903 - 6.9e-11 42.5 0.5 7.3e-05 23.2 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF7903 - 3.2e-09 36.8 2.4 0.008 16.6 0.2 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF7903 - 5.3e-08 32.5 0.1 0.002 18.5 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat RRM_2 PF04059.12 ORF78859 - 1.5e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 cNMP_binding PF00027.29 ORF7854 - 2.9e-11 43.3 0.0 3.3e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain TetR_C_11 PF16859.5 ORF77257 - 0.021 15.1 0.1 0.038 14.3 0.1 1.5 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TetR_C_21 PF17926.1 ORF77257 - 0.046 13.9 0.0 0.048 13.8 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_26 PF17934.1 ORF77257 - 0.07 13.5 0.0 0.073 13.4 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain RcsF PF16358.5 ORF77202 - 0.018 15.1 0.1 0.02 15.0 0.1 1.1 1 0 0 1 1 1 0 RcsF lipoprotein HTH_46 PF15977.5 ORF76995 - 0.032 14.2 0.2 1.3 9.1 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA binding SUKH_6 PF14568.6 ORF76666 - 0.026 15.0 0.1 0.038 14.4 0.1 1.3 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall DUF2615 PF11027.8 ORF75876 - 0.074 13.2 0.0 0.1 12.7 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) Lambda_CIII PF02061.16 ORF75589 - 0.4 10.8 2.7 0.25 11.4 0.5 1.7 1 1 1 2 2 2 0 Lambda Phage CIII WVELL PF14043.6 ORF75390 - 0.16 11.8 2.2 0.52 10.2 0.2 2.1 1 1 1 2 2 2 0 WVELL protein MHC_I_C PF06623.11 ORF75235 - 0.11 12.4 0.4 0.29 11.1 0.4 1.7 1 0 0 1 1 1 0 MHC_I C-terminus PrsW-protease PF13367.6 ORF75023 - 0.043 13.3 0.0 0.049 13.1 0.0 1.0 1 0 0 1 1 1 0 PrsW family intramembrane metalloprotease Pox_TAA1 PF03295.14 ORF74889 - 0.2 11.6 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Poxvirus trans-activator protein A1 C-terminal FeoB_associated PF12669.7 ORF74671 - 0.073 13.5 1.2 0.1 13.0 1.2 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein P5CR_dimer PF14748.6 ORF74417 - 0.16 12.2 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Pyrroline-5-carboxylate reductase dimerisation UPF0139 PF03669.13 ORF74026 - 1.1e-11 44.4 0.8 1.3e-11 44.2 0.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0139) Wzy_C PF04932.15 ORF74026 - 0.075 12.7 1.0 0.076 12.6 1.0 1.0 1 0 0 1 1 1 0 O-Antigen ligase ALS2CR8 PF15299.6 ORF73719 - 0.005 16.7 0.0 0.0052 16.7 0.0 1.1 1 0 0 1 1 1 1 Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 UDPGP PF01704.18 ORF72747 - 0.21 10.2 0.7 0.22 10.1 0.7 1.0 1 0 0 1 1 1 0 UTP--glucose-1-phosphate uridylyltransferase Tmemb_18A PF09771.9 ORF72524 - 0.078 13.4 0.1 0.092 13.1 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 188 Tantalus PF15386.6 ORF72357 - 0.069 13.3 1.6 2 8.6 0.0 2.5 2 1 0 2 2 2 0 Drosophila Tantalus-like WD40_alt PF14077.6 ORF72190 - 0.011 15.6 0.0 0.019 14.8 0.0 1.5 1 0 0 1 1 1 0 Alternative WD40 repeat motif Fib_alpha PF08702.10 ORF71887 - 0.071 13.3 0.9 0.08 13.1 0.9 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4773 PF15998.5 ORF71795 - 0.048 14.2 0.0 0.059 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4773) Dicer_dimer PF03368.14 ORF71473 - 0.0088 16.2 0.0 0.0094 16.1 0.0 1.1 1 0 0 1 1 1 1 Dicer dimerisation domain EF-hand_9 PF14658.6 ORF71473 - 0.1 12.9 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain Thiolase_N PF00108.23 ORF71322 - 4.4e-18 65.6 0.1 4.8e-18 65.5 0.1 1.0 1 0 0 1 1 1 1 Thiolase, N-terminal domain Macro PF01661.21 ORF71259 - 2e-11 43.9 0.4 2.3e-11 43.8 0.4 1.1 1 0 0 1 1 1 1 Macro domain DUF2290 PF10053.9 ORF70754 - 0.006 16.1 0.0 0.006 16.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2290) DUF1653 PF07866.11 ORF70052 - 0.03 14.6 0.2 0.037 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1653) Vpu PF00558.19 ORF70052 - 0.086 12.6 0.1 0.089 12.6 0.1 1.1 1 0 0 1 1 1 0 Vpu protein DUF4536 PF15055.6 ORF69971 - 0.061 13.6 1.7 0.15 12.3 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4536) Pkinase PF00069.25 ORF69631 - 1.5e-27 96.6 0.0 1.6e-27 96.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF69631 - 2.2e-16 60.0 0.0 2.3e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF69631 - 2.1e-06 26.8 0.0 2.3e-06 26.6 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF69631 - 0.002 18.1 0.0 0.0021 18.1 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF69631 - 0.075 12.3 0.0 0.089 12.1 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Dodecin PF07311.12 ORF69459 - 0.039 14.2 0.0 0.057 13.7 0.0 1.2 1 0 0 1 1 1 0 Dodecin TGF_beta_GS PF08515.12 ORF69126 - 0.14 11.7 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Transforming growth factor beta type I GS-motif Carboxyl_trans PF01039.22 ORF6910 - 0.033 12.8 0.0 0.036 12.7 0.0 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain zf-C2H2_10 PF16588.5 ORF6890 - 0.053 13.3 1.6 0.053 13.3 1.6 1.9 2 0 0 2 2 2 0 C2H2 zinc-finger DUF1604 PF07713.13 ORF67717 - 0.0084 15.9 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1604) MVL PF12151.8 ORF67540 - 0.31 10.9 2.5 0.46 10.4 0.6 2.3 3 0 0 3 3 3 0 Mannan-binding protein Neprosin PF03080.15 ORF67327 - 0.17 11.2 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Neprosin vWF_A PF12450.8 ORF67327 - 0.19 11.7 0.2 0.23 11.4 0.2 1.1 1 0 0 1 1 1 0 von Willebrand factor Dicer_dimer PF03368.14 ORF6721 - 0.0088 16.2 0.0 0.0094 16.1 0.0 1.1 1 0 0 1 1 1 1 Dicer dimerisation domain EF-hand_9 PF14658.6 ORF6721 - 0.1 12.9 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain DUF2157 PF09925.9 ORF67064 - 0.13 12.0 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Pox_A9 PF04835.12 ORF67064 - 0.25 11.5 3.1 0.94 9.7 3.1 1.9 1 1 0 1 1 1 0 A9 protein conserved region DUF35_N PF12172.8 ORF66842 - 0.14 12.0 7.5 0.19 11.6 0.2 2.9 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Actin PF00022.19 ORF66305 - 3.3e-17 62.2 0.0 3.4e-17 62.2 0.0 1.0 1 0 0 1 1 1 1 Actin Pescadillo_N PF06732.11 ORF66193 - 1.4e-26 93.7 1.3 1.5e-26 93.5 1.3 1.0 1 0 0 1 1 1 1 Pescadillo N-terminus NAD_binding_10 PF13460.6 ORF65831 - 0.0011 18.9 0.0 0.0011 18.8 0.0 1.0 1 0 0 1 1 1 1 NAD(P)H-binding DctQ PF04290.12 ORF6573 - 0.24 11.3 5.3 1.8 8.5 0.2 2.0 1 1 1 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component LGT PF01790.18 ORF65604 - 0.067 12.4 0.0 0.067 12.4 0.0 1.1 1 0 0 1 1 1 0 Prolipoprotein diacylglyceryl transferase Herpes_US9 PF06072.11 ORF64622 - 0.14 12.0 0.7 0.22 11.4 0.7 1.3 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 TrkA_TMD PF18613.1 ORF64242 - 1.3 8.6 7.0 1.9 8.0 7.0 1.2 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain DUF1168 PF06658.12 ORF64136 - 0.32 10.8 1.4 0.41 10.5 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Dicer_dimer PF03368.14 ORF64116 - 0.0088 16.2 0.0 0.0094 16.1 0.0 1.1 1 0 0 1 1 1 1 Dicer dimerisation domain EF-hand_9 PF14658.6 ORF64116 - 0.1 12.9 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain TMIE PF16038.5 ORF63472 - 0.0011 18.7 0.3 0.0013 18.6 0.3 1.1 1 0 0 1 1 1 1 TMIE protein Pkinase PF00069.25 ORF63415 - 3.7e-11 42.9 0.1 4.2e-11 42.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63415 - 6.4e-06 25.6 0.1 6.8e-06 25.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2512 PF10710.9 ORF63280 - 0.018 14.7 1.2 0.02 14.6 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2512) BatA PF07584.11 ORF63280 - 0.1 13.0 0.0 0.16 12.3 0.0 1.3 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal Rep_fac-A_3 PF08661.11 ORF63279 - 0.11 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Replication factor A protein 3 MORN PF02493.20 ORF63150 - 3.4e-15 54.9 5.8 4.3e-08 32.6 0.3 2.8 3 0 0 3 3 3 2 MORN repeat PATR PF12951.7 ORF63150 - 0.023 14.8 0.0 0.05 13.7 0.0 1.6 1 0 0 1 1 1 0 Passenger-associated-transport-repeat DUF5357 PF17310.2 ORF62917 - 0.043 12.4 0.2 0.044 12.3 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) HD-ZIP_N PF04618.12 ORF62656 - 0.018 15.6 0.8 0.018 15.5 0.8 1.0 1 0 0 1 1 1 0 HD-ZIP protein N terminus DUF35_N PF12172.8 ORF62584 - 0.14 12.0 7.5 0.19 11.6 0.2 2.9 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Herpes_U15 PF05613.11 ORF62524 - 0.0052 17.5 2.6 0.0065 17.2 2.6 1.2 1 0 0 1 1 1 1 Human herpesvirus U15 protein Pkinase PF00069.25 ORF62469 - 3.7e-11 42.9 0.1 4.2e-11 42.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62469 - 6.4e-06 25.6 0.1 6.8e-06 25.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase REV PF00424.18 ORF61998 - 0.0047 16.9 0.1 0.0056 16.7 0.1 1.1 1 0 0 1 1 1 1 REV protein (anti-repression trans-activator protein) Alba PF01918.21 ORF61064 - 0.001 18.9 1.5 0.0015 18.3 1.5 1.4 1 1 0 1 1 1 1 Alba Pro_racemase PF05544.11 ORF61064 - 0.028 13.5 0.7 0.03 13.4 0.7 1.0 1 0 0 1 1 1 0 Proline racemase EspF PF04806.12 ORF60796 - 0.024 15.1 1.4 0.04 14.3 1.4 1.4 1 0 0 1 1 1 0 EspF protein repeat DUF2671 PF10877.8 ORF60259 - 0.11 12.3 0.1 0.63 9.9 0.0 2.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2671) Fib_alpha PF08702.10 ORF60000 - 0.071 13.3 0.9 0.08 13.1 0.9 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Kelch_6 PF13964.6 ORF59822 - 0.00091 19.4 0.5 0.0017 18.6 0.2 1.6 2 0 0 2 2 2 1 Kelch motif Kelch_1 PF01344.25 ORF59822 - 0.12 12.0 0.6 0.12 12.0 0.6 2.2 2 1 0 2 2 2 0 Kelch motif PIG-P PF08510.12 ORF59602 - 0.11 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 PIG-P UT PF03253.14 ORF59424 - 0.026 13.7 1.0 0.03 13.4 1.0 1.1 1 0 0 1 1 1 0 Urea transporter RRM_2 PF04059.12 ORF58980 - 1.5e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 DUF1403 PF07183.11 ORF58877 - 0.016 14.8 0.2 0.022 14.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1403) SecD-TM1 PF13721.6 ORF58793 - 0.1 13.1 0.2 0.11 12.9 0.2 1.1 1 0 0 1 1 1 0 SecD export protein N-terminal TM region ScdA_N PF04405.14 ORF58775 - 0.055 13.1 0.5 0.25 11.0 0.0 1.9 2 0 0 2 2 2 0 Domain of Unknown function (DUF542) Glyco_hydro_85 PF03644.13 ORF58541 - 0.055 12.9 1.0 0.054 12.9 1.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 85 DUF2197 PF09963.9 ORF58340 - 0.13 12.5 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) c-SKI_SMAD_bind PF08782.10 ORF57831 - 0.037 14.2 0.9 0.052 13.8 0.9 1.2 1 0 0 1 1 1 0 c-SKI Smad4 binding domain FixQ PF05545.11 ORF57380 - 0.032 14.2 1.9 0.058 13.4 0.2 2.1 2 1 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ Caveolin PF01146.17 ORF57380 - 1.3 8.9 6.3 1.6 8.7 6.3 1.1 1 0 0 1 1 1 0 Caveolin Gly_acyl_tr_C PF08444.10 ORF57261 - 0.12 12.6 0.7 0.14 12.4 0.7 1.1 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region S1 PF00575.23 ORF57235 - 2.6e-13 50.1 0.8 2.8e-13 50.0 0.8 1.0 1 0 0 1 1 1 1 S1 RNA binding domain DUF3989 PF13150.6 ORF56720 - 0.21 11.4 0.2 0.41 10.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) UPF0154 PF03672.13 ORF56692 - 0.11 12.5 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) tRNA_int_endo PF01974.17 ORF56532 - 0.05 13.7 0.0 0.053 13.6 0.0 1.1 1 0 0 1 1 1 0 tRNA intron endonuclease, catalytic C-terminal domain Golgin_A5 PF09787.9 ORF56513 - 0.018 14.5 1.6 0.019 14.4 1.6 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 UPF0167 PF03691.14 ORF56513 - 0.048 13.5 0.3 0.056 13.2 0.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0167) M60-like_N PF17291.2 ORF56513 - 0.13 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 N-terminal domain of M60-like peptidases DctQ PF04290.12 ORF55889 - 0.24 11.3 5.3 1.8 8.5 0.2 2.0 1 1 1 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component ASTN_2_hairpin PF18577.1 ORF55728 - 0.071 13.2 0.9 0.071 13.2 0.9 1.9 2 0 0 2 2 2 0 Astrotactin-2 C-terminal beta-hairpin domain PROCN PF08083.11 ORF5562 - 0.19 10.4 0.0 0.22 10.2 0.0 1.0 1 0 0 1 1 1 0 PROCN (NUC071) domain EVE PF01878.18 ORF55570 - 0.068 13.2 0.2 0.086 12.8 0.2 1.1 1 0 0 1 1 1 0 EVE domain PfkB PF00294.24 ORF55368 - 2.7e-15 56.5 0.0 2.7e-15 56.5 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase ParcG PF10274.9 ORF55061 - 2.7e-29 102.6 0.1 3e-29 102.4 0.1 1.0 1 0 0 1 1 1 1 Parkin co-regulated protein PDEase_I PF00233.19 ORF54970 - 6.8e-12 45.6 3.2 7.3e-12 45.5 3.2 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase HTH_ABP1_N PF18107.1 ORF54970 - 0.0094 15.6 0.1 0.018 14.8 0.1 1.5 1 0 0 1 1 1 1 Fission yeast centromere protein N-terminal domain SRI PF08236.11 ORF54970 - 0.017 15.3 0.6 0.019 15.1 0.6 1.4 1 1 0 1 1 1 0 SRI (Set2 Rpb1 interacting) domain DUF1126 PF06565.12 ORF54889 - 3.4e-05 23.6 0.1 4.1e-05 23.3 0.1 1.2 1 0 0 1 1 1 1 DUF1126 PH-like domain Seadorna_VP7 PF07387.11 ORF54889 - 0.00073 18.7 0.1 0.00073 18.7 0.1 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 eIF-5_eIF-2B PF01873.17 ORF54364 - 1.2e-12 47.8 0.0 1.3e-12 47.6 0.0 1.0 1 0 0 1 1 1 1 Domain found in IF2B/IF5 IF2_N PF04760.15 ORF54364 - 0.035 13.9 0.0 0.055 13.3 0.0 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region START PF01852.19 ORF54225 - 3.3e-10 39.7 0.0 3.9e-10 39.5 0.0 1.0 1 0 0 1 1 1 1 START domain Sec63 PF02889.16 ORF54216 - 0.094 11.9 0.0 0.094 11.9 0.0 1.1 1 0 0 1 1 1 0 Sec63 Brl domain MitoNEET_N PF10660.9 ORF53857 - 7.1 6.7 8.0 6.8 6.8 1.5 2.2 1 1 1 2 2 2 0 Iron-containing outer mitochondrial membrane protein N-terminus KdpC PF02669.15 ORF53428 - 0.13 12.1 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 K+-transporting ATPase, c chain PAD_M PF08527.10 ORF52920 - 0.12 12.0 0.1 0.14 11.8 0.1 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain TBCC PF07986.12 ORF52610 - 0.025 14.3 0.6 0.03 14.0 0.6 1.2 1 0 0 1 1 1 0 Tubulin binding cofactor C Carboxyl_trans PF01039.22 ORF5260 - 0.033 12.8 0.0 0.036 12.7 0.0 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain dDENN PF03455.19 ORF52369 - 0.0015 18.5 0.8 0.0028 17.6 0.4 1.6 2 0 0 2 2 2 1 dDENN domain DUF3332 PF11810.8 ORF5180 - 5.8 6.5 6.0 7.1 6.2 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) Phospholamban PF04272.14 ORF5180 - 8 6.0 11.7 9.9 5.7 7.3 2.2 2 0 0 2 2 2 0 Phospholamban AIM3 PF17096.5 ORF51342 - 0.001 20.0 3.3 0.085 13.8 1.1 2.1 1 1 1 2 2 2 2 Altered inheritance of mitochondria protein 3 PSII PF00421.19 ORF51342 - 0.029 13.1 0.1 0.029 13.1 0.1 1.1 1 0 0 1 1 1 0 Photosystem II protein Stc1 PF12898.7 ORF50988 - 0.05 14.1 0.0 0.074 13.6 0.0 1.3 1 0 0 1 1 1 0 Stc1 domain AAL_decarboxy PF03306.13 ORF50150 - 0.023 14.0 0.5 0.024 14.0 0.5 1.0 1 0 0 1 1 1 0 Alpha-acetolactate decarboxylase Cas6b_C PF17262.2 ORF50150 - 0.047 13.8 0.4 0.051 13.7 0.4 1.0 1 0 0 1 1 1 0 Cas6b C-terminal domain Terminase_2 PF03592.16 ORF50131 - 0.012 16.1 0.1 0.015 15.8 0.1 1.2 1 0 0 1 1 1 0 Terminase small subunit HEPN_AbiU2 PF18734.1 ORF49868 - 0.019 14.5 0.6 0.02 14.4 0.6 1.0 1 0 0 1 1 1 0 AbiU2 RCC1_2 PF13540.6 ORF49718 - 2.3e-05 24.1 1.6 0.034 14.0 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF49718 - 0.022 14.8 0.1 5.2 7.1 0.0 2.0 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PLN_propep PF16485.5 ORF49718 - 0.048 13.4 0.1 0.072 12.8 0.1 1.2 1 0 0 1 1 1 0 Protealysin propeptide RCC1 PF00415.18 ORF49718 - 3.1 8.5 5.8 9.8 6.9 0.6 2.9 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat p450 PF00067.22 ORF49448 - 2.3e-12 46.4 0.0 2.4e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF35_N PF12172.8 ORF49191 - 0.14 12.0 7.5 0.19 11.6 0.2 2.9 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) CLN3 PF02487.17 ORF48931 - 4.9e-10 39.0 3.2 5.4e-10 38.9 3.2 1.0 1 0 0 1 1 1 1 CLN3 protein L6_membrane PF05805.12 ORF48931 - 0.037 13.6 0.9 0.039 13.5 0.9 1.0 1 0 0 1 1 1 0 L6 membrane protein BTK PF00779.19 ORF48540 - 1.9 8.4 7.6 5.1 7.0 0.1 3.4 4 0 0 4 4 4 0 BTK motif Macro PF01661.21 ORF48443 - 2e-11 43.9 0.4 2.3e-11 43.8 0.4 1.1 1 0 0 1 1 1 1 Macro domain Baculo_helicase PF04735.12 ORF48379 - 0.017 12.7 0.9 0.019 12.5 0.9 1.0 1 0 0 1 1 1 0 Baculovirus DNA helicase AnfO_nitrog PF09582.10 ORF48379 - 0.043 13.2 0.1 0.048 13.0 0.1 1.0 1 0 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) Carb_anhydrase PF00194.21 ORF48336 - 5.1e-05 22.9 0.1 5.7e-05 22.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Vut_1 PF02592.15 ORF48281 - 0.027 14.8 2.8 0.032 14.5 2.8 1.0 1 0 0 1 1 1 0 Putative vitamin uptake transporter GET2 PF08690.10 ORF48281 - 0.46 10.1 2.4 0.51 10.0 2.4 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 Stc1 PF12898.7 ORF48192 - 0.05 14.1 0.0 0.074 13.6 0.0 1.3 1 0 0 1 1 1 0 Stc1 domain Phosphoprotein PF00922.17 ORF47992 - 0.027 14.1 0.0 0.028 14.0 0.0 1.0 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein FANCI_HD1 PF14679.6 ORF47494 - 0.091 12.7 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 FANCI helical domain 1 DUF2470 PF10615.9 ORF47355 - 4.5e-08 33.6 0.0 5.8e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2470) FGAR-AT_linker PF18072.1 ORF47353 - 0.021 15.4 0.0 0.045 14.3 0.0 1.6 1 1 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase linker domain AbfS_sensor PF18225.1 ORF47094 - 0.024 14.5 0.0 0.039 13.9 0.0 1.2 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain MORN PF02493.20 ORF47051 - 3.5e-14 51.8 26.4 1.3e-07 31.1 2.6 4.1 4 0 0 4 4 4 4 MORN repeat Pkinase PF00069.25 ORF46805 - 6.4e-18 65.1 0.1 6.8e-18 65.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46805 - 9.6e-13 48.0 0.0 1e-12 47.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF46805 - 0.012 14.5 0.1 0.012 14.4 0.1 1.0 1 0 0 1 1 1 0 Fungal protein kinase Kdo PF06293.14 ORF46805 - 0.047 13.1 0.0 0.047 13.1 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF46805 - 0.05 13.2 0.0 0.054 13.1 0.0 1.0 1 0 0 1 1 1 0 RIO1 family YrbL-PhoP_reg PF10707.9 ORF46805 - 0.12 11.9 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Ter PF05472.11 ORF46678 - 0.092 11.8 0.0 0.093 11.8 0.0 1.0 1 0 0 1 1 1 0 DNA replication terminus site-binding protein (Ter protein) TetR_C_36 PF18598.1 ORF45872 - 0.042 13.8 0.2 0.047 13.6 0.2 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain UBA_4 PF14555.6 ORF45872 - 0.06 13.2 0.0 0.13 12.1 0.0 1.5 2 0 0 2 2 2 0 UBA-like domain BRCT PF00533.26 ORF45872 - 0.069 13.5 0.0 0.082 13.3 0.0 1.1 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 ORF45872 - 0.15 12.5 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 BRCT domain, a BRCA1 C-terminus domain DUF2157 PF09925.9 ORF45272 - 0.13 12.0 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Pox_A9 PF04835.12 ORF45272 - 0.25 11.5 3.1 0.94 9.7 3.1 1.9 1 1 0 1 1 1 0 A9 protein conserved region DUF515 PF04415.12 ORF44480 - 0.21 10.0 6.8 0.22 9.9 6.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) ssDBP PF17878.1 ORF44362 - 0.17 12.1 1.2 0.24 11.7 1.2 1.2 1 0 0 1 1 1 0 Single-stranded DNA-binding protein DUF5071 PF16804.5 ORF4429 - 0.084 13.1 0.0 0.087 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5071) Herpes_UL82_83 PF05784.11 ORF44274 - 0.22 10.3 0.2 0.24 10.2 0.2 1.1 1 0 0 1 1 1 0 Betaherpesvirus UL82/83 protein N terminus Aa_trans PF01490.18 ORF43570 - 1.9e-10 40.1 0.4 2.1e-10 39.9 0.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein tRNA-synt_2_TM PF16995.5 ORF43570 - 0.0041 16.9 0.3 0.0046 16.7 0.3 1.0 1 0 0 1 1 1 1 Transmembrane region of lysyl-tRNA synthetase Peptidase_C7 PF01830.18 ORF4348 - 0.066 12.6 0.1 0.07 12.5 0.1 1.1 1 0 0 1 1 1 0 Peptidase C7 family cobW PF02492.19 ORF42749 - 1.5e-12 47.4 0.0 1.7e-12 47.3 0.0 1.0 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Viral_helicase1 PF01443.18 ORF42749 - 0.00011 22.0 0.0 0.00016 21.5 0.0 1.4 1 1 0 1 1 1 1 Viral (Superfamily 1) RNA helicase SRPRB PF09439.10 ORF42749 - 0.00053 19.5 0.1 0.00059 19.3 0.1 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF42749 - 0.00065 20.0 0.0 0.00065 20.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain TrwB_AAD_bind PF10412.9 ORF42749 - 0.0021 17.1 0.3 0.0023 16.9 0.3 1.1 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_33 PF13671.6 ORF42749 - 0.003 17.7 0.0 0.0031 17.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 ORF42749 - 0.0037 17.3 0.0 0.0041 17.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 ORF42749 - 0.0038 17.2 0.1 0.0039 17.2 0.1 1.2 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE MobB PF03205.14 ORF42749 - 0.0059 16.5 0.0 0.0069 16.3 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B Zeta_toxin PF06414.12 ORF42749 - 0.0075 15.6 0.0 0.0083 15.4 0.0 1.1 1 0 0 1 1 1 1 Zeta toxin SRP54 PF00448.22 ORF42749 - 0.013 15.1 0.5 0.16 11.6 0.5 1.9 1 1 1 2 2 2 0 SRP54-type protein, GTPase domain AAA_29 PF13555.6 ORF42749 - 0.017 14.8 0.1 0.022 14.5 0.1 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 ORF42749 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF2791 PF10923.8 ORF42749 - 0.02 13.8 0.0 0.02 13.8 0.0 1.0 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) RsgA_GTPase PF03193.16 ORF42749 - 0.02 14.8 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 ORF42749 - 0.024 15.0 0.0 0.024 15.0 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 ORF42749 - 0.026 14.3 0.1 0.026 14.3 0.1 1.1 1 0 0 1 1 1 0 AAA domain dNK PF01712.19 ORF42749 - 0.026 14.4 0.0 0.03 14.2 0.0 1.1 1 0 0 1 1 1 0 Deoxynucleoside kinase ATP_bind_1 PF03029.17 ORF42749 - 0.029 14.1 0.0 0.033 14.0 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Roc PF08477.13 ORF42749 - 0.03 14.5 0.0 0.035 14.3 0.0 1.1 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase ATPase_2 PF01637.18 ORF42749 - 0.042 13.8 0.0 0.042 13.8 0.0 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_7 PF12775.7 ORF42749 - 0.053 13.0 0.1 0.06 12.9 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF42749 - 0.055 14.0 0.0 0.059 13.9 0.0 1.2 1 0 0 1 1 1 0 ABC transporter DnaB_C PF03796.15 ORF42749 - 0.059 12.7 0.1 0.061 12.6 0.1 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain AAA_19 PF13245.6 ORF42749 - 0.06 13.7 0.1 0.067 13.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF42749 - 0.066 12.2 0.0 0.069 12.1 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_11 PF13086.6 ORF42749 - 0.12 12.2 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF42749 - 0.12 12.2 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 NACHT domain FtsK_SpoIIIE PF01580.18 ORF42749 - 0.13 11.6 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family MMR_HSR1 PF01926.23 ORF42749 - 0.14 12.2 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF1201 PF06716.11 ORF4225 - 2.2 8.4 12.7 3.8 7.6 0.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1201) DUF4964 PF16334.5 ORF42056 - 0.086 12.4 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4964) DUF3969 PF13108.6 ORF41565 - 0.026 14.6 0.0 0.035 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3969) DUF35_N PF12172.8 ORF41179 - 0.14 12.0 7.5 0.19 11.6 0.2 2.9 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF2070 PF09843.9 ORF41039 - 2.9 6.1 7.1 2.9 6.1 7.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) GAPT PF11770.8 ORF40750 - 0.054 13.3 0.8 0.059 13.2 0.8 1.2 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) DUF1068 PF06364.12 ORF40441 - 7.6 6.4 11.7 16 5.3 11.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1068) MORN PF02493.20 ORF40354 - 1.1e-16 59.6 20.8 9.5e-07 28.4 0.9 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF40354 - 0.023 14.3 0.9 3.2 7.5 0.2 2.3 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain YafQ_toxin PF15738.5 ORF4026 - 0.019 15.3 0.2 0.025 14.9 0.2 1.3 1 1 0 1 1 1 0 Bacterial toxin of type II toxin-antitoxin system, YafQ F-box-like PF12937.7 ORF40129 - 0.00023 21.0 0.0 0.00037 20.3 0.0 1.3 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 ORF40129 - 0.11 12.5 0.1 0.28 11.1 0.0 1.6 2 0 0 2 2 2 0 F-box domain Dynactin_p62 PF05502.13 ORF39838 - 0.036 12.9 0.4 0.034 12.9 0.4 1.0 1 0 0 1 1 1 0 Dynactin p62 family Fcf1 PF04900.12 ORF3967 - 0.0042 17.5 0.1 0.0081 16.5 0.1 1.5 1 0 0 1 1 1 1 Fcf1 Phage_ABA_S PF18066.1 ORF39602 - 0.066 13.9 0.0 0.078 13.7 0.0 1.1 1 0 0 1 1 1 0 Phage ABA sandwich domain RseA_C PF03873.13 ORF39451 - 1.7e-19 69.8 4.5 1.7e-19 69.8 4.5 1.9 2 0 0 2 2 2 1 Anti sigma-E protein RseA, C-terminal domain Suppressor_APC PF11414.8 ORF39451 - 0.043 13.9 5.7 0.054 13.6 5.7 1.1 1 0 0 1 1 1 0 Adenomatous polyposis coli tumour suppressor protein Nitrate_red_gam PF02665.14 ORF39326 - 0.059 12.9 1.8 0.067 12.7 1.8 1.0 1 0 0 1 1 1 0 Nitrate reductase gamma subunit DUF2001 PF09393.10 ORF39237 - 0.06 13.3 0.0 0.066 13.2 0.0 1.2 1 1 0 1 1 1 0 Phage tail tube protein DUF5072 PF16807.5 ORF39237 - 0.095 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5072) zf-C2H2_4 PF13894.6 ORF3905 - 0.0027 18.4 0.3 0.004 17.9 0.3 1.2 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF3905 - 0.011 16.2 0.2 0.014 15.8 0.2 1.2 1 0 0 1 1 1 0 Zinc finger, C2H2 type Rad50_zn_hook PF04423.14 ORF3905 - 0.041 13.7 0.0 0.066 13.1 0.0 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif Zn-C2H2_12 PF18112.1 ORF3905 - 0.05 14.1 3.9 0.12 12.9 3.9 1.6 1 1 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain zf-Di19 PF05605.12 ORF3905 - 0.06 13.6 0.3 0.079 13.3 0.3 1.2 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_3 PF13878.6 ORF3905 - 0.064 13.1 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO zf-FPG_IleRS PF06827.14 ORF3905 - 0.09 12.7 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS zf-C2H2_9 PF16293.5 ORF3905 - 0.13 12.2 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) zf-met PF12874.7 ORF3905 - 0.19 12.1 0.1 0.29 11.6 0.1 1.3 1 0 0 1 1 1 0 Zinc-finger of C2H2 type OAF PF14941.6 ORF39030 - 0.023 14.1 0.1 0.023 14.1 0.1 1.1 1 0 0 1 1 1 0 Transcriptional regulator, Out at first FCD PF07729.12 ORF38788 - 0.088 13.2 0.0 0.098 13.1 0.0 1.1 1 0 0 1 1 1 0 FCD domain ERGIC_N PF13850.6 ORF38155 - 0.083 13.2 0.2 0.11 12.9 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) COMMD1_N PF17221.3 ORF3747 - 0.0025 18.1 0.4 0.0027 18.0 0.4 1.1 1 0 0 1 1 1 1 COMMD1 N-terminal domain ZapB PF06005.12 ORF3747 - 0.033 14.6 0.6 0.033 14.6 0.6 1.4 2 0 0 2 2 2 0 Cell division protein ZapB DUF4122 PF13498.6 ORF3702 - 0.032 13.9 0.1 0.033 13.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4122) HisK_N PF09385.10 ORF3702 - 0.043 13.8 0.1 0.048 13.6 0.1 1.3 1 0 0 1 1 1 0 Histidine kinase N terminal DUF4668 PF15701.5 ORF3668 - 0.062 13.1 0.7 0.069 13.0 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) PHD PF00628.29 ORF36648 - 0.021 14.7 0.1 0.021 14.7 0.1 1.7 2 0 0 2 2 2 0 PHD-finger Prok-RING_1 PF14446.6 ORF36648 - 0.022 14.7 0.6 0.043 13.7 0.6 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF282 PF03380.14 ORF36648 - 0.047 13.6 4.5 0.097 12.6 1.0 2.1 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF282 zf-RING_9 PF13901.6 ORF36648 - 0.068 13.1 0.3 0.068 13.1 0.3 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon PIF PF05092.12 ORF36267 - 0.24 10.1 0.0 0.26 10.0 0.0 1.0 1 0 0 1 1 1 0 Per os infectivity MORN PF02493.20 ORF36101 - 7.8e-15 53.8 3.6 5.1e-07 29.2 1.2 2.6 2 0 0 2 2 2 2 MORN repeat LCE6A PF15858.5 ORF35876 - 0.76 10.6 4.1 2.3 9.0 4.1 1.7 1 1 0 1 1 1 0 Late cornified envelope protein 6A family DUF35_N PF12172.8 ORF3526 - 0.14 12.0 7.5 0.19 11.6 0.2 2.9 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF4519 PF15012.6 ORF34826 - 0.077 13.2 3.6 0.077 13.2 3.6 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4519) MEKHLA PF08670.11 ORF34278 - 0.11 12.4 0.2 0.13 12.2 0.2 1.1 1 0 0 1 1 1 0 MEKHLA domain Fib_alpha PF08702.10 ORF34210 - 0.071 13.3 0.9 0.08 13.1 0.9 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Fer4_19 PF06902.11 ORF34024 - 6.3e-29 99.8 0.0 7.1e-29 99.7 0.0 1.0 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Condensin2nSMC PF12422.8 ORF33878 - 0.064 13.4 2.9 0.074 13.2 2.9 1.0 1 0 0 1 1 1 0 Condensin II non structural maintenance of chromosomes subunit Biotin_lipoyl PF00364.22 ORF33854 - 4.7e-12 45.6 0.5 5.3e-12 45.4 0.5 1.1 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 ORF33854 - 0.00019 21.2 0.0 0.0082 16.0 0.0 2.1 1 1 1 2 2 2 2 Biotin-lipoyl like DAGK_cat PF00781.24 ORF33358 - 2.4e-08 33.6 0.0 2.5e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks321.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks321.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks321.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks321.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:06 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF35_N PF12172.8 ORF33301 - 0.15 11.9 7.8 0.22 11.4 0.2 2.9 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) ASFV_360 PF01671.16 ORF32545 - 0.029 13.9 0.0 0.032 13.7 0.0 1.0 1 0 0 1 1 1 0 African swine fever virus multigene family 360 protein HECT PF00632.25 ORF32482 - 4.1e-11 42.9 0.0 4.4e-11 42.8 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) GLYCAM-1 PF05242.11 ORF31959 - 0.028 14.6 0.6 0.035 14.2 0.6 1.1 1 0 0 1 1 1 0 Glycosylation-dependent cell adhesion molecule 1 (GlyCAM-1) IMPa_helical PF18642.1 ORF31893 - 0.07 13.6 0.7 0.083 13.3 0.7 1.1 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain Golgin_A5 PF09787.9 ORF31341 - 0.018 14.5 1.6 0.019 14.4 1.6 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 UPF0167 PF03691.14 ORF31341 - 0.048 13.5 0.3 0.056 13.2 0.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0167) M60-like_N PF17291.2 ORF31341 - 0.13 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 N-terminal domain of M60-like peptidases FAM167 PF11652.8 ORF31283 - 0.013 16.0 0.7 0.016 15.6 0.7 1.3 1 1 0 1 1 1 0 FAM167 bPH_4 PF06713.11 ORF31283 - 0.038 14.1 0.2 0.047 13.8 0.2 1.2 1 0 0 1 1 1 0 Bacterial PH domain Arm-DNA-bind_2 PF12167.8 ORF31283 - 0.14 12.1 1.8 0.17 11.8 1.4 1.5 1 1 0 1 1 1 0 Arm DNA-binding domain Prok-RING_4 PF14447.6 ORF30632 - 0.033 14.1 0.3 0.046 13.6 0.3 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 RRM_2 PF04059.12 ORF30506 - 1.5e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 MORN PF02493.20 ORF29830 - 1.1e-16 59.6 20.8 9.5e-07 28.4 0.9 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF29830 - 0.023 14.3 0.9 3.2 7.5 0.2 2.3 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain DUF4131 PF13567.6 ORF29226 - 3.8 7.1 13.0 4.4 6.9 13.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Gene66 PF02053.15 ORF29204 - 0.19 11.3 0.2 0.25 10.9 0.2 1.2 1 0 0 1 1 1 0 Gene 66 (IR5) protein DUF2304 PF10066.9 ORF29032 - 0.015 15.5 3.3 0.018 15.3 3.3 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) PetN PF03742.14 ORF29032 - 1.2 9.0 5.7 2 8.4 3.3 2.1 2 0 0 2 2 2 0 PetN Transposase_20 PF02371.16 ORF29012 - 0.78 10.1 4.8 1.2 9.5 2.6 1.9 1 1 1 2 2 2 0 Transposase IS116/IS110/IS902 family Gly-rich_Ago1 PF12764.7 ORF28813 - 0.015 16.1 3.4 0.016 16.0 3.4 1.1 1 0 0 1 1 1 0 Glycine-rich region of argonaut Tfb2_C PF18307.1 ORF28551 - 0.0056 17.1 0.4 0.046 14.1 0.1 1.9 1 1 1 2 2 2 1 Transcription factor Tfb2 (p52) C-terminal domain Kelch_6 PF13964.6 ORF28501 - 0.00091 19.4 0.5 0.0017 18.6 0.2 1.6 2 0 0 2 2 2 1 Kelch motif Kelch_1 PF01344.25 ORF28501 - 0.12 12.0 0.6 0.12 12.0 0.6 2.2 2 1 0 2 2 2 0 Kelch motif UT PF03253.14 ORF28323 - 0.026 13.7 1.0 0.03 13.4 1.0 1.1 1 0 0 1 1 1 0 Urea transporter Fis1_TPR_N PF14852.6 ORF28136 - 0.059 13.1 0.6 0.091 12.5 0.6 1.3 1 0 0 1 1 1 0 Fis1 N-terminal tetratricopeptide repeat DUF3807 PF12720.7 ORF27564 - 5 7.4 17.0 5 7.4 17.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) UPF0154 PF03672.13 ORF27520 - 0.11 12.5 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) PepSY_2 PF13670.6 ORF27476 - 0.11 12.5 2.3 0.15 12.1 2.3 1.1 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain Stc1 PF12898.7 ORF27339 - 0.05 14.1 0.0 0.074 13.6 0.0 1.3 1 0 0 1 1 1 0 Stc1 domain Nramp PF01566.18 ORF27282 - 4.4e-20 72.0 0.0 4.7e-20 71.9 0.0 1.0 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein TetR_C_31 PF17940.1 ORF26830 - 0.085 13.1 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF903 PF06004.12 ORF26482 - 4.8e-25 87.2 4.8 5.7e-25 87.0 4.8 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF903) Pirin PF02678.16 ORF26482 - 0.12 12.4 0.1 0.13 12.2 0.1 1.3 1 1 0 1 1 1 0 Pirin EF-hand_7 PF13499.6 ORF26407 - 8.6e-11 42.1 0.2 1.2e-10 41.7 0.2 1.2 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF26407 - 1.8e-09 36.4 1.8 0.0013 18.1 0.2 2.6 2 1 1 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF26407 - 6.3e-08 32.4 1.5 1.8e-07 30.9 0.2 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF26407 - 6.5e-08 31.9 2.1 0.0022 17.8 0.2 2.5 2 1 1 3 3 3 2 EF-hand domain EF-hand_9 PF14658.6 ORF26407 - 3.5e-05 24.0 0.0 4.4e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF26407 - 0.001 18.5 3.1 0.26 10.9 0.1 3.0 2 1 1 3 3 3 2 EF hand N-glycanase_C PF09113.10 ORF26348 - 0.015 15.1 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal Tantalus PF15386.6 ORF2608 - 0.069 13.3 1.6 2 8.6 0.0 2.5 2 1 0 2 2 2 0 Drosophila Tantalus-like EF-hand_1 PF00036.32 ORF25229 - 6.5e-18 62.9 1.1 1.5e-09 36.7 0.3 2.2 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF25229 - 2.3e-15 55.2 1.3 1.5e-06 27.6 0.0 2.6 1 1 2 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF25229 - 1.3e-14 52.9 2.5 2.6e-06 26.7 0.2 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF25229 - 5.5e-14 52.4 0.2 6.9e-14 52.1 0.2 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF25229 - 4.4e-11 42.5 1.3 3e-07 30.2 0.2 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF25229 - 4.4e-05 23.4 0.1 4.6e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF25229 - 0.00016 21.9 0.0 0.00021 21.5 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF25229 - 0.0029 17.9 0.0 0.0039 17.5 0.0 1.3 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region DUF4309 PF14172.6 ORF25229 - 0.072 13.1 0.0 0.087 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) Dockerin_1 PF00404.18 ORF25229 - 0.078 13.2 0.4 1.2 9.4 0.5 2.1 1 1 0 1 1 1 0 Dockerin type I domain EF-hand_10 PF14788.6 ORF25229 - 0.11 12.3 0.1 0.18 11.7 0.0 1.4 1 1 0 1 1 1 0 EF hand SecD-TM1 PF13721.6 ORF25069 - 0.096 13.2 0.2 0.11 13.0 0.2 1.1 1 0 0 1 1 1 0 SecD export protein N-terminal TM region Spt20 PF12090.8 ORF24970 - 1.6 8.3 20.4 1.5 8.4 20.4 1.1 1 0 0 1 1 1 0 Spt20 family Presenilin PF01080.17 ORF24970 - 3.4 6.3 4.8 3 6.5 4.8 1.0 1 0 0 1 1 1 0 Presenilin TFIIA PF03153.13 ORF24970 - 6.1 6.7 19.9 6.4 6.6 19.9 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit MORN PF02493.20 ORF24913 - 1.1e-16 59.6 20.8 9.5e-07 28.4 0.9 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF24913 - 0.023 14.3 0.9 3.2 7.5 0.2 2.3 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain Transglut_C PF00927.22 ORF24313 - 0.06 13.5 0.0 0.078 13.1 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase family, C-terminal ig like domain Claudin_2 PF13903.6 ORF24313 - 0.071 12.9 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF3948 PF13134.6 ORF24313 - 0.37 10.5 5.0 0.63 9.8 5.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3948) baeRF_family12 PF18856.1 ORF24143 - 0.008 16.8 0.4 0.0086 16.7 0.4 1.0 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 12 Ly-6_related PF06579.12 ORF23980 - 0.1 12.9 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Caenorhabditis elegans ly-6-related protein GrpE PF01025.19 ORF23745 - 0.08 12.6 3.0 0.099 12.3 3.0 1.1 1 0 0 1 1 1 0 GrpE Med25 PF11232.8 ORF23669 - 0.0068 16.4 1.5 0.0071 16.3 1.5 1.0 1 0 0 1 1 1 1 Mediator complex subunit 25 PTOV activation and synapsin 2 DUF3970 PF13113.6 ORF23669 - 0.12 12.6 0.1 0.36 11.1 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3970) TMEM100 PF16311.5 ORF23663 - 1.5 8.4 4.7 3.1 7.4 0.7 2.0 1 1 0 2 2 2 0 Transmembrane protein 100 PdxJ PF03740.13 ORF23301 - 3.9e-32 111.2 1.1 4.3e-32 111.1 1.1 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthesis protein PdxJ SAB PF04382.13 ORF23230 - 0.064 13.4 0.1 0.087 12.9 0.1 1.2 1 0 0 1 1 1 0 SAB domain EI24 PF07264.11 ORF2313 - 3.9e-10 40.3 0.1 4.6e-10 40.0 0.1 1.1 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) DUF2678 PF10856.8 ORF2313 - 0.052 13.5 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) Flexi_CP PF00286.20 ORF23022 - 0.17 11.8 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Viral coat protein DUF4139 PF13598.6 ORF22938 - 0.04 13.6 0.0 0.042 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) DUF3880 PF12996.7 ORF22938 - 0.068 13.2 0.0 0.073 13.2 0.0 1.3 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) DUF2417 PF10329.9 ORF21806 - 0.97 8.8 9.9 1.2 8.4 9.9 1.2 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF4790 PF16037.5 ORF21429 - 0.067 13.7 0.2 0.12 12.9 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4790) cwf21 PF08312.12 ORF2065 - 0.043 14.0 0.8 1.2 9.3 0.6 2.2 1 1 1 2 2 2 0 cwf21 domain HycH PF07450.11 ORF2065 - 0.12 12.7 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Formate hydrogenlyase maturation protein HycH SYCE1 PF15233.6 ORF20641 - 0.076 13.1 5.0 0.61 10.1 2.6 2.0 1 1 1 2 2 2 0 Synaptonemal complex central element protein 1 DUF1461 PF07314.11 ORF20600 - 0.3 11.0 5.0 0.36 10.7 5.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) TMEM43 PF07787.12 ORF20600 - 5 6.4 6.7 6 6.2 6.7 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 Pkinase PF00069.25 ORF20247 - 4.2e-14 52.5 0.1 4.5e-14 52.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF20247 - 5.4e-05 22.6 0.1 5.6e-05 22.5 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF20247 - 0.00086 19.0 0.1 0.00086 19.0 0.1 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 ENT PF03735.14 ORF20247 - 0.024 14.7 0.0 0.031 14.3 0.0 1.3 1 1 0 1 1 1 0 ENT domain Pox_vIL-18BP PF05566.12 ORF20247 - 0.085 13.1 0.0 0.086 13.1 0.0 1.2 1 0 0 1 1 1 0 Orthopoxvirus interleukin 18 binding protein ASFV_360 PF01671.16 ORF20195 - 0.029 13.9 0.0 0.032 13.7 0.0 1.0 1 0 0 1 1 1 0 African swine fever virus multigene family 360 protein MORN PF02493.20 ORF20 - 1.1e-16 59.6 20.8 9.5e-07 28.4 0.9 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF20 - 0.023 14.3 0.9 3.2 7.5 0.2 2.3 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain RNA_capsid PF03035.14 ORF19945 - 0.031 14.3 0.3 0.038 14.0 0.3 1.2 1 0 0 1 1 1 0 Calicivirus putative RNA polymerase/capsid protein LPP PF04728.13 ORF19945 - 0.2 12.1 1.7 0.3 11.5 1.7 1.6 1 1 0 1 1 1 0 Lipoprotein leucine-zipper DUF2070 PF09843.9 ORF18854 - 2.9 6.1 7.1 2.9 6.1 7.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) zinc_ribbon_5 PF13719.6 ORF18760 - 0.93 9.3 4.8 5.1 6.9 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Stc1 PF12898.7 ORF18664 - 0.05 14.1 0.0 0.074 13.6 0.0 1.3 1 0 0 1 1 1 0 Stc1 domain Stc1 PF12898.7 ORF18617 - 0.05 14.1 0.0 0.074 13.6 0.0 1.3 1 0 0 1 1 1 0 Stc1 domain Ank PF00023.30 ORF18596 - 3e-12 46.4 0.0 3.9e-05 23.9 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF18596 - 1.8e-11 44.5 0.0 2.2e-11 44.2 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF18596 - 9.6e-09 35.3 0.1 4.8e-05 23.5 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF18596 - 1.9e-08 34.7 0.2 0.0002 21.9 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF18596 - 9.6e-08 31.7 0.0 0.013 16.0 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Cas9_Topo PF17894.1 ORF18596 - 0.026 14.6 0.2 0.49 10.5 0.0 2.0 1 1 1 2 2 2 0 Topo homolgy domain in CRISPR-associated endonuclease Cas9 ATPase_2 PF01637.18 ORF18596 - 0.15 11.9 0.0 15 5.4 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea TRH PF05438.12 ORF18028 - 0.11 12.3 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Thyrotropin-releasing hormone (TRH) Utp13 PF08625.11 ORF16825 - 0.00018 21.4 0.3 0.00028 20.8 0.3 1.3 1 0 0 1 1 1 1 Utp13 specific WD40 associated domain Sas6_CC PF18594.1 ORF16825 - 0.9 9.4 5.5 1.3 8.8 2.1 2.4 2 0 0 2 2 2 0 Sas6/XLF/XRCC4 coiled-coil domain Ribosomal_S7 PF00177.21 ORF16685 - 0.12 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S7p/S5e DUF2714 PF10896.8 ORF16405 - 0.061 13.4 0.3 0.07 13.2 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2714) FAM199X PF15814.5 ORF15899 - 9.7 5.1 10.9 10 5.1 10.9 1.0 1 0 0 1 1 1 0 Protein family FAM199X FSA_C PF10479.9 ORF15899 - 10 4.1 8.2 10 4.1 8.2 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF2615 PF11027.8 ORF15583 - 0.074 13.2 0.0 0.1 12.7 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) Neprosin PF03080.15 ORF15455 - 0.17 11.2 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Neprosin vWF_A PF12450.8 ORF15455 - 0.19 11.7 0.2 0.23 11.4 0.2 1.1 1 0 0 1 1 1 0 von Willebrand factor Exo_endo_phos PF03372.23 ORF14981 - 0.024 14.1 0.3 0.027 14.0 0.3 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Stc1 PF12898.7 ORF14817 - 0.05 14.1 0.0 0.074 13.6 0.0 1.3 1 0 0 1 1 1 0 Stc1 domain CCDC53 PF10152.9 ORF14457 - 3e-07 31.0 0.1 3e-07 31.0 0.1 1.7 2 0 0 2 2 2 1 Subunit CCDC53 of WASH complex NUC153 PF08159.12 ORF14457 - 0.027 14.3 2.2 0.049 13.4 0.1 2.1 2 0 0 2 2 2 0 NUC153 domain MitoNEET_N PF10660.9 ORF14278 - 7.1 6.7 8.0 6.8 6.8 1.5 2.2 1 1 1 2 2 2 0 Iron-containing outer mitochondrial membrane protein N-terminus c-SKI_SMAD_bind PF08782.10 ORF13927 - 0.037 14.2 0.9 0.052 13.8 0.9 1.2 1 0 0 1 1 1 0 c-SKI Smad4 binding domain Pkinase PF00069.25 ORF1384 - 4.3e-11 42.7 1.3 4.3e-11 42.7 1.3 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF1384 - 4.1e-07 29.5 0.2 4.1e-07 29.5 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Seadorna_VP7 PF07387.11 ORF1384 - 0.00035 19.7 0.7 0.00045 19.4 0.7 1.3 1 1 0 1 1 1 1 Seadornavirus VP7 Kinase-like PF14531.6 ORF1384 - 0.0045 16.3 0.0 0.0067 15.8 0.0 1.2 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF1384 - 0.0051 15.6 0.9 0.0051 15.6 0.9 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF1384 - 0.01 15.8 0.9 0.012 15.5 0.9 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family RITA PF17066.5 ORF13422 - 0.004 16.8 0.1 0.004 16.8 0.1 1.2 1 0 0 1 1 1 1 RBPJ-interacting and tubulin associated protein GTP_cyclohydro2 PF00925.20 ORF13335 - 0.15 11.6 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase II TPK_catalytic PF04263.16 ORF112315 - 0.051 13.6 0.0 0.055 13.5 0.0 1.2 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain DUF1548 PF07579.11 ORF111988 - 0.059 13.7 0.1 0.068 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) MerB PF03243.15 ORF111888 - 0.052 13.7 0.0 0.058 13.5 0.0 1.1 1 0 0 1 1 1 0 Alkylmercury lyase Asp2 PF16929.5 ORF111880 - 0.018 14.0 0.0 0.018 14.0 0.0 1.0 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter Hydrolase_4 PF12146.8 ORF111880 - 0.095 11.9 0.0 0.095 11.9 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 zf-CCCH PF00642.24 ORF111114 - 7.8e-13 48.0 8.5 3e-09 36.5 0.7 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF111114 - 4.2e-07 29.8 14.8 2e-05 24.5 1.9 2.2 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF111114 - 6.2e-05 22.7 11.7 0.0005 19.8 1.3 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_2 PF14608.6 ORF111114 - 0.0073 16.7 12.1 0.046 14.2 0.9 2.6 2 1 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Torus PF16131.5 ORF111114 - 0.027 15.2 7.1 0.069 13.9 0.6 2.1 1 1 1 2 2 2 0 Torus domain DUF4374 PF14298.6 ORF110789 - 0.045 12.6 0.0 0.049 12.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4374) PIG-P PF08510.12 ORF110775 - 0.083 12.8 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 PIG-P Phage_P2_GpU PF06995.11 ORF110732 - 0.075 12.6 0.2 0.087 12.4 0.2 1.0 1 0 0 1 1 1 0 Phage P2 GpU TMF_DNA_bd PF12329.8 ORF110545 - 0.0057 16.6 9.3 0.05 13.6 3.6 2.1 1 1 1 2 2 2 2 TATA element modulatory factor 1 DNA binding CENP-F_leu_zip PF10473.9 ORF110545 - 0.008 16.2 8.8 0.0092 16.0 8.8 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Tropomyosin PF00261.20 ORF110545 - 0.0085 15.5 6.9 0.013 14.9 6.9 1.3 1 1 0 1 1 1 1 Tropomyosin PspA_IM30 PF04012.12 ORF110545 - 0.015 14.9 2.3 0.14 11.7 1.2 2.0 1 1 1 2 2 2 0 PspA/IM30 family EzrA PF06160.12 ORF110545 - 0.019 13.1 9.3 0.022 13.0 9.3 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Prefoldin PF02996.17 ORF110545 - 0.054 13.4 6.0 0.9 9.5 0.9 2.1 2 0 0 2 2 2 0 Prefoldin subunit Tropomyosin_1 PF12718.7 ORF110545 - 0.059 13.5 7.6 0.072 13.3 7.6 1.1 1 0 0 1 1 1 0 Tropomyosin like KxDL PF10241.9 ORF110545 - 0.06 13.6 3.1 2.8 8.3 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein DUF2570 PF10828.8 ORF110545 - 0.081 12.8 2.9 0.1 12.4 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) DUF4200 PF13863.6 ORF110545 - 0.16 12.4 7.5 0.74 10.2 2.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Fib_alpha PF08702.10 ORF110545 - 0.17 12.0 4.7 0.44 10.7 4.7 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Laminin_II PF06009.12 ORF110545 - 0.18 11.8 5.1 0.23 11.5 5.1 1.0 1 0 0 1 1 1 0 Laminin Domain II DUF572 PF04502.13 ORF110545 - 0.22 11.1 5.1 0.23 11.0 5.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) HMMR_N PF15905.5 ORF110545 - 0.24 10.9 8.9 0.26 10.7 8.9 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal ZapB PF06005.12 ORF110545 - 0.24 11.9 9.0 1.3 9.5 8.8 1.9 1 1 0 1 1 1 0 Cell division protein ZapB CENP-H PF05837.12 ORF110545 - 0.34 11.3 5.4 0.4 11.1 5.4 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) UPF0242 PF06785.11 ORF110545 - 0.45 10.6 8.0 0.52 10.4 8.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5446 PF17522.2 ORF110545 - 0.61 10.3 6.6 3.2 8.0 6.6 2.0 1 1 0 1 1 1 0 Family of unknown function (DUF5446) FapA PF03961.13 ORF110545 - 0.74 8.3 8.5 0.76 8.3 8.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A bZIP_1 PF00170.21 ORF110545 - 1 9.5 9.7 15 5.8 5.4 3.0 1 1 1 2 2 2 0 bZIP transcription factor XhlA PF10779.9 ORF110545 - 3.5 7.9 8.3 0.96 9.7 1.5 2.2 1 1 1 2 2 2 0 Haemolysin XhlA GrpE PF01025.19 ORF110300 - 0.08 12.6 3.0 0.099 12.3 3.0 1.1 1 0 0 1 1 1 0 GrpE DUF1068 PF06364.12 ORF109938 - 7.6 6.4 11.7 16 5.3 11.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1068) DUF2070 PF09843.9 ORF109696 - 2.9 6.1 7.1 2.9 6.1 7.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MAGP PF05507.11 ORF108896 - 0.038 14.4 0.5 0.04 14.3 0.5 1.2 1 0 0 1 1 1 0 Microfibril-associated glycoprotein (MAGP) Calsequestrin PF01216.17 ORF108327 - 0.12 11.4 0.1 0.13 11.2 0.1 1.0 1 0 0 1 1 1 0 Calsequestrin LCE6A PF15858.5 ORF108195 - 0.76 10.6 4.1 2.3 9.0 4.1 1.7 1 1 0 1 1 1 0 Late cornified envelope protein 6A family Fer2_4 PF13510.6 ORF108004 - 2.2e-06 27.6 0.0 3.4e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2 PF00111.27 ORF108004 - 0.0083 16.1 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Myb_DNA-bind_3 PF12776.7 ORF107966 - 0.052 14.5 0.6 0.06 14.3 0.6 1.1 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain Peptidase_C7 PF01830.18 ORF107299 - 0.066 12.6 0.1 0.07 12.5 0.1 1.1 1 0 0 1 1 1 0 Peptidase C7 family DUF3487 PF11990.8 ORF106076 - 9.1 6.2 11.4 12 5.8 11.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) CENP-H PF05837.12 ORF106061 - 0.0005 20.5 1.5 0.00054 20.3 1.5 1.1 1 0 0 1 1 1 1 Centromere protein H (CENP-H) TolA_bind_tri PF16331.5 ORF106061 - 0.00067 19.7 0.2 0.0013 18.7 0.1 1.5 1 1 0 1 1 1 1 TolA binding protein trimerisation ZapB PF06005.12 ORF106061 - 0.00073 19.9 1.1 0.00092 19.6 1.1 1.2 1 0 0 1 1 1 1 Cell division protein ZapB bZIP_1 PF00170.21 ORF106061 - 0.0024 17.9 0.9 0.0024 17.9 0.9 1.8 1 1 1 2 2 2 1 bZIP transcription factor CASP_C PF08172.12 ORF106061 - 0.0076 15.6 0.4 0.0084 15.5 0.4 1.0 1 0 0 1 1 1 1 CASP C terminal Spc7 PF08317.11 ORF106061 - 0.009 14.9 1.7 0.0099 14.8 1.7 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Anillin_N PF16018.5 ORF106061 - 0.013 16.0 0.2 0.029 15.0 0.0 1.6 2 0 0 2 2 2 0 Anillin N-terminus YabA PF06156.13 ORF106061 - 0.014 16.0 1.7 0.016 15.9 1.7 1.1 1 0 0 1 1 1 0 Initiation control protein YabA Herpes_UL6 PF01763.16 ORF106061 - 0.022 13.3 1.2 0.023 13.2 1.2 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like FlaC_arch PF05377.11 ORF106061 - 0.027 14.9 1.9 0.029 14.8 0.4 1.7 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DivIC PF04977.15 ORF106061 - 0.036 13.9 0.5 0.043 13.6 0.5 1.2 1 0 0 1 1 1 0 Septum formation initiator TSC22 PF01166.18 ORF106061 - 0.051 13.9 0.4 0.078 13.3 0.3 1.4 1 1 0 1 1 1 0 TSC-22/dip/bun family Glyoxal_oxid_N PF07250.11 ORF106018 - 0.1 11.7 0.2 0.12 11.5 0.2 1.1 1 0 0 1 1 1 0 Glyoxal oxidase N-terminus Nbas_N PF15492.6 ORF105809 - 0.02 14.2 0.0 0.022 14.1 0.0 1.0 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal DUF4051 PF13260.6 ORF10563 - 0.007 16.1 2.0 0.0099 15.6 2.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4051) CagS PF16707.5 ORF10563 - 0.04 13.9 0.1 0.047 13.7 0.1 1.0 1 0 0 1 1 1 0 Cag pathogenicity island protein S of Helicobacter pylori PufQ PF05398.11 ORF10563 - 0.052 13.7 0.1 0.062 13.4 0.1 1.1 1 0 0 1 1 1 0 PufQ cytochrome subunit Pkinase PF00069.25 ORF105600 - 4.3e-11 42.7 1.3 4.3e-11 42.7 1.3 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105600 - 4.1e-07 29.5 0.2 4.1e-07 29.5 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Seadorna_VP7 PF07387.11 ORF105600 - 0.00035 19.7 0.7 0.00045 19.4 0.7 1.3 1 1 0 1 1 1 1 Seadornavirus VP7 Kinase-like PF14531.6 ORF105600 - 0.0045 16.3 0.0 0.0067 15.8 0.0 1.2 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF105600 - 0.0051 15.6 0.9 0.0051 15.6 0.9 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF105600 - 0.01 15.8 0.9 0.012 15.5 0.9 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family MitoNEET_N PF10660.9 ORF10547 - 7.1 6.7 8.0 6.8 6.8 1.5 2.2 1 1 1 2 2 2 0 Iron-containing outer mitochondrial membrane protein N-terminus HpaP PF09483.10 ORF104981 - 0.013 15.7 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Type III secretion protein (HpaP) Adeno_PV PF03910.13 ORF104981 - 0.15 10.7 0.6 0.15 10.7 0.6 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV DUF4329 PF14220.6 ORF104615 - 0.026 14.5 0.0 0.028 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4329) CoA_transf_3 PF02515.17 ORF10375 - 7.7e-06 25.3 0.0 8.9e-06 25.1 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III DUF489 PF04356.12 ORF103497 - 0.0023 17.9 0.0 0.0025 17.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF489) BAR PF03114.18 ORF103497 - 0.0052 16.5 0.0 0.006 16.3 0.0 1.2 1 0 0 1 1 1 1 BAR domain ING PF12998.7 ORF103497 - 0.025 15.2 0.0 0.028 15.0 0.0 1.1 1 0 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding Occludin_ELL PF07303.13 ORF103497 - 0.046 14.4 0.0 0.052 14.3 0.0 1.1 1 0 0 1 1 1 0 Occludin homology domain Bac_RepA_C PF18008.1 ORF103497 - 0.057 13.8 0.0 0.065 13.6 0.0 1.1 1 0 0 1 1 1 0 Replication initiator protein A C-terminal domain Spectrin PF00435.21 ORF103497 - 0.13 12.8 0.0 0.15 12.6 0.0 1.0 1 0 0 1 1 1 0 Spectrin repeat Metallophos_2 PF12850.7 ORF103434 - 3.3e-05 24.1 0.0 3.8e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF4820 PF16091.5 ORF103133 - 0.029 13.8 0.5 0.03 13.7 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) PIG-P PF08510.12 ORF102918 - 0.11 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 PIG-P FXa_inhibition PF14670.6 ORF102900 - 0.043 14.1 1.6 0.043 14.1 1.6 2.1 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site Orexin PF02072.15 ORF102900 - 0.08 12.9 1.2 0.078 12.9 1.2 1.1 1 0 0 1 1 1 0 Prepro-orexin IL6 PF00489.17 ORF102900 - 0.15 11.6 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Interleukin-6/G-CSF/MGF family MORN PF02493.20 ORF102679 - 1.1e-16 59.6 20.8 9.5e-07 28.4 0.9 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF102679 - 0.023 14.3 0.9 3.2 7.5 0.2 2.3 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain AAA_21 PF13304.6 ORF100962 - 0.0012 18.7 0.1 0.0016 18.3 0.1 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system TniB PF05621.11 ORF100962 - 0.0091 15.4 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein His_Phos_1 PF00300.22 ORF100701 - 9.4e-05 22.2 0.0 9.9e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DNA_alkylation PF08713.11 ORF100530 - 0.088 12.5 1.1 0.11 12.2 1.1 1.1 1 0 0 1 1 1 0 DNA alkylation repair enzyme Prok-RING_4 PF14447.6 NODE_70887_length_223_cov_0.851064_g62946_i0reverse_frame_1 - 0.0076 16.1 0.5 0.011 15.6 0.5 1.4 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 Tmemb_40 PF10160.9 NODE_70886_length_223_cov_0.851064_g62945_i0forward_frame_1 - 0.051 13.0 0.1 0.06 12.8 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein A_amylase_inhib PF01356.19 NODE_70881_length_223_cov_0.882979_g62940_i0forward_frame_1 - 0.039 13.9 0.6 0.057 13.4 0.6 1.2 1 0 0 1 1 1 0 Alpha amylase inhibitor Phage_int_SAM_3 PF14659.6 NODE_70871_length_223_cov_1.037234_g62930_i0reverse_frame_1 - 0.17 12.2 0.0 0.24 11.7 0.0 1.1 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Fer4_23 PF18009.1 NODE_70868_length_223_cov_1.053191_g62927_i0reverse_frame_1 - 0.034 14.5 0.1 0.046 14.1 0.1 1.3 1 0 0 1 1 1 0 4Fe-4S iron-sulfur cluster binding domain SNF5 PF04855.12 NODE_70866_length_223_cov_1.063830_g62925_i0reverse_frame_1 - 0.13 12.0 8.3 0.14 11.9 8.3 1.0 1 0 0 1 1 1 0 SNF5 / SMARCB1 / INI1 PIEZO PF15917.5 NODE_70866_length_223_cov_1.063830_g62925_i0reverse_frame_1 - 5.7 6.4 13.6 6.5 6.2 13.6 1.0 1 0 0 1 1 1 0 Piezo Pyridox_ox_2 PF12900.7 NODE_70864_length_223_cov_1.079787_g62923_i0reverse_frame_1 - 0.014 15.4 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase Sulfatase PF00884.23 NODE_70854_length_223_cov_1.202128_g62913_i0forward_frame_1 - 0.042 13.3 0.1 0.042 13.2 0.1 1.0 1 0 0 1 1 1 0 Sulfatase TFCD_C PF12612.8 NODE_70854_length_223_cov_1.202128_g62913_i0forward_frame_1 - 0.19 11.5 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 Tubulin folding cofactor D C terminal AA_permease_2 PF13520.6 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.13 11.0 10.0 0.12 11.1 10.0 1.0 1 0 0 1 1 1 0 Amino acid permease AmpE PF17113.5 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.15 11.4 4.7 0.16 11.3 4.7 1.1 1 0 0 1 1 1 0 Regulatory signalling modulator protein AmpE 7TMR-DISM_7TM PF07695.11 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.2 11.5 7.9 0.25 11.2 7.9 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling CBP_BcsG PF11658.8 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.43 8.9 3.3 0.39 9.1 3.3 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG DUF2207 PF09972.9 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.44 9.2 5.0 0.43 9.3 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Pex24p PF06398.11 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 4.9 6.0 7.6 5 6.0 7.6 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin EphA2_TM PF14575.6 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 9.6 7.2 14.4 0.42 11.5 4.0 2.1 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain FGGY_N PF00370.21 NODE_70833_length_223_cov_1.276596_g62892_i0reverse_frame_1 - 3.3e-14 53.1 0.0 3.8e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain GDC-P PF02347.16 NODE_70831_length_223_cov_1.276596_g62890_i0reverse_frame_1 - 1.8e-34 119.3 0.2 1.9e-34 119.2 0.2 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein zf-AD PF07776.15 NODE_70825_length_223_cov_1.372340_g62884_i0reverse_frame_1 - 0.031 14.5 0.2 0.041 14.1 0.2 1.3 1 1 0 1 1 1 0 Zinc-finger associated domain (zf-AD) DUF716 PF04819.12 NODE_70823_length_223_cov_1.382979_g62882_i0forward_frame_1 - 0.054 13.1 2.2 0.058 13.0 2.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF716) Lambda_CIII PF02061.16 NODE_70819_length_223_cov_1.409574_g62878_i0reverse_frame_1 - 0.046 13.8 0.6 4.5 7.4 0.1 2.9 1 1 2 3 3 3 0 Lambda Phage CIII DUF4909 PF16253.5 NODE_70806_length_223_cov_1.489362_g62865_i0reverse_frame_1 - 0.093 12.6 0.2 0.11 12.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4909) LytTR PF04397.15 NODE_70796_length_223_cov_1.590426_g62855_i0forward_frame_1 - 0.035 14.3 0.1 0.049 13.8 0.1 1.3 1 1 0 1 1 1 0 LytTr DNA-binding domain DUF3045 PF11243.8 NODE_70789_length_223_cov_1.638298_g62848_i0forward_frame_1 - 0.29 11.3 0.6 0.37 11.0 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3045) Msap1 PF17077.5 NODE_70788_length_223_cov_1.638298_g62847_i0reverse_frame_1 - 0.022 13.9 0.0 0.026 13.7 0.0 1.0 1 0 0 1 1 1 0 Mitotic spindle associated protein SHE1 ZapD PF07072.11 NODE_70785_length_223_cov_1.675532_g62844_i0reverse_frame_1 - 0.16 11.7 1.2 0.18 11.5 1.2 1.0 1 0 0 1 1 1 0 Cell division protein NTP_transferase PF00483.23 NODE_70779_length_223_cov_1.696809_g62838_i0forward_frame_1 - 0.13 11.8 0.9 0.16 11.6 0.9 1.0 1 0 0 1 1 1 0 Nucleotidyl transferase DUF5320 PF17253.2 NODE_70779_length_223_cov_1.696809_g62838_i0forward_frame_1 - 0.41 11.7 2.1 0.36 11.9 1.0 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5320) Ly49 PF08391.10 NODE_70779_length_223_cov_1.696809_g62838_i0forward_frame_1 - 1.4 9.3 7.4 1.5 9.2 7.4 1.0 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region DUF1656 PF07869.12 NODE_70777_length_223_cov_1.696809_g62836_i0reverse_frame_1 - 0.042 13.9 4.6 0.056 13.4 4.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1656) HHH_3 PF12836.7 NODE_70774_length_223_cov_1.702128_g62833_i0reverse_frame_1 - 0.032 14.5 0.1 0.036 14.3 0.1 1.2 1 0 0 1 1 1 0 Helix-hairpin-helix motif YjhX_toxin PF09857.9 NODE_70774_length_223_cov_1.702128_g62833_i0reverse_frame_1 - 0.046 13.7 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Putative toxin of bacterial toxin-antitoxin pair IBV_3C PF03620.13 NODE_70771_length_223_cov_1.739362_g62830_i0reverse_frame_1 - 0.1 13.1 0.1 0.13 12.7 0.1 1.1 1 0 0 1 1 1 0 IBV 3C protein DAGK_acc PF00609.19 NODE_70763_length_223_cov_1.840426_g62822_i0reverse_frame_1 - 1.2e-05 25.7 0.1 1.5e-05 25.4 0.1 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain UPF0515 PF15135.6 NODE_70755_length_223_cov_1.994681_g62814_i0reverse_frame_1 - 0.28 10.5 4.1 0.33 10.3 4.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 AAA_assoc PF14363.6 NODE_70753_length_223_cov_2.010638_g62812_i0reverse_frame_1 - 0.01 16.2 0.2 0.011 16.0 0.2 1.2 1 0 0 1 1 1 1 Domain associated at C-terminal with AAA DUF3316 PF11777.8 NODE_70753_length_223_cov_2.010638_g62812_i0reverse_frame_1 - 0.068 13.2 0.7 0.084 12.9 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3316) DUF5578 PF17741.1 NODE_70748_length_223_cov_2.042553_g62807_i0forward_frame_1 - 0.11 11.9 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5578) WRC PF08879.10 NODE_70748_length_223_cov_2.042553_g62807_i0forward_frame_1 - 0.15 11.7 0.1 0.24 11.1 0.1 1.4 1 0 0 1 1 1 0 WRC DUF433 PF04255.14 NODE_70747_length_223_cov_2.053191_g62806_i0forward_frame_1 - 0.15 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF433) PI31_Prot_N PF11566.8 NODE_70744_length_223_cov_2.079787_g62803_i0reverse_frame_1 - 0.13 12.0 0.1 0.15 11.9 0.1 1.1 1 0 0 1 1 1 0 PI31 proteasome regulator N-terminal Lamprin PF06403.11 NODE_70737_length_223_cov_2.212766_g62796_i0forward_frame_1 - 0.52 10.3 5.2 0.9 9.5 5.2 1.6 1 1 0 1 1 1 0 Lamprin KIX_2 PF16987.5 NODE_70717_length_223_cov_2.611702_g62776_i0reverse_frame_1 - 0.0065 16.4 0.2 0.0085 16.1 0.2 1.3 1 0 0 1 1 1 1 KIX domain Abhydrolase_3 PF07859.13 NODE_70715_length_223_cov_2.648936_g62774_i0forward_frame_1 - 7.7e-06 25.9 0.0 8.1e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Vac_Fusion PF02346.16 NODE_70714_length_223_cov_2.654255_g62773_i0reverse_frame_1 - 0.013 15.1 0.1 0.017 14.7 0.1 1.3 1 0 0 1 1 1 0 Chordopoxvirus multifunctional envelope protein A27 FBA_2 PF07735.17 NODE_70714_length_223_cov_2.654255_g62773_i0reverse_frame_1 - 0.079 13.1 1.0 0.13 12.4 0.5 1.6 1 1 0 1 1 1 0 F-box associated Acyltransferase PF01553.21 NODE_70712_length_223_cov_2.670213_g62771_i0forward_frame_1 - 6.1e-07 29.1 0.0 6.9e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 Acyltransferase FPL PF09758.9 NODE_70702_length_223_cov_3.191489_g62761_i0reverse_frame_1 - 0.021 14.8 1.4 0.023 14.7 1.4 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein SSrecog PF03531.14 NODE_70695_length_223_cov_4.154255_g62754_i0forward_frame_1 - 0.031 14.2 0.0 0.043 13.7 0.0 1.3 1 0 0 1 1 1 0 Structure-specific recognition protein (SSRP1) DUF3578 PF12102.8 NODE_70675_length_223_cov_36.712766_g62734_i0reverse_frame_1 - 0.012 15.3 0.3 0.013 15.1 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3578) DUF2633 PF11119.8 NODE_70671_length_223_cov_42.223404_g62730_i0reverse_frame_1 - 0.02 14.8 0.1 0.032 14.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) CaKB PF03185.15 NODE_70670_length_223_cov_44.824468_g62729_i0reverse_frame_1 - 0.039 13.6 0.7 0.042 13.5 0.7 1.0 1 0 0 1 1 1 0 Calcium-activated potassium channel, beta subunit DUF4710 PF15828.5 NODE_70665_length_223_cov_49.191489_g62724_i0reverse_frame_1 - 0.77 9.9 9.0 1.2 9.3 9.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) TSGP1 PF07771.11 NODE_70665_length_223_cov_49.191489_g62724_i0reverse_frame_1 - 5.6 7.1 12.0 8.6 6.5 12.0 1.3 1 1 0 1 1 1 0 Tick salivary peptide group 1 DUF2515 PF10720.9 NODE_70661_length_223_cov_51.765957_g62720_i0reverse_frame_1 - 0.076 12.2 0.0 0.076 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2515) RtcB PF01139.17 NODE_70655_length_223_cov_59.904255_g62714_i0forward_frame_1 - 0.011 15.0 0.0 0.011 14.9 0.0 1.0 1 0 0 1 1 1 0 tRNA-splicing ligase RtcB RNase_E_G PF10150.9 NODE_70648_length_223_cov_68.021277_g62707_i0forward_frame_1 - 0.075 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Ribonuclease E/G family DUF3860 PF12976.7 NODE_70648_length_223_cov_68.021277_g62707_i0forward_frame_1 - 0.096 12.7 0.0 0.098 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3860) Stc1 PF12898.7 NODE_70644_length_223_cov_78.808511_g62703_i0reverse_frame_1 - 0.011 16.3 2.1 0.012 16.1 2.1 1.1 1 0 0 1 1 1 0 Stc1 domain Coq4 PF05019.13 NODE_70640_length_223_cov_91.313830_g62699_i0reverse_frame_1 - 0.0014 18.0 0.0 0.0018 17.7 0.0 1.0 1 0 0 1 1 1 1 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 DUF2633 PF11119.8 NODE_70636_length_223_cov_102.521277_g62695_i0forward_frame_1 - 7.7 6.5 6.8 1.1 9.2 2.6 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2633) SMC_ScpA PF02616.14 NODE_70633_length_223_cov_113.941489_g62692_i0reverse_frame_1 - 0.17 11.8 2.2 0.2 11.5 2.2 1.0 1 0 0 1 1 1 0 Segregation and condensation protein ScpA FAM176 PF14851.6 NODE_70633_length_223_cov_113.941489_g62692_i0reverse_frame_1 - 0.22 11.1 3.3 0.24 11.1 3.3 1.1 1 0 0 1 1 1 0 FAM176 family DUF4611 PF15387.6 NODE_70633_length_223_cov_113.941489_g62692_i0reverse_frame_1 - 0.58 10.4 7.2 0.83 9.9 7.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) DUF2459 PF09601.10 NODE_70628_length_223_cov_155.196809_g62687_i0reverse_frame_1 - 0.15 11.9 0.3 0.16 11.8 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2459) DUF5477 PF17571.2 NODE_70627_length_223_cov_163.617021_g62686_i0forward_frame_1 - 0.062 13.5 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5477) Autophagy_C PF10381.9 NODE_70621_length_223_cov_238.569149_g62680_i0forward_frame_1 - 0.21 11.2 0.0 25 4.5 0.0 2.2 2 0 0 2 2 2 0 Autophagocytosis associated protein C-terminal DICT PF10069.9 NODE_70619_length_223_cov_371.547872_g62678_i0forward_frame_1 - 0.14 11.9 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Sensory domain in DIguanylate Cyclases and Two-component system Mt_ATP-synt_B PF05405.14 NODE_70619_length_223_cov_371.547872_g62678_i0forward_frame_1 - 0.15 11.6 1.0 0.19 11.3 1.0 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) TPR_1 PF00515.28 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 3.6e-06 26.6 1.0 0.00074 19.2 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.00039 20.3 0.7 0.029 14.5 0.1 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.0013 18.6 0.1 0.26 11.4 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat Sel1 PF08238.12 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.0066 17.1 0.2 0.14 12.8 0.0 2.4 2 0 0 2 2 2 1 Sel1 repeat TPR_8 PF13181.6 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.0098 16.0 1.0 0.25 11.7 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.01 16.1 0.2 0.032 14.5 0.1 1.8 1 1 0 1 1 1 0 Tetratricopeptide repeat ComFB PF10719.9 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.15 12.2 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Late competence development protein ComFB TPR_12 PF13424.6 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 1.2e-13 51.1 0.1 1.6e-08 34.7 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 6.2e-13 48.2 0.0 1.5e-08 34.2 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 0.0055 16.7 0.1 0.0091 16.0 0.1 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 0.062 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF1358 PF07096.11 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 0.11 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) TPR_7 PF13176.6 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 0.15 12.2 0.0 0.3 11.2 0.0 1.5 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF1736 PF08409.11 NODE_70610_length_224_cov_0.846561_g62669_i0reverse_frame_1 - 0.029 14.4 0.4 0.044 13.8 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1736) Tcf25 PF04910.14 NODE_70604_length_224_cov_0.947090_g62663_i0forward_frame_1 - 0.069 12.2 0.0 0.069 12.2 0.0 1.0 1 0 0 1 1 1 0 Transcriptional repressor TCF25 Tox-SGS PF15651.6 NODE_70590_length_224_cov_1.058201_g62649_i0reverse_frame_1 - 0.047 13.9 0.1 0.053 13.8 0.1 1.1 1 0 0 1 1 1 0 Salivary glad secreted protein domain toxin DUF547 PF04784.14 NODE_70579_length_224_cov_1.179894_g62638_i0forward_frame_1 - 0.042 13.9 0.0 0.045 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF547 Nbl1_Borealin_N PF10444.9 NODE_70577_length_224_cov_1.222222_g62636_i0forward_frame_1 - 0.052 13.2 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Nucleoplasmin PF03066.15 NODE_70571_length_224_cov_1.259259_g62630_i0reverse_frame_1 - 0.014 15.8 0.3 0.017 15.6 0.3 1.2 1 0 0 1 1 1 0 Nucleoplasmin/nucleophosmin domain UPF0561 PF10573.9 NODE_70571_length_224_cov_1.259259_g62630_i0reverse_frame_1 - 0.035 14.2 1.5 0.82 9.8 1.5 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0561 Lipase_chap PF03280.14 NODE_70571_length_224_cov_1.259259_g62630_i0reverse_frame_1 - 0.68 9.9 13.9 0.75 9.7 13.9 1.1 1 0 0 1 1 1 0 Proteobacterial lipase chaperone protein TPR_10 PF13374.6 NODE_70570_length_224_cov_1.259259_g62629_i0reverse_frame_1 - 4.6e-19 67.7 0.0 8.4e-10 38.2 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_70570_length_224_cov_1.259259_g62629_i0reverse_frame_1 - 3.2e-16 59.4 0.8 1.4e-10 41.3 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat NuDC PF16273.5 NODE_70570_length_224_cov_1.259259_g62629_i0reverse_frame_1 - 0.033 14.7 0.7 3.2 8.3 0.1 2.1 2 0 0 2 2 2 0 Nuclear distribution C domain FixQ PF05545.11 NODE_70566_length_224_cov_1.264550_g62625_i0reverse_frame_1 - 1.3 9.1 6.4 2.1 8.4 6.4 1.4 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DDT PF02791.17 NODE_70565_length_224_cov_1.264550_g62624_i0reverse_frame_1 - 0.031 14.6 0.2 0.054 13.8 0.2 1.5 1 0 0 1 1 1 0 DDT domain Acyl-CoA_dh_C PF12806.7 NODE_70565_length_224_cov_1.264550_g62624_i0reverse_frame_1 - 0.11 12.6 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Acetyl-CoA dehydrogenase C-terminal like DUF3898 PF13037.6 NODE_70562_length_224_cov_1.269841_g62621_i0forward_frame_1 - 0.04 14.0 0.1 0.049 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3898) DivIC PF04977.15 NODE_70555_length_224_cov_1.280423_g62614_i0forward_frame_1 - 1.4 8.7 7.2 0.5 10.2 3.6 1.8 1 1 1 2 2 2 0 Septum formation initiator DUF2418 PF10332.9 NODE_70554_length_224_cov_1.296296_g62613_i0forward_frame_1 - 0.55 10.8 4.1 0.61 10.7 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) CLIP PF12032.8 NODE_70543_length_224_cov_1.407407_g62602_i0reverse_frame_1 - 0.037 14.3 0.0 0.055 13.7 0.0 1.3 1 0 0 1 1 1 0 Regulatory CLIP domain of proteinases zf_CCCH_5 PF18384.1 NODE_70539_length_224_cov_1.444444_g62598_i0forward_frame_1 - 0.026 14.7 1.0 0.026 14.7 1.0 2.1 2 0 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) Chlam_PMP PF02415.17 NODE_70525_length_224_cov_1.587302_g62584_i0reverse_frame_1 - 1.5 9.4 10.3 14 6.5 1.4 3.2 3 0 0 3 3 3 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat DUF3913 PF13052.6 NODE_70521_length_224_cov_1.608466_g62580_i0forward_frame_1 - 0.15 12.3 0.0 0.2 12.0 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3913) zf-H2C2_2 PF13465.6 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_1 - 0.0026 18.1 0.1 0.0045 17.3 0.1 1.5 1 0 0 1 1 1 1 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_1 - 0.0077 16.6 2.0 0.53 10.9 0.0 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_1 - 0.023 15.5 1.9 6.6 7.9 0.0 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger Chlam_OMP6 PF03504.13 NODE_70510_length_224_cov_1.687831_g62569_i0forward_frame_1 - 0.11 12.8 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 6 TetR_C_7 PF14246.6 NODE_70508_length_224_cov_1.724868_g62567_i0reverse_frame_1 - 0.085 12.9 0.1 0.088 12.8 0.1 1.1 1 0 0 1 1 1 0 AefR-like transcriptional repressor, C-terminal domain DUF1158 PF06643.11 NODE_70504_length_224_cov_1.783069_g62563_i0forward_frame_1 - 0.068 13.7 0.2 0.081 13.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1158) HisKA PF00512.25 NODE_70500_length_224_cov_1.825397_g62559_i0reverse_frame_1 - 0.0046 17.0 1.7 0.03 14.4 1.7 1.9 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain DUF3915 PF13054.6 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_1 - 0.0063 16.5 4.4 0.0078 16.2 4.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_1 - 0.37 9.0 6.2 0.37 9.0 6.2 1.1 1 0 0 1 1 1 0 Atrophin-1 family Laminin_EGF PF00053.24 NODE_70495_length_224_cov_1.920635_g62554_i0reverse_frame_1 - 0.11 12.7 3.5 0.15 12.2 3.5 1.5 1 1 0 1 1 1 0 Laminin EGF domain TPR_2 PF07719.17 NODE_70493_length_224_cov_1.941799_g62552_i0reverse_frame_1 - 0.033 14.3 0.0 0.059 13.5 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_70493_length_224_cov_1.941799_g62552_i0reverse_frame_1 - 0.12 12.3 0.1 0.2 11.5 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DNA_methylase PF00145.17 NODE_70492_length_224_cov_1.947090_g62551_i0forward_frame_1 - 0.15 11.4 0.0 0.18 11.1 0.0 1.0 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks322.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks322.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks322.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks322.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Connexin PF00029.19 NODE_70487_length_224_cov_2.015873_g62546_i0reverse_frame_1 - 0.0086 15.9 0.0 0.009 15.8 0.0 1.0 1 0 0 1 1 1 1 Connexin Cytochrom_B558a PF05038.13 NODE_70479_length_224_cov_2.195767_g62538_i0reverse_frame_1 - 0.029 14.0 0.3 0.03 13.9 0.3 1.1 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit Proton_antipo_N PF00662.20 NODE_70479_length_224_cov_2.195767_g62538_i0forward_frame_1 - 0.13 12.4 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E_raikovi_mat PF06360.11 NODE_70476_length_224_cov_2.248677_g62535_i0reverse_frame_1 - 0.071 13.5 0.6 0.071 13.5 0.6 1.9 2 0 0 2 2 2 0 Euplotes raikovi mating pheromone RNA12 PF10443.9 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 0.25 10.0 6.8 0.27 9.9 6.8 1.0 1 0 0 1 1 1 0 RNA12 protein TMPIT PF07851.13 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 3.2 6.9 9.8 3.2 6.9 9.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein DDRGK PF09756.9 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 4.5 6.8 21.5 4.9 6.7 21.5 1.0 1 0 0 1 1 1 0 DDRGK domain DUF2203 PF09969.9 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 5.3 7.8 11.5 6.6 7.5 11.5 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF724 PF05266.14 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 5.4 6.8 14.7 5.9 6.7 14.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) CIAPIN1 PF05093.13 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 8.1 7.0 8.7 9.5 6.8 8.7 1.1 1 0 0 1 1 1 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis Lamprin PF06403.11 NODE_70471_length_224_cov_2.317460_g62530_i0forward_frame_1 - 0.57 10.1 7.2 0.7 9.9 7.2 1.2 1 0 0 1 1 1 0 Lamprin Chromo_2 PF18704.1 NODE_70469_length_224_cov_2.322751_g62528_i0reverse_frame_1 - 0.015 15.6 0.2 0.023 15.0 0.2 1.3 1 0 0 1 1 1 0 Chromatin organization modifier domain 2 DUF1327 PF07041.11 NODE_70468_length_224_cov_2.328042_g62527_i0forward_frame_1 - 8e-28 96.7 0.0 9e-28 96.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1327) DUF874 PF05917.11 NODE_70465_length_224_cov_2.375661_g62524_i0reverse_frame_1 - 0.15 11.0 0.0 0.17 10.9 0.0 1.0 1 0 0 1 1 1 0 Helicobacter pylori protein of unknown function (DUF874) DUF3449 PF11931.8 NODE_70460_length_224_cov_2.465608_g62519_i0reverse_frame_1 - 0.065 13.0 0.0 0.071 12.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) MFS_1 PF07690.16 NODE_70459_length_224_cov_2.534392_g62518_i0reverse_frame_1 - 4.7e-08 32.3 2.6 5.1e-08 32.2 2.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1 PF07690.16 NODE_70447_length_224_cov_2.825397_g62506_i0forward_frame_1 - 8.2e-06 25.0 0.1 9e-06 24.8 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ATG22 PF11700.8 NODE_70447_length_224_cov_2.825397_g62506_i0forward_frame_1 - 0.055 12.1 0.2 0.06 12.0 0.2 1.0 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like Tox-MPTase2 PF15638.6 NODE_70446_length_224_cov_2.830688_g62505_i0reverse_frame_1 - 0.18 11.5 0.0 0.18 11.5 0.0 1.0 1 0 0 1 1 1 0 Metallopeptidase toxin 2 DUF3915 PF13054.6 NODE_70445_length_224_cov_2.830688_g62504_i0reverse_frame_1 - 4.7 7.2 34.7 3.6 7.6 16.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3915) ORC5_C PF14630.6 NODE_70445_length_224_cov_2.830688_g62504_i0reverse_frame_1 - 7.2 6.0 9.6 10 5.6 9.2 1.4 1 1 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus BPD_transp_1 PF00528.22 NODE_70442_length_224_cov_2.989418_g62501_i0reverse_frame_1 - 1.5e-09 37.9 4.2 1.6e-09 37.8 4.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 4.5e-08 33.7 0.1 6.6e-08 33.2 0.1 1.3 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.00083 19.1 0.0 0.0011 18.7 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.0014 18.6 0.1 0.0023 17.9 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.0098 16.3 0.0 0.015 15.7 0.0 1.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.015 14.9 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.018 15.0 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain NB-ARC PF00931.22 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.026 13.7 0.0 0.031 13.5 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_22 PF13401.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.055 13.7 0.2 0.082 13.2 0.2 1.3 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.067 13.7 0.0 0.08 13.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.13 12.0 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF3403 PF11883.8 NODE_70433_length_224_cov_3.460317_g62492_i0reverse_frame_1 - 0.043 13.9 0.0 0.066 13.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3403) DUF166 PF02593.14 NODE_70405_length_224_cov_43.248677_g62464_i0forward_frame_1 - 0.1 12.1 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function UCH PF00443.29 NODE_70394_length_224_cov_53.756614_g62453_i0reverse_frame_1 - 0.0017 17.9 0.3 0.0018 17.8 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 NODE_70382_length_224_cov_67.174603_g62441_i0reverse_frame_1 - 0.62 10.4 6.6 2.5 8.5 6.6 1.9 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein Cas_CXXC_CXXC PF09706.10 NODE_70382_length_224_cov_67.174603_g62441_i0forward_frame_1 - 0.042 14.1 0.1 0.066 13.5 0.1 1.4 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) TMEM18 PF14770.6 NODE_70381_length_224_cov_67.433862_g62440_i0forward_frame_1 - 0.0084 16.1 0.2 0.01 15.8 0.2 1.1 1 0 0 1 1 1 1 Transmembrane protein 18 CCDC106 PF15794.5 NODE_70380_length_224_cov_68.333333_g62439_i0reverse_frame_1 - 1.4 8.6 9.9 1.5 8.5 9.9 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Zip PF02535.22 NODE_70380_length_224_cov_68.333333_g62439_i0reverse_frame_1 - 1.6 7.9 4.0 1.6 7.9 4.0 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter CobT PF06213.12 NODE_70380_length_224_cov_68.333333_g62439_i0reverse_frame_1 - 2.3 7.5 8.7 2.5 7.4 8.7 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Presenilin PF01080.17 NODE_70380_length_224_cov_68.333333_g62439_i0reverse_frame_1 - 2.8 6.6 5.8 2.7 6.7 5.8 1.0 1 0 0 1 1 1 0 Presenilin tRNA_lig_CPD PF08302.11 NODE_70379_length_224_cov_73.238095_g62438_i0forward_frame_1 - 8.2e-07 28.7 0.0 8.8e-07 28.6 0.0 1.0 1 0 0 1 1 1 1 Fungal tRNA ligase phosphodiesterase domain Myticin-prepro PF10690.9 NODE_70377_length_224_cov_76.894180_g62436_i0reverse_frame_1 - 4.4 7.6 7.5 0.81 10.0 0.8 1.9 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel HCV_NS5a PF01506.19 NODE_70374_length_224_cov_80.433862_g62433_i0reverse_frame_1 - 3.9 7.4 5.3 1.5 8.8 0.3 2.2 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a protein membrane anchor Albumin_I PF08027.11 NODE_70361_length_224_cov_167.280423_g62420_i0reverse_frame_1 - 0.052 13.2 0.1 8.6 6.1 0.0 2.1 2 0 0 2 2 2 0 Albumin I chain b ETRAMP PF09716.10 NODE_70360_length_224_cov_171.317460_g62419_i0reverse_frame_1 - 0.16 12.1 0.5 0.15 12.1 0.5 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Ferlin_C PF16165.5 NODE_70356_length_224_cov_214.851852_g62415_i0reverse_frame_1 - 0.025 14.5 0.7 0.029 14.3 0.7 1.1 1 0 0 1 1 1 0 Ferlin C-terminus RAMP4 PF06624.12 NODE_70355_length_224_cov_215.597884_g62414_i0forward_frame_1 - 1.3 9.1 5.3 2.1 8.5 5.3 1.3 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Dimer_Tnp_hAT PF05699.14 NODE_70345_length_224_cov_532.137566_g62404_i0reverse_frame_1 - 0.16 11.8 0.4 0.24 11.2 0.2 1.4 1 1 0 1 1 1 0 hAT family C-terminal dimerisation region Ank_4 PF13637.6 NODE_70345_length_224_cov_532.137566_g62404_i0forward_frame_1 - 0.00021 21.8 0.3 0.15 12.7 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_70345_length_224_cov_532.137566_g62404_i0forward_frame_1 - 0.00024 21.6 0.1 0.00038 21.0 0.1 1.3 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_70345_length_224_cov_532.137566_g62404_i0forward_frame_1 - 0.00052 20.2 0.5 0.063 13.9 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat HyaE PF07449.11 NODE_70337_length_225_cov_0.842105_g62396_i0forward_frame_1 - 0.023 14.6 0.0 0.027 14.4 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE HnRNP_M PF11532.8 NODE_70327_length_225_cov_0.921053_g62386_i0reverse_frame_1 - 3.2 8.1 10.1 0.3 11.3 4.2 2.1 2 1 0 2 2 2 0 Heterogeneous nuclear ribonucleoprotein M Guanylate_cyc PF00211.20 NODE_70321_length_225_cov_1.005263_g62380_i0forward_frame_1 - 8.5e-08 32.0 0.0 9e-08 32.0 0.0 1.0 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain RWP-RK PF02042.15 NODE_70318_length_225_cov_1.047368_g62377_i0forward_frame_1 - 0.091 12.8 0.3 12 6.0 0.2 2.2 2 0 0 2 2 2 0 RWP-RK domain Sgf11 PF08209.11 NODE_70307_length_225_cov_1.121053_g62366_i0reverse_frame_1 - 0.014 14.9 0.1 0.026 14.1 0.1 1.4 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) DUF3593 PF12159.8 NODE_70279_length_225_cov_1.294737_g62338_i0forward_frame_1 - 0.33 11.0 3.8 0.42 10.7 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3593) Avl9 PF09794.9 NODE_70275_length_225_cov_1.336842_g62334_i0reverse_frame_1 - 1.3e-08 33.9 0.0 1.4e-08 33.9 0.0 1.0 1 0 0 1 1 1 1 Transport protein Avl9 SPA PF08616.10 NODE_70275_length_225_cov_1.336842_g62334_i0reverse_frame_1 - 0.00079 19.4 0.0 0.0009 19.2 0.0 1.1 1 0 0 1 1 1 1 Stabilization of polarity axis RNA_pol_Rpb2_5 PF04567.17 NODE_70272_length_225_cov_1.363158_g62331_i0reverse_frame_1 - 1.4e-11 44.7 0.0 1.4e-11 44.7 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 CALM_bind PF16025.5 NODE_70270_length_225_cov_1.368421_g62329_i0reverse_frame_1 - 0.06 13.8 0.2 0.086 13.3 0.2 1.2 1 0 0 1 1 1 0 Calcium-dependent calmodulin binding Receptor_2B4 PF11465.8 NODE_70266_length_225_cov_1.378947_g62325_i0forward_frame_1 - 0.0021 18.2 2.5 0.0024 18.0 2.5 1.1 1 0 0 1 1 1 1 Natural killer cell receptor 2B4 DUF1241 PF06840.11 NODE_70262_length_225_cov_1.400000_g62321_i0reverse_frame_1 - 0.00068 19.3 0.0 0.00078 19.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1241) Ank_2 PF12796.7 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 1.1e-11 45.2 0.2 1e-10 42.0 0.2 2.0 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 1.1e-10 41.9 0.5 7.7e-07 29.6 0.1 2.9 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 2.9e-09 36.4 0.8 0.004 17.5 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 2.2e-08 34.1 0.1 0.023 15.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 1.3e-05 25.3 0.1 0.00057 20.1 0.0 2.6 1 1 2 3 3 3 2 Ankyrin repeats (many copies) DUF3447 PF11929.8 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 0.024 14.6 1.2 0.036 14.0 1.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3447) DUF5423 PF17461.2 NODE_70238_length_225_cov_1.573684_g62297_i0reverse_frame_1 - 0.062 12.1 0.0 0.072 11.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5423) EamA PF00892.20 NODE_70237_length_225_cov_1.578947_g62296_i0forward_frame_1 - 0.01 16.0 3.6 0.014 15.6 3.6 1.2 1 0 0 1 1 1 0 EamA-like transporter family DUF417 PF04224.12 NODE_70237_length_225_cov_1.578947_g62296_i0forward_frame_1 - 0.22 11.1 4.0 1.6 8.2 4.0 1.9 1 1 0 1 1 1 0 Protein of unknown function, DUF417 DbpA PF03880.15 NODE_70234_length_225_cov_1.589474_g62293_i0reverse_frame_1 - 0.079 13.0 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 DbpA RNA binding domain TPM_phosphatase PF04536.14 NODE_70234_length_225_cov_1.589474_g62293_i0forward_frame_1 - 0.07 13.3 0.0 0.076 13.2 0.0 1.1 1 0 0 1 1 1 0 TPM domain DXP_synthase_N PF13292.6 NODE_70233_length_225_cov_1.594737_g62292_i0forward_frame_1 - 1.9e-32 112.6 0.4 2e-32 112.5 0.4 1.0 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 NODE_70233_length_225_cov_1.594737_g62292_i0forward_frame_1 - 0.00016 20.7 0.1 0.00016 20.7 0.1 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 NODE_70233_length_225_cov_1.594737_g62292_i0forward_frame_1 - 0.00092 19.0 0.3 0.001 18.9 0.3 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SpoVS PF04232.12 NODE_70233_length_225_cov_1.594737_g62292_i0forward_frame_1 - 0.058 13.1 0.4 0.074 12.8 0.4 1.1 1 0 0 1 1 1 0 Stage V sporulation protein S (SpoVS) Tad PF13400.6 NODE_70231_length_225_cov_1.605263_g62290_i0reverse_frame_1 - 2.2 8.6 5.3 3.5 8.0 5.3 1.3 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like Baculo_11_kDa PF06143.11 NODE_70231_length_225_cov_1.605263_g62290_i0reverse_frame_1 - 5 6.8 11.3 6.4 6.4 11.3 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family TetR_C_3 PF08362.11 NODE_70226_length_225_cov_1.626316_g62285_i0forward_frame_1 - 8.5e-22 77.6 0.0 9.3e-22 77.5 0.0 1.0 1 0 0 1 1 1 1 YcdC-like protein, C-terminal region Tfb2_C PF18307.1 NODE_70221_length_225_cov_1.652632_g62280_i0reverse_frame_1 - 0.047 14.1 0.4 0.047 14.1 0.4 1.4 2 0 0 2 2 2 0 Transcription factor Tfb2 (p52) C-terminal domain PDR_CDR PF06422.12 NODE_70220_length_225_cov_1.652632_g62279_i0reverse_frame_1 - 0.1 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 CDR ABC transporter DUF4713 PF15831.5 NODE_70220_length_225_cov_1.652632_g62279_i0reverse_frame_1 - 1.1 9.7 11.1 15 6.1 11.8 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4713) Androgen_recep PF02166.16 NODE_70220_length_225_cov_1.652632_g62279_i0forward_frame_1 - 0.4 9.5 1.7 0.44 9.3 1.7 1.0 1 0 0 1 1 1 0 Androgen receptor Sid-5 PF17204.3 NODE_70216_length_225_cov_1.678947_g62275_i0reverse_frame_1 - 0.12 12.5 0.3 0.15 12.2 0.3 1.2 1 0 0 1 1 1 0 Sid-5 family OTU PF02338.19 NODE_70211_length_225_cov_1.705263_g62270_i0reverse_frame_1 - 1.5e-07 32.0 0.0 1.9e-07 31.6 0.0 1.1 1 0 0 1 1 1 1 OTU-like cysteine protease Tagatose_6_P_K PF08013.11 NODE_70208_length_225_cov_1.736842_g62267_i0forward_frame_1 - 2.7e-27 95.5 0.0 2.9e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase DUF1509 PF07420.11 NODE_70202_length_225_cov_1.826316_g62261_i0forward_frame_1 - 0.085 11.8 0.5 0.087 11.8 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Ephrin_rec_like PF07699.13 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 5.1e-06 26.2 25.1 7.6e-05 22.4 16.6 2.8 2 2 0 2 2 2 2 Putative ephrin-receptor like TNFR_c6 PF00020.18 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 0.00097 19.5 15.0 0.0033 17.8 6.2 3.3 2 1 1 3 3 3 2 TNFR/NGFR cysteine-rich region CBM_14 PF01607.24 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 0.24 11.6 10.0 2.6 8.3 0.5 3.1 1 1 1 2 2 2 0 Chitin binding Peritrophin-A domain Dickkopf_N PF04706.12 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 0.76 10.3 9.8 2.3 8.8 1.9 3.2 1 1 2 3 3 3 0 Dickkopf N-terminal cysteine-rich region Opy2 PF09463.10 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 1.4 9.3 18.3 36 4.8 15.5 3.3 1 1 1 2 2 2 0 Opy2 protein SK_channel PF03530.14 NODE_70196_length_225_cov_1.889474_g62255_i0reverse_frame_1 - 0.15 12.0 4.6 0.18 11.8 4.6 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel Cytochrome-c551 PF10643.9 NODE_70196_length_225_cov_1.889474_g62255_i0reverse_frame_1 - 0.56 9.8 5.6 0.65 9.5 5.6 1.0 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 CAP PF00188.26 NODE_70194_length_225_cov_1.905263_g62253_i0reverse_frame_1 - 6.1e-05 23.9 0.0 7.2e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Cysteine-rich secretory protein family TFIIE_beta PF02186.15 NODE_70194_length_225_cov_1.905263_g62253_i0reverse_frame_1 - 0.1 12.9 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 TFIIE beta subunit core domain B1 PF02246.15 NODE_70194_length_225_cov_1.905263_g62253_i0reverse_frame_1 - 0.12 12.5 0.1 0.22 11.6 0.1 1.4 1 1 0 1 1 1 0 Protein L b1 domain Aph-1 PF06105.12 NODE_70193_length_225_cov_1.910526_g62252_i0forward_frame_1 - 0.063 12.7 0.1 0.069 12.5 0.1 1.0 1 0 0 1 1 1 0 Aph-1 protein DUF4738 PF15889.5 NODE_70172_length_225_cov_2.247368_g62231_i0forward_frame_1 - 0.025 14.4 0.3 0.028 14.3 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4738) Sex_peptide PF08138.11 NODE_70171_length_225_cov_2.252632_g62230_i0forward_frame_1 - 0.013 15.6 0.8 0.026 14.6 0.2 1.8 1 1 1 2 2 2 0 Sex peptide (SP) family Takusan PF04822.13 NODE_70169_length_225_cov_2.294737_g62228_i0forward_frame_1 - 0.014 15.2 6.0 0.11 12.3 0.4 2.2 2 0 0 2 2 2 0 Takusan Put_Phosphatase PF06888.12 NODE_70169_length_225_cov_2.294737_g62228_i0forward_frame_1 - 0.032 13.6 0.0 0.034 13.6 0.0 1.1 1 0 0 1 1 1 0 Putative Phosphatase DUF4140 PF13600.6 NODE_70169_length_225_cov_2.294737_g62228_i0forward_frame_1 - 1.4 9.4 4.1 6.6 7.2 1.1 2.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF1479 PF07350.12 NODE_70162_length_225_cov_2.373684_g62221_i0forward_frame_1 - 0.17 10.6 0.0 0.18 10.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) Herpes_U30 PF04523.13 NODE_70157_length_225_cov_2.505263_g62216_i0forward_frame_1 - 0.086 10.7 0.2 0.077 10.9 0.2 1.0 1 0 0 1 1 1 0 Herpes virus tegument protein U30 PhnA_Zn_Ribbon PF08274.12 NODE_70153_length_225_cov_2.610526_g62212_i0reverse_frame_1 - 0.004 17.1 1.5 0.0077 16.2 1.5 1.5 1 0 0 1 1 1 1 PhnA Zinc-Ribbon DMAP1_like PF17024.5 NODE_70152_length_225_cov_2.647368_g62211_i0reverse_frame_1 - 0.0033 17.5 1.2 0.0041 17.2 1.2 1.2 1 0 0 1 1 1 1 Putative DMAP1-like Abhydro_lipase PF04083.16 NODE_70147_length_225_cov_2.694737_g62206_i0forward_frame_1 - 0.019 14.5 0.1 0.024 14.2 0.1 1.2 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region DUF705 PF05152.12 NODE_70146_length_225_cov_2.742105_g62205_i0forward_frame_1 - 0.15 11.5 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF705) OST3_OST6 PF04756.13 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_1 - 0.082 12.2 0.1 0.096 12.0 0.1 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family WASH-7_C PF14746.6 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_1 - 0.03 14.0 2.0 0.035 13.8 2.0 1.0 1 0 0 1 1 1 0 WASH complex subunit 7, C-terminal 7TM_GPCR_Srab PF10292.9 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_1 - 0.12 11.3 6.6 0.14 11.1 6.6 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor Peptidase_S41 PF03572.18 NODE_70140_length_225_cov_3.021053_g62199_i0reverse_frame_1 - 4.5e-16 58.9 0.0 5e-16 58.7 0.0 1.0 1 0 0 1 1 1 1 Peptidase family S41 NLBH PF05211.12 NODE_70140_length_225_cov_3.021053_g62199_i0reverse_frame_1 - 0.12 11.9 0.1 0.13 11.8 0.1 1.0 1 0 0 1 1 1 0 Neuraminyllactose-binding hemagglutinin precursor (NLBH) Atrophin-1 PF03154.15 NODE_70139_length_225_cov_3.068421_g62198_i0reverse_frame_1 - 0.066 11.5 3.2 0.057 11.7 3.2 1.1 1 0 0 1 1 1 0 Atrophin-1 family NTP_transferase PF00483.23 NODE_70138_length_225_cov_3.073684_g62197_i0forward_frame_1 - 0.0011 18.6 0.0 0.0011 18.6 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase RNase_PH_C PF03725.15 NODE_70133_length_225_cov_3.252632_g62192_i0reverse_frame_1 - 0.035 14.1 0.0 0.045 13.8 0.0 1.2 1 0 0 1 1 1 0 3' exoribonuclease family, domain 2 Asp_protease_2 PF13650.6 NODE_70133_length_225_cov_3.252632_g62192_i0reverse_frame_1 - 0.056 14.1 0.0 0.07 13.8 0.0 1.2 1 0 0 1 1 1 0 Aspartyl protease gag-asp_proteas PF13975.6 NODE_70133_length_225_cov_3.252632_g62192_i0reverse_frame_1 - 0.15 12.6 0.0 0.19 12.3 0.0 1.2 1 0 0 1 1 1 0 gag-polyprotein putative aspartyl protease DUF2663 PF10864.8 NODE_70125_length_225_cov_3.978947_g62184_i0reverse_frame_1 - 0.06 13.8 1.2 0.063 13.7 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Phage_Gp23 PF10669.9 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_1 - 0.23 11.8 6.8 0.28 11.5 6.8 1.2 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) DUF3915 PF13054.6 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_1 - 6.1 6.8 8.5 3.6 7.6 6.7 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3915) MAP65_ASE1 PF03999.12 NODE_70122_length_225_cov_5.457895_g62181_i0forward_frame_1 - 0.15 10.7 0.3 0.13 10.9 0.3 1.0 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) ABC2_membrane_3 PF12698.7 NODE_70119_length_225_cov_19.947368_g62178_i0reverse_frame_1 - 0.48 9.5 19.7 0.54 9.3 19.7 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Rav1p_C PF12234.8 NODE_70117_length_225_cov_21.631579_g62176_i0reverse_frame_1 - 0.24 9.8 0.1 0.27 9.6 0.1 1.0 1 0 0 1 1 1 0 RAVE protein 1 C terminal LisH PF08513.11 NODE_70116_length_225_cov_23.784211_g62175_i0reverse_frame_1 - 0.0072 16.2 0.3 0.0099 15.8 0.3 1.3 1 0 0 1 1 1 1 LisH FOP_dimer PF09398.10 NODE_70116_length_225_cov_23.784211_g62175_i0reverse_frame_1 - 0.097 12.9 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain Myco_arth_vir_N PF09610.10 NODE_70112_length_225_cov_32.894737_g62171_i0forward_frame_1 - 5.1 7.3 12.5 4.5 7.4 5.6 2.4 2 0 0 2 2 2 0 Mycoplasma virulence signal region (Myco_arth_vir_N) Peptidase_C31 PF05410.13 NODE_70098_length_225_cov_52.226316_g62157_i0forward_frame_1 - 0.11 12.5 0.1 0.39 10.8 0.1 1.8 1 1 0 1 1 1 0 Porcine arterivirus-type cysteine proteinase alpha AbLIM_anchor PF16182.5 NODE_70092_length_225_cov_58.300000_g62151_i0reverse_frame_1 - 0.021 14.7 0.6 0.023 14.5 0.6 1.1 1 0 0 1 1 1 0 Putative adherens-junction anchoring region of AbLIM SAM_Exu PF18609.1 NODE_70086_length_225_cov_68.373684_g62145_i0reverse_frame_1 - 0.074 13.2 0.2 0.1 12.7 0.2 1.3 1 0 0 1 1 1 0 Exuperantia SAM-like domain RE_Eco47II PF09553.10 NODE_70079_length_225_cov_81.505263_g62138_i0forward_frame_1 - 0.11 12.0 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Eco47II restriction endonuclease zf_C2HC_14 PF18574.1 NODE_70075_length_225_cov_88.657895_g62134_i0forward_frame_1 - 0.15 11.9 0.1 0.23 11.3 0.1 1.2 1 0 0 1 1 1 0 C2HC Zing finger domain V_ATPase_I PF01496.19 NODE_70060_length_225_cov_133.452632_g62119_i0forward_frame_1 - 2 6.2 3.1 2.3 6.0 3.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CelTOS PF18659.1 NODE_70058_length_225_cov_159.194737_g62117_i0reverse_frame_1 - 0.096 13.1 1.3 0.11 13.0 1.3 1.1 1 0 0 1 1 1 0 Cell-traversal protein for ookinetes and sporozoites DUF702 PF05142.12 NODE_70055_length_225_cov_198.531579_g62114_i0forward_frame_1 - 0.015 15.8 5.4 0.019 15.5 5.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF702) PgaD PF13994.6 NODE_70051_length_225_cov_409.215789_g62110_i0forward_frame_1 - 0.13 12.3 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 PgaD-like protein MORN PF02493.20 NODE_70050_length_225_cov_412.800000_g62109_i0reverse_frame_1 - 0.0037 17.1 9.2 0.0087 15.9 1.8 3.4 3 1 0 3 3 3 2 MORN repeat DUF1391 PF07151.12 NODE_70050_length_225_cov_412.800000_g62109_i0reverse_frame_1 - 0.067 13.0 0.1 0.092 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1391) Glyco_hydro_127 PF07944.12 NODE_70047_length_225_cov_1355.284211_g62106_i0forward_frame_1 - 0.25 9.8 1.5 0.3 9.5 1.5 1.1 1 0 0 1 1 1 0 Beta-L-arabinofuranosidase, GH127 2TM PF13239.6 NODE_70024_length_226_cov_1.083770_g62083_i0forward_frame_2 - 0.08 13.3 2.0 0.099 13.0 2.0 1.1 1 0 0 1 1 1 0 2TM domain Exo84_C PF16528.5 NODE_70024_length_226_cov_1.083770_g62083_i0forward_frame_2 - 0.09 12.6 0.5 0.1 12.4 0.5 1.1 1 0 0 1 1 1 0 Exocyst component 84 C-terminal Trypan_PARP PF05887.11 NODE_70021_length_226_cov_1.094241_g62080_i0reverse_frame_3 - 0.074 13.0 5.0 0.073 13.1 5.0 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) FA_desaturase PF00487.24 NODE_70021_length_226_cov_1.094241_g62080_i0forward_frame_2 - 4.2 7.1 5.2 4.1 7.2 5.2 1.0 1 0 0 1 1 1 0 Fatty acid desaturase PyocinActivator PF11112.8 NODE_70016_length_226_cov_1.146597_g62075_i0reverse_frame_3 - 0.015 15.4 0.1 0.024 14.8 0.1 1.3 1 0 0 1 1 1 0 Pyocin activator protein PrtN partial_CstF PF15861.5 NODE_70015_length_226_cov_1.151832_g62074_i0reverse_frame_3 - 0.004 16.9 0.0 0.0049 16.6 0.0 1.1 1 0 0 1 1 1 1 Partial cleavage stimulation factor domain Chor_lyase PF04345.13 NODE_70013_length_226_cov_1.151832_g62072_i0forward_frame_3 - 0.011 15.4 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Chorismate lyase Lamprin PF06403.11 NODE_70010_length_226_cov_1.172775_g62069_i0forward_frame_3 - 0.14 12.1 4.3 0.3 11.1 4.3 1.6 1 1 0 1 1 1 0 Lamprin Emaravirus_P4 PF16505.5 NODE_70009_length_226_cov_1.178010_g62068_i0forward_frame_2 - 0.059 12.4 0.1 0.065 12.3 0.1 1.1 1 0 0 1 1 1 0 P4 movement protein of Emaravirus, and the 30K superfamily Glyco_transf_36 PF06165.11 NODE_70008_length_226_cov_1.183246_g62067_i0reverse_frame_3 - 0.1 12.0 0.0 0.1 12.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 36 Tnp_DNA_bind PF14706.6 NODE_70004_length_226_cov_1.235602_g62063_i0forward_frame_2 - 0.29 11.0 3.3 0.35 10.8 1.1 2.0 2 0 0 2 2 2 0 Transposase DNA-binding MarR PF01047.22 NODE_70001_length_226_cov_1.246073_g62060_i0reverse_frame_3 - 0.031 14.2 0.1 0.049 13.6 0.1 1.3 1 0 0 1 1 1 0 MarR family DUF1712 PF08217.11 NODE_70000_length_226_cov_1.251309_g62059_i0forward_frame_3 - 0.056 11.9 0.1 0.062 11.8 0.1 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1712) dCMP_cyt_deam_2 PF08211.12 NODE_69998_length_226_cov_1.251309_g62057_i0reverse_frame_2 - 0.18 12.0 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region Mtd_N PF18454.1 NODE_69997_length_226_cov_1.256545_g62056_i0reverse_frame_2 - 0.0029 17.6 0.0 0.0045 17.0 0.0 1.3 1 0 0 1 1 1 1 Major tropism determinant N-terminal domain DUF5555 PF17710.1 NODE_69997_length_226_cov_1.256545_g62056_i0forward_frame_3 - 0.01 15.4 1.7 0.012 15.2 1.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5555) WD40 PF00400.32 NODE_69996_length_226_cov_1.256545_g62055_i0forward_frame_3 - 1.8e-15 57.0 2.4 4.5e-10 39.9 0.5 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat Ge1_WD40 PF16529.5 NODE_69996_length_226_cov_1.256545_g62055_i0forward_frame_3 - 0.022 13.7 0.0 0.98 8.3 0.0 2.0 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 NODE_69996_length_226_cov_1.256545_g62055_i0forward_frame_3 - 0.024 15.0 0.0 0.19 12.1 0.0 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain FliO PF04347.13 NODE_69993_length_226_cov_1.256545_g62052_i0forward_frame_3 - 0.15 12.4 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Flagellar biosynthesis protein, FliO Ovate PF04844.13 NODE_69986_length_226_cov_1.345550_g62045_i0forward_frame_2 - 0.064 13.3 0.0 0.088 12.8 0.0 1.2 1 0 0 1 1 1 0 Transcriptional repressor, ovate MFS_1 PF07690.16 NODE_69980_length_226_cov_1.429319_g62039_i0forward_frame_3 - 2.5e-06 26.7 0.4 3.3e-06 26.3 0.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1514 PF07438.11 NODE_69972_length_226_cov_1.492147_g62031_i0forward_frame_2 - 0.32 10.9 4.9 0.49 10.3 3.4 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1514) DUF236 PF03057.14 NODE_69971_length_226_cov_1.507853_g62030_i0forward_frame_3 - 0.2 11.7 0.1 0.26 11.3 0.1 1.1 1 0 0 1 1 1 0 DUF236 repeat APC1_C PF18122.1 NODE_69968_length_226_cov_1.528796_g62027_i0reverse_frame_3 - 0.019 14.9 0.4 0.021 14.8 0.4 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex sub unit 1 C-terminal domain RED_N PF07808.13 NODE_69968_length_226_cov_1.528796_g62027_i0forward_frame_3 - 0.045 13.3 0.1 0.051 13.2 0.1 1.1 1 0 0 1 1 1 0 RED-like protein N-terminal region LRV PF01816.17 NODE_69965_length_226_cov_1.565445_g62024_i0forward_frame_2 - 0.058 13.8 0.5 0.058 13.8 0.5 2.1 2 0 0 2 2 2 0 Leucine rich repeat variant ImpA_N PF06812.12 NODE_69950_length_226_cov_1.670157_g62009_i0reverse_frame_2 - 0.12 12.5 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 ImpA, N-terminal, type VI secretion system MOZART2 PF12926.7 NODE_69948_length_226_cov_1.675393_g62007_i0forward_frame_3 - 0.075 12.7 0.2 0.11 12.1 0.2 1.3 1 0 0 1 1 1 0 Mitotic-spindle organizing gamma-tubulin ring associated RuBisCo_chap_C PF18087.1 NODE_69947_length_226_cov_1.675393_g62006_i0forward_frame_2 - 0.095 12.4 0.0 0.095 12.4 0.0 1.1 1 0 0 1 1 1 0 Rubisco Assembly chaperone C-terminal domain Ion_trans PF00520.31 NODE_69941_length_226_cov_1.722513_g62000_i0forward_frame_2 - 0.045 13.0 2.2 0.05 12.8 2.2 1.1 1 0 0 1 1 1 0 Ion transport protein UDPG_MGDP_dh_N PF03721.14 NODE_69939_length_226_cov_1.738220_g61998_i0forward_frame_2 - 0.048 13.2 0.1 0.055 13.0 0.1 1.1 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Inhibitor_I29 PF08246.12 NODE_69937_length_226_cov_1.753927_g61996_i0reverse_frame_3 - 0.03 14.8 1.3 0.042 14.3 1.3 1.2 1 0 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) NECFESHC PF16621.5 NODE_69933_length_226_cov_1.790576_g61992_i0reverse_frame_2 - 0.13 12.2 0.7 0.23 11.4 0.7 1.4 1 0 0 1 1 1 0 SH3 terminal domain of 2nd SH3 on Neutrophil cytosol factor 1 DUF4534 PF15049.6 NODE_69930_length_226_cov_1.811518_g61989_i0reverse_frame_3 - 0.049 13.4 0.0 0.061 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4534) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks323.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks323.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks323.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks323.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ABC2_membrane_3 PF12698.7 NODE_69927_length_226_cov_1.874346_g61986_i0reverse_frame_2 - 3.5e-05 23.1 0.3 3.5e-05 23.1 0.3 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein EptA_B_N PF08019.12 NODE_69927_length_226_cov_1.874346_g61986_i0reverse_frame_2 - 0.061 13.2 0.1 0.067 13.1 0.1 1.0 1 0 0 1 1 1 0 Phosphoethanolamine transferase EptA/EptB DUF809 PF05663.11 NODE_69927_length_226_cov_1.874346_g61986_i0forward_frame_3 - 0.34 11.0 0.8 0.51 10.5 0.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF809) DUF4305 PF14146.6 NODE_69926_length_226_cov_1.879581_g61985_i0reverse_frame_2 - 0.096 12.9 1.7 0.18 12.0 1.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4305) Imm32 PF15566.6 NODE_69924_length_226_cov_1.890052_g61983_i0forward_frame_2 - 0.013 15.3 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 32 Porin_10 PF14121.6 NODE_69923_length_226_cov_1.905759_g61982_i0reverse_frame_2 - 0.0025 16.5 0.3 0.0025 16.5 0.3 1.0 1 0 0 1 1 1 1 Putative porin Borrelia_orfX PF04160.12 NODE_69920_length_226_cov_1.947644_g61979_i0forward_frame_2 - 0.01 15.9 0.7 0.01 15.8 0.7 1.1 1 0 0 1 1 1 0 Orf-X protein Hist_deacetyl PF00850.19 NODE_69918_length_226_cov_1.979058_g61977_i0forward_frame_2 - 5.4e-22 78.6 0.0 5.7e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain PspC PF04024.12 NODE_69917_length_226_cov_1.979058_g61976_i0forward_frame_3 - 0.096 12.5 0.2 0.13 12.1 0.2 1.2 1 0 0 1 1 1 0 PspC domain DUF3099 PF11298.8 NODE_69913_length_226_cov_2.089005_g61972_i0reverse_frame_3 - 0.012 15.8 0.0 0.019 15.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) UPF0114 PF03350.16 NODE_69911_length_226_cov_2.146597_g61970_i0forward_frame_2 - 0.076 13.2 0.1 0.088 13.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 DUF5433 PF17498.2 NODE_69910_length_226_cov_2.172775_g61969_i0forward_frame_2 - 0.26 11.5 7.1 4.7 7.5 7.1 2.3 1 1 0 1 1 1 0 Family of unknown function (DUF5433) PsbT PF01405.17 NODE_69908_length_226_cov_2.188482_g61967_i0reverse_frame_2 - 0.073 12.9 0.4 0.12 12.2 0.4 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre T protein AChE_tetra PF08674.10 NODE_69907_length_226_cov_2.193717_g61966_i0forward_frame_3 - 0.045 13.5 1.8 0.13 11.9 1.2 2.0 1 1 1 2 2 2 0 Acetylcholinesterase tetramerisation domain Ribonuc_red_sm PF00268.21 NODE_69904_length_226_cov_2.235602_g61963_i0reverse_frame_3 - 1.7e-12 47.4 0.4 1.8e-12 47.3 0.4 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Ubiquitin_4 PF18036.1 NODE_69900_length_226_cov_2.298429_g61959_i0forward_frame_2 - 0.0086 16.1 0.0 0.0091 16.0 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain CDP-OH_P_transf PF01066.21 NODE_69899_length_226_cov_2.319372_g61958_i0forward_frame_3 - 0.041 14.6 0.2 0.055 14.3 0.2 1.3 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase DHO_dh PF01180.21 NODE_69896_length_226_cov_2.413613_g61955_i0forward_frame_3 - 5e-14 52.2 0.0 5.4e-14 52.1 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase DUF2109 PF09882.9 NODE_69895_length_226_cov_2.465969_g61954_i0forward_frame_2 - 0.76 9.8 8.0 1.4 9.0 7.2 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2109) H2O2_YaaD PF03883.14 NODE_69894_length_226_cov_2.492147_g61953_i0forward_frame_3 - 0.19 11.2 0.0 0.2 11.2 0.0 1.0 1 0 0 1 1 1 0 Peroxide stress protein YaaA Pkinase PF00069.25 NODE_69888_length_226_cov_2.675393_g61947_i0reverse_frame_2 - 0.032 13.6 0.0 0.037 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Pox_TAA1 PF03295.14 NODE_69887_length_226_cov_2.712042_g61946_i0reverse_frame_3 - 0.0016 18.3 0.0 0.0022 17.9 0.0 1.2 1 0 0 1 1 1 1 Poxvirus trans-activator protein A1 C-terminal HTH_OrfB_IS605 PF12323.8 NODE_69887_length_226_cov_2.712042_g61946_i0reverse_frame_3 - 0.038 13.5 0.3 0.053 13.0 0.3 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain MFS_1 PF07690.16 NODE_69883_length_226_cov_2.743455_g61942_i0reverse_frame_2 - 4.3e-08 32.5 0.2 4.8e-08 32.3 0.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Raf1_HTH PF18579.1 NODE_69883_length_226_cov_2.743455_g61942_i0reverse_frame_2 - 0.011 15.4 0.0 0.017 14.8 0.0 1.3 1 0 0 1 1 1 0 Rubisco accumulation factor 1 helix turn helix domain AAA PF00004.29 NODE_69882_length_226_cov_2.748691_g61941_i0forward_frame_2 - 3.2e-16 60.0 0.1 3.6e-16 59.8 0.1 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF3437 PF11919.8 NODE_69880_length_226_cov_2.874346_g61939_i0reverse_frame_2 - 0.067 13.1 0.0 0.074 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DUF3379 PF11859.8 NODE_69879_length_226_cov_2.884817_g61938_i0forward_frame_3 - 0.084 12.2 0.1 0.1 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) IF2_N PF04760.15 NODE_69879_length_226_cov_2.884817_g61938_i0forward_frame_3 - 0.098 12.5 0.3 3.1 7.7 0.1 2.2 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region Lipid_bd PF12888.7 NODE_69878_length_226_cov_2.916230_g61937_i0reverse_frame_2 - 0.03 14.7 0.1 0.035 14.5 0.1 1.1 1 0 0 1 1 1 0 Lipid-binding putative hydrolase tRNA-synt_2_TM PF16995.5 NODE_69876_length_226_cov_2.963351_g61935_i0reverse_frame_3 - 0.038 13.7 1.0 0.041 13.6 1.0 1.1 1 0 0 1 1 1 0 Transmembrane region of lysyl-tRNA synthetase Fer4_21 PF14697.6 NODE_69876_length_226_cov_2.963351_g61935_i0reverse_frame_2 - 0.011 15.9 0.1 0.014 15.5 0.1 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.27 NODE_69876_length_226_cov_2.963351_g61935_i0reverse_frame_2 - 0.027 14.3 0.9 0.039 13.8 0.9 1.3 1 0 0 1 1 1 0 4Fe-4S binding domain DUF4315 PF14193.6 NODE_69872_length_226_cov_3.314136_g61931_i0reverse_frame_3 - 0.001 19.1 2.6 0.0017 18.3 2.2 1.5 1 1 1 2 2 2 1 Domain of unknown function (DUF4315) Herpes_UL6 PF01763.16 NODE_69872_length_226_cov_3.314136_g61931_i0reverse_frame_3 - 0.018 13.6 1.2 0.018 13.6 1.2 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like DUF4094 PF13334.6 NODE_69872_length_226_cov_3.314136_g61931_i0reverse_frame_3 - 0.029 14.8 1.3 0.034 14.6 1.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) TcdB_N PF12918.7 NODE_69872_length_226_cov_3.314136_g61931_i0reverse_frame_3 - 0.033 14.5 0.6 0.066 13.5 0.7 1.6 1 1 0 1 1 1 0 TcdB toxin N-terminal helical domain Nup54 PF13874.6 NODE_69872_length_226_cov_3.314136_g61931_i0reverse_frame_3 - 0.041 14.0 0.4 0.11 12.6 0.4 1.6 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 GPS2_interact PF15784.5 NODE_69872_length_226_cov_3.314136_g61931_i0reverse_frame_3 - 0.085 13.3 2.3 0.1 13.0 2.3 1.1 1 0 0 1 1 1 0 G-protein pathway suppressor 2-interacting domain Rad54_N PF08658.10 NODE_69868_length_226_cov_4.261780_g61927_i0forward_frame_3 - 0.16 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Rad54 N terminal IMD PF08397.11 NODE_69867_length_226_cov_4.329843_g61926_i0reverse_frame_2 - 0.044 13.2 1.6 0.046 13.1 1.6 1.1 1 0 0 1 1 1 0 IRSp53/MIM homology domain Flu_B_M2 PF04772.12 NODE_69867_length_226_cov_4.329843_g61926_i0reverse_frame_2 - 0.05 13.8 1.2 0.094 13.0 1.2 1.5 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) TMCO5 PF14992.6 NODE_69867_length_226_cov_4.329843_g61926_i0reverse_frame_2 - 0.052 13.1 3.5 0.053 13.1 3.5 1.0 1 0 0 1 1 1 0 TMCO5 family Clathrin-link PF09268.10 NODE_69867_length_226_cov_4.329843_g61926_i0forward_frame_3 - 0.15 11.5 0.1 0.2 11.0 0.1 1.2 1 0 0 1 1 1 0 Clathrin, heavy-chain linker ChAPs PF09295.10 NODE_69858_length_226_cov_21.643979_g61917_i0reverse_frame_3 - 0.18 10.7 0.0 0.19 10.7 0.0 1.0 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) GlyL_C PF12524.8 NODE_69857_length_226_cov_22.675393_g61916_i0forward_frame_2 - 0.053 13.7 2.8 0.16 12.1 0.9 2.0 1 1 1 2 2 2 0 dsDNA virus glycoprotein L C terminal zf-rbx1 PF12678.7 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 0.0031 17.8 0.3 0.0045 17.2 0.3 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 0.0048 16.7 0.5 0.0074 16.1 0.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 0.0091 16.3 0.3 0.013 15.8 0.3 1.2 1 0 0 1 1 1 1 Ring finger domain HNH_2 PF13391.6 NODE_69844_length_226_cov_42.832461_g61903_i0forward_frame_3 - 0.98 9.6 5.0 2.5 8.3 0.2 2.3 1 1 1 2 2 2 0 HNH endonuclease DUF765 PF05570.11 NODE_69842_length_226_cov_44.392670_g61901_i0reverse_frame_3 - 0.093 12.9 0.5 0.093 12.9 0.5 2.2 2 0 0 2 2 2 0 Circovirus protein of unknown function (DUF765) zf-U1 PF06220.12 NODE_69840_length_226_cov_46.910995_g61899_i0reverse_frame_2 - 0.026 14.3 0.6 0.18 11.6 0.3 2.0 2 0 0 2 2 2 0 U1 zinc finger PhoLip_ATPase_N PF16209.5 NODE_69835_length_226_cov_50.570681_g61894_i0reverse_frame_3 - 2.6 7.8 8.7 0.41 10.4 0.3 2.4 1 1 2 3 3 3 0 Phospholipid-translocating ATPase N-terminal VQ PF05678.14 NODE_69828_length_226_cov_57.157068_g61887_i0reverse_frame_2 - 0.066 12.7 0.1 0.11 12.0 0.1 1.4 1 0 0 1 1 1 0 VQ motif EF-hand_8 PF13833.6 NODE_69827_length_226_cov_57.193717_g61886_i0reverse_frame_2 - 0.00065 19.5 1.0 0.00076 19.3 1.0 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 NODE_69827_length_226_cov_57.193717_g61886_i0reverse_frame_2 - 0.047 14.1 0.3 0.053 14.0 0.3 1.1 1 0 0 1 1 1 0 EF-hand domain pair Peptidase_C1 PF00112.23 NODE_69826_length_226_cov_57.575916_g61885_i0forward_frame_3 - 3.5e-08 33.8 0.5 3.8e-08 33.7 0.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_69826_length_226_cov_57.575916_g61885_i0forward_frame_3 - 0.0018 17.1 0.4 0.0019 17.1 0.4 1.0 1 0 0 1 1 1 1 Peptidase C1-like family MPM1 PF17234.2 NODE_69825_length_226_cov_58.827225_g61884_i0forward_frame_3 - 0.14 12.4 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 tRNA_U5-meth_tr PF05958.11 NODE_69815_length_226_cov_80.890052_g61874_i0forward_frame_2 - 1.5e-05 24.2 0.0 1.9e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase DUF2706 PF10913.8 NODE_69814_length_226_cov_81.769634_g61873_i0forward_frame_3 - 0.39 10.6 5.4 0.29 11.0 3.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2706) DUF3409 PF11889.8 NODE_69810_length_226_cov_86.926702_g61869_i0forward_frame_2 - 0.089 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3409) KCH PF16944.5 NODE_69810_length_226_cov_86.926702_g61869_i0forward_frame_2 - 0.21 11.3 0.5 0.25 11.1 0.5 1.1 1 0 0 1 1 1 0 Fungal potassium channel DUF2859 PF11072.8 NODE_69809_length_226_cov_90.643979_g61868_i0forward_frame_3 - 0.096 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) Herpes_IE68 PF02479.16 NODE_69807_length_226_cov_92.465969_g61866_i0reverse_frame_2 - 0.079 12.6 0.1 0.086 12.4 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus immediate early protein SWIM PF04434.17 NODE_69806_length_226_cov_97.465969_g61865_i0reverse_frame_2 - 0.071 12.8 1.6 0.12 12.0 1.6 1.4 1 0 0 1 1 1 0 SWIM zinc finger UL40 PF10682.9 NODE_69803_length_226_cov_120.057592_g61862_i0reverse_frame_3 - 0.13 11.9 3.6 0.14 11.8 3.6 1.0 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 Toxin_35 PF10530.9 NODE_69803_length_226_cov_120.057592_g61862_i0forward_frame_2 - 0.044 13.8 2.9 0.055 13.4 2.9 1.2 1 0 0 1 1 1 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold PPR_2 PF13041.6 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.0004 20.5 0.0 0.051 13.8 0.0 2.4 1 1 1 2 2 2 2 PPR repeat family PPR PF01535.20 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.00052 20.1 0.0 0.027 14.7 0.0 2.2 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.0021 17.7 0.0 0.13 12.0 0.0 2.6 3 0 0 3 3 3 1 PPR repeat PPR_3 PF13812.6 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.0037 17.3 0.0 0.53 10.4 0.0 2.2 1 1 1 2 2 2 2 Pentatricopeptide repeat domain TPR_8 PF13181.6 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.056 13.7 0.7 0.16 12.2 0.1 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.35 11.5 3.7 3 8.6 0.4 2.3 1 1 1 2 2 2 0 Tetratricopeptide repeat SpdB PF05122.13 NODE_69797_length_226_cov_204.136126_g61856_i0reverse_frame_3 - 0.11 12.7 0.6 0.11 12.7 0.6 1.6 2 0 0 2 2 2 0 Mobile element transfer protein IQCJ-SCHIP1 PF15157.6 NODE_69797_length_226_cov_204.136126_g61856_i0forward_frame_3 - 0.2 11.5 0.1 0.21 11.4 0.1 1.1 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif HTS PF04204.16 NODE_69796_length_226_cov_211.502618_g61855_i0reverse_frame_2 - 0.18 10.7 0.0 0.21 10.5 0.0 1.0 1 0 0 1 1 1 0 Homoserine O-succinyltransferase NdhL PF10716.9 NODE_69796_length_226_cov_211.502618_g61855_i0forward_frame_2 - 6 6.9 7.2 8.7 6.4 7.2 1.3 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit Lambda_CIII PF02061.16 NODE_69786_length_227_cov_0.828125_g61845_i0reverse_frame_2 - 0.04 14.0 0.2 0.069 13.2 0.2 1.4 1 0 0 1 1 1 0 Lambda Phage CIII DUF1911 PF08929.10 NODE_69782_length_227_cov_0.833333_g61841_i0reverse_frame_2 - 0.069 14.0 1.8 0.085 13.7 1.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1911) Caskin-Pro-rich PF16907.5 NODE_69778_length_227_cov_0.875000_g61837_i0forward_frame_3 - 0.12 12.9 0.4 0.14 12.7 0.4 1.0 1 0 0 1 1 1 0 Proline rich region of Caskin proteins DUF4513 PF14983.6 NODE_69776_length_227_cov_0.901042_g61835_i0reverse_frame_2 - 0.12 12.5 0.0 0.14 12.3 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4513) DUF3552 PF12072.8 NODE_69773_length_227_cov_0.942708_g61832_i0forward_frame_3 - 0.18 11.2 17.6 0.21 11.0 17.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) MPS2 PF17060.5 NODE_69773_length_227_cov_0.942708_g61832_i0forward_frame_3 - 0.32 10.2 8.9 0.38 10.0 8.9 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 Atg14 PF10186.9 NODE_69773_length_227_cov_0.942708_g61832_i0forward_frame_3 - 0.89 8.6 10.6 0.97 8.5 10.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 AAA_23 PF13476.6 NODE_69773_length_227_cov_0.942708_g61832_i0forward_frame_3 - 7.8 6.9 13.7 8.3 6.9 13.7 1.1 1 0 0 1 1 1 0 AAA domain Fungal_trans PF04082.18 NODE_69768_length_227_cov_0.994792_g61827_i0forward_frame_2 - 0.068 12.2 0.4 0.07 12.2 0.4 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain CxC6 PF18721.1 NODE_69764_length_227_cov_1.041667_g61823_i0reverse_frame_3 - 0.084 13.1 0.2 0.1 12.9 0.2 1.2 1 0 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases T4-Gluco-transf PF09198.10 NODE_69762_length_227_cov_1.119792_g61821_i0forward_frame_3 - 0.026 14.1 0.0 0.052 13.2 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase Paramyxo_NS_C PF02725.14 NODE_69760_length_227_cov_1.151042_g61819_i0forward_frame_3 - 0.55 10.3 3.6 0.61 10.2 3.6 1.1 1 0 0 1 1 1 0 Non-structural protein C zf-C5HC2 PF02928.16 NODE_69759_length_227_cov_1.192708_g61818_i0reverse_frame_3 - 0.059 13.8 3.5 0.059 13.8 3.5 1.5 2 0 0 2 2 2 0 C5HC2 zinc finger PIN_12 PF16289.5 NODE_69757_length_227_cov_1.229167_g61816_i0forward_frame_2 - 0.024 15.2 0.4 0.025 15.1 0.4 1.0 1 0 0 1 1 1 0 PIN domain Med10 PF09748.9 NODE_69750_length_227_cov_1.244792_g61809_i0forward_frame_3 - 0.019 15.0 0.1 0.02 14.9 0.1 1.0 1 0 0 1 1 1 0 Transcription factor subunit Med10 of Mediator complex PPDK_N PF01326.19 NODE_69750_length_227_cov_1.244792_g61809_i0forward_frame_3 - 0.15 11.3 0.1 0.17 11.1 0.1 1.0 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DUF1996 PF09362.10 NODE_69746_length_227_cov_1.250000_g61805_i0forward_frame_2 - 0.18 11.8 0.0 0.18 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1996) DUF3439 PF11921.8 NODE_69744_length_227_cov_1.250000_g61803_i0reverse_frame_3 - 0.11 12.5 2.8 0.13 12.3 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) RPN1_C PF18051.1 NODE_69744_length_227_cov_1.250000_g61803_i0forward_frame_3 - 0.14 12.3 0.7 0.19 11.8 0.7 1.3 1 0 0 1 1 1 0 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal Adeno_PV PF03910.13 NODE_69744_length_227_cov_1.250000_g61803_i0forward_frame_3 - 0.18 10.5 0.2 0.22 10.2 0.2 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV DUF2070 PF09843.9 NODE_69736_length_227_cov_1.322917_g61795_i0reverse_frame_3 - 0.24 9.7 6.5 0.27 9.5 6.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Tex_N PF09371.10 NODE_69731_length_227_cov_1.354167_g61790_i0reverse_frame_3 - 0.19 11.4 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 Tex-like protein N-terminal domain HEAT_2 PF13646.6 NODE_69731_length_227_cov_1.354167_g61790_i0forward_frame_3 - 0.0015 18.9 0.3 0.0019 18.5 0.3 1.2 1 0 0 1 1 1 1 HEAT repeats HEAT_PBS PF03130.16 NODE_69731_length_227_cov_1.354167_g61790_i0forward_frame_3 - 0.088 13.5 0.8 0.088 13.5 0.8 2.0 2 0 0 2 2 2 0 PBS lyase HEAT-like repeat DUF870 PF05912.11 NODE_69729_length_227_cov_1.385417_g61788_i0reverse_frame_2 - 0.049 13.6 0.5 0.05 13.6 0.5 1.1 1 0 0 1 1 1 0 Caenorhabditis elegans protein of unknown function (DUF870) DUF3938 PF13074.6 NODE_69729_length_227_cov_1.385417_g61788_i0forward_frame_2 - 0.035 14.3 1.1 0.043 14.0 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3938) ARL2_Bind_BART PF11527.8 NODE_69728_length_227_cov_1.395833_g61787_i0reverse_frame_2 - 0.00057 20.0 0.5 0.00081 19.5 0.5 1.3 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART DUF2791 PF10923.8 NODE_69728_length_227_cov_1.395833_g61787_i0reverse_frame_2 - 0.13 11.0 0.7 0.15 10.8 0.7 1.0 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) Imm17 PF15562.6 NODE_69725_length_227_cov_1.416667_g61784_i0forward_frame_3 - 0.073 12.9 3.4 0.078 12.8 2.7 1.5 1 1 0 1 1 1 0 Immunity protein 17 CdiI_N PF18228.1 NODE_69723_length_227_cov_1.447917_g61782_i0reverse_frame_2 - 0.048 13.5 0.2 0.064 13.1 0.2 1.2 1 0 0 1 1 1 0 CdiI N-terminal domain SLATT_5 PF18160.1 NODE_69721_length_227_cov_1.453125_g61780_i0reverse_frame_2 - 0.08 12.3 4.6 0.097 12.0 4.6 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 HTH_54 PF18607.1 NODE_69721_length_227_cov_1.453125_g61780_i0forward_frame_3 - 0.018 15.1 0.1 0.028 14.5 0.1 1.4 1 1 0 1 1 1 0 ParA helix turn helix domain Chisel PF15355.6 NODE_69717_length_227_cov_1.510417_g61776_i0reverse_frame_2 - 0.082 13.1 0.0 0.092 13.0 0.0 1.1 1 0 0 1 1 1 0 Stretch-responsive small skeletal muscle X protein, Chisel Dexa_ind PF15198.6 NODE_69716_length_227_cov_1.510417_g61775_i0reverse_frame_3 - 0.51 10.5 2.3 0.38 10.9 0.3 1.7 1 1 1 2 2 2 0 Dexamethasone-induced Acyltransferase PF01553.21 NODE_69713_length_227_cov_1.552083_g61772_i0reverse_frame_3 - 8.1e-10 38.4 0.0 8.6e-10 38.4 0.0 1.0 1 0 0 1 1 1 1 Acyltransferase zf-CCHC_4 PF14392.6 NODE_69712_length_227_cov_1.552083_g61771_i0forward_frame_2 - 0.0014 18.3 1.3 0.002 17.8 1.3 1.3 1 0 0 1 1 1 1 Zinc knuckle Baculo_11_kDa PF06143.11 NODE_69711_length_227_cov_1.552083_g61770_i0forward_frame_3 - 0.0028 17.2 0.4 0.0034 16.9 0.4 1.2 1 0 0 1 1 1 1 Baculovirus 11 kDa family Shisa PF13908.6 NODE_69711_length_227_cov_1.552083_g61770_i0forward_frame_3 - 0.0067 16.7 0.0 0.0069 16.6 0.0 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Sigma_reg_N PF13800.6 NODE_69711_length_227_cov_1.552083_g61770_i0forward_frame_3 - 0.066 13.5 0.4 0.086 13.1 0.4 1.3 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF4834 PF16118.5 NODE_69711_length_227_cov_1.552083_g61770_i0forward_frame_3 - 0.067 14.2 0.0 0.082 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4359 PF14271.6 NODE_69710_length_227_cov_1.578125_g61769_i0reverse_frame_2 - 0.026 15.3 0.2 0.026 15.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4359) MFS_1 PF07690.16 NODE_69709_length_227_cov_1.578125_g61768_i0reverse_frame_3 - 0.021 13.8 6.3 0.024 13.6 6.3 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF1375 PF07119.12 NODE_69709_length_227_cov_1.578125_g61768_i0forward_frame_2 - 0.051 14.0 0.2 0.067 13.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1375) Toxin_25 PF08095.11 NODE_69707_length_227_cov_1.588542_g61766_i0forward_frame_2 - 0.04 13.9 0.2 0.06 13.3 0.2 1.3 1 0 0 1 1 1 0 Hefutoxin family Wound_ind PF08186.11 NODE_69703_length_227_cov_1.604167_g61762_i0reverse_frame_3 - 0.084 13.3 0.1 0.12 12.8 0.1 1.3 1 0 0 1 1 1 0 Wound-inducible basic protein family Ubiq_cyt_C_chap PF03981.12 NODE_69702_length_227_cov_1.614583_g61761_i0reverse_frame_2 - 0.068 13.3 0.6 0.083 13.0 0.6 1.0 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone DUF2009 PF09418.10 NODE_69701_length_227_cov_1.619792_g61760_i0reverse_frame_2 - 0.1 11.7 0.1 0.12 11.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2009) DUF2089 PF09862.9 NODE_69700_length_227_cov_1.630208_g61759_i0forward_frame_2 - 0.01 15.8 0.6 0.012 15.7 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) Ion_trans PF00520.31 NODE_69697_length_227_cov_1.645833_g61756_i0forward_frame_2 - 0.15 11.3 1.4 1 8.6 0.1 2.0 1 1 1 2 2 2 0 Ion transport protein Bac_DnaA_C PF08299.11 NODE_69694_length_227_cov_1.666667_g61753_i0forward_frame_2 - 0.051 13.6 0.5 0.17 11.9 0.1 1.9 1 1 1 2 2 2 0 Bacterial dnaA protein helix-turn-helix DUF3039 PF11238.8 NODE_69692_length_227_cov_1.692708_g61751_i0reverse_frame_3 - 2.8 7.8 5.4 0.98 9.2 1.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) CsiV PF10972.8 NODE_69692_length_227_cov_1.692708_g61751_i0reverse_frame_2 - 0.025 14.3 0.0 0.025 14.3 0.0 1.0 1 0 0 1 1 1 0 Peptidoglycan-binding protein, CsiV FAD_SOX PF18371.1 NODE_69690_length_227_cov_1.708333_g61749_i0forward_frame_2 - 0.12 12.8 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase DUF2242 PF10001.9 NODE_69686_length_227_cov_1.755208_g61745_i0forward_frame_3 - 0.29 11.3 3.1 0.37 11.0 3.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2242) zf_PR_Knuckle PF18445.1 NODE_69684_length_227_cov_1.755208_g61743_i0reverse_frame_3 - 0.069 13.0 0.2 0.11 12.4 0.2 1.2 1 0 0 1 1 1 0 PR zinc knuckle motif DUF815 PF05673.13 NODE_69682_length_227_cov_1.776042_g61741_i0reverse_frame_3 - 0.023 13.9 0.1 0.025 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) EbsA PF17255.2 NODE_69681_length_227_cov_1.776042_g61740_i0reverse_frame_3 - 0.11 12.9 1.2 0.13 12.6 1.2 1.1 1 0 0 1 1 1 0 EbsA-like protein MinC_C PF03775.16 NODE_69677_length_227_cov_1.807292_g61736_i0forward_frame_3 - 2.9e-06 27.2 0.0 3.9e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Septum formation inhibitor MinC, C-terminal domain Exo_endo_phos PF03372.23 NODE_69676_length_227_cov_1.812500_g61735_i0forward_frame_2 - 8.7e-06 25.4 0.0 9.1e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_69676_length_227_cov_1.812500_g61735_i0forward_frame_2 - 0.051 13.4 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Pkinase PF00069.25 NODE_69672_length_227_cov_1.822917_g61731_i0reverse_frame_2 - 1.7e-06 27.6 0.0 1.7e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69672_length_227_cov_1.822917_g61731_i0reverse_frame_2 - 0.008 15.5 0.0 0.0087 15.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase BPD_transp_1 PF00528.22 NODE_69670_length_227_cov_1.833333_g61729_i0reverse_frame_2 - 1.3e-13 51.1 0.3 1.3e-13 51.1 0.3 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DUF4485 PF14846.6 NODE_69669_length_227_cov_1.843750_g61728_i0reverse_frame_3 - 0.075 13.1 0.3 0.075 13.1 0.3 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4485) Hist_deacetyl PF00850.19 NODE_69668_length_227_cov_1.854167_g61727_i0reverse_frame_3 - 2.1e-06 27.4 0.0 2.1e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Ank_5 PF13857.6 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 1.5e-07 31.5 0.0 2.7e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 1.3e-06 28.2 0.0 3.7e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 1.6e-05 25.1 0.0 3.4e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeat Ank_4 PF13637.6 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 0.00035 21.1 0.1 0.23 12.1 0.0 2.6 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 0.00082 19.9 0.0 0.003 18.1 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) MAP PF03642.13 NODE_69660_length_227_cov_1.979167_g61719_i0reverse_frame_2 - 0.041 14.2 0.1 0.05 13.9 0.1 1.1 1 0 0 1 1 1 0 MAP domain Cas9_Topo PF17894.1 NODE_69660_length_227_cov_1.979167_g61719_i0forward_frame_2 - 0.11 12.6 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Topo homolgy domain in CRISPR-associated endonuclease Cas9 TerY_C PF15616.6 NODE_69655_length_227_cov_2.057292_g61714_i0reverse_frame_3 - 0.045 13.8 0.4 0.049 13.7 0.4 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain Imm_superinfect PF14373.6 NODE_69654_length_227_cov_2.062500_g61713_i0reverse_frame_2 - 3 7.8 9.4 0.73 9.8 6.0 1.7 1 1 0 1 1 1 0 Superinfection immunity protein Wzy_C PF04932.15 NODE_69649_length_227_cov_2.083333_g61708_i0forward_frame_3 - 3.6 7.2 6.8 3.8 7.1 6.8 1.0 1 0 0 1 1 1 0 O-Antigen ligase Sterol-sensing PF12349.8 NODE_69649_length_227_cov_2.083333_g61708_i0forward_frame_2 - 0.028 14.3 0.4 0.034 14.0 0.4 1.1 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation Ras PF00071.22 NODE_69644_length_227_cov_2.171875_g61703_i0forward_frame_3 - 0.0001 21.9 0.1 0.00012 21.8 0.1 1.1 1 0 0 1 1 1 1 Ras family Pkinase PF00069.25 NODE_69643_length_227_cov_2.177083_g61702_i0reverse_frame_3 - 5.4e-16 58.7 0.7 5.7e-16 58.7 0.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69643_length_227_cov_2.177083_g61702_i0reverse_frame_3 - 1.9e-07 30.7 0.2 1.9e-07 30.6 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Cupredoxin_1 PF13473.6 NODE_69641_length_227_cov_2.187500_g61700_i0reverse_frame_3 - 0.0094 16.1 0.0 0.011 15.9 0.0 1.2 1 0 0 1 1 1 1 Cupredoxin-like domain hGDE_N PF14699.6 NODE_69641_length_227_cov_2.187500_g61700_i0reverse_frame_3 - 0.031 14.4 0.1 0.035 14.2 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain from the human glycogen debranching enzyme DUF5344 PF17279.2 NODE_69638_length_227_cov_2.239583_g61697_i0forward_frame_3 - 0.02 15.4 1.3 0.032 14.8 0.6 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5344) TssC PF17541.2 NODE_69638_length_227_cov_2.239583_g61697_i0forward_frame_3 - 0.036 12.9 0.5 0.039 12.8 0.5 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssC, VipB LZ3wCH PF18517.1 NODE_69638_length_227_cov_2.239583_g61697_i0forward_frame_3 - 0.06 13.4 0.2 0.079 13.1 0.2 1.3 1 0 0 1 1 1 0 Leucine zipper with capping helix domain Vac_Fusion PF02346.16 NODE_69638_length_227_cov_2.239583_g61697_i0forward_frame_3 - 0.16 11.6 0.3 1.9 8.1 0.1 2.0 1 1 1 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 KGG PF10685.9 NODE_69625_length_227_cov_2.541667_g61684_i0reverse_frame_3 - 0.16 12.3 0.1 0.3 11.4 0.1 1.5 1 0 0 1 1 1 0 Stress-induced bacterial acidophilic repeat motif NPR3 PF03666.13 NODE_69616_length_227_cov_2.744792_g61675_i0forward_frame_3 - 0.82 8.4 12.9 0.84 8.4 12.9 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Mucin PF01456.17 NODE_69616_length_227_cov_2.744792_g61675_i0forward_frame_3 - 2.4 8.1 47.1 2.8 7.9 47.1 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein MGC-24 PF05283.11 NODE_69616_length_227_cov_2.744792_g61675_i0forward_frame_3 - 8.5 6.8 28.0 10 6.6 28.0 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF4510 PF14971.6 NODE_69608_length_227_cov_2.984375_g61667_i0forward_frame_2 - 0.051 13.9 0.1 0.052 13.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4510) RLAN PF14401.6 NODE_69607_length_227_cov_3.000000_g61666_i0reverse_frame_2 - 0.02 14.5 0.4 0.022 14.4 0.4 1.1 1 0 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain PHM7_cyt PF14703.6 NODE_69607_length_227_cov_3.000000_g61666_i0reverse_frame_2 - 0.034 14.4 0.7 0.036 14.3 0.7 1.0 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter RNB PF00773.19 NODE_69606_length_227_cov_3.041667_g61665_i0forward_frame_3 - 8.3e-09 35.2 0.0 8.5e-09 35.2 0.0 1.0 1 0 0 1 1 1 1 RNB domain UPF0176_N PF17773.1 NODE_69603_length_227_cov_3.328125_g61662_i0reverse_frame_2 - 5.3e-14 52.3 0.0 5.8e-14 52.2 0.0 1.0 1 0 0 1 1 1 1 UPF0176 acylphosphatase like domain PTS_EIIC PF02378.18 NODE_69602_length_227_cov_3.348958_g61661_i0reverse_frame_3 - 6.5e-06 25.4 0.2 6.9e-06 25.3 0.2 1.0 1 0 0 1 1 1 1 Phosphotransferase system, EIIC tRNA_NucTransf2 PF09249.11 NODE_69602_length_227_cov_3.348958_g61661_i0reverse_frame_2 - 0.023 14.9 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 tRNA nucleotidyltransferase, second domain YqfD PF06898.11 NODE_69596_length_227_cov_4.463542_g61655_i0reverse_frame_2 - 0.43 9.4 1.1 0.47 9.2 1.1 1.1 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD GPR15L PF15854.5 NODE_69596_length_227_cov_4.463542_g61655_i0reverse_frame_2 - 0.8 10.0 7.2 0.17 12.1 3.5 1.7 2 0 0 2 2 2 0 G-protein coupled receptor ligand 15 AflR PF08493.10 NODE_69596_length_227_cov_4.463542_g61655_i0forward_frame_2 - 0.019 14.5 0.1 0.022 14.2 0.1 1.1 1 0 0 1 1 1 0 Aflatoxin regulatory protein Chorismate_synt PF01264.21 NODE_69596_length_227_cov_4.463542_g61655_i0forward_frame_2 - 0.16 10.7 0.0 0.16 10.6 0.0 1.0 1 0 0 1 1 1 0 Chorismate synthase DUF4171 PF13775.6 NODE_69595_length_227_cov_4.593750_g61654_i0forward_frame_3 - 0.041 14.3 3.9 0.043 14.3 3.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4171) SYS1 PF09801.9 NODE_69594_length_227_cov_4.869792_g61653_i0reverse_frame_3 - 0.032 14.4 0.0 0.04 14.1 0.0 1.1 1 0 0 1 1 1 0 Integral membrane protein S linking to the trans Golgi network # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks324.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks324.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks324.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks324.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YojJ PF10372.9 NODE_69593_length_227_cov_4.895833_g61652_i0reverse_frame_3 - 0.061 13.4 0.9 0.16 12.0 0.0 1.9 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Chordopox_A30L PF06015.12 NODE_69591_length_227_cov_12.359375_g61650_i0forward_frame_3 - 0.11 12.4 1.2 0.15 11.9 1.2 1.4 1 0 0 1 1 1 0 Chordopoxvirus A30L protein T3SS_ExsE PF18286.1 NODE_69590_length_227_cov_12.739583_g61649_i0reverse_frame_2 - 0.06 13.3 0.1 0.087 12.8 0.1 1.3 1 0 0 1 1 1 0 Type III secretion system ExsE DUF4972 PF16342.5 NODE_69587_length_227_cov_24.312500_g61646_i0reverse_frame_2 - 0.02 14.6 1.1 0.026 14.2 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) RHH_6 PF16762.5 NODE_69587_length_227_cov_24.312500_g61646_i0reverse_frame_2 - 0.11 13.1 1.5 0.13 12.8 0.8 1.5 2 0 0 2 2 2 0 Ribbon-helix-helix domain DUF2393 PF09624.10 NODE_69587_length_227_cov_24.312500_g61646_i0forward_frame_3 - 0.8 9.7 4.4 0.86 9.6 4.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) DUF1509 PF07420.11 NODE_69586_length_227_cov_26.000000_g61645_i0reverse_frame_3 - 4.5 6.1 7.7 4.8 6.0 7.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) SlyX PF04102.12 NODE_69586_length_227_cov_26.000000_g61645_i0reverse_frame_2 - 0.0068 17.0 1.0 0.0084 16.7 1.0 1.2 1 0 0 1 1 1 1 SlyX XhlA PF10779.9 NODE_69586_length_227_cov_26.000000_g61645_i0reverse_frame_2 - 0.037 14.2 0.3 0.062 13.5 0.3 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Swi5 PF07061.11 NODE_69586_length_227_cov_26.000000_g61645_i0reverse_frame_2 - 0.3 11.2 5.6 0.52 10.4 5.6 1.5 1 1 0 1 1 1 0 Swi5 AbiH PF14253.6 NODE_69584_length_227_cov_30.348958_g61643_i0forward_frame_3 - 0.014 15.3 0.0 0.014 15.2 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage abortive infection AbiH Maf1 PF09174.10 NODE_69582_length_227_cov_30.828125_g61641_i0reverse_frame_3 - 0.027 14.7 0.2 0.027 14.6 0.2 1.2 1 0 0 1 1 1 0 Maf1 regulator Tn7_Tnp_TnsA_C PF08721.11 NODE_69581_length_227_cov_31.583333_g61640_i0forward_frame_2 - 0.034 14.8 0.2 0.048 14.3 0.2 1.3 1 1 0 1 1 1 0 TnsA endonuclease C terminal Totivirus_coat PF05518.11 NODE_69579_length_227_cov_34.791667_g61638_i0reverse_frame_3 - 4.8 5.1 6.3 5.3 5.0 6.3 1.0 1 0 0 1 1 1 0 Totivirus coat protein DNA_pol_phi PF04931.13 NODE_69578_length_227_cov_35.859375_g61637_i0reverse_frame_3 - 2.2 6.3 13.4 2.3 6.2 13.4 1.0 1 0 0 1 1 1 0 DNA polymerase phi Drc1-Sld2 PF11719.8 NODE_69578_length_227_cov_35.859375_g61637_i0reverse_frame_3 - 2.4 7.6 12.2 2.5 7.5 12.2 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein DUF5023 PF16426.5 NODE_69577_length_227_cov_36.390625_g61636_i0reverse_frame_3 - 0.07 12.8 0.0 0.075 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5023) DUF4979 PF16351.5 NODE_69576_length_227_cov_37.411458_g61635_i0reverse_frame_2 - 0.027 14.7 0.0 0.029 14.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4979) DUF3450 PF11932.8 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.00021 20.7 1.1 0.00026 20.4 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) RNA_pol_A_CTD PF03118.15 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.00044 20.0 0.7 0.00061 19.5 0.7 1.2 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain DUF2570 PF10828.8 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.001 18.9 2.7 0.0011 18.8 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2570) DUF641 PF04859.12 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.0013 19.0 1.1 0.0016 18.8 1.1 1.1 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) ATG16 PF08614.11 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.0054 17.0 0.8 0.0063 16.8 0.8 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) Spc7 PF08317.11 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.0067 15.4 5.6 0.0069 15.3 5.6 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.022 15.3 3.3 0.026 15.0 3.3 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF1664 PF07889.12 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.044 13.8 1.2 0.068 13.2 0.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF16 PF01519.16 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.075 13.5 5.6 0.097 13.2 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 TcdB_N PF12918.7 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.11 12.8 6.1 0.07 13.4 4.8 1.5 1 1 0 1 1 1 0 TcdB toxin N-terminal helical domain DivIC PF04977.15 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.12 12.1 3.0 0.23 11.2 2.8 1.6 1 1 0 1 1 1 0 Septum formation initiator TMPIT PF07851.13 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.75 9.0 4.5 0.82 8.9 4.5 1.0 1 0 0 1 1 1 0 TMPIT-like protein Tnp_22_trimer PF17489.2 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 9.4 6.3 8.4 0.51 10.3 0.6 2.1 2 0 0 2 2 2 0 L1 transposable element trimerization domain NinF PF05810.12 NODE_69570_length_227_cov_39.572917_g61629_i0forward_frame_3 - 0.06 13.2 0.0 0.084 12.8 0.0 1.2 1 0 0 1 1 1 0 NinF protein TM231 PF10149.9 NODE_69569_length_227_cov_40.645833_g61628_i0reverse_frame_3 - 0.22 10.8 1.6 0.31 10.3 1.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 231 4HPAD_g_N PF18671.1 NODE_69567_length_227_cov_45.442708_g61626_i0reverse_frame_2 - 0.035 13.8 0.2 0.057 13.1 0.2 1.3 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal Pox_P21 PF05313.12 NODE_69567_length_227_cov_45.442708_g61626_i0forward_frame_3 - 0.0038 16.8 0.6 0.0043 16.6 0.6 1.0 1 0 0 1 1 1 1 Poxvirus P21 membrane protein RNA_pol_Rpb1_5 PF04998.17 NODE_69566_length_227_cov_47.390625_g61625_i0reverse_frame_2 - 0.063 12.7 0.0 0.075 12.5 0.0 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 HOOK PF05622.12 NODE_69566_length_227_cov_47.390625_g61625_i0forward_frame_3 - 0.13 10.3 0.1 0.14 10.2 0.1 1.0 1 0 0 1 1 1 0 HOOK protein zf-LITAF-like PF10601.9 NODE_69566_length_227_cov_47.390625_g61625_i0forward_frame_2 - 0.0045 17.2 0.7 0.0054 17.0 0.7 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain OSK PF17182.4 NODE_69564_length_227_cov_48.239583_g61623_i0reverse_frame_3 - 0.018 14.3 0.2 0.019 14.2 0.2 1.0 1 0 0 1 1 1 0 OSK domain EVI2A PF05399.11 NODE_69564_length_227_cov_48.239583_g61623_i0forward_frame_2 - 0.19 11.3 0.5 0.22 11.1 0.5 1.1 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) eIF_4EBP PF05456.11 NODE_69561_length_227_cov_49.812500_g61620_i0reverse_frame_2 - 0.016 15.2 0.3 0.018 15.0 0.3 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) DUF1651 PF07864.11 NODE_69554_length_227_cov_54.265625_g61613_i0forward_frame_3 - 0.17 12.3 0.1 0.38 11.1 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1651) Vault_4 PF17796.1 NODE_69551_length_227_cov_56.005208_g61610_i0reverse_frame_3 - 0.0011 19.0 0.0 0.0014 18.6 0.0 1.1 1 0 0 1 1 1 1 Major Vault Protein repeat domain MTP18 PF10558.9 NODE_69547_length_227_cov_59.760417_g61606_i0reverse_frame_2 - 0.1 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial 18 KDa protein (MTP18) KN_motif PF12075.8 NODE_69545_length_227_cov_63.984375_g61604_i0forward_frame_3 - 0.066 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 KN motif EBP PF05241.12 NODE_69544_length_227_cov_65.125000_g61603_i0reverse_frame_3 - 0.081 12.4 4.9 0.083 12.3 4.9 1.3 1 1 0 1 1 1 0 Emopamil binding protein zf-SAP30 PF13866.6 NODE_69541_length_227_cov_65.640625_g61600_i0reverse_frame_2 - 0.096 12.8 4.7 2.5 8.3 0.1 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger Tcp10_C PF07202.13 NODE_69540_length_227_cov_69.020833_g61599_i0forward_frame_2 - 2.6e-09 37.3 2.3 2.6e-09 37.3 2.3 1.1 1 0 0 1 1 1 1 T-complex protein 10 C-terminus DUF5421 PF17458.2 NODE_69534_length_227_cov_77.161458_g61593_i0reverse_frame_2 - 0.11 11.9 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5421) DUF4501 PF14946.6 NODE_69534_length_227_cov_77.161458_g61593_i0forward_frame_3 - 0.71 9.9 2.6 0.84 9.7 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Sensor_TM1 PF13755.6 NODE_69534_length_227_cov_77.161458_g61593_i0forward_frame_3 - 0.75 9.6 4.6 1.2 8.9 4.6 1.4 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain Lamprin PF06403.11 NODE_69532_length_227_cov_83.468750_g61591_i0forward_frame_3 - 1.1 9.3 8.2 5.8 6.9 6.8 1.9 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_69532_length_227_cov_83.468750_g61591_i0forward_frame_2 - 0.012 15.5 13.0 0.029 14.3 13.0 1.6 1 1 0 1 1 1 0 Lamprin NatB_MDM20 PF09797.9 NODE_69531_length_227_cov_85.104167_g61590_i0forward_frame_3 - 0.014 14.4 0.7 0.016 14.2 0.7 1.0 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit DUF4061 PF13270.6 NODE_69531_length_227_cov_85.104167_g61590_i0forward_frame_3 - 0.052 13.9 0.2 0.064 13.6 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4061) Rad4 PF03835.15 NODE_69524_length_227_cov_117.703125_g61583_i0reverse_frame_2 - 0.0041 16.8 0.0 0.0053 16.4 0.0 1.2 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain Phe_ZIP PF08916.11 NODE_69524_length_227_cov_117.703125_g61583_i0reverse_frame_2 - 0.073 13.8 0.3 0.27 12.0 0.1 1.8 2 0 0 2 2 2 0 Phenylalanine zipper DnaJ PF00226.31 NODE_69521_length_227_cov_126.875000_g61580_i0forward_frame_3 - 0.17 12.0 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 DnaJ domain DUF1298 PF06974.13 NODE_69520_length_227_cov_127.328125_g61579_i0forward_frame_3 - 1e-05 25.5 0.0 1.3e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) YwhD PF08741.10 NODE_69520_length_227_cov_127.328125_g61579_i0forward_frame_3 - 0.063 13.0 0.1 0.071 12.8 0.1 1.1 1 0 0 1 1 1 0 YwhD family UPF0147 PF03685.13 NODE_69518_length_227_cov_146.609375_g61577_i0reverse_frame_2 - 0.073 13.1 0.0 0.098 12.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) CobW_C PF07683.14 NODE_69516_length_227_cov_179.692708_g61575_i0reverse_frame_3 - 0.00092 19.1 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain PRP9_N PF16958.5 NODE_69513_length_227_cov_209.786458_g61572_i0reverse_frame_3 - 0.002 18.2 4.4 0.0021 18.1 4.4 1.1 1 0 0 1 1 1 1 Pre-mRNA-splicing factor PRP9 N-terminus DUF2325 PF10087.9 NODE_69513_length_227_cov_209.786458_g61572_i0reverse_frame_3 - 0.023 14.8 2.3 0.023 14.8 2.3 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) p31comet PF06581.12 NODE_69510_length_227_cov_247.729167_g61569_i0forward_frame_2 - 0.12 11.6 1.2 0.12 11.5 1.2 1.0 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding HU-CCDC81_bac_1 PF18174.1 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_3 - 0.043 13.7 0.4 59 3.6 0.0 3.0 3 0 0 3 3 3 0 CCDC81-like prokaryotic HU domain 1 OGFr_III PF04680.13 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_3 - 2.6 8.8 6.2 1.2e+02 3.5 0.1 3.6 4 0 0 4 4 4 0 Opioid growth factor receptor repeat KH_4 PF13083.6 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_3 - 0.011 15.6 2.3 4.7 7.2 0.1 3.0 3 0 0 3 3 3 0 KH domain A1_Propeptide PF07966.12 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_3 - 0.088 12.7 0.0 1.2e+02 2.6 0.0 3.7 4 0 0 4 4 4 0 A1 Propeptide GvpH PF05455.11 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_3 - 0.11 12.5 0.7 32 4.5 0.0 2.8 1 1 2 3 3 3 0 GvpH lci PF12197.8 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_2 - 0.47 10.3 8.9 5.5 6.9 0.1 3.8 4 0 0 4 4 4 0 Bacillus cereus group antimicrobial protein DOG1 PF14144.6 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_2 - 0.94 9.8 3.6 80 3.6 0.1 3.0 3 0 0 3 3 3 0 Seed dormancy control IATP PF04568.12 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_2 - 1.6 9.2 2.5 8.8 6.8 2.5 2.2 1 1 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP DUF1902 PF08972.11 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_2 - 1.8 8.6 3.3 57 3.8 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1902) Chordopox_L2 PF05803.12 NODE_69501_length_228_cov_0.823834_g61560_i0reverse_frame_3 - 0.062 13.1 0.6 0.07 13.0 0.6 1.1 1 0 0 1 1 1 0 Chordopoxvirus L2 protein Mucin PF01456.17 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_3 - 0.41 10.6 19.5 0.39 10.7 19.5 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein FSA_C PF10479.9 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_3 - 4 5.4 10.0 4 5.4 10.0 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus PRP1_N PF06424.12 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_2 - 0.037 14.4 0.2 0.037 14.4 0.2 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal UPF0449 PF15136.6 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_2 - 0.084 13.4 0.7 0.098 13.1 0.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 IMUP PF15761.5 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_2 - 0.22 12.2 6.0 0.28 11.9 6.0 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein MRI PF15325.6 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_2 - 3.8 8.6 6.7 18 6.5 0.0 2.0 1 1 1 2 2 2 0 Modulator of retrovirus infection Ac81 PF05820.11 NODE_69499_length_228_cov_0.829016_g61558_i0forward_frame_2 - 0.099 12.2 5.9 0.075 12.6 3.8 1.7 1 1 1 2 2 2 0 Baculoviridae AC81 MliC PF09864.9 NODE_69495_length_228_cov_0.891192_g61554_i0forward_frame_3 - 0.13 12.2 0.4 0.24 11.4 0.3 1.7 1 1 0 1 1 1 0 Membrane-bound lysozyme-inhibitor of c-type lysozyme OAD_gamma PF04277.13 NODE_69484_length_228_cov_1.036269_g61543_i0forward_frame_2 - 0.72 10.5 2.3 1 10.0 2.3 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain EamA PF00892.20 NODE_69482_length_228_cov_1.036269_g61541_i0reverse_frame_3 - 8.3e-06 26.0 2.7 1e-05 25.7 2.7 1.0 1 0 0 1 1 1 1 EamA-like transporter family ECM1 PF05782.11 NODE_69482_length_228_cov_1.036269_g61541_i0reverse_frame_2 - 0.0029 16.6 0.6 0.0032 16.5 0.6 1.0 1 0 0 1 1 1 1 Extracellular matrix protein 1 (ECM1) GNAT_acetyltr_2 PF13718.6 NODE_69479_length_228_cov_1.082902_g61538_i0forward_frame_2 - 0.36 10.2 0.7 0.39 10.1 0.7 1.0 1 0 0 1 1 1 0 GNAT acetyltransferase 2 3A PF00803.18 NODE_69475_length_228_cov_1.176166_g61534_i0forward_frame_3 - 0.042 13.1 0.0 0.042 13.1 0.0 1.1 1 0 0 1 1 1 0 3A/RNA2 movement protein family HEV_ORF1 PF02444.16 NODE_69474_length_228_cov_1.186528_g61533_i0forward_frame_3 - 0.0035 17.9 0.7 0.0042 17.6 0.7 1.1 1 0 0 1 1 1 1 Hepatitis E virus ORF-2 (Putative capsid protein) T3SS_ATPase_C PF18269.1 NODE_69470_length_228_cov_1.202073_g61529_i0reverse_frame_2 - 0.099 12.5 0.1 0.17 11.7 0.0 1.5 1 1 0 1 1 1 0 T3SS EscN ATPase C-terminal domain SNARE PF05739.19 NODE_69467_length_228_cov_1.207254_g61526_i0forward_frame_3 - 0.077 13.0 0.6 0.13 12.3 0.6 1.4 1 0 0 1 1 1 0 SNARE domain Cmyb_C PF09316.10 NODE_69464_length_228_cov_1.227979_g61523_i0reverse_frame_3 - 0.046 13.4 0.2 0.051 13.2 0.2 1.1 1 0 0 1 1 1 0 C-myb, C-terminal DUF5585 PF17823.1 NODE_69463_length_228_cov_1.233161_g61522_i0forward_frame_2 - 0.098 11.6 2.6 0.12 11.3 2.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5585) Spt20 PF12090.8 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_3 - 0.58 9.7 10.6 0.6 9.7 10.6 1.0 1 0 0 1 1 1 0 Spt20 family ODV-E18 PF10717.9 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.0039 17.0 6.4 0.0039 17.0 6.4 1.9 1 1 0 2 2 2 1 Occlusion-derived virus envelope protein ODV-E18 Shisa PF13908.6 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.0044 17.3 0.7 0.0059 16.9 0.7 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator SARAF PF06682.12 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.027 14.1 0.4 0.032 13.9 0.4 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Amnionless PF14828.6 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.03 13.2 1.2 0.03 13.2 1.2 1.0 1 0 0 1 1 1 0 Amnionless Orf78 PF06024.12 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.046 14.0 4.7 0.1 12.9 4.7 1.6 1 1 0 1 1 1 0 Orf78 (ac78) Baculo_11_kDa PF06143.11 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.058 13.0 0.8 0.058 13.0 0.8 1.7 2 0 0 2 2 2 0 Baculovirus 11 kDa family RIFIN PF02009.16 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.081 12.8 2.6 0.1 12.5 2.6 1.2 1 0 0 1 1 1 0 Rifin Peptidase_M56 PF05569.11 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.085 12.0 2.3 0.085 12.0 2.3 1.0 1 0 0 1 1 1 0 BlaR1 peptidase M56 Gemini_mov PF01708.16 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.2 11.4 2.8 0.28 11.0 2.8 1.2 1 0 0 1 1 1 0 Geminivirus putative movement protein DUF2615 PF11027.8 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.37 11.0 3.3 0.72 10.0 3.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) TMEM154 PF15102.6 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.37 10.7 3.2 0.2 11.5 1.6 1.4 1 1 1 2 2 2 0 TMEM154 protein family DUF3357 PF11837.8 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.56 10.7 8.3 0.82 10.2 8.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3357) HpaP PF09483.10 NODE_69456_length_228_cov_1.238342_g61515_i0forward_frame_2 - 0.048 13.9 0.2 0.054 13.8 0.2 1.3 1 1 0 1 1 1 0 Type III secretion protein (HpaP) Pkr1 PF08636.10 NODE_69456_length_228_cov_1.238342_g61515_i0forward_frame_2 - 0.23 11.6 3.5 0.25 11.5 0.3 2.4 1 1 2 3 3 3 0 ER protein Pkr1 DUF4407 PF14362.6 NODE_69451_length_228_cov_1.243523_g61510_i0reverse_frame_3 - 0.18 11.1 0.1 0.19 11.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Uso1_p115_head PF04869.14 NODE_69451_length_228_cov_1.243523_g61510_i0forward_frame_3 - 0.12 11.5 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, head region MORN PF02493.20 NODE_69449_length_228_cov_1.243523_g61508_i0reverse_frame_3 - 8.1e-07 28.6 2.2 7.8e-06 25.5 0.2 3.0 3 0 0 3 3 3 1 MORN repeat UPF0640 PF15114.6 NODE_69446_length_228_cov_1.243523_g61505_i0reverse_frame_3 - 0.063 13.1 0.5 0.088 12.6 0.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0640 DUF5445 PF17520.2 NODE_69438_length_228_cov_1.310881_g61497_i0forward_frame_2 - 0.055 13.3 0.4 0.096 12.5 0.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5445) Imm70 PF15601.6 NODE_69433_length_228_cov_1.352332_g61492_i0forward_frame_2 - 0.24 11.0 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 70 DUF3915 PF13054.6 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_3 - 0.04 13.9 7.2 0.053 13.5 7.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_3 - 0.24 9.7 11.4 0.22 9.8 11.4 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_2 - 0.0012 18.8 2.2 0.0013 18.7 2.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_2 - 0.012 13.9 9.7 0.013 13.8 9.7 1.0 1 0 0 1 1 1 0 Atrophin-1 family Apis_Csd PF11671.8 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_2 - 0.65 10.0 4.6 0.75 9.8 4.6 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein Nore1-SARAH PF16517.5 NODE_69429_length_228_cov_1.373057_g61488_i0reverse_frame_3 - 0.075 12.9 0.9 0.17 11.8 0.4 1.8 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Polysacc_synt_3 PF13440.6 NODE_69429_length_228_cov_1.373057_g61488_i0forward_frame_3 - 0.065 12.4 0.1 0.073 12.3 0.1 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Cas_Csn2 PF09711.10 NODE_69428_length_228_cov_1.378238_g61487_i0reverse_frame_2 - 0.03 14.0 3.3 0.033 13.8 3.3 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csn2) FtsL PF04999.13 NODE_69427_length_228_cov_1.383420_g61486_i0reverse_frame_2 - 0.14 12.2 1.0 0.16 12.0 1.0 1.2 1 0 0 1 1 1 0 Cell division protein FtsL DUF3721 PF12518.8 NODE_69423_length_228_cov_1.414508_g61482_i0reverse_frame_2 - 0.21 11.5 0.5 0.33 10.8 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function p12I PF12233.8 NODE_69418_length_228_cov_1.450777_g61477_i0reverse_frame_2 - 0.018 15.6 0.6 0.021 15.3 0.6 1.1 1 0 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein Integrase_Zn PF02022.19 NODE_69418_length_228_cov_1.450777_g61477_i0forward_frame_2 - 0.068 13.1 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 Integrase Zinc binding domain Fer4_11 PF13247.6 NODE_69418_length_228_cov_1.450777_g61477_i0forward_frame_2 - 0.12 12.5 1.4 0.31 11.2 1.4 1.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain TPR_MLP1_2 PF07926.12 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.015 15.3 1.4 0.019 15.0 1.4 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein CCDC-167 PF15188.6 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.023 15.0 1.1 0.031 14.6 1.1 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Atg14 PF10186.9 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.029 13.5 3.0 0.033 13.3 3.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LPP PF04728.13 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.042 14.2 0.6 0.065 13.6 0.6 1.3 1 0 0 1 1 1 0 Lipoprotein leucine-zipper Vps51 PF08700.11 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.047 13.8 1.8 0.06 13.4 0.9 1.7 2 0 0 2 2 2 0 Vps51/Vps67 Ank_2 PF12796.7 NODE_69413_length_228_cov_1.528497_g61472_i0forward_frame_2 - 0.085 13.5 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) MFS_1 PF07690.16 NODE_69410_length_228_cov_1.554404_g61469_i0reverse_frame_3 - 1.3e-06 27.6 7.7 1.6e-06 27.3 7.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_4 PF06779.14 NODE_69410_length_228_cov_1.554404_g61469_i0reverse_frame_3 - 4.8e-06 26.1 1.6 5e-06 26.0 1.6 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB NDUF_C2 PF06374.11 NODE_69408_length_228_cov_1.580311_g61467_i0forward_frame_3 - 0.072 13.2 0.1 0.083 13.0 0.1 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) G3P_antiterm PF04309.12 NODE_69407_length_228_cov_1.585492_g61466_i0reverse_frame_2 - 0.057 12.8 0.0 0.07 12.5 0.0 1.1 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator Colipase PF01114.18 NODE_69406_length_228_cov_1.601036_g61465_i0forward_frame_2 - 0.069 12.8 6.0 0.2 11.3 0.3 2.4 2 0 0 2 2 2 0 Colipase, N-terminal domain HTH_Tnp_Tc3_2 PF01498.18 NODE_69405_length_228_cov_1.606218_g61464_i0forward_frame_3 - 0.12 12.7 0.1 0.2 11.9 0.1 1.4 2 0 0 2 2 2 0 Transposase RRM_Rrp7 PF17799.1 NODE_69399_length_228_cov_1.637306_g61458_i0forward_frame_2 - 0.013 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Rrp7 RRM-like N-terminal domain TRAF_BIRC3_bd PF16673.5 NODE_69399_length_228_cov_1.637306_g61458_i0forward_frame_2 - 0.033 14.0 0.4 0.1 12.4 0.4 1.8 1 1 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain ARA70 PF12489.8 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_3 - 0.04 14.1 1.0 0.044 14.0 1.0 1.0 1 0 0 1 1 1 0 Nuclear coactivator AAA_11 PF13086.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 1e-18 68.0 0.0 1.1e-18 68.0 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 1.3e-08 35.3 0.0 1.5e-08 35.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 1.4e-06 28.2 0.0 1.5e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 AAA domain UvrD-helicase PF00580.21 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.00028 20.5 0.0 0.00034 20.3 0.0 1.0 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain PhoH PF02562.16 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.0011 18.4 0.0 0.0012 18.4 0.0 1.0 1 0 0 1 1 1 1 PhoH-like protein AAA_22 PF13401.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.0037 17.5 0.0 0.0044 17.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.0088 15.9 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 Helicase AAA PF00004.29 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.018 15.5 0.3 0.023 15.1 0.3 1.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ResIII PF04851.15 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.029 14.4 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Rad17 PF03215.15 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.037 13.9 0.0 0.044 13.7 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain DEAD PF00270.29 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.042 13.6 0.0 0.047 13.5 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase NACHT PF05729.12 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.056 13.4 0.0 0.063 13.2 0.0 1.1 1 0 0 1 1 1 0 NACHT domain Adeno_IVa2 PF02456.15 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.079 11.7 0.0 0.079 11.7 0.0 1.0 1 0 0 1 1 1 0 Adenovirus IVa2 protein RNA_helicase PF00910.22 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.086 13.2 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.088 12.5 0.0 0.09 12.5 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.1 13.0 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain DUF2075 PF09848.9 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.11 11.7 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_29 PF13555.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.15 11.8 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain MORN PF02493.20 NODE_69392_length_228_cov_1.715026_g61451_i0reverse_frame_2 - 1.4e-14 53.0 33.4 1.1e-09 37.6 5.3 4.4 5 0 0 5 5 5 4 MORN repeat SUR7 PF06687.12 NODE_69392_length_228_cov_1.715026_g61451_i0forward_frame_3 - 3 7.4 11.7 3.4 7.3 11.7 1.0 1 0 0 1 1 1 0 SUR7/PalI family Hexapep PF00132.24 NODE_69385_length_228_cov_1.839378_g61444_i0reverse_frame_3 - 0.0013 18.4 0.1 0.041 13.6 0.2 2.1 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Gram_pos_anchor PF00746.21 NODE_69385_length_228_cov_1.839378_g61444_i0reverse_frame_2 - 0.014 15.3 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Cadherin_C_2 PF16492.5 NODE_69385_length_228_cov_1.839378_g61444_i0reverse_frame_2 - 0.096 13.4 0.2 0.12 13.2 0.2 1.2 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal IQ PF00612.27 NODE_69384_length_228_cov_1.839378_g61443_i0forward_frame_2 - 0.016 14.9 0.2 0.045 13.5 0.1 1.9 2 0 0 2 2 2 0 IQ calmodulin-binding motif BET PF17035.5 NODE_69382_length_228_cov_1.854922_g61441_i0reverse_frame_2 - 0.013 15.7 1.4 0.017 15.2 0.7 1.6 1 1 1 2 2 2 0 Bromodomain extra-terminal - transcription regulation CSTF2_hinge PF14327.6 NODE_69382_length_228_cov_1.854922_g61441_i0reverse_frame_2 - 0.098 13.1 0.3 0.15 12.6 0.2 1.3 1 1 0 1 1 1 0 Hinge domain of cleavage stimulation factor subunit 2 TEX12 PF15219.6 NODE_69379_length_228_cov_1.865285_g61438_i0reverse_frame_3 - 0.061 13.6 0.0 0.07 13.5 0.0 1.2 1 0 0 1 1 1 0 Testis-expressed 12 VitD-bind_III PF09164.10 NODE_69376_length_228_cov_1.911917_g61435_i0reverse_frame_3 - 0.067 13.2 0.3 11 6.1 0.1 2.1 2 0 0 2 2 2 0 Vitamin D binding protein, domain III Glyco_trans_4_4 PF13579.6 NODE_69376_length_228_cov_1.911917_g61435_i0forward_frame_3 - 0.074 13.5 0.3 0.084 13.3 0.3 1.0 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain RVT_1 PF00078.27 NODE_69372_length_228_cov_1.943005_g61431_i0forward_frame_3 - 0.058 12.9 0.0 0.065 12.7 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) zf-CCCH PF00642.24 NODE_69368_length_228_cov_2.005181_g61427_i0reverse_frame_3 - 5.3e-09 35.8 1.2 9.1e-09 35.0 1.2 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_69368_length_228_cov_2.005181_g61427_i0reverse_frame_3 - 1.3e-05 25.1 2.2 2.3e-05 24.3 2.2 1.4 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 NODE_69368_length_228_cov_2.005181_g61427_i0reverse_frame_3 - 0.00016 21.4 1.3 0.00022 20.9 1.3 1.2 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_2 PF14608.6 NODE_69368_length_228_cov_2.005181_g61427_i0reverse_frame_3 - 0.012 16.1 2.9 0.021 15.3 2.9 1.5 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger DUF4957 PF16318.5 NODE_69367_length_228_cov_2.015544_g61426_i0forward_frame_2 - 0.011 15.7 0.2 0.012 15.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) RB_A PF01858.17 NODE_69364_length_228_cov_2.051813_g61423_i0reverse_frame_3 - 0.028 14.3 0.5 0.03 14.2 0.5 1.1 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain KAP PF05804.12 NODE_69364_length_228_cov_2.051813_g61423_i0reverse_frame_2 - 1.6e-14 53.0 3.0 1.7e-14 53.0 3.0 1.0 1 0 0 1 1 1 1 Kinesin-associated protein (KAP) ZnuA PF01297.17 NODE_69364_length_228_cov_2.051813_g61423_i0reverse_frame_2 - 0.027 13.9 0.2 0.027 13.9 0.2 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Xpo1 PF08389.12 NODE_69363_length_228_cov_2.051813_g61422_i0reverse_frame_3 - 0.027 14.5 0.4 0.029 14.4 0.4 1.0 1 0 0 1 1 1 0 Exportin 1-like protein DUF5445 PF17520.2 NODE_69363_length_228_cov_2.051813_g61422_i0reverse_frame_2 - 0.059 13.2 0.3 0.079 12.8 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5445) Latarcin PF10279.9 NODE_69363_length_228_cov_2.051813_g61422_i0forward_frame_3 - 0.17 12.3 0.1 0.23 11.9 0.1 1.2 1 0 0 1 1 1 0 Latarcin precursor SLATT_5 PF18160.1 NODE_69363_length_228_cov_2.051813_g61422_i0forward_frame_2 - 0.021 14.2 0.7 0.024 14.0 0.7 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 DUF4499 PF14934.6 NODE_69361_length_228_cov_2.056995_g61420_i0forward_frame_3 - 0.058 13.7 0.2 0.51 10.7 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4499) Mannitol_dh_C PF08125.13 NODE_69360_length_228_cov_2.067358_g61419_i0forward_frame_3 - 2.3e-12 47.0 0.0 2.4e-12 46.9 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain DUF4296 PF14129.6 NODE_69357_length_228_cov_2.082902_g61416_i0reverse_frame_3 - 0.12 13.0 0.2 0.16 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4296) PSI PF01437.25 NODE_69355_length_228_cov_2.108808_g61414_i0forward_frame_3 - 0.04 14.4 5.8 0.04 14.4 5.8 1.7 2 0 0 2 2 2 0 Plexin repeat MSSP PF03940.13 NODE_69355_length_228_cov_2.108808_g61414_i0forward_frame_2 - 4.3 7.0 21.4 6.6e+02 0.0 21.4 2.3 1 1 0 1 1 1 0 Male specific sperm protein Lamprin PF06403.11 NODE_69349_length_228_cov_2.165803_g61408_i0reverse_frame_3 - 2 8.4 8.1 0.81 9.6 2.1 2.0 1 1 1 2 2 2 0 Lamprin Helicase_C PF00271.31 NODE_69344_length_228_cov_2.196891_g61403_i0forward_frame_2 - 3.3e-06 27.4 0.0 6.4e-06 26.5 0.0 1.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain RB_A PF01858.17 NODE_69341_length_228_cov_2.238342_g61400_i0reverse_frame_2 - 0.039 13.8 0.0 0.044 13.6 0.0 1.0 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain E1_4HB PF16191.5 NODE_69340_length_228_cov_2.238342_g61399_i0forward_frame_3 - 0.044 14.0 0.1 0.059 13.6 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle Orf78 PF06024.12 NODE_69338_length_228_cov_2.243523_g61397_i0forward_frame_3 - 0.02 15.2 0.5 0.021 15.1 0.5 1.2 1 0 0 1 1 1 0 Orf78 (ac78) FtsL PF04999.13 NODE_69338_length_228_cov_2.243523_g61397_i0forward_frame_3 - 0.053 13.5 0.1 0.058 13.4 0.1 1.1 1 0 0 1 1 1 0 Cell division protein FtsL CrgA PF06781.12 NODE_69334_length_228_cov_2.279793_g61393_i0reverse_frame_2 - 0.073 13.1 0.0 0.088 12.9 0.0 1.1 1 0 0 1 1 1 0 Cell division protein CrgA MORN_2 PF07661.13 NODE_69334_length_228_cov_2.279793_g61393_i0reverse_frame_2 - 0.086 13.1 0.6 0.15 12.3 0.6 1.4 1 0 0 1 1 1 0 MORN repeat variant ATG27 PF09451.10 NODE_69334_length_228_cov_2.279793_g61393_i0forward_frame_3 - 0.35 10.7 0.7 0.41 10.5 0.7 1.0 1 0 0 1 1 1 0 Autophagy-related protein 27 XET_C PF06955.12 NODE_69333_length_228_cov_2.279793_g61392_i0reverse_frame_3 - 0.016 15.1 0.2 0.027 14.3 0.2 1.4 1 0 0 1 1 1 0 Xyloglucan endo-transglycosylase (XET) C-terminus Crisp PF08562.10 NODE_69333_length_228_cov_2.279793_g61392_i0reverse_frame_3 - 0.061 13.9 7.1 0.21 12.2 7.1 1.9 1 1 0 1 1 1 0 Crisp IL4Ra_N PF09238.10 NODE_69333_length_228_cov_2.279793_g61392_i0reverse_frame_2 - 0.027 14.8 0.2 0.03 14.7 0.2 1.1 1 0 0 1 1 1 0 Interleukin-4 receptor alpha chain, N-terminal DUF1995 PF09353.10 NODE_69326_length_228_cov_2.404145_g61385_i0reverse_frame_2 - 0.087 12.9 0.0 0.087 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1995) GspL_C PF12693.7 NODE_69325_length_228_cov_2.414508_g61384_i0reverse_frame_3 - 1.5e-14 54.2 0.0 1.7e-14 53.9 0.0 1.0 1 0 0 1 1 1 1 GspL periplasmic domain LINES_N PF14694.6 NODE_69324_length_228_cov_2.424870_g61383_i0reverse_frame_3 - 0.0093 15.5 0.8 0.011 15.3 0.8 1.0 1 0 0 1 1 1 1 Lines N-terminus UPF0139 PF03669.13 NODE_69324_length_228_cov_2.424870_g61383_i0forward_frame_3 - 0.14 12.0 1.1 0.2 11.5 1.0 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0139) SPECT1 PF18680.1 NODE_69323_length_228_cov_2.440415_g61382_i0reverse_frame_3 - 0.12 12.1 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 Plasmodium host cell traversal SPECT1 TAFH PF07531.14 NODE_69322_length_228_cov_2.440415_g61381_i0reverse_frame_3 - 0.022 14.8 0.1 0.032 14.3 0.1 1.4 1 0 0 1 1 1 0 NHR1 homology to TAF ADK_lid PF05191.14 NODE_69319_length_228_cov_2.481865_g61378_i0forward_frame_3 - 1.4e-13 50.5 0.1 2e-13 50.0 0.1 1.2 1 0 0 1 1 1 1 Adenylate kinase, active site lid ADK PF00406.22 NODE_69319_length_228_cov_2.481865_g61378_i0forward_frame_3 - 2.4e-13 50.4 0.0 2.4e-13 50.4 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 NODE_69319_length_228_cov_2.481865_g61378_i0forward_frame_3 - 0.00052 20.4 0.0 0.0006 20.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain IGFL PF14653.6 NODE_69312_length_228_cov_2.694301_g61371_i0forward_frame_2 - 0.02 14.9 1.6 0.024 14.6 1.6 1.2 1 0 0 1 1 1 0 Insulin growth factor-like family Pkinase PF00069.25 NODE_69302_length_228_cov_3.108808_g61361_i0reverse_frame_3 - 2.4e-05 23.9 0.0 2.4e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain DUF2744 PF10910.8 NODE_69299_length_228_cov_3.518135_g61358_i0reverse_frame_2 - 0.035 14.1 0.2 0.052 13.5 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2744) Gaa1 PF04114.14 NODE_69294_length_228_cov_3.989637_g61353_i0reverse_frame_2 - 4.8 6.1 7.1 5.4 5.9 7.1 1.1 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component Keratin_2_head PF16208.5 NODE_69292_length_228_cov_4.404145_g61351_i0reverse_frame_2 - 9.2 6.4 30.9 13 5.9 30.9 1.3 1 0 0 1 1 1 0 Keratin type II head Bac_globin PF01152.21 NODE_69292_length_228_cov_4.404145_g61351_i0forward_frame_2 - 0.18 11.9 4.9 0.21 11.7 4.9 1.3 1 1 0 1 1 1 0 Bacterial-like globin Cyd_oper_YbgE PF09600.10 NODE_69288_length_228_cov_6.082902_g61347_i0forward_frame_3 - 0.01 16.2 0.2 0.014 15.7 0.2 1.3 1 0 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) UCH PF00443.29 NODE_69282_length_228_cov_33.098446_g61341_i0reverse_frame_2 - 1.6e-09 37.7 0.1 1.6e-09 37.7 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase YrvL PF14184.6 NODE_69280_length_228_cov_36.808290_g61339_i0reverse_frame_3 - 0.086 12.9 10.0 0.13 12.4 10.0 1.3 1 1 0 1 1 1 0 Regulatory protein YrvL Pkinase PF00069.25 NODE_69280_length_228_cov_36.808290_g61339_i0forward_frame_3 - 0.00017 21.1 1.2 0.00019 20.9 1.2 1.1 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 NODE_69280_length_228_cov_36.808290_g61339_i0forward_frame_3 - 0.00074 19.2 0.3 0.00083 19.0 0.3 1.0 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 REC104 PF17378.2 NODE_69280_length_228_cov_36.808290_g61339_i0forward_frame_2 - 0.0086 15.9 0.4 0.0094 15.8 0.4 1.0 1 0 0 1 1 1 1 Meiotic recombination protein REC104 Spore_GerAC PF05504.11 NODE_69279_length_228_cov_39.093264_g61338_i0reverse_frame_2 - 0.046 13.9 0.1 0.048 13.9 0.1 1.0 1 0 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal Roc PF08477.13 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 1.3e-06 28.7 0.0 1.7e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 6.1e-06 25.9 0.1 8.3e-06 25.5 0.1 1.2 1 0 0 1 1 1 1 Ras family AAA_7 PF12775.7 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.0024 17.4 0.1 0.0028 17.2 0.1 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region SRPRB PF09439.10 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.0061 16.0 0.0 0.0074 15.7 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.011 15.2 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family DUF4180 PF13788.6 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.038 13.9 0.0 0.045 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4180) TniB PF05621.11 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.047 13.1 0.0 0.049 13.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein T2SSE PF00437.20 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.11 11.5 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.16 11.3 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family DUF5534 PF17686.1 NODE_69270_length_228_cov_44.590674_g61329_i0reverse_frame_2 - 0.0004 20.7 0.2 0.00044 20.6 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5534) Asp_Arg_Hydrox PF05118.15 NODE_69268_length_228_cov_47.243523_g61327_i0reverse_frame_3 - 8.6e-14 51.6 0.1 1.1e-13 51.3 0.1 1.2 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase OEP PF02321.18 NODE_69266_length_228_cov_48.430052_g61325_i0reverse_frame_3 - 0.0038 17.1 4.1 0.0046 16.8 4.1 1.0 1 0 0 1 1 1 1 Outer membrane efflux protein Citrate_bind PF16114.5 NODE_69266_length_228_cov_48.430052_g61325_i0reverse_frame_3 - 0.053 13.0 0.1 0.053 13.0 0.1 1.2 1 0 0 1 1 1 0 ATP citrate lyase citrate-binding Toprim_C_rpt PF13368.6 NODE_69266_length_228_cov_48.430052_g61325_i0reverse_frame_3 - 0.29 11.2 2.6 0.52 10.3 2.6 1.7 1 1 0 1 1 1 0 Topoisomerase C-terminal repeat DUF2547 PF10818.8 NODE_69265_length_228_cov_48.911917_g61324_i0forward_frame_2 - 0.14 13.1 0.1 0.17 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) Oxidored_q5_N PF01059.17 NODE_69261_length_228_cov_54.725389_g61320_i0forward_frame_3 - 0.026 14.6 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Ydc2-catalyt PF09159.10 NODE_69260_length_228_cov_55.626943_g61319_i0forward_frame_2 - 0.099 12.4 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 VHS PF00790.19 NODE_69258_length_228_cov_56.932642_g61317_i0reverse_frame_3 - 0.023 14.5 0.4 0.025 14.4 0.4 1.1 1 0 0 1 1 1 0 VHS domain KinB_sensor PF16767.5 NODE_69255_length_228_cov_60.554404_g61314_i0reverse_frame_2 - 0.05 14.1 0.0 0.052 14.0 0.0 1.1 1 0 0 1 1 1 0 Sensor domain of alginate biosynthesis sensor protein KinB DDT PF02791.17 NODE_69254_length_228_cov_61.740933_g61313_i0forward_frame_3 - 0.015 15.6 2.0 0.019 15.2 2.0 1.2 1 0 0 1 1 1 0 DDT domain DUF1280 PF06918.14 NODE_69254_length_228_cov_61.740933_g61313_i0forward_frame_2 - 0.058 13.0 0.5 0.062 12.9 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1280) Sm_like PF16243.5 NODE_69253_length_228_cov_62.305699_g61312_i0reverse_frame_3 - 0.19 11.9 0.4 0.77 9.9 0.2 1.9 1 1 1 2 2 2 0 Sm_like domain Replicase PF03090.17 NODE_69249_length_228_cov_66.626943_g61308_i0forward_frame_3 - 0.061 13.2 0.0 0.064 13.1 0.0 1.1 1 0 0 1 1 1 0 Replicase family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks325.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks325.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks325.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks325.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:09:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3199 PF11436.8 NODE_69245_length_228_cov_69.663212_g61304_i0forward_frame_3 - 0.0041 17.1 0.1 0.0046 17.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3199) MORN PF02493.20 NODE_69238_length_228_cov_110.512953_g61297_i0forward_frame_2 - 0.00056 19.6 1.6 0.0014 18.4 0.4 2.1 2 0 0 2 2 2 1 MORN repeat S1-P1_nuclease PF02265.16 NODE_69232_length_228_cov_138.227979_g61291_i0reverse_frame_2 - 4.5e-09 36.5 0.0 5.1e-09 36.3 0.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease She9_MDM33 PF05546.11 NODE_69220_length_228_cov_337.041451_g61279_i0reverse_frame_3 - 0.025 14.4 0.2 0.03 14.1 0.2 1.0 1 0 0 1 1 1 0 She9 / Mdm33 family Med2 PF11214.8 NODE_69220_length_228_cov_337.041451_g61279_i0reverse_frame_3 - 0.033 14.3 0.2 0.037 14.2 0.2 1.2 1 0 0 1 1 1 0 Mediator complex subunit 2 ARL17 PF15840.5 NODE_69218_length_228_cov_432.544041_g61277_i0reverse_frame_3 - 0.041 14.3 0.1 0.06 13.7 0.1 1.4 1 0 0 1 1 1 0 ADP-ribosylation factor-like protein 17 DUF1476 PF07345.11 NODE_69217_length_228_cov_907.683938_g61276_i0forward_frame_2 - 0.097 13.1 0.4 4 7.9 0.0 2.1 1 1 1 2 2 2 0 ATPase inhibitor subunit zeta DUF4010 PF13194.6 ORF9945 - 0.032 13.9 1.9 0.031 14.0 1.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4010) DUF5539 PF17693.1 ORF99158 - 0.0079 15.9 0.3 0.0099 15.6 0.3 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5539) Antimicrobial14 PF08109.11 ORF99107 - 0.17 12.0 0.1 0.39 10.8 0.0 1.7 2 0 0 2 2 2 0 Lactocin 705 family DUF5450 PF17529.2 ORF97111 - 0.35 11.0 2.1 0.35 11.0 2.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5450) FeoA PF04023.14 ORF97033 - 3.1e-08 33.7 0.0 3.5e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 FeoA domain DUF2616 PF11077.8 ORF96962 - 0.084 12.6 0.1 0.089 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2616) HeLo PF14479.6 ORF96918 - 0.032 14.1 0.0 0.042 13.7 0.0 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation ATP-synt_C PF00137.21 ORF96600 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF96600 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 Carm_PH PF17888.1 ORF9650 - 0.04 14.3 0.5 0.045 14.1 0.5 1.2 1 0 0 1 1 1 0 Carmil pleckstrin homology domain AP3D1 PF06375.11 ORF96455 - 0.027 14.7 19.6 0.029 14.6 19.6 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 GAGA_bind PF06217.12 ORF96455 - 1.3 9.3 9.9 1.2 9.3 9.9 1.0 1 0 0 1 1 1 0 GAGA binding protein-like family OAD_gamma PF04277.13 ORF96455 - 2.8 8.6 5.0 3.2 8.4 5.0 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF3464 PF11947.8 ORF96455 - 3 7.6 12.6 3.7 7.3 12.6 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 RPOL_N PF14700.6 ORF96455 - 4.8 6.5 11.2 5 6.4 11.2 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase N-terminal FAM176 PF14851.6 ORF96455 - 5.4 6.7 10.0 6.4 6.4 10.0 1.2 1 0 0 1 1 1 0 FAM176 family Sec62 PF03839.16 ORF96455 - 5.7 6.4 11.7 6.7 6.1 11.7 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Peptidase_S49_N PF08496.10 ORF96455 - 7.4 6.6 10.4 7.3 6.6 10.4 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Adeno_PV PF03910.13 ORF96455 - 9.1 4.9 8.5 10 4.7 8.5 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV CSRNP_N PF16019.5 ORF96455 - 9.1 6.1 11.3 10 6.0 11.3 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus AXE1 PF05448.12 ORF9588 - 0.068 11.8 0.4 0.075 11.7 0.4 1.0 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) FAM117 PF15388.6 ORF95605 - 0.009 15.5 0.5 0.009 15.5 0.5 1.0 1 0 0 1 1 1 1 Protein Family FAM117 Stevor PF17410.2 ORF95512 - 9.7 5.6 7.7 2.3 7.7 4.7 1.4 1 1 1 2 2 2 0 Subtelomeric Variable Open Reading frame DpnD-PcfM PF14207.6 ORF95372 - 0.13 12.2 0.3 6.9 6.6 0.0 2.2 2 0 0 2 2 2 0 DpnD/PcfM-like protein NitrOD1 PF18549.1 ORF95372 - 0.19 11.7 2.1 2.4 8.2 0.1 2.1 1 1 1 2 2 2 0 Nitrosopumilus output domain 1 THF_DHG_CYH_C PF02882.19 ORF95034 - 0.11 11.8 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF560 PF04575.13 ORF94634 - 0.32 10.4 0.0 0.37 10.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF560) GP120 PF00516.18 ORF94247 - 0.088 11.4 0.3 0.095 11.3 0.3 1.0 1 0 0 1 1 1 0 Envelope glycoprotein GP120 Melibiase_2 PF16499.5 ORF94107 - 0.00025 20.3 0.0 0.00025 20.3 0.0 1.1 1 0 0 1 1 1 1 Alpha galactosidase A DUF3742 PF12553.8 ORF93282 - 0.05 13.7 0.1 0.05 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) GP67 PF17634.2 ORF92966 - 0.15 12.5 3.5 0.095 13.1 1.5 1.6 1 1 1 2 2 2 0 Gene product 67 RE_HpaII PF09561.10 ORF92966 - 1.5 8.1 8.4 1.8 7.9 8.4 1.0 1 0 0 1 1 1 0 HpaII restriction endonuclease YpjP PF14005.6 ORF92966 - 5.7 7.0 7.7 6 6.9 7.7 1.0 1 0 0 1 1 1 0 YpjP-like protein RRM_DME PF15628.6 ORF92536 - 0.12 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 RRM in Demeter Carla_C4 PF01623.17 ORF92444 - 0.21 11.6 5.7 0.3 11.1 5.7 1.4 1 1 0 1 1 1 0 Carlavirus putative nucleic acid binding protein PSI PF01437.25 ORF92288 - 0.0009 19.7 2.1 0.0009 19.7 2.1 1.6 2 0 0 2 2 2 1 Plexin repeat BTHB PF18410.1 ORF92288 - 0.019 14.8 0.0 0.022 14.6 0.0 1.1 1 0 0 1 1 1 0 Basic tilted helix bundle domain SKA2 PF16740.5 ORF92288 - 0.1 12.4 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 DUF2706 PF10913.8 ORF92032 - 0.05 13.5 0.5 0.16 11.8 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2706) OAR PF03826.17 ORF92032 - 0.92 9.4 6.1 12 5.9 0.4 3.0 2 1 1 3 3 3 0 OAR domain Methyltransf_23 PF13489.6 ORF91988 - 3.8e-06 26.8 0.0 3.9e-06 26.8 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF91988 - 6.1e-06 26.9 0.0 7.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF91988 - 0.00038 21.0 0.0 0.00046 20.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF91988 - 0.00083 20.0 0.0 0.001 19.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain DUF560 PF04575.13 ORF91600 - 0.32 10.4 0.0 0.37 10.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF560) DPRP PF04244.13 ORF90725 - 0.0032 17.3 0.2 0.0034 17.3 0.2 1.0 1 0 0 1 1 1 1 Deoxyribodipyrimidine photo-lyase-related protein Holin_BlyA PF05102.12 ORF90644 - 0.0058 16.6 0.2 0.0085 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family Phlebovirus_G1 PF07243.11 ORF90643 - 0.078 11.3 0.3 0.077 11.4 0.3 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Cyclin PF08613.11 ORF90111 - 0.005 17.2 0.2 0.006 17.0 0.2 1.1 1 0 0 1 1 1 1 Cyclin Holin_BlyA PF05102.12 ORF89478 - 0.0058 16.6 0.2 0.0085 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family Asp PF00026.23 ORF89249 - 9.5e-05 22.0 0.0 0.00014 21.4 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease APOC4 PF15119.6 ORF89232 - 0.012 15.9 1.2 0.015 15.5 1.2 1.4 1 1 0 1 1 1 0 Apolipoprotein C4 Bac_globin PF01152.21 ORF88992 - 0.093 12.9 0.6 0.1 12.7 0.6 1.2 1 0 0 1 1 1 0 Bacterial-like globin zf-dskA_traR PF01258.17 ORF88783 - 0.049 13.6 0.5 0.083 12.8 0.5 1.4 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger P19Arf_N PF07392.12 ORF88783 - 0.056 13.9 0.8 0.1 13.1 0.3 1.8 1 1 0 2 2 2 0 Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus MORN PF02493.20 ORF88720 - 4.4e-11 42.0 21.8 0.00042 20.1 0.6 3.4 4 0 0 4 4 4 3 MORN repeat DUF3048_C PF17479.2 ORF88720 - 0.032 14.6 1.6 0.071 13.5 1.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain Siva PF05458.12 ORF88628 - 0.0074 16.0 2.4 0.0078 15.9 2.4 1.0 1 0 0 1 1 1 1 Cd27 binding protein (Siva) Peptidase_S39 PF02122.15 ORF88628 - 0.064 12.8 0.1 0.074 12.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase S39 Pkinase PF00069.25 ORF88478 - 7.2e-14 51.8 0.3 7.7e-14 51.7 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF88478 - 1.8e-05 24.2 0.1 1.9e-05 24.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1188 PF06690.11 ORF8833 - 0.086 12.4 0.1 0.095 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Pkinase PF00069.25 ORF87255 - 7.2e-14 51.8 0.3 7.7e-14 51.7 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF87255 - 1.8e-05 24.2 0.1 1.9e-05 24.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase zf_Rg PF17915.1 ORF86799 - 0.19 11.2 2.4 0.28 10.6 2.0 1.5 1 1 0 1 1 1 0 Reverse gyrase zinc finger OCRE PF17780.1 ORF8659 - 0.061 13.3 2.2 0.086 12.9 2.2 1.2 1 0 0 1 1 1 0 OCRE domain PGM_PMM_II PF02879.16 ORF8659 - 0.09 13.4 0.0 0.14 12.8 0.0 1.4 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DUF4515 PF14988.6 ORF86204 - 0.018 14.9 8.1 0.019 14.8 8.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4515) Tropomyosin_1 PF12718.7 ORF86204 - 0.019 15.1 2.5 0.019 15.1 2.5 1.7 1 1 1 2 2 2 0 Tropomyosin like Med21 PF11221.8 ORF86204 - 0.023 15.0 1.7 0.026 14.8 1.7 1.1 1 0 0 1 1 1 0 Subunit 21 of Mediator complex Mago_nashi PF02792.14 ORF86204 - 0.13 12.4 3.4 0.16 12.1 3.4 1.1 1 0 0 1 1 1 0 Mago nashi protein DUF641 PF04859.12 ORF86204 - 0.19 12.1 4.7 0.4 11.0 4.7 1.5 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) MORN PF02493.20 ORF85804 - 2.5e-18 64.8 22.9 5.6e-08 32.2 1.3 4.1 4 0 0 4 4 4 4 MORN repeat DUF3048_C PF17479.2 ORF85804 - 0.19 12.1 7.2 1 9.8 7.2 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain Tudor_2 PF18104.1 ORF85804 - 0.66 9.7 0.1 0.66 9.7 0.1 3.0 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain Fas_alpha_ACP PF18325.1 ORF85500 - 0.058 13.7 0.1 0.058 13.7 0.1 1.1 1 0 0 1 1 1 0 Fatty acid synthase subunit alpha Acyl carrier domain Takusan PF04822.13 ORF85500 - 0.064 13.1 4.0 0.086 12.7 3.8 1.4 1 1 0 1 1 1 0 Takusan HSBP1 PF06825.12 ORF85453 - 0.065 13.1 2.8 1 9.3 0.7 2.5 1 1 1 2 2 2 0 Heat shock factor binding protein 1 MORN PF02493.20 ORF84988 - 4.1e-15 54.7 20.5 9.2e-07 28.4 0.6 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF84988 - 0.095 12.4 3.3 6.9 6.4 0.0 2.8 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain DUF3048_C PF17479.2 ORF84988 - 0.38 11.2 5.9 0.29 11.5 1.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Birna_VP3 PF01767.16 ORF84557 - 0.016 15.4 2.3 0.016 15.4 2.3 1.0 1 0 0 1 1 1 0 Birnavirus VP3 protein Mpp10 PF04006.12 ORF84557 - 0.63 8.4 6.7 0.58 8.5 6.7 1.0 1 0 0 1 1 1 0 Mpp10 protein Lir1 PF07207.11 ORF84315 - 0.091 13.0 0.0 0.12 12.6 0.0 1.3 1 1 0 1 1 1 0 Light regulated protein Lir1 PsbT PF01405.17 ORF84190 - 0.19 11.5 0.2 0.29 11.0 0.2 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre T protein Antiterm PF03589.13 ORF8414 - 0.18 12.2 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Antitermination protein GPHR_N PF12537.8 ORF84024 - 0.023 14.8 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 The Golgi pH Regulator (GPHR) Family N-terminal CytoC_RC PF02276.18 ORF83682 - 0.057 12.8 0.0 0.058 12.8 0.0 1.0 1 0 0 1 1 1 0 Photosynthetic reaction centre cytochrome C subunit HTH_Tnp_Mu_2 PF09039.11 ORF83682 - 0.12 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Mu DNA binding, I gamma subdomain GST_C PF00043.25 ORF83675 - 1.5e-06 28.3 0.1 3.3e-06 27.2 0.0 1.5 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF83675 - 6.9e-05 23.0 0.0 9.4e-05 22.5 0.0 1.3 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Phage_XkdX PF09693.10 ORF83675 - 0.0061 16.6 0.0 0.016 15.2 0.0 1.6 1 0 0 1 1 1 1 Phage uncharacterised protein (Phage_XkdX) Phage_rep_org_N PF09681.10 ORF83675 - 0.022 14.7 0.7 0.025 14.5 0.7 1.2 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) CCT PF06203.14 ORF83652 - 6.7e-05 22.9 12.4 9.8e-05 22.3 12.4 1.3 1 0 0 1 1 1 1 CCT motif DUF4603 PF15376.6 ORF83652 - 0.49 7.7 3.6 0.51 7.7 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) Antimicrobial14 PF08109.11 ORF83596 - 0.17 12.0 0.1 0.39 10.8 0.0 1.7 2 0 0 2 2 2 0 Lactocin 705 family SNF2_N PF00176.23 ORF83378 - 3e-09 36.1 0.7 3e-09 36.1 0.7 1.1 1 0 0 1 1 1 1 SNF2 family N-terminal domain SNF2_N PF00176.23 ORF82777 - 3e-09 36.1 0.7 3e-09 36.1 0.7 1.1 1 0 0 1 1 1 1 SNF2 family N-terminal domain PC4 PF02229.16 ORF82755 - 4.5e-20 71.0 0.2 5.5e-20 70.7 0.2 1.1 1 0 0 1 1 1 1 Transcriptional Coactivator p15 (PC4) DND1_DSRM PF14709.7 ORF82523 - 0.13 12.6 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 double strand RNA binding domain from DEAD END PROTEIN 1 NMDAR2_C PF10565.9 ORF8230 - 1.1 8.1 4.3 1.3 7.9 4.3 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus MinE PF03776.14 ORF8180 - 0.0099 15.9 3.4 0.38 10.8 0.6 2.1 1 1 1 2 2 2 2 Septum formation topological specificity factor MinE Keratin_B2_2 PF13885.6 ORF81333 - 2.1 8.4 13.9 7.8 6.5 13.9 1.8 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein CDP-OH_P_tran_2 PF08009.11 ORF80919 - 0.09 12.7 0.2 0.12 12.3 0.2 1.2 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase 2 DUF4077 PF13295.6 ORF80251 - 0.011 15.7 2.9 0.013 15.5 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) ATP-synt_C PF00137.21 ORF80174 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF80174 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 HTH_30 PF13556.6 ORF79567 - 0.097 12.5 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Hepsin-SRCR PF09272.10 ORF79370 - 0.046 14.2 0.1 0.048 14.2 0.1 1.1 1 0 0 1 1 1 0 Hepsin, SRCR domain SBDS PF01172.18 ORF79363 - 0.065 13.3 0.0 0.079 13.0 0.0 1.1 1 0 0 1 1 1 0 Shwachman-Bodian-Diamond syndrome (SBDS) protein PAH PF02671.21 ORF79363 - 0.082 13.1 0.4 0.16 12.1 0.4 1.7 1 1 0 1 1 1 0 Paired amphipathic helix repeat CCT PF06203.14 ORF7927 - 6.7e-05 22.9 12.4 9.8e-05 22.3 12.4 1.3 1 0 0 1 1 1 1 CCT motif DUF4603 PF15376.6 ORF7927 - 0.49 7.7 3.6 0.51 7.7 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) Herpes_capsid PF06112.11 ORF79253 - 3.6 7.6 8.4 3.8 7.5 8.4 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Staphostatin_B PF09023.10 ORF79014 - 0.069 13.2 0.2 0.15 12.2 0.1 1.5 1 1 0 1 1 1 0 Staphostatin B DUF560 PF04575.13 ORF78966 - 0.32 10.4 0.0 0.37 10.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF560) ATP-synt_C PF00137.21 ORF78874 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF78874 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 GST_N_2 PF13409.6 ORF78293 - 0.14 12.5 0.2 0.24 11.7 0.2 1.5 1 1 0 1 1 1 0 Glutathione S-transferase, N-terminal domain VGCC_alpha2 PF08473.11 ORF78157 - 0.039 12.7 0.1 0.043 12.6 0.1 1.0 1 0 0 1 1 1 0 Neuronal voltage-dependent calcium channel alpha 2acd SNAPc19 PF15497.6 ORF77951 - 0.019 15.4 4.8 0.024 15.1 4.8 1.1 1 0 0 1 1 1 0 snRNA-activating protein complex subunit 19, SNAPc subunit 19 Enolase_C PF00113.22 ORF77878 - 8.6e-36 123.7 0.4 9.3e-36 123.6 0.4 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Vma12 PF11712.8 ORF77729 - 0.025 14.7 0.9 0.03 14.4 0.9 1.0 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Holin_BlyA PF05102.12 ORF77429 - 0.0058 16.6 0.2 0.0085 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family PDH PF02153.17 ORF77308 - 0.14 11.2 1.3 0.42 9.6 0.1 1.9 1 1 1 2 2 2 0 Prephenate dehydrogenase Pkinase_Tyr PF07714.17 ORF77260 - 0.089 12.1 0.1 0.3 10.3 0.0 1.7 1 1 1 2 2 2 0 Protein tyrosine kinase PT-TG PF14449.6 ORF76937 - 0.068 13.1 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 Pre-toxin TG Pkinase PF00069.25 ORF76660 - 2.6e-11 43.4 0.5 2.7e-11 43.4 0.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF76660 - 2.5e-07 30.2 0.2 2.8e-07 30.1 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Hint_2 PF13403.6 ORF76660 - 0.036 14.4 0.0 0.04 14.2 0.0 1.0 1 0 0 1 1 1 0 Hint domain Pectate_lyase_2 PF06917.12 ORF76477 - 0.14 10.8 0.0 0.16 10.5 0.0 1.0 1 0 0 1 1 1 0 Periplasmic pectate lyase DUF2706 PF10913.8 ORF76346 - 0.05 13.5 0.5 0.16 11.8 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2706) OAR PF03826.17 ORF76346 - 0.92 9.4 6.1 12 5.9 0.4 3.0 2 1 1 3 3 3 0 OAR domain DUF3913 PF13052.6 ORF7557 - 0.015 15.6 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3913) Seipin PF06775.14 ORF7516 - 1.6e-05 25.1 0.1 1.7e-05 25.0 0.1 1.0 1 0 0 1 1 1 1 Putative adipose-regulatory protein (Seipin) DUF4805 PF16063.5 ORF75013 - 0.064 12.6 0.2 0.064 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4805) LuxQ-periplasm PF09308.10 ORF74602 - 0.0022 17.5 0.1 0.0022 17.5 0.1 1.1 1 0 0 1 1 1 1 LuxQ, periplasmic BACON PF13004.7 ORF74366 - 0.018 15.0 0.1 0.022 14.8 0.1 1.2 1 0 0 1 1 1 0 Putative binding domain, N-terminal ATXN-1_C PF12547.8 ORF73180 - 0.11 12.9 1.9 0.24 11.8 1.9 1.5 1 0 0 1 1 1 0 Capicua transcriptional repressor modulator PsbT PF01405.17 ORF72968 - 0.27 11.1 0.9 0.4 10.5 0.9 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre T protein RexA PF15969.5 ORF72927 - 0.046 13.3 0.6 0.05 13.2 0.6 1.1 1 0 0 1 1 1 0 Intracellular sensor of Lambda phage, Abi component SpoU_sub_bind PF08032.12 ORF72927 - 0.066 13.5 0.0 0.079 13.3 0.0 1.1 1 0 0 1 1 1 0 RNA 2'-O ribose methyltransferase substrate binding Hamartin PF04388.12 ORF72848 - 3.9 6.0 5.5 4.4 5.8 5.5 1.0 1 0 0 1 1 1 0 Hamartin protein Toxin_25 PF08095.11 ORF72430 - 0.039 13.9 0.1 0.058 13.4 0.1 1.3 1 0 0 1 1 1 0 Hefutoxin family Antimicrobial14 PF08109.11 ORF722 - 0.17 12.0 0.1 0.39 10.8 0.0 1.7 2 0 0 2 2 2 0 Lactocin 705 family Sec3_C PF09763.9 ORF72183 - 0.084 11.2 0.1 0.089 11.2 0.1 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec3 VEGFR-2_TMD PF17988.1 ORF71838 - 0.06 12.8 1.0 0.06 12.8 1.0 1.7 2 0 0 2 2 2 0 VEGFR-2 Transmembrane domain DUF4013 PF13197.6 ORF71838 - 0.073 12.9 1.9 0.086 12.7 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) DUF4306 PF14154.6 ORF71183 - 0.064 13.4 0.1 0.076 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4306) PUF PF00806.19 ORF70299 - 3.9e-10 38.8 1.4 8.3e-05 22.1 0.0 3.0 3 0 0 3 3 3 3 Pumilio-family RNA binding repeat L31 PF09784.9 ORF70228 - 0.02 15.3 1.1 0.023 15.1 1.1 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 Img2 PF05046.14 ORF70228 - 0.033 14.5 0.1 0.04 14.2 0.1 1.3 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Psm4 PF17063.5 ORF69016 - 1.5 9.6 7.2 2.3 9.0 0.3 3.2 2 1 1 3 3 3 0 Phenol-soluble modulin alpha 4 peptide HBD PF18534.1 ORF68920 - 0.092 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Helical bundle domain PAH PF02671.21 ORF68731 - 0.0049 17.0 0.0 3.5 7.9 0.0 2.2 2 0 0 2 2 2 2 Paired amphipathic helix repeat Sulfotransfer_1 PF00685.27 ORF67955 - 0.039 13.4 0.6 0.042 13.3 0.6 1.0 1 0 0 1 1 1 0 Sulfotransferase domain HeLo PF14479.6 ORF67892 - 0.032 14.1 0.0 0.042 13.7 0.0 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation Asp PF00026.23 ORF67383 - 0.029 13.8 0.6 0.064 12.7 0.3 1.6 2 0 0 2 2 2 0 Eukaryotic aspartyl protease cNMP_binding PF00027.29 ORF67146 - 7.7e-06 25.9 0.0 9.5e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain zf-RAG1 PF10426.9 ORF67028 - 0.11 12.6 0.2 0.23 11.6 0.2 1.5 1 0 0 1 1 1 0 Recombination-activating protein 1 zinc-finger domain DUF515 PF04415.12 ORF66670 - 0.9 7.9 3.6 0.94 7.8 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) UPF0060 PF02694.15 ORF66543 - 0.027 14.7 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family FH2 PF02181.23 ORF66113 - 2e-15 56.8 1.2 2.1e-15 56.7 1.2 1.0 1 0 0 1 1 1 1 Formin Homology 2 Domain DUF3703 PF12487.8 ORF66113 - 0.066 13.0 0.0 0.077 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3703) RWP-RK PF02042.15 ORF65987 - 0.083 12.9 0.4 0.14 12.2 0.4 1.3 1 0 0 1 1 1 0 RWP-RK domain DUF1125 PF06563.11 ORF65964 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1125) PGA2 PF07543.12 ORF65515 - 0.018 15.0 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein trafficking PGA2 Fumerase PF05681.14 ORF65121 - 0.00037 20.0 0.0 0.00039 19.9 0.0 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) MCPVI PF02993.14 ORF64973 - 0.047 13.5 0.9 0.053 13.4 0.9 1.1 1 0 0 1 1 1 0 Minor capsid protein VI Ribosomal_S18 PF01084.20 ORF64784 - 7.5e-25 86.9 0.5 9.8e-25 86.5 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein S18 Rhodanese PF00581.20 ORF64624 - 9.9e-08 32.5 0.0 1.1e-07 32.4 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF1125 PF06563.11 ORF64358 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1125) DUF2116 PF09889.9 ORF64088 - 0.034 14.1 0.0 0.059 13.4 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) UXS1_N PF11803.8 ORF63719 - 0.029 14.7 0.2 0.074 13.4 0.0 1.7 1 1 1 2 2 2 0 UDP-glucuronate decarboxylase N-terminal DUF4713 PF15831.5 ORF63653 - 7.4 7.1 14.2 11 6.6 14.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) RCC1_2 PF13540.6 ORF63524 - 5.7e-05 22.8 2.7 0.088 12.6 0.2 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat SIS_2 PF13580.6 ORF63524 - 0.0033 17.4 1.5 0.041 13.9 0.3 2.0 1 1 1 2 2 2 2 SIS domain K_channel_TID PF07941.11 ORF63524 - 1.5 9.3 4.7 1.8 9.1 3.2 1.8 1 1 1 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain Dpy-30 PF05186.13 ORF63490 - 1.1e-14 53.8 0.6 1.4e-14 53.5 0.6 1.1 1 0 0 1 1 1 1 Dpy-30 motif CDRN PF05174.12 ORF63402 - 0.079 12.7 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Cysteine-rich D. radiodurans N terminus Glycoprot_B_PH2 PF17417.2 ORF6315 - 0.0094 16.3 0.4 0.012 15.9 0.4 1.3 1 1 0 1 1 1 1 Herpesvirus Glycoprotein B PH-like domain MCU PF04678.13 ORF62732 - 0.93 9.6 4.4 0.96 9.5 4.4 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter Response_reg PF00072.24 ORF62421 - 0.00062 19.9 0.1 0.002 18.3 0.1 1.7 1 1 0 1 1 1 1 Response regulator receiver domain Peripla_BP_4 PF13407.6 ORF62421 - 0.041 13.4 0.0 0.043 13.4 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding protein domain Chorion_1 PF01723.16 ORF62377 - 0.18 11.8 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Chorion protein QSregVF PF13652.6 ORF62054 - 0.012 15.7 1.0 0.012 15.6 1.0 1.0 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor JAKMIP_CC3 PF16034.5 ORF62054 - 0.012 15.5 2.2 0.013 15.5 2.2 1.1 1 0 0 1 1 1 0 JAKMIP CC3 domain bZIP_1 PF00170.21 ORF62054 - 0.022 14.8 2.0 0.035 14.2 2.0 1.4 1 0 0 1 1 1 0 bZIP transcription factor Csm1_N PF18504.1 ORF62054 - 0.023 15.0 2.8 0.029 14.7 2.8 1.2 1 0 0 1 1 1 0 Csm1 N-terminal domain bZIP_2 PF07716.15 ORF62054 - 0.73 10.0 5.2 0.88 9.7 3.8 1.9 1 1 1 2 2 2 0 Basic region leucine zipper COA2 PF17051.5 ORF6136 - 0.0054 16.8 0.1 0.0065 16.5 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase assembly factor 2 Alpha-E PF04168.12 ORF61338 - 0.041 13.7 0.1 0.041 13.7 0.1 1.0 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. Carla_C4 PF01623.17 ORF60708 - 0.21 11.6 5.7 0.3 11.1 5.7 1.4 1 1 0 1 1 1 0 Carlavirus putative nucleic acid binding protein Ras PF00071.22 ORF60555 - 9.1e-26 90.4 0.3 9.6e-26 90.3 0.3 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF60555 - 2.2e-16 60.2 0.2 2.3e-16 60.1 0.2 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF60555 - 1.5e-06 27.8 0.2 1.5e-06 27.8 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF60555 - 0.011 15.3 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF60555 - 0.018 14.4 0.1 0.018 14.4 0.1 1.0 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Holin_BlyA PF05102.12 ORF60549 - 0.0058 16.6 0.2 0.0085 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family zf-C2HE PF16278.5 ORF60502 - 2.4 8.7 4.8 14 6.2 4.8 2.0 1 1 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger zf-CCHC_6 PF15288.6 ORF60186 - 0.027 14.3 0.8 0.027 14.3 0.8 1.7 2 1 0 2 2 2 0 Zinc knuckle TOBE_2 PF08402.10 ORF60062 - 6.6e-16 58.3 0.0 7.5e-16 58.1 0.0 1.0 1 0 0 1 1 1 1 TOBE domain TOBE_3 PF12857.7 ORF60062 - 0.046 13.6 0.0 0.072 13.0 0.0 1.4 1 1 0 1 1 1 0 TOBE-like domain zf-RING_2 PF13639.6 ORF59982 - 2.5e-09 37.3 4.4 3.3e-09 36.9 4.4 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF59982 - 5.7e-09 35.6 8.5 9.4e-09 34.9 8.5 1.3 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF59982 - 8.9e-05 22.4 2.8 0.00014 21.9 2.8 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF59982 - 0.00024 20.9 3.3 0.00032 20.5 3.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF59982 - 0.0071 16.2 4.9 0.011 15.6 4.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF59982 - 0.012 15.2 2.9 0.017 14.8 2.9 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 ORF59982 - 0.028 14.7 7.9 0.19 12.0 7.9 1.9 1 1 0 1 1 1 0 RING-H2 zinc finger domain DDE_1 PF03184.19 ORF59982 - 0.056 13.1 0.0 0.062 13.0 0.0 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease RINGv PF12906.7 ORF59982 - 0.062 13.4 5.6 0.093 12.9 5.6 1.3 1 0 0 1 1 1 0 RING-variant domain Methyltrans_SAM PF10672.9 ORF5939 - 0.013 14.7 0.0 0.015 14.5 0.0 1.0 1 0 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase Ank PF00023.30 ORF5939 - 0.088 13.3 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 Ankyrin repeat YdaT_toxin PF06254.11 ORF588 - 0.059 14.0 0.7 0.066 13.8 0.7 1.1 1 0 0 1 1 1 0 Putative bacterial toxin ydaT TTL PF03133.15 ORF5863 - 4.5e-13 49.0 0.2 4.8e-13 48.9 0.2 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family DUF3692 PF12469.8 ORF5863 - 0.05 13.8 0.0 0.053 13.7 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein CdhC PF03598.15 ORF5863 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase complex beta subunit DUF1375 PF07119.12 ORF58406 - 7.1e-08 32.7 7.7 4.4e-06 27.0 7.7 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1375) LPAM_2 PF13627.6 ORF58406 - 0.15 12.0 1.5 0.28 11.1 1.5 1.5 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site UPF0203 PF05254.12 ORF58060 - 0.043 14.1 0.6 0.059 13.6 0.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) Chal_sti_synt_C PF02797.15 ORF5797 - 0.077 13.0 0.0 0.085 12.8 0.0 1.1 1 0 0 1 1 1 0 Chalcone and stilbene synthases, C-terminal domain Filamin PF00630.19 ORF57809 - 0.022 15.6 0.2 0.028 15.2 0.2 1.2 1 0 0 1 1 1 0 Filamin/ABP280 repeat LPD24 PF18839.1 ORF57809 - 0.023 15.0 0.3 0.04 14.2 0.3 1.6 1 1 0 1 1 1 0 Large polyvalent protein associated domain 24 DUF1122 PF06557.11 ORF57809 - 0.15 11.5 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1122) PC4 PF02229.16 ORF5733 - 4.5e-20 71.0 0.2 5.5e-20 70.7 0.2 1.1 1 0 0 1 1 1 1 Transcriptional Coactivator p15 (PC4) HeLo PF14479.6 ORF5618 - 0.032 14.1 0.0 0.042 13.7 0.0 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation LrgA PF03788.14 ORF55910 - 0.065 13.2 0.0 0.065 13.2 0.0 1.1 1 0 0 1 1 1 0 LrgA family HCNGP PF07818.13 ORF55609 - 0.0092 16.6 0.2 0.011 16.3 0.2 1.2 1 0 0 1 1 1 1 HCNGP-like protein SKA2 PF16740.5 ORF55609 - 0.058 13.2 0.3 0.084 12.7 0.2 1.4 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Sugar_tr PF00083.24 ORF55589 - 5.1e-06 25.6 0.2 5.3e-06 25.6 0.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter Phe_ZIP PF08916.11 ORF54847 - 0.017 15.8 2.4 2.2 9.1 0.4 2.1 2 0 0 2 2 2 0 Phenylalanine zipper BPD_transp_1 PF00528.22 ORF54491 - 9.2e-08 32.0 1.5 9.8e-08 31.9 1.5 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_membrane PF00664.23 ORF54279 - 1.1e-08 35.1 1.5 1.1e-08 35.1 1.5 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Ku_PK_bind PF08785.11 ORF54279 - 0.081 13.1 0.1 0.088 13.0 0.1 1.1 1 0 0 1 1 1 0 Ku C terminal domain like Cnd1 PF12717.7 ORF54040 - 0.0076 16.3 2.0 0.0076 16.3 2.0 1.0 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF54040 - 0.025 15.2 0.1 0.03 14.9 0.1 1.1 1 0 0 1 1 1 0 Vacuolar 14 Fab1-binding region DeoRC PF00455.22 ORF53545 - 1.9e-10 40.9 0.5 2.3e-10 40.7 0.5 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain Toxin_25 PF08095.11 ORF53238 - 0.039 13.9 0.1 0.058 13.4 0.1 1.3 1 0 0 1 1 1 0 Hefutoxin family NTR PF01759.21 ORF53158 - 0.069 13.0 3.6 0.077 12.8 3.6 1.0 1 0 0 1 1 1 0 UNC-6/NTR/C345C module DPRP PF04244.13 ORF5273 - 0.0032 17.3 0.2 0.0034 17.3 0.2 1.0 1 0 0 1 1 1 1 Deoxyribodipyrimidine photo-lyase-related protein DUF3275 PF11679.8 ORF52695 - 9 6.2 6.5 9.6 6.1 6.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) MBOAT PF03062.19 ORF52167 - 1.2e-17 64.4 12.3 1.3e-17 64.2 12.3 1.0 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family ATP-synt_C PF00137.21 ORF51714 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF51714 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 DUF4801 PF16059.5 ORF51040 - 0.35 10.9 6.4 0.48 10.4 6.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) Papilin_u7 PF16626.5 ORF50992 - 0.051 14.2 0.3 0.055 14.1 0.3 1.3 1 0 0 1 1 1 0 Linking region between Kunitz_BPTI and I-set on papilin DUF3689 PF12463.8 ORF50963 - 0.0015 17.9 1.7 0.0016 17.8 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3689) PPR_long PF17177.4 ORF50963 - 0.062 12.7 0.2 0.1 11.9 0.2 1.3 1 1 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Orthoreo_P10 PF07204.11 ORF50456 - 0.13 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 cNMP_binding PF00027.29 ORF5015 - 1.6e-07 31.3 0.0 2.1e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain TLD PF07534.16 ORF49824 - 8.9e-05 22.7 0.2 0.00011 22.5 0.2 1.1 1 0 0 1 1 1 1 TLD EF1G PF00647.19 ORF49824 - 0.0061 16.6 0.1 0.0073 16.4 0.1 1.1 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain DUF4743 PF15916.5 ORF49824 - 0.098 12.6 0.0 0.14 12.1 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4743) DUF5370 PF17340.2 ORF49780 - 0.1 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5370) Herpes_gI PF01688.17 ORF49341 - 0.075 12.9 0.4 0.13 12.2 0.4 1.4 1 1 0 1 1 1 0 Alphaherpesvirus glycoprotein I CHASE8 PF17152.4 ORF49078 - 0.088 13.1 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 Periplasmic sensor domain Proteasome_A_N PF10584.9 ORF48951 - 2.1e-14 52.9 0.1 2.9e-14 52.4 0.1 1.2 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Proteasome PF00227.26 ORF48951 - 7.1e-11 41.9 0.0 9e-11 41.6 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Carm_PH PF17888.1 ORF48776 - 0.04 14.3 0.5 0.045 14.1 0.5 1.2 1 0 0 1 1 1 0 Carmil pleckstrin homology domain Myotoxins PF00819.17 ORF48401 - 0.036 14.3 0.4 0.053 13.8 0.4 1.2 1 0 0 1 1 1 0 Myotoxin, crotamine TaqI_C PF12950.7 ORF48352 - 0.074 13.1 0.4 0.087 12.9 0.4 1.1 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain GBP_repeat PF02526.14 ORF48054 - 0.027 14.2 0.2 0.052 13.3 0.2 1.4 1 0 0 1 1 1 0 Glycophorin-binding protein FAM117 PF15388.6 ORF47539 - 0.009 15.5 0.5 0.009 15.5 0.5 1.0 1 0 0 1 1 1 1 Protein Family FAM117 MAM33 PF02330.16 ORF47082 - 3.3e-11 43.6 0.0 3.4e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial glycoprotein DUF883 PF05957.13 ORF46407 - 0.053 14.1 4.6 0.065 13.8 4.6 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) DUF4710 PF15828.5 ORF45501 - 0.22 11.7 9.8 0.24 11.6 8.5 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4710) Lipase_3 PF01764.25 ORF45374 - 6.8e-05 22.8 0.0 7.6e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_5 PF12695.7 ORF45374 - 0.0097 15.7 0.0 0.0097 15.7 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.7 ORF45374 - 0.044 14.4 0.0 0.044 14.4 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF676 PF05057.14 ORF45374 - 0.093 12.2 0.0 0.093 12.2 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Abhydrolase_1 PF00561.20 ORF45374 - 0.12 12.0 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF45374 - 0.17 11.1 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 GAS PF13851.6 ORF44791 - 0.0039 16.6 6.9 0.0055 16.1 6.9 1.3 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding Helo_like_N PF17111.5 ORF44791 - 0.0093 15.4 0.8 0.55 9.6 0.2 2.0 1 1 1 2 2 2 1 Fungal N-terminal domain of STAND proteins DUF4407 PF14362.6 ORF44791 - 0.0099 15.3 0.3 0.011 15.1 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) BRE1 PF08647.11 ORF44791 - 0.01 15.9 6.4 0.013 15.6 6.4 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase Prefoldin PF02996.17 ORF44791 - 0.025 14.5 3.6 1.9 8.4 0.2 2.0 2 0 0 2 2 2 0 Prefoldin subunit Ribosomal_L29 PF00831.23 ORF44791 - 0.036 14.0 3.3 0.16 12.0 3.0 2.1 1 1 0 1 1 1 0 Ribosomal L29 protein PCRF PF03462.18 ORF44791 - 0.046 13.6 1.5 0.15 11.9 1.5 1.7 1 1 0 1 1 1 0 PCRF domain Stealth_CR3 PF17102.5 ORF44791 - 0.053 13.4 0.0 0.079 12.9 0.0 1.3 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 TMF_TATA_bd PF12325.8 ORF44791 - 0.064 13.5 2.2 0.083 13.1 2.2 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Val_tRNA-synt_C PF10458.9 ORF44791 - 0.091 13.1 5.3 19 5.7 5.3 2.4 1 1 0 1 1 1 0 Valyl tRNA synthetase tRNA binding arm Snapin_Pallidin PF14712.6 ORF44791 - 0.12 12.9 3.9 0.16 12.4 3.9 1.2 1 0 0 1 1 1 0 Snapin/Pallidin Com_YlbF PF06133.11 ORF44791 - 0.13 12.9 5.0 0.25 12.0 5.0 1.5 1 1 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA CREPT PF16566.5 ORF44791 - 0.16 12.1 3.3 0.26 11.5 3.3 1.3 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour IFP_35_N PF07334.13 ORF44791 - 0.89 9.7 4.8 4.6 7.4 1.3 2.1 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Prefoldin_2 PF01920.20 ORF44791 - 1.3 9.0 8.3 6.4 6.8 1.2 2.1 1 1 0 2 2 2 0 Prefoldin subunit DUF3155 PF11352.8 ORF44060 - 0.057 13.8 0.0 0.065 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3155) BrnA_antitoxin PF14384.6 ORF44023 - 0.0083 16.6 0.0 0.01 16.3 0.0 1.2 1 0 0 1 1 1 1 BrnA antitoxin of type II toxin-antitoxin system Rad51 PF08423.11 ORF43967 - 0.15 11.3 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Rad51 CRISPR_Cas9_WED PF18061.1 ORF43905 - 0.057 13.5 3.5 0.11 12.5 3.5 1.5 1 1 0 1 1 1 0 CRISPR-Cas9 WED domain SPG48 PF14764.6 ORF43905 - 0.07 13.6 0.1 0.079 13.4 0.1 1.1 1 0 0 1 1 1 0 AP-5 complex subunit, vesicle trafficking Pox_F15 PF04596.12 ORF43834 - 0.022 14.5 0.4 0.026 14.3 0.4 1.2 1 0 0 1 1 1 0 Poxvirus protein F15 MMR_HSR1_C PF08438.10 ORF43009 - 0.054 14.1 0.0 0.058 14.0 0.0 1.1 1 0 0 1 1 1 0 GTPase of unknown function C-terminal DUF4924 PF16271.5 ORF43009 - 0.07 13.1 0.1 0.075 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4924) DUF1188 PF06690.11 ORF42809 - 0.049 13.2 0.2 0.053 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) TRM13 PF05206.14 ORF42809 - 0.096 12.2 0.1 0.11 12.0 0.1 1.0 1 0 0 1 1 1 0 Methyltransferase TRM13 Marek_A PF02124.15 ORF4273 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Marek's disease glycoprotein A Sugar_tr PF00083.24 ORF42585 - 5.1e-06 25.6 0.2 5.3e-06 25.6 0.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter RE_BstXI PF09552.10 ORF41950 - 0.1 11.8 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 BstXI restriction endonuclease EF-hand_6 PF13405.6 ORF41694 - 3.1e-11 42.2 1.0 4.4e-08 32.4 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF41694 - 3.7e-10 38.6 2.4 6.6e-06 25.3 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF41694 - 2.4e-09 37.5 0.3 3.4e-09 37.0 0.3 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF41694 - 1.4e-08 34.4 1.1 4.2e-07 29.7 0.2 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF41694 - 5.4e-06 26.6 0.0 8e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF41694 - 2.3e-05 23.7 2.6 0.011 15.2 0.1 2.5 2 0 0 2 2 2 2 EF hand EF-hand_14 PF17959.1 ORF41694 - 0.025 14.9 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain RWP-RK PF02042.15 ORF41664 - 0.074 13.0 0.4 0.14 12.2 0.4 1.4 1 0 0 1 1 1 0 RWP-RK domain DUF4100 PF13352.6 ORF41623 - 0.75 9.5 5.4 0.92 9.2 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) NP1-WLL PF11733.8 ORF40413 - 1.9 8.2 5.6 2.1 8.0 5.6 1.1 1 0 0 1 1 1 0 Non-capsid protein NP1 Methyltransf_5 PF01795.19 ORF402 - 0.001 18.6 0.1 0.0012 18.4 0.1 1.1 1 0 0 1 1 1 1 MraW methylase family TMEM206 PF15122.6 ORF40157 - 0.48 9.5 4.1 0.56 9.3 4.1 1.0 1 0 0 1 1 1 0 TMEM206 protein family Ank_5 PF13857.6 ORF39904 - 0.00064 20.0 0.1 0.0029 17.9 0.0 1.8 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF39904 - 0.0014 19.2 0.6 0.026 15.1 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF39904 - 0.0067 17.0 0.0 0.0082 16.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) DUF1858 PF08984.11 ORF39904 - 0.062 13.5 0.0 0.1 12.8 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1858) PKcGMP_CC PF16808.5 ORF3949 - 0.00022 21.0 4.1 0.00035 20.4 4.1 1.3 1 0 0 1 1 1 1 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF2117 PF09890.9 ORF3949 - 0.027 14.0 0.1 0.028 13.9 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2117) FPRL1_inhibitor PF16104.5 ORF39024 - 0.024 14.8 1.8 0.029 14.5 1.8 1.1 1 0 0 1 1 1 0 Formyl peptide receptor-like 1 inhibitory protein RD3 PF14473.6 ORF38865 - 0.018 14.9 0.1 0.019 14.8 0.1 1.1 1 0 0 1 1 1 0 RD3 protein Cyc-maltodext_N PF09087.11 ORF38797 - 0.089 13.1 1.4 0.091 13.1 1.4 1.1 1 0 0 1 1 1 0 Cyclomaltodextrinase, N-terminal WBP-1 PF11669.8 ORF38797 - 0.11 13.1 0.1 0.12 13.0 0.1 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 LRR_6 PF13516.6 ORF38654 - 0.0039 17.1 3.2 0.022 14.8 0.1 2.8 3 0 0 3 3 3 1 Leucine Rich repeat LRR_4 PF12799.7 ORF38654 - 0.0068 16.8 3.4 0.2 12.1 1.5 2.4 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) Holin_BlyA PF05102.12 ORF3826 - 0.0058 16.6 0.2 0.0085 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family DUF5087 PF17006.5 ORF38245 - 0.036 13.6 1.5 0.039 13.5 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5087) REC104 PF17378.2 ORF3819 - 0.026 14.3 0.6 0.029 14.2 0.6 1.0 1 0 0 1 1 1 0 Meiotic recombination protein REC104 PI3Ka PF00613.20 ORF37567 - 0.0013 18.2 0.7 0.0016 17.9 0.7 1.1 1 0 0 1 1 1 1 Phosphoinositide 3-kinase family, accessory domain (PIK domain) CH_2 PF06294.11 ORF36916 - 1.4e-20 73.2 0.5 1.5e-20 73.1 0.5 1.0 1 0 0 1 1 1 1 CH-like domain in sperm protein CAMSAP_CH PF11971.8 ORF36916 - 3.7e-13 49.1 0.1 4.2e-13 48.9 0.1 1.1 1 0 0 1 1 1 1 CAMSAP CH domain CH PF00307.31 ORF36916 - 0.013 15.7 0.1 0.013 15.7 0.1 1.1 1 0 0 1 1 1 0 Calponin homology (CH) domain RsbRD_N PF14361.6 ORF36916 - 0.092 13.4 0.0 0.092 13.4 0.0 1.1 1 0 0 1 1 1 0 RsbT co-antagonist protein rsbRD N-terminal domain PknG_rubred PF16919.5 ORF36868 - 0.0045 17.1 0.1 0.005 17.0 0.1 1.1 1 0 0 1 1 1 1 Protein kinase G rubredoxin domain Wzy_C_2 PF11846.8 ORF36738 - 0.15 12.0 0.0 0.16 11.9 0.0 1.0 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal HTH_57 PF18679.1 ORF36312 - 0.11 12.8 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 ThcOx helix turn helix domain Cyt_bd_oxida_II PF02322.15 ORF3611 - 1.9e-10 40.6 0.1 2e-10 40.5 0.1 1.1 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II DUF236 PF03057.14 ORF35932 - 0.14 12.1 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 DUF236 repeat DUF3739 PF12545.8 ORF35572 - 0.073 13.6 0.0 0.089 13.3 0.0 1.0 1 0 0 1 1 1 0 Filamentous haemagglutinin family outer membrane protein CoatB PF10389.9 ORF35169 - 0.061 13.2 2.8 0.078 12.8 2.8 1.2 1 0 0 1 1 1 0 Bacteriophage coat protein B Acetyltransf_1 PF00583.25 ORF34998 - 2.1e-10 40.9 0.2 2.4e-10 40.6 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF34998 - 6.1e-07 29.8 0.2 7.4e-07 29.5 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF34998 - 1e-06 28.7 0.0 1e-06 28.7 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF34998 - 9.9e-05 22.4 0.0 0.00013 22.0 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 ORF34998 - 0.00012 22.0 0.0 0.00015 21.7 0.0 1.1 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF34998 - 0.023 14.8 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 ORF34998 - 0.03 13.9 0.0 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_4 PF13420.7 ORF34998 - 0.04 14.1 0.0 0.042 14.0 0.0 1.0 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF34998 - 0.14 12.8 0.0 0.16 12.6 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PilX_N PF14341.6 ORF34588 - 0.1 12.5 1.6 32 4.6 0.0 3.0 3 0 0 3 3 3 0 PilX N-terminal HU-CCDC81_euk_1 PF14908.6 ORF34407 - 0.08 13.1 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 1 Fip1 PF05182.13 ORF34407 - 1.9 8.0 9.7 0.21 11.1 3.1 2.3 2 0 0 2 2 2 0 Fip1 motif SNF2_N PF00176.23 ORF33777 - 3.4e-09 35.9 0.6 3.4e-09 35.9 0.6 1.1 1 0 0 1 1 1 1 SNF2 family N-terminal domain ATP-synt_ab PF00006.25 ORF32750 - 3.1e-16 59.7 0.1 3.3e-16 59.6 0.1 1.0 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain HATPase_c_5 PF14501.6 ORF32689 - 0.012 15.6 0.1 0.014 15.2 0.1 1.1 1 0 0 1 1 1 0 GHKL domain Staphostatin_B PF09023.10 ORF32513 - 0.069 13.2 0.2 0.15 12.2 0.1 1.5 1 1 0 1 1 1 0 Staphostatin B AAA_11 PF13086.6 ORF3162 - 0.056 13.2 0.0 0.056 13.2 0.0 1.0 1 0 0 1 1 1 0 AAA domain GPR15L PF15854.5 ORF30154 - 0.4 11.0 7.2 0.51 10.6 7.2 1.2 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 Competence PF03772.16 ORF28769 - 0.0097 15.2 0.2 0.01 15.2 0.2 1.0 1 0 0 1 1 1 1 Competence protein PRIMA1 PF16101.5 ORF28641 - 0.11 12.6 5.3 0.13 12.3 5.3 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 EMG1 PF03587.14 ORF27687 - 0.13 11.9 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 EMG1/NEP1 methyltransferase DUF1414 PF07208.11 ORF27674 - 1.3e-24 85.9 0.8 1.8e-24 85.4 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1414) DUF1002 PF06207.11 ORF27674 - 0.058 12.9 0.2 0.063 12.8 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) DEAD_2 PF06733.15 ORF27674 - 0.072 12.7 0.0 0.075 12.7 0.0 1.0 1 0 0 1 1 1 0 DEAD_2 Vta1 PF04652.16 ORF27674 - 0.075 13.0 0.1 0.079 12.9 0.1 1.1 1 0 0 1 1 1 0 Vta1 like O_Spanin_T7 PF17531.2 ORF27674 - 0.29 11.2 1.3 4 7.6 1.0 2.1 2 0 0 2 2 2 0 outer-membrane spanin sub-unit Ninjurin PF04923.12 ORF27412 - 0.013 15.5 0.1 0.015 15.2 0.1 1.1 1 0 0 1 1 1 0 Ninjurin Pkinase PF00069.25 ORF26464 - 2e-09 37.2 0.1 2.1e-09 37.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Methyltransf_5 PF01795.19 ORF26464 - 0.063 12.8 0.0 0.063 12.8 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family Peptidase_M24 PF00557.24 ORF26394 - 2.3e-06 27.5 0.0 2.5e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 Radial_spoke_3 PF06098.11 ORF2610 - 3.9e-06 26.3 0.2 4.3e-06 26.2 0.2 1.0 1 0 0 1 1 1 1 Radial spoke protein 3 Hamartin PF04388.12 ORF26010 - 3.9 6.0 5.5 4.4 5.8 5.5 1.0 1 0 0 1 1 1 0 Hamartin protein MORN PF02493.20 ORF2585 - 2.5e-18 64.8 22.9 5.6e-08 32.2 1.3 4.1 4 0 0 4 4 4 4 MORN repeat DUF3048_C PF17479.2 ORF2585 - 0.19 12.1 7.2 1 9.8 7.2 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain Tudor_2 PF18104.1 ORF2585 - 0.66 9.7 0.1 0.66 9.7 0.1 3.0 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain Phytochelatin PF05023.14 ORF25770 - 3.8e-16 58.9 0.0 4.4e-16 58.7 0.0 1.0 1 0 0 1 1 1 1 Phytochelatin synthase RRM_DME PF15628.6 ORF25015 - 0.12 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 RRM in Demeter Phlebovirus_G1 PF07243.11 ORF24973 - 0.078 11.3 0.3 0.077 11.4 0.3 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Cm_res_leader PF08077.11 ORF24743 - 0.1 12.7 1.4 0.1 12.7 1.4 2.4 3 0 0 3 3 3 0 Chloramphenicol resistance gene leader peptide Response_reg PF00072.24 ORF24590 - 0.0025 18.0 0.1 0.0077 16.4 0.1 1.7 1 1 0 1 1 1 1 Response regulator receiver domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks326.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks326.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks326.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks326.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:21:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SprB PF13573.6 ORF23343 - 0.087 12.6 0.5 0.38 10.6 0.5 2.0 1 1 0 1 1 1 0 SprB repeat Endotoxin_N PF03945.14 ORF23177 - 0.017 14.8 1.1 0.018 14.8 1.1 1.1 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain Phage_TAC_12 PF12363.8 ORF23177 - 0.032 14.7 0.6 0.038 14.4 0.6 1.0 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC bZIP_1 PF00170.21 ORF23177 - 0.11 12.6 0.6 0.24 11.5 0.6 1.6 1 0 0 1 1 1 0 bZIP transcription factor TMEM206 PF15122.6 ORF23115 - 0.48 9.5 4.1 0.56 9.3 4.1 1.0 1 0 0 1 1 1 0 TMEM206 protein family Mid2 PF04478.12 ORF22999 - 0.68 9.8 2.3 0.87 9.4 2.3 1.1 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor DUF3574 PF12098.8 ORF22969 - 0.16 11.8 0.2 0.18 11.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3574) USP19_linker PF16602.5 ORF22214 - 0.081 13.5 0.1 0.097 13.2 0.1 1.1 1 0 0 1 1 1 0 Linker region of USP19 deubiquitinase Doppel PF11466.8 ORF22214 - 0.12 12.1 3.0 0.25 11.0 3.0 1.6 1 0 0 1 1 1 0 Prion-like protein Doppel STAT1_TAZ2bind PF12162.8 ORF21914 - 0.012 15.2 0.6 0.023 14.2 0.6 1.5 1 0 0 1 1 1 0 STAT1 TAZ2 binding domain Response_reg PF00072.24 ORF2070 - 0.00062 19.9 0.1 0.002 18.3 0.1 1.7 1 1 0 1 1 1 1 Response regulator receiver domain Peripla_BP_4 PF13407.6 ORF2070 - 0.041 13.4 0.0 0.043 13.4 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding protein domain Elf4 PF07011.11 ORF2022 - 0.018 14.9 2.2 0.023 14.6 2.2 1.2 1 0 0 1 1 1 0 Early Flowering 4 domain DUF4922 PF16269.5 ORF19922 - 0.027 14.3 0.6 0.029 14.2 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4922) RE_HindVP PF09519.10 ORF19877 - 0.081 11.9 0.0 0.087 11.8 0.0 1.0 1 0 0 1 1 1 0 HindVP restriction endonuclease NCD3G PF07562.14 ORF19856 - 0.0041 17.1 0.1 0.0075 16.2 0.0 1.6 2 0 0 2 2 2 1 Nine Cysteines Domain of family 3 GPCR 2OG-FeII_Oxy_4 PF13661.6 ORF19846 - 4.7e-05 24.0 0.1 6.9e-05 23.4 0.1 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_3 PF13640.6 ORF19846 - 0.00016 22.5 0.1 0.00023 22.0 0.1 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF4834 PF16118.5 ORF19832 - 0.051 14.5 1.1 0.065 14.2 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF1687 PF07955.11 ORF1881 - 0.0091 16.5 1.1 0.011 16.3 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1687) HU-CCDC81_bac_2 PF18175.1 ORF1881 - 0.024 14.5 0.6 0.046 13.6 0.2 1.7 1 1 1 2 2 2 0 CCDC81-like prokaryotic HU domain 2 DUF745 PF05335.13 ORF1881 - 0.033 13.9 1.6 0.037 13.8 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF745) Dor1 PF04124.12 ORF1881 - 0.038 12.7 3.9 0.038 12.7 3.9 1.0 1 0 0 1 1 1 0 Dor1-like family YtxH PF12732.7 ORF1881 - 0.25 11.9 1.6 0.36 11.4 1.6 1.4 1 1 0 1 1 1 0 YtxH-like protein Ly49 PF08391.10 ORF1881 - 0.44 10.9 4.6 0.45 10.9 4.6 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region Methyltransf_23 PF13489.6 ORF18658 - 0.033 14.0 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain DUF639 PF04842.12 ORF18209 - 0.1 12.0 0.0 0.1 12.0 0.0 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) DUF4801 PF16059.5 ORF17278 - 0.35 10.9 6.4 0.48 10.4 6.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) DUF412 PF04217.13 ORF17190 - 0.02 14.8 0.1 0.021 14.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF412 EamA PF00892.20 ORF16834 - 2.1e-05 24.7 1.7 2.4e-05 24.6 1.7 1.1 1 0 0 1 1 1 1 EamA-like transporter family ATP-synt_ab PF00006.25 ORF16604 - 3.1e-16 59.7 0.1 3.3e-16 59.6 0.1 1.0 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain DUF2630 PF10944.8 ORF14881 - 0.073 13.5 1.0 0.098 13.1 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) Calponin PF00402.18 ORF14487 - 0.086 12.5 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 Calponin family repeat Holin_BlyA PF05102.12 ORF14029 - 0.0058 16.6 0.2 0.0085 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family DUF2019 PF09450.10 ORF13170 - 0.03 14.3 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2019) MRNIP PF15749.5 ORF13170 - 0.12 13.1 0.0 0.14 12.9 0.0 1.1 1 0 0 1 1 1 0 MRN-interacting protein DUF5375 PF17345.2 ORF12310 - 0.095 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5375) Dicer_dimer PF03368.14 ORF12176 - 0.02 15.1 0.1 0.026 14.7 0.1 1.3 1 0 0 1 1 1 0 Dicer dimerisation domain Glyco_hydro_99 PF16317.5 ORF11929 - 1.5e-15 57.2 0.2 1.6e-15 57.1 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 99 Glyco_tran_WbsX PF14307.6 ORF11929 - 0.0015 18.1 0.0 0.0021 17.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase WbsX Glyco_hydro_71 PF03659.14 ORF11929 - 0.051 12.4 0.3 0.053 12.3 0.3 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 71 Herpes_pp85 PF04637.12 ORF11874 - 3.6 5.9 4.1 4.1 5.7 4.1 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF3913 PF13052.6 ORF1170 - 0.015 15.6 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3913) fn1 PF00039.18 ORF112502 - 0.11 12.7 0.2 0.16 12.2 0.2 1.2 1 0 0 1 1 1 0 Fibronectin type I domain ETF_QO PF05187.13 ORF112333 - 8.5e-29 99.7 2.8 9.6e-29 99.6 2.8 1.0 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_7 PF12838.7 ORF112333 - 0.0016 19.0 1.6 0.0021 18.6 1.6 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF112333 - 0.0026 17.9 1.0 0.0032 17.6 1.0 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF112333 - 0.0031 17.6 1.9 0.0046 17.1 1.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF112333 - 0.0098 16.4 1.0 0.012 16.1 1.0 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF112333 - 0.022 14.8 0.6 0.022 14.8 0.6 1.9 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 ORF112333 - 0.023 14.8 3.2 0.032 14.4 3.2 1.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF112333 - 0.036 14.1 2.2 0.053 13.6 0.7 1.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 ORF112333 - 0.25 11.9 3.5 0.43 11.2 1.4 2.0 2 0 0 2 2 2 0 4Fe-4S binding domain DUF3106 PF11304.8 ORF112272 - 0.046 14.2 0.0 0.051 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3106) Opy2 PF09463.10 ORF112003 - 0.057 13.7 1.9 0.085 13.2 1.9 1.3 1 0 0 1 1 1 0 Opy2 protein Pectate_lyase_2 PF06917.12 ORF111820 - 0.14 10.8 0.0 0.16 10.5 0.0 1.0 1 0 0 1 1 1 0 Periplasmic pectate lyase DUF3431 PF11913.8 ORF110178 - 0.15 11.8 4.6 1.9 8.2 0.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3431) RVT_connect PF06815.13 ORF110178 - 1.2 9.4 9.2 0.55 10.5 4.1 2.0 1 1 1 2 2 2 0 Reverse transcriptase connection domain Insulin_TMD PF17870.1 ORF110005 - 0.0013 18.8 0.6 0.0018 18.3 0.6 1.2 1 0 0 1 1 1 1 Insulin receptor trans-membrane segment LRR19-TM PF15176.6 ORF110005 - 0.0066 16.4 0.0 0.0089 16.0 0.0 1.2 1 0 0 1 1 1 1 Leucine-rich repeat family 19 TM domain COX4 PF02936.14 ORF110005 - 0.027 14.5 0.0 0.032 14.3 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV DUF2852 PF11014.8 ORF110005 - 0.032 14.4 0.0 0.034 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) EphA2_TM PF14575.6 ORF110005 - 0.075 13.9 0.2 0.1 13.5 0.2 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain SPC12 PF06645.13 ORF110005 - 0.088 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Syndecan PF01034.20 ORF110005 - 0.29 11.1 1.7 0.58 10.1 1.7 1.5 1 0 0 1 1 1 0 Syndecan domain Transposase_20 PF02371.16 ORF109705 - 0.073 13.4 0.3 0.1 12.9 0.3 1.3 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family Fer2 PF00111.27 ORF109476 - 0.13 12.2 1.1 4.5 7.3 0.1 2.2 1 1 1 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Methyltransf_21 PF05050.12 ORF10942 - 1.9e-05 24.7 0.0 2.2e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain Aa_trans PF01490.18 ORF109285 - 3.4e-07 29.3 0.6 3.5e-07 29.3 0.6 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein HisKA_7TM PF16927.5 ORF109285 - 0.051 13.6 0.4 0.055 13.5 0.4 1.0 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase DUF3295 PF11702.8 ORF109096 - 0.38 10.0 3.4 0.42 9.9 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) ATP-synt_C PF00137.21 ORF108850 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF108850 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 CHCH PF06747.13 ORF108581 - 0.0067 16.5 0.2 0.012 15.7 0.2 1.3 1 0 0 1 1 1 1 CHCH domain TMEM132D_C PF15706.5 ORF108411 - 0.2 11.5 2.8 0.11 12.3 1.3 1.4 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term zf-ribbon_3 PF13248.6 ORF108193 - 1.6 8.3 7.6 8.2 6.0 0.2 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF108193 - 7.7 6.6 13.1 1.9 8.6 3.0 2.6 2 1 0 2 2 2 0 Transposase zinc-ribbon domain PurK_C PF17769.1 ORF108106 - 0.044 13.5 0.3 0.067 12.9 0.3 1.3 1 0 0 1 1 1 0 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATPase-cat_bd PF12156.8 ORF108106 - 1.3 9.9 10.4 5.8 7.7 1.4 2.2 1 1 1 2 2 2 0 Putative metal-binding domain of cation transport ATPase Zn_Tnp_IS1595 PF12760.7 ORF108106 - 2.6 8.1 12.0 0.69 9.9 2.0 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain TMEM132D_C PF15706.5 ORF108052 - 0.028 14.2 0.0 0.036 13.9 0.0 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Pox_G7 PF05503.12 ORF10776 - 0.17 10.8 1.5 0.19 10.7 1.5 1.0 1 0 0 1 1 1 0 Poxvirus G7-like GYF_2 PF14237.6 ORF107212 - 2.3e-06 27.3 0.2 3.6e-05 23.5 0.0 2.1 2 0 0 2 2 2 1 GYF domain 2 LisH PF08513.11 ORF107029 - 7.1e-11 41.7 0.2 1.2e-10 40.9 0.2 1.4 1 0 0 1 1 1 1 LisH HBD PF18534.1 ORF106942 - 0.092 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Helical bundle domain Aldo_ket_red PF00248.21 ORF106509 - 0.028 13.6 0.0 0.036 13.3 0.0 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family UPF0060 PF02694.15 ORF106268 - 0.027 14.7 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family Peptidase_C2 PF00648.21 ORF105997 - 2.3e-08 33.4 0.0 2.6e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease HECT PF00632.25 ORF105602 - 5.1e-15 55.7 0.0 5.5e-15 55.6 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Pkinase PF00069.25 ORF105421 - 4.1e-08 32.9 0.0 4.2e-08 32.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Apocytochr_F_C PF01333.19 ORF104787 - 0.15 12.1 0.2 0.17 11.9 0.2 1.1 1 0 0 1 1 1 0 Apocytochrome F, C-terminal TcpE PF12648.7 ORF103882 - 0.38 11.3 4.4 0.41 11.2 4.4 1.2 1 0 0 1 1 1 0 TcpE family UL2 PF08196.11 ORF103882 - 1.8 8.6 6.4 0.75 9.8 1.3 2.2 1 1 1 2 2 2 0 UL2 protein Tektin PF03148.14 ORF103826 - 0.0013 17.6 3.4 0.0014 17.5 3.4 1.0 1 0 0 1 1 1 1 Tektin family CENP-F_leu_zip PF10473.9 ORF103826 - 0.0033 17.4 5.3 0.0043 17.1 5.3 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TMF_TATA_bd PF12325.8 ORF103826 - 0.0037 17.5 2.5 0.0045 17.2 2.5 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding HAP1_N PF04849.13 ORF103826 - 0.0068 15.7 3.2 0.0074 15.5 3.2 1.2 1 0 0 1 1 1 1 HAP1 N-terminal conserved region FapA PF03961.13 ORF103826 - 0.0073 15.0 2.2 0.0082 14.8 2.2 1.0 1 0 0 1 1 1 1 Flagellar Assembly Protein A Scaffolding_pro PF11418.8 ORF103826 - 0.0076 16.8 0.7 0.0084 16.6 0.7 1.1 1 0 0 1 1 1 1 Phi29 scaffolding protein GAS PF13851.6 ORF103826 - 0.0085 15.5 5.0 0.011 15.1 5.0 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding DUF2968 PF11180.8 ORF103826 - 0.0089 15.7 3.7 0.0095 15.6 3.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2968) APG6_N PF17675.1 ORF103826 - 0.009 16.5 2.6 0.01 16.3 2.6 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region DUF5082 PF16888.5 ORF103826 - 0.0092 16.3 3.0 0.013 15.8 3.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) DUF3450 PF11932.8 ORF103826 - 0.017 14.4 2.8 0.017 14.4 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1465 PF07323.12 ORF103826 - 0.019 14.8 1.0 0.033 14.0 0.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1465) Fib_alpha PF08702.10 ORF103826 - 0.019 15.1 3.7 0.021 15.0 3.7 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family ZapB PF06005.12 ORF103826 - 0.027 14.9 5.5 0.036 14.5 5.5 1.3 1 0 0 1 1 1 0 Cell division protein ZapB DUF724 PF05266.14 ORF103826 - 0.05 13.4 2.2 0.059 13.2 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) His_binding PF02098.16 ORF103826 - 0.063 13.3 0.3 0.067 13.2 0.3 1.1 1 0 0 1 1 1 0 Tick histamine binding protein FlaC_arch PF05377.11 ORF103826 - 0.082 13.3 2.9 0.34 11.3 3.0 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Macoilin PF09726.9 ORF103826 - 0.1 11.1 5.7 0.11 11.0 5.7 1.0 1 0 0 1 1 1 0 Macoilin family XhlA PF10779.9 ORF103826 - 0.21 11.8 4.1 0.29 11.4 2.9 1.7 1 1 1 2 2 2 0 Haemolysin XhlA DUF5320 PF17253.2 ORF103826 - 0.27 12.3 0.9 0.3 12.2 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5320) DivIC PF04977.15 ORF103826 - 0.91 9.3 8.0 3.7 7.4 7.6 2.0 1 1 0 1 1 1 0 Septum formation initiator GIT_CC PF16559.5 ORF103826 - 1.5 8.7 11.1 2.7 7.9 8.2 2.2 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor bZIP_2 PF07716.15 ORF103826 - 5.3 7.2 9.9 2.7 8.1 7.1 2.0 2 1 0 2 2 2 0 Basic region leucine zipper PRKCSH_1 PF13015.6 ORF102964 - 0.25 11.0 0.7 0.33 10.6 0.4 1.4 1 1 1 2 2 2 0 Glucosidase II beta subunit-like protein zf-TRM13_CCCH PF11722.8 ORF102964 - 0.97 9.3 7.0 6.3 6.7 1.6 2.4 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein Atg8 PF02991.16 ORF102539 - 3.6e-18 65.7 0.7 4e-18 65.5 0.7 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like SoDot-IcmSS PF16848.5 ORF102539 - 0.083 12.9 0.2 0.09 12.7 0.2 1.2 1 0 0 1 1 1 0 Substrate of the Dot/Icm secretion system, putative Hamartin PF04388.12 ORF10250 - 3.9 6.0 5.5 4.4 5.8 5.5 1.0 1 0 0 1 1 1 0 Hamartin protein Mut7-C PF01927.16 ORF102453 - 0.019 15.1 0.9 0.02 15.0 0.9 1.0 1 0 0 1 1 1 0 Mut7-C RNAse domain Orthopox_B11R PF07033.11 ORF102453 - 0.13 12.1 1.8 0.29 10.9 1.8 1.7 1 1 0 1 1 1 0 Orthopoxvirus B11R protein ShK PF01549.24 ORF1024 - 0.17 12.4 3.2 2.4 8.8 0.3 2.2 2 0 0 2 2 2 0 ShK domain-like DUF5018 PF16410.5 ORF101821 - 0.047 12.4 0.0 0.049 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5018) SnoaL_3 PF13474.6 ORF1016 - 0.051 13.8 0.0 0.061 13.6 0.0 1.2 1 1 0 1 1 1 0 SnoaL-like domain DUF1492 PF07374.11 ORF101485 - 0.079 13.1 1.1 0.13 12.5 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) RseC_MucC PF04246.12 ORF101132 - 0.017 15.1 3.3 0.02 14.8 3.3 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC HA70_C PF17993.1 ORF100814 - 0.026 14.6 0.1 0.029 14.4 0.1 1.2 1 0 0 1 1 1 0 Haemagglutinin 70 C-terminal domain ICAT PF06384.11 ORF100814 - 0.12 12.6 0.0 0.14 12.4 0.0 1.0 1 0 0 1 1 1 0 Beta-catenin-interacting protein ICAT Pkinase_Tyr PF07714.17 ORF100736 - 0.022 14.0 0.0 0.028 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase RecO_N PF11967.8 ORF10040 - 0.13 12.2 0.2 0.27 11.2 0.0 1.5 2 0 0 2 2 2 0 Recombination protein O N terminal Holin_BlyA PF05102.12 ORF100390 - 0.0058 16.6 0.2 0.0085 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family Complex1_LYR PF05347.15 ORF100101 - 0.015 15.3 2.5 0.025 14.6 2.4 1.6 1 1 0 1 1 1 0 Complex 1 protein (LYR family) ETF_QO PF05187.13 ORF100101 - 0.056 13.6 0.1 0.061 13.5 0.1 1.1 1 0 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S TMEM154 PF15102.6 NODE_71842_length_220_cov_0.848649_g63901_i0reverse_frame_1 - 9.2 6.2 7.7 10 6.1 7.7 1.1 1 0 0 1 1 1 0 TMEM154 protein family Dicty_REP PF05086.12 NODE_71842_length_220_cov_0.848649_g63901_i0reverse_frame_1 - 9.9 4.0 9.8 9.1 4.1 9.8 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein CSG2 PF16965.5 NODE_71840_length_220_cov_0.859459_g63899_i0reverse_frame_1 - 0.15 11.0 0.0 0.18 10.7 0.0 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator Integrase_1 PF12835.7 NODE_71837_length_220_cov_0.864865_g63896_i0forward_frame_1 - 0.031 14.4 0.4 0.033 14.3 0.4 1.2 1 0 0 1 1 1 0 Integrase ICL PF00463.21 NODE_71833_length_220_cov_0.864865_g63892_i0forward_frame_1 - 0.00025 19.7 0.0 0.00026 19.6 0.0 1.0 1 0 0 1 1 1 1 Isocitrate lyase family Cys_rich_VLP PF14194.6 NODE_71810_length_220_cov_1.059459_g63869_i0forward_frame_1 - 0.089 12.9 0.9 0.15 12.2 0.9 1.3 1 0 0 1 1 1 0 Cysteine-rich VLP DUF723 PF05265.13 NODE_71802_length_220_cov_1.151351_g63861_i0reverse_frame_1 - 0.18 11.7 1.1 0.21 11.5 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF723) Fer4_21 PF14697.6 NODE_71794_length_220_cov_1.205405_g63853_i0reverse_frame_1 - 0.04 14.0 0.5 0.057 13.6 0.5 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain Pro_3_hydrox_C PF05373.11 NODE_71785_length_220_cov_1.275676_g63844_i0reverse_frame_1 - 0.031 14.3 0.1 0.036 14.1 0.1 1.1 1 0 0 1 1 1 0 L-proline 3-hydroxylase, C-terminal PSII PF00421.19 NODE_71783_length_220_cov_1.286486_g63842_i0forward_frame_1 - 0.004 15.9 0.0 0.0041 15.8 0.0 1.0 1 0 0 1 1 1 1 Photosystem II protein cNMP_binding PF00027.29 NODE_71782_length_220_cov_1.286486_g63841_i0forward_frame_1 - 0.011 15.8 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Glu_cys_ligase PF04262.14 NODE_71775_length_220_cov_1.297297_g63834_i0reverse_frame_1 - 0.0028 16.3 0.2 0.0033 16.1 0.2 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase DUF3993 PF13158.6 NODE_71747_length_220_cov_1.410811_g63806_i0forward_frame_1 - 0.13 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3993) Sec15 PF04091.12 NODE_71744_length_220_cov_1.421622_g63803_i0forward_frame_1 - 0.0062 16.0 0.1 0.0071 15.8 0.1 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DUF3309 PF11752.8 NODE_71742_length_220_cov_1.432432_g63801_i0forward_frame_1 - 0.14 12.2 0.1 0.25 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3309) FA_synthesis PF02504.15 NODE_71740_length_220_cov_1.443243_g63799_i0reverse_frame_1 - 3.5e-18 65.7 0.0 3.8e-18 65.6 0.0 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein CaATP_NAI PF12515.8 NODE_71736_length_220_cov_1.486486_g63795_i0reverse_frame_1 - 0.13 11.9 0.1 0.23 11.1 0.1 1.4 1 0 0 1 1 1 0 Ca2+-ATPase N terminal autoinhibitory domain Zn-ribbon_8 PF09723.10 NODE_71728_length_220_cov_1.518919_g63787_i0reverse_frame_1 - 0.49 10.5 3.8 0.64 10.2 1.1 2.3 2 1 0 2 2 2 0 Zinc ribbon domain EF1G PF00647.19 NODE_71726_length_220_cov_1.529730_g63785_i0reverse_frame_1 - 0.028 14.5 1.4 0.033 14.2 1.4 1.0 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain DUF3561 PF12084.8 NODE_71711_length_220_cov_1.675676_g63770_i0reverse_frame_1 - 0.031 14.3 0.0 0.035 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3561) U3snoRNP10 PF12397.8 NODE_71711_length_220_cov_1.675676_g63770_i0reverse_frame_1 - 0.08 13.3 0.0 0.08 13.3 0.0 1.2 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 10 Pkinase PF00069.25 NODE_71691_length_220_cov_1.762162_g63750_i0forward_frame_1 - 1.3e-07 31.3 0.0 1.3e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Glyoxalase PF00903.25 NODE_71691_length_220_cov_1.762162_g63750_i0forward_frame_1 - 0.077 13.2 0.0 0.089 13.0 0.0 1.1 1 0 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Pkinase_Tyr PF07714.17 NODE_71691_length_220_cov_1.762162_g63750_i0forward_frame_1 - 0.13 11.5 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase RecU PF03838.14 NODE_71686_length_220_cov_1.810811_g63745_i0reverse_frame_1 - 0.055 13.5 1.4 0.065 13.2 1.4 1.1 1 0 0 1 1 1 0 Recombination protein U CNOT1_TTP_bind PF16417.5 NODE_71686_length_220_cov_1.810811_g63745_i0reverse_frame_1 - 0.068 12.3 2.3 0.073 12.3 2.3 1.0 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Astro_capsid_p PF12226.8 NODE_71684_length_220_cov_1.837838_g63743_i0forward_frame_1 - 0.27 10.4 0.8 0.3 10.2 0.8 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF2721 PF11026.8 NODE_71682_length_220_cov_1.848649_g63741_i0forward_frame_1 - 0.0039 17.1 0.2 0.0044 16.9 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2721) KASH PF10541.9 NODE_71679_length_220_cov_1.908108_g63738_i0reverse_frame_1 - 0.046 14.0 4.3 0.063 13.6 4.3 1.2 1 0 0 1 1 1 0 Nuclear envelope localisation domain Ly49 PF08391.10 NODE_71679_length_220_cov_1.908108_g63738_i0reverse_frame_1 - 0.094 13.1 0.6 0.1 12.9 0.6 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region RVT_1 PF00078.27 NODE_71676_length_220_cov_1.940541_g63735_i0reverse_frame_1 - 0.0004 20.0 0.1 0.00041 19.9 0.1 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) ErmC PF06308.11 NODE_71671_length_220_cov_2.016216_g63730_i0forward_frame_1 - 0.095 13.1 1.1 0.16 12.3 1.1 1.3 1 0 0 1 1 1 0 23S rRNA methylastransferase leader peptide (ErmCL) Tox-REase-2 PF15646.6 NODE_71665_length_220_cov_2.048649_g63724_i0reverse_frame_1 - 0.037 14.2 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 Multi_Drug_Res PF00893.19 NODE_71663_length_220_cov_2.064865_g63722_i0forward_frame_1 - 1.7e-24 86.3 1.9 1.8e-24 86.2 1.9 1.0 1 0 0 1 1 1 1 Small Multidrug Resistance protein Flg_bb_rod PF00460.20 NODE_71660_length_220_cov_2.086486_g63719_i0forward_frame_1 - 0.053 13.5 0.6 1.2 9.1 0.2 2.1 2 0 0 2 2 2 0 Flagella basal body rod protein Gly_transf_sug PF04488.15 NODE_71637_length_220_cov_2.378378_g63696_i0reverse_frame_1 - 2e-05 25.2 0.0 2.3e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase sugar-binding region containing DXD motif LRR_5 PF13306.6 NODE_71626_length_220_cov_2.545946_g63685_i0forward_frame_1 - 0.024 14.6 3.2 0.025 14.5 3.2 1.0 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) Transformer PF06495.11 NODE_71615_length_220_cov_2.810811_g63674_i0forward_frame_1 - 0.0011 19.1 0.5 0.0011 19.1 0.5 1.0 1 0 0 1 1 1 1 Fruit fly transformer protein DUF3677 PF12432.8 NODE_71611_length_220_cov_2.983784_g63670_i0reverse_frame_1 - 0.0021 18.3 0.6 0.0027 18.0 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3677) Importin_rep_4 PF18808.1 NODE_71607_length_220_cov_3.167568_g63666_i0forward_frame_1 - 5.8e-08 32.9 0.3 5.9e-08 32.9 0.3 1.1 1 0 0 1 1 1 1 Importin repeat DnaG_DnaB_bind PF08278.11 NODE_71600_length_220_cov_3.751351_g63659_i0reverse_frame_1 - 0.00011 22.8 2.0 0.00012 22.7 0.6 1.7 2 0 0 2 2 2 1 DNA primase DnaG DnaB-binding DUF807 PF05660.11 NODE_71585_length_220_cov_14.837838_g63644_i0reverse_frame_1 - 0.025 14.6 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 Coxiella burnetii protein of unknown function (DUF807) Ribosomal_S11 PF00411.19 NODE_71577_length_220_cov_24.659459_g63636_i0forward_frame_1 - 0.00095 19.5 0.1 0.0015 18.9 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S11 AAA_lid_4 PF17864.1 NODE_71574_length_220_cov_30.086486_g63633_i0forward_frame_1 - 0.3 10.9 5.2 6.1 6.7 1.5 2.1 1 1 1 2 2 2 0 RuvB AAA lid domain DUF410 PF04190.13 NODE_71569_length_220_cov_36.924324_g63628_i0reverse_frame_1 - 5.8e-05 23.0 0.3 7.1e-05 22.7 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF410) DUF2838 PF10998.8 NODE_71565_length_220_cov_41.686486_g63624_i0forward_frame_1 - 0.038 14.2 3.3 0.047 13.9 3.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) PL48 PF15903.5 NODE_71563_length_220_cov_42.464865_g63622_i0forward_frame_1 - 0.19 10.6 0.0 0.22 10.4 0.0 1.1 1 0 0 1 1 1 0 Filopodia upregulated, FAM65 FXR_C1 PF16096.5 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 0.09 13.0 5.1 0.12 12.6 5.0 1.4 1 1 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 DTHCT PF08070.11 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 0.13 13.1 17.8 0.17 12.7 17.8 1.2 1 0 0 1 1 1 0 DTHCT (NUC029) region RNA_polI_A34 PF08208.11 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 0.91 9.6 18.1 1.1 9.3 18.1 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 YqfQ PF14181.6 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 5.8 7.1 10.0 6.7 6.9 10.0 1.2 1 0 0 1 1 1 0 YqfQ-like protein CDC45 PF02724.14 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 6.1 5.0 14.8 6.8 4.8 14.8 1.0 1 0 0 1 1 1 0 CDC45-like protein Glucan_synthase PF02364.15 NODE_71558_length_220_cov_45.616216_g63617_i0reverse_frame_1 - 0.06 11.5 1.7 0.061 11.5 1.7 1.0 1 0 0 1 1 1 0 1,3-beta-glucan synthase component ThiF PF00899.21 NODE_71555_length_220_cov_48.227027_g63614_i0forward_frame_1 - 0.028 13.8 0.4 0.033 13.5 0.4 1.1 1 0 0 1 1 1 0 ThiF family Gemin7 PF11095.8 NODE_71547_length_220_cov_56.972973_g63606_i0reverse_frame_1 - 0.085 12.8 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Gem-associated protein 7 (Gemin7) HCV_NS5a_1a PF08300.13 NODE_71546_length_220_cov_57.124324_g63605_i0forward_frame_1 - 0.039 14.1 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a zinc finger domain DUF485 PF04341.12 NODE_71539_length_220_cov_65.081081_g63598_i0reverse_frame_1 - 0.063 13.2 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 YajC PF02699.15 NODE_71539_length_220_cov_65.081081_g63598_i0reverse_frame_1 - 0.07 13.0 1.3 0.091 12.7 1.3 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit Zn_ribbon_SprT PF17283.2 NODE_71529_length_220_cov_81.648649_g63588_i0forward_frame_1 - 0.75 9.8 6.8 1.2 9.1 6.8 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain LacY_symp PF01306.19 NODE_71528_length_220_cov_82.502703_g63587_i0reverse_frame_1 - 0.084 11.6 1.0 0.095 11.5 1.0 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter Ribosomal_S27e PF01667.17 NODE_71523_length_220_cov_104.945946_g63582_i0forward_frame_1 - 0.0064 16.2 0.4 0.0064 16.2 0.4 1.6 2 0 0 2 2 2 1 Ribosomal protein S27 NECFESHC PF16621.5 NODE_71501_length_221_cov_0.860215_g63560_i0forward_frame_1 - 3.4 7.7 6.9 2.9 7.9 0.6 2.2 2 0 0 2 2 2 0 SH3 terminal domain of 2nd SH3 on Neutrophil cytosol factor 1 DUF910 PF06014.11 NODE_71487_length_221_cov_1.064516_g63546_i0forward_frame_1 - 0.017 15.1 2.2 0.71 9.9 0.2 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF910) Ion_trans PF00520.31 NODE_71481_length_221_cov_1.080645_g63540_i0reverse_frame_1 - 2.2e-09 36.9 0.7 2.3e-09 36.9 0.7 1.0 1 0 0 1 1 1 1 Ion transport protein LptF_LptG PF03739.14 NODE_71467_length_221_cov_1.252688_g63526_i0forward_frame_1 - 1.2e-12 47.4 1.2 1.3e-12 47.2 1.2 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG PTS_EIIC_2 PF13303.6 NODE_71467_length_221_cov_1.252688_g63526_i0forward_frame_1 - 0.00023 20.3 1.3 0.00025 20.2 1.3 1.0 1 0 0 1 1 1 1 Phosphotransferase system, EIIC EMP70 PF02990.16 NODE_71467_length_221_cov_1.252688_g63526_i0forward_frame_1 - 0.11 11.1 1.4 0.12 11.0 1.4 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 ketoacyl-synt PF00109.26 NODE_71458_length_221_cov_1.284946_g63517_i0reverse_frame_1 - 0.0077 15.8 0.0 0.0084 15.7 0.0 1.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain MetRS-N PF09635.10 NODE_71453_length_221_cov_1.290323_g63512_i0reverse_frame_1 - 0.086 13.4 0.1 0.09 13.3 0.1 1.1 1 0 0 1 1 1 0 MetRS-N binding domain DUF3464 PF11947.8 NODE_71453_length_221_cov_1.290323_g63512_i0forward_frame_1 - 0.047 13.4 0.3 0.063 13.0 0.3 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 IMUP PF15761.5 NODE_71449_length_221_cov_1.290323_g63508_i0reverse_frame_1 - 0.65 10.7 12.6 0.74 10.5 12.6 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_71449_length_221_cov_1.290323_g63508_i0reverse_frame_1 - 2.8 7.5 15.6 2.9 7.4 15.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Cytochrom_C1 PF02167.15 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_1 - 0.00075 19.3 0.1 0.00081 19.2 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C1 family GCV_H PF01597.19 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_1 - 0.02 14.8 0.2 0.027 14.4 0.2 1.2 1 0 0 1 1 1 0 Glycine cleavage H-protein DUF1514 PF07438.11 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_1 - 0.073 13.0 0.3 8.9 6.3 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1514) Peptidase_S49 PF01343.18 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_1 - 0.1 12.6 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Peptidase family S49 TFB6 PF17110.5 NODE_71435_length_221_cov_1.338710_g63494_i0reverse_frame_1 - 0.04 13.7 0.9 0.05 13.3 0.9 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF2544 PF11245.8 NODE_71431_length_221_cov_1.370968_g63490_i0forward_frame_1 - 0.093 12.2 0.0 0.095 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2544) VHL PF01847.16 NODE_71427_length_221_cov_1.403226_g63486_i0reverse_frame_1 - 0.097 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 VHL beta domain TT_ORF1 PF02956.14 NODE_71423_length_221_cov_1.419355_g63482_i0forward_frame_1 - 1.4 7.5 3.9 1.6 7.3 3.9 1.0 1 0 0 1 1 1 0 TT viral orf 1 Baculo_LEF-2 PF03041.14 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_1 - 0.041 13.5 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 lef-2 DUF2034 PF10356.9 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_1 - 0.049 13.1 3.2 0.053 13.0 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2034) Vps39_2 PF10367.9 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_1 - 0.06 13.8 2.0 0.068 13.6 2.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 Eapp_C PF10238.9 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_1 - 0.23 11.5 4.0 0.26 11.4 4.0 1.0 1 0 0 1 1 1 0 E2F-associated phosphoprotein Ost4 PF10215.9 NODE_71415_length_221_cov_1.467742_g63474_i0forward_frame_1 - 0.061 13.2 0.4 0.13 12.1 0.4 1.6 1 0 0 1 1 1 0 Oligosaccaryltransferase DUF4661 PF15576.6 NODE_71413_length_221_cov_1.500000_g63472_i0reverse_frame_1 - 0.39 10.6 1.2 0.49 10.3 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) GMC_oxred_N PF00732.19 NODE_71411_length_221_cov_1.516129_g63470_i0reverse_frame_1 - 9e-11 41.7 0.0 9.6e-11 41.6 0.0 1.0 1 0 0 1 1 1 1 GMC oxidoreductase MSP1_C PF07462.11 NODE_71408_length_221_cov_1.548387_g63467_i0reverse_frame_1 - 0.81 8.3 1.9 0.88 8.2 1.9 1.0 1 0 0 1 1 1 0 Merozoite surface protein 1 (MSP1) C-terminus DUF192 PF02643.15 NODE_71405_length_221_cov_1.559140_g63464_i0reverse_frame_1 - 0.0077 16.4 0.1 0.0083 16.3 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 DUF4118 PF13493.6 NODE_71403_length_221_cov_1.580645_g63462_i0forward_frame_1 - 0.083 12.7 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) MCU PF04678.13 NODE_71399_length_221_cov_1.618280_g63458_i0reverse_frame_1 - 0.0064 16.6 0.6 0.0078 16.3 0.6 1.1 1 0 0 1 1 1 1 Mitochondrial calcium uniporter DUF2487 PF10673.9 NODE_71399_length_221_cov_1.618280_g63458_i0reverse_frame_1 - 0.05 13.6 0.2 0.056 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2487) DUF2380 PF09533.10 NODE_71393_length_221_cov_1.688172_g63452_i0reverse_frame_1 - 0.15 11.7 0.5 0.17 11.5 0.5 1.3 1 1 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) CobW_C PF07683.14 NODE_71389_length_221_cov_1.715054_g63448_i0forward_frame_1 - 4.5e-08 32.9 0.0 1.7e-07 31.1 0.0 1.7 2 0 0 2 2 2 1 Cobalamin synthesis protein cobW C-terminal domain 2TM PF13239.6 NODE_71384_length_221_cov_1.720430_g63443_i0reverse_frame_1 - 0.66 10.3 3.3 0.87 9.9 3.3 1.3 1 1 0 1 1 1 0 2TM domain DUF627 PF04781.12 NODE_71383_length_221_cov_1.720430_g63442_i0forward_frame_1 - 0.15 12.1 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF627) Lamprin PF06403.11 NODE_71381_length_221_cov_1.720430_g63440_i0forward_frame_1 - 0.21 11.5 1.8 0.24 11.3 1.8 1.1 1 0 0 1 1 1 0 Lamprin DUF3197 PF11432.8 NODE_71373_length_221_cov_1.806452_g63432_i0reverse_frame_1 - 0.19 11.6 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3197) LtuA PF17446.2 NODE_71366_length_221_cov_1.860215_g63425_i0forward_frame_1 - 2.3 8.7 5.1 10 6.6 0.5 2.2 2 0 0 2 2 2 0 Late transcription unit A # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks327.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks327.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks327.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks327.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:05:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF919 PF06034.11 NODE_71357_length_221_cov_1.946237_g63416_i0forward_frame_1 - 0.064 13.1 0.0 0.082 12.8 0.0 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF919) MbtH PF03621.13 NODE_71349_length_221_cov_2.112903_g63408_i0forward_frame_1 - 0.12 11.9 1.7 1.1 8.8 0.0 2.2 2 0 0 2 2 2 0 MbtH-like protein AcMNPV_Ac109 PF05054.12 NODE_71348_length_221_cov_2.123656_g63407_i0reverse_frame_1 - 0.07 12.2 0.1 0.071 12.2 0.1 1.0 1 0 0 1 1 1 0 Autographa californica nuclear polyhedrosis virus (AcMNPV) protein VWA_N PF08399.11 NODE_71347_length_221_cov_2.123656_g63406_i0forward_frame_1 - 0.046 14.2 0.1 0.058 13.9 0.1 1.2 1 0 0 1 1 1 0 VWA N-terminal SPT16 PF08644.11 NODE_71342_length_221_cov_2.145161_g63401_i0forward_frame_1 - 0.015 15.4 0.7 0.017 15.3 0.7 1.0 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) SLATT_5 PF18160.1 NODE_71342_length_221_cov_2.145161_g63401_i0forward_frame_1 - 0.049 13.0 0.8 0.054 12.8 0.8 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Pkinase PF00069.25 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 4e-22 78.9 0.0 4.4e-22 78.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 6.8e-13 48.5 0.0 7.7e-13 48.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 0.0054 15.6 0.0 0.0059 15.4 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 0.011 14.7 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 0.026 14.5 0.2 0.031 14.2 0.2 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kinase-like PF14531.6 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 0.11 11.8 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Kinase-like AAA_30 PF13604.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 2.4e-07 30.7 0.0 2.4e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 6.6e-07 29.8 0.0 6.7e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 1.7e-05 25.2 0.0 1.7e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 7e-05 22.7 0.0 7e-05 22.7 0.0 1.0 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0002 21.3 0.0 0.00023 21.1 0.0 1.2 1 0 0 1 1 1 1 NTPase ATPase_2 PF01637.18 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0016 18.4 0.0 0.0017 18.3 0.0 1.0 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0029 17.9 0.0 0.0029 17.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0031 17.0 0.0 0.0031 17.0 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA PF00004.29 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0037 17.7 0.0 0.0041 17.5 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0047 17.5 0.0 0.0049 17.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.011 15.0 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MeaB PF03308.16 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.012 14.6 0.0 0.012 14.6 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_33 PF13671.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.012 15.7 0.2 0.019 15.1 0.2 1.4 1 1 0 1 1 1 0 AAA domain AAA_10 PF12846.7 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.014 14.3 0.0 0.015 14.2 0.0 1.0 1 0 0 1 1 1 0 AAA-like domain AAA_29 PF13555.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.02 14.6 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.035 13.7 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.037 13.6 0.0 0.049 13.2 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.046 13.1 0.0 0.046 13.1 0.0 1.1 1 0 0 1 1 1 0 KaiC AAA_17 PF13207.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.057 13.8 0.1 0.082 13.3 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.059 13.4 0.0 0.071 13.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.069 13.4 0.6 0.078 13.2 0.6 1.3 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.075 11.9 0.0 0.078 11.9 0.0 1.0 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_24 PF13479.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.079 12.7 0.0 0.088 12.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.08 13.3 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 RNA helicase ResIII PF04851.15 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.086 12.8 0.0 0.087 12.8 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit ATP_bind_1 PF03029.17 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.091 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Viral_helicase1 PF01443.18 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.092 12.5 0.1 0.097 12.4 0.1 1.1 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_14 PF13173.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.13 12.3 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.15 11.5 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein Zeta_toxin PF06414.12 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.16 11.2 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin UvrD-helicase PF00580.21 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.22 11.0 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain Humanin PF15040.6 NODE_71339_length_221_cov_2.172043_g63398_i0forward_frame_1 - 0.083 12.4 1.6 0.12 11.9 1.6 1.2 1 0 0 1 1 1 0 Humanin family Corona_S2 PF01601.16 NODE_71328_length_221_cov_2.349462_g63387_i0forward_frame_1 - 0.8 8.1 3.6 0.94 7.9 3.6 1.0 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein DUF5053 PF16476.5 NODE_71325_length_221_cov_2.381720_g63384_i0reverse_frame_1 - 0.0046 16.6 0.1 0.0072 16.0 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5053) ERGIC_N PF13850.6 NODE_71325_length_221_cov_2.381720_g63384_i0reverse_frame_1 - 0.078 13.3 0.1 0.096 13.0 0.1 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) HTH_54 PF18607.1 NODE_71324_length_221_cov_2.397849_g63383_i0reverse_frame_1 - 0.00012 22.0 0.0 0.00015 21.7 0.0 1.1 1 0 0 1 1 1 1 ParA helix turn helix domain DEK_C PF08766.11 NODE_71324_length_221_cov_2.397849_g63383_i0reverse_frame_1 - 0.009 15.9 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 DEK C terminal domain RabGAP-TBC PF00566.18 NODE_71320_length_221_cov_2.451613_g63379_i0forward_frame_1 - 0.0019 17.9 0.1 0.0019 17.9 0.1 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF2046 PF09755.9 NODE_71304_length_221_cov_2.924731_g63363_i0reverse_frame_1 - 0.016 14.4 0.1 0.02 14.2 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) DASH_Spc19 PF08287.11 NODE_71304_length_221_cov_2.924731_g63363_i0reverse_frame_1 - 0.062 13.2 0.0 0.086 12.7 0.0 1.1 1 0 0 1 1 1 0 Spc19 CP12 PF02672.15 NODE_71302_length_221_cov_3.091398_g63361_i0reverse_frame_1 - 0.022 15.5 0.1 0.026 15.3 0.1 1.2 1 0 0 1 1 1 0 CP12 domain Peptidase_M50B PF13398.6 NODE_71302_length_221_cov_3.091398_g63361_i0forward_frame_1 - 1.2 8.7 7.7 1.4 8.5 7.7 1.1 1 0 0 1 1 1 0 Peptidase M50B-like LUD_dom PF02589.15 NODE_71298_length_221_cov_3.247312_g63357_i0forward_frame_1 - 0.032 14.0 0.0 0.049 13.4 0.0 1.3 1 0 0 1 1 1 0 LUD domain rve PF00665.26 NODE_71290_length_221_cov_4.435484_g63349_i0forward_frame_1 - 0.013 15.7 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain zf-RING_5 PF14634.6 NODE_71272_length_221_cov_31.295699_g63331_i0forward_frame_1 - 0.9 9.6 9.0 1.2 9.1 9.0 1.3 1 0 0 1 1 1 0 zinc-RING finger domain DUF809 PF05663.11 NODE_71272_length_221_cov_31.295699_g63331_i0forward_frame_1 - 9.5 6.4 6.9 18 5.5 1.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF809) LMF1 PF06762.14 NODE_71271_length_221_cov_31.634409_g63330_i0forward_frame_1 - 2.7 7.0 9.0 2.8 7.0 9.0 1.1 1 0 0 1 1 1 0 Lipase maturation factor LtuA PF17446.2 NODE_71260_length_221_cov_41.107527_g63319_i0reverse_frame_1 - 0.15 12.5 0.3 0.35 11.3 0.3 1.6 1 1 0 1 1 1 0 Late transcription unit A zf-RING_7 PF02591.15 NODE_71258_length_221_cov_42.198925_g63317_i0reverse_frame_1 - 0.036 14.2 0.2 0.057 13.6 0.2 1.3 1 0 0 1 1 1 0 C4-type zinc ribbon domain PAP1 PF08601.10 NODE_71258_length_221_cov_42.198925_g63317_i0forward_frame_1 - 0.046 13.4 0.2 0.046 13.4 0.2 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 mit_SMPDase PF14724.6 NODE_71251_length_221_cov_49.360215_g63310_i0forward_frame_1 - 0.25 9.3 0.1 0.25 9.3 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial-associated sphingomyelin phosphodiesterase TIM21 PF08294.11 NODE_71247_length_221_cov_51.344086_g63306_i0forward_frame_1 - 0.13 12.2 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 TIM21 Gliadin PF13016.6 NODE_71243_length_221_cov_55.537634_g63302_i0forward_frame_1 - 0.11 12.9 4.1 0.085 13.3 3.2 1.2 1 1 0 1 1 1 0 Cys-rich Gliadin N-terminal MtaB PF12176.8 NODE_71242_length_221_cov_56.005376_g63301_i0forward_frame_1 - 0.16 10.7 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 Methanol-cobalamin methyltransferase B subunit UPF0239 PF06783.11 NODE_71238_length_221_cov_58.731183_g63297_i0reverse_frame_1 - 0.0087 16.2 0.1 0.011 15.9 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0239) DUF1043 PF06295.12 NODE_71238_length_221_cov_58.731183_g63297_i0reverse_frame_1 - 0.01 15.8 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) DUF2953 PF11167.8 NODE_71238_length_221_cov_58.731183_g63297_i0reverse_frame_1 - 0.12 12.4 0.7 0.18 11.9 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2953) DNA_ligase_OB_2 PF14743.6 NODE_71231_length_221_cov_70.376344_g63290_i0reverse_frame_1 - 0.041 13.9 0.0 0.047 13.7 0.0 1.2 1 0 0 1 1 1 0 DNA ligase OB-like domain DUF3796 PF12676.7 NODE_71213_length_221_cov_173.827957_g63272_i0forward_frame_1 - 0.7 10.3 7.9 0.77 10.2 7.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) SR-25 PF10500.9 NODE_71211_length_221_cov_246.881720_g63270_i0reverse_frame_1 - 0.12 12.0 12.2 0.12 11.9 12.2 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein FAD_binding_6 PF00970.24 NODE_71205_length_221_cov_1636.913978_g63264_i0forward_frame_1 - 5.9e-19 68.3 0.0 6.5e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain sCache_3_3 PF17202.4 NODE_71205_length_221_cov_1636.913978_g63264_i0forward_frame_1 - 0.085 13.3 0.0 0.085 13.3 0.0 1.1 1 0 0 1 1 1 0 Single cache domain 3 RNase_PH PF01138.21 NODE_71204_length_221_cov_1864.236559_g63263_i0forward_frame_1 - 0.039 14.4 0.2 0.045 14.2 0.2 1.1 1 0 0 1 1 1 0 3' exoribonuclease family, domain 1 Mucin PF01456.17 NODE_71200_length_222_cov_0.855615_g63259_i0reverse_frame_1 - 1 9.3 4.8 1 9.3 4.8 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein PCIF1_WW PF12237.8 NODE_71197_length_222_cov_0.855615_g63256_i0forward_frame_1 - 0.03 14.0 0.1 0.03 14.0 0.1 1.1 1 0 0 1 1 1 0 Phosphorylated CTD interacting factor 1 WW domain Prok-RING_1 PF14446.6 NODE_71192_length_222_cov_0.871658_g63251_i0reverse_frame_1 - 0.12 12.3 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Ovate PF04844.13 NODE_71181_length_222_cov_1.064171_g63240_i0forward_frame_1 - 0.32 11.0 3.4 0.45 10.6 3.4 1.2 1 0 0 1 1 1 0 Transcriptional repressor, ovate ANAPC8 PF04049.13 NODE_71178_length_222_cov_1.069519_g63237_i0forward_frame_1 - 0.011 15.7 0.2 0.012 15.7 0.2 1.1 1 0 0 1 1 1 0 Anaphase promoting complex subunit 8 / Cdc23 EF-hand_8 PF13833.6 NODE_71175_length_222_cov_1.149733_g63234_i0reverse_frame_1 - 0.15 11.9 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair DNA_pol_B_palm PF14792.6 NODE_71174_length_222_cov_1.155080_g63233_i0reverse_frame_1 - 3.6e-16 59.4 0.1 4e-16 59.2 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase beta palm NTP_transf_2 PF01909.23 NODE_71174_length_222_cov_1.155080_g63233_i0reverse_frame_1 - 0.038 14.3 0.0 0.07 13.4 0.0 1.5 1 1 0 1 1 1 0 Nucleotidyltransferase domain HP0268 PF18618.1 NODE_71174_length_222_cov_1.155080_g63233_i0forward_frame_1 - 0.15 12.5 0.0 0.28 11.6 0.0 1.4 1 1 0 1 1 1 0 HP0268 IMPDH PF00478.25 NODE_71170_length_222_cov_1.176471_g63229_i0reverse_frame_1 - 0.041 12.9 0.1 0.046 12.7 0.1 1.0 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain DUF5433 PF17498.2 NODE_71169_length_222_cov_1.187166_g63228_i0reverse_frame_1 - 0.18 12.0 2.4 0.36 11.1 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5433) Colicin_K PF17500.2 NODE_71169_length_222_cov_1.187166_g63228_i0forward_frame_1 - 0.012 16.2 2.8 0.013 16.0 2.8 1.1 1 0 0 1 1 1 0 Colicin-K DDE_3 PF13358.6 NODE_71167_length_222_cov_1.192513_g63226_i0reverse_frame_1 - 1.7e-10 40.8 0.0 2e-10 40.6 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease Piezo_RRas_bdg PF12166.8 NODE_71164_length_222_cov_1.197861_g63223_i0reverse_frame_1 - 1.8e-06 27.5 0.0 1.9e-06 27.5 0.0 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain Csm4_C PF17953.1 NODE_71156_length_222_cov_1.267380_g63215_i0reverse_frame_1 - 0.1 12.5 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 CRISPR Csm4 C-terminal domain Mgm101p PF06420.12 NODE_71145_length_222_cov_1.283422_g63204_i0forward_frame_1 - 0.15 11.6 0.1 0.16 11.4 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial genome maintenance MGM101 FixS PF03597.15 NODE_71141_length_222_cov_1.283422_g63200_i0reverse_frame_1 - 0.055 13.2 2.4 0.091 12.5 2.1 1.6 1 1 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type Adaptin_N PF01602.20 NODE_71132_length_222_cov_1.363636_g63191_i0forward_frame_1 - 1.9e-06 26.7 0.4 2e-06 26.7 0.4 1.0 1 0 0 1 1 1 1 Adaptin N terminal region JAB PF01398.21 NODE_71127_length_222_cov_1.406417_g63186_i0reverse_frame_1 - 0.0026 17.7 0.0 0.0027 17.7 0.0 1.1 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease DUF4170 PF13773.6 NODE_71127_length_222_cov_1.406417_g63186_i0reverse_frame_1 - 0.043 14.0 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4170) DUF2777 PF10949.8 NODE_71124_length_222_cov_1.411765_g63183_i0forward_frame_1 - 0.032 13.9 0.3 0.034 13.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) DUF1003 PF06210.11 NODE_71121_length_222_cov_1.449198_g63180_i0reverse_frame_1 - 1.4 9.1 4.1 0.78 9.9 2.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ATP-synt_8 PF00895.20 NODE_71121_length_222_cov_1.449198_g63180_i0reverse_frame_1 - 7.3 7.1 7.1 1 9.9 1.4 2.0 2 0 0 2 2 2 0 ATP synthase protein 8 WW_FCH_linker PF16623.5 NODE_71121_length_222_cov_1.449198_g63180_i0forward_frame_1 - 0.0037 18.0 0.4 0.0044 17.7 0.4 1.1 1 0 0 1 1 1 1 Unstructured linker region between on GAS7 protein Il13Ra_Ig PF18001.1 NODE_71117_length_222_cov_1.475936_g63176_i0forward_frame_1 - 0.032 14.3 1.0 0.036 14.2 1.0 1.1 1 0 0 1 1 1 0 Interleukin-13 receptor subunit alpha Ig-like domain ABC2_membrane PF01061.24 NODE_71115_length_222_cov_1.481283_g63174_i0forward_frame_1 - 3.9e-07 29.7 3.8 4.4e-07 29.5 3.8 1.0 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 NODE_71115_length_222_cov_1.481283_g63174_i0forward_frame_1 - 0.019 14.1 4.8 0.022 13.9 4.8 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein vMSA PF00695.19 NODE_71114_length_222_cov_1.497326_g63173_i0forward_frame_1 - 1.3 8.0 3.8 1.4 8.0 3.8 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Ank_4 PF13637.6 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 5e-13 49.3 0.0 5.8e-08 33.1 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 8.2e-11 41.8 0.0 0.046 14.2 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_2 PF12796.7 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 1e-10 42.0 0.0 2.7e-10 40.7 0.0 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 7.7e-08 32.5 0.4 0.0078 16.5 0.0 2.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 3.6e-07 30.0 0.0 0.45 11.2 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Urocanase_N PF17391.2 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 0.076 12.7 0.0 0.088 12.5 0.0 1.0 1 0 0 1 1 1 0 Urocanase N-terminal domain zf-dskA_traR PF01258.17 NODE_71109_length_222_cov_1.502674_g63168_i0reverse_frame_1 - 0.038 13.9 5.6 0.14 12.1 5.6 1.9 1 1 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger DUF676 PF05057.14 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 7.6e-13 48.5 0.0 8.4e-13 48.3 0.0 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 0.0011 18.7 0.0 0.0011 18.7 0.0 1.1 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 0.0045 16.9 0.0 0.0045 16.9 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Lipase_3 PF01764.25 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 0.02 14.7 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Lipase (class 3) DUF915 PF06028.11 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 0.021 14.2 0.0 0.025 13.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) Penaeidin PF05927.11 NODE_71105_length_222_cov_1.561497_g63164_i0reverse_frame_1 - 0.049 14.4 0.1 0.06 14.1 0.1 1.1 1 0 0 1 1 1 0 Penaeidin ATP-grasp_2 PF08442.10 NODE_71101_length_222_cov_1.593583_g63160_i0reverse_frame_1 - 0.044 13.3 0.0 0.051 13.1 0.0 1.0 1 0 0 1 1 1 0 ATP-grasp domain PseudoU_synth_2 PF00849.22 NODE_71100_length_222_cov_1.598930_g63159_i0forward_frame_1 - 2.9e-06 27.4 0.3 3.4e-06 27.2 0.3 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF1824 PF08854.10 NODE_71096_length_222_cov_1.620321_g63155_i0forward_frame_1 - 0.021 14.7 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1824) ORMDL PF04061.14 NODE_71095_length_222_cov_1.631016_g63154_i0forward_frame_1 - 0.003 17.4 0.0 0.0031 17.3 0.0 1.0 1 0 0 1 1 1 1 ORMDL family DUF836 PF05768.14 NODE_71088_length_222_cov_1.695187_g63147_i0forward_frame_1 - 0.097 13.1 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DUF5329 PF17263.2 NODE_71088_length_222_cov_1.695187_g63147_i0forward_frame_1 - 0.12 12.5 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5329) FAM176 PF14851.6 NODE_71085_length_222_cov_1.705882_g63144_i0reverse_frame_1 - 0.072 12.8 0.1 0.074 12.7 0.1 1.0 1 0 0 1 1 1 0 FAM176 family PAP2 PF01569.21 NODE_71085_length_222_cov_1.705882_g63144_i0forward_frame_1 - 0.56 10.0 4.0 0.63 9.8 4.0 1.0 1 0 0 1 1 1 0 PAP2 superfamily Pam16 PF03656.13 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_1 - 0.24 11.4 4.1 0.27 11.3 4.1 1.1 1 0 0 1 1 1 0 Pam16 TSP_1 PF00090.19 NODE_71076_length_222_cov_1.754011_g63135_i0reverse_frame_1 - 0.028 14.6 2.8 0.051 13.8 2.8 1.4 1 0 0 1 1 1 0 Thrombospondin type 1 domain DUF4719 PF15843.5 NODE_71076_length_222_cov_1.754011_g63135_i0forward_frame_1 - 0.063 13.4 0.1 0.071 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) ERGIC_N PF13850.6 NODE_71071_length_222_cov_1.802139_g63130_i0reverse_frame_1 - 0.032 14.6 0.1 0.04 14.3 0.1 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Myc_target_1 PF15179.6 NODE_71071_length_222_cov_1.802139_g63130_i0reverse_frame_1 - 0.077 12.9 0.0 0.079 12.9 0.0 1.1 1 0 0 1 1 1 0 Myc target protein 1 Na_Pi_cotrans PF02690.15 NODE_71068_length_222_cov_1.807487_g63127_i0reverse_frame_1 - 0.0018 18.4 0.1 0.0018 18.4 0.1 1.3 2 0 0 2 2 2 1 Na+/Pi-cotransporter DUF2613 PF11021.8 NODE_71068_length_222_cov_1.807487_g63127_i0reverse_frame_1 - 0.023 14.8 4.2 0.023 14.8 4.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2613) TMIE PF16038.5 NODE_71052_length_222_cov_2.032086_g63111_i0reverse_frame_1 - 2.9 7.8 6.6 1.4 8.9 4.5 1.5 1 1 0 1 1 1 0 TMIE protein BRK PF07533.16 NODE_71049_length_222_cov_2.053476_g63108_i0forward_frame_1 - 0.059 13.0 0.7 0.25 11.0 0.1 2.1 2 1 0 2 2 2 0 BRK domain TYW3 PF02676.14 NODE_71048_length_222_cov_2.053476_g63107_i0reverse_frame_1 - 0.089 12.1 0.7 0.099 12.0 0.7 1.0 1 0 0 1 1 1 0 Methyltransferase TYW3 Toxin_36 PF10550.9 NODE_71042_length_222_cov_2.133690_g63101_i0reverse_frame_1 - 0.86 11.1 4.3 2.1 9.9 0.2 2.3 2 0 0 2 2 2 0 Conantokin-G mollusc-toxin PCO_ADO PF07847.12 NODE_71037_length_222_cov_2.192513_g63096_i0reverse_frame_1 - 0.045 13.2 0.2 0.046 13.2 0.2 1.1 1 0 0 1 1 1 0 PCO_ADO Phage_holin_3_3 PF16083.5 NODE_71032_length_222_cov_2.256684_g63091_i0forward_frame_1 - 0.1 12.7 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III AstE_AspA PF04952.14 NODE_71024_length_222_cov_2.320856_g63083_i0forward_frame_1 - 1.9e-16 60.0 0.0 2e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family SRTM1 PF15872.5 NODE_71021_length_222_cov_2.352941_g63080_i0reverse_frame_1 - 0.31 11.2 5.4 0.26 11.4 4.3 1.3 1 1 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 SwrA PF17423.2 NODE_71002_length_222_cov_2.962567_g63061_i0forward_frame_1 - 0.064 13.2 0.1 0.086 12.8 0.1 1.2 1 0 0 1 1 1 0 Swarming motility protein zf-TAZ PF02135.16 NODE_71000_length_222_cov_3.048128_g63059_i0forward_frame_1 - 0.015 15.7 0.1 0.019 15.5 0.1 1.1 1 0 0 1 1 1 0 TAZ zinc finger TMEM238 PF15125.6 NODE_70999_length_222_cov_3.106952_g63058_i0reverse_frame_1 - 0.04 14.1 0.5 0.053 13.7 0.5 1.2 1 0 0 1 1 1 0 TMEM238 protein family CytB6-F_Fe-S PF08802.10 NODE_70999_length_222_cov_3.106952_g63058_i0reverse_frame_1 - 0.078 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit DUF3040 PF11239.8 NODE_70999_length_222_cov_3.106952_g63058_i0reverse_frame_1 - 0.11 12.8 0.0 0.16 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) Tnp_22_dsRBD PF17490.2 NODE_70997_length_222_cov_3.213904_g63056_i0reverse_frame_1 - 0.2 11.7 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 L1 transposable element dsRBD-like domain 7TM_GPCR_Srbc PF10316.9 NODE_70994_length_222_cov_3.406417_g63053_i0forward_frame_1 - 0.059 12.9 0.5 0.062 12.8 0.5 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srbc Smr PF01713.21 NODE_70992_length_222_cov_3.417112_g63051_i0forward_frame_1 - 1.5e-09 38.1 0.0 1.8e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Smr domain Kinesin PF00225.23 NODE_70991_length_222_cov_3.566845_g63050_i0reverse_frame_1 - 1.2e-15 57.3 0.1 1.2e-15 57.3 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_70991_length_222_cov_3.566845_g63050_i0reverse_frame_1 - 9.2e-05 22.4 0.1 0.00011 22.2 0.1 1.1 1 0 0 1 1 1 1 Microtubule binding 53-BP1_Tudor PF09038.10 NODE_70990_length_222_cov_3.625668_g63049_i0forward_frame_1 - 0.077 13.0 0.0 0.08 12.9 0.0 1.1 1 0 0 1 1 1 0 Tumour suppressor p53-binding protein-1 Tudor Na_sulph_symp PF00939.19 NODE_70979_length_222_cov_6.037433_g63038_i0forward_frame_1 - 0.1 11.6 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Sodium:sulfate symporter transmembrane region Bradykinin PF06753.12 NODE_70970_length_222_cov_29.331551_g63029_i0forward_frame_1 - 7.9 6.3 9.7 5.3 6.9 0.4 2.9 3 0 0 3 3 3 0 Bradykinin LBP_BPI_CETP_C PF02886.17 NODE_70965_length_222_cov_31.192513_g63024_i0forward_frame_1 - 0.043 13.3 1.2 0.049 13.1 1.2 1.0 1 0 0 1 1 1 0 LBP / BPI / CETP family, C-terminal domain NPCC PF08058.11 NODE_70963_length_222_cov_35.315508_g63022_i0forward_frame_1 - 0.73 9.9 2.5 0.87 9.6 2.5 1.1 1 0 0 1 1 1 0 Nuclear pore complex component DUF148 PF02520.17 NODE_70962_length_222_cov_38.716578_g63021_i0reverse_frame_1 - 0.0088 16.1 3.4 0.61 10.2 0.2 2.1 1 1 0 1 1 1 1 Domain of unknown function DUF148 DUF3385 PF11865.8 NODE_70962_length_222_cov_38.716578_g63021_i0reverse_frame_1 - 0.067 13.1 0.2 0.077 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) PAS_7 PF12860.7 NODE_70962_length_222_cov_38.716578_g63021_i0reverse_frame_1 - 0.087 13.0 0.0 0.096 12.9 0.0 1.1 1 0 0 1 1 1 0 PAS fold TrkH PF02386.16 NODE_70961_length_222_cov_39.486631_g63020_i0forward_frame_1 - 0.037 12.5 5.2 0.041 12.3 5.2 1.0 1 0 0 1 1 1 0 Cation transport protein Zn_Tnp_IS1595 PF12760.7 NODE_70957_length_222_cov_41.823529_g63016_i0reverse_frame_1 - 0.21 11.6 6.7 0.43 10.6 6.7 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain DUSP PF06337.12 NODE_70956_length_222_cov_45.219251_g63015_i0reverse_frame_1 - 0.0021 18.7 2.1 0.0022 18.6 1.1 1.5 1 1 1 2 2 2 1 DUSP domain SnoaL PF07366.12 NODE_70953_length_222_cov_46.470588_g63012_i0reverse_frame_1 - 0.087 12.6 0.0 0.097 12.5 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase Skp1 PF01466.19 NODE_70952_length_222_cov_46.502674_g63011_i0reverse_frame_1 - 0.039 14.1 0.0 0.057 13.5 0.0 1.3 1 0 0 1 1 1 0 Skp1 family, dimerisation domain DUF2628 PF10947.8 NODE_70952_length_222_cov_46.502674_g63011_i0forward_frame_1 - 1.1 9.6 6.0 1.3 9.5 6.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) OxoDH_E1alpha_N PF12573.8 NODE_70946_length_222_cov_51.315508_g63005_i0forward_frame_1 - 0.099 12.4 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal Vac_ImportDeg PF09783.9 NODE_70938_length_222_cov_57.491979_g62997_i0forward_frame_1 - 0.14 12.0 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Vacuolar import and degradation protein DUF3339 PF11820.8 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_1 - 0.046 13.9 0.1 0.072 13.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3339) BPD_transp_2 PF02653.16 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_1 - 0.068 12.3 2.0 0.071 12.3 2.0 1.0 1 0 0 1 1 1 0 Branched-chain amino acid transport system / permease component Ribosomal_60s PF00428.19 NODE_70921_length_222_cov_113.379679_g62980_i0forward_frame_1 - 1e-05 26.0 11.6 1e-05 26.0 11.6 1.6 2 0 0 2 2 2 1 60s Acidic ribosomal protein RNA_polI_A34 PF08208.11 NODE_70921_length_222_cov_113.379679_g62980_i0forward_frame_1 - 0.0084 16.2 3.9 0.0084 16.2 3.9 1.1 1 0 0 1 1 1 1 DNA-directed RNA polymerase I subunit RPA34.5 SMC_ScpA PF02616.14 NODE_70920_length_222_cov_114.491979_g62979_i0reverse_frame_1 - 0.11 12.3 2.1 0.13 12.1 2.1 1.0 1 0 0 1 1 1 0 Segregation and condensation protein ScpA FAM176 PF14851.6 NODE_70920_length_222_cov_114.491979_g62979_i0reverse_frame_1 - 0.16 11.6 2.9 0.18 11.5 2.9 1.1 1 0 0 1 1 1 0 FAM176 family DUF4611 PF15387.6 NODE_70920_length_222_cov_114.491979_g62979_i0reverse_frame_1 - 0.76 10.0 7.5 1.1 9.5 7.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) DarA_N PF18788.1 NODE_70918_length_222_cov_118.877005_g62977_i0reverse_frame_1 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Defence against restriction A N-terminal RCC1_2 PF13540.6 NODE_70918_length_222_cov_118.877005_g62977_i0forward_frame_1 - 0.036 13.9 0.1 0.055 13.3 0.1 1.3 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat DNA_pack_N PF02500.15 NODE_70912_length_222_cov_158.534759_g62971_i0forward_frame_1 - 0.042 13.7 0.1 0.043 13.6 0.1 1.0 1 0 0 1 1 1 0 Probable DNA packing protein, N-terminus Toxin_29 PF08116.11 NODE_70912_length_222_cov_158.534759_g62971_i0forward_frame_1 - 0.099 12.7 1.5 0.28 11.2 0.3 2.2 3 0 0 3 3 3 0 PhTx neurotoxin family Glyco_hydro_31 PF01055.26 NODE_70907_length_222_cov_195.604278_g62966_i0reverse_frame_1 - 0.00039 19.7 0.0 0.00045 19.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF4131 PF13567.6 NODE_70898_length_222_cov_1657.278075_g62957_i0forward_frame_1 - 0.15 11.7 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3487 PF11990.8 NODE_70897_length_222_cov_82495.946524_g62956_i0reverse_frame_1 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) V_cholerae_RfbT PF05575.11 NODE_70896_length_223_cov_0.840426_g62955_i0reverse_frame_3 - 0.018 14.4 0.1 0.019 14.3 0.1 1.1 1 0 0 1 1 1 0 Vibrio cholerae RfbT protein DUF5332 PF17266.2 NODE_70893_length_223_cov_0.845745_g62952_i0reverse_frame_3 - 1.1 8.9 9.5 1.2 8.8 9.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5332) RhoGEF67_u1 PF16615.5 NODE_70891_length_223_cov_0.851064_g62950_i0forward_frame_3 - 0.045 14.3 8.2 0.045 14.3 8.2 1.8 2 1 0 2 2 2 0 Unstructured region one on RhoGEF 6 and 7 Rsm1 PF08600.10 NODE_70891_length_223_cov_0.851064_g62950_i0forward_frame_2 - 0.0034 17.5 0.2 0.0038 17.4 0.2 1.2 1 0 0 1 1 1 1 Rsm1-like DUF842 PF05811.13 NODE_70891_length_223_cov_0.851064_g62950_i0forward_frame_2 - 0.28 10.9 3.8 0.6 9.8 3.9 1.5 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) DUF3364 PF11844.8 NODE_70890_length_223_cov_0.851064_g62949_i0reverse_frame_3 - 0.034 14.4 0.2 0.055 13.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) Stm1_N PF09598.10 NODE_70889_length_223_cov_0.851064_g62948_i0reverse_frame_3 - 0.064 14.1 2.3 0.078 13.8 2.3 1.1 1 0 0 1 1 1 0 Stm1 Viral_DNA_bp PF00747.17 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_3 - 0.017 12.3 0.2 0.018 12.3 0.2 1.0 1 0 0 1 1 1 0 ssDNA binding protein Zn_ribbon_17 PF17120.5 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_2 - 0.027 14.1 0.9 0.04 13.6 0.9 1.3 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_2 PF13639.6 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_2 - 0.15 12.4 5.3 0.33 11.3 5.5 1.4 1 1 0 1 1 1 0 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_2 - 0.33 10.8 5.8 5.8 6.9 6.9 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C2H2_4 PF13894.6 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_2 - 2 9.5 8.4 0.3 12.0 3.6 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger VF530 PF09905.9 NODE_70887_length_223_cov_0.851064_g62946_i0reverse_frame_2 - 0.2 11.9 0.0 0.33 11.2 0.0 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 Gemini_AL1_M PF08283.11 NODE_70882_length_223_cov_0.861702_g62941_i0forward_frame_3 - 0.087 12.9 0.3 0.1 12.7 0.3 1.2 1 0 0 1 1 1 0 Geminivirus rep protein central domain PNKP_ligase PF16542.5 NODE_70877_length_223_cov_0.962766_g62936_i0reverse_frame_2 - 0.026 14.0 0.0 0.026 14.0 0.0 1.0 1 0 0 1 1 1 0 PNKP adenylyltransferase domain, ligase domain PPTA PF01239.22 NODE_70870_length_223_cov_1.042553_g62929_i0reverse_frame_3 - 6.9e-13 47.9 10.4 8.2e-07 28.6 0.3 3.0 3 0 0 3 3 3 2 Protein prenyltransferase alpha subunit repeat Retrotran_gag_3 PF14244.6 NODE_70870_length_223_cov_1.042553_g62929_i0reverse_frame_3 - 0.086 12.7 0.2 3.6 7.5 0.1 2.2 2 0 0 2 2 2 0 gag-polypeptide of LTR copia-type DUF4219 PF13961.6 NODE_70870_length_223_cov_1.042553_g62929_i0reverse_frame_3 - 0.86 9.3 4.9 12 5.8 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4219) Ssl1 PF04056.14 NODE_70868_length_223_cov_1.053191_g62927_i0reverse_frame_2 - 4.5e-12 46.2 0.1 5e-12 46.0 0.1 1.0 1 0 0 1 1 1 1 Ssl1-like Peptidase_S30 PF01577.16 NODE_70866_length_223_cov_1.063830_g62925_i0reverse_frame_3 - 0.92 9.1 16.3 0.99 9.0 16.3 1.0 1 0 0 1 1 1 0 Potyvirus P1 protease Calici_PP_N PF08405.11 NODE_70864_length_223_cov_1.079787_g62923_i0forward_frame_3 - 0.025 13.4 0.2 0.027 13.3 0.2 1.0 1 0 0 1 1 1 0 Viral polyprotein N-terminal Cortex-I_coil PF09304.10 NODE_70852_length_223_cov_1.228723_g62911_i0reverse_frame_3 - 0.019 15.2 0.5 0.026 14.7 0.4 1.3 1 1 0 1 1 1 0 Cortexillin I, coiled coil DUF1098 PF06497.11 NODE_70852_length_223_cov_1.228723_g62911_i0reverse_frame_3 - 0.044 14.2 0.4 0.052 14.0 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1098) DUF1125 PF06563.11 NODE_70851_length_223_cov_1.228723_g62910_i0forward_frame_3 - 0.13 12.2 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1125) DUF5324 PF17258.2 NODE_70845_length_223_cov_1.255319_g62904_i0reverse_frame_3 - 0.05 13.3 0.1 0.054 13.2 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5324) Alfin PF12165.8 NODE_70845_length_223_cov_1.255319_g62904_i0reverse_frame_2 - 0.12 12.0 0.0 0.17 11.5 0.0 1.3 1 1 0 1 1 1 0 Alfin DUF359 PF04019.12 NODE_70845_length_223_cov_1.255319_g62904_i0reverse_frame_2 - 0.18 11.4 0.0 0.26 10.9 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF359) RXT2_N PF08595.11 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 1.1 9.2 4.2 1.4 9.0 4.2 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal DUF2457 PF10446.9 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 3.6 6.6 19.3 3.4 6.7 19.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF2076 PF09849.9 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 5.2 7.0 8.6 5.6 6.9 8.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) RNA_pol_3_Rpc31 PF11705.8 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 5.4 7.2 17.8 5.8 7.1 17.8 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 SDA1 PF05285.12 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 6.7 6.0 8.3 7.1 6.0 8.3 1.1 1 0 0 1 1 1 0 SDA1 NOA36 PF06524.12 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 8.1 5.7 17.4 8.3 5.6 17.4 1.1 1 0 0 1 1 1 0 NOA36 protein Nop14 PF04147.12 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 9.4 4.3 7.7 8.9 4.4 7.7 1.0 1 0 0 1 1 1 0 Nop14-like family Rab_eff_C PF04698.12 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_3 - 0.0026 16.2 1.6 0.0027 16.1 1.6 1.0 1 0 0 1 1 1 1 Rab effector MyRIP/melanophilin C-terminus SR-25 PF10500.9 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_3 - 2.6 7.6 12.5 3.3 7.3 12.5 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF1180 PF06679.12 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_2 - 0.054 13.9 0.4 0.065 13.7 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) TMEM154 PF15102.6 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_2 - 0.16 11.8 5.2 0.2 11.6 5.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Sod_Ni PF09055.11 NODE_70836_length_223_cov_1.271277_g62895_i0forward_frame_3 - 0.034 14.7 0.0 0.037 14.6 0.0 1.1 1 0 0 1 1 1 0 Nickel-containing superoxide dismutase LANC_like PF05147.13 NODE_70833_length_223_cov_1.276596_g62892_i0reverse_frame_3 - 0.079 11.5 0.2 0.071 11.7 0.2 1.1 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein SlyX PF04102.12 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.0083 16.7 4.6 0.0094 16.5 4.6 1.1 1 0 0 1 1 1 1 SlyX DUF4404 PF14357.6 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.011 16.4 1.6 0.013 16.2 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) PKcGMP_CC PF16808.5 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.039 13.8 0.7 1 9.2 0.1 2.1 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Spc42p PF11544.8 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.042 13.8 0.0 0.052 13.6 0.0 1.1 1 0 0 1 1 1 0 Spindle pole body component Spc42p LpoB PF13036.6 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.059 13.3 1.0 0.064 13.2 1.0 1.0 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB DUF3138 PF11336.8 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 1.1 7.8 6.1 1.2 7.6 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Imm70 PF15601.6 NODE_70830_length_223_cov_1.276596_g62889_i0forward_frame_2 - 0.061 12.9 0.0 0.075 12.6 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 70 Metallophos PF00149.28 NODE_70828_length_223_cov_1.324468_g62887_i0reverse_frame_2 - 2.2e-05 25.0 0.2 2.6e-05 24.8 0.2 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DAO PF01266.24 NODE_70827_length_223_cov_1.329787_g62886_i0reverse_frame_3 - 0.0057 16.3 2.1 0.0069 16.0 2.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 NODE_70827_length_223_cov_1.329787_g62886_i0reverse_frame_3 - 0.0069 15.6 0.0 0.0072 15.6 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase PRESAN PF09687.10 NODE_70827_length_223_cov_1.329787_g62886_i0forward_frame_2 - 0.017 15.7 0.6 0.021 15.4 0.6 1.2 1 0 0 1 1 1 0 Plasmodium RESA N-terminal SoDot-IcmSS PF16848.5 NODE_70824_length_223_cov_1.377660_g62883_i0reverse_frame_3 - 0.081 12.9 0.4 0.083 12.9 0.4 1.1 1 0 0 1 1 1 0 Substrate of the Dot/Icm secretion system, putative CM_1 PF07736.11 NODE_70823_length_223_cov_1.382979_g62882_i0reverse_frame_3 - 0.00066 20.1 0.2 0.0013 19.1 0.2 1.5 1 1 1 2 2 2 1 Chorismate mutase type I Spc7_C2 PF15577.6 NODE_70822_length_223_cov_1.388298_g62881_i0reverse_frame_2 - 0.16 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Spc7_C2 FAM76 PF16046.5 NODE_70819_length_223_cov_1.409574_g62878_i0forward_frame_2 - 0.04 13.3 0.0 0.046 13.1 0.0 1.0 1 0 0 1 1 1 0 FAM76 protein DUF1759 PF03564.15 NODE_70818_length_223_cov_1.409574_g62877_i0forward_frame_3 - 0.09 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1759) Sialidase PF02973.16 NODE_70812_length_223_cov_1.484043_g62871_i0reverse_frame_2 - 0.12 11.8 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Sialidase, N-terminal domain Mito_carr PF00153.27 NODE_70811_length_223_cov_1.484043_g62870_i0reverse_frame_3 - 1.6e-09 37.6 0.0 2.1e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein Mob1_phocein PF03637.17 NODE_70811_length_223_cov_1.484043_g62870_i0forward_frame_3 - 0.0059 16.6 0.3 0.0063 16.5 0.3 1.1 1 0 0 1 1 1 1 Mob1/phocein family MMR_HSR1_Xtn PF16897.5 NODE_70810_length_223_cov_1.484043_g62869_i0forward_frame_2 - 0.019 14.9 1.3 0.02 14.9 1.3 1.3 1 1 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Orf78 PF06024.12 NODE_70809_length_223_cov_1.489362_g62868_i0reverse_frame_2 - 1 9.7 5.8 0.13 12.5 1.4 1.7 1 1 1 2 2 2 0 Orf78 (ac78) HTH_Tnp_Tc3_1 PF11427.8 NODE_70807_length_223_cov_1.489362_g62866_i0reverse_frame_2 - 0.045 13.6 0.2 0.053 13.4 0.2 1.3 1 1 0 1 1 1 0 Tc3 transposase Chorein_N PF12624.7 NODE_70807_length_223_cov_1.489362_g62866_i0forward_frame_3 - 0.098 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 N-terminal region of Chorein or VPS13 Acyltransferase PF01553.21 NODE_70805_length_223_cov_1.489362_g62864_i0reverse_frame_3 - 0.00066 19.3 0.0 0.0007 19.2 0.0 1.1 1 0 0 1 1 1 1 Acyltransferase DUF4448 PF14610.6 NODE_70803_length_223_cov_1.515957_g62862_i0reverse_frame_2 - 4.1 7.1 5.5 4.8 6.9 5.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) RhodobacterPufX PF11511.8 NODE_70803_length_223_cov_1.515957_g62862_i0reverse_frame_2 - 8.7 6.0 9.4 17 5.1 9.4 1.6 1 1 0 1 1 1 0 Intrinsic membrane protein PufX CPSase_C PF18302.1 NODE_70794_length_223_cov_1.606383_g62853_i0reverse_frame_3 - 1.3 9.7 3.8 3.6 8.3 0.1 2.8 3 0 0 3 3 3 0 Carbamoyl phosphate synthetase C-terminal domain DUF1636 PF07845.11 NODE_70793_length_223_cov_1.611702_g62852_i0reverse_frame_3 - 0.037 14.5 0.1 0.037 14.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) DUF865 PF05906.11 NODE_70792_length_223_cov_1.617021_g62851_i0reverse_frame_2 - 0.055 13.3 2.5 0.1 12.4 2.5 1.5 1 0 0 1 1 1 0 Herpesvirus-7 repeat of unknown function (DUF865) DUF2610 PF11020.8 NODE_70790_length_223_cov_1.632979_g62849_i0reverse_frame_3 - 0.039 13.8 0.1 0.051 13.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks328.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks328.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks328.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks328.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:12:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- rve PF00665.26 NODE_70786_length_223_cov_1.675532_g62845_i0forward_frame_3 - 2.9e-05 24.2 0.0 3e-05 24.2 0.0 1.0 1 0 0 1 1 1 1 Integrase core domain Utp14 PF04615.13 NODE_70784_length_223_cov_1.686170_g62843_i0forward_frame_3 - 7e-16 58.0 4.4 7.9e-16 57.8 4.4 1.0 1 0 0 1 1 1 1 Utp14 protein Snurportin1 PF11538.8 NODE_70784_length_223_cov_1.686170_g62843_i0forward_frame_3 - 0.64 10.3 8.7 1.1 9.5 8.7 1.4 1 0 0 1 1 1 0 Snurportin1 QWRF PF04484.12 NODE_70782_length_223_cov_1.691489_g62841_i0reverse_frame_3 - 7.4 6.2 8.5 7.5 6.2 8.5 1.1 1 0 0 1 1 1 0 QWRF family F_actin_bund_C PF18060.1 NODE_70782_length_223_cov_1.691489_g62841_i0reverse_frame_2 - 0.12 12.5 1.5 0.13 12.4 1.5 1.1 1 0 0 1 1 1 0 F actin bundling C terminal EB PF01683.18 NODE_70782_length_223_cov_1.691489_g62841_i0forward_frame_2 - 1.9 8.9 12.1 41 4.6 12.1 2.6 1 1 0 1 1 1 0 EB module Toxin_35 PF10530.9 NODE_70782_length_223_cov_1.691489_g62841_i0forward_frame_2 - 2.1 8.4 10.2 0.96 9.5 0.5 2.4 1 1 1 2 2 2 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold P22_Cro PF14549.6 NODE_70781_length_223_cov_1.691489_g62840_i0forward_frame_2 - 0.1 12.5 0.0 5.3 7.0 0.0 2.1 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro Thioredoxin_7 PF13899.6 NODE_70778_length_223_cov_1.696809_g62837_i0reverse_frame_2 - 0.21 11.8 0.7 0.37 11.0 0.3 1.6 1 1 1 2 2 2 0 Thioredoxin-like DUF3634 PF12321.8 NODE_70775_length_223_cov_1.702128_g62834_i0reverse_frame_3 - 0.05 14.0 0.9 0.1 13.0 0.7 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3634) Ferlin_C PF16165.5 NODE_70775_length_223_cov_1.702128_g62834_i0forward_frame_3 - 3.3 7.6 5.1 3.7 7.5 5.1 1.1 1 0 0 1 1 1 0 Ferlin C-terminus Ferlin_C PF16165.5 NODE_70774_length_223_cov_1.702128_g62833_i0forward_frame_2 - 7.1 6.6 6.8 8.7 6.3 6.8 1.2 1 0 0 1 1 1 0 Ferlin C-terminus DRIM PF07539.12 NODE_70773_length_223_cov_1.702128_g62832_i0forward_frame_3 - 0.079 11.2 0.0 0.095 11.0 0.0 1.0 1 0 0 1 1 1 0 Down-regulated in metastasis FAM76 PF16046.5 NODE_70771_length_223_cov_1.739362_g62830_i0forward_frame_2 - 0.0037 16.7 2.6 0.0037 16.7 2.6 1.0 1 0 0 1 1 1 1 FAM76 protein DUF4510 PF14971.6 NODE_70771_length_223_cov_1.739362_g62830_i0forward_frame_2 - 0.059 13.7 0.2 0.073 13.4 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4510) GARS_N PF02844.15 NODE_70770_length_223_cov_1.760638_g62829_i0reverse_frame_3 - 0.095 13.5 0.0 0.1 13.4 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, N domain ABC2_membrane_3 PF12698.7 NODE_70769_length_223_cov_1.787234_g62828_i0reverse_frame_3 - 0.11 11.5 13.9 0.12 11.4 13.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Phage_holin_4_1 PF05105.12 NODE_70767_length_223_cov_1.797872_g62826_i0forward_frame_3 - 0.00033 20.8 0.0 0.0004 20.5 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage holin family PI3K_p85B PF02192.16 NODE_70764_length_223_cov_1.824468_g62823_i0forward_frame_3 - 0.15 11.8 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 PI3-kinase family, p85-binding domain RE_SinI PF09570.10 NODE_70763_length_223_cov_1.840426_g62822_i0reverse_frame_3 - 0.013 14.7 0.1 0.015 14.5 0.1 1.0 1 0 0 1 1 1 0 SinI restriction endonuclease Aminotran_1_2 PF00155.21 NODE_70762_length_223_cov_1.845745_g62821_i0forward_frame_2 - 0.026 13.7 0.0 0.026 13.7 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II PH_12 PF16457.5 NODE_70761_length_223_cov_1.851064_g62820_i0forward_frame_3 - 0.01 16.4 0.2 0.011 16.2 0.2 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain DUF4346 PF14251.6 NODE_70761_length_223_cov_1.851064_g62820_i0forward_frame_3 - 0.066 13.3 0.2 0.091 12.8 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4346) UPF0139 PF03669.13 NODE_70753_length_223_cov_2.010638_g62812_i0reverse_frame_2 - 0.059 13.2 0.1 0.072 13.0 0.1 1.3 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0139) IQ PF00612.27 NODE_70752_length_223_cov_2.015957_g62811_i0forward_frame_3 - 0.00035 20.1 0.2 0.00035 20.1 0.2 1.6 2 0 0 2 2 2 1 IQ calmodulin-binding motif DUF5411 PF17424.2 NODE_70752_length_223_cov_2.015957_g62811_i0forward_frame_2 - 0.024 14.6 0.1 0.026 14.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5411) ydhR PF08803.11 NODE_70750_length_223_cov_2.021277_g62809_i0reverse_frame_3 - 0.057 13.3 0.1 0.063 13.2 0.1 1.1 1 0 0 1 1 1 0 Putative mono-oxygenase ydhR DUF202 PF02656.15 NODE_70749_length_223_cov_2.031915_g62808_i0forward_frame_3 - 0.022 15.2 1.5 0.038 14.4 0.3 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF202) COX4 PF02936.14 NODE_70749_length_223_cov_2.031915_g62808_i0forward_frame_3 - 0.15 12.1 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV Pex24p PF06398.11 NODE_70748_length_223_cov_2.042553_g62807_i0reverse_frame_2 - 0.01 14.8 2.8 0.011 14.7 2.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin GAPES4 PF17157.4 NODE_70747_length_223_cov_2.053191_g62806_i0reverse_frame_2 - 0.021 15.2 0.1 0.025 15.0 0.1 1.2 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain DUF3262 PF11660.8 NODE_70742_length_223_cov_2.106383_g62801_i0reverse_frame_3 - 0.044 14.2 1.1 0.052 13.9 1.1 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3262) Otopetrin PF03189.13 NODE_70742_length_223_cov_2.106383_g62801_i0reverse_frame_3 - 0.22 10.3 3.0 0.22 10.3 3.0 1.0 1 0 0 1 1 1 0 Otopetrin Baculo_p24 PF05073.12 NODE_70742_length_223_cov_2.106383_g62801_i0reverse_frame_2 - 0.11 12.2 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein DLIC PF05783.11 NODE_70740_length_223_cov_2.148936_g62799_i0forward_frame_3 - 0.36 9.6 0.3 0.43 9.4 0.3 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) Aa_trans PF01490.18 NODE_70738_length_223_cov_2.186170_g62797_i0forward_frame_3 - 0.00011 21.1 1.4 0.00011 21.1 1.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Lamprin PF06403.11 NODE_70737_length_223_cov_2.212766_g62796_i0forward_frame_3 - 0.015 15.2 0.7 0.019 14.9 0.7 1.2 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_70737_length_223_cov_2.212766_g62796_i0forward_frame_2 - 0.00052 20.0 8.4 0.00061 19.8 8.4 1.2 1 0 0 1 1 1 1 Lamprin DUF553 PF04473.12 NODE_70728_length_223_cov_2.388298_g62787_i0forward_frame_2 - 0.083 12.4 0.1 0.098 12.2 0.1 1.2 1 0 0 1 1 1 0 Transglutaminase-like domain IMUP PF15761.5 NODE_70724_length_223_cov_2.500000_g62783_i0reverse_frame_3 - 0.026 15.2 4.1 0.029 15.1 4.1 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_70724_length_223_cov_2.500000_g62783_i0reverse_frame_3 - 0.034 13.7 5.3 0.035 13.7 5.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF5101 PF17031.5 NODE_70723_length_223_cov_2.510638_g62782_i0forward_frame_2 - 0.065 13.3 0.1 0.074 13.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) DIOX_N PF14226.6 NODE_70722_length_223_cov_2.537234_g62781_i0reverse_frame_3 - 0.074 13.8 0.0 0.088 13.6 0.0 1.1 1 0 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal HK97-gp10_like PF04883.12 NODE_70722_length_223_cov_2.537234_g62781_i0reverse_frame_2 - 0.099 13.6 0.1 0.12 13.4 0.1 1.2 1 0 0 1 1 1 0 Bacteriophage HK97-gp10, putative tail-component Torus PF16131.5 NODE_70722_length_223_cov_2.537234_g62781_i0forward_frame_3 - 0.22 12.2 0.3 0.26 12.0 0.3 1.1 1 0 0 1 1 1 0 Torus domain DUF624 PF04854.14 NODE_70717_length_223_cov_2.611702_g62776_i0forward_frame_2 - 0.009 16.1 1.0 0.014 15.5 1.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF624 Lipoprotein_18 PF06804.11 NODE_70709_length_223_cov_2.792553_g62768_i0reverse_frame_2 - 0.0001 21.5 0.0 0.00012 21.2 0.0 1.1 1 0 0 1 1 1 1 NlpB/DapX lipoprotein PLAC8 PF04749.17 NODE_70707_length_223_cov_2.877660_g62766_i0forward_frame_3 - 0.036 15.1 0.8 0.037 15.0 0.8 1.1 1 0 0 1 1 1 0 PLAC8 family FLILHELTA PF10306.9 NODE_70704_length_223_cov_3.074468_g62763_i0forward_frame_3 - 0.036 14.5 0.1 0.041 14.3 0.1 1.1 1 0 0 1 1 1 0 Hypothetical protein FLILHELTA TMEM154 PF15102.6 NODE_70702_length_223_cov_3.191489_g62761_i0forward_frame_3 - 0.034 14.1 2.1 0.041 13.8 2.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF5383 PF17355.2 NODE_70702_length_223_cov_3.191489_g62761_i0forward_frame_3 - 0.09 13.2 0.3 0.11 12.9 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Fer4_8 PF13183.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 1.1e-06 29.0 0.8 1.4e-06 28.6 0.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 6e-06 26.3 0.3 7.9e-06 25.9 0.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 2.8e-05 23.7 2.0 4e-05 23.2 2.0 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 2.9e-05 23.9 2.7 4.5e-05 23.3 2.7 1.3 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_7 PF12838.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.00021 21.8 0.2 0.00022 21.8 0.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.00027 21.2 2.2 0.00039 20.7 2.2 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_9 PF13187.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.00028 21.0 0.1 0.00032 20.8 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.00032 20.6 2.9 0.00047 20.1 2.9 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_17 PF13534.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.0018 18.8 1.8 0.0024 18.4 1.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.0061 17.5 0.1 0.0062 17.4 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.019 15.0 0.8 0.027 14.6 0.8 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.051 14.5 4.2 0.077 14.0 4.2 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_13 PF13370.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.094 13.3 3.8 0.15 12.6 3.9 1.3 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I PAPS_reduct PF01507.19 NODE_70699_length_223_cov_3.601064_g62758_i0reverse_frame_2 - 2.7e-22 79.6 0.0 2.9e-22 79.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family LisH PF08513.11 NODE_70699_length_223_cov_3.601064_g62758_i0reverse_frame_2 - 0.024 14.6 0.3 0.046 13.7 0.3 1.5 1 0 0 1 1 1 0 LisH partial_CstF PF15861.5 NODE_70696_length_223_cov_3.962766_g62755_i0reverse_frame_2 - 0.28 11.0 0.2 0.37 10.6 0.2 1.2 1 0 0 1 1 1 0 Partial cleavage stimulation factor domain AGA2 PF17366.2 NODE_70694_length_223_cov_4.734043_g62753_i0reverse_frame_2 - 0.12 12.1 0.3 0.22 11.2 0.3 1.4 1 0 0 1 1 1 0 A-agglutinin-binding subunit Aga2 AMP-binding PF00501.28 NODE_70693_length_223_cov_4.845745_g62752_i0forward_frame_3 - 0.0026 16.4 0.0 0.0029 16.3 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme PDDEXK_5 PF11645.8 NODE_70690_length_223_cov_9.648936_g62749_i0forward_frame_3 - 0.055 13.4 0.2 0.07 13.1 0.2 1.2 1 0 0 1 1 1 0 PD-(D/E)XK endonuclease IL2 PF00715.17 NODE_70684_length_223_cov_30.414894_g62743_i0reverse_frame_3 - 0.05 13.6 0.6 0.055 13.4 0.6 1.1 1 0 0 1 1 1 0 Interleukin 2 APC_N_CC PF16689.5 NODE_70684_length_223_cov_30.414894_g62743_i0reverse_frame_3 - 0.3 11.2 3.2 0.63 10.1 3.2 1.5 1 1 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain GCR1_C PF12550.8 NODE_70683_length_223_cov_32.606383_g62742_i0forward_frame_3 - 0.32 11.3 8.0 0.4 11.0 8.0 1.2 1 0 0 1 1 1 0 Transcriptional activator of glycolytic enzymes DUF4304 PF14137.6 NODE_70681_length_223_cov_33.569149_g62740_i0reverse_frame_3 - 0.12 12.6 0.3 0.15 12.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4304) SARS_X4 PF08779.10 NODE_70680_length_223_cov_33.877660_g62739_i0reverse_frame_3 - 0.11 12.7 0.1 0.14 12.4 0.1 1.4 1 0 0 1 1 1 0 SARS coronavirus X4 like DUF621 PF04789.15 NODE_70675_length_223_cov_36.712766_g62734_i0forward_frame_3 - 0.51 9.5 8.1 0.51 9.4 8.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF621) ASXH PF13919.6 NODE_70671_length_223_cov_42.223404_g62730_i0forward_frame_3 - 0.036 14.1 0.0 0.043 13.8 0.0 1.0 1 0 0 1 1 1 0 Asx homology domain Raptor_N PF14538.6 NODE_70670_length_223_cov_44.824468_g62729_i0reverse_frame_2 - 0.033 14.1 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Raptor N-terminal CASPase like domain CHAT PF12770.7 NODE_70670_length_223_cov_44.824468_g62729_i0reverse_frame_2 - 0.073 12.5 0.0 0.073 12.5 0.0 1.0 1 0 0 1 1 1 0 CHAT domain DUF4051 PF13260.6 NODE_70665_length_223_cov_49.191489_g62724_i0forward_frame_2 - 3.1 7.6 7.0 7.8 6.3 7.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) DUF2207 PF09972.9 NODE_70665_length_223_cov_49.191489_g62724_i0forward_frame_2 - 6.6 5.4 6.8 6.5 5.4 6.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) RPA_interact_N PF14766.6 NODE_70661_length_223_cov_51.765957_g62720_i0reverse_frame_2 - 0.092 12.4 0.6 0.16 11.6 0.6 1.4 1 0 0 1 1 1 0 Replication protein A interacting N-terminal FSH1 PF03959.13 NODE_70661_length_223_cov_51.765957_g62720_i0forward_frame_2 - 0.052 13.2 0.0 0.057 13.1 0.0 1.0 1 0 0 1 1 1 0 Serine hydrolase (FSH1) DUF4219 PF13961.6 NODE_70653_length_223_cov_61.590426_g62712_i0forward_frame_3 - 0.075 12.7 1.3 1.7 8.4 1.3 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4219) Transposase_28 PF04195.12 NODE_70652_length_223_cov_61.686170_g62711_i0reverse_frame_2 - 0.028 14.7 0.1 0.034 14.4 0.1 1.1 1 0 0 1 1 1 0 Putative gypsy type transposon RNA_pol_Rbc25 PF08292.12 NODE_70649_length_223_cov_67.946809_g62708_i0forward_frame_2 - 0.21 11.8 1.1 0.22 11.7 1.1 1.1 1 0 0 1 1 1 0 RNA polymerase III subunit Rpc25 DUF1856 PF08983.10 NODE_70645_length_223_cov_71.500000_g62704_i0forward_frame_3 - 0.073 13.3 0.5 0.11 12.7 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1856) TGT_C2 PF14810.6 NODE_70642_length_223_cov_87.404255_g62701_i0forward_frame_2 - 0.015 15.4 0.0 3.4 7.9 0.0 2.1 1 1 1 2 2 2 0 Patch-forming domain C2 of tRNA-guanine transglycosylase Peptidase_M60_C PF18630.1 NODE_70642_length_223_cov_87.404255_g62701_i0forward_frame_2 - 0.11 12.7 0.7 2.2 8.5 0.1 2.1 2 0 0 2 2 2 0 Peptidase M60 C-terminal domain PIG-H PF10181.9 NODE_70641_length_223_cov_90.356383_g62700_i0forward_frame_3 - 0.036 13.9 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 GPI-GlcNAc transferase complex, PIG-H component S_100 PF01023.19 NODE_70634_length_223_cov_106.303191_g62693_i0reverse_frame_2 - 0.16 11.7 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain DUF4769 PF15992.5 NODE_70631_length_223_cov_125.946809_g62690_i0reverse_frame_2 - 0.028 14.2 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) Ldr_toxin PF13940.6 NODE_70626_length_223_cov_167.106383_g62685_i0reverse_frame_3 - 0.031 14.3 0.1 0.04 14.0 0.1 1.2 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system Choline_kinase PF01633.20 NODE_70625_length_223_cov_167.686170_g62684_i0reverse_frame_3 - 0.12 12.0 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase DUF1072 PF06380.11 NODE_70623_length_223_cov_175.154255_g62682_i0forward_frame_3 - 0.024 14.5 0.2 0.21 11.5 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) DUF5357 PF17310.2 NODE_70616_length_224_cov_0.841270_g62675_i0reverse_frame_3 - 0.03 12.9 0.0 0.036 12.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) DUF3334 PF11813.8 NODE_70612_length_224_cov_0.846561_g62671_i0reverse_frame_2 - 0.098 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3334) NPDC1 PF06809.11 NODE_70608_length_224_cov_0.846561_g62667_i0reverse_frame_2 - 0.11 11.6 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Neural proliferation differentiation control-1 protein (NPDC1) YacG PF03884.14 NODE_70606_length_224_cov_0.904762_g62665_i0reverse_frame_3 - 0.025 14.3 1.0 0.039 13.7 1.0 1.3 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG Lamprin PF06403.11 NODE_70605_length_224_cov_0.920635_g62664_i0forward_frame_3 - 3.2 7.7 19.6 1.4 8.9 6.4 2.1 1 1 1 2 2 2 0 Lamprin DUF3331 PF11811.8 NODE_70603_length_224_cov_0.957672_g62662_i0reverse_frame_3 - 0.052 13.4 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) Las1 PF04031.13 NODE_70598_length_224_cov_1.031746_g62657_i0forward_frame_3 - 0.07 13.2 0.2 0.076 13.1 0.2 1.1 1 0 0 1 1 1 0 Las1-like MFS_1 PF07690.16 NODE_70597_length_224_cov_1.042328_g62656_i0reverse_frame_2 - 1.9e-07 30.4 0.4 2e-07 30.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PriA_C PF18074.1 NODE_70597_length_224_cov_1.042328_g62656_i0forward_frame_3 - 0.028 15.2 0.0 0.03 15.1 0.0 1.2 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain Toxin_22 PF08092.11 NODE_70596_length_224_cov_1.042328_g62655_i0forward_frame_3 - 0.022 14.8 3.9 0.027 14.5 0.4 2.1 2 0 0 2 2 2 0 Magi peptide toxin family 7TMR-DISM_7TM PF07695.11 NODE_70591_length_224_cov_1.058201_g62650_i0forward_frame_3 - 0.021 14.7 0.6 0.024 14.5 0.6 1.0 1 0 0 1 1 1 0 7TM diverse intracellular signalling HEPN_AbiU2 PF18734.1 NODE_70591_length_224_cov_1.058201_g62650_i0forward_frame_3 - 0.073 12.6 0.1 0.11 12.0 0.1 1.3 1 1 0 1 1 1 0 AbiU2 DUF5488 PF17590.2 NODE_70590_length_224_cov_1.058201_g62649_i0forward_frame_2 - 0.12 12.1 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5488) Adeno_IVa2 PF02456.15 NODE_70588_length_224_cov_1.100529_g62647_i0forward_frame_3 - 0.0056 15.5 0.0 0.0068 15.3 0.0 1.0 1 0 0 1 1 1 1 Adenovirus IVa2 protein DUF5524 PF17662.1 NODE_70588_length_224_cov_1.100529_g62647_i0forward_frame_3 - 0.13 11.6 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5524) DASH_Spc19 PF08287.11 NODE_70585_length_224_cov_1.111111_g62644_i0reverse_frame_3 - 0.026 14.4 0.1 0.034 14.1 0.1 1.1 1 0 0 1 1 1 0 Spc19 DUF1156 PF06634.12 NODE_70585_length_224_cov_1.111111_g62644_i0forward_frame_2 - 0.16 12.1 2.7 0.19 11.8 2.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1156) TOPRIM_C PF16898.5 NODE_70582_length_224_cov_1.121693_g62641_i0forward_frame_3 - 0.03 14.6 0.2 0.036 14.4 0.2 1.0 1 0 0 1 1 1 0 C-terminal associated domain of TOPRIM RIX1 PF08167.12 NODE_70577_length_224_cov_1.222222_g62636_i0forward_frame_2 - 0.014 15.2 0.2 0.016 14.9 0.2 1.0 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis Hist_deacetyl PF00850.19 NODE_70574_length_224_cov_1.259259_g62633_i0reverse_frame_2 - 2.2e-18 66.8 0.0 2.4e-18 66.7 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain RIX1 PF08167.12 NODE_70574_length_224_cov_1.259259_g62633_i0forward_frame_2 - 0.11 12.2 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis PEPCK_GTP PF00821.18 NODE_70573_length_224_cov_1.259259_g62632_i0reverse_frame_3 - 0.2 10.4 0.0 0.2 10.4 0.0 1.0 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Spin-Ssty PF02513.17 NODE_70570_length_224_cov_1.259259_g62629_i0forward_frame_3 - 0.15 11.8 0.0 8.8 6.1 0.0 2.1 2 0 0 2 2 2 0 Spin/Ssty Family Phage_spike_2 PF18781.1 NODE_70570_length_224_cov_1.259259_g62629_i0forward_frame_3 - 0.16 12.0 0.0 8.3 6.5 0.0 2.0 2 0 0 2 2 2 0 Phage spike trimer DMA PF03474.14 NODE_70568_length_224_cov_1.259259_g62627_i0reverse_frame_2 - 0.16 11.6 0.4 0.37 10.4 0.4 1.6 1 0 0 1 1 1 0 DMRTA motif ZZ PF00569.17 NODE_70568_length_224_cov_1.259259_g62627_i0forward_frame_3 - 0.014 15.2 1.2 0.023 14.5 1.2 1.4 1 0 0 1 1 1 0 Zinc finger, ZZ type Croc_4 PF17691.1 NODE_70567_length_224_cov_1.264550_g62626_i0reverse_frame_3 - 0.029 14.4 3.4 0.13 12.4 0.2 2.0 1 1 1 2 2 2 0 Contingent replication of cDNA 4 DUF3847 PF12958.7 NODE_70564_length_224_cov_1.264550_g62623_i0forward_frame_2 - 0.0071 16.4 0.0 0.0081 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3847) Pkinase PF00069.25 NODE_70556_length_224_cov_1.275132_g62615_i0reverse_frame_3 - 1.4e-05 24.6 0.0 1.9e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain UPF0054 PF02130.17 NODE_70552_length_224_cov_1.343915_g62611_i0forward_frame_2 - 0.068 13.0 0.0 0.094 12.5 0.0 1.3 1 1 0 1 1 1 0 Uncharacterized protein family UPF0054 Polo_box_3 PF18544.1 NODE_70551_length_224_cov_1.365079_g62610_i0forward_frame_3 - 6.4e-05 23.5 0.1 7.4e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 Polo box domain POLO_box PF00659.18 NODE_70551_length_224_cov_1.365079_g62610_i0forward_frame_3 - 0.11 12.7 1.8 1.9 8.7 0.2 2.4 1 1 2 3 3 3 0 POLO box duplicated region Ac110_PIF PF07280.11 NODE_70549_length_224_cov_1.370370_g62608_i0forward_frame_3 - 0.037 13.8 0.0 0.059 13.2 0.0 1.3 1 0 0 1 1 1 0 Per os infectivity factor AC110 Calici_coat PF00915.20 NODE_70547_length_224_cov_1.375661_g62606_i0forward_frame_3 - 0.065 12.1 0.0 0.065 12.1 0.0 1.0 1 0 0 1 1 1 0 Calicivirus coat protein PapG_C PF03628.13 NODE_70546_length_224_cov_1.386243_g62605_i0reverse_frame_2 - 0.0079 16.1 0.0 0.0084 16.0 0.0 1.1 1 0 0 1 1 1 1 PapG chaperone-binding domain SCPU PF05229.15 NODE_70546_length_224_cov_1.386243_g62605_i0forward_frame_2 - 0.073 13.5 0.6 0.079 13.4 0.6 1.1 1 0 0 1 1 1 0 Spore Coat Protein U domain DER1 PF04511.15 NODE_70544_length_224_cov_1.391534_g62603_i0reverse_frame_3 - 1.9e-13 50.8 1.4 2e-13 50.7 1.4 1.0 1 0 0 1 1 1 1 Der1-like family Rhomboid PF01694.22 NODE_70544_length_224_cov_1.391534_g62603_i0reverse_frame_3 - 0.006 16.6 0.2 0.0096 15.9 0.2 1.3 1 0 0 1 1 1 1 Rhomboid family DUF3767 PF12597.8 NODE_70544_length_224_cov_1.391534_g62603_i0forward_frame_3 - 0.059 13.2 0.1 0.078 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) Pox_E6 PF04656.12 NODE_70543_length_224_cov_1.407407_g62602_i0forward_frame_3 - 0.25 9.7 0.0 0.28 9.6 0.0 1.0 1 0 0 1 1 1 0 Pox virus E6 protein rve PF00665.26 NODE_70542_length_224_cov_1.407407_g62601_i0reverse_frame_2 - 0.0014 18.8 0.1 0.002 18.3 0.1 1.3 1 1 0 1 1 1 1 Integrase core domain RHH_6 PF16762.5 NODE_70542_length_224_cov_1.407407_g62601_i0reverse_frame_2 - 0.054 14.1 0.0 0.068 13.8 0.0 1.2 1 0 0 1 1 1 0 Ribbon-helix-helix domain AAA_lid_3 PF17862.1 NODE_70539_length_224_cov_1.444444_g62598_i0reverse_frame_2 - 0.0047 16.7 0.5 0.03 14.1 0.0 2.0 2 0 0 2 2 2 1 AAA+ lid domain GATase_5 PF13507.6 NODE_70538_length_224_cov_1.460317_g62597_i0reverse_frame_2 - 0.092 11.8 0.1 0.097 11.8 0.1 1.1 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DUF5408 PF17402.2 NODE_70537_length_224_cov_1.460317_g62596_i0forward_frame_3 - 0.021 14.7 1.5 0.023 14.6 1.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5408) DUF4022 PF13214.6 NODE_70537_length_224_cov_1.460317_g62596_i0forward_frame_2 - 0.04 14.2 1.1 0.045 14.0 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4022) Castor1_N PF18700.1 NODE_70530_length_224_cov_1.550265_g62589_i0forward_frame_3 - 0.048 13.5 0.0 0.065 13.1 0.0 1.2 1 0 0 1 1 1 0 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Ndc1_Nup PF09531.10 NODE_70528_length_224_cov_1.555556_g62587_i0forward_frame_2 - 4 6.0 9.0 4.1 6.0 9.0 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Glyco_hydro_62 PF03664.13 NODE_70521_length_224_cov_1.608466_g62580_i0reverse_frame_2 - 0.0015 17.9 0.0 0.0017 17.7 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 62 ECR1_N PF14382.6 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_2 - 0.014 15.2 0.1 0.043 13.6 0.1 1.8 1 1 1 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region DUF2630 PF10944.8 NODE_70511_length_224_cov_1.682540_g62570_i0reverse_frame_2 - 2.3 8.7 12.7 0.53 10.8 1.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2630) MFS_1 PF07690.16 NODE_70509_length_224_cov_1.693122_g62568_i0reverse_frame_3 - 0.005 15.8 2.9 0.0057 15.6 2.9 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily COX5B PF01215.19 NODE_70508_length_224_cov_1.724868_g62567_i0forward_frame_3 - 0.012 15.3 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb CHDNT PF08073.12 NODE_70507_length_224_cov_1.735450_g62566_i0forward_frame_3 - 0.0053 16.7 0.1 0.0086 16.0 0.1 1.3 1 0 0 1 1 1 1 CHDNT (NUC034) domain Antimicrobial_6 PF08036.11 NODE_70505_length_224_cov_1.783069_g62564_i0forward_frame_2 - 0.053 13.6 1.4 0.1 12.7 1.4 1.5 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide Helicase_C_2 PF13307.6 NODE_70501_length_224_cov_1.820106_g62560_i0reverse_frame_2 - 6.6e-21 75.2 0.3 6.8e-21 75.2 0.3 1.0 1 0 0 1 1 1 1 Helicase C-terminal domain MutL PF13941.6 NODE_70501_length_224_cov_1.820106_g62560_i0reverse_frame_2 - 0.043 12.4 0.0 0.05 12.2 0.0 1.0 1 0 0 1 1 1 0 MutL protein FAM27 PF15832.5 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 0.008 16.7 3.5 0.0097 16.4 3.5 1.2 1 0 0 1 1 1 1 FAM27 D and E protein family Auts2 PF15336.6 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 0.16 12.0 7.0 0.21 11.7 7.0 1.1 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein DUF3915 PF13054.6 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 0.19 11.7 9.5 0.26 11.3 9.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 0.27 9.5 13.5 0.33 9.2 13.5 1.1 1 0 0 1 1 1 0 Atrophin-1 family Phage_Gp23 PF10669.9 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 2 8.7 6.8 2.2 8.6 6.8 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) DUF3915 PF13054.6 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_2 - 0.0067 16.4 4.0 0.0087 16.0 4.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_2 - 0.71 8.1 12.8 0.9 7.8 12.8 1.1 1 0 0 1 1 1 0 Atrophin-1 family FAM27 PF15832.5 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_2 - 1.4 9.5 12.4 7.5 7.2 12.4 1.9 1 1 0 1 1 1 0 FAM27 D and E protein family CopC PF04234.12 NODE_70490_length_224_cov_1.978836_g62549_i0reverse_frame_2 - 3.2e-12 47.3 0.2 3.9e-12 47.0 0.2 1.1 1 0 0 1 1 1 1 CopC domain FlgD_ig PF13860.6 NODE_70490_length_224_cov_1.978836_g62549_i0reverse_frame_2 - 0.12 12.2 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 FlgD Ig-like domain Kazal_2 PF07648.15 NODE_70486_length_224_cov_2.037037_g62545_i0forward_frame_2 - 0.0072 16.4 1.0 0.011 15.8 1.0 1.4 1 0 0 1 1 1 1 Kazal-type serine protease inhibitor domain SBP_bac_5 PF00496.22 NODE_70483_length_224_cov_2.063492_g62542_i0forward_frame_2 - 9.9e-13 47.8 0.1 1.2e-12 47.5 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Tme5_EGF_like PF09064.10 NODE_70481_length_224_cov_2.137566_g62540_i0forward_frame_2 - 0.061 13.2 0.6 0.09 12.7 0.6 1.2 1 0 0 1 1 1 0 Thrombomodulin like fifth domain, EGF-like Fib_alpha PF08702.10 NODE_70480_length_224_cov_2.164021_g62539_i0reverse_frame_3 - 0.016 15.4 5.5 0.028 14.6 5.5 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Sec8_exocyst PF04048.14 NODE_70480_length_224_cov_2.164021_g62539_i0reverse_frame_3 - 0.037 13.9 1.3 0.047 13.6 1.3 1.1 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain TMPIT PF07851.13 NODE_70480_length_224_cov_2.164021_g62539_i0reverse_frame_3 - 0.071 12.3 1.8 0.076 12.2 1.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF2370 PF10176.9 NODE_70480_length_224_cov_2.164021_g62539_i0forward_frame_2 - 1.7 8.2 3.3 1.9 8.1 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) DUF1270 PF06900.11 NODE_70476_length_224_cov_2.248677_g62535_i0reverse_frame_2 - 0.019 15.3 0.3 0.025 14.9 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1270) DUF4400 PF14348.6 NODE_70475_length_224_cov_2.264550_g62534_i0forward_frame_2 - 2.1 7.8 4.8 2.4 7.6 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) cNMP_binding PF00027.29 NODE_70472_length_224_cov_2.306878_g62531_i0forward_frame_3 - 4.8e-13 49.0 0.0 5.4e-13 48.8 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Lamprin PF06403.11 NODE_70471_length_224_cov_2.317460_g62530_i0forward_frame_3 - 0.16 11.9 2.7 0.16 11.9 2.7 1.1 1 0 0 1 1 1 0 Lamprin TraG_N PF07916.11 NODE_70466_length_224_cov_2.370370_g62525_i0reverse_frame_3 - 0.0076 15.1 7.4 0.009 14.9 7.4 1.0 1 0 0 1 1 1 1 TraG-like protein, N-terminal region GerPB PF10803.8 NODE_70466_length_224_cov_2.370370_g62525_i0forward_frame_3 - 0.094 12.8 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Spore germination GerPB FH2 PF02181.23 NODE_70466_length_224_cov_2.370370_g62525_i0forward_frame_2 - 0.0006 19.0 2.5 0.00062 19.0 2.5 1.0 1 0 0 1 1 1 1 Formin Homology 2 Domain MRP-L51 PF10244.9 NODE_70466_length_224_cov_2.370370_g62525_i0forward_frame_2 - 0.059 13.6 0.9 0.077 13.2 0.9 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit STAT_int PF02865.17 NODE_70464_length_224_cov_2.375661_g62523_i0reverse_frame_3 - 0.0062 17.0 0.0 0.0076 16.7 0.0 1.1 1 0 0 1 1 1 1 STAT protein, protein interaction domain PRTP PF01366.18 NODE_70464_length_224_cov_2.375661_g62523_i0reverse_frame_3 - 0.025 12.7 0.2 0.027 12.5 0.2 1.0 1 0 0 1 1 1 0 Herpesvirus processing and transport protein HS1_rep PF02218.15 NODE_70463_length_224_cov_2.386243_g62522_i0forward_frame_2 - 0.14 12.5 1.1 0.8 10.1 2.1 1.8 2 1 0 2 2 2 0 Repeat in HS1/Cortactin LpoB PF13036.6 NODE_70461_length_224_cov_2.444444_g62520_i0reverse_frame_2 - 0.11 12.4 0.3 0.13 12.2 0.3 1.0 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB ComS PF17584.2 NODE_70455_length_224_cov_2.576720_g62514_i0forward_frame_3 - 0.1 12.1 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacillus competence protein S DUF2079 PF09852.9 NODE_70454_length_224_cov_2.597884_g62513_i0forward_frame_3 - 0.026 13.4 1.6 0.029 13.2 1.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) MatE PF01554.18 NODE_70454_length_224_cov_2.597884_g62513_i0forward_frame_3 - 0.12 12.0 3.2 0.14 11.8 3.2 1.0 1 0 0 1 1 1 0 MatE NdhS PF11623.8 NODE_70451_length_224_cov_2.740741_g62510_i0reverse_frame_2 - 0.028 14.1 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S DUF5090 PF17009.5 NODE_70450_length_224_cov_2.740741_g62509_i0reverse_frame_3 - 1.4 8.8 5.9 1.4 8.8 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Receptor_2B4 PF11465.8 NODE_70449_length_224_cov_2.746032_g62508_i0reverse_frame_2 - 0.054 13.7 0.0 0.06 13.6 0.0 1.1 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks329.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks329.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks329.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks329.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:09:21 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MMS19_C PF12460.8 ORF83646 - 6.6e-05 22.2 0.0 0.00033 19.9 0.0 2.0 1 1 0 1 1 1 1 RNAPII transcription regulator C-terminal RTP1_C1 PF10363.9 ORF83646 - 0.067 13.4 0.0 12 6.1 0.0 2.5 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 3HBOH PF10605.9 ORF83646 - 0.075 11.3 0.5 0.1 10.8 0.5 1.1 1 0 0 1 1 1 0 3HB-oligomer hydrolase (3HBOH) ARL2_Bind_BART PF11527.8 ORF69923 - 2.5e-09 37.2 0.5 2.5e-09 37.2 0.5 2.1 3 0 0 3 3 3 1 The ARF-like 2 binding protein BART UIM PF02809.20 ORF69923 - 0.00087 19.1 18.4 0.029 14.3 2.4 3.5 3 0 0 3 3 3 2 Ubiquitin interaction motif DUF5362 PF17319.2 ORF69923 - 0.043 13.7 0.4 0.34 10.8 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5362) DDE_Tnp_1_assoc PF13808.6 ORF65156 - 4.8e-33 113.0 0.0 1e-32 112.0 0.0 1.6 1 0 0 1 1 1 1 DDE_Tnp_1-associated DDE_Tnp_1 PF01609.21 ORF65156 - 4.5e-29 101.6 0.9 4.8e-29 101.5 0.3 1.4 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_4 PF13701.6 ORF65156 - 0.0025 16.2 0.0 0.97 7.6 0.0 2.3 2 0 0 2 2 2 2 Transposase DDE domain group 1 PKD_channel PF08016.12 ORF61019 - 1.8e-10 40.1 19.0 1.8e-10 40.1 18.3 1.4 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF61019 - 1.2e-07 31.3 25.8 3e-07 29.9 25.9 1.6 1 1 0 1 1 1 1 Ion transport protein Golgin_A5 PF09787.9 ORF57249 - 0.11 11.9 18.4 0.17 11.4 18.4 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF812 PF05667.11 ORF57249 - 0.37 9.6 21.0 0.51 9.2 21.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Filament PF00038.21 ORF57249 - 0.37 10.3 21.5 0.19 11.3 19.4 1.6 1 1 0 1 1 1 0 Intermediate filament protein ADIP PF11559.8 ORF57249 - 0.58 10.2 27.4 0.082 13.0 22.7 2.0 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding SlyX PF04102.12 ORF57249 - 0.77 10.4 9.8 1.3 9.7 0.8 2.9 1 1 2 3 3 3 0 SlyX LPP PF04728.13 ORF57249 - 0.78 10.2 8.2 3.7 8.0 1.7 2.8 2 0 0 2 2 2 0 Lipoprotein leucine-zipper DUF4795 PF16043.5 ORF57249 - 0.83 9.2 23.6 0.11 12.0 7.5 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Jnk-SapK_ap_N PF09744.9 ORF57249 - 1.6 8.9 20.8 0.65 10.2 17.9 1.7 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Atg14 PF10186.9 ORF57249 - 1.9 7.5 25.1 6.2 5.8 25.1 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CC2-LZ PF16516.5 ORF57249 - 2.2 8.7 22.9 2.2 8.7 10.8 3.2 2 1 2 4 4 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF3450 PF11932.8 ORF57249 - 4 6.7 19.1 2.4 7.4 14.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) SseC PF04888.12 ORF57249 - 6.2 6.3 11.4 3.9 7.0 9.6 1.6 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family HIP1_clath_bdg PF16515.5 ORF57249 - 6.2 7.5 17.6 6.4 7.5 12.7 2.9 2 1 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CENP-F_leu_zip PF10473.9 ORF57249 - 6.4 6.8 25.7 0.18 11.8 14.5 2.7 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Prominin PF05478.11 ORF57249 - 7.4 4.4 17.9 10 3.9 17.9 1.2 1 0 0 1 1 1 0 Prominin Prefoldin_2 PF01920.20 ORF57249 - 8.4 6.4 25.4 6.1 6.8 16.8 2.6 1 1 0 2 2 2 0 Prefoldin subunit Ribosomal_L27A PF00828.19 ORF5453 - 2.1e-10 41.4 0.0 3.5e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF5453 - 0.13 11.6 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 ORF53706 - 2.1e-10 41.4 0.0 3.5e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF53706 - 0.13 11.6 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e DUF445 PF04286.12 ORF50172 - 0.037 13.8 6.6 0.24 11.2 6.6 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF445) DUF4090 PF13319.6 ORF50172 - 0.084 13.1 0.0 0.3 11.4 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF4090) Transglut_i_TM PF14400.6 ORF50172 - 0.14 12.2 1.6 0.33 11.0 0.2 2.1 2 0 0 2 2 2 0 Inactive transglutaminase fused to 7 transmembrane helices HEAT PF02985.22 ORF47702 - 8.3e-06 25.6 0.2 0.58 10.6 0.0 5.1 6 0 0 6 6 6 2 HEAT repeat HEAT_2 PF13646.6 ORF47702 - 3.9e-05 23.9 0.1 0.03 14.7 0.0 3.8 5 0 0 5 5 5 1 HEAT repeats Adaptin_N PF01602.20 ORF47702 - 0.00031 19.4 1.6 0.0022 16.6 1.6 2.2 1 1 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF47702 - 0.00056 20.0 4.4 0.12 12.4 0.2 3.9 3 1 1 4 4 4 1 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 ORF47702 - 0.0021 18.5 0.5 26 5.5 0.0 4.6 4 2 1 5 5 5 0 HEAT-like repeat Vac14_Fab1_bd PF12755.7 ORF47702 - 0.0032 18.0 1.6 0.58 10.8 0.0 3.9 4 1 1 5 5 5 1 Vacuolar 14 Fab1-binding region ParcG PF10274.9 ORF47702 - 0.024 14.8 1.8 2.9 8.0 0.1 3.9 1 1 1 2 2 2 0 Parkin co-regulated protein RPA_C PF08784.11 ORF47702 - 0.16 12.6 0.0 0.52 11.0 0.0 1.8 1 0 0 1 1 1 0 Replication protein A C terminal PKD_channel PF08016.12 ORF46934 - 1.8e-10 40.1 19.0 1.8e-10 40.1 18.3 1.4 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF46934 - 1.2e-07 31.3 25.8 3e-07 29.9 25.9 1.6 1 1 0 1 1 1 1 Ion transport protein Glyco_hydro_38N PF01074.22 ORF44683 - 1.6e-66 224.6 6.1 2.6e-66 224.0 6.1 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF44683 - 6e-17 61.6 0.2 1.4e-16 60.4 0.2 1.6 1 0 0 1 1 1 1 Alpha mannosidase middle domain RabGAP-TBC PF00566.18 ORF417 - 1e-13 51.5 0.4 1.3e-13 51.1 0.4 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Rhodanese PF00581.20 ORF417 - 0.00033 21.2 0.0 0.00062 20.3 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain LAGLIDADG_3 PF14528.6 ORF40459 - 0.11 12.9 0.2 9.7 6.6 0.1 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain DnaB_bind PF10410.9 ORF40459 - 0.19 11.9 0.0 0.41 10.9 0.0 1.5 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase UCH PF00443.29 ORF39112 - 1.1e-24 87.4 0.0 1.4e-24 87.0 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PH PF00169.29 ORF39112 - 3.6e-13 49.9 0.0 6.3e-13 49.2 0.0 1.4 1 0 0 1 1 1 1 PH domain UCH_1 PF13423.6 ORF39112 - 4.5e-12 46.2 0.0 6.7e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PH_11 PF15413.6 ORF39112 - 4.5e-05 23.8 0.1 0.0002 21.8 0.1 2.0 1 1 0 1 1 1 1 Pleckstrin homology domain zf_UBZ PF18439.1 ORF39112 - 0.0069 16.0 3.0 0.61 9.7 0.3 2.5 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger OrfB_Zn_ribbon PF07282.11 ORF39112 - 0.0073 16.2 0.3 0.74 9.8 0.0 2.5 2 0 0 2 2 2 1 Putative transposase DNA-binding domain PH_3 PF14593.6 ORF39112 - 0.023 14.8 0.0 0.069 13.2 0.0 1.7 2 0 0 2 2 2 0 PH domain DZR PF12773.7 ORF39112 - 0.024 14.7 0.1 0.082 12.9 0.1 1.9 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF39112 - 0.028 13.8 1.4 5.5 6.5 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain PH_8 PF15409.6 ORF39112 - 0.11 12.7 0.0 0.6 10.4 0.0 2.1 2 0 0 2 2 2 0 Pleckstrin homology domain CpXC PF14353.6 ORF39112 - 0.28 11.2 1.1 5.4 7.1 0.0 2.4 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_4 PF13717.6 ORF39112 - 0.35 10.8 3.4 1.1 9.3 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 ORF39112 - 0.66 9.8 3.4 22 4.9 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Shisa PF13908.6 ORF34519 - 4.3 7.6 8.8 0.089 13.0 1.3 2.0 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator DDE_Tnp_1_assoc PF13808.6 ORF33122 - 4.8e-33 113.0 0.0 1e-32 112.0 0.0 1.6 1 0 0 1 1 1 1 DDE_Tnp_1-associated DDE_Tnp_1 PF01609.21 ORF33122 - 4.5e-29 101.6 0.9 4.8e-29 101.5 0.3 1.4 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_4 PF13701.6 ORF33122 - 0.0025 16.2 0.0 0.97 7.6 0.0 2.3 2 0 0 2 2 2 2 Transposase DDE domain group 1 Ribosomal_L27A PF00828.19 ORF31602 - 2.1e-10 41.4 0.0 3.5e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF31602 - 0.13 11.6 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e Golgin_A5 PF09787.9 ORF30911 - 0.1 12.1 18.4 0.17 11.4 18.4 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4795 PF16043.5 ORF30911 - 0.35 10.4 22.2 0.11 12.1 8.2 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) ADIP PF11559.8 ORF30911 - 0.5 10.4 27.4 0.082 13.0 22.7 2.1 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding LPP PF04728.13 ORF30911 - 0.67 10.4 8.2 3.7 8.0 1.7 3.0 2 0 0 2 2 2 0 Lipoprotein leucine-zipper SlyX PF04102.12 ORF30911 - 0.78 10.4 9.8 1.3 9.7 0.8 2.9 1 1 2 3 3 3 0 SlyX Filament PF00038.21 ORF30911 - 1.5 8.3 25.0 0.13 11.8 18.9 2.1 2 1 0 2 2 2 0 Intermediate filament protein Atg14 PF10186.9 ORF30911 - 1.7 7.7 25.1 6.2 5.8 25.1 1.9 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CC2-LZ PF16516.5 ORF30911 - 1.9 8.9 22.9 2.2 8.7 10.8 3.3 2 1 2 4 4 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF3450 PF11932.8 ORF30911 - 3.6 6.8 19.1 2.4 7.4 14.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) CENP-F_leu_zip PF10473.9 ORF30911 - 4.9 7.2 25.7 0.18 11.8 14.5 2.9 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SseC PF04888.12 ORF30911 - 5.3 6.6 11.4 3.9 7.0 9.6 1.7 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family Prominin PF05478.11 ORF30911 - 5.5 4.8 17.9 10 3.9 17.9 1.4 1 0 0 1 1 1 0 Prominin XhlA PF10779.9 ORF30911 - 5.7 7.2 19.5 0.27 11.4 6.5 3.9 3 0 0 3 3 3 0 Haemolysin XhlA Prefoldin_2 PF01920.20 ORF30911 - 6.7 6.7 25.4 6.1 6.8 16.8 2.8 1 1 0 2 2 2 0 Prefoldin subunit Jnk-SapK_ap_N PF09744.9 ORF30911 - 7.3 6.8 23.8 0.65 10.2 17.9 2.2 2 1 0 2 2 2 0 JNK_SAPK-associated protein-1 HlyD PF00529.20 ORF29270 - 1.9e-13 50.1 0.0 3.8e-13 49.1 0.0 1.5 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS HlyD_D23 PF16576.5 ORF29270 - 1.7e-11 43.8 1.2 2.1e-09 36.9 0.1 2.3 2 0 0 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 ORF29270 - 1.6e-07 31.0 10.8 1.7e-07 30.9 0.2 3.7 5 0 0 5 5 5 2 Biotin-lipoyl like HlyD_3 PF13437.6 ORF29270 - 2.2e-07 31.5 0.9 0.00011 22.8 0.0 2.7 2 2 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl PF00364.22 ORF29270 - 0.0072 16.1 0.2 1.3 8.9 0.2 2.6 2 0 0 2 2 2 1 Biotin-requiring enzyme Leu_zip PF15294.6 ORF29270 - 0.24 10.9 3.8 0.33 10.4 3.8 1.1 1 0 0 1 1 1 0 Leucine zipper TolA_bind_tri PF16331.5 ORF29270 - 0.65 10.1 6.2 0.84 9.8 1.0 2.3 2 0 0 2 2 2 0 TolA binding protein trimerisation Snapin_Pallidin PF14712.6 ORF29270 - 6.5 7.3 7.1 3.9 8.0 0.1 2.7 2 1 0 2 2 2 0 Snapin/Pallidin AAA PF00004.29 ORF24844 - 1.7e-44 151.4 0.1 4.9e-44 150.0 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 ORF24844 - 2e-09 37.2 0.0 1.3e-08 34.7 0.0 2.2 2 0 0 2 2 2 1 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 ORF24844 - 3.7e-08 33.5 0.1 1.5e-07 31.5 0.1 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_3 PF17862.1 ORF24844 - 4.7e-08 32.7 0.0 1e-07 31.6 0.0 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 ORF24844 - 7.3e-08 32.7 0.0 2.3e-07 31.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 ORF24844 - 9.8e-06 26.0 0.1 0.00047 20.6 0.0 2.4 1 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF24844 - 3.7e-05 23.5 0.0 0.00015 21.6 0.0 2.0 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain RNA_helicase PF00910.22 ORF24844 - 9.2e-05 22.8 0.0 0.00021 21.6 0.0 1.6 1 0 0 1 1 1 1 RNA helicase DUF815 PF05673.13 ORF24844 - 0.00011 21.4 0.0 0.00025 20.3 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 ORF24844 - 0.00016 22.0 0.4 0.013 15.8 0.0 2.5 1 1 1 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF24844 - 0.00061 20.3 0.0 0.0014 19.2 0.0 1.8 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 ORF24844 - 0.0012 18.2 0.1 0.0034 16.6 0.0 1.9 1 1 1 2 2 2 1 TIP49 P-loop domain AAA_28 PF13521.6 ORF24844 - 0.0017 18.6 0.0 0.0036 17.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 ORF24844 - 0.002 17.6 0.1 0.0053 16.2 0.1 1.7 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 ORF24844 - 0.0021 17.6 0.1 0.014 15.0 0.1 2.1 1 1 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF24844 - 0.0031 17.2 0.1 0.16 11.6 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_30 PF13604.6 ORF24844 - 0.0044 16.8 0.1 0.012 15.4 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF24844 - 0.0045 16.7 0.1 0.012 15.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF24844 - 0.0053 16.5 0.0 0.012 15.3 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_3 PF07726.11 ORF24844 - 0.0061 16.4 0.1 0.018 14.9 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 ORF24844 - 0.0064 16.4 0.2 0.25 11.2 0.0 3.0 3 0 0 3 3 3 1 NTPase AAA_14 PF13173.6 ORF24844 - 0.0087 16.1 0.1 0.032 14.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF24844 - 0.011 15.9 0.0 0.035 14.2 0.0 2.0 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 ORF24844 - 0.013 15.4 0.3 0.38 10.6 0.0 3.0 3 0 0 3 3 3 0 NACHT domain TsaE PF02367.17 ORF24844 - 0.014 15.4 0.0 0.025 14.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 ORF24844 - 0.02 14.0 0.0 0.042 12.9 0.0 1.5 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 ORF24844 - 0.028 14.0 0.3 0.11 12.1 0.1 1.9 1 1 0 2 2 2 0 AAA domain ATPase PF06745.13 ORF24844 - 0.05 12.9 0.7 0.23 10.8 0.0 2.2 3 0 0 3 3 3 0 KaiC AAA_17 PF13207.6 ORF24844 - 0.11 13.0 0.0 0.39 11.2 0.0 2.1 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 ORF24844 - 0.16 12.3 0.2 0.51 10.7 0.1 1.9 2 0 0 2 2 1 0 AAA domain Pyr_redox_2 PF07992.14 ORF22679 - 8.3e-41 140.1 0.1 1.4e-40 139.4 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF22679 - 1.8e-30 105.4 0.1 4.5e-30 104.1 0.1 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF22679 - 2.1e-17 63.5 0.0 4.6e-17 62.4 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF22679 - 0.0013 18.1 0.0 0.042 13.1 0.0 2.4 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 ORF22679 - 0.01 15.7 0.0 0.025 14.5 0.0 1.7 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 ORF22679 - 0.032 14.7 0.0 0.072 13.5 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding Lycopene_cycl PF05834.12 ORF22679 - 0.073 12.1 0.2 0.56 9.2 0.0 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein NAD_binding_8 PF13450.6 ORF22679 - 0.087 13.1 0.0 0.32 11.3 0.0 2.0 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Fer4_11 PF13247.6 ORF19710 - 7.9e-38 128.6 5.9 1.6e-37 127.6 5.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Nitr_red_bet_C PF14711.6 ORF19710 - 1.8e-31 107.7 0.0 3.3e-31 106.8 0.0 1.5 1 0 0 1 1 1 1 Respiratory nitrate reductase beta C-terminal Fer4_10 PF13237.6 ORF19710 - 7.8e-06 25.9 4.1 7.8e-06 25.9 4.1 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF19710 - 1e-05 26.0 5.5 1e-05 26.0 5.5 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF19710 - 4.4e-05 23.4 11.5 0.0019 18.2 0.2 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 ORF19710 - 0.16 12.1 13.4 3.1 8.0 13.5 2.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.27 ORF19710 - 3.8 7.5 15.9 1.2 9.1 0.9 4.0 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_4 PF12800.7 ORF19710 - 7.5 7.3 15.6 0.7 10.5 0.9 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 ORF19710 - 7.5 7.2 10.7 2.8 8.6 0.4 3.1 2 1 0 2 2 2 0 4Fe-4S dicluster domain Ribosomal_L27A PF00828.19 ORF14708 - 2.1e-10 41.4 0.0 3.5e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF14708 - 0.13 11.6 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e Radical_SAM PF04055.21 ORF112159 - 1.3e-19 71.2 0.0 2e-19 70.6 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily HemN_C PF06969.16 ORF112159 - 1.1e-06 28.6 0.0 3.3e-06 27.1 0.0 1.9 2 0 0 2 2 2 1 HemN C-terminal domain Fer4_14 PF13394.6 ORF112159 - 0.012 15.7 0.0 0.017 15.2 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain Fer4_12 PF13353.6 ORF112159 - 0.17 12.1 0.0 0.29 11.4 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF3837 PF12939.7 NODE_15429_length_1131_cov_37.517336_g11658_i0reverse_frame_1 - 0.028 14.8 0.0 2.9 8.3 0.0 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF3837) HSP33 PF01430.19 NODE_15429_length_1131_cov_37.517336_g11658_i0reverse_frame_1 - 0.084 12.3 5.8 1.9 7.8 0.1 3.1 2 1 1 3 3 3 0 Hsp33 protein rpo132 PF12415.8 NODE_15384_length_1133_cov_108.281421_g11618_i0reverse_frame_2 - 0.02 14.2 0.5 0.038 13.3 0.5 1.5 1 0 0 1 1 1 0 Poxvirus DNA dependent RNA polymerase PHD PF00628.29 NODE_15362_length_1134_cov_155.186533_g3523_i2reverse_frame_2 - 0.0022 17.8 3.7 0.0064 16.4 3.7 1.8 1 0 0 1 1 1 1 PHD-finger zf-B_box PF00643.24 NODE_15362_length_1134_cov_155.186533_g3523_i2reverse_frame_2 - 0.0031 17.6 7.9 0.0031 17.6 7.9 2.1 2 0 0 2 2 2 1 B-box zinc finger PHD_2 PF13831.6 NODE_15362_length_1134_cov_155.186533_g3523_i2reverse_frame_2 - 0.02 14.5 1.6 0.05 13.2 1.6 1.7 1 0 0 1 1 1 0 PHD-finger BBP1_C PF15272.6 NODE_15362_length_1134_cov_155.186533_g3523_i2reverse_frame_2 - 0.25 11.2 35.4 0.41 10.4 10.9 2.9 1 1 1 2 2 2 0 Spindle pole body component BBP1, C-terminal Prok-RING_1 PF14446.6 NODE_15362_length_1134_cov_155.186533_g3523_i2reverse_frame_2 - 0.62 10.0 4.9 1.3 9.0 4.9 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF1192 PF06698.11 NODE_15362_length_1134_cov_155.186533_g3523_i2reverse_frame_2 - 2.3 8.3 9.8 9.1 6.4 0.2 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1192) SlyX PF04102.12 NODE_15362_length_1134_cov_155.186533_g3523_i2reverse_frame_2 - 3.2 8.4 12.8 0.29 11.8 1.3 3.8 2 1 1 3 3 3 0 SlyX RCC1_2 PF13540.6 ORF97287 - 6.3e-22 76.8 24.9 0.012 15.4 0.1 9.3 9 0 0 9 9 9 9 Regulator of chromosome condensation (RCC1) repeat FtsQ PF03799.15 ORF97287 - 3.3e-05 24.7 0.2 7.8 7.4 0.0 5.0 1 1 4 6 6 6 1 Cell division protein FtsQ Methyltransf_29 PF03141.16 ORF97287 - 0.074 11.6 1.2 6.7 5.1 0.0 3.4 3 1 1 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Cyclophil_like PF04126.13 ORF97287 - 0.082 12.7 0.1 0.71 9.7 0.0 2.4 1 1 1 2 2 2 0 Cyclophilin-like BTB_2 PF02214.22 ORF94670 - 3e-07 30.7 0.0 6.9e-07 29.5 0.0 1.6 1 0 0 1 1 1 1 BTB/POZ domain SPRY PF00622.28 ORF94670 - 0.00021 21.4 0.0 0.00079 19.5 0.0 1.9 2 0 0 2 2 2 1 SPRY domain PAS_4 PF08448.10 ORF94670 - 0.011 16.0 2.1 0.028 14.7 0.7 2.3 2 0 0 2 2 2 0 PAS fold DUF2854 PF11016.8 ORF94670 - 0.058 13.3 0.1 0.093 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) DivIC PF04977.15 ORF94670 - 0.08 12.7 2.5 0.19 11.6 2.5 1.5 1 0 0 1 1 1 0 Septum formation initiator TMF_TATA_bd PF12325.8 ORF94670 - 0.26 11.5 4.3 0.43 10.8 4.3 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding ZapB PF06005.12 ORF94670 - 0.33 11.4 4.7 0.69 10.4 4.7 1.5 1 0 0 1 1 1 0 Cell division protein ZapB tRNA-synt_2 PF00152.20 ORF93054 - 3.5e-82 276.0 0.1 4.2e-82 275.7 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF93054 - 0.0014 18.1 0.0 0.0056 16.2 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) MFS_1 PF07690.16 ORF9191 - 7.8e-12 44.8 20.7 1.4e-11 44.0 20.6 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF9191 - 0.00088 17.9 5.1 0.00088 17.9 5.1 2.5 2 1 0 2 2 2 1 MFS/sugar transport protein AAA PF00004.29 ORF8482 - 2.1e-37 128.5 0.0 4.9e-37 127.3 0.0 1.7 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF8482 - 4.1e-13 48.9 0.0 1.8e-12 46.8 0.0 2.1 2 0 0 2 2 2 1 AAA+ lid domain RuvB_N PF05496.12 ORF8482 - 6.7e-06 25.9 0.0 1.4e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Vps4_C PF09336.10 ORF8482 - 4.2e-05 23.5 0.6 0.00013 21.8 0.5 1.9 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_2 PF07724.14 ORF8482 - 4.8e-05 23.5 0.0 9.5e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 ORF8482 - 0.00012 22.1 0.0 0.00035 20.6 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF8482 - 0.00013 22.2 0.4 0.0028 17.9 0.3 2.5 1 1 1 2 2 2 1 AAA domain AAA_24 PF13479.6 ORF8482 - 0.00036 20.3 0.0 0.00083 19.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF8482 - 0.00049 20.5 0.3 0.011 16.1 0.0 3.0 3 0 0 3 3 3 1 RNA helicase DUF815 PF05673.13 ORF8482 - 0.00059 19.1 0.0 0.0011 18.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_14 PF13173.6 ORF8482 - 0.00064 19.8 0.0 0.0013 18.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 ORF8482 - 0.00081 18.7 0.0 0.0015 17.9 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_18 PF13238.6 ORF8482 - 0.00089 19.8 0.2 0.0064 17.0 0.0 2.4 1 1 1 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF8482 - 0.00096 18.8 0.8 0.085 12.4 0.3 2.6 2 1 0 3 3 3 1 AAA domain Sigma54_activat PF00158.26 ORF8482 - 0.0016 18.2 0.0 0.7 9.6 0.0 2.9 3 0 0 3 3 3 1 Sigma-54 interaction domain AAA_7 PF12775.7 ORF8482 - 0.0016 18.0 0.1 0.0033 17.0 0.1 1.6 1 1 0 1 1 1 1 P-loop containing dynein motor region Mg_chelatase PF01078.21 ORF8482 - 0.0016 17.9 0.0 0.0039 16.6 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 ORF8482 - 0.0017 18.1 0.0 0.0032 17.2 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein ATPase PF06745.13 ORF8482 - 0.0032 16.8 0.4 0.65 9.3 0.1 2.3 1 1 1 2 2 2 1 KaiC AAA_16 PF13191.6 ORF8482 - 0.0044 17.4 0.0 0.012 16.0 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF8482 - 0.015 15.5 0.0 0.027 14.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF8482 - 0.02 14.9 0.0 0.032 14.2 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 ORF8482 - 0.074 12.5 0.0 0.14 11.6 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_28 PF13521.6 ORF8482 - 0.088 13.0 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain Parvo_NS1 PF01057.17 ORF8482 - 0.11 11.5 0.1 0.2 10.7 0.1 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_3 PF07726.11 ORF8482 - 0.12 12.3 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Guanylate_kin PF00625.21 ORF8482 - 0.12 12.1 0.0 0.37 10.4 0.0 1.8 2 0 0 2 2 2 0 Guanylate kinase CPT PF07931.12 ORF8482 - 0.12 12.2 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein NACHT PF05729.12 ORF8482 - 0.14 12.1 0.3 0.72 9.7 0.1 2.1 1 1 1 2 2 2 0 NACHT domain AAA_30 PF13604.6 ORF8482 - 0.14 11.8 0.0 0.36 10.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain ADH_zinc_N_2 PF13602.6 ORF74709 - 6.7e-12 46.6 0.0 1.2e-10 42.5 0.0 2.4 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 ORF74709 - 7e-06 26.0 0.0 1.8e-05 24.7 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF74709 - 0.00088 19.1 0.0 0.026 14.4 0.0 2.6 1 1 1 2 2 2 2 Alcohol dehydrogenase GroES-like domain MscS_porin PF12795.7 ORF74593 - 2.4 7.6 11.7 0.056 13.0 4.9 1.6 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain zf-B_box PF00643.24 ORF7079 - 0.00013 22.0 3.8 0.00023 21.3 3.8 1.4 1 0 0 1 1 1 1 B-box zinc finger WD40 PF00400.32 ORF7079 - 0.016 16.0 0.7 0.27 12.2 0.1 2.8 3 0 0 3 3 3 0 WD domain, G-beta repeat DUF3336 PF11815.8 ORF7079 - 0.075 12.7 0.2 0.43 10.3 0.0 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF3336) Dynein_C PF18199.1 ORF69765 - 1.5e-94 316.7 0.0 1.8e-94 316.5 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF69765 - 1.6e-07 31.3 0.0 3.6e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain DUF2968 PF11180.8 ORF68724 - 1 8.9 8.2 2 8.0 8.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) DUF4407 PF14362.6 ORF68724 - 6.7 6.0 7.8 10 5.4 7.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ABC_tran PF00005.27 ORF66727 - 3.1e-28 99.0 0.0 5.1e-28 98.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF66727 - 1.1e-09 38.6 0.4 0.00053 19.9 0.1 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_membrane PF00664.23 ORF66727 - 3.6e-09 36.7 0.2 4.7e-09 36.3 0.2 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF66727 - 2.5e-07 30.4 0.2 0.017 14.5 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 ORF66727 - 0.0001 22.2 0.0 0.00018 21.4 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF66727 - 0.00034 20.3 0.1 0.00067 19.3 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF66727 - 0.0017 18.4 0.5 0.0037 17.3 0.3 1.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_22 PF13401.6 ORF66727 - 0.0038 17.5 0.0 0.014 15.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 ORF66727 - 0.012 14.9 0.0 0.021 14.1 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_15 PF13175.6 ORF66727 - 0.016 14.9 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_16 PF13191.6 ORF66727 - 0.016 15.6 0.9 0.039 14.3 0.9 1.7 1 1 0 1 1 1 0 AAA ATPase domain Dynamin_N PF00350.23 ORF66727 - 0.021 14.9 0.8 0.042 13.9 0.8 1.4 1 0 0 1 1 1 0 Dynamin family DUF815 PF05673.13 ORF66727 - 0.035 13.3 0.0 0.05 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DUF2813 PF11398.8 ORF66727 - 0.041 13.1 0.1 0.065 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) AAA_25 PF13481.6 ORF66727 - 0.067 12.8 1.7 0.14 11.7 0.4 2.3 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF66727 - 0.069 13.7 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AIG1 PF04548.16 ORF66727 - 0.1 11.9 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 AIG1 family KOW PF00467.29 ORF63461 - 0.0012 18.7 0.1 0.003 17.5 0.1 1.7 1 0 0 1 1 1 1 KOW motif Rhomboid_SP PF12595.8 ORF63461 - 0.026 13.9 0.6 0.048 13.0 0.6 1.4 1 0 0 1 1 1 0 Rhomboid serine protease EF-hand_1 PF00036.32 ORF58012 - 6.7e-14 50.3 1.1 4.8e-05 22.6 0.0 3.5 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF58012 - 5.2e-12 44.7 2.2 0.00093 19.0 0.0 3.6 3 0 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF58012 - 5.2e-10 39.6 1.6 6.7e-05 23.3 0.1 3.3 2 1 2 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF58012 - 6.6e-09 34.9 2.7 0.00025 20.4 0.0 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF58012 - 2.2e-05 24.2 0.6 0.021 14.6 0.0 3.4 3 0 0 3 3 3 1 EF-hand domain pair BATS PF06968.13 ORF4722 - 3.4e-21 75.2 0.0 7.2e-21 74.1 0.0 1.6 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 ORF4722 - 2.1e-09 38.0 0.0 4e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Pyr_redox_2 PF07992.14 ORF46444 - 2.9e-51 174.5 0.0 3.7e-51 174.1 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rbx_binding PF18113.1 ORF46444 - 1.8e-21 75.7 0.0 4.6e-21 74.4 0.0 1.7 1 0 0 1 1 1 1 Rubredoxin binding C-terminal domain Pyr_redox PF00070.27 ORF46444 - 4.2e-18 65.7 0.0 8e-17 61.6 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF46444 - 2.1e-14 53.5 0.0 2.6e-14 53.2 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF46444 - 3.9e-10 39.8 1.2 0.02 14.5 0.4 3.2 2 1 1 3 3 3 3 FAD dependent oxidoreductase K_oxygenase PF13434.6 ORF46444 - 1.1e-09 37.9 0.1 4.4e-06 26.1 0.0 3.2 1 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 ORF46444 - 9.4e-06 24.6 2.0 0.18 10.5 0.0 3.1 2 1 1 3 3 3 3 HI0933-like protein NAD_binding_7 PF13241.6 ORF46444 - 1.3e-05 25.6 0.0 0.0011 19.4 0.0 2.4 2 0 0 2 2 2 1 Putative NAD(P)-binding NAD_binding_9 PF13454.6 ORF46444 - 0.00013 22.0 3.9 0.55 10.2 0.0 3.8 3 1 0 4 4 4 2 FAD-NAD(P)-binding 3HCDH_N PF02737.18 ORF46444 - 0.0008 19.3 0.0 0.0027 17.6 0.0 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 ORF46444 - 0.0015 18.8 0.1 0.21 11.9 0.0 2.7 2 1 0 2 2 2 1 TrkA-N domain Lycopene_cycl PF05834.12 ORF46444 - 0.0016 17.6 2.0 2.3 7.1 0.0 3.1 2 1 0 3 3 3 2 Lycopene cyclase protein ThiF PF00899.21 ORF46444 - 0.0031 16.9 0.1 0.0055 16.1 0.1 1.3 1 0 0 1 1 1 1 ThiF family GIDA PF01134.22 ORF46444 - 0.0053 15.9 0.5 0.12 11.4 0.3 2.3 2 1 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 ORF46444 - 0.011 15.0 1.8 0.027 13.7 0.3 2.2 2 1 1 3 3 3 0 FAD binding domain NAD_binding_8 PF13450.6 ORF46444 - 0.018 15.2 0.1 0.084 13.1 0.0 2.1 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain ApbA PF02558.16 ORF46444 - 0.057 13.1 1.3 0.23 11.1 0.3 2.3 3 0 0 3 3 3 0 Ketopantoate reductase PanE/ApbA FAD_oxidored PF12831.7 ORF46444 - 0.08 12.3 1.3 2.2 7.5 0.4 2.4 3 0 0 3 3 3 0 FAD dependent oxidoreductase F420_oxidored PF03807.17 ORF46444 - 0.099 13.2 0.2 16 6.2 0.0 2.6 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Rnk_N PF14760.6 ORF44653 - 8.8e-05 22.9 0.0 50 4.5 0.0 6.0 6 0 0 6 6 6 0 Rnk N-terminus DUF1192 PF06698.11 ORF44653 - 0.012 15.6 7.3 73 3.5 0.0 6.0 6 0 0 6 6 6 0 Protein of unknown function (DUF1192) Ten1_2 PF15490.6 ORF44653 - 0.061 13.0 5.5 0.4 10.4 0.4 3.1 1 1 2 3 3 3 0 Telomere-capping, CST complex subunit ATG16 PF08614.11 ORF44653 - 0.16 12.2 25.8 0.022 15.0 3.5 3.2 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) COG4 PF08318.12 ORF44653 - 0.53 9.3 12.6 2.3 7.2 0.4 3.9 1 1 2 3 3 3 0 COG4 transport protein BRE1 PF08647.11 ORF44653 - 1.6 8.8 31.0 0.46 10.6 4.8 4.2 1 1 2 4 4 4 0 BRE1 E3 ubiquitin ligase TMPIT PF07851.13 ORF44653 - 2.5 7.3 20.3 0.92 8.7 3.4 3.3 1 1 2 3 3 3 0 TMPIT-like protein HMG_box PF00505.19 ORF4211 - 7.6e-16 58.3 26.3 5.1e-10 39.6 3.8 4.2 3 1 1 4 4 4 3 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF4211 - 1.3e-10 41.7 19.9 2e-06 28.3 1.0 4.3 3 2 1 4 4 4 3 HMG-box domain DIM1 PF02966.16 ORF4211 - 0.11 12.2 0.3 0.79 9.5 0.0 2.1 2 0 0 2 2 2 0 Mitosis protein DIM1 RNA_pol_Rpb2_6 PF00562.28 ORF41417 - 4.2e-87 292.7 0.0 4.9e-87 292.5 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 ORF41417 - 2.8e-30 104.5 0.2 7e-30 103.3 0.2 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 Chorismate_bind PF00425.18 ORF34938 - 1.8e-82 276.8 0.0 2.3e-82 276.5 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 ORF34938 - 8.2e-10 39.1 0.2 8.7e-09 35.7 0.0 2.4 2 0 0 2 2 2 1 Anthranilate synthase component I, N terminal region HalX PF08663.10 ORF34938 - 0.0063 16.8 0.4 0.022 15.1 0.1 2.0 2 0 0 2 2 2 1 HalX domain Flg_hook PF02120.16 ORF34938 - 0.0084 16.0 0.1 0.021 14.7 0.1 1.6 1 0 0 1 1 1 1 Flagellar hook-length control protein FliK Lipase_GDSL_3 PF14606.6 ORF34938 - 0.035 14.3 0.1 4.9 7.2 0.0 2.4 2 0 0 2 2 2 0 GDSL-like Lipase/Acylhydrolase family Prok-RING_2 PF14445.6 ORF32371 - 7.8 6.7 6.9 0.37 11.0 0.7 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 2 Rnk_N PF14760.6 ORF28158 - 8.8e-05 22.9 0.0 50 4.5 0.0 6.0 6 0 0 6 6 6 0 Rnk N-terminus DUF1192 PF06698.11 ORF28158 - 0.012 15.6 7.3 73 3.5 0.0 6.0 6 0 0 6 6 6 0 Protein of unknown function (DUF1192) Ten1_2 PF15490.6 ORF28158 - 0.061 13.0 5.5 0.4 10.4 0.4 3.1 1 1 2 3 3 3 0 Telomere-capping, CST complex subunit ATG16 PF08614.11 ORF28158 - 0.16 12.2 25.8 0.022 15.0 3.5 3.2 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) COG4 PF08318.12 ORF28158 - 0.53 9.3 12.6 2.3 7.2 0.4 3.9 1 1 2 3 3 3 0 COG4 transport protein BRE1 PF08647.11 ORF28158 - 1.6 8.8 31.0 0.46 10.6 4.8 4.2 1 1 2 4 4 4 0 BRE1 E3 ubiquitin ligase TMPIT PF07851.13 ORF28158 - 2.5 7.3 20.3 0.92 8.7 3.4 3.3 1 1 2 3 3 3 0 TMPIT-like protein zf-C3HC4_2 PF13923.6 ORF20895 - 3.9e-07 29.8 2.5 9.3e-07 28.6 2.5 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF20895 - 1.5e-06 28.4 2.4 4.2e-06 27.0 2.4 1.7 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF20895 - 2.5e-06 27.2 2.1 6.3e-06 26.0 2.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF20895 - 3.4e-06 27.1 2.8 8.2e-06 25.9 2.8 1.7 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF20895 - 3.4e-06 27.0 1.5 9.4e-06 25.6 1.5 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF20895 - 1.2e-05 25.2 2.5 3.1e-05 23.9 2.5 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF20895 - 0.00018 21.3 2.0 0.00041 20.2 2.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF20895 - 0.0047 16.8 2.6 0.01 15.7 2.6 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 ORF20895 - 0.0052 17.0 1.4 0.013 15.7 1.4 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-P11 PF03854.14 ORF20895 - 0.011 15.4 1.5 0.024 14.3 1.5 1.5 1 0 0 1 1 1 0 P-11 zinc finger zf-RING_4 PF14570.6 ORF20895 - 0.028 14.2 2.1 0.075 12.8 2.1 1.7 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_6 PF14835.6 ORF20895 - 0.032 14.1 0.6 0.069 13.0 0.6 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_10 PF16685.5 ORF20895 - 0.054 13.6 1.6 0.19 11.9 1.3 2.0 2 0 0 2 2 2 0 zinc RING finger of MSL2 Rtf2 PF04641.12 ORF20895 - 0.076 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger DUF3806 PF12713.7 ORF20895 - 0.14 11.9 0.1 0.93 9.3 0.1 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3806) DUF4381 PF14316.6 ORF20895 - 0.53 10.5 2.5 0.56 10.4 0.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) zf-RING_11 PF17123.5 ORF20895 - 5.8 6.7 6.8 9 6.1 0.9 2.8 3 0 0 3 3 2 0 RING-like zinc finger MBOAT PF03062.19 ORF17851 - 2.9e-06 26.9 3.4 5e-06 26.1 3.4 1.4 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family MBOAT_2 PF13813.6 ORF17851 - 2.4e-05 24.5 3.9 5.8e-05 23.3 3.9 1.7 1 0 0 1 1 1 1 Membrane bound O-acyl transferase family GHMP_kinases_N PF00288.26 ORF17851 - 0.26 11.6 0.0 0.26 11.6 0.0 2.7 3 0 0 3 3 3 0 GHMP kinases N terminal domain DUF3490 PF11995.8 ORF17631 - 0.26 11.1 10.1 0.38 10.6 8.7 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF3490) JLPA PF16668.5 ORF17603 - 0.0017 17.5 1.9 0.0028 16.8 1.9 1.3 1 0 0 1 1 1 1 Adhesin from Campylobacter HAP1_N PF04849.13 ORF16747 - 0.00057 19.2 5.5 0.00057 19.2 5.5 2.2 2 0 0 2 2 2 1 HAP1 N-terminal conserved region U-box PF04564.15 ORF16747 - 0.0013 18.8 0.3 0.0043 17.2 0.1 2.0 2 0 0 2 2 2 1 U-box domain DUF4286 PF14114.6 ORF16747 - 0.0047 17.4 0.7 0.0047 17.4 0.7 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4286) TED PF08341.11 ORF16747 - 0.0074 16.6 2.1 0.02 15.2 0.3 2.5 2 0 0 2 2 2 1 Thioester domain tRNA-synt_2 PF00152.20 ORF15925 - 3.5e-82 276.0 0.1 4.2e-82 275.7 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF15925 - 0.0014 18.1 0.0 0.0056 16.2 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) DUF4804 PF16062.5 ORF14853 - 2.1e-44 152.1 0.0 1.5e-27 96.6 0.0 2.8 1 1 1 2 2 2 2 Domain of unknown function (DUF4804) Abhydrolase_3 PF07859.13 ORF104078 - 7.1e-21 75.0 0.0 1.4e-20 74.1 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF104078 - 1.3e-07 30.8 0.2 2e-07 30.2 0.2 1.4 1 0 0 1 1 1 1 Steryl acetyl hydrolase Peptidase_M41 PF01434.18 ORF10334 - 2.7e-36 125.2 2.9 5.6e-36 124.2 2.9 1.5 1 1 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 ORF10334 - 4.1e-18 66.1 0.0 9.2e-18 64.9 0.0 1.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF10334 - 3.8e-11 42.6 0.1 3.8e-11 42.6 0.1 2.2 3 0 0 3 3 3 1 AAA+ lid domain Reprolysin_3 PF13582.6 ORF10334 - 0.017 15.6 0.0 0.03 14.9 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Apolipoprotein PF01442.18 NODE_15460_length_1130_cov_54.315982_g11682_i0reverse_frame_3 - 0.8 9.5 24.3 0.012 15.5 7.0 3.9 1 1 2 3 3 3 0 Apolipoprotein A1/A4/E domain Sec23_helical PF04815.15 NODE_15460_length_1130_cov_54.315982_g11682_i0reverse_frame_3 - 2.6 7.9 6.6 0.95 9.3 0.4 3.1 2 1 1 3 3 3 0 Sec23/Sec24 helical domain Intimin_C PF07979.11 NODE_15460_length_1130_cov_54.315982_g11682_i0reverse_frame_3 - 8.3 6.9 9.1 23 5.5 0.0 3.1 3 1 0 3 3 3 0 Intimin C-type lectin domain PPR_2 PF13041.6 ORF95459 - 2.9e-34 117.0 0.0 6.7e-08 32.6 0.0 8.0 3 2 5 9 9 9 7 PPR repeat family PPR PF01535.20 ORF95459 - 2.4e-27 93.2 0.5 0.0018 18.4 0.0 9.1 9 1 0 9 9 9 6 PPR repeat PPR_3 PF13812.6 ORF95459 - 4.4e-25 87.5 0.0 9.1e-07 28.9 0.0 5.8 3 2 5 9 9 8 8 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF95459 - 4.9e-16 58.1 0.0 0.038 13.7 0.0 8.5 8 0 0 8 8 8 2 PPR repeat PPR_long PF17177.4 ORF95459 - 5.3e-11 42.3 2.2 0.00018 20.9 0.1 3.8 1 1 3 4 4 4 4 Pentacotripeptide-repeat region of PRORP Clathrin PF00637.20 ORF95459 - 0.00015 21.7 1.3 3.3 7.6 0.4 5.1 3 1 2 5 5 5 1 Region in Clathrin and VPS TPR_14 PF13428.6 ORF95459 - 0.013 16.2 15.3 9.3 7.4 0.9 5.7 3 1 3 6 6 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF95459 - 0.027 14.5 9.8 6.1 7.1 0.3 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat Snf7 PF03357.21 ORF95459 - 0.046 13.3 0.1 24 4.5 0.1 3.0 2 1 1 3 3 3 0 Snf7 TPR_19 PF14559.6 ORF95459 - 0.078 13.5 5.1 3.2 8.3 0.3 2.9 2 1 1 3 3 2 0 Tetratricopeptide repeat DUF771 PF05595.11 ORF95459 - 0.19 11.7 0.0 28 4.8 0.0 3.2 4 0 0 4 4 4 0 Domain of unknown function (DUF771) PAW PF04721.17 ORF95459 - 0.37 10.5 2.8 1.4 8.7 0.0 2.9 3 1 0 3 3 3 0 PNGase C-terminal domain, mannose-binding module PAW TPR_2 PF07719.17 ORF95459 - 0.53 10.5 6.0 24 5.4 0.1 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF95459 - 0.81 10.5 6.2 0.89 10.3 0.8 3.3 4 0 0 4 4 3 0 Tetratricopeptide repeat DUF3322 PF11795.8 ORF95459 - 0.88 9.6 7.7 1.4 8.9 0.7 3.4 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) PTS_EIIA_2 PF00359.22 ORF94576 - 4.6e-34 117.4 0.1 2.4e-29 102.1 0.0 2.6 3 0 0 3 3 3 2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PTS-HPr PF00381.19 ORF94576 - 1.9e-26 92.1 1.1 3.7e-25 88.0 0.1 2.8 2 0 0 2 2 2 1 PTS HPr component phosphorylation site Nif11 PF07862.11 ORF94576 - 0.054 13.8 0.1 0.19 12.0 0.1 1.9 1 0 0 1 1 1 0 Nif11 domain V_ATPase_I PF01496.19 ORF92984 - 0.44 8.4 6.1 0.49 8.3 6.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family GAS PF13851.6 ORF92984 - 0.7 9.2 24.4 0.38 10.1 17.9 3.0 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding Hemagglutinin PF00509.18 ORF92984 - 0.95 7.8 2.3 1.4 7.3 2.3 1.1 1 0 0 1 1 1 0 Haemagglutinin Pirin PF02678.16 ORF89648 - 4e-24 84.7 0.5 6.5e-24 84.0 0.5 1.3 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 ORF89648 - 3.5e-16 59.4 0.0 6.1e-16 58.7 0.0 1.4 1 0 0 1 1 1 1 Pirin C-terminal cupin domain Chloroa_b-bind PF00504.21 ORF84548 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF84548 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF84548 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF84548 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF84548 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF84548 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Chloroa_b-bind PF00504.21 ORF8255 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF8255 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF8255 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF8255 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF8255 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF8255 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Sigma_reg_N PF13800.6 ORF82277 - 1.6e-05 25.1 3.7 0.0047 17.2 0.6 2.4 2 0 0 2 2 2 2 Sigma factor regulator N-terminal Srg PF02118.21 ORF82277 - 0.0011 18.7 1.8 0.37 10.4 0.1 2.3 2 0 0 2 2 2 2 Srg family chemoreceptor O-antigen_lig PF13425.6 ORF82277 - 0.0027 16.6 0.9 0.0053 15.6 0.9 1.5 1 0 0 1 1 1 1 O-antigen ligase like membrane protein Shisa PF13908.6 ORF82277 - 0.054 13.7 0.2 0.054 13.7 0.2 3.2 3 1 0 3 3 3 0 Wnt and FGF inhibitory regulator SdpI PF13630.6 ORF82277 - 0.1 12.8 1.6 43 4.3 0.0 3.2 3 0 0 3 3 3 0 SdpI/YhfL protein family Ninjurin PF04923.12 ORF82277 - 0.23 11.4 2.0 0.58 10.1 1.3 1.9 1 1 1 2 2 2 0 Ninjurin Pepsin-I3 PF06394.13 ORF81121 - 0.035 14.3 4.9 0.1 12.8 0.4 3.2 3 0 0 3 3 3 0 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF81121 - 3.9 7.9 11.4 0.83 10.0 0.2 3.7 3 2 1 4 4 4 0 HalX domain Actin PF00022.19 ORF75056 - 3e-123 411.5 0.0 2e-122 408.8 0.0 1.8 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF75056 - 0.013 14.3 0.0 1.5 7.6 0.0 2.3 2 1 0 2 2 2 0 MreB/Mbl protein Pepsin-I3 PF06394.13 ORF74633 - 0.035 14.3 4.9 0.1 12.8 0.4 3.2 3 0 0 3 3 3 0 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF74633 - 3.9 7.9 11.4 0.83 10.0 0.2 3.7 3 2 1 4 4 4 0 HalX domain Crisp PF08562.10 ORF69745 - 0.73 10.5 7.4 0.19 12.4 2.0 2.3 2 0 0 2 2 2 0 Crisp DUF4200 PF13863.6 ORF6906 - 1.5e-10 41.5 18.3 1.5e-10 41.5 18.3 2.9 3 0 0 3 3 3 1 Domain of unknown function (DUF4200) Effector_1 PF04518.12 ORF6906 - 0.5 9.4 10.8 0.051 12.7 5.7 1.8 2 0 0 2 2 2 0 Effector from type III secretion system DASH_Dad4 PF08650.10 ORF6906 - 0.8 9.7 10.1 3.1 7.8 0.9 3.1 2 1 0 2 2 2 0 DASH complex subunit Dad4 Ost4 PF10215.9 ORF6375 - 0.2 11.5 0.1 0.36 10.7 0.1 1.4 1 0 0 1 1 1 0 Oligosaccaryltransferase Pepsin-I3 PF06394.13 ORF63154 - 0.035 14.3 4.9 0.1 12.8 0.4 3.2 3 0 0 3 3 3 0 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF63154 - 3.9 7.9 11.4 0.83 10.0 0.2 3.7 3 2 1 4 4 4 0 HalX domain Chloroa_b-bind PF00504.21 ORF62758 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF62758 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF62758 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF62758 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF62758 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF62758 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Arrestin_N PF00339.29 ORF58960 - 1.2e-11 44.9 1.6 6.9e-10 39.1 0.1 3.0 3 0 0 3 3 3 1 Arrestin (or S-antigen), N-terminal domain Arrestin_C PF02752.22 ORF58960 - 0.00037 20.9 0.1 0.0093 16.4 0.0 2.3 2 0 0 2 2 2 1 Arrestin (or S-antigen), C-terminal domain Chloroa_b-bind PF00504.21 ORF42764 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF42764 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF42764 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF42764 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF42764 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF42764 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain OEP PF02321.18 ORF42008 - 3.8e-21 75.7 5.5 2.5e-10 40.5 2.4 2.2 2 0 0 2 2 2 2 Outer membrane efflux protein Chloroa_b-bind PF00504.21 ORF39998 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF39998 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF39998 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF39998 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF39998 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF39998 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain DUF1180 PF06679.12 ORF38097 - 0.026 15.0 0.3 0.048 14.1 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Baculo_11_kDa PF06143.11 ORF38097 - 0.05 13.2 2.6 0.068 12.8 1.4 1.8 2 0 0 2 2 2 0 Baculovirus 11 kDa family SieB PF14163.6 ORF38097 - 0.26 10.8 2.7 1.3 8.5 0.8 2.3 2 0 0 2 2 2 0 Super-infection exclusion protein B SK_channel PF03530.14 ORF38097 - 0.38 10.7 4.9 0.53 10.3 1.7 2.6 2 0 0 2 2 2 0 Calcium-activated SK potassium channel DUF3021 PF11457.8 ORF38097 - 6.7 7.1 9.5 0.11 12.9 1.1 2.2 3 1 0 3 3 3 0 Protein of unknown function (DUF3021) Chloroa_b-bind PF00504.21 ORF32110 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF32110 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF32110 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF32110 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF32110 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF32110 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Pepsin-I3 PF06394.13 ORF30257 - 0.035 14.3 4.9 0.1 12.8 0.4 3.2 3 0 0 3 3 3 0 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF30257 - 3.9 7.9 11.4 0.83 10.0 0.2 3.7 3 2 1 4 4 4 0 HalX domain Ank PF00023.30 ORF27405 - 3.2e-05 24.2 0.1 0.062 13.8 0.0 3.6 3 0 0 3 3 3 1 Ankyrin repeat Ank_2 PF12796.7 ORF27405 - 0.00028 21.4 0.0 0.0032 18.0 0.0 2.5 1 1 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF27405 - 0.00049 20.6 0.2 0.063 13.9 0.2 3.0 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF27405 - 0.0026 18.1 0.2 0.1 13.2 0.0 3.0 2 0 0 2 2 2 1 Ankyrin repeat Chloroa_b-bind PF00504.21 ORF27279 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF27279 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF27279 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF27279 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF27279 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF27279 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Ost4 PF10215.9 ORF24803 - 0.2 11.5 0.1 0.36 10.7 0.1 1.4 1 0 0 1 1 1 0 Oligosaccaryltransferase Acyl-CoA_dh_M PF02770.19 ORF13497 - 9.4e-12 45.0 0.0 1.5e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_ox_N PF14749.6 ORF13497 - 7.3e-11 42.7 0.1 1.5e-10 41.7 0.1 1.5 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Chloroa_b-bind PF00504.21 ORF112263 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF112263 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF112263 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF112263 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF112263 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF112263 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain PIEZO PF15917.5 ORF105099 - 0.37 10.2 0.0 0.37 10.2 0.0 3.0 1 1 2 3 3 3 0 Piezo Chloroa_b-bind PF00504.21 ORF104007 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF104007 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF104007 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF104007 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF104007 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF104007 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Ost4 PF10215.9 ORF103751 - 0.2 11.5 0.1 0.36 10.7 0.1 1.4 1 0 0 1 1 1 0 Oligosaccaryltransferase ABC_membrane PF00664.23 NODE_15638_length_1124_cov_73.924702_g11821_i0forward_frame_1 - 8.2e-36 124.1 2.5 1.1e-35 123.6 2.5 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region BTB PF00651.31 ORF92179 - 3.3e-23 82.0 2.7 9.3e-22 77.4 0.1 2.4 1 1 1 2 2 2 2 BTB/POZ domain Actin PF00022.19 ORF85755 - 2.1e-141 471.2 0.0 1.1e-140 468.8 0.0 1.8 1 1 0 1 1 1 1 Actin DUF3659 PF12396.8 ORF81472 - 0.026 14.5 1.4 0.028 14.3 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) Exo_endo_phos PF03372.23 ORF8038 - 3.6e-12 46.3 0.0 1.2e-11 44.5 0.0 1.9 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Actin PF00022.19 ORF79985 - 1.4e-141 471.8 0.0 5.7e-141 469.8 0.0 1.7 1 1 0 1 1 1 1 Actin AMP-binding PF00501.28 ORF78117 - 1.2e-19 70.2 0.0 2.8e-19 69.0 0.0 1.5 1 1 0 1 1 1 1 AMP-binding enzyme Peptidase_C1 PF00112.23 ORF72963 - 2.7e-53 181.3 11.8 4.7e-53 180.5 11.8 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF72963 - 4.9e-16 58.9 8.3 6.4e-16 58.5 4.9 2.6 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF2140 PF09911.9 ORF72963 - 0.41 10.2 3.7 0.096 12.2 0.4 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) Actin PF00022.19 ORF67343 - 2.1e-141 471.2 0.0 1.1e-140 468.8 0.0 1.8 1 1 0 1 1 1 1 Actin Xan_ur_permease PF00860.20 ORF64971 - 9.6e-73 245.1 38.9 1.3e-72 244.7 38.9 1.1 1 0 0 1 1 1 1 Permease family AcrZ PF10766.9 ORF64971 - 0.12 11.9 0.2 0.12 11.9 0.2 3.9 4 0 0 4 4 4 0 Multidrug efflux pump-associated protein AcrZ MFS_MOT1 PF16983.5 ORF64971 - 6.1 7.3 36.5 0.12 12.8 5.8 4.3 2 1 2 4 4 4 0 Molybdate transporter of MFS superfamily DUF3333 PF11812.8 ORF64971 - 8.6 6.6 5.6 2 8.6 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3333) Exonuc_VII_L PF02601.15 ORF63638 - 0.051 13.1 9.7 0.08 12.5 9.7 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit LMBR1 PF04791.16 ORF63638 - 0.21 10.5 2.7 0.24 10.3 2.7 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein Mit_ribos_Mrp51 PF11709.8 ORF63638 - 0.59 9.7 5.8 0.82 9.2 5.8 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit FapA PF03961.13 ORF63638 - 0.63 8.6 15.4 1.1 7.8 15.4 1.4 1 0 0 1 1 1 0 Flagellar Assembly Protein A ATP11 PF06644.11 ORF63638 - 0.72 9.6 12.6 1.1 9.0 12.6 1.3 1 0 0 1 1 1 0 ATP11 protein Golgin_A5 PF09787.9 ORF63638 - 1.4 8.3 21.5 0.34 10.3 18.3 1.5 2 0 0 2 2 2 0 Golgin subfamily A member 5 DUF4407 PF14362.6 ORF63638 - 6.6 6.0 9.1 11 5.3 9.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF883 PF05957.13 ORF63638 - 7.2 7.3 6.9 10 6.8 4.6 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Vfa1 PF08432.10 ORF63638 - 9.1 6.6 18.2 16 5.7 18.2 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Kelch_5 PF13854.6 ORF62062 - 3.5e-09 36.4 0.6 0.58 10.2 0.0 5.6 5 1 0 5 5 5 3 Kelch motif Kelch_2 PF07646.15 ORF62062 - 6.8e-09 35.3 2.2 0.051 13.6 0.0 6.4 6 2 0 6 6 6 1 Kelch motif Kelch_1 PF01344.25 ORF62062 - 2.1e-08 33.6 2.4 0.016 14.8 0.0 6.1 6 0 0 6 6 6 2 Kelch motif Kelch_3 PF13415.6 ORF62062 - 2.8e-06 27.5 9.7 0.038 14.3 0.3 5.5 5 1 1 6 6 6 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF62062 - 0.00022 21.4 0.2 5 7.6 0.0 5.0 5 1 0 5 5 5 1 Kelch motif Kelch_4 PF13418.6 ORF62062 - 0.012 15.7 8.5 4.5 7.4 0.0 5.8 6 2 0 6 6 6 0 Galactose oxidase, central domain FAP206 PF12018.8 ORF56985 - 2.7e-71 240.3 1.2 3.7e-71 239.9 1.2 1.2 1 0 0 1 1 1 1 Domain of unknown function Prok-JAB PF14464.6 ORF54412 - 0.054 13.3 0.1 0.12 12.2 0.1 1.5 1 0 0 1 1 1 0 Prokaryotic homologs of the JAB domain DUF3042 PF11240.8 ORF54412 - 0.063 13.3 0.1 0.16 12.0 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3042) EphA2_TM PF14575.6 ORF54412 - 0.14 13.0 0.3 0.41 11.5 0.3 2.0 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain LRR_6 PF13516.6 ORF51967 - 0.0071 16.3 12.6 0.14 12.3 0.1 4.4 4 0 0 4 4 4 2 Leucine Rich repeat LRR_1 PF00560.33 ORF51967 - 0.018 15.5 1.1 1.2 9.9 0.1 3.6 3 0 0 3 3 3 0 Leucine Rich Repeat LRR_4 PF12799.7 ORF51967 - 0.13 12.8 12.1 6.1 7.4 0.5 3.3 1 1 2 3 3 3 0 Leucine Rich repeats (2 copies) Ctr PF04145.15 ORF51967 - 1 10.0 7.1 1.8 9.1 0.6 2.4 2 0 0 2 2 2 0 Ctr copper transporter family Sulfotransfer_2 PF03567.14 ORF50715 - 0.019 14.9 0.6 0.029 14.3 0.6 1.3 1 0 0 1 1 1 0 Sulfotransferase family Actin PF00022.19 ORF49539 - 2.1e-141 471.2 0.0 1.1e-140 468.8 0.0 1.8 1 1 0 1 1 1 1 Actin Sulfotransfer_2 PF03567.14 ORF45933 - 0.019 14.9 0.6 0.029 14.3 0.6 1.3 1 0 0 1 1 1 0 Sulfotransferase family TryThrA_C PF12319.8 ORF45214 - 0.0039 16.7 1.9 0.0096 15.4 1.9 1.6 1 0 0 1 1 1 1 Tryptophan-Threonine-rich plasmodium antigen C terminal DUF1664 PF07889.12 ORF45214 - 0.0093 16.0 1.7 0.0093 16.0 1.7 4.2 2 1 3 5 5 5 1 Protein of unknown function (DUF1664) DUF692 PF05114.13 ORF45214 - 0.023 13.9 1.4 0.42 9.8 0.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF692) DUF1699 PF08004.11 ORF45214 - 0.046 13.4 2.6 0.69 9.6 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1699) Acyl_transf_2 PF02273.15 ORF45214 - 0.072 12.3 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 Acyl transferase DUF3037 PF11236.8 ORF45214 - 0.11 13.0 0.3 0.11 13.0 0.3 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF3037) NPV_P10 PF05531.12 ORF45214 - 0.11 13.0 8.5 7.8 7.1 0.1 5.3 3 3 1 4 4 4 0 Nucleopolyhedrovirus P10 protein Bep_C_terminal PF17841.1 ORF45214 - 0.12 12.6 3.7 3.3 8.0 0.3 3.1 3 0 0 3 3 3 0 BID domain of Bartonella effector protein (Bep) FlaC_arch PF05377.11 ORF45214 - 0.15 12.4 0.2 0.15 12.4 0.2 5.2 5 1 1 6 6 6 0 Flagella accessory protein C (FlaC) MatP PF06303.12 ORF45214 - 0.22 12.1 3.0 0.26 11.8 0.6 2.5 2 0 0 2 2 2 0 MatP N-terminal domain DUF3287 PF11690.8 ORF45214 - 0.37 10.5 4.5 10 5.8 2.0 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3287) EzrA PF06160.12 ORF45214 - 0.43 8.7 14.1 0.013 13.7 5.2 2.3 1 1 0 2 2 2 0 Septation ring formation regulator, EzrA HlyD_2 PF12700.7 ORF45214 - 0.81 8.4 5.4 0.45 9.2 1.7 2.0 2 0 0 2 2 2 0 HlyD family secretion protein Sipho_Gp157 PF05565.11 ORF45214 - 1.2 9.2 14.0 0.32 11.0 1.4 3.6 3 1 1 4 4 4 0 Siphovirus Gp157 Fzo_mitofusin PF04799.13 ORF45214 - 2.2 7.8 27.6 0.87 9.1 1.2 5.7 2 2 4 6 6 6 0 fzo-like conserved region FPP PF05911.11 ORF45214 - 3.7 5.6 37.5 0.045 11.9 13.9 2.2 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil Peptidase_C1 PF00112.23 ORF42264 - 2.7e-53 181.3 11.8 4.7e-53 180.5 11.8 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF42264 - 4.9e-16 58.9 8.3 6.4e-16 58.5 4.9 2.6 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF2140 PF09911.9 ORF42264 - 0.41 10.2 3.7 0.096 12.2 0.4 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) Peptidase_M20 PF01546.28 ORF38174 - 1.6e-43 148.9 0.1 1.9e-43 148.6 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF38174 - 1.6e-25 89.1 0.1 3.9e-25 87.9 0.0 1.7 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 ORF38174 - 0.0052 16.5 0.0 0.036 13.7 0.0 2.0 2 0 0 2 2 2 1 Peptidase family M28 Peptidase_M18 PF02127.15 ORF38174 - 0.048 12.4 0.0 0.078 11.7 0.0 1.2 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) His_Phos_2 PF00328.22 ORF36470 - 1.6e-12 47.5 13.9 2.3e-12 47.0 5.8 2.9 2 1 0 2 2 2 1 Histidine phosphatase superfamily (branch 2) EF-hand_7 PF13499.6 ORF34665 - 5.7e-06 26.7 0.0 0.005 17.3 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF34665 - 0.0016 18.2 0.0 26 5.1 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF34665 - 0.2 11.3 0.0 3.6 7.3 0.0 2.8 3 0 0 3 3 3 0 EF hand CCD48 PF15799.5 ORF34665 - 0.22 9.8 2.1 0.42 8.9 0.0 2.1 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 48 Exo_endo_phos PF03372.23 ORF31886 - 3.6e-12 46.3 0.0 1.2e-11 44.5 0.0 1.9 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Sulfotransfer_2 PF03567.14 ORF28276 - 0.019 14.9 0.6 0.029 14.3 0.6 1.3 1 0 0 1 1 1 0 Sulfotransferase family KIAA1430 PF13879.6 ORF27538 - 3.4e-15 56.6 7.3 3.4e-15 56.6 7.3 2.3 3 0 0 3 3 3 1 KIAA1430 homologue Spc24 PF08286.11 ORF27538 - 0.13 12.5 12.5 0.095 13.0 0.7 3.3 3 0 0 3 3 3 0 Spc24 subunit of Ndc80 RPAP1_N PF08621.10 ORF27538 - 0.15 11.9 9.7 1.5 8.7 0.4 3.6 3 1 1 4 4 4 0 RPAP1-like, N-terminal Sof1 PF04158.14 ORF25895 - 1.8e-28 98.6 15.7 2.8e-28 98.0 15.7 1.3 1 0 0 1 1 1 1 Sof1-like domain WD40 PF00400.32 ORF25895 - 2.2e-22 78.9 2.0 1.2e-05 25.9 0.0 5.3 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF25895 - 0.0012 19.1 0.0 1.4 9.3 0.0 3.4 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF25895 - 0.0069 16.3 0.0 0.27 11.1 0.0 2.8 2 1 1 3 3 3 2 Eukaryotic translation initiation factor eIF2A DUF3915 PF13054.6 ORF25895 - 0.27 11.2 0.0 0.27 11.2 0.0 2.4 3 1 0 3 3 3 0 Protein of unknown function (DUF3915) DNA_pol_viral_C PF00336.18 ORF23916 - 0.0027 17.1 0.0 0.012 15.0 0.0 2.0 2 0 0 2 2 2 1 DNA polymerase (viral) C-terminal domain Aminotran_1_2 PF00155.21 ORF17622 - 3.1e-22 79.3 0.0 4e-22 78.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 ORF17622 - 0.00012 21.5 0.4 0.0037 16.6 0.6 2.6 2 1 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_MocR PF12897.7 ORF17622 - 0.15 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Actin PF00022.19 ORF15643 - 2.1e-141 471.2 0.0 1.1e-140 468.8 0.0 1.8 1 1 0 1 1 1 1 Actin His_Phos_2 PF00328.22 ORF14838 - 3.3e-12 46.5 14.7 1.1e-11 44.8 6.6 2.9 2 1 0 2 2 2 1 Histidine phosphatase superfamily (branch 2) Peptidase_C1 PF00112.23 ORF14469 - 2.7e-53 181.3 11.8 4.7e-53 180.5 11.8 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF14469 - 4.9e-16 58.9 8.3 6.4e-16 58.5 4.9 2.6 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF2140 PF09911.9 ORF14469 - 0.41 10.2 3.7 0.096 12.2 0.4 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) Adap_comp_sub PF00928.21 ORF13221 - 2e-61 207.7 0.6 2.6e-61 207.3 0.6 1.1 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Deltaretro_Tax PF05599.11 ORF13221 - 0.15 12.6 0.0 0.35 11.4 0.0 1.5 1 0 0 1 1 1 0 Deltaretrovirus Tax protein PPR_3 PF13812.6 ORF111103 - 2.3e-08 34.0 0.0 0.00078 19.5 0.0 3.8 5 0 0 5 5 5 2 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF111103 - 2.6e-07 30.2 0.0 0.0032 16.9 0.0 2.3 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_2 PF13041.6 ORF111103 - 3.4e-07 30.3 0.0 0.054 13.7 0.0 4.3 3 1 2 5 5 5 3 PPR repeat family PPR PF01535.20 ORF111103 - 0.0097 16.1 5.5 8.1 6.9 0.0 4.6 5 0 0 5 5 5 2 PPR repeat Amidase_3 PF01520.18 ORF111103 - 0.014 15.5 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase CUE PF02845.16 ORF108934 - 0.027 14.2 1.2 0.27 11.0 0.2 2.8 3 0 0 3 3 3 0 CUE domain His_Phos_2 PF00328.22 ORF108638 - 2.5e-12 46.9 14.3 7.3e-11 42.0 0.1 3.0 2 1 1 3 3 3 2 Histidine phosphatase superfamily (branch 2) IRK_C PF17655.1 ORF108638 - 0.031 13.9 0.0 0.061 12.9 0.0 1.5 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain PAP_central PF04928.17 ORF10729 - 5.5e-82 274.5 0.1 8.1e-82 273.9 0.1 1.2 1 0 0 1 1 1 1 Poly(A) polymerase central domain PAP_RNA-bind PF04926.15 ORF10729 - 1.5e-20 73.5 0.0 5.6e-14 52.1 0.0 2.4 1 1 1 2 2 2 2 Poly(A) polymerase predicted RNA binding domain Nrap_D2 PF17403.2 ORF10729 - 9.7e-05 22.2 0.0 0.0002 21.1 0.0 1.5 1 0 0 1 1 1 1 Nrap protein PAP/OAS-like domain DUF2240 PF09999.9 ORF10729 - 0.11 12.1 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) LRR_6 PF13516.6 ORF104128 - 0.0071 16.3 12.6 0.14 12.3 0.1 4.4 4 0 0 4 4 4 2 Leucine Rich repeat LRR_1 PF00560.33 ORF104128 - 0.018 15.5 1.1 1.2 9.9 0.1 3.6 3 0 0 3 3 3 0 Leucine Rich Repeat LRR_4 PF12799.7 ORF104128 - 0.13 12.8 12.1 6.1 7.4 0.5 3.3 1 1 2 3 3 3 0 Leucine Rich repeats (2 copies) Ctr PF04145.15 ORF104128 - 1 10.0 7.1 1.8 9.1 0.6 2.4 2 0 0 2 2 2 0 Ctr copper transporter family HlyD_2 PF12700.7 ORF103947 - 0.0051 15.6 13.8 0.0064 15.3 13.8 1.2 1 0 0 1 1 1 1 HlyD family secretion protein Exonuc_VII_L PF02601.15 ORF103947 - 0.052 13.1 11.6 0.079 12.5 11.6 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Mit_ribos_Mrp51 PF11709.8 ORF103947 - 0.23 11.0 7.1 0.31 10.6 7.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit UPF0242 PF06785.11 ORF103947 - 0.25 11.4 19.1 0.45 10.6 19.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2362 PF10154.9 ORF103947 - 0.29 10.0 14.1 0.42 9.5 14.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2362) ATP11 PF06644.11 ORF103947 - 1 9.1 14.5 1.6 8.5 14.5 1.3 1 0 0 1 1 1 0 ATP11 protein DUF99 PF01949.16 ORF103947 - 1.2 8.5 3.3 2.9 7.3 0.6 2.3 2 1 0 2 2 2 0 Protein of unknown function DUF99 FapA PF03961.13 ORF103947 - 3.1 6.3 15.8 5.5 5.5 15.8 1.4 1 0 0 1 1 1 0 Flagellar Assembly Protein A HSP70 PF00012.20 ORF103947 - 5 5.2 13.2 7.2 4.6 13.2 1.2 1 0 0 1 1 1 0 Hsp70 protein DUF1664 PF07889.12 ORF103947 - 6.9 6.7 12.2 1.6e+02 2.3 2.3 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Selenoprotein_S PF06936.11 ORF103947 - 7.5 6.3 13.5 12 5.6 13.5 1.3 1 0 0 1 1 1 0 Selenoprotein S (SelS) GvpL_GvpF PF06386.11 ORF103947 - 8.9 6.2 8.9 15 5.4 8.9 1.3 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF MscS_porin PF12795.7 ORF101983 - 0.0025 17.4 14.1 0.0025 17.4 14.1 3.2 3 1 0 3 3 3 1 Mechanosensitive ion channel porin domain DUF2735 PF10931.8 ORF101983 - 0.99 10.1 5.9 3.9 8.2 0.4 3.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2735) Strep_SA_rep PF06696.11 ORF101983 - 2.1 8.5 18.3 0.1 12.6 1.4 4.3 3 1 1 4 4 4 0 Streptococcal surface antigen repeat FAD_binding_2 PF00890.24 ORF100583 - 1.5e-45 156.1 0.0 1.9e-45 155.7 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 ORF100583 - 0.081 12.2 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 Thi4 family TPR_11 PF13414.6 NODE_15668_length_1123_cov_2.329963_g11844_i0reverse_frame_3 - 0.38 10.5 0.1 0.38 10.5 0.1 3.0 3 0 0 3 3 3 0 TPR repeat TPR_2 PF07719.17 NODE_15668_length_1123_cov_2.329963_g11844_i0reverse_frame_3 - 2.3 8.6 4.6 0.77 10.0 0.1 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_15668_length_1123_cov_2.329963_g11844_i0reverse_frame_2 - 2.8e-05 24.3 0.1 0.00013 22.1 0.1 2.0 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 DUF1039 PF06287.11 NODE_15668_length_1123_cov_2.329963_g11844_i0reverse_frame_2 - 0.17 12.3 0.0 0.35 11.3 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1039) Pkinase PF00069.25 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 7.7e-39 133.6 0.0 1.4e-38 132.8 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 7.9e-18 64.7 0.0 1.3e-17 64.0 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Cyclin_N PF00134.23 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 2.8e-08 33.5 0.1 6e-08 32.5 0.1 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain Haspin_kinase PF12330.8 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 0.00067 18.7 0.0 0.0012 17.9 0.0 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 0.0051 16.2 0.0 0.007 15.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 0.032 13.6 0.0 0.055 12.8 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 0.18 11.7 0.0 0.31 10.9 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family TPR_MLP1_2 PF07926.12 NODE_15647_length_1123_cov_1329.482537_g11828_i0reverse_frame_3 - 0.00027 21.0 26.6 0.00027 21.0 26.6 4.4 1 1 3 4 4 4 1 TPR/MLP1/MLP2-like protein IL28A PF15177.6 NODE_15647_length_1123_cov_1329.482537_g11828_i0reverse_frame_3 - 0.019 14.8 1.5 0.019 14.8 1.5 2.6 2 1 0 2 2 2 0 Interleukin-28A HalX PF08663.10 NODE_15647_length_1123_cov_1329.482537_g11828_i0reverse_frame_3 - 0.032 14.5 1.1 0.032 14.5 1.1 5.2 5 1 1 6 6 6 0 HalX domain PRT_C PF08372.10 NODE_15638_length_1124_cov_73.924702_g11821_i0reverse_frame_3 - 0.27 11.0 1.9 0.59 9.9 1.9 1.5 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal DUF3346 PF11826.8 NODE_15638_length_1124_cov_73.924702_g11821_i0forward_frame_2 - 0.0076 16.1 0.2 0.012 15.4 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3346) Asp PF00026.23 NODE_15577_length_1125_cov_1157.732110_g11766_i0reverse_frame_3 - 4.3e-36 124.9 1.6 5.5e-36 124.6 1.6 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_15577_length_1125_cov_1157.732110_g11766_i0reverse_frame_3 - 6.2e-06 26.6 1.3 3.6e-05 24.1 0.1 2.4 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 NODE_15577_length_1125_cov_1157.732110_g11766_i0reverse_frame_3 - 0.056 13.1 0.0 0.096 12.3 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Asp PF00026.23 ORF88646 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF88646 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF88646 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal TMEM131_like PF12371.8 ORF84699 - 2.4e-06 27.7 1.1 4.3e-06 26.9 0.1 2.0 2 0 0 2 2 2 1 Transmembrane protein 131-like ASH PF15780.5 ORF84699 - 0.021 15.0 0.1 0.066 13.4 0.1 1.8 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Asp PF00026.23 ORF77469 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF77469 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF77469 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Hist_deacetyl PF00850.19 ORF76434 - 9.7e-22 77.8 0.0 1.2e-21 77.5 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Ntox21 PF15526.6 ORF76434 - 0.13 12.6 0.1 0.32 11.3 0.1 1.6 1 0 0 1 1 1 0 Novel toxin 21 AAT PF03417.16 ORF72247 - 9.9e-06 25.4 0.0 1.4e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Glyco_hydro_31 PF01055.26 ORF69674 - 3.9e-63 214.2 1.0 3.9e-63 214.2 1.0 1.6 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF69674 - 0.0019 18.5 0.2 0.0051 17.0 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Ion_trans PF00520.31 ORF64678 - 1.9e-26 92.8 10.7 2.6e-26 92.4 10.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF64678 - 2.7e-10 39.0 2.3 2.5e-06 26.6 0.0 3.1 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF64678 - 1.1e-08 34.8 0.9 4.4e-05 23.2 0.0 3.5 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF64678 - 1.1e-07 31.1 0.1 0.00089 19.0 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF64678 - 2e-06 28.1 1.0 5.8e-05 23.5 0.0 2.6 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF64678 - 0.078 12.5 0.8 0.7 9.5 0.0 2.6 2 0 0 2 2 2 0 EF hand Asp PF00026.23 ORF64147 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF64147 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF64147 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal DHC_N1 PF08385.12 ORF60319 - 1.3e-12 47.1 1.7 1.3e-12 47.1 1.7 2.0 3 0 0 3 3 3 1 Dynein heavy chain, N-terminal region 1 Ala_racemase_N PF01168.20 ORF58021 - 2.3e-19 69.9 0.0 3.2e-19 69.5 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain D-ser_dehydrat PF14031.6 ORF58021 - 1.6e-13 51.2 0.0 3.8e-13 49.9 0.0 1.7 1 0 0 1 1 1 1 Putative serine dehydratase domain MFS_1 PF07690.16 ORF51639 - 5.2e-21 75.0 52.5 1.9e-19 69.8 25.9 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF51639 - 0.00028 19.9 6.0 0.00028 19.9 6.0 1.8 2 1 0 2 2 2 1 Sugar (and other) transporter Tail_VII PF17091.5 ORF51639 - 0.2 11.6 3.9 0.86 9.5 3.9 2.1 1 0 0 1 1 1 0 Inovirus G7P protein Asp PF00026.23 ORF46946 - 1.5e-80 271.0 7.3 1.9e-80 270.6 7.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF46946 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF46946 - 2.9e-05 23.9 0.0 0.0001 22.1 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Epimerase PF01370.21 ORF43924 - 2.4e-22 79.6 0.0 3.6e-22 79.0 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF43924 - 1e-11 44.9 0.0 1.7e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 ORF43924 - 2.2e-11 43.3 0.0 3e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 ORF43924 - 1.1e-10 41.2 0.0 4.3e-09 35.9 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.25 ORF43924 - 1.2e-07 31.4 0.0 2.7e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 short chain dehydrogenase NmrA PF05368.13 ORF43924 - 4e-07 29.8 0.0 1.6e-06 27.9 0.0 1.9 2 0 0 2 2 2 1 NmrA-like family RmlD_sub_bind PF04321.17 ORF43924 - 5.1e-07 29.1 0.0 6.2e-06 25.5 0.0 2.2 2 0 0 2 2 2 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 ORF43924 - 1e-06 28.8 0.2 2.7e-06 27.4 0.0 1.7 2 0 0 2 2 2 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF43924 - 2e-05 23.9 0.0 2.9e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF43924 - 0.00027 20.9 0.0 0.00076 19.4 0.0 1.7 1 1 0 1 1 1 1 KR domain Asp PF00026.23 ORF42995 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF42995 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF42995 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal MFS_1 PF07690.16 ORF40897 - 5.2e-21 75.0 52.5 1.9e-19 69.8 25.9 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF40897 - 0.00028 19.9 6.0 0.00028 19.9 6.0 1.8 2 1 0 2 2 2 1 Sugar (and other) transporter Tail_VII PF17091.5 ORF40897 - 0.2 11.6 3.9 0.86 9.5 3.9 2.1 1 0 0 1 1 1 0 Inovirus G7P protein Solute_trans_a PF03619.16 ORF32096 - 4.4e-10 39.5 10.2 6.9e-10 38.9 10.2 1.3 1 0 0 1 1 1 1 Organic solute transporter Ostalpha Asp PF00026.23 ORF31789 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF31789 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF31789 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal PepSY_TM PF03929.16 ORF30985 - 0.0048 16.6 5.2 0.0073 16.0 5.2 1.2 1 0 0 1 1 1 1 PepSY-associated TM region Dynamitin PF04912.14 ORF28388 - 1e-25 90.9 23.3 1.4e-25 90.4 23.3 1.3 1 0 0 1 1 1 1 Dynamitin Occludin_ELL PF07303.13 ORF28388 - 0.89 10.3 15.8 8.5 7.2 1.7 4.4 3 2 0 3 3 3 0 Occludin homology domain Uds1 PF15456.6 ORF28388 - 1.7 8.9 16.6 23 5.2 13.4 3.5 1 1 0 2 2 2 0 Up-regulated During Septation AAA PF00004.29 ORF24087 - 3.3e-14 53.4 0.0 7.3e-13 49.1 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF24087 - 2.5e-05 24.7 3.0 8.8e-05 22.9 0.0 2.7 2 1 1 3 3 3 1 AAA ATPase domain AAA_22 PF13401.6 ORF24087 - 0.00031 21.0 0.1 0.032 14.5 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF24087 - 0.0071 16.4 0.0 0.012 15.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) KAP_NTPase PF07693.14 ORF24087 - 0.016 14.4 0.0 0.026 13.7 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain ABC_tran PF00005.27 ORF24087 - 0.02 15.4 0.0 0.041 14.4 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_28 PF13521.6 ORF24087 - 0.022 15.0 0.0 0.051 13.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 ORF24087 - 0.023 14.6 0.2 0.18 11.7 0.0 2.3 2 0 0 2 2 2 0 NACHT domain AAA_30 PF13604.6 ORF24087 - 0.083 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF24087 - 0.094 13.3 0.0 0.15 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 ORF24087 - 0.1 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_33 PF13671.6 ORF24087 - 0.17 12.1 0.0 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 ORF24087 - 0.18 12.1 0.0 0.35 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF24087 - 0.21 10.8 0.1 0.35 10.1 0.1 1.2 1 0 0 1 1 1 0 Zeta toxin SMC_N PF02463.19 ORF24087 - 0.22 11.0 0.0 0.36 10.2 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain PqiA PF04403.13 ORF20463 - 0.0042 16.9 16.2 0.04 13.8 2.5 3.1 2 1 1 3 3 3 3 Paraquat-inducible protein A Pirin PF02678.16 ORF1985 - 1.8e-19 69.7 0.7 5.9e-19 68.0 0.7 1.8 1 1 0 1 1 1 1 Pirin Pirin_C PF05726.13 ORF1985 - 2.5e-17 63.1 0.0 9.8e-17 61.2 0.0 1.9 2 0 0 2 2 2 1 Pirin C-terminal cupin domain DUF3626 PF12294.8 ORF18391 - 2.8e-24 85.7 0.0 1.2e-15 57.4 0.1 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF3626) SEC-C PF02810.15 ORF18391 - 0.00044 20.1 4.9 2.5 8.1 0.0 4.0 3 0 0 3 3 3 2 SEC-C motif LPD7 PF18821.1 ORF18391 - 0.064 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 7 zf-C2HC_2 PF13913.6 ORF18391 - 0.43 10.5 9.4 1.6 8.7 0.5 3.9 3 0 0 3 3 3 0 zinc-finger of a C2HC-type Asparaginase PF00710.20 NODE_15813_length_1117_cov_2.235675_g11969_i0forward_frame_1 - 1.1e-66 224.1 0.0 1.5e-66 223.6 0.0 1.1 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 NODE_15813_length_1117_cov_2.235675_g11969_i0forward_frame_1 - 6.7e-15 55.3 0.0 1.1e-14 54.6 0.0 1.4 1 0 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain Endothelin PF00322.17 NODE_15813_length_1117_cov_2.235675_g11969_i0forward_frame_1 - 1.6 8.4 4.1 0.82 9.3 1.0 2.0 2 0 0 2 2 2 0 Endothelin family DUF4164 PF13747.6 NODE_15741_length_1119_cov_942.139299_g11907_i0reverse_frame_1 - 2.2e-05 24.7 7.7 0.025 14.8 5.2 3.1 2 1 1 3 3 3 2 Domain of unknown function (DUF4164) Ca_chan_IQ PF08763.11 NODE_15741_length_1119_cov_942.139299_g11907_i0reverse_frame_1 - 0.11 12.7 3.2 0.27 11.5 0.2 2.9 1 1 1 2 2 2 0 Voltage gated calcium channel IQ domain NUC194 PF08163.12 NODE_15688_length_1122_cov_4.518859_g11861_i0forward_frame_2 - 0.0052 15.8 10.3 0.0092 15.0 10.3 1.3 1 0 0 1 1 1 1 NUC194 domain DUF5318 PF17249.2 NODE_15688_length_1122_cov_4.518859_g11861_i0forward_frame_2 - 0.08 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5318) BCDHK_Adom3 PF10436.9 ORF95431 - 1.7e-15 57.2 0.0 2.6e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase HATPase_c PF02518.26 ORF95431 - 1.4e-10 41.7 0.0 2.4e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF95431 - 0.016 15.1 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FliT PF05400.13 ORF95431 - 0.022 15.6 0.0 0.041 14.7 0.0 1.4 1 0 0 1 1 1 0 Flagellar protein FliT Spc7 PF08317.11 ORF92001 - 0.0059 15.5 31.0 0.063 12.1 11.7 2.4 1 1 1 2 2 2 2 Spc7 kinetochore protein Fib_alpha PF08702.10 ORF92001 - 0.029 14.6 1.4 0.029 14.6 1.4 3.1 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family zf-C2H2_2 PF12756.7 ORF92001 - 0.077 13.3 6.2 0.12 12.7 0.6 2.5 2 0 0 2 2 2 0 C2H2 type zinc-finger (2 copies) UCH PF00443.29 ORF92001 - 0.083 12.4 0.4 0.19 11.2 0.4 1.9 1 1 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase QueF PF14489.6 ORF92001 - 0.087 13.0 0.6 0.23 11.7 0.1 2.1 2 1 0 2 2 2 0 QueF-like protein DUF4413 PF14372.6 ORF92001 - 0.12 12.7 0.5 5.7 7.4 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4413) SseC PF04888.12 ORF92001 - 0.31 10.6 9.7 0.24 11.0 8.6 1.4 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family HAP1_N PF04849.13 ORF92001 - 1.9 7.6 34.5 0.21 10.8 24.8 2.8 1 1 2 3 3 3 0 HAP1 N-terminal conserved region CENP-F_leu_zip PF10473.9 ORF92001 - 4.4 7.3 35.1 0.15 12.1 17.5 3.3 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1835 PF08874.10 ORF92001 - 6.4 7.0 8.7 4.8 7.4 4.5 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1835) HalX PF08663.10 ORF92001 - 7.3 7.0 14.0 0.83 10.0 3.6 3.4 3 0 0 3 3 3 0 HalX domain Filament PF00038.21 ORF92001 - 7.8 6.0 38.0 96 2.4 37.8 2.4 1 1 0 1 1 1 0 Intermediate filament protein Enkurin PF13864.6 ORF83605 - 0.011 16.1 9.5 0.12 12.8 1.7 3.4 3 0 0 3 3 3 0 Calmodulin-binding HALZ PF02183.18 ORF83605 - 0.57 10.4 11.4 0.26 11.5 0.6 4.0 3 1 0 3 3 3 0 Homeobox associated leucine zipper Cep57_MT_bd PF06657.13 ORF83605 - 0.92 10.0 13.0 1.5 9.3 0.3 3.3 3 0 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 BST2 PF16716.5 ORF83605 - 4.2 8.0 13.9 7.8 7.2 6.9 2.8 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 YabA PF06156.13 ORF83605 - 6.6 7.4 14.0 0.27 11.9 1.2 2.8 2 1 0 2 2 2 0 Initiation control protein YabA Sulfatase PF00884.23 ORF8124 - 1.8e-23 83.4 0.1 4.1e-23 82.2 0.0 1.6 2 0 0 2 2 2 1 Sulfatase DUF4994 PF16385.5 ORF8124 - 4.1e-05 23.4 0.0 0.0001 22.1 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function Sulfatase_C PF14707.6 ORF8124 - 0.00015 22.4 0.0 0.00026 21.7 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of aryl-sulfatase DUF4976 PF16347.5 ORF8124 - 0.00017 21.8 0.0 0.00032 20.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4976) DUF229 PF02995.17 ORF8124 - 0.004 15.8 0.0 0.0065 15.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Metalloenzyme PF01676.18 ORF8124 - 0.0081 15.6 0.0 0.022 14.1 0.0 1.7 2 0 0 2 2 2 1 Metalloenzyme superfamily Phosphodiest PF01663.22 ORF8124 - 0.11 12.1 0.2 4.4 6.8 0.0 2.1 2 0 0 2 2 2 0 Type I phosphodiesterase / nucleotide pyrophosphatase Tymo_45kd_70kd PF03251.13 ORF69507 - 0.0036 16.3 1.0 0.0062 15.6 1.0 1.3 1 0 0 1 1 1 1 Tymovirus 45/70Kd protein DUF968 PF06147.11 ORF69507 - 0.011 16.0 0.0 0.02 15.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF968) Prok-RING_4 PF14447.6 ORF69507 - 0.67 9.9 0.1 0.67 9.9 0.1 3.0 3 1 0 3 3 3 0 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF69507 - 1.5 8.9 7.5 1.6 8.7 1.4 2.9 2 2 0 2 2 2 0 zinc-RING finger domain SRP_SPB PF02978.19 ORF69507 - 1.7 9.4 3.8 3.3 8.4 3.8 1.5 1 0 0 1 1 1 0 Signal peptide binding domain zf-C4_ClpX PF06689.13 ORF69507 - 4.5 7.3 8.6 51 3.9 3.6 3.4 2 1 0 2 2 2 0 ClpX C4-type zinc finger IBR PF01485.21 ORF69507 - 6.9 7.0 11.7 9.7 6.5 3.3 2.8 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks32.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks32.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks32.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks32.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:31 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PhaG_MnhG_YufB PF03334.14 NODE_70446_length_224_cov_2.830688_g62505_i0reverse_frame_2 - 0.053 13.8 0.2 0.14 12.4 0.0 1.8 1 1 0 1 1 1 0 Na+/H+ antiporter subunit EF-hand_7 PF13499.6 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.00043 20.7 0.1 0.00063 20.1 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.00048 19.8 0.0 0.00068 19.4 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.0048 16.4 0.1 0.0074 15.8 0.1 1.3 1 0 0 1 1 1 1 EF hand EF-hand_11 PF08976.11 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.0072 17.2 0.1 0.0091 16.9 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain IF2_N PF04760.15 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.02 14.7 0.1 0.028 14.2 0.1 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region DUF3890 PF13029.6 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.028 14.9 0.0 0.03 14.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3890) PRP38_assoc PF12871.7 NODE_70445_length_224_cov_2.830688_g62504_i0reverse_frame_3 - 6.4 7.5 43.1 2.2e+02 2.5 42.1 2.0 1 1 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term DUF3915 PF13054.6 NODE_70445_length_224_cov_2.830688_g62504_i0reverse_frame_2 - 2.1 8.3 36.3 0.66 10.0 9.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3915) Orthopox_A5L PF06193.11 NODE_70444_length_224_cov_2.888889_g62503_i0forward_frame_3 - 0.41 10.0 2.8 0.42 10.0 2.8 1.1 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like DUF2249 PF10006.9 NODE_70443_length_224_cov_2.941799_g62502_i0reverse_frame_3 - 0.071 13.0 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) Luteo_coat PF00894.18 NODE_70443_length_224_cov_2.941799_g62502_i0reverse_frame_2 - 0.077 12.9 0.1 0.083 12.8 0.1 1.1 1 0 0 1 1 1 0 Luteovirus coat protein DUF1730 PF08331.10 NODE_70442_length_224_cov_2.989418_g62501_i0forward_frame_3 - 0.076 12.9 0.1 0.088 12.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1730) HHH PF00633.23 NODE_70440_length_224_cov_3.031746_g62499_i0reverse_frame_3 - 1.4e-07 31.0 0.0 2.3e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 NODE_70440_length_224_cov_3.031746_g62499_i0reverse_frame_3 - 0.00036 21.1 0.0 0.00051 20.6 0.0 1.2 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 NODE_70440_length_224_cov_3.031746_g62499_i0reverse_frame_3 - 0.0024 17.9 0.0 0.0035 17.4 0.0 1.2 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 NODE_70440_length_224_cov_3.031746_g62499_i0reverse_frame_3 - 0.0052 17.0 0.0 0.0074 16.5 0.0 1.2 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF3272 PF11676.8 NODE_70440_length_224_cov_3.031746_g62499_i0forward_frame_3 - 0.033 14.4 0.0 0.043 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3272) DUF4918 PF16265.5 NODE_70437_length_224_cov_3.174603_g62496_i0forward_frame_3 - 0.15 11.6 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) DUF5090 PF17009.5 NODE_70435_length_224_cov_3.232804_g62494_i0forward_frame_2 - 0.69 9.8 7.1 0.79 9.7 7.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) ZFYVE21_C PF16696.5 NODE_70432_length_224_cov_3.576720_g62491_i0reverse_frame_2 - 0.024 14.5 0.1 0.025 14.5 0.1 1.2 1 0 0 1 1 1 0 Zinc finger FYVE domain-containing protein 21 C-terminus TORC_C PF12886.7 NODE_70427_length_224_cov_4.931217_g62486_i0reverse_frame_2 - 0.011 16.2 0.0 0.022 15.3 0.0 1.4 1 0 0 1 1 1 0 Transducer of regulated CREB activity, C terminus DUF2087 PF09860.9 NODE_70426_length_224_cov_5.619048_g62485_i0reverse_frame_3 - 0.053 13.7 0.2 0.084 13.0 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) DUF333 PF03891.15 NODE_70421_length_224_cov_27.391534_g62480_i0reverse_frame_3 - 0.053 13.8 0.1 0.14 12.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF333) Acyl-CoA_dh_N PF02771.16 NODE_70421_length_224_cov_27.391534_g62480_i0reverse_frame_2 - 0.042 14.5 0.0 0.052 14.2 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, N-terminal domain Flavodoxin_3 PF12641.7 NODE_70421_length_224_cov_27.391534_g62480_i0forward_frame_3 - 0.14 11.9 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Flavodoxin domain Actin PF00022.19 NODE_70417_length_224_cov_35.301587_g62476_i0reverse_frame_2 - 5.4e-14 51.6 0.1 6.4e-14 51.4 0.1 1.1 1 0 0 1 1 1 1 Actin Peptidase_C11 PF03415.14 NODE_70409_length_224_cov_41.026455_g62468_i0reverse_frame_2 - 0.049 13.0 0.0 0.051 13.0 0.0 1.0 1 0 0 1 1 1 0 Clostripain family AAA_17 PF13207.6 NODE_70409_length_224_cov_41.026455_g62468_i0reverse_frame_2 - 0.072 13.5 0.1 0.08 13.4 0.1 1.1 1 0 0 1 1 1 0 AAA domain PqqA PF08042.11 NODE_70407_length_224_cov_42.026455_g62466_i0reverse_frame_3 - 0.056 13.5 0.5 0.14 12.2 0.1 1.8 2 0 0 2 2 2 0 PqqA family Pkinase PF00069.25 NODE_70406_length_224_cov_43.052910_g62465_i0reverse_frame_3 - 3e-06 26.8 0.0 3.3e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 NODE_70406_length_224_cov_43.052910_g62465_i0reverse_frame_3 - 0.0082 15.8 0.0 0.0091 15.6 0.0 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 DUF4868 PF16162.5 NODE_70406_length_224_cov_43.052910_g62465_i0reverse_frame_3 - 0.021 14.7 0.5 0.03 14.2 0.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4868) C_Hendra PF16821.5 NODE_70401_length_224_cov_46.513228_g62460_i0reverse_frame_3 - 0.17 11.7 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 C protein from hendra and measles viruses Phospholamban PF04272.14 NODE_70396_length_224_cov_50.751323_g62455_i0reverse_frame_2 - 0.0028 17.1 3.8 0.0028 17.1 3.8 1.5 2 0 0 2 2 2 1 Phospholamban Spike_NTD PF16451.5 NODE_70396_length_224_cov_50.751323_g62455_i0reverse_frame_2 - 0.023 14.1 0.3 0.024 14.0 0.3 1.0 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain DUF4349 PF14257.6 NODE_70396_length_224_cov_50.751323_g62455_i0reverse_frame_2 - 0.061 12.8 0.0 0.074 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Vpu PF00558.19 NODE_70396_length_224_cov_50.751323_g62455_i0reverse_frame_2 - 7.4 6.4 6.6 3.7 7.4 4.1 1.7 1 1 1 2 2 2 0 Vpu protein DUF621 PF04789.15 NODE_70389_length_224_cov_57.941799_g62448_i0reverse_frame_3 - 0.71 9.0 11.4 0.79 8.8 11.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF621) YjcZ PF13990.6 NODE_70388_length_224_cov_59.417989_g62447_i0reverse_frame_2 - 0.022 14.2 0.1 0.025 14.0 0.1 1.0 1 0 0 1 1 1 0 YjcZ-like protein DUF1330 PF07045.11 NODE_70388_length_224_cov_59.417989_g62447_i0forward_frame_3 - 0.13 12.6 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1330) AGT PF11440.8 NODE_70386_length_224_cov_61.809524_g62445_i0forward_frame_2 - 0.042 12.9 0.0 0.044 12.8 0.0 1.1 1 0 0 1 1 1 0 DNA alpha-glucosyltransferase Pom PF17251.2 NODE_70382_length_224_cov_67.174603_g62441_i0forward_frame_2 - 0.2 11.0 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Protochlamydia outer membrane protein DUF4716 PF15837.5 NODE_70379_length_224_cov_73.238095_g62438_i0reverse_frame_2 - 0.98 9.5 5.9 14 5.9 1.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) TAN PF11640.8 NODE_70376_length_224_cov_78.820106_g62435_i0forward_frame_2 - 0.058 13.5 0.3 0.062 13.4 0.3 1.1 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair DUF3305 PF11749.8 NODE_70375_length_224_cov_79.148148_g62434_i0reverse_frame_3 - 0.018 15.1 0.1 0.02 15.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3305) T6SS_Vgr PF13296.6 NODE_70375_length_224_cov_79.148148_g62434_i0reverse_frame_3 - 0.11 12.6 0.0 0.15 12.2 0.0 1.3 1 1 0 1 1 1 0 Putative type VI secretion system Rhs element Vgr Dicistro_VP4 PF11492.8 NODE_70375_length_224_cov_79.148148_g62434_i0reverse_frame_3 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Cricket paralysis virus, VP4 YqzE PF14038.6 NODE_70375_length_224_cov_79.148148_g62434_i0reverse_frame_3 - 0.93 9.5 7.5 2.4 8.2 1.4 2.1 2 0 0 2 2 2 0 YqzE-like protein zf-3CxxC_2 PF17180.4 NODE_70375_length_224_cov_79.148148_g62434_i0reverse_frame_2 - 0.02 15.6 2.4 0.02 15.6 2.4 1.7 2 0 0 2 2 2 0 Zinc-binding domain DUF4201 PF13870.6 NODE_70374_length_224_cov_80.433862_g62433_i0reverse_frame_3 - 0.00031 20.5 0.6 0.00044 20.0 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) Imm74 PF15603.6 NODE_70374_length_224_cov_80.433862_g62433_i0reverse_frame_3 - 0.062 13.5 0.2 0.075 13.2 0.2 1.1 1 0 0 1 1 1 0 Immunity protein 74 TMIE PF16038.5 NODE_70369_length_224_cov_103.000000_g62428_i0forward_frame_2 - 0.46 10.4 3.2 1.1 9.2 3.2 1.9 1 1 0 1 1 1 0 TMIE protein DUF5409 PF17421.2 NODE_70369_length_224_cov_103.000000_g62428_i0forward_frame_2 - 2.7 8.8 7.2 5.8 7.7 7.2 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5409) Questin_oxidase PF14027.6 NODE_70365_length_224_cov_149.624339_g62424_i0reverse_frame_3 - 0.29 10.6 0.9 0.29 10.6 0.9 1.0 1 0 0 1 1 1 0 Questin oxidase-like PEGA PF08308.11 NODE_70364_length_224_cov_154.862434_g62423_i0reverse_frame_3 - 0.02 14.8 0.0 0.029 14.2 0.0 1.2 1 0 0 1 1 1 0 PEGA domain Ntox46 PF15538.6 NODE_70364_length_224_cov_154.862434_g62423_i0reverse_frame_2 - 0.1 12.6 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 46 PHD PF00628.29 NODE_70364_length_224_cov_154.862434_g62423_i0forward_frame_3 - 0.011 15.5 0.5 0.019 14.9 0.4 1.5 1 1 0 1 1 1 0 PHD-finger PHD_2 PF13831.6 NODE_70364_length_224_cov_154.862434_g62423_i0forward_frame_3 - 0.074 12.6 0.5 0.15 11.6 0.3 1.6 1 1 0 1 1 1 0 PHD-finger DUF1168 PF06658.12 NODE_70355_length_224_cov_215.597884_g62414_i0reverse_frame_2 - 0.025 14.4 17.2 0.035 13.9 17.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) TipAS PF07739.13 NODE_70355_length_224_cov_215.597884_g62414_i0reverse_frame_2 - 0.16 12.6 6.1 0.19 12.3 6.1 1.2 1 0 0 1 1 1 0 TipAS antibiotic-recognition domain PBECR1 PF18809.1 NODE_70355_length_224_cov_215.597884_g62414_i0reverse_frame_2 - 0.21 12.3 6.4 0.24 12.1 6.4 1.2 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1 Spt5_N PF11942.8 NODE_70355_length_224_cov_215.597884_g62414_i0reverse_frame_2 - 0.86 10.6 7.8 1.1 10.3 7.8 1.2 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal Ndc1_Nup PF09531.10 NODE_70355_length_224_cov_215.597884_g62414_i0forward_frame_2 - 1.8 7.2 8.6 2 7.0 8.6 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup LacY_symp PF01306.19 NODE_70354_length_224_cov_225.460317_g62413_i0reverse_frame_3 - 0.075 11.8 5.0 0.074 11.8 5.0 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter CagS PF16707.5 NODE_70351_length_224_cov_275.322751_g62410_i0reverse_frame_3 - 0.02 14.9 0.1 0.023 14.7 0.1 1.0 1 0 0 1 1 1 0 Cag pathogenicity island protein S of Helicobacter pylori Histone_H2A_C PF16211.5 NODE_70351_length_224_cov_275.322751_g62410_i0reverse_frame_2 - 0.077 12.7 3.5 0.11 12.2 3.5 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A DZR PF12773.7 NODE_70348_length_224_cov_406.375661_g62407_i0reverse_frame_3 - 0.0069 16.4 1.6 0.031 14.3 2.1 1.8 1 1 1 2 2 2 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 NODE_70348_length_224_cov_406.375661_g62407_i0reverse_frame_3 - 0.011 16.5 0.2 0.014 16.1 0.2 1.2 1 0 0 1 1 1 0 zinc-ribbon family UNC119_bdg PF15435.6 NODE_70347_length_224_cov_418.047619_g62406_i0forward_frame_2 - 0.072 12.6 0.2 0.082 12.5 0.2 1.0 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue Peptidase_S8 PF00082.22 NODE_70346_length_224_cov_426.174603_g62405_i0forward_frame_2 - 0.078 12.2 0.0 0.086 12.1 0.0 1.0 1 0 0 1 1 1 0 Subtilase family ScdA_N PF04405.14 NODE_70345_length_224_cov_532.137566_g62404_i0reverse_frame_3 - 0.029 14.0 0.0 0.045 13.4 0.0 1.4 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) DUF3823 PF12866.7 NODE_70344_length_224_cov_1389.111111_g62403_i0forward_frame_3 - 0.13 12.6 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3823) N-terminal domain Glyco_hydro_31 PF01055.26 NODE_70341_length_225_cov_0.784211_g62400_i0forward_frame_2 - 9.8e-16 58.0 0.1 9.9e-16 57.9 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Melibiase_2 PF16499.5 NODE_70341_length_225_cov_0.784211_g62400_i0forward_frame_2 - 0.067 12.4 0.0 0.067 12.4 0.0 1.0 1 0 0 1 1 1 0 Alpha galactosidase A DUF1065 PF06358.11 NODE_70340_length_225_cov_0.836842_g62399_i0forward_frame_3 - 0.15 12.0 0.1 0.16 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1065) Dendrin PF15498.6 NODE_70339_length_225_cov_0.842105_g62398_i0reverse_frame_2 - 0.016 14.0 1.6 0.017 13.9 1.6 1.0 1 0 0 1 1 1 0 Nephrin and CD2AP-binding protein, Dendrin RPAP2_Rtr1 PF04181.13 NODE_70337_length_225_cov_0.842105_g62396_i0reverse_frame_3 - 0.043 14.1 0.3 0.054 13.8 0.3 1.2 1 0 0 1 1 1 0 Rtr1/RPAP2 family zf-Tim10_DDP PF02953.15 NODE_70337_length_225_cov_0.842105_g62396_i0forward_frame_3 - 0.029 14.0 0.0 0.042 13.5 0.0 1.3 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Mitochondr_Som1 PF11093.8 NODE_70336_length_225_cov_0.842105_g62395_i0reverse_frame_2 - 0.084 12.9 0.1 0.091 12.8 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial export protein Som1 DUF996 PF06195.13 NODE_70331_length_225_cov_0.842105_g62390_i0reverse_frame_3 - 0.0068 16.7 1.5 0.0072 16.6 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF996) SpecificRecomb PF10136.9 NODE_70330_length_225_cov_0.878947_g62389_i0reverse_frame_3 - 0.076 11.3 0.8 0.082 11.2 0.8 1.0 1 0 0 1 1 1 0 Site-specific recombinase Biopterin_H PF00351.21 NODE_70322_length_225_cov_1.000000_g62381_i0forward_frame_2 - 1.2e-30 106.7 0.0 1.3e-30 106.6 0.0 1.0 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase Thia_YuaJ PF09515.10 NODE_70319_length_225_cov_1.031579_g62378_i0forward_frame_2 - 0.027 14.5 0.2 0.039 14.0 0.2 1.2 1 0 0 1 1 1 0 Thiamine transporter protein (Thia_YuaJ) BSMAP PF12280.8 NODE_70316_length_225_cov_1.052632_g62375_i0forward_frame_3 - 8.1 6.6 5.5 10 6.2 5.5 1.1 1 0 0 1 1 1 0 Brain specific membrane anchored protein CDP-OH_P_transf PF01066.21 NODE_70313_length_225_cov_1.052632_g62372_i0reverse_frame_3 - 0.027 15.3 0.2 0.032 15.0 0.2 1.1 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase Ribosomal_L11 PF00298.19 NODE_70313_length_225_cov_1.052632_g62372_i0forward_frame_3 - 0.052 14.1 0.2 0.068 13.7 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain zinc_ribbon_6 PF14599.6 NODE_70312_length_225_cov_1.052632_g62371_i0forward_frame_2 - 0.013 15.5 0.1 0.02 14.9 0.1 1.4 1 0 0 1 1 1 0 Zinc-ribbon Zn_Tnp_IS91 PF14319.6 NODE_70312_length_225_cov_1.052632_g62371_i0forward_frame_2 - 0.021 14.8 0.2 0.025 14.6 0.2 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain Ribosomal_S27e PF01667.17 NODE_70312_length_225_cov_1.052632_g62371_i0forward_frame_2 - 0.043 13.5 1.9 0.071 12.8 1.9 1.3 1 0 0 1 1 1 0 Ribosomal protein S27 DUF4575 PF15143.6 NODE_70304_length_225_cov_1.126316_g62363_i0reverse_frame_3 - 0.06 13.6 0.1 0.06 13.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4575) zf_Hakai PF18408.1 NODE_70304_length_225_cov_1.126316_g62363_i0forward_frame_2 - 0.058 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 C2H2 Hakai zinc finger domain PRCH PF03967.13 NODE_70303_length_225_cov_1.147368_g62362_i0forward_frame_2 - 0.53 10.5 1.6 0.78 10.0 1.6 1.2 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region ABC2_membrane_6 PF06182.11 NODE_70300_length_225_cov_1.194737_g62359_i0reverse_frame_3 - 0.42 10.3 8.4 0.38 10.5 0.8 2.0 1 1 1 2 2 2 0 ABC-2 family transporter protein DUF5460 PF17544.2 NODE_70297_length_225_cov_1.221053_g62356_i0forward_frame_2 - 0.13 11.2 0.1 0.15 11.0 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5460) zf-C2H2_4 PF13894.6 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.00038 21.1 6.9 0.053 14.4 0.5 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.00075 19.7 3.2 0.091 13.1 0.3 2.5 2 1 0 2 2 2 2 Zinc-finger double-stranded RNA-binding Mut7-C PF01927.16 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.0026 17.8 1.1 0.0029 17.7 1.1 1.1 1 0 0 1 1 1 1 Mut7-C RNAse domain zf_C2H2_ZHX PF18387.1 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.026 14.2 0.7 0.026 14.2 0.7 1.7 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zf-met PF12874.7 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.031 14.7 5.6 0.27 11.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.045 14.2 5.4 0.062 13.8 0.6 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_2 PF12756.7 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.75 10.2 4.7 2.5 8.5 0.3 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) FYVE PF01363.21 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 1.8 8.8 11.2 3.5 7.8 1.0 2.1 1 1 1 2 2 2 0 FYVE zinc finger zf-C2H2_11 PF16622.5 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 7.6 6.4 9.1 11 5.9 3.0 2.4 2 1 0 2 2 2 0 zinc-finger C2H2-type Poty_coat PF00767.18 NODE_70293_length_225_cov_1.257895_g62352_i0reverse_frame_2 - 0.0057 16.3 0.1 0.0058 16.2 0.1 1.0 1 0 0 1 1 1 1 Potyvirus coat protein Arteri_Gl PF00951.18 NODE_70293_length_225_cov_1.257895_g62352_i0forward_frame_3 - 0.75 9.6 5.5 0.83 9.4 5.5 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF2000 PF09391.10 NODE_70286_length_225_cov_1.263158_g62345_i0reverse_frame_2 - 0.034 14.1 0.1 0.038 13.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2000) CysG_dimeriser PF10414.9 NODE_70282_length_225_cov_1.268421_g62341_i0reverse_frame_3 - 0.01 15.5 0.1 0.015 15.0 0.1 1.2 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region Bactofilin PF04519.13 NODE_70281_length_225_cov_1.273684_g62340_i0forward_frame_3 - 0.0031 17.8 2.6 0.048 13.9 2.6 2.0 1 1 0 1 1 1 1 Polymer-forming cytoskeletal YfhO PF09586.10 NODE_70279_length_225_cov_1.294737_g62338_i0forward_frame_2 - 7.8 4.6 10.4 8.3 4.5 10.4 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO S_locus_glycop PF00954.20 NODE_70277_length_225_cov_1.331579_g62336_i0reverse_frame_3 - 0.053 14.1 0.8 0.058 13.9 0.8 1.1 1 0 0 1 1 1 0 S-locus glycoprotein domain RseC_MucC PF04246.12 NODE_70277_length_225_cov_1.331579_g62336_i0forward_frame_2 - 0.058 13.4 0.2 0.07 13.1 0.2 1.0 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF5432 PF17497.2 NODE_70275_length_225_cov_1.336842_g62334_i0forward_frame_2 - 0.13 12.4 0.5 0.13 12.4 0.5 1.7 2 1 0 2 2 2 0 Family of unknown function (DUF5432) WD40 PF00400.32 NODE_70274_length_225_cov_1.347368_g62333_i0forward_frame_2 - 0.027 15.3 0.2 0.057 14.3 0.1 1.6 2 0 0 2 2 2 0 WD domain, G-beta repeat Chlam_PMP PF02415.17 NODE_70273_length_225_cov_1.363158_g62332_i0reverse_frame_3 - 0.27 11.8 0.1 0.27 11.8 0.1 2.7 3 0 0 3 3 3 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat NPCC PF08058.11 NODE_70273_length_225_cov_1.363158_g62332_i0forward_frame_2 - 0.069 13.2 1.1 0.078 13.0 1.1 1.1 1 0 0 1 1 1 0 Nuclear pore complex component Lig_chan PF00060.26 NODE_70273_length_225_cov_1.363158_g62332_i0forward_frame_2 - 5.8 6.7 5.7 22 4.9 1.6 2.0 1 1 1 2 2 2 0 Ligand-gated ion channel RNA_pol_Rpb2_6 PF00562.28 NODE_70272_length_225_cov_1.363158_g62331_i0reverse_frame_2 - 2.6e-07 30.1 0.0 2.7e-07 30.0 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 DUF1934 PF09148.10 NODE_70272_length_225_cov_1.363158_g62331_i0reverse_frame_2 - 0.0019 18.2 0.0 0.002 18.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1934) EpuA PF11772.8 NODE_70270_length_225_cov_1.368421_g62329_i0forward_frame_2 - 0.14 11.8 0.1 0.22 11.3 0.1 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase subunit beta DUF1509 PF07420.11 NODE_70266_length_225_cov_1.378947_g62325_i0forward_frame_2 - 7.7 5.4 13.2 8.6 5.2 13.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Pkinase PF00069.25 NODE_70260_length_225_cov_1.410526_g62319_i0forward_frame_3 - 0.1 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain PNTB PF02233.16 NODE_70257_length_225_cov_1.431579_g62316_i0forward_frame_2 - 0.08 11.9 0.0 0.085 11.8 0.0 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit Ephrin_rec_like PF07699.13 NODE_70250_length_225_cov_1.473684_g62309_i0reverse_frame_3 - 2e-10 40.3 18.8 2.9e-07 30.1 7.8 2.3 1 1 2 3 3 3 2 Putative ephrin-receptor like TNFR_c6 PF00020.18 NODE_70250_length_225_cov_1.473684_g62309_i0reverse_frame_3 - 0.00035 20.9 7.5 0.0097 16.3 3.7 2.6 2 1 1 3 3 3 2 TNFR/NGFR cysteine-rich region NCD3G PF07562.14 NODE_70250_length_225_cov_1.473684_g62309_i0reverse_frame_3 - 0.0011 18.8 4.3 0.0013 18.6 2.7 1.9 1 1 1 2 2 2 1 Nine Cysteines Domain of family 3 GPCR Neuregulin PF02158.15 NODE_70250_length_225_cov_1.473684_g62309_i0reverse_frame_3 - 0.0038 16.6 0.8 0.0038 16.6 0.8 1.0 1 0 0 1 1 1 1 Neuregulin intracellular region Phage_DsbA PF11126.8 NODE_70248_length_225_cov_1.473684_g62307_i0forward_frame_3 - 0.051 13.8 0.0 0.066 13.4 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator DsbA Spermine_synt_N PF17284.2 NODE_70243_length_225_cov_1.521053_g62302_i0forward_frame_3 - 0.0084 16.0 0.1 0.012 15.5 0.1 1.3 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain LysM PF01476.20 NODE_70240_length_225_cov_1.557895_g62299_i0forward_frame_2 - 0.024 14.7 0.1 0.035 14.2 0.1 1.3 1 0 0 1 1 1 0 LysM domain K1377 PF15352.6 NODE_70240_length_225_cov_1.557895_g62299_i0forward_frame_2 - 0.092 11.0 1.5 0.095 11.0 1.5 1.0 1 0 0 1 1 1 0 Susceptibility to monomelic amyotrophy MCR_C PF04609.12 NODE_70237_length_225_cov_1.578947_g62296_i0forward_frame_3 - 0.027 13.6 0.1 0.031 13.3 0.1 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase operon protein C TraB PF01963.17 NODE_70237_length_225_cov_1.578947_g62296_i0forward_frame_3 - 0.2 11.5 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 TraB family RT_RNaseH PF17917.1 NODE_70236_length_225_cov_1.578947_g62295_i0forward_frame_2 - 0.15 12.3 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 RNase H-like domain found in reverse transcriptase Chorion_2 PF03964.15 NODE_70234_length_225_cov_1.589474_g62293_i0reverse_frame_2 - 0.0072 17.1 0.9 0.0079 17.0 0.9 1.1 1 0 0 1 1 1 1 Chorion family 2 DBD_Tnp_Mut PF03108.15 NODE_70232_length_225_cov_1.594737_g62291_i0reverse_frame_3 - 1.2 9.2 6.8 0.18 11.8 1.3 2.0 2 0 0 2 2 2 0 MuDR family transposase DDE_Tnp_1_5 PF13737.6 NODE_70227_length_225_cov_1.626316_g62286_i0forward_frame_3 - 0.026 14.8 0.4 0.03 14.6 0.4 1.1 1 0 0 1 1 1 0 Transposase DDE domain DUF1631 PF07793.11 NODE_70225_length_225_cov_1.636842_g62284_i0reverse_frame_3 - 0.024 13.1 1.0 0.027 12.9 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) DUF832 PF05734.11 NODE_70223_length_225_cov_1.642105_g62282_i0forward_frame_2 - 0.12 11.9 0.1 0.12 11.8 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) DUF1624 PF07786.12 NODE_70221_length_225_cov_1.652632_g62280_i0reverse_frame_2 - 0.12 12.0 6.1 0.13 11.8 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1624) Pyrid_oxidase_2 PF13883.6 NODE_70220_length_225_cov_1.652632_g62279_i0forward_frame_2 - 0.093 12.7 0.1 0.098 12.6 0.1 1.0 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase Kelch_1 PF01344.25 NODE_70215_length_225_cov_1.684211_g62274_i0forward_frame_3 - 6.6e-06 25.6 0.8 0.011 15.3 0.3 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_70215_length_225_cov_1.684211_g62274_i0forward_frame_3 - 9.6e-05 22.5 0.2 0.029 14.7 0.1 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_70215_length_225_cov_1.684211_g62274_i0forward_frame_3 - 0.00019 21.3 0.3 0.44 10.6 0.0 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_70215_length_225_cov_1.684211_g62274_i0forward_frame_3 - 0.00066 19.9 0.0 0.0024 18.1 0.0 1.8 2 0 0 2 2 2 1 Galactose oxidase, central domain TIC20 PF16166.5 NODE_70213_length_225_cov_1.684211_g62272_i0reverse_frame_3 - 0.033 14.0 1.2 0.036 13.8 1.2 1.1 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like DUF3677 PF12432.8 NODE_70213_length_225_cov_1.684211_g62272_i0forward_frame_2 - 0.037 14.3 0.5 0.053 13.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3677) PAXIP1_C PF15364.6 NODE_70208_length_225_cov_1.736842_g62267_i0forward_frame_3 - 0.24 11.7 0.0 0.28 11.5 0.0 1.1 1 0 0 1 1 1 0 PAXIP1-associated-protein-1 C term PTIP binding protein PgaD PF13994.6 NODE_70207_length_225_cov_1.736842_g62266_i0forward_frame_3 - 0.078 13.0 0.2 0.082 13.0 0.2 1.1 1 0 0 1 1 1 0 PgaD-like protein DUF4180 PF13788.6 NODE_70205_length_225_cov_1.757895_g62264_i0reverse_frame_2 - 0.025 14.5 0.2 0.027 14.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4180) UCH_N PF16674.5 NODE_70205_length_225_cov_1.757895_g62264_i0forward_frame_2 - 0.0021 17.9 0.0 0.0023 17.8 0.0 1.1 1 0 0 1 1 1 1 N-terminal of ubiquitin carboxyl-terminal hydrolase 37 DUF2304 PF10066.9 NODE_70204_length_225_cov_1.794737_g62263_i0reverse_frame_3 - 0.034 14.4 0.9 0.036 14.3 0.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) MRP-L47 PF06984.13 NODE_70204_length_225_cov_1.794737_g62263_i0reverse_frame_3 - 0.041 14.0 0.0 0.048 13.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) AflR PF08493.10 NODE_70202_length_225_cov_1.826316_g62261_i0forward_frame_3 - 0.018 14.5 0.1 0.023 14.2 0.1 1.1 1 0 0 1 1 1 0 Aflatoxin regulatory protein Sortase PF04203.13 NODE_70197_length_225_cov_1.884211_g62256_i0reverse_frame_3 - 0.031 14.1 0.0 0.034 14.0 0.0 1.1 1 0 0 1 1 1 0 Sortase domain Kinesin PF00225.23 NODE_70193_length_225_cov_1.910526_g62252_i0forward_frame_3 - 2.8e-19 69.2 0.1 2.9e-19 69.2 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_70193_length_225_cov_1.910526_g62252_i0forward_frame_3 - 3.8e-15 56.1 0.1 4.1e-15 56.0 0.1 1.0 1 0 0 1 1 1 1 Microtubule binding Bac_DnaA PF00308.18 NODE_70193_length_225_cov_1.910526_g62252_i0forward_frame_3 - 0.028 14.3 0.0 0.031 14.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein DUF2256 PF10013.9 NODE_70191_length_225_cov_1.947368_g62250_i0forward_frame_3 - 0.011 15.9 0.2 0.011 15.9 0.2 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF3365 PF11845.8 NODE_70191_length_225_cov_1.947368_g62250_i0forward_frame_3 - 0.048 14.0 0.1 0.049 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3365) OrfB_Zn_ribbon PF07282.11 NODE_70191_length_225_cov_1.947368_g62250_i0forward_frame_3 - 2.1 8.3 5.3 0.59 10.1 0.7 2.1 1 1 1 2 2 2 0 Putative transposase DNA-binding domain TCR_zetazeta PF11628.8 NODE_70188_length_225_cov_1.957895_g62247_i0reverse_frame_2 - 0.47 10.2 4.5 0.55 10.0 0.1 2.2 2 0 0 2 2 2 0 T-cell surface glycoprotein CD3 zeta chain RPN6_C_helix PF18503.1 NODE_70186_length_225_cov_2.021053_g62245_i0reverse_frame_2 - 0.28 11.0 1.9 0.53 10.1 0.1 2.2 3 0 0 3 3 3 0 26S proteasome subunit RPN6 C-terminal helix domain SHIPPO-rpt PF07004.12 NODE_70185_length_225_cov_2.052632_g62244_i0reverse_frame_2 - 0.0035 18.2 0.8 0.0079 17.1 0.8 1.6 1 0 0 1 1 1 1 Sperm-tail PG-rich repeat FANCI_HD1 PF14679.6 NODE_70183_length_225_cov_2.068421_g62242_i0forward_frame_2 - 0.076 13.0 0.1 0.099 12.6 0.1 1.2 1 0 0 1 1 1 0 FANCI helical domain 1 Pkinase PF00069.25 NODE_70182_length_225_cov_2.100000_g62241_i0reverse_frame_3 - 0.031 13.6 0.0 0.031 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein kinase domain CRF-BP PF05428.11 NODE_70181_length_225_cov_2.100000_g62240_i0forward_frame_2 - 0.11 11.3 0.1 0.12 11.1 0.1 1.0 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) Pyr_redox_dim PF02852.22 NODE_70177_length_225_cov_2.178947_g62236_i0forward_frame_3 - 3e-12 46.8 0.1 3.6e-12 46.5 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FMO-like PF00743.19 NODE_70176_length_225_cov_2.231579_g62235_i0reverse_frame_3 - 0.074 11.5 0.0 0.075 11.4 0.0 1.0 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like APA3_viroporin PF11289.8 NODE_70174_length_225_cov_2.242105_g62233_i0reverse_frame_3 - 2.3 7.7 6.6 2.5 7.6 6.6 1.1 1 0 0 1 1 1 0 Coronavirus accessory protein 3a DnaB_2 PF07261.11 NODE_70172_length_225_cov_2.247368_g62231_i0forward_frame_3 - 0.19 11.5 0.9 3.3 7.5 0.2 2.0 1 1 1 2 2 2 0 Replication initiation and membrane attachment MdcE PF06833.11 NODE_70170_length_225_cov_2.289474_g62229_i0reverse_frame_3 - 0.17 11.3 0.0 0.2 11.1 0.0 1.0 1 0 0 1 1 1 0 Malonate decarboxylase gamma subunit (MdcE) HCV_NS4a PF01006.20 NODE_70165_length_225_cov_2.326316_g62224_i0forward_frame_3 - 0.07 12.9 0.0 0.074 12.8 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS4a Sensor PF13796.6 NODE_70164_length_225_cov_2.331579_g62223_i0reverse_frame_3 - 0.039 14.0 0.0 0.04 14.0 0.0 1.0 1 0 0 1 1 1 0 Putative sensor DER1 PF04511.15 NODE_70162_length_225_cov_2.373684_g62221_i0forward_frame_2 - 0.018 14.9 0.0 0.021 14.8 0.0 1.0 1 0 0 1 1 1 0 Der1-like family TRAP-gamma PF07074.12 NODE_70160_length_225_cov_2.452632_g62219_i0reverse_frame_2 - 2.3 7.8 6.2 2.6 7.6 6.2 1.1 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Cgr1 PF03879.14 NODE_70160_length_225_cov_2.452632_g62219_i0reverse_frame_2 - 3.2 8.2 14.9 5.5 7.4 14.9 1.5 1 1 0 1 1 1 0 Cgr1 family FAM76 PF16046.5 NODE_70160_length_225_cov_2.452632_g62219_i0reverse_frame_2 - 4.5 6.5 9.2 5.3 6.3 9.2 1.0 1 0 0 1 1 1 0 FAM76 protein ubiquitin PF00240.23 NODE_70159_length_225_cov_2.473684_g62218_i0forward_frame_3 - 7.4e-14 51.3 0.0 9.8e-14 50.9 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_70159_length_225_cov_2.473684_g62218_i0forward_frame_3 - 7.7e-07 28.8 0.0 1e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 NODE_70159_length_225_cov_2.473684_g62218_i0forward_frame_3 - 0.13 12.4 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like PilZ PF07238.14 NODE_70157_length_225_cov_2.505263_g62216_i0forward_frame_3 - 0.00027 21.2 0.0 0.0003 21.1 0.0 1.1 1 0 0 1 1 1 1 PilZ domain zf-met PF12874.7 NODE_70155_length_225_cov_2.536842_g62214_i0reverse_frame_3 - 1.3e-08 34.9 2.2 2.6e-08 34.0 1.5 1.7 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-U1 PF06220.12 NODE_70155_length_225_cov_2.536842_g62214_i0reverse_frame_3 - 0.059 13.2 0.1 0.092 12.5 0.1 1.5 1 0 0 1 1 1 0 U1 zinc finger zf-C2H2_2 PF12756.7 NODE_70155_length_225_cov_2.536842_g62214_i0reverse_frame_3 - 0.083 13.2 1.1 0.1 12.9 1.1 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 NODE_70155_length_225_cov_2.536842_g62214_i0reverse_frame_3 - 1.2 9.5 6.0 2.8 8.3 5.2 2.1 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding SufE PF02657.15 NODE_70153_length_225_cov_2.610526_g62212_i0forward_frame_3 - 0.12 12.3 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Fe-S metabolism associated domain DUF3963 PF13124.6 NODE_70148_length_225_cov_2.678947_g62207_i0reverse_frame_2 - 0.037 14.0 0.3 0.065 13.2 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3963) Glyco_hydro_77 PF02446.17 NODE_70146_length_225_cov_2.742105_g62205_i0reverse_frame_2 - 0.075 11.9 0.0 0.08 11.8 0.0 1.0 1 0 0 1 1 1 0 4-alpha-glucanotransferase Polysacc_deac_1 PF01522.21 NODE_70144_length_225_cov_2.842105_g62203_i0reverse_frame_3 - 0.00016 21.6 0.0 0.00019 21.3 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide deacetylase IceA2 PF05862.11 NODE_70144_length_225_cov_2.842105_g62203_i0reverse_frame_3 - 0.076 12.9 0.0 0.095 12.6 0.0 1.1 1 0 0 1 1 1 0 Helicobacter pylori IceA2 protein Stomoxyn PF11585.8 NODE_70142_length_225_cov_2.978947_g62201_i0forward_frame_3 - 0.012 15.6 0.3 0.017 15.2 0.3 1.3 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn DUF2207 PF09972.9 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_2 - 0.013 14.3 10.0 0.013 14.2 10.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MgtE PF01769.16 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_2 - 0.048 14.0 6.8 0.046 14.1 6.8 1.0 1 0 0 1 1 1 0 Divalent cation transporter Phage_holin_3_6 PF07332.11 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_2 - 0.23 11.5 7.7 0.27 11.3 7.7 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III FA_desaturase PF00487.24 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_2 - 0.35 10.7 3.3 0.36 10.6 3.3 1.0 1 0 0 1 1 1 0 Fatty acid desaturase TRAP_alpha PF03896.16 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_3 - 0.26 10.4 4.1 0.24 10.6 4.1 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit DUF4637 PF15470.6 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_3 - 2 8.1 9.6 2.2 8.0 9.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DNA_pol_phi PF04931.13 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_3 - 3.4 5.7 16.8 3.7 5.5 16.8 1.0 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_3 - 9.1 5.3 13.6 10 5.2 13.6 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF4242 PF14026.6 NODE_70139_length_225_cov_3.068421_g62198_i0reverse_frame_3 - 0.042 14.0 0.2 0.049 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4242) Atrophin-1 PF03154.15 NODE_70139_length_225_cov_3.068421_g62198_i0reverse_frame_2 - 2.8 6.1 9.9 3 6.0 9.9 1.0 1 0 0 1 1 1 0 Atrophin-1 family ZU5 PF00791.20 NODE_70139_length_225_cov_3.068421_g62198_i0forward_frame_3 - 0.19 12.1 0.0 0.22 11.9 0.0 1.2 1 0 0 1 1 1 0 ZU5 domain Collagen_mid PF15984.5 NODE_70135_length_225_cov_3.178947_g62194_i0forward_frame_2 - 0.024 14.4 0.0 0.03 14.1 0.0 1.0 1 0 0 1 1 1 0 Bacterial collagen, middle region V_ATPase_I PF01496.19 NODE_70130_length_225_cov_3.415789_g62189_i0forward_frame_3 - 8.1e-08 30.7 0.0 8.6e-08 30.6 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family LIFR_D2 PF17971.1 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_3 - 0.024 14.8 0.2 0.025 14.8 0.2 1.1 1 0 0 1 1 1 0 Leukemia inhibitory factor receptor D2 domain PPDK_N PF01326.19 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 0.18 11.1 3.3 0.21 10.8 3.3 1.0 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DUF1003 PF06210.11 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 0.22 11.6 1.8 0.23 11.6 1.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) DUF1664 PF07889.12 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 0.51 10.4 7.3 0.56 10.2 7.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DivIC PF04977.15 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 2.5 7.9 9.3 1.4 8.8 1.7 2.1 1 1 1 2 2 2 0 Septum formation initiator FAM76 PF16046.5 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 3.3 7.0 9.5 4.1 6.7 9.5 1.0 1 0 0 1 1 1 0 FAM76 protein XhlA PF10779.9 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 3.6 7.9 8.3 0.68 10.2 3.1 1.9 1 1 1 2 2 2 0 Haemolysin XhlA Aminotran_1_2 PF00155.21 NODE_70126_length_225_cov_3.815789_g62185_i0reverse_frame_3 - 4.2e-17 62.4 0.0 4.3e-17 62.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II zf-CCHC PF00098.23 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_3 - 4.2e-07 29.7 0.7 6.8e-07 29.1 0.7 1.4 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_3 - 0.0013 18.5 0.8 0.0027 17.5 0.8 1.6 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_4 PF14392.6 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_3 - 0.11 12.2 0.7 0.18 11.5 0.7 1.3 1 0 0 1 1 1 0 Zinc knuckle WTX PF09422.10 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_2 - 1.1 8.2 3.5 1.1 8.3 3.5 1.0 1 0 0 1 1 1 0 WTX protein DUF2116 PF09889.9 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_2 - 2.9 8.0 4.4 6.8 6.8 0.2 2.2 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF782 PF05614.11 NODE_70124_length_225_cov_4.357895_g62183_i0forward_frame_3 - 0.065 13.6 0.1 0.078 13.4 0.1 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) Glyco_hydro_16 PF00722.21 NODE_70123_length_225_cov_4.752632_g62182_i0reverse_frame_3 - 0.089 12.3 0.0 0.089 12.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 16 TPR_20 PF14561.6 NODE_70120_length_225_cov_18.857895_g62179_i0reverse_frame_2 - 0.03 14.7 0.0 0.035 14.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Mce4_CUP1 PF11887.8 NODE_70117_length_225_cov_21.631579_g62176_i0reverse_frame_3 - 0.23 10.9 0.4 0.25 10.8 0.4 1.0 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative Ribosomal_S2 PF00318.20 NODE_70113_length_225_cov_32.868421_g62172_i0reverse_frame_3 - 0.23 10.7 0.2 0.26 10.5 0.2 1.0 1 0 0 1 1 1 0 Ribosomal protein S2 Vpu PF00558.19 NODE_70113_length_225_cov_32.868421_g62172_i0forward_frame_2 - 0.077 12.8 0.7 0.083 12.7 0.6 1.3 1 1 0 1 1 1 0 Vpu protein HGWP PF03578.15 NODE_70112_length_225_cov_32.894737_g62171_i0forward_frame_3 - 0.057 12.9 0.2 0.089 12.3 0.2 1.3 1 0 0 1 1 1 0 HGWP repeat DUF3509 PF12021.8 NODE_70112_length_225_cov_32.894737_g62171_i0forward_frame_2 - 0.089 12.6 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3509) zf-RING_4 PF14570.6 NODE_70111_length_225_cov_34.415789_g62170_i0forward_frame_2 - 0.062 13.1 0.4 0.062 13.1 0.4 1.7 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Cadherin_tail PF15974.5 NODE_70109_length_225_cov_35.110526_g62168_i0reverse_frame_3 - 0.03 14.7 2.3 0.034 14.5 2.3 1.1 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks330.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks330.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks330.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks330.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Seryl_tRNA_N PF02403.22 NODE_70107_length_225_cov_39.347368_g62166_i0reverse_frame_3 - 7.4e-10 39.0 2.6 8.4e-10 38.8 2.6 1.0 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Ank_2 PF12796.7 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 1.7e-06 28.5 0.0 2.1e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 6.5e-06 26.4 0.0 0.00036 20.8 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 3.6e-05 24.2 0.0 4.9e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 0.0054 17.0 0.0 0.006 16.9 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 0.007 16.8 0.0 0.013 16.0 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat XFP_N PF09364.10 NODE_70102_length_225_cov_50.642105_g62161_i0forward_frame_2 - 0.22 10.3 0.0 0.24 10.2 0.0 1.0 1 0 0 1 1 1 0 XFP N-terminal domain ZNRF_3_ecto PF18212.1 NODE_70101_length_225_cov_50.657895_g62160_i0forward_frame_3 - 0.02 14.8 0.0 0.023 14.7 0.0 1.1 1 0 0 1 1 1 0 ZNRF-3 Ectodomain Copine PF07002.16 NODE_70100_length_225_cov_51.500000_g62159_i0forward_frame_3 - 2.3e-08 33.8 0.0 2.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 Copine TMEM173 PF15009.6 NODE_70100_length_225_cov_51.500000_g62159_i0forward_frame_3 - 0.039 13.1 0.0 0.044 12.9 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 173 SLR1-BP PF07333.12 NODE_70098_length_225_cov_52.226316_g62157_i0reverse_frame_2 - 0.0034 17.8 3.8 0.0045 17.4 3.8 1.2 1 0 0 1 1 1 1 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Fer2_4 PF13510.6 NODE_70094_length_225_cov_55.873684_g62153_i0reverse_frame_2 - 0.0061 16.6 1.8 0.0078 16.2 1.8 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain DUF4179 PF13786.6 NODE_70094_length_225_cov_55.873684_g62153_i0reverse_frame_2 - 0.61 10.6 3.3 1.5 9.4 3.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4179) TPR_14 PF13428.6 NODE_70093_length_225_cov_56.242105_g62152_i0forward_frame_3 - 0.088 13.7 0.0 0.22 12.4 0.0 1.6 2 0 0 2 2 2 0 Tetratricopeptide repeat C6_DPF PF10170.9 NODE_70090_length_225_cov_61.515789_g62149_i0reverse_frame_2 - 3.6e-14 52.9 2.7 5.8e-14 52.2 2.7 1.3 1 0 0 1 1 1 1 Cysteine-rich domain DAPDH_C PF16654.5 NODE_70086_length_225_cov_68.373684_g62145_i0reverse_frame_3 - 0.014 15.2 0.2 0.014 15.2 0.2 1.0 1 0 0 1 1 1 0 Diaminopimelic acid dehydrogenase C-terminal domain DUF1836 PF08876.11 NODE_70086_length_225_cov_68.373684_g62145_i0reverse_frame_3 - 0.021 14.9 3.5 0.023 14.7 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1836) DUF2492 PF10678.9 NODE_70085_length_225_cov_69.289474_g62144_i0reverse_frame_3 - 0.039 14.2 0.3 0.061 13.6 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) YMF19 PF02326.15 NODE_70081_length_225_cov_74.900000_g62140_i0forward_frame_2 - 0.018 15.8 1.5 0.02 15.7 1.5 1.3 1 1 0 1 1 1 0 Plant ATP synthase F0 ICAP-1_inte_bdg PF10480.9 NODE_70074_length_225_cov_90.526316_g62133_i0forward_frame_2 - 0.43 10.5 8.5 0.51 10.3 8.5 1.1 1 0 0 1 1 1 0 Beta-1 integrin binding protein ATP13 PF12921.7 NODE_70071_length_225_cov_97.605263_g62130_i0reverse_frame_3 - 0.06 13.2 0.1 0.064 13.1 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ATPase expression Glyco_transf_25 PF01755.17 NODE_70068_length_225_cov_112.436842_g62127_i0forward_frame_3 - 3.1e-11 43.5 0.0 3.1e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) BHD_3 PF10405.9 NODE_70054_length_225_cov_199.857895_g62113_i0forward_frame_2 - 0.00044 20.6 0.0 0.00063 20.1 0.0 1.3 1 0 0 1 1 1 1 Rad4 beta-hairpin domain 3 FAO_M PF16350.5 NODE_70053_length_225_cov_246.905263_g62112_i0reverse_frame_3 - 0.03 14.7 0.2 0.049 14.0 0.2 1.4 1 1 0 1 1 1 0 FAD dependent oxidoreductase central domain Mid1 PF12929.7 NODE_70053_length_225_cov_246.905263_g62112_i0forward_frame_3 - 0.083 12.1 0.9 0.098 11.8 0.9 1.0 1 0 0 1 1 1 0 Stretch-activated Ca2+-permeable channel component Na_trans_assoc PF06512.13 NODE_70051_length_225_cov_409.215789_g62110_i0reverse_frame_3 - 0.08 13.2 0.0 0.094 13.0 0.0 1.0 1 0 0 1 1 1 0 Sodium ion transport-associated MaoC_dehydratas PF01575.19 NODE_70047_length_225_cov_1355.284211_g62106_i0reverse_frame_2 - 0.0066 16.0 0.0 0.11 12.1 0.0 2.0 1 1 1 2 2 2 2 MaoC like domain GlcNAc-1_reg PF18440.1 ORF99608 - 0.064 13.5 1.8 0.075 13.3 1.8 1.2 1 1 0 1 1 1 0 Putative GlcNAc-1 phosphotransferase regulatory domain UPF0556 PF10572.9 ORF99475 - 0.08 12.4 0.0 0.087 12.3 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0556 Skp1_POZ PF03931.15 ORF98887 - 1.9e-05 24.7 0.5 1.9e-05 24.7 0.5 1.7 2 0 0 2 2 2 1 Skp1 family, tetramerisation domain IBD PF10416.9 ORF98164 - 0.035 14.1 0.2 0.038 14.0 0.2 1.2 1 0 0 1 1 1 0 Transcription-initiator DNA-binding domain IBD Imm42 PF15593.6 ORF97982 - 0.04 14.4 0.2 0.047 14.2 0.2 1.0 1 0 0 1 1 1 0 Immunity protein 42 DUF5548 PF17702.1 ORF97709 - 0.37 10.5 2.6 0.4 10.4 2.4 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5548) Gln-synt_C PF00120.24 ORF9741 - 0.14 11.2 0.6 0.13 11.2 0.6 1.0 1 0 0 1 1 1 0 Glutamine synthetase, catalytic domain DUF963 PF06131.11 ORF96995 - 0.44 10.0 7.4 1.3 8.5 1.9 2.4 2 1 0 2 2 2 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) FlaG PF03646.15 ORF96957 - 0.079 13.1 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 FlaG protein DUF4321 PF14209.6 ORF96910 - 0.055 13.3 1.7 1.3 8.9 0.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4321) PRT_C PF08372.10 ORF96910 - 0.13 12.0 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal QueT PF06177.11 ORF96908 - 0.023 15.1 0.2 0.024 15.0 0.2 1.1 1 0 0 1 1 1 0 QueT transporter ALMT PF11744.8 ORF96908 - 0.25 10.1 0.1 0.26 10.1 0.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter COX1 PF00115.20 ORF96613 - 1.6e-13 50.4 4.0 1.7e-13 50.2 4.0 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I TetR_C_36 PF18598.1 ORF96038 - 0.04 13.9 0.1 0.044 13.8 0.1 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain A2L_zn_ribbon PF08792.10 ORF95991 - 0.21 11.3 0.1 0.21 11.3 0.1 1.6 2 0 0 2 2 2 0 A2L zinc ribbon domain ATP_transf PF09830.9 ORF95983 - 2.4e-14 53.2 0.0 2.8e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 ATP adenylyltransferase DUF4716 PF15837.5 ORF95935 - 0.39 10.8 6.8 2.7 8.1 0.7 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4716) Adenosine_kin PF04008.14 ORF95799 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Adenosine specific kinase IncE PF17627.2 ORF95741 - 0.01 15.9 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Inclusion membrane protein E RuvX PF03652.15 ORF95731 - 3.5e-19 69.5 0.0 3.8e-19 69.4 0.0 1.0 1 0 0 1 1 1 1 Holliday junction resolvase DUF5470 PF17564.2 ORF95655 - 0.11 12.7 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5470) Asp_Glu_race PF01177.22 ORF95473 - 0.11 12.3 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Asp/Glu/Hydantoin racemase DUF384 PF04064.13 ORF9504 - 3.1e-07 30.1 0.1 3.7e-07 29.9 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF384) Kelch_5 PF13854.6 ORF94875 - 0.00019 21.4 0.1 0.00026 20.9 0.1 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 ORF94875 - 0.00024 21.3 0.0 0.0003 21.0 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 ORF94875 - 0.002 18.1 0.0 0.0025 17.8 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain DUF1724 PF08350.10 ORF94875 - 0.024 14.7 0.0 0.03 14.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1724) Guanylate_cyc_2 PF09778.9 ORF94704 - 0.028 13.8 1.3 0.034 13.5 1.3 1.0 1 0 0 1 1 1 0 Guanylylate cyclase Cdc6_C PF09079.11 ORF94455 - 0.066 13.2 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain DeoC PF01791.9 ORF94415 - 0.086 12.4 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 DeoC/LacD family aldolase Synaptobrevin PF00957.21 ORF93940 - 0.011 15.5 0.8 0.016 15.0 0.8 1.3 1 0 0 1 1 1 0 Synaptobrevin DUF5480 PF17576.2 ORF93730 - 0.15 12.0 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5480) Rap1-DNA-bind PF09197.10 ORF93654 - 0.014 16.0 1.3 0.015 15.8 1.3 1.0 1 0 0 1 1 1 0 Rap1, DNA-binding Pkinase PF00069.25 ORF92943 - 1.6e-15 57.2 0.1 1.6e-15 57.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92943 - 9.6e-08 31.6 0.0 1.1e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF92943 - 0.0031 16.3 0.0 0.0031 16.3 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Myc_target_1 PF15179.6 ORF92925 - 2 8.3 7.6 2.6 7.9 7.6 1.1 1 0 0 1 1 1 0 Myc target protein 1 Nucleoporin2 PF04096.14 ORF92474 - 0.07 13.2 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Nucleoporin autopeptidase DUF1340 PF07067.11 ORF90319 - 0.07 12.5 0.0 0.07 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1340) BolA PF01722.18 ORF903 - 7.4e-14 51.8 0.0 8.6e-14 51.6 0.0 1.1 1 0 0 1 1 1 1 BolA-like protein Annexin_like PF18411.1 ORF903 - 0.092 13.0 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Annexin-like domain Cytochrom_B562 PF07361.11 ORF89761 - 1.8e-22 79.9 1.0 2e-22 79.8 1.0 1.0 1 0 0 1 1 1 1 Cytochrome b562 PSII_Pbs27 PF13326.6 ORF89761 - 0.037 14.3 0.1 0.039 14.3 0.1 1.0 1 0 0 1 1 1 0 Photosystem II Pbs27 Phage_BR0599 PF09356.10 ORF89465 - 0.12 12.8 0.1 0.16 12.4 0.1 1.3 1 1 0 1 1 1 0 Phage conserved hypothetical protein BR0599 HYR PF02494.16 ORF8945 - 0.044 14.1 0.0 0.056 13.8 0.0 1.1 1 0 0 1 1 1 0 HYR domain Mtc PF03820.17 ORF88867 - 8.3e-18 64.5 0.3 8.4e-18 64.5 0.3 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier Strumpellin PF10266.9 ORF88790 - 0.1 10.3 0.1 0.11 10.2 0.1 1.0 1 0 0 1 1 1 0 Hereditary spastic paraplegia protein strumpellin DUF2249 PF10006.9 ORF88755 - 0.048 13.5 0.1 0.072 13.0 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) ADP_ribosyl_GH PF03747.14 ORF8777 - 1.1e-08 35.2 0.0 1.1e-08 35.2 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase zf-C2H2 PF00096.26 ORF86499 - 3e-12 46.3 14.4 1.1e-06 28.7 3.8 2.1 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF86499 - 1.2e-10 41.3 11.6 4.1e-05 24.1 2.4 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF86499 - 4e-09 36.5 14.0 5.2e-05 23.5 1.6 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_jaz PF12171.8 ORF86499 - 4.3e-05 23.7 11.6 0.012 15.9 1.7 2.2 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 ORF86499 - 0.00014 21.5 2.9 0.046 13.5 0.1 2.2 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-C2H2_3rep PF18868.1 ORF86499 - 0.0004 21.0 0.3 0.00048 20.8 0.3 1.1 1 0 0 1 1 1 1 Zinc finger C2H2-type, 3 repeats zf-C2H2_2 PF12756.7 ORF86499 - 0.00054 20.2 7.1 0.18 12.2 0.6 2.1 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) PyrI_C PF02748.15 ORF86499 - 0.00055 19.8 4.4 0.04 13.8 0.8 2.3 2 0 0 2 2 2 2 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2H2_6 PF13912.6 ORF86499 - 0.00056 19.8 13.8 0.007 16.3 4.6 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-BED PF02892.15 ORF86499 - 0.0013 18.7 13.6 0.069 13.2 2.5 2.3 1 1 1 2 2 2 2 BED zinc finger zf-Di19 PF05605.12 ORF86499 - 0.0034 17.7 5.6 0.33 11.3 0.6 2.1 2 0 0 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding DUF2256 PF10013.9 ORF86499 - 0.0067 16.5 2.3 0.86 9.8 0.2 2.2 2 0 0 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2256) zf-Dof PF02701.15 ORF86499 - 0.018 15.1 7.8 0.34 11.1 0.4 2.2 1 1 1 2 2 2 0 Dof domain, zinc finger zf-CHCC PF10276.9 ORF86499 - 0.02 14.9 7.5 0.28 11.3 0.3 2.3 2 0 0 2 2 2 0 Zinc-finger domain zinc_ribbon_15 PF17032.5 ORF86499 - 0.041 14.6 2.9 0.048 14.4 2.9 1.2 1 0 0 1 1 1 0 zinc-ribbon family zf-H2C2_5 PF13909.6 ORF86499 - 0.045 13.5 20.6 0.074 12.8 4.7 3.3 2 2 0 2 2 2 0 C2H2-type zinc-finger domain zf-met PF12874.7 ORF86499 - 0.05 14.0 10.7 1.1 9.8 1.8 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2HE PF16278.5 ORF86499 - 0.052 14.0 1.8 0.052 14.0 1.8 2.4 2 1 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger DUF629 PF04780.12 ORF86499 - 0.072 11.6 5.9 0.21 10.1 0.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF629) zf-MYST PF17772.1 ORF86499 - 0.087 12.4 5.2 2.9 7.6 0.2 2.2 2 0 0 2 2 2 0 MYST family zinc finger domain Rpr2 PF04032.16 ORF86499 - 0.11 12.8 5.1 0.5 10.7 0.7 2.0 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Sprouty PF05210.13 ORF86499 - 0.14 12.6 3.0 3.2 8.2 0.7 2.0 2 0 0 2 2 2 0 Sprouty protein (Spry) zf-C2HC_2 PF13913.6 ORF86499 - 0.14 12.1 8.6 0.25 11.3 0.8 2.8 2 1 0 2 2 2 0 zinc-finger of a C2HC-type COMM_domain PF07258.14 ORF86319 - 0.0043 17.1 0.2 0.0079 16.3 0.2 1.5 1 1 0 1 1 1 1 COMM domain hnRNP_Q_AcD PF18360.1 ORF85771 - 0.094 12.7 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain DegT_DnrJ_EryC1 PF01041.17 ORF85697 - 0.048 13.0 0.0 0.062 12.6 0.0 1.1 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family SecY PF00344.20 ORF83935 - 9.3e-11 41.5 1.7 1.1e-10 41.3 1.7 1.1 1 0 0 1 1 1 1 SecY translocase DUF5079 PF16882.5 ORF83935 - 0.018 14.9 0.8 0.019 14.8 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5079) DUF485 PF04341.12 ORF83935 - 0.21 11.6 2.8 0.22 11.5 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF1405 PF07187.11 ORF8365 - 0.078 13.0 0.3 0.25 11.3 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1405) PIN_2 PF10130.9 ORF83599 - 0.21 11.9 3.5 0.24 11.6 3.5 1.0 1 0 0 1 1 1 0 PIN domain CSRNP_N PF16019.5 ORF83599 - 1.5 8.7 6.2 1.5 8.7 6.2 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus DUF2603 PF10788.9 ORF83443 - 0.0028 17.7 1.6 0.0035 17.4 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2603) Leu_zip PF15294.6 ORF83443 - 0.012 15.1 5.1 0.015 14.9 5.1 1.0 1 0 0 1 1 1 0 Leucine zipper Lustrin_cystein PF14625.6 ORF83248 - 0.018 15.4 4.3 0.081 13.3 4.3 2.0 1 1 0 1 1 1 0 Lustrin, cysteine-rich repeated domain DAGK_cat PF00781.24 ORF82968 - 8.1e-10 38.4 0.1 8.4e-10 38.3 0.1 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NusB PF01029.18 ORF82845 - 5.1e-23 81.8 0.0 5.3e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 NusB family Imm3 PF14425.6 ORF82845 - 0.056 13.5 0.0 0.065 13.3 0.0 1.1 1 0 0 1 1 1 0 Immunity protein Imm3 MPS2 PF17060.5 ORF82509 - 0.062 12.6 0.4 0.067 12.4 0.4 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 HTH_Mga PF08280.11 ORF82485 - 0.062 13.3 0.3 0.085 12.9 0.3 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain PPV_E1_C PF00519.17 ORF82139 - 0.04 12.8 0.0 0.043 12.7 0.0 1.1 1 0 0 1 1 1 0 Papillomavirus helicase KH_dom-like PF14714.6 ORF81936 - 0.0087 16.3 0.2 0.011 16.0 0.2 1.1 1 0 0 1 1 1 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Meckelin PF09773.9 ORF81905 - 0.0018 16.5 1.8 0.0021 16.3 1.8 1.0 1 0 0 1 1 1 1 Meckelin (Transmembrane protein 67) Rsd_AlgQ PF04353.13 ORF81905 - 0.0081 16.1 1.2 0.0096 15.9 1.2 1.0 1 0 0 1 1 1 1 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DUF4298 PF14131.6 ORF81905 - 0.017 15.1 6.2 0.021 14.8 6.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) CDC24 PF06395.11 ORF81905 - 0.03 14.6 0.1 0.031 14.5 0.1 1.2 1 0 0 1 1 1 0 CDC24 Calponin Annexin PF00191.20 ORF81905 - 0.046 13.8 0.2 1.7 8.8 0.0 2.3 2 1 0 2 2 2 0 Annexin DUF1482 PF07358.11 ORF81841 - 0.056 13.4 0.2 12 5.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1482) MORN PF02493.20 ORF81230 - 8e-14 50.6 14.4 7.6e-08 31.8 0.6 3.2 3 0 0 3 3 3 2 MORN repeat ID PF18543.1 ORF81230 - 0.2 11.7 0.3 26 4.9 0.1 2.4 1 1 1 2 2 2 0 Intracellular delivery domain CCER1 PF15482.6 ORF81051 - 0.012 15.5 4.9 0.012 15.5 4.9 1.4 1 1 1 2 2 2 0 Coiled-coil domain-containing glutamate-rich protein family 1 AAA_lid_3 PF17862.1 ORF80283 - 6.5e-07 29.1 0.0 9.7e-07 28.5 0.0 1.3 1 1 0 1 1 1 1 AAA+ lid domain Vps4_C PF09336.10 ORF80283 - 0.00026 20.9 0.0 0.0003 20.7 0.0 1.2 1 0 0 1 1 1 1 Vps4 C terminal oligomerisation domain COX1 PF00115.20 ORF80161 - 1.6e-13 50.4 4.0 1.7e-13 50.2 4.0 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Sulfotransfer_2 PF03567.14 ORF7893 - 0.086 12.7 0.0 0.16 11.9 0.0 1.5 1 1 0 1 1 1 0 Sulfotransferase family COX1 PF00115.20 ORF78887 - 1.6e-13 50.4 4.0 1.7e-13 50.2 4.0 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I PLDc_2 PF13091.6 ORF78529 - 0.024 14.5 0.0 0.024 14.5 0.0 1.1 1 0 0 1 1 1 0 PLD-like domain TIP_N PF12457.8 ORF7759 - 0.074 13.4 0.6 0.086 13.2 0.6 1.1 1 0 0 1 1 1 0 Tuftelin interacting protein N terminal DUF5526 PF17664.1 ORF76915 - 0.05 13.2 0.1 0.057 13.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5526) ZapB PF06005.12 ORF76640 - 0.019 15.4 8.5 0.019 15.4 8.5 2.0 1 1 1 2 2 2 0 Cell division protein ZapB betaPIX_CC PF16523.5 ORF76640 - 0.044 13.6 7.1 0.048 13.5 5.6 1.8 1 1 1 2 2 2 0 betaPIX coiled coil Sds3 PF08598.11 ORF76640 - 0.045 13.7 7.9 0.051 13.6 7.9 1.1 1 0 0 1 1 1 0 Sds3-like bZIP_1 PF00170.21 ORF76640 - 0.053 13.6 4.0 0.053 13.6 4.0 2.4 1 1 1 2 2 2 0 bZIP transcription factor ACCA PF03255.14 ORF76640 - 0.12 12.3 4.8 0.13 12.1 4.8 1.1 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Cdh1_DBD_1 PF18196.1 ORF76640 - 0.12 12.7 12.4 0.13 12.6 12.4 1.0 1 0 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 APG6_N PF17675.1 ORF76640 - 0.19 12.2 12.8 0.28 11.7 12.8 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF16 PF01519.16 ORF76640 - 0.31 11.5 10.3 0.35 11.4 10.3 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 DUF349 PF03993.12 ORF76640 - 0.35 11.2 9.0 0.49 10.7 9.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF349) DUF724 PF05266.14 ORF76640 - 0.37 10.6 10.0 0.38 10.6 10.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 ORF76640 - 0.43 10.6 13.5 0.49 10.5 13.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF76640 - 0.69 9.2 6.6 0.75 9.1 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Ax_dynein_light PF10211.9 ORF76640 - 0.97 9.3 12.5 1.1 9.2 12.5 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain Fzo_mitofusin PF04799.13 ORF76640 - 1 8.9 6.3 5 6.7 6.3 1.8 1 1 0 1 1 1 0 fzo-like conserved region FapA PF03961.13 ORF76640 - 3.1 6.3 12.4 3.1 6.3 12.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4337 PF14235.6 ORF76640 - 6.9 6.8 8.5 7.8 6.6 8.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Dzip-like_N PF13815.6 ORF76640 - 9.4 6.2 10.6 0.87 9.6 4.6 1.8 1 1 1 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal Kinase-PPPase PF03618.14 ORF76335 - 7.5e-07 29.2 0.0 8.2e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 Kinase/pyrophosphorylase Tub PF01167.18 ORF75732 - 1e-08 35.3 0.0 1e-08 35.2 0.0 1.0 1 0 0 1 1 1 1 Tub family Flavin_Reduct PF01613.18 ORF74880 - 7.9e-12 45.5 0.1 8.4e-12 45.4 0.1 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Arginase PF00491.21 ORF74880 - 0.16 11.4 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Arginase family ECSCR PF15820.5 ORF74641 - 0.35 10.7 3.7 0.4 10.5 3.7 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Phage_holin_3_6 PF07332.11 ORF74641 - 0.68 10.0 15.2 0.86 9.7 15.2 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3742 PF12553.8 ORF74641 - 0.88 9.7 4.7 1 9.5 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) PIN_2 PF10130.9 ORF74512 - 0.21 11.9 3.5 0.24 11.6 3.5 1.0 1 0 0 1 1 1 0 PIN domain CSRNP_N PF16019.5 ORF74512 - 1.5 8.7 6.2 1.5 8.7 6.2 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Imm42 PF15593.6 ORF74352 - 0.04 14.4 0.2 0.047 14.2 0.2 1.0 1 0 0 1 1 1 0 Immunity protein 42 DUF1534 PF07551.11 ORF73723 - 1.8 8.4 7.4 3.3 7.5 2.8 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1534) DUF4216 PF13952.6 ORF73691 - 0.084 13.3 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4216) SecM PF06558.12 ORF72887 - 2e-20 73.4 0.2 2.2e-20 73.2 0.2 1.0 1 0 0 1 1 1 1 Secretion monitor precursor protein (SecM) DUF759 PF05537.11 ORF72149 - 6.4e-05 22.0 0.6 6.8e-05 21.9 0.6 1.0 1 0 0 1 1 1 1 Borrelia burgdorferi protein of unknown function (DUF759) LapA_dom PF06305.11 ORF71651 - 0.13 12.1 0.5 0.26 11.1 0.5 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain MYO10_CC PF16735.5 ORF71079 - 0.031 14.4 3.5 0.036 14.2 2.9 1.4 1 1 0 1 1 1 0 Unconventional myosin-X coiled coil domain HTH_22 PF13309.6 ORF70945 - 0.16 12.1 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 HTH domain DUF1482 PF07358.11 ORF7058 - 0.056 13.4 0.2 12 5.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1482) PTA_PTB PF01515.19 ORF70148 - 1.2e-24 87.3 0.0 1.3e-24 87.1 0.0 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase Haem_bd PF14376.6 ORF69861 - 0.033 14.1 0.7 0.035 14.0 0.7 1.0 1 0 0 1 1 1 0 Haem-binding domain UPF0370 PF13980.6 ORF69861 - 0.22 11.6 1.4 0.27 11.3 0.3 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0370) Pkinase PF00069.25 ORF69630 - 1.3e-10 41.1 0.3 1.3e-10 41.1 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF69630 - 5.9e-08 32.3 0.1 6.1e-08 32.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RPEL PF02755.15 ORF68762 - 1.7 8.5 5.4 0.82 9.5 2.5 1.9 2 0 0 2 2 2 0 RPEL repeat Acetyltransf_13 PF13880.6 ORF68734 - 0.16 12.0 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Toxin_19 PF08088.12 ORF68589 - 4.9 7.4 7.5 1.5 9.0 0.2 2.8 3 1 0 3 3 3 0 Conotoxin I-superfamily TPR_11 PF13414.6 ORF68490 - 0.079 12.7 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 TPR repeat UPF0242 PF06785.11 ORF68421 - 0.027 14.6 1.2 0.029 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Chromo_2 PF18704.1 ORF67549 - 0.065 13.5 0.2 0.15 12.3 0.1 1.6 1 1 1 2 2 2 0 Chromatin organization modifier domain 2 EbsA PF17255.2 ORF66966 - 3.2 8.1 8.7 12 6.2 0.3 2.0 1 1 1 2 2 2 0 EbsA-like protein AFP PF02420.15 ORF66555 - 0.14 12.6 0.4 0.14 12.6 0.4 1.6 2 0 0 2 2 2 0 Insect antifreeze protein repeat UPF0242 PF06785.11 ORF65892 - 0.027 14.6 1.2 0.029 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3858 PF12970.7 ORF65734 - 0.026 14.5 0.1 0.03 14.4 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3858) CSD PF00313.22 ORF6535 - 6.3e-29 99.6 0.2 7.1e-29 99.5 0.2 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF6535 - 0.00086 18.9 0.1 0.0012 18.5 0.1 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain Amidase_6 PF12671.7 ORF6535 - 0.082 13.0 0.0 0.084 13.0 0.0 1.0 1 0 0 1 1 1 0 Putative amidase domain DUF1482 PF07358.11 ORF65016 - 0.056 13.4 0.2 12 5.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1482) DAGK_cat PF00781.24 ORF64906 - 8.1e-10 38.4 0.1 8.4e-10 38.3 0.1 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain QslA_E PF18226.1 ORF64613 - 0.0038 17.1 0.2 0.049 13.5 0.0 2.0 2 0 0 2 2 2 1 LasR-specific antiactivator QslA chain E RebB PF11747.8 ORF63927 - 0.073 13.2 0.0 0.086 13.0 0.0 1.2 1 0 0 1 1 1 0 Killing trait CitX PF03802.14 ORF63746 - 0.082 12.7 0.1 0.1 12.4 0.1 1.1 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase RecR PF02132.15 ORF63557 - 0.039 13.5 0.1 0.056 13.0 0.1 1.2 1 0 0 1 1 1 0 RecR protein Pkinase PF00069.25 ORF63478 - 4.5e-16 59.0 0.0 4.6e-16 59.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63478 - 1.3e-06 27.9 0.0 1.6e-06 27.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Glyco_transf_8C PF08437.10 ORF62607 - 0.14 12.2 0.1 0.2 11.7 0.1 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 8 C-terminal PhoLip_ATPase_C PF16212.5 ORF62537 - 0.093 12.5 0.7 0.12 12.1 0.1 1.4 2 0 0 2 2 2 0 Phospholipid-translocating P-type ATPase C-terminal LepB_GAP_C PF18227.1 ORF61924 - 0.077 13.5 0.0 0.093 13.3 0.0 1.1 1 0 0 1 1 1 0 LepB GAP domain C-terminal subdomain Synaptobrevin PF00957.21 ORF61826 - 0.011 15.5 0.8 0.016 15.0 0.8 1.3 1 0 0 1 1 1 0 Synaptobrevin SWIM PF04434.17 ORF61458 - 0.45 10.2 7.8 0.61 9.8 7.8 1.3 1 0 0 1 1 1 0 SWIM zinc finger YTH PF04146.15 ORF61279 - 2.5e-13 50.3 0.0 2.7e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 YT521-B-like domain Ntox21 PF15526.6 ORF61014 - 0.063 13.6 0.1 0.071 13.4 0.1 1.1 1 0 0 1 1 1 0 Novel toxin 21 CRAL_TRIO PF00650.20 ORF60735 - 0.0065 16.2 0.7 0.0067 16.2 0.7 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain zinc-ribbons_6 PF07191.12 ORF60663 - 0.068 13.2 3.3 0.16 11.9 3.4 1.6 1 1 0 1 1 1 0 zinc-ribbons CxC3 PF18804.1 ORF60663 - 0.079 12.8 1.9 0.086 12.7 1.9 1.1 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases zf-3CxxC_2 PF17180.4 ORF60663 - 0.66 10.7 6.3 1.9 9.3 4.6 2.0 1 1 1 2 2 2 0 Zinc-binding domain Herpes_UL32 PF06070.11 ORF60649 - 0.063 11.0 1.7 0.071 10.9 1.7 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 CCER1 PF15482.6 ORF60330 - 0.012 15.5 4.9 0.012 15.5 4.9 1.4 1 1 1 2 2 2 0 Coiled-coil domain-containing glutamate-rich protein family 1 LIN52 PF10044.9 ORF60227 - 0.16 12.7 0.0 0.2 12.4 0.0 1.2 1 0 0 1 1 1 0 Retinal tissue protein N-glycanase_C PF09113.10 ORF60 - 0.063 13.1 0.3 0.065 13.0 0.3 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal CBP_BcsR PF10945.8 ORF59483 - 0.051 13.1 0.0 0.075 12.5 0.0 1.3 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR DUF3244 PF11589.8 ORF59355 - 0.051 13.7 0.1 0.057 13.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3244) HPS6 PF15702.5 ORF59267 - 0.21 9.5 0.0 0.22 9.5 0.0 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein DUF3750 PF12570.8 ORF5924 - 0.092 13.4 0.0 0.12 13.0 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3750) Ig_J_chain PF15097.6 ORF58955 - 0.0078 16.1 0.5 0.0095 15.8 0.5 1.1 1 0 0 1 1 1 1 Immunoglobulin J chain SCVP PF17619.2 ORF58955 - 0.048 14.5 0.0 0.055 14.3 0.0 1.1 1 0 0 1 1 1 0 Secreted clade V proteins Exo84_C PF16528.5 ORF58569 - 0.096 12.5 1.5 0.11 12.4 1.5 1.1 1 0 0 1 1 1 0 Exocyst component 84 C-terminal DNA_ligase_IV PF11411.8 ORF58211 - 1.9e-06 27.9 0.0 2.7e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 DNA ligase IV OmdA PF13376.6 ORF58211 - 0.14 12.2 0.0 10 6.2 0.0 2.4 1 1 1 2 2 2 0 Bacteriocin-protection, YdeI or OmpD-Associated CCDC73 PF15818.5 ORF5745 - 0.25 9.2 0.0 0.27 9.0 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 73 family Herpes_pp38 PF04846.13 ORF57402 - 0.55 10.2 2.4 0.38 10.7 0.8 1.6 1 1 1 2 2 2 0 Herpesvirus pp38 phosphoprotein HTH_21 PF13276.6 ORF57354 - 0.059 13.5 1.6 0.085 13.0 1.6 1.3 1 0 0 1 1 1 0 HTH-like domain Baculo_p48 PF04878.13 ORF57354 - 0.25 10.3 0.0 0.28 10.1 0.0 1.0 1 0 0 1 1 1 0 Baculovirus P48 protein OrfA PF17495.2 ORF56993 - 0.095 12.9 0.3 0.11 12.6 0.3 1.2 1 0 0 1 1 1 0 Vpr-like OrfA CCDC73 PF15818.5 ORF56114 - 0.25 9.2 0.0 0.27 9.0 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 73 family DAGK_cat PF00781.24 ORF56075 - 8.1e-10 38.4 0.1 8.4e-10 38.3 0.1 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Transmemb_17 PF09799.9 ORF559 - 0.0039 17.8 0.2 0.0045 17.6 0.2 1.0 1 0 0 1 1 1 1 Predicted membrane protein AAA_lid_5 PF17865.1 ORF559 - 4.2 7.5 5.8 17 5.5 0.4 2.1 1 1 1 2 2 2 0 Midasin AAA lid domain Colipase PF01114.18 ORF55501 - 0.015 15.0 0.8 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 Colipase, N-terminal domain TusA PF01206.17 ORF54909 - 0.084 12.7 0.2 0.2 11.5 0.1 1.6 2 0 0 2 2 2 0 Sulfurtransferase TusA DUF4777 PF16007.5 ORF54909 - 0.22 11.8 2.9 1.5 9.2 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4777) F_actin_bind PF08919.10 ORF54903 - 0.096 12.8 0.0 0.11 12.6 0.0 1.0 1 0 0 1 1 1 0 F-actin binding CAP-ZIP_m PF15255.6 ORF54881 - 0.033 14.4 4.7 0.038 14.3 4.7 1.1 1 0 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region DUF4844 PF16133.5 ORF54876 - 0.0011 19.5 0.3 0.0012 19.3 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4844) DUF5013 PF16405.5 ORF54857 - 0.085 13.1 0.0 0.089 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5013) Ac76 PF05814.11 ORF54850 - 0.31 11.1 3.4 0.34 10.9 3.4 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) DUF4527 PF15030.6 ORF54023 - 0.0087 15.5 0.6 0.0087 15.5 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4527) Fanconi_C PF02106.15 ORF53811 - 0.15 10.8 0.0 0.16 10.6 0.0 1.0 1 0 0 1 1 1 0 Fanconi anaemia group C protein UCH PF00443.29 ORF52948 - 0.00012 21.6 0.4 0.00012 21.6 0.4 1.5 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF52948 - 0.27 10.8 0.3 0.27 10.8 0.3 1.6 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase UvrA_inter PF17760.1 ORF52844 - 0.12 12.5 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 UvrA interaction domain UPF0242 PF06785.11 ORF52224 - 0.027 14.6 1.2 0.029 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Helicase_RecD PF05127.14 ORF51902 - 0.025 14.4 0.2 0.027 14.3 0.2 1.0 1 0 0 1 1 1 0 Helicase COX1 PF00115.20 ORF51701 - 1.6e-13 50.4 4.0 1.7e-13 50.2 4.0 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I UPF0029 PF01205.19 ORF51008 - 0.14 12.5 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0029 RNA_polI_A34 PF08208.11 ORF50996 - 0.0014 18.7 7.2 0.0015 18.6 7.2 1.0 1 0 0 1 1 1 1 DNA-directed RNA polymerase I subunit RPA34.5 NKAP PF15692.5 ORF50996 - 0.012 16.3 13.8 0.016 15.9 13.8 1.2 1 0 0 1 1 1 0 NF-kappa-B-activating protein DSPc PF00782.20 ORF50888 - 0.002 17.9 0.2 0.0022 17.8 0.2 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain DUF212 PF02681.14 ORF50888 - 0.034 14.3 0.2 0.037 14.2 0.2 1.1 1 0 0 1 1 1 0 Divergent PAP2 family Y_phosphatase PF00102.27 ORF50888 - 0.077 12.5 0.2 0.08 12.5 0.2 1.0 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Init_tRNA_PT PF04179.12 ORF50888 - 0.12 12.7 0.1 0.13 12.6 0.1 1.1 1 0 0 1 1 1 0 Rit1 DUSP-like domain CBM_5_12 PF02839.14 ORF5069 - 0.061 13.9 1.7 0.11 13.2 0.1 2.1 2 0 0 2 2 2 0 Carbohydrate binding domain Ank_5 PF13857.6 ORF49282 - 2.1e-11 43.8 0.2 3.6e-11 43.1 0.2 1.4 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF49282 - 6.2e-09 35.9 0.1 1.1e-07 32.0 0.3 2.2 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 ORF49282 - 8.3e-08 32.6 0.1 0.0042 17.6 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF49282 - 5.2e-07 30.2 0.0 1.1e-06 29.1 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF49282 - 1.1e-06 28.5 0.1 3.6e-05 23.8 0.0 2.5 2 1 0 2 2 2 1 Ankyrin repeat DUF3343 PF11823.8 ORF48315 - 0.074 12.5 0.1 0.11 12.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) DUF4427 PF14468.6 ORF48315 - 0.19 11.8 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4427) JHY PF15261.6 ORF4830 - 0.00024 21.8 0.3 0.00024 21.8 0.3 1.1 1 0 0 1 1 1 1 Jhy protein SMN PF06003.12 ORF48055 - 0.055 12.7 0.0 0.063 12.5 0.0 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) DUF515 PF04415.12 ORF46976 - 2 6.7 5.2 2.2 6.6 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) DUF2303 PF10065.9 ORF4662 - 0.029 13.5 0.0 0.032 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) Bromo_TP PF07524.13 ORF4662 - 0.046 13.7 0.1 0.07 13.1 0.1 1.3 1 0 0 1 1 1 0 Bromodomain associated Ndc1_Nup PF09531.10 ORF46065 - 8.5 4.9 12.9 9.1 4.8 12.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DMT_6 PF04342.12 ORF45563 - 0.01 16.1 1.0 0.012 15.8 1.0 1.1 1 0 0 1 1 1 1 Putative member of DMT superfamily (DUF486) RAI16-like PF10257.9 ORF45563 - 0.029 13.3 0.2 0.029 13.3 0.2 1.0 1 0 0 1 1 1 0 Retinoic acid induced 16-like protein Rop PF01815.16 ORF45045 - 7.7e-35 118.6 2.0 8.9e-35 118.3 2.0 1.0 1 0 0 1 1 1 1 Rop protein C5HCH PF17982.1 ORF44944 - 1.1 9.5 12.3 6.7 7.0 7.7 2.6 1 1 1 2 2 2 0 NSD Cys-His rich domain NR_Repeat PF14046.6 ORF44915 - 0.013 15.6 0.1 0.019 15.1 0.1 1.3 1 0 0 1 1 1 0 Nuclear receptor repeat Colipase PF01114.18 ORF44869 - 0.015 15.0 0.8 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 Colipase, N-terminal domain Takusan PF04822.13 ORF44852 - 0.011 15.6 0.1 0.013 15.4 0.1 1.1 1 0 0 1 1 1 0 Takusan B12D PF06522.11 ORF44367 - 0.085 12.7 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit 4F5 PF04419.14 ORF44230 - 0.00017 22.4 10.7 0.00024 21.9 10.7 1.3 1 0 0 1 1 1 1 4F5 protein family zf-Di19 PF05605.12 ORF44230 - 0.0017 18.6 0.6 0.0026 18.0 0.6 1.3 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-met2 PF12907.7 ORF44230 - 0.0017 18.4 1.0 0.0036 17.4 1.0 1.6 1 0 0 1 1 1 1 Zinc-binding zf-C2H2_4 PF13894.6 ORF44230 - 0.021 15.6 1.1 0.049 14.5 1.1 1.6 1 0 0 1 1 1 0 C2H2-type zinc finger APCDDC PF14921.6 ORF43706 - 0.019 14.4 0.2 0.019 14.4 0.2 1.0 1 0 0 1 1 1 0 Adenomatosis polyposis coli down-regulated 1 RAG2_PHD PF13341.6 ORF43706 - 0.033 14.2 0.1 0.047 13.8 0.1 1.3 1 0 0 1 1 1 0 RAG2 PHD domain CBM32 PF18344.1 ORF43262 - 0.11 12.3 1.3 0.14 12.0 0.6 1.6 1 1 0 1 1 1 0 Carbohydrate binding module family 32 Aminotran_3 PF00202.21 ORF42603 - 1.3e-07 30.6 0.0 1.3e-07 30.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Rop PF01815.16 ORF42364 - 7.7e-35 118.6 2.0 8.9e-35 118.3 2.0 1.0 1 0 0 1 1 1 1 Rop protein Smoa_sbd PF17885.1 ORF42150 - 0.19 11.8 0.0 0.36 10.9 0.0 1.5 1 1 0 1 1 1 0 Styrene monooxygenase A putative substrate binding domain CENP-R PF06729.12 ORF42037 - 0.018 15.0 0.2 0.019 14.9 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R ABC_tran_Xtn PF12848.7 ORF42037 - 0.36 10.9 3.4 5.4 7.1 0.4 2.0 1 1 1 2 2 2 0 ABC transporter Acetyltransf_18 PF18014.1 ORF41400 - 0.15 11.9 2.1 0.16 11.8 2.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DAGK_cat PF00781.24 ORF41344 - 8.1e-10 38.4 0.1 8.4e-10 38.3 0.1 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain 2OG-FeII_Oxy_3 PF13640.6 ORF41274 - 0.0019 19.1 0.0 0.0022 18.8 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily UPF0242 PF06785.11 ORF4122 - 0.027 14.6 1.2 0.029 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Receptor_2B4 PF11465.8 ORF40846 - 0.018 15.2 0.4 0.022 15.0 0.4 1.1 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 Vmethyltransf_C PF08456.10 ORF40769 - 0.2 11.2 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Viral methyltransferase C-terminal DUF4110 PF13422.6 ORF39977 - 0.035 14.2 0.1 0.046 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4110) Pex14_N PF04695.13 ORF39423 - 0.12 13.0 1.3 0.13 12.9 1.3 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Pacifastin_I PF05375.13 ORF39167 - 0.08 12.7 3.8 0.08 12.7 3.8 1.7 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) DUF4337 PF14235.6 ORF38962 - 6.6 6.8 7.3 8 6.6 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) MAP17 PF15807.5 ORF38962 - 8.4 6.6 7.0 8.6 6.6 7.0 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 FANCI_HD1 PF14679.6 ORF38911 - 0.088 12.8 2.5 0.14 12.2 0.3 1.9 1 1 1 2 2 2 0 FANCI helical domain 1 DUF1908 PF08926.11 ORF38575 - 0.081 12.0 0.1 0.084 11.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) Dot_icm_IcmQ PF09475.10 ORF38234 - 0.053 13.0 0.1 0.06 12.8 0.1 1.0 1 0 0 1 1 1 0 Dot/Icm secretion system protein (dot_icm_IcmQ) DUF2631 PF10939.8 ORF38218 - 0.41 10.5 2.0 0.57 10.1 0.5 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2631) RVT_3 PF13456.6 ORF38114 - 0.064 13.1 0.2 0.079 12.8 0.2 1.1 1 0 0 1 1 1 0 Reverse transcriptase-like WRC PF08879.10 ORF37243 - 0.068 12.9 0.5 0.13 12.0 0.5 1.4 1 0 0 1 1 1 0 WRC FtsX PF02687.21 ORF37114 - 0.084 13.4 1.9 0.1 13.1 1.9 1.1 1 0 0 1 1 1 0 FtsX-like permease family zf-C2H2_assoc PF16606.5 ORF36860 - 0.0048 17.1 2.9 0.0056 16.9 2.9 1.1 1 0 0 1 1 1 1 Unstructured conserved, between two C2H2-type zinc-fingers Vasohibin PF14822.6 ORF3683 - 0.03 13.6 0.2 0.033 13.4 0.2 1.0 1 0 0 1 1 1 0 Vasohibin DUF2738 PF10927.8 ORF36609 - 0.04 13.0 0.2 0.044 12.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2738) Y_phosphatase2 PF03162.13 ORF36609 - 0.048 13.2 1.5 0.049 13.2 0.7 1.5 1 1 1 2 2 2 0 Tyrosine phosphatase family Transglut_core PF01841.19 ORF36219 - 0.098 13.1 0.1 0.11 13.0 0.1 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily HopA1 PF17914.1 ORF35653 - 0.029 14.1 0.0 0.031 14.0 0.0 1.1 1 0 0 1 1 1 0 HopA1 effector protein family EphA2_TM PF14575.6 ORF35180 - 0.0088 16.9 0.1 0.01 16.7 0.1 1.3 1 0 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain SpoVIF PF14069.6 ORF35180 - 0.14 11.9 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Stage VI sporulation protein F HPS6 PF15702.5 ORF35072 - 0.21 9.5 0.0 0.22 9.5 0.0 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein LapA_dom PF06305.11 ORF34906 - 0.13 12.1 0.5 0.26 11.1 0.5 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain HPS6 PF15702.5 ORF33298 - 0.21 9.5 0.0 0.22 9.5 0.0 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein TPMT PF05724.11 ORF33032 - 1.1e-09 38.3 0.0 1.1e-09 38.2 0.0 1.0 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) BRCA-2_OB3 PF09104.10 ORF32541 - 0.026 14.2 0.3 0.028 14.1 0.3 1.1 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 PspB PF06667.12 ORF32413 - 3.1e-32 110.4 0.5 3.4e-32 110.3 0.5 1.0 1 0 0 1 1 1 1 Phage shock protein B BatA PF07584.11 ORF32413 - 0.0032 17.8 1.0 0.0038 17.6 1.0 1.1 1 0 0 1 1 1 1 Aerotolerance regulator N-terminal DUF3886 PF13025.6 ORF32413 - 0.016 15.3 2.5 0.022 14.9 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3886) P22_AR_C PF10548.9 ORF32413 - 0.052 13.7 0.1 0.052 13.7 0.1 1.7 1 1 1 2 2 2 0 P22AR C-terminal domain YPEB PF14620.6 ORF32413 - 0.091 12.1 0.3 0.097 12.0 0.3 1.0 1 0 0 1 1 1 0 YpeB sporulation Peptidase_S49_N PF08496.10 ORF32413 - 0.098 12.7 0.0 0.11 12.6 0.0 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal MORN PF02493.20 ORF31722 - 4.9e-17 60.7 26.0 7.5e-07 28.7 3.3 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF31722 - 0.019 14.6 3.6 1.6 8.5 0.1 2.4 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain DUF5438 PF17506.2 ORF31144 - 0.025 14.9 0.0 0.029 14.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5438) Tristanin_u2 PF16638.5 ORF30829 - 0.078 13.8 0.8 0.1 13.4 0.8 1.1 1 0 0 1 1 1 0 Unstructured region on methyltransferase between zinc-fingers N1221 PF07923.13 ORF30573 - 0.1 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 N1221-like protein DUF4367 PF14285.6 ORF30473 - 0.15 12.5 3.7 0.16 12.4 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4367) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks331.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks331.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks331.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks331.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:21:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GIT_CC PF16559.5 ORF3030 - 0.018 14.9 0.2 0.026 14.4 0.2 1.3 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor PK PF00224.21 ORF30275 - 7.8e-39 133.5 1.8 8.4e-39 133.4 1.8 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain Glyco_hydro_3_C PF01915.22 ORF30275 - 0.11 12.4 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain Spc7 PF08317.11 ORF29836 - 0.0056 15.6 9.2 0.0061 15.5 9.2 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein KxDL PF10241.9 ORF29836 - 0.0077 16.5 3.7 0.12 12.7 1.4 2.0 1 1 1 2 2 2 1 Uncharacterized conserved protein THOC7 PF05615.13 ORF29836 - 0.0077 16.5 8.6 0.012 15.9 8.6 1.4 1 1 0 1 1 1 1 Tho complex subunit 7 Strumpellin PF10266.9 ORF29836 - 0.012 13.4 3.5 0.012 13.3 3.5 1.0 1 0 0 1 1 1 0 Hereditary spastic paraplegia protein strumpellin Atg14 PF10186.9 ORF29836 - 0.021 13.9 6.1 0.023 13.8 6.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1664 PF07889.12 ORF29836 - 0.023 14.8 3.5 0.026 14.5 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) ApoLp-III PF07464.11 ORF29836 - 0.024 14.7 4.3 0.031 14.4 4.3 1.2 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DegQ PF08181.11 ORF29836 - 0.035 14.2 2.4 0.035 14.2 2.4 2.1 2 0 0 2 2 2 0 DegQ (SacQ) family Golgin_A5 PF09787.9 ORF29836 - 0.042 13.3 9.0 0.045 13.2 9.0 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF87 PF01935.17 ORF29836 - 0.082 13.0 3.9 0.083 13.0 3.9 1.0 1 0 0 1 1 1 0 Helicase HerA, central domain SWI-SNF_Ssr4 PF08549.10 ORF29836 - 0.14 10.8 3.4 0.13 10.9 3.4 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) CREPT PF16566.5 ORF29836 - 0.15 12.2 6.7 0.23 11.6 6.7 1.4 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour Histidinol_dh PF00815.20 ORF29836 - 0.2 10.6 2.8 0.21 10.5 2.8 1.0 1 0 0 1 1 1 0 Histidinol dehydrogenase Snapin_Pallidin PF14712.6 ORF29836 - 0.25 11.8 6.1 0.38 11.2 6.1 1.3 1 0 0 1 1 1 0 Snapin/Pallidin YtxH PF12732.7 ORF29836 - 0.43 11.1 2.9 1 10.0 2.9 1.7 1 1 0 1 1 1 0 YtxH-like protein FapA PF03961.13 ORF29836 - 0.56 8.7 7.4 0.6 8.7 7.4 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A HR1 PF02185.16 ORF29836 - 0.57 10.3 8.5 3.1 8.0 3.6 2.6 1 1 1 2 2 2 0 Hr1 repeat GrpE PF01025.19 ORF29836 - 0.88 9.2 9.8 7.4 6.2 9.8 1.9 1 1 0 1 1 1 0 GrpE TMPIT PF07851.13 ORF29836 - 0.99 8.6 6.7 1 8.6 6.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein Cgr1 PF03879.14 ORF29836 - 1.8 9.0 8.9 2.5 8.5 8.9 1.3 1 1 0 1 1 1 0 Cgr1 family Rad50_zn_hook PF04423.14 ORF29836 - 2.5 8.0 11.3 2.2 8.2 1.6 3.0 2 1 1 3 3 3 0 Rad50 zinc hook motif DUF4337 PF14235.6 ORF29836 - 3 7.9 6.5 3.5 7.7 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF515 PF04415.12 ORF29103 - 2 6.7 5.2 2.2 6.6 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Phage_lambda_P PF06992.11 ORF2868 - 0.14 11.9 0.1 0.16 11.7 0.1 1.0 1 0 0 1 1 1 0 Replication protein P DUF1216 PF06746.11 ORF28062 - 0.019 15.0 0.3 0.023 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1216) BC10 PF06726.12 ORF27587 - 0.093 13.0 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Bladder cancer-related protein BC10 CCDC73 PF15818.5 ORF26383 - 0.25 9.2 0.0 0.27 9.0 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 73 family Mce4_CUP1 PF11887.8 ORF26229 - 0.019 14.4 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative DUF1548 PF07579.11 ORF26229 - 0.085 13.2 0.0 0.09 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) DUF1636 PF07845.11 ORF26110 - 0.066 13.7 0.1 0.069 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) CBM32 PF18344.1 ORF25924 - 0.11 12.3 1.3 0.14 12.0 0.6 1.6 1 1 0 1 1 1 0 Carbohydrate binding module family 32 Imm8 PF15586.6 ORF25045 - 0.12 12.5 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 8 BrnA_antitoxin PF14384.6 ORF24800 - 0.0079 16.7 0.0 0.0098 16.4 0.0 1.2 1 0 0 1 1 1 1 BrnA antitoxin of type II toxin-antitoxin system Kinase-PPPase PF03618.14 ORF24348 - 7.5e-07 29.2 0.0 8.2e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 Kinase/pyrophosphorylase RskA PF10099.9 ORF24089 - 0.1 12.9 0.5 0.12 12.7 0.5 1.0 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DTW PF03942.15 ORF23534 - 7.5e-07 29.1 0.0 7.5e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 DTW domain Pkinase PF00069.25 ORF23232 - 1.1e-05 25.0 0.0 1.1e-05 25.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Choline_kinase PF01633.20 ORF23232 - 0.058 13.0 0.0 0.066 12.8 0.0 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase APH PF01636.23 ORF23232 - 0.081 12.8 0.0 0.081 12.8 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family RRF PF01765.19 ORF23018 - 3e-05 24.0 2.6 3.2e-05 23.9 2.6 1.0 1 0 0 1 1 1 1 Ribosome recycling factor Casc1_N PF15927.5 ORF23018 - 0.0096 15.6 1.2 0.01 15.5 1.2 1.1 1 0 0 1 1 1 1 Cancer susceptibility candidate 1 N-terminus APT PF03440.14 ORF22489 - 0.18 11.8 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Aerolysin/Pertussis toxin (APT) domain Benyvirus_14KDa PF07255.11 ORF22456 - 0.049 13.8 0.0 0.053 13.7 0.0 1.1 1 0 0 1 1 1 0 Benyvirus 14KDa protein SERTA PF06031.13 ORF21987 - 0.12 12.1 0.3 0.33 10.7 0.0 1.9 2 1 0 2 2 2 0 SERTA motif DUF4457 PF14652.6 ORF21705 - 9.3e-20 71.1 0.1 1e-19 71.0 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4457) Chal_sti_synt_N PF00195.19 ORF21674 - 0.15 11.4 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain CBP4 PF07960.11 ORF21257 - 0.21 11.4 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 CBP4 MOLO1 PF17175.4 ORF21097 - 0.0079 16.3 0.4 0.0087 16.2 0.4 1.1 1 0 0 1 1 1 1 Modulator of levamisole receptor-1 CBM_5_12 PF02839.14 ORF20616 - 0.061 13.9 1.7 0.11 13.2 0.1 2.1 2 0 0 2 2 2 0 Carbohydrate binding domain DUF148 PF02520.17 ORF20549 - 0.016 15.3 1.1 0.024 14.7 1.1 1.3 1 1 0 1 1 1 0 Domain of unknown function DUF148 PRD PF00874.20 ORF20549 - 0.03 14.6 0.3 0.035 14.4 0.3 1.1 1 0 0 1 1 1 0 PRD domain CbiQ PF02361.16 ORF20526 - 0.056 13.1 0.6 0.058 13.0 0.6 1.0 1 0 0 1 1 1 0 Cobalt transport protein Fe-S_biosyn PF01521.20 ORF20119 - 3.3e-07 30.5 0.1 3.5e-07 30.4 0.1 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis Pkinase PF00069.25 ORF20095 - 0.23 10.8 0.0 0.29 10.5 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain Flavodoxin_2 PF02525.17 ORF19956 - 1.5e-07 31.3 0.0 1.7e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Speriolin_C PF15059.6 ORF19478 - 0.02 15.0 0.4 0.022 14.9 0.4 1.0 1 0 0 1 1 1 0 Speriolin C-terminus DUF1146 PF06612.11 ORF19042 - 0.099 12.7 0.2 0.55 10.3 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1146) DUF2631 PF10939.8 ORF18925 - 0.41 10.5 2.0 0.57 10.1 0.5 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2631) CDC48_2 PF02933.17 ORF18348 - 0.008 15.9 0.0 0.0099 15.6 0.0 1.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 SusD-like PF12741.7 ORF17720 - 0.12 11.2 0.1 0.13 11.1 0.1 1.0 1 0 0 1 1 1 0 Susd and RagB outer membrane lipoprotein Ilar_coat PF01787.16 ORF17596 - 0.1 12.4 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Ilarvirus coat protein Anthrax_toxA PF03497.16 ORF17459 - 0.0078 16.4 0.4 0.0081 16.3 0.4 1.0 1 0 0 1 1 1 1 Anthrax toxin LF subunit vMSA PF00695.19 ORF17326 - 0.062 12.4 0.2 0.071 12.2 0.2 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF2441 PF10386.9 ORF17326 - 0.11 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2441) zf-C3HC4_3 PF13920.6 ORF16282 - 0.043 13.7 0.1 0.059 13.2 0.1 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF1002 PF06207.11 ORF15987 - 0.26 10.8 0.0 0.28 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) DUF4579 PF15158.6 ORF14366 - 0.16 11.7 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) DUF2730 PF10805.8 ORF14270 - 0.059 13.5 0.1 0.084 13.0 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2730) RseC_MucC PF04246.12 ORF1416 - 0.17 11.8 0.8 0.2 11.6 0.8 1.0 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC TonB_dep_Rec PF00593.24 ORF14153 - 2.1e-12 47.7 1.0 2.2e-12 47.6 1.0 1.0 1 0 0 1 1 1 1 TonB dependent receptor EcoRII-C PF09019.11 ORF14073 - 0.15 12.1 0.3 0.19 11.8 0.3 1.1 1 0 0 1 1 1 0 EcoRII C terminal ACC_epsilon PF13822.6 ORF14073 - 0.5 11.1 5.5 0.67 10.7 5.3 1.3 1 1 0 1 1 1 0 Acyl-CoA carboxylase epsilon subunit UPF0236 PF06782.11 ORF13731 - 0.12 11.0 0.0 0.12 11.0 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0236) DIX PF00778.17 ORF13728 - 4.4e-05 23.2 0.1 5.3e-05 23.0 0.1 1.1 1 0 0 1 1 1 1 DIX domain TRI5 PF06330.11 ORF13638 - 0.00042 19.3 0.0 0.00048 19.1 0.0 1.0 1 0 0 1 1 1 1 Trichodiene synthase (TRI5) Colipase PF01114.18 ORF13580 - 0.015 15.0 0.8 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 Colipase, N-terminal domain Phage_tail_APC PF16778.5 ORF13093 - 0.031 14.1 0.1 0.039 13.8 0.1 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein CDC24_OB1 PF17246.2 ORF12910 - 0.067 13.3 0.2 0.079 13.1 0.2 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 1 DUF2116 PF09889.9 ORF12910 - 9.5 6.3 8.4 0.28 11.2 1.2 2.2 1 1 2 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DENN PF02141.21 ORF12299 - 1.9e-05 24.7 0.2 2.2e-05 24.5 0.2 1.1 1 0 0 1 1 1 1 DENN (AEX-3) domain DUF3950 PF13132.6 ORF11421 - 1 9.2 3.6 0.67 9.8 1.3 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3950) Antimicrobial_6 PF08036.11 ORF11301 - 0.046 13.8 0.2 2 8.5 0.0 2.1 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide DUF3464 PF11947.8 ORF1128 - 0.25 11.1 2.9 0.26 11.0 2.9 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Ski_Sno PF02437.17 ORF112273 - 0.017 14.9 0.5 2.7 7.8 0.1 2.1 2 0 0 2 2 2 0 SKI/SNO/DAC family COX2-transmemb PF09125.10 ORF111768 - 0.15 11.9 1.7 0.28 11.0 1.3 1.7 1 1 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane MORN PF02493.20 ORF110985 - 1.4e-19 68.8 24.1 7.3e-08 31.9 2.0 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF110985 - 0.044 13.5 4.5 2.7 7.8 0.3 2.6 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain Trehalose_PPase PF02358.16 ORF110826 - 0.091 11.9 0.0 0.091 11.9 0.0 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase SMYLE_N PF18615.1 ORF109790 - 0.025 14.2 2.3 0.027 14.1 2.3 1.1 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain ECSCR PF15820.5 ORF109494 - 0.35 10.7 3.7 0.4 10.5 3.7 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Phage_holin_3_6 PF07332.11 ORF109494 - 0.68 10.0 15.2 0.86 9.7 15.2 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3742 PF12553.8 ORF109494 - 0.88 9.7 4.7 1 9.5 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) DAGK_cat PF00781.24 ORF109173 - 8.1e-10 38.4 0.1 8.4e-10 38.3 0.1 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Pacifastin_I PF05375.13 ORF109091 - 0.08 12.7 3.8 0.08 12.7 3.8 1.7 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) Phage_GPD PF05954.11 ORF109079 - 0.037 13.3 0.1 0.037 13.3 0.1 1.1 1 0 0 1 1 1 0 Phage late control gene D protein (GPD) COX1 PF00115.20 ORF108837 - 1.6e-13 50.4 4.0 1.7e-13 50.2 4.0 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Phage_tail_APC PF16778.5 ORF108830 - 0.031 14.1 0.1 0.039 13.8 0.1 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein DUF2205 PF10224.9 ORF108648 - 5.3e-07 29.5 0.1 6e-07 29.4 0.1 1.1 1 0 0 1 1 1 1 Short coiled-coil protein CENP-H PF05837.12 ORF108648 - 0.014 15.8 0.0 0.015 15.7 0.0 1.0 1 0 0 1 1 1 0 Centromere protein H (CENP-H) YabA PF06156.13 ORF108648 - 0.017 15.8 0.0 0.017 15.7 0.0 1.1 1 0 0 1 1 1 0 Initiation control protein YabA SBF PF01758.16 ORF108630 - 0.0094 15.6 0.5 0.01 15.5 0.5 1.0 1 0 0 1 1 1 1 Sodium Bile acid symporter family Synaptobrevin PF00957.21 ORF108290 - 0.011 15.5 0.8 0.016 15.0 0.8 1.3 1 0 0 1 1 1 0 Synaptobrevin Osw5 PF17062.5 ORF108143 - 7 6.8 12.2 0.72 10.0 0.7 2.5 3 0 0 3 3 3 0 Outer spore wall 5 DUF5344 PF17279.2 ORF10771 - 0.011 16.3 1.1 0.016 15.8 1.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5344) YqaH PF17448.2 ORF10771 - 0.03 14.6 0.1 0.053 13.8 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized YqaH-like Abi_C PF14355.6 ORF10771 - 0.035 14.2 0.3 0.049 13.7 0.3 1.2 1 0 0 1 1 1 0 Abortive infection C-terminus Peptidase_S41_N PF11918.8 ORF10771 - 0.045 14.0 0.3 0.053 13.7 0.3 1.1 1 0 0 1 1 1 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP Dynamin_M PF01031.20 ORF10771 - 0.08 12.1 4.0 0.086 12.1 4.0 1.0 1 0 0 1 1 1 0 Dynamin central region Rop PF01815.16 ORF107604 - 7.7e-35 118.6 2.0 8.9e-35 118.3 2.0 1.0 1 0 0 1 1 1 1 Rop protein AZUL PF16558.5 ORF107575 - 0.2 12.0 0.1 0.31 11.3 0.1 1.4 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A DUF5388 PF17363.2 ORF107389 - 0.0044 17.2 0.3 0.0067 16.6 0.3 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5388) zf-C3HC PF07967.13 ORF107328 - 0.058 13.4 0.1 0.059 13.4 0.1 1.0 1 0 0 1 1 1 0 C3HC zinc finger-like LCD1 PF09798.9 ORF107109 - 0.24 9.9 8.7 0.27 9.7 8.7 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein Speriolin_C PF15059.6 ORF107016 - 0.086 13.0 0.6 0.092 12.9 0.6 1.0 1 0 0 1 1 1 0 Speriolin C-terminus DAGK_cat PF00781.24 ORF106585 - 8.1e-10 38.4 0.1 8.4e-10 38.3 0.1 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain PS-DH PF14765.6 ORF106089 - 0.0077 15.5 0.0 0.0085 15.4 0.0 1.1 1 0 0 1 1 1 1 Polyketide synthase dehydratase Ras PF00071.22 ORF106012 - 5.1e-23 81.5 0.1 5.5e-23 81.3 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF106012 - 4.2e-18 65.7 0.1 4.5e-18 65.6 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF106012 - 6.1e-05 23.1 0.0 7.1e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Arf PF00025.21 ORF106012 - 0.0002 20.9 0.1 0.00021 20.8 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family FeoB_N PF02421.18 ORF106012 - 0.02 14.4 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B AAA_21 PF13304.6 ORF106012 - 0.029 14.2 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Gtr1_RagA PF04670.12 ORF106012 - 0.036 13.4 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF1472 PF07339.12 ORF105780 - 0.023 15.2 1.0 0.024 15.2 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1472) UPF0242 PF06785.11 ORF105477 - 0.027 14.6 1.2 0.029 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4436 PF14494.6 ORF105461 - 0.17 11.1 2.3 0.19 11.0 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4436) Lectin_N PF03954.14 ORF105416 - 0.045 13.5 1.0 0.054 13.2 1.0 1.2 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain HPS6 PF15702.5 ORF105311 - 0.21 9.5 0.0 0.22 9.5 0.0 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein NYD-SP28 PF14772.6 ORF104745 - 0.00087 19.3 12.4 0.0016 18.4 12.4 1.6 1 1 0 1 1 1 1 Sperm tail Nup54 PF13874.6 ORF104745 - 0.026 14.6 8.4 0.028 14.5 8.4 1.0 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 COG6 PF06419.11 ORF104745 - 0.032 12.4 10.2 0.034 12.4 10.2 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 Bacillus_HBL PF05791.11 ORF104745 - 0.047 13.5 8.7 0.05 13.4 8.7 1.0 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) HAP1_N PF04849.13 ORF104745 - 0.17 11.1 13.2 0.19 10.9 13.2 1.0 1 0 0 1 1 1 0 HAP1 N-terminal conserved region HemX PF04375.14 ORF104745 - 0.46 9.7 8.3 0.47 9.7 8.3 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3552 PF12072.8 ORF104745 - 0.55 9.6 15.1 1.5 8.2 14.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) CENP-H PF05837.12 ORF104745 - 0.66 10.4 10.5 0.79 10.2 10.5 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Med9 PF07544.13 ORF104745 - 2.1 8.5 12.8 14 5.8 12.8 2.0 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 UPF0242 PF06785.11 ORF104745 - 2.1 8.4 15.2 2.2 8.4 15.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus OmpH PF03938.14 ORF104745 - 5.5 7.3 14.0 8.6 6.7 14.0 1.3 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) MRPL52 PF18699.1 ORF104745 - 6.6 7.0 11.4 7.6 6.8 10.9 1.4 1 1 0 1 1 1 0 Mitoribosomal protein mL52 Takusan PF04822.13 ORF104704 - 0.011 15.6 0.1 0.013 15.4 0.1 1.1 1 0 0 1 1 1 0 Takusan Mem_trans PF03547.18 ORF104620 - 7.9e-12 44.3 3.6 8.8e-12 44.1 3.6 1.0 1 0 0 1 1 1 1 Membrane transport protein DUF1295 PF06966.12 ORF104507 - 7.8e-21 74.7 0.0 7.8e-21 74.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF104507 - 5.3e-05 23.2 0.1 5.6e-05 23.2 0.1 1.0 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF104507 - 0.00029 21.2 0.0 0.00034 21.0 0.0 1.3 1 1 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF104507 - 0.026 14.9 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF104507 - 0.04 12.7 0.1 0.053 12.3 0.1 1.3 1 1 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family DUF5470 PF17564.2 ORF103755 - 0.11 12.7 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5470) Secretogranin_V PF05281.11 ORF103683 - 0.06 13.0 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 Neuroendocrine protein 7B2 precursor (Secretogranin V) TT_ORF2 PF02957.15 ORF103150 - 1.5 9.8 5.4 1.6 9.7 5.4 1.1 1 0 0 1 1 1 0 TT viral ORF2 Opiods_neuropep PF01160.18 ORF103087 - 0.064 13.4 2.5 0.1 12.7 2.5 1.4 1 0 0 1 1 1 0 Vertebrate endogenous opioids neuropeptide UPF0242 PF06785.11 ORF102910 - 0.027 14.6 1.2 0.029 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF1636 PF07845.11 ORF101827 - 0.066 13.7 0.1 0.069 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) RRM_1 PF00076.22 ORF101569 - 4.3e-06 26.5 0.0 5.3e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF898 PF05987.13 ORF101444 - 0.084 11.9 0.1 0.093 11.8 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) Colipase_C PF02740.14 ORF101278 - 0.31 11.2 1.9 0.54 10.5 1.9 1.3 1 0 0 1 1 1 0 Colipase, C-terminal domain EF-hand_6 PF13405.6 ORF101187 - 7.7e-08 31.7 0.1 0.0049 16.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF101187 - 1.6e-05 24.1 0.0 0.11 12.1 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF101187 - 0.00031 21.1 0.1 0.029 14.8 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF101187 - 0.0035 16.8 0.1 0.99 9.0 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF101187 - 0.0094 15.8 0.1 0.48 10.3 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain pair Antimicrobial_6 PF08036.11 ORF101187 - 0.13 12.4 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide YwcE PF17368.2 ORF100863 - 0.022 15.4 0.2 0.033 14.9 0.2 1.2 1 1 0 1 1 1 0 Spore morphogenesis and germination YwcE HTH_22 PF13309.6 ORF100455 - 0.16 12.1 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 HTH domain DUF4363 PF14276.6 ORF100234 - 0.048 13.8 0.3 0.088 12.9 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4363) Mago_nashi PF02792.14 NODE_72825_length_217_cov_0.818681_g64884_i0reverse_frame_1 - 0.037 14.1 0.1 0.041 14.0 0.1 1.0 1 0 0 1 1 1 0 Mago nashi protein DUF896 PF05979.12 NODE_72825_length_217_cov_0.818681_g64884_i0reverse_frame_1 - 0.043 13.7 0.2 0.083 12.8 0.2 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF896) CwfJ_C_1 PF04677.15 NODE_72819_length_217_cov_0.873626_g64878_i0forward_frame_1 - 1.7e-10 40.8 0.0 1.7e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 KNTase_C PF07827.11 NODE_72813_length_217_cov_0.879121_g64872_i0reverse_frame_1 - 0.032 14.0 0.0 0.035 13.9 0.0 1.0 1 0 0 1 1 1 0 KNTase C-terminal domain CMD PF02627.20 NODE_72811_length_217_cov_0.879121_g64870_i0reverse_frame_1 - 0.017 15.2 0.2 0.017 15.1 0.2 1.1 1 0 0 1 1 1 0 Carboxymuconolactone decarboxylase family Colicin-DNase PF12639.7 NODE_72811_length_217_cov_0.879121_g64870_i0reverse_frame_1 - 0.11 13.3 0.0 0.12 13.3 0.0 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin PLA2_inh PF02988.15 NODE_72800_length_217_cov_0.934066_g64859_i0forward_frame_1 - 0.024 15.3 0.0 0.025 15.2 0.0 1.1 1 0 0 1 1 1 0 Phospholipase A2 inhibitor Nse4-Nse3_bdg PF15412.6 NODE_72797_length_217_cov_0.978022_g64856_i0forward_frame_1 - 0.0099 16.0 0.1 0.021 14.9 0.0 1.6 2 1 0 2 2 2 1 Binding domain of Nse4/EID3 to Nse3-MAGE Toxin_14 PF07829.11 NODE_72791_length_217_cov_1.043956_g64850_i0forward_frame_1 - 0.12 12.3 2.9 0.22 11.5 2.9 1.4 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein TadE PF07811.12 NODE_72789_length_217_cov_1.071429_g64848_i0reverse_frame_1 - 5.2 7.4 7.5 4.8 7.6 1.5 2.2 2 0 0 2 2 2 0 TadE-like protein Viral_env_E26 PF11050.8 NODE_72788_length_217_cov_1.076923_g64847_i0forward_frame_1 - 0.07 12.5 0.2 0.075 12.4 0.2 1.0 1 0 0 1 1 1 0 Virus envelope protein E26 WD40 PF00400.32 NODE_72787_length_217_cov_1.082418_g64846_i0reverse_frame_1 - 6.7e-06 26.8 0.1 0.18 12.7 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat Roc PF08477.13 NODE_72784_length_217_cov_1.093407_g64843_i0reverse_frame_1 - 0.0013 18.9 0.0 0.0016 18.6 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_72784_length_217_cov_1.093407_g64843_i0reverse_frame_1 - 0.19 11.3 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Ras family Androgen_recep PF02166.16 NODE_72780_length_217_cov_1.120879_g64839_i0reverse_frame_1 - 0.8 8.5 5.5 0.92 8.3 5.5 1.0 1 0 0 1 1 1 0 Androgen receptor Lactamase_B_4 PF13691.6 NODE_72779_length_217_cov_1.126374_g64838_i0reverse_frame_1 - 2.7e-11 43.0 0.1 3.4e-11 42.7 0.1 1.1 1 0 0 1 1 1 1 tRNase Z endonuclease Syndecan PF01034.20 NODE_72779_length_217_cov_1.126374_g64838_i0forward_frame_1 - 0.039 13.9 0.6 0.059 13.3 0.6 1.4 1 1 0 1 1 1 0 Syndecan domain Cuticle_2 PF08184.11 NODE_72775_length_217_cov_1.164835_g64834_i0reverse_frame_1 - 0.029 14.4 0.1 0.051 13.6 0.1 1.4 1 0 0 1 1 1 0 Cuticle protein 7 isoform family DUF3217 PF11506.8 NODE_72775_length_217_cov_1.164835_g64834_i0reverse_frame_1 - 0.039 13.9 0.3 0.06 13.3 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3217) Monellin PF09200.10 NODE_72775_length_217_cov_1.164835_g64834_i0reverse_frame_1 - 0.072 12.9 0.1 1.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Monellin NDC10_II PF16787.5 NODE_72770_length_217_cov_1.208791_g64829_i0reverse_frame_1 - 0.094 11.8 0.0 0.11 11.6 0.0 1.0 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit, domain 2 TGF_beta_GS PF08515.12 NODE_72760_length_217_cov_1.280220_g64819_i0forward_frame_1 - 0.61 9.6 0.1 0.61 9.6 0.1 2.4 1 1 1 2 2 2 0 Transforming growth factor beta type I GS-motif DUF4630 PF15443.6 NODE_72760_length_217_cov_1.280220_g64819_i0forward_frame_1 - 0.72 10.0 4.7 1.2 9.3 4.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4630) Cgr1 PF03879.14 NODE_72753_length_217_cov_1.313187_g64812_i0reverse_frame_1 - 0.005 17.2 8.2 0.0057 17.0 8.2 1.1 1 0 0 1 1 1 1 Cgr1 family DUF3630 PF12305.8 NODE_72749_length_217_cov_1.318681_g64808_i0reverse_frame_1 - 0.089 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3630) Aft1_HRA PF11786.8 NODE_72746_length_217_cov_1.318681_g64805_i0forward_frame_1 - 0.075 13.4 0.1 0.097 13.0 0.1 1.3 1 1 0 1 1 1 0 Aft1 HRA domain BLOC1_2 PF10046.9 NODE_72741_length_217_cov_1.324176_g64800_i0reverse_frame_1 - 0.011 16.0 0.3 0.014 15.7 0.3 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Atg31 PF09795.9 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_1 - 0.013 15.5 2.8 0.015 15.3 2.7 1.3 1 1 0 1 1 1 0 Autophagy-related protein 31 IQ PF00612.27 NODE_72730_length_217_cov_1.384615_g64789_i0reverse_frame_1 - 0.036 13.9 0.1 0.036 13.9 0.1 3.3 3 1 0 3 3 3 0 IQ calmodulin-binding motif MBA1 PF07961.11 NODE_72730_length_217_cov_1.384615_g64789_i0reverse_frame_1 - 0.077 12.0 1.0 0.087 11.9 1.0 1.1 1 0 0 1 1 1 0 MBA1-like protein DUF3716 PF12511.8 NODE_72720_length_217_cov_1.467033_g64779_i0forward_frame_1 - 0.13 12.3 6.3 0.17 11.9 6.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3716) FGAR-AT_N PF18076.1 NODE_72717_length_217_cov_1.478022_g64776_i0forward_frame_1 - 0.013 15.5 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase N-terminal NODP PF07684.12 NODE_72710_length_217_cov_1.538462_g64769_i0reverse_frame_1 - 0.47 10.6 3.8 2.9 8.1 3.8 2.0 1 1 0 1 1 1 0 NOTCH protein Spt20 PF12090.8 NODE_72710_length_217_cov_1.538462_g64769_i0forward_frame_1 - 4.9 6.7 12.5 5.9 6.4 12.5 1.0 1 0 0 1 1 1 0 Spt20 family Peptidase_S9_N PF02897.15 NODE_72700_length_217_cov_1.587912_g64759_i0forward_frame_1 - 0.12 11.1 0.1 0.12 11.1 0.1 1.0 1 0 0 1 1 1 0 Prolyl oligopeptidase, N-terminal beta-propeller domain MORN PF02493.20 NODE_72693_length_217_cov_1.642857_g64752_i0reverse_frame_1 - 0.00017 21.2 0.5 0.0004 20.1 0.5 1.6 1 0 0 1 1 1 1 MORN repeat Kinesin PF00225.23 NODE_72687_length_217_cov_1.708791_g64746_i0reverse_frame_1 - 9.3e-09 34.6 0.0 1e-08 34.5 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_72687_length_217_cov_1.708791_g64746_i0reverse_frame_1 - 0.0039 17.1 0.0 0.0061 16.5 0.0 1.3 1 0 0 1 1 1 1 Microtubule binding Metallophos PF00149.28 NODE_72685_length_217_cov_1.719780_g64744_i0forward_frame_1 - 0.067 13.7 0.0 0.079 13.4 0.0 1.0 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase DsrD PF08679.11 NODE_72684_length_217_cov_1.725275_g64743_i0reverse_frame_1 - 0.18 12.1 0.2 9.5 6.6 0.0 2.1 2 0 0 2 2 2 0 Dissimilatory sulfite reductase D (DsrD) zf-C4_Topoisom PF01396.19 NODE_72676_length_217_cov_1.752747_g64735_i0forward_frame_1 - 0.0028 17.4 0.1 0.0044 16.8 0.1 1.4 1 0 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger DUF3136 PF11334.8 NODE_72672_length_217_cov_1.752747_g64731_i0reverse_frame_1 - 0.17 11.7 0.1 0.26 11.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) DUF1673 PF07895.11 NODE_72670_length_217_cov_1.752747_g64729_i0reverse_frame_1 - 0.05 13.3 2.2 0.054 13.2 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) Tmemb_9 PF05434.11 NODE_72670_length_217_cov_1.752747_g64729_i0reverse_frame_1 - 0.3 11.0 1.2 0.47 10.4 1.2 1.3 1 0 0 1 1 1 0 TMEM9 PhoQ_Sensor PF08918.10 NODE_72668_length_217_cov_1.758242_g64727_i0forward_frame_1 - 0.065 13.1 0.0 0.073 12.9 0.0 1.1 1 0 0 1 1 1 0 PhoQ Sensor Sclerostin PF05463.11 NODE_72666_length_217_cov_1.758242_g64725_i0forward_frame_1 - 0.21 11.3 4.1 0.33 10.6 4.1 1.4 1 1 0 1 1 1 0 Sclerostin (SOST) Med30 PF11315.8 NODE_72657_length_217_cov_1.884615_g64716_i0forward_frame_1 - 0.018 15.3 0.9 0.02 15.1 0.9 1.0 1 0 0 1 1 1 0 Mediator complex subunit 30 Baculo_gp64 PF03273.13 NODE_72649_length_217_cov_1.928571_g64708_i0forward_frame_1 - 0.0089 14.9 0.9 0.0094 14.8 0.9 1.0 1 0 0 1 1 1 1 Baculovirus gp64 envelope glycoprotein family KxDL PF10241.9 NODE_72649_length_217_cov_1.928571_g64708_i0forward_frame_1 - 0.045 14.0 0.5 0.061 13.6 0.5 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein zf-RING_5 PF14634.6 NODE_72648_length_217_cov_1.934066_g64707_i0reverse_frame_1 - 0.00066 19.6 3.7 0.00086 19.2 3.7 1.2 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_72648_length_217_cov_1.934066_g64707_i0reverse_frame_1 - 0.0016 18.2 3.1 0.0028 17.5 3.1 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 DUF3772 PF12607.8 NODE_72648_length_217_cov_1.934066_g64707_i0reverse_frame_1 - 0.12 12.1 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) zf-RING_2 PF13639.6 NODE_72648_length_217_cov_1.934066_g64707_i0reverse_frame_1 - 0.19 12.1 6.7 0.34 11.3 6.7 1.5 1 1 0 1 1 1 0 Ring finger domain Ribos_L4_asso_C PF14374.6 NODE_72646_length_217_cov_1.967033_g64705_i0reverse_frame_1 - 0.038 14.0 0.4 0.054 13.6 0.4 1.2 1 0 0 1 1 1 0 60S ribosomal protein L4 C-terminal domain OapA_N PF08525.11 NODE_72645_length_217_cov_1.967033_g64704_i0reverse_frame_1 - 0.067 13.1 0.6 8 6.5 0.2 2.4 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif UPF0014 PF03649.13 NODE_72643_length_217_cov_2.005495_g64702_i0forward_frame_1 - 0.015 14.7 1.5 0.017 14.5 1.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0014) DUF1987 PF09345.10 NODE_72639_length_217_cov_2.054945_g64698_i0reverse_frame_1 - 0.066 12.9 0.2 0.071 12.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) DUF5447 PF17525.2 NODE_72638_length_217_cov_2.060440_g64697_i0reverse_frame_1 - 0.097 13.1 2.0 0.37 11.3 0.5 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5447) CDC27 PF09507.10 NODE_72637_length_217_cov_2.065934_g64696_i0reverse_frame_1 - 3.4 7.0 7.1 3.8 6.8 7.1 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 DUF3756 PF12581.8 NODE_72634_length_217_cov_2.076923_g64693_i0forward_frame_1 - 0.14 12.1 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3756) PKD_channel PF08016.12 NODE_72632_length_217_cov_2.104396_g64691_i0reverse_frame_1 - 0.041 12.5 0.0 0.046 12.4 0.0 1.1 1 0 0 1 1 1 0 Polycystin cation channel T4-Gluco-transf PF09198.10 NODE_72631_length_217_cov_2.115385_g64690_i0reverse_frame_1 - 0.2 11.3 0.6 1.1 8.9 0.6 2.1 1 1 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase PNRC PF15365.6 NODE_72621_length_217_cov_2.192308_g64680_i0forward_frame_1 - 0.11 12.4 0.5 0.22 11.4 0.5 1.5 1 0 0 1 1 1 0 Proline-rich nuclear receptor coactivator motif RIBIOP_C PF04950.12 NODE_72620_length_217_cov_2.203297_g64679_i0reverse_frame_1 - 4.4e-07 29.6 0.0 4.6e-07 29.6 0.0 1.0 1 0 0 1 1 1 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal DUF1656 PF07869.12 NODE_72618_length_217_cov_2.307692_g64677_i0reverse_frame_1 - 0.011 15.8 1.4 0.015 15.3 1.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1656) Peptidase_C41 PF05417.11 NODE_72611_length_217_cov_2.406593_g64670_i0reverse_frame_1 - 0.0028 17.5 0.1 0.0029 17.4 0.1 1.1 1 0 0 1 1 1 1 Hepatitis E cysteine protease zf-C2H2_8 PF15909.5 NODE_72611_length_217_cov_2.406593_g64670_i0reverse_frame_1 - 0.012 15.9 0.2 0.014 15.6 0.2 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon Glyco_transf_9 PF01075.17 NODE_72607_length_217_cov_2.478022_g64666_i0forward_frame_1 - 1.5e-09 37.5 0.0 1.6e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Aa_trans PF01490.18 NODE_72604_length_217_cov_2.516484_g64663_i0reverse_frame_1 - 0.00014 20.7 0.3 0.00014 20.7 0.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 NODE_72604_length_217_cov_2.516484_g64663_i0reverse_frame_1 - 0.018 14.1 0.2 0.018 14.1 0.2 1.0 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family DUF3188 PF11384.8 NODE_72603_length_217_cov_2.521978_g64662_i0forward_frame_1 - 0.061 13.0 0.1 0.087 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3188) EVI2A PF05399.11 NODE_72602_length_217_cov_2.538462_g64661_i0reverse_frame_1 - 0.24 11.0 1.3 0.39 10.3 1.3 1.3 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) DUF4714 PF15833.5 NODE_72593_length_217_cov_2.736264_g64652_i0reverse_frame_1 - 0.015 15.3 0.1 0.016 15.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) HTH_psq PF05225.16 NODE_72588_length_217_cov_2.780220_g64647_i0reverse_frame_1 - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 helix-turn-helix, Psq domain Mtp PF03821.16 NODE_72583_length_217_cov_2.961538_g64642_i0forward_frame_1 - 0.013 15.1 0.6 0.015 14.9 0.6 1.2 1 0 0 1 1 1 0 Golgi 4-transmembrane spanning transporter DUF5350 PF17299.2 NODE_72582_length_217_cov_2.961538_g64641_i0forward_frame_1 - 0.17 12.4 0.0 0.22 12.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5350) DUF3089 PF11288.8 NODE_72578_length_217_cov_3.098901_g64637_i0reverse_frame_1 - 0.087 12.4 0.4 0.093 12.3 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) OKR_DC_1 PF01276.20 NODE_72578_length_217_cov_3.098901_g64637_i0forward_frame_1 - 1.6e-22 79.8 0.3 1.8e-22 79.7 0.3 1.0 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain CK_II_beta PF01214.18 NODE_72572_length_217_cov_3.351648_g64631_i0reverse_frame_1 - 0.037 13.8 0.1 0.045 13.6 0.1 1.1 1 0 0 1 1 1 0 Casein kinase II regulatory subunit KH_4 PF13083.6 NODE_72571_length_217_cov_3.423077_g64630_i0reverse_frame_1 - 0.051 13.4 0.0 0.23 11.4 0.1 1.8 2 0 0 2 2 2 0 KH domain Toxin_14 PF07829.11 NODE_72570_length_217_cov_3.461538_g64629_i0reverse_frame_1 - 0.26 11.3 4.7 0.38 10.7 4.7 1.2 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein Bombesin PF02044.17 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_1 - 0.041 14.0 0.2 0.078 13.1 0.2 1.5 1 0 0 1 1 1 0 Bombesin-like peptide Peptidase_S78_2 PF14550.6 NODE_72568_length_217_cov_3.516484_g64627_i0reverse_frame_1 - 0.078 13.1 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 Putative phage serine protease XkdF AmoC PF04896.12 NODE_72564_length_217_cov_4.324176_g64623_i0reverse_frame_1 - 0.094 12.0 0.3 0.098 11.9 0.3 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C DUF743 PF05332.11 NODE_72563_length_217_cov_4.950549_g64622_i0reverse_frame_1 - 0.061 13.4 0.1 0.069 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF743) ACP_PD PF04336.12 NODE_72559_length_217_cov_8.906593_g64618_i0forward_frame_1 - 0.084 13.3 0.0 0.094 13.1 0.0 1.1 1 0 0 1 1 1 0 Acyl carrier protein phosphodiesterase TSGP1 PF07771.11 NODE_72557_length_217_cov_22.285714_g64616_i0forward_frame_1 - 0.0024 18.0 0.0 0.003 17.7 0.0 1.1 1 0 0 1 1 1 1 Tick salivary peptide group 1 SRP14 PF02290.15 NODE_72541_length_217_cov_38.648352_g64600_i0reverse_frame_1 - 4.2e-10 39.8 0.0 4.2e-10 39.8 0.0 1.6 2 0 0 2 2 2 1 Signal recognition particle 14kD protein AKAP7_RIRII_bdg PF10470.9 NODE_72525_length_217_cov_50.560440_g64584_i0forward_frame_1 - 0.095 12.8 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 PKA-RI-RII subunit binding domain of A-kinase anchor protein GST_C_2 PF13410.6 NODE_72512_length_217_cov_69.835165_g64571_i0forward_frame_1 - 0.097 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain LRR_4 PF12799.7 NODE_72502_length_217_cov_98.670330_g64561_i0forward_frame_1 - 0.05 14.1 0.2 0.18 12.3 0.1 1.9 1 1 1 2 2 2 0 Leucine Rich repeats (2 copies) YMF19 PF02326.15 NODE_72500_length_217_cov_112.719780_g64559_i0reverse_frame_1 - 0.014 16.2 1.6 0.015 16.1 1.6 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 Amnionless PF14828.6 NODE_72498_length_217_cov_123.368132_g64557_i0forward_frame_1 - 0.064 12.1 0.3 0.072 11.9 0.3 1.0 1 0 0 1 1 1 0 Amnionless NapE PF06796.11 NODE_72486_length_217_cov_327.467033_g64545_i0reverse_frame_1 - 0.15 11.6 0.5 0.22 11.0 0.5 1.3 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE Glycolytic PF00274.19 NODE_72484_length_217_cov_9919.653846_g64543_i0forward_frame_1 - 1.7e-21 76.4 0.0 1.8e-21 76.3 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I YfiO PF13525.6 NODE_72484_length_217_cov_9919.653846_g64543_i0forward_frame_1 - 0.15 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Outer membrane lipoprotein GnHR_trans PF12369.8 NODE_72473_length_218_cov_0.874317_g64532_i0reverse_frame_1 - 0.02 15.7 0.0 0.031 15.1 0.0 1.4 1 1 0 1 1 1 0 Gonadotropin hormone receptor transmembrane region GcnA_N PF18229.1 NODE_72472_length_218_cov_0.874317_g64531_i0reverse_frame_1 - 0.02 14.9 0.0 0.022 14.8 0.0 1.1 1 0 0 1 1 1 0 N-acetyl-beta-D-glucosaminidase N-terminal domain SelP_N PF04592.14 NODE_72471_length_218_cov_0.874317_g64530_i0forward_frame_1 - 0.24 10.8 10.5 0.25 10.7 10.5 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region ADH_N PF08240.12 NODE_72468_length_218_cov_0.874317_g64527_i0reverse_frame_1 - 0.081 12.8 0.0 0.085 12.8 0.0 1.1 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain Gpi16 PF04113.14 NODE_72467_length_218_cov_0.874317_g64526_i0forward_frame_1 - 0.086 11.3 0.0 0.088 11.2 0.0 1.1 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component His_Phos_1 PF00300.22 NODE_72466_length_218_cov_0.874317_g64525_i0forward_frame_1 - 0.00054 19.7 0.0 0.00054 19.7 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DUF4833 PF16117.5 NODE_72466_length_218_cov_0.874317_g64525_i0forward_frame_1 - 0.052 13.6 0.1 0.065 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4833) DUF3263 PF11662.8 NODE_72465_length_218_cov_0.874317_g64524_i0reverse_frame_1 - 0.085 12.7 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3263) DUF3804 PF12707.7 NODE_72449_length_218_cov_1.081967_g64508_i0forward_frame_1 - 0.062 13.0 0.3 0.064 13.0 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3804) DUF1622 PF07784.11 NODE_72441_length_218_cov_1.169399_g64500_i0forward_frame_1 - 0.11 12.5 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1622) AflR PF08493.10 NODE_72432_length_218_cov_1.245902_g64491_i0reverse_frame_1 - 0.12 11.8 3.3 0.15 11.5 3.3 1.0 1 0 0 1 1 1 0 Aflatoxin regulatory protein UPF0220 PF05255.11 NODE_72430_length_218_cov_1.256831_g64489_i0reverse_frame_1 - 0.032 13.8 0.1 0.035 13.7 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) RNase_H PF00075.24 NODE_72421_length_218_cov_1.300546_g64480_i0forward_frame_1 - 2.4e-05 24.6 0.0 3.1e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 RNase H Leader_CPA1 PF08252.11 NODE_72418_length_218_cov_1.300546_g64477_i0forward_frame_1 - 0.085 12.3 0.1 0.16 11.4 0.1 1.4 1 0 0 1 1 1 0 arg-2/CPA1 leader peptide SirB PF04247.12 NODE_72417_length_218_cov_1.300546_g64476_i0reverse_frame_1 - 0.34 11.0 9.8 0.42 10.7 9.8 1.1 1 0 0 1 1 1 0 Invasion gene expression up-regulator, SirB MTCP1 PF08991.10 NODE_72409_length_218_cov_1.306011_g64468_i0forward_frame_1 - 0.018 15.3 0.7 0.036 14.3 0.4 1.6 2 0 0 2 2 2 0 Mature-T-Cell Proliferation I type # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks332.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks332.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks332.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks332.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:08:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3975 PF13126.6 NODE_72391_length_218_cov_1.333333_g64450_i0forward_frame_1 - 0.33 11.4 4.1 0.38 11.2 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) Bap31 PF05529.12 NODE_72390_length_218_cov_1.360656_g64449_i0forward_frame_1 - 0.043 13.7 0.0 0.051 13.4 0.0 1.0 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region S_100 PF01023.19 NODE_72379_length_218_cov_1.426230_g64438_i0forward_frame_1 - 0.03 14.0 1.5 0.21 11.3 0.1 2.0 2 0 0 2 2 2 0 S-100/ICaBP type calcium binding domain DUF5014 PF16406.5 NODE_72364_length_218_cov_1.519126_g64423_i0reverse_frame_1 - 0.017 15.4 0.1 0.018 15.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5014) SWC7 PF17330.2 NODE_72361_length_218_cov_1.530055_g64420_i0forward_frame_1 - 0.088 12.9 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 SWR1 chromatin-remodelling complex, sub-unit Swc7 DUF3973 PF13119.6 NODE_72360_length_218_cov_1.530055_g64419_i0reverse_frame_1 - 0.2 11.8 0.0 0.44 10.7 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3973) MOZ_SAS PF01853.18 NODE_72357_length_218_cov_1.530055_g64416_i0forward_frame_1 - 0.015 14.9 0.1 0.016 14.9 0.1 1.1 1 0 0 1 1 1 0 MOZ/SAS family SCAB_CC PF16712.5 NODE_72357_length_218_cov_1.530055_g64416_i0forward_frame_1 - 0.087 12.7 0.1 0.099 12.5 0.1 1.0 1 0 0 1 1 1 0 Coiled-coil regions of plant-specific actin-binding protein Tricho_coat PF05892.11 NODE_72351_length_218_cov_1.562842_g64410_i0forward_frame_1 - 0.079 12.7 0.0 0.081 12.7 0.0 1.1 1 0 0 1 1 1 0 Trichovirus coat protein DUF865 PF05906.11 NODE_72341_length_218_cov_1.644809_g64400_i0forward_frame_1 - 0.012 15.4 3.0 0.033 14.0 3.0 1.8 1 0 0 1 1 1 0 Herpesvirus-7 repeat of unknown function (DUF865) Lamprin PF06403.11 NODE_72335_length_218_cov_1.666667_g64394_i0forward_frame_1 - 3.2 7.7 7.2 19 5.2 7.2 2.0 1 1 0 1 1 1 0 Lamprin YaaC PF14175.6 NODE_72326_length_218_cov_1.732240_g64385_i0forward_frame_1 - 0.029 13.6 2.6 0.031 13.5 2.6 1.0 1 0 0 1 1 1 0 YaaC-like Protein HEPN_LA2681 PF18733.1 NODE_72325_length_218_cov_1.743169_g64384_i0reverse_frame_1 - 0.0031 16.8 3.2 0.0031 16.8 3.2 1.1 1 0 0 1 1 1 1 LA2681-like HEPN LANC_like PF05147.13 NODE_72322_length_218_cov_1.748634_g64381_i0reverse_frame_1 - 0.061 11.9 0.0 0.066 11.8 0.0 1.0 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein Troponin-I_N PF11636.8 NODE_72312_length_218_cov_1.803279_g64371_i0forward_frame_1 - 0.08 12.9 0.9 0.13 12.2 0.9 1.3 1 0 0 1 1 1 0 Troponin I residues 1-32 OKR_DC_1 PF01276.20 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 2e-34 119.1 0.2 2.1e-34 119.0 0.2 1.0 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Beta_elim_lyase PF01212.21 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 0.0009 18.6 0.1 0.0009 18.6 0.1 1.0 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 0.0034 16.4 0.0 0.0036 16.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V NLPC_P60 PF00877.19 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 0.08 13.0 0.0 0.088 12.8 0.0 1.1 1 0 0 1 1 1 0 NlpC/P60 family DUF5590 PF17881.1 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 0.1 12.7 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5590) Holin_BlyA PF05102.12 NODE_72283_length_218_cov_2.169399_g64342_i0forward_frame_1 - 6.8 6.7 13.1 13 5.9 6.3 2.1 1 1 1 2 2 2 0 holin, BlyA family FrhB_FdhB_N PF04422.13 NODE_72282_length_218_cov_2.185792_g64341_i0forward_frame_1 - 0.039 14.1 0.0 0.045 13.9 0.0 1.1 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term SLR1-BP PF07333.12 NODE_72281_length_218_cov_2.202186_g64340_i0forward_frame_1 - 0.01 16.2 3.5 0.01 16.2 3.5 1.6 2 0 0 2 2 2 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) UPF0139 PF03669.13 NODE_72276_length_218_cov_2.284153_g64335_i0forward_frame_1 - 0.043 13.7 0.8 0.049 13.5 0.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) DUF2258 PF10015.9 NODE_72270_length_218_cov_2.377049_g64329_i0reverse_frame_1 - 0.12 12.5 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2258) DUF3278 PF11683.8 NODE_72268_length_218_cov_2.393443_g64327_i0reverse_frame_1 - 0.0047 17.0 2.5 0.0055 16.8 2.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3278) DUF2633 PF11119.8 NODE_72268_length_218_cov_2.393443_g64327_i0reverse_frame_1 - 4.3 7.3 7.4 8.1 6.4 7.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Sgf11 PF08209.11 NODE_72263_length_218_cov_2.540984_g64322_i0forward_frame_1 - 0.016 14.8 0.1 0.025 14.1 0.1 1.3 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) zf-CHY PF05495.12 NODE_72263_length_218_cov_2.540984_g64322_i0forward_frame_1 - 0.084 13.4 3.6 0.19 12.2 3.6 1.6 1 1 0 1 1 1 0 CHY zinc finger Nucleo_LEF-12 PF06256.11 NODE_72261_length_218_cov_2.601093_g64320_i0reverse_frame_1 - 0.012 15.3 0.4 0.015 15.1 0.4 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus LEF-12 protein BCHF PF07284.11 NODE_72259_length_218_cov_2.617486_g64318_i0forward_frame_1 - 0.071 13.1 1.3 0.084 12.9 1.3 1.1 1 0 0 1 1 1 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) CoxIIa PF08113.11 NODE_72259_length_218_cov_2.617486_g64318_i0forward_frame_1 - 0.15 11.9 2.8 0.33 10.8 2.8 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IIa family Dpy19 PF10034.9 NODE_72259_length_218_cov_2.617486_g64318_i0forward_frame_1 - 0.54 8.4 5.8 0.55 8.4 5.8 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation RolB_RolC PF02027.17 NODE_72257_length_218_cov_2.715847_g64316_i0reverse_frame_1 - 0.072 12.8 0.0 0.073 12.7 0.0 1.0 1 0 0 1 1 1 0 RolB/RolC glucosidase family DUF4269 PF14091.6 NODE_72257_length_218_cov_2.715847_g64316_i0forward_frame_1 - 0.03 14.6 0.1 0.035 14.4 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) DUF4407 PF14362.6 NODE_72249_length_218_cov_3.027322_g64308_i0reverse_frame_1 - 0.17 11.2 2.6 0.19 11.1 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1454 PF07305.12 NODE_72247_length_218_cov_3.109290_g64306_i0reverse_frame_1 - 0.011 15.3 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1454) CRAL_TRIO PF00650.20 NODE_72241_length_218_cov_3.617486_g64300_i0forward_frame_1 - 0.00045 20.0 0.0 0.00054 19.7 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain UCH PF00443.29 NODE_72233_length_218_cov_6.704918_g64292_i0reverse_frame_1 - 4e-12 46.2 0.0 4.6e-12 46.0 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF4604 PF15377.6 NODE_72228_length_218_cov_26.617486_g64287_i0reverse_frame_1 - 0.4 11.1 15.4 0.44 11.0 15.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) RNA_polI_A34 PF08208.11 NODE_72228_length_218_cov_26.617486_g64287_i0reverse_frame_1 - 0.43 10.6 16.1 0.51 10.4 16.1 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Copine PF07002.16 NODE_72225_length_218_cov_30.765027_g64284_i0reverse_frame_1 - 0.00054 19.5 0.0 0.00062 19.3 0.0 1.1 1 0 0 1 1 1 1 Copine Cadherin_tail PF15974.5 NODE_72223_length_218_cov_31.224044_g64282_i0reverse_frame_1 - 1.5 9.1 7.3 2.7 8.3 6.3 1.7 1 1 1 2 2 2 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region LAGLIDADG_2 PF03161.13 NODE_72220_length_218_cov_36.306011_g64279_i0reverse_frame_1 - 0.073 13.1 1.9 0.086 12.9 1.9 1.0 1 0 0 1 1 1 0 LAGLIDADG DNA endonuclease family AAA_9 PF12781.7 NODE_72217_length_218_cov_43.803279_g64276_i0forward_frame_1 - 3.8e-22 78.5 0.1 4.5e-22 78.3 0.1 1.0 1 0 0 1 1 1 1 ATP-binding dynein motor region ERGIC_N PF13850.6 NODE_72212_length_218_cov_47.978142_g64271_i0forward_frame_1 - 0.017 15.5 0.0 0.019 15.3 0.0 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Phospholamban PF04272.14 NODE_72212_length_218_cov_47.978142_g64271_i0forward_frame_1 - 0.16 11.5 2.8 0.22 11.0 2.8 1.2 1 0 0 1 1 1 0 Phospholamban SWIM PF04434.17 NODE_72201_length_218_cov_70.349727_g64260_i0forward_frame_1 - 0.0081 15.8 0.1 0.011 15.4 0.1 1.3 1 0 0 1 1 1 1 SWIM zinc finger XPA_N PF01286.18 NODE_72199_length_218_cov_71.404372_g64258_i0forward_frame_1 - 2.6 8.2 6.1 0.67 10.0 0.5 2.1 2 0 0 2 2 2 0 XPA protein N-terminal NIT PF08376.10 NODE_72198_length_218_cov_71.989071_g64257_i0forward_frame_1 - 0.031 14.8 0.0 0.031 14.7 0.0 1.0 1 0 0 1 1 1 0 Nitrate and nitrite sensing LuxT_C PF18285.1 NODE_72195_length_218_cov_91.754098_g64254_i0reverse_frame_1 - 0.092 13.3 0.2 0.12 12.9 0.2 1.2 1 0 0 1 1 1 0 Tetracycline repressor LuxT C-terminal domain DUF5434 PF17502.2 NODE_72169_length_219_cov_0.869565_g64228_i0reverse_frame_1 - 0.012 15.6 0.6 0.012 15.6 0.6 1.3 2 0 0 2 2 2 0 Family of unknown function (DUF5434) Cloacin PF03515.14 NODE_72169_length_219_cov_0.869565_g64228_i0reverse_frame_1 - 0.29 10.8 2.2 0.35 10.5 2.2 1.0 1 0 0 1 1 1 0 Colicin-like bacteriocin tRNase domain ATP-grasp PF02222.22 NODE_72166_length_219_cov_0.869565_g64225_i0reverse_frame_1 - 0.00015 21.4 0.0 0.00016 21.3 0.0 1.0 1 0 0 1 1 1 1 ATP-grasp domain LEA_4 PF02987.16 NODE_72160_length_219_cov_0.869565_g64219_i0reverse_frame_1 - 0.0052 16.8 11.5 0.011 15.9 11.5 1.6 1 0 0 1 1 1 1 Late embryogenesis abundant protein DUF883 PF05957.13 NODE_72160_length_219_cov_0.869565_g64219_i0reverse_frame_1 - 0.011 16.3 5.5 0.013 16.1 5.5 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Flagellin_N PF00669.20 NODE_72160_length_219_cov_0.869565_g64219_i0reverse_frame_1 - 0.041 14.0 2.1 0.048 13.8 2.1 1.2 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region Spore_II_R PF09551.10 NODE_72160_length_219_cov_0.869565_g64219_i0reverse_frame_1 - 0.34 11.4 2.7 0.39 11.2 2.7 1.0 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) DUF1828 PF08861.10 NODE_72136_length_219_cov_1.086957_g64195_i0forward_frame_1 - 0.084 13.2 0.1 0.11 12.7 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function DUF1828 DUF3120 PF11318.8 NODE_72136_length_219_cov_1.086957_g64195_i0forward_frame_1 - 0.098 13.0 0.0 0.098 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) DUF244 PF03112.14 NODE_72126_length_219_cov_1.190217_g64185_i0reverse_frame_1 - 0.025 14.5 0.5 0.027 14.3 0.5 1.1 1 0 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF DUF5540 PF17694.1 NODE_72121_length_219_cov_1.233696_g64180_i0reverse_frame_1 - 0.021 15.3 0.2 0.021 15.3 0.2 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5540) RRN9 PF10680.9 NODE_72113_length_219_cov_1.282609_g64172_i0reverse_frame_1 - 0.025 14.8 0.3 0.026 14.8 0.3 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor DUF523 PF04463.12 NODE_72111_length_219_cov_1.288043_g64170_i0forward_frame_1 - 0.015 15.3 0.0 0.016 15.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF523) YabA PF06156.13 NODE_72104_length_219_cov_1.298913_g64163_i0forward_frame_1 - 0.056 14.1 0.4 0.068 13.8 0.4 1.2 1 0 0 1 1 1 0 Initiation control protein YabA Phage-Gp8 PF09215.10 NODE_72102_length_219_cov_1.304348_g64161_i0reverse_frame_1 - 0.039 13.0 0.0 0.041 12.9 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage T4, Gp8 Peptidase_Mx PF15887.5 NODE_72102_length_219_cov_1.304348_g64161_i0reverse_frame_1 - 0.15 11.4 0.0 0.18 11.2 0.0 1.0 1 0 0 1 1 1 0 Putative zinc-binding metallo-peptidase Peptidase_A24 PF01478.18 NODE_72093_length_219_cov_1.304348_g64152_i0forward_frame_1 - 0.036 14.5 0.5 0.044 14.2 0.5 1.1 1 0 0 1 1 1 0 Type IV leader peptidase family DUF2575 PF10837.8 NODE_72084_length_219_cov_1.369565_g64143_i0forward_frame_1 - 0.087 13.1 0.0 0.099 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2575) Pkinase PF00069.25 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 4.3e-13 49.2 1.7 5.1e-13 49.0 1.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 2e-08 33.8 0.4 2.2e-08 33.7 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.024 14.2 0.1 0.025 14.2 0.1 1.0 1 0 0 1 1 1 0 RIO1 family YrbL-PhoP_reg PF10707.9 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.029 13.9 0.1 0.031 13.8 0.1 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Kdo PF06293.14 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.038 13.3 0.0 0.038 13.3 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.039 13.5 2.1 0.29 10.7 0.2 2.0 1 1 1 2 2 2 0 Choline/ethanolamine kinase APH PF01636.23 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.14 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family NAD_binding_11 PF14833.6 NODE_72070_length_219_cov_1.418478_g64129_i0reverse_frame_1 - 0.1 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PBP5_C PF07943.13 NODE_72065_length_219_cov_1.456522_g64124_i0reverse_frame_1 - 0.00043 20.5 0.0 0.00059 20.0 0.0 1.2 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain CDPS PF16715.5 NODE_72065_length_219_cov_1.456522_g64124_i0reverse_frame_1 - 0.14 11.8 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Cyclodipeptide synthase EspF PF04806.12 NODE_72064_length_219_cov_1.467391_g64123_i0forward_frame_1 - 0.014 15.8 1.9 0.014 15.8 1.9 1.7 2 0 0 2 2 2 0 EspF protein repeat LRRNT PF01462.18 NODE_72057_length_219_cov_1.500000_g64116_i0forward_frame_1 - 0.011 15.3 1.0 0.017 14.8 1.0 1.3 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain ECM1 PF05782.11 NODE_72052_length_219_cov_1.521739_g64111_i0forward_frame_1 - 0.0069 15.4 0.0 0.0076 15.2 0.0 1.0 1 0 0 1 1 1 1 Extracellular matrix protein 1 (ECM1) YrzO PF14142.6 NODE_72048_length_219_cov_1.543478_g64107_i0forward_frame_1 - 0.056 13.3 0.4 0.087 12.7 0.4 1.4 1 0 0 1 1 1 0 YrzO-like protein PARP PF00644.20 NODE_72046_length_219_cov_1.565217_g64105_i0forward_frame_1 - 0.017 14.7 0.1 0.037 13.6 0.0 1.6 1 1 1 2 2 2 0 Poly(ADP-ribose) polymerase catalytic domain DUF3976 PF13121.6 NODE_72039_length_219_cov_1.592391_g64098_i0reverse_frame_1 - 0.12 12.5 0.6 0.2 11.8 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3976) zf-CCCH_8 PF18633.1 NODE_72012_length_219_cov_1.739130_g64071_i0forward_frame_1 - 0.2 11.8 1.3 3.3 7.9 0.0 2.9 3 0 0 3 3 3 0 Zinc-finger antiviral protein (ZAP) zinc finger domain 3 DUF1974 PF09317.11 NODE_72011_length_219_cov_1.739130_g64070_i0forward_frame_1 - 0.0067 16.0 0.2 0.0077 15.8 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1974) WHAMM-JMY_N PF15920.5 NODE_72010_length_219_cov_1.750000_g64069_i0reverse_frame_1 - 0.02 14.8 0.1 0.028 14.3 0.1 1.2 1 0 0 1 1 1 0 N-terminal of Junction-mediating and WASP homolog-associated RMF PF04957.12 NODE_72010_length_219_cov_1.750000_g64069_i0reverse_frame_1 - 0.029 14.6 0.1 0.04 14.1 0.1 1.1 1 0 0 1 1 1 0 Ribosome modulation factor zf-C2H2_3 PF13878.6 NODE_72009_length_219_cov_1.750000_g64068_i0reverse_frame_1 - 0.019 14.8 2.4 0.023 14.5 2.4 1.2 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO Latarcin PF10279.9 NODE_72008_length_219_cov_1.755435_g64067_i0forward_frame_1 - 0.064 13.7 0.1 0.076 13.4 0.1 1.2 1 0 0 1 1 1 0 Latarcin precursor PAPA-1 PF04795.12 NODE_72008_length_219_cov_1.755435_g64067_i0forward_frame_1 - 0.076 13.8 0.1 0.081 13.7 0.1 1.1 1 0 0 1 1 1 0 PAPA-1-like conserved region AbrB_C PF18277.1 NODE_72001_length_219_cov_1.826087_g64060_i0reverse_frame_1 - 0.027 14.1 0.1 0.042 13.5 0.1 1.2 1 0 0 1 1 1 0 AbrB C-terminal domain PspB PF06667.12 NODE_71999_length_219_cov_1.831522_g64058_i0forward_frame_1 - 7.3 6.7 7.2 4 7.6 5.4 1.5 1 1 0 1 1 1 0 Phage shock protein B PfkB PF00294.24 NODE_71984_length_219_cov_1.956522_g64043_i0forward_frame_1 - 5.4e-08 32.5 0.0 5.6e-08 32.4 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 NODE_71984_length_219_cov_1.956522_g64043_i0forward_frame_1 - 0.17 11.2 0.0 0.29 10.5 0.0 1.5 1 1 0 1 1 1 0 Phosphomethylpyrimidine kinase ALG3 PF05208.13 NODE_71981_length_219_cov_2.016304_g64040_i0reverse_frame_1 - 0.0011 18.5 1.2 0.0026 17.3 1.4 1.5 1 1 0 1 1 1 1 ALG3 protein Putative_PNPOx PF01243.20 NODE_71978_length_219_cov_2.032609_g64037_i0reverse_frame_1 - 0.14 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase Methyltransf_25 PF13649.6 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.0019 18.8 0.0 0.0033 18.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.0052 16.3 0.0 0.0065 16.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.19 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.078 13.1 0.0 0.089 12.9 0.0 1.1 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.092 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.093 12.6 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain EZH2_N PF18601.1 NODE_71962_length_219_cov_2.309783_g64021_i0reverse_frame_1 - 0.097 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 EZH2 N-terminal domain HEAT_2 PF13646.6 NODE_71961_length_219_cov_2.358696_g64020_i0forward_frame_1 - 3.8e-07 30.4 0.1 2.1e-06 28.1 0.0 1.8 1 1 1 2 2 2 1 HEAT repeats HEAT PF02985.22 NODE_71961_length_219_cov_2.358696_g64020_i0forward_frame_1 - 4.6e-05 23.3 1.9 0.26 11.7 0.0 2.9 3 0 0 3 3 3 2 HEAT repeat HEAT_PBS PF03130.16 NODE_71961_length_219_cov_2.358696_g64020_i0forward_frame_1 - 0.0011 19.5 0.1 0.002 18.6 0.0 1.5 2 0 0 2 2 2 1 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 NODE_71961_length_219_cov_2.358696_g64020_i0forward_frame_1 - 0.0055 17.2 0.1 3.4 8.3 0.0 2.3 2 1 0 2 2 2 2 HEAT-like repeat ketoacyl-synt PF00109.26 NODE_71960_length_219_cov_2.364130_g64019_i0forward_frame_1 - 9.9e-21 74.5 0.6 1e-20 74.4 0.6 1.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Thiolase_N PF00108.23 NODE_71960_length_219_cov_2.364130_g64019_i0forward_frame_1 - 2.1e-07 30.6 0.4 2.5e-07 30.4 0.4 1.0 1 0 0 1 1 1 1 Thiolase, N-terminal domain Bac_small_YrzI PF09501.10 NODE_71958_length_219_cov_2.380435_g64017_i0forward_frame_1 - 0.014 15.5 0.3 0.018 15.2 0.3 1.1 1 0 0 1 1 1 0 Probable sporulation protein (Bac_small_yrzI) DUF2013 PF09431.10 NODE_71957_length_219_cov_2.391304_g64016_i0reverse_frame_1 - 0.011 15.9 0.8 0.012 15.8 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2013) FtsH_ext PF06480.15 NODE_71955_length_219_cov_2.483696_g64014_i0reverse_frame_1 - 0.056 13.8 0.5 0.056 13.8 0.5 1.5 1 1 1 2 2 2 0 FtsH Extracellular WD40 PF00400.32 NODE_71952_length_219_cov_2.652174_g64011_i0reverse_frame_1 - 0.0065 17.3 0.0 0.0098 16.7 0.0 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat ELYS-bb PF16687.5 NODE_71952_length_219_cov_2.652174_g64011_i0reverse_frame_1 - 0.069 11.8 0.0 0.07 11.7 0.0 1.0 1 0 0 1 1 1 0 beta-propeller of ELYS nucleoporin ANAPC4_WD40 PF12894.7 NODE_71952_length_219_cov_2.652174_g64011_i0reverse_frame_1 - 0.095 13.0 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain AgrD PF05931.11 NODE_71949_length_219_cov_2.907609_g64008_i0forward_frame_1 - 0.037 14.0 0.1 0.052 13.6 0.1 1.3 1 0 0 1 1 1 0 Staphylococcal AgrD protein MAS20 PF02064.15 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_1 - 0.42 10.7 8.2 0.64 10.1 8.2 1.3 1 0 0 1 1 1 0 MAS20 protein import receptor cNMP_binding PF00027.29 NODE_71942_length_219_cov_3.309783_g64001_i0reverse_frame_1 - 4.1e-12 46.0 0.1 4.7e-12 45.8 0.1 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Cupin_2 PF07883.11 NODE_71942_length_219_cov_3.309783_g64001_i0reverse_frame_1 - 0.015 15.0 0.3 0.034 13.8 0.3 1.7 1 1 0 1 1 1 0 Cupin domain Ribosomal_S30AE PF02482.19 NODE_71939_length_219_cov_3.434783_g63998_i0forward_frame_1 - 0.11 13.3 0.0 0.12 13.1 0.0 1.1 1 0 0 1 1 1 0 Sigma 54 modulation protein / S30EA ribosomal protein SDF PF00375.18 NODE_71923_length_219_cov_20.554348_g63982_i0reverse_frame_1 - 8 5.4 10.7 8.9 5.2 10.7 1.1 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family CofC PF01983.16 NODE_71918_length_219_cov_32.722826_g63977_i0reverse_frame_1 - 0.033 13.4 0.5 0.037 13.2 0.5 1.0 1 0 0 1 1 1 0 Guanylyl transferase CofC like DUF3624 PF12292.8 NODE_71917_length_219_cov_32.853261_g63976_i0forward_frame_1 - 0.0053 17.1 1.3 0.007 16.7 1.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3624) ASXH PF13919.6 NODE_71914_length_219_cov_34.070652_g63973_i0reverse_frame_1 - 0.0062 16.6 1.2 0.0076 16.3 1.2 1.1 1 0 0 1 1 1 1 Asx homology domain MAP17 PF15807.5 NODE_71911_length_219_cov_35.559783_g63970_i0reverse_frame_1 - 0.06 13.6 2.3 0.068 13.4 2.3 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Connexin PF00029.19 NODE_71911_length_219_cov_35.559783_g63970_i0reverse_frame_1 - 0.97 9.1 4.9 1 9.0 4.9 1.0 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_71911_length_219_cov_35.559783_g63970_i0reverse_frame_1 - 1.2 7.8 2.7 1.2 7.8 2.7 1.1 1 0 0 1 1 1 0 Presenilin DUF5560 PF17715.1 NODE_71910_length_219_cov_37.603261_g63969_i0forward_frame_1 - 0.079 12.4 0.9 0.11 12.0 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) Ycf70 PF17382.2 NODE_71909_length_219_cov_37.782609_g63968_i0reverse_frame_1 - 0.014 15.8 1.1 0.014 15.8 1.1 1.6 1 1 1 2 2 2 0 Uncharacterized Ycf70-like PDR_CDR PF06422.12 NODE_71909_length_219_cov_37.782609_g63968_i0reverse_frame_1 - 1.3 8.9 7.5 4.4 7.3 1.1 2.1 1 1 1 2 2 2 0 CDR ABC transporter zf-RING_2 PF13639.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 3.9e-10 39.9 1.7 5e-10 39.6 1.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 2.9e-09 36.6 1.7 3.6e-09 36.3 1.7 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 1.9e-08 34.4 2.1 2.5e-08 34.1 2.1 1.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 7.7e-08 32.2 1.1 1.2e-07 31.6 1.1 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 1e-06 28.5 1.4 1.4e-06 28.0 1.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 4.6e-06 26.4 0.9 5.5e-06 26.1 0.9 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.00022 21.3 3.0 0.00035 20.7 3.0 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.00097 19.0 0.8 0.0013 18.6 0.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.0012 18.8 0.7 0.0017 18.3 0.7 1.2 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.0014 18.4 3.5 0.0045 16.8 3.0 1.9 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 U-box PF04564.15 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.0027 17.9 0.0 0.0043 17.2 0.0 1.3 1 0 0 1 1 1 1 U-box domain zf-ANAPC11 PF12861.7 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.0028 17.7 0.1 0.0031 17.5 0.1 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Erg28 PF03694.13 NODE_71897_length_219_cov_44.402174_g63956_i0reverse_frame_1 - 0.0083 16.5 0.3 0.01 16.2 0.3 1.1 1 0 0 1 1 1 1 Erg28 like protein Toxin_16 PF07945.11 NODE_71878_length_219_cov_77.679348_g63937_i0forward_frame_1 - 0.068 13.1 0.8 0.068 13.1 0.8 1.6 2 0 0 2 2 2 0 Janus-atracotoxin Rtt106_N PF18215.1 NODE_71874_length_219_cov_86.478261_g63933_i0forward_frame_1 - 0.21 11.3 0.0 0.35 10.7 0.0 1.4 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain Mannosyl_trans PF05007.13 NODE_71870_length_219_cov_92.073826_g63929_i0forward_frame_1 - 0.032 14.1 0.8 0.032 14.1 0.8 1.1 1 0 0 1 1 1 0 Mannosyltransferase (PIG-M) DUF347 PF03988.12 NODE_71866_length_219_cov_118.630435_g63925_i0forward_frame_1 - 0.057 13.6 1.9 0.11 12.8 1.9 1.5 1 0 0 1 1 1 0 Repeat of Unknown Function (DUF347) zf-C3HC4_4 PF15227.6 NODE_71863_length_219_cov_125.695652_g63922_i0reverse_frame_1 - 0.034 14.3 0.7 0.054 13.7 0.7 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING Tristanin_u2 PF16638.5 NODE_71858_length_219_cov_143.375000_g63917_i0reverse_frame_1 - 0.18 12.6 8.2 0.26 12.1 8.2 1.3 1 0 0 1 1 1 0 Unstructured region on methyltransferase between zinc-fingers Pept_tRNA_hydro PF01195.19 NODE_71855_length_219_cov_165.907609_g63914_i0reverse_frame_1 - 0.11 12.5 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase Coagulin PF02035.15 NODE_71854_length_219_cov_167.179348_g63913_i0forward_frame_1 - 0.079 12.8 0.0 0.093 12.6 0.0 1.1 1 0 0 1 1 1 0 Coagulin MOZ_SAS PF01853.18 NODE_71845_length_219_cov_126178.125000_g63904_i0reverse_frame_1 - 0.034 13.8 1.4 0.036 13.7 1.4 1.1 1 0 0 1 1 1 0 MOZ/SAS family SP_C-Propep PF08999.10 NODE_71842_length_220_cov_0.848649_g63901_i0forward_frame_3 - 4.9 7.0 12.2 8.6 6.2 12.2 1.5 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide HemY_N PF07219.13 NODE_71842_length_220_cov_0.848649_g63901_i0forward_frame_2 - 0.27 11.4 3.7 0.35 11.1 3.7 1.1 1 0 0 1 1 1 0 HemY protein N-terminus Chromo_2 PF18704.1 NODE_71835_length_220_cov_0.864865_g63894_i0forward_frame_3 - 0.022 15.0 0.0 0.024 14.9 0.0 1.1 1 0 0 1 1 1 0 Chromatin organization modifier domain 2 REV PF00424.18 NODE_71834_length_220_cov_0.864865_g63893_i0reverse_frame_3 - 0.06 13.4 0.8 0.07 13.1 0.8 1.1 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) S4 PF01479.25 NODE_71831_length_220_cov_0.864865_g63890_i0reverse_frame_3 - 0.031 14.0 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 S4 domain Filamin PF00630.19 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 2.6e-05 25.0 0.0 2.9e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Filamin/ABP280 repeat Cadherin_5 PF17892.1 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 7.6e-05 22.6 0.6 7.6e-05 22.6 0.6 1.1 1 0 0 1 1 1 1 Cadherin-like domain Invasin_D3 PF09134.10 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 7.6e-05 22.9 0.7 8.8e-05 22.7 0.7 1.1 1 0 0 1 1 1 1 Invasin, domain 3 BclA_C PF18573.1 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 7.7e-05 22.6 1.2 8.4e-05 22.5 1.2 1.1 1 0 0 1 1 1 1 BclA C-terminal domain Big_9 PF17963.1 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 0.011 16.5 0.9 0.011 16.4 0.9 1.1 1 0 0 1 1 1 0 Bacterial Ig domain FAM75 PF14650.6 NODE_71826_length_220_cov_0.929730_g63885_i0reverse_frame_3 - 0.0077 15.8 0.9 0.0084 15.7 0.9 1.0 1 0 0 1 1 1 1 FAM75 family NICE-1 PF15845.5 NODE_71824_length_220_cov_0.945946_g63883_i0forward_frame_3 - 0.075 13.8 10.7 0.087 13.6 10.7 1.1 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family BAT PF15915.5 NODE_71822_length_220_cov_0.989189_g63881_i0forward_frame_2 - 0.087 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 GAF and HTH_10 associated domain GidB PF02527.15 NODE_71821_length_220_cov_0.994595_g63880_i0forward_frame_3 - 3.9e-20 72.0 0.1 4.2e-20 71.8 0.1 1.0 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G SAWADEE PF16719.5 NODE_71817_length_220_cov_1.027027_g63876_i0forward_frame_2 - 0.17 11.9 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 SAWADEE domain DUF2062 PF09835.9 NODE_71810_length_220_cov_1.059459_g63869_i0reverse_frame_2 - 0.12 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) FKS1_dom1 PF14288.6 NODE_71806_length_220_cov_1.081081_g63865_i0forward_frame_3 - 0.028 14.7 0.3 0.032 14.6 0.3 1.2 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 Lamprin PF06403.11 NODE_71804_length_220_cov_1.102703_g63863_i0reverse_frame_3 - 0.0011 18.9 4.3 0.0011 18.9 4.3 1.1 1 0 0 1 1 1 1 Lamprin ADH_N_assoc PF13823.6 NODE_71802_length_220_cov_1.151351_g63861_i0reverse_frame_2 - 0.14 12.1 0.1 18 5.4 0.0 2.2 2 0 0 2 2 2 0 Alcohol dehydrogenase GroES-associated Pox_D5 PF03288.16 NODE_71802_length_220_cov_1.151351_g63861_i0forward_frame_2 - 0.027 15.0 0.0 0.028 14.9 0.0 1.1 1 0 0 1 1 1 0 Poxvirus D5 protein-like TPP_enzyme_C PF02775.21 NODE_71797_length_220_cov_1.183784_g63856_i0reverse_frame_2 - 0.062 13.1 0.0 0.08 12.7 0.0 1.2 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SCF PF02404.15 NODE_71795_length_220_cov_1.200000_g63854_i0reverse_frame_3 - 0.0042 16.5 0.1 0.0043 16.4 0.1 1.0 1 0 0 1 1 1 1 Stem cell factor Dioxygenase_C PF00775.21 NODE_71791_length_220_cov_1.237838_g63850_i0reverse_frame_2 - 0.036 13.5 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 Dioxygenase DUF4575 PF15143.6 NODE_71786_length_220_cov_1.270270_g63845_i0reverse_frame_3 - 0.0026 17.9 1.2 0.0028 17.9 1.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4575) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks333.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks333.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks333.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks333.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Type2_restr_D3 PF16902.5 NODE_71776_length_220_cov_1.297297_g63835_i0forward_frame_3 - 0.17 11.9 0.0 0.23 11.4 0.0 1.4 1 1 0 1 1 1 0 Type-2 restriction enzyme D3 domain zf-CHC2 PF01807.20 NODE_71775_length_220_cov_1.297297_g63834_i0forward_frame_2 - 0.0051 16.6 0.0 0.0062 16.3 0.0 1.2 1 0 0 1 1 1 1 CHC2 zinc finger Aconitase PF00330.20 NODE_71771_length_220_cov_1.297297_g63830_i0forward_frame_2 - 0.086 11.8 0.2 0.096 11.7 0.2 1.0 1 0 0 1 1 1 0 Aconitase family (aconitate hydratase) DUF4236 PF14020.6 NODE_71770_length_220_cov_1.297297_g63829_i0reverse_frame_3 - 0.016 15.8 1.2 0.35 11.5 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4236) MbtH PF03621.13 NODE_71767_length_220_cov_1.297297_g63826_i0reverse_frame_3 - 0.078 12.4 0.1 0.13 11.8 0.0 1.5 2 0 0 2 2 2 0 MbtH-like protein MSC PF09402.10 NODE_71761_length_220_cov_1.340541_g63820_i0reverse_frame_2 - 0.0045 16.5 0.8 0.0046 16.5 0.8 1.0 1 0 0 1 1 1 1 Man1-Src1p-C-terminal domain DUF3611 PF12263.8 NODE_71761_length_220_cov_1.340541_g63820_i0reverse_frame_2 - 0.026 14.4 0.5 0.032 14.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) HemY_N PF07219.13 NODE_71761_length_220_cov_1.340541_g63820_i0reverse_frame_2 - 0.38 11.0 3.7 0.45 10.7 3.7 1.3 1 1 0 1 1 1 0 HemY protein N-terminus OFeT_1 PF16955.5 NODE_71761_length_220_cov_1.340541_g63820_i0reverse_frame_2 - 0.48 10.1 5.2 0.72 9.5 5.2 1.5 1 1 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter DUF2569 PF10754.9 NODE_71761_length_220_cov_1.340541_g63820_i0forward_frame_3 - 0.57 10.6 8.9 0.73 10.3 8.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2569) Peptidase_A24 PF01478.18 NODE_71760_length_220_cov_1.345946_g63819_i0forward_frame_2 - 0.11 12.9 1.7 0.15 12.5 1.7 1.3 1 1 0 1 1 1 0 Type IV leader peptidase family DUF3481 PF11980.8 NODE_71752_length_220_cov_1.389189_g63811_i0reverse_frame_2 - 0.15 11.8 0.7 0.15 11.8 0.7 2.3 2 1 1 3 3 3 0 C-terminal domain of neuropilin glycoprotein DUF2614 PF11023.8 NODE_71752_length_220_cov_1.389189_g63811_i0reverse_frame_2 - 0.71 10.0 4.8 0.57 10.3 3.9 1.3 1 1 0 1 1 1 0 Zinc-ribbon containing domain zf-RING_UBOX PF13445.6 NODE_71749_length_220_cov_1.400000_g63808_i0reverse_frame_3 - 0.015 15.3 1.2 0.021 14.9 1.2 1.3 1 0 0 1 1 1 0 RING-type zinc-finger FAM176 PF14851.6 NODE_71749_length_220_cov_1.400000_g63808_i0reverse_frame_3 - 0.19 11.4 0.6 0.21 11.3 0.6 1.1 1 0 0 1 1 1 0 FAM176 family Pox_A14 PF05767.12 NODE_71749_length_220_cov_1.400000_g63808_i0forward_frame_3 - 0.043 14.0 0.4 0.069 13.3 0.2 1.4 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 SR-25 PF10500.9 NODE_71748_length_220_cov_1.410811_g63807_i0reverse_frame_2 - 0.26 10.9 5.9 0.28 10.8 5.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Herpes_pp85 PF04637.12 NODE_71748_length_220_cov_1.410811_g63807_i0reverse_frame_2 - 0.73 8.2 6.9 0.67 8.3 6.9 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Lamprin PF06403.11 NODE_71746_length_220_cov_1.421622_g63805_i0forward_frame_3 - 0.0062 16.5 1.1 0.0076 16.2 1.1 1.1 1 0 0 1 1 1 1 Lamprin DUF4244 PF14029.6 NODE_71741_length_220_cov_1.443243_g63800_i0reverse_frame_2 - 0.26 10.7 1.8 0.35 10.4 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4244) DUF3045 PF11243.8 NODE_71740_length_220_cov_1.443243_g63799_i0reverse_frame_3 - 0.037 14.2 1.2 0.063 13.4 1.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3045) Toprim_Crpt PF13342.6 NODE_71738_length_220_cov_1.443243_g63797_i0forward_frame_3 - 0.14 12.2 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 C-terminal repeat of topoisomerase GatB_N PF02934.15 NODE_71735_length_220_cov_1.502703_g63794_i0forward_frame_2 - 0.018 14.5 0.2 0.019 14.4 0.2 1.0 1 0 0 1 1 1 0 GatB/GatE catalytic domain Ribosomal_L1 PF00687.21 NODE_71731_length_220_cov_1.513514_g63790_i0reverse_frame_3 - 4.8e-10 39.5 0.0 4.9e-10 39.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family CitMHS PF03600.16 NODE_71729_length_220_cov_1.513514_g63788_i0forward_frame_3 - 0.011 14.9 8.8 0.013 14.7 8.8 1.0 1 0 0 1 1 1 0 Citrate transporter MatC_N PF07158.11 NODE_71729_length_220_cov_1.513514_g63788_i0forward_frame_3 - 0.029 14.4 3.8 0.032 14.3 3.8 1.0 1 0 0 1 1 1 0 Dicarboxylate carrier protein MatC N-terminus FixS PF03597.15 NODE_71729_length_220_cov_1.513514_g63788_i0forward_frame_3 - 8.8 6.1 8.2 0.7 9.6 2.6 2.0 2 1 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type Leader_Trp PF08255.11 NODE_71729_length_220_cov_1.513514_g63788_i0forward_frame_2 - 0.025 14.5 0.9 0.09 12.8 0.9 1.9 1 0 0 1 1 1 0 Trp-operon Leader Peptide DUF4750 PF15938.5 NODE_71728_length_220_cov_1.518919_g63787_i0reverse_frame_2 - 0.13 12.0 0.1 3 7.6 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) UCH PF00443.29 NODE_71725_length_220_cov_1.545946_g63784_i0reverse_frame_2 - 0.052 13.0 0.0 0.052 13.0 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase DUF5548 PF17702.1 NODE_71725_length_220_cov_1.545946_g63784_i0reverse_frame_2 - 0.074 12.8 0.0 0.081 12.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5548) TcpA PF05946.12 NODE_71724_length_220_cov_1.556757_g63783_i0reverse_frame_2 - 0.059 13.5 0.1 0.059 13.5 0.1 1.1 1 0 0 1 1 1 0 Toxin-coregulated pilus subunit TcpA Med6 PF04934.14 NODE_71721_length_220_cov_1.600000_g63780_i0reverse_frame_2 - 0.029 14.2 0.3 0.029 14.2 0.3 1.1 1 0 0 1 1 1 0 MED6 mediator sub complex component Lamprin PF06403.11 NODE_71719_length_220_cov_1.621622_g63778_i0forward_frame_3 - 0.042 13.8 1.3 0.049 13.6 1.3 1.1 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_71719_length_220_cov_1.621622_g63778_i0forward_frame_2 - 0.0011 18.9 0.0 0.0012 18.8 0.0 1.0 1 0 0 1 1 1 1 Lamprin UPF0093 PF03653.13 NODE_71718_length_220_cov_1.621622_g63777_i0reverse_frame_3 - 0.041 14.1 0.1 0.044 14.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) T6SS_VipA PF05591.12 NODE_71717_length_220_cov_1.627027_g63776_i0forward_frame_2 - 9.6e-13 48.2 0.4 9.9e-13 48.2 0.4 1.0 1 0 0 1 1 1 1 Type VI secretion system, VipA, VC_A0107 or Hcp2 F_actin_bind PF08919.10 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.001 19.1 1.1 0.001 19.1 1.1 1.5 1 1 1 2 2 2 1 F-actin binding DivIC PF04977.15 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.0017 18.1 6.2 0.013 15.3 1.9 2.0 1 1 1 2 2 2 1 Septum formation initiator TPR_MLP1_2 PF07926.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.0036 17.3 6.4 0.0044 17.1 6.4 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein DUF5344 PF17279.2 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.0073 16.9 6.1 0.018 15.6 6.1 1.6 1 1 0 1 1 1 1 Family of unknown function (DUF5344) OGG_N PF07934.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.011 15.9 0.7 0.011 15.8 0.7 1.1 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain BRX_N PF13713.6 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.027 14.2 0.0 6.6 6.6 0.0 2.4 2 0 0 2 2 2 0 Transcription factor BRX N-terminal domain Occludin_ELL PF07303.13 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.031 15.0 0.9 0.034 14.9 0.9 1.1 1 0 0 1 1 1 0 Occludin homology domain TcdB_N PF12918.7 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.05 13.9 5.4 0.067 13.5 0.3 2.5 1 1 1 2 2 2 0 TcdB toxin N-terminal helical domain ERp29 PF07749.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.053 14.4 1.9 1.2 10.0 0.2 2.0 2 0 0 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain FlxA PF14282.6 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.077 13.0 15.0 0.13 12.3 12.1 2.0 1 1 1 2 2 2 0 FlxA-like protein YabA PF06156.13 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.14 12.8 3.4 0.26 11.9 0.9 2.0 1 1 0 1 1 1 0 Initiation control protein YabA ACCA PF03255.14 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.18 11.7 1.6 0.28 11.0 1.6 1.4 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ApbE PF02424.15 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.21 11.1 1.2 0.23 11.0 1.2 1.1 1 0 0 1 1 1 0 ApbE family DUF3450 PF11932.8 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.21 10.9 6.7 0.24 10.7 6.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Mem_trans PF03547.18 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.33 9.3 1.7 0.35 9.2 1.7 1.0 1 0 0 1 1 1 0 Membrane transport protein MbeD_MobD PF04899.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.35 11.0 5.7 0.51 10.5 2.5 2.1 1 1 1 2 2 2 0 MbeD/MobD like LPP PF04728.13 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.78 10.2 13.9 12 6.4 0.5 3.0 1 1 1 2 2 2 0 Lipoprotein leucine-zipper SlyX PF04102.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 1.3 9.7 5.1 73 4.1 5.1 2.3 1 1 0 1 1 1 0 SlyX TolA_bind_tri PF16331.5 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 1.9 8.6 9.8 0.63 10.2 3.3 2.3 1 1 1 2 2 2 0 TolA binding protein trimerisation Biliv-reduc_cat PF09166.10 NODE_71715_length_220_cov_1.664865_g63774_i0forward_frame_2 - 0.082 13.2 0.2 0.091 13.1 0.2 1.1 1 0 0 1 1 1 0 Biliverdin reductase, catalytic V-set_2 PF15910.5 NODE_71713_length_220_cov_1.670270_g63772_i0forward_frame_2 - 0.16 12.0 0.1 0.27 11.3 0.1 1.3 1 0 0 1 1 1 0 ICOS V-set domain RAMP4 PF06624.12 NODE_71711_length_220_cov_1.675676_g63770_i0forward_frame_2 - 0.0097 15.9 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 Ribosome associated membrane protein RAMP4 PRRSV_Env PF02340.15 NODE_71709_length_220_cov_1.686486_g63768_i0forward_frame_3 - 0.059 12.8 0.4 0.062 12.7 0.4 1.0 1 0 0 1 1 1 0 PRRSV putative envelope protein BTRD1 PF17660.1 NODE_71708_length_220_cov_1.697297_g63767_i0reverse_frame_3 - 0.14 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial tandem repeat domain 1 APO_RNA-bind PF05634.11 NODE_71702_length_220_cov_1.724324_g63761_i0reverse_frame_3 - 0.12 11.8 0.1 0.12 11.7 0.1 1.0 1 0 0 1 1 1 0 APO RNA-binding DUF3881 PF12997.7 NODE_71701_length_220_cov_1.724324_g63760_i0reverse_frame_3 - 0.0085 15.4 0.1 0.0098 15.2 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function, E. rectale Gene description (DUF3881) DUF16 PF01519.16 NODE_71696_length_220_cov_1.729730_g63755_i0forward_frame_3 - 0.035 14.6 0.6 0.037 14.5 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF16 GBP PF02263.19 NODE_71693_length_220_cov_1.756757_g63752_i0reverse_frame_2 - 7e-16 58.3 1.2 8.1e-16 58.1 1.2 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain MC1 PF05854.11 NODE_71690_length_220_cov_1.783784_g63749_i0reverse_frame_3 - 0.18 12.1 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 Non-histone chromosomal protein MC1 CAF1 PF04857.20 NODE_71684_length_220_cov_1.837838_g63743_i0reverse_frame_3 - 7.2e-05 22.1 0.0 7.5e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 CAF1 family ribonuclease GBP_PSP PF02425.15 NODE_71679_length_220_cov_1.908108_g63738_i0forward_frame_3 - 0.043 13.5 0.4 0.082 12.6 0.4 1.5 1 0 0 1 1 1 0 Paralytic/GBP/PSP peptide DUF2982 PF11201.8 NODE_71676_length_220_cov_1.940541_g63735_i0reverse_frame_3 - 0.085 12.4 0.0 0.095 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2982) Mod_r PF07200.13 NODE_71675_length_220_cov_1.945946_g63734_i0reverse_frame_2 - 0.012 15.8 0.9 0.012 15.7 0.9 1.0 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Muted PF14942.6 NODE_71675_length_220_cov_1.945946_g63734_i0reverse_frame_2 - 0.033 14.5 0.5 0.038 14.3 0.5 1.0 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Oxidored_molyb PF00174.19 NODE_71674_length_220_cov_1.951351_g63733_i0forward_frame_2 - 0.16 11.6 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain YmaF PF12788.7 NODE_71668_length_220_cov_2.043243_g63727_i0reverse_frame_3 - 0.016 15.7 0.0 0.019 15.5 0.0 1.1 1 0 0 1 1 1 0 YmaF family GAGBD PF16828.5 NODE_71664_length_220_cov_2.059459_g63723_i0forward_frame_2 - 0.026 14.7 0.2 0.026 14.6 0.2 1.1 1 0 0 1 1 1 0 GAG-binding domain on surface antigen OB_NTP_bind PF07717.16 NODE_71662_length_220_cov_2.075676_g63721_i0reverse_frame_3 - 0.15 12.5 0.0 0.22 11.9 0.0 1.3 1 1 0 1 1 1 0 Oligonucleotide/oligosaccharide-binding (OB)-fold DUF5090 PF17009.5 NODE_71656_length_220_cov_2.113514_g63715_i0forward_frame_2 - 0.036 14.0 0.5 0.041 13.9 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Kdo PF06293.14 NODE_71655_length_220_cov_2.118919_g63714_i0reverse_frame_3 - 0.016 14.5 0.1 0.016 14.5 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF5520 PF17658.1 NODE_71655_length_220_cov_2.118919_g63714_i0reverse_frame_2 - 0.015 14.4 0.1 0.016 14.3 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5520) Pesticin PF16754.5 NODE_71650_length_220_cov_2.200000_g63709_i0reverse_frame_2 - 0.0086 16.0 0.3 0.0091 16.0 0.3 1.1 1 0 0 1 1 1 1 Bacterial toxin homologue of phage lysozyme, C-term gp45-slide_C PF09116.10 NODE_71650_length_220_cov_2.200000_g63709_i0reverse_frame_2 - 0.0088 16.1 0.3 0.011 15.7 0.3 1.1 1 0 0 1 1 1 1 gp45 sliding clamp, C terminal RTC4 PF14474.6 NODE_71642_length_220_cov_2.318919_g63701_i0reverse_frame_2 - 0.052 13.7 0.0 0.073 13.2 0.0 1.3 1 1 0 1 1 1 0 RTC4-like domain NADH_dehy_S2_C PF06444.11 NODE_71640_length_220_cov_2.329730_g63699_i0forward_frame_2 - 0.88 10.1 8.7 0.76 10.3 7.4 1.5 2 0 0 2 2 2 0 NADH dehydrogenase subunit 2 C-terminus Yeast_MT PF11403.8 NODE_71634_length_220_cov_2.432432_g63693_i0reverse_frame_2 - 0.13 12.8 0.4 0.13 12.8 0.4 2.3 2 0 0 2 2 2 0 Yeast metallothionein ELYS-bb PF16687.5 NODE_71633_length_220_cov_2.443243_g63692_i0forward_frame_3 - 0.0022 16.7 0.2 0.0024 16.6 0.2 1.0 1 0 0 1 1 1 1 beta-propeller of ELYS nucleoporin DUF4679 PF15728.5 NODE_71630_length_220_cov_2.454054_g63689_i0reverse_frame_3 - 0.067 12.2 0.1 0.069 12.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) MRP-S26 PF14943.6 NODE_71626_length_220_cov_2.545946_g63685_i0reverse_frame_3 - 6.4 6.6 21.5 7.4 6.4 21.5 1.1 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 Sec16 PF12932.7 NODE_71625_length_220_cov_2.567568_g63684_i0reverse_frame_3 - 0.11 13.1 0.1 0.12 13.0 0.1 1.1 1 0 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region NOD PF06816.13 NODE_71616_length_220_cov_2.794595_g63675_i0forward_frame_3 - 0.062 12.9 0.0 0.076 12.6 0.0 1.3 1 0 0 1 1 1 0 NOTCH protein ARF7EP_C PF14949.6 NODE_71615_length_220_cov_2.810811_g63674_i0reverse_frame_3 - 0.14 12.8 1.3 0.16 12.6 1.3 1.1 1 0 0 1 1 1 0 ARF7 effector protein C-terminus SspK PF08176.12 NODE_71615_length_220_cov_2.810811_g63674_i0forward_frame_3 - 0.012 15.9 0.0 0.017 15.4 0.0 1.3 1 0 0 1 1 1 0 Small acid-soluble spore protein K family DUF2589 PF11655.8 NODE_71614_length_220_cov_2.810811_g63673_i0forward_frame_2 - 0.024 15.0 0.0 0.028 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2589) RabGAP-TBC PF00566.18 NODE_71610_length_220_cov_2.983784_g63669_i0reverse_frame_3 - 1.3e-08 34.8 0.7 1.4e-08 34.7 0.7 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain TRAM1 PF08390.11 NODE_71610_length_220_cov_2.983784_g63669_i0reverse_frame_3 - 0.082 12.6 0.4 0.14 11.8 0.0 1.6 2 0 0 2 2 2 0 TRAM1-like protein GP120 PF00516.18 NODE_71608_length_220_cov_3.102703_g63667_i0reverse_frame_3 - 0.057 12.0 0.0 0.06 11.9 0.0 1.0 1 0 0 1 1 1 0 Envelope glycoprotein GP120 LRR_4 PF12799.7 NODE_71604_length_220_cov_3.502703_g63663_i0reverse_frame_2 - 0.053 14.0 0.3 0.069 13.6 0.3 1.2 1 0 0 1 1 1 0 Leucine Rich repeats (2 copies) DUF3810 PF12725.7 NODE_71603_length_220_cov_3.518919_g63662_i0reverse_frame_2 - 0.23 10.8 6.4 0.24 10.7 6.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF4389 PF14333.6 NODE_71603_length_220_cov_3.518919_g63662_i0reverse_frame_2 - 2 8.4 7.5 5.5 7.0 1.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) FKBP_N_2 PF18023.1 NODE_71603_length_220_cov_3.518919_g63662_i0forward_frame_2 - 0.0033 17.5 0.7 0.004 17.2 0.7 1.2 1 1 0 1 1 1 1 BDBT FKBP like N-terminal SMC_N PF02463.19 NODE_71603_length_220_cov_3.518919_g63662_i0forward_frame_2 - 0.0033 16.9 0.6 0.0039 16.7 0.6 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF1450 PF07293.11 NODE_71600_length_220_cov_3.751351_g63659_i0reverse_frame_2 - 0.13 12.1 0.1 0.18 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) NfI_DNAbd_pre-N PF10524.9 NODE_71600_length_220_cov_3.751351_g63659_i0forward_frame_3 - 0.11 12.4 0.5 0.25 11.3 0.6 1.6 1 1 1 2 2 2 0 Nuclear factor I protein pre-N-terminus PAP2 PF01569.21 NODE_71597_length_220_cov_4.054054_g63656_i0reverse_frame_3 - 0.033 14.0 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 PAP2 superfamily Pkinase_fungal PF17667.1 NODE_71592_length_220_cov_6.621622_g63651_i0forward_frame_3 - 0.00085 18.2 0.0 0.0009 18.1 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Pkinase PF00069.25 NODE_71592_length_220_cov_6.621622_g63651_i0forward_frame_3 - 0.004 16.6 0.0 0.0042 16.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain fn2 PF00040.19 NODE_71579_length_220_cov_21.794595_g63638_i0reverse_frame_2 - 0.038 14.3 0.0 0.052 13.8 0.0 1.4 1 1 0 1 1 1 0 Fibronectin type II domain Ribosomal_S8 PF00410.19 NODE_71579_length_220_cov_21.794595_g63638_i0forward_frame_2 - 0.073 13.0 0.4 0.23 11.4 0.4 1.8 1 1 0 1 1 1 0 Ribosomal protein S8 Shadoo PF14999.6 NODE_71578_length_220_cov_24.367568_g63637_i0forward_frame_3 - 1 9.5 12.6 1.3 9.1 12.6 1.3 1 0 0 1 1 1 0 Shadow of prion protein, neuroprotective Ac110_PIF PF07280.11 NODE_71577_length_220_cov_24.659459_g63636_i0reverse_frame_2 - 0.18 11.6 2.1 0.27 11.0 2.1 1.2 1 0 0 1 1 1 0 Per os infectivity factor AC110 FAM209 PF15206.6 NODE_71577_length_220_cov_24.659459_g63636_i0forward_frame_2 - 0.0073 16.1 0.6 0.0088 15.8 0.6 1.1 1 0 0 1 1 1 1 FAM209 family Gemini_AC4_5_2 PF08464.10 NODE_71574_length_220_cov_30.086486_g63633_i0reverse_frame_3 - 0.08 12.9 0.2 0.13 12.3 0.2 1.4 1 0 0 1 1 1 0 Geminivirus AC4/5 conserved region RSN1_7TM PF02714.15 NODE_71571_length_220_cov_35.545946_g63630_i0reverse_frame_2 - 0.045 13.0 3.7 0.05 12.9 3.7 1.1 1 0 0 1 1 1 0 Calcium-dependent channel, 7TM region, putative phosphate Msap1 PF17077.5 NODE_71570_length_220_cov_35.827027_g63629_i0forward_frame_3 - 0.071 12.3 0.1 0.075 12.2 0.1 1.0 1 0 0 1 1 1 0 Mitotic spindle associated protein SHE1 S-antigen PF05756.11 NODE_71567_length_220_cov_39.145946_g63626_i0reverse_frame_2 - 0.045 14.1 1.5 0.053 13.9 1.5 1.1 1 0 0 1 1 1 0 S-antigen protein Babuvirus_MP PF07234.11 NODE_71567_length_220_cov_39.145946_g63626_i0forward_frame_2 - 1.3 9.2 4.4 1.5 9.1 4.4 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein EFTUD2 PF16004.5 NODE_71566_length_220_cov_41.313514_g63625_i0reverse_frame_2 - 0.045 14.3 0.0 0.056 14.0 0.0 1.2 1 0 0 1 1 1 0 116 kDa U5 small nuclear ribonucleoprotein component N-terminus Bee_toxin PF17454.2 NODE_71565_length_220_cov_41.686486_g63624_i0forward_frame_3 - 0.05 13.6 4.9 0.057 13.5 4.3 1.5 1 1 0 1 1 1 0 Honey bee toxin PRANC PF09372.10 NODE_71565_length_220_cov_41.686486_g63624_i0forward_frame_2 - 0.023 15.0 2.3 0.039 14.3 2.3 1.5 1 1 0 1 1 1 0 PRANC domain Squash PF00299.18 NODE_71563_length_220_cov_42.464865_g63622_i0forward_frame_2 - 0.022 14.8 4.7 0.022 14.8 4.7 1.6 2 0 0 2 2 2 0 Squash family serine protease inhibitor Phospholamban PF04272.14 NODE_71561_length_220_cov_43.021622_g63620_i0forward_frame_2 - 0.017 14.6 1.4 0.028 13.9 1.4 1.3 1 0 0 1 1 1 0 Phospholamban VPS9 PF02204.18 NODE_71558_length_220_cov_45.616216_g63617_i0forward_frame_2 - 0.11 12.7 0.1 0.13 12.5 0.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain ART PF01129.18 NODE_71547_length_220_cov_56.972973_g63606_i0reverse_frame_3 - 0.062 12.6 0.0 0.07 12.4 0.0 1.0 1 0 0 1 1 1 0 NAD:arginine ADP-ribosyltransferase CSN7a_helixI PF18392.1 NODE_71542_length_220_cov_63.129730_g63601_i0reverse_frame_3 - 0.05 13.5 1.8 0.071 13.0 1.8 1.2 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain FBPase_3 PF01950.16 NODE_71541_length_220_cov_63.789189_g63600_i0reverse_frame_2 - 0.13 11.4 0.0 0.15 11.2 0.0 1.0 1 0 0 1 1 1 0 Fructose-1,6-bisphosphatase Agenet PF05641.12 NODE_71535_length_220_cov_68.048649_g63594_i0reverse_frame_2 - 1.9e-06 28.2 0.3 2.2e-06 28.0 0.3 1.1 1 0 0 1 1 1 1 Agenet domain Peptidase_C71 PF12386.8 NODE_71535_length_220_cov_68.048649_g63594_i0reverse_frame_2 - 0.0011 18.6 0.1 0.0012 18.5 0.1 1.2 1 0 0 1 1 1 1 Pseudomurein endo-isopeptidase Pei SAWADEE PF16719.5 NODE_71535_length_220_cov_68.048649_g63594_i0reverse_frame_2 - 0.0019 18.2 0.0 0.0021 18.1 0.0 1.1 1 0 0 1 1 1 1 SAWADEE domain Tudor-knot PF11717.8 NODE_71535_length_220_cov_68.048649_g63594_i0reverse_frame_2 - 0.065 13.1 0.1 0.096 12.6 0.1 1.3 1 0 0 1 1 1 0 RNA binding activity-knot of a chromodomain Cnn_1N PF07989.11 NODE_71533_length_220_cov_72.664865_g63592_i0reverse_frame_2 - 0.066 13.4 0.2 0.088 13.0 0.2 1.1 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF4637 PF15470.6 NODE_71533_length_220_cov_72.664865_g63592_i0forward_frame_2 - 0.074 12.8 0.5 0.088 12.5 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) IPTL-CTERM PF18203.1 NODE_71531_length_220_cov_74.708108_g63590_i0forward_frame_3 - 1.2 9.1 5.0 2.1 8.3 5.0 1.4 1 0 0 1 1 1 0 IPTL-CTERM motif DUF2415 PF10313.9 NODE_71530_length_220_cov_78.708108_g63589_i0forward_frame_2 - 0.17 11.8 0.2 0.26 11.3 0.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein domain (DUF2415) Bac_RepA_C PF18008.1 NODE_71527_length_220_cov_86.135135_g63586_i0reverse_frame_3 - 0.018 15.4 1.3 0.02 15.2 1.3 1.1 1 0 0 1 1 1 0 Replication initiator protein A C-terminal domain zf-WRNIP1_ubi PF18279.1 NODE_71525_length_220_cov_95.037838_g63584_i0forward_frame_2 - 1.7 9.5 5.2 76 4.3 5.2 2.5 1 1 0 1 1 1 0 Werner helicase-interacting protein 1 ubiquitin-binding domain HpaB_N PF11794.8 NODE_71523_length_220_cov_104.945946_g63582_i0reverse_frame_2 - 0.015 15.0 0.0 0.016 14.9 0.0 1.0 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal DUF2318 PF10080.9 NODE_71523_length_220_cov_104.945946_g63582_i0reverse_frame_2 - 0.072 13.2 0.2 0.09 12.9 0.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) FNIP_M PF14637.6 NODE_71520_length_220_cov_140.167568_g63579_i0forward_frame_3 - 0.077 13.0 0.1 0.085 12.9 0.1 1.0 1 0 0 1 1 1 0 Folliculin-interacting protein middle domain CAV_VP3 PF04771.12 NODE_71515_length_220_cov_227.567568_g63574_i0reverse_frame_3 - 0.075 13.2 0.0 0.08 13.1 0.0 1.1 1 0 0 1 1 1 0 Chicken anaemia virus VP-3 protein PDR_CDR PF06422.12 NODE_71515_length_220_cov_227.567568_g63574_i0forward_frame_2 - 0.18 11.7 0.9 0.22 11.4 0.9 1.1 1 0 0 1 1 1 0 CDR ABC transporter TMEM138 PF14935.6 NODE_71510_length_220_cov_782.021622_g63569_i0forward_frame_3 - 0.021 15.5 2.5 0.024 15.3 2.5 1.1 1 0 0 1 1 1 0 Transmembrane protein 138 NAD_binding_1 PF00175.21 NODE_71509_length_220_cov_2009.156757_g63568_i0forward_frame_2 - 0.00034 21.2 0.0 0.00034 21.2 0.0 1.2 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain RRN3 PF05327.11 NODE_71504_length_221_cov_0.854839_g63563_i0reverse_frame_2 - 0.22 10.0 0.4 0.23 10.0 0.4 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 zf-NADH-PPase PF09297.11 NODE_71502_length_221_cov_0.860215_g63561_i0forward_frame_3 - 0.15 11.7 2.1 2 8.1 0.2 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF2258 PF10015.9 NODE_71495_length_221_cov_0.962366_g63554_i0reverse_frame_3 - 0.0016 18.5 1.3 0.032 14.3 0.7 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2258) Mod_r PF07200.13 NODE_71495_length_221_cov_0.962366_g63554_i0reverse_frame_3 - 0.027 14.6 2.4 0.027 14.6 2.4 1.0 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein TraF_2 PF13729.6 NODE_71495_length_221_cov_0.962366_g63554_i0reverse_frame_3 - 0.094 12.1 1.5 0.11 11.9 1.5 1.1 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein ANAPC3 PF12895.7 NODE_71493_length_221_cov_0.978495_g63552_i0forward_frame_3 - 0.022 15.0 0.9 0.027 14.7 0.9 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 Cellulose_synt PF03552.14 NODE_71491_length_221_cov_1.026882_g63550_i0reverse_frame_3 - 3.5 6.0 9.0 3.9 5.8 9.0 1.0 1 0 0 1 1 1 0 Cellulose synthase DUF4481 PF14800.6 NODE_71491_length_221_cov_1.026882_g63550_i0reverse_frame_3 - 5.3 6.4 8.0 6.1 6.2 8.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) SUB1_ProdP9 PF18213.1 NODE_71491_length_221_cov_1.026882_g63550_i0forward_frame_2 - 0.043 13.7 0.1 0.053 13.4 0.1 1.1 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 AKAP7_NLS PF10469.9 NODE_71489_length_221_cov_1.064516_g63548_i0reverse_frame_2 - 0.0069 16.3 0.0 0.0075 16.2 0.0 1.0 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain 2_5_RNA_ligase2 PF13563.6 NODE_71489_length_221_cov_1.064516_g63548_i0reverse_frame_2 - 0.11 12.3 0.0 0.13 12.2 0.0 1.0 1 0 0 1 1 1 0 2'-5' RNA ligase superfamily SK_channel PF03530.14 NODE_71481_length_221_cov_1.080645_g63540_i0forward_frame_2 - 0.012 15.5 0.5 0.013 15.5 0.5 1.0 1 0 0 1 1 1 0 Calcium-activated SK potassium channel UTP15_C PF09384.10 NODE_71481_length_221_cov_1.080645_g63540_i0forward_frame_2 - 0.037 13.7 0.1 0.046 13.4 0.1 1.2 1 0 0 1 1 1 0 UTP15 C terminal Sec66 PF09802.9 NODE_71478_length_221_cov_1.172043_g63537_i0forward_frame_2 - 0.035 13.7 0.0 0.043 13.4 0.0 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit Sec66 TTL PF03133.15 NODE_71477_length_221_cov_1.177419_g63536_i0forward_frame_2 - 1.5e-26 93.3 0.1 1.5e-26 93.2 0.1 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Auxin_BP PF02041.16 NODE_71477_length_221_cov_1.177419_g63536_i0forward_frame_2 - 0.069 12.8 0.0 0.069 12.8 0.0 1.0 1 0 0 1 1 1 0 Auxin binding protein ATP-grasp_3 PF02655.14 NODE_71477_length_221_cov_1.177419_g63536_i0forward_frame_2 - 0.21 11.7 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 ATP-grasp domain DUF1213 PF06740.12 NODE_71466_length_221_cov_1.263441_g63525_i0reverse_frame_2 - 0.11 13.1 0.6 6.6 7.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1213) Cullin PF00888.22 NODE_71462_length_221_cov_1.279570_g63521_i0forward_frame_3 - 0.13 10.8 0.0 0.15 10.7 0.0 1.0 1 0 0 1 1 1 0 Cullin family Pox_A21 PF05323.12 NODE_71459_length_221_cov_1.284946_g63518_i0forward_frame_2 - 0.023 15.3 0.1 0.031 14.9 0.1 1.1 1 0 0 1 1 1 0 Poxvirus A21 Protein DAN PF03045.15 NODE_71458_length_221_cov_1.284946_g63517_i0forward_frame_2 - 0.01 15.9 0.4 0.014 15.4 0.4 1.2 1 0 0 1 1 1 0 DAN domain pRN1_helical PF13010.6 NODE_71457_length_221_cov_1.284946_g63516_i0forward_frame_2 - 0.12 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Primase helical domain Cyclin_C PF02984.19 NODE_71454_length_221_cov_1.290323_g63513_i0forward_frame_3 - 0.0021 18.1 0.0 0.0023 18.0 0.0 1.1 1 0 0 1 1 1 1 Cyclin, C-terminal domain IRK PF01007.20 NODE_71450_length_221_cov_1.290323_g63509_i0forward_frame_3 - 0.017 14.9 2.7 0.02 14.7 2.7 1.1 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain RANK_CRD_2 PF18278.1 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_3 - 0.002 18.2 0.1 0.0027 17.8 0.1 1.2 1 0 0 1 1 1 1 Receptor activator of the NF-KB cysteine-rich repeat domain 2 IRK PF01007.20 NODE_71440_length_221_cov_1.322581_g63499_i0forward_frame_2 - 0.082 12.7 1.2 0.097 12.5 1.2 1.1 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain Ribosomal_L12_N PF16320.5 NODE_71436_length_221_cov_1.327957_g63495_i0reverse_frame_3 - 0.0035 17.0 0.5 0.0046 16.6 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L7/L12 dimerisation domain CSN4_RPN5_eIF3a PF18420.1 NODE_71435_length_221_cov_1.338710_g63494_i0forward_frame_2 - 0.005 17.0 0.1 0.0067 16.6 0.1 1.3 1 0 0 1 1 1 1 CSN4/RPN5/eIF3a helix turn helix domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks334.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks334.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks334.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks334.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:09:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Phtf-FEM1B_bdg PF12129.8 NODE_71432_length_221_cov_1.360215_g63491_i0forward_frame_2 - 3.4 7.5 7.1 1.8 8.4 5.3 1.4 1 1 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor DUF3179 PF11376.8 NODE_71431_length_221_cov_1.370968_g63490_i0reverse_frame_3 - 0.05 13.0 0.1 0.053 12.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3179) ORC4_C PF14629.6 NODE_71431_length_221_cov_1.370968_g63490_i0reverse_frame_2 - 0.041 13.3 0.4 0.044 13.1 0.4 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus Transformer PF06495.11 NODE_71430_length_221_cov_1.387097_g63489_i0reverse_frame_2 - 0.55 10.3 10.1 0.66 10.1 10.1 1.0 1 0 0 1 1 1 0 Fruit fly transformer protein hEGF PF12661.7 NODE_71430_length_221_cov_1.387097_g63489_i0forward_frame_3 - 6 7.7 9.8 0.86 10.3 1.1 2.5 2 0 0 2 2 2 0 Human growth factor-like EGF HDOD PF08668.12 NODE_71423_length_221_cov_1.419355_g63482_i0forward_frame_3 - 0.087 12.3 0.0 0.087 12.3 0.0 1.1 1 0 0 1 1 1 0 HDOD domain T3SS_needle_E PF08988.10 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_2 - 3.2 8.0 6.8 4.5 7.5 6.8 1.2 1 0 0 1 1 1 0 Type III secretion system, cytoplasmic E component of needle DUF3464 PF11947.8 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_2 - 4.3 7.1 7.0 4.6 7.0 7.0 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 ACTL7A_N PF16840.5 NODE_71410_length_221_cov_1.516129_g63469_i0forward_frame_2 - 0.1 12.7 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Actin-like protein 7A N-terminus IBB PF01749.20 NODE_71401_length_221_cov_1.602151_g63460_i0reverse_frame_2 - 0.027 14.9 1.4 0.028 14.9 1.4 1.2 1 0 0 1 1 1 0 Importin beta binding domain HEV_ORF1 PF02444.16 NODE_71400_length_221_cov_1.602151_g63459_i0forward_frame_2 - 0.17 12.4 5.4 0.22 12.1 5.4 1.1 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) S1FA PF04689.13 NODE_71394_length_221_cov_1.677419_g63453_i0reverse_frame_2 - 0.0075 16.4 0.3 0.012 15.8 0.3 1.4 1 1 0 1 1 1 1 DNA binding protein S1FA Acetyltransf_1 PF00583.25 NODE_71393_length_221_cov_1.688172_g63452_i0forward_frame_2 - 0.1 12.8 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family DUF4684 PF15736.5 NODE_71388_length_221_cov_1.715054_g63447_i0reverse_frame_3 - 0.024 13.3 0.6 0.026 13.2 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4684) OAF PF14941.6 NODE_71384_length_221_cov_1.720430_g63443_i0reverse_frame_3 - 0.094 12.1 1.7 0.11 11.9 1.7 1.0 1 0 0 1 1 1 0 Transcriptional regulator, Out at first Lamprin PF06403.11 NODE_71381_length_221_cov_1.720430_g63440_i0forward_frame_2 - 0.028 14.4 2.8 0.03 14.3 2.8 1.2 1 0 0 1 1 1 0 Lamprin BAR_2 PF10455.9 NODE_71375_length_221_cov_1.790323_g63434_i0reverse_frame_3 - 0.055 12.6 0.0 0.055 12.6 0.0 1.1 1 0 0 1 1 1 0 Bin/amphiphysin/Rvs domain for vesicular trafficking Somatostatin PF03002.15 NODE_71369_length_221_cov_1.844086_g63428_i0reverse_frame_3 - 0.071 13.0 2.3 0.12 12.3 2.3 1.3 1 0 0 1 1 1 0 Somatostatin/Cortistatin family 7tm_1 PF00001.21 NODE_71369_length_221_cov_1.844086_g63428_i0reverse_frame_2 - 0.048 13.0 0.2 0.05 12.9 0.2 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) MORN PF02493.20 NODE_71367_length_221_cov_1.854839_g63426_i0reverse_frame_3 - 2.7e-06 27.0 2.7 0.012 15.5 0.2 3.3 3 1 0 3 3 3 2 MORN repeat Acyl_transf_3 PF01757.22 NODE_71363_length_221_cov_1.892473_g63422_i0reverse_frame_2 - 2.3e-06 26.9 9.8 2.4e-06 26.9 9.8 1.0 1 0 0 1 1 1 1 Acyltransferase family UPF0016 PF01169.19 NODE_71363_length_221_cov_1.892473_g63422_i0reverse_frame_2 - 0.04 14.2 2.9 3.5 8.0 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized protein family UPF0016 Med15_fungi PF05397.12 NODE_71359_length_221_cov_1.930108_g63418_i0forward_frame_2 - 0.023 15.0 0.2 0.024 14.9 0.2 1.0 1 0 0 1 1 1 0 Mediator complex subunit 15 Crp PF00325.20 NODE_71353_length_221_cov_2.026882_g63412_i0reverse_frame_2 - 0.029 14.0 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family TPR_2 PF07719.17 NODE_71353_length_221_cov_2.026882_g63412_i0forward_frame_3 - 0.0079 16.2 0.0 0.013 15.5 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TMEM210 PF15195.6 NODE_71352_length_221_cov_2.059140_g63411_i0reverse_frame_3 - 0.091 13.2 0.9 0.12 12.8 0.9 1.1 1 0 0 1 1 1 0 TMEM210 family zf-C2H2_6 PF13912.6 NODE_71352_length_221_cov_2.059140_g63411_i0reverse_frame_2 - 0.13 12.3 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger CI-B14_5a PF07347.12 NODE_71351_length_221_cov_2.096774_g63410_i0forward_frame_2 - 0.018 14.9 0.1 0.021 14.7 0.1 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) zf-RING-like PF08746.11 NODE_71350_length_221_cov_2.107527_g63409_i0forward_frame_3 - 0.035 14.4 0.8 0.055 13.8 0.8 1.4 1 0 0 1 1 1 0 RING-like domain Cys_box PF17869.1 NODE_71347_length_221_cov_2.123656_g63406_i0reverse_frame_2 - 0.056 13.6 0.2 0.065 13.4 0.2 1.1 1 0 0 1 1 1 0 Anosmin cysteine rich domain LrgA PF03788.14 NODE_71345_length_221_cov_2.139785_g63404_i0forward_frame_3 - 1.1e-13 50.9 3.4 1.6e-13 50.4 3.4 1.2 1 0 0 1 1 1 1 LrgA family Glycoprotein_G PF00802.19 NODE_71345_length_221_cov_2.139785_g63404_i0forward_frame_3 - 0.061 12.7 1.1 0.068 12.5 1.1 1.0 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Herpes_UL37_2 PF07413.11 NODE_71345_length_221_cov_2.139785_g63404_i0forward_frame_3 - 0.11 11.7 1.2 0.13 11.5 1.2 1.0 1 0 0 1 1 1 0 Betaherpesvirus immediate-early glycoprotein UL37 TGBp3 PF02495.17 NODE_71345_length_221_cov_2.139785_g63404_i0forward_frame_3 - 1.1 9.0 5.6 5.8 6.7 5.6 2.0 1 1 0 1 1 1 0 Triple gene block 3 Pro_sub2 PF18513.1 NODE_71342_length_221_cov_2.145161_g63401_i0reverse_frame_2 - 0.19 11.9 1.4 0.27 11.4 1.4 1.2 1 0 0 1 1 1 0 Prodomain subtilisin 2 DUF3139 PF11337.8 NODE_71335_length_221_cov_2.231183_g63394_i0forward_frame_2 - 0.095 13.4 0.4 0.11 13.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) Monooxygenase_B PF04744.12 NODE_71333_length_221_cov_2.268817_g63392_i0forward_frame_3 - 0.15 10.9 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Monooxygenase subunit B protein Nudix_N PF12535.8 NODE_71330_length_221_cov_2.327957_g63389_i0reverse_frame_2 - 0.029 14.0 0.5 0.041 13.5 0.5 1.2 1 0 0 1 1 1 0 Hydrolase of X-linked nucleoside diphosphate N terminal CSS-motif PF12792.7 NODE_71327_length_221_cov_2.360215_g63386_i0reverse_frame_3 - 9.2e-05 22.0 0.2 0.0001 21.9 0.2 1.1 1 0 0 1 1 1 1 CSS motif domain associated with EAL P22_AR_C PF10548.9 NODE_71327_length_221_cov_2.360215_g63386_i0forward_frame_2 - 0.074 13.2 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 P22AR C-terminal domain ArgoN PF16486.5 NODE_71320_length_221_cov_2.451613_g63379_i0reverse_frame_2 - 0.03 14.9 0.0 0.035 14.7 0.0 1.1 1 0 0 1 1 1 0 N-terminal domain of argonaute GST_N PF02798.20 NODE_71319_length_221_cov_2.451613_g63378_i0reverse_frame_2 - 0.00011 22.5 0.0 0.00013 22.3 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Pkinase PF00069.25 NODE_71318_length_221_cov_2.456989_g63377_i0forward_frame_3 - 2.6e-14 53.2 0.0 2.8e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_71318_length_221_cov_2.456989_g63377_i0forward_frame_3 - 0.0047 16.3 0.0 0.0048 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4478 PF14793.6 NODE_71315_length_221_cov_2.510753_g63374_i0reverse_frame_2 - 0.11 12.4 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases 3HCDH_N PF02737.18 NODE_71314_length_221_cov_2.532258_g63373_i0forward_frame_2 - 0.12 12.2 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ycf4 PF02392.16 NODE_71314_length_221_cov_2.532258_g63373_i0forward_frame_2 - 0.13 11.8 1.2 0.14 11.7 1.2 1.0 1 0 0 1 1 1 0 Ycf4 Glycos_transf_2 PF00535.26 NODE_71312_length_221_cov_2.661290_g63371_i0forward_frame_2 - 0.007 16.2 0.3 0.017 15.0 0.1 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 2 DegT_DnrJ_EryC1 PF01041.17 NODE_71312_length_221_cov_2.661290_g63371_i0forward_frame_2 - 0.023 14.0 0.0 0.03 13.6 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family OPA3 PF07047.12 NODE_71310_length_221_cov_2.725806_g63369_i0forward_frame_2 - 0.083 12.7 0.0 0.092 12.5 0.0 1.0 1 0 0 1 1 1 0 Optic atrophy 3 protein (OPA3) G-7-MTase PF12803.7 NODE_71309_length_221_cov_2.806452_g63368_i0reverse_frame_3 - 0.12 11.5 0.5 0.15 11.2 0.5 1.1 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) Cas6b_C PF17262.2 NODE_71309_length_221_cov_2.806452_g63368_i0forward_frame_3 - 0.044 13.9 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 Cas6b C-terminal domain CTD_bind PF04818.13 NODE_71302_length_221_cov_3.091398_g63361_i0reverse_frame_3 - 0.072 13.9 1.7 0.11 13.4 0.4 1.8 2 0 0 2 2 2 0 RNA polymerase II-binding domain. VIT1 PF01988.19 NODE_71302_length_221_cov_3.091398_g63361_i0reverse_frame_3 - 0.41 10.5 0.8 0.4 10.5 0.8 1.0 1 0 0 1 1 1 0 VIT family TauE PF01925.19 NODE_71296_length_221_cov_3.387097_g63355_i0reverse_frame_2 - 0.0074 15.9 0.0 0.0077 15.9 0.0 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE RE_NgoPII PF09521.10 NODE_71296_length_221_cov_3.387097_g63355_i0forward_frame_3 - 0.065 12.4 0.0 0.068 12.3 0.0 1.1 1 0 0 1 1 1 0 NgoPII restriction endonuclease PH_3 PF14593.6 NODE_71296_length_221_cov_3.387097_g63355_i0forward_frame_3 - 0.11 12.6 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 PH domain DUF5136 PF17199.4 NODE_71293_length_221_cov_3.865591_g63352_i0forward_frame_2 - 5.5 6.8 9.1 9 6.1 3.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF5136) Cys_rich_KTR PF14205.6 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_3 - 0.016 15.0 0.4 0.029 14.2 0.4 1.5 1 1 0 1 1 1 0 Cysteine-rich KTR Pro_sub2 PF18513.1 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_2 - 0.0082 16.3 0.2 0.0094 16.1 0.2 1.2 1 0 0 1 1 1 1 Prodomain subtilisin 2 YvbH_ext PF11724.8 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_2 - 0.013 15.8 0.2 0.02 15.2 0.2 1.4 1 1 0 1 1 1 0 YvbH-like oligomerisation region Dynactin_p22 PF07426.11 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_2 - 0.047 13.5 0.5 0.055 13.3 0.5 1.1 1 0 0 1 1 1 0 Dynactin subunit p22 Goodbye PF17109.5 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_2 - 0.065 13.7 0.1 0.069 13.6 0.1 1.1 1 0 0 1 1 1 0 fungal STAND N-terminal Goodbye domain ATP-synt_8 PF00895.20 NODE_71292_length_221_cov_4.247312_g63351_i0forward_frame_3 - 0.18 12.3 1.5 0.26 11.8 1.5 1.2 1 0 0 1 1 1 0 ATP synthase protein 8 ILVD_EDD PF00920.21 NODE_71287_length_221_cov_4.795699_g63346_i0reverse_frame_2 - 5.4e-25 88.0 0.0 5.4e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 Dehydratase family DUF1854 PF08909.11 NODE_71283_length_221_cov_12.752688_g63342_i0forward_frame_3 - 0.14 12.0 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1854) SCAI PF12070.8 NODE_71281_length_221_cov_14.623656_g63340_i0forward_frame_2 - 0.022 13.7 1.9 0.023 13.6 1.9 1.0 1 0 0 1 1 1 0 Protein SCAI ID PF18543.1 NODE_71278_length_221_cov_20.392473_g63337_i0reverse_frame_3 - 0.068 13.2 3.3 4.7 7.3 0.1 2.2 1 1 1 2 2 2 0 Intracellular delivery domain DUF454 PF04304.13 NODE_71276_length_221_cov_25.575269_g63335_i0reverse_frame_3 - 0.097 12.7 3.0 0.17 11.9 1.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF454) DUF3446 PF11928.8 NODE_71273_length_221_cov_30.564516_g63332_i0reverse_frame_3 - 0.047 14.0 0.0 0.054 13.8 0.0 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain LEAP-2 PF07359.11 NODE_71271_length_221_cov_31.634409_g63330_i0reverse_frame_3 - 1.6 8.6 3.8 0.99 9.3 0.7 1.9 1 1 1 2 2 2 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Tox-REase-2 PF15646.6 NODE_71270_length_221_cov_31.790323_g63329_i0reverse_frame_2 - 0.036 14.2 0.1 0.041 14.0 0.1 1.0 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 Chromadorea_ALT PF05535.12 NODE_71267_length_221_cov_33.032258_g63326_i0forward_frame_3 - 0.023 14.9 0.9 0.025 14.8 0.9 1.1 1 0 0 1 1 1 0 Chromadorea ALT protein HemY_N PF07219.13 NODE_71265_length_221_cov_35.000000_g63324_i0reverse_frame_2 - 0.08 13.1 0.0 0.091 13.0 0.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus SPT16 PF08644.11 NODE_71264_length_221_cov_36.456989_g63323_i0reverse_frame_2 - 0.0023 18.1 5.7 0.0025 18.0 5.7 1.1 1 0 0 1 1 1 1 FACT complex subunit (SPT16/CDC68) LysR_substrate PF03466.20 NODE_71264_length_221_cov_36.456989_g63323_i0forward_frame_3 - 0.15 11.4 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 LysR substrate binding domain DCX PF03607.17 NODE_71261_length_221_cov_38.354839_g63320_i0reverse_frame_2 - 0.044 13.9 0.1 0.061 13.4 0.1 1.2 1 0 0 1 1 1 0 Doublecortin Alpha-amylase PF00128.24 NODE_71260_length_221_cov_41.107527_g63319_i0forward_frame_3 - 5.7e-06 26.1 0.0 5.8e-06 26.1 0.0 1.0 1 0 0 1 1 1 1 Alpha amylase, catalytic domain HXXEE PF13787.6 NODE_71257_length_221_cov_42.446237_g63316_i0reverse_frame_2 - 0.36 11.6 5.2 0.6 10.9 5.2 1.5 1 1 0 1 1 1 0 Protein of unknown function with HXXEE motif CRA PF06589.11 NODE_71257_length_221_cov_42.446237_g63316_i0forward_frame_2 - 0.097 12.8 7.2 0.099 12.8 7.2 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) DSPc PF00782.20 NODE_71250_length_221_cov_49.403226_g63309_i0forward_frame_2 - 0.01 15.6 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain HPP PF04982.13 NODE_71243_length_221_cov_55.537634_g63302_i0reverse_frame_3 - 0.054 13.7 0.2 0.057 13.6 0.2 1.1 1 0 0 1 1 1 0 HPP family C_tripleX PF02363.19 NODE_71243_length_221_cov_55.537634_g63302_i0reverse_frame_2 - 1.3 9.5 5.2 8 7.0 0.3 2.2 2 0 0 2 2 2 0 Cysteine rich repeat CxC6 PF18721.1 NODE_71243_length_221_cov_55.537634_g63302_i0forward_frame_2 - 0.082 13.2 0.1 0.095 13.0 0.1 1.2 1 0 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases Headcase PF16002.5 NODE_71242_length_221_cov_56.005376_g63301_i0reverse_frame_3 - 0.0046 16.4 0.0 0.0056 16.2 0.0 1.1 1 0 0 1 1 1 1 Headcase protein DUF4718 PF15842.5 NODE_71242_length_221_cov_56.005376_g63301_i0reverse_frame_2 - 0.046 13.5 0.3 0.05 13.4 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) DUF1279 PF06916.13 NODE_71241_length_221_cov_57.693548_g63300_i0reverse_frame_2 - 0.017 15.7 0.1 0.019 15.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1279) Flu_B_NS1 PF02942.14 NODE_71238_length_221_cov_58.731183_g63297_i0reverse_frame_2 - 0.028 13.5 0.4 0.031 13.3 0.4 1.0 1 0 0 1 1 1 0 Influenza B non-structural protein (NS1) MHC_I_C PF06623.11 NODE_71237_length_221_cov_59.252688_g63296_i0reverse_frame_3 - 0.052 13.5 0.8 0.079 12.9 0.8 1.3 1 0 0 1 1 1 0 MHC_I C-terminus DUF1168 PF06658.12 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 0.16 11.7 16.0 0.2 11.5 16.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) DUF4718 PF15842.5 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 0.19 11.5 4.6 0.2 11.4 4.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) PHC2_SAM_assoc PF16616.5 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 0.2 12.5 11.8 0.22 12.4 11.8 1.1 1 0 0 1 1 1 0 Unstructured region on Polyhomeotic-like protein 1 and 2 DUF755 PF05501.11 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 0.3 11.3 16.1 0.39 11.0 16.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) CMS1 PF14617.6 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 1.5 8.1 9.3 1.6 8.0 9.3 1.2 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit Peptidase_S49_N PF08496.10 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 2.5 8.1 10.3 2.9 7.9 10.3 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal NARP1 PF12569.8 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 5.9 5.7 13.8 6.5 5.5 13.8 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Rrn6 PF10214.9 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 8.2 4.8 11.4 9 4.6 11.4 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor zf-RING_4 PF14570.6 NODE_71235_length_221_cov_63.139785_g63294_i0forward_frame_3 - 0.34 10.7 3.9 0.5 10.2 3.9 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain PriA_CRR PF18319.1 NODE_71235_length_221_cov_63.139785_g63294_i0forward_frame_3 - 0.7 9.9 5.4 0.8 9.8 0.7 2.4 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain Trypan_PARP PF05887.11 NODE_71234_length_221_cov_64.182796_g63293_i0forward_frame_3 - 0.098 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF2652 PF10851.8 NODE_71228_length_221_cov_76.618280_g63287_i0reverse_frame_3 - 0.0002 21.5 0.5 0.00023 21.3 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2652) FLILHELTA PF10306.9 NODE_71226_length_221_cov_77.569892_g63285_i0forward_frame_3 - 0.0047 17.3 0.0 0.0058 17.0 0.0 1.2 1 0 0 1 1 1 1 Hypothetical protein FLILHELTA LYRIC PF15686.5 NODE_71222_length_221_cov_88.150538_g63281_i0reverse_frame_2 - 0.21 11.1 4.5 0.25 10.9 4.5 1.0 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family Kinocilin PF15033.6 NODE_71220_length_221_cov_122.075269_g63279_i0reverse_frame_2 - 0.082 12.6 0.0 0.091 12.4 0.0 1.1 1 0 0 1 1 1 0 Kinocilin protein DNA_ligase_IV PF11411.8 NODE_71218_length_221_cov_122.500000_g63277_i0reverse_frame_2 - 0.055 13.6 0.7 0.1 12.8 0.7 1.4 1 0 0 1 1 1 0 DNA ligase IV Peptidase_M6 PF05547.11 NODE_71218_length_221_cov_122.500000_g63277_i0reverse_frame_2 - 0.57 8.4 5.0 0.64 8.3 5.0 1.0 1 0 0 1 1 1 0 Immune inhibitor A peptidase M6 Presenilin PF01080.17 NODE_71218_length_221_cov_122.500000_g63277_i0forward_frame_2 - 1.5 7.5 9.3 1.6 7.4 9.3 1.0 1 0 0 1 1 1 0 Presenilin Vpu PF00558.19 NODE_71218_length_221_cov_122.500000_g63277_i0forward_frame_2 - 7 6.5 9.4 9.5 6.1 9.4 1.3 1 0 0 1 1 1 0 Vpu protein Herpes_LAMP2 PF06126.11 NODE_71213_length_221_cov_173.827957_g63272_i0reverse_frame_3 - 0.013 14.2 0.6 0.014 14.1 0.6 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 Phage_CRI PF05144.14 NODE_71213_length_221_cov_173.827957_g63272_i0reverse_frame_3 - 0.053 12.8 1.1 0.056 12.8 1.1 1.1 1 0 0 1 1 1 0 Phage replication protein CRI UPF0004 PF00919.20 NODE_71211_length_221_cov_246.881720_g63270_i0reverse_frame_2 - 0.02 14.9 0.2 0.022 14.8 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein family UPF0004 p31comet PF06581.12 NODE_71211_length_221_cov_246.881720_g63270_i0reverse_frame_2 - 0.095 11.8 1.3 0.1 11.8 1.3 1.0 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding TMEM71 PF15121.6 NODE_71204_length_221_cov_1864.236559_g63263_i0forward_frame_3 - 0.086 12.5 1.8 0.091 12.4 1.8 1.1 1 0 0 1 1 1 0 TMEM71 protein family DDE_3 PF13358.6 NODE_71203_length_222_cov_0.818182_g63262_i0forward_frame_2 - 3.6e-05 23.6 0.1 5.3e-05 23.0 0.1 1.3 1 1 0 1 1 1 1 DDE superfamily endonuclease hNIFK_binding PF12196.8 NODE_71197_length_222_cov_0.855615_g63256_i0reverse_frame_3 - 2.3 7.7 4.9 0.38 10.3 1.2 1.7 2 0 0 2 2 2 0 FHA Ki67 binding domain of hNIFK CATSPERG PF15064.6 NODE_71197_length_222_cov_0.855615_g63256_i0reverse_frame_2 - 0.12 10.2 0.2 0.12 10.1 0.2 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit gamma Gp45_2 PF17470.2 NODE_71196_length_222_cov_0.855615_g63255_i0reverse_frame_2 - 0.0078 16.2 0.2 0.012 15.6 0.2 1.3 1 0 0 1 1 1 1 Phage gene product 45.2 GAT PF03127.14 NODE_71196_length_222_cov_0.855615_g63255_i0reverse_frame_2 - 0.062 13.6 0.4 0.086 13.2 0.4 1.4 1 1 0 1 1 1 0 GAT domain DUF4342 PF14242.6 NODE_71196_length_222_cov_0.855615_g63255_i0reverse_frame_2 - 0.13 12.3 0.4 0.17 11.9 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) CENP-I PF07778.11 NODE_71196_length_222_cov_0.855615_g63255_i0forward_frame_3 - 0.02 13.7 0.3 0.022 13.5 0.3 1.0 1 0 0 1 1 1 0 Mis6 R3H PF01424.22 NODE_71193_length_222_cov_0.855615_g63252_i0reverse_frame_2 - 0.0044 17.0 0.0 0.0054 16.7 0.0 1.2 1 0 0 1 1 1 1 R3H domain Mak16 PF04874.14 NODE_71188_length_222_cov_0.941176_g63247_i0reverse_frame_2 - 0.021 15.4 5.7 0.025 15.2 5.7 1.0 1 0 0 1 1 1 0 Mak16 protein C-terminal region LRR19-TM PF15176.6 NODE_71188_length_222_cov_0.941176_g63247_i0reverse_frame_2 - 5.5 7.0 9.0 48 4.0 9.0 1.9 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain TP1 PF02079.16 NODE_71185_length_222_cov_1.037433_g63244_i0reverse_frame_2 - 0.025 14.5 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 Nuclear transition protein 1 TPR_7 PF13176.6 NODE_71178_length_222_cov_1.069519_g63237_i0forward_frame_2 - 0.086 12.9 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_71178_length_222_cov_1.069519_g63237_i0forward_frame_2 - 0.097 12.8 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat LRR_3 PF07725.12 NODE_71177_length_222_cov_1.117647_g63236_i0reverse_frame_2 - 0.099 12.5 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 Leucine Rich Repeat Herpes_BBRF1 PF04793.12 NODE_71176_length_222_cov_1.144385_g63235_i0reverse_frame_3 - 0.092 11.8 1.7 0.099 11.7 1.7 1.0 1 0 0 1 1 1 0 BRRF1-like protein Rpp20 PF12328.8 NODE_71176_length_222_cov_1.144385_g63235_i0forward_frame_2 - 0.035 14.1 0.5 0.04 13.9 0.5 1.1 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P DUF3902 PF13042.6 NODE_71170_length_222_cov_1.176471_g63229_i0forward_frame_2 - 0.083 12.5 0.2 0.087 12.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3902) CAT PF00302.18 NODE_71169_length_222_cov_1.187166_g63228_i0forward_frame_2 - 0.023 14.7 0.1 0.028 14.3 0.1 1.1 1 0 0 1 1 1 0 Chloramphenicol acetyltransferase Corona_M PF01635.18 NODE_71168_length_222_cov_1.192513_g63227_i0forward_frame_3 - 0.049 12.9 2.8 0.057 12.7 2.8 1.0 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein PCYCGC PF13798.6 NODE_71168_length_222_cov_1.192513_g63227_i0forward_frame_2 - 0.096 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function with PCYCGC motif Aquarius_N PF16399.5 NODE_71165_length_222_cov_1.192513_g63224_i0reverse_frame_3 - 0.049 11.7 0.3 0.053 11.6 0.3 1.0 1 0 0 1 1 1 0 Intron-binding protein aquarius N-terminus Baculo_8kDa PF06096.11 NODE_71162_length_222_cov_1.235294_g63221_i0forward_frame_3 - 0.066 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Baculoviridae 8.2 KDa protein LysE PF01810.18 NODE_71161_length_222_cov_1.240642_g63220_i0reverse_frame_3 - 0.056 12.9 0.1 0.058 12.9 0.1 1.1 1 0 0 1 1 1 0 LysE type translocator SCP-1 PF05483.12 NODE_71158_length_222_cov_1.262032_g63217_i0reverse_frame_2 - 0.0059 14.7 0.6 0.0068 14.5 0.6 1.0 1 0 0 1 1 1 1 Synaptonemal complex protein 1 (SCP-1) MerE PF05052.12 NODE_71150_length_222_cov_1.278075_g63209_i0forward_frame_3 - 0.067 13.1 1.2 0.09 12.7 1.2 1.2 1 0 0 1 1 1 0 MerE protein DUF2256 PF10013.9 NODE_71145_length_222_cov_1.283422_g63204_i0reverse_frame_3 - 0.098 12.8 1.1 0.098 12.8 1.1 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) TGS PF02824.21 NODE_71145_length_222_cov_1.283422_g63204_i0reverse_frame_3 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 TGS domain DUF5093 PF17011.5 NODE_71141_length_222_cov_1.283422_g63200_i0forward_frame_3 - 0.0028 17.9 0.2 0.0034 17.7 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5093) ALMT PF11744.8 NODE_71137_length_222_cov_1.331551_g63196_i0reverse_frame_3 - 0.23 10.3 0.0 0.27 10.0 0.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter RELT PF12606.8 NODE_71135_length_222_cov_1.342246_g63194_i0reverse_frame_2 - 0.055 12.5 0.0 0.091 11.8 0.0 1.3 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Hex_IIIa PF02455.16 NODE_71134_length_222_cov_1.347594_g63193_i0forward_frame_3 - 0.043 12.6 0.0 0.046 12.5 0.0 1.0 1 0 0 1 1 1 0 Hexon-associated protein (IIIa) Nif11 PF07862.11 NODE_71134_length_222_cov_1.347594_g63193_i0forward_frame_2 - 0.0055 17.0 0.2 0.014 15.7 0.1 1.6 2 0 0 2 2 2 1 Nif11 domain Chlam_PMP PF02415.17 NODE_71131_length_222_cov_1.363636_g63190_i0reverse_frame_3 - 7.7e-05 22.9 9.3 0.0058 17.0 4.0 2.4 2 0 0 2 2 2 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat DUF5546 PF17700.1 NODE_71128_length_222_cov_1.401070_g63187_i0reverse_frame_3 - 0.036 14.4 0.0 0.044 14.1 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5546) AvrLm4-7 PF18661.1 NODE_71128_length_222_cov_1.401070_g63187_i0forward_frame_3 - 0.059 14.4 0.0 0.069 14.2 0.0 1.1 1 0 0 1 1 1 0 Avirulence Effector AvrLm4-7 Sod_Fe_C PF02777.18 NODE_71124_length_222_cov_1.411765_g63183_i0forward_frame_2 - 9.3e-05 22.5 0.3 0.00013 22.1 0.3 1.2 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain BK_channel_a PF03493.18 NODE_71120_length_222_cov_1.465241_g63179_i0reverse_frame_2 - 0.074 13.2 0.8 0.08 13.1 0.8 1.1 1 0 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit zf-LSD1 PF06943.12 NODE_71109_length_222_cov_1.502674_g63168_i0reverse_frame_3 - 0.039 13.8 0.5 0.097 12.5 0.3 1.8 2 0 0 2 2 2 0 LSD1 zinc finger PGAP1 PF07819.13 NODE_71109_length_222_cov_1.502674_g63168_i0reverse_frame_3 - 0.047 13.4 0.0 0.048 13.4 0.0 1.0 1 0 0 1 1 1 0 PGAP1-like protein EBV-NA3 PF05009.12 NODE_71107_length_222_cov_1.534759_g63166_i0reverse_frame_3 - 0.062 12.8 0.1 0.062 12.8 0.1 1.0 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) DUF4452 PF14618.6 NODE_71107_length_222_cov_1.534759_g63166_i0forward_frame_2 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4452) DUF1410 PF07198.11 NODE_71103_length_222_cov_1.577540_g63162_i0forward_frame_2 - 0.01 16.3 1.5 0.065 13.7 1.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1410) Hexokinase_2 PF03727.16 NODE_71098_length_222_cov_1.598930_g63157_i0forward_frame_3 - 0.21 11.0 0.0 0.25 10.7 0.0 1.0 1 0 0 1 1 1 0 Hexokinase BsuPI PF12690.7 NODE_71095_length_222_cov_1.631016_g63154_i0forward_frame_3 - 0.0059 16.6 0.3 0.0068 16.4 0.3 1.1 1 0 0 1 1 1 1 Intracellular proteinase inhibitor UreE_N PF02814.15 NODE_71094_length_222_cov_1.647059_g63153_i0forward_frame_3 - 0.18 11.4 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain Bmt2 PF11968.8 NODE_71094_length_222_cov_1.647059_g63153_i0forward_frame_2 - 0.031 14.1 0.1 0.038 13.8 0.1 1.3 1 1 0 1 1 1 0 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 Maelstrom PF13017.6 NODE_71091_length_222_cov_1.663102_g63150_i0forward_frame_3 - 0.036 13.7 0.1 0.036 13.7 0.1 1.1 1 0 0 1 1 1 0 piRNA pathway germ-plasm component # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks335.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks335.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks335.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks335.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:21:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TatD_DNase PF01026.21 NODE_71086_length_222_cov_1.700535_g63145_i0forward_frame_3 - 0.067 12.6 0.0 0.54 9.6 0.0 1.9 1 1 0 1 1 1 0 TatD related DNase Mucin PF01456.17 NODE_71085_length_222_cov_1.705882_g63144_i0reverse_frame_2 - 3.3 7.7 21.6 3.5 7.6 21.6 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein MAGE_N PF12440.8 NODE_71085_length_222_cov_1.705882_g63144_i0reverse_frame_2 - 8.4 7.2 12.0 10 6.8 12.0 1.3 1 0 0 1 1 1 0 Melanoma associated antigen family N terminal DUF5004 PF16395.5 NODE_71084_length_222_cov_1.705882_g63143_i0forward_frame_2 - 0.11 12.5 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5004) MUG113 PF13455.6 NODE_71083_length_222_cov_1.705882_g63142_i0reverse_frame_2 - 0.13 12.9 0.0 0.15 12.7 0.0 1.2 1 0 0 1 1 1 0 Meiotically up-regulated gene 113 Ald_deCOase PF11266.8 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_2 - 0.051 13.3 0.9 0.052 13.2 0.9 1.1 1 0 0 1 1 1 0 Long-chain fatty aldehyde decarbonylase Seryl_tRNA_N PF02403.22 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_2 - 0.2 11.9 11.9 0.61 10.4 11.9 1.7 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF641 PF04859.12 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_2 - 0.22 11.8 7.2 0.25 11.7 7.2 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF4927 PF16279.5 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_2 - 0.42 11.7 7.9 0.5 11.4 7.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4927) Prefoldin_2 PF01920.20 NODE_71078_length_222_cov_1.732620_g63137_i0reverse_frame_3 - 0.016 15.2 1.4 0.021 14.8 1.4 1.3 1 0 0 1 1 1 0 Prefoldin subunit Pkinase PF00069.25 NODE_71074_length_222_cov_1.780749_g63133_i0forward_frame_2 - 8.7e-05 22.0 0.0 0.0001 21.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Ac110_PIF PF07280.11 NODE_71071_length_222_cov_1.802139_g63130_i0reverse_frame_3 - 0.09 12.6 2.5 0.095 12.5 1.3 1.7 2 1 0 2 2 2 0 Per os infectivity factor AC110 DUF356 PF04009.12 NODE_71071_length_222_cov_1.802139_g63130_i0forward_frame_2 - 0.022 15.0 0.1 0.027 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF356) Saf_2TM PF18303.1 NODE_71058_length_222_cov_1.983957_g63117_i0reverse_frame_2 - 0.0052 16.4 0.1 0.0055 16.3 0.1 1.1 1 0 0 1 1 1 1 SAVED-fused 2TM effector domain Chlam_PMP PF02415.17 NODE_71056_length_222_cov_1.989305_g63115_i0forward_frame_3 - 3.9e-05 23.9 12.9 0.0058 17.0 4.0 2.4 2 0 0 2 2 2 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ribosomal_60s PF00428.19 NODE_71048_length_222_cov_2.053476_g63107_i0reverse_frame_2 - 0.022 15.3 0.5 0.028 15.0 0.5 1.1 1 0 0 1 1 1 0 60s Acidic ribosomal protein PCSK9_C1 PF18459.1 NODE_71048_length_222_cov_2.053476_g63107_i0reverse_frame_2 - 0.07 13.3 1.1 0.16 12.2 1.1 1.6 1 1 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain DUF3824 PF12868.7 NODE_71048_length_222_cov_2.053476_g63107_i0reverse_frame_2 - 0.83 10.3 5.6 1 10.0 5.6 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) DUF5475 PF17569.2 NODE_71046_length_222_cov_2.090909_g63105_i0forward_frame_3 - 0.076 13.3 0.1 0.086 13.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5475) Arm-DNA-bind_5 PF17293.2 NODE_71046_length_222_cov_2.090909_g63105_i0forward_frame_2 - 0.08 13.4 0.0 0.1 13.1 0.0 1.3 1 1 0 1 1 1 0 Arm DNA-binding domain DUF4350 PF14258.6 NODE_71046_length_222_cov_2.090909_g63105_i0forward_frame_2 - 0.18 12.3 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) PGK PF00162.19 NODE_71044_length_222_cov_2.122995_g63103_i0reverse_frame_2 - 1.9e-13 50.1 0.0 2.2e-13 49.9 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase BLOC1_2 PF10046.9 NODE_71044_length_222_cov_2.122995_g63103_i0reverse_frame_2 - 0.099 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 EKLF_TAD1 PF16832.5 NODE_71043_length_222_cov_2.133690_g63102_i0forward_frame_3 - 1.4 8.8 6.2 2.2 8.2 0.0 2.3 2 0 0 2 2 2 0 Erythroid krueppel-like transcription factor, transactivation 1 BPD_transp_1 PF00528.22 NODE_71041_length_222_cov_2.139037_g63100_i0forward_frame_2 - 7e-13 48.7 0.1 7.6e-13 48.6 0.1 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component LELP1 PF15042.6 NODE_71039_length_222_cov_2.149733_g63098_i0reverse_frame_3 - 0.16 12.3 6.2 0.19 12.1 6.2 1.0 1 0 0 1 1 1 0 Late cornified envelope-like proline-rich protein 1 RPA_interact_N PF14766.6 NODE_71029_length_222_cov_2.283422_g63088_i0forward_frame_3 - 0.09 12.4 1.5 0.15 11.7 1.5 1.3 1 0 0 1 1 1 0 Replication protein A interacting N-terminal Peptidase_M48_N PF16491.5 NODE_71026_length_222_cov_2.310160_g63085_i0reverse_frame_2 - 0.045 13.6 1.3 0.057 13.3 1.3 1.0 1 0 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices Serglycin PF04360.12 NODE_71025_length_222_cov_2.310160_g63084_i0forward_frame_2 - 0.0007 19.6 0.4 0.00075 19.5 0.4 1.1 1 0 0 1 1 1 1 Serglycin DUF4719 PF15843.5 NODE_71025_length_222_cov_2.310160_g63084_i0forward_frame_2 - 0.038 14.1 0.4 0.043 13.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) DUF5315 PF17242.2 NODE_71021_length_222_cov_2.352941_g63080_i0forward_frame_2 - 0.025 14.4 0.1 0.032 14.0 0.1 1.1 1 0 0 1 1 1 0 Disordered region of unknown function (DUF5315) KRAB PF01352.27 NODE_71021_length_222_cov_2.352941_g63080_i0forward_frame_2 - 0.038 13.6 0.5 0.056 13.1 0.5 1.2 1 0 0 1 1 1 0 KRAB box CAP_N PF01213.19 NODE_71018_length_222_cov_2.475936_g63077_i0forward_frame_3 - 1.6 8.1 5.8 1.6 8.1 5.8 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal ALMS_motif PF15309.6 NODE_71014_length_222_cov_2.529412_g63073_i0reverse_frame_3 - 2.4e-06 28.1 1.6 2.4e-06 28.0 1.6 1.1 1 0 0 1 1 1 1 ALMS motif AroM PF07302.11 NODE_71014_length_222_cov_2.529412_g63073_i0reverse_frame_3 - 0.14 11.5 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 AroM protein Porin_OmpG PF09381.10 NODE_71012_length_222_cov_2.631016_g63071_i0reverse_frame_2 - 1.6e-17 64.2 0.1 1.9e-17 64.0 0.1 1.0 1 0 0 1 1 1 1 Outer membrane protein G (OmpG) DUF1233 PF06806.12 NODE_71009_length_222_cov_2.828877_g63068_i0reverse_frame_2 - 0.094 12.3 0.4 0.14 11.8 0.1 1.5 2 0 0 2 2 2 0 Putative excisionase (DUF1233) Nramp PF01566.18 NODE_71009_length_222_cov_2.828877_g63068_i0forward_frame_3 - 3.9e-24 85.3 1.7 4.3e-24 85.2 1.7 1.0 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein HTH_1 PF00126.27 NODE_71003_length_222_cov_2.930481_g63062_i0reverse_frame_2 - 8.5e-12 44.8 0.2 1.1e-11 44.5 0.2 1.2 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Glyco_hydro_14 PF01373.17 NODE_71003_length_222_cov_2.930481_g63062_i0forward_frame_2 - 0.19 10.7 0.1 0.2 10.6 0.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 14 CAF1 PF04857.20 NODE_71000_length_222_cov_3.048128_g63059_i0reverse_frame_3 - 1.3e-07 31.1 0.0 1.4e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 CAF1 family ribonuclease PSI_PSAK PF01241.18 NODE_71000_length_222_cov_3.048128_g63059_i0forward_frame_3 - 0.13 12.3 0.0 0.17 11.9 0.0 1.4 1 1 0 1 1 1 0 Photosystem I psaG / psaK TerC PF03741.16 NODE_70999_length_222_cov_3.106952_g63058_i0reverse_frame_2 - 0.026 14.2 0.4 0.027 14.1 0.4 1.1 1 0 0 1 1 1 0 Integral membrane protein TerC family PND PF17949.1 NODE_70998_length_222_cov_3.197861_g63057_i0forward_frame_3 - 0.00078 19.7 0.0 0.00083 19.6 0.0 1.1 1 0 0 1 1 1 1 FANCM pseudonuclease domain Hepatitis_core PF00906.20 NODE_70994_length_222_cov_3.406417_g63053_i0forward_frame_2 - 0.16 11.5 0.1 0.18 11.3 0.1 1.0 1 0 0 1 1 1 0 Hepatitis core antigen Phage_holin_2_2 PF10746.9 NODE_70993_length_222_cov_3.411765_g63052_i0reverse_frame_2 - 0.22 11.2 5.1 1.9 8.2 0.5 2.2 2 0 0 2 2 2 0 Phage holin T7 family, holin superfamily II MLD PF11647.8 NODE_70993_length_222_cov_3.411765_g63052_i0reverse_frame_2 - 0.23 11.7 1.6 15 6.0 0.2 2.1 2 0 0 2 2 2 0 Membrane Localization Domain LRR_6 PF13516.6 NODE_70993_length_222_cov_3.411765_g63052_i0forward_frame_2 - 7.6e-05 22.5 2.2 0.23 11.6 0.0 2.4 2 0 0 2 2 2 2 Leucine Rich repeat LRR_8 PF13855.6 NODE_70993_length_222_cov_3.411765_g63052_i0forward_frame_2 - 0.00013 21.6 3.5 0.01 15.6 3.6 2.2 1 1 0 1 1 1 1 Leucine rich repeat LRR_1 PF00560.33 NODE_70993_length_222_cov_3.411765_g63052_i0forward_frame_2 - 0.00023 21.3 2.2 0.46 11.2 0.2 2.6 2 0 0 2 2 2 2 Leucine Rich Repeat LRR_4 PF12799.7 NODE_70993_length_222_cov_3.411765_g63052_i0forward_frame_2 - 0.0003 21.1 3.8 0.0012 19.2 3.8 1.9 1 1 0 1 1 1 1 Leucine Rich repeats (2 copies) CFEM PF05730.11 NODE_70988_length_222_cov_3.844920_g63047_i0reverse_frame_3 - 0.02 15.0 0.4 0.024 14.7 0.4 1.2 1 0 0 1 1 1 0 CFEM domain COX8 PF02285.15 NODE_70987_length_222_cov_3.925134_g63046_i0reverse_frame_3 - 0.17 11.8 0.5 0.28 11.1 0.5 1.3 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII Lamprin PF06403.11 NODE_70980_length_222_cov_4.925134_g63039_i0reverse_frame_2 - 1.9 8.4 7.4 5.2 7.0 7.4 1.6 1 1 0 1 1 1 0 Lamprin DUF2116 PF09889.9 NODE_70978_length_222_cov_6.529412_g63037_i0reverse_frame_3 - 0.32 11.0 2.1 0.53 10.3 2.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) IKI3 PF04762.12 NODE_70977_length_222_cov_7.368984_g63036_i0forward_frame_3 - 0.25 9.3 0.8 0.26 9.2 0.8 1.0 1 0 0 1 1 1 0 IKI3 family TF_AP-2 PF03299.14 NODE_70976_length_222_cov_12.727273_g63035_i0forward_frame_3 - 0.0043 17.0 0.2 0.0045 17.0 0.2 1.1 1 0 0 1 1 1 1 Transcription factor AP-2 HEAT PF02985.22 NODE_70976_length_222_cov_12.727273_g63035_i0forward_frame_3 - 0.026 14.7 0.1 0.064 13.5 0.0 1.7 2 0 0 2 2 2 0 HEAT repeat DUF5049 PF16468.5 NODE_70976_length_222_cov_12.727273_g63035_i0forward_frame_3 - 0.083 12.8 0.0 0.13 12.1 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5049) muHD PF10291.9 NODE_70974_length_222_cov_20.187166_g63033_i0forward_frame_2 - 0.04 13.4 0.2 0.044 13.2 0.2 1.0 1 0 0 1 1 1 0 Muniscin C-terminal mu homology domain Phage_T4_gp36 PF03903.13 NODE_70974_length_222_cov_20.187166_g63033_i0forward_frame_2 - 0.082 12.9 0.0 0.085 12.8 0.0 1.0 1 0 0 1 1 1 0 Phage T4 tail fibre Kinesin_assoc PF16183.5 NODE_70967_length_222_cov_29.732620_g63026_i0reverse_frame_3 - 0.0022 18.2 0.0 0.0023 18.1 0.0 1.1 1 0 0 1 1 1 1 Kinesin-associated DUF3667 PF12412.8 NODE_70967_length_222_cov_29.732620_g63026_i0forward_frame_2 - 0.19 11.2 0.0 0.19 11.2 0.0 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF3667) LapA_dom PF06305.11 NODE_70966_length_222_cov_31.181818_g63025_i0reverse_frame_2 - 0.035 13.9 0.0 0.044 13.6 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain CALCOCO1 PF07888.11 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.00074 18.5 9.5 0.00074 18.5 9.5 1.0 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like TPR_MLP1_2 PF07926.12 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.013 15.6 6.9 0.014 15.5 6.9 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein ZapD PF07072.11 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.035 13.8 2.9 0.038 13.7 2.9 1.1 1 0 0 1 1 1 0 Cell division protein DUF4795 PF16043.5 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.058 13.0 7.3 0.064 12.8 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF5082 PF16888.5 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.059 13.6 6.7 0.058 13.7 3.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Tho2 PF11262.8 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.073 12.3 8.8 0.083 12.1 8.8 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 AAA_23 PF13476.6 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.075 13.5 12.0 0.079 13.4 12.0 1.0 1 0 0 1 1 1 0 AAA domain DUF1664 PF07889.12 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.1 12.6 3.0 0.12 12.5 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.11 12.9 4.2 0.19 12.2 4.2 1.6 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) GrpE PF01025.19 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.14 11.8 11.3 0.21 11.2 11.3 1.4 1 1 1 2 2 2 0 GrpE Lge1 PF11488.8 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.19 12.0 7.5 0.27 11.4 7.5 1.3 1 1 0 1 1 1 0 Transcriptional regulatory protein LGE1 Spc24 PF08286.11 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.23 11.7 5.1 0.29 11.4 5.1 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF3450 PF11932.8 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.24 10.7 5.8 0.25 10.6 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Prefoldin_2 PF01920.20 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.44 10.5 13.5 0.92 9.5 0.6 2.1 1 1 1 2 2 2 0 Prefoldin subunit DivIC PF04977.15 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.44 10.3 7.8 0.78 9.6 7.8 1.5 1 1 0 1 1 1 0 Septum formation initiator DUF4337 PF14235.6 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.62 10.2 6.9 0.64 10.1 6.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) TMPIT PF07851.13 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.66 9.2 5.0 0.65 9.2 5.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF3847 PF12958.7 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.91 9.7 12.4 0.43 10.7 6.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3847) Med21 PF11221.8 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 1 9.6 7.0 1.3 9.3 7.0 1.2 1 0 0 1 1 1 0 Subunit 21 of Mediator complex GTP-bdg_M PF16360.5 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 1.4 9.5 8.9 0.26 11.9 1.8 2.1 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region DUF3987 PF13148.6 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 1.8 7.5 6.3 2 7.3 6.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Daxx PF03344.15 NODE_70952_length_222_cov_46.502674_g63011_i0reverse_frame_3 - 0.0089 16.1 1.7 0.01 15.9 1.7 1.3 1 1 0 1 1 1 1 Daxx N-terminal Rassf1C-interacting domain Noggin PF05806.12 NODE_70950_length_222_cov_47.802139_g63009_i0reverse_frame_2 - 0.17 11.8 5.4 0.16 11.9 5.4 1.1 1 0 0 1 1 1 0 Noggin Glyco_transf_36 PF06165.11 NODE_70950_length_222_cov_47.802139_g63009_i0forward_frame_2 - 0.048 13.1 0.0 0.05 13.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 36 Myosin_tail_1 PF01576.19 NODE_70944_length_222_cov_53.283422_g63003_i0forward_frame_2 - 0.012 13.5 0.1 0.012 13.4 0.1 1.0 1 0 0 1 1 1 0 Myosin tail Het-C PF07217.11 NODE_70944_length_222_cov_53.283422_g63003_i0forward_frame_2 - 0.15 10.6 0.0 0.16 10.5 0.0 1.0 1 0 0 1 1 1 0 Heterokaryon incompatibility protein Het-C FYRN PF05964.14 NODE_70940_length_222_cov_55.893048_g62999_i0reverse_frame_3 - 0.15 11.9 1.6 0.22 11.4 1.6 1.2 1 0 0 1 1 1 0 F/Y-rich N-terminus GPHH PF16905.5 NODE_70939_length_222_cov_55.989305_g62998_i0reverse_frame_2 - 8.5e-09 35.1 0.0 1.1e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 Voltage-dependent L-type calcium channel, IQ-associated EF-hand_1 PF00036.32 NODE_70939_length_222_cov_55.989305_g62998_i0reverse_frame_2 - 0.013 15.0 0.7 0.019 14.5 0.1 1.6 2 0 0 2 2 2 0 EF hand EF-hand_6 PF13405.6 NODE_70939_length_222_cov_55.989305_g62998_i0reverse_frame_2 - 0.039 13.9 0.4 0.097 12.7 0.1 1.8 2 0 0 2 2 2 0 EF-hand domain Ank_2 PF12796.7 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 1.7e-06 28.5 0.1 1.9e-06 28.4 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 8.8e-06 25.9 0.1 1.1e-05 25.6 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 3.9e-05 23.9 0.7 0.00027 21.3 0.1 2.0 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.0023 18.5 0.0 0.0035 17.9 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.0066 16.9 0.2 0.022 15.3 0.1 1.8 2 0 0 2 2 2 1 Ankyrin repeat Asparaginase_II PF06089.12 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.0082 15.2 0.3 0.0092 15.0 0.3 1.0 1 0 0 1 1 1 1 L-asparaginase II PK_C PF02887.16 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.034 14.4 0.1 0.036 14.3 0.1 1.1 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain Protocadherin PF08374.11 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.046 13.7 0.1 0.048 13.6 0.1 1.1 1 0 0 1 1 1 0 Protocadherin DUF1980 PF09323.10 NODE_70929_length_222_cov_80.213904_g62988_i0forward_frame_2 - 1.9 8.4 7.0 2.6 7.9 7.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF2441 PF10386.9 NODE_70928_length_222_cov_81.556150_g62987_i0forward_frame_3 - 0.0064 16.5 0.2 0.0085 16.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2441) OmdA PF13376.6 NODE_70928_length_222_cov_81.556150_g62987_i0forward_frame_2 - 0.043 13.8 0.1 0.059 13.4 0.1 1.3 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated Aa_trans PF01490.18 NODE_70927_length_222_cov_94.807487_g62986_i0reverse_frame_3 - 0.02 13.6 6.1 0.022 13.5 6.1 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein PRIMA1 PF16101.5 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_2 - 2.2 8.4 7.9 2.6 8.1 7.9 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_2 - 4.3 6.7 10.5 5 6.5 10.5 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_2 - 7.2 6.6 6.9 7.9 6.5 6.9 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator DUF3824 PF12868.7 NODE_70921_length_222_cov_113.379679_g62980_i0forward_frame_2 - 0.63 10.7 17.7 0.78 10.4 17.7 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) DUF333 PF03891.15 NODE_70919_length_222_cov_117.524064_g62978_i0forward_frame_2 - 0.04 14.1 0.0 1.2 9.3 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF333) DUF2523 PF10734.9 NODE_70915_length_222_cov_131.588235_g62974_i0reverse_frame_3 - 0.019 15.5 0.0 0.027 15.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2523) MVP_shoulder PF11978.8 NODE_70914_length_222_cov_138.139037_g62973_i0reverse_frame_2 - 0.03 14.3 0.0 0.032 14.2 0.0 1.1 1 0 0 1 1 1 0 Shoulder domain DUF4560 PF15118.6 NODE_70913_length_222_cov_157.844920_g62972_i0reverse_frame_2 - 0.013 15.3 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4560) Dpy19 PF10034.9 NODE_70910_length_222_cov_174.213904_g62969_i0forward_frame_2 - 0.028 12.7 0.1 0.029 12.6 0.1 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation Prok-JAB PF14464.6 NODE_70904_length_222_cov_241.668449_g62963_i0reverse_frame_3 - 0.0014 18.4 0.1 0.0014 18.3 0.1 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain HSA PF07529.13 NODE_70904_length_222_cov_241.668449_g62963_i0reverse_frame_3 - 0.018 15.4 0.2 0.023 15.0 0.2 1.1 1 0 0 1 1 1 0 HSA DUF3873 PF12989.7 NODE_70903_length_222_cov_252.844920_g62962_i0forward_frame_2 - 0.034 14.5 0.0 0.053 13.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3873) Toxin_23 PF08093.11 NODE_70902_length_222_cov_357.748663_g62961_i0forward_frame_2 - 0.015 15.4 0.6 0.015 15.4 0.6 1.6 2 0 0 2 2 2 0 Magi 5 toxic peptide family zf-XS PF03470.14 ORF99990 - 0.039 14.2 0.0 0.058 13.7 0.0 1.3 1 0 0 1 1 1 0 XS zinc finger domain TMEM51 PF15345.6 ORF99990 - 0.2 11.5 0.6 0.21 11.4 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 Phtf-FEM1B_bdg PF12129.8 ORF99661 - 1.3 8.8 4.2 1.6 8.6 4.2 1.2 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor PH PF00169.29 ORF99436 - 6.8e-07 29.7 1.0 9e-07 29.4 1.0 1.2 1 0 0 1 1 1 1 PH domain PH_15 PF17339.2 ORF99436 - 0.067 13.1 2.0 0.077 12.9 1.4 1.4 1 1 0 1 1 1 0 PH domain Orexin PF02072.15 ORF99433 - 0.032 14.2 0.1 0.034 14.1 0.1 1.1 1 0 0 1 1 1 0 Prepro-orexin DUF1422 PF07226.11 ORF99189 - 0.052 13.6 0.6 0.12 12.4 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1422) RIC3 PF15361.6 ORF99189 - 6.3 7.2 7.7 0.36 11.2 3.2 1.4 2 0 0 2 2 2 0 Resistance to inhibitors of cholinesterase homologue 3 DBB PF14545.6 ORF99083 - 0.081 12.8 0.1 0.081 12.8 0.1 1.1 1 0 0 1 1 1 0 Dof, BCAP, and BANK (DBB) motif, FAM72 PF14976.6 ORF98715 - 0.0045 17.1 0.1 0.0047 17.1 0.1 1.0 1 0 0 1 1 1 1 FAM72 protein Cupredoxin_1 PF13473.6 ORF9865 - 0.049 13.8 0.2 0.053 13.6 0.2 1.1 1 0 0 1 1 1 0 Cupredoxin-like domain DUF4786 PF16027.5 ORF98634 - 0.049 14.2 0.1 0.05 14.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4786) REV PF00424.18 ORF98091 - 0.31 11.1 3.6 0.41 10.7 3.6 1.5 1 1 0 1 1 1 0 REV protein (anti-repression trans-activator protein) Acetyltransf_16 PF05301.11 ORF97838 - 1.7e-09 37.7 0.0 1.7e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Plasmodium_HRP PF05403.11 ORF97605 - 0.0026 17.6 2.4 0.0029 17.4 2.4 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF97605 - 0.067 13.2 6.6 1.1 9.2 0.7 2.3 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain LAGLIDADG_WhiA PF14527.6 ORF97605 - 4.7 7.4 10.8 10 6.3 1.6 2.2 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain DUF4375 PF14300.6 ORF97605 - 8.7 6.6 8.2 18 5.7 5.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) Shisa PF13908.6 ORF97550 - 0.1 12.8 0.0 0.11 12.7 0.0 1.0 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator TMEM208_SND2 PF05620.11 ORF97312 - 0.006 16.4 0.1 0.0068 16.2 0.1 1.1 1 0 0 1 1 1 1 SRP-independent targeting protein 2/TMEM208 DUF3685 PF12452.8 ORF97046 - 0.13 11.9 3.4 0.14 11.8 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) LMBR1 PF04791.16 ORF97046 - 0.27 10.1 1.9 0.3 10.0 1.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Nrap_D3 PF17404.2 ORF96766 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF96766 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R TLC PF03219.14 ORF96655 - 0.023 13.5 1.7 0.023 13.4 1.7 1.0 1 0 0 1 1 1 0 TLC ATP/ADP transporter COX8 PF02285.15 ORF96655 - 0.24 11.3 0.5 0.24 11.3 0.5 2.0 2 0 0 2 2 2 0 Cytochrome oxidase c subunit VIII Ribophorin_II PF05817.14 ORF96655 - 1.1 7.8 5.0 1.3 7.5 5.0 1.0 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II DUF4131 PF13567.6 ORF96311 - 9 5.9 6.6 9.9 5.8 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) HMA PF00403.26 ORF96310 - 9.5e-06 26.0 0.0 1.2e-05 25.6 0.0 1.2 1 0 0 1 1 1 1 Heavy-metal-associated domain DUF3564 PF12087.8 ORF96094 - 0.025 14.5 0.0 0.029 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3564) Nrap_D3 PF17404.2 ORF96053 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF96053 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R DUF3926 PF13080.6 ORF95934 - 0.4 10.7 2.5 0.33 10.9 0.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3926) MORN PF02493.20 ORF95884 - 2e-17 61.9 13.7 3.7e-06 26.5 0.2 4.0 4 0 0 4 4 4 4 MORN repeat Pkinase PF00069.25 ORF95059 - 5.7e-22 78.3 0.6 5.9e-22 78.3 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95059 - 1e-14 54.5 0.2 1.1e-14 54.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF95059 - 0.00021 20.7 0.0 0.00021 20.7 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF95059 - 0.0052 15.6 0.1 0.0057 15.5 0.1 1.0 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF95059 - 0.026 14.2 0.0 0.029 14.0 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF95059 - 0.032 13.6 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 Kinase-like YrbL-PhoP_reg PF10707.9 ORF95059 - 0.064 12.8 0.0 0.068 12.7 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL PriA_CRR PF18319.1 ORF94994 - 0.033 14.2 1.9 0.033 14.2 1.9 1.9 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain MBT PF02820.18 ORF94795 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat Vitelline_membr PF10542.9 ORF946 - 0.063 13.2 5.0 2.9 7.8 1.1 2.2 2 0 0 2 2 2 0 Vitelline membrane cysteine-rich region GDC-P PF02347.16 ORF94442 - 0.035 12.9 0.3 0.036 12.9 0.3 1.0 1 0 0 1 1 1 0 Glycine cleavage system P-protein Zn_Tnp_IS1 PF03811.13 ORF93973 - 0.052 13.3 1.0 0.084 12.6 1.0 1.5 1 1 0 1 1 1 0 InsA N-terminal domain CDC45 PF02724.14 ORF93792 - 4 5.6 8.9 4.1 5.6 8.9 1.0 1 0 0 1 1 1 0 CDC45-like protein TPR_14 PF13428.6 ORF93685 - 0.0073 17.0 1.2 0.012 16.4 1.1 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat 7tm_6 PF02949.20 ORF93652 - 0.11 11.6 2.1 0.11 11.5 2.1 1.0 1 0 0 1 1 1 0 7tm Odorant receptor Fer4_22 PF17179.4 ORF93512 - 0.15 12.9 0.1 0.17 12.8 0.1 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain Metal_resist PF13801.6 ORF93394 - 0.23 11.6 0.6 0.36 11.0 0.6 1.3 1 0 0 1 1 1 0 Heavy-metal resistance Nrap_D3 PF17404.2 ORF91886 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF91886 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R MBT PF02820.18 ORF91777 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat Zip PF02535.22 ORF91197 - 1.4 8.1 2.5 1.3 8.1 2.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter GerE PF00196.19 ORF91115 - 1.1e-25 88.9 0.9 1.2e-25 88.8 0.9 1.0 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 ORF91115 - 3e-08 33.2 0.1 4.5e-08 32.6 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 ORF91115 - 1.1e-06 28.1 0.5 1.4e-06 27.7 0.5 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 ORF91115 - 3.3e-06 26.7 0.0 4.5e-06 26.3 0.0 1.3 1 1 0 1 1 1 1 Homeodomain-like domain Sigma70_r4 PF04545.16 ORF91115 - 3.8e-06 26.3 0.7 1.2e-05 24.7 0.7 1.8 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_20 PF12840.7 ORF91115 - 0.00013 22.0 0.1 0.00016 21.6 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_10 PF04967.12 ORF91115 - 0.00067 19.4 0.7 0.0061 16.3 0.1 2.0 1 1 1 2 2 2 1 HTH DNA binding domain HTH_11 PF08279.12 ORF91115 - 0.0012 18.7 0.7 0.002 18.1 0.7 1.4 1 1 0 1 1 1 1 HTH domain HTH_28 PF13518.6 ORF91115 - 0.0021 18.2 0.0 0.003 17.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_terminase PF10668.9 ORF91115 - 0.0023 17.9 0.0 0.0036 17.3 0.0 1.3 1 0 0 1 1 1 1 Phage terminase small subunit HTH_38 PF13936.6 ORF91115 - 0.0031 17.3 0.0 0.0054 16.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 ORF91115 - 0.0038 17.2 0.0 0.0054 16.7 0.0 1.4 1 1 0 1 1 1 1 Winged helix-turn helix SAM_DrpA PF18255.1 ORF91115 - 0.0074 16.5 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 DNA processing protein A sterile alpha motif domain MarR PF01047.22 ORF91115 - 0.0096 15.8 0.3 0.014 15.3 0.3 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 ORF91115 - 0.013 15.4 0.4 0.016 15.0 0.4 1.2 1 0 0 1 1 1 0 MarR family Trans_reg_C PF00486.28 ORF91115 - 0.015 15.3 1.3 0.11 12.6 1.3 2.0 1 1 0 1 1 1 0 Transcriptional regulatory protein, C terminal HTH_Crp_2 PF13545.6 ORF91115 - 0.019 15.0 0.4 0.14 12.2 0.1 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain RP-C PF03428.13 ORF91115 - 0.033 13.9 0.2 0.048 13.3 0.2 1.4 1 1 0 1 1 1 0 Replication protein C N-terminal domain HTH_40 PF14493.6 ORF91115 - 0.034 14.6 0.1 0.041 14.3 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_ECF PF07638.11 ORF91115 - 0.034 14.0 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 ECF sigma factor HTH_7 PF02796.15 ORF91115 - 0.042 13.9 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase TnsD PF15978.5 ORF91115 - 0.048 12.6 0.1 0.053 12.5 0.1 1.0 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_AsnC-type PF13404.6 ORF91115 - 0.049 13.5 0.0 0.1 12.4 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_12 PF08461.10 ORF91115 - 0.056 13.4 0.1 0.074 13.0 0.1 1.3 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_36 PF13730.6 ORF91115 - 0.075 13.0 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 ORF91115 - 0.076 13.1 0.7 0.1 12.7 0.1 1.5 2 0 0 2 2 1 0 Helix-turn-helix TrpP PF17099.5 ORF90525 - 0.0069 16.2 1.0 0.0072 16.1 1.0 1.0 1 0 0 1 1 1 1 Tryptophan transporter TrpP Antimicrobial25 PF16839.5 ORF90306 - 0.23 11.6 6.9 0.29 11.2 6.9 1.2 1 0 0 1 1 1 0 Nematode antimicrobial peptide zf_PR_Knuckle PF18445.1 ORF89877 - 0.036 13.9 3.1 0.061 13.2 3.1 1.4 1 0 0 1 1 1 0 PR zinc knuckle motif Granulin PF00396.18 ORF89777 - 0.022 15.1 1.1 0.034 14.5 1.1 1.3 1 0 0 1 1 1 0 Granulin Nrap_D3 PF17404.2 ORF89426 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF89426 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R T3SS_needle_E PF08988.10 ORF89407 - 0.053 13.7 0.0 0.085 13.0 0.0 1.3 1 0 0 1 1 1 0 Type III secretion system, cytoplasmic E component of needle ALG3 PF05208.13 ORF89130 - 3.9e-06 26.5 0.1 4.5e-06 26.3 0.1 1.1 1 0 0 1 1 1 1 ALG3 protein CRF PF00473.17 ORF89130 - 0.041 14.0 0.0 0.061 13.4 0.0 1.3 1 0 0 1 1 1 0 Corticotropin-releasing factor family Bac_small_YrzI PF09501.10 ORF88467 - 0.33 11.1 4.6 0.63 10.2 4.6 1.5 1 0 0 1 1 1 0 Probable sporulation protein (Bac_small_yrzI) TGBp3 PF02495.17 ORF86862 - 0.015 14.9 0.4 0.02 14.5 0.4 1.4 1 0 0 1 1 1 0 Triple gene block 3 HAP1_N PF04849.13 ORF86298 - 0.0047 16.2 2.8 0.0055 16.0 2.8 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region SlyX PF04102.12 ORF86298 - 0.031 14.9 2.0 0.046 14.4 2.0 1.3 1 1 0 1 1 1 0 SlyX TMEM192 PF14802.6 ORF86298 - 0.12 11.5 0.2 0.16 11.0 0.2 1.2 1 0 0 1 1 1 0 TMEM192 family INCENP_ARK-bind PF03941.15 ORF86298 - 1.7 8.6 6.7 9.8 6.2 0.1 2.2 2 0 0 2 2 2 0 Inner centromere protein, ARK binding region IL8 PF00048.20 ORF85847 - 0.051 13.7 0.1 0.074 13.2 0.1 1.2 1 0 0 1 1 1 0 Small cytokines (intecrine/chemokine), interleukin-8 like PARM PF17061.5 ORF85658 - 0.16 12.1 0.2 0.18 11.9 0.2 1.1 1 0 0 1 1 1 0 PARM EST1_DNA_bind PF10373.9 ORF85054 - 0.075 12.5 1.0 0.088 12.3 1.0 1.0 1 0 0 1 1 1 0 Est1 DNA/RNA binding domain Nrap_D3 PF17404.2 ORF84623 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF84623 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R MBT PF02820.18 ORF84324 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat DUF2105 PF09878.9 ORF84206 - 0.0099 15.6 2.4 0.011 15.4 2.4 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2105) zf-XS PF03470.14 ORF84028 - 0.039 14.2 0.0 0.058 13.7 0.0 1.3 1 0 0 1 1 1 0 XS zinc finger domain TMEM51 PF15345.6 ORF84028 - 0.2 11.5 0.6 0.21 11.4 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 Med16 PF11635.8 ORF83757 - 0.28 9.1 0.8 0.26 9.1 0.8 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 UPF0300 PF08594.10 ORF83738 - 0.026 13.8 0.0 0.026 13.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) NMDAR2_C PF10565.9 ORF8341 - 0.015 14.3 2.4 0.015 14.2 2.4 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus SHIPPO-rpt PF07004.12 ORF82889 - 0.01 16.7 6.7 0.031 15.2 0.1 3.2 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat PGPGW PF09656.10 ORF82889 - 4.1 7.0 5.4 4.3 6.9 0.1 2.1 2 0 0 2 2 2 0 Putative transmembrane protein (PGPGW) PriA_CRR PF18319.1 ORF82730 - 0.033 14.2 1.9 0.033 14.2 1.9 1.9 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain RimK PF08443.11 ORF82288 - 7.7e-05 22.4 0.1 7.7e-05 22.4 0.1 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain R2K_2 PF18299.1 ORF82288 - 0.075 12.9 0.2 0.097 12.5 0.1 1.3 1 1 0 1 1 1 0 ATP-grasp domain, R2K clade family 2 DB_JBP1 PF18526.1 ORF82005 - 0.0028 17.6 0.0 0.0031 17.5 0.0 1.1 1 0 0 1 1 1 1 Thymine dioxygenase JBP1 DNA-binding domain Metal_resist PF13801.6 ORF81938 - 0.24 11.6 0.6 0.36 11.0 0.6 1.3 1 0 0 1 1 1 0 Heavy-metal resistance AbrB PF05145.12 ORF8191 - 2.8e-22 79.1 4.9 3e-22 79.0 4.9 1.0 1 0 0 1 1 1 1 Transition state regulatory protein AbrB Carb_kinase PF01256.17 ORF81421 - 0.0021 17.5 0.0 0.0021 17.5 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate kinase Phos_pyr_kin PF08543.12 ORF81421 - 0.099 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase FoP_duplication PF13865.6 ORF81116 - 0.007 16.9 0.4 0.013 16.0 0.4 1.5 1 0 0 1 1 1 1 C-terminal duplication domain of Friend of PRMT1 LtrA PF06772.11 ORF81069 - 0.17 11.1 0.0 0.19 10.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial low temperature requirement A protein (LtrA) AMP-binding_C PF13193.6 ORF80856 - 0.01 16.8 0.4 0.014 16.3 0.4 1.2 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain DIM PF08194.12 ORF80856 - 0.054 13.7 0.0 0.093 12.9 0.0 1.5 1 0 0 1 1 1 0 DIM protein LysR_substrate PF03466.20 ORF80501 - 0.0093 15.3 0.0 0.01 15.2 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain UPF0300 PF08594.10 ORF80246 - 0.026 13.8 0.0 0.026 13.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) RuvA_N PF01330.21 ORF80110 - 0.036 14.2 0.0 0.046 13.8 0.0 1.3 1 1 0 1 1 1 0 RuvA N terminal domain Viral_DNA_bi PF02236.17 ORF793 - 0.096 12.9 0.1 0.14 12.4 0.0 1.4 1 1 0 1 1 1 0 Viral DNA-binding protein, all alpha domain zf-SAP30 PF13866.6 ORF7881 - 0.17 12.1 4.3 0.95 9.6 0.9 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger SLC35F PF06027.12 ORF78290 - 0.017 14.6 2.9 0.018 14.6 2.9 1.0 1 0 0 1 1 1 0 Solute carrier family 35 DUF1658 PF07871.11 ORF77879 - 3 7.9 4.9 1.9 8.6 1.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) Thioredoxin_6 PF13848.6 ORF77855 - 0.011 15.6 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain zf-SAP30 PF13866.6 ORF7723 - 0.17 12.1 4.3 0.95 9.6 0.9 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger CAS_CSE1 PF03378.15 ORF76848 - 0.00015 20.4 0.0 0.00016 20.3 0.0 1.0 1 0 0 1 1 1 1 CAS/CSE protein, C-terminus PARM PF17061.5 ORF76730 - 0.16 12.1 0.2 0.18 11.9 0.2 1.1 1 0 0 1 1 1 0 PARM DUF1180 PF06679.12 ORF76028 - 2.1 8.8 3.4 2.2 8.7 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) RNaseH_like PF04308.12 ORF75883 - 0.0075 16.2 0.8 2.2 8.2 0.1 2.1 2 0 0 2 2 2 2 Ribonuclease H-like zf-SAP30 PF13866.6 ORF75758 - 0.17 12.1 4.3 0.95 9.6 0.9 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger IQCJ-SCHIP1 PF15157.6 ORF75486 - 3.3 7.5 6.2 4.1 7.2 6.2 1.2 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif LEAP-2 PF07359.11 ORF75144 - 0.064 13.1 1.0 0.082 12.7 1.0 1.2 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Carb_kinase PF01256.17 ORF75050 - 0.0021 17.5 0.0 0.0021 17.5 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate kinase Phos_pyr_kin PF08543.12 ORF75050 - 0.099 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase LEAP-2 PF07359.11 ORF75034 - 0.064 13.1 1.0 0.082 12.7 1.0 1.2 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Sugar_tr PF00083.24 ORF75 - 5.9e-09 35.3 1.1 6.4e-09 35.2 1.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF75 - 3.2e-07 29.6 3.0 3.4e-07 29.5 3.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF75 - 0.017 13.4 0.2 0.018 13.3 0.2 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Sugar_tr PF00083.24 ORF74953 - 6.2e-05 22.1 0.0 6.2e-05 22.1 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter S-antigen PF05756.11 ORF74953 - 0.0046 17.3 0.4 0.005 17.2 0.4 1.2 1 0 0 1 1 1 1 S-antigen protein Peptidase_S74 PF13884.6 ORF74953 - 0.0086 16.4 0.5 0.01 16.2 0.5 1.2 1 0 0 1 1 1 1 Chaperone of endosialidase DUF4974 PF16344.5 ORF74953 - 0.031 14.3 0.4 0.049 13.6 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4974) S_4TM PF18159.1 ORF74953 - 0.11 11.8 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DnaJ PF00226.31 ORF74236 - 9.6e-06 25.6 0.1 1.2e-05 25.3 0.1 1.2 1 0 0 1 1 1 1 DnaJ domain S_2TMBeta PF18153.1 ORF74165 - 0.88 9.3 3.1 1.1 9.1 3.1 1.0 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain DUF5360 PF17314.2 ORF7406 - 0.067 13.3 0.1 0.078 13.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5360) RD3 PF14473.6 ORF73511 - 0.02 14.7 0.1 0.02 14.7 0.1 1.1 1 0 0 1 1 1 0 RD3 protein Gemin6 PF06372.12 ORF72821 - 0.08 12.5 1.1 0.088 12.3 1.1 1.0 1 0 0 1 1 1 0 Gemin6 protein zf-SAP30 PF13866.6 ORF7275 - 0.17 12.1 4.3 0.95 9.6 0.9 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger Nrap_D3 PF17404.2 ORF72591 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF72591 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R DUF3918 PF13056.6 ORF72272 - 0.19 11.3 0.1 0.19 11.3 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) RuvB_N PF05496.12 ORF71903 - 0.083 12.6 0.4 0.091 12.5 0.4 1.1 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Fungal_TACC PF12709.7 ORF71903 - 1.4 9.5 7.9 0.37 11.3 1.3 2.0 1 1 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Cep57_MT_bd PF06657.13 ORF71903 - 2.9 8.4 11.1 11 6.5 8.4 2.1 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 DUF3328 PF11807.8 ORF71291 - 0.67 9.7 4.4 0.7 9.6 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) Med26 PF08711.11 ORF70965 - 1.6e-05 24.8 0.0 2.6e-05 24.2 0.0 1.3 1 1 0 1 1 1 1 TFIIS helical bundle-like domain Rad10 PF03834.14 ORF70881 - 0.061 13.4 0.1 0.073 13.1 0.1 1.0 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) CCG PF02754.16 ORF70685 - 0.54 10.5 1.9 2.6 8.3 1.8 1.9 1 1 1 2 2 2 0 Cysteine-rich domain Vir_act_alpha_C PF10400.9 ORF70470 - 0.0022 18.6 0.1 0.0028 18.3 0.1 1.2 1 0 0 1 1 1 1 Virulence activator alpha C-term HEAT PF02985.22 ORF70371 - 0.025 14.8 0.0 0.07 13.4 0.0 1.7 2 0 0 2 2 2 0 HEAT repeat TAF6_C PF07571.13 ORF70371 - 0.14 12.5 0.1 0.22 11.8 0.1 1.5 1 1 0 1 1 1 0 TAF6 C-terminal HEAT repeat domain FGFR3_TM PF18123.1 ORF70096 - 0.23 11.0 4.7 0.43 10.1 4.7 1.4 1 0 0 1 1 1 0 Fibroblast growth factor receptor 3 transmembrane domain DUF4684 PF15736.5 ORF70042 - 0.046 12.4 0.1 0.046 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4684) Nrap_D3 PF17404.2 ORF69964 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF69964 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R DUF2634 PF10934.8 ORF69632 - 0.034 14.3 0.1 0.038 14.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2634) Pkinase PF00069.25 ORF69632 - 0.056 12.8 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Glutaredoxin PF00462.24 ORF69522 - 0.0061 16.8 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF5442 PF17514.2 ORF69388 - 0.022 14.9 0.6 0.16 12.2 0.2 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5442) TLC PF03219.14 ORF69316 - 0.023 13.5 1.7 0.023 13.4 1.7 1.0 1 0 0 1 1 1 0 TLC ATP/ADP transporter COX8 PF02285.15 ORF69316 - 0.24 11.3 0.5 0.24 11.3 0.5 2.0 2 0 0 2 2 2 0 Cytochrome oxidase c subunit VIII Ribophorin_II PF05817.14 ORF69316 - 1.1 7.8 5.0 1.3 7.5 5.0 1.0 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II Myb_DNA-binding PF00249.31 ORF68784 - 0.0077 16.4 0.2 0.012 15.8 0.2 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain MtrG PF04210.13 ORF68458 - 0.19 11.6 2.0 0.15 11.9 0.7 1.6 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G DUF4446 PF14584.6 ORF68458 - 0.34 10.9 3.5 0.38 10.7 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) XhlA PF10779.9 ORF68458 - 0.4 10.9 5.1 0.11 12.7 2.0 1.7 2 0 0 2 2 2 0 Haemolysin XhlA DUF3951 PF13131.6 ORF67879 - 0.081 13.1 3.5 0.16 12.2 3.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3951) Phage_holin_3_6 PF07332.11 ORF67879 - 0.86 9.7 4.1 0.99 9.5 4.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III ubiquitin PF00240.23 ORF67592 - 2e-06 27.5 0.1 7.5e-06 25.6 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF67592 - 1.9e-05 25.0 0.1 0.00011 22.6 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Baculo_RING PF05883.11 ORF67592 - 0.024 14.6 0.5 0.025 14.6 0.5 1.1 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain UN_NPL4 PF11543.8 ORF67592 - 0.072 13.6 0.0 0.087 13.3 0.0 1.2 1 1 0 1 1 1 0 Nuclear pore localisation protein NPL4 DUF2237 PF09996.9 ORF67052 - 0.046 13.7 0.0 0.055 13.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2237) Dynein_light PF01221.18 ORF66659 - 3.9e-10 39.9 0.1 4.6e-10 39.7 0.1 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 Aldo_ket_red PF00248.21 ORF66388 - 2.7e-09 36.6 0.3 2.9e-09 36.5 0.3 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF3011 PF11218.8 ORF6572 - 0.0095 15.9 0.2 0.011 15.7 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3011) DEPP PF15343.6 ORF65161 - 0.1 12.7 2.0 0.11 12.5 2.0 1.0 1 0 0 1 1 1 0 Decidual protein induced by progesterone family EBV-NA1 PF02905.14 ORF651 - 0.11 12.3 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Epstein Barr virus nuclear antigen-1, DNA-binding domain eIF3g PF12353.8 ORF64475 - 0.009 16.4 0.2 0.0099 16.3 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit G Copine PF07002.16 ORF64066 - 7.5e-28 97.5 1.3 8e-28 97.4 1.3 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF64066 - 1.5e-06 28.5 0.0 1.7e-06 28.3 0.0 1.0 1 0 0 1 1 1 1 vWA found in TerF C terminus VWA PF00092.28 ORF64066 - 0.02 15.1 0.1 0.021 15.1 0.1 1.1 1 0 0 1 1 1 0 von Willebrand factor type A domain Indigoidine_A PF04227.12 ORF639 - 0.18 11.1 0.0 0.19 11.1 0.0 1.0 1 0 0 1 1 1 0 Indigoidine synthase A like protein Mito_carr PF00153.27 ORF63774 - 6.2e-08 32.4 0.1 6.5e-08 32.4 0.1 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein Prp18 PF02840.15 ORF63637 - 0.1 12.6 0.5 0.13 12.4 0.4 1.3 1 1 0 1 1 1 0 Prp18 domain Pkinase PF00069.25 ORF63422 - 0.0022 17.4 0.1 0.0023 17.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain RTP1_C2 PF10304.9 ORF63422 - 0.016 14.9 0.1 0.031 14.0 0.1 1.5 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks336.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks336.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks336.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks336.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- BPD_transp_1 PF00528.22 ORF63291 - 7.4e-05 22.6 1.2 7.9e-05 22.5 1.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Lig_chan PF00060.26 ORF63291 - 0.099 12.5 0.5 0.16 11.8 0.5 1.3 1 0 0 1 1 1 0 Ligand-gated ion channel MBT PF02820.18 ORF63275 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat BRCT_2 PF16589.5 ORF62957 - 1.1e-05 25.7 0.0 1.3e-05 25.5 0.0 1.0 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 ORF62957 - 0.00081 19.7 0.0 0.00086 19.6 0.0 1.1 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain HpaB_N PF11794.8 ORF62372 - 0.16 11.6 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal HHV-1_VABD PF16852.5 ORF61889 - 7.9 6.6 7.8 0.46 10.5 1.7 2.2 3 1 0 3 3 3 0 Herpes viral adaptor-to-host cellular mRNA binding domain Pico_P2A PF00947.19 ORF61527 - 0.083 12.9 0.0 0.087 12.9 0.0 1.0 1 0 0 1 1 1 0 Picornavirus core protein 2A PI3K_rbd PF00794.18 ORF61321 - 0.085 13.0 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain CheC PF04509.12 ORF61058 - 0.13 12.2 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 CheC-like family Spc24 PF08286.11 ORF60952 - 0.074 13.3 0.0 0.076 13.3 0.0 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Bacillus_PapR PF05968.11 ORF60809 - 0.11 12.4 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Bacillus PapR protein GREB1 PF15782.5 ORF60334 - 0.16 9.1 4.3 0.17 9.0 4.3 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer APC1_C PF18122.1 ORF6020 - 0.037 14.0 0.1 0.046 13.7 0.1 1.2 1 1 0 1 1 1 0 Anaphase-promoting complex sub unit 1 C-terminal domain PIP5K PF01504.18 ORF60023 - 1.2e-08 34.5 0.1 1.2e-08 34.5 0.1 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Glutaredoxin PF00462.24 ORF60020 - 0.0061 16.8 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin Peroxidase_ext PF11895.8 ORF59974 - 0.12 12.4 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Fungal peroxidase extension region DUF5442 PF17514.2 ORF59817 - 0.022 14.9 0.7 0.11 12.7 0.7 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5442) Peptidase_C1 PF00112.23 ORF59730 - 6.5e-15 55.8 6.1 6.9e-15 55.7 6.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF59730 - 0.1 11.4 1.8 0.098 11.4 1.8 1.1 1 0 0 1 1 1 0 Peptidase C1-like family GARS_C PF02843.16 ORF59691 - 0.1 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, C domain DUF1067 PF06362.11 ORF59390 - 0.012 16.4 0.0 0.012 16.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1067) AraC_binding_2 PF14525.6 ORF59138 - 0.015 15.0 0.4 0.016 14.9 0.4 1.1 1 0 0 1 1 1 0 AraC-binding-like domain MBT PF02820.18 ORF58893 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat DUF948 PF06103.11 ORF58791 - 0.012 15.8 3.2 0.015 15.5 3.2 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF5052 PF16475.5 ORF58791 - 0.051 13.2 0.8 0.057 13.0 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5052) SSP160 PF06933.11 ORF58791 - 1.4 7.0 14.9 1.6 6.8 14.9 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Dicty_REP PF05086.12 ORF58791 - 1.5 6.7 5.8 1.5 6.7 5.8 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Cas_Csa4 PF09703.10 ORF57704 - 0.012 15.0 0.1 0.012 14.9 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csa4) Adaptin_N PF01602.20 ORF57557 - 6.4e-21 74.5 0.1 6.9e-21 74.4 0.1 1.0 1 0 0 1 1 1 1 Adaptin N terminal region DUF4384 PF14326.6 ORF57557 - 0.13 12.4 0.0 0.25 11.5 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4384) DUF5461 PF17545.2 ORF57523 - 0.011 16.0 0.1 0.013 15.7 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5461) HTH_38 PF13936.6 ORF57523 - 0.032 14.0 0.3 0.047 13.5 0.3 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1757 PF08560.10 ORF57497 - 0.051 13.6 0.0 0.052 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1757) SNARE PF05739.19 ORF57435 - 0.34 11.0 5.2 0.52 10.3 5.2 1.4 1 0 0 1 1 1 0 SNARE domain IQ PF00612.27 ORF57094 - 3.8e-08 32.4 9.6 1.5e-06 27.5 2.0 2.8 3 0 0 3 3 3 2 IQ calmodulin-binding motif Dmrt1 PF12374.8 ORF57080 - 0.16 12.4 2.9 0.2 12.1 2.9 1.2 1 0 0 1 1 1 0 Double-sex mab3 related transcription factor 1 Nrap_D3 PF17404.2 ORF56408 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF56408 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R Prim_Zn_Ribbon PF08273.12 ORF56197 - 0.011 16.0 5.5 0.014 15.7 5.5 1.2 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase RNHCP PF12647.7 ORF56197 - 0.028 14.4 0.6 0.074 13.0 0.0 1.8 1 1 1 2 2 2 0 RNHCP domain TF_Zn_Ribbon PF08271.12 ORF56197 - 0.047 13.2 2.1 0.069 12.7 2.1 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding DJ-1_PfpI PF01965.24 ORF56064 - 8.9e-09 35.4 0.0 1.1e-08 35.0 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family S_2TMBeta PF18153.1 ORF56058 - 0.88 9.3 3.1 1.1 9.1 3.1 1.0 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain XET_C PF06955.12 ORF5572 - 0.084 12.7 0.1 0.1 12.4 0.1 1.3 1 0 0 1 1 1 0 Xyloglucan endo-transglycosylase (XET) C-terminus Nrap_D3 PF17404.2 ORF55698 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF55698 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R Bacillus_HBL PF05791.11 ORF55656 - 0.027 14.3 0.7 0.029 14.2 0.7 1.0 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) BEN PF10523.9 ORF55656 - 0.075 13.3 0.1 0.091 13.0 0.1 1.2 1 0 0 1 1 1 0 BEN domain Hist_deacetyl PF00850.19 ORF54543 - 3.8e-21 75.8 1.3 4.1e-21 75.8 1.3 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Sec20 PF03908.13 ORF53937 - 2.3e-05 24.2 0.8 2.6e-05 24.1 0.8 1.1 1 0 0 1 1 1 1 Sec20 HPIH PF13323.6 ORF53937 - 0.00066 19.6 0.1 0.0009 19.1 0.1 1.2 1 0 0 1 1 1 1 N-terminal domain with HPIH motif FLILHELTA PF10306.9 ORF53937 - 0.021 15.2 0.1 0.028 14.8 0.1 1.2 1 0 0 1 1 1 0 Hypothetical protein FLILHELTA ATPase_2 PF01637.18 ORF53937 - 0.033 14.1 0.5 0.036 14.0 0.5 1.0 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ABC2_membrane_3 PF12698.7 ORF53937 - 0.04 13.0 0.0 0.043 12.9 0.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4200 PF13863.6 ORF53937 - 0.049 14.0 2.4 0.063 13.7 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) Ferlin_C PF16165.5 ORF53937 - 0.05 13.5 0.2 0.057 13.4 0.2 1.1 1 0 0 1 1 1 0 Ferlin C-terminus FeoB_associated PF12669.7 ORF53937 - 0.45 11.0 3.3 0.62 10.5 3.3 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein AC_N PF16214.5 ORF53904 - 0.22 10.6 4.0 0.24 10.5 4.0 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Plasmodium_HRP PF05403.11 ORF53856 - 0.0026 17.6 2.4 0.0029 17.4 2.4 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF53856 - 0.067 13.2 6.6 1.1 9.2 0.7 2.3 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain LAGLIDADG_WhiA PF14527.6 ORF53856 - 4.7 7.4 10.8 10 6.3 1.6 2.2 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain DUF4375 PF14300.6 ORF53856 - 8.7 6.6 8.2 18 5.7 5.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) PPR_2 PF13041.6 ORF53781 - 0.027 14.6 0.0 0.17 12.1 0.0 2.0 1 1 1 2 2 2 0 PPR repeat family Toxin_27 PF08099.11 ORF53541 - 0.16 12.1 1.2 0.21 11.7 0.2 1.7 2 0 0 2 2 2 0 Scorpion calcine family Sacchrp_dh_C PF16653.5 ORF5348 - 0.14 12.2 0.1 0.14 12.2 0.1 1.0 1 0 0 1 1 1 0 Saccharopine dehydrogenase C-terminal domain Wax2_C PF12076.8 ORF53397 - 0.11 12.2 0.0 0.17 11.6 0.0 1.3 1 1 0 1 1 1 0 WAX2 C-terminal domain DUF4572 PF15139.6 ORF53092 - 0.051 13.5 0.0 0.057 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4572) Ezh2_MCSS PF18600.1 ORF53025 - 0.15 11.7 0.1 0.34 10.6 0.0 1.6 2 0 0 2 2 2 0 MCSS domain DUF1011 PF06237.12 ORF52742 - 0.0066 16.7 1.7 0.0079 16.5 1.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1011) CAP-ZIP_m PF15255.6 ORF52567 - 0.026 14.8 0.2 0.027 14.7 0.2 1.2 1 0 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region MORN PF02493.20 ORF52082 - 1.7e-08 33.8 12.9 1.5e-06 27.8 1.0 2.8 3 1 0 3 3 3 2 MORN repeat RNA_POL_M_15KD PF02150.16 ORF51366 - 0.076 12.9 2.6 0.13 12.2 0.2 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit TF_Zn_Ribbon PF08271.12 ORF51366 - 0.66 9.5 7.1 6.6 6.3 7.1 2.7 1 1 0 1 1 1 0 TFIIB zinc-binding Curto_V3 PF07436.11 ORF51354 - 0.073 13.5 1.4 0.08 13.3 1.4 1.1 1 0 0 1 1 1 0 Curtovirus V3 protein Glutaredoxin PF00462.24 ORF51102 - 0.0061 16.8 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin TRAP-delta PF05404.12 ORF50633 - 0.23 11.0 0.7 2 7.9 0.0 1.9 1 1 1 2 2 2 0 Translocon-associated protein, delta subunit precursor (TRAP-delta) Porin_2 PF02530.14 ORF50406 - 0.098 11.9 0.1 0.099 11.9 0.1 1.0 1 0 0 1 1 1 0 Porin subfamily DUF3263 PF11662.8 ORF50406 - 0.17 11.8 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3263) RNA_pol_N PF01194.17 ORF50300 - 5e-29 100.4 1.2 5.8e-29 100.2 1.2 1.1 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.12 ORF50300 - 0.02 15.1 1.0 0.082 13.2 1.0 1.8 1 1 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) NIF PF03031.18 ORF50036 - 7e-15 55.1 0.2 8e-15 54.9 0.2 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF705 PF05152.12 ORF50036 - 0.0036 16.8 0.0 0.0041 16.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF705) Sigma_reg_N PF13800.6 ORF50027 - 1.1 9.6 6.8 1.3 9.4 5.9 1.6 1 1 1 2 2 2 0 Sigma factor regulator N-terminal DUF1472 PF07339.12 ORF49814 - 0.16 12.5 2.6 2.8 8.5 0.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1472) Nrap_D3 PF17404.2 ORF4962 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF4962 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R Pkinase PF00069.25 ORF49085 - 5.7e-22 78.3 0.6 5.9e-22 78.3 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49085 - 1e-14 54.5 0.2 1.1e-14 54.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF49085 - 0.00021 20.7 0.0 0.00021 20.7 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF49085 - 0.0052 15.6 0.1 0.0057 15.5 0.1 1.0 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF49085 - 0.026 14.2 0.0 0.029 14.0 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF49085 - 0.032 13.6 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 Kinase-like YrbL-PhoP_reg PF10707.9 ORF49085 - 0.064 12.8 0.0 0.068 12.7 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL HscB_4_cys PF18256.1 ORF49027 - 0.07 13.0 0.7 0.12 12.2 0.7 1.5 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif LPAM_1 PF08139.12 ORF48995 - 0.0025 18.2 1.6 0.0025 18.2 1.6 2.3 2 0 0 2 2 2 1 Prokaryotic membrane lipoprotein lipid attachment site FlaE PF07559.14 ORF48995 - 0.11 13.0 0.0 0.13 12.9 0.0 1.0 1 0 0 1 1 1 0 Flagellar basal body protein FlaE Sugar_tr PF00083.24 ORF48895 - 0.2 10.4 1.2 0.24 10.2 1.2 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter Plasmodium_HRP PF05403.11 ORF48636 - 0.0026 17.6 2.4 0.0029 17.4 2.4 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF48636 - 0.067 13.2 6.6 1.1 9.2 0.7 2.3 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain LAGLIDADG_WhiA PF14527.6 ORF48636 - 4.7 7.4 10.8 10 6.3 1.6 2.2 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain DUF4375 PF14300.6 ORF48636 - 8.7 6.6 8.2 18 5.7 5.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) DUF1761 PF08570.10 ORF47765 - 0.016 15.4 0.3 0.018 15.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1761) Oxysterol_BP PF01237.18 ORF46961 - 0.078 11.8 0.0 0.09 11.6 0.0 1.1 1 0 0 1 1 1 0 Oxysterol-binding protein PARP_regulatory PF01358.18 ORF46961 - 0.083 11.8 1.5 0.099 11.6 1.5 1.0 1 0 0 1 1 1 0 Poly A polymerase regulatory subunit DUF3918 PF13056.6 ORF46534 - 0.19 11.3 0.1 0.19 11.3 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) pP_pnuc_1 PF18165.1 ORF46382 - 0.023 14.6 0.6 0.025 14.5 0.6 1.1 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease DUF1664 PF07889.12 ORF46382 - 0.1 12.6 4.3 0.12 12.4 4.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) cwf21 PF08312.12 ORF46382 - 0.12 12.5 3.4 0.22 11.7 3.4 1.5 1 1 0 1 1 1 0 cwf21 domain YabA PF06156.13 ORF46382 - 0.32 11.7 6.0 0.34 11.6 6.0 1.1 1 0 0 1 1 1 0 Initiation control protein YabA ISG65-75 PF11727.8 ORF46382 - 0.42 9.8 6.5 0.47 9.6 6.5 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein DUF3573 PF12097.8 ORF46382 - 0.47 9.2 2.2 0.49 9.2 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DUF2781 PF10914.8 ORF46221 - 0.041 14.3 0.5 0.042 14.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) Lge1 PF11488.8 ORF45892 - 0.0066 16.6 1.8 0.0083 16.3 1.8 1.2 1 1 0 1 1 1 1 Transcriptional regulatory protein LGE1 Gcd10p PF04189.13 ORF45892 - 0.029 13.5 3.7 0.035 13.2 3.7 1.0 1 0 0 1 1 1 0 Gcd10p family DUF5347 PF17282.2 ORF45892 - 0.036 14.3 0.8 0.04 14.2 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5347) Antimicrobial25 PF16839.5 ORF45710 - 0.23 11.6 6.9 0.29 11.2 6.9 1.2 1 0 0 1 1 1 0 Nematode antimicrobial peptide Asp2 PF16929.5 ORF45642 - 0.14 11.1 0.0 0.14 11.1 0.0 1.0 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter MBT PF02820.18 ORF45574 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat NIF PF03031.18 ORF45555 - 7e-15 55.1 0.2 8e-15 54.9 0.2 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF705 PF05152.12 ORF45555 - 0.0036 16.8 0.0 0.0041 16.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF705) Ras PF00071.22 ORF45332 - 0.018 14.6 0.1 0.022 14.3 0.1 1.1 1 0 0 1 1 1 0 Ras family U-box PF04564.15 ORF44259 - 0.00035 20.7 0.0 0.00042 20.4 0.0 1.1 1 0 0 1 1 1 1 U-box domain Nrap_D3 PF17404.2 ORF43964 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF43964 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R SVM_signal PF12113.8 ORF43820 - 0.19 11.7 0.5 0.19 11.7 0.5 2.4 2 0 0 2 2 2 0 SVM protein signal sequence DUF2076 PF09849.9 ORF42692 - 0.009 16.1 0.0 0.009 16.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) zf-C2HC5 PF06221.13 ORF42452 - 0.098 12.7 0.5 5.6 7.0 0.1 2.1 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type DUF4786 PF16027.5 ORF42379 - 0.049 14.2 0.1 0.05 14.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4786) DUF5320 PF17253.2 ORF41997 - 0.41 11.7 3.3 0.47 11.5 3.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5320) DUF2164 PF09932.9 ORF4135 - 0.035 14.2 0.2 7.1 6.8 0.1 2.3 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2164) RE_Eco47II PF09553.10 ORF4135 - 0.065 12.8 0.0 0.072 12.7 0.0 1.0 1 0 0 1 1 1 0 Eco47II restriction endonuclease DUF4962 PF16332.5 ORF4135 - 0.17 10.3 0.0 0.19 10.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4962) DUF2475 PF10629.9 ORF41318 - 0.0017 18.5 0.0 0.0021 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) LodA_C PF18417.1 ORF41318 - 0.1 12.3 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 L-lysine epsilon oxidase C-terminal domain GNAT_C PF18164.1 ORF40699 - 0.0047 16.6 0.6 0.0055 16.4 0.6 1.0 1 0 0 1 1 1 1 GNAT-like C-terminal domain TMEM247 PF15444.6 ORF40699 - 0.37 10.8 1.0 0.44 10.6 1.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 Antimicrobial25 PF16839.5 ORF39817 - 0.23 11.6 6.9 0.29 11.2 6.9 1.2 1 0 0 1 1 1 0 Nematode antimicrobial peptide MOSC_N PF03476.16 ORF39739 - 4.8e-06 26.5 0.0 5.9e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain Gemini_AL1_M PF08283.11 ORF39220 - 0.039 14.0 2.2 0.044 13.9 2.2 1.0 1 0 0 1 1 1 0 Geminivirus rep protein central domain Luciferase_N PF05295.11 ORF38659 - 0.063 13.3 0.1 0.077 13.0 0.1 1.1 1 0 0 1 1 1 0 Luciferase/LBP N-terminal domain Mdv1 PF11542.8 ORF38659 - 0.08 12.9 0.1 0.14 12.2 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial division protein 1 RepA1_leader PF08048.12 ORF38569 - 2.1 8.7 6.9 4.4e+02 1.3 6.9 2.5 1 1 0 1 1 1 0 Tap RepA1 leader peptide DUF2076 PF09849.9 ORF38280 - 0.009 16.1 0.0 0.009 16.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) IL10 PF00726.17 ORF38148 - 0.05 13.1 0.4 0.058 12.9 0.4 1.1 1 0 0 1 1 1 0 Interleukin 10 Phenol_monoox PF04663.12 ORF37941 - 0.38 10.9 2.7 4.8 7.4 0.3 2.1 1 1 1 2 2 2 0 Phenol hydroxylase conserved region YhdB PF14148.6 ORF37548 - 0.0026 17.8 0.0 0.0038 17.3 0.0 1.3 1 0 0 1 1 1 1 YhdB-like protein SapB_2 PF03489.17 ORF37426 - 0.071 13.2 0.6 0.12 12.6 0.2 1.6 2 0 0 2 2 2 0 Saposin-like type B, region 2 DUF1887 PF09002.11 ORF37416 - 0.017 13.8 0.0 0.02 13.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) Asp2 PF16929.5 ORF37337 - 0.14 11.1 0.0 0.14 11.1 0.0 1.0 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter Imm49 PF15575.6 ORF37230 - 0.14 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 49 DUF3918 PF13056.6 ORF3613 - 0.041 13.5 0.1 0.061 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) DNA_pol_lambd_f PF10391.9 ORF3591 - 0.11 12.3 0.3 0.24 11.2 0.3 1.5 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda MATalpha_HMGbox PF04769.12 ORF35494 - 0.064 12.6 0.0 0.073 12.4 0.0 1.1 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box Med16 PF11635.8 ORF35320 - 0.28 9.1 0.8 0.26 9.1 0.8 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 AMNp_N PF10423.9 ORF35198 - 0.084 12.5 0.0 0.084 12.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial AMP nucleoside phosphorylase N-terminus BAMBI PF06211.12 ORF34890 - 0.12 12.6 0.0 0.14 12.4 0.0 1.0 1 0 0 1 1 1 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain MCR PF18509.1 ORF34565 - 0.042 13.4 0.6 0.065 12.8 0.6 1.3 1 0 0 1 1 1 0 Magnetochrome domain CDC24_OB3 PF17244.2 ORF34565 - 0.07 12.8 0.1 0.072 12.8 0.1 1.0 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 DUF2105 PF09878.9 ORF34553 - 0.0099 15.6 2.4 0.011 15.4 2.4 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2105) DNA_primase_lrg PF04104.14 ORF33688 - 0.22 10.9 1.4 0.24 10.8 1.4 1.1 1 0 0 1 1 1 0 Eukaryotic and archaeal DNA primase, large subunit IGFBP PF00219.18 ORF33136 - 0.16 12.7 4.3 0.46 11.2 4.5 1.7 1 1 0 1 1 1 0 Insulin-like growth factor binding protein FANCL_C PF11793.8 ORF33058 - 0.029 14.5 0.1 0.046 13.9 0.1 1.3 1 0 0 1 1 1 0 FANCL C-terminal domain Ribosomal_L21p PF00829.21 ORF33058 - 0.091 13.0 0.0 0.091 13.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal prokaryotic L21 protein DAO PF01266.24 ORF32403 - 1.4e-05 24.8 0.0 1.5e-05 24.8 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FIST PF08495.10 ORF32403 - 0.084 12.9 0.0 0.092 12.8 0.0 1.1 1 0 0 1 1 1 0 FIST N domain ADD_ATRX PF17981.1 ORF32198 - 0.056 13.3 0.1 0.075 12.9 0.1 1.2 1 0 0 1 1 1 0 Cysteine Rich ADD domain Gly-zipper_YMGG PF13441.6 ORF32102 - 0.045 13.5 35.1 0.047 13.4 23.4 2.1 1 1 1 2 2 2 0 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 ORF32102 - 0.31 11.1 32.4 0.12 12.4 20.6 2.2 1 1 1 2 2 2 0 Glycine zipper Rick_17kDa_Anti PF05433.15 ORF32102 - 1.3 9.0 35.9 3.3 7.7 23.7 2.7 2 1 0 2 2 2 0 Glycine zipper 2TM domain Gly-zipper_OmpA PF13436.6 ORF32102 - 4.7 7.1 35.2 0.85 9.4 25.7 2.8 1 1 1 2 2 2 0 Glycine-zipper domain DUF1590 PF07629.11 ORF31839 - 0.03 14.1 0.1 0.087 12.7 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1590) ADK PF00406.22 ORF31393 - 0.018 15.2 0.4 0.023 14.8 0.3 1.2 1 1 0 1 1 1 0 Adenylate kinase ER PF01133.17 ORF3075 - 2.6e-27 94.7 0.0 2.8e-27 94.6 0.0 1.0 1 0 0 1 1 1 1 Enhancer of rudimentary HTH_6 PF01418.17 ORF30468 - 0.067 13.2 0.0 0.77 9.8 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family DUF3649 PF12365.8 ORF30298 - 0.055 13.2 0.4 0.11 12.3 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3649) DUF3565 PF12088.8 ORF30278 - 0.031 14.2 2.3 0.031 14.2 2.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3565) DUF2733 PF10813.8 ORF29686 - 2 8.3 3.4 15 5.5 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) PMP22_Claudin PF00822.20 ORF29559 - 0.0068 16.3 0.0 0.0079 16.1 0.0 1.1 1 0 0 1 1 1 1 PMP-22/EMP/MP20/Claudin family MFS_3 PF05977.13 ORF29559 - 0.014 13.8 0.1 0.015 13.7 0.1 1.0 1 0 0 1 1 1 0 Transmembrane secretion effector CSN8_PSD8_EIF3K PF10075.9 ORF29500 - 0.00028 20.9 0.0 0.00033 20.7 0.0 1.0 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family SAC3_GANP PF03399.16 ORF29500 - 0.00075 19.0 0.0 0.00082 18.8 0.0 1.0 1 0 0 1 1 1 1 SAC3/GANP family OGG_N PF07934.12 ORF29334 - 4.1e-08 33.3 0.0 4.4e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain Nrap_D3 PF17404.2 ORF29072 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF29072 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R Plasmodium_HRP PF05403.11 ORF28969 - 0.0026 17.6 2.4 0.0029 17.4 2.4 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF28969 - 0.067 13.2 6.6 1.1 9.2 0.7 2.3 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain LAGLIDADG_WhiA PF14527.6 ORF28969 - 4.7 7.4 10.8 10 6.3 1.6 2.2 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain DUF4375 PF14300.6 ORF28969 - 8.7 6.6 8.2 18 5.7 5.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) PdaC PF13739.6 ORF28695 - 0.22 12.5 3.1 0.31 12.0 3.1 1.3 1 0 0 1 1 1 0 Deacetylase PdaC MORN PF02493.20 ORF28503 - 3.6e-17 61.1 20.2 2.4e-07 30.2 2.5 3.9 4 0 0 4 4 4 3 MORN repeat EB_dh PF09459.10 ORF28503 - 0.17 11.9 4.8 0.19 11.7 4.8 1.0 1 0 0 1 1 1 0 Ethylbenzene dehydrogenase PLDc_N PF13396.6 ORF28101 - 0.077 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Phospholipase_D-nuclease N-terminal InvH PF04741.12 ORF28101 - 0.095 12.6 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 InvH outer membrane lipoprotein DUF5003 PF16394.5 ORF27771 - 0.15 11.1 0.1 0.17 11.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5003) SCF PF02404.15 ORF27718 - 0.076 12.3 0.3 0.074 12.4 0.3 1.0 1 0 0 1 1 1 0 Stem cell factor DUF4812 PF16071.5 ORF27028 - 0.074 12.9 0.1 0.087 12.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4812) MiaE_2 PF13794.6 ORF26485 - 0.017 14.9 0.0 0.019 14.7 0.0 1.1 1 0 0 1 1 1 0 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like Endonuc-HincII PF09226.11 ORF26485 - 0.065 12.5 0.3 0.09 12.1 0.2 1.3 1 1 0 1 1 1 0 Restriction endonuclease HincII Spike_torovirin PF17072.5 ORF2634 - 0.14 9.3 0.0 0.14 9.3 0.0 1.0 1 0 0 1 1 1 0 Torovirinae spike glycoprotein Clavanin PF05452.11 ORF26106 - 0.11 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Clavanin ATP-synt_DE PF00401.20 ORF25841 - 2.1e-06 27.9 7.0 2.7e-06 27.5 7.0 1.1 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HU-CCDC81_bac_2 PF18175.1 ORF25841 - 0.3 11.0 1.4 0.91 9.4 0.3 1.9 1 1 1 2 2 2 0 CCDC81-like prokaryotic HU domain 2 DGOK PF05035.12 ORF25705 - 0.016 14.1 0.0 0.017 14.1 0.0 1.1 1 0 0 1 1 1 0 2-keto-3-deoxy-galactonokinase DUF1887 PF09002.11 ORF25162 - 0.017 13.8 0.0 0.02 13.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) AidB_N PF18158.1 ORF25100 - 0.047 13.6 0.1 0.054 13.4 0.1 1.1 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain Pkinase PF00069.25 ORF24940 - 1.4e-08 34.5 0.0 1.4e-08 34.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24940 - 0.0017 17.7 0.0 0.0018 17.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1430 PF07242.11 ORF24679 - 0.049 13.9 13.8 0.056 13.7 13.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) DUF5084 PF16894.5 ORF24679 - 0.056 13.9 7.0 0.045 14.2 6.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5084) TspO_MBR PF03073.15 ORF24679 - 0.54 10.3 7.3 0.57 10.2 7.3 1.0 1 0 0 1 1 1 0 TspO/MBR family YbhQ PF11076.8 ORF24495 - 0.049 13.6 1.2 0.051 13.6 1.2 1.0 1 0 0 1 1 1 0 Putative inner membrane protein YbhQ Bacillus_HBL PF05791.11 ORF24345 - 0.027 14.3 0.7 0.029 14.2 0.7 1.0 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) BEN PF10523.9 ORF24345 - 0.075 13.3 0.1 0.091 13.0 0.1 1.2 1 0 0 1 1 1 0 BEN domain DUF4668 PF15701.5 ORF24266 - 0.032 14.1 0.1 0.035 14.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) MFS_1_like PF12832.7 ORF24266 - 0.039 12.8 0.1 0.039 12.8 0.1 1.2 1 0 0 1 1 1 0 MFS_1 like family Rep_1 PF01446.17 ORF23245 - 0.089 12.2 2.2 0.089 12.3 2.2 1.1 1 0 0 1 1 1 0 Replication protein DUF1910 PF08928.10 ORF23097 - 0.52 10.3 6.3 0.6 10.1 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1910) FixP_N PF14715.6 ORF22881 - 0.13 12.1 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Nrap_D3 PF17404.2 ORF22857 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF22857 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R TagF_N PF09867.9 ORF22677 - 0.067 13.2 0.0 0.1 12.6 0.0 1.2 1 1 0 1 1 1 0 TagF N-terminal domain, Type VI secretion system-associated PAP2 PF01569.21 ORF22229 - 0.16 11.7 6.8 0.14 11.9 3.3 1.9 1 1 1 2 2 2 0 PAP2 superfamily UQ_con PF00179.26 ORF22201 - 3.4e-11 42.9 0.1 3.7e-11 42.8 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF22201 - 0.028 14.1 0.2 0.034 13.9 0.2 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family B zf-C3HC4 PF00097.25 ORF21607 - 0.0011 18.8 3.1 0.0018 18.1 3.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) ArfGap PF01412.18 ORF21607 - 0.018 15.1 1.0 0.018 15.1 1.0 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf zf-RING_2 PF13639.6 ORF21607 - 0.053 13.9 2.9 0.083 13.2 2.9 1.3 1 0 0 1 1 1 0 Ring finger domain zf-C3HC4_4 PF15227.6 ORF21607 - 2.1 8.6 7.3 5.2 7.3 5.2 2.3 2 1 1 3 3 3 0 zinc finger of C3HC4-type, RING PRRSV_Env PF02340.15 ORF21548 - 0.0047 16.3 0.1 0.0053 16.2 0.1 1.1 1 0 0 1 1 1 1 PRRSV putative envelope protein 3D PF06725.11 ORF21461 - 0.0023 18.1 0.0 0.0027 17.9 0.0 1.2 1 0 0 1 1 1 1 3D domain PAPS_reduct PF01507.19 ORF21327 - 9.8e-06 25.7 0.0 1e-05 25.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family AC_N PF16214.5 ORF21132 - 0.22 10.6 4.0 0.24 10.5 4.0 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Clavanin PF05452.11 ORF21118 - 0.11 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Clavanin PTN13_u3 PF16599.5 ORF20748 - 0.0002 21.5 1.7 0.00023 21.3 1.7 1.0 1 0 0 1 1 1 1 Unstructured linker region on PTN13 protein between PDZ FA_desaturase PF00487.24 ORF20555 - 1.6 8.5 17.0 1.7 8.4 17.0 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2207 PF09972.9 ORF20555 - 3.3 6.4 14.0 3.3 6.4 14.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3704 PF12488.8 ORF2016 - 0.086 12.5 3.9 0.15 11.7 3.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3704) Nrap_D3 PF17404.2 ORF1973 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF1973 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R MORN PF02493.20 ORF19470 - 9.5e-16 56.7 16.4 2e-05 24.2 0.6 4.0 4 0 0 4 4 4 4 MORN repeat Phytochelatin_C PF09328.10 ORF19448 - 0.094 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) Phe_ZIP PF08916.11 ORF19425 - 0.053 14.2 4.1 0.39 11.5 0.2 2.0 1 1 1 2 2 2 0 Phenylalanine zipper NdhL PF10716.9 ORF1900 - 0.1 12.6 1.3 0.62 10.1 0.1 2.3 1 1 2 3 3 3 0 NADH dehydrogenase transmembrane subunit BTB PF00651.31 ORF18860 - 3.1e-12 46.7 0.0 3.5e-12 46.5 0.0 1.1 1 0 0 1 1 1 1 BTB/POZ domain DisA_N PF02457.16 ORF18860 - 0.042 13.4 0.0 0.049 13.2 0.0 1.1 1 0 0 1 1 1 0 DisA bacterial checkpoint controller nucleotide-binding MYT1 PF08474.11 ORF18638 - 0.056 13.4 0.1 0.059 13.3 0.1 1.0 1 0 0 1 1 1 0 Myelin transcription factor 1 TRAP_beta PF05753.14 ORF18424 - 0.19 11.1 0.0 0.21 10.9 0.0 1.0 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) BAG6 PF12057.8 ORF18127 - 0.16 11.6 0.6 0.21 11.3 0.6 1.3 1 1 0 1 1 1 0 BCL2-associated athanogene 6 Atypical_Card PF18461.1 ORF1787 - 0.1 12.8 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Atypical caspase recruitment domain UvrD_C_2 PF13538.6 ORF17680 - 3.3e-15 55.6 0.2 5.4e-15 55.0 0.2 1.4 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 ORF17680 - 2.7e-06 27.3 0.2 3.2e-06 27.1 0.2 1.1 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase UvrD_C PF13361.6 ORF17680 - 0.00029 20.3 0.2 0.00043 19.8 0.2 1.3 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain CLLAC PF15675.5 ORF16705 - 0.16 11.6 0.2 0.23 11.1 0.2 1.2 1 0 0 1 1 1 0 CLLAC-motif containing domain RBR PF17208.3 ORF16517 - 0.07 13.9 0.8 0.086 13.6 0.8 1.2 1 0 0 1 1 1 0 RNA binding Region DUF4917 PF16263.5 ORF16347 - 0.079 12.3 0.4 0.078 12.3 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4917) DUF1887 PF09002.11 ORF16153 - 0.017 13.8 0.0 0.02 13.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) PAP2 PF01569.21 ORF1511 - 1 9.1 8.0 1.1 9.0 8.0 1.0 1 0 0 1 1 1 0 PAP2 superfamily Nrap_D3 PF17404.2 ORF14908 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF14908 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R MarC PF01914.17 ORF14814 - 8.9e-21 74.2 3.7 9.5e-21 74.1 3.7 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein Keratin_assoc PF09775.9 ORF14781 - 0.012 15.3 5.1 0.014 15.0 5.1 1.0 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 Plasmodium_HRP PF05403.11 ORF14277 - 0.0026 17.6 2.4 0.0029 17.4 2.4 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF14277 - 0.067 13.2 6.6 1.1 9.2 0.7 2.3 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain LAGLIDADG_WhiA PF14527.6 ORF14277 - 4.7 7.4 10.8 10 6.3 1.6 2.2 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain DUF4375 PF14300.6 ORF14277 - 8.7 6.6 8.2 18 5.7 5.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) Curto_V3 PF07436.11 ORF13740 - 0.073 13.5 1.4 0.08 13.3 1.4 1.1 1 0 0 1 1 1 0 Curtovirus V3 protein DUF2780 PF11075.8 ORF13674 - 0.046 13.9 0.1 0.049 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function VcgC/VcgE (DUF2780) Asp PF00026.23 ORF13206 - 7.6e-07 28.8 0.0 8.5e-07 28.7 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF1336 PF07059.12 ORF13066 - 2.5e-06 27.7 0.0 3.1e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1336) MYT1 PF08474.11 ORF12547 - 0.056 13.4 0.1 0.059 13.3 0.1 1.0 1 0 0 1 1 1 0 Myelin transcription factor 1 DUF4081 PF13312.6 ORF11780 - 0.056 13.6 0.0 0.061 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4081) Vps4_C PF09336.10 ORF11633 - 0.074 13.1 0.1 0.16 12.0 0.0 1.5 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain zf-RRN7 PF11781.8 ORF11521 - 0.072 12.8 0.1 0.28 10.9 0.0 1.9 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 PCP_red PF08369.10 ORF112563 - 0.094 12.9 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Proto-chlorophyllide reductase 57 kD subunit LRR_6 PF13516.6 ORF112503 - 0.059 13.5 0.1 5.4 7.3 0.0 2.2 2 0 0 2 2 2 0 Leucine Rich repeat MBT PF02820.18 ORF112136 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat zf-C3HC4 PF00097.25 ORF112025 - 0.0011 18.8 3.1 0.0018 18.1 3.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) ArfGap PF01412.18 ORF112025 - 0.018 15.1 1.0 0.018 15.1 1.0 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf zf-RING_2 PF13639.6 ORF112025 - 0.053 13.9 2.9 0.083 13.2 2.9 1.3 1 0 0 1 1 1 0 Ring finger domain zf-C3HC4_4 PF15227.6 ORF112025 - 2.1 8.6 7.3 5.2 7.3 5.2 2.3 2 1 1 3 3 3 0 zinc finger of C3HC4-type, RING Caa3_CtaG PF09678.10 ORF111717 - 0.0063 16.0 0.3 0.0066 15.9 0.3 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DUF1590 PF07629.11 ORF111395 - 0.03 14.1 0.1 0.087 12.7 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1590) DUF5589 PF17672.1 ORF111279 - 0.32 10.9 6.1 0.11 12.4 4.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5589) TRAM PF01938.20 ORF111240 - 0.0016 18.4 0.1 0.0018 18.2 0.1 1.1 1 0 0 1 1 1 1 TRAM domain DUF2076 PF09849.9 ORF109806 - 0.009 16.1 0.0 0.009 16.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) HEM4 PF02602.15 ORF109582 - 2.6e-07 30.2 0.0 3.1e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Cm_res_leader PF08077.11 ORF109266 - 0.11 12.7 0.0 0.21 11.7 0.0 1.6 1 0 0 1 1 1 0 Chloramphenicol resistance gene leader peptide DUF4081 PF13312.6 ORF109235 - 0.056 13.6 0.0 0.061 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4081) Mre11_DNA_bind PF04152.14 ORF1091 - 0.04 14.3 0.4 0.043 14.2 0.4 1.1 1 0 0 1 1 1 0 Mre11 DNA-binding presumed domain PL48 PF15903.5 ORF108761 - 0.039 12.9 0.4 0.044 12.8 0.4 1.0 1 0 0 1 1 1 0 Filopodia upregulated, FAM65 UL16 PF17622.2 ORF108524 - 0.04 13.6 0.0 0.042 13.5 0.0 1.0 1 0 0 1 1 1 0 Viral unique long protein 16 MBT PF02820.18 ORF108489 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat ABC_membrane PF00664.23 ORF108443 - 0.00023 20.9 0.1 0.00027 20.7 0.1 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF5347 PF17282.2 ORF108336 - 0.014 15.7 0.0 0.015 15.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5347) FGFR3_TM PF18123.1 ORF108336 - 0.08 12.5 0.1 0.15 11.6 0.1 1.5 1 0 0 1 1 1 0 Fibroblast growth factor receptor 3 transmembrane domain TAF1D PF15333.6 ORF107858 - 0.0084 15.9 0.0 0.0089 15.8 0.0 1.0 1 0 0 1 1 1 1 TATA box-binding protein-associated factor 1D NRDE-2 PF08424.10 ORF107858 - 0.014 14.5 0.1 0.015 14.5 0.1 1.0 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference DNA_RNApol_7kD PF03604.13 ORF107483 - 0.057 13.1 1.4 0.095 12.4 0.1 2.0 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit LRR_2 PF07723.13 ORF106332 - 0.074 13.8 2.7 2.6 8.9 0.6 2.4 2 0 0 2 2 2 0 Leucine Rich Repeat SNARE PF05739.19 ORF105849 - 0.34 11.0 5.2 0.52 10.3 5.2 1.4 1 0 0 1 1 1 0 SNARE domain Plasmodium_HRP PF05403.11 ORF10546 - 0.0026 17.6 2.4 0.0029 17.4 2.4 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF10546 - 0.067 13.2 6.6 1.1 9.2 0.7 2.3 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain LAGLIDADG_WhiA PF14527.6 ORF10546 - 4.7 7.4 10.8 10 6.3 1.6 2.2 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain DUF4375 PF14300.6 ORF10546 - 8.7 6.6 8.2 18 5.7 5.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) DDR PF08841.10 ORF105402 - 0.1 11.6 0.0 0.1 11.6 0.0 1.0 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain Mito_morph_reg PF14972.6 ORF104954 - 0.34 10.5 1.2 0.36 10.4 1.1 1.3 1 1 0 1 1 1 0 Mitochondrial morphogenesis regulator BCHF PF07284.11 ORF104718 - 0.38 10.8 4.9 0.79 9.7 4.9 1.5 1 1 0 1 1 1 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) Nrap_D3 PF17404.2 ORF104647 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF104647 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R DnaJ PF00226.31 ORF104550 - 0.023 14.8 0.2 0.048 13.8 0.2 1.5 1 0 0 1 1 1 0 DnaJ domain IL8 PF00048.20 ORF103185 - 0.051 13.7 0.1 0.074 13.2 0.1 1.2 1 0 0 1 1 1 0 Small cytokines (intecrine/chemokine), interleukin-8 like zf-C2H2_11 PF16622.5 ORF102658 - 0.045 13.5 0.4 0.095 12.5 0.4 1.5 1 0 0 1 1 1 0 zinc-finger C2H2-type Sde2_N_Ubi PF13019.6 ORF102202 - 0.26 11.1 0.0 0.27 11.0 0.0 1.0 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain DUF4559 PF15112.6 ORF102029 - 0.09 12.4 0.0 0.1 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Retrotran_gag_3 PF14244.6 ORF101078 - 0.18 11.7 0.1 0.31 10.9 0.1 1.4 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type DUF1011 PF06237.12 ORF100621 - 0.0066 16.7 1.7 0.0079 16.5 1.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1011) Zn_Tnp_IS1 PF03811.13 ORF100541 - 0.052 13.3 1.0 0.084 12.6 1.0 1.5 1 1 0 1 1 1 0 InsA N-terminal domain SPX PF03105.19 ORF100172 - 0.0024 17.9 0.1 0.0029 17.6 0.1 1.1 1 0 0 1 1 1 1 SPX domain DUF3343 PF11823.8 NODE_73778_length_214_cov_0.888268_g65837_i0reverse_frame_1 - 0.038 13.5 0.0 0.056 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) SMC_N PF02463.19 NODE_73770_length_214_cov_0.893855_g65829_i0forward_frame_1 - 0.0079 15.7 0.1 0.0085 15.6 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_13 PF13166.6 NODE_73770_length_214_cov_0.893855_g65829_i0forward_frame_1 - 0.038 12.6 0.0 0.038 12.6 0.0 1.0 1 0 0 1 1 1 0 AAA domain UCH PF00443.29 NODE_73768_length_214_cov_0.893855_g65827_i0reverse_frame_1 - 0.01 15.3 0.2 0.01 15.3 0.2 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase DUF3987 PF13148.6 NODE_73744_length_214_cov_1.033520_g65803_i0forward_frame_1 - 0.019 14.0 0.0 0.022 13.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Microvir_lysis PF04517.12 NODE_73743_length_214_cov_1.039106_g65802_i0forward_frame_1 - 0.04 13.9 0.4 0.11 12.4 0.1 1.8 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus AAA_lid_5 PF17865.1 NODE_73735_length_214_cov_1.111732_g65794_i0reverse_frame_1 - 0.16 12.1 1.0 0.28 11.3 1.0 1.5 1 1 0 1 1 1 0 Midasin AAA lid domain DUF4215 PF13948.6 NODE_73721_length_214_cov_1.268156_g65780_i0reverse_frame_1 - 2.8e-07 30.8 15.5 8.9e-05 22.8 6.7 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4215) ZZ PF00569.17 NODE_73721_length_214_cov_1.268156_g65780_i0reverse_frame_1 - 0.012 15.4 3.6 0.019 14.8 0.3 2.1 2 0 0 2 2 2 0 Zinc finger, ZZ type DUF5090 PF17009.5 NODE_73718_length_214_cov_1.284916_g65777_i0forward_frame_1 - 0.018 15.0 0.5 0.021 14.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF3481 PF11980.8 NODE_73718_length_214_cov_1.284916_g65777_i0forward_frame_1 - 0.94 9.2 3.3 10 5.9 0.1 2.1 1 1 1 2 2 2 0 C-terminal domain of neuropilin glycoprotein SH PF01445.17 NODE_73716_length_214_cov_1.290503_g65775_i0forward_frame_1 - 1.8 8.6 10.3 5.8 7.0 0.5 2.2 1 1 0 2 2 2 0 Viral small hydrophobic protein Atrophin-1 PF03154.15 NODE_73715_length_214_cov_1.296089_g65774_i0reverse_frame_1 - 0.059 11.7 6.8 0.06 11.6 6.8 1.0 1 0 0 1 1 1 0 Atrophin-1 family Pex14_N PF04695.13 NODE_73708_length_214_cov_1.335196_g65767_i0reverse_frame_1 - 3.4 8.3 15.8 4.2 8.0 15.8 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3613 PF12266.8 NODE_73708_length_214_cov_1.335196_g65767_i0reverse_frame_1 - 3.7 7.4 15.0 1.6 8.5 8.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3613) KCNQ2_u3 PF16642.5 NODE_73708_length_214_cov_1.335196_g65767_i0reverse_frame_1 - 9.5 7.3 11.7 12 6.9 11.7 1.2 1 0 0 1 1 1 0 Unstructured region on Potassium channel subunit alpha KvLQT2 DNA_pol_A_exoN PF18305.1 NODE_73707_length_214_cov_1.335196_g65766_i0forward_frame_1 - 0.14 12.4 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 3' to 5' exonuclease C-terminal domain Gamma-thionin PF00304.20 NODE_73703_length_214_cov_1.340782_g65762_i0forward_frame_1 - 0.17 12.2 5.1 0.31 11.3 3.9 2.0 2 1 0 2 2 2 0 Gamma-thionin family DUF2353 PF09789.9 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.0015 18.0 0.4 0.0015 18.0 0.4 1.0 1 0 0 1 1 1 1 Uncharacterized coiled-coil protein (DUF2353) FliD_N PF02465.18 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.0091 16.7 1.1 0.0098 16.6 1.1 1.1 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus Bap31_Bap29_C PF18035.1 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.014 15.4 2.0 0.015 15.2 2.0 1.1 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain Alpha-2-MRAP_C PF06401.11 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.017 15.1 1.1 0.018 15.0 1.1 1.1 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain PI3K_P85_iSH2 PF16454.5 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.019 14.6 4.8 0.022 14.3 4.8 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF3584 PF12128.8 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.034 11.7 0.2 0.034 11.7 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) GrpE PF01025.19 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.036 13.7 0.6 0.036 13.7 0.6 1.1 1 0 0 1 1 1 0 GrpE Pex14_N PF04695.13 NODE_73684_length_214_cov_1.452514_g65743_i0reverse_frame_1 - 0.69 10.6 6.6 0.76 10.4 6.6 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region SPW PF03779.14 NODE_73684_length_214_cov_1.452514_g65743_i0forward_frame_1 - 0.016 14.8 0.1 0.026 14.1 0.1 1.2 1 0 0 1 1 1 0 SPW repeat Bunya_G2 PF03563.13 NODE_73683_length_214_cov_1.452514_g65742_i0reverse_frame_1 - 0.15 11.3 4.4 0.16 11.2 4.4 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 STAR_dimer PF16544.5 NODE_73683_length_214_cov_1.452514_g65742_i0forward_frame_1 - 0.13 11.9 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Homodimerisation region of STAR domain protein SPT_ssu-like PF11779.8 NODE_73680_length_214_cov_1.469274_g65739_i0reverse_frame_1 - 0.11 12.2 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like DUF5560 PF17715.1 NODE_73649_length_214_cov_1.709497_g65708_i0reverse_frame_1 - 0.033 13.6 2.1 0.031 13.7 2.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) DUF2282 PF10048.9 NODE_73648_length_214_cov_1.709497_g65707_i0reverse_frame_1 - 0.33 11.0 3.4 1.6 8.8 0.0 2.1 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2282) DUF4883 PF16224.5 NODE_73647_length_214_cov_1.720670_g65706_i0reverse_frame_1 - 0.017 15.4 2.3 0.018 15.3 2.3 1.0 1 0 0 1 1 1 0 DOmain of unknown function (DUF4883) TMEM234 PF10639.9 NODE_73646_length_214_cov_1.720670_g65705_i0reverse_frame_1 - 0.044 13.8 1.0 0.047 13.7 1.0 1.0 1 0 0 1 1 1 0 Putative transmembrane family 234 UPF0542 PF15086.6 NODE_73642_length_214_cov_1.759777_g65701_i0forward_frame_1 - 1.6 8.7 6.8 0.23 11.4 2.6 1.7 1 1 1 2 2 2 0 Uncharacterised protein family UPF0542 Hfx_Cass5 PF18287.1 NODE_73641_length_214_cov_1.776536_g65700_i0reverse_frame_1 - 0.1 12.8 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Integron Cassette Protein Hfx_Cass5 DUF3974 PF13120.6 NODE_73626_length_214_cov_1.899441_g65685_i0forward_frame_1 - 0.13 12.3 0.2 0.15 12.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks337.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks337.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks337.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks337.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:21:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1748 PF08520.10 NODE_73611_length_214_cov_2.134078_g65670_i0forward_frame_1 - 0.073 13.0 0.6 2.8 7.9 0.0 2.1 1 1 1 2 2 2 0 Fungal protein of unknown function (DUF1748) Antimicrobial_6 PF08036.11 NODE_73608_length_214_cov_2.167598_g65667_i0reverse_frame_1 - 0.95 9.6 4.3 1.3 9.1 4.3 1.2 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide ORF6C PF10552.9 NODE_73603_length_214_cov_2.273743_g65662_i0forward_frame_1 - 0.054 13.6 0.2 0.061 13.4 0.2 1.2 1 0 0 1 1 1 0 ORF6C domain DUF308 PF03729.13 NODE_73596_length_214_cov_2.446927_g65655_i0forward_frame_1 - 0.00016 22.0 2.0 0.00023 21.4 2.0 1.3 1 1 0 1 1 1 1 Short repeat of unknown function (DUF308) Peptidase_S31 PF05578.12 NODE_73596_length_214_cov_2.446927_g65655_i0forward_frame_1 - 0.015 14.8 0.0 0.017 14.6 0.0 1.0 1 0 0 1 1 1 0 Pestivirus NS3 polyprotein peptidase S31 Acyl_transf_3 PF01757.22 NODE_73596_length_214_cov_2.446927_g65655_i0forward_frame_1 - 0.074 12.1 4.3 0.08 12.0 4.3 1.0 1 0 0 1 1 1 0 Acyltransferase family Sugar_tr PF00083.24 NODE_73594_length_214_cov_2.519553_g65653_i0reverse_frame_1 - 0.0054 15.6 0.0 0.0054 15.6 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter SCFA_trans PF02667.14 NODE_73590_length_214_cov_2.625698_g65649_i0forward_frame_1 - 0.023 13.7 0.3 0.026 13.5 0.3 1.0 1 0 0 1 1 1 0 Short chain fatty acid transporter UPF0259 PF06790.11 NODE_73588_length_214_cov_2.636872_g65647_i0forward_frame_1 - 3.7e-29 102.2 9.8 4e-29 102.1 9.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0259) PG_isomerase_N PF18353.1 NODE_73559_length_214_cov_15.497207_g65618_i0reverse_frame_1 - 0.11 12.9 0.0 0.13 12.7 0.0 1.3 1 1 0 1 1 1 0 Phosphoglucose isomerase N-terminal domain PGM1_C PF18105.1 NODE_73557_length_214_cov_21.709497_g65616_i0reverse_frame_1 - 0.11 12.0 0.2 0.15 11.6 0.2 1.2 1 0 0 1 1 1 0 PGM1 C-terminal domain SHIPPO-rpt PF07004.12 NODE_73550_length_214_cov_35.553073_g65609_i0reverse_frame_1 - 0.00032 21.5 0.1 0.011 16.6 0.1 2.2 2 0 0 2 2 2 1 Sperm-tail PG-rich repeat DIRP PF06584.13 NODE_73549_length_214_cov_36.430168_g65608_i0forward_frame_1 - 0.016 15.4 1.4 0.018 15.2 1.4 1.0 1 0 0 1 1 1 0 DIRP Myb_DNA-bind_3 PF12776.7 NODE_73546_length_214_cov_42.648045_g65605_i0reverse_frame_1 - 0.14 13.1 0.0 0.17 12.9 0.0 1.1 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain CD52 PF15116.6 NODE_73545_length_214_cov_44.368715_g65604_i0forward_frame_1 - 0.89 9.6 6.7 1.9 8.6 6.7 1.6 1 0 0 1 1 1 0 CAMPATH-1 antigen Ribosomal_S13_N PF08069.12 NODE_73544_length_214_cov_45.050279_g65603_i0reverse_frame_1 - 0.13 12.4 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal S13/S15 N-terminal domain C1_2 PF03107.16 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.0055 17.0 6.1 0.0055 17.0 6.1 1.5 1 1 1 2 2 2 1 C1 domain zf-B_box PF00643.24 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.022 14.9 8.4 0.088 13.0 8.4 1.9 1 1 0 1 1 1 0 B-box zinc finger zinc-ribbons_6 PF07191.12 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.1 12.6 5.3 0.4 10.7 5.4 2.1 1 1 0 1 1 1 0 zinc-ribbons HscB_4_cys PF18256.1 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.22 11.3 3.8 0.77 9.6 0.5 2.9 3 1 0 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif YhfH PF14149.6 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.29 11.2 7.7 2 8.5 1.5 2.9 3 1 0 3 3 3 0 YhfH-like protein zf-RING_7 PF02591.15 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.85 9.9 0.0 0.85 9.9 0.0 2.6 2 1 0 2 2 2 0 C4-type zinc ribbon domain RNA_POL_M_15KD PF02150.16 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 1.5 8.8 8.1 18 5.3 0.3 3.0 1 1 2 3 3 3 0 RNA polymerases M/15 Kd subunit TF_Zn_Ribbon PF08271.12 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 1.5 8.4 10.6 0.46 10.0 0.6 2.8 1 1 2 3 3 3 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 1.8 8.8 10.8 7.9 6.7 0.3 3.3 1 1 1 2 2 2 0 Zinc ribbon domain zf-C4_Topoisom PF01396.19 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 3.8 7.4 9.1 4 7.3 0.3 2.8 3 1 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.6 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 3.9 7.0 13.9 3 7.4 0.2 3.7 3 1 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 4.4 7.1 10.3 4.2 7.2 0.1 3.5 4 0 0 4 4 4 0 zinc-ribbon domain GPR15L PF15854.5 NODE_73541_length_214_cov_46.039106_g65600_i0forward_frame_1 - 0.098 12.9 1.0 0.12 12.6 1.0 1.1 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 Neurokinin_B PF03823.14 NODE_73537_length_214_cov_50.575419_g65596_i0reverse_frame_1 - 0.13 12.3 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Neurokinin B LapA_dom PF06305.11 NODE_73524_length_214_cov_66.262570_g65583_i0forward_frame_1 - 0.95 9.3 3.6 0.24 11.2 0.5 1.6 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain SOP4 PF17081.5 NODE_73520_length_214_cov_72.754190_g65579_i0reverse_frame_1 - 0.13 11.8 0.0 0.14 11.7 0.0 1.0 1 0 0 1 1 1 0 Suppressor of PMA 1-7 protein Apocytochr_F_C PF01333.19 NODE_73519_length_214_cov_73.776536_g65578_i0reverse_frame_1 - 0.067 13.2 0.0 0.077 13.0 0.0 1.2 1 0 0 1 1 1 0 Apocytochrome F, C-terminal LPD30 PF18850.1 NODE_73502_length_214_cov_251.625698_g65561_i0reverse_frame_1 - 0.13 12.0 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein associated domain 30 Peptidase_M41 PF01434.18 NODE_73493_length_215_cov_0.861111_g65552_i0forward_frame_1 - 2.8e-09 37.1 0.0 2.8e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M41 VEG PF06257.11 NODE_73485_length_215_cov_0.883333_g65544_i0forward_frame_1 - 0.11 12.6 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 Biofilm formation stimulator VEG DUF5081 PF16887.5 NODE_73484_length_215_cov_0.883333_g65543_i0reverse_frame_1 - 0.017 14.2 0.0 0.018 14.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5081) DUF4881 PF16222.5 NODE_73484_length_215_cov_0.883333_g65543_i0reverse_frame_1 - 0.076 12.8 0.0 0.086 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4881) VasL PF12486.8 NODE_73482_length_215_cov_0.888889_g65541_i0forward_frame_1 - 0.14 12.1 0.7 0.15 11.9 0.7 1.0 1 0 0 1 1 1 0 Type VI secretion system, EvfB, or VasL DUF87 PF01935.17 NODE_73473_length_215_cov_0.888889_g65532_i0reverse_frame_1 - 0.014 15.5 0.2 0.014 15.5 0.2 1.0 1 0 0 1 1 1 0 Helicase HerA, central domain Oxidored-like PF09791.9 NODE_73466_length_215_cov_1.000000_g65525_i0reverse_frame_1 - 0.11 12.2 0.2 0.21 11.3 0.2 1.4 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal CYTL1 PF15153.6 NODE_73458_length_215_cov_1.055556_g65517_i0reverse_frame_1 - 0.079 12.9 0.0 0.085 12.8 0.0 1.0 1 0 0 1 1 1 0 Cytokine-like protein 1 CAF1-p150_N PF15557.6 NODE_73454_length_215_cov_1.072222_g65513_i0reverse_frame_1 - 0.015 15.3 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 CAF1 complex subunit p150, region binding to PCNA MFS_1 PF07690.16 NODE_73453_length_215_cov_1.077778_g65512_i0reverse_frame_1 - 6.4e-05 22.0 0.7 6.8e-05 21.9 0.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_73453_length_215_cov_1.077778_g65512_i0reverse_frame_1 - 0.0015 17.5 0.3 0.0016 17.4 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter BT1 PF03092.16 NODE_73453_length_215_cov_1.077778_g65512_i0reverse_frame_1 - 0.018 13.3 0.4 0.019 13.2 0.4 1.0 1 0 0 1 1 1 0 BT1 family Glycoprotein_G PF00802.19 NODE_73440_length_215_cov_1.138889_g65499_i0forward_frame_1 - 0.071 12.5 0.0 0.085 12.2 0.0 1.0 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Peptidase_C2 PF00648.21 NODE_73432_length_215_cov_1.222222_g65491_i0reverse_frame_1 - 1e-06 28.0 0.0 1e-06 28.0 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Bunya_G2 PF03563.13 NODE_73430_length_215_cov_1.233333_g65489_i0reverse_frame_1 - 0.015 14.6 1.1 0.016 14.5 1.1 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 MPM1 PF17234.2 NODE_73429_length_215_cov_1.250000_g65488_i0reverse_frame_1 - 0.0075 16.5 2.1 0.0083 16.4 2.1 1.1 1 0 0 1 1 1 1 Mitochondrial peculiar membrane protein 1 Sacchrp_dh_NADP PF03435.18 NODE_73427_length_215_cov_1.288889_g65486_i0reverse_frame_1 - 0.00016 22.0 0.0 0.00017 21.9 0.0 1.0 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Megourin PF17560.2 NODE_73419_length_215_cov_1.322222_g65478_i0reverse_frame_1 - 0.025 14.8 0.2 0.043 14.1 0.2 1.4 1 0 0 1 1 1 0 Aphid Megourins LRRNT PF01462.18 NODE_73417_length_215_cov_1.327778_g65476_i0forward_frame_1 - 0.026 14.1 0.2 0.065 12.9 0.0 1.7 2 0 0 2 2 2 0 Leucine rich repeat N-terminal domain Ufd2P_core PF10408.9 NODE_73412_length_215_cov_1.333333_g65471_i0forward_frame_1 - 2.5e-06 26.4 0.2 2.6e-06 26.4 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin elongating factor core P34-Arc PF04045.14 NODE_73408_length_215_cov_1.377778_g65467_i0reverse_frame_1 - 0.07 12.8 0.1 0.077 12.7 0.1 1.0 1 0 0 1 1 1 0 Arp2/3 complex, 34 kD subunit p34-Arc cEGF PF12662.7 NODE_73408_length_215_cov_1.377778_g65467_i0forward_frame_1 - 0.062 13.3 0.4 0.062 13.3 0.4 3.3 3 1 0 3 3 3 0 Complement Clr-like EGF-like DNA_primase_S PF01896.19 NODE_73401_length_215_cov_1.416667_g65460_i0forward_frame_1 - 0.15 12.1 0.0 0.16 12.0 0.0 1.0 1 0 0 1 1 1 0 DNA primase small subunit SpoVS PF04232.12 NODE_73399_length_215_cov_1.433333_g65458_i0reverse_frame_1 - 0.00016 21.3 0.0 0.00021 21.0 0.0 1.1 1 0 0 1 1 1 1 Stage V sporulation protein S (SpoVS) oligo_HPY PF08352.12 NODE_73384_length_215_cov_1.505556_g65443_i0reverse_frame_1 - 0.023 15.2 0.0 0.032 14.8 0.0 1.1 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region DUF5505 PF17610.2 NODE_73377_length_215_cov_1.555556_g65436_i0reverse_frame_1 - 0.057 13.4 0.0 0.064 13.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5505) Sugar_tr PF00083.24 NODE_73369_length_215_cov_1.616667_g65428_i0reverse_frame_1 - 2.2e-07 30.1 0.2 2.5e-07 29.9 0.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_73369_length_215_cov_1.616667_g65428_i0reverse_frame_1 - 0.0014 17.6 0.1 0.0014 17.6 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Pico_P2B PF01552.17 NODE_73368_length_215_cov_1.622222_g65427_i0reverse_frame_1 - 0.027 14.6 1.9 0.032 14.4 1.9 1.1 1 0 0 1 1 1 0 Picornavirus 2B protein DUF1475 PF07343.11 NODE_73364_length_215_cov_1.638889_g65423_i0reverse_frame_1 - 0.029 14.2 0.1 0.03 14.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1475) Sod_Ni PF09055.11 NODE_73360_length_215_cov_1.666667_g65419_i0forward_frame_1 - 0.0069 16.9 0.2 0.0077 16.8 0.2 1.2 1 0 0 1 1 1 1 Nickel-containing superoxide dismutase HTH_26 PF13443.6 NODE_73356_length_215_cov_1.683333_g65415_i0reverse_frame_1 - 0.18 12.3 0.0 0.29 11.6 0.0 1.3 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF5033 PF16436.5 NODE_73343_length_215_cov_1.766667_g65402_i0reverse_frame_1 - 0.057 13.4 0.0 0.065 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5033) B56 PF01603.20 NODE_73338_length_215_cov_1.783333_g65397_i0reverse_frame_1 - 1.5e-24 86.7 0.6 1.6e-24 86.7 0.6 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) CSM2 PF16834.5 NODE_73334_length_215_cov_1.844444_g65393_i0reverse_frame_1 - 0.036 13.7 0.3 0.043 13.5 0.3 1.1 1 0 0 1 1 1 0 Shu complex component Csm2, DNA-binding DUF4791 PF16039.5 NODE_73330_length_215_cov_1.927778_g65389_i0forward_frame_1 - 0.0042 16.6 0.7 0.0045 16.5 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4791) BTB PF00651.31 NODE_73306_length_215_cov_2.216667_g65365_i0forward_frame_1 - 5.7e-09 36.2 0.2 6.3e-09 36.0 0.2 1.0 1 0 0 1 1 1 1 BTB/POZ domain Ycf66_N PF07444.11 NODE_73301_length_215_cov_2.294444_g65360_i0reverse_frame_1 - 0.073 13.2 0.0 0.097 12.8 0.0 1.2 1 0 0 1 1 1 0 Ycf66 protein N-terminus DUF4054 PF13262.6 NODE_73295_length_215_cov_2.444444_g65354_i0forward_frame_1 - 0.063 13.3 0.1 0.069 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4054) PAN_2 PF08276.11 NODE_73291_length_215_cov_2.477778_g65350_i0reverse_frame_1 - 0.0051 16.9 0.4 0.0064 16.6 0.4 1.2 1 0 0 1 1 1 1 PAN-like domain MFS_1 PF07690.16 NODE_73289_length_215_cov_2.511111_g65348_i0forward_frame_1 - 2.7e-05 23.3 0.3 2.7e-05 23.3 0.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Mad3_BUB1_I_2 PF17014.5 NODE_73289_length_215_cov_2.511111_g65348_i0forward_frame_1 - 0.024 14.8 0.0 0.03 14.4 0.0 1.1 1 0 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein DUF2618 PF10940.8 NODE_73280_length_215_cov_2.938889_g65339_i0forward_frame_1 - 0.15 11.9 1.2 1.5 8.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) DUF3719 PF12516.8 NODE_73271_length_215_cov_3.855556_g65330_i0reverse_frame_1 - 0.11 12.2 0.8 0.14 11.9 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) Inhibitor_I29 PF08246.12 NODE_73266_length_215_cov_4.305556_g65325_i0forward_frame_1 - 5.2e-17 62.0 2.5 6.1e-17 61.8 2.5 1.0 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Glu_dehyd_C PF16912.5 NODE_73266_length_215_cov_4.305556_g65325_i0forward_frame_1 - 0.086 12.3 0.0 0.087 12.3 0.0 1.0 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus DUF4586 PF15239.6 NODE_73251_length_215_cov_30.427778_g65310_i0forward_frame_1 - 0.22 11.7 0.0 0.25 11.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4586) HpcH_HpaI PF03328.14 NODE_73250_length_215_cov_31.344444_g65309_i0reverse_frame_1 - 2.4e-05 23.6 0.0 2.9e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family DXP_reductoisom PF02670.16 NODE_73250_length_215_cov_31.344444_g65309_i0reverse_frame_1 - 0.041 14.6 0.0 0.044 14.5 0.0 1.0 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase DHC_N1 PF08385.12 NODE_73247_length_215_cov_38.205556_g65306_i0reverse_frame_1 - 0.02 13.6 0.1 0.023 13.4 0.1 1.0 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 1 PI_PP_C PF18365.1 NODE_73247_length_215_cov_38.205556_g65306_i0reverse_frame_1 - 0.087 12.8 0.2 0.11 12.5 0.2 1.4 1 1 0 1 1 1 0 Phosphoinositide phosphatase C-terminal domain DUF2477 PF10631.9 NODE_73243_length_215_cov_42.944444_g65302_i0reverse_frame_1 - 0.14 12.8 0.0 0.16 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2477) ETRAMP PF09716.10 NODE_73241_length_215_cov_43.516667_g65300_i0forward_frame_1 - 0.025 14.7 0.2 0.028 14.5 0.2 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Colicin_V PF02674.16 NODE_73239_length_215_cov_44.733333_g65298_i0forward_frame_1 - 0.032 14.2 0.3 0.041 13.8 0.3 1.1 1 0 0 1 1 1 0 Colicin V production protein Rad60-SLD PF11976.8 NODE_73237_length_215_cov_46.466667_g65296_i0reverse_frame_1 - 1.2e-08 34.6 0.1 1.8e-08 34.1 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 NODE_73237_length_215_cov_46.466667_g65296_i0reverse_frame_1 - 0.00055 19.6 0.0 0.00075 19.2 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family SRPRB PF09439.10 NODE_73230_length_215_cov_49.844444_g65289_i0reverse_frame_1 - 0.00028 20.4 0.4 0.00032 20.2 0.4 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit 7tm_3 PF00003.22 NODE_73227_length_215_cov_52.294444_g65286_i0reverse_frame_1 - 0.069 12.9 1.5 0.069 12.9 1.5 1.0 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR DUF347 PF03988.12 NODE_73225_length_215_cov_54.511111_g65284_i0forward_frame_1 - 0.015 15.5 0.2 0.023 14.9 0.2 1.2 1 0 0 1 1 1 0 Repeat of Unknown Function (DUF347) CoaE PF01121.20 NODE_73217_length_215_cov_59.016667_g65276_i0reverse_frame_1 - 0.0011 18.7 0.2 0.0014 18.3 0.2 1.2 1 0 0 1 1 1 1 Dephospho-CoA kinase TcdA_TcdB PF12919.7 NODE_73217_length_215_cov_59.016667_g65276_i0reverse_frame_1 - 0.0041 16.5 0.4 0.0048 16.3 0.4 1.0 1 0 0 1 1 1 1 TcdA/TcdB catalytic glycosyltransferase domain DUF601 PF04642.12 NODE_73201_length_215_cov_75.572222_g65260_i0forward_frame_1 - 0.0018 17.9 0.7 0.002 17.7 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF601 EntA_Immun PF08951.10 NODE_73201_length_215_cov_75.572222_g65260_i0forward_frame_1 - 0.0054 17.1 0.7 0.0071 16.7 0.7 1.3 1 1 0 1 1 1 1 Enterocin A Immunity DUF4298 PF14131.6 NODE_73201_length_215_cov_75.572222_g65260_i0forward_frame_1 - 0.051 13.5 0.7 0.17 11.8 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) Alba PF01918.21 NODE_73177_length_215_cov_316.611111_g65236_i0forward_frame_1 - 0.033 14.0 0.1 0.052 13.4 0.1 1.2 1 0 0 1 1 1 0 Alba Asp PF00026.23 NODE_73175_length_215_cov_795.000000_g65234_i0forward_frame_1 - 3.3e-09 36.6 0.1 3.4e-09 36.5 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease UL97 PF06734.12 NODE_73175_length_215_cov_795.000000_g65234_i0forward_frame_1 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 UL97 CD225 PF04505.12 NODE_73174_length_215_cov_809.933333_g65233_i0reverse_frame_1 - 0.084 13.0 0.4 0.12 12.5 0.4 1.3 1 0 0 1 1 1 0 Interferon-induced transmembrane protein AbfS_sensor PF18225.1 NODE_73174_length_215_cov_809.933333_g65233_i0forward_frame_1 - 0.054 13.4 0.0 0.072 13.0 0.0 1.2 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain S-AdoMet_synt_C PF02773.16 NODE_73172_length_215_cov_13840.916667_g65231_i0forward_frame_1 - 6.4e-19 68.3 0.0 6.8e-19 68.2 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain PRA-CH PF01502.18 NODE_73172_length_215_cov_13840.916667_g65231_i0forward_frame_1 - 0.15 11.9 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-AMP cyclohydrolase Sigma70_r1_1 PF03979.14 NODE_73172_length_215_cov_13840.916667_g65231_i0forward_frame_1 - 0.18 11.9 0.0 0.23 11.5 0.0 1.1 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 Ycf1 PF05758.12 NODE_73169_length_216_cov_0.740331_g65228_i0reverse_frame_1 - 1.2 7.0 8.7 1.3 6.8 8.7 1.0 1 0 0 1 1 1 0 Ycf1 PMT PF02366.18 NODE_73166_length_216_cov_0.872928_g65225_i0reverse_frame_1 - 0.064 12.8 2.9 0.065 12.8 2.9 1.1 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Bunya_NS-S PF01104.17 NODE_73160_length_216_cov_0.883978_g65219_i0reverse_frame_1 - 0.062 13.1 0.1 0.073 12.9 0.1 1.2 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-s OrfB_Zn_ribbon PF07282.11 NODE_73160_length_216_cov_0.883978_g65219_i0forward_frame_1 - 0.08 12.9 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Dimer_Tnp_Tn5 PF02281.16 NODE_73158_length_216_cov_0.883978_g65217_i0forward_frame_1 - 0.17 11.6 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Transposase Tn5 dimerisation domain Hydrolase PF00702.26 NODE_73151_length_216_cov_0.950276_g65210_i0forward_frame_1 - 0.056 13.7 0.0 0.069 13.4 0.0 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase RhodobacterPufX PF11511.8 NODE_73148_length_216_cov_0.988950_g65207_i0reverse_frame_1 - 0.0085 15.7 1.7 0.0085 15.7 1.7 1.3 1 1 0 1 1 1 1 Intrinsic membrane protein PufX Serine_protease PF18405.1 NODE_73148_length_216_cov_0.988950_g65207_i0reverse_frame_1 - 0.13 11.4 0.4 0.14 11.3 0.4 1.0 1 0 0 1 1 1 0 Gammaproteobacterial serine protease Lamprin PF06403.11 NODE_73142_length_216_cov_1.016575_g65201_i0forward_frame_1 - 0.094 12.7 2.4 0.088 12.8 2.4 1.1 1 0 0 1 1 1 0 Lamprin BTB PF00651.31 NODE_73134_length_216_cov_1.093923_g65193_i0reverse_frame_1 - 6.5e-12 45.7 0.0 7.2e-12 45.5 0.0 1.0 1 0 0 1 1 1 1 BTB/POZ domain DUF3684 PF12449.8 NODE_73125_length_216_cov_1.160221_g65184_i0forward_frame_1 - 0.19 9.5 0.3 0.21 9.4 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3684) Microvir_J PF04726.13 NODE_73121_length_216_cov_1.187845_g65180_i0forward_frame_1 - 0.24 11.4 4.5 0.2 11.6 2.9 1.8 1 1 0 1 1 1 0 Microvirus J protein DUF999 PF06198.11 NODE_73112_length_216_cov_1.248619_g65171_i0forward_frame_1 - 0.039 14.0 0.2 0.045 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF999) BCMA-Tall_bind PF09257.10 NODE_73103_length_216_cov_1.292818_g65162_i0reverse_frame_1 - 1.3 9.1 7.1 0.15 12.2 3.1 1.4 2 0 0 2 2 2 0 BCMA, TALL-1 binding Rubella_E2 PF05749.11 NODE_73101_length_216_cov_1.303867_g65160_i0reverse_frame_1 - 0.044 13.2 6.1 0.048 13.1 6.1 1.1 1 0 0 1 1 1 0 Rubella membrane glycoprotein E2 Med3 PF11593.8 NODE_73101_length_216_cov_1.303867_g65160_i0reverse_frame_1 - 9.8 5.2 8.5 10 5.2 8.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal VKG_Carbox PF05090.14 NODE_73086_length_216_cov_1.325967_g65145_i0reverse_frame_1 - 0.04 12.7 0.5 0.04 12.7 0.5 1.0 1 0 0 1 1 1 0 Vitamin K-dependent gamma-carboxylase DUF2516 PF10724.9 NODE_73086_length_216_cov_1.325967_g65145_i0reverse_frame_1 - 0.07 13.4 0.4 0.094 13.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2516) RRM PF10378.9 NODE_73079_length_216_cov_1.325967_g65138_i0forward_frame_1 - 0.11 12.3 0.1 0.14 11.9 0.1 1.2 1 0 0 1 1 1 0 Putative RRM domain B12D PF06522.11 NODE_73074_length_216_cov_1.397790_g65133_i0forward_frame_1 - 0.19 11.6 0.1 0.28 11.0 0.1 1.3 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Fis1_TPR_N PF14852.6 NODE_73073_length_216_cov_1.408840_g65132_i0reverse_frame_1 - 0.0074 15.9 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Fis1 N-terminal tetratricopeptide repeat Transposase_22 PF02994.14 NODE_73073_length_216_cov_1.408840_g65132_i0reverse_frame_1 - 0.14 12.4 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 L1 transposable element RBD-like domain DUF587 PF04532.12 NODE_73073_length_216_cov_1.408840_g65132_i0forward_frame_1 - 0.03 13.6 0.1 0.031 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF587) Snf7 PF03357.21 NODE_73068_length_216_cov_1.453039_g65127_i0forward_frame_1 - 0.013 15.1 5.8 0.016 14.8 5.8 1.0 1 0 0 1 1 1 0 Snf7 DUF3573 PF12097.8 NODE_73068_length_216_cov_1.453039_g65127_i0forward_frame_1 - 0.063 12.1 2.2 0.069 12.0 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) TMEM171 PF15471.6 NODE_73064_length_216_cov_1.469613_g65123_i0reverse_frame_1 - 0.051 12.6 0.1 0.054 12.5 0.1 1.0 1 0 0 1 1 1 0 Transmembrane protein family 171 zf_C2H2_6 PF18450.1 NODE_73064_length_216_cov_1.469613_g65123_i0reverse_frame_1 - 0.097 12.4 1.1 0.25 11.1 0.1 2.0 2 0 0 2 2 2 0 Zinc Finger domain Ras PF00071.22 NODE_73062_length_216_cov_1.524862_g65121_i0forward_frame_1 - 2.5e-16 59.7 0.0 2.7e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_73062_length_216_cov_1.524862_g65121_i0forward_frame_1 - 9.8e-13 48.4 0.0 1e-12 48.3 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_73062_length_216_cov_1.524862_g65121_i0forward_frame_1 - 0.075 12.5 0.0 0.08 12.4 0.0 1.0 1 0 0 1 1 1 0 ADP-ribosylation factor family DUF716 PF04819.12 NODE_73057_length_216_cov_1.552486_g65116_i0reverse_frame_1 - 0.022 14.4 1.0 0.028 14.1 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF716) Pericardin_rpt PF07054.11 NODE_73048_length_216_cov_1.651934_g65107_i0reverse_frame_1 - 0.082 13.0 2.1 0.16 12.1 2.1 1.5 1 0 0 1 1 1 0 Pericardin like repeat zinc_ribbon_4 PF13717.6 NODE_73045_length_216_cov_1.674033_g65104_i0reverse_frame_1 - 0.048 13.6 0.1 1.4 8.9 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain AAA PF00004.29 NODE_73035_length_216_cov_1.740331_g65094_i0forward_frame_1 - 5.9e-17 62.3 0.5 6.1e-17 62.3 0.5 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Synthase_beta PF11421.8 NODE_73035_length_216_cov_1.740331_g65094_i0forward_frame_1 - 0.12 13.0 0.4 0.2 12.4 0.4 1.3 1 0 0 1 1 1 0 ATP synthase F1 beta subunit MBD PF01429.19 NODE_73027_length_216_cov_1.762431_g65086_i0reverse_frame_1 - 0.035 13.8 1.1 0.044 13.5 1.1 1.1 1 0 0 1 1 1 0 Methyl-CpG binding domain GCP_N_terminal PF17681.1 NODE_73017_length_216_cov_1.806630_g65076_i0reverse_frame_1 - 0.00018 21.3 0.0 0.00018 21.3 0.0 1.1 1 0 0 1 1 1 1 Gamma tubulin complex component N-terminal DUF436 PF04260.12 NODE_73013_length_216_cov_1.856354_g65072_i0reverse_frame_1 - 0.036 13.7 0.0 0.043 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF436) DUF809 PF05663.11 NODE_73005_length_216_cov_1.895028_g65064_i0reverse_frame_1 - 0.11 12.6 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) LMBR1 PF04791.16 NODE_73000_length_216_cov_1.922652_g65059_i0reverse_frame_1 - 3.9e-07 29.4 3.2 3.9e-07 29.4 3.2 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein Orthopox_A36R PF05950.11 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 0.28 11.3 4.9 0.32 11.1 4.9 1.0 1 0 0 1 1 1 0 Orthopoxvirus A36R protein Sporozoite_P67 PF05642.11 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 0.37 8.8 5.4 0.39 8.7 5.4 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen FAM176 PF14851.6 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 0.61 9.7 4.6 0.67 9.6 4.6 1.1 1 0 0 1 1 1 0 FAM176 family Presenilin PF01080.17 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 0.93 8.2 3.0 0.94 8.2 3.0 1.0 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 1.4 8.1 2.5 1.2 8.2 2.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter SWIM PF04434.17 NODE_72993_length_216_cov_1.988950_g65052_i0reverse_frame_1 - 0.16 11.6 0.2 0.25 11.0 0.2 1.3 1 0 0 1 1 1 0 SWIM zinc finger TGT PF01702.18 NODE_72988_length_216_cov_2.066298_g65047_i0reverse_frame_1 - 0.014 14.6 0.0 0.014 14.6 0.0 1.0 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase NIBRIN_BRCT_II PF16508.5 NODE_72988_length_216_cov_2.066298_g65047_i0reverse_frame_1 - 0.14 12.5 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Second BRCT domain on Nijmegen syndrome breakage protein TMEM239 PF15841.5 NODE_72987_length_216_cov_2.093923_g65046_i0forward_frame_1 - 1.4 8.8 7.2 1.6 8.6 7.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family Death PF00531.22 NODE_72986_length_216_cov_2.099448_g65045_i0reverse_frame_1 - 0.063 13.4 0.2 0.11 12.7 0.1 1.5 2 0 0 2 2 2 0 Death domain HVSL PF09749.9 NODE_72973_length_216_cov_2.193370_g65032_i0reverse_frame_1 - 0.0036 16.8 1.5 0.0041 16.6 1.5 1.0 1 0 0 1 1 1 1 Uncharacterised conserved protein YmcE_antitoxin PF15939.5 NODE_72969_length_216_cov_2.215470_g65028_i0forward_frame_1 - 0.33 11.1 5.2 0.22 11.7 3.9 1.4 1 1 1 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system ARL6IP6 PF15062.6 NODE_72964_length_216_cov_2.276243_g65023_i0reverse_frame_1 - 0.084 13.0 0.4 0.1 12.8 0.4 1.1 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix Ribosomal_S14 PF00253.21 NODE_72961_length_216_cov_2.298343_g65020_i0reverse_frame_1 - 0.24 11.2 4.2 0.41 10.4 4.2 1.3 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e vMSA PF00695.19 NODE_72959_length_216_cov_2.325967_g65018_i0forward_frame_1 - 0.21 10.6 2.7 0.23 10.5 2.7 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus COBRA1 PF06209.13 NODE_72957_length_216_cov_2.342541_g65016_i0reverse_frame_1 - 0.076 11.9 1.1 0.083 11.8 1.1 1.0 1 0 0 1 1 1 0 Cofactor of BRCA1 (COBRA1) Epimerase PF01370.21 NODE_72952_length_216_cov_2.408840_g65011_i0forward_frame_1 - 2.3e-05 24.0 0.0 2.5e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 NODE_72952_length_216_cov_2.408840_g65011_i0forward_frame_1 - 0.00054 19.9 0.0 0.00056 19.8 0.0 1.0 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 NODE_72952_length_216_cov_2.408840_g65011_i0forward_frame_1 - 0.0093 15.0 0.0 0.0096 15.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NADH_dehy_S2_C PF06444.11 NODE_72947_length_216_cov_2.430939_g65006_i0forward_frame_1 - 0.092 13.3 2.1 0.21 12.1 2.1 1.6 1 1 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus Caveolin PF01146.17 NODE_72947_length_216_cov_2.430939_g65006_i0forward_frame_1 - 0.1 12.6 1.6 0.11 12.5 1.6 1.1 1 0 0 1 1 1 0 Caveolin RBFA PF02033.18 NODE_72946_length_216_cov_2.453039_g65005_i0forward_frame_1 - 0.0099 16.3 0.0 0.012 16.1 0.0 1.2 1 0 0 1 1 1 1 Ribosome-binding factor A Phage_integrase PF00589.22 NODE_72946_length_216_cov_2.453039_g65005_i0forward_frame_1 - 0.042 13.6 0.1 0.042 13.6 0.1 1.1 1 0 0 1 1 1 0 Phage integrase family FIN1 PF17300.2 NODE_72945_length_216_cov_2.464088_g65004_i0reverse_frame_1 - 0.17 11.3 4.8 0.19 11.2 4.8 1.1 1 0 0 1 1 1 0 Filaments in between nuclei protein-1 Ago_N_1 PF18351.1 NODE_72938_length_216_cov_2.624309_g64997_i0reverse_frame_1 - 0.2 12.1 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 Fungal Argonaute N-terminal domain hEGF PF12661.7 NODE_72937_length_216_cov_2.646409_g64996_i0reverse_frame_1 - 0.8 10.4 0.2 0.8 10.4 0.2 2.6 4 0 0 4 4 4 0 Human growth factor-like EGF Phage_Mu_Gam PF07352.12 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.00062 19.7 2.5 0.00068 19.6 2.5 1.1 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein Fzo_mitofusin PF04799.13 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.0064 16.0 5.1 0.0067 16.0 5.1 1.0 1 0 0 1 1 1 1 fzo-like conserved region TnpV PF14198.6 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.038 14.0 3.5 0.041 13.9 3.5 1.1 1 0 0 1 1 1 0 Transposon-encoded protein TnpV Nre_C PF04895.12 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.11 12.5 0.4 0.13 12.2 0.4 1.1 1 0 0 1 1 1 0 Archaeal Nre, C-terminal DUF745 PF05335.13 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.13 12.0 2.6 0.13 11.9 2.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF745) YlqD PF11068.8 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.27 11.6 6.3 0.3 11.5 6.3 1.0 1 0 0 1 1 1 0 YlqD protein IKKbetaNEMObind PF12179.8 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 1.1 9.3 4.9 8 6.6 0.5 2.4 2 1 0 2 2 2 0 I-kappa-kinase-beta NEMO binding domain Pox_A12 PF04651.13 NODE_72935_length_216_cov_2.662983_g64994_i0forward_frame_1 - 0.099 12.7 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Poxvirus A12 protein nos_propeller PF18764.1 NODE_72932_length_216_cov_2.690608_g64991_i0forward_frame_1 - 0.048 13.6 0.0 0.065 13.2 0.0 1.1 1 0 0 1 1 1 0 Nitrous oxide reductase propeller repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks338.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks338.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks338.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks338.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LapA_dom PF06305.11 NODE_72928_length_216_cov_2.889503_g64987_i0forward_frame_1 - 0.42 10.4 4.4 1 9.2 3.5 1.9 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain EOS1 PF12326.8 NODE_72917_length_216_cov_3.165746_g64976_i0forward_frame_1 - 0.6 10.0 3.6 0.8 9.6 3.6 1.2 1 0 0 1 1 1 0 N-glycosylation protein ABC2_membrane_3 PF12698.7 NODE_72907_length_216_cov_24.635359_g64966_i0forward_frame_1 - 0.016 14.3 0.2 0.017 14.3 0.2 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Pox_E10 PF04805.12 NODE_72907_length_216_cov_24.635359_g64966_i0forward_frame_1 - 0.69 9.8 3.8 0.92 9.4 3.8 1.2 1 0 0 1 1 1 0 E10-like protein conserved region CD24 PF14984.6 NODE_72903_length_216_cov_30.215470_g64962_i0reverse_frame_1 - 0.041 14.1 0.2 0.041 14.1 0.2 1.5 2 0 0 2 2 2 0 CD24 protein Rrn6 PF10214.9 NODE_72901_length_216_cov_32.209945_g64960_i0reverse_frame_1 - 0.083 11.4 0.9 0.089 11.3 0.9 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor UCH PF00443.29 NODE_72895_length_216_cov_39.707182_g64954_i0reverse_frame_1 - 8.5e-12 45.1 0.5 1e-11 44.8 0.5 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF3136 PF11334.8 NODE_72892_length_216_cov_45.635359_g64951_i0reverse_frame_1 - 0.11 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) PAS_3 PF08447.12 NODE_72891_length_216_cov_45.895028_g64950_i0reverse_frame_1 - 0.053 13.8 0.0 1.3 9.3 0.0 2.0 1 1 1 2 2 2 0 PAS fold Pkinase PF00069.25 NODE_72883_length_216_cov_52.392265_g64942_i0reverse_frame_1 - 0.015 14.7 0.1 0.017 14.5 0.1 1.0 1 0 0 1 1 1 0 Protein kinase domain KKLCAg1 PF15204.6 NODE_72880_length_216_cov_54.513812_g64939_i0reverse_frame_1 - 0.014 15.5 0.3 0.015 15.4 0.3 1.1 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 SOCS PF12610.8 NODE_72877_length_216_cov_56.696133_g64936_i0forward_frame_1 - 0.036 14.5 1.2 0.061 13.7 1.2 1.3 1 0 0 1 1 1 0 Suppressor of cytokine signalling IlvC PF01450.19 NODE_72874_length_216_cov_60.215470_g64933_i0forward_frame_1 - 0.00013 22.3 0.1 0.00014 22.1 0.1 1.0 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain Yuri_gagarin PF15934.5 NODE_72872_length_216_cov_62.911602_g64931_i0forward_frame_1 - 0.046 13.6 0.2 0.053 13.4 0.2 1.0 1 0 0 1 1 1 0 Yuri gagarin RNA_pol_A_bac PF01000.26 NODE_72869_length_216_cov_68.646409_g64928_i0forward_frame_1 - 9.5e-08 32.4 0.1 1.2e-07 32.1 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain Evr1_Alr PF04777.13 NODE_72841_length_216_cov_223.497238_g64900_i0reverse_frame_1 - 1.2e-06 28.9 0.0 1.5e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Erv1 / Alr family Otopetrin PF03189.13 NODE_72840_length_216_cov_240.569061_g64899_i0forward_frame_1 - 0.0047 15.8 0.2 0.0047 15.8 0.2 1.0 1 0 0 1 1 1 1 Otopetrin SieB PF14163.6 NODE_72840_length_216_cov_240.569061_g64899_i0forward_frame_1 - 0.0056 16.2 0.2 0.0058 16.1 0.2 1.0 1 0 0 1 1 1 1 Super-infection exclusion protein B Spo7 PF03907.13 NODE_72840_length_216_cov_240.569061_g64899_i0forward_frame_1 - 0.046 13.2 0.4 0.049 13.1 0.4 1.0 1 0 0 1 1 1 0 Spo7-like protein PMR5N PF14416.6 NODE_72835_length_216_cov_470.790055_g64894_i0reverse_frame_1 - 0.0088 16.3 0.4 0.011 16.1 0.4 1.2 1 0 0 1 1 1 1 PMR5 N terminal Domain Ammonium_transp PF00909.21 NODE_72827_length_216_cov_1262.856354_g64886_i0forward_frame_1 - 5.9e-15 54.9 6.3 6.6e-15 54.7 6.3 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family DUF5516 PF17637.2 NODE_72825_length_217_cov_0.818681_g64884_i0reverse_frame_2 - 0.061 13.1 0.3 0.1 12.3 0.3 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5516) Protamine_P2 PF00841.19 NODE_72822_length_217_cov_0.868132_g64881_i0forward_frame_3 - 0.073 13.6 0.3 0.12 12.8 0.3 1.3 1 0 0 1 1 1 0 Sperm histone P2 DUF4520 PF15016.6 NODE_72821_length_217_cov_0.873626_g64880_i0reverse_frame_3 - 0.14 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4520) Na_Ca_ex_C PF16494.5 NODE_72818_length_217_cov_0.873626_g64877_i0reverse_frame_3 - 0.064 13.7 0.2 0.081 13.4 0.2 1.2 1 0 0 1 1 1 0 C-terminal extension of sodium/calcium exchanger domain DUF2811 PF10929.8 NODE_72818_length_217_cov_0.873626_g64877_i0reverse_frame_3 - 0.076 13.3 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2811) TNFR_16_TM PF18422.1 NODE_72814_length_217_cov_0.879121_g64873_i0reverse_frame_3 - 0.16 12.0 0.3 0.23 11.5 0.3 1.2 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain Tmemb_9 PF05434.11 NODE_72814_length_217_cov_0.879121_g64873_i0reverse_frame_2 - 0.056 13.3 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 TMEM9 Enterotoxin_HS1 PF08090.11 NODE_72812_length_217_cov_0.879121_g64871_i0reverse_frame_2 - 1.5 8.8 7.8 29 4.7 3.0 3.0 2 1 1 3 3 3 0 Heat stable E.coli enterotoxin 1 PMG PF05287.12 NODE_72812_length_217_cov_0.879121_g64871_i0forward_frame_3 - 0.024 14.7 0.2 0.026 14.6 0.2 1.2 1 0 0 1 1 1 0 PMG protein FAM24 PF15193.6 NODE_72811_length_217_cov_0.879121_g64870_i0reverse_frame_3 - 0.00092 19.9 4.7 0.0011 19.7 4.7 1.2 1 0 0 1 1 1 1 FAM24 family Helicase_IV_N PF12462.8 NODE_72807_length_217_cov_0.879121_g64866_i0reverse_frame_3 - 0.097 12.6 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal DUF4705 PF15788.5 NODE_72805_length_217_cov_0.879121_g64864_i0forward_frame_3 - 0.05 13.9 0.3 0.088 13.1 0.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4705) Mab-21 PF03281.14 NODE_72804_length_217_cov_0.879121_g64863_i0reverse_frame_3 - 0.075 12.3 0.0 0.094 12.0 0.0 1.0 1 0 0 1 1 1 0 Mab-21 protein CBF PF03914.17 NODE_72803_length_217_cov_0.879121_g64862_i0reverse_frame_2 - 0.0014 18.7 0.2 0.0015 18.6 0.2 1.0 1 0 0 1 1 1 1 CBF/Mak21 family Ribosomal_S16 PF00886.19 NODE_72801_length_217_cov_0.923077_g64860_i0forward_frame_3 - 0.02 15.0 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S16 BES1_N PF05687.13 NODE_72797_length_217_cov_0.978022_g64856_i0forward_frame_2 - 0.046 14.1 6.9 0.051 14.0 6.9 1.0 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal Smoa_sbd PF17885.1 NODE_72793_length_217_cov_1.038462_g64852_i0forward_frame_2 - 0.16 12.1 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Styrene monooxygenase A putative substrate binding domain S1-P1_nuclease PF02265.16 NODE_72790_length_217_cov_1.060440_g64849_i0reverse_frame_3 - 0.00016 21.6 0.0 0.00017 21.5 0.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease GATase_5 PF13507.6 NODE_72786_length_217_cov_1.082418_g64845_i0reverse_frame_3 - 1.3e-16 60.5 0.0 1.5e-16 60.3 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain ORC6 PF05460.13 NODE_72785_length_217_cov_1.087912_g64844_i0reverse_frame_2 - 0.15 11.3 0.0 0.18 11.0 0.0 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Ras PF00071.22 NODE_72784_length_217_cov_1.093407_g64843_i0reverse_frame_2 - 0.00058 19.5 0.2 0.0011 18.5 0.1 1.4 1 1 0 1 1 1 1 Ras family Roc PF08477.13 NODE_72784_length_217_cov_1.093407_g64843_i0reverse_frame_2 - 0.014 15.6 1.3 0.035 14.3 1.3 1.8 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Protamine_P1 PF00260.20 NODE_72782_length_217_cov_1.098901_g64841_i0reverse_frame_3 - 0.68 10.1 12.0 0.94 9.6 12.0 1.3 1 0 0 1 1 1 0 Protamine P1 zf-WRNIP1_ubi PF18279.1 NODE_72782_length_217_cov_1.098901_g64841_i0reverse_frame_2 - 0.18 12.5 2.1 3.9 8.3 1.1 2.5 2 0 0 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain BCMA-Tall_bind PF09257.10 NODE_72777_length_217_cov_1.148352_g64836_i0reverse_frame_2 - 0.041 14.0 0.8 0.072 13.2 0.8 1.4 1 1 0 1 1 1 0 BCMA, TALL-1 binding U3_assoc_6 PF08640.11 NODE_72773_length_217_cov_1.181319_g64832_i0reverse_frame_3 - 0.00025 21.0 0.7 0.00034 20.6 0.7 1.2 1 0 0 1 1 1 1 U3 small nucleolar RNA-associated protein 6 VasL PF12486.8 NODE_72773_length_217_cov_1.181319_g64832_i0reverse_frame_2 - 0.17 11.7 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, EvfB, or VasL RVT_1 PF00078.27 NODE_72772_length_217_cov_1.197802_g64831_i0reverse_frame_3 - 0.056 12.9 0.0 0.07 12.6 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) BRE1 PF08647.11 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.014 15.5 4.6 0.016 15.3 4.6 1.0 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase SLATT_6 PF18169.1 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.023 14.3 0.1 0.038 13.6 0.1 1.3 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 ATP-synt_D PF01813.17 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.025 14.4 3.9 0.028 14.3 3.9 1.0 1 0 0 1 1 1 0 ATP synthase subunit D KxDL PF10241.9 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.028 14.7 3.2 0.032 14.5 3.2 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein DUF3287 PF11690.8 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.061 13.1 2.0 0.091 12.5 2.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3287) DUF1664 PF07889.12 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.17 11.9 2.6 0.19 11.7 2.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Transposase_22 PF02994.14 NODE_72764_length_217_cov_1.269231_g64823_i0forward_frame_3 - 0.08 13.1 0.0 0.095 12.9 0.0 1.0 1 0 0 1 1 1 0 L1 transposable element RBD-like domain Barttin PF15462.6 NODE_72762_length_217_cov_1.274725_g64821_i0forward_frame_3 - 0.075 12.8 2.2 0.075 12.8 2.2 1.0 1 0 0 1 1 1 0 Bartter syndrome, infantile, with sensorineural deafness (Barttin) DUF2754 PF10953.8 NODE_72761_length_217_cov_1.274725_g64820_i0reverse_frame_2 - 0.068 13.4 0.1 0.086 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) MFS_1 PF07690.16 NODE_72759_length_217_cov_1.313187_g64818_i0forward_frame_3 - 3e-05 23.1 3.7 3.2e-05 23.0 3.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily LacY_symp PF01306.19 NODE_72759_length_217_cov_1.313187_g64818_i0forward_frame_3 - 0.0051 15.6 0.2 0.0059 15.4 0.2 1.2 1 0 0 1 1 1 1 LacY proton/sugar symporter Sugar_tr PF00083.24 NODE_72759_length_217_cov_1.313187_g64818_i0forward_frame_3 - 0.0052 15.7 1.0 0.0054 15.6 1.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter Mit_KHE1 PF10173.9 NODE_72757_length_217_cov_1.313187_g64816_i0forward_frame_3 - 0.0099 16.0 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 1 Mitochondrial K+-H+ exchange-related FPRL1_inhibitor PF16104.5 NODE_72757_length_217_cov_1.313187_g64816_i0forward_frame_3 - 0.049 13.8 0.1 0.058 13.5 0.1 1.2 1 1 0 1 1 1 0 Formyl peptide receptor-like 1 inhibitory protein EST1_DNA_bind PF10373.9 NODE_72756_length_217_cov_1.313187_g64815_i0forward_frame_2 - 0.27 10.7 1.9 0.29 10.6 1.9 1.1 1 0 0 1 1 1 0 Est1 DNA/RNA binding domain Xol-1_GHMP-like PF09109.10 NODE_72751_length_217_cov_1.313187_g64810_i0forward_frame_2 - 0.16 11.8 0.1 0.19 11.6 0.1 1.2 1 1 0 1 1 1 0 Switch protein XOL-1, GHMP-like MSSP PF03940.13 NODE_72748_length_217_cov_1.318681_g64807_i0forward_frame_3 - 0.018 14.6 5.8 0.018 14.6 5.8 1.9 2 0 0 2 2 2 0 Male specific sperm protein Patched PF02460.18 NODE_72747_length_217_cov_1.318681_g64806_i0reverse_frame_3 - 1.6 6.7 8.1 1.6 6.7 8.1 1.0 1 0 0 1 1 1 0 Patched family LRR_6 PF13516.6 NODE_72745_length_217_cov_1.318681_g64804_i0reverse_frame_2 - 0.011 15.7 0.1 0.084 13.0 0.1 2.3 3 0 0 3 3 3 0 Leucine Rich repeat LRR_8 PF13855.6 NODE_72745_length_217_cov_1.318681_g64804_i0reverse_frame_2 - 0.04 13.7 0.1 0.29 10.9 0.1 2.2 3 0 0 3 3 3 0 Leucine rich repeat LRR_4 PF12799.7 NODE_72745_length_217_cov_1.318681_g64804_i0reverse_frame_2 - 0.046 14.2 1.9 0.5 10.9 1.9 2.3 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) DUF1410 PF07198.11 NODE_72745_length_217_cov_1.318681_g64804_i0reverse_frame_2 - 0.052 14.1 0.9 0.11 13.0 0.1 1.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1410) DUF1430 PF07242.11 NODE_72741_length_217_cov_1.324176_g64800_i0reverse_frame_2 - 0.0064 16.7 1.0 0.0086 16.3 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1430) Benyvirus_14KDa PF07255.11 NODE_72740_length_217_cov_1.340659_g64799_i0reverse_frame_2 - 0.11 12.7 0.2 0.12 12.6 0.2 1.1 1 0 0 1 1 1 0 Benyvirus 14KDa protein THDPS_N PF14790.6 NODE_72735_length_217_cov_1.368132_g64794_i0reverse_frame_3 - 0.0099 15.7 0.0 0.011 15.6 0.0 1.1 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal Lustrin_cystein PF14625.6 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.0028 18.0 16.8 0.32 11.4 4.1 3.2 1 1 2 3 3 3 2 Lustrin, cysteine-rich repeated domain FYRN PF05964.14 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.021 14.7 1.6 0.35 10.8 0.1 2.2 2 0 0 2 2 2 0 F/Y-rich N-terminus Granulin PF00396.18 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.08 13.3 14.0 1.6 9.1 0.8 3.0 1 1 1 2 2 2 0 Granulin Opy2 PF09463.10 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.26 11.6 11.9 4.4 7.7 4.0 3.0 2 1 1 3 3 3 0 Opy2 protein Inhibitor_I36 PF03995.13 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.52 10.3 7.6 6.9 6.7 0.2 3.1 3 0 0 3 3 3 0 Peptidase inhibitor family I36 Ephrin_rec_like PF07699.13 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 1.5 8.6 19.0 9.9 6.0 13.0 3.4 1 1 1 2 2 2 0 Putative ephrin-receptor like AidB_N PF18158.1 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 4.8 7.1 6.5 5.1 7.0 0.7 2.1 2 0 0 2 2 2 0 Adaptive response protein AidB N-terminal domain Frataxin_Cyay PF01491.16 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_2 - 0.02 15.0 0.0 0.021 14.9 0.0 1.1 1 0 0 1 1 1 0 Frataxin-like domain GSAP-16 PF14959.6 NODE_72732_length_217_cov_1.379121_g64791_i0reverse_frame_3 - 0.061 13.2 0.1 0.074 12.9 0.1 1.2 1 0 0 1 1 1 0 gamma-Secretase-activating protein C-term TTL PF03133.15 NODE_72731_length_217_cov_1.379121_g64790_i0forward_frame_2 - 1.5e-20 73.5 1.2 1.8e-20 73.3 1.2 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ODC_AZ PF02100.17 NODE_72730_length_217_cov_1.384615_g64789_i0forward_frame_2 - 0.018 15.0 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme CP2 PF04516.15 NODE_72729_length_217_cov_1.423077_g64788_i0reverse_frame_3 - 0.05 12.9 0.3 0.054 12.8 0.3 1.0 1 0 0 1 1 1 0 CP2 transcription factor Imm-NTF2-2 PF15631.6 NODE_72726_length_217_cov_1.439560_g64785_i0reverse_frame_2 - 0.039 14.2 0.4 0.054 13.8 0.4 1.2 1 0 0 1 1 1 0 NTF2 fold immunity protein TMEM156 PF15106.6 NODE_72726_length_217_cov_1.439560_g64785_i0forward_frame_2 - 0.72 9.3 4.3 0.9 8.9 4.3 1.1 1 0 0 1 1 1 0 TMEM156 protein family FERM_N_2 PF18038.1 NODE_72717_length_217_cov_1.478022_g64776_i0forward_frame_2 - 0.06 14.2 0.0 0.063 14.1 0.0 1.1 1 0 0 1 1 1 0 FERM N-terminal domain LigT_PEase PF02834.16 NODE_72715_length_217_cov_1.489011_g64774_i0forward_frame_2 - 0.046 13.9 0.2 0.081 13.1 0.1 1.6 2 0 0 2 2 2 0 LigT like Phosphoesterase Helo_like_N PF17111.5 NODE_72714_length_217_cov_1.494505_g64773_i0reverse_frame_3 - 0.091 12.1 0.1 0.096 12.0 0.1 1.0 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins PGG PF13962.6 NODE_72707_length_217_cov_1.543956_g64766_i0forward_frame_2 - 0.1 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function MotB_plug PF13677.6 NODE_72705_length_217_cov_1.554945_g64764_i0forward_frame_3 - 0.25 11.0 1.6 0.44 10.2 1.0 1.7 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB Vut_1 PF02592.15 NODE_72705_length_217_cov_1.554945_g64764_i0forward_frame_2 - 0.037 14.3 0.5 0.042 14.2 0.5 1.0 1 0 0 1 1 1 0 Putative vitamin uptake transporter RVT_1 PF00078.27 NODE_72703_length_217_cov_1.560440_g64762_i0forward_frame_2 - 0.0048 16.4 0.0 0.0059 16.1 0.0 1.2 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DAP_B PF07930.12 NODE_72702_length_217_cov_1.565934_g64761_i0reverse_frame_2 - 0.023 14.7 0.0 0.027 14.5 0.0 1.0 1 0 0 1 1 1 0 D-aminopeptidase, domain B Corona_S2 PF01601.16 NODE_72701_length_217_cov_1.587912_g64760_i0forward_frame_3 - 0.2 10.1 1.3 0.19 10.2 1.3 1.0 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein Transket_pyr PF02779.24 NODE_72701_length_217_cov_1.587912_g64760_i0forward_frame_2 - 1.6e-07 31.2 0.0 1.7e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain PET117 PF15786.5 NODE_72700_length_217_cov_1.587912_g64759_i0reverse_frame_3 - 0.07 13.4 0.0 0.084 13.1 0.0 1.2 1 0 0 1 1 1 0 PET assembly of cytochrome c oxidase, mitochondrial Sigma70_r2 PF04542.14 NODE_72699_length_217_cov_1.593407_g64758_i0forward_frame_2 - 0.052 13.3 0.1 0.073 12.8 0.1 1.2 1 0 0 1 1 1 0 Sigma-70 region 2 Nbl1_Borealin_N PF10444.9 NODE_72699_length_217_cov_1.593407_g64758_i0forward_frame_2 - 0.11 12.1 0.2 0.18 11.5 0.2 1.3 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal YkuI_C PF10388.9 NODE_72697_length_217_cov_1.620879_g64756_i0reverse_frame_2 - 0.0074 16.1 0.6 0.0082 16.0 0.6 1.1 1 0 0 1 1 1 1 EAL-domain associated signalling protein domain MLIP PF15274.6 NODE_72697_length_217_cov_1.620879_g64756_i0reverse_frame_2 - 0.11 12.4 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Muscular LMNA-interacting protein TPR_2 PF07719.17 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 2.1e-07 30.6 0.0 0.029 14.5 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 8e-06 25.5 0.0 0.032 14.1 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.005 17.0 0.0 2.3 8.6 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.007 17.0 0.0 1.2 9.9 0.0 2.1 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.011 16.0 0.1 0.32 11.5 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.013 15.1 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB1_HrpK) Coatomer_E PF04733.14 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.021 14.2 0.0 0.024 14.1 0.0 1.0 1 0 0 1 1 1 0 Coatomer epsilon subunit TPR_11 PF13414.6 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.027 14.2 0.1 0.51 10.1 0.0 2.6 1 1 2 3 3 3 0 TPR repeat MORN PF02493.20 NODE_72693_length_217_cov_1.642857_g64752_i0reverse_frame_3 - 0.02 14.8 3.0 0.046 13.6 0.1 2.7 3 0 0 3 3 3 0 MORN repeat DUF1435 PF07256.12 NODE_72693_length_217_cov_1.642857_g64752_i0forward_frame_3 - 0.031 14.4 0.4 0.051 13.7 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1435) Yae1_N PF09811.9 NODE_72691_length_217_cov_1.664835_g64750_i0reverse_frame_3 - 0.074 12.8 1.4 0.11 12.2 1.4 1.2 1 0 0 1 1 1 0 Essential protein Yae1, N terminal PDGF PF00341.17 NODE_72689_length_217_cov_1.692308_g64748_i0reverse_frame_3 - 0.13 12.6 0.8 0.21 11.9 0.8 1.4 1 1 0 1 1 1 0 PDGF/VEGF domain Herpes_UL55 PF04537.12 NODE_72688_length_217_cov_1.697802_g64747_i0forward_frame_2 - 0.017 15.1 0.0 0.018 15.1 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL55 protein Herpes_capsid PF06112.11 NODE_72683_length_217_cov_1.730769_g64742_i0forward_frame_2 - 0.17 11.9 0.9 0.21 11.7 0.9 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF1945 PF09178.10 NODE_72682_length_217_cov_1.730769_g64741_i0forward_frame_3 - 0.21 11.8 1.1 22 5.3 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF1945) DUF5409 PF17421.2 NODE_72677_length_217_cov_1.752747_g64736_i0forward_frame_2 - 0.0045 17.7 0.1 0.0055 17.4 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5409) RE_Eco47II PF09553.10 NODE_72677_length_217_cov_1.752747_g64736_i0forward_frame_2 - 0.013 15.1 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Eco47II restriction endonuclease UL45 PF05473.12 NODE_72676_length_217_cov_1.752747_g64735_i0reverse_frame_2 - 0.016 14.8 0.9 0.018 14.7 0.9 1.0 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like NICE-1 PF15845.5 NODE_72675_length_217_cov_1.752747_g64734_i0reverse_frame_3 - 1.6 9.5 7.9 2.5 8.9 7.9 1.6 1 1 0 1 1 1 0 Cysteine-rich C-terminal 1 family DUF3277 PF11681.8 NODE_72673_length_217_cov_1.752747_g64732_i0reverse_frame_2 - 0.073 13.0 0.0 0.081 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3277) PPR_long PF17177.4 NODE_72667_length_217_cov_1.758242_g64726_i0forward_frame_2 - 0.02 14.3 0.3 0.022 14.1 0.3 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP IQ PF00612.27 NODE_72667_length_217_cov_1.758242_g64726_i0forward_frame_2 - 0.04 13.7 0.5 0.13 12.1 0.5 1.9 1 0 0 1 1 1 0 IQ calmodulin-binding motif Ribosomal_L31e PF01198.19 NODE_72667_length_217_cov_1.758242_g64726_i0forward_frame_2 - 0.069 13.4 0.6 0.15 12.3 0.6 1.7 1 1 0 1 1 1 0 Ribosomal protein L31e VHL PF01847.16 NODE_72664_length_217_cov_1.763736_g64723_i0reverse_frame_2 - 0.057 13.3 0.0 0.071 13.0 0.0 1.1 1 0 0 1 1 1 0 VHL beta domain MORN PF02493.20 NODE_72662_length_217_cov_1.818681_g64721_i0reverse_frame_3 - 3.5e-06 26.6 12.2 0.023 14.6 0.9 3.5 3 1 0 3 3 3 3 MORN repeat MSL1_dimer PF16801.5 NODE_72661_length_217_cov_1.818681_g64720_i0forward_frame_2 - 0.012 15.4 0.1 0.019 14.7 0.1 1.2 1 0 0 1 1 1 0 Dimerisation domain of Male-specific-Lethal 1 PKcGMP_CC PF16808.5 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.0024 17.7 1.1 0.0024 17.7 1.1 3.2 2 2 1 3 3 3 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Phlebovirus_NSM PF07246.11 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.007 15.8 9.7 0.0083 15.5 9.7 1.0 1 0 0 1 1 1 1 Phlebovirus nonstructural protein NS-M TMF_DNA_bd PF12329.8 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.015 15.3 17.7 0.46 10.5 5.5 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding ATG16 PF08614.11 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.02 15.1 10.3 0.022 15.0 10.3 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) HR1 PF02185.16 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.023 14.8 3.9 0.023 14.8 3.9 2.0 1 1 1 2 2 2 0 Hr1 repeat Cut12 PF11500.8 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.028 14.4 5.9 0.029 14.3 5.9 1.2 1 0 0 1 1 1 0 Spindle pole body formation-associated protein Rootletin PF15035.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.084 12.9 10.7 0.18 11.8 2.6 2.0 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion DUF641 PF04859.12 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.099 13.0 8.8 1.8 8.9 1.1 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Mod_r PF07200.13 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.11 12.6 11.3 0.11 12.6 11.3 1.0 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein BST2 PF16716.5 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.12 13.0 12.7 0.53 10.9 12.6 1.8 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 DUF4200 PF13863.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.2 12.1 14.7 0.21 12.0 14.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) ZapB PF06005.12 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.21 12.1 11.7 28 5.2 11.7 2.0 1 1 0 1 1 1 0 Cell division protein ZapB DUF724 PF05266.14 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.23 11.3 9.3 0.25 11.2 9.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) BRE1 PF08647.11 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.25 11.4 14.1 4.6 7.4 14.1 2.0 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase MPS2 PF17060.5 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.26 10.5 8.0 0.51 9.6 8.0 1.5 1 1 0 1 1 1 0 Monopolar spindle protein 2 DMPK_coil PF08826.10 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.3 11.2 10.7 4 7.6 0.5 2.1 1 1 1 2 2 2 0 DMPK coiled coil domain like Macoilin PF09726.9 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.42 9.1 9.7 0.46 9.0 9.7 1.0 1 0 0 1 1 1 0 Macoilin family Atg14 PF10186.9 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.5 9.4 11.4 0.52 9.3 11.4 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 OmpH PF03938.14 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.65 10.3 10.9 0.72 10.2 10.9 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Csm1_N PF18504.1 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.68 10.3 14.1 0.89 9.9 3.9 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF4407 PF14362.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.7 9.2 5.5 0.72 9.2 5.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.79 9.5 15.1 5.2 6.9 2.4 2.4 1 1 1 2 2 2 0 Septum formation initiator XRCC4 PF06632.12 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 1.3 7.8 13.9 1.4 7.7 13.9 1.0 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 Spc24 PF08286.11 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 1.4 9.2 10.7 3.1 8.1 4.5 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Cep57_CLD_2 PF14197.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 1.8 8.7 14.4 11 6.2 14.3 2.3 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF4140 PF13600.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 3.2 8.2 7.4 20 5.7 7.4 1.9 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) FapA PF03961.13 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 4.2 5.9 10.9 4.3 5.8 10.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A XhlA PF10779.9 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 5 7.4 11.4 10 6.4 1.7 2.1 1 1 1 2 2 2 0 Haemolysin XhlA TMPIT PF07851.13 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 7 5.8 7.3 7.5 5.7 7.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein TGBp3 PF02495.17 NODE_72653_length_217_cov_1.901099_g64712_i0forward_frame_2 - 0.011 15.3 0.1 0.017 14.8 0.1 1.2 1 0 0 1 1 1 0 Triple gene block 3 DUF1651 PF07864.11 NODE_72652_length_217_cov_1.912088_g64711_i0reverse_frame_3 - 0.092 13.1 0.6 0.23 11.8 0.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1651) Epimerase PF01370.21 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 1.5e-14 54.1 0.0 1.6e-14 54.0 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 1.2e-13 51.1 0.1 1.3e-13 51.1 0.1 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 0.00073 18.8 0.0 0.00079 18.6 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 0.0052 15.8 0.0 0.0052 15.8 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Gp_dh_N PF00044.24 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 0.043 14.2 0.0 0.05 14.0 0.0 1.2 1 1 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RAG2_PHD PF13341.6 NODE_72647_length_217_cov_1.950549_g64706_i0reverse_frame_3 - 0.081 13.0 0.1 0.086 12.9 0.1 1.2 1 0 0 1 1 1 0 RAG2 PHD domain Hydrolase_4 PF12146.8 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 1.9e-12 47.0 0.0 2e-12 46.9 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 6e-05 22.8 0.0 6.1e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Ser_hydrolase PF06821.13 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 0.0011 18.8 0.0 0.0012 18.8 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase Abhydrolase_6 PF12697.7 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 0.0067 17.0 0.0 0.0075 16.9 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 0.065 13.0 0.0 0.071 12.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Laminin_II PF06009.12 NODE_72646_length_217_cov_1.967033_g64705_i0reverse_frame_3 - 0.032 14.3 5.1 0.037 14.0 5.1 1.0 1 0 0 1 1 1 0 Laminin Domain II Med4 PF10018.9 NODE_72646_length_217_cov_1.967033_g64705_i0reverse_frame_3 - 0.036 13.7 2.4 0.037 13.7 2.4 1.0 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Csm1_N PF18504.1 NODE_72646_length_217_cov_1.967033_g64705_i0reverse_frame_3 - 0.12 12.7 4.9 0.16 12.3 4.8 1.3 1 1 0 1 1 1 0 Csm1 N-terminal domain ABC_membrane PF00664.23 NODE_72644_length_217_cov_1.972527_g64703_i0reverse_frame_3 - 0.00049 19.8 0.1 0.00056 19.7 0.1 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region ParB_C PF18064.1 NODE_72644_length_217_cov_1.972527_g64703_i0reverse_frame_3 - 0.16 12.2 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Centromere-binding protein ParB C-terminal He_PIG PF05345.12 NODE_72643_length_217_cov_2.005495_g64702_i0reverse_frame_3 - 6e-05 23.2 6.0 0.00025 21.2 0.5 2.4 3 0 0 3 3 3 2 Putative Ig domain DUF2207 PF09972.9 NODE_72636_length_217_cov_2.071429_g64695_i0reverse_frame_3 - 0.56 8.9 3.7 0.65 8.7 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5442 PF17514.2 NODE_72636_length_217_cov_2.071429_g64695_i0forward_frame_3 - 0.061 13.5 0.1 0.072 13.3 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5442) Kelch_2 PF07646.15 NODE_72635_length_217_cov_2.076923_g64694_i0reverse_frame_3 - 0.017 15.1 0.0 0.47 10.5 0.0 2.1 2 0 0 2 2 2 0 Kelch motif Kelch_1 PF01344.25 NODE_72635_length_217_cov_2.076923_g64694_i0reverse_frame_3 - 0.044 13.4 0.0 0.061 12.9 0.0 1.3 1 0 0 1 1 1 0 Kelch motif BET PF17035.5 NODE_72632_length_217_cov_2.104396_g64691_i0reverse_frame_2 - 0.061 13.5 0.0 0.081 13.1 0.0 1.2 1 0 0 1 1 1 0 Bromodomain extra-terminal - transcription regulation Rdx PF10262.9 NODE_72631_length_217_cov_2.115385_g64690_i0forward_frame_3 - 0.016 15.4 1.0 0.021 15.0 1.0 1.2 1 0 0 1 1 1 0 Rdx family MASE4 PF17158.4 NODE_72630_length_217_cov_2.120879_g64689_i0forward_frame_3 - 2.6e-13 49.8 6.6 2.9e-13 49.6 6.6 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain Lig_chan PF00060.26 NODE_72630_length_217_cov_2.120879_g64689_i0forward_frame_3 - 2.7 7.8 6.1 5.3 6.9 0.1 2.0 1 1 1 2 2 2 0 Ligand-gated ion channel DUF4131 PF13567.6 NODE_72630_length_217_cov_2.120879_g64689_i0forward_frame_3 - 4.2 7.0 5.8 4.4 6.9 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF924 PF06041.11 NODE_72628_length_217_cov_2.120879_g64687_i0forward_frame_2 - 0.014 15.5 0.1 0.016 15.3 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF924) P53_C PF11619.8 NODE_72628_length_217_cov_2.120879_g64687_i0forward_frame_2 - 0.13 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Transcription factor P53 - C terminal domain MG1 PF17790.1 NODE_72623_length_217_cov_2.186813_g64682_i0reverse_frame_2 - 0.033 14.6 0.0 0.037 14.4 0.0 1.0 1 0 0 1 1 1 0 Macroglobulin domain MG1 YjbE PF11106.8 NODE_72618_length_217_cov_2.307692_g64677_i0reverse_frame_3 - 0.0021 18.2 0.3 0.0025 18.0 0.3 1.1 1 0 0 1 1 1 1 Exopolysaccharide production protein YjbE MARVEL PF01284.23 NODE_72618_length_217_cov_2.307692_g64677_i0reverse_frame_3 - 0.032 14.2 0.2 0.038 14.0 0.2 1.0 1 0 0 1 1 1 0 Membrane-associating domain RPN1_RPN2_N PF17781.1 NODE_72617_length_217_cov_2.340659_g64676_i0forward_frame_3 - 0.012 15.0 0.3 0.013 14.9 0.3 1.0 1 0 0 1 1 1 0 RPN1/RPN2 N-terminal domain HALZ PF02183.18 NODE_72617_length_217_cov_2.340659_g64676_i0forward_frame_3 - 0.037 14.3 0.6 0.049 13.9 0.6 1.3 1 0 0 1 1 1 0 Homeobox associated leucine zipper Heliorhodopsin PF18761.1 NODE_72616_length_217_cov_2.368132_g64675_i0forward_frame_2 - 0.061 12.6 0.1 0.066 12.5 0.1 1.1 1 0 0 1 1 1 0 Heliorhodopsin Guanylate_cyc_2 PF09778.9 NODE_72615_length_217_cov_2.373626_g64674_i0forward_frame_3 - 0.057 12.8 0.1 0.058 12.8 0.1 1.0 1 0 0 1 1 1 0 Guanylylate cyclase UPF0556 PF10572.9 NODE_72610_length_217_cov_2.406593_g64669_i0forward_frame_3 - 0.055 13.0 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0556 ANTH PF07651.16 NODE_72610_length_217_cov_2.406593_g64669_i0forward_frame_3 - 0.074 12.0 0.0 0.074 12.0 0.0 1.0 1 0 0 1 1 1 0 ANTH domain Thymidylate_kin PF02223.17 NODE_72609_length_217_cov_2.417582_g64668_i0forward_frame_3 - 4.5e-14 52.5 0.0 4.8e-14 52.5 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase ALG3 PF05208.13 NODE_72606_length_217_cov_2.483516_g64665_i0forward_frame_3 - 8e-10 38.7 3.7 8.5e-10 38.6 3.7 1.0 1 0 0 1 1 1 1 ALG3 protein Babuvirus_MP PF07234.11 NODE_72606_length_217_cov_2.483516_g64665_i0forward_frame_3 - 1.1 9.4 4.2 0.33 11.1 0.7 1.7 1 1 1 2 2 2 0 Movement and RNA silencing protein TSSC4 PF15264.6 NODE_72604_length_217_cov_2.516484_g64663_i0reverse_frame_3 - 0.062 13.6 0.2 0.089 13.0 0.2 1.2 1 0 0 1 1 1 0 Tumour suppressing sub-chromosomal transferable candidate 4 Rhodanese PF00581.20 NODE_72603_length_217_cov_2.521978_g64662_i0reverse_frame_2 - 0.00065 20.2 0.0 0.00076 20.0 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain NP1-WLL PF11733.8 NODE_72599_length_217_cov_2.604396_g64658_i0reverse_frame_2 - 0.061 13.1 0.3 0.066 13.0 0.3 1.0 1 0 0 1 1 1 0 Non-capsid protein NP1 WD40 PF00400.32 NODE_72598_length_217_cov_2.615385_g64657_i0forward_frame_3 - 7.7e-05 23.4 0.1 0.00046 20.9 0.0 2.1 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_72598_length_217_cov_2.615385_g64657_i0forward_frame_3 - 0.002 18.4 0.0 0.0023 18.2 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 NODE_72598_length_217_cov_2.615385_g64657_i0forward_frame_3 - 0.0052 16.2 0.0 0.0061 15.9 0.0 1.1 1 0 0 1 1 1 1 WD40-like domain Cytochrom_D1 PF02239.16 NODE_72598_length_217_cov_2.615385_g64657_i0forward_frame_3 - 0.046 12.2 0.0 0.046 12.2 0.0 1.0 1 0 0 1 1 1 0 Cytochrome D1 heme domain DUF5589 PF17672.1 NODE_72596_length_217_cov_2.626374_g64655_i0reverse_frame_3 - 0.2 11.6 0.0 0.22 11.4 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5589) TOH_N PF12549.8 NODE_72594_length_217_cov_2.681319_g64653_i0forward_frame_3 - 0.64 9.9 0.1 0.64 9.9 0.1 2.0 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal DUF2947 PF11163.8 NODE_72592_length_217_cov_2.747253_g64651_i0reverse_frame_3 - 0.045 13.6 0.1 0.048 13.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2947) PIP5K PF01504.18 NODE_72591_length_217_cov_2.763736_g64650_i0reverse_frame_3 - 0.013 14.7 0.1 0.013 14.7 0.1 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-4-phosphate 5-Kinase RACo_linker PF17650.1 NODE_72586_length_217_cov_2.851648_g64645_i0reverse_frame_2 - 0.036 13.9 0.0 0.043 13.7 0.0 1.1 1 0 0 1 1 1 0 RACo linker region SR-25 PF10500.9 NODE_72585_length_217_cov_2.868132_g64644_i0reverse_frame_3 - 0.53 9.9 5.8 0.57 9.8 5.8 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein ATP1G1_PLM_MAT8 PF02038.16 NODE_72584_length_217_cov_2.868132_g64643_i0reverse_frame_3 - 0.2 11.1 1.4 2.1 7.8 0.1 2.2 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family Sigma70_r4 PF04545.16 NODE_72584_length_217_cov_2.868132_g64643_i0forward_frame_2 - 0.0031 17.0 0.1 0.0067 15.9 0.0 1.6 2 0 0 2 2 2 1 Sigma-70, region 4 Caskin-tail PF16632.5 NODE_72583_length_217_cov_2.961538_g64642_i0reverse_frame_2 - 0.13 12.7 1.9 0.19 12.2 1.9 1.3 1 0 0 1 1 1 0 C-terminal region of Caskin FCH PF00611.23 NODE_72583_length_217_cov_2.961538_g64642_i0forward_frame_2 - 0.013 15.8 0.2 0.33 11.3 0.4 2.0 1 1 1 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain Mtp PF03821.16 NODE_72583_length_217_cov_2.961538_g64642_i0forward_frame_2 - 0.043 13.4 1.2 0.083 12.5 1.2 1.6 1 1 0 1 1 1 0 Golgi 4-transmembrane spanning transporter Kinesin PF00225.23 NODE_72582_length_217_cov_2.961538_g64641_i0forward_frame_2 - 1.5e-26 93.1 0.0 1.6e-26 93.0 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain HlyD_D23 PF16576.5 NODE_72581_length_217_cov_3.016484_g64640_i0reverse_frame_2 - 0.002 17.4 0.0 0.0027 17.0 0.0 1.2 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion VWA_3_C PF18571.1 NODE_72581_length_217_cov_3.016484_g64640_i0reverse_frame_2 - 0.08 12.8 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 von Willebrand factor type A C-terminal domain NAGLU PF05089.12 NODE_72579_length_217_cov_3.098901_g64638_i0reverse_frame_2 - 0.065 12.2 0.0 0.068 12.1 0.0 1.0 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain Pescadillo_N PF06732.11 NODE_72577_length_217_cov_3.247253_g64636_i0forward_frame_2 - 0.01 15.4 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 0 Pescadillo N-terminus DiSB-ORF2_chro PF16506.5 NODE_72576_length_217_cov_3.318681_g64635_i0forward_frame_2 - 0.043 13.8 0.6 0.076 13.0 0.6 1.4 1 0 0 1 1 1 0 Putative virion glycoprotein of insect viruses RCC1 PF00415.18 NODE_72573_length_217_cov_3.340659_g64632_i0forward_frame_3 - 0.15 12.7 0.0 0.21 12.2 0.0 1.2 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat Methyltransf_FA PF12248.8 NODE_72572_length_217_cov_3.351648_g64631_i0forward_frame_2 - 0.074 13.4 0.0 0.1 12.9 0.0 1.3 1 1 0 1 1 1 0 Farnesoic acid 0-methyl transferase BTK PF00779.19 NODE_72570_length_217_cov_3.461538_g64629_i0reverse_frame_3 - 0.048 13.5 0.2 0.048 13.5 0.2 2.1 2 0 0 2 2 2 0 BTK motif Methyltransf_25 PF13649.6 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 1.9e-10 41.3 0.2 2.9e-10 40.7 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 1.1e-08 35.0 0.1 1.3e-08 34.7 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 7e-08 32.5 0.0 7.9e-08 32.3 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 1e-06 29.3 0.1 1.8e-06 28.5 0.1 1.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 1.9e-05 25.3 0.1 2.4e-05 25.0 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 5.7e-05 22.6 0.1 6e-05 22.5 0.1 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_15 PF09445.10 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.00015 21.4 0.0 0.00016 21.3 0.0 1.0 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_18 PF12847.7 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.00023 21.1 0.0 0.00026 20.9 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.00025 20.7 0.1 0.00025 20.7 0.1 1.0 1 0 0 1 1 1 1 Methyltransferase small domain TPMT PF05724.11 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.0016 18.2 0.0 0.0016 18.2 0.0 1.0 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) DREV PF05219.12 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.0026 16.9 0.0 0.0027 16.8 0.0 1.0 1 0 0 1 1 1 1 DREV methyltransferase CMAS PF02353.20 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.0033 16.8 0.1 0.0036 16.6 0.1 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.0094 15.9 0.0 0.0098 15.9 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain UDPG_MGDP_dh_N PF03721.14 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.014 15.0 0.0 0.016 14.7 0.0 1.1 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.088 12.7 0.1 0.095 12.6 0.1 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH_RFF PF18321.1 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.094 13.2 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LEM PF03020.15 NODE_72569_length_217_cov_3.472527_g64628_i0forward_frame_2 - 0.34 10.5 0.5 0.59 9.7 0.1 1.5 1 1 0 1 1 1 0 LEM domain DUF2430 PF10353.9 NODE_72567_length_217_cov_3.736264_g64626_i0reverse_frame_3 - 0.35 11.3 4.3 1.9 8.9 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2430) NADHdh PF00146.21 NODE_72565_length_217_cov_4.043956_g64624_i0reverse_frame_2 - 2.5e-06 27.0 0.1 2.5e-06 27.0 0.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DAP10 PF07213.11 NODE_72565_length_217_cov_4.043956_g64624_i0forward_frame_2 - 0.43 10.6 2.8 1.4 8.9 0.4 2.0 1 1 1 2 2 2 0 DAP10 membrane protein BCMA-Tall_bind PF09257.10 NODE_72564_length_217_cov_4.324176_g64623_i0forward_frame_2 - 0.0079 16.3 0.7 0.02 15.0 0.7 1.7 1 0 0 1 1 1 1 BCMA, TALL-1 binding PAS_6 PF08348.11 NODE_72563_length_217_cov_4.950549_g64622_i0reverse_frame_3 - 0.1 12.5 0.3 0.19 11.6 0.3 1.5 1 1 0 1 1 1 0 YheO-like PAS domain PsiB PF06290.11 NODE_72562_length_217_cov_5.351648_g64621_i0forward_frame_2 - 0.11 12.0 0.1 0.13 11.7 0.1 1.1 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) RuBisCO_large_N PF02788.16 NODE_72560_length_217_cov_5.824176_g64619_i0reverse_frame_3 - 3.8e-19 69.0 0.1 4.2e-19 68.9 0.1 1.0 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain HP1451_C PF18472.1 NODE_72559_length_217_cov_8.906593_g64618_i0forward_frame_2 - 0.091 12.8 0.0 0.097 12.7 0.0 1.3 1 0 0 1 1 1 0 HP1451 C-terminal domain LacY_symp PF01306.19 NODE_72557_length_217_cov_22.285714_g64616_i0reverse_frame_2 - 0.13 11.0 0.6 0.14 10.9 0.6 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter PAN_4 PF14295.6 NODE_72549_length_217_cov_30.186813_g64608_i0forward_frame_3 - 0.04 13.8 0.4 0.055 13.4 0.4 1.2 1 0 0 1 1 1 0 PAN domain CLN3 PF02487.17 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 2.4 7.1 6.9 2.4 7.1 6.9 1.0 1 0 0 1 1 1 0 CLN3 protein Connexin PF00029.19 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 3.8 7.2 13.1 3.9 7.2 13.1 1.1 1 0 0 1 1 1 0 Connexin CobT PF06213.12 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 4.1 6.7 12.1 4.3 6.7 12.1 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Coilin_N PF15862.5 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 4.6 7.0 25.4 6.9 6.5 25.4 1.2 1 0 0 1 1 1 0 Coilin N-terminus DUF4228 PF14009.6 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 4.9 7.5 10.4 5.5 7.3 10.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4228) Afi1 PF07792.12 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 7 7.1 14.7 8 7.0 14.7 1.1 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking Zip PF02535.22 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 7.8 5.6 10.1 8.1 5.6 10.1 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF2201_N PF13203.6 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 8.5 5.9 8.7 9.5 5.7 8.7 1.0 1 0 0 1 1 1 0 Putative metallopeptidase domain MTHFR_C PF12225.8 NODE_72545_length_217_cov_34.697802_g64604_i0reverse_frame_2 - 0.0068 16.0 1.2 0.0081 15.8 1.2 1.2 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal PknG_rubred PF16919.5 NODE_72545_length_217_cov_34.697802_g64604_i0forward_frame_3 - 0.062 13.5 1.9 0.082 13.1 1.9 1.1 1 0 0 1 1 1 0 Protein kinase G rubredoxin domain SR-25 PF10500.9 NODE_72543_length_217_cov_37.609890_g64602_i0forward_frame_3 - 0.052 13.1 1.8 0.057 13.0 1.8 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein 2OG-FeII_Oxy_3 PF13640.6 NODE_72543_length_217_cov_37.609890_g64602_i0forward_frame_2 - 0.041 14.8 0.0 0.059 14.3 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily SAD_SRA PF02182.17 NODE_72540_length_217_cov_39.252747_g64599_i0reverse_frame_3 - 0.27 10.9 5.6 0.29 10.8 5.6 1.1 1 0 0 1 1 1 0 SAD/SRA domain ERG2_Sigma1R PF04622.12 NODE_72540_length_217_cov_39.252747_g64599_i0reverse_frame_3 - 0.28 10.5 2.8 0.32 10.3 2.8 1.0 1 0 0 1 1 1 0 ERG2 and Sigma1 receptor like protein DUF4775 PF16001.5 NODE_72540_length_217_cov_39.252747_g64599_i0reverse_frame_3 - 7.3 5.9 18.1 8.3 5.7 18.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4775) Psu PF07455.11 NODE_72536_length_217_cov_40.934066_g64595_i0reverse_frame_3 - 0.087 12.4 0.0 0.091 12.3 0.0 1.1 1 0 0 1 1 1 0 Phage polarity suppression protein (Psu) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks339.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks339.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks339.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks339.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:22:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase_Tyr PF07714.17 ORF68383 - 7.2e-51 172.9 0.0 8.9e-51 172.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF68383 - 1.6e-47 162.1 0.0 2.1e-47 161.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF68383 - 0.013 14.9 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Neuropep_like PF15161.6 ORF68383 - 0.033 13.9 0.2 0.079 12.6 0.2 1.6 1 0 0 1 1 1 0 Neuropeptide-like TFIIA PF03153.13 ORF68148 - 0.63 10.0 9.4 0.79 9.7 9.4 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Spt20 PF12090.8 ORF68148 - 2.3 7.8 11.2 3.8 7.0 11.2 1.3 1 0 0 1 1 1 0 Spt20 family PAS_9 PF13426.7 ORF65627 - 4.5e-11 42.9 0.0 1.4e-10 41.3 0.0 1.7 2 0 0 2 2 2 1 PAS domain PAS_3 PF08447.12 ORF65627 - 1.1e-05 25.6 0.0 2.9e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS PF00989.25 ORF65627 - 0.018 15.0 0.0 0.042 13.9 0.0 1.5 1 0 0 1 1 1 0 PAS fold Aldo_ket_red PF00248.21 ORF65072 - 7.8e-62 209.1 0.0 9.9e-62 208.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Spc7 PF08317.11 ORF64607 - 0.0059 15.5 31.0 0.063 12.1 11.7 2.4 1 1 1 2 2 2 2 Spc7 kinetochore protein Fib_alpha PF08702.10 ORF64607 - 0.029 14.6 1.4 0.029 14.6 1.4 3.1 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family zf-C2H2_2 PF12756.7 ORF64607 - 0.077 13.3 6.2 0.12 12.7 0.6 2.5 2 0 0 2 2 2 0 C2H2 type zinc-finger (2 copies) UCH PF00443.29 ORF64607 - 0.083 12.4 0.4 0.19 11.2 0.4 1.9 1 1 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase QueF PF14489.6 ORF64607 - 0.087 13.0 0.6 0.23 11.7 0.1 2.1 2 1 0 2 2 2 0 QueF-like protein DUF4413 PF14372.6 ORF64607 - 0.12 12.7 0.5 5.7 7.4 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4413) SseC PF04888.12 ORF64607 - 0.31 10.6 9.7 0.24 11.0 8.6 1.4 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family HAP1_N PF04849.13 ORF64607 - 1.9 7.6 34.5 0.21 10.8 24.8 2.8 1 1 2 3 3 3 0 HAP1 N-terminal conserved region CENP-F_leu_zip PF10473.9 ORF64607 - 4.4 7.3 35.1 0.15 12.1 17.5 3.3 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1835 PF08874.10 ORF64607 - 6.4 7.0 8.7 4.8 7.4 4.5 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1835) HalX PF08663.10 ORF64607 - 7.3 7.0 14.0 0.83 10.0 3.6 3.4 3 0 0 3 3 3 0 HalX domain Filament PF00038.21 ORF64607 - 7.8 6.0 38.0 96 2.4 37.8 2.4 1 1 0 1 1 1 0 Intermediate filament protein DnaJ_C PF01556.18 ORF63745 - 1.9e-30 105.9 0.0 2.4e-30 105.6 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 ORF63745 - 1.6e-10 41.0 0.8 8.5e-10 38.6 0.3 2.1 2 0 0 2 2 2 1 DnaJ domain Radial_spoke PF04712.12 ORF59136 - 1.5e-81 274.8 0.3 1.3e-60 205.8 0.2 2.0 1 1 1 2 2 2 2 Radial spokehead-like protein NDK PF00334.19 ORF55845 - 4.2e-70 234.0 0.0 1e-41 142.1 0.0 2.1 2 0 0 2 2 2 2 Nucleoside diphosphate kinase DUF1126 PF06565.12 ORF55845 - 0.00089 19.1 0.7 0.0041 16.9 0.7 2.0 1 1 0 1 1 1 1 DUF1126 PH-like domain Pox_VLTF3 PF04947.14 ORF55845 - 0.0096 15.7 0.0 0.026 14.3 0.0 1.6 1 0 0 1 1 1 1 Poxvirus Late Transcription Factor VLTF3 like DUF4494 PF14902.6 ORF55845 - 0.023 14.6 0.2 0.04 13.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4494) DUF5408 PF17402.2 ORF40982 - 0.046 13.6 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5408) Enkurin PF13864.6 ORF31683 - 0.011 16.1 9.5 0.12 12.8 1.7 3.4 3 0 0 3 3 3 0 Calmodulin-binding HALZ PF02183.18 ORF31683 - 0.57 10.4 11.4 0.26 11.5 0.6 4.0 3 1 0 3 3 3 0 Homeobox associated leucine zipper Cep57_MT_bd PF06657.13 ORF31683 - 0.92 10.0 13.0 1.5 9.3 0.3 3.3 3 0 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 BST2 PF16716.5 ORF31683 - 4.2 8.0 13.9 7.8 7.2 6.9 2.8 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 YabA PF06156.13 ORF31683 - 6.6 7.4 14.0 0.27 11.9 1.2 2.8 2 1 0 2 2 2 0 Initiation control protein YabA Enkurin PF13864.6 ORF30322 - 0.011 16.1 9.5 0.12 12.8 1.7 3.4 3 0 0 3 3 3 0 Calmodulin-binding HALZ PF02183.18 ORF30322 - 0.57 10.4 11.4 0.26 11.5 0.6 4.0 3 1 0 3 3 3 0 Homeobox associated leucine zipper Cep57_MT_bd PF06657.13 ORF30322 - 0.92 10.0 13.0 1.5 9.3 0.3 3.3 3 0 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 BST2 PF16716.5 ORF30322 - 4.2 8.0 13.9 7.8 7.2 6.9 2.8 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 YabA PF06156.13 ORF30322 - 6.6 7.4 14.0 0.27 11.9 1.2 2.8 2 1 0 2 2 2 0 Initiation control protein YabA Enkurin PF13864.6 ORF2832 - 0.011 16.1 9.5 0.12 12.8 1.7 3.4 3 0 0 3 3 3 0 Calmodulin-binding HALZ PF02183.18 ORF2832 - 0.57 10.4 11.4 0.26 11.5 0.6 4.0 3 1 0 3 3 3 0 Homeobox associated leucine zipper Cep57_MT_bd PF06657.13 ORF2832 - 0.92 10.0 13.0 1.5 9.3 0.3 3.3 3 0 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 BST2 PF16716.5 ORF2832 - 4.2 8.0 13.9 7.8 7.2 6.9 2.8 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 YabA PF06156.13 ORF2832 - 6.6 7.4 14.0 0.27 11.9 1.2 2.8 2 1 0 2 2 2 0 Initiation control protein YabA Ish1 PF10281.9 ORF25793 - 0.019 15.3 0.3 0.078 13.3 0.0 2.1 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein Armet PF10208.9 ORF25793 - 0.046 13.6 0.0 0.075 13.0 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding Neur_chan_LBD PF02931.23 ORF21657 - 0.019 14.4 0.5 0.042 13.3 0.5 1.5 1 1 0 1 1 1 0 Neurotransmitter-gated ion-channel ligand binding domain Oxidored_q4 PF00507.19 ORF21657 - 2.9 8.1 7.2 0.12 12.5 0.6 2.0 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Sulfate_transp PF00916.20 ORF20215 - 2e-11 43.3 0.2 3.8e-11 42.4 0.0 1.4 2 0 0 2 2 2 1 Sulfate permease family Xan_ur_permease PF00860.20 ORF20215 - 0.0092 14.7 0.2 0.0092 14.7 0.2 2.2 1 1 1 2 2 2 1 Permease family STAS PF01740.21 ORF20215 - 0.09 12.4 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 STAS domain p450 PF00067.22 ORF18224 - 2.7e-49 168.2 2.8 3.8e-49 167.7 2.8 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF3135 PF11333.8 ORF18224 - 0.086 13.1 0.1 0.17 12.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) Colicin_immun PF09204.10 ORF18224 - 6 7.5 12.2 1.8 9.1 1.0 3.9 3 1 1 4 4 4 0 Bacterial self-protective colicin-like immunity DHHC PF01529.20 ORF15497 - 2.5e-30 105.3 12.6 2.5e-30 105.3 12.6 2.2 2 0 0 2 2 2 1 DHHC palmitoyltransferase Ish1 PF10281.9 ORF14197 - 0.019 15.3 0.3 0.078 13.3 0.0 2.1 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein Armet PF10208.9 ORF14197 - 0.046 13.6 0.0 0.075 13.0 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding P2_N PF18628.1 ORF109249 - 0.048 13.4 0.1 0.11 12.2 0.1 1.6 1 0 0 1 1 1 0 Viral coat protein P2 N-terminal domain EamA PF00892.20 ORF108027 - 3e-13 50.1 28.6 9.9e-07 29.0 9.1 2.1 2 0 0 2 2 2 2 EamA-like transporter family Pkinase PF00069.25 ORF106442 - 1.3e-38 132.9 0.2 2.1e-38 132.2 0.2 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF106442 - 1.1e-27 96.9 0.0 1.8e-27 96.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF106442 - 2e-06 27.4 0.0 2.8e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF106442 - 2.9e-05 23.0 0.7 0.00048 19.0 0.0 2.1 2 0 0 2 2 2 2 Fungal protein kinase TPR_16 PF13432.6 ORF100304 - 0.00091 19.8 7.0 0.0033 18.0 1.8 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF100304 - 0.0016 18.4 5.0 1.1 9.5 0.4 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF100304 - 0.002 17.8 0.7 2.9 7.9 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat P_C10 PF14974.6 ORF100304 - 0.029 14.5 0.0 0.065 13.3 0.0 1.6 1 0 0 1 1 1 0 Protein C10 GvpO PF05800.11 ORF100304 - 0.038 14.0 0.0 0.13 12.3 0.0 2.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpO DUF4028 PF13220.6 ORF100304 - 0.1 12.4 0.0 0.35 10.7 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) MH1 PF03165.16 NODE_15811_length_1117_cov_3.851201_g11967_i0forward_frame_2 - 0.028 14.6 1.0 0.061 13.5 1.0 1.5 1 0 0 1 1 1 0 MH1 domain Pkinase PF00069.25 ORF92113 - 3.4e-23 82.3 0.0 7.7e-23 81.2 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92113 - 2e-06 27.3 0.0 3.5e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF92113 - 0.003 16.9 0.0 0.0054 16.1 0.0 1.4 1 0 0 1 1 1 1 Kinase-like IMS_C PF11799.8 ORF89264 - 1.9e-08 35.0 0.1 8.3e-08 32.9 0.0 1.9 2 0 0 2 2 2 1 impB/mucB/samB family C-terminal domain IMS PF00817.20 ORF89264 - 7.3e-07 29.3 0.0 1.5e-06 28.2 0.0 1.6 1 0 0 1 1 1 1 impB/mucB/samB family IMS_HHH PF11798.8 ORF89264 - 0.002 18.4 0.0 0.0038 17.5 0.0 1.5 1 0 0 1 1 1 1 IMS family HHH motif YhfH PF14149.6 ORF89264 - 0.037 14.0 0.2 1 9.4 0.0 2.5 2 0 0 2 2 2 0 YhfH-like protein Rad50_zn_hook PF04423.14 ORF89264 - 0.042 13.7 1.7 1.3 8.9 0.1 2.6 2 0 0 2 2 2 0 Rad50 zinc hook motif PRP21_like_P PF12230.8 ORF89264 - 0.13 12.2 0.1 0.36 10.7 0.0 1.6 1 1 0 1 1 1 0 Pre-mRNA splicing factor PRP21 like protein Ank_2 PF12796.7 ORF84457 - 3.6e-30 104.4 7.9 1e-09 38.9 0.3 3.6 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF84457 - 4.4e-20 71.8 1.6 6.8e-06 26.5 0.1 5.9 2 2 4 6 6 6 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF84457 - 7.6e-15 53.5 4.0 0.31 11.7 0.1 6.8 6 0 0 6 6 6 4 Ankyrin repeat Ank PF00023.30 ORF84457 - 9.7e-14 51.1 11.0 0.22 12.0 0.0 7.4 7 1 0 7 7 7 5 Ankyrin repeat Ank_5 PF13857.6 ORF84457 - 1.5e-12 47.5 5.3 0.00077 19.7 0.0 4.8 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Exo_endo_phos PF03372.23 ORF75894 - 0.0094 15.5 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family bZIP_2 PF07716.15 ORF75183 - 0.035 14.2 1.4 0.035 14.2 1.4 4.9 4 3 2 6 6 6 0 Basic region leucine zipper NPV_P10 PF05531.12 ORF75183 - 0.13 12.8 16.1 1.6 9.3 1.0 4.0 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein IFT57 PF10498.9 ORF75183 - 0.35 9.8 29.0 0.4 9.6 11.5 2.1 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 DUF4201 PF13870.6 ORF75183 - 3 7.6 35.4 0.46 10.2 22.2 3.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) APG6_N PF17675.1 ORF75183 - 3.2 8.3 49.5 3 8.4 21.7 3.3 1 1 2 3 3 3 0 Apg6 coiled-coil region Fez1 PF06818.15 ORF75183 - 4.4 7.7 36.1 15 6.0 16.6 2.3 1 1 1 2 2 2 0 Fez1 GAS PF13851.6 ORF75183 - 4.4 6.6 42.7 0.032 13.6 25.3 2.7 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding Oxidored_q6 PF01058.22 ORF72715 - 2.4e-32 111.5 1.4 3.5e-32 111.0 0.8 1.6 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.6 ORF72715 - 8.6e-27 93.3 8.4 1.3e-26 92.7 5.7 2.1 2 0 0 2 2 2 1 NiFe/NiFeSe hydrogenase small subunit C-terminal TAT_signal PF10518.9 ORF72715 - 0.00031 20.5 2.6 0.00031 20.5 2.6 3.6 3 1 1 4 4 4 1 TAT (twin-arginine translocation) pathway signal sequence IU_nuc_hydro PF01156.19 ORF70618 - 8.8e-39 133.9 0.0 1.1e-38 133.5 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase Glyco_transf_8 PF01501.20 ORF70225 - 0.062 12.8 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 8 Ntox1 PF15500.6 ORF69392 - 0.069 13.5 0.0 0.19 12.1 0.0 1.7 1 0 0 1 1 1 0 Putative RNase-like toxin, toxin_1 DUF268 PF03269.14 ORF59965 - 0.037 13.9 1.5 0.45 10.4 0.1 2.5 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF268 DUF4349 PF14257.6 ORF59965 - 0.067 12.6 2.1 0.13 11.7 2.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) APG6_N PF17675.1 ORF59965 - 0.88 10.1 17.3 2.5 8.6 17.3 1.8 1 0 0 1 1 1 0 Apg6 coiled-coil region ERM PF00769.19 ORF59965 - 2.5 7.8 29.8 16 5.2 29.8 2.1 1 1 0 1 1 1 0 Ezrin/radixin/moesin family CREPT PF16566.5 ORF59965 - 4.4 7.5 17.4 0.9 9.7 13.3 2.0 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Peripla_BP_6 PF13458.6 ORF59780 - 7.7e-56 190.2 6.7 9.1e-56 190.0 6.7 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 ORF59780 - 4.5e-26 91.8 0.0 8.6e-26 90.9 0.0 1.4 1 1 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 ORF59780 - 1.1e-18 67.5 0.1 1.3e-18 67.2 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain PGM_PMM_I PF02878.16 ORF59780 - 0.0044 16.7 0.2 0.42 10.3 0.0 2.4 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Fe-ADH PF00465.19 ORF59780 - 0.0049 15.7 0.0 0.0087 14.9 0.0 1.3 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase V_ATPase_I PF01496.19 ORF57165 - 2 6.2 3.0 2.5 5.9 3.0 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CREPT PF16566.5 ORF57165 - 3.2 7.9 10.1 4.3 7.5 7.9 2.1 1 1 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour DUF2599 PF10783.9 ORF54531 - 0.1 13.3 0.1 0.26 12.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2599) Peptidase_C1 PF00112.23 ORF51032 - 1.7e-55 188.4 5.0 2.8e-55 187.8 5.0 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF51032 - 3.4e-13 49.8 7.2 3.4e-13 49.8 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Pkinase PF00069.25 ORF432 - 1.2e-52 178.9 0.4 2.1e-52 178.1 0.4 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF432 - 7.1e-25 87.7 0.0 1.2e-24 87.0 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF432 - 8.8e-06 25.2 0.0 1.3e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF432 - 0.0069 15.4 0.4 0.42 9.5 0.0 2.3 2 0 0 2 2 2 2 Haspin like kinase domain Kdo PF06293.14 ORF432 - 0.0078 15.6 0.0 0.021 14.2 0.0 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF432 - 0.12 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family CD45 PF12567.8 ORF432 - 0.8 9.7 4.8 6.3 6.8 2.3 2.5 2 0 0 2 2 2 0 Leukocyte receptor CD45 UL97 PF06734.12 ORF42841 - 0.061 13.2 0.1 0.097 12.6 0.1 1.4 1 0 0 1 1 1 0 UL97 RR_TM4-6 PF06459.12 ORF42841 - 5 6.9 14.6 0.16 11.7 6.9 1.9 2 0 0 2 2 2 0 Ryanodine Receptor TM 4-6 Atg14 PF10186.9 ORF42841 - 8.6 5.3 10.2 14 4.6 10.2 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Pkinase PF00069.25 ORF41431 - 2.8e-22 79.3 0.0 5.2e-22 78.5 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Myosin_TH1 PF06017.13 ORF41431 - 1.7e-15 57.2 1.8 2.1e-15 56.9 1.0 1.6 2 0 0 2 2 2 1 Unconventional myosin tail, actin- and lipid-binding Pkinase_Tyr PF07714.17 ORF41431 - 3.5e-11 42.9 0.1 8.4e-11 41.6 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase DUF1614 PF07758.11 ORF41431 - 0.12 12.3 0.1 0.22 11.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1614) Plant_all_beta PF10532.9 ORF41431 - 0.17 12.2 3.1 1 9.6 2.9 2.5 2 1 0 2 2 2 0 Plant specific N-all beta domain Fer4 PF00037.27 ORF39496 - 5.7 6.9 47.4 0.67 9.9 0.8 9.1 8 0 0 8 8 8 0 4Fe-4S binding domain Iso_dh PF00180.20 ORF38803 - 1.8e-59 201.7 0.0 4.4e-59 200.4 0.0 1.6 1 1 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Gly-zipper_Omp PF13488.6 ORF38803 - 2.5 8.2 7.9 4.4 7.4 7.9 1.3 1 0 0 1 1 1 0 Glycine zipper Fer4 PF00037.27 ORF3811 - 5.7 6.9 47.4 0.67 9.9 0.8 9.1 8 0 0 8 8 8 0 4Fe-4S binding domain RCC1_2 PF13540.6 ORF34589 - 1.1e-21 76.0 26.9 0.00038 20.2 0.1 9.4 9 0 0 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF34589 - 0.011 15.7 3.5 13 5.7 0.1 4.5 2 1 2 5 5 5 0 Lipocalin / cytosolic fatty-acid binding protein family MgrB PF13998.6 ORF108567 - 0.046 13.6 1.0 6.4 6.7 0.0 2.5 2 0 0 2 2 2 0 MgrB protein Zn_ribbon_2 PF12674.7 NODE_15889_length_1114_cov_4.010195_g12033_i0forward_frame_3 - 0.094 13.4 2.6 0.59 10.8 2.6 2.4 1 0 0 1 1 1 0 Putative zinc ribbon domain He_PIG PF05345.12 ORF94989 - 5.9e-06 26.4 11.5 0.00013 22.0 7.2 3.0 2 0 0 2 2 2 2 Putative Ig domain DUF4834 PF16118.5 ORF94989 - 0.05 14.6 0.1 0.16 12.9 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) PMP1_2 PF08114.11 ORF94989 - 0.079 12.7 2.4 0.14 11.9 2.4 1.4 1 0 0 1 1 1 0 ATPase proteolipid family DUF2681 PF10883.8 ORF94989 - 0.086 13.3 0.1 0.17 12.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) Chordopox_A13L PF05961.11 ORF94989 - 0.14 12.4 2.1 0.55 10.5 2.1 2.0 1 1 0 1 1 1 0 Chordopoxvirus A13L protein TMEM154 PF15102.6 ORF94989 - 4.6 7.1 14.1 0.049 13.5 5.3 2.2 2 1 0 2 2 2 0 TMEM154 protein family KH_1 PF00013.29 ORF94566 - 3.2e-14 52.5 0.1 5e-09 35.9 0.0 3.3 3 0 0 3 3 3 3 KH domain KH_4 PF13083.6 ORF94566 - 0.014 15.2 0.1 0.067 13.1 0.0 2.2 2 1 0 2 2 2 0 KH domain KH_2 PF07650.17 ORF94566 - 0.34 10.8 3.0 2.3 8.1 0.1 2.6 1 1 1 2 2 2 0 KH domain Melibiase_2 PF16499.5 ORF945 - 1.1e-16 60.8 1.2 2e-16 60.0 1.2 1.3 1 1 0 1 1 1 1 Alpha galactosidase A Melibiase_C PF17801.1 ORF945 - 2e-08 34.2 0.0 6.1e-08 32.6 0.0 1.8 2 0 0 2 2 2 1 Alpha galactosidase C-terminal beta sandwich domain DUF4404 PF14357.6 ORF94380 - 0.035 14.7 0.0 0.07 13.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) KH_5 PF13184.6 ORF91722 - 2.2e-29 101.3 2.9 1.1e-27 95.9 0.2 2.8 3 0 0 3 3 3 1 NusA-like KH domain HHH_5 PF14520.6 ORF91722 - 1e-14 54.9 4.2 1.2e-09 38.6 0.4 3.2 3 1 1 4 4 4 2 Helix-hairpin-helix domain S1 PF00575.23 ORF91722 - 4.2e-05 23.8 0.1 0.00011 22.4 0.1 1.8 1 0 0 1 1 1 1 S1 RNA binding domain KH_2 PF07650.17 ORF91722 - 0.0014 18.4 0.2 0.018 14.8 0.0 2.5 2 0 0 2 2 2 1 KH domain DUF4332 PF14229.6 ORF91722 - 0.0019 18.4 0.1 1.4 9.2 0.1 2.6 1 1 0 2 2 2 2 Domain of unknown function (DUF4332) DNA_pol_lambd_f PF10391.9 ORF91722 - 0.015 15.1 0.0 2.1 8.2 0.0 3.2 3 0 0 3 3 3 0 Fingers domain of DNA polymerase lambda KH_4 PF13083.6 ORF91722 - 0.045 13.6 0.1 0.2 11.6 0.0 2.1 2 0 0 2 2 2 0 KH domain AAA_14 PF13173.6 ORF89116 - 0.027 14.5 1.2 0.027 14.5 1.2 2.1 2 0 0 2 2 2 0 AAA domain Rotamase_2 PF13145.6 ORF89116 - 0.035 14.9 2.3 1.5 9.7 0.2 2.5 2 1 0 2 2 2 0 PPIC-type PPIASE domain Angiomotin_C PF12240.8 ORF89116 - 0.054 13.0 2.7 0.094 12.3 0.6 2.3 2 1 0 2 2 2 0 Angiomotin C terminal NTP_transf_9 PF04248.12 ORF89116 - 0.082 12.8 0.2 2 8.3 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF427) Tup_N PF08581.10 ORF89116 - 2.3 8.6 6.9 3.2 8.1 3.3 3.0 2 1 1 3 3 3 0 Tup N-terminal DUF445 PF04286.12 ORF89116 - 4.5 7.0 11.3 1.2 8.9 7.9 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF445) MtN3_slv PF03083.16 ORF84615 - 9.2e-15 54.5 12.1 3.6e-08 33.3 1.3 2.4 2 0 0 2 2 2 2 Sugar efflux transporter for intercellular exchange Pkinase_Tyr PF07714.17 ORF7645 - 3.3e-45 154.4 0.0 4.9e-45 153.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF7645 - 3.1e-41 141.5 0.0 4.4e-41 141.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 ORF7645 - 0.029 13.7 0.0 0.051 12.9 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF7645 - 0.12 11.7 0.0 0.22 10.8 0.0 1.4 1 1 0 1 1 1 0 Kinase-like CNOT1_TTP_bind PF16417.5 ORF71578 - 0.049 12.8 0.0 0.12 11.6 0.0 1.5 2 0 0 2 2 2 0 CCR4-NOT transcription complex subunit 1 TTP binding domain ABC_tran PF00005.27 ORF54134 - 4.3e-28 98.5 1.1 8.6e-22 78.1 0.0 3.0 3 0 0 3 3 3 2 ABC transporter ABC_tran_Xtn PF12848.7 ORF54134 - 8.4e-21 73.8 2.1 1.3e-20 73.2 2.1 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF54134 - 3.3e-13 50.1 4.9 2.7e-05 24.1 0.0 3.3 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF54134 - 2.9e-09 36.7 0.5 4.1e-05 23.1 0.0 3.3 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF54134 - 2.1e-05 24.1 0.3 6e-05 22.7 0.1 1.9 2 0 0 2 2 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 ORF54134 - 0.00072 19.7 0.2 0.041 14.1 0.0 2.9 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 ORF54134 - 0.0019 18.7 0.7 0.045 14.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.17 ORF54134 - 0.0026 17.9 0.3 0.019 15.0 0.0 2.1 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_30 PF13604.6 ORF54134 - 0.0031 17.2 0.0 0.0067 16.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 ORF54134 - 0.012 14.6 0.6 0.062 12.3 0.0 2.3 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 ORF54134 - 0.028 14.8 0.1 0.11 12.9 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 ORF54134 - 0.045 14.3 0.1 0.23 12.0 0.0 2.2 3 0 0 3 3 2 0 AAA domain OMS28_porin PF03532.13 ORF54134 - 0.05 12.8 0.1 0.078 12.2 0.1 1.3 1 0 0 1 1 1 0 OMS28 porin MMR_HSR1 PF01926.23 ORF54134 - 0.079 13.0 1.2 0.12 12.4 0.1 1.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase Arf PF00025.21 ORF54134 - 0.08 12.4 0.8 0.61 9.5 0.0 2.2 2 0 0 2 2 2 0 ADP-ribosylation factor family DUF3584 PF12128.8 ORF54134 - 0.082 10.4 0.1 0.082 10.4 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) RsgA_GTPase PF03193.16 ORF54134 - 0.096 12.6 0.2 0.35 10.8 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase Zeta_toxin PF06414.12 ORF54134 - 0.11 11.7 1.5 0.71 9.1 0.1 2.2 2 0 0 2 2 2 0 Zeta toxin RNA_helicase PF00910.22 ORF54134 - 0.17 12.2 0.1 2.1 8.8 0.0 2.5 3 0 0 3 3 3 0 RNA helicase DUF815 PF05673.13 ORF54134 - 0.21 10.7 0.7 3.7 6.7 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF815) Sulfotransfer_2 PF03567.14 ORF52978 - 2.7e-11 43.9 0.1 3.8e-11 43.4 0.1 1.3 1 0 0 1 1 1 1 Sulfotransferase family DUF4123 PF13503.6 ORF52978 - 0.015 15.7 6.0 0.14 12.5 0.1 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF4123) DUF3556 PF12077.8 ORF43995 - 6.7e-25 87.6 0.4 8.3e-25 87.2 0.4 1.1 1 0 0 1 1 1 1 Transmembrane protein of unknown function (DUF3556) Bombolitin PF08096.11 ORF43995 - 0.15 12.4 1.2 0.5 10.7 1.2 1.9 1 0 0 1 1 1 0 Bombolitin family ChAPs PF09295.10 ORF42321 - 7.4e-08 31.8 0.6 1.5e-07 30.8 0.3 1.6 2 0 0 2 2 2 1 ChAPs (Chs5p-Arf1p-binding proteins) Thrombin_light PF09396.10 ORF39049 - 0.12 12.1 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Thrombin light chain PARP PF00644.20 ORF31307 - 7.4e-10 38.7 0.0 1.6e-09 37.7 0.0 1.6 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain WWE PF02825.20 ORF31307 - 3.5e-05 24.3 0.0 9.9e-05 22.9 0.0 1.8 1 0 0 1 1 1 1 WWE domain TMF_TATA_bd PF12325.8 ORF31307 - 0.062 13.5 3.0 0.11 12.7 3.0 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DUF349 PF03993.12 ORF31307 - 0.25 11.7 2.9 0.52 10.6 2.9 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF349) DivIC PF04977.15 ORF31307 - 0.63 9.8 5.1 0.35 10.7 0.9 2.5 2 1 1 3 3 3 0 Septum formation initiator Ammonium_transp PF00909.21 ORF24394 - 2.3e-28 99.0 11.4 2.8e-28 98.7 11.4 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family FAST_1 PF06743.15 ORF21098 - 0.068 13.1 0.0 1.8 8.6 0.0 3.1 4 1 1 5 5 5 0 FAST kinase-like protein, subdomain 1 APG6_N PF17675.1 ORF20606 - 0.00033 21.2 4.8 0.00033 21.2 4.8 4.5 1 1 2 3 3 3 1 Apg6 coiled-coil region ATG16 PF08614.11 ORF20606 - 1.9 8.7 56.6 0.31 11.2 17.6 4.0 2 2 2 4 4 4 0 Autophagy protein 16 (ATG16) DUF1664 PF07889.12 ORF20606 - 2.7 8.1 12.7 2.9 8.0 0.2 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 ORF20606 - 9.5 5.0 35.4 0.27 10.1 12.4 3.1 2 1 0 2 2 2 0 Spc7 kinetochore protein Cortex-I_coil PF09304.10 ORF19054 - 0.22 11.8 0.1 0.22 11.8 0.1 2.8 3 1 1 4 4 4 0 Cortexillin I, coiled coil Torus PF16131.5 ORF16964 - 6.9e-13 49.3 9.6 1.5e-06 28.8 1.3 3.1 2 1 1 3 3 3 2 Torus domain zf_CCCH_4 PF18345.1 ORF16964 - 1.5e-10 40.7 22.9 9e-06 25.6 4.2 3.2 3 0 0 3 3 3 2 Zinc finger domain zf-CCCH PF00642.24 ORF16964 - 1.9e-10 40.4 9.3 6.1e-05 22.8 1.4 2.9 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-C2H2_2 PF12756.7 ORF16964 - 4.7e-08 33.3 21.0 0.00023 21.4 0.1 4.3 2 2 2 4 4 4 3 C2H2 type zinc-finger (2 copies) zf-CCCH_4 PF18044.1 ORF16964 - 4.8e-08 32.6 7.7 2.4e-05 24.0 0.7 3.4 3 0 0 3 3 2 2 CCCH-type zinc finger zf-C2H2_jaz PF12171.8 ORF16964 - 3.2e-07 30.5 17.0 0.015 15.5 0.0 4.7 4 0 0 4 4 4 3 Zinc-finger double-stranded RNA-binding zf-CCCH_2 PF14608.6 ORF16964 - 1.1e-06 28.9 9.8 0.0059 17.0 1.8 2.9 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger zf-C2H2_6 PF13912.6 ORF16964 - 9.1e-05 22.3 14.3 0.0021 18.0 0.0 4.2 4 0 0 4 4 4 1 C2H2-type zinc finger zf-C2H2_4 PF13894.6 ORF16964 - 0.0011 19.6 30.0 0.0047 17.6 0.0 6.0 6 1 0 6 6 4 3 C2H2-type zinc finger zf-met PF12874.7 ORF16964 - 0.0018 18.6 15.6 0.33 11.4 0.1 4.1 4 0 0 4 4 3 2 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 ORF16964 - 0.0031 17.9 0.1 0.0031 17.9 0.1 6.6 6 1 0 6 6 6 3 Zinc finger, C2H2 type zf-B_box PF00643.24 ORF16964 - 0.0054 16.8 3.8 0.0054 16.8 3.8 3.8 5 0 0 5 5 4 1 B-box zinc finger DUF629 PF04780.12 ORF16964 - 0.11 11.0 11.7 0.22 10.0 0.1 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF629) PRP21_like_P PF12230.8 ORF16964 - 0.15 11.9 2.8 5.1 6.9 0.5 2.4 1 1 1 2 2 2 0 Pre-mRNA splicing factor PRP21 like protein zf-C2H2_11 PF16622.5 ORF16964 - 1.6 8.5 7.3 12 5.8 0.2 3.7 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-CCCH_3 PF15663.5 ORF16964 - 5 7.4 18.5 2.3 8.5 8.6 3.5 2 2 2 4 4 4 0 Zinc-finger containing family LAGLIDADG_3 PF14528.6 ORF16518 - 1.4e-09 38.1 0.1 0.0032 17.7 0.0 3.1 3 0 0 3 3 3 2 LAGLIDADG-like domain LAGLIDADG_1 PF00961.19 ORF16518 - 2e-07 31.9 0.0 0.0081 17.1 0.0 2.8 2 1 0 2 2 2 2 LAGLIDADG endonuclease CS PF04969.16 ORF14096 - 0.00011 23.1 0.4 0.00034 21.6 0.4 1.9 1 1 0 1 1 1 1 CS domain DUF777 PF05606.11 ORF14096 - 0.044 13.5 1.9 2.4 7.9 0.1 2.4 1 1 1 2 2 2 0 Borrelia burgdorferi protein of unknown function (DUF777) Ion_trans_2 PF07885.16 ORF12775 - 2.3e-32 110.8 16.7 8.6e-17 60.9 2.5 2.3 2 0 0 2 2 2 2 Ion channel Ion_trans PF00520.31 ORF12775 - 0.00034 19.9 6.7 0.025 13.8 1.7 2.7 2 1 1 3 3 3 2 Ion transport protein IRK PF01007.20 ORF12775 - 0.00036 20.3 0.6 0.18 11.6 0.0 2.5 2 0 0 2 2 2 2 Inward rectifier potassium channel transmembrane domain Lig_chan PF00060.26 ORF12775 - 0.0087 15.9 0.5 0.029 14.2 0.5 1.6 1 1 0 1 1 1 1 Ligand-gated ion channel DUF3829 PF12889.7 ORF110847 - 0.18 11.2 0.0 0.61 9.5 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3829) Rx_N PF18052.1 ORF110847 - 0.3 11.4 3.5 0.9 9.9 0.1 3.0 3 1 0 3 3 3 0 Rx N-terminal domain malic PF00390.19 NODE_16065_length_1108_cov_2.328052_g12192_i0reverse_frame_1 - 9.7e-81 269.9 0.0 2e-80 268.9 0.0 1.5 2 0 0 2 2 2 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 NODE_16065_length_1108_cov_2.328052_g12192_i0reverse_frame_1 - 7.9e-27 94.1 0.4 1.1e-26 93.6 0.4 1.2 1 0 0 1 1 1 1 Malic enzyme, NAD binding domain TAXi_C PF14541.6 NODE_15924_length_1113_cov_3.066790_g12064_i0reverse_frame_3 - 0.061 13.1 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal Asp PF00026.23 NODE_15924_length_1113_cov_3.066790_g12064_i0reverse_frame_2 - 8.5e-16 58.3 0.0 1e-15 58.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_15924_length_1113_cov_3.066790_g12064_i0reverse_frame_2 - 1.9e-06 28.2 0.1 2.8e-06 27.7 0.1 1.3 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 NODE_15924_length_1113_cov_3.066790_g12064_i0reverse_frame_2 - 0.036 13.8 0.0 0.095 12.5 0.0 1.6 2 0 0 2 2 2 0 Xylanase inhibitor C-terminal Filament PF00038.21 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.0033 17.0 55.6 0.81 9.2 30.4 3.8 1 1 2 3 3 3 2 Intermediate filament protein ATG16 PF08614.11 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.007 16.6 14.6 0.007 16.6 14.6 4.2 1 1 2 4 4 4 1 Autophagy protein 16 (ATG16) ERM PF00769.19 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.01 15.7 57.1 0.25 11.1 14.5 3.2 2 1 1 3 3 3 0 Ezrin/radixin/moesin family bZIP_1 PF00170.21 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.013 15.6 1.7 0.013 15.6 1.7 6.8 2 2 5 7 7 6 0 bZIP transcription factor ADIP PF11559.8 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.013 15.5 13.0 0.013 15.5 13.0 4.5 1 1 3 4 4 4 0 Afadin- and alpha -actinin-Binding ZirS_C PF16583.5 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.06 12.9 0.1 0.22 11.1 0.0 1.9 2 0 0 2 2 2 0 Zinc-regulated secreted antivirulence protein C-terminal domain DUF3584 PF12128.8 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.35 8.3 52.7 0.49 7.8 52.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Golgin_A5 PF09787.9 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 1 8.8 64.0 0.079 12.4 22.0 3.4 1 1 0 3 3 3 0 Golgin subfamily A member 5 HtaA PF04213.13 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 1.1 9.7 4.7 0.81 10.2 0.3 2.4 2 1 0 2 2 2 0 Htaa UPF0242 PF06785.11 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 3.6 7.6 72.0 0.02 15.0 22.9 4.1 1 1 3 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 6.9 5.9 46.6 3.2 7.0 21.3 2.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) ERAP1_C PF11838.8 ORF9425 - 2.9e-24 86.2 0.0 3.4e-24 86.0 0.0 1.0 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Borrelia_orfD PF02999.14 ORF9425 - 0.08 13.3 0.8 0.38 11.1 0.1 2.5 2 0 0 2 2 2 0 Borrelia orf-D family ILEI PF15711.5 ORF9425 - 0.12 12.9 0.5 1.6 9.3 0.1 2.6 2 0 0 2 2 2 0 Interleukin-like EMT inducer RPN7 PF10602.9 ORF94154 - 3.7e-31 108.1 0.0 6.5e-31 107.4 0.0 1.4 1 0 0 1 1 1 1 26S proteasome subunit RPN7 PCI PF01399.27 ORF94154 - 6.7e-14 52.3 1.4 1.4e-12 48.0 0.1 2.4 2 0 0 2 2 2 1 PCI domain TPR_12 PF13424.6 ORF94154 - 0.00092 19.5 1.4 0.0029 17.8 0.3 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF94154 - 0.0025 17.7 0.3 0.029 14.4 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat DNA_pol3_delt_C PF14840.6 ORF94154 - 0.13 12.6 1.0 3.4 8.0 0.0 2.6 3 0 0 3 3 3 0 Processivity clamp loader gamma complex DNA pol III C-term DUF1816 PF08846.10 ORF94154 - 0.15 12.1 0.1 5.1 7.2 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1816) TMEM151 PF14857.6 ORF94048 - 0.0083 15.1 0.5 0.56 9.1 0.2 2.2 2 0 0 2 2 2 2 TMEM151 family DUF5359 PF17313.2 ORF90892 - 3 7.9 5.5 40 4.3 2.3 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5359) DUF2207 PF09972.9 ORF90377 - 0.02 13.7 0.0 0.02 13.7 0.0 1.8 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) EcoRI_methylase PF13651.6 ORF90377 - 0.15 11.3 0.2 0.24 10.6 0.2 1.3 1 0 0 1 1 1 0 Adenine-specific methyltransferase EcoRI SRP_TPR_like PF17004.5 ORF89087 - 0.26 11.3 2.6 6.2 6.9 2.6 2.4 1 1 0 1 1 1 0 Putative TPR-like repeat Brix PF04427.18 ORF85864 - 5.8e-25 88.5 1.9 1.2e-24 87.5 1.9 1.5 1 0 0 1 1 1 1 Brix domain STAT2_C PF12188.8 ORF85864 - 0.19 11.7 1.2 10 6.1 0.1 3.5 3 0 0 3 3 3 0 Signal transducer and activator of transcription 2 C terminal Peptidase_C1 PF00112.23 ORF81743 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF81743 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF81743 - 9e-08 32.5 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Nuc_sug_transp PF04142.15 ORF79035 - 4.2e-75 252.8 4.8 5e-75 252.6 4.8 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter UAA PF08449.11 ORF79035 - 2.8e-07 30.0 7.8 4.2e-07 29.5 7.8 1.2 1 0 0 1 1 1 1 UAA transporter family ATP19 PF11022.8 ORF79035 - 0.27 11.7 2.2 1 9.8 0.0 2.7 3 0 0 3 3 3 0 ATP synthase subunit K EamA PF00892.20 ORF79035 - 0.73 10.0 23.1 0.75 10.0 10.6 2.9 3 1 0 3 3 3 0 EamA-like transporter family STT3 PF02516.14 ORF79035 - 0.98 8.3 9.7 1.8 7.4 0.5 2.1 2 0 0 2 2 2 0 Oligosaccharyl transferase STT3 subunit Peptidase_U4 PF03419.13 ORF79035 - 4.5 6.5 9.8 0.14 11.4 2.4 2.1 2 1 0 2 2 2 0 Sporulation factor SpoIIGA Peptidase_C1 PF00112.23 ORF78677 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF78677 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF78677 - 9e-08 32.4 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) FTSW_RODA_SPOVE PF01098.19 ORF78269 - 1.4e-125 419.0 28.9 1.8e-125 418.7 28.9 1.0 1 0 0 1 1 1 1 Cell cycle protein Aldedh PF00171.22 ORF7315 - 5.3e-70 236.2 0.0 8.3e-70 235.6 0.0 1.2 1 1 0 1 1 1 1 Aldehyde dehydrogenase family DUF1433 PF07252.11 ORF7315 - 0.026 14.8 0.1 0.085 13.1 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1433) DDE_Tnp_1 PF01609.21 ORF72850 - 7.2e-30 104.2 0.0 1.2e-29 103.5 0.0 1.4 1 0 0 1 1 1 1 Transposase DDE domain Glyco_tranf_2_4 PF13704.6 ORF71065 - 0.0052 17.3 0.7 0.013 16.0 0.3 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 2 MFS_1 PF07690.16 ORF70303 - 2.2e-09 36.7 21.2 2.2e-09 36.7 21.2 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF1980 PF09323.10 ORF70303 - 0.3 11.0 5.1 0.044 13.7 1.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) Aldedh PF00171.22 ORF67325 - 5.3e-70 236.2 0.0 8.3e-70 235.6 0.0 1.2 1 1 0 1 1 1 1 Aldehyde dehydrogenase family DUF1433 PF07252.11 ORF67325 - 0.026 14.8 0.1 0.085 13.1 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1433) DUF5359 PF17313.2 ORF62829 - 3 7.9 5.5 40 4.3 2.3 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5359) TMEM151 PF14857.6 ORF52481 - 0.0083 15.1 0.5 0.56 9.1 0.2 2.2 2 0 0 2 2 2 2 TMEM151 family Lipoxygenase PF00305.19 ORF46731 - 2.3e-14 52.8 0.0 4.8e-14 51.7 0.0 1.4 1 1 0 1 1 1 1 Lipoxygenase Peptidase_C1 PF00112.23 ORF4385 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF4385 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF4385 - 9e-08 32.4 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF40222 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF40222 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF40222 - 9e-08 32.4 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) p450 PF00067.22 ORF39465 - 2.2e-48 165.2 0.1 2.7e-48 164.9 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 Glyco_transf_15 PF01793.16 ORF39106 - 7.8e-40 137.1 0.3 9.7e-40 136.8 0.3 1.0 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase EGF_2 PF07974.13 ORF39106 - 0.0068 16.8 0.7 0.0068 16.8 0.7 1.9 2 0 0 2 2 2 1 EGF-like domain TCR PF03638.15 ORF39106 - 1.2 9.5 6.7 0.45 10.9 0.9 2.2 2 0 0 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain PI3_PI4_kinase PF00454.27 ORF38938 - 1.3e-22 80.8 0.0 1.7e-22 80.5 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase Aldedh PF00171.22 ORF38264 - 5.3e-70 236.2 0.0 8.3e-70 235.6 0.0 1.2 1 1 0 1 1 1 1 Aldehyde dehydrogenase family DUF1433 PF07252.11 ORF38264 - 0.026 14.8 0.1 0.085 13.1 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1433) GlcNAc PF11397.8 ORF36539 - 9.3e-56 189.8 0.0 1.5e-55 189.1 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase (GlcNAc) EF-hand_7 PF13499.6 ORF34297 - 3.1e-11 43.5 7.1 9.9e-08 32.3 1.7 3.0 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF34297 - 6.2e-10 38.2 1.1 1.7e-05 24.4 0.1 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF34297 - 1e-09 37.2 3.4 7.5e-06 25.1 0.1 2.8 3 0 0 3 3 3 2 EF hand Ion_trans PF00520.31 ORF34297 - 1.2e-08 34.5 9.4 2.1e-08 33.7 9.4 1.4 1 0 0 1 1 1 1 Ion transport protein EF-hand_5 PF13202.6 ORF34297 - 2.8e-06 26.6 0.8 0.00047 19.5 0.3 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF34297 - 2.2e-05 24.2 4.2 0.01 15.7 0.2 3.3 3 0 0 3 3 3 2 EF-hand domain pair Caleosin PF05042.13 ORF34297 - 0.011 15.7 0.2 1.3 9.0 0.0 2.4 2 0 0 2 2 2 0 Caleosin related protein ATP-synt_S1 PF05827.12 ORF34297 - 0.61 9.9 4.2 15 5.4 0.1 2.4 2 0 0 2 2 2 0 Vacuolar ATP synthase subunit S1 (ATP6S1) NIF PF03031.18 ORF29161 - 2e-44 151.1 4.6 2e-44 151.1 4.6 1.9 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase Peptidase_C1 PF00112.23 ORF27058 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF27058 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF27058 - 9e-08 32.4 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) p450 PF00067.22 ORF27009 - 6.8e-55 186.6 1.2 9e-55 186.2 1.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 SLATT_5 PF18160.1 ORF27009 - 0.47 9.8 6.2 2.3 7.5 1.2 2.2 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 GAS2 PF02187.17 ORF25641 - 1.8e-08 34.3 0.1 4.5e-08 33.1 0.1 1.7 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain DUF550 PF04447.12 ORF24016 - 0.053 13.6 0.2 0.14 12.3 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF550) Intimin_C PF07979.11 ORF24016 - 0.088 13.2 0.1 1.4 9.4 0.0 2.2 2 0 0 2 2 2 0 Intimin C-type lectin domain Acetyltransf_11 PF13720.6 ORF24016 - 0.14 12.6 0.0 2.4 8.7 0.0 2.6 3 0 0 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NUC153 PF08159.12 ORF23704 - 0.073 12.9 1.5 0.15 11.9 0.3 2.2 2 0 0 2 2 2 0 NUC153 domain DUF4266 PF14086.6 ORF23704 - 0.19 12.7 0.1 1.1 10.2 0.1 2.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4266) Mem_trans PF03547.18 ORF23704 - 6.6 5.0 5.2 8.9 4.6 5.2 1.4 1 0 0 1 1 1 0 Membrane transport protein BCDHK_Adom3 PF10436.9 ORF22838 - 1.1e-27 96.8 0.1 1.6e-27 96.3 0.1 1.2 1 0 0 1 1 1 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase HATPase_c PF02518.26 ORF22838 - 2.9e-13 50.3 0.0 5.7e-13 49.4 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF22838 - 0.0002 21.2 0.0 0.00033 20.5 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THF_DHG_CYH PF00763.23 ORF22641 - 0.00082 19.6 0.0 0.0017 18.6 0.0 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DUF3343 PF11823.8 ORF22641 - 0.05 13.1 0.2 0.69 9.4 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) His_Phos_2 PF00328.22 ORF19190 - 1.5e-12 47.6 0.1 4e-09 36.3 0.0 2.3 2 1 0 2 2 2 2 Histidine phosphatase superfamily (branch 2) His_Phos_1 PF00300.22 ORF19190 - 0.0069 16.1 0.4 0.034 13.8 0.0 2.2 3 0 0 3 3 3 1 Histidine phosphatase superfamily (branch 1) DUF5631 PF18645.1 ORF16344 - 0.1 13.0 0.1 0.3 11.5 0.1 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5631) Acyltransferase PF01553.21 ORF107015 - 3.2e-14 52.7 0.0 6.7e-14 51.7 0.0 1.5 1 0 0 1 1 1 1 Acyltransferase HU-CCDC81_euk_2 PF18289.1 NODE_16140_length_1105_cov_67.911215_g12255_i0reverse_frame_1 - 1e-08 35.2 0.0 2.1e-08 34.2 0.0 1.5 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 NODE_16140_length_1105_cov_67.911215_g12255_i0reverse_frame_1 - 4.3e-05 23.6 0.5 0.0001 22.4 0.4 1.8 1 1 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 Bac_DNA_binding PF00216.21 NODE_16140_length_1105_cov_67.911215_g12255_i0reverse_frame_1 - 0.0074 16.5 0.0 6.7 7.0 0.0 2.4 2 0 0 2 2 2 2 Bacterial DNA-binding protein Egg_lysin PF01303.17 NODE_16140_length_1105_cov_67.911215_g12255_i0reverse_frame_1 - 0.11 12.8 0.1 0.2 11.9 0.1 1.4 1 0 0 1 1 1 0 Egg lysin (Sperm-lysin) ABC_tran PF00005.27 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 3.4e-19 69.7 0.0 6.6e-19 68.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 2.1e-06 27.8 0.1 0.001 19.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system NACHT PF05729.12 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.00016 21.6 1.7 0.0049 16.8 1.7 2.3 1 1 0 1 1 1 1 NACHT domain SMC_N PF02463.19 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.00018 21.0 0.0 0.0005 19.6 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.0031 17.3 0.0 0.0066 16.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.0092 16.4 0.0 0.014 15.8 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.012 15.5 0.0 0.02 14.8 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.013 15.5 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.051 13.2 0.1 0.099 12.2 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_29 PF13555.6 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.069 12.9 0.1 0.14 11.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.16 11.5 0.0 0.31 10.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.17 11.4 0.0 0.33 10.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Rad17 PF03215.15 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.18 11.7 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_22 PF13401.6 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_1 - 0.24 11.7 0.8 1 9.6 0.6 2.2 1 1 1 2 2 2 0 AAA domain DUF3791 PF12668.7 NODE_16057_length_1108_cov_86.178938_g12185_i0forward_frame_3 - 0.69 10.0 7.6 0.26 11.4 0.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3791) Ldh_1_N PF00056.23 ORF99315 - 1.4e-33 115.9 0.0 2.1e-33 115.4 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF99315 - 1.2e-32 113.1 0.1 2.4e-32 112.2 0.0 1.5 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain PPR_2 PF13041.6 ORF97309 - 1.1e-48 163.2 0.0 3.3e-08 33.6 0.0 8.1 2 2 7 9 9 9 9 PPR repeat family PPR_3 PF13812.6 ORF97309 - 1.2e-34 118.2 0.0 3.6e-06 27.0 0.0 6.1 3 1 4 7 7 7 7 Pentatricopeptide repeat domain PPR PF01535.20 ORF97309 - 2.8e-33 111.8 2.1 0.0047 17.1 0.0 8.6 9 0 0 9 9 9 8 PPR repeat PPR_1 PF12854.7 ORF97309 - 1.6e-21 75.6 0.0 0.035 13.8 0.0 8.9 9 0 0 9 9 9 6 PPR repeat PPR_long PF17177.4 ORF97309 - 4.4e-14 52.3 0.0 5.7e-05 22.6 0.0 3.0 1 1 2 3 3 3 3 Pentacotripeptide-repeat region of PRORP TPR_7 PF13176.6 ORF97309 - 5.6e-05 22.9 1.4 3.3 8.0 0.0 5.1 6 0 0 6 6 6 2 Tetratricopeptide repeat ATP-grasp_4 PF13535.6 ORF97309 - 0.011 15.4 0.0 4.5 6.9 0.0 4.2 3 2 2 5 5 5 0 ATP-grasp domain DUF4311 PF14188.6 ORF97309 - 0.054 13.3 0.6 0.47 10.2 0.1 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4311) Flu_B_NS1 PF02942.14 ORF97309 - 0.059 12.4 0.0 20 4.2 0.0 3.3 2 1 2 4 4 4 0 Influenza B non-structural protein (NS1) DUF4596 PF15363.6 ORF97309 - 0.85 9.9 7.6 2 8.7 0.0 4.5 4 1 1 5 5 5 0 Domain of unknown function (DUF4596) S1-P1_nuclease PF02265.16 ORF9200 - 7.7e-23 81.6 0.6 1.8e-15 57.4 0.0 2.0 2 0 0 2 2 2 2 S1/P1 Nuclease Pkinase_Tyr PF07714.17 ORF8991 - 4.5e-48 163.8 0.0 5.6e-48 163.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF8991 - 7.5e-46 156.6 0.0 9.9e-46 156.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF8991 - 0.013 14.8 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Nup96 PF12110.8 ORF89269 - 3.2e-28 98.7 1.5 4.3e-28 98.3 1.5 1.2 1 0 0 1 1 1 1 Nuclear protein 96 FHA PF00498.26 ORF87246 - 2.1e-07 31.2 0.0 4.2e-07 30.2 0.0 1.5 1 0 0 1 1 1 1 FHA domain SOBP PF15279.6 ORF87246 - 2.5 8.6 18.2 3.5 8.2 18.2 1.2 1 0 0 1 1 1 0 Sine oculis-binding protein Solute_trans_a PF03619.16 ORF82912 - 1.8e-09 37.5 7.1 3.6e-09 36.6 7.1 1.5 1 1 0 1 1 1 1 Organic solute transporter Ostalpha p450 PF00067.22 ORF81052 - 4.6e-48 164.1 0.3 7.4e-48 163.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome P450 bZIP_1 PF00170.21 ORF69573 - 0.00069 19.7 2.5 0.00069 19.7 2.5 4.1 5 0 0 5 5 5 1 bZIP transcription factor Pil1 PF13805.6 ORF69573 - 0.0057 16.2 1.1 0.0057 16.2 1.1 2.6 2 1 1 3 3 3 1 Eisosome component PIL1 Sugarporin_N PF11471.8 ORF69573 - 0.03 14.3 0.0 0.059 13.3 0.0 1.5 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension bZIP_2 PF07716.15 ORF69573 - 0.03 14.4 3.1 0.03 14.4 3.1 3.5 3 0 0 3 3 3 0 Basic region leucine zipper UPF0242 PF06785.11 ORF69573 - 0.049 13.7 0.9 0.049 13.7 0.9 3.2 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus TRAF_BIRC3_bd PF16673.5 ORF69573 - 0.067 13.0 1.3 0.39 10.5 0.2 2.7 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain FAD_binding_7 PF03441.14 ORF60991 - 3.6e-39 134.3 0.3 6.5e-39 133.5 0.3 1.4 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase CRAL_TRIO PF00650.20 ORF5889 - 8.1e-24 84.1 0.0 1.1e-23 83.7 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF5889 - 3e-07 30.7 0.0 5.8e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF5523 PF17661.1 ORF5889 - 0.056 13.1 2.0 0.084 12.5 2.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5523) PGA2 PF07543.12 ORF5889 - 3 7.8 5.5 6.1 6.8 5.5 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 SSF PF00474.17 ORF51434 - 4.9e-22 78.4 3.4 4.9e-22 78.4 3.4 2.3 2 1 0 2 2 2 1 Sodium:solute symporter family Polysacc_synt_C PF14667.6 ORF51434 - 0.016 15.3 0.5 0.016 15.3 0.5 3.5 2 1 1 3 3 3 0 Polysaccharide biosynthesis C-terminal domain CcmD PF04995.14 ORF51434 - 0.022 14.8 0.1 0.09 12.9 0.1 2.1 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) AnmK PF03702.14 ORF46491 - 2e-178 593.1 0.1 2.2e-178 592.9 0.1 1.0 1 0 0 1 1 1 1 Anhydro-N-acetylmuramic acid kinase FGGY_C PF02782.16 ORF46491 - 0.1 12.3 0.1 0.19 11.4 0.1 1.5 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain DGC PF08859.11 ORF45791 - 1.5e-05 25.0 14.3 0.047 13.8 0.7 4.2 3 2 0 4 4 4 3 DGC domain GBP_PSP PF02425.15 ORF45791 - 2.2 8.0 9.4 9.9 5.9 0.1 3.9 3 0 0 3 3 3 0 Paralytic/GBP/PSP peptide SbmA_BacA PF05992.12 ORF43792 - 9.5e-127 422.8 5.2 1.1e-126 422.6 5.2 1.0 1 0 0 1 1 1 1 SbmA/BacA-like family ABC_membrane_2 PF06472.15 ORF43792 - 3.3e-14 52.9 3.1 3.2e-13 49.7 3.1 2.3 1 1 0 1 1 1 1 ABC transporter transmembrane region 2 ubiquitin PF00240.23 ORF41566 - 0.00066 19.4 0.6 0.0011 18.6 0.6 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF41566 - 0.031 14.1 0.2 0.088 12.6 0.2 1.8 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like PI3K_rbd PF00794.18 ORF41566 - 0.1 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain CSTF2_hinge PF14327.6 ORF41566 - 0.36 11.3 3.4 9 6.8 0.7 3.4 4 0 0 4 4 4 0 Hinge domain of cleavage stimulation factor subunit 2 DUF3887 PF13026.6 ORF41566 - 1.4 9.8 4.9 0.36 11.7 0.6 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF3887) bZIP_1 PF00170.21 ORF36419 - 0.00069 19.7 2.5 0.00069 19.7 2.5 4.1 5 0 0 5 5 5 1 bZIP transcription factor Pil1 PF13805.6 ORF36419 - 0.0057 16.2 1.1 0.0057 16.2 1.1 2.6 2 1 1 3 3 3 1 Eisosome component PIL1 Sugarporin_N PF11471.8 ORF36419 - 0.03 14.3 0.0 0.059 13.3 0.0 1.5 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension bZIP_2 PF07716.15 ORF36419 - 0.03 14.4 3.1 0.03 14.4 3.1 3.5 3 0 0 3 3 3 0 Basic region leucine zipper UPF0242 PF06785.11 ORF36419 - 0.049 13.7 0.9 0.049 13.7 0.9 3.2 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus TRAF_BIRC3_bd PF16673.5 ORF36419 - 0.067 13.0 1.3 0.39 10.5 0.2 2.7 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF5408 PF17402.2 ORF36345 - 0.045 13.6 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5408) Amidohydro_1 PF01979.20 ORF34178 - 1.2e-24 87.3 0.0 1.1e-23 84.1 0.0 2.0 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF34178 - 4.2e-05 23.2 2.3 0.0009 18.8 2.3 2.1 1 1 0 1 1 1 1 Amidohydrolase family PQQ_2 PF13360.6 ORF30543 - 6.1e-19 68.5 0.5 2.5e-14 53.4 0.0 3.2 2 2 0 2 2 2 2 PQQ-like domain PQQ PF01011.21 ORF30543 - 1.1e-14 53.5 1.1 0.01 15.7 0.0 6.9 6 1 1 7 7 7 3 PQQ enzyme repeat PQQ_3 PF13570.6 ORF30543 - 4.5e-09 36.5 8.3 0.076 13.5 0.0 6.7 8 0 0 8 8 8 3 PQQ-like domain EF-hand_5 PF13202.6 ORF30543 - 0.0019 17.6 1.1 0.0029 17.0 0.1 1.9 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF30543 - 0.012 15.1 0.0 0.026 14.1 0.0 1.5 1 0 0 1 1 1 0 EF hand Tachylectin PF14517.6 ORF30543 - 0.017 14.7 0.1 0.84 9.1 0.0 2.9 2 1 0 3 3 3 0 Tachylectin EF-hand_6 PF13405.6 ORF30543 - 0.063 13.2 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain p450 PF00067.22 ORF2576 - 7.4e-48 163.4 0.3 1.2e-47 162.7 0.3 1.2 1 0 0 1 1 1 1 Cytochrome P450 WD40 PF00400.32 ORF218 - 1.3e-14 54.3 8.9 0.00018 22.2 0.6 5.5 5 1 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF218 - 3.8e-05 23.9 0.0 0.0082 16.4 0.0 3.7 1 1 4 5 5 5 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4116 PF13475.6 ORF20446 - 2.4e-55 184.0 0.0 7.7e-10 38.3 0.0 7.1 6 1 1 7 7 7 7 Domain of unknown function (DUF4116) KIF1B PF12423.8 ORF19680 - 3.9 8.0 5.9 2 8.9 0.2 3.0 3 0 0 3 3 3 0 Kinesin protein 1B HATPase_c PF02518.26 ORF19445 - 4e-27 94.9 0.0 8.9e-27 93.8 0.0 1.6 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF19445 - 1.4e-18 66.7 1.0 5.4e-18 64.8 0.3 2.2 1 1 1 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 ORF19445 - 4.1e-11 42.9 0.0 9.5e-11 41.7 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 ORF19445 - 2e-08 34.2 0.0 3.9e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PhoR PF11808.8 ORF19445 - 4.2e-06 27.1 0.3 8.1e-06 26.2 0.3 1.5 1 0 0 1 1 1 1 Phosphate regulon sensor protein PhoR HATPase_c_3 PF13589.6 ORF19445 - 4.8e-06 26.4 0.0 8.2e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 ORF19445 - 0.00019 21.4 0.0 0.00041 20.3 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 ORF19445 - 0.02 15.1 0.0 0.089 13.1 0.0 2.0 2 0 0 2 2 2 0 PAS domain tRNA-synt_1c PF00749.21 ORF17021 - 5.3e-40 137.2 0.0 9e-40 136.5 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain SQHop_cyclase_C PF13243.6 ORF15683 - 1.8e-62 211.3 3.9 2.3e-62 210.9 3.9 1.0 1 0 0 1 1 1 1 Squalene-hopene cyclase C-terminal domain Prenyltrans PF00432.21 ORF15683 - 1.1e-21 76.2 24.1 1.5e-10 40.6 1.2 5.0 5 1 0 5 5 5 3 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_N PF13249.6 ORF15683 - 2.6e-06 26.8 3.7 0.34 9.9 0.0 4.5 2 2 2 5 5 5 3 Squalene-hopene cyclase N-terminal domain TED_complement PF07678.14 ORF15683 - 5.9e-05 22.2 0.4 0.18 10.8 0.0 3.6 4 0 0 4 4 4 2 A-macroglobulin TED domain Pec_lyase PF09492.10 ORF15683 - 0.00034 20.0 0.4 5.7 6.2 0.0 4.0 2 2 0 2 2 2 2 Pectic acid lyase Cupin_8 PF13621.6 ORF15433 - 2.8e-12 46.9 1.2 4.5e-12 46.2 1.2 1.3 1 0 0 1 1 1 1 Cupin-like domain JmjC PF02373.22 ORF15433 - 6.1e-05 23.4 0.2 0.00016 22.1 0.2 1.7 1 0 0 1 1 1 1 JmjC domain, hydroxylase EutQ PF06249.12 ORF15433 - 0.077 12.8 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ NYD-SP28_assoc PF14775.6 ORF1245 - 0.043 13.9 1.5 0.094 12.8 1.5 1.5 1 0 0 1 1 1 0 Sperm tail C-terminal domain PPR_2 PF13041.6 ORF111097 - 2.1e-25 88.6 0.0 7.9e-06 26.0 0.0 4.9 4 1 1 5 5 5 4 PPR repeat family PPR PF01535.20 ORF111097 - 2.8e-17 61.7 4.7 0.00024 21.1 0.1 6.5 7 0 0 7 7 7 4 PPR repeat PPR_3 PF13812.6 ORF111097 - 9.7e-13 48.0 0.0 0.00078 19.5 0.0 4.7 3 2 3 6 6 6 5 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF111097 - 9.7e-12 44.4 0.0 0.002 17.8 0.0 5.7 7 0 0 7 7 7 3 PPR repeat DUF5014 PF16406.5 ORF104573 - 0.021 15.1 0.1 32 4.9 0.0 3.6 3 0 0 3 3 3 0 Domain of unknown function (DUF5014) YukD PF08817.10 ORF104573 - 0.058 14.1 0.3 19 6.0 0.0 3.6 4 0 0 4 4 4 0 WXG100 protein secretion system (Wss), protein YukD AAA_33 PF13671.6 NODE_16163_length_1104_cov_104.734331_g12274_i0reverse_frame_1 - 1.8e-07 31.4 0.0 4.4e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain Toprim_3 PF13362.6 NODE_16163_length_1104_cov_104.734331_g12274_i0reverse_frame_1 - 0.039 14.3 0.1 4.5 7.7 0.0 2.5 2 1 0 2 2 2 0 Toprim domain Bac_GH3_C PF18034.1 NODE_16163_length_1104_cov_104.734331_g12274_i0reverse_frame_1 - 0.21 11.3 0.0 0.92 9.3 0.0 2.0 2 0 0 2 2 2 0 Bacterial Glycosyl hydrolase family 3 C-terminal domain RTP801_C PF07809.11 NODE_16140_length_1105_cov_67.911215_g12255_i0reverse_frame_2 - 0.48 10.3 6.8 1.3 8.9 0.2 3.4 3 1 1 4 4 4 0 RTP801 C-terminal region Plug PF07715.15 NODE_16098_length_1107_cov_2.345149_g12221_i0forward_frame_2 - 1e-07 32.5 0.8 1.6e-07 31.8 0.8 1.2 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain UvrB_inter PF17757.1 NODE_16096_length_1107_cov_2.772388_g12219_i0reverse_frame_2 - 2.5e-32 110.9 0.1 4.5e-32 110.1 0.1 1.4 1 0 0 1 1 1 1 UvrB interaction domain UB2H PF14814.6 NODE_16096_length_1107_cov_2.772388_g12219_i0reverse_frame_2 - 0.014 15.4 0.0 0.039 14.0 0.0 1.8 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain SBDS_C PF09377.10 NODE_16096_length_1107_cov_2.772388_g12219_i0reverse_frame_2 - 0.17 11.9 0.0 0.34 10.9 0.0 1.5 1 0 0 1 1 1 0 SBDS protein C-terminal domain Thioredoxin PF00085.20 ORF93613 - 0.012 15.5 2.0 1.1 9.3 0.0 3.7 4 0 0 4 4 4 0 Thioredoxin Aminotran_5 PF00266.19 ORF90780 - 1.4e-46 159.2 0.0 1.6e-46 159.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Ank_2 PF12796.7 ORF88810 - 1e-14 54.8 0.0 1.8e-14 54.1 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF88810 - 3.5e-13 48.4 0.0 2.3e-05 24.4 0.0 3.6 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF88810 - 2.2e-12 47.3 0.0 1.8e-06 28.4 0.0 2.6 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF88810 - 3.5e-12 46.3 0.0 2.9e-05 24.2 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_1 PF00583.25 ORF88810 - 2.7e-10 40.5 0.0 7.2e-10 39.1 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Ank PF00023.30 ORF88810 - 1.9e-08 34.4 0.0 0.0039 17.6 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_10 PF13673.7 ORF88810 - 8.4e-08 32.2 0.0 1.6e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF88810 - 0.00037 20.4 0.0 0.00093 19.1 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 ORF88810 - 0.00054 20.3 0.0 0.0014 19.0 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF88810 - 0.046 13.9 0.0 0.086 13.0 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase CxC6 PF18721.1 ORF88810 - 2.2 8.6 7.2 0.26 11.6 1.1 2.5 3 0 0 3 3 3 0 CxC6 like cysteine cluster associated with KDZ transposases # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks33.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks33.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks33.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks33.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:01:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- KRAP_IP3R_bind PF14722.6 NODE_72529_length_217_cov_48.000000_g64588_i0reverse_frame_2 - 0.06 13.1 0.5 0.063 13.0 0.5 1.0 1 0 0 1 1 1 0 Ki-ras-induced actin-interacting protein-IP3R-interacting domain Fijivirus_P9-2 PF06837.11 NODE_72528_length_217_cov_49.406593_g64587_i0forward_frame_3 - 0.0083 15.6 0.3 0.0092 15.5 0.3 1.0 1 0 0 1 1 1 1 Fijivirus P9-2 protein DUF4358 PF14270.6 NODE_72523_length_217_cov_51.835165_g64582_i0reverse_frame_2 - 0.032 14.5 0.4 0.038 14.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4358) efb-c PF12199.8 NODE_72520_length_217_cov_54.813187_g64579_i0reverse_frame_2 - 0.038 14.0 2.0 0.052 13.6 2.0 1.3 1 0 0 1 1 1 0 Extracellular fibrinogen binding protein C terminal DUF3332 PF11810.8 NODE_72517_length_217_cov_57.335165_g64576_i0reverse_frame_2 - 0.91 9.1 5.7 0.97 9.0 5.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) STAG PF08514.11 NODE_72515_length_217_cov_58.307692_g64574_i0reverse_frame_2 - 0.072 13.0 2.1 0.15 12.0 2.1 1.4 1 1 0 1 1 1 0 STAG domain SLC3A2_N PF16028.5 NODE_72515_length_217_cov_58.307692_g64574_i0forward_frame_2 - 0.1 12.2 0.2 0.14 11.7 0.2 1.1 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Pex2_Pex12 PF04757.14 NODE_72514_length_217_cov_60.807692_g64573_i0forward_frame_2 - 0.065 12.8 0.0 0.07 12.7 0.0 1.0 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region DUF327 PF03885.13 NODE_72513_length_217_cov_66.472527_g64572_i0reverse_frame_2 - 0.03 14.3 0.1 0.037 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF327) SVWC PF15430.6 NODE_72512_length_217_cov_69.835165_g64571_i0reverse_frame_2 - 0.024 14.9 3.0 0.03 14.6 3.0 1.2 1 0 0 1 1 1 0 Single domain von Willebrand factor type C HTH_50 PF18024.1 NODE_72510_length_217_cov_70.736264_g64569_i0reverse_frame_2 - 0.031 13.9 1.6 5.6 6.7 0.2 3.0 2 1 0 2 2 2 0 Helix-turn-helix domain DUF899 PF05988.12 NODE_72508_length_217_cov_75.901099_g64567_i0reverse_frame_2 - 0.011 15.3 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) Nucleotid_trans PF03407.16 NODE_72507_length_217_cov_75.972527_g64566_i0reverse_frame_3 - 2.9e-05 24.1 0.1 3.7e-05 23.8 0.1 1.3 1 1 0 1 1 1 1 Nucleotide-diphospho-sugar transferase Calsarcin PF05556.11 NODE_72494_length_217_cov_154.225275_g64553_i0reverse_frame_3 - 0.11 12.1 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Calcineurin-binding protein (Calsarcin) PWWP PF00855.17 NODE_72482_length_218_cov_0.797814_g64541_i0forward_frame_3 - 0.13 12.6 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 PWWP domain FKBP_N_2 PF18023.1 NODE_72481_length_218_cov_0.846995_g64540_i0reverse_frame_3 - 0.07 13.2 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 BDBT FKBP like N-terminal DUF1194 PF06707.11 NODE_72472_length_218_cov_0.874317_g64531_i0reverse_frame_3 - 0.12 11.6 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1194) CAP_N PF01213.19 NODE_72471_length_218_cov_0.874317_g64530_i0forward_frame_3 - 0.22 10.9 11.0 0.23 10.9 11.0 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_72471_length_218_cov_0.874317_g64530_i0forward_frame_3 - 1.1 9.2 9.2 1.1 9.2 9.2 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator Phageshock_PspD PF09584.10 NODE_72468_length_218_cov_0.874317_g64527_i0reverse_frame_2 - 0.047 13.7 0.2 0.069 13.2 0.2 1.4 1 1 0 1 1 1 0 Phage shock protein PspD (Phageshock_PspD) PPE PF00823.19 NODE_72467_length_218_cov_0.874317_g64526_i0forward_frame_3 - 0.019 15.1 0.1 0.022 14.8 0.1 1.0 1 0 0 1 1 1 0 PPE family INCENP_ARK-bind PF03941.15 NODE_72465_length_218_cov_0.874317_g64524_i0reverse_frame_2 - 0.12 12.3 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Inner centromere protein, ARK binding region DUF2793 PF10983.8 NODE_72455_length_218_cov_1.010929_g64514_i0reverse_frame_2 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2793) MTBP_C PF14920.6 NODE_72455_length_218_cov_1.010929_g64514_i0forward_frame_3 - 0.087 12.6 0.1 0.1 12.4 0.1 1.0 1 0 0 1 1 1 0 MDM2-binding Kelch_4 PF13418.6 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 6e-13 48.6 1.6 2.2e-05 24.4 0.1 2.0 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 3.7e-11 42.8 0.1 3.2e-08 33.4 0.0 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 1.3e-10 41.2 0.3 0.00017 21.7 0.0 2.1 1 1 1 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 8.4e-10 38.7 1.2 0.00039 20.6 0.0 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 1.1e-08 34.5 0.1 0.00025 20.5 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 3.4e-07 30.0 0.4 0.00036 20.4 0.1 2.2 2 0 0 2 2 2 2 Kelch motif Synapsin_N PF10581.9 NODE_72447_length_218_cov_1.087432_g64506_i0forward_frame_3 - 0.13 12.3 0.1 2.8 8.0 0.0 2.1 2 0 0 2 2 2 0 Synapsin N-terminal ISPD_C PF18706.1 NODE_72444_length_218_cov_1.142077_g64503_i0reverse_frame_3 - 0.042 13.5 0.0 0.047 13.3 0.0 1.0 1 0 0 1 1 1 0 D-ribitol-5-phosphate cytidylyltransferase C-terminal domain DnaB_2 PF07261.11 NODE_72444_length_218_cov_1.142077_g64503_i0forward_frame_2 - 0.11 12.3 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Replication initiation and membrane attachment RhoGAP-FF1 PF16512.5 NODE_72437_length_218_cov_1.213115_g64496_i0reverse_frame_2 - 0.046 14.4 0.1 0.058 14.1 0.1 1.1 1 0 0 1 1 1 0 p190-A and -B Rho GAPs FF domain GerD PF17898.1 NODE_72437_length_218_cov_1.213115_g64496_i0reverse_frame_2 - 0.13 12.2 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Spore germination GerD central core domain DUF5310 PF17237.2 NODE_72433_length_218_cov_1.245902_g64492_i0reverse_frame_3 - 0.038 13.8 0.1 0.063 13.1 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5310) MOZ_SAS PF01853.18 NODE_72429_length_218_cov_1.278689_g64488_i0reverse_frame_3 - 1.4e-08 34.7 0.2 1.6e-08 34.5 0.2 1.1 1 0 0 1 1 1 1 MOZ/SAS family Hat1_N PF10394.9 NODE_72429_length_218_cov_1.278689_g64488_i0reverse_frame_3 - 0.00062 20.0 0.0 0.00069 19.9 0.0 1.1 1 0 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus DUF3085 PF11284.8 NODE_72428_length_218_cov_1.278689_g64487_i0reverse_frame_2 - 0.037 14.3 0.1 0.038 14.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3085) Ribosomal_L37ae PF01780.19 NODE_72425_length_218_cov_1.295082_g64484_i0reverse_frame_3 - 0.18 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal L37ae protein family DUF3511 PF12023.8 NODE_72425_length_218_cov_1.295082_g64484_i0reverse_frame_3 - 0.19 11.6 0.1 0.25 11.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3511) Phage_holin_T PF11031.8 NODE_72417_length_218_cov_1.300546_g64476_i0reverse_frame_3 - 0.064 12.7 0.6 0.071 12.6 0.6 1.0 1 0 0 1 1 1 0 Bacteriophage T holin FAM165 PF14981.6 NODE_72416_length_218_cov_1.300546_g64475_i0reverse_frame_2 - 0.0076 16.0 0.1 0.01 15.6 0.1 1.3 1 0 0 1 1 1 1 FAM165 family HECT_2 PF09814.9 NODE_72414_length_218_cov_1.306011_g64473_i0reverse_frame_2 - 0.26 10.1 6.4 0.26 10.1 6.4 1.1 1 0 0 1 1 1 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding SelP_N PF04592.14 NODE_72414_length_218_cov_1.306011_g64473_i0reverse_frame_2 - 7.5 5.9 13.5 8.5 5.7 13.5 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region SdpI PF13630.6 NODE_72414_length_218_cov_1.306011_g64473_i0forward_frame_2 - 0.99 9.6 6.4 1.3 9.2 6.4 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF5592 PF17332.2 NODE_72414_length_218_cov_1.306011_g64473_i0forward_frame_2 - 1.1 9.8 7.7 1.4 9.6 7.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5592) Herpes_HEPA PF03324.14 NODE_72412_length_218_cov_1.306011_g64471_i0forward_frame_3 - 0.068 13.6 0.1 0.084 13.3 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus DNA helicase/primase complex associated protein DUF1738 PF08401.11 NODE_72411_length_218_cov_1.306011_g64470_i0reverse_frame_3 - 0.15 12.1 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1738) SGTA_dimer PF16546.5 NODE_72411_length_218_cov_1.306011_g64470_i0forward_frame_3 - 0.14 12.0 0.1 0.74 9.6 0.0 1.9 2 0 0 2 2 2 0 Homodimerisation domain of SGTA Pox_A8 PF04745.12 NODE_72405_length_218_cov_1.311475_g64464_i0forward_frame_3 - 0.03 13.4 0.3 0.034 13.2 0.3 1.0 1 0 0 1 1 1 0 VITF-3 subunit protein MHB PF16525.5 NODE_72405_length_218_cov_1.311475_g64464_i0forward_frame_3 - 0.061 13.6 0.1 1.1 9.6 0.1 2.0 2 0 0 2 2 2 0 Haemophore, haem-binding zf-RanBP PF00641.18 NODE_72400_length_218_cov_1.311475_g64459_i0forward_frame_3 - 0.012 14.9 0.2 0.019 14.3 0.2 1.3 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DUF4661 PF15576.6 NODE_72397_length_218_cov_1.311475_g64456_i0reverse_frame_3 - 0.16 11.9 0.3 0.19 11.6 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) ANP PF00212.18 NODE_72396_length_218_cov_1.311475_g64455_i0forward_frame_3 - 0.092 12.9 3.4 0.092 12.9 3.4 2.4 2 1 0 2 2 2 0 Atrial natriuretic peptide DUF4630 PF15443.6 NODE_72396_length_218_cov_1.311475_g64455_i0forward_frame_2 - 0.066 13.4 0.1 0.071 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4630) Kinocilin PF15033.6 NODE_72395_length_218_cov_1.311475_g64454_i0forward_frame_3 - 0.068 12.8 0.1 0.078 12.6 0.1 1.1 1 0 0 1 1 1 0 Kinocilin protein Colipase PF01114.18 NODE_72394_length_218_cov_1.311475_g64453_i0reverse_frame_2 - 1.6 8.4 11.1 0.27 10.9 6.6 2.0 2 1 0 2 2 2 0 Colipase, N-terminal domain DUF4367 PF14285.6 NODE_72391_length_218_cov_1.333333_g64450_i0reverse_frame_2 - 0.021 15.2 0.3 0.022 15.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4367) CDC73_C PF05179.14 NODE_72388_length_218_cov_1.377049_g64447_i0reverse_frame_3 - 0.063 13.0 0.4 0.065 12.9 0.4 1.1 1 0 0 1 1 1 0 RNA pol II accessory factor, Cdc73 family, C-terminal UvrC_HhH_N PF08459.11 NODE_72385_length_218_cov_1.382514_g64444_i0reverse_frame_3 - 4.8e-11 42.8 0.0 7.2e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal Kdo_hydroxy PF11004.8 NODE_72385_length_218_cov_1.382514_g64444_i0reverse_frame_3 - 0.022 14.0 0.1 0.026 13.8 0.1 1.0 1 0 0 1 1 1 0 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase PIF PF05092.12 NODE_72385_length_218_cov_1.382514_g64444_i0reverse_frame_3 - 0.047 12.4 0.1 0.05 12.3 0.1 1.0 1 0 0 1 1 1 0 Per os infectivity Ripply PF14998.6 NODE_72385_length_218_cov_1.382514_g64444_i0forward_frame_3 - 0.017 15.8 0.2 0.02 15.5 0.2 1.1 1 0 0 1 1 1 0 Transcription Regulator DUF4939 PF16297.5 NODE_72385_length_218_cov_1.382514_g64444_i0forward_frame_3 - 0.032 14.1 0.0 0.033 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4939) DUF4792 PF16040.5 NODE_72384_length_218_cov_1.393443_g64443_i0forward_frame_2 - 0.056 13.4 0.2 0.066 13.1 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4792) TRP PF06011.12 NODE_72381_length_218_cov_1.409836_g64440_i0reverse_frame_2 - 0.0077 15.0 2.1 0.0085 14.9 2.1 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel AMH_N PF04709.12 NODE_72378_length_218_cov_1.437158_g64437_i0forward_frame_3 - 0.00022 20.3 0.2 0.00023 20.2 0.2 1.0 1 0 0 1 1 1 1 Anti-Mullerian hormone, N terminal region TPP_enzyme_C PF02775.21 NODE_72375_length_218_cov_1.475410_g64434_i0reverse_frame_2 - 0.0012 18.6 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TMEM132D_C PF15706.5 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 0.063 13.1 0.7 0.072 12.9 0.7 1.1 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term EphA2_TM PF14575.6 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 0.081 13.8 0.1 0.097 13.6 0.1 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Protocadherin PF08374.11 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 0.089 12.8 0.1 0.1 12.6 0.1 1.2 1 1 0 1 1 1 0 Protocadherin Prominin PF05478.11 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 1.2 6.9 10.5 1.4 6.7 10.5 1.0 1 0 0 1 1 1 0 Prominin DUF3674 PF12426.8 NODE_72373_length_218_cov_1.475410_g64432_i0forward_frame_3 - 0.023 14.7 0.1 0.033 14.2 0.1 1.3 1 0 0 1 1 1 0 RNA dependent RNA polymerase Tlr3_TMD PF17968.1 NODE_72371_length_218_cov_1.497268_g64430_i0reverse_frame_3 - 0.024 14.8 2.7 0.27 11.5 0.0 2.3 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain DUF722 PF05263.11 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_3 - 0.037 14.2 0.9 0.038 14.2 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF722) Pkinase PF00069.25 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 6.7e-15 55.2 0.2 6.8e-15 55.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 9.7e-06 25.0 0.0 1e-05 25.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.0081 15.8 0.1 0.0087 15.7 0.1 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.028 13.4 0.0 0.032 13.2 0.0 1.0 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.047 13.0 0.0 0.047 13.0 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family CDC4_D PF16856.5 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.12 12.2 0.0 0.35 10.8 0.0 1.7 1 1 0 1 1 1 0 Cell division control protein 4 dimerisation domain APH PF01636.23 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.16 11.8 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family KNOX2 PF03791.13 NODE_72362_length_218_cov_1.524590_g64421_i0forward_frame_2 - 0.12 11.9 0.9 0.16 11.5 0.3 1.7 1 1 0 1 1 1 0 KNOX2 domain tRNA_int_end_N2 PF12928.7 NODE_72358_length_218_cov_1.530055_g64417_i0forward_frame_3 - 0.19 11.9 0.3 17 5.7 0.1 2.1 2 0 0 2 2 2 0 tRNA-splicing endonuclease subunit sen54 N-term C_LFY_FLO PF17538.2 NODE_72357_length_218_cov_1.530055_g64416_i0reverse_frame_3 - 0.024 14.2 0.1 0.027 13.9 0.1 1.1 1 0 0 1 1 1 0 DNA Binding Domain (C-terminal) Leafy/Floricaula Annexin_like PF18411.1 NODE_72357_length_218_cov_1.530055_g64416_i0forward_frame_3 - 0.056 13.7 0.0 0.063 13.6 0.0 1.2 1 0 0 1 1 1 0 Annexin-like domain Pkinase PF00069.25 NODE_72353_length_218_cov_1.551913_g64412_i0forward_frame_2 - 0.00095 18.6 0.4 0.001 18.5 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72353_length_218_cov_1.551913_g64412_i0forward_frame_2 - 0.0095 15.2 0.2 0.0097 15.2 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase zf-RING_2 PF13639.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 5.1e-13 49.1 6.2 6.3e-13 48.8 6.2 1.1 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.4e-09 37.5 7.2 2.8e-09 36.6 7.2 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 7e-09 35.4 6.5 9.4e-09 35.0 6.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.5e-08 34.5 3.7 2.7e-08 33.7 3.7 1.3 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.7e-08 34.6 7.6 4.2e-08 33.4 7.6 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 3.2e-08 33.5 4.1 4.6e-08 33.0 4.1 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 4.3e-08 32.9 6.6 7.5e-08 32.1 6.6 1.4 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 6.4e-08 32.4 5.4 8.3e-08 32.1 5.4 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 3.2e-07 30.1 4.3 3.8e-07 29.9 4.3 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.6e-06 27.7 4.3 2.2e-06 27.2 4.3 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 5.5e-06 26.1 6.6 1.2e-05 25.0 6.7 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.1e-05 25.5 2.6 2.1e-05 24.6 2.6 1.5 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING PHD PF00628.29 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00014 21.7 7.5 0.00017 21.4 7.5 1.1 1 0 0 1 1 1 1 PHD-finger RINGv PF12906.7 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00019 21.5 6.9 0.00026 21.0 6.9 1.2 1 0 0 1 1 1 1 RING-variant domain Prok-RING_1 PF14446.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00019 21.3 5.9 0.0017 18.2 1.0 2.1 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-RING_4 PF14570.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00029 20.6 3.7 0.00048 19.9 3.7 1.3 1 1 0 1 1 1 1 RING/Ubox like zinc-binding domain FANCL_C PF11793.8 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00037 20.6 7.2 0.0015 18.7 7.2 1.9 1 1 0 1 1 1 1 FANCL C-terminal domain zf-Nse PF11789.8 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00082 19.1 2.1 0.0011 18.8 2.1 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zinc_ribbon_15 PF17032.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.0019 18.9 2.7 0.002 18.8 2.7 1.1 1 0 0 1 1 1 1 zinc-ribbon family zf-UDP PF14569.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.0037 17.4 2.5 0.0046 17.1 2.5 1.1 1 0 0 1 1 1 1 Zinc-binding RING-finger C1_1 PF00130.22 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.0077 16.1 7.2 0.012 15.4 2.1 2.1 1 1 1 2 2 2 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Baculo_RING PF05883.11 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.018 15.0 1.5 0.021 14.8 1.5 1.2 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Zf_RING PF16744.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.019 15.1 4.0 0.027 14.6 4.0 1.3 1 1 0 1 1 1 0 KIAA1045 RING finger PHD_4 PF16866.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.046 13.8 10.8 0.47 10.6 10.9 2.0 1 1 1 2 2 2 0 PHD-finger zf-HC5HC2H PF13771.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.05 13.9 5.3 0.18 12.1 5.5 1.7 1 1 0 1 1 1 0 PHD-like zinc-binding domain zf-RING_9 PF13901.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.053 13.5 4.1 0.065 13.2 4.1 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zf-HC5HC2H_2 PF13832.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.062 13.5 5.3 0.2 11.8 5.4 1.7 1 1 1 2 2 2 0 PHD-zinc-finger like domain zf-RING-like PF08746.11 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.074 13.4 9.4 0.16 12.3 9.4 1.7 1 1 0 1 1 1 0 RING-like domain zf-C3H2C3 PF17122.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.12 12.4 13.0 1.5 8.9 13.1 2.4 1 1 0 1 1 1 0 Zinc-finger Vps39_2 PF10367.9 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.31 11.5 3.9 0.69 10.4 0.7 2.0 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 DUF4703 PF15775.5 NODE_72352_length_218_cov_1.562842_g64411_i0forward_frame_3 - 0.028 14.2 0.3 0.028 14.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4703) Arm_vescicular PF18770.1 NODE_72351_length_218_cov_1.562842_g64410_i0reverse_frame_2 - 0.041 13.8 0.5 0.058 13.3 0.5 1.2 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor Csm1 PF12539.8 NODE_72351_length_218_cov_1.562842_g64410_i0reverse_frame_2 - 0.095 13.3 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Chromosome segregation protein Csm1/Pcs1 LPD11 PF18824.1 NODE_72350_length_218_cov_1.568306_g64409_i0reverse_frame_3 - 0.01 15.9 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 11 HU-CCDC81_bac_2 PF18175.1 NODE_72350_length_218_cov_1.568306_g64409_i0reverse_frame_3 - 0.14 12.0 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 Rad51 PF08423.11 NODE_72349_length_218_cov_1.568306_g64408_i0reverse_frame_2 - 4.4e-29 101.5 0.4 4.7e-29 101.4 0.4 1.0 1 0 0 1 1 1 1 Rad51 DUF3810 PF12725.7 NODE_72347_length_218_cov_1.590164_g64406_i0forward_frame_2 - 1.2 8.4 8.3 1.5 8.1 8.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) TMEM156 PF15106.6 NODE_72346_length_218_cov_1.628415_g64405_i0forward_frame_3 - 7.3 6.0 6.7 6.2 6.2 6.0 1.3 1 1 0 1 1 1 0 TMEM156 protein family Lamprin PF06403.11 NODE_72335_length_218_cov_1.666667_g64394_i0forward_frame_3 - 1.8 8.5 13.7 5.6 6.9 13.7 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_72335_length_218_cov_1.666667_g64394_i0forward_frame_2 - 2.5 8.1 14.0 18 5.3 14.0 1.9 1 1 0 1 1 1 0 Lamprin HigB_toxin PF09907.9 NODE_72333_length_218_cov_1.683060_g64392_i0forward_frame_2 - 0.039 14.2 0.4 0.046 13.9 0.4 1.1 1 0 0 1 1 1 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system TBK1_ULD PF18396.1 NODE_72332_length_218_cov_1.683060_g64391_i0reverse_frame_2 - 0.068 13.1 0.2 0.081 12.9 0.2 1.2 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain Rer1 PF03248.13 NODE_72331_length_218_cov_1.715847_g64390_i0reverse_frame_2 - 0.06 13.1 0.0 0.06 13.1 0.0 1.0 1 0 0 1 1 1 0 Rer1 family ARL2_Bind_BART PF11527.8 NODE_72326_length_218_cov_1.732240_g64385_i0reverse_frame_2 - 0.022 14.9 0.4 0.025 14.7 0.4 1.0 1 0 0 1 1 1 0 The ARF-like 2 binding protein BART IFT57 PF10498.9 NODE_72326_length_218_cov_1.732240_g64385_i0reverse_frame_2 - 0.029 13.3 2.0 0.034 13.1 2.0 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Fmp27 PF10344.9 NODE_72322_length_218_cov_1.748634_g64381_i0reverse_frame_3 - 0.038 12.1 0.2 0.041 12.0 0.2 1.0 1 0 0 1 1 1 0 Mitochondrial protein from FMP27 TatD_DNase PF01026.21 NODE_72322_length_218_cov_1.748634_g64381_i0forward_frame_3 - 2.9e-08 33.4 0.0 3.4e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase Med11 PF10280.9 NODE_72314_length_218_cov_1.792350_g64373_i0forward_frame_2 - 0.051 14.0 0.1 0.059 13.8 0.1 1.0 1 0 0 1 1 1 0 Mediator complex protein TMEM171 PF15471.6 NODE_72314_length_218_cov_1.792350_g64373_i0forward_frame_2 - 1.1 8.2 5.7 1 8.3 5.7 1.0 1 0 0 1 1 1 0 Transmembrane protein family 171 His_leader PF08047.11 NODE_72311_length_218_cov_1.803279_g64370_i0reverse_frame_2 - 2.2e-08 33.7 20.2 2.2e-08 33.7 20.2 1.6 2 0 0 2 2 2 1 Histidine operon leader peptide NICE-1 PF15845.5 NODE_72307_length_218_cov_1.841530_g64366_i0reverse_frame_3 - 0.034 14.9 3.5 0.044 14.6 3.5 1.2 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family DUF3854 PF12965.7 NODE_72305_length_218_cov_1.879781_g64364_i0forward_frame_2 - 0.076 13.0 0.3 0.084 12.9 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) Toxin_34 PF08396.10 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_3 - 0.021 15.6 0.2 0.023 15.5 0.2 1.1 1 0 0 1 1 1 0 Spider toxin omega agatoxin/Tx1 family zf-C2H2_8 PF15909.5 NODE_72303_length_218_cov_1.907104_g64362_i0reverse_frame_3 - 0.044 14.1 0.2 0.051 13.9 0.2 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon Cyclin_C PF02984.19 NODE_72295_length_218_cov_1.967213_g64354_i0forward_frame_2 - 1.4e-06 28.4 0.0 1.6e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 Cyclin, C-terminal domain Dus PF01207.17 NODE_72294_length_218_cov_2.021858_g64353_i0reverse_frame_2 - 5.4e-05 22.4 0.0 5.8e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) Pkinase PF00069.25 NODE_72290_length_218_cov_2.092896_g64349_i0forward_frame_2 - 1.8e-14 53.8 0.0 1.9e-14 53.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72290_length_218_cov_2.092896_g64349_i0forward_frame_2 - 2.3e-05 23.8 0.0 2.3e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase MARCKS PF02063.17 NODE_72289_length_218_cov_2.109290_g64348_i0forward_frame_2 - 0.39 10.7 1.1 0.43 10.5 1.1 1.0 1 0 0 1 1 1 0 MARCKS family KAAG1 PF15354.6 NODE_72288_length_218_cov_2.120219_g64347_i0forward_frame_3 - 0.0054 17.2 0.0 0.0055 17.2 0.0 1.2 1 0 0 1 1 1 1 Kidney-associated antigen 1 Lamprin PF06403.11 NODE_72287_length_218_cov_2.136612_g64346_i0forward_frame_2 - 0.074 13.0 4.0 0.084 12.8 4.0 1.1 1 0 0 1 1 1 0 Lamprin MukB PF04310.12 NODE_72282_length_218_cov_2.185792_g64341_i0forward_frame_2 - 0.025 14.4 0.1 0.029 14.2 0.1 1.0 1 0 0 1 1 1 0 MukB N-terminal Stm1_N PF09598.10 NODE_72280_length_218_cov_2.202186_g64339_i0reverse_frame_3 - 0.14 13.0 8.5 0.21 12.4 8.5 1.3 1 0 0 1 1 1 0 Stm1 MSSP PF03940.13 NODE_72280_length_218_cov_2.202186_g64339_i0forward_frame_3 - 0.094 12.3 2.9 0.15 11.7 2.9 1.3 1 0 0 1 1 1 0 Male specific sperm protein Tubulin PF00091.25 NODE_72279_length_218_cov_2.229508_g64338_i0reverse_frame_3 - 3.1e-09 37.3 0.0 3.4e-09 37.2 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 NODE_72279_length_218_cov_2.229508_g64338_i0reverse_frame_3 - 1.3e-06 28.7 0.2 1.6e-06 28.5 0.2 1.1 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain EamA PF00892.20 NODE_72276_length_218_cov_2.284153_g64335_i0forward_frame_3 - 6.5e-05 23.1 1.2 6.8e-05 23.1 1.2 1.0 1 0 0 1 1 1 1 EamA-like transporter family Pkinase PF00069.25 NODE_72275_length_218_cov_2.306011_g64334_i0reverse_frame_3 - 1.5e-11 44.2 0.0 1.7e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72275_length_218_cov_2.306011_g64334_i0reverse_frame_3 - 0.00055 19.3 0.0 0.00056 19.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Myb_DNA-binding PF00249.31 NODE_72269_length_218_cov_2.382514_g64328_i0forward_frame_2 - 0.088 13.0 0.8 0.3 11.3 0.9 1.9 1 1 1 2 2 2 0 Myb-like DNA-binding domain Chordopox_A15 PF05846.12 NODE_72268_length_218_cov_2.393443_g64327_i0forward_frame_2 - 0.065 13.5 0.0 0.078 13.2 0.0 1.3 1 0 0 1 1 1 0 Chordopoxvirus A15 protein DUF515 PF04415.12 NODE_72262_length_218_cov_2.590164_g64321_i0forward_frame_2 - 0.39 9.1 1.4 0.42 8.9 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) PUNUT PF16913.5 NODE_72260_length_218_cov_2.606557_g64319_i0forward_frame_3 - 0.16 11.2 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Purine nucleobase transmembrane transport DUF2457 PF10446.9 NODE_72257_length_218_cov_2.715847_g64316_i0reverse_frame_2 - 0.88 8.6 2.2 0.9 8.6 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF4978 PF16349.5 NODE_72256_length_218_cov_2.759563_g64315_i0reverse_frame_2 - 0.11 12.1 0.2 0.13 11.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4978) Vps26 PF03643.15 NODE_72254_length_218_cov_2.775956_g64313_i0reverse_frame_2 - 1.1e-14 54.1 0.1 1.1e-14 54.1 0.1 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 26 EAL PF00563.20 NODE_72249_length_218_cov_3.027322_g64308_i0reverse_frame_3 - 1.1e-18 67.7 0.0 1.1e-18 67.6 0.0 1.0 1 0 0 1 1 1 1 EAL domain Tyr_Deacylase PF02580.16 NODE_72247_length_218_cov_3.109290_g64306_i0reverse_frame_3 - 0.09 13.3 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 D-Tyr-tRNA(Tyr) deacylase TOBE_2 PF08402.10 NODE_72237_length_218_cov_5.360656_g64296_i0reverse_frame_2 - 1e-05 25.6 0.3 7.3e-05 22.9 0.1 1.9 1 1 1 2 2 2 1 TOBE domain OB_MalK PF17912.1 NODE_72237_length_218_cov_5.360656_g64296_i0reverse_frame_2 - 2.4e-05 25.1 0.1 5e-05 24.0 0.0 1.5 2 0 0 2 2 2 1 MalK OB fold domain TOBE PF03459.17 NODE_72237_length_218_cov_5.360656_g64296_i0reverse_frame_2 - 0.02 15.2 0.8 0.094 13.0 0.2 2.1 2 1 0 2 2 2 0 TOBE domain U3snoRNP10 PF12397.8 NODE_72236_length_218_cov_5.448087_g64295_i0forward_frame_2 - 0.086 13.2 0.1 0.1 13.0 0.1 1.1 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 10 PFOR_II PF17147.4 NODE_72233_length_218_cov_6.704918_g64292_i0reverse_frame_3 - 0.12 12.7 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II SPRY PF00622.28 NODE_72231_length_218_cov_20.377049_g64290_i0forward_frame_3 - 0.069 13.3 0.0 0.1 12.7 0.0 1.3 1 1 0 1 1 1 0 SPRY domain Defensin_5 PF18251.1 NODE_72210_length_218_cov_53.601093_g64269_i0forward_frame_2 - 0.084 13.0 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Fungal defensin Copsin Pex2_Pex12 PF04757.14 NODE_72209_length_218_cov_56.704918_g64268_i0reverse_frame_3 - 0.025 14.2 0.7 0.027 14.0 0.7 1.0 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region DUF3381 PF11861.8 NODE_72209_length_218_cov_56.704918_g64268_i0forward_frame_3 - 0.099 12.4 8.3 0.11 12.3 8.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) DUF4628 PF15429.6 NODE_72209_length_218_cov_56.704918_g64268_i0forward_frame_3 - 0.12 12.1 3.5 0.12 12.0 3.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4628) Microtub_bind PF13931.6 NODE_72209_length_218_cov_56.704918_g64268_i0forward_frame_3 - 0.15 12.5 3.4 0.16 12.3 3.4 1.0 1 0 0 1 1 1 0 Kinesin-associated microtubule-binding SID-1_RNA_chan PF13965.6 NODE_72209_length_218_cov_56.704918_g64268_i0forward_frame_3 - 0.7 8.2 2.5 0.68 8.3 2.5 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF4719 PF15843.5 NODE_72206_length_218_cov_60.918033_g64265_i0reverse_frame_3 - 0.084 13.0 0.2 0.088 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) Cation_ATPase_N PF00690.26 NODE_72205_length_218_cov_62.278689_g64264_i0forward_frame_3 - 0.00074 19.2 0.0 0.00081 19.0 0.0 1.2 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase PF00702.26 NODE_72205_length_218_cov_62.278689_g64264_i0forward_frame_2 - 0.12 12.7 0.2 0.17 12.1 0.2 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Adipogenin PF15202.6 NODE_72202_length_218_cov_67.311475_g64261_i0forward_frame_2 - 4.3 7.4 7.6 5 7.2 7.3 1.3 1 1 0 1 1 1 0 Adipogenin TMCO5 PF14992.6 NODE_72202_length_218_cov_67.311475_g64261_i0forward_frame_2 - 5.5 6.5 5.4 5.5 6.5 5.4 1.1 1 0 0 1 1 1 0 TMCO5 family Pacs-1 PF10254.9 NODE_72189_length_218_cov_121.202186_g64248_i0forward_frame_2 - 0.57 9.1 6.6 0.6 9.0 6.6 1.0 1 0 0 1 1 1 0 PACS-1 cytosolic sorting protein SR-25 PF10500.9 NODE_72189_length_218_cov_121.202186_g64248_i0forward_frame_2 - 0.93 9.1 12.0 1 8.9 12.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein PPV_E1_N PF00524.18 NODE_72189_length_218_cov_121.202186_g64248_i0forward_frame_2 - 6.6 7.2 8.1 12 6.3 8.1 1.5 1 1 0 1 1 1 0 E1 Protein, N terminal domain Cyclin_C PF02984.19 NODE_72186_length_218_cov_164.814208_g64245_i0reverse_frame_3 - 0.087 12.9 0.0 0.096 12.8 0.0 1.1 1 0 0 1 1 1 0 Cyclin, C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks340.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks340.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks340.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks340.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FAD_binding_8 PF08022.12 NODE_72181_length_218_cov_465.546448_g64240_i0forward_frame_2 - 0.016 15.3 0.3 0.02 15.0 0.3 1.2 1 0 0 1 1 1 0 FAD-binding domain DSPn PF14671.6 NODE_72179_length_218_cov_2337.169399_g64238_i0forward_frame_3 - 0.031 14.7 0.0 0.038 14.4 0.0 1.2 1 0 0 1 1 1 0 Dual specificity protein phosphatase, N-terminal half DUF3482 PF11981.8 NODE_72177_length_218_cov_30286.273224_g64236_i0forward_frame_3 - 0.043 13.2 9.0 0.052 13.0 9.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Nod1 PF17114.5 NODE_72176_length_218_cov_84312.224044_g64235_i0reverse_frame_3 - 0.24 11.6 2.7 0.29 11.3 2.7 1.0 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 CECR6_TMEM121 PF14997.6 NODE_72176_length_218_cov_84312.224044_g64235_i0reverse_frame_2 - 0.03 14.1 7.7 0.036 13.9 7.7 1.0 1 0 0 1 1 1 0 CECR6/TMEM121 family SSF PF00474.17 NODE_72172_length_219_cov_0.836957_g64231_i0reverse_frame_3 - 0.052 12.4 0.4 0.056 12.3 0.4 1.0 1 0 0 1 1 1 0 Sodium:solute symporter family Glug PF07581.12 NODE_72172_length_219_cov_0.836957_g64231_i0forward_frame_3 - 7.7 7.2 9.6 43 4.8 2.3 3.4 2 1 0 2 2 2 0 The GLUG motif TetR_N PF00440.23 NODE_72170_length_219_cov_0.869565_g64229_i0reverse_frame_2 - 0.18 11.6 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family DotD PF16816.5 NODE_72165_length_219_cov_0.869565_g64224_i0reverse_frame_2 - 0.095 12.7 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 DotD protein INTAP PF16617.5 NODE_72159_length_219_cov_0.869565_g64218_i0reverse_frame_3 - 0.24 11.7 9.2 0.34 11.3 9.3 1.3 1 1 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region DUF1840 PF08895.11 NODE_72156_length_219_cov_0.956522_g64215_i0reverse_frame_3 - 0.076 13.4 0.0 0.098 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) zf-RING_10 PF16685.5 NODE_72155_length_219_cov_0.961957_g64214_i0forward_frame_2 - 0.043 14.0 0.2 0.051 13.7 0.2 1.1 1 0 0 1 1 1 0 zinc RING finger of MSL2 DUF2197 PF09963.9 NODE_72154_length_219_cov_0.972826_g64213_i0reverse_frame_3 - 0.17 12.2 0.7 1.7 8.9 0.4 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) LisH_2 PF16045.5 NODE_72152_length_219_cov_0.994565_g64211_i0reverse_frame_2 - 0.49 9.5 0.1 0.49 9.5 0.1 2.3 3 0 0 3 3 3 0 LisH Pkinase_Tyr PF07714.17 NODE_72152_length_219_cov_0.994565_g64211_i0forward_frame_2 - 4e-09 36.1 0.0 4.6e-09 35.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_72152_length_219_cov_0.994565_g64211_i0forward_frame_2 - 2.2e-08 33.8 0.0 2.2e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 NODE_72152_length_219_cov_0.994565_g64211_i0forward_frame_2 - 0.0026 17.1 0.0 0.0031 16.9 0.0 1.0 1 0 0 1 1 1 1 Kinase-like SID-1_RNA_chan PF13965.6 NODE_72151_length_219_cov_0.994565_g64210_i0forward_frame_2 - 0.019 13.4 4.2 0.021 13.3 4.2 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 PUCC PF03209.15 NODE_72150_length_219_cov_1.000000_g64209_i0forward_frame_3 - 0.044 12.8 0.3 0.046 12.7 0.3 1.0 1 0 0 1 1 1 0 PUCC protein Toxin_18 PF08087.11 NODE_72150_length_219_cov_1.000000_g64209_i0forward_frame_2 - 0.00048 20.0 0.5 0.00085 19.3 0.5 1.3 1 0 0 1 1 1 1 Conotoxin O-superfamily Kelch_6 PF13964.6 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 1.6e-05 25.0 0.5 0.00011 22.3 0.2 2.0 1 1 1 2 2 2 1 Kelch motif Kelch_3 PF13415.6 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 2.3e-05 24.6 1.6 0.00049 20.3 0.3 2.1 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 7.2e-05 22.7 0.7 0.00032 20.6 0.1 1.9 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 0.0021 18.0 0.3 0.0031 17.5 0.3 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 0.0023 17.5 1.3 0.0073 15.9 0.2 2.0 2 0 0 2 2 2 1 Kelch motif PBP_N PF17093.5 NODE_72137_length_219_cov_1.086957_g64196_i0reverse_frame_2 - 0.024 14.9 0.2 0.028 14.7 0.2 1.0 1 0 0 1 1 1 0 Penicillin-binding protein N-terminus Cas_Csm6 PF09659.10 NODE_72135_length_219_cov_1.086957_g64194_i0forward_frame_3 - 0.078 11.7 0.3 0.085 11.6 0.3 1.0 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csm6) RTT107_BRCT_5 PF16770.5 NODE_72135_length_219_cov_1.086957_g64194_i0forward_frame_3 - 0.089 12.7 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain MORN PF02493.20 NODE_72133_length_219_cov_1.097826_g64192_i0reverse_frame_3 - 0.051 13.5 0.2 0.25 11.3 0.0 2.2 2 1 0 2 2 2 0 MORN repeat EF-hand_1 PF00036.32 NODE_72133_length_219_cov_1.097826_g64192_i0reverse_frame_3 - 0.07 12.7 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 EF hand PgaPase_1 PF06162.12 NODE_72133_length_219_cov_1.097826_g64192_i0forward_frame_2 - 0.013 15.3 0.4 0.014 15.1 0.4 1.1 1 0 0 1 1 1 0 Putative pyroglutamyl peptidase PgaPase_1 DUF624 PF04854.14 NODE_72133_length_219_cov_1.097826_g64192_i0forward_frame_2 - 0.018 15.2 5.2 0.15 12.2 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function, DUF624 CENP-N PF05238.13 NODE_72133_length_219_cov_1.097826_g64192_i0forward_frame_2 - 0.036 13.4 0.9 0.039 13.3 0.9 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Abhydrolase_6 PF12697.7 NODE_72127_length_219_cov_1.190217_g64186_i0reverse_frame_2 - 0.064 13.9 1.0 0.068 13.8 1.0 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase family AJAP1_PANP_C PF15298.6 NODE_72127_length_219_cov_1.190217_g64186_i0forward_frame_3 - 0.017 15.4 0.1 0.019 15.2 0.1 1.0 1 0 0 1 1 1 0 AJAP1/PANP C-terminus GGA_N-GAT PF18308.1 NODE_72125_length_219_cov_1.201087_g64184_i0forward_frame_2 - 0.76 9.5 0.2 0.76 9.5 0.2 2.4 3 0 0 3 3 3 0 GGA N-GAT domain SE PF08491.10 NODE_72121_length_219_cov_1.233696_g64180_i0forward_frame_2 - 0.026 13.6 0.1 0.029 13.4 0.1 1.0 1 0 0 1 1 1 0 Squalene epoxidase PFK PF00365.20 NODE_72118_length_219_cov_1.233696_g64177_i0reverse_frame_2 - 7.6e-10 38.6 0.0 8.8e-10 38.4 0.0 1.0 1 0 0 1 1 1 1 Phosphofructokinase CwsA PF10814.8 NODE_72116_length_219_cov_1.250000_g64175_i0forward_frame_2 - 0.064 13.4 0.2 0.064 13.4 0.2 1.1 1 0 0 1 1 1 0 Cell wall synthesis protein CwsA Cortex-I_coil PF09304.10 NODE_72113_length_219_cov_1.282609_g64172_i0forward_frame_3 - 0.022 14.9 0.0 0.025 14.8 0.0 1.1 1 0 0 1 1 1 0 Cortexillin I, coiled coil RGCC PF15151.6 NODE_72112_length_219_cov_1.282609_g64171_i0forward_frame_3 - 0.093 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Response gene to complement 32 protein family Stress-antifung PF01657.17 NODE_72110_length_219_cov_1.293478_g64169_i0reverse_frame_2 - 0.025 15.2 0.7 0.028 15.0 0.7 1.1 1 0 0 1 1 1 0 Salt stress response/antifungal tRNA-synt_1c_C PF03950.18 NODE_72108_length_219_cov_1.298913_g64167_i0reverse_frame_3 - 7.5e-14 52.0 0.0 8e-14 51.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain Rad21_Rec8 PF04824.16 NODE_72108_length_219_cov_1.298913_g64167_i0forward_frame_2 - 0.046 13.0 0.5 0.071 12.4 0.5 1.3 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein Spore_YtfJ PF09579.10 NODE_72098_length_219_cov_1.304348_g64157_i0reverse_frame_3 - 0.13 12.5 0.1 0.16 12.2 0.1 1.2 1 0 0 1 1 1 0 Sporulation protein YtfJ (Spore_YtfJ) Kinesin PF00225.23 NODE_72093_length_219_cov_1.304348_g64152_i0reverse_frame_2 - 3.4e-17 62.4 1.7 3.6e-17 62.3 1.7 1.0 1 0 0 1 1 1 1 Kinesin motor domain Phage_GPO PF05929.11 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.019 14.6 0.1 0.021 14.4 0.1 1.0 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF2756 PF10956.8 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.048 14.2 2.9 0.059 13.9 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2756) Csm1_N PF18504.1 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.097 13.0 3.8 0.096 13.0 1.3 1.9 1 1 1 2 2 2 0 Csm1 N-terminal domain YdaS_antitoxin PF15943.5 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.13 12.1 0.4 0.2 11.6 0.1 1.5 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT ORF6C PF10552.9 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.19 11.8 2.2 0.31 11.1 2.0 1.5 1 1 0 1 1 1 0 ORF6C domain FlaC_arch PF05377.11 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.26 11.7 2.2 1.5 9.3 0.2 2.1 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) TolA_bind_tri PF16331.5 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.3 11.2 11.1 1 9.5 5.7 2.3 1 1 1 2 2 2 0 TolA binding protein trimerisation OppC_N PF12911.7 NODE_72088_length_219_cov_1.331522_g64147_i0reverse_frame_3 - 0.072 13.1 1.3 0.072 13.1 1.3 2.2 2 1 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C DDE_Tnp_1 PF01609.21 NODE_72088_length_219_cov_1.331522_g64147_i0reverse_frame_2 - 0.085 12.5 0.4 0.13 11.9 0.4 1.2 1 1 0 1 1 1 0 Transposase DDE domain Gpr1_Fun34_YaaH PF01184.19 NODE_72088_length_219_cov_1.331522_g64147_i0forward_frame_3 - 0.16 11.5 5.4 0.19 11.3 5.4 1.0 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family DUF43 PF01861.16 NODE_72082_length_219_cov_1.369565_g64141_i0reverse_frame_2 - 0.092 12.0 0.4 0.097 11.9 0.4 1.0 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain PEGSRP PF07623.11 NODE_72081_length_219_cov_1.375000_g64140_i0reverse_frame_3 - 0.04 13.7 2.8 0.2 11.5 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) Phi-29_GP16_7 PF06720.11 NODE_72080_length_219_cov_1.380435_g64139_i0forward_frame_2 - 0.016 15.0 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 Capsid_N PF16903.5 NODE_72075_length_219_cov_1.402174_g64134_i0reverse_frame_3 - 0.065 12.8 0.0 0.068 12.8 0.0 1.0 1 0 0 1 1 1 0 Major capsid protein N-terminus Izumo-Ig PF16706.5 NODE_72075_length_219_cov_1.402174_g64134_i0forward_frame_3 - 0.059 13.4 0.0 0.064 13.3 0.0 1.1 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain SelP_C PF04593.14 NODE_72071_length_219_cov_1.418478_g64130_i0reverse_frame_3 - 0.039 13.9 0.3 0.044 13.8 0.3 1.1 1 0 0 1 1 1 0 Selenoprotein P, C terminal region Mg_trans_NIPA PF05653.14 NODE_72069_length_219_cov_1.418478_g64128_i0reverse_frame_2 - 0.05 12.7 0.1 0.052 12.6 0.1 1.1 1 0 0 1 1 1 0 Magnesium transporter NIPA TMEM100 PF16311.5 NODE_72068_length_219_cov_1.423913_g64127_i0forward_frame_2 - 0.61 9.7 2.3 0.8 9.3 2.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 100 DeoC PF01791.9 NODE_72064_length_219_cov_1.467391_g64123_i0reverse_frame_3 - 1.4e-05 24.8 0.0 1.5e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase RVT_2 PF07727.14 NODE_72061_length_219_cov_1.478261_g64120_i0reverse_frame_2 - 0.14 11.8 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) ATP-synt_A PF00119.20 NODE_72060_length_219_cov_1.483696_g64119_i0reverse_frame_3 - 0.015 15.3 0.0 0.016 15.2 0.0 1.1 1 0 0 1 1 1 0 ATP synthase A chain GFO_IDH_MocA PF01408.22 NODE_72055_length_219_cov_1.505435_g64114_i0reverse_frame_2 - 2.9e-05 24.9 0.1 3.6e-05 24.6 0.1 1.2 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold LRRFIP PF09738.9 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.00027 20.5 3.3 0.00058 19.4 3.3 1.5 1 1 0 1 1 1 1 LRRFIP family BRE1 PF08647.11 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.0022 18.0 2.8 0.0025 17.8 2.8 1.2 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Spore_YhcN_YlaJ PF09580.10 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.034 14.3 0.4 0.035 14.2 0.4 1.1 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DASH_Dad3 PF08656.10 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.094 12.8 4.1 0.15 12.1 4.1 1.3 1 1 0 1 1 1 0 DASH complex subunit Dad3 DUF1664 PF07889.12 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.39 10.7 3.0 0.47 10.5 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DivIC PF04977.15 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.71 9.7 4.9 2.1 8.2 0.3 2.1 1 1 1 2 2 2 0 Septum formation initiator DUF2897 PF11446.8 NODE_72050_length_219_cov_1.527174_g64109_i0forward_frame_2 - 0.9 9.5 3.9 1.9 8.4 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) SPAN PF02510.14 NODE_72045_length_219_cov_1.565217_g64104_i0forward_frame_2 - 0.2 10.8 0.0 0.2 10.8 0.0 1.0 1 0 0 1 1 1 0 Surface presentation of antigens protein DUF5438 PF17506.2 NODE_72042_length_219_cov_1.576087_g64101_i0reverse_frame_2 - 0.061 13.7 0.1 0.12 12.7 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5438) Ferlin_C PF16165.5 NODE_72033_length_219_cov_1.625000_g64092_i0reverse_frame_2 - 7.5 6.5 6.9 7.6 6.5 5.6 1.6 1 1 1 2 2 2 0 Ferlin C-terminus Croc_4 PF17691.1 NODE_72031_length_219_cov_1.630435_g64090_i0reverse_frame_3 - 0.0039 17.2 0.3 0.005 16.9 0.3 1.2 1 0 0 1 1 1 1 Contingent replication of cDNA 4 AAA_12 PF13087.6 NODE_72030_length_219_cov_1.635870_g64089_i0reverse_frame_2 - 0.097 12.3 0.2 0.098 12.3 0.2 1.1 1 0 0 1 1 1 0 AAA domain PDH PF02153.17 NODE_72030_length_219_cov_1.635870_g64089_i0forward_frame_3 - 2.1e-06 27.0 0.0 2.4e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Prephenate dehydrogenase ANAPC5 PF12862.7 NODE_72026_length_219_cov_1.673913_g64085_i0forward_frame_3 - 0.11 12.6 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 5 Pkinase PF00069.25 NODE_72018_length_219_cov_1.733696_g64077_i0forward_frame_3 - 8.4e-06 25.3 0.1 8.4e-06 25.3 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72018_length_219_cov_1.733696_g64077_i0forward_frame_3 - 0.00072 18.9 0.0 0.00076 18.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_72018_length_219_cov_1.733696_g64077_i0forward_frame_2 - 0.00017 21.0 0.0 0.0002 20.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain AAA_12 PF13087.6 NODE_72014_length_219_cov_1.739130_g64073_i0reverse_frame_3 - 1.9e-27 96.2 0.1 2e-27 96.1 0.1 1.0 1 0 0 1 1 1 1 AAA domain OSCP PF00213.18 NODE_72011_length_219_cov_1.739130_g64070_i0reverse_frame_2 - 4.8e-06 26.8 0.1 6e-06 26.5 0.1 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit MORN PF02493.20 NODE_72001_length_219_cov_1.826087_g64060_i0reverse_frame_3 - 1.9e-11 43.1 9.4 6e-06 25.8 2.9 2.6 3 0 0 3 3 3 2 MORN repeat DUF3432 PF11914.8 NODE_72001_length_219_cov_1.826087_g64060_i0forward_frame_2 - 0.079 13.2 2.1 0.11 12.8 0.7 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3432) MMR_HSR1 PF01926.23 NODE_71997_length_219_cov_1.842391_g64056_i0reverse_frame_2 - 1e-05 25.6 0.0 1.1e-05 25.5 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Wound_ind PF08186.11 NODE_71996_length_219_cov_1.847826_g64055_i0forward_frame_2 - 2.8 8.5 4.7 0.93 10.0 1.8 1.7 2 0 0 2 2 2 0 Wound-inducible basic protein family CDC4_D PF16856.5 NODE_71995_length_219_cov_1.858696_g64054_i0forward_frame_3 - 0.52 10.2 2.8 1.6 8.7 0.4 2.2 1 1 1 2 2 2 0 Cell division control protein 4 dimerisation domain IAT_beta PF11924.8 NODE_71983_length_219_cov_1.978261_g64042_i0reverse_frame_2 - 4.1e-12 46.1 0.1 4.6e-12 45.9 0.1 1.0 1 0 0 1 1 1 1 Inverse autotransporter, beta-domain ALG3 PF05208.13 NODE_71981_length_219_cov_2.016304_g64040_i0reverse_frame_2 - 0.0068 15.9 0.0 0.007 15.8 0.0 1.2 1 0 0 1 1 1 1 ALG3 protein RNB PF00773.19 NODE_71976_length_219_cov_2.103261_g64035_i0reverse_frame_2 - 5.5e-08 32.5 0.2 7.8e-08 32.0 0.2 1.2 1 0 0 1 1 1 1 RNB domain DIM PF08194.12 NODE_71975_length_219_cov_2.130435_g64034_i0reverse_frame_3 - 0.033 14.4 0.3 0.055 13.7 0.3 1.4 1 0 0 1 1 1 0 DIM protein Folliculin PF11704.8 NODE_71974_length_219_cov_2.157609_g64033_i0forward_frame_3 - 0.15 11.9 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport Ntox16 PF15523.6 NODE_71973_length_219_cov_2.157609_g64032_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Novel toxin 16 ROK PF00480.20 NODE_71973_length_219_cov_2.157609_g64032_i0reverse_frame_2 - 0.19 11.2 0.2 0.2 11.1 0.2 1.1 1 0 0 1 1 1 0 ROK family DUF4746 PF15928.5 NODE_71970_length_219_cov_2.168478_g64029_i0reverse_frame_3 - 0.02 14.3 0.1 0.022 14.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) RRM_1 PF00076.22 NODE_71969_length_219_cov_2.173913_g64028_i0forward_frame_2 - 2.6e-07 30.3 0.1 5.3e-07 29.4 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 NODE_71969_length_219_cov_2.173913_g64028_i0forward_frame_2 - 0.062 12.9 0.0 0.064 12.8 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 NODE_71969_length_219_cov_2.173913_g64028_i0forward_frame_2 - 0.067 13.2 0.0 0.1 12.7 0.0 1.3 1 1 0 1 1 1 0 RNA binding motif Nup35_RRM_2 PF14605.6 NODE_71969_length_219_cov_2.173913_g64028_i0forward_frame_2 - 0.11 12.5 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Fer4_12 PF13353.6 NODE_71959_length_219_cov_2.380435_g64018_i0forward_frame_3 - 0.095 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF3342 PF11822.8 NODE_71957_length_219_cov_2.391304_g64016_i0reverse_frame_3 - 0.0026 17.9 0.1 0.0041 17.3 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) Prominin PF05478.11 NODE_71957_length_219_cov_2.391304_g64016_i0reverse_frame_3 - 0.055 11.4 0.2 0.06 11.3 0.2 1.0 1 0 0 1 1 1 0 Prominin DDE_3 PF13358.6 NODE_71956_length_219_cov_2.467391_g64015_i0reverse_frame_2 - 4.1e-06 26.6 0.0 4.7e-06 26.4 0.0 1.0 1 0 0 1 1 1 1 DDE superfamily endonuclease Sedlin_N PF04628.13 NODE_71956_length_219_cov_2.467391_g64015_i0reverse_frame_2 - 0.0072 16.4 0.1 0.0081 16.3 0.1 1.0 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region SLT_L PF14718.6 NODE_71945_length_219_cov_3.076087_g64004_i0forward_frame_2 - 0.18 12.0 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 Soluble lytic murein transglycosylase L domain Cornifin PF02389.15 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_3 - 0.00068 19.9 1.0 0.00074 19.7 1.0 1.0 1 0 0 1 1 1 1 Cornifin (SPRR) family RskA PF10099.9 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_3 - 0.024 14.9 4.0 0.026 14.8 4.0 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA SR-25 PF10500.9 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_2 - 0.15 11.7 25.4 0.16 11.5 25.4 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_2 - 0.21 11.9 26.6 0.28 11.5 26.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Pneumo_att_G PF05539.11 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_2 - 0.46 10.0 11.0 0.54 9.8 11.0 1.1 1 0 0 1 1 1 0 Pneumovirinae attachment membrane glycoprotein G DUF4718 PF15842.5 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_2 - 1.6 8.5 9.1 1.8 8.3 9.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) Lin-8 PF03353.15 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_2 - 1.7 8.2 8.1 1.8 8.1 8.1 1.0 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist DUF3511 PF12023.8 NODE_71942_length_219_cov_3.309783_g64001_i0reverse_frame_2 - 0.091 12.6 2.9 0.88 9.4 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3511) TPR_MLP1_2 PF07926.12 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.001 19.1 4.5 0.0011 19.0 4.5 1.0 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein LRS4 PF10422.9 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.0044 16.6 7.3 0.0047 16.5 7.3 1.1 1 0 0 1 1 1 1 Monopolin complex subunit LRS4 Uds1 PF15456.6 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.0053 16.9 2.9 0.007 16.5 2.9 1.2 1 0 0 1 1 1 1 Up-regulated During Septation Cnn_1N PF07989.11 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.0061 16.7 6.6 0.0075 16.4 6.6 1.2 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 BBP1_C PF15272.6 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.0076 16.1 8.4 0.0087 15.9 8.4 1.0 1 0 0 1 1 1 1 Spindle pole body component BBP1, C-terminal Fez1 PF06818.15 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.018 15.5 4.8 0.02 15.4 4.8 1.1 1 0 0 1 1 1 0 Fez1 CREPT PF16566.5 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.026 14.7 2.8 0.031 14.5 2.8 1.2 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour CENP-F_leu_zip PF10473.9 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.026 14.5 5.9 0.38 10.8 5.9 1.9 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cluap1 PF10234.9 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.031 13.7 4.2 0.034 13.5 4.2 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 IFP_35_N PF07334.13 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.068 13.3 0.9 0.068 13.3 0.9 1.6 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF948 PF06103.11 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.089 13.1 0.6 0.11 12.8 0.6 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF4407 PF14362.6 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.14 11.5 2.9 0.14 11.5 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4337 PF14235.6 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.31 11.1 4.2 0.32 11.1 4.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Prefoldin PF02996.17 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.38 10.7 6.5 0.73 9.8 2.0 2.0 1 1 1 2 2 2 0 Prefoldin subunit DUF2205 PF10224.9 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.48 10.5 9.1 0.41 10.7 3.5 2.1 1 1 1 2 2 2 0 Short coiled-coil protein DivIC PF04977.15 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.75 9.6 7.9 0.47 10.3 1.4 2.1 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 1.5 8.0 4.0 1.5 8.0 4.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein MtaB PF12176.8 NODE_71936_length_219_cov_3.826087_g63995_i0reverse_frame_3 - 0.15 10.8 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Methanol-cobalamin methyltransferase B subunit Defensin_int PF17858.1 NODE_71936_length_219_cov_3.826087_g63995_i0reverse_frame_2 - 1 9.4 7.5 0.55 10.3 1.2 2.3 1 1 1 2 2 2 0 Platypus intermediate defensin-like peptide zf-RING_7 PF02591.15 NODE_71933_length_219_cov_4.168478_g63992_i0forward_frame_3 - 0.027 14.6 1.0 3.7 7.8 0.1 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain EspB_PE PF18625.1 NODE_71932_length_219_cov_4.326087_g63991_i0forward_frame_3 - 0.091 13.2 0.1 0.1 13.1 0.1 1.3 1 0 0 1 1 1 0 ESX-1 secreted protein B PE domain Pkinase PF00069.25 NODE_71927_length_219_cov_14.423913_g63986_i0forward_frame_2 - 1.2e-05 24.9 0.0 1.2e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain S-antigen PF05756.11 NODE_71925_length_219_cov_15.853261_g63984_i0reverse_frame_3 - 0.2 12.1 5.3 0.28 11.6 5.3 1.3 1 0 0 1 1 1 0 S-antigen protein DLEU7 PF15760.5 NODE_71925_length_219_cov_15.853261_g63984_i0reverse_frame_3 - 2.4 7.6 6.0 2.7 7.5 6.0 1.1 1 0 0 1 1 1 0 Leukemia-associated protein 7 Ax_dynein_light PF10211.9 NODE_71925_length_219_cov_15.853261_g63984_i0reverse_frame_3 - 4.5 7.2 15.1 5 7.0 15.1 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain RseC_MucC PF04246.12 NODE_71925_length_219_cov_15.853261_g63984_i0forward_frame_2 - 9 6.3 7.5 10 6.1 7.5 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Enolase_C PF00113.22 NODE_71921_length_219_cov_21.081522_g63980_i0reverse_frame_3 - 2.1e-06 27.2 0.0 2.2e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain DUF1599 PF07659.11 NODE_71919_length_219_cov_31.516304_g63978_i0reverse_frame_3 - 0.0098 16.3 0.6 0.011 16.2 0.6 1.3 1 0 0 1 1 1 1 Nucleotide modification associated domain 1 Tox-MPTase4 PF15640.6 NODE_71914_length_219_cov_34.070652_g63973_i0reverse_frame_3 - 0.094 12.6 4.6 0.097 12.6 4.6 1.1 1 0 0 1 1 1 0 Metallopeptidase toxin 4 FmdE PF02663.14 NODE_71914_length_219_cov_34.070652_g63973_i0reverse_frame_3 - 1.2 9.2 4.3 1.3 9.1 4.3 1.1 1 0 0 1 1 1 0 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Lar_restr_allev PF14354.6 NODE_71910_length_219_cov_37.603261_g63969_i0reverse_frame_3 - 0.0048 17.3 1.4 0.0059 17.0 1.4 1.1 1 0 0 1 1 1 1 Restriction alleviation protein Lar BSD PF03909.17 NODE_71910_length_219_cov_37.603261_g63969_i0reverse_frame_2 - 8.7e-10 38.5 0.0 1.1e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 BSD domain PQ-loop PF04193.14 NODE_71910_length_219_cov_37.603261_g63969_i0forward_frame_3 - 0.053 13.3 0.1 0.078 12.8 0.1 1.3 1 0 0 1 1 1 0 PQ loop repeat CreD PF06123.12 NODE_71908_length_219_cov_38.070652_g63967_i0reverse_frame_3 - 0.86 8.3 6.9 0.83 8.4 6.9 1.1 1 0 0 1 1 1 0 Inner membrane protein CreD DUF3437 PF11919.8 NODE_71908_length_219_cov_38.070652_g63967_i0forward_frame_2 - 0.0073 16.2 0.1 0.0086 16.0 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3437) RAWUL PF16207.5 NODE_71907_length_219_cov_39.701087_g63966_i0forward_frame_2 - 0.12 13.1 0.7 0.18 12.5 0.7 1.3 1 0 0 1 1 1 0 RAWUL domain RING finger- and WD40-associated ubiquitin-like DUF1672 PF07901.11 NODE_71904_length_219_cov_40.951087_g63963_i0reverse_frame_2 - 0.19 11.0 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1672) W2 PF02020.18 NODE_71903_length_219_cov_40.961957_g63962_i0reverse_frame_3 - 0.027 14.6 0.1 0.031 14.4 0.1 1.2 1 0 0 1 1 1 0 eIF4-gamma/eIF5/eIF2-epsilon GNAT_like PF18407.1 NODE_71902_length_219_cov_42.054348_g63961_i0reverse_frame_2 - 0.029 14.7 0.2 0.034 14.5 0.2 1.2 1 0 0 1 1 1 0 GCN5-related N-acetyltransferase like domain HMG_box_2 PF09011.10 NODE_71898_length_219_cov_44.369565_g63957_i0reverse_frame_3 - 0.00051 20.6 0.0 0.00051 20.6 0.0 1.6 2 0 0 2 2 2 1 HMG-box domain HMG_box PF00505.19 NODE_71898_length_219_cov_44.369565_g63957_i0reverse_frame_3 - 0.0011 19.4 0.3 0.0011 19.4 0.3 1.7 2 0 0 2 2 2 1 HMG (high mobility group) box IL17 PF06083.11 NODE_71896_length_219_cov_48.125000_g63955_i0reverse_frame_2 - 0.06 13.8 0.2 0.072 13.6 0.2 1.2 1 0 0 1 1 1 0 Interleukin-17 Sec7_N PF12783.7 NODE_71890_length_219_cov_57.684783_g63949_i0reverse_frame_3 - 0.029 14.3 1.7 0.031 14.2 1.7 1.0 1 0 0 1 1 1 0 Guanine nucleotide exchange factor in Golgi transport N-terminal FeoB_associated PF12669.7 NODE_71890_length_219_cov_57.684783_g63949_i0forward_frame_3 - 0.018 15.4 1.1 0.038 14.4 1.1 1.5 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein TRAP-gamma PF07074.12 NODE_71890_length_219_cov_57.684783_g63949_i0forward_frame_2 - 0.071 12.7 0.1 0.077 12.5 0.1 1.1 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) CPBP PF02517.16 NODE_71883_length_219_cov_67.875000_g63942_i0forward_frame_2 - 0.067 13.6 2.4 0.074 13.4 2.4 1.2 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease zf-rbx1 PF12678.7 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 5e-07 29.9 0.0 6e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 1.6e-06 28.3 0.0 2.1e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.00012 21.7 0.0 0.00058 19.6 0.0 1.9 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.00014 21.6 0.0 0.00019 21.2 0.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.00062 19.6 0.0 0.00082 19.2 0.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.0021 17.7 0.1 0.0027 17.3 0.1 1.1 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.0036 17.3 0.0 0.0053 16.8 0.0 1.3 1 0 0 1 1 1 1 RING-type zinc-finger Gp138_N PF18352.1 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.029 14.4 0.0 0.036 14.1 0.0 1.1 1 0 0 1 1 1 0 Phage protein Gp138 N-terminal domain Prok-RING_4 PF14447.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.029 14.2 0.0 0.041 13.8 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.043 13.9 0.0 0.049 13.7 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Rtf2 PF04641.12 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.048 13.0 0.0 0.053 12.9 0.0 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger zf-RING_5 PF14634.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.12 12.3 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 zinc-RING finger domain zf-Nse PF11789.8 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.15 11.9 0.1 0.24 11.2 0.1 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit BRD4_CDT PF17105.5 NODE_71878_length_219_cov_77.679348_g63937_i0reverse_frame_3 - 0.028 14.0 0.6 0.081 12.5 0.0 1.8 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 DUF1138 PF06592.13 NODE_71878_length_219_cov_77.679348_g63937_i0reverse_frame_2 - 0.13 12.3 0.3 0.16 12.0 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1138) DUF4606 PF15379.6 NODE_71874_length_219_cov_86.478261_g63933_i0forward_frame_2 - 0.0051 17.0 0.0 0.0057 16.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4606) DUF3716 PF12511.8 NODE_71872_length_219_cov_90.717391_g63931_i0reverse_frame_2 - 0.0078 16.2 0.2 0.014 15.4 0.2 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3716) Thyroglob_assoc PF16597.5 NODE_71871_length_219_cov_90.739130_g63930_i0reverse_frame_3 - 0.021 15.1 0.2 0.034 14.5 0.2 1.3 1 0 0 1 1 1 0 Thyroglobulin_1 repeat associated disordered domain RXT2_N PF08595.11 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.01 15.9 13.4 0.012 15.6 13.4 1.0 1 0 0 1 1 1 1 RXT2-like, N-terminal FAM176 PF14851.6 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.048 13.3 9.1 0.06 13.0 9.1 1.2 1 0 0 1 1 1 0 FAM176 family Pox_Ag35 PF03286.14 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.076 12.8 10.0 0.09 12.6 10.0 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF2457 PF10446.9 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.091 11.9 22.3 0.093 11.9 22.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) NOA36 PF06524.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.16 11.2 20.8 0.18 11.1 20.8 1.1 1 0 0 1 1 1 0 NOA36 protein Rhabdo_ncap PF00945.18 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.21 10.4 7.7 0.22 10.4 7.7 1.0 1 0 0 1 1 1 0 Rhabdovirus nucleocapsid protein Afi1 PF07792.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.29 11.6 9.7 0.29 11.6 9.7 1.0 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking Cwf_Cwc_15 PF04889.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.29 10.8 20.9 0.29 10.8 20.9 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DNA_pol_phi PF04931.13 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.67 8.0 20.3 0.7 7.9 20.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.68 8.1 15.1 0.7 8.0 15.1 1.0 1 0 0 1 1 1 0 Nop14-like family DUF688 PF05097.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.83 8.8 7.7 0.96 8.5 7.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF688) CDC45 PF02724.14 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.98 7.6 12.7 1 7.6 12.7 1.0 1 0 0 1 1 1 0 CDC45-like protein RPN2_C PF18004.1 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 1.1 9.1 6.7 1.3 8.9 6.7 1.0 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain TRAP_alpha PF03896.16 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 1.2 8.3 9.0 1.2 8.2 9.0 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit BUD22 PF09073.10 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 1.6 7.9 12.6 1.7 7.9 12.6 1.0 1 0 0 1 1 1 0 BUD22 CENP-B_dimeris PF09026.10 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 2.4 8.6 24.9 3.1 8.3 24.9 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DUF1168 PF06658.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 2.4 8.0 11.0 2.8 7.8 11.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) FYDLN_acid PF09538.10 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 2.5 8.8 19.0 2.7 8.7 19.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) DUF5520 PF17658.1 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 3.4 6.7 7.6 3.7 6.6 7.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5520) AIM3 PF17096.5 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 3.8 8.5 6.6 5 8.1 6.6 1.2 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 Tom22 PF04281.13 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 5 6.9 9.7 5.6 6.8 9.7 1.1 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 Sigma70_ner PF04546.13 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 8.2 6.2 15.0 9.4 6.1 15.0 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region DUF4637 PF15470.6 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 9.2 6.0 9.7 11 5.7 9.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF3446 PF11928.8 NODE_71870_length_219_cov_92.073826_g63929_i0forward_frame_3 - 0.044 14.1 15.4 0.052 13.9 15.4 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain DUF1117 PF06547.12 NODE_71870_length_219_cov_92.073826_g63929_i0forward_frame_3 - 1.9 9.0 7.7 2.3 8.8 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) DUF1700 PF08006.11 NODE_71870_length_219_cov_92.073826_g63929_i0forward_frame_2 - 2.4 7.7 17.6 2.6 7.5 17.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Hum_adeno_E3A PF05393.11 NODE_71868_length_219_cov_97.467391_g63927_i0reverse_frame_2 - 0.033 14.2 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein Myelin_PLP PF01275.19 NODE_71867_length_219_cov_108.722826_g63926_i0reverse_frame_2 - 3.2 7.6 9.9 3.5 7.4 9.9 1.1 1 0 0 1 1 1 0 Myelin proteolipid protein (PLP or lipophilin) Pox_RNA_Pol_19 PF05320.12 NODE_71867_length_219_cov_108.722826_g63926_i0forward_frame_3 - 0.047 13.7 10.8 0.052 13.5 10.8 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit DUF4811 PF16069.5 NODE_71865_length_219_cov_120.570652_g63924_i0forward_frame_2 - 0.0078 16.1 0.9 0.0086 16.0 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4811) Pacs-1 PF10254.9 NODE_71865_length_219_cov_120.570652_g63924_i0forward_frame_2 - 0.93 8.4 6.4 0.91 8.4 6.4 1.0 1 0 0 1 1 1 0 PACS-1 cytosolic sorting protein Fer4_2 PF12797.7 NODE_71860_length_219_cov_141.271739_g63919_i0forward_frame_2 - 0.04 14.0 2.4 0.059 13.5 2.4 1.3 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_71860_length_219_cov_141.271739_g63919_i0forward_frame_2 - 0.072 13.2 2.0 0.11 12.6 2.0 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain Phospholip_A2_3 PF09056.11 NODE_71855_length_219_cov_165.907609_g63914_i0forward_frame_3 - 0.09 13.4 0.3 0.14 12.8 0.3 1.3 1 0 0 1 1 1 0 Prokaryotic phospholipase A2 DUF4691 PF15762.5 NODE_71853_length_219_cov_202.701087_g63912_i0forward_frame_2 - 0.0087 16.2 1.9 0.0096 16.1 1.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4691) zn-ribbon_14 PF16503.5 NODE_71850_length_219_cov_457.701087_g63909_i0forward_frame_3 - 0.071 12.6 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 Zinc-ribbon DUF92 PF01940.16 NODE_71849_length_219_cov_473.364130_g63908_i0forward_frame_2 - 0.087 12.2 0.4 0.09 12.2 0.4 1.0 1 0 0 1 1 1 0 Integral membrane protein DUF92 UL141 PF16758.5 ORF99915 - 0.0056 16.4 0.5 0.0056 16.4 0.5 1.0 1 0 0 1 1 1 1 Herpes-like virus membrane glycoprotein UL141 Sigma_1s PF02454.16 ORF9976 - 0.039 13.9 2.4 0.04 13.9 2.4 1.1 1 0 0 1 1 1 0 Sigma 1s protein TraG-D_C PF12696.7 ORF99737 - 0.29 11.1 3.0 0.32 11.0 3.0 1.1 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG Xol-1_GHMP-like PF09109.10 ORF99664 - 0.47 10.3 3.5 3.1 7.7 3.5 1.9 1 1 0 1 1 1 0 Switch protein XOL-1, GHMP-like CDC24_OB3 PF17244.2 ORF99244 - 0.07 12.8 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Diphthamide_syn PF01866.17 ORF98843 - 0.11 11.9 1.1 0.12 11.8 1.1 1.1 1 0 0 1 1 1 0 Putative diphthamide synthesis protein PAD_M PF08527.10 ORF98843 - 0.26 11.0 2.0 0.26 10.9 2.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain DUF4716 PF15837.5 ORF9854 - 0.2 11.7 4.0 0.18 11.9 3.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4716) ER PF01133.17 ORF98178 - 1.1e-22 79.9 0.1 1.2e-22 79.7 0.1 1.0 1 0 0 1 1 1 1 Enhancer of rudimentary Imm6 PF14434.6 ORF98178 - 0.032 14.2 0.0 0.047 13.6 0.0 1.4 1 1 0 1 1 1 0 Immunity protein Imm6 RIIa PF02197.17 ORF98153 - 1.4e-07 31.0 0.0 2e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit DUF4522 PF15022.6 ORF97608 - 0.014 15.7 1.5 0.015 15.5 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) K-cyclin_vir_C PF09080.10 ORF97223 - 0.14 12.5 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 K cyclin, C terminal STAG PF08514.11 ORF96829 - 0.11 12.4 0.7 0.13 12.2 0.7 1.2 1 0 0 1 1 1 0 STAG domain YlbE PF14003.6 ORF96513 - 0.098 13.1 0.1 0.22 12.0 0.0 1.6 2 0 0 2 2 2 0 YlbE-like protein Clp_N PF02861.20 ORF96131 - 0.14 12.3 0.1 0.14 12.3 0.1 1.7 2 0 0 2 2 2 0 Clp amino terminal domain, pathogenicity island component # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks341.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks341.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks341.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks341.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:08:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF787 PF05619.11 ORF9541 - 0.027 13.6 0.1 0.031 13.4 0.1 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF787) DUF805 PF05656.14 ORF94822 - 3.7 8.0 6.5 4.7 7.7 6.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF805) UBM PF14377.6 ORF94490 - 0.041 13.3 0.0 0.074 12.5 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin binding region ERbeta_N PF12497.8 ORF93816 - 0.086 12.6 0.7 3.6 7.4 0.1 2.2 1 1 1 2 2 2 0 Estrogen receptor beta TMEM95 PF15203.6 ORF93616 - 0.065 12.9 0.0 0.068 12.8 0.0 1.1 1 0 0 1 1 1 0 TMEM95 family GDNF PF02351.16 ORF92692 - 0.0013 19.7 0.9 0.0016 19.4 0.9 1.1 1 0 0 1 1 1 1 GDNF/GAS1 domain Prominin PF05478.11 ORF92692 - 0.028 12.4 0.0 0.028 12.4 0.0 1.0 1 0 0 1 1 1 0 Prominin APC_u13 PF16634.5 ORF92344 - 0.05 13.5 0.0 0.067 13.1 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on APC between APC_crr and SAMP Exc PF07825.11 ORF92119 - 7.8e-41 137.9 0.8 8.5e-41 137.8 0.8 1.0 1 0 0 1 1 1 1 Excisionase-like protein HTH_17 PF12728.7 ORF92119 - 0.02 15.1 0.0 0.042 14.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DSPc PF00782.20 ORF92116 - 0.0022 17.8 0.0 0.0024 17.7 0.0 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Syntaphilin PF15290.6 ORF916 - 2.3 7.8 3.4 2.6 7.6 3.4 1.0 1 0 0 1 1 1 0 Golgi-localised syntaxin-1-binding clamp RIIa PF02197.17 ORF91381 - 1.4e-07 31.0 0.0 2e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit Ad_cyc_g-alpha PF08509.11 ORF90481 - 0.014 15.1 3.0 0.09 12.5 0.7 2.1 2 0 0 2 2 2 0 Adenylate cyclase G-alpha binding domain HSDR_N PF04313.14 ORF90358 - 0.039 13.9 0.2 0.04 13.9 0.2 1.1 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) Aldedh PF00171.22 ORF90173 - 1.7e-14 53.2 2.0 1.7e-14 53.2 2.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Sugar_tr PF00083.24 ORF89763 - 0.013 14.3 0.0 0.015 14.2 0.0 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter CDC24_OB3 PF17244.2 ORF89508 - 0.099 12.3 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Fer4_2 PF12797.7 ORF8948 - 9.6 6.5 14.9 3.9 7.8 0.3 2.7 3 0 0 3 3 3 0 4Fe-4S binding domain Ish1 PF10281.9 ORF89077 - 0.0035 17.6 3.2 0.27 11.6 1.9 2.2 2 0 0 2 2 2 2 Putative stress-responsive nuclear envelope protein PnpCD_PnpD_N PF18191.1 ORF8905 - 0.12 11.9 0.2 0.12 11.9 0.2 1.1 1 0 0 1 1 1 0 Hydroquinone 1,2-dioxygenase large subunit N-terminal Gtr1_RagA PF04670.12 ORF88837 - 0.12 11.7 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Muskelin_N PF06588.11 ORF88550 - 0.13 12.1 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Muskelin N-terminus Na_trans_cytopl PF11933.8 ORF88384 - 0.0077 16.1 0.5 0.0081 16.0 0.5 1.1 1 0 0 1 1 1 1 Cytoplasmic domain of voltage-gated Na+ ion channel DUF5558 PF17713.1 ORF88306 - 0.025 15.0 0.4 0.028 14.8 0.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5558) APOBEC2 PF18772.1 ORF88009 - 0.043 13.9 0.3 0.043 13.9 0.3 1.1 1 0 0 1 1 1 0 APOBEC2 Herpes_UL7 PF01677.16 ORF87959 - 0.094 12.4 0.1 0.096 12.4 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus UL7 like Peptidase_M1 PF01433.20 ORF8783 - 0.0048 16.5 0.0 0.0051 16.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M1 domain DUF4529 PF15032.6 ORF87807 - 0.085 12.0 0.1 0.089 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) MFS_2 PF13347.6 ORF87603 - 4e-09 35.5 2.3 4.3e-09 35.4 2.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Muskelin_N PF06588.11 ORF87601 - 0.13 12.1 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Muskelin N-terminus DUF3487 PF11990.8 ORF87497 - 0.38 10.7 2.2 0.43 10.5 1.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3487) DUF3675 PF12428.8 ORF87479 - 0.089 13.4 0.6 0.13 12.9 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3675) PARP PF00644.20 ORF87322 - 1e-05 25.2 0.3 0.0062 16.1 0.5 2.0 1 1 1 2 2 2 2 Poly(ADP-ribose) polymerase catalytic domain UPF0561 PF10573.9 ORF86749 - 0.079 13.1 1.2 0.084 13.0 1.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 DUF1322 PF07032.11 ORF86580 - 0.0055 17.2 3.1 0.0074 16.8 2.7 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1322) DUF4853 PF16145.5 ORF86580 - 0.15 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4853) AKNA PF12443.8 ORF86296 - 0.0057 17.3 0.0 0.0074 16.9 0.0 1.1 1 0 0 1 1 1 1 AT-hook-containing transcription factor Phage_portal PF04860.12 ORF86296 - 0.022 14.0 0.1 0.023 13.9 0.1 1.0 1 0 0 1 1 1 0 Phage portal protein CbiQ PF02361.16 ORF86201 - 0.52 9.9 6.0 0.55 9.8 6.0 1.0 1 0 0 1 1 1 0 Cobalt transport protein Kringle PF00051.18 ORF85611 - 0.084 13.2 0.0 0.096 13.0 0.0 1.1 1 0 0 1 1 1 0 Kringle domain TT_ORF2 PF02957.15 ORF85250 - 0.19 12.6 1.1 0.24 12.3 1.1 1.1 1 0 0 1 1 1 0 TT viral ORF2 Barwin PF00967.17 ORF84510 - 0.13 12.1 1.6 0.15 11.9 1.6 1.1 1 0 0 1 1 1 0 Barwin family MatK_N PF01824.18 ORF84502 - 0.13 11.8 4.1 0.15 11.7 4.1 1.0 1 0 0 1 1 1 0 MatK/TrnK amino terminal region PPP5 PF08321.12 ORF84450 - 0.094 13.0 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 PPP5 TPR repeat region zf-LITAF-like PF10601.9 ORF84235 - 1.8e-10 40.9 10.0 2e-10 40.7 10.0 1.0 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Acetyltransf_1 PF00583.25 ORF83909 - 0.0012 19.1 0.1 0.0014 18.9 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 ORF83909 - 0.0022 18.7 0.1 0.0025 18.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF83909 - 0.0086 16.0 0.1 0.01 15.8 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF83909 - 0.02 15.0 0.1 0.023 14.8 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Zwilch PF09817.9 ORF83904 - 0.0037 15.8 0.0 0.0042 15.6 0.0 1.0 1 0 0 1 1 1 1 RZZ complex, subunit zwilch Mpv17_PMP22 PF04117.12 ORF83894 - 1.7e-06 28.2 1.5 2e-06 27.9 1.5 1.1 1 0 0 1 1 1 1 Mpv17 / PMP22 family CvfB_WH PF17783.1 ORF83541 - 0.15 11.9 0.1 0.39 10.6 0.1 1.8 1 1 0 1 1 1 0 CvfB-like winged helix domain Pkinase PF00069.25 ORF83175 - 8.1e-14 51.6 0.2 8.5e-14 51.5 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83175 - 1.3e-08 34.5 0.1 1.3e-08 34.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase MORN PF02493.20 ORF82838 - 4.3e-13 48.3 17.2 9.2e-07 28.4 1.5 3.2 3 0 0 3 3 3 3 MORN repeat UPF0086 PF01868.16 ORF82621 - 5e-11 42.4 0.0 5e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function UPF0086 zf-C2H2 PF00096.26 ORF82307 - 1.3e-10 41.1 14.8 1.1e-05 25.7 3.7 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF82307 - 1.9e-07 31.3 12.3 0.00075 20.1 3.3 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF82307 - 1.8e-06 28.1 10.6 0.012 16.1 0.4 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-met PF12874.7 ORF82307 - 3.6e-05 24.0 8.3 0.056 13.9 3.2 2.2 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF82307 - 0.0034 17.1 5.8 0.026 14.3 0.5 2.2 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-H2C2_5 PF13909.6 ORF82307 - 0.0038 16.9 3.8 0.0038 16.9 3.8 3.0 3 0 0 3 3 3 1 C2H2-type zinc-finger domain C1_1 PF00130.22 ORF82307 - 0.0079 16.1 1.4 0.016 15.1 1.4 1.6 1 1 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2H2_jaz PF12171.8 ORF82307 - 0.034 14.4 10.4 1.6 9.1 0.2 2.4 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-BED PF02892.15 ORF82307 - 0.037 14.0 10.3 0.29 11.2 2.3 2.4 1 1 1 2 2 2 0 BED zinc finger Zn-ribbon_8 PF09723.10 ORF82307 - 0.11 12.7 3.0 2.2 8.5 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF82307 - 0.3 11.1 7.7 1.2 9.2 7.7 1.9 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zf-C2HE PF16278.5 ORF82307 - 0.41 11.1 5.9 0.17 12.3 2.6 1.9 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Evr1_Alr PF04777.13 ORF82307 - 0.45 11.0 3.3 9.9 6.7 0.3 2.1 1 1 1 2 2 2 0 Erv1 / Alr family C1_4 PF07975.12 ORF82307 - 0.49 10.7 6.5 1.2 9.4 1.5 2.1 1 1 1 2 2 2 0 TFIIH C1-like domain zf-C2H2_6 PF13912.6 ORF82307 - 0.66 10.0 5.7 3.7 7.7 1.9 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger DUF629 PF04780.12 ORF82307 - 2.7 6.4 5.9 8.9 4.7 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF629) FlaF PF07309.11 ORF82033 - 0.1 12.6 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Flagellar protein FlaF DUF5520 PF17658.1 ORF81627 - 0.043 12.9 0.0 0.047 12.8 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5520) Tcell_CD4_C PF12104.8 ORF81509 - 0.042 13.8 0.0 0.062 13.2 0.0 1.3 1 0 0 1 1 1 0 T cell CD4 receptor C terminal region Endosulfine PF04667.17 ORF81342 - 0.002 18.2 1.9 0.0024 18.0 1.9 1.2 1 0 0 1 1 1 1 cAMP-regulated phosphoprotein/endosulfine conserved region CDC24_OB3 PF17244.2 ORF8128 - 0.07 12.8 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 CDC24_OB3 PF17244.2 ORF80646 - 0.07 12.8 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 DUF2873 PF11395.8 ORF80644 - 0.11 12.3 1.3 0.15 11.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2873) CHDNT PF08073.12 ORF80633 - 4.9 7.2 7.8 3 7.9 3.4 2.3 2 1 0 2 2 2 0 CHDNT (NUC034) domain RGS-like PF09128.11 ORF80121 - 0.051 13.3 0.3 0.06 13.1 0.3 1.1 1 0 0 1 1 1 0 Regulator of G protein signalling-like domain zf-C2HC_2 PF13913.6 ORF80097 - 0.049 13.6 0.1 0.084 12.8 0.1 1.4 1 0 0 1 1 1 0 zinc-finger of a C2HC-type SDF PF00375.18 ORF79977 - 0.14 11.1 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family Spt46 PF17734.1 ORF79438 - 0.14 11.9 0.2 0.17 11.6 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 Glyco_hydro_2_C PF02836.17 ORF78994 - 4.9e-13 48.8 0.0 5.3e-13 48.7 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain DUF2270 PF10028.9 ORF78591 - 0.26 10.9 1.8 0.34 10.5 1.8 1.3 1 1 0 1 1 1 0 Predicted integral membrane protein (DUF2270) MR_MLE_C PF13378.6 ORF78305 - 0.0079 15.8 0.0 0.0085 15.7 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like SOAR PF16533.5 ORF78102 - 0.025 14.5 0.6 0.032 14.2 0.6 1.1 1 0 0 1 1 1 0 STIM1 Orai1-activating region HTH_AraC PF00165.23 ORF77483 - 0.043 13.9 0.0 0.07 13.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family Sigma_reg_N PF13800.6 ORF77398 - 0.083 13.2 0.1 0.096 13.0 0.1 1.1 1 0 0 1 1 1 0 Sigma factor regulator N-terminal Plasmid_parti PF01672.16 ORF77197 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein UPF0016 PF01169.19 ORF76997 - 3.6e-14 52.9 5.5 4e-14 52.7 5.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0016 DUF2530 PF10745.9 ORF76997 - 0.24 11.6 2.8 0.31 11.3 2.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) Plasmid_parti PF01672.16 ORF76835 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein DUF4787 PF16029.5 ORF76116 - 0.0031 17.6 0.5 0.0039 17.3 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4787) Pkinase PF00069.25 ORF75451 - 9e-26 90.8 0.1 9.3e-26 90.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF75451 - 2.1e-09 37.0 0.0 2.2e-09 37.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Seadorna_VP7 PF07387.11 ORF75451 - 0.00078 18.6 0.1 0.00078 18.6 0.1 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pkinase_fungal PF17667.1 ORF75451 - 0.0013 17.6 0.0 0.0013 17.6 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Choline_kinase PF01633.20 ORF75451 - 0.0039 16.8 0.1 0.0046 16.6 0.1 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 ORF75451 - 0.0054 16.7 0.0 0.0066 16.4 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF75451 - 0.011 15.1 0.1 0.012 15.0 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF75451 - 0.027 13.4 0.0 0.029 13.3 0.0 1.0 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF75451 - 0.11 11.8 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Kinase-like DUF5527 PF17665.1 ORF75190 - 0.08 12.5 0.1 0.08 12.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5527) TraG-D_C PF12696.7 ORF74802 - 0.29 11.1 3.0 0.32 11.0 3.0 1.1 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG DUF5427 PF10310.9 ORF74171 - 0.13 11.2 0.2 0.15 11.0 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5427) Kelch_1 PF01344.25 ORF73841 - 3.7e-06 26.4 0.0 6e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 ORF73841 - 0.00013 21.9 0.0 0.00021 21.2 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF73841 - 0.018 15.0 0.1 0.027 14.4 0.1 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_6 PF13964.6 ORF73841 - 0.021 15.1 0.6 0.064 13.6 0.6 1.7 1 1 0 1 1 1 0 Kelch motif Kelch_2 PF07646.15 ORF73841 - 0.027 14.4 1.6 0.16 12.0 1.6 2.1 1 1 0 1 1 1 0 Kelch motif Kelch_3 PF13415.6 ORF73841 - 0.034 14.4 0.0 0.051 13.9 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain DUF4010 PF13194.6 ORF73631 - 0.024 14.3 0.1 0.024 14.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4010) Ldl_recept_b PF00058.17 ORF73125 - 0.056 13.9 0.2 0.66 10.5 0.0 2.3 2 1 0 2 2 2 0 Low-density lipoprotein receptor repeat class B CAMSAP_CKK PF08683.11 ORF72711 - 0.021 15.0 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 Microtubule-binding calmodulin-regulated spectrin-associated HTH_29 PF13551.6 ORF72711 - 0.08 13.0 0.4 0.088 12.8 0.4 1.3 1 1 0 1 1 1 0 Winged helix-turn helix Ribosomal_L44 PF00935.19 ORF72605 - 3e-20 72.4 7.6 3.6e-20 72.2 7.6 1.1 1 0 0 1 1 1 1 Ribosomal protein L44 YfdX PF10938.8 ORF72305 - 4e-21 75.5 0.6 4.3e-21 75.4 0.6 1.0 1 0 0 1 1 1 1 YfdX protein EAR PF07897.11 ORF7228 - 5.8 6.6 8.8 0.37 10.5 0.4 2.5 2 1 0 2 2 2 0 Ethylene-responsive binding factor-associated repression zf-C2H2 PF00096.26 ORF71722 - 1.3e-10 41.1 14.8 1.1e-05 25.7 3.7 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF71722 - 1.9e-07 31.3 12.3 0.00075 20.1 3.3 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF71722 - 1.8e-06 28.1 10.6 0.012 16.1 0.4 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-met PF12874.7 ORF71722 - 3.6e-05 24.0 8.3 0.056 13.9 3.2 2.2 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF71722 - 0.0034 17.1 5.8 0.026 14.3 0.5 2.2 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-H2C2_5 PF13909.6 ORF71722 - 0.0038 16.9 3.8 0.0038 16.9 3.8 3.0 3 0 0 3 3 3 1 C2H2-type zinc-finger domain C1_1 PF00130.22 ORF71722 - 0.0079 16.1 1.4 0.016 15.1 1.4 1.6 1 1 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2H2_jaz PF12171.8 ORF71722 - 0.034 14.4 10.4 1.6 9.1 0.2 2.4 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-BED PF02892.15 ORF71722 - 0.037 14.0 10.3 0.29 11.2 2.3 2.4 1 1 1 2 2 2 0 BED zinc finger Zn-ribbon_8 PF09723.10 ORF71722 - 0.11 12.7 3.0 2.2 8.5 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF71722 - 0.3 11.1 7.7 1.2 9.2 7.7 1.9 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zf-C2HE PF16278.5 ORF71722 - 0.41 11.1 5.9 0.17 12.3 2.6 1.9 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Evr1_Alr PF04777.13 ORF71722 - 0.45 11.0 3.3 9.9 6.7 0.3 2.1 1 1 1 2 2 2 0 Erv1 / Alr family C1_4 PF07975.12 ORF71722 - 0.49 10.7 6.5 1.2 9.4 1.5 2.1 1 1 1 2 2 2 0 TFIIH C1-like domain zf-C2H2_6 PF13912.6 ORF71722 - 0.66 10.0 5.7 3.7 7.7 1.9 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger DUF629 PF04780.12 ORF71722 - 2.7 6.4 5.9 8.9 4.7 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF629) DUF2737 PF10930.8 ORF71298 - 0.19 11.3 0.1 0.32 10.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2737) SPICE PF15678.5 ORF70934 - 0.021 14.2 0.5 0.023 14.0 0.5 1.0 1 0 0 1 1 1 0 Centriole duplication and mitotic chromosome congression KCNQC3-Ank-G_bd PF11956.8 ORF70361 - 0.074 13.3 0.0 0.088 13.1 0.0 1.2 1 0 0 1 1 1 0 Ankyrin-G binding motif of KCNQ2-3 DUF4156 PF13698.6 ORF70267 - 0.13 12.6 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) MpPF1 PF07668.11 ORF69713 - 0.1 11.9 0.2 0.11 11.8 0.2 1.0 1 0 0 1 1 1 0 M penetrans paralogue family 1 ECF-ribofla_trS PF07155.12 ORF69620 - 0.031 14.3 0.1 0.033 14.2 0.1 1.1 1 0 0 1 1 1 0 ECF-type riboflavin transporter, S component YGGT PF02325.17 ORF69607 - 0.15 12.5 3.1 0.17 12.3 3.1 1.2 1 0 0 1 1 1 0 YGGT family Arf PF00025.21 ORF69502 - 3.4e-22 78.7 0.0 3.7e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family UPF0016 PF01169.19 ORF69289 - 3.6e-14 52.9 5.5 4e-14 52.7 5.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0016 DUF2530 PF10745.9 ORF69289 - 0.24 11.6 2.8 0.31 11.3 2.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) DUF3524 PF12038.8 ORF68800 - 0.17 11.7 0.1 0.19 11.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) AsmA_2 PF13502.6 ORF68406 - 3.8e-12 46.2 0.4 4.2e-12 46.1 0.4 1.0 1 0 0 1 1 1 1 AsmA-like C-terminal region Vault PF01505.18 ORF68325 - 0.11 12.7 0.1 0.16 12.2 0.1 1.3 1 0 0 1 1 1 0 Major Vault Protein repeat domain TauE PF01925.19 ORF68310 - 4e-05 23.4 0.4 4e-05 23.4 0.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF2568 PF10823.8 ORF68310 - 0.018 15.3 0.6 0.034 14.4 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2568) Zip PF02535.22 ORF67824 - 2 7.5 7.5 2.3 7.3 7.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter UBX PF00789.20 ORF67416 - 0.007 16.5 0.0 0.0074 16.5 0.0 1.1 1 0 0 1 1 1 1 UBX domain DUF4187 PF13821.6 ORF67268 - 0.07 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) CDC14 PF08045.11 ORF67076 - 0.033 13.3 0.1 0.034 13.3 0.1 1.0 1 0 0 1 1 1 0 Cell division control protein 14, SIN component Pox_A31 PF05771.11 ORF67076 - 0.065 13.2 0.2 0.074 13.1 0.2 1.2 1 0 0 1 1 1 0 Poxvirus A31 protein IDEAL PF08858.10 ORF67049 - 0.033 13.9 0.8 0.033 13.9 0.8 2.4 2 2 0 2 2 2 0 IDEAL domain GrpE PF01025.19 ORF67049 - 0.05 13.3 1.3 0.049 13.3 1.3 1.0 1 0 0 1 1 1 0 GrpE FAM165 PF14981.6 ORF66980 - 0.096 12.5 0.6 0.41 10.5 0.6 1.9 1 1 0 1 1 1 0 FAM165 family YlqD PF11068.8 ORF66958 - 0.0019 18.6 1.3 0.0019 18.6 1.3 1.0 1 0 0 1 1 1 1 YlqD protein DUF5082 PF16888.5 ORF66958 - 0.004 17.4 4.7 0.0063 16.8 4.7 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF5082) GrpE PF01025.19 ORF66958 - 0.0046 16.6 2.6 0.0048 16.6 2.6 1.2 1 0 0 1 1 1 1 GrpE BshC PF10079.9 ORF66958 - 0.014 14.2 1.3 0.015 14.1 1.3 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC Jnk-SapK_ap_N PF09744.9 ORF66958 - 0.016 15.4 2.2 0.017 15.3 2.2 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 ZapB PF06005.12 ORF66958 - 0.024 15.1 1.8 0.033 14.6 1.8 1.2 1 0 0 1 1 1 0 Cell division protein ZapB PTPS PF01242.19 ORF66958 - 0.031 14.2 0.1 0.036 14.0 0.1 1.1 1 0 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase BLOC1_2 PF10046.9 ORF66958 - 0.044 14.1 4.2 0.076 13.3 4.1 1.3 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Tup_N PF08581.10 ORF66958 - 0.11 12.8 5.3 1.4 9.3 5.3 2.2 1 1 0 1 1 1 0 Tup N-terminal LMP PF04778.12 ORF66958 - 0.13 12.2 8.2 0.06 13.3 4.8 1.8 1 1 1 2 2 2 0 LMP repeated region Kelch_4 PF13418.6 ORF66908 - 1.4e-06 28.2 0.1 1.6e-06 28.0 0.1 1.1 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF66908 - 0.06 13.7 0.1 0.12 12.7 0.0 1.6 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF66908 - 0.08 13.3 0.1 0.12 12.8 0.1 1.4 1 1 0 1 1 1 0 Kelch motif Kelch_5 PF13854.6 ORF66908 - 0.096 12.7 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Kelch motif eIF-1a PF01176.19 ORF66735 - 8e-28 96.0 0.0 8.9e-28 95.9 0.0 1.0 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RsgA_N PF16745.5 ORF66735 - 3e-05 23.7 0.0 3.7e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 RsgA N-terminal domain RNase_II_C_S1 PF18614.1 ORF66735 - 0.016 15.1 0.0 0.035 14.1 0.0 1.8 1 1 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain S1 PF00575.23 ORF66735 - 0.027 14.8 0.1 0.033 14.5 0.1 1.2 1 0 0 1 1 1 0 S1 RNA binding domain Myosin_N PF02736.19 ORF66735 - 0.053 13.4 0.0 5.2 7.0 0.0 2.3 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain CSD2 PF17876.1 ORF66735 - 0.1 12.8 0.1 5 7.4 0.0 2.6 1 1 2 3 3 3 0 Cold shock domain ADSL_C PF10397.9 ORF66674 - 0.017 15.7 0.2 0.021 15.4 0.2 1.2 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminus Vps55 PF04133.14 ORF66470 - 0.051 13.5 0.2 0.07 13.1 0.2 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting 55 Cullin PF00888.22 ORF6622 - 0.0082 14.8 0.2 0.0085 14.8 0.2 1.1 1 0 0 1 1 1 1 Cullin family DUF5090 PF17009.5 ORF65566 - 5.2 7.0 12.9 5.8 6.8 12.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF1933 PF09147.10 ORF65489 - 0.036 13.7 0.0 0.04 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1933) ERbeta_N PF12497.8 ORF65284 - 0.086 12.6 0.7 3.6 7.4 0.1 2.2 1 1 1 2 2 2 0 Estrogen receptor beta DUF3006 PF11213.8 ORF64609 - 0.052 13.8 2.4 0.064 13.5 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3006) StbA PF06406.11 ORF64609 - 0.19 10.9 4.0 0.19 10.9 4.0 1.0 1 0 0 1 1 1 0 StbA protein Mntp PF02659.15 ORF64254 - 0.012 15.4 0.6 0.012 15.4 0.6 1.2 1 0 0 1 1 1 0 Putative manganese efflux pump FYVE_2 PF02318.16 ORF63703 - 0.02 15.1 1.7 0.021 15.0 1.7 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger DUF3035 PF11233.8 ORF63616 - 0.045 14.0 0.3 0.051 13.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) AAA_5 PF07728.14 ORF63568 - 0.15 12.1 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) adh_short_C2 PF13561.6 ORF63041 - 2e-08 34.1 0.0 2.2e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase INCENP_N PF12178.8 ORF62793 - 0.77 9.8 3.2 2.3 8.3 0.9 2.3 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal HdeA PF06411.11 ORF62789 - 0.086 13.0 1.4 0.095 12.9 1.0 1.3 1 1 0 1 1 1 0 HdeA/HdeB family PH_4 PF15404.6 ORF62789 - 0.29 10.9 7.6 0.31 10.8 7.6 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain MMM1 PF10296.9 ORF62789 - 2.7 7.0 8.0 2.9 6.9 8.0 1.0 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Zip PF02535.22 ORF62789 - 2.9 7.0 4.9 3.1 6.9 4.9 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Coilin_N PF15862.5 ORF62789 - 4.9 7.0 17.7 5.9 6.7 17.7 1.2 1 0 0 1 1 1 0 Coilin N-terminus Connexin PF00029.19 ORF62789 - 8.2 6.1 9.5 8.1 6.1 9.5 1.0 1 0 0 1 1 1 0 Connexin Glyco_hydro_65C PF03633.15 ORF62784 - 0.099 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain Diphthamide_syn PF01866.17 ORF62389 - 0.11 11.9 1.1 0.12 11.8 1.1 1.1 1 0 0 1 1 1 0 Putative diphthamide synthesis protein PAD_M PF08527.10 ORF62389 - 0.26 11.0 2.0 0.26 10.9 2.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain FAD_binding_4 PF01565.23 ORF62240 - 0.14 11.9 0.1 0.18 11.6 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain AKNA PF12443.8 ORF61811 - 0.0057 17.3 0.0 0.0074 16.9 0.0 1.1 1 0 0 1 1 1 1 AT-hook-containing transcription factor Phage_portal PF04860.12 ORF61811 - 0.022 14.0 0.1 0.023 13.9 0.1 1.0 1 0 0 1 1 1 0 Phage portal protein Rhodanese PF00581.20 ORF61768 - 9.3e-06 26.1 0.0 1.4e-05 25.6 0.0 1.2 1 0 0 1 1 1 1 Rhodanese-like domain DUF2981 PF11200.8 ORF61608 - 0.26 11.0 1.4 0.26 11.0 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) G-7-MTase PF12803.7 ORF61577 - 0.21 10.8 0.0 0.21 10.8 0.0 1.0 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) DUF3524 PF12038.8 ORF61284 - 0.17 11.7 0.1 0.19 11.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) Lipoprotein_3 PF00938.17 ORF60977 - 0.018 15.2 0.1 0.024 14.8 0.1 1.3 1 1 0 1 1 1 0 Lipoprotein Trep_Strep PF09605.10 ORF60977 - 0.065 13.2 0.1 0.074 13.0 0.1 1.1 1 0 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) DUF4490 PF14892.6 ORF59818 - 3.6e-13 49.4 1.8 3.8e-13 49.4 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) MbtH PF03621.13 ORF59698 - 5.2e-21 73.8 0.8 6.4e-21 73.6 0.8 1.1 1 0 0 1 1 1 1 MbtH-like protein TRAPPC10 PF12584.8 ORF59688 - 0.00054 19.7 0.0 0.00056 19.7 0.0 1.0 1 0 0 1 1 1 1 Trafficking protein particle complex subunit 10, TRAPPC10 Gryzun-like PF12742.7 ORF59688 - 0.032 14.2 0.0 0.041 13.9 0.0 1.2 1 0 0 1 1 1 0 Gryzun, putative Golgi trafficking ChitinaseA_N PF08329.10 ORF59247 - 0.07 12.8 0.0 0.075 12.7 0.0 1.1 1 0 0 1 1 1 0 Chitinase A, N-terminal domain MRF_C2 PF13888.6 ORF59247 - 0.096 12.6 0.7 0.11 12.4 0.7 1.1 1 0 0 1 1 1 0 Myelin gene regulatory factor C-terminal domain 2 AAA PF00004.29 ORF59094 - 5.5e-18 65.7 0.0 5.7e-18 65.6 0.0 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF4901 PF16244.5 ORF58501 - 0.059 12.7 0.1 0.093 12.1 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4901) DUF2947 PF11163.8 ORF58411 - 0.079 12.8 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2947) DUF2981 PF11200.8 ORF5799 - 0.26 11.0 1.4 0.26 11.0 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) zf-AN1 PF01428.16 ORF57946 - 0.14 12.3 7.9 0.33 11.2 7.9 1.7 1 1 0 1 1 1 0 AN1-like Zinc finger Diphthamide_syn PF01866.17 ORF57299 - 0.11 11.9 1.1 0.12 11.8 1.1 1.1 1 0 0 1 1 1 0 Putative diphthamide synthesis protein PAD_M PF08527.10 ORF57299 - 0.26 11.0 2.0 0.26 10.9 2.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain AsmA_2 PF13502.6 ORF56592 - 3.8e-12 46.2 0.4 4.2e-12 46.1 0.4 1.0 1 0 0 1 1 1 1 AsmA-like C-terminal region FadR_C PF07840.12 ORF56437 - 1.3e-23 83.7 0.0 1.4e-23 83.6 0.0 1.0 1 0 0 1 1 1 1 FadR C-terminal domain MFS_1 PF07690.16 ORF55939 - 0.0044 16.0 1.5 0.0045 15.9 1.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Ycf66_N PF07444.11 ORF55939 - 0.055 13.6 0.3 0.12 12.5 0.1 1.6 1 1 1 2 2 2 0 Ycf66 protein N-terminus UPA PF17217.3 ORF55670 - 0.12 12.2 0.2 0.14 12.0 0.2 1.1 1 0 0 1 1 1 0 UPA domain DUF1601 PF07671.11 ORF55546 - 0.11 12.4 2.6 1.2 9.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1601) IL17R_fnIII_D1 PF16556.5 ORF55194 - 0.058 13.0 0.3 0.08 12.6 0.1 1.4 2 0 0 2 2 2 0 Interleukin-17 receptor, fibronectin-III-like domain 1 Prion_bPrPp PF11587.8 ORF54879 - 0.014 15.2 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 Major prion protein bPrPp - N terminal XRN_M PF17846.1 ORF54374 - 1.6e-05 24.1 0.5 1.6e-05 24.0 0.5 1.0 1 0 0 1 1 1 1 Xrn1 helical domain SdpA PF17418.2 ORF53327 - 0.042 13.7 0.0 0.05 13.5 0.0 1.1 1 0 0 1 1 1 0 Sporulation delaying protein SdpA PnpCD_PnpD_N PF18191.1 ORF53133 - 0.12 11.9 0.2 0.12 11.9 0.2 1.1 1 0 0 1 1 1 0 Hydroquinone 1,2-dioxygenase large subunit N-terminal NfI_DNAbd_pre-N PF10524.9 ORF52873 - 0.0043 16.9 0.5 0.0094 15.8 0.5 1.5 1 0 0 1 1 1 1 Nuclear factor I protein pre-N-terminus NUDE_C PF04880.13 ORF52746 - 0.007 16.9 0.8 0.0073 16.8 0.8 1.0 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region Caps_synth_CapC PF14102.6 ORF52690 - 0.053 13.9 0.1 0.059 13.8 0.1 1.2 1 1 0 1 1 1 0 Capsule biosynthesis CapC DUF1732 PF08340.11 ORF52687 - 0.15 12.0 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1732) CvfB_WH PF17783.1 ORF5268 - 0.15 11.9 0.1 0.39 10.6 0.1 1.8 1 1 0 1 1 1 0 CvfB-like winged helix domain ERbeta_N PF12497.8 ORF52597 - 0.086 12.6 0.7 3.6 7.4 0.1 2.2 1 1 1 2 2 2 0 Estrogen receptor beta T6_Ig_like PF18002.1 ORF52362 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 T6 antigen Ig like domain Paf1 PF03985.13 ORF51972 - 0.02 13.9 0.1 0.023 13.7 0.1 1.0 1 0 0 1 1 1 0 Paf1 MmoB_DmpM PF02406.17 ORF51910 - 0.069 13.4 0.9 0.088 13.0 0.9 1.3 1 1 0 1 1 1 0 MmoB/DmpM family ORF45 PF17620.2 ORF51847 - 0.045 13.9 0.3 0.051 13.7 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function Castor_Poll_mid PF06241.12 ORF51725 - 0.038 14.0 0.1 0.043 13.8 0.1 1.1 1 0 0 1 1 1 0 Castor and Pollux, part of voltage-gated ion channel DUF4490 PF14892.6 ORF51261 - 3.6e-13 49.4 1.8 3.8e-13 49.4 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) UPF1_Zn_bind PF09416.10 ORF5087 - 4.2e-21 75.5 3.2 4.4e-21 75.5 3.2 1.0 1 0 0 1 1 1 1 RNA helicase (UPF2 interacting domain) P66_CC PF16563.5 ORF49667 - 0.11 12.2 1.2 0.11 12.2 1.2 1.9 2 0 0 2 2 2 0 Coiled-coil and interaction region of P66A and P66B with MBD2 PPR_2 PF13041.6 ORF49606 - 0.0089 16.2 0.0 0.013 15.6 0.0 1.3 1 0 0 1 1 1 1 PPR repeat family PPR PF01535.20 ORF49606 - 0.055 13.7 0.0 8.8 6.8 0.0 2.4 2 0 0 2 2 2 0 PPR repeat KAR PF15222.6 ORF49606 - 0.085 13.2 0.0 0.087 13.1 0.0 1.1 1 0 0 1 1 1 0 Kidney androgen-regulated DUF5558 PF17713.1 ORF4948 - 0.025 15.0 0.4 0.028 14.8 0.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5558) DUF3687 PF12459.8 ORF48983 - 0.0048 16.4 0.1 0.0048 16.4 0.1 1.7 2 0 0 2 2 2 1 D-Ala-teichoic acid biosynthesis protein DUF4529 PF15032.6 ORF48975 - 0.085 12.0 0.1 0.089 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) EAR PF07897.11 ORF489 - 5.8 6.6 8.8 0.37 10.5 0.4 2.5 2 1 0 2 2 2 0 Ethylene-responsive binding factor-associated repression DUF4734 PF15881.5 ORF48875 - 2 8.7 5.0 13 6.1 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4734) CbtB PF09489.10 ORF4860 - 0.0087 16.1 0.2 0.012 15.7 0.2 1.2 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtB) Lipase3_N PF03893.16 ORF48285 - 0.02 14.9 0.3 0.025 14.6 0.3 1.2 1 0 0 1 1 1 0 Lipase 3 N-terminal region ERbeta_N PF12497.8 ORF47561 - 0.086 12.6 0.7 3.6 7.4 0.1 2.2 1 1 1 2 2 2 0 Estrogen receptor beta Xol-1_GHMP-like PF09109.10 ORF47447 - 0.47 10.3 3.5 3.1 7.7 3.5 1.9 1 1 0 1 1 1 0 Switch protein XOL-1, GHMP-like EVC2_like PF12297.8 ORF47218 - 0.087 11.5 0.5 0.092 11.4 0.5 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein EAR PF07897.11 ORF46570 - 5.8 6.6 8.8 0.37 10.5 0.4 2.5 2 1 0 2 2 2 0 Ethylene-responsive binding factor-associated repression TPK_catalytic PF04263.16 ORF46288 - 0.12 12.4 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain DUF515 PF04415.12 ORF45946 - 4.9 5.4 6.9 5.3 5.3 6.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Ish1 PF10281.9 ORF45906 - 0.14 12.5 1.9 0.27 11.6 1.9 1.5 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein p53-inducible11 PF14936.6 ORF4579 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Tumour protein p53-inducible protein 11 Endosulfine PF04667.17 ORF44985 - 0.002 18.2 1.9 0.0024 18.0 1.9 1.2 1 0 0 1 1 1 1 cAMP-regulated phosphoprotein/endosulfine conserved region DUF5365 PF17326.2 ORF4482 - 0.062 13.7 0.3 0.072 13.5 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5365) DUF4035 PF13227.6 ORF44590 - 0.095 12.4 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4035) FLYWCH_u PF16662.5 ORF4431 - 0.073 13.1 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 FLYWCH-type zinc finger-containing protein 1 zf-LITAF-like PF10601.9 ORF43638 - 0.017 15.4 1.1 0.022 15.0 1.1 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Spt46 PF17734.1 ORF43603 - 0.14 11.9 0.2 0.17 11.6 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 CBFB_NFYA PF02045.15 ORF42907 - 0.019 15.5 4.0 0.025 15.2 4.0 1.2 1 0 0 1 1 1 0 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B DUF5326 PF17260.2 ORF4279 - 0.0057 16.8 1.2 0.0083 16.2 1.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5326) ELH PF02323.15 ORF4279 - 1.1 8.6 2.2 1.4 8.3 2.2 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor WWE PF02825.20 ORF42129 - 1.3e-12 48.1 0.1 1.6e-12 47.8 0.1 1.1 1 0 0 1 1 1 1 WWE domain Radial_spoke PF04712.12 ORF42093 - 0.00021 20.4 0.1 0.00024 20.2 0.1 1.0 1 0 0 1 1 1 1 Radial spokehead-like protein EF_assoc_1 PF08355.12 ORF41506 - 0.16 11.6 5.4 0.23 11.1 5.4 1.2 1 0 0 1 1 1 0 EF hand associated DUF1104 PF06518.11 ORF41506 - 5 7.6 15.4 1.5 9.3 12.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1104) Carla_C4 PF01623.17 ORF41491 - 0.055 13.4 7.4 0.42 10.6 5.5 2.0 1 1 1 2 2 2 0 Carlavirus putative nucleic acid binding protein MFS_1 PF07690.16 ORF40685 - 0.0014 17.7 0.8 0.0052 15.8 0.0 1.8 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF40685 - 0.017 14.0 0.0 0.017 14.0 0.0 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter MFS_4 PF06779.14 ORF40685 - 0.08 12.2 0.1 0.091 12.0 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB NPR1_interact PF15699.5 ORF40342 - 0.16 12.6 0.0 0.19 12.4 0.0 1.1 1 0 0 1 1 1 0 NPR1 interacting Metallophos PF00149.28 ORF40135 - 2.5e-06 28.2 0.0 2.6e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF309 PF03745.14 ORF39981 - 0.066 12.9 0.4 0.093 12.4 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF309) HTH_DeoR PF08220.12 ORF39380 - 0.094 12.5 0.5 4.6 7.1 0.0 2.3 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain E3_UbLigase_RBR PF18091.1 ORF39007 - 0.066 13.3 0.1 0.076 13.1 0.1 1.2 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain RIIa PF02197.17 ORF38932 - 1.4e-07 31.0 0.0 2e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit WWE PF02825.20 ORF38893 - 1.3e-12 48.1 0.1 1.6e-12 47.8 0.1 1.1 1 0 0 1 1 1 1 WWE domain DUF1589 PF07628.11 ORF38544 - 0.00047 20.3 2.2 0.00055 20.1 2.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1589) Birna_VP3 PF01767.16 ORF38544 - 0.013 15.6 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Birnavirus VP3 protein DUF5526 PF17664.1 ORF38262 - 0.054 13.1 0.1 0.059 12.9 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5526) MORN PF02493.20 ORF38236 - 1.7e-16 59.0 21.7 6.7e-07 28.8 0.9 4.0 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 ORF38236 - 1.3 8.7 9.0 12 5.6 0.0 3.2 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain VitD-bind_III PF09164.10 ORF37960 - 0.066 13.2 0.9 0.092 12.7 0.9 1.2 1 0 0 1 1 1 0 Vitamin D binding protein, domain III Diphthamide_syn PF01866.17 ORF37868 - 0.11 11.9 1.1 0.12 11.8 1.1 1.1 1 0 0 1 1 1 0 Putative diphthamide synthesis protein PAD_M PF08527.10 ORF37868 - 0.26 11.0 2.0 0.26 10.9 2.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain vMSA PF00695.19 ORF37496 - 0.33 10.0 10.3 0.34 9.9 10.3 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus FUSC_2 PF13515.6 ORF37496 - 1.1 9.4 6.4 1.9 8.6 3.2 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein-like Fijivirus_P9-2 PF06837.11 ORF37496 - 5.2 6.5 11.5 5.8 6.3 11.5 1.3 1 1 0 1 1 1 0 Fijivirus P9-2 protein DUF4727 PF15856.5 ORF37275 - 0.06 12.9 0.0 0.066 12.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4727) DUF3270 PF11674.8 ORF37227 - 0.098 12.8 1.7 0.11 12.7 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) Hema_HEFG PF02710.14 ORF37221 - 0.052 13.8 0.1 0.061 13.5 0.1 1.0 1 0 0 1 1 1 0 Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein PPR_2 PF13041.6 ORF37195 - 2.6e-10 40.3 0.0 1.1e-07 32.0 0.0 1.6 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF37195 - 9.5e-06 25.6 0.0 0.0022 18.1 0.0 1.7 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF37195 - 0.013 15.7 0.0 0.021 15.0 0.0 1.4 1 0 0 1 1 1 0 PPR repeat Prok-RING_4 PF14447.6 ORF36897 - 0.063 13.1 2.3 0.098 12.5 2.3 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 ApbA_C PF08546.11 ORF36844 - 5.6e-18 65.3 0.0 6.2e-18 65.2 0.0 1.0 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal DUF1827 PF08860.10 ORF36844 - 0.04 14.2 0.0 0.057 13.7 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1827) EpCAM_N PF18635.1 ORF36784 - 0.12 12.6 0.2 0.19 11.9 0.2 1.3 1 0 0 1 1 1 0 Epithelial cell adhesion molecule N-terminal domain Lipase3_N PF03893.16 ORF36702 - 0.02 14.9 0.3 0.025 14.6 0.3 1.2 1 0 0 1 1 1 0 Lipase 3 N-terminal region GDNF PF02351.16 ORF36295 - 0.11 13.5 0.9 0.18 12.8 0.9 1.4 1 0 0 1 1 1 0 GDNF/GAS1 domain DUF4738 PF15889.5 ORF35890 - 0.04 13.8 0.0 0.047 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4738) Lipase3_N PF03893.16 ORF35807 - 0.02 14.9 0.3 0.025 14.6 0.3 1.2 1 0 0 1 1 1 0 Lipase 3 N-terminal region QSregVF_b PF12843.7 ORF35796 - 2.9e-29 100.7 0.3 3.2e-29 100.6 0.3 1.0 1 0 0 1 1 1 1 Putative quorum-sensing-regulated virulence factor EspB_PE PF18625.1 ORF34327 - 0.02 15.4 1.5 0.028 14.9 1.5 1.2 1 0 0 1 1 1 0 ESX-1 secreted protein B PE domain zf-MYND PF01753.18 ORF34308 - 0.34 11.0 3.4 0.5 10.5 3.4 1.2 1 0 0 1 1 1 0 MYND finger DUF3862 PF12978.7 ORF34008 - 0.023 14.5 0.2 0.026 14.3 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3862) FtsH_ext PF06480.15 ORF34008 - 0.036 14.4 0.3 0.037 14.4 0.3 1.1 1 0 0 1 1 1 0 FtsH Extracellular GreA_GreB_N PF03449.15 ORF34008 - 0.038 14.1 0.0 0.058 13.5 0.0 1.3 1 0 0 1 1 1 0 Transcription elongation factor, N-terminal PRD PF00874.20 ORF34008 - 0.067 13.5 0.1 0.08 13.2 0.1 1.1 1 0 0 1 1 1 0 PRD domain TraG-D_C PF12696.7 ORF32882 - 0.29 11.1 3.0 0.32 11.0 3.0 1.1 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG NYAP_N PF15439.6 ORF3181 - 0.13 11.4 0.2 0.15 11.2 0.2 1.0 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter DUF21 PF01595.20 ORF31649 - 0.079 12.7 0.8 0.085 12.6 0.8 1.1 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain ATP-grasp_4 PF13535.6 ORF31427 - 0.07 12.7 0.1 0.081 12.5 0.1 1.1 1 0 0 1 1 1 0 ATP-grasp domain TB2_DP1_HVA22 PF03134.19 ORF31403 - 1.2 9.2 8.2 1.9 8.5 8.2 1.6 1 1 0 1 1 1 0 TB2/DP1, HVA22 family CcmH PF03918.14 ORF31274 - 0.21 10.9 0.5 0.24 10.7 0.5 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein Flu_M2 PF00599.17 ORF30608 - 0.16 12.1 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 Influenza Matrix protein (M2) Coatomer_b_Cpla PF14806.6 ORF3047 - 2.9e-23 82.3 0.0 3.2e-23 82.1 0.0 1.0 1 0 0 1 1 1 1 Coatomer beta subunit appendage platform Pkinase PF00069.25 ORF30383 - 2.3e-14 53.4 0.0 2.4e-14 53.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30383 - 6.7e-08 32.1 0.0 6.9e-08 32.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase zf-C2H2 PF00096.26 ORF30225 - 1.3e-10 41.1 14.8 1.1e-05 25.7 3.7 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF30225 - 1.9e-07 31.3 12.3 0.00075 20.1 3.3 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF30225 - 1.8e-06 28.1 10.6 0.012 16.1 0.4 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-met PF12874.7 ORF30225 - 3.6e-05 24.0 8.3 0.056 13.9 3.2 2.2 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF30225 - 0.0034 17.1 5.8 0.026 14.3 0.5 2.2 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-H2C2_5 PF13909.6 ORF30225 - 0.0038 16.9 3.8 0.0038 16.9 3.8 3.0 3 0 0 3 3 3 1 C2H2-type zinc-finger domain C1_1 PF00130.22 ORF30225 - 0.0079 16.1 1.4 0.016 15.1 1.4 1.6 1 1 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2H2_jaz PF12171.8 ORF30225 - 0.034 14.4 10.4 1.6 9.1 0.2 2.4 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-BED PF02892.15 ORF30225 - 0.037 14.0 10.3 0.29 11.2 2.3 2.4 1 1 1 2 2 2 0 BED zinc finger Zn-ribbon_8 PF09723.10 ORF30225 - 0.11 12.7 3.0 2.2 8.5 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF30225 - 0.3 11.1 7.7 1.2 9.2 7.7 1.9 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zf-C2HE PF16278.5 ORF30225 - 0.41 11.1 5.9 0.17 12.3 2.6 1.9 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Evr1_Alr PF04777.13 ORF30225 - 0.45 11.0 3.3 9.9 6.7 0.3 2.1 1 1 1 2 2 2 0 Erv1 / Alr family C1_4 PF07975.12 ORF30225 - 0.49 10.7 6.5 1.2 9.4 1.5 2.1 1 1 1 2 2 2 0 TFIIH C1-like domain zf-C2H2_6 PF13912.6 ORF30225 - 0.66 10.0 5.7 3.7 7.7 1.9 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger DUF629 PF04780.12 ORF30225 - 2.7 6.4 5.9 8.9 4.7 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF629) MORN PF02493.20 ORF29790 - 3.1e-16 58.2 14.5 3.8e-07 29.6 1.6 3.7 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 ORF29790 - 0.012 15.3 0.3 4.7 7.0 0.1 2.2 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain Cas_DxTHG PF09455.10 ORF29738 - 0.12 12.0 0.2 0.13 11.8 0.2 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family zf-GRF PF06839.12 ORF29093 - 2.7e-12 46.6 2.3 4.9e-10 39.3 0.3 2.1 2 0 0 2 2 2 2 GRF zinc finger TBX PF12598.8 ORF28904 - 0.011 16.5 0.6 0.016 16.0 0.6 1.2 1 0 0 1 1 1 0 T-box transcription factor LRR_12 PF18837.1 ORF28319 - 4.7 7.0 6.6 8.9 6.1 0.4 2.9 3 0 0 3 3 3 0 Leucine-rich repeat PnpCD_PnpD_N PF18191.1 ORF27976 - 0.12 11.9 0.2 0.12 11.9 0.2 1.1 1 0 0 1 1 1 0 Hydroquinone 1,2-dioxygenase large subunit N-terminal Sec15 PF04091.12 ORF2752 - 0.12 11.8 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 Exocyst complex subunit Sec15-like Ribosom_S12_S23 PF00164.25 ORF27387 - 0.029 14.0 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S12/S23 RCC1_2 PF13540.6 ORF27306 - 7.1e-07 28.9 0.3 1.2e-06 28.2 0.3 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Wtap PF17098.5 ORF26757 - 0.016 15.1 1.2 0.021 14.8 1.2 1.3 1 1 0 1 1 1 0 WTAP/Mum2p family Spt46 PF17734.1 ORF26472 - 0.14 11.9 0.2 0.17 11.6 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 PH_11 PF15413.6 ORF2642 - 0.021 15.2 0.2 0.021 15.2 0.2 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain PH_11 PF15413.6 ORF26419 - 0.021 15.2 0.2 0.021 15.2 0.2 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain XhlA PF10779.9 ORF26026 - 0.11 12.7 0.3 0.16 12.2 0.3 1.3 1 0 0 1 1 1 0 Haemolysin XhlA UBM PF14377.6 ORF25969 - 0.0013 18.1 0.0 0.047 13.2 0.0 2.4 2 0 0 2 2 2 1 Ubiquitin binding region Arnt_C PF18583.1 ORF25969 - 0.056 13.1 0.0 0.061 12.9 0.0 1.3 1 0 0 1 1 1 0 Aminoarabinose transferase C-terminal domain Rtt106_N PF18215.1 ORF25969 - 0.13 12.0 0.5 1.9 8.3 0.1 2.5 2 1 1 3 3 3 0 Histone chaperone Rtt106 N-terminal domain IGF2_C PF08365.11 ORF25898 - 0.13 12.3 1.9 0.21 11.6 1.9 1.4 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide MORN PF02493.20 ORF25748 - 4.3e-13 48.3 17.2 9.2e-07 28.4 1.5 3.2 3 0 0 3 3 3 3 MORN repeat DNA_pol_alpha_N PF12254.8 ORF25630 - 0.036 14.1 0.0 0.049 13.7 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal EF-hand_6 PF13405.6 ORF25590 - 2.3e-06 27.1 0.6 4e-06 26.3 0.2 1.6 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF25590 - 4.6e-06 25.8 0.2 8.1e-06 25.0 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF25590 - 1.1e-05 25.8 0.5 2.2e-05 24.8 0.2 1.6 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF25590 - 0.003 17.0 0.5 0.0053 16.2 0.5 1.4 1 0 0 1 1 1 1 EF hand SBDS PF01172.18 ORF25590 - 0.049 13.7 0.1 0.055 13.5 0.1 1.1 1 0 0 1 1 1 0 Shwachman-Bodian-Diamond syndrome (SBDS) protein Prok-E2_E PF14462.6 ORF24934 - 1.7 8.5 7.0 0.66 9.8 5.1 1.4 1 1 0 1 1 1 0 Prokaryotic E2 family E gag_pre-integrs PF13976.6 ORF24866 - 0.091 12.6 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 GAG-pre-integrase domain Saf_2TM PF18303.1 ORF24759 - 0.065 12.8 0.2 0.088 12.4 0.2 1.3 1 1 0 1 1 1 0 SAVED-fused 2TM effector domain ACTL7A_N PF16840.5 ORF24395 - 0.077 13.1 0.8 0.099 12.7 0.8 1.3 1 0 0 1 1 1 0 Actin-like protein 7A N-terminus Plasmid_parti PF01672.16 ORF24025 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein MORN PF02493.20 ORF23167 - 1e-12 47.2 14.8 8.7e-08 31.6 1.6 2.8 3 0 0 3 3 3 2 MORN repeat TcpA PF05946.12 ORF2303 - 0.088 12.9 0.0 0.098 12.8 0.0 1.0 1 0 0 1 1 1 0 Toxin-coregulated pilus subunit TcpA DUF3487 PF11990.8 ORF22595 - 0.38 10.7 2.2 0.43 10.5 1.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3487) PrmA PF06325.13 ORF2237 - 2.8e-19 69.6 0.0 3e-19 69.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Castor_Poll_mid PF06241.12 ORF22011 - 0.038 14.0 0.1 0.043 13.8 0.1 1.1 1 0 0 1 1 1 0 Castor and Pollux, part of voltage-gated ion channel Herpes_UL16 PF03044.14 ORF21864 - 0.088 12.1 0.0 0.088 12.1 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family VPS13 PF16908.5 ORF21084 - 2.6e-07 30.7 0.1 2.8e-07 30.6 0.1 1.0 1 0 0 1 1 1 1 Vacuolar sorting-associated protein 13, N-terminal Lipoprotein_Ltp PF07553.11 ORF21084 - 0.025 14.8 0.3 0.043 14.1 0.3 1.4 1 0 0 1 1 1 0 Host cell surface-exposed lipoprotein AIM24 PF01987.17 ORF20805 - 0.055 13.2 0.0 0.058 13.2 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial biogenesis AIM24 MFS18 PF17352.2 ORF20502 - 0.18 12.2 3.9 0.23 11.9 3.9 1.2 1 0 0 1 1 1 0 Male Flower Specific protein 18 DUF2600 PF10776.9 ORF20294 - 0.0048 15.8 0.4 0.0051 15.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2600) EF-hand_1 PF00036.32 ORF20183 - 8.2e-15 53.2 3.2 1e-06 27.8 0.3 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF20183 - 1.8e-13 50.8 1.6 2e-13 50.5 1.6 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF20183 - 7.3e-13 47.3 0.9 3e-06 26.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF20183 - 7.7e-09 35.3 3.4 0.00015 21.6 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF20183 - 2.3e-08 33.1 1.5 0.00011 21.5 0.2 2.4 2 0 0 2 2 2 2 EF hand Dockerin_1 PF00404.18 ORF20183 - 2.9e-06 27.4 0.8 0.0007 19.7 0.3 1.7 1 1 1 2 2 2 2 Dockerin type I domain EF-hand_9 PF14658.6 ORF20183 - 0.00016 21.9 0.1 0.0002 21.6 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain DUF2666 PF10869.8 ORF20183 - 0.055 13.7 0.0 0.066 13.4 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2666) EF-hand_4 PF12763.7 ORF20183 - 0.083 12.8 0.9 0.5 10.4 0.9 1.9 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand TMF_DNA_bd PF12329.8 ORF19808 - 0.022 14.8 0.7 0.027 14.5 0.7 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding UPF0242 PF06785.11 ORF19808 - 0.029 14.5 1.2 0.028 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Flagellin_C PF00700.21 ORF1976 - 0.012 16.0 0.2 0.014 15.7 0.2 1.2 1 0 0 1 1 1 0 Bacterial flagellin C-terminal helical region Plasmid_parti PF01672.16 ORF19217 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks342.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks342.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks342.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks342.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:31 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1658 PF07871.11 ORF16543 - 0.095 12.7 0.7 0.095 12.7 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) DUF2163 PF09931.9 ORF16190 - 0.054 13.7 0.1 0.059 13.6 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2163) DUF842 PF05811.13 ORF16161 - 0.0087 15.8 0.2 0.0099 15.6 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF842) Dus PF01207.17 ORF16150 - 0.038 13.1 0.0 0.042 12.9 0.0 1.0 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) CvfB_WH PF17783.1 ORF16031 - 0.15 11.9 0.1 0.39 10.6 0.1 1.8 1 1 0 1 1 1 0 CvfB-like winged helix domain MORN PF02493.20 ORF15404 - 2.1e-18 65.0 20.2 4.5e-09 35.7 3.1 4.0 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF15404 - 0.024 14.3 6.4 1.1 8.9 0.0 3.0 3 1 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain MORN_2 PF07661.13 ORF15404 - 0.8 10.1 5.7 0.98 9.9 1.4 3.1 3 1 0 3 3 3 0 MORN repeat variant DUF4777 PF16007.5 ORF15241 - 0.043 14.1 0.0 0.064 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) Zn-ribbon_8 PF09723.10 ORF14386 - 0.27 11.4 11.3 0.69 10.1 3.0 2.3 2 0 0 2 2 2 0 Zinc ribbon domain ADK_lid PF05191.14 ORF14386 - 0.76 9.8 11.5 0.94 9.5 2.0 2.3 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-H2C2_2 PF13465.6 ORF14386 - 1.2 9.7 12.9 1.3 9.6 0.4 3.0 3 0 0 3 3 3 0 Zinc-finger double domain zinc-ribbons_6 PF07191.12 ORF14386 - 2.6 8.1 15.1 12 6.0 15.1 2.1 1 1 0 1 1 1 0 zinc-ribbons HC2 PF07382.11 ORF13789 - 0.069 13.2 3.8 0.077 13.1 3.8 1.1 1 0 0 1 1 1 0 Histone H1-like nucleoprotein HC2 YueH PF14166.6 ORF13517 - 0.14 12.0 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 YueH-like protein Nebulin PF00880.18 ORF12812 - 0.015 15.2 0.2 0.034 14.1 0.2 1.6 1 0 0 1 1 1 0 Nebulin repeat Flu_M1 PF00598.19 ORF12812 - 0.02 14.4 2.2 0.021 14.3 0.5 1.7 1 1 1 2 2 2 0 Influenza Matrix protein (M1) LAGLIDADG_3 PF14528.6 ORF12812 - 0.11 12.8 1.4 0.19 12.0 1.4 1.5 1 1 0 1 1 1 0 LAGLIDADG-like domain Ad_cyc_g-alpha PF08509.11 ORF12572 - 0.014 15.1 3.0 0.09 12.5 0.7 2.1 2 0 0 2 2 2 0 Adenylate cyclase G-alpha binding domain zf-trcl PF13451.6 ORF12304 - 0.046 13.6 1.5 15 5.6 0.0 2.9 2 1 1 3 3 3 0 Probable zinc-ribbon domain DUF2690 PF10901.8 ORF12304 - 0.28 11.5 2.9 9.4 6.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2690) TMF_DNA_bd PF12329.8 ORF11847 - 0.022 14.8 0.7 0.027 14.5 0.7 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding UPF0242 PF06785.11 ORF11847 - 0.029 14.5 1.2 0.028 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4530 PF15039.6 ORF11704 - 0.13 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4530) GTP_EFTU PF00009.27 ORF11359 - 0.00032 20.3 0.3 0.00035 20.2 0.3 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain ClpS PF02617.17 ORF11359 - 0.0092 15.7 0.1 0.011 15.5 0.1 1.2 1 0 0 1 1 1 1 ATP-dependent Clp protease adaptor protein ClpS ATP_bind_1 PF03029.17 ORF11359 - 0.086 12.6 0.1 0.091 12.5 0.1 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein DUF1726 PF08351.11 ORF11359 - 0.087 12.8 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1726) L-fibroin PF05849.11 ORF11359 - 0.11 11.7 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Fibroin light chain (L-fibroin) GCS2 PF04107.13 ORF112253 - 0.25 10.7 0.9 0.27 10.5 0.9 1.0 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) DUF3212 PF11486.8 ORF112125 - 0.068 13.2 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3212) Feld-I_B PF09252.10 ORF112125 - 0.099 12.6 0.3 3.6 7.6 0.1 2.1 1 1 1 2 2 2 0 Allergen Fel d I-B chain Arf PF00025.21 ORF112121 - 1.9e-19 69.8 0.0 2.1e-19 69.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Cupin_8 PF13621.6 ORF11197 - 0.16 11.7 0.1 0.2 11.4 0.1 1.1 1 0 0 1 1 1 0 Cupin-like domain Pkinase PF00069.25 ORF111734 - 8.1e-14 51.6 0.2 8.5e-14 51.5 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF111734 - 1.3e-08 34.5 0.1 1.3e-08 34.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase p53-inducible11 PF14936.6 ORF111558 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Tumour protein p53-inducible protein 11 MpPF1 PF07668.11 ORF111480 - 0.1 11.9 0.2 0.11 11.8 0.2 1.0 1 0 0 1 1 1 0 M penetrans paralogue family 1 Tudor_FRX1 PF18336.1 ORF111407 - 0.16 11.9 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 Fragile X mental retardation Tudor domain DNA_pol_A_exo1 PF01612.20 ORF111179 - 5.5e-07 29.5 0.3 7.2e-07 29.1 0.3 1.2 1 0 0 1 1 1 1 3'-5' exonuclease SlyX PF04102.12 ORF111179 - 0.069 13.8 0.0 0.08 13.6 0.0 1.2 1 0 0 1 1 1 0 SlyX DUF4395 PF14340.6 ORF111152 - 0.022 15.1 3.0 0.033 14.5 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4395) Ifi-6-16 PF06140.13 ORF111152 - 0.067 13.1 4.6 0.093 12.7 4.6 1.1 1 0 0 1 1 1 0 Interferon-induced 6-16 family MCLC PF05934.11 ORF111152 - 0.23 10.2 0.2 0.24 10.1 0.2 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Myticin-prepro PF10690.9 ORF111152 - 0.27 11.5 1.2 0.37 11.1 1.2 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Plasmid_parti PF01672.16 ORF111061 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein LysR_substrate PF03466.20 ORF11035 - 1.1e-06 28.1 0.0 1.4e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain betaPIX_CC PF16523.5 ORF110212 - 0.031 14.1 6.6 0.036 13.9 6.6 1.1 1 0 0 1 1 1 0 betaPIX coiled coil Peptidase_U57 PF05582.12 ORF110161 - 0.048 12.9 0.0 0.048 12.9 0.0 1.1 1 0 0 1 1 1 0 YabG peptidase U57 UPF0086 PF01868.16 ORF109863 - 0.081 12.9 0.3 0.14 12.1 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function UPF0086 Acid_PPase PF12689.7 ORF109658 - 6e-12 45.7 0.0 6.5e-12 45.6 0.0 1.0 1 0 0 1 1 1 1 Acid Phosphatase DUF2608 PF11019.8 ORF109658 - 4.1e-05 23.2 0.0 4.6e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2608) DUF3880 PF12996.7 ORF109658 - 0.069 13.2 0.0 0.083 13.0 0.0 1.1 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) Xlink PF00193.17 ORF108780 - 0.059 13.8 0.1 0.094 13.1 0.1 1.4 1 1 1 2 2 2 0 Extracellular link domain zinc_ribbon_9 PF14369.6 ORF108780 - 0.28 11.5 3.8 0.44 10.9 3.8 1.4 1 0 0 1 1 1 0 zinc-ribbon U-box PF04564.15 ORF108685 - 0.0098 16.1 0.1 0.014 15.6 0.1 1.3 1 1 0 1 1 1 1 U-box domain Sad1_UNC PF07738.13 ORF108685 - 0.026 14.6 0.0 0.027 14.5 0.0 1.1 1 0 0 1 1 1 0 Sad1 / UNC-like C-terminal MORN PF02493.20 ORF108287 - 1.6e-05 24.5 11.8 0.0002 21.0 1.6 4.4 4 1 0 4 4 4 3 MORN repeat zf-RING_14 PF17978.1 ORF107965 - 0.11 12.9 5.2 0.13 12.7 5.2 1.1 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain ADK_lid PF05191.14 ORF107965 - 0.22 11.5 12.1 0.23 11.5 2.5 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zinc-ribbons_6 PF07191.12 ORF107965 - 2.2 8.3 15.1 0.083 12.9 8.2 2.0 1 1 1 2 2 2 0 zinc-ribbons zf-H2C2_2 PF13465.6 ORF107965 - 9.4 6.9 12.6 6.1 7.5 1.1 3.0 3 0 0 3 3 3 0 Zinc-finger double domain zf-C4 PF00105.18 ORF107624 - 0.021 15.2 0.7 0.029 14.8 0.7 1.3 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) Sporozoite_P67 PF05642.11 ORF107558 - 0.03 12.4 0.6 0.03 12.4 0.6 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF2981 PF11200.8 ORF107222 - 0.26 11.0 1.4 0.26 11.0 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) Fur_reg_FbpA PF13076.6 ORF107023 - 0.041 13.6 0.1 0.068 12.9 0.1 1.4 1 0 0 1 1 1 0 Fur-regulated basic protein A Tautomerase PF01361.21 ORF106904 - 0.00022 21.1 0.1 0.00032 20.6 0.1 1.3 1 0 0 1 1 1 1 Tautomerase enzyme MIF PF01187.18 ORF106904 - 0.0068 16.7 0.1 0.0075 16.6 0.1 1.1 1 0 0 1 1 1 1 Macrophage migration inhibitory factor (MIF) DNA_pol_alpha_N PF12254.8 ORF106848 - 0.036 14.1 0.0 0.049 13.7 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal PPTA PF01239.22 ORF106807 - 0.15 11.8 0.2 0.25 11.2 0.2 1.3 1 0 0 1 1 1 0 Protein prenyltransferase alpha subunit repeat DX PF01666.17 ORF105955 - 0.034 14.6 0.3 0.041 14.3 0.3 1.1 1 0 0 1 1 1 0 DX module Gtr1_RagA PF04670.12 ORF105495 - 0.12 11.7 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region QRPTase_C PF01729.19 ORF10471 - 0.13 12.1 0.3 0.13 12.0 0.3 1.1 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain ERbeta_N PF12497.8 ORF104542 - 0.086 12.6 0.7 3.6 7.4 0.1 2.2 1 1 1 2 2 2 0 Estrogen receptor beta Kringle PF00051.18 ORF104519 - 0.084 13.2 0.0 0.096 13.0 0.0 1.1 1 0 0 1 1 1 0 Kringle domain Plasmid_parti PF01672.16 ORF104183 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein SIKE PF05769.11 ORF104119 - 0.00019 21.4 2.5 0.00023 21.2 2.5 1.1 1 0 0 1 1 1 1 SIKE family YabA PF06156.13 ORF104119 - 0.01 16.5 1.4 0.012 16.3 1.4 1.1 1 0 0 1 1 1 0 Initiation control protein YabA Chordopox_A15 PF05846.12 ORF104119 - 0.051 13.8 0.4 0.051 13.8 0.4 1.1 1 0 0 1 1 1 0 Chordopoxvirus A15 protein APC_N_CC PF16689.5 ORF104119 - 5 7.3 8.9 10 6.3 6.2 2.5 1 1 1 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain RINGv PF12906.7 ORF10382 - 0.0065 16.6 0.6 0.009 16.1 0.6 1.3 1 0 0 1 1 1 1 RING-variant domain DUF4675 PF15720.5 ORF103576 - 0.0077 16.0 3.0 0.009 15.8 3.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4675) DUF4522 PF15022.6 ORF103513 - 0.014 15.7 1.5 0.015 15.5 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) Flu_M2 PF00599.17 ORF103078 - 0.16 12.1 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 Influenza Matrix protein (M2) DUF1054 PF06335.12 ORF10285 - 0.07 13.0 0.0 0.073 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Ribosomal_L18_c PF14204.6 ORF102398 - 1.1e-05 26.3 5.7 1.1e-05 26.3 5.7 1.7 2 0 0 2 2 2 1 Ribosomal L18 C-terminal region DUF1943 PF09172.11 ORF102398 - 0.65 9.2 5.1 0.72 9.0 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Sec62 PF03839.16 ORF102398 - 7.1 6.1 7.2 7.3 6.0 7.2 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 UPF0016 PF01169.19 ORF10106 - 3.6e-14 52.9 5.5 4e-14 52.7 5.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0016 DUF2530 PF10745.9 ORF10106 - 0.24 11.6 2.8 0.31 11.3 2.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) Biliv-reduc_cat PF09166.10 ORF101005 - 0.03 14.6 3.3 0.1 12.9 0.7 2.2 1 1 1 2 2 2 0 Biliverdin reductase, catalytic DUF979 PF06166.12 ORF101005 - 0.06 12.5 0.6 0.065 12.4 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF979) Sugarporin_N PF11471.8 ORF10074 - 1.7 8.7 5.0 4.3 7.4 5.0 1.6 1 1 0 1 1 1 0 Maltoporin periplasmic N-terminal extension Spt46 PF17734.1 ORF100610 - 0.14 11.9 0.2 0.17 11.6 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 CvfB_WH PF17783.1 ORF100021 - 0.15 11.9 0.1 0.39 10.6 0.1 1.8 1 1 0 1 1 1 0 CvfB-like winged helix domain Peptidase_M1_N PF17900.1 NODE_74882_length_211_cov_0.892045_g66941_i0forward_frame_1 - 0.11 12.6 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Peptidase M1 N-terminal domain NapB PF03892.14 NODE_74880_length_211_cov_0.903409_g66939_i0reverse_frame_1 - 0.042 13.8 2.0 0.042 13.8 2.0 1.4 1 1 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) SASRP1 PF15160.6 NODE_74878_length_211_cov_0.903409_g66937_i0reverse_frame_1 - 0.13 11.9 1.6 0.15 11.7 1.6 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 DUF5582 PF17819.1 NODE_74878_length_211_cov_0.903409_g66937_i0forward_frame_1 - 0.042 14.3 0.0 0.059 13.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5582) DUF5586 PF17824.1 NODE_74878_length_211_cov_0.903409_g66937_i0forward_frame_1 - 0.042 13.0 0.0 0.042 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5586) RNA_pol_N PF01194.17 NODE_74874_length_211_cov_0.903409_g66933_i0forward_frame_1 - 1.7 9.0 8.0 3.6 7.9 8.0 1.6 1 1 0 1 1 1 0 RNA polymerases N / 8 kDa subunit PNPase_C PF12111.8 NODE_74869_length_211_cov_0.903409_g66928_i0forward_frame_1 - 0.09 12.2 0.2 0.14 11.6 0.2 1.3 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal DUF2487 PF10673.9 NODE_74865_length_211_cov_0.909091_g66924_i0forward_frame_1 - 0.016 15.2 0.0 0.018 15.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2487) ORMDL PF04061.14 NODE_74850_length_211_cov_0.909091_g66909_i0reverse_frame_1 - 0.041 13.7 0.1 0.057 13.2 0.0 1.3 1 1 0 1 1 1 0 ORMDL family DSL PF01414.19 NODE_74850_length_211_cov_0.909091_g66909_i0forward_frame_1 - 0.081 13.2 2.5 0.1 12.9 2.5 1.3 1 1 0 1 1 1 0 Delta serrate ligand Adeno_E3_CR2 PF02439.15 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.0083 15.9 3.1 0.017 14.8 3.1 1.6 1 0 0 1 1 1 1 Adenovirus E3 region protein CR2 HemY_N PF07219.13 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.039 14.1 1.8 0.039 14.1 1.8 1.1 1 0 0 1 1 1 0 HemY protein N-terminus Baculo_11_kDa PF06143.11 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.054 13.1 2.2 0.067 12.8 2.2 1.1 1 0 0 1 1 1 0 Baculovirus 11 kDa family RCR PF12273.8 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.067 13.8 1.8 0.092 13.4 1.8 1.3 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red TMEM154 PF15102.6 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.14 12.0 1.7 0.16 11.9 1.7 1.1 1 0 0 1 1 1 0 TMEM154 protein family EphA2_TM PF14575.6 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.25 12.2 3.1 0.45 11.4 3.1 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Herpes_pp85 PF04637.12 NODE_74847_length_211_cov_0.914773_g66906_i0forward_frame_1 - 0.038 12.4 0.1 0.04 12.4 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Pentapeptide PF00805.22 NODE_74827_length_211_cov_1.107955_g66886_i0reverse_frame_1 - 0.031 13.9 0.1 0.043 13.5 0.1 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (8 copies) Sugar_tr PF00083.24 NODE_74826_length_211_cov_1.107955_g66885_i0forward_frame_1 - 7.4e-07 28.4 1.9 0.011 14.6 0.2 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 NODE_74826_length_211_cov_1.107955_g66885_i0forward_frame_1 - 0.056 12.3 2.2 0.064 12.2 2.2 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily Nup88 PF10168.9 NODE_74823_length_211_cov_1.125000_g66882_i0forward_frame_1 - 0.078 10.8 0.0 0.078 10.8 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore component Crr6 PF08847.11 NODE_74818_length_211_cov_1.136364_g66877_i0reverse_frame_1 - 0.15 11.7 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Chlororespiratory reduction 6 CtsR_C PF17727.1 NODE_74815_length_211_cov_1.147727_g66874_i0forward_frame_1 - 0.2 11.8 0.0 0.27 11.4 0.0 1.2 1 0 0 1 1 1 0 CtsR C-terminal dimerization domain MipZ PF09140.11 NODE_74806_length_211_cov_1.204545_g66865_i0forward_frame_1 - 0.041 13.2 0.1 0.043 13.1 0.1 1.1 1 0 0 1 1 1 0 ATPase MipZ CAAD PF14159.6 NODE_74806_length_211_cov_1.204545_g66865_i0forward_frame_1 - 0.13 12.2 0.3 0.16 11.8 0.3 1.1 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase nec1 PF10379.9 NODE_74804_length_211_cov_1.215909_g66863_i0forward_frame_1 - 0.032 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Virulence protein nec1 Ig_C17orf99 PF17736.1 NODE_74794_length_211_cov_1.295455_g66853_i0reverse_frame_1 - 0.02 14.9 0.1 0.071 13.2 0.1 1.8 1 1 1 2 2 2 0 C17orf99 Ig domain Ribosomal_L19e PF01280.20 NODE_74791_length_211_cov_1.306818_g66850_i0reverse_frame_1 - 0.0066 16.5 0.0 0.0073 16.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L19e RPAP2_Rtr1 PF04181.13 NODE_74791_length_211_cov_1.306818_g66850_i0reverse_frame_1 - 0.015 15.6 0.0 0.053 13.8 0.0 1.8 1 1 0 1 1 1 0 Rtr1/RPAP2 family Raco_middle PF17651.1 NODE_74784_length_211_cov_1.357955_g66843_i0reverse_frame_1 - 0.1 12.3 1.9 0.11 12.2 1.9 1.0 1 0 0 1 1 1 0 RACo middle region HATPase_c_2 PF13581.6 NODE_74782_length_211_cov_1.357955_g66841_i0reverse_frame_1 - 0.061 13.3 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Dmrt1 PF12374.8 NODE_74779_length_211_cov_1.357955_g66838_i0forward_frame_1 - 0.093 13.2 2.4 0.17 12.3 2.4 1.5 1 1 0 1 1 1 0 Double-sex mab3 related transcription factor 1 DUF3629 PF12302.8 NODE_74775_length_211_cov_1.363636_g66834_i0forward_frame_1 - 0.08 12.4 0.2 0.086 12.3 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3629) 7TM_GPCR_Sra PF02117.16 NODE_74769_length_211_cov_1.363636_g66828_i0reverse_frame_1 - 0.07 12.0 4.9 0.078 11.8 4.9 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sra DUF5362 PF17319.2 NODE_74767_length_211_cov_1.363636_g66826_i0reverse_frame_1 - 0.0062 16.3 0.1 0.0071 16.2 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5362) SecD_SecF PF02355.16 NODE_74766_length_211_cov_1.363636_g66825_i0forward_frame_1 - 0.026 13.9 2.4 0.028 13.8 2.4 1.0 1 0 0 1 1 1 0 Protein export membrane protein Peptidase_M44 PF03410.13 NODE_74763_length_211_cov_1.386364_g66822_i0forward_frame_1 - 0.034 12.7 2.1 0.037 12.6 2.1 1.0 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox TMEM70 PF06979.12 NODE_74752_length_211_cov_1.454545_g66811_i0forward_frame_1 - 0.074 13.5 0.2 0.087 13.2 0.2 1.1 1 0 0 1 1 1 0 Assembly, mitochondrial proton-transport ATP synth complex GBR2_CC PF18455.1 NODE_74744_length_211_cov_1.522727_g66803_i0forward_frame_1 - 0.02 15.0 1.0 0.03 14.4 1.0 1.3 1 0 0 1 1 1 0 Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain BatA PF07584.11 NODE_74728_length_211_cov_1.590909_g66787_i0forward_frame_1 - 0.048 14.0 0.1 0.056 13.8 0.1 1.1 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal KRAB PF01352.27 NODE_74717_length_211_cov_1.664773_g66776_i0forward_frame_1 - 0.094 12.4 0.0 0.19 11.4 0.0 1.6 1 0 0 1 1 1 0 KRAB box Myb_DNA-binding PF00249.31 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 2.5e-16 59.6 0.5 2.3e-11 43.7 0.1 2.0 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 2.1e-13 50.3 2.4 7.3e-07 29.3 0.2 2.0 1 1 1 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 0.0028 17.5 0.4 0.0042 16.9 0.2 1.4 1 1 0 1 1 1 1 Myb DNA-binding like SANT_DAMP1_like PF16282.5 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 0.0045 17.2 0.1 0.0055 16.9 0.1 1.3 1 0 0 1 1 1 1 SANT/Myb-like domain of DAMP1 Myb_DNA-bind_5 PF13873.6 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 0.028 14.5 0.5 0.46 10.6 0.1 2.3 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain PriCT_2 PF08707.11 NODE_74715_length_211_cov_1.676136_g66774_i0reverse_frame_1 - 0.043 14.2 0.3 0.075 13.4 0.1 1.5 2 0 0 2 2 2 0 Primase C terminal 2 (PriCT-2) PDH_E1_M PF17831.1 NODE_74714_length_211_cov_1.693182_g66773_i0reverse_frame_1 - 0.28 10.7 0.8 0.32 10.5 0.8 1.1 1 0 0 1 1 1 0 Pyruvate dehydrogenase E1 component middle domain Pkinase PF00069.25 NODE_74709_length_211_cov_1.721591_g66768_i0forward_frame_1 - 6e-10 38.9 0.0 6e-10 38.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain UCH PF00443.29 NODE_74703_length_211_cov_1.784091_g66762_i0reverse_frame_1 - 4.5e-10 39.5 0.1 5.7e-10 39.1 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase TRP PF06011.12 NODE_74702_length_211_cov_1.784091_g66761_i0reverse_frame_1 - 0.0052 15.6 1.7 0.0052 15.6 1.7 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF2664 PF10867.8 NODE_74699_length_211_cov_1.795455_g66758_i0reverse_frame_1 - 0.0017 18.8 0.1 0.0017 18.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2664) Neurokinin_B PF03823.14 NODE_74696_length_211_cov_1.806818_g66755_i0forward_frame_1 - 0.0086 16.1 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 Neurokinin B HeH PF12949.7 NODE_74695_length_211_cov_1.806818_g66754_i0reverse_frame_1 - 0.037 13.7 0.1 0.056 13.2 0.1 1.3 1 0 0 1 1 1 0 HeH/LEM domain CRAL_TRIO PF00650.20 NODE_74694_length_211_cov_1.818182_g66753_i0reverse_frame_1 - 5.8e-07 29.4 0.0 5.8e-07 29.4 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain FSA_C PF10479.9 NODE_74692_length_211_cov_1.835227_g66751_i0reverse_frame_1 - 0.61 8.2 8.3 0.64 8.1 8.3 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Mucin PF01456.17 NODE_74692_length_211_cov_1.835227_g66751_i0reverse_frame_1 - 0.71 9.9 18.8 0.87 9.6 18.8 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein COX8 PF02285.15 NODE_74689_length_211_cov_1.869318_g66748_i0reverse_frame_1 - 0.018 14.9 3.0 0.018 14.9 3.0 1.8 2 0 0 2 2 2 0 Cytochrome oxidase c subunit VIII DndE PF08870.11 NODE_74689_length_211_cov_1.869318_g66748_i0reverse_frame_1 - 0.068 13.4 0.0 0.084 13.1 0.0 1.1 1 0 0 1 1 1 0 DNA sulphur modification protein DndE cNMP_binding PF00027.29 NODE_74683_length_211_cov_1.914773_g66742_i0forward_frame_1 - 0.027 14.5 0.0 0.031 14.3 0.0 1.2 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Pkinase PF00069.25 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 4.9e-20 72.0 0.9 4.9e-20 72.0 0.9 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 1.1e-13 51.0 0.1 1.3e-13 50.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.0013 18.2 0.1 0.0013 18.2 0.1 1.0 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.0017 17.7 0.1 0.0017 17.7 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.0086 15.1 0.4 0.01 14.8 0.4 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.011 14.6 0.2 0.011 14.6 0.2 1.0 1 0 0 1 1 1 0 Fungal protein kinase Seadorna_VP7 PF07387.11 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.02 14.0 0.0 0.02 14.0 0.0 1.0 1 0 0 1 1 1 0 Seadornavirus VP7 DCB PF16213.5 NODE_74680_length_211_cov_1.926136_g66739_i0reverse_frame_1 - 8.7e-06 25.5 0.4 1e-05 25.3 0.4 1.0 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 DUF1035 PF06281.12 NODE_74673_length_211_cov_2.000000_g66732_i0forward_frame_1 - 2.9 8.0 8.4 0.8 9.8 4.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1035) DUF5094 PF17015.5 NODE_74672_length_211_cov_2.005682_g66731_i0reverse_frame_1 - 0.11 12.6 1.7 0.12 12.4 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) Receptor_IA-2 PF11548.8 NODE_74669_length_211_cov_2.028409_g66728_i0reverse_frame_1 - 0.12 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase receptor IA-2 tRNA_bind_2 PF13725.6 NODE_74667_length_211_cov_2.034091_g66726_i0forward_frame_1 - 0.37 10.5 3.3 0.38 10.4 3.3 1.0 1 0 0 1 1 1 0 Possible tRNA binding domain Ldr_toxin PF13940.6 NODE_74661_length_211_cov_2.119318_g66720_i0reverse_frame_1 - 0.16 12.1 0.3 0.25 11.4 0.3 1.3 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system PRIMA1 PF16101.5 NODE_74660_length_211_cov_2.119318_g66719_i0forward_frame_1 - 1.1 9.3 5.7 1.2 9.2 5.7 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 THEG4 PF15834.5 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 0.31 11.0 2.5 0.34 10.9 2.5 1.0 1 0 0 1 1 1 0 Testis highly expressed protein 4 DUF1387 PF07139.11 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 4.9 6.8 21.9 5.4 6.7 21.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1387) MscS_TM PF12794.7 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 5.2 5.8 7.1 5.5 5.7 7.1 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 FAM176 PF14851.6 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 6.6 6.4 14.3 7.4 6.2 14.3 1.1 1 0 0 1 1 1 0 FAM176 family DUF3464 PF11947.8 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 6.7 6.5 15.0 6.8 6.4 15.0 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Eapp_C PF10238.9 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 7.9 6.5 11.2 8.3 6.5 11.2 1.2 1 0 0 1 1 1 0 E2F-associated phosphoprotein AP3D1 PF06375.11 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 8.9 6.5 26.3 10 6.3 26.3 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 MAP17 PF15807.5 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 9.3 6.5 11.3 9.9 6.4 11.3 1.3 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 WD40 PF00400.32 NODE_74650_length_211_cov_2.232955_g66709_i0forward_frame_1 - 1.2e-06 29.1 0.2 0.06 14.2 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat COG5 PF10392.9 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.019 15.1 0.4 0.023 14.8 0.4 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 UPF0242 PF06785.11 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.021 14.9 0.4 0.047 13.8 0.4 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Fib_alpha PF08702.10 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.026 14.7 1.0 0.066 13.4 1.0 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Spc42p PF11544.8 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.053 13.5 2.0 6.7 6.8 0.1 2.2 2 0 0 2 2 2 0 Spindle pole body component Spc42p DUF4407 PF14362.6 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.12 11.7 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Peptidase_M1 PF01433.20 NODE_74638_length_211_cov_2.329545_g66697_i0reverse_frame_1 - 8.5e-25 87.6 0.5 8.9e-25 87.5 0.5 1.0 1 0 0 1 1 1 1 Peptidase family M1 domain OSCP PF00213.18 NODE_74637_length_211_cov_2.443182_g66696_i0forward_frame_1 - 9e-09 35.7 0.5 1e-08 35.5 0.5 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit Nucleos_tra2_C PF07662.13 NODE_74634_length_211_cov_2.562500_g66693_i0forward_frame_1 - 9.7e-19 68.0 2.6 1.1e-18 67.9 2.6 1.0 1 0 0 1 1 1 1 Na+ dependent nucleoside transporter C-terminus zf-CHC2 PF01807.20 NODE_74624_length_211_cov_2.721591_g66683_i0reverse_frame_1 - 0.096 12.5 0.1 0.1 12.4 0.1 1.1 1 0 0 1 1 1 0 CHC2 zinc finger DUF2686 PF10887.8 NODE_74622_length_211_cov_2.732955_g66681_i0reverse_frame_1 - 0.00015 20.9 0.1 0.00019 20.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2686) Lamprin PF06403.11 NODE_74615_length_211_cov_2.863636_g66674_i0forward_frame_1 - 2.8 7.9 7.0 0.38 10.7 2.1 1.8 1 1 1 2 2 2 0 Lamprin PilN_bio_d PF18222.1 NODE_74614_length_211_cov_2.909091_g66673_i0forward_frame_1 - 0.12 12.8 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 PilN biogenesis protein dimerization domain Clc-like PF07062.12 NODE_74614_length_211_cov_2.909091_g66673_i0forward_frame_1 - 0.14 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Clc-like GDP_Man_Dehyd PF16363.5 NODE_74609_length_211_cov_3.181818_g66668_i0reverse_frame_1 - 7.7e-10 38.7 0.0 8.3e-10 38.6 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_74609_length_211_cov_3.181818_g66668_i0reverse_frame_1 - 4.2e-08 32.9 0.0 4.7e-08 32.8 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 NODE_74609_length_211_cov_3.181818_g66668_i0reverse_frame_1 - 0.061 12.5 0.0 0.066 12.4 0.0 1.0 1 0 0 1 1 1 0 Male sterility protein Mt_ATP-synt_B PF05405.14 NODE_74598_length_211_cov_6.698864_g66657_i0forward_frame_1 - 0.024 14.3 0.2 0.031 13.9 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) RNA_pol_Rpo13 PF12136.8 NODE_74596_length_211_cov_8.267045_g66655_i0forward_frame_1 - 0.084 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpo13 subunit HTH domain DUF448 PF04296.13 NODE_74591_length_211_cov_23.295455_g66650_i0reverse_frame_1 - 0.1 12.5 0.2 0.32 10.9 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF448) UPF0239 PF06783.11 NODE_74586_length_211_cov_26.750000_g66645_i0reverse_frame_1 - 2.8 8.2 6.5 4.7 7.5 6.5 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0239) RNA_pol_A_CTD PF03118.15 NODE_74583_length_211_cov_29.994318_g66642_i0forward_frame_1 - 0.17 11.7 0.2 0.3 10.9 0.0 1.5 2 0 0 2 2 2 0 Bacterial RNA polymerase, alpha chain C terminal domain EpCAM_N PF18635.1 NODE_74577_length_211_cov_37.556818_g66636_i0reverse_frame_1 - 0.09 13.0 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Epithelial cell adhesion molecule N-terminal domain LANC_like PF05147.13 NODE_74556_length_211_cov_55.863636_g66615_i0forward_frame_1 - 0.24 9.9 0.0 0.26 9.8 0.0 1.0 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein S1 PF00575.23 NODE_74545_length_211_cov_69.153409_g66604_i0reverse_frame_1 - 0.059 13.7 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 S1 RNA binding domain CCDC71L PF15374.6 NODE_74541_length_211_cov_71.164773_g66600_i0forward_frame_1 - 0.13 11.5 3.4 0.15 11.3 3.4 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 71L SUIM_assoc PF16619.5 NODE_74541_length_211_cov_71.164773_g66600_i0forward_frame_1 - 1.3 9.2 9.2 0.15 12.1 3.2 1.9 1 1 1 2 2 2 0 Unstructured region C-term to UIM in Ataxin3 ADAM17_MPD PF16698.5 NODE_74528_length_211_cov_112.204545_g66587_i0reverse_frame_1 - 0.18 12.2 1.5 0.22 11.9 1.5 1.1 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 DUF434 PF04256.12 NODE_74525_length_211_cov_119.761364_g66584_i0forward_frame_1 - 0.015 14.9 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF434) ABC2_membrane_3 PF12698.7 NODE_74519_length_211_cov_162.403409_g66578_i0forward_frame_1 - 0.094 11.8 1.0 0.087 11.9 1.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Birna_RdRp PF04197.12 NODE_74510_length_211_cov_4309.625000_g66569_i0forward_frame_1 - 0.13 10.6 0.1 0.16 10.3 0.1 1.0 1 0 0 1 1 1 0 Birnavirus RNA dependent RNA polymerase (VP1) ToxB_N PF18224.1 NODE_74504_length_212_cov_0.892655_g66563_i0forward_frame_1 - 0.11 12.4 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 ToxB N-terminal domain YjcB PF15940.5 NODE_74491_length_212_cov_0.903955_g66550_i0reverse_frame_1 - 0.081 13.1 0.0 0.095 12.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function DUF3914 PF13053.6 NODE_74480_length_212_cov_0.903955_g66539_i0reverse_frame_1 - 0.03 14.7 0.1 0.03 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3914) TPP_enzyme_C PF02775.21 NODE_74475_length_212_cov_0.915254_g66534_i0forward_frame_1 - 0.14 11.9 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DUF3530 PF12048.8 NODE_74474_length_212_cov_0.920904_g66533_i0reverse_frame_1 - 0.11 11.9 3.3 0.12 11.7 3.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) DUF2749 PF10907.8 NODE_74474_length_212_cov_0.920904_g66533_i0forward_frame_1 - 6.4 7.0 12.7 12 6.1 12.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2749) DUF677 PF05055.12 NODE_74474_length_212_cov_0.920904_g66533_i0forward_frame_1 - 6.6 5.5 5.8 6.6 5.5 5.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF677) DUF5009 PF16401.5 NODE_74462_length_212_cov_1.045198_g66521_i0reverse_frame_1 - 0.19 11.2 0.0 0.22 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) zf-C3HC PF07967.13 NODE_74456_length_212_cov_1.107345_g66515_i0forward_frame_1 - 0.011 15.8 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 0 C3HC zinc finger-like DUF1478 PF07349.11 NODE_74451_length_212_cov_1.124294_g66510_i0reverse_frame_1 - 0.036 14.0 0.7 0.041 13.8 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1478) DegS PF05384.11 NODE_74449_length_212_cov_1.129944_g66508_i0reverse_frame_1 - 0.021 14.3 0.1 0.023 14.2 0.1 1.0 1 0 0 1 1 1 0 Sensor protein DegS Arylesterase PF01731.20 NODE_74446_length_212_cov_1.129944_g66505_i0forward_frame_1 - 0.015 15.5 0.5 0.017 15.3 0.5 1.2 1 0 0 1 1 1 0 Arylesterase Pombe_5TM PF09437.10 NODE_74446_length_212_cov_1.129944_g66505_i0forward_frame_1 - 0.045 13.4 2.4 0.053 13.2 2.4 1.0 1 0 0 1 1 1 0 Pombe specific 5TM protein DUF2682 PF10909.8 NODE_74446_length_212_cov_1.129944_g66505_i0forward_frame_1 - 0.048 14.2 0.2 0.055 14.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2682) Lamprin PF06403.11 NODE_74444_length_212_cov_1.129944_g66503_i0forward_frame_1 - 0.032 14.2 9.8 0.27 11.2 9.8 2.0 1 1 0 1 1 1 0 Lamprin Chorion_1 PF01723.16 NODE_74444_length_212_cov_1.129944_g66503_i0forward_frame_1 - 0.046 13.7 7.2 0.1 12.6 7.2 1.7 1 1 0 1 1 1 0 Chorion protein Transglut_core3 PF13471.6 NODE_74443_length_212_cov_1.129944_g66502_i0reverse_frame_1 - 0.39 10.6 2.5 0.45 10.4 2.5 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily Fer4_22 PF17179.4 NODE_74442_length_212_cov_1.129944_g66501_i0reverse_frame_1 - 0.0072 17.1 0.6 0.0079 17.0 0.6 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain zf-RRPl_C4 PF17026.5 NODE_74442_length_212_cov_1.129944_g66501_i0reverse_frame_1 - 0.021 14.9 0.1 0.023 14.8 0.1 1.1 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type DUF267 PF03268.14 NODE_74439_length_212_cov_1.146893_g66498_i0forward_frame_1 - 0.0029 16.5 2.7 0.003 16.5 2.7 1.0 1 0 0 1 1 1 1 Caenorhabditis protein of unknown function, DUF267 DUF3671 PF12420.8 NODE_74439_length_212_cov_1.146893_g66498_i0forward_frame_1 - 0.039 14.0 2.3 0.046 13.8 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function T4-Gluco-transf PF09198.10 NODE_74426_length_212_cov_1.254237_g66485_i0forward_frame_1 - 0.035 13.7 0.4 0.051 13.2 0.4 1.3 1 0 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase RadC PF04002.15 NODE_74426_length_212_cov_1.254237_g66485_i0forward_frame_1 - 0.15 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 RadC-like JAB domain Retrotran_gag_2 PF14223.6 NODE_74423_length_212_cov_1.276836_g66482_i0reverse_frame_1 - 7.6e-05 22.4 0.0 8.7e-05 22.2 0.0 1.0 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type Clr2_transil PF16761.5 NODE_74416_length_212_cov_1.344633_g66475_i0reverse_frame_1 - 0.18 12.6 0.0 0.24 12.2 0.0 1.1 1 0 0 1 1 1 0 Transcription-silencing protein, cryptic loci regulator Clr2 PRT_C PF08372.10 NODE_74406_length_212_cov_1.355932_g66465_i0reverse_frame_1 - 1.1 9.0 4.7 1.2 8.9 4.7 1.1 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal TcdB_N PF12918.7 NODE_74404_length_212_cov_1.355932_g66463_i0forward_frame_1 - 0.0046 17.2 0.6 0.0064 16.8 0.6 1.3 1 0 0 1 1 1 1 TcdB toxin N-terminal helical domain PUB PF09409.10 NODE_74404_length_212_cov_1.355932_g66463_i0forward_frame_1 - 0.055 13.4 0.2 0.066 13.2 0.2 1.1 1 0 0 1 1 1 0 PUB domain JMY PF15871.5 NODE_74404_length_212_cov_1.355932_g66463_i0forward_frame_1 - 0.059 12.7 0.0 0.064 12.6 0.0 1.0 1 0 0 1 1 1 0 Junction-mediating and -regulatory protein Spo7 PF03907.13 NODE_74392_length_212_cov_1.418079_g66451_i0reverse_frame_1 - 0.018 14.5 0.4 0.023 14.2 0.4 1.1 1 0 0 1 1 1 0 Spo7-like protein TolA_bind_tri PF16331.5 NODE_74381_length_212_cov_1.474576_g66440_i0forward_frame_1 - 2.2e-06 27.6 3.7 3.1e-06 27.2 3.7 1.2 1 0 0 1 1 1 1 TolA binding protein trimerisation DpnII-MboI PF18742.1 NODE_74362_length_212_cov_1.576271_g66421_i0forward_frame_1 - 0.0012 18.5 0.3 0.0013 18.4 0.3 1.1 1 0 0 1 1 1 1 REase_DpnII-MboI Anthrax_toxA PF03497.16 NODE_74361_length_212_cov_1.576271_g66420_i0forward_frame_1 - 0.2 11.8 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 Anthrax toxin LF subunit HisK_N PF09385.10 NODE_74353_length_212_cov_1.581921_g66412_i0forward_frame_1 - 0.065 13.2 0.5 0.084 12.8 0.5 1.1 1 0 0 1 1 1 0 Histidine kinase N terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks343.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks343.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks343.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks343.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cyclase PF04199.13 NODE_74348_length_212_cov_1.649718_g66407_i0forward_frame_1 - 0.13 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Putative cyclase COX_ARM PF06481.14 NODE_74340_length_212_cov_1.711864_g66399_i0reverse_frame_1 - 0.024 14.5 0.1 0.035 14.0 0.1 1.2 1 0 0 1 1 1 0 COX Aromatic Rich Motif Flagellar_put PF12611.8 NODE_74340_length_212_cov_1.711864_g66399_i0reverse_frame_1 - 0.092 12.5 0.2 0.14 11.9 0.2 1.3 1 0 0 1 1 1 0 Putative flagellar DUF417 PF04224.12 NODE_74339_length_212_cov_1.717514_g66398_i0forward_frame_1 - 0.077 12.6 0.0 0.078 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF417 PseudoU_synth_2 PF00849.22 NODE_74336_length_212_cov_1.751412_g66395_i0reverse_frame_1 - 8.2e-08 32.5 0.0 8.8e-08 32.4 0.0 1.0 1 0 0 1 1 1 1 RNA pseudouridylate synthase AbiEi_1 PF09407.10 NODE_74334_length_212_cov_1.768362_g66393_i0reverse_frame_1 - 0.095 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 AbiEi antitoxin C-terminal domain Lamprin PF06403.11 NODE_74329_length_212_cov_1.785311_g66388_i0forward_frame_1 - 0.015 15.3 4.1 0.016 15.1 4.1 1.1 1 0 0 1 1 1 0 Lamprin Transketolase_C PF02780.20 NODE_74313_length_212_cov_1.881356_g66372_i0reverse_frame_1 - 0.0037 17.1 0.2 0.0046 16.8 0.2 1.0 1 0 0 1 1 1 1 Transketolase, C-terminal domain ARA70 PF12489.8 NODE_74312_length_212_cov_1.887006_g66371_i0forward_frame_1 - 0.0086 16.3 1.3 0.0089 16.2 1.3 1.0 1 0 0 1 1 1 1 Nuclear coactivator FtsL PF04999.13 NODE_74311_length_212_cov_1.898305_g66370_i0reverse_frame_1 - 0.0042 17.1 0.1 0.0048 16.9 0.1 1.0 1 0 0 1 1 1 1 Cell division protein FtsL IlvB_leader PF08049.11 NODE_74306_length_212_cov_1.960452_g66365_i0reverse_frame_1 - 0.093 12.7 2.7 4.7 7.2 0.9 2.3 2 0 0 2 2 2 0 IlvB leader peptide DUF1765 PF08578.10 NODE_74305_length_212_cov_1.983051_g66364_i0reverse_frame_1 - 0.1 13.1 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1765) Flavodoxin_1 PF00258.25 NODE_74303_length_212_cov_1.988701_g66362_i0forward_frame_1 - 0.00058 20.1 0.0 0.00067 19.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin YhfZ_C PF14503.6 NODE_74301_length_212_cov_2.022599_g66360_i0forward_frame_1 - 0.17 11.4 0.1 0.21 11.1 0.1 1.1 1 0 0 1 1 1 0 YhfZ C-terminal domain YdfZ PF14001.6 NODE_74298_length_212_cov_2.028249_g66357_i0forward_frame_1 - 2.8e-13 50.0 0.1 3.7e-13 49.7 0.1 1.2 1 0 0 1 1 1 1 YdfZ protein RHIM PF12721.7 NODE_74297_length_212_cov_2.045198_g66356_i0forward_frame_1 - 0.031 14.8 0.5 0.041 14.4 0.5 1.3 1 0 0 1 1 1 0 RIP homotypic interaction motif IRK_N PF08466.10 NODE_74295_length_212_cov_2.073446_g66354_i0forward_frame_1 - 0.031 14.4 0.0 0.87 9.8 0.0 2.7 3 1 0 3 3 3 0 Inward rectifier potassium channel N-terminal Phage-A118_gp45 PF10653.9 NODE_74289_length_212_cov_2.107345_g66348_i0forward_frame_1 - 0.17 11.9 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein gp45 of Bacteriophage A118 Ras PF00071.22 NODE_74283_length_212_cov_2.197740_g66342_i0forward_frame_1 - 0.00057 19.5 0.1 0.00057 19.5 0.1 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_74283_length_212_cov_2.197740_g66342_i0forward_frame_1 - 0.059 13.6 0.4 0.47 10.7 0.1 1.9 1 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase CHZ PF09649.10 NODE_74278_length_212_cov_2.254237_g66337_i0forward_frame_1 - 0.071 12.6 0.2 0.1 12.1 0.2 1.2 1 0 0 1 1 1 0 Histone chaperone domain CHZ DUF1952 PF09189.10 NODE_74273_length_212_cov_2.350282_g66332_i0forward_frame_1 - 0.14 12.0 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1952) IQCJ-SCHIP1 PF15157.6 NODE_74272_length_212_cov_2.350282_g66331_i0forward_frame_1 - 0.14 12.0 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif DUF1676 PF07898.13 NODE_74270_length_212_cov_2.463277_g66329_i0reverse_frame_1 - 0.69 9.9 9.1 0.8 9.7 9.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF5470 PF17564.2 NODE_74261_length_212_cov_2.559322_g66320_i0forward_frame_1 - 2.2 8.5 5.8 0.66 10.2 3.4 1.4 1 1 1 2 2 2 0 Family of unknown function (DUF5470) SR-25 PF10500.9 NODE_74260_length_212_cov_2.593220_g66319_i0forward_frame_1 - 0.69 9.5 7.4 0.75 9.4 7.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CRIC_ras_sig PF10534.9 NODE_74257_length_212_cov_2.677966_g66316_i0reverse_frame_1 - 0.023 14.9 0.2 0.027 14.6 0.2 1.2 1 0 0 1 1 1 0 Connector enhancer of kinase suppressor of ras Ecm33 PF12454.8 NODE_74254_length_212_cov_2.757062_g66313_i0forward_frame_1 - 1.1 9.5 2.8 1.3 9.2 0.1 2.1 1 1 1 2 2 2 0 GPI-anchored cell wall organization protein Lamprin PF06403.11 NODE_74247_length_212_cov_2.898305_g66306_i0forward_frame_1 - 0.072 13.1 2.5 0.096 12.6 2.5 1.2 1 0 0 1 1 1 0 Lamprin MBR1 PF17058.5 NODE_74241_length_212_cov_3.135593_g66300_i0reverse_frame_1 - 0.013 15.9 0.4 0.013 15.8 0.4 1.0 1 0 0 1 1 1 0 Mitochondrial biogenesis regulation protein 1 Lipoprotein_3 PF00938.17 NODE_74224_length_212_cov_17.237288_g66283_i0reverse_frame_1 - 0.15 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Lipoprotein Helicase_C_4 PF13871.6 NODE_74222_length_212_cov_25.915254_g66281_i0reverse_frame_1 - 0.18 11.5 0.2 0.2 11.3 0.2 1.0 1 0 0 1 1 1 0 C-terminal domain on Strawberry notch homologue OHCU_decarbox PF09349.10 NODE_74219_length_212_cov_31.988701_g66278_i0reverse_frame_1 - 0.06 13.8 0.1 0.063 13.8 0.1 1.1 1 0 0 1 1 1 0 OHCU decarboxylase ETRAMP PF09716.10 NODE_74212_length_212_cov_38.203390_g66271_i0forward_frame_1 - 0.13 12.4 0.2 0.14 12.3 0.2 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Siva PF05458.12 NODE_74211_length_212_cov_38.384181_g66270_i0forward_frame_1 - 0.025 14.3 12.3 0.024 14.3 12.3 1.0 1 0 0 1 1 1 0 Cd27 binding protein (Siva) NLRC4_HD2 PF17776.1 NODE_74202_length_212_cov_47.627119_g66261_i0reverse_frame_1 - 0.065 13.8 0.1 0.066 13.8 0.1 1.1 1 0 0 1 1 1 0 NLRC4 helical domain HD2 T2SS-T3SS_pil_N PF13629.6 NODE_74183_length_212_cov_72.745763_g66242_i0forward_frame_1 - 0.14 11.9 0.0 0.21 11.3 0.0 1.3 1 1 0 1 1 1 0 Pilus formation protein N terminal region ATP_Ca_trans_C PF12424.8 NODE_74179_length_212_cov_81.915254_g66238_i0forward_frame_1 - 0.15 12.6 0.0 0.23 11.9 0.0 1.5 2 0 0 2 2 2 0 Plasma membrane calcium transporter ATPase C terminal SCO1-SenC PF02630.14 NODE_74178_length_212_cov_84.836158_g66237_i0reverse_frame_1 - 0.043 13.7 0.1 0.053 13.4 0.1 1.1 1 0 0 1 1 1 0 SCO1/SenC Transmemb_17 PF09799.9 NODE_74171_length_212_cov_115.508475_g66230_i0forward_frame_1 - 0.05 14.2 1.0 0.067 13.8 1.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein ThiC-associated PF13667.6 NODE_74164_length_212_cov_150.576271_g66223_i0reverse_frame_1 - 0.069 13.0 0.9 0.28 11.1 0.9 1.8 1 1 0 1 1 1 0 ThiC-associated domain Glyco_hydro_38N PF01074.22 NODE_74158_length_212_cov_190.429379_g66217_i0reverse_frame_1 - 2.1e-08 33.9 0.5 2.1e-08 33.9 0.5 1.4 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain Mu-like_Com PF10122.9 NODE_74152_length_212_cov_1473.175141_g66211_i0forward_frame_1 - 0.061 12.8 0.4 0.061 12.8 0.4 1.8 2 0 0 2 2 2 0 Mu-like prophage protein Com EpCAM_N PF18635.1 NODE_74151_length_212_cov_1907.367232_g66210_i0reverse_frame_1 - 0.0013 18.9 0.4 0.0024 18.0 0.4 1.5 1 0 0 1 1 1 1 Epithelial cell adhesion molecule N-terminal domain MSV199 PF10553.9 NODE_74148_length_213_cov_0.876404_g66207_i0reverse_frame_1 - 0.043 14.1 1.3 0.046 14.0 1.3 1.1 1 0 0 1 1 1 0 MSV199 domain PilA4 PF18682.1 NODE_74147_length_213_cov_0.876404_g66206_i0forward_frame_1 - 0.16 12.3 0.0 0.2 12.0 0.0 1.1 1 0 0 1 1 1 0 Pilin A4 F-box-like PF12937.7 NODE_74145_length_213_cov_0.893258_g66204_i0reverse_frame_1 - 0.034 14.0 0.1 0.05 13.5 0.1 1.3 1 0 0 1 1 1 0 F-box-like SPT_ssu-like PF11779.8 NODE_74144_length_213_cov_0.893258_g66203_i0reverse_frame_1 - 0.0059 16.2 0.4 0.0059 16.2 0.4 1.8 1 1 1 2 2 2 1 Small subunit of serine palmitoyltransferase-like DUF5311 PF17238.2 NODE_74144_length_213_cov_0.893258_g66203_i0forward_frame_1 - 0.087 12.7 0.0 0.087 12.7 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5311) Mito_morph_reg PF14972.6 NODE_74143_length_213_cov_0.893258_g66202_i0forward_frame_1 - 0.026 14.1 0.0 0.029 14.0 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator DUF4215 PF13948.6 NODE_74141_length_213_cov_0.898876_g66200_i0forward_frame_1 - 7.9e-11 42.2 22.7 1.4e-09 38.2 13.1 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4215) Bclx_interact PF08945.10 NODE_74141_length_213_cov_0.898876_g66200_i0forward_frame_1 - 0.19 11.5 0.1 0.32 10.8 0.1 1.4 1 0 0 1 1 1 0 Bcl-x interacting, BH3 domain FXa_inhibition PF14670.6 NODE_74141_length_213_cov_0.898876_g66200_i0forward_frame_1 - 4.6 7.6 13.9 7.7 6.9 0.5 2.6 2 1 0 2 2 2 0 Coagulation Factor Xa inhibitory site Toxin_3 PF00537.18 NODE_74141_length_213_cov_0.898876_g66200_i0forward_frame_1 - 6.3 7.1 12.9 9.7e+03 -3.1 13.0 3.0 1 1 0 1 1 1 0 Scorpion toxin-like domain POP1 PF06978.11 NODE_74132_length_213_cov_0.898876_g66191_i0reverse_frame_1 - 0.064 13.2 0.5 0.072 13.1 0.5 1.1 1 0 0 1 1 1 0 Ribonucleases P/MRP protein subunit POP1 Spin-Ssty PF02513.17 NODE_74129_length_213_cov_0.898876_g66188_i0forward_frame_1 - 0.042 13.6 3.9 0.06 13.1 3.9 1.2 1 0 0 1 1 1 0 Spin/Ssty Family HHH_4 PF14490.6 NODE_74126_length_213_cov_0.898876_g66185_i0forward_frame_1 - 0.19 11.7 0.0 0.24 11.4 0.0 1.1 1 0 0 1 1 1 0 Helix-hairpin-helix containing domain E3_binding PF02817.17 NODE_74121_length_213_cov_0.955056_g66180_i0reverse_frame_1 - 0.034 14.5 0.1 0.15 12.4 0.0 1.8 2 0 0 2 2 2 0 e3 binding domain DUF1366 PF07104.11 NODE_74114_length_213_cov_1.005618_g66173_i0reverse_frame_1 - 0.25 11.1 0.0 0.29 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1366) Hom_end_hint PF05203.16 NODE_74113_length_213_cov_1.022472_g66172_i0reverse_frame_1 - 0.13 12.2 0.4 0.14 12.1 0.4 1.1 1 0 0 1 1 1 0 Hom_end-associated Hint HTH_Tnp_Tc3_1 PF11427.8 NODE_74113_length_213_cov_1.022472_g66172_i0forward_frame_1 - 0.001 18.8 0.4 0.0016 18.3 0.4 1.3 1 0 0 1 1 1 1 Tc3 transposase Pox_T4_N PF04491.12 NODE_74112_length_213_cov_1.028090_g66171_i0reverse_frame_1 - 0.039 13.8 0.5 0.06 13.2 0.5 1.3 1 0 0 1 1 1 0 Poxvirus T4 protein, N terminus CusF_Ec PF11604.8 NODE_74103_length_213_cov_1.112360_g66162_i0reverse_frame_1 - 0.052 13.5 0.1 0.32 11.0 0.0 2.0 2 0 0 2 2 2 0 Copper binding periplasmic protein CusF DRTGG PF07085.12 NODE_74102_length_213_cov_1.117978_g66161_i0reverse_frame_1 - 0.15 11.8 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 DRTGG domain Ank_4 PF13637.6 NODE_74102_length_213_cov_1.117978_g66161_i0forward_frame_1 - 0.044 14.4 0.2 0.062 13.9 0.2 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Chloroa_b-bind PF00504.21 NODE_74098_length_213_cov_1.123596_g66157_i0forward_frame_1 - 8.4e-09 36.2 0.0 9.6e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein ASFV_J13L PF05568.11 NODE_74096_length_213_cov_1.123596_g66155_i0forward_frame_1 - 0.2 11.4 0.2 0.18 11.6 0.2 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Myosin_head PF00063.21 NODE_74082_length_213_cov_1.213483_g66141_i0reverse_frame_1 - 4.4e-12 45.0 0.0 4.9e-12 44.9 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) CHDNT PF08073.12 NODE_74081_length_213_cov_1.230337_g66140_i0reverse_frame_1 - 0.079 12.9 0.4 9.1 6.3 0.0 2.1 1 1 1 2 2 2 0 CHDNT (NUC034) domain TMEM117 PF15113.6 NODE_74070_length_213_cov_1.292135_g66129_i0reverse_frame_1 - 2.5 6.9 6.5 2.6 6.9 6.5 1.0 1 0 0 1 1 1 0 TMEM117 protein family Ribonuc_red_sm PF00268.21 NODE_74057_length_213_cov_1.342697_g66116_i0reverse_frame_1 - 0.098 12.1 0.4 0.11 12.0 0.4 1.0 1 0 0 1 1 1 0 Ribonucleotide reductase, small chain C_tripleX PF02363.19 NODE_74053_length_213_cov_1.342697_g66112_i0reverse_frame_1 - 5.4 7.5 10.5 6.7 7.2 1.1 2.7 2 1 0 2 2 2 0 Cysteine rich repeat Nefa_Nip30_N PF10187.9 NODE_74039_length_213_cov_1.348315_g66098_i0reverse_frame_1 - 0.01 16.2 0.4 0.012 15.9 0.4 1.1 1 0 0 1 1 1 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 Cyclin PF08613.11 NODE_74031_length_213_cov_1.376404_g66090_i0forward_frame_1 - 0.11 12.9 0.2 0.12 12.7 0.2 1.1 1 0 0 1 1 1 0 Cyclin RecQ5 PF06959.11 NODE_74020_length_213_cov_1.415730_g66079_i0reverse_frame_1 - 0.21 11.6 1.0 0.22 11.5 1.0 1.1 1 0 0 1 1 1 0 RecQ helicase protein-like 5 (RecQ5) AAA_31 PF13614.6 NODE_74015_length_213_cov_1.443820_g66074_i0forward_frame_1 - 0.076 12.9 0.2 0.094 12.6 0.2 1.1 1 0 0 1 1 1 0 AAA domain FOXP-CC PF16159.5 NODE_74014_length_213_cov_1.449438_g66073_i0reverse_frame_1 - 0.039 14.6 1.1 0.065 13.9 1.1 1.4 1 1 0 1 1 1 0 FOXP coiled-coil domain MatE PF01554.18 NODE_74013_length_213_cov_1.460674_g66072_i0reverse_frame_1 - 1.1e-08 34.9 0.2 1.2e-08 34.8 0.2 1.0 1 0 0 1 1 1 1 MatE OTU PF02338.19 NODE_74009_length_213_cov_1.488764_g66068_i0forward_frame_1 - 2.5e-06 28.0 0.0 2.9e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 OTU-like cysteine protease Tymo_45kd_70kd PF03251.13 NODE_74006_length_213_cov_1.494382_g66065_i0reverse_frame_1 - 0.021 13.8 0.0 0.025 13.6 0.0 1.0 1 0 0 1 1 1 0 Tymovirus 45/70Kd protein DUF1304 PF06993.12 NODE_74005_length_213_cov_1.494382_g66064_i0forward_frame_1 - 0.13 12.3 5.6 0.21 11.6 5.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1304) Chlorophyllase2 PF12740.7 NODE_74003_length_213_cov_1.511236_g66062_i0reverse_frame_1 - 0.15 11.0 0.2 0.15 10.9 0.2 1.0 1 0 0 1 1 1 0 Chlorophyllase enzyme cNMP_binding PF00027.29 NODE_74002_length_213_cov_1.516854_g66061_i0reverse_frame_1 - 6.4e-11 42.2 0.0 7e-11 42.1 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain LBP_BPI_CETP PF01273.25 NODE_74002_length_213_cov_1.516854_g66061_i0reverse_frame_1 - 0.085 12.5 0.0 0.092 12.3 0.0 1.0 1 0 0 1 1 1 0 LBP / BPI / CETP family, N-terminal domain SpoU_sub_bind PF08032.12 NODE_73997_length_213_cov_1.550562_g66056_i0reverse_frame_1 - 0.004 17.4 0.0 0.0049 17.1 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding ZipA_C PF04354.13 NODE_73997_length_213_cov_1.550562_g66056_i0forward_frame_1 - 0.064 13.1 0.0 0.086 12.7 0.0 1.2 1 0 0 1 1 1 0 ZipA, C-terminal FtsZ-binding domain Ank_4 PF13637.6 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 3.8e-08 33.7 0.2 8.6e-05 23.0 0.0 1.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 1.7e-07 31.3 0.1 2.7e-07 30.7 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 4.9e-05 23.8 0.0 5.6e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 9.6e-05 22.5 0.0 0.006 17.0 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 0.0014 19.0 0.0 0.021 15.2 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Npa1 PF11707.8 NODE_73984_length_213_cov_1.578652_g66043_i0reverse_frame_1 - 0.046 13.1 1.1 0.051 12.9 1.1 1.0 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal DOG1 PF14144.6 NODE_73984_length_213_cov_1.578652_g66043_i0reverse_frame_1 - 0.27 11.5 1.3 0.36 11.1 1.3 1.2 1 0 0 1 1 1 0 Seed dormancy control PPP4R2 PF09184.11 NODE_73973_length_213_cov_1.674157_g66032_i0reverse_frame_1 - 0.0016 18.1 0.5 0.0019 17.9 0.5 1.0 1 0 0 1 1 1 1 PPP4R2 Epsilon_antitox PF08998.11 NODE_73971_length_213_cov_1.685393_g66030_i0reverse_frame_1 - 0.041 14.1 0.1 0.049 13.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial epsilon antitoxin McyA_C PF12593.8 NODE_73956_length_213_cov_1.786517_g66015_i0forward_frame_1 - 0.13 12.0 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 Microcystin synthetase C terminal RPAP1_C PF08620.10 NODE_73947_length_213_cov_1.820225_g66006_i0reverse_frame_1 - 0.09 12.9 0.0 0.098 12.8 0.0 1.2 1 0 0 1 1 1 0 RPAP1-like, C-terminal FliM PF02154.15 NODE_73947_length_213_cov_1.820225_g66006_i0reverse_frame_1 - 0.1 12.5 0.1 0.11 12.4 0.1 1.0 1 0 0 1 1 1 0 Flagellar motor switch protein FliM DUF5475 PF17569.2 NODE_73947_length_213_cov_1.820225_g66006_i0forward_frame_1 - 0.013 15.8 0.4 0.015 15.6 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5475) zf-C2H2_4 PF13894.6 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.00045 20.8 0.5 0.00097 19.8 0.5 1.6 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_6 PF13912.6 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.0015 18.4 0.4 0.0022 18.0 0.4 1.2 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.0074 16.7 0.4 0.013 15.9 0.4 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.019 15.3 0.1 0.042 14.2 0.1 1.6 1 1 0 1 1 1 0 Zinc-finger double-stranded RNA-binding Anti-TRAP PF15777.5 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.094 12.7 0.5 0.14 12.2 0.5 1.3 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein SPW PF03779.14 NODE_73943_length_213_cov_1.842697_g66002_i0forward_frame_1 - 0.16 11.5 1.2 0.3 10.7 1.2 1.3 1 0 0 1 1 1 0 SPW repeat NPCC PF08058.11 NODE_73942_length_213_cov_1.842697_g66001_i0reverse_frame_1 - 0.042 13.9 0.4 0.056 13.5 0.2 1.4 1 1 0 1 1 1 0 Nuclear pore complex component zf-C2H2_8 PF15909.5 NODE_73940_length_213_cov_1.882022_g65999_i0reverse_frame_1 - 0.031 14.6 0.5 0.033 14.5 0.5 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon AIG1 PF04548.16 NODE_73925_length_213_cov_2.134831_g65984_i0reverse_frame_1 - 0.0027 17.1 0.1 0.0028 17.0 0.1 1.0 1 0 0 1 1 1 1 AIG1 family Transformer PF06495.11 NODE_73921_length_213_cov_2.185393_g65980_i0reverse_frame_1 - 0.75 9.9 20.4 0.87 9.6 20.4 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein ATG2_CAD PF13329.6 NODE_73920_length_213_cov_2.185393_g65979_i0forward_frame_1 - 0.12 12.1 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Autophagy-related protein 2 CAD motif Fer4_22 PF17179.4 NODE_73919_length_213_cov_2.230337_g65978_i0forward_frame_1 - 0.19 12.6 1.8 0.26 12.1 1.8 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF2779 PF11074.8 NODE_73915_length_213_cov_2.348315_g65974_i0reverse_frame_1 - 0.014 15.9 0.0 0.014 15.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function(DUF2779) DUF2795 PF11387.8 NODE_73909_length_213_cov_2.415730_g65968_i0reverse_frame_1 - 0.077 13.2 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2795) Synaptonemal_3 PF15191.6 NODE_73899_length_213_cov_2.662921_g65958_i0forward_frame_1 - 0.13 12.0 0.9 0.26 11.1 0.9 1.6 1 1 0 1 1 1 0 Synaptonemal complex central element protein 3 Cation_ATPase_C PF00689.21 NODE_73898_length_213_cov_2.674157_g65957_i0forward_frame_1 - 0.012 15.4 0.1 0.012 15.3 0.1 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DNA_methylase PF00145.17 NODE_73882_length_213_cov_3.146067_g65941_i0reverse_frame_1 - 7.6e-07 28.8 0.0 8.1e-07 28.7 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase PfkB PF00294.24 NODE_73873_length_213_cov_3.471910_g65932_i0forward_frame_1 - 0.026 13.8 0.0 0.026 13.8 0.0 1.0 1 0 0 1 1 1 0 pfkB family carbohydrate kinase WIF PF02019.18 NODE_73866_length_213_cov_3.775281_g65925_i0reverse_frame_1 - 0.012 15.3 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 WIF domain DOG1 PF14144.6 NODE_73866_length_213_cov_3.775281_g65925_i0forward_frame_1 - 0.016 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Seed dormancy control cPLA2_C2 PF18695.1 NODE_73866_length_213_cov_3.775281_g65925_i0forward_frame_1 - 0.18 11.8 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Cytosolic phospholipases A2 C2-domain Tobravirus_2B PF05271.11 NODE_73863_length_213_cov_4.151685_g65922_i0forward_frame_1 - 0.021 14.7 0.1 0.025 14.5 0.1 1.0 1 0 0 1 1 1 0 Tobravirus 2B protein Adaptin_binding PF10199.9 NODE_73859_length_213_cov_12.629213_g65918_i0reverse_frame_1 - 0.039 14.6 0.4 0.065 13.9 0.4 1.5 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 HeLo PF14479.6 NODE_73859_length_213_cov_12.629213_g65918_i0reverse_frame_1 - 0.076 12.8 1.9 0.084 12.7 1.9 1.0 1 0 0 1 1 1 0 Prion-inhibition and propagation DUF3709 PF12493.8 NODE_73844_length_213_cov_31.331461_g65903_i0forward_frame_1 - 0.01 15.8 0.3 0.017 15.2 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3709) Orthopox_C10L PF07020.11 NODE_73835_length_213_cov_39.887640_g65894_i0forward_frame_1 - 0.092 13.5 0.3 0.11 13.3 0.3 1.1 1 0 0 1 1 1 0 Orthopoxvirus C10L protein Nod1 PF17114.5 NODE_73827_length_213_cov_47.382022_g65886_i0forward_frame_1 - 0.035 14.2 0.3 0.035 14.2 0.3 1.3 1 1 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 SfLAP PF11139.8 NODE_73826_length_213_cov_48.359551_g65885_i0forward_frame_1 - 0.026 14.0 0.0 0.029 13.8 0.0 1.0 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein zf-SAP30 PF13866.6 NODE_73823_length_213_cov_50.544944_g65882_i0forward_frame_1 - 0.014 15.5 1.4 0.021 15.0 1.4 1.5 1 1 0 1 1 1 0 SAP30 zinc-finger DUF3043 PF11241.8 NODE_73816_length_213_cov_54.938202_g65875_i0reverse_frame_1 - 7 6.7 5.0 8 6.5 5.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) LHH PF14411.6 NODE_73816_length_213_cov_54.938202_g65875_i0forward_frame_1 - 0.72 10.1 5.0 0.17 12.1 1.7 1.6 2 0 0 2 2 2 0 A nuclease of the HNH/ENDO VII superfamily with conserved LHH Vps16_C PF04840.12 NODE_73815_length_213_cov_57.039326_g65874_i0forward_frame_1 - 0.041 12.9 0.3 0.044 12.8 0.3 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region Toxin_5 PF05294.13 NODE_73805_length_213_cov_75.747191_g65864_i0forward_frame_1 - 0.036 14.5 1.3 0.052 14.0 1.3 1.3 1 0 0 1 1 1 0 Scorpion short toxin Peptidase_C32 PF05411.12 NODE_73802_length_213_cov_85.151685_g65861_i0reverse_frame_1 - 0.034 14.0 0.0 0.066 13.1 0.0 1.3 1 1 0 1 1 1 0 Equine arteritis virus putative proteinase Prot_inhib_II PF02428.15 NODE_73798_length_213_cov_153.511236_g65857_i0reverse_frame_1 - 0.046 14.2 0.5 0.046 14.2 0.5 1.9 2 0 0 2 2 2 0 Potato type II proteinase inhibitor family TMEM100 PF16311.5 NODE_73789_length_213_cov_298.078652_g65848_i0forward_frame_1 - 0.044 13.4 0.0 0.044 13.4 0.0 1.9 1 1 1 2 2 2 0 Transmembrane protein 100 DUF4417 PF14386.6 NODE_73777_length_214_cov_0.893855_g65836_i0forward_frame_2 - 0.13 11.8 0.1 0.15 11.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4417) TUSC2 PF15000.6 NODE_73774_length_214_cov_0.893855_g65833_i0reverse_frame_3 - 0.047 14.0 0.1 0.052 13.8 0.1 1.1 1 0 0 1 1 1 0 Tumour suppressor candidate 2 Mid2 PF04478.12 NODE_73774_length_214_cov_0.893855_g65833_i0reverse_frame_3 - 0.062 13.1 0.0 0.07 13.0 0.0 1.0 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor SSXRD PF09514.10 NODE_73774_length_214_cov_0.893855_g65833_i0reverse_frame_3 - 0.11 12.1 1.7 0.16 11.6 0.3 1.9 2 0 0 2 2 2 0 SSXRD motif SWIM PF04434.17 NODE_73771_length_214_cov_0.893855_g65830_i0reverse_frame_3 - 3.5 7.4 10.8 4.1 7.2 0.6 2.4 1 1 1 2 2 2 0 SWIM zinc finger DUF3587 PF12132.8 NODE_73771_length_214_cov_0.893855_g65830_i0reverse_frame_3 - 6.6 6.1 7.8 18 4.7 7.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3587) Macscav_rec PF03523.13 NODE_73770_length_214_cov_0.893855_g65829_i0reverse_frame_2 - 0.022 14.6 0.3 0.034 14.0 0.3 1.3 1 0 0 1 1 1 0 Macrophage scavenger receptor IBV_3C PF03620.13 NODE_73770_length_214_cov_0.893855_g65829_i0reverse_frame_2 - 0.095 13.2 0.9 0.11 13.0 0.9 1.1 1 0 0 1 1 1 0 IBV 3C protein Sigma70_r1_1 PF03979.14 NODE_73764_length_214_cov_0.893855_g65823_i0reverse_frame_3 - 0.049 13.7 3.8 0.053 13.6 3.8 1.2 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 DUF4668 PF15701.5 NODE_73761_length_214_cov_0.893855_g65820_i0reverse_frame_2 - 0.12 12.2 0.6 0.13 12.1 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) DUF5539 PF17693.1 NODE_73759_length_214_cov_0.893855_g65818_i0forward_frame_2 - 0.048 13.3 0.0 0.057 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5539) MerE PF05052.12 NODE_73758_length_214_cov_0.972067_g65817_i0forward_frame_3 - 0.081 12.9 1.2 0.11 12.5 1.2 1.1 1 0 0 1 1 1 0 MerE protein PHP PF02811.19 NODE_73753_length_214_cov_1.005587_g65812_i0reverse_frame_3 - 0.13 12.6 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 PHP domain DNA_methylase PF00145.17 NODE_73753_length_214_cov_1.005587_g65812_i0forward_frame_3 - 4.7e-07 29.5 0.1 5.4e-07 29.3 0.1 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase HPPK PF01288.20 NODE_73746_length_214_cov_1.027933_g65805_i0reverse_frame_3 - 0.079 13.5 0.0 0.083 13.4 0.0 1.1 1 0 0 1 1 1 0 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ChapFlgA_N PF17656.1 NODE_73744_length_214_cov_1.033520_g65803_i0forward_frame_2 - 0.16 12.2 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 FlgA N-terminal domain FAM27 PF15832.5 NODE_73734_length_214_cov_1.117318_g65793_i0reverse_frame_3 - 2.7 8.6 14.4 13 6.4 14.4 1.9 1 1 0 1 1 1 0 FAM27 D and E protein family FAM27 PF15832.5 NODE_73734_length_214_cov_1.117318_g65793_i0reverse_frame_2 - 0.13 12.8 5.4 0.16 12.6 5.4 1.3 1 1 0 1 1 1 0 FAM27 D and E protein family DUF4567 PF15131.6 NODE_73734_length_214_cov_1.117318_g65793_i0forward_frame_2 - 0.054 13.5 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4567) DUF4022 PF13214.6 NODE_73732_length_214_cov_1.117318_g65791_i0reverse_frame_3 - 0.089 13.1 0.4 0.089 13.1 0.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4022) DUF2537 PF10801.8 NODE_73731_length_214_cov_1.117318_g65790_i0forward_frame_2 - 0.65 10.3 2.6 0.76 10.0 2.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2537) Ustilago_mating PF05722.12 NODE_73728_length_214_cov_1.195531_g65787_i0reverse_frame_3 - 3.9 6.9 7.5 4 6.9 7.5 1.1 1 0 0 1 1 1 0 Ustilago B locus mating-type protein MFS_1 PF07690.16 NODE_73725_length_214_cov_1.229050_g65784_i0reverse_frame_3 - 0.0061 15.5 1.8 0.0072 15.3 1.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_73725_length_214_cov_1.229050_g65784_i0reverse_frame_3 - 0.013 14.4 0.4 0.014 14.3 0.4 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter IRK PF01007.20 NODE_73725_length_214_cov_1.229050_g65784_i0reverse_frame_2 - 2.9 7.7 7.0 3.3 7.5 6.7 1.3 1 1 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain HAP2-GCS1 PF10699.9 NODE_73723_length_214_cov_1.245810_g65782_i0forward_frame_2 - 1.2e-05 25.1 0.0 1.7e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Male gamete fusion factor DUF4007 PF13182.6 NODE_73723_length_214_cov_1.245810_g65782_i0forward_frame_2 - 0.067 12.3 0.0 0.069 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4007) WD40 PF00400.32 NODE_73718_length_214_cov_1.284916_g65777_i0reverse_frame_3 - 0.00027 21.7 0.0 0.038 14.9 0.0 2.3 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF3915 PF13054.6 NODE_73715_length_214_cov_1.296089_g65774_i0reverse_frame_3 - 0.07 13.1 0.5 0.074 13.0 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_73715_length_214_cov_1.296089_g65774_i0reverse_frame_3 - 2.1 6.5 5.7 2.4 6.3 5.7 1.0 1 0 0 1 1 1 0 Atrophin-1 family MraZ PF02381.18 NODE_73714_length_214_cov_1.301676_g65773_i0forward_frame_3 - 0.065 13.2 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks344.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks344.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks344.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks344.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:22:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3413 PF11893.8 NODE_73708_length_214_cov_1.335196_g65767_i0forward_frame_2 - 5.8 6.0 11.8 6.4 5.9 11.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) zf-CCCH PF00642.24 NODE_73701_length_214_cov_1.340782_g65760_i0forward_frame_3 - 0.001 18.9 1.6 0.0014 18.5 1.6 1.2 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_73701_length_214_cov_1.340782_g65760_i0forward_frame_3 - 0.0014 18.6 4.8 0.0023 17.9 4.8 1.4 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_73701_length_214_cov_1.340782_g65760_i0forward_frame_3 - 0.02 15.6 0.1 0.021 15.5 0.1 1.1 1 0 0 1 1 1 0 Torus domain zf-CCCH_4 PF18044.1 NODE_73701_length_214_cov_1.340782_g65760_i0forward_frame_3 - 0.039 13.8 1.3 0.061 13.1 1.3 1.4 1 0 0 1 1 1 0 CCCH-type zinc finger ACC_epsilon PF13822.6 NODE_73698_length_214_cov_1.340782_g65757_i0reverse_frame_2 - 0.029 15.1 2.6 0.038 14.7 2.6 1.2 1 0 0 1 1 1 0 Acyl-CoA carboxylase epsilon subunit Cas9_C PF18525.1 NODE_73697_length_214_cov_1.340782_g65756_i0forward_frame_3 - 0.031 14.5 0.0 0.033 14.4 0.0 1.0 1 0 0 1 1 1 0 Cas9 C-terminal domain FANCM-MHF_bd PF16783.5 NODE_73696_length_214_cov_1.340782_g65755_i0forward_frame_3 - 0.019 15.1 1.3 0.021 14.9 1.3 1.1 1 0 0 1 1 1 0 FANCM to MHF binding domain DUF2476 PF10630.9 NODE_73694_length_214_cov_1.351955_g65753_i0forward_frame_3 - 7.3 6.6 10.3 9.9 6.2 10.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2476) DUF1933 PF09147.10 NODE_73693_length_214_cov_1.351955_g65752_i0forward_frame_2 - 0.023 14.3 0.0 0.027 14.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1933) ComZ PF10815.8 NODE_73691_length_214_cov_1.368715_g65750_i0forward_frame_2 - 0.024 14.6 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 ComZ ATP-cone PF03477.16 NODE_73690_length_214_cov_1.385475_g65749_i0reverse_frame_3 - 0.00082 19.9 0.0 0.0012 19.4 0.0 1.2 1 0 0 1 1 1 1 ATP cone domain DUF4732 PF15876.5 NODE_73688_length_214_cov_1.430168_g65747_i0forward_frame_3 - 0.2 11.7 1.2 0.23 11.5 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4732) DUF3209 PF11483.8 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_2 - 0.015 15.7 0.1 0.016 15.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3209) HSA PF07529.13 NODE_73686_length_214_cov_1.435754_g65745_i0reverse_frame_2 - 0.0099 16.2 2.3 0.011 16.0 2.3 1.1 1 0 0 1 1 1 1 HSA Arm PF00514.23 NODE_73685_length_214_cov_1.435754_g65744_i0reverse_frame_3 - 0.089 12.9 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Armadillo/beta-catenin-like repeat FERM_C PF09380.10 NODE_73685_length_214_cov_1.435754_g65744_i0reverse_frame_2 - 0.031 14.6 0.1 0.036 14.5 0.1 1.2 1 0 0 1 1 1 0 FERM C-terminal PH-like domain DUF2106 PF09879.9 NODE_73684_length_214_cov_1.452514_g65743_i0reverse_frame_2 - 0.12 11.9 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2106) zf-TRM13_CCCH PF11722.8 NODE_73681_length_214_cov_1.469274_g65740_i0reverse_frame_3 - 0.21 11.4 4.2 0.19 11.5 1.4 2.0 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein partial_CstF PF15861.5 NODE_73681_length_214_cov_1.469274_g65740_i0reverse_frame_2 - 0.01 15.6 0.1 0.015 15.0 0.1 1.3 1 0 0 1 1 1 1 Partial cleavage stimulation factor domain DUF3236 PF11576.8 NODE_73680_length_214_cov_1.469274_g65739_i0forward_frame_3 - 0.14 11.9 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3236) NSP10 PF09401.10 NODE_73675_length_214_cov_1.497207_g65734_i0forward_frame_2 - 0.0084 16.2 0.1 0.011 15.8 0.1 1.2 1 0 0 1 1 1 1 RNA synthesis protein NSP10 HisKA PF00512.25 NODE_73674_length_214_cov_1.508380_g65733_i0forward_frame_2 - 6.2e-11 42.2 0.2 6.6e-11 42.1 0.2 1.0 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain FdsD PF11390.8 NODE_73673_length_214_cov_1.513966_g65732_i0forward_frame_3 - 0.026 14.8 0.0 0.027 14.8 0.0 1.2 1 0 0 1 1 1 0 NADH-dependant formate dehydrogenase delta subunit FdsD DUF1722 PF08349.11 NODE_73662_length_214_cov_1.575419_g65721_i0reverse_frame_3 - 0.0022 18.2 0.3 0.0023 18.2 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) Turandot PF07240.11 NODE_73662_length_214_cov_1.575419_g65721_i0reverse_frame_3 - 0.041 13.9 1.1 0.057 13.4 1.0 1.4 1 1 0 1 1 1 0 Stress-inducible humoral factor Turandot Dimer_Tnp_hAT PF05699.14 NODE_73662_length_214_cov_1.575419_g65721_i0reverse_frame_3 - 0.13 12.1 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region Dna2 PF08696.11 NODE_73659_length_214_cov_1.603352_g65718_i0reverse_frame_3 - 0.074 12.8 0.0 0.074 12.8 0.0 1.1 1 0 0 1 1 1 0 DNA replication factor Dna2 RNA_pol_Rpb2_1 PF04563.15 NODE_73657_length_214_cov_1.608939_g65716_i0reverse_frame_3 - 0.066 12.7 0.1 0.096 12.2 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase beta subunit U62_UL91 PF17442.2 NODE_73657_length_214_cov_1.608939_g65716_i0reverse_frame_3 - 0.087 12.8 0.3 0.22 11.5 0.2 1.7 1 1 1 2 2 2 0 Functional domain of U62 and UL91 proteins RE_MjaI PF09568.10 NODE_73657_length_214_cov_1.608939_g65716_i0reverse_frame_2 - 0.078 12.8 0.0 0.096 12.5 0.0 1.1 1 0 0 1 1 1 0 MjaI restriction endonuclease DUF4215 PF13948.6 NODE_73651_length_214_cov_1.675978_g65710_i0reverse_frame_3 - 2.9e-12 46.8 26.6 3.4e-08 33.8 12.6 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4215) Peptidase_M74 PF03411.13 NODE_73648_length_214_cov_1.709497_g65707_i0reverse_frame_2 - 0.0002 21.0 0.0 0.00027 20.6 0.0 1.2 1 0 0 1 1 1 1 Penicillin-insensitive murein endopeptidase T5orf172 PF10544.9 NODE_73646_length_214_cov_1.720670_g65705_i0forward_frame_3 - 0.059 13.9 0.1 0.067 13.7 0.1 1.1 1 0 0 1 1 1 0 T5orf172 domain NTP_transferase PF00483.23 NODE_73645_length_214_cov_1.731844_g65704_i0reverse_frame_2 - 1.3e-07 31.4 0.0 1.5e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase FOXP-CC PF16159.5 NODE_73643_length_214_cov_1.754190_g65702_i0forward_frame_3 - 0.11 13.1 0.9 0.15 12.8 0.9 1.2 1 0 0 1 1 1 0 FOXP coiled-coil domain Ribosomal_L14e PF01929.17 NODE_73642_length_214_cov_1.759777_g65701_i0reverse_frame_2 - 0.028 14.9 0.3 0.039 14.5 0.3 1.2 1 0 0 1 1 1 0 Ribosomal protein L14 CPP1-like PF11833.8 NODE_73642_length_214_cov_1.759777_g65701_i0reverse_frame_2 - 1.4 8.5 4.8 1.7 8.3 4.8 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like LPP PF04728.13 NODE_73640_length_214_cov_1.776536_g65699_i0forward_frame_3 - 0.013 15.9 0.2 0.021 15.2 0.2 1.4 1 0 0 1 1 1 0 Lipoprotein leucine-zipper HMMR_C PF15908.5 NODE_73640_length_214_cov_1.776536_g65699_i0forward_frame_3 - 0.034 14.4 0.5 0.087 13.1 0.5 1.6 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal CxxCxxCC PF03692.15 NODE_73637_length_214_cov_1.787709_g65696_i0reverse_frame_3 - 0.0022 18.6 0.1 0.0025 18.5 0.1 1.2 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain Pkinase PF00069.25 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 3.2e-18 66.1 0.2 3.5e-18 65.9 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 1.6e-08 34.1 0.0 1.8e-08 34.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 1.5e-05 25.1 0.0 1.5e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 4.3e-05 23.2 0.3 5.3e-05 22.9 0.3 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase Kdo PF06293.14 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 0.00033 20.1 0.1 0.00035 20.0 0.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 0.044 13.4 0.0 0.046 13.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 0.1 11.4 0.0 0.1 11.4 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase DUF1679 PF07914.11 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 0.11 11.4 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) Noelin-1 PF12308.8 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 0.033 14.2 1.6 0.042 13.8 0.8 1.5 1 1 0 1 1 1 0 Neurogenesis glycoprotein NRBF2 PF08961.10 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 0.18 11.4 6.5 0.2 11.2 6.5 1.2 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator DUF3015 PF11220.8 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 0.23 11.3 3.7 0.28 11.1 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3015) dCache_2 PF08269.11 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 4.4 6.4 11.6 4.5 6.4 11.6 1.0 1 0 0 1 1 1 0 Cache domain DUF4407 PF14362.6 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 6.9 5.9 10.2 7.9 5.7 10.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-HIT PF04438.16 NODE_73634_length_214_cov_1.804469_g65693_i0forward_frame_3 - 0.046 13.6 2.8 0.046 13.6 2.8 1.7 2 0 0 2 2 2 0 HIT zinc finger PEGSRP PF07623.11 NODE_73627_length_214_cov_1.882682_g65686_i0forward_frame_3 - 0.2 11.5 0.2 0.2 11.5 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) MTA_R1 PF17226.2 NODE_73627_length_214_cov_1.882682_g65686_i0forward_frame_2 - 0.029 14.5 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 MTA R1 domain DUF3447 PF11929.8 NODE_73625_length_214_cov_1.905028_g65684_i0forward_frame_2 - 0.19 11.7 2.3 0.35 10.9 0.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3447) DUF4183 PF13799.6 NODE_73623_length_214_cov_1.932961_g65682_i0forward_frame_3 - 0.18 11.6 1.1 0.23 11.3 0.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4183) MPS-4 PF17523.2 NODE_73622_length_214_cov_1.955307_g65681_i0reverse_frame_3 - 0.048 13.8 0.5 0.057 13.6 0.5 1.2 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 MCU PF04678.13 NODE_73622_length_214_cov_1.955307_g65681_i0reverse_frame_3 - 0.21 11.7 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter DUF1155 PF06633.11 NODE_73619_length_214_cov_1.983240_g65678_i0forward_frame_3 - 0.039 13.5 0.4 0.09 12.3 0.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1155) Sarcolipin PF05366.11 NODE_73617_length_214_cov_2.033520_g65676_i0reverse_frame_2 - 0.99 9.2 3.3 1.1 9.0 1.3 2.0 2 0 0 2 2 2 0 Sarcolipin PTS_2-RNA PF01885.16 NODE_73614_length_214_cov_2.100559_g65673_i0reverse_frame_2 - 1e-05 25.6 0.0 1.1e-05 25.6 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family OST-HTH PF12872.7 NODE_73614_length_214_cov_2.100559_g65673_i0reverse_frame_2 - 0.14 12.0 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 OST-HTH/LOTUS domain Shikimate_DH PF01488.20 NODE_73613_length_214_cov_2.111732_g65672_i0reverse_frame_2 - 0.14 12.2 0.1 0.15 12.1 0.1 1.0 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF2721 PF11026.8 NODE_73613_length_214_cov_2.111732_g65672_i0forward_frame_3 - 0.071 13.0 2.4 0.079 12.8 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) DUF3270 PF11674.8 NODE_73613_length_214_cov_2.111732_g65672_i0forward_frame_3 - 0.084 13.1 6.5 0.09 13.0 6.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) YdjM PF04307.14 NODE_73607_length_214_cov_2.206704_g65666_i0reverse_frame_3 - 0.062 12.6 0.3 0.067 12.5 0.3 1.1 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase VGLL4 PF15245.6 NODE_73607_length_214_cov_2.206704_g65666_i0forward_frame_3 - 0.1 12.7 0.7 0.14 12.2 0.7 1.1 1 0 0 1 1 1 0 Transcription cofactor vestigial-like protein 4 7TM_GPCR_Srbc PF10316.9 NODE_73607_length_214_cov_2.206704_g65666_i0forward_frame_3 - 0.41 10.1 6.3 0.49 9.9 6.3 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srbc Transglut_prok PF09017.10 NODE_73605_length_214_cov_2.268156_g65664_i0reverse_frame_2 - 0.21 10.9 0.4 0.23 10.8 0.4 1.0 1 0 0 1 1 1 0 Microbial transglutaminase PglL_A PF15864.5 NODE_73604_length_214_cov_2.268156_g65663_i0forward_frame_3 - 0.037 13.8 0.3 0.059 13.1 0.3 1.3 1 0 0 1 1 1 0 Protein glycosylation ligase DUF4131 PF13567.6 NODE_73595_length_214_cov_2.502793_g65654_i0reverse_frame_3 - 0.016 14.9 2.0 0.017 14.8 2.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Wzy_C PF04932.15 NODE_73595_length_214_cov_2.502793_g65654_i0reverse_frame_3 - 0.076 12.6 2.1 0.082 12.5 2.1 1.1 1 0 0 1 1 1 0 O-Antigen ligase Prominin PF05478.11 NODE_73595_length_214_cov_2.502793_g65654_i0reverse_frame_3 - 0.62 8.0 2.0 0.68 7.8 2.0 1.1 1 0 0 1 1 1 0 Prominin Syndecan PF01034.20 NODE_73595_length_214_cov_2.502793_g65654_i0reverse_frame_3 - 5 7.1 5.1 1.1 9.2 0.2 2.0 2 0 0 2 2 2 0 Syndecan domain Epiglycanin_C PF14654.6 NODE_73594_length_214_cov_2.519553_g65653_i0forward_frame_3 - 0.029 14.4 0.0 0.033 14.2 0.0 1.1 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region DUF4500 PF14937.6 NODE_73593_length_214_cov_2.541899_g65652_i0forward_frame_2 - 0.064 13.3 0.2 0.071 13.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4500) RAMP4 PF06624.12 NODE_73592_length_214_cov_2.547486_g65651_i0forward_frame_2 - 6.1 7.0 5.7 2.3 8.4 0.8 2.0 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 DUF1547 PF07577.11 NODE_73587_length_214_cov_2.703911_g65646_i0reverse_frame_2 - 0.062 13.7 0.1 0.079 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1547) CBP_BcsN PF17038.5 NODE_73586_length_214_cov_2.726257_g65645_i0reverse_frame_2 - 0.0016 17.8 0.1 0.0017 17.8 0.1 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsN MFS_1 PF07690.16 NODE_73584_length_214_cov_2.770950_g65643_i0forward_frame_2 - 6.6e-09 35.1 2.0 7.5e-09 35.0 2.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ATP_transf PF09830.9 NODE_73580_length_214_cov_2.977654_g65639_i0reverse_frame_3 - 0.17 12.0 0.2 0.23 11.6 0.2 1.5 1 1 0 1 1 1 0 ATP adenylyltransferase DUF4316 PF14195.6 NODE_73578_length_214_cov_3.111732_g65637_i0reverse_frame_3 - 0.13 12.0 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4316) NDUF_B7 PF05676.13 NODE_73578_length_214_cov_3.111732_g65637_i0reverse_frame_2 - 0.078 12.7 0.1 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Sulfotransfer_1 PF00685.27 NODE_73578_length_214_cov_3.111732_g65637_i0forward_frame_3 - 0.00021 20.9 0.2 0.00022 20.8 0.2 1.0 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 NODE_73578_length_214_cov_3.111732_g65637_i0forward_frame_3 - 0.014 15.8 0.0 0.014 15.8 0.0 1.0 1 0 0 1 1 1 0 Sulfotransferase family Ldh_1_N PF00056.23 NODE_73578_length_214_cov_3.111732_g65637_i0forward_frame_3 - 0.09 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain PM0188 PF11477.8 NODE_73576_length_214_cov_3.189944_g65635_i0forward_frame_3 - 0.088 12.0 0.0 0.088 12.0 0.0 1.0 1 0 0 1 1 1 0 Sialyltransferase PMO188 NDUF_B4 PF07225.12 NODE_73576_length_214_cov_3.189944_g65635_i0forward_frame_2 - 0.055 13.4 0.0 0.065 13.1 0.0 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) Kinesin PF00225.23 NODE_73571_length_214_cov_3.335196_g65630_i0forward_frame_3 - 4.5e-06 25.8 0.0 4.7e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_73571_length_214_cov_3.335196_g65630_i0forward_frame_3 - 0.0027 17.7 0.1 0.0046 16.9 0.0 1.3 1 1 0 1 1 1 1 Microtubule binding Kinesin PF00225.23 NODE_73571_length_214_cov_3.335196_g65630_i0forward_frame_2 - 0.0011 18.0 0.2 0.0013 17.7 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_73571_length_214_cov_3.335196_g65630_i0forward_frame_2 - 0.016 15.1 0.2 0.019 14.9 0.2 1.1 1 0 0 1 1 1 0 Microtubule binding Ion_trans PF00520.31 NODE_73569_length_214_cov_3.553073_g65628_i0forward_frame_3 - 0.013 14.7 0.1 0.019 14.2 0.1 1.3 1 0 0 1 1 1 0 Ion transport protein DUF2718 PF10918.8 NODE_73566_length_214_cov_3.726257_g65625_i0reverse_frame_3 - 0.11 13.0 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2718) Ntox16 PF15523.6 NODE_73563_length_214_cov_4.636872_g65622_i0reverse_frame_2 - 0.019 15.2 4.5 0.022 15.0 4.5 1.1 1 0 0 1 1 1 0 Novel toxin 16 REV PF00424.18 NODE_73559_length_214_cov_15.497207_g65618_i0reverse_frame_3 - 0.015 15.3 0.1 0.017 15.1 0.1 1.1 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) Metallopep PF12044.8 NODE_73559_length_214_cov_15.497207_g65618_i0forward_frame_2 - 0.0021 16.7 0.7 0.0024 16.6 0.7 1.1 1 0 0 1 1 1 1 Putative peptidase family EAP30 PF04157.16 NODE_73556_length_214_cov_22.586592_g65615_i0forward_frame_3 - 0.19 11.0 0.0 0.19 11.0 0.0 1.0 1 0 0 1 1 1 0 EAP30/Vps36 family Papilloma_E5A PF05776.12 NODE_73555_length_214_cov_26.022346_g65614_i0forward_frame_2 - 0.17 12.3 11.2 0.2 12.0 11.2 1.2 1 0 0 1 1 1 0 Papillomavirus E5A protein DUF2070 PF09843.9 NODE_73555_length_214_cov_26.022346_g65614_i0forward_frame_2 - 6.7 4.9 11.4 6.8 4.9 11.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) GMAP PF06540.11 NODE_73554_length_214_cov_30.642458_g65613_i0reverse_frame_3 - 0.17 11.9 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Galanin message associated peptide (GMAP) Baculo_p48 PF04878.13 NODE_73552_length_214_cov_33.050279_g65611_i0reverse_frame_3 - 0.02 13.8 0.4 0.024 13.6 0.4 1.1 1 0 0 1 1 1 0 Baculovirus P48 protein DUF932 PF06067.11 NODE_73549_length_214_cov_36.430168_g65608_i0forward_frame_3 - 0.088 12.6 0.5 0.088 12.6 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF932) VWC PF00093.18 NODE_73548_length_214_cov_37.748603_g65607_i0reverse_frame_3 - 0.14 12.5 6.4 0.25 11.7 6.4 1.6 1 1 0 1 1 1 0 von Willebrand factor type C domain DUF1660 PF07874.11 NODE_73546_length_214_cov_42.648045_g65605_i0reverse_frame_3 - 0.59 10.7 4.1 0.75 10.3 4.1 1.3 1 1 0 1 1 1 0 Prophage protein (DUF1660) Antistasin PF02822.14 NODE_73541_length_214_cov_46.039106_g65600_i0reverse_frame_2 - 0.038 14.6 1.1 0.043 14.5 0.1 1.6 2 0 0 2 2 2 0 Antistasin family FA_hydroxylase PF04116.13 NODE_73537_length_214_cov_50.575419_g65596_i0reverse_frame_3 - 0.0091 16.3 0.2 0.0093 16.3 0.2 1.1 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily MAS20 PF02064.15 NODE_73535_length_214_cov_51.955307_g65594_i0reverse_frame_3 - 4.2 7.5 15.4 0.77 9.9 11.5 1.7 1 1 1 2 2 2 0 MAS20 protein import receptor DUF1290 PF06947.12 NODE_73535_length_214_cov_51.955307_g65594_i0forward_frame_3 - 0.18 11.9 4.3 0.23 11.6 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1290) Dpy19 PF10034.9 NODE_73534_length_214_cov_51.988827_g65593_i0forward_frame_2 - 0.087 11.0 1.3 0.081 11.1 1.3 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation Dimer_Tnp_hAT PF05699.14 NODE_73532_length_214_cov_57.513966_g65591_i0reverse_frame_3 - 0.036 13.9 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region DUF974 PF06159.13 NODE_73528_length_214_cov_60.737430_g65587_i0forward_frame_3 - 0.21 11.4 0.0 0.22 11.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF974) RNA_polI_A34 PF08208.11 NODE_73525_length_214_cov_66.039106_g65584_i0reverse_frame_2 - 0.051 13.7 13.4 0.052 13.6 13.4 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 EIIBC-GUT_N PF03612.14 NODE_73525_length_214_cov_66.039106_g65584_i0reverse_frame_2 - 1 9.1 5.6 1.1 9.0 5.6 1.0 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Coilin_N PF15862.5 NODE_73525_length_214_cov_66.039106_g65584_i0reverse_frame_2 - 1.5 8.6 14.8 1.7 8.5 14.8 1.1 1 0 0 1 1 1 0 Coilin N-terminus Peptidase_S49_N PF08496.10 NODE_73525_length_214_cov_66.039106_g65584_i0reverse_frame_2 - 3.2 7.8 10.8 3.8 7.6 10.8 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Presenilin PF01080.17 NODE_73525_length_214_cov_66.039106_g65584_i0reverse_frame_2 - 8.6 5.0 5.2 8.2 5.1 5.2 1.0 1 0 0 1 1 1 0 Presenilin DUF3488 PF11992.8 NODE_73525_length_214_cov_66.039106_g65584_i0forward_frame_2 - 0.34 9.8 3.2 0.35 9.8 3.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF3402 PF11882.8 NODE_73524_length_214_cov_66.262570_g65583_i0reverse_frame_3 - 0.59 9.2 1.7 9.3 5.2 0.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3402) Sigma70_r4 PF04545.16 NODE_73523_length_214_cov_66.631285_g65582_i0reverse_frame_3 - 0.051 13.1 0.2 0.073 12.6 0.2 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 UPF0183 PF03676.14 NODE_73522_length_214_cov_66.692737_g65581_i0reverse_frame_3 - 0.14 11.4 0.9 0.15 11.3 0.9 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0183) WD40 PF00400.32 NODE_73520_length_214_cov_72.754190_g65579_i0forward_frame_2 - 0.019 15.8 0.3 0.037 14.9 0.1 1.6 1 1 0 1 1 1 0 WD domain, G-beta repeat PALB2_WD40 PF16756.5 NODE_73520_length_214_cov_72.754190_g65579_i0forward_frame_2 - 0.044 12.7 0.0 0.052 12.5 0.0 1.0 1 0 0 1 1 1 0 Partner and localizer of BRCA2 WD40 domain Antibiotic_NAT PF02522.14 NODE_73519_length_214_cov_73.776536_g65578_i0reverse_frame_3 - 0.088 12.6 0.1 0.1 12.4 0.1 1.0 1 0 0 1 1 1 0 Aminoglycoside 3-N-acetyltransferase E7R PF17467.2 NODE_73517_length_214_cov_86.234637_g65576_i0reverse_frame_2 - 0.049 13.8 0.1 0.066 13.4 0.1 1.1 1 0 0 1 1 1 0 Viral Protein E7 Tox-MPTase5 PF15641.6 NODE_73515_length_214_cov_91.726257_g65574_i0reverse_frame_3 - 0.14 12.2 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 Metallopeptidase toxin 5 SID-1_RNA_chan PF13965.6 NODE_73515_length_214_cov_91.726257_g65574_i0reverse_frame_2 - 0.2 10.0 3.5 0.23 9.8 3.5 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 XRCC4 PF06632.12 NODE_73512_length_214_cov_113.391061_g65571_i0forward_frame_2 - 0.19 10.5 0.0 0.22 10.3 0.0 1.0 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 MerR PF00376.23 NODE_73507_length_214_cov_142.597765_g65566_i0reverse_frame_2 - 0.029 14.1 0.1 0.13 12.0 0.0 1.9 2 0 0 2 2 2 0 MerR family regulatory protein RNA_pol_Rpb8 PF03870.15 NODE_73506_length_214_cov_171.189944_g65565_i0reverse_frame_2 - 0.00094 19.4 0.3 0.001 19.3 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb8 EBV-NA1 PF02905.14 NODE_73501_length_214_cov_253.899441_g65560_i0reverse_frame_2 - 0.11 12.3 0.1 0.23 11.3 0.1 1.5 1 1 1 2 2 2 0 Epstein Barr virus nuclear antigen-1, DNA-binding domain DUF3915 PF13054.6 NODE_73490_length_215_cov_0.883333_g65549_i0forward_frame_3 - 0.014 15.4 1.3 0.016 15.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_73490_length_215_cov_0.883333_g65549_i0forward_frame_3 - 0.75 8.0 4.0 0.81 7.9 4.0 1.0 1 0 0 1 1 1 0 Atrophin-1 family Myticin-prepro PF10690.9 NODE_73490_length_215_cov_0.883333_g65549_i0forward_frame_2 - 0.059 13.6 0.5 0.091 13.0 0.3 1.4 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel Glyc_hyd_38C_2 PF18230.1 NODE_73490_length_215_cov_0.883333_g65549_i0forward_frame_2 - 0.07 13.2 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal sub-domain DUF640 PF04852.12 NODE_73486_length_215_cov_0.883333_g65545_i0forward_frame_3 - 0.054 13.7 0.0 0.055 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF640) RAG2_PHD PF13341.6 NODE_73484_length_215_cov_0.883333_g65543_i0forward_frame_2 - 0.05 13.6 0.0 0.057 13.5 0.0 1.2 1 0 0 1 1 1 0 RAG2 PHD domain Spt46 PF17734.1 NODE_73483_length_215_cov_0.888889_g65542_i0forward_frame_3 - 0.037 13.8 0.2 0.038 13.8 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 Glyco_hydro_3_C PF01915.22 NODE_73482_length_215_cov_0.888889_g65541_i0forward_frame_3 - 2.2e-08 34.3 0.0 2.2e-08 34.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain PhaC_N PF07167.13 NODE_73480_length_215_cov_0.888889_g65539_i0reverse_frame_3 - 0.16 11.6 1.6 0.2 11.3 1.6 1.1 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GATA PF00320.27 NODE_73474_length_215_cov_0.888889_g65533_i0reverse_frame_3 - 0.22 11.2 3.8 0.13 11.8 1.7 1.7 1 1 1 2 2 2 0 GATA zinc finger UL11 PF11094.8 NODE_73474_length_215_cov_0.888889_g65533_i0forward_frame_3 - 0.18 11.7 0.8 0.34 10.8 0.8 1.5 1 0 0 1 1 1 0 Membrane-associated tegument protein GCHY-1 PF02649.14 NODE_73474_length_215_cov_0.888889_g65533_i0forward_frame_2 - 0.16 11.5 0.7 0.17 11.3 0.7 1.0 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 DUF5527 PF17665.1 NODE_73465_length_215_cov_1.011111_g65524_i0forward_frame_2 - 0.035 13.6 0.8 0.039 13.5 0.8 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5527) zf-C2H2_11 PF16622.5 NODE_73464_length_215_cov_1.016667_g65523_i0reverse_frame_3 - 1.6 8.5 5.2 1.9 8.3 1.2 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type N36 PF11438.8 NODE_73462_length_215_cov_1.027778_g65521_i0forward_frame_3 - 0.12 12.2 0.1 0.59 10.0 0.0 1.9 1 1 1 2 2 2 0 36-mer N-terminal peptide of the N protein (N36) HCV_NS1 PF01560.17 NODE_73457_length_215_cov_1.055556_g65516_i0forward_frame_3 - 0.15 10.7 2.9 0.17 10.6 2.9 1.0 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein E2/NS1 Pkinase PF00069.25 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 1.6e-16 60.5 0.9 1.7e-16 60.4 0.9 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 4.1e-10 39.4 0.1 4.3e-10 39.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 1.2e-05 24.8 0.0 1.2e-05 24.8 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.0023 16.8 0.2 0.0023 16.8 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.0087 15.2 0.1 0.0096 15.0 0.1 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pox_ser-thr_kin PF05445.11 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.018 14.0 0.2 0.018 14.0 0.2 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Haspin_kinase PF12330.8 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.028 13.4 0.2 0.03 13.3 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.028 14.3 0.1 0.028 14.3 0.1 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF2642 PF10842.8 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.18 11.7 0.8 3.4 7.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2642) TSP_NTD PF17804.1 NODE_73456_length_215_cov_1.061111_g65515_i0forward_frame_2 - 0.11 12.7 0.3 0.12 12.6 0.3 1.1 1 0 0 1 1 1 0 Tail specific protease N-terminal domain Kinesin PF00225.23 NODE_73455_length_215_cov_1.061111_g65514_i0reverse_frame_2 - 2e-16 59.8 0.7 2.1e-16 59.8 0.7 1.0 1 0 0 1 1 1 1 Kinesin motor domain Sugar_tr PF00083.24 NODE_73451_length_215_cov_1.100000_g65510_i0reverse_frame_3 - 6.4e-15 55.0 0.3 6.7e-15 54.9 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter ApeC PF16977.5 NODE_73447_length_215_cov_1.105556_g65506_i0reverse_frame_2 - 0.077 12.9 0.0 0.086 12.8 0.0 1.1 1 0 0 1 1 1 0 C-terminal domain of apextrin DUF1411 PF07199.11 NODE_73447_length_215_cov_1.105556_g65506_i0reverse_frame_2 - 0.21 11.2 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1411) Uds1 PF15456.6 NODE_73441_length_215_cov_1.133333_g65500_i0reverse_frame_2 - 0.25 11.5 4.4 0.29 11.3 4.4 1.1 1 0 0 1 1 1 0 Up-regulated During Septation DUF4051 PF13260.6 NODE_73439_length_215_cov_1.177778_g65498_i0reverse_frame_2 - 0.098 12.4 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) AIRS PF00586.24 NODE_73438_length_215_cov_1.188889_g65497_i0reverse_frame_3 - 0.029 15.0 0.3 0.04 14.6 0.3 1.2 1 0 0 1 1 1 0 AIR synthase related protein, N-terminal domain DUF725 PF05267.12 NODE_73435_length_215_cov_1.211111_g65494_i0forward_frame_2 - 0.065 13.2 1.7 0.078 13.0 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF725) Lamprin PF06403.11 NODE_73433_length_215_cov_1.222222_g65492_i0reverse_frame_3 - 0.085 12.8 14.4 0.22 11.5 10.0 2.0 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_73433_length_215_cov_1.222222_g65492_i0reverse_frame_2 - 0.45 10.5 8.1 0.73 9.8 4.7 2.0 1 1 1 2 2 2 0 Lamprin PLDc_2 PF13091.6 NODE_73429_length_215_cov_1.250000_g65488_i0reverse_frame_3 - 0.0023 17.8 0.1 0.0039 17.1 0.1 1.4 1 0 0 1 1 1 1 PLD-like domain DUF4541 PF15074.6 NODE_73428_length_215_cov_1.266667_g65487_i0reverse_frame_3 - 0.0079 16.8 0.0 0.0079 16.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4541) DUF3023 PF11224.8 NODE_73428_length_215_cov_1.266667_g65487_i0reverse_frame_2 - 0.053 13.4 0.1 0.067 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3023) AAA_2 PF07724.14 NODE_73427_length_215_cov_1.288889_g65486_i0reverse_frame_3 - 0.12 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) ketoacyl-synt PF00109.26 NODE_73426_length_215_cov_1.288889_g65485_i0reverse_frame_3 - 0.00016 21.4 0.2 0.00088 18.9 0.1 1.8 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 NODE_73426_length_215_cov_1.288889_g65485_i0reverse_frame_3 - 0.00021 21.3 0.0 0.00026 21.0 0.0 1.1 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain HHV-1_VABD PF16852.5 NODE_73425_length_215_cov_1.294444_g65484_i0reverse_frame_3 - 0.024 14.6 0.4 0.024 14.6 0.4 1.5 2 0 0 2 2 2 0 Herpes viral adaptor-to-host cellular mRNA binding domain Hydrophobin PF01185.18 NODE_73419_length_215_cov_1.322222_g65478_i0reverse_frame_3 - 0.089 13.4 0.1 0.14 12.8 0.1 1.3 1 0 0 1 1 1 0 Fungal hydrophobin Antimicrobial_6 PF08036.11 NODE_73419_length_215_cov_1.322222_g65478_i0reverse_frame_3 - 0.11 12.5 1.0 0.3 11.2 0.2 1.8 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide Lustrin_cystein PF14625.6 NODE_73414_length_215_cov_1.333333_g65473_i0reverse_frame_2 - 0.15 12.5 5.2 0.53 10.7 5.2 2.0 1 1 0 1 1 1 0 Lustrin, cysteine-rich repeated domain EXOSC1 PF10447.9 NODE_73411_length_215_cov_1.344444_g65470_i0forward_frame_3 - 0.11 13.1 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 Exosome component EXOSC1/CSL4 DUF4229 PF14012.6 NODE_73408_length_215_cov_1.377778_g65467_i0forward_frame_2 - 0.064 13.4 3.4 0.065 13.3 2.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4229) Hanta_G2 PF01561.16 NODE_73405_length_215_cov_1.394444_g65464_i0forward_frame_2 - 0.064 11.9 0.0 0.076 11.6 0.0 1.0 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 Prim_Zn_Ribbon PF08273.12 NODE_73399_length_215_cov_1.433333_g65458_i0reverse_frame_3 - 0.097 13.0 2.3 0.43 10.9 2.3 1.9 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase SAM_2 PF07647.17 NODE_73398_length_215_cov_1.438889_g65457_i0reverse_frame_2 - 7.5e-05 22.8 0.0 9.6e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_1 PF00536.30 NODE_73398_length_215_cov_1.438889_g65457_i0reverse_frame_2 - 0.0023 18.3 0.0 0.021 15.2 0.0 2.0 1 1 1 2 2 2 1 SAM domain (Sterile alpha motif) RNA_pol_A_CTD PF03118.15 NODE_73398_length_215_cov_1.438889_g65457_i0reverse_frame_2 - 0.0081 15.9 0.0 0.011 15.4 0.0 1.3 1 1 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain HHH_5 PF14520.6 NODE_73398_length_215_cov_1.438889_g65457_i0reverse_frame_2 - 0.0094 16.5 0.1 0.036 14.7 0.0 1.8 2 0 0 2 2 2 1 Helix-hairpin-helix domain Nodulin-like PF06813.13 NODE_73397_length_215_cov_1.438889_g65456_i0forward_frame_3 - 0.078 12.4 0.2 0.086 12.3 0.2 1.0 1 0 0 1 1 1 0 Nodulin-like Sprouty PF05210.13 NODE_73395_length_215_cov_1.450000_g65454_i0reverse_frame_3 - 0.1 13.0 0.2 0.31 11.4 0.2 1.8 1 1 0 1 1 1 0 Sprouty protein (Spry) PSRP-3_Ycf65 PF04839.13 NODE_73394_length_215_cov_1.455556_g65453_i0reverse_frame_2 - 0.91 9.8 3.5 2.9 8.2 0.3 2.1 2 0 0 2 2 2 0 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) CATSPERD PF15020.6 NODE_73393_length_215_cov_1.461111_g65452_i0reverse_frame_3 - 0.25 9.6 5.0 0.26 9.5 5.0 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit delta Mob_synth_C PF06463.13 NODE_73393_length_215_cov_1.461111_g65452_i0forward_frame_3 - 0.029 14.3 0.4 0.033 14.1 0.4 1.3 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C Mob_synth_C PF06463.13 NODE_73389_length_215_cov_1.483333_g65448_i0reverse_frame_3 - 0.03 14.2 0.5 0.035 14.0 0.5 1.3 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C CATSPERD PF15020.6 NODE_73389_length_215_cov_1.483333_g65448_i0forward_frame_3 - 0.25 9.6 5.0 0.26 9.5 5.0 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit delta TarH PF02203.15 NODE_73387_length_215_cov_1.500000_g65446_i0reverse_frame_2 - 1.9e-05 24.7 0.0 2.2e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Tar ligand binding domain homologue stn_TNFRSF12A PF12191.8 NODE_73387_length_215_cov_1.500000_g65446_i0reverse_frame_2 - 0.062 13.5 0.0 0.064 13.5 0.0 1.1 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain Peptidase_A22B PF04258.13 NODE_73383_length_215_cov_1.511111_g65442_i0forward_frame_3 - 0.0073 15.9 0.1 0.0078 15.8 0.1 1.0 1 0 0 1 1 1 1 Signal peptide peptidase Sulf_transp PF04143.14 NODE_73377_length_215_cov_1.555556_g65436_i0reverse_frame_3 - 0.028 14.0 0.0 0.031 13.9 0.0 1.0 1 0 0 1 1 1 0 Sulphur transport 7tm_3 PF00003.22 NODE_73374_length_215_cov_1.555556_g65433_i0reverse_frame_3 - 0.088 12.5 0.0 0.095 12.4 0.0 1.0 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR DDDD PF10161.9 NODE_73374_length_215_cov_1.555556_g65433_i0reverse_frame_3 - 0.15 11.8 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Putative mitochondrial precursor protein Peptidase_M1_N PF17900.1 NODE_73373_length_215_cov_1.572222_g65432_i0forward_frame_2 - 7.5e-14 52.3 0.0 8.2e-14 52.2 0.0 1.0 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Lamprin PF06403.11 NODE_73372_length_215_cov_1.588889_g65431_i0reverse_frame_3 - 0.0005 20.0 4.7 0.00054 19.9 4.7 1.3 1 0 0 1 1 1 1 Lamprin Sporozoite_P67 PF05642.11 NODE_73372_length_215_cov_1.588889_g65431_i0reverse_frame_3 - 0.3 9.1 3.5 0.28 9.2 3.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Lamprin PF06403.11 NODE_73372_length_215_cov_1.588889_g65431_i0reverse_frame_2 - 0.00016 21.7 3.1 0.00017 21.6 3.1 1.0 1 0 0 1 1 1 1 Lamprin MmgE_PrpD PF03972.14 NODE_73371_length_215_cov_1.611111_g65430_i0forward_frame_2 - 5.5e-17 61.4 0.5 5.8e-17 61.4 0.5 1.0 1 0 0 1 1 1 1 MmgE/PrpD family RhoGAP-FF1 PF16512.5 NODE_73367_length_215_cov_1.622222_g65426_i0reverse_frame_2 - 0.012 16.3 0.3 0.014 16.1 0.3 1.1 1 0 0 1 1 1 0 p190-A and -B Rho GAPs FF domain ERGIC_N PF13850.6 NODE_73367_length_215_cov_1.622222_g65426_i0forward_frame_2 - 0.0038 17.5 0.3 0.0044 17.3 0.3 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF5326 PF17260.2 NODE_73367_length_215_cov_1.622222_g65426_i0forward_frame_2 - 0.011 15.9 0.6 0.012 15.7 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5326) FtsK_4TM PF13491.6 NODE_73367_length_215_cov_1.622222_g65426_i0forward_frame_2 - 0.081 12.6 0.2 0.087 12.5 0.2 1.1 1 0 0 1 1 1 0 4TM region of DNA translocase FtsK/SpoIIIE Polysacc_synt PF01943.17 NODE_73365_length_215_cov_1.638889_g65424_i0reverse_frame_2 - 0.03 13.7 0.0 0.031 13.7 0.0 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF1178 PF06676.11 NODE_73365_length_215_cov_1.638889_g65424_i0forward_frame_2 - 0.029 14.7 0.5 0.033 14.6 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) Replicase PF03090.17 NODE_73365_length_215_cov_1.638889_g65424_i0forward_frame_2 - 0.077 12.8 0.0 0.078 12.8 0.0 1.1 1 0 0 1 1 1 0 Replicase family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks345.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks345.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks345.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks345.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:08:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PG_binding_3 PF09374.10 NODE_73354_length_215_cov_1.705556_g65413_i0reverse_frame_3 - 0.14 12.4 0.0 1.3 9.3 0.0 2.2 2 1 0 2 2 2 0 Predicted Peptidoglycan domain LZ_Tnp_IS481 PF13011.6 NODE_73354_length_215_cov_1.705556_g65413_i0reverse_frame_2 - 1 10.0 3.8 11 6.7 0.8 2.9 1 1 1 2 2 2 0 leucine-zipper of insertion element IS481 EF-hand_1 PF00036.32 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 4.5e-09 35.2 0.5 1.7e-08 33.4 0.2 2.0 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 4.4e-08 32.4 0.1 4e-07 29.4 0.1 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 3e-07 30.8 0.6 3.8e-07 30.5 0.6 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 1.3e-06 27.6 0.3 3.1e-06 26.4 0.3 1.6 1 1 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.002 17.9 0.3 0.0034 17.2 0.3 1.7 1 1 0 1 1 1 1 EF-hand domain pair RecG_N PF17190.4 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.015 16.0 2.9 0.025 15.3 2.9 1.4 1 1 0 1 1 1 0 RecG N-terminal helical domain FadA PF09403.10 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.029 14.8 5.2 0.033 14.7 5.2 1.1 1 0 0 1 1 1 0 Adhesion protein FadA Caleosin PF05042.13 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.082 12.8 0.2 0.13 12.2 0.2 1.5 1 1 0 1 1 1 0 Caleosin related protein DUF365 PF04033.12 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.094 13.0 1.9 0.13 12.5 0.7 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF365) TT_ORF1 PF02956.14 NODE_73350_length_215_cov_1.738889_g65409_i0forward_frame_3 - 5.3 5.6 12.6 5.7 5.5 12.6 1.0 1 0 0 1 1 1 0 TT viral orf 1 UL11 PF11094.8 NODE_73348_length_215_cov_1.761111_g65407_i0reverse_frame_2 - 0.045 13.6 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 Membrane-associated tegument protein Pentapeptide_3 PF13576.6 NODE_73345_length_215_cov_1.766667_g65404_i0reverse_frame_3 - 0.0057 16.8 0.2 0.0072 16.5 0.2 1.1 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) DUSP PF06337.12 NODE_73343_length_215_cov_1.766667_g65402_i0forward_frame_2 - 2.7e-06 27.9 0.2 3.2e-06 27.7 0.2 1.2 1 0 0 1 1 1 1 DUSP domain Npa1 PF11707.8 NODE_73343_length_215_cov_1.766667_g65402_i0forward_frame_2 - 0.032 13.6 0.0 0.038 13.4 0.0 1.0 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal ANAPC5 PF12862.7 NODE_73341_length_215_cov_1.772222_g65400_i0forward_frame_2 - 0.073 13.1 0.0 0.076 13.1 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 5 Hid1 PF12722.7 NODE_73340_length_215_cov_1.772222_g65399_i0forward_frame_3 - 0.58 8.2 3.9 0.54 8.3 3.9 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Mito_carr PF00153.27 NODE_73339_length_215_cov_1.777778_g65398_i0forward_frame_2 - 0.0022 17.9 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein PHD_3 PF13922.6 NODE_73338_length_215_cov_1.783333_g65397_i0reverse_frame_2 - 0.014 15.8 0.4 0.014 15.8 0.4 1.4 2 0 0 2 2 2 0 PHD domain of transcriptional enhancer, Asx Baculo_Y142 PF04913.12 NODE_73337_length_215_cov_1.827778_g65396_i0reverse_frame_3 - 0.0016 17.2 0.3 0.0019 17.0 0.3 1.0 1 0 0 1 1 1 1 Baculovirus Y142 protein 60KD_IMP PF02096.20 NODE_73336_length_215_cov_1.838889_g65395_i0forward_frame_3 - 0.034 14.1 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 60Kd inner membrane protein Chorismate_synt PF01264.21 NODE_73332_length_215_cov_1.855556_g65391_i0forward_frame_2 - 6.1e-21 74.5 0.0 6.7e-21 74.3 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase MIF PF01187.18 NODE_73332_length_215_cov_1.855556_g65391_i0forward_frame_2 - 0.087 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Macrophage migration inhibitory factor (MIF) p450 PF00067.22 NODE_73331_length_215_cov_1.888889_g65390_i0reverse_frame_3 - 7.3e-05 21.7 0.0 7.4e-05 21.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 RVT_2 PF07727.14 NODE_73315_length_215_cov_2.077778_g65374_i0reverse_frame_2 - 7.3e-10 38.9 0.0 7.4e-10 38.9 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) PGP_phosphatase PF09419.10 NODE_73311_length_215_cov_2.161111_g65370_i0forward_frame_2 - 0.095 12.3 0.1 0.1 12.2 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase DUF3747 PF12565.8 NODE_73305_length_215_cov_2.216667_g65364_i0forward_frame_2 - 0.056 12.8 0.0 0.067 12.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3747) Cnd1 PF12717.7 NODE_73304_length_215_cov_2.233333_g65363_i0forward_frame_3 - 0.024 14.7 0.5 0.025 14.6 0.5 1.0 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 YmgB PF10798.8 NODE_73301_length_215_cov_2.294444_g65360_i0forward_frame_2 - 8.4e-05 22.3 0.4 0.00012 21.9 0.4 1.3 1 0 0 1 1 1 1 Biofilm development protein YmgB/AriR V_ATPase_I PF01496.19 NODE_73299_length_215_cov_2.355556_g65358_i0reverse_frame_2 - 2.8e-06 25.6 0.1 3.1e-06 25.4 0.1 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family ZT_dimer PF16916.5 NODE_73299_length_215_cov_2.355556_g65358_i0forward_frame_2 - 0.082 13.0 0.0 0.093 12.9 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain of Zinc Transporter OS-D PF03392.13 NODE_73298_length_215_cov_2.388889_g65357_i0forward_frame_3 - 0.26 11.4 4.2 0.31 11.2 4.2 1.1 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D DUF2536 PF10750.9 NODE_73293_length_215_cov_2.444444_g65352_i0reverse_frame_2 - 0.0089 15.9 0.4 0.012 15.5 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2536) ZT_dimer PF16916.5 NODE_73292_length_215_cov_2.466667_g65351_i0reverse_frame_3 - 0.061 13.4 0.4 0.077 13.1 0.4 1.1 1 0 0 1 1 1 0 Dimerisation domain of Zinc Transporter IN_DBD_C PF00552.21 NODE_73289_length_215_cov_2.511111_g65348_i0forward_frame_3 - 0.057 12.7 1.6 0.079 12.3 1.6 1.3 1 0 0 1 1 1 0 Integrase DNA binding domain Pkinase PF00069.25 NODE_73275_length_215_cov_3.300000_g65334_i0forward_frame_3 - 3.3e-10 39.8 0.0 3.8e-10 39.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_73275_length_215_cov_3.300000_g65334_i0forward_frame_3 - 0.0013 18.0 0.0 0.0016 17.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4752 PF15944.5 NODE_73275_length_215_cov_3.300000_g65334_i0forward_frame_2 - 0.094 12.8 0.2 0.14 12.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) Amidase PF01425.21 NODE_73273_length_215_cov_3.450000_g65332_i0reverse_frame_2 - 7.8e-05 21.8 0.0 8.6e-05 21.7 0.0 1.0 1 0 0 1 1 1 1 Amidase ChpXY PF10216.9 NODE_73273_length_215_cov_3.450000_g65332_i0forward_frame_2 - 0.0069 15.6 0.2 0.0079 15.4 0.2 1.0 1 0 0 1 1 1 1 CO2 hydration protein (ChpXY) LCD1 PF09798.9 NODE_73272_length_215_cov_3.744444_g65331_i0reverse_frame_3 - 0.076 11.5 5.6 0.082 11.4 5.6 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein Bclx_interact PF08945.10 NODE_73272_length_215_cov_3.744444_g65331_i0reverse_frame_3 - 0.087 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Bcl-x interacting, BH3 domain DUF4741 PF15897.5 NODE_73271_length_215_cov_3.855556_g65330_i0reverse_frame_2 - 0.09 12.6 1.2 0.098 12.5 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) GRASP55_65 PF04495.14 NODE_73268_length_215_cov_4.211111_g65327_i0forward_frame_2 - 3e-10 40.5 0.0 3.5e-10 40.3 0.0 1.0 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain SAM35 PF10806.8 NODE_73268_length_215_cov_4.211111_g65327_i0forward_frame_2 - 0.11 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 SAM35, subunit of SAM coomplex EF_TS PF00889.19 NODE_73264_length_215_cov_4.633333_g65323_i0forward_frame_2 - 7.6e-22 77.9 0.6 8.2e-22 77.8 0.6 1.0 1 0 0 1 1 1 1 Elongation factor TS Polyketide_cyc PF03364.20 NODE_73264_length_215_cov_4.633333_g65323_i0forward_frame_2 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport YojJ PF10372.9 NODE_73261_length_215_cov_5.222222_g65320_i0forward_frame_3 - 0.053 13.6 1.0 0.14 12.3 0.0 1.9 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Titin_Ig-rpts PF06582.12 NODE_73261_length_215_cov_5.222222_g65320_i0forward_frame_2 - 0.15 12.0 1.0 0.25 11.3 1.0 1.2 1 0 0 1 1 1 0 Titin repeat Rab_bind PF16704.5 NODE_73258_length_215_cov_6.966667_g65317_i0reverse_frame_2 - 0.19 11.8 0.5 0.3 11.2 0.5 1.3 1 1 0 1 1 1 0 Rab binding domain tRNA_m1G_MT PF01746.21 NODE_73248_length_215_cov_36.155556_g65307_i0forward_frame_3 - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 tRNA (Guanine-1)-methyltransferase Gyro_capsid PF04162.12 NODE_73243_length_215_cov_42.944444_g65302_i0forward_frame_3 - 0.15 10.5 0.0 0.16 10.4 0.0 1.0 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) TAT_signal PF10518.9 NODE_73243_length_215_cov_42.944444_g65302_i0forward_frame_3 - 0.25 11.2 1.2 0.36 10.8 1.2 1.2 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence DUF2593 PF10767.9 NODE_73239_length_215_cov_44.733333_g65298_i0forward_frame_2 - 0.045 13.8 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2593) Imm72 PF15584.6 NODE_73234_length_215_cov_47.772222_g65293_i0forward_frame_3 - 0.04 14.0 0.0 0.046 13.8 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 72 EPV_E5 PF08135.11 NODE_73228_length_215_cov_50.988889_g65287_i0forward_frame_3 - 0.22 11.9 4.8 0.46 10.9 4.8 1.5 1 0 0 1 1 1 0 Major transforming protein E5 family TAFII55_N PF04658.13 NODE_73225_length_215_cov_54.511111_g65284_i0reverse_frame_3 - 0.0046 16.7 0.2 0.0054 16.5 0.2 1.0 1 0 0 1 1 1 1 TAFII55 protein conserved region DUF5634_N PF18672.1 NODE_73219_length_215_cov_57.988889_g65278_i0forward_frame_3 - 0.12 12.1 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5634) CYYR1 PF10873.8 NODE_73218_length_215_cov_58.022222_g65277_i0reverse_frame_2 - 0.0041 17.6 3.0 0.0043 17.5 3.0 1.0 1 0 0 1 1 1 1 Cysteine and tyrosine-rich protein 1 KDZ PF18758.1 NODE_73212_length_215_cov_65.438889_g65271_i0forward_frame_2 - 0.058 13.0 0.3 0.069 12.8 0.3 1.2 1 0 0 1 1 1 0 Kyakuja-Dileera-Zisupton transposase Folate_carrier PF01770.18 NODE_73210_length_215_cov_67.327778_g65269_i0forward_frame_3 - 0.029 13.1 0.6 0.027 13.2 0.6 1.0 1 0 0 1 1 1 0 Reduced folate carrier DUF809 PF05663.11 NODE_73202_length_215_cov_74.527778_g65261_i0reverse_frame_2 - 0.14 12.3 1.5 0.14 12.3 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) TAP35_44 PF07265.11 NODE_73200_length_215_cov_76.416667_g65259_i0reverse_frame_3 - 0.26 11.3 0.2 0.26 11.3 0.2 1.7 2 0 0 2 2 2 0 Tapetum specific protein TAP35/TAP44 PutA_N PF18083.1 NODE_73197_length_215_cov_86.038889_g65256_i0forward_frame_2 - 0.084 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Proline utilization A N-terminal domain FeoB_N PF02421.18 NODE_73196_length_215_cov_97.316667_g65255_i0forward_frame_3 - 0.011 15.2 2.2 0.013 15.0 2.2 1.0 1 0 0 1 1 1 0 Ferrous iron transport protein B Glucos_trans_II PF14264.6 NODE_73193_length_215_cov_109.716667_g65252_i0forward_frame_3 - 0.11 11.9 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII Tmpp129 PF10272.9 NODE_73192_length_215_cov_111.650000_g65251_i0forward_frame_3 - 0.0055 16.1 1.0 0.0059 16.0 1.0 1.1 1 0 0 1 1 1 1 Putative transmembrane protein precursor DUF2380 PF09533.10 NODE_73191_length_215_cov_120.444444_g65250_i0reverse_frame_2 - 0.04 13.5 1.3 0.047 13.3 1.3 1.2 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) Mdv1 PF11542.8 NODE_73188_length_215_cov_154.133333_g65247_i0forward_frame_3 - 0.071 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial division protein 1 SLC3A2_N PF16028.5 NODE_73186_length_215_cov_193.855556_g65245_i0reverse_frame_2 - 0.12 11.9 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus SUIM_assoc PF16619.5 NODE_73185_length_215_cov_199.155556_g65244_i0reverse_frame_2 - 0.034 14.2 1.1 0.041 13.9 1.1 1.1 1 0 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 RAP1 PF07218.11 NODE_73180_length_215_cov_238.477778_g65239_i0forward_frame_3 - 1.2 7.4 5.6 1.3 7.3 5.6 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) PsaF PF17550.2 NODE_73178_length_215_cov_302.622222_g65237_i0forward_frame_3 - 0.14 11.6 5.2 0.16 11.5 5.2 1.2 1 0 0 1 1 1 0 Family of unknown function Tetraspanin PF00335.20 NODE_73176_length_215_cov_486.405556_g65235_i0forward_frame_3 - 0.11 12.2 2.1 0.12 12.1 2.1 1.0 1 0 0 1 1 1 0 Tetraspanin family TadE PF07811.12 NODE_73176_length_215_cov_486.405556_g65235_i0forward_frame_3 - 0.75 10.1 6.3 1.6 9.1 1.0 2.1 2 0 0 2 2 2 0 TadE-like protein PsbN PF02468.15 NODE_73176_length_215_cov_486.405556_g65235_i0forward_frame_3 - 3.2 7.7 4.6 1 9.2 0.1 2.1 2 1 0 2 2 2 0 Photosystem II reaction centre N protein (psbN) Methyltransf_32 PF13679.6 NODE_73170_length_215_cov_85802.911111_g65229_i0reverse_frame_2 - 0.049 13.6 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DUF1435 PF07256.12 NODE_73166_length_216_cov_0.872928_g65225_i0reverse_frame_2 - 0.13 12.4 6.2 0.16 12.1 6.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1435) PCAF_N PF06466.11 NODE_73159_length_216_cov_0.883978_g65218_i0reverse_frame_3 - 0.021 14.4 0.1 0.023 14.2 0.1 1.0 1 0 0 1 1 1 0 PCAF (P300/CBP-associated factor) N-terminal domain Glycos_transf_1 PF00534.20 NODE_73153_length_216_cov_0.911602_g65212_i0forward_frame_3 - 0.002 17.7 0.1 0.0023 17.5 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_tran_28_C PF04101.16 NODE_73153_length_216_cov_0.911602_g65212_i0forward_frame_3 - 0.0025 17.8 0.1 0.0065 16.5 0.1 1.6 1 1 1 2 2 2 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_4 PF13692.6 NODE_73153_length_216_cov_0.911602_g65212_i0forward_frame_3 - 0.043 14.2 0.1 0.047 14.1 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF2256 PF10013.9 NODE_73150_length_216_cov_0.977901_g65209_i0reverse_frame_3 - 0.026 14.6 0.3 0.042 14.0 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) YrhK PF14145.6 NODE_73144_length_216_cov_1.000000_g65203_i0reverse_frame_3 - 0.012 15.4 0.3 0.016 15.1 0.3 1.2 1 0 0 1 1 1 0 YrhK-like protein Ras PF00071.22 NODE_73141_length_216_cov_1.022099_g65200_i0reverse_frame_2 - 0.046 13.3 0.0 0.054 13.1 0.0 1.0 1 0 0 1 1 1 0 Ras family MIT_C PF16565.5 NODE_73138_length_216_cov_1.055249_g65197_i0reverse_frame_3 - 0.028 14.4 0.0 0.028 14.4 0.0 1.0 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT ABC_export PF16962.5 NODE_73138_length_216_cov_1.055249_g65197_i0forward_frame_3 - 0.016 13.7 0.4 0.016 13.7 0.4 1.0 1 0 0 1 1 1 0 Putative ABC exporter HupE_UreJ_2 PF13795.6 NODE_73138_length_216_cov_1.055249_g65197_i0forward_frame_3 - 0.059 13.0 0.0 0.065 12.9 0.0 1.1 1 0 0 1 1 1 0 HupE / UreJ protein CFC PF09443.10 NODE_73134_length_216_cov_1.093923_g65193_i0forward_frame_3 - 0.0059 16.4 2.3 0.0092 15.8 2.3 1.3 1 0 0 1 1 1 1 Cripto_Frl-1_Cryptic (CFC) DUF3055 PF11256.8 NODE_73133_length_216_cov_1.099448_g65192_i0forward_frame_2 - 0.079 13.2 0.0 0.097 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3055) TP53IP5 PF15331.6 NODE_73127_length_216_cov_1.143646_g65186_i0forward_frame_3 - 0.065 13.4 2.3 0.084 13.0 2.3 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 DUF1289 PF06945.13 NODE_73125_length_216_cov_1.160221_g65184_i0reverse_frame_3 - 0.091 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) HCV_NS1 PF01560.17 NODE_73124_length_216_cov_1.176796_g65183_i0forward_frame_2 - 0.058 12.1 0.1 0.059 12.1 0.1 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein E2/NS1 Leu_zip PF15294.6 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.0073 15.8 3.8 0.0083 15.7 3.8 1.0 1 0 0 1 1 1 1 Leucine zipper ZapB PF06005.12 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.012 16.1 5.7 0.017 15.6 5.7 1.4 1 1 0 1 1 1 0 Cell division protein ZapB DUF4647 PF15504.6 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.026 13.6 1.7 0.025 13.7 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4647) DivIC PF04977.15 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.027 14.2 1.9 0.038 13.8 1.9 1.3 1 0 0 1 1 1 0 Septum formation initiator TMF_DNA_bd PF12329.8 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.068 13.2 4.7 0.078 13.0 4.7 1.3 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Fungus-induced PF10917.8 NODE_73123_length_216_cov_1.176796_g65182_i0forward_frame_3 - 9.3 6.7 6.9 1.1 9.6 1.6 2.0 2 0 0 2 2 2 0 Fungus-induced protein zf-met2 PF12907.7 NODE_73120_length_216_cov_1.193370_g65179_i0reverse_frame_2 - 0.092 12.9 2.0 0.13 12.4 2.0 1.2 1 0 0 1 1 1 0 Zinc-binding ISG65-75 PF11727.8 NODE_73120_length_216_cov_1.193370_g65179_i0forward_frame_3 - 0.23 10.6 3.1 0.27 10.4 3.1 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein CAMSAP_CC1 PF17095.5 NODE_73119_length_216_cov_1.198895_g65178_i0reverse_frame_2 - 0.12 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Spectrin-binding region of Ca2+-Calmodulin DUF3370 PF11850.8 NODE_73118_length_216_cov_1.209945_g65177_i0reverse_frame_3 - 0.014 14.3 0.2 0.015 14.3 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3370) PUF PF00806.19 NODE_73118_length_216_cov_1.209945_g65177_i0reverse_frame_3 - 0.11 12.3 0.1 0.24 11.1 0.1 1.6 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat PriA_C PF18074.1 NODE_73117_length_216_cov_1.215470_g65176_i0forward_frame_3 - 0.038 14.8 1.0 0.042 14.7 1.0 1.2 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain PH PF00169.29 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 1.5e-06 28.7 0.1 1.7e-06 28.4 0.1 1.1 1 0 0 1 1 1 1 PH domain PH_6 PF15406.6 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 0.013 15.7 0.1 0.017 15.4 0.1 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain PH_13 PF16652.5 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 0.026 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain PH_11 PF15413.6 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 0.045 14.2 0.1 0.052 14.0 0.1 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain PH_9 PF15410.6 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 0.099 13.0 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain LIME1 PF15332.6 NODE_73114_length_216_cov_1.243094_g65173_i0reverse_frame_3 - 0.068 12.8 0.0 0.075 12.6 0.0 1.1 1 0 0 1 1 1 0 Lck-interacting transmembrane adapter 1 zf-B_box PF00643.24 NODE_73110_length_216_cov_1.259669_g65169_i0reverse_frame_2 - 0.044 13.9 3.3 0.044 13.9 3.3 1.5 2 0 0 2 2 2 0 B-box zinc finger DUF3987 PF13148.6 NODE_73107_length_216_cov_1.281768_g65166_i0reverse_frame_3 - 0.078 12.0 0.1 0.091 11.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) DUF4342 PF14242.6 NODE_73101_length_216_cov_1.303867_g65160_i0forward_frame_2 - 4.4 7.4 7.0 5.6 7.0 7.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) zf-HC5HC2H_2 PF13832.6 NODE_73100_length_216_cov_1.303867_g65159_i0reverse_frame_3 - 0.0017 18.5 0.2 0.0028 17.8 0.2 1.3 1 0 0 1 1 1 1 PHD-zinc-finger like domain Gp49 PF05973.14 NODE_73099_length_216_cov_1.314917_g65158_i0reverse_frame_2 - 0.044 13.9 0.0 0.053 13.7 0.0 1.1 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) EutA PF06277.11 NODE_73098_length_216_cov_1.320442_g65157_i0forward_frame_3 - 0.1 11.4 0.0 0.11 11.3 0.0 1.0 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutA Pga1 PF10333.9 NODE_73097_length_216_cov_1.320442_g65156_i0reverse_frame_2 - 0.014 15.3 1.0 0.014 15.3 1.0 1.0 1 0 0 1 1 1 0 GPI-Mannosyltransferase II co-activator tRNA-synt_2 PF00152.20 NODE_73094_length_216_cov_1.320442_g65153_i0forward_frame_2 - 6.6e-20 71.4 0.0 6.9e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) AAA PF00004.29 NODE_73090_length_216_cov_1.325967_g65149_i0forward_frame_3 - 4.2e-05 24.0 0.0 4.4e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Strabismus PF06638.11 NODE_73089_length_216_cov_1.325967_g65148_i0reverse_frame_3 - 0.75 8.4 7.1 0.88 8.1 7.1 1.0 1 0 0 1 1 1 0 Strabismus protein SUR7 PF06687.12 NODE_73089_length_216_cov_1.325967_g65148_i0reverse_frame_3 - 0.91 9.1 10.9 1 8.9 10.9 1.0 1 0 0 1 1 1 0 SUR7/PalI family NicO PF03824.16 NODE_73089_length_216_cov_1.325967_g65148_i0reverse_frame_3 - 3 7.1 11.5 3.4 6.9 11.5 1.0 1 0 0 1 1 1 0 High-affinity nickel-transport protein DUF4407 PF14362.6 NODE_73089_length_216_cov_1.325967_g65148_i0reverse_frame_3 - 8 5.7 8.6 8.7 5.6 8.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf_CopZ PF18423.1 NODE_73085_length_216_cov_1.325967_g65144_i0reverse_frame_3 - 0.047 13.6 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Zinc binding domain Metal_CEHH PF14455.6 NODE_73076_length_216_cov_1.397790_g65135_i0reverse_frame_2 - 0.17 11.5 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Predicted metal binding domain TT_ORF1 PF02956.14 NODE_73072_length_216_cov_1.425414_g65131_i0reverse_frame_2 - 4 6.0 25.4 4.2 5.9 25.4 1.0 1 0 0 1 1 1 0 TT viral orf 1 FoP_duplication PF13865.6 NODE_73072_length_216_cov_1.425414_g65131_i0reverse_frame_2 - 5.8 7.5 12.3 7.5 7.2 12.3 1.1 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 UPF0061 PF02696.14 NODE_73072_length_216_cov_1.425414_g65131_i0forward_frame_2 - 0.038 12.8 0.3 0.042 12.6 0.3 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family DUF4195 PF13836.6 NODE_73069_length_216_cov_1.430939_g65128_i0forward_frame_2 - 0.031 14.4 3.0 0.038 14.1 3.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4195) XPA_N PF01286.18 NODE_73068_length_216_cov_1.453039_g65127_i0reverse_frame_2 - 1.7 8.7 5.1 8.3 6.5 0.2 2.6 2 0 0 2 2 2 0 XPA protein N-terminal RNA_binding PF01877.17 NODE_73066_length_216_cov_1.464088_g65125_i0reverse_frame_2 - 0.055 13.7 0.1 0.067 13.5 0.1 1.1 1 0 0 1 1 1 0 RNA binding FluMu_N PF17891.1 NODE_73062_length_216_cov_1.524862_g65121_i0reverse_frame_2 - 0.16 11.7 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 Mu-like prophage FluMu N-terminal domain DUF4599 PF15371.6 NODE_73058_length_216_cov_1.546961_g65117_i0reverse_frame_2 - 0.0084 16.6 0.6 0.01 16.4 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4599) Lamprin PF06403.11 NODE_73057_length_216_cov_1.552486_g65116_i0reverse_frame_3 - 0.00066 19.7 2.8 0.00076 19.5 2.8 1.1 1 0 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_73057_length_216_cov_1.552486_g65116_i0reverse_frame_2 - 0.029 14.3 2.7 0.037 14.0 2.7 1.1 1 0 0 1 1 1 0 Lamprin Cytochrom_C1 PF02167.15 NODE_73054_length_216_cov_1.580110_g65113_i0reverse_frame_3 - 0.058 13.1 0.0 0.058 13.1 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C1 family DUF4596 PF15363.6 NODE_73053_length_216_cov_1.580110_g65112_i0reverse_frame_2 - 0.049 13.9 0.0 0.079 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4596) Nitr_red_alph_N PF14710.6 NODE_73044_length_216_cov_1.674033_g65103_i0reverse_frame_2 - 1.4 9.4 4.9 2 8.9 4.9 1.2 1 0 0 1 1 1 0 Respiratory nitrate reductase alpha N-terminal Zn_Tnp_IS1 PF03811.13 NODE_73043_length_216_cov_1.679558_g65102_i0reverse_frame_3 - 0.047 13.4 2.2 1.1 9.1 0.1 2.3 2 0 0 2 2 2 0 InsA N-terminal domain RVT_1 PF00078.27 NODE_73042_length_216_cov_1.690608_g65101_i0forward_frame_3 - 9.6e-07 28.5 0.0 1e-06 28.5 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) SMODS PF18144.1 NODE_73040_length_216_cov_1.701657_g65099_i0reverse_frame_3 - 0.027 14.6 0.1 0.028 14.6 0.1 1.1 1 0 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain Aldolase PF01081.19 NODE_73038_length_216_cov_1.734807_g65097_i0forward_frame_2 - 5.7e-34 117.3 0.0 6.1e-34 117.2 0.0 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase KDGP_aldolase PF07071.11 NODE_73038_length_216_cov_1.734807_g65097_i0forward_frame_2 - 0.23 11.2 0.0 0.27 11.0 0.0 1.0 1 0 0 1 1 1 0 KDGP aldolase Cyclin_N PF00134.23 NODE_73037_length_216_cov_1.740331_g65096_i0forward_frame_3 - 2.7e-05 23.9 0.7 3e-05 23.8 0.7 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain CAMSAP_CC1 PF17095.5 NODE_73034_length_216_cov_1.740331_g65093_i0reverse_frame_3 - 0.019 14.8 0.0 0.026 14.4 0.0 1.2 1 0 0 1 1 1 0 Spectrin-binding region of Ca2+-Calmodulin ACT PF01842.25 NODE_73031_length_216_cov_1.756906_g65090_i0forward_frame_2 - 0.053 13.3 0.0 0.086 12.6 0.0 1.3 1 0 0 1 1 1 0 ACT domain Attacin_N PF03768.15 NODE_73030_length_216_cov_1.762431_g65089_i0reverse_frame_3 - 0.0032 17.6 0.2 0.0037 17.3 0.2 1.3 1 0 0 1 1 1 1 Attacin, N-terminal region Citrus_P18 PF05520.11 NODE_73027_length_216_cov_1.762431_g65086_i0forward_frame_3 - 0.00091 19.0 0.2 0.00098 18.9 0.2 1.1 1 0 0 1 1 1 1 Citrus tristeza virus P18 protein DUF5439 PF17507.2 NODE_73021_length_216_cov_1.767956_g65080_i0reverse_frame_2 - 0.098 12.9 6.0 0.43 10.8 0.8 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5439) CCER1 PF15482.6 NODE_73019_length_216_cov_1.773481_g65078_i0forward_frame_2 - 2.5 7.9 6.9 2.7 7.8 6.9 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 RcbX PF02341.15 NODE_73018_length_216_cov_1.790055_g65077_i0reverse_frame_2 - 0.13 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 RbcX protein HTH_Tnp_ISL3 PF13542.6 NODE_73016_length_216_cov_1.806630_g65075_i0forward_frame_3 - 0.21 11.0 6.3 3.7 7.0 4.5 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 DUF1509 PF07420.11 NODE_73016_length_216_cov_1.806630_g65075_i0forward_frame_3 - 2.2 7.1 8.6 2.3 7.1 8.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) TT_ORF1 PF02956.14 NODE_73016_length_216_cov_1.806630_g65075_i0forward_frame_3 - 6.2 5.4 12.2 6.6 5.3 12.2 1.0 1 0 0 1 1 1 0 TT viral orf 1 Arch_fla_DE PF04659.13 NODE_73015_length_216_cov_1.812155_g65074_i0reverse_frame_3 - 0.034 14.0 0.0 0.037 13.9 0.0 1.1 1 0 0 1 1 1 0 Archaeal flagella protein Vpu PF00558.19 NODE_73013_length_216_cov_1.856354_g65072_i0reverse_frame_2 - 0.032 14.0 0.6 0.035 13.9 0.6 1.1 1 0 0 1 1 1 0 Vpu protein DNA_methylase PF00145.17 NODE_73011_length_216_cov_1.861878_g65070_i0reverse_frame_2 - 0.00061 19.2 0.2 0.00061 19.2 0.2 1.3 2 0 0 2 2 2 1 C-5 cytosine-specific DNA methylase TPR_11 PF13414.6 NODE_73010_length_216_cov_1.861878_g65069_i0reverse_frame_3 - 0.00012 21.7 0.0 0.00034 20.2 0.0 1.8 2 0 0 2 2 2 1 TPR repeat TPR_1 PF00515.28 NODE_73010_length_216_cov_1.861878_g65069_i0reverse_frame_3 - 0.00064 19.4 0.5 0.001 18.8 0.5 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat Mac PF12464.8 NODE_73010_length_216_cov_1.861878_g65069_i0reverse_frame_2 - 0.26 11.6 2.5 0.38 11.0 2.5 1.2 1 0 0 1 1 1 0 Maltose acetyltransferase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks346.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks346.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks346.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks346.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4811 PF16069.5 NODE_73007_length_216_cov_1.878453_g65066_i0forward_frame_3 - 0.0099 15.8 0.5 0.011 15.7 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4811) NAAA-beta PF15508.6 NODE_73007_length_216_cov_1.878453_g65066_i0forward_frame_2 - 0.18 12.1 0.0 0.26 11.6 0.0 1.2 1 0 0 1 1 1 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase Pro_isomerase PF00160.21 NODE_73002_length_216_cov_1.911602_g65061_i0reverse_frame_2 - 0.1 12.9 0.0 0.1 12.9 0.0 1.0 1 0 0 1 1 1 0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MNNL PF07657.13 NODE_73002_length_216_cov_1.911602_g65061_i0forward_frame_2 - 0.33 11.0 6.3 0.38 10.8 6.3 1.1 1 0 0 1 1 1 0 N terminus of Notch ligand CSTF1_dimer PF16699.5 NODE_72997_length_216_cov_1.933702_g65056_i0forward_frame_3 - 0.1 12.4 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Cleavage stimulation factor subunit 1, dimerisation domain DUF1398 PF07166.11 NODE_72997_length_216_cov_1.933702_g65056_i0forward_frame_2 - 0.036 14.1 0.2 0.04 14.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) GAIN_A PF18619.1 NODE_72994_length_216_cov_1.983425_g65053_i0forward_frame_2 - 0.18 12.0 5.5 0.38 11.0 5.5 1.8 1 1 0 1 1 1 0 GPCR-Autoproteolysis-INducing (GAIN) subdomain A GBP PF02263.19 NODE_72993_length_216_cov_1.988950_g65052_i0reverse_frame_3 - 3.7e-16 59.2 0.1 4.2e-16 59.0 0.1 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain HTH_48 PF17906.1 NODE_72992_length_216_cov_1.988950_g65051_i0forward_frame_3 - 0.1 12.7 0.1 0.18 12.0 0.1 1.4 1 0 0 1 1 1 0 HTH domain in Mos1 transposase FAM150 PF15129.6 NODE_72989_length_216_cov_2.055249_g65048_i0reverse_frame_3 - 0.29 11.3 5.1 0.2 11.8 2.7 1.7 1 1 1 2 2 2 0 FAM150 family COP-gamma_platf PF08752.10 NODE_72988_length_216_cov_2.066298_g65047_i0reverse_frame_2 - 0.09 12.9 0.1 0.09 12.9 0.1 1.1 1 0 0 1 1 1 0 Coatomer gamma subunit appendage platform subdomain CCB2_CCB4 PF11152.8 NODE_72973_length_216_cov_2.193370_g65032_i0forward_frame_3 - 0.033 13.5 0.0 0.037 13.3 0.0 1.0 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B, CCB2/CCB4 BioT2 PF15368.6 NODE_72972_length_216_cov_2.209945_g65031_i0reverse_frame_2 - 0.075 13.0 0.0 0.078 12.9 0.0 1.0 1 0 0 1 1 1 0 Spermatogenesis family BioT2 Phage_holin_2_1 PF04971.12 NODE_72966_length_216_cov_2.243094_g65025_i0reverse_frame_3 - 0.028 14.4 0.2 0.041 13.9 0.2 1.3 1 0 0 1 1 1 0 Bacteriophage P21 holin S TAFII28 PF04719.14 NODE_72965_length_216_cov_2.248619_g65024_i0reverse_frame_2 - 0.016 15.2 0.3 0.018 15.1 0.3 1.1 1 0 0 1 1 1 0 hTAFII28-like protein conserved region Vps23_core PF09454.10 NODE_72965_length_216_cov_2.248619_g65024_i0forward_frame_3 - 0.067 13.1 0.0 0.12 12.4 0.0 1.4 1 1 0 1 1 1 0 Vps23 core domain Y_phosphatase2 PF03162.13 NODE_72963_length_216_cov_2.287293_g65022_i0reverse_frame_3 - 0.05 13.2 0.1 0.052 13.1 0.1 1.0 1 0 0 1 1 1 0 Tyrosine phosphatase family KaiA PF07688.12 NODE_72962_length_216_cov_2.292818_g65021_i0reverse_frame_3 - 0.059 13.5 1.4 0.069 13.3 1.4 1.0 1 0 0 1 1 1 0 KaiA C-terminal domain RecR PF02132.15 NODE_72960_length_216_cov_2.320442_g65019_i0forward_frame_2 - 0.063 12.9 0.8 0.11 12.1 0.2 1.7 2 0 0 2 2 2 0 RecR protein TctB PF07331.11 NODE_72959_length_216_cov_2.325967_g65018_i0forward_frame_2 - 0.24 11.6 7.8 0.29 11.4 7.8 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Tubulin PF00091.25 NODE_72957_length_216_cov_2.342541_g65016_i0reverse_frame_3 - 8.6e-08 32.6 0.0 9.1e-08 32.5 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain TrmO_C PF18389.1 NODE_72957_length_216_cov_2.342541_g65016_i0forward_frame_3 - 0.033 14.3 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 TrmO C-terminal domain AP3D1 PF06375.11 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.011 15.9 9.9 0.013 15.7 9.9 1.0 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 YL1 PF05764.13 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.013 15.6 11.0 0.014 15.5 11.0 1.0 1 0 0 1 1 1 0 YL1 nuclear protein SR-25 PF10500.9 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.035 13.7 11.0 0.036 13.7 11.0 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein NESP55 PF06390.12 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.039 13.6 2.3 0.04 13.5 2.3 1.0 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) RNA_polI_A34 PF08208.11 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.057 13.5 11.0 0.062 13.4 11.0 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 TSGP1 PF07771.11 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.12 12.5 8.2 0.14 12.4 8.2 1.2 1 0 0 1 1 1 0 Tick salivary peptide group 1 Connexin PF00029.19 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 4 7.1 4.3 4.1 7.1 4.3 1.0 1 0 0 1 1 1 0 Connexin Phage_holin_3_6 PF07332.11 NODE_72955_length_216_cov_2.392265_g65014_i0forward_frame_3 - 0.021 14.9 1.6 0.024 14.7 1.6 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III TMEM18 PF14770.6 NODE_72955_length_216_cov_2.392265_g65014_i0forward_frame_3 - 0.15 12.0 3.2 0.18 11.8 3.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 DUF2574 PF10836.8 NODE_72954_length_216_cov_2.397790_g65013_i0reverse_frame_3 - 4.9e-21 74.4 0.1 6e-21 74.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2574) Afaf PF15339.6 NODE_72949_length_216_cov_2.419890_g65008_i0forward_frame_2 - 0.12 12.1 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Acrosome formation-associated factor DUF4834 PF16118.5 NODE_72944_length_216_cov_2.535912_g65003_i0forward_frame_3 - 0.029 15.3 0.3 0.035 15.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) FAM176 PF14851.6 NODE_72944_length_216_cov_2.535912_g65003_i0forward_frame_3 - 0.043 13.5 0.1 0.045 13.4 0.1 1.0 1 0 0 1 1 1 0 FAM176 family Pho88 PF10032.9 NODE_72944_length_216_cov_2.535912_g65003_i0forward_frame_3 - 0.051 12.8 0.2 0.059 12.6 0.2 1.1 1 0 0 1 1 1 0 Phosphate transport (Pho88) Amb_V_allergen PF03913.13 NODE_72943_length_216_cov_2.541436_g65002_i0reverse_frame_3 - 0.045 13.7 0.1 0.057 13.4 0.1 1.1 1 0 0 1 1 1 0 Amb V Allergen YbjN PF10722.9 NODE_72941_length_216_cov_2.596685_g65000_i0reverse_frame_2 - 9.3e-08 32.2 0.0 9.4e-08 32.2 0.0 1.0 1 0 0 1 1 1 1 Putative bacterial sensory transduction regulator malic PF00390.19 NODE_72941_length_216_cov_2.596685_g65000_i0reverse_frame_2 - 0.091 12.5 0.0 0.094 12.5 0.0 1.1 1 0 0 1 1 1 0 Malic enzyme, N-terminal domain Hpt PF01627.23 NODE_72937_length_216_cov_2.646409_g64996_i0reverse_frame_2 - 7.8e-05 22.9 0.0 9.1e-05 22.6 0.0 1.3 1 1 0 1 1 1 1 Hpt domain Nse4_C PF08743.10 NODE_72937_length_216_cov_2.646409_g64996_i0reverse_frame_2 - 0.021 15.1 0.0 0.025 14.9 0.0 1.3 1 1 0 1 1 1 0 Nse4 C-terminal DUF3778 PF12620.8 NODE_72937_length_216_cov_2.646409_g64996_i0forward_frame_2 - 0.097 12.3 0.1 0.14 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3778) Glyco_transf_20 PF00982.21 NODE_72934_length_216_cov_2.662983_g64993_i0reverse_frame_2 - 6.1e-11 41.7 0.0 6.4e-11 41.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 EppA_BapA PF07268.11 NODE_72934_length_216_cov_2.662983_g64993_i0forward_frame_3 - 0.13 12.2 0.0 0.22 11.5 0.0 1.4 1 1 1 2 2 2 0 Exported protein precursor (EppA/BapA) HTH_24 PF13412.6 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 6.4e-09 35.2 0.8 8.1e-09 34.9 0.8 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.00018 21.4 0.1 0.00027 20.8 0.0 1.4 2 0 0 2 2 2 1 MarR family HTH_AsnC-type PF13404.6 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.00028 20.7 0.4 0.00047 19.9 0.4 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.00044 19.7 0.1 0.00065 19.2 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_11 PF08279.12 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.0018 18.2 0.4 0.0023 17.8 0.4 1.2 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.012 15.5 0.1 0.016 15.1 0.1 1.3 1 0 0 1 1 1 0 MarR family Arg_repressor PF01316.21 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.014 15.1 0.6 0.017 14.9 0.6 1.2 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain HTH_5 PF01022.20 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.085 12.7 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family LacI PF00356.21 NODE_72929_length_216_cov_2.878453_g64988_i0reverse_frame_2 - 0.069 12.9 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family DUF4050 PF13259.6 NODE_72928_length_216_cov_2.889503_g64987_i0reverse_frame_3 - 0.24 11.7 0.6 0.29 11.4 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) HATPase_c PF02518.26 NODE_72924_length_216_cov_2.977901_g64983_i0forward_frame_3 - 1.2e-06 29.0 0.0 1.4e-06 28.8 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thermopsin PF05317.11 NODE_72923_length_216_cov_2.983425_g64982_i0reverse_frame_2 - 0.016 14.7 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 Thermopsin Usher PF00577.20 NODE_72921_length_216_cov_3.138122_g64980_i0reverse_frame_3 - 3.5e-17 62.5 0.3 3.5e-17 62.5 0.3 1.0 1 0 0 1 1 1 1 Outer membrane usher protein DUF3929 PF13066.6 NODE_72920_length_216_cov_3.138122_g64979_i0reverse_frame_3 - 0.28 11.3 0.6 2 8.5 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3929) TPP_enzyme_M PF00205.22 NODE_72918_length_216_cov_3.149171_g64977_i0forward_frame_2 - 7.2e-07 29.0 0.4 9.1e-07 28.7 0.4 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 NODE_72918_length_216_cov_3.149171_g64977_i0forward_frame_2 - 0.026 14.3 0.1 0.027 14.2 0.1 1.1 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit DUF3199 PF11436.8 NODE_72917_length_216_cov_3.165746_g64976_i0reverse_frame_2 - 0.018 15.1 0.1 0.02 14.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3199) Pox_A32 PF04665.12 NODE_72916_length_216_cov_3.270718_g64975_i0forward_frame_2 - 0.00061 19.3 0.1 0.00064 19.3 0.1 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein Ferlin_C PF16165.5 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_3 - 0.081 12.9 1.6 0.091 12.7 1.6 1.1 1 0 0 1 1 1 0 Ferlin C-terminus CENP-B_dimeris PF09026.10 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_3 - 0.17 12.3 5.2 0.17 12.3 5.2 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain FAM176 PF14851.6 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_3 - 0.94 9.1 3.4 0.96 9.1 3.4 1.1 1 0 0 1 1 1 0 FAM176 family DNA_pol_phi PF04931.13 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_3 - 1.6 6.7 7.9 1.5 6.9 7.9 1.0 1 0 0 1 1 1 0 DNA polymerase phi RRN3 PF05327.11 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_3 - 3.6 6.0 5.1 3.6 6.0 5.1 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 SH PF01445.17 NODE_72915_length_216_cov_3.325967_g64974_i0forward_frame_3 - 0.018 15.0 0.4 0.029 14.3 0.4 1.3 1 0 0 1 1 1 0 Viral small hydrophobic protein DUF2207 PF09972.9 NODE_72915_length_216_cov_3.325967_g64974_i0forward_frame_2 - 0.4 9.4 4.0 0.39 9.4 4.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) E1-E2_ATPase PF00122.20 NODE_72915_length_216_cov_3.325967_g64974_i0forward_frame_2 - 0.74 9.3 1.8 0.77 9.2 1.8 1.1 1 0 0 1 1 1 0 E1-E2 ATPase UL45 PF05473.12 NODE_72915_length_216_cov_3.325967_g64974_i0forward_frame_2 - 0.88 9.2 2.4 0.92 9.1 2.4 1.0 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like Ly49 PF08391.10 NODE_72911_length_216_cov_6.950276_g64970_i0reverse_frame_2 - 2.2 8.7 6.1 2.3 8.6 6.1 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region DUF1156 PF06634.12 NODE_72901_length_216_cov_32.209945_g64960_i0reverse_frame_2 - 6.9e-05 22.9 0.6 8.5e-05 22.6 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1156) AIM3 PF17096.5 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 0.23 12.4 9.2 0.28 12.2 9.2 1.2 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 RNA_polI_A34 PF08208.11 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 0.27 11.3 12.2 0.27 11.3 12.2 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF3824 PF12868.7 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 0.53 10.9 11.2 0.74 10.5 11.2 1.3 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) DUF4834 PF16118.5 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 2.6 9.1 9.1 2.8 9.0 9.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Cytomega_UL84 PF06284.11 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 4.1 5.7 7.9 4.5 5.6 7.9 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein UPF0239 PF06783.11 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 5.3 7.3 10.0 6.8 6.9 10.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Coilin_N PF15862.5 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 7.5 6.4 14.3 7.8 6.3 14.3 1.1 1 0 0 1 1 1 0 Coilin N-terminus DUF1281 PF06924.11 NODE_72897_length_216_cov_35.138122_g64956_i0forward_frame_2 - 0.078 12.5 0.0 0.094 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) BDV_G PF06208.11 NODE_72896_length_216_cov_37.381215_g64955_i0forward_frame_2 - 0.099 11.8 0.0 0.099 11.8 0.0 1.0 1 0 0 1 1 1 0 Borna disease virus G protein Ank_4 PF13637.6 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 3.3e-09 37.1 0.1 2.5e-05 24.7 0.0 1.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 6.2e-08 32.8 0.0 7.9e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 0.00041 20.9 0.0 0.0005 20.6 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 0.0034 17.7 0.0 0.0058 17.0 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeat Ank PF00023.30 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 0.0087 16.5 0.0 0.017 15.6 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat POT1 PF02765.17 NODE_72888_length_216_cov_48.729282_g64947_i0reverse_frame_3 - 0.028 14.3 0.2 0.034 14.0 0.2 1.1 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 Dynein_C PF18199.1 NODE_72886_length_216_cov_48.961326_g64945_i0reverse_frame_2 - 0.0072 15.6 0.0 0.0076 15.5 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain Vhr1 PF04001.13 NODE_72883_length_216_cov_52.392265_g64942_i0reverse_frame_2 - 0.016 15.5 0.2 0.017 15.4 0.2 1.1 1 0 0 1 1 1 0 Transcription factor Vhr1 DevR PF01905.16 NODE_72883_length_216_cov_52.392265_g64942_i0forward_frame_2 - 0.17 11.0 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated negative auto-regulator DevR/Csa2 Prp18 PF02840.15 NODE_72882_length_216_cov_53.016575_g64941_i0forward_frame_3 - 2.1e-20 73.2 0.1 2.6e-20 72.9 0.1 1.0 1 0 0 1 1 1 1 Prp18 domain Pectinesterase PF01095.19 NODE_72881_length_216_cov_53.320442_g64940_i0reverse_frame_3 - 0.052 12.3 1.0 0.059 12.1 1.0 1.1 1 0 0 1 1 1 0 Pectinesterase LuxC PF05893.14 NODE_72877_length_216_cov_56.696133_g64936_i0reverse_frame_3 - 0.34 9.9 0.0 0.36 9.8 0.0 1.0 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) YceG_bac PF14266.6 NODE_72872_length_216_cov_62.911602_g64931_i0reverse_frame_2 - 0.11 11.4 0.0 0.13 11.1 0.0 1.0 1 0 0 1 1 1 0 Putative component of 'biosynthetic module' FYTT PF07078.11 NODE_72870_length_216_cov_66.662983_g64929_i0forward_frame_2 - 0.068 12.5 0.1 0.068 12.5 0.1 1.1 1 0 0 1 1 1 0 Forty-two-three protein zf-GRF PF06839.12 NODE_72865_length_216_cov_75.436464_g64924_i0reverse_frame_3 - 0.079 13.1 0.3 0.11 12.6 0.3 1.2 1 0 0 1 1 1 0 GRF zinc finger DUF678 PF05077.12 NODE_72864_length_216_cov_80.762431_g64923_i0forward_frame_3 - 0.086 13.0 5.2 0.19 11.9 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF678) IpaB_EvcA PF03278.13 NODE_72862_length_216_cov_86.303867_g64921_i0reverse_frame_3 - 0.04 13.6 0.1 0.21 11.3 0.1 1.9 1 1 0 1 1 1 0 IpaB/EvcA family Varsurf_PPLC PF03490.13 NODE_72859_length_216_cov_89.132597_g64918_i0forward_frame_2 - 0.01 15.7 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C MID_MedPIWI PF18296.1 NODE_72859_length_216_cov_89.132597_g64918_i0forward_frame_2 - 0.064 13.0 0.2 0.073 12.9 0.2 1.0 1 0 0 1 1 1 0 MID domain of medPIWI Ribosomal_L15e PF00827.17 NODE_72857_length_216_cov_96.237569_g64916_i0forward_frame_2 - 1.6e-08 34.5 2.7 2.8e-08 33.7 2.7 1.3 1 0 0 1 1 1 1 Ribosomal L15 NT-C2 PF10358.9 NODE_72856_length_216_cov_115.066298_g64915_i0reverse_frame_3 - 0.018 14.8 0.6 0.021 14.5 0.6 1.1 1 0 0 1 1 1 0 N-terminal C2 in EEIG1 and EHBP1 proteins DUF4763 PF15960.5 NODE_72856_length_216_cov_115.066298_g64915_i0forward_frame_2 - 0.23 10.7 0.1 0.27 10.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Thioredoxin_6 PF13848.6 NODE_72852_length_216_cov_132.342541_g64911_i0reverse_frame_2 - 0.044 13.7 0.0 0.048 13.6 0.0 1.0 1 0 0 1 1 1 0 Thioredoxin-like domain FYVE PF01363.21 NODE_72852_length_216_cov_132.342541_g64911_i0forward_frame_2 - 0.018 15.2 0.2 0.018 15.2 0.2 1.1 1 0 0 1 1 1 0 FYVE zinc finger PAS_11 PF14598.6 NODE_72849_length_216_cov_145.348066_g64908_i0reverse_frame_2 - 0.07 13.3 0.5 0.079 13.1 0.5 1.0 1 0 0 1 1 1 0 PAS domain SR-25 PF10500.9 NODE_72844_length_216_cov_181.220994_g64903_i0forward_frame_2 - 0.51 9.9 10.6 0.57 9.7 10.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein PSII PF00421.19 NODE_72843_length_216_cov_183.270718_g64902_i0reverse_frame_3 - 3.7e-05 22.6 0.0 4.6e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Photosystem II protein SLATT_2 PF18183.1 NODE_72841_length_216_cov_223.497238_g64900_i0reverse_frame_3 - 0.067 13.0 0.1 0.099 12.4 0.1 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 2 NinE PF05322.11 NODE_72838_length_216_cov_282.243094_g64897_i0reverse_frame_3 - 0.015 15.1 0.7 0.02 14.8 0.7 1.2 1 0 0 1 1 1 0 NINE Protein APC_u5 PF16630.5 NODE_72838_length_216_cov_282.243094_g64897_i0reverse_frame_2 - 0.0022 19.0 0.7 0.0024 18.9 0.7 1.1 1 0 0 1 1 1 1 Unstructured region on APC between 1st and 2nd catenin-bdg motifs DUF5553 PF17707.1 NODE_72837_length_216_cov_282.309392_g64896_i0reverse_frame_3 - 0.026 14.0 0.2 0.027 13.9 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5553) zf-C2H2 PF00096.26 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 2.2e-06 27.8 2.1 2.2e-06 27.8 2.1 2.2 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.00088 19.9 0.9 0.00088 19.9 0.9 2.2 3 0 0 3 3 3 1 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.0032 17.8 4.2 0.02 15.3 0.7 2.2 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_jaz PF12171.8 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.0045 17.2 3.3 0.0045 17.2 3.3 2.4 2 1 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.0051 17.2 3.0 0.0071 16.7 0.7 2.3 2 0 0 2 2 2 1 Zinc-finger of C2H2 type FOXP-CC PF16159.5 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.0053 17.3 0.7 0.0063 17.1 0.4 1.4 1 1 0 1 1 1 1 FOXP coiled-coil domain Actin_micro PF17003.5 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.017 14.3 1.9 0.017 14.3 1.9 1.1 1 0 0 1 1 1 0 Putative actin-like family zf-LYAR PF08790.11 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.082 12.8 0.3 0.14 12.0 0.3 1.4 1 0 0 1 1 1 0 LYAR-type C2HC zinc finger Zn-ribbon_8 PF09723.10 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.083 13.0 0.3 0.12 12.6 0.3 1.3 1 0 0 1 1 1 0 Zinc ribbon domain PPDFL PF15060.6 NODE_72829_length_216_cov_595.370166_g64888_i0reverse_frame_2 - 0.077 13.5 0.0 0.085 13.4 0.0 1.1 1 0 0 1 1 1 0 Differentiation and proliferation regulator Sortilin-Vps10 PF15902.5 NODE_72827_length_216_cov_1262.856354_g64886_i0forward_frame_3 - 0.065 12.0 1.2 0.077 11.8 1.2 1.0 1 0 0 1 1 1 0 Sortilin, neurotensin receptor 3, Asp_Arg_Hydrox PF05118.15 NODE_72826_length_216_cov_85293.712707_g64885_i0reverse_frame_2 - 0.11 12.3 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase DUF4187 PF13821.6 ORF99714 - 0.027 14.2 1.1 0.038 13.8 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) DUF1039 PF06287.11 ORF9964 - 0.013 15.9 0.1 0.02 15.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1039) Adaptin_N PF01602.20 ORF99509 - 5.4e-05 21.9 0.0 6.5e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 Adaptin N terminal region HEAT PF02985.22 ORF99118 - 0.0016 18.6 0.0 0.6 10.5 0.0 2.2 2 0 0 2 2 2 2 HEAT repeat HEAT_2 PF13646.6 ORF99118 - 0.0028 18.0 0.0 0.0035 17.7 0.0 1.1 1 0 0 1 1 1 1 HEAT repeats KELK PF15796.5 ORF98984 - 0.0024 18.3 8.1 0.0025 18.2 8.1 1.0 1 0 0 1 1 1 1 KELK-motif containing domain of MRCK Ser/Thr protein kinase TBCA PF02970.16 ORF98984 - 0.0063 16.8 5.6 0.0079 16.5 5.6 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A APG6_N PF17675.1 ORF98984 - 0.0082 16.7 8.1 0.0095 16.5 8.1 1.0 1 0 0 1 1 1 1 Apg6 coiled-coil region Shugoshin_N PF07558.11 ORF98984 - 0.0094 15.8 2.7 2 8.4 0.2 2.4 2 0 0 2 2 2 2 Shugoshin N-terminal coiled-coil region Ax_dynein_light PF10211.9 ORF98984 - 0.01 15.8 7.9 0.011 15.7 7.9 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain ZapB PF06005.12 ORF98984 - 0.32 11.5 9.9 1.6 9.2 9.9 1.9 1 1 0 1 1 1 0 Cell division protein ZapB Remorin_N PF03766.13 ORF98786 - 0.14 12.2 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Remorin, N-terminal region Oxygenase-NA PF09859.9 ORF98460 - 1.7e-07 30.9 0.2 2.2e-07 30.6 0.2 1.1 1 0 0 1 1 1 1 Oxygenase, catalysing oxidative methylation of damaged DNA 2OG-FeII_Oxy_3 PF13640.6 ORF98460 - 0.00062 20.6 0.0 0.00068 20.5 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily mCpol PF18182.1 ORF98460 - 0.057 13.8 0.0 0.063 13.6 0.0 1.1 1 0 0 1 1 1 0 minimal CRISPR polymerase domain MORN PF02493.20 ORF98431 - 2.1e-11 43.0 7.2 3.6e-06 26.5 2.1 2.5 2 0 0 2 2 2 2 MORN repeat Ecm33 PF12454.8 ORF98379 - 0.093 12.9 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 GPI-anchored cell wall organization protein ROK PF00480.20 ORF98198 - 0.00078 19.0 0.0 0.00087 18.8 0.0 1.1 1 0 0 1 1 1 1 ROK family Fe-S_biosyn PF01521.20 ORF98048 - 2.3e-11 43.8 0.2 2.5e-11 43.7 0.2 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis Gemini_AC4_5_2 PF08464.10 ORF97350 - 0.055 13.4 0.0 0.088 12.8 0.0 1.4 1 0 0 1 1 1 0 Geminivirus AC4/5 conserved region Neurexophilin PF06312.12 ORF97248 - 0.042 13.3 0.3 0.045 13.2 0.3 1.1 1 0 0 1 1 1 0 Neurexophilin DUF1097 PF06496.11 ORF97103 - 0.033 14.3 0.3 0.033 14.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1097) Yopt PF09467.10 ORF96439 - 0.24 11.5 0.1 0.42 10.7 0.1 1.5 1 1 1 2 2 2 0 Hypothetical protein Yopt Ion_trans PF00520.31 ORF96325 - 7.4e-07 28.6 0.5 8.1e-07 28.5 0.5 1.0 1 0 0 1 1 1 1 Ion transport protein NPCC PF08058.11 ORF96325 - 0.087 12.9 0.7 0.092 12.8 0.7 1.1 1 0 0 1 1 1 0 Nuclear pore complex component ApoO PF09769.9 ORF96128 - 0.099 12.6 0.1 0.24 11.4 0.0 1.6 1 1 1 2 2 2 0 Apolipoprotein O AA_permease PF00324.21 ORF95951 - 0.041 12.5 0.1 0.048 12.3 0.1 1.0 1 0 0 1 1 1 0 Amino acid permease GlnE PF03710.15 ORF95632 - 0.14 11.6 0.3 0.14 11.5 0.3 1.0 1 0 0 1 1 1 0 Glutamate-ammonia ligase adenylyltransferase Herpes_V23 PF01802.17 ORF95311 - 0.087 12.2 0.0 0.094 12.1 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus VP23 like capsid protein DUF4209 PF13910.6 ORF95311 - 0.15 12.3 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4209) DUF3149 PF11346.8 ORF94896 - 0.15 11.7 0.2 0.24 11.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) DUF5442 PF17514.2 ORF94742 - 0.039 14.1 0.5 0.15 12.2 0.2 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5442) TAP42 PF04177.12 ORF93896 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family Autophagy_act_C PF03987.15 ORF93733 - 0.15 12.7 0.9 0.35 11.5 0.6 1.7 2 0 0 2 2 2 0 Autophagocytosis associated protein, active-site domain DUF3922 PF13059.6 ORF93085 - 0.072 13.5 0.0 0.087 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3992) DUF3139 PF11337.8 ORF93059 - 0.043 14.5 0.3 0.06 14.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) Colicin_E5 PF12106.8 ORF93059 - 0.11 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Colicin E5 ribonuclease domain GIDE PF12483.8 ORF92596 - 0.036 13.4 0.1 0.04 13.3 0.1 1.1 1 0 0 1 1 1 0 E3 Ubiquitin ligase Hexapep PF00132.24 ORF9227 - 0.0016 18.1 2.1 0.38 10.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF9227 - 0.0044 16.7 2.2 0.0071 16.1 2.2 1.4 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 ORF92203 - 0.0016 18.1 2.1 0.38 10.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF92203 - 0.0044 16.7 2.2 0.0071 16.1 2.2 1.4 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase Sulfate_transp PF00916.20 ORF91911 - 0.015 14.0 0.0 0.017 13.9 0.0 1.0 1 0 0 1 1 1 0 Sulfate permease family DUF2152 PF10222.9 ORF91808 - 0.033 12.6 0.0 0.034 12.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2152) Levi_coat PF01819.17 ORF91720 - 0.088 12.8 0.1 0.092 12.8 0.1 1.0 1 0 0 1 1 1 0 Levivirus coat protein RIG-I_C PF18119.1 ORF91480 - 0.017 15.1 0.0 0.019 15.0 0.0 1.0 1 0 0 1 1 1 0 RIG-I receptor C-terminal domain TarH PF02203.15 ORF91456 - 0.0074 16.2 0.0 0.0078 16.2 0.0 1.1 1 0 0 1 1 1 1 Tar ligand binding domain homologue Pkinase PF00069.25 ORF91348 - 4.5e-10 39.3 0.0 4.9e-10 39.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF91348 - 5.4e-07 29.2 0.1 5.5e-07 29.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase YqgC PF17430.2 ORF90978 - 1.5e-39 133.9 2.5 2e-39 133.4 2.5 1.2 1 0 0 1 1 1 1 Uncharacterized YqgC-like DUF5617 PF18493.1 ORF90547 - 0.019 15.1 1.2 0.023 14.8 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) Se-cys_synth_N PF12390.8 ORF90296 - 0.0087 16.3 1.6 0.013 15.7 1.6 1.5 1 1 0 1 1 1 1 Selenocysteine synthase N terminal MtrD PF04207.12 ORF89976 - 0.12 12.1 0.3 0.13 11.9 0.3 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit D LPAM_1 PF08139.12 ORF89850 - 0.024 15.1 2.2 0.055 14.0 2.2 1.6 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site EOS1 PF12326.8 ORF8970 - 0.093 12.7 0.5 0.1 12.6 0.5 1.0 1 0 0 1 1 1 0 N-glycosylation protein Peptidase_M11 PF05548.11 ORF89075 - 0.067 12.3 0.0 0.068 12.3 0.0 1.0 1 0 0 1 1 1 0 Gametolysin peptidase M11 Levi_coat PF01819.17 ORF87687 - 0.088 12.8 0.1 0.092 12.8 0.1 1.0 1 0 0 1 1 1 0 Levivirus coat protein ATPase_gene1 PF09527.10 ORF87568 - 0.0022 18.1 1.3 0.0031 17.6 1.3 1.2 1 0 0 1 1 1 1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter SpoVAB PF13782.6 ORF87568 - 0.013 15.8 0.0 0.013 15.8 0.0 1.1 1 0 0 1 1 1 0 Stage V sporulation protein AB TPK_B1_binding PF04265.14 ORF87387 - 0.022 14.4 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Ntox5 PF15543.6 ORF87011 - 0.037 13.9 0.1 0.04 13.8 0.1 1.1 1 0 0 1 1 1 0 Bacterial toxin 5 DUF2492 PF10678.9 ORF86732 - 0.11 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) Ank_4 PF13637.6 ORF86536 - 0.013 16.0 0.1 0.018 15.6 0.1 1.2 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 ORF86536 - 0.014 15.8 0.0 0.076 13.5 0.1 1.9 2 0 0 2 2 2 0 Ankyrin repeat Ank_2 PF12796.7 ORF86536 - 0.022 15.3 0.1 0.025 15.2 0.1 1.1 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF86536 - 0.059 13.7 0.0 0.091 13.1 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) SPT_ssu-like PF11779.8 ORF86487 - 0.016 14.8 1.8 0.025 14.2 1.8 1.3 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like Tnp_22_trimer PF17489.2 ORF86258 - 0.0094 15.9 0.7 0.016 15.2 0.7 1.4 1 0 0 1 1 1 1 L1 transposable element trimerization domain Abhydrolase_6 PF12697.7 ORF85590 - 0.00096 19.8 0.1 0.0012 19.5 0.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ribosomal_S21 PF01165.20 ORF85510 - 6e-22 77.1 6.5 6e-22 77.1 6.5 1.9 1 1 1 2 2 2 1 Ribosomal protein S21 Ras PF00071.22 ORF85256 - 2.7e-20 72.6 0.1 3e-20 72.5 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF85256 - 2e-16 60.3 0.0 2.2e-16 60.1 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF85256 - 9.1e-06 25.2 0.0 9.9e-06 25.1 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF85256 - 0.0063 15.9 0.0 0.007 15.7 0.0 1.0 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF85256 - 0.054 13.6 0.0 0.069 13.2 0.0 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF85256 - 0.14 11.7 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_33 PF13671.6 ORF85256 - 0.22 11.7 0.0 0.24 11.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain Ntox5 PF15543.6 ORF85126 - 0.037 13.9 0.1 0.04 13.8 0.1 1.1 1 0 0 1 1 1 0 Bacterial toxin 5 Tail_VII PF17091.5 ORF84176 - 0.052 13.4 0.3 0.052 13.4 0.3 1.8 2 0 0 2 2 2 0 Inovirus G7P protein DUF5056 PF16479.5 ORF83680 - 0.075 13.3 0.6 0.11 12.7 0.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5056) SPT_ssu-like PF11779.8 ORF83087 - 0.016 14.8 1.8 0.025 14.2 1.8 1.3 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like Chitin_synth_1 PF01644.17 ORF82301 - 0.00024 21.1 0.0 0.00029 20.9 0.0 1.2 1 0 0 1 1 1 1 Chitin synthase MORN PF02493.20 ORF81227 - 7.4e-20 69.6 18.4 3.3e-08 33.0 1.0 4.0 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 ORF81227 - 0.00034 20.2 0.9 0.31 10.8 0.0 2.8 2 1 0 2 2 2 2 Jumonji domain-containing protein 2A Tudor domain DUF3048_C PF17479.2 ORF81227 - 0.22 11.9 5.2 1 9.8 4.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Acetyltransf_10 PF13673.7 ORF80426 - 7.6e-13 48.5 0.0 8.7e-13 48.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF80426 - 1.2e-06 28.8 0.0 1.7e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF80426 - 0.0016 18.6 0.0 0.0023 18.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Esterase PF00756.20 ORF80340 - 0.00061 19.5 0.0 0.0007 19.3 0.0 1.1 1 0 0 1 1 1 1 Putative esterase MFP2b PF12150.8 ORF80340 - 0.022 14.1 0.1 0.029 13.7 0.1 1.1 1 0 0 1 1 1 0 Cytosolic motility protein RNase_PH_C PF03725.15 ORF80149 - 0.018 15.0 0.2 0.02 14.9 0.2 1.1 1 0 0 1 1 1 0 3' exoribonuclease family, domain 2 Peptidase_C65 PF10275.9 ORF79729 - 0.21 11.0 0.0 0.24 10.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase C65 Otubain TMEM208_SND2 PF05620.11 ORF79466 - 0.048 13.4 2.1 0.053 13.3 2.1 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 MAP65_ASE1 PF03999.12 ORF78896 - 7.4 5.1 7.6 8.2 5.0 7.6 1.0 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Thioredoxin_16 PF18569.1 ORF78203 - 0.038 14.1 0.0 0.041 14.0 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Ery_res_leader2 PF08057.11 ORF78203 - 0.058 13.8 0.2 0.21 12.1 0.0 2.0 2 0 0 2 2 2 0 Erythromycin resistance leader peptide SMK-1 PF04802.15 ORF78103 - 0.13 12.1 4.6 0.14 11.9 4.6 1.1 1 0 0 1 1 1 0 Component of IIS longevity pathway SMK-1 Hexapep PF00132.24 ORF78060 - 0.0016 18.1 2.1 0.38 10.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF78060 - 0.0044 16.7 2.2 0.0071 16.1 2.2 1.4 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase PSI_integrin PF17205.3 ORF77548 - 0.049 13.4 0.1 0.059 13.1 0.1 1.1 1 0 0 1 1 1 0 Integrin plexin domain APG12 PF04110.13 ORF77501 - 0.064 13.7 0.3 0.078 13.4 0.3 1.1 1 0 0 1 1 1 0 Ubiquitin-like autophagy protein Apg12 DUF5582 PF17819.1 ORF76381 - 0.019 15.4 0.0 0.022 15.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5582) DUF5586 PF17824.1 ORF76381 - 0.044 12.9 0.0 0.044 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5586) Dpy-30 PF05186.13 ORF76381 - 0.046 13.4 0.1 0.073 12.8 0.1 1.4 1 1 0 1 1 1 0 Dpy-30 motif HSCB_C PF07743.13 ORF76182 - 4.8e-10 39.8 4.8 5.4e-10 39.6 4.8 1.0 1 0 0 1 1 1 1 HSCB C-terminal oligomerisation domain Apt1 PF10351.9 ORF76182 - 0.02 13.8 1.1 0.022 13.6 1.1 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Pkinase PF00069.25 ORF75728 - 8.1e-16 58.2 0.2 8.1e-16 58.2 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF75728 - 1.5e-05 24.4 0.0 1.6e-05 24.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF75728 - 0.00036 19.9 0.1 0.00041 19.8 0.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF75728 - 0.0019 18.2 0.0 0.0019 18.2 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF75728 - 0.015 14.9 0.1 0.016 14.8 0.1 1.1 1 0 0 1 1 1 0 RIO1 family Choline_kinase PF01633.20 ORF75728 - 0.045 13.3 0.0 0.05 13.2 0.0 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase Pox_ser-thr_kin PF05445.11 ORF75728 - 0.054 12.5 0.0 0.054 12.5 0.0 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase DUF5388 PF17363.2 ORF75239 - 0.015 15.5 0.0 0.018 15.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5388) Chitin_synth_1 PF01644.17 ORF75211 - 0.00024 21.1 0.0 0.00029 20.9 0.0 1.2 1 0 0 1 1 1 1 Chitin synthase Albumin_I PF08027.11 ORF75202 - 0.015 14.9 0.2 0.033 13.8 0.2 1.5 1 0 0 1 1 1 0 Albumin I chain b EF-hand_1 PF00036.32 ORF7504 - 6.9e-16 56.5 8.1 3.2e-08 32.6 1.6 2.1 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF7504 - 2.7e-15 55.9 3.7 2.5e-11 43.2 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF7504 - 3.3e-15 56.3 0.8 3.7e-15 56.1 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF7504 - 6.5e-13 47.5 3.6 1.4e-06 27.8 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF7504 - 6.5e-07 28.6 12.0 0.00042 19.7 1.6 2.8 2 1 1 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF7504 - 0.00026 21.3 0.3 0.00028 21.2 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF7504 - 0.0063 16.7 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Dockerin type I domain EF-hand_4 PF12763.7 ORF7504 - 0.012 15.6 0.3 0.016 15.1 0.3 1.2 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF1456 PF07308.13 ORF7504 - 0.021 15.2 0.3 0.077 13.3 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1456) PMBR PF09373.10 ORF7504 - 0.042 14.0 0.0 5.1 7.4 0.0 2.6 3 0 0 3 3 3 0 Pseudomurein-binding repeat EF-hand_9 PF14658.6 ORF7504 - 0.046 14.1 0.0 0.053 13.9 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain Nnf1 PF03980.14 ORF7504 - 0.11 12.9 0.1 0.14 12.5 0.1 1.3 1 0 0 1 1 1 0 Nnf1 PSI_integrin PF17205.3 ORF74649 - 0.049 13.4 0.1 0.059 13.1 0.1 1.1 1 0 0 1 1 1 0 Integrin plexin domain KA1 PF02149.19 ORF74110 - 5.5e-05 22.9 0.5 0.0063 16.3 0.3 2.7 2 1 0 2 2 2 2 Kinase associated domain 1 Got1 PF04178.12 ORF73637 - 3.4e-17 62.9 11.1 3.6e-17 62.8 11.1 1.0 1 0 0 1 1 1 1 Got1/Sft2-like family DUF4149 PF13664.6 ORF73637 - 0.036 14.4 3.4 0.044 14.1 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4149) DUF2157 PF09925.9 ORF73637 - 0.043 13.6 0.5 0.053 13.3 0.5 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF3671 PF12420.8 ORF73637 - 1.1 9.3 8.6 0.71 10.0 2.5 2.0 1 1 1 2 2 2 0 Protein of unknown function ARID PF01388.21 ORF7333 - 0.11 13.1 0.0 9.4 7.0 0.0 2.0 1 1 1 2 2 2 0 ARID/BRIGHT DNA binding domain RRM_1 PF00076.22 ORF73201 - 0.0062 16.3 0.0 0.0075 16.1 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Attachment_P66 PF11263.8 ORF73036 - 0.1 11.8 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi attachment protein P66 Requiem_N PF14051.6 ORF73008 - 1.5 9.0 7.2 6.2 7.1 0.9 2.4 1 1 1 2 2 2 0 N-terminal domain of DPF2/REQ. UPF0228 PF05727.11 ORF72925 - 0.0094 15.8 1.2 0.01 15.7 1.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) DUF3530 PF12048.8 ORF7258 - 0.076 12.4 0.4 0.077 12.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) GLE1 PF07817.13 ORF72388 - 0.1 11.8 0.1 0.1 11.8 0.1 1.1 1 0 0 1 1 1 0 GLE1-like protein L71 PF02448.15 ORF72249 - 0.11 12.9 1.6 0.14 12.6 1.6 1.2 1 0 0 1 1 1 0 L71 family Exo_endo_phos PF03372.23 ORF72084 - 0.099 12.1 0.1 0.11 12.0 0.1 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Hexapep PF00132.24 ORF7205 - 0.0016 18.1 2.1 0.38 10.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF7205 - 0.0044 16.7 2.2 0.0071 16.1 2.2 1.4 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase Peptidase_M16_M PF16187.5 ORF70624 - 0.026 13.8 0.3 0.027 13.8 0.3 1.0 1 0 0 1 1 1 0 Middle or third domain of peptidase_M16 ATP-synt_B PF00430.18 ORF70624 - 0.029 14.4 0.2 0.035 14.2 0.2 1.1 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) Response_reg PF00072.24 ORF70555 - 9.8e-13 48.3 0.1 1.1e-12 48.1 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain PqqA PF08042.11 ORF70050 - 0.27 11.3 1.1 1.9 8.7 0.5 2.1 2 0 0 2 2 2 0 PqqA family MFS_2 PF13347.6 ORF69682 - 9.3e-14 50.8 1.4 9.9e-14 50.7 1.4 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein TraG-D_C PF12696.7 ORF69419 - 0.12 12.4 0.3 0.32 11.0 0.0 1.7 2 0 0 2 2 2 0 TraM recognition site of TraD and TraG DUF5560 PF17715.1 ORF69248 - 0.27 10.6 2.0 0.32 10.4 2.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5560) DUF910 PF06014.11 ORF68986 - 0.03 14.3 0.2 0.078 13.0 0.1 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF910) Tox-WTIP PF15654.6 ORF68740 - 0.37 11.2 1.4 0.55 10.7 1.4 1.2 1 0 0 1 1 1 0 Toxin with a conserved tryptophan and TIP tripeptide motif YukD PF08817.10 ORF68579 - 0.016 15.9 0.0 0.021 15.5 0.0 1.3 1 1 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD ASTN_2_hairpin PF18577.1 ORF68197 - 0.11 12.7 0.2 0.18 11.9 0.2 1.3 1 0 0 1 1 1 0 Astrotactin-2 C-terminal beta-hairpin domain EF-hand_1 PF00036.32 ORF67554 - 8.2e-18 62.6 1.4 3.7e-08 32.4 0.2 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF67554 - 1.8e-15 57.1 0.8 2e-15 57.0 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF67554 - 1.1e-14 53.2 1.2 1.3e-06 27.6 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF67554 - 5.1e-14 50.9 0.6 8.2e-08 31.6 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF67554 - 3.8e-13 49.1 2.6 6.1e-08 32.4 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF67554 - 0.00022 21.5 0.1 0.00029 21.1 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF67554 - 0.00049 20.4 0.3 0.00053 20.3 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF67554 - 0.0024 18.7 0.0 0.0028 18.5 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF67554 - 0.013 15.5 0.4 0.026 14.5 0.4 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 ORF67554 - 0.033 14.4 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 ORF67554 - 0.066 11.7 0.0 0.074 11.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 ORF67554 - 0.075 12.9 0.6 0.45 10.4 0.3 2.1 2 0 0 2 2 2 0 EF hand Rimk_N PF18030.1 ORF67242 - 0.19 12.1 0.0 0.23 11.9 0.0 1.1 1 0 0 1 1 1 0 RimK PreATP-grasp domain DUF4390 PF14334.6 ORF67175 - 0.18 11.2 0.0 0.23 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4390) DUF465 PF04325.13 ORF67016 - 0.026 14.6 0.6 0.026 14.6 0.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF465) EIF_2_alpha PF07541.12 ORF67016 - 0.054 13.6 1.0 0.11 12.5 1.0 1.6 1 1 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit V-ATPase_H_N PF03224.14 ORF66987 - 0.0082 15.5 0.2 0.0088 15.4 0.2 1.0 1 0 0 1 1 1 1 V-ATPase subunit H DHHC PF01529.20 ORF66987 - 0.021 14.9 1.5 0.067 13.3 0.2 1.9 2 0 0 2 2 2 0 DHHC palmitoyltransferase Penaeidin PF05927.11 ORF66987 - 0.044 14.5 0.0 0.049 14.4 0.0 1.1 1 0 0 1 1 1 0 Penaeidin zf-C2HCIx2C PF10782.9 ORF66604 - 0.14 12.1 0.2 0.22 11.5 0.2 1.3 1 0 0 1 1 1 0 Zinc-finger ARTD15_N PF18084.1 ORF66603 - 0.052 13.8 0.0 0.061 13.6 0.0 1.1 1 0 0 1 1 1 0 ARTD15 N-terminal domain TAP42 PF04177.12 ORF66500 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family DUF4705 PF15788.5 ORF66432 - 0.062 13.5 0.4 0.11 12.7 0.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4705) DUF3849 PF12960.7 ORF66432 - 0.16 12.0 0.0 0.18 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3849) EF-hand_1 PF00036.32 ORF6525 - 8.2e-18 62.6 1.4 3.7e-08 32.4 0.2 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF6525 - 1.8e-15 57.1 0.8 2e-15 57.0 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF6525 - 1.1e-14 53.2 1.2 1.3e-06 27.6 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF6525 - 5.1e-14 50.9 0.6 8.2e-08 31.6 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF6525 - 3.8e-13 49.1 2.6 6.1e-08 32.4 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF6525 - 0.00022 21.5 0.1 0.00029 21.1 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF6525 - 0.00049 20.4 0.3 0.00053 20.3 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF6525 - 0.0024 18.7 0.0 0.0028 18.5 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF6525 - 0.013 15.5 0.4 0.026 14.5 0.4 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 ORF6525 - 0.033 14.4 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 ORF6525 - 0.066 11.7 0.0 0.074 11.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 ORF6525 - 0.075 12.9 0.6 0.45 10.4 0.3 2.1 2 0 0 2 2 2 0 EF hand zf-CCHC_6 PF15288.6 ORF65086 - 0.022 14.6 2.7 0.04 13.8 1.5 1.9 1 1 1 2 2 2 0 Zinc knuckle Nab6_mRNP_bdg PF10567.9 ORF64931 - 0.039 13.5 0.3 0.039 13.5 0.3 1.0 1 0 0 1 1 1 0 RNA-recognition motif # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks347.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks347.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks347.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks347.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1420 PF07220.11 ORF64176 - 0.027 13.1 0.1 0.03 12.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1420) DUF5351 PF17302.2 ORF63258 - 0.028 14.6 0.1 0.049 13.8 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5351) Ala_racemase_N PF01168.20 ORF62627 - 1.3e-06 28.3 0.0 1.3e-06 28.3 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain TEX12 PF15219.6 ORF62282 - 0.0089 16.3 0.1 0.014 15.7 0.1 1.3 1 1 0 1 1 1 1 Testis-expressed 12 XLF PF09302.11 ORF62282 - 0.029 14.6 0.8 0.031 14.5 0.8 1.0 1 0 0 1 1 1 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Phage_min_cap2 PF06152.11 ORF62282 - 0.063 12.2 0.3 0.063 12.2 0.3 1.0 1 0 0 1 1 1 0 Phage minor capsid protein 2 Hexapep PF00132.24 ORF62114 - 0.0016 18.1 2.1 0.38 10.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF62114 - 0.0044 16.7 2.2 0.0071 16.1 2.2 1.4 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase PAS_2 PF08446.11 ORF61786 - 0.047 14.4 0.0 0.05 14.3 0.0 1.1 1 0 0 1 1 1 0 PAS fold Deltaretro_Tax PF05599.11 ORF61575 - 0.019 15.5 2.4 0.02 15.4 2.0 1.3 1 1 0 1 1 1 0 Deltaretrovirus Tax protein Keratin_B2_2 PF13885.6 ORF61575 - 0.13 12.3 5.0 0.33 10.9 5.0 1.9 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein DHHC PF01529.20 ORF61207 - 5.6e-27 94.5 10.3 6.3e-27 94.3 10.3 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase FANCA_interact PF15751.5 ORF61130 - 0.03 14.8 0.5 0.041 14.4 0.5 1.3 1 1 0 1 1 1 0 FAAP20 FANCA interaction domain Ribosomal_L34 PF00468.17 ORF60992 - 0.057 13.4 0.1 0.12 12.3 0.0 1.6 2 0 0 2 2 2 0 Ribosomal protein L34 Mito_carr PF00153.27 ORF60670 - 8.1e-09 35.3 1.5 9e-09 35.1 1.5 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein HTH_AraC PF00165.23 ORF60670 - 0.037 14.1 1.3 0.057 13.5 1.3 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family NOG1_N PF17835.1 ORF60569 - 1e-11 45.1 0.5 1.1e-11 44.9 0.5 1.0 1 0 0 1 1 1 1 NOG1 N-terminal helical domain Skp1 PF01466.19 ORF60569 - 0.095 12.8 0.3 0.18 11.9 0.1 1.7 2 0 0 2 2 2 0 Skp1 family, dimerisation domain MORN PF02493.20 ORF60441 - 1.9e-10 40.0 5.3 3.9e-06 26.4 0.6 2.6 3 0 0 3 3 3 2 MORN repeat DnaJ_CXXCXGXG PF00684.19 ORF60349 - 0.055 13.8 0.3 0.07 13.5 0.3 1.1 1 0 0 1 1 1 0 DnaJ central domain DUF1147 PF06615.11 ORF60349 - 0.17 12.0 2.0 0.38 10.8 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1147) Epiglycanin_TR PF05647.11 ORF5972 - 0.15 12.0 1.7 0.73 9.8 0.1 2.0 2 0 0 2 2 2 0 Tandem-repeating region of mucin, epiglycanin-like CD36 PF01130.21 ORF59373 - 0.042 12.4 0.4 0.046 12.2 0.4 1.0 1 0 0 1 1 1 0 CD36 family OAD_gamma PF04277.13 ORF58792 - 0.0044 17.6 3.2 0.0044 17.6 3.2 1.4 1 1 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain DUF4995 PF16386.5 ORF58792 - 0.11 12.5 0.6 0.13 12.2 0.6 1.4 1 1 0 1 1 1 0 Domain of unknown function CcmF_C PF16327.5 ORF58792 - 0.28 10.4 5.6 0.32 10.2 5.6 1.0 1 0 0 1 1 1 0 Cytochrome c-type biogenesis protein CcmF C-terminal HemY_N PF07219.13 ORF58792 - 1.4 9.2 7.2 2.1 8.6 7.2 1.4 1 1 0 1 1 1 0 HemY protein N-terminus Shisa PF13908.6 ORF58792 - 1.7 8.8 5.7 1.7 8.8 5.7 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Kelch_3 PF13415.6 ORF58479 - 0.00011 22.4 0.3 0.00069 19.8 0.2 2.0 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF58479 - 0.00015 21.6 0.5 0.92 9.6 0.0 2.9 2 1 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 ORF58479 - 0.00026 20.8 0.5 0.0033 17.3 0.5 2.0 2 0 0 2 2 2 1 Kelch motif Kelch_1 PF01344.25 ORF58479 - 0.044 13.4 0.6 0.33 10.6 0.5 2.0 2 0 0 2 2 2 0 Kelch motif Kelch_4 PF13418.6 ORF58479 - 0.095 12.7 0.8 0.42 10.7 0.8 1.8 2 0 0 2 2 2 0 Galactose oxidase, central domain NETI PF14044.6 ORF58017 - 1.7 8.5 3.7 2.9 7.7 0.5 2.2 1 1 1 2 2 2 0 NETI protein DUF2492 PF10678.9 ORF57443 - 0.11 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) PAS_2 PF08446.11 ORF57343 - 0.047 14.4 0.0 0.05 14.3 0.0 1.1 1 0 0 1 1 1 0 PAS fold DUF600 PF04634.12 ORF57291 - 0.02 14.9 0.1 0.033 14.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function, DUF600 DUF761 PF05553.11 ORF56846 - 0.15 11.6 0.7 0.31 10.6 0.7 1.4 1 0 0 1 1 1 0 Cotton fibre expressed protein TPPK_C PF12555.8 ORF56581 - 0.09 12.8 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Thiamine pyrophosphokinase C terminal DIM PF08194.12 ORF56581 - 0.18 12.0 1.8 0.44 10.8 1.8 1.7 1 1 0 1 1 1 0 DIM protein P_proprotein PF01483.20 ORF56273 - 0.076 13.1 0.1 0.15 12.1 0.0 1.5 1 1 0 1 1 1 0 Proprotein convertase P-domain N_formyltrans_C PF18216.1 ORF56017 - 0.081 12.6 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 N-formyltransferase dimerization C-terminal domain DUF4232 PF14016.6 ORF55325 - 0.1 12.8 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4232) XylR_N PF06505.11 ORF54692 - 0.11 12.2 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Activator of aromatic catabolism zf-CGNR PF11706.8 ORF54068 - 0.083 12.8 0.2 0.14 12.1 0.2 1.3 1 0 0 1 1 1 0 CGNR zinc finger DCR PF14047.6 ORF53731 - 0.074 13.3 0.1 0.088 13.0 0.1 1.2 1 0 0 1 1 1 0 Dppa2/4 conserved region Cdc13_OB4_dimer PF18233.1 ORF536 - 0.14 12.3 0.3 0.16 12.1 0.3 1.1 1 0 0 1 1 1 0 Cdc13 OB4 dimerization domain LacAB_rpiB PF02502.18 ORF53560 - 8e-16 58.3 0.6 8.8e-16 58.1 0.6 1.0 1 0 0 1 1 1 1 Ribose/Galactose Isomerase UPF0180 PF03698.13 ORF53560 - 0.053 13.7 0.1 0.07 13.3 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) Calcipressin PF04847.12 ORF52972 - 0.068 12.9 0.1 0.068 12.9 0.1 1.2 1 0 0 1 1 1 0 Calcipressin GIIM PF08388.11 ORF52972 - 0.079 13.0 0.0 0.097 12.7 0.0 1.1 1 0 0 1 1 1 0 Group II intron, maturase-specific domain TAP42 PF04177.12 ORF52728 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family Herpes_LMP2 PF07415.11 ORF52427 - 0.41 9.4 7.6 0.47 9.2 7.6 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein Hexapep PF00132.24 ORF52392 - 0.0016 18.1 2.1 0.38 10.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF52392 - 0.0044 16.7 2.2 0.0071 16.1 2.2 1.4 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase DDE_Tnp_1_6 PF13751.6 ORF52163 - 0.092 13.0 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Transposase DDE domain Hexapep PF00132.24 ORF52050 - 0.0016 18.1 2.1 0.38 10.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF52050 - 0.0044 16.7 2.2 0.0071 16.1 2.2 1.4 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase Oxidored_q5_N PF01059.17 ORF51299 - 0.3 11.2 8.3 0.32 11.1 8.3 1.0 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus PRIMA1 PF16101.5 ORF51216 - 2.7 8.1 5.6 3.2 7.8 5.6 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 TFIIS_C PF01096.18 ORF51146 - 4.7e-06 26.3 8.6 2.2e-05 24.2 8.6 1.8 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) Elf1 PF05129.13 ORF51146 - 0.0027 17.7 0.4 0.0037 17.3 0.4 1.3 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like zf-HIT PF04438.16 ORF51146 - 0.15 11.9 8.4 0.66 9.9 5.4 2.1 2 0 0 2 2 2 0 HIT zinc finger zinc_ribbon_4 PF13717.6 ORF51146 - 0.44 10.5 0.2 0.44 10.5 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.9 ORF51146 - 1.7 8.8 0.0 1.7 8.8 0.0 2.7 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 MORN PF02493.20 ORF51058 - 4.1e-08 32.7 3.3 6e-05 22.7 0.7 2.7 3 0 0 3 3 3 2 MORN repeat Aa_trans PF01490.18 ORF50817 - 0.0036 16.1 1.0 0.0036 16.1 1.0 1.2 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein DUF4334 PF14232.6 ORF50817 - 0.12 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4334) PSI PF01437.25 ORF50296 - 0.013 16.0 3.1 0.018 15.6 3.1 1.3 1 0 0 1 1 1 0 Plexin repeat Hexapep PF00132.24 ORF50235 - 0.0016 18.1 2.1 0.38 10.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF50235 - 0.0044 16.7 2.2 0.0071 16.1 2.2 1.4 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase Flu_C_NS2 PF03555.14 ORF50070 - 0.23 11.7 0.7 8.2 6.7 0.0 2.1 2 0 0 2 2 2 0 Influenza C non-structural protein (NS2) TAP42 PF04177.12 ORF49338 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family Toxin_6 PF05453.12 ORF49188 - 6.2 7.3 8.7 3 8.4 1.5 2.9 2 1 0 2 2 2 0 BmTXKS1/BmP02 toxin family DUF2062 PF09835.9 ORF49094 - 0.035 14.0 0.5 0.039 13.8 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) DUF5538 PF17692.1 ORF48544 - 0.38 10.8 8.5 0.44 10.6 8.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5538) TAP42 PF04177.12 ORF47788 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family DUF5001 PF16392.5 ORF4749 - 0.06 13.3 0.1 0.062 13.2 0.1 1.2 1 0 0 1 1 1 0 Ig-like domain TetR_C_13 PF16925.5 ORF46790 - 0.077 12.9 0.1 0.081 12.9 0.1 1.0 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF1235 PF06822.12 ORF45991 - 0.023 14.0 0.1 0.024 13.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1235) FlbD PF06289.11 ORF45991 - 0.082 12.5 0.1 0.25 11.0 0.0 1.8 1 1 1 2 2 2 0 Flagellar and Swarming motility proteins Ecm33 PF12454.8 ORF45758 - 0.093 12.9 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 GPI-anchored cell wall organization protein IBR PF01485.21 ORF4566 - 0.002 18.3 6.3 0.0029 17.8 6.3 1.5 1 1 0 1 1 1 1 IBR domain, a half RING-finger domain zf-NADH-PPase PF09297.11 ORF4566 - 0.032 13.9 3.0 0.12 12.1 0.0 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-RING_5 PF14634.6 ORF4566 - 0.039 13.9 5.3 0.052 13.5 0.6 2.3 2 1 0 2 2 2 0 zinc-RING finger domain zf-RING_2 PF13639.6 ORF4566 - 0.42 11.0 8.2 1.1 9.7 2.2 2.3 2 1 0 2 2 2 0 Ring finger domain zf_Rg PF17915.1 ORF4566 - 9.3 5.7 10.1 71 2.9 9.5 2.3 1 1 1 2 2 2 0 Reverse gyrase zinc finger TAP42 PF04177.12 ORF45611 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family Ribosomal_L37e PF01907.19 ORF45606 - 0.072 13.3 11.0 0.061 13.5 10.1 1.3 1 1 0 1 1 1 0 Ribosomal protein L37e CENP-N PF05238.13 ORF43670 - 0.1 11.9 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Levi_coat PF01819.17 ORF43034 - 0.088 12.8 0.1 0.092 12.8 0.1 1.0 1 0 0 1 1 1 0 Levivirus coat protein CAF1-p150_N PF15557.6 ORF42301 - 0.098 12.6 0.1 0.098 12.6 0.1 1.1 1 0 0 1 1 1 0 CAF1 complex subunit p150, region binding to PCNA DUF2492 PF10678.9 ORF42024 - 0.11 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) Imm53 PF15580.6 ORF4174 - 0.013 15.2 0.2 0.016 14.9 0.2 1.1 1 0 0 1 1 1 0 Immunity protein 53 DUF3678 PF12435.8 ORF41529 - 0.1 12.0 3.0 0.47 9.9 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3678) TAP42 PF04177.12 ORF41521 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family DUF2759 PF10958.8 ORF41407 - 0.065 13.0 0.1 0.091 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) Nbas_N PF15492.6 ORF41029 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal GIDE PF12483.8 ORF406 - 0.036 13.4 0.1 0.04 13.3 0.1 1.1 1 0 0 1 1 1 0 E3 Ubiquitin ligase EF-hand_1 PF00036.32 ORF40235 - 1.1e-15 55.9 7.8 5.6e-08 31.8 1.4 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF40235 - 5.2e-15 55.7 0.8 5.8e-15 55.5 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF40235 - 8.1e-15 54.4 4.1 5.8e-11 42.1 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF40235 - 8.9e-13 47.1 3.6 1.4e-06 27.8 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF40235 - 2.5e-07 29.9 10.9 0.00022 20.6 1.0 2.8 2 1 1 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF40235 - 0.00027 21.3 0.3 0.00028 21.2 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF40235 - 0.0063 16.7 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Dockerin type I domain DUF1456 PF07308.13 ORF40235 - 0.0084 16.4 0.4 0.028 14.8 0.1 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1456) EF-hand_4 PF12763.7 ORF40235 - 0.012 15.5 0.3 0.017 15.1 0.3 1.3 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF40235 - 0.05 13.9 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain PMBR PF09373.10 ORF40235 - 0.062 13.5 0.0 8.1 6.8 0.0 2.6 3 0 0 3 3 3 0 Pseudomurein-binding repeat Nnf1 PF03980.14 ORF40235 - 0.11 12.8 0.1 0.16 12.4 0.1 1.3 1 0 0 1 1 1 0 Nnf1 CENP-N PF05238.13 ORF39730 - 0.1 11.9 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like zf-NADH-PPase PF09297.11 ORF39107 - 0.0019 17.8 0.3 0.0036 16.9 0.3 1.5 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain Sina PF03145.16 ORF38985 - 0.045 13.7 0.3 0.045 13.7 0.3 1.1 1 0 0 1 1 1 0 Seven in absentia protein family LBP_BPI_CETP_C PF02886.17 ORF38905 - 0.13 11.7 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 LBP / BPI / CETP family, C-terminal domain ROK PF00480.20 ORF37896 - 0.00078 19.0 0.0 0.00087 18.8 0.0 1.1 1 0 0 1 1 1 1 ROK family Autophagy_act_C PF03987.15 ORF37535 - 0.15 12.7 0.9 0.35 11.5 0.6 1.7 2 0 0 2 2 2 0 Autophagocytosis associated protein, active-site domain Virulence_fact PF13769.6 ORF37239 - 0.0087 16.3 0.2 0.0095 16.2 0.2 1.1 1 0 0 1 1 1 1 Virulence factor B3R PF17057.5 ORF37177 - 0.064 13.5 0.0 0.068 13.4 0.0 1.2 1 0 0 1 1 1 0 Poxviridae B3 protein Vps39_2 PF10367.9 ORF37063 - 0.0065 16.9 2.5 0.0067 16.9 2.5 1.0 1 0 0 1 1 1 1 Vacuolar sorting protein 39 domain 2 Amidase02_C PF12123.8 ORF35933 - 0.2 11.4 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 N-acetylmuramoyl-l-alanine amidase DMAP1_like PF17024.5 ORF35633 - 0.021 15.0 0.9 0.025 14.7 0.9 1.1 1 0 0 1 1 1 0 Putative DMAP1-like Hexapep PF00132.24 ORF35344 - 0.0016 18.1 2.1 0.38 10.6 0.1 2.6 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF35344 - 0.0044 16.7 2.2 0.0071 16.1 2.2 1.4 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase SPT16 PF08644.11 ORF35199 - 0.19 11.9 0.3 0.2 11.8 0.3 1.1 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) GLE1 PF07817.13 ORF34746 - 0.1 11.8 0.1 0.1 11.8 0.1 1.1 1 0 0 1 1 1 0 GLE1-like protein UL11 PF11094.8 ORF34716 - 0.41 10.6 4.9 0.76 9.7 4.9 1.5 1 0 0 1 1 1 0 Membrane-associated tegument protein SLS PF14611.6 ORF34714 - 0.012 15.5 0.1 0.013 15.3 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial inner-membrane-bound regulator DUF1736 PF08409.11 ORF34507 - 0.044 13.8 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1736) TraG_N PF07916.11 ORF34314 - 1.2 7.9 10.1 1.4 7.7 10.1 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region zf-CCCH PF00642.24 ORF33800 - 0.00023 21.0 2.7 0.0018 18.1 2.7 2.3 1 1 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF33800 - 0.0043 17.1 1.5 0.0077 16.3 1.5 1.5 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_2 PF14608.6 ORF33800 - 2 9.0 5.7 0.32 11.5 1.5 1.8 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger DUF3530 PF12048.8 ORF33462 - 0.076 12.4 0.4 0.077 12.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) DUF1075 PF06388.11 ORF3300 - 0.075 13.1 0.1 0.082 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1075) DUF2179 PF10035.9 ORF32717 - 0.16 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) WD40 PF00400.32 ORF3189 - 6.9e-12 45.7 0.2 2.5e-06 28.1 0.0 2.0 2 0 0 2 2 2 2 WD domain, G-beta repeat zf-CCHC_5 PF14787.6 ORF3189 - 0.07 12.8 1.5 0.12 12.1 1.5 1.4 1 0 0 1 1 1 0 GAG-polyprotein viral zinc-finger Ge1_WD40 PF16529.5 ORF3189 - 0.26 10.2 0.8 3.8 6.4 0.1 1.9 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein SnoaL_3 PF13474.6 ORF31519 - 0.12 12.6 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like domain Chorion_2 PF03964.15 ORF31464 - 0.054 14.3 2.7 0.055 14.3 2.7 1.1 1 0 0 1 1 1 0 Chorion family 2 O-FucT PF10250.9 ORF31213 - 0.00035 20.4 0.0 0.00043 20.1 0.0 1.1 1 0 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase Toxin_7 PF05980.12 ORF31213 - 0.0026 18.0 0.3 0.0038 17.4 0.3 1.3 1 0 0 1 1 1 1 Toxin 7 Zn_peptidase PF04228.13 ORF3086 - 4e-35 121.7 0.7 4.4e-35 121.5 0.7 1.0 1 0 0 1 1 1 1 Putative neutral zinc metallopeptidase Sad1_UNC PF07738.13 ORF30821 - 0.027 14.5 0.0 0.033 14.2 0.0 1.2 1 0 0 1 1 1 0 Sad1 / UNC-like C-terminal CAMP_factor PF07373.11 ORF30687 - 0.083 12.5 0.1 0.092 12.3 0.1 1.1 1 0 0 1 1 1 0 CAMP factor (Cfa) DHHC PF01529.20 ORF30478 - 0.014 15.5 1.3 0.027 14.6 0.3 1.8 2 0 0 2 2 2 0 DHHC palmitoyltransferase TraS PF10624.9 ORF29943 - 0.56 10.1 4.9 1.6 8.7 2.6 1.9 1 1 1 2 2 2 0 Plasmid conjugative transfer entry exclusion protein TraS IGFL PF14653.6 ORF28510 - 0.011 15.6 0.3 0.014 15.3 0.3 1.3 1 1 0 1 1 1 0 Insulin growth factor-like family Virulence_fact PF13769.6 ORF27969 - 0.0087 16.3 0.2 0.0095 16.2 0.2 1.1 1 0 0 1 1 1 1 Virulence factor FoP_duplication PF13865.6 ORF27936 - 6.5 7.4 14.4 2.3 8.8 6.8 2.0 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 MORN PF02493.20 ORF27934 - 4.1e-08 32.7 3.3 6e-05 22.7 0.7 2.7 3 0 0 3 3 3 2 MORN repeat Spo12 PF05032.12 ORF27446 - 0.011 15.6 1.5 0.011 15.6 1.5 1.7 2 0 0 2 2 2 0 Spo12 family Pox_F12L PF03337.13 ORF27304 - 0.015 13.5 0.0 0.017 13.3 0.0 1.0 1 0 0 1 1 1 0 Poxvirus F12L protein EF-hand_1 PF00036.32 ORF27052 - 8.2e-18 62.6 1.4 3.7e-08 32.4 0.2 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF27052 - 1.8e-15 57.1 0.8 2e-15 57.0 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF27052 - 1.1e-14 53.2 1.2 1.3e-06 27.6 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF27052 - 5.1e-14 50.9 0.6 8.2e-08 31.6 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF27052 - 3.8e-13 49.1 2.6 6.1e-08 32.4 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF27052 - 0.00022 21.5 0.1 0.00029 21.1 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF27052 - 0.00049 20.4 0.3 0.00053 20.3 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF27052 - 0.0024 18.7 0.0 0.0028 18.5 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF27052 - 0.013 15.5 0.4 0.026 14.5 0.4 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 ORF27052 - 0.033 14.4 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 ORF27052 - 0.066 11.7 0.0 0.074 11.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 ORF27052 - 0.075 12.9 0.6 0.45 10.4 0.3 2.1 2 0 0 2 2 2 0 EF hand rve PF00665.26 ORF26991 - 0.093 12.9 0.0 0.095 12.9 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain TMEM239 PF15841.5 ORF26957 - 0.12 12.3 1.1 0.14 12.0 1.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family MORN PF02493.20 ORF2672 - 2e-11 43.1 8.5 0.0018 18.0 0.3 3.1 3 0 0 3 3 3 3 MORN repeat TAP42 PF04177.12 ORF26564 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family INCENP_ARK-bind PF03941.15 ORF26449 - 0.036 14.0 0.1 0.044 13.7 0.1 1.1 1 0 0 1 1 1 0 Inner centromere protein, ARK binding region DUF1499 PF07386.11 ORF26345 - 1e-07 32.5 0.0 1.3e-07 32.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) SAP PF02037.27 ORF26112 - 7.6e-05 22.4 0.2 7.6e-05 22.4 0.2 1.9 2 0 0 2 2 2 1 SAP domain Telomere_Sde2_2 PF13297.6 ORF26112 - 0.00027 20.5 0.1 0.00046 19.8 0.1 1.4 1 1 0 1 1 1 1 Telomere stability C-terminal Corona_S2 PF01601.16 ORF26004 - 6.1 5.2 9.2 5.6 5.3 9.2 1.1 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein MFS_2 PF13347.6 ORF25775 - 2.9e-11 42.6 2.9 3.1e-11 42.5 2.9 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Tam41_Mmp37 PF09139.11 ORF25627 - 0.00076 19.0 0.0 0.00078 19.0 0.0 1.0 1 0 0 1 1 1 1 Phosphatidate cytidylyltransferase, mitochondrial Sel_put PF04328.13 ORF25627 - 0.092 12.8 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Selenoprotein, putative Luteo_P1-P2 PF08467.10 ORF24465 - 0.0097 15.2 0.1 0.0097 15.2 0.1 1.0 1 0 0 1 1 1 1 Luteovirus RNA polymerase P1-P2/replicase KMP11 PF03037.16 ORF23988 - 0.014 16.2 0.6 0.016 16.0 0.6 1.1 1 0 0 1 1 1 0 Kinetoplastid membrane protein 11 COG5 PF10392.9 ORF23988 - 0.03 14.5 0.1 0.037 14.2 0.1 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 HBM PF16591.5 ORF23988 - 0.063 12.7 0.1 0.071 12.5 0.1 1.0 1 0 0 1 1 1 0 Helical bimodular sensor domain Metal_resist PF13801.6 ORF23988 - 0.083 13.1 0.1 0.094 12.9 0.1 1.1 1 0 0 1 1 1 0 Heavy-metal resistance Ilar_coat PF01787.16 ORF23601 - 0.58 9.9 4.0 0.56 10.0 4.0 1.0 1 0 0 1 1 1 0 Ilarvirus coat protein DUF1233 PF06806.12 ORF2359 - 1.7e-20 72.3 0.1 2e-20 72.1 0.1 1.0 1 0 0 1 1 1 1 Putative excisionase (DUF1233) YqgB PF11036.8 ORF23433 - 0.18 11.5 0.0 0.37 10.5 0.0 1.5 1 0 0 1 1 1 0 Virulence promoting factor DUF1272 PF06906.11 ORF22976 - 0.11 12.5 0.1 0.23 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) CENP-N PF05238.13 ORF22794 - 0.1 11.9 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like DUF3914 PF13053.6 ORF22760 - 0.093 13.1 0.0 0.098 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3914) RNF220 PF15926.5 ORF2273 - 0.018 14.6 0.4 0.021 14.5 0.4 1.1 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase RNF220 Zn-C2H2_12 PF18112.1 ORF2273 - 1.8 9.1 4.3 10 6.7 4.3 2.0 1 1 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain Pho86 PF11124.8 ORF22514 - 0.0064 16.0 1.8 0.0067 15.9 1.8 1.0 1 0 0 1 1 1 1 Inorganic phosphate transporter Pho86 rpo30_N PF12410.8 ORF21756 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Poxvirus DNA dependent RNA polymerase 30kDa subunit ERGIC_N PF13850.6 ORF21585 - 0.0012 19.1 0.3 0.0014 19.0 0.3 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) AGP PF06376.12 ORF21585 - 0.077 12.9 1.8 0.14 12.1 1.8 1.4 1 0 0 1 1 1 0 Arabinogalactan peptide ATP-synt_ab_C PF00306.27 ORF21374 - 0.12 12.7 0.0 0.12 12.7 0.0 1.0 1 0 0 1 1 1 0 ATP synthase alpha/beta chain, C terminal domain FHA PF00498.26 ORF2120 - 6.1e-11 42.5 1.2 1.9e-10 40.9 0.4 1.8 1 1 1 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 ORF2120 - 1.1e-05 25.7 0.1 1.2e-05 25.5 0.1 1.1 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain MU2_FHA PF18221.1 ORF2120 - 0.0049 16.9 0.0 0.0053 16.8 0.0 1.2 1 0 0 1 1 1 1 Mutator 2 Fork head associated domain Remorin_N PF03766.13 ORF20955 - 0.14 12.2 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Remorin, N-terminal region RDM PF11002.8 ORF20881 - 0.16 12.0 0.0 0.24 11.5 0.0 1.2 1 0 0 1 1 1 0 RFPL defining motif (RDM) DUF4611 PF15387.6 ORF20746 - 0.019 15.2 1.3 0.025 14.8 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) RNase_H_2 PF13482.6 ORF20746 - 0.081 12.9 0.2 0.084 12.9 0.2 1.1 1 0 0 1 1 1 0 RNase_H superfamily RhoGEF67_u1 PF16615.5 ORF20553 - 0.14 12.7 4.7 0.23 12.0 4.7 1.5 1 1 0 1 1 1 0 Unstructured region one on RhoGEF 6 and 7 DUF2492 PF10678.9 ORF20201 - 0.11 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) DUF2492 PF10678.9 ORF19784 - 0.11 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) CRA PF06589.11 ORF19429 - 0.033 14.3 1.2 0.039 14.0 1.2 1.0 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) Enkurin PF13864.6 ORF19307 - 0.00091 19.6 2.1 0.0011 19.3 2.1 1.2 1 0 0 1 1 1 1 Calmodulin-binding Cep57_MT_bd PF06657.13 ORF19307 - 0.014 15.9 3.4 0.021 15.3 2.7 1.6 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 Cob_adeno_trans PF01923.18 ORF19307 - 0.039 14.1 0.7 0.042 14.0 0.7 1.0 1 0 0 1 1 1 0 Cobalamin adenosyltransferase LRS4 PF10422.9 ORF19307 - 0.039 13.5 6.7 0.042 13.4 6.7 1.0 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 HEPN_Toprim_N PF18871.1 ORF19307 - 0.043 13.7 0.0 0.046 13.7 0.0 1.0 1 0 0 1 1 1 0 HEPN/Toprim N-terminal domain 1 FlxA PF14282.6 ORF19307 - 0.29 11.1 9.6 0.34 10.9 9.6 1.2 1 0 0 1 1 1 0 FlxA-like protein Fib_alpha PF08702.10 ORF19307 - 0.31 11.2 5.7 0.33 11.1 5.7 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_C3G PF12381.8 ORF19221 - 0.094 12.2 0.3 0.1 12.0 0.3 1.0 1 0 0 1 1 1 0 Tungro spherical virus-type peptidase GP41 PF00517.17 ORF18782 - 0.41 10.5 5.4 0.44 10.4 5.4 1.0 1 0 0 1 1 1 0 Retroviral envelope protein Cut8 PF08559.10 ORF17817 - 0.014 15.0 0.0 0.019 14.6 0.0 1.1 1 0 0 1 1 1 0 Cut8, nuclear proteasome tether protein tRNA_U5-meth_tr PF05958.11 ORF17752 - 0.11 11.4 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase HEAT_2 PF13646.6 ORF17437 - 0.022 15.1 0.0 0.023 15.1 0.0 1.2 1 0 0 1 1 1 0 HEAT repeats Prophage_tail PF06605.11 ORF17072 - 0.17 11.1 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Prophage endopeptidase tail IL12 PF03039.14 ORF1663 - 0.002 17.5 0.1 0.0022 17.3 0.1 1.0 1 0 0 1 1 1 1 Interleukin-12 alpha subunit HrpJ PF07201.11 ORF16338 - 0.0015 18.9 0.8 0.0017 18.7 0.8 1.1 1 0 0 1 1 1 1 HrpJ-like domain Herpes_env PF01673.18 ORF16338 - 0.15 11.0 0.0 0.16 10.8 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus putative major envelope glycoprotein DUF1290 PF06947.12 ORF1625 - 0.038 14.1 0.1 0.055 13.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1290) BppL_N PF18338.1 ORF16122 - 0.14 12.0 0.1 0.21 11.4 0.1 1.2 1 0 0 1 1 1 0 Lower baseplate protein N-terminal domain DUF3012 PF11216.8 ORF16067 - 0.08 13.0 0.1 0.15 12.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3012) Aa_trans PF01490.18 ORF15983 - 9.6e-06 24.6 3.7 1e-05 24.4 3.7 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein RAMP4 PF06624.12 ORF15983 - 0.061 13.4 0.3 0.096 12.8 0.3 1.5 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Phage_holin_3_6 PF07332.11 ORF15983 - 0.11 12.6 3.2 0.14 12.2 3.2 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4389 PF14333.6 ORF15983 - 0.57 10.1 9.0 1.5 8.8 5.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) DUF1830 PF08865.11 ORF15791 - 0.025 14.6 0.4 0.052 13.5 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1830) TAP42 PF04177.12 ORF15542 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family TraU PF06834.11 ORF15406 - 0.21 10.8 0.1 0.25 10.6 0.1 1.1 1 0 0 1 1 1 0 TraU protein DCR PF14047.6 ORF14580 - 0.074 13.3 0.1 0.088 13.0 0.1 1.2 1 0 0 1 1 1 0 Dppa2/4 conserved region DUF3182 PF11379.8 ORF1454 - 0.079 11.9 0.0 0.083 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3182) FoP_duplication PF13865.6 ORF14473 - 6.5 7.4 14.4 2.3 8.8 6.8 2.0 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 PGA2 PF07543.12 ORF14454 - 0.71 9.8 8.1 1.4 8.9 8.1 1.6 1 1 0 1 1 1 0 Protein trafficking PGA2 cNMP_binding PF00027.29 ORF14225 - 0.00015 21.8 0.0 0.0004 20.4 0.0 1.6 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain DUF3333 PF11812.8 ORF13603 - 0.09 13.0 0.0 0.1 12.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) TMEM247 PF15444.6 ORF13145 - 2.3 8.2 4.3 2.6 8.0 4.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 PDZ_5 PF17817.1 ORF12876 - 0.13 12.6 2.3 0.29 11.5 0.1 2.1 1 1 1 2 2 2 0 PDZ domain SNAD3 PF18749.1 ORF11896 - 0.099 11.8 0.1 0.1 11.7 0.1 1.0 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 3 Neuromodulin PF06614.11 ORF11652 - 0.072 13.3 0.0 0.083 13.1 0.0 1.0 1 0 0 1 1 1 0 Neuromodulin GIDE PF12483.8 ORF112490 - 0.036 13.4 0.1 0.04 13.3 0.1 1.1 1 0 0 1 1 1 0 E3 Ubiquitin ligase LRR_2 PF07723.13 ORF111638 - 0.041 14.6 0.1 0.15 12.8 0.1 1.9 2 0 0 2 2 2 0 Leucine Rich Repeat La_HTH_kDCL PF18177.1 ORF111633 - 0.027 14.8 0.0 0.028 14.7 0.0 1.1 1 0 0 1 1 1 0 La HTH in kinetoplastid DICER domain DUF3530 PF12048.8 ORF110298 - 0.076 12.4 0.4 0.077 12.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Epiglycanin_TR PF05647.11 ORF109803 - 0.15 12.0 1.7 0.73 9.8 0.1 2.0 2 0 0 2 2 2 0 Tandem-repeating region of mucin, epiglycanin-like SPT16 PF08644.11 ORF109793 - 0.19 11.9 0.3 0.2 11.8 0.3 1.1 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) MORN PF02493.20 ORF108683 - 2.1e-11 43.0 7.2 3.6e-06 26.5 2.1 2.5 2 0 0 2 2 2 2 MORN repeat IpaB_EvcA PF03278.13 ORF107425 - 0.0014 18.3 1.1 0.0016 18.2 1.1 1.1 1 0 0 1 1 1 1 IpaB/EvcA family DUF4665 PF15679.5 ORF107425 - 0.0055 17.3 3.3 0.0057 17.3 3.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4665) NdhS PF11623.8 ORF107132 - 0.17 11.5 0.0 1.7 8.4 0.0 2.0 2 0 0 2 2 2 0 NAD(P)H dehydrogenase subunit S Uma2 PF05685.12 ORF107030 - 0.083 12.4 0.0 0.091 12.3 0.0 1.1 1 0 0 1 1 1 0 Putative restriction endonuclease DUF3747 PF12565.8 ORF106915 - 0.22 10.9 0.0 0.24 10.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3747) RNA12 PF10443.9 ORF106666 - 0.0027 16.5 0.0 0.0028 16.5 0.0 1.0 1 0 0 1 1 1 1 RNA12 protein nsp9 PF08710.10 ORF106666 - 0.084 13.3 0.0 0.089 13.2 0.0 1.0 1 0 0 1 1 1 0 nsp9 replicase DUF5383 PF17355.2 ORF106628 - 0.2 12.0 0.4 0.2 12.0 0.4 1.4 2 0 0 2 2 2 0 Family of unknown function (DUF5383) Med4 PF10018.9 ORF10653 - 0.044 13.5 2.5 0.05 13.3 2.5 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 PACT_coil_coil PF10495.9 ORF105891 - 0.059 13.9 0.3 0.072 13.7 0.3 1.1 1 0 0 1 1 1 0 Pericentrin-AKAP-450 domain of centrosomal targeting protein RmuC PF02646.16 ORF105272 - 0.02 14.0 0.1 0.022 13.9 0.1 1.0 1 0 0 1 1 1 0 RmuC family TAP42 PF04177.12 ORF105103 - 0.12 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 TAP42-like family Fur_reg_FbpB PF13040.6 ORF104409 - 0.015 14.9 0.4 0.015 14.9 0.4 2.4 2 1 0 2 2 2 0 Fur-regulated basic protein B DUF5058 PF16481.5 ORF104348 - 0.0063 16.2 0.0 0.0076 16.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5058) EKAL PF17986.1 ORF10380 - 0.0053 16.8 3.8 0.0074 16.3 3.4 1.6 1 1 0 1 1 1 1 EMP3-KAHRP-like N-terminal domain HTH_19 PF12844.7 ORF10380 - 0.027 14.5 3.3 0.028 14.4 2.6 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain Phage_Mu_Gam PF07352.12 ORF10380 - 0.03 14.2 8.8 0.033 14.1 8.8 1.1 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein SfsA PF03749.13 ORF10380 - 0.03 14.2 0.6 0.032 14.1 0.6 1.1 1 0 0 1 1 1 0 Sugar fermentation stimulation protein RE domain MbeB_N PF04837.12 ORF10380 - 0.052 13.9 4.4 0.086 13.2 4.4 1.3 1 0 0 1 1 1 0 MbeB-like, N-term conserved region DUF4407 PF14362.6 ORF10380 - 0.47 9.7 7.3 0.49 9.7 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CENP-N PF05238.13 ORF103535 - 0.1 11.9 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like YgbA_NO PF11756.8 ORF103439 - 0.027 14.8 0.0 0.031 14.6 0.0 1.1 1 0 0 1 1 1 0 Nitrous oxide-stimulated promoter PDZ_2 PF13180.6 ORF102525 - 0.0021 18.3 0.1 0.0042 17.4 0.1 1.4 1 1 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF102525 - 0.042 14.2 0.1 0.053 13.9 0.1 1.3 1 0 0 1 1 1 0 PDZ domain PDZ_6 PF17820.1 ORF102525 - 0.058 13.2 0.8 0.15 11.9 0.8 1.7 1 1 0 1 1 1 0 PDZ domain N_formyltrans_C PF18216.1 ORF102464 - 0.081 12.6 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 N-formyltransferase dimerization C-terminal domain PRRSV_Env PF02340.15 ORF102133 - 2.1 7.6 5.8 2.2 7.6 5.8 1.1 1 0 0 1 1 1 0 PRRSV putative envelope protein SAP PF02037.27 ORF101825 - 7.6e-05 22.4 0.2 7.6e-05 22.4 0.2 1.9 2 0 0 2 2 2 1 SAP domain Telomere_Sde2_2 PF13297.6 ORF101825 - 0.00027 20.5 0.1 0.00046 19.8 0.1 1.4 1 1 0 1 1 1 1 Telomere stability C-terminal SHIPPO-rpt PF07004.12 ORF10178 - 9.3e-06 26.3 5.3 0.038 14.9 0.1 2.5 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat DUF2135 PF09906.9 ORF10178 - 0.071 13.4 1.1 0.93 9.8 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2135) MFS_1 PF07690.16 ORF101725 - 0.062 12.2 5.7 0.066 12.1 5.7 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily PqiA PF04403.13 ORF101725 - 0.19 11.5 3.9 0.2 11.5 3.9 1.0 1 0 0 1 1 1 0 Paraquat-inducible protein A DUF5460 PF17544.2 ORF101635 - 0.16 10.9 0.0 0.19 10.7 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5460) DUF3530 PF12048.8 ORF100698 - 0.076 12.4 0.4 0.077 12.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Osmo_CC PF08946.10 ORF100554 - 0.0083 16.4 1.0 0.016 15.4 1.0 1.5 1 0 0 1 1 1 1 Osmosensory transporter coiled coil SOGA PF11365.8 ORF100554 - 0.013 16.6 0.9 0.13 13.4 1.0 1.9 1 1 0 1 1 1 0 Protein SOGA Nup54 PF13874.6 ORF100554 - 0.018 15.1 0.1 0.023 14.8 0.1 1.2 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 TMF_TATA_bd PF12325.8 ORF100554 - 0.032 14.4 0.9 0.047 13.9 0.9 1.3 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding TolA_bind_tri PF16331.5 ORF100554 - 0.033 14.3 1.3 2.6 8.2 0.0 2.0 2 0 0 2 2 2 0 TolA binding protein trimerisation CREPT PF16566.5 ORF100554 - 0.052 13.7 0.3 0.76 9.9 0.2 1.9 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour LidA_Long_CC PF18641.1 ORF100554 - 0.066 13.3 2.1 0.083 12.9 2.1 1.2 1 1 0 1 1 1 0 LidA long coiled-coil domain YkyA PF10368.9 ORF100554 - 0.11 12.2 4.8 0.32 10.6 4.8 1.6 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein DUF267 PF03268.14 ORF100554 - 0.12 11.2 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF267 ABC_tran_CTD PF16326.5 ORF100554 - 0.12 12.6 3.2 0.19 12.0 3.2 1.3 1 1 0 1 1 1 0 ABC transporter C-terminal domain Prefoldin_2 PF01920.20 ORF100554 - 0.2 11.7 4.1 0.75 9.8 2.0 1.7 1 1 0 1 1 1 0 Prefoldin subunit DivIC PF04977.15 ORF100554 - 0.29 10.9 3.0 0.83 9.5 2.2 1.9 1 1 1 2 2 2 0 Septum formation initiator TraC PF07820.12 ORF100554 - 0.42 11.0 2.5 0.66 10.3 2.3 1.6 1 1 0 1 1 1 0 TraC-like protein PAP_assoc PF03828.19 ORF100322 - 0.085 13.1 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Cid1 family poly A polymerase Plant_zn_clust PF10533.9 ORF100089 - 1.8 8.7 4.9 0.52 10.4 1.2 2.0 2 0 0 2 2 2 0 Plant zinc cluster domain SelP_N PF04592.14 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_1 - 7.6 5.9 14.0 8.2 5.7 14.0 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region PDGF PF00341.17 NODE_75982_length_208_cov_0.820809_g68041_i0forward_frame_1 - 0.027 14.7 2.0 0.031 14.6 2.0 1.2 1 0 0 1 1 1 0 PDGF/VEGF domain HrpB1_HrpK PF09613.10 NODE_75980_length_208_cov_0.843931_g68039_i0reverse_frame_1 - 0.06 13.0 0.7 1.9 8.1 0.2 2.0 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) Cecropin PF00272.19 NODE_75980_length_208_cov_0.843931_g68039_i0forward_frame_1 - 0.037 13.8 0.1 0.037 13.8 0.1 2.0 3 0 0 3 3 3 0 Cecropin family Mg_chelatase PF01078.21 NODE_75979_length_208_cov_0.855491_g68038_i0forward_frame_1 - 0.19 11.1 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RtcR PF06956.11 NODE_75978_length_208_cov_0.867052_g68037_i0reverse_frame_1 - 0.028 13.8 0.1 0.028 13.8 0.1 1.0 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase Orexin PF02072.15 NODE_75946_length_208_cov_0.924855_g68005_i0reverse_frame_1 - 0.039 13.9 0.0 0.042 13.8 0.0 1.0 1 0 0 1 1 1 0 Prepro-orexin Hexapep PF00132.24 NODE_75944_length_208_cov_0.965318_g68003_i0forward_frame_1 - 2.5e-14 52.3 14.2 2.3e-07 30.2 5.4 2.1 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 NODE_75944_length_208_cov_0.965318_g68003_i0forward_frame_1 - 0.00065 19.4 13.1 0.0089 15.8 12.3 2.6 1 1 1 2 2 2 2 Hexapeptide repeat of succinyl-transferase Zn_Tnp_IS1595 PF12760.7 NODE_75934_length_208_cov_1.040462_g67993_i0reverse_frame_1 - 9.8 6.2 11.5 0.51 10.4 3.3 2.4 2 1 0 2 2 2 0 Transposase zinc-ribbon domain GGN PF15685.5 NODE_75933_length_208_cov_1.040462_g67992_i0reverse_frame_1 - 0.02 14.0 0.1 0.022 13.9 0.1 1.0 1 0 0 1 1 1 0 Gametogenetin SKG6 PF08693.10 NODE_75929_length_208_cov_1.075145_g67988_i0reverse_frame_1 - 0.041 13.3 3.5 0.06 12.8 3.5 1.3 1 0 0 1 1 1 0 Transmembrane alpha-helix domain 7tm_6 PF02949.20 NODE_75924_length_208_cov_1.092486_g67983_i0reverse_frame_1 - 0.018 14.2 0.2 0.022 13.8 0.2 1.0 1 0 0 1 1 1 0 7tm Odorant receptor MRP-S33 PF08293.11 NODE_75923_length_208_cov_1.098266_g67982_i0forward_frame_1 - 0.018 15.2 0.3 0.02 15.1 0.3 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit S27 DUF3671 PF12420.8 NODE_75913_length_208_cov_1.156069_g67972_i0forward_frame_1 - 0.00076 19.5 0.1 0.00078 19.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF456 PF04306.13 NODE_75913_length_208_cov_1.156069_g67972_i0forward_frame_1 - 0.0021 18.4 0.3 0.0024 18.2 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF456) Calponin PF00402.18 NODE_75910_length_208_cov_1.190751_g67969_i0reverse_frame_1 - 0.026 14.2 0.1 1.1 9.0 0.0 2.4 2 0 0 2 2 2 0 Calponin family repeat Kelch_1 PF01344.25 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 4.2e-11 42.3 2.0 6e-06 25.8 0.1 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 2.9e-09 36.8 2.2 3.2e-05 23.8 0.7 2.1 1 1 1 2 2 2 2 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 3.5e-08 33.4 1.8 0.0029 17.9 0.3 2.1 1 1 1 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 1.9e-06 28.0 0.4 0.006 16.8 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 0.0048 16.8 0.1 0.0073 16.3 0.1 1.4 1 0 0 1 1 1 1 Kelch motif DUF1247 PF06851.11 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 0.05 13.5 0.0 0.055 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) Kelch_2 PF07646.15 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 0.08 13.0 0.1 1.2 9.2 0.0 2.1 2 0 0 2 2 2 0 Kelch motif Alg14 PF08660.11 NODE_75904_length_208_cov_1.260116_g67963_i0reverse_frame_1 - 0.026 14.5 0.2 0.03 14.3 0.2 1.0 1 0 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like PEGSRP PF07623.11 NODE_75897_length_208_cov_1.306358_g67956_i0forward_frame_1 - 0.1 12.4 0.9 0.22 11.4 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1584) CDRN PF05174.12 NODE_75888_length_208_cov_1.364162_g67947_i0forward_frame_1 - 0.034 13.8 0.1 0.04 13.6 0.1 1.4 1 1 0 1 1 1 0 Cysteine-rich D. radiodurans N terminus PelD_GGDEF PF16963.5 NODE_75883_length_208_cov_1.375723_g67942_i0forward_frame_1 - 0.018 14.8 0.3 0.03 14.1 0.3 1.2 1 0 0 1 1 1 0 PelD GGDEF domain PRY PF13765.6 NODE_75882_length_208_cov_1.375723_g67941_i0reverse_frame_1 - 0.064 12.9 0.0 0.094 12.4 0.0 1.2 1 0 0 1 1 1 0 SPRY-associated domain DUF2946 PF11162.8 NODE_75880_length_208_cov_1.381503_g67939_i0reverse_frame_1 - 0.043 14.5 0.0 0.045 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) PROL5-SMR PF15621.6 NODE_75878_length_208_cov_1.387283_g67937_i0reverse_frame_1 - 4.3 7.9 7.9 1.8 9.1 3.8 1.9 1 1 1 2 2 2 0 Proline-rich submaxillary gland androgen-regulated family SNF PF00209.18 NODE_75877_length_208_cov_1.387283_g67936_i0forward_frame_1 - 3.6e-09 35.9 0.7 3.7e-09 35.8 0.7 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family Pox_A32 PF04665.12 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.00071 19.1 0.0 0.00072 19.1 0.0 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein AAA_29 PF13555.6 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.0089 15.8 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.038 13.4 0.0 0.042 13.3 0.0 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.047 13.6 0.0 0.055 13.4 0.0 1.1 1 0 0 1 1 1 0 NACHT domain FtsK_SpoIIIE PF01580.18 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.12 11.7 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family Ribosomal_L5e PF17144.4 NODE_75864_length_208_cov_1.398844_g67923_i0reverse_frame_1 - 0.088 12.8 5.5 0.1 12.6 5.5 1.0 1 0 0 1 1 1 0 Ribosomal large subunit proteins 60S L5, and 50S L18 DUF1413 PF07205.11 NODE_75859_length_208_cov_1.421965_g67918_i0forward_frame_1 - 0.14 12.2 0.5 0.46 10.5 0.0 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1413) Yae1_N PF09811.9 NODE_75848_length_208_cov_1.468208_g67907_i0reverse_frame_1 - 0.073 12.8 5.4 0.23 11.2 5.4 1.8 1 1 0 1 1 1 0 Essential protein Yae1, N terminal C_tripleX PF02363.19 NODE_75848_length_208_cov_1.468208_g67907_i0forward_frame_1 - 9.1 6.8 11.5 1.5e+02 3.0 7.5 3.2 2 1 0 2 2 2 0 Cysteine rich repeat Metaviral_G PF09595.10 NODE_75838_length_208_cov_1.520231_g67897_i0forward_frame_1 - 0.00074 19.6 0.3 0.00077 19.6 0.3 1.1 1 0 0 1 1 1 1 Metaviral_G glycoprotein S4 PF01479.25 NODE_75837_length_208_cov_1.531792_g67896_i0reverse_frame_1 - 0.2 11.4 0.6 0.32 10.8 0.6 1.3 1 0 0 1 1 1 0 S4 domain Reo_P9 PF06043.11 NODE_75836_length_208_cov_1.537572_g67895_i0reverse_frame_1 - 0.042 13.2 0.7 0.045 13.2 0.7 1.0 1 0 0 1 1 1 0 Reovirus P9-like family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks348.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks348.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks348.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks348.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:23:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- 6PF2K PF01591.18 NODE_75826_length_208_cov_1.601156_g67885_i0reverse_frame_1 - 0.027 13.8 0.3 0.029 13.7 0.3 1.0 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_lid_4 PF17864.1 NODE_75826_length_208_cov_1.601156_g67885_i0reverse_frame_1 - 0.16 11.8 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 RuvB AAA lid domain Mersacidin PF16934.5 NODE_75823_length_208_cov_1.612717_g67882_i0reverse_frame_1 - 0.079 12.7 0.1 0.11 12.3 0.1 1.3 1 1 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) GreA_GreB PF01272.19 NODE_75822_length_208_cov_1.612717_g67881_i0reverse_frame_1 - 0.022 14.6 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 Transcription elongation factor, GreA/GreB, C-term DUF496 PF04363.12 NODE_75822_length_208_cov_1.612717_g67881_i0reverse_frame_1 - 0.031 14.3 0.1 0.036 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF496) Speriolin_C PF15059.6 NODE_75821_length_208_cov_1.612717_g67880_i0reverse_frame_1 - 0.1 12.8 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Speriolin C-terminus AKAP28 PF14469.6 NODE_75819_length_208_cov_1.618497_g67878_i0reverse_frame_1 - 0.044 13.6 0.6 0.19 11.5 0.0 1.8 1 1 1 2 2 2 0 28 kDa A-kinase anchor Glyco_transf_5 PF08323.11 NODE_75819_length_208_cov_1.618497_g67878_i0forward_frame_1 - 0.078 12.7 0.0 0.083 12.6 0.0 1.1 1 0 0 1 1 1 0 Starch synthase catalytic domain Peptidase_M3 PF01432.20 NODE_75817_length_208_cov_1.618497_g67876_i0forward_frame_1 - 6.4e-17 61.9 0.0 6.8e-17 61.9 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 ComFB PF10719.9 NODE_75814_length_208_cov_1.664740_g67873_i0reverse_frame_1 - 0.0084 16.2 0.4 0.013 15.5 0.4 1.4 1 1 0 1 1 1 1 Late competence development protein ComFB DS PF01916.17 NODE_75808_length_208_cov_1.687861_g67867_i0reverse_frame_1 - 0.17 11.1 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Deoxyhypusine synthase HTH_16 PF12645.7 NODE_75805_length_208_cov_1.705202_g67864_i0reverse_frame_1 - 0.1 12.7 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Arg_repressor PF01316.21 NODE_75802_length_208_cov_1.722543_g67861_i0reverse_frame_1 - 0.00062 19.5 0.0 0.00085 19.0 0.0 1.2 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain DUF494 PF04361.13 NODE_75802_length_208_cov_1.722543_g67861_i0reverse_frame_1 - 0.19 11.6 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF494) UL2 PF08196.11 NODE_75800_length_208_cov_1.757225_g67859_i0reverse_frame_1 - 0.12 12.4 1.5 0.18 11.8 1.5 1.4 1 0 0 1 1 1 0 UL2 protein DUF3772 PF12607.8 NODE_75797_length_208_cov_1.791908_g67856_i0forward_frame_1 - 0.072 12.9 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) Prominin PF05478.11 NODE_75785_length_208_cov_1.849711_g67844_i0reverse_frame_1 - 0.12 10.3 0.8 0.13 10.2 0.8 1.0 1 0 0 1 1 1 0 Prominin DNA_pol_viral_C PF00336.18 NODE_75778_length_208_cov_1.907514_g67837_i0reverse_frame_1 - 0.085 12.2 0.0 0.085 12.2 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) C-terminal domain DUF806 PF05657.11 NODE_75765_length_208_cov_2.000000_g67824_i0reverse_frame_1 - 0.024 15.1 0.1 0.029 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF806) PRRSV_2b PF07069.11 NODE_75753_length_208_cov_2.248555_g67812_i0forward_frame_1 - 4.5 7.9 8.9 0.29 11.7 2.9 1.8 1 1 1 2 2 2 0 Porcine reproductive and respiratory syndrome virus 2b DivIC PF04977.15 NODE_75743_length_208_cov_2.381503_g67802_i0reverse_frame_1 - 0.0019 17.9 0.2 0.0024 17.6 0.2 1.1 1 0 0 1 1 1 1 Septum formation initiator TMF_DNA_bd PF12329.8 NODE_75743_length_208_cov_2.381503_g67802_i0reverse_frame_1 - 0.02 14.9 0.1 0.026 14.5 0.1 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding ZapB PF06005.12 NODE_75743_length_208_cov_2.381503_g67802_i0reverse_frame_1 - 0.043 14.3 0.1 0.057 13.9 0.1 1.3 1 0 0 1 1 1 0 Cell division protein ZapB Ank_4 PF13637.6 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 0.00048 20.6 0.0 0.00085 19.8 0.0 1.4 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 0.00048 20.4 0.1 0.042 14.3 0.1 2.2 2 0 0 2 2 2 1 Ankyrin repeat Ank_5 PF13857.6 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 0.0013 19.0 0.0 0.0018 18.6 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 0.01 16.4 0.0 0.012 16.2 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 0.1 13.2 0.0 0.84 10.4 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat Imm57 PF15596.6 NODE_75725_length_208_cov_2.820809_g67784_i0forward_frame_1 - 1.3e-39 134.9 1.2 1.4e-39 134.8 1.2 1.0 1 0 0 1 1 1 1 Immunity protein 57 DHC_N1 PF08385.12 NODE_75725_length_208_cov_2.820809_g67784_i0forward_frame_1 - 0.054 12.1 0.0 0.058 12.0 0.0 1.0 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 1 CBM9_2 PF16011.5 NODE_75719_length_208_cov_3.005780_g67778_i0reverse_frame_1 - 0.063 13.0 0.1 0.072 12.8 0.1 1.2 1 0 0 1 1 1 0 Carbohydrate-binding family 9 Anoctamin PF04547.12 NODE_75710_length_208_cov_3.803468_g67769_i0forward_frame_1 - 3.7e-05 22.8 0.4 4.3e-05 22.6 0.4 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel MyTH4 PF00784.17 NODE_75708_length_208_cov_3.982659_g67767_i0forward_frame_1 - 0.067 13.7 0.2 0.09 13.3 0.2 1.2 1 0 0 1 1 1 0 MyTH4 domain zf-RING_2 PF13639.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.0017 18.7 0.1 0.0022 18.3 0.1 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.0051 16.6 0.2 0.007 16.2 0.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.0069 16.6 0.2 0.0099 16.2 0.2 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.044 13.5 0.4 0.072 12.8 0.4 1.4 1 0 0 1 1 1 0 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.045 13.8 0.2 0.082 12.9 0.2 1.4 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.045 13.7 0.2 0.068 13.2 0.2 1.2 1 0 0 1 1 1 0 zinc-RING finger domain DUF5531 PF17671.1 NODE_75692_length_208_cov_32.855491_g67751_i0forward_frame_1 - 0.16 11.8 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5531) Med19 PF10278.9 NODE_75685_length_208_cov_40.260116_g67744_i0reverse_frame_1 - 0.0014 18.6 0.3 0.0018 18.2 0.3 1.1 1 0 0 1 1 1 1 Mediator of RNA pol II transcription subunit 19 AIB PF15334.6 NODE_75685_length_208_cov_40.260116_g67744_i0reverse_frame_1 - 0.1 11.9 4.2 0.12 11.7 4.2 1.1 1 0 0 1 1 1 0 Aurora kinase A and ninein interacting protein UPF0239 PF06783.11 NODE_75685_length_208_cov_40.260116_g67744_i0reverse_frame_1 - 0.45 10.7 5.7 0.56 10.4 5.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) zf-RING_2 PF13639.6 NODE_75684_length_208_cov_41.127168_g67743_i0forward_frame_1 - 0.0048 17.2 5.6 0.25 11.7 0.8 2.1 1 1 1 2 2 2 2 Ring finger domain Prok-RING_1 PF14446.6 NODE_75684_length_208_cov_41.127168_g67743_i0forward_frame_1 - 0.055 13.4 1.4 0.068 13.1 0.0 1.7 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4_2 PF13923.6 NODE_75684_length_208_cov_41.127168_g67743_i0forward_frame_1 - 0.39 10.6 7.0 1.1 9.2 1.1 2.1 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) NOA36 PF06524.12 NODE_75678_length_208_cov_45.728324_g67737_i0reverse_frame_1 - 3.2 7.0 7.1 3.7 6.8 7.1 1.0 1 0 0 1 1 1 0 NOA36 protein Ribosomal_60s PF00428.19 NODE_75678_length_208_cov_45.728324_g67737_i0reverse_frame_1 - 5.2 7.7 14.6 6.5 7.4 14.6 1.1 1 0 0 1 1 1 0 60s Acidic ribosomal protein Seipin PF06775.14 NODE_75668_length_208_cov_52.132948_g67727_i0reverse_frame_1 - 0.066 13.3 0.1 0.069 13.2 0.1 1.0 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) DUF269 PF03270.13 NODE_75667_length_208_cov_53.138728_g67726_i0forward_frame_1 - 0.012 15.7 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF269 RNA_polI_A34 PF08208.11 NODE_75666_length_208_cov_53.433526_g67725_i0reverse_frame_1 - 0.081 13.0 10.4 0.083 13.0 10.4 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 FOP_dimer PF09398.10 NODE_75664_length_208_cov_59.242775_g67723_i0reverse_frame_1 - 0.055 13.7 0.1 0.078 13.2 0.1 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain Glucos_trans_II PF14264.6 NODE_75664_length_208_cov_59.242775_g67723_i0reverse_frame_1 - 0.11 11.9 4.9 0.11 11.8 4.9 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII zf-RING_2 PF13639.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 5.1e-10 39.5 1.4 5.1e-10 39.5 1.4 1.4 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 1.8e-09 37.7 2.3 2.4e-09 37.3 2.3 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 6.7e-08 32.2 3.4 9.6e-08 31.8 3.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 1.7e-07 31.0 1.7 2.3e-07 30.6 1.7 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 7.9e-06 25.8 0.5 9.7e-06 25.6 0.5 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.00014 21.5 0.2 0.00014 21.5 0.2 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.00018 21.3 1.2 0.00025 20.8 1.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.00044 20.2 1.3 0.00069 19.5 1.3 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.00058 19.4 3.1 0.00077 19.0 3.1 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.00083 19.2 3.1 0.0011 18.7 3.1 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0014 18.7 1.0 0.0022 18.1 1.0 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0014 18.6 5.7 0.0045 17.0 5.4 1.8 1 1 1 2 2 2 1 RING-type zinc-finger Zn-ribbon_8 PF09723.10 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0028 17.7 1.4 0.0042 17.2 0.7 1.7 2 1 0 2 2 2 1 Zinc ribbon domain zf-Nse PF11789.8 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0099 15.7 0.8 0.014 15.2 0.8 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit FANCL_C PF11793.8 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.013 15.7 4.6 0.12 12.6 4.6 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING-like PF08746.11 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.032 14.5 3.0 0.032 14.5 3.0 1.5 2 0 0 2 2 2 0 RING-like domain RINGv PF12906.7 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.12 12.5 4.2 0.19 11.9 4.2 1.3 1 0 0 1 1 1 0 RING-variant domain zinc-ribbons_6 PF07191.12 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.12 12.4 2.5 0.17 11.9 2.5 1.3 1 1 0 1 1 1 0 zinc-ribbons SelK_SelG PF10961.8 NODE_75649_length_208_cov_95.774566_g67708_i0forward_frame_1 - 0.12 13.0 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 Selenoprotein SelK_SelG ResB PF05140.14 NODE_75649_length_208_cov_95.774566_g67708_i0forward_frame_1 - 0.24 10.1 0.0 0.26 10.0 0.0 1.0 1 0 0 1 1 1 0 ResB-like family CHASE7 PF17151.4 NODE_75646_length_208_cov_122.722543_g67705_i0reverse_frame_1 - 0.14 11.7 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Periplasmic sensor domain Sporozoite_P67 PF05642.11 NODE_75628_length_208_cov_6129.647399_g67687_i0reverse_frame_1 - 2 6.4 4.5 2.1 6.3 4.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen TDRP PF15683.5 NODE_75628_length_208_cov_6129.647399_g67687_i0forward_frame_1 - 0.009 16.0 0.4 0.011 15.8 0.4 1.0 1 0 0 1 1 1 1 Testis development-related protein UPF0239 PF06783.11 NODE_75628_length_208_cov_6129.647399_g67687_i0forward_frame_1 - 0.059 13.6 1.2 0.069 13.3 1.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) TerC PF03741.16 NODE_75621_length_209_cov_0.810345_g67680_i0reverse_frame_1 - 0.002 17.8 0.0 0.0023 17.7 0.0 1.2 1 0 0 1 1 1 1 Integral membrane protein TerC family R_equi_Vir PF05526.11 NODE_75621_length_209_cov_0.810345_g67680_i0reverse_frame_1 - 0.098 12.5 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 Rhodococcus equi virulence-associated protein DFRP_C PF16543.5 NODE_75614_length_209_cov_0.908046_g67673_i0reverse_frame_1 - 6.5e-10 39.4 4.1 8e-10 39.1 4.1 1.1 1 0 0 1 1 1 1 DRG Family Regulatory Proteins, Tma46 Acid_phosphat_B PF03767.14 NODE_75614_length_209_cov_0.908046_g67673_i0reverse_frame_1 - 0.0077 15.8 0.2 0.0086 15.7 0.2 1.0 1 0 0 1 1 1 1 HAD superfamily, subfamily IIIB (Acid phosphatase) Acetyltransf_16 PF05301.11 NODE_75604_length_209_cov_0.913793_g67663_i0reverse_frame_1 - 0.00033 20.5 0.0 0.00034 20.4 0.0 1.0 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 RANK_CRD_2 PF18278.1 NODE_75601_length_209_cov_0.913793_g67660_i0forward_frame_1 - 9.4 6.5 7.8 3.3 7.9 0.3 2.2 2 0 0 2 2 2 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 ACOX PF01756.19 NODE_75595_length_209_cov_0.919540_g67654_i0reverse_frame_1 - 0.007 15.9 0.1 0.0074 15.9 0.1 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase zf-C6H2 PF15801.5 NODE_75594_length_209_cov_0.919540_g67653_i0reverse_frame_1 - 0.026 14.8 0.6 0.038 14.3 0.6 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding Ald_Xan_dh_C2 PF02738.18 NODE_75584_length_209_cov_0.919540_g67643_i0forward_frame_1 - 0.13 10.7 0.2 0.14 10.6 0.2 1.0 1 0 0 1 1 1 0 Molybdopterin-binding domain of aldehyde dehydrogenase ATP-synt_S1 PF05827.12 NODE_75582_length_209_cov_0.919540_g67641_i0forward_frame_1 - 0.098 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) Phage_holin_3_6 PF07332.11 NODE_75581_length_209_cov_0.919540_g67640_i0forward_frame_1 - 0.37 10.8 11.6 0.46 10.5 11.6 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4191 PF13829.6 NODE_75581_length_209_cov_0.919540_g67640_i0forward_frame_1 - 4.1 6.7 10.3 4.6 6.5 10.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) MRP_L53 PF10780.9 NODE_75579_length_209_cov_0.919540_g67638_i0reverse_frame_1 - 0.1 12.8 0.3 0.16 12.2 0.1 1.5 2 0 0 2 2 2 0 39S ribosomal protein L53/MRP-L53 DUF5351 PF17302.2 NODE_75572_length_209_cov_0.919540_g67631_i0forward_frame_1 - 0.00051 20.2 2.6 0.024 14.8 0.3 2.6 2 1 0 2 2 2 2 Family of unknown function (DUF5351) cNMP_binding PF00027.29 NODE_75570_length_209_cov_0.948276_g67629_i0forward_frame_1 - 0.00015 21.8 0.0 0.0002 21.4 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Phage_Coat_Gp8 PF05371.12 NODE_75567_length_209_cov_0.977011_g67626_i0forward_frame_1 - 0.17 11.7 0.1 0.24 11.2 0.1 1.2 1 0 0 1 1 1 0 Phage major coat protein, Gp8 Abhydro_lipase PF04083.16 NODE_75548_length_209_cov_1.103448_g67607_i0forward_frame_1 - 0.22 11.2 0.2 0.22 11.2 0.2 1.4 2 0 0 2 2 2 0 Partial alpha/beta-hydrolase lipase region Lamprin PF06403.11 NODE_75546_length_209_cov_1.103448_g67605_i0reverse_frame_1 - 0.017 15.1 0.8 0.018 15.0 0.8 1.1 1 0 0 1 1 1 0 Lamprin DUF2501 PF10696.9 NODE_75544_length_209_cov_1.132184_g67603_i0forward_frame_1 - 0.03 14.6 0.0 0.037 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2501) Glyco_tranf_2_5 PF13712.6 NODE_75542_length_209_cov_1.137931_g67601_i0reverse_frame_1 - 0.049 13.3 0.1 0.049 13.3 0.1 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family Med13_C PF06333.12 NODE_75539_length_209_cov_1.143678_g67598_i0reverse_frame_1 - 0.063 12.5 0.1 0.069 12.4 0.1 1.0 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain Kelch_1 PF01344.25 NODE_75533_length_209_cov_1.149425_g67592_i0reverse_frame_1 - 0.0026 17.3 0.1 0.0093 15.5 0.2 1.8 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 NODE_75533_length_209_cov_1.149425_g67592_i0reverse_frame_1 - 0.12 12.7 0.1 0.39 11.1 0.1 1.8 2 0 0 2 2 2 0 Kelch motif Integrin_b_cyt PF08725.11 NODE_75533_length_209_cov_1.149425_g67592_i0forward_frame_1 - 0.13 11.9 0.1 0.19 11.4 0.1 1.2 1 0 0 1 1 1 0 Integrin beta cytoplasmic domain DUF4220 PF13968.6 NODE_75529_length_209_cov_1.166667_g67588_i0forward_frame_1 - 0.028 13.8 0.0 0.029 13.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) Plasmod_MYXSPDY PF07981.11 NODE_75521_length_209_cov_1.252874_g67580_i0forward_frame_1 - 5.4 7.2 5.6 22 5.2 0.0 3.6 4 0 0 4 4 4 0 Plasmodium repeat_MYXSPDY FERM_f0 PF16511.5 NODE_75518_length_209_cov_1.270115_g67577_i0forward_frame_1 - 0.041 14.2 0.1 0.064 13.6 0.1 1.3 1 1 0 1 1 1 0 N-terminal or F0 domain of Talin-head FERM RTTN_N PF14726.6 NODE_75502_length_209_cov_1.373563_g67561_i0reverse_frame_1 - 0.035 14.9 1.3 0.04 14.7 1.3 1.0 1 0 0 1 1 1 0 Rotatin, an armadillo repeat protein, centriole functioning tRNA-synt_2 PF00152.20 NODE_75498_length_209_cov_1.379310_g67557_i0forward_frame_1 - 0.078 12.0 0.0 0.086 11.9 0.0 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) Phage_Orf51 PF06194.11 NODE_75494_length_209_cov_1.379310_g67553_i0forward_frame_1 - 0.027 14.5 0.0 0.037 14.0 0.0 1.2 1 0 0 1 1 1 0 Phage Conserved Open Reading Frame 51 RMI1_N PF08585.12 NODE_75490_length_209_cov_1.379310_g67549_i0reverse_frame_1 - 3.2e-10 40.1 0.0 3.6e-10 40.0 0.0 1.0 1 0 0 1 1 1 1 RecQ mediated genome instability protein GCV_T_C PF08669.11 NODE_75485_length_209_cov_1.379310_g67544_i0forward_frame_1 - 0.041 13.8 0.3 0.059 13.3 0.3 1.2 1 0 0 1 1 1 0 Glycine cleavage T-protein C-terminal barrel domain HSP90 PF00183.18 NODE_75484_length_209_cov_1.379310_g67543_i0reverse_frame_1 - 0.054 12.4 0.0 0.059 12.3 0.0 1.0 1 0 0 1 1 1 0 Hsp90 protein Macscav_rec PF03523.13 NODE_75483_length_209_cov_1.385057_g67542_i0reverse_frame_1 - 0.082 12.8 0.0 0.15 11.9 0.0 1.5 1 1 0 1 1 1 0 Macrophage scavenger receptor SBP PF03110.14 NODE_75481_length_209_cov_1.402299_g67540_i0reverse_frame_1 - 0.11 12.8 3.0 0.19 12.0 0.1 2.0 1 1 1 2 2 2 0 SBP domain Pox_A12 PF04651.13 NODE_75481_length_209_cov_1.402299_g67540_i0forward_frame_1 - 0.044 13.8 1.7 0.045 13.8 1.7 1.2 1 0 0 1 1 1 0 Poxvirus A12 protein IF4E PF01652.18 NODE_75481_length_209_cov_1.402299_g67540_i0forward_frame_1 - 0.055 13.3 0.1 0.06 13.1 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic initiation factor 4E OrfB_IS605 PF01385.19 NODE_75471_length_209_cov_1.448276_g67530_i0reverse_frame_1 - 1.9 8.7 5.7 2.1 8.6 5.7 1.0 1 0 0 1 1 1 0 Probable transposase Lactamase_B PF00753.27 NODE_75451_length_209_cov_1.580460_g67510_i0forward_frame_1 - 0.038 14.0 0.0 0.042 13.8 0.0 1.0 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily MHC_I_3 PF16497.5 NODE_75450_length_209_cov_1.586207_g67509_i0reverse_frame_1 - 0.065 12.7 0.1 0.069 12.6 0.1 1.0 1 0 0 1 1 1 0 MHC-I family domain DUF1190 PF06693.11 NODE_75440_length_209_cov_1.609195_g67499_i0reverse_frame_1 - 0.066 13.6 0.0 0.083 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1190) Lamprin PF06403.11 NODE_75438_length_209_cov_1.626437_g67497_i0forward_frame_1 - 0.054 13.5 4.2 0.066 13.2 4.2 1.2 1 0 0 1 1 1 0 Lamprin Syntaxin-6_N PF09177.11 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.0022 18.5 0.6 0.0023 18.4 0.6 1.0 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DivIC PF04977.15 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.013 15.2 5.0 0.019 14.7 5.0 1.3 1 0 0 1 1 1 0 Septum formation initiator GrpE PF01025.19 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.014 15.0 1.5 0.014 15.0 1.5 1.1 1 0 0 1 1 1 0 GrpE KAP_NTPase PF07693.14 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.028 13.7 0.4 0.029 13.6 0.4 1.0 1 0 0 1 1 1 0 KAP family P-loop domain Fib_alpha PF08702.10 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.044 14.0 1.3 0.05 13.8 1.3 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family AMH_N PF04709.12 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.069 12.0 0.7 0.076 11.9 0.7 1.0 1 0 0 1 1 1 0 Anti-Mullerian hormone, N terminal region DUF848 PF05852.11 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.071 13.2 3.4 0.077 13.1 3.4 1.0 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) CCDC-167 PF15188.6 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 2.8 8.4 8.2 5.3 7.5 1.5 2.0 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 UPF0051 PF01458.17 NODE_75430_length_209_cov_1.706897_g67489_i0forward_frame_1 - 1.2e-17 64.4 0.3 1.2e-17 64.3 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Nsp1_C PF05064.13 NODE_75422_length_209_cov_1.752874_g67481_i0forward_frame_1 - 0.015 15.1 2.4 0.2 11.5 0.5 2.0 1 1 1 2 2 2 0 Nsp1-like C-terminal region DUF4527 PF15030.6 NODE_75410_length_209_cov_1.816092_g67469_i0forward_frame_1 - 0.016 14.6 0.2 0.018 14.5 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) ADH_N_assoc PF13823.6 NODE_75408_length_209_cov_1.821839_g67467_i0forward_frame_1 - 0.3 11.0 1.8 0.49 10.4 1.8 1.3 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-associated PEP-CTERM PF07589.11 NODE_75404_length_209_cov_1.844828_g67463_i0reverse_frame_1 - 1.2 9.3 6.2 0.49 10.6 2.1 2.1 2 0 0 2 2 2 0 PEP-CTERM motif DUF1409 PF07197.12 NODE_75392_length_209_cov_1.925287_g67451_i0forward_frame_1 - 0.022 14.6 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1409) Imm43 PF15570.6 NODE_75391_length_209_cov_1.931034_g67450_i0reverse_frame_1 - 0.081 13.0 1.0 0.12 12.4 0.5 1.5 1 1 1 2 2 2 0 Immunity protein 43 DUF4774 PF15999.5 NODE_75390_length_209_cov_1.936782_g67449_i0forward_frame_1 - 0.042 13.7 0.3 0.063 13.1 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4774) zf-UBP_var PF17807.1 NODE_75375_length_209_cov_2.097701_g67434_i0forward_frame_1 - 0.16 11.7 1.1 0.25 11.1 0.2 1.6 2 0 0 2 2 2 0 Variant UBP zinc finger LMWPc PF01451.21 NODE_75362_length_209_cov_2.275862_g67421_i0reverse_frame_1 - 5.3e-06 26.9 0.0 6.9e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase zf-P11 PF03854.14 NODE_75360_length_209_cov_2.293103_g67419_i0reverse_frame_1 - 0.063 13.0 0.7 0.12 12.0 0.0 1.7 2 0 0 2 2 2 0 P-11 zinc finger WGR PF05406.15 NODE_75357_length_209_cov_2.339080_g67416_i0reverse_frame_1 - 4.9e-11 42.5 0.2 5.6e-11 42.4 0.2 1.1 1 0 0 1 1 1 1 WGR domain zf-RING_5 PF14634.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 1.7e-07 31.1 8.8 2.2e-07 30.7 8.8 1.1 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 5.7e-06 26.1 7.3 7.9e-06 25.6 7.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 2e-05 24.8 8.0 3.1e-05 24.2 8.0 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.00019 21.4 4.0 0.00037 20.5 4.0 1.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.0028 17.5 10.8 0.0049 16.7 10.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.016 15.1 7.0 0.035 14.0 7.0 1.5 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.05 13.8 11.5 0.21 11.8 11.6 1.9 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.25 11.2 8.8 0.51 10.2 8.8 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) CHZ PF09649.10 NODE_75347_length_209_cov_2.597701_g67406_i0reverse_frame_1 - 0.19 11.2 3.9 0.4 10.2 0.3 2.1 2 0 0 2 2 2 0 Histone chaperone domain CHZ PDR_CDR PF06422.12 NODE_75347_length_209_cov_2.597701_g67406_i0forward_frame_1 - 0.14 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 CDR ABC transporter HTH_33 PF13592.6 NODE_75346_length_209_cov_2.614943_g67405_i0forward_frame_1 - 0.0077 15.8 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix Motilin_assoc PF04643.12 NODE_75346_length_209_cov_2.614943_g67405_i0forward_frame_1 - 0.026 14.4 0.0 0.038 13.8 0.0 1.2 1 0 0 1 1 1 0 Motilin/ghrelin-associated peptide Extensin-like_C PF06904.12 NODE_75346_length_209_cov_2.614943_g67405_i0forward_frame_1 - 0.054 13.5 0.0 0.061 13.4 0.0 1.0 1 0 0 1 1 1 0 Extensin-like protein C-terminus Sushi_2 PF09014.10 NODE_75341_length_209_cov_2.775862_g67400_i0reverse_frame_1 - 0.11 12.4 1.0 0.14 12.0 1.0 1.1 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain DUF1319 PF07028.11 NODE_75340_length_209_cov_2.810345_g67399_i0forward_frame_1 - 0.0072 16.5 0.4 0.0089 16.2 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1319) Red1 PF07964.11 NODE_75339_length_209_cov_2.821839_g67398_i0forward_frame_1 - 0.075 11.3 0.0 0.083 11.1 0.0 1.0 1 0 0 1 1 1 0 Rec10 / Red1 zf-C3HC4_3 PF13920.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 3.3e-09 36.5 9.5 3.3e-09 36.5 9.5 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 4e-06 26.6 13.7 1e-05 25.3 12.0 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 1.4e-05 25.3 11.9 1.4e-05 25.3 11.9 1.6 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.00019 21.2 11.5 0.00081 19.2 9.9 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.0076 16.2 13.9 0.0091 15.9 5.3 2.4 2 1 0 2 2 2 2 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.052 13.4 13.8 0.28 11.1 12.8 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.22 11.3 13.4 10 6.0 13.0 2.2 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.96 9.7 11.5 0.91 9.7 8.3 2.4 2 1 1 3 3 3 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 1.1 9.3 12.4 0.86 9.7 3.6 3.1 3 1 0 3 3 3 0 RING-type zinc-finger SWIRM-assoc_2 PF16496.5 NODE_75315_length_209_cov_18.603448_g67374_i0forward_frame_1 - 0.4 9.5 11.4 0.41 9.5 11.4 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal UPF0767 PF15990.5 NODE_75315_length_209_cov_18.603448_g67374_i0forward_frame_1 - 1.8 8.8 5.9 39 4.5 5.9 2.0 1 1 0 1 1 1 0 UPF0767 family TPR_7 PF13176.6 NODE_75313_length_209_cov_27.189655_g67372_i0forward_frame_1 - 0.038 14.0 0.2 0.2 11.8 0.1 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat DUF4337 PF14235.6 NODE_75313_length_209_cov_27.189655_g67372_i0forward_frame_1 - 7.8 6.6 10.2 8.5 6.5 10.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) UXS1_N PF11803.8 NODE_75311_length_209_cov_27.770115_g67370_i0reverse_frame_1 - 0.055 13.8 0.0 0.062 13.7 0.0 1.1 1 0 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal DUF3437 PF11919.8 NODE_75298_length_209_cov_39.201149_g67357_i0reverse_frame_1 - 0.18 11.8 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) HicB-like_2 PF15970.5 NODE_75298_length_209_cov_39.201149_g67357_i0forward_frame_1 - 0.053 13.7 0.2 0.053 13.7 0.2 1.1 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system ARL17 PF15840.5 NODE_75297_length_209_cov_39.408046_g67356_i0reverse_frame_1 - 0.67 10.4 5.7 0.47 10.8 3.9 1.6 1 1 1 2 2 2 0 ADP-ribosylation factor-like protein 17 NUDIX_5 PF16705.5 NODE_75294_length_209_cov_44.097701_g67353_i0reverse_frame_1 - 0.054 13.3 0.9 0.08 12.7 0.9 1.3 1 0 0 1 1 1 0 NUDIX, or N-terminal NPxY motif-rich, region of KRIT NinF PF05810.12 NODE_75285_length_209_cov_52.086207_g67344_i0reverse_frame_1 - 0.0085 15.9 0.1 0.01 15.7 0.1 1.2 1 0 0 1 1 1 1 NinF protein YqgC PF17430.2 NODE_75284_length_209_cov_52.218391_g67343_i0forward_frame_1 - 0.079 13.0 0.1 0.097 12.8 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized YqgC-like THDPS_M PF14789.6 NODE_75283_length_209_cov_52.488506_g67342_i0reverse_frame_1 - 0.16 12.1 0.0 1.3 9.2 0.0 2.2 1 1 0 1 1 1 0 Tetrahydrodipicolinate N-succinyltransferase middle DUF4618 PF15397.6 NODE_75282_length_209_cov_52.919540_g67341_i0reverse_frame_1 - 0.46 9.9 11.2 0.26 10.7 3.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) SID-1_RNA_chan PF13965.6 NODE_75282_length_209_cov_52.919540_g67341_i0reverse_frame_1 - 0.51 8.7 4.3 0.54 8.6 4.3 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 FadR_C PF07840.12 NODE_75270_length_209_cov_68.465517_g67329_i0forward_frame_1 - 0.093 12.6 1.1 0.1 12.5 1.1 1.1 1 0 0 1 1 1 0 FadR C-terminal domain Ada3 PF10198.9 NODE_75264_length_209_cov_81.442529_g67323_i0forward_frame_1 - 0.056 13.6 4.3 0.063 13.4 4.3 1.1 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 NVEALA PF14055.6 NODE_75263_length_209_cov_84.149425_g67322_i0reverse_frame_1 - 0.18 11.8 0.1 0.27 11.3 0.1 1.2 1 0 0 1 1 1 0 NVEALA protein DUF5074 PF16819.5 NODE_75256_length_209_cov_145.948276_g67315_i0reverse_frame_1 - 0.055 13.5 0.1 0.061 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5074) PHD_2 PF13831.6 NODE_75255_length_209_cov_150.172414_g67314_i0forward_frame_1 - 0.019 14.5 0.0 0.041 13.4 0.0 1.6 1 0 0 1 1 1 0 PHD-finger PHD PF00628.29 NODE_75255_length_209_cov_150.172414_g67314_i0forward_frame_1 - 0.03 14.2 0.8 0.043 13.7 0.8 1.4 1 1 0 1 1 1 0 PHD-finger HRM PF02793.22 NODE_75251_length_209_cov_225.011494_g67310_i0forward_frame_1 - 0.011 16.0 1.7 0.017 15.4 1.5 1.3 1 1 0 1 1 1 0 Hormone receptor domain FixP_N PF14715.6 NODE_75241_length_209_cov_28542.275862_g67300_i0forward_frame_1 - 3.2 7.5 6.7 1.1 9.1 1.2 2.1 1 1 1 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Cas_Cmr3 PF09700.10 NODE_75231_length_210_cov_0.902857_g67290_i0forward_frame_1 - 0.058 12.8 0.1 0.07 12.5 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr3) DUF3915 PF13054.6 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_1 - 0.11 12.4 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) BES1_N PF05687.13 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_1 - 0.23 11.8 1.0 0.27 11.6 1.0 1.1 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal Atrophin-1 PF03154.15 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_1 - 3.4 5.8 3.8 4.1 5.6 3.8 1.0 1 0 0 1 1 1 0 Atrophin-1 family GP63 PF17471.2 NODE_75207_length_210_cov_0.920000_g67266_i0reverse_frame_1 - 0.13 12.4 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Gene product 63 PMBR PF09373.10 NODE_75206_length_210_cov_0.931429_g67265_i0forward_frame_1 - 0.041 14.0 0.4 0.094 12.9 0.1 1.8 2 0 0 2 2 2 0 Pseudomurein-binding repeat DUF4609 PF15382.6 NODE_75201_length_210_cov_0.994286_g67260_i0reverse_frame_1 - 0.091 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4609) TRAP_beta PF05753.14 NODE_75197_length_210_cov_1.051429_g67256_i0forward_frame_1 - 0.16 11.4 1.1 0.21 11.0 1.1 1.0 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) Tmemb_9 PF05434.11 NODE_75197_length_210_cov_1.051429_g67256_i0forward_frame_1 - 0.35 10.7 1.6 0.41 10.5 1.6 1.1 1 0 0 1 1 1 0 TMEM9 NUDIX_4 PF14815.6 NODE_75194_length_210_cov_1.062857_g67253_i0forward_frame_1 - 0.12 12.3 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 NUDIX domain Mt_ATP-synt_D PF05873.12 NODE_75186_length_210_cov_1.102857_g67245_i0reverse_frame_1 - 0.0027 17.6 1.8 0.003 17.4 1.8 1.0 1 0 0 1 1 1 1 ATP synthase D chain, mitochondrial (ATP5H) TMEM169 PF15052.6 NODE_75179_length_210_cov_1.142857_g67238_i0forward_frame_1 - 0.21 11.7 4.7 0.25 11.5 4.7 1.1 1 0 0 1 1 1 0 TMEM169 protein family Nudix_N_2 PF14803.6 NODE_75177_length_210_cov_1.142857_g67236_i0reverse_frame_1 - 0.083 12.8 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Nudix N-terminal TcA_TcB_BD PF18276.1 NODE_75172_length_210_cov_1.142857_g67231_i0forward_frame_1 - 0.027 13.5 0.0 0.029 13.5 0.0 1.0 1 0 0 1 1 1 0 Tc toxin complex TcA C-terminal TcB-binding domain Peptidase_C97 PF05903.14 NODE_75169_length_210_cov_1.142857_g67228_i0reverse_frame_1 - 0.0084 15.9 0.1 0.0088 15.9 0.1 1.1 1 0 0 1 1 1 1 PPPDE putative peptidase domain Effector_1 PF04518.12 NODE_75169_length_210_cov_1.142857_g67228_i0forward_frame_1 - 0.23 10.6 0.7 0.24 10.4 0.7 1.0 1 0 0 1 1 1 0 Effector from type III secretion system DUF444 PF04285.12 NODE_75163_length_210_cov_1.211429_g67222_i0reverse_frame_1 - 1.1e-17 64.3 0.2 1.1e-17 64.2 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF444) Stk19 PF10494.9 NODE_75160_length_210_cov_1.228571_g67219_i0forward_frame_1 - 0.091 12.4 0.0 0.091 12.4 0.0 1.0 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 LisH PF08513.11 NODE_75158_length_210_cov_1.245714_g67217_i0reverse_frame_1 - 0.16 12.0 0.4 0.23 11.5 0.4 1.2 1 0 0 1 1 1 0 LisH NDC10_II PF16787.5 NODE_75158_length_210_cov_1.245714_g67217_i0forward_frame_1 - 0.21 10.6 0.1 0.23 10.5 0.1 1.0 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit, domain 2 Rubella_Capsid PF05750.11 NODE_75157_length_210_cov_1.257143_g67216_i0reverse_frame_1 - 0.58 9.7 8.9 0.64 9.6 8.9 1.0 1 0 0 1 1 1 0 Rubella capsid protein Mob_Pre PF01076.19 NODE_75156_length_210_cov_1.262857_g67215_i0reverse_frame_1 - 0.024 14.5 0.6 0.027 14.3 0.6 1.0 1 0 0 1 1 1 0 Plasmid recombination enzyme DUF1658 PF07871.11 NODE_75150_length_210_cov_1.348571_g67209_i0reverse_frame_1 - 0.092 12.7 1.6 4.3 7.4 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) UPA PF17217.3 NODE_75146_length_210_cov_1.360000_g67205_i0forward_frame_1 - 0.091 12.7 0.0 0.094 12.6 0.0 1.1 1 0 0 1 1 1 0 UPA domain Pkinase PF00069.25 NODE_75141_length_210_cov_1.365714_g67200_i0reverse_frame_1 - 7.6e-13 48.4 0.0 8.1e-13 48.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_75141_length_210_cov_1.365714_g67200_i0reverse_frame_1 - 1.3e-05 24.6 0.0 1.4e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase polyprenyl_synt PF00348.17 NODE_75137_length_210_cov_1.371429_g67196_i0reverse_frame_1 - 3.6e-16 59.0 0.3 3.8e-16 58.9 0.3 1.0 1 0 0 1 1 1 1 Polyprenyl synthetase DUF1700 PF08006.11 NODE_75135_length_210_cov_1.371429_g67194_i0forward_frame_1 - 0.53 9.8 12.6 0.57 9.7 12.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF4992 PF16383.5 NODE_75126_length_210_cov_1.371429_g67185_i0forward_frame_1 - 0.14 11.7 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function Cnd1 PF12717.7 NODE_75117_length_210_cov_1.445714_g67176_i0forward_frame_1 - 1.4e-07 31.7 0.8 1.6e-07 31.5 0.8 1.0 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 eIF3_subunit PF08597.10 NODE_75117_length_210_cov_1.445714_g67176_i0forward_frame_1 - 0.0024 17.8 1.0 0.0026 17.7 1.0 1.0 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit DUF4803 PF16061.5 NODE_75117_length_210_cov_1.445714_g67176_i0forward_frame_1 - 0.011 15.2 0.5 0.012 15.1 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4803) SapB_1 PF05184.15 NODE_75117_length_210_cov_1.445714_g67176_i0forward_frame_1 - 0.27 11.3 6.9 0.28 11.3 2.9 2.7 2 1 0 2 2 2 0 Saposin-like type B, region 1 Urocanase PF01175.18 NODE_75116_length_210_cov_1.445714_g67175_i0reverse_frame_1 - 0.091 12.4 0.0 0.091 12.4 0.0 1.1 1 0 0 1 1 1 0 Urocanase Rossmann-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks349.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks349.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks349.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks349.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CdiI PF07262.11 ORF80213 - 0.015 15.1 0.2 0.015 15.1 0.2 1.9 2 0 0 2 2 2 0 CDI immunity protein Neisseria_TspB PF05616.13 ORF80213 - 0.06 11.8 1.0 0.93 7.9 0.2 2.1 2 0 0 2 2 2 0 Neisseria meningitidis TspB protein DUF3498 PF12004.8 ORF76364 - 0.068 12.4 0.1 0.096 11.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) PilJ PF13675.6 ORF71341 - 0.0036 17.3 1.1 0.21 11.6 0.0 3.3 2 1 1 3 3 3 1 Type IV pili methyl-accepting chemotaxis transducer N-term DUF445 PF04286.12 ORF71341 - 0.0048 16.8 1.3 0.011 15.6 1.0 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF445) Lebercilin PF15619.6 ORF71341 - 0.0059 16.3 2.4 0.0059 16.3 2.4 2.5 3 1 0 3 3 3 1 Ciliary protein causing Leber congenital amaurosis disease DUF745 PF05335.13 ORF71341 - 0.016 14.9 18.2 0.11 12.2 5.8 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF745) HSL_N PF06350.12 ORF71341 - 0.029 13.4 1.1 0.15 11.0 0.5 2.1 1 1 1 2 2 2 0 Hormone-sensitive lipase (HSL) N-terminus Rhodanese PF00581.20 ORF69022 - 3e-08 34.1 0.0 5.9e-08 33.2 0.0 1.5 1 0 0 1 1 1 1 Rhodanese-like domain Aminotran_5 PF00266.19 ORF68636 - 1.4e-46 159.2 0.0 1.6e-46 159.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V TPT PF03151.16 ORF64872 - 1.3e-35 123.2 12.7 1.6e-35 122.9 12.7 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family UAA PF08449.11 ORF64872 - 8.8e-11 41.5 16.8 9.4e-11 41.5 15.5 1.6 1 1 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF64872 - 9.3e-10 38.8 25.9 4.9e-05 23.5 4.3 3.0 2 2 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 ORF64872 - 0.062 13.3 3.6 0.091 12.8 0.2 2.4 2 0 0 2 2 2 0 Putative transmembrane family 234 EF-hand_6 PF13405.6 ORF54100 - 4.7e-18 63.5 7.7 3.4e-05 23.4 0.0 6.4 6 0 0 6 6 6 5 EF-hand domain EF-hand_7 PF13499.6 ORF54100 - 4.4e-17 62.3 6.8 1.2e-06 28.9 0.0 4.0 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF54100 - 1.5e-15 55.4 7.4 3.6e-05 23.0 0.0 6.1 6 0 0 6 6 6 4 EF hand EF-hand_5 PF13202.6 ORF54100 - 2.3e-06 26.9 3.8 1.2e-05 24.5 0.1 3.1 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF54100 - 2.3e-06 27.4 8.8 0.018 14.9 0.1 4.6 4 1 1 5 5 5 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF54100 - 0.00019 21.7 0.5 0.0083 16.4 0.0 2.6 2 1 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF54100 - 0.00065 19.6 8.6 4.4 7.3 0.1 5.2 2 2 4 6 6 6 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF54100 - 0.011 16.1 0.6 1.5 9.2 0.0 2.6 2 0 0 2 2 2 0 EF-hand domain Lzipper-MIP1 PF14389.6 ORF54100 - 0.024 15.0 1.3 0.36 11.1 0.2 2.6 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 Toprim PF01751.22 ORF54100 - 0.17 12.1 0.0 11 6.4 0.0 2.3 2 0 0 2 2 2 0 Toprim domain adh_short PF00106.25 ORF54030 - 7.9e-21 74.4 1.1 7.1e-12 45.2 0.1 3.2 2 1 1 3 3 3 3 short chain dehydrogenase adh_short_C2 PF13561.6 ORF54030 - 9e-10 38.5 5.6 8.7e-09 35.3 0.2 2.8 2 1 1 3 3 3 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF54030 - 6.5e-06 26.2 2.2 6.5e-06 26.2 2.2 1.9 2 1 0 2 2 2 1 KR domain DUF4158 PF13700.6 ORF54030 - 0.037 13.9 0.2 0.072 12.9 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) Shikimate_DH PF01488.20 ORF54030 - 0.1 12.7 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF5617 PF18493.1 ORF51897 - 0.85 9.8 4.5 0.65 10.1 0.7 2.7 3 1 0 3 3 3 0 Domain of unknown function (DUF5617) ADH_N PF08240.12 ORF5139 - 1.8e-21 76.1 0.2 2.9e-21 75.4 0.2 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF5139 - 1.6e-19 70.2 0.1 2.7e-19 69.4 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF5139 - 0.0043 18.1 0.0 0.025 15.6 0.0 2.2 2 1 0 2 2 2 1 Zinc-binding dehydrogenase GTP_cyclohydro2 PF00925.20 ORF49499 - 1.2e-53 181.1 0.0 1.9e-53 180.4 0.0 1.2 1 0 0 1 1 1 1 GTP cyclohydrolase II DMRL_synthase PF00885.19 ORF49499 - 2.8e-30 105.0 0.0 4.4e-30 104.4 0.0 1.3 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Tudor_4 PF18358.1 ORF46532 - 0.082 12.5 0.3 7.9 6.2 0.0 2.5 2 0 0 2 2 2 0 Histone methyltransferase Tudor domain ESPR PF13018.6 ORF46532 - 0.15 11.9 0.3 0.4 10.5 0.3 1.8 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system Acyltransferase PF01553.21 ORF38596 - 8.7e-06 25.4 0.0 1.4e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Acyltransferase EF-hand_1 PF00036.32 ORF38596 - 1.3e-05 24.4 0.1 0.023 14.2 0.0 3.9 4 0 0 4 4 4 2 EF hand EF-hand_8 PF13833.6 ORF38596 - 6.3e-05 22.7 0.2 0.14 12.1 0.0 3.5 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF38596 - 7.8e-05 23.1 0.5 0.0088 16.5 0.0 2.6 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF38596 - 9.8e-05 22.0 0.2 0.044 13.7 0.0 3.3 3 1 0 3 3 3 1 EF-hand domain Asp_Glu_race PF01177.22 ORF36040 - 0.13 12.1 0.1 0.41 10.5 0.1 1.8 1 1 0 1 1 1 0 Asp/Glu/Hydantoin racemase zf-RING-like PF08746.11 ORF36040 - 0.38 11.1 1.3 0.57 10.5 0.0 1.9 2 0 0 2 2 2 0 RING-like domain MFS_1 PF07690.16 ORF31373 - 4.9e-20 71.8 41.8 5.5e-14 51.9 23.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF31373 - 4.5e-09 36.1 14.8 7.4e-09 35.4 14.8 1.3 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MARVEL PF01284.23 ORF31373 - 0.00042 20.4 0.8 0.00042 20.4 0.8 3.9 2 2 2 4 4 4 1 Membrane-associating domain ATG22 PF11700.8 ORF31373 - 0.87 8.1 7.2 0.044 12.4 0.7 2.1 2 1 1 3 3 3 0 Vacuole effluxer Atg22 like DUF1275 PF06912.11 ORF28156 - 2.9e-25 89.3 13.0 3.6e-25 89.0 13.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Ank_2 PF12796.7 ORF25099 - 1.1e-14 54.8 0.0 1.8e-14 54.1 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF25099 - 3.9e-13 48.3 0.0 2.3e-05 24.4 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF25099 - 2e-12 47.4 0.0 1.8e-06 28.4 0.0 2.6 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF25099 - 3.5e-12 46.3 0.0 2.9e-05 24.2 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_1 PF00583.25 ORF25099 - 2.5e-10 40.6 0.0 6.9e-10 39.2 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF25099 - 1e-08 35.2 0.0 1.9e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ank PF00023.30 ORF25099 - 1.9e-08 34.3 0.0 0.0039 17.6 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_7 PF13508.7 ORF25099 - 7.3e-06 26.3 0.0 1.7e-05 25.1 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF25099 - 0.00013 21.9 0.0 0.00029 20.7 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 ORF25099 - 0.0059 16.7 0.0 0.012 15.7 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase CxC6 PF18721.1 ORF25099 - 0.078 13.3 1.7 0.26 11.6 1.7 1.8 1 0 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases DUF5617 PF18493.1 ORF24744 - 0.85 9.8 4.5 0.65 10.1 0.7 2.7 3 1 0 3 3 3 0 Domain of unknown function (DUF5617) COX1 PF00115.20 ORF14905 - 7.9e-78 262.2 35.7 9.4e-78 262.0 35.7 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Ammonium_transp PF00909.21 ORF12013 - 1.5e-47 162.2 13.3 1.8e-47 161.9 13.3 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF5609 PF18429.1 ORF11116 - 1.9e-25 88.4 0.1 4.1e-25 87.3 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5609) HAD PF12710.7 ORF11116 - 1.1e-18 68.3 0.0 2e-18 67.5 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF11116 - 1.8e-14 54.1 0.0 4.8e-13 49.4 0.0 2.3 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF11116 - 2e-14 54.4 0.9 3.4e-14 53.6 0.7 1.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 ORF11116 - 0.00026 20.5 0.0 0.0032 16.9 0.0 2.0 2 0 0 2 2 2 1 Putative Phosphatase S6PP PF05116.13 ORF11116 - 0.0059 16.2 0.0 0.015 14.9 0.0 1.6 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase DnaJ PF00226.31 ORF109473 - 1.5e-05 25.0 0.0 1.5e-05 25.0 0.0 2.3 2 1 0 2 2 2 1 DnaJ domain DUF1541 PF07563.11 ORF109473 - 0.025 14.4 0.2 0.025 14.4 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1541) Elongin_A PF06881.11 ORF109473 - 0.066 13.8 5.4 0.15 12.6 4.7 2.0 2 0 0 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A Cellulose_synt PF03552.14 ORF109473 - 0.63 8.5 4.0 1.1 7.7 4.0 1.4 1 0 0 1 1 1 0 Cellulose synthase zf_PR_Knuckle PF18445.1 ORF109473 - 0.9 9.4 4.3 25 4.8 0.1 2.5 2 0 0 2 2 2 0 PR zinc knuckle motif HipA_C PF07804.12 NODE_16224_length_1102_cov_2.445173_g12323_i0forward_frame_2 - 3.1e-46 157.7 0.0 4.8e-46 157.1 0.0 1.2 1 0 0 1 1 1 1 HipA-like C-terminal domain Couple_hipA PF13657.6 NODE_16224_length_1102_cov_2.445173_g12323_i0forward_frame_2 - 6.2e-25 87.7 0.0 1.1e-24 87.0 0.0 1.4 1 0 0 1 1 1 1 HipA N-terminal domain Exo_endo_phos PF03372.23 ORF99792 - 0.049 13.1 0.8 0.16 11.4 0.8 1.9 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family FMO-like PF00743.19 ORF94428 - 1.2e-31 109.7 0.0 2e-24 86.0 0.0 2.0 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF94428 - 7.5e-13 48.4 0.0 5.6e-11 42.2 0.0 2.8 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF94428 - 8.4e-08 31.7 0.1 1.2e-06 28.0 0.0 2.1 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 ORF94428 - 0.00012 21.4 0.0 0.0027 17.0 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_C PF03720.15 ORF94428 - 0.21 12.0 0.0 30 5.1 0.0 2.3 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ELFV_dehydrog_N PF02812.18 ORF63790 - 1.4e-50 170.5 0.0 2.3e-50 169.8 0.0 1.3 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ELFV_dehydrog PF00208.21 ORF63790 - 4.4e-28 98.6 0.0 6.6e-28 98.1 0.0 1.3 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ApbA PF02558.16 ORF63790 - 0.004 16.8 0.0 0.0061 16.2 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA p450 PF00067.22 ORF62989 - 4.1e-19 68.7 1.7 5.3e-19 68.3 1.7 1.1 1 0 0 1 1 1 1 Cytochrome P450 Exo_endo_phos PF03372.23 ORF60867 - 0.049 13.1 0.8 0.16 11.4 0.8 1.9 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family MIR PF02815.19 ORF55908 - 0.00064 19.6 0.1 0.0059 16.5 0.0 2.3 1 1 0 1 1 1 1 MIR domain PHTB1_C PF14728.6 ORF54281 - 3e-67 227.4 0.3 3.7e-67 227.1 0.3 1.1 1 0 0 1 1 1 1 PTHB1 C-terminus TPR_12 PF13424.6 ORF50544 - 7.8e-13 48.5 10.6 1.9e-07 31.3 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat zf-RING_2 PF13639.6 ORF50544 - 3.6e-12 46.4 5.0 6.3e-12 45.6 5.0 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF50544 - 1.8e-08 34.0 2.3 4.7e-08 32.6 2.3 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF50544 - 3.5e-07 30.0 5.6 6.4e-07 29.1 5.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF50544 - 5.6e-07 29.5 2.1 1.2e-06 28.5 2.1 1.6 1 0 0 1 1 1 1 RING-type zinc-finger TPR_MalT PF17874.1 ORF50544 - 7.9e-07 28.8 8.9 0.016 14.6 0.0 3.1 1 1 2 3 3 3 2 MalT-like TPR region zf-rbx1 PF12678.7 ORF50544 - 8.3e-07 29.2 4.9 3.3e-06 27.3 4.9 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF50544 - 8.6e-07 28.8 4.8 1.5e-06 28.1 4.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF50544 - 9e-07 28.6 4.3 1.8e-06 27.6 4.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) TPR_7 PF13176.6 ORF50544 - 3.8e-06 26.5 1.5 0.4 10.8 0.1 4.8 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF50544 - 1.2e-05 25.1 11.3 1.3 9.3 0.0 5.4 6 0 0 6 6 5 2 Tetratricopeptide repeat zf-C3HC4_3 PF13920.6 ORF50544 - 1.5e-05 24.7 2.8 2.7e-05 23.9 2.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF50544 - 2.4e-05 24.3 2.1 8.6e-05 22.5 2.1 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger TPR_10 PF13374.6 ORF50544 - 6.5e-05 22.7 0.4 21 5.1 0.0 4.6 4 0 0 4 4 4 0 Tetratricopeptide repeat zf-RING_4 PF14570.6 ORF50544 - 0.00021 21.0 2.0 0.00046 19.9 2.0 1.6 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Zn_ribbon_17 PF17120.5 ORF50544 - 0.0007 19.2 3.1 0.0013 18.3 3.1 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF50544 - 0.0039 17.0 3.9 0.0086 15.9 3.9 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 TPR_1 PF00515.28 ORF50544 - 0.0088 15.8 6.0 1.8 8.5 0.1 5.6 5 1 0 5 5 5 1 Tetratricopeptide repeat PHD PF00628.29 ORF50544 - 0.02 14.8 4.4 0.036 14.0 4.4 1.4 1 0 0 1 1 1 0 PHD-finger zf-Nse PF11789.8 ORF50544 - 0.035 13.9 1.0 0.073 12.9 1.0 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 ORF50544 - 0.044 13.9 3.8 0.11 12.7 3.8 1.7 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING ComR_TPR PF18710.1 ORF50544 - 0.045 13.3 0.2 7.2 6.1 0.1 2.7 2 1 1 3 3 3 0 ComR tetratricopeptide DUF1186 PF06685.11 ORF50544 - 0.048 13.0 0.0 0.077 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1186) FANCL_C PF11793.8 ORF50544 - 0.064 13.4 3.2 0.19 11.9 3.2 1.8 1 0 0 1 1 1 0 FANCL C-terminal domain Tai4 PF16695.5 ORF50544 - 0.081 13.5 1.0 0.26 11.8 0.2 2.3 2 0 0 2 2 1 0 Type VI secretion system (T6SS), amidase immunity protein Prok-RING_1 PF14446.6 ORF50544 - 0.12 12.3 3.1 0.84 9.6 0.5 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-RING-like PF08746.11 ORF50544 - 0.83 10.0 4.4 1.7 9.0 4.4 1.6 1 0 0 1 1 1 0 RING-like domain RINGv PF12906.7 ORF50544 - 1.6 8.9 5.5 3.1 8.0 5.5 1.5 1 0 0 1 1 1 0 RING-variant domain C1_1 PF00130.22 ORF50544 - 1.7 8.6 4.5 1.5 8.8 0.8 2.3 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C3H2C3 PF17122.5 ORF50544 - 4.5 7.4 7.3 25 5.0 7.3 2.3 1 1 0 1 1 1 0 Zinc-finger MMR_HSR1_Xtn PF16897.5 ORF48108 - 1e-41 141.2 1.3 1.7e-41 140.5 1.3 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 ORF48108 - 1.9e-19 69.9 0.0 4.3e-19 68.7 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 ORF48108 - 1.1e-17 63.8 0.0 2e-17 62.9 0.0 1.5 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 ORF48108 - 2.4e-09 36.9 0.0 6.6e-09 35.5 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B MeaB PF03308.16 ORF48108 - 0.0096 14.9 0.2 0.031 13.3 0.1 1.8 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Dynamin_N PF00350.23 ORF48108 - 0.023 14.7 0.0 0.37 10.8 0.0 2.2 1 1 1 2 2 2 0 Dynamin family ABC_tran PF00005.27 ORF48108 - 0.077 13.5 0.1 0.43 11.1 0.0 2.1 2 0 0 2 2 2 0 ABC transporter DUF812 PF05667.11 ORF4805 - 0.00076 18.5 30.7 0.0029 16.6 17.8 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF812) Spc7 PF08317.11 ORF4805 - 0.0093 14.9 30.3 0.2 10.5 10.6 2.3 2 0 0 2 2 2 2 Spc7 kinetochore protein Oxidored_q6 PF01058.22 ORF4805 - 0.15 11.9 0.6 0.39 10.5 0.6 1.6 1 0 0 1 1 1 0 NADH ubiquinone oxidoreductase, 20 Kd subunit ATG16 PF08614.11 ORF4805 - 0.56 10.4 30.3 1.4 9.1 15.3 2.4 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) MtrG PF04210.13 ORF4805 - 1.9 8.4 3.8 2 8.3 0.2 2.8 3 1 1 4 4 4 0 Tetrahydromethanopterin S-methyltransferase, subunit G THOC7 PF05615.13 ORF4805 - 6.9 7.0 24.1 0.055 13.8 6.3 3.0 2 1 0 2 2 2 0 Tho complex subunit 7 CRAL_TRIO PF00650.20 ORF46420 - 8e-24 84.2 0.0 1.1e-23 83.7 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF46420 - 3e-07 30.7 0.0 5.7e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF5523 PF17661.1 ORF46420 - 0.056 13.1 2.0 0.083 12.6 2.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5523) PGA2 PF07543.12 ORF46420 - 2.9 7.8 5.5 6 6.8 5.5 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 Mcl1_mid PF12341.8 ORF45648 - 2.1e-36 125.8 0.0 3.1e-36 125.3 0.0 1.2 1 0 0 1 1 1 1 Minichromosome loss protein, Mcl1, middle region Chorion_S16 PF05836.12 ORF45648 - 0.097 12.9 0.4 0.22 11.7 0.4 1.6 1 0 0 1 1 1 0 Chorion protein S16 AA_kinase PF00696.28 ORF4497 - 1.5e-44 152.4 2.4 1.9e-44 152.1 2.4 1.1 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 ORF4497 - 1.5e-22 79.3 0.1 4.7e-22 77.7 0.1 1.9 1 0 0 1 1 1 1 PUA domain U62_UL91 PF17442.2 ORF33600 - 0.09 12.8 0.1 0.25 11.4 0.1 1.7 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins CLTH PF10607.9 ORF33600 - 0.091 12.7 0.1 0.18 11.7 0.1 1.7 1 1 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain MORN PF02493.20 ORF29851 - 1.4e-31 106.4 38.6 2.3e-06 27.2 1.0 9.1 9 0 0 9 9 9 8 MORN repeat cNMP_binding PF00027.29 ORF2826 - 0.00049 20.1 0.1 0.019 15.0 0.1 2.9 2 1 1 3 3 3 1 Cyclic nucleotide-binding domain Oxysterol_BP PF01237.18 ORF1879 - 2.4e-56 191.2 0.1 2.4e-56 191.2 0.1 1.8 2 0 0 2 2 2 1 Oxysterol-binding protein Glyco_hydro_7 PF00840.20 ORF16997 - 7.2e-16 57.9 1.6 1.3e-05 24.1 0.2 3.9 1 1 2 3 3 3 3 Glycosyl hydrolase family 7 TPR_12 PF13424.6 ORF14094 - 2.3e-17 63.0 16.3 9.9e-07 29.0 1.2 4.8 3 2 2 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF14094 - 1e-08 35.5 26.1 1.1e-05 25.8 1.7 5.1 5 1 1 6 6 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF14094 - 6.1e-07 29.1 15.8 0.17 12.1 0.0 5.8 7 0 0 7 7 5 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF14094 - 3.4e-06 27.4 27.1 0.0096 16.7 0.5 7.1 4 1 3 7 7 7 3 Tetratricopeptide repeat TPR_6 PF13174.6 ORF14094 - 1e-05 25.8 12.1 6.3 7.7 0.0 6.2 6 1 0 6 6 6 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF14094 - 3.5e-05 23.7 5.4 0.15 12.4 0.0 4.4 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF14094 - 0.00024 20.8 7.4 2.8 7.9 0.0 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF14094 - 0.00047 20.8 28.4 0.0026 18.4 0.2 5.6 5 2 2 7 7 6 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF14094 - 0.00055 19.8 7.6 0.34 11.0 0.0 4.6 5 1 1 6 6 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF14094 - 0.0012 18.9 8.3 0.0076 16.4 1.4 4.1 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF14094 - 0.0013 18.5 15.9 0.071 13.0 0.4 5.1 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF14094 - 0.003 17.8 0.2 1.3 9.5 0.0 4.0 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_15 PF13429.6 ORF14094 - 0.0076 15.5 2.1 2.2 7.4 0.8 2.5 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_20 PF14561.6 ORF14094 - 0.036 14.4 9.8 10 6.5 0.4 4.3 3 1 1 4 4 4 0 Tetratricopeptide repeat RPN7 PF10602.9 ORF14094 - 0.044 13.5 2.1 15 5.3 0.0 3.6 4 0 0 4 4 4 0 26S proteasome subunit RPN7 Dak2 PF02734.17 ORF14094 - 0.065 13.1 2.4 0.2 11.6 0.1 2.6 3 0 0 3 3 3 0 DAK2 domain TPR_21 PF09976.9 ORF14094 - 0.073 12.8 7.4 0.43 10.3 1.9 2.7 1 1 1 2 2 2 0 Tetratricopeptide repeat-like domain TPR_11 PF13414.6 ORF14094 - 0.57 9.9 3.3 8.4 6.2 0.0 3.6 3 1 1 4 4 4 0 TPR repeat ANAPC5 PF12862.7 ORF14094 - 0.7 10.0 3.1 0.96 9.6 0.1 2.7 3 1 0 3 3 3 0 Anaphase-promoting complex subunit 5 BTAD PF03704.17 ORF14094 - 1.5 9.2 14.5 0.22 11.9 1.5 3.7 3 2 1 4 4 4 0 Bacterial transcriptional activator domain HAD_SAK_2 PF18143.1 ORF12467 - 1.7e-23 83.5 0.0 1.7e-23 83.5 0.0 2.3 2 1 0 2 2 2 1 HAD domain in Swiss Army Knife RNA repair proteins SOBP PF15279.6 ORF12467 - 0.27 11.8 4.8 0.35 11.4 4.8 1.2 1 0 0 1 1 1 0 Sine oculis-binding protein DUF4778 PF16008.5 ORF12467 - 0.75 9.8 11.7 1 9.3 11.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) DUF572 PF04502.13 ORF12467 - 3.7 7.1 32.9 5.2 6.6 32.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF572) V_ATPase_I PF01496.19 ORF12467 - 6.8 4.5 12.7 8.2 4.2 12.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Ndc1_Nup PF09531.10 ORF12467 - 9.9 4.7 8.0 12 4.4 8.0 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PHTB1_C PF14728.6 ORF11927 - 3e-67 227.4 0.3 3.7e-67 227.1 0.3 1.1 1 0 0 1 1 1 1 PTHB1 C-terminus Nuc_sug_transp PF04142.15 ORF111635 - 1e-09 38.0 1.2 1.7e-09 37.3 1.2 1.3 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF111635 - 1.6e-07 31.6 22.2 3.2e-06 27.3 3.6 2.7 2 1 0 2 2 2 2 EamA-like transporter family CRT-like PF08627.10 ORF111635 - 0.0014 17.6 9.8 0.0014 17.6 9.8 2.1 1 1 1 2 2 2 1 CRT-like, chloroquine-resistance transporter-like UAA PF08449.11 ORF111635 - 0.25 10.5 16.1 0.038 13.2 4.2 2.2 1 1 1 2 2 2 0 UAA transporter family SLC35F PF06027.12 ORF111635 - 1.7 8.1 21.4 18 4.7 21.4 2.0 1 1 0 1 1 1 0 Solute carrier family 35 ubiquitin PF00240.23 ORF110423 - 4.1e-27 93.7 0.2 4e-11 42.5 0.1 3.2 3 0 0 3 3 3 3 Ubiquitin family Rad60-SLD PF11976.8 ORF110423 - 2.5e-07 30.4 0.0 0.022 14.6 0.0 3.2 3 0 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF110423 - 0.0024 18.3 0.1 0.28 11.7 0.1 2.8 2 1 0 2 2 2 1 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF110423 - 0.05 13.5 0.2 1.3 9.0 0.3 2.2 2 0 0 2 2 2 0 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF110423 - 0.053 13.9 0.1 1.1 9.7 0.0 2.6 2 1 1 3 3 3 0 Ubiquitin-like domain Glyco_hyd_65N_2 PF14498.6 ORF110423 - 0.14 12.0 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain PHTB1_C PF14728.6 ORF108349 - 3e-67 227.4 0.3 3.7e-67 227.1 0.3 1.1 1 0 0 1 1 1 1 PTHB1 C-terminus TylF PF05711.11 ORF106224 - 0.00071 18.9 0.3 0.02 14.2 0.3 2.1 1 1 0 1 1 1 1 Macrocin-O-methyltransferase (TylF) Methyltransf_24 PF13578.6 ORF106224 - 0.0023 18.9 0.0 0.0039 18.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain DER1 PF04511.15 ORF105046 - 0.0025 17.8 14.7 0.0043 17.0 14.7 1.3 1 0 0 1 1 1 1 Der1-like family DUF1751 PF08551.10 ORF105046 - 0.0026 18.3 4.1 0.0026 18.3 4.1 2.1 1 1 1 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) Rhomboid PF01694.22 ORF105046 - 0.0096 15.9 3.1 0.017 15.1 3.1 1.4 1 0 0 1 1 1 1 Rhomboid family Peptidase_C1 PF00112.23 ORF103598 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF103598 - 2e-08 33.5 4.1 9.5e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF103598 - 9.2e-08 32.4 0.5 2.2e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) MORN PF02493.20 ORF100668 - 1.4e-31 106.4 38.6 2.3e-06 27.2 1.0 9.1 9 0 0 9 9 9 8 MORN repeat OAD_gamma PF04277.13 NODE_16317_length_1098_cov_353.047037_g12391_i0forward_frame_1 - 9.3 6.9 0.0 9.3 6.9 0.0 2.9 3 1 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain DUF2804 PF10974.8 NODE_16315_length_1098_cov_420.589840_g12389_i0forward_frame_1 - 0.035 13.6 1.0 0.057 12.9 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2804) DUF2330 PF10092.9 NODE_16275_length_1100_cov_28.986854_g12357_i0forward_frame_3 - 0.013 14.6 0.2 0.02 14.0 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2330) MCC-bdg_PDZ PF10506.9 NODE_16275_length_1100_cov_28.986854_g12357_i0forward_frame_2 - 0.05 13.6 3.0 0.85 9.7 1.0 2.7 2 0 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome VP4_2 PF08935.10 NODE_16275_length_1100_cov_28.986854_g12357_i0forward_frame_2 - 0.12 12.9 9.0 3.4 8.3 0.3 3.4 3 0 0 3 3 3 0 Viral protein VP4 subunit Cas_Cas4 PF01930.17 NODE_16275_length_1100_cov_28.986854_g12357_i0forward_frame_2 - 0.19 11.8 3.5 0.37 10.9 3.5 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF83 Wtap PF17098.5 NODE_16275_length_1100_cov_28.986854_g12357_i0forward_frame_2 - 0.57 10.1 13.1 16 5.4 11.6 2.5 1 1 1 2 2 2 0 WTAP/Mum2p family CorA PF01544.18 NODE_16275_length_1100_cov_28.986854_g12357_i0forward_frame_2 - 0.75 9.0 9.2 0.094 12.0 4.5 1.7 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein HALZ PF02183.18 NODE_16275_length_1100_cov_28.986854_g12357_i0forward_frame_2 - 1.2 9.4 6.4 17 5.7 0.1 3.4 3 1 0 3 3 3 0 Homeobox associated leucine zipper DivIC PF04977.15 NODE_16275_length_1100_cov_28.986854_g12357_i0forward_frame_2 - 1.6 8.5 11.7 0.54 10.1 0.3 3.4 2 1 1 3 3 3 0 Septum formation initiator Csm1_N PF18504.1 NODE_16275_length_1100_cov_28.986854_g12357_i0forward_frame_2 - 2.9 8.3 11.6 0.97 9.8 2.1 3.7 3 1 0 4 4 4 0 Csm1 N-terminal domain Peptidase_C1 PF00112.23 ORF98931 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF98931 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF95476 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF95476 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) RlmM_FDX PF18125.1 ORF93910 - 1.3e-31 108.9 0.2 3.9e-31 107.4 0.0 1.9 2 0 0 2 2 2 1 RlmM ferredoxin-like domain FtsJ PF01728.19 ORF93910 - 2e-09 37.8 0.0 3.7e-08 33.7 0.0 2.1 2 0 0 2 2 2 1 FtsJ-like methyltransferase DUF4222 PF13973.6 ORF93910 - 0.0021 17.6 0.1 0.51 10.0 0.1 3.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4222) MIT_C PF16565.5 ORF93910 - 0.17 11.9 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT ubiquitin PF00240.23 ORF87177 - 0.00065 19.4 0.6 0.0011 18.7 0.6 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF87177 - 0.031 14.1 0.2 0.087 12.7 0.2 1.8 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like PI3K_rbd PF00794.18 ORF87177 - 0.098 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain CSTF2_hinge PF14327.6 ORF87177 - 0.35 11.4 3.4 8.9 6.8 0.7 3.4 4 0 0 4 4 4 0 Hinge domain of cleavage stimulation factor subunit 2 DUF3887 PF13026.6 ORF87177 - 1.3 9.8 4.9 0.36 11.7 0.6 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF3887) Peptidase_C1 PF00112.23 ORF81556 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF81556 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) RRM_1 PF00076.22 ORF8107 - 1.4e-37 127.3 0.0 9.8e-13 47.7 0.0 4.1 4 0 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF8107 - 0.0057 16.7 0.0 6.4 6.9 0.0 3.7 4 0 0 4 4 4 1 RNA binding motif RRM_5 PF13893.6 ORF8107 - 0.046 13.3 0.0 14 5.3 0.0 2.8 3 0 0 3 3 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF8107 - 0.068 13.0 0.0 0.76 9.7 0.0 2.6 3 0 0 3 3 3 0 Occluded RNA-recognition motif RRM_Rrp7 PF17799.1 ORF8107 - 0.11 12.3 0.0 1.7 8.4 0.0 2.7 3 0 0 3 3 3 0 Rrp7 RRM-like N-terminal domain Limkain-b1 PF11608.8 ORF8107 - 0.17 12.0 0.0 3.9 7.6 0.0 2.7 3 0 0 3 3 3 0 Limkain b1 Jnk-SapK_ap_N PF09744.9 ORF80495 - 0.00018 21.8 27.2 0.077 13.2 7.9 3.2 2 1 1 3 3 3 2 JNK_SAPK-associated protein-1 Dor1 PF04124.12 ORF80495 - 0.0015 17.3 3.3 0.0015 17.3 3.3 3.0 2 1 1 3 3 3 1 Dor1-like family GAS PF13851.6 ORF80495 - 0.0033 16.8 13.2 0.0033 16.8 13.2 2.3 2 1 0 2 2 2 1 Growth-arrest specific micro-tubule binding FlxA PF14282.6 ORF80495 - 0.0054 16.7 0.0 0.0054 16.7 0.0 3.4 3 1 1 4 4 4 1 FlxA-like protein TMF_DNA_bd PF12329.8 ORF80495 - 0.022 14.7 19.6 0.18 11.8 7.0 2.9 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF80495 - 0.088 11.7 21.9 0.096 11.5 17.2 2.5 2 1 1 3 3 3 0 Spc7 kinetochore protein COG5 PF10392.9 ORF80495 - 0.096 12.9 12.9 0.43 10.8 2.9 3.3 3 1 0 3 3 3 0 Golgi transport complex subunit 5 CAP-ZIP_m PF15255.6 ORF80495 - 0.18 12.1 16.1 0.13 12.5 13.5 2.1 1 1 0 2 2 2 0 WASH complex subunit CAP-Z interacting, central region ADIP PF11559.8 ORF80495 - 0.35 10.9 28.0 0.12 12.5 6.2 3.4 2 1 1 4 4 4 0 Afadin- and alpha -actinin-Binding NPV_P10 PF05531.12 ORF80495 - 0.38 11.3 2.5 6.7 7.3 0.0 3.4 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein Snapin_Pallidin PF14712.6 ORF80495 - 0.42 11.1 12.6 2 8.9 1.9 3.4 3 0 0 3 3 3 0 Snapin/Pallidin RNase_H2-Ydr279 PF09468.10 ORF80495 - 0.51 10.5 4.6 0.93 9.7 4.6 1.6 1 1 0 1 1 1 0 Ydr279p protein family (RNase H2 complex component) wHTH domain DUF1664 PF07889.12 ORF80495 - 0.55 10.3 5.0 1.6 8.7 0.3 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) Tropomyosin_1 PF12718.7 ORF80495 - 0.56 10.4 19.0 0.11 12.7 5.9 2.7 3 0 0 3 3 3 0 Tropomyosin like DUF4200 PF13863.6 ORF80495 - 0.69 10.3 16.0 4.6 7.7 1.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4200) Uds1 PF15456.6 ORF80495 - 0.69 10.1 32.6 0.77 9.9 16.8 3.3 1 1 2 3 3 3 0 Up-regulated During Septation Baculo_PEP_C PF04513.12 ORF80495 - 1.1 9.2 5.6 2.1 8.4 0.3 2.7 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Phage_GP20 PF06810.11 ORF80495 - 1.6 8.5 8.0 8.3 6.2 0.3 3.0 2 1 0 2 2 2 0 Phage minor structural protein GP20 Filament PF00038.21 ORF80495 - 2.1 7.9 22.0 0.021 14.4 4.3 2.6 2 1 0 3 3 3 0 Intermediate filament protein DUF3338 PF11819.8 ORF80495 - 2.5 8.1 22.4 0.36 10.8 13.1 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF3338) UPF0242 PF06785.11 ORF80495 - 3 7.9 25.9 2.8 8.0 10.7 2.9 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus KASH_CCD PF14662.6 ORF80495 - 3 7.6 27.8 1.1 9.1 6.8 3.2 2 1 0 3 3 3 0 Coiled-coil region of CCDC155 or KASH HALZ PF02183.18 ORF80495 - 3.3 8.0 20.1 0.21 11.8 0.7 4.0 5 0 0 5 5 4 0 Homeobox associated leucine zipper GIT_CC PF16559.5 ORF80495 - 8.4 6.3 14.0 3 7.8 1.8 4.1 4 0 0 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor PRKG1_interact PF15898.5 ORF80495 - 9.9 7.1 25.8 3.7 8.5 12.8 3.9 1 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain Peptidase_C1 PF00112.23 ORF80250 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF80250 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF80056 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF80056 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF79635 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF79635 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF7745 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF7745 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) PPP4R2 PF09184.11 ORF7738 - 0.14 11.7 5.5 0.17 11.5 5.5 1.2 1 0 0 1 1 1 0 PPP4R2 NOA36 PF06524.12 ORF7738 - 4.7 6.4 12.1 6.9 5.9 12.1 1.1 1 0 0 1 1 1 0 NOA36 protein SDA1 PF05285.12 ORF7738 - 5.4 6.3 11.7 7.4 5.9 11.7 1.1 1 0 0 1 1 1 0 SDA1 Sigma70_ner PF04546.13 ORF7738 - 6.5 6.6 9.5 10 6.0 9.5 1.3 1 0 0 1 1 1 0 Sigma-70, non-essential region Peptidase_C1 PF00112.23 ORF75905 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF75905 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF72332 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF72332 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) EF-hand_8 PF13833.6 ORF70203 - 0.0031 17.3 0.0 0.0095 15.8 0.0 1.9 1 1 1 2 2 2 1 EF-hand domain pair PKD_channel PF08016.12 ORF64044 - 0.00074 18.3 9.7 0.0011 17.8 9.7 1.2 1 0 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF64044 - 0.061 12.5 13.6 0.019 14.2 9.9 1.9 1 1 1 2 2 2 0 Ion transport protein DUF4231 PF14015.6 ORF64044 - 1.7 9.1 3.6 4.2 7.9 3.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) AAA_9 PF12781.7 ORF64003 - 2.1e-40 138.2 0.8 2.9e-40 137.7 0.0 1.7 2 0 0 2 2 2 1 ATP-binding dynein motor region MT PF12777.7 ORF64003 - 1.3e-19 70.4 0.3 1.8e-19 70.0 0.3 1.2 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor APG6_N PF17675.1 ORF64003 - 0.0015 19.1 5.2 0.0066 17.0 4.5 2.2 2 0 0 2 2 2 1 Apg6 coiled-coil region UPF0242 PF06785.11 ORF64003 - 0.011 15.9 0.6 0.017 15.2 0.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Raftlin PF15250.6 ORF64003 - 0.037 12.8 0.0 0.047 12.4 0.0 1.1 1 0 0 1 1 1 0 Raftlin Spc7 PF08317.11 ORF64003 - 0.041 12.7 10.9 0.019 13.9 8.9 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DHR10 PF18595.1 ORF64003 - 0.055 13.5 8.0 0.097 12.7 8.0 1.4 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain DUF4407 PF14362.6 ORF64003 - 0.069 12.5 4.9 0.098 12.0 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CENP-Q PF13094.6 ORF64003 - 0.092 13.0 4.0 0.18 12.0 4.0 1.4 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit AAA_13 PF13166.6 ORF64003 - 0.15 10.7 2.2 0.2 10.3 2.2 1.1 1 0 0 1 1 1 0 AAA domain V-ATPase_G_2 PF16999.5 ORF64003 - 0.29 11.6 11.8 0.75 10.2 11.8 1.6 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit WES_acyltransf PF03007.16 ORF63916 - 2.5e-11 43.9 0.0 3.6e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF4303 PF14136.6 ORF63916 - 0.11 12.3 0.1 0.44 10.3 0.0 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4303) Peptidase_C1 PF00112.23 ORF58147 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF58147 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peripla_BP_2 PF01497.18 ORF57896 - 0.018 14.6 0.1 0.034 13.7 0.1 1.4 1 0 0 1 1 1 0 Periplasmic binding protein YtpI PF14007.6 ORF57624 - 0.045 13.9 1.5 0.16 12.1 1.5 1.9 1 0 0 1 1 1 0 YtpI-like protein CBP PF12192.8 ORF57624 - 0.41 10.9 5.2 1.8 8.8 1.9 2.5 2 0 0 2 2 2 0 Fungal calcium binding protein TMEM72 PF16054.5 ORF57624 - 1.9 8.1 5.8 4.2 7.0 5.8 1.5 1 0 0 1 1 1 0 Transmembrane protein family 72 Peptidase_C1 PF00112.23 ORF55308 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF55308 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DDE_Tnp_1_7 PF13843.6 ORF54817 - 0.034 13.5 0.1 0.053 12.8 0.1 1.2 1 0 0 1 1 1 0 Transposase IS4 DUF5475 PF17569.2 ORF54817 - 0.21 11.9 0.5 3.6 8.0 0.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5475) Snapin_Pallidin PF14712.6 ORF54817 - 0.22 11.9 0.2 0.22 11.9 0.2 3.7 2 2 1 4 4 4 0 Snapin/Pallidin DUF3584 PF12128.8 ORF54817 - 0.26 8.7 14.7 0.12 9.8 9.9 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 ORF54817 - 0.32 10.8 21.8 0.14 12.1 13.8 2.8 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain BshC PF10079.9 ORF54817 - 1.2 7.8 9.1 6.6 5.3 0.1 2.4 2 1 0 2 2 2 0 Bacillithiol biosynthesis BshC CC2-LZ PF16516.5 ORF54817 - 3.1 8.2 10.0 1.4 9.3 0.6 3.5 2 2 2 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Fez1 PF06818.15 ORF54817 - 4.4 7.7 11.9 7.1 7.0 0.1 2.4 2 1 0 2 2 2 0 Fez1 Exonuc_VII_L PF02601.15 ORF54817 - 5.1 6.6 12.9 43 3.5 12.9 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit HTH_37 PF13744.6 ORF54817 - 5.9 6.9 9.4 0.65 10.0 1.5 3.3 3 1 1 4 4 4 0 Helix-turn-helix domain Fzo_mitofusin PF04799.13 ORF54817 - 7.1 6.2 8.1 1.2 8.6 2.2 2.6 2 1 1 3 3 3 0 fzo-like conserved region Ank_2 PF12796.7 ORF49035 - 2.3e-27 95.4 0.0 8.2e-09 35.9 0.0 3.6 2 2 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF49035 - 1.1e-18 67.3 0.0 1.8e-05 25.2 0.0 5.0 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF49035 - 6.3e-17 59.9 0.0 0.11 13.1 0.0 6.9 7 0 0 7 7 7 4 Ankyrin repeat Ank PF00023.30 ORF49035 - 3.9e-16 58.7 0.0 0.0052 17.2 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 ORF49035 - 2.1e-09 37.5 0.0 0.00053 20.2 0.0 4.9 3 2 2 5 5 5 2 Ankyrin repeats (many copies) V_ATPase_I_N PF18670.1 ORF49035 - 0.084 13.3 0.6 0.3 11.5 0.0 2.2 2 0 0 2 2 2 0 V-type ATPase subunit I, N-terminal domain Peptidase_C1 PF00112.23 ORF38655 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF38655 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Pkinase PF00069.25 ORF38342 - 1.3e-48 165.7 0.2 4.2e-44 150.9 0.1 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF38342 - 7.7e-25 87.6 0.5 1.5e-20 73.6 0.1 2.5 3 0 0 3 3 3 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF38342 - 0.0054 15.7 0.1 0.0078 15.2 0.1 1.3 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF38342 - 0.045 13.7 0.7 0.14 12.1 0.1 2.0 2 0 0 2 2 2 0 Phosphotransferase enzyme family Peptidase_C1 PF00112.23 ORF37347 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF37347 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF4094 PF13334.6 ORF28180 - 0.013 15.9 0.1 0.013 15.9 0.1 3.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4094) Pneumo_M2 PF07380.11 ORF28180 - 0.092 13.0 0.3 0.092 13.0 0.3 3.6 2 1 2 5 5 5 0 Pneumovirus M2 protein Peptidase_C1 PF00112.23 ORF27902 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF27902 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF812 PF05667.11 ORF26547 - 0.029 13.3 57.3 0.08 11.8 57.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF812) ELMO_CED12 PF04727.13 ORF26547 - 1 9.5 5.1 0.49 10.5 1.4 2.4 2 1 0 2 2 2 0 ELMO/CED-12 family EPSP_synthase PF00275.20 ORF25018 - 1.9e-112 376.0 0.4 2.2e-112 375.8 0.4 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Phage_gp49_66 PF13876.6 ORF25018 - 0.014 15.7 0.1 0.031 14.6 0.1 1.5 1 0 0 1 1 1 0 Phage protein (N4 Gp49/phage Sf6 gene 66) family Hexapep PF00132.24 ORF25018 - 0.062 13.0 1.8 11 5.9 0.0 3.6 3 0 0 3 3 3 0 Bacterial transferase hexapeptide (six repeats) Peptidase_C1 PF00112.23 ORF24699 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF24699 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF20817 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF20817 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF20518 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF20518 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DNA_pol3_beta_2 PF02767.16 ORF18915 - 6.7e-47 158.5 0.0 7.4e-41 139.0 0.0 3.3 3 1 0 3 3 3 2 DNA polymerase III beta subunit, central domain DNA_pol3_beta PF00712.19 ORF18915 - 2.1e-46 157.0 0.0 8.7e-41 138.8 0.0 3.1 3 0 0 3 3 3 3 DNA polymerase III beta subunit, N-terminal domain DNA_pol3_beta_3 PF02768.15 ORF18915 - 6.3e-46 155.1 0.8 1.4e-45 154.0 0.2 1.8 2 0 0 2 2 2 1 DNA polymerase III beta subunit, C-terminal domain TubC_N PF18563.1 ORF18915 - 0.076 13.0 0.0 1.5 8.9 0.0 2.8 3 0 0 3 3 3 0 TubC N-terminal docking domain Chloroa_b-bind PF00504.21 ORF17074 - 1.2e-51 175.5 1.5 2.2e-27 96.6 0.1 2.2 2 0 0 2 2 2 2 Chlorophyll A-B binding protein Ion_trans PF00520.31 ORF15652 - 1.4e-16 60.5 14.4 1.7e-15 56.9 14.5 2.0 1 1 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF15652 - 0.062 12.0 11.5 0.69 8.5 0.4 2.3 1 1 0 2 2 2 0 Polycystin cation channel Med15 PF09606.10 ORF15652 - 0.15 10.7 0.0 0.21 10.2 0.0 1.1 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal Ceramidase PF05875.12 ORF15392 - 0.23 10.8 8.2 1.3 8.3 8.2 2.0 1 1 0 1 1 1 0 Ceramidase Helicase_C PF00271.31 ORF13985 - 1.4e-12 47.9 0.0 3e-12 46.9 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain dsrm PF00035.26 ORF13985 - 5.8e-06 26.9 0.0 2e-05 25.2 0.0 2.0 1 0 0 1 1 1 1 Double-stranded RNA binding motif Thioredoxin_8 PF13905.6 ORF13985 - 0.0066 16.8 0.0 0.014 15.7 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like Dicer_dimer PF03368.14 ORF13985 - 0.072 13.3 0.1 1.1 9.5 0.0 2.6 3 0 0 3 3 3 0 Dicer dimerisation domain RCC1_2 PF13540.6 ORF110265 - 9.8e-11 41.2 34.4 0.12 12.2 0.0 9.4 9 0 0 9 9 9 7 Regulator of chromosome condensation (RCC1) repeat DDE_Tnp_1_3 PF13612.6 ORF110265 - 0.016 15.2 0.4 62 3.6 0.0 4.5 5 0 0 5 5 5 0 Transposase DDE domain DUF4984 PF16372.5 ORF110265 - 0.045 13.7 6.1 39 4.1 0.0 5.6 7 1 0 8 8 8 0 Domain of unknown function (DUF4984) NPV_P10 PF05531.12 ORF110265 - 0.95 10.0 4.8 18 5.9 0.2 4.6 6 2 1 7 7 7 0 Nucleopolyhedrovirus P10 protein DUF2431 PF10354.9 ORF108952 - 2.2e-20 73.6 0.0 3.7e-20 72.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Peptidase_C1 PF00112.23 ORF106837 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF106837 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF106791 - 1.3e-55 188.8 4.7 2.2e-55 188.1 4.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF106791 - 3.3e-13 49.9 7.2 3.3e-13 49.9 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Pkinase PF00069.25 ORF105812 - 5.8e-07 29.1 0.0 1.1e-06 28.3 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Chloroa_b-bind PF00504.21 ORF105585 - 1.2e-51 175.5 1.5 2.2e-27 96.6 0.1 2.2 2 0 0 2 2 2 2 Chlorophyll A-B binding protein Rubis-subs-bind PF09273.11 ORF105225 - 2 9.1 5.3 2.1 9.0 1.9 2.4 2 1 1 3 3 3 0 Rubisco LSMT substrate-binding Pkinase PF00069.25 ORF102266 - 1.3e-48 165.7 0.2 4.2e-44 150.9 0.1 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF102266 - 7.7e-25 87.6 0.5 1.5e-20 73.6 0.1 2.5 3 0 0 3 3 3 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF102266 - 0.0054 15.7 0.1 0.0078 15.2 0.1 1.3 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF102266 - 0.045 13.7 0.7 0.14 12.1 0.1 2.0 2 0 0 2 2 2 0 Phosphotransferase enzyme family EF-hand_1 PF00036.32 NODE_16422_length_1095_cov_5.037736_g12474_i0reverse_frame_1 - 0.0029 17.0 7.3 0.19 11.3 0.7 3.1 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 NODE_16422_length_1095_cov_5.037736_g12474_i0reverse_frame_1 - 0.0069 16.2 7.2 0.18 11.9 0.5 3.1 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 NODE_16422_length_1095_cov_5.037736_g12474_i0reverse_frame_1 - 0.018 15.4 5.3 0.23 11.9 0.5 2.7 2 1 0 2 2 2 0 EF-hand domain pair Ribosomal_L12 PF00542.19 NODE_16418_length_1095_cov_85.766981_g12471_i0forward_frame_1 - 0.0033 17.7 0.1 0.008 16.5 0.1 1.6 1 0 0 1 1 1 1 Ribosomal protein L7/L12 C-terminal domain DUF1295 PF06966.12 NODE_16398_length_1095_cov_797.032075_g12456_i0forward_frame_1 - 6.1e-28 97.9 3.0 2e-25 89.7 3.0 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 NODE_16398_length_1095_cov_797.032075_g12456_i0forward_frame_1 - 2.2e-07 31.0 1.7 2.2e-07 31.0 1.7 1.9 2 0 0 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 NODE_16398_length_1095_cov_797.032075_g12456_i0forward_frame_1 - 0.00011 22.6 0.3 0.00034 21.0 0.3 1.9 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 NODE_16398_length_1095_cov_797.032075_g12456_i0forward_frame_1 - 0.0012 19.3 0.2 0.0012 19.3 0.2 2.5 3 0 0 3 3 3 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LisH_TPL PF17814.1 NODE_16333_length_1097_cov_1406.175141_g12405_i0reverse_frame_2 - 0.044 13.4 0.5 0.11 12.2 0.1 1.9 2 0 0 2 2 2 0 LisH-like dimerisation domain Aminotran_5 PF00266.19 NODE_16333_length_1097_cov_1406.175141_g12405_i0forward_frame_2 - 2.2e-35 122.3 0.0 2.7e-35 122.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Vma12 PF11712.8 NODE_16317_length_1098_cov_353.047037_g12391_i0reverse_frame_2 - 0.0066 16.5 1.5 0.0066 16.5 1.5 1.9 2 0 0 2 2 2 1 Endoplasmic reticulum-based factor for assembly of V-ATPase p450 PF00067.22 ORF99578 - 8.3e-45 153.4 1.1 1.2e-44 152.9 1.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Amino_oxidase PF01593.24 ORF9707 - 1.8e-06 27.6 3.1 0.0048 16.2 1.7 2.7 1 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 ORF9707 - 0.00075 19.7 0.0 0.0017 18.6 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain p450 PF00067.22 ORF89177 - 1.9e-21 76.4 1.2 2.2e-21 76.2 1.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 USP8_dimer PF08969.11 ORF89177 - 0.046 13.9 2.4 0.073 13.3 0.2 2.3 2 0 0 2 2 2 0 USP8 dimerisation domain MFS_1 PF07690.16 ORF8449 - 8.4e-24 84.1 53.0 2.3e-21 76.1 45.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily BT1 PF03092.16 ORF8449 - 0.00013 20.4 3.5 0.00013 20.4 3.5 2.7 2 2 1 3 3 3 1 BT1 family MFS_4 PF06779.14 ORF8449 - 0.058 12.7 28.3 0.079 12.2 28.3 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB UPF0242 PF06785.11 ORF8449 - 6.1 6.9 5.1 45 4.1 0.1 2.7 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus CRAL_TRIO PF00650.20 ORF77549 - 1.1e-23 83.7 0.4 1.1e-23 83.7 0.4 1.6 2 0 0 2 2 2 1 CRAL/TRIO domain CRAL_TRIO PF00650.20 ORF74648 - 1.1e-23 83.7 0.4 1.1e-23 83.7 0.4 1.6 2 0 0 2 2 2 1 CRAL/TRIO domain Pkinase PF00069.25 ORF68927 - 3.2e-33 115.2 0.0 6.7e-33 114.2 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF68927 - 3.9e-06 26.3 0.1 3.3e-05 23.3 0.1 2.3 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF68927 - 5.5e-05 22.6 0.0 0.13 11.5 0.0 2.2 2 0 0 2 2 2 2 Kinase-like Pox_ser-thr_kin PF05445.11 ORF68927 - 0.0069 15.4 0.1 0.01 14.8 0.1 1.2 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase APH PF01636.23 ORF68927 - 0.0073 16.3 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF68927 - 0.013 14.9 0.0 0.048 13.0 0.0 1.8 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 ORF68927 - 0.041 13.4 0.2 0.1 12.1 0.0 1.7 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Peptidase_C42 PF05533.12 ORF68927 - 0.088 12.9 0.1 2.5 8.2 0.0 2.4 2 0 0 2 2 2 0 Beet yellows virus-type papain-like endopeptidase C42 RIO1 PF01163.22 ORF68927 - 0.17 11.5 0.0 0.32 10.6 0.0 1.5 1 0 0 1 1 1 0 RIO1 family TPR_2 PF07719.17 ORF66712 - 4.2e-05 23.3 1.8 0.029 14.5 1.1 3.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF66712 - 0.044 14.0 0.3 0.16 12.2 0.3 2.1 1 0 0 1 1 1 0 Tetratricopeptide repeat GD_N PF16030.5 ORF64629 - 0.087 13.1 2.2 0.095 13.0 0.3 2.1 2 0 0 2 2 2 0 Serine protease gd N-terminus Macro PF01661.21 ORF64629 - 4.8 7.3 5.1 1.4 9.0 0.2 2.7 2 1 1 3 3 3 0 Macro domain G-patch_2 PF12656.7 ORF56611 - 5e-10 39.3 0.0 5e-10 39.3 0.0 3.0 2 1 0 2 2 1 1 G-patch domain KOW PF00467.29 ORF56611 - 3.4e-06 26.8 1.5 0.00061 19.7 0.2 2.7 2 0 0 2 2 2 1 KOW motif Tim54 PF11711.8 ORF56611 - 0.042 12.6 12.6 0.067 12.0 12.6 1.4 1 1 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 AF-4 PF05110.13 ORF56611 - 0.07 11.2 22.1 0.079 11.0 22.1 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF3912 PF13051.6 ORF56611 - 0.2 11.9 1.3 11 6.4 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3912) Presenilin PF01080.17 ORF56611 - 0.27 10.0 12.1 0.38 9.4 12.1 1.2 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 ORF56611 - 0.28 10.3 12.5 0.41 9.8 12.5 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter V_ATPase_I PF01496.19 ORF56611 - 0.38 8.6 6.5 0.54 8.1 6.5 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CDC45 PF02724.14 ORF56611 - 0.59 8.4 17.8 0.81 7.9 17.8 1.1 1 0 0 1 1 1 0 CDC45-like protein CLN3 PF02487.17 ORF56611 - 0.77 8.7 3.2 1 8.4 3.2 1.2 1 0 0 1 1 1 0 CLN3 protein NPR3 PF03666.13 ORF56611 - 0.88 8.3 18.2 1.3 7.8 18.2 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Apt1 PF10351.9 ORF56611 - 1 8.1 20.1 1 8.1 16.5 2.1 2 0 0 2 2 2 0 Golgi-body localisation protein domain Connexin PF00029.19 ORF56611 - 1.1 9.0 8.8 1.7 8.3 8.8 1.4 1 0 0 1 1 1 0 Connexin RP-C_C PF11800.8 ORF56611 - 1.4 9.0 8.1 2.4 8.2 8.1 1.4 1 0 0 1 1 1 0 Replication protein C C-terminal region GREB1 PF15782.5 ORF56611 - 1.8 5.5 13.2 2.3 5.2 13.2 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Dsh_C PF12316.8 ORF56611 - 2.1 8.7 9.4 4 7.8 9.4 1.5 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal RNA_pol_Rpc4 PF05132.14 ORF56611 - 2.2 8.7 12.7 5.2 7.5 12.7 1.7 1 0 0 1 1 1 0 RNA polymerase III RPC4 EOS1 PF12326.8 ORF56611 - 3.1 7.7 6.2 5.3 6.9 6.2 1.5 1 0 0 1 1 1 0 N-glycosylation protein SLC12 PF03522.15 ORF56611 - 3.3 6.6 17.9 5.3 6.0 17.9 1.2 1 0 0 1 1 1 0 Solute carrier family 12 ALMT PF11744.8 ORF56611 - 3.9 6.2 11.7 6.3 5.5 11.7 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter Hid1 PF12722.7 ORF56611 - 4 5.5 12.7 5.1 5.1 12.7 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein GD_N PF16030.5 ORF55851 - 0.087 13.1 2.2 0.095 13.0 0.3 2.1 2 0 0 2 2 2 0 Serine protease gd N-terminus Macro PF01661.21 ORF55851 - 4.8 7.3 5.1 1.4 9.0 0.2 2.7 2 1 1 3 3 3 0 Macro domain SAS-6_N PF16531.5 ORF46322 - 0.012 16.2 1.3 0.036 14.6 0.0 2.4 3 0 0 3 3 3 0 Centriolar protein SAS N-terminal ADIP PF11559.8 ORF46322 - 0.018 15.1 11.8 0.018 15.1 11.8 4.6 1 1 3 4 4 4 0 Afadin- and alpha -actinin-Binding AAA_21 PF13304.6 ORF46322 - 0.22 11.3 1.8 0.2 11.4 0.2 1.7 2 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Spc7 PF08317.11 ORF46322 - 8.3 5.2 64.9 0.42 9.5 5.0 3.7 1 1 3 4 4 4 0 Spc7 kinetochore protein TPR_2 PF07719.17 ORF43093 - 4.2e-05 23.3 1.8 0.029 14.5 1.1 3.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF43093 - 0.044 14.0 0.3 0.16 12.2 0.3 2.1 1 0 0 1 1 1 0 Tetratricopeptide repeat p450 PF00067.22 ORF40565 - 1.9e-21 76.4 1.2 2.2e-21 76.2 1.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 USP8_dimer PF08969.11 ORF40565 - 0.046 13.9 2.4 0.073 13.3 0.2 2.3 2 0 0 2 2 2 0 USP8 dimerisation domain MFS_1 PF07690.16 ORF39048 - 1.1e-23 83.7 28.2 1.1e-23 83.7 28.2 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily OATP PF03137.20 ORF39048 - 0.017 13.5 8.3 0.21 9.8 6.9 2.4 1 1 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family MFS_3 PF05977.13 ORF39048 - 0.21 10.0 9.8 0.25 9.7 9.5 1.4 1 1 0 1 1 1 0 Transmembrane secretion effector Nkap_C PF06047.11 ORF37808 - 7.4e-46 154.5 1.6 7.4e-46 154.5 1.6 4.1 2 1 0 2 2 2 1 NF-kappa-B-activating protein C-terminal domain SWI-SNF_Ssr4 PF08549.10 ORF37808 - 1.2 7.7 32.7 1.5 7.4 32.7 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) EF-hand_7 PF13499.6 ORF35918 - 0.065 13.7 2.7 0.11 13.0 0.1 2.7 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF35918 - 0.079 12.9 0.1 0.28 11.2 0.1 2.0 1 0 0 1 1 1 0 EF-hand domain MORN PF02493.20 ORF299 - 6e-34 113.9 57.3 8.9e-06 25.3 1.1 10.3 9 1 0 9 9 9 9 MORN repeat Nkap_C PF06047.11 ORF2710 - 7.4e-46 154.5 1.6 7.4e-46 154.5 1.6 4.1 2 1 0 2 2 2 1 NF-kappa-B-activating protein C-terminal domain SWI-SNF_Ssr4 PF08549.10 ORF2710 - 1.2 7.7 32.7 1.5 7.4 32.7 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) SET PF00856.28 ORF25728 - 9.2e-08 32.7 0.6 5.5e-07 30.1 0.0 2.2 2 1 0 2 2 2 1 SET domain DUF3074 PF11274.8 ORF25728 - 0.011 15.8 0.2 0.021 14.8 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3074) EF-hand_7 PF13499.6 ORF22544 - 0.065 13.7 2.7 0.11 13.0 0.1 2.7 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF22544 - 0.079 12.9 0.1 0.28 11.2 0.1 2.0 1 0 0 1 1 1 0 EF-hand domain Anoctamin PF04547.12 ORF21531 - 5.2e-11 42.0 0.0 5.5e-11 42.0 0.0 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel THF_DHG_CYH PF00763.23 ORF2111 - 0.00081 19.7 0.0 0.0017 18.6 0.0 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DUF3343 PF11823.8 ORF2111 - 0.046 13.2 0.2 0.68 9.4 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) Antimicrobial10 PF08105.11 ORF2030 - 0.031 14.4 1.1 0.22 11.6 0.4 2.4 2 0 0 2 2 2 0 Metchnikowin family AA_permease_2 PF13520.6 ORF18564 - 1.8e-17 63.3 20.0 2.4e-17 62.9 20.0 1.1 1 0 0 1 1 1 1 Amino acid permease UPF0139 PF03669.13 ORF18564 - 0.58 10.1 8.2 0.065 13.1 2.9 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) Lig_chan PF00060.26 ORF11082 - 0.097 12.5 0.1 0.1 12.4 0.1 1.3 1 0 0 1 1 1 0 Ligand-gated ion channel Ion_trans PF00520.31 ORF11082 - 0.11 11.7 2.4 0.16 11.2 2.4 1.2 1 0 0 1 1 1 0 Ion transport protein RRM_1 PF00076.22 ORF107774 - 1e-16 60.5 0.0 1.8e-16 59.7 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF107774 - 6.4e-05 23.0 0.0 0.00016 21.7 0.0 1.7 1 1 0 1 1 1 1 RNA recognition motif GNAT_like PF18407.1 ORF107774 - 0.028 14.8 3.8 0.09 13.1 3.2 2.2 2 0 0 2 2 2 0 GCN5-related N-acetyltransferase like domain TPR_12 PF13424.6 ORF10585 - 1.3e-10 41.4 31.5 0.005 17.1 4.3 4.2 2 1 2 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 ORF10585 - 0.19 12.6 35.1 1.6 9.7 0.8 6.6 4 3 2 6 6 6 0 Tetratricopeptide repeat D5_N PF08706.11 ORF10585 - 0.79 10.0 2.5 1.8 8.8 2.5 1.5 1 0 0 1 1 1 0 D5 N terminal like RCC1_2 PF13540.6 ORF105675 - 1.3e-20 72.7 27.2 0.00037 20.2 0.1 9.0 9 0 0 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF105675 - 0.0075 16.2 3.1 12 5.8 0.0 4.5 2 1 1 4 4 4 2 Lipocalin / cytosolic fatty-acid binding protein family Kelch_2 PF07646.15 ORF105675 - 0.12 12.4 5.9 32 4.7 0.1 5.5 6 1 0 6 6 6 0 Kelch motif zf-CCCH PF00642.24 ORF105341 - 3.1e-09 36.5 3.7 6.6e-09 35.5 3.7 1.5 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF105341 - 6.4e-06 26.0 5.3 1.5e-05 24.9 5.3 1.6 1 0 0 1 1 1 1 Zinc finger domain zf-RING_5 PF14634.6 ORF105341 - 0.00058 19.8 10.2 0.0011 18.9 10.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-CCCH_4 PF18044.1 ORF105341 - 0.00096 18.9 3.4 0.00096 18.9 3.4 1.9 2 0 0 2 2 2 1 CCCH-type zinc finger zf-C3HC4_3 PF13920.6 ORF105341 - 0.0019 18.0 7.8 0.0038 17.1 7.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-CCCH_2 PF14608.6 ORF105341 - 0.011 16.1 2.3 0.022 15.2 2.3 1.5 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger zf-RING_2 PF13639.6 ORF105341 - 0.012 15.9 10.1 0.029 14.7 10.1 1.6 1 0 0 1 1 1 0 Ring finger domain zf-C3HC4_2 PF13923.6 ORF105341 - 0.03 14.2 9.0 0.11 12.3 9.0 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF105341 - 0.03 14.4 6.9 0.072 13.1 6.9 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF105341 - 0.43 10.5 8.5 1.6 8.7 8.5 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF105341 - 1.6 8.9 8.6 0.2 11.9 3.1 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-P11 PF03854.14 ORF105341 - 2.1 8.1 5.2 4.1 7.2 5.2 1.4 1 0 0 1 1 1 0 P-11 zinc finger SET PF00856.28 ORF103916 - 8.5e-07 29.5 0.1 5.1e-06 27.0 0.0 1.9 2 0 0 2 2 2 1 SET domain FRB_dom PF08771.11 ORF103916 - 0.00021 21.6 0.2 0.00047 20.5 0.2 1.6 1 0 0 1 1 1 1 FKBP12-rapamycin binding domain Lipase_3 PF01764.25 ORF100354 - 4.1e-29 101.3 0.0 6.7e-29 100.6 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF100354 - 0.013 14.8 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Cutinase PF01083.22 ORF100354 - 0.014 15.3 0.0 0.027 14.4 0.0 1.5 1 1 0 1 1 1 0 Cutinase Abhydrolase_6 PF12697.7 ORF100354 - 0.035 14.7 0.0 0.045 14.3 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family PGAP1 PF07819.13 ORF100354 - 0.045 13.5 0.0 0.088 12.5 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein KbaA PF14089.6 ORF100354 - 0.14 12.0 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 KinB-signalling pathway activation in sporulation MFS_2 PF13347.6 NODE_16565_length_1090_cov_2.291943_g12593_i0forward_frame_1 - 7.9e-78 261.9 26.5 8.8e-78 261.8 26.5 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 NODE_16565_length_1090_cov_2.291943_g12593_i0forward_frame_1 - 6.4e-14 51.6 32.2 9.6e-14 51.1 32.2 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily RCC1_2 PF13540.6 NODE_16470_length_1093_cov_398.623819_g12510_i0reverse_frame_3 - 3.4e-14 52.2 5.8 0.029 14.2 0.0 5.1 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_16470_length_1093_cov_398.623819_g12510_i0reverse_frame_3 - 1.2e-05 25.7 0.0 45 4.6 0.0 5.0 5 0 0 5 5 5 0 Spectrin repeat CAMSAP_CH PF11971.8 NODE_16470_length_1093_cov_398.623819_g12510_i0reverse_frame_3 - 0.0015 18.4 0.5 44 4.0 0.0 4.8 5 0 0 5 5 5 0 CAMSAP CH domain DNA_pol3_tau_5 PF12170.8 NODE_16470_length_1093_cov_398.623819_g12510_i0reverse_frame_3 - 0.038 14.0 1.4 1.3e+02 2.6 0.0 4.5 5 0 0 5 5 5 0 DNA polymerase III tau subunit V interacting with alpha DUF3232 PF11554.8 NODE_16470_length_1093_cov_398.623819_g12510_i0reverse_frame_3 - 0.064 13.6 0.1 1.8e+02 2.4 0.0 4.0 5 0 0 5 5 5 0 Protein of unknown function (DUF3232) DDE_Tnp_1_3 PF13612.6 NODE_16470_length_1093_cov_398.623819_g12510_i0reverse_frame_3 - 0.19 11.7 3.1 1.9e+02 2.0 0.0 4.6 5 0 0 5 5 5 0 Transposase DDE domain Phage_holin_7_1 PF16081.5 NODE_16470_length_1093_cov_398.623819_g12510_i0reverse_frame_3 - 0.29 11.3 19.4 24 5.1 0.2 5.1 1 1 4 5 5 5 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family RCC1_2 PF13540.6 NODE_16470_length_1093_cov_398.623819_g12510_i0reverse_frame_2 - 0.021 14.6 4.3 0.31 10.9 0.1 3.2 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat Med3 PF11593.8 NODE_16470_length_1093_cov_398.623819_g12510_i0reverse_frame_2 - 0.92 8.6 12.8 1.3 8.2 12.8 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal BslA PF17735.1 NODE_16470_length_1093_cov_398.623819_g12510_i0forward_frame_3 - 0.00011 22.2 3.0 6.1 6.9 0.1 4.6 1 1 4 5 5 5 2 Biofilm surface layer A UPF0258 PF06789.12 NODE_16470_length_1093_cov_398.623819_g12510_i0forward_frame_3 - 0.0006 20.0 0.3 1.7 8.7 0.0 2.5 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0258) DUF2367 PF10164.9 NODE_16470_length_1093_cov_398.623819_g12510_i0forward_frame_3 - 0.25 11.9 0.8 1.8e+02 2.7 0.0 3.8 1 1 4 5 5 5 0 Uncharacterized conserved protein (DUF2367) MyTH4 PF00784.17 NODE_16470_length_1093_cov_398.623819_g12510_i0forward_frame_2 - 0.39 11.2 17.5 0.9 10.1 1.8 3.7 2 1 2 4 4 4 0 MyTH4 domain EF-hand_12 PF17901.1 NODE_16470_length_1093_cov_398.623819_g12510_i0forward_frame_2 - 0.68 10.4 4.4 45 4.6 0.2 3.6 2 1 3 5 5 5 0 EF-hand fold domain zf-RING_11 PF17123.5 NODE_16418_length_1095_cov_85.766981_g12471_i0forward_frame_3 - 0.017 14.8 1.5 0.04 13.7 1.5 1.6 1 0 0 1 1 1 0 RING-like zinc finger CorA PF01544.18 NODE_16418_length_1095_cov_85.766981_g12471_i0forward_frame_3 - 0.058 12.7 1.4 1.2 8.4 0.0 2.1 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein Dermcidin PF15291.6 NODE_16418_length_1095_cov_85.766981_g12471_i0forward_frame_3 - 0.15 12.6 0.1 0.26 11.9 0.1 1.4 1 0 0 1 1 1 0 Dermcidin, antibiotic peptide zf-Nse PF11789.8 NODE_16418_length_1095_cov_85.766981_g12471_i0forward_frame_3 - 0.3 10.9 5.3 0.66 9.8 5.3 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit DUF1295 PF06966.12 NODE_16398_length_1095_cov_797.032075_g12456_i0forward_frame_2 - 3.6e-07 29.9 3.6 9.6e-07 28.5 3.6 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) FGF PF00167.18 ORF99328 - 0.0047 17.0 0.0 3.8 7.7 0.0 3.1 2 1 1 3 3 3 2 Fibroblast growth factor RicinB_lectin_2 PF14200.6 ORF99328 - 0.021 15.5 0.0 3.2 8.5 0.0 3.1 1 1 3 4 4 4 0 Ricin-type beta-trefoil lectin domain-like DUF1521 PF07481.11 ORF99328 - 0.074 13.0 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1521) Lyase_1 PF00206.20 ORF98748 - 8.2e-90 301.4 0.0 1.1e-89 301.0 0.0 1.2 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 ORF98748 - 8.6e-27 93.3 0.3 1.9e-26 92.2 0.3 1.6 1 0 0 1 1 1 1 Fumarase C C-terminus Pkinase PF00069.25 ORF96949 - 1.6e-79 267.0 0.2 2e-79 266.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF96949 - 2e-42 145.3 0.0 2.6e-42 144.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF96949 - 3.7e-07 29.7 0.0 7e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF96949 - 2e-06 27.3 0.0 9.8e-06 25.1 0.0 2.0 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF96949 - 6.5e-05 21.9 0.2 0.00017 20.5 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF96949 - 0.0092 15.9 0.0 0.039 13.9 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family PH PF00169.29 ORF96949 - 0.017 15.6 0.0 0.038 14.5 0.0 1.7 1 0 0 1 1 1 0 PH domain SHIPPO-rpt PF07004.12 ORF96416 - 9e-31 105.4 80.6 1.7e-06 28.7 3.7 10.5 10 0 0 10 10 10 10 Sperm-tail PG-rich repeat DDE_Tnp_1 PF01609.21 ORF96164 - 1.4e-30 106.6 0.0 1.8e-30 106.2 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain Nterm_IS4 PF13006.7 ORF96164 - 6.9e-06 26.2 0.1 1.9e-05 24.7 0.1 1.8 1 0 0 1 1 1 1 Insertion element 4 transposase N-terminal DUF4164 PF13747.6 ORF96145 - 2.4e-05 24.5 7.9 0.025 14.8 5.3 3.1 2 1 1 3 3 3 2 Domain of unknown function (DUF4164) Phage_cap_E PF03864.15 ORF96145 - 0.74 8.9 4.5 0.51 9.5 0.1 2.2 2 0 0 2 2 2 0 Phage major capsid protein E Ca_chan_IQ PF08763.11 ORF96145 - 1.3 9.3 7.2 0.26 11.5 0.2 3.1 2 2 2 4 4 4 0 Voltage gated calcium channel IQ domain PFK PF00365.20 ORF94414 - 4e-07 29.6 0.0 0.00035 20.0 0.0 2.2 2 0 0 2 2 2 2 Phosphofructokinase Pkinase PF00069.25 ORF93771 - 1.6e-79 267.0 0.2 2e-79 266.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF93771 - 2e-42 145.3 0.0 2.6e-42 144.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF93771 - 3.7e-07 29.7 0.0 7e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF93771 - 2e-06 27.3 0.0 9.8e-06 25.1 0.0 2.0 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF93771 - 6.5e-05 21.9 0.2 0.00017 20.5 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF93771 - 0.0092 15.9 0.0 0.039 13.9 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family PH PF00169.29 ORF93771 - 0.017 15.6 0.0 0.038 14.5 0.0 1.7 1 0 0 1 1 1 0 PH domain T2SSE PF00437.20 ORF8789 - 0.00043 19.4 0.1 0.031 13.3 0.0 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein Rhodanese PF00581.20 ORF8789 - 0.0022 18.5 0.0 0.017 15.7 0.0 2.4 1 1 0 1 1 1 1 Rhodanese-like domain AAA_16 PF13191.6 ORF8789 - 0.023 15.1 0.4 0.05 14.0 0.2 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.6 ORF8789 - 0.056 13.8 0.9 2.6 8.4 0.3 2.2 1 1 1 2 2 2 0 AAA domain DUF3333 PF11812.8 ORF8789 - 0.064 13.5 0.0 0.17 12.0 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3333) AAA_22 PF13401.6 ORF8789 - 0.078 13.3 0.0 0.17 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF8789 - 0.094 13.3 0.3 0.29 11.7 0.2 1.9 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF8789 - 0.11 13.0 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain Trypsin_2 PF13365.6 ORF86250 - 2.2e-32 113.0 0.4 3.7e-32 112.3 0.4 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ PF00595.24 ORF86250 - 4.2e-30 103.9 8.0 1.7e-15 57.1 0.1 3.3 3 0 0 3 3 3 2 PDZ domain PDZ_2 PF13180.6 ORF86250 - 2.5e-27 95.0 1.5 5.9e-15 55.4 0.0 2.6 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF86250 - 6.1e-22 77.2 3.6 1.4e-10 40.9 0.0 2.9 3 0 0 3 3 3 2 PDZ domain Trypsin PF00089.26 ORF86250 - 3.6e-20 72.7 0.1 6e-20 72.0 0.1 1.3 1 0 0 1 1 1 1 Trypsin PDZ_1 PF12812.7 ORF86250 - 0.0014 18.6 0.1 0.33 11.0 0.0 2.5 2 0 0 2 2 2 1 PDZ-like domain Tricorn_PDZ PF14685.6 ORF86250 - 0.0045 16.9 2.6 1.1 9.2 0.1 3.4 3 1 0 3 3 3 2 Tricorn protease PDZ domain DUF3394 PF11874.8 ORF86250 - 0.026 14.2 0.9 0.4 10.3 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3394) Peptidase_S46 PF10459.9 ORF86250 - 0.19 10.3 2.1 0.23 10.1 0.7 1.7 2 0 0 2 2 2 0 Peptidase S46 Ion_trans PF00520.31 ORF84134 - 3.4e-24 85.4 23.4 4.6e-24 85.0 23.4 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF84134 - 2.2e-08 33.4 0.1 0.0035 17.2 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF84134 - 2.9e-08 32.7 0.1 0.0011 18.4 0.1 3.0 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF84134 - 1.7e-07 31.6 1.0 4.2e-05 23.9 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF84134 - 0.00032 20.5 0.0 0.16 11.9 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain pair CBM_20 PF00686.19 ORF84134 - 0.12 12.3 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Starch binding domain YMF19 PF02326.15 ORF84134 - 0.16 12.8 0.1 0.16 12.8 0.1 2.6 3 0 0 3 3 3 0 Plant ATP synthase F0 HemY_N PF07219.13 ORF84134 - 0.31 11.3 4.6 7.7 6.8 0.4 2.8 3 0 0 3 3 3 0 HemY protein N-terminus Sarcoglycan_1 PF04790.13 ORF84134 - 0.38 10.1 4.0 1.3 8.3 0.1 2.3 2 0 0 2 2 2 0 Sarcoglycan complex subunit protein DHHC PF01529.20 ORF83146 - 1.4e-31 109.3 2.1 1.4e-31 109.3 2.1 2.1 2 1 0 2 2 2 1 DHHC palmitoyltransferase PFK PF00365.20 ORF82036 - 4e-07 29.6 0.0 0.00035 20.0 0.0 2.2 2 0 0 2 2 2 2 Phosphofructokinase DUF1749 PF08538.10 ORF80118 - 1.4e-18 67.0 0.0 2e-18 66.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1749) PRK PF00485.18 ORF80118 - 2.2e-09 37.3 0.0 3.2e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 ORF80118 - 6.1e-08 33.3 0.0 1.2e-07 32.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 ORF80118 - 2.2e-05 23.8 0.0 3.7e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 ORF80118 - 3.2e-05 24.1 0.2 0.002 18.3 0.0 2.8 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.6 ORF80118 - 3.2e-05 24.4 0.1 0.0014 19.0 0.0 2.7 2 1 1 3 3 3 1 AAA ATPase domain Cytidylate_kin2 PF13189.6 ORF80118 - 0.0012 19.1 0.0 0.0032 17.6 0.0 1.7 1 0 0 1 1 1 1 Cytidylate kinase-like family CPT PF07931.12 ORF80118 - 0.0035 17.2 0.0 0.008 16.0 0.0 1.6 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein ABC_tran PF00005.27 ORF80118 - 0.0053 17.3 0.0 0.012 16.1 0.0 1.4 1 1 0 1 1 1 1 ABC transporter AAA_5 PF07728.14 ORF80118 - 0.0072 16.3 0.0 0.015 15.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Torsin PF06309.11 ORF80118 - 0.062 13.4 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Torsin dNK PF01712.19 ORF80118 - 0.073 12.9 0.0 0.51 10.1 0.0 2.0 2 0 0 2 2 2 0 Deoxynucleoside kinase 6PF2K PF01591.18 ORF80118 - 0.13 11.6 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase KTI12 PF08433.10 ORF80118 - 0.13 11.7 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 ADH_N PF08240.12 ORF7990 - 3.9e-29 100.7 0.7 6.9e-29 99.9 0.7 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF7990 - 5.9e-24 84.5 0.1 9.4e-24 83.8 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF7990 - 1.6e-09 37.5 0.0 2.3e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF7990 - 7.7e-06 27.0 0.0 1.5e-05 26.1 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 ORF7990 - 0.02 14.2 1.0 0.03 13.6 1.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 ORF7990 - 0.11 12.0 0.1 0.26 10.8 0.1 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Nicastrin PF05450.15 ORF75457 - 0.077 12.5 4.7 0.071 12.6 3.3 1.7 1 1 0 1 1 1 0 Nicastrin Dala_Dala_lig_C PF07478.13 ORF71898 - 7.7e-83 277.0 0.0 1.1e-82 276.5 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 ORF71898 - 1.7e-29 102.3 0.0 3.5e-29 101.3 0.0 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase N-terminus ATP-grasp PF02222.22 ORF71898 - 1.6e-13 50.6 0.0 3e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 ORF71898 - 1.1e-05 24.9 0.0 0.015 14.5 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATP-grasp_4 PF13535.6 ORF71898 - 0.00017 21.2 0.5 0.0024 17.5 0.5 2.3 1 1 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 ORF71898 - 0.03 13.9 0.0 0.14 11.7 0.0 1.9 2 0 0 2 2 2 0 RimK-like ATP-grasp domain GARS_A PF01071.19 ORF71898 - 0.097 12.4 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PTS_2-RNA PF01885.16 ORF71898 - 0.14 12.2 0.0 1.6 8.8 0.0 2.1 2 0 0 2 2 2 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Catalase PF00199.19 ORF69714 - 1.5e-129 432.5 0.3 1.9e-129 432.2 0.3 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 ORF69714 - 2e-21 75.9 0.0 4.2e-21 74.9 0.0 1.5 1 0 0 1 1 1 1 Catalase-related immune-responsive GPHH PF16905.5 ORF6474 - 3.2e-09 36.4 0.0 7.2e-09 35.3 0.0 1.6 1 0 0 1 1 1 1 Voltage-dependent L-type calcium channel, IQ-associated Ion_trans PF00520.31 ORF6474 - 0.0012 18.2 0.1 0.0018 17.5 0.1 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF6474 - 0.022 14.3 0.1 0.082 12.5 0.1 2.0 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF6474 - 0.061 13.3 0.1 0.27 11.3 0.1 2.2 1 0 0 1 1 1 0 EF-hand domain GCV_T PF01571.21 ORF63754 - 5.7e-83 278.2 0.2 7.2e-83 277.9 0.2 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 ORF63754 - 2.3e-13 49.9 0.1 4.7e-13 48.9 0.1 1.5 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain POPLD PF08170.12 ORF63754 - 0.0016 18.8 0.0 0.003 17.9 0.0 1.4 1 0 0 1 1 1 1 POPLD (NUC188) domain UBA PF00627.31 ORF61908 - 2.9e-05 23.9 0.2 5e-05 23.1 0.2 1.4 1 0 0 1 1 1 1 UBA/TS-N domain RuvA_C PF07499.13 ORF61908 - 0.0047 17.4 0.0 0.011 16.2 0.0 1.6 1 0 0 1 1 1 1 RuvA, C-terminal domain IMS_HHH PF11798.8 ORF61908 - 0.027 14.8 0.0 0.079 13.3 0.0 1.8 1 0 0 1 1 1 0 IMS family HHH motif Thymidylate_kin PF02223.17 ORF61222 - 5.6e-41 140.3 0.0 8.2e-41 139.7 0.0 1.3 1 0 0 1 1 1 1 Thymidylate kinase DUF4164 PF13747.6 ORF58367 - 2.4e-05 24.5 7.9 0.025 14.8 5.3 3.1 2 1 1 3 3 3 2 Domain of unknown function (DUF4164) Ca_chan_IQ PF08763.11 ORF58367 - 1.1 9.5 8.1 0.26 11.5 0.2 3.5 2 2 2 4 4 4 0 Voltage gated calcium channel IQ domain DUF2408 PF10303.9 ORF58367 - 4.6 7.8 20.4 3.2 8.3 13.2 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2408) Cation_efflux PF01545.21 ORF55604 - 1.8e-23 83.3 2.2 7.2e-23 81.4 2.2 1.9 1 1 0 1 1 1 1 Cation efflux family FtsL PF04999.13 ORF55604 - 0.02 14.9 0.3 0.14 12.2 0.0 2.5 2 0 0 2 2 2 0 Cell division protein FtsL L6_membrane PF05805.12 ORF55604 - 0.048 13.2 0.2 0.1 12.1 0.2 1.6 1 0 0 1 1 1 0 L6 membrane protein EF-G-binding_N PF07299.11 ORF55604 - 0.18 12.3 0.5 2.3 8.8 0.3 2.4 2 0 0 2 2 2 0 Elongation factor G-binding protein, N-terminal EF-hand_6 PF13405.6 ORF55603 - 8.4e-16 56.5 0.4 4.7e-06 26.1 0.0 5.4 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF55603 - 5e-15 53.9 0.1 2.2e-05 23.7 0.0 5.7 5 0 0 5 5 5 3 EF hand EF-hand_7 PF13499.6 ORF55603 - 3.6e-14 53.0 3.1 0.00013 22.3 0.0 4.0 2 2 3 5 5 5 4 EF-hand domain pair EF-hand_8 PF13833.6 ORF55603 - 1.6e-08 34.2 0.0 0.0052 16.6 0.0 5.2 5 0 0 5 5 5 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF55603 - 1.1e-07 31.0 1.0 6e-05 22.3 0.0 3.7 3 0 0 3 3 3 1 EF hand DUF5600 PF18150.1 ORF55603 - 0.0073 16.9 1.1 2.8 8.6 0.0 3.1 3 0 0 3 3 3 1 Domain of unknown function (DUF5600) DUF2407_C PF13373.6 ORF55603 - 0.014 15.5 0.2 4.9 7.3 0.1 2.4 2 0 0 2 2 2 0 DUF2407 C-terminal domain SAP PF02037.27 ORF55603 - 0.023 14.4 0.0 0.08 12.7 0.0 1.9 1 0 0 1 1 1 0 SAP domain FANC_SAP PF18081.1 ORF55603 - 0.13 12.5 0.5 0.13 12.5 0.5 2.9 4 0 0 4 4 4 0 Fanconi anemia-associated nuclease SAP domain Bystin PF05291.11 ORF5324 - 2.5e-113 378.2 0.1 3.2e-113 377.9 0.1 1.0 1 0 0 1 1 1 1 Bystin Pkinase PF00069.25 ORF49989 - 1.6e-79 267.0 0.2 2e-79 266.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49989 - 2e-42 145.3 0.0 2.6e-42 144.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF49989 - 3.7e-07 29.7 0.0 7e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF49989 - 2e-06 27.3 0.0 9.8e-06 25.1 0.0 2.0 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF49989 - 6.5e-05 21.9 0.2 0.00017 20.5 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF49989 - 0.0092 15.9 0.0 0.039 13.9 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family PH PF00169.29 ORF49989 - 0.017 15.6 0.0 0.038 14.5 0.0 1.7 1 0 0 1 1 1 0 PH domain Pkinase PF00069.25 ORF49580 - 1.6e-79 267.0 0.2 2e-79 266.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49580 - 2e-42 145.3 0.0 2.6e-42 144.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF49580 - 3.7e-07 29.7 0.0 7e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF49580 - 2e-06 27.3 0.0 9.8e-06 25.1 0.0 2.0 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF49580 - 6.5e-05 21.9 0.2 0.00017 20.5 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF49580 - 0.0092 15.9 0.0 0.039 13.9 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family PH PF00169.29 ORF49580 - 0.017 15.6 0.0 0.038 14.5 0.0 1.7 1 0 0 1 1 1 0 PH domain DUF4164 PF13747.6 ORF44598 - 2.3e-05 24.6 7.9 0.025 14.8 5.3 3.1 2 1 1 3 3 3 2 Domain of unknown function (DUF4164) Ca_chan_IQ PF08763.11 ORF44598 - 1.8 8.8 8.9 0.27 11.5 0.2 3.5 2 2 2 4 4 4 0 Voltage gated calcium channel IQ domain DUF2408 PF10303.9 ORF44598 - 5.2 7.6 20.6 6.6 7.3 15.5 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2408) ABC_tran PF00005.27 ORF44523 - 4.5e-27 95.2 0.9 4.9e-26 91.9 0.0 2.2 2 0 0 2 2 2 1 ABC transporter ABC_tran_CTD PF16326.5 ORF44523 - 4.1e-09 36.6 14.3 8.5e-09 35.5 14.3 1.5 1 0 0 1 1 1 1 ABC transporter C-terminal domain AAA_21 PF13304.6 ORF44523 - 4.7e-07 29.9 1.0 0.00031 20.7 0.0 2.5 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 ORF44523 - 0.00012 22.6 5.5 0.0059 17.1 0.1 2.2 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 ORF44523 - 0.00025 21.2 0.0 0.00087 19.5 0.0 1.9 1 0 0 1 1 1 1 AAA domain DUF812 PF05667.11 ORF44523 - 0.0012 17.8 3.5 0.0015 17.5 3.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) MMR_HSR1 PF01926.23 ORF44523 - 0.0015 18.6 0.0 0.0036 17.4 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase SMC_N PF02463.19 ORF44523 - 0.0022 17.4 3.2 0.24 10.8 0.5 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF44523 - 0.0032 17.9 0.5 0.012 16.0 0.0 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 ORF44523 - 0.0047 16.6 0.2 0.01 15.6 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATP-synt_DE_N PF02823.16 ORF44523 - 0.0087 15.9 0.0 0.17 11.8 0.0 2.3 2 0 0 2 2 2 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WDCP PF15390.6 ORF44523 - 0.021 13.2 0.6 0.027 12.9 0.6 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family RsgA_GTPase PF03193.16 ORF44523 - 0.024 14.6 1.1 0.031 14.2 0.1 1.7 2 0 0 2 2 1 0 RsgA GTPase AAA_24 PF13479.6 ORF44523 - 0.027 14.2 0.1 0.052 13.3 0.1 1.6 1 1 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF44523 - 0.031 13.3 0.1 0.074 12.0 0.1 1.7 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB End3 PF12761.7 ORF44523 - 0.031 14.4 4.5 0.053 13.7 4.5 1.3 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 AAA_27 PF13514.6 ORF44523 - 0.045 13.4 3.5 0.2 11.2 0.1 2.3 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF44523 - 0.06 12.5 0.0 0.2 10.8 0.0 1.8 1 1 0 1 1 1 0 NB-ARC domain Mg_chelatase PF01078.21 ORF44523 - 0.077 12.4 0.0 1.2 8.5 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI RIC3 PF15361.6 ORF44523 - 0.11 12.8 1.3 0.23 11.8 1.3 1.5 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 AAA_22 PF13401.6 ORF44523 - 0.12 12.7 0.6 0.83 9.9 0.1 2.3 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 ORF44523 - 0.13 11.9 0.1 0.32 10.6 0.1 1.7 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 ORF44523 - 0.15 12.3 0.2 0.62 10.3 0.1 2.0 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 ORF44523 - 0.16 12.0 4.0 0.47 10.5 0.3 2.3 2 0 0 2 2 2 0 Dynamin family APG6_N PF17675.1 ORF44523 - 0.17 12.4 9.5 0.27 11.8 9.5 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region RNA_helicase PF00910.22 ORF44523 - 0.17 12.3 0.0 0.42 11.0 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 ORF44523 - 0.18 11.3 0.0 0.37 10.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_15 PF13175.6 ORF44523 - 0.27 10.9 6.9 0.21 11.2 0.3 2.1 2 0 0 2 2 2 0 AAA ATPase domain OmpH PF03938.14 ORF44523 - 1.8 8.9 10.3 3.8 7.8 10.3 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Ion_trans_2 PF07885.16 ORF43649 - 3.9e-26 90.8 19.3 1.3e-14 53.9 6.6 2.4 2 1 0 2 2 2 2 Ion channel Ion_trans PF00520.31 ORF43649 - 1.1e-10 41.2 9.1 3e-05 23.4 1.3 2.2 2 0 0 2 2 2 2 Ion transport protein EF-hand_1 PF00036.32 ORF43649 - 7e-09 34.6 0.9 0.0044 16.5 0.9 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF43649 - 2.1e-08 34.5 0.6 6.6e-08 32.9 0.6 1.8 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF43649 - 3.4e-08 32.8 0.1 0.0049 16.7 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF43649 - 1.7e-06 27.8 0.2 0.01 15.6 0.3 2.9 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF43649 - 2.3e-06 26.8 0.2 0.047 13.2 0.0 2.5 2 0 0 2 2 2 2 EF hand Lig_chan PF00060.26 ORF43649 - 2.3 8.0 5.8 3.5 7.5 2.3 2.5 2 1 0 2 2 2 0 Ligand-gated ion channel DHHC PF01529.20 ORF43649 - 5.4 7.1 6.4 15 5.7 4.1 2.5 2 1 0 2 2 2 0 DHHC palmitoyltransferase RNase_T PF00929.24 ORF3533 - 1.3e-09 38.8 0.0 4.5e-09 37.1 0.0 1.8 1 1 0 1 1 1 1 Exonuclease DNA_pol_A_exo1 PF01612.20 ORF3533 - 0.14 11.8 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 3'-5' exonuclease Ribosomal_S15 PF00312.22 ORF31334 - 1.6e-16 60.2 0.2 1.6e-16 60.2 0.2 1.8 2 0 0 2 2 2 1 Ribosomal protein S15 Tom37 PF10568.9 ORF31334 - 0.031 14.6 0.0 0.063 13.6 0.0 1.5 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein HP0268 PF18618.1 ORF31334 - 0.043 14.2 2.1 0.22 12.0 1.4 2.4 1 1 1 2 2 2 0 HP0268 LPG_synthase_TM PF03706.13 ORF31334 - 0.065 12.8 1.8 0.11 12.1 1.8 1.3 1 0 0 1 1 1 0 Lysylphosphatidylglycerol synthase TM region EF-hand_7 PF13499.6 ORF30664 - 0.09 13.2 0.1 0.35 11.4 0.1 1.9 1 0 0 1 1 1 0 EF-hand domain pair MFS_1 PF07690.16 ORF29467 - 5e-22 78.3 26.4 1.3e-15 57.2 19.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF29467 - 1e-11 44.8 12.5 1.4e-11 44.3 12.5 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 ORF29467 - 0.00015 20.5 0.6 0.00029 19.5 0.6 1.6 1 0 0 1 1 1 1 MFS/sugar transport protein MARVEL PF01284.23 ORF29467 - 0.0019 18.3 1.4 0.0019 18.3 1.4 3.4 1 1 3 4 4 4 1 Membrane-associating domain ATG22 PF11700.8 ORF29467 - 0.53 8.9 7.2 0.36 9.4 3.8 2.3 1 1 1 2 2 2 0 Vacuole effluxer Atg22 like Pkinase PF00069.25 ORF29001 - 1.6e-79 267.0 0.2 2e-79 266.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29001 - 2e-42 145.3 0.0 2.6e-42 144.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF29001 - 3.7e-07 29.7 0.0 7e-07 28.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF29001 - 2e-06 27.3 0.0 9.8e-06 25.1 0.0 2.0 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF29001 - 6.5e-05 21.9 0.2 0.00017 20.5 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF29001 - 0.0092 15.9 0.0 0.039 13.9 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family PH PF00169.29 ORF29001 - 0.017 15.6 0.0 0.038 14.5 0.0 1.7 1 0 0 1 1 1 0 PH domain Nicastrin PF05450.15 ORF2893 - 0.077 12.5 4.7 0.071 12.6 3.3 1.7 1 1 0 1 1 1 0 Nicastrin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks34.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks34.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks34.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks34.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-B_box PF00643.24 NODE_75111_length_210_cov_1.457143_g67170_i0forward_frame_1 - 0.0041 17.2 3.3 0.0061 16.7 3.3 1.3 1 0 0 1 1 1 1 B-box zinc finger Peptidase_M99 PF17033.5 NODE_75107_length_210_cov_1.508571_g67166_i0reverse_frame_1 - 0.025 14.0 0.0 0.027 13.9 0.0 1.1 1 0 0 1 1 1 0 Carboxypeptidase controlling helical cell shape catalytic Chloroa_b-bind PF00504.21 NODE_75094_length_210_cov_1.571429_g67153_i0reverse_frame_1 - 0.0025 18.4 0.0 0.0034 17.9 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Ribosomal_L50 PF10501.9 NODE_75093_length_210_cov_1.582857_g67152_i0reverse_frame_1 - 0.39 10.9 3.0 1.4 9.1 0.1 2.1 1 1 1 2 2 2 0 Ribosomal subunit 39S Lamprin PF06403.11 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_1 - 0.13 12.3 7.2 0.26 11.3 7.2 1.6 1 1 0 1 1 1 0 Lamprin Pox_A30L_A26L PF06086.12 NODE_75090_length_210_cov_1.594286_g67149_i0reverse_frame_1 - 0.027 14.2 0.2 0.028 14.1 0.2 1.0 1 0 0 1 1 1 0 Orthopoxvirus A26L/A30L protein SFTA2 PF15210.6 NODE_75081_length_210_cov_1.617143_g67140_i0reverse_frame_1 - 0.043 13.7 0.2 4.4 7.3 0.0 2.4 2 0 0 2 2 2 0 Surfactant-associated protein 2 zf-RING_2 PF13639.6 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 1.4e-07 31.7 0.5 2.4e-07 31.0 0.5 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 3.5e-05 24.0 3.3 0.00016 21.9 2.6 2.0 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.00029 20.5 0.7 0.00062 19.5 0.7 1.5 1 1 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.00065 19.5 0.5 0.0015 18.3 0.5 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.022 14.8 1.2 0.12 12.4 1.2 1.9 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.032 14.1 0.1 0.1 12.5 0.1 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Rad50_zn_hook PF04423.14 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.057 13.3 0.0 1.4 8.8 0.0 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif DUF4655 PF15548.6 NODE_75076_length_210_cov_1.674286_g67135_i0reverse_frame_1 - 0.073 12.0 0.2 0.088 11.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4655) CAP_N PF01213.19 NODE_75063_length_210_cov_1.788571_g67122_i0reverse_frame_1 - 0.29 10.6 6.1 0.26 10.7 6.1 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_75063_length_210_cov_1.788571_g67122_i0reverse_frame_1 - 0.38 10.8 3.8 0.39 10.8 3.8 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator Flg_hook PF02120.16 NODE_75054_length_210_cov_1.817143_g67113_i0reverse_frame_1 - 0.098 12.6 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK ELK PF03789.13 NODE_75050_length_210_cov_1.828571_g67109_i0reverse_frame_1 - 1.5 9.0 4.7 4.3 7.5 0.1 2.4 2 0 0 2 2 2 0 ELK domain GRDB PF07355.12 NODE_75046_length_210_cov_1.862857_g67105_i0reverse_frame_1 - 0.15 11.2 0.0 0.16 11.2 0.0 1.0 1 0 0 1 1 1 0 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Fer4_2 PF12797.7 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_1 - 0.0014 18.6 0.3 0.0023 17.9 0.3 1.4 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4 PF00037.27 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_1 - 0.0014 18.3 0.2 0.002 17.9 0.2 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_1 - 0.0072 16.4 0.3 0.011 15.7 0.3 1.4 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_4 PF12800.7 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_1 - 0.046 14.2 1.6 0.08 13.5 1.6 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain DUF4828 PF16110.5 NODE_75039_length_210_cov_1.942857_g67098_i0forward_frame_1 - 0.012 16.0 0.1 0.014 15.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4828) Sacchrp_dh_C PF16653.5 NODE_75035_length_210_cov_1.971429_g67094_i0forward_frame_1 - 8.3e-15 55.6 0.0 8.7e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain He_PIG PF05345.12 NODE_75019_length_210_cov_2.165714_g67078_i0forward_frame_1 - 0.29 11.3 5.0 1.1 9.5 5.0 2.2 1 1 0 1 1 1 0 Putative Ig domain Phenol_monoox PF04663.12 NODE_75017_length_210_cov_2.171429_g67076_i0reverse_frame_1 - 0.11 12.7 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 Phenol hydroxylase conserved region DUF902 PF06001.13 NODE_75017_length_210_cov_2.171429_g67076_i0reverse_frame_1 - 0.13 12.8 0.7 0.18 12.3 0.7 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF902) zf-RING_UBOX PF13445.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 5.4e-08 32.7 2.0 9.6e-08 31.9 2.0 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 1.3e-07 31.4 3.9 2.1e-07 30.8 3.9 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 1.5e-07 31.1 3.6 1.5e-07 31.1 3.6 1.4 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 3.3e-07 30.1 2.2 3.3e-07 30.1 2.2 1.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 4.1e-07 29.7 5.4 5.4e-07 29.4 4.0 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 9.9e-07 28.5 2.2 9.9e-07 28.5 2.2 1.4 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 2.3e-06 27.6 4.7 3.9e-06 26.9 4.7 1.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 2.3e-06 27.8 4.5 2.3e-06 27.8 4.5 1.5 2 0 0 2 2 2 1 Ring finger domain Prok-RING_4 PF14447.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 4.1e-06 26.6 2.5 7e-06 25.8 2.5 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.0029 17.9 2.5 0.0029 17.9 2.5 1.5 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_6 PF14835.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.0053 16.6 0.8 0.0066 16.3 0.4 1.4 1 1 0 1 1 1 1 zf-RING of BARD1-type protein zf-C3HC4_5 PF17121.5 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.0069 16.2 2.6 0.0069 16.2 2.6 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.031 14.4 1.6 0.034 14.3 1.6 1.2 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-RING_11 PF17123.5 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.12 12.1 4.2 7.7 6.4 0.0 2.3 2 0 0 2 2 2 0 RING-like zinc finger DZR PF12773.7 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.16 12.0 6.2 0.27 11.3 6.3 1.6 1 1 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.7 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.21 11.6 4.3 0.13 12.3 2.5 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain HypA PF01155.19 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.28 11.2 3.4 0.27 11.2 2.8 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IBR PF01485.21 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.92 9.8 6.6 2.7 8.3 3.8 2.4 2 1 1 3 3 3 0 IBR domain, a half RING-finger domain PapB PF03333.13 NODE_75004_length_210_cov_2.320000_g67063_i0reverse_frame_1 - 0.086 12.9 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Adhesin biosynthesis transcription regulatory protein MatE PF01554.18 NODE_75002_length_210_cov_2.342857_g67061_i0forward_frame_1 - 8.4e-13 48.3 0.2 9.5e-13 48.1 0.2 1.0 1 0 0 1 1 1 1 MatE UBA PF00627.31 NODE_74999_length_210_cov_2.365714_g67058_i0forward_frame_1 - 0.0034 17.3 0.0 0.0048 16.8 0.0 1.3 1 0 0 1 1 1 1 UBA/TS-N domain Ycf1 PF05758.12 NODE_74997_length_210_cov_2.422857_g67056_i0reverse_frame_1 - 3 5.6 5.1 3.2 5.5 5.1 1.0 1 0 0 1 1 1 0 Ycf1 Phage_holin_3_6 PF07332.11 NODE_74997_length_210_cov_2.422857_g67056_i0forward_frame_1 - 5.6 7.0 9.7 3.9 7.6 8.4 1.4 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Transport_MerF PF11431.8 NODE_74988_length_210_cov_2.628571_g67047_i0reverse_frame_1 - 0.015 15.2 0.1 0.021 14.7 0.1 1.3 1 0 0 1 1 1 0 Membrane transport protein MerF DUF746 PF05344.11 NODE_74987_length_210_cov_2.640000_g67046_i0forward_frame_1 - 0.095 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) HlyIII PF03006.20 NODE_74985_length_210_cov_2.685714_g67044_i0reverse_frame_1 - 0.019 14.7 4.2 0.02 14.6 4.2 1.0 1 0 0 1 1 1 0 Haemolysin-III related Thioredoxin_2 PF13098.6 NODE_74980_length_210_cov_2.891429_g67039_i0forward_frame_1 - 0.13 12.7 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Xol-1_N PF09108.10 NODE_74978_length_210_cov_3.005714_g67037_i0reverse_frame_1 - 0.16 11.8 0.2 0.17 11.8 0.2 1.1 1 0 0 1 1 1 0 Switch protein XOL-1, N-terminal Op_neuropeptide PF08035.11 NODE_74975_length_210_cov_3.514286_g67034_i0reverse_frame_1 - 0.2 11.5 0.0 0.32 10.9 0.0 1.2 1 0 0 1 1 1 0 Opioids neuropeptide Glyco_hydro_1 PF00232.18 NODE_74975_length_210_cov_3.514286_g67034_i0forward_frame_1 - 4.3e-18 65.0 0.2 4.6e-18 64.9 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 KIAA1328 PF15369.6 NODE_74965_length_210_cov_16.845714_g67024_i0forward_frame_1 - 0.011 15.5 3.0 0.013 15.4 3.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein KIAA1328 JHD PF17811.1 NODE_74962_length_210_cov_24.120000_g67021_i0forward_frame_1 - 0.24 12.0 1.3 0.25 11.9 1.3 1.1 1 0 0 1 1 1 0 Jumonji helical domain Metallopep PF12044.8 NODE_74957_length_210_cov_29.622857_g67016_i0reverse_frame_1 - 0.061 11.9 0.1 0.062 11.9 0.1 1.0 1 0 0 1 1 1 0 Putative peptidase family Tom6 PF17112.5 NODE_74957_length_210_cov_29.622857_g67016_i0forward_frame_1 - 0.06 12.9 0.2 0.094 12.2 0.2 1.3 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom6, fungal YajC PF02699.15 NODE_74947_length_210_cov_43.594286_g67006_i0forward_frame_1 - 0.03 14.2 0.3 0.047 13.6 0.3 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit DUF1040 PF06288.13 NODE_74944_length_210_cov_44.662857_g67003_i0reverse_frame_1 - 0.063 13.7 1.5 0.38 11.2 1.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1040) DUF4574 PF15141.6 NODE_74938_length_210_cov_52.537143_g66997_i0reverse_frame_1 - 0.087 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Transpos_assoc PF13963.6 NODE_74938_length_210_cov_52.537143_g66997_i0forward_frame_1 - 0.12 12.7 0.1 0.12 12.7 0.1 1.5 2 0 0 2 2 2 0 Transposase-associated domain ProSAAS PF07259.12 NODE_74933_length_210_cov_55.394286_g66992_i0forward_frame_1 - 0.04 13.9 4.5 0.044 13.7 4.5 1.1 1 0 0 1 1 1 0 ProSAAS precursor GreA_GreB_N PF03449.15 NODE_74933_length_210_cov_55.394286_g66992_i0forward_frame_1 - 0.083 13.1 0.5 0.083 13.1 0.5 2.5 1 1 1 2 2 2 0 Transcription elongation factor, N-terminal Snurportin1 PF11538.8 NODE_74933_length_210_cov_55.394286_g66992_i0forward_frame_1 - 8.2 6.7 9.7 0.61 10.3 2.3 2.3 2 1 0 2 2 2 0 Snurportin1 Fe-ADH PF00465.19 NODE_74931_length_210_cov_56.908571_g66990_i0forward_frame_1 - 0.042 12.7 0.0 0.045 12.6 0.0 1.0 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase OppC_N PF12911.7 NODE_74906_length_210_cov_104.588571_g66965_i0reverse_frame_1 - 0.12 12.4 3.8 0.16 11.9 3.8 1.2 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C Toxin_33 PF08121.11 NODE_74900_length_210_cov_119.297143_g66959_i0reverse_frame_1 - 2 8.3 8.8 3.3 7.6 8.8 1.3 1 0 0 1 1 1 0 Waglerin family Rrn6 PF10214.9 NODE_74897_length_210_cov_175.765714_g66956_i0forward_frame_1 - 0.1 11.1 1.2 0.1 11.1 1.2 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Fer4_5 PF12801.7 NODE_74892_length_210_cov_349.291429_g66951_i0reverse_frame_1 - 0.16 11.9 1.9 0.21 11.6 0.1 1.9 2 0 0 2 2 2 0 4Fe-4S binding domain DapB_C PF05173.14 NODE_74890_length_210_cov_1114.005714_g66949_i0reverse_frame_1 - 0.04 13.9 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, C-terminus LacY_symp PF01306.19 NODE_74890_length_210_cov_1114.005714_g66949_i0forward_frame_1 - 0.016 14.0 2.0 0.016 14.0 2.0 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter DUF3885 PF13021.6 NODE_74883_length_211_cov_0.869318_g66942_i0forward_frame_3 - 0.092 12.9 0.3 0.26 11.4 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3885) UCH PF00443.29 NODE_74880_length_211_cov_0.903409_g66939_i0reverse_frame_2 - 0.076 12.5 0.0 0.081 12.4 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase MtrB PF05440.12 NODE_74876_length_211_cov_0.903409_g66935_i0reverse_frame_3 - 0.069 13.6 0.0 0.091 13.2 0.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B DUF4887 PF16228.5 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 8.7e-05 22.8 3.2 0.00011 22.5 3.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4887) DUF3584 PF12128.8 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.0035 15.0 1.7 0.0037 14.9 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF3450 PF11932.8 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.0061 15.9 3.8 0.0072 15.7 3.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) ZapB PF06005.12 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.015 15.7 4.8 0.018 15.4 4.8 1.2 1 0 0 1 1 1 0 Cell division protein ZapB Ehrlichia_rpt PF09528.10 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.026 14.0 2.2 0.04 13.4 2.2 1.4 1 0 0 1 1 1 0 Ehrlichia tandem repeat (Ehrlichia_rpt) DHR10 PF18595.1 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.048 13.7 7.8 0.054 13.5 7.8 1.0 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain XRN_N PF03159.18 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.058 12.8 1.9 0.062 12.7 1.9 1.0 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus MctB PF11382.8 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.076 12.7 0.5 0.08 12.6 0.5 1.1 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB NLRC4_HD PF17889.1 NODE_74865_length_211_cov_0.909091_g66924_i0forward_frame_3 - 0.027 14.8 0.1 0.029 14.7 0.1 1.1 1 0 0 1 1 1 0 NLRC4 helical domain ASFV_360 PF01671.16 NODE_74859_length_211_cov_0.909091_g66918_i0forward_frame_2 - 0.0021 17.6 0.7 0.0025 17.4 0.7 1.2 1 0 0 1 1 1 1 African swine fever virus multigene family 360 protein Glyco_hydro_28 PF00295.17 NODE_74859_length_211_cov_0.909091_g66918_i0forward_frame_2 - 0.19 10.7 5.4 1.2 8.2 4.4 1.9 1 1 1 2 2 2 0 Glycosyl hydrolases family 28 DUF2542 PF10808.8 NODE_74858_length_211_cov_0.909091_g66917_i0forward_frame_2 - 0.021 15.3 0.8 0.026 15.0 0.2 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2542) DUF2675 PF11247.8 NODE_74851_length_211_cov_0.909091_g66910_i0forward_frame_2 - 0.071 13.3 0.0 0.082 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2675) DUF2650 PF10853.8 NODE_74850_length_211_cov_0.909091_g66909_i0reverse_frame_3 - 0.025 14.3 0.4 0.052 13.3 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) DUF3915 PF13054.6 NODE_74848_length_211_cov_0.909091_g66907_i0reverse_frame_2 - 0.051 13.6 3.3 0.055 13.5 3.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) SelP_N PF04592.14 NODE_74848_length_211_cov_0.909091_g66907_i0reverse_frame_2 - 0.073 12.5 15.5 0.073 12.5 15.5 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Spem1 PF15670.5 NODE_74848_length_211_cov_0.909091_g66907_i0reverse_frame_2 - 1.1 8.7 10.5 1.2 8.6 10.5 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 DEAD PF00270.29 NODE_74847_length_211_cov_0.914773_g66906_i0reverse_frame_2 - 0.0029 17.4 0.1 0.0032 17.2 0.1 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF900 PF05990.12 NODE_74847_length_211_cov_0.914773_g66906_i0forward_frame_2 - 0.031 13.8 0.7 0.032 13.8 0.7 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) Microcin PF03526.13 NODE_74846_length_211_cov_0.943182_g66905_i0reverse_frame_3 - 0.0015 18.3 0.9 0.002 17.9 0.9 1.2 1 0 0 1 1 1 1 Colicin E1 (microcin) immunity protein Glyco_transf_8 PF01501.20 NODE_74844_length_211_cov_0.965909_g66903_i0reverse_frame_2 - 5.5e-08 32.7 0.1 6.6e-08 32.4 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 8 Cbl_N3 PF02762.14 NODE_74844_length_211_cov_0.965909_g66903_i0forward_frame_3 - 0.075 12.9 0.2 0.083 12.8 0.2 1.1 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, SH2-like domain Presenilin PF01080.17 NODE_74844_length_211_cov_0.965909_g66903_i0forward_frame_3 - 0.13 11.0 0.0 0.14 10.9 0.0 1.0 1 0 0 1 1 1 0 Presenilin Lamprin PF06403.11 NODE_74842_length_211_cov_1.000000_g66901_i0forward_frame_2 - 0.078 12.9 0.6 0.089 12.8 0.2 1.3 2 0 0 2 2 2 0 Lamprin pPIWI_RE_REase PF18154.1 NODE_74841_length_211_cov_1.034091_g66900_i0reverse_frame_3 - 0.13 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 REase associating with pPIWI_RE DUF2726 PF10881.8 NODE_74840_length_211_cov_1.039773_g66899_i0reverse_frame_2 - 0.11 12.4 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2726) BAG PF02179.16 NODE_74828_length_211_cov_1.102273_g66887_i0forward_frame_2 - 0.17 12.4 0.0 0.25 11.8 0.0 1.2 1 0 0 1 1 1 0 BAG domain APCDDC PF14921.6 NODE_74824_length_211_cov_1.119318_g66883_i0forward_frame_3 - 0.025 14.0 0.2 0.027 13.9 0.2 1.0 1 0 0 1 1 1 0 Adenomatosis polyposis coli down-regulated 1 DUF956 PF06115.11 NODE_74823_length_211_cov_1.125000_g66882_i0forward_frame_2 - 0.17 11.6 0.1 0.19 11.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF956) LRR_6 PF13516.6 NODE_74822_length_211_cov_1.125000_g66881_i0reverse_frame_3 - 2.5e-05 23.9 0.2 2.5e-05 23.9 0.2 1.8 2 0 0 2 2 2 1 Leucine Rich repeat LRR_1 PF00560.33 NODE_74822_length_211_cov_1.125000_g66881_i0reverse_frame_3 - 0.17 12.5 1.1 17 6.4 0.1 2.4 2 1 0 2 2 2 0 Leucine Rich Repeat LRR_4 PF12799.7 NODE_74822_length_211_cov_1.125000_g66881_i0reverse_frame_3 - 1.1 9.8 5.9 6.3 7.4 5.9 2.1 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) Lys_export PF03956.13 NODE_74821_length_211_cov_1.130682_g66880_i0reverse_frame_2 - 0.034 13.7 0.0 0.048 13.2 0.0 1.2 1 0 0 1 1 1 0 Lysine exporter LysO Androgen_recep PF02166.16 NODE_74816_length_211_cov_1.136364_g66875_i0forward_frame_3 - 0.034 13.0 0.1 0.036 12.9 0.1 1.0 1 0 0 1 1 1 0 Androgen receptor Chlam_PMP PF02415.17 NODE_74813_length_211_cov_1.159091_g66872_i0reverse_frame_3 - 0.0048 17.3 11.7 0.02 15.4 0.4 2.8 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Toxin_ToxA PF11584.8 NODE_74811_length_211_cov_1.170455_g66870_i0reverse_frame_2 - 0.2 11.7 0.1 0.23 11.5 0.1 1.0 1 0 0 1 1 1 0 Proteinaceous host-selective toxin ToxA CPSase_L_D2 PF02786.17 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 5.7e-13 48.8 0.1 6e-13 48.8 0.1 1.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.6 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 4.4e-08 32.9 0.1 5e-08 32.8 0.1 1.0 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 4.3e-06 26.9 0.0 4.9e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 2.9e-05 23.7 0.0 3.5e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 0.026 14.0 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus SpdB PF05122.13 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_2 - 0.079 13.1 5.2 0.14 12.4 5.2 1.4 1 0 0 1 1 1 0 Mobile element transfer protein IDH PF03971.14 NODE_74806_length_211_cov_1.204545_g66865_i0reverse_frame_3 - 0.056 11.9 0.2 0.066 11.6 0.2 1.0 1 0 0 1 1 1 0 Monomeric isocitrate dehydrogenase HMw1_D2 PF18254.1 NODE_74800_length_211_cov_1.244318_g66859_i0forward_frame_3 - 0.0065 16.8 0.0 0.0068 16.7 0.0 1.1 1 0 0 1 1 1 1 HMW1 domain 2 PIEZO PF15917.5 NODE_74797_length_211_cov_1.250000_g66856_i0forward_frame_3 - 3.2 7.2 5.9 3.5 7.0 5.9 1.0 1 0 0 1 1 1 0 Piezo DUF4106 PF13388.6 NODE_74794_length_211_cov_1.295455_g66853_i0reverse_frame_2 - 1.3 8.2 2.2 1.2 8.3 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) VEGF_C PF14554.6 NODE_74792_length_211_cov_1.306818_g66851_i0reverse_frame_2 - 0.039 14.1 0.4 0.64 10.2 0.0 2.1 2 0 0 2 2 2 0 VEGF heparin-binding domain MSC PF09402.10 NODE_74790_length_211_cov_1.318182_g66849_i0reverse_frame_2 - 0.13 11.7 0.9 0.15 11.5 0.9 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain ArlS_N PF18719.1 NODE_74787_length_211_cov_1.335227_g66846_i0reverse_frame_3 - 0.019 15.2 0.4 0.023 14.9 0.4 1.1 1 0 0 1 1 1 0 ArlS sensor domain TPR_12 PF13424.6 NODE_74787_length_211_cov_1.335227_g66846_i0reverse_frame_3 - 0.03 14.6 0.0 0.034 14.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Adeno_E4 PF05385.11 NODE_74785_length_211_cov_1.346591_g66844_i0forward_frame_3 - 0.023 14.8 1.7 0.026 14.6 1.7 1.1 1 0 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein DUF4871 PF16167.5 NODE_74783_length_211_cov_1.357955_g66842_i0forward_frame_3 - 0.086 12.9 0.0 0.092 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) DUF553 PF04473.12 NODE_74782_length_211_cov_1.357955_g66841_i0reverse_frame_2 - 0.025 14.1 0.0 0.025 14.1 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase-like domain PTEN_C2 PF10409.9 NODE_74782_length_211_cov_1.357955_g66841_i0forward_frame_3 - 0.053 13.3 0.0 0.06 13.1 0.0 1.1 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein DUF2070 PF09843.9 NODE_74782_length_211_cov_1.357955_g66841_i0forward_frame_3 - 0.15 10.4 0.1 0.19 10.0 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Fer2_3 PF13085.6 NODE_74781_length_211_cov_1.357955_g66840_i0forward_frame_3 - 0.045 13.8 0.0 0.047 13.7 0.0 1.1 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF2860 PF11059.8 NODE_74777_length_211_cov_1.357955_g66836_i0reverse_frame_2 - 0.043 13.1 0.0 0.047 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2860) PriA_CRR PF18319.1 NODE_74772_length_211_cov_1.363636_g66831_i0reverse_frame_2 - 0.023 14.7 6.3 1 9.4 0.8 2.4 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain Peptidase_S29 PF02907.15 NODE_74771_length_211_cov_1.363636_g66830_i0reverse_frame_3 - 0.067 12.9 0.0 0.071 12.9 0.0 1.1 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease Fer4_15 PF13459.6 NODE_74766_length_211_cov_1.363636_g66825_i0reverse_frame_2 - 0.0084 16.8 2.0 0.011 16.4 2.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain MrpF_PhaF PF04066.13 NODE_74757_length_211_cov_1.426136_g66816_i0reverse_frame_2 - 0.19 12.1 0.5 0.24 11.8 0.5 1.2 1 0 0 1 1 1 0 Multiple resistance and pH regulation protein F (MrpF / PhaF) NICE-1 PF15845.5 NODE_74753_length_211_cov_1.448864_g66812_i0reverse_frame_2 - 0.12 13.2 5.6 0.14 12.9 5.6 1.2 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family HEPN_SAV2148 PF18725.1 NODE_74753_length_211_cov_1.448864_g66812_i0forward_frame_2 - 0.096 12.1 0.3 0.13 11.7 0.3 1.2 1 0 0 1 1 1 0 SAV2148-like HEPN ANAPC4 PF12896.7 NODE_74738_length_211_cov_1.545455_g66797_i0reverse_frame_3 - 0.065 12.7 0.0 0.082 12.4 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 Ribosomal_L41 PF05162.13 NODE_74736_length_211_cov_1.556818_g66795_i0reverse_frame_3 - 0.15 12.1 3.8 0.24 11.5 3.8 1.3 1 0 0 1 1 1 0 Ribosomal protein L41 DUF5581 PF17744.1 NODE_74734_length_211_cov_1.568182_g66793_i0reverse_frame_3 - 0.039 13.3 2.9 0.05 13.0 2.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5581) BCCT PF02028.17 NODE_74733_length_211_cov_1.573864_g66792_i0forward_frame_3 - 0.14 10.6 0.2 0.14 10.6 0.2 1.0 1 0 0 1 1 1 0 BCCT, betaine/carnitine/choline family transporter DUF2623 PF11115.8 NODE_74718_length_211_cov_1.653409_g66777_i0reverse_frame_3 - 0.021 14.9 0.4 0.046 13.8 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2623) Latrotoxin_C PF15658.6 NODE_74717_length_211_cov_1.664773_g66776_i0forward_frame_2 - 0.0072 16.1 1.0 0.008 15.9 1.0 1.1 1 0 0 1 1 1 1 Latrotoxin C-terminal domain PGM_PMM_III PF02880.16 NODE_74715_length_211_cov_1.676136_g66774_i0reverse_frame_2 - 0.11 12.7 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Zn_clus PF00172.18 NODE_74715_length_211_cov_1.676136_g66774_i0reverse_frame_2 - 0.83 9.8 12.4 15 5.8 10.8 2.2 1 1 1 2 2 2 0 Fungal Zn(2)-Cys(6) binuclear cluster domain Lamprin PF06403.11 NODE_74714_length_211_cov_1.693182_g66773_i0reverse_frame_3 - 0.74 9.8 5.0 0.99 9.4 5.0 1.3 1 0 0 1 1 1 0 Lamprin DUF4605 PF15378.6 NODE_74714_length_211_cov_1.693182_g66773_i0reverse_frame_3 - 6 6.8 9.2 1.6 8.6 1.4 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4605) Lamprin PF06403.11 NODE_74714_length_211_cov_1.693182_g66773_i0reverse_frame_2 - 6.2 6.8 9.8 9.6 6.2 9.7 1.6 1 1 0 1 1 1 0 Lamprin DUF5472 PF17566.2 NODE_74704_length_211_cov_1.778409_g66763_i0reverse_frame_2 - 0.061 13.3 0.0 0.075 13.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) Creb_binding PF09030.10 NODE_74703_length_211_cov_1.784091_g66762_i0forward_frame_3 - 0.076 13.7 0.0 0.1 13.3 0.0 1.2 1 0 0 1 1 1 0 Creb binding RuvC_1 PF18516.1 NODE_74702_length_211_cov_1.784091_g66761_i0forward_frame_2 - 0.0079 15.4 0.1 0.0089 15.2 0.1 1.1 1 0 0 1 1 1 1 RuvC nuclease domain GFA PF04828.14 NODE_74699_length_211_cov_1.795455_g66758_i0reverse_frame_3 - 0.095 13.1 0.6 0.11 12.9 0.6 1.3 1 1 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme BCAS3 PF12490.8 NODE_74696_length_211_cov_1.806818_g66755_i0reverse_frame_2 - 0.016 14.7 0.0 0.018 14.6 0.0 1.0 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 CENP-Q PF13094.6 NODE_74696_length_211_cov_1.806818_g66755_i0forward_frame_3 - 0.02 15.1 0.0 0.022 15.0 0.0 1.0 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit EcsB PF05975.12 NODE_74692_length_211_cov_1.835227_g66751_i0forward_frame_3 - 0.032 13.1 3.9 0.033 13.0 3.9 1.0 1 0 0 1 1 1 0 Bacterial ABC transporter protein EcsB DUF5345 PF17280.2 NODE_74692_length_211_cov_1.835227_g66751_i0forward_frame_3 - 1.6 8.7 8.2 2.3 8.2 8.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5345) Peptidase_S49 PF01343.18 NODE_74690_length_211_cov_1.869318_g66749_i0forward_frame_3 - 4.5e-15 55.9 0.0 4.8e-15 55.8 0.0 1.0 1 0 0 1 1 1 1 Peptidase family S49 O-antigen_lig PF13425.6 NODE_74687_length_211_cov_1.880682_g66746_i0reverse_frame_3 - 0.036 12.8 4.1 0.04 12.7 4.1 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Anoctamin PF04547.12 NODE_74687_length_211_cov_1.880682_g66746_i0reverse_frame_3 - 0.33 9.7 3.0 0.37 9.6 3.0 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel TMEM156 PF15106.6 NODE_74687_length_211_cov_1.880682_g66746_i0reverse_frame_3 - 3 7.2 5.0 3.3 7.1 5.0 1.0 1 0 0 1 1 1 0 TMEM156 protein family Lamprin PF06403.11 NODE_74686_length_211_cov_1.880682_g66745_i0forward_frame_3 - 4.2 7.3 18.0 1.2 9.0 8.9 2.1 1 1 1 2 2 2 0 Lamprin Staph_opine_DH PF10100.9 NODE_74685_length_211_cov_1.886364_g66744_i0forward_frame_3 - 0.091 11.4 0.3 0.096 11.3 0.3 1.0 1 0 0 1 1 1 0 Staphylopine dehydrogenase Ribosomal_L9_C PF03948.14 NODE_74680_length_211_cov_1.926136_g66739_i0forward_frame_3 - 0.1 13.1 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L9, C-terminal domain Seryl_tRNA_N PF02403.22 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 1.6e-13 50.8 8.7 1.8e-13 50.7 8.7 1.0 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF3713 PF12506.8 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 0.026 14.8 3.6 0.03 14.6 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3713) DUF3145 PF11343.8 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 0.026 14.1 0.0 0.03 13.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3145) DASH_Dad3 PF08656.10 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 0.093 12.8 2.5 0.092 12.8 1.3 1.6 1 1 1 2 2 2 0 DASH complex subunit Dad3 FlxA PF14282.6 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 7.4 6.6 15.5 0.64 10.0 2.9 2.1 1 1 1 2 2 2 0 FlxA-like protein DUF3295 PF11702.8 NODE_74678_length_211_cov_1.954545_g66737_i0reverse_frame_2 - 0.023 14.1 0.1 0.024 14.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) AMP-binding PF00501.28 NODE_74676_length_211_cov_1.960227_g66735_i0reverse_frame_3 - 0.0038 15.9 0.0 0.0039 15.8 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme DAPG_hydrolase PF18089.1 NODE_74673_length_211_cov_2.000000_g66732_i0forward_frame_3 - 0.27 10.8 0.2 0.32 10.5 0.2 1.1 1 0 0 1 1 1 0 DAPG hydrolase PhiG domain Band_7_C PF16200.5 NODE_74672_length_211_cov_2.005682_g66731_i0reverse_frame_2 - 0.086 12.9 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 C-terminal region of band_7 Kinesin PF00225.23 NODE_74670_length_211_cov_2.028409_g66729_i0reverse_frame_3 - 2.6e-18 66.0 0.3 2.7e-18 66.0 0.3 1.0 1 0 0 1 1 1 1 Kinesin motor domain Calc_CGRP_IAPP PF00214.19 NODE_74662_length_211_cov_2.102273_g66721_i0forward_frame_2 - 0.019 15.3 1.9 0.022 15.1 1.9 1.1 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family Cytochrom_B559 PF00283.19 NODE_74661_length_211_cov_2.119318_g66720_i0forward_frame_2 - 0.084 12.3 1.4 0.13 11.7 1.4 1.2 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Ribosomal_L34e PF01199.18 NODE_74657_length_211_cov_2.159091_g66716_i0reverse_frame_2 - 0.091 13.1 0.1 0.11 12.9 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L34e PRK PF00485.18 NODE_74657_length_211_cov_2.159091_g66716_i0forward_frame_2 - 4.8e-05 23.2 0.1 5.9e-05 22.9 0.1 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family SNARE PF05739.19 NODE_74656_length_211_cov_2.164773_g66715_i0reverse_frame_3 - 0.29 11.2 1.3 0.4 10.7 1.3 1.1 1 0 0 1 1 1 0 SNARE domain DUF2833 PF11090.8 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_2 - 0.41 11.0 3.8 0.5 10.8 3.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2833) Pkinase_Tyr PF07714.17 NODE_74647_length_211_cov_2.244318_g66706_i0reverse_frame_3 - 0.0011 18.3 0.2 0.0011 18.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_74647_length_211_cov_2.244318_g66706_i0reverse_frame_3 - 0.037 13.4 0.2 0.039 13.3 0.2 1.0 1 0 0 1 1 1 0 Protein kinase domain T4-Gluco-transf PF09198.10 NODE_74646_length_211_cov_2.255682_g66705_i0forward_frame_2 - 0.046 13.3 1.0 0.094 12.3 1.0 1.6 1 0 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase Ferlin_C PF16165.5 NODE_74642_length_211_cov_2.267045_g66701_i0reverse_frame_3 - 0.14 12.1 0.5 0.16 11.9 0.5 1.1 1 0 0 1 1 1 0 Ferlin C-terminus SURF1 PF02104.15 NODE_74642_length_211_cov_2.267045_g66701_i0forward_frame_3 - 0.11 12.7 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 SURF1 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks350.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks350.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks350.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks350.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:06:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PGI PF00342.19 NODE_74636_length_211_cov_2.477273_g66695_i0reverse_frame_3 - 2.7e-23 82.3 0.9 2.9e-23 82.2 0.9 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase DDDD PF10161.9 NODE_74636_length_211_cov_2.477273_g66695_i0reverse_frame_3 - 0.13 12.0 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Putative mitochondrial precursor protein Fungal_TACC PF12709.7 NODE_74633_length_211_cov_2.573864_g66692_i0reverse_frame_3 - 0.0052 17.2 4.0 0.0061 17.0 4.0 1.2 1 0 0 1 1 1 1 Fungal Transforming acidic coiled-coil (TACC) proteins YabA PF06156.13 NODE_74633_length_211_cov_2.573864_g66692_i0reverse_frame_3 - 0.017 15.7 6.2 0.02 15.5 6.2 1.1 1 0 0 1 1 1 0 Initiation control protein YabA DUF4954 PF16314.5 NODE_74633_length_211_cov_2.573864_g66692_i0forward_frame_3 - 3.2 5.8 5.8 3.6 5.6 5.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Chloroa_b-bind PF00504.21 NODE_74632_length_211_cov_2.573864_g66691_i0reverse_frame_2 - 3.9e-08 34.0 0.0 3.9e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Erv26 PF04148.13 NODE_74631_length_211_cov_2.573864_g66690_i0forward_frame_2 - 0.06 13.2 2.8 0.064 13.1 2.8 1.0 1 0 0 1 1 1 0 Transmembrane adaptor Erv26 ANAPC4_WD40 PF12894.7 NODE_74630_length_211_cov_2.579545_g66689_i0forward_frame_3 - 0.0036 17.6 0.0 0.0046 17.2 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain DTC PF18102.1 NODE_74628_length_211_cov_2.590909_g66687_i0reverse_frame_2 - 9.2e-10 38.8 0.2 1.4e-09 38.1 0.2 1.3 1 0 0 1 1 1 1 Deltex C-terminal domain Peptidase_C24 PF03510.14 NODE_74625_length_211_cov_2.710227_g66684_i0reverse_frame_2 - 0.087 13.3 0.0 0.1 13.1 0.0 1.1 1 0 0 1 1 1 0 2C endopeptidase (C24) cysteine protease family DUF3785 PF12653.7 NODE_74620_length_211_cov_2.778409_g66679_i0reverse_frame_3 - 0.0074 16.4 0.6 0.01 15.9 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3785) SMI1_KNR4 PF09346.10 NODE_74618_length_211_cov_2.806818_g66677_i0reverse_frame_3 - 0.051 14.0 0.1 0.052 13.9 0.1 1.1 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) LolB PF03550.14 NODE_74617_length_211_cov_2.812500_g66676_i0reverse_frame_2 - 3.4e-18 66.1 0.1 3.6e-18 66.1 0.1 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein LolB FAA_hydrolase PF01557.18 NODE_74616_length_211_cov_2.852273_g66675_i0reverse_frame_2 - 2.9e-07 30.4 0.0 3.1e-07 30.3 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Lamprin PF06403.11 NODE_74615_length_211_cov_2.863636_g66674_i0forward_frame_3 - 3 7.8 7.0 2.9 7.9 1.0 2.0 1 1 1 2 2 2 0 Lamprin Tautomerase_2 PF14552.6 NODE_74613_length_211_cov_2.965909_g66672_i0forward_frame_2 - 0.061 13.4 0.0 0.069 13.3 0.0 1.1 1 0 0 1 1 1 0 Tautomerase enzyme DUF4358 PF14270.6 NODE_74613_length_211_cov_2.965909_g66672_i0forward_frame_2 - 0.093 13.0 0.0 0.1 12.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4358) Ac81 PF05820.11 NODE_74612_length_211_cov_3.062500_g66671_i0reverse_frame_3 - 0.97 9.0 7.6 1.1 8.8 7.6 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 IBB PF01749.20 NODE_74611_length_211_cov_3.090909_g66670_i0reverse_frame_3 - 0.046 14.2 2.4 0.05 14.1 2.4 1.1 1 0 0 1 1 1 0 Importin beta binding domain DUF1564 PF07600.11 NODE_74611_length_211_cov_3.090909_g66670_i0reverse_frame_3 - 0.087 12.5 3.7 0.099 12.3 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) Methuselah_N PF06652.12 NODE_74607_length_211_cov_3.528409_g66666_i0forward_frame_2 - 0.17 11.8 0.0 0.18 11.7 0.0 1.0 1 0 0 1 1 1 0 Methuselah N-terminus LAT PF15234.6 NODE_74606_length_211_cov_3.534091_g66665_i0reverse_frame_3 - 1.3 8.7 2.5 1.4 8.6 2.5 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells Kelch_3 PF13415.6 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 7.6e-11 42.0 0.0 4.2e-09 36.5 0.0 2.0 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 1.8e-08 34.3 1.2 7.8e-05 22.6 0.3 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 6.9e-08 31.9 0.4 0.00014 21.4 0.2 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 8.6e-07 28.8 1.4 0.0083 16.1 0.6 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 2.1e-06 27.8 0.4 0.0011 19.2 0.1 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 1.8e-05 24.5 1.8 0.055 13.5 0.4 2.1 2 0 0 2 2 2 2 Kelch motif DUF4724 PF15852.5 NODE_74603_length_211_cov_4.511364_g66662_i0forward_frame_3 - 0.016 15.7 0.0 0.019 15.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4724) Hemocyanin_N PF03722.14 NODE_74602_length_211_cov_4.784091_g66661_i0reverse_frame_3 - 0.13 12.8 0.1 0.18 12.4 0.1 1.2 1 0 0 1 1 1 0 Hemocyanin, all-alpha domain Trp_syntA PF00290.20 NODE_74601_length_211_cov_4.982955_g66660_i0reverse_frame_2 - 3.3e-22 78.6 0.0 3.5e-22 78.5 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain Dynein_AAA_lid PF17852.1 NODE_74597_length_211_cov_7.971591_g66656_i0reverse_frame_2 - 0.12 12.5 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain DUF5480 PF17576.2 NODE_74596_length_211_cov_8.267045_g66655_i0reverse_frame_3 - 0.71 9.9 4.6 0.91 9.5 4.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5480) EndIII_4Fe-2S PF10576.9 NODE_74593_length_211_cov_15.926136_g66652_i0forward_frame_2 - 7.1 7.1 8.1 0.39 11.1 1.9 2.1 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III NICE-1 PF15845.5 NODE_74591_length_211_cov_23.295455_g66650_i0reverse_frame_2 - 3.5 8.5 8.3 16 6.3 2.7 2.1 1 1 1 2 2 2 0 Cysteine-rich C-terminal 1 family LisH PF08513.11 NODE_74589_length_211_cov_25.568182_g66648_i0reverse_frame_2 - 0.004 17.1 0.0 0.021 14.8 0.0 2.0 2 0 0 2 2 2 1 LisH CDV3 PF15359.6 NODE_74585_length_211_cov_27.238636_g66644_i0reverse_frame_2 - 0.16 12.4 1.8 0.2 12.2 1.8 1.2 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 SH3_2 PF07653.17 NODE_74585_length_211_cov_27.238636_g66644_i0forward_frame_2 - 1.1 9.0 3.1 1.6 8.4 3.1 1.4 1 1 0 1 1 1 0 Variant SH3 domain Ferlin_C PF16165.5 NODE_74580_length_211_cov_31.994318_g66639_i0reverse_frame_2 - 0.02 14.9 0.6 0.025 14.5 0.6 1.1 1 0 0 1 1 1 0 Ferlin C-terminus Toxin-deaminase PF14424.6 NODE_74576_length_211_cov_39.488636_g66635_i0forward_frame_2 - 0.001 19.2 0.2 0.0018 18.4 0.1 1.4 1 1 1 2 2 2 1 The BURPS668_1122 family of deaminases Acid_PPase PF12689.7 NODE_74574_length_211_cov_40.681818_g66633_i0reverse_frame_3 - 0.0052 16.6 0.0 0.0061 16.4 0.0 1.1 1 0 0 1 1 1 1 Acid Phosphatase GP3 PF03076.14 NODE_74571_length_211_cov_43.517045_g66630_i0reverse_frame_2 - 0.18 11.9 1.1 0.22 11.6 1.1 1.1 1 0 0 1 1 1 0 Equine arteritis virus GP3 SpoVR PF04293.13 NODE_74570_length_211_cov_44.289773_g66629_i0forward_frame_2 - 0.3 9.7 4.7 0.33 9.6 4.7 1.0 1 0 0 1 1 1 0 SpoVR like protein Coilin_N PF15862.5 NODE_74570_length_211_cov_44.289773_g66629_i0forward_frame_2 - 4.2 7.2 11.9 4.4 7.1 11.9 1.1 1 0 0 1 1 1 0 Coilin N-terminus MWFE PF15879.5 NODE_74567_length_211_cov_45.460227_g66626_i0reverse_frame_3 - 0.13 12.5 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit DUF4752 PF15944.5 NODE_74562_length_211_cov_48.931818_g66621_i0reverse_frame_3 - 0.085 12.9 0.6 0.11 12.6 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) Rtf2 PF04641.12 NODE_74559_length_211_cov_50.914773_g66618_i0forward_frame_2 - 0.067 12.5 0.0 0.074 12.4 0.0 1.0 1 0 0 1 1 1 0 Rtf2 RING-finger Gram_pos_anchor PF00746.21 NODE_74557_length_211_cov_53.164773_g66616_i0reverse_frame_3 - 0.026 14.5 2.1 0.033 14.1 2.1 1.2 1 0 0 1 1 1 0 LPXTG cell wall anchor motif PTR2 PF00854.21 NODE_74557_length_211_cov_53.164773_g66616_i0reverse_frame_3 - 0.05 12.4 0.0 0.058 12.2 0.0 1.0 1 0 0 1 1 1 0 POT family DAP10 PF07213.11 NODE_74557_length_211_cov_53.164773_g66616_i0reverse_frame_3 - 0.091 12.7 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 DAP10 membrane protein zf-CCCH_3 PF15663.5 NODE_74555_length_211_cov_57.767045_g66614_i0reverse_frame_3 - 0.14 12.4 0.0 0.16 12.2 0.0 1.0 1 0 0 1 1 1 0 Zinc-finger containing family TPR_3 PF07720.12 NODE_74551_length_211_cov_67.181818_g66610_i0reverse_frame_3 - 0.1 12.6 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Defensin_5 PF18251.1 NODE_74551_length_211_cov_67.181818_g66610_i0reverse_frame_2 - 0.15 12.2 7.4 0.22 11.6 7.4 1.3 1 0 0 1 1 1 0 Fungal defensin Copsin Pollen_Ole_e_I PF01190.17 NODE_74549_length_211_cov_67.465909_g66608_i0forward_frame_2 - 0.17 12.3 0.0 0.2 12.1 0.0 1.1 1 0 0 1 1 1 0 Pollen proteins Ole e I like UDPG_MGDP_dh PF00984.19 NODE_74543_length_211_cov_69.284091_g66602_i0reverse_frame_3 - 0.19 12.0 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, central domain ASTN_2_hairpin PF18577.1 NODE_74543_length_211_cov_69.284091_g66602_i0forward_frame_2 - 0.11 12.6 0.3 0.16 12.1 0.3 1.3 1 0 0 1 1 1 0 Astrotactin-2 C-terminal beta-hairpin domain DUF2682 PF10909.8 NODE_74541_length_211_cov_71.164773_g66600_i0reverse_frame_2 - 0.037 14.5 0.3 0.042 14.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2682) LSDAT_euk PF18139.1 NODE_74539_length_211_cov_77.551136_g66598_i0reverse_frame_2 - 0.1 12.0 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 SLOG in TRPM Cas6b_C PF17262.2 NODE_74536_length_211_cov_86.715909_g66595_i0reverse_frame_3 - 0.013 15.6 0.2 0.015 15.4 0.2 1.0 1 0 0 1 1 1 0 Cas6b C-terminal domain Fer4 PF00037.27 NODE_74535_length_211_cov_92.619318_g66594_i0reverse_frame_2 - 0.038 13.8 1.1 0.57 10.1 0.4 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain K_channel_TID PF07941.11 NODE_74534_length_211_cov_94.437500_g66593_i0reverse_frame_2 - 0.01 16.3 1.9 0.012 16.1 1.9 1.2 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain DUF4559 PF15112.6 NODE_74528_length_211_cov_112.204545_g66587_i0reverse_frame_2 - 0.097 12.3 0.0 0.1 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) DUF1106 PF06523.11 NODE_74518_length_211_cov_166.744318_g66577_i0forward_frame_3 - 0.0016 18.5 1.6 0.0017 18.3 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1106) Ribosomal_L32p PF01783.23 NODE_74513_length_211_cov_355.727273_g66572_i0reverse_frame_2 - 0.019 15.2 0.6 0.023 14.9 0.6 1.2 1 0 0 1 1 1 0 Ribosomal L32p protein family DOR PF14839.6 NODE_74513_length_211_cov_355.727273_g66572_i0reverse_frame_2 - 0.027 14.4 0.0 0.03 14.3 0.0 1.0 1 0 0 1 1 1 0 DOR family zf-C2H2_11 PF16622.5 NODE_74513_length_211_cov_355.727273_g66572_i0forward_frame_2 - 0.083 12.7 0.9 0.083 12.7 0.9 1.8 2 0 0 2 2 2 0 zinc-finger C2H2-type YajC PF02699.15 NODE_74512_length_211_cov_995.221591_g66571_i0forward_frame_2 - 1.6 8.7 3.1 2.3 8.2 3.1 1.5 1 1 0 1 1 1 0 Preprotein translocase subunit Peptidase_S49_N PF08496.10 NODE_74509_length_211_cov_66333.897727_g66568_i0reverse_frame_3 - 3.9 7.5 8.7 4.3 7.4 8.7 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF2663 PF10864.8 NODE_74508_length_211_cov_87743.380682_g66567_i0reverse_frame_2 - 0.00066 20.1 0.1 0.00069 20.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2663) MCRA PF06100.11 NODE_74508_length_211_cov_87743.380682_g66567_i0forward_frame_3 - 0.25 10.1 1.1 0.27 10.0 1.1 1.0 1 0 0 1 1 1 0 MCRA family AGS_C PF18134.1 NODE_74507_length_212_cov_0.824859_g66566_i0reverse_frame_3 - 0.044 13.8 0.3 0.046 13.7 0.3 1.0 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain DUF1005 PF06219.12 NODE_74506_length_212_cov_0.841808_g66565_i0forward_frame_2 - 0.15 11.1 1.0 0.17 10.9 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1005) DUF5549 PF17703.1 NODE_74503_length_212_cov_0.898305_g66562_i0reverse_frame_3 - 0.015 15.0 0.9 0.015 15.0 0.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5549) DUF3915 PF13054.6 NODE_74503_length_212_cov_0.898305_g66562_i0reverse_frame_3 - 0.2 11.7 4.0 0.24 11.4 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_74503_length_212_cov_0.898305_g66562_i0reverse_frame_3 - 4.2 5.5 5.4 4.9 5.3 5.4 1.1 1 0 0 1 1 1 0 Atrophin-1 family Atrophin-1 PF03154.15 NODE_74503_length_212_cov_0.898305_g66562_i0reverse_frame_2 - 3.3 5.9 4.2 4 5.6 4.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family SLBP_RNA_bind PF15247.6 NODE_74499_length_212_cov_0.898305_g66558_i0forward_frame_2 - 0.1 12.7 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain Flu_M2 PF00599.17 NODE_74495_length_212_cov_0.903955_g66554_i0reverse_frame_2 - 0.14 12.2 0.1 0.21 11.7 0.0 1.4 1 1 0 1 1 1 0 Influenza Matrix protein (M2) DUF4028 PF13220.6 NODE_74492_length_212_cov_0.903955_g66551_i0reverse_frame_2 - 0.04 13.7 0.2 0.052 13.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) GT87 PF09594.10 NODE_74492_length_212_cov_0.903955_g66551_i0forward_frame_2 - 0.017 14.8 0.1 0.018 14.8 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 87 DUF3852 PF12963.7 NODE_74492_length_212_cov_0.903955_g66551_i0forward_frame_2 - 0.019 15.3 0.7 0.02 15.2 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3852) LrgB PF04172.16 NODE_74492_length_212_cov_0.903955_g66551_i0forward_frame_2 - 0.045 13.3 0.6 0.053 13.0 0.6 1.0 1 0 0 1 1 1 0 LrgB-like family Sortilin_C PF15901.5 NODE_74491_length_212_cov_0.903955_g66550_i0reverse_frame_3 - 0.044 14.1 0.0 0.053 13.9 0.0 1.2 1 0 0 1 1 1 0 Sortilin, neurotensin receptor 3, C-terminal DUF1435 PF07256.12 NODE_74491_length_212_cov_0.903955_g66550_i0forward_frame_3 - 0.0049 16.9 0.0 0.0058 16.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1435) VEGF_C PF14554.6 NODE_74485_length_212_cov_0.903955_g66544_i0reverse_frame_2 - 0.0015 18.6 0.3 0.0018 18.3 0.3 1.2 1 0 0 1 1 1 1 VEGF heparin-binding domain Dynamin_M PF01031.20 NODE_74483_length_212_cov_0.903955_g66542_i0reverse_frame_2 - 1.5e-08 34.2 0.0 1.7e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 NODE_74483_length_212_cov_0.903955_g66542_i0reverse_frame_2 - 0.033 14.3 0.0 0.04 14.0 0.0 1.1 1 0 0 1 1 1 0 Dynamin family GAGA PF09237.11 NODE_74482_length_212_cov_0.903955_g66541_i0reverse_frame_2 - 0.19 11.6 1.0 0.56 10.1 1.0 1.8 1 1 0 1 1 1 0 GAGA factor Herpes_US9 PF06072.11 NODE_74481_length_212_cov_0.903955_g66540_i0forward_frame_2 - 0.074 12.9 0.9 0.1 12.5 0.9 1.2 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 Lig_C PF18330.1 NODE_74479_length_212_cov_0.903955_g66538_i0reverse_frame_3 - 0.04 13.9 0.3 0.043 13.8 0.3 1.1 1 0 0 1 1 1 0 Ligase Pab1020 C-terminal region NS3_envE PF02723.14 NODE_74479_length_212_cov_0.903955_g66538_i0forward_frame_2 - 0.44 10.7 10.4 0.54 10.4 10.4 1.3 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Gemini_mov PF01708.16 NODE_74479_length_212_cov_0.903955_g66538_i0forward_frame_2 - 0.88 9.4 2.8 1.2 9.0 2.8 1.2 1 0 0 1 1 1 0 Geminivirus putative movement protein ASC PF00858.24 NODE_74479_length_212_cov_0.903955_g66538_i0forward_frame_2 - 5.7 5.8 9.7 8.3 5.2 9.7 1.5 1 1 0 1 1 1 0 Amiloride-sensitive sodium channel Hyd_WA PF06462.12 NODE_74478_length_212_cov_0.903955_g66537_i0reverse_frame_2 - 4.1 7.5 6.5 5.7 7.0 6.5 1.5 1 1 0 1 1 1 0 Propeller DUF1098 PF06497.11 NODE_74477_length_212_cov_0.903955_g66536_i0reverse_frame_2 - 0.11 13.0 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1098) DUF2207 PF09972.9 NODE_74474_length_212_cov_0.920904_g66533_i0reverse_frame_2 - 4.6 5.9 5.0 5 5.8 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Serglycin PF04360.12 NODE_74474_length_212_cov_0.920904_g66533_i0forward_frame_3 - 0.22 11.5 7.0 0.24 11.4 7.0 1.1 1 0 0 1 1 1 0 Serglycin CCDC106 PF15794.5 NODE_74474_length_212_cov_0.920904_g66533_i0forward_frame_3 - 9.4 5.9 9.8 10 5.7 9.8 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 YmzC PF14157.6 NODE_74473_length_212_cov_0.943503_g66532_i0reverse_frame_2 - 0.16 12.0 0.4 0.27 11.3 0.1 1.5 2 0 0 2 2 2 0 YmzC-like protein DUF2878 PF11086.8 NODE_74471_length_212_cov_0.954802_g66530_i0reverse_frame_2 - 0.031 14.5 0.2 0.036 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2878) Carb_kinase PF01256.17 NODE_74470_length_212_cov_0.960452_g66529_i0forward_frame_3 - 0.17 11.4 0.0 0.25 10.8 0.0 1.3 1 1 0 1 1 1 0 Carbohydrate kinase DUF5021 PF16424.5 NODE_74468_length_212_cov_0.977401_g66527_i0reverse_frame_2 - 0.14 11.9 0.1 0.16 11.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5021) Lactamase_B PF00753.27 NODE_74465_length_212_cov_1.022599_g66524_i0reverse_frame_2 - 2.7e-05 24.3 0.0 2.7e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 NODE_74465_length_212_cov_1.022599_g66524_i0reverse_frame_2 - 0.035 13.6 0.2 0.039 13.4 0.2 1.1 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Telomerase_RBD PF12009.8 NODE_74461_length_212_cov_1.056497_g66520_i0reverse_frame_2 - 0.05 13.7 1.0 0.056 13.6 1.0 1.1 1 0 0 1 1 1 0 Telomerase ribonucleoprotein complex - RNA binding domain Beta_helix PF13229.6 NODE_74461_length_212_cov_1.056497_g66520_i0forward_frame_2 - 0.0013 18.6 2.2 0.0016 18.3 2.2 1.2 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_74461_length_212_cov_1.056497_g66520_i0forward_frame_2 - 0.0081 15.4 0.7 0.0089 15.3 0.7 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) DUF3591 PF12157.8 NODE_74459_length_212_cov_1.084746_g66518_i0reverse_frame_2 - 0.051 12.2 0.0 0.051 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3591) Disintegrin PF00200.23 NODE_74456_length_212_cov_1.107345_g66515_i0forward_frame_2 - 0.42 11.4 5.1 0.16 12.8 2.7 1.5 1 1 1 2 2 2 0 Disintegrin IFN-gamma PF00714.17 NODE_74455_length_212_cov_1.107345_g66514_i0reverse_frame_2 - 0.0067 16.3 0.2 0.0073 16.2 0.2 1.0 1 0 0 1 1 1 1 Interferon gamma DEAD PF00270.29 NODE_74455_length_212_cov_1.107345_g66514_i0forward_frame_2 - 1.5e-06 28.1 0.0 3.2e-06 27.0 0.0 1.5 2 0 0 2 2 2 1 DEAD/DEAH box helicase CHZ PF09649.10 NODE_74451_length_212_cov_1.124294_g66510_i0reverse_frame_2 - 0.16 11.5 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Histone chaperone domain CHZ FHA PF00498.26 NODE_74450_length_212_cov_1.124294_g66509_i0reverse_frame_2 - 1.1e-09 38.5 0.0 1.2e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_74450_length_212_cov_1.124294_g66509_i0reverse_frame_2 - 0.00052 20.3 0.0 0.00055 20.2 0.0 1.0 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Skp1 PF01466.19 NODE_74450_length_212_cov_1.124294_g66509_i0reverse_frame_2 - 0.053 13.6 0.3 0.15 12.2 0.3 1.6 1 1 0 1 1 1 0 Skp1 family, dimerisation domain HNH PF01844.23 NODE_74449_length_212_cov_1.129944_g66508_i0forward_frame_3 - 0.045 13.9 0.2 0.054 13.7 0.2 1.2 1 0 0 1 1 1 0 HNH endonuclease BTB_2 PF02214.22 NODE_74445_length_212_cov_1.129944_g66504_i0reverse_frame_2 - 0.11 12.9 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 BTB/POZ domain Lamprin PF06403.11 NODE_74444_length_212_cov_1.129944_g66503_i0forward_frame_3 - 0.13 12.2 1.0 0.16 11.9 1.0 1.3 1 0 0 1 1 1 0 Lamprin Glyco_H_20C_C PF18088.1 NODE_74444_length_212_cov_1.129944_g66503_i0forward_frame_3 - 4.5 7.1 6.8 2.8 7.7 0.9 2.0 1 1 1 2 2 2 0 Glycoside Hydrolase 20C C-terminal domain TMEM154 PF15102.6 NODE_74441_length_212_cov_1.135593_g66500_i0forward_frame_3 - 0.24 11.3 0.5 0.27 11.1 0.5 1.0 1 0 0 1 1 1 0 TMEM154 protein family PHD_2 PF13831.6 NODE_74439_length_212_cov_1.146893_g66498_i0forward_frame_2 - 0.043 13.4 0.3 0.063 12.8 0.3 1.3 1 0 0 1 1 1 0 PHD-finger Rota_NS6 PF04866.12 NODE_74437_length_212_cov_1.152542_g66496_i0forward_frame_2 - 0.028 14.6 0.5 0.034 14.3 0.5 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 6 CaMBD PF02888.16 NODE_74436_length_212_cov_1.152542_g66495_i0reverse_frame_2 - 0.043 14.0 0.1 0.053 13.7 0.1 1.1 1 0 0 1 1 1 0 Calmodulin binding domain Herpes_UL20 PF04544.12 NODE_74433_length_212_cov_1.209040_g66492_i0forward_frame_3 - 0.06 13.7 0.3 0.066 13.6 0.3 1.0 1 0 0 1 1 1 0 Herpesvirus egress protein UL20 DUF249 PF03158.13 NODE_74431_length_212_cov_1.220339_g66490_i0reverse_frame_3 - 0.043 13.5 0.4 0.043 13.5 0.4 1.1 1 0 0 1 1 1 0 Multigene family 530 protein tRNA-Thr_ED PF08915.11 NODE_74430_length_212_cov_1.225989_g66489_i0forward_frame_3 - 0.15 12.1 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Archaea-specific editing domain of threonyl-tRNA synthetase HHV-1_VABD PF16852.5 NODE_74421_length_212_cov_1.327684_g66480_i0reverse_frame_3 - 0.051 13.6 1.6 0.075 13.0 1.6 1.3 1 0 0 1 1 1 0 Herpes viral adaptor-to-host cellular mRNA binding domain ComS PF17584.2 NODE_74419_length_212_cov_1.344633_g66478_i0forward_frame_2 - 0.26 10.8 1.8 0.43 10.1 1.8 1.4 1 0 0 1 1 1 0 Bacillus competence protein S TPR_4 PF07721.14 NODE_74416_length_212_cov_1.344633_g66475_i0forward_frame_2 - 0.04 14.6 0.5 0.11 13.2 0.2 1.9 1 1 0 1 1 1 0 Tetratricopeptide repeat Arteri_Gl PF00951.18 NODE_74414_length_212_cov_1.350282_g66473_i0reverse_frame_2 - 0.29 10.9 4.2 0.32 10.8 4.2 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DNA_pol3_finger PF17657.1 NODE_74414_length_212_cov_1.350282_g66473_i0forward_frame_2 - 2.2e-26 92.2 0.3 2.4e-26 92.1 0.3 1.0 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain 7TM_GPCR_Str PF10326.9 NODE_74406_length_212_cov_1.355932_g66465_i0reverse_frame_3 - 0.051 12.9 3.9 0.056 12.8 3.9 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Str TMEM18 PF14770.6 NODE_74405_length_212_cov_1.355932_g66464_i0reverse_frame_3 - 0.018 15.0 0.9 0.02 14.9 0.9 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 GED PF02212.18 NODE_74403_length_212_cov_1.355932_g66462_i0reverse_frame_2 - 0.033 14.3 0.5 0.04 14.1 0.5 1.0 1 0 0 1 1 1 0 Dynamin GTPase effector domain Gemini_mov PF01708.16 NODE_74403_length_212_cov_1.355932_g66462_i0forward_frame_2 - 0.17 11.7 1.0 0.23 11.2 1.0 1.4 1 1 0 1 1 1 0 Geminivirus putative movement protein DUF2207 PF09972.9 NODE_74403_length_212_cov_1.355932_g66462_i0forward_frame_2 - 4 6.1 5.8 4.3 6.0 5.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TSP_1 PF00090.19 NODE_74401_length_212_cov_1.355932_g66460_i0forward_frame_2 - 8.2e-05 22.8 1.6 0.00014 22.0 1.6 1.4 1 0 0 1 1 1 1 Thrombospondin type 1 domain USP8_interact PF08941.10 NODE_74397_length_212_cov_1.355932_g66456_i0forward_frame_3 - 0.18 11.6 2.5 0.18 11.6 2.5 1.0 1 0 0 1 1 1 0 USP8 interacting YabA PF06156.13 NODE_74397_length_212_cov_1.355932_g66456_i0forward_frame_3 - 0.91 10.2 7.0 1.1 10.0 7.0 1.1 1 0 0 1 1 1 0 Initiation control protein YabA UPF0242 PF06785.11 NODE_74397_length_212_cov_1.355932_g66456_i0forward_frame_3 - 1.9 8.5 11.8 2 8.5 11.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DivIC PF04977.15 NODE_74397_length_212_cov_1.355932_g66456_i0forward_frame_3 - 3.3 7.6 10.0 4.6 7.1 8.0 1.9 1 1 1 2 2 2 0 Septum formation initiator Kinesin PF00225.23 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 5.5e-21 74.8 1.6 5.9e-21 74.8 1.6 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 2.5e-14 53.5 0.1 2.8e-14 53.3 0.1 1.0 1 0 0 1 1 1 1 Microtubule binding AAA_30 PF13604.6 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.004 16.9 0.2 0.0049 16.6 0.2 1.0 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.0072 15.9 0.2 0.015 14.8 0.2 1.5 1 1 1 2 2 2 1 P-loop containing dynein motor region ATPase PF06745.13 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.054 12.8 0.1 0.059 12.7 0.1 1.1 1 0 0 1 1 1 0 KaiC ResIII PF04851.15 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.07 13.1 0.2 0.074 13.0 0.2 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit T2SSE PF00437.20 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.074 12.1 0.1 0.084 11.9 0.1 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_24 PF13479.6 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.097 12.4 0.2 0.12 12.0 0.2 1.2 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.13 11.3 0.2 0.15 11.2 0.2 1.0 1 0 0 1 1 1 0 PIF1-like helicase AAA_22 PF13401.6 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.14 12.4 0.1 0.19 12.0 0.1 1.2 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.15 11.8 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain PhoH PF02562.16 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.17 11.3 0.2 0.19 11.1 0.2 1.1 1 0 0 1 1 1 0 PhoH-like protein DUF5082 PF16888.5 NODE_74395_length_212_cov_1.389831_g66454_i0forward_frame_2 - 0.0041 17.4 2.8 0.0047 17.2 2.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) Mntp PF02659.15 NODE_74392_length_212_cov_1.418079_g66451_i0reverse_frame_2 - 3.5e-18 65.8 14.0 3.9e-18 65.7 14.0 1.0 1 0 0 1 1 1 1 Putative manganese efflux pump SfLAP PF11139.8 NODE_74392_length_212_cov_1.418079_g66451_i0reverse_frame_2 - 0.19 11.1 5.5 0.2 11.0 5.5 1.0 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein TcdA_TcdB_pore PF12920.7 NODE_74392_length_212_cov_1.418079_g66451_i0reverse_frame_2 - 1.7 6.8 4.3 2 6.6 4.3 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF5048 PF16467.5 NODE_74389_length_212_cov_1.423729_g66448_i0reverse_frame_3 - 0.072 13.4 0.2 0.19 12.0 0.1 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5048) SLC3A2_N PF16028.5 NODE_74385_length_212_cov_1.440678_g66444_i0forward_frame_3 - 0.08 12.5 0.5 0.12 11.9 0.5 1.2 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus ANAPC2 PF08672.11 NODE_74383_length_212_cov_1.446328_g66442_i0reverse_frame_3 - 0.041 14.4 0.5 0.062 13.8 0.5 1.3 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 DUF2797 PF10977.8 NODE_74379_length_212_cov_1.480226_g66438_i0forward_frame_2 - 1.1e-30 107.3 0.5 1.1e-30 107.2 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2797) Tmemb_9 PF05434.11 NODE_74375_length_212_cov_1.514124_g66434_i0forward_frame_2 - 0.074 12.9 0.1 0.078 12.9 0.1 1.0 1 0 0 1 1 1 0 TMEM9 TMEM192 PF14802.6 NODE_74374_length_212_cov_1.525424_g66433_i0reverse_frame_3 - 0.0047 16.1 0.4 0.005 16.0 0.4 1.1 1 0 0 1 1 1 1 TMEM192 family AAA_26 PF13500.6 NODE_74372_length_212_cov_1.531073_g66431_i0reverse_frame_2 - 0.096 12.5 0.1 0.11 12.4 0.1 1.0 1 0 0 1 1 1 0 AAA domain MucBP_2 PF17965.1 NODE_74369_length_212_cov_1.548023_g66428_i0forward_frame_3 - 0.34 11.5 6.2 1.9 9.1 6.2 1.9 1 1 0 1 1 1 0 Mucin binding domain Ion_trans PF00520.31 NODE_74368_length_212_cov_1.559322_g66427_i0forward_frame_2 - 0.55 9.4 1.9 0.68 9.1 1.9 1.1 1 0 0 1 1 1 0 Ion transport protein PET PF06297.14 NODE_74367_length_212_cov_1.564972_g66426_i0reverse_frame_2 - 0.049 13.9 0.0 0.054 13.8 0.0 1.1 1 0 0 1 1 1 0 PET Domain PRT_C PF08372.10 NODE_74367_length_212_cov_1.564972_g66426_i0forward_frame_3 - 0.31 10.8 1.7 0.35 10.6 1.7 1.1 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal InaF-motif PF15018.6 NODE_74367_length_212_cov_1.564972_g66426_i0forward_frame_2 - 0.3 11.0 0.3 0.3 11.0 0.3 2.4 2 1 0 2 2 2 0 TRP-interacting helix ComC PF03047.14 NODE_74366_length_212_cov_1.570621_g66425_i0forward_frame_3 - 0.1 12.4 1.1 0.19 11.5 1.1 1.4 1 0 0 1 1 1 0 COMC family NADH-G_4Fe-4S_3 PF10588.9 NODE_74363_length_212_cov_1.576271_g66422_i0reverse_frame_3 - 0.004 16.7 0.4 0.0058 16.2 0.4 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RIFIN PF02009.16 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 8.3e-05 22.6 0.2 8.3e-05 22.6 0.2 1.0 1 0 0 1 1 1 1 Rifin TMEM154 PF15102.6 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.015 15.2 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 TMEM154 protein family EssA PF10661.9 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.016 15.0 0.3 0.017 14.9 0.3 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA ECSCR PF15820.5 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.022 14.6 0.7 0.024 14.4 0.7 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Amnionless PF14828.6 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.059 12.2 0.2 0.061 12.2 0.2 1.0 1 0 0 1 1 1 0 Amnionless VSP PF03302.13 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.1 11.4 0.5 0.1 11.4 0.5 1.0 1 0 0 1 1 1 0 Giardia variant-specific surface protein ASFV_J13L PF05568.11 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.19 11.5 0.4 0.2 11.4 0.4 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Stevor PF17410.2 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.25 10.9 0.5 0.28 10.7 0.5 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Alpha_E1_glycop PF01589.16 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.78 8.3 2.8 0.85 8.2 2.8 1.0 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein Peptidase_S74 PF13884.6 NODE_74355_length_212_cov_1.581921_g66414_i0reverse_frame_3 - 0.039 14.3 0.9 0.072 13.4 0.9 1.5 1 0 0 1 1 1 0 Chaperone of endosialidase Phosphodiest PF01663.22 NODE_74355_length_212_cov_1.581921_g66414_i0forward_frame_2 - 0.046 13.3 0.2 0.051 13.2 0.2 1.0 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase Ni_hydr_CYTB PF01292.20 NODE_74349_length_212_cov_1.632768_g66408_i0forward_frame_3 - 0.00038 20.1 0.4 0.00041 20.0 0.4 1.0 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 TT_ORF1 PF02956.14 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_3 - 4.1 6.0 14.8 4.1 6.0 14.8 1.0 1 0 0 1 1 1 0 TT viral orf 1 Rrn6 PF10214.9 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_3 - 6.4 5.1 7.3 7.5 4.9 7.3 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor U1snRNP70_N PF12220.8 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_2 - 0.017 15.8 0.7 0.019 15.6 0.7 1.1 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal AP3D1 PF06375.11 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_2 - 0.032 14.5 4.3 0.029 14.6 4.3 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Protocadherin PF08374.11 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_2 - 0.1 12.6 1.3 0.11 12.5 1.3 1.0 1 0 0 1 1 1 0 Protocadherin DUF4013 PF13197.6 NODE_74347_length_212_cov_1.655367_g66406_i0forward_frame_2 - 0.0049 16.7 0.3 0.0055 16.6 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4013) Alpha_kinase PF02816.18 NODE_74345_length_212_cov_1.666667_g66404_i0forward_frame_2 - 0.12 12.5 0.3 0.14 12.2 0.3 1.1 1 0 0 1 1 1 0 Alpha-kinase family HisKA PF00512.25 NODE_74340_length_212_cov_1.711864_g66399_i0forward_frame_3 - 1.1e-05 25.4 0.0 1.4e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain FliE PF02049.18 NODE_74335_length_212_cov_1.757062_g66394_i0reverse_frame_3 - 0.033 14.3 0.4 0.12 12.5 0.2 1.8 1 1 1 2 2 2 0 Flagellar hook-basal body complex protein FliE DNA_pol_viral_N PF00242.17 NODE_74335_length_212_cov_1.757062_g66394_i0forward_frame_2 - 0.24 10.9 4.6 0.23 10.9 4.6 1.0 1 0 0 1 1 1 0 DNA polymerase (viral) N-terminal domain BCCT PF02028.17 NODE_74334_length_212_cov_1.768362_g66393_i0forward_frame_2 - 4.1e-30 104.7 1.4 4.4e-30 104.6 1.4 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter PAP2 PF01569.21 NODE_74334_length_212_cov_1.768362_g66393_i0forward_frame_2 - 0.061 13.1 0.3 0.067 12.9 0.3 1.1 1 0 0 1 1 1 0 PAP2 superfamily DsbB PF02600.16 NODE_74333_length_212_cov_1.768362_g66392_i0forward_frame_3 - 1.1e-09 38.9 3.2 1.2e-09 38.8 3.2 1.0 1 0 0 1 1 1 1 Disulfide bond formation protein DsbB HEAT PF02985.22 NODE_74333_length_212_cov_1.768362_g66392_i0forward_frame_2 - 0.11 12.8 0.5 20 5.8 0.0 2.2 2 0 0 2 2 2 0 HEAT repeat Lamprin PF06403.11 NODE_74329_length_212_cov_1.785311_g66388_i0forward_frame_2 - 0.035 14.1 0.1 0.042 13.8 0.1 1.2 1 0 0 1 1 1 0 Lamprin XRCC4 PF06632.12 NODE_74328_length_212_cov_1.785311_g66387_i0forward_frame_3 - 0.037 12.9 6.2 0.039 12.8 6.2 1.0 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 DUF1682 PF07946.14 NODE_74328_length_212_cov_1.785311_g66387_i0forward_frame_3 - 1.1 8.4 10.0 1.1 8.4 10.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Med19 PF10278.9 NODE_74328_length_212_cov_1.785311_g66387_i0forward_frame_3 - 2.3 8.1 11.1 2.5 8.0 11.1 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Presenilin PF01080.17 NODE_74328_length_212_cov_1.785311_g66387_i0forward_frame_3 - 7.3 5.2 5.1 7.4 5.2 5.1 1.0 1 0 0 1 1 1 0 Presenilin CST-I PF06002.12 NODE_74327_length_212_cov_1.785311_g66386_i0reverse_frame_3 - 0.033 13.9 1.3 0.035 13.9 1.3 1.0 1 0 0 1 1 1 0 Alpha-2,3-sialyltransferase (CST-I) GHL6 PF14871.6 NODE_74327_length_212_cov_1.785311_g66386_i0reverse_frame_3 - 0.054 13.6 0.1 0.057 13.6 0.1 1.1 1 0 0 1 1 1 0 Hypothetical glycosyl hydrolase 6 partial_CstF PF15861.5 NODE_74325_length_212_cov_1.802260_g66384_i0forward_frame_3 - 0.052 13.3 0.1 0.085 12.7 0.1 1.5 1 1 0 1 1 1 0 Partial cleavage stimulation factor domain DUF4922 PF16269.5 NODE_74325_length_212_cov_1.802260_g66384_i0forward_frame_2 - 0.09 12.5 0.3 0.29 10.9 0.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4922) DUF4905 PF16248.5 NODE_74325_length_212_cov_1.802260_g66384_i0forward_frame_2 - 0.14 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4905) DUF1477 PF07346.11 NODE_74321_length_212_cov_1.807910_g66380_i0forward_frame_3 - 0.34 11.2 3.5 0.35 11.1 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1477) Na_H_Exchanger PF00999.21 NODE_74316_length_212_cov_1.836158_g66375_i0reverse_frame_3 - 3.3e-05 22.9 0.4 3.6e-05 22.8 0.4 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CAAD PF14159.6 NODE_74316_length_212_cov_1.836158_g66375_i0reverse_frame_3 - 0.03 14.2 0.0 0.046 13.6 0.0 1.4 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase PCYCGC PF13798.6 NODE_74313_length_212_cov_1.881356_g66372_i0reverse_frame_3 - 0.075 12.9 1.4 0.087 12.7 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function with PCYCGC motif TRAM1 PF08390.11 NODE_74311_length_212_cov_1.898305_g66370_i0forward_frame_2 - 0.21 11.3 2.0 0.28 10.9 1.3 1.7 1 1 0 1 1 1 0 TRAM1-like protein DUF1700 PF08006.11 NODE_74311_length_212_cov_1.898305_g66370_i0forward_frame_2 - 7 6.1 11.8 8 6.0 11.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Man-6-P_recep PF02157.15 NODE_74310_length_212_cov_1.903955_g66369_i0reverse_frame_2 - 0.32 10.1 1.9 0.35 9.9 1.9 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate receptor NPV_P10 PF05531.12 NODE_74306_length_212_cov_1.960452_g66365_i0reverse_frame_3 - 0.024 15.1 0.1 0.034 14.6 0.1 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF1409 PF07197.12 NODE_74306_length_212_cov_1.960452_g66365_i0reverse_frame_3 - 0.085 12.7 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1409) DUF1664 PF07889.12 NODE_74306_length_212_cov_1.960452_g66365_i0reverse_frame_3 - 0.095 12.7 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4070 PF13282.6 NODE_74304_length_212_cov_1.988701_g66363_i0forward_frame_2 - 0.025 14.7 0.1 0.027 14.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) ELF PF03317.13 NODE_74302_length_212_cov_2.005650_g66361_i0forward_frame_2 - 0.083 12.9 0.0 0.09 12.8 0.0 1.1 1 0 0 1 1 1 0 ELF protein RAI16-like PF10257.9 NODE_74300_length_212_cov_2.028249_g66359_i0reverse_frame_2 - 0.00044 19.2 0.0 0.00047 19.1 0.0 1.0 1 0 0 1 1 1 1 Retinoic acid induced 16-like protein SpvD PF05563.12 NODE_74298_length_212_cov_2.028249_g66357_i0reverse_frame_3 - 0.17 11.5 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Salmonella plasmid virulence protein SpvD Met_10 PF02475.16 NODE_74296_length_212_cov_2.062147_g66355_i0reverse_frame_2 - 0.094 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein DUF4418 PF14387.6 NODE_74295_length_212_cov_2.073446_g66354_i0reverse_frame_3 - 0.0031 17.7 0.3 0.0035 17.5 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4418) PDR_CDR PF06422.12 NODE_74285_length_212_cov_2.175141_g66344_i0reverse_frame_2 - 0.064 13.2 0.0 0.064 13.2 0.0 1.1 1 0 0 1 1 1 0 CDR ABC transporter Ski_Sno PF02437.17 NODE_74284_length_212_cov_2.180791_g66343_i0forward_frame_3 - 0.15 11.8 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 SKI/SNO/DAC family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks351.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks351.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks351.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks351.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ras PF00071.22 NODE_74283_length_212_cov_2.197740_g66342_i0forward_frame_3 - 2.3e-08 33.8 0.0 2.3e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 Ras family HrpF PF06266.12 NODE_74283_length_212_cov_2.197740_g66342_i0forward_frame_3 - 0.066 13.5 0.1 0.077 13.3 0.1 1.1 1 0 0 1 1 1 0 HrpF protein DUF1556 PF07590.11 NODE_74279_length_212_cov_2.248588_g66338_i0forward_frame_2 - 0.072 13.4 0.0 0.084 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1556) ZnuA PF01297.17 NODE_74278_length_212_cov_2.254237_g66337_i0forward_frame_3 - 1.3e-11 44.4 0.0 1.3e-11 44.4 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Erf4 PF10256.9 NODE_74275_length_212_cov_2.322034_g66334_i0forward_frame_3 - 0.056 13.6 0.3 0.06 13.5 0.3 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family VPS9 PF02204.18 NODE_74274_length_212_cov_2.338983_g66333_i0reverse_frame_2 - 6e-07 29.6 0.0 8.1e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain DASH_Spc19 PF08287.11 NODE_74270_length_212_cov_2.463277_g66329_i0forward_frame_3 - 0.11 12.3 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Spc19 UPF0184 PF03670.13 NODE_74268_length_212_cov_2.485876_g66327_i0reverse_frame_3 - 0.027 14.8 1.7 0.032 14.6 1.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0184) DUF3573 PF12097.8 NODE_74268_length_212_cov_2.485876_g66327_i0reverse_frame_3 - 0.21 10.4 0.6 0.21 10.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) Peptidase_C2 PF00648.21 NODE_74262_length_212_cov_2.548023_g66321_i0forward_frame_2 - 2.1e-07 30.2 0.0 2.2e-07 30.2 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease RNase_H PF00075.24 NODE_74262_length_212_cov_2.548023_g66321_i0forward_frame_2 - 0.16 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 RNase H DUF1363 PF07101.11 NODE_74254_length_212_cov_2.757062_g66313_i0reverse_frame_3 - 0.12 12.6 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1363) Fer4_2 PF12797.7 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.00047 20.1 1.9 0.00081 19.4 1.9 1.4 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4 PF00037.27 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.00068 19.3 2.0 0.001 18.8 2.0 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_21 PF14697.6 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.0029 17.7 0.8 0.0036 17.4 0.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.0062 16.7 0.3 0.0064 16.6 0.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.0074 16.8 1.0 0.01 16.3 0.3 1.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_10 PF13237.6 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.0077 16.3 0.9 0.011 15.8 0.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.075 13.6 4.4 0.21 12.2 4.5 1.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.084 13.3 3.6 0.16 12.4 3.9 1.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain MAPKK1_Int PF08923.10 NODE_74250_length_212_cov_2.813559_g66309_i0forward_frame_3 - 0.049 13.4 0.1 0.062 13.1 0.1 1.0 1 0 0 1 1 1 0 Mitogen-activated protein kinase kinase 1 interacting Lamprin PF06403.11 NODE_74247_length_212_cov_2.898305_g66306_i0forward_frame_2 - 0.0067 16.4 1.2 0.0074 16.3 1.2 1.1 1 0 0 1 1 1 1 Lamprin BPD_transp_1 PF00528.22 NODE_74239_length_212_cov_3.248588_g66298_i0forward_frame_3 - 1.3e-12 47.8 0.1 1.4e-12 47.8 0.1 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Na_H_antiport_1 PF06965.12 NODE_74237_length_212_cov_3.344633_g66296_i0forward_frame_2 - 7.6e-23 81.0 8.6 8.2e-23 80.9 8.6 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 Pro_CA PF00484.19 NODE_74232_length_212_cov_4.096045_g66291_i0reverse_frame_3 - 1.4e-05 25.4 0.0 1.5e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase Dicty_CAD PF05720.12 NODE_74232_length_212_cov_4.096045_g66291_i0reverse_frame_3 - 0.095 12.7 0.0 0.14 12.2 0.0 1.3 1 1 0 1 1 1 0 Cell-cell adhesion domain DUF16 PF01519.16 NODE_74231_length_212_cov_4.129944_g66290_i0forward_frame_2 - 0.018 15.5 0.1 0.02 15.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 DUF4303 PF14136.6 NODE_74231_length_212_cov_4.129944_g66290_i0forward_frame_2 - 0.097 12.4 0.0 0.099 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) zf-Sec23_Sec24 PF04810.15 NODE_74230_length_212_cov_4.186441_g66289_i0reverse_frame_3 - 0.0028 17.7 2.6 0.29 11.2 0.2 2.5 2 1 0 2 2 2 2 Sec23/Sec24 zinc finger DC_STAMP PF07782.13 NODE_74224_length_212_cov_17.237288_g66283_i0reverse_frame_2 - 0.39 10.5 7.7 0.44 10.3 7.7 1.2 1 0 0 1 1 1 0 DC-STAMP-like protein stn_TNFRSF12A PF12191.8 NODE_74221_length_212_cov_29.322034_g66280_i0reverse_frame_2 - 0.048 13.9 0.1 0.058 13.6 0.1 1.1 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain LSR PF05624.14 NODE_74217_length_212_cov_33.180791_g66276_i0reverse_frame_3 - 3.9 7.5 5.8 0.75 9.8 0.6 2.0 1 1 1 2 2 2 0 Lipolysis stimulated receptor (LSR) DUF3682 PF12446.8 NODE_74214_length_212_cov_37.096045_g66273_i0reverse_frame_3 - 0.084 13.4 0.1 0.09 13.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3682) Band_7_1 PF13421.6 NODE_74212_length_212_cov_38.203390_g66271_i0forward_frame_2 - 0.14 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 SPFH domain-Band 7 family DUF4719 PF15843.5 NODE_74211_length_212_cov_38.384181_g66270_i0reverse_frame_3 - 1.8 8.6 5.5 2.1 8.4 5.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) Zip PF02535.22 NODE_74209_length_212_cov_39.395480_g66268_i0reverse_frame_2 - 0.57 9.4 3.5 0.64 9.2 3.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter MRP_L53 PF10780.9 NODE_74206_length_212_cov_44.338983_g66265_i0forward_frame_3 - 0.016 15.4 0.1 0.022 14.9 0.1 1.2 1 0 0 1 1 1 0 39S ribosomal protein L53/MRP-L53 AAA_2 PF07724.14 NODE_74204_length_212_cov_46.683616_g66263_i0reverse_frame_3 - 0.03 14.4 0.1 0.031 14.4 0.1 1.1 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) DUF3931 PF13082.6 NODE_74201_length_212_cov_47.971751_g66260_i0reverse_frame_3 - 0.51 10.5 6.5 1.1 9.4 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3931) Cu2_monooxygen PF01082.20 NODE_74197_length_212_cov_51.514124_g66256_i0forward_frame_2 - 0.024 14.9 0.0 0.026 14.8 0.0 1.0 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain LHC PF00556.20 NODE_74197_length_212_cov_51.514124_g66256_i0forward_frame_2 - 0.17 12.1 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Antenna complex alpha/beta subunit ATS3 PF06232.11 NODE_74196_length_212_cov_51.790960_g66255_i0forward_frame_2 - 0.16 11.9 0.0 0.19 11.7 0.0 1.0 1 0 0 1 1 1 0 Embryo-specific protein 3, (ATS3) DUF1242 PF06842.12 NODE_74190_length_212_cov_58.519774_g66249_i0forward_frame_2 - 0.026 14.3 1.7 0.045 13.5 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1242) CAP_N PF01213.19 NODE_74176_length_212_cov_87.858757_g66235_i0reverse_frame_2 - 1.9 7.9 12.7 2.1 7.8 12.7 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_74176_length_212_cov_87.858757_g66235_i0reverse_frame_2 - 5.5 7.0 8.3 6.1 6.9 8.3 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator DUF2433 PF10360.9 NODE_74173_length_212_cov_105.892655_g66232_i0forward_frame_3 - 0.017 15.2 0.1 0.022 14.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) Cytochrom_NNT PF03264.14 NODE_74161_length_212_cov_167.039548_g66220_i0reverse_frame_2 - 0.019 14.7 2.1 0.02 14.6 2.1 1.1 1 0 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region YIEGIA PF14045.6 NODE_74157_length_212_cov_208.271186_g66216_i0reverse_frame_2 - 0.089 11.6 0.0 0.093 11.6 0.0 1.0 1 0 0 1 1 1 0 YIEGIA protein Paired_CXXCH_1 PF09699.10 NODE_74156_length_212_cov_232.593220_g66215_i0forward_frame_2 - 0.013 15.2 0.7 0.13 12.0 0.0 2.2 1 1 1 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) VHP PF02209.19 NODE_74156_length_212_cov_232.593220_g66215_i0forward_frame_2 - 0.26 11.4 7.2 0.43 10.7 7.2 1.3 1 0 0 1 1 1 0 Villin headpiece domain PCP PF02429.15 NODE_74150_length_212_cov_7367.056497_g66209_i0forward_frame_3 - 2.7e-23 82.9 2.1 2.9e-23 82.8 2.1 1.0 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein ADH_N_2 PF16884.5 NODE_74145_length_213_cov_0.893258_g66204_i0reverse_frame_2 - 0.21 11.5 0.0 0.29 11.1 0.0 1.1 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase DUF4186 PF13811.6 NODE_74145_length_213_cov_0.893258_g66204_i0forward_frame_2 - 0.22 11.6 2.5 0.28 11.2 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) mTERF PF02536.14 NODE_74144_length_213_cov_0.893258_g66203_i0forward_frame_3 - 0.016 14.2 0.1 0.017 14.1 0.1 1.0 1 0 0 1 1 1 0 mTERF FerI PF08151.12 NODE_74143_length_213_cov_0.893258_g66202_i0forward_frame_3 - 0.16 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 FerI (NUC094) domain Lamprin PF06403.11 NODE_74142_length_213_cov_0.893258_g66201_i0forward_frame_2 - 0.058 13.4 0.0 0.065 13.2 0.0 1.1 1 0 0 1 1 1 0 Lamprin DUF2835 PF11197.8 NODE_74138_length_213_cov_0.898876_g66197_i0forward_frame_2 - 0.052 13.4 0.1 0.079 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2835) DUF5533 PF17685.1 NODE_74136_length_213_cov_0.898876_g66195_i0reverse_frame_3 - 0.0028 18.1 3.9 0.003 18.0 3.9 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5533) DUF4287 PF14117.6 NODE_74134_length_213_cov_0.898876_g66193_i0forward_frame_3 - 0.079 13.1 0.0 0.13 12.5 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4287) DUF3896 PF13035.6 NODE_74129_length_213_cov_0.898876_g66188_i0forward_frame_3 - 0.017 15.3 0.4 0.024 14.8 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3896) RrnaAD PF00398.20 NODE_74123_length_213_cov_0.898876_g66182_i0forward_frame_2 - 0.15 11.1 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Hep_core_N PF08290.11 NODE_74115_length_213_cov_0.994382_g66174_i0forward_frame_2 - 8 6.6 8.3 20 5.3 0.9 2.4 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger Vpu PF00558.19 NODE_74113_length_213_cov_1.022472_g66172_i0forward_frame_3 - 0.035 13.9 0.1 0.047 13.5 0.1 1.2 1 0 0 1 1 1 0 Vpu protein RAMP4 PF06624.12 NODE_74112_length_213_cov_1.028090_g66171_i0forward_frame_3 - 4.9 7.3 6.3 32 4.7 6.3 2.0 1 1 0 1 1 1 0 Ribosome associated membrane protein RAMP4 LRR_1 PF00560.33 NODE_74111_length_213_cov_1.073034_g66170_i0forward_frame_2 - 0.0054 17.1 0.3 0.22 12.2 0.0 2.4 2 1 0 2 2 2 1 Leucine Rich Repeat LRR_6 PF13516.6 NODE_74111_length_213_cov_1.073034_g66170_i0forward_frame_2 - 0.0074 16.3 0.1 0.086 12.9 0.0 2.2 2 0 0 2 2 2 1 Leucine Rich repeat LRR_4 PF12799.7 NODE_74111_length_213_cov_1.073034_g66170_i0forward_frame_2 - 0.065 13.7 1.0 0.22 12.0 1.0 1.9 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) Herpes_LAMP2 PF06126.11 NODE_74104_length_213_cov_1.112360_g66163_i0forward_frame_3 - 0.27 9.8 3.3 0.31 9.6 3.3 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 Phage_BR0599 PF09356.10 NODE_74103_length_213_cov_1.112360_g66162_i0reverse_frame_3 - 0.055 13.8 0.0 0.066 13.6 0.0 1.1 1 0 0 1 1 1 0 Phage conserved hypothetical protein BR0599 Per1 PF04080.13 NODE_74101_length_213_cov_1.117978_g66160_i0reverse_frame_3 - 0.059 13.1 0.5 0.064 13.0 0.5 1.0 1 0 0 1 1 1 0 Per1-like family PapG_N PF03627.13 NODE_74100_length_213_cov_1.117978_g66159_i0reverse_frame_2 - 0.035 13.8 0.0 0.039 13.6 0.0 1.0 1 0 0 1 1 1 0 PapG carbohydrate binding domain PRMT5_C PF17286.2 NODE_74100_length_213_cov_1.117978_g66159_i0forward_frame_2 - 0.021 14.7 0.2 0.021 14.7 0.2 1.1 1 0 0 1 1 1 0 PRMT5 oligomerisation domain VKG_Carbox PF05090.14 NODE_74100_length_213_cov_1.117978_g66159_i0forward_frame_2 - 0.064 12.1 0.1 0.064 12.1 0.1 1.0 1 0 0 1 1 1 0 Vitamin K-dependent gamma-carboxylase HTH_38 PF13936.6 NODE_74095_length_213_cov_1.123596_g66154_i0reverse_frame_2 - 0.16 11.8 0.1 0.23 11.2 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1455 PF07306.11 NODE_74090_length_213_cov_1.162921_g66149_i0reverse_frame_3 - 0.08 12.9 0.0 0.092 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1455) EPO_TPO PF00758.18 NODE_74089_length_213_cov_1.162921_g66148_i0reverse_frame_3 - 0.11 12.5 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Erythropoietin/thrombopoietin Ntox16 PF15523.6 NODE_74087_length_213_cov_1.174157_g66146_i0reverse_frame_3 - 0.091 13.0 3.1 0.12 12.6 3.1 1.1 1 0 0 1 1 1 0 Novel toxin 16 Flu_PB1 PF00602.17 NODE_74085_length_213_cov_1.202247_g66144_i0forward_frame_3 - 0.22 9.6 0.0 0.22 9.6 0.0 1.1 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PB1 DUF2670 PF10875.8 NODE_74081_length_213_cov_1.230337_g66140_i0forward_frame_2 - 0.029 14.5 0.2 0.034 14.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) PAC1 PF16094.5 NODE_74075_length_213_cov_1.275281_g66134_i0forward_frame_3 - 0.067 12.4 1.1 0.074 12.2 1.1 1.1 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 tRNA-synt_1c PF00749.21 NODE_74070_length_213_cov_1.292135_g66129_i0forward_frame_2 - 0.049 12.5 0.3 0.052 12.4 0.3 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain PAP_PilO PF06864.12 NODE_74070_length_213_cov_1.292135_g66129_i0forward_frame_2 - 0.065 12.1 0.0 0.065 12.1 0.0 1.0 1 0 0 1 1 1 0 Pilin accessory protein (PilO) COX4 PF02936.14 NODE_74067_length_213_cov_1.303371_g66126_i0reverse_frame_2 - 0.039 14.0 0.0 0.048 13.7 0.0 1.0 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV TMIE PF16038.5 NODE_74060_length_213_cov_1.337079_g66119_i0reverse_frame_3 - 0.26 11.2 0.6 0.34 10.8 0.6 1.1 1 0 0 1 1 1 0 TMIE protein Sensor_TM1 PF13755.6 NODE_74059_length_213_cov_1.337079_g66118_i0reverse_frame_3 - 0.018 14.7 0.4 0.026 14.3 0.4 1.2 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain Keratin_matx PF04579.12 NODE_74058_length_213_cov_1.342697_g66117_i0reverse_frame_2 - 0.024 15.0 2.7 0.025 14.9 2.7 1.1 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein 2H-phosphodiest PF08975.10 NODE_74058_length_213_cov_1.342697_g66117_i0forward_frame_2 - 0.049 13.6 0.0 0.078 13.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1868) PIP49_C PF12260.8 NODE_74054_length_213_cov_1.342697_g66113_i0forward_frame_2 - 0.16 11.5 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 O_Spanin_T7 PF17531.2 NODE_74053_length_213_cov_1.342697_g66112_i0reverse_frame_2 - 0.009 16.0 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 1 outer-membrane spanin sub-unit Flg_hook PF02120.16 NODE_74051_length_213_cov_1.348315_g66110_i0reverse_frame_3 - 0.046 13.6 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK ParB_C PF18064.1 NODE_74051_length_213_cov_1.348315_g66110_i0reverse_frame_2 - 0.18 12.0 3.0 0.45 10.7 0.0 2.1 2 0 0 2 2 2 0 Centromere-binding protein ParB C-terminal DUF3188 PF11384.8 NODE_74051_length_213_cov_1.348315_g66110_i0forward_frame_3 - 0.29 10.9 2.8 2.9 7.7 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3188) DUF4131 PF13567.6 NODE_74051_length_213_cov_1.348315_g66110_i0forward_frame_3 - 2.4 7.8 4.5 2.8 7.6 4.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) HTH_Tnp_Tc3_1 PF11427.8 NODE_74050_length_213_cov_1.348315_g66109_i0reverse_frame_2 - 0.029 14.2 0.1 0.038 13.9 0.1 1.2 1 0 0 1 1 1 0 Tc3 transposase zf-C2H2_jaz PF12171.8 NODE_74050_length_213_cov_1.348315_g66109_i0reverse_frame_2 - 0.12 12.7 0.8 0.2 12.0 0.8 1.4 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding GNVR PF13807.6 NODE_74045_length_213_cov_1.348315_g66104_i0reverse_frame_3 - 0.15 12.0 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 G-rich domain on putative tyrosine kinase Orf78 PF06024.12 NODE_74042_length_213_cov_1.348315_g66101_i0reverse_frame_3 - 0.052 13.9 1.2 0.053 13.8 1.2 1.2 1 0 0 1 1 1 0 Orf78 (ac78) Clathrin_H_link PF13838.6 NODE_74040_length_213_cov_1.348315_g66099_i0reverse_frame_3 - 0.068 13.1 0.0 0.092 12.7 0.0 1.2 1 0 0 1 1 1 0 Clathrin-H-link DUF2844 PF11005.8 NODE_74040_length_213_cov_1.348315_g66099_i0reverse_frame_3 - 0.24 11.4 0.0 0.32 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2844) CaATP_NAI PF12515.8 NODE_74034_length_213_cov_1.359551_g66093_i0forward_frame_2 - 0.27 10.9 1.7 9 6.0 0.1 2.2 2 0 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain Carla_C4 PF01623.17 NODE_74032_length_213_cov_1.370787_g66091_i0reverse_frame_2 - 0.013 15.4 0.1 0.016 15.2 0.1 1.1 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein Defensin_5 PF18251.1 NODE_74023_length_213_cov_1.404494_g66082_i0forward_frame_2 - 0.23 11.6 4.8 0.34 11.0 4.8 1.2 1 0 0 1 1 1 0 Fungal defensin Copsin Glyco_hydro_10 PF00331.20 NODE_74020_length_213_cov_1.415730_g66079_i0reverse_frame_3 - 0.029 13.5 0.9 0.03 13.5 0.9 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 10 Prok-RING_1 PF14446.6 NODE_74016_length_213_cov_1.438202_g66075_i0forward_frame_3 - 2.5 8.1 9.1 0.19 11.7 2.9 2.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 RVT_1 PF00078.27 NODE_74016_length_213_cov_1.438202_g66075_i0forward_frame_2 - 0.032 13.7 0.0 0.035 13.6 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) DUF3254 PF11630.8 NODE_74012_length_213_cov_1.466292_g66071_i0forward_frame_2 - 0.0071 16.5 0.1 0.01 16.0 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3254) XOO_2897-deam PF14440.6 NODE_74007_length_213_cov_1.494382_g66066_i0reverse_frame_3 - 0.075 13.1 1.0 0.085 13.0 1.0 1.2 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase DUF2847 PF11009.8 NODE_74001_length_213_cov_1.528090_g66060_i0reverse_frame_2 - 0.17 11.8 0.1 0.17 11.8 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2847) DUF3093 PF11292.8 NODE_74001_length_213_cov_1.528090_g66060_i0forward_frame_3 - 1.4 9.2 6.0 1.5 9.1 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3093) TTc_toxin_rep PF18807.1 NODE_74001_length_213_cov_1.528090_g66060_i0forward_frame_2 - 0.079 12.8 0.1 0.14 12.0 0.1 1.5 1 0 0 1 1 1 0 Tripartite Tc toxins repeat Peptidase_S13 PF02113.15 NODE_74000_length_213_cov_1.528090_g66059_i0forward_frame_2 - 4.1e-07 29.1 0.2 4.4e-07 29.0 0.2 1.0 1 0 0 1 1 1 1 D-Ala-D-Ala carboxypeptidase 3 (S13) family DUF5547 PF17701.1 NODE_73993_length_213_cov_1.561798_g66052_i0reverse_frame_2 - 0.075 12.9 0.0 0.079 12.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Frizzled PF01534.17 NODE_73993_length_213_cov_1.561798_g66052_i0forward_frame_3 - 0.042 12.9 1.2 0.04 13.0 1.2 1.1 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region p450 PF00067.22 NODE_73990_length_213_cov_1.561798_g66049_i0reverse_frame_3 - 5.8e-06 25.3 0.0 5.8e-06 25.3 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 KRTDAP PF15200.6 NODE_73990_length_213_cov_1.561798_g66049_i0forward_frame_2 - 0.0063 16.3 2.4 0.0077 16.0 2.4 1.2 1 0 0 1 1 1 1 Keratinocyte differentiation-associated Pertactin PF03212.14 NODE_73988_length_213_cov_1.573034_g66047_i0forward_frame_2 - 2e-13 50.4 0.7 2.5e-13 50.0 0.2 1.4 2 0 0 2 2 2 1 Pertactin Aerolysin PF01117.20 NODE_73986_length_213_cov_1.573034_g66045_i0reverse_frame_3 - 0.017 14.4 0.7 0.017 14.4 0.7 1.0 1 0 0 1 1 1 0 Aerolysin toxin Ribosomal_L50 PF10501.9 NODE_73986_length_213_cov_1.573034_g66045_i0reverse_frame_3 - 0.033 14.3 1.3 0.04 14.1 0.5 1.4 1 1 1 2 2 2 0 Ribosomal subunit 39S Gram_pos_anchor PF00746.21 NODE_73985_length_213_cov_1.573034_g66044_i0reverse_frame_3 - 0.099 12.6 0.3 0.16 12.0 0.3 1.3 1 0 0 1 1 1 0 LPXTG cell wall anchor motif BaffR-Tall_bind PF09256.10 NODE_73982_length_213_cov_1.589888_g66041_i0forward_frame_2 - 0.11 12.3 1.0 0.15 11.8 1.0 1.2 1 0 0 1 1 1 0 BAFF-R, TALL-1 binding RNA12 PF10443.9 NODE_73976_length_213_cov_1.651685_g66035_i0reverse_frame_3 - 0.2 10.3 0.0 0.2 10.3 0.0 1.0 1 0 0 1 1 1 0 RNA12 protein Adeno_E4 PF05385.11 NODE_73975_length_213_cov_1.662921_g66034_i0reverse_frame_3 - 0.086 12.9 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein zinc_ribbon_5 PF13719.6 NODE_73972_length_213_cov_1.679775_g66031_i0reverse_frame_2 - 0.04 13.7 1.7 0.058 13.2 1.7 1.2 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_12 PF11331.8 NODE_73972_length_213_cov_1.679775_g66031_i0reverse_frame_2 - 0.082 12.7 3.0 0.24 11.2 1.2 2.0 2 0 0 2 2 2 0 Probable zinc-ribbon domain Rubredoxin_2 PF18073.1 NODE_73972_length_213_cov_1.679775_g66031_i0forward_frame_2 - 0.13 12.0 5.1 3.7 7.4 5.1 2.2 1 1 0 1 1 1 0 Rubredoxin metal binding domain PI3Ka PF00613.20 NODE_73971_length_213_cov_1.685393_g66030_i0reverse_frame_3 - 8.2e-10 38.4 0.3 8.2e-10 38.4 0.3 1.0 1 0 0 1 1 1 1 Phosphoinositide 3-kinase family, accessory domain (PIK domain) ASFV_J13L PF05568.11 NODE_73967_length_213_cov_1.719101_g66026_i0forward_frame_3 - 0.26 11.0 0.6 0.21 11.3 0.6 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein DUF2162 PF09930.9 NODE_73964_length_213_cov_1.730337_g66023_i0forward_frame_2 - 0.041 13.3 0.8 0.047 13.1 0.8 1.0 1 0 0 1 1 1 0 Predicted transporter (DUF2162) YlbE PF14003.6 NODE_73959_length_213_cov_1.775281_g66018_i0reverse_frame_2 - 6 7.4 8.0 17 5.9 2.4 2.1 1 1 1 2 2 2 0 YlbE-like protein S1FA PF04689.13 NODE_73959_length_213_cov_1.775281_g66018_i0forward_frame_2 - 0.34 11.1 1.2 0.35 11.0 0.1 1.5 1 1 1 2 2 2 0 DNA binding protein S1FA EAP30 PF04157.16 NODE_73958_length_213_cov_1.780899_g66017_i0forward_frame_3 - 1.3e-05 24.6 0.0 1.6e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 EAP30/Vps36 family DUF3788 PF12663.7 NODE_73958_length_213_cov_1.780899_g66017_i0forward_frame_3 - 0.027 14.4 0.4 0.034 14.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3788) NodZ PF05830.11 NODE_73954_length_213_cov_1.792135_g66013_i0forward_frame_3 - 0.029 13.2 0.0 0.035 12.9 0.0 1.0 1 0 0 1 1 1 0 Nodulation protein Z (NodZ) Alpha-E PF04168.12 NODE_73951_length_213_cov_1.797753_g66010_i0forward_frame_3 - 0.074 12.8 0.1 0.076 12.8 0.1 1.0 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. LOH1CR12 PF10158.9 NODE_73947_length_213_cov_1.820225_g66006_i0forward_frame_3 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 1 0 1 1 1 0 Tumour suppressor protein RNA_pol_A_CTD PF03118.15 NODE_73945_length_213_cov_1.837079_g66004_i0reverse_frame_3 - 0.091 12.5 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain Ion_trans PF00520.31 NODE_73944_length_213_cov_1.837079_g66003_i0forward_frame_2 - 3.4e-05 23.2 4.3 3.6e-05 23.1 4.3 1.0 1 0 0 1 1 1 1 Ion transport protein DUF1828 PF08861.10 NODE_73941_length_213_cov_1.859551_g66000_i0forward_frame_2 - 0.059 13.7 0.1 0.061 13.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF1828 Nitrate_red_gam PF02665.14 NODE_73939_length_213_cov_1.893258_g65998_i0reverse_frame_3 - 0.086 12.4 0.0 0.086 12.4 0.0 1.1 1 0 0 1 1 1 0 Nitrate reductase gamma subunit SNARE PF05739.19 NODE_73939_length_213_cov_1.893258_g65998_i0forward_frame_3 - 0.055 13.5 0.2 0.077 13.0 0.2 1.2 1 0 0 1 1 1 0 SNARE domain PBECR3 PF18812.1 NODE_73936_length_213_cov_1.926966_g65995_i0reverse_frame_2 - 0.21 11.6 4.4 0.37 10.8 4.4 1.6 1 1 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 ADH_zinc_N PF00107.26 NODE_73935_length_213_cov_2.005618_g65994_i0forward_frame_3 - 0.084 12.9 0.0 0.09 12.8 0.0 1.1 1 0 0 1 1 1 0 Zinc-binding dehydrogenase ABC_membrane PF00664.23 NODE_73934_length_213_cov_2.016854_g65993_i0forward_frame_2 - 1.5e-07 31.4 0.0 1.7e-07 31.2 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF1611_N PF17396.2 NODE_73934_length_213_cov_2.016854_g65993_i0forward_frame_2 - 0.09 13.0 0.0 0.29 11.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_N) Rossmann-like domain Phospholamban PF04272.14 NODE_73933_length_213_cov_2.033708_g65992_i0reverse_frame_2 - 1.1 8.8 11.5 2.1 7.9 11.5 1.6 1 1 0 1 1 1 0 Phospholamban Adipogenin PF15202.6 NODE_73925_length_213_cov_2.134831_g65984_i0forward_frame_2 - 0.071 13.1 0.4 0.071 13.1 0.4 1.5 2 0 0 2 2 2 0 Adipogenin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks352.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks352.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks352.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks352.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MMTV_SAg PF01054.17 NODE_73923_length_213_cov_2.151685_g65982_i0forward_frame_2 - 0.083 12.4 0.0 0.089 12.3 0.0 1.1 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen CPSase_C PF18302.1 NODE_73918_length_213_cov_2.252809_g65977_i0forward_frame_2 - 0.035 14.4 0.2 0.15 12.5 0.2 2.1 1 0 0 1 1 1 0 Carbamoyl phosphate synthetase C-terminal domain CAAD PF14159.6 NODE_73916_length_213_cov_2.337079_g65975_i0reverse_frame_3 - 0.15 11.9 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DUF2322 PF10084.9 NODE_73915_length_213_cov_2.348315_g65974_i0reverse_frame_3 - 0.092 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2322) RNA_pol_Rpb1_R PF05001.13 NODE_73915_length_213_cov_2.348315_g65974_i0reverse_frame_2 - 0.44 11.0 6.4 4.1 7.9 0.1 2.6 2 1 0 2 2 2 0 RNA polymerase Rpb1 C-terminal repeat Kinesin PF00225.23 NODE_73914_length_213_cov_2.353933_g65973_i0reverse_frame_2 - 6.5e-20 71.3 1.2 6.9e-20 71.2 1.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain WD40 PF00400.32 NODE_73905_length_213_cov_2.528090_g65964_i0reverse_frame_2 - 0.00017 22.3 0.7 0.00029 21.6 0.3 1.6 2 0 0 2 2 2 1 WD domain, G-beta repeat STELLO PF03385.17 NODE_73905_length_213_cov_2.528090_g65964_i0forward_frame_3 - 0.068 12.0 0.4 0.068 12.0 0.4 1.0 1 0 0 1 1 1 0 STELLO glycosyltransferases CBS PF00571.28 NODE_73904_length_213_cov_2.544944_g65963_i0forward_frame_2 - 0.0081 16.6 0.2 0.19 12.2 0.1 2.2 1 1 0 2 2 2 1 CBS domain SPATA19 PF15212.6 NODE_73902_length_213_cov_2.595506_g65961_i0forward_frame_2 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial Peptidase_M54 PF07998.11 NODE_73901_length_213_cov_2.623596_g65960_i0reverse_frame_2 - 0.19 11.7 0.2 0.18 11.8 0.2 1.0 1 0 0 1 1 1 0 Peptidase family M54 Endomucin PF07010.12 NODE_73900_length_213_cov_2.634831_g65959_i0reverse_frame_3 - 0.022 14.8 0.2 0.025 14.5 0.2 1.0 1 0 0 1 1 1 0 Endomucin Cortexin PF11057.8 NODE_73897_length_213_cov_2.735955_g65956_i0reverse_frame_3 - 0.049 13.5 0.5 0.076 12.9 0.5 1.3 1 0 0 1 1 1 0 Cortexin of kidney Peptidase_U32 PF01136.19 NODE_73895_length_213_cov_2.758427_g65954_i0reverse_frame_3 - 2.3e-18 66.2 0.3 2.5e-18 66.1 0.3 1.0 1 0 0 1 1 1 1 Peptidase family U32 IL12 PF03039.14 NODE_73892_length_213_cov_2.825843_g65951_i0reverse_frame_2 - 0.037 13.4 0.1 0.037 13.4 0.1 1.0 1 0 0 1 1 1 0 Interleukin-12 alpha subunit GntR PF00392.21 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 1.1e-19 69.9 1.1 1.2e-19 69.7 1.1 1.1 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.0017 18.3 0.8 0.002 18.1 0.8 1.2 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.014 15.7 0.2 0.017 15.5 0.2 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_24 PF13412.6 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.018 14.6 0.7 0.08 12.5 0.2 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding RPA_C PF08784.11 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.032 14.9 0.0 0.036 14.7 0.0 1.1 1 0 0 1 1 1 0 Replication protein A C terminal RP-C PF03428.13 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.034 13.8 0.3 0.042 13.5 0.3 1.2 1 1 0 1 1 1 0 Replication protein C N-terminal domain TFIIE_alpha PF02002.17 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.037 13.9 0.1 0.05 13.5 0.1 1.4 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_CodY PF08222.11 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.045 13.3 0.1 0.088 12.4 0.0 1.6 2 0 0 2 2 2 0 CodY helix-turn-helix domain HTH_8 PF02954.19 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.046 13.5 0.2 0.087 12.6 0.2 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family HTH_10 PF04967.12 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.063 13.1 0.1 0.1 12.4 0.1 1.3 1 0 0 1 1 1 0 HTH DNA binding domain HTH_20 PF12840.7 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.07 13.2 1.3 0.14 12.2 1.2 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.6 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.082 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.085 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 HTH domain Mnd1 PF03962.15 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.14 12.5 0.0 1.9 8.8 0.0 2.0 2 0 0 2 2 2 0 Mnd1 HTH domain DUF3483 PF11982.8 NODE_73887_length_213_cov_2.955056_g65946_i0reverse_frame_3 - 0.12 12.0 0.0 0.12 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3483) RT_RNaseH_2 PF17919.1 NODE_73884_length_213_cov_3.022472_g65943_i0forward_frame_2 - 0.0016 18.4 0.0 0.0025 17.8 0.0 1.3 1 1 0 1 1 1 1 RNase H-like domain found in reverse transcriptase RT_RNaseH PF17917.1 NODE_73884_length_213_cov_3.022472_g65943_i0forward_frame_2 - 0.018 15.3 0.0 0.022 15.1 0.0 1.2 1 1 0 1 1 1 0 RNase H-like domain found in reverse transcriptase UvsW PF11637.8 NODE_73881_length_213_cov_3.162921_g65940_i0forward_frame_3 - 0.19 11.9 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 ATP-dependant DNA helicase UvsW SP_C-Propep PF08999.10 NODE_73880_length_213_cov_3.185393_g65939_i0reverse_frame_3 - 0.045 13.5 2.8 0.05 13.4 2.8 1.1 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide WXG100 PF06013.12 NODE_73878_length_213_cov_3.230337_g65937_i0reverse_frame_3 - 0.017 15.4 0.6 0.02 15.1 0.6 1.2 1 0 0 1 1 1 0 Proteins of 100 residues with WXG BBE PF08031.12 NODE_73876_length_213_cov_3.292135_g65935_i0reverse_frame_3 - 0.15 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Berberine and berberine like DUF1752 PF08550.10 NODE_73876_length_213_cov_3.292135_g65935_i0forward_frame_2 - 0.13 12.1 1.1 0.21 11.5 1.1 1.4 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1752) VID27 PF08553.10 NODE_73868_length_213_cov_3.679775_g65927_i0reverse_frame_2 - 5.3e-21 75.1 0.2 5.6e-21 75.0 0.2 1.0 1 0 0 1 1 1 1 VID27 C-terminal WD40-like domain WD40 PF00400.32 NODE_73868_length_213_cov_3.679775_g65927_i0reverse_frame_2 - 0.025 15.4 0.0 0.94 10.5 0.0 2.1 2 0 0 2 2 2 0 WD domain, G-beta repeat Haemagg_act PF05860.13 NODE_73868_length_213_cov_3.679775_g65927_i0reverse_frame_2 - 0.045 13.6 0.1 0.057 13.3 0.0 1.3 1 1 0 1 1 1 0 haemagglutination activity domain DUF4489 PF14879.6 NODE_73868_length_213_cov_3.679775_g65927_i0forward_frame_3 - 0.27 11.3 4.6 0.3 11.2 4.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4489) DUF2569 PF10754.9 NODE_73867_length_213_cov_3.724719_g65926_i0reverse_frame_2 - 1e-05 26.0 0.5 1.3e-05 25.7 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2569) TilS PF09179.11 NODE_73866_length_213_cov_3.775281_g65925_i0reverse_frame_2 - 0.017 15.6 0.2 0.033 14.7 0.2 1.4 1 0 0 1 1 1 0 TilS substrate binding domain DUF1514 PF07438.11 NODE_73865_length_213_cov_3.792135_g65924_i0reverse_frame_3 - 0.12 12.3 0.4 0.12 12.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1514) HMG_box PF00505.19 NODE_73865_length_213_cov_3.792135_g65924_i0forward_frame_2 - 0.0018 18.6 0.6 0.0027 18.1 0.1 1.6 2 0 0 2 2 2 1 HMG (high mobility group) box AbfB PF05270.13 NODE_73862_length_213_cov_4.337079_g65921_i0reverse_frame_2 - 0.076 13.0 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 Alpha-L-arabinofuranosidase B (ABFB) domain IncFII_repA PF02387.15 NODE_73860_length_213_cov_6.005618_g65919_i0forward_frame_3 - 0.068 12.4 0.0 0.073 12.3 0.0 1.0 1 0 0 1 1 1 0 IncFII RepA protein family DUF3450 PF11932.8 NODE_73859_length_213_cov_12.629213_g65918_i0reverse_frame_3 - 0.13 11.5 3.0 0.15 11.3 3.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Cnn_1N PF07989.11 NODE_73859_length_213_cov_12.629213_g65918_i0reverse_frame_3 - 0.23 11.6 5.8 0.75 10.0 2.6 2.0 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF5090 PF17009.5 NODE_73859_length_213_cov_12.629213_g65918_i0forward_frame_2 - 0.73 9.8 9.9 0.86 9.5 9.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Herpes_BBRF1 PF04793.12 NODE_73856_length_213_cov_16.556180_g65915_i0forward_frame_3 - 0.044 12.8 0.2 0.048 12.7 0.2 1.0 1 0 0 1 1 1 0 BRRF1-like protein Baculo_PEP_C PF04513.12 NODE_73855_length_213_cov_17.691011_g65914_i0reverse_frame_3 - 0.00072 19.6 0.7 0.00077 19.5 0.7 1.0 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3446 PF11928.8 NODE_73854_length_213_cov_17.949438_g65913_i0reverse_frame_3 - 0.051 13.9 16.6 0.056 13.7 16.6 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain SSP160 PF06933.11 NODE_73854_length_213_cov_17.949438_g65913_i0reverse_frame_3 - 2.7 6.1 12.6 2.7 6.1 12.6 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF3328 PF11807.8 NODE_73854_length_213_cov_17.949438_g65913_i0forward_frame_3 - 0.12 12.2 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) NAM-associated PF14303.6 NODE_73854_length_213_cov_17.949438_g65913_i0forward_frame_2 - 5.4 7.7 9.8 5.8 7.6 9.8 1.0 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain Mucin PF01456.17 NODE_73854_length_213_cov_17.949438_g65913_i0forward_frame_2 - 9.1 6.3 42.1 10 6.1 42.1 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein IQ PF00612.27 NODE_73851_length_213_cov_23.471910_g65910_i0reverse_frame_2 - 2.8 8.0 9.0 0.31 10.9 0.8 3.0 3 0 0 3 3 3 0 IQ calmodulin-binding motif Kelch_6 PF13964.6 NODE_73849_length_213_cov_25.370787_g65908_i0forward_frame_3 - 1.5 9.3 16.1 5.1 7.5 5.0 2.9 1 1 1 2 2 2 0 Kelch motif DUF390 PF04094.14 NODE_73846_length_213_cov_27.786517_g65905_i0reverse_frame_3 - 0.052 11.9 2.0 0.056 11.7 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) Myosin_head PF00063.21 NODE_73846_length_213_cov_27.786517_g65905_i0reverse_frame_2 - 0.002 16.4 0.0 0.002 16.4 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) DUF4834 PF16118.5 NODE_73844_length_213_cov_31.331461_g65903_i0reverse_frame_3 - 0.49 11.4 4.9 0.53 11.3 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) TMEM52 PF14979.6 NODE_73844_length_213_cov_31.331461_g65903_i0forward_frame_3 - 1.1 9.2 4.9 1.3 9.0 4.9 1.1 1 0 0 1 1 1 0 Transmembrane 52 Vezatin PF12632.7 NODE_73837_length_213_cov_39.039326_g65896_i0forward_frame_3 - 0.0096 15.3 1.2 0.011 15.1 1.2 1.0 1 0 0 1 1 1 1 Mysoin-binding motif of peroxisomes DARPP-32 PF05395.12 NODE_73835_length_213_cov_39.887640_g65894_i0forward_frame_3 - 0.11 12.7 0.0 0.12 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 zf-RING_7 PF02591.15 NODE_73833_length_213_cov_44.095506_g65892_i0reverse_frame_3 - 0.14 12.4 0.1 0.47 10.7 0.1 1.8 2 0 0 2 2 2 0 C4-type zinc ribbon domain DUF1419 PF07215.11 NODE_73832_length_213_cov_44.258427_g65891_i0reverse_frame_2 - 0.042 13.9 0.1 0.05 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1419) DUF3671 PF12420.8 NODE_73829_length_213_cov_45.393258_g65888_i0reverse_frame_2 - 0.022 14.8 0.2 0.046 13.8 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function ORMDL PF04061.14 NODE_73829_length_213_cov_45.393258_g65888_i0reverse_frame_2 - 0.058 13.2 0.3 0.068 13.0 0.3 1.1 1 0 0 1 1 1 0 ORMDL family Polysacc_syn_2C PF08485.10 NODE_73829_length_213_cov_45.393258_g65888_i0forward_frame_2 - 0.017 14.8 0.0 0.026 14.2 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein C-terminal BDV_M PF16520.5 NODE_73824_length_213_cov_48.634831_g65883_i0reverse_frame_3 - 0.1 13.0 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae DciA PF05258.12 NODE_73822_length_213_cov_50.837079_g65881_i0forward_frame_3 - 0.095 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Dna[CI] antecedent, DciA OTT_1508_deam PF14441.6 NODE_73816_length_213_cov_54.938202_g65875_i0forward_frame_2 - 0.18 11.8 1.6 0.18 11.8 1.6 1.4 1 1 0 1 1 1 0 OTT_1508-like deaminase RNA_pol_Rpb2_2 PF04561.14 NODE_73813_length_213_cov_60.932584_g65872_i0forward_frame_2 - 0.2 11.3 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 2 Ribosomal_S24e PF01282.19 NODE_73811_length_213_cov_63.168539_g65870_i0reverse_frame_2 - 2.6e-19 69.0 0.1 3.1e-19 68.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e DUF971 PF06155.12 NODE_73810_length_213_cov_66.589888_g65869_i0reverse_frame_2 - 0.003 18.1 0.3 0.0038 17.8 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF971) DUF202 PF02656.15 NODE_73810_length_213_cov_66.589888_g65869_i0reverse_frame_2 - 0.051 14.0 0.0 0.084 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF202) G6PD_C PF02781.16 NODE_73808_length_213_cov_68.539326_g65867_i0reverse_frame_3 - 7e-07 28.7 0.0 7.2e-07 28.7 0.0 1.0 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain SMC_Nse1 PF07574.13 NODE_73807_length_213_cov_70.179775_g65866_i0forward_frame_2 - 0.013 15.4 0.2 0.014 15.2 0.2 1.0 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex PurS PF02700.14 NODE_73807_length_213_cov_70.179775_g65866_i0forward_frame_2 - 0.038 14.2 0.2 0.051 13.8 0.2 1.4 1 1 0 1 1 1 0 Phosphoribosylformylglycinamidine (FGAM) synthase CARD_2 PF16739.5 NODE_73807_length_213_cov_70.179775_g65866_i0forward_frame_2 - 0.052 13.5 0.1 0.11 12.5 0.0 1.5 1 1 0 1 1 1 0 Caspase recruitment domain Babuvirus_MP PF07234.11 NODE_73806_length_213_cov_71.921348_g65865_i0reverse_frame_3 - 0.19 11.9 0.9 0.21 11.7 0.9 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein zf-C2H2 PF00096.26 NODE_73804_length_213_cov_81.252809_g65863_i0reverse_frame_3 - 0.0014 19.0 0.5 0.0014 19.0 0.5 1.8 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_73804_length_213_cov_81.252809_g65863_i0reverse_frame_3 - 0.0036 17.7 5.8 0.0074 16.7 0.5 2.2 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_73804_length_213_cov_81.252809_g65863_i0reverse_frame_3 - 0.08 13.8 3.5 0.32 11.9 0.3 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger cEGF PF12662.7 NODE_73803_length_213_cov_84.797753_g65862_i0forward_frame_2 - 0.017 15.0 2.3 0.017 15.0 2.3 2.2 4 0 0 4 4 4 0 Complement Clr-like EGF-like DUF4215 PF13948.6 NODE_73803_length_213_cov_84.797753_g65862_i0forward_frame_2 - 0.057 13.9 0.4 0.16 12.4 0.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4215) Antistasin PF02822.14 NODE_73803_length_213_cov_84.797753_g65862_i0forward_frame_2 - 1.5 9.5 6.4 2.4 8.9 1.1 3.5 4 1 0 4 4 4 0 Antistasin family NB-LRR PF12061.8 NODE_73799_length_213_cov_151.893258_g65858_i0forward_frame_2 - 0.15 11.4 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Late blight resistance protein R1 OrfA PF17495.2 NODE_73782_length_213_cov_130408.735955_g65841_i0reverse_frame_3 - 0.074 13.2 0.1 0.084 13.0 0.1 1.1 1 0 0 1 1 1 0 Vpr-like OrfA Nodulin_late PF07127.11 NODE_73782_length_213_cov_130408.735955_g65841_i0forward_frame_2 - 0.069 13.5 0.1 0.088 13.2 0.1 1.1 1 0 0 1 1 1 0 Late nodulin protein DUF5606 PF18347.1 NODE_73781_length_213_cov_2722887.483146_g65840_i0reverse_frame_3 - 0.15 12.3 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5606) SfsA PF03749.13 ORF99809 - 1.8e-16 60.3 0.1 2e-16 60.1 0.1 1.0 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain Cobl PF09469.10 ORF99809 - 0.15 12.3 0.0 0.17 12.1 0.0 1.0 1 0 0 1 1 1 0 Cordon-bleu ubiquitin-like domain Pox_E8 PF03394.13 ORF99270 - 0.07 12.7 0.0 0.078 12.5 0.0 1.0 1 0 0 1 1 1 0 Poxvirus E8 protein EF-hand_1 PF00036.32 ORF99037 - 0.15 11.7 0.7 0.29 10.8 0.7 1.4 1 0 0 1 1 1 0 EF hand Fer2 PF00111.27 ORF98057 - 0.079 12.9 1.6 0.11 12.5 1.6 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain zf-LITAF-like PF10601.9 ORF97548 - 1.4 9.2 6.6 0.55 10.5 0.8 2.3 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain cNMP_binding PF00027.29 ORF97461 - 2.6e-07 30.6 0.0 3e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF1281_C PF18406.1 ORF97461 - 0.032 13.9 0.1 0.036 13.8 0.1 1.1 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein MORN PF02493.20 ORF97439 - 2.1e-09 36.7 8.7 5.3e-06 26.0 0.4 3.0 3 0 0 3 3 3 2 MORN repeat DsbC PF11412.8 ORF97406 - 0.11 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Disulphide bond corrector protein DsbC DUF4655 PF15548.6 ORF97389 - 0.061 12.3 0.3 0.062 12.3 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4655) Glucokinase PF02685.16 ORF97357 - 4.6e-10 39.0 0.0 4.8e-10 38.9 0.0 1.0 1 0 0 1 1 1 1 Glucokinase TRP_2 PF08344.11 ORF97256 - 0.027 14.7 0.9 0.03 14.5 0.1 1.4 2 0 0 2 2 2 0 Transient receptor ion channel II DUF3894 PF13033.6 ORF9717 - 0.013 15.6 0.0 0.021 14.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3894) bZIP_1 PF00170.21 ORF96942 - 0.0023 18.0 3.5 0.0023 18.0 3.5 2.1 1 1 1 2 2 2 1 bZIP transcription factor DivIC PF04977.15 ORF96942 - 0.0033 17.1 7.0 0.0038 17.0 4.3 1.9 1 1 1 2 2 2 1 Septum formation initiator HALZ PF02183.18 ORF96942 - 0.0035 17.5 6.5 0.0088 16.2 4.0 2.7 1 1 1 2 2 2 1 Homeobox associated leucine zipper Sec66 PF09802.9 ORF96942 - 0.0092 15.6 1.0 0.011 15.3 1.0 1.0 1 0 0 1 1 1 1 Preprotein translocase subunit Sec66 Filament PF00038.21 ORF96942 - 0.01 15.5 6.5 0.01 15.4 6.5 1.0 1 0 0 1 1 1 0 Intermediate filament protein BCAS2 PF05700.11 ORF96942 - 0.014 15.1 4.1 0.014 15.1 4.1 1.0 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 2 (BCAS2) TPR_MLP1_2 PF07926.12 ORF96942 - 0.017 15.2 7.5 0.022 14.8 7.5 1.3 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein GAT PF03127.14 ORF96942 - 0.028 14.7 2.9 0.032 14.5 2.9 1.2 1 0 0 1 1 1 0 GAT domain YabA PF06156.13 ORF96942 - 0.033 14.8 4.1 0.045 14.4 4.1 1.4 1 1 0 1 1 1 0 Initiation control protein YabA DUF4618 PF15397.6 ORF96942 - 0.036 13.5 7.0 0.041 13.3 7.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) NRBF2 PF08961.10 ORF96942 - 0.042 13.5 3.1 0.046 13.3 3.1 1.2 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator HMMR_C PF15908.5 ORF96942 - 0.058 13.7 7.6 0.11 12.8 5.7 1.9 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal JIP_LZII PF16471.5 ORF96942 - 0.064 13.4 4.9 0.48 10.6 0.5 2.1 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II Uso1_p115_C PF04871.13 ORF96942 - 0.12 12.7 9.9 0.14 12.5 9.9 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF1640 PF07798.11 ORF96942 - 0.16 12.0 6.3 0.46 10.5 6.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) ZapB PF06005.12 ORF96942 - 0.24 11.9 6.8 1.4 9.4 6.8 2.1 1 1 0 1 1 1 0 Cell division protein ZapB DUF4407 PF14362.6 ORF96942 - 0.42 9.9 3.6 0.43 9.9 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HAUS6_N PF14661.6 ORF96942 - 0.42 10.1 5.7 0.45 10.1 5.7 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus UPF0449 PF15136.6 ORF96942 - 0.52 10.8 5.9 0.59 10.6 5.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 TMCO5 PF14992.6 ORF96942 - 0.59 9.7 8.9 0.63 9.6 8.9 1.0 1 0 0 1 1 1 0 TMCO5 family DUF3139 PF11337.8 ORF96942 - 0.62 10.8 10.8 2.3 8.9 2.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) Bap31_Bap29_C PF18035.1 ORF96942 - 0.75 9.8 13.4 2 8.5 1.6 2.2 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain TMPIT PF07851.13 ORF96942 - 1 8.5 7.0 1.2 8.4 7.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein Mem_trans PF03547.18 ORF96942 - 1.3 7.3 2.4 1.4 7.3 2.4 1.0 1 0 0 1 1 1 0 Membrane transport protein LCD1 PF09798.9 ORF96942 - 2.2 6.7 11.6 2.2 6.7 11.6 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein CHD5 PF04420.14 ORF96942 - 5.2 6.9 7.8 6.2 6.7 7.8 1.0 1 0 0 1 1 1 0 CHD5-like protein 60KD_IMP PF02096.20 ORF96942 - 9.7 6.1 7.3 2.1 8.2 0.5 2.0 1 1 1 2 2 2 0 60Kd inner membrane protein TMEM247 PF15444.6 ORF96612 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 APA3_viroporin PF11289.8 ORF95976 - 0.092 12.3 1.4 0.11 12.0 1.4 1.2 1 1 0 1 1 1 0 Coronavirus accessory protein 3a Pox_Ag35 PF03286.14 ORF95975 - 0.065 13.0 0.6 0.072 12.9 0.6 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein TraI_2_C PF07515.11 ORF95960 - 0.095 12.6 0.4 0.1 12.5 0.4 1.2 1 1 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term TFIID-18kDa PF02269.16 ORF95946 - 6.1e-05 23.0 0.0 7.2e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit Uso1_p115_C PF04871.13 ORF95946 - 0.13 12.7 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region TTC5_OB PF16669.5 ORF95883 - 0.06 13.0 0.1 0.13 12.0 0.1 1.6 1 1 1 2 2 2 0 Tetratricopeptide repeat protein 5 OB fold domain Nse5 PF08691.10 ORF95739 - 0.058 12.1 0.1 0.059 12.0 0.1 1.0 1 0 0 1 1 1 0 DNA repair proteins Nse5 and Nse6 Toxin_28 PF08115.11 ORF95733 - 0.019 14.8 0.3 0.035 14.0 0.3 1.4 1 0 0 1 1 1 0 SFI toxin family COX7a PF02238.15 ORF94319 - 0.071 13.5 0.2 0.13 12.7 0.2 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VII UPF0515 PF15135.6 ORF94276 - 0.054 12.9 0.0 0.06 12.7 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 DUF386 PF04074.12 ORF94241 - 2.9e-17 62.9 0.0 3e-17 62.9 0.0 1.0 1 0 0 1 1 1 1 YhcH/YjgK/YiaL Cupin_2 PF07883.11 ORF94241 - 0.0013 18.4 0.0 0.0015 18.2 0.0 1.3 1 1 0 1 1 1 1 Cupin domain Wx5_PLAF3D7 PF09688.10 ORF94237 - 0.0068 16.4 0.1 0.0082 16.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (Wx5_PLAF3D7) TraI_2_C PF07515.11 ORF94222 - 0.095 12.6 0.4 0.1 12.5 0.4 1.2 1 1 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term DUF384 PF04064.13 ORF94109 - 0.21 11.5 0.1 0.32 10.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF384) RPS31 PF17067.5 ORF94022 - 0.042 14.0 0.2 0.045 13.9 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e Methyltransf_33 PF10017.9 ORF93653 - 0.041 13.0 0.0 0.041 13.0 0.0 1.0 1 0 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent c-SKI_SMAD_bind PF08782.10 ORF93552 - 0.05 13.8 0.5 0.067 13.4 0.5 1.2 1 0 0 1 1 1 0 c-SKI Smad4 binding domain IMS_HHH PF11798.8 ORF93412 - 5.1e-06 26.5 0.1 1.8e-05 24.8 0.1 1.8 2 0 0 2 2 2 1 IMS family HHH motif BAF PF02961.14 ORF93412 - 0.0029 18.0 0.0 0.0033 17.8 0.0 1.2 1 0 0 1 1 1 1 Barrier to autointegration factor Cdd1 PF11731.8 ORF93412 - 0.025 14.8 0.0 0.031 14.5 0.0 1.1 1 0 0 1 1 1 0 Pathogenicity locus WD40 PF00400.32 ORF93318 - 0.0038 18.0 0.6 0.48 11.4 0.1 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat G-gamma PF00631.22 ORF90631 - 0.016 15.2 0.3 0.022 14.8 0.3 1.2 1 0 0 1 1 1 0 GGL domain RICTOR_M PF14666.6 ORF90543 - 0.094 12.5 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain CAF1 PF04857.20 ORF90452 - 4.2e-18 65.6 0.1 4.3e-18 65.6 0.1 1.0 1 0 0 1 1 1 1 CAF1 family ribonuclease DNA_pol_A_exo1 PF01612.20 ORF90452 - 0.0081 15.9 0.0 0.0099 15.6 0.0 1.2 1 1 0 1 1 1 1 3'-5' exonuclease UCR_UQCRX_QCR9 PF05365.12 ORF89913 - 2.8e-11 43.2 0.3 3.6e-11 42.8 0.3 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like PPR PF01535.20 ORF89913 - 0.0076 16.4 0.0 0.012 15.8 0.0 1.3 1 0 0 1 1 1 1 PPR repeat DUF1146 PF06612.11 ORF89913 - 0.095 12.8 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1146) Syntaxin_2 PF14523.6 ORF89839 - 0.014 15.7 3.5 0.019 15.3 3.5 1.3 1 1 0 1 1 1 0 Syntaxin-like protein DASH_Duo1 PF08651.10 ORF89839 - 0.081 12.7 0.8 0.12 12.2 0.6 1.5 1 1 0 1 1 1 0 DASH complex subunit Duo1 Fim-adh_lectin PF09222.10 ORF89747 - 0.11 12.0 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Fimbrial adhesin F17-AG, lectin domain FixS PF03597.15 ORF8920 - 3.1 7.6 6.6 14 5.5 0.1 2.3 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type HMw1_D2 PF18254.1 ORF89191 - 0.066 13.6 0.7 0.85 10.0 0.1 2.0 1 1 1 2 2 2 0 HMW1 domain 2 HOK_GEF PF01848.16 ORF89136 - 3.9e-21 74.2 6.9 4.7e-21 73.9 6.9 1.1 1 0 0 1 1 1 1 Hok/gef family DUF4231 PF14015.6 ORF89136 - 0.027 14.9 0.1 0.029 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) Glycoprotein_G PF00802.19 ORF88712 - 0.096 12.0 0.9 0.094 12.1 0.9 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G zf-RING_10 PF16685.5 ORF88508 - 0.14 12.3 0.1 0.19 11.9 0.1 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 HIGH_NTase1 PF05636.11 ORF88400 - 0.028 13.6 0.0 0.035 13.3 0.0 1.1 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase zf-CCCH_2 PF14608.6 ORF88334 - 0.69 10.5 19.5 2.5 8.7 3.5 3.1 1 1 1 3 3 3 0 RNA-binding, Nab2-type zinc finger DUF3275 PF11679.8 ORF88231 - 4.9 7.1 5.9 5.2 7.0 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) PCSK9_C2 PF18464.1 ORF88183 - 0.028 14.4 0.1 0.037 14.0 0.1 1.3 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain MIT PF04212.18 ORF87898 - 0.034 14.2 0.4 0.042 13.9 0.4 1.1 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain TPR_2 PF07719.17 ORF87898 - 0.041 14.0 3.0 0.092 12.9 0.2 2.5 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF87898 - 0.051 13.5 0.6 0.56 10.2 0.3 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF1656 PF07869.12 ORF87352 - 0.057 13.4 0.1 0.18 11.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1656) Tombus_movement PF05318.12 ORF87078 - 0.014 16.2 4.5 0.018 15.9 4.5 1.1 1 0 0 1 1 1 0 Tombusvirus movement protein DUF5323 PF17257.2 ORF87078 - 0.17 11.8 2.1 0.23 11.4 2.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5323) stn_TNFRSF12A PF12191.8 ORF86957 - 0.047 13.9 0.3 0.061 13.6 0.3 1.4 1 1 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain Phage_TAC_4 PF08748.11 ORF86831 - 0.11 12.8 0.0 0.23 11.8 0.0 1.6 1 1 0 1 1 1 0 Phage tail assembly chaperone Response_reg PF00072.24 ORF86727 - 0.04 14.1 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Response regulator receiver domain UL11 PF11094.8 ORF86311 - 2.2 8.3 4.7 1.2 9.1 2.6 1.6 2 0 0 2 2 2 0 Membrane-associated tegument protein OAD_gamma PF04277.13 ORF85942 - 0.15 12.7 0.2 0.17 12.5 0.2 1.1 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain SASRP1 PF15160.6 ORF85910 - 0.019 14.7 0.1 0.019 14.7 0.1 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 Cue1_U7BR PF18499.1 ORF85910 - 0.065 13.3 0.3 0.55 10.3 0.0 2.2 1 1 1 2 2 2 0 Ubc7p-binding region of Cue1 zf-HC3 PF16827.5 ORF85763 - 0.00079 19.6 1.5 0.0012 19.0 0.7 1.6 1 1 1 2 2 2 1 zinc-finger Chordopox_A13L PF05961.11 ORF85553 - 0.0037 17.5 0.4 0.0055 16.9 0.3 1.4 1 1 0 1 1 1 1 Chordopoxvirus A13L protein DUF1199 PF06712.11 ORF8544 - 0.12 12.4 2.5 0.23 11.5 2.3 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1199) Pap_E4 PF02711.14 ORF8544 - 0.26 12.2 1.8 0.3 12.1 1.8 1.1 1 0 0 1 1 1 0 E4 protein DUF2138 PF09909.9 ORF85404 - 0.028 12.8 0.3 0.029 12.7 0.3 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2138) YdjM PF04307.14 ORF85404 - 0.038 13.3 0.1 0.038 13.3 0.1 1.1 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase CRT-like PF08627.10 ORF85212 - 0.13 11.2 0.2 0.13 11.2 0.2 1.0 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like PhnJ PF06007.11 ORF84537 - 0.045 12.7 0.0 0.051 12.6 0.0 1.1 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnJ Trp_oprn_chp PF09534.10 ORF83774 - 0.084 12.7 1.3 0.097 12.5 1.3 1.2 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF202 PF02656.15 ORF83774 - 0.16 12.5 0.8 0.2 12.1 0.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF202) SseC PF04888.12 ORF83447 - 0.57 9.7 2.3 0.67 9.5 2.3 1.0 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family DNA_pol_A_exo1 PF01612.20 ORF83024 - 2e-11 43.9 0.0 2.2e-11 43.8 0.0 1.0 1 0 0 1 1 1 1 3'-5' exonuclease stn_TNFRSF12A PF12191.8 ORF82714 - 0.047 13.9 0.3 0.061 13.6 0.3 1.4 1 1 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain AphA_like PF14557.6 ORF82561 - 0.11 12.2 0.2 0.11 12.2 0.2 1.1 1 0 0 1 1 1 0 Putative AphA-like transcriptional regulator FXa_inhibition PF14670.6 ORF82124 - 0.066 13.5 2.5 0.15 12.4 2.5 1.7 1 1 0 1 1 1 0 Coagulation Factor Xa inhibitory site CoA_binding_3 PF13727.6 ORF82045 - 1.4 8.9 4.4 1.5 8.8 4.4 1.0 1 0 0 1 1 1 0 CoA-binding domain Fic_N PF13784.6 ORF81621 - 4.9e-20 71.4 0.0 5.2e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 Fic/DOC family N-terminal Chordopox_A13L PF05961.11 ORF81592 - 0.0037 17.5 0.4 0.0055 16.9 0.3 1.4 1 1 0 1 1 1 1 Chordopoxvirus A13L protein zf_C2HC_14 PF18574.1 ORF81414 - 0.12 12.2 3.6 0.41 10.5 3.8 1.8 1 1 1 2 2 2 0 C2HC Zing finger domain HTH_1 PF00126.27 ORF80636 - 0.0062 16.5 0.2 0.0093 15.9 0.1 1.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_37 PF13744.6 ORF80636 - 0.12 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain Ntox34 PF15606.6 ORF80450 - 0.083 13.0 0.6 0.1 12.7 0.6 1.1 1 0 0 1 1 1 0 Bacterial toxin 34 TMEM247 PF15444.6 ORF80162 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 DUF5316 PF17247.2 ORF79893 - 0.063 13.3 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5316) CDC37_C PF08564.10 ORF79842 - 0.048 13.8 0.0 0.053 13.6 0.0 1.1 1 0 0 1 1 1 0 Cdc37 C terminal domain C1_1 PF00130.22 ORF79713 - 0.026 14.4 1.9 0.044 13.7 1.1 1.7 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf_Rg PF17915.1 ORF79713 - 0.17 11.3 3.3 0.23 10.9 2.2 1.8 1 1 1 2 2 2 0 Reverse gyrase zinc finger DUF2605 PF10792.9 ORF78949 - 0.026 14.5 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2605) TMEM247 PF15444.6 ORF78886 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 DUF1685 PF07939.11 ORF78577 - 0.0088 15.8 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1685) DUF4644 PF15486.6 ORF7811 - 0.028 14.2 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4644) NRDD PF13597.6 ORF77964 - 0.078 11.7 0.0 0.079 11.7 0.0 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase CRM1_repeat_3 PF18787.1 ORF77757 - 0.77 9.9 3.9 3.8 7.7 0.0 2.2 2 0 0 2 2 2 0 CRM1 / Exportin repeat 3 GlpM PF06942.12 ORF77739 - 0.026 14.9 6.7 0.03 14.7 6.7 1.1 1 0 0 1 1 1 0 GlpM protein DUF3038 PF11237.8 ORF77730 - 0.036 14.1 0.8 0.041 13.9 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) Gti1_Pac2 PF09729.9 ORF77724 - 0.09 12.9 0.0 0.09 12.9 0.0 1.0 1 0 0 1 1 1 0 Gti1/Pac2 family Cas_csx3 PF09620.10 ORF76822 - 0.063 13.2 0.0 0.074 12.9 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_csx3) G-gamma PF00631.22 ORF76709 - 0.0034 17.4 0.4 0.0043 17.0 0.4 1.3 1 0 0 1 1 1 1 GGL domain SF-assemblin PF06705.11 ORF76709 - 0.026 13.9 0.3 0.029 13.7 0.3 1.0 1 0 0 1 1 1 0 SF-assemblin/beta giardin Jnk-SapK_ap_N PF09744.9 ORF76709 - 0.057 13.6 1.7 0.063 13.5 1.7 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF5316 PF17247.2 ORF76411 - 0.063 13.3 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5316) DUF5316 PF17247.2 ORF76406 - 0.063 13.3 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5316) CSD PF00313.22 ORF76311 - 8.8e-33 112.0 0.2 9.5e-33 111.9 0.2 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF76311 - 3.2e-05 23.5 0.5 5.3e-05 22.8 0.5 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain AAA_lid_3 PF17862.1 ORF76112 - 0.0063 16.3 0.0 0.01 15.7 0.0 1.3 1 0 0 1 1 1 1 AAA+ lid domain HAD_2 PF13419.6 ORF76112 - 0.017 15.2 0.0 0.036 14.2 0.0 1.5 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase WAPL PF07814.13 ORF76058 - 0.016 14.0 0.1 0.018 13.9 0.1 1.0 1 0 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin DUF5048 PF16467.5 ORF74913 - 0.12 12.7 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5048) ERGIC_N PF13850.6 ORF74908 - 0.084 13.2 0.4 0.095 13.1 0.4 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Phage_holin_3_6 PF07332.11 ORF74683 - 0.39 10.8 5.8 0.47 10.5 5.8 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 ORF74683 - 0.87 8.3 1.9 0.75 8.5 1.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) RRS1 PF04939.12 ORF73408 - 0.029 14.3 0.0 0.034 14.0 0.0 1.2 1 0 0 1 1 1 0 Ribosome biogenesis regulatory protein (RRS1) ABC_membrane PF00664.23 ORF73116 - 0.0085 15.8 0.5 0.0093 15.6 0.5 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF3602 PF12223.8 ORF72911 - 0.048 14.3 1.4 0.052 14.2 1.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3602) HEAT PF02985.22 ORF72827 - 0.0062 16.7 0.1 0.079 13.3 0.0 2.1 2 0 0 2 2 2 1 HEAT repeat PMAIP1 PF15150.6 ORF72739 - 0.18 11.7 0.8 0.28 11.1 0.8 1.3 1 0 0 1 1 1 0 Phorbol-12-myristate-13-acetate-induced MENTAL PF10457.9 ORF7272 - 0.0064 16.3 0.0 0.007 16.2 0.0 1.0 1 0 0 1 1 1 1 Cholesterol-capturing domain DUF2140 PF09911.9 ORF7272 - 0.072 12.6 0.0 0.077 12.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2140) SieB PF14163.6 ORF7272 - 0.075 12.5 0.1 0.094 12.2 0.1 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B DUF3708 PF12501.8 ORF7272 - 0.14 11.9 0.0 0.15 11.8 0.0 1.0 1 0 0 1 1 1 0 Phosphate ATP-binding cassette transporter DUF948 PF06103.11 ORF7272 - 0.14 12.4 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) SopA_C PF13979.6 ORF72572 - 0.11 12.2 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 SopA-like catalytic domain DUF2138 PF09909.9 ORF72504 - 0.028 12.8 0.3 0.029 12.7 0.3 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2138) YdjM PF04307.14 ORF72504 - 0.038 13.3 0.1 0.038 13.3 0.1 1.1 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase GlpM PF06942.12 ORF7231 - 0.026 14.9 6.7 0.03 14.7 6.7 1.1 1 0 0 1 1 1 0 GlpM protein Fer4_4 PF12800.7 ORF71681 - 0.0082 16.6 2.4 0.069 13.7 0.3 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain NADH-G_4Fe-4S_3 PF10588.9 ORF71681 - 0.049 13.2 3.6 0.92 9.1 0.5 2.2 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BSD PF03909.17 ORF71574 - 0.16 12.0 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 BSD domain Copine PF07002.16 ORF70856 - 5.6e-10 39.0 0.0 6.2e-10 38.9 0.0 1.0 1 0 0 1 1 1 1 Copine DUF5316 PF17247.2 ORF70732 - 0.063 13.3 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5316) Sulfotransfer_2 PF03567.14 ORF70565 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family Hydrolase_like PF13242.6 ORF7040 - 0.0076 16.3 0.0 0.008 16.2 0.0 1.1 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 ORF7040 - 0.22 11.6 0.0 0.29 11.2 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase P21-Arc PF04062.14 ORF70244 - 1.7e-18 67.3 0.0 2.6e-18 66.7 0.0 1.3 1 1 0 1 1 1 1 ARP2/3 complex ARPC3 (21 kDa) subunit B5 PF03484.15 ORF70244 - 0.057 13.7 0.2 0.087 13.1 0.2 1.3 1 0 0 1 1 1 0 tRNA synthetase B5 domain FSAP_sig_propep PF03032.15 ORF70227 - 7.6 6.7 5.2 2.9 8.0 2.0 1.8 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide Methyltransf_28 PF02636.17 ORF70215 - 0.0008 19.1 0.5 0.00083 19.1 0.5 1.0 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Ribosomal_L31e PF01198.19 ORF70215 - 0.056 13.7 0.1 0.073 13.3 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L31e pPIWI_RE_X PF13111.6 ORF69882 - 0.032 13.4 0.1 0.033 13.4 0.1 1.0 1 0 0 1 1 1 0 pPIWI_RE module N-terminal domain DUF5316 PF17247.2 ORF69673 - 0.063 13.3 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5316) Ndc1_Nup PF09531.10 ORF69527 - 8.8 4.9 11.2 9 4.8 11.2 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup UAF_Rrn10 PF05234.11 ORF69302 - 0.047 13.9 0.0 0.049 13.9 0.0 1.0 1 0 0 1 1 1 0 UAF complex subunit Rrn10 DUF5415 PF17436.2 ORF69302 - 0.071 13.2 0.1 0.097 12.8 0.1 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5415) Sigma_reg_N PF13800.6 ORF69202 - 0.0066 16.7 0.9 0.0089 16.3 0.9 1.2 1 0 0 1 1 1 1 Sigma factor regulator N-terminal Ank_2 PF12796.7 ORF69190 - 0.014 15.9 0.0 0.016 15.8 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank PF00023.30 ORF69190 - 0.047 14.1 0.1 0.68 10.5 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeat Ank_3 PF13606.6 ORF69190 - 0.11 13.2 0.0 6.5 7.7 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeat Ad_cyc_g-alpha PF08509.11 ORF6804 - 0.21 11.3 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 Adenylate cyclase G-alpha binding domain Cytochrom_C550 PF14495.6 ORF67802 - 0.024 14.3 0.1 0.025 14.3 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c-550 domain Ribosomal_L23 PF00276.20 ORF67267 - 3.2e-13 49.8 1.9 1.4e-12 47.8 1.9 1.8 1 1 0 1 1 1 1 Ribosomal protein L23 zf-RING_10 PF16685.5 ORF66896 - 0.14 12.3 0.1 0.19 11.9 0.1 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 Myb_DNA-binding PF00249.31 ORF65925 - 9.2e-05 22.6 0.0 0.00015 21.9 0.0 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF65925 - 0.03 14.6 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Myb-like DNA-binding domain RF3_C PF16658.5 ORF65925 - 0.13 12.1 0.0 0.24 11.2 0.0 1.4 1 1 0 1 1 1 0 Class II release factor RF3, C-terminal domain SNF PF00209.18 ORF65296 - 8.8e-11 41.2 7.7 9.3e-11 41.1 7.7 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family PDR_CDR PF06422.12 ORF64508 - 5.5 7.0 8.8 9.8 6.2 8.8 1.7 1 1 0 1 1 1 0 CDR ABC transporter FAM176 PF14851.6 ORF63420 - 0.029 14.0 0.6 0.031 13.9 0.6 1.0 1 0 0 1 1 1 0 FAM176 family ACTH_domain PF00976.18 ORF63399 - 0.34 10.9 0.2 0.34 10.9 0.2 1.8 3 0 0 3 3 3 0 Corticotropin ACTH domain Peptidase_S7 PF00949.21 ORF63075 - 0.14 12.0 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease AphA_like PF14557.6 ORF6153 - 0.11 12.2 0.2 0.11 12.2 0.2 1.1 1 0 0 1 1 1 0 Putative AphA-like transcriptional regulator Sigma_reg_N PF13800.6 ORF6146 - 0.0066 16.7 0.9 0.0089 16.3 0.9 1.2 1 0 0 1 1 1 1 Sigma factor regulator N-terminal PEGSRP PF07623.11 ORF61357 - 0.084 12.7 1.4 0.084 12.7 1.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) GCP_C_terminal PF04130.13 ORF61356 - 0.0054 16.2 0.0 0.0058 16.1 0.0 1.0 1 0 0 1 1 1 1 Gamma tubulin complex component C-terminal Chordopox_A13L PF05961.11 ORF61350 - 0.0037 17.5 0.4 0.0055 16.9 0.3 1.4 1 1 0 1 1 1 1 Chordopoxvirus A13L protein DUF2749 PF10907.8 ORF61221 - 0.63 10.3 2.1 11 6.3 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2749) RPN13_C PF16550.5 ORF61098 - 0.056 13.6 0.1 0.077 13.2 0.1 1.2 1 1 0 1 1 1 0 UCH-binding domain DUF2722 PF10846.8 ORF61098 - 0.06 12.3 0.3 0.058 12.3 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) HATPase_c PF02518.26 ORF6101 - 0.01 16.3 0.1 0.017 15.6 0.1 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Phage_TAC_4 PF08748.11 ORF6101 - 0.035 14.4 0.0 0.039 14.3 0.0 1.0 1 0 0 1 1 1 0 Phage tail assembly chaperone GAGA PF09237.11 ORF60988 - 0.11 12.4 0.0 0.12 12.2 0.0 1.4 1 1 0 1 1 1 0 GAGA factor TMEM208_SND2 PF05620.11 ORF60899 - 0.22 11.3 2.6 0.23 11.3 2.6 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 WBP-1 PF11669.8 ORF60279 - 0.41 11.3 1.7 0.48 11.1 1.7 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 DUF1700 PF08006.11 ORF60279 - 0.66 9.5 8.6 0.64 9.5 8.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Tmemb_9 PF05434.11 ORF60279 - 0.8 9.6 6.9 0.94 9.4 6.9 1.2 1 0 0 1 1 1 0 TMEM9 YfzA PF14118.6 ORF60076 - 0.069 13.6 0.1 0.069 13.6 0.1 1.2 1 0 0 1 1 1 0 YfzA-like protein DUF3724 PF12521.8 ORF59828 - 0.078 12.9 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3724) cNMP_binding PF00027.29 ORF59360 - 8.3e-07 29.0 0.0 1e-06 28.7 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MORN PF02493.20 ORF59122 - 2.1e-09 36.7 8.7 5.3e-06 26.0 0.4 3.0 3 0 0 3 3 3 2 MORN repeat Ribosomal_S28e PF01200.18 ORF58247 - 1.6e-32 111.3 1.2 1.8e-32 111.1 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e MIG-14_Wnt-bd PF06664.12 ORF58091 - 0.13 11.5 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion Polysacc_synt_C PF14667.6 ORF57730 - 0.11 12.6 10.6 0.12 12.4 10.6 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain Tmemb_55A PF09788.9 ORF57730 - 0.35 9.9 3.0 0.38 9.8 3.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A Cytochrom_B_C PF00032.17 ORF57730 - 1.2 9.5 5.5 0.39 11.0 2.2 1.7 1 1 1 2 2 2 0 Cytochrome b(C-terminal)/b6/petD PspC PF04024.12 ORF57730 - 2.6 7.9 7.5 0.66 9.8 1.1 2.1 2 0 0 2 2 2 0 PspC domain UspA1_rep PF18792.1 ORF57710 - 2.7 8.7 4.6 6.7 7.5 0.1 2.6 3 0 0 3 3 3 0 Ubiquitous surface protein adhesin repeat NikR_C PF08753.11 ORF57417 - 0.12 12.5 0.2 0.16 12.1 0.2 1.1 1 0 0 1 1 1 0 NikR C terminal nickel binding domain Arm_vescicular PF18770.1 ORF5715 - 0.022 14.7 0.3 0.041 13.8 0.2 1.5 1 1 1 2 2 2 0 Armadillo tether-repeat of vescicular transport factor DUF3724 PF12521.8 ORF5715 - 0.15 12.0 0.0 0.29 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3724) DUF5316 PF17247.2 ORF57116 - 0.063 13.3 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5316) DUF4726 PF15855.5 ORF56990 - 0.056 13.7 0.0 0.064 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) DUF4955 PF16315.5 ORF56990 - 0.084 13.1 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4955) NUMOD1 PF07453.13 ORF5633 - 0.16 12.3 0.7 0.16 12.3 0.7 2.1 2 0 0 2 2 2 0 NUMOD1 domain FAD-oxidase_C PF02913.19 ORF56303 - 1.5e-17 64.1 0.1 1.5e-17 64.1 0.1 1.0 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain Arrestin_N PF00339.29 ORF55974 - 0.00091 19.3 0.1 0.00091 19.3 0.1 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain CytB6-F_Fe-S PF08802.10 ORF5573 - 0.43 10.6 3.6 2.7 8.1 0.3 2.1 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit Fer2 PF00111.27 ORF55277 - 0.079 12.9 1.6 0.11 12.5 1.6 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain SNAP PF14938.6 ORF55180 - 2.1e-16 60.2 4.3 2.2e-16 60.1 4.3 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP NSF PF02071.20 ORF55180 - 0.023 15.3 1.1 2.3 9.4 0.2 2.7 2 0 0 2 2 2 0 Aromatic-di-Alanine (AdAR) repeat Ribonuclease_3 PF00636.26 ORF55118 - 0.00042 20.9 0.0 0.00048 20.7 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease III domain Ribonucleas_3_3 PF14622.6 ORF55118 - 0.002 18.3 0.0 0.0022 18.1 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease-III-like AAA_33 PF13671.6 ORF54651 - 1.8e-06 28.2 0.0 1.8e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 AAA domain Histone_HNS PF00816.21 ORF54621 - 4.6e-15 56.2 1.8 5.2e-15 56.0 1.8 1.0 1 0 0 1 1 1 1 H-NS histone family Hist_deacetyl PF00850.19 ORF54544 - 4.7e-08 32.9 0.0 5.3e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Ribosomal_L38e PF01781.18 ORF54083 - 7.6e-35 118.8 3.9 8.2e-35 118.7 3.9 1.0 1 0 0 1 1 1 1 Ribosomal L38e protein family DUF3637 PF12337.8 ORF53638 - 0.15 12.4 0.1 0.18 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3637) Dpy-30 PF05186.13 ORF53606 - 4.4e-19 67.9 0.0 5.3e-19 67.6 0.0 1.1 1 0 0 1 1 1 1 Dpy-30 motif RIIa PF02197.17 ORF53606 - 0.034 13.8 0.0 0.052 13.2 0.0 1.4 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks353.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks353.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks353.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks353.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:22:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2417 PF10329.9 ORF53352 - 0.94 8.9 4.2 1.2 8.5 4.2 1.2 1 0 0 1 1 1 0 Region of unknown function (DUF2417) XAF1_C PF18608.1 ORF53338 - 0.061 12.9 1.1 0.099 12.2 0.1 1.8 1 1 1 2 2 2 0 XIAP-associated factor 1 C-terminal domain Vir_act_alpha_C PF10400.9 ORF53240 - 0.1 13.3 2.5 3.5 8.4 0.1 2.0 1 1 1 2 2 2 0 Virulence activator alpha C-term DUF346 PF03984.13 ORF53228 - 0.067 13.0 0.0 0.099 12.4 0.0 1.3 1 0 0 1 1 1 0 Repeat of unknown function (DUF346) TILa PF12714.7 ORF52858 - 8.8 6.4 19.2 2.7e+02 1.6 18.0 2.8 1 1 0 1 1 1 0 TILa domain Pex14_N PF04695.13 ORF52834 - 4.5 7.9 20.0 4.9 7.8 20.0 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region LMBR1 PF04791.16 ORF52797 - 0.16 10.8 0.1 0.18 10.7 0.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Response_reg PF00072.24 ORF52762 - 0.04 14.1 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Response regulator receiver domain T6SS_VipA PF05591.12 ORF52612 - 0.14 11.9 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 EF-hand_7 PF13499.6 ORF52333 - 0.00014 22.2 0.1 0.0002 21.8 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF52333 - 0.0012 18.2 0.3 0.0029 17.0 0.3 1.7 1 1 1 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF52333 - 0.028 14.3 0.2 0.054 13.4 0.2 1.5 1 0 0 1 1 1 0 EF-hand domain zf-CCHC_2 PF13696.6 ORF52333 - 0.44 10.4 1.8 0.54 10.1 0.1 1.8 2 0 0 2 2 2 0 Zinc knuckle CoA_binding_3 PF13727.6 ORF52148 - 1.4 8.9 4.4 1.5 8.8 4.4 1.0 1 0 0 1 1 1 0 CoA-binding domain F-box-like PF12937.7 ORF51896 - 0.072 13.0 0.2 0.1 12.5 0.2 1.3 1 0 0 1 1 1 0 F-box-like TMEM247 PF15444.6 ORF51702 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 DUF4160 PF13711.6 ORF51534 - 0.081 13.3 0.4 0.12 12.7 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4160) NP1-WLL PF11733.8 ORF51340 - 0.27 11.0 2.6 0.27 11.0 2.6 1.0 1 0 0 1 1 1 0 Non-capsid protein NP1 MORN PF02493.20 ORF50647 - 4.8e-11 41.9 12.2 1.4e-05 24.7 0.4 3.7 4 0 0 4 4 4 3 MORN repeat CytB6-F_Fe-S PF08802.10 ORF50343 - 0.43 10.6 3.6 2.7 8.1 0.3 2.1 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit NIF PF03031.18 ORF50035 - 8.6e-19 67.8 0.0 9.2e-19 67.7 0.0 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase STAG PF08514.11 ORF49857 - 0.073 13.0 0.2 0.077 12.9 0.2 1.2 1 0 0 1 1 1 0 STAG domain LEDGF PF11467.8 ORF49670 - 0.032 13.8 0.1 0.032 13.8 0.1 1.2 1 0 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) DUF257 PF03192.13 ORF49670 - 0.052 13.4 0.2 0.054 13.3 0.2 1.0 1 0 0 1 1 1 0 Pyrococcus protein of unknown function, DUF257 DUF1505 PF07403.11 ORF49476 - 0.085 13.0 1.4 0.097 12.9 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) DUF4995 PF16386.5 ORF49476 - 0.099 12.6 0.3 0.12 12.4 0.3 1.3 1 1 0 1 1 1 0 Domain of unknown function ABC2_membrane PF01061.24 ORF49366 - 0.038 13.4 2.9 0.05 13.0 2.7 1.3 1 1 0 1 1 1 0 ABC-2 type transporter zf_C2HC_14 PF18574.1 ORF49244 - 0.12 12.2 3.6 0.41 10.5 3.8 1.8 1 1 1 2 2 2 0 C2HC Zing finger domain IQ PF00612.27 ORF49053 - 0.00033 20.2 0.7 0.00056 19.5 0.7 1.4 1 0 0 1 1 1 1 IQ calmodulin-binding motif DUF3072 PF11272.8 ORF49053 - 0.086 12.7 2.0 0.32 10.9 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3072) PI3_PI4_kinase PF00454.27 ORF48798 - 1.6e-05 24.9 0.0 1.6e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase CttA_N PF18244.1 ORF48445 - 0.011 16.2 0.7 0.013 15.9 0.7 1.2 1 0 0 1 1 1 0 Cellulose-binding protein CttA N-terminal domain Macro PF01661.21 ORF48322 - 2.7e-16 59.7 0.0 2.9e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Macro domain DUF2759 PF10958.8 ORF48322 - 0.0082 15.8 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2759) DUF1430 PF07242.11 ORF47796 - 0.036 14.3 2.5 0.041 14.1 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) DUF5426 PF17473.2 ORF47796 - 0.11 12.8 3.8 0.13 12.6 3.4 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5426) FAP PF07174.11 ORF4769 - 0.32 10.4 10.7 0.31 10.4 10.7 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Porphyrn_cat_1 PF18206.1 ORF47570 - 0.13 12.9 1.4 0.17 12.5 1.4 1.2 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 DUF1188 PF06690.11 ORF47570 - 0.14 11.7 3.2 0.15 11.6 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) OSTbeta PF15048.6 ORF47337 - 0.13 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein DUF3945 PF13101.6 ORF47238 - 0.024 14.3 0.1 0.035 13.8 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3945) DUF1279 PF06916.13 ORF4695 - 0.26 11.9 1.4 0.28 11.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1279) DUF3810 PF12725.7 ORF4682 - 4.7 6.5 6.5 5.1 6.3 6.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) EVC2_like PF12297.8 ORF4682 - 9.7 4.7 6.1 10 4.7 6.1 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Phospholamban PF04272.14 ORF46607 - 1.3 8.6 4.9 2.7 7.5 4.9 1.6 1 1 0 1 1 1 0 Phospholamban DUF4666 PF15697.5 ORF46230 - 0.15 12.8 4.2 0.74 10.5 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4666) Ferric_reduct PF01794.19 ORF45532 - 2.8e-06 27.5 0.0 2.8e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Ferric reductase like transmembrane component GerA PF03323.13 ORF45532 - 0.052 12.0 0.3 0.058 11.9 0.3 1.0 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein TMEM154 PF15102.6 ORF45532 - 0.11 12.4 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 TMEM154 protein family Vir_act_alpha_C PF10400.9 ORF45473 - 0.1 13.3 2.5 3.5 8.4 0.1 2.0 1 1 1 2 2 2 0 Virulence activator alpha C-term RcpB PF16971.5 ORF45394 - 0.11 12.3 1.0 0.12 12.3 1.0 1.0 1 0 0 1 1 1 0 Rough colony protein B, tight adherence - tad - subunit Styelin PF17562.2 ORF45394 - 0.13 12.7 0.8 0.19 12.1 0.8 1.4 1 0 0 1 1 1 0 Styelin DUF4381 PF14316.6 ORF45292 - 0.047 13.9 0.3 0.051 13.8 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Herpes_LMP1 PF05297.11 ORF44900 - 0.02 14.1 2.2 0.02 14.1 2.2 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) PHO4 PF01384.20 ORF44900 - 0.13 11.3 0.6 0.13 11.3 0.6 1.1 1 0 0 1 1 1 0 Phosphate transporter family Peptidase_U4 PF03419.13 ORF44900 - 0.64 9.3 4.8 0.65 9.2 4.8 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Oxidored_q4 PF00507.19 ORF44575 - 0.083 13.1 8.4 0.1 12.8 8.4 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DUF5337 PF17272.2 ORF44575 - 0.61 10.0 2.6 0.53 10.1 0.4 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5337) HEPN_AbiA_CTD PF18732.1 ORF44477 - 0.042 13.8 0.0 0.048 13.6 0.0 1.0 1 0 0 1 1 1 0 HEPN like, Abia C-terminal domain DXP_reductoisom PF02670.16 ORF44477 - 0.11 13.3 0.0 0.12 13.1 0.0 1.0 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase CoA_binding_3 PF13727.6 ORF44221 - 1.4 8.9 4.4 1.5 8.8 4.4 1.0 1 0 0 1 1 1 0 CoA-binding domain Zn_Tnp_IS1595 PF12760.7 ORF43972 - 0.05 13.6 0.2 0.069 13.1 0.2 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DUF2891 PF11199.8 ORF43972 - 0.071 12.0 0.0 0.071 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2891) bPH_2 PF03703.14 ORF43965 - 0.15 12.3 0.2 0.66 10.2 0.1 1.8 1 1 1 2 2 2 0 Bacterial PH domain AvrLm4-7 PF18661.1 ORF43360 - 0.11 13.5 6.0 0.16 13.0 6.0 1.4 1 0 0 1 1 1 0 Avirulence Effector AvrLm4-7 TraI_2_C PF07515.11 ORF42891 - 0.095 12.6 0.4 0.1 12.5 0.4 1.2 1 1 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term DUF1580 PF07618.11 ORF42778 - 0.049 13.2 0.4 0.074 12.7 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1580) PCP PF02429.15 ORF4241 - 1.2e-14 54.9 0.5 1.4e-14 54.6 0.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF3404 PF11884.8 ORF4185 - 0.0025 17.1 0.2 0.0029 16.9 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3404) DUF373 PF04123.13 ORF41470 - 0.07 12.6 0.2 0.07 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) RCC1 PF00415.18 ORF4140 - 0.056 14.1 0.0 0.079 13.6 0.0 1.2 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat ArgJ PF01960.18 ORF41399 - 0.014 14.1 0.1 0.016 14.0 0.1 1.0 1 0 0 1 1 1 0 ArgJ family zf-3CxxC_2 PF17180.4 ORF41135 - 0.012 16.4 0.3 0.014 16.1 0.3 1.1 1 0 0 1 1 1 0 Zinc-binding domain BPD_transp_1 PF00528.22 ORF41010 - 1.3e-12 47.8 0.4 1.4e-12 47.8 0.4 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Sugar_tr PF00083.24 ORF40118 - 1e-06 27.9 0.0 1e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter DUF3884 PF13024.6 ORF40118 - 0.017 14.6 0.0 0.034 13.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3884) SymE_toxin PF08845.10 ORF40118 - 0.046 13.8 0.0 0.077 13.1 0.0 1.3 1 0 0 1 1 1 0 Toxin SymE, type I toxin-antitoxin system XPB_DRD PF18458.1 ORF40027 - 0.15 12.0 0.2 0.18 11.7 0.2 1.3 1 1 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain HTH_18 PF12833.7 ORF3992 - 9.7e-12 45.0 0.0 1.2e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF3992 - 0.00035 20.6 0.0 0.00071 19.6 0.0 1.6 1 1 1 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family GCS PF03074.16 ORF39858 - 2.5e-10 40.3 0.9 3e-10 40.0 0.9 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase EamA PF00892.20 ORF39682 - 0.0029 17.8 0.1 0.0035 17.5 0.1 1.1 1 0 0 1 1 1 1 EamA-like transporter family V_ATPase_I PF01496.19 ORF3966 - 6.4 4.6 10.1 6.4 4.5 10.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RNA_pol_Rpc4 PF05132.14 ORF3966 - 7.6 7.0 7.6 8.5 6.8 7.6 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF913 PF06025.12 ORF3966 - 7.9 5.3 7.7 7.8 5.4 7.7 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF3467 PF11950.8 ORF39601 - 0.1 12.8 0.9 0.12 12.6 0.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3467) adh_short PF00106.25 ORF39034 - 0.14 11.6 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 short chain dehydrogenase ACT PF01842.25 ORF38924 - 9e-09 35.0 0.0 1.3e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 ORF38924 - 0.0024 18.4 0.0 0.0032 18.0 0.0 1.3 1 1 0 1 1 1 1 ACT domain PI-TkoII_IV PF18714.1 ORF38924 - 0.013 15.0 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase II intein Domain IV ACT_6 PF13740.6 ORF38924 - 0.076 13.0 0.0 0.16 11.9 0.0 1.5 1 1 0 1 1 1 0 ACT domain DUF4041 PF13250.6 ORF38924 - 0.11 12.4 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) Ribosomal_L21e PF01157.18 ORF38924 - 0.18 11.7 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L21e DUF2870 PF11069.8 ORF38395 - 0.038 14.4 1.7 0.045 14.1 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2870) MGDG_synth PF06925.11 ORF38395 - 0.059 13.5 0.6 0.069 13.3 0.6 1.0 1 0 0 1 1 1 0 Monogalactosyldiacylglycerol (MGDG) synthase DUF2368 PF10166.9 ORF37501 - 0.0059 16.2 1.6 0.0068 16.0 1.6 1.1 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2368) MORN PF02493.20 ORF37072 - 2.1e-09 36.7 8.7 5.3e-06 26.0 0.4 3.0 3 0 0 3 3 3 2 MORN repeat SNAP PF14938.6 ORF36285 - 2.1e-16 60.2 4.3 2.2e-16 60.1 4.3 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP NSF PF02071.20 ORF36285 - 0.023 15.3 1.1 2.3 9.4 0.2 2.7 2 0 0 2 2 2 0 Aromatic-di-Alanine (AdAR) repeat Herpes_UL37_2 PF07413.11 ORF36167 - 0.0084 15.4 0.2 0.009 15.3 0.2 1.1 1 0 0 1 1 1 1 Betaherpesvirus immediate-early glycoprotein UL37 zf_C2HC_14 PF18574.1 ORF3556 - 0.12 12.2 3.6 0.41 10.5 3.8 1.8 1 1 1 2 2 2 0 C2HC Zing finger domain Beach PF02138.18 ORF34649 - 2.8e-08 33.5 0.3 3e-08 33.4 0.3 1.0 1 0 0 1 1 1 1 Beige/BEACH domain Phage_T4_Gp30_7 PF06919.11 ORF34593 - 0.035 14.3 0.0 0.036 14.2 0.0 1.1 1 0 0 1 1 1 0 Phage Gp30.7 protein zf-RING_10 PF16685.5 ORF3419 - 0.14 12.3 0.1 0.19 11.9 0.1 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 Toxin_23 PF08093.11 ORF34075 - 0.18 11.9 6.3 0.28 11.3 6.3 1.3 1 0 0 1 1 1 0 Magi 5 toxic peptide family Macro PF01661.21 ORF33335 - 2.9e-16 59.6 0.0 3.1e-16 59.5 0.0 1.0 1 0 0 1 1 1 1 Macro domain DUF2759 PF10958.8 ORF33335 - 0.0083 15.8 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2759) PCSK9_C1 PF18459.1 ORF33150 - 2.8 8.2 4.9 3.1 8.0 0.1 2.0 1 1 1 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Metallothio_2 PF01439.18 ORF32969 - 0.0076 17.1 0.9 0.0088 16.9 0.9 1.1 1 0 0 1 1 1 1 Metallothionein UCR_UQCRX_QCR9 PF05365.12 ORF32852 - 1.5e-11 44.1 0.3 1.9e-11 43.7 0.3 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like PPR PF01535.20 ORF32852 - 0.021 15.0 0.1 0.033 14.4 0.1 1.3 1 0 0 1 1 1 0 PPR repeat DUF1146 PF06612.11 ORF32852 - 0.098 12.7 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1146) RP1-2 PF12042.8 ORF32565 - 0.064 13.1 0.0 0.079 12.8 0.0 1.1 1 0 0 1 1 1 0 Tubuliform egg casing silk strands structural domain PTP_N PF12453.8 ORF32101 - 0.21 11.3 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase N terminal p47_phox_C PF08944.11 ORF31951 - 0.041 13.3 0.8 0.12 11.8 0.2 1.9 2 0 0 2 2 2 0 NADPH oxidase subunit p47Phox, C terminal domain ERGIC_N PF13850.6 ORF31833 - 0.054 13.8 0.5 0.061 13.7 0.5 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ZZ PF00569.17 ORF31778 - 0.53 10.1 3.0 0.36 10.7 0.7 1.8 2 0 0 2 2 2 0 Zinc finger, ZZ type DUF4460 PF14687.6 ORF31354 - 0.025 14.6 0.1 0.034 14.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) DUF1656 PF07869.12 ORF31119 - 0.057 13.4 0.1 0.18 11.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1656) FAP PF07174.11 ORF31092 - 0.32 10.4 10.7 0.31 10.4 10.7 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) TPR_MalT PF17874.1 ORF30886 - 0.049 13.0 0.0 0.055 12.8 0.0 1.0 1 0 0 1 1 1 0 MalT-like TPR region CbiD PF01888.17 ORF30758 - 0.25 10.6 0.0 0.26 10.5 0.0 1.0 1 0 0 1 1 1 0 CbiD DUF4639 PF15479.6 ORF30752 - 0.031 13.3 1.0 0.036 13.0 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4639) PRIMA1 PF16101.5 ORF30719 - 0.03 14.4 4.8 0.033 14.2 4.8 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 ORF30719 - 0.052 13.0 5.1 0.054 13.0 5.1 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 ORF30719 - 0.29 11.2 2.3 0.29 11.2 2.3 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator Sulfotransfer_2 PF03567.14 ORF30162 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family UCR_UQCRX_QCR9 PF05365.12 ORF3004 - 1.5e-11 44.1 0.3 1.9e-11 43.7 0.3 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like PPR PF01535.20 ORF3004 - 0.021 15.0 0.1 0.033 14.4 0.1 1.3 1 0 0 1 1 1 0 PPR repeat DUF1146 PF06612.11 ORF3004 - 0.098 12.7 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1146) Peptidase_M17_N PF02789.17 ORF28252 - 0.095 12.6 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Cytosol aminopeptidase family, N-terminal domain EF-hand_1 PF00036.32 ORF28222 - 5.7e-05 22.4 0.0 7.9e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF28222 - 0.00054 19.7 0.0 0.0008 19.1 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF28222 - 0.0022 17.4 0.2 0.0031 16.9 0.2 1.2 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF28222 - 0.0072 16.7 0.0 0.0075 16.7 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF28222 - 0.016 15.1 0.0 0.022 14.6 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair ABC_ATPase PF09818.9 ORF27691 - 0.1 11.4 0.0 0.1 11.4 0.0 1.0 1 0 0 1 1 1 0 Predicted ATPase of the ABC class Vps55 PF04133.14 ORF27214 - 0.047 13.7 1.7 0.063 13.2 1.7 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 55 EpuA PF11772.8 ORF27214 - 0.13 12.0 0.0 0.13 12.0 0.0 1.9 2 0 0 2 2 2 0 DNA-directed RNA polymerase subunit beta G-gamma PF00631.22 ORF26944 - 0.016 15.2 0.3 0.022 14.8 0.3 1.2 1 0 0 1 1 1 0 GGL domain zf-P11 PF03854.14 ORF26780 - 0.015 15.0 0.9 0.022 14.4 0.9 1.3 1 0 0 1 1 1 0 P-11 zinc finger zf-C4 PF00105.18 ORF26780 - 0.016 15.7 0.8 0.019 15.4 0.8 1.2 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) Peripla_BP_7 PF18610.1 ORF2670 - 0.029 14.5 0.1 0.032 14.3 0.1 1.2 1 0 0 1 1 1 0 Periplasmic binding protein domain MHCassoc_trimer PF08831.10 ORF2670 - 0.069 13.2 0.3 1.9 8.5 0.1 2.2 2 0 0 2 2 2 0 Class II MHC-associated invariant chain trimerisation domain DUF2457 PF10446.9 ORF26492 - 9 5.3 11.9 9.7 5.2 11.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) IL15 PF02372.15 ORF26207 - 0.057 13.4 0.0 0.068 13.2 0.0 1.0 1 0 0 1 1 1 0 Interleukin 15 DUF1117 PF06547.12 ORF26098 - 0.035 14.7 2.3 0.039 14.5 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) DUF4268 PF14088.6 ORF25929 - 0.076 12.9 0.1 0.084 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4268) pKID PF02173.17 ORF25874 - 0.017 14.6 1.5 0.034 13.6 1.5 1.5 1 0 0 1 1 1 0 pKID domain DUF1978 PF09321.10 ORF25874 - 0.073 12.4 0.3 0.076 12.3 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1978) VPS28 PF03997.12 ORF25860 - 0.079 12.6 0.0 0.083 12.6 0.0 1.1 1 0 0 1 1 1 0 VPS28 protein RcpB PF16971.5 ORF25514 - 0.11 12.3 1.0 0.12 12.3 1.0 1.0 1 0 0 1 1 1 0 Rough colony protein B, tight adherence - tad - subunit Styelin PF17562.2 ORF25514 - 0.13 12.7 0.8 0.19 12.1 0.8 1.4 1 0 0 1 1 1 0 Styelin PPR_2 PF13041.6 ORF25460 - 3.7e-12 46.3 0.0 4.5e-10 39.6 0.0 1.4 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF25460 - 2.6e-07 30.6 0.0 3.3e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF25460 - 3.1e-05 23.6 0.0 0.0023 17.6 0.0 2.6 3 0 0 3 3 3 1 PPR repeat PPR PF01535.20 ORF25460 - 5.2e-05 23.2 0.0 0.00032 20.7 0.0 2.2 3 0 0 3 3 3 1 PPR repeat Flu_B_NS1 PF02942.14 ORF25460 - 0.071 12.2 0.0 0.09 11.8 0.0 1.3 1 1 0 1 1 1 0 Influenza B non-structural protein (NS1) PPR_long PF17177.4 ORF25460 - 0.13 11.6 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP WIYLD PF10440.9 ORF24935 - 0.05 13.4 0.0 0.068 13.0 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-binding WIYLD domain EcoEI_R_C PF08463.10 ORF24667 - 0.1 12.7 2.6 0.13 12.4 2.6 1.2 1 0 0 1 1 1 0 EcoEI R protein C-terminal PIG-P PF08510.12 ORF2438 - 2.1e-06 27.7 1.2 2.1e-06 27.7 1.2 1.6 2 0 0 2 2 2 1 PIG-P DUF1648 PF07853.11 ORF2438 - 0.076 12.7 2.0 0.11 12.1 2.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1648) MLANA PF14991.6 ORF2438 - 0.11 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein melan-A NapE PF06796.11 ORF2438 - 1 8.9 6.9 0.31 10.6 2.6 2.1 1 1 1 2 2 2 0 Periplasmic nitrate reductase protein NapE ParBc PF02195.18 ORF24198 - 0.0036 17.6 0.1 0.004 17.4 0.1 1.1 1 0 0 1 1 1 1 ParB-like nuclease domain InvH PF04741.12 ORF24007 - 0.025 14.5 0.1 0.029 14.3 0.1 1.1 1 0 0 1 1 1 0 InvH outer membrane lipoprotein S_100 PF01023.19 ORF24007 - 0.044 13.5 0.1 0.067 12.9 0.1 1.3 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain DUF2897 PF11446.8 ORF24007 - 0.08 12.8 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) DUF3333 PF11812.8 ORF24007 - 0.089 13.0 0.1 0.093 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) MFS_1 PF07690.16 ORF23565 - 6.9e-05 21.9 1.7 7.5e-05 21.8 1.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1896 PF08989.10 ORF22935 - 0.16 12.1 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1896) Retrotran_gag_3 PF14244.6 ORF22935 - 0.22 11.4 0.2 0.34 10.7 0.2 1.5 1 1 0 1 1 1 0 gag-polypeptide of LTR copia-type DUF630 PF04783.12 ORF22935 - 0.3 11.3 2.2 0.3 11.3 0.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF630) Plasmodium_HRP PF05403.11 ORF22268 - 0.012 15.4 1.2 0.013 15.3 1.2 1.0 1 0 0 1 1 1 0 Plasmodium histidine-rich protein (HRPII/III) LAGLIDADG_WhiA PF14527.6 ORF22268 - 3.4 7.8 9.9 6.9 6.8 1.5 2.2 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain DUF4375 PF14300.6 ORF22268 - 8.1 6.7 7.2 22 5.3 6.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4375) MbtH PF03621.13 ORF2224 - 0.072 12.6 0.6 1.8 8.1 0.1 2.1 2 0 0 2 2 2 0 MbtH-like protein RapH_N PF18801.1 ORF21990 - 0.038 14.1 0.0 0.049 13.7 0.0 1.2 1 0 0 1 1 1 0 response regulator aspartate phosphatase H, N terminal DUF1279 PF06916.13 ORF21834 - 0.26 11.9 1.4 0.28 11.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1279) SIP1 PF04938.12 ORF21135 - 0.086 12.5 0.1 0.093 12.4 0.1 1.2 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) DUF4951 PF16309.5 ORF20973 - 0.099 12.7 0.8 0.13 12.3 0.8 1.3 1 0 0 1 1 1 0 Domian of unknown function (DUF4951) Tagatose_6_P_K PF08013.11 ORF20973 - 0.34 9.5 3.6 0.33 9.6 3.6 1.0 1 0 0 1 1 1 0 Tagatose 6 phosphate kinase Drf_GBD PF06371.13 ORF20973 - 1.1 8.8 5.6 1.1 8.8 5.6 1.1 1 0 0 1 1 1 0 Diaphanous GTPase-binding Domain Dynamitin PF04912.14 ORF20813 - 0.0095 15.3 2.5 0.01 15.2 2.5 1.0 1 0 0 1 1 1 1 Dynamitin OGFr_N PF04664.13 ORF20813 - 0.013 15.1 0.2 0.013 15.0 0.2 1.1 1 0 0 1 1 1 0 Opioid growth factor receptor (OGFr) conserved region TruB-C_2 PF09157.11 ORF20798 - 0.027 14.5 0.1 0.033 14.2 0.1 1.2 1 0 0 1 1 1 0 Pseudouridine synthase II TruB, C-terminal GPR15L PF15854.5 ORF19993 - 0.018 15.2 4.2 0.021 15.0 4.2 1.1 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 ARL6IP6 PF15062.6 ORF19397 - 0.61 10.3 3.0 6.2 7.0 0.0 2.1 1 1 1 2 2 2 0 Haemopoietic lineage transmembrane helix RskA PF10099.9 ORF1884 - 0.18 12.1 0.0 0.19 12.0 0.0 1.0 1 0 0 1 1 1 0 Anti-sigma-K factor rskA Fe_hyd_SSU PF02256.17 ORF18675 - 0.0076 16.3 0.1 0.012 15.7 0.1 1.2 1 0 0 1 1 1 1 Iron hydrogenase small subunit Ank_2 PF12796.7 ORF17665 - 0.014 15.9 0.0 0.016 15.8 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank PF00023.30 ORF17665 - 0.047 14.1 0.1 0.68 10.5 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeat Ank_3 PF13606.6 ORF17665 - 0.11 13.2 0.0 6.5 7.7 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeat Response_reg PF00072.24 ORF17106 - 0.04 14.1 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Response regulator receiver domain Imm50 PF15594.6 ORF16890 - 0.13 12.4 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 50 Fim-adh_lectin PF09222.10 ORF16890 - 0.15 11.5 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Fimbrial adhesin F17-AG, lectin domain Wx5_PLAF3D7 PF09688.10 ORF16791 - 0.0068 16.4 0.1 0.0082 16.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (Wx5_PLAF3D7) GlpM PF06942.12 ORF16557 - 0.026 14.9 6.7 0.03 14.7 6.7 1.1 1 0 0 1 1 1 0 GlpM protein Glyco_transf_54 PF04666.13 ORF16339 - 9.9e-06 24.6 0.0 1e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region TBCC_N PF16752.5 ORF16023 - 0.016 15.6 0.4 0.019 15.4 0.4 1.0 1 0 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain DUF5446 PF17522.2 ORF16023 - 0.061 13.5 2.9 1.2 9.4 0.1 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5446) PAP2 PF01569.21 ORF16016 - 0.27 11.0 0.6 0.34 10.7 0.6 1.1 1 0 0 1 1 1 0 PAP2 superfamily adh_short PF00106.25 ORF15813 - 0.0083 15.6 0.0 0.01 15.3 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF15813 - 0.012 15.2 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Psm4 PF17063.5 ORF14250 - 1.5 9.6 4.8 2 9.2 0.3 2.5 1 1 1 2 2 2 0 Phenol-soluble modulin alpha 4 peptide Sulfotransfer_2 PF03567.14 ORF13684 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family TraI_2_C PF07515.11 ORF13356 - 0.095 12.6 0.4 0.1 12.5 0.4 1.2 1 1 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term Strep_pep PF14404.6 ORF13195 - 0.0074 16.5 0.4 0.0098 16.1 0.4 1.2 1 0 0 1 1 1 1 Ribosomally synthesized peptide in Streptomyces species DUF5074 PF16819.5 ORF13195 - 0.028 14.5 2.5 0.23 11.5 0.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5074) ARL17 PF15840.5 ORF1295 - 0.25 11.7 0.9 0.6 10.5 0.4 1.8 1 1 1 2 2 2 0 ADP-ribosylation factor-like protein 17 CRR7 PF12095.8 ORF12949 - 0.11 13.0 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 DUF1439 PF07273.12 ORF12914 - 0.039 13.8 0.1 0.042 13.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1439) DUF3858 PF12970.7 ORF12453 - 0.13 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3858) Tubulin PF00091.25 ORF11786 - 0.015 15.5 0.9 0.015 15.5 0.9 1.0 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain Imm47 PF15573.6 ORF11786 - 0.041 13.4 2.0 0.042 13.4 2.0 1.0 1 0 0 1 1 1 0 Immunity protein 47 Ribosomal_L23 PF00276.20 ORF112578 - 3.2e-13 49.8 1.9 1.4e-12 47.8 1.9 1.8 1 1 0 1 1 1 1 Ribosomal protein L23 Sigma_reg_N PF13800.6 ORF112030 - 0.0065 16.7 0.9 0.0089 16.3 0.9 1.2 1 0 0 1 1 1 1 Sigma factor regulator N-terminal Sulfotransfer_2 PF03567.14 ORF111997 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family PAP2 PF01569.21 ORF111712 - 5.7e-08 32.6 3.7 6.7e-08 32.4 3.5 1.2 1 1 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 ORF111712 - 0.0015 18.3 2.1 0.0021 17.8 2.1 1.2 1 0 0 1 1 1 1 PAP2 superfamily Chordopox_A13L PF05961.11 ORF111684 - 0.0037 17.5 0.4 0.0055 16.9 0.3 1.4 1 1 0 1 1 1 1 Chordopoxvirus A13L protein Pkinase PF00069.25 ORF11037 - 2.3e-21 76.3 0.1 2.5e-21 76.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF11037 - 1.9e-10 40.5 0.0 2e-10 40.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF11037 - 0.011 14.7 0.0 0.021 13.7 0.0 1.3 1 1 0 1 1 1 0 Haspin like kinase domain Seadorna_VP7 PF07387.11 ORF11037 - 0.031 13.3 0.0 0.033 13.2 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 APH PF01636.23 ORF11037 - 0.042 13.8 0.0 0.042 13.8 0.0 1.0 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF11037 - 0.13 11.6 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Pox_A12 PF04651.13 ORF109833 - 0.13 12.3 2.5 0.14 12.2 2.5 1.0 1 0 0 1 1 1 0 Poxvirus A12 protein ScdA_N PF04405.14 ORF109447 - 0.074 12.7 0.3 0.11 12.2 0.3 1.2 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) ArsA_ATPase PF02374.15 ORF109086 - 0.33 10.1 1.6 0.37 9.9 1.6 1.0 1 0 0 1 1 1 0 Anion-transporting ATPase TMEM247 PF15444.6 ORF108838 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 zinc_ribbon_2 PF13240.6 ORF108454 - 0.077 12.7 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 zinc-ribbon domain CRT-like PF08627.10 ORF107652 - 0.13 11.2 0.2 0.13 11.2 0.2 1.0 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like ABC_membrane PF00664.23 ORF107567 - 2.3e-07 30.7 7.3 2.4e-07 30.7 7.3 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Varsurf_PPLC PF03490.13 ORF107443 - 0.098 12.6 0.7 0.12 12.4 0.4 1.4 1 1 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C FAM165 PF14981.6 ORF106789 - 5.2 6.9 7.1 0.54 10.1 0.3 2.3 1 1 1 2 2 2 0 FAM165 family Myb_DNA-bind_6 PF13921.6 ORF105690 - 0.034 14.4 0.1 0.06 13.6 0.0 1.5 1 1 1 2 2 2 0 Myb-like DNA-binding domain OppC_N PF12911.7 ORF105211 - 0.0037 17.2 0.1 0.26 11.3 0.0 2.1 2 0 0 2 2 2 2 N-terminal TM domain of oligopeptide transport permease C OppC_N PF12911.7 ORF105210 - 0.0037 17.2 0.1 0.26 11.3 0.0 2.1 2 0 0 2 2 2 2 N-terminal TM domain of oligopeptide transport permease C DUF3228 PF11539.8 ORF104731 - 5.3e-30 104.4 0.1 5.5e-30 104.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3228) Hist_deacetyl PF00850.19 ORF104478 - 4.7e-08 32.9 0.0 5.3e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Clat_adaptor_s PF01217.20 ORF104215 - 0.16 11.9 2.8 0.2 11.6 2.2 1.4 1 1 0 1 1 1 0 Clathrin adaptor complex small chain Herpes_UL37_2 PF07413.11 ORF104121 - 0.0084 15.4 0.2 0.009 15.3 0.2 1.1 1 0 0 1 1 1 1 Betaherpesvirus immediate-early glycoprotein UL37 P22_AR_C PF10548.9 ORF104017 - 0.067 13.4 0.4 0.086 13.0 0.4 1.1 1 0 0 1 1 1 0 P22AR C-terminal domain WBP-1 PF11669.8 ORF103652 - 0.41 11.3 1.7 0.48 11.1 1.7 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 DUF1700 PF08006.11 ORF103652 - 0.66 9.5 8.6 0.64 9.5 8.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Tmemb_9 PF05434.11 ORF103652 - 0.8 9.6 6.9 0.94 9.4 6.9 1.2 1 0 0 1 1 1 0 TMEM9 HATPase_c PF02518.26 ORF103594 - 0.01 16.3 0.1 0.017 15.6 0.1 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Phage_TAC_4 PF08748.11 ORF103594 - 0.035 14.4 0.0 0.039 14.3 0.0 1.0 1 0 0 1 1 1 0 Phage tail assembly chaperone M3 PF09213.10 ORF103555 - 0.15 10.7 0.0 0.15 10.7 0.0 1.0 1 0 0 1 1 1 0 M3 Tryp_alpha_amyl PF00234.22 ORF10335 - 0.016 15.7 1.2 0.018 15.5 1.2 1.1 1 0 0 1 1 1 0 Protease inhibitor/seed storage/LTP family Peptidase_C71 PF12386.8 ORF103332 - 0.17 11.5 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei TPX2 PF06886.11 ORF103173 - 1.1 9.5 14.6 0.68 10.2 12.2 1.8 1 1 0 1 1 1 0 Targeting protein for Xklp2 (TPX2) RF-1 PF00472.20 ORF103173 - 1.3 9.0 10.1 1.4 8.9 10.1 1.1 1 0 0 1 1 1 0 RF-1 domain ATP-synt_E PF05680.12 ORF103173 - 2.3 8.6 9.9 2.6 8.4 9.9 1.2 1 0 0 1 1 1 0 ATP synthase E chain DUF4342 PF14242.6 ORF103173 - 6.8 6.8 5.8 9.3 6.3 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) InvH PF04741.12 ORF103160 - 0.025 14.5 0.1 0.029 14.3 0.1 1.1 1 0 0 1 1 1 0 InvH outer membrane lipoprotein S_100 PF01023.19 ORF103160 - 0.044 13.5 0.1 0.067 12.9 0.1 1.3 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain DUF2897 PF11446.8 ORF103160 - 0.08 12.8 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) DUF3333 PF11812.8 ORF103160 - 0.089 13.0 0.1 0.093 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) Macro PF01661.21 ORF103067 - 2.7e-16 59.7 0.0 2.9e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 Macro domain DUF2759 PF10958.8 ORF103067 - 0.0082 15.8 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2759) Mit_KHE1 PF10173.9 ORF102289 - 1 9.4 3.3 1 9.4 3.3 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related RXT2_N PF08595.11 ORF102289 - 7.6 6.6 18.4 11 6.1 18.4 1.3 1 0 0 1 1 1 0 RXT2-like, N-terminal cNMP_binding PF00027.29 ORF100707 - 1.3e-05 25.1 0.0 1.5e-05 25.0 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain BChl_A PF02327.17 ORF100707 - 0.076 11.8 0.0 0.085 11.6 0.0 1.0 1 0 0 1 1 1 0 Bacteriochlorophyll A protein DUF1235 PF06822.12 ORF100681 - 0.046 13.0 0.1 0.051 12.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1235) efb-c PF12199.8 ORF100681 - 0.064 13.3 0.0 0.083 13.0 0.0 1.2 1 0 0 1 1 1 0 Extracellular fibrinogen binding protein C terminal DUF1682 PF07946.14 ORF100316 - 1.2 8.3 11.7 1.3 8.2 11.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) ESM4 PF15952.5 ORF100316 - 1.2 9.5 10.3 1.3 9.5 10.3 1.0 1 0 0 1 1 1 0 Enhancer of split M4 family MscS_TM PF12794.7 ORF100316 - 4.6 6.0 4.2 4.8 6.0 4.2 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Myb_DNA-bind_5 PF13873.6 ORF100033 - 0.066 13.3 0.0 0.09 12.9 0.0 1.2 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain DUF4819 PF16090.5 NODE_77105_length_205_cov_0.929412_g69164_i0forward_frame_1 - 0.064 13.3 0.0 0.07 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4819) Rubella_Capsid PF05750.11 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_1 - 0.79 9.3 7.8 0.85 9.2 7.8 1.0 1 0 0 1 1 1 0 Rubella capsid protein DUF3915 PF13054.6 NODE_77098_length_205_cov_0.935294_g69157_i0reverse_frame_1 - 0.1 12.6 0.6 0.1 12.6 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DIE2_ALG10 PF04922.12 NODE_77094_length_205_cov_0.935294_g69153_i0forward_frame_1 - 0.018 14.4 0.2 0.021 14.1 0.2 1.1 1 0 0 1 1 1 0 DIE2/ALG10 family Calsarcin PF05556.11 NODE_77093_length_205_cov_0.941176_g69152_i0reverse_frame_1 - 0.03 13.9 0.1 0.031 13.8 0.1 1.0 1 0 0 1 1 1 0 Calcineurin-binding protein (Calsarcin) Tir_receptor_N PF07490.11 NODE_77091_length_205_cov_0.941176_g69150_i0forward_frame_1 - 0.19 11.5 0.0 0.21 11.4 0.0 1.0 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) N-terminus RCDG1 PF15725.5 NODE_77084_length_205_cov_0.941176_g69143_i0reverse_frame_1 - 0.024 15.0 2.1 0.024 15.0 2.1 1.4 1 1 0 1 1 1 0 Renal cancer differentiation gene 1 protein Asp_decarbox PF02261.16 NODE_77084_length_205_cov_0.941176_g69143_i0forward_frame_1 - 0.12 12.4 0.1 0.15 12.0 0.1 1.2 1 0 0 1 1 1 0 Aspartate decarboxylase Leader_CPA1 PF08252.11 NODE_77081_length_205_cov_0.941176_g69140_i0forward_frame_1 - 0.3 10.5 3.6 8.9 5.8 0.3 2.3 2 0 0 2 2 2 0 arg-2/CPA1 leader peptide DUF3903 PF13043.6 NODE_77075_length_205_cov_0.941176_g69134_i0forward_frame_1 - 0.055 13.2 0.2 0.094 12.5 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) SR-25 PF10500.9 NODE_77073_length_205_cov_0.941176_g69132_i0reverse_frame_1 - 0.25 11.0 17.7 0.27 10.8 17.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CCDC106 PF15794.5 NODE_77073_length_205_cov_0.941176_g69132_i0reverse_frame_1 - 0.74 9.5 7.2 0.78 9.4 7.2 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 CYYR1 PF10873.8 NODE_77073_length_205_cov_0.941176_g69132_i0forward_frame_1 - 0.57 10.6 11.4 0.63 10.5 11.4 1.1 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 Ntox14 PF15522.6 NODE_77070_length_205_cov_0.976471_g69129_i0reverse_frame_1 - 0.012 15.0 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 0 Novel toxin 14 Spc42p PF11544.8 NODE_77066_length_205_cov_1.011765_g69125_i0reverse_frame_1 - 0.0033 17.4 1.6 0.0039 17.2 1.6 1.2 1 0 0 1 1 1 1 Spindle pole body component Spc42p YabA PF06156.13 NODE_77066_length_205_cov_1.011765_g69125_i0reverse_frame_1 - 0.019 15.6 0.6 0.022 15.4 0.6 1.1 1 0 0 1 1 1 0 Initiation control protein YabA DUF4834 PF16118.5 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 0.022 15.7 2.1 0.025 15.6 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Sigma_reg_N PF13800.6 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 0.046 14.0 5.6 0.051 13.9 5.6 1.3 1 0 0 1 1 1 0 Sigma factor regulator N-terminal NB PF04159.13 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 0.089 12.8 7.2 0.11 12.5 7.2 1.1 1 0 0 1 1 1 0 NB glycoprotein Baculo_11_kDa PF06143.11 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 0.34 10.5 5.2 0.49 10.0 5.2 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family DUF1459 PF07312.11 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 0.91 9.8 6.3 1.5 9.1 6.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1459) Bunya_G2 PF03563.13 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 6.2 6.0 10.4 6.4 5.9 10.4 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 MSC PF09402.10 NODE_77054_length_205_cov_1.088235_g69113_i0forward_frame_1 - 0.16 11.4 2.2 0.16 11.4 2.2 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain UCR_UQCRX_QCR9 PF05365.12 NODE_77049_length_205_cov_1.141176_g69108_i0forward_frame_1 - 0.1 12.5 0.5 0.15 12.0 0.5 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like UPF0565 PF10561.9 NODE_77041_length_205_cov_1.170588_g69100_i0reverse_frame_1 - 0.018 14.3 0.1 0.018 14.3 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Reprolysin PF01421.19 NODE_77037_length_205_cov_1.176471_g69096_i0reverse_frame_1 - 0.12 12.2 0.1 0.13 12.2 0.1 1.0 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease HEAT PF02985.22 NODE_77036_length_205_cov_1.176471_g69095_i0reverse_frame_1 - 0.05 13.9 0.0 0.071 13.4 0.0 1.3 1 0 0 1 1 1 0 HEAT repeat Ribosomal_L20 PF00453.18 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.0019 18.3 0.5 0.0021 18.1 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L20 DUF4168 PF13767.6 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.0027 18.8 1.1 0.0033 18.6 1.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4168) Hemocyanin_M PF00372.19 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.036 13.2 0.8 0.04 13.1 0.8 1.0 1 0 0 1 1 1 0 Hemocyanin, copper containing domain GCS PF03074.16 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.044 13.2 1.8 0.047 13.1 1.8 1.0 1 0 0 1 1 1 0 Glutamate-cysteine ligase Tox-REase-3 PF15647.6 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.048 13.9 0.6 0.057 13.7 0.6 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 3 Nbl1_Borealin_N PF10444.9 NODE_77027_length_205_cov_1.276471_g69086_i0reverse_frame_1 - 0.077 12.7 0.1 0.1 12.2 0.1 1.2 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal DNA_pol3_a_NI PF14480.6 NODE_77024_length_205_cov_1.300000_g69083_i0reverse_frame_1 - 0.039 13.9 2.2 0.72 9.9 0.6 2.2 1 1 1 2 2 2 0 DNA polymerase III polC-type N-terminus I DUF4806 PF16064.5 NODE_77023_length_205_cov_1.305882_g69082_i0reverse_frame_1 - 0.13 12.6 0.1 0.15 12.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4806) TPR_MalT PF17874.1 NODE_77022_length_205_cov_1.305882_g69081_i0forward_frame_1 - 0.15 11.4 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 MalT-like TPR region APS_kinase PF01583.20 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 6.8e-07 29.3 0.1 8.6e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_18 PF13238.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.00013 22.5 0.1 0.00017 22.2 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.0027 18.1 0.1 0.003 18.0 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.0058 16.8 0.0 0.007 16.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.01 15.1 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.016 15.5 0.2 0.021 15.1 0.2 1.1 1 0 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.019 14.7 0.2 0.024 14.3 0.2 1.1 1 0 0 1 1 1 0 Thymidylate kinase RNA_helicase PF00910.22 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.019 15.3 0.0 0.025 15.0 0.0 1.2 1 0 0 1 1 1 0 RNA helicase AAA_24 PF13479.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.029 14.1 0.1 0.034 13.9 0.1 1.1 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.033 14.7 0.1 0.039 14.5 0.1 1.1 1 0 0 1 1 1 0 ABC transporter AAA_17 PF13207.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.033 14.6 0.1 0.043 14.3 0.1 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.035 14.0 0.0 0.035 14.0 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase PRK PF00485.18 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.046 13.5 0.0 0.061 13.1 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NTPase_1 PF03266.15 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.074 13.0 0.2 0.087 12.7 0.2 1.1 1 0 0 1 1 1 0 NTPase NB-ARC PF00931.22 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.085 12.0 0.0 0.098 11.8 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_28 PF13521.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.099 12.9 0.5 0.12 12.6 0.5 1.1 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.11 12.2 0.1 0.18 11.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain TsaE PF02367.17 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.13 12.3 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF3865 PF12981.7 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.13 12.1 0.0 0.15 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3865) Arf PF00025.21 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.13 11.7 0.1 0.14 11.6 0.1 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family AAA_5 PF07728.14 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.14 12.2 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Herpes_Helicase PF02689.14 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.15 9.9 0.1 0.15 10.0 0.1 1.0 1 0 0 1 1 1 0 Helicase AAA_30 PF13604.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.2 11.4 0.1 0.21 11.3 0.1 1.1 1 0 0 1 1 1 0 AAA domain FeS_assembly_P PF01883.19 NODE_77014_length_205_cov_1.341176_g69073_i0reverse_frame_1 - 0.16 12.1 0.2 0.23 11.6 0.2 1.2 1 0 0 1 1 1 0 Iron-sulfur cluster assembly protein ArAE_1_C PF11728.8 NODE_77005_length_205_cov_1.388235_g69064_i0forward_frame_1 - 0.099 12.6 0.3 0.13 12.3 0.3 1.0 1 0 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain NuDC PF16273.5 NODE_77002_length_205_cov_1.394118_g69061_i0forward_frame_1 - 0.052 14.1 4.9 0.085 13.4 4.9 1.4 1 1 0 1 1 1 0 Nuclear distribution C domain Borrelia_P13 PF05628.12 NODE_76988_length_205_cov_1.405882_g69047_i0forward_frame_1 - 0.018 15.0 0.1 0.019 14.9 0.1 1.1 1 0 0 1 1 1 0 Borrelia membrane protein P13 Cyt_bd_oxida_II PF02322.15 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.0061 16.0 0.8 0.0062 15.9 0.8 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II 4HB_MCP_1 PF12729.7 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.028 14.0 0.3 0.035 13.6 0.3 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction TMEM141 PF15110.6 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.044 14.4 0.8 0.051 14.1 0.8 1.1 1 0 0 1 1 1 0 TMEM141 protein family Phage_holin_8 PF16931.5 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.045 13.7 0.5 0.049 13.6 0.5 1.1 1 0 0 1 1 1 0 Putative phage holin Shisa PF13908.6 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.15 12.3 1.3 0.16 12.2 1.3 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Wzy_C PF04932.15 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.54 9.9 3.0 0.59 9.7 3.0 1.0 1 0 0 1 1 1 0 O-Antigen ligase Orf78 PF06024.12 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.89 9.9 7.3 0.083 13.2 2.2 1.7 1 1 1 2 2 2 0 Orf78 (ac78) DEP PF00610.21 NODE_76985_length_205_cov_1.411765_g69044_i0reverse_frame_1 - 0.18 11.9 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) DoxX PF07681.12 NODE_76974_length_205_cov_1.411765_g69033_i0reverse_frame_1 - 0.0008 20.0 0.2 0.00087 19.8 0.2 1.1 1 0 0 1 1 1 1 DoxX TSKS PF15358.6 NODE_76964_length_205_cov_1.476471_g69023_i0reverse_frame_1 - 0.032 12.6 0.0 0.033 12.6 0.0 1.0 1 0 0 1 1 1 0 Testis-specific serine kinase substrate UPF0254 PF06787.11 NODE_76964_length_205_cov_1.476471_g69023_i0reverse_frame_1 - 0.048 13.4 0.0 0.055 13.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) LIN52 PF10044.9 NODE_76964_length_205_cov_1.476471_g69023_i0reverse_frame_1 - 0.061 14.0 0.0 0.061 14.0 0.0 1.1 1 0 0 1 1 1 0 Retinal tissue protein Fe_hyd_SSU PF02256.17 NODE_76964_length_205_cov_1.476471_g69023_i0reverse_frame_1 - 0.11 12.6 0.3 0.17 12.0 0.3 1.5 1 1 0 1 1 1 0 Iron hydrogenase small subunit TTL PF03133.15 NODE_76952_length_205_cov_1.523529_g69011_i0reverse_frame_1 - 1.1e-05 24.8 0.0 1.2e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family DUF4722 PF15849.5 NODE_76948_length_205_cov_1.547059_g69007_i0reverse_frame_1 - 0.16 11.7 0.4 0.22 11.2 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4722) CYSTM PF12734.7 NODE_76948_length_205_cov_1.547059_g69007_i0forward_frame_1 - 3.5 8.0 14.5 4.7 7.6 14.5 1.4 1 1 0 1 1 1 0 Cysteine-rich TM module stress tolerance DUF3438 PF11920.8 NODE_76947_length_205_cov_1.552941_g69006_i0forward_frame_1 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) T3RM_EcoP15I_C PF18273.1 NODE_76940_length_205_cov_1.582353_g68999_i0reverse_frame_1 - 0.047 14.0 0.3 0.085 13.2 0.1 1.5 1 1 1 2 2 2 0 Type III R-M EcoP15I C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks354.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks354.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks354.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks354.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1010 PF06231.11 NODE_76921_length_205_cov_1.770588_g68980_i0forward_frame_1 - 0.04 14.4 2.8 0.049 14.2 2.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) DUF1320 PF07030.12 NODE_76917_length_205_cov_1.805882_g68976_i0forward_frame_1 - 0.12 12.5 0.2 0.14 12.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1320) Ndc1_Nup PF09531.10 NODE_76916_length_205_cov_1.805882_g68975_i0reverse_frame_1 - 1.2 7.7 5.5 1.3 7.6 5.5 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup GLYCAM-1 PF05242.11 NODE_76913_length_205_cov_1.823529_g68972_i0reverse_frame_1 - 0.028 14.6 1.8 0.03 14.4 1.8 1.1 1 0 0 1 1 1 0 Glycosylation-dependent cell adhesion molecule 1 (GlyCAM-1) GerPB PF10803.8 NODE_76909_length_205_cov_1.876471_g68968_i0forward_frame_1 - 0.041 14.0 2.8 0.052 13.6 2.8 1.4 1 0 0 1 1 1 0 Spore germination GerPB DivIC PF04977.15 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.0032 17.2 11.7 0.033 14.0 2.3 2.1 1 1 1 2 2 2 2 Septum formation initiator bZIP_1 PF00170.21 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.0055 16.8 3.0 0.0055 16.8 3.0 1.8 1 1 1 2 2 2 2 bZIP transcription factor bZIP_2 PF07716.15 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.013 15.6 1.1 0.013 15.6 1.1 2.0 1 1 2 3 3 3 0 Basic region leucine zipper HALZ PF02183.18 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.02 15.1 3.2 0.02 15.1 3.2 2.1 2 0 0 2 2 2 0 Homeobox associated leucine zipper Csm1_N PF18504.1 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.043 14.2 8.8 0.037 14.4 6.8 1.8 1 1 1 2 2 2 0 Csm1 N-terminal domain RTBV_P46 PF06216.11 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.085 11.7 0.7 0.076 11.9 0.7 1.0 1 0 0 1 1 1 0 Rice tungro bacilliform virus P46 protein JAKMIP_CC3 PF16034.5 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.12 12.4 8.8 0.12 12.3 8.8 1.0 1 0 0 1 1 1 0 JAKMIP CC3 domain DUF3450 PF11932.8 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.51 9.6 8.5 0.51 9.6 8.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) U71 PF17474.2 NODE_76896_length_205_cov_2.017647_g68955_i0reverse_frame_1 - 0.065 13.2 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 Tegument protein UL11 homolog DUF2079 PF09852.9 NODE_76891_length_205_cov_2.076471_g68950_i0reverse_frame_1 - 0.081 11.8 1.4 0.082 11.7 1.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) DUF1378 PF07125.11 NODE_76889_length_205_cov_2.094118_g68948_i0forward_frame_1 - 0.093 12.9 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) Hormone_6 PF00236.18 NODE_76868_length_205_cov_2.511765_g68927_i0reverse_frame_1 - 0.022 14.7 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Glycoprotein hormone DUF5549 PF17703.1 NODE_76856_length_205_cov_2.852941_g68915_i0reverse_frame_1 - 7.7 6.1 7.3 7.6 6.1 7.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) HemY_N PF07219.13 NODE_76837_length_205_cov_14.211765_g68896_i0forward_frame_1 - 0.1 12.8 0.2 0.12 12.6 0.2 1.1 1 0 0 1 1 1 0 HemY protein N-terminus Histone_HNS PF00816.21 NODE_76834_length_205_cov_19.652941_g68893_i0forward_frame_1 - 0.18 12.6 0.4 0.19 12.6 0.4 1.2 1 0 0 1 1 1 0 H-NS histone family PgaD PF13994.6 NODE_76832_length_205_cov_23.417647_g68891_i0forward_frame_1 - 0.1 12.6 1.4 0.11 12.5 1.4 1.0 1 0 0 1 1 1 0 PgaD-like protein EF-hand_13 PF17958.1 NODE_76830_length_205_cov_26.658824_g68889_i0reverse_frame_1 - 0.04 13.7 0.1 0.055 13.3 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain Peptidase_S49_N PF08496.10 NODE_76826_length_205_cov_35.888235_g68885_i0forward_frame_1 - 0.26 11.3 3.0 0.29 11.2 3.0 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Tombus_P33 PF08500.10 NODE_76825_length_205_cov_36.264706_g68884_i0reverse_frame_1 - 0.091 12.7 0.6 0.17 11.8 0.1 1.7 1 1 1 2 2 2 0 Tombusvirus p33 DUF2628 PF10947.8 NODE_76823_length_205_cov_36.935294_g68882_i0reverse_frame_1 - 0.37 11.2 3.3 0.47 10.8 3.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Pannexin_like PF12534.8 NODE_76820_length_205_cov_38.511765_g68879_i0reverse_frame_1 - 0.053 12.6 0.6 0.064 12.3 0.6 1.0 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 Myco_arth_vir_N PF09610.10 NODE_76819_length_205_cov_38.770588_g68878_i0forward_frame_1 - 8.7 6.5 10.2 14 5.9 10.2 1.3 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) Curto_V2 PF07325.11 NODE_76818_length_205_cov_39.058824_g68877_i0reverse_frame_1 - 0.026 14.4 0.3 0.027 14.4 0.3 1.1 1 0 0 1 1 1 0 Curtovirus V2 protein Orthoreo_P17 PF07272.11 NODE_76818_length_205_cov_39.058824_g68877_i0reverse_frame_1 - 0.11 12.5 0.1 0.12 12.4 0.1 1.0 1 0 0 1 1 1 0 Orthoreovirus P17 protein rhaM PF05336.13 NODE_76816_length_205_cov_42.341176_g68875_i0reverse_frame_1 - 0.0057 16.7 0.8 0.0066 16.5 0.8 1.3 1 1 0 1 1 1 1 L-rhamnose mutarotase UL17 PF17640.2 NODE_76813_length_205_cov_43.729412_g68872_i0reverse_frame_1 - 0.097 12.7 0.0 0.11 12.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized UL17 zf-C4_Topoisom PF01396.19 NODE_76797_length_205_cov_58.676471_g68856_i0reverse_frame_1 - 0.16 11.8 0.8 0.16 11.8 0.8 1.5 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DUF5538 PF17692.1 NODE_76789_length_205_cov_89.788235_g68848_i0reverse_frame_1 - 0.012 15.6 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) YidD PF01809.18 NODE_76780_length_205_cov_117.370588_g68839_i0reverse_frame_1 - 0.074 13.0 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor Collagen PF01391.18 NODE_76768_length_205_cov_228.005882_g68827_i0forward_frame_1 - 0.05 13.4 0.1 0.099 12.4 0.1 1.4 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) Adipogenin PF15202.6 NODE_76765_length_205_cov_250.147059_g68824_i0reverse_frame_1 - 1.5 8.9 6.6 1.5 8.9 6.6 1.2 1 0 0 1 1 1 0 Adipogenin MAP17 PF15807.5 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_1 - 1.6 9.0 5.7 1.9 8.7 5.7 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Peptidase_S49_N PF08496.10 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_1 - 2.1 8.4 7.6 2.3 8.3 7.6 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Cytochrome-c551 PF10643.9 NODE_76763_length_205_cov_315.900000_g68822_i0forward_frame_1 - 1.1 8.8 4.0 1.2 8.7 4.0 1.0 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 Epiglycanin_C PF14654.6 NODE_76755_length_206_cov_0.830409_g68814_i0forward_frame_1 - 0.078 13.0 0.3 0.081 13.0 0.3 1.2 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region TMEMspv1-c74-12 PF11044.8 NODE_76754_length_206_cov_0.865497_g68813_i0reverse_frame_1 - 0.029 14.3 0.8 0.029 14.3 0.8 1.7 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein PTCB-BRCT PF12738.7 NODE_76749_length_206_cov_0.929825_g68808_i0reverse_frame_1 - 0.099 12.6 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 twin BRCT domain PsaM PF07465.13 NODE_76748_length_206_cov_0.929825_g68807_i0forward_frame_1 - 0.022 14.5 0.5 0.028 14.1 0.5 1.2 1 0 0 1 1 1 0 Photosystem I protein M (PsaM) TRM PF02005.16 NODE_76743_length_206_cov_0.935673_g68802_i0forward_frame_1 - 0.14 11.3 0.1 0.16 11.1 0.1 1.0 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase SR-25 PF10500.9 NODE_76741_length_206_cov_0.935673_g68800_i0forward_frame_1 - 1.5 8.4 9.5 1.5 8.4 9.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Umbravirus_LDM PF04817.12 NODE_76737_length_206_cov_0.935673_g68796_i0reverse_frame_1 - 0.025 13.9 0.1 0.026 13.9 0.1 1.1 1 0 0 1 1 1 0 Umbravirus long distance movement (LDM) family DUF4246 PF14033.6 NODE_76732_length_206_cov_0.935673_g68791_i0forward_frame_1 - 0.22 10.6 0.0 0.24 10.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4246) DUF575 PF04746.12 NODE_76731_length_206_cov_0.935673_g68790_i0reverse_frame_1 - 0.028 14.7 0.6 0.035 14.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF575) EMI PF07546.13 NODE_76730_length_206_cov_0.935673_g68789_i0forward_frame_1 - 0.14 12.9 2.6 6.4 7.6 0.4 2.1 1 1 1 2 2 2 0 EMI domain DUF1360 PF07098.11 NODE_76718_length_206_cov_1.011696_g68777_i0reverse_frame_1 - 0.19 11.7 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) Ribosomal_L11_N PF03946.14 NODE_76715_length_206_cov_1.029240_g68774_i0forward_frame_1 - 0.16 11.8 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11, N-terminal domain Nas2_N PF18265.1 NODE_76712_length_206_cov_1.046784_g68771_i0forward_frame_1 - 0.17 11.8 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Nas2 N_terminal domain DUF2341 PF10102.9 NODE_76701_length_206_cov_1.087719_g68760_i0forward_frame_1 - 0.078 13.6 1.1 0.12 13.0 1.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF2341) Lustrin_cystein PF14625.6 NODE_76699_length_206_cov_1.087719_g68758_i0reverse_frame_1 - 0.58 10.6 10.1 34 4.9 10.1 2.6 1 1 0 1 1 1 0 Lustrin, cysteine-rich repeated domain KCH PF16944.5 NODE_76693_length_206_cov_1.111111_g68752_i0reverse_frame_1 - 0.012 15.4 2.7 0.013 15.3 2.7 1.1 1 0 0 1 1 1 0 Fungal potassium channel DUF4231 PF14015.6 NODE_76693_length_206_cov_1.111111_g68752_i0forward_frame_1 - 3.5 8.2 5.6 4.4 7.8 5.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) YrhC PF14143.6 NODE_76693_length_206_cov_1.111111_g68752_i0forward_frame_1 - 5 7.3 7.5 37 4.5 7.5 1.9 1 1 0 1 1 1 0 YrhC-like protein IMS_C PF11799.8 NODE_76686_length_206_cov_1.163743_g68745_i0forward_frame_1 - 0.0024 18.6 0.2 0.0027 18.4 0.2 1.1 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain GYR PF02756.14 NODE_76686_length_206_cov_1.163743_g68745_i0forward_frame_1 - 0.041 13.6 0.7 0.041 13.6 0.7 2.1 2 0 0 2 2 2 0 GYR motif U3_assoc_6 PF08640.11 NODE_76686_length_206_cov_1.163743_g68745_i0forward_frame_1 - 0.13 12.3 2.8 0.52 10.4 0.3 2.0 1 1 1 2 2 2 0 U3 small nucleolar RNA-associated protein 6 Polo_box_2 PF18531.1 NODE_76684_length_206_cov_1.163743_g68743_i0reverse_frame_1 - 0.056 13.6 0.1 0.061 13.4 0.1 1.1 1 0 0 1 1 1 0 Polo box domain Pox_TAP PF03355.14 NODE_76680_length_206_cov_1.169591_g68739_i0forward_frame_1 - 0.019 14.5 0.5 0.02 14.5 0.5 1.1 1 0 0 1 1 1 0 Viral Trans-Activator Protein CnrY PF17524.2 NODE_76673_length_206_cov_1.204678_g68732_i0reverse_frame_1 - 0.1 12.8 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Anti-sigma factor CnrY NERD PF08378.11 NODE_76672_length_206_cov_1.204678_g68731_i0forward_frame_1 - 0.2 12.2 0.0 0.2 12.1 0.0 1.2 1 0 0 1 1 1 0 Nuclease-related domain zf-A20 PF01754.16 NODE_76667_length_206_cov_1.228070_g68726_i0forward_frame_1 - 0.028 14.4 1.8 0.048 13.6 1.8 1.4 1 0 0 1 1 1 0 A20-like zinc finger fn3_PAP PF17808.1 NODE_76660_length_206_cov_1.298246_g68719_i0reverse_frame_1 - 0.096 12.8 1.1 0.1 12.7 1.1 1.1 1 0 0 1 1 1 0 Fn3-like domain from Purple Acid Phosphatase DNA_methylase PF00145.17 NODE_76651_length_206_cov_1.368421_g68710_i0reverse_frame_1 - 3e-12 46.5 0.0 3.5e-12 46.3 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase CHDNT PF08073.12 NODE_76645_length_206_cov_1.380117_g68704_i0forward_frame_1 - 0.057 13.4 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 CHDNT (NUC034) domain KNTase_C PF07827.11 NODE_76634_length_206_cov_1.403509_g68693_i0reverse_frame_1 - 0.15 11.9 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 KNTase C-terminal domain Presenilin PF01080.17 NODE_76630_length_206_cov_1.403509_g68689_i0reverse_frame_1 - 3.8 6.2 9.7 4.1 6.1 9.7 1.0 1 0 0 1 1 1 0 Presenilin Prim_Zn_Ribbon PF08273.12 NODE_76626_length_206_cov_1.403509_g68685_i0forward_frame_1 - 1.8 8.9 14.2 0.17 12.2 5.6 2.4 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase Axin_b-cat_bind PF08833.10 NODE_76615_length_206_cov_1.508772_g68674_i0forward_frame_1 - 0.029 14.5 0.1 0.043 13.9 0.1 1.2 1 0 0 1 1 1 0 Axin beta-catenin binding domain Csm1_N PF18504.1 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.0012 19.1 3.2 0.0018 18.6 3.2 1.3 1 0 0 1 1 1 1 Csm1 N-terminal domain CCDC92 PF14916.6 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.0033 17.2 2.3 0.005 16.6 1.7 1.9 1 1 0 1 1 1 1 Coiled-coil domain of unknown function Leu_zip PF15294.6 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.01 15.3 2.4 0.012 15.2 2.4 1.0 1 0 0 1 1 1 0 Leucine zipper KASH_CCD PF14662.6 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.014 15.2 1.8 0.015 15.1 1.8 1.0 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH Lebercilin PF15619.6 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.023 14.4 4.4 0.032 13.9 4.4 1.3 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease Pentaxin PF00354.17 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.033 13.9 0.6 0.035 13.8 0.6 1.0 1 0 0 1 1 1 0 Pentaxin family motB PF17613.2 NODE_76599_length_206_cov_1.584795_g68658_i0forward_frame_1 - 0.013 15.4 0.1 0.014 15.3 0.1 1.0 1 0 0 1 1 1 0 Modifier of transcription Muted PF14942.6 NODE_76599_length_206_cov_1.584795_g68658_i0forward_frame_1 - 0.024 15.0 1.2 0.024 15.0 1.2 1.0 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein COX6C PF02937.15 NODE_76593_length_206_cov_1.625731_g68652_i0reverse_frame_1 - 0.12 12.5 0.2 0.24 11.6 0.1 1.6 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VIc HHH_5 PF14520.6 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 2e-17 63.5 0.3 2.3e-17 63.3 0.3 1.1 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH PF00633.23 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 1.4e-08 34.2 1.0 0.00059 19.6 0.2 2.2 2 0 0 2 2 2 2 Helix-hairpin-helix motif IMS_HHH PF11798.8 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.00034 20.8 0.1 0.0069 16.7 0.0 2.2 2 0 0 2 2 2 1 IMS family HHH motif Transposase_20 PF02371.16 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.00052 20.3 0.0 0.062 13.6 0.0 2.1 2 0 0 2 2 2 1 Transposase IS116/IS110/IS902 family HHH_3 PF12836.7 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.00086 19.5 0.2 0.37 11.1 0.0 2.2 1 1 0 2 2 2 2 Helix-hairpin-helix motif HHH_8 PF14716.6 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.0011 19.3 0.1 0.063 13.7 0.0 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.0022 18.0 0.0 1.1 9.4 0.0 2.1 1 1 1 2 2 2 2 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.0071 16.9 0.2 0.34 11.6 0.0 2.1 1 1 1 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold LcrG PF07216.12 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.052 13.5 0.1 0.076 12.9 0.0 1.3 2 0 0 2 2 2 0 LcrG protein Cdd1 PF11731.8 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.095 13.0 0.0 0.52 10.6 0.0 1.9 2 0 0 2 2 2 0 Pathogenicity locus cNMP_binding PF00027.29 NODE_76589_length_206_cov_1.637427_g68648_i0reverse_frame_1 - 0.012 15.6 0.0 0.029 14.4 0.0 1.6 1 1 1 2 2 2 0 Cyclic nucleotide-binding domain DUF3367 PF11847.8 NODE_76586_length_206_cov_1.649123_g68645_i0reverse_frame_1 - 0.077 10.8 0.1 0.087 10.7 0.1 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase DUF3721 PF12518.8 NODE_76586_length_206_cov_1.649123_g68645_i0reverse_frame_1 - 0.17 11.7 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF3864 PF12980.7 NODE_76583_length_206_cov_1.695906_g68642_i0forward_frame_1 - 0.02 15.2 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3864) Mito_morph_reg PF14972.6 NODE_76583_length_206_cov_1.695906_g68642_i0forward_frame_1 - 0.073 12.7 0.1 0.08 12.5 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator RolB_RolC PF02027.17 NODE_76579_length_206_cov_1.719298_g68638_i0forward_frame_1 - 0.043 13.5 0.0 0.047 13.3 0.0 1.0 1 0 0 1 1 1 0 RolB/RolC glucosidase family LRR_12 PF18837.1 NODE_76575_length_206_cov_1.760234_g68634_i0forward_frame_1 - 0.038 13.6 0.0 0.073 12.7 0.0 1.5 1 0 0 1 1 1 0 Leucine-rich repeat TMEM125 PF15109.6 NODE_76568_length_206_cov_1.824561_g68627_i0reverse_frame_1 - 0.055 13.8 0.4 0.064 13.6 0.4 1.0 1 0 0 1 1 1 0 TMEM125 protein family DUF930 PF06059.12 NODE_76560_length_206_cov_1.853801_g68619_i0reverse_frame_1 - 0.11 13.0 0.7 0.27 11.8 0.4 1.8 1 1 0 1 1 1 0 Domain of Unknown Function (DUF930) DUF3677 PF12432.8 NODE_76543_length_206_cov_1.906433_g68602_i0forward_frame_1 - 0.013 15.8 0.0 0.014 15.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3677) Orai-1 PF07856.12 NODE_76537_length_206_cov_1.964912_g68596_i0forward_frame_1 - 0.26 10.9 4.8 0.33 10.6 4.8 1.0 1 0 0 1 1 1 0 Mediator of CRAC channel activity FAS_meander PF17951.1 NODE_76529_length_206_cov_2.029240_g68588_i0forward_frame_1 - 0.023 14.5 0.2 0.026 14.3 0.2 1.1 1 0 0 1 1 1 0 Fatty acid synthase meander beta sheet domain BTHB PF18410.1 NODE_76529_length_206_cov_2.029240_g68588_i0forward_frame_1 - 0.026 14.3 0.9 0.033 14.0 0.9 1.2 1 0 0 1 1 1 0 Basic tilted helix bundle domain zf-C2HE PF16278.5 NODE_76525_length_206_cov_2.052632_g68584_i0reverse_frame_1 - 0.033 14.6 0.7 0.043 14.3 0.7 1.2 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger PP2C PF00481.21 NODE_76514_length_206_cov_2.146199_g68573_i0forward_frame_1 - 2.3e-09 37.3 0.0 2.6e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C MOEP19 PF16005.5 NODE_76509_length_206_cov_2.187135_g68568_i0reverse_frame_1 - 0.12 12.4 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 KH-like RNA-binding domain FtsK_gamma PF09397.10 NODE_76506_length_206_cov_2.216374_g68565_i0forward_frame_1 - 0.14 12.0 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Ftsk gamma domain zf-GRF PF06839.12 NODE_76502_length_206_cov_2.239766_g68561_i0forward_frame_1 - 0.089 12.9 2.0 0.12 12.5 2.0 1.2 1 0 0 1 1 1 0 GRF zinc finger SIR2 PF02146.17 NODE_76501_length_206_cov_2.263158_g68560_i0reverse_frame_1 - 6.5e-11 42.5 0.0 6.9e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 Sir2 family MlaA PF04333.13 NODE_76501_length_206_cov_2.263158_g68560_i0forward_frame_1 - 0.087 12.5 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 MlaA lipoprotein DmpG_comm PF07836.11 NODE_76501_length_206_cov_2.263158_g68560_i0forward_frame_1 - 0.11 12.1 0.1 0.18 11.3 0.1 1.4 1 0 0 1 1 1 0 DmpG-like communication domain ERGIC_N PF13850.6 NODE_76497_length_206_cov_2.298246_g68556_i0reverse_frame_1 - 0.0049 17.2 0.2 0.006 16.9 0.2 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ac110_PIF PF07280.11 NODE_76497_length_206_cov_2.298246_g68556_i0reverse_frame_1 - 1.2 9.0 7.5 7.4 6.5 4.5 2.1 2 0 0 2 2 2 0 Per os infectivity factor AC110 Glyco_transf_54 PF04666.13 NODE_76495_length_206_cov_2.304094_g68554_i0reverse_frame_1 - 0.057 12.3 1.6 0.06 12.2 1.6 1.1 1 0 0 1 1 1 0 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region UCH PF00443.29 NODE_76493_length_206_cov_2.321637_g68552_i0reverse_frame_1 - 0.00058 19.4 0.1 0.00058 19.4 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Humanin PF15040.6 NODE_76492_length_206_cov_2.327485_g68551_i0forward_frame_1 - 0.21 11.0 0.4 0.34 10.4 0.4 1.3 1 0 0 1 1 1 0 Humanin family 7tm_1 PF00001.21 NODE_76491_length_206_cov_2.339181_g68550_i0reverse_frame_1 - 0.37 10.1 4.5 0.4 9.9 4.5 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) SieB PF14163.6 NODE_76489_length_206_cov_2.339181_g68548_i0reverse_frame_1 - 0.12 11.9 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B adh_short PF00106.25 NODE_76489_length_206_cov_2.339181_g68548_i0forward_frame_1 - 5.1e-05 22.8 0.1 6.2e-05 22.5 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Eno-Rase_NADH_b PF12242.8 NODE_76489_length_206_cov_2.339181_g68548_i0forward_frame_1 - 0.0074 16.0 0.0 0.0083 15.9 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KR PF08659.10 NODE_76489_length_206_cov_2.339181_g68548_i0forward_frame_1 - 0.019 14.9 0.2 0.025 14.5 0.2 1.1 1 0 0 1 1 1 0 KR domain THF_DHG_CYH_C PF02882.19 NODE_76489_length_206_cov_2.339181_g68548_i0forward_frame_1 - 0.11 11.8 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Ole-e-6 PF09253.10 NODE_76485_length_206_cov_2.385965_g68544_i0reverse_frame_1 - 0.058 13.4 0.4 0.27 11.2 0.1 2.0 2 0 0 2 2 2 0 Pollen allergen ole e 6 zf-H2C2_2 PF13465.6 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 3.6e-13 49.3 8.8 8.7e-09 35.4 0.3 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 5.1e-08 32.9 10.4 0.00092 19.5 1.9 2.7 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 1.7e-07 31.5 10.8 0.0025 18.5 0.1 3.1 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 1.5e-06 28.0 7.6 0.0058 16.6 0.0 2.9 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 5.6e-05 23.3 4.9 0.003 17.8 0.5 2.6 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.0002 21.0 1.7 0.26 11.1 0.0 2.5 3 0 0 3 3 3 2 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.0087 16.3 1.0 0.0093 16.2 1.0 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-C2HE PF16278.5 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.022 15.2 6.4 0.39 11.2 1.4 2.3 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger FYDLN_acid PF09538.10 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.033 14.9 1.2 1.5 9.6 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (FYDLN_acid) TRAF6_Z2 PF18048.1 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.084 13.0 7.0 0.23 11.6 1.9 2.5 2 0 0 2 2 2 0 TNF receptor-associated factor 6 zinc finger 2 zf-C2H2_2 PF12756.7 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.1 12.9 2.7 4.7 7.6 0.1 2.1 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-Di19 PF05605.12 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.11 12.7 7.7 0.042 14.1 5.2 1.5 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-LYAR PF08790.11 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.12 12.3 1.3 3.3 7.7 0.3 2.3 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger DUF2072 PF09845.9 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 1.2 9.4 4.2 0.86 9.9 0.8 1.9 2 0 0 2 2 2 0 Zn-ribbon containing protein zf_UBZ PF18439.1 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 3.2 7.4 9.6 6.7 6.4 0.8 2.7 2 1 0 2 2 2 0 Ubiquitin-Binding Zinc Finger DAP_epimerase PF01678.19 NODE_76481_length_206_cov_2.456140_g68540_i0forward_frame_1 - 0.1 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Diaminopimelate epimerase Hormone_4 PF00220.17 NODE_76476_length_206_cov_2.514620_g68535_i0forward_frame_1 - 0.21 11.6 1.3 0.57 10.3 1.3 1.7 1 0 0 1 1 1 0 Neurohypophysial hormones, N-terminal Domain DUF959 PF06121.14 NODE_76473_length_206_cov_2.538012_g68532_i0forward_frame_1 - 0.17 12.1 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF959) DUF5320 PF17253.2 NODE_76473_length_206_cov_2.538012_g68532_i0forward_frame_1 - 0.61 11.2 5.9 0.72 11.0 5.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5320) 2Fe-2S_thioredx PF01257.19 NODE_76471_length_206_cov_2.567251_g68530_i0forward_frame_1 - 0.12 12.2 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like [2Fe-2S] ferredoxin UCH PF00443.29 NODE_76449_length_206_cov_3.274854_g68508_i0reverse_frame_1 - 8.9e-06 25.4 0.1 1.2e-05 24.9 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF640 PF04852.12 NODE_76449_length_206_cov_3.274854_g68508_i0reverse_frame_1 - 0.056 13.6 0.0 0.058 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF640) AAA_6 PF12774.7 NODE_76444_length_206_cov_3.549708_g68503_i0forward_frame_1 - 0.018 14.0 0.2 0.019 13.9 0.2 1.0 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region MOZ_SAS PF01853.18 NODE_76441_length_206_cov_3.771930_g68500_i0forward_frame_1 - 0.024 14.3 0.5 0.029 14.0 0.5 1.1 1 0 0 1 1 1 0 MOZ/SAS family TraC_F_IV PF11130.8 NODE_76429_length_206_cov_15.824561_g68488_i0forward_frame_1 - 0.11 12.1 0.1 0.11 12.0 0.1 1.0 1 0 0 1 1 1 0 F pilus assembly Type-IV secretion system for plasmid transfer HypA PF01155.19 NODE_76427_length_206_cov_19.222222_g68486_i0forward_frame_1 - 0.015 15.4 0.2 0.016 15.2 0.2 1.0 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PAPA-1 PF04795.12 NODE_76426_length_206_cov_20.602339_g68485_i0reverse_frame_1 - 0.033 15.0 5.8 0.043 14.6 5.8 1.2 1 0 0 1 1 1 0 PAPA-1-like conserved region Ac76 PF05814.11 NODE_76423_length_206_cov_22.795322_g68482_i0reverse_frame_1 - 0.35 10.9 6.8 0.43 10.6 6.8 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) Peptidase_S49_N PF08496.10 NODE_76417_length_206_cov_32.421053_g68476_i0reverse_frame_1 - 0.61 10.1 8.6 0.73 9.9 8.6 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal IQ PF00612.27 NODE_76400_length_206_cov_46.134503_g68459_i0reverse_frame_1 - 0.01 15.5 1.1 0.01 15.5 1.1 2.1 2 0 0 2 2 2 0 IQ calmodulin-binding motif BRE1 PF08647.11 NODE_76389_length_206_cov_62.625731_g68448_i0reverse_frame_1 - 0.0081 16.2 0.1 0.01 15.9 0.1 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase PEMT PF04191.13 NODE_76382_length_206_cov_83.461988_g68441_i0reverse_frame_1 - 0.21 12.0 0.0 0.25 11.8 0.0 1.1 1 0 0 1 1 1 0 Phospholipid methyltransferase DUF3784 PF12650.7 NODE_76371_length_206_cov_162.988304_g68430_i0forward_frame_1 - 0.16 12.2 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) Peptidase_S49_N PF08496.10 NODE_76365_length_206_cov_303.584795_g68424_i0forward_frame_1 - 2.2 8.3 10.2 2.2 8.3 10.2 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal YMF19 PF02326.15 NODE_76360_length_206_cov_424.210526_g68419_i0forward_frame_1 - 0.027 15.2 0.2 0.034 14.9 0.2 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 zf-C6H2 PF15801.5 NODE_76356_length_206_cov_25948.286550_g68415_i0forward_frame_1 - 0.085 13.2 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding Otopetrin PF03189.13 NODE_76356_length_206_cov_25948.286550_g68415_i0forward_frame_1 - 0.09 11.6 0.0 0.092 11.6 0.0 1.0 1 0 0 1 1 1 0 Otopetrin ubiquitin PF00240.23 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 4.1e-27 93.7 0.3 5.6e-27 93.3 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 1.1e-11 44.4 0.3 1.4e-11 44.0 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 9.3e-06 26.0 0.1 4.7e-05 23.8 0.1 1.9 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 0.0015 18.5 0.0 0.0016 18.3 0.0 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 0.0064 16.6 0.0 0.012 15.7 0.0 1.5 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 0.0068 16.7 0.0 0.0077 16.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 0.051 14.1 0.0 0.059 13.9 0.0 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Fumarate_red_D PF02313.17 NODE_76351_length_207_cov_0.750000_g68410_i0reverse_frame_1 - 0.0067 16.5 0.3 0.0074 16.4 0.3 1.1 1 0 0 1 1 1 1 Fumarate reductase subunit D Folliculin PF11704.8 NODE_76345_length_207_cov_0.906977_g68404_i0reverse_frame_1 - 0.061 13.2 0.0 0.064 13.1 0.0 1.0 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport AF-4 PF05110.13 NODE_76340_length_207_cov_0.924419_g68399_i0reverse_frame_1 - 3.4 5.6 16.6 3.4 5.7 16.6 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein SR-25 PF10500.9 NODE_76340_length_207_cov_0.924419_g68399_i0reverse_frame_1 - 3.7 7.1 17.3 4.3 6.9 17.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Macoilin PF09726.9 NODE_76340_length_207_cov_0.924419_g68399_i0reverse_frame_1 - 9 4.7 6.5 7.7 4.9 6.5 1.0 1 0 0 1 1 1 0 Macoilin family ATP-synt_8 PF00895.20 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 0.025 15.1 4.1 0.025 15.0 0.2 2.0 2 0 0 2 2 2 0 ATP synthase protein 8 TMEM156 PF15106.6 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 0.41 10.1 6.3 0.44 10.0 6.3 1.1 1 0 0 1 1 1 0 TMEM156 protein family DUF3043 PF11241.8 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 0.42 10.6 1.2 0.42 10.6 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) EphA2_TM PF14575.6 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 0.68 10.8 5.3 0.13 13.1 1.1 1.8 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF2207 PF09972.9 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 2.1 7.0 4.2 2.2 7.0 4.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ODV-E18 PF10717.9 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 5.6 6.9 7.0 3.4 7.6 5.2 1.6 1 1 1 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 AC_N PF16214.5 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 7.1 5.6 7.8 7.7 5.5 7.8 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Antimicrobial23 PF16048.5 NODE_76330_length_207_cov_0.930233_g68389_i0reverse_frame_1 - 0.096 12.4 0.4 0.19 11.4 0.4 1.5 1 0 0 1 1 1 0 Frog antimicrobial peptide CobD_Cbib PF03186.13 NODE_76325_length_207_cov_0.930233_g68384_i0reverse_frame_1 - 0.3 10.3 5.9 0.32 10.2 5.9 1.0 1 0 0 1 1 1 0 CobD/Cbib protein DUF3040 PF11239.8 NODE_76325_length_207_cov_0.930233_g68384_i0reverse_frame_1 - 2 8.8 12.8 2.4 8.5 12.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF397 PF04149.12 NODE_76321_length_207_cov_0.930233_g68380_i0reverse_frame_1 - 0.097 12.8 2.4 0.49 10.5 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF397) Glyco_hydro_16 PF00722.21 NODE_76318_length_207_cov_0.930233_g68377_i0forward_frame_1 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 16 DUF3915 PF13054.6 NODE_76316_length_207_cov_0.947674_g68375_i0reverse_frame_1 - 0.065 13.2 0.5 0.067 13.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF4337 PF14235.6 NODE_76316_length_207_cov_0.947674_g68375_i0reverse_frame_1 - 0.14 12.2 0.0 0.16 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) HGWP PF03578.15 NODE_76315_length_207_cov_0.959302_g68374_i0reverse_frame_1 - 0.03 13.8 0.0 0.048 13.2 0.0 1.3 1 0 0 1 1 1 0 HGWP repeat UL16 PF17622.2 NODE_76296_length_207_cov_1.110465_g68355_i0forward_frame_1 - 0.039 13.6 0.1 0.042 13.5 0.1 1.1 1 0 0 1 1 1 0 Viral unique long protein 16 DUF1360 PF07098.11 NODE_76295_length_207_cov_1.110465_g68354_i0reverse_frame_1 - 0.033 14.1 0.2 0.041 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) zf-RING_4 PF14570.6 NODE_76290_length_207_cov_1.156977_g68349_i0reverse_frame_1 - 0.15 11.8 1.6 0.21 11.4 1.6 1.1 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF2652 PF10851.8 NODE_76286_length_207_cov_1.162791_g68345_i0reverse_frame_1 - 0.11 12.7 1.0 0.13 12.4 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2652) Pkinase PF00069.25 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 8.6e-24 84.3 0.0 9e-24 84.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 6.9e-10 38.6 0.0 7.6e-10 38.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 4.4e-05 22.4 0.0 4.8e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 0.0051 16.2 0.0 0.0056 16.0 0.0 1.0 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 0.23 11.4 0.0 0.29 11.0 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family PQ-loop PF04193.14 NODE_76267_length_207_cov_1.261628_g68326_i0forward_frame_1 - 0.12 12.1 0.9 0.55 10.1 0.1 1.9 2 0 0 2 2 2 0 PQ loop repeat Chorein_N PF12624.7 NODE_76264_length_207_cov_1.273256_g68323_i0forward_frame_1 - 0.068 13.3 0.0 0.073 13.2 0.0 1.2 1 0 0 1 1 1 0 N-terminal region of Chorein or VPS13 LRR_6 PF13516.6 NODE_76255_length_207_cov_1.354651_g68314_i0reverse_frame_1 - 1.5e-07 30.9 0.7 0.0038 17.2 0.0 2.6 3 0 0 3 3 3 2 Leucine Rich repeat LRR_1 PF00560.33 NODE_76255_length_207_cov_1.354651_g68314_i0reverse_frame_1 - 0.072 13.7 2.1 2.3 9.1 0.1 2.5 3 0 0 3 3 3 0 Leucine Rich Repeat UNC-50 PF05216.13 NODE_76255_length_207_cov_1.354651_g68314_i0forward_frame_1 - 0.22 11.0 4.2 0.26 10.8 4.2 1.0 1 0 0 1 1 1 0 UNC-50 family Ephrin_rec_like PF07699.13 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 9.5e-06 25.3 11.3 1e-05 25.2 8.0 2.6 1 1 1 2 2 2 1 Putative ephrin-receptor like TNFR_c6 PF00020.18 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 0.0011 19.3 3.0 0.0029 18.0 1.6 2.4 2 1 0 2 2 2 1 TNFR/NGFR cysteine-rich region Hormone_4 PF00220.17 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 2.3 8.4 5.4 1.2e+02 3.1 0.2 4.1 4 0 0 4 4 4 0 Neurohypophysial hormones, N-terminal Domain Opy2 PF09463.10 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 3.9 7.9 14.1 1.2 9.6 6.0 3.1 1 1 2 3 3 3 0 Opy2 protein IHABP4_N PF16174.5 NODE_76246_length_207_cov_1.389535_g68305_i0reverse_frame_1 - 0.12 13.0 10.2 0.12 13.0 10.2 1.0 1 0 0 1 1 1 0 Intracellular hyaluronan-binding protein 4 N-terminal V-ATPase_G PF03179.15 NODE_76243_length_207_cov_1.389535_g68302_i0reverse_frame_1 - 0.11 13.0 6.7 0.12 12.9 6.7 1.1 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF4140 PF13600.6 NODE_76243_length_207_cov_1.389535_g68302_i0reverse_frame_1 - 0.77 10.2 5.4 0.99 9.9 5.4 1.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF3673 PF12425.8 NODE_76240_length_207_cov_1.395349_g68299_i0reverse_frame_1 - 0.19 11.7 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3673) Ras PF00071.22 NODE_76238_length_207_cov_1.395349_g68297_i0reverse_frame_1 - 9.8e-05 22.0 0.0 9.8e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_76238_length_207_cov_1.395349_g68297_i0reverse_frame_1 - 0.00025 21.2 0.0 0.00026 21.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase PHC2_SAM_assoc PF16616.5 NODE_76231_length_207_cov_1.395349_g68290_i0reverse_frame_1 - 0.087 13.6 2.3 0.093 13.5 2.3 1.1 1 0 0 1 1 1 0 Unstructured region on Polyhomeotic-like protein 1 and 2 Totivirus_coat PF05518.11 NODE_76219_length_207_cov_1.470930_g68278_i0reverse_frame_1 - 3.5 5.6 5.2 3.7 5.5 5.2 1.0 1 0 0 1 1 1 0 Totivirus coat protein Lysis_col PF02402.16 NODE_76215_length_207_cov_1.511628_g68274_i0forward_frame_1 - 0.29 10.8 1.1 0.43 10.3 0.2 1.7 2 0 0 2 2 2 0 Lysis protein SUI1 PF01253.22 NODE_76211_length_207_cov_1.529070_g68270_i0reverse_frame_1 - 0.009 16.5 0.3 0.098 13.2 0.1 2.1 2 1 0 2 2 2 1 Translation initiation factor SUI1 CENP-N PF05238.13 NODE_76211_length_207_cov_1.529070_g68270_i0reverse_frame_1 - 0.025 13.9 0.1 0.028 13.7 0.1 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks355.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks355.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks355.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks355.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:19:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- U71 PF17474.2 NODE_76202_length_207_cov_1.598837_g68261_i0reverse_frame_1 - 2.4 8.2 9.0 7.5 6.6 1.8 2.1 1 1 1 2 2 2 0 Tegument protein UL11 homolog Mga PF05043.13 NODE_76193_length_207_cov_1.627907_g68252_i0reverse_frame_1 - 0.084 13.5 0.5 0.092 13.3 0.5 1.3 1 1 0 1 1 1 0 Mga helix-turn-helix domain Zn_ribbon_17 PF17120.5 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.093 12.4 0.3 0.12 12.0 0.3 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.098 13.0 1.4 0.14 12.4 1.4 1.3 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.2 11.5 2.5 0.25 11.1 1.0 2.0 2 0 0 2 2 2 0 RING-like zinc finger zf-RING_2 PF13639.6 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.21 12.0 0.8 0.32 11.4 0.8 1.3 1 0 0 1 1 1 0 Ring finger domain SSXT PF05030.12 NODE_76184_length_207_cov_1.674419_g68243_i0forward_frame_1 - 0.0012 18.5 0.1 0.0014 18.2 0.1 1.1 1 0 0 1 1 1 1 SSXT protein (N-terminal region) Phage_G PF02306.15 NODE_76179_length_207_cov_1.726744_g68238_i0forward_frame_1 - 0.14 11.9 1.1 6.1 6.5 0.1 2.0 1 1 1 2 2 2 0 Major spike protein (G protein) Alpha_Helical PF18489.1 NODE_76169_length_207_cov_1.767442_g68228_i0reverse_frame_1 - 0.077 13.2 0.1 0.086 13.0 0.1 1.0 1 0 0 1 1 1 0 Alpha helical domain DUF294_C PF10335.9 NODE_76166_length_207_cov_1.779070_g68225_i0forward_frame_1 - 0.13 12.0 0.0 0.15 11.8 0.0 1.0 1 0 0 1 1 1 0 Putative nucleotidyltransferase substrate binding domain SlyX PF04102.12 NODE_76159_length_207_cov_1.813953_g68218_i0reverse_frame_1 - 0.014 16.0 0.6 0.016 15.8 0.6 1.2 1 0 0 1 1 1 0 SlyX HrpB7 PF09486.10 NODE_76159_length_207_cov_1.813953_g68218_i0reverse_frame_1 - 0.026 14.9 0.2 0.031 14.7 0.2 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) TPR_MLP1_2 PF07926.12 NODE_76159_length_207_cov_1.813953_g68218_i0reverse_frame_1 - 0.058 13.5 0.0 0.068 13.2 0.0 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein RabGAP-TBC PF00566.18 NODE_76158_length_207_cov_1.825581_g68217_i0reverse_frame_1 - 1.1e-14 54.6 0.0 1.3e-14 54.4 0.0 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain HEPN_SAV_6107 PF18726.1 NODE_76145_length_207_cov_1.930233_g68204_i0reverse_frame_1 - 0.18 12.3 3.9 0.22 12.1 3.9 1.1 1 0 0 1 1 1 0 SAV_6107-like HEPN PRD PF00874.20 NODE_76136_length_207_cov_2.034884_g68195_i0reverse_frame_1 - 0.039 14.2 1.8 0.33 11.3 0.6 1.9 1 1 1 2 2 2 0 PRD domain Fib_alpha PF08702.10 NODE_76131_length_207_cov_2.087209_g68190_i0reverse_frame_1 - 0.0086 16.3 3.2 0.0099 16.1 3.2 1.1 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family RNA_pol_Rpb1_3 PF04983.18 NODE_76131_length_207_cov_2.087209_g68190_i0reverse_frame_1 - 0.065 13.2 1.6 0.069 13.1 1.6 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 3 Seryl_tRNA_N PF02403.22 NODE_76131_length_207_cov_2.087209_g68190_i0reverse_frame_1 - 0.45 10.8 7.6 3.1 8.1 7.6 1.9 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain tRNA-synt_1 PF00133.22 NODE_76120_length_207_cov_2.215116_g68179_i0forward_frame_1 - 4.9e-19 68.0 0.2 5.3e-19 67.9 0.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 NODE_76120_length_207_cov_2.215116_g68179_i0forward_frame_1 - 0.0021 16.9 0.0 0.0021 16.9 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 NODE_76120_length_207_cov_2.215116_g68179_i0forward_frame_1 - 0.028 13.8 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain tRNA-synt_1d PF00750.19 NODE_76120_length_207_cov_2.215116_g68179_i0forward_frame_1 - 0.056 12.4 0.0 0.059 12.3 0.0 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (R) zf-RRN7 PF11781.8 NODE_76116_length_207_cov_2.244186_g68175_i0forward_frame_1 - 0.025 14.3 0.5 0.042 13.5 0.5 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Pkinase PF00069.25 NODE_76094_length_207_cov_2.436047_g68153_i0reverse_frame_1 - 3.8e-05 23.2 0.1 4.9e-05 22.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 NODE_76094_length_207_cov_2.436047_g68153_i0reverse_frame_1 - 0.015 14.9 0.1 0.018 14.6 0.1 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUF3935 PF13071.6 NODE_76088_length_207_cov_2.517442_g68147_i0reverse_frame_1 - 0.053 14.1 0.0 0.073 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3935) Zip PF02535.22 NODE_76074_length_207_cov_2.860465_g68133_i0reverse_frame_1 - 4.9e-17 62.2 0.5 4.9e-17 62.2 0.5 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter PMP22_Claudin PF00822.20 NODE_76074_length_207_cov_2.860465_g68133_i0reverse_frame_1 - 0.096 12.6 0.2 0.1 12.5 0.2 1.0 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family Pkinase PF00069.25 NODE_76066_length_207_cov_3.133721_g68125_i0forward_frame_1 - 2.6e-10 40.1 0.0 2.8e-10 40.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain tRNA-synt_2 PF00152.20 NODE_76058_length_207_cov_4.052326_g68117_i0reverse_frame_1 - 0.066 12.3 0.0 0.066 12.3 0.0 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) Methyltrans_RNA PF04452.14 NODE_76055_length_207_cov_17.203488_g68114_i0reverse_frame_1 - 9.2e-06 25.2 0.0 9.4e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 RNA methyltransferase 3HCDH_RFF PF18321.1 NODE_76055_length_207_cov_17.203488_g68114_i0reverse_frame_1 - 0.019 15.4 0.0 0.049 14.1 0.0 1.6 2 0 0 2 2 2 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain YqfQ PF14181.6 NODE_76045_length_207_cov_34.627907_g68104_i0reverse_frame_1 - 0.036 14.3 3.7 0.043 14.0 3.7 1.1 1 0 0 1 1 1 0 YqfQ-like protein DUF1286 PF06939.11 NODE_76045_length_207_cov_34.627907_g68104_i0forward_frame_1 - 0.031 14.5 0.9 0.038 14.3 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1286) Phage_holin_3_6 PF07332.11 NODE_76045_length_207_cov_34.627907_g68104_i0forward_frame_1 - 0.12 12.5 11.8 0.13 12.3 11.8 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III RseC_MucC PF04246.12 NODE_76045_length_207_cov_34.627907_g68104_i0forward_frame_1 - 1.8 8.5 6.9 2.1 8.3 6.9 1.0 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF1138 PF06592.13 NODE_76036_length_207_cov_41.901163_g68095_i0reverse_frame_1 - 0.12 12.5 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1138) 60KD_IMP PF02096.20 NODE_76034_length_207_cov_43.209302_g68093_i0reverse_frame_1 - 0.067 13.1 9.2 0.075 12.9 9.2 1.1 1 0 0 1 1 1 0 60Kd inner membrane protein YajC PF02699.15 NODE_76033_length_207_cov_43.680233_g68092_i0forward_frame_1 - 0.021 14.7 0.3 0.033 14.1 0.3 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit CDC24_OB3 PF17244.2 NODE_76027_length_207_cov_49.488372_g68086_i0reverse_frame_1 - 0.13 12.0 1.1 0.13 12.0 1.1 1.0 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 NrsF PF06532.11 NODE_76027_length_207_cov_49.488372_g68086_i0forward_frame_1 - 0.01 15.6 0.0 0.01 15.6 0.0 1.0 1 0 0 1 1 1 0 Negative regulator of sigma F STPPase_N PF16891.5 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_1 - 0.012 16.1 0.7 0.02 15.3 0.7 1.4 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain Viral_DNA_bp PF00747.17 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_1 - 4.6 4.3 7.4 4.7 4.2 7.4 1.0 1 0 0 1 1 1 0 ssDNA binding protein DUF971 PF06155.12 NODE_76019_length_207_cov_63.982558_g68078_i0forward_frame_1 - 0.15 12.7 0.0 0.16 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF971) DUF3952 PF13130.6 NODE_76017_length_207_cov_67.395349_g68076_i0forward_frame_1 - 0.01 16.0 1.8 0.013 15.7 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3952) Bromodomain PF00439.25 NODE_76017_length_207_cov_67.395349_g68076_i0forward_frame_1 - 0.037 14.1 0.5 0.06 13.4 0.2 1.5 1 1 1 2 2 2 0 Bromodomain Myco_arth_vir_N PF09610.10 NODE_76017_length_207_cov_67.395349_g68076_i0forward_frame_1 - 0.37 10.9 3.9 0.57 10.3 3.9 1.3 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) DUF667 PF05018.13 NODE_76002_length_207_cov_102.680233_g68061_i0forward_frame_1 - 0.11 12.2 0.0 0.13 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF667) BCL_N PF04714.13 NODE_75986_length_207_cov_625.895349_g68045_i0reverse_frame_1 - 0.036 14.1 1.6 0.054 13.6 1.6 1.3 1 0 0 1 1 1 0 BCL7, N-terminal conserver region Babuvirus_MP PF07234.11 NODE_75984_length_207_cov_111783.494186_g68043_i0reverse_frame_1 - 0.99 9.6 6.5 1 9.6 6.5 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein Trypan_PARP PF05887.11 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 0.04 13.9 5.4 0.041 13.9 5.4 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF4770 PF15994.5 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 0.65 10.2 26.9 0.69 10.1 26.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) FAM176 PF14851.6 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 1.7 8.3 7.1 1.8 8.2 7.1 1.1 1 0 0 1 1 1 0 FAM176 family DUF719 PF05334.13 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 3 8.0 12.2 3.3 7.9 12.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF719) DUF4834 PF16118.5 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 3.8 8.5 17.7 5 8.1 17.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Tim54 PF11711.8 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 4.2 6.1 18.2 4.4 6.0 18.2 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Coilin_N PF15862.5 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 4.7 7.0 16.2 6.2 6.6 16.2 1.2 1 0 0 1 1 1 0 Coilin N-terminus CSG2 PF16965.5 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 5.1 5.9 6.1 5.1 5.9 6.1 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator PIP5K PF01504.18 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 5.2 6.2 12.0 5.4 6.1 12.0 1.0 1 0 0 1 1 1 0 Phosphatidylinositol-4-phosphate 5-Kinase AIF_C PF14721.6 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 5.2 7.4 11.2 6 7.2 11.2 1.1 1 0 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term CPSF100_C PF13299.6 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 5.3 7.2 14.6 5.6 7.1 14.6 1.0 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal Peptidase_S49_N PF08496.10 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 7.3 6.6 12.5 8.2 6.5 12.5 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal ALMT PF11744.8 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 7.8 5.2 10.0 8.1 5.1 10.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Rxt3 PF08642.10 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 8.7 7.1 10.2 10 6.9 10.2 1.2 1 0 0 1 1 1 0 Histone deacetylation protein Rxt3 V_ATPase_I PF01496.19 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 8.8 4.1 15.6 9.2 4.0 15.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family SpoIIP PF07454.11 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 8.9 5.7 18.4 9.5 5.6 18.4 1.0 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) Connexin PF00029.19 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 9.2 5.9 12.1 9.4 5.9 12.1 1.0 1 0 0 1 1 1 0 Connexin Peroxin-13_N PF04088.13 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 9.5 6.5 9.0 10 6.3 9.0 1.1 1 0 0 1 1 1 0 Peroxin 13, N-terminal region UbiA PF01040.18 NODE_75983_length_208_cov_0.763006_g68042_i0forward_frame_3 - 1.2 8.3 17.1 1.4 8.1 17.1 1.1 1 0 0 1 1 1 0 UbiA prenyltransferase family NST1 PF13945.6 NODE_75973_length_208_cov_0.919075_g68032_i0reverse_frame_2 - 6.1 6.9 20.3 6.4 6.8 20.3 1.0 1 0 0 1 1 1 0 Salt tolerance down-regulator EMC3_TMCO1 PF01956.16 NODE_75973_length_208_cov_0.919075_g68032_i0reverse_frame_2 - 9.2 6.0 7.0 10 5.8 7.0 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like SP_C-Propep PF08999.10 NODE_75970_length_208_cov_0.919075_g68029_i0reverse_frame_3 - 0.031 14.0 1.5 0.033 14.0 1.5 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF4307 PF14155.6 NODE_75970_length_208_cov_0.919075_g68029_i0reverse_frame_3 - 0.04 13.7 2.7 0.047 13.5 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF2895 PF11444.8 NODE_75970_length_208_cov_0.919075_g68029_i0reverse_frame_3 - 0.12 11.7 0.1 0.13 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2895) GBV-C_env PF12786.7 NODE_75970_length_208_cov_0.919075_g68029_i0reverse_frame_3 - 0.17 10.5 0.5 0.18 10.5 0.5 1.0 1 0 0 1 1 1 0 GB virus C genotype envelope DUF674 PF05056.12 NODE_75970_length_208_cov_0.919075_g68029_i0forward_frame_3 - 0.065 12.1 0.0 0.074 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF674) Lamprin PF06403.11 NODE_75969_length_208_cov_0.919075_g68028_i0forward_frame_2 - 0.0068 16.4 0.4 0.0072 16.3 0.4 1.1 1 0 0 1 1 1 1 Lamprin Toxin_31 PF08119.11 NODE_75966_length_208_cov_0.924855_g68025_i0reverse_frame_3 - 0.13 12.1 0.1 1.3 8.8 0.0 2.0 2 0 0 2 2 2 0 Scorpion acidic alpha-KTx toxin family HP1451_C PF18472.1 NODE_75965_length_208_cov_0.924855_g68024_i0reverse_frame_3 - 0.087 12.8 0.0 0.14 12.2 0.0 1.3 1 1 0 1 1 1 0 HP1451 C-terminal domain DHHC PF01529.20 NODE_75961_length_208_cov_0.924855_g68020_i0reverse_frame_3 - 0.091 12.9 0.8 0.091 12.9 0.8 1.5 1 1 0 1 1 1 0 DHHC palmitoyltransferase Phage_TTP_13 PF16463.5 NODE_75942_length_208_cov_0.976879_g68001_i0forward_frame_3 - 0.0029 17.1 0.0 0.0036 16.8 0.0 1.1 1 0 0 1 1 1 1 Phage tail tube protein family CCSMST1 PF15013.6 NODE_75942_length_208_cov_0.976879_g68001_i0forward_frame_3 - 0.038 14.2 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 CCSMST1 family ubiquitin PF00240.23 NODE_75941_length_208_cov_0.976879_g68000_i0reverse_frame_2 - 9.2e-05 22.1 0.2 0.00011 21.9 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin family DUF3435 PF11917.8 NODE_75937_length_208_cov_1.017341_g67996_i0reverse_frame_3 - 0.13 11.1 0.1 0.15 11.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Tad PF13400.6 NODE_75935_length_208_cov_1.034682_g67994_i0forward_frame_3 - 0.0038 17.5 4.1 0.0038 17.5 4.1 2.1 2 0 0 2 2 2 1 Putative Flp pilus-assembly TadE/G-like LCE PF14672.6 NODE_75931_length_208_cov_1.057803_g67990_i0forward_frame_2 - 5.6 7.6 10.2 15 6.3 10.1 1.8 1 1 0 1 1 1 0 Late cornified envelope Tropomyosin_1 PF12718.7 NODE_75928_length_208_cov_1.086705_g67987_i0forward_frame_2 - 0.067 13.4 0.2 0.076 13.2 0.2 1.1 1 0 0 1 1 1 0 Tropomyosin like Pox_P21 PF05313.12 NODE_75923_length_208_cov_1.098266_g67982_i0reverse_frame_2 - 0.025 14.1 1.5 0.026 14.1 1.5 1.0 1 0 0 1 1 1 0 Poxvirus P21 membrane protein DUF1356 PF07092.12 NODE_75923_length_208_cov_1.098266_g67982_i0reverse_frame_2 - 0.063 12.5 0.6 0.066 12.5 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) MCM_lid PF17855.1 NODE_75919_length_208_cov_1.150289_g67978_i0forward_frame_3 - 6.9e-11 42.4 0.8 1.2e-10 41.7 0.8 1.4 1 0 0 1 1 1 1 MCM AAA-lid domain Toxin_27 PF08099.11 NODE_75912_length_208_cov_1.156069_g67971_i0forward_frame_3 - 0.037 14.1 0.9 0.16 12.1 0.1 2.3 3 0 0 3 3 3 0 Scorpion calcine family TMEM154 PF15102.6 NODE_75912_length_208_cov_1.156069_g67971_i0forward_frame_3 - 0.056 13.3 0.1 0.068 13.1 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family SLD3 PF08639.10 NODE_75912_length_208_cov_1.156069_g67971_i0forward_frame_3 - 0.18 10.5 0.1 0.19 10.4 0.1 1.0 1 0 0 1 1 1 0 DNA replication regulator SLD3 ITAM_Cys-rich PF10538.9 NODE_75911_length_208_cov_1.161850_g67970_i0reverse_frame_2 - 0.019 14.7 1.3 0.036 13.8 1.3 1.4 1 0 0 1 1 1 0 Immunoreceptor tyrosine-based activation motif Ion_trans PF00520.31 NODE_75908_length_208_cov_1.219653_g67967_i0forward_frame_2 - 0.0031 16.8 3.1 0.0036 16.6 3.1 1.0 1 0 0 1 1 1 1 Ion transport protein RAMP4 PF06624.12 NODE_75904_length_208_cov_1.260116_g67963_i0reverse_frame_3 - 2.3 8.4 6.7 3 8.0 6.7 1.3 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 DUF1978 PF09321.10 NODE_75902_length_208_cov_1.271676_g67961_i0reverse_frame_3 - 0.071 12.4 0.3 0.081 12.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1978) Cytochrom_B559 PF00283.19 NODE_75900_length_208_cov_1.277457_g67959_i0reverse_frame_3 - 0.48 9.9 0.3 0.48 9.9 0.3 2.4 4 0 0 4 4 4 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Phage_Gp15 PF06854.11 NODE_75895_length_208_cov_1.323699_g67954_i0reverse_frame_3 - 0.024 14.6 0.7 0.026 14.5 0.7 1.0 1 0 0 1 1 1 0 Bacteriophage Gp15 protein DUF2917 PF11142.8 NODE_75893_length_208_cov_1.335260_g67952_i0reverse_frame_3 - 0.033 13.6 0.8 0.048 13.1 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2917) zf-H2C2_2 PF13465.6 NODE_75890_length_208_cov_1.358382_g67949_i0forward_frame_2 - 0.079 13.4 0.4 0.15 12.5 0.4 1.5 1 0 0 1 1 1 0 Zinc-finger double domain Pyridox_oxase_2 PF12766.7 NODE_75883_length_208_cov_1.375723_g67942_i0reverse_frame_2 - 0.07 13.7 0.0 0.085 13.5 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF3819 PF12842.7 NODE_75883_length_208_cov_1.375723_g67942_i0reverse_frame_2 - 0.13 12.2 0.0 0.14 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3819) LYTB PF02401.18 NODE_75882_length_208_cov_1.375723_g67941_i0forward_frame_2 - 0.11 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 LytB protein HJURP_C PF12347.8 NODE_75880_length_208_cov_1.381503_g67939_i0forward_frame_3 - 0.058 13.4 0.6 0.092 12.8 0.3 1.7 1 1 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat zf-Di19 PF05605.12 NODE_75879_length_208_cov_1.381503_g67938_i0reverse_frame_2 - 0.00017 21.8 0.1 0.00024 21.4 0.1 1.2 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_4 PF13894.6 NODE_75879_length_208_cov_1.381503_g67938_i0reverse_frame_2 - 0.0057 17.4 0.3 0.011 16.4 0.3 1.6 1 0 0 1 1 1 1 C2H2-type zinc finger Zn_Tnp_IS1595 PF12760.7 NODE_75879_length_208_cov_1.381503_g67938_i0reverse_frame_2 - 0.076 13.0 0.0 0.098 12.6 0.0 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain ATPase PF06745.13 NODE_75877_length_208_cov_1.387283_g67936_i0forward_frame_3 - 0.13 11.6 0.0 0.15 11.4 0.0 1.0 1 0 0 1 1 1 0 KaiC RseC_MucC PF04246.12 NODE_75871_length_208_cov_1.387283_g67930_i0forward_frame_2 - 0.19 11.7 1.4 0.2 11.6 1.4 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC hNIFK_binding PF12196.8 NODE_75869_length_208_cov_1.387283_g67928_i0forward_frame_3 - 0.14 11.7 0.1 0.21 11.1 0.1 1.2 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK DoxD PF04173.13 NODE_75868_length_208_cov_1.387283_g67927_i0forward_frame_2 - 0.045 13.7 0.2 0.047 13.6 0.2 1.0 1 0 0 1 1 1 0 TQO small subunit DoxD DUF4637 PF15470.6 NODE_75864_length_208_cov_1.398844_g67923_i0reverse_frame_3 - 3.1 7.5 13.6 3.3 7.4 13.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Nucleos_tra2_N PF01773.20 NODE_75864_length_208_cov_1.398844_g67923_i0forward_frame_2 - 3.7 8.2 8.9 4.3 8.0 3.3 2.3 1 1 2 3 3 3 0 Na+ dependent nucleoside transporter N-terminus RabGAP-TBC PF00566.18 NODE_75861_length_208_cov_1.416185_g67920_i0forward_frame_3 - 0.00024 20.8 0.0 0.00026 20.7 0.0 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DPPIV_rep PF18811.1 NODE_75852_length_208_cov_1.445087_g67911_i0reverse_frame_2 - 0.16 11.9 0.3 10 6.2 0.0 2.3 2 0 0 2 2 2 0 Dipeptidyl peptidase IV (DPP IV) low complexity region Tudor_4 PF18358.1 NODE_75851_length_208_cov_1.450867_g67910_i0forward_frame_2 - 0.026 14.1 0.0 0.034 13.7 0.0 1.2 1 0 0 1 1 1 0 Histone methyltransferase Tudor domain C_tripleX PF02363.19 NODE_75848_length_208_cov_1.468208_g67907_i0forward_frame_3 - 0.055 13.8 3.0 0.15 12.4 3.0 1.8 1 1 0 1 1 1 0 Cysteine rich repeat YbgT_YccB PF08173.11 NODE_75848_length_208_cov_1.468208_g67907_i0forward_frame_2 - 0.15 12.2 3.1 0.96 9.6 0.1 2.2 1 1 1 2 2 2 0 Membrane bound YbgT-like protein C_tripleX PF02363.19 NODE_75848_length_208_cov_1.468208_g67907_i0forward_frame_2 - 6.2 7.3 13.9 1.7 9.1 1.0 2.6 3 0 0 3 3 3 0 Cysteine rich repeat SAND PF01342.21 NODE_75842_length_208_cov_1.508671_g67901_i0reverse_frame_3 - 0.0092 15.7 0.0 0.01 15.5 0.0 1.2 1 0 0 1 1 1 1 SAND domain LysM PF01476.20 NODE_75841_length_208_cov_1.508671_g67900_i0reverse_frame_3 - 0.1 12.7 0.8 3.3 7.8 0.0 2.2 1 1 1 2 2 2 0 LysM domain UpxZ PF06603.11 NODE_75840_length_208_cov_1.520231_g67899_i0reverse_frame_2 - 0.1 12.9 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 UpxZ family of transcription anti-terminator antagonists VP4_haemagglut PF00426.18 NODE_75840_length_208_cov_1.520231_g67899_i0forward_frame_2 - 0.0043 17.3 0.1 0.0046 17.2 0.1 1.0 1 0 0 1 1 1 1 Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain DUF4680 PF15730.5 NODE_75835_length_208_cov_1.543353_g67894_i0forward_frame_2 - 0.026 14.9 1.0 0.029 14.7 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4680) DUF3969 PF13108.6 NODE_75833_length_208_cov_1.549133_g67892_i0reverse_frame_3 - 0.0062 16.5 0.8 0.0074 16.3 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3969) VitD-bind_III PF09164.10 NODE_75830_length_208_cov_1.566474_g67889_i0reverse_frame_3 - 0.029 14.4 0.1 0.04 13.9 0.1 1.2 1 0 0 1 1 1 0 Vitamin D binding protein, domain III Phtf-FEM1B_bdg PF12129.8 NODE_75824_length_208_cov_1.606936_g67883_i0reverse_frame_2 - 0.58 10.0 3.8 0.59 10.0 3.8 1.0 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor XPA_N PF01286.18 NODE_75816_length_208_cov_1.630058_g67875_i0forward_frame_3 - 0.21 11.6 0.7 0.39 10.8 0.7 1.5 1 0 0 1 1 1 0 XPA protein N-terminal PDR_assoc PF08370.11 NODE_75814_length_208_cov_1.664740_g67873_i0forward_frame_3 - 0.24 11.2 4.0 2.4 8.0 0.4 2.3 1 1 1 2 2 2 0 Plant PDR ABC transporter associated XAF1_C PF18608.1 NODE_75813_length_208_cov_1.664740_g67872_i0forward_frame_2 - 0.13 11.8 0.3 0.18 11.4 0.3 1.4 1 1 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain Ephrin_rec_like PF07699.13 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 2.9e-07 30.1 17.3 1.4e-05 24.7 6.7 2.4 1 1 1 2 2 2 2 Putative ephrin-receptor like NCD3G PF07562.14 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 0.017 15.1 4.9 0.037 14.0 1.3 2.2 1 1 1 2 2 2 0 Nine Cysteines Domain of family 3 GPCR zf-ACC PF17848.1 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 0.093 12.8 2.0 2.6 8.2 0.0 2.9 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain Pentapeptide_2 PF01469.18 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 0.22 11.4 26.3 0.39 10.6 11.7 3.3 2 2 0 2 2 2 0 Pentapeptide repeats (8 copies) TNFR_c6 PF00020.18 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 0.91 10.0 9.6 1.6 9.2 2.3 3.3 2 1 1 3 3 3 0 TNFR/NGFR cysteine-rich region DNA_ligase_OB_2 PF14743.6 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 2.3 8.3 4.2 9.1 6.4 0.2 2.0 2 0 0 2 2 2 0 DNA ligase OB-like domain Herpes_TK_C PF08465.10 NODE_75806_length_208_cov_1.699422_g67865_i0reverse_frame_2 - 0.086 12.6 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 Thymidine kinase from Herpesvirus C-terminal SpoVAC_SpoVAEB PF03862.13 NODE_75805_length_208_cov_1.705202_g67864_i0forward_frame_2 - 0.0094 16.2 0.1 0.011 16.1 0.1 1.0 1 0 0 1 1 1 1 SpoVAC/SpoVAEB sporulation membrane protein Op_neuropeptide PF08035.11 NODE_75804_length_208_cov_1.716763_g67863_i0reverse_frame_2 - 0.055 13.3 0.0 0.082 12.8 0.0 1.3 1 0 0 1 1 1 0 Opioids neuropeptide Herpes_env PF01673.18 NODE_75804_length_208_cov_1.716763_g67863_i0forward_frame_3 - 0.1 11.5 0.1 0.12 11.3 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus putative major envelope glycoprotein UIM PF02809.20 NODE_75800_length_208_cov_1.757225_g67859_i0forward_frame_2 - 0.00079 19.2 2.1 0.0014 18.4 2.1 1.5 1 0 0 1 1 1 1 Ubiquitin interaction motif Pkinase PF00069.25 NODE_75799_length_208_cov_1.774566_g67858_i0forward_frame_3 - 5.1e-05 22.8 0.1 5.4e-05 22.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_75799_length_208_cov_1.774566_g67858_i0forward_frame_3 - 0.02 14.2 0.0 0.022 14.1 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase Aminotran_5 PF00266.19 NODE_75797_length_208_cov_1.791908_g67856_i0reverse_frame_2 - 2.8e-22 79.2 0.3 2.9e-22 79.1 0.3 1.0 1 0 0 1 1 1 1 Aminotransferase class-V EpoR_lig-bind PF09067.10 NODE_75796_length_208_cov_1.809249_g67855_i0reverse_frame_2 - 0.013 15.7 0.4 0.013 15.7 0.4 1.1 1 0 0 1 1 1 0 Erythropoietin receptor, ligand binding Fanconi_A PF03511.14 NODE_75795_length_208_cov_1.815029_g67854_i0forward_frame_3 - 1.5 8.8 4.5 1.5 8.8 3.8 1.4 1 1 0 1 1 1 0 Fanconi anaemia group A protein Phage_holin_2_1 PF04971.12 NODE_75787_length_208_cov_1.843931_g67846_i0reverse_frame_3 - 0.0086 16.1 0.0 0.013 15.5 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage P21 holin S Vault PF01505.18 NODE_75787_length_208_cov_1.843931_g67846_i0reverse_frame_3 - 0.16 12.1 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Major Vault Protein repeat domain DUF1168 PF06658.12 NODE_75779_length_208_cov_1.901734_g67838_i0reverse_frame_2 - 0.013 15.3 1.0 0.016 15.0 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Joubert PF15392.6 NODE_75779_length_208_cov_1.901734_g67838_i0reverse_frame_2 - 0.033 13.9 1.6 0.034 13.9 1.6 1.0 1 0 0 1 1 1 0 Joubert syndrome-associated Gag_p24 PF00607.20 NODE_75778_length_208_cov_1.907514_g67837_i0forward_frame_2 - 0.097 12.5 0.0 0.1 12.4 0.0 1.0 1 0 0 1 1 1 0 gag gene protein p24 (core nucleocapsid protein) Spore_YhaL PF14147.6 NODE_75777_length_208_cov_1.924855_g67836_i0reverse_frame_2 - 0.08 12.6 0.8 0.14 11.8 0.8 1.4 1 0 0 1 1 1 0 Sporulation protein YhaL Elong_Iki1 PF10483.9 NODE_75773_length_208_cov_1.942197_g67832_i0reverse_frame_2 - 0.068 12.7 0.1 0.068 12.7 0.1 1.0 1 0 0 1 1 1 0 Elongator subunit Iki1 DUF2256 PF10013.9 NODE_75773_length_208_cov_1.942197_g67832_i0forward_frame_2 - 0.59 10.3 8.0 2.7 8.2 5.2 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF3890 PF13029.6 NODE_75772_length_208_cov_1.965318_g67831_i0forward_frame_3 - 0.64 10.5 5.7 3 8.4 2.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3890) CKS PF01111.19 NODE_75768_length_208_cov_1.976879_g67827_i0forward_frame_3 - 0.0017 18.6 0.6 0.0035 17.6 0.2 1.8 2 0 0 2 2 2 1 Cyclin-dependent kinase regulatory subunit Epimerase PF01370.21 NODE_75767_length_208_cov_1.976879_g67826_i0forward_frame_2 - 0.19 11.2 0.0 0.21 11.0 0.0 1.0 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Collectrin PF16959.5 NODE_75763_length_208_cov_2.080925_g67822_i0forward_frame_3 - 0.13 12.1 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter Doppel PF11466.8 NODE_75760_length_208_cov_2.121387_g67819_i0reverse_frame_2 - 0.16 11.7 2.1 0.25 11.0 1.0 1.9 2 0 0 2 2 2 0 Prion-like protein Doppel ODAPH PF15848.5 NODE_75751_length_208_cov_2.260116_g67810_i0reverse_frame_2 - 0.018 15.5 1.3 0.046 14.2 1.3 1.7 1 1 0 1 1 1 0 Odontogenesis associated phosphoprotein DUF998 PF06197.13 NODE_75738_length_208_cov_2.421965_g67797_i0reverse_frame_2 - 0.064 12.9 3.8 0.084 12.5 3.8 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF998) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks356.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks356.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks356.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks356.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-CCHC_6 PF15288.6 NODE_75737_length_208_cov_2.473988_g67796_i0forward_frame_2 - 0.043 13.7 0.4 6.6 6.7 0.1 2.1 2 0 0 2 2 2 0 Zinc knuckle DUF2575 PF10837.8 NODE_75728_length_208_cov_2.653179_g67787_i0reverse_frame_3 - 0.064 13.6 0.2 0.075 13.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2575) IQ PF00612.27 NODE_75727_length_208_cov_2.653179_g67786_i0forward_frame_3 - 2.7e-05 23.6 1.2 7.2e-05 22.2 1.2 1.8 1 0 0 1 1 1 1 IQ calmodulin-binding motif MORN PF02493.20 NODE_75724_length_208_cov_2.832370_g67783_i0reverse_frame_3 - 0.0099 15.7 3.8 0.017 15.0 3.8 1.3 1 0 0 1 1 1 1 MORN repeat MORN PF02493.20 NODE_75724_length_208_cov_2.832370_g67783_i0reverse_frame_2 - 1e-07 31.4 9.4 0.00014 21.5 0.5 2.8 3 0 0 3 3 3 2 MORN repeat DUF1163 PF06651.11 NODE_75721_length_208_cov_2.936416_g67780_i0forward_frame_3 - 0.025 14.7 0.4 0.041 14.0 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1163) Interferon PF00143.19 NODE_75719_length_208_cov_3.005780_g67778_i0reverse_frame_3 - 0.052 13.7 1.1 0.054 13.7 1.1 1.0 1 0 0 1 1 1 0 Interferon alpha/beta domain CYTL1 PF15153.6 NODE_75718_length_208_cov_3.011561_g67777_i0reverse_frame_3 - 0.03 14.3 0.1 0.032 14.2 0.1 1.1 1 0 0 1 1 1 0 Cytokine-like protein 1 DUF4957 PF16318.5 NODE_75718_length_208_cov_3.011561_g67777_i0forward_frame_3 - 0.052 13.5 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) Corazonin PF17308.2 NODE_75717_length_208_cov_3.086705_g67776_i0forward_frame_2 - 0.077 13.4 0.0 0.082 13.3 0.0 1.1 1 0 0 1 1 1 0 Pro-corazonin DUF5466 PF17554.2 NODE_75716_length_208_cov_3.092486_g67775_i0reverse_frame_2 - 0.039 14.2 0.0 0.051 13.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5466) PAS_4 PF08448.10 NODE_75716_length_208_cov_3.092486_g67775_i0forward_frame_2 - 0.011 16.0 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 0 PAS fold Gemini_V2 PF01524.17 NODE_75716_length_208_cov_3.092486_g67775_i0forward_frame_2 - 0.079 13.2 0.3 1.1 9.5 0.1 1.9 1 1 1 2 2 2 0 Geminivirus V2 protein DUF4479 PF14794.6 NODE_75716_length_208_cov_3.092486_g67775_i0forward_frame_2 - 0.14 12.1 0.4 17 5.4 0.0 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4479) DUF2674 PF10879.8 NODE_75714_length_208_cov_3.306358_g67773_i0reverse_frame_3 - 0.13 11.8 0.0 0.53 9.9 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2674) Myotub-related PF06602.14 NODE_75714_length_208_cov_3.306358_g67773_i0forward_frame_2 - 0.0029 16.6 0.4 0.0036 16.3 0.4 1.1 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain DUF3578 PF12102.8 NODE_75712_length_208_cov_3.485549_g67771_i0reverse_frame_3 - 0.047 13.3 0.0 0.05 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3578) TraI_2 PF07514.11 NODE_75712_length_208_cov_3.485549_g67771_i0reverse_frame_3 - 0.074 12.0 0.1 0.076 12.0 0.1 1.0 1 0 0 1 1 1 0 Putative helicase Peripla_BP_4 PF13407.6 NODE_75711_length_208_cov_3.699422_g67770_i0forward_frame_3 - 3.1e-15 56.5 0.3 3.1e-15 56.4 0.3 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 NODE_75711_length_208_cov_3.699422_g67770_i0forward_frame_3 - 0.029 13.8 0.0 0.032 13.7 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family DUF4860 PF16152.5 NODE_75711_length_208_cov_3.699422_g67770_i0forward_frame_3 - 0.048 13.5 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4860) Phage_sheath_1C PF17482.2 NODE_75711_length_208_cov_3.699422_g67770_i0forward_frame_3 - 0.085 12.8 0.2 0.091 12.8 0.2 1.0 1 0 0 1 1 1 0 Phage tail sheath C-terminal domain RCC1_2 PF13540.6 NODE_75708_length_208_cov_3.982659_g67767_i0reverse_frame_3 - 0.1 12.4 2.2 5 7.1 0.0 2.3 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat DUF5437 PF17505.2 NODE_75708_length_208_cov_3.982659_g67767_i0forward_frame_2 - 0.67 10.0 4.3 6.6 6.9 1.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5437) YabA PF06156.13 NODE_75700_length_208_cov_16.549133_g67759_i0reverse_frame_2 - 0.096 13.3 0.1 0.11 13.2 0.1 1.3 1 1 0 1 1 1 0 Initiation control protein YabA PSCyt2 PF07583.11 NODE_75698_length_208_cov_23.901734_g67757_i0forward_frame_2 - 0.15 12.0 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1549) Afaf PF15339.6 NODE_75697_length_208_cov_24.601156_g67756_i0reverse_frame_2 - 0.047 13.4 0.5 0.048 13.4 0.5 1.0 1 0 0 1 1 1 0 Acrosome formation-associated factor OAD_gamma PF04277.13 NODE_75697_length_208_cov_24.601156_g67756_i0reverse_frame_2 - 3.1 8.4 5.5 1.7 9.3 2.6 1.8 1 1 1 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Hepatitis_core PF00906.20 NODE_75687_length_208_cov_36.520231_g67746_i0forward_frame_3 - 2.5 7.6 6.4 2.9 7.4 6.4 1.1 1 0 0 1 1 1 0 Hepatitis core antigen TIC20 PF16166.5 NODE_75686_length_208_cov_38.312139_g67745_i0forward_frame_3 - 0.2 11.4 5.9 0.2 11.4 5.9 1.0 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like SDH_sah PF01972.16 NODE_75682_length_208_cov_42.520231_g67741_i0reverse_frame_2 - 0.68 8.9 2.3 0.63 9.0 2.3 1.0 1 0 0 1 1 1 0 Serine dehydrogenase proteinase ABC_membrane PF00664.23 NODE_75682_length_208_cov_42.520231_g67741_i0forward_frame_3 - 0.00013 21.8 0.4 0.00014 21.6 0.4 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF4985 PF16373.5 NODE_75682_length_208_cov_42.520231_g67741_i0forward_frame_3 - 0.11 13.0 0.7 0.16 12.5 0.7 1.4 1 1 0 1 1 1 0 Domain of unknown function INCENP_ARK-bind PF03941.15 NODE_75678_length_208_cov_45.728324_g67737_i0reverse_frame_2 - 0.1 12.6 0.7 0.13 12.2 0.7 1.2 1 0 0 1 1 1 0 Inner centromere protein, ARK binding region P22_AR_N PF10547.9 NODE_75675_length_208_cov_48.416185_g67734_i0reverse_frame_2 - 0.031 14.6 0.0 0.042 14.2 0.0 1.3 1 0 0 1 1 1 0 P22_AR N-terminal domain WD40 PF00400.32 NODE_75674_length_208_cov_48.554913_g67733_i0forward_frame_3 - 3.9e-06 27.5 0.1 5.3e-06 27.1 0.1 1.2 1 0 0 1 1 1 1 WD domain, G-beta repeat Ribosomal_S2 PF00318.20 NODE_75673_length_208_cov_49.930636_g67732_i0forward_frame_3 - 0.11 11.7 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Ribosomal protein S2 CTV_P33 PF07184.11 NODE_75672_length_208_cov_50.277457_g67731_i0forward_frame_3 - 0.027 13.5 0.5 0.03 13.4 0.5 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein 3-alpha PF03475.14 NODE_75669_length_208_cov_50.676301_g67728_i0reverse_frame_2 - 0.059 13.3 0.1 0.082 12.8 0.1 1.2 1 0 0 1 1 1 0 3-alpha domain DUF4834 PF16118.5 NODE_75668_length_208_cov_52.132948_g67727_i0reverse_frame_3 - 0.055 14.4 1.6 0.065 14.2 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) YukC PF10140.9 NODE_75668_length_208_cov_52.132948_g67727_i0forward_frame_3 - 0.23 10.2 0.6 0.26 10.1 0.6 1.0 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Sigma_reg_N PF13800.6 NODE_75668_length_208_cov_52.132948_g67727_i0forward_frame_3 - 3.3 8.1 7.3 4.2 7.7 7.3 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal bPH_2 PF03703.14 NODE_75667_length_208_cov_53.138728_g67726_i0forward_frame_3 - 0.063 13.5 0.2 7.8 6.8 0.1 2.1 1 1 1 2 2 2 0 Bacterial PH domain RAI1 PF08652.11 NODE_75663_length_208_cov_61.502890_g67722_i0reverse_frame_2 - 0.03 14.5 0.1 0.036 14.3 0.1 1.2 1 0 0 1 1 1 0 RAI1 like PD-(D/E)XK nuclease PDDEXK_9 PF08011.11 NODE_75663_length_208_cov_61.502890_g67722_i0reverse_frame_2 - 0.039 13.8 0.0 0.043 13.7 0.0 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily DUF3432 PF11914.8 NODE_75660_length_208_cov_65.468208_g67719_i0forward_frame_3 - 0.012 15.8 2.2 0.016 15.5 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) ECR1_N PF14382.6 NODE_75660_length_208_cov_65.468208_g67719_i0forward_frame_3 - 0.085 12.7 2.0 4.3 7.2 0.1 2.2 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region CIAPIN1 PF05093.13 NODE_75660_length_208_cov_65.468208_g67719_i0forward_frame_2 - 0.03 14.8 4.7 1.2 9.7 0.1 2.1 1 1 1 2 2 2 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis zf-CCCH_7 PF18586.1 NODE_75660_length_208_cov_65.468208_g67719_i0forward_frame_2 - 3.8 7.9 5.9 12 6.3 0.3 2.1 1 1 1 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 DUF2795 PF11387.8 NODE_75652_length_208_cov_85.895954_g67711_i0reverse_frame_2 - 0.11 12.7 0.0 0.15 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2795) Varsurf_PPLC PF03490.13 NODE_75650_length_208_cov_93.254335_g67709_i0forward_frame_3 - 0.01 15.7 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C MID_MedPIWI PF18296.1 NODE_75650_length_208_cov_93.254335_g67709_i0forward_frame_3 - 0.056 13.2 0.2 0.064 13.0 0.2 1.1 1 0 0 1 1 1 0 MID domain of medPIWI PRCH PF03967.13 NODE_75649_length_208_cov_95.774566_g67708_i0forward_frame_3 - 0.062 13.5 0.6 0.064 13.5 0.6 1.1 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region DUF761 PF05553.11 NODE_75642_length_208_cov_176.895954_g67701_i0reverse_frame_2 - 0.036 13.6 0.2 0.051 13.1 0.2 1.2 1 0 0 1 1 1 0 Cotton fibre expressed protein DUF4043 PF13252.6 NODE_75642_length_208_cov_176.895954_g67701_i0forward_frame_2 - 0.25 10.4 0.0 0.27 10.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4043) Rad60-SLD_2 PF13881.6 NODE_75640_length_208_cov_197.427746_g67699_i0forward_frame_3 - 0.02 15.0 0.0 0.024 14.7 0.0 1.3 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Fijivirus_P9-2 PF06837.11 NODE_75638_length_208_cov_218.953757_g67697_i0reverse_frame_2 - 0.48 9.8 6.1 0.49 9.8 6.1 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein Acyl-CoA_dh_1 PF00441.24 NODE_75638_length_208_cov_218.953757_g67697_i0forward_frame_2 - 0.00045 20.5 0.2 0.00052 20.2 0.2 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain YL1_C PF08265.11 NODE_75634_length_208_cov_255.427746_g67693_i0reverse_frame_3 - 0.0068 16.1 0.1 0.01 15.6 0.1 1.2 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain NADH_4Fe-4S PF10589.9 NODE_75634_length_208_cov_255.427746_g67693_i0reverse_frame_2 - 0.019 15.1 1.8 0.025 14.6 1.8 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DUF1143 PF06608.11 NODE_75627_length_208_cov_7853.404624_g67686_i0reverse_frame_3 - 0.015 15.4 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) DUF1143 PF06608.11 NODE_75626_length_208_cov_7853.404624_g67685_i0reverse_frame_3 - 0.012 15.6 0.0 0.012 15.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) Ras PF00071.22 NODE_75623_length_208_cov_141714.780347_g67682_i0forward_frame_3 - 6e-08 32.4 0.2 7.3e-08 32.2 0.2 1.1 1 0 0 1 1 1 1 Ras family Orbi_VP5 PF00901.17 NODE_75623_length_208_cov_141714.780347_g67682_i0forward_frame_3 - 0.04 12.3 0.0 0.04 12.3 0.0 1.0 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP5 TIL PF01826.17 NODE_75623_length_208_cov_141714.780347_g67682_i0forward_frame_2 - 0.034 14.4 7.8 0.047 13.9 7.8 1.3 1 0 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain PP_kinase PF02503.17 NODE_75619_length_209_cov_0.867816_g67678_i0reverse_frame_2 - 0.26 10.8 0.1 0.33 10.5 0.1 1.0 1 0 0 1 1 1 0 Polyphosphate kinase middle domain PSI_integrin PF17205.3 NODE_75618_length_209_cov_0.879310_g67677_i0forward_frame_2 - 0.042 13.6 2.4 0.066 13.0 2.4 1.3 1 0 0 1 1 1 0 Integrin plexin domain NAD_Gly3P_dh_N PF01210.23 NODE_75616_length_209_cov_0.902299_g67675_i0forward_frame_2 - 0.15 12.0 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Mak10 PF04112.13 NODE_75610_length_209_cov_0.913793_g67669_i0reverse_frame_3 - 0.12 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Mak10 subunit, NatC N(alpha)-terminal acetyltransferase MID_MedPIWI PF18296.1 NODE_75606_length_209_cov_0.913793_g67665_i0forward_frame_3 - 0.12 12.1 0.2 0.13 12.0 0.2 1.2 1 0 0 1 1 1 0 MID domain of medPIWI DUF4641 PF15483.6 NODE_75606_length_209_cov_0.913793_g67665_i0forward_frame_3 - 0.14 11.2 0.0 0.17 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4641) CheW PF01584.19 NODE_75606_length_209_cov_0.913793_g67665_i0forward_frame_3 - 0.16 11.6 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 CheW-like domain Toxin_24 PF08094.11 NODE_75605_length_209_cov_0.913793_g67664_i0forward_frame_2 - 0.037 13.8 0.4 0.037 13.8 0.4 2.1 2 0 0 2 2 2 0 Conotoxin TVIIA/GS family PSP1 PF04468.12 NODE_75602_length_209_cov_0.913793_g67661_i0reverse_frame_2 - 0.17 12.2 0.3 0.2 12.0 0.3 1.1 1 0 0 1 1 1 0 PSP1 C-terminal conserved region AadA_C PF18280.1 NODE_75600_length_209_cov_0.919540_g67659_i0reverse_frame_2 - 0.039 14.1 0.1 0.046 13.9 0.1 1.2 1 0 0 1 1 1 0 Aminoglycoside adenyltransferase C-terminal domain Mac PF12464.8 NODE_75599_length_209_cov_0.919540_g67658_i0reverse_frame_3 - 0.027 14.7 1.8 1.4 9.2 0.2 2.1 1 1 1 2 2 2 0 Maltose acetyltransferase DUF1877 PF08974.10 NODE_75599_length_209_cov_0.919540_g67658_i0reverse_frame_3 - 0.053 13.6 3.0 0.074 13.1 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1877) DUF4972 PF16342.5 NODE_75599_length_209_cov_0.919540_g67658_i0reverse_frame_3 - 0.064 12.9 2.7 0.066 12.9 2.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) DUF5320 PF17253.2 NODE_75599_length_209_cov_0.919540_g67658_i0reverse_frame_3 - 0.24 12.5 1.4 0.28 12.3 1.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5320) NinE PF05322.11 NODE_75588_length_209_cov_0.919540_g67647_i0reverse_frame_3 - 0.089 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 NINE Protein DUF667 PF05018.13 NODE_75587_length_209_cov_0.919540_g67646_i0forward_frame_2 - 0.00076 19.3 1.0 0.00082 19.1 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) AMO PF02461.16 NODE_75587_length_209_cov_0.919540_g67646_i0forward_frame_2 - 0.01 15.7 0.4 0.011 15.6 0.4 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase NicO PF03824.16 NODE_75581_length_209_cov_0.919540_g67640_i0reverse_frame_3 - 9.3 5.5 11.0 9.4 5.5 11.0 1.0 1 0 0 1 1 1 0 High-affinity nickel-transport protein 4HBT PF03061.22 NODE_75578_length_209_cov_0.919540_g67637_i0reverse_frame_3 - 0.095 13.1 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Thioesterase superfamily T_Ag_DNA_bind PF02217.16 NODE_75575_length_209_cov_0.919540_g67634_i0reverse_frame_2 - 0.1 13.2 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 Origin of replication binding protein LodA_C PF18417.1 NODE_75575_length_209_cov_0.919540_g67634_i0forward_frame_3 - 0.041 13.6 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 L-lysine epsilon oxidase C-terminal domain CAAX_1 PF15895.5 NODE_75567_length_209_cov_0.977011_g67626_i0forward_frame_3 - 0.0099 15.8 5.8 0.011 15.7 5.8 1.1 1 0 0 1 1 1 1 CAAX box cerebral protein 1 DUF3403 PF11883.8 NODE_75561_length_209_cov_1.040230_g67620_i0reverse_frame_2 - 0.16 12.1 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3403) E6 PF00518.17 NODE_75558_length_209_cov_1.051724_g67617_i0reverse_frame_2 - 0.023 15.1 0.1 0.028 14.8 0.1 1.4 1 1 0 1 1 1 0 Early Protein (E6) Cys_rich_KTR PF14205.6 NODE_75558_length_209_cov_1.051724_g67617_i0reverse_frame_2 - 0.047 13.5 0.0 0.075 12.8 0.0 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR SR-25 PF10500.9 NODE_75554_length_209_cov_1.074713_g67613_i0forward_frame_2 - 1.5 8.4 8.5 1.3 8.5 8.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein mTERF PF02536.14 NODE_75547_length_209_cov_1.103448_g67606_i0reverse_frame_2 - 0.035 13.0 0.9 0.042 12.8 0.9 1.0 1 0 0 1 1 1 0 mTERF Lamprin PF06403.11 NODE_75546_length_209_cov_1.103448_g67605_i0reverse_frame_3 - 0.023 14.7 0.8 0.025 14.5 0.8 1.1 1 0 0 1 1 1 0 Lamprin CASP_C PF08172.12 NODE_75543_length_209_cov_1.137931_g67602_i0reverse_frame_2 - 0.0025 17.2 4.5 0.0025 17.2 4.5 1.1 1 0 0 1 1 1 1 CASP C terminal HTH_25 PF13413.6 NODE_75543_length_209_cov_1.137931_g67602_i0reverse_frame_2 - 0.11 12.4 0.1 0.16 11.8 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF848 PF05852.11 NODE_75543_length_209_cov_1.137931_g67602_i0reverse_frame_2 - 0.12 12.5 4.1 0.13 12.3 4.1 1.0 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) DUF295 PF03478.18 NODE_75542_length_209_cov_1.137931_g67601_i0forward_frame_2 - 0.044 13.4 0.1 0.05 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF295) Minor_tail_Z PF06763.11 NODE_75541_length_209_cov_1.143678_g67600_i0reverse_frame_3 - 0.096 12.5 0.0 0.096 12.5 0.0 1.0 1 0 0 1 1 1 0 Prophage minor tail protein Z (GPZ) CC PF04942.14 NODE_75538_length_209_cov_1.149425_g67597_i0reverse_frame_3 - 0.012 15.8 3.2 1.4 9.2 0.1 3.6 3 1 1 4 4 4 0 CC domain DUF35_N PF12172.8 NODE_75538_length_209_cov_1.149425_g67597_i0reverse_frame_3 - 0.18 11.7 3.8 0.68 9.9 0.1 2.4 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) NCD3G PF07562.14 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 0.00046 20.1 7.8 0.046 13.7 0.5 2.2 1 1 1 2 2 2 2 Nine Cysteines Domain of family 3 GPCR Ephrin_rec_like PF07699.13 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 0.044 13.6 15.8 0.19 11.5 14.1 2.5 1 1 0 1 1 1 0 Putative ephrin-receptor like FhuF_C PF11575.8 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 0.71 9.9 0.2 0.71 9.9 0.2 3.5 5 0 0 5 5 5 0 FhuF 2Fe-2S C-terminal domain Opy2 PF09463.10 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 0.73 10.2 13.8 0.24 11.7 1.2 2.8 2 1 0 2 2 2 0 Opy2 protein Prot_inhib_II PF02428.15 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 2.4 8.7 13.3 0.69 10.4 1.2 2.8 1 1 2 3 3 3 0 Potato type II proteinase inhibitor family LpxD PF04613.14 NODE_75537_length_209_cov_1.149425_g67596_i0reverse_frame_2 - 1.6 8.6 7.4 2.7 7.8 6.7 1.9 1 1 0 1 1 1 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Auts2 PF15336.6 NODE_75537_length_209_cov_1.149425_g67596_i0forward_frame_3 - 1.7 8.7 7.4 8.5 6.4 0.8 2.4 1 1 1 2 2 2 0 Autism susceptibility gene 2 protein Rubredoxin PF00301.20 NODE_75536_length_209_cov_1.149425_g67595_i0reverse_frame_2 - 0.32 11.1 5.4 0.48 10.5 5.4 1.5 1 1 0 1 1 1 0 Rubredoxin CODH_A_N PF18537.1 NODE_75534_length_209_cov_1.149425_g67593_i0reverse_frame_3 - 0.01 15.8 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 0 Carbon monoxide dehydrogenase subunit alpha N-terminal domain PAX PF00292.18 NODE_75531_length_209_cov_1.155172_g67590_i0forward_frame_2 - 0.11 12.4 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 'Paired box' domain zf-RING_10 PF16685.5 NODE_75527_length_209_cov_1.201149_g67586_i0forward_frame_2 - 0.0089 16.1 0.3 0.011 15.8 0.3 1.1 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf_Rg PF17915.1 NODE_75525_length_209_cov_1.206897_g67584_i0reverse_frame_3 - 0.081 12.3 0.1 0.14 11.6 0.1 1.3 1 0 0 1 1 1 0 Reverse gyrase zinc finger DUF817 PF05675.12 NODE_75525_length_209_cov_1.206897_g67584_i0forward_frame_3 - 0.17 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF817) DUF1338 PF07063.13 NODE_75522_length_209_cov_1.247126_g67581_i0reverse_frame_3 - 0.15 11.2 0.0 0.18 11.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) DUF1598 PF07643.11 NODE_75522_length_209_cov_1.247126_g67581_i0forward_frame_3 - 0.0074 16.5 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1598) Podoplanin PF05808.11 NODE_75521_length_209_cov_1.252874_g67580_i0forward_frame_3 - 0.0026 17.9 3.0 0.0027 17.8 3.0 1.0 1 0 0 1 1 1 1 Podoplanin Glycophorin_A PF01102.18 NODE_75521_length_209_cov_1.252874_g67580_i0forward_frame_3 - 0.0089 16.3 0.2 0.0095 16.2 0.2 1.1 1 0 0 1 1 1 1 Glycophorin A TMEM154 PF15102.6 NODE_75521_length_209_cov_1.252874_g67580_i0forward_frame_3 - 0.011 15.7 2.2 0.011 15.6 2.2 1.0 1 0 0 1 1 1 0 TMEM154 protein family CPSase_L_D2 PF02786.17 NODE_75518_length_209_cov_1.270115_g67577_i0reverse_frame_2 - 9e-24 84.1 0.0 9.7e-24 84.0 0.0 1.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Mito_carr PF00153.27 NODE_75515_length_209_cov_1.298851_g67574_i0reverse_frame_3 - 1.5e-05 24.8 0.3 1.7e-05 24.6 0.3 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein FixP_N PF14715.6 NODE_75515_length_209_cov_1.298851_g67574_i0reverse_frame_3 - 0.091 12.5 0.3 0.13 12.0 0.3 1.2 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP SOCS_box PF07525.16 NODE_75513_length_209_cov_1.327586_g67572_i0forward_frame_2 - 0.003 17.9 3.0 0.003 17.9 3.0 1.6 2 0 0 2 2 2 1 SOCS box Antimicrobial11 PF08106.11 NODE_75506_length_209_cov_1.362069_g67565_i0reverse_frame_3 - 0.19 11.8 2.1 0.19 11.8 2.1 2.2 3 0 0 3 3 3 0 Formaecin family DUF3915 PF13054.6 NODE_75504_length_209_cov_1.367816_g67563_i0reverse_frame_2 - 0.13 12.3 0.2 0.13 12.2 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Transglut_core2 PF13369.6 NODE_75504_length_209_cov_1.367816_g67563_i0forward_frame_2 - 0.02 14.5 0.0 0.022 14.3 0.0 1.0 1 0 0 1 1 1 0 Transglutaminase-like superfamily YwqJ-deaminase PF14431.6 NODE_75503_length_209_cov_1.367816_g67562_i0forward_frame_2 - 0.099 12.8 0.3 0.11 12.6 0.3 1.0 1 0 0 1 1 1 0 YwqJ-like deaminase GSAP-16 PF14959.6 NODE_75497_length_209_cov_1.379310_g67556_i0reverse_frame_2 - 0.036 14.0 0.1 0.051 13.5 0.1 1.4 1 1 0 1 1 1 0 gamma-Secretase-activating protein C-term RB_B PF01857.20 NODE_75494_length_209_cov_1.379310_g67553_i0forward_frame_3 - 0.13 12.3 1.5 0.15 12.1 1.5 1.1 1 0 0 1 1 1 0 Retinoblastoma-associated protein B domain LacAB_rpiB PF02502.18 NODE_75491_length_209_cov_1.379310_g67550_i0forward_frame_3 - 0.0083 16.1 0.0 0.0087 16.0 0.0 1.0 1 0 0 1 1 1 1 Ribose/Galactose Isomerase zf-FLZ PF04570.14 NODE_75489_length_209_cov_1.379310_g67548_i0forward_frame_3 - 0.055 12.9 0.0 0.074 12.5 0.0 1.2 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 Pilin_GH PF16734.5 NODE_75482_length_209_cov_1.396552_g67541_i0reverse_frame_2 - 0.049 14.0 0.0 0.056 13.8 0.0 1.0 1 0 0 1 1 1 0 Type IV pilin-like G and H, putative Fungal_trans_2 PF11951.8 NODE_75481_length_209_cov_1.402299_g67540_i0reverse_frame_2 - 0.027 13.3 0.6 0.029 13.2 0.6 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain MCH PF02289.16 NODE_75473_length_209_cov_1.442529_g67532_i0forward_frame_2 - 0.12 11.6 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 Cyclohydrolase (MCH) Arm-DNA-bind_2 PF12167.8 NODE_75471_length_209_cov_1.448276_g67530_i0reverse_frame_3 - 0.05 13.5 2.1 0.075 13.0 2.1 1.2 1 0 0 1 1 1 0 Arm DNA-binding domain PBP1_TM PF14812.6 NODE_75471_length_209_cov_1.448276_g67530_i0reverse_frame_2 - 0.18 12.2 6.2 0.2 12.0 6.2 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal FAM176 PF14851.6 NODE_75471_length_209_cov_1.448276_g67530_i0reverse_frame_2 - 0.46 10.1 2.6 0.47 10.1 2.6 1.1 1 0 0 1 1 1 0 FAM176 family Saf_2TM PF18303.1 NODE_75471_length_209_cov_1.448276_g67530_i0forward_frame_2 - 0.24 11.0 1.7 0.28 10.8 1.7 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain PikAIV_N PF18605.1 NODE_75470_length_209_cov_1.448276_g67529_i0reverse_frame_3 - 0.046 13.3 0.5 0.069 12.7 0.5 1.3 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Med3 PF11593.8 NODE_75468_length_209_cov_1.465517_g67527_i0reverse_frame_3 - 6.2 5.9 8.1 6.2 5.9 8.1 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Adeno_PIX PF03955.14 NODE_75468_length_209_cov_1.465517_g67527_i0forward_frame_2 - 0.38 10.9 2.8 1.8 8.8 2.8 1.8 1 1 0 1 1 1 0 Adenovirus hexon-associated protein (IX) H2TH PF06831.14 NODE_75467_length_209_cov_1.471264_g67526_i0forward_frame_2 - 2e-09 37.3 0.0 2.2e-09 37.2 0.0 1.0 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain DUF725 PF05267.12 NODE_75466_length_209_cov_1.477011_g67525_i0reverse_frame_3 - 0.021 14.8 0.5 0.025 14.5 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF725) PolyG_pol PF01518.16 NODE_75464_length_209_cov_1.494253_g67523_i0reverse_frame_3 - 0.12 11.1 0.0 0.14 10.9 0.0 1.0 1 0 0 1 1 1 0 Sigma NS protein Doppel PF11466.8 NODE_75460_length_209_cov_1.528736_g67519_i0forward_frame_3 - 0.077 12.7 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Prion-like protein Doppel DUF3958 PF13125.6 NODE_75459_length_209_cov_1.540230_g67518_i0reverse_frame_2 - 0.004 17.3 0.8 0.0043 17.2 0.8 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF3958) GIT_CC PF16559.5 NODE_75459_length_209_cov_1.540230_g67518_i0reverse_frame_2 - 0.023 14.6 0.4 0.038 13.8 0.4 1.4 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor HTH_50 PF18024.1 NODE_75459_length_209_cov_1.540230_g67518_i0reverse_frame_2 - 0.084 12.5 0.1 0.16 11.6 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain Kinesin PF00225.23 NODE_75454_length_209_cov_1.551724_g67513_i0forward_frame_2 - 4.4e-21 75.2 0.2 4.6e-21 75.1 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_75454_length_209_cov_1.551724_g67513_i0forward_frame_2 - 2.3e-15 56.8 0.0 2.4e-15 56.7 0.0 1.0 1 0 0 1 1 1 1 Microtubule binding AAA_7 PF12775.7 NODE_75454_length_209_cov_1.551724_g67513_i0forward_frame_2 - 0.0075 15.8 0.0 0.0082 15.7 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region tRNA_bind PF01588.20 NODE_75453_length_209_cov_1.557471_g67512_i0forward_frame_3 - 0.034 14.3 0.0 0.045 13.9 0.0 1.1 1 0 0 1 1 1 0 Putative tRNA binding domain YdjM PF04307.14 NODE_75450_length_209_cov_1.586207_g67509_i0reverse_frame_2 - 0.11 11.8 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase ELMO_CED12 PF04727.13 NODE_75444_length_209_cov_1.603448_g67503_i0forward_frame_3 - 1.2e-14 54.8 0.0 1.2e-14 54.8 0.0 1.0 1 0 0 1 1 1 1 ELMO/CED-12 family Lamprin PF06403.11 NODE_75438_length_209_cov_1.626437_g67497_i0forward_frame_3 - 0.049 13.6 1.7 0.056 13.4 1.7 1.0 1 0 0 1 1 1 0 Lamprin Hormone_4 PF00220.17 NODE_75437_length_209_cov_1.643678_g67496_i0forward_frame_2 - 0.012 15.5 1.5 0.029 14.3 1.5 1.6 1 0 0 1 1 1 0 Neurohypophysial hormones, N-terminal Domain GP3 PF03076.14 NODE_75436_length_209_cov_1.655172_g67495_i0reverse_frame_3 - 0.012 15.7 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Equine arteritis virus GP3 Transformer PF06495.11 NODE_75436_length_209_cov_1.655172_g67495_i0reverse_frame_2 - 3.1 7.8 16.0 3.5 7.7 16.0 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein Presenilin PF01080.17 NODE_75436_length_209_cov_1.655172_g67495_i0reverse_frame_2 - 8.9 5.0 8.8 8.5 5.0 8.8 1.0 1 0 0 1 1 1 0 Presenilin DUF4131 PF13567.6 NODE_75435_length_209_cov_1.655172_g67494_i0reverse_frame_2 - 5.4 6.6 6.0 5.7 6.5 6.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) COX2_TM PF02790.15 NODE_75434_length_209_cov_1.660920_g67493_i0reverse_frame_3 - 0.11 12.7 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain LRR_1 PF00560.33 NODE_75423_length_209_cov_1.741379_g67482_i0reverse_frame_2 - 0.14 12.8 3.8 0.32 11.7 3.8 1.8 1 1 0 1 1 1 0 Leucine Rich Repeat LRR_4 PF12799.7 NODE_75423_length_209_cov_1.741379_g67482_i0reverse_frame_2 - 0.18 12.3 7.1 0.1 13.0 5.1 1.6 1 1 1 2 2 2 0 Leucine Rich repeats (2 copies) V-set PF07686.17 NODE_75421_length_209_cov_1.758621_g67480_i0reverse_frame_2 - 0.074 13.2 0.6 0.087 13.0 0.6 1.0 1 0 0 1 1 1 0 Immunoglobulin V-set domain BMF PF15185.6 NODE_75419_length_209_cov_1.764368_g67478_i0forward_frame_3 - 0.037 13.8 0.2 0.04 13.6 0.2 1.0 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis FbpC_C_terminal PF17845.1 NODE_75409_length_209_cov_1.821839_g67468_i0reverse_frame_2 - 0.1 12.8 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 FbpC C-terminal regulatory nucleotide binding domain RVT_N PF13655.6 NODE_75408_length_209_cov_1.821839_g67467_i0forward_frame_3 - 0.029 14.6 0.4 0.033 14.4 0.4 1.1 1 0 0 1 1 1 0 N-terminal domain of reverse transcriptase SPASM PF13186.6 NODE_75405_length_209_cov_1.833333_g67464_i0reverse_frame_2 - 1.1e-05 25.8 0.3 1.7e-05 25.2 0.3 1.3 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain DUF3641 PF12345.8 NODE_75405_length_209_cov_1.833333_g67464_i0reverse_frame_2 - 0.003 17.6 0.1 0.003 17.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3641) Torus PF16131.5 NODE_75398_length_209_cov_1.873563_g67457_i0forward_frame_3 - 0.00049 20.8 0.8 0.00051 20.7 0.8 1.1 1 0 0 1 1 1 1 Torus domain DUF3141 PF11339.8 NODE_75398_length_209_cov_1.873563_g67457_i0forward_frame_3 - 0.23 9.8 0.0 0.25 9.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3141) Mucin_bdg PF03272.13 NODE_75394_length_209_cov_1.896552_g67453_i0forward_frame_2 - 0.052 13.6 0.1 0.053 13.6 0.1 1.1 1 0 0 1 1 1 0 Putative mucin or carbohydrate-binding module SlyX PF04102.12 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.0059 17.2 7.6 0.0072 16.9 7.6 1.2 1 0 0 1 1 1 1 SlyX Topoisom_I PF01028.20 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.0078 15.5 6.2 0.0089 15.3 6.2 1.0 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core ALIX_LYPXL_bnd PF13949.6 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.025 13.9 8.3 0.029 13.7 8.3 1.0 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV Phage_GP20 PF06810.11 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.039 13.8 7.0 0.041 13.7 7.0 1.0 1 0 0 1 1 1 0 Phage minor structural protein GP20 XhlA PF10779.9 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.095 12.9 6.5 0.13 12.5 4.5 1.8 1 1 1 2 2 2 0 Haemolysin XhlA K1 PF02960.14 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.1 12.7 1.4 0.13 12.4 1.4 1.1 1 0 0 1 1 1 0 K1 glycoprotein Tup_N PF08581.10 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.16 12.3 11.2 0.19 12.1 11.2 1.2 1 0 0 1 1 1 0 Tup N-terminal Rho_Binding PF08912.11 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.17 12.8 11.4 0.22 12.4 11.4 1.1 1 0 0 1 1 1 0 Rho Binding Cluap1 PF10234.9 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.18 11.2 9.5 0.2 11.0 9.5 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 TMPIT PF07851.13 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.23 10.7 8.9 0.26 10.5 8.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein DivIC PF04977.15 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.36 10.6 6.6 0.65 9.8 6.4 1.4 1 1 0 1 1 1 0 Septum formation initiator Macoilin PF09726.9 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.37 9.3 12.2 0.41 9.1 12.2 1.0 1 0 0 1 1 1 0 Macoilin family DUF3953 PF13129.6 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.56 10.0 0.1 0.56 10.0 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3953) Atg14 PF10186.9 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.93 8.5 8.3 1.1 8.3 8.3 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4446 PF14584.6 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 1.3 9.0 6.4 0.59 10.1 4.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) DUF4407 PF14362.6 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 3.1 7.0 6.1 3.4 6.9 6.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) 60KD_IMP PF02096.20 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 6.2 6.7 6.9 7.5 6.4 6.9 1.1 1 0 0 1 1 1 0 60Kd inner membrane protein PHM7_cyt PF14703.6 NODE_75391_length_209_cov_1.931034_g67450_i0forward_frame_3 - 5.6e-05 23.5 0.1 6.1e-05 23.3 0.1 1.0 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter MADF_DNA_bdg PF10545.9 NODE_75381_length_209_cov_2.040230_g67440_i0reverse_frame_3 - 0.029 14.7 0.8 0.034 14.5 0.8 1.1 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like TTD PF12148.8 NODE_75380_length_209_cov_2.051724_g67439_i0reverse_frame_2 - 0.24 11.2 2.2 5 7.0 0.0 2.0 1 1 1 2 2 2 0 Tandem tudor domain within UHRF1 RVT_1 PF00078.27 NODE_75379_length_209_cov_2.051724_g67438_i0reverse_frame_3 - 0.0025 17.4 0.0 0.0029 17.2 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Aminotran_1_2 PF00155.21 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 1.5e-14 53.9 0.0 1.5e-14 53.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 0.038 12.9 0.0 0.043 12.8 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class-V Beta_elim_lyase PF01212.21 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 0.039 13.2 0.0 0.042 13.1 0.0 1.0 1 0 0 1 1 1 0 Beta-eliminating lyase Aminotran_MocR PF12897.7 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 0.043 12.6 0.0 0.043 12.6 0.0 1.0 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Cys_Met_Meta_PP PF01053.20 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 0.077 11.5 0.0 0.083 11.4 0.0 1.0 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks357.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks357.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks357.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks357.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:22:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PHY PF00360.20 NODE_75374_length_209_cov_2.114943_g67433_i0reverse_frame_3 - 0.21 10.9 0.0 0.24 10.7 0.0 1.0 1 0 0 1 1 1 0 Phytochrome region Dimer_Tnp_Tn5 PF02281.16 NODE_75372_length_209_cov_2.155172_g67431_i0forward_frame_3 - 0.16 11.7 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Transposase Tn5 dimerisation domain HPIP PF15226.6 NODE_75369_length_209_cov_2.178161_g67428_i0forward_frame_3 - 0.3 11.5 1.5 0.33 11.4 1.5 1.1 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family CCAP PF11105.8 NODE_75367_length_209_cov_2.183908_g67426_i0forward_frame_3 - 0.11 12.4 0.3 0.14 12.1 0.3 1.2 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a DUF4083 PF13314.6 NODE_75367_length_209_cov_2.183908_g67426_i0forward_frame_3 - 0.5 10.3 2.3 0.65 10.0 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Host_attach PF10116.9 NODE_75366_length_209_cov_2.218391_g67425_i0reverse_frame_2 - 0.17 12.5 3.1 0.2 12.2 3.1 1.1 1 0 0 1 1 1 0 Protein required for attachment to host cells CZB PF13682.6 NODE_75365_length_209_cov_2.224138_g67424_i0forward_frame_2 - 0.00025 21.4 0.1 0.00028 21.3 0.1 1.2 1 0 0 1 1 1 1 Chemoreceptor zinc-binding domain MotCF PF09158.10 NODE_75364_length_209_cov_2.241379_g67423_i0reverse_frame_2 - 0.02 14.9 0.1 0.021 14.8 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage T4 MotA, C-terminal FSAP_sig_propep PF03032.15 NODE_75364_length_209_cov_2.241379_g67423_i0forward_frame_3 - 0.063 13.3 1.2 0.12 12.4 1.2 1.6 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide GTP_cyclohydro2 PF00925.20 NODE_75355_length_209_cov_2.379310_g67414_i0forward_frame_2 - 1.9e-28 99.1 0.1 2e-28 99.0 0.1 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase II MapZ_EC1 PF18041.1 NODE_75353_length_209_cov_2.465517_g67412_i0reverse_frame_3 - 0.045 14.0 0.2 0.055 13.7 0.2 1.1 1 0 0 1 1 1 0 MapZ extracellular domain 1 MORN PF02493.20 NODE_75351_length_209_cov_2.517241_g67410_i0reverse_frame_3 - 0.069 13.1 7.3 2.1 8.4 0.1 2.6 2 1 1 3 3 3 0 MORN repeat Ras PF00071.22 NODE_75348_length_209_cov_2.591954_g67407_i0reverse_frame_3 - 1.6e-12 47.3 0.0 1.7e-12 47.3 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_75348_length_209_cov_2.591954_g67407_i0reverse_frame_3 - 0.01 16.1 0.0 0.016 15.4 0.0 1.3 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase DUF3862 PF12978.7 NODE_75343_length_209_cov_2.712644_g67402_i0reverse_frame_2 - 0.07 13.0 0.0 0.076 12.8 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3862) S_2TMBeta PF18153.1 NODE_75342_length_209_cov_2.741379_g67401_i0forward_frame_2 - 0.0055 16.5 0.0 0.0065 16.3 0.0 1.0 1 0 0 1 1 1 1 SMODS-associating 2TM, beta-strand rich effector domain ResB PF05140.14 NODE_75333_length_209_cov_3.120690_g67392_i0reverse_frame_3 - 0.012 14.4 0.1 0.012 14.3 0.1 1.0 1 0 0 1 1 1 0 ResB-like family Pigment_DH PF06324.11 NODE_75330_length_209_cov_3.402299_g67389_i0reverse_frame_3 - 0.091 12.9 0.5 14 6.1 0.1 2.3 2 0 0 2 2 2 0 Pigment-dispersing hormone (PDH) QueC PF06508.13 NODE_75330_length_209_cov_3.402299_g67389_i0reverse_frame_3 - 0.18 11.3 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Rax2 PF12768.7 NODE_75329_length_209_cov_3.465517_g67388_i0reverse_frame_2 - 0.11 12.0 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Gemin6 PF06372.12 NODE_75327_length_209_cov_3.551724_g67386_i0forward_frame_3 - 0.15 11.6 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Gemin6 protein HCV_NS2 PF01538.18 NODE_75325_length_209_cov_3.666667_g67384_i0reverse_frame_3 - 0.061 13.0 1.0 0.062 13.0 1.0 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 Peptidase_M16_M PF16187.5 NODE_75325_length_209_cov_3.666667_g67384_i0reverse_frame_2 - 6.4e-10 38.8 0.2 6.9e-10 38.7 0.2 1.0 1 0 0 1 1 1 1 Middle or third domain of peptidase_M16 RsgA_GTPase PF03193.16 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.00066 19.6 0.0 0.00098 19.1 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.0023 17.6 0.0 0.0035 17.0 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.071 13.6 0.0 0.075 13.5 0.0 1.1 1 0 0 1 1 1 0 ABC transporter AAA_22 PF13401.6 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.079 13.2 0.0 0.087 13.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF4902 PF16245.5 NODE_75323_length_209_cov_3.764368_g67382_i0forward_frame_3 - 0.23 11.4 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4902) CcdB PF01845.17 NODE_75321_length_209_cov_4.683908_g67380_i0reverse_frame_3 - 0.19 12.0 0.1 0.21 11.8 0.1 1.3 1 1 0 1 1 1 0 CcdB protein Histone_H2A_C PF16211.5 NODE_75318_length_209_cov_8.448276_g67377_i0reverse_frame_3 - 0.041 13.6 3.9 0.06 13.1 3.9 1.2 1 0 0 1 1 1 0 C-terminus of histone H2A DUF5552 PF17706.1 NODE_75317_length_209_cov_14.419540_g67376_i0reverse_frame_2 - 0.053 13.2 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5552) MscS_TM PF12794.7 NODE_75315_length_209_cov_18.603448_g67374_i0forward_frame_2 - 5.5 5.8 5.9 5.7 5.7 5.9 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF3648 PF12364.8 NODE_75308_length_209_cov_30.660920_g67367_i0forward_frame_3 - 0.071 13.3 0.2 0.084 13.1 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3648) Plant_zn_clust PF10533.9 NODE_75304_length_209_cov_33.454023_g67363_i0forward_frame_3 - 0.24 11.4 6.7 5.5 7.1 0.0 2.1 2 0 0 2 2 2 0 Plant zinc cluster domain DUF1818 PF08848.11 NODE_75303_length_209_cov_34.080460_g67362_i0reverse_frame_3 - 0.045 13.8 0.0 0.054 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1818) zf-CW PF07496.15 NODE_75303_length_209_cov_34.080460_g67362_i0reverse_frame_3 - 0.056 13.5 0.1 0.084 12.9 0.1 1.3 1 0 0 1 1 1 0 CW-type Zinc Finger Spo7 PF03907.13 NODE_75303_length_209_cov_34.080460_g67362_i0reverse_frame_2 - 0.029 13.8 0.1 0.029 13.8 0.1 1.0 1 0 0 1 1 1 0 Spo7-like protein DUF5093 PF17011.5 NODE_75303_length_209_cov_34.080460_g67362_i0reverse_frame_2 - 0.15 12.4 3.3 0.17 12.2 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5093) Babuvirus_MP PF07234.11 NODE_75302_length_209_cov_35.591954_g67361_i0reverse_frame_3 - 1.6 8.9 8.0 2.3 8.4 8.1 1.4 1 1 0 1 1 1 0 Movement and RNA silencing protein TilS_C PF11734.8 NODE_75299_length_209_cov_37.620690_g67358_i0reverse_frame_2 - 0.02 14.3 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 TilS substrate C-terminal domain PHtD_u1 PF16645.5 NODE_75296_length_209_cov_41.275862_g67355_i0forward_frame_2 - 0.052 14.0 0.0 0.066 13.6 0.0 1.2 1 0 0 1 1 1 0 Unstructured region on Pneumococcal histidine triad protein MYCBPAP PF14646.6 NODE_75292_length_209_cov_45.810345_g67351_i0reverse_frame_2 - 0.022 13.7 0.3 0.022 13.7 0.3 1.0 1 0 0 1 1 1 0 MYCBP-associated protein family Tricorn_PDZ PF14685.6 NODE_75289_length_209_cov_47.413793_g67348_i0reverse_frame_2 - 0.13 12.3 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Tricorn protease PDZ domain Met_asp_mut_E PF06368.11 NODE_75289_length_209_cov_47.413793_g67348_i0forward_frame_3 - 0.1 11.1 0.0 0.12 10.9 0.0 1.0 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) TEBP_beta PF07404.11 NODE_75289_length_209_cov_47.413793_g67348_i0forward_frame_2 - 0.088 12.1 0.0 0.097 12.0 0.0 1.0 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) Gene66 PF02053.15 NODE_75284_length_209_cov_52.218391_g67343_i0reverse_frame_3 - 0.091 12.4 0.2 0.092 12.4 0.2 1.1 1 0 0 1 1 1 0 Gene 66 (IR5) protein UPF0179 PF03684.13 NODE_75284_length_209_cov_52.218391_g67343_i0forward_frame_2 - 0.15 12.0 0.9 0.25 11.2 0.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0179) FNIP PF05725.12 NODE_75281_length_209_cov_53.017241_g67340_i0forward_frame_3 - 4.3e-09 36.4 0.1 5e-09 36.2 0.1 1.1 1 0 0 1 1 1 1 FNIP Repeat Retrotrans_gag PF03732.17 NODE_75276_length_209_cov_63.425287_g67335_i0reverse_frame_2 - 0.087 13.1 0.3 0.2 12.0 0.3 1.6 1 1 1 2 2 2 0 Retrotransposon gag protein YkuD_2 PF13645.6 NODE_75272_length_209_cov_64.959770_g67331_i0forward_frame_2 - 0.092 12.2 0.1 0.1 12.0 0.1 1.0 1 0 0 1 1 1 0 L,D-transpeptidase catalytic domain PdxJ PF03740.13 NODE_75267_length_209_cov_70.471264_g67326_i0forward_frame_3 - 0.051 12.7 0.0 0.052 12.6 0.0 1.0 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthesis protein PdxJ DUF4763 PF15960.5 NODE_75263_length_209_cov_84.149425_g67322_i0forward_frame_3 - 0.014 14.7 0.0 0.014 14.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Amino_oxidase PF01593.24 NODE_75262_length_209_cov_91.977011_g67321_i0reverse_frame_2 - 0.00089 18.7 0.1 0.0011 18.3 0.1 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase HemY_N PF07219.13 NODE_75253_length_209_cov_217.885057_g67312_i0forward_frame_2 - 0.55 10.4 1.8 0.68 10.2 1.8 1.1 1 0 0 1 1 1 0 HemY protein N-terminus TetR_C_32 PF09209.11 NODE_75252_length_209_cov_218.482759_g67311_i0forward_frame_2 - 0.0039 17.2 0.1 0.0045 17.0 0.1 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain Dicistro_VP4 PF11492.8 NODE_75250_length_209_cov_240.224138_g67309_i0forward_frame_3 - 0.15 12.0 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Cricket paralysis virus, VP4 DUF5561 PF17716.1 NODE_75248_length_209_cov_371.333333_g67307_i0reverse_frame_2 - 0.072 12.4 0.1 0.08 12.2 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5561) zf-H2C2_2 PF13465.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 1.1e-17 63.6 9.1 1.3e-10 41.2 1.4 2.1 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 6e-09 35.9 12.6 1.3e-06 28.6 0.5 3.1 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 6e-07 29.8 13.1 3.6e-05 24.2 0.7 3.1 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_5 PF13909.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.00035 20.3 0.4 0.00035 20.3 0.4 3.4 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_11 PF16622.5 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0006 19.5 5.4 0.063 13.0 0.2 2.2 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-BED PF02892.15 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0052 16.8 9.0 0.063 13.3 2.4 2.2 1 1 1 2 2 2 2 BED zinc finger zf-met PF12874.7 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0063 16.9 5.2 0.026 14.9 0.7 2.4 2 0 0 2 2 2 1 Zinc-finger of C2H2 type DUF2225 PF09986.9 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0066 16.2 4.3 0.0078 16.0 4.3 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2225) BolA PF01722.18 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0083 16.4 0.2 0.018 15.3 0.2 1.6 1 1 1 2 2 2 1 BolA-like protein Zf_RING PF16744.5 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.013 15.6 3.6 0.036 14.2 1.8 2.0 1 1 1 2 2 2 0 KIAA1045 RING finger MRNIP PF15749.5 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.066 13.9 9.6 0.74 10.6 1.1 2.1 1 1 1 2 2 2 0 MRN-interacting protein DUF5479 PF17575.2 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.072 13.6 0.7 0.11 13.0 0.7 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5479) zf-C2HC_2 PF13913.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.086 12.8 0.9 0.086 12.8 0.9 2.6 3 1 0 3 3 3 0 zinc-finger of a C2HC-type zf-C2H2_3rep PF18868.1 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.11 13.2 3.7 27 5.4 0.4 1.8 1 1 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_6 PF13912.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.13 12.3 6.0 0.46 10.6 0.2 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.15 12.3 9.1 0.4 11.0 0.4 2.9 2 1 1 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-C2H2_8 PF15909.5 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.21 11.9 5.4 0.085 13.2 1.9 1.7 1 1 0 1 1 1 0 C2H2-type zinc ribbon zf-CCHC_2 PF13696.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.77 9.6 4.9 5 7.0 1.1 2.2 2 0 0 2 2 2 0 Zinc knuckle Desulfoferrod_N PF06397.12 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.9 9.2 3.6 5.8 6.6 0.2 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain MHC_I_C PF06623.11 NODE_75243_length_209_cov_986.132184_g67302_i0reverse_frame_2 - 0.13 12.2 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 MHC_I C-terminus EIF4E-T PF10477.9 NODE_75243_length_209_cov_986.132184_g67302_i0reverse_frame_2 - 0.14 10.9 0.1 0.14 10.9 0.1 1.0 1 0 0 1 1 1 0 Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E DUF1143 PF06608.11 NODE_75242_length_209_cov_7808.229885_g67301_i0reverse_frame_3 - 0.015 15.4 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) PT PF04886.12 NODE_75237_length_210_cov_0.828571_g67296_i0reverse_frame_2 - 0.0056 16.2 1.2 1.1 8.8 0.1 2.3 2 0 0 2 2 2 2 PT repeat Smoa_sbd PF17885.1 NODE_75236_length_210_cov_0.874286_g67295_i0forward_frame_2 - 0.1 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Styrene monooxygenase A putative substrate binding domain DUF4487 PF14868.6 NODE_75230_length_210_cov_0.908571_g67289_i0forward_frame_2 - 0.13 11.0 4.0 0.15 10.8 4.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4487) Phage_fiber PF03335.13 NODE_75229_length_210_cov_0.908571_g67288_i0reverse_frame_2 - 4.7 7.6 11.4 1.3 9.3 0.6 2.6 2 0 0 2 2 2 0 Phage tail fibre repeat DUF2633 PF11119.8 NODE_75229_length_210_cov_0.908571_g67288_i0forward_frame_2 - 3.3 7.7 4.1 3.7 7.5 2.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2633) Multi-haem_cyto PF13447.6 NODE_75228_length_210_cov_0.908571_g67287_i0reverse_frame_2 - 0.011 15.1 0.2 0.012 14.8 0.2 1.0 1 0 0 1 1 1 0 Seven times multi-haem cytochrome CxxCH Mlo PF03094.15 NODE_75222_length_210_cov_0.914286_g67281_i0forward_frame_2 - 0.11 10.9 1.5 0.11 10.9 1.5 1.0 1 0 0 1 1 1 0 Mlo family DUF3915 PF13054.6 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_3 - 0.16 12.0 0.8 0.19 11.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_3 - 0.35 9.1 2.1 0.34 9.1 2.1 1.0 1 0 0 1 1 1 0 Atrophin-1 family Acyl-CoA_ox_N PF14749.6 NODE_75219_length_210_cov_0.914286_g67278_i0forward_frame_2 - 0.00066 20.2 0.0 0.00075 20.0 0.0 1.0 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal DUF4113 PF13438.6 NODE_75212_length_210_cov_0.914286_g67271_i0reverse_frame_3 - 6.8 6.9 7.0 1.5 9.0 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4113) Ten1_2 PF15490.6 NODE_75210_length_210_cov_0.914286_g67269_i0reverse_frame_2 - 0.019 14.6 0.0 0.022 14.5 0.0 1.0 1 0 0 1 1 1 0 Telomere-capping, CST complex subunit DUF2290 PF10053.9 NODE_75207_length_210_cov_0.920000_g67266_i0reverse_frame_3 - 0.013 15.0 0.0 0.014 14.8 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2290) Stomoxyn PF11585.8 NODE_75205_length_210_cov_0.948571_g67264_i0reverse_frame_3 - 0.13 12.3 0.3 0.19 11.8 0.3 1.3 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn SdrG_C_C PF10425.9 NODE_75205_length_210_cov_0.948571_g67264_i0reverse_frame_2 - 0.011 15.8 0.9 0.012 15.7 0.9 1.0 1 0 0 1 1 1 0 C-terminus of bacterial fibrinogen-binding adhesin CLU_N PF15044.6 NODE_75205_length_210_cov_0.948571_g67264_i0reverse_frame_2 - 0.031 14.6 0.2 0.037 14.4 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial function, CLU-N-term B3_4 PF03483.17 NODE_75204_length_210_cov_0.965714_g67263_i0forward_frame_2 - 0.034 13.8 0.4 0.042 13.5 0.4 1.3 1 1 0 1 1 1 0 B3/4 domain MSC PF09402.10 NODE_75202_length_210_cov_0.977143_g67261_i0reverse_frame_2 - 0.024 14.1 0.4 0.024 14.1 0.4 1.1 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain EGF_MSP1_1 PF12946.7 NODE_75202_length_210_cov_0.977143_g67261_i0reverse_frame_2 - 0.1 12.6 3.1 0.3 11.2 3.1 1.7 1 1 0 1 1 1 0 MSP1 EGF domain 1 TFX_C PF14601.6 NODE_75199_length_210_cov_1.028571_g67258_i0reverse_frame_2 - 0.13 12.2 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term Ge1_WD40 PF16529.5 NODE_75196_length_210_cov_1.057143_g67255_i0reverse_frame_3 - 0.058 12.3 0.3 0.059 12.3 0.3 1.1 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Abhydrolase_3 PF07859.13 NODE_75195_length_210_cov_1.057143_g67254_i0reverse_frame_3 - 0.012 15.5 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold COesterase PF00135.28 NODE_75195_length_210_cov_1.057143_g67254_i0reverse_frame_3 - 0.15 10.9 0.0 0.15 10.9 0.0 1.0 1 0 0 1 1 1 0 Carboxylesterase family vWF_A PF12450.8 NODE_75190_length_210_cov_1.085714_g67249_i0forward_frame_3 - 0.033 14.1 0.1 0.041 13.8 0.1 1.1 1 0 0 1 1 1 0 von Willebrand factor Aconitase PF00330.20 NODE_75188_length_210_cov_1.097143_g67247_i0forward_frame_3 - 1.2e-31 110.2 1.4 1.3e-31 110.1 1.4 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) CDO_I PF05995.12 NODE_75181_length_210_cov_1.137143_g67240_i0reverse_frame_3 - 0.26 10.6 2.0 0.26 10.6 1.3 1.4 1 1 0 1 1 1 0 Cysteine dioxygenase type I CAF1 PF04857.20 NODE_75180_length_210_cov_1.137143_g67239_i0forward_frame_2 - 6.4e-12 45.3 0.0 6.7e-12 45.2 0.0 1.0 1 0 0 1 1 1 1 CAF1 family ribonuclease TraL PF07178.11 NODE_75177_length_210_cov_1.142857_g67236_i0reverse_frame_2 - 0.0064 16.9 0.0 0.0074 16.7 0.0 1.1 1 0 0 1 1 1 1 TraL protein Peptidase_C2 PF00648.21 NODE_75175_length_210_cov_1.142857_g67234_i0reverse_frame_3 - 8.9e-15 54.5 0.0 1e-14 54.3 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease ERF PF04404.12 NODE_75175_length_210_cov_1.142857_g67234_i0forward_frame_2 - 0.1 12.5 0.3 0.11 12.4 0.3 1.0 1 0 0 1 1 1 0 ERF superfamily C2 PF00168.30 NODE_75174_length_210_cov_1.142857_g67233_i0reverse_frame_3 - 0.0015 18.8 0.0 0.0017 18.6 0.0 1.1 1 0 0 1 1 1 1 C2 domain Pkinase PF00069.25 NODE_75152_length_210_cov_1.337143_g67211_i0forward_frame_2 - 3.7e-12 46.2 0.0 4.4e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_75152_length_210_cov_1.337143_g67211_i0forward_frame_2 - 0.0012 18.2 0.0 0.0014 18.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1655 PF07868.11 NODE_75149_length_210_cov_1.354286_g67208_i0forward_frame_3 - 0.043 13.9 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1655) Cellulose_synt PF03552.14 NODE_75148_length_210_cov_1.360000_g67207_i0reverse_frame_3 - 0.11 10.9 0.0 0.13 10.8 0.0 1.0 1 0 0 1 1 1 0 Cellulose synthase zf-UBP_var PF17807.1 NODE_75144_length_210_cov_1.365714_g67203_i0forward_frame_2 - 0.0038 16.9 0.1 0.0046 16.7 0.1 1.1 1 0 0 1 1 1 1 Variant UBP zinc finger DUF2401 PF10287.9 NODE_75140_length_210_cov_1.365714_g67199_i0reverse_frame_2 - 0.012 15.2 0.4 0.013 15.2 0.4 1.0 1 0 0 1 1 1 0 Putative TOS1-like glycosyl hydrolase (DUF2401) PsbI PF02532.14 NODE_75137_length_210_cov_1.371429_g67196_i0reverse_frame_2 - 0.17 11.9 0.9 0.17 11.9 0.9 2.4 3 0 0 3 3 3 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) Caskin-Pro-rich PF16907.5 NODE_75133_length_210_cov_1.371429_g67192_i0reverse_frame_2 - 0.077 13.5 2.7 0.09 13.3 2.7 1.1 1 0 0 1 1 1 0 Proline rich region of Caskin proteins SAMP PF05924.11 NODE_75131_length_210_cov_1.371429_g67190_i0forward_frame_2 - 0.024 13.9 0.2 0.036 13.3 0.2 1.3 1 0 0 1 1 1 0 SAMP Motif Tim17 PF02466.19 NODE_75128_length_210_cov_1.371429_g67187_i0reverse_frame_3 - 0.075 13.4 2.3 0.26 11.7 2.3 1.8 1 1 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family Yae1_N PF09811.9 NODE_75128_length_210_cov_1.371429_g67187_i0reverse_frame_3 - 1 9.1 7.8 5.9 6.7 3.2 2.8 2 1 0 2 2 2 0 Essential protein Yae1, N terminal DUF883 PF05957.13 NODE_75128_length_210_cov_1.371429_g67187_i0reverse_frame_3 - 5.2 7.7 5.7 12 6.5 0.9 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) PilP PF04351.13 NODE_75128_length_210_cov_1.371429_g67187_i0forward_frame_3 - 7.1 6.6 7.3 8 6.4 7.3 1.1 1 0 0 1 1 1 0 Pilus assembly protein, PilP HCBP_related PF06594.11 NODE_75124_length_210_cov_1.382857_g67183_i0reverse_frame_2 - 0.08 12.9 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Haemolysin-type calcium binding protein related domain Ribonuc_2-5A PF06479.12 NODE_75124_length_210_cov_1.382857_g67183_i0forward_frame_2 - 0.1 12.8 0.2 0.12 12.6 0.2 1.0 1 0 0 1 1 1 0 Ribonuclease 2-5A Edc3_linker PF16598.5 NODE_75115_length_210_cov_1.445714_g67174_i0forward_frame_3 - 0.009 16.7 0.0 0.0096 16.6 0.0 1.0 1 0 0 1 1 1 1 Linker region of enhancer of mRNA-decapping protein 3 JmjN PF02375.17 NODE_75113_length_210_cov_1.451429_g67172_i0forward_frame_2 - 0.14 12.1 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 jmjN domain FdhE PF04216.12 NODE_75111_length_210_cov_1.457143_g67170_i0reverse_frame_3 - 0.0028 17.6 3.0 0.003 17.5 3.0 1.0 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation CheR_N PF03705.15 NODE_75101_length_210_cov_1.525714_g67160_i0reverse_frame_3 - 0.018 14.7 0.1 0.031 14.0 0.1 1.4 1 0 0 1 1 1 0 CheR methyltransferase, all-alpha domain Thionin PF00321.17 NODE_75099_length_210_cov_1.537143_g67158_i0forward_frame_2 - 0.067 13.7 2.4 0.09 13.3 2.4 1.2 1 0 0 1 1 1 0 Plant thionin POTRA_TamA_1 PF17243.2 NODE_75098_length_210_cov_1.548571_g67157_i0forward_frame_3 - 0.11 12.6 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 POTRA domain TamA domain 1 F-box-like PF12937.7 NODE_75097_length_210_cov_1.554286_g67156_i0forward_frame_3 - 0.00066 19.5 0.0 0.00094 19.0 0.0 1.3 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 NODE_75097_length_210_cov_1.554286_g67156_i0forward_frame_3 - 0.013 15.4 0.1 0.024 14.5 0.0 1.5 2 0 0 2 2 2 0 F-box domain Chlam_OMP3 PF03503.13 NODE_75094_length_210_cov_1.571429_g67153_i0reverse_frame_3 - 0.015 15.6 0.2 0.015 15.6 0.2 1.5 2 0 0 2 2 2 0 Chlamydia cysteine-rich outer membrane protein 3 Lamprin PF06403.11 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_3 - 0.01 15.8 3.4 0.01 15.8 3.4 2.0 1 1 1 2 2 2 0 Lamprin Chorion_1 PF01723.16 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_3 - 1.6 8.6 5.6 5.8 6.8 5.6 1.8 1 1 0 1 1 1 0 Chorion protein Lamprin PF06403.11 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_2 - 1.4 8.8 7.2 1.3 9.0 2.1 2.0 1 1 1 2 2 2 0 Lamprin DUF2788 PF10981.8 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_2 - 9.5 6.3 17.3 6.2 6.9 2.9 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF2788) Metaviral_G PF09595.10 NODE_75089_length_210_cov_1.600000_g67148_i0forward_frame_2 - 0.051 13.7 1.9 0.055 13.6 1.9 1.0 1 0 0 1 1 1 0 Metaviral_G glycoprotein Pkinase PF00069.25 NODE_75078_length_210_cov_1.651429_g67137_i0reverse_frame_3 - 3.8e-12 46.1 0.1 4.6e-12 45.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_75078_length_210_cov_1.651429_g67137_i0reverse_frame_3 - 1.4e-07 31.1 0.0 1.7e-07 30.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Axin_b-cat_bind PF08833.10 NODE_75074_length_210_cov_1.702857_g67133_i0reverse_frame_3 - 0.41 10.8 3.2 1.3 9.1 0.2 2.2 1 1 1 2 2 2 0 Axin beta-catenin binding domain DUF1732 PF08340.11 NODE_75068_length_210_cov_1.771429_g67127_i0forward_frame_3 - 0.13 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1732) Ribosomal_S17 PF00366.20 NODE_75066_length_210_cov_1.777143_g67125_i0reverse_frame_2 - 0.13 12.4 0.1 0.68 10.1 0.1 1.9 1 1 0 1 1 1 0 Ribosomal protein S17 HECT PF00632.25 NODE_75065_length_210_cov_1.777143_g67124_i0reverse_frame_2 - 6.8e-13 48.8 0.1 7.1e-13 48.7 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) zf-CCCH_4 PF18044.1 NODE_75062_length_210_cov_1.794286_g67121_i0forward_frame_3 - 0.31 10.9 0.4 0.31 10.9 0.4 1.7 2 0 0 2 2 2 0 CCCH-type zinc finger Levi_coat PF01819.17 NODE_75061_length_210_cov_1.800000_g67120_i0reverse_frame_3 - 0.16 12.0 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Levivirus coat protein Pox_J1 PF03338.15 NODE_75057_length_210_cov_1.811429_g67116_i0reverse_frame_3 - 0.037 13.9 0.1 0.045 13.6 0.1 1.1 1 0 0 1 1 1 0 Poxvirus J1 protein Med17 PF10156.9 NODE_75057_length_210_cov_1.811429_g67116_i0forward_frame_3 - 0.014 14.2 0.0 0.014 14.2 0.0 1.0 1 0 0 1 1 1 0 Subunit 17 of Mediator complex TRP PF06011.12 NODE_75056_length_210_cov_1.811429_g67115_i0reverse_frame_3 - 0.012 14.4 1.4 0.014 14.1 1.4 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Rnf-Nqr PF02508.14 NODE_75050_length_210_cov_1.828571_g67109_i0forward_frame_2 - 0.0086 16.1 0.1 0.0087 16.1 0.1 1.1 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein PrkA PF06798.12 NODE_75049_length_210_cov_1.834286_g67108_i0reverse_frame_2 - 0.035 13.7 2.3 0.036 13.7 2.3 1.0 1 0 0 1 1 1 0 PrkA serine protein kinase C-terminal domain IlvN PF07991.12 NODE_75047_length_210_cov_1.857143_g67106_i0reverse_frame_3 - 0.23 11.0 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain XS PF03468.14 NODE_75046_length_210_cov_1.862857_g67105_i0reverse_frame_3 - 0.13 12.5 0.2 0.16 12.3 0.2 1.1 1 0 0 1 1 1 0 XS domain RST PF12174.8 NODE_75044_length_210_cov_1.891429_g67103_i0reverse_frame_3 - 0.12 12.4 0.3 0.21 11.5 0.2 1.5 1 1 1 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain Molydop_binding PF01568.21 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_3 - 0.082 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain DUF1497 PF07384.11 NODE_75039_length_210_cov_1.942857_g67098_i0reverse_frame_3 - 0.022 15.1 0.2 0.033 14.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1497) DUF4378 PF14309.6 NODE_75037_length_210_cov_1.960000_g67096_i0reverse_frame_3 - 0.15 12.4 0.0 0.16 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4378) G6PD_N PF00479.22 NODE_75037_length_210_cov_1.960000_g67096_i0forward_frame_2 - 1.2e-15 58.6 0.0 1.4e-15 58.4 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain G6PD_C PF02781.16 NODE_75037_length_210_cov_1.960000_g67096_i0forward_frame_2 - 8.6e-05 21.9 0.2 0.00012 21.4 0.2 1.2 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain LPD14 PF18827.1 NODE_75037_length_210_cov_1.960000_g67096_i0forward_frame_2 - 0.11 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 14 Spc24 PF08286.11 NODE_75035_length_210_cov_1.971429_g67094_i0forward_frame_2 - 0.037 14.3 0.1 0.044 14.0 0.1 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Lzipper-MIP1 PF14389.6 NODE_75034_length_210_cov_1.977143_g67093_i0reverse_frame_3 - 0.11 12.8 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 SHE3 PF17078.5 NODE_75029_length_210_cov_2.045714_g67088_i0reverse_frame_3 - 0.0094 15.7 2.2 0.0096 15.7 2.2 1.1 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Tic22 PF04278.12 NODE_75029_length_210_cov_2.045714_g67088_i0reverse_frame_3 - 0.023 14.1 0.3 0.024 14.0 0.3 1.1 1 0 0 1 1 1 0 Tic22-like family DUF1717 PF05414.11 NODE_75029_length_210_cov_2.045714_g67088_i0reverse_frame_3 - 0.084 13.3 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Viral domain of unknown function (DUF1717) Attachment_P66 PF11263.8 NODE_75028_length_210_cov_2.051429_g67087_i0forward_frame_2 - 0.024 13.9 0.0 0.027 13.7 0.0 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi attachment protein P66 LPD16 PF18830.1 NODE_75021_length_210_cov_2.154286_g67080_i0reverse_frame_3 - 0.013 15.5 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 16 SieB PF14163.6 NODE_75020_length_210_cov_2.154286_g67079_i0reverse_frame_3 - 0.0057 16.2 2.0 0.0068 15.9 2.0 1.1 1 0 0 1 1 1 1 Super-infection exclusion protein B Jak1_Phl PF17887.1 NODE_75020_length_210_cov_2.154286_g67079_i0reverse_frame_2 - 0.037 14.0 1.0 0.04 13.9 1.0 1.0 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain TcpE PF12648.7 NODE_75020_length_210_cov_2.154286_g67079_i0forward_frame_3 - 0.062 13.9 6.7 0.07 13.7 6.7 1.1 1 0 0 1 1 1 0 TcpE family DUF3791 PF12668.7 NODE_75019_length_210_cov_2.165714_g67078_i0forward_frame_2 - 0.08 13.0 0.4 0.1 12.7 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3791) Usher PF00577.20 NODE_75016_length_210_cov_2.177143_g67075_i0reverse_frame_2 - 6.3e-14 51.7 1.2 6.3e-14 51.7 1.2 1.0 1 0 0 1 1 1 1 Outer membrane usher protein zf-CCCH PF00642.24 NODE_75015_length_210_cov_2.182857_g67074_i0reverse_frame_2 - 0.00051 19.9 13.2 0.0015 18.4 6.9 2.2 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_75015_length_210_cov_2.182857_g67074_i0reverse_frame_2 - 0.45 10.7 14.5 0.65 10.1 5.3 3.0 2 1 1 3 3 3 0 Zinc finger domain Torus PF16131.5 NODE_75015_length_210_cov_2.182857_g67074_i0reverse_frame_2 - 1 10.1 6.5 0.18 12.5 2.4 1.7 1 1 1 2 2 2 0 Torus domain CytB6-F_Fe-S PF08802.10 NODE_75015_length_210_cov_2.182857_g67074_i0forward_frame_3 - 0.07 13.2 0.5 0.12 12.4 0.5 1.3 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit CAP59_mtransfer PF11735.8 NODE_75015_length_210_cov_2.182857_g67074_i0forward_frame_2 - 0.11 12.1 1.1 0.12 12.1 1.1 1.2 1 0 0 1 1 1 0 Cryptococcal mannosyltransferase 1 DUF3339 PF11820.8 NODE_75013_length_210_cov_2.222857_g67072_i0reverse_frame_3 - 0.034 14.3 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3339) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks358.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks358.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks358.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks358.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- mRNA_decap_C PF16741.5 NODE_75012_length_210_cov_2.222857_g67071_i0reverse_frame_3 - 0.027 13.8 0.3 0.038 13.3 0.0 1.5 2 0 0 2 2 2 0 mRNA-decapping enzyme C-terminus DIL PF01843.19 NODE_75008_length_210_cov_2.280000_g67067_i0forward_frame_2 - 0.12 12.7 0.1 0.13 12.6 0.1 1.2 1 0 0 1 1 1 0 DIL domain LexA_DNA_bind PF01726.16 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_2 - 0.025 14.3 0.0 0.041 13.7 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain DLEU7 PF15760.5 NODE_75003_length_210_cov_2.325714_g67062_i0forward_frame_3 - 0.51 9.8 3.1 0.53 9.7 3.1 1.0 1 0 0 1 1 1 0 Leukemia-associated protein 7 zf-CCHC PF00098.23 NODE_75001_length_210_cov_2.342857_g67060_i0forward_frame_3 - 0.0019 18.2 1.5 0.0026 17.7 1.5 1.2 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_75001_length_210_cov_2.342857_g67060_i0forward_frame_3 - 0.051 13.4 1.8 0.073 12.9 1.8 1.3 1 0 0 1 1 1 0 Zinc knuckle Axin_b-cat_bind PF08833.10 NODE_75001_length_210_cov_2.342857_g67060_i0forward_frame_3 - 0.086 13.0 0.5 0.12 12.5 0.5 1.3 1 0 0 1 1 1 0 Axin beta-catenin binding domain DUF423 PF04241.15 NODE_74992_length_210_cov_2.497143_g67051_i0reverse_frame_2 - 0.061 13.5 0.8 0.086 13.1 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF423) DUF3519 PF12033.8 NODE_74989_length_210_cov_2.571429_g67048_i0reverse_frame_3 - 0.02 15.3 0.2 0.02 15.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3519) MASE4 PF17158.4 NODE_74988_length_210_cov_2.628571_g67047_i0reverse_frame_3 - 0.0018 17.6 4.2 0.002 17.4 4.2 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain AP-5_subunit_s1 PF15001.6 NODE_74985_length_210_cov_2.685714_g67044_i0forward_frame_2 - 0.031 14.3 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 Resolvase PF00239.21 NODE_74984_length_210_cov_2.725714_g67043_i0forward_frame_2 - 4.6e-09 36.5 0.5 5.5e-09 36.3 0.5 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain IgG_binding_B PF01378.17 NODE_74984_length_210_cov_2.725714_g67043_i0forward_frame_2 - 0.061 13.4 0.6 0.096 12.8 0.4 1.4 1 1 0 1 1 1 0 B domain F-box-like PF12937.7 NODE_74981_length_210_cov_2.805714_g67040_i0forward_frame_2 - 0.051 13.5 0.3 0.086 12.8 0.2 1.6 1 1 0 1 1 1 0 F-box-like ATPase-cat_bd PF12156.8 NODE_74977_length_210_cov_3.462857_g67036_i0reverse_frame_2 - 0.0022 18.7 4.3 0.0026 18.4 4.3 1.1 1 0 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase Pkinase PF00069.25 NODE_74971_length_210_cov_3.845714_g67030_i0reverse_frame_3 - 5.3e-14 52.2 0.0 5.4e-14 52.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_74971_length_210_cov_3.845714_g67030_i0reverse_frame_3 - 7.6e-05 22.1 0.0 7.8e-05 22.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase MORN PF02493.20 NODE_74970_length_210_cov_4.348571_g67029_i0forward_frame_3 - 2.1e-16 58.7 17.7 2.2e-06 27.2 0.7 3.1 3 0 0 3 3 3 3 MORN repeat SWIB PF02201.18 NODE_74969_length_210_cov_7.485714_g67028_i0forward_frame_2 - 0.022 14.6 0.5 0.03 14.2 0.5 1.3 1 1 0 1 1 1 0 SWIB/MDM2 domain IncD PF17628.2 NODE_74968_length_210_cov_15.068571_g67027_i0reverse_frame_3 - 1.9 8.3 6.1 2.3 8.0 6.1 1.1 1 0 0 1 1 1 0 Inclusion membrane protein D Lipin_N PF04571.14 NODE_74966_length_210_cov_16.725714_g67025_i0reverse_frame_3 - 0.039 13.9 0.0 0.05 13.6 0.0 1.3 1 1 0 1 1 1 0 lipin, N-terminal conserved region DUF3796 PF12676.7 NODE_74965_length_210_cov_16.845714_g67024_i0reverse_frame_2 - 0.023 15.1 10.4 0.025 15.0 10.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) DUF4736 PF15883.5 NODE_74965_length_210_cov_16.845714_g67024_i0reverse_frame_2 - 0.12 12.1 0.1 0.12 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) HATPase_c_5 PF14501.6 NODE_74961_length_210_cov_24.360000_g67020_i0reverse_frame_2 - 0.034 14.1 0.6 0.046 13.6 0.6 1.2 1 0 0 1 1 1 0 GHKL domain CTP_transf_like PF01467.26 NODE_74956_length_210_cov_31.680000_g67015_i0reverse_frame_2 - 0.14 12.4 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase-like DUF2157 PF09925.9 NODE_74955_length_210_cov_32.268571_g67014_i0forward_frame_3 - 0.011 15.5 0.1 0.013 15.3 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) bZIP_1 PF00170.21 NODE_74954_length_210_cov_34.565714_g67013_i0reverse_frame_2 - 0.0067 16.5 2.5 0.0067 16.5 2.5 1.6 2 0 0 2 2 2 1 bZIP transcription factor DUF2774 PF11242.8 NODE_74954_length_210_cov_34.565714_g67013_i0reverse_frame_2 - 0.021 15.0 0.2 0.03 14.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) DUF1465 PF07323.12 NODE_74954_length_210_cov_34.565714_g67013_i0reverse_frame_2 - 0.076 12.9 0.0 0.084 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) TMEM234 PF10639.9 NODE_74954_length_210_cov_34.565714_g67013_i0forward_frame_3 - 0.032 14.3 2.0 0.031 14.3 2.0 1.1 1 0 0 1 1 1 0 Putative transmembrane family 234 DUF1325 PF07039.11 NODE_74953_length_210_cov_36.337143_g67012_i0forward_frame_2 - 0.15 12.1 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 SGF29 tudor-like domain BH4 PF02180.17 NODE_74950_length_210_cov_40.251429_g67009_i0reverse_frame_3 - 0.17 11.7 0.4 11 5.9 0.0 2.4 3 0 0 3 3 3 0 Bcl-2 homology region 4 DrsE_2 PF13686.6 NODE_74948_length_210_cov_42.942857_g67007_i0forward_frame_2 - 0.16 11.8 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 DsrE/DsrF/DrsH-like family zf-XS PF03470.14 NODE_74945_length_210_cov_44.554286_g67004_i0forward_frame_3 - 0.037 14.3 0.0 0.051 13.8 0.0 1.2 1 0 0 1 1 1 0 XS zinc finger domain Arabinose_Iso_C PF11762.8 NODE_74944_length_210_cov_44.662857_g67003_i0reverse_frame_2 - 0.086 12.7 0.0 0.089 12.6 0.0 1.1 1 0 0 1 1 1 0 L-arabinose isomerase C-terminal domain Crust_neuro_H PF03858.13 NODE_74939_length_210_cov_51.045714_g66998_i0reverse_frame_3 - 0.067 14.0 0.0 0.12 13.2 0.0 1.6 1 1 0 1 1 1 0 Crustacean neurohormone H F-box-like PF12937.7 NODE_74937_length_210_cov_54.034286_g66996_i0forward_frame_2 - 0.016 15.0 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 F-box-like DUF726 PF05277.12 NODE_74936_length_210_cov_54.411429_g66995_i0forward_frame_3 - 0.00023 20.2 0.1 0.00024 20.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF726) Haemocyan_bet_s PF14830.6 NODE_74936_length_210_cov_54.411429_g66995_i0forward_frame_3 - 0.13 12.3 0.3 0.32 11.0 0.3 1.6 1 1 0 1 1 1 0 Haemocyanin beta-sandwich BCD PF15461.6 NODE_74935_length_210_cov_54.674286_g66994_i0forward_frame_3 - 0.043 13.3 0.2 0.043 13.3 0.2 1.1 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase DWNN PF08783.11 NODE_74929_length_210_cov_61.080000_g66988_i0reverse_frame_3 - 0.044 14.1 0.3 0.044 14.1 0.3 1.7 2 0 0 2 2 2 0 DWNN domain DMA PF03474.14 NODE_74928_length_210_cov_61.388571_g66987_i0reverse_frame_3 - 0.083 12.5 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 DMRTA motif T2SSI PF02501.17 NODE_74928_length_210_cov_61.388571_g66987_i0reverse_frame_3 - 0.13 12.5 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein I PEGSRP PF07623.11 NODE_74928_length_210_cov_61.388571_g66987_i0forward_frame_3 - 0.19 11.5 0.2 0.19 11.5 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) SEP PF08059.13 NODE_74926_length_210_cov_68.520000_g66985_i0forward_frame_2 - 0.21 12.2 0.0 0.27 11.9 0.0 1.1 1 0 0 1 1 1 0 SEP domain Anti-TRAP PF15777.5 NODE_74925_length_210_cov_68.874286_g66984_i0forward_frame_3 - 2.4 8.2 9.0 8.4 6.4 9.0 1.8 1 1 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF1924 PF09086.11 NODE_74925_length_210_cov_68.874286_g66984_i0forward_frame_3 - 9.4 6.7 8.6 1.5 9.2 0.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF1924) HILPDA PF15220.6 NODE_74923_length_210_cov_70.782857_g66982_i0forward_frame_2 - 0.23 11.6 1.1 7.2 6.8 0.2 2.1 1 1 1 2 2 2 0 Hypoxia-inducible lipid droplet-associated AWS PF17907.1 NODE_74921_length_210_cov_77.062857_g66980_i0reverse_frame_2 - 7.8e-05 22.6 3.6 7.8e-05 22.6 3.6 1.4 2 0 0 2 2 2 1 AWS domain DUF4787 PF16029.5 NODE_74921_length_210_cov_77.062857_g66980_i0reverse_frame_2 - 0.39 10.8 6.2 0.59 10.3 6.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4787) DUF3692 PF12469.8 NODE_74920_length_210_cov_78.777143_g66979_i0forward_frame_3 - 0.21 11.8 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein zf-RING_10 PF16685.5 NODE_74919_length_210_cov_79.297143_g66978_i0forward_frame_3 - 0.12 12.5 1.4 1.9 8.7 0.5 1.9 1 1 1 2 2 2 0 zinc RING finger of MSL2 DUF4132 PF13569.6 NODE_74919_length_210_cov_79.297143_g66978_i0forward_frame_2 - 0.033 14.0 0.1 0.045 13.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4132) Pox_RNA_Pol_19 PF05320.12 NODE_74913_length_210_cov_94.154286_g66972_i0reverse_frame_3 - 2.3 8.2 10.3 2.5 8.0 10.3 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit DUF390 PF04094.14 NODE_74910_length_210_cov_98.600000_g66969_i0forward_frame_3 - 0.0057 15.0 0.1 0.0065 14.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF390) ArenaCapSnatch PF17296.2 NODE_74910_length_210_cov_98.600000_g66969_i0forward_frame_3 - 0.02 14.3 0.0 0.022 14.2 0.0 1.0 1 0 0 1 1 1 0 Arenavirus cap snatching domain DUF3341 PF11821.8 NODE_74908_length_210_cov_100.474286_g66967_i0forward_frame_3 - 0.083 12.5 0.6 0.09 12.4 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) DUF971 PF06155.12 NODE_74907_length_210_cov_103.148571_g66966_i0forward_frame_3 - 0.026 15.2 1.4 0.027 15.1 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF971) FTH PF01827.27 NODE_74906_length_210_cov_104.588571_g66965_i0forward_frame_3 - 0.024 14.4 0.1 0.031 14.1 0.1 1.1 1 0 0 1 1 1 0 FTH domain Mito_fiss_reg PF05308.11 NODE_74899_length_210_cov_123.931429_g66958_i0forward_frame_3 - 4.7 7.2 8.0 4.4 7.3 8.0 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator Tcp10_C PF07202.13 NODE_74894_length_210_cov_268.725714_g66953_i0reverse_frame_2 - 0.0011 19.0 0.1 0.0014 18.6 0.1 1.4 1 1 0 1 1 1 1 T-complex protein 10 C-terminus BssC_TutF PF08201.11 NODE_74893_length_210_cov_296.925714_g66952_i0forward_frame_3 - 0.049 13.6 0.0 0.058 13.4 0.0 1.2 1 0 0 1 1 1 0 BssC/TutF protein DUF4529 PF15032.6 NODE_74891_length_210_cov_493.125714_g66950_i0reverse_frame_2 - 0.00013 21.2 0.0 0.00013 21.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4529) G-patch_2 PF12656.7 NODE_74890_length_210_cov_1114.005714_g66949_i0reverse_frame_2 - 0.078 13.1 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 G-patch domain DUF3012 PF11216.8 NODE_74889_length_210_cov_9183.040000_g66948_i0reverse_frame_2 - 0.057 13.5 0.1 0.08 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3012) ubiquitin PF00240.23 NODE_74888_length_210_cov_49590.788571_g66947_i0reverse_frame_2 - 2.7e-16 59.1 0.6 3.6e-16 58.7 0.6 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_74888_length_210_cov_49590.788571_g66947_i0reverse_frame_2 - 1.9e-06 27.6 0.2 2.3e-06 27.3 0.2 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_74888_length_210_cov_49590.788571_g66947_i0reverse_frame_2 - 0.0013 19.1 0.2 0.0015 19.0 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin-like domain Pelovaterin PF17859.1 ORF99330 - 0.023 15.0 0.3 0.032 14.5 0.3 1.2 1 0 0 1 1 1 0 Pelovaterin Calponin PF00402.18 ORF98862 - 0.62 9.8 4.5 1.6 8.5 0.1 2.6 2 1 0 2 2 2 0 Calponin family repeat DUF5063 PF16702.5 ORF98486 - 0.0004 20.8 0.1 0.0004 20.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5063) Rab5ip PF07019.12 ORF9843 - 5.5e-07 30.1 4.5 6.4e-07 29.9 4.5 1.1 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) MatE PF01554.18 ORF98304 - 0.0019 17.9 0.5 0.0021 17.8 0.5 1.0 1 0 0 1 1 1 1 MatE Synaptobrevin PF00957.21 ORF97834 - 0.0064 16.3 0.1 0.0089 15.8 0.1 1.2 1 0 0 1 1 1 1 Synaptobrevin KH_1 PF00013.29 ORF97433 - 6.9e-07 29.0 0.3 8.2e-07 28.8 0.3 1.1 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF97433 - 0.0012 18.6 0.5 0.0013 18.5 0.5 1.1 1 0 0 1 1 1 1 KH domain SLIDE PF09111.10 ORF96654 - 0.028 14.4 0.1 0.032 14.3 0.1 1.1 1 0 0 1 1 1 0 SLIDE DUF3029 PF11230.8 ORF96476 - 1.5e-19 69.7 0.1 1.7e-19 69.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3029) Tugs PF17840.1 ORF96335 - 0.6 10.3 4.9 0.48 10.7 2.7 1.9 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain Spem1 PF15670.5 ORF96279 - 7.7 6.0 12.7 8 6.0 12.7 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 zf-rbx1 PF12678.7 ORF95513 - 5.2e-06 26.7 3.0 5.2e-06 26.7 3.0 1.6 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF95513 - 4.6e-05 23.7 2.5 4.6e-05 23.7 2.5 1.8 2 1 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF95513 - 0.00021 21.0 1.6 0.00045 20.0 1.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF95513 - 0.014 15.3 1.7 0.014 15.3 1.7 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF95513 - 0.014 15.4 0.7 0.028 14.4 0.5 1.6 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_Tnp_IS1595 PF12760.7 ORF95513 - 0.027 14.4 1.0 0.036 14.0 1.0 1.4 1 1 0 1 1 1 0 Transposase zinc-ribbon domain RINGv PF12906.7 ORF95513 - 0.12 12.5 1.7 0.12 12.5 1.7 1.6 2 0 0 2 2 2 0 RING-variant domain DUF4738 PF15889.5 ORF9514 - 0.037 13.9 0.2 0.054 13.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4738) PBP1_TM PF14812.6 ORF95028 - 3.8 8.0 9.8 4.4 7.7 9.8 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal FAM176 PF14851.6 ORF95028 - 3.8 7.2 8.7 4 7.1 8.7 1.1 1 0 0 1 1 1 0 FAM176 family IQCJ-SCHIP1 PF15157.6 ORF94921 - 2.4 8.0 5.3 0.33 10.8 0.8 1.7 1 1 1 2 2 2 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif Ureide_permease PF07168.11 ORF948 - 6.8e-09 34.9 1.6 7e-09 34.9 1.6 1.0 1 0 0 1 1 1 1 Ureide permease Succ_DH_flav_C PF02910.20 ORF94354 - 1.9e-16 60.2 0.1 2.1e-16 60.1 0.1 1.0 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term DUF4131 PF13567.6 ORF94147 - 1.9 8.1 5.7 2.2 7.9 5.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2269 PF10027.9 ORF94147 - 6.6 6.8 9.3 9.5 6.3 0.3 2.1 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2269) HEAT_PBS PF03130.16 ORF93820 - 0.012 16.2 0.0 0.028 15.1 0.0 1.6 2 0 0 2 2 2 0 PBS lyase HEAT-like repeat Glyco_hydro_108 PF05838.12 ORF93432 - 0.039 14.4 0.2 0.041 14.4 0.2 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase 108 FixQ PF05545.11 ORF93311 - 0.021 14.8 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF2157 PF09925.9 ORF93311 - 0.027 14.3 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Herpes_capsid PF06112.11 ORF93097 - 4.2 7.4 9.0 4.5 7.3 9.0 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein CLAG PF03805.13 ORF92879 - 0.019 12.6 0.2 0.023 12.3 0.2 1.0 1 0 0 1 1 1 0 Cytoadherence-linked asexual protein Leuk-A4-hydro_C PF09127.11 ORF92879 - 0.077 13.1 0.0 0.093 12.8 0.0 1.2 1 0 0 1 1 1 0 Leukotriene A4 hydrolase, C-terminal NOC3p PF07540.11 ORF92587 - 0.11 13.0 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Nucleolar complex-associated protein Myb_DNA-bind_6 PF13921.6 ORF92580 - 0.0088 16.3 0.0 0.013 15.7 0.0 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 ORF92580 - 0.03 14.5 0.1 0.041 14.1 0.1 1.2 1 0 0 1 1 1 0 Myb-like DNA-binding domain zf-RING_2 PF13639.6 ORF9237 - 2.5e-09 37.3 2.5 3e-09 37.1 2.5 1.1 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF9237 - 3.5e-08 33.6 4.2 4.6e-08 33.2 4.2 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF9237 - 2.7e-06 27.1 2.2 3.7e-06 26.7 2.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF9237 - 1.7e-05 24.4 1.0 2.6e-05 23.9 1.0 1.3 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF9237 - 0.00031 20.5 1.5 0.0004 20.2 1.5 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF9237 - 0.00066 19.7 0.7 0.00087 19.3 0.7 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF9237 - 0.0011 18.9 1.0 0.0014 18.5 1.0 1.1 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF9237 - 0.002 18.1 2.8 0.0027 17.7 2.8 1.2 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF9237 - 0.0045 16.8 0.9 0.0059 16.4 0.9 1.1 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF9237 - 0.015 14.9 2.8 0.022 14.3 2.8 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zinc_ribbon_16 PF17034.5 ORF9237 - 0.092 13.0 1.2 0.13 12.5 1.2 1.1 1 0 0 1 1 1 0 Zinc-ribbon like family SHIPPO-rpt PF07004.12 ORF92127 - 0.066 14.1 0.6 0.12 13.3 0.6 1.5 1 0 0 1 1 1 0 Sperm-tail PG-rich repeat RTP801_C PF07809.11 ORF91753 - 0.099 12.6 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 RTP801 C-terminal region Fcf1 PF04900.12 ORF91626 - 0.024 15.0 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Fcf1 Stevor PF17410.2 ORF91190 - 0.0049 16.5 0.2 0.0049 16.5 0.2 1.0 1 0 0 1 1 1 1 Subtelomeric Variable Open Reading frame Pertus-S5-tox PF09276.10 ORF91090 - 0.13 12.3 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Pertussis toxin S5 subunit Ldr_toxin PF13940.6 ORF90022 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system DUF29 PF01724.16 ORF89900 - 0.066 13.5 3.3 0.068 13.4 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF29 FAM199X PF15814.5 ORF89900 - 2.3 7.2 6.0 3 6.8 6.0 1.1 1 0 0 1 1 1 0 Protein family FAM199X HTH_1 PF00126.27 ORF89728 - 0.15 12.1 0.1 0.19 11.7 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Ldr_toxin PF13940.6 ORF89519 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system CBM_10 PF02013.16 ORF89440 - 0.034 14.6 0.1 0.049 14.1 0.1 1.2 1 0 0 1 1 1 0 Cellulose or protein binding domain Ldr_toxin PF13940.6 ORF88595 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system MTHFR_C PF12225.8 ORF88554 - 0.22 11.2 2.7 0.27 10.9 0.3 1.9 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal DUF4701 PF15773.5 ORF88546 - 0.011 14.8 2.0 0.012 14.7 2.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4701) T_cell_tran_alt PF15128.6 ORF88349 - 0.05 13.4 0.1 0.055 13.3 0.1 1.2 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF5090 PF17009.5 ORF88349 - 4.3 7.3 9.1 4.8 7.1 9.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) NDUF_B4 PF07225.12 ORF88201 - 0.1 12.5 0.3 0.11 12.4 0.3 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) RLI PF04068.15 ORF87913 - 0.025 14.4 3.6 0.042 13.7 3.6 1.3 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI T_cell_tran_alt PF15128.6 ORF87582 - 0.05 13.4 0.1 0.055 13.3 0.1 1.2 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF5090 PF17009.5 ORF87582 - 4.3 7.3 9.1 4.8 7.1 9.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) RNA_pol_Rpc4 PF05132.14 ORF87083 - 0.048 14.1 0.7 0.048 14.1 0.7 1.7 1 1 1 2 2 2 0 RNA polymerase III RPC4 Dynein_attach_N PF15867.5 ORF86952 - 4.8e-05 23.2 0.1 0.00028 20.8 0.0 2.2 1 1 2 3 3 3 1 Dynein attachment factor N-terminus Fcf1 PF04900.12 ORF86929 - 0.024 15.0 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Fcf1 Arf PF00025.21 ORF86110 - 9.3e-20 70.8 0.0 1e-19 70.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MeaB PF03308.16 ORF86110 - 0.032 13.2 0.0 0.035 13.1 0.0 1.0 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB COX17 PF05051.13 ORF85631 - 7.3e-16 58.3 8.2 8.9e-16 58.0 8.2 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase copper chaperone (COX17) Gemini_mov PF01708.16 ORF85206 - 0.058 13.2 1.8 0.073 12.8 1.8 1.1 1 0 0 1 1 1 0 Geminivirus putative movement protein zf_UBZ PF18439.1 ORF85184 - 2.7e-05 23.6 6.0 0.0013 18.3 0.9 2.4 2 1 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-DNA_Pol PF08996.10 ORF85184 - 0.0051 16.6 4.2 0.0063 16.3 4.2 1.0 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger DpnII PF04556.12 ORF85184 - 0.0057 16.0 0.5 0.0062 15.9 0.5 1.0 1 0 0 1 1 1 1 DpnII restriction endonuclease Sgf11 PF08209.11 ORF85184 - 0.036 13.6 6.2 0.8 9.3 0.3 2.2 1 1 1 2 2 2 0 Sgf11 (transcriptional regulation protein) XAF1_C PF18608.1 ORF85184 - 0.048 13.2 3.6 0.07 12.7 3.4 1.5 1 1 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain zf-C2H2 PF00096.26 ORF85184 - 0.078 13.5 2.8 4 8.1 0.3 2.8 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF85184 - 0.85 10.6 0.3 0.85 10.6 0.3 2.5 2 1 0 2 2 2 0 C2H2-type zinc finger YyzF PF14116.6 ORF85184 - 3.7 7.7 9.4 1.7 8.7 2.0 2.1 1 1 1 2 2 2 0 YyzF-like protein PGP_phosphatase PF09419.10 ORF85160 - 0.15 11.7 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase PyrI PF01948.18 ORF84843 - 0.029 14.6 2.0 0.035 14.4 2.0 1.3 1 0 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, allosteric domain Baculo_gp64 PF03273.13 ORF84476 - 0.1 11.4 0.5 0.11 11.3 0.5 1.0 1 0 0 1 1 1 0 Baculovirus gp64 envelope glycoprotein family Erg28 PF03694.13 ORF84264 - 0.041 14.3 0.2 0.051 14.0 0.2 1.1 1 0 0 1 1 1 0 Erg28 like protein INTAP PF16617.5 ORF84260 - 0.033 14.6 5.1 0.04 14.3 5.1 1.1 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region DUF746 PF05344.11 ORF84074 - 0.055 13.3 0.4 0.08 12.8 0.4 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) RANK_CRD_2 PF18278.1 ORF84074 - 0.11 12.7 0.8 0.11 12.7 0.8 1.7 1 1 0 1 1 1 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 RadC PF04002.15 ORF83615 - 0.097 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 RadC-like JAB domain SWC7 PF17330.2 ORF83328 - 0.013 15.6 0.1 0.015 15.4 0.1 1.2 1 0 0 1 1 1 0 SWR1 chromatin-remodelling complex, sub-unit Swc7 Pribosyltran PF00156.27 ORF83233 - 2.7e-07 30.2 0.0 2.8e-07 30.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF83233 - 0.00032 20.2 0.0 0.00032 20.2 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 ORF83233 - 0.003 17.1 0.0 0.0031 17.0 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase Reticulon PF02453.17 ORF82927 - 0.16 11.9 0.0 0.19 11.7 0.0 1.0 1 0 0 1 1 1 0 Reticulon Peptidase_S64 PF08192.11 ORF82442 - 0.058 11.9 0.2 0.061 11.8 0.2 1.0 1 0 0 1 1 1 0 Peptidase family S64 Chitin_synth_2 PF03142.15 ORF82298 - 2.2e-06 26.6 0.0 2.4e-06 26.5 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF82298 - 5.2e-05 23.3 0.0 5.6e-05 23.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF82298 - 0.00011 22.2 0.0 0.00012 22.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 QIL1 PF15884.5 ORF82298 - 0.14 12.8 0.0 0.16 12.6 0.0 1.2 1 0 0 1 1 1 0 MICOS complex subunit MIC13, QIL1 NADH_dehy_S2_C PF06444.11 ORF82210 - 0.1 13.2 2.6 0.19 12.2 2.6 1.4 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus DUF832 PF05734.11 ORF8220 - 0.061 12.8 0.0 0.064 12.7 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) Thioredoxin_4 PF13462.6 ORF81973 - 0.0038 17.4 0.0 0.0044 17.2 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF81973 - 0.036 13.8 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Herpes_PAP PF03325.13 ORF81973 - 0.16 11.6 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus polymerase accessory protein V-SNARE_C PF12352.8 ORF81944 - 0.048 14.0 0.8 5.8 7.3 0.1 2.1 2 0 0 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus Pterin_4a PF01329.19 ORF81401 - 2.4e-17 62.9 0.0 2.9e-17 62.6 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase Peptidase_M10 PF00413.24 ORF81168 - 0.079 12.8 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Matrixin DUF2633 PF11119.8 ORF81159 - 0.0054 16.6 0.2 0.0054 16.6 0.2 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2633) 2-Hacid_dh_C PF02826.19 ORF81159 - 0.073 12.4 0.1 0.085 12.2 0.1 1.0 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABC_tran PF00005.27 ORF80148 - 1.8e-10 41.4 0.0 2.2e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SbcCD_C PF13558.6 ORF80148 - 0.00013 22.2 0.4 0.0066 16.7 0.4 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF80148 - 0.015 14.8 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Ribosomal_L18p PF00861.22 ORF79885 - 0.086 13.2 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Copper-fist PF00649.18 ORF79448 - 0.023 14.2 1.4 0.045 13.2 1.4 1.5 1 0 0 1 1 1 0 Copper fist DNA binding domain CSD PF00313.22 ORF79420 - 3e-33 113.5 1.6 3.2e-33 113.4 1.6 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF79420 - 0.0012 18.5 0.4 0.0015 18.1 0.4 1.4 1 1 0 1 1 1 1 Ribonuclease B OB domain GlutR_dimer PF00745.20 ORF78810 - 0.00014 22.2 0.1 0.00016 22.1 0.1 1.1 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain Fib_alpha PF08702.10 ORF78810 - 0.037 14.2 4.4 0.067 13.4 4.4 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family IlvGEDA_leader PF08046.11 ORF78364 - 0.084 12.3 0.1 0.084 12.3 0.1 1.6 2 0 0 2 2 2 0 IlvGEDA operon leader peptide MAGI_u5 PF16666.5 ORF77917 - 1 9.5 8.1 1.1 9.5 8.1 1.0 1 0 0 1 1 1 0 Unstructured region on MAGI Abhydro_lipase PF04083.16 ORF7779 - 4e-19 67.9 0.0 4.5e-19 67.8 0.0 1.1 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region DUF4717 PF15838.5 ORF7779 - 0.2 11.7 0.0 0.23 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4717) Elong_Iki1 PF10483.9 ORF77334 - 0.056 12.9 0.0 0.059 12.9 0.0 1.0 1 0 0 1 1 1 0 Elongator subunit Iki1 Pkinase PF00069.25 ORF76122 - 6.1e-14 52.0 0.7 6.4e-14 51.9 0.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF76122 - 1.6e-09 37.4 0.1 1.6e-09 37.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PMBR PF09373.10 ORF76122 - 0.072 13.3 1.0 0.66 10.2 0.1 2.5 2 1 0 2 2 2 0 Pseudomurein-binding repeat Ribosomal_S13 PF00416.22 ORF76122 - 0.12 12.8 0.1 0.13 12.6 0.1 1.0 1 0 0 1 1 1 0 Ribosomal protein S13/S18 ECSCR PF15820.5 ORF75928 - 0.0061 16.4 2.7 0.0061 16.4 2.7 1.1 1 0 0 1 1 1 1 Endothelial cell-specific chemotaxis regulator SP_C-Propep PF08999.10 ORF75928 - 0.034 13.9 7.9 0.043 13.6 7.9 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide SecY PF00344.20 ORF75928 - 0.034 13.4 1.2 0.031 13.5 1.2 1.0 1 0 0 1 1 1 0 SecY translocase ODV-E18 PF10717.9 ORF75928 - 0.052 13.4 0.5 0.052 13.4 0.5 1.3 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 MTABC_N PF16185.5 ORF75928 - 0.087 12.3 1.1 0.09 12.3 1.1 1.0 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region DUF3357 PF11837.8 ORF75928 - 0.088 13.3 2.0 0.091 13.2 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) Baculo_11_kDa PF06143.11 ORF75928 - 0.14 11.7 5.9 0.18 11.4 5.9 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family NICE-3 PF07406.11 ORF75928 - 0.15 12.1 2.3 0.17 11.9 2.3 1.1 1 0 0 1 1 1 0 NICE-3 protein EphA2_TM PF14575.6 ORF75928 - 0.17 12.8 2.4 0.19 12.6 2.4 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Amnionless PF14828.6 ORF75928 - 0.24 10.2 1.0 0.24 10.2 1.0 1.0 1 0 0 1 1 1 0 Amnionless TMEM156 PF15106.6 ORF75928 - 0.24 10.8 1.2 0.26 10.7 1.2 1.1 1 0 0 1 1 1 0 TMEM156 protein family DUF929 PF06053.11 ORF75928 - 0.28 10.5 2.8 0.28 10.5 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) Shisa PF13908.6 ORF75928 - 0.41 10.9 2.0 0.42 10.8 2.0 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator TMEM154 PF15102.6 ORF75928 - 5.9 6.8 5.1 7 6.6 5.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family LINES_N PF14694.6 ORF75537 - 0.0017 17.9 1.1 0.0017 17.9 1.1 1.0 1 0 0 1 1 1 1 Lines N-terminus DUF5439 PF17507.2 ORF75537 - 0.01 16.0 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5439) TRAM_2 PF18693.1 ORF75369 - 0.013 15.7 0.0 0.018 15.2 0.0 1.2 1 0 0 1 1 1 0 TRAM domain Chitin_synth_2 PF03142.15 ORF75208 - 2.2e-06 26.6 0.0 2.4e-06 26.5 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF75208 - 5.2e-05 23.3 0.0 5.6e-05 23.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF75208 - 0.00011 22.2 0.0 0.00012 22.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 QIL1 PF15884.5 ORF75208 - 0.14 12.8 0.0 0.16 12.6 0.0 1.2 1 0 0 1 1 1 0 MICOS complex subunit MIC13, QIL1 EF-hand_1 PF00036.32 ORF75093 - 4.2e-17 60.3 0.7 1.4e-07 30.6 0.1 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF75093 - 1.4e-16 60.7 0.1 1.5e-16 60.6 0.1 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF75093 - 7.9e-14 50.3 0.1 1.3e-06 27.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF75093 - 3.7e-13 49.1 1.1 2.4e-06 27.3 0.3 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF75093 - 4.2e-13 48.1 0.8 1.1e-05 24.7 0.1 2.3 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF75093 - 0.00018 21.8 0.1 0.00021 21.6 0.1 1.0 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF75093 - 0.0003 21.0 0.0 0.00037 20.8 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF75093 - 0.0029 17.5 0.1 0.0031 17.4 0.1 1.1 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Lip_prot_lig_C PF10437.9 ORF75093 - 0.027 14.4 0.3 0.14 12.1 0.2 1.8 1 1 1 2 2 2 0 Bacterial lipoate protein ligase C-terminus PMBR PF09373.10 ORF75093 - 0.065 13.4 0.0 20 5.5 0.0 2.7 3 0 0 3 3 3 0 Pseudomurein-binding repeat Trehalase_Ca-bi PF07492.11 ORF75093 - 0.093 12.5 0.5 0.18 11.5 0.5 1.5 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain UPF0154 PF03672.13 ORF75093 - 0.21 11.6 0.0 0.28 11.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) Vta1 PF04652.16 ORF74636 - 0.023 14.7 0.1 0.023 14.7 0.1 1.0 1 0 0 1 1 1 0 Vta1 like Ank_2 PF12796.7 ORF74473 - 2.4e-05 24.8 0.0 3.2e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF74473 - 0.0024 18.2 0.0 0.014 15.8 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeat Ank_5 PF13857.6 ORF74473 - 0.0028 17.9 0.0 0.0067 16.7 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF74473 - 0.0073 16.7 0.0 0.013 15.9 0.0 1.5 2 0 0 2 2 2 1 Ankyrin repeat TBK1_ULD PF18396.1 ORF74000 - 0.023 14.6 1.3 0.029 14.3 1.3 1.2 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain FERM_M PF00373.18 ORF7399 - 0.045 14.2 0.3 0.047 14.1 0.3 1.2 1 0 0 1 1 1 0 FERM central domain Rota_VP4_MID PF17477.2 ORF73822 - 0.074 12.4 0.0 0.074 12.4 0.0 1.1 1 0 0 1 1 1 0 Rotavirus VP4 membrane interaction domain HxlR PF01638.17 ORF73770 - 0.083 12.8 0.0 0.097 12.5 0.0 1.1 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Fcf1 PF04900.12 ORF73530 - 0.024 15.0 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Fcf1 Hormone_6 PF00236.18 ORF7344 - 0.33 11.0 3.5 0.9 9.6 0.9 2.0 1 1 1 2 2 2 0 Glycoprotein hormone UPAR_LY6 PF00021.21 ORF73075 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF73075 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain Baculo_11_kDa PF06143.11 ORF7296 - 0.0056 16.2 0.1 0.0057 16.2 0.1 1.1 1 0 0 1 1 1 1 Baculovirus 11 kDa family Neurensin PF14927.6 ORF7296 - 0.057 13.1 0.0 0.057 13.1 0.0 1.1 1 0 0 1 1 1 0 Neurensin DUF2873 PF11395.8 ORF7296 - 0.061 13.2 1.9 0.084 12.7 1.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2873) DUF3592 PF12158.8 ORF7296 - 0.15 12.1 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) Stk19 PF10494.9 ORF72458 - 0.061 13.0 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 Calcipressin PF04847.12 ORF72458 - 0.21 11.3 0.0 0.24 11.1 0.0 1.1 1 0 0 1 1 1 0 Calcipressin DUF4832 PF16116.5 ORF72338 - 0.025 14.4 0.1 0.025 14.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4832) MIF4G PF02854.19 ORF72266 - 0.00024 20.8 0.0 0.00027 20.7 0.0 1.0 1 0 0 1 1 1 1 MIF4G domain DUF4711 PF15829.5 ORF71904 - 0.093 12.7 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4711) Cep57_CLD_2 PF14197.6 ORF71365 - 0.051 13.7 1.5 0.18 11.9 0.6 1.9 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 T3SS_needle_E PF08988.10 ORF71365 - 0.062 13.5 0.7 1.1 9.4 0.1 2.1 1 1 0 2 2 2 0 Type III secretion system, cytoplasmic E component of needle DUF1664 PF07889.12 ORF71365 - 0.074 13.1 2.0 0.091 12.8 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4164 PF13747.6 ORF71365 - 0.088 13.1 4.6 0.098 12.9 4.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) FOXP-CC PF16159.5 ORF71365 - 0.13 12.9 1.4 7.3 7.3 0.9 2.0 2 0 0 2 2 2 0 FOXP coiled-coil domain Med21 PF11221.8 ORF71365 - 0.38 11.0 5.9 0.94 9.7 1.7 2.0 1 1 1 2 2 2 0 Subunit 21 of Mediator complex RuvX PF03652.15 ORF71292 - 0.22 11.9 5.6 0.26 11.7 5.6 1.0 1 0 0 1 1 1 0 Holliday junction resolvase ODC_AZ PF02100.17 ORF71067 - 0.077 13.0 0.0 0.084 12.9 0.0 1.0 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme Rod_cone_degen PF15201.6 ORF70172 - 0.078 13.1 0.3 10 6.3 0.1 2.1 2 0 0 2 2 2 0 Progressive rod-cone degeneration PLDc PF00614.22 ORF70164 - 7.3e-07 29.1 0.0 1.9e-06 27.8 0.0 1.7 2 0 0 2 2 2 1 Phospholipase D Active site motif PLDc_2 PF13091.6 ORF70164 - 0.00055 19.8 0.0 0.00063 19.6 0.0 1.1 1 0 0 1 1 1 1 PLD-like domain PLA2_inh PF02988.15 ORF70057 - 0.06 14.0 0.1 0.088 13.5 0.0 1.4 1 1 0 1 1 1 0 Phospholipase A2 inhibitor FWWh PF14922.6 ORF69996 - 0.056 13.4 0.4 0.055 13.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function UPAR_LY6 PF00021.21 ORF69905 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF69905 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain SLIDE PF09111.10 ORF69317 - 0.028 14.4 0.1 0.032 14.3 0.1 1.1 1 0 0 1 1 1 0 SLIDE BrnA_antitoxin PF14384.6 ORF68910 - 0.0066 16.9 0.0 0.0073 16.8 0.0 1.2 1 0 0 1 1 1 1 BrnA antitoxin of type II toxin-antitoxin system Pox_A_type_inc PF04508.12 ORF68910 - 0.45 10.5 3.4 13 5.8 0.0 3.0 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat DUF2544 PF11245.8 ORF68489 - 7.8e-29 100.8 0.2 8.5e-29 100.7 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2544) SAVED PF18145.1 ORF68373 - 0.072 12.9 0.0 0.075 12.8 0.0 1.0 1 0 0 1 1 1 0 SMODS-associated and fused to various effectors sensor domain Cytochrome_CBB3 PF13442.6 ORF67871 - 0.018 15.3 0.0 0.022 15.1 0.0 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III MAR_sialic_bdg PF10564.9 ORF67853 - 0.033 14.2 1.5 0.038 14.0 1.5 1.1 1 0 0 1 1 1 0 Sialic-acid binding micronemal adhesive repeat DNA_pol3_theta PF06440.11 ORF67671 - 0.049 13.3 0.2 0.069 12.8 0.2 1.2 1 0 0 1 1 1 0 DNA polymerase III, theta subunit MBDa PF16564.5 ORF67642 - 0.042 14.0 0.4 0.057 13.6 0.4 1.3 1 0 0 1 1 1 0 p55-binding region of Methyl-CpG-binding domain proteins MBD PY_rept_46 PF09689.10 ORF66433 - 0.051 14.1 5.5 0.074 13.6 5.4 1.4 1 1 0 1 1 1 0 Plasmodium yoelii repeat (PY_rept_46) Response_reg PF00072.24 ORF66059 - 3.9e-12 46.3 0.1 4.2e-12 46.2 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain GntR PF00392.21 ORF65813 - 3.7e-20 71.3 0.1 4.4e-20 71.1 0.1 1.0 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 ORF65813 - 1.2e-06 28.2 0.0 2e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 ORF65813 - 1.2e-06 28.3 0.1 2.6e-06 27.3 0.0 1.5 2 0 0 2 2 2 1 HTH domain MarR_2 PF12802.7 ORF65813 - 0.00068 19.5 0.2 0.00068 19.5 0.2 1.5 2 0 0 2 2 2 1 MarR family HTH_29 PF13551.6 ORF65813 - 0.0052 16.8 0.1 0.0082 16.1 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn helix RP-C PF03428.13 ORF65813 - 0.009 15.7 0.0 0.011 15.4 0.0 1.1 1 0 0 1 1 1 1 Replication protein C N-terminal domain MarR PF01047.22 ORF65813 - 0.0097 15.8 0.1 0.018 14.9 0.0 1.5 2 0 0 2 2 2 1 MarR family HTH_41 PF14502.6 ORF65813 - 0.012 15.3 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.6 ORF65813 - 0.013 15.5 0.0 0.019 14.9 0.0 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain TrmB PF01978.19 ORF65813 - 0.013 15.4 0.1 0.063 13.2 0.0 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 ORF65813 - 0.046 13.8 0.3 7.1 6.8 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 ORF65813 - 0.076 13.2 0.0 1.6 9.0 0.0 2.0 1 1 1 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 ORF65813 - 0.14 12.5 0.0 0.36 11.2 0.0 1.5 1 1 1 2 2 2 0 Transcriptional regulator UPF0223 PF05256.12 ORF65736 - 0.012 15.9 0.9 0.02 15.2 0.9 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0223) Fucose_iso_N1 PF07881.12 ORF6561 - 0.14 12.0 0.1 0.15 11.9 0.1 1.0 1 0 0 1 1 1 0 L-fucose isomerase, first N-terminal domain NIF PF03031.18 ORF65319 - 9.5e-21 74.2 0.1 1e-20 74.1 0.1 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Arg_repressor PF01316.21 ORF6513 - 0.0084 15.8 0.3 0.15 11.8 0.0 2.0 1 1 1 2 2 2 1 Arginine repressor, DNA binding domain P53_C PF11619.8 ORF6513 - 0.15 12.2 0.3 0.2 11.7 0.3 1.2 1 0 0 1 1 1 0 Transcription factor P53 - C terminal domain Na_H_Exchanger PF00999.21 ORF65097 - 0.0021 16.9 1.9 0.0022 16.8 1.9 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Fcf1 PF04900.12 ORF64921 - 0.024 15.0 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Fcf1 DUF2099 PF09872.9 ORF63949 - 0.067 12.4 0.1 0.07 12.3 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2099) Doppel PF11466.8 ORF63780 - 0.26 11.0 0.1 0.26 11.0 0.1 1.8 2 0 0 2 2 2 0 Prion-like protein Doppel Troponin PF00992.20 ORF63389 - 0.00063 20.0 6.0 0.26 11.6 0.2 2.1 1 1 1 2 2 2 2 Troponin Csm1_N PF18504.1 ORF63389 - 0.0019 18.5 9.5 0.041 14.2 4.0 2.1 1 1 1 2 2 2 2 Csm1 N-terminal domain HCMV_UL139 PF12507.8 ORF63389 - 0.0071 16.7 1.5 0.0083 16.5 1.5 1.1 1 0 0 1 1 1 1 Human Cytomegalovirus UL139 protein DUF2680 PF10925.8 ORF63389 - 0.0076 16.2 9.1 0.076 13.0 0.7 2.7 3 0 0 3 3 2 2 Protein of unknown function (DUF2680) IFT57 PF10498.9 ORF63389 - 0.01 14.9 8.8 0.011 14.8 8.8 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 PKcGMP_CC PF16808.5 ORF63389 - 0.011 15.6 9.5 0.43 10.5 2.0 2.8 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase SlyX PF04102.12 ORF63389 - 0.013 16.1 13.1 0.17 12.5 7.6 2.1 1 1 1 2 2 2 0 SlyX HR1 PF02185.16 ORF63389 - 0.02 15.0 3.0 0.02 15.0 3.0 2.2 1 1 1 2 2 2 0 Hr1 repeat FAM76 PF16046.5 ORF63389 - 0.046 13.1 9.6 0.048 13.0 9.6 1.0 1 0 0 1 1 1 0 FAM76 protein Tup_N PF08581.10 ORF63389 - 0.056 13.7 10.2 0.75 10.1 10.0 2.0 1 1 0 1 1 1 0 Tup N-terminal ABC_tran_CTD PF16326.5 ORF63389 - 0.063 13.5 8.9 0.083 13.2 8.9 1.2 1 0 0 1 1 1 0 ABC transporter C-terminal domain DivIC PF04977.15 ORF63389 - 0.079 12.7 14.4 23 4.9 14.4 2.1 1 1 0 1 1 1 0 Septum formation initiator THOC7 PF05615.13 ORF63389 - 0.095 13.0 9.1 0.11 12.8 9.1 1.1 1 0 0 1 1 1 0 Tho complex subunit 7 TSC22 PF01166.18 ORF63389 - 0.098 13.0 1.8 4.8 7.6 0.3 2.5 1 1 1 2 2 2 0 TSC-22/dip/bun family Pox_A_type_inc PF04508.12 ORF63389 - 0.1 12.5 4.8 2.4 8.1 0.3 2.8 2 1 1 3 3 3 0 Viral A-type inclusion protein repeat DUF16 PF01519.16 ORF63389 - 0.14 12.7 9.6 0.24 11.9 9.6 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 GrpE PF01025.19 ORF63389 - 0.15 11.7 7.3 0.2 11.3 7.3 1.3 1 0 0 1 1 1 0 GrpE kleA_kleC PF17383.2 ORF63389 - 0.17 12.3 2.8 0.52 10.7 2.2 1.8 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A DUF919 PF06034.11 ORF63389 - 0.17 11.7 5.6 1 9.2 0.2 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) Med9 PF07544.13 ORF63389 - 0.18 11.9 10.4 1.3 9.1 2.1 2.2 1 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF3450 PF11932.8 ORF63389 - 0.19 11.0 13.3 2.3 7.4 13.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4972 PF16342.5 ORF63389 - 0.21 11.3 3.2 0.23 11.1 3.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) CENP-K PF11802.8 ORF63389 - 0.22 11.0 8.8 0.24 10.9 8.8 1.0 1 0 0 1 1 1 0 Centromere-associated protein K ubiquitin PF00240.23 ORF63389 - 0.25 11.1 5.5 0.66 9.8 2.9 2.5 1 1 1 2 2 2 0 Ubiquitin family DUF3160 PF11369.8 ORF63389 - 0.3 9.5 4.5 0.31 9.4 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3160) MPS2 PF17060.5 ORF63389 - 0.33 10.2 6.4 0.73 9.0 2.1 1.8 1 1 1 2 2 2 0 Monopolar spindle protein 2 V_ATPase_I PF01496.19 ORF63389 - 0.35 8.7 4.4 0.38 8.6 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF724 PF05266.14 ORF63389 - 0.39 10.5 6.7 0.44 10.4 6.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF4200 PF13863.6 ORF63389 - 0.52 10.7 12.4 0.48 10.8 6.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) AAA_13 PF13166.6 ORF63389 - 0.55 8.8 6.8 0.5 8.9 6.8 1.0 1 0 0 1 1 1 0 AAA domain DWNN PF08783.11 ORF63389 - 0.58 10.5 3.4 2.8 8.3 3.3 1.9 1 1 0 1 1 1 0 DWNN domain HlyD_2 PF12700.7 ORF63389 - 0.67 8.6 7.1 0.75 8.5 7.1 1.0 1 0 0 1 1 1 0 HlyD family secretion protein FlaC_arch PF05377.11 ORF63389 - 0.97 9.9 4.7 73 3.9 4.7 2.2 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) USP8_interact PF08941.10 ORF63389 - 1.1 9.0 6.4 4.6 7.0 6.4 1.8 1 1 0 1 1 1 0 USP8 interacting ATP-synt_E PF05680.12 ORF63389 - 1.3 9.5 6.5 1.4 9.3 6.5 1.1 1 0 0 1 1 1 0 ATP synthase E chain DUF4407 PF14362.6 ORF63389 - 1.3 8.3 6.8 1.5 8.1 6.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4559 PF15112.6 ORF63389 - 2.8 7.5 8.4 3.1 7.4 8.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) TMPIT PF07851.13 ORF63389 - 3.5 6.8 6.4 3.9 6.6 6.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein LapA_dom PF06305.11 ORF63389 - 3.7 7.4 10.4 3.8 7.4 2.9 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DUF4140 PF13600.6 ORF63389 - 3.7 8.0 9.0 4.4 7.8 5.2 2.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) BST2 PF16716.5 ORF63389 - 4.1 8.1 14.1 6.9 7.3 2.7 2.2 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Spc24 PF08286.11 ORF63389 - 4.6 7.5 9.0 15 5.9 8.9 1.7 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF2968 PF11180.8 ORF63389 - 7.1 6.2 15.7 7.9 6.1 15.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Atg14 PF10186.9 ORF63389 - 7.4 5.6 9.8 10 5.1 9.8 1.3 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PP1_bind PF15276.6 ORF63134 - 0.034 14.4 0.1 0.051 13.9 0.1 1.3 1 0 0 1 1 1 0 Protein phosphatase 1 binding Ribosomal_S17e PF00833.18 ORF62974 - 7.2e-16 58.2 0.3 8.2e-16 58.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal S17 Rab5ip PF07019.12 ORF62712 - 5.5e-07 30.1 4.5 6.4e-07 29.9 4.5 1.1 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) Receptor_IA-2 PF11548.8 ORF62525 - 0.0058 16.6 0.1 0.0064 16.4 0.1 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase receptor IA-2 Pyocin_S PF06958.12 ORF6226 - 0.87 10.1 4.7 0.87 10.1 4.7 1.1 1 0 0 1 1 1 0 S-type Pyocin Ribosomal_S17e PF00833.18 ORF6190 - 7.2e-16 58.2 0.3 8.2e-16 58.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal S17 Arg_repressor PF01316.21 ORF61342 - 0.025 14.3 0.0 0.032 14.0 0.0 1.1 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain CTP_transf_1 PF01148.20 ORF61155 - 7.7e-09 35.7 1.1 8.4e-09 35.6 1.1 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family UbiA PF01040.18 ORF61155 - 0.0079 15.5 0.6 0.0087 15.4 0.6 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family EMC3_TMCO1 PF01956.16 ORF61155 - 0.17 11.6 2.2 0.18 11.5 2.2 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like T_cell_tran_alt PF15128.6 ORF60966 - 0.05 13.4 0.1 0.055 13.3 0.1 1.2 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF5090 PF17009.5 ORF60966 - 4.3 7.3 9.1 4.8 7.1 9.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) SMAP PF15477.6 ORF60862 - 0.13 13.3 0.0 0.15 13.0 0.0 1.2 1 0 0 1 1 1 0 Small acidic protein family DUF4958 PF16319.5 ORF6058 - 0.2 9.6 0.0 0.21 9.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4958) ATP-synt_8 PF00895.20 ORF60283 - 0.014 15.9 4.6 0.019 15.4 4.6 1.3 1 0 0 1 1 1 0 ATP synthase protein 8 EF-hand_1 PF00036.32 ORF59742 - 4.2e-17 60.3 0.7 1.4e-07 30.6 0.1 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF59742 - 1.4e-16 60.7 0.1 1.5e-16 60.6 0.1 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF59742 - 7.9e-14 50.3 0.1 1.3e-06 27.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF59742 - 3.7e-13 49.1 1.1 2.4e-06 27.3 0.3 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF59742 - 4.2e-13 48.1 0.8 1.1e-05 24.7 0.1 2.3 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF59742 - 0.00018 21.8 0.1 0.00021 21.6 0.1 1.0 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF59742 - 0.0003 21.0 0.0 0.00037 20.8 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF59742 - 0.0029 17.5 0.1 0.0031 17.4 0.1 1.1 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Lip_prot_lig_C PF10437.9 ORF59742 - 0.027 14.4 0.3 0.14 12.1 0.2 1.8 1 1 1 2 2 2 0 Bacterial lipoate protein ligase C-terminus PMBR PF09373.10 ORF59742 - 0.065 13.4 0.0 20 5.5 0.0 2.7 3 0 0 3 3 3 0 Pseudomurein-binding repeat Trehalase_Ca-bi PF07492.11 ORF59742 - 0.093 12.5 0.5 0.18 11.5 0.5 1.5 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain UPF0154 PF03672.13 ORF59742 - 0.21 11.6 0.0 0.28 11.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) DUF21 PF01595.20 ORF59653 - 1.1e-08 35.0 0.1 1.3e-08 34.8 0.1 1.0 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain Prominin PF05478.11 ORF59653 - 0.38 8.6 1.2 0.44 8.4 1.2 1.0 1 0 0 1 1 1 0 Prominin D123 PF07065.14 ORF59529 - 0.06 12.5 0.1 0.065 12.4 0.1 1.0 1 0 0 1 1 1 0 D123 SDF PF00375.18 ORF5948 - 0.1 11.6 0.3 0.098 11.7 0.3 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family Ldr_toxin PF13940.6 ORF59203 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system Rsa3 PF14615.6 ORF5885 - 0.032 13.8 0.0 0.056 13.0 0.0 1.5 1 0 0 1 1 1 0 Ribosome-assembly protein 3 HEAT_UF PF18817.1 ORF5885 - 0.098 12.9 0.1 0.16 12.3 0.1 1.3 1 0 0 1 1 1 0 Repeat of uncharacterized protein PH0542 DUF1148 PF06618.11 ORF5858 - 0.054 13.7 0.1 0.062 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1148) SLATT_1 PF18181.1 ORF58259 - 0.027 14.4 0.1 0.031 14.2 0.1 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 Trp_oprn_chp PF09534.10 ORF58259 - 0.059 13.2 0.0 0.065 13.0 0.0 1.0 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Phage_Coat_Gp8 PF05371.12 ORF58259 - 0.12 12.1 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Phage major coat protein, Gp8 NUMOD1 PF07453.13 ORF58120 - 0.014 15.6 0.2 0.021 15.1 0.2 1.3 1 0 0 1 1 1 0 NUMOD1 domain GEMIN8 PF15348.6 ORF57683 - 0.81 9.9 5.4 0.85 9.9 5.4 1.0 1 0 0 1 1 1 0 Gemini of Cajal bodies-associated protein 8 Tmemb_9 PF05434.11 ORF57556 - 0.18 11.7 4.5 0.21 11.5 4.5 1.0 1 0 0 1 1 1 0 TMEM9 HTH_9 PF08221.11 ORF57453 - 0.0017 18.4 0.8 0.0023 18.0 0.2 1.5 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain LINES_N PF14694.6 ORF57372 - 0.0017 17.9 1.1 0.0017 17.9 1.1 1.0 1 0 0 1 1 1 1 Lines N-terminus DUF5439 PF17507.2 ORF57372 - 0.01 16.0 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5439) Actin PF00022.19 ORF57312 - 3.8e-18 65.3 0.0 4e-18 65.2 0.0 1.0 1 0 0 1 1 1 1 Actin Gp_dh_C PF02800.20 ORF57 - 3.6e-10 39.7 0.1 4.4e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ldr_toxin PF13940.6 ORF56906 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system Bombesin PF02044.17 ORF56647 - 0.34 11.1 0.1 0.34 11.1 0.1 1.9 2 0 0 2 2 2 0 Bombesin-like peptide NOC3p PF07540.11 ORF56515 - 0.11 13.0 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Nucleolar complex-associated protein Ldr_toxin PF13940.6 ORF56374 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system Ldr_toxin PF13940.6 ORF56235 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system NADH_dehy_S2_C PF06444.11 ORF5623 - 0.1 13.2 2.6 0.19 12.2 2.6 1.4 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus PBC PF03792.13 ORF558 - 0.013 15.3 1.2 0.014 15.1 1.2 1.1 1 0 0 1 1 1 0 PBC domain Peptidase_S49 PF01343.18 ORF558 - 0.048 13.6 0.6 0.052 13.5 0.6 1.1 1 0 0 1 1 1 0 Peptidase family S49 YlbE PF14003.6 ORF558 - 0.098 13.1 3.9 0.57 10.7 0.9 2.2 1 1 1 2 2 2 0 YlbE-like protein YlaC PF10777.9 ORF55587 - 0.15 11.9 1.9 0.18 11.6 1.9 1.1 1 0 0 1 1 1 0 Inner membrane protein YlaC DUF4525 PF15027.6 ORF55587 - 0.23 11.2 1.0 0.23 11.2 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) pP_pnuc_2 PF18166.1 ORF55515 - 0.0082 16.2 0.0 0.01 15.9 0.0 1.2 1 0 0 1 1 1 1 Predicted pPIWI-associating nuclease IBR PF01485.21 ORF55389 - 3.4e-10 40.0 9.9 3.4e-10 40.0 9.9 1.7 1 1 1 2 2 2 1 IBR domain, a half RING-finger domain Rieske PF00355.26 ORF55389 - 0.46 10.5 5.7 0.4 10.7 5.0 1.3 1 1 0 1 1 1 0 Rieske [2Fe-2S] domain Bee_toxin PF17454.2 ORF55373 - 0.013 15.5 0.7 0.026 14.6 0.7 1.5 1 0 0 1 1 1 0 Honey bee toxin CoA_binding_3 PF13727.6 ORF55362 - 3 7.8 6.6 3.3 7.7 6.6 1.2 1 0 0 1 1 1 0 CoA-binding domain DUF2767 PF10965.8 ORF55345 - 1.7e-34 117.6 1.7 1.9e-34 117.4 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2767) Toxin_14 PF07829.11 ORF54939 - 0.83 9.7 4.1 20 5.3 0.0 3.0 3 0 0 3 3 3 0 Alpha-A conotoxin PIVA-like protein Fcf1 PF04900.12 ORF54655 - 0.024 15.0 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Fcf1 SH2_2 PF14633.6 ORF53911 - 0.074 12.4 0.0 0.083 12.3 0.0 1.0 1 0 0 1 1 1 0 SH2 domain Arg_repressor PF01316.21 ORF53785 - 0.025 14.3 0.0 0.032 14.0 0.0 1.1 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain EMC3_TMCO1 PF01956.16 ORF53130 - 0.028 14.2 2.5 0.033 13.9 2.5 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like LINES_N PF14694.6 ORF52980 - 0.0017 17.9 1.1 0.0017 17.9 1.1 1.0 1 0 0 1 1 1 1 Lines N-terminus DUF5439 PF17507.2 ORF52980 - 0.01 16.0 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5439) Acyl_transf_1 PF00698.21 ORF52132 - 3.7e-05 23.4 0.0 3.9e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Acyl transferase domain DUF4131 PF13567.6 ORF51891 - 1.9 8.1 5.7 2.2 7.9 5.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2269 PF10027.9 ORF51891 - 6.6 6.8 9.3 9.5 6.3 0.3 2.1 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2269) PP1_bind PF15276.6 ORF51155 - 0.034 14.4 0.1 0.051 13.9 0.1 1.3 1 0 0 1 1 1 0 Protein phosphatase 1 binding bZIP_C PF12498.8 ORF51148 - 0.067 14.2 0.8 0.067 14.2 0.8 1.0 1 0 0 1 1 1 0 Basic leucine-zipper C terminal DUF4315 PF14193.6 ORF50739 - 0.024 14.6 0.6 0.027 14.5 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4315) DivIC PF04977.15 ORF50739 - 0.22 11.3 3.2 5.8 6.8 0.0 2.1 2 0 0 2 2 2 0 Septum formation initiator # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks359.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks359.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks359.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks359.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:22:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TRP PF06011.12 ORF13627 - 3.9e-05 22.6 6.6 6.2e-05 21.9 6.6 1.3 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel GPI-anchored PF10342.9 ORF111656 - 8.5e-06 26.5 0.0 1.9e-05 25.3 0.0 1.6 1 0 0 1 1 1 1 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family AsmA_2 PF13502.6 ORF106217 - 0.017 14.7 0.1 0.037 13.6 0.1 1.6 1 1 0 1 1 1 0 AsmA-like C-terminal region Carboxyl_trans PF01039.22 ORF102577 - 1.1e-111 373.9 0.1 1.3e-111 373.7 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain Arm-DNA-bind_3 PF13356.6 NODE_16648_length_1087_cov_2.467681_g12656_i0forward_frame_1 - 3.3e-20 72.2 0.3 5.3e-20 71.6 0.3 1.3 1 0 0 1 1 1 1 Arm DNA-binding domain DOG1 PF14144.6 NODE_16647_length_1087_cov_2.721483_g12655_i0reverse_frame_1 - 0.087 13.1 0.2 0.15 12.3 0.2 1.4 1 0 0 1 1 1 0 Seed dormancy control Ilm1 PF10311.9 NODE_16621_length_1088_cov_5.819563_g11797_i1forward_frame_1 - 0.009 15.7 0.3 0.015 15.0 0.3 1.4 1 0 0 1 1 1 1 Increased loss of mitochondrial DNA protein 1 HSP33 PF01430.19 NODE_16619_length_1088_cov_43.677113_g12634_i0reverse_frame_1 - 0.044 13.2 0.9 1.7 8.0 0.1 2.4 1 1 0 2 2 2 0 Hsp33 protein Glyco_hydro_38N PF01074.22 NODE_16599_length_1088_cov_1002.465337_g12620_i0reverse_frame_1 - 6.5e-76 255.4 8.0 7.7e-76 255.2 8.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 NODE_16599_length_1088_cov_1002.465337_g12620_i0reverse_frame_1 - 5.9e-09 36.0 0.0 1.8e-08 34.4 0.0 1.9 1 0 0 1 1 1 1 Alpha mannosidase middle domain Polysacc_deac_1 PF01522.21 NODE_16599_length_1088_cov_1002.465337_g12620_i0reverse_frame_1 - 0.00058 19.8 0.1 0.0013 18.7 0.1 1.6 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 NODE_16599_length_1088_cov_1002.465337_g12620_i0reverse_frame_1 - 0.016 14.4 1.1 0.022 14.0 1.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 YkyA PF10368.9 NODE_16599_length_1088_cov_1002.465337_g12620_i0reverse_frame_1 - 0.19 11.4 1.7 1.6 8.4 0.2 2.4 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein Herpes_U34 PF04541.13 NODE_16565_length_1090_cov_2.291943_g12593_i0reverse_frame_3 - 0.034 13.4 0.0 0.055 12.7 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus virion protein U34 ZZ PF00569.17 NODE_16565_length_1090_cov_2.291943_g12593_i0forward_frame_3 - 0.011 15.6 2.0 0.015 15.1 0.3 2.3 2 0 0 2 2 2 0 Zinc finger, ZZ type Tub PF01167.18 NODE_16538_length_1091_cov_95.867424_g12569_i0forward_frame_3 - 1e-34 120.4 0.0 6.5e-34 117.7 0.0 2.0 1 1 0 1 1 1 1 Tub family DUF3527 PF12043.8 NODE_16538_length_1091_cov_95.867424_g12569_i0forward_frame_3 - 0.021 14.4 0.0 0.035 13.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3527) PARP_reg PF02877.14 ORF95297 - 1e-38 132.5 5.1 1e-38 132.5 5.1 1.7 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase, regulatory domain WGR PF05406.15 ORF95297 - 3.3e-17 62.3 0.2 3.3e-17 62.3 0.2 2.5 2 0 0 2 2 2 1 WGR domain T2SS_PulS_OutS PF09691.10 ORF95297 - 0.2 11.9 0.2 0.2 11.9 0.2 2.9 3 1 0 3 3 3 0 Type II secretion system pilotin lipoprotein (PulS_OutS) TANGO2 PF05742.12 ORF95297 - 0.29 11.2 5.1 0.64 10.0 5.1 1.6 1 1 0 1 1 1 0 Transport and Golgi organisation 2 UvrA_inter PF17760.1 ORF95297 - 0.37 10.9 6.6 1.1 9.4 0.9 3.0 2 1 0 3 3 3 0 UvrA interaction domain Erythrovirus_X PF06795.11 ORF94849 - 0.2 12.0 0.1 19 5.7 0.1 2.5 2 0 0 2 2 2 0 Erythrovirus X protein UAA PF08449.11 ORF89735 - 7.2e-55 186.3 19.7 8.7e-55 186.0 19.7 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF89735 - 0.0011 19.2 25.2 0.11 12.7 9.4 2.2 2 0 0 2 2 2 2 EamA-like transporter family Pex24p PF06398.11 ORF89735 - 0.0071 15.4 0.1 0.013 14.6 0.1 1.3 1 0 0 1 1 1 1 Integral peroxisomal membrane peroxin F_bP_aldolase PF01116.20 ORF8668 - 4.7e-86 288.7 0.0 5.3e-86 288.6 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Torsin PF06309.11 ORF8668 - 0.15 12.2 0.0 0.83 9.8 0.0 2.0 2 0 0 2 2 2 0 Torsin PARP_reg PF02877.14 ORF8564 - 1e-38 132.5 5.1 1e-38 132.5 5.1 1.7 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase, regulatory domain WGR PF05406.15 ORF8564 - 3.3e-17 62.3 0.2 3.3e-17 62.3 0.2 2.5 2 0 0 2 2 2 1 WGR domain T2SS_PulS_OutS PF09691.10 ORF8564 - 0.2 11.9 0.2 0.2 11.9 0.2 2.9 3 1 0 3 3 3 0 Type II secretion system pilotin lipoprotein (PulS_OutS) TANGO2 PF05742.12 ORF8564 - 0.29 11.2 5.1 0.64 10.0 5.1 1.6 1 1 0 1 1 1 0 Transport and Golgi organisation 2 UvrA_inter PF17760.1 ORF8564 - 0.37 10.9 6.6 1.1 9.4 0.9 3.0 2 1 0 3 3 3 0 UvrA interaction domain MFS_1 PF07690.16 ORF80620 - 5.4e-18 65.0 24.8 2.2e-14 53.2 17.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily RTC PF01137.21 ORF7978 - 2.9e-28 98.6 0.0 4e-28 98.1 0.0 1.2 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase F_bP_aldolase PF01116.20 ORF74253 - 4.7e-86 288.7 0.0 5.3e-86 288.6 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Torsin PF06309.11 ORF74253 - 0.15 12.2 0.0 0.83 9.8 0.0 2.0 2 0 0 2 2 2 0 Torsin Herpes_UL52 PF03121.15 ORF70645 - 4.1e-06 26.6 0.1 7.9e-06 25.7 0.1 1.4 1 0 0 1 1 1 1 Herpesviridae UL52/UL70 DNA primase Abhydrolase_3 PF07859.13 ORF63829 - 2.2e-40 138.7 0.0 2.9e-40 138.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF63829 - 1.5e-12 47.1 0.0 1.1e-10 40.9 0.0 2.2 2 0 0 2 2 2 2 Steryl acetyl hydrolase Hydrolase_4 PF12146.8 ORF63829 - 0.00011 21.5 0.0 0.00037 19.8 0.0 1.9 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Lipase_3 PF01764.25 ORF6009 - 7.1e-25 87.5 0.0 1.2e-24 86.8 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 ORF6009 - 0.0052 16.5 0.0 0.014 15.1 0.0 1.8 3 0 0 3 3 3 1 PGAP1-like protein DUF676 PF05057.14 ORF6009 - 0.096 12.2 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF6009 - 0.099 12.5 0.0 0.19 11.6 0.0 1.5 2 0 0 2 2 2 0 Palmitoyl protein thioesterase GrpE PF01025.19 ORF56180 - 1.4e-25 89.8 0.4 1.4e-25 89.8 0.4 4.3 1 1 2 3 3 3 1 GrpE DUF2935 PF11155.8 ORF56180 - 0.0011 19.3 1.3 0.0011 19.3 1.3 2.8 1 1 0 2 2 2 1 Domain of unknown function (DUF2935) Spc7 PF08317.11 ORF56180 - 0.0064 15.4 53.3 0.0081 15.1 16.2 3.0 1 1 2 3 3 3 3 Spc7 kinetochore protein PspA_IM30 PF04012.12 ORF56180 - 0.01 15.4 3.8 0.01 15.4 3.8 3.0 2 1 0 2 2 2 0 PspA/IM30 family Synaptobrevin PF00957.21 ORF56180 - 0.023 14.5 1.4 0.023 14.5 1.4 3.4 3 1 1 5 5 5 0 Synaptobrevin HALZ PF02183.18 ORF56180 - 0.045 14.0 0.9 0.045 14.0 0.9 5.1 4 1 1 5 5 5 0 Homeobox associated leucine zipper GAS PF13851.6 ORF56180 - 0.063 12.6 51.1 0.18 11.1 8.1 3.1 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding HAUS-augmin3 PF14932.6 ORF56180 - 0.16 11.6 47.7 0.029 14.0 16.0 3.2 1 1 2 3 3 3 0 HAUS augmin-like complex subunit 3 DUF1664 PF07889.12 ORF56180 - 5.3 7.1 21.5 0.73 9.9 4.5 3.8 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) DUF812 PF05667.11 ORF56180 - 7 5.4 39.0 13 4.6 39.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF812) LMBR1 PF04791.16 ORF53081 - 2.1e-13 50.1 21.7 2.7e-10 39.8 21.7 2.0 1 1 0 1 1 1 1 LMBR1-like membrane protein Ni_hydr_CYTB PF01292.20 ORF53081 - 0.0026 17.4 4.0 0.0031 17.1 1.7 2.2 2 0 0 2 2 2 1 Prokaryotic cytochrome b561 MFS_1 PF07690.16 ORF51644 - 4.4e-24 85.1 25.3 4.8e-19 68.5 17.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF51644 - 1.6e-12 47.4 13.5 2.1e-12 47.0 13.5 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 ORF51644 - 0.00036 19.2 1.9 0.00049 18.8 1.0 1.7 1 1 0 1 1 1 1 MFS/sugar transport protein MARVEL PF01284.23 ORF51644 - 0.0034 17.4 2.5 0.0034 17.4 2.5 3.4 1 1 2 3 3 3 1 Membrane-associating domain EphA2_TM PF14575.6 ORF51644 - 0.073 14.0 0.0 30 5.6 0.0 2.6 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Pam17 PF08566.10 ORF51644 - 0.31 10.9 0.4 7.1 6.5 0.0 2.2 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 ATG22 PF11700.8 ORF51644 - 0.45 9.1 7.5 0.34 9.5 4.1 2.3 1 1 0 2 2 2 0 Vacuole effluxer Atg22 like RHD3 PF05879.12 ORF35624 - 2.9e-99 333.2 4.9 3.3e-99 333.0 4.9 1.0 1 0 0 1 1 1 1 Root hair defective 3 GTP-binding protein (RHD3) MMR_HSR1 PF01926.23 ORF35624 - 3.8e-06 26.9 0.1 9.4e-06 25.7 0.1 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 ORF35624 - 0.00029 20.9 0.1 0.0048 17.0 0.0 2.6 1 1 1 2 2 2 1 Dynamin family GBP PF02263.19 ORF35624 - 0.0005 19.4 1.3 0.0011 18.3 1.3 1.6 1 1 0 1 1 1 1 Guanylate-binding protein, N-terminal domain AAA_28 PF13521.6 ORF35624 - 0.0021 18.3 0.0 0.0058 16.9 0.0 1.9 1 0 0 1 1 1 1 AAA domain Roc PF08477.13 ORF35624 - 0.0034 17.6 0.0 0.0079 16.4 0.0 1.7 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF35624 - 0.059 13.0 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 Ras family FtsK_SpoIIIE PF01580.18 ORF35624 - 0.095 12.0 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family ABC_tran PF00005.27 ORF35624 - 0.11 12.9 0.8 0.23 12.0 0.6 1.9 1 1 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 ORF35624 - 0.12 12.2 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Iso_dh PF00180.20 ORF33229 - 3.1e-139 464.0 0.0 3.5e-139 463.8 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase CAP PF00188.26 ORF32865 - 3.3e-09 37.6 0.1 8.9e-09 36.3 0.0 1.8 2 0 0 2 2 2 1 Cysteine-rich secretory protein family Glyco_hydro_38N PF01074.22 ORF23518 - 1.4e-09 37.8 0.4 2.3e-09 37.0 0.4 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Radical_SAM PF04055.21 ORF22061 - 4.2e-11 43.5 0.0 7.5e-11 42.7 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 ORF22061 - 0.014 15.6 0.0 0.027 14.6 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain Fer4_12 PF13353.6 ORF22061 - 0.18 12.1 0.0 0.33 11.2 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain PKcGMP_CC PF16808.5 ORF20961 - 0.081 12.8 0.6 0.26 11.2 0.6 1.9 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase PDZ PF00595.24 ORF20523 - 2.8e-10 40.4 0.0 0.00012 22.3 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF20523 - 6.3e-09 35.6 0.0 2.3e-05 24.1 0.0 2.3 2 0 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF20523 - 8.9e-05 22.7 0.0 0.0029 17.9 0.0 2.3 2 0 0 2 2 2 1 PDZ domain Zip PF02535.22 ORF20523 - 1.4 8.1 6.4 1.7 7.8 6.4 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter SLC12 PF03522.15 ORF20523 - 2.4 7.1 9.7 4 6.3 9.7 1.4 1 0 0 1 1 1 0 Solute carrier family 12 ZZ PF00569.17 ORF10479 - 0.00032 20.5 1.0 0.00065 19.5 1.0 1.5 1 0 0 1 1 1 1 Zinc finger, ZZ type N_BRCA1_IG PF16158.5 ORF10479 - 0.0011 19.7 0.3 0.0043 17.8 0.0 2.1 2 1 0 2 2 2 1 Ig-like domain from next to BRCA1 gene Peptidase_S66 PF02016.15 ORF10479 - 0.17 12.0 1.0 0.44 10.7 0.0 2.2 3 0 0 3 3 3 0 LD-carboxypeptidase N-terminal domain NPBW PF15180.6 ORF10479 - 0.45 10.4 4.6 0.52 10.2 2.4 2.1 2 1 0 2 2 2 0 Neuropeptides B and W SAGA-Tad1 PF12767.7 ORF10479 - 1.1 8.9 12.8 1.9 8.2 12.8 1.4 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit Cyclotide PF03784.13 NODE_16718_length_1084_cov_254.684461_g12713_i0reverse_frame_1 - 0.057 13.5 1.5 0.37 10.9 1.5 2.5 1 0 0 1 1 1 0 Cyclotide family ADH_N PF08240.12 NODE_16647_length_1087_cov_2.721483_g12655_i0reverse_frame_2 - 4.8e-29 100.4 8.0 4.8e-29 100.4 8.0 1.9 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 NODE_16647_length_1087_cov_2.721483_g12655_i0reverse_frame_2 - 3.2e-24 85.4 1.0 6.1e-24 84.5 1.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 NODE_16647_length_1087_cov_2.721483_g12655_i0reverse_frame_2 - 1.8e-05 25.8 0.2 3.2e-05 25.0 0.2 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase cobW PF02492.19 NODE_16647_length_1087_cov_2.721483_g12655_i0reverse_frame_2 - 0.013 15.1 1.4 0.44 10.1 0.1 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF2284 PF10050.9 NODE_16647_length_1087_cov_2.721483_g12655_i0reverse_frame_2 - 0.28 10.9 1.9 0.64 9.8 0.4 2.1 2 0 0 2 2 2 0 Predicted metal-binding protein (DUF2284) PPPI_inhib PF14895.6 NODE_16616_length_1088_cov_160.100665_g12632_i0forward_frame_3 - 6.9e-09 35.3 0.2 1.1e-08 34.7 0.2 1.3 1 0 0 1 1 1 1 Protein phosphatase 1 inhibitor IBN_N PF03810.19 NODE_16599_length_1088_cov_1002.465337_g12620_i0reverse_frame_2 - 0.016 15.1 0.2 0.044 13.7 0.2 1.7 1 0 0 1 1 1 0 Importin-beta N-terminal domain zf-CCCH_7 PF18586.1 NODE_16599_length_1088_cov_1002.465337_g12620_i0forward_frame_3 - 6.3 7.2 6.9 37 4.8 0.1 3.3 2 1 1 3 3 3 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 His_kinase PF06580.13 ORF98073 - 6.5e-26 90.5 1.6 1.2e-25 89.6 1.6 1.5 1 0 0 1 1 1 1 Histidine kinase GAF_2 PF13185.6 ORF98073 - 6.7e-07 29.7 0.0 1.3e-06 28.7 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 ORF98073 - 1.1e-05 25.8 0.0 4.4e-05 23.8 0.0 2.0 2 0 0 2 2 2 1 GAF domain HATPase_c PF02518.26 ORF98073 - 0.00025 21.5 0.0 0.012 16.1 0.0 2.4 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SpoVT_C PF15714.5 ORF98073 - 0.00028 20.9 0.0 0.00066 19.7 0.0 1.6 1 0 0 1 1 1 1 Stage V sporulation protein T C-terminal, transcription factor DUF3958 PF13125.6 ORF98073 - 0.43 10.8 4.0 0.21 11.8 1.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3958) MTS PF05175.14 ORF94041 - 0.14 11.7 0.0 0.3 10.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_4 PF02390.17 ORF94041 - 0.2 11.1 0.0 0.32 10.4 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase ABC_tran PF00005.27 ORF93948 - 2.2e-32 112.4 0.0 3.4e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF93948 - 5.7e-09 35.7 0.9 1e-06 28.4 0.9 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF93948 - 2.7e-05 24.5 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF93948 - 0.00011 22.1 0.2 0.0002 21.2 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF93948 - 0.00031 21.2 0.3 0.00097 19.6 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF93948 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF93948 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF93948 - 0.0027 17.8 0.4 0.0078 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF93948 - 0.0036 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF93948 - 0.0043 17.2 2.0 0.081 13.2 0.7 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF93948 - 0.014 15.9 0.3 0.042 14.4 0.1 1.9 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF93948 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF93948 - 0.022 14.7 0.0 0.16 11.9 0.0 2.1 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF93948 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF93948 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF93948 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF93948 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF93948 - 0.053 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 ORF93948 - 0.07 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 ORF93948 - 0.12 12.8 0.0 17 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF93948 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region Mad3_BUB1_I PF08311.12 ORF93220 - 1.7e-25 89.4 0.1 3.1e-25 88.6 0.1 1.4 1 0 0 1 1 1 1 Mad3/BUB1 homology region 1 DUF4602 PF15375.6 ORF93220 - 0.098 13.0 0.6 0.19 12.0 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4602) ABC_tran PF00005.27 ORF86573 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF86573 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF86573 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF86573 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF86573 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF86573 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF86573 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF86573 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF86573 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF86573 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF86573 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF86573 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF86573 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF86573 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF86573 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF86573 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF86573 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF86573 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF86573 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF86573 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF86573 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF86573 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF86573 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region ABC_tran PF00005.27 ORF84163 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF84163 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF84163 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF84163 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF84163 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF84163 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF84163 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF84163 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF84163 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF84163 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF84163 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF84163 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF84163 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF84163 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF84163 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF84163 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF84163 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF84163 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF84163 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF84163 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF84163 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF84163 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF84163 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region DPBB_1 PF03330.18 ORF78271 - 2e-20 72.9 0.0 4.8e-20 71.6 0.0 1.6 1 0 0 1 1 1 1 Lytic transglycolase SPOR PF05036.13 ORF78271 - 6.8e-17 61.6 2.2 1.7e-16 60.4 2.2 1.7 1 0 0 1 1 1 1 Sporulation related domain Bestrophin PF01062.21 ORF71246 - 3.4e-10 39.8 0.0 5.9e-10 39.0 0.0 1.4 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF1959 PF09218.10 ORF71246 - 0.02 15.0 0.1 0.13 12.4 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1959) HTH_32 PF13565.6 ORF71246 - 2.5 8.8 4.8 4.4 8.0 3.6 2.1 1 1 1 2 2 2 0 Homeodomain-like domain Metallophos PF00149.28 ORF71096 - 7.1e-21 75.7 0.2 1.2e-20 74.9 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Sugar_tr PF00083.24 ORF68863 - 7.3e-24 84.4 4.0 9.1e-24 84.1 4.0 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF68863 - 4.4e-14 52.2 43.0 1.3e-10 40.8 24.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Pkinase PF00069.25 ORF62577 - 1e-52 179.1 0.0 1.3e-52 178.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62577 - 2.3e-27 95.9 0.0 3.3e-27 95.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF62577 - 1.4e-06 27.4 0.0 2.1e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF62577 - 5.3e-05 23.3 0.5 0.0082 16.1 0.0 2.6 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF62577 - 0.00015 21.2 0.0 0.0003 20.2 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF62577 - 0.0031 16.9 0.0 0.0057 16.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF62577 - 0.0064 16.1 0.0 0.013 15.1 0.0 1.6 2 0 0 2 2 2 1 RIO1 family Haspin_kinase PF12330.8 ORF62577 - 0.035 13.1 0.0 0.053 12.5 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain SH3_3 PF08239.11 ORF58744 - 5.1e-09 36.3 1.7 0.00035 20.8 0.2 2.8 3 0 0 3 3 3 2 Bacterial SH3 domain Ank_4 PF13637.6 ORF58744 - 1.5e-05 25.4 0.0 0.004 17.7 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF58744 - 8.6e-05 23.1 0.0 0.00044 20.8 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF58744 - 0.007 16.7 0.1 0.49 10.8 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF58744 - 0.082 13.5 0.3 1.3 9.9 0.0 3.0 3 0 0 3 3 3 0 Ankyrin repeat DUF1204 PF06721.11 ORF58744 - 0.094 12.1 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1204) SH3_4 PF06347.13 ORF58744 - 0.12 12.3 3.5 0.19 11.6 0.5 2.8 2 0 0 2 2 2 0 Bacterial SH3 domain Metallophos PF00149.28 ORF58417 - 7.1e-21 75.6 0.2 1.2e-20 74.9 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Exostosin PF03016.15 ORF56639 - 1e-19 70.9 0.1 1.4e-19 70.4 0.1 1.2 1 0 0 1 1 1 1 Exostosin family ABC_tran PF00005.27 ORF55649 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF55649 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF55649 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF55649 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF55649 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF55649 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF55649 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF55649 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF55649 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF55649 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF55649 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF55649 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF55649 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF55649 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF55649 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF55649 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF55649 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF55649 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF55649 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF55649 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF55649 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF55649 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF55649 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region SH3_3 PF08239.11 ORF48720 - 5.1e-09 36.3 1.7 0.00035 20.8 0.2 2.8 3 0 0 3 3 3 2 Bacterial SH3 domain Ank_4 PF13637.6 ORF48720 - 1.5e-05 25.4 0.0 0.004 17.7 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF48720 - 8.6e-05 23.1 0.0 0.00044 20.8 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF48720 - 0.007 16.7 0.1 0.49 10.8 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF48720 - 0.082 13.5 0.3 1.3 9.9 0.0 3.0 3 0 0 3 3 3 0 Ankyrin repeat DUF1204 PF06721.11 ORF48720 - 0.094 12.1 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1204) SH3_4 PF06347.13 ORF48720 - 0.12 12.3 3.5 0.19 11.6 0.5 2.8 2 0 0 2 2 2 0 Bacterial SH3 domain ABC_tran PF00005.27 ORF48692 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF48692 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF48692 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF48692 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF48692 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF48692 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF48692 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF48692 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF48692 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF48692 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF48692 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF48692 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF48692 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF48692 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF48692 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF48692 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF48692 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF48692 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF48692 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF48692 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF48692 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF48692 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF48692 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region Exostosin PF03016.15 ORF44872 - 1.9e-18 66.8 0.0 2.6e-18 66.3 0.0 1.2 1 0 0 1 1 1 1 Exostosin family Glyco_transf_25 PF01755.17 ORF44832 - 3.6e-28 98.8 0.0 5.5e-26 91.7 0.0 2.3 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) ABC_tran PF00005.27 ORF42162 - 4.5e-33 114.7 0.0 7e-33 114.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF42162 - 6.6e-09 35.5 1.1 1.2e-06 28.1 1.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF42162 - 2.9e-05 24.4 0.0 0.0029 17.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF42162 - 9.1e-05 22.3 0.2 0.00018 21.3 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF42162 - 0.00023 21.6 0.3 0.00095 19.6 0.3 2.1 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF42162 - 0.00026 20.3 0.0 0.00041 19.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF42162 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF42162 - 0.0021 18.2 0.0 0.0081 16.3 0.0 1.9 2 1 0 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF42162 - 0.0029 16.8 0.0 0.0033 16.6 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF42162 - 0.004 17.4 2.0 0.081 13.2 0.7 3.1 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF42162 - 0.0044 17.6 0.4 0.02 15.5 0.2 2.2 2 1 0 2 2 1 1 AAA domain AAA_5 PF07728.14 ORF42162 - 0.018 15.1 0.0 0.15 12.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.18 ORF42162 - 0.025 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_21 PF13304.6 ORF42162 - 0.026 14.3 0.3 0.16 11.7 0.0 2.4 2 1 1 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system IstB_IS21 PF01695.17 ORF42162 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF42162 - 0.037 13.5 0.0 0.07 12.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Rad17 PF03215.15 ORF42162 - 0.039 13.9 0.0 0.3 11.0 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain Pox_A32 PF04665.12 ORF42162 - 0.04 13.4 0.0 0.54 9.7 0.0 2.1 2 0 0 2 2 2 0 Poxvirus A32 protein RsgA_GTPase PF03193.16 ORF42162 - 0.055 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF42162 - 0.064 13.0 0.0 0.17 11.6 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF42162 - 0.082 12.6 0.0 1.6 8.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF42162 - 0.099 13.1 0.7 0.61 10.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain AAA PF00004.29 ORF42162 - 0.1 13.0 0.0 13 6.2 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 ORF42162 - 0.17 12.3 0.0 0.69 10.3 0.0 2.0 2 0 0 2 2 2 0 RNA helicase ABC_membrane PF00664.23 ORF42162 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region LpxB PF02684.15 ORF3865 - 0.01 14.7 0.0 0.028 13.3 0.0 1.7 1 1 0 1 1 1 1 Lipid-A-disaccharide synthetase Asp_Arg_Hydrox PF05118.15 ORF35728 - 2.4e-19 69.7 0.0 4.4e-19 68.9 0.0 1.4 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase PikAIV_N PF18605.1 ORF35728 - 0.0045 16.5 1.4 0.0045 16.5 1.4 2.1 2 0 0 2 2 2 1 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Metallophos PF00149.28 ORF30585 - 7.1e-21 75.6 0.2 1.2e-20 74.9 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase CLN3 PF02487.17 ORF24059 - 2e-52 178.6 8.9 2.4e-52 178.4 8.9 1.0 1 0 0 1 1 1 1 CLN3 protein FlhD PF05247.13 ORF24059 - 0.18 12.1 0.1 0.32 11.3 0.1 1.4 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) Fmp27_WPPW PF10359.9 ORF2230 - 0.053 12.4 1.5 0.07 12.0 1.5 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Suppressor_APC PF11414.8 ORF2230 - 0.56 10.3 7.5 2.4 8.3 7.5 2.1 1 1 0 1 1 1 0 Adenomatous polyposis coli tumour suppressor protein TANGO2 PF05742.12 ORF14919 - 1.1e-16 61.7 1.0 1.1e-16 61.7 1.0 1.9 2 1 0 2 2 2 1 Transport and Golgi organisation 2 Methyltransf_21 PF05050.12 ORF13263 - 5e-06 26.6 0.0 6.9e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase FkbM domain ABC_tran PF00005.27 ORF111894 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF111894 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF111894 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF111894 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF111894 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF111894 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF111894 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF111894 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF111894 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF111894 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF111894 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF111894 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF111894 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF111894 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF111894 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF111894 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF111894 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF111894 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF111894 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF111894 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF111894 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF111894 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF111894 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region DUF1682 PF07946.14 ORF111176 - 2.8e-63 214.1 4.3 3.4e-63 213.8 4.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1682) FAM176 PF14851.6 ORF111176 - 0.03 14.0 6.8 0.055 13.1 6.8 1.4 1 0 0 1 1 1 0 FAM176 family AbiH PF14253.6 ORF111176 - 0.26 11.1 8.2 0.45 10.3 8.2 1.2 1 0 0 1 1 1 0 Bacteriophage abortive infection AbiH Rab15_effector PF15208.6 ORF111176 - 1.1 8.5 0.0 1.1 8.5 0.0 2.7 3 0 0 3 3 3 0 Rab15 effector TERB2 PF15101.6 ORF111176 - 2.1 8.4 7.3 3.3 7.7 7.3 1.2 1 0 0 1 1 1 0 Telomere-associated protein TERB2 CENP-B_dimeris PF09026.10 ORF111176 - 3.1 8.2 5.2 25 5.4 0.5 2.5 2 1 0 2 2 2 0 Centromere protein B dimerisation domain GGDEF PF00990.21 NODE_16684_length_1086_cov_2.303520_g12685_i0reverse_frame_3 - 3.9e-42 143.7 0.0 7.8e-42 142.8 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 NODE_16684_length_1086_cov_2.303520_g12685_i0reverse_frame_3 - 0.00092 19.5 0.0 0.0066 16.7 0.0 2.1 2 0 0 2 2 2 1 GGDEF-like domain DUF1804 PF08822.11 NODE_16684_length_1086_cov_2.303520_g12685_i0reverse_frame_3 - 0.025 14.6 0.0 0.09 12.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1804) Peptidase_C2 PF00648.21 ORF97799 - 5.4e-12 45.4 0.4 9.5e-12 44.5 0.4 1.4 1 0 0 1 1 1 1 Calpain family cysteine protease DUF547 PF04784.14 ORF97799 - 0.088 12.8 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF547 Metallophos PF00149.28 ORF97411 - 7e-21 75.7 0.2 1.2e-20 74.9 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase MFS_1 PF07690.16 ORF96932 - 7.6e-17 61.3 27.8 7.6e-17 61.3 27.8 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Fst_toxin PF13955.6 ORF96932 - 0.051 13.5 0.3 0.14 12.1 0.3 1.7 1 0 0 1 1 1 0 Toxin Fst, type I toxin-antitoxin system Ion_trans PF00520.31 ORF91126 - 1.9e-15 56.7 24.0 2.5e-15 56.4 24.0 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF91126 - 4e-07 29.1 26.9 4.2e-06 25.7 13.8 2.1 1 1 1 2 2 2 2 Polycystin cation channel PGG PF13962.6 ORF91126 - 0.028 14.2 3.9 0.039 13.8 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function FidL_like PF15941.5 ORF83214 - 0.027 14.9 0.3 0.027 14.9 0.3 3.1 3 0 0 3 3 3 0 FidL-like putative membrane protein RibD_C PF01872.17 ORF82843 - 3.3e-64 216.4 0.0 4.5e-64 216.0 0.0 1.2 1 0 0 1 1 1 1 RibD C-terminal domain dCMP_cyt_deam_1 PF00383.23 ORF82843 - 7.6e-22 77.1 0.4 1.1e-21 76.6 0.4 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 ORF82843 - 9.9e-13 48.0 0.0 1.5e-12 47.5 0.0 1.3 1 0 0 1 1 1 1 MafB19-like deaminase Inv-AAD PF18785.1 ORF82843 - 0.0025 17.7 0.1 0.019 14.8 0.1 2.1 1 1 0 1 1 1 1 Invertebrate-AID/APOBEC-deaminase APOBEC_N PF08210.11 ORF82843 - 0.1 12.5 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 APOBEC-like N-terminal domain Mito_carr PF00153.27 ORF81619 - 2.3e-43 146.0 7.3 1.6e-13 50.4 0.0 5.1 4 1 1 5 5 5 5 Mitochondrial carrier protein UPF0020 PF01170.18 ORF7450 - 1.3e-24 87.0 0.0 3.8e-24 85.5 0.0 1.8 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.6 ORF7450 - 5.9e-13 48.9 0.0 8.7e-13 48.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF7450 - 1.1e-11 45.3 0.0 2.5e-11 44.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF7450 - 5.4e-09 36.6 0.0 1.2e-08 35.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain THUMP PF02926.17 ORF7450 - 2.1e-05 24.6 0.0 3.7e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 THUMP domain MTS PF05175.14 ORF7450 - 0.0003 20.4 0.0 0.00049 19.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 ORF7450 - 0.0008 18.9 0.0 0.0014 18.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) AviRa PF11599.8 ORF7450 - 0.0014 18.1 0.0 1.6 8.2 0.0 2.2 1 1 1 2 2 2 2 RRNA methyltransferase AviRa Ubie_methyltran PF01209.18 ORF7450 - 0.0019 17.6 0.0 0.003 16.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family N6_Mtase PF02384.16 ORF7450 - 0.0074 15.6 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_12 PF08242.12 ORF7450 - 0.008 16.9 0.0 0.015 16.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 ORF7450 - 0.035 13.7 0.0 0.056 13.1 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Epimerase PF01370.21 ORF69680 - 2.5e-21 76.2 0.0 5.2e-21 75.2 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF69680 - 5.9e-21 74.7 0.0 7.9e-21 74.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF69680 - 2e-15 57.0 0.0 2.8e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF69680 - 8.8e-11 41.5 0.0 1.2e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF69680 - 3.6e-10 40.0 0.0 7.6e-10 39.0 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF69680 - 3.2e-09 36.3 0.1 1.8e-08 33.8 0.1 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF69680 - 3.9e-06 26.9 0.0 6.2e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 ORF69680 - 0.00013 21.1 0.1 0.00023 20.3 0.1 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 ORF69680 - 0.001 18.7 0.0 0.0039 16.8 0.0 1.8 2 0 0 2 2 2 1 NmrA-like family adh_short PF00106.25 ORF69680 - 0.0017 17.9 0.1 0.0037 16.8 0.1 1.6 1 1 0 1 1 1 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF69680 - 0.0094 16.2 0.1 0.079 13.2 0.1 2.1 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Na_H_Exchanger PF00999.21 ORF69212 - 2.4e-29 102.3 22.9 2.9e-29 102.0 22.9 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF3333 PF11812.8 ORF69212 - 0.028 14.6 0.0 0.028 14.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3333) Aldo_ket_red PF00248.21 ORF59927 - 5e-55 186.8 0.0 6e-55 186.5 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Ribosomal_60s PF00428.19 ORF58101 - 0.0067 17.0 4.0 0.02 15.5 4.0 1.8 1 0 0 1 1 1 1 60s Acidic ribosomal protein Uds1 PF15456.6 ORF58101 - 0.04 14.1 1.2 0.091 12.9 1.2 1.6 1 0 0 1 1 1 0 Up-regulated During Septation DUF760 PF05542.11 ORF58101 - 0.13 12.6 0.0 0.83 10.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF760) Frataxin_Cyay PF01491.16 ORF526 - 0.016 15.3 1.0 3 8.0 0.1 3.4 3 0 0 3 3 3 0 Frataxin-like domain Spt4 PF06093.13 ORF526 - 0.025 14.7 0.0 0.97 9.6 0.0 2.7 2 0 0 2 2 2 0 Spt4/RpoE2 zinc finger Thiolase_N PF00108.23 ORF49519 - 1.2e-64 218.2 0.1 1.7e-64 217.7 0.1 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF49519 - 2.3e-47 159.7 0.5 1e-46 157.6 0.1 2.0 2 0 0 2 2 2 1 Thiolase, C-terminal domain ACP_syn_III_C PF08541.10 ORF49519 - 0.0052 16.9 0.0 0.026 14.7 0.0 2.2 2 1 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ketoacyl-synt PF00109.26 ORF49519 - 0.0055 16.3 0.0 0.017 14.7 0.0 1.8 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain TLD PF07534.16 ORF48859 - 3.5e-07 30.5 0.0 5e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 TLD F-box PF00646.33 ORF48859 - 0.087 12.7 1.0 0.21 11.5 0.1 2.2 2 0 0 2 2 2 0 F-box domain zf-CCHC PF00098.23 ORF48546 - 0.00045 20.2 3.1 0.001 19.1 3.1 1.6 1 0 0 1 1 1 1 Zinc knuckle PIF1 PF05970.14 ORF48546 - 0.00057 19.2 0.2 0.0052 16.0 0.0 2.3 2 1 1 3 3 3 1 PIF1-like helicase UvrD_C_2 PF13538.6 ORF48546 - 0.067 13.0 0.2 0.27 11.1 0.2 2.1 1 1 0 1 1 1 0 UvrD-like helicase C-terminal domain zf-CCHC_2 PF13696.6 ORF48546 - 2.2 8.2 8.2 0.085 12.7 1.8 1.9 2 0 0 2 2 2 0 Zinc knuckle Patatin PF01734.22 ORF43175 - 3.7e-21 76.3 0.3 5.4e-21 75.7 0.3 1.2 1 0 0 1 1 1 1 Patatin-like phospholipase Piezo_RRas_bdg PF12166.8 ORF42176 - 2e-56 192.1 3.3 2.3e-56 191.9 3.3 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF975 PF06161.11 ORF42176 - 0.028 14.2 0.4 0.048 13.4 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF975) THF_DHG_CYH PF00763.23 ORF41679 - 0.00079 19.7 0.0 0.0017 18.6 0.0 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TniQ PF06527.11 ORF41679 - 0.012 16.3 1.4 0.16 12.7 0.0 2.4 2 0 0 2 2 2 0 TniQ DUF3343 PF11823.8 ORF41679 - 0.22 11.0 2.5 0.67 9.5 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3343) TPR_12 PF13424.6 ORF3918 - 1.4e-19 70.1 5.6 3.4e-08 33.6 0.0 4.3 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF3918 - 4.2e-13 48.5 0.3 1.5e-05 24.6 0.0 5.1 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF3918 - 1.1e-11 43.9 4.9 0.0014 18.6 0.0 5.4 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF3918 - 7.1e-10 39.4 3.0 0.00096 19.7 0.2 4.6 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF3918 - 4.1e-09 35.8 3.1 9.3e-06 25.3 0.0 4.4 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF3918 - 9e-09 34.9 2.8 0.00027 20.9 0.0 5.0 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF3918 - 7.8e-08 31.9 4.1 0.023 14.6 0.0 5.6 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF3918 - 2.4e-06 27.9 3.7 14 6.8 0.0 5.5 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF3918 - 5.3e-06 26.9 0.7 1.7 9.2 0.0 4.5 3 1 2 5 5 5 3 Tetratricopeptide repeat TPR_4 PF07721.14 ORF3918 - 0.0015 19.0 2.4 0.56 11.0 0.3 3.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF3918 - 0.011 16.3 1.9 25 5.8 0.0 4.7 5 0 0 5 5 4 0 Tetratricopeptide repeat PPR PF01535.20 ORF3918 - 0.3 11.4 2.0 59 4.2 0.0 4.3 6 0 0 6 6 6 0 PPR repeat TAT_signal PF10518.9 ORF35863 - 1.4 8.8 3.8 0.96 9.4 0.9 2.2 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Peptidase_M24 PF00557.24 ORF34792 - 2.3e-65 220.2 0.1 3.1e-65 219.8 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 ORF34792 - 2e-15 57.6 0.1 3.9e-15 56.7 0.1 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain BetaGal_dom3 PF13363.6 ORF34792 - 0.12 11.9 0.0 0.52 9.9 0.0 1.9 2 0 0 2 2 2 0 Beta-galactosidase, domain 3 zinc-ribbon_6 PF10005.9 ORF29122 - 1e-12 48.6 11.2 0.014 16.0 0.0 4.3 4 0 0 4 4 4 4 zinc-ribbon domain zf-RanBP PF00641.18 ORF29122 - 6.9e-12 44.5 36.5 0.00013 21.2 2.3 4.6 4 0 0 4 4 4 4 Zn-finger in Ran binding protein and others DZR PF12773.7 ORF29122 - 1.1e-05 25.4 27.8 0.019 15.0 10.8 3.0 2 2 0 2 2 2 2 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF29122 - 0.00021 20.6 31.7 0.16 11.4 3.8 6.2 6 0 0 6 6 6 3 zinc-ribbon domain RNA_POL_M_15KD PF02150.16 ORF29122 - 0.0033 17.3 31.4 0.49 10.3 1.2 5.7 4 2 1 5 5 5 4 RNA polymerases M/15 Kd subunit zinc_ribbon_10 PF10058.9 ORF29122 - 0.11 12.2 6.4 16 5.3 0.0 4.7 5 0 0 5 5 5 0 Predicted integral membrane zinc-ribbon metal-binding protein zinc_ribbon_15 PF17032.5 ORF29122 - 0.13 13.1 22.3 2.1 9.1 7.3 3.6 2 2 2 4 4 4 0 zinc-ribbon family TackOD1 PF18551.1 ORF29122 - 0.47 10.1 17.2 6.3 6.4 0.2 4.0 3 1 0 4 4 4 0 Thaumarchaeal output domain 1 zf-4CXXC_R1 PF10497.9 ORF29122 - 0.54 10.5 28.3 18 5.6 10.1 4.1 1 1 2 3 3 3 0 Zinc-finger domain of monoamine-oxidase A repressor R1 DUF1451 PF07295.11 ORF29122 - 1.5 8.8 18.9 1.4 8.9 0.1 4.4 4 0 0 4 4 4 0 Zinc-ribbon containing domain DUF35_N PF12172.8 ORF29122 - 7.9 6.5 35.3 0.23 11.4 2.5 4.7 4 2 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) PPR_2 PF13041.6 ORF28938 - 2.3e-24 85.3 0.0 1.7e-06 28.1 0.0 6.8 4 1 4 8 8 8 6 PPR repeat family PPR PF01535.20 ORF28938 - 2.2e-22 77.7 4.9 0.0028 17.8 0.0 7.1 7 0 0 7 7 7 6 PPR repeat PPR_3 PF13812.6 ORF28938 - 6.8e-22 77.3 0.0 3.7e-07 30.1 0.0 5.7 5 1 1 6 6 6 4 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF28938 - 0.00026 20.4 2.8 0.84 9.0 0.0 3.5 2 1 1 3 3 3 3 Pentacotripeptide-repeat region of PRORP DUF3654 PF12376.8 ORF28938 - 0.11 12.6 0.2 16 5.7 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3654) Aldolase PF01081.19 ORF20074 - 0.1 12.0 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 KDPG and KHG aldolase FtsX_ECD PF18075.1 ORF19490 - 5.8e-16 58.9 0.0 9.1e-16 58.3 0.0 1.3 1 0 0 1 1 1 1 FtsX extracellular domain FtsX PF02687.21 ORF19490 - 1.4e-05 25.5 3.4 1.4e-05 25.5 3.4 2.8 3 0 0 3 3 3 1 FtsX-like permease family Mito_morph_reg PF14972.6 ORF19390 - 0.0012 18.4 0.7 4.2 7.0 0.0 3.2 3 0 0 3 3 3 3 Mitochondrial morphogenesis regulator DUF4052 PF13261.6 ORF19390 - 0.16 11.8 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4052) NDUF_B6 PF09782.9 ORF17946 - 0.01 16.0 1.0 0.01 16.0 1.0 1.9 2 0 0 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit RP-C_C PF11800.8 ORF17946 - 2.6 8.1 13.0 0.27 11.3 5.1 2.4 2 0 0 2 2 2 0 Replication protein C C-terminal region MatE PF01554.18 ORF16688 - 1.4e-20 73.5 11.0 4.1e-16 59.1 5.0 2.4 2 0 0 2 2 2 2 MatE ZZ PF00569.17 ORF111472 - 3.9e-09 36.2 9.3 1e-08 34.8 9.3 1.6 1 0 0 1 1 1 1 Zinc finger, ZZ type N_BRCA1_IG PF16158.5 ORF111472 - 7.5e-06 26.6 0.0 1.5e-05 25.7 0.0 1.5 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene DUF2309 PF10070.9 ORF111472 - 0.049 11.9 0.0 0.067 11.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2309) RTC PF01137.21 ORF107398 - 2.9e-28 98.6 0.0 3.9e-28 98.2 0.0 1.2 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase FHA PF00498.26 NODE_16759_length_1082_cov_351.381089_g12746_i0reverse_frame_3 - 2.2e-18 66.4 0.1 8.4e-09 35.7 0.0 2.6 2 0 0 2 2 2 2 FHA domain Yop-YscD_cpl PF16697.5 NODE_16759_length_1082_cov_351.381089_g12746_i0reverse_frame_3 - 3e-10 40.3 0.0 3e-06 27.4 0.0 3.0 3 0 0 3 3 3 2 Inner membrane component of T3SS, cytoplasmic domain GDP_Man_Dehyd PF16363.5 ORF9978 - 1.1e-48 166.4 0.1 1.2e-48 166.2 0.1 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF9978 - 8.6e-41 140.0 0.1 1e-40 139.7 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF9978 - 8.7e-12 44.6 1.0 7e-11 41.7 1.0 1.9 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 ORF9978 - 3.3e-10 39.6 0.0 2.6e-09 36.6 0.0 2.2 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 ORF9978 - 9.8e-05 21.6 0.0 0.00022 20.4 0.0 1.6 2 0 0 2 2 2 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 ORF9978 - 0.00021 20.5 0.1 0.0037 16.5 0.1 2.6 1 1 0 1 1 1 1 Male sterility protein KR PF08659.10 ORF9978 - 0.0003 20.8 0.0 0.00049 20.1 0.0 1.4 1 0 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF9978 - 0.023 15.0 0.0 0.044 14.1 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Peptidase_C48 PF02902.19 ORF93350 - 0.0027 17.6 0.0 0.0061 16.4 0.0 1.5 2 0 0 2 2 2 1 Ulp1 protease family, C-terminal catalytic domain Trypsin PF00089.26 ORF88457 - 2.3e-55 187.8 2.8 2.9e-55 187.5 2.8 1.1 1 0 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 ORF88457 - 4.6e-09 37.3 0.1 1.5e-08 35.7 0.2 1.8 2 1 0 2 2 2 1 Trypsin-like peptidase domain CUB PF00431.20 ORF88457 - 0.05 13.9 0.1 0.23 11.8 0.0 2.2 2 1 0 2 2 2 0 CUB domain tRNA-synt_2b PF00587.25 ORF88240 - 5.7e-08 32.9 0.0 1.1e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) RTX_C PF08339.10 ORF88240 - 0.051 13.6 0.0 0.078 13.0 0.0 1.2 1 0 0 1 1 1 0 RTX C-terminal domain Thioredoxin_3 PF13192.6 ORF88240 - 0.13 12.3 0.1 1.2 9.2 0.2 2.3 2 0 0 2 2 2 0 Thioredoxin domain U-box PF04564.15 ORF87310 - 6.3e-15 55.1 0.0 1.6e-14 53.8 0.0 1.7 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF87310 - 0.011 15.8 0.0 0.043 14.0 0.0 1.9 1 0 0 1 1 1 0 Zinc-finger of nitric oxide synthase-interacting protein GAS PF13851.6 ORF87310 - 0.91 8.8 23.2 0.021 14.2 11.0 2.5 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding PseudoU_synth_1 PF01416.20 ORF85164 - 7e-13 49.0 0.0 1.7e-12 47.7 0.0 1.7 1 0 0 1 1 1 1 tRNA pseudouridine synthase PPR_2 PF13041.6 ORF84529 - 4.4e-63 209.3 0.1 5.6e-12 45.7 0.0 8.2 2 2 6 8 8 8 7 PPR repeat family PPR PF01535.20 ORF84529 - 2.8e-46 152.5 5.5 2.8e-06 27.2 0.0 9.1 9 0 0 9 9 9 6 PPR repeat PPR_3 PF13812.6 ORF84529 - 3.1e-44 148.9 0.0 4.7e-11 42.6 0.0 5.4 3 2 1 5 5 5 5 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF84529 - 4e-39 132.0 1.6 6.9e-07 28.9 0.0 9.8 11 0 0 11 11 11 6 PPR repeat PPR_long PF17177.4 ORF84529 - 1.2e-19 70.5 0.0 4.4e-09 36.0 0.1 3.2 1 1 2 3 3 3 3 Pentacotripeptide-repeat region of PRORP COX5A PF02284.16 ORF84529 - 3.5e-05 23.7 0.1 0.0016 18.4 0.0 3.0 2 1 0 3 3 3 1 Cytochrome c oxidase subunit Va Clathrin PF00637.20 ORF84529 - 0.00027 20.8 0.0 0.035 14.0 0.0 3.7 2 1 2 5 5 5 1 Region in Clathrin and VPS ANAPC3 PF12895.7 ORF84529 - 0.00089 19.4 1.0 0.13 12.5 0.0 4.0 3 1 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 Vps23_core PF09454.10 ORF84529 - 0.002 18.0 0.0 0.06 13.3 0.0 3.0 2 2 0 2 2 2 1 Vps23 core domain DUF928 PF06051.12 ORF84529 - 0.019 14.8 0.6 40 4.0 0.0 3.5 3 1 0 3 3 3 0 Domain of Unknown Function (DUF928) TPR_7 PF13176.6 ORF84529 - 0.029 14.4 2.7 75 3.7 0.0 5.3 5 0 0 5 5 5 0 Tetratricopeptide repeat RPM2 PF08579.11 ORF84529 - 0.042 14.2 0.0 2.3 8.6 0.0 3.0 2 1 0 2 2 2 0 Mitochondrial ribonuclease P subunit (RPM2) FdhE PF04216.12 ORF84529 - 0.071 13.0 0.3 3 7.7 0.0 2.4 1 1 1 2 2 2 0 Protein involved in formate dehydrogenase formation Glyco_trans_4_3 PF12000.8 ORF84529 - 0.08 12.6 0.1 1.4e+02 2.1 0.0 4.5 1 1 5 7 7 7 0 Glycosyl transferase family 4 group GTP_cyclohydro2 PF00925.20 ORF84529 - 0.12 12.0 0.0 0.37 10.4 0.0 1.8 1 0 0 1 1 1 0 GTP cyclohydrolase II TPR_4 PF07721.14 ORF84529 - 1.2 10.0 14.6 43 5.1 0.0 5.9 6 1 1 7 7 6 0 Tetratricopeptide repeat Mltc_N PF11873.8 ORF82406 - 4.5e-70 234.6 0.0 6.8e-70 234.0 0.0 1.3 1 0 0 1 1 1 1 Membrane-bound lytic murein transglycosylase C, N-terminal domain SLT PF01464.20 ORF82406 - 9.2e-33 112.4 0.0 1.4e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain Lysozyme_like PF13702.6 ORF82406 - 0.0011 18.7 0.1 0.062 13.0 0.1 2.3 1 1 0 1 1 1 1 Lysozyme-like SLT_2 PF13406.6 ORF82406 - 0.0022 17.3 0.0 0.004 16.4 0.0 1.4 1 0 0 1 1 1 1 Transglycosylase SLT domain PsaL PF02605.15 ORF82230 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI RINGv PF12906.7 ORF81440 - 0.0068 16.5 0.7 0.014 15.5 0.7 1.6 1 0 0 1 1 1 1 RING-variant domain TMEM223 PF14640.6 ORF81440 - 0.18 12.0 0.1 0.33 11.1 0.1 1.4 1 0 0 1 1 1 0 Transmembrane protein 223 zf-RING_2 PF13639.6 ORF81440 - 0.88 9.9 7.4 15 6.0 0.2 2.7 2 0 0 2 2 2 0 Ring finger domain PARP PF00644.20 ORF7706 - 2.5e-31 108.8 10.1 1.8e-21 76.7 1.6 4.5 2 2 0 2 2 2 2 Poly(ADP-ribose) polymerase catalytic domain DUF3990 PF13151.6 ORF7706 - 0.036 13.8 0.3 9.1 5.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3990) Tox-ART-HYD1 PF15633.6 ORF7706 - 0.047 14.4 0.0 0.13 13.0 0.0 1.7 1 0 0 1 1 1 0 HYD1 signature containing ADP-ribosyltransferase Trypsin PF00089.26 ORF76977 - 2.3e-55 187.8 2.8 2.9e-55 187.5 2.8 1.1 1 0 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 ORF76977 - 4.6e-09 37.3 0.1 1.5e-08 35.7 0.2 1.8 2 1 0 2 2 2 1 Trypsin-like peptidase domain CUB PF00431.20 ORF76977 - 0.05 13.9 0.1 0.23 11.8 0.0 2.2 2 1 0 2 2 2 0 CUB domain zf-B_box PF00643.24 ORF67944 - 0.11 12.7 0.3 0.23 11.6 0.3 1.5 1 0 0 1 1 1 0 B-box zinc finger FANC_SAP PF18081.1 ORF67944 - 0.11 12.6 0.9 0.31 11.2 0.9 1.7 1 0 0 1 1 1 0 Fanconi anemia-associated nuclease SAP domain DUF1515 PF07439.11 ORF67944 - 0.95 9.5 4.5 0.96 9.5 2.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) FAD_binding_3 PF01494.19 ORF61916 - 8.5e-10 38.4 0.0 1.2e-05 24.7 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 ORF61916 - 4.5e-06 26.5 0.0 0.0066 16.1 0.0 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF61916 - 2.7e-05 23.4 0.6 0.14 11.2 0.0 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein Pyr_redox_2 PF07992.14 ORF61916 - 0.00094 18.5 0.0 0.0016 17.7 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 ORF61916 - 0.077 12.4 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 ORF61916 - 0.12 12.6 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Thi4 PF01946.17 ORF61916 - 0.21 10.8 0.0 0.3 10.3 0.0 1.2 1 0 0 1 1 1 0 Thi4 family Mlf1IP PF10248.9 ORF61776 - 3.7e-05 23.8 25.3 4.2e-05 23.6 23.4 2.0 1 1 1 2 2 2 1 Myelodysplasia-myeloid leukemia factor 1-interacting protein SBBP PF06739.11 ORF58952 - 4.9e-18 64.9 11.8 0.0007 19.5 0.1 6.9 7 0 0 7 7 7 5 Beta-propeller repeat DUF5122 PF17164.4 ORF58952 - 0.0014 18.9 22.2 0.78 10.1 0.4 6.6 6 1 0 6 6 6 3 Domain of unknown function (DUF5122) beta-propeller PAS_3 PF08447.12 ORF58952 - 0.015 15.6 10.6 5.8 7.3 0.0 5.3 6 0 0 6 6 6 0 PAS fold DUF746 PF05344.11 ORF58952 - 0.043 13.6 0.9 13 5.7 0.1 3.6 4 0 0 4 4 4 0 Domain of Unknown Function (DUF746) Reg_prop PF07494.11 ORF58952 - 0.11 12.8 6.6 63 4.3 0.0 5.3 6 0 0 6 6 6 0 Two component regulator propeller ADPRTs_Tse2 PF18648.1 ORF58952 - 0.19 11.7 0.5 31 4.6 0.0 3.5 2 1 2 4 4 4 0 Tse2 ADP-ribosyltransferase toxins TAP_C PF03943.13 ORF58952 - 0.26 11.0 1.4 16 5.2 0.0 3.2 3 0 0 3 3 3 0 TAP C-terminal domain Sel1 PF08238.12 ORF58035 - 1.3e-47 159.1 37.8 2.3e-07 31.3 0.2 10.2 10 0 0 10 10 10 8 Sel1 repeat TPR_7 PF13176.6 ORF58035 - 8.2e-07 28.6 16.5 0.19 11.9 0.1 7.4 7 1 1 8 8 8 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF58035 - 1.1e-05 25.7 25.1 3.2 8.6 0.1 8.7 9 1 0 9 9 9 2 Tetratricopeptide repeat PPR PF01535.20 ORF58035 - 3.1e-05 23.9 10.9 5.7 7.4 0.0 8.1 9 0 0 9 9 9 1 PPR repeat TPR_16 PF13432.6 ORF58035 - 0.0001 22.9 25.5 0.067 13.8 0.8 6.0 2 2 5 7 7 7 4 Tetratricopeptide repeat TPR_3 PF07720.12 ORF58035 - 0.00024 21.0 14.2 2 8.5 0.2 5.9 6 0 0 6 6 6 1 Tetratricopeptide repeat Ntox27 PF15531.6 ORF58035 - 0.0063 16.4 0.2 1.1 9.2 0.0 3.4 1 1 2 3 3 3 1 Bacterial toxin 27 VIT PF08487.10 ORF58035 - 0.012 15.9 5.5 10 6.4 0.1 5.0 4 2 2 6 6 6 0 Vault protein inter-alpha-trypsin domain ComR_TPR PF18710.1 ORF58035 - 0.041 13.4 1.7 20 4.7 0.0 4.5 4 1 2 6 6 6 0 ComR tetratricopeptide GUN4_N PF16416.5 ORF58035 - 0.085 12.9 0.0 6.6 6.8 0.0 3.4 3 1 1 4 4 4 0 ARM-like repeat domain, GUN4-N terminal TPR_14 PF13428.6 ORF58035 - 0.11 13.3 15.4 10 7.2 0.2 6.8 5 2 3 8 8 7 0 Tetratricopeptide repeat MIT PF04212.18 ORF58035 - 0.11 12.5 10.2 25 5.0 0.1 5.8 6 1 0 6 6 6 0 MIT (microtubule interacting and transport) domain ASXH PF13919.6 ORF58035 - 0.14 12.2 0.1 0.24 11.4 0.1 1.3 1 0 0 1 1 1 0 Asx homology domain TPR_2 PF07719.17 ORF58035 - 0.19 11.9 29.1 16 5.9 0.1 8.8 8 1 0 8 8 8 0 Tetratricopeptide repeat AAA_12 PF13087.6 ORF55817 - 1.6e-43 148.7 0.0 2.2e-43 148.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF55817 - 5.1e-07 29.7 0.9 7.8e-07 29.1 0.1 1.7 2 0 0 2 2 2 1 AAA domain UvrD_C_2 PF13538.6 ORF55817 - 2.3e-05 24.1 0.1 7.3e-05 22.5 0.1 1.9 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C PF13361.6 ORF55817 - 0.00065 19.2 0.0 0.39 10.1 0.0 2.4 1 1 1 2 2 2 2 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 ORF55817 - 0.00067 19.5 0.1 0.066 12.9 0.0 2.3 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 ORF55817 - 0.007 16.1 0.1 0.019 14.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain Secretin_N PF03958.17 ORF55817 - 0.014 15.8 0.4 0.045 14.2 0.4 1.8 1 0 0 1 1 1 0 Bacterial type II/III secretion system short domain DUF2075 PF09848.9 ORF55817 - 0.21 10.8 0.1 12 5.0 0.0 2.5 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2075) Cupin_8 PF13621.6 ORF51352 - 6.1e-09 36.0 0.0 1e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Cupin-like domain Cupin_2 PF07883.11 ORF51352 - 0.062 13.0 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 Cupin domain Imm51 PF15595.6 ORF51352 - 0.17 11.8 0.1 1.9 8.4 0.1 2.4 2 0 0 2 2 2 0 Immunity protein 51 DUF641 PF04859.12 ORF5000 - 0.13 12.6 5.7 0.17 12.3 0.1 2.9 3 0 0 3 3 3 0 Plant protein of unknown function (DUF641) Vps53_N PF04100.12 ORF5000 - 0.27 10.2 0.9 2.7 6.9 0.3 2.0 2 0 0 2 2 2 0 Vps53-like, N-terminal SBBP PF06739.11 ORF49635 - 4.9e-18 64.9 11.8 0.0007 19.5 0.1 6.9 7 0 0 7 7 7 5 Beta-propeller repeat DUF5122 PF17164.4 ORF49635 - 0.0014 18.9 22.2 0.78 10.1 0.4 6.6 6 1 0 6 6 6 3 Domain of unknown function (DUF5122) beta-propeller PAS_3 PF08447.12 ORF49635 - 0.015 15.6 10.6 5.8 7.3 0.0 5.3 6 0 0 6 6 6 0 PAS fold DUF746 PF05344.11 ORF49635 - 0.043 13.6 0.9 13 5.7 0.1 3.6 4 0 0 4 4 4 0 Domain of Unknown Function (DUF746) Reg_prop PF07494.11 ORF49635 - 0.11 12.8 6.6 63 4.3 0.0 5.3 6 0 0 6 6 6 0 Two component regulator propeller ADPRTs_Tse2 PF18648.1 ORF49635 - 0.19 11.7 0.5 31 4.6 0.0 3.5 2 1 2 4 4 4 0 Tse2 ADP-ribosyltransferase toxins TAP_C PF03943.13 ORF49635 - 0.26 11.0 1.4 16 5.2 0.0 3.2 3 0 0 3 3 3 0 TAP C-terminal domain PGAP1 PF07819.13 ORF45430 - 1.2e-07 31.8 0.0 1.8e-07 31.1 0.0 1.3 1 1 0 1 1 1 1 PGAP1-like protein Abhydrolase_6 PF12697.7 ORF45430 - 1.8e-07 32.0 2.2 2.6e-07 31.5 2.2 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family LCAT PF02450.15 ORF45430 - 3.2e-07 29.9 0.0 4.6e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase Palm_thioest PF02089.15 ORF45430 - 0.0001 22.2 0.0 0.00013 21.9 0.0 1.2 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Hydrolase_4 PF12146.8 ORF45430 - 0.00042 19.6 0.0 0.00061 19.1 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF45430 - 0.0011 18.7 0.0 0.0019 17.9 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF3089 PF11288.8 ORF45430 - 0.022 14.3 0.0 0.036 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) DUF915 PF06028.11 ORF45430 - 0.11 11.9 0.0 0.18 11.1 0.0 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) LIDHydrolase PF10230.9 ORF45430 - 0.13 11.8 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase DUF268 PF03269.14 ORF43080 - 0.034 14.0 1.5 0.42 10.4 0.1 2.5 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF268 DUF4349 PF14257.6 ORF43080 - 0.065 12.7 2.2 0.12 11.8 2.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) ERM PF00769.19 ORF43080 - 2.3 8.0 29.8 14 5.4 29.8 2.1 1 1 0 1 1 1 0 Ezrin/radixin/moesin family Abhydrolase_3 PF07859.13 ORF42291 - 4.6e-28 98.5 0.0 6e-28 98.2 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF42291 - 0.048 14.3 0.3 0.068 13.8 0.0 1.5 2 0 0 2 2 2 0 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF42291 - 0.062 12.9 0.1 0.18 11.5 0.1 1.6 2 0 0 2 2 2 0 alpha/beta hydrolase fold PsaL PF02605.15 ORF4050 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI PsaL PF02605.15 ORF40167 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI Glycos_transf_4 PF00953.21 ORF33754 - 8.8e-34 116.8 16.2 8.8e-34 116.8 16.2 2.3 3 0 0 3 3 3 1 Glycosyl transferase family 4 MraY_sig1 PF10555.9 ORF33754 - 1e-05 24.8 3.3 1e-05 24.8 3.3 2.7 2 0 0 2 2 2 1 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Ndc1_Nup PF09531.10 ORF33754 - 0.0023 16.7 0.3 0.0023 16.7 0.3 1.7 3 0 0 3 3 3 1 Nucleoporin protein Ndc1-Nup Actin PF00022.19 ORF33184 - 1.9e-139 464.8 0.0 6.2e-139 463.1 0.0 1.7 1 1 0 1 1 1 1 Actin MFS_1 PF07690.16 ORF32318 - 2.5e-06 26.7 7.2 3.1e-06 26.3 7.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily PsaL PF02605.15 ORF24638 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI DUF5631 PF18645.1 ORF23740 - 0.081 13.3 0.9 0.29 11.6 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5631) KH_8 PF17903.1 ORF18317 - 2.1e-27 95.0 0.0 2.1e-27 95.0 0.0 2.3 3 0 0 3 3 3 1 Krr1 KH1 domain KH_1 PF00013.29 ORF18317 - 0.046 13.6 0.0 0.12 12.2 0.0 1.8 1 0 0 1 1 1 0 KH domain UPF0242 PF06785.11 ORF18317 - 2.2 8.3 11.5 3.6 7.6 11.5 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus PsaL PF02605.15 ORF14335 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI MFS_1 PF07690.16 ORF11263 - 3.3e-18 65.8 21.1 5.4e-18 65.0 21.1 1.4 1 0 0 1 1 1 1 Major Facilitator Superfamily CPSase_L_D3 PF02787.19 ORF103760 - 0.23 11.8 4.1 2 8.8 0.3 2.4 2 0 0 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PsaL PF02605.15 ORF102640 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI Actin PF00022.19 ORF100073 - 5.1e-134 446.9 0.0 2e-133 444.9 0.0 1.7 1 1 0 1 1 1 1 Actin C1_2 PF03107.16 NODE_16980_length_1075_cov_150.666346_g12922_i0reverse_frame_1 - 0.02 15.2 5.6 0.02 15.2 5.6 2.5 2 0 0 2 2 2 0 C1 domain zf-B_box PF00643.24 NODE_16980_length_1075_cov_150.666346_g12922_i0reverse_frame_1 - 7.9 6.7 12.5 3.3 7.9 3.7 2.6 2 0 0 2 2 2 0 B-box zinc finger PolyA_pol PF01743.20 NODE_16874_length_1079_cov_3.573755_g12834_i0forward_frame_2 - 1.5e-40 138.5 0.5 7.1e-40 136.4 0.1 2.0 2 0 0 2 2 2 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 NODE_16874_length_1079_cov_3.573755_g12834_i0forward_frame_2 - 8.9e-21 73.4 0.0 2.2e-20 72.2 0.0 1.7 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A HGTP_anticodon PF03129.20 NODE_16874_length_1079_cov_3.573755_g12834_i0forward_frame_2 - 0.057 13.6 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Anticodon binding domain Prp18 PF02840.15 NODE_16823_length_1080_cov_282.285167_g12797_i0reverse_frame_2 - 3.3e-20 72.6 0.1 5.5e-20 71.9 0.1 1.4 1 0 0 1 1 1 1 Prp18 domain DnaJ PF00226.31 NODE_16823_length_1080_cov_282.285167_g12797_i0reverse_frame_2 - 2.3e-07 30.8 0.0 7.1e-07 29.3 0.0 1.9 1 0 0 1 1 1 1 DnaJ domain LptF_LptG PF03739.14 ORF98216 - 2.7e-61 207.4 5.0 3.1e-61 207.2 5.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG RNase_H PF00075.24 ORF9662 - 0.02 15.1 0.1 0.042 14.0 0.1 1.7 1 1 0 1 1 1 0 RNase H DUF1280 PF06918.14 ORF9662 - 0.062 12.9 0.7 0.14 11.7 0.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1280) Fez1 PF06818.15 ORF9662 - 0.14 12.6 39.8 2.1 8.8 18.6 3.2 2 1 1 3 3 3 0 Fez1 Peptidase_C1 PF00112.23 ORF95156 - 1.3e-65 221.6 7.0 2e-65 220.9 7.0 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF95156 - 2.9e-14 53.2 4.2 7.5e-14 51.9 4.2 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF95156 - 0.0063 15.3 3.3 0.064 12.0 0.2 2.8 3 0 0 3 3 3 2 Peptidase C1-like family GST_N_2 PF13409.6 ORF91686 - 9.5e-16 57.9 0.0 1.7e-15 57.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF91686 - 1.7e-13 50.3 0.0 3.9e-13 49.2 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF91686 - 1.5e-06 28.3 0.1 2.7e-06 27.5 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF91686 - 0.0012 19.0 0.7 0.0027 17.9 0.3 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain HEPN_Cthe2314 PF18730.1 ORF91686 - 0.0048 17.0 0.0 0.011 15.7 0.0 1.6 1 0 0 1 1 1 1 Cthe_2314-like HEPN GST_N_3 PF13417.6 ORF91686 - 0.005 17.2 0.0 1.2 9.7 0.0 2.3 2 0 0 2 2 2 2 Glutathione S-transferase, N-terminal domain Cytochrom_C1 PF02167.15 ORF89170 - 5.2e-47 160.4 0.1 6.8e-47 160.0 0.1 1.2 1 0 0 1 1 1 1 Cytochrome C1 family Cytochrome_CBB3 PF13442.6 ORF89170 - 0.0015 18.8 0.6 0.0038 17.5 0.1 2.0 2 0 0 2 2 2 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF89170 - 0.0064 17.6 0.2 0.049 14.8 0.0 2.4 2 0 0 2 2 2 1 Cytochrome c Peptidase_C1 PF00112.23 ORF84809 - 1.3e-65 221.6 7.0 2e-65 220.9 7.0 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF84809 - 2.9e-14 53.2 4.2 7.5e-14 51.9 4.2 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF84809 - 0.0063 15.3 3.3 0.064 12.0 0.2 2.8 3 0 0 3 3 3 2 Peptidase C1-like family Metallophos PF00149.28 ORF84042 - 4.3e-09 37.2 0.0 7.3e-09 36.4 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF84042 - 0.00013 22.3 0.0 0.004 17.4 0.0 2.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 ORF84042 - 0.25 10.7 0.0 0.39 10.0 0.0 1.3 1 0 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily Glyco_tranf_2_3 PF13641.6 ORF83917 - 1.8e-08 34.6 0.0 2.5e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 ORF83917 - 2.7e-05 23.8 0.0 3.6e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 ORF83917 - 8.4e-05 22.4 0.0 0.00019 21.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 ORF83917 - 0.0032 17.4 0.0 0.0051 16.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Ala_racemase_N PF01168.20 ORF75331 - 1.5e-70 237.2 0.0 2e-70 236.9 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Ala_racemase_C PF00842.21 ORF75331 - 5.8e-40 136.0 0.1 8.6e-40 135.4 0.1 1.3 1 0 0 1 1 1 1 Alanine racemase, C-terminal domain GFO_IDH_MocA PF01408.22 ORF75025 - 1.1e-12 48.8 0.0 2.9e-12 47.5 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold COPI_C PF06957.11 ORF75025 - 0.058 12.2 0.0 0.098 11.4 0.0 1.3 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus SpoIIIAH PF12685.7 ORF72930 - 8e-05 22.6 0.0 0.00024 21.0 0.0 1.8 2 0 0 2 2 2 1 SpoIIIAH-like protein Oxidored_q3 PF00499.20 ORF72930 - 0.00014 21.6 5.6 0.056 13.2 5.6 2.7 1 1 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Gaa1 PF04114.14 ORF72930 - 0.00023 20.3 0.4 0.23 10.4 0.0 2.3 2 0 0 2 2 2 2 Gaa1-like, GPI transamidase component DUF4834 PF16118.5 ORF72930 - 0.00063 20.7 15.0 0.0011 19.9 0.0 4.0 4 1 1 5 5 3 1 Domain of unknown function (DUF4834) SIT PF15330.6 ORF72930 - 0.002 18.6 0.6 0.025 15.0 0.1 2.6 2 0 0 2 2 2 1 SHP2-interacting transmembrane adaptor protein, SIT Tim54 PF11711.8 ORF72930 - 0.003 16.4 0.0 0.0044 15.9 0.0 1.3 1 0 0 1 1 1 1 Inner membrane protein import complex subunit Tim54 PBP1_TM PF14812.6 ORF72930 - 0.0032 17.8 4.0 0.036 14.4 3.9 2.6 2 0 0 2 2 2 1 Transmembrane domain of transglycosylase PBP1 at N-terminal CENP-B_dimeris PF09026.10 ORF72930 - 0.0042 17.5 3.0 0.0042 17.5 3.0 2.6 2 0 0 2 2 2 1 Centromere protein B dimerisation domain Comm PF15957.5 ORF72930 - 0.0046 17.3 2.1 0.45 10.9 0.1 3.2 3 0 0 3 3 3 1 Commissureless Zip PF02535.22 ORF72930 - 0.013 14.8 0.1 0.028 13.6 0.1 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter Connexin PF00029.19 ORF72930 - 0.038 13.7 0.6 0.038 13.7 0.6 2.8 1 1 1 2 2 2 0 Connexin Afi1 PF07792.12 ORF72930 - 0.04 14.4 4.5 0.13 12.8 4.5 1.9 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking DUF2207 PF09972.9 ORF72930 - 0.077 11.7 0.0 0.077 11.7 0.0 2.6 1 1 0 2 2 1 0 Predicted membrane protein (DUF2207) TRAP_alpha PF03896.16 ORF72930 - 0.12 11.6 6.1 0.89 8.7 3.3 2.7 3 0 0 3 3 3 0 Translocon-associated protein (TRAP), alpha subunit ETRAMP PF09716.10 ORF72930 - 0.17 11.9 0.9 1.7 8.8 0.2 3.1 3 1 0 3 3 3 0 Malarial early transcribed membrane protein (ETRAMP) DUF2970 PF11174.8 ORF72930 - 0.21 11.5 0.0 0.21 11.5 0.0 3.2 4 0 0 4 4 2 0 Protein of unknown function (DUF2970) Adipogenin PF15202.6 ORF72930 - 0.22 11.6 0.0 0.22 11.6 0.0 2.8 3 1 0 3 3 2 0 Adipogenin DUF3810 PF12725.7 ORF72930 - 0.26 10.6 10.1 2.6 7.3 0.0 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF3810) TMEM51 PF15345.6 ORF72930 - 0.66 9.8 2.4 4.4 7.1 2.4 2.2 1 1 0 1 1 1 0 Transmembrane protein 51 EphA2_TM PF14575.6 ORF72930 - 0.72 10.8 10.3 2 9.4 0.3 4.4 2 2 1 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain Pex24p PF06398.11 ORF72930 - 0.88 8.5 5.9 8.6 5.2 5.9 2.3 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin Peptidase_S49_N PF08496.10 ORF72930 - 0.92 9.6 0.0 0.92 9.6 0.0 2.7 3 1 1 4 4 2 0 Peptidase family S49 N-terminal PPP4R2 PF09184.11 ORF72930 - 1.9 8.0 13.3 0.3 10.6 8.0 2.0 2 0 0 2 2 2 0 PPP4R2 Tom22 PF04281.13 ORF72930 - 4.6 7.0 6.8 11 5.8 6.8 1.6 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 DNA_pol_phi PF04931.13 ORF72930 - 4.7 5.2 13.2 8.8 4.3 13.2 1.4 1 0 0 1 1 1 0 DNA polymerase phi DHHC PF01529.20 ORF72930 - 5.7 7.0 12.6 0.29 11.3 0.2 3.2 2 1 1 3 3 2 0 DHHC palmitoyltransferase AA_kinase PF00696.28 ORF68239 - 2.6e-28 99.3 0.1 1.4e-27 96.8 0.0 1.9 2 0 0 2 2 2 1 Amino acid kinase family ACT PF01842.25 ORF68239 - 3.6e-05 23.4 1.0 0.22 11.3 0.2 3.1 2 1 1 3 3 3 2 ACT domain Pyrophosphatase PF00719.19 ORF66816 - 1.3e-43 148.5 0.2 2.4e-43 147.7 0.2 1.4 1 0 0 1 1 1 1 Inorganic pyrophosphatase PUF PF00806.19 ORF66112 - 7.5e-15 53.7 0.5 0.0005 19.6 0.0 3.6 3 0 0 3 3 3 3 Pumilio-family RNA binding repeat DUF4974 PF16344.5 ORF66112 - 0.029 14.4 0.2 0.15 12.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4974) Na_Pi_cotrans PF02690.15 ORF65914 - 4.5e-18 65.7 7.4 4.5e-18 65.7 7.4 1.6 2 0 0 2 2 2 1 Na+/Pi-cotransporter PsbM PF05151.12 ORF65914 - 4.8 7.1 8.4 0.67 9.8 2.7 2.5 2 0 0 2 2 2 0 Photosystem II reaction centre M protein (PsbM) Ank_2 PF12796.7 ORF64326 - 5e-51 171.2 0.3 8e-16 58.4 0.0 4.0 2 1 3 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF64326 - 2.3e-39 133.3 1.3 6.8e-10 39.3 0.0 5.5 3 2 2 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF64326 - 6.8e-29 99.0 7.1 3.2e-05 24.2 0.0 7.4 7 0 0 7 7 7 7 Ankyrin repeat Ank_5 PF13857.6 ORF64326 - 4.1e-28 97.1 3.6 2.7e-09 37.1 0.1 6.4 2 2 5 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF64326 - 6.8e-27 90.6 0.0 0.00017 21.7 0.1 7.8 8 0 0 8 8 8 5 Ankyrin repeat ubiquitin PF00240.23 ORF64326 - 0.0016 18.2 0.0 0.0029 17.3 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family T2SS-T3SS_pil_N PF13629.6 ORF64326 - 0.038 13.7 1.5 2.3 8.0 0.0 4.1 5 1 1 6 6 6 0 Pilus formation protein N terminal region DUF4355 PF14265.6 ORF63846 - 0.048 13.9 7.4 0.11 12.8 7.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4355) Stc1 PF12898.7 ORF63846 - 2.7 8.6 12.4 8.5 7.0 12.5 1.8 1 1 0 1 1 1 0 Stc1 domain Peptidase_C1 PF00112.23 ORF61652 - 1.3e-65 221.6 7.0 2e-65 220.9 7.0 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF61652 - 2.9e-14 53.2 4.2 7.5e-14 51.9 4.2 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF61652 - 0.0063 15.3 3.3 0.064 12.0 0.2 2.8 3 0 0 3 3 3 2 Peptidase C1-like family RNA_pol_3_Rpc31 PF11705.8 ORF52614 - 0.019 15.2 19.4 0.035 14.4 19.4 1.5 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 RNA_pol_3_Rpc31 PF11705.8 ORF25276 - 0.019 15.2 19.4 0.035 14.4 19.4 1.5 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 Colicin_V PF02674.16 ORF25119 - 4.5 7.2 10.1 0.11 12.5 0.5 2.8 3 1 1 4 4 4 0 Colicin V production protein Peptidase_C1 PF00112.23 ORF21308 - 1.3e-65 221.6 7.0 2e-65 220.9 7.0 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF21308 - 2.9e-14 53.2 4.2 7.5e-14 51.9 4.2 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF21308 - 0.0063 15.3 3.3 0.064 12.0 0.2 2.8 3 0 0 3 3 3 2 Peptidase C1-like family MORN PF02493.20 ORF1970 - 1.3e-17 62.5 37.2 0.00065 19.4 0.0 9.2 9 0 0 9 9 9 6 MORN repeat Ribosomal_S6 PF01250.17 ORF1970 - 1.1 9.6 4.7 0.89 9.9 0.1 2.7 3 0 0 3 3 3 0 Ribosomal protein S6 Nuc_sug_transp PF04142.15 ORF18969 - 4.9e-10 39.1 0.5 9.2e-10 38.2 0.4 1.5 1 1 0 1 1 1 1 Nucleotide-sugar transporter PUNUT PF16913.5 ORF18969 - 1.5e-07 31.0 0.3 3.1e-07 29.9 0.3 1.5 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport CRT-like PF08627.10 ORF18969 - 1.8e-07 30.5 3.0 2.5e-07 29.9 3.0 1.2 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like SLC35F PF06027.12 ORF18969 - 3.8e-07 29.9 3.2 6.2e-07 29.2 3.2 1.3 1 0 0 1 1 1 1 Solute carrier family 35 EamA PF00892.20 ORF18969 - 4.6e-06 26.8 6.9 4.6e-06 26.8 6.9 2.5 2 2 0 2 2 2 1 EamA-like transporter family TPT PF03151.16 ORF18969 - 0.0016 17.9 3.0 0.0016 17.9 3.0 1.8 1 1 0 2 2 2 1 Triose-phosphate Transporter family UAA PF08449.11 ORF18969 - 0.0026 17.0 2.8 0.0041 16.4 2.8 1.2 1 0 0 1 1 1 1 UAA transporter family Cytochrom_B_C PF00032.17 ORF18969 - 0.32 11.3 4.1 0.24 11.7 1.4 2.3 2 1 0 2 2 2 0 Cytochrome b(C-terminal)/b6/petD Branch PF02485.21 ORF1626 - 0.028 13.9 0.3 0.057 12.9 0.3 1.5 1 0 0 1 1 1 0 Core-2/I-Branching enzyme YojJ PF10372.9 ORF1626 - 2.6 8.2 7.5 0.58 10.3 2.3 2.7 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks35.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks35.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks35.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks35.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:02:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RuvA_C PF07499.13 ORF50719 - 0.16 12.4 1.0 0.31 11.5 1.0 1.5 1 0 0 1 1 1 0 RuvA, C-terminal domain UPAR_LY6 PF00021.21 ORF50176 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF50176 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain Acyltransferase PF01553.21 ORF49890 - 5.8e-06 26.0 0.1 7.1e-06 25.7 0.1 1.2 1 1 0 1 1 1 1 Acyltransferase DUF2262 PF10020.9 ORF49278 - 0.065 13.6 3.2 0.067 13.6 3.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) NODP PF07684.12 ORF49271 - 0.013 15.6 0.1 0.017 15.2 0.1 1.2 1 0 0 1 1 1 0 NOTCH protein Tudor_1_RapA PF18339.1 ORF49271 - 0.21 11.5 0.9 2.4 8.2 0.1 2.2 1 1 1 2 2 2 0 RapA N-terminal Tudor like domain 1 T3SS_NleG PF06416.12 ORF49101 - 0.13 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Effector protein NleG DUF776 PF05604.11 ORF48920 - 0.0093 16.4 2.1 0.0099 16.3 2.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF776) DUF4293 PF14126.6 ORF48551 - 0.001 19.3 0.2 0.0011 19.3 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4293) E1-E2_ATPase PF00122.20 ORF48551 - 0.0036 16.8 0.6 0.0042 16.6 0.6 1.1 1 0 0 1 1 1 1 E1-E2 ATPase Wzy_C PF04932.15 ORF48551 - 0.0089 15.7 0.8 0.01 15.5 0.8 1.0 1 0 0 1 1 1 1 O-Antigen ligase DUF4131 PF13567.6 ORF48551 - 0.012 15.3 0.2 0.014 15.1 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Wzy_C_2 PF11846.8 ORF48551 - 0.013 15.4 0.8 0.015 15.2 0.8 1.0 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal 7TM-7TMR_HD PF07698.11 ORF48551 - 0.028 14.2 0.1 0.032 14.0 0.1 1.0 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase Exosortase_EpsH PF09721.10 ORF48551 - 0.03 13.8 0.5 0.033 13.7 0.5 1.0 1 0 0 1 1 1 0 Transmembrane exosortase (Exosortase_EpsH) NVEALA PF14055.6 ORF48551 - 0.038 14.0 0.3 0.16 11.9 0.0 1.8 2 0 0 2 2 2 0 NVEALA protein FeoB_associated PF12669.7 ORF48551 - 0.11 12.9 3.0 3.8 8.0 0.1 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein DUF3619 PF12279.8 ORF48551 - 0.14 12.5 1.3 3.1 8.1 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3619) CcmD PF04995.14 ORF48551 - 0.38 10.9 4.2 0.86 9.7 0.7 2.1 2 0 0 2 2 2 0 Heme exporter protein D (CcmD) DUF4225 PF13988.6 ORF48125 - 0.057 13.0 0.3 0.066 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4225) FliT PF05400.13 ORF47989 - 0.0029 18.4 2.7 0.0031 18.3 2.7 1.0 1 0 0 1 1 1 1 Flagellar protein FliT HK_sensor PF16750.5 ORF47937 - 0.0042 17.4 0.0 0.0051 17.1 0.0 1.1 1 0 0 1 1 1 1 Sensor domain of 2-component histidine kinase HOK_GEF PF01848.16 ORF4773 - 2.4e-21 74.8 5.7 2.9e-21 74.6 5.7 1.1 1 0 0 1 1 1 1 Hok/gef family DUF4231 PF14015.6 ORF4773 - 0.091 13.2 0.1 0.1 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) DUF4497 PF14924.6 ORF47370 - 0.085 13.3 0.1 0.093 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4497) PMAIP1 PF15150.6 ORF46734 - 6.7 6.7 6.6 7.5 6.5 1.0 2.3 1 1 1 2 2 2 0 Phorbol-12-myristate-13-acetate-induced Glyco_hydro_108 PF05838.12 ORF4671 - 0.039 14.4 0.2 0.041 14.4 0.2 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase 108 PalH PF08733.10 ORF4572 - 0.0093 15.0 5.1 0.0095 15.0 5.1 1.0 1 0 0 1 1 1 1 PalH/RIM21 Spore_YabQ PF09578.10 ORF4572 - 0.069 13.4 4.0 0.087 13.0 4.0 1.2 1 0 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) Yae1_N PF09811.9 ORF45386 - 0.0021 17.7 11.1 0.064 13.0 1.3 2.8 2 1 1 3 3 3 2 Essential protein Yae1, N terminal VPS28 PF03997.12 ORF45373 - 0.13 11.9 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 VPS28 protein DUF884 PF05959.11 ORF44907 - 0.19 11.4 0.3 0.2 11.3 0.3 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF884) HA2 PF04408.23 ORF44486 - 0.066 13.5 0.0 0.082 13.2 0.0 1.1 1 0 0 1 1 1 0 Helicase associated domain (HA2) LpoB PF13036.6 ORF44171 - 7.6e-16 58.4 0.0 8.3e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 Peptidoglycan-synthase activator LpoB Elong_Iki1 PF10483.9 ORF4402 - 0.056 12.9 0.0 0.059 12.9 0.0 1.0 1 0 0 1 1 1 0 Elongator subunit Iki1 LysR_substrate PF03466.20 ORF43390 - 2.3e-08 33.7 0.0 2.4e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain FAP PF07174.11 ORF4327 - 1.5 8.2 11.5 1.6 8.1 11.5 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) oligo_HPY PF08352.12 ORF43204 - 0.014 15.9 0.1 0.017 15.7 0.1 1.3 1 1 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region Cornichon PF03311.14 ORF42648 - 0.0072 16.7 0.2 0.0081 16.5 0.2 1.1 1 0 0 1 1 1 1 Cornichon protein NAD_kinase PF01513.21 ORF41687 - 8.2e-23 81.0 1.7 9e-23 80.9 1.7 1.0 1 0 0 1 1 1 1 ATP-NAD kinase Phlebovirus_G1 PF07243.11 ORF41657 - 0.12 10.8 1.1 0.12 10.7 1.1 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 DUF4560 PF15118.6 ORF40484 - 0.19 11.6 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4560) DUF3931 PF13082.6 ORF40445 - 0.13 12.5 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3931) FERM_M PF00373.18 ORF40399 - 0.045 14.2 0.3 0.047 14.1 0.3 1.2 1 0 0 1 1 1 0 FERM central domain RNA_pol_Rpc4 PF05132.14 ORF40110 - 0.048 14.1 0.7 0.048 14.1 0.7 1.7 1 1 1 2 2 2 0 RNA polymerase III RPC4 COX2_TM PF02790.15 ORF40002 - 0.075 13.2 0.1 0.081 13.1 0.1 1.0 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain BIV_Env PF05858.12 ORF39100 - 0.1 10.8 1.5 0.11 10.6 1.5 1.0 1 0 0 1 1 1 0 Bovine immunodeficiency virus surface protein (SU) SMAP PF15477.6 ORF39060 - 0.13 13.3 0.0 0.15 13.0 0.0 1.2 1 0 0 1 1 1 0 Small acidic protein family Peptidase_C54 PF03416.19 ORF38356 - 1.8e-19 70.2 0.0 1.9e-19 70.1 0.0 1.0 1 0 0 1 1 1 1 Peptidase family C54 DUF5422 PF17459.2 ORF38081 - 0.14 12.4 0.1 0.17 12.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5422) Lum_binding PF00677.17 ORF37932 - 0.11 12.5 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Lumazine binding domain CsbD PF05532.12 ORF37894 - 7.6e-22 77.0 8.4 8.8e-22 76.8 8.4 1.1 1 0 0 1 1 1 1 CsbD-like IBP39 PF11422.8 ORF37894 - 0.11 12.2 0.0 0.13 12.1 0.0 1.0 1 0 0 1 1 1 0 Initiator binding protein 39 kDa DUF2142 PF09913.9 ORF37798 - 0.036 12.9 1.9 0.041 12.7 1.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) DUF2533 PF10752.9 ORF37674 - 0.032 14.7 0.0 0.038 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) DUF5134 PF17197.4 ORF37156 - 0.062 13.2 0.7 0.063 13.2 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5134) Aldolase_II PF00596.21 ORF37046 - 6.7e-08 32.7 0.1 9.9e-08 32.1 0.1 1.3 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Sorb PF02208.16 ORF36646 - 0.12 12.2 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Sorbin homologous domain Pribosyltran PF00156.27 ORF36178 - 2.9e-07 30.1 0.0 2.9e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF36178 - 0.00032 20.2 0.0 0.00032 20.2 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 ORF36178 - 0.0032 17.0 0.0 0.0035 16.9 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase DUF3042 PF11240.8 ORF35023 - 0.019 15.0 0.2 0.82 9.7 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3042) Flagellin_C PF00700.21 ORF34120 - 0.063 13.6 0.1 0.075 13.4 0.1 1.1 1 0 0 1 1 1 0 Bacterial flagellin C-terminal helical region LCE PF14672.6 ORF33965 - 5 7.8 11.5 8.8 7.0 11.5 1.4 1 1 0 1 1 1 0 Late cornified envelope TPR_1 PF00515.28 ORF33783 - 3.4e-08 33.0 0.3 7.5e-08 31.9 0.3 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF33783 - 8.8e-07 28.6 0.1 2.3e-06 27.3 0.1 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF33783 - 0.0001 22.2 0.2 0.00019 21.4 0.2 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF33783 - 0.00043 20.5 0.0 0.00051 20.3 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF33783 - 0.00047 19.8 0.0 0.0007 19.2 0.0 1.3 1 0 0 1 1 1 1 TPR repeat TPR_16 PF13432.6 ORF33783 - 0.024 15.3 0.0 0.034 14.8 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF33783 - 0.031 14.8 0.0 0.052 14.1 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat MAS20 PF02064.15 ORF33783 - 0.043 13.9 0.0 0.049 13.7 0.0 1.1 1 0 0 1 1 1 0 MAS20 protein import receptor TPR_7 PF13176.6 ORF33783 - 0.084 12.9 0.0 0.74 10.0 0.0 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF5645 PF18713.1 ORF33641 - 0.042 14.1 0.2 0.047 14.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5645) BRX_assoc PF16627.5 ORF32058 - 0.078 13.1 0.1 0.1 12.8 0.1 1.1 1 0 0 1 1 1 0 Unstructured region between BRX_N and BRX domain OAD_gamma PF04277.13 ORF31146 - 0.24 12.0 1.8 0.32 11.6 1.8 1.1 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF1408 PF07193.11 ORF31078 - 0.14 12.3 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1408) RNA_pol_Rpb6 PF01192.22 ORF31063 - 0.1 12.6 0.2 0.16 12.0 0.2 1.3 1 0 0 1 1 1 0 RNA polymerase Rpb6 RNA_pol_Rpc82 PF05645.13 ORF29862 - 0.013 15.2 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 TAFII28 PF04719.14 ORF29862 - 0.087 12.9 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 hTAFII28-like protein conserved region DUF4777 PF16007.5 ORF29288 - 0.01 16.0 0.1 0.015 15.5 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4777) DUF2105 PF09878.9 ORF29257 - 0.052 13.3 0.5 0.053 13.3 0.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2105) 2TM PF13239.6 ORF29224 - 0.077 13.3 0.6 0.094 13.0 0.6 1.2 1 1 0 1 1 1 0 2TM domain Ribosomal_L23 PF00276.20 ORF29224 - 0.15 12.5 0.1 0.18 12.2 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L23 Fcf1 PF04900.12 ORF28648 - 0.024 15.0 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Fcf1 Rab5ip PF07019.12 ORF28357 - 5.5e-07 30.1 4.5 6.4e-07 29.9 4.5 1.1 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) Ntox11 PF15521.6 ORF27890 - 0.11 12.1 0.0 0.12 12.0 0.0 1.0 1 0 0 1 1 1 0 Novel toxin 11 MORN PF02493.20 ORF2754 - 1.9e-06 27.4 18.0 0.00023 20.9 2.6 4.3 4 1 0 4 4 4 3 MORN repeat FXR_C1 PF16096.5 ORF26562 - 0.18 12.0 2.8 0.23 11.7 2.8 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 DUF3975 PF13126.6 ORF25868 - 0.16 12.4 6.1 0.2 12.1 6.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) HTH_35 PF13693.6 ORF25021 - 4.2e-23 81.2 0.1 4.8e-23 81.0 0.1 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding BenE PF03594.13 ORF24781 - 0.07 11.9 1.3 0.076 11.8 1.3 1.0 1 0 0 1 1 1 0 Benzoate membrane transport protein tRNA-synt_2d PF01409.20 ORF24569 - 0.11 12.0 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) Pkinase PF00069.25 ORF23759 - 8.9e-18 64.6 0.8 9.1e-18 64.6 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF23759 - 8e-12 45.0 0.4 8e-12 45.0 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF23759 - 5e-06 26.0 0.5 5.4e-06 25.9 0.5 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF23759 - 0.0014 18.0 0.0 0.0015 17.9 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF23759 - 0.0059 15.6 0.2 0.0059 15.6 0.2 1.1 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF23759 - 0.024 14.6 0.0 0.024 14.6 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF23759 - 0.072 12.0 0.3 0.075 12.0 0.3 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase RIO1 PF01163.22 ORF23759 - 0.079 12.5 0.2 0.082 12.5 0.2 1.0 1 0 0 1 1 1 0 RIO1 family Pkinase_fungal PF17667.1 ORF23759 - 0.14 10.9 0.2 0.13 11.0 0.2 1.1 1 0 0 1 1 1 0 Fungal protein kinase Cyclotide PF03784.13 ORF23324 - 0.015 15.4 1.8 0.015 15.4 1.8 2.0 2 0 0 2 2 2 0 Cyclotide family DUF5004 PF16395.5 ORF23305 - 0.0029 17.6 0.0 0.0034 17.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5004) VARLMGL PF14383.6 ORF2170 - 0.11 12.1 0.3 0.23 11.0 0.3 1.6 1 0 0 1 1 1 0 DUF761-associated sequence motif DUF3839 PF12943.7 ORF2143 - 0.045 13.2 0.0 0.045 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) KH_1 PF00013.29 ORF2117 - 6.9e-07 29.0 0.3 8.2e-07 28.8 0.3 1.1 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF2117 - 0.0012 18.6 0.5 0.0013 18.5 0.5 1.1 1 0 0 1 1 1 1 KH domain Pkinase PF00069.25 ORF20981 - 0.0041 16.5 0.1 0.0053 16.2 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Vif PF00559.17 ORF20851 - 6.8e-05 22.6 0.2 6.8e-05 22.6 0.2 1.1 1 0 0 1 1 1 1 Retroviral Vif (Viral infectivity) protein SARA PF11409.8 ORF2082 - 3.6 7.9 7.8 0.44 10.8 2.9 1.9 2 0 0 2 2 2 0 Smad anchor for receptor activation (SARA) DOMON PF03351.17 ORF20686 - 0.00091 19.4 0.0 0.0013 18.9 0.0 1.2 1 0 0 1 1 1 1 DOMON domain Peptidase_M10 PF00413.24 ORF20569 - 0.079 12.8 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Matrixin LCE PF14672.6 ORF20540 - 5 7.8 11.5 8.8 7.0 11.5 1.4 1 1 0 1 1 1 0 Late cornified envelope RecT PF03837.14 ORF20401 - 0.019 14.4 0.1 0.021 14.3 0.1 1.0 1 0 0 1 1 1 0 RecT family SbmA_BacA PF05992.12 ORF20400 - 0.0093 15.4 0.2 0.0098 15.4 0.2 1.0 1 0 0 1 1 1 1 SbmA/BacA-like family ANAPC1 PF12859.7 ORF20306 - 0.18 12.4 2.9 0.22 12.1 2.9 1.0 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 Peptidase_M99_m PF17130.4 ORF20059 - 0.15 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 beta-barrel domain of carboxypeptidase M99 CheW PF01584.19 ORF19761 - 0.024 14.2 0.0 0.027 14.1 0.0 1.1 1 0 0 1 1 1 0 CheW-like domain PsbX PF06596.11 ORF19761 - 1.1 9.3 3.9 0.68 10.0 0.5 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) UPAR_LY6 PF00021.21 ORF1969 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF1969 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain MORN PF02493.20 ORF19113 - 3.6e-12 45.4 16.4 8.2e-06 25.4 0.1 3.9 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 ORF19113 - 2.7 7.7 6.4 2.7 7.7 0.1 3.1 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain Ribosomal_L7Ae PF01248.26 ORF19063 - 1e-08 34.8 0.0 1.3e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Cortexin PF11057.8 ORF18271 - 0.074 12.9 0.3 0.11 12.4 0.3 1.3 1 0 0 1 1 1 0 Cortexin of kidney DUF1538 PF07556.11 ORF18177 - 0.072 12.4 0.5 0.071 12.4 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1538) HEAT_PBS PF03130.16 ORF18020 - 0.012 16.2 0.0 0.028 15.1 0.0 1.6 2 0 0 2 2 2 0 PBS lyase HEAT-like repeat Ribosomal_L18p PF00861.22 ORF17509 - 0.086 13.2 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Pyridox_oxase_2 PF12766.7 ORF17050 - 0.12 13.0 0.0 0.12 13.0 0.0 1.0 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase Actin PF00022.19 ORF16597 - 1.4e-09 37.1 0.0 1.4e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 Actin ALP_N PF17989.1 ORF16597 - 0.0039 17.4 0.0 0.0046 17.1 0.0 1.0 1 0 0 1 1 1 1 Actin like proteins N terminal domain EF-hand_1 PF00036.32 ORF16554 - 4.2e-17 60.3 0.7 1.4e-07 30.6 0.1 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF16554 - 1.4e-16 60.7 0.1 1.5e-16 60.6 0.1 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF16554 - 7.9e-14 50.3 0.1 1.3e-06 27.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF16554 - 3.7e-13 49.1 1.1 2.4e-06 27.3 0.3 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF16554 - 4.2e-13 48.1 0.8 1.1e-05 24.7 0.1 2.3 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF16554 - 0.00018 21.8 0.1 0.00021 21.6 0.1 1.0 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF16554 - 0.0003 21.0 0.0 0.00037 20.8 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF16554 - 0.0029 17.5 0.1 0.0031 17.4 0.1 1.1 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Lip_prot_lig_C PF10437.9 ORF16554 - 0.027 14.4 0.3 0.14 12.1 0.2 1.8 1 1 1 2 2 2 0 Bacterial lipoate protein ligase C-terminus PMBR PF09373.10 ORF16554 - 0.065 13.4 0.0 20 5.5 0.0 2.7 3 0 0 3 3 3 0 Pseudomurein-binding repeat Trehalase_Ca-bi PF07492.11 ORF16554 - 0.093 12.5 0.5 0.18 11.5 0.5 1.5 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain UPF0154 PF03672.13 ORF16554 - 0.21 11.6 0.0 0.28 11.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) DUF4525 PF15027.6 ORF16065 - 0.24 11.1 0.1 0.26 11.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) Glyco_hydro_108 PF05838.12 ORF15894 - 0.039 14.4 0.2 0.041 14.4 0.2 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase 108 Gal4_dimer PF03902.13 ORF15537 - 0.032 14.4 0.1 0.21 11.8 0.1 1.9 1 1 0 1 1 1 0 Gal4-like dimerisation domain YihI PF04220.12 ORF15527 - 0.057 13.1 0.3 0.057 13.1 0.3 1.2 1 0 0 1 1 1 0 Der GTPase activator (YihI) Titin_Ig-rpts PF06582.12 ORF15527 - 0.11 12.4 0.5 0.19 11.7 0.5 1.4 1 0 0 1 1 1 0 Titin repeat DOMON PF03351.17 ORF15174 - 0.00049 20.3 0.0 0.00077 19.7 0.0 1.3 1 0 0 1 1 1 1 DOMON domain Skp1_POZ PF03931.15 ORF15046 - 2.3e-07 30.9 0.1 5e-07 29.8 0.0 1.5 2 0 0 2 2 2 1 Skp1 family, tetramerisation domain DUF1365 PF07103.11 ORF14923 - 0.12 12.0 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1365) ER_lumen_recept PF00810.18 ORF14227 - 0.0067 17.3 0.5 0.0067 17.3 0.5 1.0 1 0 0 1 1 1 1 ER lumen protein retaining receptor CheW PF01584.19 ORF13953 - 0.024 14.2 0.0 0.027 14.1 0.0 1.1 1 0 0 1 1 1 0 CheW-like domain PsbX PF06596.11 ORF13953 - 1.1 9.3 3.9 0.68 10.0 0.5 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) pP_pnuc_2 PF18166.1 ORF13455 - 0.0082 16.2 0.0 0.01 15.9 0.0 1.2 1 0 0 1 1 1 1 Predicted pPIWI-associating nuclease Nitrate_red_gam PF02665.14 ORF13366 - 2.4e-24 86.1 1.1 2.6e-24 86.0 1.1 1.0 1 0 0 1 1 1 1 Nitrate reductase gamma subunit CHB_HEX_C PF03174.13 ORF1336 - 0.13 12.2 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Chitobiase/beta-hexosaminidase C-terminal domain Ldr_toxin PF13940.6 ORF13178 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system Ank_2 PF12796.7 ORF13166 - 4.9e-05 23.8 0.1 5.9e-05 23.6 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF13166 - 0.00011 22.5 0.1 0.16 12.4 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF13166 - 0.002 18.6 0.1 0.0025 18.3 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF13166 - 0.0028 17.9 0.3 0.25 11.7 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF13166 - 0.011 16.2 0.2 0.2 12.3 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeat Ribosomal_S5_C PF03719.15 ORF13166 - 0.12 11.9 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S5, C-terminal domain Trehalose_recp PF06151.13 ORF12990 - 0.0039 15.9 0.0 0.0043 15.7 0.0 1.0 1 0 0 1 1 1 1 Trehalose receptor zf-C2H2_10 PF16588.5 ORF12967 - 0.035 13.8 1.9 0.086 12.6 1.9 1.7 1 0 0 1 1 1 0 C2H2 zinc-finger ACBP PF00887.19 ORF12283 - 1.1e-15 57.6 0.2 1.2e-15 57.5 0.2 1.0 1 0 0 1 1 1 1 Acyl CoA binding protein VraX PF17412.2 ORF11854 - 0.0018 17.8 0.4 0.0025 17.4 0.3 1.3 1 1 0 1 1 1 1 Family of unknown function OrfB_Zn_ribbon PF07282.11 ORF11828 - 0.14 12.1 1.0 0.2 11.6 1.0 1.4 1 1 0 1 1 1 0 Putative transposase DNA-binding domain Peptidase_M10 PF00413.24 ORF11450 - 0.079 12.8 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Matrixin EamA PF00892.20 ORF112394 - 2.1e-05 24.7 1.9 2.3e-05 24.6 1.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family BenE PF03594.13 ORF112043 - 0.07 11.9 1.3 0.076 11.8 1.3 1.0 1 0 0 1 1 1 0 Benzoate membrane transport protein VHS PF00790.19 ORF111863 - 0.007 16.2 0.3 0.0073 16.2 0.3 1.0 1 0 0 1 1 1 1 VHS domain Flagellin_C PF00700.21 ORF111789 - 0.063 13.6 0.1 0.075 13.4 0.1 1.1 1 0 0 1 1 1 0 Bacterial flagellin C-terminal helical region X PF00739.19 ORF111707 - 0.12 12.5 0.2 0.13 12.4 0.2 1.1 1 0 0 1 1 1 0 Trans-activation protein X DAP_B PF07930.12 ORF111534 - 2.2 8.2 4.3 2.2 8.2 4.3 1.0 1 0 0 1 1 1 0 D-aminopeptidase, domain B GNT-I PF03071.15 ORF111527 - 0.0041 15.9 0.1 0.0042 15.9 0.1 1.0 1 0 0 1 1 1 1 GNT-I family CheW PF01584.19 ORF111495 - 0.024 14.2 0.0 0.027 14.1 0.0 1.1 1 0 0 1 1 1 0 CheW-like domain PsbX PF06596.11 ORF111495 - 1.1 9.3 3.9 0.68 10.0 0.5 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) Ubie_methyltran PF01209.18 ORF111285 - 0.00067 19.1 0.0 0.00072 19.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 ORF111285 - 0.014 16.0 0.1 0.032 14.9 0.1 1.6 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_29 PF03141.16 ORF111285 - 0.064 11.8 0.0 0.073 11.6 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_31 PF13847.6 ORF111285 - 0.068 13.0 0.0 0.072 12.9 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain DUF4210 PF13915.6 ORF110907 - 0.1 13.2 0.0 0.47 11.1 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4210) Ldr_toxin PF13940.6 ORF110666 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system NIF PF03031.18 ORF109997 - 3.3e-08 33.5 0.1 3.9e-08 33.2 0.1 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Lipoprotein_11 PF03260.13 ORF109952 - 0.028 13.8 0.1 0.029 13.7 0.1 1.1 1 0 0 1 1 1 0 Lepidopteran low molecular weight (30 kD) lipoprotein DUF3491 PF11996.8 ORF109871 - 0.058 11.2 0.0 0.058 11.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3491) DUF2262 PF10020.9 ORF108908 - 0.065 13.6 3.2 0.067 13.6 3.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) DUF1869 PF08956.10 ORF10888 - 0.0045 16.9 0.2 0.0068 16.3 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF1869) NapB PF03892.14 ORF10888 - 0.0063 16.5 0.2 0.0073 16.3 0.2 1.0 1 0 0 1 1 1 1 Nitrate reductase cytochrome c-type subunit (NapB) Med27 PF11571.8 ORF10888 - 0.023 15.1 0.1 0.026 14.9 0.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 27 GCS2 PF04107.13 ORF108544 - 0.04 13.3 0.1 0.044 13.1 0.1 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) Ycf70 PF17382.2 ORF108360 - 0.52 10.7 3.0 0.52 10.7 2.3 1.3 1 1 0 1 1 1 0 Uncharacterized Ycf70-like Ldr_toxin PF13940.6 ORF108307 - 0.04 14.0 1.3 0.074 13.1 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system Pkinase PF00069.25 ORF107891 - 1.2e-07 31.3 0.0 1.3e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain PGP_phosphatase PF09419.10 ORF107649 - 0.15 11.7 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase FTCD_N PF07837.12 ORF107628 - 0.11 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Formiminotransferase domain, N-terminal subdomain Pacifastin_I PF05375.13 ORF107285 - 0.059 13.1 3.4 0.08 12.7 1.6 1.9 1 1 1 2 2 2 0 Pacifastin inhibitor (LCMII) G-7-MTase PF12803.7 ORF106876 - 0.088 12.0 0.1 0.094 11.9 0.1 1.0 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) DUF2745 PF10922.8 ORF106795 - 0.072 13.4 0.1 0.086 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2745) Peptidase_S10 PF00450.22 ORF106472 - 1.5e-14 54.3 0.1 1.5e-14 54.2 0.1 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase zf-LITAF-like PF10601.9 ORF10623 - 0.0049 17.1 3.8 0.0062 16.8 3.8 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF2628 PF10947.8 ORF105914 - 0.028 14.8 0.0 0.029 14.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) RhoGEF67_u1 PF16615.5 ORF105618 - 6.2 7.4 14.2 6.3 7.4 2.6 2.4 2 1 0 2 2 2 0 Unstructured region one on RhoGEF 6 and 7 ERGIC_N PF13850.6 ORF105392 - 0.046 14.1 0.1 0.052 13.9 0.1 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Fcf1 PF04900.12 ORF105023 - 0.024 15.0 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Fcf1 KH_1 PF00013.29 ORF10468 - 6.9e-07 29.0 0.3 8.2e-07 28.8 0.3 1.1 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF10468 - 0.0012 18.6 0.5 0.0013 18.5 0.5 1.1 1 0 0 1 1 1 1 KH domain EF-hand_6 PF13405.6 ORF104379 - 0.00015 21.4 0.0 0.00023 20.8 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF104379 - 0.00042 19.7 0.1 0.00062 19.1 0.1 1.3 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF104379 - 0.0013 19.2 2.5 0.15 12.5 0.1 1.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF104379 - 0.0057 16.1 0.4 0.0089 15.5 0.4 1.3 1 0 0 1 1 1 1 EF hand Nse5 PF08691.10 ORF104334 - 0.35 9.5 6.0 0.33 9.6 6.0 1.0 1 0 0 1 1 1 0 DNA repair proteins Nse5 and Nse6 Prenylcys_lyase PF07156.14 ORF104149 - 0.15 11.2 0.1 0.18 10.9 0.1 1.1 1 0 0 1 1 1 0 Prenylcysteine lyase Aim21 PF11489.8 ORF103453 - 0.27 10.1 3.0 0.27 10.1 3.0 1.0 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 21 DUF2207 PF09972.9 ORF103442 - 0.056 12.2 0.2 0.061 12.1 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TMEM208_SND2 PF05620.11 ORF103442 - 0.22 11.3 2.8 0.26 11.0 2.8 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 Renin_r PF07850.14 ORF103442 - 0.49 11.0 2.1 0.32 11.6 0.2 1.7 1 1 1 2 2 2 0 Renin receptor-like protein TNFR_16_TM PF18422.1 ORF103442 - 5.3 7.1 11.9 0.43 10.6 2.9 2.3 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain zf-Tim10_DDP PF02953.15 ORF103401 - 0.015 14.9 1.0 0.38 10.4 0.1 2.1 2 0 0 2 2 2 0 Tim10/DDP family zinc finger TMEM239 PF15841.5 ORF10336 - 0.015 15.2 1.8 0.017 15.0 1.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family Aminotran_3 PF00202.21 ORF103348 - 1.6e-12 46.9 0.0 1.7e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Pro-rich_19 PF15455.6 ORF103246 - 0.07 12.2 0.1 0.078 12.1 0.1 1.0 1 0 0 1 1 1 0 Proline-rich 19 GatB_N PF02934.15 ORF103174 - 0.041 13.3 0.3 0.047 13.1 0.3 1.0 1 0 0 1 1 1 0 GatB/GatE catalytic domain Fcf1 PF04900.12 ORF102778 - 0.024 15.0 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Fcf1 UPAR_LY6 PF00021.21 ORF101618 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF101618 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain GlutR_dimer PF00745.20 ORF101123 - 0.00014 22.2 0.1 0.00016 22.1 0.1 1.1 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain Fib_alpha PF08702.10 ORF101123 - 0.037 14.2 4.4 0.067 13.4 4.4 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Imm3 PF14425.6 ORF101075 - 0.025 14.6 0.2 0.03 14.4 0.2 1.0 1 0 0 1 1 1 0 Immunity protein Imm3 DUF5473 PF17567.2 ORF101042 - 0.11 12.8 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5473) HTH_16 PF12645.7 ORF100888 - 0.092 12.8 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-CCCH_2 PF14608.6 ORF100837 - 0.06 13.8 1.6 0.12 12.8 1.6 1.6 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger CNOT1_TTP_bind PF16417.5 ORF1006 - 0.0062 15.7 0.2 0.0065 15.7 0.2 1.1 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain PriA_3primeBD PF17764.1 ORF100449 - 0.071 13.0 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 3′ DNA-binding domain (3′BD) RsfS PF02410.15 ORF100377 - 4.8e-22 78.2 0.1 5.3e-22 78.1 0.1 1.0 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation DUF1509 PF07420.11 ORF100135 - 3.7 6.4 9.6 4.2 6.2 9.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Clostridium_P47 PF06597.11 NODE_78319_length_202_cov_0.784431_g70378_i0forward_frame_1 - 0.9 8.2 7.4 0.99 8.0 7.4 1.0 1 0 0 1 1 1 0 Clostridium P-47 protein EOS1 PF12326.8 NODE_78319_length_202_cov_0.784431_g70378_i0forward_frame_1 - 3.9 7.4 7.1 4.9 7.0 7.1 1.2 1 0 0 1 1 1 0 N-glycosylation protein DUF2207 PF09972.9 NODE_78319_length_202_cov_0.784431_g70378_i0forward_frame_1 - 7 5.3 10.2 7.6 5.2 10.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4191 PF13829.6 NODE_78319_length_202_cov_0.784431_g70378_i0forward_frame_1 - 8.9 5.6 6.7 9.8 5.4 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) IMUP PF15761.5 NODE_78310_length_202_cov_0.946108_g70369_i0forward_frame_1 - 0.0028 18.3 0.4 0.0031 18.2 0.4 1.1 1 0 0 1 1 1 1 Immortalisation up-regulated protein BioW PF03744.13 NODE_78308_length_202_cov_0.952096_g70367_i0forward_frame_1 - 0.023 14.3 0.6 0.026 14.1 0.6 1.0 1 0 0 1 1 1 0 6-carboxyhexanoate--CoA ligase Atg14 PF10186.9 NODE_78308_length_202_cov_0.952096_g70367_i0forward_frame_1 - 0.77 8.8 3.6 0.83 8.7 3.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PepSY_TM_like_2 PF16357.5 NODE_78305_length_202_cov_0.952096_g70364_i0forward_frame_1 - 0.11 12.4 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative PepSY_TM-like Transket_pyr PF02779.24 NODE_78302_length_202_cov_0.952096_g70361_i0reverse_frame_1 - 0.12 12.0 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 Transketolase, pyrimidine binding domain Prot_inhib_II PF02428.15 NODE_78298_length_202_cov_0.958084_g70357_i0forward_frame_1 - 0.02 15.3 0.6 0.029 14.8 0.6 1.3 1 0 0 1 1 1 0 Potato type II proteinase inhibitor family APC_u14 PF16635.5 NODE_78288_length_202_cov_0.958084_g70347_i0forward_frame_1 - 0.061 13.9 1.0 0.061 13.9 1.0 1.4 2 0 0 2 2 2 0 Unstructured region on APC between SAMP and APC_crr Helo_like_N PF17111.5 NODE_78288_length_202_cov_0.958084_g70347_i0forward_frame_1 - 0.16 11.3 0.1 0.19 11.1 0.1 1.1 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins TetR_C_6 PF13977.6 NODE_78284_length_202_cov_0.958084_g70343_i0forward_frame_1 - 0.23 11.7 0.0 0.27 11.4 0.0 1.1 1 0 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal FeThRed_A PF02941.15 NODE_78277_length_202_cov_0.958084_g70336_i0reverse_frame_1 - 0.12 12.5 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase variable alpha chain YqzH PF14164.6 NODE_78263_length_202_cov_0.976048_g70322_i0forward_frame_1 - 0.067 13.3 0.0 0.087 12.9 0.0 1.1 1 0 0 1 1 1 0 YqzH-like protein MFMR PF07777.11 NODE_78259_length_202_cov_0.994012_g70318_i0forward_frame_1 - 0.042 14.3 0.0 0.046 14.2 0.0 1.1 1 0 0 1 1 1 0 G-box binding protein MFMR YSIRK_signal PF04650.17 NODE_78258_length_202_cov_1.000000_g70317_i0forward_frame_1 - 1.1 9.1 4.7 1.5 8.7 0.9 2.3 2 0 0 2 2 2 0 YSIRK type signal peptide DUF1600 PF07667.11 NODE_78242_length_202_cov_1.065868_g70301_i0forward_frame_1 - 0.075 13.2 7.4 0.083 13.1 7.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) GTP_cyclohydro2 PF00925.20 NODE_78238_length_202_cov_1.107784_g70297_i0forward_frame_1 - 0.14 11.7 0.0 0.16 11.6 0.0 1.0 1 0 0 1 1 1 0 GTP cyclohydrolase II DUF4672 PF15716.5 NODE_78237_length_202_cov_1.107784_g70296_i0reverse_frame_1 - 0.021 14.5 1.0 0.022 14.4 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) E1-E2_ATPase PF00122.20 NODE_78235_length_202_cov_1.113772_g70294_i0forward_frame_1 - 0.31 10.5 0.8 0.35 10.4 0.8 1.0 1 0 0 1 1 1 0 E1-E2 ATPase SAM_Ste50p PF09235.10 NODE_78227_length_202_cov_1.167665_g70286_i0forward_frame_1 - 0.052 13.8 0.2 0.055 13.7 0.2 1.1 1 0 0 1 1 1 0 Ste50p, sterile alpha motif Lamprin PF06403.11 NODE_78225_length_202_cov_1.173653_g70284_i0forward_frame_1 - 0.00051 20.0 4.8 0.00057 19.9 4.8 1.1 1 0 0 1 1 1 1 Lamprin MVL PF12151.8 NODE_78216_length_202_cov_1.185629_g70275_i0forward_frame_1 - 0.2 11.5 0.8 0.29 11.0 0.8 1.2 1 0 0 1 1 1 0 Mannan-binding protein DUF4536 PF15055.6 NODE_78213_length_202_cov_1.197605_g70272_i0reverse_frame_1 - 0.58 10.4 4.1 0.9 9.8 4.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4536) DUF2576 PF10845.8 NODE_78210_length_202_cov_1.197605_g70269_i0forward_frame_1 - 0.036 13.7 1.8 0.91 9.2 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2576) Glyco_trans_1_4 PF13692.6 NODE_78206_length_202_cov_1.239521_g70265_i0reverse_frame_1 - 0.15 12.5 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 NARP1 PF12569.8 NODE_78198_length_202_cov_1.275449_g70257_i0reverse_frame_1 - 5.1 5.9 9.1 5.6 5.8 9.1 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 SH3_13 PF18335.1 NODE_78188_length_202_cov_1.323353_g70247_i0forward_frame_1 - 0.0031 17.3 0.4 0.0034 17.2 0.4 1.3 1 0 0 1 1 1 1 ATP-dependent RecD-like DNA helicase SH3 domain Tet_res_leader PF08050.12 NODE_78183_length_202_cov_1.341317_g70242_i0reverse_frame_1 - 0.04 13.7 0.8 0.04 13.7 0.8 1.9 2 0 0 2 2 2 0 Tetracycline resistance leader peptide SSXRD PF09514.10 NODE_78180_length_202_cov_1.353293_g70239_i0reverse_frame_1 - 1.2 8.8 3.7 2.3 7.9 3.7 1.5 1 0 0 1 1 1 0 SSXRD motif PHTB1_N PF14727.6 NODE_78174_length_202_cov_1.377246_g70233_i0forward_frame_1 - 0.085 12.2 0.0 0.088 12.1 0.0 1.0 1 0 0 1 1 1 0 PTHB1 N-terminus DUF2239 PF09998.9 NODE_78170_length_202_cov_1.401198_g70229_i0reverse_frame_1 - 0.087 12.6 1.4 0.1 12.4 1.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) Proteasom_Rpn13 PF04683.13 NODE_78167_length_202_cov_1.407186_g70226_i0reverse_frame_1 - 0.13 12.9 0.2 0.14 12.7 0.2 1.1 1 0 0 1 1 1 0 Proteasome complex subunit Rpn13 ubiquitin receptor zf-FPG_IleRS PF06827.14 NODE_78152_length_202_cov_1.437126_g70211_i0reverse_frame_1 - 0.026 14.4 0.1 0.052 13.4 0.1 1.5 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS MRP-S33 PF08293.11 NODE_78148_length_202_cov_1.437126_g70207_i0reverse_frame_1 - 0.078 13.2 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit S27 DsrD PF08679.11 NODE_78146_length_202_cov_1.437126_g70205_i0reverse_frame_1 - 0.085 13.1 0.2 0.098 12.9 0.2 1.1 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) UPF0524 PF15823.5 NODE_78143_length_202_cov_1.467066_g70202_i0reverse_frame_1 - 0.36 10.2 3.1 0.4 10.0 3.1 1.0 1 0 0 1 1 1 0 UPF0524 of C3orf70 DUF5556 PF17711.1 NODE_78138_length_202_cov_1.502994_g70197_i0forward_frame_1 - 0.0084 16.1 0.1 0.0084 16.1 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5556) Chloroa_b-bind PF00504.21 NODE_78123_length_202_cov_1.610778_g70182_i0reverse_frame_1 - 5.2e-05 23.8 0.0 8.2e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Chlorophyll A-B binding protein DUF1639 PF07797.14 NODE_78112_length_202_cov_1.670659_g70171_i0reverse_frame_1 - 0.025 14.5 0.1 0.033 14.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) Lamprin PF06403.11 NODE_78101_length_202_cov_1.700599_g70160_i0forward_frame_1 - 0.091 12.7 2.1 0.11 12.4 2.1 1.2 1 0 0 1 1 1 0 Lamprin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks360.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks360.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks360.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks360.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- C12orf66_like PF09404.10 NODE_78084_length_202_cov_1.832335_g70143_i0reverse_frame_1 - 0.035 13.0 0.7 0.038 12.8 0.7 1.0 1 0 0 1 1 1 0 KICSTOR complex C12orf66 like Lamprin PF06403.11 NODE_78077_length_202_cov_1.880240_g70136_i0forward_frame_1 - 0.54 10.2 20.0 0.11 12.5 10.0 2.0 1 1 1 2 2 2 0 Lamprin Clathrin_bdg PF15045.6 NODE_78073_length_202_cov_1.910180_g70132_i0forward_frame_1 - 0.0077 16.2 1.6 0.051 13.6 0.4 2.1 1 1 1 2 2 2 1 Clathrin-binding box of Aftiphilin, vesicle trafficking SHP PF03579.13 NODE_78068_length_202_cov_1.916168_g70127_i0reverse_frame_1 - 0.031 14.2 0.3 0.034 14.1 0.3 1.1 1 0 0 1 1 1 0 Small hydrophobic protein Man-6-P_recep PF02157.15 NODE_78060_length_202_cov_1.994012_g70119_i0forward_frame_1 - 0.093 11.8 0.3 0.085 11.9 0.3 1.0 1 0 0 1 1 1 0 Mannose-6-phosphate receptor PilJ PF13675.6 NODE_78053_length_202_cov_2.041916_g70112_i0reverse_frame_1 - 0.0026 17.7 0.1 0.0032 17.5 0.1 1.1 1 0 0 1 1 1 1 Type IV pili methyl-accepting chemotaxis transducer N-term BLOC1_2 PF10046.9 NODE_78053_length_202_cov_2.041916_g70112_i0reverse_frame_1 - 0.021 15.1 1.0 0.025 14.9 1.0 1.0 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cortex-I_coil PF09304.10 NODE_78053_length_202_cov_2.041916_g70112_i0reverse_frame_1 - 0.046 13.9 1.0 0.055 13.7 1.0 1.1 1 0 0 1 1 1 0 Cortexillin I, coiled coil E2F_CC-MB PF16421.5 NODE_78053_length_202_cov_2.041916_g70112_i0reverse_frame_1 - 0.74 10.2 4.2 1.4 9.4 4.3 1.4 1 1 0 1 1 1 0 E2F transcription factor CC-MB domain DUF5431 PF17496.2 NODE_78046_length_202_cov_2.077844_g70105_i0forward_frame_1 - 0.026 14.7 0.1 0.033 14.3 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5431) Peptidase_M16 PF00675.20 NODE_78044_length_202_cov_2.107784_g70103_i0forward_frame_1 - 4.8e-18 65.6 0.0 5.4e-18 65.4 0.0 1.1 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) GAS PF13851.6 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.00028 20.3 2.7 0.00033 20.1 2.7 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding DUF2046 PF09755.9 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.0012 18.1 1.2 0.0013 18.0 1.2 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) Occludin_ELL PF07303.13 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.0035 18.1 4.5 0.0041 17.8 4.5 1.1 1 0 0 1 1 1 1 Occludin homology domain RmuC PF02646.16 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.0099 15.0 1.7 0.011 14.9 1.7 1.0 1 0 0 1 1 1 1 RmuC family APG6_N PF17675.1 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.01 16.3 1.1 0.011 16.2 1.1 1.0 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF3450 PF11932.8 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.013 14.8 3.2 0.013 14.8 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) KIAA1430 PF13879.6 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.014 16.1 3.1 0.017 15.8 3.1 1.1 1 0 0 1 1 1 0 KIAA1430 homologue TMF_TATA_bd PF12325.8 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.015 15.5 1.9 0.018 15.3 1.9 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Fib_alpha PF08702.10 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.021 15.0 4.4 0.024 14.8 4.4 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.022 14.0 2.0 0.025 13.8 2.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein DRY_EERY PF09750.9 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.024 14.9 2.9 0.027 14.8 2.9 1.2 1 0 0 1 1 1 0 Alternative splicing regulator DegS PF05384.11 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.028 13.9 4.1 0.031 13.7 4.1 1.0 1 0 0 1 1 1 0 Sensor protein DegS CENP-F_leu_zip PF10473.9 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.03 14.3 0.9 0.049 13.7 0.9 1.4 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YabA PF06156.13 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.032 14.9 1.5 0.036 14.7 1.5 1.1 1 0 0 1 1 1 0 Initiation control protein YabA PRKG1_interact PF15898.5 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.039 14.8 3.3 0.048 14.6 3.3 1.1 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain DivIC PF04977.15 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.052 13.3 3.8 0.062 13.1 3.8 1.2 1 0 0 1 1 1 0 Septum formation initiator TPR_MLP1_2 PF07926.12 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.071 13.2 5.1 0.19 11.8 3.5 1.8 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF724 PF05266.14 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.085 12.7 2.1 0.086 12.7 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF349 PF03993.12 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.11 12.8 2.4 0.46 10.8 0.2 2.1 1 1 1 2 2 2 0 Domain of Unknown Function (DUF349) DUF2570 PF10828.8 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.12 12.2 1.0 0.16 11.8 1.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) DUF2721 PF11026.8 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.35 10.7 0.8 0.5 10.3 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) PAP1 PF08601.10 NODE_78025_length_202_cov_2.293413_g70084_i0forward_frame_1 - 3.3 7.3 6.6 3.2 7.4 6.6 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 Lamprin PF06403.11 NODE_78016_length_202_cov_2.532934_g70075_i0forward_frame_1 - 2.6 8.0 14.7 0.39 10.7 7.4 2.0 1 1 1 2 2 2 0 Lamprin Glycolipid_bind PF06475.11 NODE_78013_length_202_cov_2.592814_g70072_i0forward_frame_1 - 0.034 13.6 0.0 0.037 13.5 0.0 1.0 1 0 0 1 1 1 0 Putative glycolipid-binding CP2 PF04516.15 NODE_78011_length_202_cov_2.610778_g70070_i0reverse_frame_1 - 0.02 14.2 0.1 0.024 13.9 0.1 1.0 1 0 0 1 1 1 0 CP2 transcription factor GlgX_C PF18390.1 NODE_78003_length_202_cov_2.946108_g70062_i0forward_frame_1 - 0.15 11.9 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme C-terminal domain Chorein_N PF12624.7 NODE_78001_length_202_cov_3.041916_g70060_i0forward_frame_1 - 0.17 12.0 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 N-terminal region of Chorein or VPS13 DUF5407 PF17401.2 NODE_77998_length_202_cov_3.113772_g70057_i0forward_frame_1 - 0.16 12.3 2.9 0.26 11.6 2.9 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5407) Lamprin PF06403.11 NODE_77997_length_202_cov_3.119760_g70056_i0reverse_frame_1 - 2.8 7.9 11.8 21 5.1 12.0 1.9 1 1 0 1 1 1 0 Lamprin Tape_meas_lam_C PF09718.10 NODE_77993_length_202_cov_3.245509_g70052_i0forward_frame_1 - 0.2 11.8 0.1 0.28 11.4 0.1 1.2 1 0 0 1 1 1 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) Glyco_trans_1_3 PF13528.6 NODE_77991_length_202_cov_3.287425_g70050_i0forward_frame_1 - 0.13 11.5 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 1 SecIII_SopE_N PF05364.14 NODE_77991_length_202_cov_3.287425_g70050_i0forward_frame_1 - 0.14 12.3 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus E7 PF00527.18 NODE_77975_length_202_cov_15.167665_g70034_i0reverse_frame_1 - 0.06 13.6 0.1 0.07 13.3 0.1 1.1 1 0 0 1 1 1 0 E7 protein, Early protein YhzD PF14120.6 NODE_77968_length_202_cov_25.832335_g70027_i0reverse_frame_1 - 0.03 14.4 0.1 0.04 14.0 0.1 1.2 1 0 0 1 1 1 0 YhzD-like protein WW_FCH_linker PF16623.5 NODE_77965_length_202_cov_29.634731_g70024_i0forward_frame_1 - 0.064 14.0 0.5 0.082 13.7 0.5 1.0 1 0 0 1 1 1 0 Unstructured linker region between on GAS7 protein AAA_13 PF13166.6 NODE_77961_length_202_cov_34.592814_g70020_i0forward_frame_1 - 0.26 9.9 0.7 0.26 9.9 0.7 1.0 1 0 0 1 1 1 0 AAA domain Tox-REase-3 PF15647.6 NODE_77954_length_202_cov_37.161677_g70013_i0reverse_frame_1 - 0.1 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 3 WWE PF02825.20 NODE_77945_length_202_cov_41.802395_g70004_i0forward_frame_1 - 0.0015 19.1 0.0 0.0017 18.9 0.0 1.1 1 0 0 1 1 1 1 WWE domain TMEM154 PF15102.6 NODE_77943_length_202_cov_45.916168_g70002_i0forward_frame_1 - 0.12 12.2 0.2 0.13 12.2 0.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family XAF1_C PF18608.1 NODE_77937_length_202_cov_49.694611_g69996_i0reverse_frame_1 - 0.00053 19.5 2.7 0.00079 18.9 2.7 1.3 1 0 0 1 1 1 1 XIAP-associated factor 1 C-terminal domain IL12 PF03039.14 NODE_77930_length_202_cov_57.502994_g69989_i0forward_frame_1 - 0.049 13.0 0.4 0.052 12.9 0.4 1.0 1 0 0 1 1 1 0 Interleukin-12 alpha subunit Pallilysin PF18663.1 NODE_77928_length_202_cov_57.892216_g69987_i0reverse_frame_1 - 0.011 15.7 0.2 0.012 15.6 0.2 1.1 1 0 0 1 1 1 0 Pallilysin beta barrel domain G-7-MTase PF12803.7 NODE_77919_length_202_cov_91.592814_g69978_i0reverse_frame_1 - 0.026 13.7 0.1 0.035 13.3 0.1 1.1 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) YtpI PF14007.6 NODE_77913_length_202_cov_106.946108_g69972_i0forward_frame_1 - 0.057 13.6 1.7 0.079 13.1 1.7 1.2 1 0 0 1 1 1 0 YtpI-like protein DUF4818 PF16089.5 NODE_77908_length_202_cov_131.844311_g69967_i0forward_frame_1 - 0.045 14.2 0.5 0.073 13.5 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4818) Nodulin_late PF07127.11 NODE_77907_length_202_cov_133.473054_g69966_i0forward_frame_1 - 1.3 9.4 4.9 2.3 8.6 4.9 1.4 1 1 0 1 1 1 0 Late nodulin protein DUF4100 PF13352.6 NODE_77906_length_202_cov_133.598802_g69965_i0reverse_frame_1 - 0.063 13.1 0.1 0.063 13.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) UPF0542 PF15086.6 NODE_77903_length_202_cov_142.706587_g69962_i0reverse_frame_1 - 2.1 8.4 6.1 3.7 7.5 6.1 1.6 1 1 0 1 1 1 0 Uncharacterised protein family UPF0542 RHS PF03527.14 NODE_77902_length_202_cov_167.886228_g69961_i0reverse_frame_1 - 0.12 12.2 0.0 0.17 11.7 0.0 1.4 1 1 0 1 1 1 0 RHS protein Imm6 PF14434.6 NODE_77897_length_202_cov_310.664671_g69956_i0reverse_frame_1 - 0.03 14.3 0.4 0.033 14.1 0.4 1.0 1 0 0 1 1 1 0 Immunity protein Imm6 Eclosion PF04736.12 NODE_77890_length_203_cov_0.892857_g69949_i0forward_frame_1 - 0.014 15.0 0.2 0.021 14.5 0.2 1.3 1 0 0 1 1 1 0 Eclosion hormone Pertus-S4-tox PF09275.10 NODE_77876_length_203_cov_0.946429_g69935_i0forward_frame_1 - 0.09 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Pertussis toxin S4 subunit zf-C5HC2 PF02928.16 NODE_77871_length_203_cov_0.952381_g69930_i0forward_frame_1 - 0.0038 17.6 0.9 0.0043 17.4 0.9 1.1 1 0 0 1 1 1 1 C5HC2 zinc finger FYVE_2 PF02318.16 NODE_77871_length_203_cov_0.952381_g69930_i0forward_frame_1 - 0.12 12.6 1.0 0.13 12.5 1.0 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger DUF1648 PF07853.11 NODE_77870_length_203_cov_0.952381_g69929_i0reverse_frame_1 - 0.12 12.1 2.0 0.19 11.4 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1648) Glyco_hydro_38N PF01074.22 NODE_77866_length_203_cov_0.952381_g69925_i0reverse_frame_1 - 1.1e-16 61.0 0.8 1.2e-16 60.9 0.8 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Lipoprotein_Ltp PF07553.11 NODE_77866_length_203_cov_0.952381_g69925_i0reverse_frame_1 - 0.092 13.0 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Host cell surface-exposed lipoprotein Ribosomal_S14 PF00253.21 NODE_77853_length_203_cov_0.952381_g69912_i0forward_frame_1 - 0.018 14.8 0.5 0.02 14.6 0.5 1.3 1 1 0 1 1 1 0 Ribosomal protein S14p/S29e MIT PF04212.18 NODE_77852_length_203_cov_0.952381_g69911_i0forward_frame_1 - 0.041 14.0 0.0 0.059 13.4 0.0 1.2 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain TPR_2 PF07719.17 NODE_77852_length_203_cov_0.952381_g69911_i0forward_frame_1 - 0.078 13.1 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_77852_length_203_cov_0.952381_g69911_i0forward_frame_1 - 0.093 12.6 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Ribosomal_L37e PF01907.19 NODE_77846_length_203_cov_0.952381_g69905_i0reverse_frame_1 - 0.45 10.7 0.3 0.45 10.7 0.3 1.9 3 0 0 3 3 3 0 Ribosomal protein L37e Anthrax_toxA PF03497.16 NODE_77845_length_203_cov_0.952381_g69904_i0reverse_frame_1 - 0.058 13.5 0.3 0.062 13.4 0.3 1.0 1 0 0 1 1 1 0 Anthrax toxin LF subunit zf-RNPHF PF08080.12 NODE_77844_length_203_cov_0.952381_g69903_i0forward_frame_1 - 0.15 12.1 0.2 0.22 11.5 0.2 1.3 1 0 0 1 1 1 0 RNPHF zinc finger ATP-synt_F6 PF05511.11 NODE_77836_length_203_cov_1.065476_g69895_i0forward_frame_1 - 0.0079 16.6 0.0 0.0088 16.4 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ATP synthase coupling factor 6 Fer4_19 PF06902.11 NODE_77836_length_203_cov_1.065476_g69895_i0forward_frame_1 - 0.063 13.4 0.0 0.077 13.1 0.0 1.1 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster FoP_duplication PF13865.6 NODE_77831_length_203_cov_1.077381_g69890_i0forward_frame_1 - 0.13 12.8 0.0 0.15 12.6 0.0 1.1 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 S10_plectin PF03501.15 NODE_77815_length_203_cov_1.166667_g69874_i0forward_frame_1 - 0.047 13.8 0.0 0.058 13.5 0.0 1.2 1 0 0 1 1 1 0 Plectin/S10 domain Pax7 PF12360.8 NODE_77808_length_203_cov_1.184524_g69867_i0forward_frame_1 - 0.073 13.3 0.3 0.097 12.9 0.3 1.3 1 0 0 1 1 1 0 Paired box protein 7 zf-FLZ PF04570.14 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_1 - 0.084 12.4 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 tRNA_bind PF01588.20 NODE_77789_length_203_cov_1.255952_g69848_i0reverse_frame_1 - 1e-06 28.8 0.1 1.5e-06 28.2 0.1 1.3 1 0 0 1 1 1 1 Putative tRNA binding domain LTXXQ PF07813.12 NODE_77785_length_203_cov_1.267857_g69844_i0reverse_frame_1 - 2.3e-06 28.3 1.3 2.6e-06 28.1 0.1 1.6 2 0 0 2 2 2 1 LTXXQ motif family protein SAM_1 PF00536.30 NODE_77781_length_203_cov_1.321429_g69840_i0reverse_frame_1 - 0.034 14.6 0.6 0.038 14.4 0.6 1.1 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Porin_10 PF14121.6 NODE_77775_length_203_cov_1.369048_g69834_i0reverse_frame_1 - 0.016 13.8 0.3 0.018 13.7 0.3 1.0 1 0 0 1 1 1 0 Putative porin COX4_pro PF03626.14 NODE_77769_length_203_cov_1.398810_g69828_i0reverse_frame_1 - 0.07 13.6 2.5 3.7 8.0 0.1 2.2 2 1 0 2 2 2 0 Prokaryotic Cytochrome C oxidase subunit IV KASH PF10541.9 NODE_77753_length_203_cov_1.428571_g69812_i0reverse_frame_1 - 0.047 13.9 6.6 0.047 13.9 6.6 2.2 1 1 1 2 2 2 0 Nuclear envelope localisation domain SR-25 PF10500.9 NODE_77753_length_203_cov_1.428571_g69812_i0forward_frame_1 - 0.12 11.9 14.6 0.12 11.9 14.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RSN1_7TM PF02714.15 NODE_77751_length_203_cov_1.428571_g69810_i0forward_frame_1 - 0.0045 16.3 2.4 0.0045 16.3 2.4 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate VirB3 PF05101.13 NODE_77751_length_203_cov_1.428571_g69810_i0forward_frame_1 - 0.067 13.4 2.1 0.078 13.2 2.1 1.1 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein VPS9 PF02204.18 NODE_77750_length_203_cov_1.428571_g69809_i0reverse_frame_1 - 9e-07 29.1 0.3 9.5e-07 29.0 0.3 1.0 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain Tet_JBP PF12851.7 NODE_77738_length_203_cov_1.434524_g69797_i0forward_frame_1 - 0.0067 15.8 0.0 0.0071 15.7 0.0 1.0 1 0 0 1 1 1 1 Oxygenase domain of the 2OGFeDO superfamily DUF316 PF03761.15 NODE_77732_length_203_cov_1.494048_g69791_i0forward_frame_1 - 0.062 12.9 0.4 0.064 12.8 0.4 1.0 1 0 0 1 1 1 0 Chymotrypsin family Peptidase-S1 CLN3 PF02487.17 NODE_77729_length_203_cov_1.505952_g69788_i0forward_frame_1 - 1.1e-05 24.7 7.2 1.2e-05 24.6 7.2 1.0 1 0 0 1 1 1 1 CLN3 protein DUF4636 PF15468.6 NODE_77729_length_203_cov_1.505952_g69788_i0forward_frame_1 - 1.9 8.1 3.1 2.2 7.9 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) DUF4191 PF13829.6 NODE_77729_length_203_cov_1.505952_g69788_i0forward_frame_1 - 9.3 5.5 5.4 11 5.3 5.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Pertactin PF03212.14 NODE_77726_length_203_cov_1.523810_g69785_i0reverse_frame_1 - 0.00041 20.3 0.6 0.00047 20.1 0.6 1.0 1 0 0 1 1 1 1 Pertactin Sin3a_C PF16879.5 NODE_77721_length_203_cov_1.547619_g69780_i0reverse_frame_1 - 0.0068 16.2 0.2 0.0071 16.1 0.2 1.0 1 0 0 1 1 1 1 C-terminal domain of Sin3a protein SARS_lipid_bind PF09399.10 NODE_77719_length_203_cov_1.547619_g69778_i0reverse_frame_1 - 0.075 13.2 0.1 0.082 13.1 0.1 1.1 1 0 0 1 1 1 0 SARS lipid binding protein Pyridoxal_deC PF00282.19 NODE_77718_length_203_cov_1.553571_g69777_i0forward_frame_1 - 0.049 12.3 0.2 0.064 12.0 0.2 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain Albumin_I PF08027.11 NODE_77710_length_203_cov_1.613095_g69769_i0reverse_frame_1 - 0.078 12.6 0.7 0.078 12.6 0.7 2.2 2 0 0 2 2 2 0 Albumin I chain b RCC1 PF00415.18 NODE_77709_length_203_cov_1.613095_g69768_i0reverse_frame_1 - 0.014 16.0 0.1 0.047 14.3 0.1 1.8 1 1 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat Herpeto_peptide PF14409.6 NODE_77702_length_203_cov_1.654762_g69761_i0forward_frame_1 - 4 7.8 6.2 2.3 8.5 0.3 2.1 2 0 0 2 2 2 0 Ribosomally synthesized peptide in Herpetosiphon dUTPase_2 PF08761.11 NODE_77698_length_203_cov_1.666667_g69757_i0forward_frame_1 - 0.091 12.9 0.6 0.11 12.6 0.6 1.1 1 0 0 1 1 1 0 dUTPase DUF1447 PF07288.11 NODE_77696_length_203_cov_1.666667_g69755_i0forward_frame_1 - 0.062 13.4 0.1 0.08 13.0 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1447) Serinc PF03348.15 NODE_77696_length_203_cov_1.666667_g69755_i0forward_frame_1 - 0.12 11.2 0.2 0.14 11.1 0.2 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) DUF1463 PF07316.11 NODE_77693_length_203_cov_1.690476_g69752_i0reverse_frame_1 - 0.092 12.6 0.0 0.092 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1463) YHS PF04945.13 NODE_77693_length_203_cov_1.690476_g69752_i0forward_frame_1 - 0.018 15.2 0.1 0.035 14.2 0.1 1.5 1 0 0 1 1 1 0 YHS domain Glyco_hydro_43 PF04616.14 NODE_77693_length_203_cov_1.690476_g69752_i0forward_frame_1 - 0.061 12.6 0.0 0.068 12.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 43 PRP8_domainIV PF12134.8 NODE_77693_length_203_cov_1.690476_g69752_i0forward_frame_1 - 0.11 12.1 0.1 0.11 12.1 0.1 1.0 1 0 0 1 1 1 0 PRP8 domain IV core DUF3833 PF12915.7 NODE_77686_length_203_cov_1.738095_g69745_i0reverse_frame_1 - 0.025 14.2 0.0 0.028 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3833) Orn_Arg_deC_N PF02784.16 NODE_77675_length_203_cov_1.791667_g69734_i0reverse_frame_1 - 0.04 13.3 0.1 0.044 13.2 0.1 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Retrotran_gag_2 PF14223.6 NODE_77675_length_203_cov_1.791667_g69734_i0reverse_frame_1 - 0.084 12.5 0.2 0.11 12.2 0.2 1.1 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type DUF2443 PF10398.9 NODE_77675_length_203_cov_1.791667_g69734_i0reverse_frame_1 - 0.09 12.8 0.2 0.11 12.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) Osmo_CC PF08946.10 NODE_77675_length_203_cov_1.791667_g69734_i0reverse_frame_1 - 0.12 12.7 0.2 0.15 12.3 0.2 1.1 1 0 0 1 1 1 0 Osmosensory transporter coiled coil CENP-F_leu_zip PF10473.9 NODE_77654_length_203_cov_1.946429_g69713_i0reverse_frame_1 - 0.0012 18.8 0.8 0.0012 18.8 0.8 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3232 PF11554.8 NODE_77654_length_203_cov_1.946429_g69713_i0reverse_frame_1 - 0.042 14.2 3.1 0.046 14.1 3.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) ABC_tran PF00005.27 NODE_77653_length_203_cov_1.952381_g69712_i0forward_frame_1 - 4.8e-07 30.4 0.1 7.2e-07 29.8 0.1 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_77653_length_203_cov_1.952381_g69712_i0forward_frame_1 - 0.00029 20.8 0.0 0.00031 20.6 0.0 1.0 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Lipoprotein_9 PF03180.14 NODE_77652_length_203_cov_1.958333_g69711_i0forward_frame_1 - 0.14 11.2 0.0 0.16 11.1 0.0 1.0 1 0 0 1 1 1 0 NLPA lipoprotein V_ATPase_I PF01496.19 NODE_77648_length_203_cov_1.994048_g69707_i0reverse_frame_1 - 2.2e-06 25.9 0.0 2.3e-06 25.9 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family a_DG1_N2 PF18424.1 NODE_77643_length_203_cov_2.041667_g69702_i0forward_frame_1 - 0.082 13.0 0.3 0.09 12.9 0.3 1.2 1 0 0 1 1 1 0 Alpha-Dystroglycan N-terminal domain 2 Presenilin PF01080.17 NODE_77635_length_203_cov_2.101190_g69694_i0forward_frame_1 - 4.3 6.0 6.8 5 5.8 6.8 1.0 1 0 0 1 1 1 0 Presenilin Ank_4 PF13637.6 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 1.2e-06 29.0 0.4 1.6e-06 28.6 0.4 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 6.4e-06 26.7 0.1 7.9e-06 26.4 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 3.6e-05 23.9 0.9 0.011 16.0 0.3 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 9.1e-05 22.6 0.4 0.13 12.8 0.1 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 0.035 14.6 0.2 1.2 9.8 0.1 2.1 2 0 0 2 2 2 0 Ankyrin repeat Stc1 PF12898.7 NODE_77631_length_203_cov_2.172619_g69690_i0reverse_frame_1 - 0.035 14.6 0.2 0.042 14.4 0.2 1.1 1 0 0 1 1 1 0 Stc1 domain ALG3 PF05208.13 NODE_77622_length_203_cov_2.273810_g69681_i0reverse_frame_1 - 6.2e-11 42.3 1.3 6.8e-11 42.2 1.3 1.0 1 0 0 1 1 1 1 ALG3 protein Polysacc_syn_2C PF08485.10 NODE_77620_length_203_cov_2.315476_g69679_i0reverse_frame_1 - 0.02 14.6 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein C-terminal DUF302 PF03625.14 NODE_77591_length_203_cov_2.773810_g69650_i0reverse_frame_1 - 0.11 12.4 0.5 0.57 10.1 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function DUF302 EGF PF00008.27 NODE_77587_length_203_cov_2.851190_g69646_i0forward_frame_1 - 2.3 8.6 8.9 26 5.3 1.9 3.0 3 0 0 3 3 3 0 EGF-like domain zf-CRD PF17979.1 NODE_77574_length_203_cov_3.327381_g69633_i0reverse_frame_1 - 0.64 10.1 6.4 1.1 9.3 6.4 1.5 1 1 0 1 1 1 0 Cysteine rich domain with multizinc binding regions Zds_C PF08632.10 NODE_77568_length_203_cov_3.630952_g69627_i0forward_frame_1 - 0.073 12.8 2.1 0.29 10.9 0.9 2.2 2 1 0 2 2 2 0 Activator of mitotic machinery Cdc14 phosphatase activation C-term DUF4400 PF14348.6 NODE_77543_length_203_cov_34.970238_g69602_i0forward_frame_1 - 0.12 11.9 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) SOCS_box PF07525.16 NODE_77542_length_203_cov_35.083333_g69601_i0forward_frame_1 - 0.037 14.4 0.4 0.055 13.8 0.4 1.2 1 0 0 1 1 1 0 SOCS box DnaI_N PF07319.11 NODE_77535_length_203_cov_37.916667_g69594_i0reverse_frame_1 - 0.12 13.1 6.5 0.14 12.8 6.5 1.2 1 0 0 1 1 1 0 Primosomal protein DnaI N-terminus DUF5357 PF17310.2 NODE_77535_length_203_cov_37.916667_g69594_i0reverse_frame_1 - 2.2 6.8 5.5 2.3 6.7 5.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) p12I PF12233.8 NODE_77526_length_203_cov_45.666667_g69585_i0forward_frame_1 - 0.033 14.7 5.1 0.036 14.6 5.1 1.1 1 0 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein Microcin PF03526.13 NODE_77523_length_203_cov_51.130952_g69582_i0forward_frame_1 - 0.16 11.8 0.6 0.16 11.8 0.6 1.5 2 0 0 2 2 2 0 Colicin E1 (microcin) immunity protein ATP-synt_8 PF00895.20 NODE_77517_length_203_cov_60.702381_g69576_i0reverse_frame_1 - 0.044 14.2 0.3 0.068 13.6 0.3 1.3 1 0 0 1 1 1 0 ATP synthase protein 8 DUF3964 PF13107.6 NODE_77516_length_203_cov_61.541667_g69575_i0forward_frame_1 - 0.045 14.1 0.1 0.048 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3964) ToxN_toxin PF13958.6 NODE_77514_length_203_cov_65.738095_g69573_i0reverse_frame_1 - 0.046 14.0 0.7 0.055 13.7 0.7 1.1 1 0 0 1 1 1 0 Toxin ToxN, type III toxin-antitoxin system DUF4995 PF16386.5 NODE_77513_length_203_cov_68.589286_g69572_i0forward_frame_1 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function AMMECR1 PF01871.17 NODE_77508_length_203_cov_82.428571_g69567_i0reverse_frame_1 - 0.0033 17.1 0.0 0.0041 16.7 0.0 1.2 1 0 0 1 1 1 1 AMMECR1 DUF3708 PF12501.8 NODE_77504_length_203_cov_95.654762_g69563_i0forward_frame_1 - 0.092 12.5 0.0 0.1 12.4 0.0 1.0 1 0 0 1 1 1 0 Phosphate ATP-binding cassette transporter SUKH-4 PF14435.6 NODE_77497_length_203_cov_128.863095_g69556_i0reverse_frame_1 - 0.12 12.4 0.1 0.16 12.0 0.1 1.1 1 0 0 1 1 1 0 SUKH-4 immunity protein YajC PF02699.15 NODE_77492_length_203_cov_211.880952_g69551_i0forward_frame_1 - 0.019 14.8 0.7 0.028 14.3 0.7 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit AAA_12 PF13087.6 NODE_77492_length_203_cov_211.880952_g69551_i0forward_frame_1 - 0.034 13.7 0.5 0.041 13.5 0.5 1.0 1 0 0 1 1 1 0 AAA domain DUF5436 PF17504.2 NODE_77492_length_203_cov_211.880952_g69551_i0forward_frame_1 - 0.5 10.7 2.6 0.69 10.3 2.4 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5436) Tnp_DNA_bind PF14706.6 NODE_77491_length_203_cov_219.613095_g69550_i0forward_frame_1 - 0.047 13.5 0.0 0.077 12.9 0.0 1.3 1 0 0 1 1 1 0 Transposase DNA-binding PEGSRP PF07623.11 NODE_77488_length_203_cov_298.827381_g69547_i0forward_frame_1 - 0.027 14.2 3.5 0.3 10.9 1.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DUF2633 PF11119.8 NODE_77487_length_203_cov_484.678571_g69546_i0forward_frame_1 - 0.066 13.1 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) PRIMA1 PF16101.5 NODE_77483_length_204_cov_0.905325_g69542_i0forward_frame_1 - 0.39 10.8 3.5 0.49 10.4 3.5 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Cpta_toxin PF07254.12 NODE_77482_length_204_cov_0.917160_g69541_i0forward_frame_1 - 0.095 12.7 1.0 0.12 12.4 1.0 1.1 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system AChE_tetra PF08674.10 NODE_77481_length_204_cov_0.917160_g69540_i0forward_frame_1 - 0.24 11.1 0.3 0.24 11.1 0.3 1.5 2 0 0 2 2 2 0 Acetylcholinesterase tetramerisation domain GPR_Gpa2_C PF11970.8 NODE_77479_length_204_cov_0.934911_g69538_i0reverse_frame_1 - 0.047 13.8 0.1 0.061 13.4 0.1 1.3 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term Rtt106_N PF18215.1 NODE_77479_length_204_cov_0.934911_g69538_i0forward_frame_1 - 0.15 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain DinB_2 PF12867.7 NODE_77475_length_204_cov_0.940828_g69534_i0forward_frame_1 - 0.11 13.0 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 DinB superfamily RELT PF12606.8 NODE_77464_length_204_cov_0.946746_g69523_i0forward_frame_1 - 0.24 10.4 0.7 0.87 8.6 0.0 1.9 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 DAO_C PF16901.5 NODE_77438_length_204_cov_1.035503_g69497_i0reverse_frame_1 - 0.00043 20.2 0.0 0.0005 19.9 0.0 1.0 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase GXWXG PF14231.6 NODE_77437_length_204_cov_1.047337_g69496_i0reverse_frame_1 - 0.11 12.5 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 GXWXG protein NID PF07292.13 NODE_77435_length_204_cov_1.059172_g69494_i0forward_frame_1 - 0.02 15.5 0.1 0.024 15.3 0.1 1.1 1 0 0 1 1 1 0 Nmi/IFP 35 domain (NID) DUF4705 PF15788.5 NODE_77434_length_204_cov_1.065089_g69493_i0forward_frame_1 - 0.061 13.6 5.1 0.12 12.7 2.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4705) LAGLIDADG_1 PF00961.19 NODE_77429_length_204_cov_1.124260_g69488_i0forward_frame_1 - 0.00029 21.7 1.1 0.00033 21.6 1.1 1.0 1 0 0 1 1 1 1 LAGLIDADG endonuclease Bap31_Bap29_C PF18035.1 NODE_77427_length_204_cov_1.142012_g69486_i0forward_frame_1 - 0.35 10.9 4.2 0.11 12.5 1.4 1.6 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain FLYWCH_N PF15423.6 NODE_77422_length_204_cov_1.177515_g69481_i0forward_frame_1 - 0.011 15.8 0.2 0.013 15.6 0.2 1.3 1 1 0 1 1 1 0 FLYWCH-type zinc finger-containing protein SecIII_SopE_N PF05364.14 NODE_77409_length_204_cov_1.230769_g69468_i0reverse_frame_1 - 0.12 12.5 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus DUF4406 PF14359.6 NODE_77408_length_204_cov_1.230769_g69467_i0reverse_frame_1 - 0.049 14.1 0.0 0.057 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4406) YscK PF06578.12 NODE_77408_length_204_cov_1.230769_g69467_i0forward_frame_1 - 0.033 13.7 0.0 0.035 13.6 0.0 1.0 1 0 0 1 1 1 0 YOP proteins translocation protein K (YscK) HTH_6 PF01418.17 NODE_77398_length_204_cov_1.284024_g69457_i0forward_frame_1 - 0.087 12.8 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family UVR PF02151.19 NODE_77393_length_204_cov_1.301775_g69452_i0reverse_frame_1 - 0.00079 19.1 6.5 0.00079 19.1 6.5 2.0 2 0 0 2 2 2 1 UvrB/uvrC motif FRG1 PF06229.12 NODE_77393_length_204_cov_1.301775_g69452_i0reverse_frame_1 - 0.11 12.2 2.5 0.1 12.3 2.5 1.1 1 0 0 1 1 1 0 FRG1-like domain Ntox1 PF15500.6 NODE_77393_length_204_cov_1.301775_g69452_i0reverse_frame_1 - 0.13 12.6 1.2 0.15 12.4 1.2 1.1 1 0 0 1 1 1 0 Putative RNase-like toxin, toxin_1 UCR_Fe-S_N PF10399.9 NODE_77382_length_204_cov_1.396450_g69441_i0reverse_frame_1 - 0.16 11.3 0.1 0.28 10.6 0.1 1.3 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IPTL-CTERM PF18203.1 NODE_77381_length_204_cov_1.396450_g69440_i0reverse_frame_1 - 0.085 12.8 1.6 0.085 12.8 1.6 1.5 2 0 0 2 2 2 0 IPTL-CTERM motif Presenilin PF01080.17 NODE_77363_length_204_cov_1.449704_g69422_i0forward_frame_1 - 0.0094 14.8 1.7 0.0092 14.8 1.7 1.0 1 0 0 1 1 1 1 Presenilin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks361.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks361.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks361.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks361.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:09:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Carot_N PF09150.10 NODE_77349_length_204_cov_1.544379_g69408_i0reverse_frame_1 - 0.038 13.9 0.2 0.044 13.7 0.1 1.2 1 1 0 1 1 1 0 Orange carotenoid protein, N-terminal DUF2845 PF11006.8 NODE_77348_length_204_cov_1.544379_g69407_i0forward_frame_1 - 0.083 13.0 0.0 0.091 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2845) DEAD PF00270.29 NODE_77336_length_204_cov_1.597633_g69395_i0reverse_frame_1 - 4.6e-11 42.8 0.0 5.6e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase PhoH PF02562.16 NODE_77336_length_204_cov_1.597633_g69395_i0reverse_frame_1 - 0.01 15.3 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 0 PhoH-like protein ResIII PF04851.15 NODE_77336_length_204_cov_1.597633_g69395_i0reverse_frame_1 - 0.027 14.5 0.0 0.028 14.4 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Neisseria_PilC PF05567.11 NODE_77335_length_204_cov_1.609467_g69394_i0forward_frame_1 - 0.0039 16.2 0.0 0.0039 16.2 0.0 1.0 1 0 0 1 1 1 1 Neisseria PilC beta-propeller domain Gallidermin PF02052.15 NODE_77333_length_204_cov_1.627219_g69392_i0reverse_frame_1 - 0.074 13.4 0.1 0.13 12.6 0.1 1.3 1 0 0 1 1 1 0 Gallidermin tRNA_lig_kinase PF08303.11 NODE_77332_length_204_cov_1.633136_g69391_i0reverse_frame_1 - 0.07 13.2 1.6 0.082 13.0 1.6 1.1 1 0 0 1 1 1 0 tRNA ligase kinase domain PPR PF01535.20 NODE_77331_length_204_cov_1.639053_g69390_i0reverse_frame_1 - 4.8e-05 23.3 0.2 0.11 12.8 0.0 2.2 2 0 0 2 2 2 2 PPR repeat PPR_2 PF13041.6 NODE_77331_length_204_cov_1.639053_g69390_i0reverse_frame_1 - 0.00061 19.9 0.1 0.81 9.9 0.0 2.1 2 0 0 2 2 2 2 PPR repeat family PPR_1 PF12854.7 NODE_77331_length_204_cov_1.639053_g69390_i0reverse_frame_1 - 0.11 12.3 0.1 4.8 7.0 0.1 2.1 2 0 0 2 2 2 0 PPR repeat PYRIN PF02758.16 NODE_77331_length_204_cov_1.639053_g69390_i0reverse_frame_1 - 0.12 12.5 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain CxC3 PF18804.1 NODE_77326_length_204_cov_1.650888_g69385_i0reverse_frame_1 - 0.018 14.9 0.1 0.022 14.6 0.1 1.2 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases RNA_POL_M_15KD PF02150.16 NODE_77326_length_204_cov_1.650888_g69385_i0reverse_frame_1 - 0.02 14.7 0.0 0.046 13.6 0.0 1.6 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit Stomagen PF16851.5 NODE_77326_length_204_cov_1.650888_g69385_i0reverse_frame_1 - 0.033 14.2 1.8 0.05 13.6 1.8 1.5 1 1 0 1 1 1 0 Stomagen Herpes_UL16 PF03044.14 NODE_77321_length_204_cov_1.698225_g69380_i0reverse_frame_1 - 0.071 12.4 4.0 0.067 12.5 4.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family CA_like PF10563.9 NODE_77320_length_204_cov_1.727811_g69379_i0reverse_frame_1 - 0.086 12.8 0.0 0.086 12.8 0.0 1.1 1 0 0 1 1 1 0 Putative carbonic anhydrase DUF1031 PF06275.11 NODE_77309_length_204_cov_1.857988_g69368_i0forward_frame_1 - 0.06 13.6 0.3 0.25 11.6 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1031) AIMP2_LysRS_bd PF16780.5 NODE_77305_length_204_cov_1.869822_g69364_i0reverse_frame_1 - 0.14 11.9 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 AIMP2 lysyl-tRNA synthetase binding domain TAD2 PF18521.1 NODE_77303_length_204_cov_1.887574_g69362_i0forward_frame_1 - 0.091 12.8 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Transactivation domain 2 Glu_cyclase_2 PF05096.12 NODE_77301_length_204_cov_1.893491_g69360_i0forward_frame_1 - 6.4e-07 29.1 0.3 6.4e-07 29.1 0.3 1.2 1 0 0 1 1 1 1 Glutamine cyclotransferase DUF3272 PF11676.8 NODE_77301_length_204_cov_1.893491_g69360_i0forward_frame_1 - 0.014 15.6 0.2 0.022 15.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3272) SH3_16 PF18348.1 NODE_77287_length_204_cov_2.000000_g69346_i0forward_frame_1 - 0.12 12.1 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial dipeptidyl-peptidase Sh3 domain DUF2325 PF10087.9 NODE_77283_length_204_cov_2.011834_g69342_i0forward_frame_1 - 0.081 13.1 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2325) NdhL PF10716.9 NODE_77282_length_204_cov_2.023669_g69341_i0forward_frame_1 - 0.059 13.3 3.1 0.064 13.2 3.1 1.1 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit baeRF_family7 PF18849.1 NODE_77273_length_204_cov_2.071006_g69332_i0forward_frame_1 - 0.034 14.3 0.0 0.039 14.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 7 DDE_1 PF03184.19 NODE_77265_length_204_cov_2.112426_g69324_i0reverse_frame_1 - 0.00011 21.9 0.0 0.00013 21.7 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease rve PF00665.26 NODE_77260_length_204_cov_2.142012_g69319_i0reverse_frame_1 - 0.031 14.5 0.0 0.036 14.3 0.0 1.0 1 0 0 1 1 1 0 Integrase core domain Peptidase_S9 PF00326.21 NODE_77260_length_204_cov_2.142012_g69319_i0reverse_frame_1 - 0.033 13.6 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 Prolyl oligopeptidase family AAA_25 PF13481.6 NODE_77260_length_204_cov_2.142012_g69319_i0reverse_frame_1 - 0.12 11.9 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain Nup35_RRM PF05172.13 NODE_77259_length_204_cov_2.147929_g69318_i0forward_frame_1 - 0.059 13.3 0.0 0.059 13.3 0.0 1.1 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif ApoB100_C PF12491.8 NODE_77256_length_204_cov_2.165680_g69315_i0reverse_frame_1 - 0.031 14.2 0.0 0.048 13.6 0.0 1.3 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal SH3_16 PF18348.1 NODE_77250_length_204_cov_2.236686_g69309_i0forward_frame_1 - 0.12 12.1 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial dipeptidyl-peptidase Sh3 domain DUF3413 PF11893.8 NODE_77249_length_204_cov_2.242604_g69308_i0reverse_frame_1 - 0.064 12.4 3.8 0.071 12.3 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) DUF5421 PF17458.2 NODE_77249_length_204_cov_2.242604_g69308_i0forward_frame_1 - 0.083 12.3 0.3 0.095 12.1 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5421) RcpB PF16971.5 NODE_77247_length_204_cov_2.248521_g69306_i0reverse_frame_1 - 0.2 11.5 0.0 0.44 10.4 0.0 1.4 1 1 0 1 1 1 0 Rough colony protein B, tight adherence - tad - subunit RVT_3 PF13456.6 NODE_77235_length_204_cov_2.426036_g69294_i0reverse_frame_1 - 0.026 14.3 0.0 0.027 14.3 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase-like KCT2 PF17818.1 NODE_77233_length_204_cov_2.497041_g69292_i0reverse_frame_1 - 0.77 9.9 2.5 0.99 9.5 2.5 1.1 1 0 0 1 1 1 0 Keratinocyte-associated gene product YchF-GTPase_C PF06071.13 NODE_77233_length_204_cov_2.497041_g69292_i0forward_frame_1 - 7.4e-25 87.0 0.6 8.2e-25 86.8 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF933) Osmo_CC PF08946.10 NODE_77222_length_204_cov_2.674556_g69281_i0reverse_frame_1 - 0.16 12.2 0.5 0.23 11.7 0.5 1.3 1 0 0 1 1 1 0 Osmosensory transporter coiled coil YojJ PF10372.9 NODE_77222_length_204_cov_2.674556_g69281_i0forward_frame_1 - 0.058 13.5 0.7 0.073 13.2 0.1 1.5 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus YbjN PF10722.9 NODE_77221_length_204_cov_2.692308_g69280_i0forward_frame_1 - 0.012 15.7 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Putative bacterial sensory transduction regulator HTH_1 PF00126.27 NODE_77214_length_204_cov_2.840237_g69273_i0forward_frame_1 - 0.0012 18.8 0.1 0.002 18.0 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family TMEM132D_C PF15706.5 NODE_77212_length_204_cov_2.887574_g69271_i0reverse_frame_1 - 0.077 12.8 0.9 0.089 12.6 0.9 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Orai-1 PF07856.12 NODE_77212_length_204_cov_2.887574_g69271_i0reverse_frame_1 - 0.17 11.6 5.0 0.19 11.4 5.0 1.1 1 0 0 1 1 1 0 Mediator of CRAC channel activity zf_C2H2_6 PF18450.1 NODE_77209_length_204_cov_2.899408_g69268_i0forward_frame_1 - 0.76 9.5 4.4 2.9 7.7 1.6 2.2 2 0 0 2 2 2 0 Zinc Finger domain Rrn6 PF10214.9 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_1 - 5 5.5 17.8 5.6 5.3 17.8 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor CxC2 PF18803.1 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_1 - 0.075 13.2 2.1 0.079 13.1 2.1 1.1 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases Mucin PF01456.17 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_1 - 3.8 7.5 25.4 4.7 7.2 25.4 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DDE_Tnp_1 PF01609.21 NODE_77205_length_204_cov_3.094675_g69264_i0reverse_frame_1 - 0.0054 16.4 0.1 0.006 16.3 0.1 1.1 1 0 0 1 1 1 1 Transposase DDE domain UPF0147 PF03685.13 NODE_77202_length_204_cov_3.171598_g69261_i0reverse_frame_1 - 0.069 13.2 0.0 0.077 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) Ank_4 PF13637.6 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 2.5e-10 40.7 0.1 1.3e-08 35.2 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 4.7e-07 30.3 0.2 5.6e-07 30.1 0.2 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 2.3e-06 27.5 0.0 0.0095 16.4 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 2.2e-05 24.6 0.0 0.0012 19.1 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 0.0012 19.3 0.2 0.004 17.5 0.0 1.9 2 1 0 2 2 2 1 Ankyrin repeat DUF3368 PF11848.8 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 0.15 11.8 0.0 0.58 10.0 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3368) ACBP PF00887.19 NODE_77179_length_204_cov_35.426036_g69238_i0reverse_frame_1 - 0.0039 17.4 0.2 0.0039 17.4 0.2 1.5 2 0 0 2 2 2 1 Acyl CoA binding protein Corona_NS3b PF03053.14 NODE_77178_length_204_cov_37.426036_g69237_i0forward_frame_1 - 0.66 9.7 7.7 0.69 9.6 7.7 1.0 1 0 0 1 1 1 0 ORF3b coronavirus protein Arteri_Gl PF00951.18 NODE_77174_length_204_cov_40.692308_g69233_i0reverse_frame_1 - 0.0094 15.8 0.8 0.0099 15.7 0.8 1.1 1 0 0 1 1 1 1 Arterivirus GL envelope glycoprotein Adeno_E3B PF03376.14 NODE_77170_length_204_cov_43.059172_g69229_i0reverse_frame_1 - 0.0022 18.2 0.2 0.0026 18.0 0.2 1.1 1 0 0 1 1 1 1 Adenovirus E3B protein NUC130_3NT PF08158.12 NODE_77166_length_204_cov_46.686391_g69225_i0forward_frame_1 - 0.13 12.6 0.1 0.16 12.3 0.1 1.1 1 0 0 1 1 1 0 NUC130/3NT domain Nterm_IS4 PF13006.7 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_1 - 0.029 14.6 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Insertion element 4 transposase N-terminal Fanconi_A PF03511.14 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_1 - 0.037 13.9 0.0 0.042 13.8 0.0 1.1 1 0 0 1 1 1 0 Fanconi anaemia group A protein DUF1131 PF06572.12 NODE_77150_length_204_cov_63.550296_g69209_i0forward_frame_1 - 0.015 15.1 0.1 0.016 15.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1131) PigN PF04987.14 NODE_77146_length_204_cov_68.792899_g69205_i0reverse_frame_1 - 0.021 13.7 0.1 0.021 13.7 0.1 1.0 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) IQ PF00612.27 NODE_77142_length_204_cov_72.698225_g69201_i0forward_frame_1 - 0.034 13.9 0.5 0.059 13.2 0.5 1.4 1 0 0 1 1 1 0 IQ calmodulin-binding motif Lipocalin_8 PF16585.5 NODE_77131_length_204_cov_100.668639_g69190_i0reverse_frame_1 - 0.01 16.3 0.4 0.012 16.1 0.4 1.1 1 0 0 1 1 1 0 Lipocalin-like domain DUF1749 PF08538.10 NODE_77126_length_204_cov_140.130178_g69185_i0reverse_frame_1 - 0.11 11.6 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1749) FAM199X PF15814.5 NODE_77124_length_204_cov_156.189349_g69183_i0forward_frame_1 - 5.2 6.0 7.5 5.4 6.0 7.5 1.0 1 0 0 1 1 1 0 Protein family FAM199X X PF00739.19 NODE_77122_length_204_cov_176.331361_g69181_i0reverse_frame_1 - 0.074 13.2 0.1 0.087 13.0 0.1 1.1 1 0 0 1 1 1 0 Trans-activation protein X DUF758 PF05527.11 NODE_77119_length_204_cov_272.715976_g69178_i0forward_frame_1 - 0.033 14.2 0.1 0.036 14.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF758) DUF1989 PF09347.10 NODE_77115_length_204_cov_798.988166_g69174_i0forward_frame_1 - 0.12 12.1 0.1 0.14 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) Lamprin PF06403.11 NODE_77106_length_205_cov_0.911765_g69165_i0reverse_frame_2 - 0.034 14.1 0.8 0.037 14.0 0.8 1.1 1 0 0 1 1 1 0 Lamprin Chorion_1 PF01723.16 NODE_77106_length_205_cov_0.911765_g69165_i0reverse_frame_2 - 0.091 12.7 1.4 0.099 12.6 1.4 1.0 1 0 0 1 1 1 0 Chorion protein SLBP_RNA_bind PF15247.6 NODE_77101_length_205_cov_0.935294_g69160_i0reverse_frame_3 - 0.019 15.1 1.9 0.024 14.8 1.9 1.3 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain APG6_N PF17675.1 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_3 - 0.017 15.7 2.8 0.018 15.5 2.8 1.0 1 0 0 1 1 1 0 Apg6 coiled-coil region CENP-H PF05837.12 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_3 - 0.021 15.2 0.4 0.022 15.1 0.4 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) POM121 PF15229.6 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_3 - 0.15 11.7 2.0 0.23 11.1 0.7 1.8 2 0 0 2 2 2 0 POM121 family ACTH_assoc PF16102.5 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_3 - 0.18 12.6 0.6 0.18 12.6 0.6 2.0 1 1 1 2 2 2 0 ACTH-associated domain DUF2102 PF09875.9 NODE_77098_length_205_cov_0.935294_g69157_i0reverse_frame_3 - 0.018 14.7 0.8 0.02 14.6 0.8 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) Phage_Gp23 PF10669.9 NODE_77098_length_205_cov_0.935294_g69157_i0reverse_frame_3 - 0.045 14.1 0.3 0.051 13.9 0.3 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) SAP130_C PF16014.5 NODE_77097_length_205_cov_0.935294_g69156_i0forward_frame_2 - 0.038 13.1 0.3 0.04 13.0 0.3 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus DUF3098 PF11297.8 NODE_77088_length_205_cov_0.941176_g69147_i0forward_frame_2 - 0.071 12.7 0.7 0.1 12.2 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3098) Excalibur PF05901.11 NODE_77086_length_205_cov_0.941176_g69145_i0forward_frame_2 - 0.19 12.4 1.2 4.3 8.0 1.2 2.1 1 1 0 1 1 1 0 Excalibur calcium-binding domain CitMHS PF03600.16 NODE_77084_length_205_cov_0.941176_g69143_i0reverse_frame_3 - 0.012 14.9 4.3 0.012 14.9 4.3 1.0 1 0 0 1 1 1 0 Citrate transporter Myotub-related PF06602.14 NODE_77078_length_205_cov_0.941176_g69137_i0forward_frame_3 - 0.13 11.2 0.0 0.15 11.0 0.0 1.0 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain DUF3925 PF13063.6 NODE_77077_length_205_cov_0.941176_g69136_i0reverse_frame_2 - 0.052 13.8 0.4 0.063 13.5 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3925) YdaS_antitoxin PF15943.5 NODE_77077_length_205_cov_0.941176_g69136_i0forward_frame_3 - 0.093 12.6 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DUF4042 PF13251.6 NODE_77077_length_205_cov_0.941176_g69136_i0forward_frame_2 - 0.028 14.1 0.3 0.029 14.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) Rod_C PF10493.9 NODE_77075_length_205_cov_0.941176_g69134_i0forward_frame_3 - 0.17 10.2 0.3 0.19 10.1 0.3 1.0 1 0 0 1 1 1 0 Rough deal protein C-terminal region K_channel_TID PF07941.11 NODE_77073_length_205_cov_0.941176_g69132_i0reverse_frame_2 - 0.048 14.1 3.3 0.07 13.6 3.3 1.2 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain NPCC PF08058.11 NODE_77069_length_205_cov_1.000000_g69128_i0forward_frame_3 - 0.054 13.6 0.7 0.067 13.2 0.7 1.1 1 0 0 1 1 1 0 Nuclear pore complex component GWT1 PF06423.12 NODE_77069_length_205_cov_1.000000_g69128_i0forward_frame_3 - 0.063 13.4 0.9 0.063 13.4 0.9 1.1 1 0 0 1 1 1 0 GWT1 CbtA PF09490.10 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_3 - 7.7 6.2 6.1 8 6.2 6.1 1.1 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtA) SR-25 PF10500.9 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_2 - 2.1 7.9 11.9 2.1 7.9 11.9 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CCDC24 PF15669.5 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_2 - 3.9 7.3 5.0 4.1 7.2 5.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family DUF1676 PF07898.13 NODE_77063_length_205_cov_1.035294_g69122_i0forward_frame_3 - 1.7 8.6 9.3 1.7 8.6 9.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) NOA36 PF06524.12 NODE_77063_length_205_cov_1.035294_g69122_i0forward_frame_2 - 0.22 10.8 9.1 0.21 10.8 9.1 1.1 1 0 0 1 1 1 0 NOA36 protein Herpes_LMP1 PF05297.11 NODE_77046_length_205_cov_1.158824_g69105_i0forward_frame_3 - 1.8 7.7 4.8 1.7 7.7 4.8 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Lamprin PF06403.11 NODE_77045_length_205_cov_1.164706_g69104_i0forward_frame_2 - 0.19 11.7 1.6 0.23 11.4 1.6 1.1 1 0 0 1 1 1 0 Lamprin zf-RING_7 PF02591.15 NODE_77039_length_205_cov_1.176471_g69098_i0forward_frame_3 - 0.046 13.9 0.6 0.19 11.9 0.4 1.9 2 0 0 2 2 2 0 C4-type zinc ribbon domain E1-E2_ATPase PF00122.20 NODE_77039_length_205_cov_1.176471_g69098_i0forward_frame_2 - 0.00057 19.5 6.2 0.00065 19.3 6.2 1.1 1 0 0 1 1 1 1 E1-E2 ATPase DUF4974 PF16344.5 NODE_77023_length_205_cov_1.305882_g69082_i0reverse_frame_3 - 0.054 13.5 0.1 0.068 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4974) Pkinase PF00069.25 NODE_77023_length_205_cov_1.305882_g69082_i0reverse_frame_2 - 1.9e-05 24.2 0.0 2e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain CtsR PF05848.11 NODE_77023_length_205_cov_1.305882_g69082_i0reverse_frame_2 - 0.096 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 CtsR N-terminal HTH domain Nrap_D4 PF17405.2 NODE_77022_length_205_cov_1.305882_g69081_i0reverse_frame_3 - 0.091 12.1 0.0 0.098 12.0 0.0 1.0 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 DUF2238 PF09997.9 NODE_77016_length_205_cov_1.335294_g69075_i0forward_frame_2 - 0.2 11.4 0.0 0.24 11.2 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2238) YacG PF03884.14 NODE_77015_length_205_cov_1.335294_g69074_i0reverse_frame_2 - 0.15 11.8 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG Cu2_monooxygen PF01082.20 NODE_77015_length_205_cov_1.335294_g69074_i0forward_frame_2 - 0.042 14.1 0.1 0.046 13.9 0.1 1.0 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain AKAP7_NLS PF10469.9 NODE_77014_length_205_cov_1.341176_g69073_i0reverse_frame_2 - 0.00044 20.2 0.1 0.00051 20.0 0.1 1.0 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain RE_SinI PF09570.10 NODE_77007_length_205_cov_1.376471_g69066_i0forward_frame_3 - 0.2 10.9 0.0 0.21 10.8 0.0 1.1 1 0 0 1 1 1 0 SinI restriction endonuclease FGFR3_TM PF18123.1 NODE_77006_length_205_cov_1.382353_g69065_i0reverse_frame_3 - 0.46 10.0 3.2 0.65 9.6 3.2 1.2 1 0 0 1 1 1 0 Fibroblast growth factor receptor 3 transmembrane domain zf-TRAF PF02176.18 NODE_77004_length_205_cov_1.394118_g69063_i0reverse_frame_2 - 4e-10 40.2 2.3 1e-09 38.9 2.2 1.6 1 1 0 1 1 1 1 TRAF-type zinc finger Sina PF03145.16 NODE_77004_length_205_cov_1.394118_g69063_i0reverse_frame_2 - 0.027 14.4 2.2 2.4 8.1 0.1 2.0 1 1 1 2 2 2 0 Seven in absentia protein family zf-TRAF_2 PF15965.5 NODE_77004_length_205_cov_1.394118_g69063_i0reverse_frame_2 - 0.037 14.5 1.3 2 8.9 0.3 2.0 1 1 1 2 2 2 0 TRAF-like zinc-finger Baculo_Y142 PF04913.12 NODE_77004_length_205_cov_1.394118_g69063_i0forward_frame_3 - 0.073 11.7 0.0 0.074 11.7 0.0 1.0 1 0 0 1 1 1 0 Baculovirus Y142 protein Sulfatase PF00884.23 NODE_76998_length_205_cov_1.400000_g69057_i0forward_frame_3 - 0.15 11.4 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Sulfatase RecR PF02132.15 NODE_76997_length_205_cov_1.400000_g69056_i0reverse_frame_3 - 0.39 10.3 4.0 9.1 5.9 4.0 2.1 1 1 0 1 1 1 0 RecR protein BaffR-Tall_bind PF09256.10 NODE_76992_length_205_cov_1.405882_g69051_i0forward_frame_3 - 0.014 15.2 0.9 0.036 13.8 0.9 1.7 1 0 0 1 1 1 0 BAFF-R, TALL-1 binding FERM_N PF09379.10 NODE_76977_length_205_cov_1.411765_g69036_i0reverse_frame_3 - 0.085 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 FERM N-terminal domain MatE PF01554.18 NODE_76977_length_205_cov_1.411765_g69036_i0forward_frame_2 - 1.7e-09 37.6 0.5 1.8e-09 37.5 0.5 1.0 1 0 0 1 1 1 1 MatE DUF2798 PF11391.8 NODE_76970_length_205_cov_1.429412_g69029_i0reverse_frame_2 - 0.015 15.3 1.9 0.02 14.9 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2798) DUF5387 PF17361.2 NODE_76970_length_205_cov_1.429412_g69029_i0forward_frame_2 - 0.024 14.3 0.1 0.025 14.3 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5387) RELT PF12606.8 NODE_76968_length_205_cov_1.458824_g69027_i0reverse_frame_2 - 0.025 13.6 0.1 0.039 12.9 0.1 1.2 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 DUF3636 PF12331.8 NODE_76968_length_205_cov_1.458824_g69027_i0reverse_frame_2 - 0.064 13.1 0.0 0.064 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3636) DUF2300 PF10062.9 NODE_76968_length_205_cov_1.458824_g69027_i0forward_frame_3 - 0.014 15.5 4.6 0.016 15.3 4.6 1.0 1 0 0 1 1 1 0 Predicted secreted protein (DUF2300) Cortexin PF11057.8 NODE_76966_length_205_cov_1.470588_g69025_i0forward_frame_3 - 0.22 11.4 1.7 0.26 11.2 1.7 1.2 1 0 0 1 1 1 0 Cortexin of kidney DUF179 PF02622.15 NODE_76965_length_205_cov_1.470588_g69024_i0reverse_frame_3 - 8e-07 29.1 0.0 8.5e-07 29.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 R3H PF01424.22 NODE_76956_length_205_cov_1.511765_g69015_i0reverse_frame_2 - 0.0017 18.3 0.2 0.0022 18.0 0.2 1.3 1 1 0 1 1 1 1 R3H domain Herpes_UL46 PF03387.14 NODE_76956_length_205_cov_1.511765_g69015_i0forward_frame_3 - 0.0012 17.7 0.7 0.0014 17.5 0.7 1.0 1 0 0 1 1 1 1 Herpesvirus UL46 protein Protein_K PF12283.8 NODE_76950_length_205_cov_1.541176_g69009_i0reverse_frame_2 - 0.018 15.2 0.1 0.042 14.1 0.1 1.6 1 1 1 2 2 2 0 Bacteriophage protein K DUF1601 PF07671.11 NODE_76938_length_205_cov_1.594118_g68997_i0forward_frame_2 - 0.16 11.9 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1601) DUF2401 PF10287.9 NODE_76936_length_205_cov_1.600000_g68995_i0reverse_frame_2 - 0.08 12.5 0.1 0.086 12.4 0.1 1.1 1 0 0 1 1 1 0 Putative TOS1-like glycosyl hydrolase (DUF2401) Corona_NS3b PF03053.14 NODE_76931_length_205_cov_1.647059_g68990_i0reverse_frame_2 - 0.16 11.7 2.1 0.16 11.7 2.1 1.0 1 0 0 1 1 1 0 ORF3b coronavirus protein AIM3 PF17096.5 NODE_76930_length_205_cov_1.676471_g68989_i0reverse_frame_2 - 0.042 14.8 1.3 0.05 14.6 1.3 1.2 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 RVT_2 PF07727.14 NODE_76929_length_205_cov_1.711765_g68988_i0reverse_frame_3 - 2.2e-05 24.2 0.0 2.6e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) TPR_7 PF13176.6 NODE_76926_length_205_cov_1.717647_g68985_i0forward_frame_2 - 0.015 15.3 0.3 0.094 12.8 0.1 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_76926_length_205_cov_1.717647_g68985_i0forward_frame_2 - 0.021 14.7 0.4 0.035 14.0 0.4 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat RPN7 PF10602.9 NODE_76926_length_205_cov_1.717647_g68985_i0forward_frame_2 - 0.066 12.9 0.1 0.079 12.7 0.1 1.1 1 0 0 1 1 1 0 26S proteasome subunit RPN7 FAP206 PF12018.8 NODE_76919_length_205_cov_1.794118_g68978_i0reverse_frame_3 - 0.0067 16.0 0.2 0.02 14.4 0.0 1.7 1 1 1 2 2 2 1 Domain of unknown function IGF2_C PF08365.11 NODE_76919_length_205_cov_1.794118_g68978_i0reverse_frame_2 - 0.0069 16.4 1.4 0.0087 16.1 1.4 1.2 1 0 0 1 1 1 1 Insulin-like growth factor II E-peptide PPV_E1_N PF00524.18 NODE_76917_length_205_cov_1.805882_g68976_i0reverse_frame_2 - 0.13 12.7 0.0 0.14 12.6 0.0 1.0 1 0 0 1 1 1 0 E1 Protein, N terminal domain C_Hendra PF16821.5 NODE_76913_length_205_cov_1.823529_g68972_i0reverse_frame_2 - 0.0086 16.0 0.7 0.0094 15.8 0.7 1.1 1 0 0 1 1 1 1 C protein from hendra and measles viruses Imp-YgjV PF10688.9 NODE_76905_length_205_cov_1.900000_g68964_i0forward_frame_3 - 0.053 13.3 1.1 0.058 13.2 1.1 1.0 1 0 0 1 1 1 0 Bacterial inner membrane protein Ycf70 PF17382.2 NODE_76902_length_205_cov_1.947059_g68961_i0forward_frame_2 - 1.5 9.3 3.3 0.64 10.4 0.5 1.7 1 1 1 2 2 2 0 Uncharacterized Ycf70-like CLASP_N PF12348.8 NODE_76901_length_205_cov_1.947059_g68960_i0reverse_frame_2 - 2.6e-06 27.2 0.3 2.6e-06 27.2 0.3 1.1 1 0 0 1 1 1 1 CLASP N terminal ApoLp-III PF07464.11 NODE_76901_length_205_cov_1.947059_g68960_i0reverse_frame_2 - 0.058 13.5 0.0 0.062 13.4 0.0 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) RTP1_C1 PF10363.9 NODE_76901_length_205_cov_1.947059_g68960_i0reverse_frame_2 - 0.067 13.4 0.2 0.074 13.2 0.2 1.1 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 Ezh2_MCSS PF18600.1 NODE_76899_length_205_cov_1.976471_g68958_i0reverse_frame_2 - 0.038 13.6 0.1 0.057 13.0 0.1 1.3 1 0 0 1 1 1 0 MCSS domain DUF4478 PF14793.6 NODE_76899_length_205_cov_1.976471_g68958_i0forward_frame_3 - 0.076 12.9 0.0 0.091 12.6 0.0 1.1 1 0 0 1 1 1 0 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Pkinase PF00069.25 NODE_76889_length_205_cov_2.094118_g68948_i0forward_frame_2 - 0.018 14.4 0.1 0.018 14.4 0.1 1.3 1 1 0 1 1 1 0 Protein kinase domain PGG PF13962.6 NODE_76882_length_205_cov_2.170588_g68941_i0reverse_frame_3 - 0.012 15.4 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function COQ9 PF08511.11 NODE_76882_length_205_cov_2.170588_g68941_i0reverse_frame_3 - 0.082 12.7 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 COQ9 Orf78 PF06024.12 NODE_76882_length_205_cov_2.170588_g68941_i0reverse_frame_3 - 0.082 13.2 0.3 0.088 13.1 0.3 1.1 1 0 0 1 1 1 0 Orf78 (ac78) DUF4326 PF14216.6 NODE_76881_length_205_cov_2.188235_g68940_i0forward_frame_3 - 0.00017 22.3 0.0 0.00019 22.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4326) Cytochrome_CBB3 PF13442.6 NODE_76881_length_205_cov_2.188235_g68940_i0forward_frame_2 - 5.3 7.4 5.5 1.3 9.4 1.7 1.8 1 1 1 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III DsbD PF02683.15 NODE_76880_length_205_cov_2.211765_g68939_i0forward_frame_2 - 0.038 13.9 0.2 0.042 13.7 0.2 1.0 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region Herpeto_peptide PF14409.6 NODE_76879_length_205_cov_2.229412_g68938_i0forward_frame_2 - 0.1 12.9 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Ribosomally synthesized peptide in Herpetosiphon Bac_chlorC PF02043.17 NODE_76874_length_205_cov_2.347059_g68933_i0reverse_frame_3 - 0.0041 17.1 0.4 0.0051 16.8 0.4 1.1 1 0 0 1 1 1 1 Bacteriochlorophyll C binding protein RBP_receptor PF14752.6 NODE_76874_length_205_cov_2.347059_g68933_i0forward_frame_2 - 0.15 10.6 0.1 0.17 10.4 0.1 1.0 1 0 0 1 1 1 0 Retinol binding protein receptor DUF4859 PF16151.5 NODE_76872_length_205_cov_2.411765_g68931_i0forward_frame_2 - 0.029 14.3 0.1 0.032 14.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4859) DUF3399 PF11879.8 NODE_76871_length_205_cov_2.417647_g68930_i0forward_frame_3 - 0.5 10.7 3.8 0.68 10.3 3.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) TERF2_RBM PF16772.5 NODE_76871_length_205_cov_2.417647_g68930_i0forward_frame_2 - 0.15 11.5 0.0 0.29 10.6 0.0 1.5 1 0 0 1 1 1 0 Telomeric repeat-binding factor 2 Rap1-binding motif S1_2 PF13509.6 NODE_76867_length_205_cov_2.511765_g68926_i0reverse_frame_2 - 0.049 13.7 0.0 0.072 13.2 0.0 1.3 1 0 0 1 1 1 0 S1 domain WAK PF08488.11 NODE_76864_length_205_cov_2.576471_g68923_i0forward_frame_2 - 0.029 14.9 0.2 0.049 14.2 0.0 1.5 1 1 1 2 2 2 0 Wall-associated kinase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks362.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks362.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks362.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks362.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF229 PF02995.17 NODE_76861_length_205_cov_2.641176_g68920_i0reverse_frame_3 - 0.027 13.1 0.2 0.029 13.0 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF229) LRR_6 PF13516.6 NODE_76861_length_205_cov_2.641176_g68920_i0reverse_frame_3 - 0.042 13.9 0.8 7.7 6.9 0.3 2.7 3 0 0 3 3 3 0 Leucine Rich repeat zf-CpG_bind_C PF12269.8 NODE_76861_length_205_cov_2.641176_g68920_i0reverse_frame_3 - 0.049 13.4 0.1 0.058 13.2 0.1 1.1 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain DUF1951 PF09188.10 NODE_76861_length_205_cov_2.641176_g68920_i0forward_frame_3 - 0.051 13.5 0.3 0.11 12.4 0.2 1.5 1 1 0 2 2 2 0 Domain of unknown function (DUF1951) Ral PF11058.8 NODE_76861_length_205_cov_2.641176_g68920_i0forward_frame_2 - 3.6 7.2 5.5 2.5 7.8 0.1 2.0 1 1 1 2 2 2 0 Antirestriction protein Ral ATE_N PF04376.13 NODE_76859_length_205_cov_2.752941_g68918_i0reverse_frame_2 - 0.077 13.4 0.1 0.081 13.3 0.1 1.3 1 1 0 1 1 1 0 Arginine-tRNA-protein transferase, N terminus Sec62 PF03839.16 NODE_76858_length_205_cov_2.835294_g68917_i0forward_frame_2 - 1.3e-05 24.8 0.2 1.3e-05 24.8 0.2 1.1 1 0 0 1 1 1 1 Translocation protein Sec62 DUF4577 PF15145.6 NODE_76855_length_205_cov_2.858824_g68914_i0forward_frame_3 - 0.0068 16.4 0.2 0.0085 16.1 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4577) Nsp1_C PF05064.13 NODE_76855_length_205_cov_2.858824_g68914_i0forward_frame_3 - 0.055 13.3 0.0 0.055 13.3 0.0 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region RNase_PH PF01138.21 NODE_76854_length_205_cov_2.935294_g68913_i0forward_frame_2 - 0.027 15.0 0.0 0.033 14.7 0.0 1.1 1 0 0 1 1 1 0 3' exoribonuclease family, domain 1 DUF4099 PF13351.6 NODE_76852_length_205_cov_3.052941_g68911_i0forward_frame_3 - 0.15 12.3 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4099) DUF4658 PF15555.6 NODE_76850_length_205_cov_3.082353_g68909_i0forward_frame_3 - 0.057 13.5 1.0 0.062 13.4 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) Sec15 PF04091.12 NODE_76847_length_205_cov_3.247059_g68906_i0forward_frame_3 - 0.054 12.9 0.6 0.057 12.8 0.6 1.0 1 0 0 1 1 1 0 Exocyst complex subunit Sec15-like UPF0181 PF03701.14 NODE_76846_length_205_cov_3.547059_g68905_i0reverse_frame_2 - 0.04 13.5 0.4 0.07 12.8 0.4 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0181) H2O2_YaaD PF03883.14 NODE_76845_length_205_cov_3.552941_g68904_i0forward_frame_3 - 0.093 12.2 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Peroxide stress protein YaaA Glyco_transf_20 PF00982.21 NODE_76844_length_205_cov_3.605882_g68903_i0reverse_frame_3 - 0.086 11.5 0.5 0.087 11.5 0.5 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 PI_PP_I PF18363.1 NODE_76842_length_205_cov_4.541176_g68901_i0forward_frame_2 - 0.062 13.5 0.1 0.067 13.4 0.1 1.0 1 0 0 1 1 1 0 Phosphoinositide phosphatase insertion domain BESS PF02944.20 NODE_76841_length_205_cov_4.670588_g68900_i0reverse_frame_2 - 0.19 11.6 3.9 1.3 8.9 0.8 2.2 2 0 0 2 2 2 0 BESS motif SKN1 PF03935.15 NODE_76839_length_205_cov_12.329412_g68898_i0forward_frame_2 - 0.38 9.1 2.2 0.38 9.1 2.2 1.0 1 0 0 1 1 1 0 Beta-glucan synthesis-associated protein (SKN1) AID PF18767.1 NODE_76836_length_205_cov_14.376471_g68895_i0forward_frame_2 - 0.034 14.2 0.1 0.041 13.9 0.1 1.1 1 0 0 1 1 1 0 Activation induced deaminase Cadherin_tail PF15974.5 NODE_76833_length_205_cov_23.247059_g68892_i0reverse_frame_2 - 0.0048 17.2 2.0 0.005 17.2 2.0 1.0 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region Mei5 PF10376.9 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.00072 19.5 13.0 0.00082 19.3 13.0 1.0 1 0 0 1 1 1 1 Double-strand recombination repair protein APG6_N PF17675.1 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.041 14.4 15.5 0.047 14.2 15.5 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Ax_dynein_light PF10211.9 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.056 13.4 14.1 0.059 13.3 14.1 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain DPM3 PF08285.11 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.19 11.9 0.5 0.23 11.7 0.5 1.3 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Herpes_UL6 PF01763.16 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.32 9.5 8.0 0.34 9.4 8.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like FlxA PF14282.6 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.41 10.7 14.1 0.52 10.3 11.1 1.9 1 1 1 2 2 2 0 FlxA-like protein CCDC-167 PF15188.6 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.47 10.8 14.1 0.76 10.2 14.1 1.4 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 MctB PF11382.8 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.94 9.1 3.9 1 9.0 3.9 1.1 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB Spc24 PF08286.11 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.94 9.7 10.2 1 9.6 10.2 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF4407 PF14362.6 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 1.7 7.9 7.8 1.8 7.9 7.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4140 PF13600.6 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 3.1 8.3 7.6 5 7.6 7.6 1.5 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) TMPIT PF07851.13 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 7.3 5.7 11.0 7.4 5.7 11.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein TSLP PF15216.6 NODE_76831_length_205_cov_25.458824_g68890_i0forward_frame_2 - 0.074 13.3 0.0 0.074 13.3 0.0 1.1 1 0 0 1 1 1 0 Thymic stromal lymphopoietin Adeno_GP19K PF04881.13 NODE_76829_length_205_cov_30.694118_g68888_i0forward_frame_2 - 0.092 12.7 2.1 0.1 12.6 2.1 1.1 1 0 0 1 1 1 0 Adenovirus GP19K FeoB_Cyto PF17910.1 NODE_76822_length_205_cov_37.211765_g68881_i0reverse_frame_3 - 0.025 15.1 0.1 0.029 14.9 0.1 1.1 1 0 0 1 1 1 0 FeoB cytosolic helical domain T3SS_ATPase_C PF18269.1 NODE_76818_length_205_cov_39.058824_g68877_i0forward_frame_2 - 0.06 13.2 0.0 0.074 12.9 0.0 1.1 1 0 0 1 1 1 0 T3SS EscN ATPase C-terminal domain MORN PF02493.20 NODE_76816_length_205_cov_42.341176_g68875_i0reverse_frame_2 - 4.7e-06 26.2 1.4 8.4e-06 25.4 1.4 1.5 1 0 0 1 1 1 1 MORN repeat DegT_DnrJ_EryC1 PF01041.17 NODE_76815_length_205_cov_42.888235_g68874_i0reverse_frame_2 - 1.2e-05 24.8 0.0 1.4e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family MelC1 PF06236.11 NODE_76814_length_205_cov_43.147059_g68873_i0forward_frame_2 - 0.079 13.0 0.0 0.1 12.7 0.0 1.3 1 1 0 1 1 1 0 Tyrosinase co-factor MelC1 DUF2162 PF09930.9 NODE_76814_length_205_cov_43.147059_g68873_i0forward_frame_2 - 0.24 10.8 0.1 0.28 10.6 0.1 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) MNNL PF07657.13 NODE_76806_length_205_cov_50.076471_g68865_i0reverse_frame_2 - 0.037 14.1 0.2 0.043 13.8 0.2 1.2 1 0 0 1 1 1 0 N terminus of Notch ligand DUF2199 PF09965.9 NODE_76806_length_205_cov_50.076471_g68865_i0forward_frame_2 - 0.25 11.4 0.5 0.31 11.1 0.5 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2199) SH2 PF00017.24 NODE_76805_length_205_cov_50.088235_g68864_i0reverse_frame_2 - 0.097 12.8 0.1 0.17 12.0 0.0 1.5 1 1 1 2 2 2 0 SH2 domain DUF4603 PF15376.6 NODE_76799_length_205_cov_56.500000_g68858_i0forward_frame_3 - 0.11 9.9 1.8 0.12 9.8 1.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) DUF1478 PF07349.11 NODE_76798_length_205_cov_58.411765_g68857_i0forward_frame_2 - 0.012 15.6 0.1 0.013 15.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1478) Herpes_U5 PF05999.11 NODE_76795_length_205_cov_68.500000_g68854_i0reverse_frame_3 - 0.12 11.2 0.2 0.13 10.9 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus U5-like family COX5B PF01215.19 NODE_76795_length_205_cov_68.500000_g68854_i0reverse_frame_2 - 0.031 14.0 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb DHODB_Fe-S_bind PF10418.9 NODE_76790_length_205_cov_73.747059_g68849_i0forward_frame_2 - 0.047 13.5 0.0 0.069 13.0 0.0 1.3 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ETRAMP PF09716.10 NODE_76788_length_205_cov_90.223529_g68847_i0forward_frame_2 - 5.4 7.1 7.0 5.8 7.0 7.0 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Coilin_N PF15862.5 NODE_76788_length_205_cov_90.223529_g68847_i0forward_frame_2 - 9.2 6.1 13.5 11 5.9 13.5 1.1 1 0 0 1 1 1 0 Coilin N-terminus Cullin_Nedd8 PF10557.9 NODE_76785_length_205_cov_92.770588_g68844_i0reverse_frame_2 - 8.8e-07 28.9 0.1 8.8e-07 28.9 0.1 2.0 2 0 0 2 2 2 1 Cullin protein neddylation domain DUF2201_N PF13203.6 NODE_76785_length_205_cov_92.770588_g68844_i0reverse_frame_2 - 0.013 15.1 0.0 0.013 15.1 0.0 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain zf-RING_6 PF14835.6 NODE_76784_length_205_cov_95.964706_g68843_i0forward_frame_2 - 0.064 13.1 0.9 0.12 12.3 0.1 1.7 1 1 1 2 2 2 0 zf-RING of BARD1-type protein PcrB PF01884.17 NODE_76784_length_205_cov_95.964706_g68843_i0forward_frame_2 - 0.096 12.1 0.0 0.096 12.1 0.0 1.0 1 0 0 1 1 1 0 PcrB family DUF2254 PF10011.9 NODE_76776_length_205_cov_144.376471_g68835_i0forward_frame_3 - 4 6.1 7.2 4.4 6.0 7.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Lamprin PF06403.11 NODE_76768_length_205_cov_228.005882_g68827_i0forward_frame_2 - 5 7.1 15.8 12 5.9 15.8 1.7 1 1 0 1 1 1 0 Lamprin SWIRM-assoc_2 PF16496.5 NODE_76766_length_205_cov_246.941176_g68825_i0forward_frame_2 - 0.39 9.5 4.4 0.36 9.7 4.4 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal FixH PF05751.11 NODE_76765_length_205_cov_250.147059_g68824_i0reverse_frame_2 - 0.33 10.9 5.4 0.41 10.6 5.4 1.1 1 0 0 1 1 1 0 FixH DUF2600 PF10776.9 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_3 - 0.0021 17.0 0.8 0.0024 16.8 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2600) Ku_C PF03730.14 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_3 - 0.12 13.1 2.8 0.16 12.7 2.8 1.1 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm AP3D1 PF06375.11 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_2 - 0.26 11.5 11.6 0.27 11.5 11.6 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Peptidase_S49_N PF08496.10 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_2 - 4 7.5 10.4 4.2 7.4 10.4 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Glyco_transf_20 PF00982.21 NODE_76764_length_205_cov_276.311765_g68823_i0reverse_frame_3 - 0.085 11.5 0.0 5.4 5.6 0.0 2.0 2 0 0 2 2 2 0 Glycosyltransferase family 20 GET2 PF08690.10 NODE_76763_length_205_cov_315.900000_g68822_i0reverse_frame_3 - 0.059 13.1 0.6 0.064 12.9 0.6 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 FUSC-like PF12805.7 NODE_76763_length_205_cov_315.900000_g68822_i0reverse_frame_3 - 0.21 10.6 0.5 0.25 10.4 0.5 1.0 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS DUF5480 PF17576.2 NODE_76758_length_206_cov_0.783626_g68817_i0reverse_frame_3 - 0.07 13.1 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5480) RGP PF03214.13 NODE_76754_length_206_cov_0.865497_g68813_i0reverse_frame_3 - 0.11 11.7 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Reversibly glycosylated polypeptide AHJR-like PF18743.1 NODE_76751_length_206_cov_0.929825_g68810_i0reverse_frame_3 - 0.038 13.5 0.1 0.042 13.4 0.1 1.1 1 0 0 1 1 1 0 REase_AHJR-like DUF1035 PF06281.12 NODE_76751_length_206_cov_0.929825_g68810_i0forward_frame_3 - 0.068 13.2 0.0 0.07 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1035) zf-MIZ PF02891.20 NODE_76746_length_206_cov_0.929825_g68805_i0reverse_frame_2 - 0.045 13.5 0.1 0.056 13.2 0.1 1.3 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger ANP PF00212.18 NODE_76744_length_206_cov_0.935673_g68803_i0forward_frame_3 - 0.037 14.2 0.3 0.037 14.2 0.3 2.2 3 0 0 3 3 3 0 Atrial natriuretic peptide DUF2564 PF10819.8 NODE_76740_length_206_cov_0.935673_g68799_i0reverse_frame_3 - 0.14 12.6 0.1 0.21 12.0 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2564) DUF2576 PF10845.8 NODE_76737_length_206_cov_0.935673_g68796_i0reverse_frame_3 - 0.038 13.6 0.0 0.048 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) TMEM108 PF15759.5 NODE_76734_length_206_cov_0.935673_g68793_i0reverse_frame_3 - 0.35 9.8 3.3 0.37 9.8 3.3 1.0 1 0 0 1 1 1 0 TMEM108 family DpnI_C PF17726.1 NODE_76727_length_206_cov_0.964912_g68786_i0reverse_frame_2 - 0.042 14.0 0.7 0.063 13.4 0.6 1.5 1 1 0 1 1 1 0 Dam-replacing HTH domain zinc_ribbon_12 PF11331.8 NODE_76726_length_206_cov_0.964912_g68785_i0reverse_frame_2 - 0.0038 17.0 0.3 0.0053 16.5 0.3 1.3 1 0 0 1 1 1 1 Probable zinc-ribbon domain DUF5402 PF17393.2 NODE_76725_length_206_cov_0.976608_g68784_i0reverse_frame_2 - 0.14 12.1 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5402) Peptidase_C9 PF01707.16 NODE_76723_length_206_cov_0.976608_g68782_i0reverse_frame_3 - 0.01 15.4 0.0 0.01 15.4 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C9 HLH PF00010.26 NODE_76718_length_206_cov_1.011696_g68777_i0reverse_frame_3 - 0.06 13.3 0.9 0.091 12.7 0.9 1.2 1 0 0 1 1 1 0 Helix-loop-helix DNA-binding domain Sporozoite_P67 PF05642.11 NODE_76714_length_206_cov_1.035088_g68773_i0reverse_frame_2 - 7.4 4.5 9.0 7.6 4.5 9.0 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen IR1-M PF12185.8 NODE_76711_length_206_cov_1.052632_g68770_i0forward_frame_3 - 0.047 13.6 0.0 0.064 13.2 0.0 1.3 1 0 0 1 1 1 0 Nup358/RanBP2 E3 ligase domain Cu_bind_like PF02298.17 NODE_76710_length_206_cov_1.058480_g68769_i0forward_frame_2 - 0.12 12.4 0.1 0.13 12.3 0.1 1.3 1 1 0 1 1 1 0 Plastocyanin-like domain Methyltransf_13 PF08421.11 NODE_76705_length_206_cov_1.076023_g68764_i0reverse_frame_3 - 0.12 12.7 7.3 1.6 9.1 0.4 2.2 1 1 1 2 2 2 0 Putative zinc binding domain NDUF_B12 PF08122.12 NODE_76703_length_206_cov_1.076023_g68762_i0reverse_frame_2 - 0.0066 16.5 0.3 0.0076 16.3 0.3 1.2 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase B12 subunit family Glu_syn_central PF04898.14 NODE_76700_length_206_cov_1.087719_g68759_i0forward_frame_2 - 5.2e-05 22.9 0.0 5.5e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 Glutamate synthase central domain PelG PF16933.5 NODE_76700_length_206_cov_1.087719_g68759_i0forward_frame_2 - 0.053 12.4 0.0 0.056 12.3 0.0 1.0 1 0 0 1 1 1 0 Putative exopolysaccharide Exporter (EPS-E) Lact-deh-memb PF09330.11 NODE_76699_length_206_cov_1.087719_g68758_i0forward_frame_2 - 0.0018 17.7 2.1 0.0019 17.6 2.1 1.0 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding DUF2749 PF10907.8 NODE_76691_length_206_cov_1.122807_g68750_i0forward_frame_3 - 0.023 14.8 0.0 0.028 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) AAA_lid_7 PF17867.1 NODE_76689_length_206_cov_1.122807_g68748_i0forward_frame_2 - 9.8e-08 32.2 0.0 1e-07 32.1 0.0 1.1 1 0 0 1 1 1 1 Midasin AAA lid domain Pyridoxal_deC PF00282.19 NODE_76688_length_206_cov_1.152047_g68747_i0forward_frame_2 - 0.0019 17.0 0.0 0.0019 17.0 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain RBDV_coat PF06593.11 NODE_76680_length_206_cov_1.169591_g68739_i0reverse_frame_2 - 0.16 11.4 0.3 0.16 11.4 0.3 1.0 1 0 0 1 1 1 0 Raspberry bushy dwarf virus coat protein BMF PF15185.6 NODE_76678_length_206_cov_1.192982_g68737_i0reverse_frame_2 - 0.094 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis DUF1964 PF09244.10 NODE_76677_length_206_cov_1.192982_g68736_i0forward_frame_3 - 0.098 13.1 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1964) tRNA_anti-codon PF01336.25 NODE_76676_length_206_cov_1.204678_g68735_i0forward_frame_2 - 0.00012 22.0 0.4 0.00014 21.8 0.4 1.0 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain HTH_44 PF14641.6 NODE_76675_length_206_cov_1.204678_g68734_i0reverse_frame_3 - 0.078 13.4 0.1 0.094 13.2 0.1 1.1 1 0 0 1 1 1 0 Helix-turn-helix DNA-binding domain of SPT6 GST_C_6 PF17171.4 NODE_76671_length_206_cov_1.204678_g68730_i0reverse_frame_2 - 0.00095 18.9 0.0 0.0012 18.6 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain UCR_Fe-S_N PF10399.9 NODE_76662_length_206_cov_1.269006_g68721_i0reverse_frame_3 - 0.045 13.1 0.1 0.073 12.4 0.1 1.3 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Serglycin PF04360.12 NODE_76655_length_206_cov_1.315789_g68714_i0reverse_frame_3 - 1.2 9.1 3.1 8.6 6.3 3.7 1.8 1 1 1 2 2 2 0 Serglycin zf-Paramyx-P PF13008.7 NODE_76652_length_206_cov_1.350877_g68711_i0reverse_frame_3 - 0.17 11.4 0.0 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding domain of Paramyxoviridae V protein MetW PF07021.12 NODE_76650_length_206_cov_1.374269_g68709_i0reverse_frame_3 - 0.07 12.7 0.1 0.07 12.7 0.1 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW DUF5397 PF17375.2 NODE_76650_length_206_cov_1.374269_g68709_i0forward_frame_3 - 0.17 11.6 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5397) Tachystatin_A PF11406.8 NODE_76650_length_206_cov_1.374269_g68709_i0forward_frame_2 - 0.063 13.3 1.9 0.14 12.2 1.9 1.6 1 1 0 1 1 1 0 Antimicrobial peptide tachystatin A HMG_box_5 PF14887.6 NODE_76649_length_206_cov_1.374269_g68708_i0reverse_frame_3 - 0.0082 16.1 0.0 0.01 15.8 0.0 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box 5 OCIA PF07051.11 NODE_76648_length_206_cov_1.380117_g68707_i0reverse_frame_3 - 0.14 12.2 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Ovarian carcinoma immunoreactive antigen (OCIA) ACTL7A_N PF16840.5 NODE_76640_length_206_cov_1.397661_g68699_i0reverse_frame_2 - 0.048 13.7 0.0 0.063 13.3 0.0 1.2 1 0 0 1 1 1 0 Actin-like protein 7A N-terminus EF-hand_1 PF00036.32 NODE_76639_length_206_cov_1.397661_g68698_i0forward_frame_2 - 0.0075 15.7 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_76639_length_206_cov_1.397661_g68698_i0forward_frame_2 - 0.053 13.5 0.0 0.069 13.1 0.0 1.3 1 1 0 1 1 1 0 EF-hand domain EF-hand_5 PF13202.6 NODE_76639_length_206_cov_1.397661_g68698_i0forward_frame_2 - 0.16 11.5 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 EF hand Phage_tail_U PF06141.11 NODE_76635_length_206_cov_1.397661_g68694_i0reverse_frame_2 - 0.062 13.7 0.1 0.071 13.5 0.1 1.1 1 0 0 1 1 1 0 Phage minor tail protein U ComJ PF11033.8 NODE_76634_length_206_cov_1.403509_g68693_i0reverse_frame_3 - 0.061 13.0 0.0 0.075 12.7 0.0 1.1 1 0 0 1 1 1 0 Competence protein J (ComJ) Porphobil_deam PF01379.20 NODE_76632_length_206_cov_1.403509_g68691_i0reverse_frame_2 - 2e-20 73.2 0.1 2.1e-20 73.1 0.1 1.0 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain PH_8 PF15409.6 NODE_76629_length_206_cov_1.403509_g68688_i0reverse_frame_2 - 0.011 16.0 0.1 0.012 15.9 0.1 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain Bac_export_2 PF01312.19 NODE_76625_length_206_cov_1.409357_g68684_i0reverse_frame_3 - 0.12 11.6 0.3 0.13 11.5 0.3 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family EspB_PE PF18625.1 NODE_76620_length_206_cov_1.438596_g68679_i0reverse_frame_3 - 0.05 14.1 0.1 0.067 13.7 0.1 1.1 1 0 0 1 1 1 0 ESX-1 secreted protein B PE domain PMD PF10536.9 NODE_76620_length_206_cov_1.438596_g68679_i0forward_frame_2 - 0.055 12.6 0.0 0.055 12.6 0.0 1.0 1 0 0 1 1 1 0 Plant mobile domain Inositol_P PF00459.25 NODE_76610_length_206_cov_1.526316_g68669_i0reverse_frame_2 - 4.5e-08 32.9 0.1 5.1e-08 32.7 0.1 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family DEAD PF00270.29 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 5.6e-09 36.0 0.1 6.2e-09 35.9 0.1 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase PhoH PF02562.16 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.0019 17.7 0.1 0.0021 17.6 0.1 1.0 1 0 0 1 1 1 1 PhoH-like protein ResIII PF04851.15 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.015 15.3 0.0 0.016 15.2 0.0 1.0 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit DnaB_C PF03796.15 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.027 13.8 0.0 0.028 13.7 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain T2SSE PF00437.20 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.086 11.9 0.0 0.096 11.7 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein IstB_IS21 PF01695.17 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.089 12.5 0.0 0.096 12.4 0.0 1.0 1 0 0 1 1 1 0 IstB-like ATP binding protein Dynamin_N PF00350.23 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.0062 16.6 0.2 0.011 15.8 0.0 1.5 2 0 0 2 2 2 1 Dynamin family MMR_HSR1 PF01926.23 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.014 15.5 0.1 0.029 14.5 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AIG1 PF04548.16 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.029 13.7 0.0 0.044 13.1 0.0 1.3 1 0 0 1 1 1 0 AIG1 family AAA_6 PF12774.7 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.093 11.7 0.1 0.097 11.6 0.1 1.0 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region DVL PF08137.12 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.13 12.1 0.4 0.19 11.6 0.4 1.2 1 0 0 1 1 1 0 DVL family Sulfatase PF00884.23 NODE_76604_length_206_cov_1.543860_g68663_i0reverse_frame_2 - 1.7e-10 40.8 0.0 1.7e-10 40.8 0.0 1.0 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 NODE_76604_length_206_cov_1.543860_g68663_i0reverse_frame_2 - 0.047 13.3 0.0 0.049 13.2 0.0 1.0 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF2688 PF10892.8 NODE_76594_length_206_cov_1.625731_g68653_i0reverse_frame_3 - 0.035 13.6 0.0 0.043 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) zf-C2H2 PF00096.26 NODE_76594_length_206_cov_1.625731_g68653_i0reverse_frame_3 - 0.45 11.1 7.3 0.64 10.6 7.3 1.2 1 0 0 1 1 1 0 Zinc finger, C2H2 type ArfGap PF01412.18 NODE_76594_length_206_cov_1.625731_g68653_i0reverse_frame_3 - 0.47 10.6 2.4 0.59 10.2 2.4 1.2 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Iron_permease PF04120.12 NODE_76593_length_206_cov_1.625731_g68652_i0forward_frame_3 - 0.17 11.7 3.0 0.21 11.3 3.0 1.3 1 0 0 1 1 1 0 Low affinity iron permease DUF5408 PF17402.2 NODE_76593_length_206_cov_1.625731_g68652_i0forward_frame_3 - 0.56 10.1 6.6 0.27 11.2 3.4 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5408) Somatostatin PF03002.15 NODE_76592_length_206_cov_1.625731_g68651_i0forward_frame_2 - 3.1 7.8 7.5 2.1 8.4 5.8 1.6 2 0 0 2 2 2 0 Somatostatin/Cortistatin family DUF5357 PF17310.2 NODE_76588_length_206_cov_1.637427_g68647_i0forward_frame_2 - 0.16 10.5 0.6 0.16 10.5 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) DUF5351 PF17302.2 NODE_76586_length_206_cov_1.649123_g68645_i0reverse_frame_2 - 0.073 13.3 0.8 0.15 12.3 0.8 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5351) RVT_1 PF00078.27 NODE_76585_length_206_cov_1.654971_g68644_i0forward_frame_2 - 0.014 14.9 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) NADHdh PF00146.21 NODE_76569_length_206_cov_1.818713_g68628_i0forward_frame_3 - 0.055 12.8 0.1 0.057 12.7 0.1 1.0 1 0 0 1 1 1 0 NADH dehydrogenase Sec31 PF11549.8 NODE_76568_length_206_cov_1.824561_g68627_i0reverse_frame_3 - 0.046 13.6 0.0 0.069 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein transport protein SEC31 MOSC_N PF03476.16 NODE_76567_length_206_cov_1.824561_g68626_i0forward_frame_3 - 0.00014 21.7 0.0 0.00021 21.1 0.0 1.3 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain zf-MYND PF01753.18 NODE_76567_length_206_cov_1.824561_g68626_i0forward_frame_3 - 0.1 12.7 0.1 0.17 12.0 0.1 1.4 1 0 0 1 1 1 0 MYND finger RtcR PF06956.11 NODE_76560_length_206_cov_1.853801_g68619_i0reverse_frame_3 - 6.1e-25 87.7 0.0 6.6e-25 87.6 0.0 1.0 1 0 0 1 1 1 1 Regulator of RNA terminal phosphate cyclase ArAE_2 PF10334.9 NODE_76560_length_206_cov_1.853801_g68619_i0reverse_frame_3 - 0.11 12.4 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Aromatic acid exporter family member 2 CABS1 PF15367.6 NODE_76556_length_206_cov_1.859649_g68615_i0forward_frame_3 - 0.18 10.9 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Calcium-binding and spermatid-specific protein 1 RSF PF14876.6 NODE_76544_length_206_cov_1.900585_g68603_i0forward_frame_2 - 0.19 10.6 0.1 0.21 10.5 0.1 1.0 1 0 0 1 1 1 0 Respiratory growth transcriptional regulator PRIMA1 PF16101.5 NODE_76542_length_206_cov_1.906433_g68601_i0reverse_frame_2 - 0.23 11.5 6.1 0.35 10.9 5.9 1.4 1 1 0 1 1 1 0 Proline-rich membrane anchor 1 MtlR PF05068.12 NODE_76540_length_206_cov_1.912281_g68599_i0reverse_frame_2 - 0.00065 19.8 0.0 0.00073 19.6 0.0 1.1 1 0 0 1 1 1 1 Mannitol repressor DUF2518 PF10726.9 NODE_76540_length_206_cov_1.912281_g68599_i0forward_frame_3 - 0.046 13.4 0.1 0.046 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of function (DUF2518) ABC_tran PF00005.27 NODE_76538_length_206_cov_1.959064_g68597_i0forward_frame_2 - 0.00012 22.6 0.0 0.00016 22.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter DUF4825 PF16107.5 NODE_76537_length_206_cov_1.964912_g68596_i0reverse_frame_3 - 0.017 15.2 0.0 0.021 14.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4825) DUF3989 PF13150.6 NODE_76536_length_206_cov_1.964912_g68595_i0reverse_frame_3 - 0.16 11.7 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) DUF2554 PF10829.8 NODE_76533_length_206_cov_2.011696_g68592_i0reverse_frame_2 - 0.031 14.7 0.0 0.034 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2554) Thymidylat_synt PF00303.19 NODE_76530_length_206_cov_2.029240_g68589_i0forward_frame_2 - 4e-11 42.6 0.2 4.7e-11 42.3 0.2 1.0 1 0 0 1 1 1 1 Thymidylate synthase DUF2878 PF11086.8 NODE_76529_length_206_cov_2.029240_g68588_i0reverse_frame_2 - 0.047 13.9 0.3 0.051 13.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2878) Archease PF01951.16 NODE_76527_length_206_cov_2.040936_g68586_i0forward_frame_3 - 0.066 13.5 0.0 0.079 13.2 0.0 1.0 1 0 0 1 1 1 0 Archease protein family (MTH1598/TM1083) Phe_ZIP PF08916.11 NODE_76527_length_206_cov_2.040936_g68586_i0forward_frame_3 - 0.091 13.5 0.0 0.13 13.0 0.0 1.2 1 0 0 1 1 1 0 Phenylalanine zipper SASP PF00269.20 NODE_76518_length_206_cov_2.081871_g68577_i0reverse_frame_3 - 0.2 11.7 0.0 0.23 11.5 0.0 1.1 1 0 0 1 1 1 0 Small, acid-soluble spore proteins, alpha/beta type zf-NADH-PPase PF09297.11 NODE_76516_length_206_cov_2.093567_g68575_i0forward_frame_3 - 0.053 13.2 0.4 0.25 11.1 0.1 2.1 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Peptidase_S68 PF10461.9 NODE_76513_length_206_cov_2.146199_g68572_i0reverse_frame_2 - 0.057 13.6 0.1 0.1 12.8 0.1 1.4 1 0 0 1 1 1 0 Peptidase S68 RRP14 PF15459.6 NODE_76508_length_206_cov_2.204678_g68567_i0reverse_frame_3 - 0.034 14.8 0.0 0.041 14.5 0.0 1.2 1 0 0 1 1 1 0 60S ribosome biogenesis protein Rrp14 PriX PF18689.1 NODE_76506_length_206_cov_2.216374_g68565_i0reverse_frame_2 - 0.033 14.5 0.2 0.038 14.3 0.2 1.1 1 0 0 1 1 1 0 Primase X # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks363.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks363.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks363.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks363.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:09:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4998 PF16389.5 NODE_76498_length_206_cov_2.292398_g68557_i0reverse_frame_2 - 0.14 11.8 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function GGDEF PF00990.21 NODE_76496_length_206_cov_2.298246_g68555_i0forward_frame_2 - 4.7e-23 81.7 0.4 5.1e-23 81.6 0.4 1.0 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain ParB_C PF18064.1 NODE_76495_length_206_cov_2.304094_g68554_i0forward_frame_3 - 0.13 12.5 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Centromere-binding protein ParB C-terminal HTH_OrfB_IS605 PF12323.8 NODE_76494_length_206_cov_2.321637_g68553_i0forward_frame_3 - 0.044 13.3 0.1 0.089 12.3 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain CxC6 PF18721.1 NODE_76491_length_206_cov_2.339181_g68550_i0reverse_frame_3 - 0.56 10.5 10.5 1.4 9.2 10.6 1.9 1 1 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases Phage_tail_X PF05489.12 NODE_76491_length_206_cov_2.339181_g68550_i0forward_frame_3 - 0.19 11.4 0.2 0.26 11.0 0.2 1.2 1 0 0 1 1 1 0 Phage Tail Protein X Microcin PF03526.13 NODE_76487_length_206_cov_2.374269_g68546_i0forward_frame_3 - 0.098 12.5 0.1 0.15 11.9 0.1 1.3 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein MCM PF00493.23 NODE_76486_length_206_cov_2.380117_g68545_i0reverse_frame_3 - 7.3e-13 48.1 0.0 8.1e-13 48.0 0.0 1.0 1 0 0 1 1 1 1 MCM P-loop domain BLUF PF04940.12 NODE_76486_length_206_cov_2.380117_g68545_i0reverse_frame_3 - 0.079 13.1 0.1 0.16 12.1 0.1 1.6 1 1 0 1 1 1 0 Sensors of blue-light using FAD Siah-Interact_N PF09032.11 NODE_76486_length_206_cov_2.380117_g68545_i0reverse_frame_3 - 0.08 13.3 0.4 0.1 12.9 0.4 1.2 1 0 0 1 1 1 0 Siah interacting protein, N terminal T2SSppdC PF12528.8 NODE_76485_length_206_cov_2.385965_g68544_i0reverse_frame_2 - 0.029 15.1 0.4 0.038 14.7 0.4 1.3 1 1 0 1 1 1 0 Type II secretion prepilin peptidase dependent protein C Toxin_TOLIP PF00087.21 NODE_76482_length_206_cov_2.450292_g68541_i0reverse_frame_2 - 1.4 9.2 6.2 5.4 7.3 1.0 2.2 1 1 1 2 2 2 0 Snake toxin and toxin-like protein DUF4235 PF14019.6 NODE_76481_length_206_cov_2.456140_g68540_i0reverse_frame_2 - 0.029 14.4 0.2 1.4 9.1 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4235) B12D PF06522.11 NODE_76481_length_206_cov_2.456140_g68540_i0reverse_frame_2 - 0.19 11.6 0.7 0.28 11.0 0.7 1.2 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Gemini_mov PF01708.16 NODE_76479_length_206_cov_2.473684_g68538_i0forward_frame_3 - 1.2 8.9 3.8 1.5 8.6 3.8 1.1 1 0 0 1 1 1 0 Geminivirus putative movement protein CG-1 PF03859.16 NODE_76478_length_206_cov_2.497076_g68537_i0forward_frame_2 - 0.032 14.0 0.0 0.036 13.8 0.0 1.1 1 0 0 1 1 1 0 CG-1 domain DUF3931 PF13082.6 NODE_76475_length_206_cov_2.514620_g68534_i0reverse_frame_2 - 0.093 12.9 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3931) Tfb4 PF03850.14 NODE_76474_length_206_cov_2.538012_g68533_i0reverse_frame_2 - 0.81 9.1 4.8 0.94 8.9 4.8 1.0 1 0 0 1 1 1 0 Transcription factor Tfb4 APC_u15 PF16636.5 NODE_76473_length_206_cov_2.538012_g68532_i0reverse_frame_3 - 0.2 12.1 2.1 0.22 12.0 2.1 1.1 1 0 0 1 1 1 0 Unstructured region on APC between APC_crr regions 5 and 6 4HBT_2 PF13279.6 NODE_76472_length_206_cov_2.561404_g68531_i0reverse_frame_3 - 0.01 16.3 0.4 0.01 16.3 0.4 1.0 1 0 0 1 1 1 0 Thioesterase-like superfamily DnaJ_CXXCXGXG PF00684.19 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 3.8e-05 24.0 9.1 4.9e-05 23.6 9.1 1.2 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 0.0012 18.8 1.7 0.0016 18.3 1.7 1.3 1 0 0 1 1 1 1 Tryptophan RNA-binding attenuator protein inhibitory protein HypA PF01155.19 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 0.033 14.2 0.1 0.033 14.2 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DnaJ_C PF01556.18 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 0.044 13.9 0.0 0.045 13.8 0.0 1.1 1 0 0 1 1 1 0 DnaJ C terminal domain DUF5351 PF17302.2 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 0.75 10.0 7.8 2.9 8.1 0.7 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5351) VPS13_C PF16909.5 NODE_76467_length_206_cov_2.643275_g68526_i0reverse_frame_3 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Vacuolar-sorting-associated 13 protein C-terminal FTHFS PF01268.19 NODE_76467_length_206_cov_2.643275_g68526_i0forward_frame_2 - 7.4e-28 97.1 0.0 7.9e-28 97.0 0.0 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase BRX_N PF13713.6 NODE_76467_length_206_cov_2.643275_g68526_i0forward_frame_2 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Transcription factor BRX N-terminal domain Dimerisation2 PF16864.5 NODE_76463_length_206_cov_2.707602_g68522_i0reverse_frame_2 - 0.1 12.6 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain DUF349 PF03993.12 NODE_76463_length_206_cov_2.707602_g68522_i0forward_frame_2 - 0.0021 18.3 4.2 0.0022 18.2 4.2 1.1 1 0 0 1 1 1 1 Domain of Unknown Function (DUF349) GAGA PF09237.11 NODE_76454_length_206_cov_2.894737_g68513_i0reverse_frame_3 - 0.031 14.1 0.1 0.04 13.7 0.1 1.1 1 0 0 1 1 1 0 GAGA factor RRN9 PF10680.9 NODE_76453_length_206_cov_2.906433_g68512_i0forward_frame_3 - 0.047 14.0 0.3 0.057 13.7 0.3 1.3 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor ILVD_EDD PF00920.21 NODE_76453_length_206_cov_2.906433_g68512_i0forward_frame_2 - 4e-14 52.1 0.0 4.2e-14 52.1 0.0 1.0 1 0 0 1 1 1 1 Dehydratase family Baculo_PEP_C PF04513.12 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.0015 18.6 2.2 0.0017 18.4 2.2 1.0 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus CdvA PF18822.1 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.015 15.2 5.4 0.17 11.7 1.4 2.0 1 1 1 2 2 2 0 CdvA-like coiled-coil domain SKA2 PF16740.5 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.021 14.6 1.7 0.028 14.2 1.5 1.2 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 KxDL PF10241.9 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.046 14.0 3.3 0.058 13.7 3.3 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein MbeB_N PF04837.12 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.061 13.6 1.7 0.46 10.8 0.6 2.3 1 1 1 2 2 2 0 MbeB-like, N-term conserved region KIP1 PF07765.12 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.061 13.4 4.7 0.059 13.5 3.0 1.7 1 1 1 2 2 2 0 KIP1-like protein Snf7 PF03357.21 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.073 12.7 3.8 0.08 12.5 3.8 1.0 1 0 0 1 1 1 0 Snf7 Cep57_CLD_2 PF14197.6 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.084 13.0 4.6 0.12 12.5 4.6 1.2 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 HBB PF06777.11 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.086 12.5 0.7 0.1 12.3 0.7 1.0 1 0 0 1 1 1 0 Helical and beta-bridge domain IMD PF08397.11 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.086 12.2 2.5 0.095 12.1 2.5 1.0 1 0 0 1 1 1 0 IRSp53/MIM homology domain Syntaxin-6_N PF09177.11 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.086 13.4 1.1 0.095 13.3 1.1 1.1 1 0 0 1 1 1 0 Syntaxin 6, N-terminal RAD51_interact PF15696.5 NODE_76449_length_206_cov_3.274854_g68508_i0forward_frame_2 - 0.1 12.7 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 RAD51 interacting motif L27_2 PF09045.10 NODE_76447_length_206_cov_3.374269_g68506_i0reverse_frame_2 - 0.081 12.9 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 L27_2 DUF4866 PF16160.5 NODE_76442_length_206_cov_3.766082_g68501_i0reverse_frame_3 - 0.077 12.3 0.0 0.083 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4866) DUF5605 PF18310.1 NODE_76441_length_206_cov_3.771930_g68500_i0forward_frame_2 - 0.051 13.5 0.1 0.052 13.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5605) Fic_N PF13784.6 NODE_76440_length_206_cov_3.935673_g68499_i0forward_frame_3 - 0.092 12.8 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Fic/DOC family N-terminal TPP_enzyme_N PF02776.18 NODE_76439_length_206_cov_4.128655_g68498_i0forward_frame_2 - 0.027 14.1 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DUF5516 PF17637.2 NODE_76437_length_206_cov_4.473684_g68496_i0forward_frame_3 - 0.012 15.4 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5516) Epiglycanin_TR PF05647.11 NODE_76436_length_206_cov_4.947368_g68495_i0forward_frame_3 - 0.029 14.3 4.6 0.035 14.0 4.6 1.2 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like Phospholamban PF04272.14 NODE_76434_length_206_cov_7.736842_g68493_i0forward_frame_3 - 0.075 12.5 1.4 0.082 12.4 0.4 1.6 1 1 0 1 1 1 0 Phospholamban DUF5499 PF17603.2 NODE_76432_length_206_cov_8.403509_g68491_i0forward_frame_2 - 0.022 15.3 0.5 0.025 15.2 0.5 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5499) YtpI PF14007.6 NODE_76426_length_206_cov_20.602339_g68485_i0forward_frame_3 - 1.9 8.7 7.1 3.1 8.0 7.1 1.3 1 0 0 1 1 1 0 YtpI-like protein TetR_C_13 PF16925.5 NODE_76425_length_206_cov_21.046784_g68484_i0forward_frame_2 - 0.13 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Ribosomal_L23eN PF03939.13 NODE_76421_length_206_cov_28.163743_g68480_i0reverse_frame_3 - 0.079 13.2 0.3 0.11 12.8 0.3 1.2 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain NADHdh-2_N PF12155.8 NODE_76420_length_206_cov_29.461988_g68479_i0forward_frame_3 - 0.16 12.4 0.1 0.22 11.9 0.1 1.2 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 N-terminal MTBP_N PF14918.6 NODE_76417_length_206_cov_32.421053_g68476_i0reverse_frame_2 - 0.016 14.7 0.1 0.016 14.7 0.1 1.0 1 0 0 1 1 1 0 MDM2-binding ESM4 PF15952.5 NODE_76417_length_206_cov_32.421053_g68476_i0reverse_frame_2 - 0.037 14.5 4.8 0.041 14.3 4.8 1.0 1 0 0 1 1 1 0 Enhancer of split M4 family DmpG_comm PF07836.11 NODE_76415_length_206_cov_33.116959_g68474_i0forward_frame_2 - 0.061 12.9 0.0 0.072 12.6 0.0 1.1 1 0 0 1 1 1 0 DmpG-like communication domain UvrD_C_2 PF13538.6 NODE_76413_length_206_cov_35.432749_g68472_i0forward_frame_3 - 0.092 12.6 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain YMF19 PF02326.15 NODE_76411_length_206_cov_36.175439_g68470_i0reverse_frame_2 - 0.039 14.7 0.1 0.042 14.6 0.1 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 SMRP1 PF15181.6 NODE_76411_length_206_cov_36.175439_g68470_i0forward_frame_2 - 0.12 12.0 2.2 0.98 9.0 1.5 1.9 1 1 1 2 2 2 0 Spermatid-specific manchette-related protein 1 DUF2393 PF09624.10 NODE_76409_length_206_cov_37.070175_g68468_i0forward_frame_2 - 1.1 9.3 4.4 1.1 9.2 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) UCH PF00443.29 NODE_76407_length_206_cov_38.742690_g68466_i0reverse_frame_2 - 6.4e-07 29.1 0.6 7e-07 29.0 0.6 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase NAC PF01849.18 NODE_76407_length_206_cov_38.742690_g68466_i0reverse_frame_2 - 0.069 13.1 0.0 0.093 12.7 0.0 1.2 1 0 0 1 1 1 0 NAC domain CW_binding_1 PF01473.20 NODE_76407_length_206_cov_38.742690_g68466_i0reverse_frame_2 - 0.13 12.6 2.7 0.23 11.9 2.7 1.4 1 0 0 1 1 1 0 Putative cell wall binding repeat PDR_CDR PF06422.12 NODE_76405_length_206_cov_40.339181_g68464_i0forward_frame_2 - 0.014 15.3 1.0 1.2 9.0 0.0 2.0 1 1 1 2 2 2 0 CDR ABC transporter AstE_AspA PF04952.14 NODE_76403_length_206_cov_44.491228_g68462_i0reverse_frame_3 - 0.034 13.2 0.2 0.035 13.2 0.2 1.0 1 0 0 1 1 1 0 Succinylglutamate desuccinylase / Aspartoacylase family FOXO_KIX_bdg PF16675.5 NODE_76403_length_206_cov_44.491228_g68462_i0reverse_frame_3 - 0.1 12.9 0.4 0.13 12.5 0.4 1.3 1 1 0 1 1 1 0 KIX-binding domain of forkhead box O, CR2 SH3-RhoG_link PF16609.5 NODE_76403_length_206_cov_44.491228_g68462_i0forward_frame_2 - 0.063 13.0 1.9 0.071 12.8 1.9 1.1 1 0 0 1 1 1 0 SH3-RhoGEF linking unstructured region Mdv1 PF11542.8 NODE_76397_length_206_cov_46.777778_g68456_i0forward_frame_3 - 0.041 13.8 0.2 0.059 13.3 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial division protein 1 PV-1 PF06637.11 NODE_76395_length_206_cov_51.649123_g68454_i0reverse_frame_3 - 0.047 12.5 0.1 0.048 12.5 0.1 1.0 1 0 0 1 1 1 0 PV-1 protein (PLVAP) DUF2789 PF10982.8 NODE_76393_length_206_cov_54.555556_g68452_i0reverse_frame_3 - 0.095 12.9 0.4 0.13 12.5 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2789) PHM7_ext PF12621.8 NODE_76386_length_206_cov_64.912281_g68445_i0forward_frame_2 - 0.15 12.2 0.1 0.2 11.9 0.1 1.2 1 0 0 1 1 1 0 Extracellular tail, of 10TM putative phosphate transporter NOT2_3_5 PF04153.18 NODE_76381_length_206_cov_88.029240_g68440_i0reverse_frame_3 - 0.061 13.4 1.0 0.066 13.3 1.0 1.0 1 0 0 1 1 1 0 NOT2 / NOT3 / NOT5 family CotJB PF12652.7 NODE_76381_length_206_cov_88.029240_g68440_i0reverse_frame_3 - 0.071 13.3 4.0 0.092 13.0 4.0 1.2 1 0 0 1 1 1 0 CotJB protein Ald_Xan_dh_C PF01315.22 NODE_76378_length_206_cov_102.023392_g68437_i0reverse_frame_2 - 0.049 14.0 0.0 0.052 13.9 0.0 1.2 1 0 0 1 1 1 0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RP854 PF17460.2 NODE_76371_length_206_cov_162.988304_g68430_i0reverse_frame_2 - 0.046 13.5 0.5 0.046 13.5 0.5 1.1 1 0 0 1 1 1 0 Uncharacterized protein RP854 PIRT PF15099.6 NODE_76371_length_206_cov_162.988304_g68430_i0forward_frame_2 - 0.024 14.2 3.9 0.022 14.4 3.4 1.2 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family zf-nanos PF05741.13 NODE_76367_length_206_cov_223.029240_g68426_i0forward_frame_3 - 0.01 16.0 0.6 0.01 16.0 0.6 1.9 2 1 0 2 2 2 0 Nanos RNA binding domain SH3_11 PF18103.1 NODE_76364_length_206_cov_331.473684_g68423_i0forward_frame_3 - 0.03 14.5 0.6 0.041 14.1 0.6 1.3 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain Cation_ATPase_C PF00689.21 NODE_76363_length_206_cov_351.111111_g68422_i0reverse_frame_2 - 0.077 12.7 0.3 0.09 12.5 0.3 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF4995 PF16386.5 NODE_76362_length_206_cov_356.286550_g68421_i0forward_frame_2 - 0.086 12.9 0.2 0.11 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function YMF19 PF02326.15 NODE_76358_length_206_cov_3967.450292_g68417_i0reverse_frame_2 - 1 10.2 8.0 1.3 9.9 8.0 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 ubiquitin PF00240.23 NODE_76355_length_206_cov_47885.374269_g68414_i0reverse_frame_2 - 9.3e-16 57.3 0.3 1.2e-15 57.0 0.3 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_76355_length_206_cov_47885.374269_g68414_i0reverse_frame_2 - 3.1e-06 26.9 0.1 3.6e-06 26.7 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_76355_length_206_cov_47885.374269_g68414_i0reverse_frame_2 - 0.00038 20.9 0.0 0.00041 20.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Sperm_Ag_HE2 PF05324.13 NODE_76352_length_206_cov_122279.497076_g68411_i0reverse_frame_3 - 0.14 12.6 0.0 0.17 12.4 0.0 1.1 1 0 0 1 1 1 0 Sperm antigen HE2 VPDSG-CTERM PF18205.1 NODE_76350_length_207_cov_0.784884_g68409_i0forward_frame_2 - 6.3 6.7 15.6 3.6 7.5 3.7 2.4 2 0 0 2 2 2 0 VPDSG-CTERM motif Arm-DNA-bind_3 PF13356.6 NODE_76349_length_207_cov_0.831395_g68408_i0reverse_frame_3 - 0.47 10.9 1.7 3.5 8.1 1.7 2.0 1 1 0 1 1 1 0 Arm DNA-binding domain DPPIV_rep PF18811.1 NODE_76349_length_207_cov_0.831395_g68408_i0forward_frame_3 - 0.13 12.2 0.1 13 5.9 0.0 2.5 2 0 0 2 2 2 0 Dipeptidyl peptidase IV (DPP IV) low complexity region Toxin_6 PF05453.12 NODE_76347_length_207_cov_0.883721_g68406_i0reverse_frame_3 - 0.21 12.0 1.9 0.26 11.7 1.9 1.1 1 0 0 1 1 1 0 BmTXKS1/BmP02 toxin family PRD PF00874.20 NODE_76345_length_207_cov_0.906977_g68404_i0reverse_frame_2 - 0.12 12.7 0.4 0.15 12.4 0.4 1.1 1 0 0 1 1 1 0 PRD domain K_channel_TID PF07941.11 NODE_76344_length_207_cov_0.918605_g68403_i0reverse_frame_2 - 0.04 14.4 0.1 0.052 14.0 0.1 1.2 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain Pro_racemase PF05544.11 NODE_76343_length_207_cov_0.918605_g68402_i0forward_frame_2 - 0.049 12.7 0.1 0.057 12.5 0.1 1.0 1 0 0 1 1 1 0 Proline racemase Pmp3 PF01679.17 NODE_76341_length_207_cov_0.924419_g68400_i0forward_frame_3 - 0.07 13.3 1.0 0.07 13.3 1.0 2.2 1 1 1 2 2 2 0 Proteolipid membrane potential modulator PHtD_u1 PF16645.5 NODE_76337_length_207_cov_0.930233_g68396_i0reverse_frame_3 - 0.087 13.3 1.5 0.11 13.0 1.5 1.3 1 0 0 1 1 1 0 Unstructured region on Pneumococcal histidine triad protein Metal_resist PF13801.6 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_3 - 0.0062 16.7 0.3 0.0067 16.6 0.3 1.0 1 0 0 1 1 1 1 Heavy-metal resistance GP88 PF17338.2 NODE_76328_length_207_cov_0.930233_g68387_i0reverse_frame_3 - 0.012 15.0 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 Gene product 88 YceD PF02620.17 NODE_76328_length_207_cov_0.930233_g68387_i0reverse_frame_3 - 0.022 14.9 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Large ribosomal RNA subunit accumulation protein YceD TFIIF_alpha PF05793.12 NODE_76325_length_207_cov_0.930233_g68384_i0forward_frame_2 - 3.6 6.1 5.4 3.3 6.2 5.4 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Mucin PF01456.17 NODE_76325_length_207_cov_0.930233_g68384_i0forward_frame_2 - 4.6 7.2 28.3 4.6 7.2 28.3 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF772 PF05598.11 NODE_76324_length_207_cov_0.930233_g68383_i0reverse_frame_2 - 0.042 13.9 0.0 0.048 13.7 0.0 1.3 1 0 0 1 1 1 0 Transposase domain (DUF772) RSN1_7TM PF02714.15 NODE_76322_length_207_cov_0.930233_g68381_i0reverse_frame_2 - 0.0021 17.4 2.4 0.0022 17.4 2.4 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate zf-3CxxC PF13695.6 NODE_76317_length_207_cov_0.930233_g68376_i0forward_frame_3 - 0.04 14.4 0.1 0.049 14.1 0.1 1.0 1 0 0 1 1 1 0 Zinc-binding domain Atrophin-1 PF03154.15 NODE_76316_length_207_cov_0.947674_g68375_i0reverse_frame_3 - 0.018 13.4 0.9 0.016 13.6 0.9 1.0 1 0 0 1 1 1 0 Atrophin-1 family Herpes_capsid PF06112.11 NODE_76315_length_207_cov_0.959302_g68374_i0forward_frame_2 - 5.6 7.0 10.1 6.6 6.8 10.1 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Tsg PF04668.12 NODE_76314_length_207_cov_0.970930_g68373_i0reverse_frame_2 - 1.5 9.5 8.3 1.6 9.4 8.3 1.1 1 0 0 1 1 1 0 Twisted gastrulation (Tsg) protein conserved region TF_AP-2 PF03299.14 NODE_76314_length_207_cov_0.970930_g68373_i0forward_frame_3 - 0.074 13.0 0.0 0.08 12.9 0.0 1.0 1 0 0 1 1 1 0 Transcription factor AP-2 Sgf11_N PF18519.1 NODE_76308_length_207_cov_1.058140_g68367_i0reverse_frame_3 - 0.085 12.4 0.9 0.13 11.8 0.9 1.2 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain P22_portal PF16510.5 NODE_76308_length_207_cov_1.058140_g68367_i0reverse_frame_2 - 0.13 10.8 0.2 0.15 10.6 0.2 1.0 1 0 0 1 1 1 0 Phage P22-like portal protein DUF3887 PF13026.6 NODE_76305_length_207_cov_1.075581_g68364_i0reverse_frame_3 - 0.11 13.4 0.1 0.11 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3887) zf-C4_ClpX PF06689.13 NODE_76305_length_207_cov_1.075581_g68364_i0reverse_frame_2 - 0.12 12.3 0.7 0.18 11.7 0.7 1.3 1 0 0 1 1 1 0 ClpX C4-type zinc finger MCCD1 PF15707.5 NODE_76305_length_207_cov_1.075581_g68364_i0forward_frame_3 - 0.044 14.2 0.0 0.057 13.9 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial coiled-coil domain protein 1 MYCBPAP PF14646.6 NODE_76304_length_207_cov_1.075581_g68363_i0reverse_frame_3 - 0.026 13.5 0.1 0.028 13.4 0.1 1.0 1 0 0 1 1 1 0 MYCBP-associated protein family TRAM1 PF08390.11 NODE_76304_length_207_cov_1.075581_g68363_i0forward_frame_2 - 6.7 6.4 6.1 2.5 7.8 0.9 2.2 2 1 0 2 2 2 0 TRAM1-like protein tify PF06200.14 NODE_76303_length_207_cov_1.075581_g68362_i0reverse_frame_3 - 0.24 10.7 0.1 0.43 10.0 0.1 1.4 1 0 0 1 1 1 0 tify domain Vac_Fusion PF02346.16 NODE_76303_length_207_cov_1.075581_g68362_i0reverse_frame_2 - 0.15 11.7 0.6 0.19 11.4 0.6 1.2 1 0 0 1 1 1 0 Chordopoxvirus multifunctional envelope protein A27 DotD PF16816.5 NODE_76302_length_207_cov_1.081395_g68361_i0forward_frame_2 - 0.086 12.8 0.0 0.092 12.7 0.0 1.1 1 0 0 1 1 1 0 DotD protein PhyH PF05721.13 NODE_76290_length_207_cov_1.156977_g68349_i0reverse_frame_2 - 0.031 14.5 0.3 0.034 14.4 0.3 1.1 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) DUF2647 PF10839.8 NODE_76288_length_207_cov_1.162791_g68347_i0reverse_frame_2 - 0.025 14.6 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2647) DtxR PF18357.1 NODE_76287_length_207_cov_1.162791_g68346_i0reverse_frame_3 - 0.13 12.0 0.1 0.2 11.3 0.1 1.3 1 0 0 1 1 1 0 Diphteria toxin repressor SH3 domain Peptidase_M6 PF05547.11 NODE_76286_length_207_cov_1.162791_g68345_i0reverse_frame_3 - 0.021 13.2 0.0 0.021 13.2 0.0 1.0 1 0 0 1 1 1 0 Immune inhibitor A peptidase M6 Glyco_hydro_65C PF03633.15 NODE_76284_length_207_cov_1.162791_g68343_i0forward_frame_2 - 0.034 14.1 0.1 0.074 13.0 0.0 1.6 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain bMG1 PF17970.1 NODE_76282_length_207_cov_1.162791_g68341_i0forward_frame_3 - 0.075 13.1 0.2 0.081 13.0 0.2 1.3 1 1 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG1 domain DUF3235 PF11574.8 NODE_76282_length_207_cov_1.162791_g68341_i0forward_frame_2 - 0.4 11.6 8.1 0.47 11.3 8.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3235) PRP4 PF08799.11 NODE_76275_length_207_cov_1.238372_g68334_i0reverse_frame_2 - 0.089 12.4 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 pre-mRNA processing factor 4 (PRP4) like RBR PF17208.3 NODE_76275_length_207_cov_1.238372_g68334_i0forward_frame_3 - 0.067 13.9 0.2 0.088 13.5 0.2 1.1 1 0 0 1 1 1 0 RNA binding Region XFP PF03894.15 NODE_76273_length_207_cov_1.244186_g68332_i0reverse_frame_3 - 0.074 12.8 0.0 0.09 12.5 0.0 1.1 1 0 0 1 1 1 0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Cas_csx3 PF09620.10 NODE_76270_length_207_cov_1.250000_g68329_i0reverse_frame_2 - 0.28 11.1 1.7 0.91 9.5 0.3 2.0 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_csx3) DUF4870 PF09685.10 NODE_76263_length_207_cov_1.279070_g68322_i0reverse_frame_2 - 0.016 15.3 0.0 0.025 14.7 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4870) Baculo_LEF-2 PF03041.14 NODE_76259_length_207_cov_1.313953_g68318_i0reverse_frame_2 - 0.054 13.1 0.5 0.063 12.9 0.5 1.1 1 0 0 1 1 1 0 lef-2 E3_UbLigase_EDD PF11547.8 NODE_76258_length_207_cov_1.325581_g68317_i0reverse_frame_2 - 0.2 11.4 0.1 0.27 11.0 0.1 1.2 1 0 0 1 1 1 0 E3 ubiquitin ligase EDD FAM181 PF15238.6 NODE_76257_length_207_cov_1.337209_g68316_i0reverse_frame_2 - 0.51 10.1 3.4 0.62 9.9 3.4 1.0 1 0 0 1 1 1 0 FAM181 UPF0542 PF15086.6 NODE_76251_length_207_cov_1.377907_g68310_i0reverse_frame_3 - 0.082 12.9 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 V1R PF03402.14 NODE_76251_length_207_cov_1.377907_g68310_i0reverse_frame_2 - 0.081 12.5 0.1 0.087 12.4 0.1 1.0 1 0 0 1 1 1 0 Vomeronasal organ pheromone receptor family, V1R Peptidase_M66 PF10462.9 NODE_76249_length_207_cov_1.383721_g68308_i0forward_frame_3 - 0.092 11.7 0.0 0.092 11.7 0.0 1.0 1 0 0 1 1 1 0 Peptidase M66 Dev_Cell_Death PF10539.9 NODE_76247_length_207_cov_1.389535_g68306_i0reverse_frame_3 - 0.04 13.8 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Development and cell death domain RecA_dep_nuc PF16786.5 NODE_76245_length_207_cov_1.389535_g68304_i0reverse_frame_2 - 0.065 13.4 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 Recombination enhancement, RecA-dependent nuclease TfuA PF07812.12 NODE_76244_length_207_cov_1.389535_g68303_i0reverse_frame_2 - 0.047 13.4 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 TfuA-like protein Vel1p PF10339.9 NODE_76244_length_207_cov_1.389535_g68303_i0reverse_frame_2 - 0.084 12.2 0.0 0.093 12.1 0.0 1.0 1 0 0 1 1 1 0 Yeast-specific zinc responsive Bact_transglu_N PF08379.10 NODE_76241_length_207_cov_1.395349_g68300_i0forward_frame_2 - 0.0095 16.8 0.1 0.0097 16.8 0.1 1.1 1 0 0 1 1 1 1 Bacterial transglutaminase-like N-terminal region Zn_ribbon_17 PF17120.5 NODE_76235_length_207_cov_1.395349_g68294_i0reverse_frame_3 - 0.023 14.3 0.3 0.03 14.0 0.3 1.1 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Zn_Tnp_IS1 PF03811.13 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.00016 21.3 1.5 0.00023 20.8 1.5 1.3 1 0 0 1 1 1 1 InsA N-terminal domain Zn_Tnp_IS1595 PF12760.7 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.0003 20.7 1.5 0.00039 20.3 1.5 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain zinc_ribbon_6 PF14599.6 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.00051 20.0 0.7 0.08 13.0 0.0 2.1 2 0 0 2 2 2 2 Zinc-ribbon zinc_ribbon_9 PF14369.6 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.0011 19.1 1.8 0.59 10.5 0.4 2.2 2 0 0 2 2 2 2 zinc-ribbon Lar_restr_allev PF14354.6 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.0013 19.1 1.4 0.0013 19.1 1.4 1.5 2 0 0 2 2 2 1 Restriction alleviation protein Lar PhnA_Zn_Ribbon PF08274.12 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.022 14.7 0.5 0.12 12.3 0.0 2.0 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Cys_rich_KTR PF14205.6 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.04 13.7 1.7 2.3 8.1 0.1 2.3 2 0 0 2 2 2 0 Cysteine-rich KTR Zn-ribbon_8 PF09723.10 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.098 12.8 2.2 0.48 10.6 0.2 2.1 2 0 0 2 2 2 0 Zinc ribbon domain zf-Dof PF02701.15 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.29 11.3 7.3 1.5 9.0 7.3 1.9 1 1 0 1 1 1 0 Dof domain, zinc finger K_channel_TID PF07941.11 NODE_76231_length_207_cov_1.395349_g68290_i0reverse_frame_3 - 0.049 14.1 3.2 0.058 13.9 3.2 1.1 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain FAE1_CUT1_RppA PF08392.12 NODE_76227_length_207_cov_1.436047_g68286_i0reverse_frame_2 - 0.035 13.4 0.1 0.036 13.4 0.1 1.1 1 0 0 1 1 1 0 FAE1/Type III polyketide synthase-like protein zinc_ribbon_4 PF13717.6 NODE_76220_length_207_cov_1.470930_g68279_i0reverse_frame_3 - 0.25 11.3 1.1 0.37 10.7 1.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Metallothio_PEC PF02068.16 NODE_76213_length_207_cov_1.523256_g68272_i0reverse_frame_2 - 0.0075 16.6 7.1 0.0086 16.4 7.1 1.2 1 0 0 1 1 1 1 Plant PEC family metallothionein zf-BED PF02892.15 NODE_76213_length_207_cov_1.523256_g68272_i0forward_frame_2 - 0.038 14.0 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 BED zinc finger ABC1 PF03109.16 NODE_76212_length_207_cov_1.523256_g68271_i0forward_frame_2 - 5.4e-07 29.8 0.0 6.5e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 ABC1 family DUF4636 PF15468.6 NODE_76209_length_207_cov_1.529070_g68268_i0forward_frame_2 - 7.2 6.2 6.4 0.63 9.7 0.5 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4636) DUF3570 PF12094.8 NODE_76206_length_207_cov_1.558140_g68265_i0reverse_frame_2 - 0.076 11.8 0.3 0.075 11.8 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3570) FBPase_glpX PF03320.13 NODE_76203_length_207_cov_1.587209_g68262_i0forward_frame_3 - 2.4e-14 52.9 0.0 2.4e-14 52.9 0.0 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded TEX15 PF15326.6 NODE_76201_length_207_cov_1.616279_g68260_i0reverse_frame_3 - 0.17 11.5 0.3 0.2 11.4 0.3 1.0 1 0 0 1 1 1 0 Testis expressed sequence 15 Lipoprotein_9 PF03180.14 NODE_76198_length_207_cov_1.622093_g68257_i0reverse_frame_2 - 7e-24 84.2 0.0 7.3e-24 84.2 0.0 1.0 1 0 0 1 1 1 1 NLPA lipoprotein Pkinase PF00069.25 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 2.1e-09 37.1 0.0 2.1e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.0086 16.0 0.0 0.0097 15.9 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.014 15.0 0.1 0.015 14.9 0.1 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase EcKinase PF02958.20 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.029 13.7 0.0 0.033 13.5 0.0 1.1 1 0 0 1 1 1 0 Ecdysteroid kinase Pkinase_Tyr PF07714.17 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.049 12.9 0.0 0.05 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase Kdo PF06293.14 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.12 11.7 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family HrpB7 PF09486.10 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.0032 17.9 0.0 0.0037 17.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) DUF4763 PF15960.5 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.008 15.5 0.9 0.0082 15.5 0.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) HMMR_N PF15905.5 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.013 15.0 5.2 0.013 15.0 5.2 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal TPR_MLP1_2 PF07926.12 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.023 14.7 4.2 0.095 12.8 4.2 1.7 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Fib_alpha PF08702.10 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.031 14.4 3.2 0.061 13.5 3.2 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family SlyX PF04102.12 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.057 14.0 0.8 0.093 13.4 0.5 1.5 1 1 1 2 2 2 0 SlyX DUF3450 PF11932.8 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.14 11.4 3.9 0.15 11.3 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Wbp11 PF09429.10 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.32 11.4 7.1 0.53 10.7 7.1 1.4 1 1 0 1 1 1 0 WW domain binding protein 11 XhlA PF10779.9 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 3.2 8.0 7.5 8.2 6.7 0.8 2.1 1 1 1 2 2 2 0 Haemolysin XhlA DUF480 PF04337.12 NODE_76188_length_207_cov_1.662791_g68247_i0reverse_frame_3 - 0.084 13.0 0.0 0.094 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF480 Ion_trans PF00520.31 NODE_76188_length_207_cov_1.662791_g68247_i0forward_frame_3 - 2.5e-08 33.5 3.0 2.6e-08 33.4 3.0 1.0 1 0 0 1 1 1 1 Ion transport protein Lamprin PF06403.11 NODE_76187_length_207_cov_1.662791_g68246_i0forward_frame_2 - 0.95 9.4 4.6 2 8.4 4.6 1.6 1 1 0 1 1 1 0 Lamprin PTR PF12789.7 NODE_76185_length_207_cov_1.674419_g68244_i0reverse_frame_3 - 0.0015 18.5 4.1 0.0024 17.9 4.1 1.4 1 0 0 1 1 1 1 Phage tail repeat like DUF5611 PF18446.1 NODE_76182_length_207_cov_1.691860_g68241_i0reverse_frame_2 - 0.044 14.6 0.1 0.06 14.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5611) DUF2407_C PF13373.6 NODE_76182_length_207_cov_1.691860_g68241_i0forward_frame_3 - 0.11 12.7 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain SLATT_6 PF18169.1 NODE_76177_length_207_cov_1.726744_g68236_i0reverse_frame_3 - 0.054 13.1 0.1 0.063 12.9 0.1 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 DNA_pol3_theta PF06440.11 NODE_76176_length_207_cov_1.732558_g68235_i0forward_frame_2 - 2.8e-17 62.1 0.1 3.7e-17 61.8 0.1 1.2 1 0 0 1 1 1 1 DNA polymerase III, theta subunit He_PIG PF05345.12 NODE_76176_length_207_cov_1.732558_g68235_i0forward_frame_2 - 0.29 11.3 0.3 0.47 10.7 0.3 1.2 1 0 0 1 1 1 0 Putative Ig domain ABC2_membrane PF01061.24 NODE_76173_length_207_cov_1.750000_g68232_i0forward_frame_2 - 3e-07 30.1 0.5 3.4e-07 29.9 0.5 1.0 1 0 0 1 1 1 1 ABC-2 type transporter FlgT_N PF16548.5 NODE_76171_length_207_cov_1.761628_g68230_i0reverse_frame_2 - 0.026 15.1 0.3 0.028 15.0 0.3 1.1 1 0 0 1 1 1 0 Flagellar assembly protein T, N-terminal domain Axin_b-cat_bind PF08833.10 NODE_76170_length_207_cov_1.761628_g68229_i0reverse_frame_2 - 0.26 11.4 2.5 0.23 11.6 0.9 1.8 1 1 1 2 2 2 0 Axin beta-catenin binding domain EutH PF04346.12 NODE_76169_length_207_cov_1.767442_g68228_i0forward_frame_2 - 0.019 14.2 0.7 0.021 14.0 0.7 1.0 1 0 0 1 1 1 0 Ethanolamine utilisation protein, EutH WD40 PF00400.32 NODE_76164_length_207_cov_1.779070_g68223_i0reverse_frame_2 - 4.7e-06 27.2 0.3 7.7e-06 26.6 0.3 1.4 1 1 0 1 1 1 1 WD domain, G-beta repeat Halogen_Hydrol PF10112.9 NODE_76162_length_207_cov_1.790698_g68221_i0forward_frame_2 - 0.068 13.2 0.3 0.072 13.1 0.3 1.1 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein MFS_1 PF07690.16 NODE_76155_length_207_cov_1.854651_g68214_i0reverse_frame_3 - 0.017 14.1 5.4 0.018 14.0 5.4 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily THF_DHG_CYH PF00763.23 NODE_76153_length_207_cov_1.860465_g68212_i0forward_frame_3 - 0.048 13.9 0.1 0.057 13.7 0.1 1.0 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain cNMPbd_u2 PF16643.5 NODE_76152_length_207_cov_1.860465_g68211_i0forward_frame_2 - 0.016 15.7 2.9 0.019 15.5 2.9 1.0 1 0 0 1 1 1 0 Unstructured region on cNMP-binding protein Pox_A32 PF04665.12 NODE_76150_length_207_cov_1.866279_g68209_i0forward_frame_3 - 0.06 12.8 0.1 0.061 12.8 0.1 1.1 1 0 0 1 1 1 0 Poxvirus A32 protein Med3 PF11593.8 NODE_76145_length_207_cov_1.930233_g68204_i0forward_frame_2 - 4.9 6.2 5.8 5.2 6.2 5.8 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Kinesin PF00225.23 NODE_76139_length_207_cov_1.988372_g68198_i0reverse_frame_2 - 2.4e-22 79.3 0.4 2.7e-22 79.1 0.4 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_76139_length_207_cov_1.988372_g68198_i0reverse_frame_2 - 2.7e-16 59.8 0.3 3.1e-16 59.6 0.3 1.0 1 0 0 1 1 1 1 Microtubule binding Bac_DnaA PF00308.18 NODE_76139_length_207_cov_1.988372_g68198_i0reverse_frame_2 - 0.0022 17.8 0.1 0.0025 17.7 0.1 1.0 1 0 0 1 1 1 1 Bacterial dnaA protein ResIII PF04851.15 NODE_76139_length_207_cov_1.988372_g68198_i0reverse_frame_2 - 0.046 13.7 0.1 0.052 13.6 0.1 1.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Med27 PF11571.8 NODE_76139_length_207_cov_1.988372_g68198_i0forward_frame_2 - 0.067 13.6 3.9 0.078 13.4 3.9 1.2 1 0 0 1 1 1 0 Mediator complex subunit 27 DEAD PF00270.29 NODE_76137_length_207_cov_2.029070_g68196_i0forward_frame_2 - 1.5e-11 44.4 0.0 1.6e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase SH3_7 PF12914.7 NODE_76136_length_207_cov_2.034884_g68195_i0reverse_frame_3 - 0.04 14.1 0.0 0.054 13.7 0.0 1.2 1 0 0 1 1 1 0 SH3 domain of SH3b2 type # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks364.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks364.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks364.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks364.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_C57 PF03290.13 NODE_76123_length_207_cov_2.168605_g68182_i0forward_frame_3 - 0.091 11.5 0.3 0.1 11.3 0.3 1.0 1 0 0 1 1 1 0 Vaccinia virus I7 processing peptidase DUF1509 PF07420.11 NODE_76122_length_207_cov_2.180233_g68181_i0reverse_frame_3 - 2.8 6.8 11.2 0.16 10.9 4.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1509) Imm41 PF15592.6 NODE_76121_length_207_cov_2.186047_g68180_i0reverse_frame_2 - 0.02 15.3 0.7 0.021 15.1 0.7 1.1 1 0 0 1 1 1 0 Immunity protein 41 DUF3496 PF12001.8 NODE_76119_length_207_cov_2.226744_g68178_i0reverse_frame_3 - 0.011 16.1 0.3 0.012 16.0 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) DUF1153 PF06627.11 NODE_76116_length_207_cov_2.244186_g68175_i0reverse_frame_3 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1153) DUF2193 PF09959.9 NODE_76108_length_207_cov_2.296512_g68167_i0forward_frame_2 - 0.26 9.7 0.5 0.31 9.5 0.5 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2193) Endomucin PF07010.12 NODE_76102_length_207_cov_2.348837_g68161_i0reverse_frame_2 - 0.07 13.1 0.0 0.081 12.9 0.0 1.0 1 0 0 1 1 1 0 Endomucin DUF3780 PF12635.7 NODE_76102_length_207_cov_2.348837_g68161_i0forward_frame_3 - 0.033 13.9 0.1 0.037 13.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3780) SH3_15 PF18346.1 NODE_76102_length_207_cov_2.348837_g68161_i0forward_frame_3 - 0.1 12.9 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Mind bomb SH3 repeat domain Ufd2P_core PF10408.9 NODE_76092_length_207_cov_2.447674_g68151_i0forward_frame_3 - 7.8e-17 61.1 0.2 8.1e-17 61.1 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin elongating factor core SCO1-SenC PF02630.14 NODE_76088_length_207_cov_2.517442_g68147_i0reverse_frame_3 - 4.3e-16 59.0 0.0 4.7e-16 58.9 0.0 1.0 1 0 0 1 1 1 1 SCO1/SenC DUF3994 PF13159.6 NODE_76082_length_207_cov_2.581395_g68141_i0reverse_frame_2 - 0.054 14.0 0.0 0.066 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3994) EBP PF05241.12 NODE_76079_length_207_cov_2.656977_g68138_i0reverse_frame_3 - 0.11 11.9 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 Emopamil binding protein PHO4 PF01384.20 NODE_76079_length_207_cov_2.656977_g68138_i0forward_frame_3 - 0.05 12.6 0.4 0.054 12.5 0.4 1.0 1 0 0 1 1 1 0 Phosphate transporter family ATP13 PF12921.7 NODE_76078_length_207_cov_2.662791_g68137_i0forward_frame_2 - 0.0014 18.5 0.0 0.0015 18.4 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ATPase expression Pkinase PF00069.25 NODE_76077_length_207_cov_2.726744_g68136_i0reverse_frame_2 - 6.2e-14 52.0 0.1 6.6e-14 51.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_76077_length_207_cov_2.726744_g68136_i0reverse_frame_2 - 0.015 14.5 0.0 0.015 14.5 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase TAT_signal PF10518.9 NODE_76076_length_207_cov_2.767442_g68135_i0reverse_frame_2 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence PH_11 PF15413.6 NODE_76075_length_207_cov_2.779070_g68134_i0reverse_frame_3 - 0.061 13.8 0.0 0.063 13.7 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain Cyt_bd_oxida_II PF02322.15 NODE_76073_length_207_cov_2.872093_g68132_i0forward_frame_2 - 0.00085 18.8 5.4 0.00087 18.7 5.4 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II ABG_transport PF03806.13 NODE_76073_length_207_cov_2.872093_g68132_i0forward_frame_2 - 0.035 12.3 0.7 0.039 12.2 0.7 1.0 1 0 0 1 1 1 0 AbgT putative transporter family HTH_OrfB_IS605 PF12323.8 NODE_76063_length_207_cov_3.761628_g68122_i0reverse_frame_3 - 0.095 12.2 0.1 1.4 8.5 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain DUF2284 PF10050.9 NODE_76061_length_207_cov_3.854651_g68120_i0reverse_frame_2 - 0.47 10.2 2.6 0.55 10.0 2.6 1.1 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) VirE2 PF07229.12 NODE_76058_length_207_cov_4.052326_g68117_i0forward_frame_3 - 0.15 10.7 0.0 0.16 10.6 0.0 1.0 1 0 0 1 1 1 0 VirE2 FLYWCH PF04500.16 NODE_76055_length_207_cov_17.203488_g68114_i0reverse_frame_2 - 0.12 12.4 3.8 0.22 11.7 3.8 1.4 1 0 0 1 1 1 0 FLYWCH zinc finger domain TOM20_plant PF06552.12 NODE_76054_length_207_cov_19.110465_g68113_i0reverse_frame_3 - 2.1e-05 24.3 0.2 2.3e-05 24.2 0.2 1.0 1 0 0 1 1 1 1 Plant specific mitochondrial import receptor subunit TOM20 PigN PF04987.14 NODE_76054_length_207_cov_19.110465_g68113_i0forward_frame_2 - 0.87 8.4 5.3 0.91 8.3 5.3 1.0 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) NESP55 PF06390.12 NODE_76051_length_207_cov_29.238372_g68110_i0forward_frame_2 - 0.16 11.6 2.4 0.17 11.5 2.4 1.0 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) DP PF08781.10 NODE_76050_length_207_cov_29.273256_g68109_i0reverse_frame_3 - 0.0092 15.9 0.3 0.012 15.5 0.3 1.2 1 0 0 1 1 1 1 Transcription factor DP DUF3613 PF12266.8 NODE_76049_length_207_cov_30.279070_g68108_i0forward_frame_2 - 0.077 12.8 0.8 5.6 6.8 0.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3613) Transformer PF06495.11 NODE_76048_length_207_cov_30.325581_g68107_i0reverse_frame_2 - 0.09 12.9 13.1 0.091 12.8 13.1 1.0 1 0 0 1 1 1 0 Fruit fly transformer protein Dynamitin PF04912.14 NODE_76043_length_207_cov_34.965116_g68102_i0reverse_frame_2 - 0.0036 16.7 1.7 0.0036 16.7 1.7 1.0 1 0 0 1 1 1 1 Dynamitin BRCC36_C PF18110.1 NODE_76039_length_207_cov_39.691860_g68098_i0forward_frame_2 - 0.0012 18.9 0.1 0.0013 18.8 0.1 1.1 1 0 0 1 1 1 1 BRCC36 C-terminal helical domain GCM PF03615.15 NODE_76036_length_207_cov_41.901163_g68095_i0forward_frame_3 - 0.05 13.5 0.6 0.051 13.5 0.6 1.0 1 0 0 1 1 1 0 GCM motif protein Viral_cys_rich PF08008.12 NODE_76035_length_207_cov_43.093023_g68094_i0reverse_frame_2 - 0.066 13.3 0.5 0.096 12.7 0.5 1.4 1 1 0 1 1 1 0 Viral cysteine rich Phage_holin_3_6 PF07332.11 NODE_76034_length_207_cov_43.209302_g68093_i0forward_frame_2 - 2.3 8.3 5.3 2.5 8.2 5.3 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III zf-C3HC4_5 PF17121.5 NODE_76028_length_207_cov_47.203488_g68087_i0forward_frame_3 - 0.067 13.1 0.5 0.14 12.1 0.5 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DDRGK PF09756.9 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_3 - 2.4 7.7 15.4 2.7 7.5 15.4 1.1 1 0 0 1 1 1 0 DDRGK domain DUF3886 PF13025.6 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_3 - 3.8 7.8 20.9 0.71 10.1 14.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3886) TAP42 PF04177.12 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_3 - 4.2 6.4 12.4 5.1 6.1 12.4 1.1 1 0 0 1 1 1 0 TAP42-like family Pox_Ag35 PF03286.14 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_3 - 9.7 5.9 11.7 11 5.7 11.7 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Cnd1_N PF12922.7 NODE_76025_length_207_cov_54.250000_g68084_i0reverse_frame_2 - 0.0061 16.4 0.9 0.008 16.0 0.9 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1, N-term Mito_carr PF00153.27 NODE_76022_length_207_cov_61.569767_g68081_i0reverse_frame_2 - 0.031 14.2 0.0 0.042 13.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial carrier protein DUF2275 PF10039.9 NODE_76022_length_207_cov_61.569767_g68081_i0reverse_frame_2 - 0.14 12.3 0.0 0.15 12.2 0.0 1.0 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2275) YIF1 PF03878.15 NODE_76015_length_207_cov_74.912791_g68074_i0reverse_frame_3 - 0.13 11.8 2.2 0.12 11.9 2.2 1.0 1 0 0 1 1 1 0 YIF1 MCLC PF05934.11 NODE_76015_length_207_cov_74.912791_g68074_i0forward_frame_2 - 2.6 6.7 5.7 2.4 6.8 5.7 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Uteroglobin PF01099.17 NODE_76014_length_207_cov_75.697674_g68073_i0forward_frame_2 - 0.066 13.5 3.1 0.078 13.3 3.1 1.2 1 0 0 1 1 1 0 Uteroglobin family PNTB PF02233.16 NODE_76013_length_207_cov_81.703488_g68072_i0forward_frame_2 - 0.22 10.4 0.0 0.23 10.3 0.0 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit zf-C2H2 PF00096.26 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.051 14.0 0.9 0.1 13.1 0.9 1.6 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.052 14.4 0.6 0.09 13.7 0.6 1.4 1 0 0 1 1 1 0 C2H2-type zinc finger Rsm1 PF08600.10 NODE_76000_length_207_cov_111.604651_g68059_i0forward_frame_3 - 0.27 11.4 6.8 35 4.6 6.8 2.1 1 1 0 1 1 1 0 Rsm1-like TraF PF13728.6 NODE_75998_length_207_cov_112.744186_g68057_i0forward_frame_3 - 0.035 13.9 0.7 0.042 13.7 0.7 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein NACHT PF05729.12 NODE_75996_length_207_cov_130.087209_g68055_i0forward_frame_3 - 0.066 13.1 0.4 0.075 12.9 0.4 1.0 1 0 0 1 1 1 0 NACHT domain 2OG-FeII_Oxy PF03171.20 NODE_75991_length_207_cov_228.912791_g68050_i0forward_frame_3 - 0.15 12.5 0.0 0.93 10.0 0.0 1.8 1 1 1 2 2 2 0 2OG-Fe(II) oxygenase superfamily PIGA PF08288.12 NODE_75989_length_207_cov_274.255814_g68048_i0forward_frame_3 - 0.15 12.7 0.0 0.18 12.4 0.0 1.1 1 0 0 1 1 1 0 PIGA (GPI anchor biosynthesis) NS3_envE PF02723.14 ORF9981 - 4.7 7.4 8.4 12 6.0 0.7 2.1 1 1 1 2 2 2 0 Non-structural protein NS3/Small envelope protein E Peptidase_C98 PF15499.6 ORF99768 - 0.14 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase ART PF01129.18 ORF99603 - 0.0025 17.1 0.0 0.0027 17.0 0.0 1.1 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase DUF1107 PF06526.12 ORF98774 - 1.1e-29 102.1 0.6 1.2e-29 101.9 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1107) GST_N_3 PF13417.6 ORF98599 - 0.079 13.4 0.1 0.093 13.2 0.1 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DUF4073 PF13285.6 ORF98568 - 0.1 12.2 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4073) ATPase PF06745.13 ORF98568 - 0.12 11.7 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 KaiC Ribosomal_L37ae PF01780.19 ORF98365 - 0.029 14.4 0.4 0.034 14.2 0.4 1.2 1 0 0 1 1 1 0 Ribosomal L37ae protein family DUF3557 PF12078.8 ORF98167 - 0.0058 16.6 0.2 0.0062 16.5 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3557) Sec10 PF07393.11 ORF98167 - 0.033 12.6 0.0 0.037 12.5 0.0 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec10 Pkinase PF00069.25 ORF978 - 8.8e-13 48.2 0.2 9.5e-13 48.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF978 - 9.6e-08 31.6 0.1 1e-07 31.5 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DnaJ_C PF01556.18 ORF97795 - 3.8e-05 23.8 0.5 5.3e-05 23.3 0.5 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DUF2542 PF10808.8 ORF97164 - 0.13 12.7 1.1 0.16 12.4 0.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2542) DUF2892 PF11127.8 ORF97164 - 0.18 11.8 9.9 0.32 11.1 9.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2892) MFS_1 PF07690.16 ORF97053 - 9.5e-07 28.1 7.3 1.1e-06 27.9 7.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF97053 - 4.7e-06 25.7 3.3 5e-06 25.6 3.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter TRI12 PF06609.13 ORF97053 - 0.003 16.0 0.2 0.0032 15.9 0.2 1.0 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 ORF97053 - 0.0076 14.9 3.0 0.0078 14.8 3.0 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF2938 PF11158.8 ORF97053 - 0.014 14.9 0.1 0.015 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2938) BPD_transp_1 PF00528.22 ORF96871 - 4.7e-11 42.8 1.7 5e-11 42.7 1.7 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DUF2754 PF10953.8 ORF96871 - 0.067 13.4 0.5 0.083 13.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) Renin_r PF07850.14 ORF96871 - 0.1 13.2 0.2 0.11 13.2 0.2 1.2 1 0 0 1 1 1 0 Renin receptor-like protein Synaptobrevin PF00957.21 ORF96596 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin Sulfotransfer_1 PF00685.27 ORF96218 - 4.5e-05 23.1 0.6 4.6e-05 23.0 0.6 1.0 1 0 0 1 1 1 1 Sulfotransferase domain PP2C PF00481.21 ORF96214 - 1.1e-10 41.7 0.0 1.2e-10 41.5 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DUF2793 PF10983.8 ORF96214 - 0.082 12.8 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2793) MmoB_DmpM PF02406.17 ORF96152 - 0.077 13.2 0.6 0.08 13.2 0.6 1.3 1 0 0 1 1 1 0 MmoB/DmpM family Glyco_hydro_38 PF18438.1 ORF96152 - 0.16 12.0 1.9 0.21 11.7 1.9 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal domain 1 MapZ_EC1 PF18041.1 ORF9615 - 0.001 19.3 0.6 0.0012 19.1 0.6 1.0 1 0 0 1 1 1 1 MapZ extracellular domain 1 BORA_N PF15280.6 ORF95430 - 0.054 13.1 0.0 0.062 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein aurora borealis N-terminus Kelch_5 PF13854.6 ORF95416 - 0.00063 19.7 0.0 0.00084 19.3 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 ORF95416 - 0.00076 19.7 0.0 0.00098 19.3 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 ORF95416 - 0.0042 17.1 0.0 0.005 16.8 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF95416 - 0.011 15.7 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 0 Kelch motif KxDL PF10241.9 ORF95416 - 0.012 15.9 0.0 0.012 15.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein Kelch_1 PF01344.25 ORF95416 - 0.089 12.4 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Kelch motif JAB PF01398.21 ORF95252 - 3.8e-06 26.9 0.0 3.9e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 ORF95252 - 4.5e-06 26.4 0.0 4.8e-06 26.3 0.0 1.0 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain ubiquitin PF00240.23 ORF94864 - 2.3e-06 27.2 0.1 0.00011 21.9 0.1 2.0 1 1 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF94864 - 0.00023 21.5 0.1 0.00028 21.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain zn-ribbon_14 PF16503.5 ORF94841 - 0.0028 17.1 1.7 0.0041 16.6 1.7 1.3 1 0 0 1 1 1 1 Zinc-ribbon zf-C2H2 PF00096.26 ORF94830 - 2.4e-13 49.7 8.7 1e-06 28.8 1.9 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF94830 - 3.7e-09 36.6 6.8 0.00028 21.5 1.1 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF94830 - 8e-08 32.4 12.2 3.9e-05 23.9 0.9 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF94830 - 2.1e-07 30.6 0.9 2.1e-07 30.6 0.9 2.8 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-BED PF02892.15 ORF94830 - 5.7e-05 23.1 6.6 0.0093 16.0 1.9 2.1 1 1 1 2 2 2 2 BED zinc finger zf-C2H2_11 PF16622.5 ORF94830 - 0.00013 21.7 2.7 0.0097 15.7 0.0 2.3 2 1 0 2 2 2 1 zinc-finger C2H2-type Actin_micro PF17003.5 ORF94830 - 0.00021 20.6 3.8 0.029 13.6 0.4 2.0 1 1 1 2 2 2 2 Putative actin-like family zf-met PF12874.7 ORF94830 - 0.00025 21.3 7.4 0.0072 16.7 0.4 2.6 3 0 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF94830 - 0.00031 21.0 2.6 0.059 13.7 0.2 2.0 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-Di19 PF05605.12 ORF94830 - 0.0013 19.0 4.3 0.011 16.0 4.1 2.0 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_jaz PF12171.8 ORF94830 - 0.0022 18.2 1.1 0.0022 18.2 1.1 2.4 2 1 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_3rep PF18868.1 ORF94830 - 0.0035 18.0 1.1 0.027 15.1 1.1 1.9 1 1 1 2 2 2 2 Zinc finger C2H2-type, 3 repeats PyrI_C PF02748.15 ORF94830 - 0.0087 15.9 1.7 3 7.8 0.1 2.2 2 0 0 2 2 2 2 Aspartate carbamoyltransferase regulatory chain, metal binding domain C1_2 PF03107.16 ORF94830 - 0.013 15.8 5.8 0.039 14.3 0.5 2.2 2 0 0 2 2 2 0 C1 domain zf-AN1 PF01428.16 ORF94830 - 0.042 14.0 2.8 3.2 8.0 0.1 2.4 2 0 0 2 2 2 0 AN1-like Zinc finger Ribosomal_L28 PF00830.19 ORF94830 - 0.067 13.4 1.9 0.92 9.8 0.3 2.1 1 1 1 2 2 2 0 Ribosomal L28 family zf-C2HE PF16278.5 ORF94830 - 0.075 13.5 3.9 0.11 13.0 0.7 2.1 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger HNH PF01844.23 ORF94830 - 0.11 12.7 1.8 0.89 9.8 0.1 2.1 2 0 0 2 2 2 0 HNH endonuclease zf-C2H2_6 PF13912.6 ORF94830 - 1.1 9.3 12.3 1.4 9.0 1.2 2.6 2 2 0 2 2 2 0 C2H2-type zinc finger Phage-scaffold PF09306.10 ORF94396 - 0.18 11.2 0.0 0.2 11.0 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage, scaffolding protein DUF4986 PF16375.5 ORF94308 - 0.17 12.6 0.0 0.18 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function PIEZO PF15917.5 ORF93329 - 0.025 14.1 0.1 0.031 13.8 0.1 1.2 1 1 0 1 1 1 0 Piezo IGFBP PF00219.18 ORF92987 - 0.04 14.6 3.2 0.061 14.0 3.2 1.3 1 0 0 1 1 1 0 Insulin-like growth factor binding protein VATC PF18716.1 ORF9292 - 0.023 14.5 1.1 0.038 13.8 1.1 1.3 1 0 0 1 1 1 0 Vms1-associating treble clef domain c-SKI_SMAD_bind PF08782.10 ORF9292 - 0.11 12.7 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 c-SKI Smad4 binding domain Formyl_trans_N PF00551.19 ORF92835 - 0.27 11.0 1.2 0.35 10.6 1.2 1.1 1 0 0 1 1 1 0 Formyl transferase MFS_1 PF07690.16 ORF92409 - 0.0013 17.7 1.2 0.0013 17.7 1.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily FtsX PF02687.21 ORF91167 - 1.1e-06 29.0 3.8 1.1e-06 29.0 3.8 1.5 2 0 0 2 2 2 1 FtsX-like permease family RNHCP PF12647.7 ORF9102 - 0.013 15.4 0.6 0.017 15.1 0.5 1.3 1 1 0 1 1 1 0 RNHCP domain DUF4636 PF15468.6 ORF90728 - 0.04 13.6 2.7 0.046 13.4 2.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) HTH_57 PF18679.1 ORF9070 - 0.14 12.5 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 ThcOx helix turn helix domain MRAP PF15183.6 ORF90351 - 0.082 12.9 2.1 0.11 12.4 2.1 1.2 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Leucyl-specific PF14795.6 ORF89993 - 0.00033 20.7 0.1 0.00044 20.3 0.1 1.2 1 0 0 1 1 1 1 Leucine-tRNA synthetase-specific domain Sec3_C_2 PF15278.6 ORF89765 - 0.13 12.6 0.0 0.16 12.3 0.0 1.0 1 0 0 1 1 1 0 Sec3 exocyst complex subunit Fer4_13 PF13370.6 ORF89624 - 0.041 14.4 0.0 0.085 13.4 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I PH PF00169.29 ORF8926 - 6.8e-09 36.2 0.2 7.3e-09 36.1 0.2 1.0 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF8926 - 2.8e-05 24.3 0.0 3.2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Pleckstrin homology domain PH_11 PF15413.6 ORF8926 - 0.0018 18.7 0.1 0.0019 18.6 0.1 1.1 1 0 0 1 1 1 1 Pleckstrin homology domain DUF4205 PF13898.6 ORF8926 - 0.028 13.4 0.0 0.03 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4205) TT_ORF1 PF02956.14 ORF89058 - 4.1 5.9 14.3 4 6.0 14.3 1.0 1 0 0 1 1 1 0 TT viral orf 1 Herpes_gE PF02480.16 ORF88258 - 0.064 12.0 0.4 0.071 11.9 0.4 1.1 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E SYCP2_ARLD PF18581.1 ORF88137 - 0.056 13.4 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 Synaptonemal complex 2 armadillo-repeat-like domain ATP-synt_C PF00137.21 ORF88079 - 9.4e-08 32.3 4.9 1.1e-07 32.0 4.9 1.1 1 0 0 1 1 1 1 ATP synthase subunit C mono-CXXC PF15626.6 ORF88 - 0.04 14.3 0.2 0.071 13.5 0.2 1.6 1 1 0 1 1 1 0 single CXXC unit DMAP1_like PF17024.5 ORF8798 - 0.013 15.6 0.2 0.014 15.5 0.2 1.1 1 0 0 1 1 1 0 Putative DMAP1-like C1q PF00386.21 ORF87794 - 0.046 13.9 0.1 0.047 13.9 0.1 1.1 1 0 0 1 1 1 0 C1q domain Nudix_hydro PF18290.1 ORF87794 - 0.049 13.6 0.1 0.072 13.1 0.1 1.2 1 0 0 1 1 1 0 Nudix hydrolase domain Casein PF00363.18 ORF87631 - 0.066 13.6 1.6 0.28 11.6 0.3 2.0 2 0 0 2 2 2 0 Casein PBP_N PF17093.5 ORF87327 - 0.0042 17.4 4.0 0.0049 17.1 4.0 1.1 1 0 0 1 1 1 1 Penicillin-binding protein N-terminus Mito_fiss_reg PF05308.11 ORF87327 - 0.018 15.2 1.7 0.018 15.2 1.7 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator PRIMA1 PF16101.5 ORF87327 - 0.087 12.9 6.9 0.094 12.8 6.9 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 ORF87327 - 0.37 10.2 12.2 0.41 10.1 12.2 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal VIR_N PF15912.5 ORF87327 - 0.49 9.9 3.4 0.49 10.0 3.4 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal DUF4601 PF15373.6 ORF87238 - 0.15 11.0 0.0 0.16 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4601) Tfb5 PF06331.12 ORF86810 - 9e-13 48.0 0.1 1.1e-12 47.7 0.1 1.0 1 0 0 1 1 1 1 Transcription factor TFIIH complex subunit Tfb5 DUF639 PF04842.12 ORF86596 - 0.0035 16.8 1.0 0.0035 16.8 1.0 1.3 2 0 0 2 2 2 1 Plant protein of unknown function (DUF639) Chorion_2 PF03964.15 ORF86489 - 0.28 12.0 5.9 0.29 12.0 5.9 1.2 1 0 0 1 1 1 0 Chorion family 2 MCC-bdg_PDZ PF10506.9 ORF85706 - 0.066 13.2 0.0 0.1 12.6 0.0 1.3 1 1 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Mito_carr PF00153.27 ORF85496 - 3.6e-10 39.6 0.4 3.9e-10 39.5 0.4 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein Peptidase_C98 PF15499.6 ORF85354 - 0.14 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase DUF1128 PF06569.11 ORF8525 - 0.047 13.7 2.2 0.073 13.1 1.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1128) DUF1353 PF07087.11 ORF84733 - 0.076 12.7 0.0 0.091 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1353) OrfB_IS605 PF01385.19 ORF84730 - 0.096 12.9 0.2 0.12 12.6 0.2 1.2 1 0 0 1 1 1 0 Probable transposase NIP_1 PF08995.10 ORF84718 - 0.074 13.4 0.2 0.082 13.3 0.2 1.2 1 0 0 1 1 1 0 Necrosis inducing protein-1 GRA6 PF05084.13 ORF84616 - 0.13 12.2 0.1 0.14 12.1 0.1 1.1 1 0 0 1 1 1 0 Granule antigen protein (GRA6) Pentapeptide_4 PF13599.6 ORF84404 - 0.04 14.1 0.1 0.05 13.8 0.1 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) Pkinase PF00069.25 ORF84189 - 0.031 13.7 0.0 0.031 13.7 0.0 1.0 1 0 0 1 1 1 0 Protein kinase domain FAM150 PF15129.6 ORF84189 - 0.075 13.2 0.1 0.083 13.1 0.1 1.1 1 0 0 1 1 1 0 FAM150 family Pkinase_Tyr PF07714.17 ORF84189 - 0.14 11.4 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase CD34_antigen PF06365.12 ORF83966 - 0.061 12.9 0.1 0.064 12.8 0.1 1.0 1 0 0 1 1 1 0 CD34/Podocalyxin family UPF0542 PF15086.6 ORF83862 - 0.011 15.6 0.5 0.015 15.2 0.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 Lipase3_N PF03893.16 ORF83654 - 0.13 12.3 2.1 7.4 6.7 2.1 2.1 1 1 0 1 1 1 0 Lipase 3 N-terminal region L27_2 PF09045.10 ORF83204 - 0.024 14.6 1.2 0.035 14.1 0.1 1.8 2 1 0 2 2 2 0 L27_2 DUF2798 PF11391.8 ORF82913 - 0.14 12.2 0.5 0.19 11.8 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2798) RdRP PF05183.12 ORF82720 - 6.5e-06 25.1 0.0 7.4e-06 24.9 0.0 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase mono-CXXC PF15626.6 ORF82461 - 0.04 14.3 0.2 0.071 13.5 0.2 1.6 1 1 0 1 1 1 0 single CXXC unit Chordopox_A13L PF05961.11 ORF81575 - 0.15 12.3 0.3 0.17 12.2 0.3 1.3 1 1 0 1 1 1 0 Chordopoxvirus A13L protein SSP160 PF06933.11 ORF81575 - 0.32 9.1 14.2 0.34 9.1 14.2 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Tir_receptor_C PF07489.11 ORF81575 - 6.6 6.6 11.4 8.1 6.4 11.4 1.1 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) C-terminus DUF416 PF04222.12 ORF81088 - 1.8e-20 73.1 0.6 2e-20 73.0 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF416) Ribosomal_S28e PF01200.18 ORF80817 - 9.9e-29 99.1 0.5 1.1e-28 99.0 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e WD40 PF00400.32 ORF80618 - 0.0027 18.5 0.0 0.0035 18.1 0.0 1.5 1 1 0 1 1 1 1 WD domain, G-beta repeat Synaptobrevin PF00957.21 ORF80178 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin SOR PF07682.11 ORF8015 - 0.027 13.4 0.0 0.027 13.4 0.0 1.0 1 0 0 1 1 1 0 Sulphur oxygenase reductase HalOD2 PF18547.1 ORF80108 - 0.0012 18.7 0.7 0.0012 18.7 0.7 1.8 2 0 0 2 2 2 1 Halobacterial output domain 2 Ribosomal_L39 PF00832.20 ORF79930 - 0.24 11.1 4.3 0.076 12.7 1.4 1.6 2 0 0 2 2 2 0 Ribosomal L39 protein Synaptobrevin PF00957.21 ORF78870 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin DUF1295 PF06966.12 ORF78804 - 0.0038 16.8 0.1 0.0049 16.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) RIIa PF02197.17 ORF78801 - 0.016 14.9 0.1 2.9 7.6 0.0 2.3 2 0 0 2 2 2 0 Regulatory subunit of type II PKA R-subunit Gram_pos_anchor PF00746.21 ORF78625 - 0.092 12.7 1.6 0.11 12.4 1.6 1.2 1 0 0 1 1 1 0 LPXTG cell wall anchor motif CcmD PF04995.14 ORF78625 - 1 9.5 9.3 1.3 9.1 9.3 1.2 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) TBPIP PF07106.13 ORF7856 - 0.014 15.3 0.7 0.055 13.4 0.7 1.8 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain Sterile PF03015.19 ORF7856 - 0.03 14.6 0.1 0.036 14.3 0.1 1.2 1 0 0 1 1 1 0 Male sterility protein PduV-EutP PF10662.9 ORF7856 - 0.03 14.1 0.1 0.035 13.8 0.1 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation RPN7 PF10602.9 ORF7856 - 0.13 11.9 0.1 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 26S proteasome subunit RPN7 7tm_6 PF02949.20 ORF78372 - 0.025 13.6 0.2 0.03 13.4 0.2 1.0 1 0 0 1 1 1 0 7tm Odorant receptor mono-CXXC PF15626.6 ORF78283 - 0.04 14.3 0.2 0.071 13.5 0.2 1.6 1 1 0 1 1 1 0 single CXXC unit Peptidase_C98 PF15499.6 ORF78209 - 0.14 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase PNK3P PF08645.11 ORF77874 - 0.22 11.2 4.4 0.22 11.2 4.4 1.1 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase DUF1590 PF07629.11 ORF77706 - 0.0045 16.8 2.1 0.13 12.1 0.4 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF1590) RE_Bpu10I PF09549.10 ORF77642 - 0.023 14.3 0.4 0.024 14.2 0.4 1.0 1 0 0 1 1 1 0 Bpu10I restriction endonuclease DivIC PF04977.15 ORF77585 - 0.13 12.1 3.0 0.14 12.0 2.4 1.4 1 1 0 1 1 1 0 Septum formation initiator DUF5532 PF17673.1 ORF77495 - 0.044 13.8 0.9 0.059 13.4 0.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5532) MscL PF01741.18 ORF77317 - 0.07 13.4 0.1 0.078 13.3 0.1 1.0 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL PsbH PF00737.20 ORF77317 - 0.15 11.8 0.3 0.22 11.3 0.3 1.3 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein Microtub_bd PF16796.5 ORF77292 - 0.061 13.3 0.4 0.064 13.2 0.4 1.1 1 0 0 1 1 1 0 Microtubule binding DUF2385 PF09539.10 ORF7704 - 0.065 13.8 0.1 0.071 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2385) Wound_ind PF08186.11 ORF76716 - 0.016 15.6 0.1 0.016 15.6 0.1 1.6 2 0 0 2 2 2 0 Wound-inducible basic protein family DUF3736 PF12540.8 ORF76716 - 0.023 14.8 0.1 0.024 14.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3736) C8 PF08742.11 ORF76633 - 0.068 13.6 3.3 0.093 13.2 3.4 1.3 1 1 0 1 1 1 0 C8 domain DUF1455 PF07306.11 ORF76417 - 0.001 19.0 0.5 0.0011 18.9 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1455) DUF1295 PF06966.12 ORF75982 - 0.0037 16.8 0.1 0.0049 16.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Med16 PF11635.8 ORF75931 - 0.0085 14.1 0.2 0.0087 14.0 0.2 1.0 1 0 0 1 1 1 1 Mediator complex subunit 16 Rad21_Rec8 PF04824.16 ORF74620 - 0.44 9.9 1.0 0.78 9.1 0.0 1.8 3 0 0 3 3 3 0 Conserved region of Rad21 / Rec8 like protein BMC PF00936.19 ORF74201 - 2.9e-10 40.0 0.0 3.3e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 BMC domain Basic PF01586.16 ORF74008 - 0.13 13.4 1.8 0.18 13.0 1.8 1.2 1 0 0 1 1 1 0 Myogenic Basic domain Adeno_E1B_55K_N PF04623.12 ORF73763 - 0.066 13.9 0.9 0.066 13.9 0.9 1.5 2 0 0 2 2 2 0 Adenovirus E1B protein N-terminus cobW PF02492.19 ORF73646 - 0.079 12.5 0.0 0.087 12.4 0.0 1.0 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Pep_deformylase PF01327.21 ORF73487 - 7.2e-08 32.2 0.1 8.5e-08 32.0 0.1 1.1 1 0 0 1 1 1 1 Polypeptide deformylase TcpS PF17456.2 ORF73241 - 0.0026 17.8 0.3 0.003 17.6 0.3 1.0 1 0 0 1 1 1 1 Toxin-coregulated pilus protein S BChl_A PF02327.17 ORF73241 - 0.017 13.9 0.0 0.018 13.8 0.0 1.0 1 0 0 1 1 1 0 Bacteriochlorophyll A protein Trefoil PF00088.18 ORF73056 - 0.028 14.3 0.8 0.036 14.0 0.8 1.3 1 0 0 1 1 1 0 Trefoil (P-type) domain Pkinase PF00069.25 ORF73040 - 4.2e-20 72.2 0.1 4.5e-20 72.1 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73040 - 1.7e-10 40.7 0.0 1.7e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF73040 - 2.7e-07 30.1 0.0 3e-07 30.0 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF73040 - 0.00016 21.7 0.0 0.00016 21.7 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF73040 - 0.0015 17.9 0.0 0.0015 17.9 0.0 1.0 1 0 0 1 1 1 1 Kinase-like RIO1 PF01163.22 ORF73040 - 0.0018 17.9 0.1 0.0018 17.9 0.1 1.0 1 0 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF73040 - 0.0023 16.8 0.3 0.0024 16.7 0.3 1.0 1 0 0 1 1 1 1 Fungal protein kinase Choline_kinase PF01633.20 ORF73040 - 0.0079 15.8 0.0 0.0086 15.7 0.0 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase DUF1679 PF07914.11 ORF73040 - 0.014 14.2 0.0 0.014 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) EcKinase PF02958.20 ORF73040 - 0.021 14.1 0.0 0.022 14.1 0.0 1.1 1 0 0 1 1 1 0 Ecdysteroid kinase FTA2 PF13095.6 ORF73040 - 0.022 14.4 0.0 0.024 14.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 YrbL-PhoP_reg PF10707.9 ORF73040 - 0.089 12.3 0.0 0.096 12.2 0.0 1.0 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Cob_adeno_trans PF01923.18 ORF73001 - 0.2 11.8 2.8 0.22 11.6 2.8 1.1 1 0 0 1 1 1 0 Cobalamin adenosyltransferase Cas_Csx8 PF09657.10 ORF72949 - 0.0061 15.6 0.1 0.0064 15.6 0.1 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Csx8 (Cas_Csx8) DUF21 PF01595.20 ORF72630 - 9 6.0 8.3 10 5.8 8.3 1.0 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain PilP PF04351.13 ORF72546 - 0.049 13.6 0.1 0.054 13.5 0.1 1.0 1 0 0 1 1 1 0 Pilus assembly protein, PilP Vta1 PF04652.16 ORF72286 - 0.1 12.6 3.0 0.11 12.4 3.0 1.0 1 0 0 1 1 1 0 Vta1 like Ribosomal_S11 PF00411.19 ORF72286 - 0.2 12.1 2.6 0.22 11.9 2.6 1.1 1 0 0 1 1 1 0 Ribosomal protein S11 DUF3486 PF11985.8 ORF72286 - 2.3 8.6 11.6 2.7 8.4 11.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) DUF2786 PF10979.8 ORF72286 - 2.5 8.1 16.9 25 4.9 16.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2786) HK97-gp10_like PF04883.12 ORF72286 - 7.3 7.7 9.4 14 6.8 9.4 1.6 1 1 0 1 1 1 0 Bacteriophage HK97-gp10, putative tail-component DUF1455 PF07306.11 ORF71932 - 0.0049 16.8 2.3 0.0053 16.7 2.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1455) NDK PF00334.19 ORF7144 - 1.1e-12 48.1 0.0 1.2e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Oxidored_molyb PF00174.19 ORF71347 - 0.064 12.9 0.2 0.069 12.8 0.2 1.0 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain Ribosomal_L40e PF01020.17 ORF71347 - 0.069 13.0 3.2 0.069 13.0 3.2 1.5 1 1 0 1 1 1 0 Ribosomal L40e family DUF4714 PF15833.5 ORF70816 - 0.18 11.8 0.7 0.21 11.6 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) Nucleoside_tran PF01733.18 ORF70797 - 2.2e-15 56.9 0.0 2.4e-15 56.7 0.0 1.0 1 0 0 1 1 1 1 Nucleoside transporter DUF3216 PF11505.8 ORF70797 - 0.17 12.1 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3216) Glyco_hydro_31 PF01055.26 ORF70734 - 1.1e-16 61.1 0.2 1.1e-16 61.1 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Antimicrobial_5 PF08026.11 ORF70734 - 0.14 12.2 1.2 0.23 11.5 1.2 1.3 1 0 0 1 1 1 0 Bee antimicrobial peptide DivIC PF04977.15 ORF70489 - 0.13 12.1 3.0 0.14 12.0 2.4 1.4 1 1 0 1 1 1 0 Septum formation initiator Macscav_rec PF03523.13 ORF70130 - 0.31 11.0 2.5 0.69 9.9 1.0 2.0 2 0 0 2 2 2 0 Macrophage scavenger receptor DB_JBP1 PF18526.1 ORF70124 - 1.2 9.0 4.4 1.4 8.8 4.4 1.2 1 0 0 1 1 1 0 Thymine dioxygenase JBP1 DNA-binding domain DUF4808 PF16066.5 ORF70117 - 0.088 13.4 0.0 0.096 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4808) TBCA PF02970.16 ORF70046 - 7.8e-16 58.2 6.3 8.7e-16 58.0 6.3 1.0 1 0 0 1 1 1 1 Tubulin binding cofactor A DHR10 PF18595.1 ORF70046 - 0.0021 18.1 3.7 0.0022 18.0 3.7 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain bZIP_1 PF00170.21 ORF70046 - 0.08 13.0 3.6 0.14 12.3 3.6 1.3 1 0 0 1 1 1 0 bZIP transcription factor PFO_beta_C PF12367.8 ORF70046 - 0.25 11.5 2.7 2.1 8.6 2.4 2.2 1 1 0 1 1 1 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal MFS_1 PF07690.16 ORF6916 - 9.5e-07 28.1 7.3 1.1e-06 27.9 7.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF6916 - 4.7e-06 25.7 3.3 5e-06 25.6 3.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter TRI12 PF06609.13 ORF6916 - 0.003 16.0 0.2 0.0032 15.9 0.2 1.0 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 ORF6916 - 0.0076 14.9 3.0 0.0078 14.8 3.0 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF2938 PF11158.8 ORF6916 - 0.014 14.9 0.1 0.015 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2938) Mpp10 PF04006.12 ORF68654 - 0.0051 15.3 0.0 0.0056 15.2 0.0 1.0 1 0 0 1 1 1 1 Mpp10 protein zf-CCHC_6 PF15288.6 ORF68268 - 0.094 12.6 0.5 0.094 12.6 0.5 1.9 2 0 0 2 2 2 0 Zinc knuckle YqfQ PF14181.6 ORF68143 - 0.11 12.7 4.1 0.13 12.4 4.1 1.0 1 0 0 1 1 1 0 YqfQ-like protein DUF1128 PF06569.11 ORF68129 - 0.053 13.5 2.4 0.074 13.0 2.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1128) Baculo_LEF-10 PF07206.11 ORF68129 - 0.16 12.2 0.8 0.21 11.8 0.7 1.3 1 1 0 1 1 1 0 Baculovirus late expression factor 10 (LEF-10) DUF2312 PF10073.9 ORF67940 - 0.04 13.6 1.1 2.4 7.9 0.0 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Basic PF01586.16 ORF67749 - 0.13 13.4 1.8 0.18 13.0 1.8 1.2 1 0 0 1 1 1 0 Myogenic Basic domain Whib PF02467.16 ORF67425 - 0.069 13.7 0.0 0.1 13.2 0.0 1.2 1 0 0 1 1 1 0 Transcription factor WhiB CN_hydrolase PF00795.22 ORF67213 - 0.06 12.7 0.1 0.068 12.5 0.1 1.0 1 0 0 1 1 1 0 Carbon-nitrogen hydrolase Radical_SAM PF04055.21 ORF67180 - 0.084 13.2 0.8 0.091 13.1 0.8 1.1 1 0 0 1 1 1 0 Radical SAM superfamily Pox_A12 PF04651.13 ORF67129 - 0.95 9.5 7.3 1.1 9.3 7.3 1.2 1 0 0 1 1 1 0 Poxvirus A12 protein DUF4403 PF14356.6 ORF66944 - 0.05 12.3 0.1 0.059 12.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4403) DUF5532 PF17673.1 ORF66886 - 0.044 13.8 0.9 0.059 13.4 0.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5532) Collectrin PF16959.5 ORF66783 - 0.085 12.6 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter Nop PF01798.18 ORF65787 - 0.033 13.7 0.0 0.039 13.4 0.0 1.2 1 0 0 1 1 1 0 snoRNA binding domain, fibrillarin MMS22L_N PF14910.6 ORF65631 - 1.3 7.4 6.4 1.3 7.4 6.4 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal Aquarius_N PF16399.5 ORF65291 - 0.049 11.7 0.1 0.051 11.6 0.1 1.0 1 0 0 1 1 1 0 Intron-binding protein aquarius N-terminus Med3 PF11593.8 ORF6521 - 0.26 10.5 0.0 0.26 10.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF2312 PF10073.9 ORF65083 - 0.04 13.6 1.1 2.4 7.9 0.0 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) DUF2205 PF10224.9 ORF64946 - 3.4e-09 36.6 1.6 3.7e-09 36.5 1.6 1.0 1 0 0 1 1 1 1 Short coiled-coil protein TACC_C PF05010.14 ORF64946 - 0.015 15.1 1.1 0.017 15.0 1.1 1.0 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF4200 PF13863.6 ORF64946 - 0.033 14.6 0.8 0.042 14.3 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) YabA PF06156.13 ORF64946 - 0.048 14.3 0.4 0.053 14.2 0.4 1.2 1 0 0 1 1 1 0 Initiation control protein YabA MMS22L_N PF14910.6 ORF64355 - 1.3 7.4 6.4 1.3 7.4 6.4 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal FtsX PF02687.21 ORF64349 - 1.1e-06 29.0 3.8 1.1e-06 29.0 3.8 1.5 2 0 0 2 2 2 1 FtsX-like permease family Pec_lyase_N PF04431.13 ORF64085 - 0.089 13.0 0.3 0.12 12.6 0.3 1.2 1 0 0 1 1 1 0 Pectate lyase, N terminus TRM13 PF05206.14 ORF63816 - 2.3e-07 30.6 0.0 2.6e-07 30.5 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase TRM13 Nucleoporin_N PF08801.11 ORF63789 - 0.15 10.8 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Nup133 N terminal like MtrD PF04207.12 ORF63772 - 0.025 14.3 0.0 0.026 14.2 0.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit D Pkinase PF00069.25 ORF63732 - 0.00011 21.7 0.1 0.00011 21.6 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Fe_hyd_SSU PF02256.17 ORF63732 - 0.0086 16.1 0.3 0.3 11.2 0.1 2.1 2 0 0 2 2 2 1 Iron hydrogenase small subunit DUF4843 PF16132.5 ORF63732 - 0.074 12.6 0.1 0.076 12.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4843) XRCC1_N PF01834.16 ORF63466 - 0.0012 18.8 0.0 0.0015 18.6 0.0 1.0 1 0 0 1 1 1 1 XRCC1 N terminal domain Sortilin-Vps10 PF15902.5 ORF62371 - 0.00013 20.9 0.1 0.00015 20.7 0.1 1.0 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, BNR PF02012.20 ORF62371 - 0.041 13.9 1.8 0.92 9.8 0.4 2.6 2 0 0 2 2 2 0 BNR/Asp-box repeat DUF4601 PF15373.6 ORF62249 - 0.15 11.0 0.0 0.16 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4601) DUF2299 PF10061.9 ORF62180 - 0.11 12.2 0.0 0.13 12.0 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2299) RETICULATA-like PF11891.8 ORF62151 - 0.067 13.0 0.0 0.069 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein RETICULATA-related RRM_1 PF00076.22 ORF61592 - 0.049 13.5 0.2 0.062 13.1 0.2 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MIP PF00230.20 ORF61326 - 3.6e-09 36.7 1.0 3.9e-09 36.6 1.0 1.0 1 0 0 1 1 1 1 Major intrinsic protein FtsX PF02687.21 ORF61176 - 1.1e-06 29.0 3.8 1.1e-06 29.0 3.8 1.5 2 0 0 2 2 2 1 FtsX-like permease family Glucosamine_iso PF01182.20 ORF60408 - 0.00015 21.7 0.0 0.00015 21.7 0.0 1.0 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VCBS PF13517.6 ORF59802 - 0.028 15.0 0.1 0.031 14.9 0.1 1.1 1 0 0 1 1 1 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RNHCP PF12647.7 ORF58868 - 0.013 15.4 0.6 0.017 15.1 0.5 1.3 1 1 0 1 1 1 0 RNHCP domain Syntaxin-18_N PF10496.9 ORF58834 - 0.073 13.3 0.1 0.092 13.0 0.1 1.3 1 1 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus Nha1_C PF08619.10 ORF58315 - 0.09 12.0 1.1 0.1 11.8 1.1 1.0 1 0 0 1 1 1 0 Alkali metal cation/H+ antiporter Nha1 C terminus CSTF1_dimer PF16699.5 ORF5814 - 0.098 12.4 0.3 0.13 12.1 0.3 1.2 1 0 0 1 1 1 0 Cleavage stimulation factor subunit 1, dimerisation domain GSHPx PF00255.19 ORF58067 - 0.25 10.9 0.2 0.78 9.3 0.1 1.8 1 1 1 2 2 2 0 Glutathione peroxidase MORN PF02493.20 ORF57996 - 8e-10 38.0 8.2 1.3e-06 28.0 1.0 2.4 2 0 0 2 2 2 2 MORN repeat 4HPAD_g_N PF18671.1 ORF57818 - 0.038 13.7 0.4 0.068 12.9 0.4 1.3 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal GTP_EFTU_D3 PF03143.17 ORF57586 - 2.2e-21 76.3 0.1 2.4e-21 76.2 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain CBP_BcsS PF17036.5 ORF57410 - 0.28 11.1 2.6 1.5 8.7 0.2 2.0 1 1 1 2 2 2 0 Cellulose biosynthesis protein BcsS # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks365.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks365.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks365.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks365.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Glyco_hydro_31 PF01055.26 ORF57114 - 7.5e-18 64.9 0.4 7.8e-18 64.9 0.4 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 VWA_N2 PF16164.5 ORF5674 - 0.032 14.4 0.2 0.041 14.0 0.2 1.1 1 0 0 1 1 1 0 VWA N-terminal Kinesin PF00225.23 ORF56707 - 0.012 14.5 0.0 0.012 14.5 0.0 1.0 1 0 0 1 1 1 0 Kinesin motor domain Cas_Csx8 PF09657.10 ORF5662 - 0.0061 15.6 0.1 0.0064 15.6 0.1 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Csx8 (Cas_Csx8) DUF2530 PF10745.9 ORF56580 - 0.026 14.7 0.3 0.091 13.0 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2530) BRCA2 PF00634.18 ORF56580 - 0.47 10.2 1.5 0.64 9.7 1.5 1.2 1 0 0 1 1 1 0 BRCA2 repeat DUF3450 PF11932.8 ORF55887 - 0.45 9.8 7.9 0.47 9.7 7.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1639 PF07797.14 ORF55842 - 0.12 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) ECH_1 PF00378.20 ORF55837 - 2.1e-06 27.2 0.0 2.2e-06 27.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase M11L PF11099.8 ORF55767 - 0.028 14.7 0.0 0.029 14.7 0.0 1.0 1 0 0 1 1 1 0 Apoptosis regulator M11L like FKS1_dom1 PF14288.6 ORF55468 - 0.14 12.5 0.8 0.24 11.8 0.8 1.4 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 Sulfotransfer_2 PF03567.14 ORF55241 - 0.031 14.2 0.1 0.032 14.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family DSPc PF00782.20 ORF55106 - 0.00019 21.3 0.0 0.0002 21.2 0.0 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF55106 - 0.18 11.4 0.3 0.18 11.3 0.3 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Nop PF01798.18 ORF5500 - 0.033 13.7 0.0 0.039 13.4 0.0 1.2 1 0 0 1 1 1 0 snoRNA binding domain, fibrillarin UPF0253 PF06786.12 ORF54916 - 0.066 13.5 0.0 0.077 13.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0253) mono-CXXC PF15626.6 ORF5486 - 0.04 14.3 0.2 0.071 13.5 0.2 1.6 1 1 0 1 1 1 0 single CXXC unit SNAP PF14938.6 ORF54856 - 6.7e-06 25.7 0.6 7.3e-06 25.6 0.6 1.1 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP HOOK PF05622.12 ORF54675 - 0.23 9.6 0.0 0.27 9.4 0.0 1.0 1 0 0 1 1 1 0 HOOK protein ANAPC10 PF03256.16 ORF54324 - 2.3e-12 46.9 0.0 2.7e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Anaphase-promoting complex, subunit 10 (APC10) Ribosomal_L37ae PF01780.19 ORF54253 - 0.029 14.4 0.4 0.034 14.2 0.4 1.2 1 0 0 1 1 1 0 Ribosomal L37ae protein family FIIND PF13553.6 ORF53750 - 0.13 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Function to find Herpes_LMP1 PF05297.11 ORF53253 - 0.34 10.1 1.3 0.37 9.9 1.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) SNF2_N PF00176.23 ORF53173 - 6.7e-11 41.5 0.0 7.1e-11 41.4 0.0 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF1027 PF06265.11 ORF53173 - 0.11 12.5 0.2 0.28 11.2 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1027) DEAD PF00270.29 ORF53173 - 0.15 11.8 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase FAM150 PF15129.6 ORF53038 - 0.022 14.9 0.3 0.023 14.9 0.3 1.1 1 0 0 1 1 1 0 FAM150 family DUF4914 PF16260.5 ORF53038 - 0.095 10.8 0.7 0.098 10.7 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4914) GFO_IDH_MocA PF01408.22 ORF53038 - 0.18 12.6 0.0 0.19 12.5 0.0 1.1 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Gemini_BL1 PF00845.19 ORF52643 - 0.16 11.5 0.1 0.16 11.5 0.1 1.0 1 0 0 1 1 1 0 Geminivirus BL1 movement protein DUF5470 PF17564.2 ORF52643 - 0.22 11.8 2.4 0.26 11.5 2.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5470) AtpR PF12966.7 ORF52637 - 0.065 13.7 1.0 0.13 12.8 0.8 1.5 1 1 1 2 2 2 0 N-ATPase, AtpR subunit MMgT PF10270.9 ORF52400 - 0.068 13.5 0.1 0.083 13.3 0.1 1.1 1 0 0 1 1 1 0 Membrane magnesium transporter MHYT PF03707.16 ORF5239 - 0.045 13.9 0.2 0.054 13.7 0.2 1.3 1 0 0 1 1 1 0 Bacterial signalling protein N terminal repeat SidC_N PF18219.1 ORF5238 - 0.021 13.8 0.0 0.021 13.8 0.0 1.0 1 0 0 1 1 1 0 SidC N-terminal domain DUF1211 PF06736.11 ORF5233 - 0.048 14.1 0.3 0.063 13.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) LLC1 PF14945.6 ORF52228 - 0.0058 17.2 0.1 0.0068 17.0 0.1 1.1 1 0 0 1 1 1 1 Normal lung function maintenance, Low in Lung Cancer 1 protein CCD48 PF15799.5 ORF52228 - 0.095 11.0 0.2 0.097 11.0 0.2 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 Synaptobrevin PF00957.21 ORF51718 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin DUF2207 PF09972.9 ORF5078 - 0.13 11.0 3.8 0.12 11.1 3.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1129 PF06570.11 ORF5078 - 0.19 11.2 3.8 0.17 11.3 3.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Pex24p PF06398.11 ORF5078 - 9.6 5.1 6.4 9.4 5.1 6.4 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Collectrin PF16959.5 ORF50641 - 0.085 12.6 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter Bap31 PF05529.12 ORF50439 - 0.05 13.5 0.1 0.05 13.5 0.1 1.1 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region Glyco_transf_7N PF13733.6 ORF50163 - 0.084 12.5 0.1 0.084 12.5 0.1 1.2 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 DUF3144 PF11342.8 ORF49991 - 0.081 13.2 0.0 0.092 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3144) Viral_DNA_bp PF00747.17 ORF49509 - 2 5.5 3.3 2.2 5.4 3.3 1.0 1 0 0 1 1 1 0 ssDNA binding protein SAE2 PF08573.10 ORF4943 - 0.13 13.4 5.8 0.15 13.2 5.8 1.1 1 0 0 1 1 1 0 DNA repair protein endonuclease SAE2/CtIP C-terminus FtsX PF02687.21 ORF49409 - 1.1e-06 29.0 3.8 1.1e-06 29.0 3.8 1.5 2 0 0 2 2 2 1 FtsX-like permease family CUTL PF16557.5 ORF4863 - 0.046 13.9 0.3 0.055 13.6 0.3 1.2 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB AbiEi_4 PF13338.6 ORF48092 - 0.1 12.8 0.0 0.13 12.4 0.0 1.4 1 1 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin DUF4462 PF14692.6 ORF48092 - 0.22 11.0 0.3 0.22 11.0 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4462) Sgf11_N PF18519.1 ORF47945 - 1.1 8.9 6.5 6.4 6.4 0.3 2.7 2 1 1 3 3 3 0 SAGA-associated factor 11 N-terminal domain Sgf11_N PF18519.1 ORF47911 - 1.1 8.9 6.5 6.4 6.4 0.3 2.7 2 1 1 3 3 3 0 SAGA-associated factor 11 N-terminal domain Tetraspanin PF00335.20 ORF47692 - 0.33 10.6 5.5 0.36 10.5 5.5 1.0 1 0 0 1 1 1 0 Tetraspanin family DUF4091 PF13320.6 ORF47673 - 0.047 13.8 0.2 0.048 13.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4091) Ribosomal_S28e PF01200.18 ORF46939 - 9.9e-29 99.1 0.5 1.1e-28 99.0 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e FG-GAP PF01839.23 ORF46596 - 4.5e-05 23.5 0.0 6.8e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 FG-GAP repeat VCBS PF13517.6 ORF46596 - 0.0014 19.2 0.0 0.0014 19.2 0.0 1.3 1 0 0 1 1 1 1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella Metallothio_Cad PF07846.11 ORF46439 - 0.088 12.9 2.1 0.088 12.9 2.1 1.8 2 0 0 2 2 2 0 Metallothionein family MMS22L_N PF14910.6 ORF46152 - 1.3 7.4 6.4 1.3 7.4 6.4 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal cobW PF02492.19 ORF46111 - 0.079 12.5 0.0 0.087 12.4 0.0 1.0 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Aldose_epim PF01263.20 ORF46076 - 5.3e-05 22.7 0.0 5.3e-05 22.7 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase rve_3 PF13683.6 ORF45722 - 0.02 14.6 0.3 0.021 14.6 0.3 1.3 1 1 0 1 1 1 0 Integrase core domain MMS22L_N PF14910.6 ORF45641 - 1.3 7.4 6.4 1.3 7.4 6.4 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal TMF_TATA_bd PF12325.8 ORF45352 - 4.8e-05 23.6 1.5 0.00012 22.3 1.5 1.5 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Dynactin_p22 PF07426.11 ORF45352 - 0.0039 17.1 1.3 0.0045 16.9 1.3 1.1 1 0 0 1 1 1 1 Dynactin subunit p22 RST PF12174.8 ORF45352 - 0.018 14.9 1.4 0.025 14.5 1.4 1.2 1 0 0 1 1 1 0 RCD1-SRO-TAF4 (RST) plant domain TMF_DNA_bd PF12329.8 ORF45352 - 0.044 13.8 5.9 0.046 13.7 5.9 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding TylF PF05711.11 ORF45352 - 0.059 12.6 0.5 0.061 12.6 0.5 1.0 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) DivIC PF04977.15 ORF45352 - 0.06 13.1 3.9 0.08 12.7 3.9 1.3 1 1 0 1 1 1 0 Septum formation initiator XhlA PF10779.9 ORF45352 - 0.096 12.9 2.2 0.12 12.6 2.2 1.2 1 0 0 1 1 1 0 Haemolysin XhlA TMPIT PF07851.13 ORF45352 - 0.12 11.6 3.4 0.13 11.5 3.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein TcdB_N PF12918.7 ORF45352 - 0.58 10.5 6.7 2.4 8.5 0.8 2.1 1 1 1 2 2 2 0 TcdB toxin N-terminal helical domain DUF4389 PF14333.6 ORF4532 - 0.041 13.8 0.5 0.046 13.7 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4389) Ank_2 PF12796.7 ORF45000 - 2e-12 47.5 0.1 2.3e-12 47.3 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF45000 - 4.4e-10 39.5 0.0 0.00055 20.3 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF45000 - 2.3e-09 37.6 0.1 2.9e-09 37.3 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF45000 - 2e-08 33.8 0.0 0.0001 22.4 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF45000 - 7.2e-07 29.4 1.1 3.5e-05 24.0 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) RAMP4 PF06624.12 ORF44706 - 0.011 15.8 1.6 0.014 15.4 1.6 1.3 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 CCDC106 PF15794.5 ORF44690 - 0.97 9.1 5.4 0.9 9.2 5.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Secretin_N_2 PF07655.13 ORF44690 - 6.2 7.4 21.2 7.3 7.2 21.2 1.1 1 0 0 1 1 1 0 Secretin N-terminal domain DUF4614 PF15391.6 ORF44690 - 6.6 6.7 15.6 6.9 6.6 15.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) oligo_HPY PF08352.12 ORF44543 - 0.073 13.6 0.0 0.097 13.2 0.0 1.2 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region zf-Tim10_DDP PF02953.15 ORF43842 - 1.8e-09 37.1 2.4 2e-09 36.9 2.4 1.0 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Rubredoxin_2 PF18073.1 ORF43826 - 0.029 14.1 1.2 0.046 13.4 1.2 1.3 1 0 0 1 1 1 0 Rubredoxin metal binding domain Zn_ribbon_SprT PF17283.2 ORF43826 - 0.086 12.8 2.5 0.19 11.7 2.5 1.5 1 0 0 1 1 1 0 SprT-like zinc ribbon domain DUF4064 PF13273.6 ORF43263 - 0.0033 17.7 0.1 0.0033 17.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) SNARE PF05739.19 ORF43263 - 0.32 11.0 0.4 0.32 11.0 0.4 1.7 2 0 0 2 2 2 0 SNARE domain Collectrin PF16959.5 ORF4313 - 0.085 12.6 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter DMAP1_like PF17024.5 ORF42928 - 0.013 15.6 0.2 0.014 15.5 0.2 1.1 1 0 0 1 1 1 0 Putative DMAP1-like Pex24p PF06398.11 ORF42718 - 1.1 8.2 3.2 1.2 8.1 3.2 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Tat PF00539.18 ORF42283 - 0.022 14.9 0.1 0.029 14.5 0.1 1.2 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) URO-D PF01208.17 ORF42206 - 3.8e-22 78.9 0.1 3.8e-22 78.9 0.1 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) GMP_PDE_delta PF05351.11 ORF42167 - 1.7e-17 63.9 0.1 1.8e-17 63.8 0.1 1.0 1 0 0 1 1 1 1 GMP-PDE, delta subunit MHYT PF03707.16 ORF4214 - 0.026 14.7 1.3 0.033 14.3 1.3 1.3 1 0 0 1 1 1 0 Bacterial signalling protein N terminal repeat CedA PF10729.9 ORF4214 - 0.23 11.3 0.1 0.31 10.9 0.1 1.2 1 0 0 1 1 1 0 Cell division activator CedA SLATT_5 PF18160.1 ORF4214 - 3.2 7.0 7.3 6.5 6.0 7.3 1.6 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 RNA_POL_M_15KD PF02150.16 ORF41982 - 0.1 12.5 1.1 0.16 11.9 1.1 1.4 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit BESS PF02944.20 ORF41946 - 0.053 13.4 0.1 0.086 12.7 0.1 1.4 1 0 0 1 1 1 0 BESS motif DUF1110 PF06533.12 ORF41850 - 0.053 13.5 0.1 0.056 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1110) VATC PF18716.1 ORF41570 - 0.008 16.0 1.0 0.013 15.4 1.0 1.3 1 0 0 1 1 1 1 Vms1-associating treble clef domain Cupin_7 PF12973.7 ORF4156 - 0.12 12.3 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 ChrR Cupin-like domain bZIP_Maf PF03131.17 ORF41416 - 0.083 13.4 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 bZIP Maf transcription factor Dpy-30 PF05186.13 ORF41130 - 4.1e-14 52.0 0.0 5e-14 51.7 0.0 1.1 1 0 0 1 1 1 1 Dpy-30 motif RIIa PF02197.17 ORF41130 - 0.1 12.3 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit DUF3993 PF13158.6 ORF41017 - 0.043 14.0 0.3 0.068 13.4 0.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3993) XPG_N PF00752.17 ORF41017 - 0.084 13.4 0.1 0.089 13.3 0.1 1.1 1 0 0 1 1 1 0 XPG N-terminal domain C2 PF00168.30 ORF40835 - 3.6e-16 59.3 0.1 3.9e-16 59.2 0.1 1.0 1 0 0 1 1 1 1 C2 domain CEP76-C2 PF15627.6 ORF40835 - 0.00033 20.2 0.0 0.00034 20.2 0.0 1.1 1 0 0 1 1 1 1 CEP76 C2 domain TMEM61 PF15105.6 ORF40835 - 0.044 13.6 0.0 0.045 13.6 0.0 1.0 1 0 0 1 1 1 0 TMEM61 protein family EIIBC-GUT_C PF07663.11 ORF40778 - 0.0016 18.6 0.1 0.0041 17.2 0.0 1.6 1 1 1 2 2 2 1 Sorbitol phosphotransferase enzyme II C-terminus DUF4847 PF16139.5 ORF40704 - 0.03 14.2 0.1 0.032 14.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4847) SRRM_C PF15230.6 ORF40114 - 1.9 9.1 8.1 5.5 7.6 2.3 2.1 1 1 1 2 2 2 0 Serine/arginine repetitive matrix protein C-terminus BDV_P10 PF06515.11 ORF39534 - 0.022 14.8 0.7 0.025 14.6 0.7 1.1 1 0 0 1 1 1 0 Borna disease virus P10 protein Ham1p_like PF01725.16 ORF39353 - 9.8e-10 38.6 0.0 1e-09 38.6 0.0 1.0 1 0 0 1 1 1 1 Ham1 family DUF3236 PF11576.8 ORF39353 - 0.071 12.8 0.1 0.079 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3236) TetR_C_12 PF16914.5 ORF39092 - 0.1 12.8 0.2 0.18 12.0 0.2 1.4 1 1 0 1 1 1 0 Bacterial transcriptional repressor C-terminal KleE PF17394.2 ORF38391 - 0.035 14.3 0.1 0.043 14.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein Meis_PKNOX_N PF16493.5 ORF38150 - 2.8 8.3 5.7 1.9 8.9 0.4 2.1 1 1 1 2 2 2 0 N-terminal of Homeobox Meis and PKNOX1 MMS1_N PF10433.9 ORF3799 - 0.034 12.8 0.0 0.034 12.8 0.0 1.0 1 0 0 1 1 1 0 Mono-functional DNA-alkylating methyl methanesulfonate N-term Pkinase PF00069.25 ORF37346 - 2e-09 37.2 0.0 2.1e-09 37.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF37346 - 9e-07 28.4 0.0 9e-07 28.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Lip_prot_lig_C PF10437.9 ORF37346 - 0.059 13.4 0.6 0.074 13.0 0.2 1.5 1 1 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus Crystall_3 PF08964.10 ORF37293 - 0.058 13.6 0.1 0.08 13.1 0.1 1.1 1 0 0 1 1 1 0 Beta/Gamma crystallin Viral_DNA_bp PF00747.17 ORF37249 - 2 5.5 3.3 2.2 5.4 3.3 1.0 1 0 0 1 1 1 0 ssDNA binding protein mono-CXXC PF15626.6 ORF37215 - 0.04 14.3 0.2 0.071 13.5 0.2 1.6 1 1 0 1 1 1 0 single CXXC unit Comm PF15957.5 ORF37004 - 1.5 9.2 4.2 2.2 8.7 4.2 1.3 1 0 0 1 1 1 0 Commissureless mono-CXXC PF15626.6 ORF36988 - 0.04 14.3 0.2 0.071 13.5 0.2 1.6 1 1 0 1 1 1 0 single CXXC unit HEPN_AbiV PF18728.1 ORF36880 - 0.0047 17.1 0.1 0.0051 17.0 0.1 1.1 1 0 0 1 1 1 1 AbiV PLC-beta_C PF08703.10 ORF36372 - 0.0055 16.7 1.3 0.0074 16.3 1.3 1.2 1 0 0 1 1 1 1 PLC-beta C terminal PilX_N PF14341.6 ORF36226 - 0.23 11.4 0.1 0.38 10.7 0.1 1.3 1 0 0 1 1 1 0 PilX N-terminal DUF2080 PF09853.9 ORF35580 - 0.05 13.4 0.0 0.067 13.0 0.0 1.2 1 0 0 1 1 1 0 Putative transposon-encoded protein (DUF2080) YidD PF01809.18 ORF35210 - 0.00028 20.7 0.4 0.00034 20.4 0.4 1.3 1 0 0 1 1 1 1 Putative membrane protein insertion efficiency factor HSP70 PF00012.20 ORF34637 - 5.6e-10 38.0 0.0 6.7e-10 37.8 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein DUF3732 PF12532.8 ORF34366 - 0.2 11.2 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3732) RanGAP1_C PF07834.11 ORF34101 - 0.092 12.4 0.0 0.096 12.3 0.0 1.1 1 0 0 1 1 1 0 RanGAP1 C-terminal domain Arf PF00025.21 ORF33625 - 5.7e-10 38.9 0.1 6.2e-10 38.8 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 ORF33625 - 0.0088 16.0 0.1 0.011 15.7 0.1 1.1 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain GTP_EFTU PF00009.27 ORF33625 - 0.014 15.0 0.0 0.017 14.6 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Ras PF00071.22 ORF33625 - 0.062 12.9 0.0 0.069 12.7 0.0 1.1 1 0 0 1 1 1 0 Ras family ERO1 PF04137.15 ORF33581 - 6.6e-07 28.9 0.1 8.9e-07 28.4 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) HEPN_RES_NTD1 PF18870.1 ORF33581 - 0.079 13.1 0.2 0.12 12.6 0.2 1.3 1 0 0 1 1 1 0 HEPN/RES N-terminal domain 1 cobW PF02492.19 ORF33383 - 0.079 12.5 0.0 0.087 12.4 0.0 1.0 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Laminin_EGF PF00053.24 ORF32047 - 0.064 13.4 1.3 0.2 11.8 1.3 1.9 1 1 0 1 1 1 0 Laminin EGF domain CDC50 PF03381.15 ORF31240 - 0.056 12.9 0.0 0.058 12.9 0.0 1.1 1 0 0 1 1 1 0 LEM3 (ligand-effect modulator 3) family / CDC50 family DcpS_C PF11969.8 ORF30686 - 0.00073 20.0 0.1 0.00081 19.9 0.1 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding HIT PF01230.23 ORF30686 - 0.1 13.4 0.2 0.1 13.3 0.2 1.2 1 0 0 1 1 1 0 HIT domain DUF429 PF04250.13 ORF30618 - 0.097 12.4 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF429) Rax2 PF12768.7 ORF30233 - 0.15 11.5 0.2 0.15 11.5 0.2 1.1 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Imm57 PF15596.6 ORF29585 - 0.046 14.1 0.2 0.06 13.7 0.2 1.2 1 0 0 1 1 1 0 Immunity protein 57 RseC_MucC PF04246.12 ORF29292 - 0.96 9.4 4.8 1.1 9.2 4.8 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC CBF_beta PF02312.17 ORF29022 - 0.1 12.2 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 Core binding factor beta subunit HxlR PF01638.17 ORF28420 - 0.14 12.0 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF3844 PF12955.7 ORF2796 - 0.019 15.1 3.1 0.023 14.8 3.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) PAN_2 PF08276.11 ORF2796 - 0.05 13.7 2.2 0.061 13.4 2.2 1.2 1 0 0 1 1 1 0 PAN-like domain LCE6A PF15858.5 ORF27930 - 0.022 15.5 0.4 0.03 15.1 0.2 1.3 1 1 0 1 1 1 0 Late cornified envelope protein 6A family FCH PF00611.23 ORF27636 - 0.05 13.9 0.1 0.057 13.7 0.1 1.2 1 0 0 1 1 1 0 Fes/CIP4, and EFC/F-BAR homology domain MLTD_N PF06474.12 ORF26318 - 0.03 14.5 0.1 0.065 13.4 0.1 1.6 1 0 0 1 1 1 0 MltD lipid attachment motif DUF3648 PF12364.8 ORF26200 - 0.057 13.6 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3648) DUF4596 PF15363.6 ORF26192 - 0.43 10.8 3.5 3.8 7.8 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4596) adh_short_C2 PF13561.6 ORF25952 - 6.6e-09 35.7 0.0 7.4e-09 35.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF4064 PF13273.6 ORF25925 - 0.0036 17.5 0.2 0.0036 17.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) DUF1972 PF09314.11 ORF25925 - 0.092 12.3 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1972) SNARE PF05739.19 ORF25925 - 0.24 11.4 0.1 0.24 11.4 0.1 1.7 2 0 0 2 2 2 0 SNARE domain MMS22L_N PF14910.6 ORF25917 - 1.3 7.4 6.4 1.3 7.4 6.4 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal DegS PF05384.11 ORF25752 - 0.012 15.1 0.4 0.013 15.0 0.4 1.1 1 0 0 1 1 1 0 Sensor protein DegS Spec3 PF15795.5 ORF25751 - 3.4e-09 37.1 12.2 3.2e-07 30.8 12.2 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein TM2 PF05154.16 ORF25751 - 0.3 11.4 6.1 1.1 9.6 5.4 1.9 2 0 0 2 2 2 0 TM2 domain Collectrin PF16959.5 ORF24404 - 0.085 12.6 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter TniQ PF06527.11 ORF23985 - 0.0083 16.9 0.2 0.0083 16.8 0.2 1.1 1 0 0 1 1 1 1 TniQ Crystall_3 PF08964.10 ORF23828 - 0.058 13.6 0.1 0.08 13.1 0.1 1.1 1 0 0 1 1 1 0 Beta/Gamma crystallin Homez PF11569.8 ORF23591 - 0.1 12.1 0.4 0.19 11.2 0.3 1.5 1 1 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez Homeobox_KN PF05920.11 ORF23591 - 0.16 11.9 0.1 0.23 11.4 0.1 1.3 1 0 0 1 1 1 0 Homeobox KN domain Resistin PF06954.11 ORF23313 - 2.7 8.6 8.6 1.2 9.7 6.8 1.5 1 1 1 2 2 2 0 Resistin DNA_repr_REX1B PF14966.6 ORF2310 - 0.091 13.4 0.0 0.1 13.3 0.0 1.2 1 0 0 1 1 1 0 DNA repair REX1-B 4HPAD_g_N PF18671.1 ORF22737 - 0.037 13.7 0.4 0.068 12.9 0.4 1.4 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal Jag_N PF14804.6 ORF21982 - 0.00017 21.8 0.6 0.00031 21.0 0.6 1.5 1 0 0 1 1 1 1 Jag N-terminus Rotavirus_VP1 PF12289.8 ORF21982 - 0.062 12.3 0.2 0.07 12.2 0.2 1.0 1 0 0 1 1 1 0 Rotavirus VP1 C-terminal domain Mo25 PF08569.11 ORF21486 - 1.3e-07 31.3 1.5 1.3e-07 31.3 1.5 1.0 1 0 0 1 1 1 1 Mo25-like DUF1864 PF08933.11 ORF21046 - 0.092 11.5 0.0 0.095 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1864) LIP1 PF15904.5 ORF20442 - 0.04 14.3 0.6 0.046 14.1 0.6 1.2 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 VGCC_beta4Aa_N PF12052.8 ORF19742 - 0.053 13.6 0.0 0.093 12.9 0.0 1.4 1 0 0 1 1 1 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal E2 PF08199.11 ORF19539 - 0.12 12.3 0.2 0.22 11.5 0.2 1.3 1 0 0 1 1 1 0 Bacteriophage E2-like protein LCAT PF02450.15 ORF18817 - 0.2 10.8 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase DUF5532 PF17673.1 ORF18546 - 0.044 13.8 0.9 0.059 13.4 0.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5532) MDMPI_N PF11716.8 ORF18521 - 0.053 14.2 0.3 0.058 14.1 0.3 1.0 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain LCE6A PF15858.5 ORF1828 - 0.022 15.5 0.4 0.03 15.1 0.2 1.3 1 1 0 1 1 1 0 Late cornified envelope protein 6A family JAB PF01398.21 ORF17494 - 3.8e-06 26.9 0.0 3.9e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 ORF17494 - 4.5e-06 26.4 0.0 4.8e-06 26.3 0.0 1.0 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain IL4_i_Ig PF18258.1 ORF17477 - 0.076 13.2 0.0 0.46 10.7 0.0 1.9 1 1 1 2 2 2 0 Interleukin-4 inducing immunoglobulin-binding domain Orthoreo_P10 PF07204.11 ORF16774 - 0.011 15.6 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DUF1856 PF08983.10 ORF16762 - 0.057 13.7 2.6 2.7 8.3 0.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1856) FBA PF04300.13 ORF16762 - 0.14 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 F-box associated region DUF3586 PF12131.8 ORF16757 - 0.028 14.6 0.5 0.032 14.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3586) Crystall_3 PF08964.10 ORF16106 - 0.058 13.6 0.1 0.08 13.1 0.1 1.1 1 0 0 1 1 1 0 Beta/Gamma crystallin DUF2165 PF09933.9 ORF16086 - 0.12 12.4 1.8 0.13 12.3 1.8 1.2 1 0 0 1 1 1 0 Predicted small integral membrane protein (DUF2165) EF-hand_1 PF00036.32 ORF16038 - 1.5e-12 46.1 0.1 3.5e-06 26.2 0.0 2.1 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF16038 - 1.4e-10 40.2 0.1 5e-05 22.9 0.1 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF16038 - 5.8e-10 39.5 0.0 7.1e-10 39.2 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF16038 - 1.5e-07 31.2 0.1 2.6e-07 30.4 0.0 1.4 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF16038 - 6.7e-07 28.5 0.2 0.0073 15.8 0.0 2.4 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF16038 - 0.01 16.2 0.0 0.011 16.1 0.0 1.0 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF16038 - 0.035 14.0 0.1 0.036 14.0 0.1 1.3 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand TetR_C_6 PF13977.6 ORF15742 - 0.011 16.0 0.3 0.012 15.8 0.3 1.1 1 0 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal Orthopox_35kD PF02250.15 ORF15657 - 0.034 13.8 0.0 0.037 13.7 0.0 1.0 1 0 0 1 1 1 0 35kD major secreted virus protein DUF572 PF04502.13 ORF15365 - 2.1e-18 67.1 2.1 2.3e-18 66.9 2.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) YABBY PF04690.13 ORF1520 - 0.024 15.2 0.4 0.032 14.8 0.3 1.2 1 1 0 1 1 1 0 YABBY protein Aconitase_C PF00694.19 ORF1520 - 0.032 14.6 0.0 0.035 14.4 0.0 1.1 1 0 0 1 1 1 0 Aconitase C-terminal domain RGS12_usC PF16612.5 ORF14976 - 0.084 13.3 0.0 0.095 13.1 0.0 1.0 1 0 0 1 1 1 0 C-terminal unstructured region of RGS12 Gp_dh_C PF02800.20 ORF14931 - 0.038 13.6 0.0 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Erf4 PF10256.9 ORF14245 - 0.032 14.4 0.0 0.033 14.3 0.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family Sda PF08970.10 ORF13787 - 0.054 13.2 1.0 0.088 12.6 1.0 1.3 1 0 0 1 1 1 0 Sporulation inhibitor A DGF-1_5 PF11038.8 ORF1365 - 0.048 13.0 0.7 0.056 12.8 0.7 1.0 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 Pkinase PF00069.25 ORF13623 - 9.6e-19 67.8 0.0 9.6e-19 67.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13623 - 5e-10 39.1 0.0 5e-10 39.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF13623 - 0.002 17.0 0.0 0.0021 16.9 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF13623 - 0.0027 17.1 0.0 0.0027 17.1 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF13623 - 0.029 13.7 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF13623 - 0.048 12.6 0.0 0.05 12.5 0.0 1.0 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 ORF13623 - 0.051 13.5 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF13623 - 0.16 10.9 0.0 0.16 10.9 0.0 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Tht1 PF04163.12 ORF13618 - 0.0062 15.4 0.4 0.0063 15.3 0.4 1.0 1 0 0 1 1 1 1 Tht1-like nuclear fusion protein DUF2719 PF10891.8 ORF13618 - 0.049 13.5 0.1 0.064 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2719) Ntox27 PF15531.6 ORF13026 - 0.084 12.8 0.0 0.091 12.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 27 Baculo_PEP_N PF04512.12 ORF12972 - 0.095 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, N terminus GHL6 PF14871.6 ORF12184 - 0.22 11.7 1.9 0.25 11.5 1.9 1.1 1 0 0 1 1 1 0 Hypothetical glycosyl hydrolase 6 Sec20 PF03908.13 ORF112473 - 0.00042 20.2 0.8 0.00044 20.1 0.8 1.0 1 0 0 1 1 1 1 Sec20 DASH_Duo1 PF08651.10 ORF112473 - 0.034 13.9 0.4 0.038 13.8 0.4 1.2 1 0 0 1 1 1 0 DASH complex subunit Duo1 RasGAP_C PF03836.15 ORF112473 - 0.07 13.3 0.3 0.074 13.2 0.3 1.1 1 0 0 1 1 1 0 RasGAP C-terminus DUF1295 PF06966.12 ORF112197 - 0.0043 16.6 0.3 0.0052 16.3 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) CDH-cyt PF16010.5 ORF112197 - 0.054 13.2 0.0 0.054 13.2 0.0 1.0 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase mono-CXXC PF15626.6 ORF111640 - 0.04 14.3 0.2 0.071 13.5 0.2 1.6 1 1 0 1 1 1 0 single CXXC unit Dehydratase_MU PF02288.15 ORF11121 - 0.15 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Dehydratase medium subunit MORN PF02493.20 ORF110959 - 3.6e-08 32.8 5.3 0.00026 20.7 1.0 2.4 2 0 0 2 2 2 2 MORN repeat TMF_TATA_bd PF12325.8 ORF110490 - 4.8e-05 23.6 1.5 0.00012 22.3 1.5 1.5 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Dynactin_p22 PF07426.11 ORF110490 - 0.0039 17.1 1.3 0.0045 16.9 1.3 1.1 1 0 0 1 1 1 1 Dynactin subunit p22 RST PF12174.8 ORF110490 - 0.018 14.9 1.4 0.025 14.5 1.4 1.2 1 0 0 1 1 1 0 RCD1-SRO-TAF4 (RST) plant domain TMF_DNA_bd PF12329.8 ORF110490 - 0.044 13.8 5.9 0.046 13.7 5.9 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding TylF PF05711.11 ORF110490 - 0.059 12.6 0.5 0.061 12.6 0.5 1.0 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) DivIC PF04977.15 ORF110490 - 0.06 13.1 3.9 0.08 12.7 3.9 1.3 1 1 0 1 1 1 0 Septum formation initiator XhlA PF10779.9 ORF110490 - 0.096 12.9 2.2 0.12 12.6 2.2 1.2 1 0 0 1 1 1 0 Haemolysin XhlA TMPIT PF07851.13 ORF110490 - 0.12 11.6 3.4 0.13 11.5 3.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein TcdB_N PF12918.7 ORF110490 - 0.58 10.5 6.7 2.4 8.5 0.8 2.1 1 1 1 2 2 2 0 TcdB toxin N-terminal helical domain Tat PF00539.18 ORF110447 - 0.022 14.9 0.1 0.029 14.5 0.1 1.2 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) mono-CXXC PF15626.6 ORF110366 - 0.04 14.3 0.2 0.071 13.5 0.2 1.6 1 1 0 1 1 1 0 single CXXC unit DLIC PF05783.11 ORF110249 - 5.4e-16 58.5 0.0 5.7e-16 58.4 0.0 1.0 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) DUF1406 PF07190.11 ORF109672 - 0.02 14.8 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1406) DUF2517 PF10725.9 ORF109619 - 2.1e-34 117.1 3.0 2.3e-34 116.9 3.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2517) DUF3959 PF13105.6 ORF109619 - 0.078 12.5 0.2 0.084 12.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Ig_6 PF18452.1 ORF109219 - 0.026 14.1 0.1 0.28 10.8 0.1 2.1 1 1 0 1 1 1 0 Immunoglobulin domain DUF1922 PF09082.10 ORF109190 - 0.042 14.1 0.8 0.051 13.9 0.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1922) Barstar PF01337.18 ORF109058 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Barstar (barnase inhibitor) TRM13 PF05206.14 ORF108875 - 2.3e-07 30.6 0.0 2.6e-07 30.5 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase TRM13 Synaptobrevin PF00957.21 ORF108854 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin PHD PF00628.29 ORF108775 - 0.018 15.0 5.4 0.018 15.0 5.4 2.0 1 1 1 2 2 2 0 PHD-finger UvrD_C PF13361.6 ORF108760 - 0.12 11.7 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain WD40 PF00400.32 ORF108640 - 0.0027 18.5 0.0 0.0035 18.1 0.0 1.5 1 1 0 1 1 1 1 WD domain, G-beta repeat SDP_N PF12278.8 ORF108632 - 0.019 15.1 1.3 0.022 14.9 1.3 1.1 1 0 0 1 1 1 0 Sex determination protein N terminal RyR PF02026.16 ORF108632 - 0.095 12.9 0.2 0.1 12.8 0.2 1.1 1 0 0 1 1 1 0 RyR domain DUF1353 PF07087.11 ORF108494 - 0.076 12.7 0.0 0.091 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1353) DNA_pol_lambd_f PF10391.9 ORF108464 - 0.077 12.8 0.0 0.23 11.3 0.0 1.7 1 1 1 2 2 2 0 Fingers domain of DNA polymerase lambda LapA_dom PF06305.11 ORF107665 - 0.36 10.7 1.7 0.56 10.1 1.7 1.4 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain mono-CXXC PF15626.6 ORF107596 - 0.04 14.3 0.2 0.071 13.5 0.2 1.6 1 1 0 1 1 1 0 single CXXC unit RAMP4 PF06624.12 ORF107501 - 8.7e-21 73.8 0.1 1e-20 73.6 0.1 1.0 1 0 0 1 1 1 1 Ribosome associated membrane protein RAMP4 DUF1206 PF06724.11 ORF107501 - 0.052 13.6 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) DUF5321 PF17254.2 ORF107501 - 0.057 12.8 0.0 0.06 12.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5321) DUF3700 PF12481.8 ORF107241 - 0.09 12.2 0.2 0.094 12.1 0.2 1.0 1 0 0 1 1 1 0 Aluminium induced protein Dpy-30 PF05186.13 ORF107194 - 0.0019 17.8 0.0 0.003 17.2 0.0 1.4 1 1 0 1 1 1 1 Dpy-30 motif DUF5586 PF17824.1 ORF107194 - 0.061 12.4 0.0 0.061 12.4 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5586) Syja_N PF02383.18 ORF107180 - 1.1e-11 44.6 2.0 1.2e-11 44.6 2.0 1.0 1 0 0 1 1 1 1 SacI homology domain RPM2 PF08579.11 ORF107180 - 0.018 15.5 0.2 0.022 15.2 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribonuclease P subunit (RPM2) DUF5305 PF17231.2 ORF107180 - 0.034 13.6 0.2 0.036 13.5 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Stomoxyn PF11585.8 ORF107180 - 0.078 13.0 0.9 0.28 11.2 0.3 1.9 2 0 0 2 2 2 0 Insect antimicrobial peptide, stomoxyn TACC_C PF05010.14 ORF107180 - 0.096 12.5 1.4 0.098 12.4 1.4 1.0 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Herpes_IE68 PF02479.16 ORF106875 - 0.0025 17.4 0.2 0.0028 17.3 0.2 1.1 1 0 0 1 1 1 1 Herpesvirus immediate early protein MFS_1 PF07690.16 ORF106477 - 0.00017 20.6 4.6 0.00018 20.6 4.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily LRR_4 PF12799.7 ORF105852 - 7.6e-12 45.2 7.0 6.6e-07 29.6 0.3 2.1 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF105852 - 1.6e-08 34.2 0.3 2.1e-08 33.8 0.3 1.1 1 0 0 1 1 1 1 Leucine rich repeat LRR_1 PF00560.33 ORF105852 - 0.0031 17.8 0.5 0.28 11.9 0.3 2.6 2 1 0 2 2 2 1 Leucine Rich Repeat LRR_6 PF13516.6 ORF105852 - 0.0069 16.4 0.9 0.056 13.5 0.2 2.4 2 0 0 2 2 2 1 Leucine Rich repeat TMPIT PF07851.13 ORF105347 - 0.024 13.9 0.3 0.026 13.8 0.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein LacI PF00356.21 ORF105347 - 0.11 12.3 0.5 2.3 8.1 0.2 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family DUF842 PF05811.13 ORF10409 - 0.0014 18.4 0.6 0.0016 18.1 0.6 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF842) DUF4974 PF16344.5 ORF103730 - 0.0023 17.9 1.1 0.0098 15.9 0.2 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4974) Vps4_C PF09336.10 ORF103730 - 0.016 15.2 0.0 0.02 14.9 0.0 1.1 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain MCC-bdg_PDZ PF10506.9 ORF102428 - 0.066 13.2 0.0 0.1 12.6 0.0 1.3 1 1 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome LIP1 PF15904.5 ORF10214 - 0.04 14.3 0.6 0.046 14.1 0.6 1.2 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 DGF-1_5 PF11038.8 ORF101942 - 0.048 13.0 0.7 0.056 12.8 0.7 1.0 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 DUF4022 PF13214.6 ORF101907 - 0.0083 16.4 0.3 0.01 16.1 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4022) DUF3586 PF12131.8 ORF101348 - 0.028 14.6 0.5 0.032 14.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3586) DUF1110 PF06533.12 ORF100839 - 0.053 13.5 0.1 0.056 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1110) INCA1 PF15142.6 ORF10083 - 0.068 13.2 2.9 0.07 13.2 2.9 1.0 1 0 0 1 1 1 0 INCA1 zf-C2H2_9 PF16293.5 ORF100725 - 0.06 13.2 0.6 0.083 12.7 0.6 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) NES_C_h PF18208.1 ORF100656 - 0.043 14.1 0.8 0.049 13.9 0.8 1.1 1 0 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain Apc13p PF05839.11 ORF100222 - 0.058 13.6 0.0 0.067 13.4 0.0 1.2 1 0 0 1 1 1 0 Apc13p protein Myb_DNA-bind_6 PF13921.6 ORF100027 - 1.3e-09 38.1 6.0 1.3e-07 31.7 2.5 1.9 1 1 1 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 ORF100027 - 4e-09 36.5 3.2 4.4e-05 23.6 0.4 2.1 2 0 0 2 2 2 2 Myb-like DNA-binding domain DUF1072 PF06380.11 NODE_79599_length_199_cov_0.963415_g71658_i0reverse_frame_1 - 0.021 14.7 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) DUF5311 PF17238.2 NODE_79595_length_199_cov_0.969512_g71654_i0forward_frame_1 - 0.047 13.6 0.1 0.054 13.4 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5311) PTEN_C2 PF10409.9 NODE_79595_length_199_cov_0.969512_g71654_i0forward_frame_1 - 0.073 12.8 0.1 0.081 12.7 0.1 1.1 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein Toxin_GhoT_OrtT PF10753.9 NODE_79588_length_199_cov_0.969512_g71647_i0forward_frame_1 - 0.15 12.3 2.8 0.21 11.8 2.8 1.1 1 0 0 1 1 1 0 Toxin GhoT_OrtT Bac_export_2 PF01312.19 NODE_79584_length_199_cov_0.975610_g71643_i0forward_frame_1 - 0.055 12.7 0.2 0.059 12.6 0.2 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family Rho_Binding PF08912.11 NODE_79581_length_199_cov_0.975610_g71640_i0reverse_frame_1 - 0.033 15.0 4.1 0.041 14.7 4.1 1.0 1 0 0 1 1 1 0 Rho Binding TAF8_C PF10406.9 NODE_79561_length_199_cov_0.975610_g71620_i0reverse_frame_1 - 0.00044 20.7 1.0 0.00082 19.9 1.0 1.5 1 0 0 1 1 1 1 Transcription factor TFIID complex subunit 8 C-term RIH_assoc PF08454.11 NODE_79556_length_199_cov_0.975610_g71615_i0reverse_frame_1 - 0.0066 16.3 0.0 0.0066 16.3 0.0 1.1 1 0 0 1 1 1 1 RyR and IP3R Homology associated CAMSAP_CH PF11971.8 NODE_79556_length_199_cov_0.975610_g71615_i0reverse_frame_1 - 0.04 13.8 0.0 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 CAMSAP CH domain Pkinase PF00069.25 NODE_79543_length_199_cov_0.975610_g71602_i0reverse_frame_1 - 3e-13 49.7 0.0 3.2e-13 49.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_79543_length_199_cov_0.975610_g71602_i0reverse_frame_1 - 7.5e-06 25.4 0.0 7.8e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DHQ_synthase PF01761.20 NODE_79534_length_199_cov_0.975610_g71593_i0reverse_frame_1 - 1.6e-17 63.6 0.1 1.8e-17 63.4 0.1 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase SNF2_N PF00176.23 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.00025 19.9 0.0 0.00026 19.8 0.0 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.012 15.6 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit DUF2075 PF09848.9 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.035 13.4 0.0 0.035 13.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DEAD_2 PF06733.15 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.076 12.6 0.0 0.089 12.4 0.0 1.1 1 0 0 1 1 1 0 DEAD_2 DEAD PF00270.29 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.14 11.9 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase PapG_N PF03627.13 NODE_79521_length_199_cov_1.024390_g71580_i0reverse_frame_1 - 0.18 11.5 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 PapG carbohydrate binding domain Integrase_Zn PF02022.19 NODE_79514_length_199_cov_1.054878_g71573_i0reverse_frame_1 - 0.014 15.3 1.4 0.027 14.4 1.4 1.5 1 0 0 1 1 1 0 Integrase Zinc binding domain IncE PF17627.2 NODE_79514_length_199_cov_1.054878_g71573_i0reverse_frame_1 - 0.067 13.2 0.1 0.076 13.0 0.1 1.1 1 0 0 1 1 1 0 Inclusion membrane protein E PSGP PF07276.11 NODE_79499_length_199_cov_1.121951_g71558_i0reverse_frame_1 - 5 7.7 6.1 2.1 8.9 1.2 2.1 2 0 0 2 2 2 0 Apopolysialoglycoprotein (PSGP) DUF4381 PF14316.6 NODE_79491_length_199_cov_1.176829_g71550_i0reverse_frame_1 - 0.013 15.8 0.0 0.014 15.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Kinocilin PF15033.6 NODE_79491_length_199_cov_1.176829_g71550_i0reverse_frame_1 - 3.9 7.1 6.7 0.87 9.2 3.7 1.4 1 1 1 2 2 2 0 Kinocilin protein PIF6 PF05341.11 NODE_79486_length_199_cov_1.207317_g71545_i0reverse_frame_1 - 0.067 13.3 0.1 0.086 13.0 0.1 1.1 1 0 0 1 1 1 0 Per os infectivity factor 6 DUF237 PF03072.14 NODE_79485_length_199_cov_1.207317_g71544_i0reverse_frame_1 - 0.14 12.2 0.0 0.16 12.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF237) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks366.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks366.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks366.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks366.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:26:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aminotran_1_2 PF00155.21 NODE_79465_length_199_cov_1.237805_g71524_i0forward_frame_1 - 0.17 11.0 0.1 0.2 10.8 0.1 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II UPF0121 PF03661.13 NODE_79463_length_199_cov_1.243902_g71522_i0reverse_frame_1 - 0.003 17.0 2.9 0.0032 16.9 2.9 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0121) COG7 PF10191.9 NODE_79463_length_199_cov_1.243902_g71522_i0forward_frame_1 - 0.036 12.3 0.0 0.042 12.1 0.0 1.0 1 0 0 1 1 1 0 Golgi complex component 7 (COG7) SUV3_C PF12513.8 NODE_79460_length_199_cov_1.274390_g71519_i0forward_frame_1 - 0.65 10.0 3.9 0.54 10.2 2.3 1.6 2 0 0 2 2 2 0 Mitochondrial degradasome RNA helicase subunit C terminal LtuB PF17455.2 NODE_79454_length_199_cov_1.317073_g71513_i0reverse_frame_1 - 0.027 15.1 0.0 9.9 6.9 0.1 2.0 1 1 1 2 2 2 0 Late transcription unit B TTKRSYEDQ PF10212.9 NODE_79448_length_199_cov_1.341463_g71507_i0reverse_frame_1 - 0.6 9.0 2.3 0.75 8.7 2.3 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein RICTOR_M PF14666.6 NODE_79448_length_199_cov_1.341463_g71507_i0forward_frame_1 - 0.016 14.9 0.7 0.02 14.6 0.7 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain Vert_HS_TF PF06546.11 NODE_79448_length_199_cov_1.341463_g71507_i0forward_frame_1 - 0.027 14.2 0.3 0.029 14.0 0.3 1.0 1 0 0 1 1 1 0 Vertebrate heat shock transcription factor BRX PF08381.11 NODE_79438_length_199_cov_1.365854_g71497_i0forward_frame_1 - 0.1 12.0 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 DUF5359 PF17313.2 NODE_79426_length_199_cov_1.445122_g71485_i0reverse_frame_1 - 0.043 13.8 0.7 0.05 13.6 0.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5359) Ses_B PF17046.5 NODE_79425_length_199_cov_1.451220_g71484_i0forward_frame_1 - 0.039 13.9 0.1 0.058 13.4 0.1 1.1 1 0 0 1 1 1 0 SesB domain on fungal death-pathway protein CENP-B_dimeris PF09026.10 NODE_79423_length_199_cov_1.457317_g71482_i0reverse_frame_1 - 0.094 13.1 0.9 0.13 12.7 0.9 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain zf_UBZ PF18439.1 NODE_79418_length_199_cov_1.457317_g71477_i0reverse_frame_1 - 0.015 14.9 1.5 1.8 8.2 0.1 2.4 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger FYVE_2 PF02318.16 NODE_79418_length_199_cov_1.457317_g71477_i0reverse_frame_1 - 0.077 13.2 9.9 0.089 13.0 9.9 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger HTH_50 PF18024.1 NODE_79416_length_199_cov_1.457317_g71475_i0reverse_frame_1 - 0.042 13.5 0.0 6.3 6.5 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain Death PF00531.22 NODE_79416_length_199_cov_1.457317_g71475_i0reverse_frame_1 - 0.079 13.1 0.0 0.17 12.0 0.0 1.6 1 1 1 2 2 2 0 Death domain Duffy_binding PF05424.11 NODE_79410_length_199_cov_1.463415_g71469_i0reverse_frame_1 - 0.013 15.5 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Duffy binding domain PPR PF01535.20 NODE_79410_length_199_cov_1.463415_g71469_i0reverse_frame_1 - 0.077 13.3 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 PPR repeat Trp_repressor PF01371.19 NODE_79410_length_199_cov_1.463415_g71469_i0reverse_frame_1 - 0.085 13.0 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Trp repressor protein Phage_Treg PF04761.12 NODE_79405_length_199_cov_1.463415_g71464_i0reverse_frame_1 - 0.061 13.4 0.0 0.082 13.0 0.0 1.3 1 0 0 1 1 1 0 Lactococcus bacteriophage putative transcription regulator Terminase_4 PF05119.12 NODE_79403_length_199_cov_1.463415_g71462_i0forward_frame_1 - 0.12 12.9 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Phage terminase, small subunit SipA PF09052.10 NODE_79403_length_199_cov_1.463415_g71462_i0forward_frame_1 - 0.12 11.9 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 SipA N-terminal domain DUF2911 PF11138.8 NODE_79391_length_199_cov_1.487805_g71450_i0reverse_frame_1 - 0.03 14.2 0.2 0.032 14.1 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2911) Chal_sti_synt_N PF00195.19 NODE_79389_length_199_cov_1.506098_g71448_i0reverse_frame_1 - 0.071 12.5 0.6 0.079 12.4 0.6 1.0 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain Antimicrobial18 PF08130.11 NODE_79385_length_199_cov_1.524390_g71444_i0reverse_frame_1 - 0.015 15.4 0.0 0.021 14.9 0.0 1.3 1 0 0 1 1 1 0 Type A lantibiotic family F-box PF00646.33 NODE_79381_length_199_cov_1.536585_g71440_i0reverse_frame_1 - 0.15 12.0 0.1 4.6 7.2 0.0 2.3 3 0 0 3 3 3 0 F-box domain DUF5506 PF17611.2 NODE_79380_length_199_cov_1.554878_g71439_i0reverse_frame_1 - 0.018 14.9 0.1 0.018 14.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5506) AC_N PF16214.5 NODE_79379_length_199_cov_1.554878_g71438_i0forward_frame_1 - 0.21 10.7 1.1 0.22 10.6 1.1 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Plus-3 PF03126.18 NODE_79372_length_199_cov_1.615854_g71431_i0reverse_frame_1 - 0.12 12.9 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 Plus-3 domain CRIC_ras_sig PF10534.9 NODE_79361_length_199_cov_1.664634_g71420_i0forward_frame_1 - 0.095 12.9 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Connector enhancer of kinase suppressor of ras Pap_E4 PF02711.14 NODE_79360_length_199_cov_1.695122_g71419_i0reverse_frame_1 - 0.74 10.8 4.1 9.8 7.2 0.3 2.0 1 1 1 2 2 2 0 E4 protein DUF4552 PF15089.6 NODE_79356_length_199_cov_1.701220_g71415_i0reverse_frame_1 - 0.086 11.9 0.2 0.091 11.8 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) DUF3666 PF12408.8 NODE_79349_length_199_cov_1.756098_g71408_i0forward_frame_1 - 0.011 14.9 0.0 0.017 14.4 0.0 1.2 1 0 0 1 1 1 0 Ribose-5-phosphate isomerase GBP_PSP PF02425.15 NODE_79347_length_199_cov_1.768293_g71406_i0forward_frame_1 - 0.0057 16.3 1.5 0.013 15.2 1.5 1.5 1 0 0 1 1 1 1 Paralytic/GBP/PSP peptide PNKP-ligase_C PF16536.5 NODE_79341_length_199_cov_1.817073_g71400_i0reverse_frame_1 - 0.067 13.4 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 PNKP adenylyltransferase domain, C-terminal region ptaRNA1_toxin PF12703.7 NODE_79337_length_199_cov_1.823171_g71396_i0reverse_frame_1 - 0.2 11.7 0.0 0.26 11.4 0.0 1.1 1 0 0 1 1 1 0 Toxin of toxin-antitoxin type 1 system FHA_2 PF17913.1 NODE_79334_length_199_cov_1.859756_g71393_i0forward_frame_1 - 0.087 13.1 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 FHA domain ARL6IP6 PF15062.6 NODE_79330_length_199_cov_1.878049_g71389_i0reverse_frame_1 - 0.066 13.4 0.2 0.071 13.2 0.2 1.1 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix DUF5315 PF17242.2 NODE_79329_length_199_cov_1.890244_g71388_i0forward_frame_1 - 0.077 12.8 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Disordered region of unknown function (DUF5315) MRP-S28 PF10213.9 NODE_79326_length_199_cov_1.896341_g71385_i0forward_frame_1 - 0.042 14.3 0.0 0.049 14.1 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit protein ABC2_membrane PF01061.24 NODE_79305_length_199_cov_2.042683_g71364_i0reverse_frame_1 - 0.014 14.8 0.4 0.014 14.8 0.4 1.1 1 0 0 1 1 1 0 ABC-2 type transporter zf-MIZ PF02891.20 NODE_79305_length_199_cov_2.042683_g71364_i0forward_frame_1 - 4.9 7.0 7.6 6.2 6.7 1.5 2.4 1 1 2 3 3 3 0 MIZ/SP-RING zinc finger BclA_C PF18573.1 NODE_79298_length_199_cov_2.146341_g71357_i0forward_frame_1 - 0.041 13.8 0.0 0.041 13.8 0.0 1.1 1 0 0 1 1 1 0 BclA C-terminal domain CSN4_RPN5_eIF3a PF18420.1 NODE_79298_length_199_cov_2.146341_g71357_i0forward_frame_1 - 0.12 12.6 0.2 0.19 11.9 0.2 1.4 1 0 0 1 1 1 0 CSN4/RPN5/eIF3a helix turn helix domain STE3 PF02076.15 NODE_79287_length_199_cov_2.237805_g71346_i0reverse_frame_1 - 0.059 12.6 0.1 0.067 12.4 0.1 1.1 1 0 0 1 1 1 0 Pheromone A receptor AIM3 PF17096.5 NODE_79284_length_199_cov_2.262195_g71343_i0forward_frame_1 - 0.015 16.2 2.1 0.018 16.0 2.1 1.1 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 Peptidase_G2 PF11962.8 NODE_79284_length_199_cov_2.262195_g71343_i0forward_frame_1 - 0.07 12.5 1.0 0.076 12.4 1.0 1.1 1 0 0 1 1 1 0 Peptidase_G2, IMC autoproteolytic cleavage domain Rhabdo_M2 PF04785.12 NODE_79284_length_199_cov_2.262195_g71343_i0forward_frame_1 - 0.11 11.8 0.2 0.11 11.7 0.2 1.2 1 0 0 1 1 1 0 Rhabdovirus matrix protein M2 Ribosomal_L34 PF00468.17 NODE_79270_length_199_cov_2.518293_g71329_i0forward_frame_1 - 0.082 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L34 UL11 PF11094.8 NODE_79268_length_199_cov_2.628049_g71327_i0forward_frame_1 - 0.16 11.9 0.2 0.24 11.3 0.2 1.3 1 0 0 1 1 1 0 Membrane-associated tegument protein Mating_N PF12731.7 NODE_79267_length_199_cov_2.658537_g71326_i0forward_frame_1 - 0.11 12.6 0.5 0.3 11.2 0.3 1.7 1 1 1 2 2 2 0 Mating-type protein beta 1 CGI-121 PF08617.10 NODE_79265_length_199_cov_2.682927_g71324_i0reverse_frame_1 - 0.029 14.5 0.2 0.03 14.5 0.2 1.1 1 0 0 1 1 1 0 Kinase binding protein CGI-121 DUF4006 PF13179.6 NODE_79265_length_199_cov_2.682927_g71324_i0reverse_frame_1 - 0.22 11.5 1.8 0.22 11.4 0.3 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF4006) XPG_I PF00867.18 NODE_79261_length_199_cov_2.768293_g71320_i0reverse_frame_1 - 7.4e-17 61.5 0.0 8.2e-17 61.3 0.0 1.1 1 0 0 1 1 1 1 XPG I-region XPG_I_2 PF12813.7 NODE_79261_length_199_cov_2.768293_g71320_i0reverse_frame_1 - 8.4e-06 25.4 0.0 9.2e-06 25.3 0.0 1.0 1 0 0 1 1 1 1 XPG domain containing FWWh PF14922.6 NODE_79255_length_199_cov_2.835366_g71314_i0forward_frame_1 - 0.0033 17.4 0.1 0.0033 17.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF4251 PF14059.6 NODE_79253_length_199_cov_2.987805_g71312_i0reverse_frame_1 - 0.052 13.5 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4251) DUF1600 PF07667.11 NODE_79245_length_199_cov_3.256098_g71304_i0reverse_frame_1 - 0.039 14.2 6.4 0.045 14.0 6.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) DUF3599 PF12206.8 NODE_79245_length_199_cov_3.256098_g71304_i0forward_frame_1 - 0.016 15.6 0.1 0.018 15.4 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3599) DUF1471 PF07338.13 NODE_79241_length_199_cov_3.310976_g71300_i0reverse_frame_1 - 5.6e-17 61.5 1.7 6.5e-17 61.3 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF2675 PF11247.8 NODE_79234_length_199_cov_3.646341_g71293_i0reverse_frame_1 - 0.054 13.6 0.2 0.066 13.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2675) SHIPPO-rpt PF07004.12 NODE_79232_length_199_cov_5.103659_g71291_i0reverse_frame_1 - 0.075 14.0 9.9 0.36 11.8 0.7 3.1 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat Myc_target_1 PF15179.6 NODE_79215_length_199_cov_27.487805_g71274_i0reverse_frame_1 - 0.074 12.9 0.3 0.081 12.8 0.3 1.0 1 0 0 1 1 1 0 Myc target protein 1 SEF14_adhesin PF06443.11 NODE_79211_length_199_cov_29.140244_g71270_i0reverse_frame_1 - 0.08 12.8 0.0 0.089 12.7 0.0 1.0 1 0 0 1 1 1 0 SEF14-like adhesin ORC6 PF05460.13 NODE_79207_length_199_cov_32.597561_g71266_i0reverse_frame_1 - 0.093 12.0 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Gp49 PF05973.14 NODE_79198_length_199_cov_36.036585_g71257_i0reverse_frame_1 - 0.062 13.4 0.5 0.43 10.8 0.0 1.9 1 1 1 2 2 2 0 Phage derived protein Gp49-like (DUF891) Phage_min_tail PF05939.13 NODE_79192_length_199_cov_40.823171_g71251_i0forward_frame_1 - 0.03 14.7 0.0 0.034 14.5 0.0 1.1 1 0 0 1 1 1 0 Phage minor tail protein Histone_H2A_C PF16211.5 NODE_79192_length_199_cov_40.823171_g71251_i0forward_frame_1 - 1.6 8.5 5.4 2.5 7.9 5.4 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Integrin_alpha PF00357.20 NODE_79189_length_199_cov_42.896341_g71248_i0reverse_frame_1 - 0.089 12.8 1.4 0.2 11.7 1.4 1.6 1 0 0 1 1 1 0 Integrin alpha cytoplasmic region Pkinase PF00069.25 NODE_79187_length_199_cov_43.219512_g71246_i0forward_frame_1 - 0.016 14.6 0.1 0.016 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain GRAS PF03514.14 NODE_79173_length_199_cov_57.902439_g71232_i0forward_frame_1 - 0.13 11.2 0.0 0.14 11.1 0.0 1.0 1 0 0 1 1 1 0 GRAS domain family DUF2178 PF09946.9 NODE_79170_length_199_cov_69.689024_g71229_i0reverse_frame_1 - 0.063 13.5 0.6 0.083 13.1 0.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2178) SR-25 PF10500.9 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_1 - 0.13 11.8 7.1 0.14 11.7 7.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Tube PF17212.3 NODE_79159_length_199_cov_113.621951_g71218_i0forward_frame_1 - 0.17 11.9 0.0 0.17 11.9 0.0 1.0 1 0 0 1 1 1 0 Tail tubular protein RPA_interact_N PF14766.6 NODE_79148_length_199_cov_4475.951220_g71207_i0forward_frame_1 - 0.0074 15.9 7.7 0.047 13.3 0.6 2.2 2 0 0 2 2 2 2 Replication protein A interacting N-terminal MetOD1 PF18546.1 NODE_79147_length_199_cov_4490.750000_g71206_i0forward_frame_1 - 0.16 12.0 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Metanogen output domain 1 Dynactin_p62 PF05502.13 NODE_79146_length_199_cov_8057.378049_g71205_i0reverse_frame_1 - 0.064 12.0 0.5 0.067 12.0 0.5 1.0 1 0 0 1 1 1 0 Dynactin p62 family IF3_C PF00707.22 NODE_79137_length_200_cov_0.896970_g71196_i0forward_frame_1 - 0.1 12.5 0.3 0.13 12.2 0.3 1.2 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain Inhibitor_I53 PF11714.8 NODE_79135_length_200_cov_0.951515_g71194_i0reverse_frame_1 - 0.055 13.7 0.1 0.062 13.5 0.1 1.1 1 0 0 1 1 1 0 Thrombin inhibitor Madanin Conotoxin PF02950.17 NODE_79125_length_200_cov_0.963636_g71184_i0reverse_frame_1 - 0.2 12.7 0.6 0.24 12.4 0.1 1.4 2 0 0 2 2 2 0 Conotoxin DUF5383 PF17355.2 NODE_79125_length_200_cov_0.963636_g71184_i0forward_frame_1 - 0.022 15.1 2.6 0.037 14.4 2.6 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5383) DUF4441 PF14536.6 NODE_79120_length_200_cov_0.963636_g71179_i0forward_frame_1 - 0.027 14.6 1.0 0.037 14.2 1.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) ABC_trans_CmpB PF06541.11 NODE_79120_length_200_cov_0.963636_g71179_i0forward_frame_1 - 0.12 12.6 0.2 0.12 12.6 0.2 1.1 1 0 0 1 1 1 0 Putative ABC-transporter type IV SR-25 PF10500.9 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.00035 20.2 6.4 0.00042 20.0 6.4 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein RAB3GAP2_N PF14655.6 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.073 12.3 6.2 0.077 12.2 6.2 1.0 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit N-terminus RPA43_OB PF17875.1 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.078 13.6 4.2 0.082 13.5 4.2 1.1 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I IMUP PF15761.5 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.079 13.7 3.4 0.1 13.3 3.4 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein Dynamin_N PF00350.23 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.19 11.8 2.1 0.2 11.7 2.1 1.0 1 0 0 1 1 1 0 Dynamin family DUF4834 PF16118.5 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.2 12.6 3.5 0.22 12.5 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Serinc PF03348.15 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.26 10.2 1.8 0.27 10.1 1.8 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) Connexin PF00029.19 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.33 10.7 2.5 0.35 10.6 2.5 1.0 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 3.1 6.5 6.0 3.5 6.3 6.0 1.1 1 0 0 1 1 1 0 Presenilin L_lactis_RepB_C PF06430.12 NODE_79115_length_200_cov_0.963636_g71174_i0forward_frame_1 - 0.049 13.6 0.2 0.053 13.5 0.2 1.1 1 0 0 1 1 1 0 Lactococcus lactis RepB C-terminus DUF4291 PF14124.6 NODE_79114_length_200_cov_0.969697_g71173_i0forward_frame_1 - 0.09 12.6 0.1 0.1 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4291) RGS12_usC PF16612.5 NODE_79109_length_200_cov_0.969697_g71168_i0reverse_frame_1 - 0.0087 16.5 0.0 0.0093 16.4 0.0 1.1 1 0 0 1 1 1 1 C-terminal unstructured region of RGS12 DUF4096 PF13340.6 NODE_79095_length_200_cov_0.969697_g71154_i0forward_frame_1 - 0.035 14.3 0.3 0.053 13.7 0.3 1.3 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) HNH_3 PF13392.6 NODE_79092_length_200_cov_0.969697_g71151_i0forward_frame_1 - 4e-06 26.5 0.1 5.9e-06 25.9 0.1 1.2 1 0 0 1 1 1 1 HNH endonuclease TetR_C_14 PF17754.1 NODE_79063_length_200_cov_1.127273_g71122_i0forward_frame_1 - 0.0095 15.9 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 MftR C-terminal domain tRNA_synt_2f PF02092.17 NODE_79050_length_200_cov_1.200000_g71109_i0reverse_frame_1 - 0.027 13.4 0.1 0.031 13.2 0.1 1.0 1 0 0 1 1 1 0 Glycyl-tRNA synthetase beta subunit ACT_7 PF13840.6 NODE_79049_length_200_cov_1.206061_g71108_i0forward_frame_1 - 0.11 12.3 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 ACT domain Neurensin PF14927.6 NODE_79029_length_200_cov_1.272727_g71088_i0forward_frame_1 - 0.13 12.0 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Neurensin DIM1 PF02966.16 NODE_79027_length_200_cov_1.272727_g71086_i0reverse_frame_1 - 0.088 12.6 0.4 0.092 12.5 0.4 1.1 1 0 0 1 1 1 0 Mitosis protein DIM1 AMP-binding PF00501.28 NODE_79023_length_200_cov_1.290909_g71082_i0forward_frame_1 - 0.00011 21.0 0.0 0.00011 21.0 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme Swi3 PF07962.12 NODE_79014_length_200_cov_1.339394_g71073_i0reverse_frame_1 - 0.066 13.2 0.6 0.078 13.0 0.6 1.1 1 0 0 1 1 1 0 Replication Fork Protection Component Swi3 ATP-synt_8 PF00895.20 NODE_79002_length_200_cov_1.393939_g71061_i0reverse_frame_1 - 0.7 10.4 5.3 0.22 12.0 2.9 1.5 2 0 0 2 2 2 0 ATP synthase protein 8 TPR_2 PF07719.17 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 4.3e-05 23.3 0.2 0.00014 21.7 0.2 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.00021 21.2 0.4 0.00049 20.1 0.1 1.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.00099 19.3 0.1 0.0013 19.0 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.0015 18.3 0.3 0.0079 16.0 0.2 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.0094 15.9 0.3 0.022 14.7 0.2 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.012 15.2 2.6 0.028 14.1 2.8 1.6 1 1 0 1 1 1 0 TPR repeat TPR_MalT PF17874.1 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.029 13.7 0.0 0.029 13.7 0.0 1.0 1 0 0 1 1 1 0 MalT-like TPR region RHD_DNA_bind PF00554.22 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.057 13.4 0.0 0.063 13.2 0.0 1.0 1 0 0 1 1 1 0 Rel homology DNA-binding domain TPR_10 PF13374.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.083 12.8 0.6 0.18 11.8 0.6 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.099 13.5 0.0 0.12 13.2 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF3629 PF12302.8 NODE_78978_length_200_cov_1.454545_g71037_i0reverse_frame_1 - 0.0097 15.4 0.1 0.0097 15.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3629) DUF5554 PF17709.1 NODE_78975_length_200_cov_1.454545_g71034_i0reverse_frame_1 - 0.00045 20.3 0.0 0.0027 17.8 0.0 1.9 1 1 1 2 2 2 1 Family of unknown function (DUF5554) YqgC PF17430.2 NODE_78969_length_200_cov_1.454545_g71028_i0reverse_frame_1 - 0.1 12.7 0.9 0.17 12.0 0.1 1.8 1 1 1 2 2 2 0 Uncharacterized YqgC-like DUF4867 PF16161.5 NODE_78961_length_200_cov_1.515152_g71020_i0reverse_frame_1 - 0.09 12.2 0.1 0.099 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4867) DUF5065 PF16723.5 NODE_78944_length_200_cov_1.606061_g71003_i0forward_frame_1 - 0.061 13.4 0.1 0.066 13.3 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5065) zf-CCHC PF00098.23 NODE_78943_length_200_cov_1.612121_g71002_i0forward_frame_1 - 0.00012 22.0 0.7 0.00019 21.4 0.7 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_3 PF13917.6 NODE_78943_length_200_cov_1.612121_g71002_i0forward_frame_1 - 0.00033 20.5 0.1 0.00045 20.1 0.1 1.2 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_4 PF14392.6 NODE_78943_length_200_cov_1.612121_g71002_i0forward_frame_1 - 0.087 12.6 0.8 0.12 12.1 0.8 1.2 1 0 0 1 1 1 0 Zinc knuckle TraQ PF09679.10 NODE_78939_length_200_cov_1.630303_g70998_i0reverse_frame_1 - 0.043 13.7 0.4 0.054 13.4 0.4 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin chaperone (TraQ) CCER1 PF15482.6 NODE_78935_length_200_cov_1.648485_g70994_i0reverse_frame_1 - 0.038 13.9 1.3 0.042 13.7 1.3 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 CIAPIN1 PF05093.13 NODE_78932_length_200_cov_1.660606_g70991_i0reverse_frame_1 - 0.058 13.9 0.0 0.058 13.9 0.0 1.1 1 0 0 1 1 1 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis Thioredoxin PF00085.20 NODE_78911_length_200_cov_1.763636_g70970_i0forward_frame_1 - 0.035 14.1 0.0 0.036 14.1 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin CpeT PF06206.11 NODE_78909_length_200_cov_1.787879_g70968_i0forward_frame_1 - 0.024 14.6 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 CpeT/CpcT family (DUF1001) CNOT11 PF10155.9 NODE_78907_length_200_cov_1.806061_g70966_i0reverse_frame_1 - 0.054 13.7 0.3 0.065 13.4 0.3 1.4 1 1 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 TAT_signal PF10518.9 NODE_78903_length_200_cov_1.848485_g70962_i0reverse_frame_1 - 0.0016 18.2 0.3 0.0022 17.7 0.3 1.2 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence TRP PF06011.12 NODE_78902_length_200_cov_1.872727_g70961_i0reverse_frame_1 - 0.0067 15.2 1.8 0.0068 15.2 1.8 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel GIT1_C PF12205.8 NODE_78896_length_200_cov_1.909091_g70955_i0forward_frame_1 - 0.062 13.4 0.1 0.073 13.2 0.1 1.0 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term ubiquitin PF00240.23 NODE_78884_length_200_cov_1.933333_g70943_i0reverse_frame_1 - 0.09 12.5 0.0 0.097 12.4 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin family Tet_JBP PF12851.7 NODE_78877_length_200_cov_1.957576_g70936_i0forward_frame_1 - 0.13 11.6 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Oxygenase domain of the 2OGFeDO superfamily YvfG PF09628.10 NODE_78867_length_200_cov_2.060606_g70926_i0reverse_frame_1 - 0.14 12.5 1.8 0.16 12.3 0.4 1.7 2 0 0 2 2 2 0 YvfG protein DUF2682 PF10909.8 NODE_78854_length_200_cov_2.181818_g70913_i0reverse_frame_1 - 0.025 15.1 0.0 0.029 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2682) rve PF00665.26 NODE_78846_length_200_cov_2.351515_g70905_i0forward_frame_1 - 1.9e-08 34.5 0.0 2e-08 34.4 0.0 1.0 1 0 0 1 1 1 1 Integrase core domain DUF4224 PF13986.6 NODE_78846_length_200_cov_2.351515_g70905_i0forward_frame_1 - 0.13 12.2 0.0 0.72 9.8 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) EamA PF00892.20 NODE_78845_length_200_cov_2.363636_g70904_i0reverse_frame_1 - 0.0011 19.1 1.9 0.0013 18.9 1.9 1.0 1 0 0 1 1 1 1 EamA-like transporter family BT1 PF03092.16 NODE_78845_length_200_cov_2.363636_g70904_i0reverse_frame_1 - 0.0041 15.4 1.1 0.0044 15.3 1.1 1.0 1 0 0 1 1 1 1 BT1 family PilI PF10623.9 NODE_78838_length_200_cov_2.436364_g70897_i0reverse_frame_1 - 0.0094 16.1 0.3 0.011 15.9 0.2 1.3 1 1 0 1 1 1 1 Plasmid conjugative transfer protein PilI C5HCH PF17982.1 NODE_78838_length_200_cov_2.436364_g70897_i0reverse_frame_1 - 9.2 6.5 11.7 2.3 8.4 8.2 1.9 2 1 0 2 2 2 0 NSD Cys-His rich domain AIM5 PF17050.5 NODE_78836_length_200_cov_2.515152_g70895_i0reverse_frame_1 - 0.047 14.5 0.5 0.053 14.3 0.5 1.4 1 1 0 1 1 1 0 Altered inheritance of mitochondria 5 SH3_11 PF18103.1 NODE_78836_length_200_cov_2.515152_g70895_i0reverse_frame_1 - 0.05 13.8 0.0 0.069 13.3 0.0 1.2 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain DUF959 PF06121.14 NODE_78831_length_200_cov_2.672727_g70890_i0forward_frame_1 - 0.12 12.7 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF959) Cytomega_UL84 PF06284.11 NODE_78828_length_200_cov_2.993939_g70887_i0forward_frame_1 - 0.18 10.2 0.1 0.19 10.2 0.1 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein PNP_phzG_C PF10590.9 NODE_78825_length_200_cov_3.181818_g70884_i0reverse_frame_1 - 0.027 14.6 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IF3_C PF00707.22 NODE_78821_length_200_cov_3.375758_g70880_i0reverse_frame_1 - 0.039 13.9 0.1 0.046 13.7 0.1 1.1 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain MASE4 PF17158.4 NODE_78819_length_200_cov_3.727273_g70878_i0reverse_frame_1 - 1.1e-14 54.4 3.9 1.1e-14 54.3 3.9 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain RHS PF03527.14 NODE_78819_length_200_cov_3.727273_g70878_i0reverse_frame_1 - 0.00026 20.7 0.1 0.00047 19.8 0.1 1.4 1 0 0 1 1 1 1 RHS protein Sirohm_synth_M PF14824.6 NODE_78813_length_200_cov_21.151515_g70872_i0reverse_frame_1 - 0.12 11.8 0.3 0.37 10.3 0.3 1.9 1 0 0 1 1 1 0 Sirohaem biosynthesis protein central FemAB PF02388.16 NODE_78801_length_200_cov_32.993939_g70860_i0forward_frame_1 - 0.033 13.1 0.9 0.035 13.0 0.9 1.0 1 0 0 1 1 1 0 FemAB family Tmemb_161AB PF10268.9 NODE_78783_length_200_cov_52.036364_g70842_i0forward_frame_1 - 0.17 10.5 0.1 0.17 10.5 0.1 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB TMEM108 PF15759.5 NODE_78781_length_200_cov_55.739394_g70840_i0forward_frame_1 - 0.76 8.7 7.2 0.86 8.5 7.2 1.0 1 0 0 1 1 1 0 TMEM108 family BRE1 PF08647.11 NODE_78778_length_200_cov_61.200000_g70837_i0reverse_frame_1 - 0.0075 16.3 0.1 0.0095 16.0 0.1 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase LapA_dom PF06305.11 NODE_78776_length_200_cov_62.666667_g70835_i0forward_frame_1 - 0.041 13.7 2.1 0.063 13.1 2.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain BssB_TutG PF18512.1 NODE_78756_length_200_cov_110.309091_g70815_i0reverse_frame_1 - 0.039 13.8 3.3 0.048 13.5 3.3 1.2 1 0 0 1 1 1 0 Benzylsuccinate synthase beta subunit Sex_peptide PF08138.11 NODE_78747_length_200_cov_147.296970_g70806_i0forward_frame_1 - 0.017 15.2 0.1 0.029 14.5 0.1 1.4 1 0 0 1 1 1 0 Sex peptide (SP) family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks367.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks367.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks367.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks367.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MAGUK_N_PEST PF10608.9 NODE_78744_length_200_cov_218.127273_g70803_i0forward_frame_1 - 0.11 12.9 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Polyubiquitination (PEST) N-terminal domain of MAGUK T3SS_needle_reg PF09025.10 NODE_78741_length_200_cov_269.539394_g70800_i0forward_frame_1 - 0.056 13.4 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 YopR, type III needle-polymerisation regulator DUF505 PF04458.12 NODE_78741_length_200_cov_269.539394_g70800_i0forward_frame_1 - 0.082 11.3 0.0 0.09 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Destabilase PF05497.12 NODE_78736_length_201_cov_0.849398_g70795_i0forward_frame_1 - 0.054 13.8 1.5 0.055 13.8 1.3 1.2 1 1 0 1 1 1 0 Destabilase DUF3043 PF11241.8 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_1 - 0.4 10.7 4.4 0.46 10.5 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Atrophin-1 PF03154.15 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_1 - 0.81 7.9 17.2 0.79 7.9 17.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family Cytomega_UL84 PF06284.11 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_1 - 1 7.7 3.8 1 7.8 3.8 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Apis_Csd PF11671.8 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_1 - 3.3 7.7 8.2 3.5 7.6 8.2 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein PAX PF00292.18 NODE_78731_length_201_cov_0.903614_g70790_i0reverse_frame_1 - 0.11 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 'Paired box' domain Cortexin PF11057.8 NODE_78729_length_201_cov_0.933735_g70788_i0reverse_frame_1 - 0.86 9.5 6.3 1.2 9.0 6.3 1.2 1 0 0 1 1 1 0 Cortexin of kidney Prolactin_RP PF15172.6 NODE_78715_length_201_cov_0.963855_g70774_i0reverse_frame_1 - 0.0026 17.4 0.8 0.0037 16.8 0.8 1.3 1 0 0 1 1 1 1 Prolactin-releasing peptide DUF3425 PF11905.8 NODE_78710_length_201_cov_0.963855_g70769_i0forward_frame_1 - 0.031 14.3 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) SfLAP PF11139.8 NODE_78706_length_201_cov_0.963855_g70765_i0reverse_frame_1 - 0.07 12.6 0.5 0.086 12.3 0.5 1.0 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein zf-LITAF-like PF10601.9 NODE_78706_length_201_cov_0.963855_g70765_i0reverse_frame_1 - 0.1 12.9 0.4 0.12 12.6 0.4 1.1 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain DUF3043 PF11241.8 NODE_78704_length_201_cov_0.963855_g70763_i0forward_frame_1 - 1.5 8.8 4.3 1.6 8.7 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) RPA_interact_N PF14766.6 NODE_78696_length_201_cov_0.963855_g70755_i0reverse_frame_1 - 0.0056 16.3 0.1 0.011 15.3 0.1 1.5 1 0 0 1 1 1 1 Replication protein A interacting N-terminal Pox_RNA_Pol_22 PF05273.13 NODE_78690_length_201_cov_0.963855_g70749_i0forward_frame_1 - 0.16 11.7 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Poxvirus RNA polymerase 22 kDa subunit TRI5 PF06330.11 NODE_78687_length_201_cov_0.963855_g70746_i0reverse_frame_1 - 0.26 10.1 0.5 0.27 10.0 0.5 1.0 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) DUF4215 PF13948.6 NODE_78684_length_201_cov_0.963855_g70743_i0forward_frame_1 - 0.00078 19.8 18.3 0.0042 17.5 6.8 3.0 1 1 2 3 3 3 3 Domain of unknown function (DUF4215) Prok-E2_C PF14459.6 NODE_78678_length_201_cov_0.963855_g70737_i0forward_frame_1 - 0.066 13.4 0.2 0.07 13.3 0.2 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family C VP7 PF00434.18 NODE_78673_length_201_cov_1.006024_g70732_i0forward_frame_1 - 0.051 12.7 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 Glycoprotein VP7 Col_cuticle_N PF01484.17 NODE_78668_length_201_cov_1.036145_g70727_i0reverse_frame_1 - 0.021 14.9 2.5 0.042 13.9 2.5 1.5 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain DUF1509 PF07420.11 NODE_78666_length_201_cov_1.060241_g70725_i0forward_frame_1 - 0.021 13.8 2.1 0.022 13.7 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) DUF5480 PF17576.2 NODE_78664_length_201_cov_1.072289_g70723_i0forward_frame_1 - 0.027 14.4 0.0 0.032 14.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5480) PGM_PMM_II PF02879.16 NODE_78659_length_201_cov_1.126506_g70718_i0reverse_frame_1 - 4e-08 33.8 0.0 4.3e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Usg PF06233.12 NODE_78655_length_201_cov_1.144578_g70714_i0forward_frame_1 - 0.073 13.2 0.0 0.42 10.8 0.0 1.8 1 1 1 2 2 2 0 Usg-like family Kringle PF00051.18 NODE_78649_length_201_cov_1.162651_g70708_i0forward_frame_1 - 0.058 13.7 0.0 0.075 13.4 0.0 1.3 1 0 0 1 1 1 0 Kringle domain DUF2249 PF10006.9 NODE_78645_length_201_cov_1.186747_g70704_i0reverse_frame_1 - 0.021 14.7 0.0 0.49 10.3 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) DUF3038 PF11237.8 NODE_78640_length_201_cov_1.204819_g70699_i0forward_frame_1 - 0.021 14.9 0.2 0.023 14.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) ACTL7A_N PF16840.5 NODE_78639_length_201_cov_1.204819_g70698_i0reverse_frame_1 - 0.055 13.5 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 Actin-like protein 7A N-terminus Vps51 PF08700.11 NODE_78638_length_201_cov_1.204819_g70697_i0forward_frame_1 - 0.035 14.2 0.2 0.046 13.8 0.2 1.3 1 1 0 1 1 1 0 Vps51/Vps67 BLOC1_2 PF10046.9 NODE_78638_length_201_cov_1.204819_g70697_i0forward_frame_1 - 0.037 14.3 1.9 0.058 13.7 1.9 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF5638 PF18688.1 NODE_78638_length_201_cov_1.204819_g70697_i0forward_frame_1 - 0.042 14.2 0.0 0.051 13.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5638) ApoC-I PF04691.12 NODE_78638_length_201_cov_1.204819_g70697_i0forward_frame_1 - 0.067 13.1 0.2 0.095 12.6 0.2 1.2 1 0 0 1 1 1 0 Apolipoprotein C-I (ApoC-1) DUF2284 PF10050.9 NODE_78633_length_201_cov_1.234940_g70692_i0forward_frame_1 - 0.063 13.0 2.4 0.066 13.0 2.4 1.1 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Pkinase PF00069.25 NODE_78630_length_201_cov_1.271084_g70689_i0forward_frame_1 - 4e-06 26.4 0.0 4e-06 26.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain YfzA PF14118.6 NODE_78619_length_201_cov_1.313253_g70678_i0forward_frame_1 - 0.0078 16.6 0.0 0.0091 16.4 0.0 1.1 1 0 0 1 1 1 1 YfzA-like protein DUF5409 PF17421.2 NODE_78612_length_201_cov_1.391566_g70671_i0reverse_frame_1 - 0.48 11.2 6.2 0.58 10.9 6.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) DUF3850 PF12961.7 NODE_78612_length_201_cov_1.391566_g70671_i0forward_frame_1 - 0.093 12.8 1.3 2.5 8.2 1.3 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF3850) Peptidase_C25 PF01364.18 NODE_78605_length_201_cov_1.415663_g70664_i0forward_frame_1 - 0.0057 15.9 0.0 0.0057 15.9 0.0 1.0 1 0 0 1 1 1 1 Peptidase family C25 Raptor_N PF14538.6 NODE_78605_length_201_cov_1.415663_g70664_i0forward_frame_1 - 0.025 14.5 0.0 0.042 13.8 0.0 1.6 1 1 0 1 1 1 0 Raptor N-terminal CASPase like domain UL41A PF17591.2 NODE_78604_length_201_cov_1.427711_g70663_i0reverse_frame_1 - 0.065 13.4 0.2 0.069 13.2 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL41A RVT_2 PF07727.14 NODE_78588_length_201_cov_1.445783_g70647_i0forward_frame_1 - 8.9e-05 22.2 0.0 0.0001 22.1 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) MtlR PF05068.12 NODE_78584_length_201_cov_1.445783_g70643_i0forward_frame_1 - 0.17 11.9 0.4 0.2 11.6 0.4 1.1 1 0 0 1 1 1 0 Mannitol repressor IF-2 PF11987.8 NODE_78583_length_201_cov_1.445783_g70642_i0forward_frame_1 - 0.043 13.9 0.2 0.044 13.9 0.2 1.1 1 0 0 1 1 1 0 Translation-initiation factor 2 Bro-N PF02498.17 NODE_78579_length_201_cov_1.445783_g70638_i0reverse_frame_1 - 0.075 13.7 0.0 0.081 13.6 0.0 1.1 1 0 0 1 1 1 0 BRO family, N-terminal domain DUF148 PF02520.17 NODE_78577_length_201_cov_1.445783_g70636_i0reverse_frame_1 - 0.0021 18.1 0.7 0.0022 18.1 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF148 Sec62 PF03839.16 NODE_78577_length_201_cov_1.445783_g70636_i0forward_frame_1 - 5.6 6.4 6.5 5.8 6.4 6.5 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 PPP4R2 PF09184.11 NODE_78571_length_201_cov_1.493976_g70630_i0reverse_frame_1 - 0.27 10.8 0.2 0.27 10.8 0.2 1.1 1 0 0 1 1 1 0 PPP4R2 Neil1-DNA_bind PF09292.10 NODE_78565_length_201_cov_1.524096_g70624_i0forward_frame_1 - 0.071 13.1 0.8 2.9 7.9 0.2 2.8 2 1 1 3 3 3 0 Endonuclease VIII-like 1, DNA bind PNP_UDP_1 PF01048.20 NODE_78557_length_201_cov_1.542169_g70616_i0forward_frame_1 - 0.0015 17.8 0.0 0.0016 17.8 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily ESCRT-II PF05871.12 NODE_78556_length_201_cov_1.548193_g70615_i0forward_frame_1 - 0.0026 18.0 0.7 0.003 17.8 0.7 1.1 1 0 0 1 1 1 1 ESCRT-II complex subunit VAR1 PF05316.12 NODE_78554_length_201_cov_1.578313_g70613_i0reverse_frame_1 - 0.0093 15.0 2.3 0.01 14.9 2.3 1.0 1 0 0 1 1 1 1 Mitochondrial ribosomal protein (VAR1) Cys_rich_KTR PF14205.6 NODE_78549_length_201_cov_1.590361_g70608_i0forward_frame_1 - 0.097 12.5 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR YppG PF14179.6 NODE_78541_length_201_cov_1.650602_g70600_i0reverse_frame_1 - 0.12 13.0 2.1 0.13 13.0 2.1 1.0 1 0 0 1 1 1 0 YppG-like protein Fungal_KA1 PF16797.5 NODE_78540_length_201_cov_1.650602_g70599_i0reverse_frame_1 - 0.053 13.2 0.0 0.077 12.7 0.0 1.2 1 0 0 1 1 1 0 Fungal kinase associated-1 domain PFK PF00365.20 NODE_78539_length_201_cov_1.650602_g70598_i0forward_frame_1 - 1.7e-07 30.9 0.0 1.7e-07 30.8 0.0 1.0 1 0 0 1 1 1 1 Phosphofructokinase COX2 PF00116.20 NODE_78532_length_201_cov_1.680723_g70591_i0forward_frame_1 - 0.12 12.2 0.1 0.13 12.1 0.1 1.0 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain Herpes_US9 PF06072.11 NODE_78531_length_201_cov_1.680723_g70590_i0forward_frame_1 - 0.2 11.6 0.2 0.37 10.7 0.1 1.5 1 1 1 2 2 2 0 Alphaherpesvirus tegument protein US9 Lustrin_cystein PF14625.6 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 0.045 14.1 22.3 0.29 11.5 4.9 3.2 1 1 1 2 2 2 0 Lustrin, cysteine-rich repeated domain Opy2 PF09463.10 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 0.048 14.0 19.2 1.5 9.2 1.1 3.3 2 1 1 3 3 3 0 Opy2 protein Dickkopf_N PF04706.12 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 0.36 11.4 10.0 2.4e+02 2.3 9.9 3.2 1 1 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region TNFR_c6 PF00020.18 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 1.2 9.6 16.7 0.15 12.5 2.3 3.0 2 1 0 2 2 2 0 TNFR/NGFR cysteine-rich region Ephrin_rec_like PF07699.13 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 7.9 6.3 23.2 1.3 8.8 3.0 3.7 1 1 2 3 3 3 0 Putative ephrin-receptor like B_solenoid_ydck PF18836.1 NODE_78515_length_201_cov_1.861446_g70574_i0forward_frame_1 - 0.093 12.6 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Beta solenoid repeat from YDCK JSRP PF15312.6 NODE_78514_length_201_cov_1.867470_g70573_i0forward_frame_1 - 1.9 8.5 3.6 2.8 7.9 1.6 1.9 1 1 1 2 2 2 0 Junctional sarcoplasmic reticulum protein FlgT_N PF16548.5 NODE_78512_length_201_cov_1.879518_g70571_i0reverse_frame_1 - 0.14 12.8 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 Flagellar assembly protein T, N-terminal domain DUF3273 PF11677.8 NODE_78512_length_201_cov_1.879518_g70571_i0forward_frame_1 - 0.053 12.8 0.0 0.053 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3273) PTPS_related PF10131.9 NODE_78510_length_201_cov_1.885542_g70569_i0reverse_frame_1 - 0.11 10.8 2.2 0.12 10.7 2.2 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein FGF PF00167.18 NODE_78508_length_201_cov_1.903614_g70567_i0reverse_frame_1 - 0.018 15.2 0.2 0.019 15.1 0.2 1.1 1 0 0 1 1 1 0 Fibroblast growth factor PolyA_pol PF01743.20 NODE_78506_length_201_cov_1.909639_g70565_i0reverse_frame_1 - 0.023 15.1 1.1 0.025 15.0 1.1 1.0 1 0 0 1 1 1 0 Poly A polymerase head domain Pacifastin_I PF05375.13 NODE_78499_length_201_cov_1.975904_g70558_i0forward_frame_1 - 0.07 12.9 0.2 0.13 12.0 0.2 1.4 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) NYD-SP28 PF14772.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0011 19.0 13.0 0.14 12.2 6.9 2.2 1 1 1 2 2 2 2 Sperm tail Spc7 PF08317.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0042 16.0 7.8 0.0045 15.9 7.8 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF641 PF04859.12 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0072 16.6 5.9 0.0092 16.3 5.9 1.2 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) Spc29 PF17082.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0097 15.8 3.3 0.01 15.7 3.3 1.1 1 0 0 1 1 1 1 Spindle Pole Component 29 Atg14 PF10186.9 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0097 15.0 5.7 0.01 15.0 5.7 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 HIP1_clath_bdg PF16515.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.012 16.2 5.0 0.016 15.8 5.0 1.3 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Fez1 PF06818.15 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.019 15.4 4.3 0.022 15.2 4.3 1.1 1 0 0 1 1 1 0 Fez1 CENP-F_leu_zip PF10473.9 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.022 14.8 10.3 0.027 14.5 10.3 1.0 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TMF_DNA_bd PF12329.8 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.026 14.5 13.6 0.58 10.2 5.8 2.3 1 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF5339 PF17274.2 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.032 15.1 1.5 0.2 12.6 0.4 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5339) Pox_A_type_inc PF04508.12 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.032 14.1 14.0 1.1 9.3 0.1 3.9 3 1 1 4 4 4 0 Viral A-type inclusion protein repeat DUF1151 PF06625.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.037 14.0 6.0 0.046 13.7 6.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1151) Med9 PF07544.13 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.044 13.9 10.1 0.055 13.6 4.0 2.2 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 XLF PF09302.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.046 13.9 8.9 1.1 9.4 3.1 2.0 1 1 1 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Sec2p PF06428.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.047 13.7 7.5 1.9 8.5 0.3 2.1 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p PKcGMP_CC PF16808.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.051 13.4 20.3 0.48 10.3 3.6 3.1 1 1 2 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF4200 PF13863.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.06 13.7 10.7 0.25 11.7 10.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) UPF0242 PF06785.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.073 13.2 9.0 0.77 9.8 9.1 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMPIT PF07851.13 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.082 12.1 1.6 0.088 12.0 1.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF3552 PF12072.8 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.12 11.8 10.7 0.13 11.6 10.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Spc42p PF11544.8 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.12 12.4 5.9 0.15 12.0 0.2 2.2 1 1 1 2 2 2 0 Spindle pole body component Spc42p DUF1635 PF07795.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.12 12.2 6.9 0.14 12.0 6.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) DUF4349 PF14257.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.13 11.7 4.5 0.16 11.4 4.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) YebO PF13974.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.13 12.3 4.8 0.19 11.8 4.8 1.2 1 0 0 1 1 1 0 YebO-like protein AAA_13 PF13166.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.14 10.8 4.4 0.14 10.7 4.4 1.0 1 0 0 1 1 1 0 AAA domain DUF1542 PF07564.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.23 11.6 5.3 0.35 11.0 5.3 1.4 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1542) TMF_TATA_bd PF12325.8 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.26 11.5 12.1 0.38 11.0 3.3 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding FAM76 PF16046.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.28 10.5 5.4 0.29 10.4 5.4 1.0 1 0 0 1 1 1 0 FAM76 protein Csm1_N PF18504.1 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.32 11.4 9.8 1.7 9.0 0.7 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain Fib_alpha PF08702.10 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.38 10.9 3.7 1.1 9.5 3.4 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DivIC PF04977.15 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.44 10.3 12.1 0.62 9.9 4.5 2.0 1 1 1 2 2 2 0 Septum formation initiator ABC_tran_CTD PF16326.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.58 10.4 14.0 0.94 9.8 14.0 1.3 1 1 0 1 1 1 0 ABC transporter C-terminal domain SlyX PF04102.12 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.65 10.7 9.1 0.55 10.9 3.1 2.0 1 1 1 2 2 2 0 SlyX USP8_interact PF08941.10 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.77 9.5 3.2 1 9.1 3.2 1.3 1 1 0 1 1 1 0 USP8 interacting BST2 PF16716.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 1 10.0 7.5 4.3 8.0 7.6 1.7 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 APG6_N PF17675.1 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 2.4 8.7 13.5 2.8 8.5 13.5 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Nup88 PF10168.9 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 2.4 5.9 7.2 2.4 5.9 7.2 1.0 1 0 0 1 1 1 0 Nuclear pore component Histone_HNS PF00816.21 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 4.2 8.3 6.7 6.7 7.6 6.7 1.5 1 1 0 1 1 1 0 H-NS histone family eIF-4B PF06273.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 7.7 5.5 7.0 8.3 5.3 7.0 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B zf-RING_2 PF13639.6 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.013 15.8 5.5 0.013 15.8 5.5 1.5 2 0 0 2 2 2 0 Ring finger domain Zn_ribbon_17 PF17120.5 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.024 14.2 2.5 0.024 14.2 2.5 1.6 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 1.3 8.9 8.9 0.56 10.1 6.6 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 2.8 8.0 10.0 1.8 8.6 6.8 2.2 1 1 1 2 2 2 0 zinc-RING finger domain DUF5510 PF17629.2 NODE_78483_length_201_cov_2.072289_g70542_i0forward_frame_1 - 0.04 13.8 1.6 0.044 13.7 1.6 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5510) Kelch_3 PF13415.6 NODE_78482_length_201_cov_2.084337_g70541_i0forward_frame_1 - 0.19 12.1 0.7 28 5.1 0.0 2.7 3 0 0 3 3 3 0 Galactose oxidase, central domain Arg_decarb_HB PF17810.1 NODE_78473_length_201_cov_2.192771_g70532_i0reverse_frame_1 - 0.17 12.2 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Arginine decarboxylase helical bundle domain PhoLip_ATPase_N PF16209.5 NODE_78466_length_201_cov_2.259036_g70525_i0forward_frame_1 - 0.064 13.0 0.2 0.079 12.7 0.2 1.2 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal Response_reg PF00072.24 NODE_78464_length_201_cov_2.271084_g70523_i0forward_frame_1 - 0.0063 16.7 0.0 0.0072 16.5 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain FoP_duplication PF13865.6 NODE_78462_length_201_cov_2.277108_g70521_i0reverse_frame_1 - 0.14 12.8 1.3 0.17 12.5 1.3 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 TT_ORF1 PF02956.14 NODE_78462_length_201_cov_2.277108_g70521_i0reverse_frame_1 - 3.8 6.1 11.3 3.8 6.1 11.3 1.0 1 0 0 1 1 1 0 TT viral orf 1 PIRT PF15099.6 NODE_78460_length_201_cov_2.283133_g70519_i0forward_frame_1 - 0.031 13.9 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family PIH1 PF08190.12 NODE_78455_length_201_cov_2.337349_g70514_i0reverse_frame_1 - 0.12 11.8 0.1 0.14 11.6 0.1 1.1 1 0 0 1 1 1 0 PIH1 N-terminal domain GRAM PF02893.20 NODE_78447_length_201_cov_2.560241_g70506_i0forward_frame_1 - 0.0034 17.2 0.1 0.004 17.0 0.1 1.1 1 0 0 1 1 1 1 GRAM domain MFS_1 PF07690.16 NODE_78444_length_201_cov_2.608434_g70503_i0reverse_frame_1 - 1.8e-06 27.1 2.4 1.9e-06 27.0 2.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF2960 PF11173.8 NODE_78440_length_201_cov_2.728916_g70499_i0reverse_frame_1 - 0.063 13.7 0.1 0.078 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2960) DEFB136 PF17333.2 NODE_78436_length_201_cov_2.795181_g70495_i0reverse_frame_1 - 0.068 13.1 5.5 0.1 12.6 5.4 1.5 1 1 0 1 1 1 0 Beta defensin 136 Baculo_ME53 PF06061.11 NODE_78436_length_201_cov_2.795181_g70495_i0forward_frame_1 - 0.03 13.6 0.1 0.03 13.6 0.1 1.0 1 0 0 1 1 1 0 Baculoviridae ME53 Med3 PF11593.8 NODE_78435_length_201_cov_2.795181_g70494_i0reverse_frame_1 - 0.22 10.7 0.7 0.23 10.6 0.7 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUSP PF06337.12 NODE_78434_length_201_cov_2.807229_g70493_i0reverse_frame_1 - 9.8e-10 38.9 0.3 1e-09 38.8 0.3 1.0 1 0 0 1 1 1 1 DUSP domain MFS_1 PF07690.16 NODE_78428_length_201_cov_3.084337_g70487_i0forward_frame_1 - 3e-05 23.1 6.6 3e-05 23.1 6.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Ham1p_like PF01725.16 NODE_78426_length_201_cov_3.204819_g70485_i0forward_frame_1 - 0.17 11.8 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Ham1 family Sugar_tr PF00083.24 NODE_78424_length_201_cov_3.373494_g70483_i0forward_frame_1 - 0.0065 15.4 0.4 0.0066 15.4 0.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Fn_bind PF02986.14 NODE_78420_length_201_cov_3.704819_g70479_i0forward_frame_1 - 0.53 10.1 2.1 0.4 10.5 0.4 1.7 2 0 0 2 2 2 0 Fibronectin binding repeat Merozoite_SPAM PF07133.11 NODE_78412_length_201_cov_6.355422_g70471_i0reverse_frame_1 - 9.3 6.2 21.0 10 6.1 21.0 1.0 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) DUF2205 PF10224.9 NODE_78406_length_201_cov_19.156627_g70465_i0reverse_frame_1 - 0.052 13.5 0.8 0.052 13.5 0.8 1.9 1 1 1 2 2 2 0 Short coiled-coil protein Ax_dynein_light PF10211.9 NODE_78406_length_201_cov_19.156627_g70465_i0reverse_frame_1 - 0.24 11.3 9.0 0.26 11.2 9.0 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain YfhO PF09586.10 NODE_78406_length_201_cov_19.156627_g70465_i0reverse_frame_1 - 1.8 6.7 4.0 1.9 6.6 4.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF4535 PF15054.6 NODE_78406_length_201_cov_19.156627_g70465_i0reverse_frame_1 - 2.5 7.9 5.8 0.92 9.3 3.3 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) DUF3695 PF12494.8 NODE_78403_length_201_cov_23.927711_g70462_i0forward_frame_1 - 0.075 12.9 0.0 0.075 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3695) ATP-synt_DE_N PF02823.16 NODE_78395_length_201_cov_33.536145_g70454_i0forward_frame_1 - 0.15 11.9 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Histone_H2A_C PF16211.5 NODE_78389_length_201_cov_39.734940_g70448_i0reverse_frame_1 - 6 6.7 6.5 10 6.0 6.5 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A RinB PF06116.12 NODE_78374_length_201_cov_50.963855_g70433_i0forward_frame_1 - 0.043 13.9 0.7 0.073 13.2 0.7 1.4 1 0 0 1 1 1 0 Transcriptional activator RinB DUF1972 PF09314.11 NODE_78369_length_201_cov_53.668675_g70428_i0reverse_frame_1 - 0.032 13.8 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1972) ROQ_II PF18386.1 NODE_78367_length_201_cov_54.542169_g70426_i0reverse_frame_1 - 0.052 13.4 0.0 0.078 12.8 0.0 1.3 1 0 0 1 1 1 0 Roquin II domain DUF2733 PF10813.8 NODE_78363_length_201_cov_62.006024_g70422_i0forward_frame_1 - 0.56 10.0 0.2 0.56 10.0 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) DUF3719 PF12516.8 NODE_78362_length_201_cov_63.024096_g70421_i0reverse_frame_1 - 0.11 12.2 0.3 0.17 11.6 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3719) DUF3135 PF11333.8 NODE_78346_length_201_cov_104.524096_g70405_i0forward_frame_1 - 0.12 12.7 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) Orthoreo_P17 PF07272.11 NODE_78342_length_201_cov_114.349398_g70401_i0reverse_frame_1 - 0.12 12.4 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 Orthoreovirus P17 protein DUF5541 PF17695.1 NODE_78337_length_201_cov_151.493976_g70396_i0forward_frame_1 - 0.022 15.2 0.0 0.026 14.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5541) DUF5545 PF17699.1 NODE_78334_length_201_cov_169.572289_g70393_i0reverse_frame_1 - 0.14 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5545) PRCH PF03967.13 NODE_78333_length_201_cov_178.662651_g70392_i0reverse_frame_1 - 0.11 12.7 0.2 0.12 12.6 0.2 1.0 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region JTB PF05439.12 NODE_78319_length_202_cov_0.784431_g70378_i0reverse_frame_3 - 0.087 12.9 3.6 0.1 12.6 3.6 1.1 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) GCIP PF13324.6 NODE_78319_length_202_cov_0.784431_g70378_i0reverse_frame_2 - 3.9 7.0 6.5 3.8 7.0 6.5 1.0 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting zf-C3HC4 PF00097.25 NODE_78316_length_202_cov_0.886228_g70375_i0reverse_frame_3 - 0.13 12.2 6.1 0.22 11.4 6.1 1.4 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) UPF0731 PF14982.6 NODE_78312_length_202_cov_0.946108_g70371_i0forward_frame_2 - 0.14 12.4 1.7 0.16 12.1 1.7 1.1 1 0 0 1 1 1 0 UPF0731 family DUF1682 PF07946.14 NODE_78309_length_202_cov_0.952096_g70368_i0forward_frame_2 - 5.4 6.1 15.4 5.6 6.1 15.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) STAG PF08514.11 NODE_78308_length_202_cov_0.952096_g70367_i0reverse_frame_3 - 0.042 13.8 0.5 0.048 13.6 0.5 1.1 1 0 0 1 1 1 0 STAG domain Tho2 PF11262.8 NODE_78308_length_202_cov_0.952096_g70367_i0reverse_frame_3 - 0.43 9.7 3.8 0.49 9.6 3.8 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 RICTOR_phospho PF14665.6 NODE_78294_length_202_cov_0.958084_g70353_i0forward_frame_2 - 0.086 13.2 0.1 0.091 13.1 0.1 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, phosphorylation-site Urotensin_II PF02083.15 NODE_78285_length_202_cov_0.958084_g70344_i0reverse_frame_2 - 0.35 10.6 2.1 3.4 7.5 0.5 2.3 2 0 0 2 2 2 0 Urotensin II DUF2614 PF11023.8 NODE_78280_length_202_cov_0.958084_g70339_i0reverse_frame_3 - 0.059 13.5 2.0 0.057 13.5 2.0 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain NTP_transf_3 PF12804.7 NODE_78279_length_202_cov_0.958084_g70338_i0reverse_frame_2 - 0.093 13.1 0.0 0.096 13.0 0.0 1.0 1 0 0 1 1 1 0 MobA-like NTP transferase domain SGS PF05002.15 NODE_78266_length_202_cov_0.958084_g70325_i0forward_frame_2 - 0.019 15.0 0.4 0.024 14.8 0.4 1.1 1 0 0 1 1 1 0 SGS domain DUF5365 PF17326.2 NODE_78266_length_202_cov_0.958084_g70325_i0forward_frame_2 - 0.019 15.3 0.2 0.023 15.1 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5365) L27 PF02828.16 NODE_78262_length_202_cov_0.982036_g70321_i0forward_frame_3 - 0.034 13.9 1.4 1 9.2 0.9 2.2 2 0 0 2 2 2 0 L27 domain Pox_T4_N PF04491.12 NODE_78257_length_202_cov_1.005988_g70316_i0forward_frame_3 - 0.0076 16.1 0.4 0.01 15.7 0.4 1.3 1 0 0 1 1 1 1 Poxvirus T4 protein, N terminus Helicase_RecD PF05127.14 NODE_78250_length_202_cov_1.047904_g70309_i0reverse_frame_2 - 1.4e-17 64.1 0.0 1.5e-17 64.0 0.0 1.0 1 0 0 1 1 1 1 Helicase FOXO_KIX_bdg PF16675.5 NODE_78249_length_202_cov_1.053892_g70308_i0reverse_frame_2 - 0.089 13.1 0.0 0.089 13.1 0.0 1.2 1 0 0 1 1 1 0 KIX-binding domain of forkhead box O, CR2 Spore_IV_A PF09547.10 NODE_78247_length_202_cov_1.053892_g70306_i0forward_frame_2 - 0.028 13.4 0.0 0.033 13.2 0.0 1.1 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) Bromo_TP PF07524.13 NODE_78245_length_202_cov_1.059880_g70304_i0reverse_frame_2 - 0.13 12.2 0.1 0.18 11.8 0.1 1.2 1 0 0 1 1 1 0 Bromodomain associated PP2C PF00481.21 NODE_78243_length_202_cov_1.065868_g70302_i0forward_frame_2 - 1.4e-09 37.9 0.0 1.4e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Pox_A32 PF04665.12 NODE_78239_length_202_cov_1.101796_g70298_i0forward_frame_2 - 0.0076 15.7 0.1 0.0078 15.7 0.1 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein PPR_3 PF13812.6 NODE_78239_length_202_cov_1.101796_g70298_i0forward_frame_2 - 0.064 13.3 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 Pentatricopeptide repeat domain FIST PF08495.10 NODE_78236_length_202_cov_1.113772_g70295_i0forward_frame_3 - 0.13 12.3 0.2 0.15 12.1 0.2 1.0 1 0 0 1 1 1 0 FIST N domain RVT_1 PF00078.27 NODE_78235_length_202_cov_1.113772_g70294_i0forward_frame_3 - 0.003 17.1 0.0 0.003 17.1 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Hep_core_N PF08290.11 NODE_78223_length_202_cov_1.179641_g70282_i0reverse_frame_3 - 0.1 12.6 2.2 4.4 7.4 0.2 2.2 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger DDE_Tnp_IS1 PF03400.13 NODE_78223_length_202_cov_1.179641_g70282_i0reverse_frame_2 - 0.079 13.3 0.4 0.12 12.8 0.3 1.4 1 1 1 2 2 2 0 IS1 transposase RVT_1 PF00078.27 NODE_78220_length_202_cov_1.179641_g70279_i0reverse_frame_3 - 0.00011 21.9 0.0 0.00012 21.7 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) CLIP PF12032.8 NODE_78220_length_202_cov_1.179641_g70279_i0reverse_frame_2 - 0.37 11.1 3.0 13 6.1 0.1 2.1 1 1 1 2 2 2 0 Regulatory CLIP domain of proteinases DUF2911 PF11138.8 NODE_78217_length_202_cov_1.185629_g70276_i0reverse_frame_2 - 0.032 14.1 0.3 0.037 13.9 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2911) NIF PF03031.18 NODE_78212_length_202_cov_1.197605_g70271_i0reverse_frame_3 - 3.1e-16 59.5 0.4 3.3e-16 59.4 0.4 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase RNA_pol_Rpb6 PF01192.22 NODE_78212_length_202_cov_1.197605_g70271_i0forward_frame_3 - 0.16 11.9 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb6 DUF1690 PF07956.11 NODE_78212_length_202_cov_1.197605_g70271_i0forward_frame_2 - 0.11 12.9 0.2 0.13 12.6 0.2 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) HMG_box PF00505.19 NODE_78210_length_202_cov_1.197605_g70269_i0forward_frame_2 - 3.9e-05 24.0 0.3 4.9e-05 23.7 0.3 1.3 1 1 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_78210_length_202_cov_1.197605_g70269_i0forward_frame_2 - 0.053 14.1 0.1 0.063 13.9 0.1 1.2 1 0 0 1 1 1 0 HMG-box domain CHDNT PF08073.12 NODE_78210_length_202_cov_1.197605_g70269_i0forward_frame_2 - 0.15 12.0 0.3 0.15 12.0 0.3 1.9 2 0 0 2 2 2 0 CHDNT (NUC034) domain BSD PF03909.17 NODE_78209_length_202_cov_1.209581_g70268_i0reverse_frame_3 - 0.15 12.1 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 BSD domain WTF PF03303.13 NODE_78206_length_202_cov_1.239521_g70265_i0forward_frame_2 - 0.039 13.7 0.2 0.039 13.7 0.2 1.0 1 0 0 1 1 1 0 WTF protein RRN9 PF10680.9 NODE_78203_length_202_cov_1.245509_g70262_i0forward_frame_2 - 0.055 13.8 0.0 0.1 12.9 0.0 1.5 2 0 0 2 2 2 0 RNA polymerase I specific transcription initiation factor Kdo PF06293.14 NODE_78199_length_202_cov_1.269461_g70258_i0forward_frame_2 - 0.035 13.4 0.1 0.04 13.3 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RAMP4 PF06624.12 NODE_78198_length_202_cov_1.275449_g70257_i0reverse_frame_3 - 6.6 6.9 6.4 65 3.7 6.4 2.0 1 1 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Lebercilin PF15619.6 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.003 17.2 2.1 0.0033 17.1 2.1 1.1 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease SPATA1_C PF15743.5 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.004 17.2 1.2 0.0056 16.8 1.2 1.3 1 1 0 1 1 1 1 Spermatogenesis-associated C-terminus CENP-F_leu_zip PF10473.9 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.0056 16.7 4.7 0.0059 16.6 4.7 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cep57_CLD PF14073.6 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.0059 16.7 0.7 0.0065 16.5 0.7 1.1 1 0 0 1 1 1 1 Centrosome localisation domain of Cep57 Cut12 PF11500.8 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.017 15.1 1.2 0.017 15.1 1.2 1.1 1 0 0 1 1 1 0 Spindle pole body formation-associated protein Pox_A_type_inc PF04508.12 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.024 14.5 2.4 0.024 14.5 2.4 2.1 2 1 0 2 2 2 0 Viral A-type inclusion protein repeat KxDL PF10241.9 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.036 14.3 0.9 0.04 14.2 0.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein Csm1_N PF18504.1 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.29 11.5 4.5 0.27 11.6 3.0 1.6 1 1 1 2 2 2 0 Csm1 N-terminal domain Peptidase_S8 PF00082.22 NODE_78193_length_202_cov_1.305389_g70252_i0reverse_frame_2 - 0.022 14.0 0.5 0.024 13.9 0.5 1.0 1 0 0 1 1 1 0 Subtilase family MtrC PF04211.13 NODE_78190_length_202_cov_1.311377_g70249_i0reverse_frame_2 - 0.11 11.6 0.0 0.11 11.6 0.0 1.0 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit C DUF5579 PF17742.1 NODE_78189_length_202_cov_1.317365_g70248_i0forward_frame_2 - 0.023 14.3 0.1 0.025 14.2 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5579) CPT_N PF16484.5 NODE_78188_length_202_cov_1.323353_g70247_i0reverse_frame_3 - 0.15 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Carnitine O-palmitoyltransferase N-terminus Tmp39 PF10271.9 NODE_78180_length_202_cov_1.353293_g70239_i0forward_frame_2 - 0.00072 18.7 0.4 0.00078 18.6 0.4 1.0 1 0 0 1 1 1 1 Putative transmembrane protein DHO_dh PF01180.21 NODE_78179_length_202_cov_1.359281_g70238_i0forward_frame_3 - 0.16 11.1 0.0 0.16 11.1 0.0 1.0 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase Ribosomal_S7e PF01251.18 NODE_78178_length_202_cov_1.359281_g70237_i0forward_frame_3 - 0.24 11.1 0.0 0.26 11.0 0.0 1.0 1 0 0 1 1 1 0 Ribosomal protein S7e Flu_B_NS1 PF02942.14 NODE_78167_length_202_cov_1.407186_g70226_i0reverse_frame_3 - 0.00017 20.7 0.6 0.00018 20.7 0.6 1.1 1 0 0 1 1 1 1 Influenza B non-structural protein (NS1) Spc7 PF08317.11 NODE_78167_length_202_cov_1.407186_g70226_i0reverse_frame_3 - 0.002 17.1 3.6 0.0021 17.0 3.6 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Mitofilin PF09731.9 NODE_78167_length_202_cov_1.407186_g70226_i0reverse_frame_3 - 0.022 13.6 1.6 0.024 13.5 1.6 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein LepA_C PF06421.12 NODE_78167_length_202_cov_1.407186_g70226_i0reverse_frame_3 - 0.024 14.8 1.3 0.026 14.7 1.3 1.2 1 0 0 1 1 1 0 GTP-binding protein LepA C-terminus DUF2645 PF10840.8 NODE_78166_length_202_cov_1.407186_g70225_i0forward_frame_3 - 0.00021 21.9 5.8 0.00023 21.7 5.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2645) DUF4407 PF14362.6 NODE_78166_length_202_cov_1.407186_g70225_i0forward_frame_3 - 1.5 8.1 2.6 1.6 8.0 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks368.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks368.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks368.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks368.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:22:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PHM7_cyt PF14703.6 NODE_78160_length_202_cov_1.431138_g70219_i0reverse_frame_3 - 1e-06 29.1 0.1 1.1e-06 29.0 0.1 1.1 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter Pro_sub2 PF18513.1 NODE_78160_length_202_cov_1.431138_g70219_i0forward_frame_3 - 0.033 14.3 0.7 0.043 14.0 0.7 1.2 1 0 0 1 1 1 0 Prodomain subtilisin 2 Imm43 PF15570.6 NODE_78160_length_202_cov_1.431138_g70219_i0forward_frame_3 - 0.06 13.4 0.3 0.062 13.3 0.3 1.1 1 0 0 1 1 1 0 Immunity protein 43 PP2C PF00481.21 NODE_78149_length_202_cov_1.437126_g70208_i0reverse_frame_2 - 3.8e-16 59.5 0.1 3.8e-16 59.5 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C AIF_C PF14721.6 NODE_78143_length_202_cov_1.467066_g70202_i0reverse_frame_2 - 1.5 9.2 6.4 1.9 8.9 6.4 1.0 1 0 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term Peptidase_S49_N PF08496.10 NODE_78143_length_202_cov_1.467066_g70202_i0reverse_frame_2 - 6.9 6.7 12.0 7.5 6.6 12.0 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Phage_holin_3_6 PF07332.11 NODE_78143_length_202_cov_1.467066_g70202_i0forward_frame_2 - 0.57 10.2 4.3 0.57 10.2 4.3 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 NODE_78143_length_202_cov_1.467066_g70202_i0forward_frame_2 - 5.2 5.7 7.2 4.8 5.8 7.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MIOX PF05153.15 NODE_78141_length_202_cov_1.479042_g70200_i0reverse_frame_3 - 0.041 13.5 0.0 0.045 13.3 0.0 1.1 1 0 0 1 1 1 0 Myo-inositol oxygenase WD40 PF00400.32 NODE_78140_length_202_cov_1.479042_g70199_i0reverse_frame_2 - 2.3e-05 25.0 0.0 0.00044 21.0 0.0 2.0 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_78140_length_202_cov_1.479042_g70199_i0reverse_frame_2 - 0.0012 19.1 0.0 0.0013 19.0 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 NODE_78140_length_202_cov_1.479042_g70199_i0reverse_frame_2 - 0.023 14.6 0.0 0.025 14.4 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A Glycolipid_bind PF06475.11 NODE_78140_length_202_cov_1.479042_g70199_i0forward_frame_2 - 0.024 14.1 0.0 0.029 13.9 0.0 1.1 1 0 0 1 1 1 0 Putative glycolipid-binding cEGF PF12662.7 NODE_78138_length_202_cov_1.502994_g70197_i0reverse_frame_2 - 0.061 13.3 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Complement Clr-like EGF-like COP-gamma_platf PF08752.10 NODE_78132_length_202_cov_1.538922_g70191_i0forward_frame_3 - 0.073 13.2 0.1 0.13 12.3 0.0 1.4 2 0 0 2 2 2 0 Coatomer gamma subunit appendage platform subdomain Pkinase PF00069.25 NODE_78130_length_202_cov_1.544910_g70189_i0forward_frame_2 - 0.14 11.5 1.5 0.16 11.3 1.5 1.0 1 0 0 1 1 1 0 Protein kinase domain Pkinase PF00069.25 NODE_78126_length_202_cov_1.562874_g70185_i0forward_frame_3 - 4.1e-06 26.3 0.0 4.3e-06 26.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain TCR PF03638.15 NODE_78125_length_202_cov_1.562874_g70184_i0forward_frame_3 - 10 6.6 22.4 8.9 6.7 0.5 3.5 1 1 2 3 3 3 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain Phage_fiber_C PF06820.12 NODE_78123_length_202_cov_1.610778_g70182_i0forward_frame_2 - 0.17 12.2 0.0 0.22 11.9 0.0 1.2 1 0 0 1 1 1 0 Putative prophage tail fibre C-terminus DUF2301 PF10063.9 NODE_78121_length_202_cov_1.616766_g70180_i0reverse_frame_3 - 0.13 12.7 0.1 0.16 12.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized integral membrane protein (DUF2301) ddrB-ParB PF18763.1 NODE_78120_length_202_cov_1.628743_g70179_i0forward_frame_2 - 0.058 13.5 0.2 0.067 13.3 0.2 1.1 1 0 0 1 1 1 0 ddrB-like ParB superfamily domain MTA_R1 PF17226.2 NODE_78116_length_202_cov_1.658683_g70175_i0forward_frame_2 - 0.0082 16.3 0.4 0.012 15.8 0.4 1.3 1 0 0 1 1 1 1 MTA R1 domain NPC1_N PF16414.5 NODE_78116_length_202_cov_1.658683_g70175_i0forward_frame_2 - 0.012 15.1 0.1 0.014 15.0 0.1 1.0 1 0 0 1 1 1 0 Niemann-Pick C1 N terminus DUF4080 PF13311.6 NODE_78114_length_202_cov_1.670659_g70173_i0reverse_frame_2 - 0.011 15.9 0.5 0.012 15.8 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4080) SPOB_a PF14689.6 NODE_78109_length_202_cov_1.676647_g70168_i0reverse_frame_3 - 0.12 12.1 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain DUF3884 PF13024.6 NODE_78106_length_202_cov_1.676647_g70165_i0reverse_frame_2 - 0.076 12.6 0.5 0.085 12.4 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3884) VPS28 PF03997.12 NODE_78106_length_202_cov_1.676647_g70165_i0reverse_frame_2 - 0.09 12.4 0.3 0.1 12.2 0.3 1.1 1 0 0 1 1 1 0 VPS28 protein SH3_16 PF18348.1 NODE_78105_length_202_cov_1.676647_g70164_i0forward_frame_2 - 0.045 13.6 0.7 0.12 12.2 0.1 1.8 2 0 0 2 2 2 0 Bacterial dipeptidyl-peptidase Sh3 domain HJURP_C PF12347.8 NODE_78103_length_202_cov_1.688623_g70162_i0reverse_frame_3 - 0.032 14.3 0.0 0.036 14.1 0.0 1.1 1 0 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat DUF1741 PF08427.10 NODE_78103_length_202_cov_1.688623_g70162_i0reverse_frame_2 - 0.055 13.1 0.5 0.06 13.0 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1741) EF-hand_12 PF17901.1 NODE_78103_length_202_cov_1.688623_g70162_i0forward_frame_3 - 0.025 15.0 0.1 0.031 14.7 0.1 1.2 1 0 0 1 1 1 0 EF-hand fold domain FtsK_alpha PF17854.1 NODE_78102_length_202_cov_1.694611_g70161_i0forward_frame_3 - 6.2e-15 55.2 0.1 6.6e-15 55.1 0.1 1.0 1 0 0 1 1 1 1 FtsK alpha domain Lamprin PF06403.11 NODE_78101_length_202_cov_1.700599_g70160_i0forward_frame_2 - 0.072 13.1 0.7 0.073 13.0 0.7 1.1 1 0 0 1 1 1 0 Lamprin TMEM154 PF15102.6 NODE_78100_length_202_cov_1.712575_g70159_i0reverse_frame_3 - 0.068 13.1 0.4 0.072 13.0 0.4 1.1 1 0 0 1 1 1 0 TMEM154 protein family Shisa PF13908.6 NODE_78100_length_202_cov_1.712575_g70159_i0reverse_frame_3 - 0.075 13.3 0.5 0.075 13.3 0.5 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF4892 PF16234.5 NODE_78098_length_202_cov_1.730539_g70157_i0forward_frame_3 - 0.13 11.7 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4892) DUF981 PF06168.11 NODE_78097_length_202_cov_1.730539_g70156_i0forward_frame_2 - 0.0022 18.0 0.1 0.0023 17.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF981) DUF5474 PF17568.2 NODE_78096_length_202_cov_1.736527_g70155_i0reverse_frame_3 - 0.14 12.3 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5474) MPS-4 PF17523.2 NODE_78090_length_202_cov_1.790419_g70149_i0forward_frame_2 - 0.025 14.7 4.6 0.03 14.4 4.6 1.2 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Toxin_22 PF08092.11 NODE_78086_length_202_cov_1.820359_g70145_i0forward_frame_3 - 0.029 14.4 4.6 0.029 14.4 4.6 1.9 1 1 1 2 2 2 0 Magi peptide toxin family Coat_X PF07552.11 NODE_78084_length_202_cov_1.832335_g70143_i0forward_frame_3 - 0.083 12.7 1.0 0.083 12.7 1.0 1.4 2 0 0 2 2 2 0 Spore Coat Protein X and V domain Glyco_transf_24 PF18404.1 NODE_78084_length_202_cov_1.832335_g70143_i0forward_frame_2 - 0.038 13.4 0.0 0.04 13.3 0.0 1.0 1 0 0 1 1 1 0 Glucosyltransferase 24 TPR_1 PF00515.28 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 3.4e-10 39.3 0.8 2e-07 30.5 0.0 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 1.8e-09 37.0 1.8 8.2e-07 28.7 0.0 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 5e-09 35.7 0.6 8.4e-06 25.4 0.0 2.4 1 1 1 2 2 2 2 TPR repeat TPR_16 PF13432.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 2.4e-06 28.1 1.9 1e-05 26.0 0.7 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.00025 21.3 0.1 0.0015 18.8 0.1 2.0 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.00042 20.9 2.6 0.011 16.4 0.6 2.8 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.00052 20.2 0.0 0.49 10.9 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.002 18.2 0.2 0.025 14.8 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.012 14.8 0.2 0.016 14.4 0.1 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.013 16.0 0.8 0.17 12.4 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.019 15.1 0.5 0.022 14.9 0.5 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat Maf_N PF08383.11 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.023 14.4 0.6 1.4 8.7 0.0 2.2 2 0 0 2 2 2 0 Maf N-terminal region TPR_6 PF13174.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.043 14.5 0.1 0.41 11.4 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat 2_5_RNA_ligase2 PF13563.6 NODE_78083_length_202_cov_1.838323_g70142_i0forward_frame_3 - 0.06 13.3 0.5 0.34 10.8 0.2 1.9 1 1 1 2 2 2 0 2'-5' RNA ligase superfamily mono-CXXC PF15626.6 NODE_78083_length_202_cov_1.838323_g70142_i0forward_frame_3 - 1.5 9.2 8.2 1.2 9.6 0.7 2.4 2 1 0 2 2 2 0 single CXXC unit Lamprin PF06403.11 NODE_78077_length_202_cov_1.880240_g70136_i0forward_frame_2 - 0.099 12.6 15.1 0.082 12.9 7.2 2.0 1 1 1 2 2 2 0 Lamprin Sporozoite_P67 PF05642.11 NODE_78077_length_202_cov_1.880240_g70136_i0forward_frame_2 - 2.4 6.1 3.5 2.8 5.9 3.5 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen GWT1 PF06423.12 NODE_78072_length_202_cov_1.910180_g70131_i0forward_frame_2 - 3.3e-09 37.0 2.1 3.9e-09 36.8 2.1 1.1 1 0 0 1 1 1 1 GWT1 PAS_4 PF08448.10 NODE_78066_length_202_cov_1.934132_g70125_i0reverse_frame_2 - 0.011 16.0 0.0 0.012 15.9 0.0 1.1 1 0 0 1 1 1 0 PAS fold IQ PF00612.27 NODE_78062_length_202_cov_1.982036_g70121_i0reverse_frame_2 - 0.23 11.4 0.3 0.23 11.4 0.3 1.6 2 0 0 2 2 2 0 IQ calmodulin-binding motif DUF2517 PF10725.9 NODE_78062_length_202_cov_1.982036_g70121_i0forward_frame_2 - 0.085 12.6 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2517) Ribosomal_S12 PF17487.2 NODE_78061_length_202_cov_1.994012_g70120_i0forward_frame_3 - 0.15 12.8 0.4 20 6.0 0.1 2.1 2 0 0 2 2 2 0 Ribosomal protein S12 Zf_RING PF16744.5 NODE_78058_length_202_cov_2.005988_g70117_i0reverse_frame_2 - 0.0055 16.8 0.4 0.0071 16.4 0.1 1.5 1 1 0 1 1 1 1 KIAA1045 RING finger TackOD1 PF18551.1 NODE_78058_length_202_cov_2.005988_g70117_i0reverse_frame_2 - 0.011 15.5 0.1 0.011 15.5 0.1 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 DUF5417 PF17438.2 NODE_78058_length_202_cov_2.005988_g70117_i0reverse_frame_2 - 0.12 12.7 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5417) SBP_bac_3 PF00497.20 NODE_78057_length_202_cov_2.005988_g70116_i0reverse_frame_3 - 9.8e-13 48.1 0.0 1e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 DUF2701 PF10857.8 NODE_78056_length_202_cov_2.005988_g70115_i0forward_frame_2 - 0.2 11.7 0.8 0.28 11.2 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) BRF1 PF07741.13 NODE_78054_length_202_cov_2.029940_g70113_i0forward_frame_3 - 1.5 9.2 14.5 1.9 8.8 14.5 1.1 1 0 0 1 1 1 0 Brf1-like TBP-binding domain CCDC53 PF10152.9 NODE_78054_length_202_cov_2.029940_g70113_i0forward_frame_2 - 5.9 7.3 15.4 6.9 7.1 15.4 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex DNA_pol_phi PF04931.13 NODE_78054_length_202_cov_2.029940_g70113_i0forward_frame_2 - 9.1 4.2 33.0 9.5 4.2 33.0 1.0 1 0 0 1 1 1 0 DNA polymerase phi DNA_pol3_gamma3 PF12169.8 NODE_78052_length_202_cov_2.041916_g70111_i0forward_frame_2 - 7.3e-12 45.4 0.0 7.7e-12 45.3 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase III subunits gamma and tau domain III DiS_P_DiS PF06750.13 NODE_78050_length_202_cov_2.065868_g70109_i0forward_frame_3 - 0.15 12.2 1.3 1.5 9.0 1.2 1.9 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain YacG PF03884.14 NODE_78050_length_202_cov_2.065868_g70109_i0forward_frame_3 - 0.2 11.4 2.8 0.6 9.9 0.3 2.1 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG DM PF00751.18 NODE_78047_length_202_cov_2.077844_g70106_i0forward_frame_3 - 6.1 6.8 12.9 0.58 10.1 3.6 2.6 1 1 1 2 2 2 0 DM DNA binding domain GIDE PF12483.8 NODE_78039_length_202_cov_2.137725_g70098_i0reverse_frame_3 - 0.028 13.8 0.0 0.033 13.6 0.0 1.1 1 0 0 1 1 1 0 E3 Ubiquitin ligase DUF956 PF06115.11 NODE_78039_length_202_cov_2.137725_g70098_i0reverse_frame_3 - 0.042 13.6 0.0 0.049 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF956) NCD3G PF07562.14 NODE_78037_length_202_cov_2.143713_g70096_i0forward_frame_3 - 0.079 12.9 2.4 0.097 12.7 2.4 1.2 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR Pex24p PF06398.11 NODE_78034_length_202_cov_2.155689_g70093_i0reverse_frame_2 - 0.23 10.4 2.2 0.23 10.4 2.2 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin AmiS_UreI PF02293.15 NODE_78030_length_202_cov_2.245509_g70089_i0forward_frame_2 - 0.051 13.6 3.1 0.054 13.5 3.1 1.0 1 0 0 1 1 1 0 AmiS/UreI family transporter PgaD PF13994.6 NODE_78027_length_202_cov_2.257485_g70086_i0reverse_frame_2 - 0.001 19.1 0.0 0.0012 18.9 0.0 1.1 1 0 0 1 1 1 1 PgaD-like protein NADH_u_ox_C PF12853.7 NODE_78027_length_202_cov_2.257485_g70086_i0forward_frame_2 - 0.23 11.5 0.0 0.31 11.0 0.0 1.2 1 0 0 1 1 1 0 C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit DUF1908 PF08926.11 NODE_78025_length_202_cov_2.293413_g70084_i0forward_frame_2 - 0.16 11.0 1.7 0.19 10.8 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) DUF2922 PF11148.8 NODE_78022_length_202_cov_2.317365_g70081_i0forward_frame_3 - 0.042 13.6 0.0 11 5.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2922) Laminin_G_3 PF13385.6 NODE_78020_length_202_cov_2.341317_g70079_i0reverse_frame_2 - 0.0024 18.0 0.1 0.0029 17.8 0.1 1.2 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Lamprin PF06403.11 NODE_78016_length_202_cov_2.532934_g70075_i0forward_frame_2 - 0.14 12.1 7.5 0.17 11.8 7.4 1.3 1 1 0 1 1 1 0 Lamprin Glyco_transf_15 PF01793.16 NODE_78013_length_202_cov_2.592814_g70072_i0reverse_frame_3 - 0.038 13.2 1.4 0.04 13.2 1.4 1.0 1 0 0 1 1 1 0 Glycolipid 2-alpha-mannosyltransferase TMEM156 PF15106.6 NODE_78011_length_202_cov_2.610778_g70070_i0forward_frame_3 - 0.15 11.5 0.5 0.18 11.3 0.5 1.1 1 0 0 1 1 1 0 TMEM156 protein family Big_5 PF13205.6 NODE_78010_length_202_cov_2.634731_g70069_i0forward_frame_3 - 0.0032 18.1 2.7 0.004 17.8 2.7 1.1 1 0 0 1 1 1 1 Bacterial Ig-like domain REJ PF02010.15 NODE_78010_length_202_cov_2.634731_g70069_i0forward_frame_3 - 0.0033 16.3 0.5 0.0036 16.2 0.5 1.0 1 0 0 1 1 1 1 REJ domain VP40 PF07447.12 NODE_78010_length_202_cov_2.634731_g70069_i0forward_frame_3 - 0.0036 16.5 0.8 0.0039 16.3 0.8 1.0 1 0 0 1 1 1 1 Matrix protein VP40 Herpes_U59 PF04529.12 NODE_78009_length_202_cov_2.676647_g70068_i0forward_frame_2 - 0.0023 17.0 0.5 0.0025 16.9 0.5 1.0 1 0 0 1 1 1 1 Herpesvirus U59 protein DUF5440 PF17509.2 NODE_78005_length_202_cov_2.832335_g70064_i0forward_frame_3 - 0.11 12.1 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5440) DUF5000 PF16391.5 NODE_78004_length_202_cov_2.862275_g70063_i0reverse_frame_3 - 0.03 14.4 0.1 0.032 14.3 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function zf-C4pol PF14260.6 NODE_78002_length_202_cov_3.023952_g70061_i0reverse_frame_3 - 2.4e-15 56.8 8.4 2.5e-15 56.7 8.4 1.0 1 0 0 1 1 1 1 C4-type zinc-finger of DNA polymerase delta Glyco_transf_8 PF01501.20 NODE_78001_length_202_cov_3.041916_g70060_i0reverse_frame_2 - 2.5e-13 50.2 0.0 2.6e-13 50.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 8 HHV6-IE PF03753.13 NODE_77998_length_202_cov_3.113772_g70057_i0reverse_frame_3 - 1.3 6.4 4.4 1.4 6.3 4.4 1.0 1 0 0 1 1 1 0 Human herpesvirus 6 immediate early protein Lamprin PF06403.11 NODE_77997_length_202_cov_3.119760_g70056_i0reverse_frame_3 - 0.00056 19.9 7.5 0.00068 19.6 7.6 1.3 1 1 0 1 1 1 1 Lamprin NinD PF17466.2 NODE_77996_length_202_cov_3.161677_g70055_i0reverse_frame_3 - 0.18 11.9 0.1 0.24 11.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function RimK PF08443.11 NODE_77995_length_202_cov_3.185629_g70054_i0reverse_frame_2 - 1.7e-27 96.3 0.2 1.8e-27 96.2 0.2 1.0 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 NODE_77995_length_202_cov_3.185629_g70054_i0reverse_frame_2 - 7e-11 41.8 0.0 7e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_YheCD PF14398.6 NODE_77995_length_202_cov_3.185629_g70054_i0reverse_frame_2 - 0.016 14.5 0.0 0.018 14.3 0.0 1.1 1 0 0 1 1 1 0 YheC/D like ATP-grasp zf-C2H2_3 PF13878.6 NODE_77992_length_202_cov_3.263473_g70051_i0forward_frame_3 - 0.038 13.8 0.2 0.31 10.9 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF5313 PF17240.2 NODE_77989_length_202_cov_3.724551_g70048_i0forward_frame_3 - 0.095 13.1 0.1 0.12 12.8 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) BCAS3 PF12490.8 NODE_77987_length_202_cov_3.988024_g70046_i0forward_frame_3 - 0.0067 16.0 0.1 0.0067 16.0 0.1 1.0 1 0 0 1 1 1 1 Breast carcinoma amplified sequence 3 GPR15L PF15854.5 NODE_77987_length_202_cov_3.988024_g70046_i0forward_frame_3 - 0.015 15.5 0.3 0.022 15.0 0.3 1.3 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 SNARE PF05739.19 NODE_77987_length_202_cov_3.988024_g70046_i0forward_frame_3 - 0.11 12.6 3.1 0.17 11.9 0.8 2.1 2 0 0 2 2 2 0 SNARE domain RhoGEF67_u1 PF16615.5 NODE_77985_length_202_cov_4.485030_g70044_i0forward_frame_3 - 0.37 11.3 2.6 0.41 11.2 0.1 2.1 1 1 1 2 2 2 0 Unstructured region one on RhoGEF 6 and 7 RPS31 PF17067.5 NODE_77981_length_202_cov_4.964072_g70040_i0reverse_frame_3 - 0.073 13.2 0.0 0.082 13.1 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e RRP36 PF06102.12 NODE_77977_length_202_cov_11.844311_g70036_i0forward_frame_2 - 7.6e-08 32.5 7.0 8.8e-08 32.3 7.0 1.0 1 0 0 1 1 1 1 rRNA biogenesis protein RRP36 HEPN_MAE_28990 PF18737.1 NODE_77976_length_202_cov_13.730539_g70035_i0forward_frame_3 - 0.022 14.7 0.3 0.024 14.6 0.3 1.1 1 0 0 1 1 1 0 MAE_28990/MAE_18760-like HEPN LYRIC PF15686.5 NODE_77973_length_202_cov_19.784431_g70032_i0reverse_frame_3 - 0.86 9.1 10.7 0.99 8.9 10.7 1.0 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family DUF4604 PF15377.6 NODE_77973_length_202_cov_19.784431_g70032_i0reverse_frame_2 - 0.19 12.1 12.2 0.23 11.9 12.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) RE_Bsp6I PF09504.10 NODE_77972_length_202_cov_21.706587_g70031_i0reverse_frame_2 - 0.091 12.4 0.3 0.096 12.3 0.3 1.1 1 0 0 1 1 1 0 Bsp6I restriction endonuclease Pho86 PF11124.8 NODE_77972_length_202_cov_21.706587_g70031_i0forward_frame_2 - 0.092 12.2 2.6 0.091 12.2 2.6 1.0 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 AsnC_trans_reg PF01037.21 NODE_77972_length_202_cov_21.706587_g70031_i0forward_frame_2 - 0.093 12.7 0.1 8.2 6.5 0.1 2.1 1 1 1 2 2 2 0 Lrp/AsnC ligand binding domain DUF3438 PF11920.8 NODE_77972_length_202_cov_21.706587_g70031_i0forward_frame_2 - 0.2 10.9 2.0 0.22 10.7 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) Peptidase_S49_N PF08496.10 NODE_77972_length_202_cov_21.706587_g70031_i0forward_frame_2 - 0.21 11.6 6.5 0.24 11.5 6.5 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF2975 PF11188.8 NODE_77966_length_202_cov_26.604790_g70025_i0forward_frame_2 - 0.37 10.7 2.0 2.5 8.0 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) FixQ PF05545.11 NODE_77962_length_202_cov_33.850299_g70021_i0forward_frame_3 - 2.6 8.1 6.2 3.5 7.7 6.2 1.2 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ HPHLAWLY PF14925.6 NODE_77938_length_202_cov_49.173653_g69997_i0reverse_frame_2 - 0.29 9.8 1.6 0.3 9.7 1.6 1.0 1 0 0 1 1 1 0 Domain of unknown function RCC1_2 PF13540.6 NODE_77937_length_202_cov_49.694611_g69996_i0forward_frame_2 - 1.2e-07 31.4 1.5 1.9e-07 30.7 1.5 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat TMEM154 PF15102.6 NODE_77935_length_202_cov_51.047904_g69994_i0forward_frame_3 - 0.54 10.2 2.1 0.59 10.0 2.1 1.0 1 0 0 1 1 1 0 TMEM154 protein family DUF1842 PF08896.10 NODE_77929_length_202_cov_57.844311_g69988_i0reverse_frame_2 - 0.097 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1842) SBF_like PF13593.6 NODE_77928_length_202_cov_57.892216_g69987_i0forward_frame_3 - 0.0075 15.6 2.4 0.0083 15.5 2.4 1.1 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) zf-LITAF-like PF10601.9 NODE_77928_length_202_cov_57.892216_g69987_i0forward_frame_3 - 1.1 9.6 4.2 0.92 9.8 1.3 1.9 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Vpu PF00558.19 NODE_77926_length_202_cov_62.179641_g69985_i0reverse_frame_3 - 0.23 11.3 1.2 0.26 11.1 1.2 1.1 1 0 0 1 1 1 0 Vpu protein RtcR PF06956.11 NODE_77924_length_202_cov_72.473054_g69983_i0forward_frame_2 - 0.026 14.0 0.0 0.029 13.8 0.0 1.0 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase BNR_2 PF13088.6 NODE_77923_length_202_cov_80.209581_g69982_i0reverse_frame_3 - 0.02 14.2 0.0 0.021 14.1 0.0 1.0 1 0 0 1 1 1 0 BNR repeat-like domain DUF3390 PF11870.8 NODE_77921_length_202_cov_84.586826_g69980_i0forward_frame_3 - 0.083 13.3 0.1 0.1 13.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) DUSP PF06337.12 NODE_77921_length_202_cov_84.586826_g69980_i0forward_frame_2 - 0.00039 21.0 0.5 0.00045 20.8 0.5 1.1 1 0 0 1 1 1 1 DUSP domain TrmK PF04816.12 NODE_77919_length_202_cov_91.592814_g69978_i0reverse_frame_3 - 0.0035 16.9 0.4 0.0038 16.8 0.4 1.1 1 0 0 1 1 1 1 tRNA (adenine(22)-N(1))-methyltransferase DUF4294 PF14127.6 NODE_77917_length_202_cov_100.305389_g69976_i0forward_frame_3 - 0.072 13.0 0.4 0.095 12.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4294) DUF4578 PF15147.6 NODE_77914_length_202_cov_105.838323_g69973_i0reverse_frame_2 - 1 10.3 5.9 1 10.2 5.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4578) DUF1480 PF07351.13 NODE_77914_length_202_cov_105.838323_g69973_i0forward_frame_2 - 0.084 13.2 0.2 0.12 12.7 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1480) DUF4464 PF14713.6 NODE_77911_length_202_cov_111.802395_g69970_i0forward_frame_2 - 7.1e-18 65.0 0.1 7.6e-18 64.9 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4464) MAR_sialic_bdg PF10564.9 NODE_77903_length_202_cov_142.706587_g69962_i0forward_frame_2 - 0.027 14.5 0.3 0.027 14.5 0.3 1.1 1 0 0 1 1 1 0 Sialic-acid binding micronemal adhesive repeat B277 PF17623.2 NODE_77902_length_202_cov_167.886228_g69961_i0reverse_frame_2 - 0.09 11.8 0.2 0.1 11.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function FecCD PF01032.18 NODE_77897_length_202_cov_310.664671_g69956_i0forward_frame_3 - 0.0038 16.3 0.5 0.004 16.2 0.5 1.0 1 0 0 1 1 1 1 FecCD transport family DUF4312 PF14189.6 NODE_77897_length_202_cov_310.664671_g69956_i0forward_frame_3 - 0.18 11.8 1.0 0.29 11.2 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) Humanin PF15040.6 NODE_77891_length_203_cov_0.857143_g69950_i0reverse_frame_3 - 0.21 11.0 2.6 10 5.6 0.1 3.0 2 1 1 3 3 3 0 Humanin family TMEMspv1-c74-12 PF11044.8 NODE_77891_length_203_cov_0.857143_g69950_i0reverse_frame_2 - 0.1 12.6 0.3 14 5.7 0.1 2.5 2 1 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein BRX PF08381.11 NODE_77890_length_203_cov_0.892857_g69949_i0reverse_frame_2 - 0.16 11.3 0.5 0.28 10.6 0.5 1.3 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 Lamprin PF06403.11 NODE_77888_length_203_cov_0.898810_g69947_i0forward_frame_2 - 0.45 10.5 9.5 2.3 8.2 0.5 2.0 1 1 1 2 2 2 0 Lamprin DUF4441 PF14536.6 NODE_77887_length_203_cov_0.904762_g69946_i0reverse_frame_3 - 0.11 12.6 0.9 0.12 12.6 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) Pep1_7 PF17232.2 NODE_77884_length_203_cov_0.940476_g69943_i0reverse_frame_3 - 0.074 13.5 0.3 0.083 13.4 0.3 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 Sel1 PF08238.12 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 2.4e-06 28.0 0.6 0.01 16.5 0.1 2.2 2 0 0 2 2 2 2 Sel1 repeat ANAPC3 PF12895.7 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.00066 19.9 0.1 0.00081 19.6 0.1 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.0033 17.7 0.2 0.0048 17.2 0.2 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.0034 17.4 2.0 0.0058 16.7 0.1 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.0052 16.9 0.5 0.0052 16.9 0.5 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.01 15.7 0.2 0.01 15.7 0.2 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.011 15.6 0.8 0.018 14.9 0.2 1.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_3 PF07720.12 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.027 14.5 0.4 2.3 8.3 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.03 14.0 0.4 0.06 13.1 0.4 1.5 1 0 0 1 1 1 0 TPR repeat TPR_16 PF13432.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.087 13.5 0.0 0.1 13.3 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF2518 PF10726.9 NODE_77877_length_203_cov_0.946429_g69936_i0forward_frame_2 - 0.28 10.8 4.0 0.29 10.8 4.0 1.1 1 0 0 1 1 1 0 Protein of function (DUF2518) XG_FTase PF03254.13 NODE_77871_length_203_cov_0.952381_g69930_i0forward_frame_2 - 0.14 10.7 0.0 0.16 10.6 0.0 1.0 1 0 0 1 1 1 0 Xyloglucan fucosyltransferase DUF885 PF05960.11 NODE_77870_length_203_cov_0.952381_g69929_i0forward_frame_3 - 0.16 11.6 0.1 0.16 11.6 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) PNTB_4TM PF12769.7 NODE_77865_length_203_cov_0.952381_g69924_i0forward_frame_3 - 0.083 13.4 0.1 0.12 12.8 0.1 1.3 1 0 0 1 1 1 0 4TM region of pyridine nucleotide transhydrogenase, mitoch DNA_pol3_chi PF04364.13 NODE_77864_length_203_cov_0.952381_g69923_i0forward_frame_3 - 0.0091 16.2 0.0 0.0091 16.2 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase III chi subunit, HolC Lamprin PF06403.11 NODE_77859_length_203_cov_0.952381_g69918_i0forward_frame_2 - 0.16 11.9 0.0 0.19 11.7 0.0 1.0 1 0 0 1 1 1 0 Lamprin YjeF_N PF03853.15 NODE_77857_length_203_cov_0.952381_g69916_i0forward_frame_2 - 0.017 15.0 0.3 0.018 15.0 0.3 1.2 1 0 0 1 1 1 0 YjeF-related protein N-terminus DUF1590 PF07629.11 NODE_77854_length_203_cov_0.952381_g69913_i0reverse_frame_2 - 0.11 12.4 0.2 0.16 11.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1590) Orbi_VP4 PF05059.12 NODE_77853_length_203_cov_0.952381_g69912_i0reverse_frame_3 - 0.17 9.9 0.0 0.17 9.9 0.0 1.0 1 0 0 1 1 1 0 Orbivirus VP4 core protein Helicase_IV_N PF12462.8 NODE_77853_length_203_cov_0.952381_g69912_i0forward_frame_3 - 0.16 11.9 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal FSH1 PF03959.13 NODE_77850_length_203_cov_0.952381_g69909_i0reverse_frame_2 - 1.4e-05 24.9 0.0 1.4e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase (FSH1) LSM_int_assoc PF16605.5 NODE_77846_length_203_cov_0.952381_g69905_i0reverse_frame_2 - 0.18 12.0 0.2 0.3 11.2 0.2 1.5 1 1 0 1 1 1 0 LSM-interacting associated unstructured rve_3 PF13683.6 NODE_77845_length_203_cov_0.952381_g69904_i0reverse_frame_3 - 0.098 12.5 0.3 0.74 9.6 0.3 1.9 1 1 1 2 2 2 0 Integrase core domain AF-4 PF05110.13 NODE_77837_length_203_cov_1.059524_g69896_i0forward_frame_3 - 4.4 5.3 11.9 4.1 5.4 11.9 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein NhaB PF06450.12 NODE_77828_length_203_cov_1.089286_g69887_i0forward_frame_2 - 0.032 13.1 0.0 0.035 12.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial Na+/H+ antiporter B (NhaB) Prim_Zn_Ribbon PF08273.12 NODE_77826_length_203_cov_1.089286_g69885_i0forward_frame_2 - 0.048 14.0 0.5 0.072 13.4 0.5 1.3 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase zf_CopZ PF18423.1 NODE_77826_length_203_cov_1.089286_g69885_i0forward_frame_2 - 0.16 12.0 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 Zinc binding domain Toxin_16 PF07945.11 NODE_77823_length_203_cov_1.095238_g69882_i0reverse_frame_2 - 5 7.1 12.4 7.6 6.5 5.5 3.0 3 0 0 3 3 3 0 Janus-atracotoxin RRM_1 PF00076.22 NODE_77822_length_203_cov_1.119048_g69881_i0reverse_frame_3 - 0.014 15.2 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CwfJ_C_1 PF04677.15 NODE_77822_length_203_cov_1.119048_g69881_i0reverse_frame_2 - 0.016 15.1 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 TMEM40 PF15817.5 NODE_77816_length_203_cov_1.154762_g69875_i0reverse_frame_2 - 0.1 12.3 0.3 0.11 12.2 0.3 1.0 1 0 0 1 1 1 0 Transmembrane protein 40 family Rh5 PF18515.1 NODE_77815_length_203_cov_1.166667_g69874_i0reverse_frame_2 - 0.11 11.7 0.9 0.12 11.6 0.9 1.0 1 0 0 1 1 1 0 Rh5 coiled-coil domain RNase_H PF00075.24 NODE_77811_length_203_cov_1.184524_g69870_i0reverse_frame_2 - 4.1e-05 23.8 0.0 4.2e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 RNase H zinc_ribbon_5 PF13719.6 NODE_77803_length_203_cov_1.190476_g69862_i0reverse_frame_2 - 0.1 12.4 0.2 4.2 7.2 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Chitin_synth_1 PF01644.17 NODE_77801_length_203_cov_1.190476_g69860_i0forward_frame_2 - 0.079 12.9 0.1 0.09 12.7 0.1 1.1 1 0 0 1 1 1 0 Chitin synthase RPN6_N PF18055.1 NODE_77798_length_203_cov_1.190476_g69857_i0reverse_frame_3 - 0.11 12.9 0.2 0.12 12.7 0.2 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN6 N-terminal domain Pkinase PF00069.25 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_2 - 2.1e-11 43.7 0.0 2.1e-11 43.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_2 - 5.8e-08 32.3 0.0 6.2e-08 32.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pox_ser-thr_kin PF05445.11 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_2 - 2.8e-05 23.3 0.0 2.8e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase APH PF01636.23 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_2 - 0.005 16.8 0.0 0.0051 16.8 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family DUF3664 PF12406.8 NODE_77793_length_203_cov_1.220238_g69852_i0forward_frame_2 - 0.0048 17.5 2.2 0.006 17.2 2.2 1.1 1 0 0 1 1 1 1 Surface protein Sugar_tr PF00083.24 NODE_77792_length_203_cov_1.226190_g69851_i0forward_frame_2 - 0.0034 16.3 1.2 0.0037 16.2 1.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_77792_length_203_cov_1.226190_g69851_i0forward_frame_2 - 0.0056 15.7 0.8 0.0063 15.5 0.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks369.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks369.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks369.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks369.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GMC_oxred_C PF05199.13 ORF15624 - 2.2e-35 122.3 0.0 3e-35 121.8 0.0 1.2 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_N PF00732.19 ORF15624 - 3e-17 62.9 0.1 5.9e-17 62.0 0.1 1.5 2 0 0 2 2 2 1 GMC oxidoreductase NUDIX PF00293.28 ORF14744 - 2.5e-06 27.6 0.0 5.1e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 NUDIX domain tRNA_anti-like PF12869.7 ORF12612 - 0.082 12.5 0.3 0.082 12.5 0.3 2.6 2 1 1 3 3 3 0 tRNA_anti-like PARP PF00644.20 ORF10969 - 9.7e-21 74.2 0.1 2.2e-20 73.1 0.1 1.6 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DsrC PF04358.13 ORF10969 - 0.094 13.2 0.1 0.17 12.4 0.1 1.4 1 0 0 1 1 1 0 DsrC like protein Sel1 PF08238.12 ORF104539 - 7.8e-15 55.0 9.1 0.0089 16.7 1.6 5.5 5 0 0 5 5 5 4 Sel1 repeat COG6 PF06419.11 ORF102087 - 1.7e-60 205.0 0.1 1.9e-60 204.8 0.1 1.0 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 UvrD-helicase PF00580.21 ORF101379 - 0.12 11.9 10.1 0.18 11.3 10.1 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain Tankyrase_bdg_C PF15327.6 ORF101379 - 0.28 11.6 0.1 0.28 11.6 0.1 2.8 3 1 0 3 3 3 0 Tankyrase binding protein C terminal domain PIEZO PF15917.5 ORF101379 - 0.71 9.3 6.1 0.25 10.8 3.6 1.5 1 1 1 2 2 2 0 Piezo KH_1 PF00013.29 ORF100055 - 6.2e-39 131.7 0.1 1.4e-12 47.2 0.2 3.4 3 0 0 3 3 3 3 KH domain KH_2 PF07650.17 ORF100055 - 4.4e-06 26.4 3.0 0.23 11.3 0.1 3.5 2 1 0 3 3 3 3 KH domain MOEP19 PF16005.5 ORF100055 - 0.00012 22.0 0.1 0.038 14.0 0.0 2.5 3 0 0 3 3 3 2 KH-like RNA-binding domain KH_4 PF13083.6 ORF100055 - 0.00012 21.9 0.4 5.4 7.0 0.0 3.7 3 1 0 3 3 3 3 KH domain SLS PF14611.6 ORF100055 - 0.00048 20.0 0.0 0.063 13.1 0.0 2.9 2 1 0 2 2 2 1 Mitochondrial inner-membrane-bound regulator KH_5 PF13184.6 ORF100055 - 0.0067 16.5 0.5 0.98 9.5 0.1 3.0 3 0 0 3 3 3 1 NusA-like KH domain BMC PF00936.19 ORF100055 - 0.023 14.7 0.0 8.2 6.5 0.0 3.4 3 1 0 3 3 3 0 BMC domain HTH_1 PF00126.27 NODE_17052_length_1073_cov_3.991329_g12981_i0forward_frame_1 - 4.3e-19 68.2 0.2 1.5e-18 66.4 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 NODE_17052_length_1073_cov_3.991329_g12981_i0forward_frame_1 - 1.5e-05 24.5 0.5 3.4e-05 23.3 0.5 1.6 1 0 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 NODE_17052_length_1073_cov_3.991329_g12981_i0forward_frame_1 - 0.1 12.4 0.0 0.1 12.4 0.0 1.8 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain zf-C3HC4_3 PF13920.6 NODE_16980_length_1075_cov_150.666346_g12922_i0reverse_frame_3 - 2.7 7.9 12.9 3.7 7.5 7.1 2.7 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Helicase_C PF00271.31 NODE_16943_length_1076_cov_177.947166_g12892_i0forward_frame_3 - 2.5e-21 76.1 1.9 3.1e-20 72.6 0.1 2.4 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DUF3556 PF12077.8 ORF95644 - 1.9e-28 99.3 0.3 2.4e-28 98.9 0.3 1.1 1 0 0 1 1 1 1 Transmembrane protein of unknown function (DUF3556) Peptidase_C48 PF02902.19 ORF94787 - 0.0027 17.6 0.0 0.006 16.4 0.0 1.5 2 0 0 2 2 2 1 Ulp1 protease family, C-terminal catalytic domain Na_Ca_ex PF01699.24 ORF94475 - 8.7e-20 71.2 6.3 1.2e-19 70.8 6.3 1.2 1 0 0 1 1 1 1 Sodium/calcium exchanger protein Calx-beta PF03160.14 ORF94475 - 1.4e-10 41.2 0.2 2.4e-10 40.5 0.2 1.4 1 0 0 1 1 1 1 Calx-beta domain Ribosomal_L35Ae PF01247.18 ORF94475 - 0.026 14.7 0.2 0.077 13.2 0.1 1.7 2 0 0 2 2 2 0 Ribosomal protein L35Ae Pentapeptide_4 PF13599.6 ORF90770 - 0.0026 17.9 17.3 2.6 8.3 2.8 5.6 2 2 1 3 3 3 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF90770 - 0.026 14.7 21.0 4.7 7.5 0.2 6.4 5 2 0 5 5 5 0 Pentapeptide repeats (9 copies) p450 PF00067.22 ORF87836 - 2.7e-36 125.3 0.2 3.4e-36 125.0 0.2 1.0 1 0 0 1 1 1 1 Cytochrome P450 PARP PF00644.20 ORF87005 - 2.5e-20 72.9 0.1 6.2e-19 68.3 0.1 2.2 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain ACOX PF01756.19 ORF83463 - 2.4e-16 59.8 4.7 3.3e-16 59.4 2.2 2.3 2 1 0 2 2 2 1 Acyl-CoA oxidase PaO PF08417.12 ORF83463 - 0.13 12.5 0.0 0.3 11.3 0.0 1.6 1 0 0 1 1 1 0 Pheophorbide a oxygenase MIP-T3 PF10243.9 ORF83463 - 0.21 11.6 1.9 0.2 11.7 0.3 1.9 2 0 0 2 2 2 0 Microtubule-binding protein MIP-T3 CH-like domain Sugar_tr PF00083.24 ORF75856 - 5.6e-34 117.8 29.9 4.4e-23 81.9 3.8 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF75856 - 2.5e-30 105.6 55.2 3e-26 92.2 27.8 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF75856 - 1.6e-09 37.1 0.3 4.1e-06 25.9 0.0 3.2 1 1 0 2 2 2 2 MFS_1 like family MFS_2 PF13347.6 ORF75856 - 1.7e-07 30.2 28.5 2.1e-07 29.9 19.3 3.6 1 1 1 2 2 2 2 MFS/sugar transport protein RNA_pol_A_bac PF01000.26 ORF72772 - 2.8e-20 72.8 0.0 1.3e-19 70.6 0.0 2.0 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 ORF72772 - 3.7e-14 51.9 0.0 6.4e-14 51.1 0.0 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain ETF_QO PF05187.13 ORF72772 - 0.044 13.9 1.3 0.12 12.5 0.4 2.1 2 0 0 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_9 PF13187.6 ORF72772 - 0.05 13.8 1.4 0.05 13.8 1.4 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF72772 - 2 9.1 12.0 0.27 11.9 2.0 3.2 3 0 0 3 3 3 0 4Fe-4S dicluster domain Sec1 PF00995.23 ORF62742 - 3.2e-78 264.4 10.9 4.1e-78 264.1 10.9 1.1 1 0 0 1 1 1 1 Sec1 family V-ATPase_H_C PF11698.8 ORF62742 - 0.0088 16.1 1.2 0.0088 16.1 1.2 2.5 3 1 0 3 3 3 1 V-ATPase subunit H Glyco_tran_WecB PF03808.13 ORF62742 - 0.058 13.4 0.1 1.3 8.9 0.0 2.4 2 1 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family DUF1272 PF06906.11 ORF59665 - 0.011 15.8 3.8 0.026 14.6 3.8 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) Fungal_trans PF04082.18 ORF57628 - 2 7.4 9.4 0.045 12.8 1.3 2.2 2 1 0 2 2 2 0 Fungal specific transcription factor domain Chitin_synth_2 PF03142.15 ORF51882 - 0.013 14.2 2.6 0.02 13.5 2.6 1.3 1 0 0 1 1 1 0 Chitin synthase ABC2_membrane_3 PF12698.7 ORF51882 - 3.8 6.5 25.0 4.2 6.4 1.0 3.0 2 1 1 3 3 3 0 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 ORF51882 - 9.7 5.4 22.3 1.9 7.7 0.8 2.3 2 0 0 2 2 2 0 ABC-2 family transporter protein Beta_helix PF13229.6 ORF49518 - 3.1e-07 30.4 22.4 1.8e-05 24.6 20.9 2.7 1 1 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 ORF49518 - 0.00092 18.5 12.1 0.0073 15.6 11.7 2.4 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) HAD_2 PF13419.6 ORF45347 - 0.0074 16.4 0.7 0.057 13.5 0.1 2.2 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Spo0A_C PF08769.11 ORF45347 - 0.0087 16.1 0.1 0.035 14.2 0.0 2.1 2 0 0 2 2 2 1 Sporulation initiation factor Spo0A C terminal Baculo_PEP_C PF04513.12 ORF40533 - 0.0072 16.4 7.6 1.2 9.1 0.4 3.3 2 1 1 3 3 3 3 Baculovirus polyhedron envelope protein, PEP, C terminus SMC_Nse1 PF07574.13 ORF40533 - 0.048 13.5 2.7 0.12 12.3 0.9 2.5 1 1 1 2 2 2 0 Nse1 non-SMC component of SMC5-6 complex RasGAP PF00616.19 ORF40533 - 1.1 8.9 12.0 0.65 9.7 8.2 2.4 1 1 1 2 2 2 0 GTPase-activator protein for Ras-like GTPase Exonuc_VII_L PF02601.15 ORF40533 - 2.9 7.4 13.4 1.2 8.6 4.3 2.1 1 1 0 2 2 2 0 Exonuclease VII, large subunit BLOC1_2 PF10046.9 ORF40533 - 9.4 6.6 17.8 9.4 6.6 6.0 4.2 2 2 3 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 p450 PF00067.22 ORF40030 - 2.7e-36 125.3 0.2 3.4e-36 125.0 0.2 1.0 1 0 0 1 1 1 1 Cytochrome P450 Pkinase PF00069.25 ORF37092 - 6e-65 219.2 0.9 7.8e-65 218.9 0.9 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF37092 - 1.9e-35 122.4 0.1 2.8e-35 121.9 0.1 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF37092 - 2.4e-07 30.3 0.1 3.8e-07 29.7 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF37092 - 4.3e-06 25.9 2.9 5.9e-06 25.5 2.9 1.4 1 1 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF37092 - 0.00066 19.3 0.9 0.0013 18.4 0.3 1.8 2 0 0 2 2 2 1 RIO1 family Kinase-like PF14531.6 ORF37092 - 0.0013 18.2 0.0 0.0029 17.0 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF37092 - 0.0033 16.3 0.1 0.0045 15.8 0.1 1.4 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF37092 - 0.01 15.4 0.2 0.11 12.1 0.1 2.2 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF37092 - 0.041 13.8 0.0 0.061 13.2 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Nop52 PF05997.12 ORF33299 - 3.9e-38 131.4 0.2 6.4e-38 130.7 0.2 1.4 1 0 0 1 1 1 1 Nucleolar protein,Nop52 TERB2 PF15101.6 ORF33299 - 4.1 7.4 7.3 2.7 8.0 5.4 1.6 1 1 0 1 1 1 0 Telomere-associated protein TERB2 Na_Ca_ex PF01699.24 ORF30763 - 1.3e-16 60.9 15.8 2.4e-16 60.0 15.8 1.5 1 0 0 1 1 1 1 Sodium/calcium exchanger protein S1 PF00575.23 ORF28309 - 0.00022 21.5 0.1 0.00046 20.5 0.1 1.5 1 0 0 1 1 1 1 S1 RNA binding domain HSP70 PF00012.20 ORF26855 - 3.4e-88 296.4 1.0 4.1e-88 296.1 1.0 1.0 1 0 0 1 1 1 1 Hsp70 protein FGGY_C PF02782.16 ORF26855 - 0.0062 16.3 0.0 0.016 15.0 0.0 1.7 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain STPPase_N PF16891.5 ORF25432 - 0.061 13.8 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain Beta_helix PF13229.6 ORF24358 - 3.1e-07 30.4 22.1 3.2e-05 23.8 21.0 2.6 1 1 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 ORF24358 - 0.0016 17.7 12.4 0.0078 15.5 10.4 2.4 1 1 1 2 2 2 1 Periplasmic copper-binding protein (NosD) RecA PF00154.21 ORF23523 - 4.1e-142 472.3 2.5 6.7e-142 471.6 2.5 1.3 2 0 0 2 2 2 1 recA bacterial DNA recombination protein Rad51 PF08423.11 ORF23523 - 2.6e-12 46.6 0.6 7.8e-12 45.0 0.6 1.6 1 1 0 1 1 1 1 Rad51 ATPase PF06745.13 ORF23523 - 7.3e-10 38.6 0.4 3e-08 33.3 0.4 2.7 1 1 0 1 1 1 1 KaiC AAA_24 PF13479.6 ORF23523 - 7.3e-06 25.8 0.0 1.3e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 ORF23523 - 4e-05 23.7 0.0 9.7e-05 22.4 0.0 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 ORF23523 - 0.0004 20.8 0.0 0.00071 20.0 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 ORF23523 - 0.00071 19.2 0.6 0.052 13.1 0.0 2.4 1 1 0 2 2 2 1 AAA domain CbiA PF01656.23 ORF23523 - 0.011 15.8 0.0 0.028 14.5 0.0 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_35 PF14516.6 ORF23523 - 0.012 14.5 0.0 0.019 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain PAXNEB PF05625.11 ORF23523 - 0.016 14.3 0.6 0.026 13.7 0.6 1.2 1 0 0 1 1 1 0 PAXNEB protein MobB PF03205.14 ORF23523 - 0.035 14.0 0.0 0.13 12.2 0.0 1.9 1 1 1 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_22 PF13401.6 ORF23523 - 0.036 14.3 0.0 0.074 13.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF23523 - 0.037 14.5 0.0 0.076 13.4 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Ribosomal_S24e PF01282.19 ORF23523 - 0.039 13.9 0.1 0.56 10.2 0.0 2.7 2 0 0 2 2 2 0 Ribosomal protein S24e CobU PF02283.16 ORF23523 - 0.052 13.1 0.0 0.095 12.3 0.0 1.4 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_14 PF13173.6 ORF23523 - 0.054 13.5 0.0 0.17 11.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain TK PF00265.18 ORF23523 - 0.068 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Thymidine kinase DnaB_C PF03796.15 ORF23523 - 0.13 11.6 0.0 0.51 9.6 0.0 1.9 1 1 1 2 2 2 0 DnaB-like helicase C terminal domain ScsC_N PF18312.1 ORF23523 - 0.18 11.6 0.9 0.38 10.6 0.1 2.1 2 0 0 2 2 2 0 Copper resistance protein ScsC N-terminal domain DUF4476 PF14771.6 ORF21468 - 0.24 11.7 10.5 0.28 11.5 0.1 3.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4476) DUF3447 PF11929.8 ORF21468 - 0.52 10.3 12.6 1.1 9.2 3.2 4.0 2 1 0 3 3 3 0 Domain of unknown function (DUF3447) Cation_ATPase_C PF00689.21 ORF17332 - 1.2e-51 175.0 2.8 1.7e-51 174.6 2.8 1.2 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF17332 - 1.9e-08 34.8 0.0 3.7e-08 33.9 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF17332 - 2.8e-05 24.0 0.3 4e-05 23.5 0.3 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Voltage_CLC PF00654.20 ORF16099 - 2.6e-14 53.3 2.9 3.1e-14 53.0 2.9 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel COPIIcoated_ERV PF07970.12 ORF13677 - 6.2e-19 68.7 0.0 1.4e-18 67.6 0.0 1.5 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter Thioredoxin PF00085.20 ORF13677 - 3.9e-18 65.3 0.1 1.4e-17 63.6 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF13677 - 0.0014 18.9 0.1 0.0082 16.4 0.0 2.4 3 1 0 3 3 3 1 Thioredoxin-like AhpC-TSA PF00578.21 ORF13677 - 0.12 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 AhpC/TSA family OST3_OST6 PF04756.13 ORF13677 - 0.15 11.4 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Ldh_1_N PF00056.23 ORF13360 - 1.3e-33 116.0 0.0 2e-33 115.5 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF13360 - 1.1e-32 113.2 0.1 2.2e-32 112.3 0.0 1.5 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain PKD_channel PF08016.12 ORF11268 - 1.6e-05 23.8 24.3 2.9e-05 23.0 24.1 1.4 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF11268 - 5.8e-05 22.5 27.0 5.8e-05 22.5 27.0 1.5 2 0 0 2 2 2 1 Ion transport protein RCC1 PF00415.18 ORF111767 - 3.5e-46 155.6 3.2 9.1e-11 42.2 0.0 6.3 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF111767 - 3.7e-31 106.2 8.9 1.2e-09 37.7 0.3 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat GAD-like PF08887.11 ORF111767 - 0.01 15.6 0.3 0.65 9.8 0.1 2.7 3 0 0 3 3 3 0 GAD-like domain AAT PF03417.16 ORF105699 - 2.9e-17 63.1 0.0 4.1e-17 62.6 0.0 1.1 1 0 0 1 1 1 1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase p450 PF00067.22 ORF103585 - 2.7e-36 125.3 0.2 3.4e-36 125.0 0.2 1.0 1 0 0 1 1 1 1 Cytochrome P450 TSC22 PF01166.18 NODE_17142_length_1070_cov_94.766184_g13052_i0reverse_frame_1 - 0.012 15.9 0.6 0.012 15.9 0.6 4.0 3 1 1 4 4 4 0 TSC-22/dip/bun family IML1 PF12257.8 NODE_17142_length_1070_cov_94.766184_g13052_i0reverse_frame_1 - 0.033 13.3 2.4 0.063 12.4 2.4 1.6 1 0 0 1 1 1 0 Vacuolar membrane-associated protein Iml1 p450 PF00067.22 NODE_17139_length_1070_cov_111.036715_g13050_i0reverse_frame_1 - 5.2e-38 131.0 0.3 7.2e-38 130.5 0.3 1.1 1 0 0 1 1 1 1 Cytochrome P450 GSH_synthase PF03199.15 NODE_17139_length_1070_cov_111.036715_g13050_i0reverse_frame_1 - 0.03 14.8 0.1 0.074 13.5 0.1 1.7 1 0 0 1 1 1 0 Eukaryotic glutathione synthase CHASE9 PF17153.4 NODE_17139_length_1070_cov_111.036715_g13050_i0reverse_frame_1 - 0.089 12.9 0.1 0.26 11.5 0.1 1.9 1 0 0 1 1 1 0 Periplasmic sensor domain, extracellular Asp PF00026.23 NODE_17115_length_1070_cov_1252.467633_g13030_i0reverse_frame_1 - 1.1e-35 123.6 1.9 1.2e-35 123.4 1.9 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_17115_length_1070_cov_1252.467633_g13030_i0reverse_frame_1 - 2.4e-06 27.9 0.5 3.1e-05 24.3 0.1 2.5 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 NODE_17115_length_1070_cov_1252.467633_g13030_i0reverse_frame_1 - 0.16 12.7 0.0 16 6.2 0.0 2.5 2 0 0 2 2 2 0 Aspartyl protease ADIP PF11559.8 NODE_17058_length_1072_cov_747.930569_g12986_i0forward_frame_2 - 0.00087 19.4 4.0 0.00087 19.4 4.0 1.8 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding DivIC PF04977.15 NODE_17058_length_1072_cov_747.930569_g12986_i0forward_frame_2 - 0.59 9.9 5.5 0.68 9.7 0.3 2.8 2 1 0 2 2 2 0 Septum formation initiator LysR_substrate PF03466.20 NODE_17052_length_1073_cov_3.991329_g12981_i0reverse_frame_3 - 0.00048 19.5 0.1 0.00098 18.5 0.1 1.5 1 0 0 1 1 1 1 LysR substrate binding domain HEAT PF02985.22 ORF94124 - 7.8e-28 94.2 2.8 0.00096 19.2 0.1 7.4 7 0 0 7 7 7 6 HEAT repeat HEAT_2 PF13646.6 ORF94124 - 1.8e-19 69.9 0.1 9.6e-07 29.1 0.1 4.8 2 1 4 6 6 6 6 HEAT repeats Cnd1 PF12717.7 ORF94124 - 1.3e-12 48.1 0.3 0.0012 18.9 0.0 3.2 1 1 1 3 3 3 3 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF94124 - 4.7e-08 33.5 0.7 0.024 15.2 0.0 4.1 3 1 0 3 3 3 2 Vacuolar 14 Fab1-binding region Cnd3 PF12719.7 ORF94124 - 2.6e-06 26.9 1.7 2e-05 23.9 0.4 2.2 1 1 1 2 2 2 1 Nuclear condensing complex subunits, C-term domain Cohesin_HEAT PF12765.7 ORF94124 - 5.7e-06 26.5 0.0 0.084 13.2 0.0 4.4 4 0 0 4 4 4 1 HEAT repeat associated with sister chromatid cohesion RTP1_C1 PF10363.9 ORF94124 - 6e-06 26.4 0.1 0.0024 18.0 0.1 3.4 2 2 1 3 3 3 1 Required for nuclear transport of RNA pol II C-terminus 1 Adaptin_N PF01602.20 ORF94124 - 0.00023 19.9 1.5 0.0023 16.6 0.1 2.3 1 1 2 3 3 3 2 Adaptin N terminal region HEAT_EZ PF13513.6 ORF94124 - 0.00056 20.3 0.3 0.93 10.1 0.0 4.1 4 0 0 4 4 4 1 HEAT-like repeat Arm PF00514.23 ORF94124 - 0.047 13.7 0.4 4.6 7.4 0.0 3.5 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat RicinB_lectin_2 PF14200.6 ORF92907 - 6e-05 23.7 0.4 0.41 11.4 0.1 2.6 2 0 0 2 2 2 2 Ricin-type beta-trefoil lectin domain-like Somatomedin_B PF01033.17 ORF92907 - 0.016 15.6 12.7 0.016 15.6 12.7 3.1 3 0 0 3 3 3 0 Somatomedin B domain MFS_1 PF07690.16 ORF91434 - 3.7e-30 105.1 39.8 5.8e-30 104.4 38.5 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF91434 - 1.2e-09 37.5 18.6 5.6e-09 35.4 3.4 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 ORF91434 - 0.054 11.9 20.5 0.014 13.9 12.7 2.0 1 1 1 2 2 2 0 Transmembrane secretion effector LacY_symp PF01306.19 ORF91434 - 0.52 9.0 11.9 2 7.1 1.2 2.2 1 1 1 2 2 2 0 LacY proton/sugar symporter SpoVAB PF13782.6 ORF91434 - 0.89 9.9 0.0 0.89 9.9 0.0 3.4 4 1 0 4 4 4 0 Stage V sporulation protein AB VWA PF00092.28 ORF86089 - 0.00017 21.9 0.0 0.00025 21.3 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain Med25_VWA PF11265.8 ORF86089 - 0.00018 21.4 0.0 0.00036 20.4 0.0 1.5 1 0 0 1 1 1 1 Mediator complex subunit 25 von Willebrand factor type A VWA_2 PF13519.6 ORF86089 - 0.00095 19.8 0.0 0.002 18.7 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain adh_short PF00106.25 ORF86033 - 7.1e-21 74.6 0.1 3.9e-18 65.6 0.1 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF86033 - 4.7e-14 52.5 0.0 6.9e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF86033 - 0.00058 19.8 0.0 0.00099 19.1 0.0 1.3 1 0 0 1 1 1 1 KR domain Pkinase PF00069.25 ORF83761 - 1e-44 152.9 3.6 1.6e-21 76.9 0.0 2.4 3 0 0 3 3 3 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83761 - 1e-20 74.1 0.1 6.4e-12 45.3 0.0 2.2 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF83761 - 1.5e-07 31.1 1.0 0.00024 20.5 0.0 2.8 1 1 1 3 3 3 2 Kinase-like Kdo PF06293.14 ORF83761 - 0.00047 19.6 0.1 0.00084 18.7 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF83761 - 0.0014 17.7 0.3 0.0026 16.7 0.3 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 ORF83761 - 0.012 14.7 0.1 0.024 13.7 0.1 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 Peptidase_M15_2 PF05951.13 ORF83761 - 0.021 14.5 0.3 0.17 11.5 0.1 2.3 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF882) APH PF01636.23 ORF83761 - 0.029 14.3 0.0 0.048 13.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF83761 - 0.036 12.8 0.3 0.063 12.0 0.3 1.3 1 0 0 1 1 1 0 Fungal protein kinase Pox_ser-thr_kin PF05445.11 ORF83761 - 0.073 12.0 6.2 0.89 8.4 0.4 2.6 2 1 0 2 2 2 0 Poxvirus serine/threonine protein kinase Ank_4 PF13637.6 ORF80067 - 3.3e-14 53.0 2.6 5.5e-05 23.6 0.0 4.9 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF80067 - 1e-13 51.7 3.4 0.0003 21.3 0.0 4.1 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF80067 - 8.8e-10 38.7 9.9 0.004 17.4 0.0 4.9 4 1 1 5 5 5 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF80067 - 4.6e-09 35.8 6.4 0.00072 19.8 0.0 6.0 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF80067 - 1.2e-06 28.7 6.0 0.014 15.8 0.0 5.1 5 0 0 5 5 5 2 Ankyrin repeat His_Phos_1 PF00300.22 ORF77699 - 9.3e-14 51.6 0.1 1.4e-06 28.2 0.2 2.8 2 1 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) TPR_12 PF13424.6 ORF75087 - 0.0047 17.2 10.7 0.011 16.0 8.7 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF75087 - 0.011 16.5 13.9 0.046 14.6 0.5 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF75087 - 0.012 15.7 0.4 10 6.6 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF75087 - 0.057 13.3 11.9 0.49 10.3 0.4 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF75087 - 0.13 12.2 0.8 1.4 8.9 0.3 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat DnaG_DnaB_bind PF08278.11 ORF75087 - 0.2 12.3 7.7 0.6 10.7 5.0 2.7 3 0 0 3 3 3 0 DNA primase DnaG DnaB-binding TPR_2 PF07719.17 ORF75087 - 0.33 11.2 5.3 14 6.0 0.1 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF75087 - 0.85 10.3 12.0 3.5 8.4 11.6 2.2 2 1 0 2 2 2 0 Tetratricopeptide repeat Metallophos PF00149.28 ORF72905 - 4.1e-13 50.3 3.6 8.1e-13 49.3 3.6 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Glyoxalase PF00903.25 ORF72366 - 1.3e-35 122.4 0.0 1.9e-18 66.9 0.0 2.5 2 1 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF72366 - 1e-11 45.0 0.1 0.00066 19.9 0.1 3.9 2 2 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 ORF72366 - 0.00036 21.3 0.0 0.22 12.3 0.0 3.5 2 2 0 2 2 2 1 Glyoxalase-like domain CppA_N PF14506.6 ORF72366 - 0.0039 17.2 0.0 0.57 10.3 0.0 2.3 2 0 0 2 2 2 2 CppA N-terminal Glyoxalase_3 PF13468.6 ORF72366 - 0.14 12.3 0.0 0.74 9.9 0.0 2.1 2 0 0 2 2 2 0 Glyoxalase-like domain Dus PF01207.17 ORF69174 - 3.7e-69 233.2 0.0 4.4e-69 232.9 0.0 1.1 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 ORF69174 - 1.2e-05 24.9 0.0 1.9e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 ORF69174 - 0.0038 16.7 0.0 0.0078 15.6 0.0 1.5 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator FMN_dh PF01070.18 ORF69174 - 0.0059 15.7 0.0 0.011 14.8 0.0 1.4 1 1 0 1 1 1 1 FMN-dependent dehydrogenase ThiG PF05690.14 ORF69174 - 0.0072 15.7 0.0 0.011 15.0 0.0 1.2 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 ORF69174 - 0.008 15.2 0.0 0.012 14.7 0.0 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain TMP-TENI PF02581.17 ORF69174 - 0.06 12.7 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 Thiamine monophosphate synthase NMO PF03060.15 ORF69174 - 0.15 11.4 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 Nitronate monooxygenase DUF4201 PF13870.6 ORF65486 - 1.2e-32 113.1 25.3 1.2e-32 113.1 25.3 2.8 3 0 0 3 3 3 1 Domain of unknown function (DUF4201) Lebercilin PF15619.6 ORF65486 - 0.00025 20.8 9.4 0.00025 20.8 9.4 2.9 1 1 2 3 3 3 1 Ciliary protein causing Leber congenital amaurosis disease SecD-TM1 PF13721.6 ORF65486 - 0.0016 18.9 1.0 0.0016 18.9 1.0 2.5 1 1 0 2 2 2 1 SecD export protein N-terminal TM region TMF_TATA_bd PF12325.8 ORF65486 - 0.021 15.1 8.3 0.021 15.1 8.3 4.8 3 1 1 4 4 4 0 TATA element modulatory factor 1 TATA binding Tropomyosin_1 PF12718.7 ORF65486 - 0.029 14.5 4.9 0.029 14.5 4.9 5.1 1 1 2 4 4 4 0 Tropomyosin like LPD22 PF18834.1 ORF65486 - 0.041 14.1 7.1 0.066 13.4 0.1 3.5 3 1 0 3 3 3 0 Large polyvalent protein associated domain 22 Myelin-PO_C PF10570.9 ORF65486 - 0.043 14.3 2.9 0.71 10.3 0.1 2.8 2 0 0 2 2 2 0 Myelin-PO cytoplasmic C-term p65 binding region YabA PF06156.13 ORF65486 - 0.14 12.8 26.9 0.44 11.2 0.1 5.1 2 1 3 5 5 5 0 Initiation control protein YabA YfiO PF13525.6 ORF65486 - 0.44 10.2 12.5 0.31 10.7 0.8 3.3 2 1 0 3 3 3 0 Outer membrane lipoprotein ATG16 PF08614.11 ORF65486 - 3.4 7.9 41.9 1.1 9.5 11.7 3.9 2 1 2 4 4 4 0 Autophagy protein 16 (ATG16) Tli4_N PF18443.1 ORF65486 - 9.2 6.6 11.1 1.3e+02 2.9 11.1 2.8 1 1 0 1 1 1 0 Tle cognate immunity protein 4 N-terminal domain ADH_zinc_N_2 PF13602.6 ORF63343 - 2.8e-14 54.3 0.0 5.4e-13 50.2 0.0 2.2 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 ORF63343 - 7.2e-09 35.7 0.0 1.8e-08 34.5 0.1 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF63343 - 0.00074 19.4 0.0 0.024 14.5 0.0 2.6 1 1 1 2 2 2 2 Alcohol dehydrogenase GroES-like domain VWA PF00092.28 ORF52410 - 0.00017 21.9 0.0 0.00025 21.3 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain Med25_VWA PF11265.8 ORF52410 - 0.00018 21.4 0.0 0.00036 20.4 0.0 1.5 1 0 0 1 1 1 1 Mediator complex subunit 25 von Willebrand factor type A VWA_2 PF13519.6 ORF52410 - 0.00095 19.8 0.0 0.002 18.7 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain EcKinase PF02958.20 ORF50189 - 3.1e-15 56.3 0.0 4.2e-15 55.8 0.0 1.1 1 0 0 1 1 1 1 Ecdysteroid kinase DUF1679 PF07914.11 ORF50189 - 7.6e-14 51.4 0.0 9.8e-14 51.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) APH PF01636.23 ORF50189 - 3.7e-08 33.6 0.4 5.4e-08 33.1 0.4 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_1 PF00036.32 ORF4799 - 8.9e-21 71.8 4.1 3.7e-05 23.0 0.0 6.7 7 0 0 7 7 7 4 EF hand EF-hand_7 PF13499.6 ORF4799 - 5e-20 71.7 7.1 4.2e-08 33.5 0.1 4.7 3 2 2 5 5 5 5 EF-hand domain pair EF-hand_6 PF13405.6 ORF4799 - 1.8e-19 68.0 7.5 8.1e-05 22.3 0.0 6.7 7 0 0 7 7 7 5 EF-hand domain EF-hand_5 PF13202.6 ORF4799 - 3e-13 48.6 7.4 8.5e-06 25.0 0.0 5.5 7 0 0 7 7 7 2 EF hand EF-hand_8 PF13833.6 ORF4799 - 2.9e-11 43.0 6.4 0.0014 18.4 0.1 5.2 4 2 2 6 6 6 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF4799 - 0.0011 19.3 1.9 0.11 12.8 0.0 2.7 3 0 0 3 3 3 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF4799 - 0.0017 19.2 0.1 0.85 10.5 0.0 3.1 4 0 0 4 4 4 1 EF-hand domain NLRC4_HD2 PF17776.1 ORF4799 - 0.014 15.9 0.1 0.039 14.5 0.1 1.7 1 0 0 1 1 1 0 NLRC4 helical domain HD2 KASH PF10541.9 ORF47106 - 0.64 10.3 3.7 0.56 10.5 0.9 2.3 2 0 0 2 2 2 0 Nuclear envelope localisation domain HPP PF04982.13 ORF46854 - 1.3e-62 209.4 23.9 1.8e-31 108.8 9.5 2.4 3 0 0 3 3 3 2 HPP family RELT PF12606.8 ORF46854 - 0.046 12.7 0.2 0.18 10.8 0.2 2.0 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Transgly_assoc PF04226.13 ORF46854 - 0.075 13.3 0.8 0.075 13.3 0.8 4.6 5 0 0 5 5 5 0 Transglycosylase associated protein Ank_2 PF12796.7 ORF44290 - 9.4e-47 157.5 11.6 3e-12 47.0 0.1 4.5 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF44290 - 6.6e-41 138.2 15.6 3.3e-10 40.3 0.2 5.6 3 1 3 7 7 7 6 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF44290 - 4.4e-37 125.7 12.0 1.1e-08 35.1 0.0 6.7 1 1 7 8 8 8 8 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF44290 - 2.4e-35 116.5 8.4 0.00036 20.7 0.0 8.5 8 0 0 8 8 8 8 Ankyrin repeat Ank PF00023.30 ORF44290 - 4.2e-34 115.5 21.9 5.7e-05 23.4 0.3 8.4 8 0 0 8 8 8 8 Ankyrin repeat DUF2384 PF09722.10 ORF44290 - 0.0081 16.2 0.1 30 4.7 0.0 4.1 4 0 0 4 4 4 0 Protein of unknown function (DUF2384) Photo_RC PF00124.19 ORF42870 - 3.8e-66 223.0 21.0 4.5e-66 222.7 21.0 1.0 1 0 0 1 1 1 1 Photosynthetic reaction centre protein PEMT PF04191.13 ORF42870 - 0.019 15.3 1.7 0.019 15.3 1.7 2.8 4 0 0 4 4 4 0 Phospholipid methyltransferase Metallophos PF00149.28 ORF41433 - 4.1e-13 50.3 3.6 8.1e-13 49.3 3.6 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Photo_RC PF00124.19 ORF41020 - 3.8e-66 223.0 21.0 4.5e-66 222.7 21.0 1.0 1 0 0 1 1 1 1 Photosynthetic reaction centre protein PEMT PF04191.13 ORF41020 - 0.019 15.3 1.7 0.019 15.3 1.7 2.8 4 0 0 4 4 4 0 Phospholipid methyltransferase IncFII_repA PF02387.15 ORF3820 - 0.056 12.7 3.1 0.099 11.9 3.1 1.4 1 0 0 1 1 1 0 IncFII RepA protein family DUF778 PF05608.12 ORF3820 - 0.077 13.4 7.1 0.049 14.0 3.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF778) DivIC PF04977.15 ORF3820 - 0.3 10.9 7.0 0.17 11.6 1.4 2.6 2 0 0 2 2 2 0 Septum formation initiator WDCP PF15390.6 ORF3820 - 0.64 8.3 8.2 0.087 11.2 2.3 1.9 2 0 0 2 2 2 0 WD repeat and coiled-coil-containing protein family Trypan_PARP PF05887.11 ORF3820 - 1.6 8.7 7.6 2.8 7.9 7.6 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) TPR_12 PF13424.6 ORF37936 - 0.0047 17.2 10.7 0.011 16.0 8.7 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF37936 - 0.011 16.5 13.9 0.046 14.6 0.5 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF37936 - 0.012 15.7 0.4 10 6.6 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF37936 - 0.057 13.3 11.9 0.49 10.3 0.4 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF37936 - 0.13 12.2 0.8 1.4 8.9 0.3 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat DnaG_DnaB_bind PF08278.11 ORF37936 - 0.2 12.3 7.7 0.6 10.7 5.0 2.7 3 0 0 3 3 3 0 DNA primase DnaG DnaB-binding TPR_2 PF07719.17 ORF37936 - 0.33 11.2 5.3 14 6.0 0.1 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF37936 - 0.85 10.3 12.0 3.5 8.4 11.6 2.2 2 1 0 2 2 2 0 Tetratricopeptide repeat Spc29 PF17082.5 ORF35661 - 0.0029 17.5 2.2 0.55 10.0 0.4 2.2 2 0 0 2 2 2 2 Spindle Pole Component 29 Exonuc_VII_L PF02601.15 ORF35661 - 0.026 14.1 9.4 0.056 13.0 9.4 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit Med28 PF11594.8 ORF35661 - 0.037 14.1 1.8 0.58 10.2 0.3 2.1 1 1 1 2 2 2 0 Mediator complex subunit 28 DUF1664 PF07889.12 ORF35661 - 0.15 12.1 1.8 1.1 9.4 0.6 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) ISG65-75 PF11727.8 ORF35661 - 0.68 9.1 9.5 0.49 9.6 6.7 1.9 1 1 1 2 2 2 0 Invariant surface glycoprotein DUF948 PF06103.11 ORF35661 - 0.74 10.1 2.4 2 8.7 0.3 2.6 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) COG2 PF06148.11 ORF35661 - 0.88 9.7 10.4 2.8 8.1 3.3 2.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Prominin PF05478.11 ORF35661 - 1.4 6.7 3.7 3 5.7 3.7 1.4 1 1 0 1 1 1 0 Prominin Spc7 PF08317.11 ORF35661 - 2.1 7.1 13.4 0.69 8.7 5.0 2.0 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF3584 PF12128.8 ORF35661 - 6.4 4.2 17.2 25 2.2 17.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) WD40 PF00400.32 ORF30156 - 0.00033 21.4 5.8 1.1 10.2 0.1 5.1 5 1 0 5 5 5 2 WD domain, G-beta repeat CRAL_TRIO PF00650.20 ORF26789 - 1.5e-23 83.3 0.0 2e-23 82.9 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF26789 - 0.00011 22.3 0.0 0.00019 21.6 0.0 1.3 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain Patatin PF01734.22 ORF2128 - 2.3e-17 63.8 0.3 5.6e-17 62.6 0.3 1.6 1 1 0 1 1 1 1 Patatin-like phospholipase Actin PF00022.19 ORF19701 - 1.6e-86 290.5 0.0 1.3e-85 287.5 0.0 1.8 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF19701 - 0.0042 16.0 0.0 0.024 13.5 0.0 2.0 1 1 0 1 1 1 1 MreB/Mbl protein GDPD PF03009.17 ORF19672 - 1.5e-32 113.4 0.3 2e-32 113.0 0.3 1.2 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family GDPD PF03009.17 ORF19521 - 1.5e-32 113.4 0.3 2e-32 113.0 0.3 1.2 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family SMC_N PF02463.19 ORF18916 - 1.6e-41 142.2 0.0 1.9e-41 141.9 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF18916 - 9.8e-10 38.7 0.0 1.1e-09 38.5 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 ORF18916 - 3.9e-08 34.0 0.5 1.9e-07 31.8 0.2 2.2 3 1 1 4 4 4 1 AAA domain AAA_21 PF13304.6 ORF18916 - 1.5e-06 28.3 0.0 4e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_27 PF13514.6 ORF18916 - 8.5e-06 25.5 0.1 1.5e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF18916 - 0.0006 19.5 0.1 0.0027 17.4 0.0 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_tran PF00005.27 ORF18916 - 0.0035 17.9 0.1 0.026 15.1 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_16 PF13191.6 ORF18916 - 0.06 13.7 2.7 0.29 11.5 0.0 2.6 2 1 0 2 2 2 0 AAA ATPase domain AAA_13 PF13166.6 ORF18916 - 0.068 11.8 0.0 0.15 10.7 0.0 1.5 2 0 0 2 2 2 0 AAA domain DNA_methylase PF00145.17 ORF17301 - 0.05 12.9 0.0 0.47 9.7 0.0 2.1 2 0 0 2 2 2 0 C-5 cytosine-specific DNA methylase VWA PF00092.28 ORF15603 - 0.00017 21.9 0.0 0.00025 21.3 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain Med25_VWA PF11265.8 ORF15603 - 0.00018 21.4 0.0 0.00036 20.4 0.0 1.5 1 0 0 1 1 1 1 Mediator complex subunit 25 von Willebrand factor type A VWA_2 PF13519.6 ORF15603 - 0.00095 19.8 0.0 0.002 18.7 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain Bax1-I PF01027.20 NODE_17271_length_1066_cov_2.602328_g13157_i0forward_frame_1 - 4e-12 46.4 16.7 6.8e-12 45.7 16.7 1.4 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 NODE_17271_length_1066_cov_2.602328_g13157_i0forward_frame_1 - 0.0017 17.9 2.5 0.0017 17.9 2.5 1.6 2 0 0 2 2 2 1 Bax inhibitor 1 like Birna_VP3 PF01767.16 NODE_17269_length_1066_cov_5.702231_g13155_i0forward_frame_1 - 0.55 10.3 3.6 0.32 11.1 0.5 1.9 2 0 0 2 2 2 0 Birnavirus VP3 protein Osmo_CC PF08946.10 NODE_17261_length_1066_cov_143.039767_g11789_i1reverse_frame_1 - 1.1 9.6 14.2 0.083 13.2 1.6 2.9 2 0 0 2 2 2 0 Osmosensory transporter coiled coil Kinesin PF00225.23 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_1 - 1.2e-31 109.9 1.1 1.5e-31 109.6 0.1 1.6 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_1 - 7.9e-15 55.1 0.0 1.9e-14 53.9 0.0 1.6 1 0 0 1 1 1 1 Microtubule binding AMP-binding PF00501.28 NODE_17150_length_1070_cov_3.346860_g13059_i0forward_frame_3 - 2.7e-43 148.1 0.0 3.4e-43 147.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme YdiH PF15930.5 NODE_17150_length_1070_cov_3.346860_g13059_i0forward_frame_3 - 0.23 11.6 0.7 0.52 10.5 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function GCIP PF13324.6 NODE_17139_length_1070_cov_111.036715_g13050_i0reverse_frame_2 - 0.062 12.9 0.1 0.096 12.3 0.1 1.3 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting Sigma54_activat PF00158.26 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 4.9e-69 231.3 0.0 7.3e-69 230.8 0.0 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 1.4e-22 80.3 0.0 5.5e-22 78.4 0.0 1.9 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 1.6e-06 28.2 0.0 3.6e-06 27.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) HTH_8 PF02954.19 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 3.2e-06 26.8 0.8 7.5e-06 25.6 0.8 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family AAA_16 PF13191.6 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 2.8e-05 24.5 0.1 8.9e-05 22.9 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 3.3e-05 23.4 0.1 0.002 17.6 0.1 2.2 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 4.7e-05 23.8 0.0 8.4e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) HTH_50 PF18024.1 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 0.00026 20.6 0.0 0.00058 19.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain AAA_2 PF07724.14 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 0.02 15.0 0.2 0.077 13.1 0.0 2.0 2 1 0 2 2 2 0 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 0.026 14.0 0.1 0.068 12.7 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_29 PF13555.6 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 0.041 13.6 0.1 7.9 6.3 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_22 PF13401.6 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 0.065 13.5 0.4 0.49 10.7 0.0 2.4 2 1 0 2 2 2 0 AAA domain MCM PF00493.23 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 0.067 12.3 0.0 0.14 11.2 0.0 1.5 1 1 0 1 1 1 0 MCM P-loop domain TIP49 PF06068.13 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 0.079 12.1 0.0 0.16 11.1 0.0 1.5 2 0 0 2 2 2 0 TIP49 P-loop domain DUF815 PF05673.13 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 0.14 11.3 0.0 0.24 10.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_19 PF13245.6 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_3 - 0.15 12.3 0.2 1.7 9.0 0.1 2.3 2 1 0 2 2 2 0 AAA domain Toxin_3 PF00537.18 NODE_17111_length_1071_cov_2.606178_g13029_i0forward_frame_2 - 0.085 13.1 2.3 0.33 11.2 0.9 2.7 1 1 1 2 2 2 0 Scorpion toxin-like domain Glycolytic PF00274.19 ORF9987 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Glycolytic PF00274.19 ORF99175 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Citrate_synt PF00285.21 ORF97232 - 8.6e-103 344.2 0.4 9.7e-103 344.0 0.4 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF4607 PF15380.6 ORF97232 - 0.13 11.7 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4607) Glycolytic PF00274.19 ORF96700 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I TTSSLRR PF12468.8 ORF93362 - 0.016 15.4 3.6 0.088 13.1 3.6 2.2 1 0 0 1 1 1 0 Type III secretion system leucine rich repeat protein AA_permease_2 PF13520.6 ORF93122 - 1.5e-18 66.9 39.4 1.8e-18 66.6 39.4 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF93122 - 4.7e-09 35.4 34.4 7.7e-09 34.7 34.4 1.3 1 1 0 1 1 1 1 Amino acid permease DIOX_N PF14226.6 ORF8641 - 2.4e-24 86.3 0.0 3.5e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal 2OG-FeII_Oxy PF03171.20 ORF8641 - 8.8e-21 74.3 0.1 2.1e-20 73.1 0.0 1.7 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily ArfGap PF01412.18 ORF85719 - 0.0011 19.0 0.4 0.0011 19.0 0.4 2.3 2 0 0 2 2 2 1 Putative GTPase activating protein for Arf DUF3391 PF11871.8 ORF85719 - 0.0077 16.8 3.2 0.013 16.0 3.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3391) Peptidase_S49_N PF08496.10 ORF85719 - 0.84 9.7 7.6 1.4 9.0 7.6 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Glycolytic PF00274.19 ORF82818 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I ADH_N PF08240.12 ORF82070 - 1.3e-27 95.8 5.1 2.6e-27 94.9 5.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF82070 - 1.1e-20 74.0 0.0 2.1e-20 73.0 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 ORF82070 - 0.00024 20.5 0.1 0.00036 19.9 0.1 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF82070 - 0.00059 20.0 0.3 0.0013 18.9 0.3 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 ORF82070 - 0.0054 16.1 0.2 0.0095 15.2 0.2 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ADH_zinc_N_2 PF13602.6 ORF82070 - 0.023 15.7 0.0 0.046 14.8 0.0 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase adh_short PF00106.25 ORF82070 - 0.024 14.1 0.0 0.036 13.5 0.0 1.2 1 0 0 1 1 1 0 short chain dehydrogenase Shikimate_DH PF01488.20 ORF82070 - 0.024 14.7 0.0 0.039 14.0 0.0 1.2 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase XdhC_C PF13478.6 ORF82070 - 0.05 14.1 0.0 0.089 13.3 0.0 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain Glu_dehyd_C PF16912.5 ORF82070 - 0.062 12.8 0.0 0.092 12.2 0.0 1.2 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus sCache_3_2 PF17203.4 ORF79720 - 7.6e-22 78.0 0.3 1.9e-21 76.6 0.0 1.8 2 0 0 2 2 2 1 Single cache domain 3 SPOB_a PF14689.6 ORF79720 - 9.2e-08 31.7 1.7 2.3e-07 30.4 1.7 1.7 1 0 0 1 1 1 1 Sensor_kinase_SpoOB-type, alpha-helical domain PAS_4 PF08448.10 ORF79720 - 5.2e-06 26.7 0.0 0.0093 16.2 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.7 ORF79720 - 5.3e-06 26.6 0.0 0.0028 17.9 0.0 2.5 2 0 0 2 2 2 2 PAS domain PAS PF00989.25 ORF79720 - 3.3e-05 23.8 0.0 0.00011 22.2 0.0 1.9 2 0 0 2 2 2 1 PAS fold dCache_1 PF02743.18 ORF79720 - 0.00065 19.6 0.9 0.0039 17.0 0.1 2.4 2 1 1 3 3 3 1 Cache domain PAS_8 PF13188.7 ORF79720 - 0.00091 19.2 0.0 0.0031 17.5 0.0 1.9 2 0 0 2 2 2 1 PAS domain dCache_3 PF14827.6 ORF79720 - 0.0016 18.2 1.8 0.0047 16.6 0.1 2.5 2 1 0 2 2 2 1 Double sensory domain of two-component sensor kinase sCache_3_3 PF17202.4 ORF79720 - 0.012 16.1 0.0 0.032 14.7 0.0 1.7 1 0 0 1 1 1 0 Single cache domain 3 HemY_N PF07219.13 ORF79720 - 0.016 15.4 2.0 0.086 13.0 0.1 2.3 2 0 0 2 2 2 0 HemY protein N-terminus Cache_3-Cache_2 PF17201.4 ORF79720 - 0.02 14.1 0.0 0.088 12.1 0.0 2.0 2 1 1 3 3 3 0 Cache 3/Cache 2 fusion domain CBS PF00571.28 ORF79720 - 0.13 12.7 0.1 0.32 11.5 0.1 1.7 1 0 0 1 1 1 0 CBS domain Glycolytic PF00274.19 ORF78491 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I PIN_8 PF18476.1 ORF75370 - 0.0055 16.6 0.9 0.0076 16.1 0.9 1.1 1 0 0 1 1 1 1 PIN like domain PTPS PF01242.19 ORF75370 - 0.018 15.0 0.1 0.066 13.2 0.1 1.9 1 1 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase OEP PF02321.18 ORF75370 - 0.12 12.2 4.9 0.19 11.5 4.9 1.2 1 0 0 1 1 1 0 Outer membrane efflux protein Lactamase_B_3 PF13483.6 ORF71409 - 1.9e-15 57.2 0.1 2.5e-15 56.8 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 ORF71409 - 8.9e-13 48.2 0.3 1.2e-12 47.8 0.3 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 ORF71409 - 0.03 14.3 1.8 0.082 12.9 1.5 1.8 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily Lon_C PF05362.13 ORF67999 - 8.4e-69 231.2 1.1 3.7e-46 157.2 0.1 2.4 3 0 0 3 3 3 2 Lon protease (S16) C-terminal proteolytic domain ChlI PF13541.6 ORF67999 - 3e-08 33.5 0.1 1.8e-07 31.0 0.0 2.2 1 1 1 2 2 2 1 Subunit ChlI of Mg-chelatase Pyridoxal_deC PF00282.19 ORF67999 - 0.14 10.9 0.1 0.33 9.6 0.0 1.5 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain DUF179 PF02622.15 ORF66563 - 5.2e-19 68.8 0.0 1.1e-18 67.7 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 Antimicrobial12 PF08107.11 ORF66563 - 0.057 13.2 0.0 0.16 11.7 0.0 1.7 1 0 0 1 1 1 0 Pleurocidin family Peptidase_M42 PF05343.14 ORF65180 - 9.5e-102 339.9 0.0 1.1e-101 339.7 0.0 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 ORF65180 - 0.0042 16.8 0.0 0.019 14.7 0.0 2.0 2 0 0 2 2 2 1 Peptidase family M28 FHA PF00498.26 ORF65099 - 1.6e-10 41.2 0.3 5.9e-10 39.4 0.2 2.0 2 0 0 2 2 2 1 FHA domain RINGv PF12906.7 ORF65099 - 5e-09 36.1 8.6 1e-08 35.1 8.6 1.6 1 0 0 1 1 1 1 RING-variant domain Yop-YscD_cpl PF16697.5 ORF65099 - 2.7e-07 30.8 0.0 1.4e-06 28.5 0.1 2.1 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 ORF65099 - 0.58 10.4 5.2 1.4 9.1 5.2 1.7 1 0 0 1 1 1 0 FANCL C-terminal domain zf-CCCH_4 PF18044.1 ORF62930 - 2.3e-05 24.1 0.8 2.3e-05 24.1 0.8 1.7 2 0 0 2 2 2 1 CCCH-type zinc finger zf-CCCH PF00642.24 ORF62930 - 2.4e-05 24.1 1.7 3.8e-05 23.5 1.7 1.3 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF62930 - 0.00017 21.5 5.2 0.0003 20.7 5.2 1.4 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 ORF62930 - 0.0059 17.3 0.1 0.012 16.3 0.1 1.5 1 0 0 1 1 1 1 Torus domain zf-CCCH_2 PF14608.6 ORF62930 - 0.017 15.6 0.5 0.027 14.9 0.5 1.3 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Aminotran_5 PF00266.19 ORF60850 - 9.6e-11 41.2 0.0 1.2e-10 41.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 ORF60850 - 0.013 14.8 0.3 0.02 14.2 0.3 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Glycolytic PF00274.19 ORF58179 - 4.6e-159 528.8 0.0 5.1e-159 528.6 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Thioredoxin PF00085.20 ORF55267 - 1.3e-36 124.7 0.1 7.3e-30 103.0 0.1 3.0 3 0 0 3 3 3 2 Thioredoxin OST3_OST6 PF04756.13 ORF55267 - 1.6e-07 31.0 0.1 5.6e-07 29.2 0.0 1.9 2 1 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_6 PF13848.6 ORF55267 - 3.9e-07 30.2 0.1 0.076 12.9 0.0 3.1 3 0 0 3 3 3 2 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF55267 - 1.3e-06 28.8 0.4 0.089 13.2 0.3 3.9 3 1 0 3 3 3 2 Thioredoxin-like domain Thioredoxin_3 PF13192.6 ORF55267 - 0.0014 18.7 0.0 0.0037 17.3 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_7 PF13899.6 ORF55267 - 0.007 16.5 0.1 0.021 15.0 0.1 1.8 1 0 0 1 1 1 1 Thioredoxin-like TraF PF13728.6 ORF55267 - 0.015 15.1 0.0 0.19 11.5 0.0 2.1 2 0 0 2 2 2 0 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF55267 - 0.049 14.0 0.1 6 7.3 0.1 3.1 2 1 1 3 3 3 0 Thioredoxin-like DUF1685 PF07939.11 ORF55267 - 0.081 12.7 0.3 1 9.2 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1685) Ion_trans PF00520.31 ORF53733 - 7.1e-22 77.8 13.6 1e-21 77.3 13.6 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF53733 - 3.2e-10 39.8 6.3 3.2e-10 39.8 6.3 2.1 2 0 0 2 2 2 1 Ion channel EF-hand_1 PF00036.32 ORF53733 - 4.5e-09 35.2 7.5 0.00051 19.4 0.1 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF53733 - 1.7e-08 33.7 7.2 0.00087 19.0 3.9 2.9 2 1 1 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF53733 - 1.1e-07 31.5 8.6 0.00059 19.6 0.1 3.0 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF53733 - 1.1e-07 32.1 3.6 7.3e-07 29.6 3.6 2.1 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF53733 - 4.5e-06 25.9 4.8 0.067 12.7 1.8 2.9 3 0 0 3 3 3 2 EF hand EF-hand_4 PF12763.7 ORF53733 - 0.16 12.0 3.5 6.4 6.8 0.0 2.8 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand RsgA_GTPase PF03193.16 ORF53528 - 0.0045 16.9 0.0 0.008 16.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase Rad17 PF03215.15 ORF53528 - 0.0098 15.8 0.1 0.025 14.5 0.0 1.6 2 0 0 2 2 2 1 Rad17 P-loop domain Zeta_toxin PF06414.12 ORF53528 - 0.024 13.9 0.0 3 7.1 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 ORF53528 - 0.039 14.1 0.1 0.12 12.6 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF53528 - 0.054 13.0 0.0 0.087 12.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region SRP54 PF00448.22 ORF53528 - 0.068 12.8 0.1 0.59 9.7 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_5 PF07728.14 ORF53528 - 0.072 13.1 0.0 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 ORF53528 - 0.082 12.6 0.5 0.25 11.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 ORF53528 - 0.14 11.3 0.2 3.9 6.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AMP-binding PF00501.28 ORF52940 - 3.2e-68 230.3 0.1 3.8e-68 230.0 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF52940 - 8.5e-06 26.7 0.0 2.3e-05 25.3 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF202 PF02656.15 ORF49240 - 1.6e-10 41.3 1.4 1.6e-10 41.3 1.4 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF202) LysE PF01810.18 ORF49240 - 0.097 12.1 2.8 0.088 12.3 1.1 1.8 2 0 0 2 2 2 0 LysE type translocator DPM3 PF08285.11 ORF49240 - 0.25 11.5 1.3 3.3 8.0 1.3 2.6 1 1 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF1387 PF07139.11 ORF48660 - 1.6 8.4 3.9 1.8 8.2 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1387) GvpH PF05455.11 ORF48660 - 1.8 8.6 5.9 0.64 10.1 0.2 2.2 2 0 0 2 2 2 0 GvpH PHC2_SAM_assoc PF16616.5 ORF48660 - 4.5 8.1 8.9 22 5.9 5.0 2.4 2 0 0 2 2 2 0 Unstructured region on Polyhomeotic-like protein 1 and 2 Glycolytic PF00274.19 ORF43410 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Fez1 PF06818.15 ORF32856 - 0.0002 21.9 23.7 0.13 12.6 0.6 3.6 1 1 3 4 4 4 3 Fez1 DivIC PF04977.15 ORF32856 - 0.014 15.1 27.3 0.13 12.1 1.0 5.9 4 2 2 6 6 6 0 Septum formation initiator DUF4618 PF15397.6 ORF32856 - 0.038 13.4 0.3 0.038 13.4 0.3 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4618) ALS2CR11 PF15729.5 ORF32856 - 0.21 10.7 3.8 0.35 9.9 3.8 1.2 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 candidate 11 DUF641 PF04859.12 ORF32856 - 0.25 11.7 14.6 0.72 10.2 1.2 3.7 3 2 0 3 3 3 0 Plant protein of unknown function (DUF641) Cnn_1N PF07989.11 ORF32856 - 0.81 9.9 21.7 0.64 10.2 0.7 4.5 3 2 1 4 4 4 0 Centrosomin N-terminal motif 1 V_ATPase_I PF01496.19 ORF32856 - 0.95 7.3 11.9 1.5 6.6 5.5 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Sec2p PF06428.11 ORF32856 - 2.2 8.3 19.8 3 7.9 0.5 4.6 4 1 0 5 5 5 0 GDP/GTP exchange factor Sec2p APG6_N PF17675.1 ORF32856 - 4.1 7.9 32.0 2 8.9 5.6 3.9 1 1 2 3 3 3 0 Apg6 coiled-coil region ADH_zinc_N PF00107.26 ORF30266 - 4.8e-11 42.8 0.0 1.6e-10 41.1 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF30266 - 2.1e-05 25.6 0.0 0.00022 22.3 0.0 2.2 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF30266 - 0.00032 20.6 0.2 0.0024 17.8 0.0 2.5 3 1 1 4 4 4 1 Alcohol dehydrogenase GroES-like domain Glycolytic PF00274.19 ORF29002 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I ADH_zinc_N PF00107.26 ORF2161 - 4.8e-11 42.8 0.0 1.6e-10 41.1 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF2161 - 2.1e-05 25.6 0.0 0.00022 22.3 0.0 2.2 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF2161 - 0.00032 20.6 0.2 0.0024 17.8 0.0 2.5 3 1 1 4 4 4 1 Alcohol dehydrogenase GroES-like domain DUF2838 PF10998.8 ORF20667 - 5.3e-26 91.0 5.2 5.3e-26 91.0 5.2 2.6 3 0 0 3 3 3 1 Protein of unknown function (DUF2838) IFT57 PF10498.9 ORF20667 - 0.027 13.5 2.8 0.039 12.9 2.8 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 CdvA PF18822.1 ORF20667 - 0.045 13.6 4.7 0.11 12.3 4.7 1.6 1 1 0 1 1 1 0 CdvA-like coiled-coil domain ApoLp-III PF07464.11 ORF20667 - 0.43 10.7 5.7 0.28 11.3 4.1 1.4 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) WD40 PF00400.32 ORF13071 - 6.7e-22 77.4 4.8 0.00016 22.4 0.1 6.2 5 1 1 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF13071 - 2.9e-20 72.4 0.0 3.9e-05 23.8 0.0 5.5 3 1 3 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF13071 - 2.8e-05 23.6 0.7 6.3 6.0 0.0 4.6 4 1 0 4 4 4 3 WD40-like domain PQQ PF01011.21 ORF13071 - 0.00097 19.0 2.5 0.092 12.7 0.2 4.4 5 0 0 5 5 5 1 PQQ enzyme repeat Ge1_WD40 PF16529.5 ORF13071 - 0.00099 18.2 0.0 6.4 5.6 0.0 3.9 3 1 1 4 4 4 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Cytochrom_D1 PF02239.16 ORF13071 - 0.012 14.1 0.0 0.022 13.3 0.0 1.4 1 0 0 1 1 1 0 Cytochrome D1 heme domain BBS2_Mid PF14783.6 ORF13071 - 0.019 15.0 0.2 5.2 7.1 0.0 4.0 5 0 0 5 5 5 0 Ciliary BBSome complex subunit 2, middle region Nup160 PF11715.8 ORF13071 - 0.21 10.2 0.0 24 3.4 0.0 2.9 3 0 0 3 3 3 0 Nucleoporin Nup120/160 Asp PF00026.23 ORF12578 - 1.9e-36 126.1 3.9 2.4e-36 125.8 3.9 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF12578 - 9.2e-06 26.0 0.4 3.7e-05 24.0 0.1 2.0 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal FAM165 PF14981.6 ORF12578 - 0.2 11.4 0.1 0.37 10.6 0.1 1.4 1 0 0 1 1 1 0 FAM165 family RCC1_2 PF13540.6 ORF12181 - 4.3e-14 51.9 29.8 0.079 12.8 0.1 9.2 9 0 0 9 9 9 6 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF12181 - 2.6e-07 30.9 6.2 3.3 8.1 0.0 7.5 1 1 7 8 8 8 1 TFIIH p62 subunit, N-terminal domain Spectrin PF00435.21 ORF12181 - 9.3e-06 26.1 0.4 40 4.8 0.0 6.2 6 2 2 8 8 8 0 Spectrin repeat zinc_ribbon_13 PF09855.9 ORF12181 - 0.0007 19.7 3.1 55 4.0 0.0 5.8 7 0 0 7 7 7 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) WAK_assoc PF14380.6 ORF12181 - 0.038 14.7 0.1 21 5.9 0.0 4.5 3 2 3 6 6 6 0 Wall-associated receptor kinase C-terminal Methyltransf_29 PF03141.16 ORF12181 - 0.04 12.5 3.9 39 2.6 0.0 4.9 3 1 1 5 5 5 0 Putative S-adenosyl-L-methionine-dependent methyltransferase GST_C_2 PF13410.6 ORF12181 - 0.045 13.8 1.5 39 4.4 0.1 4.1 4 1 0 4 4 4 0 Glutathione S-transferase, C-terminal domain Glyco_tranf_2_3 PF13641.6 ORF12181 - 0.079 12.8 2.2 15 5.4 0.1 3.2 3 1 1 4 4 4 0 Glycosyltransferase like family 2 DUF179 PF02622.15 ORF111810 - 5.2e-19 68.8 0.0 1.1e-18 67.7 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 Antimicrobial12 PF08107.11 ORF111810 - 0.057 13.2 0.0 0.16 11.7 0.0 1.7 1 0 0 1 1 1 0 Pleurocidin family RRM_1 PF00076.22 ORF110627 - 3.4e-16 58.8 0.0 5.4e-16 58.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KH_1 PF00013.29 ORF110627 - 0.0045 16.8 0.1 0.0094 15.8 0.1 1.5 1 0 0 1 1 1 1 KH domain zf-CCCH PF00642.24 ORF110627 - 0.0059 16.5 1.3 0.0098 15.8 1.3 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) BDV_P10 PF06515.11 ORF110627 - 0.14 12.2 2.8 6.3 6.9 0.6 2.4 1 1 1 2 2 2 0 Borna disease virus P10 protein Glycolytic PF00274.19 ORF110177 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Glycolytic PF00274.19 ORF108408 - 1e-158 527.6 0.0 1.1e-158 527.5 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Aa_trans PF01490.18 ORF100515 - 7.8e-49 166.5 23.2 9.5e-49 166.2 23.2 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Epimerase PF01370.21 ORF100443 - 1.4e-22 80.3 0.1 5.4e-22 78.4 0.1 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF100443 - 2.5e-19 69.4 0.0 3.3e-19 68.9 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF100443 - 7.6e-17 61.7 0.0 1.1e-16 61.2 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 ORF100443 - 3.4e-10 39.6 0.0 5.2e-09 35.6 0.0 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF100443 - 6.2e-10 39.3 0.0 1e-09 38.5 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 ORF100443 - 9.6e-10 38.1 0.0 1.4e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 ORF100443 - 8.8e-07 28.3 0.1 1.3e-06 27.7 0.1 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain KR PF08659.10 ORF100443 - 5.6e-06 26.4 0.0 9.4e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 KR domain NmrA PF05368.13 ORF100443 - 0.00054 19.6 0.0 0.0064 16.1 0.0 2.1 2 0 0 2 2 2 1 NmrA-like family adh_short PF00106.25 ORF100443 - 0.01 15.3 0.0 0.017 14.5 0.0 1.5 1 1 0 1 1 1 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF100443 - 0.011 16.0 0.0 0.08 13.2 0.0 2.1 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Glyco_hydro_38N PF01074.22 NODE_17303_length_1064_cov_799.997085_g12620_i2forward_frame_1 - 3e-68 230.3 7.9 4.5e-68 229.7 7.9 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Polysacc_deac_1 PF01522.21 NODE_17303_length_1064_cov_799.997085_g12620_i2forward_frame_1 - 0.00063 19.6 0.3 0.0011 18.9 0.1 1.6 2 0 0 2 2 2 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 NODE_17303_length_1064_cov_799.997085_g12620_i2forward_frame_1 - 0.029 13.6 0.1 0.035 13.3 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 MCM3AP_GANP PF16769.5 NODE_17269_length_1066_cov_5.702231_g13155_i0forward_frame_3 - 0.19 10.0 1.5 0.25 9.5 1.5 1.1 1 0 0 1 1 1 0 MCM3AP domain of GANP ATP-synt_8 PF00895.20 NODE_17206_length_1068_cov_89.878025_g13104_i0reverse_frame_3 - 6.7 7.3 9.4 5 7.7 3.3 3.2 2 0 0 2 2 2 0 ATP synthase protein 8 Kinesin PF00225.23 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 1e-54 185.7 3.0 1e-54 185.7 3.0 1.6 2 0 0 2 2 2 1 Kinesin motor domain MatP_C PF17414.2 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 2.4 8.4 7.1 22 5.3 0.8 3.1 2 0 0 2 2 2 0 MatP C-terminal ribbon-helix-helix domain CK1gamma_C PF12605.8 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 4.5 8.5 7.8 0.28 12.4 0.6 2.4 1 1 0 2 2 2 0 Casein kinase 1 gamma C terminal DUF5320 PF17253.2 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 5.4 8.2 5.6 2.2 9.4 2.6 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5320) G-gamma PF00631.22 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 6.3 6.9 6.4 4.6 7.3 3.0 2.5 2 1 1 3 3 3 0 GGL domain TIR_3 PF18567.1 ORF9822 - 0.021 14.8 0.6 0.052 13.5 0.1 1.8 2 0 0 2 2 2 0 Toll/interleukin-1 receptor domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks36.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks36.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks36.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks36.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NTS PF15447.6 NODE_77787_length_203_cov_1.261905_g69846_i0forward_frame_3 - 1.2 9.7 3.2 19 5.9 0.1 2.4 2 1 0 2 2 2 0 N-terminal segments of PfEMP1 Trypan_PARP PF05887.11 NODE_77787_length_203_cov_1.261905_g69846_i0forward_frame_2 - 0.18 11.8 5.1 0.21 11.6 5.1 1.0 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Glycoprotein_G PF00802.19 NODE_77787_length_203_cov_1.261905_g69846_i0forward_frame_2 - 1.2 8.4 4.1 1.3 8.3 4.1 1.0 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G GGDEF PF00990.21 NODE_77777_length_203_cov_1.357143_g69836_i0forward_frame_2 - 4.4e-21 75.3 0.1 4.5e-21 75.3 0.1 1.0 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain DUF4260 PF14079.6 NODE_77776_length_203_cov_1.369048_g69835_i0forward_frame_3 - 0.13 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4260) Toxin_16 PF07945.11 NODE_77772_length_203_cov_1.392857_g69831_i0reverse_frame_2 - 0.029 14.2 2.0 0.38 10.7 0.8 2.2 2 0 0 2 2 2 0 Janus-atracotoxin REV PF00424.18 NODE_77763_length_203_cov_1.416667_g69822_i0forward_frame_2 - 0.045 13.8 1.1 0.053 13.6 1.1 1.1 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) DUF2752 PF10825.8 NODE_77761_length_203_cov_1.422619_g69820_i0reverse_frame_3 - 0.0077 16.3 0.3 0.012 15.7 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2752) DUF4763 PF15960.5 NODE_77757_length_203_cov_1.422619_g69816_i0reverse_frame_3 - 0.081 12.2 1.2 0.088 12.1 1.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) DUF2744 PF10910.8 NODE_77756_length_203_cov_1.428571_g69815_i0forward_frame_3 - 0.14 12.1 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2744) E1-E2_ATPase PF00122.20 NODE_77755_length_203_cov_1.428571_g69814_i0reverse_frame_3 - 0.00022 20.8 0.0 0.00024 20.7 0.0 1.0 1 0 0 1 1 1 1 E1-E2 ATPase DUF4050 PF13259.6 NODE_77754_length_203_cov_1.428571_g69813_i0reverse_frame_3 - 0.06 13.7 0.5 0.065 13.6 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) MRP_L53 PF10780.9 NODE_77752_length_203_cov_1.428571_g69811_i0forward_frame_2 - 0.13 12.5 1.1 13 6.0 0.1 2.3 2 0 0 2 2 2 0 39S ribosomal protein L53/MRP-L53 TRIC PF05197.13 NODE_77750_length_203_cov_1.428571_g69809_i0reverse_frame_2 - 0.013 15.1 1.6 0.013 15.1 1.6 1.1 1 0 0 1 1 1 0 TRIC channel hnRNP_Q_AcD PF18360.1 NODE_77749_length_203_cov_1.428571_g69808_i0forward_frame_2 - 0.0029 17.5 0.1 0.0046 16.9 0.1 1.3 1 0 0 1 1 1 1 Heterogeneous nuclear ribonucleoprotein Q acidic domain Aldedh PF00171.22 NODE_77740_length_203_cov_1.428571_g69799_i0forward_frame_2 - 4.4e-25 88.1 0.5 4.6e-25 88.1 0.5 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DGF-1_4 PF11024.8 NODE_77737_length_203_cov_1.440476_g69796_i0forward_frame_2 - 0.011 16.6 0.1 0.015 16.1 0.1 1.3 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 4 B277 PF17623.2 NODE_77735_length_203_cov_1.458333_g69794_i0reverse_frame_3 - 0.11 11.6 0.6 0.11 11.5 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function LIN37 PF15306.6 NODE_77735_length_203_cov_1.458333_g69794_i0forward_frame_2 - 0.016 15.5 0.1 0.018 15.3 0.1 1.0 1 0 0 1 1 1 0 LIN37 DUF883 PF05957.13 NODE_77733_length_203_cov_1.494048_g69792_i0forward_frame_3 - 0.13 12.9 0.1 0.13 12.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CDI PF02234.19 NODE_77733_length_203_cov_1.494048_g69792_i0forward_frame_3 - 0.13 12.5 0.3 0.45 10.7 0.3 1.8 1 1 0 1 1 1 0 Cyclin-dependent kinase inhibitor DUF999 PF06198.11 NODE_77733_length_203_cov_1.494048_g69792_i0forward_frame_2 - 0.027 14.4 0.3 0.03 14.3 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF999) Folliculin PF11704.8 NODE_77731_length_203_cov_1.500000_g69790_i0reverse_frame_2 - 0.084 12.8 0.0 0.086 12.7 0.0 1.0 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport NLE PF08154.12 NODE_77728_length_203_cov_1.511905_g69787_i0reverse_frame_3 - 0.056 14.0 0.1 0.19 12.2 0.1 1.8 1 1 0 1 1 1 0 NLE (NUC135) domain SDP_N PF12278.8 NODE_77724_length_203_cov_1.523810_g69783_i0reverse_frame_3 - 0.041 14.0 0.5 0.045 13.9 0.5 1.1 1 0 0 1 1 1 0 Sex determination protein N terminal GBP_repeat PF02526.14 NODE_77722_length_203_cov_1.541667_g69781_i0forward_frame_3 - 0.036 13.8 0.0 0.05 13.3 0.0 1.2 1 0 0 1 1 1 0 Glycophorin-binding protein HAP1_N PF04849.13 NODE_77721_length_203_cov_1.547619_g69780_i0reverse_frame_3 - 0.02 14.1 5.3 0.021 14.0 5.3 1.1 1 0 0 1 1 1 0 HAP1 N-terminal conserved region Mto2_bdg PF12808.7 NODE_77721_length_203_cov_1.547619_g69780_i0reverse_frame_3 - 0.035 14.4 2.6 0.035 14.4 2.6 1.9 2 0 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region UPF0242 PF06785.11 NODE_77721_length_203_cov_1.547619_g69780_i0reverse_frame_3 - 0.093 12.8 4.8 0.11 12.6 4.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ABC2_membrane_3 PF12698.7 NODE_77720_length_203_cov_1.547619_g69779_i0reverse_frame_3 - 0.0015 17.7 8.5 0.0015 17.7 8.5 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein DUF4196 PF13846.6 NODE_77720_length_203_cov_1.547619_g69779_i0forward_frame_3 - 0.017 15.3 0.1 0.018 15.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4196) Pox_P21 PF05313.12 NODE_77718_length_203_cov_1.553571_g69777_i0reverse_frame_3 - 0.015 14.9 0.0 0.016 14.8 0.0 1.0 1 0 0 1 1 1 0 Poxvirus P21 membrane protein Pyridoxal_deC PF00282.19 NODE_77718_length_203_cov_1.553571_g69777_i0reverse_frame_3 - 0.12 11.1 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain FANCI_HD1 PF14679.6 NODE_77715_length_203_cov_1.577381_g69774_i0forward_frame_2 - 0.039 13.9 0.2 0.074 13.0 0.2 1.4 1 0 0 1 1 1 0 FANCI helical domain 1 UPF0254 PF06787.11 NODE_77712_length_203_cov_1.595238_g69771_i0forward_frame_3 - 0.11 12.3 0.1 0.11 12.2 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) Caa3_CtaG PF09678.10 NODE_77710_length_203_cov_1.613095_g69769_i0reverse_frame_2 - 0.016 14.6 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CagD PF16567.5 NODE_77708_length_203_cov_1.619048_g69767_i0forward_frame_3 - 0.0095 15.7 1.0 0.01 15.7 1.0 1.0 1 0 0 1 1 1 1 Pathogenicity island component CagD Oleosin PF01277.17 NODE_77703_length_203_cov_1.654762_g69762_i0forward_frame_2 - 0.0042 16.8 0.0 0.0046 16.7 0.0 1.0 1 0 0 1 1 1 1 Oleosin Hist_deacetyl PF00850.19 NODE_77700_length_203_cov_1.666667_g69759_i0reverse_frame_3 - 0.0001 21.9 0.0 0.00011 21.7 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain SseC PF04888.12 NODE_77698_length_203_cov_1.666667_g69757_i0reverse_frame_2 - 0.056 13.0 1.2 0.065 12.8 1.2 1.0 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family ODAM PF15424.6 NODE_77696_length_203_cov_1.666667_g69755_i0forward_frame_2 - 0.021 14.4 0.1 0.024 14.2 0.1 1.0 1 0 0 1 1 1 0 Odontogenic ameloblast-associated family Rox3 PF08633.10 NODE_77684_length_203_cov_1.761905_g69743_i0forward_frame_3 - 0.11 12.8 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Rox3 mediator complex subunit IRK_N PF08466.10 NODE_77683_length_203_cov_1.773810_g69742_i0reverse_frame_3 - 0.14 12.3 0.2 0.26 11.5 0.2 1.4 1 0 0 1 1 1 0 Inward rectifier potassium channel N-terminal DUF5483 PF17581.2 NODE_77682_length_203_cov_1.779762_g69741_i0reverse_frame_2 - 0.011 14.6 0.1 0.012 14.5 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5483) Glycos_transf_2 PF00535.26 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 8.7e-15 54.9 0.4 8.7e-15 54.9 0.4 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 0.00033 20.2 0.3 0.00033 20.2 0.3 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 0.00084 19.3 0.0 0.00085 19.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 DUF373 PF04123.13 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 0.022 14.2 0.6 0.026 14.0 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) Glyco_tranf_2_4 PF13704.6 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 0.039 14.5 0.0 0.042 14.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF3587 PF12132.8 NODE_77680_length_203_cov_1.785714_g69739_i0reverse_frame_2 - 0.029 13.8 0.6 0.03 13.8 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3587) TT_ORF1 PF02956.14 NODE_77678_length_203_cov_1.791667_g69737_i0forward_frame_3 - 4.7 5.8 4.7 4.8 5.7 4.7 1.0 1 0 0 1 1 1 0 TT viral orf 1 Gate PF07670.14 NODE_77677_length_203_cov_1.791667_g69736_i0reverse_frame_2 - 0.013 15.8 0.1 0.015 15.5 0.1 1.0 1 0 0 1 1 1 0 Nucleoside recognition Humanin PF15040.6 NODE_77673_length_203_cov_1.809524_g69732_i0reverse_frame_2 - 0.035 13.5 0.7 0.1 12.0 0.7 1.8 1 0 0 1 1 1 0 Humanin family Dicty_CTDC PF00526.18 NODE_77670_length_203_cov_1.815476_g69729_i0forward_frame_3 - 0.12 12.3 4.6 0.31 11.0 4.6 1.8 1 1 0 1 1 1 0 Dictyostelium (slime mold) repeat UPF0515 PF15135.6 NODE_77666_length_203_cov_1.851190_g69725_i0forward_frame_3 - 0.015 14.7 0.0 0.015 14.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 Zn_ribbon_SprT PF17283.2 NODE_77666_length_203_cov_1.851190_g69725_i0forward_frame_3 - 0.025 14.5 0.8 0.032 14.1 0.8 1.2 1 0 0 1 1 1 0 SprT-like zinc ribbon domain PAP1 PF08601.10 NODE_77662_length_203_cov_1.892857_g69721_i0reverse_frame_3 - 0.43 10.2 2.2 0.44 10.2 2.2 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 RCC1 PF00415.18 NODE_77660_length_203_cov_1.898810_g69719_i0reverse_frame_3 - 3.1e-15 56.5 0.4 5.9e-11 42.8 0.0 2.0 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_77660_length_203_cov_1.898810_g69719_i0reverse_frame_3 - 3.4e-10 39.4 0.3 2.7e-08 33.4 0.2 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF2735 PF10931.8 NODE_77660_length_203_cov_1.898810_g69719_i0reverse_frame_3 - 0.051 14.3 0.1 0.066 13.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2735) ATP-synt_Z PF16594.5 NODE_77660_length_203_cov_1.898810_g69719_i0reverse_frame_2 - 0.18 11.3 0.1 0.23 11.0 0.1 1.2 1 0 0 1 1 1 0 Putative AtpZ or ATP-synthase-associated DUF4337 PF14235.6 NODE_77659_length_203_cov_1.898810_g69718_i0reverse_frame_3 - 0.13 12.4 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Cytochrom_B559 PF00283.19 NODE_77649_length_203_cov_1.988095_g69708_i0reverse_frame_3 - 0.05 13.1 4.1 0.077 12.4 4.1 1.3 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Cnd1_N PF12922.7 NODE_77648_length_203_cov_1.994048_g69707_i0forward_frame_2 - 0.087 12.7 0.1 0.098 12.5 0.1 1.1 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term Kinesin PF00225.23 NODE_77647_length_203_cov_2.005952_g69706_i0forward_frame_3 - 4.2e-24 85.1 0.0 4.5e-24 85.0 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain TRIQK PF15168.6 NODE_77641_length_203_cov_2.059524_g69700_i0forward_frame_3 - 0.69 9.8 3.7 0.86 9.5 3.7 1.3 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family TMEM154 PF15102.6 NODE_77641_length_203_cov_2.059524_g69700_i0forward_frame_3 - 0.97 9.3 2.7 1.1 9.2 2.7 1.1 1 0 0 1 1 1 0 TMEM154 protein family Microcin PF03526.13 NODE_77638_length_203_cov_2.071429_g69697_i0reverse_frame_3 - 0.026 14.3 2.6 0.026 14.3 2.6 1.6 1 1 1 2 2 2 0 Colicin E1 (microcin) immunity protein RVT_1 PF00078.27 NODE_77636_length_203_cov_2.077381_g69695_i0forward_frame_2 - 0.0097 15.4 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DivIC PF04977.15 NODE_77635_length_203_cov_2.101190_g69694_i0reverse_frame_3 - 0.083 12.7 0.7 0.1 12.4 0.7 1.1 1 0 0 1 1 1 0 Septum formation initiator CBM_14 PF01607.24 NODE_77633_length_203_cov_2.142857_g69692_i0reverse_frame_3 - 0.11 12.7 0.4 0.15 12.2 0.4 1.3 1 1 0 1 1 1 0 Chitin binding Peritrophin-A domain V_ATPase_prox PF18274.1 NODE_77626_length_203_cov_2.208333_g69685_i0forward_frame_3 - 0.029 14.3 0.2 0.045 13.7 0.2 1.3 1 0 0 1 1 1 0 Vacuolar ATPase Subunit I N-terminal proximal lobe Comm PF15957.5 NODE_77620_length_203_cov_2.315476_g69679_i0reverse_frame_2 - 0.022 15.1 2.4 0.022 15.1 2.4 1.1 1 0 0 1 1 1 0 Commissureless DUF3290 PF11694.8 NODE_77614_length_203_cov_2.434524_g69673_i0forward_frame_2 - 0.024 14.6 0.6 0.027 14.4 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) zf-C2H2 PF00096.26 NODE_77614_length_203_cov_2.434524_g69673_i0forward_frame_2 - 0.047 14.2 0.2 0.089 13.3 0.2 1.5 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf_UBZ PF18439.1 NODE_77614_length_203_cov_2.434524_g69673_i0forward_frame_2 - 0.069 12.8 0.2 0.094 12.3 0.2 1.2 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger RVT_1 PF00078.27 NODE_77612_length_203_cov_2.440476_g69671_i0reverse_frame_2 - 7.8e-05 22.3 0.0 7.9e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF2499 PF10693.9 NODE_77612_length_203_cov_2.440476_g69671_i0reverse_frame_2 - 0.076 13.3 0.0 0.089 13.1 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2499) zf-C4 PF00105.18 NODE_77605_length_203_cov_2.500000_g69664_i0forward_frame_3 - 0.0066 16.9 1.2 0.0075 16.7 1.2 1.2 1 0 0 1 1 1 1 Zinc finger, C4 type (two domains) UBA2_C PF16195.5 NODE_77603_length_203_cov_2.529762_g69662_i0reverse_frame_2 - 0.066 13.9 0.2 0.076 13.7 0.2 1.1 1 0 0 1 1 1 0 SUMO-activating enzyme subunit 2 C-terminus Aldo_ket_red PF00248.21 NODE_77599_length_203_cov_2.571429_g69658_i0forward_frame_2 - 3.4e-07 29.8 0.0 3.4e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family QLQ PF08880.11 NODE_77599_length_203_cov_2.571429_g69658_i0forward_frame_2 - 0.35 10.6 6.2 3.5 7.5 0.5 3.1 3 0 0 3 3 3 0 QLQ EAR PF07897.11 NODE_77595_length_203_cov_2.642857_g69654_i0forward_frame_2 - 0.046 13.3 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Ethylene-responsive binding factor-associated repression Flagellar_put PF12611.8 NODE_77593_length_203_cov_2.732143_g69652_i0forward_frame_2 - 0.1 12.4 2.7 0.19 11.5 2.7 1.5 1 0 0 1 1 1 0 Putative flagellar FlxA PF14282.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.0011 19.0 1.3 0.0013 18.7 1.3 1.1 1 0 0 1 1 1 1 FlxA-like protein Snapin_Pallidin PF14712.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.018 15.5 0.1 0.023 15.1 0.1 1.2 1 0 0 1 1 1 0 Snapin/Pallidin DUF4200 PF13863.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.028 14.8 0.3 0.029 14.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) GTP-bdg_M PF16360.5 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.029 14.9 0.7 0.038 14.6 0.7 1.2 1 0 0 1 1 1 0 GTP-binding GTPase Middle Region DUF4298 PF14131.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.03 14.3 0.2 0.036 14.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Utp21 PF04192.12 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.045 13.2 0.3 0.054 13.0 0.3 1.0 1 0 0 1 1 1 0 Utp21 specific WD40 associated putative domain DUF5320 PF17253.2 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.046 14.8 0.4 0.054 14.6 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5320) DUF4419 PF14388.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.048 13.1 0.1 0.06 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4419) APG6_N PF17675.1 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.071 13.6 1.1 0.076 13.5 1.1 1.0 1 0 0 1 1 1 0 Apg6 coiled-coil region Qua1 PF16274.5 NODE_77587_length_203_cov_2.851190_g69646_i0forward_frame_3 - 0.017 15.0 0.0 0.023 14.5 0.0 1.2 1 0 0 1 1 1 0 Qua1 domain Aminotran_3 PF00202.21 NODE_77586_length_203_cov_2.857143_g69645_i0forward_frame_3 - 0.016 13.9 0.0 0.016 13.9 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-III Colicin_Pyocin PF01320.18 NODE_77586_length_203_cov_2.857143_g69645_i0forward_frame_3 - 0.12 12.5 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein Abhydrolase_1 PF00561.20 NODE_77584_length_203_cov_2.940476_g69643_i0forward_frame_2 - 7.4e-07 29.1 0.1 8.6e-07 28.9 0.1 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_77584_length_203_cov_2.940476_g69643_i0forward_frame_2 - 6.1e-06 25.7 0.0 7e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 NODE_77584_length_203_cov_2.940476_g69643_i0forward_frame_2 - 0.0001 23.0 0.5 0.00013 22.7 0.5 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family EHN PF06441.12 NODE_77584_length_203_cov_2.940476_g69643_i0forward_frame_2 - 0.00022 21.5 0.1 0.00029 21.2 0.1 1.2 1 0 0 1 1 1 1 Epoxide hydrolase N terminus DUF3866 PF12982.7 NODE_77580_length_203_cov_2.988095_g69639_i0reverse_frame_2 - 0.014 14.5 0.4 0.014 14.5 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3866) TTL PF03133.15 NODE_77579_length_203_cov_3.029762_g69638_i0reverse_frame_2 - 5e-12 45.6 0.0 5e-12 45.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_77579_length_203_cov_3.029762_g69638_i0reverse_frame_2 - 0.008 15.5 0.0 0.008 15.5 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp DrrA_P4M PF14860.6 NODE_77578_length_203_cov_3.083333_g69637_i0reverse_frame_3 - 0.018 14.9 0.6 0.019 14.8 0.6 1.1 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain UPF0524 PF15823.5 NODE_77575_length_203_cov_3.273810_g69634_i0reverse_frame_3 - 0.085 12.2 1.2 0.097 12.1 1.2 1.2 1 0 0 1 1 1 0 UPF0524 of C3orf70 TatD_DNase PF01026.21 NODE_77574_length_203_cov_3.327381_g69633_i0forward_frame_3 - 0.039 13.3 0.6 0.47 9.8 0.6 2.0 1 1 0 1 1 1 0 TatD related DNase Innexin PF00876.18 NODE_77572_length_203_cov_3.392857_g69631_i0forward_frame_2 - 0.0092 15.3 1.5 0.0094 15.3 1.5 1.0 1 0 0 1 1 1 1 Innexin EcoRII-N PF09217.10 NODE_77559_length_203_cov_21.821429_g69618_i0reverse_frame_2 - 0.031 14.0 0.3 0.032 14.0 0.3 1.0 1 0 0 1 1 1 0 Restriction endonuclease EcoRII, N-terminal SLY PF12485.8 NODE_77558_length_203_cov_21.916667_g69617_i0reverse_frame_2 - 0.031 15.0 4.7 0.042 14.6 4.7 1.2 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein DUF3953 PF13129.6 NODE_77558_length_203_cov_21.916667_g69617_i0reverse_frame_2 - 0.54 10.0 0.0 0.54 10.0 0.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3953) Leader_Thr PF08254.11 NODE_77557_length_203_cov_22.035714_g69616_i0reverse_frame_3 - 0.22 11.3 1.6 0.37 10.6 1.6 1.3 1 0 0 1 1 1 0 Threonine leader peptide DUF412 PF04217.13 NODE_77556_length_203_cov_22.738095_g69615_i0forward_frame_3 - 0.041 13.8 0.0 0.046 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF412 zf-MYND PF01753.18 NODE_77555_length_203_cov_22.839286_g69614_i0reverse_frame_2 - 0.00026 21.0 17.3 0.00038 20.5 17.3 1.3 1 0 0 1 1 1 1 MYND finger VirB3 PF05101.13 NODE_77555_length_203_cov_22.839286_g69614_i0forward_frame_2 - 0.12 12.7 4.2 0.14 12.4 4.2 1.1 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein ATP_synt_H PF05493.13 NODE_77555_length_203_cov_22.839286_g69614_i0forward_frame_2 - 5.2 7.6 7.8 1.8e+02 2.7 7.9 2.0 1 1 0 1 1 1 0 ATP synthase subunit H EMC3_TMCO1 PF01956.16 NODE_77552_length_203_cov_26.589286_g69611_i0reverse_frame_3 - 2.8 7.6 5.4 2.9 7.6 5.4 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF2721 PF11026.8 NODE_77552_length_203_cov_26.589286_g69611_i0reverse_frame_2 - 0.34 10.8 1.1 0.39 10.6 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) DUF3969 PF13108.6 NODE_77547_length_203_cov_30.690476_g69606_i0reverse_frame_3 - 0.048 13.7 0.2 0.056 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3969) QueF_N PF14819.6 NODE_77544_length_203_cov_33.833333_g69603_i0reverse_frame_2 - 0.03 14.6 0.1 0.032 14.5 0.1 1.2 1 0 0 1 1 1 0 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term gpUL132 PF11359.8 NODE_77544_length_203_cov_33.833333_g69603_i0forward_frame_3 - 0.63 9.5 2.6 0.7 9.4 2.6 1.0 1 0 0 1 1 1 0 Glycoprotein UL132 YscO-like PF16789.5 NODE_77540_length_203_cov_35.505952_g69599_i0reverse_frame_3 - 0.021 14.9 0.1 0.023 14.7 0.1 1.0 1 0 0 1 1 1 0 YscO-like protein IZUMO PF15005.6 NODE_77540_length_203_cov_35.505952_g69599_i0reverse_frame_3 - 0.033 14.7 0.2 0.034 14.7 0.2 1.0 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DUF4813 PF16072.5 NODE_77537_length_203_cov_36.636905_g69596_i0reverse_frame_2 - 0.029 14.1 11.2 0.033 13.9 11.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4813) Collagen PF01391.18 NODE_77533_length_203_cov_38.982143_g69592_i0reverse_frame_3 - 0.15 11.8 17.6 0.5 10.2 17.6 1.8 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) Sa_NUDIX PF18167.1 NODE_77531_length_203_cov_40.726190_g69590_i0forward_frame_2 - 0.05 13.4 0.0 0.064 13.0 0.0 1.1 1 0 0 1 1 1 0 SMODS-associated NUDIX domain DUF3128 PF11326.8 NODE_77529_length_203_cov_44.434524_g69588_i0reverse_frame_3 - 1.7 9.0 7.4 0.95 9.9 3.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3128) Far-17a_AIG1 PF04750.14 NODE_77523_length_203_cov_51.130952_g69582_i0forward_frame_3 - 0.022 14.1 0.7 0.023 14.0 0.7 1.0 1 0 0 1 1 1 0 FAR-17a/AIG1-like protein HCV_core PF01542.18 NODE_77523_length_203_cov_51.130952_g69582_i0forward_frame_3 - 0.11 12.9 1.0 0.15 12.5 1.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus core protein DUF2208 PF09973.9 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.045 13.4 0.3 0.055 13.1 0.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) FixH PF05751.11 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.056 13.5 0.1 0.063 13.3 0.1 1.0 1 0 0 1 1 1 0 FixH DUF3301 PF11743.8 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.064 12.9 0.0 0.075 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) Ctr PF04145.15 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.1 13.2 0.4 0.1 13.2 0.4 1.0 1 0 0 1 1 1 0 Ctr copper transporter family HemY_N PF07219.13 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.13 12.5 1.3 0.15 12.3 1.3 1.1 1 0 0 1 1 1 0 HemY protein N-terminus C2 PF00168.30 NODE_77519_length_203_cov_57.065476_g69578_i0forward_frame_2 - 0.0016 18.7 0.0 0.0017 18.6 0.0 1.2 1 0 0 1 1 1 1 C2 domain Pox_VERT_large PF04441.13 NODE_77517_length_203_cov_60.702381_g69576_i0forward_frame_3 - 0.48 8.6 2.5 0.52 8.5 2.5 1.1 1 0 0 1 1 1 0 Poxvirus early transcription factor (VETF), large subunit Pox_TAP PF03355.14 NODE_77516_length_203_cov_61.541667_g69575_i0reverse_frame_3 - 0.02 14.5 0.5 0.023 14.3 0.5 1.1 1 0 0 1 1 1 0 Viral Trans-Activator Protein Glyco_tran_28_C PF04101.16 NODE_77513_length_203_cov_68.589286_g69572_i0forward_frame_3 - 0.012 15.6 0.0 0.012 15.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 28 C-terminal domain ETRAMP PF09716.10 NODE_77512_length_203_cov_71.416667_g69571_i0reverse_frame_3 - 0.01 15.8 6.1 0.012 15.6 6.1 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) RSN1_7TM PF02714.15 NODE_77512_length_203_cov_71.416667_g69571_i0forward_frame_2 - 0.026 13.8 3.6 0.03 13.6 3.6 1.1 1 0 0 1 1 1 0 Calcium-dependent channel, 7TM region, putative phosphate PLN_propep PF16485.5 NODE_77509_length_203_cov_78.279762_g69568_i0reverse_frame_3 - 0.19 11.5 1.2 0.33 10.7 1.2 1.6 1 1 0 1 1 1 0 Protealysin propeptide CTNNB1_binding PF08347.11 NODE_77509_length_203_cov_78.279762_g69568_i0reverse_frame_2 - 0.18 12.0 0.2 0.2 11.8 0.2 1.0 1 0 0 1 1 1 0 N-terminal CTNNB1 binding AlaDh_PNT_N PF05222.15 NODE_77503_length_203_cov_98.321429_g69562_i0reverse_frame_2 - 4.2e-09 36.8 0.0 5.2e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, N-terminal domain DUF835 PF05763.12 NODE_77503_length_203_cov_98.321429_g69562_i0reverse_frame_2 - 0.077 12.7 0.1 0.083 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF835) TrmO_C PF18389.1 NODE_77498_length_203_cov_122.011905_g69557_i0reverse_frame_3 - 0.032 14.3 0.0 0.039 14.1 0.0 1.1 1 0 0 1 1 1 0 TrmO C-terminal domain DUF5345 PF17280.2 NODE_77498_length_203_cov_122.011905_g69557_i0forward_frame_3 - 3.1 7.8 5.3 17 5.5 0.1 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5345) DUF1467 PF07330.12 NODE_77498_length_203_cov_122.011905_g69557_i0forward_frame_2 - 0.087 12.8 0.0 0.099 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1467) CD34_antigen PF06365.12 NODE_77493_length_203_cov_210.148810_g69552_i0reverse_frame_2 - 0.0089 15.6 0.2 0.0094 15.6 0.2 1.1 1 0 0 1 1 1 1 CD34/Podocalyxin family Orf78 PF06024.12 NODE_77493_length_203_cov_210.148810_g69552_i0reverse_frame_2 - 0.011 16.0 0.1 0.013 15.8 0.1 1.0 1 0 0 1 1 1 0 Orf78 (ac78) TMEM154 PF15102.6 NODE_77493_length_203_cov_210.148810_g69552_i0reverse_frame_2 - 0.02 14.8 0.2 0.021 14.7 0.2 1.0 1 0 0 1 1 1 0 TMEM154 protein family TMEM132D_C PF15706.5 NODE_77493_length_203_cov_210.148810_g69552_i0reverse_frame_2 - 0.17 11.7 1.2 0.24 11.2 1.2 1.5 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF1416 PF07210.12 NODE_77487_length_203_cov_484.678571_g69546_i0reverse_frame_2 - 0.25 11.2 0.0 0.29 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1416) DUF3272 PF11676.8 NODE_77483_length_204_cov_0.905325_g69542_i0forward_frame_3 - 0.029 14.6 0.0 0.039 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3272) DrsE_2 PF13686.6 NODE_77483_length_204_cov_0.905325_g69542_i0forward_frame_3 - 0.082 12.8 0.0 0.082 12.8 0.0 1.1 1 0 0 1 1 1 0 DsrE/DsrF/DrsH-like family DUF5511 PF17630.2 NODE_77482_length_204_cov_0.917160_g69541_i0forward_frame_3 - 0.066 13.4 0.6 0.088 13.0 0.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5511) SOCS PF12610.8 NODE_77478_length_204_cov_0.940828_g69537_i0forward_frame_2 - 0.078 13.4 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 Suppressor of cytokine signalling Herpes_LAMP2 PF06126.11 NODE_77476_length_204_cov_0.940828_g69535_i0forward_frame_3 - 2.5 6.6 9.4 2.8 6.5 9.4 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 BLI1 PF17324.2 NODE_77473_length_204_cov_0.940828_g69532_i0forward_frame_2 - 0.019 15.6 2.6 0.024 15.3 2.6 1.1 1 0 0 1 1 1 0 BLOC-1 interactor 1 tRNA-synt_1c PF00749.21 NODE_77470_length_204_cov_0.946746_g69529_i0forward_frame_3 - 6.2e-18 64.8 0.0 6.4e-18 64.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain DAP10 PF07213.11 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.00099 19.0 0.7 0.0011 18.8 0.7 1.1 1 0 0 1 1 1 1 DAP10 membrane protein TM231 PF10149.9 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.025 13.9 0.3 0.027 13.8 0.3 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 Rax2 PF12768.7 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.031 13.7 0.5 0.031 13.7 0.5 1.0 1 0 0 1 1 1 0 Cortical protein marker for cell polarity TPPK_C PF12555.8 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.046 13.8 9.3 0.046 13.8 9.3 1.5 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal Protocadherin PF08374.11 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.064 13.2 0.7 0.065 13.2 0.7 1.0 1 0 0 1 1 1 0 Protocadherin FeoB_associated PF12669.7 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 1 9.8 10.8 1.7 9.1 0.0 2.8 1 1 1 2 2 2 0 FeoB-associated Cys-rich membrane protein DUF3357 PF11837.8 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 3 8.4 5.8 2.7 8.5 4.7 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF3357) IMUP PF15761.5 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_2 - 2.3 8.9 10.4 2.6 8.8 10.4 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein KcnmB2_inactiv PF09303.10 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_2 - 2.4 8.0 4.7 4.8 7.1 4.7 1.6 1 0 0 1 1 1 0 KCNMB2, ball and chain domain SSP160 PF06933.11 NODE_77468_length_204_cov_0.946746_g69527_i0forward_frame_3 - 9 4.4 9.7 9.5 4.3 9.7 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DCB PF16213.5 NODE_77468_length_204_cov_0.946746_g69527_i0forward_frame_2 - 0.35 10.5 1.3 0.43 10.2 1.3 1.0 1 0 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 Transp_inhibit PF18791.1 NODE_77466_length_204_cov_0.946746_g69525_i0forward_frame_2 - 0.2 11.2 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 Transport inhibitor response 1 protein domain BRD4_CDT PF17105.5 NODE_77456_length_204_cov_0.946746_g69515_i0forward_frame_3 - 0.069 12.8 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 C-terminal domain of bromodomain protein 4 Deltameth_res PF16020.5 NODE_77451_length_204_cov_0.946746_g69510_i0forward_frame_3 - 0.029 14.2 0.1 0.041 13.8 0.1 1.2 1 0 0 1 1 1 0 Deltamethrin resistance LCIB_C_CA PF18599.1 NODE_77450_length_204_cov_0.946746_g69509_i0forward_frame_2 - 0.2 10.9 0.0 0.21 10.9 0.0 1.0 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases Renin_r PF07850.14 NODE_77447_length_204_cov_0.958580_g69506_i0reverse_frame_2 - 0.014 16.0 0.6 0.014 15.9 0.6 1.1 1 0 0 1 1 1 0 Renin receptor-like protein Orai-1 PF07856.12 NODE_77447_length_204_cov_0.958580_g69506_i0forward_frame_3 - 0.028 14.1 0.1 0.028 14.1 0.1 1.1 1 0 0 1 1 1 0 Mediator of CRAC channel activity GP4 PF03010.14 NODE_77445_length_204_cov_0.988166_g69504_i0reverse_frame_3 - 0.13 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 GP4 FxsA PF04186.13 NODE_77444_length_204_cov_0.988166_g69503_i0forward_frame_3 - 0.013 15.6 0.0 0.014 15.5 0.0 1.1 1 0 0 1 1 1 0 FxsA cytoplasmic membrane protein DUF3373 PF11853.8 NODE_77434_length_204_cov_1.065089_g69493_i0forward_frame_3 - 0.12 11.4 0.6 0.14 11.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3373) Alba PF01918.21 NODE_77433_length_204_cov_1.071006_g69492_i0forward_frame_2 - 0.069 13.0 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 Alba DUF2207 PF09972.9 NODE_77432_length_204_cov_1.112426_g69491_i0forward_frame_2 - 0.062 12.1 0.2 0.07 11.9 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) EGF_3 PF12947.7 NODE_77431_length_204_cov_1.112426_g69490_i0reverse_frame_2 - 0.28 11.4 8.2 0.46 10.7 8.2 1.5 1 1 0 1 1 1 0 EGF domain cEGF PF12662.7 NODE_77426_length_204_cov_1.147929_g69485_i0forward_frame_3 - 0.0045 16.9 0.1 0.0092 15.9 0.1 1.5 1 0 0 1 1 1 1 Complement Clr-like EGF-like FXa_inhibition PF14670.6 NODE_77426_length_204_cov_1.147929_g69485_i0forward_frame_3 - 0.11 12.9 1.2 0.16 12.3 1.2 1.3 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site VF530 PF09905.9 NODE_77425_length_204_cov_1.159763_g69484_i0reverse_frame_3 - 0.073 13.3 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 FIIND PF13553.6 NODE_77424_length_204_cov_1.159763_g69483_i0reverse_frame_2 - 0.064 12.7 0.1 0.065 12.6 0.1 1.0 1 0 0 1 1 1 0 Function to find # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks370.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks370.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks370.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks370.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Piezo_RRas_bdg PF12166.8 NODE_77418_length_204_cov_1.183432_g69477_i0reverse_frame_2 - 0.086 12.1 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain Mur_ligase PF01225.25 NODE_77418_length_204_cov_1.183432_g69477_i0forward_frame_3 - 0.0069 16.7 0.2 0.0086 16.4 0.2 1.1 1 0 0 1 1 1 1 Mur ligase family, catalytic domain PUF PF00806.19 NODE_77417_length_204_cov_1.183432_g69476_i0reverse_frame_3 - 1.1e-07 31.1 0.0 0.00083 18.9 0.0 2.2 2 0 0 2 2 2 2 Pumilio-family RNA binding repeat CwsA PF10814.8 NODE_77416_length_204_cov_1.183432_g69475_i0reverse_frame_3 - 0.042 14.0 0.1 0.046 13.9 0.1 1.2 1 0 0 1 1 1 0 Cell wall synthesis protein CwsA PNK3P PF08645.11 NODE_77415_length_204_cov_1.189349_g69474_i0reverse_frame_3 - 4.6e-07 29.7 0.1 6.8e-07 29.1 0.1 1.2 1 0 0 1 1 1 1 Polynucleotide kinase 3 phosphatase Phage_BR0599 PF09356.10 NODE_77412_length_204_cov_1.218935_g69471_i0forward_frame_3 - 0.14 12.5 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Phage conserved hypothetical protein BR0599 Avian_gp85 PF03708.14 NODE_77412_length_204_cov_1.218935_g69471_i0forward_frame_2 - 0.1 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Avian retrovirus envelope protein, gp85 DNA_pol_B PF00136.21 NODE_77410_length_204_cov_1.218935_g69469_i0forward_frame_3 - 8.9e-22 77.4 0.2 9.1e-22 77.4 0.2 1.0 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_2 PF03175.13 NODE_77410_length_204_cov_1.218935_g69469_i0forward_frame_3 - 0.0012 17.8 0.4 0.0012 17.8 0.4 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral Hum_adeno_E3A PF05393.11 NODE_77403_length_204_cov_1.248521_g69462_i0reverse_frame_3 - 0.037 14.0 0.1 0.042 13.8 0.1 1.1 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein tRNA-synt_1e PF01406.19 NODE_77401_length_204_cov_1.266272_g69460_i0reverse_frame_2 - 3.3e-26 92.3 2.0 3.4e-26 92.3 2.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 NODE_77401_length_204_cov_1.266272_g69460_i0reverse_frame_2 - 3.9e-06 25.9 0.1 4.4e-06 25.7 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (M) Imm12 PF15560.6 NODE_77395_length_204_cov_1.295858_g69454_i0reverse_frame_2 - 0.08 12.9 0.0 0.089 12.7 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 12 gp45-slide_C PF09116.10 NODE_77386_length_204_cov_1.355030_g69445_i0reverse_frame_2 - 0.085 12.9 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 gp45 sliding clamp, C terminal FXa_inhibition PF14670.6 NODE_77382_length_204_cov_1.396450_g69441_i0reverse_frame_3 - 0.0022 18.2 1.6 1.2 9.4 0.3 2.1 2 0 0 2 2 2 2 Coagulation Factor Xa inhibitory site Phage_Coat_A PF05357.13 NODE_77380_length_204_cov_1.408284_g69439_i0forward_frame_3 - 0.044 13.6 0.0 0.05 13.4 0.0 1.1 1 0 0 1 1 1 0 Phage Coat Protein A PHD_3 PF13922.6 NODE_77375_length_204_cov_1.414201_g69434_i0reverse_frame_3 - 0.08 13.3 0.3 0.11 12.9 0.3 1.2 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx Sec8_exocyst PF04048.14 NODE_77368_length_204_cov_1.420118_g69427_i0forward_frame_3 - 0.052 13.4 1.4 0.06 13.2 1.4 1.0 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain DUF4743 PF15916.5 NODE_77368_length_204_cov_1.420118_g69427_i0forward_frame_2 - 0.068 13.1 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4743) Pkinase_Tyr PF07714.17 NODE_77362_length_204_cov_1.461538_g69421_i0forward_frame_3 - 0.075 12.3 0.1 0.077 12.3 0.1 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase DUF3649 PF12365.8 NODE_77341_length_204_cov_1.585799_g69400_i0forward_frame_2 - 0.031 14.0 1.3 0.037 13.7 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3649) Ribonuc_L-PSP PF01042.21 NODE_77340_length_204_cov_1.591716_g69399_i0forward_frame_2 - 2.5e-16 59.8 0.0 2.6e-16 59.7 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP SLBB PF10531.9 NODE_77340_length_204_cov_1.591716_g69399_i0forward_frame_2 - 0.12 12.2 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 SLBB domain ArsB PF02040.15 NODE_77339_length_204_cov_1.591716_g69398_i0reverse_frame_2 - 0.027 13.8 1.9 0.029 13.7 1.9 1.0 1 0 0 1 1 1 0 Arsenical pump membrane protein DUF5480 PF17576.2 NODE_77339_length_204_cov_1.591716_g69398_i0reverse_frame_2 - 0.79 9.7 3.8 0.8 9.7 0.1 2.2 2 1 1 3 3 3 0 Family of unknown function (DUF5480) AAA PF00004.29 NODE_77338_length_204_cov_1.597633_g69397_i0reverse_frame_2 - 0.016 15.6 0.0 0.017 15.5 0.0 1.0 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TGF_beta_GS PF08515.12 NODE_77337_length_204_cov_1.597633_g69396_i0forward_frame_3 - 0.26 10.8 0.3 0.26 10.8 0.3 2.9 3 0 0 3 3 3 0 Transforming growth factor beta type I GS-motif FBA_3 PF08268.12 NODE_77334_length_204_cov_1.621302_g69393_i0reverse_frame_3 - 0.012 15.6 0.1 0.013 15.4 0.1 1.1 1 0 0 1 1 1 0 F-box associated domain Hyphal_reg_CWP PF11765.8 NODE_77334_length_204_cov_1.621302_g69393_i0reverse_frame_3 - 0.06 12.3 0.0 0.067 12.1 0.0 1.0 1 0 0 1 1 1 0 Hyphally regulated cell wall protein N-terminal Chorion_2 PF03964.15 NODE_77324_length_204_cov_1.656805_g69383_i0forward_frame_2 - 0.062 14.1 1.2 0.071 14.0 1.2 1.1 1 0 0 1 1 1 0 Chorion family 2 DUF4767 PF15983.5 NODE_77323_length_204_cov_1.662722_g69382_i0reverse_frame_2 - 0.098 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4767) YhfT PF10797.9 NODE_77323_length_204_cov_1.662722_g69382_i0forward_frame_2 - 0.044 12.8 0.0 0.049 12.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF4234 PF14018.6 NODE_77322_length_204_cov_1.698225_g69381_i0reverse_frame_3 - 0.048 13.8 0.1 0.071 13.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4234) DUF1947 PF09183.10 NODE_77322_length_204_cov_1.698225_g69381_i0reverse_frame_2 - 0.047 14.0 0.0 0.061 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1947) YjcB PF15940.5 NODE_77322_length_204_cov_1.698225_g69381_i0forward_frame_3 - 0.04 14.1 0.0 0.048 13.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function DUF3330 PF11809.8 NODE_77321_length_204_cov_1.698225_g69380_i0reverse_frame_3 - 0.28 11.3 2.6 0.39 10.8 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3330) Prok-RING_2 PF14445.6 NODE_77320_length_204_cov_1.727811_g69379_i0forward_frame_2 - 0.018 15.2 0.4 0.27 11.4 0.2 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 2 zf-C2H2_12 PF18658.1 NODE_77320_length_204_cov_1.727811_g69379_i0forward_frame_2 - 0.044 13.3 0.1 0.058 13.0 0.1 1.2 1 0 0 1 1 1 0 Zinc-finger C2H2-type MORN PF02493.20 NODE_77315_length_204_cov_1.769231_g69374_i0forward_frame_2 - 1.5e-08 34.0 0.5 4.7e-05 23.0 0.2 2.5 2 0 0 2 2 2 2 MORN repeat 53-BP1_Tudor PF09038.10 NODE_77315_length_204_cov_1.769231_g69374_i0forward_frame_2 - 0.091 12.7 0.3 0.11 12.5 0.3 1.3 1 1 0 1 1 1 0 Tumour suppressor p53-binding protein-1 Tudor Ribul_P_3_epim PF00834.19 NODE_77315_length_204_cov_1.769231_g69374_i0forward_frame_2 - 0.15 11.4 0.0 0.24 10.8 0.0 1.3 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family DDE_3 PF13358.6 NODE_77314_length_204_cov_1.775148_g69373_i0forward_frame_2 - 0.11 12.3 0.3 0.12 12.1 0.3 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease PsbX PF06596.11 NODE_77312_length_204_cov_1.846154_g69371_i0reverse_frame_2 - 3.6 7.6 8.6 21 5.2 0.1 2.1 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) YrbL-PhoP_reg PF10707.9 NODE_77311_length_204_cov_1.852071_g69370_i0forward_frame_3 - 0.016 14.7 0.0 0.018 14.6 0.0 1.0 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL SID PF11778.8 NODE_77310_length_204_cov_1.857988_g69369_i0reverse_frame_2 - 0.079 13.1 0.2 0.089 12.9 0.2 1.0 1 0 0 1 1 1 0 Septation initiation HrpB4 PF09502.10 NODE_77309_length_204_cov_1.857988_g69368_i0forward_frame_2 - 0.022 14.6 0.0 0.026 14.4 0.0 1.0 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB4) Wbp11 PF09429.10 NODE_77308_length_204_cov_1.857988_g69367_i0reverse_frame_2 - 0.072 13.5 0.1 0.082 13.3 0.1 1.2 1 0 0 1 1 1 0 WW domain binding protein 11 zf-CHCC PF10276.9 NODE_77302_length_204_cov_1.893491_g69361_i0forward_frame_2 - 0.046 13.8 0.0 0.073 13.1 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger domain PI3K_C2 PF00792.24 NODE_77300_length_204_cov_1.893491_g69359_i0forward_frame_2 - 0.0088 16.0 0.1 0.0096 15.8 0.1 1.2 1 0 0 1 1 1 1 Phosphoinositide 3-kinase C2 Peptidase_S41_N PF11918.8 NODE_77297_length_204_cov_1.893491_g69356_i0forward_frame_2 - 0.001 19.3 0.2 0.0012 19.0 0.2 1.1 1 0 0 1 1 1 1 N-terminal domain of Peptidase_S41 in eukaryotic IRBP Herpes_pp85 PF04637.12 NODE_77297_length_204_cov_1.893491_g69356_i0forward_frame_2 - 0.038 12.4 0.0 0.038 12.4 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) FliD_N PF02465.18 NODE_77297_length_204_cov_1.893491_g69356_i0forward_frame_2 - 0.085 13.6 1.2 0.11 13.2 1.2 1.2 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus 7TM_GPCR_Sru PF10322.9 NODE_77296_length_204_cov_1.905325_g69355_i0forward_frame_3 - 0.0011 18.4 0.1 0.0011 18.3 0.1 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Sru CN_hydrolase PF00795.22 NODE_77296_length_204_cov_1.905325_g69355_i0forward_frame_2 - 7.6e-06 25.4 0.0 7.6e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Ank_3 PF13606.6 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 2.4e-13 49.0 1.2 3.8e-06 26.8 0.1 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 5e-13 48.8 1.6 1.6e-05 25.2 0.4 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 5.6e-10 39.7 0.8 2.2e-09 37.7 0.8 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 5.6e-07 30.0 0.9 0.003 18.1 0.1 2.1 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 6.3e-07 29.6 2.9 0.00092 19.5 1.4 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Rh5 PF18515.1 NODE_77289_length_204_cov_1.976331_g69348_i0reverse_frame_3 - 0.026 13.8 0.0 0.03 13.6 0.0 1.0 1 0 0 1 1 1 0 Rh5 coiled-coil domain DUF4633 PF15464.6 NODE_77288_length_204_cov_1.994083_g69347_i0reverse_frame_2 - 0.036 14.2 0.2 0.074 13.2 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4633) ChW PF07538.11 NODE_77286_length_204_cov_2.000000_g69345_i0forward_frame_3 - 0.18 11.7 0.2 0.18 11.7 0.2 1.8 2 0 0 2 2 2 0 Clostridial hydrophobic W HSR PF03172.13 NODE_77281_length_204_cov_2.023669_g69340_i0forward_frame_3 - 0.0069 16.5 0.2 0.0076 16.4 0.2 1.1 1 0 0 1 1 1 1 HSR domain PIP49_C PF12260.8 NODE_77280_length_204_cov_2.023669_g69339_i0forward_frame_3 - 0.066 12.8 0.1 0.068 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 DUF3829 PF12889.7 NODE_77278_length_204_cov_2.035503_g69337_i0reverse_frame_3 - 0.011 15.2 0.2 0.014 14.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3829) DUF4439 PF14530.6 NODE_77275_length_204_cov_2.065089_g69334_i0forward_frame_2 - 0.016 15.9 0.5 0.019 15.7 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4439) PGA2 PF07543.12 NODE_77275_length_204_cov_2.065089_g69334_i0forward_frame_2 - 0.49 10.4 6.1 0.63 10.0 6.1 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 DNA_pol_phi PF04931.13 NODE_77275_length_204_cov_2.065089_g69334_i0forward_frame_2 - 2.4 6.2 7.2 2.8 5.9 7.2 1.0 1 0 0 1 1 1 0 DNA polymerase phi Phage_holin_3_7 PF05449.11 NODE_77272_length_204_cov_2.076923_g69331_i0forward_frame_3 - 0.11 12.5 0.5 0.16 12.0 0.5 1.3 1 0 0 1 1 1 0 Putative 3TM holin, Phage_holin_3 Glyco_hydro_31 PF01055.26 NODE_77270_length_204_cov_2.082840_g69329_i0reverse_frame_2 - 0.00053 19.3 0.1 0.00053 19.3 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 RseC_MucC PF04246.12 NODE_77269_length_204_cov_2.082840_g69328_i0reverse_frame_2 - 2.1 8.3 5.2 2.4 8.1 5.2 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC zf-XS PF03470.14 NODE_77267_length_204_cov_2.106509_g69326_i0forward_frame_3 - 0.094 13.0 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 XS zinc finger domain Chitin_synth_2 PF03142.15 NODE_77267_length_204_cov_2.106509_g69326_i0forward_frame_2 - 0.0013 17.4 0.1 0.0013 17.4 0.1 1.0 1 0 0 1 1 1 1 Chitin synthase Kinesin PF00225.23 NODE_77259_length_204_cov_2.147929_g69318_i0reverse_frame_2 - 1.5e-25 89.9 0.2 1.6e-25 89.8 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Phage_integrase PF00589.22 NODE_77257_length_204_cov_2.159763_g69316_i0reverse_frame_3 - 0.0024 17.7 0.0 0.0026 17.6 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family HTH_25 PF13413.6 NODE_77253_length_204_cov_2.218935_g69312_i0reverse_frame_3 - 0.84 9.5 4.7 4.8 7.1 0.6 2.6 2 1 0 2 2 2 0 Helix-turn-helix domain Lip_A_acyltrans PF03279.13 NODE_77252_length_204_cov_2.236686_g69311_i0reverse_frame_2 - 0.069 12.3 0.0 0.08 12.1 0.0 1.0 1 0 0 1 1 1 0 Bacterial lipid A biosynthesis acyltransferase KCNQ2_u3 PF16642.5 NODE_77249_length_204_cov_2.242604_g69308_i0forward_frame_2 - 5.8 8.0 7.3 7.6 7.6 1.8 2.0 1 1 1 2 2 2 0 Unstructured region on Potassium channel subunit alpha KvLQT2 TMIE PF16038.5 NODE_77243_length_204_cov_2.325444_g69302_i0reverse_frame_2 - 0.022 14.6 0.2 0.03 14.2 0.2 1.2 1 0 0 1 1 1 0 TMIE protein Chitin_synth_1 PF01644.17 NODE_77242_length_204_cov_2.331361_g69301_i0forward_frame_3 - 0.053 13.5 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 Chitin synthase Baculo_11_kDa PF06143.11 NODE_77239_length_204_cov_2.360947_g69298_i0reverse_frame_2 - 0.017 14.6 0.3 0.017 14.6 0.3 1.6 2 0 0 2 2 2 0 Baculovirus 11 kDa family DUF5107 PF17128.4 NODE_77237_length_204_cov_2.396450_g69296_i0reverse_frame_3 - 0.091 11.9 0.0 0.1 11.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5107) RAI16-like PF10257.9 NODE_77219_length_204_cov_2.698225_g69278_i0forward_frame_2 - 0.0001 21.3 0.2 0.0001 21.3 0.2 1.0 1 0 0 1 1 1 1 Retinoic acid induced 16-like protein Orf78 PF06024.12 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_3 - 0.0016 18.7 1.4 0.0018 18.6 1.4 1.1 1 0 0 1 1 1 1 Orf78 (ac78) TMEM154 PF15102.6 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_3 - 0.024 14.6 5.3 0.028 14.3 5.3 1.1 1 0 0 1 1 1 0 TMEM154 protein family Amnionless PF14828.6 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_3 - 0.13 11.0 3.8 0.13 11.0 3.8 1.0 1 0 0 1 1 1 0 Amnionless HemY_N PF07219.13 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.00018 21.7 5.8 0.00025 21.2 5.8 1.2 1 0 0 1 1 1 1 HemY protein N-terminus Trp_oprn_chp PF09534.10 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.0037 17.1 1.4 0.0044 16.8 1.4 1.1 1 0 0 1 1 1 1 Tryptophan-associated transmembrane protein (Trp_oprn_chp) 7TM_GPCR_Srx PF10328.9 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.0061 16.2 0.6 0.0066 16.1 0.6 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srx DUF4834 PF16118.5 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.0083 17.1 0.2 0.0098 16.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) DUF2749 PF10907.8 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.05 13.8 10.0 0.091 12.9 10.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2749) Shisa PF13908.6 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.12 12.6 3.9 0.14 12.4 3.9 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF5305 PF17231.2 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.14 11.5 0.6 0.18 11.2 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) LapA_dom PF06305.11 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.2 11.5 5.4 0.49 10.3 5.4 1.7 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF929 PF06053.11 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 1.1 8.5 5.1 1.3 8.3 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) Herpes_UL56 PF04534.12 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 2.2 7.7 9.3 2.7 7.4 9.3 1.0 1 0 0 1 1 1 0 Herpesvirus UL56 protein DUF1505 PF07403.11 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 2.3 8.4 5.8 5 7.3 5.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1505) AJAP1_PANP_C PF15298.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_3 - 0.033 14.4 7.2 0.033 14.4 7.2 1.1 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF688 PF05097.12 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_3 - 0.11 11.7 0.2 0.12 11.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF688) BatD PF13584.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.014 14.3 0.0 0.014 14.2 0.0 1.0 1 0 0 1 1 1 0 Oxygen tolerance Glucos_trans_II PF14264.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.018 14.4 0.0 0.019 14.3 0.0 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII PAP2_3 PF14378.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.034 13.8 1.5 0.039 13.6 1.5 1.0 1 0 0 1 1 1 0 PAP2 superfamily DUF4381 PF14316.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.036 14.3 0.7 0.041 14.1 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) DUF4131 PF13567.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.13 11.9 2.2 0.17 11.6 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) SRTM1 PF15872.5 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.15 12.2 0.5 0.18 12.0 0.5 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 CcmD PF04995.14 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 2.2 8.4 11.0 2.8 8.1 11.0 1.1 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Ank PF00023.30 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 3.4e-06 27.3 0.3 1.8e-05 24.9 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 8e-06 26.4 0.0 9e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 1.1e-05 25.5 0.1 2.4e-05 24.4 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 5.5e-05 23.6 0.1 0.00011 22.7 0.1 1.5 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 0.00011 22.4 0.1 0.00015 22.0 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Orn_Arg_deC_N PF02784.16 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 0.15 11.4 0.0 0.15 11.4 0.0 1.0 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MFS_1 PF07690.16 NODE_77205_length_204_cov_3.094675_g69264_i0reverse_frame_2 - 0.00096 18.2 0.3 0.00096 18.2 0.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily EIID-AGA PF03613.14 NODE_77203_length_204_cov_3.159763_g69262_i0reverse_frame_2 - 0.034 13.3 1.2 0.039 13.1 1.2 1.1 1 0 0 1 1 1 0 PTS system mannose/fructose/sorbose family IID component Stevor PF17410.2 NODE_77203_length_204_cov_3.159763_g69262_i0reverse_frame_2 - 0.095 12.2 0.0 0.095 12.2 0.0 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Arm-DNA-bind_1 PF09003.10 NODE_77201_length_204_cov_3.355030_g69260_i0forward_frame_3 - 0.013 15.6 0.8 0.017 15.2 0.8 1.2 1 0 0 1 1 1 0 Bacteriophage lambda integrase, Arm DNA-binding domain ABC_membrane_3 PF13748.6 NODE_77198_length_204_cov_3.751479_g69257_i0reverse_frame_3 - 0.063 12.5 0.3 0.07 12.4 0.3 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region DUF2149 PF09919.9 NODE_77197_length_204_cov_4.100592_g69256_i0reverse_frame_3 - 0.0087 16.3 0.3 0.0093 16.2 0.3 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) SIT PF15330.6 NODE_77197_length_204_cov_4.100592_g69256_i0reverse_frame_3 - 0.013 15.9 0.1 0.014 15.8 0.1 1.1 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT DUF4446 PF14584.6 NODE_77197_length_204_cov_4.100592_g69256_i0reverse_frame_3 - 0.053 13.5 0.4 0.053 13.5 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) ATP-synt_B PF00430.18 NODE_77197_length_204_cov_4.100592_g69256_i0reverse_frame_3 - 0.06 13.4 0.1 0.069 13.2 0.1 1.1 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) PAC4 PF16093.5 NODE_77196_length_204_cov_4.183432_g69255_i0reverse_frame_2 - 0.067 13.4 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 SHR3_chaperone PF08229.11 NODE_77196_length_204_cov_4.183432_g69255_i0forward_frame_3 - 0.014 14.4 0.1 0.016 14.2 0.1 1.0 1 0 0 1 1 1 0 ER membrane protein SH3 LRR_9 PF14580.6 NODE_77195_length_204_cov_4.769231_g69254_i0forward_frame_3 - 0.0064 16.0 0.0 0.0065 16.0 0.0 1.0 1 0 0 1 1 1 1 Leucine-rich repeat Zwint PF15556.6 NODE_77189_length_204_cov_13.313609_g69248_i0forward_frame_3 - 0.12 11.9 0.6 0.14 11.6 0.6 1.0 1 0 0 1 1 1 0 ZW10 interactor Nha1_C PF08619.10 NODE_77181_length_204_cov_32.928994_g69240_i0forward_frame_3 - 0.24 10.6 8.4 0.25 10.5 8.4 1.0 1 0 0 1 1 1 0 Alkali metal cation/H+ antiporter Nha1 C terminus YabA PF06156.13 NODE_77181_length_204_cov_32.928994_g69240_i0forward_frame_2 - 0.07 13.8 1.0 0.097 13.3 1.0 1.3 1 0 0 1 1 1 0 Initiation control protein YabA FliL PF03748.14 NODE_77181_length_204_cov_32.928994_g69240_i0forward_frame_2 - 0.13 12.8 2.7 0.19 12.3 2.7 1.4 1 1 0 1 1 1 0 Flagellar basal body-associated protein FliL Apelin PF15360.6 NODE_77176_length_204_cov_38.656805_g69235_i0reverse_frame_2 - 0.25 12.0 4.4 4.7 7.8 1.4 2.1 2 0 0 2 2 2 0 APJ endogenous ligand DUF1582 PF07621.11 NODE_77172_length_204_cov_41.088757_g69231_i0reverse_frame_2 - 0.004 17.0 1.3 0.032 14.2 0.5 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1582) Claudin_3 PF06653.11 NODE_77164_length_204_cov_47.153846_g69223_i0forward_frame_3 - 0.16 11.9 8.6 0.16 11.9 8.6 1.0 1 0 0 1 1 1 0 Tight junction protein, Claudin-like DUF4813 PF16072.5 NODE_77162_length_204_cov_49.627219_g69221_i0reverse_frame_2 - 0.0018 18.0 3.3 0.0022 17.7 3.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4813) ALG3 PF05208.13 NODE_77160_length_204_cov_52.550296_g69219_i0reverse_frame_3 - 0.36 10.2 4.8 0.39 10.1 4.8 1.0 1 0 0 1 1 1 0 ALG3 protein Crystall PF00030.19 NODE_77159_length_204_cov_53.798817_g69218_i0reverse_frame_2 - 0.14 12.4 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Beta/Gamma crystallin DUF2748 PF10871.8 NODE_77157_length_204_cov_53.982249_g69216_i0reverse_frame_3 - 0.19 10.3 0.0 0.21 10.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2748) zf-C2H2 PF00096.26 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 2.2e-06 27.8 1.4 3e-06 27.4 1.4 1.2 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.00048 20.7 0.8 0.00068 20.3 0.8 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-met PF12874.7 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0013 19.1 0.9 0.0024 18.2 0.9 1.4 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0022 18.3 3.0 0.0031 17.7 3.0 1.3 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-LYAR PF08790.11 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0061 16.4 0.3 0.0093 15.9 0.3 1.3 1 0 0 1 1 1 1 LYAR-type C2HC zinc finger DUF629 PF04780.12 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0067 15.0 0.2 0.0072 14.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF629) zf-C2H2_2 PF12756.7 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0069 16.7 0.2 0.0077 16.5 0.2 1.1 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) Actin_micro PF17003.5 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0073 15.5 0.3 0.0074 15.5 0.3 1.0 1 0 0 1 1 1 1 Putative actin-like family FOXP-CC PF16159.5 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.052 14.2 0.1 0.064 13.9 0.1 1.1 1 0 0 1 1 1 0 FOXP coiled-coil domain Zn-ribbon_8 PF09723.10 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.053 13.6 0.2 0.088 12.9 0.2 1.4 1 0 0 1 1 1 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.1 12.6 0.7 0.14 12.2 0.7 1.3 1 0 0 1 1 1 0 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.15 12.6 3.2 0.23 12.0 0.5 2.0 2 0 0 2 2 2 0 Zinc-finger double domain PID PF00640.23 NODE_77152_length_204_cov_62.633136_g69211_i0forward_frame_2 - 0.054 13.5 0.1 0.085 12.9 0.1 1.3 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) Shisa PF13908.6 NODE_77146_length_204_cov_68.792899_g69205_i0reverse_frame_3 - 0.0064 16.8 0.1 0.0064 16.8 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator ETRAMP PF09716.10 NODE_77146_length_204_cov_68.792899_g69205_i0reverse_frame_3 - 0.045 13.8 4.4 0.076 13.1 4.4 1.4 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF3375 PF11855.8 NODE_77146_length_204_cov_68.792899_g69205_i0forward_frame_3 - 0.009 15.0 0.4 0.01 14.8 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3375) TB2_DP1_HVA22 PF03134.19 NODE_77146_length_204_cov_68.792899_g69205_i0forward_frame_2 - 0.36 10.8 9.7 0.41 10.6 9.7 1.1 1 0 0 1 1 1 0 TB2/DP1, HVA22 family OGFr_III PF04680.13 NODE_77141_length_204_cov_74.804734_g69200_i0forward_frame_3 - 0.76 10.5 3.1 2.8 8.7 3.1 1.9 1 1 0 1 1 1 0 Opioid growth factor receptor repeat ESPR PF13018.6 NODE_77134_length_204_cov_87.899408_g69193_i0reverse_frame_2 - 0.17 11.7 0.4 0.29 11.0 0.4 1.4 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system BORCS8 PF10167.9 NODE_77134_length_204_cov_87.899408_g69193_i0forward_frame_3 - 0.046 13.6 0.0 0.049 13.6 0.0 1.0 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 8 RseC_MucC PF04246.12 NODE_77131_length_204_cov_100.668639_g69190_i0forward_frame_3 - 0.81 9.6 4.3 0.97 9.4 4.3 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC 2OG-FeII_Oxy_3 PF13640.6 NODE_77130_length_204_cov_103.952663_g69189_i0forward_frame_3 - 0.00038 21.3 0.0 0.00043 21.1 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 NODE_77130_length_204_cov_103.952663_g69189_i0forward_frame_3 - 0.031 14.7 0.0 0.037 14.4 0.0 1.2 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase GP88 PF17338.2 NODE_77129_length_204_cov_122.692308_g69188_i0reverse_frame_3 - 0.084 12.3 0.2 0.085 12.3 0.2 1.1 1 0 0 1 1 1 0 Gene product 88 LANC_like PF05147.13 NODE_77129_length_204_cov_122.692308_g69188_i0forward_frame_3 - 0.019 13.5 0.0 0.019 13.5 0.0 1.0 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein Vitelline_membr PF10542.9 NODE_77129_length_204_cov_122.692308_g69188_i0forward_frame_3 - 0.08 12.8 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Vitelline membrane cysteine-rich region Lamprin PF06403.11 NODE_77120_length_204_cov_263.189349_g69179_i0forward_frame_2 - 0.15 12.0 17.8 0.065 13.2 7.7 2.1 1 1 1 2 2 2 0 Lamprin Gaa1 PF04114.14 NODE_77119_length_204_cov_272.715976_g69178_i0reverse_frame_3 - 0.55 9.2 5.0 0.59 9.1 5.0 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component zinc_ribbon_15 PF17032.5 NODE_77118_length_204_cov_286.573964_g69177_i0reverse_frame_2 - 0.096 13.4 0.1 0.11 13.3 0.1 1.1 1 0 0 1 1 1 0 zinc-ribbon family DUF4769 PF15992.5 NODE_77115_length_204_cov_798.988166_g69174_i0reverse_frame_3 - 0.19 11.5 2.0 0.21 11.4 2.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) MTTB PF06253.11 NODE_77115_length_204_cov_798.988166_g69174_i0forward_frame_3 - 0.092 10.7 0.0 0.11 10.5 0.0 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) DFF40 PF09230.10 NODE_77111_length_204_cov_91292.556213_g69170_i0reverse_frame_3 - 0.00021 21.0 0.2 0.00024 20.8 0.2 1.0 1 0 0 1 1 1 1 DNA fragmentation factor 40 kDa DUF928 PF06051.12 NODE_77111_length_204_cov_91292.556213_g69170_i0forward_frame_3 - 0.11 12.3 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF928) NIF PF03031.18 ORF99674 - 1.2e-05 25.1 0.0 1.2e-05 25.1 0.0 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Ecm33 PF12454.8 ORF99592 - 0.094 12.9 0.2 0.15 12.2 0.2 1.3 1 0 0 1 1 1 0 GPI-anchored cell wall organization protein Leptin PF02024.15 ORF99462 - 0.085 12.6 0.5 0.087 12.6 0.5 1.0 1 0 0 1 1 1 0 Leptin CreD PF06123.12 ORF99462 - 0.76 8.5 4.5 0.77 8.5 4.5 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD Peptidase_C7 PF01830.18 ORF98851 - 0.16 11.4 0.2 0.17 11.3 0.2 1.1 1 0 0 1 1 1 0 Peptidase C7 family MCR PF18509.1 ORF98699 - 0.053 13.1 0.7 0.36 10.4 0.2 2.2 2 0 0 2 2 2 0 Magnetochrome domain Oxidoreduct_C PF16490.5 ORF98380 - 0.17 11.6 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain DUF1353 PF07087.11 ORF98041 - 0.15 11.8 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1353) DUF2887 PF11103.8 ORF97974 - 0.014 15.4 1.8 0.016 15.2 1.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2887) PriCT_1 PF08708.11 ORF97974 - 0.15 11.8 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) Med16 PF11635.8 ORF97854 - 0.027 12.4 0.5 0.027 12.4 0.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 DUF1631 PF07793.11 ORF97854 - 0.05 12.0 0.4 0.055 11.9 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) Cyt-b5 PF00173.28 ORF97617 - 5.1e-10 39.4 0.5 9.8e-08 32.0 0.5 2.1 1 1 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain AP2 PF00847.20 ORF96737 - 0.022 15.0 0.2 0.029 14.6 0.2 1.2 1 0 0 1 1 1 0 AP2 domain COX7C PF02935.16 ORF96523 - 0.036 14.3 5.2 0.055 13.7 5.2 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc TruB_C_2 PF16198.5 ORF96391 - 6.4e-13 48.6 0.8 7.4e-13 48.4 0.8 1.1 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain Pkinase PF00069.25 ORF9628 - 5e-06 26.1 0.1 5.4e-06 26.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain SNAD3 PF18749.1 ORF9628 - 0.046 12.9 0.1 0.05 12.8 0.1 1.0 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 3 Syndecan PF01034.20 ORF95953 - 9.1e-05 22.3 0.0 0.0001 22.1 0.0 1.2 1 0 0 1 1 1 1 Syndecan domain DUF5325 PF17259.2 ORF95953 - 0.0051 16.7 0.4 0.007 16.2 0.4 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5325) EphA2_TM PF14575.6 ORF95953 - 0.006 17.4 0.0 0.0069 17.2 0.0 1.1 1 0 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain Adeno_E3_CR2 PF02439.15 ORF95953 - 0.013 15.2 0.1 0.02 14.7 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 SieB PF14163.6 ORF95953 - 0.035 13.6 0.0 0.041 13.4 0.0 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B DUF5305 PF17231.2 ORF95953 - 0.044 13.2 0.0 0.044 13.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Cadherin_C_2 PF16492.5 ORF95953 - 0.044 14.5 0.0 0.052 14.3 0.0 1.1 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal Glycophorin_A PF01102.18 ORF95953 - 0.066 13.5 0.0 0.075 13.3 0.0 1.1 1 0 0 1 1 1 0 Glycophorin A PhoR PF11808.8 ORF95953 - 0.069 13.6 0.0 0.073 13.5 0.0 1.1 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR DUF4307 PF14155.6 ORF95953 - 0.08 12.8 0.0 0.088 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) Rax2 PF12768.7 ORF95953 - 0.083 12.3 0.0 0.088 12.3 0.0 1.1 1 0 0 1 1 1 0 Cortical protein marker for cell polarity OppC_N PF12911.7 ORF95953 - 0.1 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C MtrF PF09472.10 ORF95953 - 1.3 8.5 4.2 1.9 8.0 4.2 1.3 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) IFP_35_N PF07334.13 ORF95767 - 0.027 14.5 2.1 0.028 14.5 0.5 1.7 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Gal_mutarotas_2 PF13802.6 ORF95402 - 0.05 13.9 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 Galactose mutarotase-like Plasmid_parti PF01672.16 ORF95234 - 0.096 13.3 1.4 0.11 13.1 1.4 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein DUF2214 PF09980.9 ORF95096 - 7.6e-05 22.5 0.6 0.00012 21.9 0.6 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2214) Tmpp129 PF10272.9 ORF95045 - 0.026 13.8 0.0 0.028 13.7 0.0 1.0 1 0 0 1 1 1 0 Putative transmembrane protein precursor MFS_1 PF07690.16 ORF94723 - 2.3e-05 23.5 9.7 2.5e-05 23.4 9.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF94723 - 0.056 12.3 7.9 0.06 12.2 7.9 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter BES1_N PF05687.13 ORF94482 - 1.9 8.8 5.3 2.2 8.7 5.3 1.0 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal DUF569 PF04601.13 ORF93997 - 0.093 12.4 0.1 0.098 12.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF569) DUF3176 PF11374.8 ORF93740 - 0.029 14.6 0.0 0.031 14.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3176) DUF4533 PF15047.6 ORF93273 - 0.0087 15.6 6.0 0.0087 15.6 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4533) LMBR1 PF04791.16 ORF93273 - 0.15 10.9 2.3 0.16 10.9 2.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein TMPIT PF07851.13 ORF93273 - 0.5 9.6 3.6 0.53 9.5 3.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein TFA2_Winged_2 PF18121.1 ORF9324 - 0.0046 16.6 0.0 0.011 15.4 0.0 1.5 1 1 1 2 2 2 2 TFA2 Winged helix domain 2 DUF4244 PF14029.6 ORF93239 - 0.16 11.5 0.1 0.23 10.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4244) MFS_1 PF07690.16 ORF93136 - 2.3e-05 23.5 9.7 2.5e-05 23.4 9.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF93136 - 0.056 12.3 7.9 0.06 12.2 7.9 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter MazG_C PF18722.1 ORF92719 - 0.17 11.4 0.1 0.17 11.4 0.1 1.1 1 0 0 1 1 1 0 MazG C-terminal domain Sec23_helical PF04815.15 ORF92134 - 0.06 13.2 0.0 0.066 13.0 0.0 1.1 1 0 0 1 1 1 0 Sec23/Sec24 helical domain DUF2663 PF10864.8 ORF91538 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF2663 PF10864.8 ORF90939 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Chitin_synth_1 PF01644.17 ORF90568 - 0.011 15.7 0.0 0.011 15.7 0.0 1.0 1 0 0 1 1 1 0 Chitin synthase ALG3 PF05208.13 ORF90443 - 0.0086 15.5 4.4 0.0088 15.5 4.4 1.0 1 0 0 1 1 1 1 ALG3 protein DUF2663 PF10864.8 ORF90256 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF2663 PF10864.8 ORF89813 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Acetyltransf_13 PF13880.6 ORF89636 - 0.083 12.9 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase F_actin_cap_B PF01115.17 ORF89583 - 2.6e-07 30.5 0.1 2.9e-07 30.4 0.1 1.0 1 0 0 1 1 1 1 F-actin capping protein, beta subunit NADH_B2 PF14813.6 ORF8928 - 0.078 12.8 0.4 0.095 12.5 0.4 1.1 1 0 0 1 1 1 0 NADH dehydrogenase 1 beta subcomplex subunit 2 DUF5337 PF17272.2 ORF8928 - 0.081 12.8 0.9 0.4 10.5 1.0 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5337) PTH2 PF01981.16 ORF89258 - 9.2e-17 61.4 0.0 9.6e-17 61.4 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Resistin PF06954.11 ORF89258 - 0.045 14.3 0.2 0.047 14.2 0.2 1.2 1 0 0 1 1 1 0 Resistin DSBA PF01323.20 ORF88857 - 0.28 10.9 1.8 0.26 11.1 1.8 1.0 1 0 0 1 1 1 0 DSBA-like thioredoxin domain HR_lesion PF05514.11 ORF8831 - 0.00012 22.3 0.3 0.00013 22.1 0.3 1.1 1 0 0 1 1 1 1 HR-like lesion-inducing Gal_mutarotas_2 PF13802.6 ORF87770 - 0.05 13.9 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 Galactose mutarotase-like BBL5 PF07289.11 ORF87722 - 0.0044 16.1 0.1 0.0056 15.8 0.1 1.1 1 0 0 1 1 1 1 Bardet-Biedl syndrome 5 protein MazG_C PF18722.1 ORF87703 - 0.17 11.4 0.1 0.17 11.4 0.1 1.1 1 0 0 1 1 1 0 MazG C-terminal domain DUF1192 PF06698.11 ORF87659 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) SHIPPO-rpt PF07004.12 ORF86939 - 3.7e-06 27.6 0.9 0.062 14.2 0.2 2.2 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF86939 - 0.002 17.7 0.1 0.002 17.7 0.1 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal DUF647 PF04884.14 ORF86779 - 0.05 13.2 0.1 0.055 13.1 0.1 1.1 1 0 0 1 1 1 0 Vitamin B6 photo-protection and homoeostasis DUF3748 PF12566.8 ORF86495 - 0.097 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3748) FKBP_N_2 PF18023.1 ORF86446 - 0.051 13.7 0.1 0.059 13.5 0.1 1.1 1 0 0 1 1 1 0 BDBT FKBP like N-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks371.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks371.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks371.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks371.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:26:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Dehyd-heme_bind PF09098.10 ORF85962 - 0.019 14.6 0.7 0.021 14.5 0.7 1.1 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding Herpes_BBRF1 PF04793.12 ORF85960 - 0.31 10.0 1.7 0.33 9.9 1.7 1.0 1 0 0 1 1 1 0 BRRF1-like protein DUF5506 PF17611.2 ORF85955 - 0.16 11.8 0.0 0.17 11.8 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5506) FSAP_sig_propep PF03032.15 ORF85019 - 6.6 6.8 5.2 2.7 8.1 2.0 1.8 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide Meth_synt_2 PF01717.18 ORF84836 - 0.18 11.0 0.0 0.18 11.0 0.0 1.0 1 0 0 1 1 1 0 Cobalamin-independent synthase, Catalytic domain Mem_trans PF03547.18 ORF84784 - 0.058 11.8 0.4 0.056 11.8 0.4 1.0 1 0 0 1 1 1 0 Membrane transport protein Astro_capsid_p PF12226.8 ORF84784 - 7.8 5.5 14.8 8.5 5.4 14.8 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DinB PF05163.12 ORF84720 - 0.01 15.8 0.1 0.014 15.3 0.1 1.2 1 0 0 1 1 1 0 DinB family DUF3377 PF11857.8 ORF84720 - 0.095 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) Ribosomal_L29 PF00831.23 ORF84645 - 0.017 15.1 0.1 0.023 14.6 0.1 1.2 1 0 0 1 1 1 0 Ribosomal L29 protein DUF1117 PF06547.12 ORF84645 - 0.062 13.9 0.0 0.071 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) OppC_N PF12911.7 ORF84606 - 0.24 11.4 2.1 2 8.5 2.1 2.1 1 1 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C DevR PF01905.16 ORF84252 - 0.2 10.7 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated negative auto-regulator DevR/Csa2 COX15-CtaA PF02628.15 ORF83887 - 0.069 12.2 0.0 0.069 12.2 0.0 1.0 1 0 0 1 1 1 0 Cytochrome oxidase assembly protein DNA_pol3_a_NII PF11490.8 ORF83861 - 0.15 11.9 0.2 0.16 11.8 0.2 1.0 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II Ank_4 PF13637.6 ORF83634 - 1.5e-11 44.6 0.3 3.7e-05 24.2 0.0 2.1 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF83634 - 2.4e-07 30.9 0.1 5.2e-07 29.8 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF83634 - 6.7e-07 29.8 0.0 7.7e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF83634 - 7.7e-06 26.1 0.2 1.2e-05 25.5 0.2 1.4 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF83634 - 2.3e-05 24.4 0.0 0.00044 20.5 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Tn7_Tnp_TnsA_C PF08721.11 ORF83166 - 0.012 16.2 0.7 0.017 15.7 0.7 1.1 1 0 0 1 1 1 0 TnsA endonuclease C terminal TcpE PF12648.7 ORF82693 - 0.043 14.3 2.9 0.051 14.1 2.9 1.2 1 0 0 1 1 1 0 TcpE family Ferlin_C PF16165.5 ORF82693 - 0.25 11.3 5.2 0.14 12.1 3.8 1.3 1 1 0 1 1 1 0 Ferlin C-terminus Baculo_11_kDa PF06143.11 ORF82693 - 0.59 9.8 6.7 0.49 10.0 5.7 1.4 1 1 0 1 1 1 0 Baculovirus 11 kDa family zf-CRD PF17979.1 ORF81701 - 1.3e-05 25.4 0.1 1.3e-05 25.3 0.1 1.0 1 0 0 1 1 1 1 Cysteine rich domain with multizinc binding regions DUF1314 PF07013.11 ORF81526 - 0.047 13.6 0.0 0.05 13.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1314) Ntox43 PF15537.6 ORF81456 - 0.036 14.1 0.0 0.039 14.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial toxin 43 Tn7_Tnp_TnsA_C PF08721.11 ORF812 - 0.012 16.2 0.7 0.017 15.7 0.7 1.1 1 0 0 1 1 1 0 TnsA endonuclease C terminal LapA_dom PF06305.11 ORF81022 - 0.1 12.4 4.7 0.15 11.9 4.7 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Innexin PF00876.18 ORF81022 - 0.38 10.0 3.3 0.42 9.8 3.3 1.0 1 0 0 1 1 1 0 Innexin DUF4250 PF14056.6 ORF80863 - 0.077 13.0 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) DUF5345 PF17280.2 ORF80863 - 0.46 10.5 8.4 0.6 10.1 8.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5345) BC10 PF06726.12 ORF80863 - 0.63 10.3 10.9 1 9.6 3.4 2.1 1 1 1 2 2 2 0 Bladder cancer-related protein BC10 E2 PF08199.11 ORF80386 - 1.2 9.1 6.5 0.64 10.0 1.7 2.1 2 0 0 2 2 2 0 Bacteriophage E2-like protein PD-C2-AF1 PF09310.10 ORF80136 - 0.11 11.9 0.0 0.28 10.5 0.0 1.5 1 1 1 2 2 2 0 POU domain, class 2, associating factor 1 TcA_TcB_BD PF18276.1 ORF79595 - 0.03 13.4 0.0 0.032 13.3 0.0 1.0 1 0 0 1 1 1 0 Tc toxin complex TcA C-terminal TcB-binding domain DUF2663 PF10864.8 ORF79383 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) zinc_ribbon_2 PF13240.6 ORF79341 - 0.0011 18.6 1.3 0.0016 18.1 0.7 1.5 2 0 0 2 2 2 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF79341 - 0.015 14.7 2.0 0.015 14.7 2.0 2.0 2 1 0 2 2 2 0 zinc-ribbon domain zf-BED PF02892.15 ORF79341 - 0.034 14.2 1.3 0.052 13.6 1.3 1.3 1 0 0 1 1 1 0 BED zinc finger DZR PF12773.7 ORF79341 - 0.038 14.0 3.7 0.068 13.2 3.7 1.4 1 1 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 ORF79341 - 0.12 12.4 1.5 0.14 12.2 1.5 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C3HC4_3 PF13920.6 ORF79341 - 0.14 12.0 5.4 0.079 12.8 3.0 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-FCS PF06467.14 ORF79341 - 0.49 10.4 6.2 1.7 8.7 1.0 2.3 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif GST_C_3 PF14497.6 ORF78933 - 0.0007 19.7 0.1 0.00085 19.5 0.1 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain PSA_CBD PF18341.1 ORF78933 - 0.04 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 PSA endolysin C-terminal cell wall binding domain GST_C PF00043.25 ORF78933 - 0.056 13.7 0.0 0.075 13.3 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Nuclease_act PF08133.11 ORF78933 - 0.083 13.1 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 Anticodon nuclease activator family QueH PF02677.14 ORF78605 - 0.042 13.9 1.1 0.054 13.6 1.1 1.2 1 0 0 1 1 1 0 Epoxyqueuosine reductase QueH RsgA_N PF16745.5 ORF78552 - 0.15 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 RsgA N-terminal domain RSB_motif PF16294.5 ORF78498 - 4.1 7.7 11.2 4.7 7.5 11.2 1.1 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif DUF2427 PF10348.9 ORF78316 - 0.013 15.3 0.2 0.013 15.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2427) LapA_dom PF06305.11 ORF78145 - 0.1 12.4 4.7 0.15 11.9 4.7 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Innexin PF00876.18 ORF78145 - 0.38 10.0 3.3 0.42 9.8 3.3 1.0 1 0 0 1 1 1 0 Innexin BLI1 PF17324.2 ORF77479 - 0.0065 17.1 2.1 0.011 16.3 2.1 1.4 1 1 0 1 1 1 1 BLOC-1 interactor 1 S_4TM PF18159.1 ORF77184 - 9.3 5.5 8.4 9.1 5.5 8.4 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain TraG_N PF07916.11 ORF77184 - 9.6 4.9 11.2 12 4.7 11.2 1.1 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DM13 PF10517.9 ORF76970 - 0.079 13.6 0.1 0.087 13.4 0.1 1.1 1 0 0 1 1 1 0 Electron transfer DM13 DUF4486 PF14858.6 ORF76512 - 0.042 12.3 0.4 0.041 12.4 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4486) NSP16 PF06460.12 ORF76357 - 0.027 13.6 0.1 0.027 13.6 0.1 1.1 1 0 0 1 1 1 0 Coronavirus NSP16 Skp1_POZ PF03931.15 ORF76204 - 0.028 14.6 0.0 0.04 14.1 0.0 1.2 1 0 0 1 1 1 0 Skp1 family, tetramerisation domain DUF2663 PF10864.8 ORF76163 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF2443 PF10398.9 ORF75907 - 0.055 13.5 0.0 0.083 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) Ice_nucleation PF00818.17 ORF75463 - 0.43 10.7 7.2 2.3 8.5 6.4 2.3 2 0 0 2 2 2 0 Ice nucleation protein repeat COX15-CtaA PF02628.15 ORF75397 - 0.069 12.2 0.0 0.069 12.2 0.0 1.0 1 0 0 1 1 1 0 Cytochrome oxidase assembly protein TMEM156 PF15106.6 ORF75343 - 0.021 14.3 2.1 0.025 14.0 2.1 1.1 1 0 0 1 1 1 0 TMEM156 protein family AAA_lid_4 PF17864.1 ORF74152 - 0.065 13.0 0.1 0.084 12.6 0.1 1.2 1 0 0 1 1 1 0 RuvB AAA lid domain DUF4481 PF14800.6 ORF73743 - 0.054 13.0 2.5 0.058 12.9 2.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) Herpes_LMP1 PF05297.11 ORF73743 - 3.6 6.7 5.2 4.1 6.5 5.2 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Nicastrin PF05450.15 ORF73269 - 0.12 11.8 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Nicastrin DUF1295 PF06966.12 ORF73148 - 0.016 14.7 0.0 0.02 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1295) DM13 PF10517.9 ORF72055 - 0.079 13.6 0.1 0.087 13.4 0.1 1.1 1 0 0 1 1 1 0 Electron transfer DM13 FSAP_sig_propep PF03032.15 ORF71946 - 6.6 6.8 5.2 2.7 8.1 2.0 1.8 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide DUF436 PF04260.12 ORF71918 - 0.019 14.5 0.0 0.019 14.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF436) THF_DHG_CYH_C PF02882.19 ORF71738 - 1.2e-21 76.7 0.2 1.3e-21 76.6 0.2 1.0 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BRK PF07533.16 ORF71738 - 0.0091 15.6 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 BRK domain IL2RB_N1 PF18707.1 ORF70668 - 0.0092 16.5 0.1 0.011 16.3 0.1 1.2 1 0 0 1 1 1 1 Interleukin-2 receptor subunit beta N-terminal domain 1 IL2RB_N1 PF18707.1 ORF70666 - 0.0092 16.5 0.1 0.011 16.3 0.1 1.2 1 0 0 1 1 1 1 Interleukin-2 receptor subunit beta N-terminal domain 1 PKI PF02827.16 ORF69584 - 0.045 14.0 1.6 0.061 13.5 0.6 1.7 1 1 1 2 2 2 0 cAMP-dependent protein kinase inhibitor ZapA PF05164.13 ORF69584 - 0.072 13.5 0.6 0.082 13.4 0.6 1.2 1 0 0 1 1 1 0 Cell division protein ZapA DUF3405 PF11885.8 ORF69510 - 3.7 6.0 7.6 4.6 5.7 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) LPAM_2 PF13627.6 ORF68730 - 5.7e-09 35.6 4.4 7.2e-09 35.3 4.4 1.2 1 0 0 1 1 1 1 Prokaryotic lipoprotein-attachment site TEX33 PF15400.6 ORF68304 - 0.012 16.1 0.1 0.013 16.0 0.1 1.0 1 0 0 1 1 1 0 Testis-expressed sequence 33 protein family DUF4811 PF16069.5 ORF68120 - 0.078 12.9 0.1 0.082 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) RPAP2_Rtr1 PF04181.13 ORF68056 - 0.082 13.2 1.8 0.096 13.0 1.8 1.1 1 0 0 1 1 1 0 Rtr1/RPAP2 family Phospholamban PF04272.14 ORF68025 - 0.078 12.5 1.8 0.16 11.4 1.8 1.5 1 0 0 1 1 1 0 Phospholamban MlaC PF05494.12 ORF67971 - 0.041 13.6 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 MlaC protein DUF2443 PF10398.9 ORF67663 - 0.055 13.5 0.0 0.083 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) Flavi_NS1 PF00948.21 ORF67427 - 0.028 13.3 1.4 0.03 13.2 1.4 1.0 1 0 0 1 1 1 0 Flavivirus non-structural Protein NS1 Chordopox_L2 PF05803.12 ORF66937 - 0.08 12.8 0.1 0.092 12.6 0.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus L2 protein DUF167 PF02594.16 ORF66937 - 0.14 12.3 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised ACR, YggU family COG1872 DinB PF05163.12 ORF66848 - 0.01 15.8 0.1 0.014 15.3 0.1 1.2 1 0 0 1 1 1 0 DinB family DUF3377 PF11857.8 ORF66848 - 0.095 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) PXT1 PF15214.6 ORF66390 - 0.056 13.8 0.5 0.08 13.3 0.5 1.3 1 0 0 1 1 1 0 Peroxisomal testis-specific protein 1 TMEM132D_C PF15706.5 ORF65772 - 0.00042 20.0 0.2 0.00051 19.8 0.2 1.2 1 0 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Cyclin_C PF02984.19 ORF65772 - 0.0067 16.5 0.2 0.0067 16.5 0.2 1.1 1 0 0 1 1 1 1 Cyclin, C-terminal domain DUF2663 PF10864.8 ORF65690 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF3418 PF11898.8 ORF65669 - 3.5e-22 78.8 0.4 3.8e-22 78.7 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) DUF3734 PF12536.8 ORF65669 - 0.065 13.6 0.0 0.082 13.2 0.0 1.2 1 0 0 1 1 1 0 Patatin phospholipase HA2 PF04408.23 ORF65524 - 2e-05 24.9 0.0 2e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Helicase associated domain (HA2) Smg8_Smg9 PF10220.9 ORF65462 - 4.4 5.5 7.1 4.8 5.3 7.1 1.0 1 0 0 1 1 1 0 Smg8_Smg9 zf-C3HC4_5 PF17121.5 ORF65214 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF3449 PF11931.8 ORF64990 - 4.3e-19 69.0 0.2 4.7e-19 68.9 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3449) DUF2740 PF10872.8 ORF64990 - 0.14 12.1 1.9 0.48 10.3 1.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2740) Toxin_5 PF05294.13 ORF64734 - 0.0062 16.9 2.7 0.008 16.6 2.7 1.3 1 0 0 1 1 1 1 Scorpion short toxin Raf1_HTH PF18579.1 ORF63958 - 0.086 12.5 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 Rubisco accumulation factor 1 helix turn helix domain Phage_Capsid_P3 PF09018.11 ORF63835 - 0.17 10.6 0.0 0.2 10.4 0.0 1.1 1 0 0 1 1 1 0 P3 major capsid protein LRRCT PF01463.24 ORF63405 - 0.12 13.0 5.0 0.42 11.3 0.3 2.8 3 0 0 3 3 3 0 Leucine rich repeat C-terminal domain Phage-A118_gp45 PF10653.9 ORF63390 - 0.068 13.2 2.0 4.6 7.3 0.1 2.8 1 1 2 3 3 3 0 Protein gp45 of Bacteriophage A118 IBB PF01749.20 ORF63219 - 0.005 17.2 0.3 0.006 17.0 0.3 1.3 1 0 0 1 1 1 1 Importin beta binding domain DUF5427 PF10310.9 ORF62641 - 0.11 11.5 0.1 0.11 11.4 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5427) MFS_1 PF07690.16 ORF62510 - 2.3e-05 23.5 9.7 2.5e-05 23.4 9.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF62510 - 0.056 12.3 7.9 0.06 12.2 7.9 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter TPR_4 PF07721.14 ORF62220 - 0.019 15.5 0.5 0.037 14.7 0.5 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat PAP2 PF01569.21 ORF6202 - 1e-06 28.5 1.1 1.3e-06 28.2 1.1 1.1 1 0 0 1 1 1 1 PAP2 superfamily LD_cluster2 PF18163.1 ORF6202 - 0.22 11.0 0.1 0.26 10.8 0.1 1.1 1 0 0 1 1 1 0 SLOG cluster2 THF_DHG_CYH PF00763.23 ORF61931 - 9.4e-07 29.1 0.0 1.1e-06 28.9 0.0 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Methyltrn_RNA_3 PF02598.17 ORF61726 - 0.16 11.4 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Putative RNA methyltransferase YueH PF14166.6 ORF6137 - 0.083 12.8 0.1 0.088 12.7 0.1 1.1 1 0 0 1 1 1 0 YueH-like protein SET PF00856.28 ORF61171 - 3.9e-13 50.1 0.4 4.7e-13 49.9 0.4 1.1 1 0 0 1 1 1 1 SET domain 7TM_GPCR_Srd PF10317.9 ORF61035 - 0.02 14.1 0.1 0.022 13.9 0.1 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd DUF308 PF03729.13 ORF6041 - 0.0055 17.0 8.4 0.03 14.7 0.9 2.1 1 1 1 2 2 2 2 Short repeat of unknown function (DUF308) SPW PF03779.14 ORF6041 - 0.13 11.9 7.1 0.16 11.6 7.1 1.1 1 0 0 1 1 1 0 SPW repeat TPPK_C PF12555.8 ORF6041 - 1.1 9.4 6.8 1.6 8.8 0.2 2.2 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal ADP_ribosyl_GH PF03747.14 ORF60200 - 1.4e-07 31.5 0.0 1.5e-07 31.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase CTP_transf_like PF01467.26 ORF59884 - 9.3e-05 22.6 0.1 0.0002 21.5 0.0 1.6 2 0 0 2 2 2 1 Cytidylyltransferase-like NMT PF01233.19 ORF59519 - 0.076 12.9 0.4 0.077 12.8 0.4 1.1 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Ery_res_leader2 PF08057.11 ORF5951 - 0.11 12.9 0.7 0.4 11.2 0.2 2.2 2 0 0 2 2 2 0 Erythromycin resistance leader peptide DUF4006 PF13179.6 ORF59029 - 0.013 15.4 3.5 0.016 15.1 3.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF4006) SLC3A2_N PF16028.5 ORF59029 - 0.7 9.5 5.4 1 8.9 5.4 1.4 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus HemY_N PF07219.13 ORF59029 - 1 9.6 2.5 1.2 9.3 2.5 1.2 1 0 0 1 1 1 0 HemY protein N-terminus TMEM156 PF15106.6 ORF590 - 0.021 14.3 2.1 0.025 14.0 2.1 1.1 1 0 0 1 1 1 0 TMEM156 protein family Post_transc_reg PF13797.6 ORF58704 - 0.039 13.8 0.2 0.055 13.3 0.2 1.3 1 0 0 1 1 1 0 Post-transcriptional regulator DUF4920 PF16267.5 ORF58687 - 0.076 13.0 0.0 0.083 12.9 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4920) DUF4577 PF15145.6 ORF58409 - 0.15 12.1 3.8 0.16 12.0 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Shisa PF13908.6 ORF58409 - 1.9 8.7 3.7 2.2 8.5 3.7 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF2733 PF10813.8 ORF57796 - 9.8 6.0 7.3 7.4 6.4 4.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) LRR_6 PF13516.6 ORF57471 - 0.0025 17.7 1.1 0.48 10.6 0.1 2.6 2 0 0 2 2 2 2 Leucine Rich repeat Toxin_28 PF08115.11 ORF57219 - 0.11 12.4 1.5 0.15 12.0 1.5 1.1 1 0 0 1 1 1 0 SFI toxin family TipE PF16972.5 ORF57219 - 1.7 7.8 5.0 1.8 7.7 5.0 1.1 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE DUF667 PF05018.13 ORF56215 - 5.1e-25 88.3 0.1 5.5e-25 88.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) zf-C3HC4_5 PF17121.5 ORF56002 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Phage_holin_3_6 PF07332.11 ORF55966 - 0.083 12.9 1.6 0.083 12.9 1.6 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 ORF55966 - 0.66 8.7 2.2 0.64 8.7 2.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Bax1-I PF01027.20 ORF55966 - 6.6 6.5 10.5 7.6 6.3 10.5 1.0 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 CDC24 PF06395.11 ORF5538 - 0.062 13.6 0.3 0.07 13.4 0.3 1.1 1 0 0 1 1 1 0 CDC24 Calponin JSRP PF15312.6 ORF55192 - 0.051 13.5 0.6 0.24 11.4 0.6 1.9 1 1 0 1 1 1 0 Junctional sarcoplasmic reticulum protein MFS_1 PF07690.16 ORF55 - 1e-07 31.2 0.9 1e-07 31.2 0.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Peptidase_M9_N PF08453.10 ORF54851 - 0.071 12.8 0.0 0.075 12.7 0.0 1.0 1 0 0 1 1 1 0 Peptidase family M9 N-terminal DUF3511 PF12023.8 ORF54669 - 0.063 13.1 0.2 0.081 12.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3511) DUF2130 PF09903.9 ORF54669 - 0.07 12.4 0.1 0.11 11.8 0.1 1.4 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2130) TMEM208_SND2 PF05620.11 ORF54669 - 0.076 12.8 0.0 0.08 12.7 0.0 1.0 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 DUF1518 PF07469.12 ORF54371 - 0.027 14.9 4.2 0.39 11.2 4.2 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF1518) Blt1_C PF17183.4 ORF54135 - 0.033 13.8 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Get5 carboxyl domain Rep_fac-A_C PF08646.10 ORF5385 - 0.025 14.3 0.2 0.028 14.2 0.2 1.0 1 0 0 1 1 1 0 Replication factor-A C terminal domain YqzH PF14164.6 ORF53598 - 0.048 13.7 1.7 1.9 8.6 0.2 2.1 1 1 1 2 2 2 0 YqzH-like protein Hydrolase_6 PF13344.6 ORF53598 - 0.092 12.9 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase dsrm PF00035.26 ORF53496 - 0.12 13.1 0.1 0.17 12.6 0.1 1.3 1 0 0 1 1 1 0 Double-stranded RNA binding motif Peptidase_M17 PF00883.21 ORF53404 - 1.9e-14 53.7 0.0 2e-14 53.6 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain dsrm PF00035.26 ORF51890 - 0.12 13.1 0.1 0.17 12.6 0.1 1.3 1 0 0 1 1 1 0 Double-stranded RNA binding motif DUF2576 PF10845.8 ORF5162 - 0.1 12.3 0.3 0.16 11.6 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) CPT_N PF16484.5 ORF51550 - 0.058 13.4 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 Carnitine O-palmitoyltransferase N-terminus SpvD PF05563.12 ORF51223 - 0.13 11.9 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Salmonella plasmid virulence protein SpvD DUF4157 PF13699.6 ORF5094 - 0.062 13.5 0.2 0.062 13.5 0.2 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4157) Ank_2 PF12796.7 ORF50567 - 7.5e-12 45.7 0.1 8.1e-12 45.6 0.1 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF50567 - 1.4e-11 44.7 0.6 5.9e-06 26.7 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF50567 - 1.8e-10 40.8 0.3 2.2e-10 40.6 0.3 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF50567 - 1.9e-09 36.9 0.2 4.5e-05 23.5 0.1 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF50567 - 2.3e-09 37.3 0.3 7.8e-05 23.0 0.3 3.0 3 0 0 3 3 3 2 Ankyrin repeat YhdB PF14148.6 ORF50548 - 0.049 13.7 0.0 0.069 13.3 0.0 1.3 1 1 0 1 1 1 0 YhdB-like protein DUF2663 PF10864.8 ORF50468 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) SSI PF00720.17 ORF49227 - 0.015 15.2 1.1 0.017 15.1 1.1 1.1 1 0 0 1 1 1 0 Subtilisin inhibitor-like zinc_ribbon_2 PF13240.6 ORF48645 - 0.0011 18.6 1.3 0.0016 18.1 0.7 1.5 2 0 0 2 2 2 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF48645 - 0.015 14.7 2.0 0.015 14.7 2.0 2.0 2 1 0 2 2 2 0 zinc-ribbon domain zf-BED PF02892.15 ORF48645 - 0.034 14.2 1.3 0.052 13.6 1.3 1.3 1 0 0 1 1 1 0 BED zinc finger DZR PF12773.7 ORF48645 - 0.038 14.0 3.7 0.068 13.2 3.7 1.4 1 1 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 ORF48645 - 0.12 12.4 1.5 0.14 12.2 1.5 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C3HC4_3 PF13920.6 ORF48645 - 0.14 12.0 5.4 0.079 12.8 3.0 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-FCS PF06467.14 ORF48645 - 0.49 10.4 6.2 1.7 8.7 1.0 2.3 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Cad PF03596.13 ORF48418 - 0.066 13.1 2.1 0.075 12.9 2.1 1.1 1 0 0 1 1 1 0 Cadmium resistance transporter Pkinase PF00069.25 ORF48387 - 9.3e-24 84.2 0.0 1e-23 84.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF48387 - 3.2e-11 43.0 0.0 3.4e-11 42.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF48387 - 4.8e-05 22.5 0.0 4.8e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF48387 - 0.0024 17.8 0.0 0.0024 17.8 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family SBBP PF06739.11 ORF48387 - 0.067 13.2 0.0 0.098 12.7 0.0 1.3 1 0 0 1 1 1 0 Beta-propeller repeat Seadorna_VP7 PF07387.11 ORF48387 - 0.12 11.4 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Choline_kinase PF01633.20 ORF48387 - 0.24 11.0 0.0 0.29 10.7 0.0 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase FIIND PF13553.6 ORF48209 - 0.0059 16.0 0.3 0.0059 16.0 0.3 1.0 1 0 0 1 1 1 1 Function to find HR_lesion PF05514.11 ORF48115 - 3e-05 24.2 2.1 3.3e-05 24.1 2.1 1.1 1 0 0 1 1 1 1 HR-like lesion-inducing DUF4147 PF13660.6 ORF47827 - 0.17 11.4 0.4 0.18 11.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4147) RIX1 PF08167.12 ORF47423 - 0.03 14.1 0.1 0.032 14.0 0.1 1.0 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis Ntox43 PF15537.6 ORF47373 - 0.036 14.1 0.0 0.039 14.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial toxin 43 EPF PF17181.4 ORF4582 - 0.045 13.7 2.7 0.077 13.0 2.7 1.6 1 1 0 1 1 1 0 Epidermal patterning factor proteins Oxidoreduct_C PF16490.5 ORF45757 - 0.17 11.6 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain Aa_trans PF01490.18 ORF45130 - 2e-05 23.5 5.2 2e-05 23.5 5.2 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein MARVEL PF01284.23 ORF45130 - 0.03 14.4 4.2 0.036 14.1 4.2 1.2 1 1 0 1 1 1 0 Membrane-associating domain TauE PF01925.19 ORF44973 - 2.2e-06 27.5 5.3 2.4e-06 27.4 5.3 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Plasmodium_HRP PF05403.11 ORF44475 - 0.0047 16.8 1.8 0.0049 16.7 1.8 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF44475 - 0.051 13.5 6.3 1 9.4 0.6 2.2 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain LAGLIDADG_WhiA PF14527.6 ORF44475 - 4.6 7.4 10.2 7.2 6.8 1.9 2.2 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain DUF4375 PF14300.6 ORF44475 - 9.2 6.6 7.7 31 4.8 6.5 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4375) DUF2663 PF10864.8 ORF43297 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) RRS1 PF04939.12 ORF42170 - 0.2 11.5 0.0 0.23 11.3 0.0 1.0 1 0 0 1 1 1 0 Ribosome biogenesis regulatory protein (RRS1) zf-RanBP PF00641.18 ORF4198 - 3.1 7.2 8.0 0.27 10.6 3.7 1.6 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others PD-C2-AF1 PF09310.10 ORF41871 - 0.11 11.9 0.0 0.28 10.5 0.0 1.5 1 1 1 2 2 2 0 POU domain, class 2, associating factor 1 Peptidase_G2 PF11962.8 ORF41858 - 0.044 13.2 0.1 0.047 13.1 0.1 1.0 1 0 0 1 1 1 0 Peptidase_G2, IMC autoproteolytic cleavage domain Acetyltransf_18 PF18014.1 ORF41747 - 0.029 14.2 0.1 0.033 14.0 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Neuralized PF07177.12 ORF41561 - 0.1 12.6 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Neuralized Pkinase PF00069.25 ORF41430 - 1.2e-09 38.0 0.0 1.2e-09 38.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41430 - 0.0035 16.7 0.0 0.0035 16.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase 3H PF02829.14 ORF41265 - 0.068 13.5 0.5 0.075 13.3 0.5 1.1 1 0 0 1 1 1 0 3H domain KapB PF08810.10 ORF41265 - 0.13 12.4 0.1 0.22 11.7 0.1 1.5 1 1 1 2 2 2 0 Kinase associated protein B zf-RING_UBOX PF13445.6 ORF41104 - 3.7e-10 39.7 4.3 4.8e-10 39.3 4.3 1.2 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF41104 - 2.1e-09 37.1 4.2 2.8e-09 36.7 4.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF41104 - 4.2e-09 36.1 3.8 5.4e-09 35.8 3.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF41104 - 9.6e-07 29.0 4.8 1.2e-06 28.7 4.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF41104 - 3.8e-06 26.7 3.3 5.2e-06 26.3 3.3 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF41104 - 1.4e-05 24.9 3.3 1.8e-05 24.5 3.3 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 ORF41104 - 1.5e-05 24.8 0.6 1.9e-05 24.5 0.6 1.2 1 0 0 1 1 1 1 zf-RING of BARD1-type protein Prok-RING_4 PF14447.6 ORF41104 - 7.5e-05 22.5 3.6 0.00011 22.0 3.6 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF41104 - 7.9e-05 22.7 5.4 0.00011 22.3 5.4 1.2 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-Nse PF11789.8 ORF41104 - 0.0065 16.3 0.6 0.008 16.0 0.6 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-rbx1 PF12678.7 ORF41104 - 0.027 14.8 4.8 0.05 13.9 4.8 1.5 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF41104 - 0.46 10.3 9.3 0.98 9.2 9.3 1.6 1 1 0 1 1 1 0 RING-like zinc finger Renin_r PF07850.14 ORF41069 - 1.3 9.6 7.0 1.6 9.4 7.0 1.1 1 0 0 1 1 1 0 Renin receptor-like protein Glyco_hydro_42M PF08532.10 ORF40850 - 0.28 10.7 0.0 0.29 10.6 0.0 1.0 1 0 0 1 1 1 0 Beta-galactosidase trimerisation domain SopD PF11047.8 ORF4082 - 0.054 12.7 0.0 0.064 12.4 0.0 1.0 1 0 0 1 1 1 0 Salmonella outer protein D DUF4577 PF15145.6 ORF40409 - 0.4 10.7 1.7 0.4 10.7 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) FIIND PF13553.6 ORF39691 - 0.0059 16.0 0.3 0.0059 16.0 0.3 1.0 1 0 0 1 1 1 1 Function to find Rnf-Nqr PF02508.14 ORF38443 - 0.031 14.3 5.3 0.032 14.2 5.3 1.0 1 0 0 1 1 1 0 Rnf-Nqr subunit, membrane protein DUF1700 PF08006.11 ORF38443 - 0.07 12.7 3.6 0.081 12.5 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Vpu PF00558.19 ORF38443 - 9.7 6.0 9.4 6.8 6.5 1.2 2.0 1 1 1 2 2 2 0 Vpu protein CDP-OH_P_tran_2 PF08009.11 ORF38422 - 0.079 12.9 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase 2 PRY PF13765.6 ORF38213 - 0.15 11.7 0.4 0.29 10.8 0.4 1.4 1 0 0 1 1 1 0 SPRY-associated domain OppC_N PF12911.7 ORF38079 - 0.049 13.6 0.0 0.25 11.4 0.0 1.9 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C MlaC PF05494.12 ORF37319 - 0.041 13.6 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 MlaC protein LRR_6 PF13516.6 ORF37315 - 1.5e-05 24.6 0.0 0.0027 17.6 0.0 2.2 2 0 0 2 2 2 2 Leucine Rich repeat DUF4156 PF13698.6 ORF36091 - 0.03 14.6 0.5 0.032 14.6 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) DUF3726 PF12525.8 ORF36091 - 0.13 12.4 0.1 0.26 11.4 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3726) PCMT PF01135.19 ORF35716 - 0.13 12.0 0.0 0.14 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Tudor_4 PF18358.1 ORF34956 - 0.00051 19.6 0.1 0.00099 18.7 0.1 1.4 1 0 0 1 1 1 1 Histone methyltransferase Tudor domain MBT PF02820.18 ORF34956 - 0.0014 18.9 0.1 0.0028 18.0 0.0 1.4 1 1 1 2 2 2 1 mbt repeat Tudor-knot PF11717.8 ORF34956 - 0.0037 17.1 0.1 0.033 14.1 0.0 2.3 1 1 0 1 1 1 1 RNA binding activity-knot of a chromodomain SAWADEE PF16719.5 ORF34956 - 0.0065 16.5 0.0 0.0069 16.4 0.0 1.1 1 0 0 1 1 1 1 SAWADEE domain DUF5634_N PF18672.1 ORF34956 - 0.0092 15.7 0.0 0.011 15.4 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5634) Med14 PF08638.11 ORF34922 - 0.12 11.8 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit MED14 Molybdop_Fe4S4 PF04879.16 ORF34610 - 0.064 13.3 1.3 0.12 12.4 1.3 1.6 1 1 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain FIVAR PF07554.13 ORF34582 - 0.096 13.5 0.1 0.16 12.8 0.1 1.4 1 0 0 1 1 1 0 FIVAR domain Opacity PF02462.15 ORF3441 - 0.17 12.0 0.1 0.21 11.7 0.1 1.0 1 0 0 1 1 1 0 Opacity family porin protein RNase_HII PF01351.18 ORF339 - 0.2 11.4 1.5 0.2 11.5 1.5 1.0 1 0 0 1 1 1 0 Ribonuclease HII DUF1842 PF08896.10 ORF33755 - 0.1 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1842) DM13 PF10517.9 ORF33640 - 0.079 13.6 0.1 0.087 13.4 0.1 1.1 1 0 0 1 1 1 0 Electron transfer DM13 zf-LITAF-like PF10601.9 ORF32903 - 0.00016 21.8 3.9 0.0002 21.6 3.9 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF4187 PF13821.6 ORF32903 - 0.039 13.7 0.9 0.051 13.4 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) NS3_envE PF02723.14 ORF32903 - 0.58 10.3 8.1 0.85 9.7 8.1 1.3 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Wzy_C PF04932.15 ORF32707 - 1.1 8.9 3.1 1.2 8.7 3.1 1.1 1 0 0 1 1 1 0 O-Antigen ligase Bee_toxin PF17454.2 ORF32707 - 1.4 9.0 4.7 2.8 8.0 0.7 2.1 2 0 0 2 2 2 0 Honey bee toxin Ribosomal_S25 PF03297.15 ORF32608 - 1.1e-20 73.7 3.6 1.2e-20 73.6 3.6 1.0 1 0 0 1 1 1 1 S25 ribosomal protein Fn3-like PF14310.6 ORF32566 - 0.098 12.8 0.2 0.14 12.2 0.2 1.3 1 0 0 1 1 1 0 Fibronectin type III-like domain Longin_2 PF18639.1 ORF3220 - 0.12 12.2 2.3 0.12 12.2 2.3 1.1 1 0 0 1 1 1 0 Yeast longin domain DUF1990 PF09348.10 ORF31891 - 0.0098 16.0 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1990) DUF2512 PF10710.9 ORF31818 - 0.0063 16.2 6.8 0.0069 16.0 6.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2512) LSM PF01423.22 ORF31607 - 7.3e-15 54.4 0.0 8.1e-15 54.3 0.0 1.1 1 0 0 1 1 1 1 LSM domain ApbE PF02424.15 ORF31020 - 0.088 12.3 0.3 0.09 12.3 0.3 1.0 1 0 0 1 1 1 0 ApbE family EF-hand_1 PF00036.32 ORF31016 - 0.025 14.1 0.0 0.045 13.3 0.0 1.5 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF31016 - 0.046 13.7 0.0 0.072 13.1 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain Ank_2 PF12796.7 ORF30963 - 2.7e-06 27.9 0.0 3e-06 27.7 0.0 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF30963 - 0.00085 19.6 0.0 0.2 12.3 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 ORF30963 - 0.044 14.3 0.0 12 6.6 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat SNARE_assoc PF09335.11 ORF30890 - 0.00022 21.7 1.1 0.00024 21.6 1.1 1.1 1 0 0 1 1 1 1 SNARE associated Golgi protein Neurensin PF14927.6 ORF30890 - 0.1 12.3 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Neurensin DUF4342 PF14242.6 ORF30716 - 0.021 14.8 0.3 0.026 14.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) RsgA_N PF16745.5 ORF30432 - 0.15 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 RsgA N-terminal domain PITH PF06201.13 ORF30289 - 0.00058 20.1 0.0 0.00059 20.1 0.0 1.0 1 0 0 1 1 1 1 PITH domain cNMP_binding PF00027.29 ORF30158 - 0.00024 21.1 0.0 0.0003 20.8 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Plasmid_parti PF01672.16 ORF29708 - 0.096 13.3 1.4 0.11 13.1 1.4 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein CENP-T_C PF15511.6 ORF29207 - 0.012 15.7 0.0 0.015 15.4 0.0 1.2 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold MttA_Hcf106 PF02416.16 ORF29130 - 1.9e-12 46.3 0.2 2.1e-12 46.1 0.2 1.1 1 0 0 1 1 1 1 mttA/Hcf106 family Pelovaterin PF17859.1 ORF28971 - 6.4 7.1 12.3 0.28 11.5 3.6 2.6 1 1 1 2 2 2 0 Pelovaterin Peptidase_M14 PF00246.24 ORF28835 - 0.00066 19.6 0.0 0.00068 19.5 0.0 1.0 1 0 0 1 1 1 1 Zinc carboxypeptidase DUF5527 PF17665.1 ORF28153 - 0.0054 16.3 0.0 0.0066 16.0 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) SspB PF04386.13 ORF28153 - 0.019 14.8 0.0 0.021 14.7 0.0 1.0 1 0 0 1 1 1 0 Stringent starvation protein B Headcase PF16002.5 ORF27986 - 0.034 13.6 0.3 0.042 13.3 0.3 1.0 1 0 0 1 1 1 0 Headcase protein Reticulon PF02453.17 ORF27415 - 0.025 14.6 0.5 0.028 14.4 0.5 1.0 1 0 0 1 1 1 0 Reticulon Hen1_Lam_C PF18441.1 ORF27368 - 0.083 12.7 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Hen1 La-motif C-terminal domain TMEM171 PF15471.6 ORF26977 - 2.5 7.0 6.7 2.8 6.9 6.7 1.0 1 0 0 1 1 1 0 Transmembrane protein family 171 DPBB_1 PF03330.18 ORF26968 - 0.13 12.5 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Lytic transglycolase DUF1282 PF06930.12 ORF26824 - 0.069 12.9 0.6 0.073 12.8 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1282) Chlam_vir PF05475.11 ORF26545 - 0.095 12.4 0.3 0.09 12.5 0.3 1.1 1 0 0 1 1 1 0 Pgp3 C-terminal domain Comm PF15957.5 ORF26545 - 0.94 9.8 4.9 1.1 9.6 4.9 1.1 1 0 0 1 1 1 0 Commissureless IRS PF02174.17 ORF2653 - 0.047 13.6 0.1 0.053 13.4 0.1 1.1 1 0 0 1 1 1 0 PTB domain (IRS-1 type) SnoaL_3 PF13474.6 ORF2653 - 0.086 13.1 0.3 0.11 12.8 0.3 1.2 1 0 0 1 1 1 0 SnoaL-like domain Rbx_binding PF18113.1 ORF26284 - 0.12 12.1 1.4 0.37 10.6 0.7 1.9 2 0 0 2 2 2 0 Rubredoxin binding C-terminal domain ADP_ribosyl_GH PF03747.14 ORF26275 - 1.4e-07 31.5 0.0 1.5e-07 31.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase zf-C3HC4_5 PF17121.5 ORF26078 - 0.036 13.9 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) TLC PF03219.14 ORF25958 - 0.012 14.4 2.1 0.014 14.2 2.1 1.0 1 0 0 1 1 1 0 TLC ATP/ADP transporter PadR PF03551.14 ORF25958 - 0.03 14.3 0.0 0.034 14.1 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family VPDSG-CTERM PF18205.1 ORF25828 - 6.5 6.7 6.6 13 5.7 6.6 1.6 1 0 0 1 1 1 0 VPDSG-CTERM motif DUF2663 PF10864.8 ORF25350 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Ras PF00071.22 ORF25085 - 0.00013 21.6 0.3 0.0003 20.4 0.1 1.7 2 0 0 2 2 2 1 Ras family CPP1-like PF11833.8 ORF25085 - 0.14 11.8 0.2 0.15 11.7 0.2 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like MetW PF07021.12 ORF25022 - 0.072 12.7 0.0 0.083 12.5 0.0 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Skp1_POZ PF03931.15 ORF24662 - 0.028 14.6 0.0 0.04 14.1 0.0 1.2 1 0 0 1 1 1 0 Skp1 family, tetramerisation domain NS3 PF17530.2 ORF24466 - 0.063 12.8 0.0 0.072 12.7 0.0 1.1 1 0 0 1 1 1 0 Non-structural protein NS3 SSP160 PF06933.11 ORF24335 - 9.2 4.3 9.8 9.9 4.2 9.8 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 OAD_gamma PF04277.13 ORF24307 - 0.49 11.0 1.7 0.74 10.4 1.7 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Mt_ATP-synt_B PF05405.14 ORF24307 - 0.7 9.5 3.6 0.88 9.2 3.6 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF5601 PF18151.1 ORF23099 - 0.011 16.1 0.5 0.021 15.1 0.5 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5601) CheR PF01739.18 ORF23099 - 0.021 14.3 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 CheR methyltransferase, SAM binding domain Rep_2 PF01719.17 ORF23099 - 0.042 13.6 0.3 0.046 13.5 0.3 1.1 1 0 0 1 1 1 0 Plasmid replication protein DUF1658 PF07871.11 ORF21661 - 0.0065 16.3 1.4 0.0082 16.0 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1658) DUF751 PF05421.11 ORF21408 - 0.058 14.1 0.5 0.058 14.1 0.5 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF751) COX15-CtaA PF02628.15 ORF21121 - 0.069 12.2 0.0 0.069 12.2 0.0 1.0 1 0 0 1 1 1 0 Cytochrome oxidase assembly protein DUF3748 PF12566.8 ORF20627 - 0.097 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3748) DUF667 PF05018.13 ORF20404 - 5.1e-25 88.3 0.1 5.5e-25 88.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) RsgA_N PF16745.5 ORF20392 - 0.15 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 RsgA N-terminal domain K_oxygenase PF13434.6 ORF20182 - 0.039 13.1 0.0 0.042 13.0 0.0 1.0 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) DUF2663 PF10864.8 ORF20036 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF3368 PF11848.8 ORF19979 - 0.037 13.8 0.1 0.09 12.6 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3368) DUF3327 PF11806.8 ORF19876 - 0.033 14.9 0.3 0.04 14.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3327) MORN PF02493.20 ORF19469 - 7.5e-09 35.0 3.5 0.00044 20.0 0.9 2.3 2 0 0 2 2 2 2 MORN repeat SM-ATX PF14438.6 ORF19469 - 0.038 14.1 0.3 1.4 9.1 0.1 2.6 1 1 2 3 3 3 0 Ataxin 2 SM domain GPDPase_memb PF10110.9 ORF19150 - 0.16 10.7 0.1 0.18 10.5 0.1 1.0 1 0 0 1 1 1 0 Membrane domain of glycerophosphoryl diester phosphodiesterase zf-RING_4 PF14570.6 ORF18995 - 0.065 13.0 0.0 0.097 12.5 0.0 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF5560 PF17715.1 ORF18897 - 0.061 12.8 5.7 0.066 12.7 5.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) C1_2 PF03107.16 ORF17855 - 0.031 14.6 0.9 1.5 9.2 0.0 2.3 2 0 0 2 2 2 0 C1 domain DUF1382 PF07131.11 ORF17049 - 0.0071 16.3 0.2 0.012 15.6 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1382) Med16 PF11635.8 ORF16720 - 0.027 12.4 0.5 0.027 12.4 0.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 DUF1631 PF07793.11 ORF16720 - 0.05 12.0 0.4 0.055 11.9 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) HTH_Tnp_Tc3_1 PF11427.8 ORF16040 - 0.24 11.3 1.6 0.34 10.8 1.6 1.2 1 0 0 1 1 1 0 Tc3 transposase Pkinase PF00069.25 ORF16037 - 6.1e-08 32.4 0.0 7.1e-08 32.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain BES1_N PF05687.13 ORF15886 - 1.9 8.8 5.3 2.2 8.7 5.3 1.0 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal ABC_tran PF00005.27 ORF15769 - 0.086 13.4 0.1 0.094 13.2 0.1 1.0 1 0 0 1 1 1 0 ABC transporter UNC119_bdg PF15435.6 ORF1569 - 0.059 12.9 0.2 0.062 12.8 0.2 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue KIX_2 PF16987.5 ORF15322 - 0.05 13.6 0.1 0.064 13.3 0.1 1.2 1 0 0 1 1 1 0 KIX domain LacI PF00356.21 ORF15322 - 0.68 9.8 2.8 25 4.8 0.1 2.5 2 1 0 2 2 2 0 Bacterial regulatory proteins, lacI family ZapB PF06005.12 ORF14967 - 0.016 15.6 0.2 0.018 15.4 0.2 1.0 1 0 0 1 1 1 0 Cell division protein ZapB Cep57_MT_bd PF06657.13 ORF14967 - 0.028 14.9 1.4 0.04 14.4 1.4 1.4 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 PilN_bio_d PF18222.1 ORF14967 - 0.092 13.1 0.1 0.099 13.0 0.1 1.1 1 0 0 1 1 1 0 PilN biogenesis protein dimerization domain MazG_C PF18722.1 ORF1481 - 0.17 11.4 0.1 0.17 11.4 0.1 1.1 1 0 0 1 1 1 0 MazG C-terminal domain Ribosomal_S27 PF01599.19 ORF1393 - 0.056 13.6 0.1 0.081 13.1 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S27a Zn_ribbon_recom PF13408.6 ORF13838 - 0.065 13.8 1.9 0.077 13.5 1.9 1.2 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain DUF4722 PF15849.5 ORF13545 - 0.036 13.8 3.3 0.038 13.7 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4722) DUF2475 PF10629.9 ORF13152 - 0.048 13.9 0.4 0.059 13.6 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2475) DUF1658 PF07871.11 ORF13137 - 0.4 10.7 2.9 4.5 7.4 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) DUF842 PF05811.13 ORF13052 - 0.046 13.4 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) 7kD_DNA_binding PF02294.18 ORF12986 - 0.19 11.8 0.1 0.35 10.9 0.0 1.5 1 1 1 2 2 2 0 7kD DNA-binding domain Holin_9 PF16936.5 ORF12930 - 0.055 13.6 0.0 0.065 13.4 0.0 1.1 1 0 0 1 1 1 0 Putative holin zf_C2H2_6 PF18450.1 ORF12916 - 0.13 12.0 0.7 0.33 10.7 0.7 1.8 1 0 0 1 1 1 0 Zinc Finger domain DUF2663 PF10864.8 ORF12665 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Ntox43 PF15537.6 ORF12253 - 0.036 14.1 0.0 0.039 14.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial toxin 43 MazG_C PF18722.1 ORF1224 - 0.17 11.4 0.1 0.17 11.4 0.1 1.1 1 0 0 1 1 1 0 MazG C-terminal domain DM13 PF10517.9 ORF11613 - 0.079 13.6 0.1 0.087 13.4 0.1 1.1 1 0 0 1 1 1 0 Electron transfer DM13 PTN_MK_N PF05196.13 ORF11495 - 0.14 12.3 2.4 0.13 12.5 1.2 1.6 2 0 0 2 2 2 0 PTN/MK heparin-binding protein family, N-terminal domain Ras PF00071.22 ORF11374 - 0.0046 16.6 0.0 0.0059 16.2 0.0 1.2 1 0 0 1 1 1 1 Ras family Pkinase PF00069.25 ORF112560 - 2.4e-10 40.2 0.3 2.6e-10 40.1 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF112560 - 0.00037 19.9 0.1 0.0004 19.8 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks372.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks372.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks372.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks372.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RPS31 PF17067.5 ORF112018 - 0.2 11.9 3.4 0.24 11.6 3.4 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e Tropomyosin_1 PF12718.7 ORF111731 - 0.072 13.2 0.1 0.079 13.1 0.1 1.1 1 0 0 1 1 1 0 Tropomyosin like Pox_polyA_pol_N PF12630.7 ORF111731 - 0.15 12.5 0.3 0.22 11.9 0.3 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain Rhodanese PF00581.20 ORF111653 - 5.5e-09 36.5 0.4 5.9e-09 36.4 0.4 1.1 1 0 0 1 1 1 1 Rhodanese-like domain Kinesin PF00225.23 ORF111167 - 3.8e-14 52.4 0.1 3.9e-14 52.3 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF111167 - 7.3e-09 35.7 0.1 7.5e-09 35.7 0.1 1.1 1 0 0 1 1 1 1 Microtubule binding Cad PF03596.13 ORF110978 - 0.066 13.1 2.1 0.075 12.9 2.1 1.1 1 0 0 1 1 1 0 Cadmium resistance transporter DUF3511 PF12023.8 ORF110517 - 0.063 13.1 0.2 0.081 12.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3511) DUF2130 PF09903.9 ORF110517 - 0.07 12.4 0.1 0.11 11.8 0.1 1.4 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2130) TMEM208_SND2 PF05620.11 ORF110517 - 0.076 12.8 0.0 0.08 12.7 0.0 1.0 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 EF-hand_6 PF13405.6 ORF110479 - 1.3e-05 24.8 0.0 2.2e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF110479 - 3.2e-05 23.2 0.0 4.4e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF110479 - 0.013 15.9 0.0 0.014 15.8 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_10 PF14788.6 ORF110479 - 0.095 12.6 0.5 0.17 11.7 0.5 1.5 1 1 0 1 1 1 0 EF hand Glycophorin_A PF01102.18 ORF110359 - 0.57 10.4 2.3 0.67 10.2 2.3 1.2 1 0 0 1 1 1 0 Glycophorin A DUF2663 PF10864.8 ORF109682 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Potass_KdpF PF09604.10 ORF109620 - 6.2e-05 22.9 6.0 0.00014 21.8 6.0 1.7 1 0 0 1 1 1 1 F subunit of K+-transporting ATPase (Potass_KdpF) HemY_N PF07219.13 ORF109620 - 0.84 9.9 3.5 0.65 10.2 1.3 1.7 2 0 0 2 2 2 0 HemY protein N-terminus DUF4589 PF15252.6 ORF109164 - 0.33 10.9 2.8 0.33 10.9 2.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) DOT1 PF08123.13 ORF109134 - 2.6e-07 30.4 0.0 2.7e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 Histone methylation protein DOT1 GidB PF02527.15 ORF109134 - 0.013 14.8 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Acyl-CoA_ox_N PF14749.6 ORF10908 - 0.00016 22.2 0.3 0.00017 22.1 0.3 1.1 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal HipN PF18253.1 ORF10908 - 0.054 13.2 1.0 0.068 12.9 0.1 1.7 1 1 1 2 2 2 0 Hsp70-interacting protein N N-terminal domain Ntox1 PF15500.6 ORF108945 - 0.056 13.8 0.0 0.069 13.5 0.0 1.2 1 0 0 1 1 1 0 Putative RNase-like toxin, toxin_1 POM121 PF15229.6 ORF107637 - 0.098 12.3 0.6 0.11 12.1 0.6 1.0 1 0 0 1 1 1 0 POM121 family BBIP10 PF14777.6 ORF107414 - 5.7e-24 83.5 2.3 6e-24 83.4 2.3 1.0 1 0 0 1 1 1 1 Cilia BBSome complex subunit 10 NHR2 PF08788.11 ORF10732 - 0.044 13.5 0.4 0.087 12.6 0.2 1.6 1 1 0 1 1 1 0 NHR2 domain like CENP-T_C PF15511.6 ORF106507 - 0.012 15.7 0.0 0.015 15.4 0.0 1.2 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold pP_pnuc_2 PF18166.1 ORF10643 - 0.015 15.4 0.3 0.015 15.3 0.3 1.1 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease ANAPC8 PF04049.13 ORF10643 - 0.064 13.3 1.0 0.067 13.2 1.0 1.1 1 0 0 1 1 1 0 Anaphase promoting complex subunit 8 / Cdc23 Tam41_Mmp37 PF09139.11 ORF105977 - 0.021 14.3 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 Phosphatidate cytidylyltransferase, mitochondrial DUF1143 PF06608.11 ORF105972 - 0.018 15.1 0.1 0.019 15.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) CAML PF14963.6 ORF105706 - 0.13 12.3 0.4 0.16 12.1 0.4 1.0 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand 7TM_GPCR_Sri PF10327.9 ORF105265 - 0.045 12.9 2.9 0.055 12.6 2.9 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sri p450 PF00067.22 ORF105259 - 2.9e-07 29.6 0.0 2.9e-07 29.6 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF2663 PF10864.8 ORF104895 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) MFS_1 PF07690.16 ORF104806 - 2.3e-05 23.5 9.7 2.5e-05 23.4 9.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF104806 - 0.056 12.3 7.9 0.06 12.2 7.9 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter Kelch_1 PF01344.25 ORF104240 - 6.1e-12 44.9 0.0 8.9e-07 28.4 0.0 2.0 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF104240 - 8.6e-11 41.7 0.7 9.1e-05 22.4 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF104240 - 3.1e-09 36.4 0.2 0.00039 20.3 0.0 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF104240 - 7.7e-09 35.4 0.8 7.8e-06 25.8 0.1 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF104240 - 1e-07 31.9 0.3 0.0031 17.7 0.2 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 ORF104240 - 2e-07 31.1 0.1 0.011 16.0 0.4 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Synaptobrevin PF00957.21 ORF104159 - 8.1e-12 44.8 6.6 8.7e-12 44.7 6.6 1.0 1 0 0 1 1 1 1 Synaptobrevin Fzo_mitofusin PF04799.13 ORF104159 - 0.019 14.5 1.4 0.02 14.4 1.4 1.1 1 0 0 1 1 1 0 fzo-like conserved region I_LWEQ PF01608.17 ORF104159 - 0.029 14.6 0.4 0.032 14.5 0.4 1.1 1 0 0 1 1 1 0 I/LWEQ domain Mito_carr PF00153.27 ORF103757 - 1.4e-09 37.8 0.0 1.6e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF4271 PF14093.6 ORF103653 - 0.042 13.8 1.1 0.042 13.8 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) TPR_11 PF13414.6 ORF102354 - 0.0028 17.3 0.0 0.0044 16.7 0.0 1.3 1 0 0 1 1 1 1 TPR repeat TPR_2 PF07719.17 ORF102354 - 0.054 13.6 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF1048 PF06304.11 ORF102354 - 0.11 13.0 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1048) Ras PF00071.22 ORF102333 - 5.6e-11 42.3 0.0 6e-11 42.2 0.0 1.0 1 0 0 1 1 1 1 Ras family DUF3899 PF13038.6 ORF102090 - 0.028 14.9 2.9 0.046 14.2 2.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3899) Phage_tail_APC PF16778.5 ORF101571 - 0.17 11.8 0.1 0.23 11.3 0.1 1.4 1 1 0 1 1 1 0 Phage tail assembly chaperone protein zf-LITAF-like PF10601.9 ORF101320 - 0.00016 21.8 3.9 0.0002 21.6 3.9 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF4187 PF13821.6 ORF101320 - 0.039 13.7 0.9 0.051 13.4 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) NS3_envE PF02723.14 ORF101320 - 0.58 10.3 8.1 0.85 9.7 8.1 1.3 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E zf-RING_11 PF17123.5 ORF101285 - 6.4e-09 35.4 3.9 8.8e-09 35.0 3.9 1.2 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF101285 - 5e-06 26.7 1.8 6.9e-06 26.3 1.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF101285 - 0.0014 18.5 3.0 0.0021 18.0 3.0 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Vps39_2 PF10367.9 ORF101285 - 0.0023 18.3 0.1 0.0025 18.2 0.1 1.1 1 0 0 1 1 1 1 Vacuolar sorting protein 39 domain 2 zf-C3HC4_3 PF13920.6 ORF101285 - 0.0025 17.7 0.7 0.0034 17.2 0.7 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF101285 - 0.005 16.6 2.2 0.0072 16.1 2.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF101285 - 0.012 15.7 3.5 0.02 14.9 3.5 1.4 1 0 0 1 1 1 0 RING-type zinc-finger DHC PF09626.10 ORF101285 - 0.032 15.1 0.0 0.034 15.0 0.0 1.1 1 0 0 1 1 1 0 Dihaem cytochrome c Prok-RING_4 PF14447.6 ORF101285 - 0.037 13.9 1.1 0.3 11.0 1.6 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF101285 - 0.041 13.8 1.6 0.064 13.1 1.6 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF2175 PF09943.9 ORF101285 - 0.26 11.6 2.3 0.31 11.4 0.5 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) zf-rbx1 PF12678.7 ORF101285 - 2.7 8.4 7.5 57 4.1 7.5 2.2 1 1 0 1 1 1 0 RING-H2 zinc finger domain Csm1 PF12539.8 ORF100388 - 0.049 14.3 0.4 0.06 14.0 0.4 1.1 1 0 0 1 1 1 0 Chromosome segregation protein Csm1/Pcs1 PTR PF12789.7 ORF100388 - 0.14 12.3 2.2 0.23 11.6 1.2 1.8 1 1 1 2 2 2 0 Phage tail repeat like Snapin_Pallidin PF14712.6 ORF10029 - 0.00083 19.7 2.2 0.21 12.0 0.7 2.1 1 1 1 2 2 2 2 Snapin/Pallidin SIC PF03482.13 NODE_80981_length_196_cov_0.906832_g73040_i0forward_frame_1 - 0.22 11.8 0.0 0.3 11.3 0.0 1.1 1 0 0 1 1 1 0 sic protein repeat Exonuc_VII_L PF02601.15 NODE_80972_length_196_cov_0.962733_g73031_i0reverse_frame_1 - 0.055 13.0 0.0 0.056 13.0 0.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Sec23_helical PF04815.15 NODE_80971_length_196_cov_0.975155_g73030_i0reverse_frame_1 - 0.062 13.1 0.1 0.07 13.0 0.1 1.1 1 0 0 1 1 1 0 Sec23/Sec24 helical domain Copper-fist PF00649.18 NODE_80963_length_196_cov_0.987578_g73022_i0reverse_frame_1 - 0.0086 15.5 0.3 0.013 14.9 0.3 1.4 1 0 0 1 1 1 1 Copper fist DNA binding domain PP2C PF00481.21 NODE_80952_length_196_cov_0.987578_g73011_i0reverse_frame_1 - 0.14 11.7 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein phosphatase 2C Orai-1 PF07856.12 NODE_80949_length_196_cov_0.987578_g73008_i0reverse_frame_1 - 0.083 12.6 1.0 0.092 12.4 1.0 1.0 1 0 0 1 1 1 0 Mediator of CRAC channel activity Exo_endo_phos PF03372.23 NODE_80933_length_196_cov_0.993789_g72992_i0forward_frame_1 - 7.3e-05 22.4 0.0 7.4e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_80933_length_196_cov_0.993789_g72992_i0forward_frame_1 - 0.0014 18.5 0.0 0.0014 18.5 0.0 1.1 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase PgdA_N PF18627.1 NODE_80927_length_196_cov_0.993789_g72986_i0reverse_frame_1 - 0.0073 16.0 0.3 0.0075 15.9 0.3 1.0 1 0 0 1 1 1 1 Peptidoglycan GlcNAc deacetylase N-terminal domain Coleoptericin PF06286.11 NODE_80920_length_196_cov_0.993789_g72979_i0forward_frame_1 - 0.18 11.9 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Coleoptericin TB PF00683.17 NODE_80915_length_196_cov_1.000000_g72974_i0reverse_frame_1 - 0.016 15.0 2.1 0.021 14.6 2.1 1.3 1 0 0 1 1 1 0 TB domain Nitr_red_bet_C PF14711.6 NODE_80899_length_196_cov_1.080745_g72958_i0forward_frame_1 - 0.016 14.9 0.4 0.024 14.3 0.4 1.3 1 0 0 1 1 1 0 Respiratory nitrate reductase beta C-terminal Peptidase_S68 PF10461.9 NODE_80885_length_196_cov_1.149068_g72944_i0reverse_frame_1 - 0.21 11.8 2.7 5.4 7.3 0.9 2.3 2 0 0 2 2 2 0 Peptidase S68 DUF3332 PF11810.8 NODE_80873_length_196_cov_1.180124_g72932_i0reverse_frame_1 - 0.083 12.5 0.8 0.087 12.5 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) PPR PF01535.20 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 2.4e-05 24.2 0.0 0.027 14.7 0.0 2.1 2 0 0 2 2 2 2 PPR repeat PPR_2 PF13041.6 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.0056 16.8 0.0 3 8.1 0.0 2.1 2 0 0 2 2 2 2 PPR repeat family Siah-Interact_N PF09032.11 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.014 15.7 0.0 0.017 15.4 0.0 1.2 1 0 0 1 1 1 0 Siah interacting protein, N terminal TPR_19 PF14559.6 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.023 15.2 0.1 0.044 14.3 0.1 1.5 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.097 13.5 0.3 20 6.4 0.1 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat PPR_1 PF12854.7 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.098 12.4 0.0 0.19 11.4 0.0 1.5 1 0 0 1 1 1 0 PPR repeat Ank_2 PF12796.7 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.12 13.0 0.0 0.13 12.8 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Pkinase PF00069.25 NODE_80850_length_196_cov_1.242236_g72909_i0forward_frame_1 - 0.0084 15.5 0.3 0.0091 15.4 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Ribosomal_L40e PF01020.17 NODE_80849_length_196_cov_1.242236_g72908_i0forward_frame_1 - 0.079 12.9 6.2 1.1 9.2 0.0 2.2 2 0 0 2 2 2 0 Ribosomal L40e family YqfQ PF14181.6 NODE_80839_length_196_cov_1.298137_g72898_i0reverse_frame_1 - 3.3 7.9 8.3 3.6 7.7 8.3 1.0 1 0 0 1 1 1 0 YqfQ-like protein Defensin_5 PF18251.1 NODE_80836_length_196_cov_1.310559_g72895_i0forward_frame_1 - 0.01 15.9 0.9 0.014 15.5 0.9 1.2 1 0 0 1 1 1 0 Fungal defensin Copsin DUF2959 PF11172.8 NODE_80834_length_196_cov_1.322981_g72893_i0forward_frame_1 - 0.0058 16.8 1.2 0.006 16.7 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2959) Toxin_TOLIP PF00087.21 NODE_80831_length_196_cov_1.341615_g72890_i0reverse_frame_1 - 0.039 14.2 0.1 0.049 13.9 0.1 1.2 1 0 0 1 1 1 0 Snake toxin and toxin-like protein Trefoil PF00088.18 NODE_80830_length_196_cov_1.347826_g72889_i0forward_frame_1 - 0.07 13.0 2.0 0.44 10.5 0.3 2.1 1 1 1 2 2 2 0 Trefoil (P-type) domain Lamprin PF06403.11 NODE_80829_length_196_cov_1.354037_g72888_i0reverse_frame_1 - 0.11 12.4 1.3 0.13 12.2 1.3 1.3 1 1 0 1 1 1 0 Lamprin Fusion_F0 PF13044.6 NODE_80817_length_196_cov_1.422360_g72876_i0forward_frame_1 - 0.01 14.5 0.0 0.011 14.5 0.0 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0, Isavirus dDENN PF03455.19 NODE_80816_length_196_cov_1.428571_g72875_i0reverse_frame_1 - 0.071 13.1 0.4 0.1 12.6 0.4 1.2 1 0 0 1 1 1 0 dDENN domain RNA_pol_Rpb5_N PF03871.14 NODE_80814_length_196_cov_1.440994_g72873_i0forward_frame_1 - 0.063 13.9 0.2 0.068 13.8 0.2 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb5, N-terminal domain FBD PF08387.10 NODE_80812_length_196_cov_1.447205_g72871_i0reverse_frame_1 - 0.014 15.3 0.2 0.03 14.2 0.2 1.7 1 1 0 1 1 1 0 FBD COesterase PF00135.28 NODE_80810_length_196_cov_1.447205_g72869_i0reverse_frame_1 - 0.17 10.7 0.0 0.17 10.7 0.0 1.0 1 0 0 1 1 1 0 Carboxylesterase family DDE_5 PF13546.6 NODE_80800_length_196_cov_1.478261_g72859_i0reverse_frame_1 - 0.089 12.1 2.1 0.1 11.9 2.1 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease Tim44 PF04280.15 NODE_80798_length_196_cov_1.478261_g72857_i0reverse_frame_1 - 0.1 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Tim44-like domain Tubulin_C PF03953.17 NODE_80797_length_196_cov_1.478261_g72856_i0forward_frame_1 - 4e-22 78.7 0.0 4.3e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin C-terminal domain PLATZ PF04640.14 NODE_80789_length_196_cov_1.484472_g72848_i0forward_frame_1 - 0.14 12.8 0.2 0.14 12.8 0.2 1.1 1 0 0 1 1 1 0 PLATZ transcription factor DUF4157 PF13699.6 NODE_80773_length_196_cov_1.490683_g72832_i0forward_frame_1 - 0.11 12.8 0.1 0.19 12.0 0.0 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4157) Fucokinase PF07959.12 NODE_80766_length_196_cov_1.490683_g72825_i0forward_frame_1 - 0.022 13.7 0.5 0.026 13.5 0.5 1.0 1 0 0 1 1 1 0 L-fucokinase DUF4719 PF15843.5 NODE_80766_length_196_cov_1.490683_g72825_i0forward_frame_1 - 0.2 11.8 0.2 0.22 11.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) Hormone_recep PF00104.30 NODE_80763_length_196_cov_1.490683_g72822_i0forward_frame_1 - 0.036 13.6 0.3 0.039 13.5 0.3 1.1 1 0 0 1 1 1 0 Ligand-binding domain of nuclear hormone receptor DUF3387 PF11867.8 NODE_80763_length_196_cov_1.490683_g72822_i0forward_frame_1 - 0.042 13.2 0.1 0.043 13.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3387) DUF3762 PF12591.8 NODE_80762_length_196_cov_1.490683_g72821_i0reverse_frame_1 - 0.11 12.8 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3762) zf-SNAP50_C PF12251.8 NODE_80756_length_196_cov_1.509317_g72815_i0forward_frame_1 - 0.042 13.5 0.4 0.046 13.4 0.4 1.1 1 0 0 1 1 1 0 snRNA-activating protein of 50kDa MW C terminal Transketolase_N PF00456.21 NODE_80754_length_196_cov_1.527950_g72813_i0forward_frame_1 - 0.00085 18.4 0.0 0.00085 18.4 0.0 1.1 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Tubulin PF00091.25 NODE_80750_length_196_cov_1.540373_g72809_i0reverse_frame_1 - 0.074 13.2 0.0 0.088 13.0 0.0 1.1 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain SirB PF04247.12 NODE_80748_length_196_cov_1.559006_g72807_i0reverse_frame_1 - 0.00026 21.1 0.9 0.0003 20.9 0.9 1.1 1 0 0 1 1 1 1 Invasion gene expression up-regulator, SirB Peptidase_M50B PF13398.6 NODE_80748_length_196_cov_1.559006_g72807_i0reverse_frame_1 - 0.0099 15.5 1.3 0.011 15.4 1.3 1.0 1 0 0 1 1 1 1 Peptidase M50B-like DUF1262 PF06880.11 NODE_80740_length_196_cov_1.602484_g72799_i0reverse_frame_1 - 0.079 13.4 0.1 0.086 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1262) BRCC36_C PF18110.1 NODE_80740_length_196_cov_1.602484_g72799_i0forward_frame_1 - 0.14 12.3 0.1 0.92 9.7 0.1 1.9 2 0 0 2 2 2 0 BRCC36 C-terminal helical domain HpaB PF03241.13 NODE_80734_length_196_cov_1.614907_g72793_i0forward_frame_1 - 0.15 11.1 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase C terminal Herpes_LAMP2 PF06126.11 NODE_80727_length_196_cov_1.645963_g72786_i0forward_frame_1 - 0.013 14.1 0.3 0.016 13.9 0.3 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 Staphostatin_A PF09022.10 NODE_80723_length_196_cov_1.677019_g72782_i0reverse_frame_1 - 0.036 14.0 0.2 0.042 13.7 0.2 1.1 1 0 0 1 1 1 0 Staphostatin A HSBP1 PF06825.12 NODE_80719_length_196_cov_1.695652_g72778_i0forward_frame_1 - 0.0069 16.2 0.1 0.0095 15.8 0.1 1.2 1 0 0 1 1 1 1 Heat shock factor binding protein 1 Methyltransf_25 PF13649.6 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 5.9e-07 30.1 0.0 8.6e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.00012 22.6 0.0 0.00017 22.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.0002 21.2 0.0 0.00024 20.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.0011 19.7 0.0 0.0018 19.0 0.0 1.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.0021 17.9 0.0 0.0024 17.7 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.016 14.8 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase small domain PrmA PF06325.13 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.058 12.8 0.0 0.062 12.7 0.0 1.0 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.089 12.3 0.0 0.099 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_32 PF13679.6 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.1 12.6 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.11 11.7 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase RrnaAD PF00398.20 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.28 10.2 0.0 0.28 10.2 0.0 1.0 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase SchA_CurD PF04486.12 NODE_80700_length_196_cov_1.788820_g72759_i0reverse_frame_1 - 0.056 13.5 1.2 0.065 13.3 1.2 1.1 1 0 0 1 1 1 0 SchA/CurD like domain Colicin PF01024.19 NODE_80700_length_196_cov_1.788820_g72759_i0reverse_frame_1 - 0.062 13.2 0.5 0.068 13.1 0.5 1.1 1 0 0 1 1 1 0 Colicin pore forming domain EMC3_TMCO1 PF01956.16 NODE_80700_length_196_cov_1.788820_g72759_i0reverse_frame_1 - 0.092 12.5 2.6 0.091 12.5 2.6 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like LapA_dom PF06305.11 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_1 - 0.12 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain EMC3_TMCO1 PF01956.16 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_1 - 0.18 11.5 0.0 0.21 11.3 0.0 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like cEGF PF12662.7 NODE_80693_length_196_cov_1.850932_g72752_i0forward_frame_1 - 0.019 14.9 0.7 0.019 14.9 0.7 3.7 4 2 0 4 4 4 0 Complement Clr-like EGF-like Lustrin_cystein PF14625.6 NODE_80693_length_196_cov_1.850932_g72752_i0forward_frame_1 - 0.023 15.1 13.4 6 7.3 0.1 3.1 2 1 1 3 3 3 0 Lustrin, cysteine-rich repeated domain Opy2 PF09463.10 NODE_80693_length_196_cov_1.850932_g72752_i0forward_frame_1 - 1.8 8.9 14.0 3 8.2 4.6 2.8 3 0 0 3 3 3 0 Opy2 protein Fcf2 PF08698.11 NODE_80680_length_196_cov_1.913043_g72739_i0reverse_frame_1 - 0.09 13.2 0.0 0.09 13.2 0.0 1.1 1 0 0 1 1 1 0 Fcf2 pre-rRNA processing LAT PF15234.6 NODE_80665_length_196_cov_1.981366_g72724_i0forward_frame_1 - 0.18 11.5 0.9 0.18 11.5 0.9 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells AGH PF17558.2 NODE_80660_length_196_cov_2.006211_g72719_i0forward_frame_1 - 0.093 12.9 0.5 0.1 12.8 0.5 1.1 1 0 0 1 1 1 0 Androgenic gland hormone FUSC PF04632.12 NODE_80652_length_196_cov_2.099379_g72711_i0reverse_frame_1 - 5.5e-12 45.0 0.4 6.2e-12 44.9 0.4 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family FlxA PF14282.6 NODE_80647_length_196_cov_2.136646_g72706_i0reverse_frame_1 - 0.014 15.4 1.6 0.02 14.9 1.6 1.3 1 0 0 1 1 1 0 FlxA-like protein HEPN_SAV2148 PF18725.1 NODE_80642_length_196_cov_2.204969_g72701_i0forward_frame_1 - 0.064 12.7 0.0 0.072 12.5 0.0 1.1 1 0 0 1 1 1 0 SAV2148-like HEPN HEAT PF02985.22 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 3.4e-06 26.8 0.6 5.7e-06 26.1 0.1 1.7 2 0 0 2 2 2 1 HEAT repeat HEAT_EZ PF13513.6 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 9.5e-06 26.0 0.0 2.3e-05 24.8 0.0 1.6 2 0 0 2 2 2 1 HEAT-like repeat Vac14_Fab1_bd PF12755.7 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0002 21.9 0.0 0.0002 21.9 0.0 1.1 1 0 0 1 1 1 1 Vacuolar 14 Fab1-binding region Arm PF00514.23 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0018 18.3 0.1 0.0026 17.7 0.1 1.4 1 0 0 1 1 1 1 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0025 18.2 0.0 0.0025 18.2 0.0 1.2 1 0 0 1 1 1 1 HEAT repeats Cnd1 PF12717.7 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0031 17.6 0.0 0.0035 17.4 0.0 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Prolamin_like PF05617.11 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0036 17.5 0.2 0.0044 17.2 0.2 1.2 1 0 0 1 1 1 1 Prolamin-like DegT_DnrJ_EryC1 PF01041.17 NODE_80636_length_196_cov_2.260870_g72695_i0reverse_frame_1 - 6.9e-26 91.4 0.5 7.3e-26 91.3 0.5 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 NODE_80636_length_196_cov_2.260870_g72695_i0reverse_frame_1 - 0.0002 20.6 0.0 0.00021 20.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Peptidase_M3 PF01432.20 NODE_80624_length_196_cov_2.453416_g72683_i0reverse_frame_1 - 0.0047 16.3 0.1 0.0052 16.1 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M3 Antimicrobial19 PF08225.11 NODE_80624_length_196_cov_2.453416_g72683_i0reverse_frame_1 - 0.27 10.9 0.1 0.27 10.9 0.1 2.1 2 0 0 2 2 2 0 Pseudin antimicrobial peptide Aldo_ket_red PF00248.21 NODE_80586_length_196_cov_3.633540_g72645_i0reverse_frame_1 - 8.7e-05 21.9 0.0 8.7e-05 21.9 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family PLA2_inh PF02988.15 NODE_80582_length_196_cov_3.987578_g72641_i0forward_frame_1 - 0.11 13.2 0.0 0.12 13.1 0.0 1.1 1 0 0 1 1 1 0 Phospholipase A2 inhibitor Tho1_MOS11_C PF18592.1 NODE_80578_length_196_cov_6.509317_g72637_i0reverse_frame_1 - 0.033 14.0 0.6 0.044 13.6 0.6 1.2 1 0 0 1 1 1 0 Tho1/MOS11 C-terminal domain Defensin_2 PF01097.18 NODE_80572_length_196_cov_18.770186_g72631_i0forward_frame_1 - 0.04 13.9 8.2 0.054 13.4 3.7 2.2 2 0 0 2 2 2 0 Arthropod defensin DUF4575 PF15143.6 NODE_80566_length_196_cov_33.031056_g72625_i0forward_frame_1 - 0.049 13.8 0.1 0.049 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4575) Histone_H2A_C PF16211.5 NODE_80564_length_196_cov_36.304348_g72623_i0forward_frame_1 - 0.34 10.7 4.3 0.66 9.8 4.3 1.5 1 0 0 1 1 1 0 C-terminus of histone H2A Thioredoxin PF00085.20 NODE_80560_length_196_cov_39.701863_g72619_i0reverse_frame_1 - 0.024 14.6 0.1 0.027 14.5 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin Zn_ribbon_17 PF17120.5 NODE_80558_length_196_cov_40.031056_g72617_i0forward_frame_1 - 0.68 9.6 5.8 0.87 9.3 5.8 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Histone_H2A_C PF16211.5 NODE_80549_length_196_cov_46.807453_g72608_i0reverse_frame_1 - 0.28 10.9 3.1 45 3.9 0.0 2.2 2 0 0 2 2 2 0 C-terminus of histone H2A AOX PF01786.17 NODE_80549_length_196_cov_46.807453_g72608_i0forward_frame_1 - 0.21 11.2 0.0 0.22 11.1 0.0 1.0 1 0 0 1 1 1 0 Alternative oxidase Ribosomal_S17 PF00366.20 NODE_80544_length_196_cov_54.000000_g72603_i0forward_frame_1 - 1.5e-07 31.4 0.0 2.5e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S17 Cyto_heme_lyase PF01265.17 NODE_80538_length_196_cov_67.776398_g72597_i0forward_frame_1 - 0.026 14.1 0.0 0.03 13.9 0.0 1.0 1 0 0 1 1 1 0 Cytochrome c/c1 heme lyase DIM PF08194.12 NODE_80538_length_196_cov_67.776398_g72597_i0forward_frame_1 - 0.19 12.0 0.0 0.19 12.0 0.0 1.8 2 0 0 2 2 2 0 DIM protein Gpr1_Fun34_YaaH PF01184.19 NODE_80528_length_196_cov_93.850932_g72587_i0forward_frame_1 - 0.028 14.0 0.3 0.03 13.9 0.3 1.0 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family Mating_C PF12737.7 NODE_80524_length_196_cov_119.024845_g72583_i0reverse_frame_1 - 0.1 11.8 2.5 0.1 11.8 2.5 1.0 1 0 0 1 1 1 0 C-terminal domain of homeodomain 1 MtmB PF05369.12 NODE_80524_length_196_cov_119.024845_g72583_i0reverse_frame_1 - 0.12 11.2 0.2 0.11 11.3 0.2 1.1 1 0 0 1 1 1 0 Monomethylamine methyltransferase MtmB DUF562 PF04763.12 NODE_80522_length_196_cov_135.726708_g72581_i0forward_frame_1 - 0.1 12.1 0.2 0.11 11.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF562) Sugar_tr PF00083.24 NODE_80515_length_196_cov_321.105590_g72574_i0forward_frame_1 - 7.3e-07 28.4 1.1 7.6e-07 28.3 1.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Agglutinin PF07468.11 NODE_80514_length_196_cov_343.428571_g72573_i0reverse_frame_1 - 0.019 15.2 0.3 0.021 15.0 0.3 1.0 1 0 0 1 1 1 0 Agglutinin domain TMEM208_SND2 PF05620.11 NODE_80508_length_196_cov_119487.993789_g72567_i0forward_frame_1 - 0.56 10.0 3.3 0.22 11.3 0.9 1.5 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 KxDL PF10241.9 NODE_80505_length_197_cov_0.777778_g72564_i0forward_frame_1 - 0.042 14.1 1.1 0.048 13.9 1.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein FAP PF07174.11 NODE_80502_length_197_cov_0.858025_g72561_i0reverse_frame_1 - 0.87 9.0 12.5 0.97 8.8 12.5 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_80502_length_197_cov_0.858025_g72561_i0forward_frame_1 - 0.49 10.4 9.0 4.5 7.2 9.0 1.9 1 1 0 1 1 1 0 Lamprin SHIPPO-rpt PF07004.12 NODE_80494_length_197_cov_0.938272_g72553_i0reverse_frame_1 - 0.0048 17.8 6.6 0.035 15.0 2.4 2.5 2 1 0 2 2 2 2 Sperm-tail PG-rich repeat E3_UbLigase_EDD PF11547.8 NODE_80483_length_197_cov_0.981481_g72542_i0forward_frame_1 - 0.058 13.1 0.0 0.071 12.8 0.0 1.1 1 0 0 1 1 1 0 E3 ubiquitin ligase EDD MRG PF05712.13 NODE_80476_length_197_cov_0.981481_g72535_i0reverse_frame_1 - 0.04 13.2 0.0 0.043 13.1 0.0 1.1 1 0 0 1 1 1 0 MRG MANEC PF07502.14 NODE_80469_length_197_cov_0.987654_g72528_i0forward_frame_1 - 0.009 16.3 0.1 0.01 16.1 0.1 1.1 1 0 0 1 1 1 1 MANEC domain DUF3399 PF11879.8 NODE_80460_length_197_cov_0.987654_g72519_i0forward_frame_1 - 0.086 13.2 0.4 0.1 13.0 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) PMR5N PF14416.6 NODE_80457_length_197_cov_0.987654_g72516_i0reverse_frame_1 - 0.099 13.0 0.5 0.14 12.5 0.5 1.3 1 0 0 1 1 1 0 PMR5 N terminal Domain GARS_A PF01071.19 NODE_80449_length_197_cov_0.987654_g72508_i0reverse_frame_1 - 1.9e-16 60.4 0.0 2.1e-16 60.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_3 PF02655.14 NODE_80449_length_197_cov_0.987654_g72508_i0reverse_frame_1 - 0.083 12.9 0.0 0.094 12.8 0.0 1.0 1 0 0 1 1 1 0 ATP-grasp domain DUF1601 PF07671.11 NODE_80433_length_197_cov_0.987654_g72492_i0forward_frame_1 - 0.18 11.7 0.4 0.38 10.6 0.0 1.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1601) Mit_KHE1 PF10173.9 NODE_80423_length_197_cov_1.061728_g72482_i0forward_frame_1 - 0.1 12.7 0.0 0.12 12.4 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related MAGE_N PF12440.8 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_1 - 0.012 16.3 3.9 0.015 16.0 3.9 1.1 1 0 0 1 1 1 0 Melanoma associated antigen family N terminal V4R PF02830.18 NODE_80408_length_197_cov_1.166667_g72467_i0reverse_frame_1 - 0.045 13.8 0.4 0.07 13.1 0.4 1.4 1 1 0 1 1 1 0 V4R domain DUF489 PF04356.12 NODE_80407_length_197_cov_1.166667_g72466_i0forward_frame_1 - 0.069 13.2 0.0 0.069 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF489) DUF1069 PF06370.11 NODE_80407_length_197_cov_1.166667_g72466_i0forward_frame_1 - 0.18 11.3 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1069) Kri1 PF05178.12 NODE_80401_length_197_cov_1.185185_g72460_i0reverse_frame_1 - 1.5e-07 31.9 5.4 1.6e-07 31.8 5.4 1.1 1 0 0 1 1 1 1 KRI1-like family Phage_lysozyme PF00959.19 NODE_80401_length_197_cov_1.185185_g72460_i0reverse_frame_1 - 0.13 12.7 0.0 0.14 12.6 0.0 1.0 1 0 0 1 1 1 0 Phage lysozyme Cytochrom_B_C PF00032.17 NODE_80394_length_197_cov_1.222222_g72453_i0forward_frame_1 - 0.042 14.1 0.7 0.045 14.0 0.7 1.1 1 0 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD Zap1_zf2 PF18217.1 NODE_80390_length_197_cov_1.228395_g72449_i0forward_frame_1 - 0.0098 15.9 1.9 2.4 8.2 0.9 2.4 2 0 0 2 2 2 2 Zap1 zinc finger 2 Nup54 PF13874.6 NODE_80384_length_197_cov_1.234568_g72443_i0reverse_frame_1 - 0.057 13.5 0.2 0.065 13.4 0.2 1.0 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 DUF460 PF04312.13 NODE_80379_length_197_cov_1.246914_g72438_i0reverse_frame_1 - 0.11 12.3 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF460) PUB PF09409.10 NODE_80368_length_197_cov_1.339506_g72427_i0forward_frame_1 - 0.13 12.2 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 PUB domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks373.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks373.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks373.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks373.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:27:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- IIGP PF05049.13 NODE_80361_length_197_cov_1.364198_g72420_i0reverse_frame_1 - 0.013 14.6 1.8 0.014 14.5 1.8 1.0 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) B56 PF01603.20 NODE_80360_length_197_cov_1.370370_g72419_i0reverse_frame_1 - 0.0051 15.9 0.7 0.0055 15.7 0.7 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) Ycf70 PF17382.2 NODE_80358_length_197_cov_1.382716_g72417_i0reverse_frame_1 - 2.6 8.5 5.2 4.1 7.9 5.2 1.5 1 1 0 1 1 1 0 Uncharacterized Ycf70-like zf-CCHC_2 PF13696.6 NODE_80358_length_197_cov_1.382716_g72417_i0forward_frame_1 - 3.3e-13 49.2 5.0 4.8e-13 48.7 5.0 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC PF00098.23 NODE_80358_length_197_cov_1.382716_g72417_i0forward_frame_1 - 5.9e-06 26.1 2.4 1.5e-05 24.9 1.1 2.0 2 0 0 2 2 2 1 Zinc knuckle zf-CCHC_3 PF13917.6 NODE_80358_length_197_cov_1.382716_g72417_i0forward_frame_1 - 0.016 15.2 0.5 0.024 14.6 0.1 1.5 2 0 0 2 2 2 0 Zinc knuckle DUF5506 PF17611.2 NODE_80354_length_197_cov_1.401235_g72413_i0reverse_frame_1 - 0.082 12.8 0.1 0.087 12.7 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5506) MS_channel PF00924.18 NODE_80351_length_197_cov_1.407407_g72410_i0forward_frame_1 - 0.18 11.3 1.2 0.2 11.2 1.2 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel EpoR_lig-bind PF09067.10 NODE_80350_length_197_cov_1.425926_g72409_i0forward_frame_1 - 0.16 12.2 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 Erythropoietin receptor, ligand binding Adeno_shaft PF00608.17 NODE_80344_length_197_cov_1.444444_g72403_i0reverse_frame_1 - 0.12 12.3 0.1 0.86 9.5 0.0 2.0 2 0 0 2 2 2 0 Adenoviral fibre protein (repeat/shaft region) WD40 PF00400.32 NODE_80340_length_197_cov_1.456790_g72399_i0forward_frame_1 - 2.3e-05 25.1 0.3 0.34 11.9 0.1 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat AsnC_trans_reg PF01037.21 NODE_80340_length_197_cov_1.456790_g72399_i0forward_frame_1 - 0.16 11.9 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 Lrp/AsnC ligand binding domain TORC_M PF12885.7 NODE_80339_length_197_cov_1.462963_g72398_i0reverse_frame_1 - 0.1 12.5 1.1 0.1 12.5 1.1 1.0 1 0 0 1 1 1 0 Transducer of regulated CREB activity middle domain SH2_2 PF14633.6 NODE_80339_length_197_cov_1.462963_g72398_i0reverse_frame_1 - 0.34 10.3 2.7 0.36 10.2 2.7 1.0 1 0 0 1 1 1 0 SH2 domain DUF4131 PF13567.6 NODE_80339_length_197_cov_1.462963_g72398_i0forward_frame_1 - 0.69 9.6 6.8 0.74 9.5 6.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3566 PF12089.8 NODE_80339_length_197_cov_1.462963_g72398_i0forward_frame_1 - 2.5 8.5 5.6 6.2 7.2 3.9 1.9 1 1 1 2 2 2 0 Transmembrane domain of unknown function (DUF3566) DUF4227 PF14004.6 NODE_80333_length_197_cov_1.469136_g72392_i0forward_frame_1 - 0.12 12.4 0.2 0.15 12.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) SKA2 PF16740.5 NODE_80328_length_197_cov_1.475309_g72387_i0reverse_frame_1 - 0.065 13.0 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Carla_C4 PF01623.17 NODE_80314_length_197_cov_1.481481_g72373_i0reverse_frame_1 - 0.036 14.0 0.3 0.042 13.8 0.3 1.2 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein Neurexophilin PF06312.12 NODE_80311_length_197_cov_1.481481_g72370_i0forward_frame_1 - 0.091 12.2 0.0 0.095 12.2 0.0 1.0 1 0 0 1 1 1 0 Neurexophilin Flp_N PF03930.14 NODE_80308_length_197_cov_1.500000_g72367_i0forward_frame_1 - 0.042 13.8 0.8 0.045 13.7 0.1 1.4 2 0 0 2 2 2 0 Recombinase Flp protein N-terminus Peptidase_M44 PF03410.13 NODE_80300_length_197_cov_1.604938_g72359_i0forward_frame_1 - 0.28 9.7 0.1 0.26 9.8 0.1 1.0 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox Tht1 PF04163.12 NODE_80298_length_197_cov_1.623457_g72357_i0reverse_frame_1 - 0.11 11.3 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein UB2H PF14814.6 NODE_80295_length_197_cov_1.648148_g72354_i0reverse_frame_1 - 0.011 15.7 0.2 0.012 15.6 0.2 1.1 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain Tubulin_2 PF13809.6 NODE_80294_length_197_cov_1.654321_g72353_i0reverse_frame_1 - 0.14 11.3 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Tubulin like V_ATPase_I PF01496.19 NODE_80290_length_197_cov_1.666667_g72349_i0reverse_frame_1 - 2.7e-05 22.3 0.0 2.8e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF3761 PF12587.8 NODE_80287_length_197_cov_1.703704_g72346_i0forward_frame_1 - 0.079 13.4 0.3 0.1 13.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3761) DUF4431 PF14485.6 NODE_80277_length_197_cov_1.728395_g72336_i0reverse_frame_1 - 0.049 13.4 0.0 0.077 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4431) TFX_C PF14601.6 NODE_80275_length_197_cov_1.759259_g72334_i0reverse_frame_1 - 0.15 12.0 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term GH131_N PF18271.1 NODE_80272_length_197_cov_1.771605_g72331_i0reverse_frame_1 - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 Glycoside hydrolase 131 catalytic N-terminal domain DUF3839 PF12943.7 NODE_80269_length_197_cov_1.796296_g72328_i0reverse_frame_1 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) ACDC PF14733.6 NODE_80263_length_197_cov_1.864198_g72322_i0reverse_frame_1 - 0.079 13.3 0.6 0.086 13.2 0.4 1.2 1 1 0 1 1 1 0 AP2-coincident C-terminal F-box-like PF12937.7 NODE_80257_length_197_cov_1.907407_g72316_i0forward_frame_1 - 0.29 11.1 2.9 0.31 11.0 0.5 1.9 2 0 0 2 2 2 0 F-box-like ChaC PF04752.12 NODE_80252_length_197_cov_1.950617_g72311_i0reverse_frame_1 - 0.031 14.3 0.1 0.037 14.1 0.1 1.1 1 0 0 1 1 1 0 ChaC-like protein Sod_Fe_N PF00081.22 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_1 - 5.8e-07 29.9 0.1 7.3e-07 29.6 0.1 1.2 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Sod_Fe_C PF02777.18 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_1 - 0.011 15.8 0.1 0.067 13.4 0.0 1.9 2 0 0 2 2 2 0 Iron/manganese superoxide dismutases, C-terminal domain MPM1 PF17234.2 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_1 - 0.091 13.0 0.0 0.099 12.9 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 DUF4556 PF15094.6 NODE_80243_length_197_cov_1.993827_g72302_i0forward_frame_1 - 0.085 12.1 0.6 0.096 11.9 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4556) Tetraspanin PF00335.20 NODE_80240_length_197_cov_2.006173_g72299_i0reverse_frame_1 - 0.0011 18.8 12.0 0.0011 18.7 12.0 1.0 1 0 0 1 1 1 1 Tetraspanin family SUR7 PF06687.12 NODE_80240_length_197_cov_2.006173_g72299_i0reverse_frame_1 - 1.4 8.5 11.1 1.6 8.3 11.1 1.0 1 0 0 1 1 1 0 SUR7/PalI family PPV_E2_C PF00511.17 NODE_80232_length_197_cov_2.061728_g72291_i0forward_frame_1 - 0.042 14.0 0.0 0.058 13.6 0.0 1.3 1 0 0 1 1 1 0 E2 (early) protein, C terminal PADR1 PF08063.12 NODE_80223_length_197_cov_2.166667_g72282_i0reverse_frame_1 - 0.017 14.9 1.9 0.017 14.9 1.9 1.6 1 1 0 1 1 1 0 PADR1 (NUC008) domain TauE PF01925.19 NODE_80218_length_197_cov_2.216049_g72277_i0reverse_frame_1 - 0.0049 16.5 0.4 0.0052 16.4 0.4 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Colicin_Ia PF11504.8 NODE_80218_length_197_cov_2.216049_g72277_i0forward_frame_1 - 0.088 12.9 0.3 0.11 12.7 0.3 1.2 1 0 0 1 1 1 0 Colicin Ia Helicase_C_3 PF13625.6 NODE_80213_length_197_cov_2.246914_g72272_i0forward_frame_1 - 0.0015 18.7 0.0 0.0018 18.4 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PsbH PF00737.20 NODE_80210_length_197_cov_2.333333_g72269_i0reverse_frame_1 - 0.32 10.7 0.5 0.48 10.2 0.5 1.2 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein Opiods_neuropep PF01160.18 NODE_80202_length_197_cov_2.413580_g72261_i0reverse_frame_1 - 0.17 12.0 3.4 0.2 11.8 1.8 1.8 1 1 1 2 2 2 0 Vertebrate endogenous opioids neuropeptide Pkinase PF00069.25 NODE_80187_length_197_cov_2.833333_g72246_i0reverse_frame_1 - 0.019 14.3 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain SNURF PF07192.11 NODE_80182_length_197_cov_2.938272_g72241_i0reverse_frame_1 - 0.046 13.6 0.2 0.063 13.1 0.2 1.2 1 0 0 1 1 1 0 SNURF/RPN4 protein ArAE_1 PF06081.11 NODE_80154_length_197_cov_20.135802_g72213_i0reverse_frame_1 - 0.32 11.1 5.2 0.35 11.0 5.2 1.1 1 0 0 1 1 1 0 Aromatic acid exporter family member 1 DUF4710 PF15828.5 NODE_80153_length_197_cov_20.506173_g72212_i0reverse_frame_1 - 0.043 13.9 4.3 0.054 13.6 4.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) WD40_alt PF14077.6 NODE_80150_length_197_cov_23.518519_g72209_i0forward_frame_1 - 0.061 13.2 0.6 0.08 12.8 0.6 1.3 1 0 0 1 1 1 0 Alternative WD40 repeat motif S1FA PF04689.13 NODE_80144_length_197_cov_27.259259_g72203_i0forward_frame_1 - 0.065 13.4 4.7 0.088 13.0 4.7 1.2 1 0 0 1 1 1 0 DNA binding protein S1FA FerB PF08150.12 NODE_80143_length_197_cov_27.290123_g72202_i0forward_frame_1 - 0.02 15.5 0.0 0.028 15.0 0.0 1.3 1 0 0 1 1 1 0 FerB (NUC096) domain MORN PF02493.20 NODE_80138_length_197_cov_33.240741_g72197_i0reverse_frame_1 - 4.6e-13 48.2 8.9 4e-07 29.6 2.5 2.3 2 0 0 2 2 2 2 MORN repeat Tudor_2 PF18104.1 NODE_80138_length_197_cov_33.240741_g72197_i0reverse_frame_1 - 0.052 13.2 2.1 5.5 6.7 0.4 2.2 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain YpjP PF14005.6 NODE_80124_length_197_cov_46.432099_g72183_i0forward_frame_1 - 0.25 11.4 0.1 0.31 11.1 0.1 1.1 1 0 0 1 1 1 0 YpjP-like protein DUF4050 PF13259.6 NODE_80120_length_197_cov_48.666667_g72179_i0forward_frame_1 - 0.058 13.7 0.0 0.064 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) Rz1 PF06085.11 NODE_80119_length_197_cov_49.469136_g72178_i0reverse_frame_1 - 0.12 12.1 4.8 0.47 10.2 4.8 2.1 1 1 0 1 1 1 0 Lipoprotein Rz1 precursor Phage_T7_tail PF03906.14 NODE_80110_length_197_cov_58.956790_g72169_i0forward_frame_1 - 0.13 11.9 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Phage T7 tail fibre protein YMF19 PF02326.15 NODE_80099_length_197_cov_78.425926_g72158_i0reverse_frame_1 - 0.015 16.0 0.1 0.018 15.8 0.1 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 DUF5331 PF17265.2 NODE_80094_length_197_cov_99.901235_g72153_i0forward_frame_1 - 0.098 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5331) MotB_plug PF13677.6 NODE_80090_length_197_cov_135.432099_g72149_i0forward_frame_1 - 0.14 11.7 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Membrane MotB of proton-channel complex MotA/MotB MORN PF02493.20 NODE_80089_length_197_cov_138.611111_g72148_i0reverse_frame_1 - 5.2e-08 32.3 8.1 1.1e-06 28.1 1.0 2.3 2 0 0 2 2 2 2 MORN repeat DUF3678 PF12435.8 NODE_80080_length_197_cov_291.759259_g72139_i0forward_frame_1 - 0.55 9.6 3.8 0.22 10.9 1.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) UCR_Fe-S_N PF10399.9 NODE_80080_length_197_cov_291.759259_g72139_i0forward_frame_1 - 1.1 8.6 10.0 1 8.7 0.7 2.4 2 1 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ANAPC1 PF12859.7 NODE_80079_length_197_cov_495.574074_g72138_i0reverse_frame_1 - 0.17 12.4 1.3 0.2 12.3 0.7 1.4 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 1 HSP70 PF00012.20 NODE_80077_length_197_cov_28661.567901_g72136_i0forward_frame_1 - 0.0044 15.3 1.1 0.0051 15.1 1.1 1.0 1 0 0 1 1 1 1 Hsp70 protein B12-binding_2 PF02607.17 NODE_80077_length_197_cov_28661.567901_g72136_i0forward_frame_1 - 0.016 15.7 0.1 0.017 15.5 0.1 1.1 1 0 0 1 1 1 0 B12 binding domain DUF4795 PF16043.5 NODE_80077_length_197_cov_28661.567901_g72136_i0forward_frame_1 - 0.016 14.8 1.1 0.018 14.7 1.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF2501 PF10696.9 NODE_80066_length_198_cov_0.883436_g72125_i0reverse_frame_1 - 0.014 15.7 0.1 0.017 15.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2501) COMM_domain PF07258.14 NODE_80052_length_198_cov_0.969325_g72111_i0reverse_frame_1 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 COMM domain Androgen_recep PF02166.16 NODE_80049_length_198_cov_0.975460_g72108_i0reverse_frame_1 - 0.067 12.0 14.2 0.072 11.9 14.2 1.0 1 0 0 1 1 1 0 Androgen receptor Spt20 PF12090.8 NODE_80049_length_198_cov_0.975460_g72108_i0reverse_frame_1 - 0.87 9.2 14.9 0.84 9.2 14.9 1.1 1 0 0 1 1 1 0 Spt20 family Zip PF02535.22 NODE_80049_length_198_cov_0.975460_g72108_i0reverse_frame_1 - 8.2 5.5 5.5 9.7 5.3 5.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Lustrin_cystein PF14625.6 NODE_80048_length_198_cov_0.975460_g72107_i0reverse_frame_1 - 0.3 11.5 6.4 0.16 12.4 4.6 1.6 1 1 0 1 1 1 0 Lustrin, cysteine-rich repeated domain TRIQK PF15168.6 NODE_80041_length_198_cov_0.975460_g72100_i0forward_frame_1 - 0.02 14.8 0.5 0.02 14.8 0.5 1.6 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family Phage_P2_GpU PF06995.11 NODE_80040_length_198_cov_0.975460_g72099_i0forward_frame_1 - 0.073 12.7 0.0 0.081 12.5 0.0 1.1 1 0 0 1 1 1 0 Phage P2 GpU DUF4187 PF13821.6 NODE_80037_length_198_cov_0.981595_g72096_i0reverse_frame_1 - 0.12 12.2 1.3 0.16 11.8 1.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) SelP_C PF04593.14 NODE_80028_length_198_cov_0.981595_g72087_i0reverse_frame_1 - 0.045 13.7 2.2 0.048 13.6 2.2 1.0 1 0 0 1 1 1 0 Selenoprotein P, C terminal region EF_assoc_2 PF08356.12 NODE_80027_length_198_cov_0.981595_g72086_i0reverse_frame_1 - 0.11 12.5 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 EF hand associated Topo_C_assoc PF14370.6 NODE_80023_length_198_cov_0.981595_g72082_i0reverse_frame_1 - 0.067 13.1 0.0 0.095 12.6 0.0 1.3 1 1 0 1 1 1 0 C-terminal topoisomerase domain RVT_1 PF00078.27 NODE_80023_length_198_cov_0.981595_g72082_i0forward_frame_1 - 0.0027 17.3 0.0 0.0028 17.2 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) YafO_toxin PF13957.6 NODE_80017_length_198_cov_0.981595_g72076_i0reverse_frame_1 - 0.042 13.9 0.3 0.05 13.7 0.3 1.2 1 1 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system DASH_Duo1 PF08651.10 NODE_79999_length_198_cov_1.024540_g72058_i0reverse_frame_1 - 0.13 12.0 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 DASH complex subunit Duo1 Gal-bind_lectin PF00337.22 NODE_79977_length_198_cov_1.128834_g72036_i0forward_frame_1 - 0.16 11.5 0.0 0.18 11.3 0.0 1.0 1 0 0 1 1 1 0 Galactoside-binding lectin TRP PF06011.12 NODE_79963_length_198_cov_1.171779_g72022_i0reverse_frame_1 - 0.036 12.8 0.7 0.044 12.5 0.7 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel RabGAP-TBC PF00566.18 NODE_79961_length_198_cov_1.177914_g72020_i0reverse_frame_1 - 0.026 14.2 0.0 0.027 14.1 0.0 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Imm42 PF15593.6 NODE_79957_length_198_cov_1.208589_g72016_i0reverse_frame_1 - 0.079 13.4 0.1 0.079 13.4 0.1 1.1 1 0 0 1 1 1 0 Immunity protein 42 Toxin_6 PF05453.12 NODE_79948_length_198_cov_1.226994_g72007_i0reverse_frame_1 - 0.025 15.0 1.1 0.039 14.4 1.1 1.2 1 0 0 1 1 1 0 BmTXKS1/BmP02 toxin family MecA_N PF05223.11 NODE_79947_length_198_cov_1.226994_g72006_i0reverse_frame_1 - 0.0036 17.6 1.0 0.004 17.4 1.0 1.1 1 0 0 1 1 1 1 NTF2-like N-terminal transpeptidase domain Urocanase_N PF17391.2 NODE_79945_length_198_cov_1.226994_g72004_i0forward_frame_1 - 0.075 12.7 0.0 0.19 11.4 0.0 1.6 1 1 0 1 1 1 0 Urocanase N-terminal domain AcetDehyd-dimer PF09290.11 NODE_79936_length_198_cov_1.288344_g71995_i0forward_frame_1 - 0.095 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic acetaldehyde dehydrogenase, dimerisation Lamprin PF06403.11 NODE_79934_length_198_cov_1.300613_g71993_i0reverse_frame_1 - 8.3e-06 25.8 1.6 9.6e-06 25.6 1.6 1.0 1 0 0 1 1 1 1 Lamprin zf-C2H2_11 PF16622.5 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 4.4e-07 29.5 0.5 2.1e-05 24.1 0.1 2.1 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_4 PF13894.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 8.3e-06 26.2 4.2 0.00039 21.0 0.2 2.3 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 9.9e-06 25.7 5.2 5.3e-05 23.4 0.2 2.2 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.0018 18.5 1.4 0.92 9.9 0.2 2.5 2 1 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.0023 17.9 3.1 0.0029 17.6 0.1 2.1 2 0 0 2 2 2 1 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.024 14.7 1.5 0.48 10.6 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain IL28A PF15177.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.041 13.7 0.3 0.049 13.5 0.3 1.1 1 0 0 1 1 1 0 Interleukin-28A zf-C2H2_3rep PF18868.1 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.054 14.2 2.3 0.48 11.1 0.2 2.0 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats FYDLN_acid PF09538.10 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.061 14.0 0.2 0.061 14.0 0.2 1.5 1 1 1 2 2 2 0 Protein of unknown function (FYDLN_acid) zf-C2HE PF16278.5 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.13 12.8 3.2 0.51 10.8 0.2 2.2 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-met PF12874.7 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.13 12.7 2.0 5.8 7.5 0.1 2.7 2 1 1 3 3 3 0 Zinc-finger of C2H2 type XPA_N PF01286.18 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.34 11.0 4.3 3.3 7.8 0.9 2.2 2 0 0 2 2 2 0 XPA protein N-terminal DUF2757 PF10955.8 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.4 11.0 3.2 3.1 8.1 0.2 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2757) zf-C2HC_2 PF13913.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 1.1 9.2 5.9 0.94 9.5 1.4 2.3 2 1 0 2 2 2 0 zinc-finger of a C2HC-type zf-H2C2_2 PF13465.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 2.6 8.6 5.7 7.3 7.2 0.1 3.0 3 0 0 3 3 3 0 Zinc-finger double domain DUF5510 PF17629.2 NODE_79928_length_198_cov_1.325153_g71987_i0reverse_frame_1 - 0.026 14.4 0.5 0.032 14.2 0.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5510) SF3b10 PF07189.11 NODE_79926_length_198_cov_1.337423_g71985_i0forward_frame_1 - 0.03 14.4 0.2 0.038 14.1 0.2 1.1 1 0 0 1 1 1 0 Splicing factor 3B subunit 10 (SF3b10) DUF4787 PF16029.5 NODE_79922_length_198_cov_1.361963_g71981_i0forward_frame_1 - 0.075 13.1 0.0 0.092 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4787) DUF5561 PF17716.1 NODE_79916_length_198_cov_1.404908_g71975_i0forward_frame_1 - 0.035 13.4 1.1 0.035 13.4 1.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5561) Baculo_F PF12259.8 NODE_79912_length_198_cov_1.423313_g71971_i0reverse_frame_1 - 0.0068 15.0 0.5 0.0073 14.9 0.5 1.0 1 0 0 1 1 1 1 Baculovirus F protein DASH_Dad4 PF08650.10 NODE_79912_length_198_cov_1.423313_g71971_i0reverse_frame_1 - 0.057 13.4 0.5 3.1 7.8 0.0 2.1 2 0 0 2 2 2 0 DASH complex subunit Dad4 DUF1679 PF07914.11 NODE_79907_length_198_cov_1.441718_g71966_i0reverse_frame_1 - 0.18 10.6 0.0 0.2 10.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) DUF3295 PF11702.8 NODE_79898_length_198_cov_1.453988_g71957_i0reverse_frame_1 - 0.024 14.0 0.1 0.028 13.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) RWD PF05773.22 NODE_79897_length_198_cov_1.453988_g71956_i0forward_frame_1 - 2.9e-09 37.2 0.1 3.2e-09 37.1 0.1 1.1 1 0 0 1 1 1 1 RWD domain Ig_6 PF18452.1 NODE_79882_length_198_cov_1.472393_g71941_i0reverse_frame_1 - 0.099 12.2 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin domain RVT_1 PF00078.27 NODE_79874_length_198_cov_1.472393_g71933_i0forward_frame_1 - 8.9e-06 25.4 0.0 9.3e-06 25.3 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) YWFCY PF14293.6 NODE_79866_length_198_cov_1.521472_g71925_i0forward_frame_1 - 0.036 14.4 0.6 0.051 13.9 0.2 1.6 2 0 0 2 2 2 0 YWFCY protein WD40 PF00400.32 NODE_79861_length_198_cov_1.546012_g71920_i0reverse_frame_1 - 0.0012 19.6 0.1 0.059 14.3 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat REC104 PF17378.2 NODE_79858_length_198_cov_1.558282_g71917_i0forward_frame_1 - 0.046 13.5 0.0 0.052 13.4 0.0 1.0 1 0 0 1 1 1 0 Meiotic recombination protein REC104 Importin_rep PF18773.1 NODE_79844_length_198_cov_1.638037_g71903_i0forward_frame_1 - 0.0071 16.0 0.4 0.011 15.4 0.4 1.2 1 0 0 1 1 1 1 Importin 13 repeat DUF3432 PF11914.8 NODE_79818_length_198_cov_1.754601_g71877_i0forward_frame_1 - 0.08 13.2 7.7 0.086 13.1 7.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) Ashwin PF15323.6 NODE_79816_length_198_cov_1.773006_g71875_i0reverse_frame_1 - 0.083 12.9 0.0 0.083 12.9 0.0 1.1 1 0 0 1 1 1 0 Developmental protein Oest_recep PF02159.15 NODE_79815_length_198_cov_1.785276_g71874_i0reverse_frame_1 - 0.033 14.7 0.1 0.038 14.5 0.1 1.0 1 0 0 1 1 1 0 Oestrogen receptor Androgen_recep PF02166.16 NODE_79815_length_198_cov_1.785276_g71874_i0reverse_frame_1 - 2 7.2 8.9 2.2 7.0 8.9 1.0 1 0 0 1 1 1 0 Androgen receptor CD34_antigen PF06365.12 NODE_79810_length_198_cov_1.809816_g71869_i0reverse_frame_1 - 0.057 13.0 0.0 0.057 13.0 0.0 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family PRC PF05239.16 NODE_79807_length_198_cov_1.834356_g71866_i0forward_frame_1 - 0.18 11.9 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 PRC-barrel domain SRCR PF00530.18 NODE_79798_length_198_cov_1.877301_g71857_i0forward_frame_1 - 0.073 13.6 0.2 0.091 13.3 0.2 1.2 1 0 0 1 1 1 0 Scavenger receptor cysteine-rich domain DNA_methylase PF00145.17 NODE_79795_length_198_cov_1.895706_g71854_i0reverse_frame_1 - 4.1e-08 32.9 0.0 4.5e-08 32.8 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase WCCH PF03716.14 NODE_79786_length_198_cov_1.944785_g71845_i0reverse_frame_1 - 0.035 13.8 4.9 0.035 13.8 4.9 1.9 2 0 0 2 2 2 0 WCCH motif Como_LCP PF02247.16 NODE_79786_length_198_cov_1.944785_g71845_i0reverse_frame_1 - 0.16 10.5 0.3 0.18 10.4 0.3 1.0 1 0 0 1 1 1 0 Large coat protein Arif-1 PF06770.11 NODE_79780_length_198_cov_1.957055_g71839_i0forward_frame_1 - 0.013 15.2 0.2 0.013 15.2 0.2 1.0 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) DUF3678 PF12435.8 NODE_79777_length_198_cov_1.963190_g71836_i0forward_frame_1 - 0.14 11.6 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) P63C PF10546.9 NODE_79746_length_198_cov_2.355828_g71805_i0reverse_frame_1 - 0.1 13.2 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 P63C domain Pkinase PF00069.25 NODE_79746_length_198_cov_2.355828_g71805_i0forward_frame_1 - 4e-13 49.3 0.0 4.2e-13 49.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_79746_length_198_cov_2.355828_g71805_i0forward_frame_1 - 4e-10 39.4 0.0 4e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase zf-C3HC PF07967.13 NODE_79745_length_198_cov_2.368098_g71804_i0reverse_frame_1 - 0.18 11.9 0.6 0.22 11.6 0.2 1.4 2 0 0 2 2 2 0 C3HC zinc finger-like LCD1 PF09798.9 NODE_79739_length_198_cov_2.441718_g71798_i0reverse_frame_1 - 0.023 13.2 0.6 0.026 13.1 0.6 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein PPR_2 PF13041.6 NODE_79738_length_198_cov_2.441718_g71797_i0reverse_frame_1 - 3.2e-08 33.6 0.0 0.0011 19.1 0.0 2.0 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_79738_length_198_cov_2.441718_g71797_i0reverse_frame_1 - 0.002 18.1 0.0 0.0023 18.0 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 NODE_79738_length_198_cov_2.441718_g71797_i0reverse_frame_1 - 0.0024 18.0 0.1 0.01 16.0 0.0 1.8 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 NODE_79738_length_198_cov_2.441718_g71797_i0reverse_frame_1 - 0.011 15.4 0.0 0.021 14.5 0.0 1.5 2 0 0 2 2 2 0 PPR repeat Trigger_C PF05698.14 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.0023 17.9 1.0 0.0026 17.8 1.0 1.2 1 0 0 1 1 1 1 Bacterial trigger factor protein (TF) C-terminus FlaC_arch PF05377.11 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.0026 18.1 1.2 0.0031 17.9 1.2 1.2 1 0 0 1 1 1 1 Flagella accessory protein C (FlaC) LPP PF04728.13 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.004 17.5 0.7 0.0053 17.1 0.7 1.2 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TolA_bind_tri PF16331.5 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.007 16.4 1.5 0.0088 16.1 1.5 1.2 1 0 0 1 1 1 1 TolA binding protein trimerisation NPV_P10 PF05531.12 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.0085 16.5 0.7 0.0098 16.3 0.7 1.2 1 0 0 1 1 1 1 Nucleopolyhedrovirus P10 protein Cep57_CLD_2 PF14197.6 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.012 15.6 0.1 0.025 14.6 0.1 1.5 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 CCDC92 PF14916.6 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.012 15.3 1.6 0.19 11.5 0.5 2.1 1 1 1 2 2 2 0 Coiled-coil domain of unknown function Sec34 PF04136.15 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.014 15.3 1.0 0.02 14.8 1.0 1.3 1 1 0 1 1 1 0 Sec34-like family bZIP_1 PF00170.21 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.023 14.8 0.4 0.039 14.1 0.4 1.3 1 0 0 1 1 1 0 bZIP transcription factor Fungal_TACC PF12709.7 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.024 15.0 1.5 0.049 14.1 1.5 1.5 1 1 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins CENP-H PF05837.12 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.027 14.9 0.5 0.028 14.8 0.5 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Spc24 PF08286.11 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.051 13.8 0.9 0.06 13.6 0.9 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DASH_Dad4 PF08650.10 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.053 13.5 0.3 0.067 13.2 0.3 1.1 1 0 0 1 1 1 0 DASH complex subunit Dad4 DivIC PF04977.15 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.084 12.7 2.1 0.11 12.3 2.1 1.4 1 1 0 1 1 1 0 Septum formation initiator SlyX PF04102.12 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.093 13.4 1.3 0.14 12.8 1.3 1.4 1 1 0 1 1 1 0 SlyX TMEM239 PF15841.5 NODE_79731_length_198_cov_2.619632_g71790_i0forward_frame_1 - 0.0059 16.5 0.4 0.0063 16.4 0.4 1.0 1 0 0 1 1 1 1 Transmembrane protein 239 family E1-E2_ATPase PF00122.20 NODE_79729_length_198_cov_2.699387_g71788_i0reverse_frame_1 - 0.17 11.4 0.1 0.19 11.3 0.1 1.0 1 0 0 1 1 1 0 E1-E2 ATPase DUF3527 PF12043.8 NODE_79728_length_198_cov_2.705521_g71787_i0reverse_frame_1 - 0.74 9.3 2.2 0.75 9.3 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3527) cNMP_binding PF00027.29 NODE_79722_length_198_cov_2.785276_g71781_i0reverse_frame_1 - 0.0022 18.0 0.0 0.0027 17.7 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF4201 PF13870.6 NODE_79722_length_198_cov_2.785276_g71781_i0reverse_frame_1 - 0.0027 17.5 0.0 0.0028 17.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) DUF5549 PF17703.1 NODE_79714_length_198_cov_2.981595_g71773_i0reverse_frame_1 - 0.19 11.3 2.5 0.22 11.2 2.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5549) Toxin_2 PF00451.19 NODE_79712_length_198_cov_3.085890_g71771_i0forward_frame_1 - 0.62 10.4 4.8 0.24 11.7 2.5 1.5 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 Lipase_3 PF01764.25 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 1.3e-13 51.0 0.0 1.3e-13 51.0 0.0 1.0 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.017 14.9 0.0 0.018 14.8 0.0 1.1 1 0 0 1 1 1 0 PGAP1-like protein DUF676 PF05057.14 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.034 13.6 0.1 0.034 13.6 0.1 1.0 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Palm_thioest PF02089.15 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.057 13.2 0.0 0.059 13.2 0.0 1.0 1 0 0 1 1 1 0 Palmitoyl protein thioesterase Abhydrolase_6 PF12697.7 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.1 13.2 0.0 0.1 13.2 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_8 PF06259.12 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.11 12.1 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase DUF2974 PF11187.8 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.14 11.7 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) ScdA_N PF04405.14 NODE_79703_length_198_cov_5.803681_g71762_i0forward_frame_1 - 0.075 12.7 0.0 0.093 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) POM121 PF15229.6 NODE_79691_length_198_cov_26.147239_g71750_i0reverse_frame_1 - 0.0058 16.3 3.7 0.0061 16.2 3.7 1.1 1 0 0 1 1 1 1 POM121 family FixQ PF05545.11 NODE_79690_length_198_cov_26.453988_g71749_i0forward_frame_1 - 0.023 14.6 0.8 0.031 14.2 0.8 1.2 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ FTO_NTD PF12933.7 NODE_79678_length_198_cov_36.312883_g71737_i0reverse_frame_1 - 0.012 14.8 0.0 0.013 14.7 0.0 1.1 1 0 0 1 1 1 0 FTO catalytic domain UPF0239 PF06783.11 NODE_79677_length_198_cov_36.417178_g71736_i0forward_frame_1 - 0.059 13.6 0.7 0.069 13.3 0.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Acetyltransf_7 PF13508.7 NODE_79675_length_198_cov_37.638037_g71734_i0reverse_frame_1 - 0.16 12.4 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain SAMP PF05924.11 NODE_79672_length_198_cov_39.061350_g71731_i0forward_frame_1 - 0.79 9.1 5.3 2.4 7.5 5.3 1.7 1 1 0 1 1 1 0 SAMP Motif PhoPQ_related PF10142.9 NODE_79662_length_198_cov_47.122699_g71721_i0reverse_frame_1 - 0.062 12.0 0.1 0.067 11.8 0.1 1.0 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein V_ATPase_I PF01496.19 NODE_79662_length_198_cov_47.122699_g71721_i0forward_frame_1 - 5.2 4.9 6.1 5.7 4.7 6.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Transglut_core PF01841.19 NODE_79659_length_198_cov_54.907975_g71718_i0reverse_frame_1 - 0.12 12.8 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Transglutaminase-like superfamily DNA_pol3_theta PF06440.11 NODE_79642_length_198_cov_80.662577_g71701_i0reverse_frame_1 - 0.077 12.7 0.1 0.094 12.4 0.1 1.4 1 1 0 1 1 1 0 DNA polymerase III, theta subunit TMEM101 PF15111.6 NODE_79641_length_198_cov_85.196319_g71700_i0reverse_frame_1 - 0.052 13.1 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 TMEM101 protein family Ribosomal_S19 PF00203.21 NODE_79636_length_198_cov_95.711656_g71695_i0reverse_frame_1 - 1.9e-09 37.3 1.9 3.1e-09 36.6 0.1 1.9 2 0 0 2 2 2 1 Ribosomal protein S19 DUF5463 PF17551.2 NODE_79632_length_198_cov_141.024540_g71691_i0reverse_frame_1 - 0.097 12.6 0.2 0.14 12.1 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5463) Merozoite_SPAM PF07133.11 NODE_79631_length_198_cov_144.030675_g71690_i0reverse_frame_1 - 8.1 6.4 30.7 8.5 6.3 30.7 1.0 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) SAYSvFN PF10260.9 NODE_79623_length_198_cov_284.969325_g71682_i0reverse_frame_1 - 0.0015 18.4 0.3 0.0019 18.1 0.3 1.2 1 0 0 1 1 1 1 Uncharacterized conserved domain (SAYSvFN) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks374.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks374.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks374.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks374.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NOP19 PF10863.8 NODE_79612_length_198_cov_45371.496933_g71671_i0reverse_frame_1 - 0.082 12.7 0.1 0.089 12.6 0.1 1.1 1 0 0 1 1 1 0 Nucleolar protein 19 Tail_spike_N PF18668.1 NODE_79609_length_199_cov_0.737805_g71668_i0reverse_frame_3 - 0.032 14.1 0.4 0.044 13.6 0.4 1.2 1 0 0 1 1 1 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain DUF5122 PF17164.4 NODE_79606_length_199_cov_0.847561_g71665_i0forward_frame_3 - 0.004 17.4 0.0 0.009 16.3 0.0 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF5122) beta-propeller Perm-CXXC PF15629.6 NODE_79601_length_199_cov_0.957317_g71660_i0reverse_frame_3 - 0.0024 18.1 0.1 0.0024 18.1 0.1 1.9 2 0 0 2 2 2 1 Permuted single zf-CXXC unit HCMV_UL139 PF12507.8 NODE_79601_length_199_cov_0.957317_g71660_i0forward_frame_2 - 0.11 12.9 0.1 0.12 12.8 0.1 1.1 1 0 0 1 1 1 0 Human Cytomegalovirus UL139 protein DUF3485 PF11984.8 NODE_79600_length_199_cov_0.957317_g71659_i0reverse_frame_3 - 0.14 11.9 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3485) Dynein_IC2 PF11540.8 NODE_79598_length_199_cov_0.963415_g71657_i0reverse_frame_2 - 0.056 13.4 0.8 0.078 13.0 0.8 1.2 1 0 0 1 1 1 0 Cytoplasmic dynein 1 intermediate chain 2 Gag_p12 PF01141.18 NODE_79598_length_199_cov_0.963415_g71657_i0forward_frame_3 - 0.029 14.7 0.2 0.037 14.4 0.2 1.1 1 0 0 1 1 1 0 Gag polyprotein, inner coat protein p12 DUF1658 PF07871.11 NODE_79597_length_199_cov_0.963415_g71656_i0forward_frame_2 - 0.31 11.0 2.9 0.84 9.7 2.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1658) GSHPx PF00255.19 NODE_79588_length_199_cov_0.969512_g71647_i0forward_frame_2 - 0.11 12.0 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Glutathione peroxidase Pox_A28 PF04584.14 NODE_79587_length_199_cov_0.969512_g71646_i0forward_frame_3 - 0.0017 18.6 0.1 0.0017 18.5 0.1 1.0 1 0 0 1 1 1 1 Poxvirus A28 family DUF4357 PF14267.6 NODE_79586_length_199_cov_0.975610_g71645_i0reverse_frame_3 - 0.12 12.3 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4357) DUF5407 PF17401.2 NODE_79586_length_199_cov_0.975610_g71645_i0forward_frame_2 - 0.11 12.7 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5407) Chordopox_G2 PF05796.12 NODE_79585_length_199_cov_0.975610_g71644_i0forward_frame_2 - 0.028 13.8 0.0 0.032 13.7 0.0 1.0 1 0 0 1 1 1 0 Chordopoxvirus protein G2 ERGIC_N PF13850.6 NODE_79579_length_199_cov_0.975610_g71638_i0reverse_frame_2 - 0.0077 16.6 0.2 0.0083 16.5 0.2 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DIE2_ALG10 PF04922.12 NODE_79577_length_199_cov_0.975610_g71636_i0forward_frame_3 - 0.14 11.4 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 DIE2/ALG10 family RHD_dimer PF16179.5 NODE_79576_length_199_cov_0.975610_g71635_i0forward_frame_2 - 0.084 12.9 0.0 0.097 12.7 0.0 1.1 1 0 0 1 1 1 0 Rel homology dimerisation domain Utp21 PF04192.12 NODE_79575_length_199_cov_0.975610_g71634_i0reverse_frame_2 - 0.08 12.4 0.0 0.089 12.3 0.0 1.1 1 0 0 1 1 1 0 Utp21 specific WD40 associated putative domain PyrI_C PF02748.15 NODE_79568_length_199_cov_0.975610_g71627_i0reverse_frame_3 - 0.0039 17.1 0.5 0.0059 16.5 0.5 1.3 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain Thioredoxin_3 PF13192.6 NODE_79567_length_199_cov_0.975610_g71626_i0reverse_frame_3 - 0.22 11.6 0.0 0.3 11.2 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin domain Tannase PF07519.11 NODE_79567_length_199_cov_0.975610_g71626_i0reverse_frame_2 - 0.11 11.4 0.2 0.11 11.3 0.2 1.0 1 0 0 1 1 1 0 Tannase and feruloyl esterase EELM2 PF15863.5 NODE_79564_length_199_cov_0.975610_g71623_i0reverse_frame_3 - 0.048 13.8 0.2 0.052 13.7 0.2 1.0 1 0 0 1 1 1 0 Extended EGL-27 and MTA1 homology domain Rad21_Rec8 PF04824.16 NODE_79562_length_199_cov_0.975610_g71621_i0reverse_frame_3 - 0.14 11.4 0.1 0.2 11.0 0.1 1.2 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein DUF4133 PF13571.6 NODE_79561_length_199_cov_0.975610_g71620_i0forward_frame_2 - 3.8 7.9 7.4 2.4 8.5 5.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4133) Z1 PF10593.9 NODE_79559_length_199_cov_0.975610_g71618_i0reverse_frame_3 - 1.3e-08 34.6 0.0 1.5e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Z1 domain AAA_18 PF13238.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 6.3e-13 49.4 0.0 6.6e-13 49.3 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 1.3e-06 28.9 0.0 1.3e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 1.1e-05 25.8 0.1 1.5e-05 25.5 0.1 1.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.00012 22.3 0.0 0.00013 22.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.00031 20.7 0.3 0.00035 20.5 0.2 1.2 1 1 0 1 1 1 1 NTPase AAA_33 PF13671.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.00059 20.0 0.0 0.00059 20.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain ADK PF00406.22 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.00072 19.7 0.0 0.00076 19.6 0.0 1.2 1 0 0 1 1 1 1 Adenylate kinase ATP_bind_1 PF03029.17 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0014 18.5 0.2 0.0017 18.2 0.2 1.2 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0019 18.5 0.3 0.0022 18.3 0.2 1.3 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0055 16.8 0.0 0.0055 16.8 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0057 16.6 0.0 0.0068 16.3 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase Viral_helicase1 PF01443.18 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0072 16.1 0.0 0.0073 16.1 0.0 1.0 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0087 15.8 0.0 0.0087 15.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0094 16.3 0.0 0.0094 16.3 0.0 1.2 1 0 0 1 1 1 1 RNA helicase AAA_16 PF13191.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.013 15.9 0.2 0.013 15.9 0.2 1.2 1 1 0 1 1 1 0 AAA ATPase domain KTI12 PF08433.10 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.014 14.8 0.0 0.014 14.8 0.0 1.1 1 0 0 1 1 1 0 Chromatin associated protein KTI12 MeaB PF03308.16 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.022 13.7 0.1 0.024 13.6 0.1 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.025 14.2 0.1 0.031 13.9 0.1 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NACHT PF05729.12 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.025 14.5 0.0 0.031 14.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_14 PF13173.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.027 14.5 0.0 0.031 14.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.027 13.8 0.0 0.029 13.7 0.0 1.2 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.03 14.1 0.0 0.03 14.1 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein ABC_tran PF00005.27 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.032 14.7 0.0 0.032 14.7 0.0 1.1 1 0 0 1 1 1 0 ABC transporter AAA_3 PF07726.11 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.035 14.0 0.0 0.044 13.6 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.037 13.8 0.0 0.044 13.5 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.037 14.0 0.0 0.038 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Septin PF00735.18 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.056 12.7 0.0 0.056 12.7 0.0 1.1 1 0 0 1 1 1 0 Septin Cytidylate_kin PF02224.18 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.066 12.9 0.0 0.066 12.9 0.0 1.1 1 0 0 1 1 1 0 Cytidylate kinase AAA_25 PF13481.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.076 12.6 0.3 0.083 12.5 0.3 1.3 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.078 13.0 0.5 0.12 12.4 0.2 1.5 1 1 1 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.09 11.8 0.0 0.097 11.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein PduV-EutP PF10662.9 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.099 12.4 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_26 PF13500.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.1 12.4 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.1 12.3 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.11 12.0 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B Ploopntkinase3 PF18751.1 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.13 12.1 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_19 PF13245.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.14 12.5 0.6 0.17 12.2 0.6 1.2 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.14 10.7 0.0 0.15 10.6 0.0 1.0 1 0 0 1 1 1 0 AAA domain DnaB_C PF03796.15 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.16 11.3 0.0 0.16 11.3 0.0 1.2 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain AAA_30 PF13604.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.16 11.6 0.3 0.21 11.3 0.3 1.4 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.16 11.5 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ArsA_ATPase PF02374.15 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.17 11.0 0.4 0.21 10.7 0.4 1.3 1 1 0 1 1 1 0 Anion-transporting ATPase Torsin PF06309.11 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_3 - 0.013 15.6 0.2 0.014 15.5 0.2 1.0 1 0 0 1 1 1 0 Torsin XhlA PF10779.9 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.0068 16.6 2.4 0.0097 16.1 2.4 1.2 1 0 0 1 1 1 1 Haemolysin XhlA SLATT_6 PF18169.1 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.025 14.2 1.3 0.03 13.9 1.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 zf-SAP30 PF13866.6 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.082 13.0 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 SAP30 zinc-finger SPECT1 PF18680.1 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.097 12.3 5.5 0.15 11.7 5.5 1.5 1 1 0 1 1 1 0 Plasmodium host cell traversal SPECT1 SH2_2 PF14633.6 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.1 12.0 4.4 0.11 11.9 4.4 1.0 1 0 0 1 1 1 0 SH2 domain PCSK9_C2 PF18464.1 NODE_79544_length_199_cov_0.975610_g71603_i0reverse_frame_2 - 0.12 12.4 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Sigma54_activ_2 PF14532.6 NODE_79542_length_199_cov_0.975610_g71601_i0forward_frame_3 - 0.089 12.9 0.0 0.096 12.8 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF348 PF03990.14 NODE_79540_length_199_cov_0.975610_g71599_i0forward_frame_3 - 0.23 11.3 0.0 0.31 10.8 0.0 1.2 1 0 0 1 1 1 0 G5-linked-Ubiquitin-like domain He_PIG_assoc PF10632.9 NODE_79535_length_199_cov_0.975610_g71594_i0reverse_frame_3 - 0.18 11.5 0.2 0.18 11.5 0.2 1.8 3 0 0 3 3 3 0 He_PIG associated, NEW1 domain of bacterial glycohydrolase Opi1 PF08618.10 NODE_79528_length_199_cov_0.981707_g71587_i0reverse_frame_3 - 0.11 11.7 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Transcription factor Opi1 RskA PF10099.9 NODE_79528_length_199_cov_0.981707_g71587_i0reverse_frame_2 - 0.033 14.5 1.9 0.038 14.3 1.9 1.0 1 0 0 1 1 1 0 Anti-sigma-K factor rskA CYTL1 PF15153.6 NODE_79527_length_199_cov_0.987805_g71586_i0forward_frame_2 - 0.083 12.8 0.0 0.098 12.6 0.0 1.1 1 0 0 1 1 1 0 Cytokine-like protein 1 GSHPx PF00255.19 NODE_79525_length_199_cov_0.993902_g71584_i0forward_frame_2 - 0.061 12.9 0.3 0.071 12.7 0.3 1.1 1 0 0 1 1 1 0 Glutathione peroxidase Circo_capsid PF02443.15 NODE_79522_length_199_cov_1.012195_g71581_i0forward_frame_3 - 8 6.0 12.8 8.3 5.9 12.8 1.1 1 0 0 1 1 1 0 Circovirus capsid protein TT_ORF1 PF02956.14 NODE_79522_length_199_cov_1.012195_g71581_i0forward_frame_3 - 9.2 4.8 13.5 9.1 4.8 13.5 1.0 1 0 0 1 1 1 0 TT viral orf 1 Toxin_2 PF00451.19 NODE_79520_length_199_cov_1.024390_g71579_i0reverse_frame_3 - 0.083 13.2 1.4 0.12 12.7 1.4 1.2 1 0 0 1 1 1 0 Scorpion short toxin, BmKK2 DUF1388 PF07142.12 NODE_79520_length_199_cov_1.024390_g71579_i0forward_frame_3 - 0.61 10.1 5.8 0.23 11.4 1.8 2.4 3 1 0 3 3 3 0 Repeat of unknown function (DUF1388) DUF3873 PF12989.7 NODE_79513_length_199_cov_1.054878_g71572_i0reverse_frame_2 - 0.12 12.8 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3873) MFS_1 PF07690.16 NODE_79512_length_199_cov_1.060976_g71571_i0forward_frame_3 - 0.00016 20.7 0.4 0.00018 20.6 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily NOZZLE PF08744.10 NODE_79499_length_199_cov_1.121951_g71558_i0reverse_frame_3 - 0.036 13.6 3.0 0.041 13.4 3.0 1.0 1 0 0 1 1 1 0 Plant transcription factor NOZZLE Antimicrobial10 PF08105.11 NODE_79499_length_199_cov_1.121951_g71558_i0reverse_frame_2 - 0.3 11.2 2.7 0.41 10.7 0.1 2.1 2 1 0 2 2 2 0 Metchnikowin family Thymopoietin PF08198.11 NODE_79496_length_199_cov_1.146341_g71555_i0reverse_frame_3 - 0.00076 19.0 0.0 0.00094 18.7 0.0 1.2 1 0 0 1 1 1 1 Thymopoietin protein Dynactin_p62 PF05502.13 NODE_79494_length_199_cov_1.164634_g71553_i0forward_frame_3 - 0.22 10.3 0.0 0.24 10.1 0.0 1.0 1 0 0 1 1 1 0 Dynactin p62 family YopE PF03545.13 NODE_79492_length_199_cov_1.170732_g71551_i0reverse_frame_2 - 0.0041 17.2 0.1 0.0072 16.5 0.1 1.4 1 1 0 1 1 1 1 Yersinia virulence determinant (YopE) Herpes_pp85 PF04637.12 NODE_79491_length_199_cov_1.176829_g71550_i0forward_frame_3 - 0.042 12.3 0.8 0.049 12.1 0.8 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF4131 PF13567.6 NODE_79491_length_199_cov_1.176829_g71550_i0forward_frame_3 - 0.05 13.2 1.6 0.056 13.1 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) E1-E2_ATPase PF00122.20 NODE_79491_length_199_cov_1.176829_g71550_i0forward_frame_3 - 0.45 10.0 2.3 0.51 9.8 2.3 1.0 1 0 0 1 1 1 0 E1-E2 ATPase DUF1180 PF06679.12 NODE_79491_length_199_cov_1.176829_g71550_i0forward_frame_3 - 0.46 10.9 4.5 0.52 10.7 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) PX PF00787.24 NODE_79490_length_199_cov_1.195122_g71549_i0reverse_frame_3 - 0.051 13.6 0.1 0.057 13.4 0.1 1.2 1 0 0 1 1 1 0 PX domain WavE PF07507.11 NODE_79489_length_199_cov_1.195122_g71548_i0reverse_frame_2 - 0.026 13.7 0.0 0.028 13.6 0.0 1.0 1 0 0 1 1 1 0 WavE lipopolysaccharide synthesis MauJ PF17419.2 NODE_79489_length_199_cov_1.195122_g71548_i0reverse_frame_2 - 0.094 12.2 0.0 0.096 12.1 0.0 1.0 1 0 0 1 1 1 0 Methylamine utilization protein MauJ CRCB PF02537.15 NODE_79489_length_199_cov_1.195122_g71548_i0forward_frame_2 - 0.0021 18.3 0.1 0.0023 18.2 0.1 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) DDE_Tnp_4 PF13359.6 NODE_79485_length_199_cov_1.207317_g71544_i0forward_frame_3 - 0.036 13.7 0.2 0.039 13.6 0.2 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease P2 PF07194.11 NODE_79484_length_199_cov_1.207317_g71543_i0reverse_frame_2 - 0.17 12.0 0.0 0.23 11.5 0.0 1.1 1 0 0 1 1 1 0 P2 response regulator binding domain DUF4996 PF16387.5 NODE_79480_length_199_cov_1.213415_g71539_i0reverse_frame_2 - 0.045 14.2 0.3 0.049 14.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function Defensin_5 PF18251.1 NODE_79477_length_199_cov_1.219512_g71536_i0reverse_frame_3 - 0.006 16.6 3.2 0.0099 15.9 3.2 1.4 1 0 0 1 1 1 1 Fungal defensin Copsin Bunya_NS-S PF01104.17 NODE_79475_length_199_cov_1.219512_g71534_i0reverse_frame_3 - 0.073 12.9 0.1 0.11 12.4 0.1 1.3 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s PTS_EIIC PF02378.18 NODE_79475_length_199_cov_1.219512_g71534_i0forward_frame_3 - 0.00056 19.0 1.7 0.0006 18.9 1.7 1.0 1 0 0 1 1 1 1 Phosphotransferase system, EIIC MCPsignal PF00015.21 NODE_79473_length_199_cov_1.219512_g71532_i0forward_frame_3 - 0.0072 16.2 0.1 0.0077 16.1 0.1 1.1 1 0 0 1 1 1 1 Methyl-accepting chemotaxis protein (MCP) signalling domain L71 PF02448.15 NODE_79472_length_199_cov_1.219512_g71531_i0reverse_frame_3 - 0.085 13.3 0.1 0.12 12.8 0.1 1.2 1 1 0 1 1 1 0 L71 family DUF1016_N PF17761.1 NODE_79469_length_199_cov_1.219512_g71528_i0reverse_frame_2 - 0.067 13.3 0.1 0.084 13.0 0.1 1.1 1 0 0 1 1 1 0 DUF1016 N-terminal domain UIM PF02809.20 NODE_79468_length_199_cov_1.219512_g71527_i0forward_frame_3 - 0.06 13.3 0.1 0.084 12.8 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin interaction motif DUF5490 PF17593.2 NODE_79466_length_199_cov_1.225610_g71525_i0forward_frame_2 - 0.17 11.9 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5490) Peroxidase_ext PF11895.8 NODE_79465_length_199_cov_1.237805_g71524_i0reverse_frame_3 - 0.08 12.9 0.2 0.093 12.7 0.2 1.3 1 1 0 1 1 1 0 Fungal peroxidase extension region PDH_E1_M PF17831.1 NODE_79464_length_199_cov_1.243902_g71523_i0reverse_frame_2 - 1.8e-23 83.3 0.0 1.8e-23 83.3 0.0 1.0 1 0 0 1 1 1 1 Pyruvate dehydrogenase E1 component middle domain CotJA PF11007.8 NODE_79459_length_199_cov_1.292683_g71518_i0reverse_frame_2 - 0.13 12.2 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Spore coat associated protein JA (CotJA) Aconitase PF00330.20 NODE_79450_length_199_cov_1.335366_g71509_i0reverse_frame_3 - 9e-16 57.9 0.0 9.3e-16 57.9 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) TMEM43 PF07787.12 NODE_79441_length_199_cov_1.353659_g71500_i0forward_frame_3 - 0.5 9.7 2.6 0.48 9.8 2.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 ABC2_membrane_3 PF12698.7 NODE_79441_length_199_cov_1.353659_g71500_i0forward_frame_3 - 1.3 8.0 6.9 1.7 7.7 6.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Synthase_beta PF11421.8 NODE_79440_length_199_cov_1.353659_g71499_i0reverse_frame_2 - 1.1 10.1 5.1 0.78 10.5 3.3 1.7 1 1 1 2 2 2 0 ATP synthase F1 beta subunit HAGH_C PF16123.5 NODE_79435_length_199_cov_1.378049_g71494_i0forward_frame_2 - 0.11 13.0 0.1 0.17 12.4 0.1 1.3 1 0 0 1 1 1 0 Hydroxyacylglutathione hydrolase C-terminus Rax2 PF12768.7 NODE_79433_length_199_cov_1.390244_g71492_i0reverse_frame_2 - 0.0082 15.6 0.0 0.0083 15.6 0.0 1.1 1 0 0 1 1 1 1 Cortical protein marker for cell polarity PsbM PF05151.12 NODE_79433_length_199_cov_1.390244_g71492_i0reverse_frame_2 - 0.26 11.1 5.0 0.41 10.5 5.0 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre M protein (PsbM) DUF3149 PF11346.8 NODE_79433_length_199_cov_1.390244_g71492_i0reverse_frame_2 - 0.47 10.1 2.7 0.71 9.5 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) Cas_Cas4 PF01930.17 NODE_79432_length_199_cov_1.402439_g71491_i0forward_frame_3 - 0.14 12.2 0.0 0.15 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF83 NPC1_N PF16414.5 NODE_79426_length_199_cov_1.445122_g71485_i0forward_frame_3 - 0.0076 15.8 1.0 0.0076 15.8 1.0 1.0 1 0 0 1 1 1 1 Niemann-Pick C1 N terminus DUF2407 PF10302.9 NODE_79416_length_199_cov_1.457317_g71475_i0reverse_frame_2 - 0.049 14.2 0.2 0.055 14.0 0.2 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Big_1 PF02369.16 NODE_79413_length_199_cov_1.463415_g71472_i0forward_frame_2 - 0.0017 18.4 0.0 0.0022 18.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 1) Prim_Zn_Ribbon PF08273.12 NODE_79411_length_199_cov_1.463415_g71470_i0reverse_frame_3 - 0.0089 16.3 0.0 0.014 15.7 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding domain of primase-helicase ApoM PF11032.8 NODE_79408_length_199_cov_1.463415_g71467_i0forward_frame_3 - 0.027 14.2 0.0 0.03 14.0 0.0 1.0 1 0 0 1 1 1 0 ApoM domain MORN PF02493.20 NODE_79407_length_199_cov_1.463415_g71466_i0forward_frame_3 - 7.2e-16 57.1 13.4 7.2e-10 38.2 1.7 3.1 3 0 0 3 3 3 3 MORN repeat DUF2543 PF10820.8 NODE_79402_length_199_cov_1.463415_g71461_i0reverse_frame_2 - 0.12 12.6 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2543) DUF4181 PF13789.6 NODE_79396_length_199_cov_1.469512_g71455_i0forward_frame_2 - 0.036 14.3 1.5 0.041 14.2 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) DUF3433 PF11915.8 NODE_79390_length_199_cov_1.493902_g71449_i0reverse_frame_3 - 0.053 14.0 0.0 0.059 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3433) Nt_Gln_amidase PF09764.9 NODE_79384_length_199_cov_1.530488_g71443_i0reverse_frame_3 - 0.0058 16.3 0.7 0.0066 16.1 0.7 1.1 1 0 0 1 1 1 1 N-terminal glutamine amidase Anoctamin PF04547.12 NODE_79384_length_199_cov_1.530488_g71443_i0forward_frame_3 - 2.4e-20 72.8 10.2 2.7e-20 72.6 10.2 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel RSN1_7TM PF02714.15 NODE_79384_length_199_cov_1.530488_g71443_i0forward_frame_3 - 0.0045 16.4 5.5 0.005 16.2 5.5 1.1 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate Sarcolipin PF05366.11 NODE_79379_length_199_cov_1.554878_g71438_i0reverse_frame_2 - 0.018 14.7 0.3 0.034 13.9 0.3 1.5 1 0 0 1 1 1 0 Sarcolipin DUF3413 PF11893.8 NODE_79377_length_199_cov_1.560976_g71436_i0forward_frame_2 - 0.014 14.5 2.3 0.016 14.4 2.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) Sel1 PF08238.12 NODE_79366_length_199_cov_1.640244_g71425_i0forward_frame_3 - 1e-07 32.4 1.1 8.1e-06 26.3 0.6 2.1 2 0 0 2 2 2 2 Sel1 repeat DUF3822 PF12864.7 NODE_79361_length_199_cov_1.664634_g71420_i0forward_frame_2 - 0.027 13.6 0.5 0.029 13.5 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3822) DUF4716 PF15837.5 NODE_79359_length_199_cov_1.695122_g71418_i0reverse_frame_2 - 0.64 10.1 4.0 0.27 11.3 0.7 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4716) HTH_OrfB_IS605 PF12323.8 NODE_79357_length_199_cov_1.701220_g71416_i0reverse_frame_2 - 0.086 12.3 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain AKAP7_NLS PF10469.9 NODE_79355_length_199_cov_1.707317_g71414_i0reverse_frame_3 - 0.014 15.3 1.7 0.016 15.1 1.7 1.0 1 0 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain Myb_DNA-binding PF00249.31 NODE_79354_length_199_cov_1.707317_g71413_i0forward_frame_2 - 1.2e-15 57.5 0.4 1.3e-15 57.3 0.4 1.1 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_79354_length_199_cov_1.707317_g71413_i0forward_frame_2 - 2.2e-06 27.5 0.1 2.3e-06 27.4 0.1 1.2 1 0 0 1 1 1 1 Myb DNA-binding like Myb_DNA-bind_6 PF13921.6 NODE_79354_length_199_cov_1.707317_g71413_i0forward_frame_2 - 7.6e-05 22.9 0.1 8e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain Con-6 PF10346.9 NODE_79354_length_199_cov_1.707317_g71413_i0forward_frame_2 - 0.12 12.4 0.2 0.24 11.5 0.2 1.4 1 0 0 1 1 1 0 Conidiation protein 6 DUF1477 PF07346.11 NODE_79353_length_199_cov_1.719512_g71412_i0forward_frame_3 - 0.0046 17.2 0.1 0.0046 17.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1477) UPF0181 PF03701.14 NODE_79348_length_199_cov_1.768293_g71407_i0forward_frame_2 - 6.6e-14 51.3 1.4 8.1e-14 51.0 1.4 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0181) DUF4219 PF13961.6 NODE_79344_length_199_cov_1.780488_g71403_i0forward_frame_3 - 0.04 13.6 0.9 0.056 13.1 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4219) DUF3719 PF12516.8 NODE_79342_length_199_cov_1.817073_g71401_i0forward_frame_3 - 0.24 11.1 1.7 0.32 10.7 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) cNMP_binding PF00027.29 NODE_79341_length_199_cov_1.817073_g71400_i0reverse_frame_3 - 7.4e-09 35.6 0.0 7.7e-09 35.5 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF1077 PF06417.12 NODE_79341_length_199_cov_1.817073_g71400_i0reverse_frame_2 - 0.1 12.6 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) AmoC PF04896.12 NODE_79341_length_199_cov_1.817073_g71400_i0forward_frame_3 - 0.038 13.3 0.2 0.038 13.3 0.2 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C Ribosomal_L5_C PF00673.21 NODE_79335_length_199_cov_1.853659_g71394_i0reverse_frame_3 - 0.16 12.2 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 ribosomal L5P family C-terminus TPR_2 PF07719.17 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 7.1e-12 44.5 0.6 2.1e-06 27.4 0.4 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 2.3e-11 43.0 0.6 1.3e-06 27.9 0.4 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 7.9e-11 41.5 0.3 4.3e-06 26.3 0.1 2.0 1 1 1 2 2 2 2 TPR repeat TPR_8 PF13181.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 2.9e-07 30.2 0.2 0.00022 21.2 0.2 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 9.9e-06 25.8 0.4 2.1e-05 24.7 0.4 1.6 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 4.9e-05 23.1 0.2 0.075 13.1 0.2 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.00022 21.6 0.2 0.00038 20.9 0.2 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.00026 21.6 0.1 0.00033 21.2 0.1 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.00037 20.7 0.4 0.0026 18.0 0.2 2.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.00069 20.2 0.0 0.068 14.0 0.0 2.0 1 1 1 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.00087 19.5 0.5 0.00097 19.3 0.5 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.054 14.1 0.1 11 6.9 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Ashwin PF15323.6 NODE_79323_length_199_cov_1.914634_g71382_i0reverse_frame_2 - 0.16 11.9 7.8 0.18 11.8 7.8 1.0 1 0 0 1 1 1 0 Developmental protein DDOST_48kD PF03345.14 NODE_79316_length_199_cov_1.945122_g71375_i0reverse_frame_3 - 1.5e-10 40.5 0.0 1.5e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 Oligosaccharyltransferase 48 kDa subunit beta DRE2_N PF16803.5 NODE_79316_length_199_cov_1.945122_g71375_i0reverse_frame_3 - 0.073 13.3 0.0 0.083 13.1 0.0 1.0 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus FGE-sulfatase PF03781.16 NODE_79315_length_199_cov_1.951220_g71374_i0reverse_frame_3 - 8.9e-05 22.2 0.0 9.5e-05 22.1 0.0 1.0 1 0 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DUF1264 PF06884.11 NODE_79305_length_199_cov_2.042683_g71364_i0reverse_frame_3 - 0.023 14.3 0.1 0.027 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1264) Malic_M PF03949.15 NODE_79304_length_199_cov_2.054878_g71363_i0forward_frame_3 - 2.4e-26 92.6 0.1 2.5e-26 92.5 0.1 1.0 1 0 0 1 1 1 1 Malic enzyme, NAD binding domain Latrophilin PF02354.16 NODE_79302_length_199_cov_2.079268_g71361_i0reverse_frame_2 - 0.14 11.2 0.0 0.14 11.2 0.0 1.0 1 0 0 1 1 1 0 Latrophilin Cytoplasmic C-terminal region RES PF08808.11 NODE_79299_length_199_cov_2.140244_g71358_i0forward_frame_3 - 0.21 11.5 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 RES domain Adeno_E3_14_5 PF04834.12 NODE_79292_length_199_cov_2.195122_g71351_i0reverse_frame_2 - 0.055 14.0 0.1 0.056 14.0 0.1 1.1 1 0 0 1 1 1 0 Early E3 14.5 kDa protein Gp_dh_N PF00044.24 NODE_79292_length_199_cov_2.195122_g71351_i0forward_frame_2 - 0.0019 18.5 0.1 0.0036 17.6 0.1 1.5 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DUF364 PF04016.12 NODE_79292_length_199_cov_2.195122_g71351_i0forward_frame_2 - 0.11 12.1 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Putative heavy-metal chelation YwpF PF14183.6 NODE_79291_length_199_cov_2.201220_g71350_i0forward_frame_2 - 0.12 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 YwpF-like protein CD225 PF04505.12 NODE_79288_length_199_cov_2.225610_g71347_i0reverse_frame_3 - 0.62 10.2 1.6 0.94 9.7 1.6 1.3 1 1 0 1 1 1 0 Interferon-induced transmembrane protein DUF16 PF01519.16 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.0065 16.9 2.4 0.0071 16.8 2.4 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF16 LemA PF04011.12 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.02 14.7 0.9 0.023 14.5 0.9 1.0 1 0 0 1 1 1 0 LemA family PI3K_P85_iSH2 PF16454.5 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.024 14.3 1.7 0.027 14.1 1.7 1.2 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain SPAM PF02090.15 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.053 13.3 1.8 0.064 13.1 1.8 1.1 1 0 0 1 1 1 0 Salmonella surface presentation of antigen gene type M protein DUF2009 PF09418.10 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.094 11.8 0.7 0.094 11.8 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2009) Med20 PF08612.11 NODE_79282_length_199_cov_2.329268_g71341_i0reverse_frame_2 - 0.061 12.7 0.1 0.063 12.6 0.1 1.1 1 0 0 1 1 1 0 TATA-binding related factor (TRF) of subunit 20 of Mediator complex TRADD_N PF09034.10 NODE_79282_length_199_cov_2.329268_g71341_i0reverse_frame_2 - 0.062 13.4 0.2 0.068 13.2 0.2 1.2 1 0 0 1 1 1 0 TRADD, N-terminal domain Phage_integrase PF00589.22 NODE_79275_length_199_cov_2.457317_g71334_i0forward_frame_2 - 6.9e-13 48.8 0.0 7.5e-13 48.6 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family STAS PF01740.21 NODE_79272_length_199_cov_2.506098_g71331_i0reverse_frame_2 - 0.054 13.1 0.3 0.054 13.1 0.3 1.1 1 0 0 1 1 1 0 STAS domain RepA1_leader PF08048.12 NODE_79269_length_199_cov_2.603659_g71328_i0forward_frame_2 - 0.27 11.5 0.8 0.27 11.5 0.8 1.9 2 0 0 2 2 2 0 Tap RepA1 leader peptide PBECR3 PF18812.1 NODE_79267_length_199_cov_2.658537_g71326_i0reverse_frame_3 - 0.051 13.5 0.0 0.053 13.5 0.0 1.1 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 LRR_1 PF00560.33 NODE_79259_length_199_cov_2.774390_g71318_i0reverse_frame_2 - 0.0072 16.7 0.1 0.39 11.5 0.0 2.4 2 0 0 2 2 2 1 Leucine Rich Repeat LRR_6 PF13516.6 NODE_79259_length_199_cov_2.774390_g71318_i0reverse_frame_2 - 0.11 12.6 1.2 5.6 7.3 0.1 2.3 2 0 0 2 2 2 0 Leucine Rich repeat Ephrin_rec_like PF07699.13 NODE_79253_length_199_cov_2.987805_g71312_i0reverse_frame_2 - 0.077 12.8 1.1 0.11 12.3 1.1 1.3 1 0 0 1 1 1 0 Putative ephrin-receptor like Sirohm_synth_C PF14823.6 NODE_79252_length_199_cov_3.006098_g71311_i0forward_frame_3 - 3.7 7.3 6.4 5.4 6.7 6.4 1.2 1 0 0 1 1 1 0 Sirohaem biosynthesis protein C-terminal Prp18 PF02840.15 NODE_79252_length_199_cov_3.006098_g71311_i0forward_frame_2 - 0.057 13.5 0.0 0.062 13.4 0.0 1.1 1 0 0 1 1 1 0 Prp18 domain T6SS_VipA PF05591.12 NODE_79252_length_199_cov_3.006098_g71311_i0forward_frame_2 - 0.065 13.0 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 Pkinase PF00069.25 NODE_79247_length_199_cov_3.140244_g71306_i0reverse_frame_2 - 2.5e-11 43.4 0.0 2.7e-11 43.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_79247_length_199_cov_3.140244_g71306_i0reverse_frame_2 - 0.00058 19.2 0.0 0.00065 19.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_79247_length_199_cov_3.140244_g71306_i0reverse_frame_2 - 0.0032 16.8 0.0 0.0035 16.7 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Alpha-E PF04168.12 NODE_79244_length_199_cov_3.262195_g71303_i0reverse_frame_3 - 0.073 12.8 0.0 0.073 12.8 0.0 1.0 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. Hepar_II_III PF07940.13 NODE_79243_length_199_cov_3.286585_g71302_i0reverse_frame_2 - 0.037 13.7 0.0 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 Heparinase II/III-like protein fn3 PF00041.21 NODE_79243_length_199_cov_3.286585_g71302_i0reverse_frame_2 - 0.045 14.1 0.0 0.052 13.9 0.0 1.1 1 0 0 1 1 1 0 Fibronectin type III domain Dynein_heavy PF03028.15 NODE_79240_length_199_cov_3.310976_g71299_i0forward_frame_3 - 0.088 12.9 0.2 0.1 12.7 0.2 1.0 1 0 0 1 1 1 0 Dynein heavy chain region D6 P-loop domain Transcrip_reg PF01709.20 NODE_79239_length_199_cov_3.420732_g71298_i0forward_frame_3 - 1.6e-10 40.9 0.1 1.6e-10 40.8 0.1 1.0 1 0 0 1 1 1 1 Transcriptional regulator DUF4025 PF13217.6 NODE_79238_length_199_cov_3.493902_g71297_i0reverse_frame_2 - 0.099 12.5 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4025) DUF3678 PF12435.8 NODE_79238_length_199_cov_3.493902_g71297_i0forward_frame_2 - 0.073 12.5 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks375.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks375.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks375.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks375.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:27:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Rhabdo_ncap PF00945.18 NODE_79233_length_199_cov_4.457317_g71292_i0reverse_frame_3 - 0.064 12.1 0.1 0.071 12.0 0.1 1.0 1 0 0 1 1 1 0 Rhabdovirus nucleocapsid protein DUF1601 PF07671.11 NODE_79230_length_199_cov_5.341463_g71289_i0reverse_frame_3 - 0.024 14.5 0.1 0.041 13.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1601) FemAB PF02388.16 NODE_79230_length_199_cov_5.341463_g71289_i0forward_frame_3 - 0.54 9.1 4.8 0.58 9.0 4.8 1.0 1 0 0 1 1 1 0 FemAB family PspA_IM30 PF04012.12 NODE_79220_length_199_cov_23.737805_g71279_i0reverse_frame_2 - 0.031 13.9 7.5 0.035 13.7 7.5 1.0 1 0 0 1 1 1 0 PspA/IM30 family DUF2951 PF11166.8 NODE_79220_length_199_cov_23.737805_g71279_i0reverse_frame_2 - 1.9 8.7 8.0 2.1 8.6 8.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) YajC PF02699.15 NODE_79217_length_199_cov_26.804878_g71276_i0reverse_frame_2 - 0.73 9.8 1.8 0.93 9.4 1.8 1.2 1 0 0 1 1 1 0 Preprotein translocase subunit SARAF PF06682.12 NODE_79216_length_199_cov_27.018293_g71275_i0reverse_frame_2 - 0.086 12.5 0.0 0.089 12.4 0.0 1.0 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis DUF1657 PF07870.11 NODE_79215_length_199_cov_27.487805_g71274_i0forward_frame_3 - 0.073 13.0 1.0 0.1 12.5 0.5 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1657) DUF1657 PF07870.11 NODE_79214_length_199_cov_27.640244_g71273_i0reverse_frame_3 - 0.0076 16.1 0.6 0.1 12.5 0.5 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF1657) DUF3313 PF11769.8 NODE_79214_length_199_cov_27.640244_g71273_i0reverse_frame_3 - 0.063 13.1 0.1 0.074 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3313) GTP_EFTU_D3 PF03143.17 NODE_79213_length_199_cov_29.018293_g71272_i0reverse_frame_3 - 0.049 13.9 1.1 0.068 13.5 1.0 1.4 1 1 1 2 2 2 0 Elongation factor Tu C-terminal domain Chordopox_A30L PF06015.12 NODE_79210_length_199_cov_29.219512_g71269_i0reverse_frame_2 - 0.4 10.5 7.1 0.55 10.1 7.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus A30L protein Anticodon_1 PF08264.13 NODE_79207_length_199_cov_32.597561_g71266_i0reverse_frame_3 - 0.12 12.3 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA MPS-4 PF17523.2 NODE_79204_length_199_cov_33.743902_g71263_i0reverse_frame_3 - 0.025 14.7 2.6 0.025 14.7 2.6 1.6 1 1 1 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF1700 PF08006.11 NODE_79204_length_199_cov_33.743902_g71263_i0reverse_frame_2 - 0.76 9.3 5.8 0.8 9.2 5.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Nucleoside_tran PF01733.18 NODE_79202_length_199_cov_33.963415_g71261_i0forward_frame_3 - 0.00019 20.9 0.3 0.00021 20.8 0.3 1.1 1 0 0 1 1 1 1 Nucleoside transporter DUF3084 PF11283.8 NODE_79199_length_199_cov_35.487805_g71258_i0forward_frame_2 - 0.082 12.9 0.1 0.11 12.5 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3084) DUF555 PF04475.12 NODE_79195_length_199_cov_36.573171_g71254_i0forward_frame_2 - 0.042 14.2 0.0 0.048 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF555) Glycophorin_A PF01102.18 NODE_79192_length_199_cov_40.823171_g71251_i0forward_frame_2 - 0.11 12.7 0.5 0.15 12.3 0.5 1.2 1 1 0 1 1 1 0 Glycophorin A IMPa_N_2 PF18650.1 NODE_79191_length_199_cov_41.567073_g71250_i0reverse_frame_2 - 0.17 11.2 0.1 0.17 11.2 0.1 1.0 1 0 0 1 1 1 0 Immunomodulating metalloprotease N-terminal domain DUF3760 PF12586.8 NODE_79190_length_199_cov_42.841463_g71249_i0forward_frame_3 - 0.0084 16.3 1.0 0.015 15.4 1.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3760) DUF3791 PF12668.7 NODE_79186_length_199_cov_45.128049_g71245_i0reverse_frame_3 - 0.15 12.1 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3791) Hid1 PF12722.7 NODE_79186_length_199_cov_45.128049_g71245_i0forward_frame_3 - 1.1e-05 23.8 0.1 1.2e-05 23.7 0.1 1.0 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein Dymeclin PF09742.9 NODE_79186_length_199_cov_45.128049_g71245_i0forward_frame_3 - 0.0098 14.4 0.0 0.01 14.3 0.0 1.0 1 0 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein Herpes_UL14 PF03580.14 NODE_79185_length_199_cov_45.536585_g71244_i0forward_frame_2 - 0.024 14.9 0.5 0.026 14.8 0.5 1.1 1 0 0 1 1 1 0 Herpesvirus UL14-like protein DUF3683 PF12447.8 NODE_79185_length_199_cov_45.536585_g71244_i0forward_frame_2 - 0.029 14.5 0.3 0.03 14.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3683) Smr PF01713.21 NODE_79184_length_199_cov_47.713415_g71243_i0reverse_frame_3 - 7.3e-05 23.1 0.0 8.3e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Smr domain Reticulon PF02453.17 NODE_79180_length_199_cov_50.908537_g71239_i0forward_frame_2 - 0.0033 17.4 0.8 0.0037 17.2 0.8 1.0 1 0 0 1 1 1 1 Reticulon X PF00739.19 NODE_79179_length_199_cov_52.560976_g71238_i0reverse_frame_2 - 0.22 11.7 2.4 0.23 11.6 2.4 1.0 1 0 0 1 1 1 0 Trans-activation protein X PfUIS3 PF11567.8 NODE_79176_length_199_cov_54.865854_g71235_i0reverse_frame_2 - 0.013 15.8 0.1 0.016 15.5 0.1 1.2 1 0 0 1 1 1 0 Plasmodium falciparum UIS3 membrane protein DUF5429 PF17494.2 NODE_79175_length_199_cov_55.445122_g71234_i0reverse_frame_3 - 0.011 15.8 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5429) DUF5325 PF17259.2 NODE_79170_length_199_cov_69.689024_g71229_i0forward_frame_3 - 0.16 11.8 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5325) Fer4_NifH PF00142.18 NODE_79168_length_199_cov_74.585366_g71227_i0forward_frame_3 - 0.064 12.7 0.0 0.076 12.5 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DUF2963 PF11178.8 NODE_79166_length_199_cov_79.335366_g71225_i0forward_frame_2 - 0.0059 16.3 1.6 0.0094 15.6 1.3 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF2963) Peptidase_M24_C PF16188.5 NODE_79164_length_199_cov_81.085366_g71223_i0forward_frame_3 - 0.02 15.0 0.3 0.027 14.5 0.3 1.3 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 SR-25 PF10500.9 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_3 - 0.035 13.7 10.8 0.035 13.7 10.8 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3128 PF11326.8 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_3 - 0.33 11.3 8.0 1.5 9.2 8.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3128) AP3D1 PF06375.11 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_2 - 0.88 9.8 8.1 1.1 9.5 8.1 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 SR-25 PF10500.9 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_2 - 2.4 7.7 14.5 2.7 7.5 14.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF1768 PF08719.11 NODE_79161_length_199_cov_94.939024_g71220_i0forward_frame_3 - 0.025 14.8 0.0 0.032 14.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1768) MRP-L46 PF11788.8 NODE_79154_length_199_cov_156.786585_g71213_i0reverse_frame_3 - 0.058 14.1 5.4 0.069 13.9 5.4 1.1 1 0 0 1 1 1 0 39S mitochondrial ribosomal protein L46 YolD PF08863.10 NODE_79154_length_199_cov_156.786585_g71213_i0reverse_frame_3 - 0.063 13.3 0.2 0.063 13.3 0.2 1.9 1 1 1 2 2 2 0 YolD-like protein Tricorn_C1 PF14684.6 NODE_79154_length_199_cov_156.786585_g71213_i0reverse_frame_3 - 0.08 13.0 0.2 0.1 12.7 0.2 1.1 1 0 0 1 1 1 0 Tricorn protease C1 domain Alpha_adaptin_C PF02296.16 NODE_79147_length_199_cov_4490.750000_g71206_i0reverse_frame_3 - 0.032 14.4 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain DUF3732 PF12532.8 NODE_79137_length_200_cov_0.896970_g71196_i0reverse_frame_2 - 0.02 14.5 0.2 0.02 14.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3732) DUF2014 PF09427.10 NODE_79137_length_200_cov_0.896970_g71196_i0forward_frame_2 - 0.12 11.7 0.7 0.11 11.8 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2014) Helicase_C PF00271.31 NODE_79136_length_200_cov_0.951515_g71195_i0reverse_frame_2 - 0.0011 19.3 0.0 0.0011 19.3 0.0 1.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Kunitz_BPTI PF00014.23 NODE_79135_length_200_cov_0.951515_g71194_i0reverse_frame_3 - 0.071 13.4 0.2 0.086 13.1 0.2 1.2 1 0 0 1 1 1 0 Kunitz/Bovine pancreatic trypsin inhibitor domain TMEM190 PF15431.6 NODE_79134_length_200_cov_0.951515_g71193_i0forward_frame_3 - 0.0082 16.3 2.5 0.009 16.2 2.5 1.1 1 0 0 1 1 1 1 Transmembrane protein 190 MepB PF08877.10 NODE_79133_length_200_cov_0.957576_g71192_i0reverse_frame_2 - 0.19 11.4 0.0 0.24 11.1 0.0 1.1 1 0 0 1 1 1 0 MepB protein DUF2975 PF11188.8 NODE_79132_length_200_cov_0.957576_g71191_i0reverse_frame_2 - 0.021 14.7 0.1 0.022 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) HTH_13 PF11972.8 NODE_79123_length_200_cov_0.963636_g71182_i0forward_frame_2 - 0.16 12.1 1.8 0.23 11.5 1.8 1.3 1 0 0 1 1 1 0 HTH DNA binding domain DUF3685 PF12452.8 NODE_79118_length_200_cov_0.963636_g71177_i0forward_frame_3 - 0.1 12.3 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) TRAM1 PF08390.11 NODE_79117_length_200_cov_0.963636_g71176_i0forward_frame_3 - 0.0084 15.7 0.0 0.009 15.6 0.0 1.1 1 0 0 1 1 1 1 TRAM1-like protein HemY_N PF07219.13 NODE_79116_length_200_cov_0.963636_g71175_i0reverse_frame_3 - 0.064 13.4 0.0 0.075 13.2 0.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus DEC-1_N PF04625.13 NODE_79116_length_200_cov_0.963636_g71175_i0reverse_frame_2 - 0.91 8.5 16.4 1 8.3 16.4 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DUF5525 PF17663.1 NODE_79116_length_200_cov_0.963636_g71175_i0reverse_frame_2 - 2.8 5.9 14.0 3.1 5.7 14.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) TonB_N PF16031.5 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_2 - 0.13 12.8 2.1 0.14 12.7 2.1 1.2 1 1 0 1 1 1 0 TonB polyproline region Pap_E4 PF02711.14 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_2 - 3.8 8.5 7.5 4.4 8.3 7.5 1.1 1 0 0 1 1 1 0 E4 protein DUF5496 PF17600.2 NODE_79112_length_200_cov_0.969697_g71171_i0reverse_frame_3 - 0.0018 18.3 0.1 0.0019 18.2 0.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5496) Endothelin PF00322.17 NODE_79112_length_200_cov_0.969697_g71171_i0reverse_frame_2 - 0.072 12.7 0.6 0.1 12.2 0.6 1.3 1 0 0 1 1 1 0 Endothelin family Nfu_N PF08712.11 NODE_79112_length_200_cov_0.969697_g71171_i0forward_frame_3 - 0.16 12.1 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Scaffold protein Nfu/NifU N terminal Nepo_coat_N PF03689.15 NODE_79110_length_200_cov_0.969697_g71169_i0forward_frame_2 - 0.16 11.9 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain Abi_HHR PF07815.14 NODE_79109_length_200_cov_0.969697_g71168_i0reverse_frame_2 - 0.098 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Abl-interactor HHR DUF4215 PF13948.6 NODE_79107_length_200_cov_0.969697_g71166_i0forward_frame_2 - 2e-05 24.9 2.2 4e-05 24.0 0.1 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4215) Edc3_linker PF16598.5 NODE_79105_length_200_cov_0.969697_g71164_i0forward_frame_3 - 0.079 13.6 2.2 0.19 12.4 2.2 1.6 1 1 0 1 1 1 0 Linker region of enhancer of mRNA-decapping protein 3 zf-NADH-PPase PF09297.11 NODE_79100_length_200_cov_0.969697_g71159_i0reverse_frame_2 - 0.068 12.8 0.1 0.11 12.1 0.1 1.4 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain RHH_7 PF16777.5 NODE_79097_length_200_cov_0.969697_g71156_i0forward_frame_2 - 0.011 16.1 0.6 0.07 13.5 0.6 1.9 1 1 0 1 1 1 0 Transcriptional regulator, RHH-like, CopG DUF1534 PF07551.11 NODE_79095_length_200_cov_0.969697_g71154_i0reverse_frame_3 - 0.24 11.2 0.4 0.24 11.2 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1534) TPR_10 PF13374.6 NODE_79095_length_200_cov_0.969697_g71154_i0forward_frame_3 - 0.0064 16.3 0.0 0.017 15.0 0.0 1.7 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_79095_length_200_cov_0.969697_g71154_i0forward_frame_3 - 0.081 13.2 0.0 0.28 11.5 0.0 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat REV PF00424.18 NODE_79090_length_200_cov_0.969697_g71149_i0reverse_frame_2 - 0.051 13.6 0.1 0.052 13.6 0.1 1.1 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) ANP PF00212.18 NODE_79089_length_200_cov_0.969697_g71148_i0reverse_frame_3 - 0.0082 16.3 0.2 0.013 15.7 0.2 1.3 1 0 0 1 1 1 1 Atrial natriuretic peptide E2 PF08199.11 NODE_79088_length_200_cov_0.969697_g71147_i0reverse_frame_3 - 0.11 12.5 4.3 0.18 11.8 4.3 1.4 1 0 0 1 1 1 0 Bacteriophage E2-like protein zf-HC5HC2H_2 PF13832.6 NODE_79088_length_200_cov_0.969697_g71147_i0reverse_frame_3 - 0.12 12.6 2.3 0.13 12.4 2.3 1.1 1 0 0 1 1 1 0 PHD-zinc-finger like domain Polyketide_cyc2 PF10604.9 NODE_79080_length_200_cov_0.969697_g71139_i0forward_frame_2 - 0.028 14.7 0.1 0.035 14.4 0.1 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport PI3K_p85B PF02192.16 NODE_79077_length_200_cov_1.036364_g71136_i0reverse_frame_3 - 0.072 12.8 0.1 0.096 12.4 0.1 1.2 1 0 0 1 1 1 0 PI3-kinase family, p85-binding domain DDHD PF02862.17 NODE_79075_length_200_cov_1.054545_g71134_i0reverse_frame_3 - 0.18 11.9 0.6 0.18 11.9 0.6 1.1 1 0 0 1 1 1 0 DDHD domain Leader_Erm PF08253.11 NODE_79073_length_200_cov_1.060606_g71132_i0reverse_frame_3 - 0.16 12.2 0.4 0.97 9.9 0.4 2.1 1 1 0 1 1 1 0 Erm Leader peptide IMUP PF15761.5 NODE_79071_length_200_cov_1.084848_g71130_i0forward_frame_2 - 1.1 10.0 9.5 1.3 9.8 9.5 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein AF-4 PF05110.13 NODE_79071_length_200_cov_1.084848_g71130_i0forward_frame_2 - 1.7 6.7 9.5 1.5 6.8 9.5 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein Ribosomal_L37ae PF01780.19 NODE_79066_length_200_cov_1.109091_g71125_i0forward_frame_2 - 0.082 13.0 0.4 0.096 12.8 0.4 1.1 1 0 0 1 1 1 0 Ribosomal L37ae protein family Ytp1 PF10355.9 NODE_79054_length_200_cov_1.187879_g71113_i0reverse_frame_3 - 0.038 13.2 0.0 0.049 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (Ytp1) DUF5480 PF17576.2 NODE_79051_length_200_cov_1.193939_g71110_i0reverse_frame_2 - 1.6 8.8 5.2 0.58 10.2 1.2 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5480) TFIIIC_sub6 PF10419.9 NODE_79050_length_200_cov_1.200000_g71109_i0forward_frame_2 - 0.04 13.8 0.0 0.044 13.7 0.0 1.1 1 0 0 1 1 1 0 TFIIIC subunit triple barrel domain MIT_LIKE_ACTX PF17556.2 NODE_79042_length_200_cov_1.212121_g71101_i0forward_frame_2 - 0.092 13.4 1.8 0.11 13.1 1.8 1.1 1 0 0 1 1 1 0 MIT-like atracotoxin family Phage_Coat_A PF05357.13 NODE_79040_length_200_cov_1.212121_g71099_i0reverse_frame_3 - 0.062 13.1 0.1 0.082 12.7 0.1 1.2 1 0 0 1 1 1 0 Phage Coat Protein A PhoLip_ATPase_N PF16209.5 NODE_79027_length_200_cov_1.272727_g71086_i0reverse_frame_2 - 0.17 11.6 2.3 0.23 11.1 2.3 1.4 1 1 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal DUF4396 PF14342.6 NODE_79025_length_200_cov_1.284848_g71084_i0forward_frame_2 - 0.08 13.3 1.0 0.098 13.0 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4396) DUF1801 PF08818.11 NODE_79024_length_200_cov_1.284848_g71083_i0reverse_frame_2 - 0.21 12.1 0.0 0.21 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DU1801) Colipase-like PF15083.6 NODE_79023_length_200_cov_1.290909_g71082_i0reverse_frame_3 - 0.011 15.8 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 0 Colipase-like SK_channel PF03530.14 NODE_79022_length_200_cov_1.290909_g71081_i0reverse_frame_2 - 0.082 12.9 0.2 0.097 12.7 0.2 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel NT5C PF06941.12 NODE_79017_length_200_cov_1.315152_g71076_i0forward_frame_2 - 0.021 14.7 0.0 0.025 14.5 0.0 1.0 1 0 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Hormone_5 PF00184.17 NODE_79015_length_200_cov_1.321212_g71074_i0reverse_frame_2 - 0.43 11.4 6.3 0.47 11.3 6.3 1.0 1 0 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain DUF5375 PF17345.2 NODE_79015_length_200_cov_1.321212_g71074_i0forward_frame_2 - 0.068 13.1 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5375) Organ_specific PF10950.8 NODE_79014_length_200_cov_1.339394_g71073_i0forward_frame_2 - 0.016 15.9 0.7 0.022 15.4 0.7 1.2 1 0 0 1 1 1 0 Organ specific protein Imm21 PF15589.6 NODE_79013_length_200_cov_1.345455_g71072_i0forward_frame_2 - 0.027 14.5 0.0 0.33 11.0 0.0 1.9 1 1 1 2 2 2 0 Immunity protein 21 Cys_Met_Meta_PP PF01053.20 NODE_79011_length_200_cov_1.351515_g71070_i0reverse_frame_2 - 0.051 12.1 0.0 0.056 12.0 0.0 1.0 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Pro_CA PF00484.19 NODE_79006_length_200_cov_1.381818_g71065_i0reverse_frame_2 - 1.4e-12 48.2 0.1 1.5e-12 48.0 0.1 1.0 1 0 0 1 1 1 1 Carbonic anhydrase AtuA PF07287.11 NODE_79006_length_200_cov_1.381818_g71065_i0reverse_frame_2 - 0.029 13.1 0.1 0.034 12.8 0.1 1.0 1 0 0 1 1 1 0 Acyclic terpene utilisation family protein AtuA PTS_EIIA_2 PF00359.22 NODE_79005_length_200_cov_1.381818_g71064_i0reverse_frame_3 - 1.8e-09 37.6 0.0 2e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Imm17 PF15562.6 NODE_79000_length_200_cov_1.400000_g71059_i0forward_frame_2 - 0.045 13.6 0.1 0.055 13.3 0.1 1.1 1 0 0 1 1 1 0 Immunity protein 17 BCDHK_Adom3 PF10436.9 NODE_78993_length_200_cov_1.442424_g71052_i0forward_frame_3 - 0.06 13.2 0.0 0.073 12.9 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase P_C PF06640.11 NODE_78990_length_200_cov_1.442424_g71049_i0forward_frame_2 - 0.08 13.1 2.5 0.082 13.0 2.5 1.0 1 0 0 1 1 1 0 P protein C-terminus LktC PF06261.11 NODE_78987_length_200_cov_1.448485_g71046_i0reverse_frame_3 - 0.017 15.1 1.1 0.018 14.9 1.1 1.0 1 0 0 1 1 1 0 Actinobacillus actinomycetemcomitans leukotoxin activator LktC Tax PF02959.16 NODE_78980_length_200_cov_1.454545_g71039_i0reverse_frame_2 - 0.061 12.8 0.1 0.061 12.8 0.1 1.1 1 0 0 1 1 1 0 HTLV Tax DUF2065 PF09838.9 NODE_78975_length_200_cov_1.454545_g71034_i0reverse_frame_2 - 0.21 11.7 0.2 0.3 11.1 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2065) Peptidase_C36 PF05415.11 NODE_78970_length_200_cov_1.454545_g71029_i0reverse_frame_3 - 0.097 12.9 0.1 0.1 12.8 0.1 1.1 1 0 0 1 1 1 0 Beet necrotic yellow vein furovirus-type papain-like endopeptidase 7TM_GPCR_Srab PF10292.9 NODE_78967_length_200_cov_1.454545_g71026_i0forward_frame_3 - 0.011 14.7 0.5 0.012 14.6 0.5 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor Antimicrobial_4 PF08024.11 NODE_78965_length_200_cov_1.490909_g71024_i0forward_frame_2 - 0.1 12.7 1.2 0.17 11.9 1.2 1.3 1 0 0 1 1 1 0 Ant antimicrobial peptide Rota_VP2 PF05087.12 NODE_78960_length_200_cov_1.521212_g71019_i0reverse_frame_2 - 1.3 7.1 3.8 1.4 6.9 3.8 1.0 1 0 0 1 1 1 0 Rotavirus VP2 protein KLRAQ PF10205.9 NODE_78960_length_200_cov_1.521212_g71019_i0forward_frame_3 - 0.031 14.5 2.5 0.034 14.4 2.5 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein DivIVA PF05103.13 NODE_78960_length_200_cov_1.521212_g71019_i0forward_frame_3 - 0.036 14.1 2.5 0.049 13.7 2.5 1.2 1 0 0 1 1 1 0 DivIVA protein Ran-binding PF05508.11 NODE_78960_length_200_cov_1.521212_g71019_i0forward_frame_3 - 0.077 12.0 2.2 0.079 11.9 2.2 1.0 1 0 0 1 1 1 0 RanGTP-binding protein DUF383 PF04063.14 NODE_78956_length_200_cov_1.551515_g71015_i0reverse_frame_3 - 0.078 12.6 0.8 0.11 12.1 0.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF383) DUF2971 PF11185.8 NODE_78956_length_200_cov_1.551515_g71015_i0reverse_frame_3 - 0.094 13.9 2.0 0.11 13.7 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2971) Carb_bind PF10645.9 NODE_78953_length_200_cov_1.563636_g71012_i0forward_frame_2 - 0.013 15.7 1.0 0.018 15.2 1.0 1.2 1 0 0 1 1 1 0 Carbohydrate binding EndIII_4Fe-2S PF10576.9 NODE_78953_length_200_cov_1.563636_g71012_i0forward_frame_2 - 0.13 12.6 0.7 0.13 12.6 0.7 1.7 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III PSCyt2 PF07583.11 NODE_78951_length_200_cov_1.569697_g71010_i0reverse_frame_3 - 0.11 12.4 0.2 0.12 12.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1549) ICAP-1_inte_bdg PF10480.9 NODE_78948_length_200_cov_1.587879_g71007_i0reverse_frame_3 - 0.06 13.3 0.0 0.063 13.3 0.0 1.1 1 0 0 1 1 1 0 Beta-1 integrin binding protein Tudor_3 PF18115.1 NODE_78945_length_200_cov_1.600000_g71004_i0forward_frame_2 - 0.063 13.1 0.1 0.12 12.3 0.1 1.5 1 1 0 1 1 1 0 DNA repair protein Crb2 Tudor domain DUF2203 PF09969.9 NODE_78945_length_200_cov_1.600000_g71004_i0forward_frame_2 - 0.082 13.6 1.6 0.11 13.2 1.6 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) zf-C2H2_9 PF16293.5 NODE_78942_length_200_cov_1.618182_g71001_i0reverse_frame_2 - 0.11 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) DUF222 PF02720.17 NODE_78942_length_200_cov_1.618182_g71001_i0forward_frame_3 - 0.0094 15.5 0.2 0.0094 15.5 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF222) DUF1392 PF07154.11 NODE_78938_length_200_cov_1.630303_g70997_i0reverse_frame_3 - 0.01 16.0 0.0 0.012 15.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1392) YaaC PF14175.6 NODE_78937_length_200_cov_1.636364_g70996_i0forward_frame_3 - 0.091 12.0 0.1 0.091 12.0 0.1 1.0 1 0 0 1 1 1 0 YaaC-like Protein Shugoshin_N PF07558.11 NODE_78934_length_200_cov_1.648485_g70993_i0forward_frame_3 - 0.015 15.2 0.9 0.021 14.7 0.9 1.3 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region CBM49 PF09478.10 NODE_78933_length_200_cov_1.660606_g70992_i0reverse_frame_2 - 0.038 14.3 0.1 0.058 13.7 0.0 1.3 1 1 0 1 1 1 0 Carbohydrate binding domain CBM49 CPV_Polyhedrin PF17515.2 NODE_78933_length_200_cov_1.660606_g70992_i0forward_frame_2 - 0.11 11.8 0.3 0.12 11.7 0.3 1.0 1 0 0 1 1 1 0 Cypovirus polyhedrin Yop-YscD_cpl PF16697.5 NODE_78927_length_200_cov_1.690909_g70986_i0reverse_frame_3 - 0.048 14.0 0.0 0.054 13.8 0.0 1.2 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain Snapin_Pallidin PF14712.6 NODE_78926_length_200_cov_1.690909_g70985_i0reverse_frame_3 - 0.034 14.6 1.8 0.049 14.1 1.7 1.4 1 1 0 1 1 1 0 Snapin/Pallidin Spo12 PF05032.12 NODE_78926_length_200_cov_1.690909_g70985_i0reverse_frame_3 - 0.98 9.4 4.0 2.7 8.0 0.2 2.5 2 1 0 2 2 2 0 Spo12 family PSK_trans_fac PF07704.11 NODE_78925_length_200_cov_1.690909_g70984_i0forward_frame_2 - 0.03 15.1 1.7 0.035 14.9 1.7 1.2 1 0 0 1 1 1 0 Rv0623-like transcription factor Spem1 PF15670.5 NODE_78925_length_200_cov_1.690909_g70984_i0forward_frame_2 - 0.14 11.7 0.1 0.14 11.7 0.1 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF2018 PF09442.10 NODE_78921_length_200_cov_1.696970_g70980_i0reverse_frame_2 - 0.094 13.7 1.1 0.1 13.6 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2018) Pet127 PF08634.10 NODE_78919_length_200_cov_1.696970_g70978_i0forward_frame_3 - 0.17 11.3 0.7 0.16 11.4 0.7 1.1 1 0 0 1 1 1 0 Mitochondrial protein Pet127 SPOB_ab PF14682.6 NODE_78916_length_200_cov_1.709091_g70975_i0reverse_frame_2 - 0.13 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Sporulation initiation phospho-transferase B, C-terminal DUF1272 PF06906.11 NODE_78907_length_200_cov_1.806061_g70966_i0reverse_frame_2 - 3 8.0 4.6 18 5.5 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) Complex1_49kDa PF00346.19 NODE_78906_length_200_cov_1.830303_g70965_i0forward_frame_3 - 5.4e-18 65.0 0.0 5.8e-18 65.0 0.0 1.0 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DUF5316 PF17247.2 NODE_78903_length_200_cov_1.848485_g70962_i0forward_frame_2 - 0.05 13.6 0.0 0.058 13.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5316) DUF561 PF04481.12 NODE_78902_length_200_cov_1.872727_g70961_i0forward_frame_2 - 0.046 12.9 0.1 0.053 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF561) TMEM154 PF15102.6 NODE_78901_length_200_cov_1.872727_g70960_i0reverse_frame_3 - 0.088 12.7 0.8 0.12 12.3 0.8 1.2 1 0 0 1 1 1 0 TMEM154 protein family TRP PF06011.12 NODE_78895_length_200_cov_1.909091_g70954_i0forward_frame_2 - 0.036 12.8 0.4 0.036 12.8 0.4 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Tmemb_cc2 PF10267.9 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.0094 15.1 7.5 0.01 15.0 7.5 1.0 1 0 0 1 1 1 1 Predicted transmembrane and coiled-coil 2 protein Phage_Mu_Gam PF07352.12 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.0096 15.8 9.7 0.01 15.7 9.7 1.0 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein S6OS1 PF15676.5 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.01 14.4 5.2 0.011 14.3 5.2 1.0 1 0 0 1 1 1 0 Six6 opposite strand transcript 1 family TPR_MLP1_2 PF07926.12 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.011 15.8 8.8 0.012 15.7 8.8 1.0 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF3584 PF12128.8 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.018 12.6 6.0 0.017 12.7 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) PMEI PF04043.15 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.079 13.3 0.3 0.085 13.2 0.3 1.0 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor DUF4140 PF13600.6 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.3 11.5 3.7 0.46 11.0 3.7 1.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF4337 PF14235.6 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.31 11.1 6.4 0.35 11.0 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DivIC PF04977.15 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 1.3 8.9 10.6 0.18 11.6 3.1 2.0 1 1 1 2 2 2 0 Septum formation initiator FemAB PF02388.16 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 1.3 7.8 8.1 1.5 7.6 8.1 1.0 1 0 0 1 1 1 0 FemAB family Ran_BP1 PF00638.18 NODE_78889_length_200_cov_1.927273_g70948_i0forward_frame_3 - 0.084 13.1 0.5 0.097 12.9 0.5 1.0 1 0 0 1 1 1 0 RanBP1 domain ATP-synt_ab PF00006.25 NODE_78888_length_200_cov_1.927273_g70947_i0reverse_frame_2 - 2e-07 30.9 0.0 2e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain SapB_2 PF03489.17 NODE_78888_length_200_cov_1.927273_g70947_i0forward_frame_3 - 0.086 13.0 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Saposin-like type B, region 2 TarS_C1 PF18674.1 NODE_78885_length_200_cov_1.933333_g70944_i0reverse_frame_3 - 0.017 15.0 0.4 0.019 14.9 0.4 1.1 1 0 0 1 1 1 0 TarS beta-glycosyltransferase C-terminal domain 1 Pkinase PF00069.25 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 2e-15 56.9 0.1 2.2e-15 56.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 8e-08 31.9 0.0 8e-08 31.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 0.0048 16.9 0.2 0.0056 16.6 0.2 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 0.058 12.2 0.0 0.065 12.0 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase C1_1 PF00130.22 NODE_78869_length_200_cov_2.012121_g70928_i0reverse_frame_2 - 0.064 13.2 6.5 0.073 13.0 6.5 1.1 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Zein-binding PF04576.15 NODE_78869_length_200_cov_2.012121_g70928_i0forward_frame_2 - 0.016 15.5 0.1 0.018 15.3 0.1 1.1 1 0 0 1 1 1 0 Zein-binding # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks376.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks376.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks376.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks376.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GCHY-1 PF02649.14 NODE_78857_length_200_cov_2.139394_g70916_i0reverse_frame_3 - 0.075 12.5 0.0 0.075 12.5 0.0 1.0 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 MFS_1 PF07690.16 NODE_78856_length_200_cov_2.163636_g70915_i0forward_frame_2 - 0.0015 17.6 3.4 0.0016 17.5 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Glyco_hydro_31 PF01055.26 NODE_78854_length_200_cov_2.181818_g70913_i0reverse_frame_2 - 4.6e-17 62.4 0.2 4.8e-17 62.3 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 p47_phox_C PF08944.11 NODE_78848_length_200_cov_2.327273_g70907_i0forward_frame_3 - 0.005 16.2 0.2 0.0075 15.7 0.2 1.3 1 0 0 1 1 1 1 NADPH oxidase subunit p47Phox, C terminal domain DUF1335 PF07056.11 NODE_78847_length_200_cov_2.333333_g70906_i0forward_frame_3 - 0.063 13.4 0.1 0.069 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1335) KilA-N PF04383.13 NODE_78843_length_200_cov_2.393939_g70902_i0reverse_frame_2 - 1.7 8.5 9.0 4 7.3 0.2 2.2 1 1 1 2 2 2 0 KilA-N domain DUF4512 PF14975.6 NODE_78843_length_200_cov_2.393939_g70902_i0reverse_frame_2 - 4.8 8.0 6.3 1.1e+02 3.6 6.0 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4512) JmjN PF02375.17 NODE_78839_length_200_cov_2.406061_g70898_i0forward_frame_2 - 0.00013 21.9 0.0 0.00018 21.4 0.0 1.2 1 0 0 1 1 1 1 jmjN domain CNOT1_TTP_bind PF16417.5 NODE_78839_length_200_cov_2.406061_g70898_i0forward_frame_2 - 0.0046 16.2 0.0 0.0054 15.9 0.0 1.0 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain Androgen_recep PF02166.16 NODE_78837_length_200_cov_2.478788_g70896_i0reverse_frame_2 - 0.37 9.6 4.5 0.4 9.5 4.5 1.0 1 0 0 1 1 1 0 Androgen receptor DUF4709 PF15821.5 NODE_78835_length_200_cov_2.636364_g70894_i0reverse_frame_2 - 0.011 16.0 0.5 0.013 15.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4709) Na_Ca_ex PF01699.24 NODE_78834_length_200_cov_2.642424_g70893_i0reverse_frame_2 - 5.5e-12 45.9 2.6 6e-12 45.8 2.6 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein APC_u15 PF16636.5 NODE_78831_length_200_cov_2.672727_g70890_i0reverse_frame_3 - 0.065 13.7 0.9 0.07 13.6 0.9 1.1 1 0 0 1 1 1 0 Unstructured region on APC between APC_crr regions 5 and 6 YqzL PF14006.6 NODE_78828_length_200_cov_2.993939_g70887_i0forward_frame_3 - 0.14 12.6 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 YqzL-like protein EF_TS PF00889.19 NODE_78823_length_200_cov_3.321212_g70882_i0forward_frame_3 - 1.2e-16 61.0 0.6 1.2e-16 61.0 0.6 1.0 1 0 0 1 1 1 1 Elongation factor TS Borrelia_rep PF03183.13 NODE_78822_length_200_cov_3.345455_g70881_i0reverse_frame_2 - 2.5 8.3 6.3 0.86 9.7 0.4 2.7 3 0 0 3 3 3 0 Borrelia repeat protein MtlR PF05068.12 NODE_78820_length_200_cov_3.618182_g70879_i0forward_frame_3 - 3.5e-22 79.2 0.0 3.6e-22 79.1 0.0 1.0 1 0 0 1 1 1 1 Mannitol repressor DUF5603 PF18231.1 NODE_78815_length_200_cov_17.624242_g70874_i0forward_frame_3 - 0.039 14.3 0.0 0.042 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5603) Dpoe2NT PF12213.8 NODE_78815_length_200_cov_17.624242_g70874_i0forward_frame_2 - 0.068 13.5 0.7 0.086 13.1 0.7 1.2 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal DUF2538 PF10804.8 NODE_78806_length_200_cov_29.909091_g70865_i0reverse_frame_3 - 0.022 14.5 0.1 0.026 14.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2538) Peptidase_U32 PF01136.19 NODE_78805_length_200_cov_31.084848_g70864_i0forward_frame_2 - 0.18 11.0 0.0 0.19 10.8 0.0 1.0 1 0 0 1 1 1 0 Peptidase family U32 NPCC PF08058.11 NODE_78804_length_200_cov_31.315152_g70863_i0forward_frame_3 - 0.78 9.8 2.7 0.84 9.7 2.7 1.0 1 0 0 1 1 1 0 Nuclear pore complex component DUF3043 PF11241.8 NODE_78802_length_200_cov_32.903030_g70861_i0forward_frame_3 - 0.031 14.3 0.0 0.033 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Ectatomin PF06457.11 NODE_78801_length_200_cov_32.993939_g70860_i0forward_frame_2 - 0.014 15.3 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Ectatomin DUF2781 PF10914.8 NODE_78792_length_200_cov_43.593939_g70851_i0forward_frame_3 - 0.14 12.5 1.4 0.18 12.2 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) Wzy_C PF04932.15 NODE_78791_length_200_cov_44.921212_g70850_i0forward_frame_3 - 5.2 6.7 8.4 5.7 6.6 8.4 1.1 1 0 0 1 1 1 0 O-Antigen ligase Baculo_p24 PF05073.12 NODE_78791_length_200_cov_44.921212_g70850_i0forward_frame_2 - 0.24 11.2 1.1 0.27 11.0 1.1 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein ETRAMP PF09716.10 NODE_78784_length_200_cov_51.703030_g70843_i0reverse_frame_2 - 0.054 13.6 0.1 0.066 13.3 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF3677 PF12432.8 NODE_78784_length_200_cov_51.703030_g70843_i0reverse_frame_2 - 0.11 12.8 0.1 0.18 12.1 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3677) Cadherin_C_2 PF16492.5 NODE_78781_length_200_cov_55.739394_g70840_i0reverse_frame_2 - 0.012 16.4 0.2 0.013 16.2 0.2 1.1 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal EphA2_TM PF14575.6 NODE_78781_length_200_cov_55.739394_g70840_i0reverse_frame_2 - 0.046 14.6 0.2 0.047 14.6 0.2 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF3357 PF11837.8 NODE_78781_length_200_cov_55.739394_g70840_i0reverse_frame_2 - 0.059 13.8 0.5 0.059 13.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) zf-C2HE PF16278.5 NODE_78775_length_200_cov_62.696970_g70834_i0forward_frame_3 - 0.046 14.2 0.2 0.061 13.8 0.2 1.2 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger YrhC PF14143.6 NODE_78773_length_200_cov_66.327273_g70832_i0reverse_frame_2 - 0.11 12.6 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 YrhC-like protein TMF_DNA_bd PF12329.8 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.0017 18.3 8.1 0.0021 18.0 8.1 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding ABC_tran_CTD PF16326.5 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.003 17.8 2.2 0.0037 17.5 2.2 1.1 1 0 0 1 1 1 1 ABC transporter C-terminal domain SlyX PF04102.12 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.007 17.0 0.9 0.0089 16.6 0.9 1.1 1 0 0 1 1 1 1 SlyX DUF2730 PF10805.8 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.0088 16.1 1.8 0.011 15.8 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2730) Nsp1_C PF05064.13 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.024 14.5 2.4 0.026 14.3 2.4 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region PKcGMP_CC PF16808.5 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.03 14.2 2.3 0.068 13.0 0.3 2.5 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DivIC PF04977.15 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.04 13.7 2.0 0.065 13.0 0.6 1.8 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.061 12.6 0.7 0.066 12.4 0.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein TcdB_N PF12918.7 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.09 13.1 1.8 0.09 13.1 1.8 1.9 1 1 1 2 2 2 0 TcdB toxin N-terminal helical domain zf-met PF12874.7 NODE_78772_length_200_cov_66.939394_g70831_i0forward_frame_3 - 0.15 12.5 0.9 0.32 11.5 0.9 1.5 1 0 0 1 1 1 0 Zinc-finger of C2H2 type DUF3177 PF11375.8 NODE_78771_length_200_cov_68.945455_g70830_i0reverse_frame_3 - 0.061 13.1 0.1 0.063 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3177) CIMR PF00878.18 NODE_78770_length_200_cov_73.278788_g70829_i0forward_frame_3 - 0.079 13.0 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 Cation-independent mannose-6-phosphate receptor repeat DUF3953 PF13129.6 NODE_78766_length_200_cov_78.648485_g70825_i0forward_frame_2 - 0.012 15.4 3.3 0.021 14.6 3.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3953) cNMP_binding PF00027.29 NODE_78763_length_200_cov_85.139394_g70822_i0forward_frame_2 - 5.6e-05 23.1 0.0 7.3e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF1489 PF07370.11 NODE_78757_length_200_cov_107.096970_g70816_i0reverse_frame_2 - 0.068 12.9 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1489) Chi-conotoxin PF16981.5 NODE_78754_length_200_cov_111.042424_g70813_i0forward_frame_3 - 0.098 12.9 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 chi-Conotoxin or t superfamily Transpos_assoc PF13963.6 NODE_78753_length_200_cov_113.260606_g70812_i0forward_frame_2 - 0.057 13.7 0.0 0.07 13.4 0.0 1.1 1 0 0 1 1 1 0 Transposase-associated domain DUF3404 PF11884.8 NODE_78750_length_200_cov_133.224242_g70809_i0reverse_frame_3 - 0.1 11.8 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) Glycolytic PF00274.19 NODE_78748_length_200_cov_145.460606_g70807_i0reverse_frame_3 - 0.072 11.8 0.2 0.072 11.8 0.2 1.1 1 0 0 1 1 1 0 Fructose-bisphosphate aldolase class-I TMEM100 PF16311.5 NODE_78744_length_200_cov_218.127273_g70803_i0forward_frame_3 - 0.044 13.4 0.0 0.047 13.3 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 100 Prominin PF05478.11 NODE_78744_length_200_cov_218.127273_g70803_i0forward_frame_2 - 1.7 6.5 7.9 1.9 6.3 7.9 1.0 1 0 0 1 1 1 0 Prominin LacY_symp PF01306.19 NODE_78740_length_200_cov_296.012121_g70799_i0reverse_frame_3 - 0.029 13.2 1.7 0.028 13.2 1.7 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter TAF1D PF15333.6 NODE_78740_length_200_cov_296.012121_g70799_i0forward_frame_2 - 0.016 15.0 0.8 0.016 15.0 0.8 1.1 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D GTP_cyclohydroI PF01227.22 NODE_78739_length_200_cov_541.084848_g70798_i0forward_frame_3 - 0.069 12.6 0.1 0.078 12.4 0.1 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase I FixP_N PF14715.6 NODE_78738_length_200_cov_4111.890909_g70797_i0reverse_frame_3 - 0.51 10.1 4.7 0.66 9.8 4.7 1.1 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP LacY_symp PF01306.19 NODE_78738_length_200_cov_4111.890909_g70797_i0reverse_frame_3 - 0.83 8.4 5.7 0.88 8.3 5.7 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter DUF591 PF04569.14 NODE_78737_length_200_cov_5761.800000_g70796_i0forward_frame_3 - 0.19 11.8 4.0 1 9.4 4.0 2.0 1 1 0 1 1 1 0 Protein of unknown function AP4E_app_platf PF14807.6 NODE_78736_length_201_cov_0.849398_g70795_i0reverse_frame_2 - 0.41 11.0 3.6 0.44 10.9 3.6 1.0 1 0 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform DUF3915 PF13054.6 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_3 - 0.035 14.1 3.7 0.04 13.9 3.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_3 - 0.29 9.4 9.8 0.27 9.5 9.8 1.0 1 0 0 1 1 1 0 Atrophin-1 family Selenoprotein_S PF06936.11 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_3 - 0.41 10.4 4.7 0.44 10.3 4.7 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) Phage_Gp23 PF10669.9 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_3 - 1.3 9.3 4.7 1.4 9.3 4.7 1.2 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) DUF2423 PF10338.9 NODE_78729_length_201_cov_0.933735_g70788_i0forward_frame_2 - 0.045 14.0 5.1 0.045 14.0 5.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2423) Sex_peptide PF08138.11 NODE_78718_length_201_cov_0.957831_g70777_i0forward_frame_3 - 0.09 12.9 1.8 0.11 12.7 1.8 1.3 1 1 0 1 1 1 0 Sex peptide (SP) family CDC48_2 PF02933.17 NODE_78715_length_201_cov_0.963855_g70774_i0forward_frame_3 - 0.041 13.7 0.0 0.041 13.7 0.0 1.1 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 EELM2 PF15863.5 NODE_78714_length_201_cov_0.963855_g70773_i0forward_frame_3 - 0.13 12.4 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Extended EGL-27 and MTA1 homology domain Chromo_shadow PF01393.19 NODE_78711_length_201_cov_0.963855_g70770_i0reverse_frame_2 - 0.027 14.5 0.0 0.05 13.7 0.0 1.5 1 0 0 1 1 1 0 Chromo shadow domain HEPN_LA2681 PF18733.1 NODE_78708_length_201_cov_0.963855_g70767_i0forward_frame_2 - 0.059 12.7 2.0 1.4 8.1 0.0 2.0 1 1 1 2 2 2 0 LA2681-like HEPN SecIII_SopE_N PF05364.14 NODE_78704_length_201_cov_0.963855_g70763_i0forward_frame_2 - 0.027 14.5 0.0 0.033 14.2 0.0 1.1 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus IQ PF00612.27 NODE_78701_length_201_cov_0.963855_g70760_i0forward_frame_3 - 0.9 9.5 4.0 1.4 8.9 4.0 1.3 1 0 0 1 1 1 0 IQ calmodulin-binding motif WAC_Acf1_DNA_bd PF10537.9 NODE_78691_length_201_cov_0.963855_g70750_i0forward_frame_3 - 0.092 13.3 0.5 0.1 13.2 0.5 1.0 1 0 0 1 1 1 0 ATP-utilising chromatin assembly and remodelling N-terminal SSP160 PF06933.11 NODE_78689_length_201_cov_0.963855_g70748_i0forward_frame_2 - 0.52 8.5 8.4 0.51 8.5 8.4 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Nrap_D6 PF17407.2 NODE_78682_length_201_cov_0.963855_g70741_i0reverse_frame_2 - 0.034 14.4 0.0 0.04 14.1 0.0 1.1 1 0 0 1 1 1 0 Nrap protein domain 6 Lem_TRP PF08262.11 NODE_78682_length_201_cov_0.963855_g70741_i0forward_frame_3 - 0.1 12.6 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Leucophaea maderae tachykinin-related peptide TK PF00265.18 NODE_78676_length_201_cov_0.969880_g70735_i0forward_frame_2 - 1.5e-17 64.0 0.0 1.6e-17 64.0 0.0 1.0 1 0 0 1 1 1 1 Thymidine kinase Herpes_ori_bp PF02399.15 NODE_78676_length_201_cov_0.969880_g70735_i0forward_frame_2 - 0.029 12.4 0.0 0.031 12.4 0.0 1.0 1 0 0 1 1 1 0 Origin of replication binding protein AAA_14 PF13173.6 NODE_78676_length_201_cov_0.969880_g70735_i0forward_frame_2 - 0.12 12.4 0.0 0.12 12.4 0.0 1.0 1 0 0 1 1 1 0 AAA domain PRP8_domainIV PF12134.8 NODE_78675_length_201_cov_0.975904_g70734_i0reverse_frame_3 - 0.031 14.0 0.0 0.031 14.0 0.0 1.0 1 0 0 1 1 1 0 PRP8 domain IV core Acetyltransf_1 PF00583.25 NODE_78674_length_201_cov_0.981928_g70733_i0forward_frame_3 - 0.085 13.1 0.0 0.094 13.0 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Metallothio_5 PF02067.15 NODE_78673_length_201_cov_1.006024_g70732_i0forward_frame_3 - 0.34 11.1 10.9 0.2 11.8 3.3 2.1 2 0 0 2 2 2 0 Metallothionein family 5 Tmemb_18A PF09771.9 NODE_78672_length_201_cov_1.012048_g70731_i0reverse_frame_3 - 0.11 12.9 0.0 0.11 12.8 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 188 EAV_GP5 PF15981.5 NODE_78671_length_201_cov_1.018072_g70730_i0reverse_frame_3 - 0.036 14.5 0.6 0.041 14.3 0.6 1.2 1 0 0 1 1 1 0 Envelope glycoprotein GP 5 of equine arteritis virus DUF3326 PF11805.8 NODE_78661_length_201_cov_1.126506_g70720_i0forward_frame_3 - 0.043 12.7 0.0 0.045 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3326) DiS_P_DiS PF06750.13 NODE_78661_length_201_cov_1.126506_g70720_i0forward_frame_3 - 0.14 12.3 0.7 0.19 11.8 0.7 1.2 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain WSK PF03832.13 NODE_78658_length_201_cov_1.132530_g70717_i0reverse_frame_3 - 0.066 12.9 0.5 0.1 12.3 0.5 1.3 1 0 0 1 1 1 0 WSK motif AalphaY_MDB PF04611.12 NODE_78653_length_201_cov_1.150602_g70712_i0reverse_frame_2 - 0.022 14.8 0.1 0.025 14.6 0.1 1.1 1 0 0 1 1 1 0 Mating type protein A alpha Y mating type dependent binding region HTH_ABP1_N PF18107.1 NODE_78647_length_201_cov_1.180723_g70706_i0reverse_frame_2 - 0.25 11.1 2.5 0.35 10.6 2.5 1.2 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain DUF3039 PF11238.8 NODE_78643_length_201_cov_1.198795_g70702_i0reverse_frame_3 - 0.084 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3039) DUF2195 PF09961.9 NODE_78642_length_201_cov_1.204819_g70701_i0forward_frame_3 - 0.019 14.9 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2195) bPH_5 PF10882.8 NODE_78636_length_201_cov_1.222892_g70695_i0forward_frame_2 - 0.052 13.6 0.0 0.063 13.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial PH domain DUF236 PF03057.14 NODE_78634_length_201_cov_1.228916_g70693_i0reverse_frame_2 - 0.26 11.3 1.8 1.8 8.6 0.1 2.1 2 0 0 2 2 2 0 DUF236 repeat Atrophin-1 PF03154.15 NODE_78630_length_201_cov_1.271084_g70689_i0reverse_frame_3 - 2.2 6.5 4.5 2.4 6.4 4.5 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF3439 PF11921.8 NODE_78613_length_201_cov_1.379518_g70672_i0reverse_frame_3 - 0.36 10.8 6.8 0.36 10.8 6.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) DUF3660 PF12398.8 NODE_78607_length_201_cov_1.409639_g70666_i0forward_frame_2 - 0.18 11.9 1.1 0.22 11.6 0.1 1.7 2 1 0 2 2 2 0 Receptor serine/threonine kinase Biotin_lipoyl PF00364.22 NODE_78604_length_201_cov_1.427711_g70663_i0forward_frame_2 - 0.18 11.7 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Biotin-requiring enzyme DUF3563 PF12086.8 NODE_78600_length_201_cov_1.433735_g70659_i0reverse_frame_2 - 0.081 12.7 0.2 0.16 11.7 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3563) Phage_int_SAM_1 PF02899.17 NODE_78599_length_201_cov_1.439759_g70658_i0forward_frame_2 - 0.0041 17.4 0.0 0.0047 17.2 0.0 1.0 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain KleE PF17394.2 NODE_78596_length_201_cov_1.439759_g70655_i0reverse_frame_2 - 0.036 14.3 0.2 0.044 14.0 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein Fcf1 PF04900.12 NODE_78596_length_201_cov_1.439759_g70655_i0forward_frame_3 - 2.3e-06 27.9 0.8 2.5e-06 27.8 0.8 1.1 1 0 0 1 1 1 1 Fcf1 CPSase_C PF18302.1 NODE_78594_length_201_cov_1.439759_g70653_i0reverse_frame_3 - 0.22 12.0 1.4 0.31 11.6 0.2 1.9 2 0 0 2 2 2 0 Carbamoyl phosphate synthetase C-terminal domain PilJ PF13675.6 NODE_78593_length_201_cov_1.439759_g70652_i0reverse_frame_2 - 0.091 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term Phage_GP20 PF06810.11 NODE_78591_length_201_cov_1.445783_g70650_i0reverse_frame_3 - 0.008 16.0 0.1 0.0089 15.8 0.1 1.1 1 0 0 1 1 1 1 Phage minor structural protein GP20 Baculo_11_kDa PF06143.11 NODE_78591_length_201_cov_1.445783_g70650_i0forward_frame_3 - 0.38 10.4 5.3 0.44 10.1 5.3 1.1 1 0 0 1 1 1 0 Baculovirus 11 kDa family HTH_Tnp_Tc3_1 PF11427.8 NODE_78590_length_201_cov_1.445783_g70649_i0forward_frame_3 - 0.025 14.4 0.5 0.042 13.7 0.5 1.3 1 0 0 1 1 1 0 Tc3 transposase LapA_dom PF06305.11 NODE_78589_length_201_cov_1.445783_g70648_i0forward_frame_3 - 0.23 11.3 4.7 0.47 10.3 4.7 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain NEAT PF05031.12 NODE_78584_length_201_cov_1.445783_g70643_i0reverse_frame_2 - 0.022 15.4 0.7 0.024 15.2 0.7 1.0 1 0 0 1 1 1 0 Iron Transport-associated domain Amelogenin PF02948.15 NODE_78581_length_201_cov_1.445783_g70640_i0forward_frame_3 - 0.067 13.8 0.5 0.068 13.8 0.5 1.0 1 0 0 1 1 1 0 Amelogenin ketoacyl-synt PF00109.26 NODE_78581_length_201_cov_1.445783_g70640_i0forward_frame_2 - 4.1e-15 56.0 0.1 4.5e-15 55.9 0.1 1.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain I-EGF_1 PF18372.1 NODE_78578_length_201_cov_1.445783_g70637_i0reverse_frame_3 - 0.15 12.2 1.3 0.21 11.7 1.3 1.3 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 DUF3913 PF13052.6 NODE_78578_length_201_cov_1.445783_g70637_i0reverse_frame_2 - 0.1 12.9 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3913) AZUL PF16558.5 NODE_78578_length_201_cov_1.445783_g70637_i0forward_frame_2 - 0.11 12.8 0.1 0.14 12.4 0.1 1.2 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A Lamprin PF06403.11 NODE_78573_length_201_cov_1.481928_g70632_i0forward_frame_3 - 0.11 12.5 1.7 0.13 12.2 1.7 1.2 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_78570_length_201_cov_1.506024_g70629_i0forward_frame_3 - 0.019 14.9 2.8 0.019 14.9 2.8 1.1 1 0 0 1 1 1 0 Lamprin PRA1 PF03208.19 NODE_78564_length_201_cov_1.530120_g70623_i0forward_frame_3 - 0.012 15.2 2.3 0.014 15.1 2.3 1.0 1 0 0 1 1 1 0 PRA1 family protein HTH_Tnp_Tc3_1 PF11427.8 NODE_78561_length_201_cov_1.536145_g70620_i0reverse_frame_2 - 0.13 12.1 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Tc3 transposase GnsAB_toxin PF08178.11 NODE_78551_length_201_cov_1.584337_g70610_i0forward_frame_2 - 8.6e-19 67.2 0.2 1.1e-18 66.9 0.2 1.1 1 0 0 1 1 1 1 GnsA/GnsB toxin of bacterial toxin-antitoxin system bPH_5 PF10882.8 NODE_78545_length_201_cov_1.626506_g70604_i0reverse_frame_3 - 0.047 13.8 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial PH domain ERG2_Sigma1R PF04622.12 NODE_78544_length_201_cov_1.632530_g70603_i0reverse_frame_2 - 0.031 13.6 0.3 0.031 13.6 0.3 1.0 1 0 0 1 1 1 0 ERG2 and Sigma1 receptor like protein LEP503 PF15221.6 NODE_78541_length_201_cov_1.650602_g70600_i0forward_frame_3 - 0.13 12.6 0.1 0.16 12.3 0.1 1.1 1 0 0 1 1 1 0 Lens epithelial cell protein LEP503 DUF3704 PF12488.8 NODE_78538_length_201_cov_1.656627_g70597_i0forward_frame_2 - 0.25 11.0 0.6 0.25 11.0 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3704) 2-ph_phosp PF04029.14 NODE_78535_length_201_cov_1.668675_g70594_i0reverse_frame_3 - 0.0021 17.3 0.3 0.0021 17.3 0.3 1.0 1 0 0 1 1 1 1 2-phosphosulpholactate phosphatase PDEase_I_N PF08499.12 NODE_78532_length_201_cov_1.680723_g70591_i0reverse_frame_2 - 0.0064 16.3 0.0 0.008 16.0 0.0 1.2 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase N-terminal Plasmodium_Vir PF05795.11 NODE_78532_length_201_cov_1.680723_g70591_i0reverse_frame_2 - 0.093 12.1 0.5 0.1 12.0 0.5 1.0 1 0 0 1 1 1 0 Plasmodium vivax Vir protein Hap4_Hap_bind PF10297.9 NODE_78530_length_201_cov_1.686747_g70589_i0reverse_frame_3 - 0.0088 16.1 0.1 0.018 15.2 0.1 1.5 1 0 0 1 1 1 1 Minimal binding motif of Hap4 for binding to Hap2/3/5 PET PF06297.14 NODE_78529_length_201_cov_1.716867_g70588_i0forward_frame_2 - 0.047 14.0 0.0 0.05 13.9 0.0 1.1 1 0 0 1 1 1 0 PET Domain GP79 PF17463.2 NODE_78524_length_201_cov_1.771084_g70583_i0reverse_frame_2 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Gene product 79 polyprenyl_synt PF00348.17 NODE_78522_length_201_cov_1.813253_g70581_i0reverse_frame_2 - 6.4e-23 81.1 0.2 6.5e-23 81.1 0.2 1.0 1 0 0 1 1 1 1 Polyprenyl synthetase DUF1385 PF07136.11 NODE_78519_length_201_cov_1.837349_g70578_i0reverse_frame_2 - 0.13 11.6 3.2 0.14 11.4 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) V-set_CD47 PF08204.11 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_2 - 0.038 14.0 0.3 0.038 14.0 0.3 1.1 1 0 0 1 1 1 0 CD47 immunoglobulin-like domain FBPase_2 PF06874.11 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_2 - 0.25 9.6 4.2 0.28 9.4 4.2 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase MatE PF01554.18 NODE_78515_length_201_cov_1.861446_g70574_i0reverse_frame_3 - 0.0072 16.0 0.9 0.0076 15.9 0.9 1.0 1 0 0 1 1 1 1 MatE Mst1_SARAH PF11629.8 NODE_78514_length_201_cov_1.867470_g70573_i0forward_frame_3 - 0.014 15.5 0.1 0.022 14.8 0.1 1.3 1 0 0 1 1 1 0 C terminal SARAH domain of Mst1 DUF5529 PF17669.1 NODE_78511_length_201_cov_1.879518_g70570_i0forward_frame_2 - 0.039 14.0 1.1 0.041 13.9 1.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5529) Adeno_E3_14_5 PF04834.12 NODE_78511_length_201_cov_1.879518_g70570_i0forward_frame_2 - 0.053 14.1 0.0 0.06 13.9 0.0 1.1 1 0 0 1 1 1 0 Early E3 14.5 kDa protein RNase_PH PF01138.21 NODE_78510_length_201_cov_1.885542_g70569_i0forward_frame_2 - 0.01 16.4 0.0 0.01 16.3 0.0 1.1 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 WSK PF03832.13 NODE_78510_length_201_cov_1.885542_g70569_i0forward_frame_2 - 0.11 12.2 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 WSK motif RSV_NS2 PF03113.14 NODE_78508_length_201_cov_1.903614_g70567_i0reverse_frame_2 - 0.043 13.8 0.5 0.048 13.7 0.5 1.0 1 0 0 1 1 1 0 Respiratory synctial virus non-structural protein NS2 Sulfatase PF00884.23 NODE_78502_length_201_cov_1.927711_g70561_i0forward_frame_3 - 2.6e-21 76.3 0.1 2.8e-21 76.2 0.1 1.0 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 NODE_78502_length_201_cov_1.927711_g70561_i0forward_frame_3 - 0.0023 17.6 0.0 0.0023 17.6 0.0 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Rieske_2 PF13806.6 NODE_78501_length_201_cov_1.927711_g70560_i0forward_frame_2 - 0.1 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain Mvb12 PF09452.10 NODE_78496_length_201_cov_1.993976_g70555_i0reverse_frame_2 - 0.14 12.6 0.7 0.21 12.0 0.7 1.3 1 0 0 1 1 1 0 ESCRT-I subunit Mvb12 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks377.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks377.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks377.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks377.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:23:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- N_BRCA1_IG PF16158.5 NODE_78483_length_201_cov_2.072289_g70542_i0reverse_frame_2 - 0.0004 21.1 0.0 0.00045 20.9 0.0 1.2 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene zf-LITAF-like PF10601.9 NODE_78478_length_201_cov_2.150602_g70537_i0forward_frame_2 - 9.3e-05 22.6 0.3 0.00013 22.1 0.3 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Cys_rich_KTR PF14205.6 NODE_78478_length_201_cov_2.150602_g70537_i0forward_frame_2 - 0.016 15.0 0.3 0.022 14.6 0.3 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR DUF3797 PF12677.7 NODE_78478_length_201_cov_2.150602_g70537_i0forward_frame_2 - 0.044 13.7 0.2 0.057 13.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) ribosomal_L24 PF17136.4 NODE_78478_length_201_cov_2.150602_g70537_i0forward_frame_2 - 0.19 12.2 4.3 0.38 11.2 4.3 1.7 1 1 0 1 1 1 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 CaM_bdg_C0 PF10562.9 NODE_78476_length_201_cov_2.162651_g70535_i0reverse_frame_3 - 0.036 14.1 3.0 0.036 14.1 3.0 1.8 2 0 0 2 2 2 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit Pkinase PF00069.25 NODE_78475_length_201_cov_2.162651_g70534_i0reverse_frame_3 - 9.9e-05 21.8 0.1 0.00012 21.6 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF3975 PF13126.6 NODE_78470_length_201_cov_2.228916_g70529_i0reverse_frame_3 - 0.16 12.4 3.2 0.18 12.3 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) MIF4G PF02854.19 NODE_78463_length_201_cov_2.277108_g70522_i0reverse_frame_3 - 0.0097 15.6 0.5 0.01 15.5 0.5 1.0 1 0 0 1 1 1 1 MIF4G domain MHC_I_2 PF14586.6 NODE_78450_length_201_cov_2.439759_g70509_i0reverse_frame_2 - 0.15 11.9 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Class I Histocompatibility antigen, NKG2D ligand, domains 1 and 2 Pkinase PF00069.25 NODE_78447_length_201_cov_2.560241_g70506_i0reverse_frame_2 - 0.0028 17.1 0.0 0.0032 16.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain FPV060 PF17614.2 NODE_78445_length_201_cov_2.590361_g70504_i0forward_frame_3 - 0.16 11.3 0.9 0.16 11.3 0.9 1.1 1 0 0 1 1 1 0 Viral CC-type chemokine PAN_3 PF08277.12 NODE_78440_length_201_cov_2.728916_g70499_i0forward_frame_2 - 0.076 12.8 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 PAN-like domain B3_4 PF03483.17 NODE_78433_length_201_cov_2.825301_g70492_i0reverse_frame_3 - 0.17 11.6 0.1 0.18 11.5 0.1 1.1 1 0 0 1 1 1 0 B3/4 domain PEARLI-4 PF05278.12 NODE_78429_length_201_cov_2.987952_g70488_i0reverse_frame_2 - 0.039 13.6 0.1 0.044 13.4 0.1 1.0 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) Inhibitor_Mig-6 PF11555.8 NODE_78428_length_201_cov_3.084337_g70487_i0reverse_frame_3 - 0.076 13.1 4.9 0.093 12.8 4.9 1.2 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 HTH_6 PF01418.17 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 6.2e-18 64.6 0.8 7.2e-18 64.3 0.8 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family HTH_50 PF18024.1 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 3.5e-05 23.3 1.4 5.8e-05 22.6 0.2 1.9 2 1 0 2 2 2 1 Helix-turn-helix domain Rrf2 PF02082.20 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.0079 16.5 0.1 0.0089 16.4 0.1 1.1 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.01 16.0 0.1 0.015 15.5 0.1 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_10 PF04967.12 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.02 14.7 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain MarR PF01047.22 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.021 14.8 0.0 0.032 14.2 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.03 14.3 0.0 0.036 14.0 0.0 1.2 1 0 0 1 1 1 0 HTH domain MarR_2 PF12802.7 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.032 14.1 0.1 0.044 13.7 0.1 1.2 1 0 0 1 1 1 0 MarR family NUMOD1 PF07453.13 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.049 13.9 0.0 0.11 12.8 0.0 1.6 1 0 0 1 1 1 0 NUMOD1 domain HTH_Tnp_1_2 PF13022.6 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.078 13.1 0.0 0.091 12.9 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase TnsD PF15978.5 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.096 11.7 0.1 0.096 11.7 0.1 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D Put_DNA-bind_N PF06971.13 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.096 12.7 0.8 0.16 12.0 0.8 1.4 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus HTH_28 PF13518.6 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.13 12.4 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.14 12.1 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT UPF0016 PF01169.19 NODE_78426_length_201_cov_3.204819_g70485_i0reverse_frame_3 - 0.069 13.5 0.0 0.069 13.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0016 RepA1_leader PF08048.12 NODE_78424_length_201_cov_3.373494_g70483_i0reverse_frame_3 - 0.025 14.8 3.2 0.039 14.2 1.3 2.0 2 0 0 2 2 2 0 Tap RepA1 leader peptide Caveolin PF01146.17 NODE_78423_length_201_cov_3.427711_g70482_i0reverse_frame_3 - 0.054 13.4 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 Caveolin COX2_TM PF02790.15 NODE_78421_length_201_cov_3.548193_g70480_i0reverse_frame_3 - 0.053 13.7 0.1 0.061 13.5 0.1 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain Ge1_WD40 PF16529.5 NODE_78414_length_201_cov_4.500000_g70473_i0forward_frame_2 - 0.00013 21.0 0.0 0.00016 20.7 0.0 1.0 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40 PF00400.32 NODE_78414_length_201_cov_4.500000_g70473_i0forward_frame_2 - 0.00034 21.3 0.0 0.0006 20.6 0.0 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat DUF3913 PF13052.6 NODE_78403_length_201_cov_23.927711_g70462_i0reverse_frame_3 - 0.16 12.3 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3913) FlhD PF05247.13 NODE_78400_length_201_cov_26.867470_g70459_i0forward_frame_2 - 0.07 13.4 0.0 0.085 13.1 0.0 1.1 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) Fijivirus_P9-2 PF06837.11 NODE_78398_length_201_cov_28.048193_g70457_i0forward_frame_3 - 3.9 6.9 9.7 3.9 6.9 9.7 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein Cadherin_tail PF15974.5 NODE_78396_length_201_cov_32.349398_g70455_i0reverse_frame_2 - 0.0082 16.5 1.2 0.0095 16.3 1.2 1.2 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region NdhL PF10716.9 NODE_78396_length_201_cov_32.349398_g70455_i0forward_frame_3 - 10 6.2 7.8 15 5.6 7.8 1.3 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit MHCassoc_trimer PF08831.10 NODE_78392_length_201_cov_35.536145_g70451_i0reverse_frame_3 - 0.035 14.1 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 Class II MHC-associated invariant chain trimerisation domain TMEMspv1-c74-12 PF11044.8 NODE_78380_length_201_cov_47.132530_g70439_i0reverse_frame_2 - 0.99 9.4 7.4 1.6 8.8 7.4 1.3 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein GRP PF07172.11 NODE_78376_length_201_cov_50.138554_g70435_i0forward_frame_2 - 0.76 10.5 13.9 0.9 10.3 13.9 1.1 1 0 0 1 1 1 0 Glycine rich protein family DUF5444 PF17519.2 NODE_78349_length_201_cov_86.897590_g70408_i0reverse_frame_2 - 0.053 13.5 0.0 0.37 10.8 0.0 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5444) Calpain_III PF01067.22 NODE_78345_length_201_cov_108.150602_g70404_i0forward_frame_2 - 0.013 15.7 0.2 0.014 15.7 0.2 1.0 1 0 0 1 1 1 0 Calpain large subunit, domain III HWE_HK PF07536.14 NODE_78344_length_201_cov_109.554217_g70403_i0reverse_frame_3 - 0.066 13.9 0.0 0.079 13.7 0.0 1.1 1 0 0 1 1 1 0 HWE histidine kinase ATP-synt_F PF01990.17 NODE_78343_length_201_cov_110.993976_g70402_i0reverse_frame_3 - 0.22 11.9 0.0 0.26 11.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase (F/14-kDa) subunit PRT_C PF08372.10 NODE_78342_length_201_cov_114.349398_g70401_i0forward_frame_3 - 0.041 13.6 2.2 0.045 13.5 2.2 1.0 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal RMI2 PF16100.5 NODE_78339_length_201_cov_139.765060_g70398_i0reverse_frame_3 - 0.093 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 Inhibitor_Mig-6 PF11555.8 NODE_78331_length_201_cov_180.403614_g70390_i0reverse_frame_3 - 0.015 15.4 0.1 0.021 14.9 0.1 1.3 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 CTXphi_pIII-N1 PF16710.5 NODE_78331_length_201_cov_180.403614_g70390_i0forward_frame_3 - 0.1 12.7 0.1 0.13 12.4 0.1 1.0 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII Ferlin_C PF16165.5 NODE_78325_length_201_cov_258.981928_g70384_i0forward_frame_3 - 0.096 12.6 2.6 0.11 12.4 2.6 1.1 1 0 0 1 1 1 0 Ferlin C-terminus zf-C3H1 PF10650.9 NODE_78321_length_201_cov_662.373494_g70380_i0reverse_frame_3 - 0.98 9.2 2.9 1.2 8.9 0.7 2.0 2 0 0 2 2 2 0 Putative zinc-finger domain zf-RING_4 PF14570.6 NODE_78320_length_201_cov_1288.939759_g70379_i0reverse_frame_2 - 0.084 12.7 2.9 0.13 12.0 0.4 2.0 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain Flu_NS1 PF00600.19 ORF9979 - 0.07 12.7 0.0 0.077 12.5 0.0 1.1 1 0 0 1 1 1 0 Influenza non-structural protein (NS1) PDEase_I_N PF08499.12 ORF99745 - 0.0055 16.5 0.0 0.0079 16.0 0.0 1.2 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase N-terminal CARD PF00619.21 ORF99338 - 0.0017 18.3 0.3 0.0021 18.1 0.3 1.1 1 0 0 1 1 1 1 Caspase recruitment domain Fer4_12 PF13353.6 ORF99338 - 0.14 12.4 0.0 0.15 12.3 0.0 1.0 1 0 0 1 1 1 0 4Fe-4S single cluster domain 14-3-3 PF00244.20 ORF98758 - 0.1 12.1 0.1 0.1 12.1 0.1 1.1 1 0 0 1 1 1 0 14-3-3 protein Papo_T_antigen PF02380.15 ORF98700 - 0.11 12.7 1.0 0.12 12.5 1.0 1.1 1 0 0 1 1 1 0 T-antigen specific domain MMS19_C PF12460.8 ORF9834 - 0.04 13.0 0.0 0.04 13.0 0.0 1.0 1 0 0 1 1 1 0 RNAPII transcription regulator C-terminal STAG PF08514.11 ORF983 - 0.052 13.5 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 STAG domain CST-I PF06002.12 ORF98273 - 0.036 13.8 0.1 0.037 13.8 0.1 1.1 1 0 0 1 1 1 0 Alpha-2,3-sialyltransferase (CST-I) Peptidase_A21 PF03566.13 ORF98254 - 0.76 8.0 10.5 0.81 7.9 10.5 1.0 1 0 0 1 1 1 0 Peptidase family A21 PGI PF00342.19 ORF98254 - 5.2 5.5 8.2 5.6 5.4 8.2 1.0 1 0 0 1 1 1 0 Phosphoglucose isomerase DUF2290 PF10053.9 ORF98112 - 0.0011 18.5 0.1 0.0013 18.3 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2290) FabA PF07977.13 ORF98067 - 0.0014 18.3 0.1 0.0015 18.1 0.1 1.1 1 0 0 1 1 1 1 FabA-like domain KKLCAg1 PF15204.6 ORF98067 - 0.015 15.4 0.1 0.018 15.1 0.1 1.2 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 Ribonuc_L-PSP PF01042.21 ORF98038 - 0.062 13.3 0.2 0.068 13.2 0.2 1.1 1 0 0 1 1 1 0 Endoribonuclease L-PSP DUP PF00674.18 ORF97924 - 9.4 6.4 10.5 12 6.1 10.5 1.2 1 0 0 1 1 1 0 DUP family Holin_SPP1 PF04688.13 ORF97716 - 0.0049 17.0 0.1 0.0067 16.6 0.1 1.2 1 0 0 1 1 1 1 SPP1 phage holin DUF726 PF05277.12 ORF97716 - 0.04 12.8 0.0 0.041 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF726) B2-adapt-app_C PF09066.10 ORF97636 - 5e-07 29.8 0.1 5.2e-07 29.7 0.1 1.0 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain Cyd_oper_YbgE PF09600.10 ORF97547 - 1.2e-26 92.8 4.0 1.4e-26 92.7 4.0 1.0 1 0 0 1 1 1 1 Cyd operon protein YbgE (Cyd_oper_YbgE) Form-deh_trans PF09163.11 ORF97547 - 0.41 10.4 3.2 0.62 9.9 0.3 2.1 1 1 1 2 2 2 0 Formate dehydrogenase N, transmembrane S-AdoMet_synt_C PF02773.16 ORF96904 - 0.081 12.9 0.0 0.09 12.8 0.0 1.0 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain SR-25 PF10500.9 ORF9590 - 3.4 7.2 8.4 4.2 6.9 8.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Mito_carr PF00153.27 ORF95747 - 2.5e-10 40.1 0.7 1.5e-09 37.7 0.1 1.9 2 0 0 2 2 2 1 Mitochondrial carrier protein Pilus_CpaD PF09476.10 ORF95747 - 0.0044 16.8 0.0 0.0046 16.7 0.0 1.1 1 0 0 1 1 1 1 Pilus biogenesis CpaD protein (pilus_cpaD) LapA_dom PF06305.11 ORF95747 - 0.079 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF2290 PF10053.9 ORF95635 - 0.0011 18.5 0.1 0.0013 18.3 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2290) QVR PF17064.5 ORF95455 - 0.0016 18.6 1.4 0.0017 18.6 1.4 1.0 1 0 0 1 1 1 1 Sleepless protein Toxin_14 PF07829.11 ORF95170 - 0.057 13.4 1.2 0.077 12.9 0.3 1.7 2 0 0 2 2 2 0 Alpha-A conotoxin PIVA-like protein Ribosomal_L29e PF01779.17 ORF94859 - 3.2e-20 72.2 9.3 3.2e-20 72.2 9.3 1.9 1 1 1 2 2 2 1 Ribosomal L29e protein family DUF5579 PF17742.1 ORF94735 - 0.02 14.4 0.1 0.021 14.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5579) Cupin_2 PF07883.11 ORF94706 - 0.0004 20.0 0.0 0.00051 19.7 0.0 1.2 1 0 0 1 1 1 1 Cupin domain ArsA_HSP20 PF17886.1 ORF94617 - 0.011 15.3 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 0 HSP20-like domain found in ArsA PAN_3 PF08277.12 ORF93862 - 0.042 13.6 0.2 0.05 13.4 0.2 1.3 1 0 0 1 1 1 0 PAN-like domain Dimerisation PF08100.11 ORF93634 - 0.044 13.8 0.0 0.061 13.4 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain DUF3119 PF11317.8 ORF92965 - 0.78 10.0 5.8 0.89 9.8 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3119) FixH PF05751.11 ORF92956 - 1.8 8.6 3.8 2.1 8.3 3.8 1.1 1 0 0 1 1 1 0 FixH TMF_DNA_bd PF12329.8 ORF92902 - 0.0023 17.9 2.0 0.0029 17.6 2.0 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding SAB PF04382.13 ORF92902 - 0.42 10.7 2.0 0.67 10.1 0.4 2.0 1 1 1 2 2 2 0 SAB domain Oxidored_q5_N PF01059.17 ORF9271 - 0.13 12.4 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus MBOAT_2 PF13813.6 ORF92638 - 0.055 13.7 0.2 0.064 13.5 0.2 1.2 1 0 0 1 1 1 0 Membrane bound O-acyl transferase family Peptidase_M74 PF03411.13 ORF92638 - 0.26 10.8 1.9 0.27 10.8 1.9 1.1 1 0 0 1 1 1 0 Penicillin-insensitive murein endopeptidase TPR_4 PF07721.14 ORF92557 - 0.036 14.7 1.8 0.036 14.7 1.8 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat Peptidase_M17 PF00883.21 ORF92405 - 9.1e-06 25.2 0.0 9.3e-06 25.1 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain ASRT PF07100.11 ORF92053 - 0.11 12.6 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Anabaena sensory rhodopsin transducer Mito_carr PF00153.27 ORF91875 - 0.016 15.1 0.8 0.19 11.7 0.0 2.0 2 0 0 2 2 2 0 Mitochondrial carrier protein zf-ANAPC11 PF12861.7 ORF9114 - 0.0085 16.1 1.1 0.01 15.9 1.1 1.3 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-ZPR1 PF03367.13 ORF91105 - 0.061 13.2 4.9 0.069 13.0 4.9 1.0 1 0 0 1 1 1 0 ZPR1 zinc-finger domain YabA PF06156.13 ORF91105 - 0.66 10.6 10.4 0.71 10.6 10.4 1.0 1 0 0 1 1 1 0 Initiation control protein YabA U1snRNP70_N PF12220.8 ORF91105 - 2 9.1 9.6 2.2 9.0 9.6 1.1 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal FHA PF00498.26 ORF90641 - 8.3e-12 45.3 0.1 9.4e-12 45.1 0.1 1.1 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF90641 - 0.00013 22.2 0.0 0.00014 22.1 0.0 1.0 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Peptidase_C12 PF01088.21 ORF90228 - 1.1e-10 41.6 0.0 1.3e-10 41.4 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 DUF3721 PF12518.8 ORF90126 - 0.16 11.8 0.1 0.27 11.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function Cupin_2 PF07883.11 ORF901 - 0.0004 20.0 0.0 0.00051 19.7 0.0 1.2 1 0 0 1 1 1 1 Cupin domain NHL PF01436.21 ORF89897 - 0.029 14.4 0.1 0.14 12.3 0.0 1.9 2 0 0 2 2 2 0 NHL repeat Reg_prop PF07494.11 ORF89897 - 0.03 14.5 0.0 0.08 13.2 0.0 1.7 1 0 0 1 1 1 0 Two component regulator propeller DUF2264 PF10022.9 ORF89637 - 0.0086 15.2 0.0 0.0086 15.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2264) DUF4274 PF14096.6 ORF8898 - 0.079 12.9 0.1 0.13 12.3 0.0 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4274) DUF3966 PF13110.6 ORF88603 - 0.076 12.9 1.5 0.11 12.4 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3966) UPF0300 PF08594.10 ORF88122 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) Paramyx_P_V_C PF03210.13 ORF8801 - 0.29 10.9 4.6 0.35 10.6 4.6 1.1 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal Doppel PF11466.8 ORF86782 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel EMC3_TMCO1 PF01956.16 ORF86544 - 0.94 9.2 4.3 0.98 9.1 4.3 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like ALF PF03752.13 ORF86419 - 0.023 14.7 0.6 0.036 14.0 0.6 1.3 1 0 0 1 1 1 0 Short repeats of unknown function MORN PF02493.20 ORF86073 - 6.4e-19 66.6 24.5 3.1e-10 39.3 1.9 4.0 4 0 0 4 4 4 3 MORN repeat Phytochelatin PF05023.14 ORF85572 - 0.062 12.5 0.0 0.065 12.4 0.0 1.0 1 0 0 1 1 1 0 Phytochelatin synthase Pkinase PF00069.25 ORF85359 - 9.6e-14 51.4 1.3 1e-13 51.3 1.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85359 - 1.8e-06 27.4 0.2 2e-06 27.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase SR-25 PF10500.9 ORF85228 - 1.8 8.1 12.9 1.9 8.0 12.9 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Palm_thioest PF02089.15 ORF84853 - 3.6e-08 33.6 0.0 3.6e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DbpA PF03880.15 ORF84246 - 0.018 15.0 0.2 0.025 14.6 0.2 1.3 1 1 0 1 1 1 0 DbpA RNA binding domain La PF05383.17 ORF84246 - 0.04 14.0 0.1 0.051 13.6 0.1 1.5 1 1 0 1 1 1 0 La domain PAN_3 PF08277.12 ORF84150 - 0.042 13.6 0.2 0.05 13.4 0.2 1.3 1 0 0 1 1 1 0 PAN-like domain DUF1296 PF06972.11 ORF8374 - 0.00044 20.3 0.0 0.00059 19.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1296) SAPIS-gp6 PF16722.5 ORF8374 - 0.037 14.4 0.6 0.043 14.2 0.6 1.2 1 0 0 1 1 1 0 Pathogenicity island protein gp6 in Staphylococcus DUF751 PF05421.11 ORF8366 - 0.0067 17.1 0.1 0.0084 16.8 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF751) PcfJ PF14284.6 ORF83215 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 PcfJ-like protein Toxin_21 PF08091.11 ORF83026 - 0.042 13.8 0.0 0.057 13.3 0.0 1.2 1 0 0 1 1 1 0 Spider insecticidal peptide DUF5316 PF17247.2 ORF82781 - 0.071 13.1 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5316) CFC PF09443.10 ORF82642 - 0.03 14.2 9.5 0.32 10.9 1.6 2.3 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) DUF4186 PF13811.6 ORF82455 - 0.48 10.5 4.2 0.51 10.4 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) DUF3772 PF12607.8 ORF8189 - 0.025 14.4 1.0 0.54 10.1 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3772) Neuraminidase PF18413.1 ORF81520 - 0.046 13.4 0.4 0.051 13.2 0.4 1.0 1 0 0 1 1 1 0 Neuraminidase-like domain Peptidase_M3_N PF08439.10 ORF81288 - 0.036 14.3 0.2 0.054 13.8 0.1 1.5 1 1 0 1 1 1 0 Oligopeptidase F DUF2303 PF10065.9 ORF81288 - 0.038 13.1 0.1 0.04 13.1 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) AZUL PF16558.5 ORF80877 - 0.089 13.0 1.4 0.12 12.6 1.4 1.2 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A DUF3483 PF11982.8 ORF80726 - 0.037 13.7 0.1 0.043 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3483) SyrA PF11089.8 ORF80433 - 0.02 14.9 1.8 0.62 10.2 0.0 2.1 1 1 1 2 2 2 0 Exopolysaccharide production repressor DUF3361 PF11841.8 ORF79935 - 0.011 15.7 0.3 0.011 15.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3361) HIF-1a_CTAD PF08778.10 ORF79935 - 0.079 12.6 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 HIF-1 alpha C terminal transactivation domain UPF0300 PF08594.10 ORF79887 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) DUF1003 PF06210.11 ORF79602 - 4.5 7.4 5.3 5 7.3 5.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) DUF2806 PF10987.8 ORF79592 - 0.003 17.5 0.2 0.0033 17.3 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2806) MqsA_antitoxin PF15731.5 ORF79336 - 0.11 12.6 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Pkinase_Tyr PF07714.17 ORF79071 - 0.0035 16.6 0.0 0.0035 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase PRRSV_Env PF02340.15 ORF78759 - 0.37 10.1 2.8 0.43 9.9 2.8 1.0 1 0 0 1 1 1 0 PRRSV putative envelope protein PAP1 PF08601.10 ORF78667 - 1.6 8.4 7.0 1.6 8.4 7.0 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 NCD1 PF04904.13 ORF78321 - 0.063 13.3 0.3 1.2 9.2 0.0 2.3 1 1 1 2 2 2 0 NAB conserved region 1 (NCD1) Prenyltrans PF00432.21 ORF78321 - 0.13 12.0 1.4 0.66 9.8 0.1 2.1 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat PuR_N PF09182.10 ORF77486 - 0.053 13.5 0.1 0.066 13.1 0.1 1.3 1 1 0 1 1 1 0 Bacterial purine repressor, N-terminal AvrB_AvrC PF05394.11 ORF77486 - 0.064 12.5 0.2 0.065 12.4 0.2 1.0 1 0 0 1 1 1 0 Avirulence protein Ribosomal_60s PF00428.19 ORF77152 - 4.4e-07 30.4 6.5 5e-07 30.2 6.5 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein FoP_duplication PF13865.6 ORF77152 - 0.024 15.2 0.7 0.026 15.1 0.7 1.1 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 COBRA PF04833.15 ORF77115 - 0.016 15.1 0.5 0.017 15.0 0.5 1.1 1 0 0 1 1 1 0 COBRA-like protein zf-CCCH_7 PF18586.1 ORF77036 - 0.62 10.4 3.3 11 6.5 0.0 2.0 1 1 1 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 K1 PF02960.14 ORF76932 - 0.12 12.5 0.8 0.13 12.4 0.8 1.1 1 0 0 1 1 1 0 K1 glycoprotein DUF499 PF04465.12 ORF76898 - 0.084 10.6 0.1 0.08 10.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF499) DUF2809 PF10990.8 ORF76898 - 0.096 13.4 0.7 0.11 13.2 0.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2809) Thioredoxin_6 PF13848.6 ORF76771 - 5.2e-06 26.5 0.1 6e-06 26.3 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin-like domain TTL PF03133.15 ORF76762 - 1.1e-15 57.6 0.0 1.1e-15 57.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF76762 - 2.3e-06 27.1 0.0 2.6e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF76762 - 0.002 17.4 0.0 0.002 17.4 0.0 1.1 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF76762 - 0.17 11.4 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus DUF4379 PF14311.6 ORF76699 - 0.3 11.5 3.6 0.83 10.1 3.5 1.8 1 1 1 2 2 2 0 Probable Zinc-ribbon domain Wzz PF02706.15 ORF76059 - 0.17 12.2 2.6 0.19 12.0 2.6 1.2 1 0 0 1 1 1 0 Chain length determinant protein DUF3280 PF11684.8 ORF7597 - 0.081 13.3 0.2 0.089 13.2 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2380) Nuc_recep-AF1 PF11825.8 ORF75864 - 0.041 13.9 0.5 0.043 13.9 0.5 1.1 1 0 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 zf-MYND PF01753.18 ORF75857 - 0.4 10.8 7.3 0.56 10.3 7.3 1.7 1 1 0 1 1 1 0 MYND finger Sulfotransfer_1 PF00685.27 ORF75716 - 9.6e-05 22.0 0.3 9.6e-05 22.0 0.3 1.0 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF75716 - 0.0024 18.3 0.0 0.0025 18.2 0.0 1.1 1 0 0 1 1 1 1 Sulfotransferase family SNARE PF05739.19 ORF75385 - 1.4 9.0 4.0 2.3 8.3 4.0 1.3 1 0 0 1 1 1 0 SNARE domain Pyrophosphatase PF00719.19 ORF75166 - 1.6e-09 37.8 0.0 1.6e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Inorganic pyrophosphatase PDEase_I_N PF08499.12 ORF74794 - 0.0055 16.5 0.0 0.0079 16.0 0.0 1.2 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase N-terminal Fe-S_assembly PF04384.13 ORF74404 - 1.5e-32 112.0 2.0 1.6e-32 111.9 2.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster assembly Flagellar_put PF12611.8 ORF74259 - 0.17 11.7 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Putative flagellar CSD PF00313.22 ORF74258 - 2.3e-33 113.8 0.3 2.5e-33 113.7 0.3 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF74258 - 3.2e-05 23.5 0.2 5.1e-05 22.9 0.2 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF3813 PF12758.7 ORF74220 - 0.0047 17.2 0.8 0.0061 16.9 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3813) YfcL PF08891.11 ORF74220 - 0.043 14.2 0.3 0.1 12.9 0.3 1.6 1 1 0 1 1 1 0 YfcL protein Tctex-1 PF03645.13 ORF74220 - 0.097 12.9 0.4 0.12 12.7 0.4 1.1 1 0 0 1 1 1 0 Tctex-1 family YqzH PF14164.6 ORF74220 - 0.12 12.4 0.7 0.15 12.2 0.7 1.1 1 0 0 1 1 1 0 YqzH-like protein NES_C_h PF18208.1 ORF73705 - 0.025 14.8 0.8 0.032 14.5 0.8 1.1 1 0 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain HALZ PF02183.18 ORF73705 - 0.088 13.0 0.2 0.18 12.1 0.2 1.5 1 0 0 1 1 1 0 Homeobox associated leucine zipper PAN_3 PF08277.12 ORF7250 - 0.042 13.6 0.2 0.05 13.4 0.2 1.3 1 0 0 1 1 1 0 PAN-like domain Enkurin PF13864.6 ORF72423 - 2e-14 53.8 5.3 2.1e-14 53.7 5.3 1.0 1 0 0 1 1 1 1 Calmodulin-binding Occludin_ELL PF07303.13 ORF72423 - 0.066 13.9 0.9 0.074 13.8 0.9 1.1 1 0 0 1 1 1 0 Occludin homology domain DUF1664 PF07889.12 ORF72423 - 0.079 13.0 0.6 0.092 12.8 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) NuA4 PF09340.10 ORF72423 - 0.12 12.3 4.5 1.2 9.1 0.2 2.1 1 1 1 2 2 2 0 Histone acetyltransferase subunit NuA4 Pkinase PF00069.25 ORF7183 - 2.5e-14 53.3 0.0 2.7e-14 53.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7183 - 9.8e-07 28.3 0.0 9.8e-07 28.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase LppA PF16708.5 ORF71631 - 0.017 15.1 0.3 0.017 15.0 0.3 1.1 1 0 0 1 1 1 0 Lipoprotein confined to pathogenic Mycobacterium FBA_2 PF07735.17 ORF71390 - 0.057 13.5 1.4 0.11 12.6 0.5 1.8 1 1 1 2 2 2 0 F-box associated Mito_carr PF00153.27 ORF71349 - 0.016 15.1 0.8 0.19 11.7 0.0 2.0 2 0 0 2 2 2 0 Mitochondrial carrier protein DUF682 PF05081.12 ORF71211 - 0.0099 15.6 0.1 0.011 15.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF682) GRDP-like PF07173.12 ORF71211 - 0.046 14.4 0.0 0.065 13.9 0.0 1.3 1 0 0 1 1 1 0 Glycine-rich domain-containing protein-like Palm_thioest PF02089.15 ORF70954 - 3.6e-08 33.6 0.0 3.6e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Palm_thioest PF02089.15 ORF70771 - 3.6e-08 33.6 0.0 3.6e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase UPF0300 PF08594.10 ORF70728 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) DUF4884 PF16225.5 ORF70700 - 0.14 12.3 0.1 0.22 11.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4884) SIMPL PF04402.14 ORF70695 - 0.006 17.1 0.1 0.006 17.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF541) SVIP PF15811.5 ORF70695 - 0.027 14.9 7.0 0.043 14.2 7.0 1.4 1 1 0 1 1 1 0 Small VCP/p97-interacting protein Sushi_2 PF09014.10 ORF70462 - 0.045 13.6 0.6 0.052 13.5 0.6 1.2 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain WSK PF03832.13 ORF70214 - 0.17 11.6 0.7 0.42 10.3 0.7 1.6 1 0 0 1 1 1 0 WSK motif Rho_GDI PF02115.17 ORF70145 - 1.2e-18 67.6 0.1 1.2e-18 67.5 0.1 1.0 1 0 0 1 1 1 1 RHO protein GDP dissociation inhibitor Kinesin_assoc PF16183.5 ORF70145 - 0.24 11.6 0.0 0.29 11.3 0.0 1.1 1 0 0 1 1 1 0 Kinesin-associated RNA_pol PF00940.19 ORF70006 - 1.1e-14 54.1 0.1 1.2e-14 54.0 0.1 1.0 1 0 0 1 1 1 1 DNA-dependent RNA polymerase DUF3863 PF12979.7 ORF70006 - 0.13 11.1 0.0 0.13 11.1 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3863) ATP11 PF06644.11 ORF69875 - 0.2 11.4 0.1 0.23 11.2 0.1 1.0 1 0 0 1 1 1 0 ATP11 protein DUF1689 PF07954.11 ORF69493 - 0.33 11.3 0.6 0.36 11.2 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1689) UPF0300 PF08594.10 ORF69261 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) NES_C_h PF18208.1 ORF69035 - 0.025 14.8 0.8 0.032 14.5 0.8 1.1 1 0 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain HALZ PF02183.18 ORF69035 - 0.088 13.0 0.2 0.18 12.1 0.2 1.5 1 0 0 1 1 1 0 Homeobox associated leucine zipper Pox_RNA_pol_35 PF03396.15 ORF68969 - 0.026 13.8 0.6 0.029 13.6 0.6 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 35 kD subunit CadC_C1 PF18500.1 ORF68960 - 0.069 13.3 0.0 0.076 13.1 0.0 1.1 1 0 0 1 1 1 0 CadC C-terminal domain 1 SERTA PF06031.13 ORF68854 - 0.14 11.8 1.1 0.21 11.3 1.1 1.2 1 0 0 1 1 1 0 SERTA motif FrpC PF06901.12 ORF6862 - 0.15 11.6 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 RTX iron-regulated protein FrpC Maf_N PF08383.11 ORF68469 - 0.13 12.0 0.9 0.16 11.8 0.0 1.7 2 1 0 2 2 2 0 Maf N-terminal region DUF5531 PF17671.1 ORF67595 - 0.22 11.4 1.7 0.28 11.1 1.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5531) bZIP_2 PF07716.15 ORF67380 - 2.1e-05 24.5 1.1 2.5e-05 24.3 1.1 1.2 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF67380 - 0.0004 20.4 0.4 0.00044 20.3 0.4 1.2 1 0 0 1 1 1 1 bZIP transcription factor ABC_tran_CTD PF16326.5 ORF67380 - 0.0017 18.5 0.6 0.0018 18.4 0.6 1.2 1 0 0 1 1 1 1 ABC transporter C-terminal domain Head_binding PF09008.10 ORF67380 - 0.013 15.8 0.1 0.014 15.7 0.1 1.0 1 0 0 1 1 1 0 Head binding CLZ PF16526.5 ORF67380 - 0.014 15.8 0.4 0.017 15.5 0.4 1.1 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels H-kinase_dim PF02895.14 ORF67380 - 0.019 15.3 0.1 0.43 11.0 0.1 2.0 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain Casein PF00363.18 ORF67380 - 0.021 15.2 0.4 0.024 15.0 0.4 1.1 1 0 0 1 1 1 0 Casein DUF4354 PF14263.6 ORF67380 - 0.033 14.0 0.1 0.037 13.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) FlxA PF14282.6 ORF67380 - 0.034 14.1 0.4 0.039 13.9 0.4 1.2 1 0 0 1 1 1 0 FlxA-like protein Fib_alpha PF08702.10 ORF67380 - 0.065 13.4 0.9 0.07 13.3 0.9 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2553 PF10830.8 ORF67380 - 0.071 13.9 0.8 0.12 13.2 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2553) Clostridium_P47 PF06597.11 ORF67366 - 7.3 5.2 8.1 8.7 4.9 8.1 1.0 1 0 0 1 1 1 0 Clostridium P-47 protein HTH_Tnp_ISL3 PF13542.6 ORF66468 - 0.031 13.7 0.2 0.043 13.2 0.2 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Med3 PF11593.8 ORF6629 - 0.15 11.3 0.0 0.16 11.1 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal E1-E2_ATPase PF00122.20 ORF65771 - 1.9e-11 43.8 0.3 2e-11 43.7 0.3 1.0 1 0 0 1 1 1 1 E1-E2 ATPase Trans_reg_C PF00486.28 ORF65740 - 4.2e-13 49.2 0.1 4.6e-13 49.0 0.1 1.0 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal DUF659 PF04937.15 ORF65426 - 0.0032 17.3 0.2 0.0036 17.2 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF 659) DUF4658 PF15555.6 ORF65144 - 0.0019 18.3 0.2 0.002 18.2 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) MTBP_N PF14918.6 ORF64884 - 0.026 14.0 0.3 0.026 14.0 0.3 1.1 1 0 0 1 1 1 0 MDM2-binding TetR_C_20 PF17925.1 ORF64725 - 0.32 11.3 2.5 0.24 11.7 1.0 1.6 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Vpu PF00558.19 ORF64230 - 0.079 12.7 0.4 0.092 12.5 0.4 1.1 1 0 0 1 1 1 0 Vpu protein DUF4658 PF15555.6 ORF63880 - 0.0019 18.3 0.2 0.002 18.2 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) Reo_sigmaC_M PF17750.1 ORF63657 - 0.025 14.4 1.7 0.063 13.1 1.7 1.7 1 0 0 1 1 1 0 Reovirus sigma C capsid protein triple beta spiral Stealth_CR3 PF17102.5 ORF63454 - 0.12 12.3 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 Pkinase PF00069.25 ORF63372 - 1.6e-08 34.3 0.0 1.6e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63372 - 0.00015 21.1 0.0 0.00017 21.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Maelstrom PF13017.6 ORF63179 - 0.034 13.8 0.4 0.034 13.8 0.4 1.1 1 0 0 1 1 1 0 piRNA pathway germ-plasm component RgpF PF05045.12 ORF63179 - 0.052 12.3 0.0 0.056 12.2 0.0 1.0 1 0 0 1 1 1 0 Rhamnan synthesis protein F Mitoc_mL59 PF18126.1 ORF6305 - 0.019 15.3 0.1 0.019 15.3 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein mL59 SieB PF14163.6 ORF62999 - 0.55 9.7 3.6 0.46 10.0 2.8 1.4 1 1 0 1 1 1 0 Super-infection exclusion protein B DUF2701 PF10857.8 ORF62346 - 0.1 12.7 2.5 0.13 12.4 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) ArsR PF09824.9 ORF61885 - 0.15 11.6 0.1 0.18 11.4 0.1 1.1 1 0 0 1 1 1 0 ArsR transcriptional regulator MaoC_dehydratas PF01575.19 ORF61056 - 0.089 12.4 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 MaoC like domain Collagen PF01391.18 ORF59955 - 1.3 8.8 21.6 6 6.7 21.6 1.9 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks378.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks378.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks378.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks378.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Zn_Tnp_IS1 PF03811.13 ORF59523 - 0.21 11.4 0.0 0.31 10.8 0.0 1.2 1 0 0 1 1 1 0 InsA N-terminal domain FabA PF07977.13 ORF5942 - 0.0014 18.3 0.1 0.0015 18.1 0.1 1.1 1 0 0 1 1 1 1 FabA-like domain KKLCAg1 PF15204.6 ORF5942 - 0.015 15.4 0.1 0.018 15.1 0.1 1.2 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 DUF5549 PF17703.1 ORF59334 - 0.057 13.1 2.6 0.057 13.1 2.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5549) ABC_tran PF00005.27 ORF59130 - 0.00041 20.9 0.1 0.00083 19.9 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF59130 - 0.00098 19.0 0.0 0.00099 19.0 0.0 1.0 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF59130 - 0.0072 15.8 0.0 0.0072 15.8 0.0 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain HTH_31 PF13560.6 ORF59100 - 0.023 15.1 0.5 0.026 14.8 0.5 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain SR-25 PF10500.9 ORF58917 - 1.8 8.1 12.9 1.9 8.0 12.9 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein GST_N_3 PF13417.6 ORF5873 - 7.4e-09 35.9 0.0 9e-09 35.6 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF5873 - 6.3e-08 32.8 0.0 7.1e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 ORF5873 - 0.00035 20.7 0.1 0.00052 20.2 0.1 1.3 1 1 0 1 1 1 1 Glutaredoxin GST_N_2 PF13409.6 ORF5873 - 0.0012 19.1 0.0 0.0013 18.9 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF1344 PF07076.11 ORF58667 - 0.14 12.1 0.1 0.3 11.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1344) Pox_RNA_pol_35 PF03396.15 ORF58324 - 0.026 13.8 0.6 0.029 13.6 0.6 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 35 kD subunit Paramyx_P_V_C PF03210.13 ORF57415 - 0.29 10.9 4.6 0.35 10.6 4.6 1.1 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal Sigma_reg_N PF13800.6 ORF56875 - 0.57 10.5 5.1 0.6 10.4 4.4 1.4 1 1 0 1 1 1 0 Sigma factor regulator N-terminal Gemini_mov PF01708.16 ORF56875 - 1.9 8.3 4.3 3.3 7.5 4.3 1.5 1 1 0 1 1 1 0 Geminivirus putative movement protein DNA_pol3_beta PF00712.19 ORF56508 - 0.075 13.2 0.0 0.076 13.1 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase III beta subunit, N-terminal domain TPR_12 PF13424.6 ORF56498 - 0.036 14.3 1.2 0.047 14.0 0.0 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat AAA_19 PF13245.6 ORF56395 - 0.0048 17.2 0.0 0.0048 17.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF56395 - 0.02 14.6 0.1 0.022 14.5 0.1 1.0 1 0 0 1 1 1 0 AAA domain UvrD-helicase PF00580.21 ORF56395 - 0.023 14.3 0.4 0.026 14.0 0.4 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain MukF_C PF17193.4 ORF56395 - 0.037 14.2 0.3 0.038 14.1 0.3 1.1 1 0 0 1 1 1 0 MukF C-terminal domain SYS1 PF09801.9 ORF56067 - 0.0012 19.0 1.3 0.0013 18.9 1.3 1.1 1 0 0 1 1 1 1 Integral membrane protein S linking to the trans Golgi network DUF5385 PF17359.2 ORF56067 - 1.7 8.2 2.9 2.2 7.8 2.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) UPF0300 PF08594.10 ORF55979 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) NAD_binding_11 PF14833.6 ORF55943 - 0.0036 17.5 0.1 0.0037 17.5 0.1 1.0 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Imm57 PF15596.6 ORF55943 - 0.0067 16.7 0.0 0.0076 16.6 0.0 1.1 1 0 0 1 1 1 1 Immunity protein 57 DUF851 PF05867.11 ORF55787 - 0.014 14.9 0.1 0.014 14.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF851) Pro_sub2 PF18513.1 ORF5570 - 0.035 14.3 0.7 0.068 13.4 0.4 1.6 1 1 1 2 2 2 0 Prodomain subtilisin 2 DUF4332 PF14229.6 ORF55591 - 0.048 13.9 0.0 0.052 13.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) DUF4674 PF15719.5 ORF55430 - 0.023 14.7 2.2 0.031 14.3 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4674) UCR_TM PF02921.14 ORF55430 - 0.073 13.6 0.1 0.097 13.2 0.1 1.2 1 0 0 1 1 1 0 Ubiquinol cytochrome reductase transmembrane region TLV_coat PF00429.19 ORF54522 - 0.068 11.8 0.0 0.068 11.8 0.0 1.0 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) DUF104 PF01954.16 ORF54203 - 0.069 13.6 0.0 0.097 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF104 Fructosamin_kin PF03881.14 ORF5388 - 2.8e-15 56.3 0.0 3e-15 56.2 0.0 1.0 1 0 0 1 1 1 1 Fructosamine kinase Apq12 PF12716.7 ORF53870 - 9.2 6.3 16.1 1.5 8.8 6.4 2.2 1 1 1 2 2 2 0 Nuclear pore assembly and biogenesis Thioredoxin_6 PF13848.6 ORF53483 - 5.2e-06 26.5 0.1 6e-06 26.3 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin-like domain Histone PF00125.24 ORF53320 - 1.8e-08 34.8 0.1 2.3e-08 34.4 0.1 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID_20kDa PF03847.13 ORF53320 - 0.032 14.7 0.1 0.059 13.9 0.1 1.4 2 0 0 2 2 2 0 Transcription initiation factor TFIID subunit A ImcF-related_N PF14331.6 ORF53320 - 0.083 12.2 0.0 0.096 12.0 0.0 1.1 1 0 0 1 1 1 0 ImcF-related N-terminal domain CBFD_NFYB_HMF PF00808.23 ORF53320 - 0.12 12.6 0.4 0.18 12.1 0.1 1.5 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CotJA PF11007.8 ORF53191 - 0.057 13.3 0.1 0.084 12.7 0.1 1.3 1 0 0 1 1 1 0 Spore coat associated protein JA (CotJA) Asp PF00026.23 ORF53137 - 1.1e-06 28.3 0.5 1.3e-06 28.0 0.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF53137 - 0.00089 19.5 0.1 0.0011 19.2 0.1 1.2 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal UB2H PF14814.6 ORF50598 - 0.0072 16.3 0.1 0.0074 16.3 0.1 1.2 1 0 0 1 1 1 1 Bifunctional transglycosylase second domain Toxin_14 PF07829.11 ORF50205 - 1.3 9.1 6.7 3 7.9 2.5 2.2 2 0 0 2 2 2 0 Alpha-A conotoxin PIVA-like protein MDMPI_N PF11716.8 ORF49874 - 0.064 13.9 0.0 0.073 13.8 0.0 1.1 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain Ndc1_Nup PF09531.10 ORF49388 - 0.94 8.1 4.9 0.23 10.1 2.3 1.3 1 1 0 1 1 1 0 Nucleoporin protein Ndc1-Nup TMEM240 PF15207.6 ORF49377 - 0.049 13.3 0.2 0.054 13.2 0.2 1.1 1 0 0 1 1 1 0 TMEM240 family PLA2G12 PF06951.11 ORF47877 - 0.039 13.9 0.2 0.039 13.9 0.2 1.0 1 0 0 1 1 1 0 Group XII secretory phospholipase A2 precursor (PLA2G12) Serum_albumin PF00273.20 ORF47136 - 0.11 12.3 2.1 0.11 12.2 2.1 1.2 1 0 0 1 1 1 0 Serum albumin family UFC1 PF08694.11 ORF46769 - 2.5e-26 92.2 0.2 2.8e-26 92.0 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin-fold modifier-conjugating enzyme 1 zinc-ribbons_6 PF07191.12 ORF46388 - 0.011 15.7 7.7 0.015 15.3 7.7 1.1 1 0 0 1 1 1 0 zinc-ribbons zf-RING_14 PF17978.1 ORF46388 - 0.017 15.5 5.7 0.02 15.3 5.7 1.1 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain KAAG1 PF15354.6 ORF46357 - 0.08 13.5 3.7 0.099 13.2 3.7 1.2 1 0 0 1 1 1 0 Kidney-associated antigen 1 DnaB PF00772.21 ORF45835 - 0.042 13.9 0.6 0.045 13.8 0.6 1.0 1 0 0 1 1 1 0 DnaB-like helicase N terminal domain DUF979 PF06166.12 ORF45819 - 0.037 13.2 0.1 0.041 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF979) UPF0300 PF08594.10 ORF45740 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) Trimer_CC PF08954.11 ORF4508 - 0.023 14.2 1.7 0.13 11.8 1.7 1.9 1 1 0 1 1 1 0 Trimerisation motif UPF0300 PF08594.10 ORF44714 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) SIP1 PF04938.12 ORF4418 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) DUF2690 PF10901.8 ORF43789 - 0.14 12.5 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2690) ArenaCapSnatch PF17296.2 ORF43726 - 0.033 13.6 0.1 0.036 13.5 0.1 1.0 1 0 0 1 1 1 0 Arenavirus cap snatching domain FerA PF08165.11 ORF43726 - 0.12 12.3 0.7 0.24 11.4 0.3 1.7 1 1 1 2 2 2 0 FerA (NUC095) domain XhlA PF10779.9 ORF43726 - 0.15 12.3 2.5 0.81 9.9 0.5 2.0 1 1 1 2 2 2 0 Haemolysin XhlA SBP_bac_3 PF00497.20 ORF43531 - 0.00024 20.6 0.3 0.00034 20.1 0.3 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 zf-ribbon_3 PF13248.6 ORF43505 - 0.029 13.8 0.5 0.19 11.2 0.4 2.1 2 0 0 2 2 2 0 zinc-ribbon domain TFIIB PF00382.19 ORF43389 - 0.0062 16.6 0.0 0.0083 16.2 0.0 1.2 1 0 0 1 1 1 1 Transcription factor TFIIB repeat bZIP_2 PF07716.15 ORF42959 - 1.6e-05 24.9 1.1 2.5e-05 24.3 1.1 1.3 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF42959 - 0.00044 20.3 0.6 0.00058 19.9 0.6 1.3 1 0 0 1 1 1 1 bZIP transcription factor ABC_tran_CTD PF16326.5 ORF42959 - 0.0057 16.9 2.6 0.0065 16.7 2.6 1.4 1 1 0 1 1 1 1 ABC transporter C-terminal domain DUF4354 PF14263.6 ORF42959 - 0.0095 15.7 0.1 0.011 15.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4354) FlxA PF14282.6 ORF42959 - 0.019 15.0 0.6 0.022 14.7 0.6 1.2 1 0 0 1 1 1 0 FlxA-like protein DUF2057 PF09829.9 ORF42959 - 0.043 14.0 0.2 0.048 13.8 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) BRI3BP PF14965.6 ORF42959 - 0.13 11.8 0.3 0.15 11.6 0.3 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 Paramyx_P_V_C PF03210.13 ORF42931 - 0.29 10.9 4.6 0.35 10.6 4.6 1.1 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal ZZ PF00569.17 ORF42908 - 0.042 13.7 3.1 0.045 13.6 1.8 1.7 1 1 1 2 2 2 0 Zinc finger, ZZ type Ribosomal_L9_C PF03948.14 ORF42317 - 0.12 12.8 0.0 0.27 11.7 0.0 1.5 1 1 0 1 1 1 0 Ribosomal protein L9, C-terminal domain Fer2_BFD PF04324.15 ORF41092 - 0.072 13.4 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 BFD-like [2Fe-2S] binding domain DUF2107 PF09880.9 ORF40905 - 0.13 12.4 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2107) zf-met PF12874.7 ORF40739 - 0.0051 17.2 1.8 0.01 16.2 1.8 1.6 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 ORF40739 - 0.015 15.8 2.3 0.015 15.8 2.3 1.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 ORF40739 - 0.03 14.3 2.1 0.043 13.8 2.1 1.2 1 0 0 1 1 1 0 C2H2-type zinc finger Cullin PF00888.22 ORF40678 - 1.8e-20 73.2 2.4 1.9e-20 73.1 2.4 1.0 1 0 0 1 1 1 1 Cullin family UPF0300 PF08594.10 ORF40091 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) CCB1 PF12046.8 ORF39850 - 0.061 12.7 0.1 0.061 12.7 0.1 1.1 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B FrpC PF06901.12 ORF39709 - 0.15 11.6 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 RTX iron-regulated protein FrpC Serum_albumin PF00273.20 ORF39652 - 0.016 15.0 0.1 0.016 15.0 0.1 1.1 1 0 0 1 1 1 0 Serum albumin family YacG PF03884.14 ORF39479 - 0.066 13.0 1.8 0.1 12.4 1.8 1.3 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG zf-Di19 PF05605.12 ORF39479 - 0.067 13.5 0.4 0.087 13.1 0.4 1.3 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf_C2H2_10 PF18414.1 ORF39479 - 0.17 11.5 2.1 0.29 10.7 1.4 1.9 1 1 0 1 1 1 0 C2H2 type zinc-finger Palm_thioest PF02089.15 ORF3933 - 3.6e-08 33.6 0.0 3.6e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase zf_C2HC_14 PF18574.1 ORF39020 - 0.00015 21.4 2.5 0.00047 19.9 0.6 2.3 2 0 0 2 2 2 1 C2HC Zing finger domain Sina PF03145.16 ORF39020 - 0.00083 19.4 4.1 0.00095 19.2 4.1 1.1 1 0 0 1 1 1 1 Seven in absentia protein family zf-TRAF_2 PF15965.5 ORF39020 - 0.024 15.1 4.6 0.025 15.0 4.6 1.1 1 0 0 1 1 1 0 TRAF-like zinc-finger zf-ACC PF17848.1 ORF39020 - 0.052 13.6 3.3 1.1 9.4 0.1 2.4 2 1 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain UPF0370 PF13980.6 ORF38173 - 2e-34 117.4 11.1 2.3e-34 117.2 11.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0370) NPA PF16469.5 ORF36589 - 0.031 14.8 1.3 0.034 14.7 1.3 1.1 1 0 0 1 1 1 0 Nematode polyprotein allergen ABA-1 SapB_1 PF05184.15 ORF36589 - 0.04 14.0 7.9 0.13 12.3 1.4 2.3 2 0 0 2 2 2 0 Saposin-like type B, region 1 DUF4845 PF16137.5 ORF36589 - 0.047 14.6 1.0 0.091 13.6 0.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4845) DUF3911 PF13050.6 ORF36589 - 0.052 13.7 1.7 0.069 13.3 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3911) MORN PF02493.20 ORF36451 - 1.1e-17 62.8 15.2 3.5e-06 26.6 1.1 3.3 3 0 0 3 3 3 3 MORN repeat DUF2610 PF11020.8 ORF36451 - 0.18 11.7 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) GRIP PF01465.20 ORF36 - 0.014 15.3 0.8 0.032 14.1 0.8 1.7 1 1 0 1 1 1 0 GRIP domain Cytochrom_C_asm PF01578.20 ORF35979 - 1.2e-13 51.4 2.9 1.2e-13 51.4 2.9 1.0 1 0 0 1 1 1 1 Cytochrome C assembly protein TPK_B1_binding PF04265.14 ORF35897 - 0.0045 16.7 0.0 0.0051 16.5 0.0 1.1 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, vitamin B1 binding domain Trimer_CC PF08954.11 ORF35821 - 0.023 14.2 1.7 0.13 11.8 1.7 1.9 1 1 0 1 1 1 0 Trimerisation motif TraE PF05309.11 ORF35674 - 0.88 8.9 6.0 1.1 8.6 6.0 1.0 1 0 0 1 1 1 0 TraE protein CM2 PF03021.14 ORF35636 - 0.042 13.7 0.5 0.047 13.5 0.5 1.2 1 0 0 1 1 1 0 Influenza C virus M2 protein NOA36 PF06524.12 ORF35564 - 0.023 14.0 8.0 0.023 14.0 8.0 1.1 1 0 0 1 1 1 0 NOA36 protein Keratin PF02422.16 ORF35564 - 0.047 13.4 1.3 0.058 13.1 1.3 1.2 1 0 0 1 1 1 0 Keratin TMEM247 PF15444.6 ORF35393 - 0.33 11.0 0.9 0.36 10.8 0.9 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 HCV_NS5a_1a PF08300.13 ORF34474 - 0.034 14.3 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a zinc finger domain Defensin_RK-1 PF17860.1 ORF33995 - 0.056 13.9 0.1 0.089 13.3 0.1 1.3 1 0 0 1 1 1 0 RK-1-like defensin YajC PF02699.15 ORF33881 - 1.6 8.6 9.6 5.3 7.0 2.7 2.1 2 0 0 2 2 2 0 Preprotein translocase subunit Histone_H2A_C PF16211.5 ORF33837 - 1.8 8.4 5.3 2.5 7.9 5.3 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A DUF3280 PF11684.8 ORF33075 - 0.081 13.3 0.2 0.089 13.2 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2380) BiPBP_C PF06832.12 ORF32978 - 0.12 12.4 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Penicillin-Binding Protein C-terminus Family PDEase_I_N PF08499.12 ORF32873 - 0.0055 16.5 0.0 0.0079 16.0 0.0 1.2 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase N-terminal PheRS_DBD2 PF18554.1 ORF32486 - 0.025 14.5 2.6 0.034 14.1 2.6 1.2 1 0 0 1 1 1 0 PheRS DNA binding domain 2 MORN PF02493.20 ORF30447 - 4.4e-10 38.8 6.3 2.5e-06 27.1 0.2 3.1 2 1 0 3 3 3 2 MORN repeat Phage_T4_Ndd PF06591.11 ORF29900 - 0.045 13.5 0.0 0.049 13.4 0.0 1.1 1 0 0 1 1 1 0 T4-like phage nuclear disruption protein (Ndd) PRIMA1 PF16101.5 ORF29492 - 0.29 11.2 1.6 0.3 11.1 1.6 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 COBRA PF04833.15 ORF29185 - 0.016 15.1 0.5 0.017 15.0 0.5 1.1 1 0 0 1 1 1 0 COBRA-like protein MFS_1 PF07690.16 ORF29144 - 2.5e-06 26.6 1.2 2.5e-06 26.6 1.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TrbE PF11100.8 ORF29144 - 0.018 15.2 0.2 0.032 14.4 0.2 1.4 1 0 0 1 1 1 0 Conjugal transfer protein TrbE Methyltransf_3 PF01596.17 ORF29144 - 0.13 11.4 0.2 0.13 11.4 0.2 1.1 1 0 0 1 1 1 0 O-methyltransferase Alba PF01918.21 ORF2906 - 0.13 12.1 0.4 0.2 11.5 0.4 1.3 1 0 0 1 1 1 0 Alba Histone PF00125.24 ORF28716 - 1.9e-08 34.7 0.4 2.4e-08 34.4 0.4 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 ImcF-related_N PF14331.6 ORF28716 - 0.027 13.8 0.1 0.031 13.6 0.1 1.1 1 0 0 1 1 1 0 ImcF-related N-terminal domain CBFD_NFYB_HMF PF00808.23 ORF28716 - 0.046 14.0 0.1 0.075 13.3 0.1 1.4 1 0 0 1 1 1 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID_20kDa PF03847.13 ORF28716 - 0.15 12.6 0.1 0.2 12.2 0.1 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A TOM20_plant PF06552.12 ORF28592 - 0.076 12.8 0.1 0.082 12.6 0.1 1.1 1 0 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 LRR19-TM PF15176.6 ORF27320 - 0.022 14.7 0.0 0.023 14.7 0.0 1.2 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Orf78 PF06024.12 ORF26793 - 0.4 11.0 4.1 0.45 10.8 4.1 1.1 1 0 0 1 1 1 0 Orf78 (ac78) DUF1378 PF07125.11 ORF26793 - 1.3 9.2 3.8 2 8.6 3.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1378) Flu_M2 PF00599.17 ORF26756 - 0.1 12.7 0.5 0.11 12.6 0.5 1.2 1 0 0 1 1 1 0 Influenza Matrix protein (M2) ERGIC_N PF13850.6 ORF26446 - 0.0099 16.2 0.2 0.01 16.2 0.2 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Imm17 PF15562.6 ORF26446 - 0.019 14.8 0.3 0.03 14.2 0.3 1.4 1 0 0 1 1 1 0 Immunity protein 17 Orthoreo_P10 PF07204.11 ORF26205 - 0.091 12.7 0.2 0.097 12.6 0.2 1.1 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 Anoctamin PF04547.12 ORF25834 - 0.015 14.1 2.6 0.015 14.1 2.6 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel Doppel PF11466.8 ORF25153 - 0.055 13.1 3.4 0.1 12.3 3.4 1.5 1 0 0 1 1 1 0 Prion-like protein Doppel Acid_PPase PF12689.7 ORF2473 - 0.086 12.7 0.0 0.086 12.7 0.0 1.0 1 0 0 1 1 1 0 Acid Phosphatase Pkinase PF00069.25 ORF24685 - 0.00013 21.4 0.0 0.00013 21.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Anemone_cytotox PF06369.12 ORF24556 - 0.085 12.5 0.0 0.098 12.3 0.0 1.1 1 0 0 1 1 1 0 Sea anemone cytotoxic protein Hpre_diP_synt_I PF07456.11 ORF24310 - 0.065 13.2 0.2 0.065 13.2 0.2 1.0 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase component I zf-BED PF02892.15 ORF24219 - 0.53 10.4 6.7 1.2 9.3 6.7 1.5 1 1 0 1 1 1 0 BED zinc finger GBP_PSP PF02425.15 ORF23527 - 0.064 12.9 0.2 0.064 12.9 0.2 1.9 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide KH_1 PF00013.29 ORF23375 - 0.14 12.0 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 KH domain Doppel PF11466.8 ORF23348 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel Baculo_p24 PF05073.12 ORF22767 - 0.058 13.2 1.8 0.077 12.8 1.8 1.2 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Shisa PF13908.6 ORF22153 - 0.006 16.9 1.9 0.0065 16.7 1.9 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Synaptobrevin PF00957.21 ORF22153 - 0.02 14.7 1.0 0.024 14.4 1.0 1.1 1 0 0 1 1 1 0 Synaptobrevin Orf78 PF06024.12 ORF22153 - 0.042 14.1 0.3 0.051 13.9 0.3 1.1 1 0 0 1 1 1 0 Orf78 (ac78) UCR_TM PF02921.14 ORF22153 - 0.1 13.1 1.1 0.14 12.7 1.1 1.2 1 0 0 1 1 1 0 Ubiquinol cytochrome reductase transmembrane region Tmemb_cc2 PF10267.9 ORF22153 - 0.11 11.7 1.9 0.12 11.5 1.9 1.0 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein DUF3827 PF12877.7 ORF22153 - 0.21 10.0 2.0 0.21 9.9 2.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) PRIMA1 PF16101.5 ORF22153 - 0.27 11.3 5.0 0.32 11.0 5.0 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 LRR19-TM PF15176.6 ORF22153 - 0.69 9.9 3.1 0.81 9.7 3.1 1.1 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain PilP PF04351.13 ORF21801 - 0.067 13.2 0.0 0.073 13.0 0.0 1.1 1 0 0 1 1 1 0 Pilus assembly protein, PilP DUF104 PF01954.16 ORF20905 - 0.072 13.5 0.0 0.097 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF104 RTX PF02382.15 ORF20773 - 0.0031 17.3 0.8 0.0032 17.2 0.8 1.1 1 0 0 1 1 1 1 N-terminal domain in RTX protein TcdA_TcdB_pore PF12920.7 ORF20773 - 0.065 11.5 1.0 0.069 11.4 1.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain Phage_holin_2_3 PF16080.5 ORF20773 - 0.13 12.0 5.6 0.24 11.2 5.5 1.6 1 1 0 1 1 1 0 Bacteriophage holin family HP1 Caveolin PF01146.17 ORF20773 - 0.46 10.4 2.0 0.51 10.3 1.9 1.3 1 1 0 1 1 1 0 Caveolin LapA_dom PF06305.11 ORF20773 - 9.4 6.1 8.4 9.8 6.1 1.0 2.2 1 1 1 2 2 2 0 Lipopolysaccharide assembly protein A domain Anoctamin PF04547.12 ORF20089 - 0.015 14.1 2.6 0.015 14.1 2.6 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel RAI1 PF08652.11 ORF19902 - 0.11 12.7 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 RAI1 like PD-(D/E)XK nuclease Anoctamin PF04547.12 ORF19178 - 0.015 14.1 2.6 0.015 14.1 2.6 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel DUF4186 PF13811.6 ORF19010 - 0.48 10.5 4.2 0.51 10.4 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) Herpes_UL52 PF03121.15 ORF18867 - 0.05 13.5 0.2 0.059 13.3 0.2 1.1 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase Toxin_20 PF08089.11 ORF17590 - 0.079 13.1 0.2 0.12 12.5 0.2 1.3 1 0 0 1 1 1 0 Huwentoxin-II family UPF0300 PF08594.10 ORF16631 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) Ntox37 PF15535.6 ORF16500 - 0.063 13.7 0.0 0.077 13.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 37 Toxin_21 PF08091.11 ORF16398 - 0.038 13.9 6.1 0.2 11.6 0.4 2.2 2 1 0 2 2 2 0 Spider insecticidal peptide AAA_19 PF13245.6 ORF16352 - 0.0048 17.2 0.0 0.0048 17.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF16352 - 0.02 14.6 0.1 0.022 14.5 0.1 1.0 1 0 0 1 1 1 0 AAA domain UvrD-helicase PF00580.21 ORF16352 - 0.023 14.3 0.4 0.026 14.0 0.4 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain MukF_C PF17193.4 ORF16352 - 0.037 14.2 0.3 0.038 14.1 0.3 1.1 1 0 0 1 1 1 0 MukF C-terminal domain DUF3384 PF11864.8 ORF16243 - 0.25 10.2 2.2 0.28 10.0 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3384) HECT PF00632.25 ORF15979 - 0.083 12.4 0.1 0.086 12.3 0.1 1.1 1 0 0 1 1 1 0 HECT-domain (ubiquitin-transferase) NES_C_h PF18208.1 ORF15521 - 0.025 14.8 0.8 0.032 14.5 0.8 1.1 1 0 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain HALZ PF02183.18 ORF15521 - 0.088 13.0 0.2 0.18 12.1 0.2 1.5 1 0 0 1 1 1 0 Homeobox associated leucine zipper TMEM156 PF15106.6 ORF14960 - 0.21 11.0 1.1 0.21 11.0 1.1 1.1 1 0 0 1 1 1 0 TMEM156 protein family Tetraspanin PF00335.20 ORF14960 - 0.61 9.7 10.0 0.62 9.7 10.0 1.0 1 0 0 1 1 1 0 Tetraspanin family ECSCR PF15820.5 ORF14960 - 1.9 8.3 5.8 1.5 8.6 5.1 1.3 1 1 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Ribosomal_L9_C PF03948.14 ORF14618 - 0.12 12.8 0.0 0.27 11.7 0.0 1.5 1 1 0 1 1 1 0 Ribosomal protein L9, C-terminal domain DUF4607 PF15380.6 ORF14472 - 0.0056 16.2 0.0 0.0061 16.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4607) SMP_LBD PF17047.5 ORF14074 - 0.0043 16.5 0.2 0.0046 16.4 0.2 1.0 1 0 0 1 1 1 1 Synaptotagmin-like mitochondrial-lipid-binding domain DUF2735 PF10931.8 ORF14006 - 0.0075 16.9 0.0 0.011 16.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2735) Leptin PF02024.15 ORF13997 - 0.016 15.0 0.0 0.016 15.0 0.0 1.1 1 0 0 1 1 1 0 Leptin Doppel PF11466.8 ORF13922 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel PAN_3 PF08277.12 ORF13519 - 0.042 13.6 0.2 0.05 13.4 0.2 1.3 1 0 0 1 1 1 0 PAN-like domain DUF4924 PF16271.5 ORF13475 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4924) Glyco_hydro_88 PF07470.13 ORF13256 - 0.24 10.5 0.4 0.23 10.5 0.4 1.0 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 DUF4096 PF13340.6 ORF12843 - 0.13 12.5 0.1 0.15 12.3 0.1 1.1 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) DUF1204 PF06721.11 ORF12819 - 0.06 12.8 0.3 0.066 12.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1204) TMEM238 PF15125.6 ORF12723 - 0.017 15.3 4.1 0.021 15.0 4.1 1.2 1 0 0 1 1 1 0 TMEM238 protein family DUF2017 PF09438.10 ORF12700 - 0.13 12.1 0.7 0.12 12.3 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2017) ThiS PF02597.20 ORF11888 - 2.1e-17 63.5 0.1 2.2e-17 63.4 0.1 1.0 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 ORF11888 - 0.018 15.1 0.0 0.26 11.4 0.0 2.1 2 0 0 2 2 2 0 ThiS-like ubiquitin Codanin-1_C PF15296.6 ORF11698 - 0.039 14.0 0.3 0.042 13.9 0.3 1.0 1 0 0 1 1 1 0 Codanin-1 C-terminus DUF2457 PF10446.9 ORF11273 - 6.1 5.9 6.0 6.2 5.9 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Fe_hyd_SSU PF02256.17 ORF112148 - 0.038 14.0 0.5 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Iron hydrogenase small subunit Doppel PF11466.8 ORF112109 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel DUF3008 PF11450.8 ORF11151 - 0.1 12.8 0.2 0.14 12.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknwon function (DUF3008) DUF1367 PF07105.11 ORF11130 - 0.1 12.3 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1367) Chordopox_L2 PF05803.12 ORF110773 - 0.04 13.8 3.9 0.049 13.5 3.9 1.3 1 0 0 1 1 1 0 Chordopoxvirus L2 protein DUF2527 PF10736.9 ORF110695 - 0.032 14.1 1.7 0.077 12.8 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) HTH_29 PF13551.6 ORF110695 - 0.056 13.5 0.1 0.071 13.1 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn helix RCC1_2 PF13540.6 ORF110677 - 0.00034 20.3 0.0 0.18 11.6 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF110677 - 0.046 13.8 0.2 0.53 10.3 0.0 1.9 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 DUF359 PF04019.12 ORF110677 - 0.059 13.0 0.0 2.5 7.8 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF359) TAXi_N PF14543.6 ORF109859 - 0.036 14.3 3.0 0.038 14.2 3.0 1.0 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal zf-dskA_traR PF01258.17 ORF109859 - 0.081 12.9 2.2 0.13 12.2 0.2 2.1 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger LMWPc PF01451.21 ORF109402 - 8.8e-15 55.3 0.0 9.8e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase DUF2770 PF10968.8 ORF109135 - 0.081 12.9 2.8 0.11 12.5 2.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2770) Type_III_YscX PF09474.10 ORF108860 - 0.11 12.8 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Type III secretion system YscX (type_III_YscX) Tad PF13400.6 ORF108666 - 0.026 14.8 1.4 0.026 14.8 1.4 1.1 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like Doppel PF11466.8 ORF108432 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel Histone_H2A_C PF16211.5 ORF108422 - 1.8 8.4 5.3 2.5 7.9 5.3 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A RDD PF06271.12 ORF107989 - 0.0099 16.1 0.3 0.01 16.0 0.3 1.0 1 0 0 1 1 1 1 RDD family DUF839 PF05787.13 ORF107863 - 0.00023 20.4 0.1 0.00025 20.3 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF839) UCH PF00443.29 ORF107509 - 3.1e-14 53.1 0.2 3.6e-14 52.9 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF107509 - 0.013 15.1 0.0 0.017 14.7 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase DUF411 PF04214.13 ORF106732 - 0.091 12.7 0.2 0.11 12.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF UPF0300 PF08594.10 ORF106151 - 0.039 13.2 0.1 0.042 13.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) HSA PF07529.13 ORF105638 - 0.026 14.8 0.5 0.031 14.6 0.5 1.1 1 0 0 1 1 1 0 HSA IZUMO PF15005.6 ORF10553 - 0.11 13.0 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DUF4295 PF14128.6 ORF105222 - 0.26 11.1 0.0 0.38 10.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4295) zf-C2HE PF16278.5 ORF105200 - 7.5e-08 32.7 3.5 9.4e-08 32.4 3.5 1.2 1 0 0 1 1 1 1 C2HE / C2H2 / C2HC zinc-binding finger MerT PF02411.15 ORF104706 - 0.014 15.4 0.1 0.016 15.2 0.1 1.0 1 0 0 1 1 1 0 MerT mercuric transport protein DUF1515 PF07439.11 ORF104631 - 0.022 14.8 0.3 0.026 14.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) DUF2284 PF10050.9 ORF103979 - 0.049 13.4 4.0 0.054 13.2 4.0 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) DUF3483 PF11982.8 ORF103808 - 0.037 13.7 0.1 0.043 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3483) TraE PF05309.11 ORF103650 - 0.88 8.9 6.0 1.1 8.6 6.0 1.0 1 0 0 1 1 1 0 TraE protein PTPA PF03095.15 ORF103302 - 0.0051 16.3 0.9 0.0055 16.2 0.9 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein DicB PF05358.11 ORF103302 - 0.096 12.8 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 DicB protein ApoB100_C PF12491.8 ORF102759 - 0.0095 15.9 0.5 0.017 15.1 0.5 1.5 1 0 0 1 1 1 1 Apolipoprotein B100 C terminal DUF682 PF05081.12 ORF102757 - 0.0099 15.6 0.1 0.011 15.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF682) GRDP-like PF07173.12 ORF102757 - 0.046 14.4 0.0 0.065 13.9 0.0 1.3 1 0 0 1 1 1 0 Glycine-rich domain-containing protein-like Med3 PF11593.8 ORF10212 - 0.15 11.3 0.0 0.16 11.1 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Bac_GDH PF05088.12 ORF101506 - 0.13 9.7 0.0 0.14 9.6 0.0 1.0 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase DUF1687 PF07955.11 ORF100884 - 0.078 13.4 0.4 0.083 13.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1687) KH_10 PF17905.1 ORF100527 - 0.08 13.4 0.2 0.097 13.1 0.2 1.1 1 0 0 1 1 1 0 GLD-3 KH domain 5 DUF2269 PF10027.9 ORF100025 - 0.013 15.6 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2269) DUF1455 PF07306.11 NODE_82427_length_193_cov_0.873418_g74486_i0reverse_frame_1 - 0.002 18.1 0.0 0.0022 17.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1455) DUF4027 PF13219.6 NODE_82427_length_193_cov_0.873418_g74486_i0reverse_frame_1 - 0.22 11.4 1.2 0.32 10.9 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4027) Filamin PF00630.19 NODE_82426_length_193_cov_0.917722_g74485_i0reverse_frame_1 - 0.058 14.2 0.0 0.063 14.1 0.0 1.1 1 0 0 1 1 1 0 Filamin/ABP280 repeat H2TH PF06831.14 NODE_82420_length_193_cov_0.974684_g74479_i0forward_frame_1 - 0.055 13.5 0.0 0.063 13.3 0.0 1.1 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain DUF1157 PF06636.11 NODE_82420_length_193_cov_0.974684_g74479_i0forward_frame_1 - 0.084 11.7 0.0 0.099 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1157) DUF4648 PF15505.6 NODE_82416_length_193_cov_0.993671_g74475_i0forward_frame_1 - 0.039 14.8 0.0 0.048 14.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4648) Ank_2 PF12796.7 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_1 - 0.00085 19.9 0.0 0.00098 19.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_1 - 0.0015 19.1 0.0 0.002 18.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_1 - 0.052 14.0 0.1 0.49 10.9 0.1 2.0 2 0 0 2 2 2 0 Ankyrin repeat Ank_5 PF13857.6 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_1 - 0.11 12.9 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (many copies) PCSK9_C1 PF18459.1 NODE_82409_length_193_cov_1.000000_g74468_i0reverse_frame_1 - 0.17 12.0 0.4 0.29 11.3 0.2 1.5 1 1 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain GlyL_C PF12524.8 NODE_82406_length_193_cov_1.000000_g74465_i0forward_frame_1 - 0.0034 17.5 0.4 0.0047 17.0 0.4 1.3 1 1 0 1 1 1 1 dsDNA virus glycoprotein L C terminal DUF4349 PF14257.6 NODE_82403_length_193_cov_1.006329_g74462_i0reverse_frame_1 - 0.077 12.4 2.4 0.07 12.6 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Shisa PF13908.6 NODE_82403_length_193_cov_1.006329_g74462_i0reverse_frame_1 - 0.64 10.2 4.1 0.57 10.4 4.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator UPF0258 PF06789.12 NODE_82403_length_193_cov_1.006329_g74462_i0reverse_frame_1 - 8 6.6 8.2 9.5 6.3 8.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0258) Pex24p PF06398.11 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_1 - 4.9 6.0 7.6 5 6.0 7.6 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2101 PF09874.9 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_1 - 5.8 6.6 7.0 5.7 6.6 7.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Ac81 PF05820.11 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_1 - 8 6.0 9.1 8.5 5.9 9.1 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 DUF2028 PF09667.10 NODE_82396_length_193_cov_1.006329_g74455_i0reverse_frame_1 - 0.039 13.9 0.5 0.041 13.8 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2028) NYAP_C PF15452.6 NODE_82390_length_193_cov_1.012658_g74449_i0reverse_frame_1 - 0.0026 17.7 1.1 0.0031 17.4 1.1 1.1 1 0 0 1 1 1 1 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter NT5C PF06941.12 NODE_82375_length_193_cov_1.012658_g74434_i0forward_frame_1 - 0.19 11.6 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) PH_18 PF18469.1 NODE_82374_length_193_cov_1.012658_g74433_i0reverse_frame_1 - 0.003 17.6 0.3 0.003 17.6 0.3 1.1 1 0 0 1 1 1 1 Pleckstrin homology domain Shisa PF13908.6 NODE_82372_length_193_cov_1.012658_g74431_i0forward_frame_1 - 0.043 14.1 0.2 0.043 14.1 0.2 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DYW_deaminase PF14432.6 NODE_82372_length_193_cov_1.012658_g74431_i0forward_frame_1 - 0.069 13.0 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 DYW family of nucleic acid deaminases Keratin_matx PF04579.12 NODE_82371_length_193_cov_1.012658_g74430_i0reverse_frame_1 - 0.011 16.0 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein UbiA PF01040.18 NODE_82369_length_193_cov_1.012658_g74428_i0reverse_frame_1 - 7e-09 35.3 0.7 7.6e-09 35.2 0.7 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family HPP PF04982.13 NODE_82369_length_193_cov_1.012658_g74428_i0reverse_frame_1 - 0.046 13.9 0.8 0.073 13.2 0.4 1.5 1 1 1 2 2 2 0 HPP family FeoB_C PF07664.12 NODE_82369_length_193_cov_1.012658_g74428_i0reverse_frame_1 - 0.14 11.9 1.6 0.24 11.1 0.1 1.8 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus DUF4018 PF13210.6 NODE_82367_length_193_cov_1.012658_g74426_i0forward_frame_1 - 0.023 14.5 3.8 0.025 14.4 3.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) zf-C6H2 PF15801.5 NODE_82358_length_193_cov_1.012658_g74417_i0reverse_frame_1 - 0.015 15.6 2.9 0.02 15.2 2.9 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding DUF5009 PF16401.5 NODE_82358_length_193_cov_1.012658_g74417_i0reverse_frame_1 - 0.044 13.3 0.6 0.045 13.2 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) DUF3699 PF12480.8 NODE_82354_length_193_cov_1.050633_g74413_i0reverse_frame_1 - 0.1 12.8 0.2 0.5 10.6 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3699) SR-25 PF10500.9 NODE_82349_length_193_cov_1.075949_g74408_i0forward_frame_1 - 0.18 11.4 11.0 0.2 11.2 11.0 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein MCCD1 PF15707.5 NODE_82349_length_193_cov_1.075949_g74408_i0forward_frame_1 - 0.63 10.5 3.9 0.8 10.2 3.9 1.2 1 0 0 1 1 1 0 Mitochondrial coiled-coil domain protein 1 DUF2921 PF11145.8 NODE_82337_length_193_cov_1.177215_g74396_i0reverse_frame_1 - 0.21 9.4 0.0 0.21 9.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2921) AMP_N PF05195.16 NODE_82322_length_193_cov_1.215190_g74381_i0forward_frame_1 - 0.13 12.0 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Aminopeptidase P, N-terminal domain Hanta_G2 PF01561.16 NODE_82319_length_193_cov_1.221519_g74378_i0reverse_frame_1 - 0.035 12.8 0.0 0.035 12.8 0.0 1.0 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 Phage_holin_2_1 PF04971.12 NODE_82313_length_193_cov_1.259494_g74372_i0forward_frame_1 - 0.025 14.6 0.1 0.042 13.9 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage P21 holin S # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks379.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks379.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks379.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks379.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:29:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_1 PF07690.16 ORF97843 - 3.9e-17 62.2 20.1 4.7e-17 62.0 20.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily G-patch_2 PF12656.7 ORF97186 - 1.3e-15 57.2 0.0 3e-15 56.0 0.0 1.7 1 0 0 1 1 1 1 G-patch domain KOW PF00467.29 ORF97186 - 0.00084 19.2 2.9 0.03 14.3 0.4 2.7 2 0 0 2 2 2 2 KOW motif Glycolytic PF00274.19 ORF9692 - 2.1e-159 529.9 0.0 2.4e-159 529.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I AOX PF01786.17 ORF9486 - 2.6e-85 285.4 0.3 4.3e-85 284.7 0.3 1.3 1 0 0 1 1 1 1 Alternative oxidase EF-hand_1 PF00036.32 ORF9486 - 1.2e-14 52.7 1.8 1.6e-08 33.5 0.4 2.7 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF9486 - 5.2e-14 52.5 2.8 1.1e-13 51.4 2.8 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF9486 - 2.1e-11 42.8 2.7 0.00013 21.6 0.2 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF9486 - 1.5e-10 40.8 0.6 3.7e-10 39.5 0.6 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF9486 - 3.7e-10 38.8 5.4 2.5e-05 23.6 0.1 3.1 3 0 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF9486 - 0.014 15.7 0.7 0.014 15.7 0.7 2.0 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF9486 - 0.034 14.1 0.5 0.076 13.0 0.5 1.6 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EFhand_Ca_insen PF08726.10 ORF9486 - 0.051 13.7 0.2 0.12 12.5 0.2 1.6 1 0 0 1 1 1 0 Ca2+ insensitive EF hand BKACE PF05853.12 ORF9486 - 0.058 12.7 0.0 0.076 12.3 0.0 1.2 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme PHD PF00628.29 ORF84684 - 0.0099 15.8 4.4 0.02 14.7 4.4 1.5 1 0 0 1 1 1 1 PHD-finger PHD_2 PF13831.6 ORF84684 - 0.02 14.4 2.2 0.048 13.2 2.2 1.6 1 0 0 1 1 1 0 PHD-finger DUF668 PF05003.12 ORF84684 - 0.44 11.0 3.8 13 6.3 0.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF668) DUF4407 PF14362.6 ORF84684 - 1 8.6 10.4 1.8 7.8 10.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-B_box PF00643.24 ORF84684 - 1.7 8.9 12.3 0.12 12.6 7.4 1.6 2 0 0 2 2 2 0 B-box zinc finger CAP PF00188.26 ORF82965 - 2.3e-07 31.7 2.1 2.1e-06 28.6 0.1 2.3 2 0 0 2 2 2 1 Cysteine-rich secretory protein family Abhydrolase_6 PF12697.7 ORF76718 - 2.1e-16 61.2 11.6 1.2e-15 58.7 11.6 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF76718 - 9.3e-16 58.2 0.1 2.7e-13 50.2 0.3 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF76718 - 0.00014 21.3 0.0 0.066 12.5 0.0 2.6 2 1 1 3 3 3 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF76718 - 0.013 15.0 0.0 0.29 10.6 0.0 2.3 2 0 0 2 2 2 0 Prolyl oligopeptidase family DLH PF01738.18 ORF76718 - 0.2 11.2 0.0 13 5.3 0.0 2.1 2 0 0 2 2 2 0 Dienelactone hydrolase family ECH_2 PF16113.5 ORF73134 - 3.2e-65 220.8 0.1 3.9e-65 220.5 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 ORF73134 - 2.2e-14 53.4 0.3 2.8e-14 53.0 0.3 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase CNTF PF01110.17 ORF73134 - 0.049 13.0 0.2 0.076 12.4 0.2 1.3 1 0 0 1 1 1 0 Ciliary neurotrophic factor PIN_9 PF18477.1 ORF73134 - 0.12 12.7 0.2 0.24 11.7 0.2 1.5 1 0 0 1 1 1 0 PIN like domain ORC_WH_C PF18137.1 ORF65593 - 0.14 12.2 0.2 7.8 6.6 0.0 2.4 1 1 1 2 2 2 0 Origin recognition complex winged helix C-terminal HlyD_3 PF13437.6 ORF63485 - 8e-18 65.1 2.3 6.2e-13 49.4 0.0 2.7 3 0 0 3 3 3 2 HlyD family secretion protein HlyD_D23 PF16576.5 ORF63485 - 5.9e-14 51.8 11.8 9.6e-12 44.6 11.8 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 ORF63485 - 1.1e-10 41.2 1.1 1.1e-10 41.2 1.1 2.6 2 1 0 2 2 2 1 Biotin-lipoyl like HlyD PF00529.20 ORF63485 - 8.3e-08 32.0 0.6 1.1e-07 31.6 0.6 1.1 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 ORF63485 - 0.00011 22.0 0.3 0.0038 17.0 0.1 2.6 2 0 0 2 2 2 1 Biotin-requiring enzyme Peptidase_M23 PF01551.22 ORF63485 - 0.016 15.4 0.0 0.11 12.8 0.0 2.2 2 0 0 2 2 2 0 Peptidase family M23 HlyD_2 PF12700.7 ORF63485 - 0.017 13.9 0.2 0.056 12.2 0.2 1.8 1 1 0 1 1 1 0 HlyD family secretion protein PTS_EIIA_1 PF00358.20 ORF63485 - 0.023 14.5 0.1 0.082 12.7 0.1 1.9 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CARD_2 PF16739.5 ORF63485 - 0.066 13.2 0.3 0.17 11.8 0.3 1.7 1 0 0 1 1 1 0 Caspase recruitment domain DUF2605 PF10792.9 ORF63485 - 0.92 9.5 9.8 0.38 10.7 3.1 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2605) FliJ PF02050.16 ORF63485 - 1.3 9.2 24.0 0.21 11.8 15.6 2.2 1 1 1 2 2 2 0 Flagellar FliJ protein DUF4407 PF14362.6 ORF63485 - 2 7.7 24.5 3.7 6.8 24.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) UPF0242 PF06785.11 ORF63485 - 7.3 6.6 9.5 11 6.0 9.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Spc7 PF08317.11 ORF63485 - 8.7 5.1 17.3 2.6 6.8 11.8 1.8 1 1 1 2 2 2 0 Spc7 kinetochore protein Sulfatase PF00884.23 ORF62572 - 0.057 12.8 0.0 0.083 12.3 0.0 1.2 1 0 0 1 1 1 0 Sulfatase Glucos_trans_II PF14264.6 ORF56454 - 0.0072 15.7 3.5 0.044 13.1 3.6 2.0 1 1 0 1 1 1 1 Glucosyl transferase GtrII Ion_trans PF00520.31 ORF56454 - 0.016 14.5 9.6 0.9 8.7 9.6 2.2 1 1 0 1 1 1 0 Ion transport protein Ank_2 PF12796.7 ORF54708 - 7.6e-16 58.5 3.7 0.00046 20.7 0.0 3.7 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF54708 - 8.4e-12 45.4 7.9 6.7e-05 23.4 0.1 5.5 4 1 2 6 6 6 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF54708 - 6.6e-10 38.4 6.3 0.0014 18.9 0.1 5.8 6 0 0 6 6 6 2 Ankyrin repeat Ank_5 PF13857.6 ORF54708 - 1.8e-09 37.7 6.9 0.0032 17.7 0.2 5.2 3 2 1 5 5 5 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF54708 - 2e-05 24.8 14.4 0.02 15.3 0.0 5.6 6 1 0 6 6 6 2 Ankyrin repeat TTC5_OB PF16669.5 ORF5410 - 3.6e-21 75.0 0.8 6.1e-21 74.3 0.8 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat protein 5 OB fold domain TPR_1 PF00515.28 ORF5410 - 1e-13 50.4 13.7 2.2e-05 24.1 0.2 5.8 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF5410 - 6.1e-12 44.7 15.3 3.2e-05 23.7 0.1 5.8 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF5410 - 5.9e-11 42.8 0.1 9.9e-05 22.9 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF5410 - 3.9e-09 36.0 10.2 0.039 14.2 0.1 5.8 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF5410 - 1.4e-08 34.9 2.1 0.0069 16.7 0.2 3.1 2 2 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF5410 - 5.5e-08 32.4 10.3 0.1 12.3 0.6 5.7 3 2 2 5 5 5 3 TPR repeat TPR_19 PF14559.6 ORF5410 - 5.2e-06 26.9 1.4 2.9e-05 24.5 0.4 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF5410 - 7.1e-05 22.9 6.3 0.26 11.8 0.2 4.3 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF5410 - 0.00048 19.9 1.0 0.18 11.7 0.1 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF5410 - 0.00096 19.3 0.0 0.11 12.7 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF5410 - 0.0012 18.8 0.4 0.075 13.1 0.0 3.3 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF5410 - 0.0045 17.7 0.7 2.6 9.1 0.0 4.1 3 2 2 5 5 4 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF5410 - 0.012 15.8 3.3 0.014 15.6 0.5 2.3 2 1 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 ORF5410 - 0.022 14.8 0.6 0.087 12.9 0.1 2.2 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat SHNi-TPR PF10516.9 ORF5410 - 0.024 14.1 1.4 3.1 7.3 0.3 3.1 3 0 0 3 3 3 0 SHNi-TPR TPR_6 PF13174.6 ORF5410 - 0.043 14.5 2.2 0.67 10.7 0.0 3.6 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_3 PF07720.12 ORF5410 - 0.072 13.1 0.6 0.21 11.6 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 ORF5410 - 0.84 9.7 6.1 31 4.7 0.4 4.1 3 2 0 3 3 3 0 MIT (microtubule interacting and transport) domain TauE PF01925.19 ORF51240 - 7.7e-14 51.9 5.5 1.2e-08 34.9 0.9 2.3 2 1 0 2 2 2 2 Sulfite exporter TauE/SafE DUF3493 PF11998.8 ORF51240 - 0.26 11.5 1.3 1.6 8.9 0.0 2.6 2 0 0 2 2 2 0 Low psii accumulation1 / Rep27 Ank_2 PF12796.7 ORF48141 - 3.6e-15 56.3 1.8 7.6e-05 23.2 0.0 4.1 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF48141 - 1.3e-12 47.9 4.3 4.4e-05 24.0 0.0 4.7 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF48141 - 1.8e-10 40.1 6.4 0.00072 19.8 0.0 6.1 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF48141 - 1.9e-07 31.2 4.9 0.014 15.8 0.0 5.1 5 0 0 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF48141 - 6.4e-07 29.5 10.0 0.019 15.3 0.1 5.2 4 2 2 6 6 6 2 Ankyrin repeats (many copies) EF-hand_7 PF13499.6 ORF27506 - 2e-21 76.2 6.8 1.1e-10 41.8 1.7 2.6 2 0 0 2 2 2 2 EF-hand domain pair Pkinase PF00069.25 ORF27506 - 1.3e-20 73.9 0.0 2.2e-20 73.1 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain EF-hand_1 PF00036.32 ORF27506 - 1.4e-17 61.8 4.1 1.4e-05 24.3 0.2 4.4 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF27506 - 1e-16 59.3 2.8 0.0089 15.9 0.1 4.5 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF27506 - 2.5e-14 52.9 5.9 5.8e-10 38.9 0.3 3.3 2 2 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF27506 - 2e-08 33.4 2.3 0.00081 18.8 0.1 3.7 3 0 0 3 3 3 2 EF hand Pkinase_Tyr PF07714.17 ORF27506 - 9.5e-07 28.4 0.0 1.8e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_9 PF14658.6 ORF27506 - 4.3e-05 23.8 0.3 0.11 12.8 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF27506 - 0.039 14.3 1.3 2.1 8.7 0.5 2.4 1 1 2 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region Aminotran_1_2 PF00155.21 ORF27506 - 0.063 12.4 0.0 0.088 12.0 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class I and II Adenine_glyco PF03352.13 ORF27506 - 0.067 13.0 0.2 13 5.6 0.1 2.3 2 0 0 2 2 2 0 Methyladenine glycosylase EF-hand_4 PF12763.7 ORF27506 - 0.075 13.0 1.1 1.2 9.1 0.1 2.4 1 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF27506 - 0.21 11.5 1.8 2.5 8.0 0.2 2.5 2 0 0 2 2 2 0 EF hand Rhodanese PF00581.20 ORF25809 - 9.1e-25 87.3 0.0 3e-13 50.2 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain G-patch_2 PF12656.7 ORF25617 - 1.3e-15 57.2 0.0 3e-15 56.0 0.0 1.7 1 0 0 1 1 1 1 G-patch domain KOW PF00467.29 ORF25617 - 0.00084 19.2 2.9 0.03 14.3 0.4 2.7 2 0 0 2 2 2 2 KOW motif SBP_bac_3 PF00497.20 ORF2403 - 3.4e-12 46.3 0.0 1.1e-11 44.6 0.0 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 AATF-Che1 PF13339.6 ORF21068 - 3.5 8.3 11.5 0.14 12.9 1.4 2.6 2 1 0 2 2 2 0 Apoptosis antagonizing transcription factor WD40 PF00400.32 ORF21007 - 1.7e-10 41.3 5.7 0.0017 19.1 0.0 6.8 6 1 1 7 7 7 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF21007 - 3.1e-05 24.2 0.3 0.004 17.4 0.1 3.5 2 2 2 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF1179 PF06678.11 ORF15562 - 0.044 13.8 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1179) Met_synt_B12 PF02965.17 ORF12681 - 6.3e-37 127.5 0.6 1.1e-36 126.7 0.0 1.7 2 0 0 2 2 2 1 Vitamin B12 dependent methionine synthase, activation domain B12-binding PF02310.19 ORF12681 - 2.9e-16 59.6 0.4 5.5e-16 58.7 0.3 1.5 1 1 0 1 1 1 1 B12 binding domain YtxH PF12732.7 ORF12681 - 0.032 14.8 1.0 0.67 10.5 0.1 2.6 2 0 0 2 2 2 0 YtxH-like protein LRR_3 PF07725.12 ORF100433 - 0.012 15.5 1.5 0.16 11.9 0.3 2.5 2 0 0 2 2 2 0 Leucine Rich Repeat DUF3944 PF13099.6 ORF100433 - 0.084 12.8 0.1 0.17 11.8 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3944) Med14 PF08638.11 ORF100433 - 0.5 9.8 8.8 0.92 8.9 8.8 1.5 1 0 0 1 1 1 0 Mediator complex subunit MED14 Fez1 PF06818.15 ORF100433 - 4.2 7.8 54.7 2.1 8.8 20.5 3.3 1 1 3 4 4 4 0 Fez1 IBN_N PF03810.19 NODE_17303_length_1064_cov_799.997085_g12620_i2forward_frame_2 - 0.017 15.0 0.2 0.042 13.8 0.2 1.6 1 0 0 1 1 1 0 Importin-beta N-terminal domain DUF1911 PF08929.10 NODE_17295_length_1065_cov_3.344660_g13177_i0forward_frame_3 - 0.004 17.9 0.2 0.083 13.7 0.1 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF1911) CemA PF03040.14 NODE_17295_length_1065_cov_3.344660_g13177_i0forward_frame_2 - 0.22 11.4 4.1 0.43 10.5 4.1 1.5 1 0 0 1 1 1 0 CemA family IBN_N PF03810.19 NODE_17275_length_1065_cov_804.104854_g12620_i1reverse_frame_3 - 0.018 14.9 0.2 0.042 13.8 0.2 1.6 1 0 0 1 1 1 0 Importin-beta N-terminal domain Glyco_hydro_38N PF01074.22 NODE_17275_length_1065_cov_804.104854_g12620_i1reverse_frame_2 - 9.2e-68 228.7 8.3 1.1e-67 228.5 8.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Polysacc_deac_1 PF01522.21 NODE_17275_length_1065_cov_804.104854_g12620_i1reverse_frame_2 - 0.00074 19.4 0.1 0.0011 18.9 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase dsrm PF00035.26 ORF93321 - 6e-12 46.1 0.1 6.3e-05 23.6 0.0 2.4 2 0 0 2 2 2 2 Double-stranded RNA binding motif Dicer_dimer PF03368.14 ORF93321 - 0.00074 19.6 0.2 0.88 9.8 0.0 2.4 2 0 0 2 2 2 2 Dicer dimerisation domain DND1_DSRM PF14709.7 ORF93321 - 0.067 13.4 0.1 3.2 8.1 0.0 2.4 2 0 0 2 2 2 0 double strand RNA binding domain from DEAD END PROTEIN 1 DUF1283 PF06932.11 ORF93321 - 3.8 7.8 12.2 0.21 11.8 0.3 2.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1283) Aa_trans PF01490.18 ORF92044 - 1.5e-35 122.7 2.9 2e-35 122.3 2.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Aa_trans PF01490.18 ORF86226 - 3e-25 88.8 23.3 3.5e-25 88.6 23.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF872 PF05915.12 ORF86226 - 5.1 7.3 8.5 14 5.9 0.1 3.4 3 0 0 3 3 3 0 Eukaryotic protein of unknown function (DUF872) Torus PF16131.5 ORF85150 - 1.7e-22 80.2 20.7 0.00011 22.9 1.3 5.3 4 1 1 5 5 5 5 Torus domain zf-CCCH PF00642.24 ORF85150 - 3.8e-22 77.7 39.1 6.7e-07 29.1 2.1 5.2 5 0 0 5 5 5 5 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF85150 - 6.2e-19 67.4 47.7 1.1e-05 25.2 3.5 5.2 5 0 0 5 5 5 5 Zinc finger domain zf-CCCH_4 PF18044.1 ORF85150 - 2.1e-12 46.5 37.9 2.7e-05 23.9 3.6 5.2 5 0 0 5 5 5 5 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF85150 - 3.9e-09 36.7 14.0 0.063 13.5 0.0 5.1 5 0 0 5 5 5 3 Zinc-finger containing family zf-CCCH_2 PF14608.6 ORF85150 - 6.4e-07 29.6 37.9 0.055 14.0 3.8 5.5 5 0 0 5 5 5 4 RNA-binding, Nab2-type zinc finger FAM176 PF14851.6 ORF85077 - 0.032 13.9 4.0 0.51 10.0 0.0 2.6 2 0 0 2 2 2 0 FAM176 family DUF4834 PF16118.5 ORF85077 - 0.25 12.3 11.2 9.7 7.2 0.2 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) Zip PF02535.22 ORF85077 - 0.27 10.4 3.4 1.4 8.1 0.0 2.2 2 1 0 2 2 2 0 ZIP Zinc transporter DUF4710 PF15828.5 ORF85077 - 3.5 7.8 8.7 5.4 7.2 7.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4710) ABC_tran PF00005.27 ORF83057 - 5.9e-29 101.3 0.2 9.2e-29 100.7 0.2 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF83057 - 2.2e-06 27.3 4.1 0.00013 21.5 3.9 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF83057 - 0.0017 18.4 1.0 0.011 15.7 0.1 2.3 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA PF00004.29 ORF83057 - 0.0024 18.3 1.1 0.98 9.9 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 ORF83057 - 0.004 17.1 2.6 0.0067 16.4 0.1 2.2 2 1 0 2 2 2 1 NTPase AAA_23 PF13476.6 ORF83057 - 0.011 16.2 1.7 0.031 14.8 1.8 1.5 1 1 0 1 1 1 0 AAA domain AAA_21 PF13304.6 ORF83057 - 0.017 15.0 0.1 5.6 6.7 0.0 2.2 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system DDRGK PF09756.9 ORF83057 - 0.021 14.4 0.4 0.042 13.4 0.4 1.6 1 0 0 1 1 1 0 DDRGK domain DUF87 PF01935.17 ORF83057 - 0.026 14.6 0.4 0.06 13.4 0.0 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain IstB_IS21 PF01695.17 ORF83057 - 0.043 13.5 0.2 1.9 8.2 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SSE PF00437.20 ORF83057 - 0.046 12.8 0.8 0.28 10.2 0.0 2.0 1 1 1 2 2 2 0 Type II/IV secretion system protein RNA_helicase PF00910.22 ORF83057 - 0.062 13.7 0.1 1.1 9.7 0.0 2.4 2 0 0 2 2 2 0 RNA helicase NB-ARC PF00931.22 ORF83057 - 0.068 12.3 1.8 0.25 10.5 1.8 1.8 1 1 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF83057 - 0.083 12.6 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 ORF83057 - 0.09 13.3 0.2 0.17 12.4 0.2 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF83057 - 0.11 12.8 0.6 0.48 10.7 0.6 2.0 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF83057 - 0.11 12.4 1.3 0.23 11.3 0.0 2.2 3 0 0 3 3 3 0 RsgA GTPase AAA_30 PF13604.6 ORF83057 - 0.16 11.6 0.0 0.54 10.0 0.0 1.7 1 1 0 1 1 1 0 AAA domain Oxidored_molyb PF00174.19 ORF80292 - 1.9e-31 109.0 0.0 2.8e-31 108.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 ORF80292 - 6.3e-19 68.4 0.1 1.2e-18 67.4 0.1 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain PhnI PF05861.12 ORF77638 - 7.2e-152 505.3 0.0 8.3e-152 505.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial phosphonate metabolism protein (PhnI) PhnG PF06754.12 ORF77638 - 7.2e-05 22.8 0.0 0.00013 21.9 0.0 1.5 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnG Aa_trans PF01490.18 ORF7202 - 5e-25 88.0 23.0 5.9e-25 87.8 23.0 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF872 PF05915.12 ORF7202 - 8.2 6.6 9.1 14 5.9 0.1 3.4 3 0 0 3 3 3 0 Eukaryotic protein of unknown function (DUF872) Ank_2 PF12796.7 ORF68324 - 1.3e-18 67.4 0.2 2.5e-08 34.4 0.2 4.1 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF68324 - 2.2e-15 56.8 1.4 3e-05 24.5 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF68324 - 3.6e-12 45.3 1.6 0.0013 19.0 0.0 6.0 6 0 0 6 6 6 2 Ankyrin repeat Ank_5 PF13857.6 ORF68324 - 2.8e-11 43.4 6.5 0.0018 18.6 0.1 5.5 5 1 1 6 6 6 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF68324 - 3.3e-09 36.8 2.6 0.008 16.6 0.0 5.3 5 0 0 5 5 5 3 Ankyrin repeat BPD_transp_1 PF00528.22 ORF57491 - 3.3e-26 92.1 16.2 3.3e-26 92.1 16.2 2.3 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component Pkinase_Tyr PF07714.17 ORF5371 - 2.9e-43 148.0 0.0 3.4e-43 147.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF5371 - 2.2e-40 138.7 0.0 3e-40 138.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 ORF5371 - 0.013 14.8 0.0 0.023 14.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF5371 - 0.018 14.4 0.0 0.032 13.6 0.0 1.3 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF5371 - 0.077 12.9 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family Meiosis_expr PF15163.6 ORF5371 - 0.12 13.1 0.1 0.24 12.1 0.1 1.5 1 0 0 1 1 1 0 Meiosis-expressed COesterase PF00135.28 ORF49650 - 7.6e-24 84.5 0.0 8.7e-24 84.3 0.0 1.0 1 0 0 1 1 1 1 Carboxylesterase family MgsA_C PF12002.8 ORF49650 - 0.048 13.6 0.1 0.098 12.6 0.1 1.4 1 0 0 1 1 1 0 MgsA AAA+ ATPase C terminal CS PF04969.16 ORF40709 - 3.5e-18 66.4 1.2 6.3e-18 65.6 1.2 1.4 1 0 0 1 1 1 1 CS domain Nudc_N PF14050.6 ORF40709 - 5e-18 64.8 0.5 9.8e-18 63.9 0.5 1.5 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. Cupin_4 PF08007.12 ORF39912 - 1.5e-07 31.2 0.0 2.2e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Cupin superfamily protein EF-hand_6 PF13405.6 ORF39912 - 0.00013 21.6 1.7 0.36 10.9 0.0 2.9 2 1 1 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF39912 - 0.00047 19.5 0.5 1.1 8.9 0.0 2.6 1 1 1 2 2 2 2 EF hand Cupin_8 PF13621.6 ORF39912 - 0.0023 17.7 0.0 0.19 11.4 0.0 2.4 2 1 0 2 2 2 1 Cupin-like domain EF-hand_8 PF13833.6 ORF39912 - 0.0023 17.7 0.1 0.63 9.9 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF39912 - 0.0029 17.0 1.3 2.7 7.7 0.3 2.7 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF39912 - 0.0081 16.6 0.3 0.53 10.8 0.3 2.4 1 1 0 1 1 1 1 EF-hand domain pair Dockerin_1 PF00404.18 ORF39912 - 0.069 13.4 1.0 7.3 6.9 1.0 2.3 1 1 1 2 2 2 0 Dockerin type I domain Ada_Zn_binding PF02805.16 ORF39864 - 2.1e-32 111.0 3.6 4.2e-32 110.0 3.6 1.5 1 0 0 1 1 1 1 Metal binding domain of Ada DNA_binding_1 PF01035.20 ORF39864 - 8.2e-32 109.2 3.2 1.3e-31 108.5 0.6 2.5 3 0 0 3 3 3 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 ORF39864 - 9.3e-22 77.6 0.0 1.6e-21 76.9 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HTH_AraC PF00165.23 ORF39864 - 4e-19 68.2 0.0 3.1e-11 43.1 0.0 2.6 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 ORF39864 - 1.2e-15 57.5 0.3 1.2e-15 57.5 0.3 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_15 PF12324.8 ORF39864 - 0.00034 20.5 0.5 9.7 6.2 0.0 3.4 2 1 1 3 3 3 3 Helix-turn-helix domain of alkylmercury lyase PAN_1 PF00024.26 ORF38323 - 1.1e-18 67.0 22.0 5.3e-07 29.5 2.7 3.2 3 0 0 3 3 3 3 PAN domain PAN_4 PF14295.6 ORF38323 - 8.5e-14 51.2 18.0 5.4e-06 26.2 1.8 3.5 3 0 0 3 3 3 3 PAN domain PAN_2 PF08276.11 ORF38323 - 0.0038 17.3 16.6 0.22 11.7 0.8 3.5 3 0 0 3 3 3 3 PAN-like domain MANEC PF07502.14 ORF38323 - 0.03 14.6 12.1 0.89 9.9 0.4 3.5 3 0 0 3 3 3 0 MANEC domain SCIFF PF13165.6 ORF38323 - 7.9 6.5 12.9 22 5.1 0.7 3.5 3 0 0 3 3 3 0 Six-cysteine peptide SCIFF PAN_3 PF08277.12 ORF38323 - 8.6 6.3 13.1 5.6 6.8 1.0 3.1 3 0 0 3 3 3 0 PAN-like domain URO-D PF01208.17 ORF34277 - 9.8e-143 475.5 0.0 1.1e-142 475.3 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) XPC-binding PF09280.11 ORF34277 - 0.097 12.4 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 XPC-binding domain COesterase PF00135.28 ORF34246 - 7.6e-24 84.5 0.0 8.7e-24 84.3 0.0 1.0 1 0 0 1 1 1 1 Carboxylesterase family MgsA_C PF12002.8 ORF34246 - 0.048 13.6 0.1 0.098 12.6 0.1 1.4 1 0 0 1 1 1 0 MgsA AAA+ ATPase C terminal Glyco_tranf_2_3 PF13641.6 ORF32280 - 0.0013 18.6 0.2 0.0022 17.9 0.2 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 ORF32280 - 0.0039 17.0 0.4 0.0079 16.0 0.4 1.8 1 1 0 1 1 1 1 Glycosyl transferase family 2 HAD_SAK_2 PF18143.1 ORF32280 - 0.015 15.6 2.3 0.017 15.4 1.1 1.7 2 0 0 2 2 2 0 HAD domain in Swiss Army Knife RNA repair proteins Tugs PF17840.1 ORF32280 - 0.052 13.7 0.1 0.27 11.5 0.1 2.2 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain CCB1 PF12046.8 ORF31673 - 0.11 11.8 2.2 1.7 7.9 0.0 2.9 3 1 0 3 3 3 0 Cofactor assembly of complex C subunit B PfkB PF00294.24 ORF30427 - 4.3e-35 121.5 0.0 3.6e-31 108.6 0.0 2.1 1 1 0 2 2 2 2 pfkB family carbohydrate kinase RRM_1 PF00076.22 ORF22099 - 3.4e-16 58.8 0.0 5.4e-16 58.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KH_1 PF00013.29 ORF22099 - 0.0044 16.8 0.1 0.0093 15.8 0.1 1.5 1 0 0 1 1 1 1 KH domain zf-CCCH PF00642.24 ORF22099 - 0.0058 16.5 1.3 0.0097 15.8 1.3 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Pentapeptide PF00805.22 ORF214 - 3.6e-37 125.6 42.2 2.6e-10 39.7 1.1 9.3 2 2 9 12 12 12 12 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF214 - 1.1e-33 115.2 14.4 2.2e-10 40.6 0.5 5.6 1 1 5 7 7 7 6 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF214 - 1.5e-17 63.5 13.6 0.0011 19.1 0.1 7.3 2 2 4 7 7 7 6 Pentapeptide repeats (9 copies) CfAFP PF05264.11 ORF214 - 7.5e-05 22.7 0.1 0.56 10.2 0.0 3.4 1 1 3 4 4 4 3 Choristoneura fumiferana antifreeze protein (CfAFP) Barttin PF15462.6 ORF21101 - 0.47 10.2 3.1 0.92 9.2 3.0 1.6 1 1 0 1 1 1 0 Bartter syndrome, infantile, with sensorineural deafness (Barttin) DUF2390 PF09523.10 ORF21101 - 3.9 7.8 8.3 0.33 11.3 0.6 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2390) DUF2760 PF10816.8 ORF18680 - 0.063 13.1 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2760) UQ_con PF00179.26 ORF16100 - 7.2e-15 54.9 0.2 2.2e-14 53.3 0.2 1.9 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF272 PF03312.15 ORF16100 - 2.4 8.4 10.0 0.96 9.7 1.0 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF272) Rod_C PF10493.9 ORF14236 - 0.12 10.8 0.2 0.17 10.2 0.2 1.2 1 0 0 1 1 1 0 Rough deal protein C-terminal region Nop52 PF05997.12 ORF12206 - 3.8e-38 131.4 0.2 6.3e-38 130.7 0.2 1.4 1 0 0 1 1 1 1 Nucleolar protein,Nop52 TERB2 PF15101.6 ORF12206 - 2.1 8.3 6.1 4 7.4 6.1 1.5 1 0 0 1 1 1 0 Telomere-associated protein TERB2 Glyco_transf_24 PF18404.1 ORF12135 - 3e-88 295.7 1.4 8.3e-86 287.7 1.4 2.0 1 1 0 1 1 1 1 Glucosyltransferase 24 Glyco_transf_8 PF01501.20 ORF12135 - 7.6e-09 35.5 0.0 1.3e-08 34.7 0.0 1.3 1 1 0 1 1 1 1 Glycosyl transferase family 8 FOLN PF09289.10 ORF12135 - 0.82 9.9 2.5 1.7 8.9 2.5 1.6 1 0 0 1 1 1 0 Follistatin/Osteonectin-like EGF domain Glyco_hydro_125 PF06824.11 ORF109358 - 2e-113 379.4 0.0 2.3e-113 379.2 0.0 1.0 1 0 0 1 1 1 1 Metal-independent alpha-mannosidase (GH125) DNA_ligase_IV PF11411.8 ORF109358 - 0.11 12.6 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 DNA ligase IV Aldo_ket_red PF00248.21 ORF107265 - 5e-56 190.1 0.0 5.8e-56 189.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family CD36 PF01130.21 ORF104751 - 3.4e-19 68.7 0.9 5e-19 68.2 0.9 1.2 1 0 0 1 1 1 1 CD36 family PorA PF11271.8 ORF104751 - 0.012 14.9 0.0 0.022 14.1 0.0 1.4 1 0 0 1 1 1 0 Porin PorA GATase_3 PF07685.14 ORF102313 - 0.22 11.1 0.0 0.37 10.4 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DHHC PF01529.20 ORF102247 - 2.7e-26 92.3 6.2 5.4e-26 91.3 6.2 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase PMG PF05287.12 NODE_17491_length_1058_cov_238.711632_g1699_i3forward_frame_1 - 0.052 13.6 2.9 2 8.4 0.8 2.2 1 1 1 2 2 2 0 PMG protein Lsr2 PF11774.8 NODE_17424_length_1060_cov_5.681951_g13282_i0reverse_frame_2 - 0.32 11.2 2.5 1.4 9.1 0.1 2.7 3 0 0 3 3 3 0 Lsr2 Pkinase PF00069.25 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 3.8e-19 69.1 5.4 5.5e-19 68.6 5.4 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 9.3e-07 28.0 0.0 1.5e-06 27.3 0.0 1.4 1 1 0 1 1 1 1 Fungal protein kinase Pkinase_Tyr PF07714.17 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 3.3e-06 26.6 0.2 5e-06 26.0 0.2 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 7.2e-06 25.8 0.5 0.00013 21.7 0.2 2.2 1 1 1 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 5.6e-05 22.6 0.1 0.0044 16.4 0.0 2.2 2 0 0 2 2 2 1 Kinase-like DUF3347 PF11827.8 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 0.0049 17.1 0.1 0.0091 16.2 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3347) Kdo PF06293.14 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 0.0054 16.1 0.2 0.024 14.0 0.2 1.9 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Omp28 PF11551.8 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 0.11 12.4 0.1 1.7 8.4 0.1 2.2 2 0 0 2 2 2 0 Outer membrane protein Omp28 DUF4909 PF16253.5 NODE_17376_length_1062_cov_3.730282_g13240_i0forward_frame_2 - 0.011 15.6 0.2 0.024 14.5 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4909) EpCAM_N PF18635.1 NODE_17375_length_1062_cov_64.111003_g13239_i0forward_frame_3 - 0.026 14.7 1.8 0.14 12.3 0.3 2.3 1 1 1 2 2 2 0 Epithelial cell adhesion molecule N-terminal domain DUF963 PF06131.11 NODE_17375_length_1062_cov_64.111003_g13239_i0forward_frame_3 - 8.1 6.0 11.5 3.3 7.2 1.7 2.3 2 0 0 2 2 2 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) MORN PF02493.20 ORF95868 - 1.2e-37 125.6 62.5 9.1e-07 28.4 1.7 10.9 10 2 0 10 10 10 9 MORN repeat NiFe-hyd_HybE PF11939.8 ORF9240 - 0.14 12.1 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 [NiFe]-hydrogenase assembly, chaperone, HybE Pkinase PF00069.25 ORF90096 - 4e-34 118.2 0.0 5.4e-34 117.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90096 - 2.1e-13 50.2 0.0 4.2e-13 49.2 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF90096 - 1e-08 34.4 0.0 2.3e-08 33.3 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF90096 - 0.0098 15.8 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF90096 - 0.022 14.4 0.0 0.033 13.8 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 ORF90096 - 0.024 14.0 0.0 0.038 13.4 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF90096 - 0.098 12.0 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 Kinase-like GFO_IDH_MocA PF01408.22 ORF8574 - 6.5e-14 52.8 0.0 1.1e-13 52.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold RCC1_2 PF13540.6 ORF69329 - 2.2e-14 52.8 20.7 0.3 11.0 0.1 8.2 8 0 0 8 8 8 6 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF69329 - 1.5e-05 25.2 3.3 16 5.6 0.0 6.4 6 1 0 6 6 6 1 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 ORF69329 - 4.6e-05 23.8 0.3 31 5.1 0.1 6.1 6 1 1 7 7 7 0 Spectrin repeat Cerato-platanin PF07249.12 ORF69329 - 0.00015 21.8 7.8 0.5 10.5 0.1 4.5 2 2 1 4 4 4 2 Cerato-platanin GST_C_2 PF13410.6 ORF69329 - 0.04 14.0 3.5 30 4.8 0.0 4.8 6 1 0 6 6 6 0 Glutathione S-transferase, C-terminal domain Methyltransf_29 PF03141.16 ORF69329 - 0.051 12.1 1.0 24 3.3 0.0 4.2 4 1 1 6 6 6 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Fez1 PF06818.15 ORF69329 - 3.3 8.1 5.8 80 3.6 0.0 4.5 5 0 0 5 5 5 0 Fez1 Choline_sulf_C PF12411.8 ORF69329 - 9 6.2 7.9 5.7 6.8 0.1 4.1 5 0 0 5 5 5 0 Choline sulfatase enzyme C terminal Rhodanese PF00581.20 ORF64941 - 0.0025 18.3 0.0 0.0065 17.0 0.0 1.8 1 1 0 1 1 1 1 Rhodanese-like domain Patatin PF01734.22 ORF61105 - 4.8e-23 82.4 0.0 1.5e-22 80.8 0.0 1.8 1 1 0 1 1 1 1 Patatin-like phospholipase Ldh_1_C PF02866.18 ORF58458 - 1.5e-43 148.6 0.1 4.5e-43 147.1 0.0 1.7 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 ORF58458 - 2.4e-33 115.2 0.1 3.4e-33 114.7 0.1 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain 3Beta_HSD PF01073.19 ORF58458 - 0.041 12.9 0.0 0.089 11.8 0.0 1.5 1 1 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family His_Phos_2 PF00328.22 ORF55381 - 1.6e-13 50.8 0.3 2e-13 50.4 0.3 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) p450 PF00067.22 ORF50372 - 1.7e-48 165.5 0.5 2.5e-48 165.0 0.5 1.2 1 0 0 1 1 1 1 Cytochrome P450 Sugar_tr PF00083.24 ORF50329 - 2.4e-32 112.4 5.2 2.8e-32 112.2 5.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF50329 - 7.8e-29 100.7 15.0 9.7e-29 100.4 15.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_4 PF06779.14 ORF50329 - 0.00066 19.1 1.5 0.0011 18.4 1.5 1.2 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB OATP PF03137.20 ORF50329 - 0.01 14.1 1.1 0.01 14.1 1.1 2.2 2 1 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family MFS_3 PF05977.13 ORF50329 - 0.036 12.5 1.3 0.05 12.0 1.3 1.1 1 0 0 1 1 1 0 Transmembrane secretion effector DUF4897 PF16238.5 ORF50329 - 0.15 11.9 1.9 1.4 8.7 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4897) MFS_1_like PF12832.7 ORF50329 - 0.46 9.3 17.1 0.011 14.6 6.8 2.2 2 0 0 2 2 2 0 MFS_1 like family DUF2721 PF11026.8 ORF50329 - 0.97 9.3 10.4 3.9 7.4 0.0 3.5 3 1 1 4 4 4 0 Protein of unknown function (DUF2721) MLANA PF14991.6 ORF4974 - 0.034 14.4 0.0 0.064 13.5 0.0 1.4 1 0 0 1 1 1 0 Protein melan-A Patatin PF01734.22 ORF47943 - 3.4e-19 69.8 0.7 6.7e-18 65.6 0.4 2.5 2 1 0 2 2 2 1 Patatin-like phospholipase HrpB7 PF09486.10 ORF47870 - 0.24 11.8 4.2 0.91 9.9 4.2 2.0 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) HTH_Tnp_Tc3_1 PF11427.8 ORF47870 - 2.1 8.3 4.7 4 7.4 0.1 3.3 3 0 0 3 3 3 0 Tc3 transposase DUF1664 PF07889.12 ORF47870 - 2.2 8.3 7.5 1.6 8.8 3.7 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Methyltransf_23 PF13489.6 ORF4340 - 0.0058 16.5 0.0 0.011 15.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain U-box PF04564.15 ORF42222 - 3.1e-09 36.9 0.5 1.6e-08 34.6 0.1 2.4 3 0 0 3 3 3 1 U-box domain Latarcin PF10279.9 ORF42222 - 0.0019 18.5 3.4 0.82 10.1 0.0 3.4 2 2 1 3 3 3 1 Latarcin precursor TraI_2_C PF07515.11 ORF42222 - 0.38 10.7 3.6 0.77 9.7 0.4 2.4 1 1 0 2 2 2 0 Putative conjugal transfer nickase/helicase TraI C-term Sas6_CC PF18594.1 ORF42222 - 3.5 7.5 9.6 3.2 7.6 0.2 3.4 3 1 0 3 3 3 0 Sas6/XLF/XRCC4 coiled-coil domain RsbU_N PF08673.10 ORF42222 - 4.1 7.6 6.8 0.42 10.7 0.3 2.8 3 0 0 3 3 3 0 Phosphoserine phosphatase RsbU, N-terminal domain HrpB7 PF09486.10 ORF41776 - 0.24 11.8 4.2 0.91 9.9 4.2 2.0 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) HTH_Tnp_Tc3_1 PF11427.8 ORF41776 - 2.1 8.3 4.7 4 7.4 0.1 3.3 3 0 0 3 3 3 0 Tc3 transposase DUF1664 PF07889.12 ORF41776 - 2.2 8.3 7.5 1.6 8.8 3.7 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DnaJ PF00226.31 ORF39455 - 5.4e-14 52.1 0.0 1.8e-13 50.4 0.0 1.9 2 0 0 2 2 2 1 DnaJ domain WW PF00397.26 ORF39455 - 0.00095 19.2 0.0 0.32 11.1 0.1 2.6 2 0 0 2 2 2 2 WW domain Patatin PF01734.22 ORF2269 - 1.7e-19 70.8 0.7 6.7e-18 65.6 0.4 2.7 2 1 0 2 2 2 1 Patatin-like phospholipase DivIC PF04977.15 ORF20818 - 0.0065 16.2 3.7 0.0065 16.2 3.7 4.8 2 1 1 4 4 4 1 Septum formation initiator FlaC_arch PF05377.11 ORF20818 - 0.015 15.6 5.4 0.015 15.6 5.4 3.2 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) V-SNARE_C PF12352.8 ORF20818 - 0.022 15.0 0.2 0.076 13.3 0.2 2.0 1 0 0 1 1 1 0 Snare region anchored in the vesicle membrane C-terminus YabA PF06156.13 ORF20818 - 0.023 15.3 4.3 0.023 15.3 4.3 3.7 2 1 1 3 3 3 0 Initiation control protein YabA FAM184 PF15665.5 ORF20818 - 0.2 11.4 41.3 0.3 10.8 41.3 1.2 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Methyltransf_23 PF13489.6 ORF1646 - 0.025 14.4 0.0 0.048 13.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 ORF1646 - 0.037 13.8 0.0 0.056 13.2 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_25 PF13649.6 ORF1646 - 0.043 14.5 0.0 0.11 13.2 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain DUF5096 PF17019.5 ORF1561 - 0.12 12.1 0.2 0.25 11.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5096) Methyltransf_23 PF13489.6 ORF13474 - 0.025 14.4 0.0 0.048 13.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 ORF13474 - 0.037 13.8 0.0 0.056 13.2 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_25 PF13649.6 ORF13474 - 0.043 14.5 0.0 0.11 13.2 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain PmbA_TldD PF01523.16 ORF111873 - 7e-54 183.6 0.1 1.5e-53 182.5 0.1 1.5 2 0 0 2 2 2 1 Putative modulator of DNA gyrase DUF4407 PF14362.6 ORF107419 - 0.0037 16.7 1.1 0.0037 16.7 1.1 2.2 1 1 1 2 2 2 1 Domain of unknown function (DUF4407) ATG16 PF08614.11 ORF107419 - 0.0073 16.6 35.5 0.13 12.5 4.3 3.1 2 1 1 3 3 3 2 Autophagy protein 16 (ATG16) PI3K_P85_iSH2 PF16454.5 ORF107419 - 0.069 12.7 21.0 0.51 9.9 17.9 2.9 2 1 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Flagellin_N PF00669.20 ORF107419 - 0.1 12.7 5.0 0.23 11.6 5.0 1.6 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region Sec16 PF12932.7 ORF107419 - 0.29 11.7 1.8 1.5 9.4 0.0 2.7 1 1 2 3 3 3 0 Vesicle coat trafficking protein Sec16 mid-region Fez1 PF06818.15 ORF107419 - 1.6 9.2 22.9 1.9 8.9 0.2 2.3 1 1 1 2 2 2 0 Fez1 DUF724 PF05266.14 ORF107419 - 2.4 8.0 21.1 0.23 11.3 5.7 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF724) CENP-F_leu_zip PF10473.9 ORF107419 - 3.2 7.8 36.4 1 9.4 20.0 3.1 2 1 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TPR_MLP1_2 PF07926.12 ORF107419 - 3.8 7.6 36.7 1.6 8.8 1.4 3.3 3 0 0 3 3 3 0 TPR/MLP1/MLP2-like protein CorA PF01544.18 ORF107419 - 5.1 6.3 12.6 8.3 5.6 11.1 1.9 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein ECH_1 PF00378.20 ORF107352 - 2.4e-32 112.2 0.1 3.1e-32 111.8 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF107352 - 5.8e-22 78.6 0.2 7.8e-22 78.2 0.2 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase FliT PF05400.13 ORF107352 - 0.03 15.1 0.0 5.7 7.8 0.0 2.6 3 0 0 3 3 3 0 Flagellar protein FliT CLP1_N PF16573.5 ORF107352 - 0.083 13.1 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 N-terminal beta-sandwich domain of polyadenylation factor Glu-tRNAGln PF02686.15 ORF107352 - 0.12 12.7 0.0 3.1 8.1 0.1 2.6 2 0 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit FF PF01846.19 ORF100247 - 1.3e-21 76.5 14.4 2e-08 34.3 0.0 4.6 4 0 0 4 4 4 4 FF domain FlbT PF07378.11 ORF100247 - 0.0023 18.0 1.6 0.005 16.9 0.2 2.1 2 0 0 2 2 2 1 Flagellar protein FlbT Epiglycanin_TR PF05647.11 NODE_17631_length_1054_cov_3.600589_g13426_i0forward_frame_1 - 2 8.4 8.6 0.17 11.8 2.8 2.2 3 0 0 3 3 3 0 Tandem-repeating region of mucin, epiglycanin-like Stimulus_sens_1 PF13756.6 NODE_17615_length_1054_cov_323.646712_g13414_i0reverse_frame_1 - 0.0032 18.0 0.2 0.0058 17.2 0.2 1.5 1 0 0 1 1 1 1 Stimulus-sensing domain CDT1 PF08839.11 NODE_17615_length_1054_cov_323.646712_g13414_i0reverse_frame_1 - 0.033 14.5 0.2 0.06 13.6 0.2 1.5 1 0 0 1 1 1 0 DNA replication factor CDT1 like DUF4834 PF16118.5 NODE_17615_length_1054_cov_323.646712_g13414_i0reverse_frame_1 - 9.3 7.3 12.6 0.31 12.0 1.1 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) Pepdidase_M14_N PF18027.1 NODE_17550_length_1056_cov_196.830558_g13368_i0reverse_frame_1 - 6.3 7.2 6.6 33 4.9 0.2 3.1 2 1 1 3 3 3 0 Cytosolic carboxypeptidase N-terminal domain Humanin PF15040.6 NODE_17550_length_1056_cov_196.830558_g13368_i0forward_frame_1 - 0.28 10.7 5.0 4.4 6.8 0.4 2.5 2 0 0 2 2 2 0 Humanin family SecA_SW PF07516.13 NODE_17531_length_1057_cov_82.198630_g13354_i0forward_frame_3 - 0.0011 19.1 7.5 0.0015 18.6 7.5 1.4 1 1 0 1 1 1 1 SecA Wing and Scaffold domain LPP PF04728.13 NODE_17531_length_1057_cov_82.198630_g13354_i0forward_frame_3 - 0.011 16.1 2.2 0.011 16.1 2.2 2.5 3 0 0 3 3 3 0 Lipoprotein leucine-zipper PHD PF00628.29 NODE_17531_length_1057_cov_82.198630_g13354_i0forward_frame_3 - 0.63 10.0 8.9 0.14 12.1 4.5 2.1 2 1 0 2 2 2 0 PHD-finger Exonuc_VII_L PF02601.15 NODE_17531_length_1057_cov_82.198630_g13354_i0forward_frame_3 - 1.4 8.4 8.5 2 7.9 8.5 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit zf-B_box PF00643.24 NODE_17531_length_1057_cov_82.198630_g13354_i0forward_frame_3 - 5.5 7.2 13.1 0.42 10.8 8.1 1.7 2 0 0 2 2 2 0 B-box zinc finger Pentapeptide_2 PF01469.18 NODE_17491_length_1058_cov_238.711632_g1699_i3forward_frame_3 - 0.17 11.8 15.6 0.22 11.5 4.7 2.7 1 1 1 2 2 2 0 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 NODE_17491_length_1058_cov_238.711632_g1699_i3forward_frame_3 - 2.5 8.3 9.8 1.2 9.3 6.6 2.0 1 1 1 2 2 2 0 Pentapeptide repeats (9 copies) RNA_pol_3_Rpc31 PF11705.8 NODE_17449_length_1059_cov_121.776367_g13299_i0forward_frame_3 - 0.71 10.1 7.0 0.22 11.8 4.0 1.6 1 1 1 2 2 2 0 DNA-directed RNA polymerase III subunit Rpc31 Exonuc_VII_L PF02601.15 NODE_17449_length_1059_cov_121.776367_g13299_i0forward_frame_2 - 0.077 12.6 3.7 0.1 12.1 3.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit TMEM247 PF15444.6 NODE_17446_length_1059_cov_143.116211_g13296_i0reverse_frame_2 - 5.8 6.9 6.2 15 5.6 6.2 1.7 1 0 0 1 1 1 0 Transmembrane protein 247 Sigma_reg_N PF13800.6 ORF97587 - 0.0049 17.1 0.1 0.019 15.3 0.0 2.0 2 0 0 2 2 2 1 Sigma factor regulator N-terminal TssO PF17561.2 ORF97587 - 0.013 15.6 0.2 0.034 14.2 0.2 1.7 1 0 0 1 1 1 0 Type VI secretion system, TssO TMEM51 PF15345.6 ORF97587 - 0.025 14.4 0.2 0.1 12.4 0.0 1.9 2 1 1 3 3 3 0 Transmembrane protein 51 Orthoreo_P10 PF07204.11 ORF97587 - 0.096 12.7 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DUF4834 PF16118.5 ORF97587 - 0.12 13.4 0.0 0.12 13.4 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) Holin_BlyA PF05102.12 ORF97587 - 0.27 11.2 2.5 0.49 10.4 2.5 1.4 1 0 0 1 1 1 0 holin, BlyA family He_PIG PF05345.12 ORF97587 - 6.3 7.1 21.4 0.1 12.8 6.8 3.6 1 1 2 3 3 3 0 Putative Ig domain PPR PF01535.20 ORF91864 - 1.5e-17 62.5 3.2 6.5e-06 26.0 0.0 6.1 7 0 0 7 7 7 3 PPR repeat PPR_2 PF13041.6 ORF91864 - 1.6e-15 57.0 3.2 1.7e-06 28.1 0.4 4.3 3 1 3 6 6 6 4 PPR repeat family PPR_3 PF13812.6 ORF91864 - 1.4e-10 41.1 0.0 0.00014 21.9 0.0 3.9 3 1 0 4 4 4 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF91864 - 2.9e-08 33.3 0.4 5.8e-05 22.7 0.0 3.2 3 0 0 3 3 3 2 PPR repeat PPR_long PF17177.4 ORF91864 - 0.0019 17.6 0.0 0.011 15.1 0.0 2.0 1 1 1 2 2 2 1 Pentacotripeptide-repeat region of PRORP JAB PF01398.21 ORF81315 - 2.2e-27 95.4 0.0 5.1e-27 94.2 0.0 1.7 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease CSN5_C PF18323.1 ORF81315 - 7.6e-09 36.4 0.6 1.9e-08 35.1 0.3 1.8 2 0 0 2 2 2 1 Cop9 signalosome subunit 5 C-terminal domain Prok-JAB PF14464.6 ORF81315 - 0.0074 16.1 0.0 0.017 14.9 0.0 1.6 1 1 0 1 1 1 1 Prokaryotic homologs of the JAB domain tRNA-synt_2 PF00152.20 ORF7309 - 7.9e-46 156.6 0.0 9.2e-46 156.4 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) GAD PF02938.14 ORF7309 - 1.7e-32 111.5 0.1 2.8e-32 110.8 0.1 1.4 1 0 0 1 1 1 1 GAD domain Leukocidin PF07968.12 ORF7309 - 0.17 11.7 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 Leukocidin/Hemolysin toxin family tRNA-synt_2d PF01409.20 ORF7309 - 0.17 11.3 0.0 0.33 10.4 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) Peptidase_C1 PF00112.23 ORF68361 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF68361 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF68361 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF68361 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein Peptidase_C1 PF00112.23 ORF64080 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF64080 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF64080 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF64080 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein DUF745 PF05335.13 ORF57427 - 0.099 12.4 0.1 0.099 12.4 0.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF745) ERO1 PF04137.15 ORF57001 - 0.07 12.3 0.0 0.099 11.8 0.0 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) CbiA PF01656.23 ORF54759 - 0.0022 18.1 0.0 0.0031 17.5 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 ORF54759 - 0.13 12.2 0.0 0.26 11.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain Cupin_8 PF13621.6 ORF50608 - 1e-15 58.1 1.9 4.8e-15 56.0 0.2 2.3 2 1 0 2 2 2 1 Cupin-like domain JmjC PF02373.22 ORF50608 - 0.00039 20.8 0.0 0.014 15.9 0.0 2.5 1 1 0 1 1 1 1 JmjC domain, hydroxylase Cupin_1 PF00190.22 ORF50608 - 0.021 14.4 0.0 0.03 13.9 0.0 1.3 1 0 0 1 1 1 0 Cupin Cupin_4 PF08007.12 ORF50608 - 0.074 12.5 0.0 0.16 11.4 0.0 1.5 1 0 0 1 1 1 0 Cupin superfamily protein Peptidase_C1 PF00112.23 ORF50136 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF50136 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF50136 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF50136 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein Mob_synth_C PF06463.13 ORF47843 - 2.4e-39 134.2 0.0 4.6e-39 133.3 0.0 1.5 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 ORF47843 - 7.6e-29 101.2 0.0 1e-28 100.8 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 ORF47843 - 2.1e-07 31.3 0.0 4e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 ORF47843 - 0.00037 20.6 0.0 0.00091 19.4 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF1272 PF06906.11 ORF47843 - 0.075 13.1 2.8 7.6 6.7 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) ATG16 PF08614.11 ORF43040 - 0.0016 18.7 23.5 0.0016 18.7 23.5 4.2 1 1 3 4 4 4 2 Autophagy protein 16 (ATG16) FPP PF05911.11 ORF43040 - 0.0046 15.2 40.3 0.012 13.8 40.3 1.6 1 1 0 1 1 1 1 Filament-like plant protein, long coiled-coil CENP-F_leu_zip PF10473.9 ORF43040 - 0.021 14.9 56.2 0.47 10.5 9.3 4.2 1 1 3 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Filament PF00038.21 ORF43040 - 0.13 11.8 48.1 0.58 9.7 7.8 4.0 1 1 2 3 3 2 0 Intermediate filament protein DUF4201 PF13870.6 ORF43040 - 0.18 11.6 48.2 0.96 9.2 2.6 4.2 2 1 2 4 4 4 0 Domain of unknown function (DUF4201) DUF724 PF05266.14 ORF43040 - 0.41 10.4 40.8 0.75 9.6 6.4 4.1 1 1 3 4 4 4 0 Protein of unknown function (DUF724) APG6_N PF17675.1 ORF43040 - 0.46 11.0 56.7 0.035 14.6 19.3 4.6 1 1 3 4 4 4 0 Apg6 coiled-coil region Fmp27_SW PF10305.9 ORF43040 - 0.95 10.2 6.5 1.4 9.7 1.9 3.1 2 1 0 3 3 3 0 RNA pol II promoter Fmp27 protein domain Prominin PF05478.11 ORF43040 - 1.2 7.0 25.4 0.49 8.3 19.9 2.2 1 1 1 2 2 2 0 Prominin AAA_13 PF13166.6 ORF43040 - 1.8 7.1 39.4 1.3 7.6 23.1 2.8 1 1 0 2 2 2 0 AAA domain TACC_C PF05010.14 ORF43040 - 3.7 7.3 43.2 25 4.6 12.6 4.0 1 1 2 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HemX PF04375.14 ORF43040 - 4.9 6.4 28.6 0.45 9.8 6.9 3.5 1 1 2 3 3 3 0 HemX, putative uroporphyrinogen-III C-methyltransferase HrpB2 PF09487.10 ORF43040 - 6.8 7.2 8.8 69 3.9 0.8 3.5 1 1 1 3 3 3 0 Bacterial type III secretion protein (HrpB2) DUF1843 PF08898.10 ORF43040 - 8.3 7.0 9.3 80 3.8 0.1 3.9 2 1 1 3 3 3 0 Domain of unknown function (DUF1843) DUF4250 PF14056.6 ORF43040 - 8.6 6.4 9.6 0.6 10.1 0.6 3.5 3 1 1 4 4 4 0 Domain of unknown function (DUF4250) EST1 PF10374.9 ORF43040 - 9.9 6.8 11.8 0.97 10.1 5.9 2.2 1 1 1 2 2 2 0 Telomerase activating protein Est1 Citrate_ly_lig PF08218.11 ORF38226 - 3.9e-84 280.9 0.0 7.8e-84 279.9 0.0 1.5 2 0 0 2 2 2 1 Citrate lyase ligase C-terminal domain HIGH_NTase1 PF05636.11 ORF38226 - 1.5e-05 24.4 0.2 0.037 13.2 0.0 2.2 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase Acetyltransf_10 PF13673.7 ORF38226 - 0.00075 19.4 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF38226 - 0.0038 17.4 0.0 0.016 15.4 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family FR47 PF08445.10 ORF38226 - 0.052 13.5 0.0 0.095 12.7 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein CENP-F_C_Rb_bdg PF10490.9 ORF38226 - 0.094 12.2 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 p450 PF00067.22 ORF37326 - 1.2e-62 212.2 0.0 1.5e-62 211.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Laminin_II PF06009.12 ORF35306 - 0.016 15.3 5.1 0.016 15.3 5.1 3.6 1 1 0 3 3 3 0 Laminin Domain II RF-1 PF00472.20 ORF35306 - 3.6 7.5 23.3 0.32 11.0 15.7 2.6 2 0 0 2 2 2 0 RF-1 domain CbiA PF01656.23 ORF33730 - 0.0022 18.1 0.0 0.0031 17.5 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 ORF33730 - 0.13 12.2 0.0 0.26 11.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF4027 PF13219.6 ORF30292 - 0.12 12.3 1.1 0.19 11.6 0.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4027) Cupin_8 PF13621.6 ORF26292 - 3.1e-21 76.3 0.0 5.7e-20 72.1 0.0 2.2 1 1 0 1 1 1 1 Cupin-like domain JmjC PF02373.22 ORF26292 - 6.4e-18 65.2 0.0 1.6e-17 64.0 0.0 1.7 2 0 0 2 2 2 1 JmjC domain, hydroxylase Cupin_4 PF08007.12 ORF26292 - 0.01 15.4 0.0 0.02 14.4 0.0 1.5 2 0 0 2 2 2 0 Cupin superfamily protein DUF285 PF03382.14 ORF22126 - 2.4e-62 208.1 24.4 8.1e-34 116.0 7.3 2.4 1 1 1 2 2 2 2 Mycoplasma protein of unknown function, DUF285 DUF2787 PF10980.8 ORF22126 - 0.14 12.3 0.1 7.2 6.8 0.0 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF2787) Peptidase_C1 PF00112.23 ORF21671 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF21671 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF21671 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF21671 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein PRT_C PF08372.10 ORF12451 - 0.0054 16.5 0.2 0.011 15.5 0.2 1.5 1 1 0 1 1 1 1 Plant phosphoribosyltransferase C-terminal FA_hydroxylase PF04116.13 ORF109650 - 4.6e-21 75.6 15.2 4.6e-21 75.6 15.2 2.3 2 2 1 3 3 3 1 Fatty acid hydroxylase superfamily Peptidase_C1 PF00112.23 ORF109240 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF109240 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF109240 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF109240 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein Aa_trans PF01490.18 ORF108763 - 1.2e-13 50.6 14.8 2.6e-13 49.5 14.8 1.5 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein DUF2304 PF10066.9 ORF108763 - 8.3 6.7 9.4 25 5.2 0.8 2.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) PPR_2 PF13041.6 ORF104830 - 8.4e-06 25.9 0.1 0.00074 19.7 0.0 3.3 2 1 1 3 3 3 1 PPR repeat family PPR_long PF17177.4 ORF104830 - 0.00075 18.9 0.1 0.0022 17.4 0.0 1.7 2 0 0 2 2 2 1 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 ORF104830 - 0.0076 16.3 0.0 0.061 13.4 0.0 2.4 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR PF01535.20 ORF104830 - 0.029 14.6 4.6 22 5.6 0.0 4.6 6 0 0 6 6 6 0 PPR repeat Aa_trans PF01490.18 ORF104345 - 4.2e-33 114.6 4.1 4.7e-33 114.5 4.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Cation_efflux PF01545.21 ORF104326 - 3.2e-43 147.8 6.7 4e-43 147.5 6.7 1.1 1 0 0 1 1 1 1 Cation efflux family 7TM_GPCR_Sra PF02117.16 ORF104326 - 0.11 11.2 0.2 6 5.6 0.0 2.1 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Sra FtsX PF02687.21 ORF104326 - 8.2 7.0 6.9 17 5.9 3.2 2.8 1 1 0 2 2 2 0 FtsX-like permease family Peptidase_C1 PF00112.23 ORF103256 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF103256 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF103256 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF103256 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein Asp PF00026.23 ORF100272 - 4.6e-25 88.7 0.0 2.2e-24 86.4 0.0 1.8 1 1 0 1 1 1 1 Eukaryotic aspartyl protease Vma12 PF11712.8 NODE_17680_length_1052_cov_369.000000_g12391_i1forward_frame_1 - 0.0062 16.6 1.5 0.0062 16.6 1.5 1.6 2 0 0 2 2 2 1 Endoplasmic reticulum-based factor for assembly of V-ATPase Molybdopterin PF00384.22 NODE_17634_length_1054_cov_2.659470_g13429_i0reverse_frame_3 - 2.9e-11 43.0 0.0 3.3e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase RVT_1 PF00078.27 NODE_17631_length_1054_cov_3.600589_g13426_i0forward_frame_3 - 6.9e-17 61.7 0.0 9.7e-17 61.2 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) SNO PF01174.19 NODE_17624_length_1054_cov_114.178606_g13420_i0forward_frame_3 - 0.072 12.9 0.1 0.25 11.2 0.1 1.8 2 0 0 2 2 2 0 SNO glutamine amidotransferase family PGA_cap PF09587.10 NODE_17615_length_1054_cov_323.646712_g13414_i0reverse_frame_3 - 0.098 12.1 0.9 0.1 12.0 0.0 1.4 2 0 0 2 2 2 0 Bacterial capsule synthesis protein PGA_cap TACC_C PF05010.14 NODE_17615_length_1054_cov_323.646712_g13414_i0reverse_frame_3 - 3.2 7.5 11.0 0.065 13.0 3.9 1.7 2 0 0 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF1295 PF06966.12 NODE_17605_length_1054_cov_865.695780_g12456_i1reverse_frame_2 - 9.3e-38 130.1 11.0 2.1e-19 70.0 2.4 3.1 2 1 0 2 2 2 2 Protein of unknown function (DUF1295) PEMT PF04191.13 NODE_17605_length_1054_cov_865.695780_g12456_i1reverse_frame_2 - 0.00029 21.2 1.4 0.0012 19.2 0.2 2.5 2 0 0 2 2 2 1 Phospholipid methyltransferase Steroid_dh PF02544.16 NODE_17605_length_1054_cov_865.695780_g12456_i1reverse_frame_2 - 0.00038 20.5 1.9 0.00038 20.5 1.9 2.4 2 2 1 3 3 3 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 NODE_17605_length_1054_cov_865.695780_g12456_i1reverse_frame_2 - 0.0024 18.3 0.8 0.0024 18.3 0.8 2.5 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF996 PF06195.13 NODE_17605_length_1054_cov_865.695780_g12456_i1reverse_frame_2 - 5 7.4 12.6 0.77 10.1 5.4 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF996) DUF5479 PF17575.2 NODE_17589_length_1055_cov_103.486275_g13398_i0reverse_frame_2 - 0.0038 17.7 0.0 0.011 16.2 0.0 1.8 1 0 0 1 1 1 1 Family of unknown function (DUF5479) zf-RING_11 PF17123.5 NODE_17589_length_1055_cov_103.486275_g13398_i0forward_frame_2 - 0.073 12.8 2.6 0.23 11.2 2.6 2.0 1 0 0 1 1 1 0 RING-like zinc finger RCC1_2 PF13540.6 NODE_17550_length_1056_cov_196.830558_g13368_i0forward_frame_3 - 5.1e-18 64.4 22.4 0.3 11.0 0.4 8.3 8 0 0 8 8 8 8 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_17550_length_1056_cov_196.830558_g13368_i0forward_frame_3 - 4.6e-08 33.4 4.9 12 5.9 0.0 7.6 6 1 1 7 7 7 2 Uncharacterised ACR, YagE family COG1723 Sec66 PF09802.9 NODE_17550_length_1056_cov_196.830558_g13368_i0forward_frame_3 - 0.033 13.8 0.0 53 3.3 0.0 3.7 4 0 0 4 4 4 0 Preprotein translocase subunit Sec66 Chloroa_b-bind PF00504.21 ORF96740 - 4e-42 144.5 0.4 1.5e-27 97.1 0.1 2.2 2 0 0 2 2 2 2 Chlorophyll A-B binding protein SpoIISA_toxin PF14171.6 ORF91377 - 0.26 10.9 13.6 0.3 10.8 0.9 2.3 2 1 0 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system MMPL PF03176.15 ORF91377 - 2.9 6.8 4.6 1.1 8.1 1.6 1.8 1 1 1 2 2 2 0 MMPL family DUF2203 PF09969.9 ORF91377 - 3.3 8.4 22.5 2.3 9.0 3.7 3.4 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) DUF4164 PF13747.6 ORF91377 - 4.6 7.6 22.2 5.3 7.4 2.2 4.3 3 2 0 3 3 3 0 Domain of unknown function (DUF4164) eRF1_3 PF03465.15 ORF91377 - 6.9 7.2 10.4 0.97 9.9 3.2 2.6 2 1 0 2 2 2 0 eRF1 domain 3 Methyltransf_24 PF13578.6 ORF88282 - 5.9e-09 36.9 0.5 1.4e-08 35.7 0.5 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF88282 - 1.4e-05 25.7 0.1 2.9e-05 24.7 0.1 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF88282 - 0.011 16.4 0.1 0.028 15.1 0.1 1.9 1 1 0 1 1 1 0 Methyltransferase domain CmcI PF04989.12 ORF88282 - 0.071 12.8 0.2 0.12 12.1 0.2 1.3 1 0 0 1 1 1 0 Cephalosporin hydroxylase Methyltransf_3 PF01596.17 ORF88282 - 0.081 12.1 0.0 0.11 11.6 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase DUF3752 PF12572.8 ORF80262 - 6.3 7.3 24.9 0.43 11.1 5.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3752) MqsR_toxin PF15723.5 ORF75846 - 0.1 13.0 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Motility quorum-sensing regulator, toxin of MqsA LUC7 PF03194.15 ORF66372 - 1.6e-67 227.8 17.6 2.3e-67 227.3 17.6 1.2 1 0 0 1 1 1 1 LUC7 N_terminus Baculo_PEP_C PF04513.12 ORF66372 - 0.13 12.3 2.3 0.83 9.7 1.0 2.4 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Glyco_hydro_80 PF13647.6 ORF66372 - 0.13 11.7 0.1 0.2 11.1 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A Apolipoprotein PF01442.18 ORF66372 - 0.14 12.1 7.4 1 9.2 7.4 2.2 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain YtxH PF12732.7 ORF66372 - 0.47 11.0 9.2 0.93 10.1 2.1 3.3 2 1 1 3 3 3 0 YtxH-like protein Atypical_Card PF18461.1 ORF66372 - 0.64 10.3 2.7 0.69 10.2 0.7 2.1 2 0 0 2 2 2 0 Atypical caspase recruitment domain RGS-like PF09128.11 ORF66372 - 0.65 9.7 9.7 0.27 10.9 6.3 2.0 1 1 1 2 2 2 0 Regulator of G protein signalling-like domain DUF883 PF05957.13 ORF66372 - 4.1 8.1 6.3 16 6.2 0.2 3.3 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks37.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks37.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks37.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks37.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:04:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- IQ PF00612.27 NODE_82290_length_193_cov_1.316456_g74349_i0forward_frame_1 - 5.9e-06 25.6 0.0 1.2e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 IQ calmodulin-binding motif TAF8_C PF10406.9 NODE_82289_length_193_cov_1.322785_g74348_i0forward_frame_1 - 0.046 14.3 0.4 0.058 14.0 0.4 1.2 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term Ank_2 PF12796.7 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_1 - 0.0057 17.2 0.0 0.0062 17.1 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_1 - 0.0072 16.6 0.0 0.014 15.7 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_1 - 0.019 15.5 0.1 0.037 14.6 0.1 1.5 1 0 0 1 1 1 0 Ankyrin repeat Ank PF00023.30 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_1 - 0.028 14.9 0.1 0.04 14.4 0.1 1.3 1 0 0 1 1 1 0 Ankyrin repeat Luteo_P1-P2 PF08467.10 NODE_82271_length_193_cov_1.405063_g74330_i0forward_frame_1 - 0.1 11.8 0.6 0.12 11.6 0.6 1.2 1 0 0 1 1 1 0 Luteovirus RNA polymerase P1-P2/replicase DUF1036 PF06282.11 NODE_82259_length_193_cov_1.474684_g74318_i0reverse_frame_1 - 0.057 14.0 0.0 0.057 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1036) Capsid_VP7 PF17071.5 NODE_82258_length_193_cov_1.487342_g74317_i0reverse_frame_1 - 0.21 10.8 0.0 0.26 10.6 0.0 1.0 1 0 0 1 1 1 0 Outer capsid protein VP7 bZIP_2 PF07716.15 NODE_82256_length_193_cov_1.493671_g74315_i0forward_frame_1 - 0.00082 19.4 1.7 0.29 11.3 0.1 2.1 2 0 0 2 2 2 2 Basic region leucine zipper DUF5082 PF16888.5 NODE_82256_length_193_cov_1.493671_g74315_i0forward_frame_1 - 0.001 19.3 3.2 0.36 11.1 0.3 1.9 1 1 1 2 2 2 2 Domain of unknown function (DUF5082) DivIC PF04977.15 NODE_82256_length_193_cov_1.493671_g74315_i0forward_frame_1 - 0.013 15.3 1.9 0.037 13.8 0.3 1.9 1 1 1 2 2 2 0 Septum formation initiator DUF3262 PF11660.8 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_1 - 0.2 12.0 3.9 0.26 11.7 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3262) ALG3 PF05208.13 NODE_82235_length_193_cov_1.518987_g74294_i0forward_frame_1 - 8.4e-05 22.2 3.0 8.5e-05 22.1 3.0 1.0 1 0 0 1 1 1 1 ALG3 protein HTH_Tnp_IS630 PF01710.16 NODE_82235_length_193_cov_1.518987_g74294_i0forward_frame_1 - 0.061 13.4 0.0 0.071 13.2 0.0 1.1 1 0 0 1 1 1 0 Transposase THEG PF14912.6 NODE_82224_length_193_cov_1.518987_g74283_i0forward_frame_1 - 0.029 14.8 0.0 0.034 14.6 0.0 1.2 1 0 0 1 1 1 0 Testicular haploid expressed repeat DUF5074 PF16819.5 NODE_82222_length_193_cov_1.518987_g74281_i0reverse_frame_1 - 0.029 14.4 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5074) DUF2767 PF10965.8 NODE_82217_length_193_cov_1.531646_g74276_i0forward_frame_1 - 0.069 13.1 2.5 0.084 12.9 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2767) TMEM173 PF15009.6 NODE_82216_length_193_cov_1.537975_g74275_i0forward_frame_1 - 0.11 11.7 0.0 0.12 11.5 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 173 Cas_Csy4 PF09618.10 NODE_82210_length_193_cov_1.588608_g74269_i0forward_frame_1 - 0.069 13.3 0.1 0.073 13.2 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) CLP1_P PF16575.5 NODE_82202_length_193_cov_1.620253_g74261_i0reverse_frame_1 - 0.12 12.2 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop LNP1 PF15419.6 NODE_82202_length_193_cov_1.620253_g74261_i0forward_frame_1 - 0.092 13.0 0.1 0.1 12.8 0.1 1.1 1 0 0 1 1 1 0 Leukemia NUP98 fusion partner 1 DUF2490 PF10677.9 NODE_82200_length_193_cov_1.626582_g74259_i0reverse_frame_1 - 0.011 15.7 1.1 0.012 15.5 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2490) LEA_2 PF03168.13 NODE_82200_length_193_cov_1.626582_g74259_i0reverse_frame_1 - 0.06 13.9 1.2 0.38 11.3 1.2 2.1 1 1 0 1 1 1 0 Late embryogenesis abundant protein DUF1943 PF09172.11 NODE_82200_length_193_cov_1.626582_g74259_i0reverse_frame_1 - 0.093 11.9 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) TFA2_Winged_2 PF18121.1 NODE_82197_length_193_cov_1.651899_g74256_i0reverse_frame_1 - 0.011 15.4 0.3 0.015 15.0 0.3 1.2 1 0 0 1 1 1 0 TFA2 Winged helix domain 2 Med9 PF07544.13 NODE_82197_length_193_cov_1.651899_g74256_i0reverse_frame_1 - 0.026 14.6 0.7 0.033 14.3 0.7 1.1 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 DASH_Dam1 PF08653.10 NODE_82197_length_193_cov_1.651899_g74256_i0reverse_frame_1 - 0.058 13.2 0.3 7.7 6.4 0.1 2.1 2 0 0 2 2 2 0 DASH complex subunit Dam1 GARP PF16731.5 NODE_82197_length_193_cov_1.651899_g74256_i0reverse_frame_1 - 0.074 12.7 0.1 0.08 12.6 0.1 1.0 1 0 0 1 1 1 0 Glutamic acid/alanine-rich protein of Trypanosoma DUF5480 PF17576.2 NODE_82192_length_193_cov_1.696203_g74251_i0forward_frame_1 - 0.0099 15.8 0.3 0.012 15.5 0.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5480) Peptidase_A3 PF02160.15 NODE_82186_length_193_cov_1.740506_g74245_i0reverse_frame_1 - 0.0052 16.3 0.1 0.0058 16.1 0.1 1.1 1 0 0 1 1 1 1 Cauliflower mosaic virus peptidase (A3) DUF4644 PF15486.6 NODE_82185_length_193_cov_1.746835_g74244_i0reverse_frame_1 - 0.051 13.3 0.6 0.055 13.2 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4644) HOK_GEF PF01848.16 NODE_82184_length_193_cov_1.753165_g74243_i0forward_frame_1 - 0.053 12.9 0.7 0.08 12.4 0.7 1.3 1 0 0 1 1 1 0 Hok/gef family RVT_1 PF00078.27 NODE_82178_length_193_cov_1.772152_g74237_i0forward_frame_1 - 0.0036 16.9 0.0 0.0038 16.8 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Pyridoxal_deC PF00282.19 NODE_82175_length_193_cov_1.778481_g74234_i0forward_frame_1 - 2.6e-06 26.4 0.0 2.7e-06 26.3 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain DUF746 PF05344.11 NODE_82174_length_193_cov_1.778481_g74233_i0reverse_frame_1 - 0.14 12.1 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) GCK PF07802.11 NODE_82170_length_193_cov_1.848101_g74229_i0forward_frame_1 - 0.068 13.6 0.0 0.088 13.2 0.0 1.1 1 0 0 1 1 1 0 GCK domain Toxin_21 PF08091.11 NODE_82166_length_193_cov_1.873418_g74225_i0forward_frame_1 - 0.055 13.4 2.3 0.057 13.3 0.4 1.8 2 0 0 2 2 2 0 Spider insecticidal peptide Imm43 PF15570.6 NODE_82162_length_193_cov_1.924051_g74221_i0reverse_frame_1 - 0.019 15.0 1.4 0.022 14.8 1.4 1.1 1 0 0 1 1 1 0 Immunity protein 43 AA_permease_C PF13906.6 NODE_82160_length_193_cov_1.943038_g74219_i0reverse_frame_1 - 1.8 8.7 13.3 7.8 6.7 13.0 2.0 1 1 1 2 2 2 0 C-terminus of AA_permease Chitin_synth_2 PF03142.15 NODE_82156_length_193_cov_1.993671_g74215_i0reverse_frame_1 - 3.5e-05 22.6 0.0 3.5e-05 22.6 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 NODE_82156_length_193_cov_1.993671_g74215_i0reverse_frame_1 - 0.00077 19.4 0.0 0.00078 19.4 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 NODE_82156_length_193_cov_1.993671_g74215_i0reverse_frame_1 - 0.0047 16.8 0.0 0.0055 16.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 DnaJ PF00226.31 NODE_82154_length_193_cov_2.000000_g74213_i0forward_frame_1 - 3.4e-10 39.9 0.7 3.9e-10 39.7 0.7 1.1 1 0 0 1 1 1 1 DnaJ domain FSH1 PF03959.13 NODE_82152_length_193_cov_2.006329_g74211_i0forward_frame_1 - 0.0051 16.5 0.0 0.0051 16.5 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) SapA PF02199.15 NODE_82141_length_193_cov_2.025316_g74200_i0forward_frame_1 - 0.039 14.2 0.3 0.072 13.4 0.3 1.5 1 0 0 1 1 1 0 Saposin A-type domain PHZA_PHZB PF03284.13 NODE_82136_length_193_cov_2.063291_g74195_i0reverse_frame_1 - 0.094 12.3 0.2 0.094 12.3 0.2 1.1 1 0 0 1 1 1 0 Phenazine biosynthesis protein A/B RdgC PF04381.12 NODE_82131_length_193_cov_2.113924_g74190_i0forward_frame_1 - 8.3e-22 77.8 0.5 9.5e-22 77.6 0.5 1.0 1 0 0 1 1 1 1 Putative exonuclease, RdgC RCC1 PF00415.18 NODE_82123_length_193_cov_2.259494_g74182_i0forward_frame_1 - 1.5e-06 28.7 0.0 1.9e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_82123_length_193_cov_2.259494_g74182_i0forward_frame_1 - 0.12 12.2 0.8 1.2 9.1 0.1 2.5 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat Ribosomal_L32p PF01783.23 NODE_82110_length_193_cov_2.386076_g74169_i0reverse_frame_1 - 0.028 14.7 0.2 0.047 13.9 0.2 1.4 1 0 0 1 1 1 0 Ribosomal L32p protein family MBOAT PF03062.19 NODE_82108_length_193_cov_2.417722_g74167_i0reverse_frame_1 - 3.4e-17 62.8 2.4 3.7e-17 62.7 2.4 1.0 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family MBOAT_2 PF13813.6 NODE_82108_length_193_cov_2.417722_g74167_i0reverse_frame_1 - 8.7e-06 25.9 2.0 9.4e-06 25.8 2.0 1.0 1 0 0 1 1 1 1 Membrane bound O-acyl transferase family COX6C PF02937.15 NODE_82100_length_193_cov_2.518987_g74159_i0forward_frame_1 - 0.035 14.2 0.2 0.045 13.9 0.2 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc PXT1 PF15214.6 NODE_82100_length_193_cov_2.518987_g74159_i0forward_frame_1 - 0.07 13.5 0.1 0.11 12.9 0.1 1.4 1 0 0 1 1 1 0 Peroxisomal testis-specific protein 1 DpnI PF06044.12 NODE_82095_length_193_cov_2.607595_g74154_i0reverse_frame_1 - 0.21 11.2 0.0 0.24 11.0 0.0 1.0 1 0 0 1 1 1 0 Dam-replacing family LCE6A PF15858.5 NODE_82095_length_193_cov_2.607595_g74154_i0forward_frame_1 - 0.091 13.5 0.7 0.12 13.2 0.3 1.4 1 1 0 1 1 1 0 Late cornified envelope protein 6A family SR-25 PF10500.9 NODE_82089_length_193_cov_2.689873_g74148_i0reverse_frame_1 - 0.03 14.0 9.4 0.034 13.8 9.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_82089_length_193_cov_2.689873_g74148_i0reverse_frame_1 - 0.054 14.2 3.1 0.058 14.1 3.1 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF755 PF05501.11 NODE_82089_length_193_cov_2.689873_g74148_i0reverse_frame_1 - 0.084 13.1 16.4 0.1 12.9 16.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) DUF4636 PF15468.6 NODE_82087_length_193_cov_2.734177_g74146_i0reverse_frame_1 - 0.26 10.9 2.8 0.28 10.9 2.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) Cytochrom_NNT PF03264.14 NODE_82086_length_193_cov_2.772152_g74145_i0reverse_frame_1 - 9.6e-06 25.4 0.2 1.5e-05 24.7 0.2 1.3 1 0 0 1 1 1 1 NapC/NirT cytochrome c family, N-terminal region DUF3915 PF13054.6 NODE_82084_length_193_cov_2.778481_g74143_i0forward_frame_1 - 0.056 13.4 1.4 0.059 13.3 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Pkinase PF00069.25 NODE_82079_length_193_cov_2.955696_g74138_i0forward_frame_1 - 1.7e-08 34.1 0.1 1.8e-08 34.1 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_82079_length_193_cov_2.955696_g74138_i0forward_frame_1 - 2.5e-05 23.7 0.0 2.6e-05 23.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DHHW PF14286.6 NODE_82078_length_193_cov_2.993671_g74137_i0forward_frame_1 - 0.05 12.9 0.0 0.054 12.8 0.0 1.0 1 0 0 1 1 1 0 DHHW protein ICAM_N PF03921.14 NODE_82077_length_193_cov_3.018987_g74136_i0reverse_frame_1 - 0.038 13.7 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain Myticin-prepro PF10690.9 NODE_82075_length_193_cov_3.069620_g74134_i0forward_frame_1 - 6.1 7.2 9.5 6.8 7.0 9.5 1.2 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel HlyD_D23 PF16576.5 NODE_82071_length_193_cov_3.221519_g74130_i0reverse_frame_1 - 0.16 11.1 0.0 0.19 10.9 0.0 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion 6PGD PF00393.19 NODE_82062_length_193_cov_4.000000_g74121_i0forward_frame_1 - 1.2e-17 64.3 0.0 1.3e-17 64.2 0.0 1.0 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain Asp5 PF17000.5 NODE_82060_length_193_cov_4.044304_g74119_i0reverse_frame_1 - 0.033 14.3 0.0 0.034 14.3 0.0 1.1 1 0 0 1 1 1 0 Accessory secretory protein Sec, Asp5 PcF PF09461.10 NODE_82051_length_193_cov_16.278481_g74110_i0reverse_frame_1 - 0.18 12.2 4.5 0.24 11.8 4.5 1.3 1 0 0 1 1 1 0 Phytotoxin PcF protein ATP-synt_8 PF00895.20 NODE_82050_length_193_cov_22.569620_g74109_i0forward_frame_1 - 0.31 11.5 2.3 0.45 11.0 2.3 1.3 1 0 0 1 1 1 0 ATP synthase protein 8 DUF5320 PF17253.2 NODE_82044_length_193_cov_28.037975_g74103_i0reverse_frame_1 - 0.077 14.1 0.2 0.097 13.7 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5320) ChaB PF06150.12 NODE_82042_length_193_cov_28.721519_g74101_i0reverse_frame_1 - 0.14 12.8 2.5 0.18 12.4 2.5 1.2 1 0 0 1 1 1 0 ChaB AgrB PF04647.15 NODE_82034_length_193_cov_34.373418_g74093_i0forward_frame_1 - 0.77 9.0 3.7 0.79 9.0 3.7 1.1 1 0 0 1 1 1 0 Accessory gene regulator B DUF3509 PF12021.8 NODE_82033_length_193_cov_34.626582_g74092_i0reverse_frame_1 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3509) Coilin_N PF15862.5 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_1 - 0.068 13.0 13.7 0.079 12.8 13.7 1.1 1 0 0 1 1 1 0 Coilin N-terminus PGA2 PF07543.12 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_1 - 0.78 9.7 11.4 1 9.4 11.4 1.3 1 0 0 1 1 1 0 Protein trafficking PGA2 RNA_polI_A34 PF08208.11 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_1 - 2.1 8.4 17.3 2.3 8.2 17.3 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 GPDPase_memb PF10110.9 NODE_82017_length_193_cov_45.303797_g74076_i0forward_frame_1 - 0.17 10.6 2.9 0.24 10.2 2.9 1.2 1 0 0 1 1 1 0 Membrane domain of glycerophosphoryl diester phosphodiesterase Integrin_beta PF00362.18 NODE_82016_length_193_cov_45.424051_g74075_i0forward_frame_1 - 0.08 12.6 0.0 0.091 12.4 0.0 1.0 1 0 0 1 1 1 0 Integrin beta chain VWA domain DUF2269 PF10027.9 NODE_82005_length_193_cov_64.905063_g74064_i0forward_frame_1 - 0.042 13.9 0.0 0.046 13.8 0.0 1.0 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2269) PLRV_ORF5 PF01690.17 NODE_81998_length_193_cov_73.753165_g74057_i0reverse_frame_1 - 0.065 12.0 0.1 0.068 11.9 0.1 1.0 1 0 0 1 1 1 0 Potato leaf roll virus readthrough protein Coa1 PF08695.10 NODE_81993_length_193_cov_81.025316_g74052_i0reverse_frame_1 - 0.16 11.7 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 Lipoprotein_2 PF00921.17 NODE_81993_length_193_cov_81.025316_g74052_i0forward_frame_1 - 0.038 13.6 0.3 0.043 13.4 0.3 1.0 1 0 0 1 1 1 0 Borrelia lipoprotein STAT1_TAZ2bind PF12162.8 NODE_81993_length_193_cov_81.025316_g74052_i0forward_frame_1 - 0.1 12.2 0.2 0.21 11.2 0.2 1.5 1 0 0 1 1 1 0 STAT1 TAZ2 binding domain Enkurin PF13864.6 NODE_81974_length_193_cov_223.500000_g74033_i0forward_frame_1 - 0.025 15.0 0.8 0.037 14.5 0.8 1.2 1 0 0 1 1 1 0 Calmodulin-binding DUF1754 PF08555.10 NODE_81970_length_193_cov_265.797468_g74029_i0reverse_frame_1 - 0.063 14.1 6.4 0.099 13.5 6.4 1.3 1 0 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) Enkurin PF13864.6 NODE_81968_length_193_cov_356.316456_g74027_i0reverse_frame_1 - 0.025 15.0 0.8 0.037 14.5 0.8 1.2 1 0 0 1 1 1 0 Calmodulin-binding Enkurin PF13864.6 NODE_81966_length_193_cov_406.303797_g74025_i0reverse_frame_1 - 0.025 15.0 0.8 0.037 14.5 0.8 1.2 1 0 0 1 1 1 0 Calmodulin-binding TPR_11 PF13414.6 NODE_81963_length_193_cov_3283.170886_g74022_i0forward_frame_1 - 0.033 13.9 0.1 0.18 11.5 0.0 2.0 2 0 0 2 2 2 0 TPR repeat DUF2855 PF11017.8 NODE_81959_length_194_cov_0.836478_g74018_i0forward_frame_1 - 0.2 11.4 0.1 0.2 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) Pkinase PF00069.25 NODE_81952_length_194_cov_0.930818_g74011_i0reverse_frame_1 - 1.4e-09 37.7 0.8 1.7e-09 37.4 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_81952_length_194_cov_0.930818_g74011_i0reverse_frame_1 - 1.5e-06 27.7 0.1 1.8e-06 27.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_81952_length_194_cov_0.930818_g74011_i0reverse_frame_1 - 0.0086 14.9 0.2 0.0093 14.8 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase Pkinase PF00069.25 NODE_81945_length_194_cov_0.993711_g74004_i0forward_frame_1 - 3.1e-12 46.4 0.0 3.1e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_81945_length_194_cov_0.993711_g74004_i0forward_frame_1 - 6.5e-07 28.9 0.0 6.7e-07 28.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase BTK PF00779.19 NODE_81940_length_194_cov_1.000000_g73999_i0reverse_frame_1 - 1.6 8.6 9.1 3.3 7.6 1.4 2.3 1 1 1 2 2 2 0 BTK motif CHORD PF04968.12 NODE_81940_length_194_cov_1.000000_g73999_i0reverse_frame_1 - 2.9 8.7 6.6 6.5 7.6 0.5 2.1 1 1 1 2 2 2 0 CHORD HHH_8 PF14716.6 NODE_81936_length_194_cov_1.000000_g73995_i0forward_frame_1 - 0.16 12.4 0.0 0.19 12.1 0.0 1.1 1 0 0 1 1 1 0 Helix-hairpin-helix domain FAM124 PF15067.6 NODE_81933_length_194_cov_1.000000_g73992_i0forward_frame_1 - 0.084 12.5 0.4 0.083 12.5 0.4 1.0 1 0 0 1 1 1 0 FAM124 family NrfD_2 PF14589.6 NODE_81930_length_194_cov_1.000000_g73989_i0reverse_frame_1 - 0.026 14.5 0.1 0.029 14.4 0.1 1.0 1 0 0 1 1 1 0 Polysulfide reductase Prok-E2_B PF14461.6 NODE_81915_length_194_cov_1.006289_g73974_i0reverse_frame_1 - 0.054 13.2 0.4 0.061 13.0 0.4 1.0 1 0 0 1 1 1 0 Prokaryotic E2 family B NADH_dhqG_C PF09326.11 NODE_81910_length_194_cov_1.006289_g73969_i0forward_frame_1 - 0.11 13.2 0.0 0.16 12.7 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit G, C-terminal CoatB PF10389.9 NODE_81893_length_194_cov_1.006289_g73952_i0forward_frame_1 - 0.21 11.5 0.9 0.31 10.9 0.9 1.3 1 0 0 1 1 1 0 Bacteriophage coat protein B Adeno_E3_CR2 PF02439.15 NODE_81893_length_194_cov_1.006289_g73952_i0forward_frame_1 - 2 8.3 4.7 2.8 7.8 4.7 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 JTB PF05439.12 NODE_81885_length_194_cov_1.006289_g73944_i0forward_frame_1 - 0.082 13.0 0.1 0.095 12.8 0.1 1.0 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) Spc42p PF11544.8 NODE_81881_length_194_cov_1.006289_g73940_i0reverse_frame_1 - 0.035 14.1 2.8 0.041 13.9 2.8 1.2 1 0 0 1 1 1 0 Spindle pole body component Spc42p ASFV_360 PF01671.16 NODE_81878_length_194_cov_1.006289_g73937_i0reverse_frame_1 - 0.023 14.2 0.3 0.024 14.1 0.3 1.0 1 0 0 1 1 1 0 African swine fever virus multigene family 360 protein Papo_T_antigen PF02380.15 NODE_81876_length_194_cov_1.006289_g73935_i0reverse_frame_1 - 0.016 15.4 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 T-antigen specific domain Herpes_ICP4_C PF03585.14 NODE_81875_length_194_cov_1.006289_g73934_i0reverse_frame_1 - 0.1 11.3 0.0 0.12 11.1 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus ICP4-like protein C-terminal region Myc_target_1 PF15179.6 NODE_81874_length_194_cov_1.006289_g73933_i0forward_frame_1 - 0.21 11.5 0.1 0.24 11.3 0.1 1.1 1 0 0 1 1 1 0 Myc target protein 1 Nudix_N_2 PF14803.6 NODE_81863_length_194_cov_1.056604_g73922_i0forward_frame_1 - 0.099 12.6 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Nudix N-terminal HNH_5 PF14279.6 NODE_81859_length_194_cov_1.081761_g73918_i0forward_frame_1 - 0.084 12.7 0.2 0.11 12.3 0.2 1.2 1 0 0 1 1 1 0 HNH endonuclease Kelch_6 PF13964.6 NODE_81850_length_194_cov_1.113208_g73909_i0reverse_frame_1 - 0.11 12.8 1.0 0.15 12.4 1.0 1.2 1 0 0 1 1 1 0 Kelch motif DUF615 PF04751.14 NODE_81849_length_194_cov_1.119497_g73908_i0forward_frame_1 - 0.15 12.1 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF615) TMEM61 PF15105.6 NODE_81847_length_194_cov_1.132075_g73906_i0forward_frame_1 - 1.3 8.8 3.1 1.5 8.6 3.1 1.1 1 0 0 1 1 1 0 TMEM61 protein family DUF2207 PF09972.9 NODE_81847_length_194_cov_1.132075_g73906_i0forward_frame_1 - 1.4 7.5 3.3 1.5 7.5 3.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PurS PF02700.14 NODE_81844_length_194_cov_1.138365_g73903_i0reverse_frame_1 - 0.15 12.2 0.0 2 8.6 0.0 2.0 1 1 1 2 2 2 0 Phosphoribosylformylglycinamidine (FGAM) synthase Acetyltransf_1 PF00583.25 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 7.5e-09 35.9 0.0 8.5e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 2.3e-08 34.3 0.0 2.4e-08 34.3 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 1.1e-06 28.5 0.0 1.3e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 2.7e-06 27.3 0.0 3e-06 27.2 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.00024 21.8 0.0 0.00028 21.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.00087 19.7 0.0 0.0011 19.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.0017 18.0 0.0 0.0019 17.8 0.0 1.0 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_CG PF14542.6 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.0044 17.1 0.1 0.0062 16.6 0.1 1.2 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase EAL PF00563.20 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.059 12.9 0.0 0.067 12.7 0.0 1.1 1 0 0 1 1 1 0 EAL domain Sugar_tr PF00083.24 NODE_81829_length_194_cov_1.220126_g73888_i0forward_frame_1 - 3e-05 23.1 4.0 3.3e-05 22.9 4.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_81829_length_194_cov_1.220126_g73888_i0forward_frame_1 - 0.0089 15.0 7.3 0.0095 14.9 7.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF5592 PF17332.2 NODE_81829_length_194_cov_1.220126_g73888_i0forward_frame_1 - 0.1 13.1 2.2 0.13 12.8 2.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5592) EutK_C PF16365.5 NODE_81817_length_194_cov_1.251572_g73876_i0forward_frame_1 - 0.061 13.4 0.1 0.068 13.2 0.1 1.2 1 0 0 1 1 1 0 Ethanolamine utilization protein EutK C-terminus T6SS_HCP PF05638.12 NODE_81816_length_194_cov_1.257862_g73875_i0forward_frame_1 - 3.7e-05 24.1 0.0 3.9e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion system effector, Hcp DUF1140 PF06600.11 NODE_81815_length_194_cov_1.257862_g73874_i0forward_frame_1 - 0.028 14.9 0.1 0.034 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1140) Epimerase PF01370.21 NODE_81807_length_194_cov_1.270440_g73866_i0reverse_frame_1 - 9.8e-06 25.2 0.0 1.2e-05 25.0 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 NODE_81807_length_194_cov_1.270440_g73866_i0reverse_frame_1 - 0.0026 17.2 0.0 0.0028 17.1 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase TMCO5 PF14992.6 NODE_81800_length_194_cov_1.295597_g73859_i0forward_frame_1 - 0.57 9.7 2.3 0.6 9.6 2.3 1.0 1 0 0 1 1 1 0 TMCO5 family RRN9 PF10680.9 NODE_81798_length_194_cov_1.308176_g73857_i0reverse_frame_1 - 0.08 13.2 0.4 0.093 13.0 0.4 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor HscB_4_cys PF18256.1 NODE_81794_length_194_cov_1.333333_g73853_i0forward_frame_1 - 0.0058 16.4 4.4 0.011 15.6 4.4 1.5 1 0 0 1 1 1 1 Co-chaperone HscB tetracysteine metal binding motif Dicty_REP PF05086.12 NODE_81792_length_194_cov_1.333333_g73851_i0reverse_frame_1 - 2.8 5.8 3.1 2.6 5.9 3.1 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein SSP160 PF06933.11 NODE_81792_length_194_cov_1.333333_g73851_i0reverse_frame_1 - 3.3 5.8 6.8 3.6 5.7 6.8 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF5607 PF18355.1 NODE_81788_length_194_cov_1.377358_g73847_i0reverse_frame_1 - 0.089 13.2 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5607) cNMP_binding PF00027.29 NODE_81786_length_194_cov_1.383648_g73845_i0forward_frame_1 - 8.6e-13 48.2 0.0 9.8e-13 48.0 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DNA_pol_viral_C PF00336.18 NODE_81781_length_194_cov_1.415094_g73840_i0reverse_frame_1 - 0.063 12.7 0.0 0.071 12.5 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) C-terminal domain RVT_2 PF07727.14 NODE_81776_length_194_cov_1.421384_g73835_i0forward_frame_1 - 0.0091 15.7 1.0 0.0092 15.6 1.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4959 PF16323.5 NODE_81775_length_194_cov_1.433962_g73834_i0forward_frame_1 - 0.095 13.0 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4959) DUF1196 PF06709.11 NODE_81772_length_194_cov_1.440252_g73831_i0forward_frame_1 - 0.067 13.4 0.1 0.086 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1196) Tom5 PF10642.9 NODE_81771_length_194_cov_1.459119_g73830_i0forward_frame_1 - 0.041 13.9 0.2 1.7 8.7 0.0 2.1 1 1 1 2 2 2 0 Mitochondrial import receptor subunit or translocase DUF5480 PF17576.2 NODE_81771_length_194_cov_1.459119_g73830_i0forward_frame_1 - 0.046 13.7 0.1 0.056 13.4 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5480) SR-25 PF10500.9 NODE_81763_length_194_cov_1.490566_g73822_i0reverse_frame_1 - 0.008 15.8 10.1 0.0081 15.8 10.1 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_81763_length_194_cov_1.490566_g73822_i0reverse_frame_1 - 2.2 9.0 11.8 2.7 8.7 11.8 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein SLAIN PF15301.6 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 0.015 14.6 2.5 0.016 14.5 2.5 1.0 1 0 0 1 1 1 0 SLAIN motif-containing family CENP-B_dimeris PF09026.10 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 0.59 10.6 11.3 0.67 10.4 11.3 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain RXT2_N PF08595.11 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 0.64 10.0 4.3 0.71 9.9 4.3 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal PBP1_TM PF14812.6 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 5.6 7.4 11.7 6.4 7.2 11.7 1.3 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DNA_pol_phi PF04931.13 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 9.6 4.2 8.1 9.3 4.2 8.1 1.0 1 0 0 1 1 1 0 DNA polymerase phi Meckelin PF09773.9 NODE_81757_length_194_cov_1.490566_g73816_i0reverse_frame_1 - 4.1 5.4 6.3 4.7 5.2 6.3 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) MetJ PF01340.20 NODE_81756_length_194_cov_1.496855_g73815_i0forward_frame_1 - 0.068 13.1 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Met Apo-repressor, MetJ DUF3689 PF12463.8 NODE_81749_length_194_cov_1.503145_g73808_i0forward_frame_1 - 0.11 11.8 0.3 0.11 11.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3689) Transketolase_C PF02780.20 NODE_81736_length_194_cov_1.509434_g73795_i0reverse_frame_1 - 6.9e-06 25.9 0.1 8.9e-06 25.6 0.1 1.1 1 0 0 1 1 1 1 Transketolase, C-terminal domain Alba PF01918.21 NODE_81736_length_194_cov_1.509434_g73795_i0reverse_frame_1 - 0.002 17.9 0.1 0.0021 17.9 0.1 1.2 1 0 0 1 1 1 1 Alba VitD-bind_III PF09164.10 NODE_81736_length_194_cov_1.509434_g73795_i0forward_frame_1 - 0.031 14.2 0.1 0.04 13.9 0.1 1.2 1 0 0 1 1 1 0 Vitamin D binding protein, domain III HD_4 PF13328.6 NODE_81728_length_194_cov_1.509434_g73787_i0reverse_frame_1 - 3.3e-05 23.7 0.0 5.5e-05 22.9 0.0 1.4 2 0 0 2 2 2 1 HD domain Sigma70_r4 PF04545.16 NODE_81728_length_194_cov_1.509434_g73787_i0reverse_frame_1 - 0.067 12.7 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 ABC2_membrane_2 PF12679.7 NODE_81723_length_194_cov_1.534591_g73782_i0reverse_frame_1 - 0.069 12.4 2.9 0.079 12.2 2.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Toxin_14 PF07829.11 NODE_81714_length_194_cov_1.610063_g73773_i0reverse_frame_1 - 0.0054 16.6 3.4 0.013 15.5 3.4 1.7 1 0 0 1 1 1 1 Alpha-A conotoxin PIVA-like protein DUF3285 PF11688.8 NODE_81712_length_194_cov_1.610063_g73771_i0reverse_frame_1 - 0.069 13.1 0.2 1.2 9.2 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3285) ATP1G1_PLM_MAT8 PF02038.16 NODE_81712_length_194_cov_1.610063_g73771_i0reverse_frame_1 - 0.11 11.9 0.6 0.14 11.6 0.6 1.2 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family E1-E2_ATPase PF00122.20 NODE_81711_length_194_cov_1.622642_g73770_i0forward_frame_1 - 0.23 11.0 0.5 0.23 11.0 0.5 1.1 1 0 0 1 1 1 0 E1-E2 ATPase DDE_Tnp_1_6 PF13751.6 NODE_81708_length_194_cov_1.647799_g73767_i0forward_frame_1 - 0.69 10.1 5.2 0.76 10.0 5.2 1.1 1 0 0 1 1 1 0 Transposase DDE domain Opy2 PF09463.10 NODE_81708_length_194_cov_1.647799_g73767_i0forward_frame_1 - 2 8.8 12.4 0.43 10.9 2.0 3.2 2 2 1 3 3 3 0 Opy2 protein EPF PF17181.4 NODE_81706_length_194_cov_1.660377_g73765_i0forward_frame_1 - 0.035 14.1 0.1 0.039 13.9 0.1 1.2 1 0 0 1 1 1 0 Epidermal patterning factor proteins DUF3627 PF12299.8 NODE_81702_length_194_cov_1.685535_g73761_i0forward_frame_1 - 0.03 14.4 0.0 0.034 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3627) Herpes_LMP1 PF05297.11 NODE_81694_length_194_cov_1.710692_g73753_i0reverse_frame_1 - 0.016 14.5 0.3 0.016 14.4 0.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Alpha-amyl_C2 PF07821.12 NODE_81692_length_194_cov_1.716981_g73751_i0reverse_frame_1 - 0.0051 17.0 0.0 0.0056 16.9 0.0 1.1 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain LAX PF15681.5 NODE_81691_length_194_cov_1.716981_g73750_i0forward_frame_1 - 0.15 10.8 0.1 0.16 10.8 0.1 1.0 1 0 0 1 1 1 0 Lymphocyte activation family X RST PF12174.8 NODE_81687_length_194_cov_1.754717_g73746_i0reverse_frame_1 - 0.1 12.6 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 RCD1-SRO-TAF4 (RST) plant domain TLE_N PF03920.15 NODE_81687_length_194_cov_1.754717_g73746_i0forward_frame_1 - 0.02 15.0 0.4 0.02 15.0 0.4 1.1 1 0 0 1 1 1 0 Groucho/TLE N-terminal Q-rich domain UL42 PF17638.2 NODE_81682_length_194_cov_1.767296_g73741_i0reverse_frame_1 - 0.0025 17.8 0.2 0.0029 17.6 0.2 1.1 1 0 0 1 1 1 1 HCMV UL42 Sugar_tr PF00083.24 NODE_81682_length_194_cov_1.767296_g73741_i0reverse_frame_1 - 0.019 13.8 0.8 0.023 13.6 0.8 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter MFS_1 PF07690.16 NODE_81682_length_194_cov_1.767296_g73741_i0reverse_frame_1 - 0.024 13.6 0.6 0.028 13.3 0.6 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF4491 PF14898.6 NODE_81682_length_194_cov_1.767296_g73741_i0reverse_frame_1 - 0.069 13.6 0.2 0.079 13.4 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) PapD_C PF02753.17 NODE_81673_length_194_cov_1.867925_g73732_i0reverse_frame_1 - 0.11 12.8 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Pili assembly chaperone PapD, C-terminal domain RIH_assoc PF08454.11 NODE_81664_length_194_cov_1.943396_g73723_i0reverse_frame_1 - 0.19 11.6 3.0 0.25 11.2 3.0 1.1 1 0 0 1 1 1 0 RyR and IP3R Homology associated MIF4G_like PF09088.11 NODE_81663_length_194_cov_1.955975_g73722_i0forward_frame_1 - 0.17 11.7 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 MIF4G like DUF1181 PF06680.11 NODE_81656_length_194_cov_2.006289_g73715_i0forward_frame_1 - 0.14 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1181) SNF PF00209.18 NODE_81651_length_194_cov_2.056604_g73710_i0reverse_frame_1 - 1.1e-19 70.6 2.5 1.1e-19 70.5 2.5 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family Chisel PF15355.6 NODE_81650_length_194_cov_2.056604_g73709_i0forward_frame_1 - 0.017 15.3 0.0 0.02 15.1 0.0 1.1 1 0 0 1 1 1 0 Stretch-responsive small skeletal muscle X protein, Chisel SelP_C PF04593.14 NODE_81649_length_194_cov_2.075472_g73708_i0forward_frame_1 - 0.029 14.4 5.7 0.032 14.2 5.7 1.0 1 0 0 1 1 1 0 Selenoprotein P, C terminal region Amastin PF07344.11 NODE_81645_length_194_cov_2.157233_g73704_i0forward_frame_1 - 0.063 13.1 0.4 0.074 12.9 0.4 1.1 1 0 0 1 1 1 0 Amastin surface glycoprotein Pox_E10 PF04805.12 NODE_81643_length_194_cov_2.176101_g73702_i0reverse_frame_1 - 1.4 8.8 4.1 8 6.4 1.2 2.1 1 1 1 2 2 2 0 E10-like protein conserved region Peptidase_M14 PF00246.24 NODE_81638_length_194_cov_2.257862_g73697_i0reverse_frame_1 - 6.4e-11 42.6 0.0 6.8e-11 42.5 0.0 1.0 1 0 0 1 1 1 1 Zinc carboxypeptidase Zip PF02535.22 NODE_81636_length_194_cov_2.264151_g73695_i0reverse_frame_1 - 0.25 10.5 4.2 0.29 10.3 4.2 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Methyltransf_32 PF13679.6 NODE_81620_length_194_cov_2.477987_g73679_i0forward_frame_1 - 0.054 13.5 4.8 0.067 13.2 4.8 1.1 1 0 0 1 1 1 0 Methyltransferase domain HIRA_B PF09453.10 NODE_81615_length_194_cov_2.572327_g73674_i0reverse_frame_1 - 0.0081 16.0 0.4 0.015 15.1 0.0 1.6 2 0 0 2 2 2 1 HIRA B motif DUF5463 PF17551.2 NODE_81603_length_194_cov_2.937107_g73662_i0reverse_frame_1 - 0.4 10.6 3.2 4.1 7.4 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5463) AAA_11 PF13086.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 3.4e-12 46.7 0.3 3.7e-12 46.6 0.3 1.0 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 6.5e-08 32.5 0.0 6.9e-08 32.4 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 3.9e-06 27.3 0.2 4.2e-06 27.1 0.2 1.0 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 3.8e-05 23.8 0.0 4.4e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF2075 PF09848.9 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 4.9e-05 22.7 0.0 5.6e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) DEAD PF00270.29 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.00047 20.0 0.4 0.00051 19.9 0.4 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0015 18.8 0.0 0.0018 18.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain PhoH PF02562.16 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0018 17.8 0.0 0.002 17.6 0.0 1.0 1 0 0 1 1 1 1 PhoH-like protein AAA_10 PF12846.7 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0052 15.8 0.0 0.0054 15.7 0.0 1.0 1 0 0 1 1 1 1 AAA-like domain Mg_chelatase PF01078.21 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0054 16.1 0.0 0.0058 16.0 0.0 1.1 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Helicase_RecD PF05127.14 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0074 16.2 0.0 0.0096 15.8 0.0 1.2 1 0 0 1 1 1 1 Helicase ATPase PF06745.13 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0097 15.3 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_16 PF13191.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.011 16.1 0.0 0.012 16.0 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Sigma54_activat PF00158.26 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.013 15.2 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain RuvB_N PF05496.12 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.013 15.2 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.021 15.0 0.1 0.025 14.7 0.1 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.025 14.5 0.0 0.029 14.3 0.0 1.1 1 0 0 1 1 1 0 NACHT domain RNA_helicase PF00910.22 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.026 14.9 0.0 0.035 14.5 0.0 1.2 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.03 14.0 0.0 0.03 14.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA PF00004.29 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.033 14.6 0.1 0.041 14.3 0.1 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.036 13.5 0.0 0.04 13.4 0.0 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain T2SSE PF00437.20 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.042 12.9 0.0 0.044 12.8 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_7 PF12775.7 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.043 13.3 0.0 0.044 13.3 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.05 13.6 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.076 12.6 0.0 0.076 12.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.091 11.9 0.0 0.091 11.9 0.0 1.0 1 0 0 1 1 1 0 PIF1-like helicase SRP54 PF00448.22 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.093 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_24 PF13479.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.094 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain ArsA_ATPase PF02374.15 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.13 11.4 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Anion-transporting ATPase TsaE PF02367.17 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.14 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DsbC_N PF10411.9 NODE_81589_length_194_cov_3.710692_g73648_i0forward_frame_1 - 0.012 15.1 0.5 0.017 14.5 0.1 1.6 2 0 0 2 2 2 0 Disulfide bond isomerase protein N-terminus DUF4667 PF15700.5 NODE_81587_length_194_cov_3.874214_g73646_i0forward_frame_1 - 3.7 7.6 14.4 3.9 7.5 14.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4667) CRM1_repeat_2 PF18784.1 NODE_81583_length_194_cov_4.471698_g73642_i0reverse_frame_1 - 0.17 11.6 0.1 0.25 11.0 0.1 1.2 1 0 0 1 1 1 0 CRM1 / Exportin repeat 2 DUF1741 PF08427.10 NODE_81581_length_194_cov_4.886792_g73640_i0reverse_frame_1 - 0.053 13.2 3.0 0.057 13.1 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1741) RNA_pol_Rpb1_R PF05001.13 NODE_81577_length_194_cov_10.930818_g73636_i0reverse_frame_1 - 0.2 12.1 0.6 0.2 12.1 0.6 2.1 3 0 0 3 3 3 0 RNA polymerase Rpb1 C-terminal repeat STAS PF01740.21 NODE_81575_length_194_cov_16.025157_g73634_i0forward_frame_1 - 0.13 11.9 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 STAS domain DUF1477 PF07346.11 NODE_81571_length_194_cov_21.735849_g73630_i0reverse_frame_1 - 0.028 14.7 0.3 0.031 14.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1477) Toxin_7 PF05980.12 NODE_81569_length_194_cov_22.496855_g73628_i0forward_frame_1 - 0.073 13.3 1.5 0.096 13.0 0.7 1.6 2 0 0 2 2 2 0 Toxin 7 DUF2830 PF11125.8 NODE_81562_length_194_cov_28.729560_g73621_i0forward_frame_1 - 0.085 12.8 3.1 0.93 9.5 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2830) DUF1375 PF07119.12 NODE_81560_length_194_cov_29.792453_g73619_i0forward_frame_1 - 0.17 12.3 1.4 1.2 9.6 1.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1375) PPDFL PF15060.6 NODE_81558_length_194_cov_30.490566_g73617_i0reverse_frame_1 - 0.11 13.0 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Differentiation and proliferation regulator ATP_sub_h PF10775.9 NODE_81555_length_194_cov_34.641509_g73614_i0reverse_frame_1 - 0.053 13.5 0.3 0.063 13.3 0.1 1.3 1 1 0 1 1 1 0 ATP synthase complex subunit h Ala_racemase_N PF01168.20 NODE_81554_length_194_cov_35.069182_g73613_i0forward_frame_1 - 0.0075 15.9 0.0 0.008 15.8 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks380.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks380.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks380.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks380.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PNK3P PF08645.11 NODE_81547_length_194_cov_40.301887_g73606_i0reverse_frame_1 - 0.013 15.2 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase DUF3399 PF11879.8 NODE_81542_length_194_cov_43.459119_g73601_i0reverse_frame_1 - 0.057 13.8 1.7 0.065 13.6 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) Hydrolase_4 PF12146.8 NODE_81535_length_194_cov_51.245283_g73594_i0reverse_frame_1 - 0.024 13.9 0.0 0.024 13.9 0.0 1.0 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF2633 PF11119.8 NODE_81526_length_194_cov_58.169811_g73585_i0reverse_frame_1 - 1.1 9.2 3.4 2.3 8.2 3.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2633) DUF2628 PF10947.8 NODE_81511_length_194_cov_94.352201_g73570_i0reverse_frame_1 - 0.57 10.6 4.0 0.86 10.0 4.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) RFX5_N PF18326.1 NODE_81510_length_194_cov_94.496855_g73569_i0reverse_frame_1 - 0.0098 15.6 0.4 2.3 8.0 0.0 2.3 2 1 0 2 2 2 2 RFX5 N-terminal domain SPT6_acidic PF14632.6 NODE_81508_length_194_cov_96.968553_g73567_i0reverse_frame_1 - 0.24 12.0 9.4 0.55 10.8 9.4 1.6 1 1 0 1 1 1 0 Acidic N-terminal SPT6 SR-25 PF10500.9 NODE_81508_length_194_cov_96.968553_g73567_i0reverse_frame_1 - 0.43 10.1 14.3 0.43 10.1 14.3 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein AP3D1 PF06375.11 NODE_81508_length_194_cov_96.968553_g73567_i0reverse_frame_1 - 0.78 10.0 10.0 0.98 9.6 10.0 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Myticin-prepro PF10690.9 NODE_81506_length_194_cov_101.044025_g73565_i0forward_frame_1 - 0.075 13.3 0.2 0.075 13.3 0.2 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel ETRAMP PF09716.10 NODE_81498_length_194_cov_147.125786_g73557_i0reverse_frame_1 - 0.22 11.6 5.2 0.28 11.3 5.2 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) zf-HYPF PF07503.12 NODE_81496_length_194_cov_149.955975_g73555_i0forward_frame_1 - 0.0044 16.7 2.1 0.039 13.7 2.1 2.0 1 1 0 1 1 1 1 HypF finger DUF4694 PF15765.5 NODE_81493_length_194_cov_222.106918_g73552_i0forward_frame_1 - 0.098 12.7 1.2 0.098 12.7 1.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) DUF3599 PF12206.8 NODE_81489_length_194_cov_317.962264_g73548_i0reverse_frame_1 - 0.12 12.7 0.3 0.14 12.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3599) HTH_30 PF13556.6 NODE_81480_length_195_cov_0.775000_g73539_i0forward_frame_1 - 0.081 12.7 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain GlutR_dimer PF00745.20 NODE_81479_length_195_cov_0.868750_g73538_i0reverse_frame_1 - 0.023 15.1 0.2 0.028 14.9 0.2 1.1 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain DUF2583 PF10762.9 NODE_81477_length_195_cov_0.881250_g73536_i0reverse_frame_1 - 7.5e-23 80.8 1.1 9.7e-23 80.4 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2583) Quaking_NLS PF16551.5 NODE_81470_length_195_cov_0.943750_g73529_i0reverse_frame_1 - 0.026 14.2 0.2 0.037 13.7 0.2 1.2 1 0 0 1 1 1 0 Putative nuclear localisation signal of quaking CSRNP_N PF16019.5 NODE_81465_length_195_cov_0.981250_g73524_i0forward_frame_1 - 5.5 6.8 8.7 6.6 6.6 8.7 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus GAS2 PF02187.17 NODE_81460_length_195_cov_0.987500_g73519_i0forward_frame_1 - 0.0062 16.6 0.0 0.0089 16.1 0.0 1.3 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain DUF4491 PF14898.6 NODE_81451_length_195_cov_0.993750_g73510_i0forward_frame_1 - 0.07 13.6 0.0 0.09 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) Arg_decarb_HB PF17810.1 NODE_81450_length_195_cov_0.993750_g73509_i0reverse_frame_1 - 0.039 14.2 0.0 0.047 14.0 0.0 1.1 1 0 0 1 1 1 0 Arginine decarboxylase helical bundle domain MogR_DNAbind PF12181.8 NODE_81444_length_195_cov_0.993750_g73503_i0reverse_frame_1 - 0.0068 16.3 0.0 0.0073 16.2 0.0 1.0 1 0 0 1 1 1 1 DNA binding domain of the motility gene repressor (MogR) zf-CCCH_7 PF18586.1 NODE_81434_length_195_cov_1.000000_g73493_i0reverse_frame_1 - 0.096 13.0 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 ESF1 PF18209.1 NODE_81429_length_195_cov_1.000000_g73488_i0forward_frame_1 - 0.73 9.8 7.3 2.6 8.0 0.8 2.3 2 0 0 2 2 2 0 Embryo surrounding factor 1 DEK_C PF08766.11 NODE_81427_length_195_cov_1.000000_g73486_i0forward_frame_1 - 0.16 11.9 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 DEK C terminal domain APP_N PF02177.16 NODE_81424_length_195_cov_1.000000_g73483_i0reverse_frame_1 - 0.046 14.1 0.0 0.049 14.0 0.0 1.1 1 0 0 1 1 1 0 Amyloid A4 N-terminal heparin-binding ABC_trans_N PF14510.6 NODE_81393_length_195_cov_1.000000_g73452_i0reverse_frame_1 - 0.0044 17.6 0.3 0.035 14.7 0.0 1.9 1 1 1 2 2 2 1 ABC-transporter N-terminal Dicer_dimer PF03368.14 NODE_81387_length_195_cov_1.000000_g73446_i0forward_frame_1 - 0.082 13.1 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Dicer dimerisation domain FANC_SAP PF18081.1 NODE_81382_length_195_cov_1.000000_g73441_i0forward_frame_1 - 0.63 10.2 4.1 0.28 11.4 0.6 1.9 1 1 1 2 2 2 0 Fanconi anemia-associated nuclease SAP domain CCDC24 PF15669.5 NODE_81376_length_195_cov_1.056250_g73435_i0forward_frame_1 - 0.045 13.6 0.0 0.045 13.6 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family EGF_3 PF12947.7 NODE_81374_length_195_cov_1.062500_g73433_i0reverse_frame_1 - 0.079 13.2 0.6 0.1 12.8 0.6 1.2 1 0 0 1 1 1 0 EGF domain EGF_MSP1_1 PF12946.7 NODE_81374_length_195_cov_1.062500_g73433_i0reverse_frame_1 - 0.08 13.0 0.7 0.11 12.6 0.7 1.2 1 0 0 1 1 1 0 MSP1 EGF domain 1 DUF1375 PF07119.12 NODE_81361_length_195_cov_1.137500_g73420_i0forward_frame_1 - 0.031 14.7 0.0 0.034 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1375) DUF3433 PF11915.8 NODE_81357_length_195_cov_1.150000_g73416_i0forward_frame_1 - 0.0012 19.2 0.1 0.0015 18.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3433) DUF3611 PF12263.8 NODE_81357_length_195_cov_1.150000_g73416_i0forward_frame_1 - 0.024 14.5 0.0 0.027 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) Vma12 PF11712.8 NODE_81354_length_195_cov_1.175000_g73413_i0reverse_frame_1 - 0.032 14.3 0.3 0.037 14.1 0.3 1.0 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase eIF-5a PF01287.20 NODE_81339_length_195_cov_1.237500_g73398_i0reverse_frame_1 - 0.19 11.9 0.5 0.23 11.6 0.5 1.2 1 0 0 1 1 1 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold YniB PF14002.6 NODE_81339_length_195_cov_1.237500_g73398_i0forward_frame_1 - 0.07 12.9 3.4 0.085 12.6 3.4 1.0 1 0 0 1 1 1 0 YniB-like protein Glyco_hydro_59M PF17387.2 NODE_81338_length_195_cov_1.237500_g73397_i0forward_frame_1 - 0.063 13.4 0.0 0.066 13.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 central domain DUF3153 PF11353.8 NODE_81338_length_195_cov_1.237500_g73397_i0forward_frame_1 - 0.1 12.2 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3153) Pkinase PF00069.25 NODE_81328_length_195_cov_1.250000_g73387_i0reverse_frame_1 - 2.6e-09 36.8 0.0 2.8e-09 36.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_81328_length_195_cov_1.250000_g73387_i0reverse_frame_1 - 1.9e-05 24.1 0.0 2.1e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_81328_length_195_cov_1.250000_g73387_i0reverse_frame_1 - 0.0034 16.8 0.0 0.0035 16.7 0.0 1.1 1 0 0 1 1 1 1 Kinase-like V_ATPase_I PF01496.19 NODE_81328_length_195_cov_1.250000_g73387_i0forward_frame_1 - 0.098 10.6 2.4 0.1 10.5 2.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Aa_trans PF01490.18 NODE_81321_length_195_cov_1.287500_g73380_i0reverse_frame_1 - 1.1e-06 27.6 3.2 1.2e-06 27.5 3.2 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF4960 PF16324.5 NODE_81319_length_195_cov_1.300000_g73378_i0reverse_frame_1 - 0.25 10.8 0.0 0.25 10.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4960) Hum_adeno_E3A PF05393.11 NODE_81317_length_195_cov_1.312500_g73376_i0forward_frame_1 - 0.0043 17.0 4.4 0.0047 16.9 4.4 1.1 1 0 0 1 1 1 1 Human adenovirus early E3A glycoprotein TMIE PF16038.5 NODE_81317_length_195_cov_1.312500_g73376_i0forward_frame_1 - 0.94 9.4 7.8 1.2 9.0 7.8 1.1 1 0 0 1 1 1 0 TMIE protein DUF4201 PF13870.6 NODE_81306_length_195_cov_1.375000_g73365_i0reverse_frame_1 - 0.0049 16.6 3.9 0.0076 16.0 3.9 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) DUF1664 PF07889.12 NODE_81306_length_195_cov_1.375000_g73365_i0reverse_frame_1 - 0.022 14.8 1.2 0.026 14.5 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) YokU PF14122.6 NODE_81306_length_195_cov_1.375000_g73365_i0reverse_frame_1 - 0.033 14.2 1.1 0.041 13.9 1.1 1.1 1 0 0 1 1 1 0 YokU-like protein, putative antitoxin DUF2746 PF10874.8 NODE_81306_length_195_cov_1.375000_g73365_i0reverse_frame_1 - 0.052 14.0 0.1 0.06 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2746) SBP_bac_3 PF00497.20 NODE_81305_length_195_cov_1.375000_g73364_i0reverse_frame_1 - 0.0035 16.8 0.0 0.0038 16.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 fn2 PF00040.19 NODE_81304_length_195_cov_1.375000_g73363_i0reverse_frame_1 - 0.072 13.4 0.4 0.11 12.8 0.4 1.3 1 0 0 1 1 1 0 Fibronectin type II domain IR1-M PF12185.8 NODE_81304_length_195_cov_1.375000_g73363_i0reverse_frame_1 - 0.08 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Nup358/RanBP2 E3 ligase domain HpaP PF09483.10 NODE_81293_length_195_cov_1.425000_g73352_i0forward_frame_1 - 0.13 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Type III secretion protein (HpaP) Mito_carr PF00153.27 NODE_81274_length_195_cov_1.487500_g73333_i0reverse_frame_1 - 1.6e-06 27.9 0.1 3.7e-06 26.8 0.0 1.6 2 0 0 2 2 2 1 Mitochondrial carrier protein Rota_NS6 PF04866.12 NODE_81273_length_195_cov_1.487500_g73332_i0reverse_frame_1 - 0.12 12.6 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 6 UCH PF00443.29 NODE_81261_length_195_cov_1.500000_g73320_i0reverse_frame_1 - 1.9e-05 24.3 0.0 1.9e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Pox_Ag35 PF03286.14 NODE_81261_length_195_cov_1.500000_g73320_i0reverse_frame_1 - 0.09 12.6 0.1 0.098 12.4 0.1 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein RhoGEF67_u2 PF16614.5 NODE_81241_length_195_cov_1.525000_g73300_i0forward_frame_1 - 0.0053 16.8 0.0 0.0053 16.8 0.0 1.1 1 0 0 1 1 1 1 Unstructured region two on RhoGEF 6 and 7 DUF4218 PF13960.6 NODE_81232_length_195_cov_1.562500_g73291_i0forward_frame_1 - 0.15 11.7 0.2 0.17 11.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4218) SR-25 PF10500.9 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 0.14 11.7 16.1 0.15 11.7 16.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein AP3D1 PF06375.11 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 0.21 11.8 14.6 0.22 11.7 14.6 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 UPF0767 PF15990.5 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 2.2 8.5 5.1 2.8 8.2 5.1 1.1 1 0 0 1 1 1 0 UPF0767 family RNA_polI_A34 PF08208.11 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 2.3 8.3 20.1 2.3 8.3 20.1 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF3464 PF11947.8 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 3.6 7.3 10.4 3.9 7.2 10.4 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Connexin PF00029.19 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 3.9 7.2 7.0 3.9 7.2 7.0 1.0 1 0 0 1 1 1 0 Connexin Peptidase_S49_N PF08496.10 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 3.9 7.5 11.5 4.3 7.4 11.5 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal TSGP1 PF07771.11 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 5 7.3 12.9 6.1 7.0 12.9 1.3 1 0 0 1 1 1 0 Tick salivary peptide group 1 Coilin_N PF15862.5 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 6.9 6.5 16.5 7.6 6.3 16.5 1.1 1 0 0 1 1 1 0 Coilin N-terminus Presenilin PF01080.17 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 7.1 5.3 7.0 7.3 5.2 7.0 1.0 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 8.6 5.5 6.4 8.6 5.5 6.4 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF4131 PF13567.6 NODE_81224_length_195_cov_1.643750_g73283_i0forward_frame_1 - 6.1 6.5 7.8 6 6.5 7.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) FHIPEP PF00771.20 NODE_81217_length_195_cov_1.687500_g73276_i0reverse_frame_1 - 9.8e-06 24.3 0.0 9.8e-06 24.3 0.0 1.0 1 0 0 1 1 1 1 FHIPEP family NifU_N PF01592.16 NODE_81208_length_195_cov_1.750000_g73267_i0reverse_frame_1 - 0.12 12.5 0.9 0.13 12.4 0.9 1.1 1 0 0 1 1 1 0 NifU-like N terminal domain Acetyltransf_1 PF00583.25 NODE_81197_length_195_cov_1.825000_g73256_i0reverse_frame_1 - 5.1e-05 23.5 0.0 5.2e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 NODE_81197_length_195_cov_1.825000_g73256_i0reverse_frame_1 - 0.00028 20.8 0.0 0.00028 20.8 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 NODE_81197_length_195_cov_1.825000_g73256_i0reverse_frame_1 - 0.0037 17.6 0.0 0.0039 17.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 NODE_81197_length_195_cov_1.825000_g73256_i0reverse_frame_1 - 0.004 17.3 0.0 0.0044 17.1 0.0 1.1 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Anoctamin PF04547.12 NODE_81195_length_195_cov_1.825000_g73254_i0reverse_frame_1 - 0.27 10.0 0.6 0.31 9.8 0.6 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel Ac81 PF05820.11 NODE_81195_length_195_cov_1.825000_g73254_i0forward_frame_1 - 4.9 6.7 11.0 5.4 6.5 11.0 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 CoA_trans PF01144.23 NODE_81176_length_195_cov_1.931250_g73235_i0forward_frame_1 - 4.3e-15 55.7 0.0 4.6e-15 55.6 0.0 1.0 1 0 0 1 1 1 1 Coenzyme A transferase HTH_35 PF13693.6 NODE_81176_length_195_cov_1.931250_g73235_i0forward_frame_1 - 0.00065 19.7 0.0 0.00071 19.6 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding FAD_binding_9 PF08021.11 NODE_81167_length_195_cov_1.975000_g73226_i0forward_frame_1 - 0.16 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain LRRCT PF01463.24 NODE_81164_length_195_cov_1.987500_g73223_i0reverse_frame_1 - 0.11 13.1 0.5 0.17 12.5 0.5 1.3 1 0 0 1 1 1 0 Leucine rich repeat C-terminal domain RPA_interact_N PF14766.6 NODE_81164_length_195_cov_1.987500_g73223_i0forward_frame_1 - 0.013 15.1 0.1 0.023 14.3 0.1 1.4 1 0 0 1 1 1 0 Replication protein A interacting N-terminal Macro_2 PF14519.6 NODE_81162_length_195_cov_1.993750_g73221_i0reverse_frame_1 - 0.11 11.8 0.2 0.11 11.8 0.2 1.0 1 0 0 1 1 1 0 Macro-like domain DUF1065 PF06358.11 NODE_81158_length_195_cov_2.000000_g73217_i0reverse_frame_1 - 0.028 14.3 0.0 0.042 13.8 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1065) PRO8NT PF08082.11 NODE_81141_length_195_cov_2.106250_g73200_i0reverse_frame_1 - 0.14 12.1 0.0 0.14 12.1 0.0 1.0 1 0 0 1 1 1 0 PRO8NT (NUC069), PrP8 N-terminal domain DUF5394 PF17372.2 NODE_81120_length_195_cov_2.343750_g73179_i0reverse_frame_1 - 0.094 12.3 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5394) CxC1 PF18802.1 NODE_81114_length_195_cov_2.450000_g73173_i0forward_frame_1 - 0.16 12.1 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases Jun PF03957.13 NODE_81110_length_195_cov_2.531250_g73169_i0forward_frame_1 - 0.022 14.7 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Jun-like transcription factor Zip PF02535.22 NODE_81105_length_195_cov_2.675000_g73164_i0forward_frame_1 - 0.034 13.4 0.1 0.037 13.3 0.1 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter APA3_viroporin PF11289.8 NODE_81099_length_195_cov_2.718750_g73158_i0forward_frame_1 - 0.0067 16.0 4.0 0.007 16.0 4.0 1.0 1 0 0 1 1 1 1 Coronavirus accessory protein 3a GASA PF02704.14 NODE_81093_length_195_cov_2.975000_g73152_i0forward_frame_1 - 0.066 13.4 6.1 0.083 13.0 6.1 1.1 1 0 0 1 1 1 0 Gibberellin regulated protein Trp_Tyr_perm PF03222.13 NODE_81091_length_195_cov_3.081250_g73150_i0reverse_frame_1 - 0.014 14.4 0.5 0.014 14.4 0.5 1.0 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family RCDG1 PF15725.5 NODE_81084_length_195_cov_3.387500_g73143_i0reverse_frame_1 - 0.034 14.6 2.2 0.039 14.4 2.2 1.2 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein DUF2706 PF10913.8 NODE_81076_length_195_cov_5.837500_g73135_i0reverse_frame_1 - 0.09 12.6 0.1 0.22 11.4 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2706) CybS PF05328.12 NODE_81074_length_195_cov_7.212500_g73133_i0reverse_frame_1 - 0.45 10.2 6.8 0.52 10.0 6.8 1.2 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit DUF5423 PF17461.2 NODE_81073_length_195_cov_9.500000_g73132_i0reverse_frame_1 - 0.43 9.4 3.3 0.45 9.3 3.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5423) DHHC PF01529.20 NODE_81073_length_195_cov_9.500000_g73132_i0forward_frame_1 - 0.99 9.5 7.6 1.4 9.0 7.6 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Sid-5 PF17204.3 NODE_81073_length_195_cov_9.500000_g73132_i0forward_frame_1 - 3.1 8.0 9.6 4.7 7.5 9.6 1.4 1 1 0 1 1 1 0 Sid-5 family DUF1589 PF07628.11 NODE_81069_length_195_cov_15.393750_g73128_i0forward_frame_1 - 0.024 14.8 0.1 0.028 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1589) SdpA PF17418.2 NODE_81069_length_195_cov_15.393750_g73128_i0forward_frame_1 - 0.11 12.4 0.0 0.13 12.2 0.0 1.0 1 0 0 1 1 1 0 Sporulation delaying protein SdpA PSI_integrin PF17205.3 NODE_81059_length_195_cov_30.662500_g73118_i0forward_frame_1 - 0.012 15.4 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 Integrin plexin domain DUF3965 PF13112.6 NODE_81055_length_195_cov_36.331250_g73114_i0reverse_frame_1 - 0.19 10.9 0.1 0.23 10.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3965) MACPF PF01823.19 NODE_81052_length_195_cov_38.037500_g73111_i0reverse_frame_1 - 0.052 13.6 4.3 0.056 13.5 4.3 1.0 1 0 0 1 1 1 0 MAC/Perforin domain Imm17 PF15562.6 NODE_81048_length_195_cov_40.287500_g73107_i0reverse_frame_1 - 0.14 12.1 4.3 0.19 11.6 4.3 1.2 1 0 0 1 1 1 0 Immunity protein 17 Arm-DNA-bind_2 PF12167.8 NODE_81040_length_195_cov_44.706250_g73099_i0forward_frame_1 - 0.16 11.9 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Arm DNA-binding domain RE_Eco29kI PF09517.10 NODE_81038_length_195_cov_46.918750_g73097_i0reverse_frame_1 - 0.16 11.6 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Eco29kI restriction endonuclease YjbR PF04237.13 NODE_81038_length_195_cov_46.918750_g73097_i0forward_frame_1 - 0.14 12.7 0.0 0.15 12.6 0.0 1.1 1 0 0 1 1 1 0 YjbR ICAM_N PF03921.14 NODE_81036_length_195_cov_49.537500_g73095_i0forward_frame_1 - 0.037 13.7 0.1 0.046 13.4 0.0 1.3 1 1 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain XRN1_D1 PF18332.1 NODE_81034_length_195_cov_54.393750_g73093_i0reverse_frame_1 - 0.053 13.3 0.0 0.053 13.3 0.0 1.0 1 0 0 1 1 1 0 Exoribonuclease Xrn1 D1 domain Hormone_4 PF00220.17 NODE_81031_length_195_cov_56.081250_g73090_i0reverse_frame_1 - 5.5 7.2 7.2 0.9 9.7 1.6 2.1 2 0 0 2 2 2 0 Neurohypophysial hormones, N-terminal Domain MukF_C PF17193.4 NODE_81025_length_195_cov_61.112500_g73084_i0reverse_frame_1 - 0.057 13.6 0.0 0.072 13.2 0.0 1.3 1 1 0 1 1 1 0 MukF C-terminal domain Rubredoxin_2 PF18073.1 NODE_81024_length_195_cov_62.168750_g73083_i0forward_frame_1 - 0.061 13.1 1.1 0.061 13.1 1.1 1.5 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-B_box PF00643.24 NODE_81022_length_195_cov_63.118750_g73081_i0reverse_frame_1 - 1.9 8.7 8.6 0.66 10.2 2.1 2.1 2 0 0 2 2 2 0 B-box zinc finger DUF1666 PF07891.12 NODE_81010_length_195_cov_94.825000_g73069_i0reverse_frame_1 - 0.024 14.3 0.3 0.027 14.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1666) DUF4037 PF13228.6 NODE_81001_length_195_cov_131.075000_g73060_i0reverse_frame_1 - 0.067 14.0 0.1 0.077 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4037) DUF1685 PF07939.11 NODE_80993_length_195_cov_261.968750_g73052_i0reverse_frame_1 - 0.12 12.1 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) DUF2944 PF11161.8 NODE_80980_length_196_cov_0.906832_g73039_i0forward_frame_2 - 0.049 13.5 0.0 0.056 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) DUF1922 PF09082.10 NODE_80979_length_196_cov_0.913043_g73038_i0reverse_frame_3 - 0.1 12.9 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1922) zf-CCHC_2 PF13696.6 NODE_80978_length_196_cov_0.925466_g73037_i0forward_frame_3 - 0.015 15.1 0.3 0.026 14.3 0.3 1.5 1 0 0 1 1 1 0 Zinc knuckle PAM2 PF07145.15 NODE_80976_length_196_cov_0.931677_g73035_i0reverse_frame_3 - 0.019 14.6 1.4 0.31 10.8 0.2 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region Presenilin PF01080.17 NODE_80973_length_196_cov_0.962733_g73032_i0reverse_frame_2 - 7.6 5.2 7.1 7.6 5.2 7.1 1.0 1 0 0 1 1 1 0 Presenilin Miga PF10265.9 NODE_80973_length_196_cov_0.962733_g73032_i0reverse_frame_2 - 8.1 5.3 13.0 8 5.3 13.0 1.0 1 0 0 1 1 1 0 Mitoguardin APOBEC3 PF18771.1 NODE_80973_length_196_cov_0.962733_g73032_i0forward_frame_3 - 0.24 11.5 1.3 0.27 11.4 1.3 1.1 1 0 0 1 1 1 0 APOBEC3 ACP_syn_III_C PF08541.10 NODE_80972_length_196_cov_0.962733_g73031_i0reverse_frame_3 - 0.024 14.8 0.0 0.027 14.6 0.0 1.2 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Fijivirus_P9-2 PF06837.11 NODE_80971_length_196_cov_0.975155_g73030_i0forward_frame_2 - 1.6 8.1 6.0 1.6 8.1 6.0 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein Imm_superinfect PF14373.6 NODE_80958_length_196_cov_0.987578_g73017_i0forward_frame_3 - 0.05 13.5 0.2 0.073 13.0 0.2 1.2 1 0 0 1 1 1 0 Superinfection immunity protein DUF3270 PF11674.8 NODE_80957_length_196_cov_0.987578_g73016_i0reverse_frame_3 - 0.88 9.8 7.2 0.96 9.7 7.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) SVM_signal PF12113.8 NODE_80957_length_196_cov_0.987578_g73016_i0reverse_frame_3 - 3.5 7.6 5.3 24 4.9 0.3 2.2 2 0 0 2 2 2 0 SVM protein signal sequence Mito_fiss_reg PF05308.11 NODE_80949_length_196_cov_0.987578_g73008_i0reverse_frame_2 - 2.7 8.0 7.4 2.9 7.9 7.4 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 NODE_80949_length_196_cov_0.987578_g73008_i0reverse_frame_2 - 2.8 7.4 8.7 2.9 7.3 8.7 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal VIR_N PF15912.5 NODE_80949_length_196_cov_0.987578_g73008_i0reverse_frame_2 - 4.1 6.9 9.4 4.7 6.7 9.4 1.0 1 0 0 1 1 1 0 Virilizer, N-terminal DUF1360 PF07098.11 NODE_80949_length_196_cov_0.987578_g73008_i0forward_frame_3 - 0.16 12.0 5.8 0.18 11.8 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) Ac81 PF05820.11 NODE_80947_length_196_cov_0.993789_g73006_i0forward_frame_3 - 0.034 13.7 0.1 0.034 13.7 0.1 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 hDGE_amylase PF14701.6 NODE_80943_length_196_cov_0.993789_g73002_i0forward_frame_3 - 4.7e-20 72.1 0.4 3.7e-19 69.2 0.0 1.9 1 1 1 2 2 2 2 Glycogen debranching enzyme, glucanotransferase domain Sugar_tr PF00083.24 NODE_80940_length_196_cov_0.993789_g72999_i0forward_frame_3 - 0.0003 19.8 4.4 0.0003 19.8 4.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_80940_length_196_cov_0.993789_g72999_i0forward_frame_3 - 0.00032 19.7 5.4 0.00033 19.7 5.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1945 PF09178.10 NODE_80940_length_196_cov_0.993789_g72999_i0forward_frame_2 - 0.0092 16.1 1.9 0.019 15.1 1.9 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1945) Syndecan PF01034.20 NODE_80938_length_196_cov_0.993789_g72997_i0reverse_frame_3 - 0.16 11.9 0.6 0.34 10.9 0.0 1.7 2 0 0 2 2 2 0 Syndecan domain F1F0-ATPsyn_F PF10791.9 NODE_80938_length_196_cov_0.993789_g72997_i0reverse_frame_2 - 0.1 13.1 0.2 0.14 12.6 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial F1-F0 ATP synthase subunit F of fungi UBZ_FAAP20 PF15750.5 NODE_80934_length_196_cov_0.993789_g72993_i0reverse_frame_2 - 0.11 12.5 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin-binding zinc-finger PRESAN PF09687.10 NODE_80933_length_196_cov_0.993789_g72992_i0forward_frame_3 - 0.0089 16.6 0.8 0.01 16.4 0.8 1.2 1 0 0 1 1 1 1 Plasmodium RESA N-terminal HJURP_mid PF12346.8 NODE_80930_length_196_cov_0.993789_g72989_i0reverse_frame_2 - 0.018 15.5 4.1 0.021 15.3 4.1 1.0 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat SR-25 PF10500.9 NODE_80930_length_196_cov_0.993789_g72989_i0forward_frame_3 - 0.58 9.7 9.1 0.58 9.7 9.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RSRP PF17069.5 NODE_80930_length_196_cov_0.993789_g72989_i0forward_frame_3 - 0.64 9.5 11.6 0.66 9.5 11.6 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Gon7 PF08738.10 NODE_80922_length_196_cov_0.993789_g72981_i0reverse_frame_3 - 0.096 12.8 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Gon7 family PDZ_4 PF17816.1 NODE_80922_length_196_cov_0.993789_g72981_i0reverse_frame_3 - 0.15 12.5 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 PDZ domain PAN_3 PF08277.12 NODE_80919_length_196_cov_0.993789_g72978_i0reverse_frame_3 - 0.099 12.5 3.5 0.14 12.0 3.5 1.4 1 1 0 1 1 1 0 PAN-like domain PPR_2 PF13041.6 NODE_80917_length_196_cov_0.993789_g72976_i0forward_frame_3 - 0.031 14.5 0.0 0.04 14.1 0.0 1.1 1 0 0 1 1 1 0 PPR repeat family PrpR_N PF06506.11 NODE_80914_length_196_cov_1.024845_g72973_i0forward_frame_3 - 0.23 11.0 0.0 0.28 10.7 0.0 1.0 1 0 0 1 1 1 0 Propionate catabolism activator GPS PF01825.21 NODE_80907_length_196_cov_1.049689_g72966_i0forward_frame_2 - 9.1e-07 29.3 0.1 1.4e-06 28.7 0.1 1.3 1 0 0 1 1 1 1 GPCR proteolysis site, GPS, motif Tra_M PF05261.11 NODE_80897_length_196_cov_1.086957_g72956_i0reverse_frame_3 - 0.0014 18.6 0.5 0.0014 18.6 0.5 1.1 1 0 0 1 1 1 1 TraM protein, DNA-binding OST-HTH PF12872.7 NODE_80896_length_196_cov_1.086957_g72955_i0reverse_frame_2 - 0.012 15.4 0.1 0.014 15.2 0.1 1.2 1 0 0 1 1 1 0 OST-HTH/LOTUS domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks381.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks381.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks381.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks381.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ParBc PF02195.18 NODE_80884_length_196_cov_1.149068_g72943_i0reverse_frame_2 - 0.011 16.0 0.0 0.022 15.0 0.0 1.6 1 1 0 1 1 1 0 ParB-like nuclease domain Glyco_hydro_3_C PF01915.22 NODE_80883_length_196_cov_1.155280_g72942_i0reverse_frame_2 - 0.092 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain Chromosome_seg PF13889.6 NODE_80882_length_196_cov_1.161491_g72941_i0forward_frame_3 - 0.014 15.5 1.9 0.023 14.9 1.9 1.3 1 0 0 1 1 1 0 Chromosome segregation during meiosis Equine_IAV_S2 PF06502.11 NODE_80879_length_196_cov_1.167702_g72938_i0reverse_frame_3 - 0.44 10.7 1.7 0.61 10.2 1.7 1.2 1 0 0 1 1 1 0 Equine infectious anaemia virus S2 protein Lzipper-MIP1 PF14389.6 NODE_80879_length_196_cov_1.167702_g72938_i0reverse_frame_2 - 0.13 12.6 0.2 0.16 12.3 0.2 1.1 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 DUF3136 PF11334.8 NODE_80877_length_196_cov_1.167702_g72936_i0reverse_frame_3 - 0.05 13.4 0.3 0.063 13.1 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) Asp PF00026.23 NODE_80877_length_196_cov_1.167702_g72936_i0forward_frame_2 - 0.058 12.8 0.0 0.061 12.7 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic aspartyl protease T-box PF00907.22 NODE_80875_length_196_cov_1.173913_g72934_i0reverse_frame_3 - 0.24 11.6 0.0 0.34 11.1 0.0 1.2 1 0 0 1 1 1 0 T-box DUF2703 PF10865.8 NODE_80866_length_196_cov_1.198758_g72925_i0reverse_frame_3 - 0.1 12.8 0.1 0.11 12.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) MCM PF00493.23 NODE_80864_length_196_cov_1.204969_g72923_i0reverse_frame_3 - 0.18 10.8 0.0 0.2 10.7 0.0 1.1 1 0 0 1 1 1 0 MCM P-loop domain DUF202 PF02656.15 NODE_80862_length_196_cov_1.217391_g72921_i0reverse_frame_2 - 0.058 13.8 0.1 0.061 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF202) YbgS PF13985.6 NODE_80861_length_196_cov_1.217391_g72920_i0reverse_frame_3 - 0.0077 16.5 2.2 0.0086 16.3 2.2 1.0 1 0 0 1 1 1 1 YbgS-like protein IATP PF04568.12 NODE_80861_length_196_cov_1.217391_g72920_i0reverse_frame_3 - 0.055 13.9 3.6 0.061 13.8 3.6 1.1 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP CxxCxxCC PF03692.15 NODE_80860_length_196_cov_1.217391_g72919_i0reverse_frame_2 - 0.092 13.5 0.1 0.11 13.2 0.1 1.3 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain DUF2087 PF09860.9 NODE_80856_length_196_cov_1.236025_g72915_i0reverse_frame_2 - 0.074 13.2 0.0 0.08 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) OTT_1508_deam PF14441.6 NODE_80854_length_196_cov_1.242236_g72913_i0forward_frame_2 - 0.062 13.3 0.6 0.083 12.9 0.6 1.3 1 1 0 1 1 1 0 OTT_1508-like deaminase DNA_processg_A PF02481.15 NODE_80851_length_196_cov_1.242236_g72910_i0reverse_frame_2 - 0.027 13.7 0.0 0.027 13.7 0.0 1.1 1 0 0 1 1 1 0 DNA recombination-mediator protein A PriCT_1 PF08708.11 NODE_80849_length_196_cov_1.242236_g72908_i0reverse_frame_3 - 0.051 13.3 0.1 0.057 13.2 0.1 1.1 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) DUF1510 PF07423.11 NODE_80848_length_196_cov_1.248447_g72907_i0forward_frame_2 - 0.077 13.2 0.0 0.099 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1510) HPD PF05044.12 NODE_80847_length_196_cov_1.260870_g72906_i0forward_frame_2 - 0.08 12.8 0.1 0.099 12.5 0.1 1.1 1 0 0 1 1 1 0 Homeo-prospero domain ABA_GPCR PF12430.8 NODE_80842_length_196_cov_1.291925_g72901_i0reverse_frame_3 - 0.017 14.9 0.0 0.02 14.7 0.0 1.0 1 0 0 1 1 1 0 Abscisic acid G-protein coupled receptor DUF2183 PF09949.9 NODE_80842_length_196_cov_1.291925_g72901_i0reverse_frame_3 - 0.025 14.9 0.1 0.028 14.8 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2183) Mtp PF03821.16 NODE_80842_length_196_cov_1.291925_g72901_i0reverse_frame_2 - 0.14 11.8 0.6 0.14 11.7 0.6 1.1 1 0 0 1 1 1 0 Golgi 4-transmembrane spanning transporter Peptidase_C8 PF03569.13 NODE_80841_length_196_cov_1.298137_g72900_i0forward_frame_2 - 0.013 15.1 0.1 0.014 15.0 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C8 DUF3599 PF12206.8 NODE_80838_length_196_cov_1.304348_g72897_i0forward_frame_3 - 0.14 12.6 0.0 0.15 12.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3599) Thioredoxin PF00085.20 NODE_80837_length_196_cov_1.310559_g72896_i0forward_frame_3 - 5.4e-06 26.3 0.0 6.3e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 NODE_80837_length_196_cov_1.310559_g72896_i0forward_frame_3 - 0.0025 18.2 0.0 0.0032 17.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Microcin PF03526.13 NODE_80835_length_196_cov_1.322981_g72894_i0reverse_frame_3 - 0.0019 18.0 2.0 0.0026 17.5 1.7 1.4 1 1 0 1 1 1 1 Colicin E1 (microcin) immunity protein FF PF01846.19 NODE_80835_length_196_cov_1.322981_g72894_i0forward_frame_3 - 0.022 14.9 0.3 0.028 14.6 0.3 1.1 1 0 0 1 1 1 0 FF domain UL42 PF17638.2 NODE_80831_length_196_cov_1.341615_g72890_i0reverse_frame_3 - 0.027 14.4 0.5 0.029 14.3 0.5 1.1 1 0 0 1 1 1 0 HCMV UL42 MIT_C PF16565.5 NODE_80830_length_196_cov_1.347826_g72889_i0reverse_frame_2 - 0.011 15.7 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT cNMP_binding PF00027.29 NODE_80830_length_196_cov_1.347826_g72889_i0reverse_frame_2 - 0.05 13.7 0.0 0.058 13.5 0.0 1.2 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Beta_helix_2 PF18835.1 NODE_80830_length_196_cov_1.347826_g72889_i0forward_frame_3 - 0.099 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Beta helix repeat of Inulin fructotransferase CobU PF02283.16 NODE_80826_length_196_cov_1.378882_g72885_i0reverse_frame_2 - 0.018 14.7 0.2 0.021 14.4 0.2 1.1 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase SNARE PF05739.19 NODE_80826_length_196_cov_1.378882_g72885_i0reverse_frame_2 - 0.079 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 SNARE domain MscL PF01741.18 NODE_80825_length_196_cov_1.378882_g72884_i0reverse_frame_3 - 0.0059 16.9 0.2 0.0061 16.8 0.2 1.1 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL Ion_trans PF00520.31 NODE_80825_length_196_cov_1.378882_g72884_i0reverse_frame_3 - 0.013 14.7 0.5 0.013 14.7 0.5 1.1 1 0 0 1 1 1 0 Ion transport protein DUF2177 PF09945.9 NODE_80825_length_196_cov_1.378882_g72884_i0reverse_frame_3 - 0.049 13.7 0.2 0.051 13.7 0.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2177) Saf_2TM PF18303.1 NODE_80825_length_196_cov_1.378882_g72884_i0reverse_frame_3 - 0.082 12.5 0.4 0.094 12.3 0.4 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain CAP160 PF07918.11 NODE_80824_length_196_cov_1.391304_g72883_i0reverse_frame_2 - 0.19 11.5 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 CAP160 repeat MAPKK1_Int PF08923.10 NODE_80818_length_196_cov_1.416149_g72877_i0forward_frame_3 - 0.048 13.5 0.1 0.048 13.5 0.1 1.1 1 0 0 1 1 1 0 Mitogen-activated protein kinase kinase 1 interacting zf-C3HC4_3 PF13920.6 NODE_80814_length_196_cov_1.440994_g72873_i0reverse_frame_2 - 1.7 8.5 14.4 6.5 6.7 9.8 2.4 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) KOG2701 PF09762.9 NODE_80810_length_196_cov_1.447205_g72869_i0reverse_frame_3 - 0.027 14.7 0.0 0.029 14.6 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein (DUF2037) Kp4 PF09044.10 NODE_80810_length_196_cov_1.447205_g72869_i0forward_frame_2 - 0.068 13.2 0.1 0.078 13.1 0.1 1.1 1 0 0 1 1 1 0 Kp4 MipZ PF09140.11 NODE_80810_length_196_cov_1.447205_g72869_i0forward_frame_2 - 0.095 12.0 0.0 0.095 12.0 0.0 1.0 1 0 0 1 1 1 0 ATPase MipZ GATase_7 PF13537.6 NODE_80803_length_196_cov_1.459627_g72862_i0reverse_frame_3 - 3.7e-05 23.6 0.0 4.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 NODE_80803_length_196_cov_1.459627_g72862_i0reverse_frame_3 - 0.015 15.5 0.0 0.019 15.2 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferase domain GYF_2 PF14237.6 NODE_80802_length_196_cov_1.465839_g72861_i0reverse_frame_3 - 0.043 13.6 0.0 0.069 13.0 0.0 1.3 1 0 0 1 1 1 0 GYF domain 2 TruB_C_2 PF16198.5 NODE_80796_length_196_cov_1.478261_g72855_i0forward_frame_2 - 0.12 12.6 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 tRNA pseudouridylate synthase B C-terminal domain TetR_C_31 PF17940.1 NODE_80795_length_196_cov_1.478261_g72854_i0forward_frame_2 - 0.033 14.4 4.2 0.037 14.2 4.2 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain RRM_3 PF08777.11 NODE_80795_length_196_cov_1.478261_g72854_i0forward_frame_2 - 0.097 12.7 1.1 0.11 12.5 1.1 1.0 1 0 0 1 1 1 0 RNA binding motif DAO PF01266.24 NODE_80791_length_196_cov_1.484472_g72850_i0forward_frame_3 - 0.022 14.4 0.0 0.022 14.4 0.0 1.0 1 0 0 1 1 1 0 FAD dependent oxidoreductase mRNA_decap_C PF16741.5 NODE_80784_length_196_cov_1.484472_g72843_i0reverse_frame_3 - 0.0091 15.3 0.2 0.025 13.9 0.0 1.7 2 0 0 2 2 2 1 mRNA-decapping enzyme C-terminus DUF285 PF03382.14 NODE_80784_length_196_cov_1.484472_g72843_i0reverse_frame_3 - 0.035 13.9 0.0 0.036 13.8 0.0 1.2 1 1 0 1 1 1 0 Mycoplasma protein of unknown function, DUF285 Acylphosphatase PF00708.18 NODE_80781_length_196_cov_1.484472_g72840_i0forward_frame_2 - 1.7e-09 38.0 0.0 1.9e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Acylphosphatase RNA_pol_Rpb2_1 PF04563.15 NODE_80778_length_196_cov_1.490683_g72837_i0forward_frame_3 - 0.13 11.8 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase beta subunit DUF1955 PF09205.10 NODE_80777_length_196_cov_1.490683_g72836_i0forward_frame_3 - 0.076 12.8 0.0 0.079 12.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) PDEase_I PF00233.19 NODE_80775_length_196_cov_1.490683_g72834_i0forward_frame_2 - 0.0014 18.4 0.0 0.0018 18.1 0.0 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase DUF423 PF04241.15 NODE_80774_length_196_cov_1.490683_g72833_i0forward_frame_3 - 0.078 13.2 0.0 0.079 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF423) Tme5_EGF_like PF09064.10 NODE_80772_length_196_cov_1.490683_g72831_i0forward_frame_2 - 2.6 8.0 9.1 0.7 9.8 4.8 2.0 2 0 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like Pterin_bind PF00809.22 NODE_80769_length_196_cov_1.490683_g72828_i0reverse_frame_3 - 0.00084 19.1 1.2 0.085 12.5 0.1 2.0 1 1 1 2 2 2 2 Pterin binding enzyme Babuvirus_MP PF07234.11 NODE_80766_length_196_cov_1.490683_g72825_i0reverse_frame_2 - 0.39 10.9 2.3 0.39 10.9 2.3 1.2 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF4907 PF16250.5 NODE_80755_length_196_cov_1.521739_g72814_i0reverse_frame_2 - 0.12 12.2 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4907) ABC_tran PF00005.27 NODE_80751_length_196_cov_1.540373_g72810_i0reverse_frame_2 - 0.044 14.3 0.0 0.056 14.0 0.0 1.1 1 0 0 1 1 1 0 ABC transporter Macoilin PF09726.9 NODE_80748_length_196_cov_1.559006_g72807_i0reverse_frame_3 - 0.039 12.5 0.6 0.039 12.5 0.6 1.0 1 0 0 1 1 1 0 Macoilin family YidD PF01809.18 NODE_80747_length_196_cov_1.559006_g72806_i0forward_frame_2 - 0.057 13.3 0.2 0.078 12.9 0.2 1.2 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor DUF4687 PF15747.5 NODE_80741_length_196_cov_1.602484_g72800_i0reverse_frame_2 - 0.027 15.0 1.2 0.029 14.9 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4687) Kelch_4 PF13418.6 NODE_80733_length_196_cov_1.621118_g72792_i0forward_frame_3 - 0.073 13.1 0.1 0.092 12.8 0.1 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain UCH PF00443.29 NODE_80727_length_196_cov_1.645963_g72786_i0forward_frame_3 - 0.029 13.8 0.0 0.029 13.8 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Oxidored_q4 PF00507.19 NODE_80725_length_196_cov_1.658385_g72784_i0reverse_frame_3 - 0.0015 18.6 0.9 0.0044 17.1 0.1 1.8 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LapA_dom PF06305.11 NODE_80725_length_196_cov_1.658385_g72784_i0reverse_frame_3 - 0.012 15.5 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain YrvL PF14184.6 NODE_80725_length_196_cov_1.658385_g72784_i0reverse_frame_3 - 0.023 14.8 0.1 0.025 14.7 0.1 1.0 1 0 0 1 1 1 0 Regulatory protein YrvL TT_ORF1 PF02956.14 NODE_80716_length_196_cov_1.726708_g72775_i0reverse_frame_2 - 8.6 4.9 6.8 7.4 5.1 6.8 1.0 1 0 0 1 1 1 0 TT viral orf 1 Acetyltransf_15 PF17013.5 NODE_80715_length_196_cov_1.726708_g72774_i0reverse_frame_2 - 0.39 10.1 3.9 0.41 10.1 3.9 1.0 1 0 0 1 1 1 0 Putative acetyl-transferase WD40 PF00400.32 NODE_80714_length_196_cov_1.732919_g72773_i0forward_frame_2 - 1.3e-07 32.2 0.0 4.2e-06 27.4 0.0 2.0 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_80714_length_196_cov_1.732919_g72773_i0forward_frame_2 - 0.01 16.1 0.0 0.047 14.0 0.0 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 NODE_80714_length_196_cov_1.732919_g72773_i0forward_frame_2 - 0.089 11.4 0.0 0.089 11.4 0.0 1.0 1 0 0 1 1 1 0 Nucleoporin Nup120/160 Bac_DnaA PF00308.18 NODE_80711_length_196_cov_1.732919_g72770_i0forward_frame_3 - 1.2e-11 44.9 0.1 1.3e-11 44.8 0.1 1.0 1 0 0 1 1 1 1 Bacterial dnaA protein DUF892 PF05974.12 NODE_80701_length_196_cov_1.776398_g72760_i0reverse_frame_3 - 1.5e-15 57.6 1.8 1.6e-15 57.5 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) CLLAC PF15675.5 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_3 - 0.073 12.6 1.8 0.11 12.1 1.8 1.2 1 0 0 1 1 1 0 CLLAC-motif containing domain Uroplakin_II PF07353.12 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_3 - 0.11 12.0 0.1 0.12 11.9 0.1 1.0 1 0 0 1 1 1 0 Uroplakin II TMEM100 PF16311.5 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_2 - 0.00048 19.7 1.7 0.00054 19.6 1.7 1.0 1 0 0 1 1 1 1 Transmembrane protein 100 UPF0542 PF15086.6 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_2 - 0.015 15.2 1.1 0.021 14.7 1.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 LapA_dom PF06305.11 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_2 - 0.86 9.5 4.3 1.8 8.5 4.3 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF4094 PF13334.6 NODE_80698_length_196_cov_1.801242_g72757_i0forward_frame_3 - 0.096 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) CcmH PF03918.14 NODE_80698_length_196_cov_1.801242_g72757_i0forward_frame_2 - 0.11 11.8 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein Lep_receptor_Ig PF06328.11 NODE_80695_length_196_cov_1.826087_g72754_i0reverse_frame_3 - 0.089 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain Pkinase PF00069.25 NODE_80694_length_196_cov_1.826087_g72753_i0forward_frame_3 - 1.1e-05 24.9 0.0 1.1e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_80694_length_196_cov_1.826087_g72753_i0forward_frame_3 - 4.7e-05 22.8 0.0 4.7e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_80694_length_196_cov_1.826087_g72753_i0forward_frame_3 - 0.00066 19.1 0.0 0.00066 19.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Usher PF00577.20 NODE_80692_length_196_cov_1.850932_g72751_i0reverse_frame_2 - 1.3e-06 27.6 4.1 1.6e-06 27.3 4.1 1.2 1 0 0 1 1 1 1 Outer membrane usher protein Polysacc_deac_2 PF04748.13 NODE_80690_length_196_cov_1.863354_g72749_i0forward_frame_3 - 0.14 11.3 0.0 0.14 11.3 0.0 1.0 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase DUF2282 PF10048.9 NODE_80688_length_196_cov_1.869565_g72747_i0reverse_frame_2 - 0.055 13.5 0.1 0.084 12.9 0.1 1.3 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2282) Spore_III_AF PF09581.10 NODE_80686_length_196_cov_1.881988_g72745_i0reverse_frame_2 - 0.24 11.4 0.5 0.27 11.2 0.5 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) DUF1841 PF08897.11 NODE_80684_length_196_cov_1.894410_g72743_i0forward_frame_3 - 0.16 12.0 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1841) Zn_clus PF00172.18 NODE_80683_length_196_cov_1.906832_g72742_i0reverse_frame_2 - 0.039 14.1 2.0 0.052 13.7 2.0 1.2 1 0 0 1 1 1 0 Fungal Zn(2)-Cys(6) binuclear cluster domain SSL_OB PF09199.10 NODE_80680_length_196_cov_1.913043_g72739_i0forward_frame_3 - 0.037 14.3 0.0 0.041 14.2 0.0 1.1 1 0 0 1 1 1 0 Staphylococcal superantigen-like OB-fold domain SCO1-SenC PF02630.14 NODE_80675_length_196_cov_1.956522_g72734_i0reverse_frame_2 - 0.041 13.8 0.1 0.048 13.6 0.1 1.1 1 0 0 1 1 1 0 SCO1/SenC ATP-synt_ab_C PF00306.27 NODE_80673_length_196_cov_1.956522_g72732_i0reverse_frame_3 - 0.17 12.2 0.1 0.23 11.8 0.1 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta chain, C terminal domain ERGIC_N PF13850.6 NODE_80672_length_196_cov_1.962733_g72731_i0reverse_frame_3 - 0.022 15.1 0.1 0.03 14.7 0.1 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) zf-met PF12874.7 NODE_80672_length_196_cov_1.962733_g72731_i0forward_frame_2 - 0.076 13.4 0.1 0.14 12.6 0.1 1.4 1 0 0 1 1 1 0 Zinc-finger of C2H2 type Pyridoxal_deC PF00282.19 NODE_80670_length_196_cov_1.975155_g72729_i0forward_frame_3 - 0.11 11.2 0.0 0.11 11.2 0.0 1.2 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain Peptidase_M2 PF01401.18 NODE_80667_length_196_cov_1.981366_g72726_i0reverse_frame_2 - 0.077 11.6 0.5 0.083 11.5 0.5 1.0 1 0 0 1 1 1 0 Angiotensin-converting enzyme DUF2198 PF09964.9 NODE_80667_length_196_cov_1.981366_g72726_i0reverse_frame_2 - 0.087 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2198) PhoLip_ATPase_C PF16212.5 NODE_80666_length_196_cov_1.981366_g72725_i0forward_frame_3 - 4.9e-14 52.7 1.1 5.1e-14 52.6 1.1 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Atthog PF18800.1 NODE_80666_length_196_cov_1.981366_g72725_i0forward_frame_3 - 0.016 15.1 0.3 0.019 14.9 0.3 1.0 1 0 0 1 1 1 0 Attenuator of Hedgehog NatB_MDM20 PF09797.9 NODE_80663_length_196_cov_1.987578_g72722_i0reverse_frame_2 - 0.092 11.7 0.1 0.097 11.6 0.1 1.1 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit Pho88 PF10032.9 NODE_80663_length_196_cov_1.987578_g72722_i0forward_frame_3 - 0.0061 15.8 0.3 0.0078 15.5 0.3 1.0 1 0 0 1 1 1 1 Phosphate transport (Pho88) AAA_11 PF13086.6 NODE_80662_length_196_cov_1.987578_g72721_i0reverse_frame_3 - 0.082 12.7 0.8 0.082 12.7 0.8 1.0 1 0 0 1 1 1 0 AAA domain SR-25 PF10500.9 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_3 - 3 7.4 12.2 3.1 7.3 12.2 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_3 - 3.4 8.4 9.4 4.1 8.1 9.4 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein Baculo_11_kDa PF06143.11 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_2 - 0.058 13.0 0.1 0.067 12.8 0.1 1.1 1 0 0 1 1 1 0 Baculovirus 11 kDa family ECSCR PF15820.5 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_2 - 0.091 12.6 0.0 0.099 12.5 0.0 1.0 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator EphA2_TM PF14575.6 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_2 - 0.12 13.3 0.1 0.13 13.1 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ATG27 PF09451.10 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_2 - 0.15 11.9 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Autophagy-related protein 27 TMEM154 PF15102.6 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_2 - 0.16 11.9 0.1 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family Dna2 PF08696.11 NODE_80659_length_196_cov_2.006211_g72718_i0forward_frame_2 - 0.062 13.1 0.3 0.076 12.8 0.3 1.0 1 0 0 1 1 1 0 DNA replication factor Dna2 DHquinase_II PF01220.19 NODE_80655_length_196_cov_2.074534_g72714_i0forward_frame_3 - 3.6e-21 75.3 1.2 3.8e-21 75.2 1.2 1.0 1 0 0 1 1 1 1 Dehydroquinase class II LpxB PF02684.15 NODE_80655_length_196_cov_2.074534_g72714_i0forward_frame_3 - 0.0048 15.8 0.2 0.0053 15.6 0.2 1.0 1 0 0 1 1 1 1 Lipid-A-disaccharide synthetase DUF1744 PF08490.12 NODE_80650_length_196_cov_2.111801_g72709_i0reverse_frame_3 - 0.11 11.1 0.0 0.12 11.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1744) LHC PF00556.20 NODE_80648_length_196_cov_2.130435_g72707_i0forward_frame_3 - 1.3 9.3 7.6 3.7 7.8 0.8 2.2 2 0 0 2 2 2 0 Antenna complex alpha/beta subunit Humanin PF15040.6 NODE_80647_length_196_cov_2.136646_g72706_i0forward_frame_3 - 0.0045 16.4 2.7 0.008 15.6 2.7 1.3 1 0 0 1 1 1 1 Humanin family E1_4HB PF16191.5 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 0.028 14.6 0.2 0.032 14.4 0.2 1.1 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle PKcGMP_CC PF16808.5 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 0.038 13.8 3.5 2.8 7.8 0.1 3.2 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase MinE PF03776.14 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 0.055 13.5 0.8 0.065 13.2 0.7 1.3 1 1 0 1 1 1 0 Septum formation topological specificity factor MinE Pedibin PF08182.11 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 0.65 9.9 5.9 7.7 6.4 0.7 3.1 3 0 0 3 3 3 0 Pedibin/Hym-346 family UPF0242 PF06785.11 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 1.1 9.4 8.8 1.1 9.3 8.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Phage-tail_1 PF09097.10 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.0035 17.2 0.4 0.0053 16.6 0.4 1.3 1 1 0 1 1 1 1 Baseplate structural protein, domain 1 XhlA PF10779.9 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.011 15.9 1.2 0.058 13.6 1.2 2.2 1 1 0 1 1 1 0 Haemolysin XhlA DUF5082 PF16888.5 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.011 16.0 0.8 0.025 14.9 0.6 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF1664 PF07889.12 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.013 15.6 0.6 0.015 15.4 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.018 15.1 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus NPV_P10 PF05531.12 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.031 14.7 1.0 0.09 13.2 0.9 1.8 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein FlaC_arch PF05377.11 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.033 14.6 0.2 0.2 12.1 0.2 2.2 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) TRPM_tetra PF16519.5 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.056 13.5 0.1 0.21 11.7 0.1 1.9 1 1 1 2 2 2 0 Tetramerisation domain of TRPM DUF3563 PF12086.8 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.066 13.0 0.0 0.089 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3563) MscS_porin PF12795.7 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.068 12.7 0.0 0.079 12.5 0.0 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel porin domain End3 PF12761.7 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.074 13.2 0.1 0.089 12.9 0.1 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 Bacillus_HBL PF05791.11 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.078 12.8 0.4 0.085 12.7 0.4 1.0 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) AAA_13 PF13166.6 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.091 11.4 0.2 0.1 11.2 0.2 1.0 1 0 0 1 1 1 0 AAA domain FmiP_Thoc5 PF09766.9 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.16 11.2 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 1-cysPrx_C PF10417.9 NODE_80635_length_196_cov_2.267081_g72694_i0reverse_frame_3 - 2e-05 24.3 0.1 2.5e-05 24.0 0.1 1.2 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Uricase PF01014.18 NODE_80631_length_196_cov_2.304348_g72690_i0forward_frame_3 - 0.11 12.7 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Uricase Peptidase_M3 PF01432.20 NODE_80624_length_196_cov_2.453416_g72683_i0reverse_frame_3 - 0.02 14.2 0.0 0.021 14.1 0.0 1.0 1 0 0 1 1 1 0 Peptidase family M3 DUF4674 PF15719.5 NODE_80623_length_196_cov_2.521739_g72682_i0forward_frame_2 - 0.13 12.3 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4674) SPATA3 PF15662.5 NODE_80621_length_196_cov_2.552795_g72680_i0reverse_frame_2 - 0.023 15.3 1.0 0.028 15.0 1.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family Na_Ca_ex PF01699.24 NODE_80617_length_196_cov_2.577640_g72676_i0reverse_frame_2 - 0.039 13.9 0.5 0.047 13.7 0.5 1.1 1 0 0 1 1 1 0 Sodium/calcium exchanger protein Inhibitor_I42 PF09394.10 NODE_80614_length_196_cov_2.602484_g72673_i0forward_frame_3 - 0.062 13.7 0.0 0.17 12.3 0.0 1.6 1 1 1 2 2 2 0 Chagasin family peptidase inhibitor I42 Sugar_tr PF00083.24 NODE_80606_length_196_cov_2.782609_g72665_i0reverse_frame_3 - 9.7e-09 34.6 0.7 1e-08 34.5 0.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter IQCJ-SCHIP1 PF15157.6 NODE_80603_length_196_cov_2.888199_g72662_i0forward_frame_2 - 0.0093 15.8 0.0 0.01 15.7 0.0 1.0 1 0 0 1 1 1 1 Fusion protein IQCJ-SCHIP1 with IQ-like motif ZapB PF06005.12 NODE_80602_length_196_cov_2.913043_g72661_i0forward_frame_2 - 0.021 15.2 0.2 0.024 15.1 0.2 1.2 1 0 0 1 1 1 0 Cell division protein ZapB TSC22 PF01166.18 NODE_80602_length_196_cov_2.913043_g72661_i0forward_frame_2 - 0.086 13.2 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 TSC-22/dip/bun family Myb_DNA-bind_6 PF13921.6 NODE_80600_length_196_cov_2.993789_g72659_i0reverse_frame_2 - 0.00073 19.7 0.1 0.0011 19.2 0.1 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 NODE_80600_length_196_cov_2.993789_g72659_i0reverse_frame_2 - 0.018 15.2 0.0 0.026 14.7 0.0 1.2 1 0 0 1 1 1 0 Myb-like DNA-binding domain Atg29_N PF18388.1 NODE_80600_length_196_cov_2.993789_g72659_i0reverse_frame_2 - 0.024 14.4 0.3 0.035 13.9 0.3 1.3 1 0 0 1 1 1 0 Atg29 N-terminal domain Poxvirus_B22R_N PF13169.6 NODE_80600_length_196_cov_2.993789_g72659_i0reverse_frame_2 - 0.099 13.1 1.4 0.74 10.3 1.4 2.0 1 1 0 1 1 1 0 Poxvirus B22R protein N-terminal IL3Ra_N PF18611.1 NODE_80599_length_196_cov_3.049689_g72658_i0reverse_frame_3 - 0.081 12.9 1.1 0.08 12.9 1.1 1.1 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain Erg28 PF03694.13 NODE_80599_length_196_cov_3.049689_g72658_i0forward_frame_3 - 0.048 14.1 0.1 0.05 14.0 0.1 1.1 1 0 0 1 1 1 0 Erg28 like protein UreD PF01774.17 NODE_80596_length_196_cov_3.267081_g72655_i0reverse_frame_2 - 0.12 12.3 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 UreD urease accessory protein MDMPI_C PF07398.11 NODE_80596_length_196_cov_3.267081_g72655_i0forward_frame_2 - 0.044 14.7 0.9 0.053 14.4 0.4 1.4 1 1 1 2 2 2 0 MDMPI C-terminal domain MIEAP PF16026.5 NODE_80592_length_196_cov_3.341615_g72651_i0reverse_frame_3 - 0.024 14.9 0.1 0.026 14.8 0.1 1.0 1 0 0 1 1 1 0 Mitochondria-eating protein Myosin_head PF00063.21 NODE_80591_length_196_cov_3.347826_g72650_i0reverse_frame_2 - 1.1e-11 43.8 0.3 1.1e-11 43.7 0.3 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) ArlS_N PF18719.1 NODE_80591_length_196_cov_3.347826_g72650_i0reverse_frame_2 - 0.049 13.8 0.3 0.053 13.7 0.3 1.1 1 0 0 1 1 1 0 ArlS sensor domain ALG3 PF05208.13 NODE_80590_length_196_cov_3.360248_g72649_i0forward_frame_2 - 0.072 12.5 2.9 0.084 12.3 2.9 1.0 1 0 0 1 1 1 0 ALG3 protein DNA_ligase_A_M PF01068.21 NODE_80590_length_196_cov_3.360248_g72649_i0forward_frame_2 - 0.14 11.8 1.0 0.15 11.7 1.0 1.0 1 0 0 1 1 1 0 ATP dependent DNA ligase domain DUF2480 PF10652.9 NODE_80584_length_196_cov_3.900621_g72643_i0reverse_frame_2 - 0.0089 15.9 0.1 0.0091 15.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2480) BON PF04972.17 NODE_80581_length_196_cov_4.664596_g72640_i0reverse_frame_2 - 2.1e-14 53.6 2.7 2.5e-14 53.3 2.7 1.1 1 0 0 1 1 1 1 BON domain Epiglycanin_TR PF05647.11 NODE_80575_length_196_cov_11.819876_g72634_i0reverse_frame_2 - 0.014 15.3 0.0 0.016 15.1 0.0 1.0 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like TruB_C PF09142.11 NODE_80572_length_196_cov_18.770186_g72631_i0reverse_frame_2 - 0.039 13.7 0.0 0.068 13.0 0.0 1.4 1 0 0 1 1 1 0 tRNA Pseudouridine synthase II, C terminal PAP2_3 PF14378.6 NODE_80571_length_196_cov_22.409938_g72630_i0reverse_frame_2 - 0.064 12.9 1.2 0.066 12.9 1.2 1.2 1 0 0 1 1 1 0 PAP2 superfamily PDZ_3 PF17815.1 NODE_80568_length_196_cov_32.776398_g72627_i0reverse_frame_3 - 0.044 13.7 0.1 0.046 13.6 0.1 1.1 1 0 0 1 1 1 0 PDZ domain UPF0728 PF15092.6 NODE_80568_length_196_cov_32.776398_g72627_i0reverse_frame_3 - 0.1 12.4 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 DUF1577 PF07614.11 NODE_80558_length_196_cov_40.031056_g72617_i0forward_frame_2 - 0.066 12.3 0.1 0.066 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1577) Sec23_trunk PF04811.15 NODE_80557_length_196_cov_40.782609_g72616_i0reverse_frame_2 - 8.7e-10 38.6 0.0 8.7e-10 38.6 0.0 1.0 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain DNA_mis_repair PF01119.19 NODE_80556_length_196_cov_41.279503_g72615_i0reverse_frame_3 - 0.13 12.0 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 DNA mismatch repair protein, C-terminal domain DivIC PF04977.15 NODE_80556_length_196_cov_41.279503_g72615_i0forward_frame_2 - 0.16 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Septum formation initiator SSP160 PF06933.11 NODE_80549_length_196_cov_46.807453_g72608_i0reverse_frame_2 - 0.0067 14.7 1.8 0.0067 14.7 1.8 1.0 1 0 0 1 1 1 1 Special lobe-specific silk protein SSP160 DUF3756 PF12581.8 NODE_80545_length_196_cov_49.422360_g72604_i0reverse_frame_3 - 0.13 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3756) WD40 PF00400.32 NODE_80545_length_196_cov_49.422360_g72604_i0forward_frame_3 - 4.8e-05 24.0 0.3 9e-05 23.2 0.1 1.5 2 0 0 2 2 2 1 WD domain, G-beta repeat MRFAP1 PF15155.6 NODE_80541_length_196_cov_63.354037_g72600_i0forward_frame_2 - 0.013 16.0 0.1 0.015 15.8 0.1 1.1 1 0 0 1 1 1 0 MORF4 family-associated protein1 SRP14 PF02290.15 NODE_80539_length_196_cov_67.652174_g72598_i0reverse_frame_2 - 0.18 12.2 9.3 0.23 11.9 9.3 1.1 1 0 0 1 1 1 0 Signal recognition particle 14kD protein SRP9-21 PF05486.12 NODE_80539_length_196_cov_67.652174_g72598_i0reverse_frame_2 - 8.1 6.9 14.2 9.1 6.8 2.4 2.0 1 1 1 2 2 2 0 Signal recognition particle 9 kDa protein (SRP9) DUF1156 PF06634.12 NODE_80538_length_196_cov_67.776398_g72597_i0forward_frame_3 - 0.1 12.7 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1156) Tat PF00539.18 NODE_80537_length_196_cov_68.099379_g72596_i0reverse_frame_3 - 0.067 13.4 2.5 0.16 12.1 2.5 1.7 1 1 0 1 1 1 0 Transactivating regulatory protein (Tat) Sigma70_ECF PF07638.11 NODE_80535_length_196_cov_71.285714_g72594_i0forward_frame_3 - 0.031 14.2 3.7 0.037 13.9 3.7 1.0 1 0 0 1 1 1 0 ECF sigma factor PhnA_Zn_Ribbon PF08274.12 NODE_80534_length_196_cov_71.925466_g72593_i0forward_frame_2 - 0.075 13.0 0.6 0.12 12.4 0.6 1.3 1 0 0 1 1 1 0 PhnA Zinc-Ribbon DUF4812 PF16071.5 NODE_80532_length_196_cov_80.347826_g72591_i0forward_frame_3 - 0.024 14.4 0.3 0.03 14.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4812) S-antigen PF05756.11 NODE_80530_length_196_cov_88.801242_g72589_i0forward_frame_2 - 2.2 8.7 3.2 2.5 8.5 3.2 1.2 1 0 0 1 1 1 0 S-antigen protein DUF525 PF04379.14 NODE_80529_length_196_cov_90.987578_g72588_i0forward_frame_3 - 0.032 14.5 0.2 0.041 14.1 0.2 1.2 1 0 0 1 1 1 0 ApaG domain MHC_II_beta PF00969.19 NODE_80529_length_196_cov_90.987578_g72588_i0forward_frame_2 - 0.01 15.9 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 0 Class II histocompatibility antigen, beta domain DUF4494 PF14902.6 NODE_80527_length_196_cov_103.577640_g72586_i0reverse_frame_2 - 0.0023 17.8 0.8 0.0024 17.7 0.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4494) Adipokin_hormo PF06377.11 NODE_80522_length_196_cov_135.726708_g72581_i0forward_frame_2 - 0.17 12.3 0.0 0.25 11.7 0.0 1.2 1 0 0 1 1 1 0 Adipokinetic hormone UPF0731 PF14982.6 NODE_80517_length_196_cov_221.428571_g72576_i0forward_frame_3 - 0.045 13.9 0.1 0.68 10.1 0.0 1.9 1 1 1 2 2 2 0 UPF0731 family ATP-synt_Eps PF04627.13 NODE_80509_length_196_cov_95943.223602_g72568_i0reverse_frame_3 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase epsilon chain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks382.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks382.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks382.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks382.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:28:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- eIF3_subunit PF08597.10 NODE_80507_length_196_cov_144204.012422_g72566_i0forward_frame_2 - 0.027 14.4 1.5 0.035 14.0 1.5 1.0 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Lamprin PF06403.11 NODE_80502_length_197_cov_0.858025_g72561_i0forward_frame_2 - 2.2 8.2 12.3 3.4 7.6 12.3 1.4 1 1 0 1 1 1 0 Lamprin PUL PF08324.11 NODE_80498_length_197_cov_0.919753_g72557_i0forward_frame_2 - 0.058 12.6 0.0 0.062 12.5 0.0 1.0 1 0 0 1 1 1 0 PUL domain Sec20 PF03908.13 NODE_80497_length_197_cov_0.925926_g72556_i0reverse_frame_3 - 0.062 13.2 0.7 0.063 13.2 0.7 1.1 1 0 0 1 1 1 0 Sec20 Cadherin_2 PF08266.12 NODE_80492_length_197_cov_0.950617_g72551_i0forward_frame_3 - 0.16 11.8 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Cadherin-like Rsm1 PF08600.10 NODE_80489_length_197_cov_0.969136_g72548_i0reverse_frame_3 - 0.064 13.4 0.4 0.077 13.2 0.4 1.1 1 0 0 1 1 1 0 Rsm1-like PP_kinase_C PF13090.6 NODE_80485_length_197_cov_0.975309_g72544_i0reverse_frame_2 - 0.13 11.8 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain 2 Viral_Beta_CD PF04530.12 NODE_80469_length_197_cov_0.987654_g72528_i0reverse_frame_2 - 0.04 14.2 0.0 0.044 14.1 0.0 1.1 1 0 0 1 1 1 0 Viral Beta C/D like family DUF1980 PF09323.10 NODE_80469_length_197_cov_0.987654_g72528_i0reverse_frame_2 - 0.19 11.6 0.3 0.19 11.6 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) MAP17 PF15807.5 NODE_80469_length_197_cov_0.987654_g72528_i0forward_frame_3 - 0.092 13.0 0.3 0.11 12.8 0.3 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Nucleos_tra2_N PF01773.20 NODE_80469_length_197_cov_0.987654_g72528_i0forward_frame_3 - 0.12 13.0 0.1 0.15 12.7 0.1 1.2 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter N-terminus Lamprin PF06403.11 NODE_80461_length_197_cov_0.987654_g72520_i0forward_frame_3 - 0.071 13.1 0.9 0.081 12.9 0.9 1.1 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_80459_length_197_cov_0.987654_g72518_i0reverse_frame_2 - 0.0096 15.9 0.1 0.0096 15.9 0.1 1.1 1 0 0 1 1 1 1 Lamprin NUC153 PF08159.12 NODE_80454_length_197_cov_0.987654_g72513_i0forward_frame_3 - 0.033 14.0 0.8 0.05 13.4 0.8 1.2 1 0 0 1 1 1 0 NUC153 domain Exop_C PF18559.1 NODE_80453_length_197_cov_0.987654_g72512_i0forward_frame_3 - 0.1 12.5 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Galactose-binding domain-like Herpes_LMP2 PF07415.11 NODE_80451_length_197_cov_0.987654_g72510_i0forward_frame_3 - 0.23 10.2 0.0 0.24 10.1 0.0 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein TPK_B1_binding PF04265.14 NODE_80441_length_197_cov_0.987654_g72500_i0reverse_frame_2 - 0.1 12.3 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain DUF2031 PF09592.10 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.0026 17.3 5.8 0.0027 17.3 5.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2031) Jnk-SapK_ap_N PF09744.9 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.018 15.3 5.6 0.021 15.0 5.6 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 RPA_interact_C PF14768.6 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.055 14.0 0.3 0.067 13.8 0.3 1.2 1 0 0 1 1 1 0 Replication protein A interacting C-terminal DUF1043 PF06295.12 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.11 12.5 3.8 0.14 12.1 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) UPF0242 PF06785.11 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.2 11.7 6.2 0.24 11.5 6.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF724 PF05266.14 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.25 11.1 6.0 0.26 11.1 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Mvb12 PF09452.10 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.26 11.7 3.6 4.5 7.8 0.2 2.0 1 1 1 2 2 2 0 ESCRT-I subunit Mvb12 Spc24 PF08286.11 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.35 11.1 5.9 2.1 8.6 2.3 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DivIC PF04977.15 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.42 10.4 4.8 0.61 9.9 4.1 1.7 1 1 0 1 1 1 0 Septum formation initiator CHD5 PF04420.14 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.45 10.4 5.0 0.54 10.1 3.9 1.6 1 1 0 1 1 1 0 CHD5-like protein DUF2120 PF09893.9 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.47 10.6 3.6 9.9 6.3 0.3 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) TMPIT PF07851.13 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 1.2 8.3 5.2 1.3 8.2 5.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein SLC3A2_N PF16028.5 NODE_80432_length_197_cov_0.987654_g72491_i0reverse_frame_3 - 0.22 11.1 0.9 8.3 6.0 0.2 2.1 1 1 1 2 2 2 0 Solute carrier family 3 member 2 N-terminus His_Phos_2 PF00328.22 NODE_80432_length_197_cov_0.987654_g72491_i0reverse_frame_2 - 0.17 11.2 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) DUF2256 PF10013.9 NODE_80424_length_197_cov_1.055556_g72483_i0forward_frame_2 - 0.029 14.5 0.4 0.039 14.1 0.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) SH3_12 PF18129.1 NODE_80423_length_197_cov_1.061728_g72482_i0forward_frame_2 - 0.094 12.8 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Xrn1 SH3-like domain DUF3871 PF12987.7 NODE_80422_length_197_cov_1.067901_g72481_i0forward_frame_2 - 0.22 10.3 0.0 0.25 10.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3871) Collagen_bind PF05737.12 NODE_80421_length_197_cov_1.074074_g72480_i0reverse_frame_2 - 0.081 13.1 0.1 0.089 13.0 0.1 1.0 1 0 0 1 1 1 0 Collagen binding domain SR-25 PF10500.9 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.006 16.2 8.3 0.006 16.2 8.3 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein DUF4647 PF15504.6 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.029 13.5 3.8 0.031 13.4 3.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4647) Med19 PF10278.9 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.1 12.5 14.7 0.11 12.4 14.7 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 NPR3 PF03666.13 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.28 9.9 6.0 0.32 9.7 6.0 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Connexin PF00029.19 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.5 10.1 3.4 0.49 10.1 3.4 1.0 1 0 0 1 1 1 0 Connexin Peptidase_S49_N PF08496.10 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.61 10.1 7.3 0.65 10.1 7.3 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Conotoxin PF02950.17 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 1 10.5 5.9 1.3 10.1 5.9 1.2 1 0 0 1 1 1 0 Conotoxin Ferlin_C PF16165.5 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 3.2 7.7 8.1 3.8 7.5 8.1 1.2 1 0 0 1 1 1 0 Ferlin C-terminus RNA_pol_Rpc4 PF05132.14 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 6.9 7.1 9.7 8.1 6.9 9.7 1.0 1 0 0 1 1 1 0 RNA polymerase III RPC4 SspB PF04386.13 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 9.6 6.1 7.9 10 6.0 7.9 1.1 1 0 0 1 1 1 0 Stringent starvation protein B m04gp34like PF12216.8 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_2 - 0.047 13.3 0.0 0.048 13.2 0.0 1.0 1 0 0 1 1 1 0 Immune evasion protein DUF4349 PF14257.6 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_2 - 0.074 12.5 1.2 0.074 12.5 1.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF2070 PF09843.9 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_2 - 0.37 9.0 1.7 0.38 9.0 1.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2207 PF09972.9 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_2 - 0.63 8.7 1.1 0.65 8.7 1.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ribosomal_L35p PF01632.19 NODE_80416_length_197_cov_1.104938_g72475_i0forward_frame_2 - 0.0018 18.7 1.3 0.0022 18.4 1.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L35 DUF5432 PF17497.2 NODE_80416_length_197_cov_1.104938_g72475_i0forward_frame_2 - 0.2 11.8 0.4 17 5.6 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5432) Tail_tube PF10618.9 NODE_80415_length_197_cov_1.123457_g72474_i0reverse_frame_3 - 0.13 12.1 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Phage tail tube protein DsbD_2 PF13386.6 NODE_80412_length_197_cov_1.148148_g72471_i0forward_frame_2 - 0.036 14.0 0.0 0.037 13.9 0.0 1.0 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region TMEM247 PF15444.6 NODE_80409_length_197_cov_1.160494_g72468_i0forward_frame_3 - 8.3 6.4 5.9 9.6 6.2 5.9 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 DUF4412 PF14371.6 NODE_80399_length_197_cov_1.191358_g72458_i0reverse_frame_2 - 0.0038 17.0 0.0 0.0039 17.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4412) DUF5544 PF17698.1 NODE_80398_length_197_cov_1.197531_g72457_i0reverse_frame_3 - 0.05 13.7 0.1 0.054 13.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5544) LCCL PF03815.19 NODE_80398_length_197_cov_1.197531_g72457_i0reverse_frame_3 - 0.066 13.3 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 LCCL domain Dicty_CTDC PF00526.18 NODE_80395_length_197_cov_1.216049_g72454_i0reverse_frame_3 - 0.018 14.9 1.4 0.018 14.9 1.4 1.6 2 0 0 2 2 2 0 Dictyostelium (slime mold) repeat PP2C PF00481.21 NODE_80395_length_197_cov_1.216049_g72454_i0forward_frame_2 - 0.00051 19.8 0.0 0.00058 19.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Ank_5 PF13857.6 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 3.9e-10 39.8 0.0 9.2e-06 25.8 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 1.1e-07 32.3 0.0 1.5e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 1.2e-06 28.4 0.0 0.082 13.5 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 1.5e-06 28.7 0.0 3.2e-06 27.6 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 0.0097 16.3 0.0 0.65 10.5 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat DUF5593 PF18007.1 NODE_80383_length_197_cov_1.234568_g72442_i0forward_frame_3 - 0.12 13.1 0.0 0.13 12.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5593) CYSTM PF12734.7 NODE_80379_length_197_cov_1.246914_g72438_i0forward_frame_2 - 6 7.3 23.5 11 6.4 23.4 1.6 1 1 0 1 1 1 0 Cysteine-rich TM module stress tolerance Ribosomal_L30_N PF08079.12 NODE_80376_length_197_cov_1.290123_g72435_i0forward_frame_2 - 0.0053 17.0 1.1 0.0072 16.6 1.1 1.1 1 0 0 1 1 1 1 Ribosomal L30 N-terminal domain Albumin_I PF08027.11 NODE_80372_length_197_cov_1.314815_g72431_i0forward_frame_3 - 0.87 9.3 4.3 8.2 6.1 0.1 2.2 2 0 0 2 2 2 0 Albumin I chain b zf-HC5HC2H_2 PF13832.6 NODE_80371_length_197_cov_1.314815_g72430_i0reverse_frame_3 - 0.077 13.2 0.3 0.081 13.1 0.3 1.1 1 0 0 1 1 1 0 PHD-zinc-finger like domain C1_1 PF00130.22 NODE_80369_length_197_cov_1.333333_g72428_i0reverse_frame_3 - 0.16 11.9 3.7 0.2 11.6 3.7 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) m04gp34like PF12216.8 NODE_80368_length_197_cov_1.339506_g72427_i0reverse_frame_3 - 0.1 12.2 0.2 0.11 12.0 0.2 1.0 1 0 0 1 1 1 0 Immune evasion protein Mucin PF01456.17 NODE_80368_length_197_cov_1.339506_g72427_i0reverse_frame_2 - 0.18 11.8 6.6 0.2 11.6 6.6 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein Myb_DNA-binding PF00249.31 NODE_80363_length_197_cov_1.358025_g72422_i0reverse_frame_2 - 0.013 15.7 0.1 0.018 15.2 0.1 1.4 1 0 0 1 1 1 0 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_80363_length_197_cov_1.358025_g72422_i0reverse_frame_2 - 0.015 15.5 0.1 0.021 15.1 0.1 1.3 1 0 0 1 1 1 0 Myb-like DNA-binding domain Histone_H2A_C PF16211.5 NODE_80362_length_197_cov_1.358025_g72421_i0forward_frame_2 - 0.061 13.1 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Sugar_tr PF00083.24 NODE_80360_length_197_cov_1.370370_g72419_i0reverse_frame_3 - 0.0035 16.3 0.0 0.0035 16.2 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Toxin_4 PF00706.17 NODE_80358_length_197_cov_1.382716_g72417_i0reverse_frame_2 - 0.029 14.8 0.3 0.054 13.9 0.3 1.5 1 1 0 1 1 1 0 Anenome neurotoxin DUF4441 PF14536.6 NODE_80355_length_197_cov_1.388889_g72414_i0reverse_frame_2 - 0.009 16.2 0.7 0.011 15.9 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4441) Luteo_PO PF04662.13 NODE_80354_length_197_cov_1.401235_g72413_i0reverse_frame_3 - 0.0043 16.7 0.0 0.0046 16.7 0.0 1.0 1 0 0 1 1 1 1 Luteovirus P0 protein DUF1149 PF06619.11 NODE_80353_length_197_cov_1.401235_g72412_i0forward_frame_3 - 0.029 14.7 0.0 0.035 14.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1149) MotB_plug PF13677.6 NODE_80352_length_197_cov_1.407407_g72411_i0forward_frame_3 - 0.0087 15.6 1.1 0.011 15.3 1.1 1.2 1 0 0 1 1 1 1 Membrane MotB of proton-channel complex MotA/MotB DUF945 PF06097.11 NODE_80339_length_197_cov_1.462963_g72398_i0reverse_frame_3 - 0.058 12.5 1.5 0.061 12.4 1.5 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF945) PgaD PF13994.6 NODE_80338_length_197_cov_1.462963_g72397_i0reverse_frame_3 - 0.085 12.9 3.0 0.1 12.7 3.0 1.0 1 0 0 1 1 1 0 PgaD-like protein L_HMGIC_fpl PF10242.9 NODE_80338_length_197_cov_1.462963_g72397_i0reverse_frame_2 - 9.7 6.4 11.0 12 6.1 11.0 1.0 1 0 0 1 1 1 0 Lipoma HMGIC fusion partner-like protein MA3 PF02847.17 NODE_80338_length_197_cov_1.462963_g72397_i0forward_frame_2 - 0.0021 18.1 2.0 0.0024 17.8 2.0 1.0 1 0 0 1 1 1 1 MA3 domain PriC PF07445.12 NODE_80338_length_197_cov_1.462963_g72397_i0forward_frame_2 - 0.013 15.4 7.5 0.014 15.3 7.5 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC DUF1104 PF06518.11 NODE_80338_length_197_cov_1.462963_g72397_i0forward_frame_2 - 0.28 11.6 6.0 0.31 11.5 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) ARD PF03079.14 NODE_80338_length_197_cov_1.462963_g72397_i0forward_frame_2 - 0.38 10.9 5.7 0.42 10.8 5.7 1.0 1 0 0 1 1 1 0 ARD/ARD' family zf-LYAR PF08790.11 NODE_80329_length_197_cov_1.475309_g72388_i0forward_frame_3 - 0.09 12.7 1.9 0.18 11.7 1.9 1.5 1 0 0 1 1 1 0 LYAR-type C2HC zinc finger CAAD PF14159.6 NODE_80328_length_197_cov_1.475309_g72387_i0forward_frame_3 - 0.28 11.1 0.9 1.4 8.9 0.1 1.9 1 1 1 2 2 2 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DNA_ligase_A_M PF01068.21 NODE_80326_length_197_cov_1.475309_g72385_i0forward_frame_2 - 3.6e-12 46.4 0.1 3.8e-12 46.3 0.1 1.0 1 0 0 1 1 1 1 ATP dependent DNA ligase domain GldM_N PF12081.8 NODE_80325_length_197_cov_1.475309_g72384_i0forward_frame_3 - 0.099 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 GldM N-terminal domain Pkinase PF00069.25 NODE_80320_length_197_cov_1.475309_g72379_i0forward_frame_3 - 4.3e-12 46.0 0.6 4.5e-12 45.9 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_80320_length_197_cov_1.475309_g72379_i0forward_frame_3 - 0.00038 19.8 0.4 0.00038 19.8 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3622 PF12286.8 NODE_80320_length_197_cov_1.475309_g72379_i0forward_frame_3 - 0.069 13.5 0.2 0.092 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3622) ParB PF08775.10 NODE_80317_length_197_cov_1.481481_g72376_i0forward_frame_3 - 0.048 14.1 4.4 0.052 14.0 4.4 1.1 1 0 0 1 1 1 0 ParB family Gag_p12 PF01141.18 NODE_80312_length_197_cov_1.481481_g72371_i0reverse_frame_2 - 0.068 13.5 0.3 0.076 13.4 0.3 1.1 1 0 0 1 1 1 0 Gag polyprotein, inner coat protein p12 DUF1307 PF06998.11 NODE_80310_length_197_cov_1.481481_g72369_i0reverse_frame_3 - 0.029 14.4 0.2 0.032 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) C8 PF08742.11 NODE_80309_length_197_cov_1.500000_g72368_i0forward_frame_3 - 0.043 14.2 0.2 0.069 13.6 0.2 1.3 1 1 0 1 1 1 0 C8 domain DNAJ_related PF12339.8 NODE_80308_length_197_cov_1.500000_g72367_i0forward_frame_2 - 0.063 13.5 0.1 0.063 13.5 0.1 1.0 1 0 0 1 1 1 0 DNA-J related protein VSP PF03302.13 NODE_80307_length_197_cov_1.506173_g72366_i0reverse_frame_3 - 0.016 14.1 0.5 0.017 14.0 0.5 1.0 1 0 0 1 1 1 0 Giardia variant-specific surface protein Cu PF17563.2 NODE_80302_length_197_cov_1.574074_g72361_i0forward_frame_3 - 0.49 10.6 5.5 4.9 7.4 5.5 2.1 1 1 0 1 1 1 0 Cupiennin Nucleolin_bd PF16725.5 NODE_80296_length_197_cov_1.648148_g72355_i0reverse_frame_2 - 0.013 15.1 0.1 0.013 15.1 0.1 1.3 2 0 0 2 2 2 0 Nucleolin binding domain LRR_10 PF18805.1 NODE_80294_length_197_cov_1.654321_g72353_i0reverse_frame_3 - 0.038 13.6 0.1 0.052 13.2 0.1 1.3 1 1 0 1 1 1 0 Leucine-rich repeat ABM PF03992.16 NODE_80294_length_197_cov_1.654321_g72353_i0reverse_frame_3 - 0.047 13.8 0.1 0.072 13.2 0.1 1.6 1 1 0 1 1 1 0 Antibiotic biosynthesis monooxygenase DUF3925 PF13063.6 NODE_80286_length_197_cov_1.703704_g72345_i0forward_frame_2 - 0.11 12.7 0.1 0.16 12.2 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3925) HR_lesion PF05514.11 NODE_80279_length_197_cov_1.728395_g72338_i0forward_frame_2 - 0.19 11.9 0.0 0.22 11.7 0.0 1.1 1 0 0 1 1 1 0 HR-like lesion-inducing Corona_S1 PF01600.16 NODE_80276_length_197_cov_1.728395_g72335_i0forward_frame_2 - 0.015 14.1 0.1 0.015 14.1 0.1 1.0 1 0 0 1 1 1 0 Coronavirus S1 glycoprotein DUF2782 PF11191.8 NODE_80273_length_197_cov_1.771605_g72332_i0reverse_frame_2 - 0.11 12.7 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2782) Nucleoside_tran PF01733.18 NODE_80271_length_197_cov_1.783951_g72330_i0reverse_frame_2 - 0.0011 18.4 0.4 0.0012 18.4 0.4 1.0 1 0 0 1 1 1 1 Nucleoside transporter zf-Mss51 PF13824.6 NODE_80270_length_197_cov_1.790123_g72329_i0forward_frame_3 - 1.5 9.0 13.0 0.52 10.5 2.8 2.3 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 CBM_19 PF03427.13 NODE_80270_length_197_cov_1.790123_g72329_i0forward_frame_3 - 1.8 8.6 10.3 10 6.2 4.2 2.2 1 1 1 2 2 2 0 Carbohydrate binding domain (family 19) Zn_Tnp_IS91 PF14319.6 NODE_80270_length_197_cov_1.790123_g72329_i0forward_frame_3 - 8.2 6.5 15.0 7.2 6.7 13.4 1.7 1 1 0 1 1 1 0 Transposase zinc-binding domain MFS_1 PF07690.16 NODE_80267_length_197_cov_1.833333_g72326_i0forward_frame_2 - 4.9e-06 25.7 4.4 5.4e-06 25.6 4.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF2613 PF11021.8 NODE_80267_length_197_cov_1.833333_g72326_i0forward_frame_2 - 4.3 7.5 9.4 13 6.0 3.5 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2613) MAGI_u1 PF16663.5 NODE_80265_length_197_cov_1.858025_g72324_i0reverse_frame_2 - 0.2 11.7 0.0 0.28 11.3 0.0 1.2 1 0 0 1 1 1 0 Unstructured region on MAGI Complex1_LYR_2 PF13233.6 NODE_80262_length_197_cov_1.870370_g72321_i0forward_frame_3 - 0.068 13.9 4.7 0.092 13.5 4.7 1.1 1 0 0 1 1 1 0 Complex1_LYR-like Linocin_M18 PF04454.12 NODE_80257_length_197_cov_1.907407_g72316_i0reverse_frame_3 - 0.09 12.0 0.1 0.097 11.9 0.1 1.0 1 0 0 1 1 1 0 Encapsulating protein for peroxidase DUF5474 PF17568.2 NODE_80257_length_197_cov_1.907407_g72316_i0forward_frame_2 - 0.038 14.1 0.1 0.056 13.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5474) DUF3573 PF12097.8 NODE_80254_length_197_cov_1.932099_g72313_i0reverse_frame_3 - 0.0099 14.7 1.6 0.0092 14.8 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3573) DUF2606 PF10794.9 NODE_80251_length_197_cov_1.956790_g72310_i0reverse_frame_2 - 0.035 13.9 0.4 0.035 13.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) Ribosomal_S9 PF00380.19 NODE_80249_length_197_cov_1.969136_g72308_i0reverse_frame_3 - 0.082 13.4 0.1 0.098 13.2 0.1 1.0 1 0 0 1 1 1 0 Ribosomal protein S9/S16 Baculo_19 PF04798.12 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_3 - 0.039 13.7 0.1 0.043 13.5 0.1 1.1 1 0 0 1 1 1 0 Baculovirus 19 kDa protein conserved region DUF1453 PF07301.11 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_2 - 0.021 14.8 3.6 0.024 14.6 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1453) Csm1 PF12539.8 NODE_80248_length_197_cov_1.975309_g72307_i0forward_frame_2 - 0.056 14.1 0.0 0.064 13.9 0.0 1.1 1 0 0 1 1 1 0 Chromosome segregation protein Csm1/Pcs1 RGS PF00615.19 NODE_80244_length_197_cov_1.987654_g72303_i0reverse_frame_3 - 0.028 14.7 0.6 0.032 14.5 0.6 1.0 1 0 0 1 1 1 0 Regulator of G protein signaling domain Fucokinase PF07959.12 NODE_80244_length_197_cov_1.987654_g72303_i0reverse_frame_3 - 0.081 11.8 0.4 0.092 11.7 0.4 1.0 1 0 0 1 1 1 0 L-fucokinase DUF3963 PF13124.6 NODE_80241_length_197_cov_1.993827_g72300_i0forward_frame_2 - 1.3 9.0 9.0 0.12 12.4 3.2 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3963) Plavaka PF18759.1 NODE_80232_length_197_cov_2.061728_g72291_i0forward_frame_2 - 0.099 11.9 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Plavaka transposase Proton_antipo_N PF00662.20 NODE_80231_length_197_cov_2.061728_g72290_i0reverse_frame_2 - 0.058 13.5 0.9 0.078 13.1 0.8 1.4 1 1 1 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Helicase_C PF00271.31 NODE_80228_length_197_cov_2.086420_g72287_i0reverse_frame_2 - 1.1e-16 61.2 0.0 1.1e-16 61.1 0.0 1.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain EamA PF00892.20 NODE_80223_length_197_cov_2.166667_g72282_i0forward_frame_3 - 6.4e-10 39.3 9.8 6.6e-10 39.3 9.8 1.0 1 0 0 1 1 1 1 EamA-like transporter family PUNUT PF16913.5 NODE_80223_length_197_cov_2.166667_g72282_i0forward_frame_3 - 2.6e-05 23.6 8.6 2.9e-05 23.4 8.6 1.0 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport EIID-AGA PF03613.14 NODE_80223_length_197_cov_2.166667_g72282_i0forward_frame_3 - 0.092 11.9 5.4 0.096 11.8 5.4 1.1 1 0 0 1 1 1 0 PTS system mannose/fructose/sorbose family IID component CBP_BcsG PF11658.8 NODE_80223_length_197_cov_2.166667_g72282_i0forward_frame_3 - 4.3 5.6 5.8 4.8 5.5 5.8 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG HlyIII PF03006.20 NODE_80222_length_197_cov_2.179012_g72281_i0forward_frame_3 - 0.012 15.3 0.2 0.014 15.2 0.2 1.0 1 0 0 1 1 1 0 Haemolysin-III related zf-C2H2_11 PF16622.5 NODE_80221_length_197_cov_2.197531_g72280_i0forward_frame_2 - 0.06 13.1 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 zinc-finger C2H2-type DUF3716 PF12511.8 NODE_80219_length_197_cov_2.203704_g72278_i0forward_frame_2 - 0.4 10.8 4.1 4.4 7.4 4.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) DUF412 PF04217.13 NODE_80216_length_197_cov_2.222222_g72275_i0forward_frame_3 - 0.2 11.6 0.5 0.23 11.4 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF412 FAM86 PF14904.6 NODE_80213_length_197_cov_2.246914_g72272_i0reverse_frame_2 - 0.0087 16.1 0.1 0.01 15.9 0.1 1.3 1 1 0 1 1 1 1 Family of unknown function DUF1398 PF07166.11 NODE_80212_length_197_cov_2.283951_g72271_i0forward_frame_2 - 1e-17 64.2 0.0 1.1e-17 64.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1398) CRC_subunit PF08624.10 NODE_80212_length_197_cov_2.283951_g72271_i0forward_frame_2 - 0.003 18.0 0.0 0.0033 17.9 0.0 1.1 1 0 0 1 1 1 1 Chromatin remodelling complex Rsc7/Swp82 subunit DUF1656 PF07869.12 NODE_80210_length_197_cov_2.333333_g72269_i0forward_frame_2 - 0.11 12.5 0.5 0.18 11.8 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1656) MarR PF01047.22 NODE_80209_length_197_cov_2.333333_g72268_i0forward_frame_2 - 9.8e-08 31.8 0.2 1.8e-07 30.9 0.1 1.6 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 NODE_80209_length_197_cov_2.333333_g72268_i0forward_frame_2 - 1e-06 29.1 0.2 1.9e-06 28.3 0.2 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 NODE_80209_length_197_cov_2.333333_g72268_i0forward_frame_2 - 0.00036 20.3 0.5 0.00087 19.1 0.1 1.7 2 0 0 2 2 2 1 MarR family HxlR PF01638.17 NODE_80209_length_197_cov_2.333333_g72268_i0forward_frame_2 - 0.088 12.7 0.1 0.1 12.5 0.1 1.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix DUF2229 PF09989.9 NODE_80208_length_197_cov_2.351852_g72267_i0forward_frame_3 - 0.12 12.0 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) Citrus_P18 PF05520.11 NODE_80207_length_197_cov_2.351852_g72266_i0forward_frame_2 - 0.049 13.4 0.1 0.054 13.2 0.1 1.2 1 0 0 1 1 1 0 Citrus tristeza virus P18 protein Swm2 PF17083.5 NODE_80207_length_197_cov_2.351852_g72266_i0forward_frame_2 - 0.068 13.2 0.1 0.071 13.1 0.1 1.1 1 0 0 1 1 1 0 Nucleolar protein Swm2 Laterosporulin PF17861.1 NODE_80206_length_197_cov_2.364198_g72265_i0reverse_frame_3 - 0.058 13.8 0.1 0.077 13.4 0.1 1.3 1 0 0 1 1 1 0 Laterosporulin defensin-like peptide GATase_4 PF13230.6 NODE_80203_length_197_cov_2.388889_g72262_i0reverse_frame_2 - 4.8e-07 28.9 0.2 5.7e-07 28.7 0.2 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Pput2613-deam PF14427.6 NODE_80196_length_197_cov_2.574074_g72255_i0forward_frame_3 - 0.1 12.5 0.1 0.11 12.4 0.1 1.0 1 0 0 1 1 1 0 Pput_2613-like deaminase HELP PF03451.14 NODE_80190_length_197_cov_2.765432_g72249_i0forward_frame_3 - 0.15 11.9 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 HELP motif DUF4096 PF13340.6 NODE_80190_length_197_cov_2.765432_g72249_i0forward_frame_2 - 0.092 13.0 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) DUF1796 PF08795.10 NODE_80188_length_197_cov_2.833333_g72247_i0reverse_frame_2 - 0.14 12.1 0.1 0.17 11.9 0.1 1.1 1 0 0 1 1 1 0 Putative papain-like cysteine peptidase (DUF1796) Glyco_trans_4_3 PF12000.8 NODE_80187_length_197_cov_2.833333_g72246_i0forward_frame_3 - 0.038 13.7 0.2 0.049 13.3 0.2 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 4 group DUF892 PF05974.12 NODE_80182_length_197_cov_2.938272_g72241_i0reverse_frame_3 - 8.1e-15 55.2 0.0 8.4e-15 55.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) PPR_3 PF13812.6 NODE_80182_length_197_cov_2.938272_g72241_i0reverse_frame_3 - 0.055 13.5 0.0 0.073 13.2 0.0 1.2 1 0 0 1 1 1 0 Pentatricopeptide repeat domain BD_b_sandwich PF18820.1 NODE_80180_length_197_cov_3.074074_g72239_i0reverse_frame_3 - 0.033 14.2 0.1 0.036 14.1 0.1 1.1 1 0 0 1 1 1 0 Bdellovibrio Beta-sandwich Npa1 PF11707.8 NODE_80179_length_197_cov_3.092593_g72238_i0forward_frame_3 - 0.036 13.4 0.1 0.038 13.4 0.1 1.0 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal LPAM_1 PF08139.12 NODE_80175_length_197_cov_3.796296_g72234_i0forward_frame_3 - 0.14 12.7 2.7 0.5 11.0 2.7 1.9 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Nucleoside_tran PF01733.18 NODE_80174_length_197_cov_3.851852_g72233_i0forward_frame_3 - 0.0026 17.2 1.1 0.0027 17.1 1.1 1.0 1 0 0 1 1 1 1 Nucleoside transporter DUF936 PF06075.12 NODE_80173_length_197_cov_3.901235_g72232_i0reverse_frame_2 - 0.072 12.0 0.0 0.072 12.0 0.0 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) DUF805 PF05656.14 NODE_80167_length_197_cov_7.123457_g72226_i0forward_frame_3 - 0.084 13.3 1.7 0.093 13.1 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF805) DUF4939 PF16297.5 NODE_80165_length_197_cov_7.623457_g72224_i0forward_frame_2 - 0.12 12.2 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4939) EZH2_N PF18601.1 NODE_80165_length_197_cov_7.623457_g72224_i0forward_frame_2 - 0.15 12.4 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 EZH2 N-terminal domain RIH_assoc PF08454.11 NODE_80161_length_197_cov_13.000000_g72220_i0forward_frame_2 - 0.036 13.9 0.1 0.036 13.9 0.1 1.1 1 0 0 1 1 1 0 RyR and IP3R Homology associated SRI PF08236.11 NODE_80154_length_197_cov_20.135802_g72213_i0forward_frame_3 - 0.0018 18.4 1.8 0.002 18.3 1.8 1.1 1 0 0 1 1 1 1 SRI (Set2 Rpb1 interacting) domain CR6_interact PF10147.9 NODE_80153_length_197_cov_20.506173_g72212_i0reverse_frame_2 - 0.04 13.6 4.5 0.042 13.5 4.5 1.0 1 0 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 DUF4710 PF15828.5 NODE_80153_length_197_cov_20.506173_g72212_i0reverse_frame_2 - 2.8 8.1 12.4 3.9 7.7 12.1 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4710) SPC12 PF06645.13 NODE_80153_length_197_cov_20.506173_g72212_i0forward_frame_3 - 9.3 6.4 10.9 6.2 7.0 3.4 2.0 1 1 1 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) NS3_envE PF02723.14 NODE_80153_length_197_cov_20.506173_g72212_i0forward_frame_2 - 0.11 12.6 5.5 0.13 12.4 5.5 1.1 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E DUF4710 PF15828.5 NODE_80151_length_197_cov_23.302469_g72210_i0reverse_frame_3 - 0.0027 17.8 5.0 0.0032 17.5 5.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4710) DUF2208 PF09973.9 NODE_80151_length_197_cov_23.302469_g72210_i0forward_frame_3 - 0.072 12.7 0.0 0.076 12.6 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) DUF346 PF03984.13 NODE_80146_length_197_cov_26.820988_g72205_i0forward_frame_2 - 0.069 12.9 1.5 0.073 12.8 0.1 1.8 3 0 0 3 3 3 0 Repeat of unknown function (DUF346) SieB PF14163.6 NODE_80144_length_197_cov_27.259259_g72203_i0reverse_frame_2 - 1.7 8.1 4.2 1.9 8.0 4.2 1.0 1 0 0 1 1 1 0 Super-infection exclusion protein B CBM_14 PF01607.24 NODE_80141_length_197_cov_29.932099_g72200_i0reverse_frame_2 - 0.049 13.8 0.6 0.061 13.5 0.6 1.1 1 0 0 1 1 1 0 Chitin binding Peritrophin-A domain Pepdidase_M14_N PF18027.1 NODE_80135_length_197_cov_36.746914_g72194_i0reverse_frame_3 - 0.031 14.6 0.4 0.038 14.3 0.4 1.3 1 1 0 1 1 1 0 Cytosolic carboxypeptidase N-terminal domain NOT2_3_5 PF04153.18 NODE_80133_length_197_cov_40.123457_g72192_i0forward_frame_2 - 0.036 14.2 0.1 0.04 14.0 0.1 1.1 1 0 0 1 1 1 0 NOT2 / NOT3 / NOT5 family DUF1298 PF06974.13 NODE_80132_length_197_cov_40.308642_g72191_i0forward_frame_3 - 0.021 14.7 0.0 0.024 14.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1298) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks383.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks383.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks383.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks383.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- START PF01852.19 NODE_80126_length_197_cov_43.129630_g72185_i0forward_frame_2 - 0.02 14.3 0.0 0.021 14.3 0.0 1.0 1 0 0 1 1 1 0 START domain Optomotor-blind PF11078.8 NODE_80124_length_197_cov_46.432099_g72183_i0forward_frame_3 - 0.092 13.3 0.0 0.1 13.1 0.0 1.1 1 0 0 1 1 1 0 Optomotor-blind protein N-terminal region zf_C2H2_ZHX PF18387.1 NODE_80124_length_197_cov_46.432099_g72183_i0forward_frame_3 - 0.14 11.8 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Zinc-fingers and homeoboxes C2H2 finger domain BRX PF08381.11 NODE_80114_length_197_cov_52.722222_g72173_i0reverse_frame_3 - 0.11 11.9 1.8 0.15 11.4 1.8 1.3 1 1 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 Eno-Rase_FAD_bd PF07055.12 NODE_80114_length_197_cov_52.722222_g72173_i0reverse_frame_3 - 0.16 12.4 0.0 0.19 12.2 0.0 1.1 1 0 0 1 1 1 0 Enoyl reductase FAD binding domain Tombus_P19 PF03220.13 NODE_80113_length_197_cov_54.722222_g72172_i0reverse_frame_3 - 0.11 12.2 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Tombusvirus P19 core protein IQ PF00612.27 NODE_80109_length_197_cov_60.376543_g72168_i0reverse_frame_3 - 0.048 13.5 1.7 0.048 13.5 1.7 1.8 2 0 0 2 2 2 0 IQ calmodulin-binding motif DDRGK PF09756.9 NODE_80105_length_197_cov_73.141975_g72164_i0reverse_frame_3 - 6.2 6.4 24.3 7.1 6.2 24.3 1.0 1 0 0 1 1 1 0 DDRGK domain Macoilin PF09726.9 NODE_80104_length_197_cov_74.296296_g72163_i0forward_frame_2 - 4.5 5.7 8.5 4.7 5.7 8.5 1.0 1 0 0 1 1 1 0 Macoilin family DDE_3 PF13358.6 NODE_80100_length_197_cov_78.172840_g72159_i0reverse_frame_2 - 0.023 14.4 0.1 0.024 14.4 0.1 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease DND1_DSRM PF14709.7 NODE_80096_length_197_cov_89.623457_g72155_i0reverse_frame_3 - 0.047 14.0 0.0 0.059 13.6 0.0 1.2 1 0 0 1 1 1 0 double strand RNA binding domain from DEAD END PROTEIN 1 DUF3070 PF11270.8 NODE_80095_length_197_cov_91.166667_g72154_i0reverse_frame_2 - 0.17 12.1 0.1 0.21 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3070) IGPS PF00218.21 NODE_80095_length_197_cov_91.166667_g72154_i0forward_frame_3 - 0.17 11.0 0.0 0.19 10.8 0.0 1.0 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase zf-SCNM1 PF15803.5 NODE_80090_length_197_cov_135.432099_g72149_i0reverse_frame_2 - 0.037 13.7 0.1 0.18 11.5 0.0 2.0 2 0 0 2 2 2 0 Zinc-finger of sodium channel modifier 1 PARP PF00644.20 NODE_80085_length_197_cov_163.506173_g72144_i0forward_frame_3 - 0.078 12.6 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain CDO_I PF05995.12 NODE_80083_length_197_cov_192.808642_g72142_i0forward_frame_2 - 0.043 13.1 0.1 0.043 13.1 0.1 1.1 1 0 0 1 1 1 0 Cysteine dioxygenase type I PDR_CDR PF06422.12 NODE_80082_length_197_cov_209.376543_g72141_i0reverse_frame_2 - 3.6 7.6 8.3 0.63 10.0 4.6 1.6 1 1 1 2 2 2 0 CDR ABC transporter Wyosine_form PF08608.12 NODE_80082_length_197_cov_209.376543_g72141_i0forward_frame_2 - 0.021 15.2 0.0 0.025 14.9 0.0 1.2 1 0 0 1 1 1 0 Wyosine base formation SR-25 PF10500.9 NODE_80079_length_197_cov_495.574074_g72138_i0reverse_frame_3 - 1.7 8.2 9.3 1.7 8.2 9.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF872 PF05915.12 NODE_80077_length_197_cov_28661.567901_g72136_i0reverse_frame_3 - 0.033 14.3 0.7 0.035 14.3 0.7 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) RNA_pol_Rpb2_3 PF04565.16 NODE_80071_length_198_cov_0.834356_g72130_i0forward_frame_2 - 0.037 14.2 0.1 0.04 14.1 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 3 SHP PF03579.13 NODE_80068_length_198_cov_0.871166_g72127_i0forward_frame_2 - 0.14 12.1 1.4 0.43 10.6 1.4 1.7 1 1 0 1 1 1 0 Small hydrophobic protein Fra10Ac1 PF09725.9 NODE_80066_length_198_cov_0.883436_g72125_i0reverse_frame_2 - 0.14 12.3 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Folate-sensitive fragile site protein Fra10Ac1 DUF1091 PF06477.13 NODE_80060_length_198_cov_0.920245_g72119_i0reverse_frame_3 - 0.036 14.6 0.5 0.047 14.2 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1091) TraY PF05509.11 NODE_80057_length_198_cov_0.944785_g72116_i0reverse_frame_2 - 0.18 11.9 0.6 0.3 11.1 0.6 1.5 1 0 0 1 1 1 0 TraY domain CinA PF02464.17 NODE_80054_length_198_cov_0.963190_g72113_i0forward_frame_2 - 0.0036 16.9 0.0 0.0037 16.8 0.0 1.1 1 0 0 1 1 1 1 Competence-damaged protein SR-25 PF10500.9 NODE_80049_length_198_cov_0.975460_g72108_i0reverse_frame_2 - 0.029 14.0 12.1 0.029 14.0 12.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein SP_C-Propep PF08999.10 NODE_80048_length_198_cov_0.975460_g72107_i0reverse_frame_3 - 0.12 12.2 8.7 0.13 12.0 8.7 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide ECSCR PF15820.5 NODE_80048_length_198_cov_0.975460_g72107_i0reverse_frame_3 - 0.46 10.3 6.9 0.51 10.2 6.9 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Transglut_C PF00927.22 NODE_80048_length_198_cov_0.975460_g72107_i0reverse_frame_2 - 0.077 13.1 0.1 0.094 12.9 0.1 1.1 1 0 0 1 1 1 0 Transglutaminase family, C-terminal ig like domain FSA_C PF10479.9 NODE_80048_length_198_cov_0.975460_g72107_i0forward_frame_3 - 0.17 10.0 2.0 0.17 10.0 2.0 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus SSP160 PF06933.11 NODE_80048_length_198_cov_0.975460_g72107_i0forward_frame_3 - 7.7 4.6 15.3 7.1 4.7 15.3 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 RNA_polI_A14 PF08203.11 NODE_80047_length_198_cov_0.975460_g72106_i0reverse_frame_3 - 0.11 13.2 1.2 0.13 13.0 1.2 1.1 1 0 0 1 1 1 0 Yeast RNA polymerase I subunit RPA14 EFG_II PF14492.6 NODE_80045_length_198_cov_0.975460_g72104_i0reverse_frame_2 - 2.3e-05 24.4 0.0 3e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Elongation Factor G, domain II zinc_ribbon_15 PF17032.5 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.013 16.3 1.7 0.015 16.1 1.7 1.1 1 0 0 1 1 1 0 zinc-ribbon family zf_UBZ PF18439.1 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.063 12.9 0.2 0.13 11.8 0.2 1.6 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger Cytochrome_CBB3 PF13442.6 NODE_80032_length_198_cov_0.981595_g72091_i0reverse_frame_2 - 0.063 13.6 0.1 0.069 13.5 0.1 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III DUF2492 PF10678.9 NODE_80032_length_198_cov_0.981595_g72091_i0forward_frame_3 - 0.082 13.2 0.0 0.091 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) DUF244 PF03112.14 NODE_80030_length_198_cov_0.981595_g72089_i0reverse_frame_3 - 0.017 15.0 0.1 0.017 14.9 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF ADD_DNMT3 PF17980.1 NODE_80028_length_198_cov_0.981595_g72087_i0reverse_frame_2 - 0.32 11.0 2.6 6.1 6.9 0.1 2.2 2 0 0 2 2 2 0 Cysteine rich ADD domain in DNMT3 Tim29 PF10171.9 NODE_80019_length_198_cov_0.981595_g72078_i0forward_frame_3 - 0.039 13.5 0.6 0.042 13.3 0.6 1.0 1 0 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 DEAD PF00270.29 NODE_80019_length_198_cov_0.981595_g72078_i0forward_frame_2 - 7.7e-10 38.8 0.0 7.7e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase RbpA PF13397.6 NODE_80018_length_198_cov_0.981595_g72077_i0reverse_frame_3 - 0.053 14.1 0.0 0.059 14.0 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase-binding protein DUF1658 PF07871.11 NODE_80016_length_198_cov_0.981595_g72075_i0forward_frame_2 - 3.5 7.7 6.8 11 6.2 6.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1658) T4_tail_cap PF11091.8 NODE_80015_length_198_cov_0.981595_g72074_i0reverse_frame_2 - 0.21 10.5 0.0 0.23 10.3 0.0 1.0 1 0 0 1 1 1 0 Tail-tube assembly protein DUF1467 PF07330.12 NODE_80013_length_198_cov_0.981595_g72072_i0forward_frame_3 - 0.047 13.6 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1467) RVT_2 PF07727.14 NODE_80011_length_198_cov_0.981595_g72070_i0forward_frame_2 - 4.1e-05 23.4 0.0 4.4e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4441 PF14536.6 NODE_79989_length_198_cov_1.092025_g72048_i0forward_frame_2 - 0.039 14.2 0.4 0.057 13.6 0.3 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) DUF2584 PF10763.9 NODE_79989_length_198_cov_1.092025_g72048_i0forward_frame_2 - 0.15 12.2 0.1 0.22 11.7 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2584) DUF5516 PF17637.2 NODE_79981_length_198_cov_1.116564_g72040_i0forward_frame_3 - 0.43 10.4 6.4 0.24 11.2 1.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5516) AIRS_C PF02769.22 NODE_79976_length_198_cov_1.134969_g72035_i0forward_frame_3 - 5.4e-07 29.9 0.1 6.1e-07 29.7 0.1 1.0 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Nrap_D4 PF17405.2 NODE_79972_length_198_cov_1.147239_g72031_i0reverse_frame_2 - 0.18 11.1 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 DUF3302 PF11742.8 NODE_79961_length_198_cov_1.177914_g72020_i0forward_frame_3 - 0.028 14.5 0.0 0.034 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3302) YhfH PF14149.6 NODE_79961_length_198_cov_1.177914_g72020_i0forward_frame_2 - 0.026 14.5 0.9 0.026 14.5 0.9 1.9 2 0 0 2 2 2 0 YhfH-like protein Penaeidin PF05927.11 NODE_79958_length_198_cov_1.196319_g72017_i0forward_frame_3 - 0.013 16.2 1.4 0.014 16.2 1.4 1.1 1 0 0 1 1 1 0 Penaeidin lci PF12197.8 NODE_79954_length_198_cov_1.220859_g72013_i0forward_frame_2 - 0.04 13.7 0.2 0.04 13.7 0.2 1.6 2 0 0 2 2 2 0 Bacillus cereus group antimicrobial protein Toxin_13 PF07822.11 NODE_79952_length_198_cov_1.220859_g72011_i0forward_frame_3 - 0.09 12.9 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 Neurotoxin B-IV-like protein LytTR PF04397.15 NODE_79951_length_198_cov_1.226994_g72010_i0reverse_frame_2 - 0.047 13.9 0.1 0.064 13.5 0.1 1.3 1 0 0 1 1 1 0 LytTr DNA-binding domain SWIM PF04434.17 NODE_79945_length_198_cov_1.226994_g72004_i0forward_frame_2 - 0.0083 15.8 4.3 0.013 15.1 4.3 1.3 1 0 0 1 1 1 1 SWIM zinc finger YpjP PF14005.6 NODE_79937_length_198_cov_1.263804_g71996_i0reverse_frame_2 - 0.033 14.2 2.9 0.037 14.1 2.9 1.0 1 0 0 1 1 1 0 YpjP-like protein SlyX PF04102.12 NODE_79937_length_198_cov_1.263804_g71996_i0reverse_frame_2 - 0.092 13.4 3.0 0.15 12.7 3.0 1.5 1 1 0 1 1 1 0 SlyX DUF501 PF04417.12 NODE_79937_length_198_cov_1.263804_g71996_i0reverse_frame_2 - 0.15 11.8 1.9 0.18 11.6 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF501) CLP1_P PF16575.5 NODE_79936_length_198_cov_1.288344_g71995_i0reverse_frame_2 - 9.5e-05 22.3 0.0 0.0001 22.2 0.0 1.0 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop HalOD2 PF18547.1 NODE_79934_length_198_cov_1.300613_g71993_i0reverse_frame_3 - 0.65 9.9 4.0 6 6.9 0.2 2.1 1 1 1 2 2 2 0 Halobacterial output domain 2 Lamprin PF06403.11 NODE_79934_length_198_cov_1.300613_g71993_i0reverse_frame_2 - 0.08 12.9 0.3 0.08 12.9 0.3 1.1 1 0 0 1 1 1 0 Lamprin zinc_ribbon_11 PF11682.8 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_3 - 0.083 12.9 0.4 0.091 12.8 0.4 1.1 1 0 0 1 1 1 0 Probable zinc-ribbon Iron_permease PF04120.12 NODE_79930_length_198_cov_1.319018_g71989_i0forward_frame_2 - 0.06 13.1 0.2 0.063 13.0 0.2 1.1 1 0 0 1 1 1 0 Low affinity iron permease Fer2_3 PF13085.6 NODE_79927_length_198_cov_1.331288_g71986_i0reverse_frame_2 - 0.14 12.2 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF4805 PF16063.5 NODE_79926_length_198_cov_1.337423_g71985_i0reverse_frame_2 - 0.0064 15.9 0.9 0.0068 15.8 0.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4805) DUF1658 PF07871.11 NODE_79923_length_198_cov_1.355828_g71982_i0reverse_frame_2 - 0.11 12.5 0.5 0.27 11.3 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) DUF3561 PF12084.8 NODE_79920_length_198_cov_1.374233_g71979_i0forward_frame_2 - 0.02 14.9 2.0 0.023 14.7 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3561) DUF1736 PF08409.11 NODE_79918_length_198_cov_1.398773_g71977_i0reverse_frame_2 - 0.029 14.3 0.9 0.037 14.0 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1736) CDC13_N PF16853.5 NODE_79916_length_198_cov_1.404908_g71975_i0forward_frame_3 - 0.014 15.0 0.2 0.014 14.9 0.2 1.0 1 0 0 1 1 1 0 Cell division control protein 13 N-terminus NinE PF05322.11 NODE_79916_length_198_cov_1.404908_g71975_i0forward_frame_2 - 0.17 11.8 1.3 5.7 6.9 0.1 2.1 2 0 0 2 2 2 0 NINE Protein Leg1 PF05612.12 NODE_79910_length_198_cov_1.435583_g71969_i0reverse_frame_3 - 0.14 11.3 0.1 0.15 11.2 0.1 1.0 1 0 0 1 1 1 0 Leg1 Phage_TAC_5 PF08890.11 NODE_79900_length_198_cov_1.453988_g71959_i0forward_frame_2 - 0.018 15.0 1.8 0.02 14.9 1.8 1.1 1 0 0 1 1 1 0 Phage XkdN-like tail assembly chaperone protein, TAC HJURP_C PF12347.8 NODE_79898_length_198_cov_1.453988_g71957_i0reverse_frame_3 - 2.1 8.4 8.3 1.8e+02 2.3 8.3 2.0 1 1 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat Ost4 PF10215.9 NODE_79895_length_198_cov_1.460123_g71954_i0reverse_frame_3 - 6 6.8 8.1 1.1 9.2 4.1 1.8 2 0 0 2 2 2 0 Oligosaccaryltransferase Hep_core_N PF08290.11 NODE_79895_length_198_cov_1.460123_g71954_i0reverse_frame_2 - 0.1 12.6 1.8 0.23 11.5 1.8 1.5 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger Toprim_4 PF13662.6 NODE_79890_length_198_cov_1.460123_g71949_i0reverse_frame_3 - 4.8e-07 30.1 0.0 5.8e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 Toprim domain RecR PF02132.15 NODE_79890_length_198_cov_1.460123_g71949_i0reverse_frame_3 - 6.8e-07 28.8 3.2 1e-06 28.2 3.2 1.3 1 0 0 1 1 1 1 RecR protein DUF1477 PF07346.11 NODE_79890_length_198_cov_1.460123_g71949_i0reverse_frame_3 - 0.0049 17.1 0.2 0.0055 16.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1477) Integrin_alpha PF00357.20 NODE_79889_length_198_cov_1.466258_g71948_i0forward_frame_2 - 0.054 13.5 0.5 0.17 12.0 0.5 1.9 1 0 0 1 1 1 0 Integrin alpha cytoplasmic region Peptidase_S48 PF03574.15 NODE_79888_length_198_cov_1.466258_g71947_i0reverse_frame_3 - 0.18 12.0 0.0 0.19 11.9 0.0 1.0 1 0 0 1 1 1 0 Peptidase family S48 DUF5332 PF17266.2 NODE_79887_length_198_cov_1.466258_g71946_i0forward_frame_2 - 0.012 15.3 2.5 0.017 14.8 2.5 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5332) Cytochrom_B558a PF05038.13 NODE_79881_length_198_cov_1.472393_g71940_i0forward_frame_2 - 0.0088 15.6 0.0 0.0096 15.5 0.0 1.0 1 0 0 1 1 1 1 Cytochrome Cytochrome b558 alpha-subunit DUF3128 PF11326.8 NODE_79879_length_198_cov_1.472393_g71938_i0reverse_frame_3 - 0.0077 16.6 0.3 0.0099 16.2 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3128) Planc_extracel PF07595.12 NODE_79877_length_198_cov_1.472393_g71936_i0forward_frame_2 - 0.078 12.8 0.9 0.078 12.8 0.9 1.6 2 0 0 2 2 2 0 Planctomycete extracellular YajC PF02699.15 NODE_79877_length_198_cov_1.472393_g71936_i0forward_frame_2 - 0.11 12.4 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit FANC_SAP PF18081.1 NODE_79877_length_198_cov_1.472393_g71936_i0forward_frame_2 - 0.15 12.2 0.8 0.18 12.0 0.8 1.1 1 0 0 1 1 1 0 Fanconi anemia-associated nuclease SAP domain DUF2434 PF10361.9 NODE_79876_length_198_cov_1.472393_g71935_i0reverse_frame_3 - 0.056 12.4 0.0 0.059 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2434) CBM_5_12 PF02839.14 NODE_79866_length_198_cov_1.521472_g71925_i0forward_frame_3 - 0.021 15.4 3.9 0.021 15.4 3.9 2.6 2 2 0 2 2 2 0 Carbohydrate binding domain DUF3770 PF12603.8 NODE_79865_length_198_cov_1.521472_g71924_i0reverse_frame_3 - 0.0088 15.6 0.0 0.0091 15.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3770) zf-C2H2 PF00096.26 NODE_79865_length_198_cov_1.521472_g71924_i0forward_frame_3 - 0.026 15.0 0.8 0.026 15.0 0.8 2.7 4 0 0 4 4 4 0 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 NODE_79865_length_198_cov_1.521472_g71924_i0forward_frame_3 - 0.046 14.0 4.1 0.094 13.0 0.5 2.4 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_4 PF13894.6 NODE_79865_length_198_cov_1.521472_g71924_i0forward_frame_3 - 0.053 14.4 0.7 0.053 14.4 0.7 2.9 3 1 0 3 3 3 0 C2H2-type zinc finger zf-C2H2_2 PF12756.7 NODE_79865_length_198_cov_1.521472_g71924_i0forward_frame_3 - 0.13 12.6 6.9 0.15 12.4 6.9 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) DUF2610 PF11020.8 NODE_79864_length_198_cov_1.533742_g71923_i0reverse_frame_2 - 0.12 12.3 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) BIR PF00653.21 NODE_79862_length_198_cov_1.546012_g71921_i0forward_frame_2 - 0.08 13.6 1.8 0.098 13.3 1.8 1.2 1 0 0 1 1 1 0 Inhibitor of Apoptosis domain OSTMP1 PF09777.9 NODE_79859_length_198_cov_1.558282_g71918_i0forward_frame_3 - 0.089 12.2 0.1 0.089 12.2 0.1 1.1 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor Bacteriocin_IId PF09221.10 NODE_79853_length_198_cov_1.582822_g71912_i0reverse_frame_2 - 0.063 13.5 4.3 0.084 13.1 4.3 1.2 1 0 0 1 1 1 0 Bacteriocin class IId cyclical uberolysin-like HipA_C PF07804.12 NODE_79850_length_198_cov_1.588957_g71909_i0forward_frame_2 - 0.082 12.6 0.0 0.083 12.6 0.0 1.0 1 0 0 1 1 1 0 HipA-like C-terminal domain XPA_N PF01286.18 NODE_79849_length_198_cov_1.595092_g71908_i0forward_frame_2 - 0.098 12.7 0.2 0.15 12.2 0.2 1.3 1 0 0 1 1 1 0 XPA protein N-terminal DUF3837 PF12939.7 NODE_79845_length_198_cov_1.638037_g71904_i0reverse_frame_2 - 0.097 13.1 0.3 0.14 12.6 0.3 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3837) Porin_3 PF01459.22 NODE_79845_length_198_cov_1.638037_g71904_i0reverse_frame_2 - 0.2 11.1 0.0 0.21 11.0 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic porin Ibs_toxin PF13956.6 NODE_79844_length_198_cov_1.638037_g71903_i0forward_frame_2 - 0.053 13.5 0.5 0.13 12.3 0.5 1.6 1 0 0 1 1 1 0 Toxin Ibs, type I toxin-antitoxin system THDPS_N_2 PF14805.6 NODE_79841_length_198_cov_1.650307_g71900_i0reverse_frame_3 - 0.071 13.3 0.0 0.077 13.2 0.0 1.1 1 0 0 1 1 1 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal DUF2069 PF09842.9 NODE_79838_length_198_cov_1.687117_g71897_i0reverse_frame_2 - 0.0066 16.6 0.0 0.0072 16.5 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2069) DUF1957 PF09210.11 NODE_79838_length_198_cov_1.687117_g71897_i0reverse_frame_2 - 0.082 13.3 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1957) OTT_1508_deam PF14441.6 NODE_79838_length_198_cov_1.687117_g71897_i0reverse_frame_2 - 0.28 11.2 4.4 0.69 10.0 1.4 2.1 1 1 1 2 2 2 0 OTT_1508-like deaminase zf-B_box PF00643.24 NODE_79838_length_198_cov_1.687117_g71897_i0reverse_frame_2 - 1.5 9.0 6.7 0.56 10.4 1.2 2.1 2 0 0 2 2 2 0 B-box zinc finger SelK_SelG PF10961.8 NODE_79836_length_198_cov_1.693252_g71895_i0reverse_frame_3 - 0.21 12.2 0.2 0.25 12.0 0.2 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG DUF2985 PF11204.8 NODE_79835_length_198_cov_1.699387_g71894_i0forward_frame_3 - 0.11 12.7 0.7 0.13 12.5 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2985) P53 PF00870.18 NODE_79834_length_198_cov_1.699387_g71893_i0reverse_frame_3 - 0.055 13.2 0.1 0.059 13.1 0.1 1.0 1 0 0 1 1 1 0 P53 DNA-binding domain DUF1249 PF06853.12 NODE_79826_length_198_cov_1.711656_g71885_i0forward_frame_3 - 0.061 13.4 0.1 0.065 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1249) BRX_N PF13713.6 NODE_79823_length_198_cov_1.717791_g71882_i0reverse_frame_3 - 0.18 11.6 0.1 0.27 11.0 0.1 1.2 1 0 0 1 1 1 0 Transcription factor BRX N-terminal domain Ish1 PF10281.9 NODE_79819_length_198_cov_1.736196_g71878_i0forward_frame_2 - 9.4e-05 22.6 0.0 0.00014 22.1 0.0 1.3 1 0 0 1 1 1 1 Putative stress-responsive nuclear envelope protein DivIC PF04977.15 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.0043 16.8 3.2 0.005 16.6 3.2 1.1 1 0 0 1 1 1 1 Septum formation initiator Latarcin PF10279.9 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.0075 16.6 1.3 0.009 16.4 1.3 1.1 1 0 0 1 1 1 1 Latarcin precursor DUF3584 PF12128.8 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.0085 13.7 1.6 0.0087 13.6 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF4061 PF13270.6 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.009 16.3 0.6 0.0099 16.2 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4061) CCDC74_C PF14917.6 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.035 14.6 1.0 0.038 14.5 1.0 1.0 1 0 0 1 1 1 0 Coiled coil protein 74, C terminal FOXP-CC PF16159.5 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.22 12.2 4.5 0.41 11.3 0.5 2.0 1 1 1 2 2 2 0 FOXP coiled-coil domain DUF4199 PF13858.6 NODE_79813_length_198_cov_1.791411_g71872_i0forward_frame_3 - 0.14 12.6 0.3 0.15 12.5 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) PKD_channel PF08016.12 NODE_79811_length_198_cov_1.803681_g71870_i0reverse_frame_3 - 0.054 12.2 2.3 0.059 12.0 2.3 1.0 1 0 0 1 1 1 0 Polycystin cation channel Toxin_33 PF08121.11 NODE_79807_length_198_cov_1.834356_g71866_i0reverse_frame_2 - 0.036 13.9 0.2 0.036 13.9 0.2 1.7 2 0 0 2 2 2 0 Waglerin family DUF1283 PF06932.11 NODE_79806_length_198_cov_1.834356_g71865_i0reverse_frame_3 - 0.014 15.5 1.7 0.022 14.9 1.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) U1snRNP70_N PF12220.8 NODE_79806_length_198_cov_1.834356_g71865_i0reverse_frame_3 - 0.13 12.9 4.4 0.17 12.6 4.4 1.1 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Cytomega_TRL10 PF06084.11 NODE_79806_length_198_cov_1.834356_g71865_i0reverse_frame_2 - 0.075 13.0 0.3 0.081 12.9 0.3 1.1 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein DUF3730 PF12530.8 NODE_79805_length_198_cov_1.834356_g71864_i0reverse_frame_3 - 0.12 11.9 0.0 0.2 11.2 0.0 1.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3730) Cir_Bir_Yir PF06022.11 NODE_79804_length_198_cov_1.840491_g71863_i0forward_frame_3 - 0.02 14.4 3.4 0.024 14.2 3.4 1.0 1 0 0 1 1 1 0 Plasmodium variant antigen protein Cir/Yir/Bir Hexapep_2 PF14602.6 NODE_79799_length_198_cov_1.877301_g71858_i0reverse_frame_3 - 0.12 12.2 0.1 0.19 11.5 0.1 1.3 1 0 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase PROL5-SMR PF15621.6 NODE_79796_length_198_cov_1.895706_g71855_i0reverse_frame_3 - 0.1 13.1 0.1 0.13 12.8 0.1 1.2 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Helicase_C PF00271.31 NODE_79796_length_198_cov_1.895706_g71855_i0reverse_frame_2 - 1.7e-07 31.6 0.0 1.7e-07 31.5 0.0 1.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Fam20C PF06702.12 NODE_79794_length_198_cov_1.901840_g71853_i0forward_frame_2 - 0.025 14.4 0.1 0.027 14.3 0.1 1.1 1 0 0 1 1 1 0 Golgi casein kinase, C-terminal, Fam20 COX4 PF02936.14 NODE_79792_length_198_cov_1.914110_g71851_i0reverse_frame_2 - 0.0039 17.2 0.1 0.0041 17.1 0.1 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase subunit IV EAL PF00563.20 NODE_79790_length_198_cov_1.932515_g71849_i0reverse_frame_3 - 4.8e-19 68.8 0.0 5e-19 68.8 0.0 1.0 1 0 0 1 1 1 1 EAL domain 4HBT_2 PF13279.6 NODE_79784_length_198_cov_1.950920_g71843_i0reverse_frame_3 - 0.14 12.7 0.0 0.15 12.5 0.0 1.0 1 0 0 1 1 1 0 Thioesterase-like superfamily TBK1_ULD PF18396.1 NODE_79783_length_198_cov_1.950920_g71842_i0reverse_frame_2 - 0.11 12.4 0.0 0.13 12.2 0.0 1.0 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain PATR PF12951.7 NODE_79778_length_198_cov_1.963190_g71837_i0reverse_frame_2 - 1e-05 25.6 0.1 1.6e-05 24.9 0.1 1.4 1 0 0 1 1 1 1 Passenger-associated-transport-repeat Prot_inhib_II PF02428.15 NODE_79777_length_198_cov_1.963190_g71836_i0reverse_frame_3 - 0.0075 16.7 2.4 0.0091 16.4 2.4 1.1 1 0 0 1 1 1 1 Potato type II proteinase inhibitor family DUF257 PF03192.13 NODE_79776_length_198_cov_1.963190_g71835_i0forward_frame_3 - 0.014 15.2 0.8 0.015 15.1 0.8 1.0 1 0 0 1 1 1 0 Pyrococcus protein of unknown function, DUF257 ubiquitin PF00240.23 NODE_79775_length_198_cov_1.963190_g71834_i0reverse_frame_2 - 2.4e-11 43.2 0.1 2.7e-11 43.0 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_79775_length_198_cov_1.963190_g71834_i0reverse_frame_2 - 2.6e-08 33.6 0.4 2.7e-08 33.5 0.4 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_79775_length_198_cov_1.963190_g71834_i0reverse_frame_2 - 0.075 13.5 0.2 0.34 11.4 0.2 1.8 1 1 0 1 1 1 0 Ubiquitin-like domain DUF4798 PF16055.5 NODE_79774_length_198_cov_1.969325_g71833_i0reverse_frame_2 - 7.3 6.9 6.6 9.3 6.6 6.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4798) PHC2_SAM_assoc PF16616.5 NODE_79770_length_198_cov_1.993865_g71829_i0forward_frame_2 - 0.15 12.9 0.0 0.19 12.6 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on Polyhomeotic-like protein 1 and 2 IF3_N PF05198.16 NODE_79763_length_198_cov_2.116564_g71822_i0reverse_frame_3 - 0.079 13.2 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Translation initiation factor IF-3, N-terminal domain DUF2774 PF11242.8 NODE_79762_length_198_cov_2.128834_g71821_i0reverse_frame_3 - 0.17 12.1 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) UvsY PF11056.8 NODE_79761_length_198_cov_2.128834_g71820_i0reverse_frame_3 - 0.013 15.8 2.0 0.014 15.7 2.0 1.1 1 0 0 1 1 1 0 Recombination, repair and ssDNA binding protein UvsY SLATT_1 PF18181.1 NODE_79760_length_198_cov_2.184049_g71819_i0forward_frame_3 - 0.011 15.6 0.1 0.012 15.5 0.1 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 DUF4229 PF14012.6 NODE_79760_length_198_cov_2.184049_g71819_i0forward_frame_3 - 0.08 13.1 2.7 0.087 12.9 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) DUF1040 PF06288.13 NODE_79755_length_198_cov_2.208589_g71814_i0reverse_frame_2 - 9.7e-31 106.0 0.5 1e-30 105.9 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) Orthopox_F14 PF06076.12 NODE_79755_length_198_cov_2.208589_g71814_i0reverse_frame_2 - 0.031 14.5 0.6 0.041 14.1 0.1 1.5 2 0 0 2 2 2 0 Orthopoxvirus F14 protein Ribosomal_S14 PF00253.21 NODE_79754_length_198_cov_2.208589_g71813_i0reverse_frame_3 - 0.098 12.4 1.3 0.12 12.1 1.3 1.2 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e Tmemb_185A PF10269.9 NODE_79752_length_198_cov_2.220859_g71811_i0reverse_frame_3 - 0.037 13.7 0.5 0.042 13.5 0.5 1.1 1 0 0 1 1 1 0 Transmembrane Fragile-X-F protein FBA_3 PF08268.12 NODE_79752_length_198_cov_2.220859_g71811_i0forward_frame_3 - 0.037 14.0 0.2 0.046 13.7 0.2 1.1 1 0 0 1 1 1 0 F-box associated domain Toxin_6 PF05453.12 NODE_79747_length_198_cov_2.349693_g71806_i0forward_frame_2 - 0.046 14.2 4.4 0.077 13.4 4.4 1.3 1 0 0 1 1 1 0 BmTXKS1/BmP02 toxin family FAM198 PF15051.6 NODE_79746_length_198_cov_2.355828_g71805_i0forward_frame_2 - 0.031 13.1 0.1 0.032 13.1 0.1 1.0 1 0 0 1 1 1 0 FAM198 protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks384.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks384.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks384.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks384.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:29:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Lamprin PF06403.11 NODE_79744_length_198_cov_2.368098_g71803_i0forward_frame_2 - 0.17 11.8 2.7 0.2 11.6 2.7 1.2 1 0 0 1 1 1 0 Lamprin zf-C2H2_4 PF13894.6 NODE_79743_length_198_cov_2.374233_g71802_i0forward_frame_2 - 0.065 14.1 0.9 0.065 14.1 0.9 1.8 2 0 0 2 2 2 0 C2H2-type zinc finger Cas_Csy4 PF09618.10 NODE_79741_length_198_cov_2.404908_g71800_i0reverse_frame_3 - 0.16 12.1 1.2 0.17 12.0 1.2 1.0 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) Adaptin_N PF01602.20 NODE_79740_length_198_cov_2.411043_g71799_i0reverse_frame_3 - 1.5e-06 27.1 0.0 1.5e-06 27.1 0.0 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Iron_traffic PF04362.14 NODE_79730_length_198_cov_2.693252_g71789_i0forward_frame_2 - 0.02 14.5 0.1 0.024 14.3 0.1 1.1 1 0 0 1 1 1 0 Bacterial Fe(2+) trafficking Lpp-LpqN PF10738.9 NODE_79729_length_198_cov_2.699387_g71788_i0forward_frame_2 - 0.0014 18.1 0.0 0.0017 17.9 0.0 1.1 1 0 0 1 1 1 1 Probable lipoprotein LpqN DSBA PF01323.20 NODE_79729_length_198_cov_2.699387_g71788_i0forward_frame_2 - 0.0025 17.6 0.1 0.0029 17.4 0.1 1.1 1 0 0 1 1 1 1 DSBA-like thioredoxin domain RCR PF12273.8 NODE_79726_length_198_cov_2.723926_g71785_i0reverse_frame_3 - 0.17 12.6 0.0 0.18 12.5 0.0 1.1 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red Surp PF01805.20 NODE_79721_length_198_cov_2.809816_g71780_i0forward_frame_2 - 1.3e-19 69.9 0.2 1.5e-19 69.7 0.2 1.1 1 0 0 1 1 1 1 Surp module Mobilization_B PF17511.2 NODE_79718_length_198_cov_2.871166_g71777_i0forward_frame_2 - 0.1 12.9 0.5 0.18 12.1 0.4 1.5 1 1 0 1 1 1 0 Mobilization protein B ASC PF00858.24 NODE_79717_length_198_cov_2.914110_g71776_i0reverse_frame_3 - 0.12 11.4 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel CBP_BcsO PF17037.5 NODE_79715_length_198_cov_2.969325_g71774_i0reverse_frame_3 - 0.048 13.8 0.3 0.052 13.7 0.3 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsO tRNA-synt_His PF13393.6 NODE_79712_length_198_cov_3.085890_g71771_i0reverse_frame_3 - 4.2e-12 46.0 0.2 4.4e-12 45.9 0.2 1.0 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 NODE_79712_length_198_cov_3.085890_g71771_i0reverse_frame_3 - 2.1e-06 27.8 0.0 2.2e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) PD40 PF07676.12 NODE_79709_length_198_cov_3.625767_g71768_i0forward_frame_2 - 0.048 13.6 0.1 0.55 10.2 0.0 2.1 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat Rotavirus_VP1 PF12289.8 NODE_79707_length_198_cov_3.711656_g71766_i0forward_frame_2 - 0.04 13.0 0.1 0.046 12.8 0.1 1.0 1 0 0 1 1 1 0 Rotavirus VP1 C-terminal domain YMF19 PF02326.15 NODE_79699_length_198_cov_20.331288_g71758_i0reverse_frame_3 - 1.3 9.8 9.3 1.6 9.5 9.3 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 Glyco_hydro_65m PF03632.15 NODE_79683_length_198_cov_33.987730_g71742_i0reverse_frame_3 - 0.1 11.4 0.0 0.1 11.4 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 65 central catalytic domain DUF3165 PF11364.8 NODE_79683_length_198_cov_33.987730_g71742_i0reverse_frame_2 - 0.06 13.7 0.0 0.076 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3165) Qn_am_d_aIV PF09100.10 NODE_79683_length_198_cov_33.987730_g71742_i0forward_frame_3 - 0.092 12.6 0.1 0.092 12.6 0.1 1.1 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV NqrM PF04400.13 NODE_79681_length_198_cov_35.288344_g71740_i0reverse_frame_3 - 0.04 13.7 0.4 0.04 13.7 0.4 1.6 2 0 0 2 2 2 0 (Na+)-NQR maturation NqrM zinc_ribbon_10 PF10058.9 NODE_79681_length_198_cov_35.288344_g71740_i0forward_frame_2 - 0.2 11.4 1.9 0.32 10.7 1.9 1.2 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein GlcNAc-1_reg PF18440.1 NODE_79680_length_198_cov_35.564417_g71739_i0reverse_frame_2 - 0.099 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative GlcNAc-1 phosphotransferase regulatory domain DUF2997 PF11211.8 NODE_79668_length_198_cov_44.552147_g71727_i0forward_frame_2 - 0.21 11.4 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) 53-BP1_Tudor PF09038.10 NODE_79664_length_198_cov_46.122699_g71723_i0forward_frame_3 - 0.031 14.2 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 Tumour suppressor p53-binding protein-1 Tudor ETRAMP PF09716.10 NODE_79662_length_198_cov_47.122699_g71721_i0reverse_frame_2 - 0.034 14.2 1.8 0.032 14.3 1.8 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Deltaretro_Tax PF05599.11 NODE_79659_length_198_cov_54.907975_g71718_i0forward_frame_3 - 0.028 14.9 0.2 0.034 14.6 0.2 1.2 1 0 0 1 1 1 0 Deltaretrovirus Tax protein YecR PF13992.6 NODE_79658_length_198_cov_55.760736_g71717_i0reverse_frame_2 - 0.12 12.7 3.1 0.43 10.9 3.0 1.7 1 1 1 2 2 2 0 YecR-like lipoprotein Rrn6 PF10214.9 NODE_79657_length_198_cov_56.018405_g71716_i0forward_frame_2 - 0.087 11.3 0.7 0.079 11.4 0.7 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor PEPCK_GTP PF00821.18 NODE_79655_length_198_cov_56.398773_g71714_i0reverse_frame_3 - 0.077 11.8 0.0 0.077 11.8 0.0 1.0 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Jak1_Phl PF17887.1 NODE_79653_length_198_cov_58.613497_g71712_i0reverse_frame_3 - 0.011 15.7 0.6 0.011 15.7 0.6 1.0 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain DUF1493 PF07377.12 NODE_79652_length_198_cov_58.650307_g71711_i0reverse_frame_3 - 0.11 13.0 0.1 0.12 12.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) DUF2649 PF10854.8 NODE_79649_length_198_cov_63.085890_g71708_i0forward_frame_3 - 0.48 10.8 5.8 0.44 10.9 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2649) Bys1 PF04681.12 NODE_79635_length_198_cov_97.619632_g71694_i0reverse_frame_2 - 0.15 12.0 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Blastomyces yeast-phase-specific protein DUF3719 PF12516.8 NODE_79634_length_198_cov_120.337423_g71693_i0forward_frame_3 - 0.13 11.9 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) zf-C2H2_7 PF15269.6 NODE_79632_length_198_cov_141.024540_g71691_i0reverse_frame_2 - 0.0036 17.4 1.9 0.0052 16.8 1.9 1.3 1 0 0 1 1 1 1 Zinc-finger Toxin_33 PF08121.11 NODE_79632_length_198_cov_141.024540_g71691_i0reverse_frame_2 - 0.3 10.9 4.5 0.43 10.4 4.5 1.2 1 0 0 1 1 1 0 Waglerin family DUF3246 PF11596.8 NODE_79631_length_198_cov_144.030675_g71690_i0reverse_frame_2 - 0.12 11.7 1.9 0.14 11.6 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3246) S-AdoMet_synt_N PF00438.20 NODE_79630_length_198_cov_148.233129_g71689_i0forward_frame_2 - 1.6e-26 92.9 0.6 1.7e-26 92.8 0.6 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 NODE_79630_length_198_cov_148.233129_g71689_i0forward_frame_2 - 0.0033 16.3 0.1 0.0036 16.1 0.1 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) Pex2_Pex12 PF04757.14 NODE_79628_length_198_cov_182.993865_g71687_i0reverse_frame_2 - 0.062 12.9 0.5 0.067 12.8 0.5 1.1 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region DUF4312 PF14189.6 NODE_79622_length_198_cov_304.846626_g71681_i0forward_frame_3 - 0.16 12.0 1.0 0.27 11.2 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) SUIM_assoc PF16619.5 NODE_79621_length_198_cov_498.993865_g71680_i0reverse_frame_2 - 0.16 12.0 0.1 0.2 11.7 0.1 1.1 1 0 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 RAMP PF04901.13 NODE_79613_length_198_cov_4631.006135_g71672_i0forward_frame_3 - 0.012 15.6 0.2 0.012 15.6 0.2 1.1 1 0 0 1 1 1 0 Receptor activity modifying family CPSase_C PF18302.1 NODE_79613_length_198_cov_4631.006135_g71672_i0forward_frame_3 - 3.1 8.5 6.5 4.6 8.0 0.1 2.7 3 0 0 3 3 3 0 Carbamoyl phosphate synthetase C-terminal domain RXT2_N PF08595.11 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.13 12.3 6.9 0.14 12.2 6.9 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal FAM176 PF14851.6 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.35 10.5 5.8 0.38 10.4 5.8 1.1 1 0 0 1 1 1 0 FAM176 family NOA36 PF06524.12 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.87 8.8 13.6 0.87 8.8 13.6 1.0 1 0 0 1 1 1 0 NOA36 protein PBP1_TM PF14812.6 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.95 9.9 13.6 1.1 9.6 13.6 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal OAD_gamma PF04277.13 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.95 10.1 3.7 1.3 9.6 3.7 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF3295 PF11702.8 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 1.8 7.9 12.5 1.9 7.7 12.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) Cwf_Cwc_15 PF04889.12 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 2.2 8.0 15.1 2.2 7.9 15.1 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein TRAP_alpha PF03896.16 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 2.4 7.3 6.0 2.3 7.4 6.0 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Astro_capsid_p PF12226.8 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 2.7 7.0 10.5 2.9 7.0 10.5 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF2457 PF10446.9 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 6.1 5.9 16.2 5.8 6.0 16.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) RecO_N_2 PF13114.6 ORF99863 - 0.02 14.6 0.3 0.45 10.3 0.2 2.0 2 0 0 2 2 2 0 RecO N terminal Cnd3 PF12719.7 ORF99812 - 0.094 11.9 0.0 0.2 10.8 0.0 1.5 1 1 1 2 2 2 0 Nuclear condensing complex subunits, C-term domain PRIMA1 PF16101.5 ORF99249 - 5.8 7.0 10.0 6 6.9 10.0 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 IL1 PF00340.19 ORF99080 - 0.099 12.3 0.1 0.1 12.3 0.1 1.0 1 0 0 1 1 1 0 Interleukin-1 / 18 Nucleocap_ssRNA PF11128.8 ORF99080 - 0.12 12.1 0.0 0.13 12.0 0.0 1.0 1 0 0 1 1 1 0 Plant viral coat protein nucleocapsid NapB PF03892.14 ORF98978 - 0.0019 18.2 0.1 0.002 18.1 0.1 1.1 1 0 0 1 1 1 1 Nitrate reductase cytochrome c-type subunit (NapB) DUF4083 PF13314.6 ORF98901 - 0.4 10.7 2.2 0.6 10.1 2.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) zf-CpG_bind_C PF12269.8 ORF98901 - 2.6 7.8 8.4 2.6 7.8 8.4 1.0 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain APG6 PF04111.12 ORF98883 - 1.6e-12 47.8 0.0 1.8e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 Apg6 BARA domain DUF1953 PF09196.10 ORF98883 - 0.035 13.9 0.1 0.053 13.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1953) Ntox14 PF15522.6 ORF98883 - 0.14 11.5 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Novel toxin 14 Pterin_bind PF00809.22 ORF98846 - 9e-08 32.1 0.1 1.2e-07 31.6 0.1 1.2 1 0 0 1 1 1 1 Pterin binding enzyme SLATT_5 PF18160.1 ORF98544 - 0.0042 16.4 1.8 0.0045 16.3 1.8 1.0 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 5 DUF2046 PF09755.9 ORF98544 - 0.011 15.0 1.0 0.011 15.0 1.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) TSC22 PF01166.18 ORF98472 - 0.00023 21.4 3.9 0.034 14.5 0.3 2.1 1 1 1 2 2 2 2 TSC-22/dip/bun family UPF0242 PF06785.11 ORF98472 - 0.00093 19.4 4.1 0.00093 19.4 4.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Transcrip_act PF04949.13 ORF98472 - 0.001 19.0 0.7 0.0011 18.9 0.7 1.0 1 0 0 1 1 1 1 Transcriptional activator FPP PF05911.11 ORF98472 - 0.0013 17.0 1.1 0.0013 17.0 1.1 1.0 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil ADIP PF11559.8 ORF98472 - 0.0015 18.6 3.9 0.0017 18.5 3.9 1.0 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Herpes_BLRF2 PF05812.12 ORF98472 - 0.0031 17.6 2.5 0.026 14.7 2.5 2.0 1 1 0 1 1 1 1 Herpesvirus BLRF2 protein Cep57_CLD_2 PF14197.6 ORF98472 - 0.0037 17.3 5.1 0.083 13.0 0.7 2.1 2 0 0 2 2 2 2 Centrosome localisation domain of PPC89 DivIC PF04977.15 ORF98472 - 0.0074 16.0 7.2 0.29 10.9 0.2 2.1 1 1 0 2 2 2 2 Septum formation initiator Leu_zip PF15294.6 ORF98472 - 0.017 14.6 4.1 0.069 12.7 0.4 2.0 1 1 1 2 2 2 0 Leucine zipper TolA_bind_tri PF16331.5 ORF98472 - 0.03 14.4 3.2 0.21 11.7 1.3 2.0 1 1 1 2 2 2 0 TolA binding protein trimerisation bZIP_2 PF07716.15 ORF98472 - 0.033 14.3 3.1 3 8.0 0.1 2.1 2 0 0 2 2 2 0 Basic region leucine zipper PRKG1_interact PF15898.5 ORF98472 - 0.033 15.1 3.1 0.66 10.9 0.2 2.2 1 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain ZapB PF06005.12 ORF98472 - 0.046 14.2 6.4 1.3 9.5 6.4 2.0 1 1 0 1 1 1 0 Cell division protein ZapB Lebercilin PF15619.6 ORF98472 - 0.049 13.3 6.6 0.32 10.6 6.6 1.9 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease TcdA_TcdB_pore PF12920.7 ORF98472 - 0.084 11.1 1.9 0.098 10.9 1.9 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF2205 PF10224.9 ORF98472 - 0.15 12.1 0.6 0.15 12.1 0.6 2.0 1 1 1 2 2 2 0 Short coiled-coil protein bZIP_1 PF00170.21 ORF98472 - 0.25 11.5 5.0 15 5.8 5.0 2.1 1 1 0 1 1 1 0 bZIP transcription factor betaPIX_CC PF16523.5 ORF98472 - 0.25 11.2 4.0 0.78 9.6 3.9 1.8 1 1 0 1 1 1 0 betaPIX coiled coil Mto2_bdg PF12808.7 ORF98472 - 0.27 11.6 3.6 13 6.1 0.5 2.4 2 1 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region DASH_Dam1 PF08653.10 ORF98472 - 0.67 9.8 2.6 5.4 6.9 0.4 2.1 2 0 0 2 2 2 0 DASH complex subunit Dam1 Aa_trans PF01490.18 ORF98406 - 3.1e-07 29.5 2.5 3.5e-07 29.3 2.5 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein NS3_envE PF02723.14 ORF98099 - 0.085 12.9 3.5 0.096 12.8 3.5 1.1 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E DUF2631 PF10939.8 ORF97806 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) MORN PF02493.20 ORF97650 - 0.1 12.6 1.2 0.16 11.9 1.2 1.4 1 0 0 1 1 1 0 MORN repeat Phage_XkdX PF09693.10 ORF97650 - 0.72 9.9 7.9 0.12 12.4 3.1 1.9 2 0 0 2 2 2 0 Phage uncharacterised protein (Phage_XkdX) Phage_Integr_2 PF13009.6 ORF96906 - 0.14 11.2 0.2 0.29 10.2 0.0 1.5 1 1 1 2 2 2 0 Putative phage integrase OGFr_N PF04664.13 ORF96552 - 0.12 11.9 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 Opioid growth factor receptor (OGFr) conserved region DUF3437 PF11919.8 ORF96552 - 0.13 12.2 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DUF2990 PF11693.8 ORF9649 - 0.2 11.8 0.5 0.26 11.5 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2990) DNase_NucA_NucB PF14040.6 ORF95849 - 0.047 14.1 0.5 0.053 13.9 0.5 1.1 1 0 0 1 1 1 0 Deoxyribonuclease NucA/NucB zf-C5HC2 PF02928.16 ORF95737 - 0.039 14.3 1.3 0.053 13.9 1.3 1.1 1 0 0 1 1 1 0 C5HC2 zinc finger PfkB PF00294.24 ORF9568 - 2.3e-11 43.6 1.0 2.6e-11 43.4 1.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase NodS PF05401.11 ORF9568 - 0.079 12.6 0.4 0.087 12.4 0.4 1.0 1 0 0 1 1 1 0 Nodulation protein S (NodS) T6SS_TssG PF06996.11 ORF95453 - 0.046 13.0 0.1 0.046 13.0 0.1 1.0 1 0 0 1 1 1 0 Type VI secretion, TssG DUF5386 PF17360.2 ORF95453 - 0.095 12.6 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5386) DUF4781 PF16013.5 ORF94856 - 0.28 10.0 0.0 0.29 9.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) Antimicrobial13 PF08108.11 ORF94620 - 0.11 12.6 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 Halocidin family Peptidase_C1 PF00112.23 ORF94291 - 2.3e-09 37.7 2.8 2.5e-09 37.6 2.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease SRCR_2 PF15494.6 ORF94291 - 0.051 14.1 0.0 0.053 14.1 0.0 1.0 1 0 0 1 1 1 0 Scavenger receptor cysteine-rich domain Rep_fac-A_C PF08646.10 ORF94136 - 1.3e-05 24.9 0.8 1.6e-05 24.7 0.8 1.1 1 0 0 1 1 1 1 Replication factor-A C terminal domain REPA_OB_2 PF16900.5 ORF94135 - 3e-08 33.5 0.0 3.1e-08 33.4 0.0 1.0 1 0 0 1 1 1 1 Replication protein A OB domain Pep_M12B_propep PF01562.19 ORF93851 - 0.23 11.7 0.0 0.27 11.5 0.0 1.1 1 0 0 1 1 1 0 Reprolysin family propeptide MerE PF05052.12 ORF9310 - 0.032 14.1 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 MerE protein DUF2630 PF10944.8 ORF9310 - 0.2 12.1 0.4 0.25 11.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) Sid-5 PF17204.3 ORF9289 - 0.041 14.1 0.2 0.062 13.5 0.2 1.5 1 1 0 1 1 1 0 Sid-5 family DUF4478 PF14793.6 ORF92733 - 0.12 12.2 0.1 0.19 11.7 0.1 1.3 1 1 0 1 1 1 0 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Pro-MCH PF05824.12 ORF92634 - 0.07 13.1 1.2 0.12 12.3 1.2 1.3 1 0 0 1 1 1 0 Pro-melanin-concentrating hormone (Pro-MCH) Arena_ncap_C PF17290.2 ORF92592 - 0.042 13.2 1.0 0.041 13.2 1.0 1.1 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain Codanin-1_C PF15296.6 ORF92537 - 0.0024 17.9 0.6 0.0027 17.8 0.6 1.1 1 0 0 1 1 1 1 Codanin-1 C-terminus Phage_TAC_6 PF09550.10 ORF92019 - 0.028 14.9 0.9 0.12 12.9 0.0 2.0 2 0 0 2 2 2 0 Phage tail assembly chaperone protein, TAC DUF4719 PF15843.5 ORF91949 - 0.17 12.0 0.4 0.18 11.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) CutA1 PF03091.15 ORF90722 - 0.12 12.3 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 CutA1 divalent ion tolerance protein zf_ZIC PF18366.1 ORF90679 - 0.091 12.9 0.9 0.14 12.3 0.9 1.3 1 0 0 1 1 1 0 Zic proteins zinc finger domain Pkinase PF00069.25 ORF9001 - 7.8e-06 25.4 0.0 8e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Dermcidin PF15291.6 ORF89466 - 0.19 12.3 0.0 0.19 12.3 0.0 1.1 1 0 0 1 1 1 0 Dermcidin, antibiotic peptide PsbT PF01405.17 ORF89327 - 0.03 14.1 0.9 0.03 14.1 0.9 1.9 2 0 0 2 2 2 0 Photosystem II reaction centre T protein DUF3624 PF12292.8 ORF89326 - 1.5 9.3 3.7 3.4 8.1 3.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3624) CTX_RstB PF07459.11 ORF89281 - 0.0041 17.3 0.0 0.0044 17.2 0.0 1.1 1 0 0 1 1 1 1 CTX phage RstB protein PsbP PF01789.16 ORF89281 - 0.0056 16.8 0.0 0.0063 16.7 0.0 1.1 1 0 0 1 1 1 1 PsbP Fmp27_WPPW PF10359.9 ORF88653 - 0.063 12.1 0.2 0.069 12.0 0.2 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Antimicrobial13 PF08108.11 ORF883 - 0.11 12.6 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 Halocidin family Mfa1 PF17445.2 ORF88206 - 0.5 10.4 9.8 0.095 12.7 6.2 1.7 1 1 1 2 2 2 0 Mating factor A1 DnaJ-X PF14308.6 ORF87904 - 0.035 13.5 6.6 0.04 13.4 6.6 1.0 1 0 0 1 1 1 0 X-domain of DnaJ-containing DUF349 PF03993.12 ORF87904 - 0.39 11.1 9.3 0.44 10.9 9.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF349) Sec62 PF03839.16 ORF87904 - 3.4 7.1 8.8 3.4 7.1 8.8 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 O-antigen_lig PF13425.6 ORF87904 - 3.5 6.3 5.4 3.2 6.4 5.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Arm_3 PF16186.5 ORF87900 - 0.06 12.9 0.0 0.079 12.5 0.0 1.2 1 0 0 1 1 1 0 Atypical Arm repeat LisH PF08513.11 ORF87900 - 0.12 12.4 0.5 1.8 8.7 0.0 2.3 2 0 0 2 2 2 0 LisH AP_endonuc_2 PF01261.24 ORF87853 - 0.066 12.6 0.0 0.066 12.6 0.0 1.2 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel DUF3830 PF12903.7 ORF87853 - 0.18 11.5 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3830) FtsH_ext PF06480.15 ORF87853 - 0.21 12.0 0.0 0.21 12.0 0.0 1.1 1 0 0 1 1 1 0 FtsH Extracellular VirDNA-topo-I_N PF09266.10 ORF87465 - 0.078 13.1 0.0 0.11 12.7 0.0 1.4 1 1 0 1 1 1 0 Viral DNA topoisomerase I, N-terminal CITED PF04487.12 ORF87450 - 0.081 13.0 0.0 0.083 13.0 0.0 1.0 1 0 0 1 1 1 0 CITED YrhC PF14143.6 ORF87247 - 0.081 13.0 0.2 0.14 12.3 0.2 1.4 1 0 0 1 1 1 0 YrhC-like protein YrhK PF14145.6 ORF87247 - 0.19 11.6 5.2 0.85 9.5 5.2 2.0 1 1 0 1 1 1 0 YrhK-like protein Ldr_toxin PF13940.6 ORF87130 - 2.8e-26 91.3 2.5 3.7e-26 90.9 2.5 1.2 1 0 0 1 1 1 1 Toxin Ldr, type I toxin-antitoxin system DUF957 PF06117.11 ORF86431 - 1.1e-32 111.3 1.5 1.3e-32 111.1 1.5 1.1 1 0 0 1 1 1 1 Enterobacterial protein of unknown function (DUF957) DUF3314 PF11771.8 ORF86001 - 0.076 13.1 0.1 0.087 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3314) Borrelia_rep PF03183.13 ORF86001 - 2.5 8.3 7.7 0.31 11.1 3.3 1.9 2 0 0 2 2 2 0 Borrelia repeat protein Activator_LAG-3 PF11498.8 ORF8598 - 0.4 9.6 2.6 0.39 9.6 2.6 1.0 1 0 0 1 1 1 0 Transcriptional activator LAG-3 Rabaptin PF03528.15 ORF85907 - 0.04 12.6 0.0 0.046 12.4 0.0 1.0 1 0 0 1 1 1 0 Rabaptin SLATT_2 PF18183.1 ORF85169 - 0.034 13.9 0.1 0.036 13.9 0.1 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 2 Luteo_Vpg PF01659.16 ORF85099 - 0.018 15.3 0.5 0.022 15.1 0.5 1.0 1 0 0 1 1 1 0 Luteovirus putative VPg genome linked protein Mei5_like PF17021.5 ORF84935 - 0.05 13.7 1.0 0.061 13.4 1.0 1.1 1 0 0 1 1 1 0 Putative double-strand recombination repair-like HlyC PF02794.16 ORF84445 - 0.13 12.2 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 RTX toxin acyltransferase family Antimicrobial13 PF08108.11 ORF84106 - 0.11 12.6 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 Halocidin family DUF1688 PF07958.11 ORF84103 - 0.14 10.8 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1688) BLF1 PF17752.1 ORF82591 - 0.07 12.4 0.0 0.088 12.1 0.0 1.1 1 0 0 1 1 1 0 Burkholderia lethal factor 1 DUF35_N PF12172.8 ORF82437 - 0.24 11.3 0.4 0.24 11.3 0.4 2.9 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Dexa_ind PF15198.6 ORF82197 - 0.095 12.8 4.1 0.1 12.7 4.1 1.1 1 0 0 1 1 1 0 Dexamethasone-induced Antimicrobial_1 PF08018.11 ORF81762 - 0.24 11.6 0.1 0.24 11.6 0.1 1.6 2 0 0 2 2 2 0 Frog antimicrobial peptide DUF899 PF05988.12 ORF81366 - 0.22 11.0 0.0 0.22 11.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) CBS PF00571.28 ORF81061 - 0.041 14.3 0.0 0.07 13.6 0.0 1.4 1 1 0 1 1 1 0 CBS domain DHHC PF01529.20 ORF80906 - 3.5e-08 33.6 0.3 3.6e-08 33.6 0.3 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase Na_K-ATPase PF00287.18 ORF80906 - 0.54 9.4 1.5 0.53 9.4 1.5 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Spore_YhaL PF14147.6 ORF80808 - 0.11 12.2 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Sporulation protein YhaL Acyl-CoA_dh_M PF02770.19 ORF80758 - 0.061 13.5 0.0 0.087 13.0 0.0 1.3 1 1 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain BRX PF08381.11 ORF80475 - 0.0021 17.4 0.0 0.0031 16.9 0.0 1.3 1 0 0 1 1 1 1 Transcription factor regulating root and shoot growth via Pin3 MORN PF02493.20 ORF80347 - 4.2e-15 54.6 25.3 2.1e-08 33.6 1.9 3.9 4 0 0 4 4 4 3 MORN repeat ABC_tran PF00005.27 ORF80147 - 4.3e-06 27.3 0.0 4.3e-06 27.3 0.0 1.0 1 0 0 1 1 1 1 ABC transporter FeoB_associated PF12669.7 ORF79871 - 0.087 13.2 4.0 0.13 12.6 4.0 1.4 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein DUF4478 PF14793.6 ORF79652 - 0.12 12.2 0.1 0.19 11.7 0.1 1.3 1 1 0 1 1 1 0 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Fmp27_WPPW PF10359.9 ORF79513 - 0.063 12.1 0.2 0.069 12.0 0.2 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF3969 PF13108.6 ORF79496 - 0.0041 17.1 0.0 0.0041 17.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3969) MIX PF18529.1 ORF79291 - 0.03 14.0 0.1 0.031 14.0 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins Arm PF00514.23 ORF79291 - 0.075 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Armadillo/beta-catenin-like repeat Vps4_C PF09336.10 ORF79279 - 0.16 12.0 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain Crust_neuro_H PF03858.13 ORF78997 - 0.17 12.7 1.5 3.7 8.4 0.1 2.2 2 0 0 2 2 2 0 Crustacean neurohormone H SLC3A2_N PF16028.5 ORF7871 - 0.042 13.4 0.5 0.054 13.0 0.5 1.2 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus DUF2631 PF10939.8 ORF78582 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) SNARE_assoc PF09335.11 ORF78407 - 0.027 14.9 1.1 0.027 14.9 1.1 1.8 2 0 0 2 2 2 0 SNARE associated Golgi protein DDDD PF10161.9 ORF78407 - 0.19 11.5 0.1 0.27 11.0 0.1 1.3 1 0 0 1 1 1 0 Putative mitochondrial precursor protein LANC_like PF05147.13 ORF76793 - 0.00027 19.6 0.0 0.00028 19.6 0.0 1.0 1 0 0 1 1 1 1 Lanthionine synthetase C-like protein Herpes_pp85 PF04637.12 ORF76433 - 6.5 5.0 6.7 6.3 5.1 6.7 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Antimicrobial13 PF08108.11 ORF75996 - 0.11 12.6 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 Halocidin family Cir_Bir_Yir PF06022.11 ORF75885 - 0.011 15.2 1.3 0.012 15.2 1.3 1.0 1 0 0 1 1 1 0 Plasmodium variant antigen protein Cir/Yir/Bir DUF302 PF03625.14 ORF75431 - 0.014 15.3 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF302 DUF5472 PF17566.2 ORF75244 - 0.026 14.5 0.6 0.035 14.1 0.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5472) DUF596 PF04591.12 ORF74894 - 0.045 13.9 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF596 Phage_Gp23 PF10669.9 ORF74500 - 10 6.5 8.6 12 6.3 8.6 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) Auxin_resp PF06507.13 ORF74299 - 0.048 13.9 0.5 0.057 13.7 0.5 1.2 1 0 0 1 1 1 0 Auxin response factor Ribosomal_L4 PF00573.22 ORF7426 - 0.17 11.6 0.3 0.19 11.4 0.3 1.0 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family DUF3975 PF13126.6 ORF74082 - 0.15 12.5 3.7 0.18 12.3 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) Imm53 PF15580.6 ORF73931 - 0.053 13.2 0.0 0.063 13.0 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 53 HCV_NS5a_C PF12941.7 ORF73107 - 0.1 12.4 1.6 0.12 12.2 1.6 1.0 1 0 0 1 1 1 0 HCV NS5a protein C-terminal region LacI PF00356.21 ORF73032 - 0.74 9.7 5.8 21 5.0 0.3 3.7 2 2 1 3 3 3 0 Bacterial regulatory proteins, lacI family Antimicrobial13 PF08108.11 ORF72993 - 0.11 12.6 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 Halocidin family Antimicrobial13 PF08108.11 ORF72950 - 0.11 12.6 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 Halocidin family L_biotic_typeA PF04604.13 ORF72582 - 0.094 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Type-A lantibiotic PH_RBD PF12068.8 ORF72438 - 0.086 12.3 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 Rab-binding domain (RBD) PPR_2 PF13041.6 ORF72389 - 6.1e-05 23.1 0.0 7.3e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 PPR repeat family RALF PF05498.11 ORF72304 - 0.0057 17.6 0.1 0.0082 17.1 0.1 1.3 1 0 0 1 1 1 1 Rapid ALkalinization Factor (RALF) DUF347 PF03988.12 ORF71286 - 0.0016 18.6 0.2 0.002 18.3 0.2 1.0 1 0 0 1 1 1 1 Repeat of Unknown Function (DUF347) MFS_Mycoplasma PF07672.13 ORF71286 - 0.01 15.2 0.0 0.01 15.2 0.0 1.0 1 0 0 1 1 1 0 Mycoplasma MFS transporter CRIM PF16978.5 ORF71286 - 0.011 15.8 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 0 SAPK-interacting protein 1 (Sin1), middle CRIM domain DUF2207 PF09972.9 ORF71286 - 0.012 14.4 0.0 0.012 14.4 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TssO PF17561.2 ORF71286 - 0.042 14.0 0.2 0.051 13.7 0.2 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO Thioredoxin_11 PF18078.1 ORF71238 - 0.007 16.5 1.1 0.0077 16.4 1.1 1.0 1 0 0 1 1 1 1 Thioredoxin-like SNTX domain CRF-BP PF05428.11 ORF71216 - 0.14 11.0 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) Chordopox_RPO7 PF05864.12 ORF71213 - 0.018 15.3 0.2 0.024 14.9 0.2 1.1 1 0 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) ThrE PF06738.12 ORF71213 - 0.046 13.1 0.2 0.046 13.1 0.2 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter Rimk_N PF18030.1 ORF71196 - 0.055 13.9 0.0 0.055 13.9 0.0 1.2 1 0 0 1 1 1 0 RimK PreATP-grasp domain Hap4_Hap_bind PF10297.9 ORF71191 - 9.7 6.5 7.6 1.4 9.1 0.3 2.8 3 0 0 3 3 3 0 Minimal binding motif of Hap4 for binding to Hap2/3/5 PSII_Pbs27 PF13326.6 ORF71021 - 0.0016 18.8 0.1 0.0017 18.6 0.1 1.0 1 0 0 1 1 1 1 Photosystem II Pbs27 PL48 PF15903.5 ORF71021 - 0.0033 16.4 0.3 0.0033 16.4 0.3 1.0 1 0 0 1 1 1 1 Filopodia upregulated, FAM65 SLY PF12485.8 ORF70852 - 0.027 15.2 4.8 0.027 15.2 4.8 1.0 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein PhdYeFM_antitox PF02604.19 ORF70630 - 0.17 11.7 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system MNNL PF07657.13 ORF69795 - 0.038 14.0 0.1 0.045 13.8 0.1 1.1 1 0 0 1 1 1 0 N terminus of Notch ligand COX7C PF02935.16 ORF69429 - 0.017 15.4 1.1 0.019 15.2 1.1 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc ABC_tran PF00005.27 ORF67561 - 9.7e-09 35.9 0.1 1e-08 35.8 0.1 1.0 1 0 0 1 1 1 1 ABC transporter DUF87 PF01935.17 ORF67561 - 0.0045 17.1 0.2 0.0049 17.0 0.2 1.1 1 0 0 1 1 1 1 Helicase HerA, central domain MMR_HSR1 PF01926.23 ORF67561 - 0.01 15.9 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF67561 - 0.012 15.3 0.2 0.017 14.8 0.2 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain TrwB_AAD_bind PF10412.9 ORF67561 - 0.04 12.8 0.1 0.044 12.7 0.1 1.0 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_7 PF12775.7 ORF67561 - 0.041 13.4 0.3 0.081 12.4 0.3 1.5 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_21 PF13304.6 ORF67561 - 0.08 12.7 0.2 0.091 12.6 0.2 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF67561 - 0.1 12.0 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family MeaB PF03308.16 ORF67561 - 0.11 11.5 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 ORF67561 - 0.16 11.7 0.2 0.21 11.3 0.2 1.1 1 0 0 1 1 1 0 AAA domain DUF1810 PF08837.11 ORF67391 - 0.047 13.5 0.0 0.055 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1810) DUF2534 PF10749.9 ORF67391 - 0.055 13.6 0.0 0.083 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2534) CTP-dep_RFKase PF01982.16 ORF67391 - 0.097 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF120 DUF4887 PF16228.5 ORF67204 - 0.0032 17.7 0.1 0.0033 17.6 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4887) BRX PF08381.11 ORF66919 - 0.0021 17.4 0.0 0.0031 16.9 0.0 1.3 1 0 0 1 1 1 1 Transcription factor regulating root and shoot growth via Pin3 MRJP PF03022.16 ORF66906 - 0.06 12.7 0.1 0.068 12.5 0.1 1.0 1 0 0 1 1 1 0 Major royal jelly protein PseudoU_synth_2 PF00849.22 ORF66858 - 0.04 14.0 0.1 0.051 13.7 0.1 1.2 1 0 0 1 1 1 0 RNA pseudouridylate synthase NRDE-2 PF08424.10 ORF66699 - 0.08 12.0 0.0 0.084 12.0 0.0 1.0 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference DUF2757 PF10955.8 ORF66699 - 0.093 13.0 0.1 0.11 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2757) Neur_chan_memb PF02932.16 ORF66117 - 0.021 14.9 0.2 0.026 14.6 0.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3961 PF13106.6 ORF66072 - 0.26 10.9 2.8 7.5 6.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3961) DUF2418 PF10332.9 ORF66072 - 0.66 10.5 5.3 0.84 10.2 5.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) Hpre_diP_synt_I PF07456.11 ORF65048 - 0.098 12.7 4.7 0.098 12.7 4.7 1.0 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase component I Orthoreo_P10 PF07204.11 ORF64877 - 0.0058 16.6 0.1 0.0062 16.5 0.1 1.2 1 0 0 1 1 1 1 Orthoreovirus membrane fusion protein p10 Pmp3 PF01679.17 ORF64877 - 0.16 12.2 0.4 0.16 12.2 0.4 1.8 2 0 0 2 2 2 0 Proteolipid membrane potential modulator Thiolase_C PF02803.18 ORF64720 - 4.2e-27 94.2 1.0 4.6e-27 94.1 1.0 1.0 1 0 0 1 1 1 1 Thiolase, C-terminal domain DUF809 PF05663.11 ORF64604 - 0.1 12.8 0.0 0.12 12.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF809) MerE PF05052.12 ORF6452 - 0.032 14.1 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 MerE protein DUF2630 PF10944.8 ORF6452 - 0.2 12.1 0.4 0.25 11.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) DUF3314 PF11771.8 ORF64472 - 0.076 13.1 0.1 0.087 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3314) Borrelia_rep PF03183.13 ORF64472 - 2.5 8.3 7.7 0.31 11.1 3.3 1.9 2 0 0 2 2 2 0 Borrelia repeat protein DUF3287 PF11690.8 ORF6351 - 0.074 12.8 0.1 0.08 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) RSN1_7TM PF02714.15 ORF63388 - 0.16 11.2 4.5 0.17 11.2 4.5 1.0 1 0 0 1 1 1 0 Calcium-dependent channel, 7TM region, putative phosphate Clc-like PF07062.12 ORF63067 - 0.35 10.3 4.6 0.41 10.1 4.6 1.1 1 0 0 1 1 1 0 Clc-like Peptidase_U4 PF03419.13 ORF63067 - 0.38 10.0 8.7 0.41 9.9 8.7 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA DUF5404 PF17397.2 ORF62447 - 0.12 12.5 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5404) DUF4658 PF15555.6 ORF623 - 0.078 13.1 0.1 0.081 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) Ank_5 PF13857.6 ORF62294 - 0.026 14.9 0.0 0.04 14.2 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) HipN PF18253.1 ORF6140 - 0.0025 17.4 0.1 0.0046 16.6 0.1 1.5 1 0 0 1 1 1 1 Hsp70-interacting protein N N-terminal domain Bee_toxin PF17454.2 ORF60410 - 0.14 12.2 0.9 0.14 12.2 0.9 1.5 2 0 0 2 2 2 0 Honey bee toxin SNARE_assoc PF09335.11 ORF59937 - 0.027 14.9 1.1 0.027 14.9 1.1 1.8 2 0 0 2 2 2 0 SNARE associated Golgi protein DDDD PF10161.9 ORF59937 - 0.19 11.5 0.1 0.27 11.0 0.1 1.3 1 0 0 1 1 1 0 Putative mitochondrial precursor protein Peptidase_S10 PF00450.22 ORF59573 - 2.4e-11 43.7 0.0 2.7e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase BRX PF08381.11 ORF58858 - 0.0021 17.4 0.0 0.0031 16.9 0.0 1.3 1 0 0 1 1 1 1 Transcription factor regulating root and shoot growth via Pin3 Orf78 PF06024.12 ORF58682 - 0.0032 17.7 0.1 0.0036 17.6 0.1 1.2 1 0 0 1 1 1 1 Orf78 (ac78) DUF3270 PF11674.8 ORF58682 - 0.55 10.4 6.5 0.67 10.2 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) PRIMA1 PF16101.5 ORF58531 - 5.8 7.0 10.0 6 6.9 10.0 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 DUF5472 PF17566.2 ORF58464 - 1.1 9.3 3.8 0.81 9.7 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5472) FPL PF09758.9 ORF57909 - 0.013 15.5 2.8 0.014 15.4 2.8 1.0 1 0 0 1 1 1 0 Uncharacterised conserved protein NitrOD5 PF11537.8 ORF57909 - 0.096 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Nitrosopumilus output domain 5 VirArc_Nuclease PF12187.8 ORF57864 - 0.12 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Viral/Archaeal nuclease DUF3342 PF11822.8 ORF57469 - 3.5e-21 75.2 0.4 3.8e-21 75.1 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) BTB PF00651.31 ORF57469 - 0.0033 17.6 0.1 0.0035 17.6 0.1 1.0 1 0 0 1 1 1 1 BTB/POZ domain FeoB_associated PF12669.7 ORF56885 - 0.087 13.2 4.0 0.13 12.6 4.0 1.4 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein PSD1 PF07587.11 ORF56179 - 0.047 13.2 0.0 0.053 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1553) SUKH-4 PF14435.6 ORF55263 - 0.1 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 SUKH-4 immunity protein Fumarate_red_D PF02313.17 ORF55040 - 0.11 12.6 1.2 0.11 12.6 1.2 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit D Rho_Binding PF08912.11 ORF54984 - 0.049 14.4 5.9 0.062 14.1 5.9 1.3 1 0 0 1 1 1 0 Rho Binding # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks385.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks385.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks385.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks385.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HTH_18 PF12833.7 ORF54172 - 7.9e-07 29.3 0.0 9.1e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF54172 - 1.2e-06 28.4 0.0 1.7e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family Terminase_5 PF06056.12 ORF54172 - 0.011 15.6 0.0 0.027 14.4 0.0 1.6 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) LytR_cpsA_psr PF03816.14 ORF54172 - 0.14 12.3 0.0 0.14 12.3 0.0 1.0 1 0 0 1 1 1 0 Cell envelope-related transcriptional attenuator domain DUF2631 PF10939.8 ORF53952 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) DUF2014 PF09427.10 ORF53500 - 0.14 11.4 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2014) Antimicrobial13 PF08108.11 ORF53381 - 0.11 12.6 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 Halocidin family DUF2534 PF10749.9 ORF53113 - 0.055 13.6 1.7 0.065 13.4 1.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2534) DUF2750 PF11042.8 ORF52910 - 0.13 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2750) Phe_ZIP PF08916.11 ORF52663 - 0.31 11.8 2.7 0.33 11.7 0.5 1.9 1 1 1 2 2 2 0 Phenylalanine zipper Ish1 PF10281.9 ORF52380 - 0.0032 17.7 0.5 0.15 12.4 0.1 2.2 2 0 0 2 2 2 2 Putative stress-responsive nuclear envelope protein RBD-FIP PF09457.10 ORF52380 - 0.13 12.2 3.3 0.27 11.2 0.5 2.2 2 0 0 2 2 2 0 FIP domain DUF2518 PF10726.9 ORF51966 - 0.18 11.4 0.2 0.19 11.4 0.2 1.1 1 0 0 1 1 1 0 Protein of function (DUF2518) RGS_DHEX PF18148.1 ORF51583 - 0.12 12.6 0.0 0.12 12.5 0.0 1.0 1 0 0 1 1 1 0 Regulator of G-protein signalling DHEX domain TPR_2 PF07719.17 ORF51395 - 0.006 16.6 0.5 0.012 15.6 0.1 1.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF51395 - 0.13 12.7 0.5 0.21 12.1 0.0 1.8 2 1 0 2 2 2 0 Tetratricopeptide repeat HHA PF05321.11 ORF51055 - 0.19 12.0 0.0 0.29 11.5 0.0 1.3 1 0 0 1 1 1 0 Haemolysin expression modulating protein Lyase_8_C PF02884.17 ORF50874 - 0.055 13.9 0.4 0.38 11.2 0.1 1.9 1 1 1 2 2 2 0 Polysaccharide lyase family 8, C-terminal beta-sandwich domain DUF883 PF05957.13 ORF50788 - 0.057 14.0 0.1 0.07 13.7 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CYSTM PF12734.7 ORF50617 - 0.1 12.9 3.1 0.22 11.9 3.1 1.6 1 0 0 1 1 1 0 Cysteine-rich TM module stress tolerance DUF5472 PF17566.2 ORF50221 - 1.1 9.3 3.8 0.81 9.7 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5472) Ras PF00071.22 ORF50102 - 1.2e-22 80.3 0.2 1.3e-22 80.2 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF50102 - 3.6e-16 59.5 0.2 3.8e-16 59.4 0.2 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF50102 - 0.00015 21.3 0.1 0.00015 21.2 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family DUF2631 PF10939.8 ORF50019 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) DUF2682 PF10909.8 ORF49913 - 0.053 14.0 0.2 0.069 13.6 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2682) DUF2631 PF10939.8 ORF49793 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) Ribosomal_L29 PF00831.23 ORF49777 - 0.089 12.8 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Ribosomal L29 protein Synaptobrevin PF00957.21 ORF49435 - 0.037 13.8 0.1 0.041 13.7 0.1 1.1 1 0 0 1 1 1 0 Synaptobrevin DUF2990 PF11693.8 ORF48777 - 0.2 11.8 0.5 0.26 11.5 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2990) HEPN_Cthe2314 PF18730.1 ORF47675 - 0.0076 16.3 0.1 0.0076 16.3 0.1 1.1 1 0 0 1 1 1 1 Cthe_2314-like HEPN HTH_7 PF02796.15 ORF47637 - 0.011 15.8 0.0 0.02 15.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Phage_AlpA PF05930.12 ORF47637 - 0.031 14.1 0.0 0.046 13.6 0.0 1.4 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) HTH_23 PF13384.6 ORF47637 - 0.036 13.9 0.1 0.071 12.9 0.1 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.6 ORF47637 - 0.038 14.0 0.0 0.071 13.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Ppx-GppA PF02541.16 ORF4688 - 0.14 11.6 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Ppx/GppA phosphatase family Spp-24 PF07448.11 ORF46863 - 0.033 14.4 0.9 0.045 13.9 0.8 1.3 1 1 0 1 1 1 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain DNA_ligase_ZBD PF03119.16 ORF46727 - 0.059 13.4 0.1 0.071 13.1 0.1 1.3 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain DUF1644 PF07800.12 ORF46727 - 0.1 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) TauE PF01925.19 ORF46376 - 1.8e-06 27.8 1.5 1.9e-06 27.7 1.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF4513 PF14983.6 ORF46346 - 0.041 14.0 0.2 0.048 13.7 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4513) FSH1 PF03959.13 ORF46338 - 0.038 13.7 0.1 0.041 13.5 0.1 1.0 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Ge1_WD40 PF16529.5 ORF46139 - 0.0026 16.8 0.1 0.0026 16.8 0.1 1.0 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40 PF00400.32 ORF46139 - 0.0026 18.5 0.0 0.0065 17.3 0.0 1.6 2 0 0 2 2 2 1 WD domain, G-beta repeat DUF3314 PF11771.8 ORF4601 - 0.076 13.1 0.1 0.087 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3314) Borrelia_rep PF03183.13 ORF4601 - 2.5 8.3 7.7 0.31 11.1 3.3 1.9 2 0 0 2 2 2 0 Borrelia repeat protein DUF3955 PF13127.6 ORF45839 - 0.0088 15.8 2.7 0.012 15.5 2.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3955) Folliculin PF11704.8 ORF45460 - 0.041 13.8 0.2 0.048 13.5 0.2 1.0 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport GST_C_3 PF14497.6 ORF45293 - 0.04 14.1 0.1 0.051 13.8 0.1 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain TRI5 PF06330.11 ORF45288 - 0.07 12.0 0.3 0.071 12.0 0.3 1.0 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) DSPc PF00782.20 ORF44665 - 1.4e-05 25.0 0.1 2e-05 24.4 0.1 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PRIMA1 PF16101.5 ORF44659 - 5.8 7.0 10.0 6 6.9 10.0 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Chitin_synth_2 PF03142.15 ORF44418 - 2.6e-05 23.0 0.0 2.7e-05 23.0 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF44418 - 0.0006 19.8 0.1 0.00069 19.6 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF44418 - 0.0053 16.7 0.0 0.0063 16.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 zf-RING_11 PF17123.5 ORF44220 - 0.036 13.8 0.1 0.071 12.9 0.1 1.5 1 0 0 1 1 1 0 RING-like zinc finger Kinesin PF00225.23 ORF44197 - 0.042 12.8 0.1 0.052 12.5 0.1 1.1 1 0 0 1 1 1 0 Kinesin motor domain DEAD PF00270.29 ORF44140 - 2.4e-14 53.5 0.1 2.5e-14 53.4 0.1 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase HTH_43 PF09904.9 ORF43698 - 0.099 12.6 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn helix Srg PF02118.21 ORF43488 - 0.0023 17.6 1.5 0.0025 17.6 1.5 1.1 1 0 0 1 1 1 1 Srg family chemoreceptor DUF4469 PF14734.6 ORF43229 - 0.18 12.0 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4469) with IG-like fold Caveolin PF01146.17 ORF42786 - 0.079 12.9 4.8 0.095 12.7 4.8 1.1 1 0 0 1 1 1 0 Caveolin DUF4239 PF14023.6 ORF42786 - 1.4 8.6 5.4 1.5 8.5 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) Bax1-I PF01027.20 ORF42650 - 5.4e-11 42.7 5.6 5.8e-11 42.6 5.6 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 RepB PF07506.11 ORF4260 - 0.12 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 RepB plasmid partitioning protein PhdYeFM_antitox PF02604.19 ORF42589 - 0.17 11.7 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system DHHC PF01529.20 ORF42482 - 3.5e-08 33.6 0.3 3.6e-08 33.6 0.3 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase Na_K-ATPase PF00287.18 ORF42482 - 0.54 9.4 1.5 0.53 9.4 1.5 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Synaptobrevin PF00957.21 ORF42194 - 0.037 13.8 0.1 0.041 13.7 0.1 1.1 1 0 0 1 1 1 0 Synaptobrevin DUF2631 PF10939.8 ORF42136 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) HEPN_Cthe2314 PF18730.1 ORF42011 - 0.0037 17.3 0.3 0.0037 17.3 0.3 1.1 1 0 0 1 1 1 1 Cthe_2314-like HEPN Toxin_29 PF08116.11 ORF4187 - 0.061 13.3 0.2 0.061 13.3 0.2 1.6 2 0 0 2 2 2 0 PhTx neurotoxin family DUF2299 PF10061.9 ORF4146 - 0.013 15.2 0.1 0.014 15.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2299) Borrelia_orfD PF02999.14 ORF4146 - 0.056 13.8 0.1 0.056 13.8 0.1 1.1 1 0 0 1 1 1 0 Borrelia orf-D family YceG_bac PF14266.6 ORF41062 - 0.06 12.3 0.1 0.1 11.5 0.0 1.4 1 1 1 2 2 2 0 Putative component of 'biosynthetic module' KIP1 PF07765.12 ORF41062 - 0.14 12.3 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 KIP1-like protein NinB PF05772.12 ORF40473 - 0.0088 15.9 0.2 0.0096 15.7 0.2 1.1 1 0 0 1 1 1 1 NinB protein PARG_cat PF05028.14 ORF40473 - 0.044 13.1 0.3 0.048 12.9 0.3 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) Oxidored_molyb PF00174.19 ORF40461 - 0.055 13.1 0.0 0.058 13.0 0.0 1.0 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain HCV_NS5a_C PF12941.7 ORF40264 - 0.1 12.4 1.6 0.12 12.2 1.6 1.0 1 0 0 1 1 1 0 HCV NS5a protein C-terminal region LPP PF04728.13 ORF40159 - 0.009 16.4 0.5 0.54 10.7 0.4 2.1 1 1 1 2 2 2 1 Lipoprotein leucine-zipper KASH_CCD PF14662.6 ORF40159 - 0.0096 15.8 3.0 0.012 15.5 3.0 1.1 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH BRE1 PF08647.11 ORF40159 - 0.036 14.1 5.3 0.063 13.4 5.3 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase SecA_DEAD PF07517.14 ORF40159 - 0.043 13.1 1.9 0.05 12.9 1.9 1.0 1 0 0 1 1 1 0 SecA DEAD-like domain HlyD_2 PF12700.7 ORF40159 - 0.082 11.6 5.4 0.087 11.5 5.4 1.0 1 0 0 1 1 1 0 HlyD family secretion protein ABC_tran_CTD PF16326.5 ORF40159 - 0.099 12.9 2.5 0.27 11.5 2.5 1.7 1 1 0 1 1 1 0 ABC transporter C-terminal domain IFP_35_N PF07334.13 ORF40159 - 0.3 11.2 6.5 1.4 9.1 0.3 2.1 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus NuA4 PF09340.10 ORF40159 - 0.44 10.5 3.9 0.75 9.7 3.9 1.6 1 1 0 1 1 1 0 Histone acetyltransferase subunit NuA4 G-gamma PF00631.22 ORF40159 - 0.77 9.8 3.9 5.8 7.0 0.5 2.1 1 1 1 2 2 2 0 GGL domain LapA_dom PF06305.11 ORF40159 - 0.83 9.5 5.1 82 3.1 5.1 2.2 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DFP PF04127.15 ORF39923 - 0.00053 19.9 0.0 0.00069 19.5 0.0 1.1 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein IGPD PF00475.18 ORF39920 - 0.051 13.9 0.0 0.051 13.9 0.0 1.0 1 0 0 1 1 1 0 Imidazoleglycerol-phosphate dehydratase LigB PF02900.18 ORF39704 - 0.065 12.3 0.0 0.071 12.2 0.0 1.0 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase DHHC PF01529.20 ORF39677 - 9.5e-17 61.4 4.2 9.7e-17 61.3 4.2 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase GatB_N PF02934.15 ORF39545 - 0.013 15.0 0.3 0.014 14.9 0.3 1.0 1 0 0 1 1 1 0 GatB/GatE catalytic domain DUF3199 PF11436.8 ORF39249 - 0.055 13.5 0.1 0.055 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3199) Ilm1 PF10311.9 ORF39231 - 0.035 13.7 0.1 0.039 13.6 0.1 1.0 1 0 0 1 1 1 0 Increased loss of mitochondrial DNA protein 1 hNIFK_binding PF12196.8 ORF39155 - 0.071 12.6 0.1 0.13 11.8 0.1 1.5 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK MHCassoc_trimer PF08831.10 ORF3915 - 0.13 12.3 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 Class II MHC-associated invariant chain trimerisation domain PRIMA1 PF16101.5 ORF38967 - 9.7 6.3 10.4 11 6.1 10.4 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 HEPN_Cthe2314 PF18730.1 ORF38916 - 0.0037 17.3 0.3 0.0037 17.3 0.3 1.1 1 0 0 1 1 1 1 Cthe_2314-like HEPN Rotamase_2 PF13145.6 ORF38733 - 0.028 15.2 0.3 0.033 15.0 0.3 1.0 1 0 0 1 1 1 0 PPIC-type PPIASE domain NRDE-2 PF08424.10 ORF38733 - 0.099 11.7 2.0 0.1 11.7 2.0 1.0 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference Tagatose_6_P_K PF08013.11 ORF38523 - 0.32 9.6 0.7 0.32 9.6 0.7 1.0 1 0 0 1 1 1 0 Tagatose 6 phosphate kinase Na_Ca_ex PF01699.24 ORF38433 - 1.1e-05 25.5 0.0 1.1e-05 25.5 0.0 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein Myticin-prepro PF10690.9 ORF37778 - 0.08 13.2 7.2 0.097 12.9 7.2 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Acp26Ab PF05777.12 ORF37654 - 0.061 14.0 1.9 0.064 13.9 1.9 1.2 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) Ribosomal_S5 PF00333.20 ORF37451 - 0.044 13.8 0.0 0.059 13.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S5, N-terminal domain DHHC PF01529.20 ORF3745 - 5.1e-14 52.5 12.5 6.3e-14 52.2 12.5 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase UL42 PF17638.2 ORF37421 - 0.03 14.3 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 HCMV UL42 DUF5385 PF17359.2 ORF37266 - 0.021 14.4 0.1 0.022 14.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) HycI PF01750.18 ORF37081 - 0.044 13.6 0.9 0.052 13.4 0.3 1.4 1 1 1 2 2 2 0 Hydrogenase maturation protease DUF760 PF05542.11 ORF36888 - 0.06 13.7 0.4 0.075 13.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF760) Antimicrobial_7 PF08102.11 ORF36247 - 0.031 14.5 0.0 0.043 14.0 0.0 1.3 1 0 0 1 1 1 0 Scorpion antimicrobial peptide HEAT_EZ PF13513.6 ORF36247 - 0.19 12.3 0.0 0.26 11.8 0.0 1.3 1 0 0 1 1 1 0 HEAT-like repeat Receptor_2B4 PF11465.8 ORF3619 - 0.047 13.9 0.3 0.054 13.7 0.3 1.1 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 Cmc1 PF08583.10 ORF34737 - 0.12 12.4 0.0 0.16 12.0 0.0 1.4 1 1 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like STAT2_C PF12188.8 ORF34078 - 0.16 11.9 0.8 0.53 10.2 0.3 1.9 1 1 1 2 2 2 0 Signal transducer and activator of transcription 2 C terminal DUF2631 PF10939.8 ORF33918 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) Foamy_virus_ENV PF03408.14 ORF3389 - 0.29 8.9 2.7 0.29 8.9 2.7 1.0 1 0 0 1 1 1 0 Foamy virus envelope protein ELM2 PF01448.24 ORF33445 - 0.0064 17.2 0.6 0.017 15.8 0.0 1.9 2 0 0 2 2 2 1 ELM2 domain DUF4784 PF16023.5 ORF32893 - 0.091 11.7 1.5 0.087 11.8 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4784) YolD PF08863.10 ORF32726 - 0.04 14.0 0.0 0.046 13.8 0.0 1.1 1 0 0 1 1 1 0 YolD-like protein ENOD40 PF08247.11 ORF32012 - 3.3 7.9 7.2 2 8.6 0.2 2.9 3 0 0 3 3 3 0 ENOD40 protein DHR-2 PF06920.13 ORF3199 - 0.0039 15.9 0.0 0.004 15.9 0.0 1.0 1 0 0 1 1 1 1 Dock homology region 2 APO_RNA-bind PF05634.11 ORF3199 - 0.11 11.8 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 APO RNA-binding DUF3671 PF12420.8 ORF31719 - 0.019 15.1 0.4 0.019 15.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function Sigma_reg_N PF13800.6 ORF31719 - 0.027 14.8 0.3 0.039 14.3 0.3 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal T2SSF PF00482.23 ORF31719 - 0.064 13.2 0.1 0.074 13.0 0.1 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F Bee_toxin PF17454.2 ORF31719 - 2 8.5 6.3 3 8.0 6.3 1.3 1 0 0 1 1 1 0 Honey bee toxin ComC PF03047.14 ORF31668 - 0.0068 16.1 0.3 3.3 7.6 0.1 2.2 2 0 0 2 2 2 2 COMC family T3RM_EcoP15I_C PF18273.1 ORF31662 - 0.077 13.3 0.1 0.11 12.9 0.1 1.3 1 0 0 1 1 1 0 Type III R-M EcoP15I C-terminal domain zf-CpG_bind_C PF12269.8 ORF31580 - 0.69 9.7 7.0 0.7 9.6 7.0 1.0 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain ERbeta_N PF12497.8 ORF31502 - 0.18 11.6 3.7 0.21 11.4 3.7 1.1 1 0 0 1 1 1 0 Estrogen receptor beta AATase PF07247.12 ORF31477 - 0.0016 17.1 0.3 0.0016 17.1 0.3 1.0 1 0 0 1 1 1 1 Alcohol acetyltransferase WES_acyltransf PF03007.16 ORF31477 - 0.0056 16.5 0.0 0.0058 16.4 0.0 1.0 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Endotoxin_C2 PF18449.1 ORF31110 - 0.074 13.4 0.1 0.094 13.1 0.1 1.2 1 0 0 1 1 1 0 Delta endotoxin LANC_like PF05147.13 ORF31101 - 0.058 12.0 0.0 0.058 12.0 0.0 1.0 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein DUF883 PF05957.13 ORF31045 - 0.057 14.0 0.1 0.07 13.7 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) BRX PF08381.11 ORF30683 - 0.0021 17.4 0.0 0.0031 16.9 0.0 1.3 1 0 0 1 1 1 1 Transcription factor regulating root and shoot growth via Pin3 DUF1848 PF08902.11 ORF30642 - 0.16 11.7 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1848) CRISPR_Cas9_WED PF18061.1 ORF29774 - 0.011 15.8 0.3 0.012 15.7 0.3 1.1 1 0 0 1 1 1 0 CRISPR-Cas9 WED domain DUF4972 PF16342.5 ORF29774 - 0.046 13.4 0.4 0.047 13.4 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) QWRF PF04484.12 ORF29586 - 0.091 12.5 1.1 0.092 12.5 1.1 1.0 1 0 0 1 1 1 0 QWRF family NEMP PF10225.9 ORF29223 - 0.0056 16.4 0.9 0.0057 16.3 0.9 1.0 1 0 0 1 1 1 1 NEMP family DUF3316 PF11777.8 ORF29223 - 0.0061 16.6 0.8 0.0064 16.6 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3316) AC_N PF16214.5 ORF29034 - 3.6 6.6 4.0 3.9 6.5 4.0 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Ge1_WD40 PF16529.5 ORF27843 - 0.0026 16.8 0.1 0.0026 16.8 0.1 1.0 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40 PF00400.32 ORF27843 - 0.0026 18.5 0.0 0.0065 17.3 0.0 1.6 2 0 0 2 2 2 1 WD domain, G-beta repeat NB PF04159.13 ORF27638 - 0.061 13.4 0.0 0.073 13.1 0.0 1.1 1 0 0 1 1 1 0 NB glycoprotein Peptidase_C48 PF02902.19 ORF27057 - 3.1e-05 23.9 0.0 3.2e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain CAF1 PF04857.20 ORF25750 - 0.1 11.8 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 CAF1 family ribonuclease DUF4478 PF14793.6 ORF25546 - 0.12 12.2 0.1 0.19 11.7 0.1 1.3 1 1 0 1 1 1 0 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CDC37_C PF08564.10 ORF25543 - 0.092 12.9 0.2 0.1 12.8 0.2 1.1 1 0 0 1 1 1 0 Cdc37 C terminal domain Isochorismatase PF00857.20 ORF25389 - 1.4e-12 48.1 0.3 1.6e-12 48.0 0.3 1.0 1 0 0 1 1 1 1 Isochorismatase family PhdYeFM_antitox PF02604.19 ORF25065 - 0.17 11.7 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system DUF1987 PF09345.10 ORF25039 - 0.015 15.0 0.4 0.019 14.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) Codanin-1_C PF15296.6 ORF25016 - 0.0024 17.9 0.6 0.0027 17.8 0.6 1.1 1 0 0 1 1 1 1 Codanin-1 C-terminus V-set_CD47 PF08204.11 ORF24999 - 0.0078 16.2 2.9 0.0082 16.1 2.9 1.1 1 0 0 1 1 1 1 CD47 immunoglobulin-like domain DUF3810 PF12725.7 ORF24671 - 0.89 8.8 3.0 0.88 8.9 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Baculo_11_kDa PF06143.11 ORF24671 - 2.3 7.8 8.7 1.2 8.7 6.3 1.7 1 1 1 2 2 2 0 Baculovirus 11 kDa family Trypan_PARP PF05887.11 ORF24094 - 0.048 13.6 0.1 0.057 13.4 0.1 1.0 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Antimicrobial13 PF08108.11 ORF23678 - 0.11 12.6 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 Halocidin family LPP PF04728.13 ORF23113 - 0.009 16.4 0.5 0.54 10.7 0.4 2.1 1 1 1 2 2 2 1 Lipoprotein leucine-zipper KASH_CCD PF14662.6 ORF23113 - 0.0096 15.8 3.0 0.012 15.5 3.0 1.1 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH BRE1 PF08647.11 ORF23113 - 0.036 14.1 5.3 0.063 13.4 5.3 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase SecA_DEAD PF07517.14 ORF23113 - 0.043 13.1 1.9 0.05 12.9 1.9 1.0 1 0 0 1 1 1 0 SecA DEAD-like domain HlyD_2 PF12700.7 ORF23113 - 0.082 11.6 5.4 0.087 11.5 5.4 1.0 1 0 0 1 1 1 0 HlyD family secretion protein ABC_tran_CTD PF16326.5 ORF23113 - 0.099 12.9 2.5 0.27 11.5 2.5 1.7 1 1 0 1 1 1 0 ABC transporter C-terminal domain IFP_35_N PF07334.13 ORF23113 - 0.3 11.2 6.5 1.4 9.1 0.3 2.1 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus NuA4 PF09340.10 ORF23113 - 0.44 10.5 3.9 0.75 9.7 3.9 1.6 1 1 0 1 1 1 0 Histone acetyltransferase subunit NuA4 G-gamma PF00631.22 ORF23113 - 0.77 9.8 3.9 5.8 7.0 0.5 2.1 1 1 1 2 2 2 0 GGL domain LapA_dom PF06305.11 ORF23113 - 0.83 9.5 5.1 82 3.1 5.1 2.2 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain vATP-synt_AC39 PF01992.16 ORF22962 - 0.087 12.3 0.0 0.087 12.3 0.0 1.0 1 0 0 1 1 1 0 ATP synthase (C/AC39) subunit MtrB PF05440.12 ORF22946 - 0.15 12.5 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B CMD PF02627.20 ORF22937 - 0.13 12.3 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Carboxymuconolactone decarboxylase family PhdYeFM_antitox PF02604.19 ORF2292 - 0.17 11.7 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Trypan_PARP PF05887.11 ORF2275 - 0.39 10.7 4.7 0.45 10.5 4.7 1.0 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Tim29 PF10171.9 ORF22366 - 0.063 12.8 0.0 0.066 12.7 0.0 1.0 1 0 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 DUF3955 PF13127.6 ORF21666 - 0.083 12.7 4.0 0.11 12.4 4.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3955) Sel_put PF04328.13 ORF21415 - 1.6e-30 104.9 0.5 1.7e-30 104.8 0.5 1.0 1 0 0 1 1 1 1 Selenoprotein, putative Oxidored_molyb PF00174.19 ORF21176 - 0.071 12.7 0.0 0.076 12.6 0.0 1.0 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain Colicin_K PF17500.2 ORF20914 - 0.11 13.1 0.4 0.59 10.7 0.4 1.9 1 1 0 1 1 1 0 Colicin-K Trypan_PARP PF05887.11 ORF20461 - 0.39 10.7 4.7 0.45 10.5 4.7 1.0 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Ribosomal_S30 PF04758.14 ORF20166 - 3.6e-26 91.1 7.7 4.1e-26 91.0 7.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S30 Snurportin1 PF11538.8 ORF20166 - 1.8 8.8 10.3 0.51 10.6 5.6 2.0 1 1 1 2 2 2 0 Snurportin1 DUF1351 PF07083.11 ORF19687 - 0.0066 16.2 1.3 0.0072 16.1 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1351) STAT_int PF02865.17 ORF19687 - 0.018 15.5 0.4 0.022 15.2 0.4 1.1 1 0 0 1 1 1 0 STAT protein, protein interaction domain HRDC PF00570.23 ORF19687 - 0.11 12.5 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 HRDC domain SseC PF04888.12 ORF19687 - 0.7 9.4 1.6 0.72 9.4 1.6 1.0 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family DUF2631 PF10939.8 ORF19664 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) Transposase_1 PF01359.18 ORF19240 - 0.1 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Transposase (partial DDE domain) DOCK_N PF16172.5 ORF19111 - 0.26 10.2 4.0 0.28 10.0 4.0 1.0 1 0 0 1 1 1 0 DOCK N-terminus DUF5472 PF17566.2 ORF18904 - 1.1 9.3 3.8 0.81 9.7 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5472) DUF35_N PF12172.8 ORF18892 - 0.24 11.3 0.4 0.24 11.3 0.4 2.9 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) PPP1R35_C PF15503.6 ORF18884 - 0.034 13.9 0.4 0.043 13.6 0.4 1.0 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 35 C-terminus gp32 PF08804.10 ORF17972 - 0.13 12.3 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 gp32 DNA binding protein like TMEM174 PF15029.6 ORF1722 - 0.018 14.8 0.9 0.02 14.6 0.9 1.1 1 0 0 1 1 1 0 Transmembrane protein 174 Prenyltrans PF00432.21 ORF17013 - 0.084 12.6 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat bacHORMA_2 PF18173.1 ORF16968 - 0.044 13.6 0.0 0.063 13.1 0.0 1.3 1 1 0 1 1 1 0 Bacterial HORMA domain 2 MerE PF05052.12 ORF16949 - 0.032 14.1 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 MerE protein DUF2630 PF10944.8 ORF16949 - 0.2 12.1 0.4 0.25 11.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) LRS4 PF10422.9 ORF16651 - 0.12 11.9 0.4 0.12 11.9 0.4 1.0 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 DUF4481 PF14800.6 ORF16240 - 0.37 10.2 5.1 0.4 10.1 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) PhdYeFM_antitox PF02604.19 ORF16201 - 0.17 11.7 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Antibiotic_NAT PF02522.14 ORF15912 - 0.0017 18.2 0.2 0.0018 18.1 0.2 1.0 1 0 0 1 1 1 1 Aminoglycoside 3-N-acetyltransferase HipA_C PF07804.12 ORF15629 - 0.11 12.2 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 HipA-like C-terminal domain Couple_hipA PF13657.6 ORF15590 - 0.06 14.0 0.1 0.06 14.0 0.1 1.1 1 0 0 1 1 1 0 HipA N-terminal domain NS3_envE PF02723.14 ORF15470 - 0.033 14.3 4.5 0.036 14.1 4.5 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Pex24p PF06398.11 ORF15470 - 0.44 9.5 2.9 0.41 9.6 2.9 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Tim29 PF10171.9 ORF15121 - 0.063 12.8 0.0 0.066 12.7 0.0 1.0 1 0 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 IGF2_C PF08365.11 ORF15002 - 0.03 14.3 0.1 0.043 13.8 0.0 1.4 1 1 0 1 1 1 0 Insulin-like growth factor II E-peptide MORN PF02493.20 ORF14587 - 4.2e-15 54.6 25.3 2.1e-08 33.6 1.9 3.9 4 0 0 4 4 4 3 MORN repeat Chromadorea_ALT PF05535.12 ORF14411 - 0.054 13.7 1.1 0.093 12.9 0.4 1.7 1 1 1 2 2 2 0 Chromadorea ALT protein GAT PF03127.14 ORF14411 - 0.11 12.9 0.1 0.19 12.1 0.1 1.4 1 1 0 1 1 1 0 GAT domain DUF5472 PF17566.2 ORF13899 - 1.1 9.3 3.8 0.81 9.7 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5472) VEGFR-2_TMD PF17988.1 ORF13666 - 0.043 13.3 2.3 0.068 12.6 2.3 1.3 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain PAG PF15347.6 ORF13666 - 0.32 10.0 0.9 0.31 10.0 0.9 1.0 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched Dermcidin PF15291.6 ORF13259 - 0.19 12.3 0.0 0.19 12.3 0.0 1.1 1 0 0 1 1 1 0 Dermcidin, antibiotic peptide Met_synt_B12 PF02965.17 ORF12708 - 1.5e-21 77.1 0.0 1.7e-21 76.9 0.0 1.0 1 0 0 1 1 1 1 Vitamin B12 dependent methionine synthase, activation domain Pkinase PF00069.25 ORF12513 - 2.6e-10 40.1 0.2 2.7e-10 40.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 ORF12513 - 0.00048 19.8 0.0 0.00048 19.8 0.0 1.0 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_Tyr PF07714.17 ORF12513 - 0.0022 17.3 0.2 0.0023 17.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Mak16 PF04874.14 ORF12513 - 0.0084 16.7 0.1 0.01 16.4 0.1 1.1 1 0 0 1 1 1 1 Mak16 protein C-terminal region DUF2631 PF10939.8 ORF12348 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) Acyl-CoA_dh_M PF02770.19 ORF12032 - 0.061 13.5 0.0 0.087 13.0 0.0 1.3 1 1 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain DUF61 PF01886.16 ORF12014 - 0.047 13.7 0.0 0.054 13.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF61 FrhB_FdhB_C PF04432.13 ORF12014 - 0.12 12.2 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus L_biotic_typeA PF04604.13 ORF11822 - 0.094 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Type-A lantibiotic PsaM PF07465.13 ORF11693 - 0.039 13.7 0.0 0.057 13.2 0.0 1.3 1 0 0 1 1 1 0 Photosystem I protein M (PsaM) FBA PF04300.13 ORF11388 - 0.11 12.1 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 F-box associated region Arm_3 PF16186.5 ORF11277 - 0.058 13.0 0.0 0.079 12.5 0.0 1.2 1 0 0 1 1 1 0 Atypical Arm repeat DUF4716 PF15837.5 ORF112549 - 0.29 11.2 4.0 0.45 10.6 4.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4716) SM-ATX PF14438.6 ORF112297 - 0.013 15.6 0.3 0.021 14.9 0.1 1.5 1 1 1 2 2 2 0 Ataxin 2 SM domain PhdYeFM_antitox PF02604.19 ORF111921 - 0.17 11.7 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system MerE PF05052.12 ORF111851 - 0.032 14.1 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 MerE protein DUF2630 PF10944.8 ORF111851 - 0.2 12.1 0.4 0.25 11.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) VATC PF18716.1 ORF111121 - 0.2 11.5 0.4 0.2 11.5 0.4 2.0 2 0 0 2 2 2 0 Vms1-associating treble clef domain Antimicrobial13 PF08108.11 ORF111017 - 0.11 12.6 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 Halocidin family PRIMA1 PF16101.5 ORF110835 - 5.8 7.0 10.0 6 6.9 10.0 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Kinesin PF00225.23 ORF110310 - 0.042 12.8 0.1 0.052 12.5 0.1 1.1 1 0 0 1 1 1 0 Kinesin motor domain R2K_3 PF14243.6 ORF110293 - 0.091 12.8 0.0 0.096 12.7 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 Peptidase_C12 PF01088.21 ORF110006 - 1.7e-10 41.1 0.1 1.8e-10 40.9 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 Cyclin_N PF00134.23 ORF109927 - 0.072 12.8 0.1 0.08 12.7 0.1 1.1 1 0 0 1 1 1 0 Cyclin, N-terminal domain Mito_carr PF00153.27 ORF109355 - 3e-10 39.9 0.0 3.3e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF4501 PF14946.6 ORF109342 - 0.045 13.8 2.1 0.05 13.7 2.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Tryp_alpha_amyl PF00234.22 ORF109342 - 0.05 14.0 3.6 0.053 13.9 3.6 1.1 1 0 0 1 1 1 0 Protease inhibitor/seed storage/LTP family SBF PF01758.16 ORF109145 - 0.028 14.1 0.3 0.034 13.8 0.3 1.0 1 0 0 1 1 1 0 Sodium Bile acid symporter family Clc-like PF07062.12 ORF109008 - 0.35 10.3 4.6 0.41 10.1 4.6 1.1 1 0 0 1 1 1 0 Clc-like Peptidase_U4 PF03419.13 ORF109008 - 0.38 10.0 8.7 0.41 9.9 8.7 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA DUF35_N PF12172.8 ORF108992 - 0.24 11.3 0.4 0.24 11.3 0.4 2.9 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TMEM144 PF07857.12 ORF10885 - 1.7e-08 33.8 0.6 1.9e-08 33.7 0.6 1.0 1 0 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Sugar_transport PF06800.12 ORF10885 - 0.00064 19.1 0.4 0.0007 19.0 0.4 1.0 1 0 0 1 1 1 1 Sugar transport protein Oxidored_molyb PF00174.19 ORF108689 - 0.071 12.7 0.0 0.076 12.6 0.0 1.0 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain DUF1660 PF07874.11 ORF108570 - 0.07 13.6 0.7 0.083 13.4 0.7 1.2 1 0 0 1 1 1 0 Prophage protein (DUF1660) Gp45_2 PF17470.2 ORF108146 - 0.016 15.2 0.1 0.024 14.6 0.1 1.3 1 0 0 1 1 1 0 Phage gene product 45.2 Vps4_C PF09336.10 ORF107722 - 0.00011 22.1 1.6 0.00036 20.5 0.3 2.3 1 1 2 3 3 3 1 Vps4 C terminal oligomerisation domain AAA_lid_3 PF17862.1 ORF107722 - 0.0039 17.0 0.1 0.019 14.8 0.1 1.9 1 1 0 1 1 1 1 AAA+ lid domain DIRP PF06584.13 ORF107722 - 0.015 15.4 0.1 0.02 15.1 0.1 1.1 1 0 0 1 1 1 0 DIRP Phage_term_sma PF07141.11 ORF107408 - 0.12 12.1 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative bacteriophage terminase small subunit PhdYeFM_antitox PF02604.19 ORF107 - 0.17 11.7 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system TMEM213 PF15192.6 ORF106974 - 0.049 13.6 2.1 0.058 13.4 2.1 1.1 1 0 0 1 1 1 0 TMEM213 family Sarcolipin PF05366.11 ORF106443 - 0.099 12.4 0.1 0.19 11.4 0.1 1.6 1 0 0 1 1 1 0 Sarcolipin GPR_Gpa2_C PF11970.8 ORF106207 - 0.07 13.2 0.3 0.085 12.9 0.3 1.2 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term YacG PF03884.14 ORF106173 - 5.5e-25 86.9 2.1 6.4e-25 86.6 2.1 1.2 1 0 0 1 1 1 1 DNA gyrase inhibitor YacG DUF2256 PF10013.9 ORF106173 - 0.1 12.7 1.9 5.7 7.2 0.1 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) RCDG1 PF15725.5 ORF10540 - 0.35 11.3 6.6 0.42 11.1 6.6 1.1 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein START PF01852.19 ORF105361 - 0.067 12.6 0.3 0.075 12.4 0.3 1.1 1 0 0 1 1 1 0 START domain DUF2065 PF09838.9 ORF104945 - 2e-21 75.8 3.3 2.2e-21 75.6 3.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2065) DUF4345 PF14248.6 ORF104945 - 0.004 17.0 0.6 0.0047 16.8 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4345) Cir_N PF10197.9 ORF104674 - 0.081 13.1 0.2 0.53 10.5 0.0 1.9 2 0 0 2 2 2 0 N-terminal domain of CBF1 interacting co-repressor CIR Pkinase PF00069.25 ORF104489 - 2.5e-05 23.8 0.0 3.2e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF688 PF05097.12 ORF104147 - 2.9 7.0 6.6 0.84 8.7 1.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF688) DUF2518 PF10726.9 ORF104127 - 0.18 11.4 0.2 0.19 11.4 0.2 1.1 1 0 0 1 1 1 0 Protein of function (DUF2518) Sacchrp_dh_C PF16653.5 ORF103405 - 2e-07 31.4 0.0 2.3e-07 31.2 0.0 1.0 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain AATase PF07247.12 ORF102587 - 0.0016 17.1 0.3 0.0016 17.1 0.3 1.0 1 0 0 1 1 1 1 Alcohol acetyltransferase WES_acyltransf PF03007.16 ORF102587 - 0.0056 16.5 0.0 0.0058 16.4 0.0 1.0 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain zf-C2H2 PF00096.26 ORF102261 - 1.6e-13 50.3 13.6 2e-07 31.1 2.8 2.4 2 1 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF102261 - 1.6e-11 44.1 18.1 9.5e-07 29.0 1.1 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF102261 - 4.4e-09 36.4 12.4 0.00029 21.4 1.7 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF102261 - 1.5e-08 34.5 16.2 0.00016 21.6 4.3 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF102261 - 3.9e-05 23.3 4.3 0.063 13.1 1.3 2.2 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-met PF12874.7 ORF102261 - 0.0001 22.5 8.9 0.057 13.8 2.4 2.6 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_3rep PF18868.1 ORF102261 - 0.0052 17.4 3.7 0.0058 17.3 3.7 1.1 1 0 0 1 1 1 1 Zinc finger C2H2-type, 3 repeats zf-H2C2_5 PF13909.6 ORF102261 - 0.0062 16.3 4.1 0.0062 16.3 4.1 2.7 3 0 0 3 3 3 2 C2H2-type zinc-finger domain zf-Di19 PF05605.12 ORF102261 - 0.01 16.1 5.0 0.014 15.6 5.0 1.3 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-HIT PF04438.16 ORF102261 - 0.031 14.1 4.8 0.6 10.0 0.4 2.2 2 0 0 2 2 2 0 HIT zinc finger zinc_ribbon_15 PF17032.5 ORF102261 - 0.034 14.9 3.7 0.04 14.7 3.7 1.1 1 0 0 1 1 1 0 zinc-ribbon family zf-C2H2_2 PF12756.7 ORF102261 - 0.036 14.4 11.6 0.3 11.4 4.2 2.1 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) LIM PF00412.22 ORF102261 - 0.04 14.2 4.7 1.1 9.5 0.5 2.1 2 0 0 2 2 2 0 LIM domain zf-MYST PF17772.1 ORF102261 - 0.071 12.7 5.9 0.26 10.9 1.3 2.1 2 0 0 2 2 2 0 MYST family zinc finger domain zf-C2HC_2 PF13913.6 ORF102261 - 0.11 12.4 5.9 3.3 7.7 1.9 2.6 2 1 0 2 2 2 0 zinc-finger of a C2HC-type C1_1 PF00130.22 ORF102261 - 0.15 12.0 7.5 1.6 8.6 0.3 2.2 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) FYVE PF01363.21 ORF102261 - 0.2 11.8 6.3 1.1 9.4 6.3 1.9 1 1 0 1 1 1 0 FYVE zinc finger zf_UBZ PF18439.1 ORF102261 - 0.23 11.1 4.1 0.31 10.7 0.4 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 ORF102261 - 0.46 10.6 5.3 4.5 7.5 5.3 2.1 1 1 1 2 2 2 0 Zinc ribbon domain zf-C2H2_jaz PF12171.8 ORF102261 - 1.4 9.3 13.4 2.6 8.4 2.3 2.6 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding DUF35_N PF12172.8 ORF102075 - 0.24 11.3 0.4 0.24 11.3 0.4 2.9 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Carot_N PF09150.10 ORF101643 - 0.13 12.2 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Orange carotenoid protein, N-terminal DUF5423 PF17461.2 ORF101469 - 0.18 10.6 1.6 0.19 10.5 1.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Rpr2 PF04032.16 ORF101343 - 0.021 15.1 0.2 0.022 15.0 0.2 1.2 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Transketolase_N PF00456.21 ORF101343 - 0.1 11.5 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Transketolase, thiamine diphosphate binding domain Ribonuclease_T2 PF00445.18 ORF101213 - 0.072 13.3 0.0 0.072 13.3 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease T2 family Ank_4 PF13637.6 ORF101023 - 0.045 14.3 0.1 0.073 13.7 0.1 1.5 1 1 0 1 1 1 0 Ankyrin repeats (many copies) Planc_extracel PF07595.12 ORF100981 - 0.1 12.4 3.0 1.3 9.0 2.3 2.2 2 0 0 2 2 2 0 Planctomycete extracellular DUF2631 PF10939.8 ORF100238 - 0.044 13.6 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) Rabaptin PF03528.15 ORF100012 - 0.04 12.6 0.0 0.046 12.4 0.0 1.0 1 0 0 1 1 1 0 Rabaptin DUF3740 PF12548.8 NODE_83971_length_190_cov_0.916129_g76030_i0forward_frame_1 - 0.1 13.0 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Sulfatase protein DASH_Dam1 PF08653.10 NODE_83934_length_190_cov_1.025806_g75993_i0forward_frame_1 - 0.021 14.6 0.1 0.03 14.1 0.1 1.3 1 0 0 1 1 1 0 DASH complex subunit Dam1 DUF5083 PF16890.5 NODE_83929_length_190_cov_1.025806_g75988_i0reverse_frame_1 - 0.011 15.5 2.1 0.011 15.5 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5083) DUF5527 PF17665.1 NODE_83924_length_190_cov_1.032258_g75983_i0forward_frame_1 - 0.24 10.9 1.6 0.25 10.9 1.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5527) CxC3 PF18804.1 NODE_83915_length_190_cov_1.032258_g75974_i0forward_frame_1 - 0.21 11.4 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases DUF4611 PF15387.6 NODE_83910_length_190_cov_1.032258_g75969_i0forward_frame_1 - 3.1 8.1 6.5 3.9 7.7 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) PAM2 PF07145.15 NODE_83894_length_190_cov_1.032258_g75953_i0reverse_frame_1 - 0.071 12.8 0.1 0.15 11.8 0.1 1.6 1 0 0 1 1 1 0 Ataxin-2 C-terminal region Phage_attach PF05354.11 NODE_83893_length_190_cov_1.032258_g75952_i0forward_frame_1 - 0.059 13.3 0.0 0.059 13.3 0.0 1.1 1 0 0 1 1 1 0 Phage Head-Tail Attachment MarR_2 PF12802.7 NODE_83885_length_190_cov_1.032258_g75944_i0forward_frame_1 - 0.023 14.6 0.0 0.028 14.3 0.0 1.2 1 0 0 1 1 1 0 MarR family MRP-L20 PF12824.7 NODE_83885_length_190_cov_1.032258_g75944_i0forward_frame_1 - 0.027 14.7 0.0 0.027 14.7 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 SPA PF08616.10 NODE_83869_length_190_cov_1.032258_g75928_i0forward_frame_1 - 0.14 12.1 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Stabilization of polarity axis Rad21_Rec8 PF04824.16 NODE_83863_length_190_cov_1.064516_g75922_i0reverse_frame_1 - 0.14 11.5 0.1 0.16 11.3 0.1 1.1 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein DUF5048 PF16467.5 NODE_83858_length_190_cov_1.083871_g75917_i0forward_frame_1 - 0.098 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5048) SAM_LFY PF01698.16 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_1 - 0.13 12.3 0.1 0.17 11.9 0.1 1.4 1 1 0 1 1 1 0 Floricaula / Leafy protein SAM domain CSS-motif PF12792.7 NODE_83836_length_190_cov_1.148387_g75895_i0forward_frame_1 - 0.13 11.7 0.1 0.14 11.6 0.1 1.0 1 0 0 1 1 1 0 CSS motif domain associated with EAL NOB1_Zn_bind PF08772.11 NODE_83831_length_190_cov_1.167742_g75890_i0forward_frame_1 - 0.0027 17.8 0.2 0.0039 17.3 0.2 1.2 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like DUF5540 PF17694.1 NODE_83822_length_190_cov_1.206452_g75881_i0reverse_frame_1 - 0.037 14.5 0.0 0.045 14.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5540) Ribosomal_S15 PF00312.22 NODE_83815_length_190_cov_1.225806_g75874_i0reverse_frame_1 - 0.053 13.7 0.5 0.068 13.4 0.5 1.0 1 0 0 1 1 1 0 Ribosomal protein S15 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks386.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks386.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks386.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks386.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:22:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Binary_toxB PF03495.14 NODE_83807_length_190_cov_1.270968_g75866_i0forward_frame_1 - 0.024 14.8 0.1 0.039 14.2 0.0 1.4 1 1 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain DUF3755 PF12579.8 NODE_83800_length_190_cov_1.277419_g75859_i0reverse_frame_1 - 0.0052 16.4 0.4 0.0096 15.5 0.4 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF3755) Lig_chan PF00060.26 NODE_83796_length_190_cov_1.283871_g75855_i0reverse_frame_1 - 0.056 13.3 0.1 0.057 13.3 0.1 1.1 1 0 0 1 1 1 0 Ligand-gated ion channel SelR PF01641.18 NODE_83784_length_190_cov_1.290323_g75843_i0reverse_frame_1 - 0.028 14.5 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 SelR domain IQ PF00612.27 NODE_83770_length_190_cov_1.348387_g75829_i0forward_frame_1 - 0.13 12.1 4.4 0.16 11.9 0.9 2.3 2 0 0 2 2 2 0 IQ calmodulin-binding motif RelB PF04221.12 NODE_83759_length_190_cov_1.412903_g75818_i0forward_frame_1 - 0.049 13.6 0.0 0.058 13.4 0.0 1.2 1 0 0 1 1 1 0 RelB antitoxin FAST_1 PF06743.15 NODE_83755_length_190_cov_1.419355_g75814_i0forward_frame_1 - 0.046 13.7 0.2 0.076 13.0 0.2 1.3 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 1 Mg_chelatase_C PF13335.6 NODE_83748_length_190_cov_1.451613_g75807_i0reverse_frame_1 - 0.052 14.2 0.0 0.054 14.1 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI C-terminal SLC35F PF06027.12 NODE_83744_length_190_cov_1.464516_g75803_i0forward_frame_1 - 1.5 8.2 7.5 1.6 8.1 7.5 1.2 1 0 0 1 1 1 0 Solute carrier family 35 Albumin_I_a PF16720.5 NODE_83743_length_190_cov_1.470968_g75802_i0reverse_frame_1 - 0.062 13.2 0.0 0.095 12.6 0.0 1.3 1 0 0 1 1 1 0 Albumin I chain a DUF5528 PF17666.1 NODE_83740_length_190_cov_1.470968_g75799_i0forward_frame_1 - 0.17 11.8 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5528) PARP PF00644.20 NODE_83728_length_190_cov_1.522581_g75787_i0reverse_frame_1 - 0.0023 17.5 0.0 0.0025 17.4 0.0 1.1 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DUF3710 PF12502.8 NODE_83727_length_190_cov_1.529032_g75786_i0forward_frame_1 - 0.084 12.5 0.0 0.084 12.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3710) XisI PF08869.11 NODE_83717_length_190_cov_1.541935_g75776_i0forward_frame_1 - 0.028 14.8 0.1 0.029 14.7 0.1 1.0 1 0 0 1 1 1 0 XisI protein Clathrin_lg_ch PF01086.17 NODE_83717_length_190_cov_1.541935_g75776_i0forward_frame_1 - 0.034 14.2 1.0 0.037 14.1 1.0 1.0 1 0 0 1 1 1 0 Clathrin light chain HSCB_C PF07743.13 NODE_83717_length_190_cov_1.541935_g75776_i0forward_frame_1 - 0.081 13.4 2.8 0.098 13.2 2.8 1.2 1 0 0 1 1 1 0 HSCB C-terminal oligomerisation domain TRAM1 PF08390.11 NODE_83714_length_190_cov_1.541935_g75773_i0reverse_frame_1 - 0.059 13.0 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 TRAM1-like protein Chlam_OMP3 PF03503.13 NODE_83698_length_190_cov_1.548387_g75757_i0forward_frame_1 - 0.032 14.5 0.4 0.043 14.1 0.4 1.1 1 0 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 3 DUF3390 PF11870.8 NODE_83689_length_190_cov_1.548387_g75748_i0forward_frame_1 - 0.024 15.0 0.0 0.031 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) DUF4645 PF15488.6 NODE_83687_length_190_cov_1.548387_g75746_i0forward_frame_1 - 0.12 11.8 0.1 0.13 11.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4645) Flavi_NS4B PF01349.17 NODE_83679_length_190_cov_1.612903_g75738_i0forward_frame_1 - 0.0058 16.0 0.1 0.0061 16.0 0.1 1.0 1 0 0 1 1 1 1 Flavivirus non-structural protein NS4B CDC4_D PF16856.5 NODE_83675_length_190_cov_1.625806_g75734_i0forward_frame_1 - 0.076 12.9 0.3 0.82 9.6 0.1 2.1 2 0 0 2 2 2 0 Cell division control protein 4 dimerisation domain IBN_N PF03810.19 NODE_83666_length_190_cov_1.683871_g75725_i0forward_frame_1 - 0.042 13.8 0.0 0.064 13.2 0.0 1.3 1 0 0 1 1 1 0 Importin-beta N-terminal domain MYCBPAP PF14646.6 NODE_83651_length_190_cov_1.793548_g75710_i0reverse_frame_1 - 3e-08 33.0 0.1 3.2e-08 33.0 0.1 1.0 1 0 0 1 1 1 1 MYCBP-associated protein family CdiI_2 PF18593.1 NODE_83648_length_190_cov_1.806452_g75707_i0forward_frame_1 - 0.11 13.1 0.0 0.15 12.7 0.0 1.3 1 1 0 1 1 1 0 CdiI immunity protein Rubella_Capsid PF05750.11 NODE_83645_length_190_cov_1.838710_g75704_i0forward_frame_1 - 0.013 15.1 0.9 0.015 14.9 0.9 1.0 1 0 0 1 1 1 0 Rubella capsid protein Cpn60_TCP1 PF00118.24 NODE_83644_length_190_cov_1.845161_g75703_i0forward_frame_1 - 7.9e-06 24.8 0.1 8.2e-06 24.7 0.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family NADH-G_4Fe-4S_3 PF10588.9 NODE_83639_length_190_cov_1.890323_g75698_i0forward_frame_1 - 0.031 13.8 0.1 0.051 13.1 0.1 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region zf-LITAF-like PF10601.9 NODE_83638_length_190_cov_1.896774_g75697_i0forward_frame_1 - 1.5e-09 38.0 15.0 1.6e-09 37.9 15.0 1.0 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain HEV_ORF1 PF02444.16 NODE_83633_length_190_cov_1.916129_g75692_i0reverse_frame_1 - 0.054 14.1 1.9 0.057 14.0 1.9 1.2 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) YwcE PF17368.2 NODE_83632_length_190_cov_1.922581_g75691_i0forward_frame_1 - 0.0064 17.1 6.1 0.0073 16.9 6.1 1.0 1 0 0 1 1 1 1 Spore morphogenesis and germination YwcE TMCO5 PF14992.6 NODE_83632_length_190_cov_1.922581_g75691_i0forward_frame_1 - 2.3 7.7 4.9 2.2 7.8 4.9 1.1 1 0 0 1 1 1 0 TMCO5 family Herpes_env PF01673.18 NODE_83627_length_190_cov_1.954839_g75686_i0forward_frame_1 - 0.11 11.4 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus putative major envelope glycoprotein Fer4_7 PF12838.7 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 7.7e-05 23.2 1.9 9.6e-05 22.9 1.9 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.011 16.2 1.6 0.011 16.1 1.6 1.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.013 15.7 4.8 0.014 15.5 4.8 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.023 15.3 0.9 0.025 15.1 0.9 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_6 PF12837.7 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.084 13.0 3.4 0.084 13.0 3.4 1.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_10 PF13237.6 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.38 10.9 5.7 0.52 10.5 5.7 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.46 10.7 8.1 0.29 11.3 6.0 1.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.63 10.7 7.8 0.14 12.7 4.5 1.8 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 7.6 6.5 11.9 1.4 8.9 8.1 1.8 2 0 0 2 2 2 0 4Fe-4S binding domain DUF4139 PF13598.6 NODE_83623_length_190_cov_1.974194_g75682_i0reverse_frame_1 - 0.079 12.7 0.0 0.082 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) Glyco_hydro_36C PF16874.5 NODE_83618_length_190_cov_2.019355_g75677_i0reverse_frame_1 - 0.11 13.1 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 36 C-terminal domain DUF929 PF06053.11 NODE_83614_length_190_cov_2.045161_g75673_i0forward_frame_1 - 3 7.1 5.8 3 7.1 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) Nod1 PF17114.5 NODE_83612_length_190_cov_2.051613_g75671_i0forward_frame_1 - 0.014 15.6 0.1 0.017 15.3 0.1 1.3 1 1 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 DUF2783 PF10932.8 NODE_83599_length_190_cov_2.141935_g75658_i0forward_frame_1 - 0.1 12.3 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2783) HTH_7 PF02796.15 NODE_83596_length_190_cov_2.154839_g75655_i0reverse_frame_1 - 0.11 12.6 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF2417 PF10329.9 NODE_83589_length_190_cov_2.270968_g75648_i0forward_frame_1 - 0.19 11.1 5.3 0.21 11.0 5.3 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) HTH_OrfB_IS605 PF12323.8 NODE_83587_length_190_cov_2.303226_g75646_i0forward_frame_1 - 0.13 11.8 0.6 0.22 11.1 0.6 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Anoctamin PF04547.12 NODE_83586_length_190_cov_2.309677_g75645_i0forward_frame_1 - 0.013 14.3 0.0 0.014 14.2 0.0 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel DUF3954 PF13128.6 NODE_83579_length_190_cov_2.361290_g75638_i0forward_frame_1 - 0.011 15.6 0.4 0.016 15.0 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3954) ANAPC4 PF12896.7 NODE_83570_length_190_cov_2.483871_g75629_i0reverse_frame_1 - 1.3e-06 28.1 0.2 1.4e-06 27.9 0.2 1.0 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 4 TRPM_tetra PF16519.5 NODE_83570_length_190_cov_2.483871_g75629_i0reverse_frame_1 - 0.011 15.9 1.5 0.018 15.1 1.5 1.3 1 1 0 1 1 1 0 Tetramerisation domain of TRPM Fibrillin_U_N PF18193.1 NODE_83564_length_190_cov_2.541935_g75623_i0reverse_frame_1 - 1 9.5 5.1 0.33 11.1 1.7 2.1 2 1 0 2 2 2 0 Fibrillin 1 unique N-terminal domain IcmF-related PF06761.12 NODE_83545_length_190_cov_2.916129_g75604_i0reverse_frame_1 - 0.048 13.1 0.1 0.051 13.0 0.1 1.0 1 0 0 1 1 1 0 Intracellular multiplication and human macrophage-killing ADAM_CR PF08516.12 NODE_83545_length_190_cov_2.916129_g75604_i0forward_frame_1 - 0.12 12.8 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich DUF2384 PF09722.10 NODE_83542_length_190_cov_3.103226_g75601_i0forward_frame_1 - 0.075 13.1 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2384) LysE PF01810.18 NODE_83540_length_190_cov_3.141935_g75599_i0forward_frame_1 - 1.1e-15 57.7 3.0 1.3e-15 57.4 3.0 1.1 1 0 0 1 1 1 1 LysE type translocator RhodobacterPufX PF11511.8 NODE_83540_length_190_cov_3.141935_g75599_i0forward_frame_1 - 3.4 7.4 6.2 1.1 9.0 3.6 1.5 1 1 0 2 2 2 0 Intrinsic membrane protein PufX Lamprin PF06403.11 NODE_83539_length_190_cov_3.154839_g75598_i0reverse_frame_1 - 0.00055 19.9 22.1 0.017 15.1 10.2 2.0 1 1 1 2 2 2 2 Lamprin Cor1 PF04803.12 NODE_83531_length_190_cov_3.658065_g75590_i0forward_frame_1 - 0.015 15.5 6.9 0.017 15.3 6.9 1.1 1 0 0 1 1 1 0 Cor1/Xlr/Xmr conserved region Tup_N PF08581.10 NODE_83531_length_190_cov_3.658065_g75590_i0forward_frame_1 - 0.067 13.5 4.6 0.1 12.9 4.2 1.5 1 1 0 1 1 1 0 Tup N-terminal DUF2742 PF10888.8 NODE_83523_length_190_cov_6.400000_g75582_i0forward_frame_1 - 0.18 12.1 1.8 0.25 11.6 0.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2742) NDUF_B4 PF07225.12 NODE_83521_length_190_cov_15.503226_g75580_i0reverse_frame_1 - 0.02 14.8 1.7 0.027 14.4 1.7 1.4 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) Peptidase_S49_N PF08496.10 NODE_83521_length_190_cov_15.503226_g75580_i0reverse_frame_1 - 7.3 6.6 11.3 8.3 6.5 11.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal ISG65-75 PF11727.8 NODE_83519_length_190_cov_17.393548_g75578_i0reverse_frame_1 - 0.051 12.8 0.2 0.056 12.7 0.2 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein RST PF12174.8 NODE_83512_length_190_cov_19.948387_g75571_i0reverse_frame_1 - 0.045 13.7 2.2 0.066 13.1 2.2 1.4 1 1 0 1 1 1 0 RCD1-SRO-TAF4 (RST) plant domain Flagellar_put PF12611.8 NODE_83505_length_190_cov_27.741935_g75564_i0forward_frame_1 - 0.13 12.0 0.5 0.2 11.5 0.5 1.3 1 0 0 1 1 1 0 Putative flagellar DUF1176 PF06674.11 NODE_83504_length_190_cov_27.832258_g75563_i0forward_frame_1 - 0.038 13.4 0.0 0.038 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1176) TMEM190 PF15431.6 NODE_83501_length_190_cov_28.470968_g75560_i0forward_frame_1 - 0.43 10.7 1.6 0.48 10.6 1.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 190 LpxD PF04613.14 NODE_83496_length_190_cov_31.348387_g75555_i0reverse_frame_1 - 0.07 12.9 0.0 0.079 12.7 0.0 1.2 1 0 0 1 1 1 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GPR_Gpa2_C PF11970.8 NODE_83493_length_190_cov_33.967742_g75552_i0forward_frame_1 - 0.0093 16.0 0.1 0.014 15.4 0.1 1.4 1 0 0 1 1 1 1 G protein-coupled glucose receptor regulating Gpa2 C-term zf-RING_11 PF17123.5 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.06 13.1 0.0 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 RING-like zinc finger DUF3637 PF12337.8 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.16 12.3 1.3 1.9 8.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3637) TEP1_N PF05386.11 NODE_83491_length_190_cov_34.509677_g75550_i0forward_frame_1 - 0.0063 16.1 0.1 0.0086 15.6 0.1 1.2 1 0 0 1 1 1 1 TEP1 N-terminal domain DUF3473 PF11959.8 NODE_83483_length_190_cov_38.090323_g75542_i0forward_frame_1 - 0.024 14.7 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3473) UCH PF00443.29 NODE_83482_length_190_cov_38.838710_g75541_i0reverse_frame_1 - 0.006 16.1 0.2 0.0077 15.8 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PPO1_DWL PF12142.8 NODE_83481_length_190_cov_39.122581_g75540_i0forward_frame_1 - 0.06 13.1 0.1 0.084 12.7 0.1 1.3 1 0 0 1 1 1 0 Polyphenol oxidase middle domain TraF PF13728.6 NODE_83474_length_190_cov_44.212903_g75533_i0reverse_frame_1 - 0.18 11.6 0.9 0.19 11.5 0.9 1.2 1 1 0 1 1 1 0 F plasmid transfer operon protein ORC6 PF05460.13 NODE_83469_length_190_cov_49.006452_g75528_i0reverse_frame_1 - 0.032 13.5 1.3 0.034 13.4 1.3 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) T4-gp15_tss PF16724.5 NODE_83460_length_190_cov_61.574194_g75519_i0forward_frame_1 - 0.0018 18.1 0.0 0.002 17.9 0.0 1.0 1 0 0 1 1 1 1 T4-like virus Myoviridae tail sheath stabiliser UPF0542 PF15086.6 NODE_83459_length_190_cov_62.167742_g75518_i0forward_frame_1 - 0.44 10.5 2.8 0.63 10.0 2.8 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 SH3_15 PF18346.1 NODE_83455_length_190_cov_68.903226_g75514_i0forward_frame_1 - 0.22 11.8 0.0 0.26 11.7 0.0 1.1 1 0 0 1 1 1 0 Mind bomb SH3 repeat domain Abi_C PF14355.6 NODE_83452_length_190_cov_77.587097_g75511_i0reverse_frame_1 - 0.16 12.1 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Abortive infection C-terminus GlutR_N PF05201.15 NODE_83425_length_191_cov_0.891026_g75484_i0reverse_frame_1 - 0.058 13.2 0.0 0.062 13.1 0.0 1.1 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, N-terminal domain DUF2897 PF11446.8 NODE_83423_length_191_cov_0.923077_g75482_i0reverse_frame_1 - 2.4 8.1 8.8 0.35 10.8 1.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) ADAM_CR_2 PF17771.1 NODE_83416_length_191_cov_0.993590_g75475_i0forward_frame_1 - 0.044 14.3 0.0 0.045 14.3 0.0 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich domain zf-C4H2 PF10146.9 NODE_83412_length_191_cov_1.019231_g75471_i0reverse_frame_1 - 0.19 12.0 2.5 0.22 11.8 2.5 1.0 1 0 0 1 1 1 0 Zinc finger-containing protein PRIMA1 PF16101.5 NODE_83390_length_191_cov_1.025641_g75449_i0reverse_frame_1 - 0.34 11.0 5.1 0.38 10.8 5.1 1.0 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 DCA16 PF15349.6 NODE_83382_length_191_cov_1.025641_g75441_i0reverse_frame_1 - 0.15 11.6 0.2 0.16 11.5 0.2 1.0 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 Alb1 PF09135.11 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_1 - 0.15 13.0 1.7 0.17 12.8 1.7 1.1 1 0 0 1 1 1 0 Alb1 Chorion_2 PF03964.15 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_1 - 2.4 9.0 5.0 2.6 9.0 5.0 1.1 1 0 0 1 1 1 0 Chorion family 2 IQCJ-SCHIP1 PF15157.6 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_1 - 7 6.5 6.8 7.6 6.4 6.8 1.1 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif SR-25 PF10500.9 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_1 - 8 6.0 9.9 8.9 5.9 9.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3888 PF13027.6 NODE_83368_length_191_cov_1.025641_g75427_i0reverse_frame_1 - 0.048 14.1 0.0 0.064 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3888) Op_neuropeptide PF08035.11 NODE_83355_length_191_cov_1.025641_g75414_i0reverse_frame_1 - 0.15 11.9 0.4 0.22 11.4 0.4 1.3 1 0 0 1 1 1 0 Opioids neuropeptide AAA_lid_3 PF17862.1 NODE_83344_length_191_cov_1.025641_g75403_i0forward_frame_1 - 0.1 12.4 0.2 0.16 11.8 0.2 1.2 1 0 0 1 1 1 0 AAA+ lid domain NAD-GH PF10712.9 NODE_83340_length_191_cov_1.025641_g75399_i0reverse_frame_1 - 0.023 13.1 0.1 0.026 13.0 0.1 1.0 1 0 0 1 1 1 0 NAD-specific glutamate dehydrogenase VWA_CoxE PF05762.14 NODE_83339_length_191_cov_1.025641_g75398_i0reverse_frame_1 - 0.16 11.4 1.1 0.17 11.3 1.1 1.0 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein RIF5_SNase_2 PF18189.1 NODE_83337_length_191_cov_1.025641_g75396_i0forward_frame_1 - 0.15 11.8 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 TbRIF5 SNase domain 2 Pkinase PF00069.25 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 8.7e-17 61.3 0.0 8.9e-17 61.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 3.9e-12 46.0 0.0 4.1e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 0.00012 21.0 0.0 0.00012 21.0 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 0.00014 21.2 0.0 0.00014 21.2 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 0.02 13.9 0.0 0.02 13.9 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 0.087 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family SopA_C PF13979.6 NODE_83326_length_191_cov_1.102564_g75385_i0reverse_frame_1 - 0.048 13.4 0.1 0.049 13.4 0.1 1.1 1 0 0 1 1 1 0 SopA-like catalytic domain ThiP_synth PF10120.9 NODE_83322_length_191_cov_1.108974_g75381_i0reverse_frame_1 - 0.13 11.9 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Thiamine-phosphate synthase PRKCSH-like PF12999.7 NODE_83320_length_191_cov_1.121795_g75379_i0reverse_frame_1 - 0.012 15.5 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 0 Glucosidase II beta subunit-like DUF5645 PF18713.1 NODE_83319_length_191_cov_1.128205_g75378_i0reverse_frame_1 - 0.059 13.7 0.3 0.059 13.7 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5645) Chlam_OMP3 PF03503.13 NODE_83318_length_191_cov_1.128205_g75377_i0forward_frame_1 - 0.11 12.9 1.3 0.15 12.4 1.3 1.4 1 1 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 3 Inhibitor_I53 PF11714.8 NODE_83306_length_191_cov_1.185897_g75365_i0reverse_frame_1 - 0.39 11.0 5.3 0.18 12.0 3.5 1.4 1 1 1 2 2 2 0 Thrombin inhibitor Madanin TraW_N PF12477.8 NODE_83306_length_191_cov_1.185897_g75365_i0forward_frame_1 - 0.027 14.4 0.1 0.046 13.7 0.1 1.4 1 0 0 1 1 1 0 Sex factor F TraW protein N terminal Chlam_PMP PF02415.17 NODE_83303_length_191_cov_1.205128_g75362_i0reverse_frame_1 - 0.00087 19.6 7.1 0.0018 18.7 0.1 3.1 3 0 0 3 3 3 1 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat CARM1 PF11531.8 NODE_83294_length_191_cov_1.224359_g75353_i0reverse_frame_1 - 0.034 14.3 0.1 0.037 14.2 0.1 1.1 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal Planc_extracel PF07595.12 NODE_83294_length_191_cov_1.224359_g75353_i0forward_frame_1 - 0.0016 18.1 2.2 0.0035 17.0 2.2 1.6 1 0 0 1 1 1 1 Planctomycete extracellular PBP1_TM PF14812.6 NODE_83294_length_191_cov_1.224359_g75353_i0forward_frame_1 - 0.13 12.7 5.0 0.15 12.5 5.0 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF2857 PF11198.8 NODE_83289_length_191_cov_1.237179_g75348_i0forward_frame_1 - 0.013 15.3 0.1 0.014 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) FBA_2 PF07735.17 NODE_83283_length_191_cov_1.262821_g75342_i0reverse_frame_1 - 0.022 14.9 0.7 0.029 14.5 0.7 1.2 1 0 0 1 1 1 0 F-box associated Sua5_yciO_yrdC PF01300.18 NODE_83280_length_191_cov_1.275641_g75339_i0reverse_frame_1 - 8.1e-18 64.5 0.0 8.4e-18 64.5 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination cNMP_binding PF00027.29 NODE_83278_length_191_cov_1.275641_g75337_i0reverse_frame_1 - 2e-05 24.6 0.0 2.2e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain bZIP_1 PF00170.21 NODE_83277_length_191_cov_1.275641_g75336_i0forward_frame_1 - 0.22 11.7 3.5 6.5 6.9 0.8 2.1 2 0 0 2 2 2 0 bZIP transcription factor DUF5373 PF17343.2 NODE_83273_length_191_cov_1.282051_g75332_i0forward_frame_1 - 0.039 13.8 2.0 0.045 13.6 2.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5373) CPSase_L_D3 PF02787.19 NODE_83258_length_191_cov_1.307692_g75317_i0forward_frame_1 - 5.7e-14 52.5 0.0 5.7e-14 52.5 0.0 1.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DUF5560 PF17715.1 NODE_83257_length_191_cov_1.314103_g75316_i0reverse_frame_1 - 0.00055 19.4 1.6 0.00059 19.3 1.6 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5560) KRTAP PF11759.8 NODE_83251_length_191_cov_1.326923_g75310_i0forward_frame_1 - 0.047 14.2 7.9 0.055 14.0 7.9 1.1 1 0 0 1 1 1 0 Keratin-associated matrix Desulfoferrod_N PF06397.12 NODE_83248_length_191_cov_1.346154_g75307_i0reverse_frame_1 - 0.017 14.7 0.3 0.017 14.7 0.3 2.3 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Ste5_C PF12194.8 NODE_83242_length_191_cov_1.371795_g75301_i0reverse_frame_1 - 0.0046 16.9 0.1 0.0059 16.6 0.1 1.1 1 0 0 1 1 1 1 Protein kinase Fus3-binding RIH_assoc PF08454.11 NODE_83238_length_191_cov_1.403846_g75297_i0forward_frame_1 - 0.045 13.6 0.1 0.047 13.5 0.1 1.2 1 0 0 1 1 1 0 RyR and IP3R Homology associated UPF0139 PF03669.13 NODE_83237_length_191_cov_1.403846_g75296_i0forward_frame_1 - 0.0015 18.4 1.1 0.0015 18.3 1.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0139) NAGLU_N PF12971.7 NODE_83230_length_191_cov_1.435897_g75289_i0forward_frame_1 - 0.013 15.2 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain Herpes_US12 PF05363.12 NODE_83213_length_191_cov_1.506410_g75272_i0reverse_frame_1 - 0.075 13.8 0.3 0.092 13.5 0.3 1.2 1 0 0 1 1 1 0 Herpesvirus US12 family Kelch_1 PF01344.25 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 3.9e-11 42.3 0.1 4.7e-11 42.1 0.1 1.1 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 4.9e-09 36.2 0.1 6.1e-09 35.9 0.1 1.1 1 0 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 9.1e-09 35.1 0.3 9.1e-09 35.1 0.3 1.6 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 4.4e-08 33.0 0.0 6.9e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 6.3e-08 32.7 0.3 0.00011 22.4 0.1 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 1.1e-07 31.5 0.1 1.8e-07 30.9 0.1 1.3 1 0 0 1 1 1 1 Kelch motif DUF2237 PF09996.9 NODE_83204_length_191_cov_1.525641_g75263_i0forward_frame_1 - 0.14 12.2 0.1 0.2 11.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2237) DUF1280 PF06918.14 NODE_83203_length_191_cov_1.525641_g75262_i0reverse_frame_1 - 0.029 14.0 0.1 0.029 14.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1280) KH_dom-like PF14714.6 NODE_83203_length_191_cov_1.525641_g75262_i0reverse_frame_1 - 0.23 11.8 3.0 0.26 11.6 3.0 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DUF411 PF04214.13 NODE_83190_length_191_cov_1.538462_g75249_i0forward_frame_1 - 0.11 12.5 0.3 0.14 12.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF DUF5398 PF17376.2 NODE_83188_length_191_cov_1.538462_g75247_i0forward_frame_1 - 0.0062 17.1 3.4 0.0065 17.1 3.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5398) DEK_C PF08766.11 NODE_83188_length_191_cov_1.538462_g75247_i0forward_frame_1 - 0.046 13.7 0.2 0.046 13.7 0.2 1.7 2 0 0 2 2 2 0 DEK C terminal domain ATP_bind_1 PF03029.17 NODE_83188_length_191_cov_1.538462_g75247_i0forward_frame_1 - 0.07 12.9 0.1 0.071 12.9 0.1 1.0 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein LBR_tudor PF09465.10 NODE_83182_length_191_cov_1.538462_g75241_i0reverse_frame_1 - 0.047 13.5 0.0 0.057 13.2 0.0 1.2 1 0 0 1 1 1 0 Lamin-B receptor of TUDOR domain UPF0565 PF10561.9 NODE_83178_length_191_cov_1.538462_g75237_i0reverse_frame_1 - 0.044 13.0 0.9 0.049 12.8 0.9 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 TB2_DP1_HVA22 PF03134.19 NODE_83178_length_191_cov_1.538462_g75237_i0reverse_frame_1 - 0.066 13.1 4.9 0.079 12.9 4.9 1.1 1 0 0 1 1 1 0 TB2/DP1, HVA22 family Syntaxin_2 PF14523.6 NODE_83178_length_191_cov_1.538462_g75237_i0forward_frame_1 - 0.0081 16.5 2.6 0.0092 16.3 2.6 1.1 1 0 0 1 1 1 1 Syntaxin-like protein Fusion_gly PF00523.18 NODE_83178_length_191_cov_1.538462_g75237_i0forward_frame_1 - 0.077 11.2 1.1 0.087 11.1 1.1 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0 XPG_N PF00752.17 NODE_83177_length_191_cov_1.538462_g75236_i0reverse_frame_1 - 0.07 13.6 0.1 0.076 13.5 0.1 1.1 1 0 0 1 1 1 0 XPG N-terminal domain UPF0506 PF11703.8 NODE_83176_length_191_cov_1.538462_g75235_i0reverse_frame_1 - 0.02 15.2 6.4 0.025 15.0 6.4 1.2 1 0 0 1 1 1 0 UPF0506 DUF3854 PF12965.7 NODE_83169_length_191_cov_1.583333_g75228_i0reverse_frame_1 - 0.083 12.9 0.0 0.093 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) DnaJ_CXXCXGXG PF00684.19 NODE_83159_length_191_cov_1.660256_g75218_i0reverse_frame_1 - 0.042 14.2 0.1 0.054 13.9 0.1 1.3 1 0 0 1 1 1 0 DnaJ central domain Ion_trans PF00520.31 NODE_83158_length_191_cov_1.660256_g75217_i0forward_frame_1 - 3.2e-11 42.9 0.2 3.3e-11 42.9 0.2 1.0 1 0 0 1 1 1 1 Ion transport protein DUF3112 PF11309.8 NODE_83152_length_191_cov_1.692308_g75211_i0reverse_frame_1 - 0.018 14.5 0.1 0.019 14.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) MFS_1 PF07690.16 NODE_83150_length_191_cov_1.711538_g75209_i0reverse_frame_1 - 0.00057 18.9 5.1 0.0006 18.8 5.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4383 PF14325.6 NODE_83150_length_191_cov_1.711538_g75209_i0reverse_frame_1 - 0.032 14.5 0.8 0.036 14.3 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4383) O-ag_pol_Wzy PF14296.6 NODE_83144_length_191_cov_1.730769_g75203_i0reverse_frame_1 - 0.022 13.4 0.5 0.026 13.2 0.5 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy OSTbeta PF15048.6 NODE_83144_length_191_cov_1.730769_g75203_i0reverse_frame_1 - 0.04 14.0 0.4 0.042 14.0 0.4 1.1 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein EphA2_TM PF14575.6 NODE_83144_length_191_cov_1.730769_g75203_i0reverse_frame_1 - 0.05 14.5 0.0 0.06 14.2 0.0 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF2615 PF11027.8 NODE_83144_length_191_cov_1.730769_g75203_i0reverse_frame_1 - 0.056 13.6 0.3 0.062 13.4 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) DUF2205 PF10224.9 NODE_83135_length_191_cov_1.762821_g75194_i0forward_frame_1 - 0.075 13.0 0.2 0.1 12.6 0.2 1.2 1 0 0 1 1 1 0 Short coiled-coil protein DHC_N2 PF08393.13 NODE_83124_length_191_cov_1.820513_g75183_i0reverse_frame_1 - 1.1e-07 31.3 0.1 1.1e-07 31.3 0.1 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 HTH_Mga PF08280.11 NODE_83118_length_191_cov_1.923077_g75177_i0forward_frame_1 - 0.058 13.4 0.2 0.068 13.2 0.2 1.2 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain YbgT_YccB PF08173.11 NODE_83108_length_191_cov_1.967949_g75167_i0forward_frame_1 - 0.066 13.4 1.2 0.14 12.3 1.2 1.6 1 0 0 1 1 1 0 Membrane bound YbgT-like protein RTBV_P46 PF06216.11 NODE_83094_length_191_cov_2.038462_g75153_i0reverse_frame_1 - 0.071 12.0 0.1 0.071 12.0 0.1 1.0 1 0 0 1 1 1 0 Rice tungro bacilliform virus P46 protein UPF0552 PF10574.9 NODE_83089_length_191_cov_2.044872_g75148_i0reverse_frame_1 - 0.11 11.8 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Arp2/3-interacting proteins Arpin Peptidase_M73 PF12389.8 NODE_83082_length_191_cov_2.051282_g75141_i0forward_frame_1 - 0.095 12.5 0.0 0.1 12.4 0.0 1.0 1 0 0 1 1 1 0 Camelysin metallo-endopeptidase DUF2688 PF10892.8 NODE_83078_length_191_cov_2.083333_g75137_i0reverse_frame_1 - 0.0022 17.4 0.3 0.0052 16.2 0.3 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2688) Peptidase_C2 PF00648.21 NODE_83063_length_191_cov_2.230769_g75122_i0forward_frame_1 - 2.7e-14 52.9 0.0 2.8e-14 52.9 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Glyco_hydro_4C PF11975.8 NODE_83058_length_191_cov_2.282051_g75117_i0forward_frame_1 - 0.00032 20.8 0.0 0.00035 20.7 0.0 1.0 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain TetR_C_4 PF08359.11 NODE_83057_length_191_cov_2.288462_g75116_i0reverse_frame_1 - 0.0012 19.0 0.0 0.0012 19.0 0.0 1.1 1 0 0 1 1 1 1 YsiA-like protein, C-terminal region DNA_RNApol_7kD PF03604.13 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 1.8e-05 24.3 4.1 2.7e-05 23.7 4.1 1.2 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit OrfB_Zn_ribbon PF07282.11 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.00034 20.5 0.3 0.00039 20.3 0.3 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain C1_1 PF00130.22 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.00049 19.9 3.0 0.0006 19.6 3.0 1.1 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2318 PF10080.9 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.0065 16.6 1.6 0.0071 16.4 1.6 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2318) Sgf11 PF08209.11 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.0072 15.9 4.9 0.19 11.3 0.5 2.1 2 0 0 2 2 2 2 Sgf11 (transcriptional regulation protein) zf-ribbon_3 PF13248.6 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.0077 15.6 1.5 0.2 11.1 0.1 2.2 2 0 0 2 2 2 1 zinc-ribbon domain Prok-RING_1 PF14446.6 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.009 15.9 2.1 0.012 15.6 2.1 1.1 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 Ephrin_rec_like PF07699.13 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.052 13.3 0.8 0.065 13.0 0.8 1.2 1 0 0 1 1 1 0 Putative ephrin-receptor like zf-C2H2_3 PF13878.6 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.12 12.3 4.5 0.36 10.7 0.8 2.3 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-RING_7 PF02591.15 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 1.5 9.0 5.6 0.46 10.7 1.0 2.0 1 1 1 2 2 2 0 C4-type zinc ribbon domain zf-CCHC_6 PF15288.6 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 3.5 7.5 8.6 0.28 11.0 1.4 2.3 2 0 0 2 2 2 0 Zinc knuckle KASH PF10541.9 NODE_83050_length_191_cov_2.346154_g75109_i0reverse_frame_1 - 0.058 13.7 1.5 0.07 13.4 1.5 1.1 1 0 0 1 1 1 0 Nuclear envelope localisation domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks387.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks387.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks387.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks387.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2150 PF09920.9 NODE_83031_length_191_cov_2.692308_g75090_i0reverse_frame_1 - 0.098 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2150) DUF2197 PF09963.9 NODE_83019_length_191_cov_2.923077_g75078_i0forward_frame_1 - 0.096 13.0 0.1 0.14 12.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) DUF267 PF03268.14 NODE_83014_length_191_cov_3.038462_g75073_i0reverse_frame_1 - 1.6 7.5 5.3 1.9 7.3 5.3 1.0 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF267 Transposase_20 PF02371.16 NODE_83014_length_191_cov_3.038462_g75073_i0forward_frame_1 - 0.052 13.9 0.1 0.061 13.6 0.1 1.1 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family MORN PF02493.20 NODE_83011_length_191_cov_3.205128_g75070_i0forward_frame_1 - 2.2e-05 24.1 0.4 2.2e-05 24.1 0.4 2.2 3 0 0 3 3 3 1 MORN repeat Hfq PF17209.3 NODE_83005_length_191_cov_3.634615_g75064_i0forward_frame_1 - 3.9e-21 74.5 0.2 4.5e-21 74.3 0.2 1.1 1 0 0 1 1 1 1 Hfq protein LSM PF01423.22 NODE_83005_length_191_cov_3.634615_g75064_i0forward_frame_1 - 0.12 12.0 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 LSM domain Alpha_E1_glycop PF01589.16 NODE_82992_length_191_cov_16.506410_g75051_i0reverse_frame_1 - 0.08 11.6 0.0 0.08 11.6 0.0 1.0 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein DUF4560 PF15118.6 NODE_82988_length_191_cov_24.391026_g75047_i0reverse_frame_1 - 0.17 11.8 0.3 0.23 11.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4560) Pox_A21 PF05323.12 NODE_82975_length_191_cov_34.179487_g75034_i0reverse_frame_1 - 0.051 14.1 0.2 0.058 14.0 0.2 1.1 1 0 0 1 1 1 0 Poxvirus A21 Protein MDM10 PF12519.8 NODE_82974_length_191_cov_34.474359_g75033_i0reverse_frame_1 - 1.3 7.9 4.3 1.3 7.8 4.3 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 DUF3198 PF11433.8 NODE_82969_length_191_cov_40.480769_g75028_i0reverse_frame_1 - 0.049 13.5 0.2 0.077 12.9 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3198) SH2_2 PF14633.6 NODE_82969_length_191_cov_40.480769_g75028_i0reverse_frame_1 - 0.11 11.9 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 SH2 domain CfAFP PF05264.11 NODE_82965_length_191_cov_46.250000_g75024_i0reverse_frame_1 - 0.089 12.8 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Choristoneura fumiferana antifreeze protein (CfAFP) EVC2_like PF12297.8 NODE_82962_length_191_cov_48.923077_g75021_i0reverse_frame_1 - 0.14 10.8 1.1 0.12 11.0 1.1 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein TRSP PF12500.8 NODE_82945_length_191_cov_72.967949_g75004_i0reverse_frame_1 - 0.21 11.5 0.0 0.27 11.1 0.0 1.1 1 0 0 1 1 1 0 TRSP domain C terminus to PRTase_2 HnRNP_M PF11532.8 NODE_82933_length_191_cov_104.717949_g74992_i0forward_frame_1 - 1.1 9.6 6.8 1.7 8.9 6.8 1.4 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein M DUF4834 PF16118.5 NODE_82930_length_191_cov_117.743590_g74989_i0reverse_frame_1 - 0.064 14.2 0.0 0.069 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) SLC3A2_N PF16028.5 NODE_82928_length_191_cov_125.615385_g74987_i0forward_frame_1 - 0.17 11.5 2.5 0.17 11.5 1.8 1.5 1 1 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Defensin_3 PF08131.11 NODE_82924_length_191_cov_143.429487_g74983_i0reverse_frame_1 - 0.012 15.8 0.4 0.083 13.1 0.0 2.0 2 0 0 2 2 2 0 Defensin-like peptide family Band_7_C PF16200.5 NODE_82917_length_191_cov_172.378205_g74976_i0reverse_frame_1 - 0.042 13.9 0.0 0.049 13.7 0.0 1.1 1 0 0 1 1 1 0 C-terminal region of band_7 SIR2 PF02146.17 NODE_82917_length_191_cov_172.378205_g74976_i0reverse_frame_1 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Sir2 family Osw5 PF17062.5 NODE_82911_length_191_cov_1313.448718_g74970_i0forward_frame_1 - 0.22 11.6 9.2 0.24 11.5 9.2 1.1 1 0 0 1 1 1 0 Outer spore wall 5 Babuvirus_MP PF07234.11 NODE_82910_length_191_cov_1880.762821_g74969_i0forward_frame_1 - 4.2 7.6 5.4 5.3 7.3 5.4 1.2 1 0 0 1 1 1 0 Movement and RNA silencing protein Peptidase_C2 PF00648.21 NODE_82904_length_192_cov_0.834395_g74963_i0reverse_frame_1 - 6.3e-10 38.6 0.0 6.5e-10 38.5 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease AlphaC_C PF17480.2 NODE_82897_length_192_cov_0.936306_g74956_i0reverse_frame_1 - 0.042 13.9 0.2 0.056 13.5 0.2 1.2 1 0 0 1 1 1 0 AlphaC C-terminal Lum_binding PF00677.17 NODE_82893_length_192_cov_0.968153_g74952_i0forward_frame_1 - 1.2e-05 25.2 0.7 0.00029 20.8 0.1 2.0 2 0 0 2 2 2 2 Lumazine binding domain DUF411 PF04214.13 NODE_82893_length_192_cov_0.968153_g74952_i0forward_frame_1 - 0.00079 19.3 0.0 0.001 19.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF Ion_trans PF00520.31 NODE_82886_length_192_cov_1.006369_g74945_i0forward_frame_1 - 0.00019 20.7 0.5 0.00022 20.5 0.5 1.0 1 0 0 1 1 1 1 Ion transport protein DUF3641 PF12345.8 NODE_82875_length_192_cov_1.012739_g74934_i0forward_frame_1 - 0.12 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3641) Vint PF14623.6 NODE_82865_length_192_cov_1.012739_g74924_i0reverse_frame_1 - 0.11 12.3 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Hint-domain COX4_pro_2 PF07835.12 NODE_82864_length_192_cov_1.012739_g74923_i0forward_frame_1 - 0.084 13.0 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Bacterial aa3 type cytochrome c oxidase subunit IV DUF4051 PF13260.6 NODE_82851_length_192_cov_1.019108_g74910_i0forward_frame_1 - 4.3 7.2 7.9 6.4 6.6 7.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) NOA36 PF06524.12 NODE_82846_length_192_cov_1.019108_g74905_i0reverse_frame_1 - 0.2 10.9 0.0 0.21 10.9 0.0 1.0 1 0 0 1 1 1 0 NOA36 protein DUF2367 PF10164.9 NODE_82845_length_192_cov_1.019108_g74904_i0forward_frame_1 - 0.76 10.3 4.9 0.95 10.0 4.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) Vma12 PF11712.8 NODE_82840_length_192_cov_1.019108_g74899_i0forward_frame_1 - 6.3 6.9 7.9 7.6 6.6 7.9 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase zf-RING_6 PF14835.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 6.6e-06 25.9 5.2 6.6e-06 25.9 5.2 1.8 2 0 0 2 2 2 1 zf-RING of BARD1-type protein zf-RING_UBOX PF13445.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 2.6e-05 24.1 11.4 4.5e-05 23.4 11.4 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 3.1e-05 23.7 10.1 3.1e-05 23.7 10.1 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 7.2e-05 22.6 10.1 0.00013 21.8 10.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.00013 21.8 10.1 0.00027 20.8 10.1 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.0032 17.6 11.0 0.0032 17.6 11.0 1.5 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-Nse PF11789.8 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.0054 16.5 0.8 0.0067 16.2 0.8 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_2 PF13639.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.013 15.8 10.9 0.013 15.8 10.9 1.6 2 0 0 2 2 2 0 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.033 14.0 8.7 0.033 14.0 8.7 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.091 12.9 9.0 0.15 12.2 9.0 1.4 1 0 0 1 1 1 0 zinc RING finger of MSL2 Ribosomal_L24e PF01246.20 NODE_82820_length_192_cov_1.019108_g74879_i0reverse_frame_1 - 0.015 15.5 0.2 0.02 15.1 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein L24e CENP-P PF13096.6 NODE_82814_length_192_cov_1.038217_g74873_i0forward_frame_1 - 0.08 12.6 0.3 0.079 12.7 0.3 1.2 1 0 0 1 1 1 0 CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P DUF3848 PF12959.7 NODE_82801_length_192_cov_1.140127_g74860_i0reverse_frame_1 - 0.056 13.5 0.1 0.062 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3848) NMT PF01233.19 NODE_82800_length_192_cov_1.146497_g74859_i0forward_frame_1 - 0.11 12.3 0.1 0.13 12.1 0.1 1.0 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain PAC4 PF16093.5 NODE_82792_length_192_cov_1.171975_g74851_i0reverse_frame_1 - 0.09 13.0 0.0 0.09 13.0 0.0 1.1 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Sulfotransfer_3 PF13469.6 NODE_82792_length_192_cov_1.171975_g74851_i0reverse_frame_1 - 0.095 13.1 0.3 0.12 12.8 0.3 1.1 1 0 0 1 1 1 0 Sulfotransferase family Ac110_PIF PF07280.11 NODE_82790_length_192_cov_1.171975_g74849_i0forward_frame_1 - 1.1 9.1 6.1 0.26 11.1 2.2 1.8 2 0 0 2 2 2 0 Per os infectivity factor AC110 DUF2142 PF09913.9 NODE_82787_length_192_cov_1.197452_g74846_i0reverse_frame_1 - 0.025 13.5 0.9 0.03 13.2 0.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) DUF1593 PF07632.11 NODE_82783_length_192_cov_1.248408_g74842_i0forward_frame_1 - 0.12 11.7 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1593) tRNA_anti-codon PF01336.25 NODE_82781_length_192_cov_1.267516_g74840_i0forward_frame_1 - 4.2e-13 49.1 0.0 4.8e-13 48.9 0.0 1.0 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain SNAD2 PF18745.1 NODE_82776_length_192_cov_1.267516_g74835_i0forward_frame_1 - 0.044 13.5 0.0 0.047 13.4 0.0 1.0 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 2 Zwilch PF09817.9 NODE_82776_length_192_cov_1.267516_g74835_i0forward_frame_1 - 0.26 9.7 0.0 0.29 9.5 0.0 1.0 1 0 0 1 1 1 0 RZZ complex, subunit zwilch TMEM40 PF15817.5 NODE_82759_length_192_cov_1.273885_g74818_i0forward_frame_1 - 0.16 11.8 1.2 0.17 11.7 1.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 40 family Gln-synt_N PF03951.19 NODE_82752_length_192_cov_1.318471_g74811_i0reverse_frame_1 - 0.11 12.3 0.1 0.15 11.9 0.1 1.3 1 1 0 1 1 1 0 Glutamine synthetase, beta-Grasp domain AF-4 PF05110.13 NODE_82750_length_192_cov_1.324841_g74809_i0forward_frame_1 - 0.83 7.7 8.8 0.91 7.5 8.8 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein SMYLE_N PF18615.1 NODE_82747_length_192_cov_1.337580_g74806_i0reverse_frame_1 - 0.098 12.2 0.1 0.11 12.0 0.1 1.0 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain OB_MalK PF17912.1 NODE_82744_length_192_cov_1.343949_g74803_i0forward_frame_1 - 2.1e-05 25.3 0.1 3.9e-05 24.4 0.1 1.5 2 0 0 2 2 2 1 MalK OB fold domain TOBE_2 PF08402.10 NODE_82744_length_192_cov_1.343949_g74803_i0forward_frame_1 - 0.0002 21.4 0.0 0.00028 21.0 0.0 1.2 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 NODE_82744_length_192_cov_1.343949_g74803_i0forward_frame_1 - 0.013 16.1 0.0 0.019 15.5 0.0 1.3 1 0 0 1 1 1 0 CysA C-terminal regulatory domain IBV_3A PF03617.13 NODE_82739_length_192_cov_1.363057_g74798_i0forward_frame_1 - 0.058 13.4 0.0 0.078 13.0 0.0 1.2 1 0 0 1 1 1 0 IBV 3A protein Transposase_20 PF02371.16 NODE_82726_length_192_cov_1.433121_g74785_i0reverse_frame_1 - 0.05 13.9 0.0 0.057 13.7 0.0 1.1 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family Ploopntkinase2 PF18747.1 NODE_82710_length_192_cov_1.490446_g74769_i0reverse_frame_1 - 0.11 11.8 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 P-loop Nucleotide Kinase2 DUF155 PF02582.14 NODE_82704_length_192_cov_1.509554_g74763_i0reverse_frame_1 - 0.046 13.8 0.4 1 9.5 0.0 2.0 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Equine_IAV_S2 PF06502.11 NODE_82704_length_192_cov_1.509554_g74763_i0reverse_frame_1 - 0.72 10.0 3.6 15 5.8 0.4 2.0 1 1 1 2 2 2 0 Equine infectious anaemia virus S2 protein UvrD_C_2 PF13538.6 NODE_82691_length_192_cov_1.528662_g74750_i0reverse_frame_1 - 0.0014 18.4 0.0 0.0017 18.1 0.0 1.3 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C PF13361.6 NODE_82691_length_192_cov_1.528662_g74750_i0reverse_frame_1 - 0.014 14.8 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain Serglycin PF04360.12 NODE_82682_length_192_cov_1.528662_g74741_i0forward_frame_1 - 0.2 11.6 0.5 0.21 11.6 0.5 1.2 1 0 0 1 1 1 0 Serglycin K_channel_TID PF07941.11 NODE_82682_length_192_cov_1.528662_g74741_i0forward_frame_1 - 0.92 10.0 8.3 1.2 9.6 8.3 1.1 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain Androgen_recep PF02166.16 NODE_82682_length_192_cov_1.528662_g74741_i0forward_frame_1 - 2.1 7.1 5.5 2.2 7.1 5.5 1.0 1 0 0 1 1 1 0 Androgen receptor DUF4303 PF14136.6 NODE_82667_length_192_cov_1.592357_g74726_i0forward_frame_1 - 0.1 12.3 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) ScsC_N PF18312.1 NODE_82663_length_192_cov_1.605096_g74722_i0forward_frame_1 - 0.26 11.2 0.8 0.39 10.6 0.8 1.2 1 0 0 1 1 1 0 Copper resistance protein ScsC N-terminal domain DUF268 PF03269.14 NODE_82658_length_192_cov_1.617834_g74717_i0forward_frame_1 - 0.1 12.5 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF268 Atrophin-1 PF03154.15 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_1 - 0.02 13.2 3.2 0.019 13.3 3.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family Sgf11_N PF18519.1 NODE_82627_length_192_cov_1.777070_g74686_i0forward_frame_1 - 0.1 12.2 0.4 0.15 11.6 0.4 1.2 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain S-AdoMet_synt_N PF00438.20 NODE_82621_length_192_cov_1.815287_g74680_i0forward_frame_1 - 2.3e-25 89.1 0.2 2.5e-25 89.0 0.2 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain Pkr1 PF08636.10 NODE_82617_length_192_cov_1.840764_g74676_i0reverse_frame_1 - 0.42 10.8 4.5 0.99 9.6 0.5 2.0 1 1 1 2 2 2 0 ER protein Pkr1 SHMT PF00464.19 NODE_82616_length_192_cov_1.840764_g74675_i0forward_frame_1 - 3.3e-19 68.8 0.0 3.4e-19 68.7 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase DUF2791 PF10923.8 NODE_82607_length_192_cov_1.923567_g74666_i0forward_frame_1 - 0.18 10.6 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) SART-1 PF03343.13 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_1 - 0.026 13.1 2.4 0.024 13.2 2.4 1.0 1 0 0 1 1 1 0 SART-1 family Rubella_Capsid PF05750.11 NODE_82603_length_192_cov_1.980892_g74662_i0forward_frame_1 - 0.1 12.2 0.1 0.11 12.1 0.1 1.0 1 0 0 1 1 1 0 Rubella capsid protein Nitr_red_alph_N PF14710.6 NODE_82596_length_192_cov_2.006369_g74655_i0reverse_frame_1 - 0.18 12.3 3.2 3.1 8.3 3.2 2.1 1 1 0 1 1 1 0 Respiratory nitrate reductase alpha N-terminal PCDO_beta_N PF12391.8 NODE_82595_length_192_cov_2.012739_g74654_i0forward_frame_1 - 0.054 13.1 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Protocatechuate 3,4-dioxygenase beta subunit N terminal RIH_assoc PF08454.11 NODE_82594_length_192_cov_2.012739_g74653_i0forward_frame_1 - 0.085 12.7 0.1 0.09 12.6 0.1 1.1 1 0 0 1 1 1 0 RyR and IP3R Homology associated Acp26Ab PF05777.12 NODE_82587_length_192_cov_2.050955_g74646_i0reverse_frame_1 - 0.13 12.9 4.3 0.15 12.7 4.3 1.1 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) IQ PF00612.27 NODE_82586_length_192_cov_2.057325_g74645_i0forward_frame_1 - 8.2e-06 25.2 0.2 8.2e-06 25.2 0.2 1.7 2 0 0 2 2 2 1 IQ calmodulin-binding motif PFOR_II PF17147.4 NODE_82582_length_192_cov_2.101911_g74641_i0forward_frame_1 - 0.011 16.0 0.0 0.012 15.8 0.0 1.0 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II DUF2817 PF10994.8 NODE_82582_length_192_cov_2.101911_g74641_i0forward_frame_1 - 0.11 11.8 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2817) DUF1440 PF07274.12 NODE_82580_length_192_cov_2.121019_g74639_i0forward_frame_1 - 0.069 13.5 0.1 0.076 13.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1440) RelB PF04221.12 NODE_82579_length_192_cov_2.121019_g74638_i0reverse_frame_1 - 0.03 14.3 0.6 0.037 14.0 0.6 1.2 1 0 0 1 1 1 0 RelB antitoxin DUF4694 PF15765.5 NODE_82577_length_192_cov_2.222930_g74636_i0forward_frame_1 - 0.11 12.5 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) Rab_eff_C PF04698.12 NODE_82574_length_192_cov_2.242038_g74633_i0reverse_frame_1 - 0.089 11.1 0.1 0.096 11.0 0.1 1.0 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus TetR_C_5 PF08360.11 NODE_82571_length_192_cov_2.267516_g74630_i0forward_frame_1 - 0.088 13.0 0.0 0.094 12.9 0.0 1.1 1 0 0 1 1 1 0 QacR-like protein, C-terminal region HigB-like_toxin PF05015.13 NODE_82569_length_192_cov_2.280255_g74628_i0reverse_frame_1 - 0.1 13.0 0.1 0.11 12.9 0.1 1.1 1 0 0 1 1 1 0 RelE-like toxin of type II toxin-antitoxin system HigB zf-C4_Topoisom PF01396.19 NODE_82558_length_192_cov_2.439490_g74617_i0forward_frame_1 - 1.1e-07 31.4 1.2 1.9e-07 30.7 1.2 1.4 1 1 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger Zn_ribbon_recom PF13408.6 NODE_82558_length_192_cov_2.439490_g74617_i0forward_frame_1 - 0.0044 17.5 0.0 0.0052 17.3 0.0 1.1 1 0 0 1 1 1 1 Recombinase zinc beta ribbon domain GSG-1 PF07803.11 NODE_82558_length_192_cov_2.439490_g74617_i0forward_frame_1 - 0.048 13.6 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 GSG1-like protein Cnl2_NKP2 PF09447.10 NODE_82556_length_192_cov_2.458599_g74615_i0reverse_frame_1 - 0.06 13.5 0.0 0.073 13.2 0.0 1.2 1 0 0 1 1 1 0 Cnl2/NKP2 family protein YqhR PF11085.8 NODE_82554_length_192_cov_2.496815_g74613_i0reverse_frame_1 - 0.1 12.5 0.4 0.098 12.6 0.4 1.1 1 0 0 1 1 1 0 Conserved membrane protein YqhR TT_ORF2a PF08197.11 NODE_82548_length_192_cov_2.656051_g74607_i0reverse_frame_1 - 0.014 15.4 0.2 0.022 14.8 0.2 1.3 1 0 0 1 1 1 0 pORF2a truncated protein zf-ribbon_3 PF13248.6 NODE_82546_length_192_cov_2.675159_g74605_i0forward_frame_1 - 0.031 13.7 0.2 0.057 12.8 0.2 1.4 1 0 0 1 1 1 0 zinc-ribbon domain GAGA PF09237.11 NODE_82546_length_192_cov_2.675159_g74605_i0forward_frame_1 - 0.069 13.0 1.2 0.069 13.0 0.1 1.5 2 0 0 2 2 2 0 GAGA factor TF_Zn_Ribbon PF08271.12 NODE_82546_length_192_cov_2.675159_g74605_i0forward_frame_1 - 0.079 12.5 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding DUF1799 PF08809.11 NODE_82541_length_192_cov_2.802548_g74600_i0reverse_frame_1 - 0.11 12.7 0.3 0.14 12.3 0.3 1.1 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) TMEM174 PF15029.6 NODE_82536_length_192_cov_2.993631_g74595_i0reverse_frame_1 - 0.033 13.9 0.0 0.037 13.7 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 174 NMU PF02070.15 NODE_82534_length_192_cov_3.012739_g74593_i0reverse_frame_1 - 0.19 11.6 0.3 0.19 11.6 0.3 2.1 3 0 0 3 3 3 0 Neuromedin U DUF1580 PF07618.11 NODE_82532_length_192_cov_3.095541_g74591_i0forward_frame_1 - 0.46 10.1 5.6 0.74 9.5 5.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) Glyco_trans_4_3 PF12000.8 NODE_82528_length_192_cov_3.662420_g74587_i0reverse_frame_1 - 0.088 12.5 0.1 0.088 12.5 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 4 group Ada_Zn_binding PF02805.16 NODE_82525_length_192_cov_4.089172_g74584_i0reverse_frame_1 - 1.2e-05 25.2 0.8 1.9e-05 24.6 0.8 1.3 1 0 0 1 1 1 1 Metal binding domain of Ada zf_Rg PF17915.1 NODE_82525_length_192_cov_4.089172_g74584_i0reverse_frame_1 - 0.13 11.7 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Reverse gyrase zinc finger DUF1660 PF07874.11 NODE_82525_length_192_cov_4.089172_g74584_i0reverse_frame_1 - 0.16 12.5 0.0 0.2 12.2 0.0 1.2 1 0 0 1 1 1 0 Prophage protein (DUF1660) DUF929 PF06053.11 NODE_82521_length_192_cov_5.458599_g74580_i0reverse_frame_1 - 0.03 13.6 0.3 0.031 13.6 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF929) BRF1 PF07741.13 NODE_82516_length_192_cov_12.280255_g74575_i0forward_frame_1 - 0.16 12.3 6.2 0.18 12.1 6.2 1.1 1 0 0 1 1 1 0 Brf1-like TBP-binding domain ABC2_membrane_3 PF12698.7 NODE_82512_length_192_cov_20.732484_g74571_i0forward_frame_1 - 0.13 11.4 1.9 0.14 11.3 1.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Cullin_Nedd8 PF10557.9 NODE_82510_length_192_cov_23.630573_g74569_i0reverse_frame_1 - 0.017 15.1 0.8 0.025 14.6 0.8 1.3 1 0 0 1 1 1 0 Cullin protein neddylation domain Archaeal_AmoA PF12942.7 NODE_82510_length_192_cov_23.630573_g74569_i0forward_frame_1 - 0.078 12.7 0.8 0.089 12.5 0.8 1.0 1 0 0 1 1 1 0 Archaeal ammonia monooxygenase subunit A (AmoA) PMD PF10536.9 NODE_82508_length_192_cov_24.840764_g74567_i0reverse_frame_1 - 0.1 11.7 0.0 0.1 11.7 0.0 1.0 1 0 0 1 1 1 0 Plant mobile domain HTH_ParB PF17762.1 NODE_82495_length_192_cov_33.528662_g74554_i0reverse_frame_1 - 0.094 12.5 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 HTH domain found in ParB protein TRAP-gamma PF07074.12 NODE_82475_length_192_cov_46.936306_g74534_i0reverse_frame_1 - 0.27 10.8 0.9 0.32 10.6 0.9 1.1 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DNA_meth_N PF18284.1 NODE_82474_length_192_cov_46.961783_g74533_i0forward_frame_1 - 0.019 14.9 0.4 0.033 14.1 0.2 1.5 1 1 0 1 1 1 0 DNA methylase N-terminal domain DUF5359 PF17313.2 NODE_82472_length_192_cov_48.210191_g74531_i0forward_frame_1 - 0.0091 16.0 0.3 0.011 15.7 0.3 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5359) DUF2162 PF09930.9 NODE_82471_length_192_cov_48.350318_g74530_i0forward_frame_1 - 0.017 14.6 0.0 0.018 14.5 0.0 1.0 1 0 0 1 1 1 0 Predicted transporter (DUF2162) Pox_E6 PF04656.12 NODE_82462_length_192_cov_55.624204_g74521_i0reverse_frame_1 - 0.26 9.7 2.1 0.28 9.6 2.1 1.0 1 0 0 1 1 1 0 Pox virus E6 protein Amino_oxidase PF01593.24 NODE_82458_length_192_cov_74.127389_g74517_i0forward_frame_1 - 8.3e-07 28.6 0.1 8.3e-07 28.6 0.1 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Augurin PF15187.6 NODE_82456_length_192_cov_77.700637_g74515_i0reverse_frame_1 - 0.13 12.5 2.5 0.14 12.4 2.5 1.1 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 DUF2630 PF10944.8 NODE_82446_length_192_cov_101.248408_g74505_i0reverse_frame_1 - 0.11 12.9 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) Dimerisation PF08100.11 NODE_82446_length_192_cov_101.248408_g74505_i0forward_frame_1 - 0.067 13.2 1.1 0.083 12.9 0.3 1.6 2 0 0 2 2 2 0 Dimerisation domain DUF3510 PF12022.8 NODE_82446_length_192_cov_101.248408_g74505_i0forward_frame_1 - 0.12 12.7 0.1 0.17 12.3 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3510) MHCassoc_trimer PF08831.10 NODE_82440_length_192_cov_184.445860_g74499_i0reverse_frame_1 - 0.005 16.8 2.2 0.075 13.0 0.3 2.0 1 1 1 2 2 2 2 Class II MHC-associated invariant chain trimerisation domain Adeno_E3A PF05248.12 NODE_82432_length_193_cov_0.797468_g74491_i0reverse_frame_3 - 0.0072 16.3 0.1 0.0084 16.1 0.1 1.0 1 0 0 1 1 1 1 Adenovirus E3A RVT_N PF13655.6 NODE_82432_length_193_cov_0.797468_g74491_i0forward_frame_3 - 0.12 12.6 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of reverse transcriptase WD40 PF00400.32 NODE_82430_length_193_cov_0.835443_g74489_i0forward_frame_3 - 4.7e-06 27.2 0.2 4.7e-06 27.2 0.2 2.4 3 0 0 3 3 3 1 WD domain, G-beta repeat SAP25 PF15476.6 NODE_82428_length_193_cov_0.867089_g74487_i0forward_frame_3 - 0.018 14.7 0.1 0.02 14.6 0.1 1.0 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP25 Co_AT_N PF12557.8 NODE_82423_length_193_cov_0.949367_g74482_i0forward_frame_3 - 0.12 12.3 3.6 0.17 11.9 3.6 1.2 1 0 0 1 1 1 0 Cob(I)alamin adenosyltransferase N terminal PTS_2-RNA PF01885.16 NODE_82422_length_193_cov_0.955696_g74481_i0reverse_frame_3 - 4.4e-05 23.6 0.0 5e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family VPDSG-CTERM PF18205.1 NODE_82419_length_193_cov_0.987342_g74478_i0forward_frame_3 - 0.19 11.6 2.4 1.1 9.2 0.6 2.2 2 0 0 2 2 2 0 VPDSG-CTERM motif bact-PGI_C PF10432.9 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_2 - 0.081 13.0 0.0 0.081 13.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial phospho-glucose isomerase C-terminal SIS domain NOC3p PF07540.11 NODE_82412_length_193_cov_0.993671_g74471_i0reverse_frame_2 - 0.077 13.5 0.1 0.085 13.3 0.1 1.1 1 0 0 1 1 1 0 Nucleolar complex-associated protein PsbN PF02468.15 NODE_82412_length_193_cov_0.993671_g74471_i0forward_frame_2 - 4.3 7.3 6.7 17 5.3 0.2 2.8 3 0 0 3 3 3 0 Photosystem II reaction centre N protein (psbN) DUF1402 PF07182.11 NODE_82411_length_193_cov_0.993671_g74470_i0reverse_frame_2 - 0.092 11.8 0.0 0.094 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1402) DUF3040 PF11239.8 NODE_82410_length_193_cov_1.000000_g74469_i0forward_frame_3 - 0.067 13.5 0.0 0.076 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) Mucin PF01456.17 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_3 - 0.35 10.9 15.3 0.36 10.8 15.3 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein 7TM_GPCR_Srv PF10323.9 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_2 - 4.8 6.4 20.2 5.8 6.2 20.2 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srv Gag_p12 PF01141.18 NODE_82402_length_193_cov_1.006329_g74461_i0reverse_frame_3 - 0.09 13.1 0.1 0.096 13.0 0.1 1.1 1 0 0 1 1 1 0 Gag polyprotein, inner coat protein p12 GP79 PF17463.2 NODE_82401_length_193_cov_1.006329_g74460_i0reverse_frame_2 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Gene product 79 Disintegrin PF00200.23 NODE_82399_length_193_cov_1.006329_g74458_i0reverse_frame_2 - 0.031 15.1 2.3 0.034 14.9 2.3 1.1 1 0 0 1 1 1 0 Disintegrin Cyt-b5 PF00173.28 NODE_82397_length_193_cov_1.006329_g74456_i0reverse_frame_3 - 0.018 15.2 0.0 0.025 14.7 0.0 1.3 1 0 0 1 1 1 0 Cytochrome b5-like Heme/Steroid binding domain MFA1_2 PF17317.2 NODE_82395_length_193_cov_1.006329_g74454_i0forward_frame_3 - 0.27 11.1 3.1 0.62 9.9 0.5 2.6 3 0 0 3 3 3 0 Mating hormone A-factor 1&2 PIP49_N PF14875.6 NODE_82387_length_193_cov_1.012658_g74446_i0forward_frame_3 - 0.4 10.5 3.8 0.46 10.3 3.8 1.1 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 Bd3614_N PF14442.6 NODE_82386_length_193_cov_1.012658_g74445_i0reverse_frame_3 - 0.17 12.2 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Bd3614-like deaminase N-terminal COOH-NH2_lig PF14395.6 NODE_82384_length_193_cov_1.012658_g74443_i0forward_frame_2 - 0.11 11.7 0.5 0.11 11.7 0.5 1.0 1 0 0 1 1 1 0 Phage phiEco32-like COOH.NH2 ligase-type 2 Cir_N PF10197.9 NODE_82384_length_193_cov_1.012658_g74443_i0forward_frame_2 - 0.72 10.1 3.7 11 6.2 0.1 2.2 2 0 0 2 2 2 0 N-terminal domain of CBF1 interacting co-repressor CIR T_cell_tran_alt PF15128.6 NODE_82373_length_193_cov_1.012658_g74432_i0reverse_frame_3 - 0.074 12.9 0.7 0.086 12.6 0.7 1.1 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF4164 PF13747.6 NODE_82373_length_193_cov_1.012658_g74432_i0forward_frame_2 - 0.1 12.9 2.9 0.12 12.6 2.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) LAX PF15681.5 NODE_82368_length_193_cov_1.012658_g74427_i0forward_frame_3 - 0.045 12.6 0.1 0.051 12.4 0.1 1.0 1 0 0 1 1 1 0 Lymphocyte activation family X Acetyltransf_15 PF17013.5 NODE_82367_length_193_cov_1.012658_g74426_i0reverse_frame_3 - 0.013 15.0 2.6 0.014 14.8 2.6 1.0 1 0 0 1 1 1 0 Putative acetyl-transferase RelE PF06296.12 NODE_82366_length_193_cov_1.012658_g74425_i0forward_frame_2 - 0.14 12.3 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 RelE toxin of RelE / RelB toxin-antitoxin system FR47 PF08445.10 NODE_82365_length_193_cov_1.012658_g74424_i0forward_frame_3 - 0.12 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 FR47-like protein His_Phos_2 PF00328.22 NODE_82362_length_193_cov_1.012658_g74421_i0reverse_frame_2 - 0.048 13.0 0.1 0.05 13.0 0.1 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) UNC119_bdg PF15435.6 NODE_82354_length_193_cov_1.050633_g74413_i0reverse_frame_3 - 0.063 12.8 0.3 0.065 12.8 0.3 1.0 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue Sugar_tr PF00083.24 NODE_82351_length_193_cov_1.069620_g74410_i0forward_frame_2 - 0.0099 14.8 5.8 0.011 14.6 5.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_82351_length_193_cov_1.069620_g74410_i0forward_frame_2 - 0.014 14.3 3.2 0.015 14.2 3.2 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily Pex24p PF06398.11 NODE_82351_length_193_cov_1.069620_g74410_i0forward_frame_2 - 1.6 7.6 5.2 1.7 7.6 5.2 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin VATC PF18716.1 NODE_82350_length_193_cov_1.069620_g74409_i0reverse_frame_3 - 0.06 13.2 0.1 0.081 12.8 0.1 1.2 1 0 0 1 1 1 0 Vms1-associating treble clef domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks388.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks388.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks388.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks388.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:31:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4131 PF13567.6 NODE_82349_length_193_cov_1.075949_g74408_i0reverse_frame_3 - 2.1 8.0 6.7 2.4 7.8 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Fusion_gly PF00523.18 NODE_82349_length_193_cov_1.075949_g74408_i0forward_frame_2 - 6.2 5.0 9.4 6.7 4.8 9.4 1.1 1 0 0 1 1 1 0 Fusion glycoprotein F0 RBD PF02196.15 NODE_82344_length_193_cov_1.101266_g74403_i0reverse_frame_2 - 0.19 11.9 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Raf-like Ras-binding domain TMEM171 PF15471.6 NODE_82339_length_193_cov_1.151899_g74398_i0reverse_frame_3 - 1.8 7.5 3.3 1.9 7.4 3.3 1.0 1 0 0 1 1 1 0 Transmembrane protein family 171 SR-25 PF10500.9 NODE_82339_length_193_cov_1.151899_g74398_i0reverse_frame_2 - 1.7 8.2 7.3 2 8.0 7.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4513 PF14983.6 NODE_82334_length_193_cov_1.183544_g74393_i0forward_frame_2 - 0.059 13.5 0.0 0.059 13.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4513) BfiI_DBD PF18243.1 NODE_82327_length_193_cov_1.196203_g74386_i0reverse_frame_3 - 0.12 11.9 0.3 0.13 11.9 0.3 1.0 1 0 0 1 1 1 0 Metal-independent restriction enzyme BfiI DNA binding domain Avian_gp85 PF03708.14 NODE_82326_length_193_cov_1.196203_g74385_i0forward_frame_2 - 0.055 12.6 0.0 0.066 12.4 0.0 1.0 1 0 0 1 1 1 0 Avian retrovirus envelope protein, gp85 Ibs_toxin PF13956.6 NODE_82326_length_193_cov_1.196203_g74385_i0forward_frame_2 - 5.9 7.0 17.3 0.55 10.3 2.6 3.4 3 0 0 3 3 3 0 Toxin Ibs, type I toxin-antitoxin system XdhC_CoxI PF02625.16 NODE_82325_length_193_cov_1.202532_g74384_i0forward_frame_2 - 0.03 14.5 0.2 0.033 14.4 0.2 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Hum_adeno_E3A PF05393.11 NODE_82323_length_193_cov_1.208861_g74382_i0forward_frame_2 - 0.2 11.6 0.3 0.47 10.5 0.2 1.6 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein Dimer_Tnp_hAT PF05699.14 NODE_82318_length_193_cov_1.227848_g74377_i0forward_frame_3 - 0.024 14.4 0.2 0.03 14.1 0.2 1.1 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region Par3_HAL_N_term PF12053.8 NODE_82316_length_193_cov_1.253165_g74375_i0forward_frame_3 - 0.18 12.0 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 N-terminal of Par3 and HAL proteins Ribosomal_S18 PF01084.20 NODE_82312_length_193_cov_1.259494_g74371_i0forward_frame_3 - 0.025 14.8 0.1 0.038 14.2 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S18 Nairovirus_M PF07948.11 NODE_82310_length_193_cov_1.259494_g74369_i0reverse_frame_3 - 0.0017 16.7 0.4 0.0019 16.5 0.4 1.0 1 0 0 1 1 1 1 Nairovirus M polyprotein-like DUF4788 PF16032.5 NODE_82310_length_193_cov_1.259494_g74369_i0reverse_frame_3 - 0.046 12.7 0.9 0.051 12.5 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4788) RPAP2_Rtr1 PF04181.13 NODE_82309_length_193_cov_1.259494_g74368_i0reverse_frame_2 - 1 9.7 5.5 5.2 7.5 5.5 2.2 1 1 0 1 1 1 0 Rtr1/RPAP2 family DUF5041 PF16444.5 NODE_82301_length_193_cov_1.265823_g74360_i0forward_frame_3 - 0.14 12.4 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5041) RNA_pol_Rpb4 PF03874.16 NODE_82301_length_193_cov_1.265823_g74360_i0forward_frame_2 - 0.081 13.3 0.0 0.083 13.2 0.0 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb4 DUF5531 PF17671.1 NODE_82295_length_193_cov_1.272152_g74354_i0reverse_frame_2 - 2 8.3 6.4 2.4 8.0 6.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5531) DUF2818 PF10993.8 NODE_82290_length_193_cov_1.316456_g74349_i0reverse_frame_3 - 0.064 13.8 0.3 0.068 13.7 0.3 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2818) PhaG_MnhG_YufB PF03334.14 NODE_82289_length_193_cov_1.322785_g74348_i0forward_frame_3 - 0.051 13.8 0.0 0.06 13.6 0.0 1.2 1 0 0 1 1 1 0 Na+/H+ antiporter subunit CBP4 PF07960.11 NODE_82287_length_193_cov_1.341772_g74346_i0forward_frame_2 - 0.019 14.8 0.0 0.023 14.5 0.0 1.1 1 0 0 1 1 1 0 CBP4 CAMSAP_CH PF11971.8 NODE_82287_length_193_cov_1.341772_g74346_i0forward_frame_2 - 0.039 13.8 0.0 0.048 13.5 0.0 1.2 1 0 0 1 1 1 0 CAMSAP CH domain zf-UBP PF02148.19 NODE_82286_length_193_cov_1.341772_g74345_i0forward_frame_3 - 0.7 10.3 7.4 15 6.0 7.4 2.0 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein E_raikovi_mat PF06360.11 NODE_82286_length_193_cov_1.341772_g74345_i0forward_frame_3 - 1.2 9.6 7.1 1 9.8 0.8 2.2 2 0 0 2 2 2 0 Euplotes raikovi mating pheromone Ank PF00023.30 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 2.6e-07 30.8 0.1 6.2e-07 29.6 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 2.9e-07 30.9 0.1 2.2e-05 24.9 0.0 1.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 3.3e-07 30.4 0.0 3.7e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 6.1e-07 30.0 0.0 6.5e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 1.9e-05 24.7 0.0 2.8e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeat DENN PF02141.21 NODE_82275_length_193_cov_1.392405_g74334_i0reverse_frame_3 - 0.0087 16.0 0.0 0.0092 15.9 0.0 1.1 1 0 0 1 1 1 1 DENN (AEX-3) domain ASFV_L11L PF05293.11 NODE_82274_length_193_cov_1.398734_g74333_i0forward_frame_2 - 0.04 14.2 0.4 0.061 13.7 0.4 1.4 1 1 0 1 1 1 0 African swine fever virus (ASFV) L11L protein Lamprin PF06403.11 NODE_82273_length_193_cov_1.398734_g74332_i0forward_frame_3 - 0.028 14.4 0.1 0.028 14.4 0.1 1.2 1 0 0 1 1 1 0 Lamprin Tetradecapep PF08187.11 NODE_82273_length_193_cov_1.398734_g74332_i0forward_frame_2 - 0.084 12.9 0.1 0.084 12.9 0.1 1.9 2 0 0 2 2 2 0 Myoactive tetradecapeptides family His_Phos_1 PF00300.22 NODE_82271_length_193_cov_1.405063_g74330_i0reverse_frame_3 - 0.0015 18.2 0.0 0.0016 18.2 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Ribosomal_S27 PF01599.19 NODE_82265_length_193_cov_1.436709_g74324_i0forward_frame_3 - 0.14 12.3 2.6 0.25 11.5 2.6 1.4 1 0 0 1 1 1 0 Ribosomal protein S27a ESR1_C PF12743.7 NODE_82264_length_193_cov_1.443038_g74323_i0reverse_frame_3 - 0.067 13.0 0.1 0.097 12.5 0.1 1.2 1 0 0 1 1 1 0 Oestrogen-type nuclear receptor final C-terminal TB2_DP1_HVA22 PF03134.19 NODE_82256_length_193_cov_1.493671_g74315_i0reverse_frame_2 - 0.044 13.7 2.7 0.053 13.5 2.7 1.1 1 0 0 1 1 1 0 TB2/DP1, HVA22 family LIM PF00412.22 NODE_82252_length_193_cov_1.500000_g74311_i0forward_frame_3 - 0.0055 16.9 1.3 0.0066 16.7 1.3 1.2 1 0 0 1 1 1 1 LIM domain Toxin_14 PF07829.11 NODE_82251_length_193_cov_1.506329_g74310_i0reverse_frame_2 - 1.6 8.7 7.0 0.47 10.4 3.9 1.9 2 0 0 2 2 2 0 Alpha-A conotoxin PIVA-like protein DUF4644 PF15486.6 NODE_82250_length_193_cov_1.506329_g74309_i0reverse_frame_3 - 0.024 14.4 0.3 0.025 14.3 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4644) ProQ_C PF17516.2 NODE_82242_length_193_cov_1.512658_g74301_i0reverse_frame_3 - 0.24 10.9 0.0 0.3 10.5 0.0 1.1 1 0 0 1 1 1 0 ProQ C-terminal domain DUF677 PF05055.12 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_3 - 0.97 8.3 3.4 0.9 8.4 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF677) Secretin_N_2 PF07655.13 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_2 - 0.019 15.5 6.0 0.022 15.3 6.0 1.1 1 0 0 1 1 1 0 Secretin N-terminal domain SR-25 PF10500.9 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_2 - 1.4 8.4 7.5 1.3 8.5 7.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Herpes_capsid PF06112.11 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_2 - 2 8.5 8.1 2.4 8.2 8.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF2703 PF10865.8 NODE_82235_length_193_cov_1.518987_g74294_i0reverse_frame_3 - 0.071 13.3 0.0 0.081 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) V-SNARE_C PF12352.8 NODE_82231_length_193_cov_1.518987_g74290_i0reverse_frame_2 - 0.042 14.1 0.1 0.055 13.8 0.1 1.2 1 0 0 1 1 1 0 Snare region anchored in the vesicle membrane C-terminus RcsF PF16358.5 NODE_82230_length_193_cov_1.518987_g74289_i0reverse_frame_2 - 0.0026 17.8 0.0 0.0032 17.5 0.0 1.0 1 0 0 1 1 1 1 RcsF lipoprotein DUF995 PF06191.12 NODE_82229_length_193_cov_1.518987_g74288_i0forward_frame_3 - 0.069 12.8 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF995) Glyco_transf_88 PF16849.5 NODE_82228_length_193_cov_1.518987_g74287_i0forward_frame_2 - 0.016 14.2 0.2 0.017 14.1 0.2 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 88 Cytochrom_C PF00034.21 NODE_82221_length_193_cov_1.518987_g74280_i0forward_frame_3 - 0.1 13.7 0.5 0.11 13.7 0.5 1.1 1 0 0 1 1 1 0 Cytochrome c UPF0560 PF10577.9 NODE_82220_length_193_cov_1.518987_g74279_i0forward_frame_3 - 0.2 10.1 0.0 0.2 10.1 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 HTH_OrfB_IS605 PF12323.8 NODE_82217_length_193_cov_1.531646_g74276_i0reverse_frame_3 - 0.24 10.9 1.1 0.39 10.2 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain Cys_Met_Meta_PP PF01053.20 NODE_82216_length_193_cov_1.537975_g74275_i0reverse_frame_3 - 0.036 12.6 0.0 0.041 12.4 0.0 1.0 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme ACT_7 PF13840.6 NODE_82215_length_193_cov_1.550633_g74274_i0forward_frame_2 - 0.079 12.8 0.0 0.097 12.5 0.0 1.2 1 0 0 1 1 1 0 ACT domain DUF2256 PF10013.9 NODE_82214_length_193_cov_1.556962_g74273_i0forward_frame_3 - 0.14 12.3 1.6 0.14 12.3 1.6 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) PerC PF06069.11 NODE_82212_length_193_cov_1.563291_g74271_i0forward_frame_3 - 0.16 12.3 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 PerC transcriptional activator TTL PF03133.15 NODE_82210_length_193_cov_1.588608_g74269_i0forward_frame_3 - 8.8e-11 41.5 0.1 9.1e-11 41.4 0.1 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family TSC22 PF01166.18 NODE_82207_length_193_cov_1.613924_g74266_i0forward_frame_2 - 0.028 14.7 0.0 0.04 14.2 0.0 1.2 1 0 0 1 1 1 0 TSC-22/dip/bun family bZIP_1 PF00170.21 NODE_82207_length_193_cov_1.613924_g74266_i0forward_frame_2 - 0.11 12.6 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 bZIP transcription factor DUF463 PF04317.12 NODE_82206_length_193_cov_1.613924_g74265_i0forward_frame_3 - 0.12 11.3 0.0 0.13 11.2 0.0 1.0 1 0 0 1 1 1 0 YcjX-like family, DUF463 EF-hand_13 PF17958.1 NODE_82202_length_193_cov_1.620253_g74261_i0forward_frame_2 - 0.09 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain Sld3_N PF18523.1 NODE_82199_length_193_cov_1.645570_g74258_i0forward_frame_2 - 0.032 14.3 0.1 0.039 14.1 0.1 1.0 1 0 0 1 1 1 0 Sld3 N-terminal domain Zincin_2 PF10103.9 NODE_82198_length_193_cov_1.645570_g74257_i0reverse_frame_3 - 0.15 11.3 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Zincin-like metallopeptidase PBP1_TM PF14812.6 NODE_82195_length_193_cov_1.677215_g74254_i0reverse_frame_3 - 0.1 13.0 0.9 0.13 12.7 0.9 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF2294 PF10057.9 NODE_82194_length_193_cov_1.683544_g74253_i0forward_frame_2 - 0.053 13.7 0.0 0.062 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2294) Gsf2 PF11055.8 NODE_82192_length_193_cov_1.696203_g74251_i0forward_frame_2 - 0.023 13.5 0.1 0.023 13.5 0.1 1.0 1 0 0 1 1 1 0 Glucose signalling factor 2 AC_N PF16214.5 NODE_82190_length_193_cov_1.721519_g74249_i0reverse_frame_2 - 0.62 9.1 3.0 0.62 9.1 3.0 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Myb_DNA-bind_6 PF13921.6 NODE_82185_length_193_cov_1.746835_g74244_i0reverse_frame_3 - 0.019 15.2 0.1 0.022 15.0 0.1 1.1 1 0 0 1 1 1 0 Myb-like DNA-binding domain GTP1_OBG PF01018.22 NODE_82179_length_193_cov_1.772152_g74238_i0reverse_frame_3 - 1.6e-15 57.0 0.4 1.7e-15 56.9 0.4 1.0 1 0 0 1 1 1 1 GTP1/OBG Ribosomal_L11 PF00298.19 NODE_82178_length_193_cov_1.772152_g74237_i0reverse_frame_2 - 0.078 13.5 0.0 0.09 13.3 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain ZapB PF06005.12 NODE_82177_length_193_cov_1.772152_g74236_i0forward_frame_3 - 0.048 14.1 3.6 0.08 13.4 3.6 1.4 1 1 0 1 1 1 0 Cell division protein ZapB TSC22 PF01166.18 NODE_82177_length_193_cov_1.772152_g74236_i0forward_frame_3 - 0.1 12.9 1.5 0.21 11.9 0.8 1.9 1 1 1 2 2 2 0 TSC-22/dip/bun family Tmp39 PF10271.9 NODE_82172_length_193_cov_1.791139_g74231_i0reverse_frame_3 - 0.035 13.1 0.1 0.039 13.0 0.1 1.0 1 0 0 1 1 1 0 Putative transmembrane protein Col_cuticle_N PF01484.17 NODE_82172_length_193_cov_1.791139_g74231_i0reverse_frame_3 - 0.67 10.1 3.4 1.3 9.1 3.4 1.4 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain DUF4217 PF13959.6 NODE_82170_length_193_cov_1.848101_g74229_i0reverse_frame_3 - 0.067 13.4 0.1 0.082 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4217) HTH_Tnp_Tc5 PF03221.16 NODE_82164_length_193_cov_1.898734_g74223_i0reverse_frame_3 - 0.16 12.0 1.0 0.27 11.3 1.0 1.4 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain TMEMspv1-c74-12 PF11044.8 NODE_82160_length_193_cov_1.943038_g74219_i0reverse_frame_3 - 5.8 7.0 9.8 2.4e+02 1.8 9.5 3.0 1 1 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein TMEMspv1-c74-12 PF11044.8 NODE_82160_length_193_cov_1.943038_g74219_i0reverse_frame_2 - 3 7.9 5.0 21 5.2 0.7 2.4 1 1 1 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF3270 PF11674.8 NODE_82160_length_193_cov_1.943038_g74219_i0reverse_frame_2 - 4 7.7 7.6 2.2 8.5 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3270) DUF717 PF05338.12 NODE_82158_length_193_cov_1.968354_g74217_i0reverse_frame_3 - 0.029 14.5 0.0 0.039 14.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF717) NLBH PF05211.12 NODE_82155_length_193_cov_1.993671_g74214_i0forward_frame_2 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Neuraminyllactose-binding hemagglutinin precursor (NLBH) DnaJ PF00226.31 NODE_82153_length_193_cov_2.006329_g74212_i0forward_frame_2 - 1.3e-05 25.2 0.0 1.4e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 DnaJ domain VirArc_Nuclease PF12187.8 NODE_82152_length_193_cov_2.006329_g74211_i0reverse_frame_3 - 0.099 12.2 0.0 0.099 12.2 0.0 1.1 1 0 0 1 1 1 0 Viral/Archaeal nuclease Tail_spike_N PF18668.1 NODE_82147_length_193_cov_2.018987_g74206_i0reverse_frame_2 - 0.082 12.8 1.4 0.1 12.4 0.2 1.8 2 1 0 2 2 2 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain Macoilin PF09726.9 NODE_82145_length_193_cov_2.018987_g74204_i0reverse_frame_2 - 0.21 10.1 1.7 0.22 10.1 1.7 1.1 1 0 0 1 1 1 0 Macoilin family Adeno_E3B PF03376.14 NODE_82143_length_193_cov_2.025316_g74202_i0reverse_frame_2 - 0.0074 16.5 0.2 0.0083 16.3 0.2 1.2 1 0 0 1 1 1 1 Adenovirus E3B protein Sre PF03125.18 NODE_82134_length_193_cov_2.094937_g74193_i0reverse_frame_3 - 0.0053 16.0 1.7 0.0057 15.8 1.7 1.0 1 0 0 1 1 1 1 C. elegans Sre G protein-coupled chemoreceptor DUF769 PF05590.11 NODE_82134_length_193_cov_2.094937_g74193_i0forward_frame_3 - 0.0035 16.8 0.0 0.0038 16.7 0.0 1.0 1 0 0 1 1 1 1 Xylella fastidiosa protein of unknown function (DUF769) RRXRR PF14239.6 NODE_82131_length_193_cov_2.113924_g74190_i0forward_frame_3 - 0.04 13.8 2.2 0.039 13.8 2.2 1.1 1 0 0 1 1 1 0 RRXRR protein Peripla_BP_2 PF01497.18 NODE_82127_length_193_cov_2.189873_g74186_i0forward_frame_2 - 0.017 14.7 0.0 0.018 14.6 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding protein Fer4_19 PF06902.11 NODE_82122_length_193_cov_2.265823_g74181_i0reverse_frame_3 - 0.16 12.1 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Pox_E6 PF04656.12 NODE_82117_length_193_cov_2.341772_g74176_i0reverse_frame_3 - 0.15 10.5 0.0 0.17 10.3 0.0 1.0 1 0 0 1 1 1 0 Pox virus E6 protein PapD_N PF00345.20 NODE_82115_length_193_cov_2.348101_g74174_i0reverse_frame_2 - 1.1e-19 70.5 0.1 1.2e-19 70.4 0.1 1.0 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain DUF5357 PF17310.2 NODE_82115_length_193_cov_2.348101_g74174_i0forward_frame_2 - 0.048 12.2 0.2 0.052 12.1 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) Cauli_AT PF03233.13 NODE_82112_length_193_cov_2.373418_g74171_i0forward_frame_3 - 0.043 13.7 2.2 0.048 13.6 2.2 1.0 1 0 0 1 1 1 0 Aphid transmission protein Cut12 PF11500.8 NODE_82112_length_193_cov_2.373418_g74171_i0forward_frame_3 - 0.14 12.1 2.1 0.22 11.5 2.1 1.4 1 1 0 1 1 1 0 Spindle pole body formation-associated protein LRV_FeS PF05484.11 NODE_82109_length_193_cov_2.386076_g74168_i0forward_frame_2 - 0.053 13.5 0.9 0.066 13.2 0.9 1.3 1 1 0 1 1 1 0 LRV protein FeS4 cluster ABC_membrane PF00664.23 NODE_82105_length_193_cov_2.474684_g74164_i0forward_frame_2 - 7.5e-06 25.8 0.0 7.5e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF5045 PF16464.5 NODE_82100_length_193_cov_2.518987_g74159_i0forward_frame_3 - 0.09 13.1 0.9 0.11 12.8 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5045) FSAP_sig_propep PF03032.15 NODE_82098_length_193_cov_2.525316_g74157_i0forward_frame_3 - 0.26 11.3 4.5 0.37 10.8 4.5 1.3 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide HATPase_c PF02518.26 NODE_82092_length_193_cov_2.664557_g74151_i0forward_frame_3 - 1.4e-06 28.8 0.0 1.6e-06 28.6 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4381 PF14316.6 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.0026 18.0 0.6 0.0029 17.8 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4381) BatD PF13584.6 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.0071 15.2 0.1 0.0075 15.1 0.1 1.0 1 0 0 1 1 1 1 Oxygen tolerance SRTM1 PF15872.5 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.01 16.0 0.2 0.012 15.8 0.2 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 PAP2_3 PF14378.6 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.022 14.5 0.3 0.022 14.5 0.3 1.0 1 0 0 1 1 1 0 PAP2 superfamily DUF4131 PF13567.6 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.04 13.6 1.9 0.05 13.3 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) CcmD PF04995.14 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.86 9.7 10.1 1.2 9.3 10.1 1.2 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Mucin PF01456.17 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_2 - 0.0095 15.9 19.0 0.01 15.8 19.0 1.1 1 0 0 1 1 1 1 Mucin-like glycoprotein FSA_C PF10479.9 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_2 - 2.4 6.2 6.7 2.2 6.3 6.7 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus GPAT_N PF14829.6 NODE_82088_length_193_cov_2.689873_g74147_i0reverse_frame_2 - 0.058 13.4 0.0 0.084 12.9 0.0 1.2 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase N-terminal CysG_dimeriser PF10414.9 NODE_82083_length_193_cov_2.822785_g74142_i0reverse_frame_2 - 0.07 12.9 0.3 0.073 12.8 0.3 1.1 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region Trimer_CC PF08954.11 NODE_82069_length_193_cov_3.253165_g74128_i0reverse_frame_3 - 0.0078 15.7 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 Trimerisation motif NrfD PF03916.14 NODE_82069_length_193_cov_3.253165_g74128_i0forward_frame_3 - 0.19 11.4 0.0 0.2 11.3 0.0 1.0 1 0 0 1 1 1 0 Polysulphide reductase, NrfD DUF3937 PF13073.6 NODE_82060_length_193_cov_4.044304_g74119_i0reverse_frame_2 - 0.095 12.8 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3937) Myosin_head PF00063.21 NODE_82060_length_193_cov_4.044304_g74119_i0forward_frame_2 - 0.099 10.8 0.1 0.11 10.6 0.1 1.0 1 0 0 1 1 1 0 Myosin head (motor domain) SRTM1 PF15872.5 NODE_82059_length_193_cov_4.139241_g74118_i0reverse_frame_2 - 0.071 13.3 0.0 0.08 13.1 0.0 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 Na_H_Exchanger PF00999.21 NODE_82057_length_193_cov_4.411392_g74116_i0forward_frame_2 - 1.2e-06 27.6 0.2 1.3e-06 27.5 0.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF5438 PF17506.2 NODE_82051_length_193_cov_16.278481_g74110_i0forward_frame_2 - 0.013 15.8 0.8 0.015 15.6 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5438) PilO PF04350.13 NODE_82050_length_193_cov_22.569620_g74109_i0reverse_frame_3 - 0.035 14.2 0.1 0.035 14.2 0.1 1.1 1 0 0 1 1 1 0 Pilus assembly protein, PilO ComK PF06338.11 NODE_82050_length_193_cov_22.569620_g74109_i0reverse_frame_2 - 0.0091 15.6 0.3 0.01 15.5 0.3 1.1 1 0 0 1 1 1 1 ComK protein YidD PF01809.18 NODE_82049_length_193_cov_23.518987_g74108_i0reverse_frame_2 - 0.018 14.9 0.1 0.019 14.8 0.1 1.1 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor RE_HindIII PF09518.10 NODE_82047_length_193_cov_25.221519_g74106_i0forward_frame_3 - 0.23 10.7 0.2 0.22 10.7 0.2 1.0 1 0 0 1 1 1 0 HindIII restriction endonuclease Histone_H2A_C PF16211.5 NODE_82046_length_193_cov_25.474684_g74105_i0forward_frame_3 - 0.54 10.0 3.9 0.8 9.5 3.9 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A HBS1_N PF08938.10 NODE_82045_length_193_cov_27.284810_g74104_i0reverse_frame_2 - 0.067 13.5 0.2 0.083 13.2 0.2 1.2 1 0 0 1 1 1 0 HBS1 N-terminus DUF5318 PF17249.2 NODE_82044_length_193_cov_28.037975_g74103_i0reverse_frame_3 - 0.012 15.4 0.0 0.013 15.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5318) UCR_hinge PF02320.16 NODE_82043_length_193_cov_28.683544_g74102_i0forward_frame_3 - 0.016 15.4 0.2 0.021 15.0 0.2 1.1 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein RANK_CRD_2 PF18278.1 NODE_82043_length_193_cov_28.683544_g74102_i0forward_frame_3 - 0.11 12.7 2.3 0.33 11.1 0.3 2.2 2 0 0 2 2 2 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 FUSC_2 PF13515.6 NODE_82042_length_193_cov_28.721519_g74101_i0forward_frame_2 - 0.03 14.5 0.7 0.039 14.1 0.7 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein-like AAA_lid_11 PF18198.1 NODE_82040_length_193_cov_29.101266_g74099_i0reverse_frame_3 - 0.053 13.3 0.5 0.053 13.3 0.5 1.0 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain VID27 PF08553.10 NODE_82040_length_193_cov_29.101266_g74099_i0reverse_frame_3 - 0.16 11.0 0.0 0.17 10.9 0.0 1.0 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain DUF5435 PF17503.2 NODE_82037_length_193_cov_31.436709_g74096_i0reverse_frame_3 - 0.048 13.4 0.1 0.06 13.1 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5435) Tlr3_TMD PF17968.1 NODE_82036_length_193_cov_33.272152_g74095_i0reverse_frame_2 - 0.58 10.4 4.4 0.88 9.8 4.4 1.3 1 0 0 1 1 1 0 Toll-like receptor 3 trans-membrane domain ABC_membrane PF00664.23 NODE_82036_length_193_cov_33.272152_g74095_i0forward_frame_3 - 0.34 10.5 5.8 0.38 10.4 5.8 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region DUF723 PF05265.13 NODE_82031_length_193_cov_35.272152_g74090_i0forward_frame_3 - 0.031 14.2 0.1 0.04 13.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF723) FliG_C PF01706.16 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_2 - 0.0099 16.1 2.0 0.01 16.0 2.0 1.1 1 0 0 1 1 1 1 FliG C-terminal domain PepSY_TM_like_2 PF16357.5 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_2 - 0.39 10.7 2.5 0.43 10.5 2.5 1.0 1 0 0 1 1 1 0 Putative PepSY_TM-like DUF359 PF04019.12 NODE_82027_length_193_cov_36.746835_g74086_i0reverse_frame_3 - 0.081 12.6 3.0 0.098 12.3 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF359) SID-1_RNA_chan PF13965.6 NODE_82027_length_193_cov_36.746835_g74086_i0reverse_frame_3 - 1.3 7.3 4.6 1.3 7.3 4.6 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 SPT6_acidic PF14632.6 NODE_82027_length_193_cov_36.746835_g74086_i0reverse_frame_2 - 0.04 14.5 10.7 0.047 14.3 10.7 1.0 1 0 0 1 1 1 0 Acidic N-terminal SPT6 Memo PF01875.17 NODE_82026_length_193_cov_37.708861_g74085_i0reverse_frame_3 - 0.0017 17.5 0.0 0.0021 17.2 0.0 1.1 1 0 0 1 1 1 1 Memo-like protein MatE PF01554.18 NODE_82024_length_193_cov_40.936709_g74083_i0reverse_frame_3 - 0.022 14.4 0.3 0.022 14.4 0.3 1.0 1 0 0 1 1 1 0 MatE Peptidase_M17 PF00883.21 NODE_82021_length_193_cov_42.930380_g74080_i0reverse_frame_2 - 0.26 10.5 0.0 0.3 10.3 0.0 1.0 1 0 0 1 1 1 0 Cytosol aminopeptidase family, catalytic domain AAA_17 PF13207.6 NODE_82021_length_193_cov_42.930380_g74080_i0forward_frame_3 - 0.028 14.9 0.0 0.031 14.7 0.0 1.0 1 0 0 1 1 1 0 AAA domain Megourin PF17560.2 NODE_82014_length_193_cov_48.740506_g74073_i0forward_frame_2 - 0.03 14.6 0.2 0.04 14.2 0.2 1.1 1 0 0 1 1 1 0 Aphid Megourins zf-CCCH_4 PF18044.1 NODE_82013_length_193_cov_50.227848_g74072_i0forward_frame_2 - 0.25 11.2 5.3 0.24 11.2 2.0 2.3 2 0 0 2 2 2 0 CCCH-type zinc finger zf-CCCH_2 PF14608.6 NODE_82013_length_193_cov_50.227848_g74072_i0forward_frame_2 - 1.2 9.7 8.2 0.22 12.1 2.9 2.4 2 1 0 2 2 2 0 RNA-binding, Nab2-type zinc finger MORN PF02493.20 NODE_82010_length_193_cov_57.537975_g74069_i0reverse_frame_3 - 0.00049 19.8 5.7 0.002 17.9 0.9 2.3 2 0 0 2 2 2 2 MORN repeat DOG1 PF14144.6 NODE_82008_length_193_cov_59.892405_g74067_i0forward_frame_2 - 0.16 12.2 0.1 0.24 11.6 0.1 1.2 1 0 0 1 1 1 0 Seed dormancy control SHIRT PF18655.1 NODE_82006_length_193_cov_63.120253_g74065_i0reverse_frame_3 - 0.12 13.0 0.0 0.14 12.8 0.0 1.1 1 0 0 1 1 1 0 SHIRT domain AOX PF01786.17 NODE_81998_length_193_cov_73.753165_g74057_i0forward_frame_2 - 0.027 14.1 2.1 0.031 13.8 2.1 1.1 1 0 0 1 1 1 0 Alternative oxidase DUF1600 PF07667.11 NODE_81997_length_193_cov_79.841772_g74056_i0forward_frame_2 - 0.12 12.6 5.3 0.13 12.5 5.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) TSGP1 PF07771.11 NODE_81996_length_193_cov_80.177215_g74055_i0forward_frame_3 - 0.22 11.7 2.8 0.25 11.5 2.8 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 AA_permease PF00324.21 NODE_81993_length_193_cov_81.025316_g74052_i0reverse_frame_3 - 0.017 13.7 0.9 0.018 13.7 0.9 1.1 1 0 0 1 1 1 0 Amino acid permease Ras PF00071.22 NODE_81991_length_193_cov_81.272152_g74050_i0reverse_frame_3 - 0.00033 20.3 0.0 0.0004 20.0 0.0 1.1 1 0 0 1 1 1 1 Ras family ABC2_membrane_5 PF13346.6 NODE_81988_length_193_cov_93.240506_g74047_i0forward_frame_2 - 0.0038 16.8 1.5 0.0041 16.7 1.5 1.2 1 1 0 1 1 1 1 ABC-2 family transporter protein PP1 PF07430.11 NODE_81982_length_193_cov_111.063291_g74041_i0forward_frame_2 - 0.015 15.3 0.0 0.017 15.1 0.0 1.1 1 0 0 1 1 1 0 Phloem filament protein PP1 cystatin-like domain DpnI PF06044.12 NODE_81975_length_193_cov_208.924051_g74034_i0reverse_frame_2 - 1.2 8.8 3.6 1.7 8.3 2.8 1.6 1 1 1 2 2 2 0 Dam-replacing family Pkinase PF00069.25 NODE_81971_length_193_cov_261.784810_g74030_i0reverse_frame_2 - 0.0012 18.3 1.6 0.096 12.0 1.6 2.0 1 1 0 1 1 1 1 Protein kinase domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks389.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks389.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks389.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks389.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_C1 PF00112.23 ORF66292 - 1e-75 254.6 2.3 1.6e-75 253.9 2.3 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF66292 - 2e-06 26.9 0.4 0.0053 15.6 0.2 2.3 2 0 0 2 2 2 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF66292 - 5.6e-06 26.7 1.6 9.8e-06 25.9 0.5 2.0 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Ephrin_rec_like PF07699.13 ORF60229 - 0.0016 18.2 14.3 0.0093 15.7 14.3 2.3 1 1 0 1 1 1 1 Putative ephrin-receptor like SDA1 PF05285.12 ORF59669 - 1.1e-46 159.9 21.3 1.6e-25 90.3 0.2 2.0 1 1 1 2 2 2 2 SDA1 Atg14 PF10186.9 ORF59669 - 4.7 6.2 9.8 1.4 7.9 6.7 1.6 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Stap_Strp_toxin PF01123.20 ORF58712 - 9.1 7.2 13.2 0.31 11.9 1.6 3.4 2 1 1 3 3 3 0 Staphylococcal/Streptococcal toxin, OB-fold domain RCC1_2 PF13540.6 ORF52633 - 6.2e-14 51.4 19.6 0.044 13.6 0.0 8.2 7 1 1 8 8 8 6 Regulator of chromosome condensation (RCC1) repeat FtsQ PF03799.15 ORF52633 - 0.00036 21.4 0.5 16 6.4 0.0 4.4 1 1 3 5 5 5 2 Cell division protein FtsQ DUF1150 PF06620.11 ORF52633 - 0.002 18.2 0.7 9.4 6.4 0.0 3.8 4 1 0 4 4 4 2 Protein of unknown function (DUF1150) PBP_like_2 PF12849.7 ORF48987 - 2.7e-24 86.3 0.6 4.3e-24 85.7 0.6 1.3 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_6 PF13343.6 ORF48987 - 0.066 12.6 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein DUF4404 PF14357.6 ORF46546 - 0.04 14.5 0.4 0.14 12.9 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) DUF1569 PF07606.11 ORF46546 - 0.1 12.6 0.1 1.5 8.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1569) CASP_C PF08172.12 ORF4163 - 0.12 11.7 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 CASP C terminal EF-hand_1 PF00036.32 ORF40938 - 1.4e-10 39.9 0.6 5.3e-05 22.5 0.1 2.7 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF40938 - 7.6e-10 39.1 0.0 1.3e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF40938 - 1.8e-09 36.8 1.1 0.0013 18.5 0.2 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF40938 - 5.6e-09 35.1 1.4 0.0028 17.1 0.2 2.5 2 0 0 2 2 2 2 EF hand Vps62 PF06101.11 ORF40938 - 9.7e-08 30.8 0.0 1.2e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 62 EF-hand_8 PF13833.6 ORF40938 - 1.5e-05 24.7 0.1 0.00091 19.0 0.0 2.5 2 0 0 2 2 2 1 EF-hand domain pair Gly-rich_Ago1 PF12764.7 ORF40938 - 0.078 13.8 0.0 0.19 12.5 0.0 1.6 1 0 0 1 1 1 0 Glycine-rich region of argonaut LRR_6 PF13516.6 ORF3664 - 1.1e-20 71.8 5.6 0.00031 20.6 0.1 5.5 5 0 0 5 5 5 5 Leucine Rich repeat LRR_1 PF00560.33 ORF3664 - 1.2e-06 28.3 0.6 2.7 8.9 0.0 5.2 5 0 0 5 5 5 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF3664 - 2.5e-05 24.6 5.5 0.00037 20.8 1.2 4.4 2 2 3 5 5 5 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF3664 - 0.018 14.8 9.5 1.1 9.1 5.4 4.4 3 1 1 4 4 4 0 Leucine rich repeat RRM_1 PF00076.22 ORF3664 - 0.03 14.2 0.0 0.064 13.1 0.0 1.6 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nuc_sug_transp PF04142.15 ORF31168 - 7.7e-36 123.8 12.8 1e-35 123.5 12.8 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter PUNUT PF16913.5 ORF31168 - 1.5e-10 40.8 12.5 3.3e-10 39.7 12.5 1.7 1 1 0 1 1 1 1 Purine nucleobase transmembrane transport EamA PF00892.20 ORF31168 - 0.00034 20.8 6.5 0.00034 20.8 6.5 3.2 2 2 0 2 2 2 1 EamA-like transporter family TPT PF03151.16 ORF31168 - 0.00039 19.9 8.8 0.0013 18.1 1.3 2.5 2 1 1 3 3 3 2 Triose-phosphate Transporter family Glyco_hydro_14 PF01373.17 ORF31168 - 0.15 11.0 0.0 0.21 10.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 14 Kelch_3 PF13415.6 ORF30692 - 5.6e-29 99.8 1.3 6.6e-09 35.8 0.1 5.2 5 0 0 5 5 5 5 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF30692 - 1.2e-25 89.2 2.6 5.3e-08 32.8 0.1 4.3 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF30692 - 2.3e-25 88.0 0.8 1.3e-08 34.8 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_1 PF01344.25 ORF30692 - 9.9e-23 79.5 1.1 5.9e-10 38.6 0.0 4.4 4 0 0 4 4 4 4 Kelch motif Kelch_2 PF07646.15 ORF30692 - 1.8e-19 68.9 2.4 1.4e-07 31.2 0.0 4.4 4 0 0 4 4 4 3 Kelch motif Kelch_5 PF13854.6 ORF30692 - 3.8e-19 68.3 4.2 5.5e-08 32.6 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Mitofilin PF09731.9 ORF30692 - 1.3 7.8 17.3 1.4 7.6 17.3 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein TRAM_LAG1_CLN8 PF03798.16 ORF29504 - 7.2e-24 84.6 22.1 7.2e-24 84.6 22.1 2.0 2 0 0 2 2 2 1 TLC domain DUF2959 PF11172.8 ORF2641 - 0.018 15.2 1.8 0.018 15.2 1.8 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2959) Unstab_antitox PF09720.10 ORF2641 - 0.021 14.9 0.2 11 6.2 0.1 3.0 1 1 1 2 2 2 0 Putative addiction module component DUF4665 PF15679.5 ORF2641 - 0.047 14.3 0.1 0.047 14.3 0.1 4.2 2 1 1 4 4 4 0 Domain of unknown function (DUF4665) LPP PF04728.13 ORF2641 - 0.97 9.9 6.6 11 6.5 0.3 3.7 3 1 0 3 3 3 0 Lipoprotein leucine-zipper SKA1 PF07160.12 ORF2641 - 2.2 8.1 17.7 1.1 9.1 4.1 2.8 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 XhlA PF10779.9 ORF2641 - 2.2 8.6 16.8 0.31 11.3 2.9 3.9 3 1 1 4 4 4 0 Haemolysin XhlA DUF4988 PF16378.5 ORF2641 - 3 7.5 11.3 4.3 7.0 0.1 3.3 3 0 0 3 3 3 0 Domain of unknown function DUF1664 PF07889.12 ORF2641 - 3.4 7.7 18.7 1.5 8.9 1.7 3.8 3 1 1 4 4 4 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF2641 - 4.8 6.4 23.4 1.3 8.3 5.0 3.2 2 1 2 4 4 4 0 Protein of unknown function (DUF3450) DUF4618 PF15397.6 ORF2641 - 7.5 5.9 25.5 0.53 9.7 9.1 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4618) DUF948 PF06103.11 ORF2641 - 8.1 6.8 11.8 3.1 8.1 0.5 4.1 4 1 0 4 4 4 0 Bacterial protein of unknown function (DUF948) Erythro-docking PF09277.11 ORF22566 - 0.11 12.4 1.4 0.3 11.0 1.4 1.7 1 0 0 1 1 1 0 Erythronolide synthase, docking MFS_1 PF07690.16 ORF2243 - 0.037 12.9 0.1 0.055 12.4 0.1 1.2 1 0 0 1 1 1 0 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF14385 - 0.00013 21.0 7.0 0.00013 21.0 7.0 2.0 2 0 0 2 2 2 1 Sugar (and other) transporter V_ATPase_I PF01496.19 ORF13823 - 0.0013 16.8 8.7 0.0013 16.8 8.7 2.8 1 1 1 2 2 2 1 V-type ATPase 116kDa subunit family Sugarporin_N PF11471.8 ORF13823 - 1.2 9.2 6.2 9.9 6.2 0.1 2.6 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension DUF3509 PF12021.8 ORF13823 - 1.5 8.6 7.0 7.7 6.3 0.5 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3509) DUF488 PF04343.13 ORF107931 - 0.0013 19.3 4.9 0.034 14.7 0.3 3.3 2 1 0 2 2 2 1 Protein of unknown function, DUF488 GlnE PF03710.15 ORF107931 - 0.08 12.3 4.3 0.12 11.7 4.3 1.3 1 0 0 1 1 1 0 Glutamate-ammonia ligase adenylyltransferase NAD_binding_1 PF00175.21 ORF103316 - 3.3e-28 98.5 0.0 6.3e-28 97.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF103316 - 1.6e-25 89.3 0.1 3.3e-25 88.3 0.1 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF103316 - 7.3e-05 22.9 0.0 0.021 14.9 0.0 2.3 1 1 0 2 2 2 2 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF103316 - 0.068 13.6 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC zf-C3HC4_3 PF13920.6 ORF103089 - 4.1e-13 49.0 11.7 7e-13 48.2 11.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF103089 - 1.1e-06 28.4 10.7 1.9e-06 27.6 10.7 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF103089 - 6.5e-05 23.2 14.1 0.00013 22.3 14.1 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF103089 - 0.0015 18.5 11.3 0.0027 17.6 11.3 1.4 1 0 0 1 1 1 1 zinc-RING finger domain SHIPPO-rpt PF07004.12 ORF101076 - 4.3e-11 43.2 28.0 0.13 13.3 0.9 7.7 7 0 0 7 7 7 7 Sperm-tail PG-rich repeat 3Beta_HSD PF01073.19 ORF9844 - 3.5e-26 91.8 0.0 4.7e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF9844 - 1.8e-21 76.7 0.0 2.4e-21 76.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF9844 - 8e-12 45.4 0.0 1.2e-11 44.9 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 ORF9844 - 1.9e-08 33.8 0.0 3.3e-08 33.0 0.0 1.5 1 0 0 1 1 1 1 Male sterility protein GDP_Man_Dehyd PF16363.5 ORF9844 - 4.1e-08 33.0 0.0 6.2e-08 32.4 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 ORF9844 - 8.6e-08 31.6 0.0 1.5e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF9844 - 1.3e-06 28.5 0.0 3e-06 27.2 0.0 1.5 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF9844 - 0.0002 21.6 0.0 0.00044 20.5 0.0 1.7 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NmrA PF05368.13 ORF9844 - 0.00052 19.6 0.0 0.0013 18.4 0.0 1.6 1 1 0 1 1 1 1 NmrA-like family TRP_N PF14558.6 ORF9844 - 0.037 14.4 0.0 0.072 13.5 0.0 1.5 1 0 0 1 1 1 0 ML-like domain B56 PF01603.20 ORF96076 - 2e-97 326.8 16.4 2.2e-97 326.7 16.4 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) FPL PF09758.9 ORF96076 - 0.044 13.8 7.9 0.18 11.8 3.3 2.5 2 0 0 2 2 2 0 Uncharacterised conserved protein TRAM_LAG1_CLN8 PF03798.16 ORF95889 - 4.2e-25 88.7 19.8 4.2e-25 88.7 19.8 2.1 2 0 0 2 2 2 1 TLC domain AP3D1 PF06375.11 ORF92993 - 0.007 16.6 8.3 0.013 15.8 8.3 1.3 1 0 0 1 1 1 1 AP-3 complex subunit delta-1 RR_TM4-6 PF06459.12 ORF92993 - 0.87 9.4 7.9 1.2 8.9 7.9 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PIEZO PF15917.5 ORF92993 - 1 8.8 7.9 2.4 7.6 7.8 1.6 2 0 0 2 2 2 0 Piezo U79_P34 PF03064.16 ORF92993 - 2.5 7.4 13.4 3.9 6.8 13.4 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 DUF2959 PF11172.8 ORF88084 - 0.0078 16.4 1.0 0.085 13.0 0.0 2.2 1 1 0 2 2 2 1 Protein of unknown function (DUF2959) FadA PF09403.10 ORF88084 - 0.016 15.7 2.5 0.016 15.7 2.5 2.2 2 0 0 2 2 2 0 Adhesion protein FadA Fib_alpha PF08702.10 ORF88084 - 0.072 13.3 2.9 0.17 12.1 2.6 1.7 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Apolipoprotein PF01442.18 ORF88084 - 0.16 11.9 21.7 7.4 6.4 21.7 2.5 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Exonuc_VII_L PF02601.15 ORF88084 - 0.17 11.4 7.7 0.35 10.4 7.6 1.6 1 1 0 1 1 1 0 Exonuclease VII, large subunit Baculo_PEP_C PF04513.12 ORF88084 - 0.19 11.8 3.4 1.3 9.1 0.2 3.0 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus FUSC PF04632.12 ORF88084 - 0.19 10.2 12.8 0.32 9.5 12.8 1.4 1 0 0 1 1 1 0 Fusaric acid resistance protein family Spc7 PF08317.11 ORF88084 - 0.21 10.4 14.7 0.23 10.3 4.1 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF87 PF01935.17 ORF88084 - 0.3 11.2 2.4 0.53 10.3 2.2 1.4 1 1 0 1 1 1 0 Helicase HerA, central domain FlaC_arch PF05377.11 ORF88084 - 1.2 9.6 5.4 10 6.6 0.9 3.2 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) XhlA PF10779.9 ORF88084 - 3.2 8.0 6.8 3.8 7.8 2.4 3.0 2 2 1 3 3 3 0 Haemolysin XhlA COG2 PF06148.11 ORF88084 - 3.6 7.7 8.4 4.4 7.4 2.2 3.0 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4404 PF14357.6 ORF88084 - 3.9 8.2 13.9 19 6.0 0.8 3.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4404) Laminin_II PF06009.12 ORF88084 - 5.5 7.0 8.0 4.6 7.3 4.4 2.4 1 1 2 3 3 3 0 Laminin Domain II CENP-H PF05837.12 ORF88084 - 7.2 7.1 12.8 0.4 11.1 1.4 3.1 1 1 2 3 3 3 0 Centromere protein H (CENP-H) TMPIT PF07851.13 ORF88084 - 7.6 5.7 6.1 5.3 6.2 4.2 1.6 1 1 1 2 2 2 0 TMPIT-like protein Tropomyosin_1 PF12718.7 ORF88084 - 9.8 6.3 16.1 0.93 9.6 8.1 2.9 1 1 2 3 3 3 0 Tropomyosin like U-box PF04564.15 ORF84221 - 3e-14 52.9 0.0 5.9e-14 52.0 0.0 1.4 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF84221 - 0.004 17.3 0.0 0.0075 16.4 0.0 1.4 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein zf-Nse PF11789.8 ORF84221 - 0.036 13.9 0.0 0.067 13.0 0.0 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 ORF84221 - 0.13 12.3 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 RING-type zinc-finger zf-C4H2 PF10146.9 ORF83318 - 0.0022 18.4 0.9 0.0022 18.4 0.9 2.4 2 1 0 2 2 2 1 Zinc finger-containing protein ERM PF00769.19 ORF83318 - 0.005 16.7 13.5 0.005 16.7 13.5 2.3 2 0 0 2 2 2 1 Ezrin/radixin/moesin family DUF4200 PF13863.6 ORF83318 - 0.0077 16.6 2.8 0.0077 16.6 2.8 3.5 2 2 1 3 3 3 1 Domain of unknown function (DUF4200) Phage_GPO PF05929.11 ORF83318 - 0.014 15.0 13.4 0.12 11.9 6.3 2.1 2 0 0 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase HMMR_C PF15908.5 ORF83318 - 0.14 12.4 12.4 0.41 10.9 0.4 3.1 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor C-terminal FAM76 PF16046.5 ORF83318 - 0.15 11.4 14.0 0.02 14.2 3.6 2.3 2 0 0 2 2 2 0 FAM76 protein DUF641 PF04859.12 ORF83318 - 0.15 12.4 0.3 0.15 12.4 0.3 3.7 3 1 0 3 3 3 0 Plant protein of unknown function (DUF641) ADIP PF11559.8 ORF83318 - 0.15 12.1 23.0 0.1 12.7 3.0 2.5 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding CENP-H PF05837.12 ORF83318 - 0.16 12.4 0.2 0.16 12.4 0.2 3.0 2 1 0 2 2 2 0 Centromere protein H (CENP-H) Cob_adeno_trans PF01923.18 ORF83318 - 0.18 11.9 9.0 0.14 12.3 3.3 2.2 2 0 0 2 2 2 0 Cobalamin adenosyltransferase NPV_P10 PF05531.12 ORF83318 - 0.25 11.9 9.5 9.2 6.8 0.5 3.5 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein FlaC_arch PF05377.11 ORF83318 - 0.26 11.7 8.6 1.1 9.7 0.0 4.5 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) AAA_13 PF13166.6 ORF83318 - 0.34 9.5 16.0 0.59 8.7 15.9 1.4 1 1 0 1 1 1 0 AAA domain UPF0242 PF06785.11 ORF83318 - 0.36 10.9 21.1 0.24 11.5 8.1 3.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Muted PF14942.6 ORF83318 - 0.37 11.1 18.9 0.047 14.0 7.4 2.7 3 0 0 3 3 3 0 Organelle biogenesis, Muted-like protein COG5 PF10392.9 ORF83318 - 0.46 10.7 8.4 0.69 10.1 0.3 2.7 2 1 0 2 2 2 0 Golgi transport complex subunit 5 GAS PF13851.6 ORF83318 - 0.51 9.7 28.5 2.3 7.5 13.9 2.9 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF1664 PF07889.12 ORF83318 - 0.94 9.5 17.3 1.8 8.6 2.4 3.6 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) Filament PF00038.21 ORF83318 - 0.99 8.9 23.0 0.64 9.6 11.6 2.9 2 2 1 3 3 3 0 Intermediate filament protein T3SSipB PF16535.5 ORF83318 - 1.8 9.0 18.9 1.4 9.4 13.0 2.3 2 0 0 2 2 2 0 Type III cell invasion protein SipB DUF16 PF01519.16 ORF83318 - 2 8.9 16.1 8.3 7.0 0.2 3.9 2 2 1 3 3 3 0 Protein of unknown function DUF16 DUF1043 PF06295.12 ORF83318 - 3 7.9 8.0 0.95 9.5 2.4 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1043) Spc7 PF08317.11 ORF83318 - 3.2 6.5 23.7 0.5 9.2 12.8 2.4 2 0 0 2 2 2 0 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF83318 - 3.3 7.9 28.4 0.53 10.5 13.9 3.1 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 DUF3450 PF11932.8 ORF83318 - 3.9 6.7 24.2 2.6 7.3 1.9 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3450) YabA PF06156.13 ORF83318 - 4 8.1 13.0 15 6.3 0.1 3.1 2 1 1 3 3 3 0 Initiation control protein YabA DUF4349 PF14257.6 ORF83318 - 4.2 6.8 13.6 0.88 9.0 0.3 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4349) Baculo_PEP_C PF04513.12 ORF83318 - 4.3 7.4 9.2 2.2 8.3 1.8 3.1 2 2 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus CENP-F_leu_zip PF10473.9 ORF83318 - 5.4 7.0 29.1 1.4 9.0 3.9 3.6 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HMMR_N PF15905.5 ORF83318 - 5.4 6.4 26.5 5.7 6.3 3.0 2.6 2 1 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal TPR_MLP1_2 PF07926.12 ORF83318 - 6.4 6.9 34.8 0.54 10.3 4.4 3.7 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein Fib_alpha PF08702.10 ORF83318 - 8.1 6.6 13.2 3.1 8.0 6.6 2.9 2 2 1 3 3 3 0 Fibrinogen alpha/beta chain family RRM_1 PF00076.22 ORF82974 - 8.4e-12 44.7 0.0 1.4e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF82974 - 1.1e-09 37.9 16.3 1.3e-05 25.0 3.3 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF82974 - 1.3e-07 31.2 17.4 0.00022 20.9 2.6 2.6 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF82974 - 5.3e-05 23.1 12.7 0.0009 19.2 0.3 3.0 3 0 0 3 3 3 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF82974 - 0.0029 17.3 6.8 0.22 11.3 1.3 2.4 2 0 0 2 2 2 2 Zinc knuckle OB_RNB PF08206.11 ORF82974 - 0.0081 15.8 0.1 0.081 12.6 0.1 2.9 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_2 PF13696.6 ORF82974 - 0.026 14.3 11.7 0.34 10.8 2.1 2.3 2 0 0 2 2 2 0 Zinc knuckle NUDIX_4 PF14815.6 ORF82404 - 6.7e-25 87.2 0.1 1.2e-24 86.4 0.1 1.5 1 0 0 1 1 1 1 NUDIX domain HhH-GPD PF00730.25 ORF82404 - 1.3e-23 83.5 0.0 2e-23 82.9 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 ORF82404 - 2.5e-08 33.3 0.0 5.1e-08 32.4 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 ORF82404 - 0.00014 22.0 4.2 0.00026 21.2 4.2 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_8 PF14716.6 ORF82404 - 0.1 13.0 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix domain HHH_5 PF14520.6 ORF82404 - 0.18 12.5 0.0 0.71 10.5 0.0 2.0 2 0 0 2 2 2 0 Helix-hairpin-helix domain NicO PF03824.16 ORF81202 - 0.05 12.9 2.3 0.35 10.2 0.2 2.3 2 0 0 2 2 2 0 High-affinity nickel-transport protein SSPI PF14098.6 ORF81202 - 0.055 13.6 0.0 0.22 11.7 0.0 2.0 2 0 0 2 2 2 0 Small, acid-soluble spore protein I AhpC-TSA PF00578.21 ORF77012 - 0.037 13.9 0.0 0.061 13.3 0.0 1.4 1 0 0 1 1 1 0 AhpC/TSA family RNA_pol_inhib PF16857.5 ORF77012 - 0.18 11.6 0.0 0.35 10.7 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase inhibitor Beta-lactamase PF00144.24 ORF718 - 1.3e-16 60.8 0.0 1.9e-16 60.3 0.0 1.3 1 1 0 1 1 1 1 Beta-lactamase PhyH PF05721.13 ORF68372 - 0.00015 22.1 0.0 0.046 14.0 0.0 2.3 2 0 0 2 2 2 2 Phytanoyl-CoA dioxygenase (PhyH) CENP-F_C_Rb_bdg PF10490.9 ORF68372 - 0.048 13.1 0.0 0.27 10.7 0.0 2.2 2 0 0 2 2 2 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 ADH_zinc_N_2 PF13602.6 ORF6753 - 1.4e-25 90.9 0.0 2.4e-25 90.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 ORF6753 - 8.5e-10 38.7 0.1 1.4e-09 38.0 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF6753 - 9e-06 25.5 0.0 8.1e-05 22.5 0.0 2.2 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain Acyl_transf_1 PF00698.21 ORF67352 - 9.1e-08 32.0 0.1 2.4e-07 30.6 0.1 1.5 1 1 1 2 2 2 1 Acyl transferase domain CcmH PF03918.14 ORF67116 - 3.3e-51 172.4 0.1 7.5e-51 171.2 0.0 1.6 1 1 0 1 1 1 1 Cytochrome C biogenesis protein TPR_2 PF07719.17 ORF67116 - 6.6e-08 32.1 0.1 0.28 11.4 0.0 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF67116 - 4.1e-05 24.1 4.0 0.018 15.8 0.1 3.7 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF67116 - 0.00027 21.4 5.7 0.028 14.9 0.4 4.5 2 2 2 4 4 4 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF67116 - 0.014 15.5 1.9 0.88 9.8 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF67116 - 0.027 14.7 0.0 0.52 10.6 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF67116 - 0.03 14.7 0.2 1.3 9.5 0.2 3.3 4 0 0 4 4 3 0 Tetratricopeptide repeat Fis1_TPR_N PF14852.6 ORF67116 - 0.068 12.9 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 Fis1 N-terminal tetratricopeptide repeat TPR_16 PF13432.6 ORF67116 - 0.077 13.7 0.8 0.077 13.7 0.8 3.4 2 2 1 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF67116 - 0.079 12.8 0.0 46 4.1 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat UPF0014 PF03649.13 ORF67116 - 0.092 12.1 1.2 0.21 10.9 0.3 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0014) Ricin_B_lectin PF00652.22 ORF67072 - 4.3e-09 36.7 0.1 7.8e-09 35.9 0.1 1.3 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain Glyco_transf_7C PF02709.14 ORF67072 - 0.019 14.6 0.4 0.036 13.7 0.4 1.4 1 0 0 1 1 1 0 N-terminal domain of galactosyltransferase RicinB_lectin_2 PF14200.6 ORF67072 - 0.044 14.5 0.0 0.11 13.2 0.0 1.6 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin domain-like FAD_binding_4 PF01565.23 ORF66326 - 2.8e-16 59.5 0.0 5.1e-16 58.7 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain EFG_IV PF03764.18 ORF64606 - 2e-39 134.1 0.0 3.1e-39 133.5 0.0 1.3 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 ORF64606 - 6.6e-33 112.6 0.0 1.1e-32 111.9 0.0 1.4 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 ORF64606 - 7.8e-29 99.6 0.1 2.6e-28 97.9 0.1 2.0 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF64606 - 1.1e-08 35.4 0.0 1.9e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 ORF64606 - 1.4e-06 28.2 0.0 2.7e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain Peptidase_S28 PF05577.12 ORF58360 - 8.6e-62 209.3 3.9 1.3e-61 208.7 3.9 1.3 1 1 0 1 1 1 1 Serine carboxypeptidase S28 EST1 PF10374.9 ORF57125 - 8.9 7.0 11.3 0.1 13.2 2.4 2.1 2 1 0 2 2 2 0 Telomerase activating protein Est1 GST_N_3 PF13417.6 ORF57064 - 2.2e-12 47.2 0.0 4.9e-12 46.1 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF57064 - 4.4e-09 36.5 0.0 1.2e-08 35.1 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF57064 - 2.8e-08 33.7 0.0 0.0076 16.3 0.0 2.4 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF57064 - 2.8e-06 27.4 0.0 0.0017 18.5 0.0 2.5 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF57064 - 0.00032 21.0 0.1 0.001 19.4 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_5 PF16865.5 ORF57064 - 0.00063 20.3 0.0 0.62 10.7 0.0 2.5 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain TRAM_LAG1_CLN8 PF03798.16 ORF53402 - 2.4e-20 73.1 22.7 2.4e-20 73.1 22.7 1.9 2 0 0 2 2 2 1 TLC domain DAHP_synth_1 PF00793.20 ORF51565 - 5.8e-113 376.3 0.0 6.8e-113 376.1 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family TFIIS_M PF07500.14 ORF48186 - 1.5e-17 64.1 1.6 1.5e-17 64.1 1.6 2.9 3 1 0 3 3 3 1 Transcription factor S-II (TFIIS), central domain TFIIS_C PF01096.18 ORF48186 - 3.3e-16 58.8 4.6 5.4e-16 58.2 4.6 1.4 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS) Med26 PF08711.11 ORF48186 - 2.5e-06 27.4 3.5 5.3e-06 26.4 3.5 1.6 1 0 0 1 1 1 1 TFIIS helical bundle-like domain DUF4428 PF14471.6 ORF48186 - 0.0052 16.7 0.3 0.019 14.9 0.3 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) Menin PF05053.13 ORF48186 - 0.031 12.6 8.3 0.047 12.1 8.3 1.2 1 0 0 1 1 1 0 Menin Baculo_LEF5_C PF11792.8 ORF48186 - 0.058 13.1 0.6 0.11 12.1 0.6 1.5 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 C-terminal domain G-gamma PF00631.22 ORF48186 - 0.059 13.4 1.0 0.17 11.9 0.1 2.2 2 0 0 2 2 2 0 GGL domain Lar_restr_allev PF14354.6 ORF48186 - 0.53 10.7 3.5 0.32 11.4 1.2 1.9 2 0 0 2 2 2 0 Restriction alleviation protein Lar SOBP PF15279.6 ORF48186 - 0.78 10.3 7.8 0.96 10.0 7.8 1.3 1 0 0 1 1 1 0 Sine oculis-binding protein zf-DNL PF05180.12 ORF48186 - 1 9.3 4.8 0.69 9.9 2.1 2.0 2 0 0 2 2 2 0 DNL zinc finger WD40 PF00400.32 ORF467 - 4.9e-46 153.8 15.3 1.4e-07 32.0 0.1 7.2 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF467 - 2.6e-15 56.5 3.5 0.0013 19.0 0.1 5.2 2 1 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF467 - 6.2e-05 22.5 0.0 0.19 11.0 0.0 2.9 2 1 0 3 3 3 2 WD40-like domain eIF2A PF08662.11 ORF467 - 8.7e-05 22.5 3.3 0.023 14.6 0.5 3.0 2 1 1 3 3 3 2 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 ORF467 - 0.00012 21.1 0.1 1.2 8.0 0.0 3.6 2 1 2 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Cytochrom_D1 PF02239.16 ORF467 - 0.0017 16.9 0.2 0.68 8.4 0.0 2.8 2 1 0 3 3 3 2 Cytochrome D1 heme domain Frtz PF11768.8 ORF467 - 0.046 12.0 0.0 0.14 10.4 0.0 1.8 2 1 0 2 2 2 0 WD repeat-containing and planar cell polarity effector protein Fritz 3Beta_HSD PF01073.19 ORF46069 - 3.9e-19 68.7 0.0 5.2e-19 68.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF46069 - 4.5e-19 68.9 0.0 1.2e-18 67.5 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF46069 - 2.6e-13 50.3 0.0 3.9e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF46069 - 3.3e-12 46.5 0.0 5e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF46069 - 3e-10 39.7 0.0 1.9e-09 37.1 0.0 2.1 2 1 0 2 2 2 1 Male sterility protein NmrA PF05368.13 ORF46069 - 3.1e-06 26.9 0.1 1.3e-05 24.8 0.0 1.9 2 0 0 2 2 2 1 NmrA-like family Polysacc_synt_2 PF02719.15 ORF46069 - 5.9e-06 25.6 0.0 8.6e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF46069 - 8.6e-05 22.5 0.0 0.00025 21.0 0.0 1.7 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF46069 - 0.0029 17.9 0.0 0.0056 16.9 0.0 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 ORF46069 - 0.047 13.8 0.3 0.15 12.2 0.3 1.9 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus RRM_1 PF00076.22 ORF41989 - 8.4e-12 44.7 0.0 1.4e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF41989 - 1.1e-09 37.9 16.3 1.3e-05 25.0 3.3 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF41989 - 1.3e-07 31.2 17.4 0.00022 20.9 2.6 2.6 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF41989 - 5e-05 23.2 12.7 0.0009 19.2 0.3 3.0 3 0 0 3 3 3 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF41989 - 0.003 17.3 6.8 0.22 11.3 1.3 2.4 2 0 0 2 2 2 2 Zinc knuckle OB_RNB PF08206.11 ORF41989 - 0.0081 15.8 0.1 0.081 12.6 0.1 2.9 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_2 PF13696.6 ORF41989 - 0.026 14.3 11.7 0.34 10.8 2.1 2.3 2 0 0 2 2 2 0 Zinc knuckle RNA_pol_A_bac PF01000.26 ORF41923 - 1.2e-29 102.9 0.0 1.4e-28 99.5 0.0 2.3 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 ORF41923 - 3.4e-20 71.3 0.0 5.1e-20 70.7 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_7 PF12838.7 ORF41923 - 0.041 14.5 3.2 0.11 13.1 3.2 1.7 1 0 0 1 1 1 0 4Fe-4S dicluster domain ETF_QO PF05187.13 ORF41923 - 0.047 13.8 0.3 0.12 12.5 0.3 1.6 1 0 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S MCM_bind PF09739.9 ORF40655 - 1.1e-67 228.9 0.0 1.3e-67 228.6 0.0 1.0 1 0 0 1 1 1 1 Mini-chromosome maintenance replisome factor PGM_PMM_IV PF00408.20 ORF39560 - 2.5e-10 40.4 0.1 5.6e-10 39.2 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGM_PMM_III PF02880.16 ORF39560 - 0.037 14.2 0.3 0.066 13.4 0.3 1.5 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XylR_N PF06505.11 ORF39560 - 0.11 12.2 0.0 0.25 11.1 0.0 1.6 1 0 0 1 1 1 0 Activator of aromatic catabolism PseudoU_synth_2 PF00849.22 ORF34639 - 2.8e-21 76.3 0.0 3.8e-21 75.8 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase Ion_trans PF00520.31 ORF33973 - 7.8e-13 48.2 8.2 1.1e-12 47.7 8.2 1.1 1 0 0 1 1 1 1 Ion transport protein MCPVI PF02993.14 ORF33973 - 0.28 11.0 2.6 0.4 10.5 2.6 1.1 1 0 0 1 1 1 0 Minor capsid protein VI SR-25 PF10500.9 ORF33973 - 0.68 9.5 10.2 0.99 9.0 10.2 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DHHC PF01529.20 ORF33973 - 1.2 9.2 4.5 1.4 9.0 3.7 1.3 1 1 0 1 1 1 0 DHHC palmitoyltransferase TRAM_LAG1_CLN8 PF03798.16 ORF25446 - 2.4e-20 73.1 22.7 2.4e-20 73.1 22.7 1.9 2 0 0 2 2 2 1 TLC domain P_C10 PF14974.6 ORF21868 - 0.021 14.9 0.0 0.035 14.2 0.0 1.4 1 0 0 1 1 1 0 Protein C10 Effector_1 PF04518.12 ORF18559 - 0.08 12.0 0.6 0.11 11.6 0.0 1.5 2 0 0 2 2 2 0 Effector from type III secretion system DNA_pol_phi PF04931.13 ORF18559 - 3.5 5.6 11.5 0.065 11.3 2.0 2.0 2 0 0 2 2 2 0 DNA polymerase phi GIT_CC PF16559.5 ORF1745 - 5.3e-05 23.0 0.6 0.00018 21.3 0.6 1.9 1 0 0 1 1 1 1 GIT coiled-coil Rho guanine nucleotide exchange factor ACP_PD PF04336.12 ORF1745 - 0.00075 19.9 1.4 0.088 13.2 0.0 3.4 3 1 1 4 4 4 1 Acyl carrier protein phosphodiesterase GAS PF13851.6 ORF1745 - 0.0031 16.9 6.7 0.0031 16.9 6.7 2.7 2 1 0 2 2 2 1 Growth-arrest specific micro-tubule binding Spc7 PF08317.11 ORF1745 - 0.045 12.6 22.6 0.21 10.5 6.7 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein Atg14 PF10186.9 ORF1745 - 0.056 12.5 19.0 0.041 13.0 3.8 2.3 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 NPV_P10 PF05531.12 ORF1745 - 0.094 13.2 2.1 1.8 9.1 0.0 3.5 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein Syntaxin-6_N PF09177.11 ORF1745 - 0.11 13.1 10.3 0.35 11.5 0.2 3.4 2 1 1 3 3 3 0 Syntaxin 6, N-terminal PhaP_Bmeg PF09602.10 ORF1745 - 0.17 11.8 0.2 0.17 11.8 0.2 3.4 3 1 0 3 3 3 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) AAA_13 PF13166.6 ORF1745 - 0.38 9.4 15.0 0.91 8.1 2.9 2.1 2 0 0 2 2 2 0 AAA domain DUF3584 PF12128.8 ORF1745 - 0.44 8.0 28.4 0.077 10.5 12.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) BORCS7 PF16088.5 ORF1745 - 0.45 10.8 7.1 0.73 10.1 0.4 3.5 2 1 1 3 3 3 0 BLOC-1-related complex sub-unit 7 Baculo_PEP_C PF04513.12 ORF1745 - 0.63 10.1 4.1 3.7 7.6 0.1 3.2 2 1 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4407 PF14362.6 ORF1745 - 1.3 8.3 33.9 1.8e+04 -9.6 33.8 2.4 1 1 0 1 1 0 0 Domain of unknown function (DUF4407) COG5 PF10392.9 ORF1745 - 2.6 8.2 8.5 1.3 9.2 0.1 3.6 2 1 1 4 4 4 0 Golgi transport complex subunit 5 Lectin_N PF03954.14 ORF1745 - 3.7 7.3 6.3 0.47 10.2 0.9 2.3 2 1 0 2 2 2 0 Hepatic lectin, N-terminal domain WPP PF13943.6 ORF1745 - 4.1 7.9 15.0 7.2 7.1 5.2 2.7 2 0 0 2 2 2 0 WPP domain DUF2203 PF09969.9 ORF1745 - 8.1 7.2 14.9 0.38 11.5 2.0 2.9 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) ATG16 PF08614.11 ORF1745 - 8.7 6.5 34.0 1.7 8.8 16.8 2.3 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) TRAM_LAG1_CLN8 PF03798.16 ORF14196 - 2.4e-20 73.1 22.7 2.4e-20 73.1 22.7 1.9 2 0 0 2 2 2 1 TLC domain Sipho_Gp157 PF05565.11 ORF11402 - 0.0098 15.9 0.3 0.063 13.3 0.0 2.4 2 1 0 2 2 2 1 Siphovirus Gp157 Flavodoxin_1 PF00258.25 ORF11402 - 0.022 15.0 1.6 0.038 14.2 0.2 2.1 2 1 0 2 2 2 0 Flavodoxin Fib_alpha PF08702.10 ORF11402 - 0.026 14.7 8.1 0.074 13.2 0.2 3.6 3 1 1 4 4 4 0 Fibrinogen alpha/beta chain family GCP_N_terminal PF17681.1 ORF11402 - 0.044 13.4 2.5 0.072 12.7 2.5 1.4 1 0 0 1 1 1 0 Gamma tubulin complex component N-terminal zf-C4pol PF14260.6 ORF11402 - 0.08 13.4 0.3 3.8 8.0 0.0 3.2 2 0 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta PDZ_1 PF12812.7 ORF11402 - 0.11 12.5 0.0 0.3 11.2 0.0 1.7 1 0 0 1 1 1 0 PDZ-like domain Matrilin_ccoil PF10393.9 ORF11402 - 0.17 11.8 10.9 1.4 8.8 0.4 4.2 4 1 1 5 5 5 0 Trimeric coiled-coil oligomerisation domain of matrilin CREPT PF16566.5 ORF11402 - 2 8.6 13.4 0.16 12.2 0.7 3.5 1 1 1 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour Exonuc_VII_L PF02601.15 ORF11402 - 3.8 7.0 18.7 8e+03 -3.9 18.7 2.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF16 PF01519.16 ORF11402 - 5.5 7.5 13.1 18 5.9 0.8 4.0 3 1 1 4 4 4 0 Protein of unknown function DUF16 SPRY PF00622.28 ORF111303 - 8.6e-07 29.1 0.2 8.6e-07 29.1 0.2 1.8 2 0 0 2 2 2 1 SPRY domain RRM_1 PF00076.22 ORF111184 - 8.4e-12 44.7 0.0 1.4e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF111184 - 1.1e-09 37.9 16.3 1.3e-05 25.0 3.3 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF111184 - 1.3e-07 31.2 17.4 0.00022 20.9 2.6 2.6 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF111184 - 5e-05 23.2 12.7 0.0009 19.2 0.3 3.0 3 0 0 3 3 3 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF111184 - 0.003 17.3 6.8 0.22 11.3 1.3 2.4 2 0 0 2 2 2 2 Zinc knuckle OB_RNB PF08206.11 ORF111184 - 0.0081 15.8 0.1 0.081 12.6 0.1 2.9 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_2 PF13696.6 ORF111184 - 0.026 14.3 11.7 0.34 10.8 2.1 2.3 2 0 0 2 2 2 0 Zinc knuckle DnaJ PF00226.31 ORF11065 - 1.6e-18 66.5 0.3 9e-18 64.2 0.1 2.2 2 0 0 2 2 2 1 DnaJ domain SAP PF02037.27 ORF11065 - 1.1e-07 31.4 4.8 0.00089 19.0 0.0 4.8 3 2 0 3 3 3 3 SAP domain Armet PF10208.9 ORF11065 - 0.11 12.4 0.1 22 5.0 0.0 2.7 2 1 0 2 2 2 0 Degradation arginine-rich protein for mis-folding TMEM144 PF07857.12 ORF107555 - 2.3e-56 191.2 1.1 1.3e-55 188.7 1.1 1.8 1 1 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Sugar_transport PF06800.12 ORF107555 - 8.5e-06 25.3 1.4 8.5e-06 25.3 1.4 2.1 2 0 0 2 2 2 1 Sugar transport protein DMT_YdcZ PF04657.13 ORF107555 - 0.0014 18.9 5.0 0.0014 18.9 5.0 2.6 2 1 0 2 2 2 1 Putative inner membrane exporter, YdcZ Thi4 PF01946.17 ORF107555 - 0.15 11.3 0.2 0.22 10.7 0.2 1.2 1 0 0 1 1 1 0 Thi4 family LXG PF04740.12 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.00078 19.2 12.0 0.00078 19.2 12.0 2.3 2 0 0 2 2 2 1 LXG domain of WXG superfamily Baculo_PEP_C PF04513.12 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.0074 16.3 0.1 0.019 15.0 0.1 1.6 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus NPV_P10 PF05531.12 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.19 12.2 3.5 1.2 9.7 2.5 2.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Pullulanase_Ins PF18494.1 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.31 11.5 3.7 0.27 11.7 0.4 2.6 3 0 0 3 3 3 0 Pullulanase Ins domain DUF4140 PF13600.6 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.51 10.8 6.0 0.81 10.2 0.1 3.0 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) DUF1664 PF07889.12 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 1 9.4 12.2 2 8.5 4.4 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Nup54 PF13874.6 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 4.4 7.4 9.1 2.6 8.1 6.9 1.7 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 HIP1_clath_bdg PF16515.5 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 5.6 7.6 12.0 3.1 8.5 3.4 2.7 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TMF_TATA_bd PF12325.8 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 9.1 6.5 18.4 0.43 10.8 4.1 3.0 2 1 1 3 3 3 0 TATA element modulatory factor 1 TATA binding SUR7 PF06687.12 NODE_17922_length_1045_cov_1613.268317_g13660_i0reverse_frame_1 - 0.0085 15.7 0.2 0.048 13.3 0.0 2.0 2 0 0 2 2 2 1 SUR7/PalI family PP2C PF00481.21 ORF97266 - 1.7e-68 231.1 1.0 7.9e-64 215.8 0.2 2.1 1 1 1 2 2 2 2 Protein phosphatase 2C PP2C_2 PF13672.6 ORF97266 - 0.0006 19.5 0.0 0.0017 18.0 0.0 1.6 2 1 0 2 2 2 1 Protein phosphatase 2C Kp4 PF09044.10 ORF97266 - 0.49 10.5 2.8 0.91 9.6 0.0 2.6 3 1 1 4 4 4 0 Kp4 Ank_2 PF12796.7 ORF92613 - 9.6e-31 106.2 0.5 1.5e-12 47.9 0.0 4.0 3 1 1 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF92613 - 2.3e-29 101.4 1.1 1.1e-09 38.6 0.0 4.5 5 0 0 5 5 5 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF92613 - 4.1e-23 81.1 4.2 3e-07 30.6 0.0 5.5 2 1 4 6 6 6 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF92613 - 3.5e-22 77.8 6.9 0.00027 21.2 0.0 7.5 7 0 0 7 7 7 5 Ankyrin repeat Ank_3 PF13606.6 ORF92613 - 1.5e-19 68.0 4.3 0.018 15.5 0.0 7.5 7 1 1 8 8 8 5 Ankyrin repeat Pescadillo_N PF06732.11 ORF87331 - 2.8e-10 40.2 0.0 2.8e-10 40.2 0.0 1.6 2 0 0 2 2 2 1 Pescadillo N-terminus BRCT_2 PF16589.5 ORF87331 - 0.00019 21.8 0.0 0.00052 20.4 0.0 1.7 2 0 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain RRM_1 PF00076.22 ORF8613 - 4e-17 61.8 0.0 6.6e-17 61.1 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KH_1 PF00013.29 ORF8613 - 3.1e-14 52.5 0.0 1.1e-11 44.4 0.0 2.8 3 0 0 3 3 3 2 KH domain RRM_7 PF16367.5 ORF8613 - 0.018 15.2 0.0 0.09 12.9 0.0 2.0 2 0 0 2 2 2 0 RNA recognition motif KH_2 PF07650.17 ORF8613 - 0.021 14.6 0.0 0.041 13.7 0.0 1.4 1 0 0 1 1 1 0 KH domain Nup35_RRM_2 PF14605.6 ORF8613 - 0.18 11.9 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif 3Beta_HSD PF01073.19 ORF85485 - 1.2e-28 100.0 0.0 1.5e-28 99.6 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF85485 - 4.7e-23 81.9 0.0 6e-23 81.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF85485 - 3.9e-12 46.4 0.0 5.8e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF85485 - 4e-11 42.9 0.0 5.9e-11 42.3 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF85485 - 4.6e-09 35.8 0.0 1.2e-08 34.5 0.0 1.6 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF85485 - 2.1e-08 33.7 0.0 3.1e-08 33.1 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF85485 - 9e-07 29.0 0.0 2.2e-06 27.7 0.0 1.5 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF85485 - 0.00047 20.4 0.0 0.0014 18.9 0.0 1.8 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain NmrA PF05368.13 ORF85485 - 0.0045 16.6 0.0 0.0068 16.0 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family RNA_pol_3_Rpc31 PF11705.8 ORF84293 - 0.0095 16.2 10.2 0.0095 16.2 10.2 1.9 3 0 0 3 3 1 1 DNA-directed RNA polymerase III subunit Rpc31 BUD22 PF09073.10 ORF84293 - 0.027 13.8 15.5 0.013 14.8 13.3 1.6 2 0 0 2 2 2 0 BUD22 DUF4746 PF15928.5 ORF84293 - 0.22 10.9 10.3 0.32 10.4 10.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Myc_N PF01056.18 ORF84293 - 0.29 11.0 11.5 0.46 10.3 11.5 1.2 1 0 0 1 1 1 0 Myc amino-terminal region CobT PF06213.12 ORF84293 - 0.89 8.9 18.9 1.9 7.8 18.9 1.6 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Mpp10 PF04006.12 ORF84293 - 1.4 7.2 23.7 2.8 6.3 23.8 1.4 1 1 0 1 1 1 0 Mpp10 protein Paf1 PF03985.13 ORF84293 - 1.9 7.4 20.9 2.8 6.8 20.9 1.3 1 0 0 1 1 1 0 Paf1 D123 PF07065.14 ORF84293 - 2.9 7.0 6.5 7.4 5.6 5.5 2.0 2 0 0 2 2 2 0 D123 Nop14 PF04147.12 ORF84293 - 3 5.9 20.7 4.1 5.5 20.7 1.2 1 0 0 1 1 1 0 Nop14-like family TRAP_alpha PF03896.16 ORF84293 - 3.6 6.7 8.9 6.6 5.8 8.9 1.4 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Connexin PF00029.19 ORF84293 - 3.6 7.3 4.1 6.4 6.5 4.1 1.3 1 0 0 1 1 1 0 Connexin Raftlin PF15250.6 ORF84293 - 3.7 6.2 9.1 5.2 5.7 9.1 1.2 1 0 0 1 1 1 0 Raftlin RR_TM4-6 PF06459.12 ORF84293 - 3.8 7.3 13.3 6.4 6.5 13.3 1.4 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF4820 PF16091.5 ORF84293 - 5 6.4 6.7 8.8 5.6 6.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Presenilin PF01080.17 ORF84293 - 7.1 5.3 10.1 9.1 4.9 10.1 1.2 1 0 0 1 1 1 0 Presenilin Tim54 PF11711.8 ORF84293 - 8.2 5.1 9.9 14 4.3 9.9 1.3 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 ADH_N PF08240.12 ORF77606 - 2.5e-27 94.9 5.6 4.5e-27 94.1 5.6 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF77606 - 3.2e-26 91.9 0.1 5.3e-26 91.1 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF77606 - 4.8e-07 30.9 0.0 1.1e-06 29.8 0.0 1.6 2 0 0 2 2 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 ORF77606 - 6.9e-07 28.8 0.2 1.2e-06 28.0 0.2 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 ORF77606 - 1.2e-05 24.8 0.0 2e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF77606 - 0.00056 20.1 0.1 0.001 19.3 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Oxidored_nitro PF00148.19 ORF77606 - 0.0016 17.2 0.0 0.0023 16.7 0.0 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Glu_dehyd_C PF16912.5 ORF77606 - 0.013 15.0 0.0 0.02 14.4 0.0 1.3 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus Shikimate_DH PF01488.20 ORF77606 - 0.015 15.3 0.0 0.03 14.4 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF77606 - 0.058 13.7 0.2 0.18 12.1 0.1 1.8 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain Methyltransf_11 PF08241.12 ORF77606 - 0.062 14.0 0.1 0.12 13.0 0.1 1.5 1 0 0 1 1 1 0 Methyltransferase domain 3HCDH_N PF02737.18 ORF77606 - 0.16 11.8 0.3 0.25 11.2 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Calpain_III PF01067.22 ORF70656 - 6.1e-18 65.4 1.6 2.3e-08 34.4 0.1 3.6 3 1 0 3 3 3 3 Calpain large subunit, domain III Glyco_transf_90 PF05686.12 ORF63513 - 7.7e-06 25.1 1.8 7.8e-05 21.8 1.8 2.3 1 1 0 1 1 1 1 Glycosyl transferase family 90 NMD3 PF04981.13 ORF60929 - 2.3e-15 56.7 0.1 3.5e-15 56.1 0.1 1.3 1 0 0 1 1 1 1 NMD3 family DNA_ligase_A_C PF04679.15 ORF58213 - 8.8e-15 55.1 0.0 1.7e-14 54.2 0.0 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region BRCT_2 PF16589.5 ORF58213 - 7.3e-05 23.1 0.0 0.00013 22.3 0.0 1.5 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain DNA_ligase_A_M PF01068.21 ORF58213 - 0.0034 17.1 0.2 0.0053 16.4 0.2 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain Methyltransf_21 PF05050.12 ORF54633 - 5e-10 39.7 0.0 1.5e-09 38.1 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase FkbM domain PCMT PF01135.19 ORF54633 - 0.0015 18.3 0.0 0.0025 17.6 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) V_cholerae_RfbT PF05575.11 ORF54633 - 0.0055 16.0 0.0 0.045 13.0 0.0 2.0 2 0 0 2 2 2 1 Vibrio cholerae RfbT protein Met_10 PF02475.16 ORF54633 - 0.12 12.1 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein PABP PF00658.18 ORF52859 - 9.5e-09 35.3 0.0 1.5e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain TFIIA PF03153.13 ORF52859 - 2.6 8.0 13.3 3.1 7.7 13.3 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit zf-RanBP PF00641.18 ORF52233 - 2.3e-09 36.4 3.6 4.1e-09 35.6 3.6 1.3 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others DZR PF12773.7 ORF52233 - 0.00021 21.2 0.8 0.00042 20.3 0.8 1.4 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 ORF52233 - 0.002 17.8 7.4 0.0036 16.9 7.4 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF52233 - 0.0061 15.9 6.8 0.011 15.1 6.8 1.4 1 0 0 1 1 1 1 zinc-ribbon domain Nudix_N_2 PF14803.6 ORF52233 - 1.3 9.1 7.9 7.8 6.5 1.3 2.9 1 1 2 3 3 3 0 Nudix N-terminal zinc_ribbon_15 PF17032.5 ORF52233 - 1.4 9.7 5.6 3 8.7 5.6 1.8 1 1 0 1 1 1 0 zinc-ribbon family Rubredoxin_2 PF18073.1 ORF52233 - 2.3 8.0 5.1 16 5.4 0.9 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Vps36-NZF-N PF16988.5 ORF52233 - 8.9 5.8 8.2 1.9 8.0 2.9 2.6 2 1 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain FMO-like PF00743.19 ORF50015 - 1.5e-24 86.4 0.0 8.5e-24 83.9 0.0 1.8 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF50015 - 4e-08 32.9 0.0 1e-06 28.2 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF50015 - 4.8e-07 29.3 0.0 0.0031 16.8 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF50015 - 7.4e-05 22.0 0.2 0.00014 21.1 0.0 1.4 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 ORF50015 - 0.0032 18.0 0.2 0.0086 16.6 0.1 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 ORF50015 - 0.0046 16.4 0.2 0.0072 15.7 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF50015 - 0.021 13.9 0.0 0.12 11.5 0.0 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A NAD_binding_7 PF13241.6 ORF50015 - 0.023 15.1 0.0 0.04 14.4 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding Nucleoside_tran PF01733.18 ORF45478 - 8.6e-55 186.3 16.6 1.1e-54 186.0 16.6 1.0 1 0 0 1 1 1 1 Nucleoside transporter DUF2976 PF11190.8 ORF45478 - 0.18 11.6 2.2 1.4 8.8 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2976) EMC3_TMCO1 PF01956.16 ORF45478 - 0.44 10.3 12.4 0.53 10.0 2.0 2.4 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Wzz PF02706.15 ORF45478 - 0.56 10.6 2.6 1.9 8.9 0.3 2.7 2 0 0 2 2 2 0 Chain length determinant protein DUF551 PF04448.12 ORF43656 - 0.041 14.8 0.2 0.093 13.7 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF551) MRP-L28 PF09812.9 ORF43656 - 1.1 9.3 3.3 0.58 10.3 1.0 1.6 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L28 PHR PF08005.12 ORF36126 - 6.6e-20 72.3 2.4 1.5e-19 71.1 0.3 2.0 2 0 0 2 2 2 1 PHR domain HEAT_2 PF13646.6 ORF31915 - 2.8e-60 200.7 59.9 1.4e-11 44.6 0.9 5.6 1 1 7 8 8 8 8 HEAT repeats HEAT PF02985.22 ORF31915 - 4.1e-29 98.1 22.8 8.9e-06 25.5 0.0 10.1 10 0 0 10 10 10 5 HEAT repeat HEAT_EZ PF13513.6 ORF31915 - 1e-16 61.1 30.0 0.0011 19.4 0.1 8.5 6 2 3 10 10 10 5 HEAT-like repeat Adaptin_N PF01602.20 ORF31915 - 4.9e-15 55.1 0.0 2.6e-06 26.3 0.1 3.8 1 1 3 4 4 4 4 Adaptin N terminal region Cnd1 PF12717.7 ORF31915 - 1.7e-13 50.9 0.1 0.019 15.0 0.1 4.9 2 2 3 5 5 5 4 non-SMC mitotic condensation complex subunit 1 RTP1_C1 PF10363.9 ORF31915 - 5.5e-12 45.8 0.0 8.4e-05 22.7 0.0 5.9 2 2 1 3 3 3 1 Required for nuclear transport of RNA pol II C-terminus 1 HEAT_PBS PF03130.16 ORF31915 - 2.2e-09 37.1 27.1 0.31 11.8 0.7 9.2 9 0 0 9 9 9 2 PBS lyase HEAT-like repeat Arm PF00514.23 ORF31915 - 5.5e-08 32.6 20.3 0.015 15.4 0.1 6.6 8 1 1 9 9 8 3 Armadillo/beta-catenin-like repeat Vac14_Fab1_bd PF12755.7 ORF31915 - 1.1e-07 32.4 0.0 3.6 8.2 0.0 5.2 2 2 4 6 6 6 2 Vacuolar 14 Fab1-binding region IFRD PF05004.13 ORF31915 - 2.7e-05 23.4 4.9 0.00045 19.4 1.4 3.6 2 2 0 2 2 2 1 Interferon-related developmental regulator (IFRD) RasGEF_N_2 PF14663.6 ORF31915 - 0.00025 21.4 1.0 5 7.6 0.0 5.1 2 2 5 7 7 6 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain Vitellogenin_N PF01347.22 ORF31915 - 0.00063 18.3 0.0 0.86 7.9 0.0 3.1 2 2 2 4 4 4 2 Lipoprotein amino terminal region Proteasom_PSMB PF10508.9 ORF31915 - 0.0012 17.4 0.5 2.1 6.8 0.1 3.2 1 1 1 3 3 3 1 Proteasome non-ATPase 26S subunit CLASP_N PF12348.8 ORF31915 - 0.0028 17.2 0.5 1.7 8.2 0.0 4.2 2 2 2 5 5 5 1 CLASP N terminal DNA_alkylation PF08713.11 ORF31915 - 0.0029 17.4 0.0 3.8 7.1 0.0 3.4 1 1 2 4 4 4 1 DNA alkylation repair enzyme Tti2 PF10521.9 ORF31915 - 0.0078 15.8 0.0 1.7 8.2 0.0 3.4 3 2 1 4 4 4 1 Tti2 family V-ATPase_H_C PF11698.8 ORF31915 - 0.045 13.9 0.0 4.2 7.5 0.0 3.6 4 0 0 4 4 4 0 V-ATPase subunit H DUF2019 PF09450.10 ORF31915 - 0.052 13.5 0.6 0.22 11.5 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF2019) V-ATPase_H_N PF03224.14 ORF31915 - 0.062 12.6 0.0 1.2 8.3 0.0 2.2 1 1 1 2 2 2 0 V-ATPase subunit H DUF5578 PF17741.1 ORF31915 - 0.081 12.3 0.1 17 4.8 0.1 2.7 2 1 0 2 2 2 0 Family of unknown function (DUF5578) Cohesin_HEAT PF12765.7 ORF31915 - 0.18 12.1 13.7 0.43 10.9 0.1 4.6 6 0 0 6 6 4 0 HEAT repeat associated with sister chromatid cohesion Dopey_N PF04118.14 ORF31915 - 0.25 10.4 0.0 0.56 9.3 0.0 1.5 2 0 0 2 2 2 0 Dopey, N-terminal SIP PF04954.13 ORF31915 - 1.1 9.8 5.9 3.9 8.0 0.0 3.7 3 1 1 4 4 4 0 Siderophore-interacting protein COX15-CtaA PF02628.15 ORF24209 - 6.4e-94 314.7 7.7 7.2e-94 314.5 7.7 1.0 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein FAM184 PF15665.5 ORF24171 - 0.0018 18.1 50.8 0.015 15.1 14.4 3.3 1 1 2 3 3 3 3 Family with sequence similarity 184, A and B DUF1040 PF06288.13 ORF24171 - 0.0023 18.3 1.5 0.0074 16.7 1.5 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) T7SS_ESX_EspC PF10824.8 ORF24171 - 3.9 8.0 19.2 1.1 9.8 14.4 2.5 3 0 0 3 3 3 0 Excreted virulence factor EspC, type VII ESX diderm CstA_5TM PF13722.6 ORF21416 - 3.6e-36 124.1 7.8 3.6e-36 124.1 7.8 2.0 2 0 0 2 2 2 1 5TM C-terminal transporter carbon starvation CstA CstA PF02554.14 ORF21416 - 1.4e-14 53.8 0.6 1.4e-14 53.8 0.6 2.4 3 1 0 3 3 3 1 Carbon starvation protein CstA ZapB PF06005.12 ORF20190 - 0.16 12.4 0.6 0.29 11.6 0.6 1.4 1 0 0 1 1 1 0 Cell division protein ZapB HATPase_c PF02518.26 ORF19534 - 7.4e-18 65.1 0.0 1.5e-17 64.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF19534 - 5.5e-14 51.9 0.7 2.5e-13 49.9 0.1 2.5 2 1 1 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 ORF19534 - 9.3e-08 32.1 0.0 3.1e-07 30.4 0.0 1.8 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 ORF19534 - 7.5e-05 22.9 0.0 0.00016 21.9 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 ORF19534 - 8.8e-05 22.7 0.0 0.00019 21.6 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 ORF19534 - 0.00019 21.4 0.1 0.0011 18.9 0.0 2.2 2 0 0 2 2 2 1 PAS domain DUF1688 PF07958.11 ORF19534 - 0.037 12.8 0.1 0.047 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1688) HATPase_c_3 PF13589.6 ORF19534 - 0.1 12.4 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FMO-like PF00743.19 ORF15723 - 4.1e-25 88.2 0.0 2.3e-24 85.7 0.0 1.8 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF15723 - 3.9e-08 32.9 0.0 1e-06 28.2 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF15723 - 5.7e-07 29.1 0.0 0.0031 16.8 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF15723 - 7.4e-05 22.0 0.2 0.00014 21.1 0.0 1.4 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 ORF15723 - 0.0032 18.0 0.2 0.0086 16.6 0.1 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 ORF15723 - 0.0045 16.4 0.2 0.0072 15.7 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF15723 - 0.021 13.9 0.0 0.12 11.5 0.0 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A NAD_binding_7 PF13241.6 ORF15723 - 0.023 15.1 0.0 0.04 14.4 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding Citrate_synt PF00285.21 ORF14389 - 8e-103 344.3 0.4 9.1e-103 344.1 0.4 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF4607 PF15380.6 ORF14389 - 0.13 11.8 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4607) AA_permease PF00324.21 ORF12799 - 3.8e-90 302.8 28.7 4.6e-90 302.5 28.7 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF12799 - 4.1e-39 134.6 29.3 4.8e-39 134.4 29.3 1.0 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 ORF12799 - 0.00052 18.9 9.9 0.00092 18.1 9.9 1.3 1 1 0 1 1 1 1 Spore germination protein Phasin PF05597.11 ORF103680 - 0.029 14.3 1.2 0.029 14.3 1.2 2.6 2 1 1 3 3 3 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Ribosomal_L9_C PF03948.14 ORF103680 - 0.037 14.5 2.2 0.091 13.2 0.8 2.4 2 0 0 2 2 2 0 Ribosomal protein L9, C-terminal domain OmpH PF03938.14 ORF103680 - 7.6 6.9 18.2 0.52 10.6 3.7 3.0 2 2 1 3 3 3 0 Outer membrane protein (OmpH-like) MscS_porin PF12795.7 NODE_17950_length_1045_cov_3.432673_g13681_i0reverse_frame_2 - 3e-29 102.3 37.9 3e-29 102.3 37.9 2.7 2 1 1 3 3 3 1 Mechanosensitive ion channel porin domain DIRP PF06584.13 NODE_17950_length_1045_cov_3.432673_g13681_i0reverse_frame_2 - 0.0048 17.1 0.7 0.022 14.9 0.7 2.2 1 0 0 1 1 1 1 DIRP T2SSF PF00482.23 NODE_17950_length_1045_cov_3.432673_g13681_i0reverse_frame_2 - 2.5 8.1 11.6 6.1 6.8 2.4 3.3 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein F DUF5463 PF17551.2 NODE_17941_length_1045_cov_105.891089_g12568_i1reverse_frame_3 - 0.11 12.4 5.6 4.2 7.4 0.4 2.9 2 0 0 2 2 2 0 Family of unknown function (DUF5463) Herpes_LMP1 PF05297.11 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_2 - 1.5 7.9 7.7 2.1 7.5 7.7 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) THUMP PF02926.17 NODE_17940_length_1045_cov_107.042574_g11548_i1reverse_frame_2 - 2.4e-05 24.5 1.1 0.00015 21.9 0.1 2.5 2 0 0 2 2 2 1 THUMP domain Rubredoxin PF00301.20 NODE_17922_length_1045_cov_1613.268317_g13660_i0forward_frame_3 - 0.21 11.6 0.0 0.35 10.9 0.0 1.3 1 0 0 1 1 1 0 Rubredoxin Flu_NS2 PF00601.19 NODE_17870_length_1047_cov_330.416008_g13619_i0reverse_frame_2 - 0.34 11.2 5.4 1.8 8.9 0.2 3.1 3 0 0 3 3 3 0 Influenza non-structural protein (NS2) SecIII_SopE_N PF05364.14 NODE_17866_length_1047_cov_367.602767_g13616_i0forward_frame_3 - 0.1 12.7 0.3 0.2 11.7 0.3 1.4 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Asp PF00026.23 NODE_17866_length_1047_cov_367.602767_g13616_i0forward_frame_2 - 2.5e-40 138.9 1.6 3.1e-40 138.5 1.6 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_17866_length_1047_cov_367.602767_g13616_i0forward_frame_2 - 4.2e-08 33.6 1.4 8.7e-06 26.1 0.2 2.2 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal ABC_tran PF00005.27 ORF98194 - 3.6e-30 105.3 0.1 6.1e-30 104.5 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF98194 - 4.1e-10 39.5 1.3 1.6e-05 24.4 0.3 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF98194 - 1.3e-05 25.1 0.1 0.013 15.3 0.1 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system NB-ARC PF00931.22 ORF98194 - 0.002 17.4 3.1 0.025 13.8 3.1 2.1 1 1 0 1 1 1 1 NB-ARC domain MMR_HSR1 PF01926.23 ORF98194 - 0.0025 17.9 0.2 0.0076 16.3 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF98194 - 0.0053 16.5 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF98194 - 0.0085 15.8 0.2 0.014 15.2 0.2 1.3 1 0 0 1 1 1 1 AAA ATPase domain DUF87 PF01935.17 ORF98194 - 0.01 16.0 1.0 0.018 15.1 0.2 1.8 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_23 PF13476.6 ORF98194 - 0.012 16.1 1.6 0.032 14.7 1.6 1.9 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF98194 - 0.025 14.3 0.3 0.27 10.9 0.1 2.0 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 ORF98194 - 0.026 13.5 0.5 0.091 11.6 0.5 1.8 1 1 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ATP-synt_ab PF00006.25 ORF98194 - 0.064 12.9 0.0 0.08 12.6 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_7 PF12775.7 ORF98194 - 0.075 12.5 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region HTH_46 PF15977.5 ORF98194 - 0.12 12.4 0.0 3.6 7.7 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA binding Dynein_C PF18199.1 ORF97324 - 5.1e-115 383.9 0.1 6e-115 383.7 0.1 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF97324 - 3.4e-06 27.0 0.0 7.3e-06 25.9 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain DUF4148 PF13663.6 ORF97324 - 0.14 12.4 0.2 0.3 11.3 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) Wzz PF02706.15 ORF93880 - 6.8e-15 55.1 0.9 1.2e-14 54.3 0.0 1.9 2 0 0 2 2 2 1 Chain length determinant protein GNVR PF13807.6 ORF93880 - 0.011 15.6 0.3 0.13 12.2 0.0 2.5 2 0 0 2 2 2 0 G-rich domain on putative tyrosine kinase Alpha-L-AF_C PF06964.12 ORF93880 - 0.14 12.3 1.1 3.2 7.8 1.1 2.2 1 1 0 1 1 1 0 Alpha-L-arabinofuranosidase C-terminal domain Ank_2 PF12796.7 ORF88097 - 3.1e-21 75.8 0.0 8.9e-11 42.2 0.0 3.5 3 1 1 4 4 4 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF88097 - 7.1e-17 61.5 0.4 0.00027 21.4 0.0 5.2 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF88097 - 2.4e-13 50.0 0.4 0.0038 17.5 0.1 4.9 4 2 1 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF88097 - 1.6e-09 37.2 0.6 0.0037 17.7 0.0 5.8 5 1 1 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF88097 - 1.1e-08 35.1 3.5 0.44 11.1 0.0 4.9 4 2 1 5 5 5 3 Ankyrin repeat p31comet PF06581.12 ORF88097 - 0.13 11.4 0.9 1.3 8.2 0.0 2.2 2 0 0 2 2 2 0 Mad1 and Cdc20-bound-Mad2 binding Peptidase_C12 PF01088.21 ORF87302 - 7.8e-62 208.7 1.1 9e-62 208.6 0.0 1.6 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase, family 1 UCH_C PF18031.1 ORF87302 - 7.5e-18 64.2 4.2 7.5e-18 64.2 4.2 2.1 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolases COX1 PF00115.20 ORF86042 - 6.4e-78 262.5 35.7 7.7e-78 262.3 35.7 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF4200 PF13863.6 ORF83604 - 0.018 15.4 24.4 0.018 15.4 24.4 4.1 2 2 1 3 3 3 0 Domain of unknown function (DUF4200) LCIB_C_CA PF18599.1 ORF83604 - 3 7.1 12.5 0.43 9.8 7.5 2.1 1 1 1 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases NPV_P10 PF05531.12 ORF83604 - 6.9 7.2 13.5 3.1 8.3 0.4 3.3 1 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Enolase_C PF00113.22 ORF81682 - 6.4e-135 449.1 0.0 7.6e-135 448.9 0.0 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 ORF81682 - 2.5e-16 60.0 0.1 5.6e-16 58.9 0.1 1.6 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 ORF81682 - 3e-08 33.5 0.0 7.7e-08 32.2 0.0 1.7 1 1 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 ORF81682 - 1.4e-06 27.7 0.4 1.4e-06 27.7 0.4 1.6 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus RSN1_TM PF13967.6 ORF80255 - 1.1 9.0 0.0 1.1 9.0 0.0 2.7 3 0 0 3 3 3 0 Late exocytosis, associated with Golgi transport DUF1345 PF07077.11 ORF78132 - 0.059 13.1 15.9 0.25 11.1 5.4 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1345) HemY_N PF07219.13 ORF78132 - 2.7 8.3 8.8 24 5.2 0.2 3.4 3 0 0 3 3 3 0 HemY protein N-terminus Mg_trans_NIPA PF05653.14 ORF6965 - 1.8e-18 66.7 3.8 2.2e-18 66.4 3.8 1.1 1 0 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 ORF6965 - 0.0033 17.6 1.2 0.0033 17.6 1.2 3.0 3 0 0 3 3 3 2 EamA-like transporter family Epimerase PF01370.21 ORF66890 - 3e-22 79.2 0.0 6.1e-22 78.3 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF66890 - 1.9e-18 66.5 0.0 2.7e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF66890 - 6.3e-14 52.1 0.0 1.1e-13 51.3 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 ORF66890 - 8.9e-12 45.3 0.0 1.8e-11 44.2 0.0 1.6 1 1 1 2 2 2 1 NAD(P)H-binding NAD_binding_4 PF07993.12 ORF66890 - 9.3e-07 28.3 0.0 1.7e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 Male sterility protein NmrA PF05368.13 ORF66890 - 7.1e-05 22.5 0.0 0.0002 21.0 0.0 1.9 1 1 0 1 1 1 1 NmrA-like family Polysacc_synt_2 PF02719.15 ORF66890 - 0.00053 19.2 0.0 0.00095 18.4 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF66890 - 0.0006 19.8 0.0 0.0038 17.1 0.0 1.9 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF66890 - 0.045 14.0 0.0 0.084 13.1 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain HA2 PF04408.23 ORF65131 - 7.9e-26 90.5 0.0 2.2e-25 89.0 0.0 1.7 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 ORF65131 - 1.8e-22 79.5 0.0 3e-22 78.8 0.0 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold SCO1-SenC PF02630.14 ORF65131 - 0.024 14.6 0.0 0.053 13.4 0.0 1.5 1 0 0 1 1 1 0 SCO1/SenC COX1 PF00115.20 ORF63596 - 6.4e-78 262.5 35.7 7.7e-78 262.3 35.7 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Cation_efflux PF01545.21 ORF56597 - 4.1e-11 43.0 0.0 9.1e-06 25.5 0.0 2.0 2 0 0 2 2 2 2 Cation efflux family BofC_C PF08955.10 ORF56597 - 0.14 12.3 0.0 0.33 11.0 0.0 1.6 1 0 0 1 1 1 0 BofC C-terminal domain MFS_1 PF07690.16 ORF52013 - 9.3e-17 61.0 34.9 1.8e-15 56.7 21.2 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Glyco_transf_9 PF01075.17 ORF51811 - 7.2e-90 300.6 0.0 8.6e-90 300.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) PS_pyruv_trans PF04230.13 ORF51811 - 0.0046 16.9 0.0 0.41 10.5 0.0 2.3 3 0 0 3 3 3 2 Polysaccharide pyruvyl transferase Glyco_transf_4 PF13439.6 ORF51811 - 0.034 14.1 0.2 0.088 12.8 0.1 1.9 2 1 0 2 2 2 0 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 ORF51811 - 0.13 12.3 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like TetR_C_23 PF17931.1 ORF48170 - 5.3 7.2 10.2 0.22 11.7 3.0 2.4 3 1 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Peptidase_M8 PF01457.16 ORF46147 - 1.8e-27 96.2 4.8 2.6e-27 95.7 4.8 1.2 1 0 0 1 1 1 1 Leishmanolysin Fmp27_SW PF10305.9 ORF42545 - 0.39 11.4 2.3 2.9 8.7 0.1 2.7 2 1 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain DUF1465 PF07323.12 ORF42396 - 0.63 9.9 5.9 0.31 10.9 0.5 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1465) DUF4140 PF13600.6 ORF42396 - 0.83 10.1 7.2 5.9 7.4 1.0 3.3 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) Seryl_tRNA_N PF02403.22 ORF42396 - 0.94 9.7 25.9 3.6 7.9 0.8 4.2 2 1 2 4 4 4 0 Seryl-tRNA synthetase N-terminal domain FlaC_arch PF05377.11 ORF42396 - 1.8 9.0 17.5 0.51 10.8 0.4 4.1 3 2 0 3 3 3 0 Flagella accessory protein C (FlaC) Spc24 PF08286.11 ORF42396 - 2.2 8.5 22.8 0.15 12.3 6.8 3.4 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 Cep57_MT_bd PF06657.13 ORF42396 - 2.6 8.6 10.0 7.5 7.1 1.0 3.5 3 1 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF848 PF05852.11 ORF42396 - 3.5 7.7 14.7 4.7 7.3 5.3 3.3 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) CENP-F_leu_zip PF10473.9 ORF42396 - 3.7 7.6 24.0 35 4.4 14.5 3.6 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CLZ PF16526.5 ORF42396 - 7.2 7.1 14.2 28 5.2 2.9 3.9 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Ion_trans PF00520.31 ORF36982 - 9.7e-05 21.7 4.6 0.00013 21.3 4.6 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF36982 - 0.0031 17.3 0.0 0.017 15.1 0.0 2.3 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF36982 - 0.0035 16.8 0.0 0.016 14.7 0.0 2.1 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF36982 - 0.054 13.0 0.0 0.22 11.1 0.0 2.0 2 0 0 2 2 2 0 EF hand LeuA_dimer PF08502.10 ORF33228 - 4.3e-36 123.7 0.4 8e-36 122.9 0.4 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain HMGL-like PF00682.19 ORF33228 - 3.6e-33 115.2 0.6 7e-33 114.3 0.6 1.5 1 0 0 1 1 1 1 HMGL-like Snapin_Pallidin PF14712.6 ORF31793 - 0.0082 16.5 9.6 0.48 10.9 1.2 2.8 1 1 0 2 2 2 2 Snapin/Pallidin Lebercilin PF15619.6 ORF31793 - 0.011 15.5 17.7 0.1 12.2 7.7 2.5 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease LPD13 PF18825.1 ORF31793 - 0.015 15.1 0.7 0.015 15.1 0.7 2.6 2 1 1 3 3 3 0 Large polyvalent protein-associated domain 13 Spectrin_like PF18373.1 ORF31793 - 0.016 15.3 0.5 0.076 13.1 0.2 2.3 1 1 0 2 2 2 0 Spectrin like domain Med9 PF07544.13 ORF31793 - 0.15 12.2 0.2 0.15 12.2 0.2 3.2 3 0 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 MscS_porin PF12795.7 ORF31793 - 0.16 11.5 9.3 0.45 10.0 0.8 2.4 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain FUSC PF04632.12 ORF31793 - 0.19 10.2 2.9 0.24 9.9 2.9 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family TMF_DNA_bd PF12329.8 ORF31793 - 0.46 10.5 12.4 0.44 10.6 5.0 3.4 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding SlyX PF04102.12 ORF31793 - 0.47 11.1 10.7 4 8.1 0.2 3.4 2 1 2 4 4 4 0 SlyX CENP-F_leu_zip PF10473.9 ORF31793 - 1.4 9.0 19.6 0.13 12.3 2.1 2.5 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 L31 PF09784.9 ORF31793 - 2 8.9 4.9 0.64 10.5 1.2 2.2 2 2 0 2 2 2 0 Mitochondrial ribosomal protein L31 DUF1664 PF07889.12 ORF31793 - 2.1 8.4 5.6 6.5 6.8 0.9 3.0 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) ATG16 PF08614.11 ORF31793 - 2.3 8.4 16.7 0.21 11.8 4.1 2.8 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF4140 PF13600.6 ORF31793 - 3.1 8.3 8.1 50 4.4 4.5 3.1 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) ZapB PF06005.12 ORF31793 - 4.9 7.7 10.6 0.39 11.2 0.9 3.0 2 1 0 2 2 2 0 Cell division protein ZapB TMCO5 PF14992.6 ORF31793 - 5.4 6.5 17.4 2.8 7.4 9.5 2.1 1 1 1 2 2 2 0 TMCO5 family Peptidase_C12 PF01088.21 ORF29702 - 7.8e-62 208.7 1.1 9e-62 208.6 0.0 1.6 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase, family 1 UCH_C PF18031.1 ORF29702 - 7.5e-18 64.2 4.2 7.5e-18 64.2 4.2 2.1 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolases Ank_2 PF12796.7 ORF29685 - 9e-51 170.4 1.0 1.4e-15 57.6 0.0 3.9 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF29685 - 5.5e-39 131.7 5.1 9.3e-09 35.4 0.0 6.5 1 1 5 6 6 6 6 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF29685 - 2e-37 127.1 2.4 1.1e-08 35.4 0.1 5.1 1 1 6 7 7 7 7 Ankyrin repeats (many copies) Ank PF00023.30 ORF29685 - 9.7e-35 117.5 4.5 8.3e-07 29.2 0.0 7.0 7 0 0 7 7 7 6 Ankyrin repeat Ank_3 PF13606.6 ORF29685 - 4e-31 103.6 0.6 2.2e-05 24.5 0.0 6.7 6 0 0 6 6 6 6 Ankyrin repeat ubiquitin PF00240.23 ORF29685 - 0.00051 19.7 0.0 0.00094 18.9 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family DUF4205 PF13898.6 ORF29685 - 0.0046 15.9 0.1 2.3 7.1 0.0 2.8 3 1 1 4 4 4 2 Domain of unknown function (DUF4205) Rad60-SLD PF11976.8 ORF29685 - 0.005 16.6 0.0 0.0089 15.8 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Nif11 PF07862.11 ORF29685 - 0.16 12.3 0.6 12 6.3 0.1 3.2 4 0 0 4 4 4 0 Nif11 domain Aa_trans PF01490.18 ORF29456 - 1.1e-22 80.3 17.2 2.8e-22 79.0 17.2 1.6 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein CheW PF01584.19 ORF26700 - 8.6e-28 96.7 1.0 1.4e-27 96.0 1.0 1.3 1 0 0 1 1 1 1 CheW-like domain HATPase_c PF02518.26 ORF26700 - 3.7e-18 66.1 0.2 6.1e-18 65.4 0.2 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FMO-like PF00743.19 ORF26170 - 3.9e-25 88.3 0.0 2.3e-24 85.7 0.0 1.8 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF26170 - 3.9e-08 32.9 0.0 1e-06 28.2 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF26170 - 5.6e-07 29.1 0.0 0.0031 16.8 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF26170 - 7.4e-05 22.1 0.2 0.00014 21.1 0.0 1.4 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 ORF26170 - 0.0029 18.1 0.2 0.0086 16.6 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 ORF26170 - 0.0045 16.4 0.2 0.0072 15.7 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF26170 - 0.021 13.9 0.0 0.12 11.5 0.0 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A NAD_binding_7 PF13241.6 ORF26170 - 0.022 15.2 0.0 0.039 14.4 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding HAD_2 PF13419.6 ORF17994 - 1.6e-16 60.9 0.0 2.9e-16 60.1 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF17994 - 5.6e-13 49.6 0.7 1.5e-12 48.2 0.7 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF17994 - 0.0038 17.7 0.1 0.016 15.6 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF17994 - 0.011 15.8 0.2 0.068 13.2 0.1 2.2 2 0 0 2 2 2 0 HAD-hyrolase-like Ufm1 PF03671.14 ORF17994 - 0.096 12.8 0.1 0.22 11.6 0.1 1.6 1 0 0 1 1 1 0 Ubiquitin fold modifier 1 protein TPR_12 PF13424.6 ORF15673 - 4e-15 55.9 19.8 6.4e-07 29.6 0.1 4.2 3 1 2 5 5 5 4 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF15673 - 9.8e-06 25.2 14.3 0.0011 18.5 14.3 2.8 1 1 0 1 1 1 1 MalT-like TPR region TPR_10 PF13374.6 ORF15673 - 0.00039 20.2 10.2 0.017 15.0 0.1 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_15 PF13429.6 ORF15673 - 0.008 15.4 12.1 1.6 7.8 0.6 3.1 2 1 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF15673 - 0.0092 16.1 2.1 5.2 7.5 0.1 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF15673 - 0.022 14.8 5.9 0.47 10.5 0.1 3.6 3 1 1 4 4 4 0 Anaphase-promoting complex subunit 5 TPR_2 PF07719.17 ORF15673 - 0.046 13.9 13.2 4 7.8 0.2 5.5 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF15673 - 0.047 14.5 13.6 27 5.9 0.0 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat LodA_N PF17990.1 ORF15673 - 0.078 12.9 0.5 0.14 12.1 0.2 1.6 2 0 0 2 2 2 0 L-Lysine epsilon oxidase N-terminal DUF4253 PF14062.6 ORF15673 - 0.13 12.5 1.5 13 6.0 0.1 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4253) TPR_7 PF13176.6 ORF15673 - 1.1 9.4 7.1 15 5.9 0.1 4.7 4 1 1 5 5 5 0 Tetratricopeptide repeat Methyltransf_31 PF13847.6 ORF15474 - 7.9e-14 51.7 0.0 1.2e-13 51.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF15474 - 3.9e-11 43.5 0.0 6.6e-11 42.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF15474 - 1.7e-10 41.4 0.0 2.9e-10 40.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF15474 - 2.4e-07 31.4 0.0 4.4e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF15474 - 0.00022 20.6 0.0 0.00036 19.9 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 ORF15474 - 0.00025 20.9 0.0 0.00039 20.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF15474 - 0.053 13.0 0.0 0.55 9.7 0.0 2.0 2 0 0 2 2 2 0 Putative methyltransferase Methyltransf_24 PF13578.6 ORF15474 - 0.062 14.3 0.0 0.099 13.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF3450 PF11932.8 ORF109340 - 0.0051 16.2 1.4 0.0051 16.2 1.4 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF3450) Gemin7 PF11095.8 ORF109340 - 0.0092 15.8 0.0 0.02 14.8 0.0 1.5 1 0 0 1 1 1 1 Gem-associated protein 7 (Gemin7) GNAT_acetyltran PF12746.7 ORF109340 - 0.56 9.7 12.5 1.7 8.1 3.1 2.2 2 0 0 2 2 2 0 GNAT acetyltransferase Nop53 PF07767.11 ORF109340 - 0.97 8.8 33.4 1.6 8.1 11.9 2.2 2 0 0 2 2 2 0 Nop53 (60S ribosomal biogenesis) Fzo_mitofusin PF04799.13 ORF109340 - 7.5 6.1 10.5 0.5 9.9 1.2 2.8 2 1 1 3 3 3 0 fzo-like conserved region DUF2203 PF09969.9 ORF109340 - 9.5 7.0 13.9 7.5 7.3 1.3 3.4 2 1 2 4 4 4 0 Uncharacterized conserved protein (DUF2203) CHAT PF12770.7 ORF106934 - 2.2e-54 184.8 0.2 2.6e-54 184.6 0.2 1.0 1 0 0 1 1 1 1 CHAT domain Peptidase_C50 PF03568.17 ORF106934 - 1.1e-05 24.8 0.3 0.021 14.0 0.0 2.1 2 0 0 2 2 2 2 Peptidase family C50 Peptidase_M8 PF01457.16 ORF104200 - 1.8e-27 96.2 4.8 2.6e-27 95.7 4.8 1.2 1 0 0 1 1 1 1 Leishmanolysin SBP_bac_8 PF13416.6 ORF102529 - 6.4e-39 134.5 7.2 8.2e-39 134.1 7.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 ORF102529 - 2.9e-38 131.7 3.2 4e-38 131.2 3.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 ORF102529 - 1.6e-14 54.2 0.0 2.4e-14 53.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 ORF102529 - 2.1e-13 50.9 11.2 3.8e-13 50.1 11.2 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Lipoprotein_8 PF02030.15 ORF102529 - 2e-09 36.8 0.1 7.5e-09 34.8 0.1 1.8 2 0 0 2 2 2 1 Hypothetical lipoprotein (MG045 family) RNA_pol_Rpb2_4 PF04566.13 ORF10092 - 0.16 12.2 1.2 3 8.2 0.5 2.8 2 0 0 2 2 2 0 RNA polymerase Rpb2, domain 4 EFG_IV PF03764.18 NODE_18108_length_1040_cov_111.298507_g13803_i0forward_frame_1 - 5.1e-19 68.2 0.0 1e-18 67.2 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_C PF00679.24 NODE_18108_length_1040_cov_111.298507_g13803_i0forward_frame_1 - 1.5e-17 63.4 0.0 3.2e-17 62.4 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus zf-CCCH_3 PF15663.5 NODE_18079_length_1041_cov_3.483101_g13779_i0reverse_frame_1 - 0.26 11.5 2.7 0.64 10.3 2.7 1.6 1 0 0 1 1 1 0 Zinc-finger containing family RNA_pol_Rpb2_7 PF04560.20 NODE_18072_length_1041_cov_114.708748_g13773_i0reverse_frame_1 - 0.15 12.5 0.9 0.4 11.1 0.9 1.7 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 7 PHD PF00628.29 NODE_18072_length_1041_cov_114.708748_g13773_i0reverse_frame_1 - 2.8 7.9 9.4 0.36 10.7 4.6 1.9 2 0 0 2 2 2 0 PHD-finger CsgF PF10614.9 ORF9907 - 0.14 12.3 0.2 0.14 12.3 0.2 2.2 2 1 0 2 2 2 0 Type VIII secretion system (T8SS), CsgF protein Tuberin PF03542.16 ORF9907 - 0.72 8.9 7.7 0.026 13.7 1.6 1.7 2 0 0 2 2 2 0 Tuberin BTB PF00651.31 ORF98201 - 3.1e-11 43.5 0.0 5.3e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 BTB/POZ domain Skp1_POZ PF03931.15 ORF98201 - 0.045 13.9 1.7 0.053 13.7 0.2 1.9 2 0 0 2 2 2 0 Skp1 family, tetramerisation domain Abhydrolase_1 PF00561.20 ORF96418 - 3.6e-19 69.4 0.0 2.4e-18 66.7 0.0 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF96418 - 4.8e-08 32.6 0.0 7.9e-05 22.0 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydro_lipase PF04083.16 ORF96418 - 0.001 18.6 0.0 0.0024 17.4 0.0 1.7 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Mpv17_PMP22 PF04117.12 ORF95662 - 3.3e-13 49.6 1.4 7.1e-13 48.6 1.4 1.6 1 0 0 1 1 1 1 Mpv17 / PMP22 family Ank_2 PF12796.7 ORF95057 - 4.1e-14 52.9 4.0 1.7e-10 41.3 0.3 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF95057 - 3.7e-13 48.4 5.5 1.7e-05 24.8 0.4 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF95057 - 2.4e-12 47.1 2.1 1e-07 32.3 0.6 2.6 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF95057 - 3.1e-12 46.5 3.7 8.1e-07 29.2 0.9 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF95057 - 3.9e-10 39.7 5.1 0.009 16.4 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeat DUF826 PF05696.11 ORF95057 - 0.035 14.2 0.1 0.98 9.6 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF826) Porin_1 PF00267.21 ORF92090 - 1.3e-146 488.4 24.8 1.4e-146 488.3 24.8 1.0 1 0 0 1 1 1 1 Gram-negative porin Porin_4 PF13609.6 ORF92090 - 1.3e-22 81.0 27.7 1.6e-22 80.6 27.7 1.0 1 0 0 1 1 1 1 Gram-negative porin OMP_b-brl PF13505.6 ORF92090 - 6.9e-05 23.1 31.5 0.015 15.4 17.6 2.8 1 1 1 2 2 2 2 Outer membrane protein beta-barrel domain Amidase PF01425.21 ORF90141 - 5.8e-32 111.2 0.0 9.8e-32 110.5 0.0 1.3 1 1 0 1 1 1 1 Amidase Peptidase_C14 PF00656.22 ORF86912 - 4.4e-11 43.2 0.0 6.9e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 Caspase domain GATase PF00117.28 ORF86838 - 6.1e-51 172.9 0.0 1.2e-50 172.0 0.0 1.4 2 0 0 2 2 2 1 Glutamine amidotransferase class-I CPSase_sm_chain PF00988.22 ORF86838 - 8.1e-38 129.1 0.0 1.5e-37 128.3 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain Peptidase_C26 PF07722.13 ORF86838 - 7e-08 32.5 0.1 3.2e-06 27.0 0.1 2.3 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 ORF86838 - 0.0033 17.2 0.0 0.0074 16.1 0.0 1.5 1 1 0 1 1 1 1 DJ-1/PfpI family MFS_1 PF07690.16 ORF73389 - 4.5e-11 42.3 27.3 4.5e-11 42.3 27.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily PetG PF02529.15 ORF73389 - 0.42 10.5 4.2 1.9 8.4 0.3 2.6 2 0 0 2 2 2 0 Cytochrome B6-F complex subunit 5 IMPDH PF00478.25 ORF68543 - 3.8e-78 262.9 0.5 4.7e-78 262.6 0.5 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 ORF68543 - 0.0064 15.6 6.0 0.0098 15.0 5.5 1.4 1 1 0 1 1 1 1 FMN-dependent dehydrogenase NBD_C PF17042.5 ORF68543 - 0.057 13.9 0.1 0.37 11.3 0.0 2.1 1 1 1 2 2 2 0 Nucleotide-binding C-terminal domain SIS PF01380.22 ORF66785 - 2.2e-15 56.6 0.0 3e-07 30.3 0.0 2.1 2 0 0 2 2 2 2 SIS domain PIP5K PF01504.18 ORF66360 - 2.7e-29 102.3 0.0 9.4e-27 93.9 0.0 2.1 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Exo_endo_phos PF03372.23 ORF66142 - 6.8e-07 29.0 0.0 1.3e-06 28.1 0.0 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family PIR PF00399.19 ORF66142 - 0.12 11.9 0.2 0.28 10.8 0.2 1.6 1 0 0 1 1 1 0 Yeast PIR protein repeat CPT PF07931.12 ORF65107 - 0.099 12.5 0.0 14 5.5 0.0 2.3 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein PP2C PF00481.21 ORF63995 - 2.7e-30 105.9 0.2 3.3e-30 105.6 0.2 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF63995 - 1.6e-10 41.2 0.7 9.9e-05 22.3 0.0 2.1 1 1 1 2 2 2 2 Stage II sporulation protein E (SpoIIE) PP2C_2 PF13672.6 ORF63995 - 0.0018 17.9 6.4 0.0041 16.8 5.9 1.8 1 1 1 2 2 2 1 Protein phosphatase 2C MreB_Mbl PF06723.13 ORF60940 - 1.3e-150 500.8 3.4 1.6e-150 500.5 3.4 1.0 1 0 0 1 1 1 1 MreB/Mbl protein HSP70 PF00012.20 ORF60940 - 2.3e-13 49.2 0.2 4.6e-13 48.2 0.1 1.6 1 1 1 2 2 2 1 Hsp70 protein FtsA PF14450.6 ORF60940 - 2.4e-11 43.9 0.2 8.2e-11 42.2 0.0 1.9 2 0 0 2 2 2 1 Cell division protein FtsA Actin PF00022.19 ORF60940 - 3.4e-10 39.1 0.0 2.3e-06 26.5 0.0 2.3 1 1 0 2 2 2 2 Actin PilM_2 PF11104.8 ORF60940 - 1.2e-07 31.2 0.0 0.0025 16.9 0.0 2.4 2 0 0 2 2 2 2 Type IV pilus assembly protein PilM; Ppx-GppA PF02541.16 ORF60940 - 0.00063 19.3 0.1 0.0011 18.5 0.1 1.4 1 0 0 1 1 1 1 Ppx/GppA phosphatase family EutA PF06277.11 ORF60940 - 0.0026 16.7 0.2 0.0041 16.0 0.2 1.3 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutA DDR PF08841.10 ORF60940 - 0.0042 16.1 0.4 0.012 14.7 0.1 1.8 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain Met_10 PF02475.16 ORF60909 - 0.00091 19.0 0.0 0.0012 18.6 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 ORF60909 - 0.0018 18.0 0.0 0.0035 17.0 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Acyl-CoA_dh_N PF02771.16 ORF59934 - 3.6e-27 95.3 0.0 6.1e-27 94.5 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 ORF59934 - 2e-22 79.2 0.0 5.8e-22 77.7 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 ORF59934 - 4.5e-08 33.4 0.1 9.6e-08 32.4 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain WcbI PF18588.1 ORF58061 - 0.076 12.6 0.3 0.22 11.1 0.0 1.8 2 0 0 2 2 2 0 Polysaccharide biosynthesis enzyme WcbI Rho_RNA_bind PF07497.12 ORF53419 - 0.15 12.0 2.1 6.3 6.8 0.3 3.3 2 1 1 3 3 3 0 Rho termination factor, RNA-binding domain Ank_2 PF12796.7 ORF49083 - 4.1e-14 52.9 4.0 1.7e-10 41.3 0.3 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF49083 - 3.7e-13 48.4 5.5 1.7e-05 24.8 0.4 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF49083 - 2.4e-12 47.1 2.1 1e-07 32.3 0.6 2.6 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF49083 - 3.1e-12 46.5 3.7 8.1e-07 29.2 0.9 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF49083 - 3.9e-10 39.7 5.1 0.009 16.4 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeat DUF826 PF05696.11 ORF49083 - 0.035 14.2 0.1 0.98 9.6 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF826) RRM_1 PF00076.22 ORF48019 - 8.3e-12 44.8 0.0 1.3e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF48019 - 1.1e-09 37.9 16.3 1.3e-05 25.0 3.3 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF48019 - 1.3e-07 31.2 17.4 0.00022 20.9 2.6 2.6 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF48019 - 4.8e-05 23.2 12.7 0.00089 19.2 0.3 3.0 3 0 0 3 3 3 2 Zinc knuckle OB_RNB PF08206.11 ORF48019 - 0.0027 17.4 0.2 0.028 14.1 0.2 2.9 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_4 PF14392.6 ORF48019 - 0.0029 17.3 6.8 0.22 11.3 1.3 2.4 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_2 PF13696.6 ORF48019 - 0.025 14.4 11.7 0.34 10.8 2.1 2.3 2 0 0 2 2 2 0 Zinc knuckle # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks38.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks38.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks38.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks38.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- BNR_4 PF15892.5 NODE_81960_length_194_cov_0.830189_g74019_i0reverse_frame_3 - 0.062 12.7 0.0 0.068 12.5 0.0 1.2 1 0 0 1 1 1 0 BNR repeat-containing family member DUF3810 PF12725.7 NODE_81957_length_194_cov_0.874214_g74016_i0forward_frame_2 - 8.6 5.6 8.3 9.5 5.5 8.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Dehalogenase PF13486.6 NODE_81954_length_194_cov_0.918239_g74013_i0reverse_frame_3 - 0.054 12.9 0.0 0.061 12.7 0.0 1.0 1 0 0 1 1 1 0 Reductive dehalogenase subunit Pellino PF04710.14 NODE_81953_length_194_cov_0.924528_g74012_i0reverse_frame_2 - 0.067 11.9 0.1 0.073 11.7 0.1 1.0 1 0 0 1 1 1 0 Pellino MRAP PF15183.6 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.0095 15.9 0.3 0.011 15.7 0.3 1.1 1 0 0 1 1 1 1 Melanocortin-2 receptor accessory protein family HemY_N PF07219.13 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.013 15.7 1.3 0.015 15.5 1.3 1.1 1 0 0 1 1 1 0 HemY protein N-terminus Trp_oprn_chp PF09534.10 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.031 14.1 0.6 0.034 14.0 0.6 1.0 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Pilin_N PF07790.11 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.036 15.0 1.0 0.039 14.9 1.0 1.1 1 0 0 1 1 1 0 Archaeal Type IV pilin, N-terminal Mito_carr PF00153.27 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.076 12.9 0.1 0.086 12.8 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial carrier protein DUF4834 PF16118.5 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.084 13.9 0.5 0.091 13.7 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 2.9 8.8 6.2 5.2 8.0 6.2 1.5 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain CBM_10 PF02013.16 NODE_81930_length_194_cov_1.000000_g73989_i0reverse_frame_3 - 0.018 15.5 0.1 0.018 15.5 0.1 1.6 2 0 0 2 2 2 0 Cellulose or protein binding domain BC10 PF06726.12 NODE_81930_length_194_cov_1.000000_g73989_i0reverse_frame_2 - 0.0099 16.1 0.0 0.0099 16.1 0.0 1.7 2 0 0 2 2 2 1 Bladder cancer-related protein BC10 DDDD PF10161.9 NODE_81930_length_194_cov_1.000000_g73989_i0forward_frame_3 - 0.13 12.0 0.2 0.16 11.8 0.2 1.2 1 0 0 1 1 1 0 Putative mitochondrial precursor protein NAD_binding_1 PF00175.21 NODE_81923_length_194_cov_1.000000_g73982_i0forward_frame_2 - 2.1e-06 28.3 0.0 2.4e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 NODE_81923_length_194_cov_1.000000_g73982_i0forward_frame_2 - 2.5e-05 24.5 0.0 3.1e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Ferric reductase NAD binding domain Zn-ribbon_8 PF09723.10 NODE_81922_length_194_cov_1.006289_g73981_i0reverse_frame_3 - 1.2 9.3 7.8 0.4 10.8 3.0 2.0 1 1 1 2 2 2 0 Zinc ribbon domain Noelin-1 PF12308.8 NODE_81917_length_194_cov_1.006289_g73976_i0forward_frame_3 - 0.027 14.4 0.5 0.031 14.2 0.5 1.1 1 0 0 1 1 1 0 Neurogenesis glycoprotein NrsF PF06532.11 NODE_81916_length_194_cov_1.006289_g73975_i0forward_frame_3 - 0.052 13.3 0.2 0.055 13.2 0.2 1.0 1 0 0 1 1 1 0 Negative regulator of sigma F FANCM-MHF_bd PF16783.5 NODE_81916_length_194_cov_1.006289_g73975_i0forward_frame_3 - 0.12 12.4 0.3 0.15 12.1 0.3 1.1 1 0 0 1 1 1 0 FANCM to MHF binding domain Lectin_N PF03954.14 NODE_81913_length_194_cov_1.006289_g73972_i0forward_frame_3 - 0.012 15.3 0.8 0.014 15.1 0.8 1.1 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF641 PF04859.12 NODE_81913_length_194_cov_1.006289_g73972_i0forward_frame_3 - 0.022 15.1 0.4 0.024 15.0 0.4 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) zf-C3H2C3 PF17122.5 NODE_81911_length_194_cov_1.006289_g73970_i0reverse_frame_2 - 0.021 14.8 0.3 0.034 14.2 0.3 1.3 1 0 0 1 1 1 0 Zinc-finger DUF982 PF06169.12 NODE_81908_length_194_cov_1.006289_g73967_i0reverse_frame_3 - 0.078 13.0 0.3 0.1 12.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF982) TrkA_TMD PF18613.1 NODE_81897_length_194_cov_1.006289_g73956_i0reverse_frame_3 - 3.4 7.2 7.9 4.9 6.7 7.9 1.3 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain zf-SAP30 PF13866.6 NODE_81888_length_194_cov_1.006289_g73947_i0forward_frame_3 - 0.092 12.9 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 SAP30 zinc-finger mRNA_cap_enzyme PF01331.19 NODE_81883_length_194_cov_1.006289_g73942_i0forward_frame_3 - 0.0071 16.2 0.0 0.0087 15.9 0.0 1.1 1 0 0 1 1 1 1 mRNA capping enzyme, catalytic domain Lebercilin PF15619.6 NODE_81870_length_194_cov_1.006289_g73929_i0reverse_frame_3 - 0.0014 18.4 5.9 0.0016 18.2 5.9 1.0 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease FAM195 PF14799.6 NODE_81870_length_194_cov_1.006289_g73929_i0reverse_frame_3 - 0.0081 16.5 1.3 0.01 16.1 1.3 1.2 1 0 0 1 1 1 1 FAM195 family TMEM70 PF06979.12 NODE_81870_length_194_cov_1.006289_g73929_i0forward_frame_2 - 0.16 12.4 3.9 0.17 12.3 3.9 1.1 1 0 0 1 1 1 0 Assembly, mitochondrial proton-transport ATP synth complex NUC205 PF08168.11 NODE_81867_length_194_cov_1.006289_g73926_i0reverse_frame_3 - 0.12 11.9 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 NUC205 domain DUF4470 PF14737.6 NODE_81865_length_194_cov_1.012579_g73924_i0reverse_frame_3 - 0.028 14.6 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4470) zf-dskA_traR PF01258.17 NODE_81863_length_194_cov_1.056604_g73922_i0forward_frame_2 - 0.12 12.4 0.9 0.23 11.5 0.2 1.7 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger DUF3087 PF11286.8 NODE_81860_length_194_cov_1.075472_g73919_i0reverse_frame_3 - 0.015 14.8 0.1 0.017 14.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) zf-B_box PF00643.24 NODE_81859_length_194_cov_1.081761_g73918_i0forward_frame_2 - 0.022 14.9 2.5 0.033 14.3 2.5 1.2 1 0 0 1 1 1 0 B-box zinc finger GTP_EFTU PF00009.27 NODE_81856_length_194_cov_1.094340_g73915_i0reverse_frame_3 - 2.6e-17 63.0 0.7 2.7e-17 62.9 0.7 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain ABC_tran PF00005.27 NODE_81856_length_194_cov_1.094340_g73915_i0reverse_frame_3 - 0.048 14.2 0.1 0.05 14.1 0.1 1.1 1 0 0 1 1 1 0 ABC transporter MMR_HSR1 PF01926.23 NODE_81856_length_194_cov_1.094340_g73915_i0reverse_frame_3 - 0.049 13.7 0.0 0.05 13.7 0.0 1.1 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF2460 PF09343.10 NODE_81848_length_194_cov_1.132075_g73907_i0reverse_frame_3 - 0.049 13.1 0.0 0.051 13.1 0.0 1.0 1 0 0 1 1 1 0 Conserved hypothetical protein 2217 (DUF2460) NinD PF17466.2 NODE_81846_length_194_cov_1.132075_g73905_i0forward_frame_2 - 0.13 12.4 0.2 0.16 12.1 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function DUF5558 PF17713.1 NODE_81841_length_194_cov_1.157233_g73900_i0forward_frame_2 - 0.026 14.9 2.4 0.029 14.8 2.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5558) TFIIA_gamma_C PF02751.14 NODE_81840_length_194_cov_1.163522_g73899_i0forward_frame_2 - 0.2 11.8 0.5 0.35 11.1 0.5 1.6 1 1 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit KRTAP7 PF15034.6 NODE_81835_length_194_cov_1.182390_g73894_i0forward_frame_2 - 0.029 15.3 0.0 0.033 15.1 0.0 1.1 1 0 0 1 1 1 0 KRTAP type 7 family DUF2111 PF09884.9 NODE_81835_length_194_cov_1.182390_g73894_i0forward_frame_2 - 0.11 12.5 0.0 0.12 12.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2111) DUF1082 PF06449.11 NODE_81834_length_194_cov_1.182390_g73893_i0forward_frame_2 - 0.0028 17.4 1.2 0.0036 17.1 0.1 1.7 2 0 0 2 2 2 1 Mitochondrial domain of unknown function (DUF1082) OTOS PF15182.6 NODE_81829_length_194_cov_1.220126_g73888_i0forward_frame_3 - 0.48 10.4 4.7 0.59 10.1 4.7 1.2 1 0 0 1 1 1 0 Otospiralin DUF3218 PF11508.8 NODE_81828_length_194_cov_1.232704_g73887_i0forward_frame_2 - 0.11 12.0 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3218) Mpp10 PF04006.12 NODE_81826_length_194_cov_1.245283_g73885_i0reverse_frame_3 - 0.054 11.9 0.1 0.054 11.9 0.1 1.1 1 0 0 1 1 1 0 Mpp10 protein Pyridoxal_deC PF00282.19 NODE_81824_length_194_cov_1.245283_g73883_i0reverse_frame_2 - 0.11 11.1 0.1 0.12 11.1 0.1 1.0 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain Polo_box_2 PF18531.1 NODE_81822_length_194_cov_1.245283_g73881_i0reverse_frame_2 - 0.095 12.8 0.2 0.099 12.8 0.2 1.0 1 0 0 1 1 1 0 Polo box domain Potassium_chann PF11404.8 NODE_81817_length_194_cov_1.251572_g73876_i0reverse_frame_2 - 0.063 13.1 0.4 0.063 13.1 0.4 1.6 2 0 0 2 2 2 0 Potassium voltage-gated channel FYVE PF01363.21 NODE_81817_length_194_cov_1.251572_g73876_i0forward_frame_3 - 0.034 14.3 0.1 0.038 14.1 0.1 1.1 1 0 0 1 1 1 0 FYVE zinc finger Kelch_4 PF13418.6 NODE_81815_length_194_cov_1.257862_g73874_i0reverse_frame_2 - 9.3e-06 25.6 0.0 1.6e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_81815_length_194_cov_1.257862_g73874_i0reverse_frame_2 - 0.0001 22.5 0.0 0.00015 22.0 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 NODE_81815_length_194_cov_1.257862_g73874_i0reverse_frame_2 - 0.00021 21.5 0.7 0.00046 20.4 0.0 1.7 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_81815_length_194_cov_1.257862_g73874_i0reverse_frame_2 - 0.00071 19.1 0.0 0.001 18.6 0.0 1.3 1 0 0 1 1 1 1 Kelch motif HOOK PF05622.12 NODE_81814_length_194_cov_1.257862_g73873_i0forward_frame_3 - 0.011 13.9 0.8 0.012 13.8 0.8 1.0 1 0 0 1 1 1 0 HOOK protein zf-TFIIIC PF12660.7 NODE_81807_length_194_cov_1.270440_g73866_i0forward_frame_3 - 0.037 14.0 0.7 0.043 13.8 0.4 1.3 1 1 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex IF2_assoc PF08364.11 NODE_81806_length_194_cov_1.270440_g73865_i0forward_frame_3 - 0.092 13.0 0.1 0.16 12.2 0.1 1.4 1 0 0 1 1 1 0 Bacterial translation initiation factor IF-2 associated region Cullin_Nedd8 PF10557.9 NODE_81803_length_194_cov_1.283019_g73862_i0reverse_frame_3 - 0.049 13.7 0.5 0.22 11.6 0.5 2.0 1 1 0 1 1 1 0 Cullin protein neddylation domain DUF3373 PF11853.8 NODE_81801_length_194_cov_1.295597_g73860_i0forward_frame_3 - 0.06 12.4 0.1 0.06 12.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3373) DUF5083 PF16890.5 NODE_81800_length_194_cov_1.295597_g73859_i0forward_frame_3 - 0.029 14.1 1.2 0.033 13.9 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5083) TetR_C_1 PF02909.17 NODE_81797_length_194_cov_1.314465_g73856_i0forward_frame_3 - 0.015 15.1 0.0 0.018 14.9 0.0 1.0 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Toxin_9 PF02819.15 NODE_81794_length_194_cov_1.333333_g73853_i0reverse_frame_3 - 0.079 13.3 9.3 1.4 9.3 1.9 2.1 2 0 0 2 2 2 0 Spider toxin UL42 PF17638.2 NODE_81792_length_194_cov_1.333333_g73851_i0reverse_frame_3 - 0.1 12.6 1.4 0.11 12.4 1.4 1.1 1 0 0 1 1 1 0 HCMV UL42 Trp_Tyr_perm PF03222.13 NODE_81785_length_194_cov_1.389937_g73844_i0forward_frame_2 - 8.3e-05 21.8 0.8 8.8e-05 21.7 0.8 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DotD PF16816.5 NODE_81773_length_194_cov_1.433962_g73832_i0forward_frame_3 - 0.12 12.3 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 DotD protein DUF443 PF04276.12 NODE_81764_length_194_cov_1.484277_g73823_i0forward_frame_2 - 0.028 14.2 4.1 0.059 13.2 4.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF443) Sec62 PF03839.16 NODE_81763_length_194_cov_1.490566_g73822_i0reverse_frame_3 - 0.044 13.3 4.0 0.051 13.1 4.0 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 DUF4713 PF15831.5 NODE_81763_length_194_cov_1.490566_g73822_i0reverse_frame_3 - 0.44 11.0 7.7 0.57 10.7 7.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) Alpha-amylase PF00128.24 NODE_81755_length_194_cov_1.496855_g73814_i0forward_frame_3 - 0.038 13.6 0.0 0.041 13.5 0.0 1.0 1 0 0 1 1 1 0 Alpha amylase, catalytic domain DUF4211 PF13926.6 NODE_81755_length_194_cov_1.496855_g73814_i0forward_frame_2 - 0.064 13.3 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4211) RRM_5 PF13893.6 NODE_81750_length_194_cov_1.503145_g73809_i0reverse_frame_3 - 0.0091 15.6 0.8 0.0096 15.5 0.8 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Flp_N PF03930.14 NODE_81749_length_194_cov_1.503145_g73808_i0reverse_frame_2 - 0.035 14.1 0.1 0.047 13.7 0.1 1.1 1 0 0 1 1 1 0 Recombinase Flp protein N-terminus DUF1378 PF07125.11 NODE_81749_length_194_cov_1.503145_g73808_i0forward_frame_3 - 0.11 12.7 0.3 0.16 12.2 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) Corona_NS8 PF12093.8 NODE_81743_length_194_cov_1.509434_g73802_i0reverse_frame_3 - 0.018 15.6 0.4 0.02 15.5 0.4 1.1 1 0 0 1 1 1 0 Coronavirus NS8 protein HtrL_YibB PF09612.10 NODE_81743_length_194_cov_1.509434_g73802_i0forward_frame_3 - 0.028 13.9 0.2 0.029 13.9 0.2 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (HtrL_YibB) RcnB PF11776.8 NODE_81738_length_194_cov_1.509434_g73797_i0reverse_frame_2 - 0.014 15.4 0.2 0.022 14.8 0.2 1.3 1 0 0 1 1 1 0 Nickel/cobalt transporter regulator SAE2 PF08573.10 NODE_81727_length_194_cov_1.509434_g73786_i0reverse_frame_2 - 3.2 8.9 8.8 7.5 7.7 8.8 1.6 1 1 0 1 1 1 0 DNA repair protein endonuclease SAE2/CtIP C-terminus IN_DBD_C PF00552.21 NODE_81723_length_194_cov_1.534591_g73782_i0reverse_frame_3 - 0.13 11.5 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Integrase DNA binding domain TrkH PF02386.16 NODE_81723_length_194_cov_1.534591_g73782_i0reverse_frame_3 - 0.14 10.6 2.1 0.15 10.5 2.1 1.0 1 0 0 1 1 1 0 Cation transport protein LLC1 PF14945.6 NODE_81721_length_194_cov_1.566038_g73780_i0forward_frame_2 - 0.21 12.2 0.1 0.22 12.1 0.1 1.1 1 0 0 1 1 1 0 Normal lung function maintenance, Low in Lung Cancer 1 protein Prefoldin_2 PF01920.20 NODE_81719_length_194_cov_1.572327_g73778_i0reverse_frame_2 - 0.018 15.0 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit DASH_Dam1 PF08653.10 NODE_81719_length_194_cov_1.572327_g73778_i0reverse_frame_2 - 0.018 14.8 0.5 0.17 11.7 0.2 1.9 1 1 1 2 2 2 0 DASH complex subunit Dam1 Rab3-GTPase_cat PF13890.6 NODE_81719_length_194_cov_1.572327_g73778_i0reverse_frame_2 - 0.041 13.5 0.2 0.081 12.6 0.2 1.5 1 1 1 2 2 2 0 Rab3 GTPase-activating protein catalytic subunit Plk4_PB2 PF18409.1 NODE_81719_length_194_cov_1.572327_g73778_i0reverse_frame_2 - 0.047 14.4 0.1 0.052 14.2 0.1 1.1 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 SpaA PF17802.1 NODE_81714_length_194_cov_1.610063_g73773_i0forward_frame_2 - 0.081 13.3 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Prealbumin-like fold domain Ntox1 PF15500.6 NODE_81712_length_194_cov_1.610063_g73771_i0forward_frame_3 - 0.11 12.8 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative RNase-like toxin, toxin_1 DUF1993 PF09351.10 NODE_81709_length_194_cov_1.647799_g73768_i0reverse_frame_3 - 0.15 12.2 0.7 0.15 12.2 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) Ank_3 PF13606.6 NODE_81702_length_194_cov_1.685535_g73761_i0reverse_frame_2 - 0.0012 19.2 0.0 0.42 11.3 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_81702_length_194_cov_1.685535_g73761_i0reverse_frame_2 - 0.006 17.1 0.0 0.0069 17.0 0.0 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_81702_length_194_cov_1.685535_g73761_i0reverse_frame_2 - 0.064 13.6 0.0 8.5 6.8 0.0 2.1 1 1 0 2 2 2 0 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_81702_length_194_cov_1.685535_g73761_i0reverse_frame_2 - 0.14 12.8 0.1 8.5 7.1 0.0 2.0 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Antiterm PF03589.13 NODE_81700_length_194_cov_1.685535_g73759_i0reverse_frame_2 - 0.11 12.8 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Antitermination protein DDE_Tnp_1_3 PF13612.6 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_3 - 0.071 13.1 1.1 0.069 13.2 1.1 1.1 1 0 0 1 1 1 0 Transposase DDE domain Lebercilin PF15619.6 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.0027 17.4 0.7 0.0027 17.4 0.7 1.1 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF4164 PF13747.6 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.0091 16.3 2.5 0.065 13.5 1.2 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4164) GreA_GreB_N PF03449.15 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.035 14.3 3.0 0.91 9.7 0.9 2.1 1 1 1 2 2 2 0 Transcription elongation factor, N-terminal GvpL_GvpF PF06386.11 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.037 13.9 0.2 0.047 13.6 0.2 1.1 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF MapZ_EC1 PF18041.1 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.057 13.7 0.1 0.065 13.5 0.1 1.1 1 0 0 1 1 1 0 MapZ extracellular domain 1 ZapB PF06005.12 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.064 13.7 2.6 0.094 13.2 2.6 1.3 1 1 0 1 1 1 0 Cell division protein ZapB PCRF PF03462.18 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.076 12.9 0.2 0.079 12.8 0.2 1.0 1 0 0 1 1 1 0 PCRF domain DUF4110 PF13422.6 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.091 12.8 0.4 0.099 12.7 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4110) DUF809 PF05663.11 NODE_81697_length_194_cov_1.691824_g73756_i0reverse_frame_2 - 0.037 14.2 0.6 0.037 14.2 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF809) TP1 PF02079.16 NODE_81692_length_194_cov_1.716981_g73751_i0reverse_frame_3 - 0.073 13.0 0.7 0.1 12.5 0.7 1.2 1 0 0 1 1 1 0 Nuclear transition protein 1 DUF5381 PF17353.2 NODE_81690_length_194_cov_1.735849_g73749_i0forward_frame_2 - 0.0068 16.2 0.1 0.0072 16.1 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5381) PhaP_Bmeg PF09602.10 NODE_81681_length_194_cov_1.786164_g73740_i0forward_frame_3 - 0.1 12.5 0.0 0.12 12.4 0.0 1.0 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) CPSase_C PF18302.1 NODE_81680_length_194_cov_1.798742_g73739_i0forward_frame_3 - 0.96 10.1 3.8 0.61 10.6 1.6 1.9 2 0 0 2 2 2 0 Carbamoyl phosphate synthetase C-terminal domain DUF1647 PF07801.11 NODE_81680_length_194_cov_1.798742_g73739_i0forward_frame_2 - 0.037 13.8 0.1 0.037 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1647) TPR_22 PF18833.1 NODE_81679_length_194_cov_1.805031_g73738_i0forward_frame_3 - 0.024 14.7 0.2 0.026 14.7 0.2 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat Laminin_B PF00052.18 NODE_81678_length_194_cov_1.811321_g73737_i0forward_frame_3 - 0.13 12.1 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Laminin B (Domain IV) Alveol-reg_P311 PF11092.8 NODE_81678_length_194_cov_1.811321_g73737_i0forward_frame_2 - 0.1 12.7 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Neuronal protein 3.1 (p311) Topo-VIb_trans PF09239.11 NODE_81676_length_194_cov_1.823899_g73735_i0forward_frame_2 - 0.21 11.4 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Topoisomerase VI B subunit, transducer Nup84_Nup100 PF04121.13 NODE_81674_length_194_cov_1.849057_g73733_i0reverse_frame_2 - 0.27 9.3 0.0 0.31 9.1 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore protein 84 / 107 HicB PF05534.12 NODE_81669_length_194_cov_1.911950_g73728_i0forward_frame_2 - 0.18 11.7 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 HicB family Antimicrobial_8 PF08103.11 NODE_81662_length_194_cov_1.962264_g73721_i0reverse_frame_3 - 0.066 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Uperin family Attacin_C PF03769.15 NODE_81657_length_194_cov_2.006289_g73716_i0reverse_frame_2 - 0.093 13.0 0.0 0.093 13.0 0.0 1.1 1 0 0 1 1 1 0 Attacin, C-terminal region RecT PF03837.14 NODE_81657_length_194_cov_2.006289_g73716_i0forward_frame_2 - 2.2e-08 33.9 0.0 2.2e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 RecT family RNase_H PF00075.24 NODE_81655_length_194_cov_2.012579_g73714_i0reverse_frame_2 - 0.019 15.2 0.1 0.02 15.1 0.1 1.1 1 0 0 1 1 1 0 RNase H WAP PF00095.21 NODE_81654_length_194_cov_2.012579_g73713_i0forward_frame_3 - 0.00084 19.7 0.8 0.001 19.4 0.8 1.1 1 0 0 1 1 1 1 WAP-type (Whey Acidic Protein) 'four-disulfide core' SpvB PF03534.13 NODE_81653_length_194_cov_2.031447_g73712_i0reverse_frame_3 - 0.0098 15.1 0.9 0.0098 15.1 0.9 1.0 1 0 0 1 1 1 1 Salmonella virulence plasmid 65kDa B protein DUF2677 PF10838.8 NODE_81649_length_194_cov_2.075472_g73708_i0reverse_frame_2 - 0.09 12.7 0.0 0.09 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2677) UPF0220 PF05255.11 NODE_81647_length_194_cov_2.144654_g73706_i0forward_frame_3 - 0.0059 16.2 0.1 0.0059 16.2 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0220) DUF1345 PF07077.11 NODE_81647_length_194_cov_2.144654_g73706_i0forward_frame_2 - 0.019 14.7 0.9 0.019 14.7 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1345) DUF1065 PF06358.11 NODE_81647_length_194_cov_2.144654_g73706_i0forward_frame_2 - 0.056 13.4 0.1 0.059 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1065) V4R PF02830.18 NODE_81644_length_194_cov_2.169811_g73703_i0forward_frame_3 - 0.04 13.9 0.0 0.39 10.8 0.0 2.0 2 0 0 2 2 2 0 V4R domain CopG_antitoxin PF12441.8 NODE_81640_length_194_cov_2.201258_g73699_i0forward_frame_3 - 0.13 12.8 0.3 0.78 10.3 0.3 2.0 1 1 0 1 1 1 0 CopG antitoxin of type II toxin-antitoxin system TMCCDC2 PF15844.5 NODE_81636_length_194_cov_2.264151_g73695_i0reverse_frame_2 - 0.54 10.2 5.5 0.61 10.0 5.5 1.1 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 DUF4051 PF13260.6 NODE_81636_length_194_cov_2.264151_g73695_i0reverse_frame_2 - 1.8 8.3 8.3 0.13 12.0 3.2 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF4051) MSC PF09402.10 NODE_81636_length_194_cov_2.264151_g73695_i0reverse_frame_2 - 2.7 7.4 4.4 2.9 7.2 4.4 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain TFIID_20kDa PF03847.13 NODE_81632_length_194_cov_2.295597_g73691_i0reverse_frame_2 - 0.2 12.2 0.0 0.24 11.9 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A YIF1 PF03878.15 NODE_81631_length_194_cov_2.320755_g73690_i0reverse_frame_3 - 0.0042 16.6 0.5 0.005 16.4 0.5 1.2 1 1 0 1 1 1 1 YIF1 Glyphos_transf PF04464.14 NODE_81631_length_194_cov_2.320755_g73690_i0reverse_frame_3 - 0.025 13.6 0.0 0.027 13.5 0.0 1.0 1 0 0 1 1 1 0 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase tRNA_Me_trans PF03054.16 NODE_81623_length_194_cov_2.446541_g73682_i0reverse_frame_2 - 0.19 10.5 0.3 0.2 10.4 0.3 1.1 1 0 0 1 1 1 0 tRNA methyl transferase DUF1912 PF08930.10 NODE_81619_length_194_cov_2.490566_g73678_i0forward_frame_3 - 0.085 13.0 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1912) Y2_Tnp PF04986.13 NODE_81615_length_194_cov_2.572327_g73674_i0reverse_frame_3 - 0.1 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Putative transposase RepA1_leader PF08048.12 NODE_81610_length_194_cov_2.742138_g73669_i0reverse_frame_3 - 0.093 13.0 0.4 0.14 12.5 0.4 1.3 1 0 0 1 1 1 0 Tap RepA1 leader peptide HTH_Tnp_IS1 PF12759.7 NODE_81607_length_194_cov_2.805031_g73666_i0reverse_frame_3 - 0.12 12.0 0.6 10 5.8 0.0 2.8 2 1 0 2 2 2 0 InsA C-terminal domain FOP_dimer PF09398.10 NODE_81603_length_194_cov_2.937107_g73662_i0reverse_frame_3 - 0.0098 16.1 0.2 0.012 15.9 0.2 1.2 1 1 0 1 1 1 1 FOP N terminal dimerisation domain ASFV_L11L PF05293.11 NODE_81599_length_194_cov_3.018868_g73658_i0reverse_frame_2 - 0.032 14.6 2.6 0.038 14.3 2.6 1.1 1 0 0 1 1 1 0 African swine fever virus (ASFV) L11L protein DUF4315 PF14193.6 NODE_81594_length_194_cov_3.402516_g73653_i0reverse_frame_2 - 0.007 16.3 0.2 0.0087 16.1 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4315) GhoS PF11080.8 NODE_81594_length_194_cov_3.402516_g73653_i0reverse_frame_2 - 0.01 15.8 0.1 0.011 15.7 0.1 1.1 1 0 0 1 1 1 0 Endoribonuclease GhoS Herpes_LMP1 PF05297.11 NODE_81594_length_194_cov_3.402516_g73653_i0forward_frame_2 - 0.52 9.5 4.3 0.57 9.3 4.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Rib PF08428.10 NODE_81593_length_194_cov_3.433962_g73652_i0reverse_frame_2 - 0.14 12.2 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Rib/alpha-like repeat Docking PF08990.11 NODE_81579_length_194_cov_5.345912_g73638_i0forward_frame_2 - 0.5 10.0 0.0 0.5 10.0 0.0 1.6 2 0 0 2 2 2 0 Erythronolide synthase docking DRE2_N PF16803.5 NODE_81578_length_194_cov_7.327044_g73637_i0reverse_frame_3 - 0.013 15.7 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks390.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks390.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks390.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks390.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4422 PF14393.6 NODE_81567_length_194_cov_22.754717_g73626_i0forward_frame_3 - 0.022 14.6 0.0 0.022 14.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4422) AA_permease PF00324.21 NODE_81565_length_194_cov_23.943396_g73624_i0reverse_frame_2 - 0.46 9.0 5.0 0.52 8.8 5.0 1.0 1 0 0 1 1 1 0 Amino acid permease Methyltr_RsmF_N PF17125.5 NODE_81562_length_194_cov_28.729560_g73621_i0forward_frame_3 - 0.091 13.3 0.0 0.097 13.2 0.0 1.0 1 0 0 1 1 1 0 N-terminal domain of 16S rRNA methyltransferase RsmF RseC_MucC PF04246.12 NODE_81556_length_194_cov_32.578616_g73615_i0forward_frame_3 - 0.43 10.5 2.7 0.5 10.3 2.7 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC PMG PF05287.12 NODE_81554_length_194_cov_35.069182_g73613_i0forward_frame_2 - 0.00066 19.8 1.3 0.00075 19.6 1.3 1.0 1 0 0 1 1 1 1 PMG protein DUF3849 PF12960.7 NODE_81548_length_194_cov_40.081761_g73607_i0forward_frame_2 - 0.12 12.3 0.0 0.13 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3849) Peptidase_M41 PF01434.18 NODE_81545_length_194_cov_41.880503_g73604_i0forward_frame_2 - 0.035 13.9 0.1 0.039 13.8 0.1 1.0 1 0 0 1 1 1 0 Peptidase family M41 DUF5314 PF17241.2 NODE_81545_length_194_cov_41.880503_g73604_i0forward_frame_2 - 0.042 13.5 0.0 0.042 13.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5314) Bin3 PF06859.12 NODE_81544_length_194_cov_42.333333_g73603_i0reverse_frame_2 - 0.061 14.0 0.1 0.067 13.8 0.1 1.0 1 0 0 1 1 1 0 Bicoid-interacting protein 3 (Bin3) CblD PF07434.11 NODE_81540_length_194_cov_46.176101_g73599_i0forward_frame_3 - 0.032 13.2 0.1 0.033 13.2 0.1 1.0 1 0 0 1 1 1 0 CblD like pilus biogenesis initiator SspB PF04386.13 NODE_81537_length_194_cov_49.672956_g73596_i0reverse_frame_3 - 1.3 8.9 4.5 1.4 8.8 4.5 1.0 1 0 0 1 1 1 0 Stringent starvation protein B DUF5423 PF17461.2 NODE_81537_length_194_cov_49.672956_g73596_i0reverse_frame_3 - 6.7 5.5 12.2 44 2.8 12.7 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5423) OKR_DC_1_N PF03709.15 NODE_81535_length_194_cov_51.245283_g73594_i0reverse_frame_2 - 0.022 15.0 0.0 0.025 14.8 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain KI67R PF08065.12 NODE_81528_length_194_cov_56.754717_g73587_i0forward_frame_3 - 0.0045 17.5 0.5 0.0053 17.3 0.5 1.1 1 0 0 1 1 1 1 KI67R (NUC007) repeat Peptidase_M57 PF12388.8 NODE_81528_length_194_cov_56.754717_g73587_i0forward_frame_3 - 0.086 12.4 0.2 0.098 12.2 0.2 1.0 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase VID27 PF08553.10 NODE_81521_length_194_cov_67.660377_g73580_i0reverse_frame_2 - 0.011 14.8 0.1 0.011 14.8 0.1 1.1 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain DUF2633 PF11119.8 NODE_81521_length_194_cov_67.660377_g73580_i0forward_frame_3 - 0.00098 19.0 0.0 0.00098 19.0 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2633) Smim3 PF17307.2 NODE_81511_length_194_cov_94.352201_g73570_i0reverse_frame_2 - 0.0072 15.8 1.0 0.008 15.7 1.0 1.1 1 0 0 1 1 1 1 Small integral membrane protein 3 BBS2_C PF14782.6 NODE_81511_length_194_cov_94.352201_g73570_i0forward_frame_3 - 0.00017 20.5 0.1 0.00022 20.2 0.1 1.0 1 0 0 1 1 1 1 Ciliary BBSome complex subunit 2, C-terminal Toxin_31 PF08119.11 NODE_81509_length_194_cov_95.427673_g73568_i0forward_frame_3 - 0.043 13.6 0.3 0.067 13.0 0.3 1.3 1 0 0 1 1 1 0 Scorpion acidic alpha-KTx toxin family zf_PR_Knuckle PF18445.1 NODE_81508_length_194_cov_96.968553_g73567_i0forward_frame_3 - 0.78 9.6 3.1 1.1 9.1 3.1 1.4 1 0 0 1 1 1 0 PR zinc knuckle motif Pex2_Pex12 PF04757.14 NODE_81501_length_194_cov_127.522013_g73560_i0reverse_frame_2 - 0.042 13.4 0.1 0.044 13.4 0.1 1.0 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region DUF2759 PF10958.8 NODE_81501_length_194_cov_127.522013_g73560_i0forward_frame_2 - 0.092 12.5 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) DUP PF00674.18 NODE_81495_length_194_cov_168.886792_g73554_i0forward_frame_3 - 0.033 14.3 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 DUP family MTCP1 PF08991.10 NODE_81492_length_194_cov_227.566038_g73551_i0reverse_frame_3 - 0.031 14.5 0.7 0.039 14.2 0.7 1.1 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type PE_PPE_C PF12484.8 NODE_81485_length_194_cov_455.056604_g73544_i0reverse_frame_2 - 0.0081 17.1 0.3 0.011 16.7 0.3 1.1 1 0 0 1 1 1 1 Polymorphic PE/PPE proteins C terminal Ost5 PF05251.12 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_3 - 0.57 10.5 5.4 10 6.5 2.2 2.0 1 1 1 2 2 2 0 Oligosaccharyltransferase subunit 5 EpsG PF14897.6 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_3 - 0.66 9.2 9.0 0.85 8.9 9.0 1.2 1 0 0 1 1 1 0 EpsG family YajC PF02699.15 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_2 - 0.28 11.1 12.0 1.9 8.4 3.5 2.1 2 0 0 2 2 2 0 Preprotein translocase subunit SelK_SelG PF10961.8 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_2 - 2.5 8.8 5.3 1.7 9.3 0.1 2.0 1 1 1 2 2 2 0 Selenoprotein SelK_SelG OAD_gamma PF04277.13 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_2 - 4 8.1 5.9 8.7 7.0 0.3 2.0 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Response_reg PF00072.24 NODE_81475_length_195_cov_0.912500_g73534_i0reverse_frame_3 - 8.2e-12 45.3 0.0 9.3e-12 45.1 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain UPF0220 PF05255.11 NODE_81474_length_195_cov_0.912500_g73533_i0forward_frame_3 - 0.013 15.1 0.0 0.016 14.8 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) LtrA PF06772.11 NODE_81474_length_195_cov_0.912500_g73533_i0forward_frame_2 - 0.058 12.6 0.3 0.058 12.6 0.3 1.0 1 0 0 1 1 1 0 Bacterial low temperature requirement A protein (LtrA) EF-hand_1 PF00036.32 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.00082 18.8 0.4 0.0021 17.5 0.1 1.8 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.006 16.4 0.1 0.011 15.5 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.023 14.2 0.1 0.042 13.4 0.1 1.5 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.052 13.5 0.1 0.073 13.0 0.1 1.5 1 1 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.053 14.0 0.3 0.11 13.0 0.1 1.5 1 1 0 1 1 1 0 EF-hand domain pair DUF4597 PF15366.6 NODE_81469_length_195_cov_0.943750_g73528_i0forward_frame_2 - 0.13 12.1 1.9 0.15 11.8 1.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4597) C1_1 PF00130.22 NODE_81467_length_195_cov_0.950000_g73526_i0forward_frame_2 - 0.047 13.6 2.0 0.057 13.3 2.0 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Herpes_capsid PF06112.11 NODE_81463_length_195_cov_0.987500_g73522_i0forward_frame_2 - 0.35 10.9 1.8 0.36 10.9 1.8 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Orai-1 PF07856.12 NODE_81459_length_195_cov_0.987500_g73518_i0reverse_frame_3 - 0.042 13.5 0.1 0.045 13.4 0.1 1.0 1 0 0 1 1 1 0 Mediator of CRAC channel activity Hfx_Cass5 PF18287.1 NODE_81455_length_195_cov_0.993750_g73514_i0reverse_frame_3 - 0.097 12.9 0.6 0.14 12.4 0.6 1.2 1 0 0 1 1 1 0 Integron Cassette Protein Hfx_Cass5 Toxin_12 PF07740.12 NODE_81452_length_195_cov_0.993750_g73511_i0reverse_frame_2 - 0.037 14.7 3.6 0.058 14.1 3.6 1.3 1 0 0 1 1 1 0 Ion channel inhibitory toxin TPR_2 PF07719.17 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 3.9e-06 26.6 1.0 0.00019 21.3 0.4 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 6.6e-06 25.7 0.2 0.0007 19.3 0.2 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 3.6e-05 23.8 0.1 7.8e-05 22.8 0.0 1.6 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 8.3e-05 23.2 0.9 0.0001 22.8 0.9 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.00024 21.1 0.9 0.0018 18.4 0.2 2.2 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.00027 20.5 0.4 0.025 14.3 0.0 2.1 1 1 1 2 2 2 2 TPR repeat TPR_12 PF13424.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.00028 21.1 1.1 0.00042 20.6 1.2 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.00097 19.6 0.1 0.0016 18.9 0.1 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.001 19.7 1.1 0.3 12.0 0.3 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.0018 18.7 2.8 0.0029 18.1 0.2 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.0021 17.9 0.7 0.048 13.7 0.5 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat HemY_N PF07219.13 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.016 15.4 0.0 0.023 14.9 0.0 1.2 1 0 0 1 1 1 0 HemY protein N-terminus TPR_20 PF14561.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.018 15.4 0.1 0.19 12.1 0.0 1.9 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.03 14.2 0.6 0.084 12.8 0.2 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.031 14.5 0.1 0.038 14.2 0.1 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 PaREP1 PF05942.11 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.077 12.9 0.9 1.4 8.8 0.0 2.0 2 0 0 2 2 2 0 Archaeal PaREP1/PaREP8 family CRPA PF05745.11 NODE_81445_length_195_cov_0.993750_g73504_i0forward_frame_3 - 0.015 15.4 0.5 0.015 15.3 0.5 1.1 1 0 0 1 1 1 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) PGF-CTERM PF18204.1 NODE_81442_length_195_cov_1.000000_g73501_i0reverse_frame_2 - 0.95 9.5 4.6 1.5 8.9 4.6 1.4 1 0 0 1 1 1 0 PGF-CTERM motif DUF5474 PF17568.2 NODE_81442_length_195_cov_1.000000_g73501_i0forward_frame_2 - 0.14 12.2 0.1 0.17 12.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5474) Peptidase_C2 PF00648.21 NODE_81429_length_195_cov_1.000000_g73488_i0reverse_frame_3 - 0.0054 15.8 0.6 0.0061 15.6 0.6 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease E7 PF00527.18 NODE_81426_length_195_cov_1.000000_g73485_i0forward_frame_3 - 0.16 12.2 0.5 0.18 12.0 0.5 1.0 1 0 0 1 1 1 0 E7 protein, Early protein EamA PF00892.20 NODE_81420_length_195_cov_1.000000_g73479_i0forward_frame_3 - 6.7e-06 26.3 3.3 7.2e-06 26.2 3.3 1.0 1 0 0 1 1 1 1 EamA-like transporter family DUF4116 PF13475.6 NODE_81416_length_195_cov_1.000000_g73475_i0forward_frame_2 - 0.13 12.0 0.2 0.18 11.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) LRR_6 PF13516.6 NODE_81415_length_195_cov_1.000000_g73474_i0reverse_frame_2 - 6.6e-07 28.9 0.0 0.0049 16.8 0.0 2.2 2 0 0 2 2 2 2 Leucine Rich repeat LRR_4 PF12799.7 NODE_81415_length_195_cov_1.000000_g73474_i0reverse_frame_2 - 0.00025 21.4 2.3 0.08 13.4 0.3 1.8 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_81415_length_195_cov_1.000000_g73474_i0reverse_frame_2 - 0.014 15.1 0.4 0.12 12.2 0.4 2.0 1 1 1 2 2 2 0 Leucine rich repeat LRR_1 PF00560.33 NODE_81415_length_195_cov_1.000000_g73474_i0reverse_frame_2 - 0.027 15.0 0.1 1.2 10.0 0.0 2.2 2 0 0 2 2 2 0 Leucine Rich Repeat RhoGEF67_u2 PF16614.5 NODE_81411_length_195_cov_1.000000_g73470_i0reverse_frame_2 - 0.056 13.5 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 Unstructured region two on RhoGEF 6 and 7 DUF2887 PF11103.8 NODE_81405_length_195_cov_1.000000_g73464_i0forward_frame_3 - 0.025 14.6 0.1 0.026 14.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2887) RANK_CRD_2 PF18278.1 NODE_81400_length_195_cov_1.000000_g73459_i0forward_frame_3 - 0.082 13.1 0.1 0.14 12.4 0.1 1.4 1 0 0 1 1 1 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 TonB_N PF16031.5 NODE_81398_length_195_cov_1.000000_g73457_i0reverse_frame_2 - 0.011 16.2 3.4 0.013 16.1 3.4 1.1 1 0 0 1 1 1 0 TonB polyproline region zf-RING_4 PF14570.6 NODE_81391_length_195_cov_1.000000_g73450_i0forward_frame_2 - 0.0016 18.2 0.1 0.0019 17.9 0.1 1.1 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain DUF865 PF05906.11 NODE_81390_length_195_cov_1.000000_g73449_i0reverse_frame_2 - 0.38 10.6 0.2 0.38 10.6 0.2 2.1 2 1 0 2 2 2 0 Herpesvirus-7 repeat of unknown function (DUF865) SRR1 PF07985.12 NODE_81388_length_195_cov_1.000000_g73447_i0reverse_frame_3 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 SRR1 Med24_N PF11277.8 NODE_81387_length_195_cov_1.000000_g73446_i0reverse_frame_3 - 0.073 11.1 0.5 0.081 11.0 0.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 24 N-terminal DUF2852 PF11014.8 NODE_81387_length_195_cov_1.000000_g73446_i0forward_frame_3 - 0.033 14.3 0.0 0.04 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) Bd3614_N PF14442.6 NODE_81386_length_195_cov_1.000000_g73445_i0reverse_frame_3 - 0.17 12.2 0.0 0.19 12.0 0.0 1.0 1 0 0 1 1 1 0 Bd3614-like deaminase N-terminal TP2 PF01254.18 NODE_81382_length_195_cov_1.000000_g73441_i0forward_frame_2 - 0.17 12.5 4.9 0.2 12.3 4.9 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 DUF2389 PF09493.10 NODE_81372_length_195_cov_1.062500_g73431_i0reverse_frame_3 - 0.12 13.0 0.2 0.14 12.8 0.2 1.2 1 0 0 1 1 1 0 Tryptophan-rich protein (DUF2389) Mei5 PF10376.9 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 2.6e-05 24.2 3.7 2.6e-05 24.2 3.7 1.0 1 0 0 1 1 1 1 Double-strand recombination repair protein DUF1664 PF07889.12 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.00025 21.1 2.6 0.00026 21.0 2.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Phage_Mu_Gam PF07352.12 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.0041 17.0 1.0 0.0045 16.9 1.0 1.0 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein COG2 PF06148.11 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.0091 16.1 2.0 0.01 15.9 2.0 1.1 1 0 0 1 1 1 1 COG (conserved oligomeric Golgi) complex component, COG2 DUF5315 PF17242.2 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.011 15.6 0.2 0.012 15.4 0.2 1.1 1 0 0 1 1 1 0 Disordered region of unknown function (DUF5315) OmpH PF03938.14 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.011 16.1 2.6 0.011 16.0 2.6 1.0 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) KELK PF15796.5 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.04 14.4 5.7 0.18 12.3 5.7 1.8 1 1 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase IFT57 PF10498.9 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.099 11.6 5.3 0.1 11.5 5.3 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Fzo_mitofusin PF04799.13 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.1 12.1 2.3 0.096 12.2 1.6 1.3 1 1 0 1 1 1 0 fzo-like conserved region TMPIT PF07851.13 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 1.1 8.4 3.3 1.1 8.4 3.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein Paired_CXXCH_1 PF09699.10 NODE_81367_length_195_cov_1.112500_g73426_i0reverse_frame_2 - 0.057 13.2 0.0 0.09 12.5 0.0 1.4 1 0 0 1 1 1 0 Doubled CXXCH motif (Paired_CXXCH_1) Arginosuc_synth PF00764.19 NODE_81366_length_195_cov_1.112500_g73425_i0reverse_frame_3 - 1e-15 58.0 0.9 1.1e-15 57.9 0.9 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Regulator_TrmB PF11495.8 NODE_81366_length_195_cov_1.112500_g73425_i0reverse_frame_2 - 0.095 11.9 0.3 0.095 11.9 0.3 1.0 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB SLATT_6 PF18169.1 NODE_81366_length_195_cov_1.112500_g73425_i0forward_frame_3 - 0.026 14.2 0.3 0.026 14.2 0.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 Glyco_hydro_28 PF00295.17 NODE_81364_length_195_cov_1.118750_g73423_i0forward_frame_3 - 0.017 14.2 0.8 0.019 14.0 0.8 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 28 DUF3557 PF12078.8 NODE_81364_length_195_cov_1.118750_g73423_i0forward_frame_3 - 0.022 14.7 0.8 0.026 14.5 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3557) CLLAC PF15675.5 NODE_81362_length_195_cov_1.131250_g73421_i0reverse_frame_3 - 3 7.5 8.2 5 6.8 8.2 1.3 1 0 0 1 1 1 0 CLLAC-motif containing domain PKS_DE PF18369.1 NODE_81359_length_195_cov_1.150000_g73418_i0forward_frame_3 - 0.083 13.5 0.5 0.12 12.9 0.5 1.3 1 0 0 1 1 1 0 Polyketide synthase dimerisation element domain DUF4923 PF16270.5 NODE_81354_length_195_cov_1.175000_g73413_i0forward_frame_3 - 0.028 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Lipocalin-like domain (DUF4923) Complex1_LYR PF05347.15 NODE_81350_length_195_cov_1.187500_g73409_i0forward_frame_3 - 0.099 12.7 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Complex 1 protein (LYR family) Acyl-CoA_ox_N PF14749.6 NODE_81349_length_195_cov_1.187500_g73408_i0forward_frame_3 - 3.3e-06 27.7 0.0 3.6e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Acyl-CoA_dh_N PF02771.16 NODE_81349_length_195_cov_1.187500_g73408_i0forward_frame_3 - 0.025 15.2 0.0 0.028 15.1 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, N-terminal domain MIOX PF05153.15 NODE_81344_length_195_cov_1.212500_g73403_i0reverse_frame_3 - 1.5e-17 64.0 0.2 1.5e-17 64.0 0.2 1.0 1 0 0 1 1 1 1 Myo-inositol oxygenase Baculo_helicase PF04735.12 NODE_81338_length_195_cov_1.237500_g73397_i0reverse_frame_3 - 0.006 14.2 0.4 0.006 14.2 0.4 1.0 1 0 0 1 1 1 1 Baculovirus DNA helicase DUF3679 PF12438.8 NODE_81337_length_195_cov_1.243750_g73396_i0reverse_frame_3 - 1.2 8.9 0.1 1.2 8.9 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3679) CemA PF03040.14 NODE_81335_length_195_cov_1.243750_g73394_i0forward_frame_3 - 0.035 14.0 0.2 0.038 13.9 0.2 1.0 1 0 0 1 1 1 0 CemA family PET117 PF15786.5 NODE_81335_length_195_cov_1.243750_g73394_i0forward_frame_3 - 0.05 13.9 0.0 0.06 13.6 0.0 1.1 1 0 0 1 1 1 0 PET assembly of cytochrome c oxidase, mitochondrial CEP1-DNA_bind PF09287.10 NODE_81335_length_195_cov_1.243750_g73394_i0forward_frame_3 - 0.054 13.1 0.2 0.062 12.9 0.2 1.0 1 0 0 1 1 1 0 CEP-1, DNA binding Luciferase_cat PF10285.9 NODE_81332_length_195_cov_1.250000_g73391_i0reverse_frame_2 - 8.1 5.7 6.3 1.6 8.1 0.4 1.9 1 1 1 2 2 2 0 Luciferase catalytic domain GBP_repeat PF02526.14 NODE_81329_length_195_cov_1.250000_g73388_i0forward_frame_2 - 0.072 12.8 0.5 0.096 12.4 0.5 1.2 1 0 0 1 1 1 0 Glycophorin-binding protein Scaffolding_pro PF11418.8 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.0084 16.6 1.3 0.01 16.4 1.3 1.2 1 0 0 1 1 1 1 Phi29 scaffolding protein CENP-H PF05837.12 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.0096 16.3 5.7 0.01 16.2 5.7 1.0 1 0 0 1 1 1 1 Centromere protein H (CENP-H) DivIVA PF05103.13 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.014 15.5 6.4 0.014 15.5 6.4 1.3 1 1 0 1 1 1 0 DivIVA protein TolA_bind_tri PF16331.5 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.017 15.2 8.8 0.019 15.0 8.8 1.1 1 0 0 1 1 1 0 TolA binding protein trimerisation Imm5 PF14423.6 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.13 12.5 2.6 0.15 12.3 2.6 1.0 1 0 0 1 1 1 0 Immunity protein Imm5 FapA PF03961.13 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.58 8.7 7.9 0.62 8.6 7.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A KH_dom-like PF14714.6 NODE_81326_length_195_cov_1.262500_g73385_i0reverse_frame_3 - 0.17 12.2 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HTH_psq PF05225.16 NODE_81326_length_195_cov_1.262500_g73385_i0forward_frame_3 - 0.044 13.5 0.0 0.075 12.8 0.0 1.3 1 0 0 1 1 1 0 helix-turn-helix, Psq domain BCIP PF13862.6 NODE_81321_length_195_cov_1.287500_g73380_i0forward_frame_2 - 0.0036 17.1 0.1 0.0038 17.0 0.1 1.0 1 0 0 1 1 1 1 p21-C-terminal region-binding protein PAP1 PF08601.10 NODE_81319_length_195_cov_1.300000_g73378_i0forward_frame_3 - 0.02 14.6 1.1 0.021 14.6 1.1 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 Phage_BR0599 PF09356.10 NODE_81319_length_195_cov_1.300000_g73378_i0forward_frame_3 - 0.042 14.2 0.0 0.057 13.8 0.0 1.2 1 0 0 1 1 1 0 Phage conserved hypothetical protein BR0599 DUF473 PF04322.12 NODE_81314_length_195_cov_1.331250_g73373_i0forward_frame_3 - 0.028 14.3 0.1 0.03 14.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF473) GST_C PF00043.25 NODE_81311_length_195_cov_1.343750_g73370_i0forward_frame_2 - 0.07 13.4 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 NODE_81311_length_195_cov_1.343750_g73370_i0forward_frame_2 - 0.13 12.5 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GRAM PF02893.20 NODE_81303_length_195_cov_1.375000_g73362_i0reverse_frame_3 - 0.088 12.7 0.0 0.089 12.7 0.0 1.1 1 0 0 1 1 1 0 GRAM domain Sulfakinin PF08257.11 NODE_81299_length_195_cov_1.412500_g73358_i0reverse_frame_2 - 0.021 14.7 3.1 5 7.5 0.2 2.5 2 0 0 2 2 2 0 Sulfakinin family MRP-S33 PF08293.11 NODE_81295_length_195_cov_1.425000_g73354_i0reverse_frame_2 - 0.015 15.5 0.1 0.018 15.3 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit S27 Ribosomal_S5_C PF03719.15 NODE_81290_length_195_cov_1.437500_g73349_i0forward_frame_2 - 0.16 11.5 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S5, C-terminal domain DUF4322 PF14210.6 NODE_81284_length_195_cov_1.462500_g73343_i0reverse_frame_3 - 0.037 13.9 0.0 0.045 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) DUF1265 PF06887.14 NODE_81283_length_195_cov_1.462500_g73342_i0reverse_frame_2 - 0.05 13.6 1.6 0.06 13.3 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1265) VraX PF17412.2 NODE_81282_length_195_cov_1.462500_g73341_i0reverse_frame_3 - 0.064 12.9 0.0 0.095 12.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function XPC-binding PF09280.11 NODE_81282_length_195_cov_1.462500_g73341_i0forward_frame_2 - 6.6e-10 38.6 2.5 6.6e-10 38.6 2.5 1.4 2 0 0 2 2 2 1 XPC-binding domain Toxin_34 PF08396.10 NODE_81278_length_195_cov_1.468750_g73337_i0reverse_frame_2 - 0.0034 18.1 2.1 0.0036 18.0 2.1 1.1 1 0 0 1 1 1 1 Spider toxin omega agatoxin/Tx1 family ARL17 PF15840.5 NODE_81268_length_195_cov_1.493750_g73327_i0forward_frame_3 - 0.15 12.4 6.0 0.066 13.6 2.8 2.0 1 1 2 3 3 3 0 ADP-ribosylation factor-like protein 17 Rhomboid_N PF12122.8 NODE_81268_length_195_cov_1.493750_g73327_i0forward_frame_2 - 0.023 14.9 0.0 0.025 14.7 0.0 1.1 1 0 0 1 1 1 0 Cytoplasmic N-terminal domain of rhomboid serine protease DUF1819 PF08849.11 NODE_81265_length_195_cov_1.493750_g73324_i0forward_frame_2 - 0.045 13.6 0.0 0.052 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative inner membrane protein (DUF1819) Pex24p PF06398.11 NODE_81259_length_195_cov_1.500000_g73318_i0reverse_frame_3 - 0.41 9.6 4.3 0.45 9.5 4.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF334 PF03904.13 NODE_81258_length_195_cov_1.500000_g73317_i0forward_frame_3 - 0.067 12.7 0.6 0.073 12.6 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) Fur_reg_FbpB PF13040.6 NODE_81258_length_195_cov_1.500000_g73317_i0forward_frame_3 - 0.086 12.4 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Fur-regulated basic protein B CLU_N PF15044.6 NODE_81255_length_195_cov_1.500000_g73314_i0forward_frame_2 - 0.0082 16.5 0.3 0.011 16.1 0.3 1.2 1 0 0 1 1 1 1 Mitochondrial function, CLU-N-term Transp_inhibit PF18791.1 NODE_81252_length_195_cov_1.500000_g73311_i0reverse_frame_3 - 0.0043 16.5 0.1 0.0093 15.4 0.1 1.6 2 0 0 2 2 2 1 Transport inhibitor response 1 protein domain V_ATPase_I PF01496.19 NODE_81249_length_195_cov_1.500000_g73308_i0reverse_frame_2 - 0.00066 17.7 0.0 0.00067 17.7 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family LSM PF01423.22 NODE_81248_length_195_cov_1.500000_g73307_i0reverse_frame_2 - 0.042 13.5 0.0 0.16 11.7 0.0 1.7 1 1 1 2 2 2 0 LSM domain FAINT PF04385.15 NODE_81245_length_195_cov_1.506250_g73304_i0reverse_frame_2 - 0.037 14.1 1.6 0.041 13.9 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function, DUF529 IRK PF01007.20 NODE_81234_length_195_cov_1.550000_g73293_i0forward_frame_3 - 0.07 12.9 3.8 0.074 12.9 3.8 1.1 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain DUF2514 PF10721.9 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_3 - 0.05 13.6 3.5 0.054 13.5 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2514) DUF3915 PF13054.6 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_3 - 0.16 12.0 2.0 0.17 11.8 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) OATP PF03137.20 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_3 - 1.3 7.2 2.3 1.3 7.2 2.3 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Presenilin PF01080.17 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_3 - 3.2 6.4 4.3 3.4 6.3 4.3 1.0 1 0 0 1 1 1 0 Presenilin zf-C2H2_2 PF12756.7 NODE_81222_length_195_cov_1.643750_g73281_i0reverse_frame_2 - 0.33 11.3 2.5 0.8 10.1 2.5 1.6 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) DUF5118 PF17162.4 NODE_81218_length_195_cov_1.662500_g73277_i0forward_frame_3 - 0.096 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5118) CAP-ZIP_m PF15255.6 NODE_81208_length_195_cov_1.750000_g73267_i0reverse_frame_2 - 0.28 11.4 3.3 6.9 6.9 0.3 2.0 2 0 0 2 2 2 0 WASH complex subunit CAP-Z interacting, central region DUF1554 PF07588.11 NODE_81201_length_195_cov_1.781250_g73260_i0reverse_frame_2 - 0.0063 16.3 0.3 0.0063 16.3 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1554) DUF2963 PF11178.8 NODE_81198_length_195_cov_1.818750_g73257_i0reverse_frame_3 - 0.18 11.6 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) DUF3985 PF13153.6 NODE_81194_length_195_cov_1.843750_g73253_i0reverse_frame_3 - 0.0047 16.9 0.7 0.006 16.6 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3985) zf-Sec23_Sec24 PF04810.15 NODE_81193_length_195_cov_1.868750_g73252_i0reverse_frame_2 - 0.016 15.2 0.9 0.03 14.4 0.9 1.4 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger UPF0524 PF15823.5 NODE_81193_length_195_cov_1.868750_g73252_i0reverse_frame_2 - 0.87 8.9 3.5 1 8.7 3.5 1.1 1 0 0 1 1 1 0 UPF0524 of C3orf70 PRMT5_C PF17286.2 NODE_81193_length_195_cov_1.868750_g73252_i0forward_frame_3 - 0.076 12.9 0.0 0.08 12.8 0.0 1.1 1 0 0 1 1 1 0 PRMT5 oligomerisation domain RepA1_leader PF08048.12 NODE_81192_length_195_cov_1.868750_g73251_i0reverse_frame_3 - 0.04 14.2 1.6 0.06 13.6 1.6 1.3 1 0 0 1 1 1 0 Tap RepA1 leader peptide # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks391.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks391.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks391.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks391.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:30:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LepA_C PF06421.12 NODE_81191_length_195_cov_1.868750_g73250_i0reverse_frame_2 - 1.4e-22 79.8 0.1 1.6e-22 79.7 0.1 1.0 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus CompInhib_SCIN PF11546.8 NODE_81191_length_195_cov_1.868750_g73250_i0reverse_frame_2 - 0.061 13.4 0.0 0.066 13.3 0.0 1.2 1 0 0 1 1 1 0 Staphylococcal complement inhibitor SCIN ALF PF03752.13 NODE_81189_length_195_cov_1.875000_g73248_i0forward_frame_2 - 0.077 13.0 0.0 0.099 12.6 0.0 1.1 1 0 0 1 1 1 0 Short repeats of unknown function TPR_14 PF13428.6 NODE_81188_length_195_cov_1.875000_g73247_i0reverse_frame_3 - 0.0018 19.0 0.0 0.0023 18.6 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat Lentiviral_Tat PF02998.14 NODE_81184_length_195_cov_1.900000_g73243_i0forward_frame_2 - 0.038 14.0 0.1 0.041 13.9 0.1 1.1 1 0 0 1 1 1 0 Lentiviral Tat protein HSP20 PF00011.21 NODE_81182_length_195_cov_1.906250_g73241_i0forward_frame_3 - 0.21 11.8 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Hsp20/alpha crystallin family IGF2_C PF08365.11 NODE_81180_length_195_cov_1.918750_g73239_i0reverse_frame_3 - 0.014 15.4 0.2 0.015 15.3 0.2 1.2 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide IMUP PF15761.5 NODE_81177_length_195_cov_1.931250_g73236_i0forward_frame_3 - 0.3 11.8 12.8 0.36 11.5 12.8 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_81177_length_195_cov_1.931250_g73236_i0forward_frame_3 - 0.41 10.2 12.5 0.45 10.1 12.5 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF561 PF04481.12 NODE_81176_length_195_cov_1.931250_g73235_i0reverse_frame_3 - 0.15 11.2 0.0 0.16 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Bowman-Birk_leg PF00228.20 NODE_81176_length_195_cov_1.931250_g73235_i0reverse_frame_2 - 1 9.8 3.5 0.44 11.0 1.1 1.7 2 0 0 2 2 2 0 Bowman-Birk serine protease inhibitor family TAXi_N PF14543.6 NODE_81175_length_195_cov_1.931250_g73234_i0forward_frame_3 - 0.061 13.6 0.2 0.061 13.6 0.2 1.0 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal Arteri_env PF01606.16 NODE_81171_length_195_cov_1.962500_g73230_i0forward_frame_2 - 0.095 12.6 0.0 0.095 12.6 0.0 1.0 1 0 0 1 1 1 0 Arterivirus envelope protein STG PF15809.5 NODE_81169_length_195_cov_1.968750_g73228_i0reverse_frame_2 - 0.049 13.7 0.0 0.049 13.7 0.0 1.0 1 0 0 1 1 1 0 Simian taste bud-specific gene product family HATPase_c PF02518.26 NODE_81169_length_195_cov_1.968750_g73228_i0forward_frame_2 - 0.034 14.6 0.0 0.041 14.4 0.0 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1574 PF07611.11 NODE_81168_length_195_cov_1.968750_g73227_i0forward_frame_2 - 0.03 13.7 0.2 0.032 13.6 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1574) PEP-utilizers PF00391.23 NODE_81157_length_195_cov_2.000000_g73216_i0forward_frame_2 - 0.004 16.9 0.6 0.16 11.7 0.6 2.0 1 1 0 1 1 1 1 PEP-utilising enzyme, mobile domain Glyoxalase_5 PF14696.6 NODE_81157_length_195_cov_2.000000_g73216_i0forward_frame_2 - 0.1 12.7 0.0 0.11 12.6 0.0 1.0 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Oxygenase-NA PF09859.9 NODE_81155_length_195_cov_2.000000_g73214_i0reverse_frame_3 - 0.041 13.4 0.1 0.043 13.3 0.1 1.1 1 0 0 1 1 1 0 Oxygenase, catalysing oxidative methylation of damaged DNA 2-Hacid_dh PF00389.30 NODE_81154_length_195_cov_2.000000_g73213_i0forward_frame_2 - 1.9e-10 40.5 0.1 2e-10 40.4 0.1 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Chlam_PMP PF02415.17 NODE_81148_length_195_cov_2.037500_g73207_i0reverse_frame_2 - 0.0026 18.1 9.5 0.054 14.0 0.7 2.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ribosomal_L34 PF00468.17 NODE_81140_length_195_cov_2.112500_g73199_i0reverse_frame_3 - 0.052 13.5 0.2 0.052 13.5 0.2 1.8 2 0 0 2 2 2 0 Ribosomal protein L34 Glyco_hydro_31 PF01055.26 NODE_81139_length_195_cov_2.125000_g73198_i0forward_frame_2 - 6.6e-20 71.7 0.1 6.8e-20 71.7 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 TnsD PF15978.5 NODE_81137_length_195_cov_2.162500_g73196_i0forward_frame_3 - 0.0061 15.6 0.1 0.0071 15.4 0.1 1.0 1 0 0 1 1 1 1 Tn7-like transposition protein D ECM1 PF05782.11 NODE_81134_length_195_cov_2.175000_g73193_i0reverse_frame_3 - 0.19 10.6 0.0 0.21 10.5 0.0 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) KCT2 PF17818.1 NODE_81133_length_195_cov_2.175000_g73192_i0reverse_frame_2 - 0.044 13.9 3.8 0.048 13.8 3.8 1.0 1 0 0 1 1 1 0 Keratinocyte-associated gene product SpdB PF05122.13 NODE_81130_length_195_cov_2.187500_g73189_i0reverse_frame_3 - 0.16 12.1 0.2 0.25 11.5 0.2 1.2 1 0 0 1 1 1 0 Mobile element transfer protein SAM_MT PF04445.13 NODE_81128_length_195_cov_2.231250_g73187_i0reverse_frame_2 - 0.2 11.0 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase Aldedh PF00171.22 NODE_81127_length_195_cov_2.237500_g73186_i0reverse_frame_3 - 3.9e-12 45.4 0.0 4.1e-12 45.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family baeRF_family2 PF18844.1 NODE_81127_length_195_cov_2.237500_g73186_i0reverse_frame_3 - 0.061 13.4 0.1 0.073 13.1 0.1 1.0 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 adh_short PF00106.25 NODE_81125_length_195_cov_2.275000_g73184_i0forward_frame_2 - 0.0037 16.7 0.0 0.0039 16.7 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase TehB PF03848.14 NODE_81125_length_195_cov_2.275000_g73184_i0forward_frame_2 - 0.0064 15.9 0.0 0.0066 15.9 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB adh_short_C2 PF13561.6 NODE_81125_length_195_cov_2.275000_g73184_i0forward_frame_2 - 0.034 13.7 0.0 0.036 13.6 0.0 1.0 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Sacchrp_dh_NADP PF03435.18 NODE_81125_length_195_cov_2.275000_g73184_i0forward_frame_2 - 0.087 13.1 0.0 0.1 12.8 0.0 1.0 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain TFIIE_beta PF02186.15 NODE_81118_length_195_cov_2.356250_g73177_i0reverse_frame_3 - 0.042 14.1 0.1 0.047 14.0 0.1 1.1 1 0 0 1 1 1 0 TFIIE beta subunit core domain DNA_pol3_theta PF06440.11 NODE_81118_length_195_cov_2.356250_g73177_i0reverse_frame_3 - 0.047 13.4 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase III, theta subunit EptA_B_N PF08019.12 NODE_81118_length_195_cov_2.356250_g73177_i0forward_frame_3 - 0.029 14.2 0.8 0.034 14.0 0.8 1.1 1 0 0 1 1 1 0 Phosphoethanolamine transferase EptA/EptB RE_BsaWI PF18643.1 NODE_81117_length_195_cov_2.387500_g73176_i0reverse_frame_3 - 0.035 14.0 0.4 0.042 13.8 0.4 1.2 1 0 0 1 1 1 0 BsaWI restriction endonuclease type 2 DHHC PF01529.20 NODE_81115_length_195_cov_2.443750_g73174_i0forward_frame_3 - 7.1e-05 22.9 0.3 8.5e-05 22.7 0.3 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase Phage_FRD3 PF05798.11 NODE_81106_length_195_cov_2.668750_g73165_i0forward_frame_3 - 0.13 12.6 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage FRD3 protein ATP-synt_8 PF00895.20 NODE_81104_length_195_cov_2.675000_g73163_i0forward_frame_2 - 0.65 10.5 5.0 1.3 9.5 0.9 2.1 1 1 1 2 2 2 0 ATP synthase protein 8 Mononeg_mRNAcap PF14318.6 NODE_81103_length_195_cov_2.675000_g73162_i0reverse_frame_3 - 0.053 12.8 0.1 0.057 12.7 0.1 1.0 1 0 0 1 1 1 0 Mononegavirales mRNA-capping region V Omega_Repress PF07764.11 NODE_81103_length_195_cov_2.675000_g73162_i0reverse_frame_3 - 0.12 13.0 0.1 5 7.8 0.0 2.0 2 0 0 2 2 2 0 Omega Transcriptional Repressor ADH_N PF08240.12 NODE_81102_length_195_cov_2.687500_g73161_i0forward_frame_2 - 2.6e-15 56.2 0.2 2.8e-15 56.2 0.2 1.0 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain TOBE_2 PF08402.10 NODE_81102_length_195_cov_2.687500_g73161_i0forward_frame_2 - 0.046 13.9 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 TOBE domain Sugar_tr PF00083.24 NODE_81099_length_195_cov_2.718750_g73158_i0forward_frame_2 - 7.2e-14 51.5 1.8 7.9e-14 51.4 1.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_81099_length_195_cov_2.718750_g73158_i0forward_frame_2 - 3.7e-06 26.1 0.7 4.5e-06 25.8 0.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sec23_trunk PF04811.15 NODE_81097_length_195_cov_2.750000_g73156_i0reverse_frame_2 - 0.03 13.9 0.3 0.034 13.7 0.3 1.0 1 0 0 1 1 1 0 Sec23/Sec24 trunk domain DUF4718 PF15842.5 NODE_81097_length_195_cov_2.750000_g73156_i0reverse_frame_2 - 0.099 12.4 0.5 0.11 12.2 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) SSF PF00474.17 NODE_81093_length_195_cov_2.975000_g73152_i0forward_frame_3 - 5e-15 55.3 0.0 5.2e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Sodium:solute symporter family Peptidase_C2 PF00648.21 NODE_81092_length_195_cov_3.037500_g73151_i0forward_frame_3 - 1.5e-10 40.6 0.0 1.7e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Peptidase_C47 PF05543.13 NODE_81092_length_195_cov_3.037500_g73151_i0forward_frame_3 - 0.11 12.0 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Staphopain peptidase C47 KIP1 PF07765.12 NODE_81088_length_195_cov_3.212500_g73147_i0reverse_frame_3 - 0.14 12.3 0.2 0.18 12.0 0.2 1.2 1 0 0 1 1 1 0 KIP1-like protein Lamprin PF06403.11 NODE_81087_length_195_cov_3.225000_g73146_i0forward_frame_2 - 0.005 16.8 2.1 0.0054 16.7 2.1 1.1 1 0 0 1 1 1 1 Lamprin Keratin_2_head PF16208.5 NODE_81087_length_195_cov_3.225000_g73146_i0forward_frame_2 - 0.068 13.3 5.9 0.065 13.4 5.9 1.0 1 0 0 1 1 1 0 Keratin type II head Mab-21 PF03281.14 NODE_81086_length_195_cov_3.281250_g73145_i0reverse_frame_2 - 0.017 14.4 0.4 0.019 14.3 0.4 1.0 1 0 0 1 1 1 0 Mab-21 protein Imm27 PF15590.6 NODE_81086_length_195_cov_3.281250_g73145_i0reverse_frame_2 - 0.03 14.1 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 27 BPD_transp_1 PF00528.22 NODE_81086_length_195_cov_3.281250_g73145_i0forward_frame_2 - 6.2e-11 42.4 0.1 6.5e-11 42.3 0.1 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component MR_MLE_C PF13378.6 NODE_81082_length_195_cov_3.662500_g73141_i0reverse_frame_2 - 6.9e-07 29.1 0.0 8.4e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MORN PF02493.20 NODE_81078_length_195_cov_4.275000_g73137_i0reverse_frame_2 - 1.3e-08 34.2 18.1 6.5e-06 25.7 0.3 4.0 4 0 0 4 4 4 3 MORN repeat Transposase_22 PF02994.14 NODE_81076_length_195_cov_5.837500_g73135_i0reverse_frame_2 - 0.11 12.7 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 L1 transposable element RBD-like domain Glyco_transf_28 PF03033.20 NODE_81074_length_195_cov_7.212500_g73133_i0forward_frame_3 - 0.14 12.1 0.0 0.15 12.1 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain PIP49_C PF12260.8 NODE_81072_length_195_cov_10.868750_g73131_i0reverse_frame_3 - 0.055 13.1 0.5 0.067 12.8 0.5 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 PCMT PF01135.19 NODE_81069_length_195_cov_15.393750_g73128_i0reverse_frame_3 - 0.049 13.4 0.0 0.053 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF3011 PF11218.8 NODE_81068_length_195_cov_17.768750_g73127_i0forward_frame_3 - 0.02 14.9 3.7 0.021 14.8 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3011) TPR_11 PF13414.6 NODE_81064_length_195_cov_26.012500_g73123_i0forward_frame_3 - 0.032 13.9 0.0 0.045 13.4 0.0 1.3 1 0 0 1 1 1 0 TPR repeat Cnn_1N PF07989.11 NODE_81062_length_195_cov_28.150000_g73121_i0reverse_frame_2 - 0.037 14.2 6.3 0.04 14.1 6.3 1.1 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 TBD PF12845.7 NODE_81060_length_195_cov_30.031250_g73119_i0reverse_frame_2 - 0.092 12.6 0.5 0.092 12.6 0.5 1.6 1 1 1 2 2 2 0 TBD domain DUF2373 PF10180.9 NODE_81056_length_195_cov_35.368750_g73115_i0forward_frame_3 - 0.0022 17.8 0.0 0.003 17.4 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2373) DUF1479 PF07350.12 NODE_81056_length_195_cov_35.368750_g73115_i0forward_frame_2 - 0.061 12.1 0.0 0.069 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) YozE_SAM_like PF06855.12 NODE_81050_length_195_cov_39.206250_g73109_i0reverse_frame_2 - 0.017 15.3 0.1 0.017 15.3 0.1 1.1 1 0 0 1 1 1 0 YozE SAM-like fold Ykof PF07615.11 NODE_81043_length_195_cov_43.056250_g73102_i0forward_frame_2 - 0.056 13.9 0.4 0.064 13.7 0.4 1.1 1 0 0 1 1 1 0 YKOF-related Family TTL PF03133.15 NODE_81041_length_195_cov_44.306250_g73100_i0reverse_frame_2 - 9.7e-07 28.2 0.0 1e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family GSH-S_ATP PF02955.16 NODE_81041_length_195_cov_44.306250_g73100_i0reverse_frame_2 - 0.0065 15.9 0.1 0.0067 15.9 0.1 1.0 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain PIG-H PF10181.9 NODE_81041_length_195_cov_44.306250_g73100_i0forward_frame_3 - 0.027 14.3 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 GPI-GlcNAc transferase complex, PIG-H component zf-UBP_var PF17807.1 NODE_81039_length_195_cov_46.268750_g73098_i0forward_frame_3 - 0.0093 15.7 1.3 0.027 14.2 0.9 1.8 1 1 1 2 2 2 1 Variant UBP zinc finger Peptidase_M17 PF00883.21 NODE_81028_length_195_cov_59.656250_g73087_i0reverse_frame_2 - 0.00078 18.8 0.0 0.0009 18.6 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Herpes_UL37_2 PF07413.11 NODE_81027_length_195_cov_59.850000_g73086_i0reverse_frame_2 - 0.07 12.3 0.0 0.071 12.3 0.0 1.0 1 0 0 1 1 1 0 Betaherpesvirus immediate-early glycoprotein UL37 RF-1 PF00472.20 NODE_81026_length_195_cov_60.006250_g73085_i0reverse_frame_3 - 0.031 14.2 0.0 0.033 14.1 0.0 1.1 1 0 0 1 1 1 0 RF-1 domain OATP PF03137.20 NODE_81025_length_195_cov_61.112500_g73084_i0reverse_frame_2 - 0.24 9.6 2.8 0.24 9.7 2.8 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family UL11 PF11094.8 NODE_81022_length_195_cov_63.118750_g73081_i0reverse_frame_2 - 0.004 17.0 0.2 0.0052 16.6 0.2 1.2 1 0 0 1 1 1 1 Membrane-associated tegument protein TPIP1 PF15338.6 NODE_81022_length_195_cov_63.118750_g73081_i0forward_frame_3 - 0.0094 16.0 0.1 0.0097 16.0 0.1 1.0 1 0 0 1 1 1 1 p53-regulated apoptosis-inducing protein 1 KASH PF10541.9 NODE_81012_length_195_cov_90.681250_g73071_i0reverse_frame_2 - 0.0034 17.6 0.2 0.0056 16.9 0.2 1.3 1 0 0 1 1 1 1 Nuclear envelope localisation domain SsgA PF04686.12 NODE_81008_length_195_cov_99.218750_g73067_i0forward_frame_3 - 0.023 14.7 0.0 0.025 14.6 0.0 1.1 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA DUF131 PF01998.17 NODE_81007_length_195_cov_102.537500_g73066_i0forward_frame_3 - 0.21 11.2 0.2 0.33 10.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF131 AstB PF04996.12 NODE_81006_length_195_cov_110.906250_g73065_i0reverse_frame_3 - 0.17 10.5 0.0 0.19 10.4 0.0 1.0 1 0 0 1 1 1 0 Succinylarginine dihydrolase zf-C3HC4_2 PF13923.6 NODE_81000_length_195_cov_144.768750_g73059_i0forward_frame_3 - 0.0013 18.5 0.8 0.002 17.9 0.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_81000_length_195_cov_144.768750_g73059_i0forward_frame_3 - 0.0063 16.4 0.5 0.0083 16.0 0.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_81000_length_195_cov_144.768750_g73059_i0forward_frame_3 - 0.047 13.6 5.8 0.059 13.2 5.8 1.4 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 TSGP1 PF07771.11 NODE_80998_length_195_cov_164.793750_g73057_i0reverse_frame_3 - 0.051 13.7 0.2 0.051 13.7 0.2 1.8 1 1 1 2 2 2 0 Tick salivary peptide group 1 Inhibitor_Mig-6 PF11555.8 NODE_80997_length_195_cov_187.006250_g73056_i0reverse_frame_3 - 0.017 15.2 0.1 0.02 15.0 0.1 1.2 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 DUF4710 PF15828.5 NODE_80993_length_195_cov_261.968750_g73052_i0reverse_frame_2 - 0.00022 21.2 3.5 0.00029 20.9 3.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4710) YMF19 PF02326.15 NODE_80993_length_195_cov_261.968750_g73052_i0forward_frame_3 - 0.15 12.8 6.9 0.19 12.5 6.9 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 DUF515 PF04415.12 ORF99909 - 2.5 6.4 5.9 2.6 6.3 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Ski_Sno PF02437.17 ORF99474 - 0.0046 16.7 1.7 0.0057 16.4 1.7 1.2 1 0 0 1 1 1 1 SKI/SNO/DAC family zf-TRAF PF02176.18 ORF99474 - 0.27 12.0 13.1 0.052 14.2 8.4 1.9 1 1 1 2 2 2 0 TRAF-type zinc finger Integrase_H2C2 PF17921.1 ORF99474 - 0.43 10.7 11.0 0.14 12.3 4.4 2.1 1 1 1 2 2 2 0 Integrase zinc binding domain zinc_ribbon_12 PF11331.8 ORF99474 - 0.73 9.7 4.5 1.4 8.8 4.5 1.5 1 0 0 1 1 1 0 Probable zinc-ribbon domain zf-BED PF02892.15 ORF99474 - 0.97 9.5 9.1 2 8.5 6.9 2.1 1 1 1 2 2 2 0 BED zinc finger zf-C2H2_4 PF13894.6 ORF99474 - 6.2 8.0 12.0 4.4 8.4 2.8 2.7 2 1 0 2 2 2 0 C2H2-type zinc finger Metallophos PF00149.28 ORF9947 - 0.00078 20.0 0.0 0.00082 19.9 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PUF PF00806.19 ORF99394 - 3.2e-09 36.0 0.3 5.2e-09 35.3 0.3 1.4 1 0 0 1 1 1 1 Pumilio-family RNA binding repeat PDE6_gamma PF04868.12 ORF98918 - 6 7.2 8.3 7 7.0 8.3 1.1 1 0 0 1 1 1 0 Retinal cGMP phosphodiesterase, gamma subunit PQQ PF01011.21 ORF98878 - 0.21 11.6 1.7 2.5 8.2 1.1 2.4 2 0 0 2 2 2 0 PQQ enzyme repeat Pro_sub2 PF18513.1 ORF98822 - 0.06 13.5 0.8 0.063 13.5 0.8 1.1 1 0 0 1 1 1 0 Prodomain subtilisin 2 X PF00739.19 ORF98657 - 0.22 11.6 4.0 0.23 11.6 4.0 1.2 1 0 0 1 1 1 0 Trans-activation protein X DUF1815 PF08844.10 ORF98307 - 0.047 13.7 0.3 0.056 13.4 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) Thioredoxin_4 PF13462.6 ORF98263 - 0.0032 17.7 0.0 0.0036 17.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF98263 - 0.033 14.0 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Herpes_PAP PF03325.13 ORF98263 - 0.13 11.8 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus polymerase accessory protein DUF3638 PF12340.8 ORF9812 - 0.068 12.5 0.1 0.072 12.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3638) FAD_binding_7 PF03441.14 ORF98098 - 0.035 13.6 0.0 0.039 13.4 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain of DNA photolyase ST7 PF04184.12 ORF98083 - 0.07 11.6 0.1 0.073 11.5 0.1 1.0 1 0 0 1 1 1 0 ST7 protein Hs1pro-1_N PF07231.12 ORF97651 - 0.099 12.4 0.1 0.1 12.4 0.1 1.0 1 0 0 1 1 1 0 Hs1pro-1 N-terminus Glucokinase PF02685.16 ORF97359 - 6e-09 35.3 0.1 6.4e-09 35.2 0.1 1.0 1 0 0 1 1 1 1 Glucokinase Dynamitin PF04912.14 ORF97024 - 0.015 14.7 0.1 0.016 14.6 0.1 1.1 1 0 0 1 1 1 0 Dynamitin Phasin PF05597.11 ORF97024 - 0.06 13.3 0.5 0.07 13.1 0.5 1.1 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) YPEB PF14620.6 ORF96457 - 0.11 11.8 3.4 0.11 11.8 3.4 1.0 1 0 0 1 1 1 0 YpeB sporulation TMPIT PF07851.13 ORF96457 - 1.4 8.1 4.6 1.5 8.0 4.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein Neurensin PF14927.6 ORF94949 - 0.11 12.2 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Neurensin ABC_membrane PF00664.23 ORF9492 - 0.0015 18.2 0.0 0.0016 18.2 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF2083 PF09856.9 ORF9492 - 0.063 13.1 0.0 0.069 13.0 0.0 1.0 1 0 0 1 1 1 0 Predicted transcriptional regulator (DUF2083) CARD PF00619.21 ORF94322 - 0.033 14.2 0.0 0.04 14.0 0.0 1.1 1 0 0 1 1 1 0 Caspase recruitment domain APS_kinase PF01583.20 ORF94322 - 0.1 12.5 0.1 0.11 12.3 0.1 1.0 1 0 0 1 1 1 0 Adenylylsulphate kinase bZIP_1 PF00170.21 ORF94254 - 7.6e-07 29.1 6.7 1e-06 28.7 6.7 1.2 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF94254 - 0.00055 20.0 8.5 0.001 19.1 7.7 1.7 1 1 1 2 2 2 1 Basic region leucine zipper SlyX PF04102.12 ORF94254 - 0.00082 19.9 0.5 0.001 19.6 0.5 1.2 1 0 0 1 1 1 1 SlyX ABC_tran_CTD PF16326.5 ORF94254 - 0.0011 19.2 2.7 0.0013 18.9 2.7 1.1 1 0 0 1 1 1 1 ABC transporter C-terminal domain RasGAP_C PF03836.15 ORF94254 - 0.0089 16.2 2.5 0.0094 16.1 2.5 1.0 1 0 0 1 1 1 1 RasGAP C-terminus COG5 PF10392.9 ORF94254 - 0.0095 16.1 0.5 0.0095 16.1 0.5 1.0 1 0 0 1 1 1 1 Golgi transport complex subunit 5 PI3K_P85_iSH2 PF16454.5 ORF94254 - 0.012 15.2 3.6 0.013 15.1 3.6 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF16 PF01519.16 ORF94254 - 0.015 15.8 2.5 0.018 15.6 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 Sod_Fe_N PF00081.22 ORF94254 - 0.018 15.5 0.2 0.027 15.0 0.2 1.3 1 1 0 1 1 1 0 Iron/manganese superoxide dismutases, alpha-hairpin domain Surfac_D-trimer PF09006.11 ORF94254 - 0.024 14.5 0.0 0.038 13.9 0.0 1.5 1 1 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation DUF5595 PF18077.1 ORF94254 - 0.043 13.9 1.4 0.063 13.4 1.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5595) Ax_dynein_light PF10211.9 ORF94254 - 0.047 13.6 4.2 0.051 13.5 4.2 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain BRE1 PF08647.11 ORF94254 - 0.048 13.7 6.6 0.054 13.6 6.6 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase DUF3450 PF11932.8 ORF94254 - 0.049 12.9 3.4 0.057 12.7 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Arm-DNA-bind_5 PF17293.2 ORF94254 - 0.075 13.5 5.1 0.12 12.8 5.1 1.5 1 1 0 1 1 1 0 Arm DNA-binding domain Mto2_bdg PF12808.7 ORF94254 - 0.076 13.3 5.7 0.06 13.7 4.3 1.5 1 1 0 1 1 1 0 Micro-tubular organiser Mto1 C-term Mto2-binding region XhlA PF10779.9 ORF94254 - 0.17 12.1 5.0 0.27 11.5 5.0 1.3 1 1 0 1 1 1 0 Haemolysin XhlA GrpE PF01025.19 ORF94254 - 0.18 11.5 4.8 0.19 11.4 4.8 1.0 1 0 0 1 1 1 0 GrpE DUF4140 PF13600.6 ORF94254 - 0.22 12.0 3.2 0.28 11.6 3.2 1.1 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Atg14 PF10186.9 ORF94254 - 0.3 10.1 5.8 0.33 10.0 5.8 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1192 PF06698.11 ORF94254 - 9.9 6.3 8.7 0.86 9.7 1.8 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1192) Ssl1 PF04056.14 ORF93843 - 0.031 14.1 0.2 0.033 14.0 0.2 1.1 1 0 0 1 1 1 0 Ssl1-like DUF588 PF04535.12 ORF93712 - 0.0074 16.1 2.2 0.0078 16.0 2.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF588) DUF4227 PF14004.6 ORF93712 - 5.1 7.1 5.9 0.52 10.3 1.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) Beta-TrCP_D PF12125.8 ORF93603 - 0.025 14.5 0.4 0.037 13.9 0.4 1.2 1 0 0 1 1 1 0 D domain of beta-TrCP MMADHC PF10229.9 ORF93509 - 0.016 14.9 0.0 0.02 14.7 0.0 1.0 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein Bunya_NS-S PF01104.17 ORF93055 - 0.083 12.7 5.1 0.086 12.7 5.1 1.3 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s Linker_histone PF00538.19 ORF92891 - 0.14 12.5 0.1 0.17 12.2 0.1 1.1 1 0 0 1 1 1 0 linker histone H1 and H5 family DHHC PF01529.20 ORF92793 - 0.00047 20.3 1.8 0.00047 20.3 1.8 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase Asp4 PF16996.5 ORF92717 - 0.0073 16.1 0.2 3 7.7 0.0 2.2 2 0 0 2 2 2 2 Accessory secretory protein Sec Asp4 Cnd2 PF05786.14 ORF9235 - 0.3 9.7 0.6 0.3 9.7 0.6 1.0 1 0 0 1 1 1 0 Condensin complex subunit 2 Tmemb_55A PF09788.9 ORF91688 - 0.015 14.4 0.1 0.015 14.4 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 55A DUF2254 PF10011.9 ORF91499 - 0.26 10.1 1.3 0.33 9.7 1.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) FlgM PF04316.13 ORF91182 - 0.0045 17.3 0.0 0.007 16.7 0.0 1.4 1 0 0 1 1 1 1 Anti-sigma-28 factor, FlgM Perilipin PF03036.16 ORF91182 - 0.007 15.4 0.5 0.0075 15.3 0.5 1.0 1 0 0 1 1 1 1 Perilipin family DUF4041 PF13250.6 ORF91182 - 0.018 14.9 2.1 0.74 9.7 0.9 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4041) Tox-REase-2 PF15646.6 ORF91182 - 0.045 13.9 0.3 0.048 13.9 0.3 1.0 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 Linker_histone PF00538.19 ORF90386 - 0.14 12.5 0.1 0.17 12.2 0.1 1.1 1 0 0 1 1 1 0 linker histone H1 and H5 family UBM PF14377.6 ORF89422 - 0.026 13.9 0.5 0.42 10.1 0.0 2.2 2 0 0 2 2 2 0 Ubiquitin binding region DUF5545 PF17699.1 ORF89231 - 0.025 14.4 1.3 0.028 14.3 1.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5545) MreD PF04093.12 ORF89118 - 0.0084 16.2 3.1 0.0092 16.1 3.1 1.0 1 0 0 1 1 1 1 rod shape-determining protein MreD ACT_3 PF10000.9 ORF88834 - 0.097 12.6 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 ACT domain Vps16_C PF04840.12 ORF88718 - 0.031 13.3 0.0 0.031 13.3 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region AreA_N PF07573.11 ORF88268 - 0.035 14.7 0.2 0.042 14.5 0.2 1.1 1 0 0 1 1 1 0 Nitrogen regulatory protein AreA N terminus Adeno_E3A PF05248.12 ORF88069 - 0.028 14.4 0.2 0.033 14.2 0.2 1.2 1 0 0 1 1 1 0 Adenovirus E3A PP2C_2 PF13672.6 ORF87854 - 0.031 13.9 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein phosphatase 2C PTS_EIIB PF00367.20 ORF87854 - 0.19 11.3 0.3 0.19 11.3 0.3 1.8 2 0 0 2 2 2 0 phosphotransferase system, EIIB Asp4 PF16996.5 ORF87701 - 0.0073 16.1 0.2 3 7.7 0.0 2.2 2 0 0 2 2 2 2 Accessory secretory protein Sec Asp4 DUF1700 PF08006.11 ORF87144 - 1.2 8.6 3.0 1.2 8.6 3.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF496 PF04363.12 ORF86715 - 0.048 13.7 4.2 0.053 13.6 4.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF496) Roc PF08477.13 ORF86611 - 1.2e-07 31.9 0.0 1.6e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF86611 - 4e-07 29.8 0.1 4.8e-07 29.5 0.1 1.1 1 0 0 1 1 1 1 Ras family AAA_7 PF12775.7 ORF86611 - 0.0007 19.2 0.0 0.00075 19.1 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_22 PF13401.6 ORF86611 - 0.02 15.2 0.0 0.023 15.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF86611 - 0.023 14.4 0.0 0.026 14.3 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF86611 - 0.03 14.7 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 ORF86611 - 0.031 14.3 0.0 0.031 14.3 0.0 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_5 PF07728.14 ORF86611 - 0.046 13.7 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TniB PF05621.11 ORF86611 - 0.052 13.0 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein AAA_24 PF13479.6 ORF86611 - 0.082 12.6 0.0 0.097 12.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain Arf PF00025.21 ORF86611 - 0.12 11.8 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family SRPRB PF09439.10 ORF86611 - 0.13 11.7 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit DUF1351 PF07083.11 ORF86379 - 0.05 13.4 0.1 0.058 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1351) FIIND PF13553.6 ORF86150 - 0.088 12.2 0.0 0.099 12.0 0.0 1.0 1 0 0 1 1 1 0 Function to find DUF4311 PF14188.6 ORF86127 - 0.067 13.0 0.1 0.071 12.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4311) TB PF00683.17 ORF86100 - 1.3 8.8 8.6 0.7 9.7 6.5 1.7 1 1 0 1 1 1 0 TB domain Spindle_Spc25 PF08234.12 ORF86052 - 0.073 13.3 1.1 0.21 11.8 0.1 1.9 1 1 1 2 2 2 0 Chromosome segregation protein Spc25 SmpA_OmlA PF04355.13 ORF86052 - 0.12 12.2 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 SmpA / OmlA family Asp4 PF16996.5 ORF85915 - 0.0073 16.1 0.2 3 7.7 0.0 2.2 2 0 0 2 2 2 2 Accessory secretory protein Sec Asp4 Vps16_C PF04840.12 ORF85809 - 0.031 13.3 0.0 0.031 13.3 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region DUF2208 PF09973.9 ORF85632 - 0.074 12.7 4.7 0.07 12.7 4.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) DUF2859 PF11072.8 ORF85058 - 0.086 12.6 0.0 0.089 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) FIIND PF13553.6 ORF84999 - 0.088 12.2 0.0 0.099 12.0 0.0 1.0 1 0 0 1 1 1 0 Function to find CAP_N PF01213.19 ORF84741 - 4 6.8 4.9 3.8 6.9 4.9 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal AAA_21 PF13304.6 ORF84539 - 6.2e-07 29.5 0.0 7.7e-07 29.2 0.0 1.0 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 ORF84539 - 0.04 14.1 0.0 0.14 12.4 0.0 1.7 1 1 1 2 2 2 0 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF84539 - 0.08 12.4 0.0 0.08 12.4 0.0 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Tmemb_55A PF09788.9 ORF84487 - 0.015 14.4 0.1 0.015 14.4 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 55A Myosin_TH1 PF06017.13 ORF84481 - 3e-06 27.0 0.9 3e-06 27.0 0.9 1.0 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding TB PF00683.17 ORF83792 - 1.3 8.8 8.6 0.7 9.7 6.5 1.7 1 1 0 1 1 1 0 TB domain FAM216B PF15107.6 ORF83597 - 0.12 12.2 0.1 0.14 12.1 0.1 1.1 1 0 0 1 1 1 0 FAM216B protein family DUF3290 PF11694.8 ORF83597 - 0.13 12.2 0.5 0.18 11.7 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) betaPIX_CC PF16523.5 ORF83519 - 0.01 15.7 0.3 0.014 15.2 0.2 1.5 1 1 0 1 1 1 1 betaPIX coiled coil DUF2780 PF11075.8 ORF83519 - 0.018 15.2 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function VcgC/VcgE (DUF2780) SpoIIM PF01944.17 ORF83195 - 0.061 13.4 4.6 0.078 13.0 4.6 1.2 1 0 0 1 1 1 0 Stage II sporulation protein M NOD PF06816.13 ORF82955 - 0.079 12.6 0.2 0.12 12.1 0.2 1.3 1 0 0 1 1 1 0 NOTCH protein DUF551 PF04448.12 ORF82067 - 0.085 13.8 0.0 0.12 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF551) CDC73_C PF05179.14 ORF81914 - 2.7e-11 43.4 0.0 3e-11 43.3 0.0 1.0 1 0 0 1 1 1 1 RNA pol II accessory factor, Cdc73 family, C-terminal 40S_S4_C PF16121.5 ORF81679 - 0.024 14.3 0.6 0.035 13.8 0.6 1.2 1 0 0 1 1 1 0 40S ribosomal protein S4 C-terminus Adeno_E3_CR2 PF02439.15 ORF80564 - 0.055 13.2 2.7 0.096 12.5 2.7 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 PRD PF00874.20 ORF80439 - 0.022 15.0 0.7 0.028 14.7 0.7 1.1 1 0 0 1 1 1 0 PRD domain AKAP_110 PF05716.13 ORF79901 - 0.15 10.3 0.0 0.16 10.2 0.0 1.0 1 0 0 1 1 1 0 A-kinase anchor protein 110 kDa (AKAP 110) VWA_N2 PF16164.5 ORF79768 - 0.1 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 VWA N-terminal Rad60-SLD PF11976.8 ORF79488 - 1.6e-09 37.4 0.0 1.8e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Big_3_5 PF16640.5 ORF79375 - 0.011 15.8 0.1 0.012 15.8 0.1 1.1 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) Glyco_hydro_20 PF00728.22 ORF79050 - 0.036 13.5 0.2 0.036 13.5 0.2 1.5 2 0 0 2 2 2 0 Glycosyl hydrolase family 20, catalytic domain CBP_BcsR PF10945.8 ORF78916 - 0.025 14.0 0.3 0.048 13.1 0.3 1.5 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR Rab5ip PF07019.12 ORF78632 - 2.1e-09 37.8 3.0 2.4e-09 37.7 3.0 1.0 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) DUF92 PF01940.16 ORF78632 - 0.013 14.9 0.1 0.013 14.9 0.1 1.0 1 0 0 1 1 1 0 Integral membrane protein DUF92 DUF485 PF04341.12 ORF78632 - 0.037 14.0 3.4 0.087 12.8 3.4 1.5 1 1 0 1 1 1 0 Protein of unknown function, DUF485 Asp4 PF16996.5 ORF78124 - 0.0073 16.1 0.2 3 7.7 0.0 2.2 2 0 0 2 2 2 2 Accessory secretory protein Sec Asp4 Flu_C_NS1 PF03506.13 ORF77915 - 0.0092 16.0 0.4 0.01 15.8 0.4 1.0 1 0 0 1 1 1 1 Influenza C non-structural protein (NS1) EPF PF17181.4 ORF77885 - 0.0044 17.0 0.5 0.0063 16.5 0.5 1.2 1 0 0 1 1 1 1 Epidermal patterning factor proteins Pkinase PF00069.25 ORF77617 - 0.0091 15.4 0.0 0.0093 15.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Aurora-A_bind PF09041.10 ORF77297 - 0.054 13.6 0.9 0.064 13.3 0.9 1.1 1 0 0 1 1 1 0 Aurora-A binding TPR_12 PF13424.6 ORF7709 - 0.00043 20.5 0.1 0.00049 20.3 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat CobW_C PF07683.14 ORF76960 - 0.054 13.4 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 Cobalamin synthesis protein cobW C-terminal domain Pro_CA PF00484.19 ORF75816 - 6.9e-15 55.7 0.0 7.8e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 Carbonic anhydrase LptF_LptG PF03739.14 ORF75789 - 1.4 7.7 6.8 1.6 7.5 6.8 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG DUF4131 PF13567.6 ORF75789 - 2.6 7.7 4.7 2.8 7.6 4.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) TssO PF17561.2 ORF75789 - 6.4 6.9 7.6 7.7 6.6 7.6 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO DUF1600 PF07667.11 ORF75753 - 0.0077 16.4 4.5 0.017 15.3 4.5 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1600) MSV199 PF10553.9 ORF75632 - 0.072 13.3 0.2 0.082 13.2 0.2 1.0 1 0 0 1 1 1 0 MSV199 domain OmdA PF13376.6 ORF75564 - 0.0063 16.5 0.1 0.0087 16.1 0.1 1.4 1 0 0 1 1 1 1 Bacteriocin-protection, YdeI or OmpD-Associated FixP_N PF14715.6 ORF75339 - 0.48 10.2 2.4 0.8 9.5 2.4 1.3 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Cm_res_leader PF08077.11 ORF74667 - 0.19 11.9 1.6 0.66 10.3 0.1 2.4 1 1 1 2 2 2 0 Chloramphenicol resistance gene leader peptide DUF3439 PF11921.8 ORF74624 - 0.19 11.7 0.2 0.21 11.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Pkinase PF00069.25 ORF7461 - 0.032 13.6 0.0 0.093 12.1 0.0 1.6 2 0 0 2 2 2 0 Protein kinase domain FAM216B PF15107.6 ORF74511 - 0.12 12.2 0.1 0.14 12.1 0.1 1.1 1 0 0 1 1 1 0 FAM216B protein family DUF3290 PF11694.8 ORF74511 - 0.13 12.2 0.5 0.18 11.7 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) MMADHC PF10229.9 ORF74317 - 0.016 14.9 0.0 0.02 14.7 0.0 1.0 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein NOD PF06816.13 ORF74135 - 0.079 12.6 0.2 0.12 12.1 0.2 1.3 1 0 0 1 1 1 0 NOTCH protein Nop10p PF04135.12 ORF73972 - 6.8e-20 70.8 0.7 8.1e-20 70.6 0.7 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family Smg8_Smg9 PF10220.9 ORF7362 - 0.012 13.9 0.3 0.013 13.9 0.3 1.0 1 0 0 1 1 1 0 Smg8_Smg9 Cyd_oper_YbgE PF09600.10 ORF73546 - 0.012 15.9 0.7 0.013 15.9 0.7 1.1 1 0 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) DUF3888 PF13027.6 ORF72981 - 0.014 15.8 0.4 0.017 15.6 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3888) RNase_P_p30 PF01876.16 ORF72882 - 0.21 11.0 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 RNase P subunit p30 PRD PF00874.20 ORF72866 - 0.022 15.0 0.7 0.028 14.7 0.7 1.1 1 0 0 1 1 1 0 PRD domain DUF1482 PF07358.11 ORF72849 - 0.041 13.8 0.0 0.05 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1482) AWPM-19 PF05512.11 ORF72771 - 0.029 14.6 1.0 0.029 14.6 1.0 1.0 1 0 0 1 1 1 0 AWPM-19-like family DUF3439 PF11921.8 ORF72466 - 0.19 11.7 0.2 0.21 11.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) SLAM PF06214.11 ORF72261 - 0.051 13.6 0.3 0.062 13.3 0.3 1.1 1 0 0 1 1 1 0 Signaling lymphocytic activation molecule (SLAM) protein Spc24 PF08286.11 ORF7221 - 0.032 14.5 1.2 0.033 14.4 1.2 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Orthoreo_P10 PF07204.11 ORF72171 - 0.041 13.8 0.0 0.045 13.7 0.0 1.1 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 Lysis_col PF02402.16 ORF71646 - 0.043 13.5 0.2 1.8 8.3 0.0 2.3 2 0 0 2 2 2 0 Lysis protein DUF819 PF05684.12 ORF7151 - 6.5e-13 48.5 0.1 7.1e-13 48.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF819) PLATZ PF04640.14 ORF71442 - 0.041 14.5 0.3 0.048 14.3 0.3 1.1 1 0 0 1 1 1 0 PLATZ transcription factor bacHORMA_1 PF18138.1 ORF71015 - 0.14 12.0 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial HORMA domain family 1 Mon1 PF03164.14 ORF70997 - 0.00024 20.3 0.2 0.00024 20.3 0.2 1.0 1 0 0 1 1 1 1 Trafficking protein Mon1 DUF1600 PF07667.11 ORF70601 - 0.2 11.8 6.0 0.88 9.8 6.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1600) SH PF01445.17 ORF70557 - 9.3 6.3 10.2 0.2 11.7 2.0 2.0 1 1 1 2 2 2 0 Viral small hydrophobic protein CTP_synth_N PF06418.14 ORF70539 - 0.11 11.8 0.2 21 4.3 0.0 1.8 1 1 0 1 1 1 0 CTP synthase N-terminus PBP1_TM PF14812.6 ORF70101 - 7 7.1 9.0 11 6.5 9.0 1.4 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Prominin PF05478.11 ORF69928 - 1.3 6.9 3.7 1.4 6.7 3.7 1.0 1 0 0 1 1 1 0 Prominin DUF713 PF05218.14 ORF69268 - 0.016 15.0 0.0 0.019 14.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF713) AIF-MLS PF14962.6 ORF69268 - 0.099 12.6 0.0 0.11 12.5 0.0 1.0 1 0 0 1 1 1 0 Mitochondria Localisation Sequence DUF5550 PF17704.1 ORF69115 - 0.041 14.0 0.1 0.049 13.8 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5550) DUF4081 PF13312.6 ORF69076 - 0.019 15.1 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4081) UPF0515 PF15135.6 ORF69076 - 0.043 13.2 0.5 0.043 13.2 0.5 1.0 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 CobW_C PF07683.14 ORF68298 - 0.054 13.4 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 Cobalamin synthesis protein cobW C-terminal domain Asp4 PF16996.5 ORF68155 - 0.0073 16.1 0.2 3 7.7 0.0 2.2 2 0 0 2 2 2 2 Accessory secretory protein Sec Asp4 MORN PF02493.20 ORF67968 - 1.1e-05 25.1 13.0 0.016 15.0 1.0 3.3 3 1 0 3 3 3 3 MORN repeat DUF3674 PF12426.8 ORF67464 - 0.019 15.0 0.1 0.029 14.4 0.1 1.3 1 0 0 1 1 1 0 RNA dependent RNA polymerase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks392.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks392.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks392.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks392.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Herpes_UL74 PF07982.12 ORF66630 - 0.047 12.7 0.1 0.048 12.6 0.1 1.0 1 0 0 1 1 1 0 Herpes UL74 glycoproteins SmpA_OmlA PF04355.13 ORF66587 - 0.04 13.7 0.0 0.069 12.9 0.0 1.4 1 1 0 1 1 1 0 SmpA / OmlA family DUF2859 PF11072.8 ORF66367 - 0.086 12.6 0.0 0.089 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) DUF2271 PF10029.9 ORF66161 - 0.033 13.8 0.2 0.048 13.3 0.2 1.2 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) Dopey_N PF04118.14 ORF65600 - 0.056 12.5 0.1 0.068 12.3 0.1 1.0 1 0 0 1 1 1 0 Dopey, N-terminal GST_C_3 PF14497.6 ORF6560 - 1.6e-11 44.2 0.1 1.7e-11 44.2 0.1 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF6560 - 7.2e-05 22.9 0.1 0.00011 22.3 0.1 1.3 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF6560 - 0.0013 18.8 0.0 0.0014 18.6 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain SapB_1 PF05184.15 ORF6560 - 0.089 12.8 0.1 0.27 11.3 0.0 1.9 2 0 0 2 2 2 0 Saposin-like type B, region 1 DUF3802 PF12290.8 ORF6459 - 0.045 14.3 0.1 0.06 13.9 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3802) Herpes_UL49_2 PF04823.12 ORF6404 - 0.04 14.0 0.5 0.047 13.8 0.5 1.0 1 0 0 1 1 1 0 Herpesvirus UL49 tegument protein RTX_C PF08339.10 ORF63443 - 0.0062 16.6 2.1 0.0062 16.6 2.1 1.1 1 0 0 1 1 1 1 RTX C-terminal domain Pkinase PF00069.25 ORF63373 - 4.5e-05 22.9 0.1 5e-05 22.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain DZR PF12773.7 ORF62723 - 0.16 12.0 4.8 0.22 11.6 4.8 1.3 1 0 0 1 1 1 0 Double zinc ribbon Thaumatin PF00314.17 ORF62042 - 0.16 11.6 3.6 0.17 11.5 3.6 1.0 1 0 0 1 1 1 0 Thaumatin family MttA_Hcf106 PF02416.16 ORF61850 - 0.064 12.6 0.1 0.095 12.0 0.1 1.2 1 0 0 1 1 1 0 mttA/Hcf106 family Neurokinin_B PF03823.14 ORF61126 - 0.4 10.8 1.9 17 5.5 0.1 2.1 2 0 0 2 2 2 0 Neurokinin B Nup188 PF10487.9 ORF6103 - 0.079 10.9 0.1 0.091 10.7 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin subcomplex protein binding to Pom34 DegT_DnrJ_EryC1 PF01041.17 ORF6103 - 0.13 11.5 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family TFR_dimer PF04253.15 ORF60801 - 0.084 13.0 0.4 0.093 12.8 0.4 1.0 1 0 0 1 1 1 0 Transferrin receptor-like dimerisation domain DNA_pol3_beta_2 PF02767.16 ORF60739 - 0.14 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III beta subunit, central domain NOD PF06816.13 ORF60560 - 0.079 12.6 0.2 0.12 12.1 0.2 1.3 1 0 0 1 1 1 0 NOTCH protein DUF104 PF01954.16 ORF60086 - 0.024 15.1 0.0 0.054 13.9 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function DUF104 HATPase_c_5 PF14501.6 ORF599 - 0.038 13.9 0.0 0.046 13.6 0.0 1.1 1 0 0 1 1 1 0 GHKL domain Pox_A12 PF04651.13 ORF59838 - 0.0054 16.8 1.8 0.0055 16.8 1.8 1.0 1 0 0 1 1 1 1 Poxvirus A12 protein Pro-NT_NN PF07421.11 ORF59812 - 0.07 13.4 0.1 0.077 13.3 0.1 1.1 1 0 0 1 1 1 0 Neurotensin/neuromedin N precursor Zn_ribbon_SprT PF17283.2 ORF59353 - 0.0006 19.7 4.1 0.0017 18.3 4.1 1.7 1 1 0 1 1 1 1 SprT-like zinc ribbon domain DUF515 PF04415.12 ORF5887 - 2.5 6.4 5.9 2.6 6.3 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) HisKA_3 PF07730.13 ORF58638 - 0.038 14.5 0.9 0.078 13.5 0.9 1.6 1 1 0 1 1 1 0 Histidine kinase DUF4054 PF13262.6 ORF58638 - 0.039 14.0 0.1 0.04 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4054) CDC14 PF08045.11 ORF58638 - 0.059 12.5 0.2 0.067 12.3 0.2 1.0 1 0 0 1 1 1 0 Cell division control protein 14, SIN component PhaP_Bmeg PF09602.10 ORF58638 - 0.073 13.0 0.1 0.08 12.9 0.1 1.1 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) DUF948 PF06103.11 ORF58638 - 0.12 12.7 0.0 0.17 12.2 0.0 1.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) FdsD PF11390.8 ORF58528 - 0.042 14.2 0.2 0.051 13.9 0.2 1.1 1 0 0 1 1 1 0 NADH-dependant formate dehydrogenase delta subunit FdsD LZ3wCH PF18517.1 ORF58520 - 0.14 12.3 3.0 0.19 11.9 2.2 1.7 1 1 1 2 2 2 0 Leucine zipper with capping helix domain Fungus-induced PF10917.8 ORF58365 - 0.2 12.0 0.9 0.28 11.5 0.9 1.2 1 0 0 1 1 1 0 Fungus-induced protein OrfB_IS605 PF01385.19 ORF57769 - 0.021 15.0 0.5 0.022 15.0 0.5 1.1 1 0 0 1 1 1 0 Probable transposase DUF832 PF05734.11 ORF57265 - 0.028 13.9 0.6 0.028 13.9 0.6 1.1 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) AAA_27 PF13514.6 ORF57265 - 0.08 12.5 0.0 0.084 12.4 0.0 1.0 1 0 0 1 1 1 0 AAA domain Cm_res_leader PF08077.11 ORF57143 - 0.19 11.9 1.6 0.66 10.3 0.1 2.4 1 1 1 2 2 2 0 Chloramphenicol resistance gene leader peptide cNMP_binding PF00027.29 ORF57087 - 8.1e-06 25.8 0.0 9.8e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain SLATT_4 PF18186.1 ORF57035 - 0.3 10.7 0.2 0.31 10.7 0.2 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 MCPVI PF02993.14 ORF56831 - 0.12 12.2 0.2 0.13 12.0 0.2 1.0 1 0 0 1 1 1 0 Minor capsid protein VI 3-alpha PF03475.14 ORF56796 - 0.9 9.5 5.7 0.35 10.8 2.9 1.9 2 0 0 2 2 2 0 3-alpha domain Pentapeptide_3 PF13576.6 ORF56683 - 0.0059 16.7 5.8 0.0075 16.4 5.8 1.2 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) TPR_1 PF00515.28 ORF56110 - 0.0022 17.8 0.0 0.0033 17.2 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF56110 - 0.044 13.9 0.0 0.067 13.3 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF56110 - 0.067 13.4 0.0 0.092 13.0 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Peripla_BP_2 PF01497.18 ORF56110 - 0.13 11.8 0.1 0.17 11.4 0.1 1.4 1 1 0 1 1 1 0 Periplasmic binding protein PfkB PF00294.24 ORF55370 - 0.0065 15.8 0.0 0.0068 15.7 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase DUF5531 PF17671.1 ORF5514 - 0.11 12.3 0.0 0.13 12.2 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5531) NAD_binding_1 PF00175.21 ORF54975 - 0.081 13.6 0.0 0.12 13.0 0.0 1.3 1 0 0 1 1 1 0 Oxidoreductase NAD-binding domain DUF4514 PF14986.6 ORF54368 - 0.2 11.6 0.5 0.2 11.6 0.5 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4514) AnfO_nitrog PF09582.10 ORF54250 - 0.039 13.3 0.3 0.044 13.1 0.3 1.0 1 0 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) Aurora-A_bind PF09041.10 ORF53737 - 0.054 13.6 0.9 0.064 13.3 0.9 1.1 1 0 0 1 1 1 0 Aurora-A binding Dynactin_p62 PF05502.13 ORF5355 - 0.049 12.4 1.0 0.057 12.2 1.0 1.0 1 0 0 1 1 1 0 Dynactin p62 family DUF3950 PF13132.6 ORF53117 - 2.1e-19 69.0 0.2 3e-19 68.4 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3950) EMP24_GP25L PF01105.24 ORF52930 - 9.4e-06 25.7 2.5 1.1e-05 25.5 2.5 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD TB PF00683.17 ORF52886 - 1.3 8.8 8.6 0.7 9.7 6.5 1.7 1 1 0 1 1 1 0 TB domain Metallophos PF00149.28 ORF52385 - 0.00078 20.0 0.0 0.00082 19.9 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase HemY_N PF07219.13 ORF52314 - 0.17 12.1 0.1 0.18 12.0 0.1 1.1 1 0 0 1 1 1 0 HemY protein N-terminus TPK_B1_binding PF04265.14 ORF51745 - 0.17 11.6 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain RNR_N PF08343.10 ORF51404 - 0.022 14.8 0.5 0.11 12.5 0.2 1.9 1 1 0 2 2 2 0 Ribonucleotide reductase N-terminal EPF PF17181.4 ORF50965 - 0.0044 17.0 0.5 0.0063 16.5 0.5 1.2 1 0 0 1 1 1 1 Epidermal patterning factor proteins HHH_6 PF14579.6 ORF50683 - 0.07 13.4 0.0 0.081 13.2 0.0 1.1 1 0 0 1 1 1 0 Helix-hairpin-helix motif Dynamitin PF04912.14 ORF50524 - 0.015 14.7 0.1 0.016 14.6 0.1 1.1 1 0 0 1 1 1 0 Dynamitin Phasin PF05597.11 ORF50524 - 0.06 13.3 0.5 0.07 13.1 0.5 1.1 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF1270 PF06900.11 ORF50297 - 0.45 10.9 4.8 0.22 11.9 2.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1270) Ras PF00071.22 ORF50241 - 1.1e-08 34.9 0.0 1.2e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF50241 - 1.5e-07 31.6 0.0 1.7e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 ORF50241 - 0.00032 20.2 0.0 0.00032 20.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial TniB protein MMR_HSR1 PF01926.23 ORF50241 - 0.0016 18.5 0.0 0.0017 18.4 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF50241 - 0.0037 16.7 0.0 0.0037 16.7 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 ORF50241 - 0.0043 16.5 0.0 0.0046 16.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family AAA_7 PF12775.7 ORF50241 - 0.0048 16.4 0.0 0.0048 16.4 0.0 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region FeoB_N PF02421.18 ORF50241 - 0.024 14.2 0.0 0.052 13.1 0.0 1.7 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_22 PF13401.6 ORF50241 - 0.041 14.1 0.0 0.046 14.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain TRF PF08558.10 ORF50179 - 0.033 13.8 2.1 0.037 13.6 2.1 1.0 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) Med22 PF06179.12 ORF49847 - 0.011 16.0 1.2 0.011 16.0 1.2 1.5 1 1 1 2 2 2 0 Surfeit locus protein 5 subunit 22 of Mediator complex Sec62 PF03839.16 ORF49847 - 8 5.9 10.3 8.8 5.8 10.3 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 DUF3923 PF13061.6 ORF49835 - 0.023 14.8 0.3 0.025 14.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3923) DUF3674 PF12426.8 ORF49833 - 0.041 13.9 0.2 0.06 13.4 0.2 1.4 1 0 0 1 1 1 0 RNA dependent RNA polymerase UPF0149 PF03695.13 ORF49826 - 0.028 14.7 0.0 0.028 14.7 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0149) SAMP PF05924.11 ORF49708 - 0.07 12.4 0.8 0.18 11.2 0.8 1.7 1 0 0 1 1 1 0 SAMP Motif PriX PF18689.1 ORF49656 - 0.073 13.4 0.1 0.078 13.3 0.1 1.1 1 0 0 1 1 1 0 Primase X SLATT_3 PF18184.1 ORF49656 - 0.1 12.8 0.1 0.11 12.6 0.1 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 3 DUF1844 PF08899.11 ORF49589 - 0.0073 16.6 0.1 0.009 16.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1844) Ras PF00071.22 ORF49440 - 1.1e-08 34.9 0.0 1.2e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF49440 - 1.5e-07 31.6 0.0 1.7e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 ORF49440 - 0.00032 20.2 0.0 0.00032 20.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial TniB protein MMR_HSR1 PF01926.23 ORF49440 - 0.0016 18.5 0.0 0.0017 18.4 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF49440 - 0.0037 16.7 0.0 0.0037 16.7 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 ORF49440 - 0.0043 16.5 0.0 0.0046 16.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family AAA_7 PF12775.7 ORF49440 - 0.0048 16.4 0.0 0.0048 16.4 0.0 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region FeoB_N PF02421.18 ORF49440 - 0.024 14.2 0.0 0.052 13.1 0.0 1.7 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_22 PF13401.6 ORF49440 - 0.041 14.1 0.0 0.046 14.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain Fig1 PF12351.8 ORF48948 - 0.032 14.2 1.5 0.034 14.1 1.5 1.0 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 DUF5510 PF17629.2 ORF48948 - 0.059 13.3 0.2 0.083 12.8 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5510) DUF4246 PF14033.6 ORF48549 - 0.1 11.7 0.0 0.1 11.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4246) LytTR PF04397.15 ORF48518 - 0.039 14.2 0.1 0.044 14.0 0.1 1.2 1 0 0 1 1 1 0 LytTr DNA-binding domain DiS_P_DiS PF06750.13 ORF48316 - 0.1 12.7 1.2 0.34 11.0 0.4 1.8 2 0 0 2 2 2 0 Bacterial Peptidase A24 N-terminal domain Choline_sulf_C PF12411.8 ORF47817 - 0.049 13.4 0.0 0.069 13.0 0.0 1.2 1 0 0 1 1 1 0 Choline sulfatase enzyme C terminal Nucleos_tra2_C PF07662.13 ORF47817 - 0.18 11.7 0.1 0.21 11.4 0.1 1.0 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus Novirhabdo_Nv PF05554.11 ORF47451 - 0.023 14.5 0.0 0.025 14.3 0.0 1.1 1 0 0 1 1 1 0 Viral hemorrhagic septicemia virus non-virion protein Mtr2 PF10429.9 ORF47432 - 0.18 11.8 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 BCLP PF12304.8 ORF47125 - 0.16 11.5 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Beta-casein like protein CBM_20 PF00686.19 ORF47120 - 1.7e-07 31.0 0.1 2.1e-07 30.8 0.1 1.1 1 0 0 1 1 1 1 Starch binding domain hemP PF10636.9 ORF47001 - 0.038 13.8 0.1 0.079 12.8 0.1 1.5 1 0 0 1 1 1 0 Hemin uptake protein hemP RasGEF PF00617.19 ORF47001 - 0.093 12.9 0.4 0.11 12.7 0.4 1.1 1 0 0 1 1 1 0 RasGEF domain PglL_A PF15864.5 ORF46950 - 0.029 14.1 0.5 0.044 13.5 0.5 1.3 1 0 0 1 1 1 0 Protein glycosylation ligase DUF1351 PF07083.11 ORF46927 - 0.05 13.4 0.1 0.058 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1351) SAM_decarbox PF01536.16 ORF4687 - 1.3 8.0 4.5 4.1 6.3 4.5 1.7 1 1 0 1 1 1 0 Adenosylmethionine decarboxylase FeoB_C PF07664.12 ORF46733 - 0.12 12.1 0.3 0.16 11.7 0.3 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B C terminus CRAL_TRIO_2 PF13716.6 ORF46462 - 0.15 12.2 3.4 0.23 11.6 3.4 1.4 1 1 0 1 1 1 0 Divergent CRAL/TRIO domain DUF515 PF04415.12 ORF46422 - 2.5 6.4 5.9 2.6 6.3 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Thaumatin PF00314.17 ORF46410 - 0.16 11.6 3.6 0.17 11.5 3.6 1.0 1 0 0 1 1 1 0 Thaumatin family LOB PF03195.14 ORF46354 - 0.61 10.7 4.0 0.75 10.4 4.0 1.2 1 0 0 1 1 1 0 Lateral organ boundaries (LOB) domain MORN PF02493.20 ORF46277 - 3e-08 33.1 6.0 0.00056 19.7 0.3 3.1 3 0 0 3 3 3 2 MORN repeat DUF3048_C PF17479.2 ORF46277 - 0.012 15.9 0.2 0.017 15.5 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain RTX_C PF08339.10 ORF4623 - 0.0062 16.6 2.1 0.0062 16.6 2.1 1.1 1 0 0 1 1 1 1 RTX C-terminal domain Pkinase PF00069.25 ORF45905 - 7e-05 22.3 0.0 7.8e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45905 - 0.061 12.6 0.0 0.069 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase MTES_1575 PF18741.1 ORF44858 - 0.14 12.4 0.1 0.14 12.3 0.1 1.1 1 0 0 1 1 1 0 REase_MTES_1575 DUF4843 PF16132.5 ORF44766 - 0.0034 17.0 0.1 0.0034 17.0 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4843) SID PF11778.8 ORF44638 - 0.094 12.8 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Septation initiation PCSK9_C2 PF18464.1 ORF44553 - 0.085 12.9 2.5 0.34 11.0 2.5 2.0 1 1 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain TRP PF06011.12 ORF44536 - 0.028 13.1 0.1 0.032 13.0 0.1 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Ly49 PF08391.10 ORF44536 - 0.036 14.4 0.2 0.043 14.2 0.2 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region Syndecan PF01034.20 ORF44536 - 0.14 12.1 0.3 0.16 11.9 0.3 1.2 1 0 0 1 1 1 0 Syndecan domain Coronavirus_5 PF05528.11 ORF44478 - 0.039 13.9 0.4 0.047 13.7 0.4 1.2 1 0 0 1 1 1 0 Coronavirus gene 5 protein Polysacc_deac_1 PF01522.21 ORF44204 - 0.1 12.5 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Polysaccharide deacetylase Med22 PF06179.12 ORF44133 - 0.011 16.0 1.2 0.011 16.0 1.2 1.5 1 1 1 2 2 2 0 Surfeit locus protein 5 subunit 22 of Mediator complex Sec62 PF03839.16 ORF44133 - 8 5.9 10.3 8.8 5.8 10.3 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Drf_GBD PF06371.13 ORF43138 - 0.0037 16.9 0.0 0.0052 16.4 0.0 1.3 1 0 0 1 1 1 1 Diaphanous GTPase-binding Domain HEAT PF02985.22 ORF43138 - 0.05 13.9 0.2 0.17 12.2 0.0 1.9 2 0 0 2 2 2 0 HEAT repeat TAF8_C PF10406.9 ORF42796 - 0.11 13.1 0.1 0.15 12.6 0.1 1.2 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term Nop10p PF04135.12 ORF42294 - 6.8e-20 70.8 0.7 8.1e-20 70.6 0.7 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family FlaF PF07309.11 ORF42270 - 0.031 14.3 0.1 0.035 14.1 0.1 1.1 1 0 0 1 1 1 0 Flagellar protein FlaF DUF1967 PF09269.11 ORF41906 - 0.025 14.5 0.5 0.033 14.1 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) UPF0767 PF15990.5 ORF41906 - 0.068 13.3 1.4 0.078 13.1 1.4 1.1 1 0 0 1 1 1 0 UPF0767 family vMSA PF00695.19 ORF41896 - 0.021 13.9 0.0 0.023 13.8 0.0 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus MFS_1 PF07690.16 ORF41896 - 0.054 12.4 0.1 0.054 12.4 0.1 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily GRIP PF01465.20 ORF41395 - 0.0042 17.0 0.2 0.008 16.1 0.2 1.4 1 0 0 1 1 1 1 GRIP domain CBP_BcsR PF10945.8 ORF41230 - 0.025 14.0 0.3 0.048 13.1 0.3 1.5 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR Pkinase PF00069.25 ORF41172 - 0.00024 20.6 0.0 0.00027 20.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41172 - 0.00043 19.7 0.0 0.00045 19.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3645 PF12359.8 ORF41106 - 0.17 11.3 0.5 6.3 6.3 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3645) DUF5480 PF17576.2 ORF40528 - 0.016 15.2 0.2 0.029 14.3 0.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5480) STT3_PglB_C PF18527.1 ORF40449 - 0.025 14.7 0.1 0.028 14.5 0.1 1.1 1 0 0 1 1 1 0 STT3/PglB C-terminal beta-barrel domain DUF3858 PF12970.7 ORF40225 - 0.04 13.9 0.6 0.048 13.7 0.5 1.2 1 1 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3858) Ribosomal_L27e PF01777.18 ORF40225 - 0.043 14.2 2.3 0.05 13.9 2.3 1.2 1 0 0 1 1 1 0 Ribosomal L27e protein family Omega-toxin PF06357.11 ORF39970 - 0.24 11.2 2.2 4.7 7.1 0.1 2.2 1 1 1 2 2 2 0 Omega-atracotoxin AAA_21 PF13304.6 ORF39799 - 6.2e-07 29.5 0.0 7.7e-07 29.2 0.0 1.0 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 ORF39799 - 0.04 14.1 0.0 0.14 12.4 0.0 1.7 1 1 1 2 2 2 0 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF39799 - 0.08 12.4 0.0 0.08 12.4 0.0 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain ParBc PF02195.18 ORF39320 - 0.23 11.8 0.0 0.25 11.7 0.0 1.2 1 0 0 1 1 1 0 ParB-like nuclease domain FERM_F1 PF18379.1 ORF39306 - 0.095 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 FERM F1 ubiquitin-like domain Med20 PF08612.11 ORF39108 - 0.17 11.2 0.0 0.18 11.1 0.0 1.0 1 0 0 1 1 1 0 TATA-binding related factor (TRF) of subunit 20 of Mediator complex DUF3379 PF11859.8 ORF38868 - 0.049 12.9 1.5 0.048 13.0 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) Kelch_5 PF13854.6 ORF38709 - 1.6e-09 37.5 0.0 2.2e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 ORF38709 - 3.3e-09 36.2 0.0 3.8e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 ORF38709 - 2.3e-08 33.9 0.0 2.7e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF38709 - 2.4e-08 33.6 0.0 2.8e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 ORF38709 - 4.1e-08 33.2 0.0 5.6e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 ORF38709 - 4.6e-06 26.8 0.0 5.6e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain DUF4311 PF14188.6 ORF38414 - 0.067 13.0 0.1 0.071 12.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4311) MIF4G_like_2 PF09090.11 ORF38035 - 0.087 12.3 0.1 0.087 12.3 0.1 1.0 1 0 0 1 1 1 0 MIF4G like EF_assoc_1 PF08355.12 ORF37876 - 0.1 12.2 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 EF hand associated P3A PF08727.11 ORF37876 - 0.27 10.7 1.5 0.26 10.7 0.7 1.5 1 1 0 1 1 1 0 Poliovirus 3A protein like Phage_holin_2_1 PF04971.12 ORF37792 - 0.038 14.0 1.1 0.053 13.5 1.1 1.2 1 0 0 1 1 1 0 Bacteriophage P21 holin S AAA_29 PF13555.6 ORF37675 - 0.18 11.5 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF3103 PF11301.8 ORF37615 - 0.16 10.7 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3103) BA14K PF07886.11 ORF37615 - 2.3 8.2 5.2 7.4 6.5 5.2 1.8 1 1 0 1 1 1 0 BA14K-like protein EVI2A PF05399.11 ORF37523 - 0.17 11.4 2.0 0.19 11.3 2.0 1.1 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Pkinase PF00069.25 ORF37309 - 0.001 18.5 0.0 0.0012 18.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain ODR4-like PF14778.6 ORF37159 - 0.033 13.1 0.7 0.033 13.2 0.7 1.0 1 0 0 1 1 1 0 Olfactory receptor 4-like DUF4672 PF15716.5 ORF36614 - 1.6 8.3 7.9 1.6 8.3 7.5 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4672) FSIP2 PF15783.5 ORF3654 - 0.071 11.1 0.2 0.075 11.0 0.2 1.0 1 0 0 1 1 1 0 Fibrous sheath-interacting protein 2 O-antigen_lig PF13425.6 ORF36208 - 0.16 10.8 0.1 0.18 10.6 0.1 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3194 PF11419.8 ORF35810 - 0.0032 17.8 0.1 1.3 9.4 0.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF3194) CcmE PF03100.15 ORF35483 - 0.067 13.2 0.4 0.064 13.3 0.4 1.0 1 0 0 1 1 1 0 CcmE MinC_C PF03775.16 ORF35313 - 9.3e-12 44.8 0.0 9.9e-12 44.7 0.0 1.0 1 0 0 1 1 1 1 Septum formation inhibitor MinC, C-terminal domain zf-CCHC_5 PF14787.6 ORF3525 - 0.0034 17.0 1.1 0.012 15.3 0.4 2.0 2 0 0 2 2 2 1 GAG-polyprotein viral zinc-finger Med18 PF09637.10 ORF35090 - 0.049 13.5 0.0 0.049 13.5 0.0 1.0 1 0 0 1 1 1 0 Med18 protein DUF4620 PF15399.6 ORF34939 - 0.048 14.0 0.2 0.051 13.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4620) Ion_trans PF00520.31 ORF34732 - 2.9e-09 36.5 5.3 3.1e-09 36.4 5.3 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF34732 - 0.0043 15.8 1.6 0.0045 15.7 1.6 1.0 1 0 0 1 1 1 1 Polycystin cation channel PH_10 PF15411.6 ORF34728 - 0.054 13.8 1.7 0.06 13.6 1.7 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain 7TM_GPCR_Sru PF10322.9 ORF34728 - 0.56 9.5 6.9 0.61 9.3 6.9 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru zf_C2H2_10 PF18414.1 ORF3469 - 0.018 14.6 0.1 0.033 13.7 0.1 1.4 1 0 0 1 1 1 0 C2H2 type zinc-finger Glycophorin_A PF01102.18 ORF3469 - 1.4 9.2 3.8 0.48 10.7 1.1 1.6 1 1 1 2 2 2 0 Glycophorin A Beach PF02138.18 ORF34648 - 1.8e-09 37.4 0.0 1.8e-09 37.4 0.0 1.0 1 0 0 1 1 1 1 Beige/BEACH domain PDH PF02153.17 ORF34597 - 0.12 11.4 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 Prephenate dehydrogenase Strabismus PF06638.11 ORF34265 - 4.2 5.9 5.9 4.6 5.8 5.9 1.1 1 0 0 1 1 1 0 Strabismus protein ERGIC_N PF13850.6 ORF33564 - 0.1 13.0 0.2 0.12 12.8 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) UL42 PF17638.2 ORF33564 - 0.12 12.3 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 HCMV UL42 SecG PF03840.14 ORF33558 - 0.025 14.6 1.3 0.031 14.3 1.3 1.2 1 0 0 1 1 1 0 Preprotein translocase SecG subunit Phage_Gp23 PF10669.9 ORF33332 - 0.0015 18.8 0.7 0.0017 18.7 0.7 1.0 1 0 0 1 1 1 1 Protein gp23 (Bacteriophage A118) PTR PF12789.7 ORF33332 - 0.015 15.4 2.1 0.16 12.1 0.4 2.1 1 1 1 2 2 2 0 Phage tail repeat like Pkinase PF00069.25 ORF32979 - 7e-05 22.3 0.0 7.8e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF32979 - 0.061 12.6 0.0 0.069 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase BLACT_WH PF17778.1 ORF3297 - 0.027 14.5 0.0 0.061 13.3 0.0 1.6 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain Potex_coat PF06184.11 ORF32810 - 0.089 12.4 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Potexvirus coat protein EF_assoc_1 PF08355.12 ORF32525 - 0.1 12.2 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 EF hand associated P3A PF08727.11 ORF32525 - 0.27 10.7 1.5 0.26 10.7 0.7 1.5 1 1 0 1 1 1 0 Poliovirus 3A protein like Acyltransferase PF01553.21 ORF32133 - 0.012 15.2 0.0 0.012 15.2 0.0 1.1 1 0 0 1 1 1 0 Acyltransferase TMEM213 PF15192.6 ORF31999 - 0.099 12.6 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 TMEM213 family Pep_M12B_propep PF01562.19 ORF31875 - 0.087 13.1 0.4 0.093 13.0 0.4 1.0 1 0 0 1 1 1 0 Reprolysin family propeptide zf-C4 PF00105.18 ORF31875 - 0.27 11.7 4.7 0.36 11.3 4.7 1.3 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) Casc1 PF12366.8 ORF31545 - 0.062 12.8 0.0 0.062 12.8 0.0 1.0 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 VLPT PF07122.11 ORF31501 - 0.038 13.7 0.5 0.061 13.1 0.5 1.3 1 0 0 1 1 1 0 Variable length PCR target protein (VLPT) TB PF00683.17 ORF315 - 1.3 8.8 8.6 0.7 9.7 6.5 1.7 1 1 0 1 1 1 0 TB domain DUF1158 PF06643.11 ORF31404 - 0.02 15.4 0.1 0.022 15.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1158) F-box PF00646.33 ORF31201 - 0.01 15.7 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 0 F-box domain F-box-like PF12937.7 ORF31201 - 0.13 12.2 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 F-box-like DMAP1 PF05499.12 ORF30896 - 0.089 12.7 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 DNA methyltransferase 1-associated protein 1 (DMAP1) RTX_C PF08339.10 ORF30807 - 0.0062 16.6 2.1 0.0062 16.6 2.1 1.1 1 0 0 1 1 1 1 RTX C-terminal domain MatE PF01554.18 ORF30776 - 1.4e-09 37.8 0.5 1.5e-09 37.7 0.5 1.0 1 0 0 1 1 1 1 MatE 2-Hacid_dh_C PF02826.19 ORF30614 - 1.2e-08 34.5 0.2 1.6e-08 34.1 0.2 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIT1 PF01988.19 ORF30109 - 0.93 9.3 6.0 1.1 9.1 6.0 1.1 1 0 0 1 1 1 0 VIT family SRF-TF PF00319.18 ORF30 - 0.12 11.9 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 SRF-type transcription factor (DNA-binding and dimerisation domain) TAF8_C PF10406.9 ORF29918 - 0.11 13.1 0.1 0.15 12.6 0.1 1.2 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term Bcr-Abl_Oligo PF09036.10 ORF29405 - 0.0044 17.0 0.2 0.0049 16.8 0.2 1.1 1 0 0 1 1 1 1 Bcr-Abl oncoprotein oligomerisation domain NPV_P10 PF05531.12 ORF29405 - 0.051 14.0 0.2 0.06 13.8 0.2 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein SpoOE-like PF09388.10 ORF29405 - 0.062 13.2 0.5 2 8.4 0.0 2.2 1 1 1 2 2 2 0 Spo0E like sporulation regulatory protein DUF4349 PF14257.6 ORF29405 - 0.088 12.2 0.1 0.09 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) CysA_C_terminal PF17850.1 ORF29155 - 0.051 14.1 1.0 0.077 13.6 0.3 1.6 2 0 0 2 2 2 0 CysA C-terminal regulatory domain Matrilin_ccoil PF10393.9 ORF29092 - 0.012 15.4 0.1 0.023 14.6 0.1 1.4 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin DUF5129 PF17173.4 ORF29092 - 0.071 12.2 0.0 0.073 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) LIP PF03583.14 ORF28556 - 0.22 10.8 0.1 0.24 10.7 0.1 1.0 1 0 0 1 1 1 0 Secretory lipase EF-hand_7 PF13499.6 ORF28443 - 0.00016 22.0 0.1 0.00047 20.6 0.0 1.7 1 1 1 2 2 2 1 EF-hand domain pair Peptidase_M7 PF02031.16 ORF28443 - 0.0066 16.6 0.0 0.0074 16.4 0.0 1.1 1 0 0 1 1 1 1 Streptomyces extracellular neutral proteinase (M7) family EF-hand_6 PF13405.6 ORF28443 - 0.026 14.5 0.1 0.065 13.2 0.0 1.7 1 1 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 ORF28443 - 0.13 11.9 0.2 0.85 9.3 0.0 2.2 3 0 0 3 3 3 0 EF hand DUF2380 PF09533.10 ORF27753 - 0.11 12.2 0.4 0.11 12.1 0.4 1.0 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) HK PF02110.15 ORF2772 - 1e-08 34.9 0.5 1.1e-08 34.8 0.5 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family DUF4253 PF14062.6 ORF2772 - 0.026 14.7 0.0 0.026 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) Phos_pyr_kin PF08543.12 ORF2772 - 0.18 11.1 0.3 0.19 11.1 0.3 1.1 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Erp_C PF06780.11 ORF2766 - 0.0096 15.9 0.9 0.011 15.7 0.9 1.1 1 0 0 1 1 1 1 Erp protein C-terminus EHN PF06441.12 ORF2766 - 0.082 13.3 0.6 0.09 13.2 0.6 1.0 1 0 0 1 1 1 0 Epoxide hydrolase N terminus ARPC4 PF05856.12 ORF27524 - 0.022 14.4 0.1 0.024 14.3 0.1 1.0 1 0 0 1 1 1 0 ARP2/3 complex 20 kDa subunit (ARPC4) AGA2 PF17366.2 ORF27269 - 0.041 13.6 0.1 0.061 13.0 0.1 1.4 1 0 0 1 1 1 0 A-agglutinin-binding subunit Aga2 MamL-1 PF09596.10 ORF26988 - 0.06 13.6 0.5 0.06 13.6 0.5 1.7 2 0 0 2 2 2 0 MamL-1 domain TPR_12 PF13424.6 ORF26513 - 0.00043 20.5 0.1 0.00049 20.3 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat Pmp3 PF01679.17 ORF26442 - 0.068 13.4 0.2 0.098 12.9 0.2 1.3 1 0 0 1 1 1 0 Proteolipid membrane potential modulator DUF2016 PF09436.10 ORF25957 - 0.15 11.8 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) Aminotran_5 PF00266.19 ORF2551 - 3e-14 52.8 0.0 3.4e-14 52.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cas1_AcylT PF07779.12 ORF25304 - 0.012 14.5 0.1 0.012 14.5 0.1 1.0 1 0 0 1 1 1 0 10 TM Acyl Transferase domain found in Cas1p NOD PF06816.13 ORF24905 - 0.079 12.6 0.2 0.12 12.1 0.2 1.3 1 0 0 1 1 1 0 NOTCH protein DUF4428 PF14471.6 ORF24574 - 0.018 14.9 0.0 0.023 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) Pacifastin_I PF05375.13 ORF24532 - 3.5 7.4 8.6 0.33 10.7 2.7 2.1 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) Pkinase PF00069.25 ORF24464 - 1.9e-16 60.2 0.1 2.1e-16 60.1 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24464 - 4.1e-09 36.1 0.0 4.5e-09 36.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Bap31_Bap29_C PF18035.1 ORF24457 - 0.0015 18.5 0.3 0.0018 18.2 0.3 1.1 1 0 0 1 1 1 1 Bap31/Bap29 cytoplasmic coiled-coil domain DivIC PF04977.15 ORF24457 - 0.076 12.8 0.0 0.08 12.7 0.0 1.1 1 0 0 1 1 1 0 Septum formation initiator EcoRII-N PF09217.10 ORF24359 - 0.072 12.8 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease EcoRII, N-terminal SYS1 PF09801.9 ORF24349 - 9.2e-09 35.6 2.7 9.9e-09 35.5 2.7 1.0 1 0 0 1 1 1 1 Integral membrane protein S linking to the trans Golgi network Tom6 PF17112.5 ORF23995 - 0.098 12.2 0.1 0.18 11.3 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom6, fungal Pigment_DH PF06324.11 ORF23939 - 8.2 6.8 7.3 46 4.4 0.2 3.3 3 0 0 3 3 3 0 Pigment-dispersing hormone (PDH) ADP_ribosyl_GH PF03747.14 ORF23032 - 1.2e-05 25.3 0.0 1.2e-05 25.3 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Dodecin PF07311.12 ORF22934 - 0.041 14.1 0.4 0.83 10.0 0.1 2.0 1 1 1 2 2 2 0 Dodecin GRIP PF01465.20 ORF22703 - 6e-05 22.9 0.0 8.1e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 GRIP domain Rod-binding PF10135.9 ORF22494 - 0.11 13.1 0.1 0.48 11.0 0.0 1.8 2 0 0 2 2 2 0 Rod binding protein TRP PF06011.12 ORF2238 - 0.0014 17.5 1.4 0.0015 17.4 1.4 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel MRAP PF15183.6 ORF2238 - 1.2 9.1 4.4 1.3 9.0 4.0 1.4 1 1 0 1 1 1 0 Melanocortin-2 receptor accessory protein family TRP PF06011.12 ORF21644 - 0.028 13.1 0.1 0.032 13.0 0.1 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Ly49 PF08391.10 ORF21644 - 0.036 14.4 0.2 0.043 14.2 0.2 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region Syndecan PF01034.20 ORF21644 - 0.14 12.1 0.3 0.16 11.9 0.3 1.2 1 0 0 1 1 1 0 Syndecan domain C1_1 PF00130.22 ORF21592 - 0.035 14.0 4.8 0.045 13.6 4.8 1.5 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Ribosomal_S27e PF01667.17 ORF21515 - 0.031 14.0 0.1 0.04 13.6 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein S27 Uso1_p115_head PF04869.14 ORF20456 - 0.05 12.7 0.2 0.053 12.6 0.2 1.0 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, head region PPR_long PF17177.4 ORF18963 - 0.018 14.4 0.0 0.02 14.2 0.0 1.0 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP DUF4732 PF15876.5 ORF18886 - 0.075 13.1 0.0 0.075 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4732) Peptidase_M76 PF09768.9 ORF18835 - 2.2e-10 40.6 0.0 2.5e-10 40.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase M76 family COX4_pro_2 PF07835.12 ORF17936 - 0.15 12.2 0.1 0.15 12.2 0.1 2.4 3 0 0 3 3 3 0 Bacterial aa3 type cytochrome c oxidase subunit IV HemolysinCabind PF00353.19 ORF17434 - 0.13 12.2 0.2 0.19 11.8 0.2 1.1 1 0 0 1 1 1 0 RTX calcium-binding nonapeptide repeat (4 copies) Tn7_TnsC_Int PF11426.8 ORF17434 - 0.14 12.4 0.1 0.2 11.9 0.1 1.2 1 0 0 1 1 1 0 Tn7 transposition regulator TnsC DUF2197 PF09963.9 ORF17207 - 5 7.5 5.5 1.7 9.0 3.1 1.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) Tissue_fac PF01108.17 ORF17005 - 0.06 13.2 0.1 0.068 13.0 0.1 1.3 1 1 0 1 1 1 0 Tissue factor Peptidase_M91 PF14891.6 ORF17005 - 0.092 13.1 2.2 0.097 13.0 2.2 1.0 1 0 0 1 1 1 0 Effector protein CBP_CCPA PF17040.5 ORF16686 - 0.014 15.9 0.0 0.014 15.9 0.0 1.1 1 0 0 1 1 1 0 Cellulose-complementing protein A Ras PF00071.22 ORF16598 - 1.1e-08 34.9 0.0 1.2e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF16598 - 1.5e-07 31.6 0.0 1.7e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 ORF16598 - 0.00032 20.2 0.0 0.00032 20.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial TniB protein MMR_HSR1 PF01926.23 ORF16598 - 0.0016 18.5 0.0 0.0017 18.4 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF16598 - 0.0037 16.7 0.0 0.0037 16.7 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 ORF16598 - 0.0043 16.5 0.0 0.0046 16.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family AAA_7 PF12775.7 ORF16598 - 0.0048 16.4 0.0 0.0048 16.4 0.0 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region FeoB_N PF02421.18 ORF16598 - 0.024 14.2 0.0 0.052 13.1 0.0 1.7 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_22 PF13401.6 ORF16598 - 0.041 14.1 0.0 0.046 14.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain Bac_DNA_binding PF00216.21 ORF16254 - 0.014 15.6 0.0 0.017 15.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial DNA-binding protein Caudo_TAP PF02413.17 ORF16242 - 0.033 14.3 1.4 0.036 14.2 1.4 1.1 1 0 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK DUF5401 PF17380.2 ORF16242 - 0.088 10.9 8.3 0.084 10.9 8.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) PspB PF06667.12 ORF16242 - 0.094 12.8 1.9 0.11 12.6 1.9 1.2 1 0 0 1 1 1 0 Phage shock protein B DUF2098 PF09871.9 ORF16242 - 7.5 7.0 10.4 13 6.2 10.4 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) Bunya_NS-S PF01104.17 ORF15926 - 0.083 12.7 5.1 0.086 12.7 5.1 1.3 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s PRD PF00874.20 ORF15829 - 0.022 15.0 0.7 0.028 14.7 0.7 1.1 1 0 0 1 1 1 0 PRD domain DUF2937 PF11157.8 ORF15751 - 0.079 12.7 0.2 0.096 12.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) DUF3439 PF11921.8 ORF15183 - 0.19 11.7 0.2 0.21 11.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Asp4 PF16996.5 ORF1479 - 0.0073 16.1 0.2 3 7.7 0.0 2.2 2 0 0 2 2 2 2 Accessory secretory protein Sec Asp4 PRD PF00874.20 ORF14689 - 0.022 15.0 0.7 0.028 14.7 0.7 1.1 1 0 0 1 1 1 0 PRD domain DUF4099 PF13351.6 ORF14018 - 0.0041 17.4 0.4 0.0048 17.1 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4099) DUF2840 PF11000.8 ORF13913 - 0.058 13.2 0.0 0.063 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2840) Glucos_trans_II PF14264.6 ORF13889 - 0.21 10.9 8.4 0.18 11.1 8.4 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII Asp4 PF16996.5 ORF13241 - 0.0073 16.1 0.2 3 7.7 0.0 2.2 2 0 0 2 2 2 2 Accessory secretory protein Sec Asp4 Trypan_PARP PF05887.11 ORF13235 - 1.5 8.8 5.5 1.7 8.6 5.5 1.0 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF4637 PF15470.6 ORF13235 - 3.4 7.4 8.7 3.6 7.3 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) WH2 PF02205.20 ORF1304 - 0.041 13.7 0.1 0.077 12.9 0.1 1.4 1 0 0 1 1 1 0 WH2 motif Nas2_N PF18265.1 ORF1304 - 0.052 13.5 0.1 0.072 13.0 0.1 1.3 1 0 0 1 1 1 0 Nas2 N_terminal domain AreA_N PF07573.11 ORF12917 - 0.035 14.7 0.2 0.042 14.5 0.2 1.1 1 0 0 1 1 1 0 Nitrogen regulatory protein AreA N terminus PglL_A PF15864.5 ORF12632 - 0.029 14.1 0.5 0.044 13.5 0.5 1.3 1 0 0 1 1 1 0 Protein glycosylation ligase Asp4 PF16996.5 ORF1222 - 0.0073 16.1 0.2 3 7.7 0.0 2.2 2 0 0 2 2 2 2 Accessory secretory protein Sec Asp4 XPB_DRD PF18458.1 ORF11535 - 0.098 12.5 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain DUF4311 PF14188.6 ORF112574 - 0.067 13.0 0.1 0.071 12.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4311) Linker_histone PF00538.19 ORF111991 - 0.14 12.5 0.1 0.17 12.2 0.1 1.1 1 0 0 1 1 1 0 linker histone H1 and H5 family RNA12 PF10443.9 ORF111966 - 0.085 11.6 0.2 0.09 11.5 0.2 1.0 1 0 0 1 1 1 0 RNA12 protein DUF2859 PF11072.8 ORF111438 - 0.086 12.6 0.0 0.089 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) VirB3 PF05101.13 ORF1112 - 0.0049 17.1 0.8 0.0059 16.8 0.8 1.1 1 0 0 1 1 1 1 Type IV secretory pathway, VirB3-like protein GutM PF06923.11 ORF111191 - 0.081 13.0 0.3 0.11 12.6 0.2 1.3 1 1 0 1 1 1 0 Glucitol operon activator protein (GutM) Rho_Binding PF08912.11 ORF11094 - 0.00049 20.9 0.8 0.00073 20.3 0.8 1.3 1 0 0 1 1 1 1 Rho Binding Pet191_N PF10203.9 ORF110650 - 0.036 14.4 1.0 0.041 14.2 1.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein PET191 TRF PF08558.10 ORF110396 - 0.033 13.8 2.1 0.037 13.6 2.1 1.0 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) DUF4381 PF14316.6 ORF110203 - 0.14 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) DUF2370 PF10176.9 ORF110126 - 0.1 12.2 0.8 0.12 12.0 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) FYVE PF01363.21 ORF110112 - 1.2e-12 47.8 9.9 1.4e-12 47.5 9.9 1.1 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF110112 - 5.3e-07 29.9 6.0 5.6e-07 29.8 6.0 1.0 1 0 0 1 1 1 1 FYVE-type zinc finger C1_1 PF00130.22 ORF110112 - 0.0041 17.0 7.5 0.0049 16.7 7.5 1.1 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Prok-RING_2 PF14445.6 ORF110112 - 0.019 15.1 2.0 0.026 14.7 2.0 1.1 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 zf-B_box PF00643.24 ORF110112 - 0.041 14.0 9.1 0.27 11.4 9.1 1.9 1 1 0 1 1 1 0 B-box zinc finger UPF0167 PF03691.14 ORF110112 - 0.043 13.6 3.7 0.047 13.5 3.7 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0167) PP1_bind PF15276.6 ORF110112 - 0.12 12.7 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein phosphatase 1 binding DHHC PF01529.20 ORF110112 - 0.42 10.7 7.1 0.54 10.4 7.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase OmdA PF13376.6 ORF109995 - 0.0062 16.5 0.1 0.0087 16.1 0.1 1.4 1 0 0 1 1 1 1 Bacteriocin-protection, YdeI or OmpD-Associated Linker_histone PF00538.19 ORF109064 - 0.14 12.5 0.1 0.17 12.2 0.1 1.1 1 0 0 1 1 1 0 linker histone H1 and H5 family Nop10p PF04135.12 ORF109061 - 6.8e-20 70.8 0.7 8.1e-20 70.6 0.7 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family Nab2p_Zf1 PF18260.1 ORF109018 - 0.065 13.1 0.1 0.096 12.6 0.1 1.3 1 0 0 1 1 1 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 BAGE PF08180.11 ORF108946 - 0.084 13.0 0.0 0.21 11.7 0.0 1.6 2 0 0 2 2 2 0 B melanoma antigen family DUF3194 PF11419.8 ORF108492 - 0.0032 17.8 0.1 1.3 9.4 0.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF3194) Retrotran_gag_3 PF14244.6 ORF108311 - 0.059 13.2 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type TB PF00683.17 ORF107058 - 1.3 8.8 8.6 0.7 9.7 6.5 1.7 1 1 0 1 1 1 0 TB domain EBA-175_VI PF11556.8 ORF10671 - 0.015 15.6 0.1 0.017 15.4 0.1 1.1 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 Pkr1 PF08636.10 ORF105929 - 0.0073 16.4 0.3 0.01 15.9 0.3 1.3 1 1 0 1 1 1 1 ER protein Pkr1 MyTH4 PF00784.17 ORF105929 - 0.015 15.8 0.2 0.016 15.7 0.2 1.2 1 0 0 1 1 1 0 MyTH4 domain Cu-binding_MopE PF11617.8 ORF105540 - 0.33 11.2 2.7 2 8.6 0.1 2.5 1 1 1 2 2 2 0 Putative metal-binding motif ACT_3 PF10000.9 ORF105491 - 0.097 12.6 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 ACT domain EF-hand_13 PF17958.1 ORF105398 - 0.021 14.6 0.1 0.024 14.4 0.1 1.0 1 0 0 1 1 1 0 EF-hand domain SAS-6_N PF16531.5 ORF105398 - 0.043 14.4 0.3 0.07 13.7 0.3 1.5 1 1 0 1 1 1 0 Centriolar protein SAS N-terminal KIF1B PF12423.8 ORF105322 - 0.0013 19.1 0.2 0.0019 18.6 0.2 1.3 1 0 0 1 1 1 1 Kinesin protein 1B Tad PF13400.6 ORF104762 - 0.46 10.8 0.0 0.46 10.8 0.0 1.5 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like PRY PF13765.6 ORF10475 - 0.14 11.8 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 SPRY-associated domain Asp4 PF16996.5 ORF104372 - 0.0073 16.1 0.2 3 7.7 0.0 2.2 2 0 0 2 2 2 2 Accessory secretory protein Sec Asp4 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks393.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks393.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks393.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks393.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:31:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FTA4 PF13093.6 ORF104144 - 0.17 11.8 0.1 0.19 11.6 0.1 1.0 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 IF-2B PF01008.17 ORF104139 - 1.2e-07 31.3 0.0 1.3e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family YolD PF08863.10 ORF104040 - 0.087 12.9 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 YolD-like protein RTBV_P12 PF06361.11 ORF103643 - 0.08 13.4 0.2 0.08 13.4 0.2 1.1 1 0 0 1 1 1 0 Rice tungro bacilliform virus P12 protein DUF2963 PF11178.8 ORF103643 - 0.78 9.5 7.8 10 5.9 7.6 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2963) Nup188 PF10487.9 ORF103592 - 0.079 10.9 0.1 0.091 10.7 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin subcomplex protein binding to Pom34 DegT_DnrJ_EryC1 PF01041.17 ORF103592 - 0.13 11.5 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Vps16_C PF04840.12 ORF103356 - 0.031 13.3 0.0 0.031 13.3 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region Pkinase PF00069.25 ORF103293 - 7e-05 22.3 0.0 7.8e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF103293 - 0.061 12.6 0.0 0.069 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase DUF2633 PF11119.8 ORF10324 - 0.1 12.5 0.2 0.15 12.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) MSA-2c PF12238.8 ORF103063 - 2.7 7.9 6.5 2.9 7.9 6.5 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF2116 PF09889.9 ORF102887 - 0.075 13.0 0.0 0.096 12.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF4711 PF15829.5 ORF102844 - 0.0086 16.0 1.5 0.0095 15.9 1.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4711) MatE PF01554.18 ORF102039 - 1.2e-10 41.3 0.5 1.4e-10 41.1 0.5 1.0 1 0 0 1 1 1 1 MatE Macoilin PF09726.9 ORF101329 - 0.024 13.2 0.1 0.025 13.2 0.1 1.0 1 0 0 1 1 1 0 Macoilin family MMADHC PF10229.9 ORF101166 - 0.016 14.9 0.0 0.02 14.7 0.0 1.0 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein CDC4_D PF16856.5 ORF100934 - 0.0074 16.1 0.9 0.0096 15.8 0.9 1.3 1 1 0 1 1 1 1 Cell division control protein 4 dimerisation domain Fer2_BFD PF04324.15 ORF100930 - 1.2e-14 54.3 0.1 1.4e-14 54.1 0.1 1.1 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain Sugar_tr PF00083.24 ORF100911 - 1.2e-09 37.5 0.1 1.2e-09 37.5 0.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter COX1 PF00115.20 ORF100911 - 0.027 13.4 0.2 0.027 13.3 0.2 1.0 1 0 0 1 1 1 0 Cytochrome C and Quinol oxidase polypeptide I Ubie_methyltran PF01209.18 ORF100886 - 0.0043 16.4 0.0 0.0045 16.4 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 ORF100886 - 0.13 12.9 0.0 0.22 12.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DUF2254 PF10011.9 ORF100845 - 0.26 10.1 1.3 0.33 9.7 1.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Nop10p PF04135.12 ORF100628 - 6.8e-20 70.8 0.7 8.1e-20 70.6 0.7 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family Vps16_C PF04840.12 ORF10059 - 0.031 13.3 0.0 0.031 13.3 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region SR-25 PF10500.9 ORF100143 - 0.0021 17.7 24.3 0.0024 17.5 24.3 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein CCDC106 PF15794.5 ORF100143 - 0.25 11.0 18.0 0.3 10.8 18.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 PI3K_1B_p101 PF10486.9 ORF100143 - 0.41 8.4 6.7 0.37 8.5 6.7 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit NARP1 PF12569.8 ORF100143 - 1.3 7.8 13.7 1.4 7.7 13.7 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Med19 PF10278.9 ORF100143 - 2.9 7.8 19.5 3.3 7.6 19.5 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Sox_N PF12444.8 ORF100143 - 3.2 8.9 10.0 3.6 8.8 10.0 1.1 1 0 0 1 1 1 0 Sox developmental protein N terminal YqfQ PF14181.6 ORF100143 - 3.5 7.8 11.2 3.9 7.6 11.2 1.1 1 0 0 1 1 1 0 YqfQ-like protein Dehydrin PF00257.19 ORF100143 - 3.7 8.1 21.1 4.1 7.9 21.1 1.0 1 0 0 1 1 1 0 Dehydrin Connexin PF00029.19 ORF100143 - 3.8 7.2 9.3 3.7 7.2 9.3 1.0 1 0 0 1 1 1 0 Connexin Cytomega_UL84 PF06284.11 ORF100143 - 3.9 5.8 8.5 4.1 5.7 8.5 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Eapp_C PF10238.9 ORF100143 - 4 7.5 9.3 4.3 7.4 9.3 1.1 1 0 0 1 1 1 0 E2F-associated phosphoprotein FAM176 PF14851.6 ORF100143 - 4.9 6.8 6.6 5.2 6.7 6.6 1.1 1 0 0 1 1 1 0 FAM176 family Peptidase_S49_N PF08496.10 ORF100143 - 5.3 7.1 13.4 5.7 7.0 13.4 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal RPN2_C PF18004.1 ORF100143 - 5.3 6.9 15.3 5.8 6.8 15.3 1.0 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain DUF4614 PF15391.6 ORF100143 - 5.5 6.9 11.2 5.7 6.9 11.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) AP3D1 PF06375.11 ORF100143 - 5.8 7.1 20.1 7 6.9 20.1 1.3 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 RR_TM4-6 PF06459.12 ORF100143 - 6.2 6.6 11.2 6.1 6.6 11.2 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 RNA_pol_Rpc4 PF05132.14 ORF100143 - 7.1 7.0 11.7 7.2 7.0 11.7 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 Coilin_N PF15862.5 ORF100143 - 7.3 6.4 18.9 8.7 6.1 18.9 1.1 1 0 0 1 1 1 0 Coilin N-terminus DUF3464 PF11947.8 ORF100143 - 7.8 6.2 10.5 8.3 6.1 10.5 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Sec62 PF03839.16 ORF100143 - 8.7 5.8 9.1 9 5.7 9.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 MAP17 PF15807.5 ORF100143 - 8.7 6.6 10.3 9.6 6.5 10.3 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 CDC45 PF02724.14 ORF100143 - 9.3 4.4 13.1 9.7 4.3 13.1 1.0 1 0 0 1 1 1 0 CDC45-like protein OAD_gamma PF04277.13 ORF100143 - 9.9 6.8 6.3 12 6.6 6.3 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF3892 PF13031.6 NODE_85648_length_187_cov_0.789474_g77707_i0reverse_frame_1 - 0.058 14.0 0.3 0.065 13.9 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3892) Varsurf_PPLC PF03490.13 NODE_85647_length_187_cov_0.789474_g77706_i0forward_frame_1 - 0.16 11.9 0.4 0.23 11.4 0.4 1.2 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C DUF3915 PF13054.6 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_1 - 0.00051 20.0 0.5 0.00051 20.0 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_1 - 0.11 10.8 7.2 0.11 10.7 7.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family Cactin_mid PF10312.9 NODE_85640_length_187_cov_0.914474_g77699_i0forward_frame_1 - 0.0017 18.1 1.4 0.0017 18.1 1.4 1.0 1 0 0 1 1 1 1 Conserved mid region of cactin DUF1154 PF06631.11 NODE_85640_length_187_cov_0.914474_g77699_i0forward_frame_1 - 0.81 9.8 6.9 6.8 6.8 6.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1154) Fer4_6 PF12837.7 NODE_85637_length_187_cov_0.934211_g77696_i0forward_frame_1 - 1.2 9.3 6.3 0.43 10.8 1.1 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain SecIII_SopE_N PF05364.14 NODE_85635_length_187_cov_0.947368_g77694_i0forward_frame_1 - 0.16 12.1 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Laminin_EGF PF00053.24 NODE_85621_length_187_cov_1.019737_g77680_i0forward_frame_1 - 0.016 15.3 0.6 0.016 15.3 0.6 2.1 2 0 0 2 2 2 0 Laminin EGF domain Secretin PF00263.21 NODE_85609_length_187_cov_1.039474_g77668_i0forward_frame_1 - 0.076 12.7 0.0 0.095 12.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial type II and III secretion system protein Holin_BhlA PF10960.8 NODE_85605_length_187_cov_1.046053_g77664_i0reverse_frame_1 - 0.024 14.6 0.4 0.048 13.6 0.4 1.5 1 0 0 1 1 1 0 BhlA holin family V_ATPase_I PF01496.19 NODE_85605_length_187_cov_1.046053_g77664_i0reverse_frame_1 - 0.053 11.4 0.7 0.055 11.4 0.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DHR10 PF18595.1 NODE_85605_length_187_cov_1.046053_g77664_i0reverse_frame_1 - 0.15 12.2 0.1 0.17 12.0 0.1 1.1 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain zf_C2H2_13 PF18508.1 NODE_85604_length_187_cov_1.046053_g77663_i0reverse_frame_1 - 0.14 11.8 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Zinc finger domain CNOT1_HEAT_N PF16419.5 NODE_85601_length_187_cov_1.046053_g77660_i0forward_frame_1 - 0.024 14.3 1.1 0.027 14.1 1.1 1.0 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat Phage_holin_4_1 PF05105.12 NODE_85601_length_187_cov_1.046053_g77660_i0forward_frame_1 - 0.11 12.7 0.0 0.12 12.5 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage holin family MTP18 PF10558.9 NODE_85598_length_187_cov_1.046053_g77657_i0forward_frame_1 - 0.017 15.1 0.1 0.017 15.1 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial 18 KDa protein (MTP18) CUTL PF16557.5 NODE_85593_length_187_cov_1.046053_g77652_i0forward_frame_1 - 0.027 14.7 0.0 0.04 14.1 0.0 1.3 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB C1ORF64 PF15547.6 NODE_85582_length_187_cov_1.052632_g77641_i0reverse_frame_1 - 0.043 14.3 0.6 0.051 14.0 0.6 1.0 1 0 0 1 1 1 0 Steroid receptor-associated and regulated protein PBP1_TM PF14812.6 NODE_85579_length_187_cov_1.052632_g77638_i0forward_frame_1 - 0.0042 17.4 0.5 0.0051 17.2 0.5 1.1 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal CENP-B_dimeris PF09026.10 NODE_85579_length_187_cov_1.052632_g77638_i0forward_frame_1 - 0.0084 16.5 0.2 0.0084 16.5 0.2 1.1 1 0 0 1 1 1 1 Centromere protein B dimerisation domain zf-CCCH_6 PF18585.1 NODE_85572_length_187_cov_1.052632_g77631_i0forward_frame_1 - 0.01 15.7 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 NMN_transporter PF04973.12 NODE_85568_length_187_cov_1.052632_g77627_i0forward_frame_1 - 0.00031 20.8 2.7 0.00039 20.4 2.7 1.2 1 0 0 1 1 1 1 Nicotinamide mononucleotide transporter zf-RING_2 PF13639.6 NODE_85564_length_187_cov_1.052632_g77623_i0forward_frame_1 - 0.011 16.0 4.4 0.015 15.7 4.4 1.2 1 0 0 1 1 1 0 Ring finger domain DNA_pol_A_exoN PF18305.1 NODE_85560_length_187_cov_1.052632_g77619_i0forward_frame_1 - 0.033 14.5 0.0 0.039 14.2 0.0 1.1 1 0 0 1 1 1 0 3' to 5' exonuclease C-terminal domain Polyoma_agno PF01736.16 NODE_85555_length_187_cov_1.052632_g77614_i0forward_frame_1 - 0.086 12.6 1.6 0.1 12.3 0.6 1.7 2 1 0 2 2 2 0 Polyomavirus agnoprotein CBM_19 PF03427.13 NODE_85549_length_187_cov_1.052632_g77608_i0forward_frame_1 - 0.024 14.6 0.1 0.034 14.1 0.1 1.2 1 0 0 1 1 1 0 Carbohydrate binding domain (family 19) AvrM-A PF18241.1 NODE_85548_length_187_cov_1.052632_g77607_i0forward_frame_1 - 0.3 11.5 10.6 0.31 11.4 10.6 1.1 1 0 0 1 1 1 0 Flax-rust effector AvrM-A zf-RING_10 PF16685.5 NODE_85546_length_187_cov_1.052632_g77605_i0forward_frame_1 - 0.013 15.7 0.1 0.013 15.7 0.1 1.1 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-CCCH_6 PF18585.1 NODE_85520_length_187_cov_1.065789_g77579_i0reverse_frame_1 - 0.066 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 Antimicrobial18 PF08130.11 NODE_85518_length_187_cov_1.085526_g77577_i0forward_frame_1 - 0.24 11.5 1.5 1.5 8.9 1.2 1.9 1 1 1 2 2 2 0 Type A lantibiotic family NAD_binding_6 PF08030.12 NODE_85516_length_187_cov_1.098684_g77575_i0reverse_frame_1 - 0.00041 20.5 0.0 0.00046 20.3 0.0 1.0 1 0 0 1 1 1 1 Ferric reductase NAD binding domain Ribosomal_L37e PF01907.19 NODE_85514_length_187_cov_1.111842_g77573_i0forward_frame_1 - 0.018 15.2 0.6 0.025 14.7 0.6 1.2 1 0 0 1 1 1 0 Ribosomal protein L37e Subtilosin_A PF11420.8 NODE_85510_length_187_cov_1.125000_g77569_i0reverse_frame_1 - 0.085 12.8 0.1 5 7.2 0.1 2.4 2 0 0 2 2 2 0 Bacteriocin subtilosin A DUF2024 PF09630.10 NODE_85502_length_187_cov_1.144737_g77561_i0forward_frame_1 - 0.17 11.8 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) RHD_dimer PF16179.5 NODE_85494_length_187_cov_1.164474_g77553_i0reverse_frame_1 - 0.11 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Rel homology dimerisation domain PLA2G12 PF06951.11 NODE_85491_length_187_cov_1.184211_g77550_i0reverse_frame_1 - 0.11 12.4 2.2 0.1 12.5 2.2 1.1 1 0 0 1 1 1 0 Group XII secretory phospholipase A2 precursor (PLA2G12) Tombus_P19 PF03220.13 NODE_85490_length_187_cov_1.184211_g77549_i0forward_frame_1 - 0.15 11.7 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Tombusvirus P19 core protein UEV PF05743.13 NODE_85489_length_187_cov_1.184211_g77548_i0forward_frame_1 - 0.052 13.4 0.0 0.059 13.2 0.0 1.0 1 0 0 1 1 1 0 UEV domain PPR_2 PF13041.6 NODE_85487_length_187_cov_1.197368_g77546_i0reverse_frame_1 - 0.038 14.2 0.0 0.049 13.8 0.0 1.2 1 0 0 1 1 1 0 PPR repeat family PPR PF01535.20 NODE_85487_length_187_cov_1.197368_g77546_i0reverse_frame_1 - 0.19 12.1 0.0 0.29 11.5 0.0 1.3 1 0 0 1 1 1 0 PPR repeat MHC2-interact PF09307.10 NODE_85480_length_187_cov_1.230263_g77539_i0forward_frame_1 - 0.034 14.1 0.0 0.042 13.8 0.0 1.1 1 0 0 1 1 1 0 CLIP, MHC2 interacting COMP PF11598.8 NODE_85478_length_187_cov_1.230263_g77537_i0forward_frame_1 - 0.037 14.5 0.1 0.05 14.1 0.1 1.2 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein Hydantoinase_B PF02538.14 NODE_85476_length_187_cov_1.236842_g77535_i0forward_frame_1 - 0.39 9.1 3.8 0.45 8.9 3.8 1.0 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase Plasmod_dom_1 PF09715.10 NODE_85470_length_187_cov_1.269737_g77529_i0reverse_frame_1 - 0.081 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) IBB PF01749.20 NODE_85466_length_187_cov_1.296053_g77525_i0reverse_frame_1 - 0.083 13.3 0.9 0.088 13.3 0.9 1.1 1 0 0 1 1 1 0 Importin beta binding domain DUF4269 PF14091.6 NODE_85465_length_187_cov_1.302632_g77524_i0reverse_frame_1 - 0.069 13.4 0.0 0.083 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) Chorismate_synt PF01264.21 NODE_85464_length_187_cov_1.302632_g77523_i0forward_frame_1 - 3.2e-12 45.8 0.0 3.4e-12 45.7 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase DUF3099 PF11298.8 NODE_85463_length_187_cov_1.302632_g77522_i0reverse_frame_1 - 0.62 10.2 5.6 0.81 9.9 5.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3099) Strabismus PF06638.11 NODE_85463_length_187_cov_1.302632_g77522_i0reverse_frame_1 - 4.4 5.9 6.8 5.1 5.6 6.8 1.0 1 0 0 1 1 1 0 Strabismus protein DUF826 PF05696.11 NODE_85458_length_187_cov_1.315789_g77517_i0reverse_frame_1 - 0.34 11.0 3.3 0.39 10.8 1.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF826) Birna_VP2 PF01766.17 NODE_85440_length_187_cov_1.355263_g77499_i0forward_frame_1 - 0.15 11.0 0.0 0.15 11.0 0.0 1.0 1 0 0 1 1 1 0 Birnavirus VP2 protein Neurexophilin PF06312.12 NODE_85430_length_187_cov_1.407895_g77489_i0forward_frame_1 - 0.15 11.5 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Neurexophilin Sterile PF03015.19 NODE_85428_length_187_cov_1.421053_g77487_i0reverse_frame_1 - 0.099 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Male sterility protein Pox_D2 PF04701.13 NODE_85421_length_187_cov_1.434211_g77480_i0forward_frame_1 - 0.028 14.6 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Pox virus D2 protein Proteasome PF00227.26 NODE_85411_length_187_cov_1.480263_g77470_i0reverse_frame_1 - 5.3e-09 35.8 0.1 5.5e-09 35.8 0.1 1.0 1 0 0 1 1 1 1 Proteasome subunit EamA PF00892.20 NODE_85395_length_187_cov_1.546053_g77454_i0forward_frame_1 - 0.019 15.2 0.0 0.02 15.1 0.0 1.0 1 0 0 1 1 1 0 EamA-like transporter family DUF413 PF04219.12 NODE_85388_length_187_cov_1.565789_g77447_i0forward_frame_1 - 0.14 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF DivIC PF04977.15 NODE_85385_length_187_cov_1.572368_g77444_i0forward_frame_1 - 0.0014 18.4 2.2 0.0016 18.2 2.2 1.1 1 0 0 1 1 1 1 Septum formation initiator DUF726 PF05277.12 NODE_85372_length_187_cov_1.578947_g77431_i0forward_frame_1 - 0.17 10.8 0.0 0.18 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF726) SHIPPO-rpt PF07004.12 NODE_85365_length_187_cov_1.578947_g77424_i0forward_frame_1 - 0.033 15.1 0.7 0.05 14.5 0.7 1.3 1 0 0 1 1 1 0 Sperm-tail PG-rich repeat Arc_PepC_II PF06847.11 NODE_85353_length_187_cov_1.578947_g77412_i0reverse_frame_1 - 0.04 14.4 0.1 0.044 14.3 0.1 1.1 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II Pyrophosphatase PF00719.19 NODE_85353_length_187_cov_1.578947_g77412_i0reverse_frame_1 - 0.062 13.1 0.7 0.07 12.9 0.7 1.0 1 0 0 1 1 1 0 Inorganic pyrophosphatase Plant_tran PF04827.14 NODE_85348_length_187_cov_1.631579_g77407_i0forward_frame_1 - 0.046 13.3 0.1 0.051 13.2 0.1 1.0 1 0 0 1 1 1 0 Plant transposon protein HTH_26 PF13443.6 NODE_85347_length_187_cov_1.631579_g77406_i0reverse_frame_1 - 0.057 13.9 0.0 0.079 13.4 0.0 1.2 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF2688 PF10892.8 NODE_85341_length_187_cov_1.677632_g77400_i0forward_frame_1 - 0.046 13.2 0.1 0.051 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) DUF1722 PF08349.11 NODE_85340_length_187_cov_1.677632_g77399_i0reverse_frame_1 - 0.032 14.5 0.1 0.039 14.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) Methyltransf_23 PF13489.6 NODE_85329_length_187_cov_1.730263_g77388_i0reverse_frame_1 - 0.014 15.2 0.0 0.014 15.2 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_85329_length_187_cov_1.730263_g77388_i0reverse_frame_1 - 0.048 14.3 0.0 0.051 14.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_85329_length_187_cov_1.730263_g77388_i0reverse_frame_1 - 0.11 12.3 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain DUF2684 PF10885.8 NODE_85329_length_187_cov_1.730263_g77388_i0forward_frame_1 - 0.073 13.2 0.2 0.08 13.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Pox_F17 PF04767.12 NODE_85322_length_187_cov_1.756579_g77381_i0forward_frame_1 - 0.093 13.2 3.0 0.1 13.1 3.0 1.1 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein PALP PF00291.25 NODE_85321_length_187_cov_1.763158_g77380_i0reverse_frame_1 - 9e-10 38.4 0.1 9.7e-10 38.3 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF4832 PF16116.5 NODE_85304_length_187_cov_1.835526_g77363_i0reverse_frame_1 - 0.1 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4832) Pou PF00157.17 NODE_85304_length_187_cov_1.835526_g77363_i0forward_frame_1 - 0.073 13.0 0.3 0.092 12.7 0.3 1.2 1 0 0 1 1 1 0 Pou domain - N-terminal to homeobox domain DUF3306 PF11748.8 NODE_85293_length_187_cov_1.848684_g77352_i0forward_frame_1 - 0.11 13.4 0.0 0.12 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3306) SAS4 PF15460.6 NODE_85290_length_187_cov_1.855263_g77349_i0forward_frame_1 - 0.075 13.1 0.0 0.083 13.0 0.0 1.1 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 Endonuclea_NS_2 PF13930.6 NODE_85287_length_187_cov_1.901316_g77346_i0reverse_frame_1 - 0.073 13.2 1.5 0.083 13.0 1.5 1.0 1 0 0 1 1 1 0 DNA/RNA non-specific endonuclease COMM_domain PF07258.14 NODE_85286_length_187_cov_1.907895_g77345_i0reverse_frame_1 - 0.093 12.9 0.5 0.12 12.5 0.5 1.2 1 0 0 1 1 1 0 COMM domain Zds_C PF08632.10 NODE_85269_length_187_cov_2.098684_g77328_i0forward_frame_1 - 0.0068 16.1 0.4 0.011 15.5 0.4 1.4 1 0 0 1 1 1 1 Activator of mitotic machinery Cdc14 phosphatase activation C-term PCNA_N PF00705.18 NODE_85263_length_187_cov_2.111842_g77322_i0reverse_frame_1 - 8.6e-05 22.3 0.0 0.00011 21.9 0.0 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Phage_TAC_4 PF08748.11 NODE_85259_length_187_cov_2.177632_g77318_i0reverse_frame_1 - 0.015 15.6 0.2 0.017 15.5 0.2 1.0 1 0 0 1 1 1 0 Phage tail assembly chaperone DUF2153 PF09921.9 NODE_85246_length_187_cov_2.309211_g77305_i0forward_frame_1 - 0.032 14.0 0.1 0.032 14.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2153) DUF4915 PF16261.5 NODE_85244_length_187_cov_2.315789_g77303_i0forward_frame_1 - 0.09 12.0 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4915) Arm_vescicular PF18770.1 NODE_85238_length_187_cov_2.506579_g77297_i0forward_frame_1 - 0.06 13.3 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor DUF4528 PF15031.6 NODE_85237_length_187_cov_2.513158_g77296_i0reverse_frame_1 - 0.1 12.6 0.1 0.1 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) Kinesin PF00225.23 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 8.1e-15 54.6 0.2 8.1e-15 54.6 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 1.6e-10 41.1 0.1 1.7e-10 41.1 0.1 1.1 1 0 0 1 1 1 1 Microtubule binding DEAD PF00270.29 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.014 15.1 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase AAA_7 PF12775.7 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.04 13.4 0.1 0.041 13.4 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region Zeta_toxin PF06414.12 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.059 12.6 0.0 0.071 12.4 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin Bac_DnaA PF00308.18 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_16 PF13191.6 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.23 11.8 0.0 0.23 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain CBM9_1 PF06452.11 NODE_85222_length_187_cov_2.776316_g77281_i0reverse_frame_1 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate family 9 binding domain-like YycH PF07435.11 NODE_85217_length_187_cov_2.940789_g77276_i0reverse_frame_1 - 0.022 13.8 0.0 0.023 13.7 0.0 1.0 1 0 0 1 1 1 0 YycH protein COX8 PF02285.15 NODE_85217_length_187_cov_2.940789_g77276_i0reverse_frame_1 - 0.11 12.4 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII OSTbeta PF15048.6 NODE_85216_length_187_cov_3.032895_g77275_i0reverse_frame_1 - 0.049 13.8 0.7 0.064 13.4 0.7 1.4 1 1 0 1 1 1 0 Organic solute transporter subunit beta protein DUF3433 PF11915.8 NODE_85212_length_187_cov_3.171053_g77271_i0reverse_frame_1 - 0.09 13.2 1.8 0.096 13.2 1.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3433) SCFA_trans PF02667.14 NODE_85207_length_187_cov_3.651316_g77266_i0forward_frame_1 - 9.8e-26 90.7 0.5 1e-25 90.7 0.5 1.0 1 0 0 1 1 1 1 Short chain fatty acid transporter DUF4910 PF16254.5 NODE_85206_length_187_cov_3.828947_g77265_i0reverse_frame_1 - 0.16 10.8 0.0 0.16 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4910) RNA_pol_Rpb2_4 PF04566.13 NODE_85197_length_187_cov_7.967105_g77256_i0forward_frame_1 - 0.11 12.8 0.0 1.9 8.8 0.0 2.0 2 0 0 2 2 2 0 RNA polymerase Rpb2, domain 4 Response_reg PF00072.24 NODE_85189_length_187_cov_22.572368_g77248_i0reverse_frame_1 - 2e-09 37.6 0.0 2.4e-09 37.4 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain RP854 PF17460.2 NODE_85189_length_187_cov_22.572368_g77248_i0reverse_frame_1 - 0.078 12.7 0.1 0.082 12.7 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein RP854 TMF_DNA_bd PF12329.8 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 0.0062 16.5 15.3 0.0068 16.4 15.3 1.0 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding DUF2147 PF09917.9 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 0.064 13.9 5.7 0.075 13.7 5.7 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2147) DUF3450 PF11932.8 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 0.14 11.5 4.5 0.15 11.4 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF3987 PF13148.6 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 1.6 7.6 6.3 1.8 7.5 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) TMPIT PF07851.13 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 2.2 7.5 7.8 2.2 7.5 7.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF4407 PF14362.6 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 3.5 6.9 6.4 3.7 6.8 6.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4337 PF14235.6 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 4.4 7.4 9.2 1.9 8.6 7.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) Wound_ind PF08186.11 NODE_85181_length_187_cov_26.717105_g77240_i0forward_frame_1 - 0.061 13.8 0.2 0.11 12.9 0.2 1.4 1 0 0 1 1 1 0 Wound-inducible basic protein family TAF1D PF15333.6 NODE_85172_length_187_cov_30.565789_g77231_i0reverse_frame_1 - 0.043 13.6 4.9 0.048 13.4 4.9 1.0 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D Nodulin_late PF07127.11 NODE_85154_length_187_cov_45.440789_g77213_i0forward_frame_1 - 0.094 13.1 0.3 0.12 12.8 0.3 1.1 1 0 0 1 1 1 0 Late nodulin protein UPF0060 PF02694.15 NODE_85145_length_187_cov_52.651316_g77204_i0reverse_frame_1 - 0.12 12.6 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family Yippee-Mis18 PF03226.14 NODE_85139_length_187_cov_59.802632_g77198_i0reverse_frame_1 - 0.015 15.5 0.0 0.017 15.4 0.0 1.1 1 0 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly UPF0239 PF06783.11 NODE_85114_length_187_cov_163.434211_g77173_i0reverse_frame_1 - 0.022 14.9 1.0 0.025 14.7 1.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Lig_chan PF00060.26 NODE_85107_length_187_cov_244.493421_g77166_i0forward_frame_1 - 2.4 8.0 4.4 0.56 10.0 0.6 1.6 1 1 1 2 2 2 0 Ligand-gated ion channel Nodulin_late PF07127.11 NODE_85103_length_187_cov_4463.368421_g77162_i0reverse_frame_1 - 0.2 12.1 0.5 0.25 11.7 0.5 1.2 1 0 0 1 1 1 0 Late nodulin protein Lamprin PF06403.11 NODE_85102_length_188_cov_0.732026_g77161_i0forward_frame_1 - 0.018 15.0 6.6 0.022 14.7 6.6 1.3 1 0 0 1 1 1 0 Lamprin Phage_holin_2_1 PF04971.12 NODE_85100_length_188_cov_0.784314_g77159_i0forward_frame_1 - 0.085 12.9 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage P21 holin S Fer4_3 PF12798.7 NODE_85091_length_188_cov_0.941176_g77150_i0forward_frame_1 - 0.23 12.5 1.1 0.23 12.5 1.1 3.0 3 1 0 3 3 3 0 4Fe-4S binding domain FadA PF09403.10 NODE_85089_length_188_cov_0.947712_g77148_i0reverse_frame_1 - 0.027 15.0 4.1 0.031 14.7 4.1 1.0 1 0 0 1 1 1 0 Adhesion protein FadA AT_hook PF02178.19 NODE_85086_length_188_cov_0.960784_g77145_i0forward_frame_1 - 0.0071 16.1 0.7 0.0071 16.1 0.7 3.3 3 1 0 2 2 2 1 AT hook motif DUF438 PF04282.13 NODE_85085_length_188_cov_0.973856_g77144_i0forward_frame_1 - 0.062 13.3 0.3 0.08 12.9 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF438) F1F0-ATPsyn_F PF10791.9 NODE_85085_length_188_cov_0.973856_g77144_i0forward_frame_1 - 0.2 12.1 0.0 0.21 12.1 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial F1-F0 ATP synthase subunit F of fungi Ephrin_rec_like PF07699.13 NODE_85084_length_188_cov_0.993464_g77143_i0reverse_frame_1 - 1.7e-05 24.5 6.3 1.7e-05 24.5 6.3 2.1 2 0 0 2 2 2 1 Putative ephrin-receptor like NCD3G PF07562.14 NODE_85084_length_188_cov_0.993464_g77143_i0reverse_frame_1 - 0.18 11.8 10.1 0.29 11.1 8.2 2.0 1 1 1 2 2 2 0 Nine Cysteines Domain of family 3 GPCR DUF4713 PF15831.5 NODE_85083_length_188_cov_1.000000_g77142_i0forward_frame_1 - 0.23 11.9 4.7 0.31 11.5 4.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) DUF5032 PF16435.5 NODE_85078_length_188_cov_1.006536_g77137_i0reverse_frame_1 - 0.079 12.4 0.1 0.09 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5032) Head-tail_con PF12236.8 NODE_85074_length_188_cov_1.013072_g77133_i0forward_frame_1 - 0.14 10.5 0.1 0.16 10.4 0.1 1.0 1 0 0 1 1 1 0 Bacteriophage head to tail connecting protein HTH_32 PF13565.6 NODE_85072_length_188_cov_1.019608_g77131_i0reverse_frame_1 - 0.0013 19.3 0.1 0.0013 19.3 0.1 1.1 1 0 0 1 1 1 1 Homeodomain-like domain Mso1_C PF14477.6 NODE_85070_length_188_cov_1.026144_g77129_i0reverse_frame_1 - 0.084 13.3 0.3 0.084 13.3 0.3 2.2 2 0 0 2 2 2 0 Membrane-polarising domain of Mso1 Defensin_1 PF00323.19 NODE_85062_length_188_cov_1.039216_g77121_i0forward_frame_1 - 0.047 14.3 4.7 0.088 13.4 4.7 1.5 1 0 0 1 1 1 0 Mammalian defensin HNH_2 PF13391.6 NODE_85045_length_188_cov_1.039216_g77104_i0forward_frame_1 - 0.15 12.2 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 HNH endonuclease Ribonuc_red_lgC PF02867.15 NODE_85037_length_188_cov_1.045752_g77096_i0reverse_frame_1 - 6.3e-06 25.0 0.0 6.5e-06 25.0 0.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Herpes_UL25 PF01499.16 NODE_85037_length_188_cov_1.045752_g77096_i0reverse_frame_1 - 0.0089 14.6 0.0 0.0093 14.5 0.0 1.0 1 0 0 1 1 1 1 Herpesvirus UL25 family DUF3139 PF11337.8 NODE_85037_length_188_cov_1.045752_g77096_i0reverse_frame_1 - 0.092 13.4 0.1 0.098 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) Snf7 PF03357.21 NODE_85023_length_188_cov_1.045752_g77082_i0reverse_frame_1 - 0.058 13.0 7.9 0.067 12.8 7.9 1.0 1 0 0 1 1 1 0 Snf7 Swm2 PF17083.5 NODE_85018_length_188_cov_1.045752_g77077_i0forward_frame_1 - 0.13 12.3 0.2 0.14 12.2 0.2 1.1 1 0 0 1 1 1 0 Nucleolar protein Swm2 7TM_GPCR_Srw PF10324.9 NODE_85005_length_188_cov_1.045752_g77064_i0forward_frame_1 - 0.015 14.6 0.6 0.015 14.6 0.6 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srw Ycf1 PF05758.12 NODE_84994_length_188_cov_1.045752_g77053_i0reverse_frame_1 - 0.32 8.8 5.6 0.36 8.6 5.6 1.0 1 0 0 1 1 1 0 Ycf1 ArsA_HSP20 PF17886.1 NODE_84984_length_188_cov_1.045752_g77043_i0forward_frame_1 - 0.025 14.1 0.0 0.026 14.1 0.0 1.1 1 0 0 1 1 1 0 HSP20-like domain found in ArsA Pox_A32 PF04665.12 NODE_84979_length_188_cov_1.045752_g77038_i0forward_frame_1 - 0.0068 15.9 0.2 0.0073 15.8 0.2 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein KH_9 PF17904.1 NODE_84979_length_188_cov_1.045752_g77038_i0forward_frame_1 - 0.049 14.0 0.1 0.095 13.1 0.1 1.4 1 1 0 1 1 1 0 FMRP KH0 domain HEPN PF05168.14 NODE_84979_length_188_cov_1.045752_g77038_i0forward_frame_1 - 0.067 13.3 0.1 0.076 13.2 0.1 1.2 1 0 0 1 1 1 0 HEPN domain DUF3915 PF13054.6 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_1 - 0.043 13.8 0.7 0.043 13.8 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF4821 PF16092.5 NODE_84965_length_188_cov_1.098039_g77024_i0reverse_frame_1 - 0.031 13.9 2.8 0.033 13.8 2.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4821) Translat_reg PF01818.17 NODE_84937_length_188_cov_1.202614_g76996_i0reverse_frame_1 - 0.19 11.7 0.0 0.21 11.6 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage translational regulator YqzE PF14038.6 NODE_84935_length_188_cov_1.209150_g76994_i0reverse_frame_1 - 0.094 12.7 0.1 0.19 11.8 0.1 1.5 1 0 0 1 1 1 0 YqzE-like protein zf-nanos PF05741.13 NODE_84933_length_188_cov_1.215686_g76992_i0reverse_frame_1 - 0.1 12.9 2.0 0.72 10.1 1.0 2.0 1 1 1 2 2 2 0 Nanos RNA binding domain Uma2 PF05685.12 NODE_84932_length_188_cov_1.215686_g76991_i0forward_frame_1 - 0.18 11.4 0.0 0.2 11.2 0.0 1.0 1 0 0 1 1 1 0 Putative restriction endonuclease PAS_4 PF08448.10 NODE_84921_length_188_cov_1.235294_g76980_i0reverse_frame_1 - 0.067 13.4 0.0 0.11 12.8 0.0 1.3 1 1 0 1 1 1 0 PAS fold PAS PF00989.25 NODE_84921_length_188_cov_1.235294_g76980_i0reverse_frame_1 - 0.14 12.2 0.0 0.14 12.2 0.0 1.2 1 1 0 1 1 1 0 PAS fold MLTR_LBD PF17765.1 NODE_84921_length_188_cov_1.235294_g76980_i0reverse_frame_1 - 0.19 11.8 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks394.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks394.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks394.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks394.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SPACA9 PF15120.6 NODE_84904_length_188_cov_1.300654_g76963_i0forward_frame_1 - 0.095 12.5 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 Smim3 PF17307.2 NODE_84895_length_188_cov_1.307190_g76954_i0reverse_frame_1 - 0.0057 16.1 0.4 0.0088 15.5 0.4 1.3 1 1 0 1 1 1 1 Small integral membrane protein 3 RSN1_7TM PF02714.15 NODE_84890_length_188_cov_1.307190_g76949_i0reverse_frame_1 - 0.0038 16.6 0.5 0.0041 16.5 0.5 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate DUF2427 PF10348.9 NODE_84890_length_188_cov_1.307190_g76949_i0reverse_frame_1 - 0.061 13.1 0.1 0.069 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2427) CutA1 PF03091.15 NODE_84874_length_188_cov_1.405229_g76933_i0reverse_frame_1 - 0.13 12.1 1.4 0.14 12.1 1.4 1.0 1 0 0 1 1 1 0 CutA1 divalent ion tolerance protein Mating_N PF12731.7 NODE_84873_length_188_cov_1.405229_g76932_i0reverse_frame_1 - 0.05 13.7 0.1 0.05 13.7 0.1 1.2 1 0 0 1 1 1 0 Mating-type protein beta 1 AI-2E_transport PF01594.16 NODE_84873_length_188_cov_1.405229_g76932_i0reverse_frame_1 - 0.068 12.3 0.4 0.068 12.3 0.4 1.0 1 0 0 1 1 1 0 AI-2E family transporter HTH_Crp_2 PF13545.6 NODE_84873_length_188_cov_1.405229_g76932_i0forward_frame_1 - 0.022 14.8 0.0 0.022 14.7 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain GDPD PF03009.17 NODE_84858_length_188_cov_1.496732_g76917_i0forward_frame_1 - 7.7e-12 45.5 0.0 8.7e-12 45.3 0.0 1.1 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family PI-PLC-X PF00388.19 NODE_84858_length_188_cov_1.496732_g76917_i0forward_frame_1 - 0.034 13.7 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-specific phospholipase C, X domain RVT_2 PF07727.14 NODE_84845_length_188_cov_1.535948_g76904_i0forward_frame_1 - 8.1e-05 22.4 0.0 8.1e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) PRIMA1 PF16101.5 NODE_84844_length_188_cov_1.542484_g76903_i0reverse_frame_1 - 0.037 14.0 0.9 0.043 13.9 0.9 1.0 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 T3SS_TC PF06511.11 NODE_84834_length_188_cov_1.555556_g76893_i0forward_frame_1 - 0.013 15.0 0.0 0.013 14.9 0.0 1.0 1 0 0 1 1 1 0 Type III secretion systems tip complex components E1-E2_ATPase PF00122.20 NODE_84829_length_188_cov_1.562092_g76888_i0reverse_frame_1 - 6.6e-07 29.0 0.1 6.7e-07 29.0 0.1 1.0 1 0 0 1 1 1 1 E1-E2 ATPase TLC PF03219.14 NODE_84829_length_188_cov_1.562092_g76888_i0forward_frame_1 - 0.047 12.4 0.1 0.053 12.2 0.1 1.0 1 0 0 1 1 1 0 TLC ATP/ADP transporter Glft2_N PF17994.1 NODE_84827_length_188_cov_1.562092_g76886_i0reverse_frame_1 - 0.13 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Galactofuranosyltransferase 2 N-terminal DUF179 PF02622.15 NODE_84819_length_188_cov_1.568627_g76878_i0forward_frame_1 - 4.9e-10 39.6 0.0 5.4e-10 39.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 Papilloma_E5A PF05776.12 NODE_84804_length_188_cov_1.581699_g76863_i0forward_frame_1 - 0.38 11.1 7.7 0.59 10.5 7.7 1.4 1 1 0 1 1 1 0 Papillomavirus E5A protein ADH_zinc_N PF00107.26 NODE_84800_length_188_cov_1.601307_g76859_i0forward_frame_1 - 0.0058 16.6 0.1 0.006 16.6 0.1 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF4637 PF15470.6 NODE_84792_length_188_cov_1.673203_g76851_i0reverse_frame_1 - 0.19 11.4 0.7 0.22 11.3 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF4672 PF15716.5 NODE_84784_length_188_cov_1.718954_g76843_i0forward_frame_1 - 0.04 13.5 0.6 0.046 13.3 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) DUF4013 PF13197.6 NODE_84778_length_188_cov_1.751634_g76837_i0forward_frame_1 - 0.0026 17.6 0.4 0.0026 17.6 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4013) TMEM43 PF07787.12 NODE_84778_length_188_cov_1.751634_g76837_i0forward_frame_1 - 0.25 10.7 0.8 0.29 10.5 0.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 MipA PF06629.12 NODE_84773_length_188_cov_1.777778_g76832_i0forward_frame_1 - 0.038 14.3 0.0 0.043 14.1 0.0 1.1 1 0 0 1 1 1 0 MltA-interacting protein MipA DUF446 PF04287.12 NODE_84769_length_188_cov_1.790850_g76828_i0reverse_frame_1 - 0.083 13.0 0.1 0.099 12.7 0.1 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase C Catalase PF00199.19 NODE_84765_length_188_cov_1.810458_g76824_i0reverse_frame_1 - 4.6e-26 91.8 0.3 5.2e-26 91.7 0.3 1.0 1 0 0 1 1 1 1 Catalase Macoilin PF09726.9 NODE_84765_length_188_cov_1.810458_g76824_i0forward_frame_1 - 0.011 14.4 0.0 0.011 14.3 0.0 1.0 1 0 0 1 1 1 0 Macoilin family DUF3808 PF10300.9 NODE_84759_length_188_cov_1.823529_g76818_i0reverse_frame_1 - 0.054 12.2 0.0 0.054 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3808) DUF2726 PF10881.8 NODE_84758_length_188_cov_1.823529_g76817_i0reverse_frame_1 - 0.025 14.5 0.0 0.029 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2726) Fer4_12 PF13353.6 NODE_84754_length_188_cov_1.830065_g76813_i0forward_frame_1 - 0.022 15.1 0.4 0.022 15.0 0.4 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain Fer4_14 PF13394.6 NODE_84754_length_188_cov_1.830065_g76813_i0forward_frame_1 - 0.039 14.1 0.3 0.053 13.7 0.3 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain HET-S PF17108.5 NODE_84753_length_188_cov_1.843137_g76812_i0reverse_frame_1 - 0.15 11.8 0.1 0.32 10.8 0.1 1.5 1 0 0 1 1 1 0 N-terminal small S protein of HET, non-prionic CCDC-167 PF15188.6 NODE_84744_length_188_cov_1.954248_g76803_i0reverse_frame_1 - 0.00075 19.8 1.3 0.001 19.4 1.3 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 167 DUF3479 PF11965.8 NODE_84732_length_188_cov_2.032680_g76791_i0forward_frame_1 - 0.11 12.7 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3479) DUF5560 PF17715.1 NODE_84731_length_188_cov_2.032680_g76790_i0forward_frame_1 - 0.11 12.0 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5560) DUF4708 PF15813.5 NODE_84730_length_188_cov_2.058824_g76789_i0forward_frame_1 - 0.086 12.0 0.3 0.093 11.9 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4708) DUF1824 PF08854.10 NODE_84717_length_188_cov_2.183007_g76776_i0forward_frame_1 - 0.063 13.2 0.0 0.067 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1824) Cytokin_check_N PF10407.9 NODE_84712_length_188_cov_2.202614_g76771_i0reverse_frame_1 - 0.038 13.9 0.1 0.047 13.6 0.1 1.1 1 0 0 1 1 1 0 Cdc14 phosphatase binding protein N-terminus Keratin_2_head PF16208.5 NODE_84709_length_188_cov_2.281046_g76768_i0reverse_frame_1 - 0.15 12.2 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Keratin type II head HbrB PF08539.11 NODE_84705_length_188_cov_2.339869_g76764_i0forward_frame_1 - 0.11 12.5 0.2 0.11 12.5 0.2 1.2 1 0 0 1 1 1 0 HbrB-like Glyco_hydro_19 PF00182.19 NODE_84696_length_188_cov_2.464052_g76755_i0reverse_frame_1 - 0.0045 16.9 0.0 0.0047 16.9 0.0 1.0 1 0 0 1 1 1 1 Chitinase class I DUF5579 PF17742.1 NODE_84693_length_188_cov_2.490196_g76752_i0reverse_frame_1 - 0.25 10.9 0.7 0.25 10.9 0.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5579) DUF1338 PF07063.13 NODE_84692_length_188_cov_2.496732_g76751_i0reverse_frame_1 - 1.2e-05 24.7 0.0 1.6e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1338) PLDc_2 PF13091.6 NODE_84681_length_188_cov_2.653595_g76740_i0forward_frame_1 - 0.0034 17.3 0.0 0.0035 17.2 0.0 1.1 1 0 0 1 1 1 1 PLD-like domain RecO_C PF02565.15 NODE_84681_length_188_cov_2.653595_g76740_i0forward_frame_1 - 0.17 11.7 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Recombination protein O C terminal ASFV_p27 PF06556.11 NODE_84680_length_188_cov_2.679739_g76739_i0forward_frame_1 - 0.015 15.4 0.2 0.017 15.2 0.2 1.1 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus FlaG PF03646.15 NODE_84676_length_188_cov_2.849673_g76735_i0reverse_frame_1 - 0.17 12.1 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 FlaG protein OSR1_C PF12202.8 NODE_84673_length_188_cov_2.888889_g76732_i0forward_frame_1 - 0.011 15.9 0.0 0.014 15.6 0.0 1.1 1 0 0 1 1 1 0 Oxidative-stress-responsive kinase 1 C-terminal domain DUF3641 PF12345.8 NODE_84667_length_188_cov_3.071895_g76726_i0forward_frame_1 - 0.0075 16.3 0.1 0.0075 16.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3641) Meleagrin PF08189.11 NODE_84660_length_188_cov_3.176471_g76719_i0forward_frame_1 - 0.0015 18.2 2.0 0.0054 16.4 0.3 2.0 2 0 0 2 2 2 1 Meleagrin/Cygnin family Cyt-b5 PF00173.28 NODE_84659_length_188_cov_3.183007_g76718_i0reverse_frame_1 - 8.9e-10 38.6 0.0 1e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain ERGIC_N PF13850.6 NODE_84657_length_188_cov_3.320261_g76716_i0reverse_frame_1 - 0.069 13.5 0.6 0.085 13.2 0.6 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) WBP-1 PF11669.8 NODE_84656_length_188_cov_3.372549_g76715_i0forward_frame_1 - 0.033 14.8 0.0 0.036 14.7 0.0 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 Fibrinogen_aC PF12160.8 NODE_84655_length_188_cov_3.385621_g76714_i0reverse_frame_1 - 0.85 9.5 6.6 2.3 8.1 6.6 1.7 1 1 0 1 1 1 0 Fibrinogen alpha C domain DUF1314 PF07013.11 NODE_84652_length_188_cov_3.784314_g76711_i0forward_frame_1 - 0.14 12.0 0.0 0.16 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1314) Pro_dh-DNA_bdg PF14850.6 NODE_84649_length_188_cov_4.444444_g76708_i0forward_frame_1 - 0.13 12.8 0.0 0.17 12.4 0.0 1.2 1 0 0 1 1 1 0 DNA-binding domain of Proline dehydrogenase PP-binding PF00550.25 NODE_84645_length_188_cov_13.026144_g76704_i0reverse_frame_1 - 1.4e-05 25.4 0.2 1.9e-05 24.9 0.2 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site DUF1908 PF08926.11 NODE_84645_length_188_cov_13.026144_g76704_i0forward_frame_1 - 0.0089 15.1 1.5 0.009 15.1 1.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1908) Cytochrom_D1 PF02239.16 NODE_84641_length_188_cov_14.215686_g76700_i0forward_frame_1 - 0.15 10.6 0.0 0.17 10.4 0.0 1.0 1 0 0 1 1 1 0 Cytochrome D1 heme domain DUF2229 PF09989.9 NODE_84628_length_188_cov_29.339869_g76687_i0reverse_frame_1 - 8.6 5.9 11.5 9.4 5.8 11.5 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) Lustrin_cystein PF14625.6 NODE_84628_length_188_cov_29.339869_g76687_i0forward_frame_1 - 5.2 7.5 12.6 4.3 7.8 6.2 2.6 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain Tim54 PF11711.8 NODE_84623_length_188_cov_34.222222_g76682_i0reverse_frame_1 - 0.032 13.0 1.0 0.034 12.9 1.0 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 PTPA PF03095.15 NODE_84619_length_188_cov_35.392157_g76678_i0reverse_frame_1 - 0.033 13.6 0.0 0.034 13.6 0.0 1.0 1 0 0 1 1 1 0 Phosphotyrosyl phosphate activator (PTPA) protein Laminin_I PF06008.14 NODE_84613_length_188_cov_39.888889_g76672_i0forward_frame_1 - 0.15 11.8 0.0 0.16 11.6 0.0 1.0 1 0 0 1 1 1 0 Laminin Domain I DUF5463 PF17551.2 NODE_84605_length_188_cov_43.947712_g76664_i0reverse_frame_1 - 0.062 13.2 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5463) PDR_CDR PF06422.12 NODE_84605_length_188_cov_43.947712_g76664_i0forward_frame_1 - 0.19 11.7 0.3 0.22 11.5 0.3 1.1 1 0 0 1 1 1 0 CDR ABC transporter UBA PF00627.31 NODE_84604_length_188_cov_44.882353_g76663_i0forward_frame_1 - 0.019 14.8 0.0 0.094 12.6 0.0 1.9 2 0 0 2 2 2 0 UBA/TS-N domain SPACA9 PF15120.6 NODE_84600_length_188_cov_51.228758_g76659_i0reverse_frame_1 - 0.013 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 PRP38_assoc PF12871.7 NODE_84598_length_188_cov_55.189542_g76657_i0forward_frame_1 - 0.0057 17.2 25.4 0.0092 16.6 25.4 1.3 1 0 0 1 1 1 1 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Spt5_N PF11942.8 NODE_84598_length_188_cov_55.189542_g76657_i0forward_frame_1 - 0.048 14.7 8.0 0.052 14.5 8.0 1.0 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal Corona_nucleoca PF00937.18 NODE_84598_length_188_cov_55.189542_g76657_i0forward_frame_1 - 0.75 8.8 7.6 0.85 8.6 7.6 1.2 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein DUF1509 PF07420.11 NODE_84598_length_188_cov_55.189542_g76657_i0forward_frame_1 - 1 8.2 14.0 1.3 7.9 14.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) NAD_binding_7 PF13241.6 NODE_84583_length_188_cov_72.137255_g76642_i0reverse_frame_1 - 0.077 13.4 0.0 0.088 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative NAD(P)-binding ParA PF10609.9 NODE_84583_length_188_cov_72.137255_g76642_i0reverse_frame_1 - 0.13 11.7 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Cnd1_N PF12922.7 NODE_84570_length_188_cov_106.967320_g76629_i0reverse_frame_1 - 0.042 13.7 1.3 0.051 13.4 1.3 1.1 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term HicA_toxin PF07927.12 NODE_84563_length_188_cov_139.751634_g76622_i0reverse_frame_1 - 0.0056 16.7 0.5 0.0069 16.4 0.5 1.1 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, DUF736 PF05284.12 NODE_84552_length_188_cov_309.784314_g76611_i0forward_frame_1 - 0.19 11.6 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF736) ABC_membrane PF00664.23 NODE_84549_length_188_cov_433.836601_g76608_i0forward_frame_1 - 1.2e-10 41.5 0.1 1.2e-10 41.5 0.1 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region UCR_6-4kD PF08997.10 NODE_84549_length_188_cov_433.836601_g76608_i0forward_frame_1 - 0.032 14.1 0.3 0.048 13.6 0.3 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase complex, 6.4kD protein Aida_N PF08910.10 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_1 - 0.074 13.5 2.7 0.076 13.4 2.7 1.1 1 0 0 1 1 1 0 Aida N-terminus AP3D1 PF06375.11 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_1 - 0.47 10.7 10.1 0.51 10.6 10.1 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF4131 PF13567.6 NODE_84548_length_188_cov_448.464052_g76607_i0forward_frame_1 - 0.025 14.3 6.7 0.03 14.0 6.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) ABC2_membrane_3 PF12698.7 NODE_84548_length_188_cov_448.464052_g76607_i0forward_frame_1 - 0.88 8.6 8.7 1 8.4 8.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Fer2 PF00111.27 NODE_84542_length_188_cov_17682.483660_g76601_i0forward_frame_1 - 2.5e-12 46.6 0.5 2.8e-12 46.4 0.5 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain CA_like PF10563.9 NODE_84541_length_188_cov_23325.143791_g76600_i0forward_frame_1 - 0.02 14.8 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Putative carbonic anhydrase DUF5004 PF16395.5 NODE_84540_length_188_cov_59321.712418_g76599_i0reverse_frame_1 - 0.065 13.2 0.0 0.069 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5004) DUF2518 PF10726.9 NODE_84537_length_189_cov_0.766234_g76596_i0reverse_frame_1 - 0.081 12.6 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of function (DUF2518) PRIMA1 PF16101.5 NODE_84532_length_189_cov_0.896104_g76591_i0reverse_frame_1 - 0.12 12.4 4.3 0.13 12.3 4.3 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Kinesin PF00225.23 NODE_84512_length_189_cov_1.000000_g76571_i0forward_frame_1 - 0.00026 20.0 0.0 0.00026 20.0 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain DUF5357 PF17310.2 NODE_84502_length_189_cov_1.025974_g76561_i0reverse_frame_1 - 0.031 12.8 1.4 0.034 12.7 1.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) SeqA PF03925.13 NODE_84490_length_189_cov_1.032468_g76549_i0reverse_frame_1 - 0.013 15.4 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 0 SeqA protein C-terminal domain SDH_alpha PF03313.15 NODE_84482_length_189_cov_1.032468_g76541_i0forward_frame_1 - 0.014 15.0 0.0 0.016 14.9 0.0 1.0 1 0 0 1 1 1 0 Serine dehydratase alpha chain DUF3817 PF12823.7 NODE_84481_length_189_cov_1.032468_g76540_i0reverse_frame_1 - 0.043 14.6 0.5 0.045 14.6 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3817) SRP54 PF00448.22 NODE_84474_length_189_cov_1.032468_g76533_i0reverse_frame_1 - 0.1 12.2 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Shal-type PF11601.8 NODE_84466_length_189_cov_1.038961_g76525_i0forward_frame_1 - 0.084 12.4 1.5 0.52 9.9 0.1 2.4 3 0 0 3 3 3 0 Shal-type voltage-gated potassium channels, N-terminal DUF2484 PF10658.9 NODE_84458_length_189_cov_1.038961_g76517_i0forward_frame_1 - 0.0085 16.4 0.0 0.011 16.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2484) KSHV_K8 PF07188.11 NODE_84453_length_189_cov_1.038961_g76512_i0forward_frame_1 - 0.092 12.1 0.1 0.095 12.1 0.1 1.0 1 0 0 1 1 1 0 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein RVT_2 PF07727.14 NODE_84450_length_189_cov_1.038961_g76509_i0forward_frame_1 - 0.001 18.8 0.0 0.0011 18.7 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF2530 PF10745.9 NODE_84446_length_189_cov_1.038961_g76505_i0reverse_frame_1 - 0.0032 17.7 0.0 0.0041 17.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2530) Myosin_head PF00063.21 NODE_84442_length_189_cov_1.038961_g76501_i0reverse_frame_1 - 1.4e-05 23.5 0.0 1.6e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) DUF3302 PF11742.8 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.0035 17.4 0.2 0.0043 17.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3302) AA_permease_2 PF13520.6 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.014 14.2 0.1 0.015 14.1 0.1 1.0 1 0 0 1 1 1 0 Amino acid permease Baculo_11_kDa PF06143.11 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.02 14.4 0.3 0.025 14.1 0.3 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family DUF4834 PF16118.5 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.024 15.6 0.1 0.025 15.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.026 15.4 0.1 0.029 15.2 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain EMP70 PF02990.16 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.027 13.1 0.2 0.03 13.0 0.2 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 DUF4083 PF13314.6 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.046 13.7 0.4 0.059 13.3 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) ECSCR PF15820.5 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.11 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Mrr_cat PF04471.12 NODE_84434_length_189_cov_1.038961_g76493_i0reverse_frame_1 - 0.1 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease Lamprin PF06403.11 NODE_84429_length_189_cov_1.038961_g76488_i0forward_frame_1 - 0.0016 18.4 1.0 0.0017 18.3 1.0 1.2 1 0 0 1 1 1 1 Lamprin DUF5437 PF17505.2 NODE_84427_length_189_cov_1.038961_g76486_i0reverse_frame_1 - 0.061 13.4 0.5 1.1 9.3 0.0 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5437) RuvB_N PF05496.12 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 1.1e-06 28.5 0.0 1.2e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 1.1e-06 28.7 0.0 1.2e-06 28.6 0.0 1.0 1 0 0 1 1 1 1 Rad17 P-loop domain AAA PF00004.29 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 1.6e-05 25.4 0.5 3.5e-05 24.2 0.4 1.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF815 PF05673.13 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.00027 20.2 0.0 0.00027 20.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF815) ResIII PF04851.15 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.00041 20.4 0.0 0.00045 20.3 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit TIP49 PF06068.13 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.00067 19.0 0.0 0.00067 19.0 0.0 1.0 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_11 PF13086.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.00075 19.4 0.1 0.00086 19.2 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.0067 16.8 0.0 0.0078 16.6 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.0071 15.9 0.0 0.0085 15.6 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region RNA_helicase PF00910.22 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.0081 16.5 0.1 0.013 15.9 0.1 1.4 1 0 0 1 1 1 1 RNA helicase IstB_IS21 PF01695.17 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.021 14.6 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_30 PF13604.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.021 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.029 14.4 0.3 0.076 13.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Torsin PF06309.11 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.046 13.8 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Torsin Mg_chelatase PF01078.21 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.047 13.1 0.0 0.047 13.1 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI T2SSE PF00437.20 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.048 12.7 0.0 0.053 12.6 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein PIF1 PF05970.14 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.052 12.7 0.0 0.056 12.6 0.0 1.0 1 0 0 1 1 1 0 PIF1-like helicase AAA_24 PF13479.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.052 13.3 0.7 0.084 12.6 0.3 1.5 1 1 1 2 2 2 0 AAA domain TniB PF05621.11 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.055 12.9 0.0 0.059 12.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein AAA_19 PF13245.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.055 13.8 0.1 0.063 13.6 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.066 13.5 0.0 0.095 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain Kinesin PF00225.23 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.069 12.1 0.0 0.069 12.1 0.0 1.0 1 0 0 1 1 1 0 Kinesin motor domain AAA_22 PF13401.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.072 13.4 0.1 0.1 12.8 0.1 1.3 1 1 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.077 12.9 0.1 0.092 12.7 0.1 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DNA_pol3_delta2 PF13177.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.088 12.6 0.0 0.096 12.5 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III, delta subunit NB-ARC PF00931.22 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.11 11.7 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain PhoH PF02562.16 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.14 11.6 0.1 0.22 10.9 0.1 1.4 1 1 1 2 2 2 0 PhoH-like protein Bac_DnaA PF00308.18 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.15 11.9 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein FtsK_SpoIIIE PF01580.18 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.2 10.9 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family Hydin_ADK PF17213.3 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.21 11.8 0.2 0.29 11.4 0.2 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain Eclosion PF04736.12 NODE_84420_length_189_cov_1.038961_g76479_i0forward_frame_1 - 0.14 11.9 0.2 0.52 10.1 0.2 1.8 1 1 0 1 1 1 0 Eclosion hormone RITA PF17066.5 NODE_84409_length_189_cov_1.103896_g76468_i0forward_frame_1 - 0.052 13.1 0.0 0.052 13.1 0.0 1.0 1 0 0 1 1 1 0 RBPJ-interacting and tubulin associated protein DUF2719 PF10891.8 NODE_84405_length_189_cov_1.123377_g76464_i0forward_frame_1 - 0.094 12.6 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2719) DUF5579 PF17742.1 NODE_84393_length_189_cov_1.149351_g76452_i0reverse_frame_1 - 0.008 15.7 0.1 0.0093 15.5 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5579) DUF1397 PF07165.11 NODE_84393_length_189_cov_1.149351_g76452_i0reverse_frame_1 - 0.043 13.2 0.1 0.048 13.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1397) DUF809 PF05663.11 NODE_84388_length_189_cov_1.181818_g76447_i0forward_frame_1 - 0.31 11.2 0.9 0.33 11.1 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) C4bp_oligo PF18453.1 NODE_84377_length_189_cov_1.214286_g76436_i0forward_frame_1 - 0.12 12.6 0.1 0.17 12.1 0.1 1.2 1 0 0 1 1 1 0 Oligomerization domain of C4b-binding protein alpha DUF3666 PF12408.8 NODE_84373_length_189_cov_1.220779_g76432_i0reverse_frame_1 - 0.0018 17.4 0.1 0.0023 17.1 0.1 1.2 1 0 0 1 1 1 1 Ribose-5-phosphate isomerase Sbt_1 PF05982.12 NODE_84371_length_189_cov_1.227273_g76430_i0reverse_frame_1 - 0.04 13.2 0.4 0.043 13.1 0.4 1.0 1 0 0 1 1 1 0 Na+-dependent bicarbonate transporter superfamily ATG16 PF08614.11 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.0056 16.9 5.6 0.0063 16.8 5.6 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) VASP_tetra PF08776.11 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.0072 15.9 0.4 0.012 15.1 0.4 1.3 1 0 0 1 1 1 1 VASP tetramerisation domain Nup54 PF13874.6 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.019 15.1 5.1 0.02 15.0 5.1 1.0 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 SlyX PF04102.12 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.11 13.1 3.9 0.13 12.9 3.9 1.1 1 0 0 1 1 1 0 SlyX DUF922 PF06037.11 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.13 12.1 3.9 0.14 11.9 3.9 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) CENP-H PF05837.12 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.17 12.3 5.3 0.17 12.3 5.3 1.0 1 0 0 1 1 1 0 Centromere protein H (CENP-H) S_locus_glycop PF00954.20 NODE_84362_length_189_cov_1.272727_g76421_i0reverse_frame_1 - 0.011 16.3 0.3 0.012 16.1 0.3 1.1 1 0 0 1 1 1 0 S-locus glycoprotein domain DUF3304 PF11745.8 NODE_84362_length_189_cov_1.272727_g76421_i0forward_frame_1 - 0.15 12.5 0.2 0.16 12.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3304) CYSTM PF12734.7 NODE_84358_length_189_cov_1.279221_g76417_i0reverse_frame_1 - 0.029 14.7 2.7 0.077 13.3 2.4 1.7 2 0 0 2 2 2 0 Cysteine-rich TM module stress tolerance bZIP_1 PF00170.21 NODE_84338_length_189_cov_1.298701_g76397_i0reverse_frame_1 - 0.012 15.7 0.8 0.015 15.3 0.8 1.2 1 0 0 1 1 1 0 bZIP transcription factor Vpu PF00558.19 NODE_84338_length_189_cov_1.298701_g76397_i0reverse_frame_1 - 0.08 12.7 0.0 0.09 12.6 0.0 1.2 1 0 0 1 1 1 0 Vpu protein NDUF_B7 PF05676.13 NODE_84332_length_189_cov_1.305195_g76391_i0forward_frame_1 - 0.026 14.2 0.4 0.039 13.7 0.3 1.4 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Defensin_big PF14862.6 NODE_84329_length_189_cov_1.344156_g76388_i0reverse_frame_1 - 5 7.5 8.1 7 7.1 8.1 1.5 1 1 0 1 1 1 0 Big defensin LapA_dom PF06305.11 NODE_84329_length_189_cov_1.344156_g76388_i0forward_frame_1 - 0.14 12.0 2.1 0.13 12.1 1.6 1.3 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF4481 PF14800.6 NODE_84326_length_189_cov_1.363636_g76385_i0forward_frame_1 - 0.014 14.9 1.0 0.017 14.7 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) GAT PF03127.14 NODE_84318_length_189_cov_1.402597_g76377_i0forward_frame_1 - 0.081 13.2 0.1 0.12 12.7 0.1 1.3 1 0 0 1 1 1 0 GAT domain LAB_N PF07578.11 NODE_84317_length_189_cov_1.422078_g76376_i0reverse_frame_1 - 0.039 14.0 0.1 0.051 13.7 0.1 1.2 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain EAL PF00563.20 NODE_84312_length_189_cov_1.441558_g76371_i0forward_frame_1 - 3.7e-14 52.8 0.0 4e-14 52.7 0.0 1.0 1 0 0 1 1 1 1 EAL domain Ion_trans PF00520.31 NODE_84307_length_189_cov_1.461039_g76366_i0reverse_frame_1 - 0.034 13.4 0.2 0.034 13.4 0.2 1.1 1 0 0 1 1 1 0 Ion transport protein DUF2964 PF11177.8 NODE_84304_length_189_cov_1.487013_g76363_i0reverse_frame_1 - 0.15 12.2 0.1 0.19 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2964) UreE_N PF02814.15 NODE_84303_length_189_cov_1.493506_g76362_i0reverse_frame_1 - 0.067 12.8 1.0 0.085 12.5 1.0 1.2 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain PRIMA1 PF16101.5 NODE_84303_length_189_cov_1.493506_g76362_i0forward_frame_1 - 0.064 13.3 3.5 0.066 13.2 3.5 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_84303_length_189_cov_1.493506_g76362_i0forward_frame_1 - 0.45 9.9 3.8 0.45 10.0 3.8 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Reo_P9 PF06043.11 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_1 - 1.3 8.3 9.4 1.5 8.2 9.4 1.0 1 0 0 1 1 1 0 Reovirus P9-like family THB PF18362.1 NODE_84287_length_189_cov_1.538961_g76346_i0reverse_frame_1 - 0.1 12.2 0.4 0.2 11.3 0.4 1.5 1 0 0 1 1 1 0 Tri-helix bundle domain SopA PF13981.6 NODE_84283_length_189_cov_1.551948_g76342_i0forward_frame_1 - 0.0046 17.4 0.1 0.0058 17.1 0.1 1.1 1 0 0 1 1 1 1 SopA-like central domain Germane PF10646.9 NODE_84283_length_189_cov_1.551948_g76342_i0forward_frame_1 - 0.06 14.1 0.1 0.064 14.0 0.1 1.1 1 0 0 1 1 1 0 Sporulation and spore germination RAD51_interact PF15696.5 NODE_84278_length_189_cov_1.551948_g76337_i0reverse_frame_1 - 0.015 15.4 0.1 0.033 14.3 0.0 1.6 2 0 0 2 2 2 0 RAD51 interacting motif Pardaxin PF07425.11 NODE_84277_length_189_cov_1.551948_g76336_i0reverse_frame_1 - 0.11 12.1 1.2 0.2 11.3 1.2 1.4 1 0 0 1 1 1 0 Pardaxin Hum_adeno_E3A PF05393.11 NODE_84276_length_189_cov_1.551948_g76335_i0forward_frame_1 - 0.062 13.3 0.1 0.063 13.3 0.1 1.0 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein Herpes_UL69 PF05459.12 NODE_84273_length_189_cov_1.551948_g76332_i0forward_frame_1 - 0.15 11.3 0.9 0.2 10.9 0.9 1.1 1 0 0 1 1 1 0 Herpesvirus transcriptional regulator family OB_NTP_bind PF07717.16 NODE_84269_length_189_cov_1.558442_g76328_i0forward_frame_1 - 2.1e-08 34.4 0.1 2.3e-08 34.3 0.1 1.0 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Copine PF07002.16 NODE_84258_length_189_cov_1.558442_g76317_i0forward_frame_1 - 7.4e-07 28.8 0.0 8e-07 28.7 0.0 1.0 1 0 0 1 1 1 1 Copine MinE PF03776.14 NODE_84252_length_189_cov_1.584416_g76311_i0reverse_frame_1 - 0.11 12.5 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Septum formation topological specificity factor MinE DUF4085 PF13315.6 NODE_84252_length_189_cov_1.584416_g76311_i0reverse_frame_1 - 0.12 12.0 0.1 0.13 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4085) DUF1948 PF09185.10 NODE_84251_length_189_cov_1.590909_g76310_i0forward_frame_1 - 0.068 13.0 0.1 0.069 13.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1948) SelK_SelG PF10961.8 NODE_84231_length_189_cov_1.688312_g76290_i0reverse_frame_1 - 1.4 9.6 4.6 1.6 9.4 4.6 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG PAP2 PF01569.21 NODE_84212_length_189_cov_1.811688_g76271_i0reverse_frame_1 - 0.0009 19.0 0.0 0.00094 19.0 0.0 1.1 1 0 0 1 1 1 1 PAP2 superfamily AnkUBD PF18418.1 NODE_84203_length_189_cov_1.876623_g76262_i0forward_frame_1 - 0.2 11.9 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 Ankyrin ubiquitin-binding domain DUF4349 PF14257.6 NODE_84198_length_189_cov_1.909091_g76257_i0forward_frame_1 - 0.11 12.0 0.5 0.11 12.0 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Tissue_fac PF01108.17 NODE_84195_length_189_cov_1.915584_g76254_i0reverse_frame_1 - 0.036 13.9 0.4 0.036 13.9 0.4 1.0 1 0 0 1 1 1 0 Tissue factor COE1_DBD PF16422.5 NODE_84194_length_189_cov_1.922078_g76253_i0reverse_frame_1 - 0.12 11.8 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain Dscam_C PF12355.8 NODE_84186_length_189_cov_1.974026_g76245_i0forward_frame_1 - 0.21 12.6 1.1 0.21 12.5 1.1 1.2 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal DER1 PF04511.15 NODE_84176_length_189_cov_2.058442_g76235_i0reverse_frame_1 - 3e-11 43.6 4.4 3.2e-11 43.5 4.4 1.0 1 0 0 1 1 1 1 Der1-like family RAD51_interact PF15696.5 NODE_84175_length_189_cov_2.064935_g76234_i0reverse_frame_1 - 0.11 12.6 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 RAD51 interacting motif Kinesin PF00225.23 NODE_84171_length_189_cov_2.071429_g76230_i0forward_frame_1 - 2.4e-15 56.3 0.0 2.5e-15 56.3 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_84171_length_189_cov_2.071429_g76230_i0forward_frame_1 - 4.3e-09 36.5 0.1 4.7e-09 36.4 0.1 1.3 1 1 0 1 1 1 1 Microtubule binding LURAP PF14854.6 NODE_84169_length_189_cov_2.071429_g76228_i0forward_frame_1 - 0.094 12.7 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Leucine rich adaptor protein Ribosomal_L28 PF00830.19 NODE_84165_length_189_cov_2.071429_g76224_i0reverse_frame_1 - 0.091 13.0 0.2 0.098 12.9 0.2 1.1 1 0 0 1 1 1 0 Ribosomal L28 family zf_Hakai PF18408.1 NODE_84162_length_189_cov_2.077922_g76221_i0forward_frame_1 - 0.12 12.0 0.7 0.19 11.4 0.7 1.3 1 0 0 1 1 1 0 C2H2 Hakai zinc finger domain WYL_2 PF10902.8 NODE_84147_length_189_cov_2.207792_g76206_i0reverse_frame_1 - 0.037 14.4 0.2 0.041 14.2 0.2 1.2 1 0 0 1 1 1 0 WYL_2, Sm-like SH3 beta-barrel fold # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks395.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks395.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks395.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks395.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:21:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Herpes_UL6 PF01763.16 NODE_84132_length_189_cov_2.324675_g76191_i0forward_frame_1 - 0.028 12.9 0.3 0.03 12.9 0.3 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Phage_connect_1 PF05135.13 NODE_84132_length_189_cov_2.324675_g76191_i0forward_frame_1 - 0.03 14.8 0.7 0.032 14.7 0.7 1.1 1 0 0 1 1 1 0 Phage gp6-like head-tail connector protein zf-RVT PF13966.6 NODE_84131_length_189_cov_2.331169_g76190_i0forward_frame_1 - 0.0011 19.7 0.1 0.0012 19.5 0.1 1.1 1 0 0 1 1 1 1 zinc-binding in reverse transcriptase GAGA PF09237.11 NODE_84131_length_189_cov_2.331169_g76190_i0forward_frame_1 - 0.066 13.0 0.0 0.093 12.5 0.0 1.3 1 0 0 1 1 1 0 GAGA factor Ion_trans PF00520.31 NODE_84130_length_189_cov_2.337662_g76189_i0reverse_frame_1 - 0.00013 21.3 2.9 0.00014 21.2 2.9 1.0 1 0 0 1 1 1 1 Ion transport protein NAD_synthase PF02540.17 NODE_84115_length_189_cov_2.564935_g76174_i0forward_frame_1 - 0.038 13.1 0.2 0.043 12.9 0.2 1.0 1 0 0 1 1 1 0 NAD synthase DUF3606 PF12244.8 NODE_84114_length_189_cov_2.564935_g76173_i0reverse_frame_1 - 0.17 11.9 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3606) DUF5136 PF17199.4 NODE_84110_length_189_cov_2.629870_g76169_i0reverse_frame_1 - 0.32 10.7 0.1 0.32 10.7 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF5136) Borrelia_rep PF03183.13 NODE_84108_length_189_cov_2.688312_g76167_i0forward_frame_1 - 2.6 8.2 8.8 1.2 9.3 6.1 1.8 2 0 0 2 2 2 0 Borrelia repeat protein Siva PF05458.12 NODE_84106_length_189_cov_2.792208_g76165_i0reverse_frame_1 - 0.0014 18.3 1.0 0.0018 18.0 1.0 1.1 1 0 0 1 1 1 1 Cd27 binding protein (Siva) Fimbrial PF00419.20 NODE_84103_length_189_cov_2.850649_g76162_i0reverse_frame_1 - 0.0011 19.3 0.1 0.0012 19.1 0.1 1.0 1 0 0 1 1 1 1 Fimbrial protein DUF2087 PF09860.9 NODE_84101_length_189_cov_2.948052_g76160_i0reverse_frame_1 - 0.15 12.2 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) DEAD_2 PF06733.15 NODE_84096_length_189_cov_3.032468_g76155_i0forward_frame_1 - 0.1 12.2 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 DEAD_2 CotJB PF12652.7 NODE_84095_length_189_cov_3.038961_g76154_i0reverse_frame_1 - 0.08 13.2 0.2 0.088 13.0 0.2 1.2 1 0 0 1 1 1 0 CotJB protein TPR_11 PF13414.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 7.8e-21 73.5 4.0 2.3e-12 46.4 0.1 2.0 1 1 1 2 2 2 2 TPR repeat TPR_1 PF00515.28 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 1.8e-18 65.5 4.4 1.1e-10 40.8 0.2 3.0 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 6.9e-17 60.5 2.4 2.4e-09 36.9 0.3 2.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 2.4e-14 52.2 2.1 1.7e-08 34.0 0.0 3.0 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 1.6e-11 43.4 2.2 2.4e-07 30.4 0.2 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 7.8e-11 42.1 0.7 4.3e-05 23.7 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 3.1e-10 39.4 0.6 1e-07 31.4 0.0 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 1.4e-07 31.9 0.2 0.0029 18.1 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 8.3e-06 25.9 0.2 9.9e-06 25.7 0.2 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 1.1e-05 25.1 1.2 0.00013 21.7 0.1 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 4.3e-05 24.1 0.0 0.0014 19.3 0.0 1.9 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 9.7e-05 22.8 0.3 0.018 15.7 0.1 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.00056 20.5 0.0 0.003 18.3 0.0 1.8 1 1 1 2 2 2 1 Tetratricopeptide repeat TOM20_plant PF06552.12 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.011 15.5 0.0 1.2 8.8 0.0 2.0 1 1 1 2 2 2 0 Plant specific mitochondrial import receptor subunit TOM20 PPR PF01535.20 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.061 13.6 0.4 0.14 12.5 0.2 1.7 2 0 0 2 2 2 0 PPR repeat MIT PF04212.18 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.067 13.3 0.1 0.3 11.2 0.0 1.9 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain Phage_X PF05155.15 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.085 13.3 0.1 0.18 12.3 0.0 1.5 1 1 1 2 2 2 0 Phage X family Surfac_D-trimer PF09006.11 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.086 12.7 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Sel1 PF08238.12 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.6 10.9 4.0 11 6.8 0.5 3.2 3 1 0 3 3 3 0 Sel1 repeat FAF PF11250.8 NODE_84091_length_189_cov_3.220779_g76150_i0reverse_frame_1 - 0.0096 16.1 0.0 0.016 15.4 0.0 1.4 1 0 0 1 1 1 1 Fantastic Four meristem regulator HAMP PF00672.25 NODE_84085_length_189_cov_3.798701_g76144_i0reverse_frame_1 - 3.5e-11 43.3 0.3 3.9e-11 43.2 0.3 1.1 1 0 0 1 1 1 1 HAMP domain DEFB136 PF17333.2 NODE_84085_length_189_cov_3.798701_g76144_i0forward_frame_1 - 0.04 13.9 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 Beta defensin 136 DUF2315 PF10231.9 NODE_84067_length_189_cov_15.019481_g76126_i0reverse_frame_1 - 0.015 15.4 0.5 0.017 15.2 0.5 1.1 1 0 0 1 1 1 0 Apoptogenic protein 1 FoP_duplication PF13865.6 NODE_84062_length_189_cov_20.922078_g76121_i0reverse_frame_1 - 3.9 8.1 13.7 4.7 7.8 13.7 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 DUF1206 PF06724.11 NODE_84062_length_189_cov_20.922078_g76121_i0forward_frame_1 - 0.059 13.5 0.1 0.061 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) Ferlin_C PF16165.5 NODE_84057_length_189_cov_24.331169_g76116_i0reverse_frame_1 - 0.023 14.6 1.3 0.023 14.6 1.3 1.5 1 1 1 2 2 2 0 Ferlin C-terminus zf-C4_Topoisom PF01396.19 NODE_84051_length_189_cov_26.837662_g76110_i0forward_frame_1 - 0.072 12.9 0.2 0.097 12.5 0.2 1.2 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger NUC205 PF08168.11 NODE_84048_length_189_cov_29.058442_g76107_i0reverse_frame_1 - 0.074 12.6 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 NUC205 domain PDGF_N PF04692.13 NODE_84039_length_189_cov_33.857143_g76098_i0forward_frame_1 - 0.0033 18.2 0.0 0.0038 18.0 0.0 1.1 1 0 0 1 1 1 1 Platelet-derived growth factor, N terminal region EPO_TPO PF00758.18 NODE_84037_length_189_cov_36.681818_g76096_i0reverse_frame_1 - 0.047 13.7 0.1 0.05 13.6 0.1 1.1 1 0 0 1 1 1 0 Erythropoietin/thrombopoietin DUF4674 PF15719.5 NODE_84037_length_189_cov_36.681818_g76096_i0forward_frame_1 - 0.2 11.7 0.0 0.21 11.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4674) Herpes_UL56 PF04534.12 NODE_84034_length_189_cov_38.441558_g76093_i0forward_frame_1 - 10 5.6 10.7 11 5.4 10.7 1.1 1 0 0 1 1 1 0 Herpesvirus UL56 protein DUF5623 PF18536.1 NODE_84031_length_189_cov_39.344156_g76090_i0reverse_frame_1 - 0.068 13.5 0.0 0.079 13.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5623) DUF2770 PF10968.8 NODE_84031_length_189_cov_39.344156_g76090_i0forward_frame_1 - 0.13 12.2 0.2 0.17 11.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2770) ApoL PF05461.11 NODE_84015_length_189_cov_49.175325_g76074_i0forward_frame_1 - 0.023 14.0 0.2 0.023 14.0 0.2 1.0 1 0 0 1 1 1 0 Apolipoprotein L UPA_2 PF17809.1 NODE_84006_length_189_cov_60.889610_g76065_i0reverse_frame_1 - 0.023 14.5 0.0 0.025 14.4 0.0 1.1 1 0 0 1 1 1 0 UPA domain HSM3_C PF18794.1 NODE_84005_length_189_cov_68.811688_g76064_i0reverse_frame_1 - 0.053 13.1 0.2 0.061 12.9 0.2 1.0 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain DUF4487 PF14868.6 NODE_84003_length_189_cov_72.493506_g76062_i0reverse_frame_1 - 0.23 10.3 2.5 0.24 10.2 2.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4487) DUF2437 PF10370.9 NODE_83999_length_189_cov_82.006494_g76058_i0forward_frame_1 - 0.062 14.2 1.3 3.8 8.5 1.3 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF2437) DivIC PF04977.15 NODE_83995_length_189_cov_105.831169_g76054_i0forward_frame_1 - 0.15 11.8 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Septum formation initiator PPR_2 PF13041.6 NODE_83986_length_189_cov_176.844156_g76045_i0forward_frame_1 - 0.00049 20.2 0.0 0.00059 20.0 0.0 1.1 1 0 0 1 1 1 1 PPR repeat family PPR PF01535.20 NODE_83986_length_189_cov_176.844156_g76045_i0forward_frame_1 - 0.091 13.0 0.0 1.1 9.7 0.0 2.0 2 0 0 2 2 2 0 PPR repeat PPR_3 PF13812.6 NODE_83986_length_189_cov_176.844156_g76045_i0forward_frame_1 - 0.18 11.9 0.0 0.22 11.6 0.0 1.1 1 0 0 1 1 1 0 Pentatricopeptide repeat domain DUF4875 PF16175.5 NODE_83983_length_189_cov_225.311688_g76042_i0reverse_frame_1 - 0.054 13.6 0.1 0.064 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4875) DUF1980 PF09323.10 NODE_83979_length_189_cov_1092.071429_g76038_i0forward_frame_1 - 1.7 8.6 5.8 1.8 8.5 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) zf-CCCH PF00642.24 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.00016 21.5 4.3 0.00021 21.1 4.3 1.2 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.00023 20.9 0.8 0.00035 20.3 0.8 1.2 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.0011 19.0 2.4 0.0036 17.3 2.4 1.9 1 1 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.0049 17.6 1.1 0.0052 17.5 1.1 1.1 1 0 0 1 1 1 1 Torus domain zf-CCCH_2 PF14608.6 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.0069 16.8 0.9 0.0099 16.3 0.9 1.3 1 0 0 1 1 1 1 RNA-binding, Nab2-type zinc finger HTH_43 PF09904.9 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_2 - 0.1 12.6 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn helix FXa_inhibition PF14670.6 NODE_83975_length_190_cov_0.825806_g76034_i0forward_frame_2 - 1.4 9.3 8.8 0.96 9.8 5.5 2.0 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site ArfGap PF01412.18 NODE_83974_length_190_cov_0.832258_g76033_i0reverse_frame_3 - 2.9e-08 33.8 0.2 3.1e-08 33.7 0.2 1.1 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf Bromodomain PF00439.25 NODE_83971_length_190_cov_0.916129_g76030_i0forward_frame_3 - 2.1e-07 30.9 0.1 2.6e-07 30.6 0.1 1.2 1 0 0 1 1 1 1 Bromodomain TAXi_N PF14543.6 NODE_83952_length_190_cov_1.019355_g76011_i0reverse_frame_3 - 0.18 12.0 0.1 0.18 12.0 0.1 1.0 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal Adenylsucc_synt PF00709.21 NODE_83949_length_190_cov_1.019355_g76008_i0reverse_frame_2 - 2e-16 59.9 0.0 2.2e-16 59.8 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase DKNYY PF13644.6 NODE_83949_length_190_cov_1.019355_g76008_i0reverse_frame_2 - 0.025 15.4 0.1 0.026 15.3 0.1 1.1 1 0 0 1 1 1 0 DKNYY family Pheromone PF08015.11 NODE_83946_length_190_cov_1.025806_g76005_i0forward_frame_2 - 0.07 14.2 0.0 0.09 13.8 0.0 1.2 1 0 0 1 1 1 0 Fungal mating-type pheromone RPEL PF02755.15 NODE_83945_length_190_cov_1.025806_g76004_i0reverse_frame_2 - 0.029 14.1 0.4 0.029 14.1 0.4 1.8 2 0 0 2 2 2 0 RPEL repeat HEV_ORF1 PF02444.16 NODE_83945_length_190_cov_1.025806_g76004_i0reverse_frame_2 - 0.033 14.7 0.2 0.039 14.5 0.2 1.0 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) UL17 PF17640.2 NODE_83945_length_190_cov_1.025806_g76004_i0reverse_frame_2 - 0.13 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized UL17 FTR1 PF03239.14 NODE_83942_length_190_cov_1.025806_g76001_i0reverse_frame_3 - 0.02 14.1 0.0 0.021 14.0 0.0 1.0 1 0 0 1 1 1 0 Iron permease FTR1 family LPAM_2 PF13627.6 NODE_83931_length_190_cov_1.025806_g75990_i0forward_frame_2 - 0.011 15.5 1.4 0.017 15.0 1.4 1.3 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site SPG48 PF14764.6 NODE_83928_length_190_cov_1.025806_g75987_i0reverse_frame_2 - 0.045 14.2 0.0 0.05 14.1 0.0 1.1 1 0 0 1 1 1 0 AP-5 complex subunit, vesicle trafficking DUF2793 PF10983.8 NODE_83923_length_190_cov_1.032258_g75982_i0forward_frame_2 - 0.027 14.4 0.1 0.032 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2793) EGF_MSP1_1 PF12946.7 NODE_83913_length_190_cov_1.032258_g75972_i0forward_frame_2 - 0.15 12.1 8.9 1.4 9.0 2.4 2.9 2 1 0 2 2 2 0 MSP1 EGF domain 1 Protocadherin PF08374.11 NODE_83910_length_190_cov_1.032258_g75969_i0reverse_frame_2 - 1.9 8.4 4.1 1.9 8.4 4.1 1.1 1 0 0 1 1 1 0 Protocadherin Ac81 PF05820.11 NODE_83910_length_190_cov_1.032258_g75969_i0reverse_frame_2 - 3.2 7.3 11.4 3.6 7.1 11.4 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 ASFV_J13L PF05568.11 NODE_83910_length_190_cov_1.032258_g75969_i0reverse_frame_2 - 5.9 6.6 9.4 6.8 6.4 9.4 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein zf-RING_2 PF13639.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 5e-09 36.3 12.4 6e-09 36.1 12.4 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 3.3e-07 30.0 11.2 3.8e-07 29.8 11.2 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 6.1e-05 22.8 12.9 7.9e-05 22.4 12.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.00012 21.9 11.4 0.00016 21.5 11.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.0023 17.7 12.1 0.065 13.0 12.2 2.1 1 1 1 2 2 2 2 RING/Ubox like zinc-binding domain DUF4379 PF14311.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.0028 18.0 5.4 0.0033 17.8 5.4 1.2 1 0 0 1 1 1 1 Probable Zinc-ribbon domain zf-RING_5 PF14634.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.0064 16.4 11.5 0.008 16.1 11.5 1.1 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.065 13.1 11.5 0.45 10.4 11.8 1.9 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.16 12.1 12.2 1.1 9.5 12.3 2.0 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-rbx1 PF12678.7 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.22 11.9 10.4 0.79 10.1 10.4 1.7 1 1 0 1 1 1 0 RING-H2 zinc finger domain FYVE PF01363.21 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.64 10.2 10.9 1.5 9.0 10.8 1.7 1 1 0 1 1 1 0 FYVE zinc finger zf-B_box PF00643.24 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 1.4 9.1 12.3 0.7 10.1 6.9 2.2 2 1 0 2 2 2 0 B-box zinc finger zf-RING_11 PF17123.5 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 2.4 8.0 9.5 0.35 10.7 1.2 2.2 2 0 0 2 2 2 0 RING-like zinc finger zf-C4H2 PF10146.9 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 7.6 6.8 11.0 1.4 9.2 5.9 1.9 1 1 1 2 2 2 0 Zinc finger-containing protein MSA-2c PF12238.8 NODE_83898_length_190_cov_1.032258_g75957_i0reverse_frame_3 - 6.1 6.8 6.4 5.8 6.9 6.4 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c TPIP1 PF15338.6 NODE_83898_length_190_cov_1.032258_g75957_i0forward_frame_2 - 0.16 12.0 0.6 0.19 11.8 0.6 1.1 1 0 0 1 1 1 0 p53-regulated apoptosis-inducing protein 1 FixP_N PF14715.6 NODE_83889_length_190_cov_1.032258_g75948_i0forward_frame_2 - 0.21 11.4 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP zf-Mss51 PF13824.6 NODE_83887_length_190_cov_1.032258_g75946_i0reverse_frame_3 - 0.05 13.7 0.1 0.07 13.2 0.1 1.3 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 HapK PF11639.8 NODE_83887_length_190_cov_1.032258_g75946_i0forward_frame_3 - 0.18 12.3 0.1 0.21 12.1 0.1 1.1 1 0 0 1 1 1 0 REDY-like protein HapK DUF326 PF03860.16 NODE_83886_length_190_cov_1.032258_g75945_i0reverse_frame_2 - 0.039 13.9 0.4 0.045 13.7 0.4 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF326) PAAR_motif PF05488.13 NODE_83881_length_190_cov_1.032258_g75940_i0reverse_frame_3 - 0.046 13.9 0.1 0.059 13.6 0.1 1.2 1 0 0 1 1 1 0 PAAR motif NICE-1 PF15845.5 NODE_83881_length_190_cov_1.032258_g75940_i0forward_frame_3 - 0.081 13.7 3.5 0.083 13.7 3.5 1.1 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family Prenyltransf PF01255.19 NODE_83877_length_190_cov_1.032258_g75936_i0reverse_frame_2 - 2.1e-06 27.4 0.0 2.6e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase SCNM1_acidic PF15805.5 NODE_83877_length_190_cov_1.032258_g75936_i0reverse_frame_2 - 0.05 13.3 0.0 0.068 12.9 0.0 1.2 1 0 0 1 1 1 0 Acidic C-terminal region of sodium channel modifier 1 SCNM1 TT_ORF2 PF02957.15 NODE_83876_length_190_cov_1.032258_g75935_i0forward_frame_3 - 0.51 11.3 3.2 0.57 11.1 3.2 1.0 1 0 0 1 1 1 0 TT viral ORF2 DUF3649 PF12365.8 NODE_83873_length_190_cov_1.032258_g75932_i0forward_frame_2 - 0.71 9.6 3.1 19 5.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3649) Myb_CC_LHEQLE PF14379.6 NODE_83871_length_190_cov_1.032258_g75930_i0forward_frame_2 - 0.14 11.9 0.1 0.21 11.3 0.1 1.2 1 0 0 1 1 1 0 MYB-CC type transfactor, LHEQLE motif DUF3669 PF12417.8 NODE_83865_length_190_cov_1.058065_g75924_i0reverse_frame_3 - 0.19 12.0 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Zinc finger protein MpPF1 PF07668.11 NODE_83858_length_190_cov_1.083871_g75917_i0forward_frame_3 - 0.02 14.2 0.2 0.02 14.2 0.2 1.0 1 0 0 1 1 1 0 M penetrans paralogue family 1 DUF3767 PF12597.8 NODE_83856_length_190_cov_1.083871_g75915_i0reverse_frame_3 - 0.092 12.6 0.1 0.092 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) DUF2576 PF10845.8 NODE_83853_length_190_cov_1.083871_g75912_i0reverse_frame_3 - 0.14 11.7 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) TMPIT PF07851.13 NODE_83853_length_190_cov_1.083871_g75912_i0forward_frame_2 - 0.13 11.5 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF676 PF05057.14 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 2.4e-15 56.6 0.0 2.5e-15 56.6 0.0 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.0014 18.4 0.0 0.0014 18.4 0.0 1.1 1 0 0 1 1 1 1 PGAP1-like protein Hydrolase_4 PF12146.8 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.0058 15.9 0.0 0.0058 15.9 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Lipase_3 PF01764.25 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.012 15.5 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_6 PF12697.7 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.028 15.0 0.0 0.029 15.0 0.0 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase family Repressor_Mnt PF11423.8 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.042 13.6 0.5 3 7.7 0.1 2.2 2 0 0 2 2 2 0 Regulatory protein Mnt Abhydrolase_1 PF00561.20 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.071 12.7 0.0 0.091 12.4 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold HHH_2 PF12826.7 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.096 12.8 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF915 PF06028.11 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.11 11.8 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) Palm_thioest PF02089.15 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.15 11.9 0.0 0.15 11.9 0.0 1.0 1 0 0 1 1 1 0 Palmitoyl protein thioesterase Sh_2 PF17512.2 NODE_83850_length_190_cov_1.096774_g75909_i0forward_frame_3 - 0.036 13.8 0.3 0.041 13.7 0.3 1.1 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein CytadhesinP1 PF12378.8 NODE_83849_length_190_cov_1.103226_g75908_i0forward_frame_2 - 0.028 14.6 0.1 0.041 14.0 0.1 1.3 1 0 0 1 1 1 0 Trypsin-sensitive surface-exposed protein DUF5410 PF17422.2 NODE_83843_length_190_cov_1.129032_g75902_i0reverse_frame_3 - 0.033 13.5 0.0 0.033 13.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5410) DpnII PF04556.12 NODE_83841_length_190_cov_1.129032_g75900_i0reverse_frame_2 - 0.036 13.4 0.3 0.037 13.4 0.3 1.1 1 0 0 1 1 1 0 DpnII restriction endonuclease DUF4141 PF13605.6 NODE_83840_length_190_cov_1.129032_g75899_i0reverse_frame_2 - 0.094 12.0 2.2 0.15 11.3 2.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4141) Beta_helix PF13229.6 NODE_83838_length_190_cov_1.141935_g75897_i0reverse_frame_3 - 0.0001 22.2 0.6 0.0001 22.2 0.6 1.1 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_83838_length_190_cov_1.141935_g75897_i0reverse_frame_3 - 0.00051 19.4 0.3 0.00053 19.3 0.3 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Pardaxin PF07425.11 NODE_83825_length_190_cov_1.193548_g75884_i0forward_frame_2 - 1.7 8.3 6.6 4.3 7.0 0.5 2.2 2 0 0 2 2 2 0 Pardaxin TPKR_C2 PF16920.5 NODE_83815_length_190_cov_1.225806_g75874_i0reverse_frame_3 - 0.11 12.6 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Tyrosine-protein kinase receptor C2 Ig-like domain CBF_beta PF02312.17 NODE_83814_length_190_cov_1.225806_g75873_i0forward_frame_3 - 0.06 13.0 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 Core binding factor beta subunit SFTA2 PF15210.6 NODE_83813_length_190_cov_1.225806_g75872_i0reverse_frame_2 - 0.052 13.5 0.4 0.059 13.3 0.4 1.1 1 0 0 1 1 1 0 Surfactant-associated protein 2 Beta-TrCP_D PF12125.8 NODE_83802_length_190_cov_1.277419_g75861_i0forward_frame_3 - 0.0018 18.1 0.7 0.0018 18.1 0.7 1.8 2 0 0 2 2 2 1 D domain of beta-TrCP zf-CCHC_5 PF14787.6 NODE_83801_length_190_cov_1.277419_g75860_i0reverse_frame_3 - 0.05 13.3 0.6 0.099 12.4 0.1 1.7 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger Ferlin_C PF16165.5 NODE_83798_length_190_cov_1.283871_g75857_i0reverse_frame_2 - 0.0034 17.3 1.7 0.0037 17.2 1.7 1.0 1 0 0 1 1 1 1 Ferlin C-terminus MORN PF02493.20 NODE_83790_length_190_cov_1.283871_g75849_i0reverse_frame_3 - 8.8e-07 28.5 5.0 0.02 14.8 0.7 3.2 3 0 0 3 3 3 3 MORN repeat OATP PF03137.20 NODE_83784_length_190_cov_1.290323_g75843_i0forward_frame_2 - 0.015 13.6 0.7 0.016 13.6 0.7 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family DUF2206 PF09971.9 NODE_83784_length_190_cov_1.290323_g75843_i0forward_frame_2 - 0.053 12.3 1.6 0.058 12.1 1.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) FtsJ PF01728.19 NODE_83771_length_190_cov_1.335484_g75830_i0reverse_frame_3 - 1.9e-13 50.9 0.0 1.9e-13 50.9 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase DUF3149 PF11346.8 NODE_83769_length_190_cov_1.367742_g75828_i0reverse_frame_3 - 0.18 11.5 4.0 0.29 10.8 4.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3149) Noelin-1 PF12308.8 NODE_83757_length_190_cov_1.419355_g75816_i0forward_frame_2 - 0.0011 18.9 0.9 0.0011 18.9 0.9 1.1 1 0 0 1 1 1 1 Neurogenesis glycoprotein PAC2 PF09754.9 NODE_83756_length_190_cov_1.419355_g75815_i0reverse_frame_2 - 0.091 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 PAC2 family DUF658 PF04936.12 NODE_83756_length_190_cov_1.419355_g75815_i0forward_frame_2 - 0.014 15.2 0.0 0.015 15.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF658) VHL PF01847.16 NODE_83756_length_190_cov_1.419355_g75815_i0forward_frame_2 - 0.058 13.3 0.0 0.064 13.2 0.0 1.1 1 0 0 1 1 1 0 VHL beta domain FAM86 PF14904.6 NODE_83746_length_190_cov_1.458065_g75805_i0forward_frame_2 - 0.048 13.7 0.0 0.061 13.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function GPR_Gpa2_C PF11970.8 NODE_83745_length_190_cov_1.464516_g75804_i0forward_frame_3 - 0.028 14.5 0.6 0.043 13.9 0.6 1.3 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term MDFI PF15316.6 NODE_83742_length_190_cov_1.470968_g75801_i0reverse_frame_2 - 0.065 13.3 8.8 0.071 13.2 8.8 1.0 1 0 0 1 1 1 0 MyoD family inhibitor 3-alpha PF03475.14 NODE_83742_length_190_cov_1.470968_g75801_i0forward_frame_2 - 0.061 13.2 0.2 0.11 12.4 0.2 1.5 1 1 0 1 1 1 0 3-alpha domain GNAT_like PF18407.1 NODE_83741_length_190_cov_1.470968_g75800_i0reverse_frame_2 - 0.077 13.3 0.2 0.1 12.9 0.2 1.1 1 0 0 1 1 1 0 GCN5-related N-acetyltransferase like domain DUF1385 PF07136.11 NODE_83740_length_190_cov_1.470968_g75799_i0forward_frame_2 - 0.061 12.6 2.2 0.069 12.4 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) ABC_membrane PF00664.23 NODE_83736_length_190_cov_1.490323_g75795_i0reverse_frame_3 - 0.028 14.1 0.0 0.028 14.1 0.0 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region OGG_N PF07934.12 NODE_83736_length_190_cov_1.490323_g75795_i0reverse_frame_3 - 0.087 12.9 0.0 0.099 12.7 0.0 1.1 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain DUF2017 PF09438.10 NODE_83736_length_190_cov_1.490323_g75795_i0forward_frame_3 - 0.064 13.1 0.0 0.069 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2017) Hist_deacetyl PF00850.19 NODE_83733_length_190_cov_1.496774_g75792_i0reverse_frame_3 - 1.3e-06 28.1 0.0 1.4e-06 28.0 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Kazal_2 PF07648.15 NODE_83733_length_190_cov_1.496774_g75792_i0reverse_frame_3 - 0.086 13.0 0.6 0.086 13.0 0.6 1.9 1 1 1 2 2 2 0 Kazal-type serine protease inhibitor domain Dyp_perox PF04261.12 NODE_83730_length_190_cov_1.516129_g75789_i0reverse_frame_2 - 0.16 10.9 0.0 0.16 10.9 0.0 1.0 1 0 0 1 1 1 0 Dyp-type peroxidase family Gla PF00594.20 NODE_83726_length_190_cov_1.529032_g75785_i0reverse_frame_3 - 0.29 11.4 0.6 0.67 10.2 0.1 1.7 2 0 0 2 2 2 0 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain Palm_thioest PF02089.15 NODE_83725_length_190_cov_1.535484_g75784_i0forward_frame_3 - 2.7e-13 50.3 0.1 2.8e-13 50.3 0.1 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase HJURP_C PF12347.8 NODE_83722_length_190_cov_1.535484_g75781_i0forward_frame_2 - 0.058 13.4 0.3 0.08 13.0 0.3 1.2 1 0 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat DUF3716 PF12511.8 NODE_83721_length_190_cov_1.535484_g75780_i0forward_frame_3 - 0.17 11.9 7.1 0.21 11.6 7.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) YhdB PF14148.6 NODE_83720_length_190_cov_1.535484_g75779_i0forward_frame_3 - 0.0025 17.9 0.4 0.0031 17.6 0.4 1.2 1 0 0 1 1 1 1 YhdB-like protein DUF3500 PF12006.8 NODE_83715_length_190_cov_1.541935_g75774_i0reverse_frame_3 - 0.15 11.5 0.5 0.15 11.5 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3500) Fez1 PF06818.15 NODE_83711_length_190_cov_1.541935_g75770_i0forward_frame_2 - 0.014 15.8 1.6 0.016 15.7 1.6 1.2 1 0 0 1 1 1 0 Fez1 DivIC PF04977.15 NODE_83711_length_190_cov_1.541935_g75770_i0forward_frame_2 - 0.12 12.1 2.7 0.13 12.1 0.9 1.8 1 1 1 2 2 2 0 Septum formation initiator TSC22 PF01166.18 NODE_83711_length_190_cov_1.541935_g75770_i0forward_frame_2 - 0.18 12.1 3.4 1.1 9.7 0.1 2.3 1 1 0 2 2 2 0 TSC-22/dip/bun family E3_binding PF02817.17 NODE_83704_length_190_cov_1.548387_g75763_i0reverse_frame_2 - 0.096 13.1 0.6 0.88 10.0 0.1 2.0 2 0 0 2 2 2 0 e3 binding domain GIT1_C PF12205.8 NODE_83703_length_190_cov_1.548387_g75762_i0forward_frame_2 - 0.1 12.7 0.2 0.12 12.5 0.2 1.1 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term Trep_dent_lipo PF09710.10 NODE_83702_length_190_cov_1.548387_g75761_i0forward_frame_3 - 0.29 10.0 0.0 0.31 9.9 0.0 1.0 1 0 0 1 1 1 0 Treponema clustered lipoprotein (Trep_dent_lipo) Col_cuticle_N PF01484.17 NODE_83701_length_190_cov_1.548387_g75760_i0forward_frame_2 - 5 7.3 12.3 0.2 11.7 5.2 2.0 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain OAD_gamma PF04277.13 NODE_83700_length_190_cov_1.548387_g75759_i0reverse_frame_3 - 0.047 14.3 2.5 0.059 14.0 2.5 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain PBP1_TM PF14812.6 NODE_83700_length_190_cov_1.548387_g75759_i0reverse_frame_2 - 0.43 11.0 0.0 0.43 11.0 0.0 1.6 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal MafB19-deam PF14437.6 NODE_83695_length_190_cov_1.548387_g75754_i0forward_frame_3 - 0.0092 15.7 0.2 0.01 15.6 0.2 1.1 1 0 0 1 1 1 1 MafB19-like deaminase TOM6p PF15184.6 NODE_83694_length_190_cov_1.548387_g75753_i0forward_frame_2 - 0.1 12.4 0.3 0.11 12.2 0.3 1.1 1 0 0 1 1 1 0 Mitochondrial import receptor subunit TOM6 homolog CCDC92 PF14916.6 NODE_83693_length_190_cov_1.548387_g75752_i0forward_frame_3 - 0.042 13.6 0.3 0.071 12.9 0.3 1.3 1 0 0 1 1 1 0 Coiled-coil domain of unknown function Ribonuclease PF00545.20 NODE_83687_length_190_cov_1.548387_g75746_i0forward_frame_2 - 0.0064 17.2 0.0 0.0068 17.1 0.0 1.1 1 0 0 1 1 1 1 ribonuclease Alpha-amylase PF00128.24 NODE_83680_length_190_cov_1.612903_g75739_i0reverse_frame_3 - 2.2e-21 76.8 0.3 2.3e-21 76.7 0.3 1.0 1 0 0 1 1 1 1 Alpha amylase, catalytic domain DUF2759 PF10958.8 NODE_83675_length_190_cov_1.625806_g75734_i0forward_frame_3 - 0.02 14.6 0.0 0.035 13.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) DUF1398 PF07166.11 NODE_83674_length_190_cov_1.638710_g75733_i0reverse_frame_2 - 0.041 13.9 0.0 0.05 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) H2O2_YaaD PF03883.14 NODE_83669_length_190_cov_1.670968_g75728_i0reverse_frame_3 - 2e-23 83.1 0.1 2.1e-23 83.1 0.1 1.0 1 0 0 1 1 1 1 Peroxide stress protein YaaA DUF2332 PF10094.9 NODE_83668_length_190_cov_1.677419_g75727_i0forward_frame_3 - 0.18 11.3 0.1 0.18 11.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2332) Lipase_C PF18067.1 NODE_83668_length_190_cov_1.677419_g75727_i0forward_frame_2 - 0.011 16.3 0.0 0.012 16.1 0.0 1.1 1 0 0 1 1 1 0 Lipase C-terminal domain GAD-like PF08887.11 NODE_83667_length_190_cov_1.677419_g75726_i0forward_frame_2 - 0.13 12.1 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 GAD-like domain SASRP1 PF15160.6 NODE_83664_length_190_cov_1.703226_g75723_i0reverse_frame_2 - 0.13 11.9 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks396.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks396.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks396.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks396.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PRIMA1 PF16101.5 NODE_83663_length_190_cov_1.703226_g75722_i0forward_frame_2 - 0.35 10.9 3.8 0.39 10.8 3.8 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 UPF0220 PF05255.11 NODE_83662_length_190_cov_1.716129_g75721_i0reverse_frame_3 - 0.054 13.0 0.8 0.062 12.9 0.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) VASP_tetra PF08776.11 NODE_83662_length_190_cov_1.716129_g75721_i0reverse_frame_3 - 0.16 11.5 0.4 0.28 10.8 0.4 1.4 1 1 0 1 1 1 0 VASP tetramerisation domain EF-hand_2 PF09068.11 NODE_83657_length_190_cov_1.774194_g75716_i0reverse_frame_3 - 0.055 13.6 0.1 0.059 13.5 0.1 1.0 1 0 0 1 1 1 0 EF hand Mitoc_L55 PF09776.9 NODE_83655_length_190_cov_1.780645_g75714_i0reverse_frame_2 - 0.093 12.5 0.1 0.28 10.9 0.1 1.7 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L55 TrkH PF02386.16 NODE_83655_length_190_cov_1.780645_g75714_i0forward_frame_3 - 9.7e-16 57.3 0.0 1e-15 57.2 0.0 1.0 1 0 0 1 1 1 1 Cation transport protein HTH_45 PF14947.6 NODE_83652_length_190_cov_1.793548_g75711_i0forward_frame_2 - 0.037 14.0 0.5 0.14 12.2 0.5 1.8 1 1 0 1 1 1 0 Winged helix-turn-helix RVT_2 PF07727.14 NODE_83649_length_190_cov_1.800000_g75708_i0reverse_frame_2 - 0.14 11.8 0.2 0.13 11.8 0.2 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Lamprin PF06403.11 NODE_83645_length_190_cov_1.838710_g75704_i0forward_frame_3 - 0.00079 19.4 4.8 0.00084 19.3 4.8 1.2 1 0 0 1 1 1 1 Lamprin Sporozoite_P67 PF05642.11 NODE_83645_length_190_cov_1.838710_g75704_i0forward_frame_3 - 0.4 8.7 3.3 0.39 8.8 3.3 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Lamprin PF06403.11 NODE_83645_length_190_cov_1.838710_g75704_i0forward_frame_2 - 0.00019 21.4 2.1 0.00019 21.4 2.1 1.0 1 0 0 1 1 1 1 Lamprin Pox_A_type_inc PF04508.12 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.0016 18.2 2.2 0.35 10.8 0.1 2.3 2 0 0 2 2 2 2 Viral A-type inclusion protein repeat Dynamitin PF04912.14 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.0093 15.3 0.2 0.0096 15.3 0.2 1.1 1 0 0 1 1 1 1 Dynamitin Striatin PF08232.12 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.022 15.3 0.2 0.025 15.2 0.2 1.0 1 0 0 1 1 1 0 Striatin family ADIP PF11559.8 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.065 13.3 4.0 0.074 13.1 4.0 1.0 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding XhlA PF10779.9 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.27 11.5 2.0 0.32 11.2 2.0 1.1 1 0 0 1 1 1 0 Haemolysin XhlA M PF02370.16 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 1 10.1 10.2 6 7.8 1.8 2.5 2 1 0 2 2 2 0 M protein repeat HalX PF08663.10 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 3.1 8.2 7.6 10 6.5 1.6 2.0 1 1 1 2 2 2 0 HalX domain RCDG1 PF15725.5 NODE_83641_length_190_cov_1.864516_g75700_i0reverse_frame_2 - 0.4 11.1 4.2 0.25 11.8 3.1 1.3 1 1 0 1 1 1 0 Renal cancer differentiation gene 1 protein NifQ PF04891.12 NODE_83639_length_190_cov_1.890323_g75698_i0reverse_frame_3 - 0.032 14.6 0.1 0.033 14.5 0.1 1.0 1 0 0 1 1 1 0 NifQ Amelin PF05111.12 NODE_83634_length_190_cov_1.916129_g75693_i0reverse_frame_3 - 0.044 12.9 0.2 0.045 12.9 0.2 1.0 1 0 0 1 1 1 0 Ameloblastin precursor (Amelin) DUF2680 PF10925.8 NODE_83634_length_190_cov_1.916129_g75693_i0forward_frame_2 - 0.018 15.1 0.0 0.027 14.5 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2680) Lebercilin PF15619.6 NODE_83634_length_190_cov_1.916129_g75693_i0forward_frame_2 - 0.04 13.6 0.1 0.044 13.4 0.1 1.0 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease BLOC1_2 PF10046.9 NODE_83634_length_190_cov_1.916129_g75693_i0forward_frame_2 - 0.054 13.8 0.0 0.064 13.6 0.0 1.0 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Rabaptin PF03528.15 NODE_83633_length_190_cov_1.916129_g75692_i0forward_frame_3 - 0.032 12.9 0.3 0.032 12.9 0.3 1.0 1 0 0 1 1 1 0 Rabaptin PRANC PF09372.10 NODE_83629_length_190_cov_1.941935_g75688_i0reverse_frame_3 - 0.034 14.5 0.1 0.038 14.3 0.1 1.3 1 1 0 1 1 1 0 PRANC domain Shisa PF13908.6 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.0056 16.9 3.0 0.0061 16.8 3.0 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator CYYR1 PF10873.8 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.0069 16.9 1.3 0.0076 16.7 1.3 1.1 1 0 0 1 1 1 1 Cysteine and tyrosine-rich protein 1 PIRT PF15099.6 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.056 13.0 0.0 0.059 13.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Herpes_UL73 PF03554.13 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.083 12.9 3.1 0.1 12.6 3.1 1.1 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein DUF485 PF04341.12 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.091 12.7 0.1 0.097 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF485 TMEM154 PF15102.6 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.1 12.5 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family EphA2_TM PF14575.6 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.3 12.0 2.1 0.43 11.5 2.1 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain PfkB PF00294.24 NODE_83621_length_190_cov_1.993548_g75680_i0forward_frame_3 - 1.1e-12 47.8 0.1 1.3e-12 47.6 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Mucin PF01456.17 NODE_83614_length_190_cov_2.045161_g75673_i0reverse_frame_3 - 0.78 9.7 19.7 0.73 9.8 19.7 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF3439 PF11921.8 NODE_83614_length_190_cov_2.045161_g75673_i0reverse_frame_3 - 9.2 6.3 16.5 9.3 6.2 16.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) UMP1 PF05348.11 NODE_83613_length_190_cov_2.051613_g75672_i0reverse_frame_3 - 0.1 12.8 0.2 0.11 12.7 0.2 1.0 1 0 0 1 1 1 0 Proteasome maturation factor UMP1 Herpes_ICP4_C PF03585.14 NODE_83613_length_190_cov_2.051613_g75672_i0reverse_frame_2 - 0.011 14.4 0.2 0.013 14.3 0.2 1.0 1 0 0 1 1 1 0 Herpesvirus ICP4-like protein C-terminal region Mur_ligase PF01225.25 NODE_83607_length_190_cov_2.058065_g75666_i0reverse_frame_3 - 0.024 14.9 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 Mur ligase family, catalytic domain TPR_12 PF13424.6 NODE_83606_length_190_cov_2.064516_g75665_i0forward_frame_2 - 0.018 15.3 0.1 0.46 10.8 0.1 2.0 1 1 0 1 1 1 0 Tetratricopeptide repeat Spc7_C2 PF15577.6 NODE_83603_length_190_cov_2.090323_g75662_i0forward_frame_3 - 0.13 12.4 0.2 0.19 11.8 0.2 1.2 1 0 0 1 1 1 0 Spc7_C2 Gcd10p PF04189.13 NODE_83602_length_190_cov_2.096774_g75661_i0reverse_frame_2 - 0.062 12.4 0.3 0.065 12.3 0.3 1.0 1 0 0 1 1 1 0 Gcd10p family NADH_dehy_S2_C PF06444.11 NODE_83602_length_190_cov_2.096774_g75661_i0forward_frame_3 - 0.32 11.5 6.6 1.7 9.2 1.2 2.2 1 1 1 2 2 2 0 NADH dehydrogenase subunit 2 C-terminus DUF1422 PF07226.11 NODE_83594_length_190_cov_2.206452_g75653_i0forward_frame_2 - 0.0038 17.2 0.6 0.0047 16.9 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1422) Pkinase PF00069.25 NODE_83593_length_190_cov_2.232258_g75652_i0reverse_frame_2 - 2.1e-16 60.1 0.1 2.2e-16 60.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_83593_length_190_cov_2.232258_g75652_i0reverse_frame_2 - 1.3e-14 54.2 0.0 1.3e-14 54.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Retrotran_gag_2 PF14223.6 NODE_83592_length_190_cov_2.245161_g75651_i0reverse_frame_2 - 0.0041 16.8 0.0 0.0044 16.7 0.0 1.1 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type Choline_sulf_C PF12411.8 NODE_83592_length_190_cov_2.245161_g75651_i0reverse_frame_2 - 0.11 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Choline sulfatase enzyme C terminal PHZA_PHZB PF03284.13 NODE_83592_length_190_cov_2.245161_g75651_i0reverse_frame_2 - 0.15 11.7 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Phenazine biosynthesis protein A/B Pkinase PF00069.25 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 1.7e-18 66.9 0.1 1.8e-18 66.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 6.3e-07 28.9 0.0 6.3e-07 28.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Choline_kinase PF01633.20 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.00022 20.9 0.1 0.00025 20.7 0.1 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.00054 20.0 0.0 0.00061 19.8 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.0011 18.3 0.1 0.0013 18.1 0.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.0014 17.4 0.0 0.0015 17.4 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.003 16.6 0.0 0.0031 16.5 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.1 12.2 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 RIO1 family Ribosomal_L36e PF01158.18 NODE_83589_length_190_cov_2.270968_g75648_i0reverse_frame_2 - 0.052 13.8 7.1 0.072 13.3 7.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L36e Fes1 PF08609.10 NODE_83589_length_190_cov_2.270968_g75648_i0reverse_frame_2 - 0.054 14.4 3.1 0.056 14.3 3.1 1.0 1 0 0 1 1 1 0 Nucleotide exchange factor Fes1 DUF3824 PF12868.7 NODE_83589_length_190_cov_2.270968_g75648_i0reverse_frame_2 - 4.2 8.0 4.7 5 7.8 4.7 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) GlcNAc-1_reg PF18440.1 NODE_83586_length_190_cov_2.309677_g75645_i0reverse_frame_3 - 0.12 12.7 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative GlcNAc-1 phosphotransferase regulatory domain PetN PF03742.14 NODE_83576_length_190_cov_2.387097_g75635_i0reverse_frame_3 - 0.011 15.6 2.6 0.021 14.7 2.6 1.4 1 0 0 1 1 1 0 PetN FTHFS PF01268.19 NODE_83575_length_190_cov_2.406452_g75634_i0forward_frame_2 - 3.1e-23 81.8 0.0 3.3e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase MHCassoc_trimer PF08831.10 NODE_83572_length_190_cov_2.477419_g75631_i0reverse_frame_2 - 0.081 12.9 0.1 0.087 12.8 0.1 1.2 1 0 0 1 1 1 0 Class II MHC-associated invariant chain trimerisation domain BCS1_N PF08740.11 NODE_83566_length_190_cov_2.522581_g75625_i0forward_frame_2 - 0.029 14.3 0.2 0.037 14.0 0.2 1.0 1 0 0 1 1 1 0 BCS1 N terminal HlyIII PF03006.20 NODE_83565_length_190_cov_2.535484_g75624_i0reverse_frame_3 - 1.6e-06 28.0 1.2 2e-06 27.7 1.2 1.1 1 0 0 1 1 1 1 Haemolysin-III related Popeye PF04831.13 NODE_83561_length_190_cov_2.580645_g75620_i0reverse_frame_3 - 2.2 8.4 6.0 2.5 8.3 6.0 1.0 1 0 0 1 1 1 0 Popeye protein conserved region Gal-3-0_sulfotr PF06990.11 NODE_83549_length_190_cov_2.774194_g75608_i0forward_frame_3 - 0.046 12.6 0.2 0.049 12.5 0.2 1.0 1 0 0 1 1 1 0 Galactose-3-O-sulfotransferase UvrB PF12344.8 NODE_83546_length_190_cov_2.851613_g75605_i0reverse_frame_3 - 0.032 14.1 0.2 0.085 12.7 0.1 1.7 2 0 0 2 2 2 0 Ultra-violet resistance protein B Flexi_CP PF00286.20 NODE_83545_length_190_cov_2.916129_g75604_i0reverse_frame_2 - 0.12 12.3 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 Viral coat protein Cas_CXXC_CXXC PF09706.10 NODE_83545_length_190_cov_2.916129_g75604_i0forward_frame_3 - 0.13 12.5 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) Lamprin PF06403.11 NODE_83539_length_190_cov_3.154839_g75598_i0reverse_frame_2 - 0.44 10.5 12.5 3.2 7.7 2.4 2.0 1 1 1 2 2 2 0 Lamprin DUF5587 PF17825.1 NODE_83536_length_190_cov_3.393548_g75595_i0forward_frame_3 - 0.044 11.1 1.5 0.042 11.1 1.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5587) DUF3094 PF11293.8 NODE_83535_length_190_cov_3.458065_g75594_i0forward_frame_2 - 0.05 13.3 0.2 0.14 11.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) zf-CCCH_4 PF18044.1 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 0.0016 18.2 0.5 0.0024 17.6 0.5 1.3 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 0.0043 17.1 0.9 0.0067 16.4 0.9 1.3 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 0.01 15.8 0.2 0.015 15.2 0.2 1.3 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Torus PF16131.5 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 0.014 16.1 0.1 0.017 15.8 0.1 1.1 1 0 0 1 1 1 0 Torus domain DEAD_2 PF06733.15 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 0.071 12.7 0.3 0.08 12.6 0.3 1.1 1 0 0 1 1 1 0 DEAD_2 DUF4250 PF14056.6 NODE_83525_length_190_cov_5.341935_g75584_i0reverse_frame_3 - 0.054 13.5 0.4 0.084 12.8 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) Bse634I PF07832.11 NODE_83524_length_190_cov_5.464516_g75583_i0reverse_frame_2 - 0.025 13.9 0.8 0.027 13.8 0.8 1.0 1 0 0 1 1 1 0 Cfr10I/Bse634I restriction endonuclease Myco_arth_vir_N PF09610.10 NODE_83519_length_190_cov_17.393548_g75578_i0reverse_frame_2 - 1.9 8.6 7.6 2.6 8.2 7.6 1.2 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) RP854 PF17460.2 NODE_83512_length_190_cov_19.948387_g75571_i0forward_frame_2 - 0.21 11.3 6.8 0.21 11.3 6.8 1.2 1 0 0 1 1 1 0 Uncharacterized protein RP854 FixQ PF05545.11 NODE_83510_length_190_cov_21.270968_g75569_i0reverse_frame_2 - 8.6 6.4 9.9 12 5.9 9.9 1.2 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF4746 PF15928.5 NODE_83510_length_190_cov_21.270968_g75569_i0forward_frame_2 - 0.017 14.6 0.1 0.017 14.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Phi_1 PF04674.12 NODE_83510_length_190_cov_21.270968_g75569_i0forward_frame_2 - 0.029 13.7 0.0 0.029 13.7 0.0 1.1 1 0 0 1 1 1 0 Phosphate-induced protein 1 conserved region zf-ZPR1 PF03367.13 NODE_83508_length_190_cov_24.174194_g75567_i0reverse_frame_3 - 0.078 12.8 0.0 0.08 12.8 0.0 1.1 1 0 0 1 1 1 0 ZPR1 zinc-finger domain TORC_M PF12885.7 NODE_83508_length_190_cov_24.174194_g75567_i0forward_frame_3 - 0.062 13.2 0.0 0.071 13.0 0.0 1.0 1 0 0 1 1 1 0 Transducer of regulated CREB activity middle domain DUF4914 PF16260.5 NODE_83507_length_190_cov_25.264516_g75566_i0forward_frame_2 - 0.13 10.4 0.1 0.13 10.3 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4914) Levi_coat PF01819.17 NODE_83505_length_190_cov_27.741935_g75564_i0reverse_frame_2 - 0.067 13.2 0.1 0.075 13.0 0.1 1.0 1 0 0 1 1 1 0 Levivirus coat protein Secapin PF17521.2 NODE_83499_length_190_cov_30.006452_g75558_i0forward_frame_2 - 0.01 15.6 1.3 0.01 15.6 1.3 1.6 1 1 1 2 2 2 0 Honey bee peptides aGPT-Pplase1 PF18723.1 NODE_83498_length_190_cov_31.193548_g75557_i0forward_frame_3 - 0.0035 16.8 0.0 0.0035 16.8 0.0 1.1 1 0 0 1 1 1 1 alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 1 UCMA PF17085.5 NODE_83495_length_190_cov_31.535484_g75554_i0reverse_frame_3 - 0.12 12.4 12.7 0.12 12.3 12.7 1.0 1 0 0 1 1 1 0 Unique cartilage matrix associated protein DUF4337 PF14235.6 NODE_83495_length_190_cov_31.535484_g75554_i0reverse_frame_3 - 0.7 10.0 6.2 0.77 9.9 6.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DNA_pol3_a_NII PF11490.8 NODE_83495_length_190_cov_31.535484_g75554_i0reverse_frame_3 - 2 8.3 9.2 2.5 8.0 9.2 1.3 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II Il13Ra_Ig PF18001.1 NODE_83491_length_190_cov_34.509677_g75550_i0forward_frame_2 - 0.077 13.1 0.1 0.096 12.8 0.1 1.1 1 0 0 1 1 1 0 Interleukin-13 receptor subunit alpha Ig-like domain Oxidored_q5_N PF01059.17 NODE_83488_length_190_cov_35.651613_g75547_i0forward_frame_3 - 0.034 14.2 4.5 0.037 14.1 4.5 1.0 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus MPS-4 PF17523.2 NODE_83488_length_190_cov_35.651613_g75547_i0forward_frame_2 - 0.27 11.4 6.4 0.3 11.3 6.4 1.1 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Histone_H2A_C PF16211.5 NODE_83486_length_190_cov_36.322581_g75545_i0forward_frame_3 - 2.5 7.9 5.5 3.8 7.3 5.5 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A zf-FLZ PF04570.14 NODE_83479_length_190_cov_40.606452_g75538_i0reverse_frame_2 - 0.031 13.8 0.8 0.13 11.7 0.3 1.9 2 0 0 2 2 2 0 zinc-finger of the FCS-type, C2-C2 DUF1899 PF08953.11 NODE_83479_length_190_cov_40.606452_g75538_i0forward_frame_3 - 0.074 12.9 0.0 0.093 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1899) PspB PF06667.12 NODE_83478_length_190_cov_41.045161_g75537_i0reverse_frame_2 - 0.28 11.3 2.5 0.59 10.2 2.5 1.7 1 1 0 1 1 1 0 Phage shock protein B Cpn10 PF00166.21 NODE_83472_length_190_cov_45.329032_g75531_i0forward_frame_2 - 0.055 13.5 0.0 0.055 13.5 0.0 1.0 1 0 0 1 1 1 0 Chaperonin 10 Kd subunit FAM117 PF15388.6 NODE_83470_length_190_cov_47.580645_g75529_i0reverse_frame_3 - 0.027 13.9 0.0 0.027 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein Family FAM117 RRM_1 PF00076.22 NODE_83468_length_190_cov_51.051613_g75527_i0reverse_frame_3 - 0.024 14.5 0.1 0.034 14.0 0.1 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GCP_C_terminal PF04130.13 NODE_83466_length_190_cov_53.354839_g75525_i0forward_frame_3 - 0.021 14.3 0.1 0.021 14.3 0.1 1.1 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal ADD_DNMT3 PF17980.1 NODE_83465_length_190_cov_53.406452_g75524_i0forward_frame_3 - 0.016 15.2 0.8 0.022 14.7 0.8 1.2 1 0 0 1 1 1 0 Cysteine rich ADD domain in DNMT3 TMEM234 PF10639.9 NODE_83457_length_190_cov_66.322581_g75516_i0reverse_frame_2 - 0.2 11.7 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 Putative transmembrane family 234 TPR_9 PF13371.6 NODE_83457_length_190_cov_66.322581_g75516_i0forward_frame_2 - 0.11 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF5436 PF17504.2 NODE_83454_length_190_cov_73.225806_g75513_i0reverse_frame_3 - 1.4 9.3 4.7 6.1 7.2 4.7 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5436) TMEM154 PF15102.6 NODE_83451_length_190_cov_80.154839_g75510_i0reverse_frame_3 - 0.25 11.2 1.1 0.28 11.1 1.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family Ceramidase PF05875.12 NODE_83450_length_190_cov_81.496774_g75509_i0forward_frame_3 - 0.048 13.1 0.0 0.048 13.1 0.0 1.0 1 0 0 1 1 1 0 Ceramidase YmgB PF10798.8 NODE_83448_length_190_cov_88.490323_g75507_i0reverse_frame_3 - 0.018 14.9 0.1 0.041 13.7 0.0 1.5 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR DUF4817 PF16087.5 NODE_83448_length_190_cov_88.490323_g75507_i0reverse_frame_2 - 0.17 11.7 1.7 0.17 11.7 0.9 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain (DUF4817) DUF4547 PF15080.6 NODE_83447_length_190_cov_88.806452_g75506_i0forward_frame_2 - 0.34 10.5 2.2 0.36 10.4 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4547) DUF3578 PF12102.8 NODE_83444_length_190_cov_108.490323_g75503_i0reverse_frame_3 - 0.036 13.6 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3578) KELK PF15796.5 NODE_83442_length_190_cov_116.187097_g75501_i0reverse_frame_2 - 0.029 14.8 0.7 0.033 14.6 0.7 1.2 1 0 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF2063 PF09836.9 NODE_83439_length_190_cov_186.116129_g75498_i0reverse_frame_2 - 0.093 13.0 0.5 0.11 12.7 0.5 1.1 1 0 0 1 1 1 0 Putative DNA-binding domain zf_C2H2_ZHX PF18387.1 NODE_83437_length_190_cov_242.593548_g75496_i0forward_frame_3 - 0.077 12.6 0.6 0.12 12.1 0.3 1.5 2 0 0 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain Tmemb_161AB PF10268.9 NODE_83435_length_190_cov_277.851613_g75494_i0reverse_frame_2 - 0.11 11.1 0.5 0.12 11.0 0.5 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB PHD PF00628.29 NODE_83431_length_191_cov_0.839744_g75490_i0forward_frame_3 - 0.0065 16.3 7.8 0.014 15.3 7.8 1.6 1 1 1 2 2 2 1 PHD-finger zf-B_box PF00643.24 NODE_83431_length_191_cov_0.839744_g75490_i0forward_frame_3 - 0.35 11.1 9.0 0.48 10.6 9.0 1.3 1 0 0 1 1 1 0 B-box zinc finger Glyco_hydro_1 PF00232.18 NODE_83417_length_191_cov_0.987179_g75476_i0forward_frame_3 - 0.21 10.0 0.0 0.24 9.8 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 1 FXR_C1 PF16096.5 NODE_83414_length_191_cov_1.012821_g75473_i0reverse_frame_3 - 0.034 14.3 0.2 0.034 14.3 0.2 1.4 2 0 0 2 2 2 0 Fragile X-related 1 protein C-terminal region 2 I-set PF07679.16 NODE_83414_length_191_cov_1.012821_g75473_i0reverse_frame_3 - 0.089 12.9 0.0 0.089 12.9 0.0 1.1 1 0 0 1 1 1 0 Immunoglobulin I-set domain TOBE_2 PF08402.10 NODE_83414_length_191_cov_1.012821_g75473_i0reverse_frame_2 - 0.16 12.2 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 TOBE domain CaMBD PF02888.16 NODE_83409_length_191_cov_1.019231_g75468_i0forward_frame_3 - 0.065 13.4 0.2 0.085 13.0 0.2 1.2 1 0 0 1 1 1 0 Calmodulin binding domain Bac_surface_Ag PF01103.23 NODE_83404_length_191_cov_1.019231_g75463_i0forward_frame_3 - 1.3e-07 31.5 0.0 1.3e-07 31.5 0.0 1.0 1 0 0 1 1 1 1 Surface antigen CTV_P33 PF07184.11 NODE_83399_length_191_cov_1.019231_g75458_i0forward_frame_2 - 0.021 13.9 0.1 0.021 13.9 0.1 1.0 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein Arm_3 PF16186.5 NODE_83395_length_191_cov_1.019231_g75454_i0forward_frame_3 - 0.13 11.8 0.3 0.17 11.5 0.3 1.2 1 0 0 1 1 1 0 Atypical Arm repeat RAMP PF04901.13 NODE_83395_length_191_cov_1.019231_g75454_i0forward_frame_2 - 0.049 13.6 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Receptor activity modifying family DUF3923 PF13061.6 NODE_83389_length_191_cov_1.025641_g75448_i0reverse_frame_2 - 0.11 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3923) YHS PF04945.13 NODE_83389_length_191_cov_1.025641_g75448_i0forward_frame_2 - 0.029 14.5 0.0 0.037 14.1 0.0 1.2 1 0 0 1 1 1 0 YHS domain Syja_N PF02383.18 NODE_83387_length_191_cov_1.025641_g75446_i0reverse_frame_2 - 2.1e-07 30.6 0.2 2.4e-07 30.4 0.2 1.0 1 0 0 1 1 1 1 SacI homology domain IBB PF01749.20 NODE_83383_length_191_cov_1.025641_g75442_i0reverse_frame_2 - 1.5e-05 25.3 2.0 1.7e-05 25.2 2.0 1.1 1 0 0 1 1 1 1 Importin beta binding domain LD_cluster2 PF18163.1 NODE_83381_length_191_cov_1.025641_g75440_i0reverse_frame_3 - 0.02 14.4 0.1 0.023 14.2 0.1 1.1 1 0 0 1 1 1 0 SLOG cluster2 ADD_DNMT3 PF17980.1 NODE_83375_length_191_cov_1.025641_g75434_i0reverse_frame_2 - 0.043 13.8 0.3 0.064 13.2 0.3 1.3 1 0 0 1 1 1 0 Cysteine rich ADD domain in DNMT3 HAUS2 PF15003.6 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_2 - 0.14 11.9 0.0 0.16 11.7 0.0 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 2 Ank_4 PF13637.6 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 1.8e-05 25.2 0.0 2.3e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 8.5e-05 22.8 0.0 0.00011 22.4 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 0.00017 22.1 0.0 0.00017 22.1 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 0.002 18.5 0.0 0.0036 17.7 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeat Ank PF00023.30 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 0.01 16.2 0.0 0.014 15.8 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeat VWA_N2 PF16164.5 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_2 - 0.014 15.6 0.5 0.016 15.4 0.5 1.2 1 0 0 1 1 1 0 VWA N-terminal DTW PF03942.15 NODE_83369_length_191_cov_1.025641_g75428_i0forward_frame_3 - 0.017 14.9 0.0 0.018 14.7 0.0 1.1 1 0 0 1 1 1 0 DTW domain AAA_28 PF13521.6 NODE_83369_length_191_cov_1.025641_g75428_i0forward_frame_3 - 0.029 14.6 0.0 0.03 14.6 0.0 1.0 1 0 0 1 1 1 0 AAA domain LRR_1 PF00560.33 NODE_83363_length_191_cov_1.025641_g75422_i0forward_frame_2 - 0.096 13.3 1.1 0.15 12.7 1.1 1.7 1 1 0 1 1 1 0 Leucine Rich Repeat Tube PF17212.3 NODE_83361_length_191_cov_1.025641_g75420_i0reverse_frame_3 - 0.14 12.2 0.0 0.17 12.0 0.0 1.0 1 0 0 1 1 1 0 Tail tubular protein SepSecS PF05889.13 NODE_83355_length_191_cov_1.025641_g75414_i0reverse_frame_3 - 0.038 12.7 0.0 0.04 12.6 0.0 1.0 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS SMC_N PF02463.19 NODE_83353_length_191_cov_1.025641_g75412_i0reverse_frame_2 - 4.4e-06 26.3 0.0 4.4e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 NODE_83353_length_191_cov_1.025641_g75412_i0reverse_frame_2 - 0.0047 17.1 0.0 0.006 16.8 0.0 1.1 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AA_permease PF00324.21 NODE_83349_length_191_cov_1.025641_g75408_i0reverse_frame_2 - 0.0085 14.7 0.1 0.0085 14.7 0.1 1.0 1 0 0 1 1 1 1 Amino acid permease DUF4984 PF16372.5 NODE_83348_length_191_cov_1.025641_g75407_i0reverse_frame_2 - 0.066 13.1 0.1 0.069 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4984) TMEM154 PF15102.6 NODE_83346_length_191_cov_1.025641_g75405_i0forward_frame_3 - 0.29 11.0 6.3 0.33 10.8 6.3 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF5131 PF07505.11 NODE_83337_length_191_cov_1.025641_g75396_i0forward_frame_3 - 0.054 12.9 0.0 0.055 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF5131) YukD PF08817.10 NODE_83337_length_191_cov_1.025641_g75396_i0forward_frame_2 - 0.12 13.1 0.2 0.16 12.7 0.2 1.3 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD DUF2670 PF10875.8 NODE_83332_length_191_cov_1.064103_g75391_i0forward_frame_2 - 0.015 15.4 0.4 0.017 15.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) TetR_C_30 PF17939.1 NODE_83331_length_191_cov_1.076923_g75390_i0reverse_frame_3 - 0.085 13.1 0.0 0.09 13.0 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain BRI3BP PF14965.6 NODE_83330_length_191_cov_1.083333_g75389_i0reverse_frame_3 - 0.17 11.4 0.2 0.21 11.1 0.2 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 DUF2890 PF11081.8 NODE_83330_length_191_cov_1.083333_g75389_i0forward_frame_3 - 0.042 14.0 0.0 0.046 13.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) Sushi_2 PF09014.10 NODE_83329_length_191_cov_1.083333_g75388_i0reverse_frame_2 - 0.02 14.8 1.2 3.5 7.6 0.1 2.1 1 1 1 2 2 2 0 Beta-2-glycoprotein-1 fifth domain DUF3996 PF13161.6 NODE_83328_length_191_cov_1.089744_g75387_i0forward_frame_3 - 0.0076 16.0 0.0 0.0088 15.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3996) DUF3136 PF11334.8 NODE_83323_length_191_cov_1.108974_g75382_i0forward_frame_3 - 0.012 15.3 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) B-block_TFIIIC PF04182.12 NODE_83313_length_191_cov_1.153846_g75372_i0reverse_frame_3 - 0.037 14.2 0.0 0.048 13.8 0.0 1.1 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC TRAM1 PF08390.11 NODE_83312_length_191_cov_1.166667_g75371_i0forward_frame_2 - 0.64 9.7 4.3 0.23 11.1 1.5 1.6 2 0 0 2 2 2 0 TRAM1-like protein DUF1736 PF08409.11 NODE_83309_length_191_cov_1.173077_g75368_i0forward_frame_3 - 0.43 10.6 5.6 0.23 11.5 1.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1736) Cytomega_TRL10 PF06084.11 NODE_83306_length_191_cov_1.185897_g75365_i0forward_frame_3 - 0.96 9.5 2.7 1.1 9.3 2.7 1.0 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein HMG14_17 PF01101.18 NODE_83304_length_191_cov_1.198718_g75363_i0reverse_frame_3 - 0.012 16.6 3.0 0.013 16.5 3.0 1.1 1 0 0 1 1 1 0 HMG14 and HMG17 Zn_dep_PLPC PF00882.18 NODE_83302_length_191_cov_1.205128_g75361_i0reverse_frame_2 - 0.011 15.8 0.3 0.011 15.7 0.3 1.0 1 0 0 1 1 1 0 Zinc dependent phospholipase C TcdB_toxin_midC PF12255.8 NODE_83301_length_191_cov_1.205128_g75360_i0forward_frame_3 - 0.051 13.7 0.0 0.051 13.6 0.0 1.1 1 0 0 1 1 1 0 Insecticide toxin TcdB middle/C-terminal region DUF2207 PF09972.9 NODE_83294_length_191_cov_1.224359_g75353_i0reverse_frame_3 - 3.9 6.1 3.7 4.1 6.1 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) NEMP PF10225.9 NODE_83294_length_191_cov_1.224359_g75353_i0forward_frame_3 - 1.1 8.9 1.9 0.98 9.0 1.9 1.0 1 0 0 1 1 1 0 NEMP family FpoO PF10621.9 NODE_83293_length_191_cov_1.224359_g75352_i0forward_frame_2 - 0.0013 19.0 0.2 0.0014 18.9 0.2 1.1 1 0 0 1 1 1 1 F420H2 dehydrogenase subunit FpoO YbgS PF13985.6 NODE_83293_length_191_cov_1.224359_g75352_i0forward_frame_2 - 0.098 12.9 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 YbgS-like protein B3R PF17057.5 NODE_83290_length_191_cov_1.237179_g75349_i0reverse_frame_3 - 0.065 13.4 0.1 0.069 13.4 0.1 1.1 1 0 0 1 1 1 0 Poxviridae B3 protein FANCI_HD1 PF14679.6 NODE_83289_length_191_cov_1.237179_g75348_i0reverse_frame_3 - 0.071 13.1 2.7 0.082 12.9 2.7 1.1 1 0 0 1 1 1 0 FANCI helical domain 1 FBPase_glpX PF03320.13 NODE_83289_length_191_cov_1.237179_g75348_i0reverse_frame_2 - 1.5e-26 93.0 1.2 1.6e-26 92.9 1.2 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MCM_N PF14551.6 NODE_83287_length_191_cov_1.243590_g75346_i0reverse_frame_2 - 1e-06 29.2 0.3 1e-06 29.2 0.3 1.0 1 0 0 1 1 1 1 MCM N-terminal domain RACo_C_ter PF14574.6 NODE_83284_length_191_cov_1.256410_g75343_i0forward_frame_2 - 0.066 12.3 0.0 0.066 12.3 0.0 1.0 1 0 0 1 1 1 0 C-terminal domain of RACo the ASKHA domain HERV-K_REC PF15695.5 NODE_83282_length_191_cov_1.269231_g75341_i0reverse_frame_2 - 0.17 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Rec (regulator of expression encoded by corf) of HERV-K-113 Peptidase_C54 PF03416.19 NODE_83279_length_191_cov_1.275641_g75338_i0reverse_frame_3 - 0.012 15.1 0.0 0.012 15.1 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C54 PIG-F PF06699.11 NODE_83279_length_191_cov_1.275641_g75338_i0forward_frame_2 - 0.0039 17.4 0.0 0.0042 17.3 0.0 1.0 1 0 0 1 1 1 1 GPI biosynthesis protein family Pig-F DUF782 PF05614.11 NODE_83274_length_191_cov_1.275641_g75333_i0reverse_frame_3 - 0.024 15.0 0.0 0.029 14.7 0.0 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks397.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks397.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks397.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks397.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:32:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Microvir_lysis PF04517.12 NODE_83269_length_191_cov_1.282051_g75328_i0reverse_frame_2 - 0.11 12.5 1.2 0.11 12.5 0.1 1.6 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus DUF2066 PF09839.9 NODE_83269_length_191_cov_1.282051_g75328_i0forward_frame_2 - 0.078 12.4 0.2 0.079 12.4 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2066) Bundlin PF05307.11 NODE_83266_length_191_cov_1.282051_g75325_i0forward_frame_3 - 0.044 13.6 0.1 0.072 12.9 0.1 1.4 1 0 0 1 1 1 0 Bundlin NADH-u_ox-rdase PF10785.9 NODE_83265_length_191_cov_1.282051_g75324_i0reverse_frame_3 - 0.12 13.1 0.0 0.13 12.9 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit His_Phos_2 PF00328.22 NODE_83257_length_191_cov_1.314103_g75316_i0forward_frame_2 - 0.029 13.7 0.0 0.031 13.6 0.0 1.0 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) Flagellin_N PF00669.20 NODE_83246_length_191_cov_1.352564_g75305_i0reverse_frame_2 - 0.051 13.7 0.1 0.054 13.6 0.1 1.1 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region HECT PF00632.25 NODE_83242_length_191_cov_1.371795_g75301_i0forward_frame_3 - 1.6e-13 50.9 0.1 1.7e-13 50.8 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) HTH_Bact PF18768.1 NODE_83242_length_191_cov_1.371795_g75301_i0forward_frame_2 - 0.014 14.9 0.1 0.017 14.7 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix bacterial domain PHBC_N PF12551.8 NODE_83240_length_191_cov_1.391026_g75299_i0forward_frame_2 - 0.037 13.8 3.3 0.075 12.8 0.3 2.2 2 0 0 2 2 2 0 Poly-beta-hydroxybutyrate polymerase N terminal CytoC_RC PF02276.18 NODE_83239_length_191_cov_1.403846_g75298_i0forward_frame_3 - 0.093 12.1 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Photosynthetic reaction centre cytochrome C subunit Cnn_1N PF07989.11 NODE_83234_length_191_cov_1.416667_g75293_i0forward_frame_2 - 0.002 18.2 2.3 0.0022 18.1 2.3 1.1 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 BRE1 PF08647.11 NODE_83234_length_191_cov_1.416667_g75293_i0forward_frame_2 - 0.011 15.8 2.8 0.012 15.6 2.8 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase HALZ PF02183.18 NODE_83234_length_191_cov_1.416667_g75293_i0forward_frame_2 - 0.034 14.4 6.3 3.8 7.8 0.1 3.0 2 1 1 3 3 3 0 Homeobox associated leucine zipper UFD1 PF03152.14 NODE_83234_length_191_cov_1.416667_g75293_i0forward_frame_2 - 0.046 13.2 0.3 0.053 13.0 0.3 1.3 1 1 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 DUF1453 PF07301.11 NODE_83224_length_191_cov_1.480769_g75283_i0forward_frame_3 - 0.021 14.8 0.1 0.024 14.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1453) MEIOC PF15189.6 NODE_83223_length_191_cov_1.487179_g75282_i0forward_frame_2 - 0.025 14.2 0.0 0.026 14.1 0.0 1.0 1 0 0 1 1 1 0 Meiosis-specific coiled-coil domain-containing protein MEIOC Psb28 PF03912.14 NODE_83217_length_191_cov_1.500000_g75276_i0forward_frame_2 - 0.11 12.8 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Psb28 protein MORN PF02493.20 NODE_83215_length_191_cov_1.500000_g75274_i0reverse_frame_2 - 2e-05 24.2 2.0 0.00012 21.7 0.7 2.5 3 0 0 3 3 3 1 MORN repeat Endonuc-EcoRV PF09233.11 NODE_83215_length_191_cov_1.500000_g75274_i0reverse_frame_2 - 0.049 13.0 0.1 0.053 12.9 0.1 1.0 1 0 0 1 1 1 0 Restriction endonuclease EcoRV P5-ATPase PF12409.8 NODE_83211_length_191_cov_1.506410_g75270_i0forward_frame_2 - 0.3 11.2 3.4 0.34 11.0 3.4 1.1 1 0 0 1 1 1 0 P5-type ATPase cation transporter DUF4131 PF13567.6 NODE_83211_length_191_cov_1.506410_g75270_i0forward_frame_2 - 3.4 7.3 6.1 4.3 7.0 6.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) EAL PF00563.20 NODE_83202_length_191_cov_1.525641_g75261_i0reverse_frame_3 - 8.6e-15 54.9 0.0 9.1e-15 54.8 0.0 1.0 1 0 0 1 1 1 1 EAL domain Kelch_6 PF13964.6 NODE_83198_length_191_cov_1.532051_g75257_i0reverse_frame_3 - 0.14 12.5 1.3 0.21 11.9 1.3 1.2 1 0 0 1 1 1 0 Kelch motif SR-25 PF10500.9 NODE_83198_length_191_cov_1.532051_g75257_i0forward_frame_2 - 1 8.9 6.7 1.1 8.8 6.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Bap31_Bap29_C PF18035.1 NODE_83191_length_191_cov_1.538462_g75250_i0forward_frame_2 - 0.14 12.2 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain RdRP_2 PF00978.21 NODE_83190_length_191_cov_1.538462_g75249_i0reverse_frame_2 - 0.00012 21.1 0.2 0.00015 20.8 0.2 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase RAI16-like PF10257.9 NODE_83179_length_191_cov_1.538462_g75238_i0reverse_frame_2 - 0.052 12.4 0.5 0.055 12.3 0.5 1.0 1 0 0 1 1 1 0 Retinoic acid induced 16-like protein zf-ANAPC11 PF12861.7 NODE_83179_length_191_cov_1.538462_g75238_i0reverse_frame_2 - 0.12 12.4 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Neur_chan_memb PF02932.16 NODE_83176_length_191_cov_1.538462_g75235_i0forward_frame_3 - 0.046 13.8 0.1 0.046 13.8 0.1 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CBFB_NFYA PF02045.15 NODE_83175_length_191_cov_1.544872_g75234_i0reverse_frame_3 - 0.75 10.5 6.0 0.99 10.1 5.7 1.5 1 1 0 1 1 1 0 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B UBA_e1_thiolCys PF10585.9 NODE_83173_length_191_cov_1.557692_g75232_i0forward_frame_2 - 0.026 14.5 0.2 0.026 14.5 0.2 1.1 1 0 0 1 1 1 0 Ubiquitin-activating enzyme active site Glycos_transf_2 PF00535.26 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 8.9e-14 51.7 0.1 1e-13 51.5 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 2.1e-07 31.1 0.0 2.3e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 0.0001 21.9 0.1 0.00011 21.7 0.1 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Par3_HAL_N_term PF12053.8 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 0.094 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 N-terminal of Par3 and HAL proteins PqqD PF05402.12 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) mRNA_decap_C PF16741.5 NODE_83171_length_191_cov_1.583333_g75230_i0forward_frame_2 - 0.13 11.6 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 mRNA-decapping enzyme C-terminus HAP2-GCS1 PF10699.9 NODE_83165_length_191_cov_1.615385_g75224_i0reverse_frame_3 - 0.063 13.3 0.0 0.077 13.0 0.0 1.2 1 0 0 1 1 1 0 Male gamete fusion factor DUF1196 PF06709.11 NODE_83165_length_191_cov_1.615385_g75224_i0forward_frame_2 - 0.075 13.2 0.1 0.15 12.2 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1196) KTI12 PF08433.10 NODE_83157_length_191_cov_1.666667_g75216_i0reverse_frame_2 - 0.075 12.5 0.1 0.075 12.5 0.1 1.0 1 0 0 1 1 1 0 Chromatin associated protein KTI12 PALP PF00291.25 NODE_83155_length_191_cov_1.679487_g75214_i0reverse_frame_3 - 1.4e-09 37.8 0.1 1.6e-09 37.6 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF4949 PF16307.5 NODE_83155_length_191_cov_1.679487_g75214_i0reverse_frame_3 - 0.069 13.3 0.1 0.076 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4949) Csm1_B PF18211.1 NODE_83155_length_191_cov_1.679487_g75214_i0reverse_frame_3 - 0.13 12.2 0.2 1.3 8.9 0.0 1.9 1 1 1 2 2 2 0 Csm1 subunit domain B Lamprin PF06403.11 NODE_83154_length_191_cov_1.692308_g75213_i0forward_frame_3 - 0.91 9.5 5.4 2 8.4 5.4 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_83154_length_191_cov_1.692308_g75213_i0forward_frame_2 - 0.14 12.1 4.2 0.17 11.9 4.2 1.2 1 0 0 1 1 1 0 Lamprin YqgC PF17430.2 NODE_83149_length_191_cov_1.717949_g75208_i0reverse_frame_2 - 0.6 10.2 3.4 0.96 9.6 3.4 1.3 1 0 0 1 1 1 0 Uncharacterized YqgC-like RVT_1 PF00078.27 NODE_83143_length_191_cov_1.737179_g75202_i0reverse_frame_3 - 5.1e-05 22.9 0.1 5.1e-05 22.9 0.1 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) MEIOC PF15189.6 NODE_83140_length_191_cov_1.743590_g75199_i0reverse_frame_2 - 0.025 14.2 0.0 0.026 14.1 0.0 1.0 1 0 0 1 1 1 0 Meiosis-specific coiled-coil domain-containing protein MEIOC zf-primase PF09329.11 NODE_83139_length_191_cov_1.750000_g75198_i0reverse_frame_3 - 0.017 14.9 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Primase zinc finger TilS PF09179.11 NODE_83133_length_191_cov_1.775641_g75192_i0reverse_frame_2 - 0.21 12.1 7.8 0.26 11.8 7.8 1.3 1 1 0 1 1 1 0 TilS substrate binding domain PhoLip_ATPase_N PF16209.5 NODE_83131_length_191_cov_1.782051_g75190_i0reverse_frame_3 - 0.013 15.2 0.2 0.016 14.9 0.2 1.2 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal Chordopox_L2 PF05803.12 NODE_83131_length_191_cov_1.782051_g75190_i0reverse_frame_3 - 0.051 13.4 0.2 0.057 13.3 0.2 1.1 1 0 0 1 1 1 0 Chordopoxvirus L2 protein DUF2417 PF10329.9 NODE_83127_length_191_cov_1.788462_g75186_i0forward_frame_3 - 2.4 7.5 6.5 2.7 7.3 6.5 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Transposase_28 PF04195.12 NODE_83126_length_191_cov_1.788462_g75185_i0reverse_frame_2 - 0.0064 16.7 1.2 0.007 16.6 1.2 1.2 1 0 0 1 1 1 1 Putative gypsy type transposon Arm-DNA-bind_3 PF13356.6 NODE_83122_length_191_cov_1.852564_g75181_i0forward_frame_2 - 0.2 12.0 3.2 0.32 11.4 3.2 1.5 1 1 0 1 1 1 0 Arm DNA-binding domain Paf1 PF03985.13 NODE_83121_length_191_cov_1.871795_g75180_i0forward_frame_2 - 0.24 10.4 0.0 0.24 10.4 0.0 1.0 1 0 0 1 1 1 0 Paf1 Pur_ac_phosph_N PF16656.5 NODE_83117_length_191_cov_1.929487_g75176_i0reverse_frame_3 - 0.037 14.6 0.0 0.037 14.6 0.0 1.1 1 0 0 1 1 1 0 Purple acid Phosphatase, N-terminal domain Hep_core_N PF08290.11 NODE_83117_length_191_cov_1.929487_g75176_i0forward_frame_2 - 5 7.2 9.8 0.63 10.1 4.6 2.0 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger PA14 PF07691.12 NODE_83116_length_191_cov_1.935897_g75175_i0forward_frame_3 - 0.12 12.2 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 PA14 domain Caudo_TAP PF02413.17 NODE_83111_length_191_cov_1.961538_g75170_i0forward_frame_2 - 2.4e-07 30.9 0.0 2.6e-07 30.8 0.0 1.0 1 0 0 1 1 1 1 Caudovirales tail fibre assembly protein, lambda gpK UcrQ PF02939.16 NODE_83101_length_191_cov_2.012821_g75160_i0forward_frame_3 - 0.068 13.1 0.1 0.076 13.0 0.1 1.2 1 0 0 1 1 1 0 UcrQ family CDP-OH_P_transf PF01066.21 NODE_83091_length_191_cov_2.038462_g75150_i0forward_frame_2 - 0.14 13.0 0.9 0.17 12.7 0.9 1.1 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase PPR_2 PF13041.6 NODE_83087_length_191_cov_2.051282_g75146_i0reverse_frame_3 - 0.0019 18.3 0.0 0.0078 16.4 0.0 1.8 2 0 0 2 2 2 1 PPR repeat family PPR_3 PF13812.6 NODE_83087_length_191_cov_2.051282_g75146_i0reverse_frame_3 - 0.076 13.1 0.0 0.2 11.7 0.0 1.7 1 1 1 2 2 2 0 Pentatricopeptide repeat domain Phospholamban PF04272.14 NODE_83086_length_191_cov_2.051282_g75145_i0reverse_frame_2 - 0.33 10.4 4.4 0.47 10.0 4.4 1.2 1 0 0 1 1 1 0 Phospholamban WD40 PF00400.32 NODE_83086_length_191_cov_2.051282_g75145_i0forward_frame_3 - 0.0021 18.9 0.3 0.0079 17.0 0.2 1.8 2 0 0 2 2 2 1 WD domain, G-beta repeat Nup160 PF11715.8 NODE_83086_length_191_cov_2.051282_g75145_i0forward_frame_3 - 0.035 12.7 0.0 0.036 12.7 0.0 1.0 1 0 0 1 1 1 0 Nucleoporin Nup120/160 DUF1347 PF07079.11 NODE_83084_length_191_cov_2.051282_g75143_i0reverse_frame_2 - 0.00052 18.7 0.2 0.00058 18.6 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1347) DUF1816 PF08846.10 NODE_83077_length_191_cov_2.096154_g75136_i0reverse_frame_2 - 0.089 12.8 3.9 0.48 10.5 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1816) Toxin_22 PF08092.11 NODE_83076_length_191_cov_2.096154_g75135_i0reverse_frame_2 - 0.12 12.4 0.1 0.19 11.8 0.1 1.2 1 0 0 1 1 1 0 Magi peptide toxin family Radical_SAM PF04055.21 NODE_83072_length_191_cov_2.115385_g75131_i0reverse_frame_2 - 0.0091 16.4 0.0 0.0091 16.4 0.0 1.1 1 0 0 1 1 1 1 Radical SAM superfamily SLAM PF06214.11 NODE_83071_length_191_cov_2.134615_g75130_i0forward_frame_2 - 0.091 12.8 1.0 0.1 12.6 1.0 1.2 1 0 0 1 1 1 0 Signaling lymphocytic activation molecule (SLAM) protein DUF4049 PF13258.6 NODE_83067_length_191_cov_2.173077_g75126_i0reverse_frame_2 - 2.3e-19 69.7 1.9 2.4e-19 69.6 1.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4049) WSK PF03832.13 NODE_83066_length_191_cov_2.198718_g75125_i0forward_frame_3 - 0.19 11.5 1.0 0.38 10.5 0.2 1.8 2 0 0 2 2 2 0 WSK motif WW PF00397.26 NODE_83065_length_191_cov_2.217949_g75124_i0forward_frame_2 - 2.5e-06 27.4 0.2 3.8e-06 26.9 0.2 1.3 1 0 0 1 1 1 1 WW domain Cytomega_gL PF01801.16 NODE_83062_length_191_cov_2.237179_g75121_i0reverse_frame_3 - 0.065 12.6 0.0 0.069 12.5 0.0 1.0 1 0 0 1 1 1 0 Cytomegalovirus glycoprotein L DASH_Dad1 PF08649.10 NODE_83052_length_191_cov_2.320513_g75111_i0reverse_frame_2 - 0.027 14.7 2.2 0.1 12.8 0.3 2.0 1 1 1 2 2 2 0 DASH complex subunit Dad1 Cpn60_TCP1 PF00118.24 NODE_83051_length_191_cov_2.339744_g75110_i0reverse_frame_3 - 0.00016 20.5 0.0 0.00017 20.4 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family UvrB_inter PF17757.1 NODE_83051_length_191_cov_2.339744_g75110_i0reverse_frame_3 - 0.01 16.0 0.0 0.011 15.9 0.0 1.1 1 0 0 1 1 1 1 UvrB interaction domain KH_5 PF13184.6 NODE_83051_length_191_cov_2.339744_g75110_i0reverse_frame_3 - 0.011 15.8 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 0 NusA-like KH domain HEPN_AbiA_CTD PF18732.1 NODE_83048_length_191_cov_2.371795_g75107_i0reverse_frame_2 - 0.23 11.4 4.5 0.26 11.2 4.5 1.1 1 0 0 1 1 1 0 HEPN like, Abia C-terminal domain Ribos_L4_asso_C PF14374.6 NODE_83048_length_191_cov_2.371795_g75107_i0forward_frame_2 - 0.053 13.6 0.5 0.063 13.3 0.5 1.1 1 0 0 1 1 1 0 60S ribosomal protein L4 C-terminal domain DUF2946 PF11162.8 NODE_83047_length_191_cov_2.397436_g75106_i0reverse_frame_3 - 0.17 12.6 4.1 0.19 12.4 4.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) HNOBA PF07701.14 NODE_83045_length_191_cov_2.448718_g75104_i0forward_frame_2 - 0.2 11.1 0.3 0.22 10.9 0.3 1.1 1 0 0 1 1 1 0 Heme NO binding associated HAP1_N PF04849.13 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.00052 19.3 3.7 0.00057 19.2 3.7 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region Enkurin PF13864.6 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.037 14.5 4.0 0.048 14.1 4.0 1.1 1 0 0 1 1 1 0 Calmodulin-binding Seryl_tRNA_N PF02403.22 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.045 14.0 4.6 0.053 13.7 4.6 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain LPP PF04728.13 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.08 13.4 1.3 0.89 10.0 0.7 2.0 1 1 1 2 2 2 0 Lipoprotein leucine-zipper DivIC PF04977.15 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.19 11.5 3.6 0.24 11.2 3.6 1.3 1 0 0 1 1 1 0 Septum formation initiator FlaC_arch PF05377.11 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.33 11.4 5.9 4.1 7.9 5.9 2.1 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) bZIP_2 PF07716.15 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 1.1 9.4 5.3 1.7 8.8 2.2 2.0 1 1 1 2 2 2 0 Basic region leucine zipper ANAPC1 PF12859.7 NODE_83039_length_191_cov_2.551282_g75098_i0reverse_frame_3 - 9.1 6.8 12.8 9.8 6.7 12.8 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 zinc_ribbon_2 PF13240.6 NODE_83038_length_191_cov_2.557692_g75097_i0forward_frame_2 - 0.11 12.3 7.4 1.4 8.8 0.7 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 NODE_83038_length_191_cov_2.557692_g75097_i0forward_frame_2 - 0.18 11.3 2.9 3.4 7.2 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain T3SSipB PF16535.5 NODE_83037_length_191_cov_2.557692_g75096_i0forward_frame_3 - 0.088 13.3 0.0 0.09 13.3 0.0 1.1 1 0 0 1 1 1 0 Type III cell invasion protein SipB Fer4 PF00037.27 NODE_83030_length_191_cov_2.698718_g75089_i0forward_frame_3 - 2.3 8.2 5.6 0.52 10.2 2.5 1.5 2 0 0 2 2 2 0 4Fe-4S binding domain HTH_IclR PF09339.10 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 2.1e-09 37.1 1.0 2.5e-09 36.8 1.0 1.1 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_28 PF13518.6 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 0.018 15.2 0.0 0.026 14.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 0.037 13.6 0.0 0.046 13.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 0.084 12.8 0.0 0.1 12.6 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain GYR PF02756.14 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 0.42 10.4 2.8 2.9 7.7 0.0 2.2 2 0 0 2 2 2 0 GYR motif KIAA1430 PF13879.6 NODE_83028_length_191_cov_2.737179_g75087_i0reverse_frame_2 - 1.5e-05 25.7 0.1 1.7e-05 25.5 0.1 1.1 1 0 0 1 1 1 1 KIAA1430 homologue LRRNT PF01462.18 NODE_83026_length_191_cov_2.807692_g75085_i0reverse_frame_3 - 0.21 11.3 0.4 0.27 10.9 0.4 1.2 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain Lamprin PF06403.11 NODE_83021_length_191_cov_2.891026_g75080_i0forward_frame_2 - 0.015 15.3 0.7 0.017 15.1 0.7 1.1 1 0 0 1 1 1 0 Lamprin Transthyretin PF00576.21 NODE_83019_length_191_cov_2.923077_g75078_i0reverse_frame_2 - 2e-19 70.3 1.1 2.3e-19 70.1 1.1 1.0 1 0 0 1 1 1 1 HIUase/Transthyretin family NiFe-hyd_HybE PF11939.8 NODE_83016_length_191_cov_3.025641_g75075_i0forward_frame_3 - 3.4e-12 46.5 0.0 3.5e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 [NiFe]-hydrogenase assembly, chaperone, HybE PIR PF00399.19 NODE_83015_length_191_cov_3.032051_g75074_i0forward_frame_3 - 0.43 10.2 4.3 0.97 9.1 4.3 1.6 1 0 0 1 1 1 0 Yeast PIR protein repeat DUF3989 PF13150.6 NODE_83013_length_191_cov_3.051282_g75072_i0reverse_frame_3 - 0.14 11.9 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) LAL_C2 PF18603.1 NODE_83012_length_191_cov_3.179487_g75071_i0forward_frame_3 - 0.027 14.6 0.1 0.037 14.2 0.1 1.2 1 0 0 1 1 1 0 L-amino acid ligase C-terminal domain 2 DUF3377 PF11857.8 NODE_83006_length_191_cov_3.621795_g75065_i0forward_frame_2 - 0.083 12.8 0.6 0.1 12.5 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) DUF3481 PF11980.8 NODE_82999_length_191_cov_6.025641_g75058_i0forward_frame_3 - 0.13 11.9 0.6 0.14 11.9 0.6 1.1 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein NBD94 PF16830.5 NODE_82996_length_191_cov_10.487179_g75055_i0reverse_frame_2 - 0.014 15.8 0.3 0.017 15.5 0.3 1.1 1 0 0 1 1 1 0 Nucleotide-Binding Domain 94 of RH SR-25 PF10500.9 NODE_82990_length_191_cov_18.250000_g75049_i0forward_frame_2 - 0.05 13.2 16.8 0.055 13.1 16.8 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF5090 PF17009.5 NODE_82979_length_191_cov_29.987179_g75038_i0reverse_frame_3 - 8.3 6.3 17.0 9.4 6.2 17.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DNAPolymera_Pol PF11590.8 NODE_82974_length_191_cov_34.474359_g75033_i0reverse_frame_3 - 0.087 12.7 0.3 0.16 11.9 0.3 1.4 1 0 0 1 1 1 0 DNA polymerase catalytic subunit Pol DUF480 PF04337.12 NODE_82973_length_191_cov_37.788462_g75032_i0forward_frame_2 - 0.036 14.2 0.0 0.041 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF480 WBP-1 PF11669.8 NODE_82971_length_191_cov_39.557692_g75030_i0forward_frame_2 - 0.084 13.5 0.1 0.098 13.3 0.1 1.0 1 0 0 1 1 1 0 WW domain-binding protein 1 Guanylin PF02058.15 NODE_82970_length_191_cov_39.602564_g75029_i0reverse_frame_2 - 0.1 13.1 0.2 0.11 13.0 0.2 1.2 1 0 0 1 1 1 0 Guanylin precursor DUF2630 PF10944.8 NODE_82966_length_191_cov_45.794872_g75025_i0reverse_frame_2 - 0.092 13.2 0.0 0.1 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) PGA2 PF07543.12 NODE_82964_length_191_cov_48.256410_g75023_i0reverse_frame_2 - 1.2 9.1 16.1 1.4 8.9 16.1 1.1 1 0 0 1 1 1 0 Protein trafficking PGA2 PBP1_TM PF14812.6 NODE_82964_length_191_cov_48.256410_g75023_i0reverse_frame_2 - 2.6 8.5 18.8 3.1 8.2 18.8 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Pox_Ag35 PF03286.14 NODE_82964_length_191_cov_48.256410_g75023_i0reverse_frame_2 - 7.6 6.3 21.2 8.6 6.1 21.2 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF3381 PF11861.8 NODE_82964_length_191_cov_48.256410_g75023_i0reverse_frame_2 - 7.9 6.3 23.3 8.5 6.2 23.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) VIT1 PF01988.19 NODE_82964_length_191_cov_48.256410_g75023_i0forward_frame_2 - 0.36 10.7 10.1 0.34 10.7 10.1 1.0 1 0 0 1 1 1 0 VIT family XFP_N PF09364.10 NODE_82951_length_191_cov_65.679487_g75010_i0reverse_frame_2 - 0.092 11.5 0.0 0.093 11.5 0.0 1.0 1 0 0 1 1 1 0 XFP N-terminal domain P53 PF00870.18 NODE_82949_length_191_cov_70.717949_g75008_i0forward_frame_3 - 0.032 14.0 0.0 0.035 13.9 0.0 1.0 1 0 0 1 1 1 0 P53 DNA-binding domain Internalin_N PF12354.8 NODE_82946_length_191_cov_72.846154_g75005_i0forward_frame_3 - 4.5 7.4 5.4 5.2 7.2 2.5 2.3 1 1 1 2 2 2 0 Bacterial adhesion/invasion protein N terminal Ig_3 PF13927.6 NODE_82941_length_191_cov_79.032051_g75000_i0reverse_frame_2 - 0.062 13.9 0.3 0.065 13.8 0.3 1.2 1 0 0 1 1 1 0 Immunoglobulin domain MID_pPIWI_RE PF18157.1 NODE_82939_length_191_cov_87.801282_g74998_i0reverse_frame_3 - 0.1 12.9 0.1 0.11 12.8 0.1 1.1 1 0 0 1 1 1 0 MID domain of pPIWI_RE DUF4312 PF14189.6 NODE_82937_length_191_cov_88.891026_g74996_i0reverse_frame_2 - 0.17 11.9 0.3 0.24 11.4 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) GATase PF00117.28 NODE_82930_length_191_cov_117.743590_g74989_i0reverse_frame_2 - 0.11 12.2 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferase class-I zf-C2H2_11 PF16622.5 NODE_82928_length_191_cov_125.615385_g74987_i0reverse_frame_2 - 0.016 15.0 0.3 0.026 14.3 0.3 1.3 1 0 0 1 1 1 0 zinc-finger C2H2-type Methyltrans_Mon PF14314.6 NODE_82928_length_191_cov_125.615385_g74987_i0forward_frame_3 - 0.2 9.7 0.0 0.21 9.5 0.0 1.0 1 0 0 1 1 1 0 Virus-capping methyltransferase Zfx_Zfy_act PF04704.13 NODE_82927_length_191_cov_126.519231_g74986_i0reverse_frame_3 - 0.15 11.2 0.2 0.14 11.2 0.2 1.0 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region zf-U1 PF06220.12 NODE_82927_length_191_cov_126.519231_g74986_i0reverse_frame_3 - 0.18 11.6 0.3 0.18 11.6 0.3 1.8 2 0 0 2 2 2 0 U1 zinc finger zf-CCCH_3 PF15663.5 NODE_82927_length_191_cov_126.519231_g74986_i0forward_frame_2 - 0.24 11.6 3.7 0.28 11.4 3.7 1.1 1 0 0 1 1 1 0 Zinc-finger containing family DcpS_C PF11969.8 NODE_82918_length_191_cov_168.384615_g74977_i0forward_frame_2 - 0.016 15.6 0.1 0.016 15.6 0.1 1.1 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme C-term binding SH3_11 PF18103.1 NODE_82916_length_191_cov_179.128205_g74975_i0forward_frame_3 - 0.62 10.3 4.7 0.36 11.0 2.6 1.6 1 1 1 2 2 2 0 Retroviral integrase C-terminal SH3 domain V1R PF03402.14 NODE_82914_length_191_cov_288.794872_g74973_i0forward_frame_2 - 0.037 13.7 1.1 0.039 13.6 1.1 1.0 1 0 0 1 1 1 0 Vomeronasal organ pheromone receptor family, V1R HRG PF16954.5 NODE_82911_length_191_cov_1313.448718_g74970_i0reverse_frame_2 - 0.002 18.5 0.2 0.002 18.5 0.2 1.2 1 0 0 1 1 1 1 Haem-transporter, endosomal/lysosomal, haem-responsive gene DHFR_2 PF06442.11 NODE_82902_length_192_cov_0.847134_g74961_i0reverse_frame_3 - 0.13 12.1 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 R67 dihydrofolate reductase E1_dh PF00676.20 NODE_82901_length_192_cov_0.898089_g74960_i0reverse_frame_2 - 5.5e-09 35.4 0.1 5.5e-09 35.4 0.1 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component CD99L2 PF12301.8 NODE_82900_length_192_cov_0.904459_g74959_i0reverse_frame_2 - 0.75 10.1 4.9 0.9 9.8 4.9 1.1 1 0 0 1 1 1 0 CD99 antigen like protein 2 Colipase PF01114.18 NODE_82900_length_192_cov_0.904459_g74959_i0forward_frame_3 - 0.054 13.2 0.3 0.086 12.5 0.3 1.4 1 0 0 1 1 1 0 Colipase, N-terminal domain SPC25 PF06703.11 NODE_82898_length_192_cov_0.929936_g74957_i0forward_frame_3 - 1.2 8.9 4.8 1.3 8.8 4.8 1.0 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Holin_SPP1 PF04688.13 NODE_82897_length_192_cov_0.936306_g74956_i0forward_frame_3 - 0.08 13.1 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 SPP1 phage holin Chi-conotoxin PF16981.5 NODE_82893_length_192_cov_0.968153_g74952_i0forward_frame_2 - 0.063 13.5 0.1 0.12 12.7 0.1 1.4 1 0 0 1 1 1 0 chi-Conotoxin or t superfamily Rubella_Capsid PF05750.11 NODE_82890_length_192_cov_1.006369_g74949_i0reverse_frame_3 - 0.48 10.0 4.0 0.5 9.9 4.0 1.0 1 0 0 1 1 1 0 Rubella capsid protein Bombinin PF05298.11 NODE_82890_length_192_cov_1.006369_g74949_i0reverse_frame_2 - 0.12 12.1 0.2 0.12 12.0 0.2 1.1 1 0 0 1 1 1 0 Bombinin Kinesin PF00225.23 NODE_82888_length_192_cov_1.006369_g74947_i0reverse_frame_2 - 4.2e-06 25.9 0.1 4.3e-06 25.9 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_82888_length_192_cov_1.006369_g74947_i0reverse_frame_2 - 0.0012 18.9 0.0 0.0012 18.8 0.0 1.1 1 0 0 1 1 1 1 Microtubule binding Sir1 PF11603.8 NODE_82888_length_192_cov_1.006369_g74947_i0reverse_frame_2 - 0.0065 17.0 0.1 0.0072 16.8 0.1 1.1 1 0 0 1 1 1 1 Regulatory protein Sir1 Pox_T4_C PF04490.12 NODE_82888_length_192_cov_1.006369_g74947_i0forward_frame_3 - 0.16 12.1 0.0 0.19 11.9 0.0 1.0 1 0 0 1 1 1 0 Poxvirus T4 protein, C terminus MSA-2c PF12238.8 NODE_82884_length_192_cov_1.006369_g74943_i0reverse_frame_3 - 1.2 9.1 3.2 1.3 9.0 3.2 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Lamprin PF06403.11 NODE_82884_length_192_cov_1.006369_g74943_i0forward_frame_3 - 0.016 15.1 1.4 0.016 15.1 1.4 1.2 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_82884_length_192_cov_1.006369_g74943_i0forward_frame_2 - 0.027 14.4 4.0 0.028 14.4 3.4 1.3 1 1 0 1 1 1 0 Lamprin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks398.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks398.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks398.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks398.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CHASE PF03924.13 NODE_82879_length_192_cov_1.012739_g74938_i0reverse_frame_3 - 0.077 12.9 0.0 0.087 12.8 0.0 1.0 1 0 0 1 1 1 0 CHASE domain eIF2_C PF09173.11 NODE_82879_length_192_cov_1.012739_g74938_i0reverse_frame_2 - 0.052 13.8 0.0 0.062 13.5 0.0 1.1 1 0 0 1 1 1 0 Initiation factor eIF2 gamma, C terminal ThaI PF15514.6 NODE_82875_length_192_cov_1.012739_g74934_i0reverse_frame_3 - 0.075 12.7 0.0 0.088 12.4 0.0 1.0 1 0 0 1 1 1 0 Restriction endonuclease ThaI ERbeta_N PF12497.8 NODE_82874_length_192_cov_1.012739_g74933_i0forward_frame_2 - 0.065 13.0 0.0 0.082 12.7 0.0 1.3 1 0 0 1 1 1 0 Estrogen receptor beta UPF0239 PF06783.11 NODE_82871_length_192_cov_1.012739_g74930_i0forward_frame_2 - 0.15 12.3 0.1 1.2 9.4 0.0 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0239) SipA_VBS PF17985.1 NODE_82870_length_192_cov_1.012739_g74929_i0reverse_frame_3 - 2.4 8.2 6.5 4.3 7.4 1.3 2.3 2 0 0 2 2 2 0 SipA vinculin binding site YpzI PF14140.6 NODE_82870_length_192_cov_1.012739_g74929_i0forward_frame_2 - 0.031 14.0 0.2 0.062 13.1 0.2 1.5 1 0 0 1 1 1 0 YpzI-like protein DUF1289 PF06945.13 NODE_82861_length_192_cov_1.019108_g74920_i0reverse_frame_3 - 0.0097 15.7 1.2 0.018 14.9 1.2 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1289) DUF1700 PF08006.11 NODE_82861_length_192_cov_1.019108_g74920_i0forward_frame_2 - 6.8 6.2 12.6 7.1 6.1 12.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Exo_endo_phos PF03372.23 NODE_82853_length_192_cov_1.019108_g74912_i0reverse_frame_2 - 0.011 15.3 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_82853_length_192_cov_1.019108_g74912_i0reverse_frame_2 - 0.11 12.4 0.0 0.12 12.2 0.0 1.3 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase zf-ISL3 PF14690.6 NODE_82848_length_192_cov_1.019108_g74907_i0reverse_frame_2 - 0.013 16.2 3.9 0.016 15.9 3.9 1.2 1 0 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Glyco_hydro_64 PF16483.5 NODE_82847_length_192_cov_1.019108_g74906_i0forward_frame_3 - 0.049 12.9 0.0 0.051 12.9 0.0 1.0 1 0 0 1 1 1 0 Beta-1,3-glucanase DUF3439 PF11921.8 NODE_82840_length_192_cov_1.019108_g74899_i0reverse_frame_3 - 0.045 13.7 1.2 0.046 13.7 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) FtsL PF04999.13 NODE_82840_length_192_cov_1.019108_g74899_i0forward_frame_3 - 0.014 15.4 0.1 0.015 15.3 0.1 1.0 1 0 0 1 1 1 0 Cell division protein FtsL EphA2_TM PF14575.6 NODE_82840_length_192_cov_1.019108_g74899_i0forward_frame_3 - 0.16 12.9 0.7 0.19 12.6 0.7 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Agglutinin_C PF18021.1 NODE_82838_length_192_cov_1.019108_g74897_i0forward_frame_3 - 0.093 13.3 0.0 0.1 13.1 0.0 1.1 1 0 0 1 1 1 0 Agglutinin C-terminal DUF680 PF05079.12 NODE_82837_length_192_cov_1.019108_g74896_i0forward_frame_2 - 0.051 14.3 0.0 0.071 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF680) SH3_5 PF08460.10 NODE_82835_length_192_cov_1.019108_g74894_i0reverse_frame_3 - 0.19 11.9 0.0 0.26 11.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial SH3 domain Zn_Tnp_IS1595 PF12760.7 NODE_82830_length_192_cov_1.019108_g74889_i0reverse_frame_3 - 0.021 14.8 0.3 0.027 14.4 0.3 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Filo_glycop PF01611.16 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_2 - 0.094 11.6 0.0 0.094 11.6 0.0 1.1 1 0 0 1 1 1 0 Filovirus glycoprotein Atg29_N PF18388.1 NODE_82828_length_192_cov_1.019108_g74887_i0forward_frame_2 - 0.072 12.9 0.0 0.087 12.7 0.0 1.1 1 0 0 1 1 1 0 Atg29 N-terminal domain SLR1-BP PF07333.12 NODE_82824_length_192_cov_1.019108_g74883_i0reverse_frame_2 - 0.013 15.9 1.4 0.016 15.6 1.4 1.1 1 0 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) DUF2418 PF10332.9 NODE_82816_length_192_cov_1.019108_g74875_i0reverse_frame_2 - 0.08 13.5 1.0 0.094 13.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) YdjM PF04307.14 NODE_82815_length_192_cov_1.019108_g74874_i0forward_frame_2 - 0.19 11.0 0.0 0.19 11.0 0.0 1.0 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase HSP70 PF00012.20 NODE_82813_length_192_cov_1.070064_g74872_i0reverse_frame_3 - 0.21 9.7 0.0 0.21 9.7 0.0 1.0 1 0 0 1 1 1 0 Hsp70 protein MyTH4 PF00784.17 NODE_82813_length_192_cov_1.070064_g74872_i0forward_frame_3 - 0.025 15.1 0.3 0.028 14.9 0.3 1.1 1 0 0 1 1 1 0 MyTH4 domain DUF1732 PF08340.11 NODE_82813_length_192_cov_1.070064_g74872_i0forward_frame_2 - 0.1 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1732) PhoLip_ATPase_N PF16209.5 NODE_82810_length_192_cov_1.082803_g74869_i0forward_frame_3 - 0.03 14.0 0.5 0.033 13.9 0.5 1.1 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal DUF3270 PF11674.8 NODE_82810_length_192_cov_1.082803_g74869_i0forward_frame_3 - 0.034 14.3 0.5 0.037 14.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) zf-FLZ PF04570.14 NODE_82810_length_192_cov_1.082803_g74869_i0forward_frame_2 - 0.053 13.0 1.0 0.084 12.4 1.0 1.3 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 DUF3446 PF11928.8 NODE_82808_length_192_cov_1.101911_g74867_i0forward_frame_3 - 0.052 13.9 10.0 0.061 13.6 10.0 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain Herpes_pp85 PF04637.12 NODE_82808_length_192_cov_1.101911_g74867_i0forward_frame_3 - 3.9 5.8 5.1 3.8 5.8 5.1 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Cytochrome_C7 PF14522.6 NODE_82806_length_192_cov_1.108280_g74865_i0reverse_frame_2 - 0.052 13.6 0.0 0.058 13.4 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c Herpes_UL36 PF03586.13 NODE_82802_length_192_cov_1.140127_g74861_i0reverse_frame_3 - 0.058 12.7 0.0 0.066 12.5 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL36 tegument protein ATE_N PF04376.13 NODE_82800_length_192_cov_1.146497_g74859_i0reverse_frame_3 - 1e-10 41.9 0.1 1.2e-10 41.6 0.1 1.1 1 0 0 1 1 1 1 Arginine-tRNA-protein transferase, N terminus Hpt PF01627.23 NODE_82799_length_192_cov_1.146497_g74858_i0reverse_frame_3 - 0.062 13.6 0.1 0.074 13.3 0.1 1.1 1 0 0 1 1 1 0 Hpt domain zf-CCHC PF00098.23 NODE_82798_length_192_cov_1.152866_g74857_i0reverse_frame_2 - 0.0032 17.5 1.3 0.0047 16.9 1.3 1.3 1 0 0 1 1 1 1 Zinc knuckle Phi-29_GP16_7 PF06720.11 NODE_82794_length_192_cov_1.165605_g74853_i0reverse_frame_2 - 0.11 12.3 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 BacteriocIIc_cy PF12173.8 NODE_82790_length_192_cov_1.171975_g74849_i0reverse_frame_2 - 0.0095 16.2 0.7 0.011 16.0 0.7 1.1 1 0 0 1 1 1 1 Bacteriocin class IIc cyclic gassericin A-like Glycoprotein_G PF00802.19 NODE_82788_length_192_cov_1.191083_g74847_i0reverse_frame_2 - 0.17 11.2 0.5 0.19 11.1 0.5 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G ATP-synt_C PF00137.21 NODE_82787_length_192_cov_1.197452_g74846_i0forward_frame_3 - 0.013 15.8 3.3 0.017 15.5 3.3 1.1 1 0 0 1 1 1 0 ATP synthase subunit C SecE PF00584.20 NODE_82787_length_192_cov_1.197452_g74846_i0forward_frame_3 - 3.7 7.6 8.4 0.78 9.7 2.6 2.0 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex Phage_BR0599 PF09356.10 NODE_82787_length_192_cov_1.197452_g74846_i0forward_frame_2 - 0.0054 17.0 0.1 0.0062 16.8 0.1 1.1 1 0 0 1 1 1 1 Phage conserved hypothetical protein BR0599 Baculo_19 PF04798.12 NODE_82783_length_192_cov_1.248408_g74842_i0forward_frame_2 - 0.065 13.0 0.0 0.078 12.7 0.0 1.1 1 0 0 1 1 1 0 Baculovirus 19 kDa protein conserved region DEDD_Tnp_IS110 PF01548.17 NODE_82780_length_192_cov_1.267516_g74839_i0reverse_frame_3 - 4.6e-05 23.3 0.1 5.1e-05 23.2 0.1 1.0 1 0 0 1 1 1 1 Transposase Ten1_2 PF15490.6 NODE_82780_length_192_cov_1.267516_g74839_i0forward_frame_2 - 0.094 12.4 0.1 0.22 11.3 0.0 1.6 1 1 1 2 2 2 0 Telomere-capping, CST complex subunit AGH PF17558.2 NODE_82774_length_192_cov_1.267516_g74833_i0reverse_frame_3 - 0.0026 17.9 0.1 0.003 17.7 0.1 1.1 1 0 0 1 1 1 1 Androgenic gland hormone Kelch_3 PF13415.6 NODE_82772_length_192_cov_1.273885_g74831_i0reverse_frame_3 - 4.3 7.7 5.1 2.2 8.6 2.5 1.9 2 1 0 2 2 2 0 Galactose oxidase, central domain MatE PF01554.18 NODE_82770_length_192_cov_1.273885_g74829_i0forward_frame_2 - 0.0049 16.5 2.4 0.0053 16.4 2.4 1.0 1 0 0 1 1 1 1 MatE Frataxin_Cyay PF01491.16 NODE_82769_length_192_cov_1.273885_g74828_i0forward_frame_2 - 0.1 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Frataxin-like domain Lectin_leg-like PF03388.13 NODE_82765_length_192_cov_1.273885_g74824_i0forward_frame_3 - 0.071 12.4 0.0 0.076 12.4 0.0 1.0 1 0 0 1 1 1 0 Legume-like lectin family DUF4808 PF16066.5 NODE_82764_length_192_cov_1.273885_g74823_i0reverse_frame_3 - 0.062 13.8 0.1 0.067 13.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4808) Regulator_TrmB PF11495.8 NODE_82763_length_192_cov_1.273885_g74822_i0reverse_frame_2 - 0.11 11.7 0.1 0.12 11.5 0.1 1.0 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB Longin_2 PF18639.1 NODE_82759_length_192_cov_1.273885_g74818_i0reverse_frame_3 - 0.046 13.6 0.1 0.048 13.5 0.1 1.0 1 0 0 1 1 1 0 Yeast longin domain DUF1356 PF07092.12 NODE_82758_length_192_cov_1.273885_g74817_i0reverse_frame_2 - 0.034 13.4 0.0 0.038 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) Relaxase PF03432.14 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.0053 16.4 1.6 0.0053 16.4 1.6 1.0 1 0 0 1 1 1 1 Relaxase/Mobilisation nuclease domain Tup_N PF08581.10 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.0073 16.6 0.5 0.0073 16.6 0.5 1.4 2 0 0 2 2 2 1 Tup N-terminal Phage_Mu_Gam PF07352.12 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.0088 16.0 1.6 0.011 15.7 1.6 1.1 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein Spc7 PF08317.11 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.029 13.3 4.0 0.03 13.2 4.0 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein CENP-K PF11802.8 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.056 13.0 4.3 0.058 13.0 4.3 1.0 1 0 0 1 1 1 0 Centromere-associated protein K DUF1664 PF07889.12 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.096 12.7 0.9 0.11 12.6 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2393 PF09624.10 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.17 11.9 0.1 0.19 11.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) eIF-4B PF06273.11 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.4 9.7 2.6 0.43 9.6 2.6 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Pox_A_type_inc PF04508.12 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 2.4 8.2 5.9 5.8 6.9 1.0 2.8 2 1 0 2 2 2 0 Viral A-type inclusion protein repeat Viral_coat PF00729.18 NODE_82754_length_192_cov_1.312102_g74813_i0reverse_frame_3 - 0.087 12.7 0.1 0.087 12.7 0.1 1.0 1 0 0 1 1 1 0 Viral coat protein (S domain) Arena_ncap_C PF17290.2 NODE_82751_length_192_cov_1.318471_g74810_i0reverse_frame_2 - 0.071 12.4 0.6 0.071 12.4 0.6 1.0 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain MscS_TM PF12794.7 NODE_82747_length_192_cov_1.337580_g74806_i0forward_frame_3 - 0.025 13.4 0.2 0.026 13.4 0.2 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 L27_N PF09060.10 NODE_82745_length_192_cov_1.337580_g74804_i0reverse_frame_2 - 0.066 13.3 0.2 0.1 12.6 0.2 1.3 1 0 0 1 1 1 0 L27_N zf-H2C2 PF09337.10 NODE_82742_length_192_cov_1.350318_g74801_i0forward_frame_3 - 0.036 14.3 0.0 0.052 13.8 0.0 1.2 1 0 0 1 1 1 0 H2C2 zinc finger Tk-SP_N-pro PF18237.1 NODE_82741_length_192_cov_1.356688_g74800_i0reverse_frame_3 - 0.018 15.1 0.8 0.023 14.7 0.6 1.3 1 1 0 1 1 1 0 Tk-SP N-propeptide domain Fer4_11 PF13247.6 NODE_82740_length_192_cov_1.363057_g74799_i0reverse_frame_3 - 0.028 14.5 0.1 0.029 14.5 0.1 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain Peptidase_C2 PF00648.21 NODE_82740_length_192_cov_1.363057_g74799_i0reverse_frame_2 - 1.6e-05 24.1 0.0 1.7e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease HTH_6 PF01418.17 NODE_82739_length_192_cov_1.363057_g74798_i0reverse_frame_3 - 0.065 13.2 0.1 0.068 13.2 0.1 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family IMS_C PF11799.8 NODE_82732_length_192_cov_1.407643_g74791_i0forward_frame_2 - 0.044 14.5 0.0 0.051 14.3 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family C-terminal domain Mersacidin PF16934.5 NODE_82730_length_192_cov_1.420382_g74789_i0reverse_frame_2 - 2.6 7.9 7.0 12 5.8 2.6 2.1 1 1 1 2 2 2 0 Two-component Enterococcus faecalis cytolysin (EFC) DUF562 PF04763.12 NODE_82727_length_192_cov_1.433121_g74786_i0reverse_frame_3 - 0.014 14.9 0.2 0.014 14.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF562) DUF2244 PF10003.9 NODE_82725_length_192_cov_1.439490_g74784_i0reverse_frame_3 - 0.22 11.2 1.0 0.26 10.9 1.0 1.0 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) Fcf1 PF04900.12 NODE_82717_length_192_cov_1.471338_g74776_i0reverse_frame_3 - 0.075 13.4 0.1 0.084 13.3 0.1 1.1 1 0 0 1 1 1 0 Fcf1 Phosphonate-bd PF12974.7 NODE_82717_length_192_cov_1.471338_g74776_i0forward_frame_2 - 0.21 11.1 0.0 0.23 11.0 0.0 1.0 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein Pyr_redox_2 PF07992.14 NODE_82706_length_192_cov_1.503185_g74765_i0reverse_frame_3 - 1.5e-12 47.4 0.1 1.6e-12 47.3 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Antimicrobial19 PF08225.11 NODE_82697_length_192_cov_1.515924_g74756_i0forward_frame_2 - 2.1 8.0 5.6 2.9 7.6 0.2 2.8 3 0 0 3 3 3 0 Pseudin antimicrobial peptide SecD_SecF PF02355.16 NODE_82695_length_192_cov_1.522293_g74754_i0reverse_frame_2 - 0.049 13.0 0.0 0.051 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein export membrane protein DUF5121 PF17165.4 NODE_82690_length_192_cov_1.528662_g74749_i0forward_frame_3 - 0.026 15.0 1.0 0.029 14.8 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5121) Ac110_PIF PF07280.11 NODE_82686_length_192_cov_1.528662_g74745_i0forward_frame_3 - 1.2 9.0 6.1 0.14 11.9 2.0 1.8 2 0 0 2 2 2 0 Per os infectivity factor AC110 YusW PF14039.6 NODE_82685_length_192_cov_1.528662_g74744_i0forward_frame_2 - 0.018 15.5 0.2 1.8 9.1 0.0 2.0 1 1 1 2 2 2 0 YusW-like protein Lipoprotein_8 PF02030.15 NODE_82684_length_192_cov_1.528662_g74743_i0forward_frame_3 - 0.069 11.9 0.0 0.077 11.7 0.0 1.0 1 0 0 1 1 1 0 Hypothetical lipoprotein (MG045 family) Macscav_rec PF03523.13 NODE_82684_length_192_cov_1.528662_g74743_i0forward_frame_3 - 0.12 12.2 1.6 0.18 11.7 1.0 1.6 1 1 0 1 1 1 0 Macrophage scavenger receptor DDE_3 PF13358.6 NODE_82674_length_192_cov_1.541401_g74733_i0forward_frame_2 - 0.065 13.0 0.0 0.067 12.9 0.0 1.0 1 0 0 1 1 1 0 DDE superfamily endonuclease HlyIII PF03006.20 NODE_82672_length_192_cov_1.554140_g74731_i0forward_frame_2 - 0.022 14.5 0.0 0.022 14.5 0.0 1.1 1 0 0 1 1 1 0 Haemolysin-III related SapA PF02199.15 NODE_82671_length_192_cov_1.554140_g74730_i0forward_frame_2 - 0.021 15.1 0.9 0.028 14.7 0.9 1.2 1 0 0 1 1 1 0 Saposin A-type domain Period_C PF12114.8 NODE_82669_length_192_cov_1.585987_g74728_i0forward_frame_2 - 0.46 10.1 3.0 0.49 10.0 3.0 1.0 1 0 0 1 1 1 0 Period protein 2/3C-terminal region RepB PF07506.11 NODE_82666_length_192_cov_1.598726_g74725_i0reverse_frame_3 - 5e-06 26.7 0.0 5.2e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 RepB plasmid partitioning protein Dynactin_p62 PF05502.13 NODE_82657_length_192_cov_1.617834_g74716_i0forward_frame_2 - 0.34 9.6 2.2 0.37 9.5 2.2 1.0 1 0 0 1 1 1 0 Dynactin p62 family RVT_2 PF07727.14 NODE_82656_length_192_cov_1.617834_g74715_i0reverse_frame_3 - 3.8e-07 30.0 0.0 4.3e-07 29.8 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) SpoVAE PF14097.6 NODE_82656_length_192_cov_1.617834_g74715_i0forward_frame_2 - 0.095 12.3 0.0 0.095 12.3 0.0 1.0 1 0 0 1 1 1 0 Stage V sporulation protein AE1 Chorion_2 PF03964.15 NODE_82654_length_192_cov_1.636943_g74713_i0reverse_frame_3 - 0.078 13.8 0.6 0.087 13.7 0.6 1.1 1 0 0 1 1 1 0 Chorion family 2 RVT_1 PF00078.27 NODE_82654_length_192_cov_1.636943_g74713_i0reverse_frame_2 - 0.00025 20.6 0.0 0.00027 20.5 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) ThiF PF00899.21 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 9.2e-22 77.6 0.5 9.8e-22 77.5 0.5 1.0 1 0 0 1 1 1 1 ThiF family Shikimate_DH PF01488.20 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 0.00079 19.5 0.1 0.00086 19.4 0.1 1.0 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase FAD_binding_3 PF01494.19 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 0.012 14.9 0.7 0.012 14.9 0.7 1.0 1 0 0 1 1 1 0 FAD binding domain ELFV_dehydrog PF00208.21 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 0.057 13.1 0.3 0.058 13.1 0.3 1.0 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UDPG_MGDP_dh_N PF03721.14 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 0.14 11.7 0.3 0.15 11.6 0.3 1.0 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Atrophin-1 PF03154.15 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_3 - 0.044 12.1 0.6 0.042 12.2 0.6 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF2721 PF11026.8 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_2 - 0.00099 19.0 1.8 0.00099 19.0 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2721) DUF3915 PF13054.6 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_2 - 0.013 15.5 2.4 0.015 15.3 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_2 - 0.028 12.7 6.2 0.027 12.8 6.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF4519 PF15012.6 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_2 - 0.18 12.0 1.1 0.85 9.8 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4519) CENP-H PF05837.12 NODE_82645_length_192_cov_1.694268_g74704_i0reverse_frame_2 - 0.099 13.1 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) T_cell_tran_alt PF15128.6 NODE_82642_length_192_cov_1.707006_g74701_i0reverse_frame_3 - 0.036 13.9 0.2 0.038 13.8 0.2 1.1 1 0 0 1 1 1 0 T-cell leukemia translocation-altered PSD5 PF07637.11 NODE_82639_length_192_cov_1.726115_g74698_i0forward_frame_2 - 0.022 15.1 0.3 0.028 14.8 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1595) DUF759 PF05537.11 NODE_82638_length_192_cov_1.732484_g74697_i0reverse_frame_2 - 0.11 11.4 1.0 0.12 11.2 1.0 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF759) Big_9 PF17963.1 NODE_82635_length_192_cov_1.757962_g74694_i0forward_frame_3 - 0.04 14.7 1.7 0.063 14.0 1.7 1.4 1 1 0 1 1 1 0 Bacterial Ig domain DUF1410 PF07198.11 NODE_82633_length_192_cov_1.764331_g74692_i0reverse_frame_2 - 0.058 13.9 0.1 0.077 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1410) DUF5348 PF17295.2 NODE_82631_length_192_cov_1.770701_g74690_i0forward_frame_2 - 0.011 15.7 0.2 0.014 15.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5348) DUF572 PF04502.13 NODE_82628_length_192_cov_1.770701_g74687_i0reverse_frame_3 - 3.9e-18 66.2 3.3 4.1e-18 66.1 3.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) Trimer_CC PF08954.11 NODE_82627_length_192_cov_1.777070_g74686_i0reverse_frame_2 - 0.13 11.9 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Trimerisation motif SpoVG PF04026.12 NODE_82626_length_192_cov_1.777070_g74685_i0forward_frame_3 - 0.11 12.8 0.3 0.15 12.3 0.3 1.2 1 0 0 1 1 1 0 SpoVG DUF2686 PF10887.8 NODE_82623_length_192_cov_1.789809_g74682_i0forward_frame_3 - 3.8e-34 117.9 0.0 4e-34 117.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2686) DUF2023 PF09633.10 NODE_82622_length_192_cov_1.815287_g74681_i0reverse_frame_2 - 0.027 14.6 0.1 0.032 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2023) BRX PF08381.11 NODE_82620_length_192_cov_1.821656_g74679_i0reverse_frame_3 - 0.21 11.0 0.1 0.29 10.5 0.1 1.2 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 DUF4215 PF13948.6 NODE_82617_length_192_cov_1.840764_g74676_i0reverse_frame_3 - 2.3e-08 34.3 17.2 1.8e-05 25.1 9.3 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4215) KH_1 PF00013.29 NODE_82614_length_192_cov_1.840764_g74673_i0forward_frame_2 - 0.05 13.4 0.1 0.063 13.1 0.1 1.2 1 0 0 1 1 1 0 KH domain Herpes_U34 PF04541.13 NODE_82612_length_192_cov_1.878981_g74671_i0forward_frame_2 - 0.0096 15.2 0.2 0.01 15.1 0.2 1.0 1 0 0 1 1 1 1 Herpesvirus virion protein U34 GLTP PF08718.11 NODE_82610_length_192_cov_1.878981_g74669_i0reverse_frame_2 - 0.092 13.0 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Glycolipid transfer protein (GLTP) Defensin_beta PF00711.19 NODE_82609_length_192_cov_1.891720_g74668_i0reverse_frame_2 - 0.074 13.1 0.5 0.074 13.1 0.5 1.4 2 0 0 2 2 2 0 Beta defensin Gemini_AC4_5_2 PF08464.10 NODE_82607_length_192_cov_1.923567_g74666_i0reverse_frame_3 - 0.066 13.2 0.1 0.091 12.7 0.1 1.2 1 0 0 1 1 1 0 Geminivirus AC4/5 conserved region TSC22 PF01166.18 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 3.4e-05 24.0 2.7 5.1e-05 23.5 2.4 1.4 1 1 0 1 1 1 1 TSC-22/dip/bun family bZIP_1 PF00170.21 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.00069 19.7 3.3 0.00069 19.7 3.3 1.9 1 1 1 2 2 2 1 bZIP transcription factor HAP1_N PF04849.13 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.0043 16.3 0.8 0.0043 16.3 0.8 1.2 1 0 0 1 1 1 1 HAP1 N-terminal conserved region ZapB PF06005.12 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.03 14.8 3.5 0.038 14.4 3.5 1.4 1 1 0 1 1 1 0 Cell division protein ZapB bZIP_2 PF07716.15 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.037 14.1 0.5 0.037 14.1 0.5 1.8 2 0 0 2 2 2 0 Basic region leucine zipper Cnn_1N PF07989.11 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.048 13.8 5.1 0.33 11.1 5.1 1.9 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 DivIC PF04977.15 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.06 13.1 1.0 0.06 13.1 1.0 1.5 2 0 0 2 2 2 0 Septum formation initiator FlaC_arch PF05377.11 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.12 12.8 4.7 0.13 12.7 0.9 2.0 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) YabA PF06156.13 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.14 12.8 3.5 0.26 11.9 3.5 1.6 1 1 0 1 1 1 0 Initiation control protein YabA Desmo_N PF06771.11 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.17 12.3 2.3 0.52 10.7 2.3 1.8 1 1 0 1 1 1 0 Viral Desmoplakin N-terminus Raco_middle PF17651.1 NODE_82603_length_192_cov_1.980892_g74662_i0forward_frame_2 - 0.035 13.8 0.0 0.037 13.7 0.0 1.1 1 0 0 1 1 1 0 RACo middle region Importin_rep_3 PF18806.1 NODE_82600_length_192_cov_1.987261_g74659_i0reverse_frame_3 - 0.044 13.8 0.6 0.085 12.9 0.6 1.6 1 1 0 1 1 1 0 Importin 13 repeat EZH2_N PF18601.1 NODE_82598_length_192_cov_1.993631_g74657_i0reverse_frame_3 - 0.079 13.3 0.1 0.093 13.1 0.1 1.1 1 0 0 1 1 1 0 EZH2 N-terminal domain DUF3630 PF12305.8 NODE_82598_length_192_cov_1.993631_g74657_i0forward_frame_3 - 0.028 14.5 0.3 0.028 14.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3630) HGWP PF03578.15 NODE_82597_length_192_cov_2.000000_g74656_i0forward_frame_2 - 0.045 13.2 0.2 0.071 12.6 0.2 1.3 1 0 0 1 1 1 0 HGWP repeat Peptidase_U4 PF03419.13 NODE_82595_length_192_cov_2.012739_g74654_i0reverse_frame_3 - 0.15 11.3 0.8 0.17 11.1 0.8 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA 7tm_2 PF00002.24 NODE_82587_length_192_cov_2.050955_g74646_i0reverse_frame_3 - 0.0065 15.8 2.6 0.0071 15.7 2.6 1.0 1 0 0 1 1 1 1 7 transmembrane receptor (Secretin family) DUF5326 PF17260.2 NODE_82587_length_192_cov_2.050955_g74646_i0reverse_frame_3 - 0.067 13.3 2.6 0.08 13.1 2.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5326) ISET-FN3_linker PF16625.5 NODE_82584_length_192_cov_2.095541_g74643_i0forward_frame_2 - 0.12 12.9 0.0 0.15 12.6 0.0 1.1 1 0 0 1 1 1 0 Unstructured linking region I-set and fnIII on Brother of CDO Metallothio_Cad PF07846.11 NODE_82577_length_192_cov_2.222930_g74636_i0forward_frame_3 - 0.21 11.7 0.2 0.34 11.1 0.2 1.2 1 0 0 1 1 1 0 Metallothionein family RICH PF05062.12 NODE_82576_length_192_cov_2.235669_g74635_i0forward_frame_2 - 0.0016 18.8 1.3 0.0019 18.5 1.3 1.1 1 0 0 1 1 1 1 RICH domain Prp19 PF08606.11 NODE_82575_length_192_cov_2.235669_g74634_i0reverse_frame_2 - 0.13 12.3 0.4 0.39 10.7 0.3 1.7 1 1 1 2 2 2 0 Prp19/Pso4-like Transgly_assoc PF04226.13 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 1.9e-17 63.2 12.5 2.4e-17 62.9 12.5 1.1 1 0 0 1 1 1 1 Transglycosylase associated protein DUF2306 PF10067.9 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 0.045 14.0 1.8 0.045 13.9 1.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2306) Baculo_gp64 PF03273.13 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 0.13 11.1 1.2 0.11 11.2 1.2 1.0 1 0 0 1 1 1 0 Baculovirus gp64 envelope glycoprotein family Gly-zipper_Omp PF13488.6 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 0.55 10.3 7.9 2.9 7.9 7.9 1.9 1 1 0 1 1 1 0 Glycine zipper DUF2207 PF09972.9 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 0.81 8.4 6.3 0.93 8.2 6.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4282 PF14110.6 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 1.2 9.9 7.4 1.4 9.7 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) TraL PF07178.11 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 1.7 9.2 5.4 0.66 10.5 1.9 1.8 1 1 1 2 2 2 0 TraL protein Halogen_Hydrol PF10112.9 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 2.4 8.1 4.0 2.8 7.9 4.0 1.1 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF3169 PF11368.8 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 8.9 5.7 10.1 22 4.4 10.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3169) S4 PF01479.25 NODE_82574_length_192_cov_2.242038_g74633_i0reverse_frame_2 - 0.019 14.7 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 S4 domain RRN9 PF10680.9 NODE_82573_length_192_cov_2.242038_g74632_i0forward_frame_3 - 0.023 15.0 0.1 0.026 14.8 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor Copine PF07002.16 NODE_82572_length_192_cov_2.254777_g74631_i0reverse_frame_3 - 1.1e-12 47.9 0.2 1.2e-12 47.8 0.2 1.0 1 0 0 1 1 1 1 Copine Kinesin PF00225.23 NODE_82568_length_192_cov_2.280255_g74627_i0reverse_frame_3 - 1.8e-26 92.8 0.1 1.9e-26 92.8 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Macin PF14865.6 NODE_82568_length_192_cov_2.280255_g74627_i0forward_frame_3 - 0.072 13.6 0.0 0.081 13.5 0.0 1.2 1 0 0 1 1 1 0 Macin DUF553 PF04473.12 NODE_82567_length_192_cov_2.286624_g74626_i0reverse_frame_3 - 0.12 11.9 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase-like domain SGTA_dimer PF16546.5 NODE_82567_length_192_cov_2.286624_g74626_i0forward_frame_2 - 0.012 15.4 0.1 0.014 15.1 0.1 1.2 1 0 0 1 1 1 0 Homodimerisation domain of SGTA Nbl1_Borealin_N PF10444.9 NODE_82566_length_192_cov_2.286624_g74625_i0reverse_frame_3 - 0.044 13.4 0.0 0.06 13.0 0.0 1.2 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal RICTOR_M PF14666.6 NODE_82566_length_192_cov_2.286624_g74625_i0forward_frame_2 - 0.00054 19.7 0.4 0.00067 19.4 0.4 1.0 1 0 0 1 1 1 1 Rapamycin-insensitive companion of mTOR, middle domain DUF5638 PF18688.1 NODE_82563_length_192_cov_2.375796_g74622_i0reverse_frame_2 - 0.0023 18.2 3.8 0.0024 18.1 3.8 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5638) Holin_BlyA PF05102.12 NODE_82563_length_192_cov_2.375796_g74622_i0reverse_frame_2 - 0.081 12.9 0.2 0.13 12.3 0.2 1.4 1 0 0 1 1 1 0 holin, BlyA family NEMP PF10225.9 NODE_82563_length_192_cov_2.375796_g74622_i0forward_frame_3 - 0.067 12.8 5.4 0.075 12.7 5.4 1.0 1 0 0 1 1 1 0 NEMP family GET2 PF08690.10 NODE_82561_length_192_cov_2.407643_g74620_i0forward_frame_2 - 0.16 11.6 0.5 0.16 11.6 0.5 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 Response_reg PF00072.24 NODE_82557_length_192_cov_2.452229_g74616_i0forward_frame_3 - 1.1e-16 61.0 0.0 1.1e-16 61.0 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain zf-B_box PF00643.24 NODE_82550_length_192_cov_2.598726_g74609_i0forward_frame_2 - 0.0093 16.1 0.8 0.012 15.8 0.8 1.1 1 0 0 1 1 1 1 B-box zinc finger Cuticle_2 PF08184.11 NODE_82548_length_192_cov_2.656051_g74607_i0forward_frame_3 - 0.1 12.6 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Cuticle protein 7 isoform family CTXphi_pIII-N1 PF16710.5 NODE_82547_length_192_cov_2.668790_g74606_i0reverse_frame_2 - 0.12 12.5 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII MLD PF11647.8 NODE_82544_length_192_cov_2.713376_g74603_i0forward_frame_3 - 0.057 13.7 0.1 0.068 13.4 0.1 1.1 1 0 0 1 1 1 0 Membrane Localization Domain PrcB_C PF14343.6 NODE_82544_length_192_cov_2.713376_g74603_i0forward_frame_3 - 0.14 12.3 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 PrcB C-terminal TMEM71 PF15121.6 NODE_82542_length_192_cov_2.777070_g74601_i0forward_frame_2 - 0.061 13.0 0.2 0.071 12.8 0.2 1.0 1 0 0 1 1 1 0 TMEM71 protein family GAPES2 PF17156.4 NODE_82541_length_192_cov_2.802548_g74600_i0reverse_frame_3 - 7.5e-39 133.6 0.5 8.1e-39 133.5 0.5 1.0 1 0 0 1 1 1 1 Gammaproteobacterial periplasmic sensor domain YL1_C PF08265.11 NODE_82541_length_192_cov_2.802548_g74600_i0forward_frame_3 - 0.19 11.5 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 YL1 nuclear protein C-terminal domain NAD_binding_4 PF07993.12 NODE_82529_length_192_cov_3.617834_g74588_i0reverse_frame_2 - 8.1e-15 54.7 0.0 8.6e-15 54.6 0.0 1.0 1 0 0 1 1 1 1 Male sterility protein CLP_protease PF00574.23 NODE_82524_length_192_cov_4.108280_g74583_i0forward_frame_2 - 1.7e-07 31.3 0.0 1.9e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Clp protease TACC_C PF05010.14 NODE_82523_length_192_cov_4.108280_g74582_i0forward_frame_3 - 0.013 15.3 0.7 0.014 15.2 0.7 1.0 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal CP12 PF02672.15 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 0.01 16.6 3.6 0.013 16.3 3.6 1.1 1 0 0 1 1 1 0 CP12 domain Phage_GP20 PF06810.11 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 0.045 13.6 15.2 0.051 13.4 15.2 1.1 1 0 0 1 1 1 0 Phage minor structural protein GP20 DUF4795 PF16043.5 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 0.074 12.6 11.1 0.08 12.5 11.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) TMPIT PF07851.13 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 1.4 8.1 9.7 1.4 8.1 9.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF4407 PF14362.6 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 2.6 7.3 7.2 2.7 7.2 7.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Tho2 PF11262.8 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 4 6.6 10.5 4.4 6.4 10.5 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Ribosomal_60s PF00428.19 NODE_82512_length_192_cov_20.732484_g74571_i0reverse_frame_2 - 0.64 10.6 6.5 0.83 10.3 6.5 1.3 1 1 0 1 1 1 0 60s Acidic ribosomal protein Kin17_mid PF10357.9 NODE_82511_length_192_cov_21.057325_g74570_i0reverse_frame_2 - 0.11 12.5 0.3 0.12 12.3 0.3 1.1 1 0 0 1 1 1 0 Domain of Kin17 curved DNA-binding protein DUF1825 PF08855.10 NODE_82510_length_192_cov_23.630573_g74569_i0reverse_frame_3 - 0.14 12.1 0.1 0.17 11.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) cPLA2_C2 PF18695.1 NODE_82507_length_192_cov_25.541401_g74566_i0forward_frame_3 - 0.19 11.7 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Cytosolic phospholipases A2 C2-domain Microvir_J PF04726.13 NODE_82504_length_192_cov_28.159236_g74563_i0reverse_frame_2 - 7.6 6.6 8.2 2 8.4 1.4 2.6 2 1 1 3 3 3 0 Microvirus J protein Antistasin PF02822.14 NODE_82494_length_192_cov_33.726115_g74553_i0forward_frame_3 - 0.038 14.6 1.3 0.059 14.0 1.3 1.3 1 0 0 1 1 1 0 Antistasin family Rz1 PF06085.11 NODE_82492_length_192_cov_34.732484_g74551_i0reverse_frame_2 - 0.08 12.7 5.3 0.18 11.6 0.3 2.2 2 0 0 2 2 2 0 Lipoprotein Rz1 precursor # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks399.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks399.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks399.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks399.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:27:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ank_2 PF12796.7 ORF42111 - 6e-07 30.0 0.0 7.9e-06 26.4 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) UVR PF02151.19 ORF42111 - 4.1e-06 26.4 7.3 1.3e-05 24.8 5.0 2.5 2 0 0 2 2 2 1 UvrB/uvrC motif Ank_4 PF13637.6 ORF42111 - 1.1e-05 25.8 0.1 0.0007 20.1 0.0 3.0 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF42111 - 7.6e-05 22.9 0.2 0.0013 19.0 0.0 2.7 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF42111 - 0.00047 20.5 0.1 0.0089 16.4 0.0 2.8 3 0 0 3 3 3 1 Ankyrin repeat SH3_3 PF08239.11 ORF42111 - 0.0034 17.6 0.0 0.0068 16.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial SH3 domain Ank_3 PF13606.6 ORF42111 - 0.02 15.4 0.0 0.41 11.4 0.0 2.7 2 0 0 2 2 2 0 Ankyrin repeat Thaumatin PF00314.17 ORF42049 - 1.7e-19 70.3 7.7 2.9e-19 69.6 7.7 1.4 1 1 0 1 1 1 1 Thaumatin family Trehalase PF01204.18 ORF40208 - 1.8e-127 426.3 0.2 2.1e-127 426.1 0.2 1.0 1 0 0 1 1 1 1 Trehalase Bac_rhamnosid6H PF17389.2 ORF40208 - 0.00017 21.0 0.0 0.00025 20.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DUF346 PF03984.13 ORF40208 - 0.021 14.6 1.8 0.024 14.4 0.1 2.0 2 0 0 2 2 2 0 Repeat of unknown function (DUF346) Glyco_hydro_63 PF03200.16 ORF40208 - 0.029 13.2 0.0 0.045 12.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 63 C-terminal domain ZZ PF00569.17 ORF37429 - 2.9e-12 46.2 9.7 7.8e-12 44.8 9.7 1.7 1 0 0 1 1 1 1 Zinc finger, ZZ type PB1 PF00564.24 ORF37429 - 1.2e-11 44.4 0.2 1.4e-09 37.7 0.0 2.7 2 0 0 2 2 2 2 PB1 domain Ubiquitin_2 PF14560.6 ORF37429 - 0.029 14.8 0.5 0.57 10.7 0.1 2.6 2 0 0 2 2 2 0 Ubiquitin-like domain ODC_AZ PF02100.17 ORF37400 - 0.012 15.6 0.2 0.026 14.5 0.2 1.5 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme Ins145_P3_rec PF08709.11 ORF36164 - 0.003 16.8 0.1 0.0084 15.3 0.0 1.8 2 0 0 2 2 2 1 Inositol 1,4,5-trisphosphate/ryanodine receptor DUF2806 PF10987.8 ORF36164 - 0.017 15.0 1.2 0.033 14.1 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2806) Patatin PF01734.22 ORF35394 - 6e-15 56.0 0.0 3.6e-14 53.4 0.0 2.0 1 1 0 1 1 1 1 Patatin-like phospholipase A-2_8-polyST PF07388.11 ORF35394 - 0.11 11.1 0.0 6.9 5.1 0.0 2.3 2 0 0 2 2 2 0 Alpha-2,8-polysialyltransferase (POLYST) HEAT PF02985.22 ORF331 - 3e-16 58.1 2.9 0.12 12.6 0.0 5.4 5 0 0 5 5 5 5 HEAT repeat HEAT_2 PF13646.6 ORF331 - 9.1e-13 48.4 0.2 0.0085 16.5 0.1 4.4 2 2 2 4 4 4 4 HEAT repeats Cnd1 PF12717.7 ORF331 - 1.2e-10 41.7 6.2 1.6e-05 25.0 0.6 3.1 1 1 2 3 3 3 2 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF331 - 2.3e-09 37.7 1.6 7.9e-06 26.4 0.2 2.4 2 0 0 2 2 2 2 Vacuolar 14 Fab1-binding region Adaptin_N PF01602.20 ORF331 - 6.8e-08 31.5 5.2 1e-07 30.9 5.2 1.2 1 0 0 1 1 1 1 Adaptin N terminal region HEAT_EZ PF13513.6 ORF331 - 2.7e-07 31.0 0.1 0.15 12.6 0.0 4.3 2 2 2 4 4 4 3 HEAT-like repeat Arm PF00514.23 ORF331 - 1.7e-06 27.9 0.8 0.15 12.2 0.0 4.8 5 0 0 5 5 5 1 Armadillo/beta-catenin-like repeat V-ATPase_H_C PF11698.8 ORF331 - 3.7e-05 23.8 6.5 0.0034 17.5 0.4 2.5 3 0 0 3 3 3 2 V-ATPase subunit H CLASP_N PF12348.8 ORF331 - 0.016 14.8 0.4 8.1 5.9 0.0 2.9 2 1 1 3 3 3 0 CLASP N terminal IFRD PF05004.13 ORF331 - 0.029 13.5 1.9 2.2 7.3 0.0 2.8 2 2 1 3 3 3 0 Interferon-related developmental regulator (IFRD) RTP1_C1 PF10363.9 ORF331 - 0.037 14.2 2.1 0.66 10.2 0.1 2.8 3 0 0 3 3 3 0 Required for nuclear transport of RNA pol II C-terminus 1 RICTOR_V PF14668.6 ORF331 - 0.041 14.1 0.1 0.77 10.0 0.0 2.8 3 0 0 3 3 3 0 Rapamycin-insensitive companion of mTOR, domain 5 DUF4595 PF15283.6 ORF331 - 0.1 12.7 0.2 0.18 11.9 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4595) with porin-like fold Proteasom_PSMB PF10508.9 ORF331 - 0.13 10.7 6.0 0.46 8.9 0.1 2.2 1 1 0 2 2 2 0 Proteasome non-ATPase 26S subunit CoA_transf_3 PF02515.17 ORF22524 - 1.6e-101 340.1 0.0 1.8e-101 339.9 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III PARP PF00644.20 ORF20551 - 6.5e-46 156.4 0.0 1.1e-45 155.7 0.0 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain PARP_reg PF02877.14 ORF20551 - 8.5e-35 119.8 4.6 1.5e-34 119.0 4.6 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase, regulatory domain DUF812 PF05667.11 ORF20551 - 0.012 14.6 4.3 0.015 14.2 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Baculo_PEP_C PF04513.12 ORF20551 - 0.3 11.1 2.5 0.5 10.4 1.1 1.8 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DivIC PF04977.15 ORF20551 - 2.1 8.2 5.0 1.8 8.4 0.4 2.3 2 0 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF20551 - 6.2 7.1 8.9 3.2 8.0 3.4 2.4 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Glyco_hydro_7 PF00840.20 ORF20495 - 1.2e-138 462.5 1.7 1.5e-138 462.2 1.7 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Duffy_binding PF05424.11 ORF20495 - 0.13 12.3 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Duffy binding domain PC4 PF02229.16 ORF20495 - 0.14 11.8 0.0 0.67 9.6 0.0 2.0 2 0 0 2 2 2 0 Transcriptional Coactivator p15 (PC4) RRM_1 PF00076.22 ORF18466 - 3.9e-17 61.8 0.0 6.6e-17 61.1 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KH_1 PF00013.29 ORF18466 - 2.4e-14 52.9 0.0 1.1e-11 44.4 0.0 2.8 3 0 0 3 3 3 2 KH domain RRM_7 PF16367.5 ORF18466 - 0.017 15.2 0.0 0.089 12.9 0.0 2.0 2 0 0 2 2 2 0 RNA recognition motif KH_2 PF07650.17 ORF18466 - 0.021 14.6 0.0 0.041 13.7 0.0 1.4 1 0 0 1 1 1 0 KH domain Nup35_RRM_2 PF14605.6 ORF18466 - 0.17 11.9 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Thaumatin PF00314.17 ORF15885 - 1.7e-19 70.3 7.7 2.9e-19 69.6 7.7 1.4 1 1 0 1 1 1 1 Thaumatin family Ycf54 PF10674.9 ORF14599 - 0.029 14.6 0.5 0.076 13.3 0.5 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2488) Pal1 PF08316.11 ORF14599 - 3.6 8.3 10.0 0.094 13.5 1.6 2.5 2 1 1 3 3 3 0 Pal1 cell morphology protein Exostosin PF03016.15 ORF14353 - 0.015 14.6 0.0 0.022 14.0 0.0 1.1 1 0 0 1 1 1 0 Exostosin family CC2-LZ PF16516.5 ORF109919 - 0.016 15.6 7.2 0.016 15.6 7.2 3.6 5 0 0 5 5 5 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator TRAF_BIRC3_bd PF16673.5 ORF109919 - 0.026 14.3 4.3 0.026 14.3 4.3 2.3 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain Sulfatase_C PF14707.6 ORF109919 - 0.1 13.3 6.8 0.41 11.4 0.7 2.9 3 0 0 3 3 3 0 C-terminal region of aryl-sulfatase Tropomyosin_1 PF12718.7 ORF109919 - 1.3 9.2 36.3 0.03 14.5 9.4 4.4 4 1 0 4 4 4 0 Tropomyosin like Pkinase PF00069.25 ORF109130 - 4.9e-48 163.8 0.0 7.1e-48 163.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF109130 - 1.5e-35 122.7 0.0 2e-35 122.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF109130 - 0.00034 19.5 0.1 0.00039 19.3 0.1 1.4 1 1 0 1 1 1 1 Fungal protein kinase CLP1_P PF16575.5 ORF10763 - 4.2e-31 108.2 0.0 5.6e-31 107.8 0.0 1.2 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop Clp1 PF06807.14 ORF10763 - 1.6e-16 60.8 0.1 3.7e-16 59.6 0.1 1.6 1 0 0 1 1 1 1 Pre-mRNA cleavage complex II protein Clp1 SRP54 PF00448.22 ORF10763 - 0.082 12.5 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ATP_bind_1 PF03029.17 ORF10763 - 0.089 12.6 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein FtsK_SpoIIIE PF01580.18 ORF10763 - 0.1 12.0 0.0 0.2 11.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family Amidase02_C PF12123.8 ORF104448 - 0.011 15.4 7.2 0.21 11.3 0.7 2.8 3 0 0 3 3 3 0 N-acetylmuramoyl-l-alanine amidase MgrB PF13998.6 ORF104448 - 0.048 13.5 1.5 10 6.1 0.1 2.4 2 0 0 2 2 2 0 MgrB protein ARL17 PF15840.5 ORF104448 - 0.096 13.1 0.8 8.5 6.8 0.0 2.7 3 0 0 3 3 3 0 ADP-ribosylation factor-like protein 17 Dioxygenase_N PF04444.14 ORF104448 - 0.24 11.3 0.6 11 6.0 0.1 2.3 2 0 0 2 2 2 0 Catechol dioxygenase N terminus EphA2_TM PF14575.6 NODE_18155_length_1038_cov_292.843470_g13831_i1forward_frame_1 - 0.01 16.7 0.2 0.032 15.1 0.0 2.0 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain SLATT_6 PF18169.1 NODE_18155_length_1038_cov_292.843470_g13831_i1forward_frame_1 - 0.011 15.4 0.2 0.022 14.4 0.2 1.5 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 DUF5385 PF17359.2 NODE_18155_length_1038_cov_292.843470_g13831_i1forward_frame_1 - 0.025 14.1 0.5 0.042 13.4 0.2 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5385) ECSCR PF15820.5 NODE_18155_length_1038_cov_292.843470_g13831_i1forward_frame_1 - 0.053 13.4 0.1 0.053 13.4 0.1 2.3 3 0 0 3 3 3 0 Endothelial cell-specific chemotaxis regulator OSTbeta PF15048.6 NODE_18155_length_1038_cov_292.843470_g13831_i1forward_frame_1 - 0.14 12.3 0.1 0.34 11.1 0.1 1.6 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein EphA2_TM PF14575.6 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.0078 17.1 0.3 0.032 15.1 0.0 2.2 3 0 0 3 3 3 1 Ephrin type-A receptor 2 transmembrane domain SLATT_6 PF18169.1 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.01 15.4 0.2 0.022 14.4 0.2 1.5 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 DUF5385 PF17359.2 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.025 14.2 0.5 0.042 13.4 0.2 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5385) ECSCR PF15820.5 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.031 14.1 1.6 0.053 13.4 0.1 2.0 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator OSTbeta PF15048.6 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.12 12.5 0.1 0.34 11.1 0.1 1.7 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein WRC PF08879.10 NODE_18102_length_1040_cov_132.074627_g13797_i0reverse_frame_2 - 7.9e-05 22.3 16.4 0.00014 21.4 10.3 3.4 2 1 1 3 3 3 1 WRC Seadorna_Vp10 PF07322.11 NODE_18102_length_1040_cov_132.074627_g13797_i0reverse_frame_2 - 0.21 11.0 0.1 0.3 10.5 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus Vp10 DUF2773 PF10971.8 NODE_18079_length_1041_cov_3.483101_g13779_i0reverse_frame_3 - 8.8e-36 121.9 3.3 2.8e-35 120.3 2.6 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2773) CheZ PF04344.13 NODE_18072_length_1041_cov_114.708748_g13773_i0reverse_frame_3 - 0.00044 20.2 2.3 0.00087 19.3 2.3 1.4 1 0 0 1 1 1 1 Chemotaxis phosphatase, CheZ FliJ PF02050.16 NODE_18072_length_1041_cov_114.708748_g13773_i0reverse_frame_3 - 0.047 13.9 10.1 0.042 14.1 8.3 1.8 1 1 0 1 1 1 0 Flagellar FliJ protein FapA PF03961.13 NODE_18072_length_1041_cov_114.708748_g13773_i0reverse_frame_3 - 0.08 11.5 9.0 0.11 11.0 9.0 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF2570 PF10828.8 NODE_18072_length_1041_cov_114.708748_g13773_i0reverse_frame_3 - 3 7.7 8.6 1.6 8.5 6.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) Exonuc_VII_L PF02601.15 NODE_18072_length_1041_cov_114.708748_g13773_i0reverse_frame_3 - 3.4 7.2 11.6 0.68 9.4 8.2 1.5 2 0 0 2 2 2 0 Exonuclease VII, large subunit Flavi_NS5 PF00972.20 ORF99960 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF97475 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Methyltransf_5 PF01795.19 ORF95136 - 7.9e-124 413.2 0.0 9.1e-124 413.0 0.0 1.0 1 0 0 1 1 1 1 MraW methylase family Methyltransf_31 PF13847.6 ORF95136 - 0.0031 17.3 0.0 0.19 11.5 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF95136 - 0.0081 16.8 0.0 1.9 9.3 0.0 2.5 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_24 PF13578.6 ORF95136 - 0.015 16.3 0.0 0.5 11.4 0.0 2.4 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF95136 - 0.034 14.8 0.0 6.3 7.5 0.0 2.5 2 1 0 2 2 2 0 Methyltransferase domain Auxin_repressed PF05564.12 ORF9107 - 0.16 12.7 1.9 0.9 10.2 0.0 2.6 2 2 0 2 2 2 0 Dormancy/auxin associated protein Peptidase_C48 PF02902.19 ORF89698 - 1.9e-19 70.4 0.0 5e-19 69.0 0.0 1.6 1 1 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Peptidase_C97 PF05903.14 ORF86534 - 1.1e-21 77.2 0.0 2.1e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 PPPDE putative peptidase domain EF-hand_7 PF13499.6 ORF86534 - 2.9e-10 40.4 0.6 6.2e-10 39.4 0.6 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF86534 - 5.2e-10 38.1 1.3 0.00011 21.5 0.0 4.1 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF86534 - 1.5e-09 37.0 0.3 0.00018 21.1 0.0 4.0 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF86534 - 1e-08 34.3 1.1 0.00014 21.2 0.0 3.7 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF86534 - 0.047 14.0 0.8 0.75 10.1 0.1 2.3 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF86534 - 0.074 12.9 2.9 9.4 6.2 0.1 2.8 3 0 0 3 3 3 0 EF-hand domain pair DUF533 PF04391.12 ORF86534 - 0.21 11.2 0.6 0.38 10.3 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF533) WD40 PF00400.32 ORF85596 - 4.5e-10 40.0 2.2 0.00023 21.9 0.0 5.1 6 0 0 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF85596 - 0.0073 16.6 0.0 0.094 13.0 0.0 2.5 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain MbeD_MobD PF04899.12 ORF85596 - 0.073 13.2 0.1 0.14 12.3 0.1 1.4 1 0 0 1 1 1 0 MbeD/MobD like Flavi_NS5 PF00972.20 ORF82742 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Pkinase PF00069.25 ORF80870 - 2.2e-60 204.3 0.2 2.7e-60 204.0 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF80870 - 1e-18 67.5 0.0 1.5e-18 67.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF80870 - 5.8e-09 36.2 0.0 4.7e-06 26.7 0.0 2.2 1 1 0 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF80870 - 8.7e-05 22.2 0.5 0.00018 21.2 0.5 1.5 1 1 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF80870 - 0.00025 19.9 0.1 0.0059 15.4 0.0 2.2 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF80870 - 0.0019 17.6 0.1 0.0033 16.8 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF80870 - 0.0087 15.7 0.2 0.018 14.6 0.2 1.5 1 0 0 1 1 1 1 Choline/ethanolamine kinase DUF5072 PF16807.5 ORF80870 - 0.022 14.8 0.3 1.4 9.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5072) FTA2 PF13095.6 ORF80870 - 0.072 12.7 0.2 0.21 11.2 0.1 1.8 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF80870 - 0.081 12.2 0.0 0.14 11.4 0.0 1.4 1 0 0 1 1 1 0 Kinase-like Flavi_NS5 PF00972.20 ORF78537 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF72401 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF71702 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF71062 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF6787 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF67283 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF66375 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Sulfotransfer_3 PF13469.6 ORF6614 - 4.6e-05 23.9 0.1 0.046 14.1 0.0 2.3 1 1 0 2 2 2 2 Sulfotransferase family Sulfotransfer_4 PF17784.1 ORF6614 - 0.085 12.7 0.1 0.72 9.6 0.1 2.1 1 1 0 1 1 1 0 Sulfotransferase domain Trp_Tyr_perm PF03222.13 ORF65882 - 2.3e-43 148.7 13.4 4.6e-43 147.8 13.4 1.4 1 1 0 1 1 1 1 Tryptophan/tyrosine permease family DUF3493 PF11998.8 ORF65882 - 1.8 8.8 0.0 1.8 8.8 0.0 3.3 4 0 0 4 4 4 0 Low psii accumulation1 / Rep27 Peptidase_M99_C PF17129.4 ORF62655 - 0.53 10.5 0.1 0.53 10.5 0.1 3.3 2 1 0 3 3 3 0 C-terminal domain of metallo-carboxypeptidase Baculo_PEP_C PF04513.12 ORF60260 - 0.00034 20.6 12.3 0.23 11.5 1.9 3.9 1 1 1 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus Ribonuc_2-5A PF06479.12 ORF60260 - 0.04 14.1 3.6 0.12 12.5 0.1 3.1 1 1 2 3 3 3 0 Ribonuclease 2-5A FliT PF05400.13 ORF60260 - 0.13 13.1 8.7 4 8.3 0.6 4.2 1 1 3 4 4 4 0 Flagellar protein FliT DUF2605 PF10792.9 ORF60260 - 0.63 10.0 4.8 1.4 8.9 0.6 3.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2605) Allexi_40kDa PF05549.11 ORF60260 - 2.9 7.3 12.5 1.4 8.3 2.5 2.7 1 1 2 3 3 3 0 Allexivirus 40kDa protein DUF1664 PF07889.12 ORF60260 - 3.8 7.6 10.1 2.2 8.4 0.5 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Peptidase_M99_C PF17129.4 ORF59054 - 0.53 10.5 0.1 0.53 10.5 0.1 3.3 2 1 0 3 3 3 0 C-terminal domain of metallo-carboxypeptidase Flavi_NS5 PF00972.20 ORF5854 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Peptidase_C97 PF05903.14 ORF56316 - 1.1e-21 77.2 0.0 2.1e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 PPPDE putative peptidase domain EF-hand_7 PF13499.6 ORF56316 - 2.9e-10 40.4 0.6 6.2e-10 39.4 0.6 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF56316 - 5.2e-10 38.1 1.3 0.00011 21.5 0.0 4.1 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF56316 - 1.5e-09 37.0 0.3 0.00018 21.1 0.0 4.0 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF56316 - 1e-08 34.3 1.1 0.00014 21.2 0.0 3.7 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF56316 - 0.047 14.0 0.8 0.75 10.1 0.1 2.3 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF56316 - 0.074 12.9 2.9 9.4 6.2 0.1 2.8 3 0 0 3 3 3 0 EF-hand domain pair DUF533 PF04391.12 ORF56316 - 0.21 11.2 0.6 0.38 10.3 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF533) Ras PF00071.22 ORF55079 - 1.2e-09 38.0 0.0 1.8e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Ras family KAsynt_C_assoc PF16197.5 ORF55079 - 0.0063 17.0 0.0 0.015 15.8 0.0 1.6 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension DUF1364 PF07102.12 ORF55079 - 0.048 13.5 0.2 0.048 13.5 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1364) CFEM PF05730.11 ORF55079 - 0.1 12.7 2.9 0.27 11.4 2.9 1.7 1 0 0 1 1 1 0 CFEM domain Flavi_NS5 PF00972.20 ORF53181 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase adh_short PF00106.25 ORF51744 - 8.8e-28 97.1 0.0 9.1e-25 87.3 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF51744 - 1.2e-13 51.1 0.0 3.3e-12 46.5 0.0 2.1 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF51744 - 2.6e-05 24.2 0.0 4.2e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 KR domain Glyco_transf_21 PF13506.6 ORF51177 - 0.066 12.7 0.0 0.13 11.7 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 21 Flavi_NS5 PF00972.20 ORF49840 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase EF-hand_6 PF13405.6 ORF49548 - 0.00077 19.2 0.3 3 8.0 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF49548 - 0.015 15.7 1.8 0.24 11.9 0.1 3.2 3 1 1 4 4 4 0 EF-hand domain pair Arc_PepC PF06819.11 ORF49548 - 0.14 12.3 0.2 0.52 10.4 0.0 2.1 3 0 0 3 3 3 0 Archaeal Peptidase A24 C-terminal Domain Flavi_NS5 PF00972.20 ORF48584 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF48246 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF47919 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF46623 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF46199 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF40033 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Nuc_sug_transp PF04142.15 ORF3946 - 1.9e-14 53.6 15.7 2.6e-14 53.1 15.7 1.2 1 1 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF3946 - 0.0023 18.1 6.0 0.0023 18.1 6.0 2.2 2 0 0 2 2 2 1 EamA-like transporter family Flavi_NS5 PF00972.20 ORF39141 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF35158 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase GFO_IDH_MocA PF01408.22 ORF34690 - 5.9e-17 62.6 0.3 9.1e-17 62.0 0.3 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Flavi_NS5 PF00972.20 ORF33214 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Trans_coact PF16805.5 ORF31088 - 0.017 15.2 0.0 0.035 14.2 0.0 1.5 1 0 0 1 1 1 0 Phage late-transcription coactivator Flavi_NS5 PF00972.20 ORF31035 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF27085 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF22459 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF19772 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase NAD_binding_1 PF00175.21 ORF19253 - 5.3e-28 97.8 0.0 9.5e-28 97.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF19253 - 7.9e-27 93.5 0.0 1.3e-26 92.9 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF19253 - 0.00014 22.0 0.0 0.0046 17.1 0.0 2.3 1 1 0 2 2 2 1 Ferric reductase NAD binding domain Peptidase_M99_C PF17129.4 ORF19230 - 0.53 10.5 0.1 0.53 10.5 0.1 3.3 2 1 0 3 3 3 0 C-terminal domain of metallo-carboxypeptidase 7tm_6 PF02949.20 ORF16813 - 0.0088 15.2 3.9 0.026 13.6 0.2 2.2 2 0 0 2 2 2 1 7tm Odorant receptor ArfGap PF01412.18 ORF16813 - 0.015 15.3 2.3 0.022 14.8 1.1 1.9 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf V_ATPase_I PF01496.19 ORF16813 - 0.33 8.8 12.5 0.42 8.5 12.5 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1704 PF08014.11 ORF16813 - 1.1 8.1 10.8 2.1 7.3 10.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1704) Ribosomal_60s PF00428.19 ORF16813 - 1.2 9.8 9.9 0.18 12.4 2.8 2.4 2 0 0 2 2 2 0 60s Acidic ribosomal protein ABC_tran PF00005.27 ORF16754 - 4.1e-38 131.0 0.0 6.6e-38 130.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF16754 - 2.7e-09 37.3 0.5 0.0013 18.7 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF16754 - 1.1e-08 34.8 0.0 1.8e-08 34.1 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TOBE_3 PF12857.7 ORF16754 - 4e-08 33.0 0.0 2.7e-07 30.4 0.0 2.3 1 1 1 2 2 2 1 TOBE-like domain AAA_16 PF13191.6 ORF16754 - 9.6e-05 22.8 1.2 0.00074 19.9 1.2 2.1 1 1 0 1 1 1 1 AAA ATPase domain CysA_C_terminal PF17850.1 ORF16754 - 0.00036 21.0 0.2 0.0019 18.7 0.0 2.3 2 0 0 2 2 2 1 CysA C-terminal regulatory domain NACHT PF05729.12 ORF16754 - 0.00066 19.6 0.4 0.033 14.1 0.1 2.2 2 0 0 2 2 2 1 NACHT domain RsgA_GTPase PF03193.16 ORF16754 - 0.00088 19.2 0.1 0.0017 18.3 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase DLIC PF05783.11 ORF16754 - 0.00098 18.1 0.0 0.0016 17.4 0.0 1.3 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA_22 PF13401.6 ORF16754 - 0.0011 19.2 0.1 0.0039 17.5 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 ORF16754 - 0.0011 19.4 0.0 0.011 16.1 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 ORF16754 - 0.0012 18.6 0.0 0.13 12.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain ATPase PF06745.13 ORF16754 - 0.0013 18.1 0.3 1.1 8.6 0.0 2.2 2 0 0 2 2 2 2 KaiC AAA_28 PF13521.6 ORF16754 - 0.0015 18.8 0.1 0.0039 17.4 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF16754 - 0.0031 17.2 0.1 0.0068 16.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF16754 - 0.0031 18.0 0.1 0.0057 17.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 ORF16754 - 0.0049 17.1 0.1 0.058 13.6 0.1 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit TniB PF05621.11 ORF16754 - 0.0055 16.1 0.0 0.31 10.4 0.0 2.4 2 1 0 2 2 2 1 Bacterial TniB protein AAA_30 PF13604.6 ORF16754 - 0.013 15.2 0.1 0.033 13.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF16754 - 0.014 14.8 0.0 1.2 8.5 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein AAA_18 PF13238.6 ORF16754 - 0.029 14.9 0.0 0.074 13.6 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.6 ORF16754 - 0.032 13.8 0.3 0.45 10.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 ORF16754 - 0.032 14.1 0.1 0.22 11.4 0.0 2.0 2 0 0 2 2 2 0 NTPase ABC_ATPase PF09818.9 ORF16754 - 0.036 12.9 0.4 2.2 7.0 0.0 2.7 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.6 ORF16754 - 0.039 14.1 2.2 0.31 11.2 2.2 2.2 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF16754 - 0.071 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRP54 PF00448.22 ORF16754 - 0.076 12.6 0.0 0.24 11.0 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_14 PF13173.6 ORF16754 - 0.085 12.9 0.0 0.65 10.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF16754 - 0.1 12.6 0.3 0.43 10.6 0.0 2.1 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) T2SSE PF00437.20 ORF16754 - 0.11 11.5 0.2 0.79 8.7 0.1 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein Roc PF08477.13 ORF16754 - 0.12 12.6 0.0 2 8.7 0.0 2.2 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase NB-ARC PF00931.22 ORF16754 - 0.12 11.6 0.0 0.21 10.7 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain cobW PF02492.19 ORF16754 - 0.12 11.9 0.4 0.28 10.7 0.1 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain APS_kinase PF01583.20 ORF16754 - 0.12 12.2 0.2 17 5.3 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase RecA PF00154.21 ORF16754 - 0.14 11.6 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein DEAD PF00270.29 ORF16754 - 0.18 11.6 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase PEPCK_ATP PF01293.20 ORF16754 - 0.22 10.1 0.1 4.8 5.7 0.0 2.0 2 0 0 2 2 2 0 Phosphoenolpyruvate carboxykinase Flavi_NS5 PF00972.20 ORF16711 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase ArsP_1 PF03773.13 ORF16483 - 4.5e-40 137.7 32.8 2.2e-29 102.5 24.7 2.1 1 1 1 2 2 2 2 Predicted permease Flavi_NS5 PF00972.20 ORF1465 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF14083 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF13687 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase FG-GAP_2 PF14312.6 ORF111088 - 8.9e-16 57.9 15.8 7.6e-10 38.9 1.4 2.8 3 0 0 3 3 3 2 FG-GAP repeat RIFIN PF02009.16 ORF111088 - 2.6 7.9 14.2 4.4 7.1 14.2 1.4 1 0 0 1 1 1 0 Rifin TFIIA PF03153.13 ORF111088 - 9.5 6.1 10.1 12 5.7 10.1 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit SOBP PF15279.6 ORF111088 - 9.6 6.7 21.2 13 6.3 21.2 1.1 1 0 0 1 1 1 0 Sine oculis-binding protein Mga PF05043.13 ORF110753 - 0.001 19.6 2.7 0.05 14.2 0.2 2.9 2 1 0 2 2 2 1 Mga helix-turn-helix domain DivIC PF04977.15 ORF110753 - 0.0047 16.7 2.4 0.0047 16.7 2.4 6.6 5 2 2 7 7 6 2 Septum formation initiator HAP1_N PF04849.13 ORF110753 - 0.0054 16.0 10.4 0.0054 16.0 10.4 3.7 2 1 2 4 4 4 2 HAP1 N-terminal conserved region TMF_DNA_bd PF12329.8 ORF110753 - 0.0068 16.4 4.1 0.0068 16.4 4.1 6.7 3 3 4 7 7 5 1 TATA element modulatory factor 1 DNA binding OmpH PF03938.14 ORF110753 - 0.02 15.2 10.4 0.02 15.2 10.4 3.8 2 2 0 3 3 3 0 Outer membrane protein (OmpH-like) Trans_reg_C PF00486.28 ORF110753 - 0.058 13.5 0.0 0.42 10.7 0.0 2.3 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal HTH_53 PF18606.1 ORF110753 - 0.17 11.6 0.0 19 5.0 0.0 2.7 2 0 0 2 2 2 0 Zap helix turn helix N-terminal domain TolA_bind_tri PF16331.5 ORF110753 - 0.29 11.3 27.4 4.8 7.3 1.7 6.4 2 1 4 6 6 6 0 TolA binding protein trimerisation DASH_Hsk3 PF08227.11 ORF110753 - 1.1 9.7 17.0 0.6 10.5 0.7 5.0 5 0 0 5 5 5 0 DASH complex subunit Hsk3 like UPF0242 PF06785.11 ORF110753 - 1.1 9.3 61.6 0.24 11.5 18.8 3.7 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus Syntaxin-6_N PF09177.11 ORF110753 - 1.1 9.8 27.0 0.062 13.9 2.5 4.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal GAS PF13851.6 ORF110753 - 1.2 8.4 64.9 0.11 11.8 22.1 3.9 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding NPV_P10 PF05531.12 ORF110753 - 1.3 9.5 25.7 4.8 7.7 5.2 5.1 2 1 2 4 4 4 0 Nucleopolyhedrovirus P10 protein Taxilin PF09728.9 ORF110753 - 1.7 7.7 62.9 1.3e+02 1.5 62.9 3.0 1 1 0 1 1 1 0 Myosin-like coiled-coil protein Sec34 PF04136.15 ORF110753 - 2.5 8.0 26.6 1 9.2 1.1 3.6 3 0 0 3 3 3 0 Sec34-like family Atg14 PF10186.9 ORF110753 - 4 6.4 49.4 1.5 7.9 19.6 3.4 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 CorA PF01544.18 ORF110753 - 9.3 5.5 15.5 9 5.5 8.6 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein H-kinase_dim PF02895.14 ORF110753 - 9.6 6.7 13.0 4.3 7.8 1.0 4.3 1 1 2 3 3 3 0 Signal transducing histidine kinase, homodimeric domain Flavi_NS5 PF00972.20 ORF107780 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Peptidase_C97 PF05903.14 ORF103056 - 1.1e-21 77.2 0.0 2.1e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 PPPDE putative peptidase domain EF-hand_7 PF13499.6 ORF103056 - 2.9e-10 40.4 0.6 6.2e-10 39.4 0.6 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF103056 - 5.2e-10 38.1 1.3 0.00011 21.5 0.0 4.1 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF103056 - 1.5e-09 37.0 0.3 0.00018 21.1 0.0 4.0 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF103056 - 1e-08 34.3 1.1 0.00014 21.2 0.0 3.7 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF103056 - 0.047 14.0 0.8 0.75 10.1 0.1 2.3 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF103056 - 0.074 12.9 2.9 9.4 6.2 0.1 2.8 3 0 0 3 3 3 0 EF-hand domain pair DUF533 PF04391.12 ORF103056 - 0.21 11.2 0.6 0.38 10.3 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF533) PRANC PF09372.10 ORF10198 - 0.0012 19.1 0.8 0.03 14.6 0.3 2.7 2 0 0 2 2 2 1 PRANC domain ABC_tran PF00005.27 ORF101341 - 4.1e-38 131.0 0.0 6.6e-38 130.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF101341 - 2.7e-09 37.3 0.5 0.0013 18.7 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF101341 - 1.1e-08 34.8 0.0 1.8e-08 34.1 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TOBE_3 PF12857.7 ORF101341 - 4e-08 33.0 0.0 2.7e-07 30.4 0.0 2.3 1 1 1 2 2 2 1 TOBE-like domain AAA_16 PF13191.6 ORF101341 - 9.6e-05 22.8 1.2 0.00074 19.9 1.2 2.1 1 1 0 1 1 1 1 AAA ATPase domain CysA_C_terminal PF17850.1 ORF101341 - 0.00036 21.0 0.2 0.0019 18.7 0.0 2.3 2 0 0 2 2 2 1 CysA C-terminal regulatory domain NACHT PF05729.12 ORF101341 - 0.00066 19.6 0.4 0.033 14.1 0.1 2.2 2 0 0 2 2 2 1 NACHT domain RsgA_GTPase PF03193.16 ORF101341 - 0.00088 19.2 0.1 0.0017 18.3 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase DLIC PF05783.11 ORF101341 - 0.00098 18.1 0.0 0.0016 17.4 0.0 1.3 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA_22 PF13401.6 ORF101341 - 0.0011 19.2 0.1 0.0039 17.5 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 ORF101341 - 0.0011 19.4 0.0 0.011 16.1 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 ORF101341 - 0.0012 18.6 0.0 0.13 12.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain ATPase PF06745.13 ORF101341 - 0.0013 18.1 0.3 1.1 8.6 0.0 2.2 2 0 0 2 2 2 2 KaiC AAA_28 PF13521.6 ORF101341 - 0.0015 18.8 0.1 0.0039 17.4 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF101341 - 0.0031 17.2 0.1 0.0068 16.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF101341 - 0.0031 18.0 0.1 0.0057 17.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 ORF101341 - 0.0049 17.1 0.1 0.058 13.6 0.1 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit TniB PF05621.11 ORF101341 - 0.0055 16.1 0.0 0.31 10.4 0.0 2.4 2 1 0 2 2 2 1 Bacterial TniB protein AAA_30 PF13604.6 ORF101341 - 0.013 15.2 0.1 0.033 13.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF101341 - 0.014 14.8 0.0 1.2 8.5 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein AAA_18 PF13238.6 ORF101341 - 0.029 14.9 0.0 0.074 13.6 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.6 ORF101341 - 0.032 13.8 0.3 0.45 10.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 ORF101341 - 0.032 14.1 0.1 0.22 11.4 0.0 2.0 2 0 0 2 2 2 0 NTPase ABC_ATPase PF09818.9 ORF101341 - 0.036 12.9 0.4 2.2 7.0 0.0 2.7 2 1 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.6 ORF101341 - 0.039 14.1 2.2 0.31 11.2 2.2 2.2 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF101341 - 0.071 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRP54 PF00448.22 ORF101341 - 0.076 12.6 0.0 0.24 11.0 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_14 PF13173.6 ORF101341 - 0.085 12.9 0.0 0.65 10.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF101341 - 0.1 12.6 0.3 0.43 10.6 0.0 2.1 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) T2SSE PF00437.20 ORF101341 - 0.11 11.5 0.2 0.79 8.7 0.1 2.1 2 0 0 2 2 2 0 Type II/IV secretion system protein Roc PF08477.13 ORF101341 - 0.12 12.6 0.0 2 8.7 0.0 2.2 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase NB-ARC PF00931.22 ORF101341 - 0.12 11.6 0.0 0.21 10.7 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain cobW PF02492.19 ORF101341 - 0.12 11.9 0.4 0.28 10.7 0.1 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain APS_kinase PF01583.20 ORF101341 - 0.12 12.2 0.2 17 5.3 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase RecA PF00154.21 ORF101341 - 0.14 11.6 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein DEAD PF00270.29 ORF101341 - 0.18 11.6 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase PEPCK_ATP PF01293.20 ORF101341 - 0.22 10.1 0.1 4.8 5.7 0.0 2.0 2 0 0 2 2 2 0 Phosphoenolpyruvate carboxykinase Fip1 PF05182.13 ORF100790 - 2.6e-16 58.8 1.3 5.4e-16 57.8 1.3 1.5 1 0 0 1 1 1 1 Fip1 motif CTU2 PF10288.9 NODE_18249_length_1035_cov_20231.927000_g13909_i0reverse_frame_1 - 0.13 12.5 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 zf-RING_2 PF13639.6 NODE_18249_length_1035_cov_20231.927000_g13909_i0forward_frame_1 - 4e-07 30.3 12.4 9.4e-07 29.1 12.4 1.7 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_18249_length_1035_cov_20231.927000_g13909_i0forward_frame_1 - 0.00049 20.3 10.1 0.0011 19.2 10.1 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_18249_length_1035_cov_20231.927000_g13909_i0forward_frame_1 - 0.0032 17.5 2.3 0.007 16.4 2.3 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 NODE_18249_length_1035_cov_20231.927000_g13909_i0forward_frame_1 - 0.017 15.0 12.2 0.051 13.4 12.2 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_18249_length_1035_cov_20231.927000_g13909_i0forward_frame_1 - 0.069 13.0 10.2 0.17 11.7 10.2 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_18249_length_1035_cov_20231.927000_g13909_i0forward_frame_1 - 1.8 8.4 15.4 0.11 12.3 9.7 2.0 2 0 0 2 2 2 0 RING-like zinc finger RINGv PF12906.7 NODE_18249_length_1035_cov_20231.927000_g13909_i0forward_frame_1 - 9.5 6.4 10.8 24 5.2 10.8 1.7 1 0 0 1 1 1 0 RING-variant domain FA_hydroxylase PF04116.13 ORF95800 - 1.5e-07 31.8 10.9 1.5e-07 31.8 10.9 2.4 2 1 0 2 2 2 1 Fatty acid hydroxylase superfamily ODC_AZ PF02100.17 ORF94976 - 0.012 15.6 0.2 0.026 14.5 0.2 1.5 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme DUF4200 PF13863.6 ORF92885 - 1.4e-06 28.6 35.1 1.4e-06 28.6 35.1 2.9 3 1 0 3 3 3 1 Domain of unknown function (DUF4200) SKA2 PF16740.5 ORF92885 - 0.018 14.8 10.5 0.018 14.8 10.5 3.6 2 1 2 4 4 4 0 Spindle and kinetochore-associated protein 2 Phycobilisome PF00502.19 ORF92885 - 0.03 14.2 1.1 0.03 14.2 1.1 3.4 2 2 1 3 3 3 0 Phycobilisome protein DUF1465 PF07323.12 ORF92885 - 0.031 14.1 0.7 0.031 14.1 0.7 3.3 1 1 1 3 3 3 0 Protein of unknown function (DUF1465) Lant_dehydr_C PF14028.6 ORF92885 - 2.1 7.8 6.7 3.5 7.1 0.6 2.3 2 0 0 2 2 2 0 Lantibiotic biosynthesis dehydratase C-term Pox_A_type_inc PF04508.12 ORF92885 - 2.3 8.2 7.6 19 5.3 3.7 3.7 2 1 1 3 3 3 0 Viral A-type inclusion protein repeat AATF-Che1 PF13339.6 ORF92885 - 5.1 7.8 32.5 2.1 9.0 8.1 2.4 2 0 0 2 2 2 0 Apoptosis antagonizing transcription factor ERM PF00769.19 ORF92885 - 5.7 6.7 47.5 13 5.5 14.7 2.2 1 1 1 2 2 2 0 Ezrin/radixin/moesin family p450 PF00067.22 ORF92735 - 2.2e-07 30.0 0.0 3.1e-07 29.5 0.0 1.3 1 0 0 1 1 1 1 Cytochrome P450 Kinase-PPPase PF03618.14 ORF90536 - 7.6e-70 235.6 0.0 8.9e-70 235.4 0.0 1.0 1 0 0 1 1 1 1 Kinase/pyrophosphorylase AAA_18 PF13238.6 ORF90536 - 0.043 14.4 0.0 0.11 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain UbiA PF01040.18 ORF89003 - 7.5e-18 64.7 20.4 1.2e-17 64.1 20.4 1.3 1 0 0 1 1 1 1 UbiA prenyltransferase family Gar1 PF04410.14 ORF83536 - 5.8e-17 61.9 0.3 1.3e-16 60.7 0.0 1.6 2 0 0 2 2 2 1 Gar1/Naf1 RNA binding region HAD_2 PF13419.6 ORF82531 - 6.4e-20 72.0 0.0 1.1e-19 71.2 0.0 1.4 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Maf PF02545.14 ORF82531 - 5.4e-19 68.7 0.0 1.4e-18 67.3 0.0 1.7 2 0 0 2 2 2 1 Maf-like protein Hydrolase PF00702.26 ORF82531 - 4.4e-09 36.9 0.1 7.6e-08 32.9 0.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF82531 - 0.00043 20.7 0.1 0.00079 19.9 0.1 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF82531 - 0.014 15.5 0.0 0.5 10.5 0.0 2.5 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase PP-binding PF00550.25 ORF82397 - 3.8e-05 24.0 0.1 7.1e-05 23.1 0.1 1.5 1 0 0 1 1 1 1 Phosphopantetheine attachment site Acetyltransf_1 PF00583.25 ORF82397 - 0.00032 20.9 0.0 0.0005 20.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Pkinase PF00069.25 ORF76244 - 1.7e-62 211.2 0.8 2.2e-62 210.8 0.8 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF76244 - 4e-20 72.2 0.0 7.9e-20 71.2 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF76244 - 4.7e-08 33.3 0.0 9.5e-06 25.7 0.1 2.2 1 1 0 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF76244 - 2.3e-05 24.1 0.6 5.4e-05 22.9 0.6 1.6 1 1 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF76244 - 0.00011 21.1 0.1 0.0026 16.6 0.0 2.2 2 0 0 2 2 2 1 Fungal protein kinase Choline_kinase PF01633.20 ORF76244 - 0.016 14.8 0.2 0.057 13.0 0.1 1.8 1 1 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 ORF76244 - 0.043 13.2 0.7 0.13 11.6 0.6 1.8 1 1 1 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF76244 - 0.045 13.1 0.0 0.091 12.1 0.0 1.5 1 0 0 1 1 1 0 Kinase-like PGK PF00162.19 ORF74547 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF74547 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) PGK PF00162.19 ORF71753 - 2e-113 379.2 1.9 2.3e-113 379.0 1.9 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF71753 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) ATP_bind_3 PF01171.20 ORF70890 - 2.5e-20 73.0 0.0 4.9e-20 72.0 0.0 1.5 1 1 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 ORF70890 - 0.0081 16.2 0.0 0.038 14.0 0.0 1.9 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Nmad3 PF18754.1 ORF70890 - 0.073 12.6 0.1 0.34 10.4 0.0 1.9 2 0 0 2 2 2 0 Nucleotide modification associated domain 3 Ldh_1_C PF02866.18 ORF70834 - 5.9e-33 114.2 0.0 9.5e-33 113.5 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 ORF70834 - 1.4e-29 103.0 0.0 2.1e-29 102.4 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain AAA_12 PF13087.6 ORF64072 - 2.5e-29 102.4 0.0 3.8e-29 101.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF64072 - 0.00087 19.1 0.2 0.0019 18.1 0.2 1.5 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 ORF64072 - 0.0032 17.3 0.0 0.024 14.4 0.0 2.3 2 0 0 2 2 2 1 UvrD-like helicase C-terminal domain PGK PF00162.19 ORF60084 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF60084 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) PseudoU_synth_2 PF00849.22 ORF55022 - 5.8e-19 68.7 0.0 9.4e-19 68.1 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase Thg1 PF04446.12 ORF53073 - 8.2e-20 71.1 0.0 1.2e-19 70.6 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase PGK PF00162.19 ORF52990 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF52990 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) PGK PF00162.19 ORF51622 - 2.1e-113 379.1 1.9 2.4e-113 378.9 1.9 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF51622 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) SpoU_methylase PF00588.19 ORF40541 - 5e-28 98.0 0.0 7.6e-28 97.5 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 ORF40541 - 5.3e-13 49.0 0.0 1.1e-12 48.0 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding VWA PF00092.28 ORF39344 - 0.00033 21.0 0.0 0.00052 20.3 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain Peptidase_M42 PF05343.14 ORF34790 - 2.7e-84 282.7 0.0 4e-84 282.1 0.0 1.3 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 ORF34790 - 6.4e-05 22.7 0.0 0.046 13.4 0.0 2.3 2 0 0 2 2 2 2 Peptidase family M28 Peptidase_M18 PF02127.15 ORF34790 - 0.00013 21.0 0.1 0.00036 19.5 0.1 1.6 1 1 1 2 2 2 1 Aminopeptidase I zinc metalloprotease (M18) PGK PF00162.19 ORF3122 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF3122 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) Pkinase PF00069.25 ORF24634 - 2.9e-62 210.4 0.7 3.8e-62 210.0 0.7 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24634 - 4e-20 72.2 0.0 7.9e-20 71.2 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF24634 - 4.7e-08 33.2 0.0 9.5e-06 25.7 0.1 2.2 1 1 0 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF24634 - 2.4e-05 24.0 0.6 5.4e-05 22.9 0.6 1.5 1 1 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF24634 - 0.00012 21.1 0.1 0.0026 16.6 0.0 2.2 2 0 0 2 2 2 1 Fungal protein kinase Choline_kinase PF01633.20 ORF24634 - 0.018 14.7 0.2 0.057 13.0 0.1 1.7 1 1 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 ORF24634 - 0.044 13.1 0.7 0.13 11.6 0.6 1.8 1 1 1 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF24634 - 0.045 13.0 0.0 0.091 12.1 0.0 1.5 1 0 0 1 1 1 0 Kinase-like FTA2 PF13095.6 ORF24634 - 0.085 12.5 0.2 0.4 10.3 0.1 2.1 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 PP2C_C PF07830.13 ORF23778 - 0.057 13.9 3.3 1.3 9.5 0.2 3.2 3 0 0 3 3 3 0 Protein serine/threonine phosphatase 2C, C-terminal domain Thg1 PF04446.12 ORF20717 - 8.2e-20 71.1 0.0 1.2e-19 70.6 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Rotamase PF00639.21 ORF20047 - 9.1e-09 36.2 0.0 2.8e-08 34.6 0.0 1.9 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF20047 - 0.00018 22.0 1.0 0.0013 19.3 0.3 2.3 2 1 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF20047 - 0.011 16.6 1.4 0.023 15.5 0.1 2.2 2 0 0 2 2 2 0 PPIC-type PPIASE domain DUF2188 PF09954.9 ORF17684 - 0.018 15.2 0.6 0.063 13.4 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2188) Terminase_4 PF05119.12 ORF17684 - 0.059 13.8 0.1 0.15 12.5 0.1 1.8 1 0 0 1 1 1 0 Phage terminase, small subunit AP2 PF00847.20 ORF17684 - 0.15 12.3 12.6 5.2 7.4 3.0 3.7 3 0 0 3 3 3 0 AP2 domain Actin PF00022.19 ORF16595 - 1.1e-68 231.8 0.0 1.9e-68 231.0 0.0 1.3 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF16595 - 0.00027 19.9 0.0 0.05 12.4 0.0 2.2 2 0 0 2 2 2 2 MreB/Mbl protein FtsA PF14450.6 ORF16595 - 0.015 15.7 0.0 0.027 14.9 0.0 1.5 1 1 0 1 1 1 0 Cell division protein FtsA baeRF_family10 PF18854.1 ORF16595 - 0.022 15.0 0.0 0.043 14.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 10 PGK PF00162.19 ORF110414 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF110414 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) GFO_IDH_MocA PF01408.22 ORF109304 - 5.8e-28 98.1 0.0 8.8e-28 97.6 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 ORF109304 - 2.6e-16 59.7 0.0 4.6e-16 58.9 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 ORF109304 - 1.4e-05 25.7 0.0 2.7e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain PBECR3 PF18812.1 ORF109304 - 0.041 13.8 0.0 0.098 12.6 0.0 1.6 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 Response_reg PF00072.24 ORF109304 - 0.16 12.1 0.0 0.32 11.2 0.0 1.5 1 0 0 1 1 1 0 Response regulator receiver domain PGK PF00162.19 ORF104006 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF104006 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) Nuc_sug_transp PF04142.15 ORF102340 - 3.3e-75 253.2 4.8 3.8e-75 253.0 4.8 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter UAA PF08449.11 ORF102340 - 2.3e-07 30.3 7.8 3.4e-07 29.8 7.8 1.2 1 0 0 1 1 1 1 UAA transporter family ATP19 PF11022.8 ORF102340 - 0.22 11.9 2.1 0.94 9.9 0.0 2.7 3 0 0 3 3 3 0 ATP synthase subunit K EamA PF00892.20 ORF102340 - 0.34 11.1 22.5 0.64 10.2 10.6 3.0 3 1 0 3 3 3 0 EamA-like transporter family STT3 PF02516.14 ORF102340 - 0.79 8.6 9.7 1.5 7.6 0.5 2.1 2 0 0 2 2 2 0 Oligosaccharyl transferase STT3 subunit PSI_PsaE PF02427.17 NODE_18392_length_1032_cov_58.590772_g14018_i0reverse_frame_1 - 0.2 11.3 0.2 0.4 10.4 0.2 1.4 1 0 0 1 1 1 0 Photosystem I reaction centre subunit IV / PsaE EphA2_TM PF14575.6 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 0.013 16.3 0.0 0.029 15.2 0.0 1.6 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain FCSD-flav_bind PF09242.11 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 0.14 12.6 0.2 1.9 8.9 0.0 2.8 2 1 1 3 3 3 0 Flavocytochrome c sulphide dehydrogenase, flavin-binding O-antigen_lig PF13425.6 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 0.47 9.2 7.2 0.73 8.6 7.2 1.4 1 1 0 1 1 1 0 O-antigen ligase like membrane protein Ly49 PF08391.10 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 1.6 9.1 10.2 0.13 12.6 2.2 2.8 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region DUF1189 PF06691.11 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 6.2 6.3 13.3 1.2 8.6 4.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1189) PknH_C PF14032.6 ORF99883 - 0.056 13.3 0.2 0.099 12.5 0.2 1.3 1 0 0 1 1 1 0 PknH-like extracellular domain GyrB_insert PF18053.1 ORF96727 - 1.4e-56 190.9 0.1 2.2e-56 190.3 0.1 1.3 1 0 0 1 1 1 1 DNA gyrase B subunit insert domain DNA_gyraseB_C PF00986.21 ORF96727 - 1.6e-31 108.2 0.2 3.6e-31 107.1 0.2 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus Toprim PF01751.22 ORF96727 - 4.5e-08 33.2 0.0 1.3e-07 31.8 0.0 1.8 1 0 0 1 1 1 1 Toprim domain Spindle_Spc25 PF08234.12 ORF96727 - 0.036 14.3 0.0 0.11 12.7 0.0 1.8 2 0 0 2 2 2 0 Chromosome segregation protein Spc25 Pkinase PF00069.25 ORF92842 - 4.6e-76 255.7 0.0 6.2e-76 255.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92842 - 3.2e-34 118.4 0.0 4.6e-34 117.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF92842 - 0.0012 18.3 0.1 0.0019 17.6 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF92842 - 0.003 17.5 0.0 0.0064 16.4 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF92842 - 0.0032 16.8 0.0 0.14 11.5 0.0 2.4 1 1 0 2 2 2 1 Kinase-like Ank_2 PF12796.7 ORF92208 - 0.016 15.8 0.2 0.15 12.6 0.1 2.2 1 1 0 1 1 1 0 Ankyrin repeats (3 copies) BTB PF00651.31 ORF92208 - 0.084 13.1 0.7 1.4 9.2 0.1 2.3 2 0 0 2 2 2 0 BTB/POZ domain Ank_5 PF13857.6 ORF92208 - 0.094 13.1 0.2 0.27 11.6 0.0 1.9 2 0 0 2 2 2 0 Ankyrin repeats (many copies) PAP_assoc PF03828.19 ORF86339 - 3.3e-10 40.0 0.0 1.1e-09 38.3 0.0 2.0 2 0 0 2 2 2 1 Cid1 family poly A polymerase Syntaxin-18_N PF10496.9 ORF85814 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus Peptidase_C26 PF07722.13 ORF85432 - 2.9e-35 122.0 0.0 2.5e-34 119.0 0.0 2.2 2 1 0 2 2 2 1 Peptidase C26 GATase PF00117.28 ORF85432 - 5e-07 29.7 0.0 7.9e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I RepB PF07506.11 ORF81709 - 0.013 15.6 1.1 0.067 13.3 0.2 2.1 2 0 0 2 2 2 0 RepB plasmid partitioning protein PP2C_C PF07830.13 ORF81709 - 0.32 11.5 5.3 2.2 8.8 0.3 3.2 3 0 0 3 3 3 0 Protein serine/threonine phosphatase 2C, C-terminal domain Photo_RC PF00124.19 ORF79179 - 5.6e-85 284.7 16.1 6.7e-85 284.4 16.1 1.0 1 0 0 1 1 1 1 Photosynthetic reaction centre protein SBP_bac_8 PF13416.6 ORF7442 - 2.6e-37 129.2 11.7 3e-37 129.0 11.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 ORF7442 - 2.3e-31 109.9 9.8 3.2e-31 109.5 9.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 ORF7442 - 0.00012 21.6 0.2 0.045 13.2 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein PABP PF00658.18 ORF72122 - 1.5e-24 85.9 0.3 2.3e-24 85.3 0.3 1.3 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain RRM_1 PF00076.22 ORF72122 - 1e-18 66.9 0.0 1.6e-18 66.3 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Albumin_I PF08027.11 ORF68358 - 2.3 7.9 5.5 1.7 8.3 2.3 2.5 3 0 0 3 3 3 0 Albumin I chain b HhH-GPD PF00730.25 ORF55225 - 2.1e-16 60.3 0.0 3.3e-16 59.7 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein NUDIX_4 PF14815.6 ORF55225 - 1.2e-14 54.2 0.0 2.8e-14 53.0 0.0 1.7 1 0 0 1 1 1 1 NUDIX domain HHH PF00633.23 ORF55225 - 7.8e-10 38.1 0.0 1.8e-09 36.9 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 ORF55225 - 0.00082 19.9 0.0 0.0054 17.3 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 ORF55225 - 0.0021 18.1 0.0 3.2 7.9 0.0 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif NUDIX PF00293.28 ORF55225 - 0.0067 16.5 0.0 0.01 15.8 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain Whib PF02467.16 ORF55225 - 0.015 15.9 0.4 0.045 14.4 0.4 1.8 1 0 0 1 1 1 0 Transcription factor WhiB Cdd1 PF11731.8 ORF55225 - 0.051 13.8 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus EndIII_4Fe-2S PF10576.9 ORF55225 - 3.3 8.2 10.1 6.1 7.3 10.1 1.5 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III Ank_2 PF12796.7 ORF52122 - 5.1e-13 49.4 0.0 1.1e-12 48.3 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Acetyltransf_1 PF00583.25 ORF52122 - 1.6e-12 47.7 0.0 5.9e-12 45.9 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Ank_4 PF13637.6 ORF52122 - 4.1e-12 46.4 0.1 9e-09 35.7 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF52122 - 2.3e-10 39.8 0.0 6.9e-05 22.9 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF52122 - 2.2e-07 31.0 0.0 0.00068 19.9 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF52122 - 2.4e-07 30.9 0.0 0.051 14.1 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Acetyltransf_10 PF13673.7 ORF52122 - 3.4e-07 30.3 0.0 1.6e-06 28.0 0.0 2.0 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF52122 - 7.3e-07 29.5 0.1 1.9e-06 28.2 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF52122 - 3.9e-06 26.7 0.0 0.00014 21.8 0.0 2.6 2 0 0 2 2 2 1 FR47-like protein Acetyltransf_3 PF13302.7 ORF52122 - 0.00011 22.9 0.0 0.00043 21.0 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain RPS31 PF17067.5 ORF52122 - 0.039 14.1 0.2 0.17 12.1 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein S31e Transferase PF02458.15 ORF493 - 0.0033 16.1 0.0 0.13 10.8 0.0 2.2 2 0 0 2 2 2 2 Transferase family Condensation PF00668.20 ORF493 - 0.24 10.0 0.2 0.38 9.4 0.2 1.2 1 0 0 1 1 1 0 Condensation domain Syntaxin-18_N PF10496.9 ORF49195 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus EzrA PF06160.12 ORF46320 - 0.0001 20.6 11.0 0.00016 20.0 11.0 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA Gp-FAR-1 PF05823.12 ORF46320 - 0.00043 20.7 7.1 0.00072 19.9 7.1 1.3 1 0 0 1 1 1 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Bap31_Bap29_C PF18035.1 ORF46320 - 0.00084 19.3 1.8 0.0018 18.3 1.6 1.7 1 1 0 1 1 1 1 Bap31/Bap29 cytoplasmic coiled-coil domain DUF4201 PF13870.6 ORF46320 - 0.0057 16.4 9.0 0.012 15.4 9.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) Atg14 PF10186.9 ORF46320 - 0.007 15.5 7.2 0.0092 15.1 7.2 1.3 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 HAUS-augmin3 PF14932.6 ORF46320 - 0.0078 15.8 8.3 0.014 15.0 8.3 1.3 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 DUF948 PF06103.11 ORF46320 - 0.012 15.9 2.7 0.028 14.7 2.7 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) IFT57 PF10498.9 ORF46320 - 0.019 13.9 12.2 0.033 13.2 12.2 1.3 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 FapA PF03961.13 ORF46320 - 0.028 13.0 8.6 0.037 12.6 8.6 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4407 PF14362.6 ORF46320 - 0.028 13.8 2.8 0.042 13.2 2.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF713 PF05218.14 ORF46320 - 0.039 13.7 5.4 0.07 12.9 5.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF713) EcoEI_R_C PF08463.10 ORF46320 - 0.065 13.3 1.2 0.097 12.8 1.2 1.2 1 0 0 1 1 1 0 EcoEI R protein C-terminal RasGAP_C PF03836.15 ORF46320 - 0.16 12.1 11.6 0.55 10.4 11.6 1.9 1 1 0 1 1 1 0 RasGAP C-terminus Golgin_A5 PF09787.9 ORF46320 - 0.18 11.2 9.2 0.37 10.2 9.2 1.5 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF2730 PF10805.8 ORF46320 - 0.21 11.7 2.3 0.4 10.8 2.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) Exonuc_VII_L PF02601.15 ORF46320 - 0.3 10.6 9.3 0.49 9.9 9.3 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit OmpH PF03938.14 ORF46320 - 0.39 11.1 9.5 0.96 9.8 9.5 1.6 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) HAUS6_N PF14661.6 ORF46320 - 0.42 10.1 5.4 0.7 9.4 5.4 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Spc7 PF08317.11 ORF46320 - 0.44 9.4 13.3 0.95 8.3 13.4 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein Spectrin PF00435.21 ORF46320 - 0.46 11.0 7.9 0.15 12.6 4.0 2.1 2 1 0 2 2 2 0 Spectrin repeat SlyX PF04102.12 ORF46320 - 0.55 10.9 2.9 12 6.6 2.9 2.7 1 1 1 2 2 2 0 SlyX Syntaxin-6_N PF09177.11 ORF46320 - 0.73 10.4 5.5 2.1 8.9 5.5 1.9 1 0 0 1 1 1 0 Syntaxin 6, N-terminal TMPIT PF07851.13 ORF46320 - 2 7.6 10.3 2.3 7.4 9.0 1.6 1 1 1 2 2 2 0 TMPIT-like protein DUF2203 PF09969.9 ORF46320 - 2.1 9.1 4.0 1.4 9.7 1.0 2.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF1664 PF07889.12 ORF46320 - 2.5 8.2 7.6 2.4 8.2 2.6 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Sec34 PF04136.15 ORF46320 - 3 7.7 12.0 1.8 8.5 6.5 2.5 2 1 0 2 2 2 0 Sec34-like family DUF724 PF05266.14 ORF46320 - 3.1 7.6 9.2 2.5 7.9 7.7 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF724) DUF745 PF05335.13 ORF46320 - 3.1 7.5 8.8 3.6 7.3 6.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF745) DUF848 PF05852.11 ORF46320 - 3.3 7.8 6.3 8 6.6 6.2 1.7 1 1 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Prominin PF05478.11 ORF46320 - 4.6 5.1 13.5 7 4.5 13.5 1.2 1 0 0 1 1 1 0 Prominin Fib_alpha PF08702.10 ORF46320 - 4.8 7.4 23.1 2.9 8.1 12.6 2.6 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF3450 PF11932.8 ORF46320 - 5 6.4 10.8 20 4.4 10.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Laminin_II PF06009.12 ORF46320 - 6.7 6.7 16.1 1.3 9.0 11.4 2.0 2 0 0 2 2 2 0 Laminin Domain II BLOC1_2 PF10046.9 ORF46320 - 7.1 7.0 17.0 0.85 10.0 10.9 2.6 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_TATA_bd PF12325.8 ORF46320 - 7.5 6.8 15.6 2.9 8.1 10.5 2.6 2 1 0 2 2 2 0 TATA element modulatory factor 1 TATA binding Jnk-SapK_ap_N PF09744.9 ORF46320 - 7.7 6.7 14.7 1.2 9.3 8.8 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 PhaP_Bmeg PF09602.10 ORF46320 - 9.5 6.1 15.8 3 7.8 3.8 2.6 2 1 1 3 3 2 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) Transglut_core2 PF13369.6 ORF46082 - 3.1e-34 117.8 0.0 4.8e-34 117.2 0.0 1.3 1 0 0 1 1 1 1 Transglutaminase-like superfamily Transglut_core PF01841.19 ORF46082 - 0.055 13.9 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 Transglutaminase-like superfamily Epimerase PF01370.21 ORF46018 - 1.8e-24 86.6 0.0 2.8e-24 85.9 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF46018 - 5.4e-22 78.1 0.0 7.4e-22 77.6 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 ORF46018 - 5e-16 59.1 0.0 7e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF46018 - 1.2e-11 44.6 0.0 2e-11 43.9 0.0 1.4 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase NmrA PF05368.13 ORF46018 - 9.1e-10 38.5 0.0 1.7e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family NAD_binding_4 PF07993.12 ORF46018 - 3.1e-08 33.1 0.0 8.6e-08 31.7 0.0 1.7 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF46018 - 2.3e-07 30.2 0.0 4.4e-07 29.3 0.0 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF46018 - 9.1e-06 25.7 0.0 6.3e-05 23.0 0.0 2.0 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF46018 - 0.02 15.2 0.0 0.061 13.6 0.0 1.9 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain MMR_HSR1 PF01926.23 ORF40995 - 2.3e-20 72.8 0.0 8.7e-20 70.9 0.0 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase YchF-GTPase_C PF06071.13 ORF40995 - 1.4e-17 63.6 0.1 3.9e-17 62.2 0.1 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF933) FeoB_N PF02421.18 ORF40995 - 5.7e-06 25.9 0.0 1.6e-05 24.5 0.0 1.7 1 0 0 1 1 1 1 Ferrous iron transport protein B AAA_18 PF13238.6 ORF40995 - 0.015 15.9 0.2 3.6 8.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain SpoVT_C PF15714.5 ORF40995 - 0.092 12.8 0.3 0.18 11.8 0.1 1.6 2 0 0 2 2 2 0 Stage V sporulation protein T C-terminal, transcription factor Dynamin_N PF00350.23 ORF40995 - 0.12 12.4 0.9 3 7.9 0.0 2.8 1 1 1 3 3 3 0 Dynamin family Mga PF05043.13 ORF4030 - 0.0013 19.3 3.0 0.05 14.2 0.2 2.9 2 1 0 2 2 2 1 Mga helix-turn-helix domain DUF812 PF05667.11 ORF4030 - 0.004 16.1 24.3 0.004 16.1 24.3 2.9 1 1 2 3 3 2 2 Protein of unknown function (DUF812) DivIC PF04977.15 ORF4030 - 0.0047 16.7 2.4 0.0047 16.7 2.4 6.6 4 3 3 7 7 6 2 Septum formation initiator TMF_DNA_bd PF12329.8 ORF4030 - 0.0068 16.4 4.1 0.0068 16.4 4.1 6.7 3 3 4 7 7 5 1 TATA element modulatory factor 1 DNA binding HAP1_N PF04849.13 ORF4030 - 0.0073 15.5 11.1 0.0073 15.5 11.1 3.7 2 1 2 4 4 4 2 HAP1 N-terminal conserved region OmpH PF03938.14 ORF4030 - 0.018 15.4 10.2 0.018 15.4 10.2 3.9 2 2 1 3 3 3 0 Outer membrane protein (OmpH-like) Trans_reg_C PF00486.28 ORF4030 - 0.057 13.5 0.0 0.42 10.7 0.0 2.4 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal HTH_53 PF18606.1 ORF4030 - 0.17 11.6 0.0 18 5.1 0.0 2.7 2 0 0 2 2 2 0 Zap helix turn helix N-terminal domain TolA_bind_tri PF16331.5 ORF4030 - 0.23 11.5 27.8 7.9 6.6 2.3 6.4 2 1 4 6 6 6 0 TolA binding protein trimerisation Syntaxin-6_N PF09177.11 ORF4030 - 0.65 10.6 26.9 0.14 12.7 3.9 4.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal PhageMin_Tail PF10145.9 ORF4030 - 0.85 9.4 9.7 18 5.1 5.7 3.1 2 1 0 2 2 2 0 Phage-related minor tail protein UPF0242 PF06785.11 ORF4030 - 0.97 9.5 62.3 0.15 12.1 19.6 3.4 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus DASH_Hsk3 PF08227.11 ORF4030 - 1.1 9.7 17.0 0.6 10.5 0.7 5.0 5 0 0 5 5 5 0 DASH complex subunit Hsk3 like NPV_P10 PF05531.12 ORF4030 - 1.1 9.8 26.2 4.8 7.7 5.0 5.1 1 1 3 4 4 4 0 Nucleopolyhedrovirus P10 protein GAS PF13851.6 ORF4030 - 1.7 7.9 66.2 0.21 10.9 22.8 3.9 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding Sec34 PF04136.15 ORF4030 - 3.2 7.6 26.2 1 9.2 1.1 3.7 3 0 0 3 3 3 0 Sec34-like family Taxilin PF09728.9 ORF4030 - 3.5 6.7 63.3 2.8e+02 0.5 63.4 3.0 1 1 0 1 1 1 0 Myosin-like coiled-coil protein Syntaxin-18_N PF10496.9 ORF40269 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus FUSC PF04632.12 ORF38660 - 3e-25 88.9 9.8 3e-25 88.9 9.8 2.1 1 1 1 2 2 2 2 Fusaric acid resistance protein family FUSC_2 PF13515.6 ORF38660 - 2.9e-09 37.1 11.4 5.5e-09 36.2 10.9 1.7 1 1 1 2 2 2 2 Fusaric acid resistance protein-like ALMT PF11744.8 ORF38660 - 0.0068 15.3 3.5 0.0095 14.8 3.5 1.2 1 0 0 1 1 1 1 Aluminium activated malate transporter ArAE_1 PF06081.11 ORF38660 - 2.3 8.4 6.5 7.5 6.7 6.5 1.9 1 1 0 1 1 1 0 Aromatic acid exporter family member 1 DUF4371 PF14291.6 ORF38579 - 0.47 10.1 5.8 2.2 7.9 5.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4371) NLRC4_HD PF17889.1 ORF38579 - 1.3 9.4 6.8 0.91 9.9 0.7 3.1 3 0 0 3 3 3 0 NLRC4 helical domain DUF1811 PF08838.10 ORF38579 - 6.6 7.0 7.8 4.8 7.5 1.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1811) FAM176 PF14851.6 ORF38390 - 0.012 15.3 0.0 0.022 14.4 0.0 1.3 1 0 0 1 1 1 0 FAM176 family TMEM154 PF15102.6 ORF38390 - 0.015 15.2 0.0 0.015 15.2 0.0 2.4 2 1 0 2 2 2 0 TMEM154 protein family He_PIG PF05345.12 ORF38390 - 4.2 7.6 12.1 0.096 12.9 2.3 3.3 1 1 1 2 2 2 0 Putative Ig domain Mga PF05043.13 ORF35930 - 0.0013 19.3 3.0 0.05 14.2 0.2 2.9 2 1 0 2 2 2 1 Mga helix-turn-helix domain DUF812 PF05667.11 ORF35930 - 0.004 16.1 24.3 0.004 16.1 24.3 2.9 1 1 2 3 3 2 2 Protein of unknown function (DUF812) DivIC PF04977.15 ORF35930 - 0.0047 16.7 2.4 0.0047 16.7 2.4 6.6 4 3 3 7 7 6 2 Septum formation initiator TMF_DNA_bd PF12329.8 ORF35930 - 0.0068 16.4 4.1 0.0068 16.4 4.1 6.7 3 3 4 7 7 5 1 TATA element modulatory factor 1 DNA binding HAP1_N PF04849.13 ORF35930 - 0.0073 15.5 11.1 0.0073 15.5 11.1 3.7 2 1 2 4 4 4 2 HAP1 N-terminal conserved region OmpH PF03938.14 ORF35930 - 0.018 15.4 10.2 0.018 15.4 10.2 3.9 2 2 1 3 3 3 0 Outer membrane protein (OmpH-like) Trans_reg_C PF00486.28 ORF35930 - 0.057 13.5 0.0 0.42 10.7 0.0 2.4 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal HTH_53 PF18606.1 ORF35930 - 0.17 11.6 0.0 18 5.1 0.0 2.7 2 0 0 2 2 2 0 Zap helix turn helix N-terminal domain TolA_bind_tri PF16331.5 ORF35930 - 0.23 11.5 27.8 7.9 6.6 2.3 6.4 2 1 4 6 6 6 0 TolA binding protein trimerisation Syntaxin-6_N PF09177.11 ORF35930 - 0.65 10.6 26.9 0.14 12.7 3.9 4.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal PhageMin_Tail PF10145.9 ORF35930 - 0.85 9.4 9.7 18 5.1 5.7 3.1 2 1 0 2 2 2 0 Phage-related minor tail protein UPF0242 PF06785.11 ORF35930 - 0.97 9.5 62.3 0.15 12.1 19.6 3.4 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus DASH_Hsk3 PF08227.11 ORF35930 - 1.1 9.7 17.0 0.6 10.5 0.7 5.0 5 0 0 5 5 5 0 DASH complex subunit Hsk3 like NPV_P10 PF05531.12 ORF35930 - 1.1 9.8 26.2 4.8 7.7 5.0 5.1 1 1 3 4 4 4 0 Nucleopolyhedrovirus P10 protein GAS PF13851.6 ORF35930 - 1.7 7.9 66.2 0.21 10.9 22.8 3.9 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding Sec34 PF04136.15 ORF35930 - 3.2 7.6 26.2 1 9.2 1.1 3.7 3 0 0 3 3 3 0 Sec34-like family Taxilin PF09728.9 ORF35930 - 3.5 6.7 63.3 2.8e+02 0.5 63.4 3.0 1 1 0 1 1 1 0 Myosin-like coiled-coil protein Syntaxin-18_N PF10496.9 ORF35246 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus TetR_C_33 PF13305.6 ORF26798 - 0.094 13.5 2.2 0.12 13.1 0.3 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain HIM1 PF08732.10 ORF26008 - 0.007 15.9 0.2 0.012 15.1 0.2 1.3 1 0 0 1 1 1 1 HIM1 PET122 PF05476.11 ORF26008 - 0.13 11.6 0.2 0.18 11.1 0.2 1.1 1 0 0 1 1 1 0 PET122 RPN2_C PF18004.1 ORF26008 - 4.3 7.2 14.1 1 9.2 5.6 2.3 2 0 0 2 2 2 0 26S proteasome regulatory subunit RPN2 C-terminal domain adh_short PF00106.25 ORF23548 - 7.5e-25 87.5 1.3 1.7e-20 73.3 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF23548 - 3.2e-15 56.3 0.2 1.8e-14 53.9 0.0 1.9 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF23548 - 0.00024 21.0 0.4 0.00043 20.2 0.1 1.5 2 0 0 2 2 2 1 KR domain 3HCDH_N PF02737.18 ORF23548 - 0.071 13.0 0.4 0.12 12.2 0.4 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Peptidase_S24 PF00717.23 ORF2139 - 1.4e-12 47.3 0.1 4.3e-12 45.8 0.1 1.9 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 ORF2139 - 4.8e-12 45.8 0.0 8.1e-12 45.1 0.0 1.3 1 0 0 1 1 1 1 Signal peptidase, peptidase S26 Nif11 PF07862.11 ORF2139 - 0.1 12.9 0.0 0.2 12.0 0.0 1.5 1 0 0 1 1 1 0 Nif11 domain RRM_2 PF04059.12 ORF112552 - 0.073 13.3 0.8 0.42 10.9 0.1 2.2 2 1 0 2 2 2 0 RNA recognition motif 2 RuBisCO_small PF00101.20 ORF112512 - 0.042 13.8 0.2 0.11 12.5 0.2 1.7 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain AMP-binding PF00501.28 ORF109745 - 4.9e-27 94.6 0.0 8e-27 93.9 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme Syntaxin-18_N PF10496.9 ORF104196 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus hnRNP_Q_AcD PF18360.1 ORF103328 - 0.00025 20.9 0.0 2.9 7.9 0.0 4.0 4 0 0 4 4 4 2 Heterogeneous nuclear ribonucleoprotein Q acidic domain MgtE_N PF03448.17 ORF103328 - 0.0014 19.2 0.4 3.1 8.5 0.0 3.3 3 0 0 3 3 3 1 MgtE intracellular N domain UBM PF14377.6 ORF103328 - 0.004 16.5 3.1 0.6 9.6 0.1 2.7 2 0 0 2 2 2 2 Ubiquitin binding region PGI PF00342.19 ORF102832 - 1.5e-123 413.0 0.0 1.6e-123 412.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase DUF4938 PF16292.5 ORF102832 - 0.0057 16.0 0.0 0.0081 15.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4938) TPR_12 PF13424.6 ORF102021 - 0.0015 18.8 9.7 0.005 17.1 1.8 3.8 4 1 1 5 5 5 2 Tetratricopeptide repeat HGD-D PF06050.13 ORF102021 - 0.023 14.4 0.8 0.073 12.8 0.2 1.7 1 1 0 2 2 2 0 2-hydroxyglutaryl-CoA dehydratase, D-component TPR_1 PF00515.28 ORF102021 - 0.11 12.4 0.7 1.3 8.9 0.9 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF102021 - 0.13 12.6 7.0 1 9.7 1.4 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat PEP-utilisers_N PF05524.13 ORF102021 - 0.55 10.4 4.9 0.35 11.1 1.1 2.4 2 1 0 2 2 2 0 PEP-utilising enzyme, N-terminal TPR_2 PF07719.17 ORF102021 - 7.8 6.9 15.8 0.43 10.8 3.0 4.6 6 0 0 6 6 6 0 Tetratricopeptide repeat zf_CCCH_4 PF18345.1 NODE_18520_length_1028_cov_177.572004_g14118_i0reverse_frame_1 - 7.1e-06 25.9 20.1 0.00042 20.3 0.3 3.4 3 0 0 3 3 3 3 Zinc finger domain zf-CCCH PF00642.24 NODE_18520_length_1028_cov_177.572004_g14118_i0reverse_frame_1 - 1e-05 25.3 12.1 0.037 13.9 0.2 3.3 3 0 0 3 3 3 3 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_18520_length_1028_cov_177.572004_g14118_i0reverse_frame_1 - 2.5e-05 23.9 15.0 0.0064 16.3 0.2 3.3 3 0 0 3 3 3 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 NODE_18520_length_1028_cov_177.572004_g14118_i0reverse_frame_1 - 0.00014 22.1 2.3 0.0003 21.0 2.3 1.6 1 0 0 1 1 1 1 Zinc-finger containing family Torus PF16131.5 NODE_18520_length_1028_cov_177.572004_g14118_i0reverse_frame_1 - 0.0055 17.4 8.2 0.025 15.3 0.5 3.3 1 1 2 3 3 3 1 Torus domain HTH_24 PF13412.6 NODE_18392_length_1032_cov_58.590772_g14018_i0forward_frame_2 - 0.064 12.8 0.6 1.2 8.7 0.2 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding DUF468 PF04318.12 NODE_18389_length_1032_cov_83.282849_g14016_i0forward_frame_3 - 3.7 8.3 6.9 4 8.2 0.3 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF468) Kinesin PF00225.23 NODE_18376_length_1032_cov_203.624875_g14004_i0forward_frame_2 - 8.6e-17 61.1 0.0 1.4e-16 60.4 0.0 1.3 1 0 0 1 1 1 1 Kinesin motor domain Remorin_C PF03763.13 NODE_18376_length_1032_cov_203.624875_g14004_i0forward_frame_2 - 0.037 13.9 4.1 0.045 13.6 2.6 1.9 2 0 0 2 2 2 0 Remorin, C-terminal region TEX13 PF15186.6 NODE_18376_length_1032_cov_203.624875_g14004_i0forward_frame_2 - 0.29 10.8 3.9 0.11 12.1 1.2 1.7 2 0 0 2 2 2 0 Testis-expressed sequence 13 protein family ABC_tran PF00005.27 ORF97349 - 3.8e-37 127.9 0.0 6.1e-37 127.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter NIL PF09383.10 ORF97349 - 1.6e-20 72.7 0.0 3.1e-20 71.8 0.0 1.5 1 0 0 1 1 1 1 NIL domain AAA_21 PF13304.6 ORF97349 - 1.6e-09 38.0 0.5 9.9e-05 22.3 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF97349 - 2.9e-06 26.9 0.1 1.6e-05 24.4 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF97349 - 1.4e-05 25.4 0.4 9.4e-05 22.7 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF97349 - 0.00057 20.3 0.3 0.002 18.6 0.3 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 ORF97349 - 0.0055 16.4 0.0 0.012 15.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 ORF97349 - 0.0077 15.8 0.1 2.9 7.4 0.0 2.8 3 0 0 3 3 3 1 AAA domain RsgA_GTPase PF03193.16 ORF97349 - 0.012 15.6 0.1 0.021 14.7 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase SbcCD_C PF13558.6 ORF97349 - 0.021 15.0 0.2 0.2 11.9 0.2 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TniB PF05621.11 ORF97349 - 0.034 13.5 0.0 0.66 9.4 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein ABC_ATPase PF09818.9 ORF97349 - 0.075 11.8 0.0 4 6.1 0.0 2.3 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.6 ORF97349 - 0.096 12.8 0.1 0.26 11.5 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF97349 - 0.14 12.6 0.1 0.27 11.7 0.1 1.5 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF97349 - 0.15 12.2 0.0 0.45 10.6 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks39.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks39.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks39.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks39.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AAA_12 PF13087.6 ORF44276 - 4.3e-57 193.0 0.3 1.2e-56 191.5 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_11 PF13086.6 ORF44276 - 1.1e-27 97.5 1.4 5.3e-20 72.3 0.3 4.3 3 1 1 4 4 4 2 AAA domain AAA_19 PF13245.6 ORF44276 - 1.1e-07 32.3 1.7 3e-06 27.6 0.0 2.9 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF44276 - 1.3e-07 31.6 0.0 1.3e-07 31.6 0.0 3.1 3 0 0 3 3 3 1 AAA domain WW PF00397.26 ORF44276 - 3.8e-07 30.1 2.4 6.1e-07 29.4 0.9 2.1 2 0 0 2 2 2 1 WW domain UvrD_C_2 PF13538.6 ORF44276 - 0.00014 21.6 0.3 0.0003 20.6 0.3 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 ORF44276 - 0.00044 20.0 0.8 0.26 11.0 0.0 3.5 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase AAA PF00004.29 ORF44276 - 0.0062 17.0 0.9 0.02 15.3 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF44276 - 0.0071 16.6 3.8 0.24 11.7 0.0 3.5 4 0 0 4 4 4 1 AAA domain Nrap_D6 PF17407.2 ORF44276 - 0.042 14.0 0.2 0.084 13.1 0.2 1.5 1 0 0 1 1 1 0 Nrap protein domain 6 AAA_25 PF13481.6 ORF44276 - 0.081 12.5 0.0 0.27 10.8 0.0 1.9 1 0 0 1 1 1 0 AAA domain TFIID-18kDa PF02269.16 ORF44276 - 0.14 12.2 0.3 0.5 10.4 0.3 1.9 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit CHASE4 PF05228.13 ORF44276 - 0.15 12.3 1.4 4 7.6 1.6 2.5 2 0 0 2 2 2 0 CHASE4 domain DUF2075 PF09848.9 ORF44276 - 0.28 10.4 0.0 0.28 10.4 0.0 3.5 4 0 0 4 4 4 0 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 ORF44276 - 0.57 10.5 0.0 0.57 10.5 0.0 2.8 3 1 0 3 3 3 0 AAA ATPase domain ATPase PF06745.13 ORF44276 - 0.59 9.4 0.0 0.59 9.4 0.0 2.3 3 0 0 3 3 3 0 KaiC DUF87 PF01935.17 ORF44276 - 0.84 9.7 8.3 4 7.5 1.3 3.0 3 0 0 3 3 3 0 Helicase HerA, central domain VIT PF08487.10 ORF78447 - 4.4e-16 59.1 0.0 8.6e-16 58.1 0.0 1.5 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain PPC PF04151.15 ORF78447 - 0.086 14.0 0.1 0.63 11.2 0.0 2.5 2 0 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain AAA_9 PF12781.7 ORF98008 - 9.4e-43 145.9 1.7 2.3e-42 144.6 1.1 1.9 2 0 0 2 2 2 1 ATP-binding dynein motor region AAA_lid_11 PF18198.1 ORF98008 - 1.7e-39 135.3 0.3 4.4e-39 133.9 0.0 1.8 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF98008 - 8e-35 119.5 0.0 3.1e-33 114.4 0.0 2.8 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF98008 - 1e-32 113.6 0.0 1.9e-32 112.8 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MAT1 PF06391.13 ORF98008 - 0.0012 18.7 3.8 0.002 18.0 3.8 1.3 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 GAS2 PF02187.17 ORF67485 - 3.7e-07 30.1 0.0 1e-06 28.7 0.0 1.7 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain SlyX PF04102.12 ORF67485 - 3.6 8.3 21.3 7.3 7.3 0.8 6.1 4 1 2 6 6 6 0 SlyX FlaC_arch PF05377.11 ORF67485 - 7.4 7.1 19.8 5.3 7.5 2.2 6.4 6 0 0 6 6 6 0 Flagella accessory protein C (FlaC) GAS2 PF02187.17 ORF107254 - 3.7e-07 30.1 0.0 1e-06 28.7 0.0 1.7 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain SlyX PF04102.12 ORF107254 - 3.6 8.3 21.3 7.3 7.3 0.8 6.1 4 1 2 6 6 6 0 SlyX FlaC_arch PF05377.11 ORF107254 - 7.4 7.1 19.8 5.3 7.5 2.2 6.4 6 0 0 6 6 6 0 Flagella accessory protein C (FlaC) CTD PF12815.7 ORF53585 - 4.5e-05 23.9 10.2 0.028 15.0 10.2 3.1 1 1 0 1 1 1 1 Spt5 C-terminal nonapeptide repeat binding Spt4 Clathrin PF00637.20 ORF111419 - 8.6e-07 28.9 7.5 0.09 12.7 0.1 4.3 2 1 2 4 4 4 3 Region in Clathrin and VPS Coatomer_WDAD PF04053.14 ORF111419 - 0.00011 21.4 9.3 0.00084 18.5 0.2 3.6 4 0 0 4 4 4 2 Coatomer WD associated region TPR_7 PF13176.6 ORF111419 - 0.019 15.0 1.6 2.9 8.1 0.0 4.6 4 2 0 4 4 4 0 Tetratricopeptide repeat SNAP PF14938.6 ORF111419 - 0.056 12.9 4.3 1.6 8.1 0.2 2.6 1 1 1 2 2 2 0 Soluble NSF attachment protein, SNAP WD40_like PF17005.5 ORF111419 - 0.062 12.6 1.8 0.34 10.2 0.1 2.4 1 1 1 2 2 2 0 WD40-like domain TPR_2 PF07719.17 ORF111419 - 0.084 13.0 17.3 7.8 6.9 1.4 5.7 6 1 1 7 7 7 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF111419 - 0.55 10.2 12.4 5.3 7.0 0.3 4.9 4 1 1 5 5 5 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF111419 - 0.55 10.5 9.9 10 6.5 0.2 4.4 3 1 2 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 ORF111419 - 0.86 9.3 2.8 77 3.1 0.1 3.6 3 0 0 3 3 3 0 TPR repeat MIT PF04212.18 ORF111419 - 1.7 8.8 8.7 0.19 11.8 0.3 3.7 4 1 1 5 5 5 0 MIT (microtubule interacting and transport) domain EMC1_C PF07774.13 ORF44177 - 8.7e-42 143.2 0.8 4.5e-41 140.9 0.8 2.1 1 1 0 1 1 1 1 ER membrane protein complex subunit 1, C-terminal PQQ_2 PF13360.6 ORF44177 - 0.0016 18.1 0.0 0.73 9.4 0.0 2.9 3 0 0 3 3 3 2 PQQ-like domain CNH PF00780.22 ORF44177 - 0.026 14.2 0.2 0.42 10.2 0.0 2.6 2 0 0 2 2 2 0 CNH domain HNH PF01844.23 ORF92846 - 1.4e-08 34.7 0.1 2.4e-08 34.0 0.1 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 ORF92846 - 0.0002 21.2 0.5 0.00038 20.3 0.5 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH PF01844.23 ORF57911 - 2.1e-08 34.2 0.0 3.6e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 ORF57911 - 7.7e-05 22.5 0.5 0.00015 21.6 0.5 1.4 1 0 0 1 1 1 1 HNH endonuclease tRNA-synt_1 PF00133.22 ORF24066 - 2.6e-235 782.3 0.0 3.1e-235 782.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF24066 - 2.2e-27 95.9 0.0 4.3e-27 94.9 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF24066 - 1.6e-19 69.9 0.1 2.1e-10 39.9 0.0 3.6 3 1 0 3 3 3 3 tRNA synthetases class I (M) zf-FPG_IleRS PF06827.14 ORF24066 - 1.7e-09 37.3 3.9 1.7e-09 37.3 3.9 2.6 3 0 0 3 3 3 1 Zinc finger found in FPG and IleRS tRNA-synt_1e PF01406.19 ORF24066 - 1.1e-08 34.7 0.0 3.1e-06 26.8 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 ORF24066 - 3.3e-07 30.0 0.0 6.1e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 ORF24066 - 3.2e-06 26.3 0.0 1.2e-05 24.4 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (K) PAPS_reduct PF01507.19 ORF24066 - 0.003 17.6 0.0 2.2 8.3 0.0 2.4 2 0 0 2 2 2 2 Phosphoadenosine phosphosulfate reductase family HNH PF01844.23 ORF71536 - 2.1e-08 34.2 0.0 3.5e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 ORF71536 - 7.7e-05 22.5 0.5 0.00015 21.6 0.5 1.4 1 0 0 1 1 1 1 HNH endonuclease RPN2_C PF18004.1 ORF63736 - 5.1e-39 133.8 9.3 8.7e-39 133.0 9.3 1.3 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN2 C-terminal domain PC_rep PF01851.22 ORF63736 - 1.8e-27 94.3 15.3 0.0032 17.8 0.0 7.8 7 0 0 7 7 7 7 Proteasome/cyclosome repeat HEAT_2 PF13646.6 ORF63736 - 2.7e-13 50.1 0.0 8.2e-12 45.4 0.0 2.9 2 0 0 2 2 2 1 HEAT repeats HEAT PF02985.22 ORF63736 - 0.00073 19.6 0.2 3.8 8.0 0.0 3.9 4 0 0 4 4 4 2 HEAT repeat DUF2812 PF11193.8 ORF63736 - 0.033 14.4 0.1 0.12 12.6 0.1 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2812) LpxD PF04613.14 ORF63736 - 0.07 12.9 0.0 0.18 11.6 0.0 1.7 1 0 0 1 1 1 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DUF1912 PF08930.10 ORF63736 - 0.24 11.6 1.2 12 6.1 0.3 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1912) DUF2344 PF10105.9 ORF63736 - 0.65 9.8 2.4 0.73 9.7 0.0 2.3 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2344) Spc7 PF08317.11 ORF55363 - 0.00018 20.5 21.7 0.00018 20.5 21.7 7.1 3 2 3 6 6 6 3 Spc7 kinetochore protein BRE1 PF08647.11 ORF48982 - 7.2e-09 35.6 17.5 7.2e-09 35.6 17.5 10.5 3 3 6 10 10 10 2 BRE1 E3 ubiquitin ligase CENP-F_leu_zip PF10473.9 ORF48982 - 0.012 15.6 13.5 0.012 15.6 13.5 9.8 1 1 7 9 9 9 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF99 PF01949.16 ORF48982 - 0.064 12.7 0.1 0.064 12.7 0.1 4.8 4 1 1 5 5 5 0 Protein of unknown function DUF99 ketoacyl-synt PF00109.26 ORF76454 - 5.2e-37 127.8 0.6 3.1e-36 125.2 0.7 2.0 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 ORF76454 - 2.7e-17 62.9 0.1 5.3e-17 61.9 0.1 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 ORF76454 - 0.0034 17.8 0.0 0.0092 16.4 0.0 1.7 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension Cbl_N PF02262.16 ORF39437 - 10 6.2 11.3 0.42 10.6 0.4 3.7 3 1 0 3 3 3 0 CBL proto-oncogene N-terminal domain 1 Adaptin_N PF01602.20 ORF39157 - 2.6e-65 221.0 9.1 3.7e-65 220.5 9.1 1.2 1 0 0 1 1 1 1 Adaptin N terminal region Coatomer_b_Cpla PF14806.6 ORF39157 - 7.7e-45 152.0 1.4 1.7e-44 150.9 0.4 2.2 2 1 0 2 2 2 1 Coatomer beta subunit appendage platform Coatamer_beta_C PF07718.12 ORF39157 - 3.9e-44 150.0 0.0 9.5e-44 148.7 0.0 1.7 1 0 0 1 1 1 1 Coatomer beta C-terminal region Cnd1 PF12717.7 ORF39157 - 0.00014 22.0 6.2 0.042 13.9 0.1 3.6 2 1 1 4 4 4 2 non-SMC mitotic condensation complex subunit 1 RTP1_C1 PF10363.9 ORF39157 - 0.012 15.8 0.3 0.31 11.3 0.0 3.0 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF4476 PF14771.6 ORF39157 - 0.022 15.1 0.4 0.13 12.6 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4476) fn3_5 PF06280.12 ORF39157 - 0.026 15.2 0.1 0.088 13.5 0.1 1.9 1 0 0 1 1 1 0 Fn3-like domain DUF5578 PF17741.1 ORF39157 - 0.038 13.4 2.4 0.27 10.6 0.4 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5578) C_Hendra PF16821.5 ORF39157 - 0.11 12.3 3.1 7.7 6.4 0.1 2.8 3 0 0 3 3 3 0 C protein from hendra and measles viruses PLD_C PF12357.8 ORF58238 - 0.081 12.8 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 Phospholipase D C terminal DUF3584 PF12128.8 ORF15856 - 0.00048 17.8 36.6 0.00048 17.8 36.6 3.4 1 1 2 3 3 3 2 Protein of unknown function (DUF3584) Fez1 PF06818.15 ORF15856 - 0.003 18.0 14.6 0.003 18.0 14.6 6.8 1 1 5 6 6 6 2 Fez1 Styelin PF17562.2 ORF15856 - 0.0063 16.8 2.8 0.017 15.5 1.1 2.7 2 0 0 2 2 2 1 Styelin Pkinase_Tyr PF07714.17 ORF109025 - 8e-13 48.3 0.0 1.6e-12 47.3 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF109025 - 2.6e-12 46.7 0.0 9.2e-12 44.9 0.0 1.9 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF109025 - 0.0019 18.2 0.2 0.0019 18.2 0.2 2.8 2 1 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF109025 - 0.033 13.5 0.1 0.068 12.5 0.1 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF109025 - 0.13 11.0 0.1 0.13 11.0 0.1 2.7 2 1 0 2 2 2 0 Fungal protein kinase Glyco_hydro_31 PF01055.26 ORF57188 - 7.4e-130 434.0 10.6 2.5e-84 284.0 3.1 2.6 3 0 0 3 3 3 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF57188 - 2.2e-06 27.9 0.0 7e-06 26.3 0.0 1.9 1 0 0 1 1 1 1 Galactose mutarotase-like NtCtMGAM_N PF16863.5 ORF57188 - 0.0011 19.2 3.2 0.0027 17.9 0.5 2.3 2 0 0 2 2 2 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase TRP_N PF14558.6 ORF57188 - 0.16 12.3 2.0 0.33 11.3 2.0 1.4 1 0 0 1 1 1 0 ML-like domain Glyco_hydro_31 PF01055.26 ORF23373 - 7.4e-130 434.0 10.6 2.5e-84 284.0 3.1 2.6 3 0 0 3 3 3 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF23373 - 2.2e-06 27.9 0.0 7e-06 26.3 0.0 1.9 1 0 0 1 1 1 1 Galactose mutarotase-like NtCtMGAM_N PF16863.5 ORF23373 - 0.0011 19.2 3.2 0.0027 17.9 0.5 2.3 2 0 0 2 2 2 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase TRP_N PF14558.6 ORF23373 - 0.16 12.3 2.0 0.33 11.3 2.0 1.4 1 0 0 1 1 1 0 ML-like domain ABC2_membrane_3 PF12698.7 ORF84540 - 2.3e-39 135.5 21.9 2.3e-39 135.5 21.9 1.7 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 ORF84540 - 6.1e-29 101.3 0.0 1.4e-28 100.1 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF84540 - 4.2e-10 39.9 1.9 9e-08 32.3 0.0 2.9 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF84540 - 0.0073 15.8 0.1 0.24 10.8 0.0 2.3 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain Cortex-I_coil PF09304.10 ORF84540 - 0.015 15.5 0.5 0.044 14.0 0.5 1.7 1 0 0 1 1 1 0 Cortexillin I, coiled coil ABC_membrane_3 PF13748.6 ORF84540 - 0.033 13.4 2.1 0.82 8.9 1.1 2.5 2 0 0 2 2 2 0 ABC transporter transmembrane region AAA_24 PF13479.6 ORF84540 - 0.079 12.7 0.1 5 6.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 ORF84540 - 0.14 11.8 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ABC2_membrane_3 PF12698.7 ORF39800 - 2.3e-39 135.5 21.9 2.3e-39 135.5 21.9 1.7 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 ORF39800 - 6.1e-29 101.3 0.0 1.4e-28 100.1 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF39800 - 4.2e-10 39.9 1.9 9e-08 32.3 0.0 2.9 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF39800 - 0.0073 15.8 0.1 0.24 10.8 0.0 2.3 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain Cortex-I_coil PF09304.10 ORF39800 - 0.015 15.5 0.5 0.044 14.0 0.5 1.7 1 0 0 1 1 1 0 Cortexillin I, coiled coil ABC_membrane_3 PF13748.6 ORF39800 - 0.033 13.4 2.1 0.82 8.9 1.1 2.5 2 0 0 2 2 2 0 ABC transporter transmembrane region AAA_24 PF13479.6 ORF39800 - 0.079 12.7 0.1 5 6.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 ORF39800 - 0.14 11.8 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain H_lectin PF09458.10 ORF105152 - 3.7e-07 30.2 4.2 0.00093 19.3 0.1 7.2 6 2 0 6 6 6 4 H-type lectin domain RIFIN PF02009.16 ORF105152 - 0.38 10.6 20.8 0.1 12.5 7.8 2.4 2 0 0 2 2 2 0 Rifin DUF3584 PF12128.8 ORF110584 - 0.00034 18.3 35.8 0.00034 18.3 35.8 3.4 1 1 2 3 3 3 2 Protein of unknown function (DUF3584) Fez1 PF06818.15 ORF110584 - 0.0043 17.5 15.3 0.0043 17.5 15.3 6.8 1 1 5 6 6 6 2 Fez1 Styelin PF17562.2 ORF110584 - 0.0047 17.3 2.4 0.014 15.7 0.9 2.7 2 0 0 2 2 2 1 Styelin PIP5K PF01504.18 ORF70095 - 2.1e-42 145.2 0.0 7.4e-41 140.2 0.0 2.3 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase DUF900 PF05990.12 ORF70095 - 1.8e-09 37.5 0.0 3e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_6 PF12697.7 ORF70095 - 0.00039 21.1 2.4 0.00056 20.6 1.2 1.9 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_8 PF06259.12 ORF70095 - 0.0034 17.0 0.0 0.0072 16.0 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase LIDHydrolase PF10230.9 ORF70095 - 0.02 14.5 0.0 0.042 13.4 0.0 1.5 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase DUF726 PF05277.12 ORF70095 - 0.025 13.5 0.0 0.04 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Ser_hydrolase PF06821.13 ORF70095 - 0.042 13.7 0.1 0.074 12.9 0.1 1.3 1 0 0 1 1 1 0 Serine hydrolase Lipase_3 PF01764.25 ORF70095 - 0.11 12.4 0.1 0.26 11.2 0.1 1.6 1 0 0 1 1 1 0 Lipase (class 3) GTP_EFTU PF00009.27 ORF569 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF569 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF569 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF569 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF569 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF569 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF569 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF569 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF569 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF569 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF569 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF569 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 GTP_EFTU PF00009.27 ORF55681 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF55681 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF55681 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF55681 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF55681 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF55681 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF55681 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF55681 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF55681 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF55681 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF55681 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF55681 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 GTP_EFTU PF00009.27 ORF44348 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF44348 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF44348 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF44348 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF44348 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF44348 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF44348 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF44348 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF44348 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF44348 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF44348 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF44348 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 GTP_EFTU PF00009.27 ORF33082 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF33082 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF33082 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF33082 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF33082 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF33082 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF33082 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF33082 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF33082 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF33082 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF33082 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF33082 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 GTP_EFTU PF00009.27 ORF31986 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF31986 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF31986 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF31986 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF31986 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF31986 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF31986 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF31986 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF31986 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF31986 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF31986 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF31986 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 CENP-Q PF13094.6 ORF521 - 0.0051 17.0 5.7 0.0051 17.0 5.7 9.5 2 1 7 9 9 9 1 CENP-Q, a CENPA-CAD centromere complex subunit CENP-Q PF13094.6 ORF38898 - 0.0051 17.0 5.7 0.0051 17.0 5.7 9.5 2 1 7 9 9 9 1 CENP-Q, a CENPA-CAD centromere complex subunit DNA_topoisoIV PF00521.20 ORF6861 - 3.7e-154 513.7 0.0 4.7e-154 513.4 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 ORF6861 - 6.7e-78 256.0 15.7 1.1e-14 53.6 0.1 6.6 7 0 0 7 7 7 6 DNA gyrase C-terminal domain, beta-propeller UBA_e1_thiolCys PF10585.9 ORF43182 - 1.3e-63 215.3 7.1 1.3e-63 215.3 7.1 1.7 2 0 0 2 2 2 1 Ubiquitin-activating enzyme active site ThiF PF00899.21 ORF43182 - 4.9e-58 196.4 0.0 8.4e-55 185.8 0.0 2.1 2 0 0 2 2 2 2 ThiF family E1_FCCH PF16190.5 ORF43182 - 2.6e-06 27.5 0.5 1.3e-05 25.3 0.5 2.3 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 FCCH domain E1_UFD PF09358.10 ORF43182 - 0.00028 21.5 0.3 0.0016 19.1 0.0 2.4 2 0 0 2 2 2 1 Ubiquitin fold domain E1_4HB PF16191.5 ORF43182 - 0.0033 17.6 0.1 0.015 15.5 0.0 2.1 2 0 0 2 2 2 1 Ubiquitin-activating enzyme E1 four-helix bundle CFIA_Pcf11 PF11526.8 ORF43182 - 0.49 10.9 4.3 20 5.8 2.1 2.9 3 0 0 3 3 3 0 Subunit of cleavage factor IA Pcf11 DnaJ PF00226.31 ORF19400 - 2.4e-13 50.0 0.1 5.8e-13 48.8 0.1 1.6 1 0 0 1 1 1 1 DnaJ domain PDZ_2 PF13180.6 ORF19400 - 0.00037 20.7 0.0 0.00089 19.5 0.0 1.6 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF19400 - 0.017 14.9 0.0 0.18 11.7 0.0 2.7 3 0 0 3 3 3 0 PDZ domain zf-MYND PF01753.18 ORF19400 - 0.021 14.9 8.2 0.05 13.7 8.2 1.6 1 0 0 1 1 1 0 MYND finger PDZ PF00595.24 ORF19400 - 0.16 12.3 0.0 0.38 11.1 0.0 1.6 1 0 0 1 1 1 0 PDZ domain Rieske_2 PF13806.6 ORF8805 - 3.9e-20 71.7 0.0 8.4e-20 70.7 0.0 1.6 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Pyr_redox_2 PF07992.14 ORF8805 - 9.8e-19 67.7 0.0 1.8e-18 66.8 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR PF01077.22 ORF8805 - 3.7e-16 59.0 0.0 6.4e-16 58.3 0.0 1.4 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Fer2_BFD PF04324.15 ORF8805 - 2.4e-10 40.6 11.3 5.4e-09 36.3 10.6 2.8 2 0 0 2 2 2 1 BFD-like [2Fe-2S] binding domain NIR_SIR_ferr PF03460.17 ORF8805 - 3.1e-07 30.1 0.0 6.4e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Rubredoxin_C PF18267.1 ORF8805 - 3.5e-06 26.8 0.0 1.6e-05 24.7 0.0 2.2 1 1 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain Pyr_redox PF00070.27 ORF8805 - 6.2e-06 26.7 0.0 1.6e-05 25.4 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rieske PF00355.26 ORF8805 - 0.02 14.8 0.0 0.047 13.6 0.0 1.7 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain FKBP26_C PF18046.1 ORF8805 - 0.031 14.4 0.0 0.07 13.2 0.0 1.5 1 0 0 1 1 1 0 FKBP26_C-terminal Rieske_2 PF13806.6 ORF80848 - 3.9e-20 71.7 0.0 8.4e-20 70.7 0.0 1.6 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Pyr_redox_2 PF07992.14 ORF80848 - 9.8e-19 67.7 0.0 1.8e-18 66.8 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR PF01077.22 ORF80848 - 3.7e-16 59.0 0.0 6.4e-16 58.3 0.0 1.4 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Fer2_BFD PF04324.15 ORF80848 - 2.4e-10 40.6 11.3 5.4e-09 36.3 10.6 2.8 2 0 0 2 2 2 1 BFD-like [2Fe-2S] binding domain NIR_SIR_ferr PF03460.17 ORF80848 - 3.1e-07 30.1 0.0 6.4e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Rubredoxin_C PF18267.1 ORF80848 - 3.5e-06 26.8 0.0 1.6e-05 24.7 0.0 2.2 1 1 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain Pyr_redox PF00070.27 ORF80848 - 6.2e-06 26.7 0.0 1.6e-05 25.4 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rieske PF00355.26 ORF80848 - 0.02 14.8 0.0 0.047 13.6 0.0 1.7 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain FKBP26_C PF18046.1 ORF80848 - 0.031 14.4 0.0 0.07 13.2 0.0 1.5 1 0 0 1 1 1 0 FKBP26_C-terminal Rieske_2 PF13806.6 ORF101386 - 3.9e-20 71.7 0.0 8.4e-20 70.7 0.0 1.6 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Pyr_redox_2 PF07992.14 ORF101386 - 9.8e-19 67.7 0.0 1.8e-18 66.8 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR PF01077.22 ORF101386 - 3.7e-16 59.0 0.0 6.4e-16 58.3 0.0 1.4 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Fer2_BFD PF04324.15 ORF101386 - 2.4e-10 40.6 11.3 5.4e-09 36.3 10.6 2.8 2 0 0 2 2 2 1 BFD-like [2Fe-2S] binding domain NIR_SIR_ferr PF03460.17 ORF101386 - 3.1e-07 30.1 0.0 6.4e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Rubredoxin_C PF18267.1 ORF101386 - 3.5e-06 26.8 0.0 1.6e-05 24.7 0.0 2.2 1 1 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain Pyr_redox PF00070.27 ORF101386 - 6.2e-06 26.7 0.0 1.6e-05 25.4 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rieske PF00355.26 ORF101386 - 0.02 14.8 0.0 0.047 13.6 0.0 1.7 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain FKBP26_C PF18046.1 ORF101386 - 0.031 14.4 0.0 0.07 13.2 0.0 1.5 1 0 0 1 1 1 0 FKBP26_C-terminal VIT PF08487.10 ORF48355 - 1.4e-24 86.4 4.9 2.1e-24 85.8 0.1 3.4 4 0 0 4 4 4 1 Vault protein inter-alpha-trypsin domain VWA_3 PF13768.6 ORF48355 - 2.8e-24 85.8 0.0 4.8e-24 85.1 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF48355 - 2.7e-11 44.0 0.0 8.2e-11 42.5 0.0 1.9 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT_2 PF13757.6 ORF48355 - 1.6e-09 37.5 0.0 3.8e-09 36.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF48355 - 2.6e-09 37.5 0.1 6e-09 36.4 0.1 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 ORF21977 - 2e-27 96.1 0.0 3.4e-27 95.3 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF21977 - 2.7e-25 88.7 5.0 5.7e-25 87.7 0.0 3.5 4 0 0 4 4 4 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF21977 - 5.9e-15 56.0 0.4 1.3e-14 54.9 0.4 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF21977 - 7.7e-14 52.2 0.0 2.3e-13 50.7 0.0 1.9 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT_2 PF13757.6 ORF21977 - 9.6e-09 35.0 0.0 2.3e-08 33.8 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain A2M PF00207.22 ORF53921 - 6.3e-16 58.0 0.0 1.5e-15 56.8 0.0 1.6 1 0 0 1 1 1 1 Alpha-2-macroglobulin family A2M_BRD PF07703.14 ORF53921 - 4.6e-10 40.0 0.1 8.8e-10 39.1 0.1 1.5 1 0 0 1 1 1 1 Alpha-2-macroglobulin bait region domain bMG10 PF17973.1 ORF53921 - 3.8e-07 30.3 0.0 1.9e-06 28.1 0.0 2.2 2 0 0 2 2 2 1 Bacterial Alpha-2-macroglobulin MG10 domain Actin PF00022.19 ORF53921 - 0.14 10.7 0.0 0.23 10.0 0.0 1.2 1 0 0 1 1 1 0 Actin tRNA-synt_1c PF00749.21 ORF39383 - 2.7e-90 302.4 0.3 5.1e-90 301.6 0.3 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 ORF39383 - 1.2e-30 106.6 0.4 2.8e-30 105.5 0.4 1.7 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain GST_C PF00043.25 ORF39383 - 4e-07 30.2 0.0 1.4e-06 28.4 0.0 2.0 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF39383 - 0.00021 21.3 0.0 0.00051 20.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF39383 - 0.013 15.7 0.0 0.078 13.2 0.0 2.3 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain DUF1281_C PF18406.1 ORF39383 - 0.051 13.3 0.0 0.15 11.8 0.0 1.7 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein Kinesin PF00225.23 ORF58039 - 1.4e-49 168.8 2.1 1.4e-49 168.8 2.1 4.6 2 1 2 4 4 4 1 Kinesin motor domain BRE1 PF08647.11 ORF58039 - 0.0044 17.1 15.4 0.0044 17.1 15.4 8.8 2 1 6 8 8 8 2 BRE1 E3 ubiquitin ligase MbeD_MobD PF04899.12 ORF58039 - 0.21 11.7 0.1 0.21 11.7 0.1 5.6 5 1 1 6 6 6 0 MbeD/MobD like ABC_tran PF00005.27 ORF69410 - 2.1e-30 106.0 0.0 4.7e-30 104.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF69410 - 1.2e-12 48.1 0.1 3.6e-12 46.5 0.1 1.7 1 1 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF69410 - 2e-06 27.4 0.4 0.0015 18.0 0.1 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF69410 - 0.00052 19.7 0.1 0.0018 18.0 0.1 1.9 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF69410 - 0.00081 19.3 0.0 0.0014 18.6 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 ORF69410 - 0.0015 18.8 0.2 0.012 15.9 0.1 2.4 2 1 0 2 2 1 1 AAA domain AAA_16 PF13191.6 ORF69410 - 0.0015 18.9 0.2 0.0052 17.2 0.2 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 ORF69410 - 0.0052 17.0 0.1 1.3 9.2 0.0 2.7 1 1 0 2 2 2 1 AAA domain AAA PF00004.29 ORF69410 - 0.0056 17.1 0.0 0.019 15.4 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF69410 - 0.045 13.5 0.1 1 9.0 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_25 PF13481.6 ORF69410 - 0.045 13.3 0.2 0.15 11.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain ZZ PF00569.17 ORF69410 - 0.073 12.9 5.4 0.14 11.9 5.4 1.5 1 0 0 1 1 1 0 Zinc finger, ZZ type AAA_33 PF13671.6 ORF69410 - 0.097 12.8 0.0 0.24 11.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain AI-2E_transport PF01594.16 ORF69410 - 0.1 11.7 0.1 0.17 11.0 0.1 1.3 1 0 0 1 1 1 0 AI-2E family transporter AAA_5 PF07728.14 ORF69410 - 0.13 12.3 0.0 4.4 7.3 0.0 2.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF69410 - 0.17 12.4 0.0 0.43 11.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain LRR_6 PF13516.6 ORF86905 - 5.8e-21 72.7 33.3 0.12 12.4 0.1 12.5 13 0 0 13 13 13 10 Leucine Rich repeat LRR_4 PF12799.7 ORF86905 - 4.4e-05 23.8 24.7 0.2 12.1 0.2 7.8 7 1 1 8 8 8 4 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF86905 - 5.1e-05 23.3 17.6 44 5.2 0.0 10.9 13 0 0 13 13 13 1 Leucine Rich Repeat LRR_8 PF13855.6 ORF86905 - 3 7.7 26.2 6.4 6.6 1.2 8.4 7 3 1 8 8 8 0 Leucine rich repeat AAA_12 PF13087.6 ORF56292 - 5.9e-44 150.1 0.0 1.1e-43 149.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF56292 - 6.6e-31 108.1 0.5 1.2e-28 100.7 0.5 2.5 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF56292 - 1.9e-13 51.0 0.0 1.7e-11 44.7 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF56292 - 8.5e-12 45.2 0.1 2.4e-06 27.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain DUF2075 PF09848.9 ORF56292 - 1.3e-08 34.5 0.2 0.00046 19.5 0.0 3.2 3 0 0 3 3 3 2 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 ORF56292 - 2.6e-06 27.4 0.2 0.022 14.5 0.0 3.4 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase UvrD-helicase PF00580.21 ORF56292 - 4.3e-05 23.2 0.1 0.00014 21.5 0.1 2.2 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_22 PF13401.6 ORF56292 - 0.00017 21.9 1.6 0.073 13.4 0.0 3.5 3 1 0 3 3 3 1 AAA domain ResIII PF04851.15 ORF56292 - 0.00028 20.9 0.0 0.00093 19.2 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 ORF56292 - 0.0005 19.9 0.1 0.0015 18.3 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase UvrD_C_2 PF13538.6 ORF56292 - 0.01 15.6 0.0 0.022 14.6 0.0 1.6 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain AAA_16 PF13191.6 ORF56292 - 0.013 15.9 0.3 0.21 12.0 0.0 2.7 2 0 0 2 2 2 0 AAA ATPase domain XdhC_C PF13478.6 ORF56292 - 0.019 15.5 0.1 9.4 6.8 0.0 2.6 2 0 0 2 2 2 0 XdhC Rossmann domain AAA PF00004.29 ORF56292 - 0.022 15.2 0.0 0.34 11.3 0.0 2.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 ORF56292 - 0.022 14.2 0.0 0.13 11.7 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein AAA_25 PF13481.6 ORF56292 - 0.061 12.9 0.5 0.37 10.4 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF56292 - 0.13 12.3 0.3 0.87 9.6 0.0 2.6 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) CheB_methylest PF01339.17 ORF56292 - 0.13 12.0 0.4 0.25 11.1 0.4 1.5 1 0 0 1 1 1 0 CheB methylesterase Dynein_C PF18199.1 ORF78156 - 2.5e-98 329.1 0.0 3.9e-98 328.4 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF78156 - 8.1e-57 191.6 0.2 1.7e-56 190.6 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF78156 - 1.7e-42 144.3 0.1 3.5e-42 143.3 0.1 1.6 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF69284 - 2.5e-98 329.1 0.0 3.9e-98 328.4 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF69284 - 8.1e-57 191.6 0.2 1.7e-56 190.6 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF69284 - 1.7e-42 144.3 0.1 3.5e-42 143.3 0.1 1.6 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain HNH PF01844.23 ORF6122 - 6.2e-06 26.3 2.5 1.3e-05 25.3 2.5 1.5 1 0 0 1 1 1 1 HNH endonuclease Endonuclease_7 PF02945.15 ORF6122 - 2.8 7.9 6.1 2.8 7.9 3.6 2.3 2 0 0 2 2 2 0 Recombination endonuclease VII HNH PF01844.23 ORF44413 - 6.2e-06 26.3 2.5 1.3e-05 25.3 2.5 1.5 1 0 0 1 1 1 1 HNH endonuclease Endonuclease_7 PF02945.15 ORF44413 - 2.8 7.9 6.1 2.8 7.9 3.6 2.3 2 0 0 2 2 2 0 Recombination endonuclease VII Dynein_C PF18199.1 ORF34921 - 2.5e-98 329.1 0.0 3.9e-98 328.4 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF34921 - 8.1e-57 191.6 0.2 1.7e-56 190.6 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF34921 - 1.7e-42 144.3 0.1 3.5e-42 143.3 0.1 1.6 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF33548 - 2.5e-98 329.1 0.0 3.9e-98 328.4 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF33548 - 8.1e-57 191.6 0.2 1.7e-56 190.6 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF33548 - 1.7e-42 144.3 0.1 3.5e-42 143.3 0.1 1.6 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain zf-RING_2 PF13639.6 ORF23208 - 1.7e-08 34.7 4.7 1.7e-08 34.7 4.7 3.0 3 0 0 3 3 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF23208 - 5.2e-07 29.4 7.1 1.9e-06 27.6 7.1 2.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF23208 - 9.3e-07 28.7 6.1 4.2e-06 26.6 6.1 2.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF23208 - 1.1e-06 28.6 3.0 3.3e-06 27.0 3.0 1.9 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF23208 - 0.00013 22.2 2.4 0.00013 22.2 2.4 2.5 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF23208 - 0.00017 21.6 1.0 0.00085 19.3 1.0 2.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 ORF23208 - 0.00034 20.3 3.1 0.00034 20.3 3.1 2.3 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF23208 - 0.00056 19.7 6.0 0.0015 18.3 6.0 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF23208 - 0.0039 17.3 5.1 0.022 14.9 5.1 2.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING DUF4448 PF14610.6 ORF23208 - 0.034 13.9 0.0 0.07 12.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) TMEM154 PF15102.6 ORF23208 - 0.067 13.1 0.0 0.17 11.8 0.0 1.7 1 0 0 1 1 1 0 TMEM154 protein family Prok-RING_4 PF14447.6 ORF23208 - 0.093 12.6 5.3 0.35 10.7 5.3 2.1 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF23208 - 0.13 12.5 4.0 0.3 11.2 4.0 1.7 1 0 0 1 1 1 0 RING-variant domain DUF2129 PF09902.9 ORF23208 - 0.19 11.8 3.5 0.44 10.6 3.5 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2129) Zn_ribbon_17 PF17120.5 ORF23208 - 1 9.0 9.1 0.059 13.0 2.6 2.5 2 0 0 2 2 1 0 Zinc-ribbon, C4HC2 type EF-hand_7 PF13499.6 ORF46269 - 1.7e-21 76.4 25.2 7.4e-06 26.3 1.2 6.8 6 1 0 6 6 6 5 EF-hand domain pair EF-hand_1 PF00036.32 ORF46269 - 7.7e-19 65.8 17.0 0.0033 16.9 0.6 8.7 7 1 0 7 7 7 6 EF hand EF-hand_6 PF13405.6 ORF46269 - 3.3e-18 64.0 23.6 0.015 15.2 1.1 10.3 8 2 1 9 9 9 6 EF-hand domain EF-hand_8 PF13833.6 ORF46269 - 2.6e-09 36.8 13.0 0.33 10.8 0.8 6.7 6 0 0 6 6 6 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF46269 - 3e-08 32.8 16.4 0.075 12.6 0.0 7.0 8 0 0 8 8 8 3 EF hand EF-hand_11 PF08976.11 ORF46269 - 0.22 12.4 3.3 1.5 9.7 0.0 3.6 4 0 0 4 4 4 0 EF-hand domain EF-hand_7 PF13499.6 ORF101464 - 1.7e-21 76.4 25.2 7.4e-06 26.3 1.2 6.8 6 1 0 6 6 6 5 EF-hand domain pair EF-hand_1 PF00036.32 ORF101464 - 7.7e-19 65.8 17.0 0.0033 16.9 0.6 8.7 7 1 0 7 7 7 6 EF hand EF-hand_6 PF13405.6 ORF101464 - 3.3e-18 64.0 23.6 0.015 15.2 1.1 10.3 8 2 1 9 9 9 6 EF-hand domain EF-hand_8 PF13833.6 ORF101464 - 2.6e-09 36.8 13.0 0.33 10.8 0.8 6.7 6 0 0 6 6 6 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF101464 - 3e-08 32.8 16.4 0.075 12.6 0.0 7.0 8 0 0 8 8 8 3 EF hand EF-hand_11 PF08976.11 ORF101464 - 0.22 12.4 3.3 1.5 9.7 0.0 3.6 4 0 0 4 4 4 0 EF-hand domain Ketoacyl-synt_C PF02801.22 ORF55561 - 2.5e-32 111.4 0.4 4.4e-32 110.6 0.4 1.4 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ketoacyl-synt PF00109.26 ORF55561 - 7.3e-31 107.6 0.0 2.2e-30 106.1 0.0 1.7 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain AMPK1_CBM PF16561.5 ORF55561 - 0.001 19.2 0.0 0.0027 17.9 0.0 1.7 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase KAsynt_C_assoc PF16197.5 ORF55561 - 0.0058 17.1 0.0 0.011 16.1 0.0 1.4 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension Kinesin PF00225.23 ORF37978 - 9.4e-50 169.4 1.5 9.4e-50 169.4 1.5 2.2 3 0 0 3 3 3 1 Kinesin motor domain FHA PF00498.26 ORF37978 - 1.6e-06 28.4 0.0 4.5e-06 26.9 0.0 1.8 1 0 0 1 1 1 1 FHA domain Kinesin_assoc PF16183.5 ORF37978 - 0.0013 18.9 3.8 0.0013 18.9 3.8 4.0 3 1 1 4 4 4 1 Kinesin-associated Baculo_PEP_C PF04513.12 ORF37978 - 2.8 8.0 4.8 1.3 9.0 0.2 2.7 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Borrelia_P83 PF05262.11 ORF37978 - 4.2 5.7 45.9 0.0066 15.0 12.2 3.1 3 0 0 3 3 3 0 Borrelia P83/100 protein Cullin PF00888.22 ORF17382 - 7.6e-38 130.5 9.3 7.6e-38 130.5 9.3 3.3 2 1 0 2 2 2 1 Cullin family Baculo_PEP_C PF04513.12 ORF17382 - 1.3e-05 25.2 33.6 0.013 15.5 1.6 6.7 2 2 3 6 6 6 4 Baculovirus polyhedron envelope protein, PEP, C terminus GAS PF13851.6 ORF17382 - 0.0015 17.9 10.1 0.0015 17.9 10.1 5.9 2 1 1 5 5 5 1 Growth-arrest specific micro-tubule binding Fib_alpha PF08702.10 ORF17382 - 0.32 11.2 44.0 0.62 10.2 1.6 7.1 1 1 3 6 6 6 0 Fibrinogen alpha/beta chain family GIT_CC PF16559.5 ORF17382 - 4.6 7.2 36.3 0.92 9.4 0.1 7.4 7 2 1 8 8 8 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF1664 PF07889.12 ORF17382 - 5.5 7.1 46.0 0.11 12.6 2.5 8.1 3 2 5 9 9 9 0 Protein of unknown function (DUF1664) Glycos_transf_2 PF00535.26 ORF87163 - 1.5e-24 86.8 0.0 2.9e-24 85.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF87163 - 2.1e-08 34.4 0.0 4.7e-08 33.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 ORF87163 - 0.00036 21.0 0.0 0.0015 19.0 0.0 2.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 ORF87163 - 0.0013 18.3 0.0 0.0019 17.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 TLV_coat PF00429.19 ORF87163 - 0.039 12.6 0.0 0.06 12.0 0.0 1.2 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) Glycos_transf_2 PF00535.26 ORF106186 - 1.5e-24 86.8 0.0 2.9e-24 85.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF106186 - 2.1e-08 34.4 0.0 4.7e-08 33.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 ORF106186 - 0.00036 21.0 0.0 0.0015 19.0 0.0 2.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 ORF106186 - 0.0013 18.3 0.0 0.0019 17.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 TLV_coat PF00429.19 ORF106186 - 0.039 12.6 0.0 0.06 12.0 0.0 1.2 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) OHA PF14418.6 ORF28661 - 0.13 12.1 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 OST-HTH Associated domain ILEI PF15711.5 ORF38840 - 9.8e-38 128.5 0.0 4.5e-18 65.5 0.0 2.5 2 0 0 2 2 2 2 Interleukin-like EMT inducer TMF_TATA_bd PF12325.8 ORF58912 - 0.00075 19.7 5.3 0.00075 19.7 5.3 7.9 3 1 3 7 7 7 2 TATA element modulatory factor 1 TATA binding TSC22 PF01166.18 ORF58912 - 0.0025 18.1 0.7 0.0025 18.1 0.7 9.1 8 3 2 10 10 10 1 TSC-22/dip/bun family TPR_MLP1_2 PF07926.12 ORF58912 - 0.0038 17.3 9.3 0.0038 17.3 9.3 7.2 3 2 3 6 6 6 1 TPR/MLP1/MLP2-like protein DUF1461 PF07314.11 ORF58912 - 0.3 11.0 0.6 1.2 9.0 0.6 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) PEP-utilizers_C PF02896.18 ORF4909 - 1.9e-114 381.8 0.0 2.5e-114 381.4 0.0 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PTS_EIIA_2 PF00359.22 ORF4909 - 5.4e-31 107.4 0.0 9.7e-31 106.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PEP-utilizers PF00391.23 ORF4909 - 5.7e-16 58.0 0.0 1.5e-15 56.7 0.0 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PTS-HPr PF00381.19 ORF4909 - 4.2e-12 46.1 0.0 1.2e-11 44.7 0.0 1.8 1 0 0 1 1 1 1 PTS HPr component phosphorylation site PEP-utilisers_N PF05524.13 ORF4909 - 5.2e-11 42.7 0.3 1.9e-10 40.9 0.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, N-terminal C2 PF00168.30 ORF29581 - 7.3e-06 26.2 0.0 0.2 12.0 0.0 3.5 4 0 0 4 4 4 2 C2 domain Glycos_transf_2 PF00535.26 ORF66018 - 1.4e-24 86.8 0.0 2.8e-24 85.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF66018 - 2e-08 34.4 0.0 4.6e-08 33.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 ORF66018 - 0.00036 21.0 0.0 0.0015 19.0 0.0 2.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 ORF66018 - 0.0012 18.3 0.0 0.0019 17.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 TLV_coat PF00429.19 ORF66018 - 0.038 12.7 0.0 0.059 12.0 0.0 1.1 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) Glycos_transf_2 PF00535.26 ORF23854 - 1.4e-24 86.8 0.0 2.8e-24 85.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF23854 - 2e-08 34.4 0.0 4.6e-08 33.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 ORF23854 - 0.00036 21.0 0.0 0.0015 19.0 0.0 2.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 ORF23854 - 0.0012 18.3 0.0 0.0019 17.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 TLV_coat PF00429.19 ORF23854 - 0.038 12.7 0.0 0.059 12.0 0.0 1.1 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) VWA PF00092.28 ORF25674 - 1.5e-09 38.4 1.3 2.2e-08 34.5 0.0 3.2 3 0 0 3 3 3 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF25674 - 2.4e-09 37.8 5.5 3.4e-07 30.9 0.0 4.7 5 0 0 5 5 5 2 von Willebrand factor type A domain DUF2201 PF09967.9 ORF25674 - 0.01 16.0 0.0 0.044 13.9 0.0 2.2 1 0 0 1 1 1 0 VWA-like domain (DUF2201) vWA-TerF-like PF10138.9 ORF25674 - 0.016 15.3 0.8 0.051 13.7 0.0 2.3 2 0 0 2 2 2 0 vWA found in TerF C terminus SAP PF02037.27 ORF25674 - 0.044 13.6 0.1 0.18 11.6 0.1 2.1 1 0 0 1 1 1 0 SAP domain AAA PF00004.29 ORF98622 - 1.5e-16 61.0 0.0 4.6e-16 59.4 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF98622 - 0.00017 22.0 0.0 0.00056 20.3 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF98622 - 0.00025 21.1 0.0 0.00061 19.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF98622 - 0.00032 20.9 0.0 0.0014 18.8 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF98622 - 0.00033 20.4 0.0 0.00084 19.1 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF98622 - 0.0009 19.5 0.0 0.036 14.3 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF98622 - 0.004 16.4 0.0 0.0098 15.1 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF98622 - 0.005 16.5 0.1 0.079 12.6 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF98622 - 0.0074 16.8 0.0 0.039 14.5 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF98622 - 0.012 15.2 0.0 0.12 11.9 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF98622 - 0.014 15.1 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF98622 - 0.023 14.1 0.0 0.043 13.2 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF98622 - 0.024 14.3 0.0 0.024 14.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF98622 - 0.026 14.9 0.0 0.086 13.2 0.0 2.0 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF98622 - 0.027 14.2 0.0 0.061 13.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF98622 - 0.034 13.2 0.0 0.083 12.0 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF98622 - 0.077 13.1 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF98622 - 0.085 12.6 0.0 0.085 12.6 0.0 3.9 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF98622 - 0.085 12.4 0.0 0.21 11.1 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF98622 - 0.13 12.1 0.8 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA_33 PF13671.6 ORF98622 - 0.16 12.1 0.0 0.47 10.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain HrpB_C PF08482.10 ORF647 - 1.5e-54 184.0 0.1 3.7e-54 182.7 0.1 1.7 1 0 0 1 1 1 1 ATP-dependent helicase C-terminal Helicase_C PF00271.31 ORF647 - 5.5e-11 42.8 0.0 9.7e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF647 - 1.2e-09 38.1 0.0 2.2e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase HA2 PF04408.23 ORF647 - 1e-07 32.2 0.1 2.2e-07 31.1 0.1 1.6 1 0 0 1 1 1 1 Helicase associated domain (HA2) AAA PF00004.29 ORF59495 - 1.5e-16 61.0 0.0 4.6e-16 59.4 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF59495 - 0.00017 22.0 0.0 0.00056 20.3 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF59495 - 0.00025 21.1 0.0 0.00061 19.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF59495 - 0.00032 20.9 0.0 0.0014 18.8 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF59495 - 0.00033 20.4 0.0 0.00084 19.1 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF59495 - 0.0009 19.5 0.0 0.036 14.3 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF59495 - 0.004 16.4 0.0 0.0098 15.1 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF59495 - 0.005 16.5 0.1 0.079 12.6 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF59495 - 0.0074 16.8 0.0 0.039 14.5 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF59495 - 0.012 15.2 0.0 0.12 11.9 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF59495 - 0.014 15.1 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF59495 - 0.023 14.1 0.0 0.043 13.2 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF59495 - 0.024 14.3 0.0 0.024 14.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF59495 - 0.026 14.9 0.0 0.086 13.2 0.0 2.0 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF59495 - 0.027 14.2 0.0 0.061 13.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF59495 - 0.034 13.2 0.0 0.083 12.0 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF59495 - 0.077 13.1 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF59495 - 0.085 12.6 0.0 0.085 12.6 0.0 3.9 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF59495 - 0.085 12.4 0.0 0.21 11.1 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF59495 - 0.13 12.1 0.8 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA_33 PF13671.6 ORF59495 - 0.16 12.1 0.0 0.47 10.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF41977 - 1.5e-16 61.0 0.0 4.6e-16 59.4 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF41977 - 0.00017 22.0 0.0 0.00056 20.3 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF41977 - 0.00025 21.1 0.0 0.00061 19.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF41977 - 0.00032 20.9 0.0 0.0014 18.8 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF41977 - 0.00033 20.4 0.0 0.00084 19.1 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF41977 - 0.0009 19.5 0.0 0.036 14.3 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF41977 - 0.004 16.4 0.0 0.0098 15.1 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF41977 - 0.005 16.5 0.1 0.079 12.6 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF41977 - 0.0074 16.8 0.0 0.039 14.5 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF41977 - 0.012 15.2 0.0 0.12 11.9 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF41977 - 0.014 15.1 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF41977 - 0.023 14.1 0.0 0.043 13.2 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF41977 - 0.024 14.3 0.0 0.024 14.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF41977 - 0.026 14.9 0.0 0.086 13.2 0.0 2.0 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF41977 - 0.027 14.2 0.0 0.061 13.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF41977 - 0.034 13.2 0.0 0.083 12.0 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF41977 - 0.077 13.1 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF41977 - 0.085 12.6 0.0 0.085 12.6 0.0 3.9 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF41977 - 0.085 12.4 0.0 0.21 11.1 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF41977 - 0.13 12.1 0.8 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA_33 PF13671.6 ORF41977 - 0.16 12.1 0.0 0.47 10.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF41596 - 1.5e-16 61.0 0.0 4.6e-16 59.4 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF41596 - 0.00017 22.0 0.0 0.00056 20.3 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF41596 - 0.00025 21.1 0.0 0.00061 19.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF41596 - 0.00032 20.9 0.0 0.0014 18.8 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF41596 - 0.00033 20.4 0.0 0.00084 19.1 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF41596 - 0.0009 19.5 0.0 0.036 14.3 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF41596 - 0.004 16.4 0.0 0.0098 15.1 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF41596 - 0.005 16.5 0.1 0.079 12.6 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF41596 - 0.0074 16.8 0.0 0.039 14.5 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF41596 - 0.012 15.2 0.0 0.12 11.9 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF41596 - 0.014 15.1 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF41596 - 0.023 14.1 0.0 0.043 13.2 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF41596 - 0.024 14.3 0.0 0.024 14.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF41596 - 0.026 14.9 0.0 0.086 13.2 0.0 2.0 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF41596 - 0.027 14.2 0.0 0.061 13.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF41596 - 0.034 13.2 0.0 0.083 12.0 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF41596 - 0.077 13.1 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF41596 - 0.085 12.6 0.0 0.085 12.6 0.0 3.9 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF41596 - 0.085 12.4 0.0 0.21 11.1 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF41596 - 0.13 12.1 0.8 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA_33 PF13671.6 ORF41596 - 0.16 12.1 0.0 0.47 10.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF40608 - 7.4e-07 29.7 0.0 1e-05 26.0 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 ORF40608 - 0.00019 21.4 1.5 0.63 9.9 0.0 3.6 3 0 0 3 3 3 1 NACHT domain AAA_22 PF13401.6 ORF40608 - 0.0002 21.6 0.2 0.88 9.8 0.0 2.8 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.6 ORF40608 - 0.00049 20.5 0.4 0.0034 17.8 0.1 2.8 2 1 1 3 3 3 1 AAA ATPase domain AAA_30 PF13604.6 ORF40608 - 0.0011 18.8 0.0 0.021 14.6 0.0 2.4 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF40608 - 0.0016 18.2 0.0 0.0049 16.6 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein Viral_helicase1 PF01443.18 ORF40608 - 0.002 17.9 0.0 0.0036 17.1 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_14 PF13173.6 ORF40608 - 0.005 16.9 0.0 0.0096 16.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF40608 - 0.0054 17.1 1.1 1.6 9.1 0.2 3.1 2 1 1 3 3 3 1 AAA domain RuvB_N PF05496.12 ORF40608 - 0.015 15.0 0.0 0.033 14.0 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Zeta_toxin PF06414.12 ORF40608 - 0.016 14.5 0.0 0.067 12.5 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin AAA_11 PF13086.6 ORF40608 - 0.021 14.6 0.0 0.04 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 ORF40608 - 0.058 13.4 0.0 0.21 11.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) Adeno_IVa2 PF02456.15 ORF40608 - 0.068 12.0 0.0 0.16 10.7 0.0 1.5 1 0 0 1 1 1 0 Adenovirus IVa2 protein KAP_NTPase PF07693.14 ORF40608 - 0.16 11.1 0.0 0.29 10.3 0.0 1.3 1 0 0 1 1 1 0 KAP family P-loop domain Mac PF12464.8 ORF40608 - 0.83 9.9 2.8 31 4.9 0.6 2.8 2 0 0 2 2 2 0 Maltose acetyltransferase AAA PF00004.29 ORF39830 - 1.5e-16 61.0 0.0 4.6e-16 59.4 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF39830 - 0.00017 22.0 0.0 0.00056 20.3 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF39830 - 0.00025 21.1 0.0 0.00061 19.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF39830 - 0.00032 20.9 0.0 0.0014 18.8 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF39830 - 0.00033 20.4 0.0 0.00084 19.1 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF39830 - 0.0009 19.5 0.0 0.036 14.3 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF39830 - 0.004 16.4 0.0 0.0098 15.1 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF39830 - 0.005 16.5 0.1 0.079 12.6 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF39830 - 0.0074 16.8 0.0 0.039 14.5 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF39830 - 0.012 15.2 0.0 0.12 11.9 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF39830 - 0.014 15.1 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF39830 - 0.023 14.1 0.0 0.043 13.2 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF39830 - 0.024 14.3 0.0 0.024 14.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF39830 - 0.026 14.9 0.0 0.086 13.2 0.0 2.0 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF39830 - 0.027 14.2 0.0 0.061 13.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF39830 - 0.034 13.2 0.0 0.083 12.0 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF39830 - 0.077 13.1 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF39830 - 0.085 12.6 0.0 0.085 12.6 0.0 3.9 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF39830 - 0.085 12.4 0.0 0.21 11.1 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF39830 - 0.13 12.1 0.8 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA_33 PF13671.6 ORF39830 - 0.16 12.1 0.0 0.47 10.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF108623 - 1.5e-16 61.0 0.0 4.6e-16 59.4 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF108623 - 0.00017 22.0 0.0 0.00056 20.3 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF108623 - 0.00025 21.1 0.0 0.00061 19.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF108623 - 0.00032 20.9 0.0 0.0014 18.8 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF108623 - 0.00033 20.4 0.0 0.00084 19.1 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF108623 - 0.0009 19.5 0.0 0.036 14.3 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF108623 - 0.004 16.4 0.0 0.0098 15.1 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF108623 - 0.005 16.5 0.1 0.079 12.6 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF108623 - 0.0074 16.8 0.0 0.039 14.5 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF108623 - 0.012 15.2 0.0 0.12 11.9 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF108623 - 0.014 15.1 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF108623 - 0.023 14.1 0.0 0.043 13.2 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF108623 - 0.024 14.3 0.0 0.024 14.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF108623 - 0.026 14.9 0.0 0.086 13.2 0.0 2.0 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF108623 - 0.027 14.2 0.0 0.061 13.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF108623 - 0.034 13.2 0.0 0.083 12.0 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF108623 - 0.077 13.1 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF108623 - 0.085 12.6 0.0 0.085 12.6 0.0 3.9 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF108623 - 0.085 12.4 0.0 0.21 11.1 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF108623 - 0.13 12.1 0.8 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA_33 PF13671.6 ORF108623 - 0.16 12.1 0.0 0.47 10.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain HMG-CoA_red PF00368.18 ORF79906 - 8.6e-93 311.3 1.2 1.2e-92 310.8 1.2 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase PAN_1 PF00024.26 ORF6156 - 2.2e-05 24.3 10.5 0.0018 18.2 0.0 3.1 3 0 0 3 3 3 2 PAN domain PAN_4 PF14295.6 ORF6156 - 2.5e-05 24.1 8.8 0.017 15.0 0.4 3.5 3 0 0 3 3 3 2 PAN domain PKD_channel PF08016.12 ORF52003 - 9.5e-12 44.3 24.2 4.8e-11 42.0 15.6 2.4 2 0 0 2 2 2 2 Polycystin cation channel Ion_trans PF00520.31 ORF52003 - 0.0025 17.1 17.9 0.0025 17.1 17.9 2.1 2 1 0 2 2 2 1 Ion transport protein NPV_P10 PF05531.12 ORF52003 - 0.16 12.5 0.6 1.7 9.2 0.1 2.5 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Dynein_C PF18199.1 ORF97552 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF97552 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF97552 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF89998 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF89998 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF89998 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF822 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF822 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF822 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF78415 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF78415 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF78415 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF65839 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF65839 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF65839 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF35034 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF35034 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF35034 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF111936 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF111936 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF111936 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF10066 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF10066 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF10066 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain PAN_1 PF00024.26 ORF82558 - 2.2e-05 24.3 10.5 0.0017 18.2 0.0 3.1 3 0 0 3 3 3 2 PAN domain PAN_4 PF14295.6 ORF82558 - 2.4e-05 24.1 8.8 0.017 15.0 0.4 3.5 3 0 0 3 3 3 2 PAN domain DHC_N2 PF08393.13 ORF8135 - 1.1e-60 205.9 0.1 1.1e-60 205.9 0.1 1.9 2 1 0 2 2 2 1 Dynein heavy chain, N-terminal region 2 PCI PF01399.27 ORF8135 - 0.039 14.5 0.4 0.039 14.5 0.4 2.9 4 0 0 4 4 4 0 PCI domain PHM7_cyt PF14703.6 ORF8135 - 0.12 12.6 1.0 2.9 8.1 0.0 2.8 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter zf-RING_9 PF13901.6 ORF8135 - 6.2 6.7 10.3 0.12 12.3 0.9 3.0 4 1 0 4 4 4 0 Putative zinc-RING and/or ribbon DHC_N2 PF08393.13 ORF46477 - 1.1e-60 205.9 0.1 1.1e-60 205.9 0.1 1.9 2 1 0 2 2 2 1 Dynein heavy chain, N-terminal region 2 PCI PF01399.27 ORF46477 - 0.039 14.5 0.4 0.039 14.5 0.4 2.9 4 0 0 4 4 4 0 PCI domain PHM7_cyt PF14703.6 ORF46477 - 0.12 12.6 1.0 2.9 8.1 0.0 2.8 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter zf-RING_9 PF13901.6 ORF46477 - 6.2 6.7 10.3 0.12 12.3 0.9 3.0 4 1 0 4 4 4 0 Putative zinc-RING and/or ribbon AAA_12 PF13087.6 ORF31106 - 1.9e-48 164.7 0.0 4.8e-48 163.4 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 ORF31106 - 2.1e-36 126.0 0.9 1e-19 71.4 0.3 2.5 2 1 1 3 3 2 2 AAA domain AAA_30 PF13604.6 ORF31106 - 1.6e-12 47.5 0.2 1.3e-11 44.6 0.2 2.3 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 ORF31106 - 6e-10 39.6 0.0 3.8e-09 37.0 0.0 2.2 2 1 0 2 2 2 1 AAA domain WW PF00397.26 ORF31106 - 9.6e-07 28.8 9.2 2.4e-06 27.5 9.2 1.6 1 0 0 1 1 1 1 WW domain Viral_helicase1 PF01443.18 ORF31106 - 2e-05 24.5 0.0 0.0037 17.0 0.0 3.0 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.9 ORF31106 - 0.0011 18.3 0.1 0.27 10.4 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 ORF31106 - 0.0026 17.7 0.0 0.038 13.9 0.0 2.8 4 0 0 4 4 4 1 NACHT domain DEAD PF00270.29 ORF31106 - 0.0029 17.4 0.0 0.0098 15.7 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase PhoH PF02562.16 ORF31106 - 0.0044 16.5 0.0 0.021 14.3 0.0 2.0 2 0 0 2 2 2 1 PhoH-like protein IstB_IS21 PF01695.17 ORF31106 - 0.01 15.6 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA PF00004.29 ORF31106 - 0.014 15.8 0.0 0.033 14.6 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 ORF31106 - 0.022 14.4 0.0 0.058 13.0 0.0 1.8 1 0 0 1 1 1 0 AAA domain UvrD-helicase PF00580.21 ORF31106 - 0.085 12.4 0.3 0.19 11.2 0.0 1.8 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain ResIII PF04851.15 ORF31106 - 0.16 12.0 0.0 0.29 11.1 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit V-ATPase_G_2 PF16999.5 ORF31106 - 0.71 10.3 3.7 0.21 12.0 0.3 1.8 2 0 0 2 2 1 0 Vacuolar (H+)-ATPase G subunit AAA_16 PF13191.6 ORF31106 - 1.7 9.0 5.1 1 9.7 0.2 3.1 2 1 1 3 3 3 0 AAA ATPase domain PP-binding PF00550.25 ORF56228 - 9.1e-24 83.6 2.8 6.5e-11 42.4 0.1 2.6 2 0 0 2 2 2 2 Phosphopantetheine attachment site TPR_12 PF13424.6 ORF56228 - 3.5e-07 30.4 39.6 0.00086 19.5 0.3 7.2 6 1 1 7 7 7 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF56228 - 0.0036 17.3 23.3 2.1 8.7 0.2 8.0 9 0 0 9 9 9 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF56228 - 0.01 16.0 13.9 0.22 11.7 0.4 5.1 3 1 1 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 ANAPC5 PF12862.7 ORF56228 - 0.074 13.1 17.4 0.23 11.6 1.3 4.8 4 1 1 5 5 5 0 Anaphase-promoting complex subunit 5 TPR_16 PF13432.6 ORF56228 - 0.11 13.1 38.7 0.38 11.4 1.4 7.9 6 2 2 8 8 8 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF56228 - 0.69 10.1 6.1 34 4.8 0.1 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF56228 - 1.6 9.8 41.6 4.2 8.4 2.1 9.1 7 1 2 9 9 9 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF56228 - 3.3 8.2 10.6 38 4.9 0.1 5.7 7 1 0 7 7 7 0 Tetratricopeptide repeat SelK_SelG PF10961.8 ORF56228 - 6.2 7.5 5.5 3.2 8.4 1.9 2.3 2 0 0 2 2 2 0 Selenoprotein SelK_SelG LRR_6 PF13516.6 ORF12369 - 2.3e-16 58.4 21.6 0.00085 19.2 0.1 9.2 9 0 0 9 9 9 4 Leucine Rich repeat LRR_4 PF12799.7 ORF12369 - 0.00094 19.5 0.9 0.00094 19.5 0.9 9.3 8 4 3 11 11 11 4 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF12369 - 0.0048 17.3 21.0 7.5 7.5 0.0 9.5 10 1 0 10 10 10 1 Leucine Rich Repeat RRM_1 PF00076.22 ORF12369 - 0.079 12.8 0.0 0.21 11.4 0.0 1.8 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Phage_glycop_gL PF11108.8 ORF12369 - 0.13 12.3 0.1 0.13 12.3 0.1 2.0 2 0 0 2 2 2 0 Viral glycoprotein L PFL-like PF02901.15 ORF19580 - 3.9e-207 689.9 0.0 4.8e-207 689.6 0.0 1.0 1 0 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 ORF19580 - 7.5e-31 106.8 0.0 2.5e-30 105.1 0.0 2.0 1 0 0 1 1 1 1 Glycine radical DUF3029 PF11230.8 ORF19580 - 0.018 13.4 0.0 0.29 9.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3029) ASH PF15780.5 ORF108161 - 3.3e-10 40.0 0.0 0.00016 21.8 0.0 2.9 3 0 0 3 3 3 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Motile_Sperm PF00635.26 ORF108161 - 1.6e-05 24.7 0.1 0.092 12.6 0.0 3.1 3 0 0 3 3 3 2 MSP (Major sperm protein) domain TMEM131_like PF12371.8 ORF108161 - 0.0018 18.5 0.2 0.049 13.9 0.0 2.8 3 0 0 3 3 3 1 Transmembrane protein 131-like PapD-like PF14874.6 ORF108161 - 0.014 15.5 0.0 0.044 13.9 0.0 1.8 2 0 0 2 2 2 0 Flagellar-associated PapD-like Glyco_hydro_2_C PF02836.17 ORF17194 - 2.9e-57 194.1 0.4 4.1e-57 193.6 0.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Bgal_small_N PF02929.17 ORF17194 - 3.8e-49 167.5 0.0 1.5e-39 136.1 0.0 2.4 2 0 0 2 2 2 2 Beta galactosidase small chain DUF4981 PF16353.5 ORF17194 - 1e-16 61.2 0.0 2.5e-16 59.9 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function(DUF4981) tRNA-synt_1 PF00133.22 ORF48849 - 8.5e-168 559.3 0.0 1.2e-166 555.5 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF48849 - 1.2e-42 145.4 0.0 3.1e-42 144.1 0.0 1.7 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA Val_tRNA-synt_C PF10458.9 ORF48849 - 1.7e-16 60.2 6.8 4.4e-16 58.9 6.8 1.7 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1_2 PF13603.6 ORF48849 - 4.4e-09 36.1 0.0 1.4e-06 28.0 0.0 2.5 1 1 1 2 2 2 2 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1g PF09334.11 ORF48849 - 9.3e-09 34.5 0.2 0.0014 17.5 0.0 4.1 4 1 0 4 4 4 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 ORF48849 - 0.036 13.0 0.0 0.058 12.3 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (K) ABC_tran_CTD PF16326.5 ORF48849 - 0.12 12.6 4.9 0.32 11.3 4.9 1.7 1 0 0 1 1 1 0 ABC transporter C-terminal domain tRNA-synt_1b PF00579.25 ORF48849 - 0.2 10.9 1.8 0.21 10.8 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) PPDK_N PF01326.19 ORF107290 - 1.1e-17 64.3 0.0 3.2e-08 33.2 0.0 4.2 2 2 2 4 4 4 3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DUF3492 PF11997.8 ORF107290 - 0.077 12.7 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3492) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks3.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks3.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks3.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks3.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:08:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4309 PF14172.6 NODE_82490_length_192_cov_35.751592_g74549_i0forward_frame_2 - 0.047 13.7 0.1 0.051 13.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) Peptidase_C48 PF02902.19 NODE_82486_length_192_cov_38.910828_g74545_i0forward_frame_3 - 0.059 13.2 0.1 0.062 13.1 0.1 1.1 1 0 0 1 1 1 0 Ulp1 protease family, C-terminal catalytic domain TMCCDC2 PF15844.5 NODE_82480_length_192_cov_42.305732_g74539_i0reverse_frame_3 - 0.024 14.6 0.5 0.024 14.5 0.5 1.0 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 His_kinase PF06580.13 NODE_82477_length_192_cov_44.031847_g74536_i0reverse_frame_3 - 0.12 12.8 0.2 0.13 12.6 0.2 1.1 1 0 0 1 1 1 0 Histidine kinase FBA_3 PF08268.12 NODE_82475_length_192_cov_46.936306_g74534_i0forward_frame_2 - 0.061 13.3 0.0 0.064 13.2 0.0 1.1 1 0 0 1 1 1 0 F-box associated domain BBS2_N PF14781.6 NODE_82473_length_192_cov_47.165605_g74532_i0reverse_frame_2 - 1.8e-08 34.2 0.1 2.5e-08 33.7 0.1 1.3 1 0 0 1 1 1 1 Ciliary BBSome complex subunit 2, N-terminal Stomagen PF16851.5 NODE_82471_length_192_cov_48.350318_g74530_i0forward_frame_2 - 0.021 14.8 0.0 0.027 14.5 0.0 1.2 1 0 0 1 1 1 0 Stomagen MORN PF02493.20 NODE_82456_length_192_cov_77.700637_g74515_i0reverse_frame_2 - 2.6e-07 30.1 6.1 0.0039 17.0 0.3 2.5 2 0 0 2 2 2 2 MORN repeat DUF1496 PF07383.12 NODE_82452_length_192_cov_83.248408_g74511_i0forward_frame_3 - 0.15 11.6 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1496) RPAP1_N PF08621.10 NODE_82450_length_192_cov_87.560510_g74509_i0reverse_frame_2 - 0.042 13.6 0.1 0.042 13.6 0.1 1.5 2 0 0 2 2 2 0 RPAP1-like, N-terminal Pox_A_type_inc PF04508.12 NODE_82450_length_192_cov_87.560510_g74509_i0reverse_frame_2 - 0.82 9.6 5.9 0.85 9.6 0.3 2.7 2 2 0 2 2 2 0 Viral A-type inclusion protein repeat Tmemb_40 PF10160.9 NODE_82447_length_192_cov_99.573248_g74506_i0forward_frame_2 - 0.012 15.0 1.0 0.014 14.9 1.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein HEAT_EZ PF13513.6 NODE_82446_length_192_cov_101.248408_g74505_i0reverse_frame_3 - 0.085 13.4 0.9 0.96 10.0 0.9 2.0 1 1 0 1 1 1 0 HEAT-like repeat Cadherin_tail PF15974.5 NODE_82441_length_192_cov_142.235669_g74500_i0forward_frame_2 - 0.19 12.1 6.0 0.22 11.9 6.0 1.0 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region S1FA PF04689.13 NODE_82440_length_192_cov_184.445860_g74499_i0reverse_frame_3 - 0.013 15.6 0.5 0.021 14.9 0.5 1.4 1 0 0 1 1 1 0 DNA binding protein S1FA DUF2628 PF10947.8 NODE_82440_length_192_cov_184.445860_g74499_i0forward_frame_3 - 3.9 7.9 6.5 3.7 8.0 6.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) GATase_2 PF00310.21 NODE_82438_length_192_cov_226.630573_g74497_i0reverse_frame_2 - 0.048 12.4 0.6 0.049 12.3 0.6 1.0 1 0 0 1 1 1 0 Glutamine amidotransferases class-II Zap1_zf2 PF18217.1 NODE_82436_length_192_cov_782.904459_g74495_i0forward_frame_2 - 0.23 11.5 2.2 0.38 10.8 2.2 1.3 1 0 0 1 1 1 0 Zap1 zinc finger 2 MuF_C PF18819.1 ORF99604 - 0.071 13.1 0.0 0.079 13.0 0.0 1.1 1 0 0 1 1 1 0 Phage MuF-C-terminal domain TMEM252 PF15664.5 ORF99568 - 0.53 10.0 1.5 0.54 10.0 1.5 1.1 1 0 0 1 1 1 0 Transmembrane protein 252 family R3H PF01424.22 ORF9951 - 0.095 12.7 0.7 0.12 12.4 0.7 1.2 1 0 0 1 1 1 0 R3H domain Deltameth_res PF16020.5 ORF9949 - 0.066 13.1 0.4 0.11 12.3 0.4 1.4 1 0 0 1 1 1 0 Deltamethrin resistance Atg14 PF10186.9 ORF98113 - 0.049 12.7 0.7 0.054 12.6 0.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3269 PF11673.8 ORF98113 - 0.056 13.8 1.1 0.11 12.9 1.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3269) DUF4774 PF15999.5 ORF98071 - 0.1 12.4 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4774) MatE PF01554.18 ORF97973 - 1.2e-07 31.5 1.2 1.3e-07 31.4 1.2 1.0 1 0 0 1 1 1 1 MatE PRP21_like_P PF12230.8 ORF97970 - 0.046 13.6 0.0 0.047 13.6 0.0 1.0 1 0 0 1 1 1 0 Pre-mRNA splicing factor PRP21 like protein DUF4775 PF16001.5 ORF97970 - 0.058 12.8 0.7 0.055 12.9 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4775) DUF5313 PF17240.2 ORF97862 - 0.2 12.1 0.6 0.22 12.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Asp4 PF16996.5 ORF97862 - 1.3 8.9 6.1 1.9 8.3 6.1 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ycf1 PF05758.12 ORF97862 - 3.1 5.6 7.5 3.1 5.5 7.5 1.0 1 0 0 1 1 1 0 Ycf1 DnaJ_C PF01556.18 ORF97794 - 0.0038 17.3 0.0 0.0051 16.9 0.0 1.3 1 0 0 1 1 1 1 DnaJ C terminal domain DUF5402 PF17393.2 ORF97794 - 0.0081 16.1 0.1 0.009 16.0 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5402) zf-C2H2_4 PF13894.6 ORF97614 - 0.0012 19.5 1.5 0.0021 18.7 1.5 1.4 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF97614 - 0.0014 19.0 1.6 0.0023 18.3 1.6 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 ORF97614 - 0.0058 16.6 1.5 0.0079 16.2 1.5 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-H2C2_5 PF13909.6 ORF97614 - 0.11 12.2 2.2 0.22 11.3 2.2 1.5 1 0 0 1 1 1 0 C2H2-type zinc-finger domain zf-H2C2_2 PF13465.6 ORF97614 - 4.7 7.8 8.4 6 7.5 3.8 2.3 2 1 0 2 2 2 0 Zinc-finger double domain DUF3927 PF13064.6 ORF97206 - 0.057 13.4 0.1 0.1 12.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) L31 PF09784.9 ORF97205 - 0.042 14.3 0.2 0.048 14.1 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 Vps16_N PF04841.13 ORF97178 - 1.4e-09 37.2 0.0 1.5e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 Vps16, N-terminal region HHH_4 PF14490.6 ORF97178 - 0.037 14.0 0.0 0.046 13.7 0.0 1.2 1 0 0 1 1 1 0 Helix-hairpin-helix containing domain RE_Eco47II PF09553.10 ORF97178 - 0.058 13.0 0.1 0.061 12.9 0.1 1.0 1 0 0 1 1 1 0 Eco47II restriction endonuclease Secapin PF17521.2 ORF97002 - 0.00089 19.0 0.2 0.00089 19.0 0.2 2.1 2 1 0 2 2 2 1 Honey bee peptides CHAD PF05235.14 ORF9696 - 0.067 13.2 2.0 0.43 10.5 2.0 1.9 1 1 0 1 1 1 0 CHAD domain ParD_like PF11903.8 ORF9669 - 0.42 10.7 5.3 4.1 7.6 1.3 2.2 1 1 1 2 2 2 0 ParD-like antitoxin of type II bacterial toxin-antitoxin system LpxB PF02684.15 ORF96441 - 0.25 10.1 0.0 0.3 9.9 0.0 1.0 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase Peptidase_M17 PF00883.21 ORF95907 - 1e-05 25.0 0.0 1.1e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain REPA_OB_2 PF16900.5 ORF95570 - 0.0046 16.9 0.3 0.0059 16.5 0.3 1.2 1 0 0 1 1 1 1 Replication protein A OB domain TIC20 PF16166.5 ORF95552 - 0.088 12.6 0.0 0.089 12.6 0.0 1.0 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like FXa_inhibition PF14670.6 ORF95498 - 0.065 13.5 1.8 0.37 11.1 1.9 1.9 1 1 0 1 1 1 0 Coagulation Factor Xa inhibitory site Ribosomal_S14 PF00253.21 ORF95310 - 0.3 10.9 4.4 0.15 11.9 0.9 1.9 2 0 0 2 2 2 0 Ribosomal protein S14p/S29e TMC PF07810.13 ORF95003 - 0.0083 16.7 0.1 0.0093 16.5 0.1 1.1 1 0 0 1 1 1 1 TMC domain DUF5493 PF17597.2 ORF95003 - 0.0088 16.3 0.1 0.01 16.1 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5493) SLATT_fungal PF18142.1 ORF94820 - 0.11 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain DUF1922 PF09082.10 ORF94476 - 0.077 13.3 0.2 0.077 13.3 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF1922) HTH_20 PF12840.7 ORF94344 - 0.078 13.1 0.3 0.1 12.7 0.3 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3287 PF11690.8 ORF93689 - 0.015 15.0 2.8 0.02 14.6 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) DUF898 PF05987.13 ORF93593 - 0.039 13.0 1.9 0.036 13.1 1.9 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) MTTB PF06253.11 ORF93117 - 0.027 12.5 0.0 0.028 12.4 0.0 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) Flp1_like PF16982.5 ORF92867 - 0.052 13.0 1.0 0.052 13.0 1.0 2.1 2 0 0 2 2 2 0 Putative Flagellin, Flp1-like, domain NodZ PF05830.11 ORF92866 - 0.1 11.4 0.1 0.1 11.4 0.1 1.0 1 0 0 1 1 1 0 Nodulation protein Z (NodZ) OAD_gamma PF04277.13 ORF92675 - 0.0049 17.4 0.1 0.0058 17.2 0.1 1.2 1 0 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain SieB PF14163.6 ORF92675 - 0.013 14.9 0.1 0.015 14.8 0.1 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B Protocadherin PF08374.11 ORF92675 - 0.038 14.0 0.3 0.038 14.0 0.3 1.0 1 0 0 1 1 1 0 Protocadherin DUF4446 PF14584.6 ORF92675 - 0.046 13.7 0.1 0.048 13.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) EphA2_TM PF14575.6 ORF92675 - 0.051 14.5 0.1 0.055 14.3 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Peptidase_S49_N PF08496.10 ORF92675 - 0.082 13.0 0.1 0.091 12.8 0.1 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF2500 PF10694.9 ORF92675 - 0.099 13.2 0.3 0.11 13.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) PALP PF00291.25 ORF92657 - 7.4e-06 25.6 0.5 8.3e-06 25.4 0.5 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PK_C PF02887.16 ORF92618 - 4.9e-05 23.5 0.0 5.2e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Ion_trans PF00520.31 ORF91770 - 0.033 13.4 0.7 0.034 13.4 0.7 1.0 1 0 0 1 1 1 0 Ion transport protein MASE2 PF05230.11 ORF91540 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain L31 PF09784.9 ORF91159 - 0.042 14.3 0.2 0.048 14.1 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 DUF3927 PF13064.6 ORF91158 - 0.057 13.4 0.1 0.1 12.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) SKG6 PF08693.10 ORF91039 - 0.37 10.2 6.4 4.4 6.8 1.0 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain MASE2 PF05230.11 ORF90941 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain SOG2 PF10428.9 ORF90755 - 0.0036 16.6 0.4 0.0038 16.5 0.4 1.0 1 0 0 1 1 1 1 RAM signalling pathway protein DUF3516 PF12029.8 ORF90755 - 0.016 14.3 0.3 0.016 14.3 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3516) Gla PF00594.20 ORF90755 - 0.067 13.4 1.7 0.067 13.4 1.7 1.8 2 0 0 2 2 2 0 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain FAD_binding_9 PF08021.11 ORF90755 - 0.15 12.2 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain Excalibur PF05901.11 ORF90743 - 0.089 13.4 0.2 0.32 11.7 0.2 1.9 1 1 0 1 1 1 0 Excalibur calcium-binding domain Lar_restr_allev PF14354.6 ORF90550 - 0.098 13.1 4.8 0.12 12.7 4.8 1.2 1 0 0 1 1 1 0 Restriction alleviation protein Lar Pep1_7 PF17232.2 ORF90403 - 1.3 9.6 5.7 1.6 9.3 5.7 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 zf-C2H2_3 PF13878.6 ORF90339 - 0.00021 21.0 0.1 0.0003 20.5 0.1 1.2 1 0 0 1 1 1 1 zinc-finger of acetyl-transferase ESCO TFIIS_C PF01096.18 ORF90339 - 2.7 7.9 11.2 1.5 8.8 4.7 2.7 1 1 1 2 2 2 0 Transcription factor S-II (TFIIS) zf-Sec23_Sec24 PF04810.15 ORF90266 - 0.022 14.8 0.1 0.031 14.3 0.1 1.2 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger MASE2 PF05230.11 ORF90258 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain MASE2 PF05230.11 ORF89811 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain IRK_C PF17655.1 ORF89322 - 0.074 12.7 0.0 0.087 12.4 0.0 1.0 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain Pep1_7 PF17232.2 ORF89092 - 1.3 9.6 5.7 1.6 9.3 5.7 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 DUF5447 PF17525.2 ORF89005 - 0.043 14.3 0.2 0.045 14.2 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5447) DNAPolymera_Pol PF11590.8 ORF88997 - 0.09 12.7 0.1 0.47 10.4 0.0 1.9 2 0 0 2 2 2 0 DNA polymerase catalytic subunit Pol DUF5313 PF17240.2 ORF88943 - 0.2 12.1 0.6 0.22 12.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Asp4 PF16996.5 ORF88943 - 1.3 8.9 6.1 1.9 8.3 6.1 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ycf1 PF05758.12 ORF88943 - 3.1 5.6 7.5 3.1 5.5 7.5 1.0 1 0 0 1 1 1 0 Ycf1 GBR_NSP5 PF17580.2 ORF88931 - 0.018 14.9 0.7 0.02 14.7 0.7 1.0 1 0 0 1 1 1 0 Group B Rotavirus Non-structural protein 5 DUF1851 PF08906.11 ORF88931 - 0.13 12.2 0.0 0.24 11.4 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1851) NMT1 PF09084.11 ORF88847 - 0.13 12.2 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 NMT1/THI5 like MatE PF01554.18 ORF87763 - 1.2e-07 31.5 1.2 1.3e-07 31.4 1.2 1.0 1 0 0 1 1 1 1 MatE KASH PF10541.9 ORF87618 - 0.66 10.3 7.1 1.3 9.4 7.1 1.5 1 1 0 1 1 1 0 Nuclear envelope localisation domain Noelin-1 PF12308.8 ORF86704 - 0.0042 17.0 0.6 0.0052 16.7 0.6 1.1 1 0 0 1 1 1 1 Neurogenesis glycoprotein Bromodomain PF00439.25 ORF86610 - 3.6e-08 33.4 0.8 4.4e-08 33.1 0.8 1.1 1 0 0 1 1 1 1 Bromodomain zf_PR_Knuckle PF18445.1 ORF8655 - 0.24 11.2 0.4 0.34 10.8 0.4 1.2 1 0 0 1 1 1 0 PR zinc knuckle motif LCE6A PF15858.5 ORF8592 - 0.023 15.4 0.7 0.026 15.2 0.7 1.1 1 0 0 1 1 1 0 Late cornified envelope protein 6A family LysR_substrate PF03466.20 ORF85588 - 0.00083 18.8 0.0 0.0009 18.7 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Peptidase_S11 PF00768.20 ORF85574 - 2.4e-07 30.4 0.0 2.6e-07 30.3 0.0 1.0 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase TPR_9 PF13371.6 ORF85173 - 0.044 13.9 0.0 0.058 13.6 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Methyltransf_16 PF10294.9 ORF84783 - 7.4e-05 22.5 0.0 7.9e-05 22.5 0.0 1.0 1 0 0 1 1 1 1 Lysine methyltransferase Glyoxalase_5 PF14696.6 ORF84407 - 0.11 12.7 0.0 0.12 12.5 0.0 1.0 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Mem_trans PF03547.18 ORF84294 - 0.024 13.1 0.3 0.024 13.1 0.3 1.0 1 0 0 1 1 1 0 Membrane transport protein OAD_gamma PF04277.13 ORF83099 - 0.0049 17.4 0.1 0.0058 17.2 0.1 1.2 1 0 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain SieB PF14163.6 ORF83099 - 0.013 14.9 0.1 0.015 14.8 0.1 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B Protocadherin PF08374.11 ORF83099 - 0.038 14.0 0.3 0.038 14.0 0.3 1.0 1 0 0 1 1 1 0 Protocadherin DUF4446 PF14584.6 ORF83099 - 0.046 13.7 0.1 0.048 13.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) EphA2_TM PF14575.6 ORF83099 - 0.051 14.5 0.1 0.055 14.3 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Peptidase_S49_N PF08496.10 ORF83099 - 0.082 13.0 0.1 0.091 12.8 0.1 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF2500 PF10694.9 ORF83099 - 0.099 13.2 0.3 0.11 13.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) zf_PR_Knuckle PF18445.1 ORF83066 - 0.24 11.2 0.4 0.34 10.8 0.4 1.2 1 0 0 1 1 1 0 PR zinc knuckle motif DUF2628 PF10947.8 ORF83005 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Arc_PepC_II PF06847.11 ORF82923 - 0.065 13.8 0.1 0.076 13.5 0.1 1.2 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II DUF4577 PF15145.6 ORF82855 - 0.33 11.0 1.9 0.34 10.9 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) DUF4497 PF14924.6 ORF82331 - 0.073 13.5 0.2 0.081 13.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4497) SafA PF17073.5 ORF82175 - 0.03 14.3 0.0 0.036 14.0 0.0 1.1 1 0 0 1 1 1 0 Two-component-system connector protein Planc_extracel PF07595.12 ORF82156 - 3 7.8 14.4 3.9 7.4 0.3 3.4 3 0 0 3 3 3 0 Planctomycete extracellular DUF1353 PF07087.11 ORF82123 - 0.078 12.7 0.1 0.089 12.5 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1353) O-ag_pol_Wzy PF14296.6 ORF81819 - 0.67 8.5 8.8 0.77 8.3 8.8 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy Metallothio_PEC PF02068.16 ORF81793 - 0.0072 16.6 1.1 0.0072 16.6 1.1 1.4 1 1 0 1 1 1 1 Plant PEC family metallothionein AAA_26 PF13500.6 ORF81049 - 0.0019 18.1 0.1 0.002 18.0 0.1 1.0 1 0 0 1 1 1 1 AAA domain Fer4_10 PF13237.6 ORF80803 - 0.014 15.5 0.2 0.017 15.2 0.2 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF80803 - 0.042 14.4 0.2 0.053 14.0 0.2 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain DTC PF18102.1 ORF80343 - 0.14 12.3 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Deltex C-terminal domain XRN1_DBM PF18245.1 ORF8029 - 0.13 12.2 0.2 0.25 11.3 0.2 1.5 1 0 0 1 1 1 0 5-3 exonuclease XRN1 DCP1-binding motif Tup_N PF08581.10 ORF80238 - 0.01 16.2 0.8 0.015 15.6 0.8 1.3 1 0 0 1 1 1 1 Tup N-terminal Mei5 PF10376.9 ORF80238 - 0.011 15.7 2.1 0.012 15.5 2.1 1.0 1 0 0 1 1 1 0 Double-strand recombination repair protein HisKA_3 PF07730.13 ORF80238 - 0.02 15.4 0.7 0.024 15.2 0.7 1.1 1 0 0 1 1 1 0 Histidine kinase PKcGMP_CC PF16808.5 ORF80238 - 0.072 12.9 3.7 0.12 12.3 3.7 1.3 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase E3_UbLigase_EDD PF11547.8 ORF80235 - 0.13 12.0 0.5 0.21 11.3 0.0 1.5 2 0 0 2 2 2 0 E3 ubiquitin ligase EDD SPK PF04435.18 ORF80146 - 0.024 15.1 0.4 0.026 14.9 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF545) DUF1548 PF07579.11 ORF80146 - 0.032 14.6 0.2 0.052 13.9 0.1 1.2 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1548) pP_pnuc_1 PF18165.1 ORF79662 - 0.066 13.1 0.0 0.36 10.7 0.0 1.9 1 1 0 1 1 1 0 Predicted pPIWI-associating nuclease DUF2628 PF10947.8 ORF79549 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) zf-AN1 PF01428.16 ORF78621 - 0.017 15.3 0.8 0.028 14.6 0.8 1.4 1 0 0 1 1 1 0 AN1-like Zinc finger Pep1_7 PF17232.2 ORF78510 - 1.3 9.6 5.7 1.6 9.3 5.7 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 MORN PF02493.20 ORF78477 - 1.2e-14 53.2 10.8 3.3e-06 26.7 2.7 3.1 3 0 0 3 3 3 3 MORN repeat V_ATPase_I PF01496.19 ORF78367 - 0.13 10.2 2.1 0.14 10.1 2.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family GNAT_C PF18164.1 ORF78350 - 0.14 11.8 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 GNAT-like C-terminal domain Actin PF00022.19 ORF78010 - 1.1e-25 90.1 0.0 1.2e-25 90.0 0.0 1.0 1 0 0 1 1 1 1 Actin T4BSS_DotH_IcmK PF12293.8 ORF77984 - 0.023 14.0 0.0 0.025 13.8 0.0 1.0 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion Thioredoxin PF00085.20 ORF77854 - 3.4e-05 23.8 0.0 3.7e-05 23.6 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin ERp29_N PF07912.13 ORF77854 - 0.0075 16.4 0.0 0.0076 16.4 0.0 1.1 1 0 0 1 1 1 1 ERp29, N-terminal domain Thioredoxin_6 PF13848.6 ORF77854 - 0.019 14.9 0.0 0.021 14.7 0.0 1.0 1 0 0 1 1 1 0 Thioredoxin-like domain DUF2628 PF10947.8 ORF77784 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) DUF3937 PF13073.6 ORF76600 - 0.0016 18.5 0.2 0.0021 18.1 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3937) Tetraspanin PF00335.20 ORF76600 - 0.075 12.7 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Tetraspanin family COX2-transmemb PF09125.10 ORF76600 - 0.55 10.1 2.9 0.85 9.5 2.6 1.5 1 1 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane SAUGI PF06106.11 ORF76269 - 0.13 12.8 1.0 0.14 12.7 1.0 1.1 1 0 0 1 1 1 0 S. aureus uracil DNA glycosylase inhibitor MASE2 PF05230.11 ORF76165 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain TubC_N PF18563.1 ORF76083 - 0.051 13.6 0.4 0.069 13.1 0.4 1.2 1 0 0 1 1 1 0 TubC N-terminal docking domain Lipoprotein_3 PF00938.17 ORF76083 - 0.053 13.7 0.1 0.059 13.6 0.1 1.2 1 0 0 1 1 1 0 Lipoprotein OHA PF14418.6 ORF75806 - 0.099 12.5 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 OST-HTH Associated domain DUF1240 PF06836.12 ORF74873 - 0.22 12.1 0.1 0.32 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1240) MtN3_slv PF03083.16 ORF74764 - 0.16 12.0 2.4 0.2 11.7 2.4 1.2 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange Peptidase_M24 PF00557.24 ORF74273 - 2.8e-06 27.2 0.1 3.7e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Med3 PF11593.8 ORF74202 - 1.7 7.8 4.0 1.9 7.6 4.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Tlr3_TMD PF17968.1 ORF7397 - 1 9.6 6.3 0.86 9.8 0.5 2.5 1 1 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain Sec62 PF03839.16 ORF7397 - 1.4 8.3 5.4 1.6 8.2 5.4 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 WD40 PF00400.32 ORF73522 - 6.7e-06 26.7 0.0 1e-05 26.2 0.0 1.3 1 0 0 1 1 1 1 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF73522 - 0.021 13.8 0.0 0.021 13.8 0.0 1.0 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40 PF00400.32 ORF73521 - 0.00014 22.5 0.7 0.34 11.8 0.3 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat Pep1_7 PF17232.2 ORF73162 - 1.3 9.6 5.7 1.6 9.3 5.7 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 DUF3959 PF13105.6 ORF73083 - 0.15 11.6 0.3 0.17 11.4 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) MNNL PF07657.13 ORF72839 - 0.021 14.9 1.9 0.028 14.4 1.9 1.2 1 0 0 1 1 1 0 N terminus of Notch ligand DUF2628 PF10947.8 ORF72669 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) V-set_CD47 PF08204.11 ORF71833 - 0.017 15.1 1.2 0.02 14.9 1.2 1.1 1 0 0 1 1 1 0 CD47 immunoglobulin-like domain MAF_flag10 PF01973.18 ORF71833 - 0.036 13.8 0.1 0.037 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF115 DUF5313 PF17240.2 ORF71460 - 0.2 12.1 0.6 0.22 12.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Asp4 PF16996.5 ORF71460 - 1.3 8.9 6.1 1.9 8.3 6.1 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ycf1 PF05758.12 ORF71460 - 3.1 5.6 7.5 3.1 5.5 7.5 1.0 1 0 0 1 1 1 0 Ycf1 DUF2208 PF09973.9 ORF71239 - 0.042 13.5 2.2 0.046 13.3 2.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) E6 PF00518.17 ORF70961 - 0.08 13.4 0.0 0.085 13.3 0.0 1.0 1 0 0 1 1 1 0 Early Protein (E6) zf-Tim10_DDP PF02953.15 ORF7077 - 0.062 13.0 0.1 0.28 10.9 0.0 1.8 2 0 0 2 2 2 0 Tim10/DDP family zinc finger KIAA1430 PF13879.6 ORF70676 - 1e-10 42.2 1.5 1.1e-10 42.1 1.5 1.0 1 0 0 1 1 1 1 KIAA1430 homologue IKKbetaNEMObind PF12179.8 ORF70676 - 0.05 13.6 0.0 4.3 7.5 0.0 2.4 2 0 0 2 2 2 0 I-kappa-kinase-beta NEMO binding domain Pkinase PF00069.25 ORF7035 - 6.7e-09 35.5 0.0 7.1e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 ORF7035 - 0.004 16.8 0.0 0.004 16.8 0.0 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_Tyr PF07714.17 ORF7035 - 0.096 11.9 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase Pkinase PF00069.25 ORF70335 - 6.7e-09 35.5 0.0 7.1e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 ORF70335 - 0.004 16.8 0.0 0.004 16.8 0.0 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_Tyr PF07714.17 ORF70335 - 0.096 11.9 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase CAAX_1 PF15895.5 ORF69850 - 0.21 11.5 5.7 0.23 11.3 5.7 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 G6PD_C PF02781.16 ORF69427 - 1.7e-15 57.0 0.3 1.9e-15 56.8 0.3 1.0 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain HSNSD PF12062.8 ORF69266 - 0.023 13.4 0.3 0.023 13.4 0.3 1.0 1 0 0 1 1 1 0 heparan sulfate-N-deacetylase ASFV_p27 PF06556.11 ORF6920 - 0.11 12.6 0.5 0.11 12.6 0.5 1.1 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus DUF1211 PF06736.11 ORF6920 - 0.12 12.8 2.3 0.13 12.7 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) DUF4167 PF13763.6 ORF69083 - 0.002 18.2 0.2 0.0022 18.1 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4167) AC_N PF16214.5 ORF68896 - 0.17 11.0 0.5 0.19 10.8 0.5 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region pPIWI_RE_Z PF18155.1 ORF68360 - 0.075 12.9 0.3 0.084 12.7 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z DASH_Spc19 PF08287.11 ORF68306 - 0.039 13.9 1.5 0.046 13.6 1.5 1.1 1 0 0 1 1 1 0 Spc19 Pkinase PF00069.25 ORF67984 - 6.7e-09 35.5 0.0 7.1e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 ORF67984 - 0.004 16.8 0.0 0.004 16.8 0.0 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_Tyr PF07714.17 ORF67984 - 0.096 11.9 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase DUF4416 PF14385.6 ORF67570 - 0.0094 15.9 0.0 0.01 15.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4416) UPF0231 PF06062.11 ORF67570 - 0.093 13.0 0.1 0.14 12.4 0.1 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0231) IBV_3A PF03617.13 ORF67342 - 0.067 13.2 0.0 0.08 12.9 0.0 1.2 1 0 0 1 1 1 0 IBV 3A protein DUF1987 PF09345.10 ORF67342 - 0.12 12.1 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) CBM_20 PF00686.19 ORF67314 - 0.043 13.7 0.0 0.049 13.5 0.0 1.1 1 0 0 1 1 1 0 Starch binding domain Nodulin_late PF07127.11 ORF67288 - 0.039 14.3 1.4 0.058 13.7 1.4 1.3 1 0 0 1 1 1 0 Late nodulin protein IRK_C PF17655.1 ORF66964 - 0.074 12.7 0.0 0.087 12.4 0.0 1.0 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain NAD-GH PF10712.9 ORF66927 - 0.00046 18.8 0.0 0.00055 18.5 0.0 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase DUF3281 PF11685.8 ORF6665 - 0.12 11.7 0.9 0.12 11.7 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3281) Cytidylate_kin PF02224.18 ORF66560 - 0.024 14.4 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Cytidylate kinase Lipin_N PF04571.14 ORF66481 - 0.036 14.0 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 lipin, N-terminal conserved region TPP_enzyme_N PF02776.18 ORF66481 - 0.041 13.5 0.5 0.044 13.4 0.5 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Med19 PF10278.9 ORF66406 - 1.3 8.9 13.4 1.4 8.8 13.4 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Cadherin_tail PF15974.5 ORF66406 - 1.4 9.3 8.3 1.4 9.2 8.3 1.1 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region MASE2 PF05230.11 ORF65692 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain DUF2527 PF10736.9 ORF65617 - 0.66 9.8 0.1 0.66 9.8 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) SAUGI PF06106.11 ORF65409 - 0.13 12.8 1.0 0.14 12.7 1.0 1.1 1 0 0 1 1 1 0 S. aureus uracil DNA glycosylase inhibitor L31 PF09784.9 ORF65298 - 0.042 14.3 0.2 0.048 14.1 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 DUF3927 PF13064.6 ORF65297 - 0.057 13.4 0.1 0.1 12.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) Imm58 PF15581.6 ORF65145 - 6.6 6.9 5.4 2.6 8.2 3.2 1.5 1 1 0 1 1 1 0 Immunity protein 58 Phage_lambda_P PF06992.11 ORF64666 - 0.33 10.7 3.7 0.33 10.7 3.7 1.0 1 0 0 1 1 1 0 Replication protein P DUF5423 PF17461.2 ORF64402 - 7 5.4 6.8 8.4 5.1 6.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) zf-NF-X1 PF01422.17 ORF63599 - 3.8 7.7 7.2 18 5.5 1.1 2.4 2 1 0 2 2 2 0 NF-X1 type zinc finger Gln-synt_C PF00120.24 ORF63527 - 0.045 12.8 0.1 0.046 12.7 0.1 1.0 1 0 0 1 1 1 0 Glutamine synthetase, catalytic domain C2 PF00168.30 ORF63305 - 4.3e-10 39.8 0.0 4.5e-10 39.7 0.0 1.0 1 0 0 1 1 1 1 C2 domain Histone_HNS PF00816.21 ORF63305 - 0.091 13.6 0.1 0.1 13.4 0.1 1.1 1 0 0 1 1 1 0 H-NS histone family Auxin_inducible PF02519.14 ORF63016 - 0.009 16.2 0.1 0.01 16.0 0.1 1.2 1 1 0 1 1 1 1 Auxin responsive protein COX17 PF05051.13 ORF63004 - 9.5e-20 70.7 7.7 1.2e-19 70.3 7.7 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase copper chaperone (COX17) SPC12 PF06645.13 ORF62608 - 0.37 10.9 4.7 0.15 12.2 2.4 1.5 1 1 1 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Laminin_EGF PF00053.24 ORF62597 - 0.04 14.0 1.2 0.06 13.5 1.2 1.2 1 0 0 1 1 1 0 Laminin EGF domain Nop52 PF05997.12 ORF62597 - 0.17 11.7 0.0 0.17 11.7 0.0 1.0 1 0 0 1 1 1 0 Nucleolar protein,Nop52 Dicty_CTDC PF00526.18 ORF62027 - 0.15 12.0 0.5 0.28 11.1 0.5 1.3 1 0 0 1 1 1 0 Dictyostelium (slime mold) repeat KASH PF10541.9 ORF61696 - 0.66 10.3 7.1 1.3 9.4 7.1 1.5 1 1 0 1 1 1 0 Nuclear envelope localisation domain TPR_9 PF13371.6 ORF61395 - 0.044 13.9 0.0 0.058 13.6 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat KNTase_C PF07827.11 ORF61101 - 0.035 13.9 0.1 0.04 13.7 0.1 1.0 1 0 0 1 1 1 0 KNTase C-terminal domain Maelstrom PF13017.6 ORF61101 - 0.058 13.0 0.6 0.057 13.1 0.6 1.0 1 0 0 1 1 1 0 piRNA pathway germ-plasm component Thioredoxin PF00085.20 ORF60876 - 0.02 14.9 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin T4BSS_DotH_IcmK PF12293.8 ORF60566 - 0.023 14.0 0.0 0.025 13.8 0.0 1.0 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion CLLAC PF15675.5 ORF60366 - 0.51 9.9 4.2 0.79 9.3 4.2 1.3 1 0 0 1 1 1 0 CLLAC-motif containing domain Cys_rich_CWC PF14375.6 ORF60173 - 0.054 13.9 0.7 0.071 13.5 0.7 1.4 1 1 0 1 1 1 0 Cysteine-rich CWC Kelch_1 PF01344.25 ORF59823 - 5.1e-06 26.0 0.0 4.8e-05 22.8 0.0 2.0 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 ORF59823 - 8.2e-06 25.9 0.0 0.0056 16.9 0.0 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF59823 - 7.2e-05 22.7 0.1 0.21 11.6 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF59823 - 0.019 15.0 0.0 1.4 9.0 0.1 2.1 2 0 0 2 2 2 0 Kelch motif Kelch_3 PF13415.6 ORF59823 - 0.14 12.5 0.0 0.24 11.8 0.0 1.5 2 0 0 2 2 2 0 Galactose oxidase, central domain DUF5101 PF17031.5 ORF59704 - 0.024 14.7 1.5 0.026 14.6 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) BofA PF07441.11 ORF59589 - 0.073 13.3 0.4 0.074 13.3 0.4 1.2 1 0 0 1 1 1 0 SigmaK-factor processing regulatory protein BofA Pep1_7 PF17232.2 ORF59233 - 1.3 9.6 5.7 1.6 9.3 5.7 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 DUF2883 PF11097.8 ORF59185 - 0.0083 16.2 0.0 0.0094 16.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2883) Ntox10 PF15520.6 ORF58914 - 0.08 12.8 0.1 0.08 12.8 0.1 1.1 1 0 0 1 1 1 0 Novel toxin 10 TFIIIC_sub6 PF10419.9 ORF57722 - 0.09 12.7 0.0 0.09 12.7 0.0 1.2 1 0 0 1 1 1 0 TFIIIC subunit triple barrel domain Med16 PF11635.8 ORF57688 - 0.091 10.7 0.1 0.1 10.5 0.1 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 Mad3_BUB1_I PF08311.12 ORF57210 - 0.0079 16.2 0.1 0.0084 16.1 0.1 1.1 1 0 0 1 1 1 1 Mad3/BUB1 homology region 1 TMEM61 PF15105.6 ORF57113 - 0.22 11.3 1.0 0.25 11.2 1.0 1.1 1 0 0 1 1 1 0 TMEM61 protein family Citrate_bind PF16114.5 ORF57019 - 0.18 11.3 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 ATP citrate lyase citrate-binding DUF5325 PF17259.2 ORF56738 - 0.015 15.2 0.4 0.019 14.8 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5325) EKLF_TAD1 PF16832.5 ORF56685 - 0.29 11.0 2.9 0.56 10.1 2.9 1.5 1 0 0 1 1 1 0 Erythroid krueppel-like transcription factor, transactivation 1 Fucose_iso_C PF02952.17 ORF56678 - 0.085 12.6 0.0 0.098 12.4 0.0 1.0 1 0 0 1 1 1 0 L-fucose isomerase, C-terminal domain TPK_catalytic PF04263.16 ORF56643 - 0.042 13.9 0.3 0.048 13.7 0.3 1.1 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain DSHCT PF08148.12 ORF56545 - 4.1e-13 49.3 0.1 4.4e-13 49.2 0.1 1.0 1 0 0 1 1 1 1 DSHCT (NUC185) domain CPBP PF02517.16 ORF55814 - 0.00014 22.2 1.0 0.00016 21.9 1.0 1.1 1 0 0 1 1 1 1 CPBP intramembrane metalloprotease NdhL PF10716.9 ORF55814 - 0.034 14.1 4.0 0.039 13.9 4.0 1.1 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit E2F_TDP PF02319.20 ORF55493 - 0.078 13.0 0.2 0.078 13.0 0.2 1.3 1 1 0 1 1 1 0 E2F/DP family winged-helix DNA-binding domain RecO_C PF02565.15 ORF55414 - 0.021 14.7 0.3 0.023 14.5 0.3 1.0 1 0 0 1 1 1 0 Recombination protein O C terminal ComS PF17584.2 ORF55355 - 0.0047 16.4 0.2 0.0057 16.1 0.2 1.1 1 0 0 1 1 1 1 Bacillus competence protein S MatE PF01554.18 ORF55150 - 1.2e-07 31.5 1.2 1.3e-07 31.4 1.2 1.0 1 0 0 1 1 1 1 MatE SNF PF00209.18 ORF55116 - 1.2e-05 24.3 1.0 1.2e-05 24.2 1.0 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF1947 PF09183.10 ORF55014 - 0.058 13.7 1.6 0.068 13.5 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1947) XRN1_DBM PF18245.1 ORF54738 - 0.13 12.2 0.2 0.25 11.3 0.2 1.5 1 0 0 1 1 1 0 5-3 exonuclease XRN1 DCP1-binding motif DUF629 PF04780.12 ORF54613 - 0.23 9.9 0.1 0.24 9.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) T_cell_tran_alt PF15128.6 ORF54599 - 0.082 12.7 0.2 0.089 12.6 0.2 1.1 1 0 0 1 1 1 0 T-cell leukemia translocation-altered TT_ORF1 PF02956.14 ORF54589 - 3.6 6.1 8.4 4.1 6.0 8.4 1.0 1 0 0 1 1 1 0 TT viral orf 1 T4BSS_DotH_IcmK PF12293.8 ORF54192 - 0.023 14.0 0.0 0.025 13.8 0.0 1.0 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion DUF2628 PF10947.8 ORF54162 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) HHH_6 PF14579.6 ORF54066 - 0.013 15.7 0.0 0.014 15.6 0.0 1.0 1 0 0 1 1 1 0 Helix-hairpin-helix motif PepSY_TM PF03929.16 ORF54041 - 0.045 13.4 0.2 0.047 13.4 0.2 1.1 1 0 0 1 1 1 0 PepSY-associated TM region Barstar PF01337.18 ORF5395 - 0.16 12.0 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Barstar (barnase inhibitor) TAXi_C PF14541.6 ORF53185 - 3.5e-07 30.1 0.0 3.6e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF53185 - 0.00044 19.8 0.0 0.00045 19.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease LHC PF00556.20 ORF52992 - 0.22 11.7 0.7 0.34 11.2 0.7 1.3 1 0 0 1 1 1 0 Antenna complex alpha/beta subunit R3H PF01424.22 ORF52939 - 0.0054 16.7 0.0 0.0069 16.4 0.0 1.2 1 0 0 1 1 1 1 R3H domain DUF2628 PF10947.8 ORF52915 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) SVA PF05326.11 ORF52382 - 0.0074 16.3 0.9 0.0076 16.2 0.9 1.0 1 0 0 1 1 1 1 Seminal vesicle autoantigen (SVA) SKG6 PF08693.10 ORF52199 - 0.37 10.2 6.4 4.4 6.8 1.0 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain TPR_2 PF07719.17 ORF52179 - 0.018 15.1 0.3 0.026 14.6 0.3 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat SAUGI PF06106.11 ORF519 - 0.13 12.8 1.0 0.14 12.7 1.0 1.1 1 0 0 1 1 1 0 S. aureus uracil DNA glycosylase inhibitor KTI12 PF08433.10 ORF51624 - 5.3e-07 29.4 0.1 5.3e-07 29.4 0.1 1.1 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Phage_tail_L PF05100.12 ORF51624 - 0.026 13.9 0.0 0.026 13.8 0.0 1.0 1 0 0 1 1 1 0 Phage minor tail protein L Endopep_inhib PF16800.5 ORF51624 - 0.045 13.7 0.1 0.052 13.5 0.1 1.0 1 0 0 1 1 1 0 IseA DL-endopeptidase inhibitor DUF4822 PF16103.5 ORF51624 - 0.074 13.3 0.1 0.082 13.2 0.1 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4822) DUF3169 PF11368.8 ORF51624 - 0.096 12.2 0.2 0.096 12.2 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) DUF1955 PF09205.10 ORF51526 - 0.17 11.6 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) Alpha_GJ PF03229.13 ORF50769 - 0.028 15.0 0.8 0.032 14.8 0.8 1.2 1 0 0 1 1 1 0 Alphavirus glycoprotein J MASE2 PF05230.11 ORF50470 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain W2 PF02020.18 ORF50273 - 0.21 11.8 0.0 0.22 11.7 0.0 1.1 1 0 0 1 1 1 0 eIF4-gamma/eIF5/eIF2-epsilon pPIWI_RE_Z PF18155.1 ORF50135 - 0.075 12.9 0.3 0.084 12.7 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z Mito_carr PF00153.27 ORF49727 - 3.3e-06 26.9 0.2 4.2e-06 26.6 0.2 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein YfhO PF09586.10 ORF49727 - 0.026 12.8 0.2 0.027 12.7 0.2 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Orthopox_B11R PF07033.11 ORF49620 - 0.1 12.4 0.3 0.15 11.8 0.3 1.3 1 0 0 1 1 1 0 Orthopoxvirus B11R protein Proteasome PF00227.26 ORF48952 - 1.1e-09 38.0 0.0 1.1e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit CD24 PF14984.6 ORF48605 - 0.021 15.1 1.8 2.6 8.3 0.2 2.2 2 0 0 2 2 2 0 CD24 protein FTH PF01827.27 ORF48330 - 0.055 13.3 0.0 0.055 13.3 0.0 1.0 1 0 0 1 1 1 0 FTH domain DUF1415 PF07209.12 ORF48234 - 0.061 13.1 0.1 0.064 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1415) DUF4477 PF14780.6 ORF47912 - 0.03 13.9 0.6 0.031 13.9 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) GldH_lipo PF14109.6 ORF47869 - 0.029 15.1 0.2 0.032 15.0 0.2 1.0 1 0 0 1 1 1 0 GldH lipoprotein PDH PF02153.17 ORF47828 - 0.041 12.9 0.0 0.046 12.7 0.0 1.0 1 0 0 1 1 1 0 Prephenate dehydrogenase Ubiq-Cytc-red_N PF09165.10 ORF47820 - 0.16 12.9 1.3 0.16 12.9 1.3 1.6 2 0 0 2 2 2 0 Ubiquinol-cytochrome c reductase 8 kDa, N-terminal DUF4834 PF16118.5 ORF47653 - 0.049 14.6 0.7 0.064 14.2 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF1924 PF09086.11 ORF47639 - 0.15 12.4 1.8 0.16 12.3 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1924) ocr PF08684.10 ORF47526 - 0.03 14.8 0.0 0.032 14.7 0.0 1.1 1 0 0 1 1 1 0 DNA mimic ocr zf-C2H2_3 PF13878.6 ORF47365 - 0.00021 21.0 0.1 0.0003 20.5 0.1 1.2 1 0 0 1 1 1 1 zinc-finger of acetyl-transferase ESCO TFIIS_C PF01096.18 ORF47365 - 2.7 7.9 11.2 1.5 8.8 4.7 2.7 1 1 1 2 2 2 0 Transcription factor S-II (TFIIS) Herpes_capsid PF06112.11 ORF47073 - 0.063 13.4 0.7 0.068 13.2 0.7 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Rtf2 PF04641.12 ORF46957 - 0.013 14.8 12.1 0.014 14.8 12.1 1.0 1 0 0 1 1 1 0 Rtf2 RING-finger MATalpha_HMGbox PF04769.12 ORF46957 - 0.31 10.3 8.4 0.36 10.1 8.4 1.0 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box Cys_Knot_tox PF17486.2 ORF46496 - 0.12 12.6 0.1 0.13 12.5 0.1 1.1 1 0 0 1 1 1 0 Cystine knot toxins DUF5101 PF17031.5 ORF46460 - 0.024 14.7 1.5 0.026 14.6 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) COX17 PF05051.13 ORF46448 - 9.5e-20 70.7 7.7 1.2e-19 70.3 7.7 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase copper chaperone (COX17) DUF2615 PF11027.8 ORF46017 - 0.24 11.5 0.0 0.26 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) Hep_core_N PF08290.11 ORF45871 - 0.057 13.4 1.7 0.088 12.8 1.7 1.2 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger Med3 PF11593.8 ORF45745 - 1.7 7.8 4.0 1.9 7.6 4.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks400.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks400.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks400.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks400.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YibE_F PF07907.11 ORF45284 - 0.52 9.8 8.1 0.54 9.7 8.1 1.0 1 0 0 1 1 1 0 YibE/F-like protein DUF2070 PF09843.9 ORF45284 - 1.5 7.0 7.3 1.6 6.9 7.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Polysacc_synt_C PF14667.6 ORF4515 - 0.013 15.6 0.3 0.015 15.4 0.3 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain BofA PF07441.11 ORF44961 - 0.073 13.3 0.4 0.074 13.3 0.4 1.2 1 0 0 1 1 1 0 SigmaK-factor processing regulatory protein BofA DUF2671 PF10877.8 ORF44860 - 0.03 14.1 0.3 0.033 14.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) DUF5362 PF17319.2 ORF44860 - 0.071 13.0 2.3 0.081 12.8 2.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5362) Aa_trans PF01490.18 ORF44462 - 9e-06 24.6 1.7 9.8e-06 24.5 1.7 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein L6_membrane PF05805.12 ORF44462 - 0.041 13.5 0.7 0.046 13.3 0.7 1.0 1 0 0 1 1 1 0 L6 membrane protein DUF2628 PF10947.8 ORF44443 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) BaxI_1 PF12811.7 ORF44152 - 0.14 11.7 2.7 0.14 11.7 2.7 1.1 1 0 0 1 1 1 0 Bax inhibitor 1 like MPS-4 PF17523.2 ORF44152 - 1.1 9.4 8.8 1.3 9.1 8.8 1.1 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Ribonuclease_T2 PF00445.18 ORF43988 - 0.13 12.5 0.1 0.13 12.5 0.1 1.1 1 0 0 1 1 1 0 Ribonuclease T2 family DUF2628 PF10947.8 ORF43798 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) DUF3270 PF11674.8 ORF43675 - 2.7 8.3 6.6 3.4 7.9 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) HTH_Tnp_Tc3_1 PF11427.8 ORF43354 - 0.0076 16.1 0.5 0.011 15.6 0.5 1.3 1 0 0 1 1 1 1 Tc3 transposase MASE2 PF05230.11 ORF43299 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain Zn-ribbon_8 PF09723.10 ORF42882 - 1.7 8.8 0.1 1.7 8.8 0.1 2.6 2 1 1 3 3 3 0 Zinc ribbon domain DUF4251 PF14059.6 ORF42633 - 0.045 13.7 0.5 0.05 13.6 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4251) TIP49_C PF17856.1 ORF4244 - 0.11 12.7 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 TIP49 AAA-lid domain DUF3932 PF13068.6 ORF4226 - 0.15 12.4 4.5 0.55 10.5 4.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3932) Dehydratase_MU PF02288.15 ORF41986 - 0.009 15.9 0.0 0.0093 15.8 0.0 1.0 1 0 0 1 1 1 1 Dehydratase medium subunit AXIN1_TNKS_BD PF16646.5 ORF41986 - 0.023 15.6 0.1 0.025 15.5 0.1 1.1 1 0 0 1 1 1 0 Axin-1 tankyrase binding domain GldH_lipo PF14109.6 ORF41777 - 0.029 15.1 0.2 0.032 15.0 0.2 1.0 1 0 0 1 1 1 0 GldH lipoprotein DUF5010_C PF18099.1 ORF41484 - 0.2 11.8 0.0 0.23 11.6 0.0 1.1 1 0 0 1 1 1 0 DUF5010 C-terminal domain MTTB PF06253.11 ORF40984 - 0.027 12.5 0.0 0.028 12.4 0.0 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) MscS_TM PF12794.7 ORF40782 - 0.1 11.4 0.8 0.11 11.3 0.8 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Tlr3_TMD PF17968.1 ORF40397 - 1 9.6 6.3 0.86 9.8 0.5 2.5 1 1 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain Sec62 PF03839.16 ORF40397 - 1.4 8.3 5.4 1.6 8.2 5.4 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 TF_Otx PF03529.13 ORF40355 - 0.026 14.9 0.2 0.029 14.7 0.2 1.1 1 0 0 1 1 1 0 Otx1 transcription factor DFP PF04127.15 ORF39921 - 2.9e-08 33.8 0.0 3e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein adh_short_C2 PF13561.6 ORF39893 - 4.6e-10 39.4 0.0 4.9e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Pep1_7 PF17232.2 ORF3985 - 1.3 9.6 5.7 1.6 9.3 5.7 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 TAXi_C PF14541.6 ORF39736 - 3.5e-07 30.1 0.0 3.6e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF39736 - 0.00044 19.8 0.0 0.00045 19.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF3270 PF11674.8 ORF39725 - 2.7 8.3 6.6 3.4 7.9 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) zf-U1 PF06220.12 ORF39572 - 0.16 11.8 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 U1 zinc finger ECSCR PF15820.5 ORF39439 - 0.069 13.0 0.0 0.07 13.0 0.0 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF4611 PF15387.6 ORF39293 - 0.37 11.0 9.6 0.4 10.9 9.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) SOG2 PF10428.9 ORF39196 - 0.0036 16.6 0.4 0.0038 16.5 0.4 1.0 1 0 0 1 1 1 1 RAM signalling pathway protein DUF3516 PF12029.8 ORF39196 - 0.016 14.3 0.3 0.016 14.3 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3516) Gla PF00594.20 ORF39196 - 0.067 13.4 1.7 0.067 13.4 1.7 1.8 2 0 0 2 2 2 0 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain FAD_binding_9 PF08021.11 ORF39196 - 0.15 12.2 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain F-box PF00646.33 ORF39126 - 0.082 12.8 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 F-box domain DUF898 PF05987.13 ORF39119 - 0.039 13.0 1.9 0.036 13.1 1.9 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) Pkinase PF00069.25 ORF39047 - 2.5e-16 59.8 0.2 2.7e-16 59.8 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39047 - 3.4e-12 46.2 0.1 3.5e-12 46.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF39047 - 0.00045 19.6 0.0 0.00047 19.6 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family TIC20 PF16166.5 ORF38567 - 0.088 12.6 0.0 0.089 12.6 0.0 1.0 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like C1_1 PF00130.22 ORF38121 - 0.062 13.2 1.3 0.062 13.2 1.3 2.3 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) IMP2_C PF18591.1 ORF37914 - 0.043 13.7 0.1 0.06 13.2 0.1 1.2 1 0 0 1 1 1 0 Immune Mapped Protein 2 (IMP2) C-terminal domain DUF4210 PF13915.6 ORF37474 - 0.039 14.5 0.0 0.057 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) MORN PF02493.20 ORF37397 - 1.2e-11 43.8 12.3 2.4e-05 24.0 1.8 3.1 3 0 0 3 3 3 3 MORN repeat Pep1_7 PF17232.2 ORF36901 - 1.3 9.6 5.7 1.6 9.3 5.7 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 Oleosin PF01277.17 ORF36871 - 0.1 12.4 4.0 0.14 11.9 4.0 1.2 1 0 0 1 1 1 0 Oleosin DCAF15_WD40 PF14939.6 ORF3681 - 0.082 12.5 0.0 0.094 12.4 0.0 1.0 1 0 0 1 1 1 0 DDB1-and CUL4-substrate receptor 15, WD repeat RNA_pol_L PF01193.24 ORF36529 - 0.0085 15.5 0.0 0.012 15.1 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain YaiA PF16362.5 ORF36488 - 5.2e-40 135.3 4.3 5.7e-40 135.2 4.3 1.0 1 0 0 1 1 1 1 YaiA protein MTTB PF06253.11 ORF36347 - 0.027 12.5 0.0 0.028 12.4 0.0 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) DUF1229 PF06797.11 ORF36139 - 0.1 12.8 0.0 0.11 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1229) Kinesin PF00225.23 ORF35764 - 0.11 11.4 0.1 0.12 11.3 0.1 1.0 1 0 0 1 1 1 0 Kinesin motor domain Blo-t-5 PF11642.8 ORF35697 - 0.068 13.1 0.1 0.075 13.0 0.1 1.1 1 0 0 1 1 1 0 Mite allergen Blo t 5 Pkinase PF00069.25 ORF35600 - 1.2e-08 34.6 0.0 1.2e-08 34.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF35600 - 0.017 14.4 0.0 0.017 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase TFIIS_M PF07500.14 ORF35600 - 0.053 14.0 0.0 0.062 13.8 0.0 1.1 1 0 0 1 1 1 0 Transcription factor S-II (TFIIS), central domain Kinase-like PF14531.6 ORF35600 - 0.076 12.3 0.0 0.076 12.3 0.0 1.1 1 0 0 1 1 1 0 Kinase-like ADH_zinc_N_2 PF13602.6 ORF3543 - 0.015 16.4 0.0 0.015 16.4 0.0 1.1 1 0 0 1 1 1 0 Zinc-binding dehydrogenase ZF-HD_dimer PF04770.12 ORF35429 - 0.012 15.9 0.4 0.016 15.5 0.4 1.2 1 0 0 1 1 1 0 ZF-HD protein dimerisation region DUF995 PF06191.12 ORF35133 - 0.024 14.3 1.6 0.026 14.2 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF995) GerE PF00196.19 ORF35015 - 0.078 12.5 0.1 0.096 12.3 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family UPF0016 PF01169.19 ORF34404 - 1.5e-08 34.8 0.5 1.9e-08 34.5 0.5 1.2 1 0 0 1 1 1 1 Uncharacterized protein family UPF0016 DUF2628 PF10947.8 ORF34188 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) TcpE PF12648.7 ORF33822 - 0.48 11.0 11.7 0.5 10.9 11.7 1.0 1 0 0 1 1 1 0 TcpE family VP7 PF00434.18 ORF33822 - 2.4 7.2 10.8 2.4 7.2 10.8 1.1 1 0 0 1 1 1 0 Glycoprotein VP7 Jak1_Phl PF17887.1 ORF33650 - 0.056 13.4 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain Cyanate_lyase PF02560.14 ORF33168 - 2.6e-29 100.9 0.0 2.8e-29 100.8 0.0 1.0 1 0 0 1 1 1 1 Cyanate lyase C-terminal domain TMEM71 PF15121.6 ORF33003 - 0.12 12.0 0.6 0.13 11.9 0.6 1.1 1 0 0 1 1 1 0 TMEM71 protein family PA_decarbox PF05870.11 ORF32772 - 0.23 11.0 0.0 0.29 10.8 0.0 1.0 1 0 0 1 1 1 0 Phenolic acid decarboxylase (PAD) TOBE PF03459.17 ORF32770 - 0.051 13.9 0.0 0.069 13.4 0.0 1.2 1 0 0 1 1 1 0 TOBE domain Fungus-induced PF10917.8 ORF32437 - 0.12 12.7 0.3 0.16 12.3 0.3 1.2 1 0 0 1 1 1 0 Fungus-induced protein HELP PF03451.14 ORF32212 - 8.1e-17 60.8 0.1 9.1e-17 60.7 0.1 1.0 1 0 0 1 1 1 1 HELP motif TP53IP5 PF15331.6 ORF31838 - 0.18 12.0 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 DUF2628 PF10947.8 ORF31535 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) ubiquitin PF00240.23 ORF31475 - 2.6e-20 71.9 0.9 2.8e-20 71.8 0.9 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF31475 - 1.6e-12 47.1 1.6 1.7e-12 47.0 1.6 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 ORF31475 - 0.0093 16.1 0.1 0.021 14.9 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF31475 - 0.0094 16.3 0.9 0.0098 16.2 0.9 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 ORF31475 - 0.014 15.8 0.6 0.036 14.5 0.6 1.7 1 1 0 1 1 1 0 Ubiquitin-like domain DUF2407 PF10302.9 ORF31475 - 0.016 15.7 0.0 0.018 15.6 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain YiaAB PF05360.14 ORF31392 - 0.18 12.0 6.1 0.34 11.2 6.1 1.5 1 0 0 1 1 1 0 yiaA/B two helix domain RseC_MucC PF04246.12 ORF31392 - 1.4 8.9 5.6 1.7 8.6 5.6 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC CaATP_NAI PF12515.8 ORF31315 - 0.037 13.6 0.6 0.098 12.3 0.0 1.8 2 0 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain DUF4347 PF14252.6 ORF31314 - 0.0097 15.8 0.6 0.011 15.5 0.6 1.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4347) GST_C_3 PF14497.6 ORF31302 - 0.00032 20.9 0.0 0.00036 20.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF31302 - 0.0015 18.7 0.0 0.0018 18.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain RINGv PF12906.7 ORF31256 - 0.037 14.1 4.2 0.048 13.8 4.2 1.3 1 0 0 1 1 1 0 RING-variant domain Mnd1 PF03962.15 ORF31182 - 0.032 14.5 0.2 0.038 14.3 0.2 1.2 1 0 0 1 1 1 0 Mnd1 HTH domain RP853 PF17542.2 ORF31182 - 0.048 12.8 0.4 0.048 12.8 0.4 1.0 1 0 0 1 1 1 0 Uncharacterized RP853 Pox_VLTF3 PF04947.14 ORF31182 - 0.056 13.2 0.3 0.059 13.1 0.3 1.2 1 0 0 1 1 1 0 Poxvirus Late Transcription Factor VLTF3 like DUF3270 PF11674.8 ORF30774 - 2.9 8.2 9.3 3.8 7.8 9.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) ATP_transf PF09830.9 ORF30660 - 0.019 15.1 0.0 0.024 14.8 0.0 1.1 1 0 0 1 1 1 0 ATP adenylyltransferase NYD-SP28 PF14772.6 ORF3060 - 0.021 14.9 7.4 0.031 14.3 7.4 1.3 1 1 0 1 1 1 0 Sperm tail La PF05383.17 ORF3060 - 0.035 14.1 0.4 0.045 13.8 0.4 1.3 1 0 0 1 1 1 0 La domain DDT PF02791.17 ORF30500 - 0.041 14.2 1.2 0.059 13.7 1.2 1.4 1 1 0 1 1 1 0 DDT domain YL1 PF05764.13 ORF30175 - 5.7 7.0 15.4 5.6 7.0 15.4 1.0 1 0 0 1 1 1 0 YL1 nuclear protein Pep1_7 PF17232.2 ORF29948 - 1.3 9.6 5.7 1.6 9.3 5.7 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 TF_Otx PF03529.13 ORF29829 - 0.026 14.9 0.2 0.029 14.7 0.2 1.1 1 0 0 1 1 1 0 Otx1 transcription factor FKS1_dom1 PF14288.6 ORF29602 - 0.015 15.6 0.2 0.016 15.6 0.2 1.1 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 C2 PF00168.30 ORF29555 - 4.3e-10 39.8 0.0 4.5e-10 39.7 0.0 1.0 1 0 0 1 1 1 1 C2 domain Histone_HNS PF00816.21 ORF29555 - 0.091 13.6 0.1 0.1 13.4 0.1 1.1 1 0 0 1 1 1 0 H-NS histone family Ribosomal_S12 PF17487.2 ORF29273 - 0.047 14.4 3.3 0.048 14.4 3.3 1.0 1 0 0 1 1 1 0 Ribosomal protein S12 Sin_N PF04801.13 ORF28703 - 0.012 14.8 0.1 0.012 14.8 0.1 1.0 1 0 0 1 1 1 0 Sin-like protein conserved region STAG PF08514.11 ORF28621 - 6.5e-05 22.8 0.4 7.6e-05 22.6 0.4 1.1 1 0 0 1 1 1 1 STAG domain T4BSS_DotH_IcmK PF12293.8 ORF28579 - 0.023 14.0 0.0 0.025 13.8 0.0 1.0 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion Kelch_1 PF01344.25 ORF28500 - 2.3e-05 23.9 0.1 4.2e-05 23.0 0.0 1.4 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 ORF28500 - 0.0038 17.5 0.0 0.0071 16.6 0.0 1.4 2 0 0 2 2 2 1 Kelch motif Kelch_3 PF13415.6 ORF28500 - 0.035 14.4 0.0 0.04 14.2 0.0 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF28500 - 0.16 12.0 0.1 0.71 9.9 0.1 1.8 2 0 0 2 2 2 0 Galactose oxidase, central domain cNMP_binding PF00027.29 ORF28320 - 0.0006 19.8 0.0 0.00069 19.6 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Bap31_Bap29_C PF18035.1 ORF28123 - 0.048 13.7 0.0 0.071 13.1 0.0 1.3 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain DUF3536 PF12055.8 ORF27768 - 0.08 12.2 0.0 0.08 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3536) zf-ANAPC11 PF12861.7 ORF2760 - 0.14 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger MORN PF02493.20 ORF2753 - 3.6e-10 39.1 13.9 1.6e-07 30.8 0.9 3.5 3 1 0 3 3 3 2 MORN repeat DUF3048_C PF17479.2 ORF2753 - 0.014 15.7 0.5 0.019 15.4 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain Gln-synt_C-ter PF18318.1 ORF2753 - 1.4 8.8 4.6 1.5 8.7 1.1 1.9 1 1 1 2 2 2 0 Glutamine synthetase C-terminal domain DUF5101 PF17031.5 ORF27495 - 0.024 14.7 1.5 0.026 14.6 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) UreE_N PF02814.15 ORF27104 - 0.017 14.7 0.2 0.028 14.0 0.2 1.3 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain DUF3836 PF12930.7 ORF25718 - 0.034 13.9 0.6 0.039 13.7 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF3836) MASE2 PF05230.11 ORF25352 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain TetR_C_27 PF17935.1 ORF25240 - 0.012 15.6 0.2 0.014 15.5 0.2 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CTP_synth_N PF06418.14 ORF25177 - 0.038 13.3 0.1 0.04 13.2 0.1 1.0 1 0 0 1 1 1 0 CTP synthase N-terminus Tenui_NCP PF04876.12 ORF25102 - 0.18 11.4 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 Tenuivirus major non-capsid protein TF_Otx PF03529.13 ORF24912 - 0.026 14.9 0.2 0.029 14.7 0.2 1.1 1 0 0 1 1 1 0 Otx1 transcription factor Pkinase PF00069.25 ORF24686 - 1.9e-14 53.7 0.0 1.9e-14 53.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24686 - 8e-07 28.6 0.0 8e-07 28.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF24686 - 4.5e-06 25.7 0.0 5.4e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF24686 - 0.0046 16.3 0.0 0.0046 16.3 0.0 1.0 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF24686 - 0.012 15.6 0.0 0.012 15.6 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF24686 - 0.036 13.4 0.0 0.036 13.4 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF24686 - 0.099 11.7 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 GGDEF PF00990.21 ORF24479 - 1.3e-08 34.8 0.0 1.3e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain Actin PF00022.19 ORF23688 - 1.1e-25 90.1 0.0 1.2e-25 90.0 0.0 1.0 1 0 0 1 1 1 1 Actin DUF3439 PF11921.8 ORF23205 - 0.05 13.6 3.6 0.059 13.3 3.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) PipA PF07108.11 ORF23061 - 0.12 11.9 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 PipA protein SSP160 PF06933.11 ORF23038 - 0.054 11.7 6.4 0.057 11.6 6.4 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 RTX PF02382.15 ORF23038 - 8.8 5.9 8.6 8.6 5.9 8.6 1.0 1 0 0 1 1 1 0 N-terminal domain in RTX protein MoaF PF10703.9 ORF22993 - 0.0056 16.6 0.0 0.0062 16.5 0.0 1.0 1 0 0 1 1 1 1 MoaF N-terminal domain p450 PF00067.22 ORF22861 - 3.7e-11 42.4 0.0 3.8e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF3270 PF11674.8 ORF22789 - 2.7 8.3 6.6 3.4 7.9 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) FBA_1 PF07734.13 ORF22391 - 0.0049 16.8 0.3 0.0049 16.8 0.3 1.1 1 0 0 1 1 1 1 F-box associated HTH_Tnp_Tc3_1 PF11427.8 ORF22283 - 0.0076 16.1 0.5 0.011 15.6 0.5 1.3 1 0 0 1 1 1 1 Tc3 transposase DUF3100 PF11299.8 ORF2222 - 0.015 14.7 0.0 0.015 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3100) pPIWI_RE_Z PF18155.1 ORF21672 - 0.086 12.7 0.3 0.099 12.5 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z Pilin_N PF07790.11 ORF21537 - 0.075 14.0 0.7 0.1 13.5 0.7 1.4 1 1 0 1 1 1 0 Archaeal Type IV pilin, N-terminal DUF4013 PF13197.6 ORF20916 - 0.051 13.4 3.0 0.059 13.2 3.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) MoaF PF10703.9 ORF20653 - 0.0056 16.6 0.0 0.0062 16.5 0.0 1.0 1 0 0 1 1 1 1 MoaF N-terminal domain Wtap PF17098.5 ORF20550 - 0.1 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 WTAP/Mum2p family SAUGI PF06106.11 ORF20482 - 0.13 12.8 1.0 0.14 12.7 1.0 1.1 1 0 0 1 1 1 0 S. aureus uracil DNA glycosylase inhibitor Tetrabrachion PF11401.8 ORF20479 - 0.055 13.5 0.4 0.071 13.1 0.2 1.3 1 1 0 1 1 1 0 Tetrabrachion Ppx-GppA PF02541.16 ORF20479 - 0.076 12.4 0.1 0.085 12.3 0.1 1.0 1 0 0 1 1 1 0 Ppx/GppA phosphatase family TAXi_C PF14541.6 ORF20475 - 3.5e-07 30.1 0.0 3.6e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF20475 - 0.00044 19.8 0.0 0.00045 19.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Actin PF00022.19 ORF2032 - 1.1e-25 90.1 0.0 1.2e-25 90.0 0.0 1.0 1 0 0 1 1 1 1 Actin DUF2201_N PF13203.6 ORF20213 - 0.25 10.9 1.0 0.25 10.9 1.0 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain MASE2 PF05230.11 ORF20038 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain Orn_DAP_Arg_deC PF00278.22 ORF1955 - 0.053 13.8 0.0 0.054 13.7 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Trans_reg_C PF00486.28 ORF19444 - 8e-23 80.3 0.3 8.7e-23 80.2 0.3 1.0 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Pep1_7 PF17232.2 ORF19057 - 1.3 9.6 5.7 1.6 9.3 5.7 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 TF_Otx PF03529.13 ORF19 - 0.026 14.9 0.2 0.029 14.7 0.2 1.1 1 0 0 1 1 1 0 Otx1 transcription factor C2-set_2 PF08205.12 ORF1870 - 0.066 13.3 0.2 0.078 13.1 0.2 1.1 1 0 0 1 1 1 0 CD80-like C2-set immunoglobulin domain ARL6IP6 PF15062.6 ORF18183 - 0.029 14.5 0.7 0.036 14.2 0.7 1.1 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix DUF4446 PF14584.6 ORF1772 - 0.051 13.6 0.1 0.052 13.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) EAR PF07897.11 ORF16619 - 0.072 12.7 0.3 0.072 12.7 0.3 1.8 2 0 0 2 2 2 0 Ethylene-responsive binding factor-associated repression C2 PF00168.30 ORF16024 - 4.3e-10 39.8 0.0 4.5e-10 39.7 0.0 1.0 1 0 0 1 1 1 1 C2 domain Histone_HNS PF00816.21 ORF16024 - 0.091 13.6 0.1 0.1 13.4 0.1 1.1 1 0 0 1 1 1 0 H-NS histone family DUF4093 PF13331.6 ORF15997 - 0.026 15.0 1.0 0.031 14.7 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) CAAX_1 PF15895.5 ORF14608 - 0.21 11.5 5.7 0.23 11.3 5.7 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 DUF5549 PF17703.1 ORF14563 - 0.49 10.0 5.8 0.49 10.0 5.8 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5549) FAA_hydrolase PF01557.18 ORF14523 - 2.2e-08 34.1 0.0 2.3e-08 34.0 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Rad1 PF02144.16 ORF1443 - 0.091 11.8 0.1 0.091 11.8 0.1 1.1 1 0 0 1 1 1 0 Repair protein Rad1/Rec1/Rad17 Limkain-b1 PF11608.8 ORF14264 - 0.041 13.9 0.2 0.043 13.9 0.2 1.1 1 0 0 1 1 1 0 Limkain b1 Fusion_gly PF00523.18 ORF14095 - 0.0077 14.5 0.5 0.0084 14.4 0.5 1.0 1 0 0 1 1 1 1 Fusion glycoprotein F0 F-box-like_2 PF13013.6 ORF13785 - 0.082 12.9 0.2 0.1 12.6 0.2 1.2 1 0 0 1 1 1 0 F-box-like domain MSC PF09402.10 ORF13547 - 0.092 12.2 1.0 0.089 12.2 1.0 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain DMPK_coil PF08826.10 ORF13276 - 0.02 15.0 0.2 0.025 14.7 0.2 1.1 1 0 0 1 1 1 0 DMPK coiled coil domain like DUF167 PF02594.16 ORF13272 - 4.3e-13 49.2 0.0 4.9e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 CS PF04969.16 ORF13272 - 0.1 13.6 0.1 0.15 13.1 0.1 1.3 1 1 0 1 1 1 0 CS domain zf-AD PF07776.15 ORF13272 - 0.13 12.5 0.1 0.15 12.3 0.1 1.1 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) PyrBI_leader PF08052.11 ORF13176 - 8.5e-34 115.3 5.4 8.5e-34 115.3 5.4 1.6 2 0 0 2 2 2 1 PyrBI operon leader peptide KNTase_C PF07827.11 ORF13059 - 0.035 13.9 0.1 0.04 13.7 0.1 1.0 1 0 0 1 1 1 0 KNTase C-terminal domain Maelstrom PF13017.6 ORF13059 - 0.058 13.0 0.6 0.057 13.1 0.6 1.0 1 0 0 1 1 1 0 piRNA pathway germ-plasm component DUF3544 PF12064.8 ORF12854 - 0.072 13.4 0.2 0.078 13.2 0.2 1.1 1 0 0 1 1 1 0 Protein kinase C-binding protein 1 MASE2 PF05230.11 ORF12667 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain DUF4210 PF13915.6 ORF123 - 0.039 14.5 0.0 0.057 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) DUF3551 PF12071.8 ORF12246 - 0.062 13.4 0.6 0.077 13.1 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3551) OAD_gamma PF04277.13 ORF12076 - 0.0049 17.4 0.1 0.0058 17.2 0.1 1.2 1 0 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain SieB PF14163.6 ORF12076 - 0.013 14.9 0.1 0.015 14.8 0.1 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B Protocadherin PF08374.11 ORF12076 - 0.038 14.0 0.3 0.038 14.0 0.3 1.0 1 0 0 1 1 1 0 Protocadherin DUF4446 PF14584.6 ORF12076 - 0.046 13.7 0.1 0.048 13.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) EphA2_TM PF14575.6 ORF12076 - 0.051 14.5 0.1 0.055 14.3 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Peptidase_S49_N PF08496.10 ORF12076 - 0.082 13.0 0.1 0.091 12.8 0.1 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF2500 PF10694.9 ORF12076 - 0.099 13.2 0.3 0.11 13.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) DUF4713 PF15831.5 ORF11249 - 0.11 12.9 0.5 0.17 12.3 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) zf_PR_Knuckle PF18445.1 ORF111615 - 0.24 11.2 0.4 0.34 10.8 0.4 1.2 1 0 0 1 1 1 0 PR zinc knuckle motif OAD_gamma PF04277.13 ORF111588 - 0.0049 17.4 0.1 0.0058 17.2 0.1 1.2 1 0 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain SieB PF14163.6 ORF111588 - 0.013 14.9 0.1 0.015 14.8 0.1 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B Protocadherin PF08374.11 ORF111588 - 0.038 14.0 0.3 0.038 14.0 0.3 1.0 1 0 0 1 1 1 0 Protocadherin DUF4446 PF14584.6 ORF111588 - 0.046 13.7 0.1 0.048 13.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) EphA2_TM PF14575.6 ORF111588 - 0.051 14.5 0.1 0.055 14.3 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Peptidase_S49_N PF08496.10 ORF111588 - 0.082 13.0 0.1 0.091 12.8 0.1 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF2500 PF10694.9 ORF111588 - 0.099 13.2 0.3 0.11 13.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) Fimbrial PF00419.20 ORF111554 - 0.018 15.3 0.2 0.021 15.1 0.2 1.2 1 0 0 1 1 1 0 Fimbrial protein RMF PF04957.12 ORF11148 - 0.00087 19.5 1.8 0.0011 19.2 1.8 1.2 1 0 0 1 1 1 1 Ribosome modulation factor TAFA PF12020.8 ORF11148 - 0.011 16.1 1.8 0.012 16.1 1.8 1.2 1 0 0 1 1 1 0 TAFA family HMw1_D2 PF18254.1 ORF111477 - 0.071 13.5 0.0 0.071 13.5 0.0 1.1 1 0 0 1 1 1 0 HMW1 domain 2 TP53IP5 PF15331.6 ORF111394 - 0.17 12.0 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 Synapsin_C PF02750.14 ORF111164 - 5.3e-07 29.3 0.0 5.9e-07 29.2 0.0 1.0 1 0 0 1 1 1 1 Synapsin, ATP binding domain HisK_N PF09385.10 ORF111040 - 0.023 14.6 0.0 0.024 14.6 0.0 1.0 1 0 0 1 1 1 0 Histidine kinase N terminal DUF5101 PF17031.5 ORF111026 - 0.024 14.7 1.5 0.026 14.6 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) Peptidase_S49 PF01343.18 ORF11067 - 0.092 12.7 0.1 0.099 12.6 0.1 1.0 1 0 0 1 1 1 0 Peptidase family S49 zf-RING_2 PF13639.6 ORF110339 - 0.036 14.4 1.4 0.053 13.9 1.4 1.2 1 0 0 1 1 1 0 Ring finger domain zf-rbx1 PF12678.7 ORF110339 - 0.064 13.6 1.0 0.09 13.1 1.0 1.3 1 0 0 1 1 1 0 RING-H2 zinc finger domain DUF1415 PF07209.12 ORF110223 - 0.061 13.1 0.1 0.064 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1415) DUF3270 PF11674.8 ORF110101 - 2.7 8.3 6.6 3.4 7.9 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF1328 PF07043.13 ORF109734 - 2.9e-13 49.8 23.6 3.6e-13 49.5 23.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1328) DUF3149 PF11346.8 ORF109734 - 0.023 14.3 0.8 0.023 14.3 0.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) DUF1435 PF07256.12 ORF109734 - 0.03 14.4 0.7 0.037 14.1 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1435) ThrE PF06738.12 ORF109734 - 0.051 12.9 4.4 0.054 12.8 4.4 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter Pox_A14 PF05767.12 ORF109734 - 0.2 11.8 4.4 0.26 11.5 4.4 1.2 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 IncE PF17627.2 ORF109734 - 0.32 11.0 6.0 0.36 10.9 6.0 1.0 1 0 0 1 1 1 0 Inclusion membrane protein E Phage_holin_3_6 PF07332.11 ORF109734 - 0.34 11.0 11.5 0.38 10.8 11.5 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 ORF109734 - 2.5 6.8 7.7 2.7 6.7 7.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FeoB_associated PF12669.7 ORF109734 - 5 7.6 7.8 14 6.2 0.5 2.2 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein CitMHS PF03600.16 ORF109734 - 6.3 5.9 9.6 6.8 5.8 9.6 1.0 1 0 0 1 1 1 0 Citrate transporter DUF1676 PF07898.13 ORF109734 - 8.4 6.4 8.0 9 6.3 8.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) FA_desaturase PF00487.24 ORF109734 - 8.9 6.1 6.3 9.6 6.0 6.3 1.0 1 0 0 1 1 1 0 Fatty acid desaturase MASE2 PF05230.11 ORF109680 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain pPIWI_RE_Z PF18155.1 ORF109241 - 0.075 12.9 0.3 0.084 12.7 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z DUF2647 PF10839.8 ORF109229 - 0.09 12.8 0.4 8.9 6.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2647) Rhabdo_ncap PF00945.18 ORF109172 - 0.67 8.8 2.5 0.76 8.6 2.5 1.0 1 0 0 1 1 1 0 Rhabdovirus nucleocapsid protein CENP-M PF11111.8 ORF108075 - 0.12 11.5 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Centromere protein M (CENP-M) TAF1D PF15333.6 ORF107740 - 1.9 8.1 7.8 2.1 8.0 7.8 1.0 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D DUF695 PF05117.12 ORF107538 - 0.046 13.9 0.0 0.049 13.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF695) MNNL PF07657.13 ORF10715 - 0.021 14.9 1.9 0.028 14.4 1.9 1.2 1 0 0 1 1 1 0 N terminus of Notch ligand zf-CGNR PF11706.8 ORF105921 - 1.6 8.7 6.8 0.63 9.9 1.9 2.5 1 1 1 2 2 2 0 CGNR zinc finger DUF1922 PF09082.10 ORF105652 - 0.12 12.7 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1922) RINGv PF12906.7 ORF105650 - 0.037 14.1 4.2 0.048 13.8 4.2 1.3 1 0 0 1 1 1 0 RING-variant domain Mad3_BUB1_I PF08311.12 ORF10530 - 0.0079 16.2 0.1 0.0084 16.1 0.1 1.1 1 0 0 1 1 1 1 Mad3/BUB1 homology region 1 DUF4715 PF15835.5 ORF104914 - 0.18 11.9 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4715) CHASE3 PF05227.13 ORF104871 - 0.0064 16.4 0.3 0.0077 16.1 0.3 1.1 1 0 0 1 1 1 1 CHASE3 domain DUF4093 PF13331.6 ORF104437 - 0.026 15.0 1.0 0.031 14.7 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) RGS12_us1 PF16613.5 ORF104099 - 0.04 14.2 0.1 0.048 14.0 0.1 1.1 1 0 0 1 1 1 0 Unstructured region of RGS12 zf_PR_Knuckle PF18445.1 ORF103819 - 0.24 11.2 0.4 0.34 10.8 0.4 1.2 1 0 0 1 1 1 0 PR zinc knuckle motif DUF962 PF06127.11 ORF103781 - 2.5 8.3 5.8 2.9 8.0 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DUF3270 PF11674.8 ORF103530 - 2.7 8.3 6.6 3.4 7.9 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) YL1 PF05764.13 ORF103477 - 6.4 6.8 15.5 6.2 6.9 15.5 1.0 1 0 0 1 1 1 0 YL1 nuclear protein pPIWI_RE_Z PF18155.1 ORF103255 - 0.075 12.9 0.3 0.084 12.7 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z Spo7_2_N PF15407.6 ORF103218 - 0.03 13.9 4.8 0.041 13.5 4.8 1.2 1 0 0 1 1 1 0 Sporulation protein family 7 ARL17 PF15840.5 ORF103141 - 0.042 14.2 0.2 0.053 13.9 0.2 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor-like protein 17 DUF1116 PF06545.11 ORF103100 - 0.091 12.2 0.0 0.091 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1116) COX4 PF02936.14 ORF103100 - 0.15 12.1 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV Lectin_C_term PF18022.1 ORF103051 - 0.085 13.3 0.7 0.11 13.0 0.7 1.1 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin C-terminal domain Kunitz_BPTI PF00014.23 ORF103051 - 0.3 11.3 4.1 0.42 10.9 4.1 1.3 1 0 0 1 1 1 0 Kunitz/Bovine pancreatic trypsin inhibitor domain Ax_dynein_light PF10211.9 ORF102888 - 2.4 8.0 12.1 2.7 7.9 12.1 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain TF_Otx PF03529.13 ORF102678 - 0.026 14.9 0.2 0.029 14.7 0.2 1.1 1 0 0 1 1 1 0 Otx1 transcription factor NAD_binding_11 PF14833.6 ORF102442 - 0.092 13.0 0.0 0.099 12.9 0.0 1.1 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RNA_POL_M_15KD PF02150.16 ORF102429 - 0.039 13.8 0.1 0.065 13.1 0.1 1.4 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit Monellin PF09200.10 ORF101897 - 0.035 14.0 0.0 0.053 13.4 0.0 1.3 1 0 0 1 1 1 0 Monellin Rep_N PF08724.10 ORF10181 - 0.08 12.7 0.0 0.081 12.7 0.0 1.1 1 0 0 1 1 1 0 Rep protein catalytic domain like DUF2717 PF10911.8 ORF101794 - 0.19 11.4 0.0 0.31 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2717) CBP_BcsF PF11120.8 ORF101783 - 2.5e-31 107.6 0.4 2.8e-31 107.4 0.4 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsF DUF2367 PF10164.9 ORF101783 - 0.077 13.5 0.1 0.1 13.1 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) DUF5313 PF17240.2 ORF101549 - 0.2 12.1 0.6 0.22 12.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Asp4 PF16996.5 ORF101549 - 1.3 8.9 6.1 1.9 8.3 6.1 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ycf1 PF05758.12 ORF101549 - 3.1 5.6 7.5 3.1 5.5 7.5 1.0 1 0 0 1 1 1 0 Ycf1 CD225 PF04505.12 ORF101455 - 0.052 13.7 0.1 0.065 13.4 0.1 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein DUF4210 PF13915.6 ORF101294 - 0.039 14.5 0.0 0.057 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) HTH_8 PF02954.19 ORF100300 - 1.7e-05 24.5 5.0 4.7e-05 23.1 4.1 2.1 1 1 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_50 PF18024.1 ORF100300 - 0.012 15.2 0.5 0.017 14.7 0.5 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_30 PF13556.6 ORF100300 - 0.066 13.0 0.1 0.09 12.6 0.1 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DUF3157 PF11355.8 ORF100300 - 0.15 11.7 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3157) Coagulin PF02035.15 ORF100171 - 0.045 13.6 2.7 0.052 13.4 2.7 1.1 1 0 0 1 1 1 0 Coagulin EIN3 PF04873.13 NODE_87384_length_184_cov_0.778523_g79443_i0forward_frame_1 - 0.14 11.4 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 Ethylene insensitive 3 Sh_2 PF17512.2 NODE_87381_length_184_cov_0.805369_g79440_i0forward_frame_1 - 0.16 11.7 1.3 0.17 11.6 1.3 1.0 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein Lamprin PF06403.11 NODE_87367_length_184_cov_0.926174_g79426_i0forward_frame_1 - 0.02 14.9 0.0 0.02 14.9 0.0 1.0 1 0 0 1 1 1 0 Lamprin DUF3915 PF13054.6 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_1 - 0.0014 18.6 2.4 0.0016 18.4 2.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) PHY PF00360.20 NODE_87357_length_184_cov_0.966443_g79416_i0forward_frame_1 - 0.073 12.4 0.0 0.073 12.4 0.0 1.1 1 0 0 1 1 1 0 Phytochrome region zf-C3HC4_4 PF15227.6 NODE_87356_length_184_cov_0.973154_g79415_i0reverse_frame_1 - 0.076 13.2 0.2 0.14 12.3 0.2 1.4 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING Pkinase PF00069.25 NODE_87355_length_184_cov_0.993289_g79414_i0reverse_frame_1 - 0.00055 19.4 0.0 0.00057 19.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_87355_length_184_cov_0.993289_g79414_i0reverse_frame_1 - 0.0019 17.5 0.0 0.0021 17.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase CBM_1 PF00734.18 NODE_87352_length_184_cov_1.000000_g79411_i0forward_frame_1 - 0.0048 16.8 1.4 0.01 15.8 1.4 1.6 1 1 0 1 1 1 1 Fungal cellulose binding domain SHD1 PF03983.12 NODE_87349_length_184_cov_1.006711_g79408_i0forward_frame_1 - 0.046 13.6 0.0 0.056 13.3 0.0 1.1 1 0 0 1 1 1 0 SLA1 homology domain 1, SHD1 DUF1281_C PF18406.1 NODE_87347_length_184_cov_1.020134_g79406_i0reverse_frame_1 - 0.094 12.4 0.2 0.23 11.2 0.2 1.6 1 1 1 2 2 2 0 Ferredoxin-like domain in Api92-like protein NS3_envE PF02723.14 NODE_87340_length_184_cov_1.053691_g79399_i0reverse_frame_1 - 0.74 9.9 11.6 1.1 9.4 11.6 1.4 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E ASFV_J13L PF05568.11 NODE_87340_length_184_cov_1.053691_g79399_i0reverse_frame_1 - 7.5 6.3 6.5 8 6.2 6.5 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein ErmC PF06308.11 NODE_87339_length_184_cov_1.053691_g79398_i0forward_frame_1 - 0.26 11.6 0.9 5 7.6 0.1 2.2 2 0 0 2 2 2 0 23S rRNA methylastransferase leader peptide (ErmCL) DUF5596 PF18082.1 NODE_87334_length_184_cov_1.060403_g79393_i0reverse_frame_1 - 0.1 12.5 0.6 0.14 12.0 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5596) DAZAP2 PF11029.8 NODE_87327_length_184_cov_1.067114_g79386_i0reverse_frame_1 - 0.0025 18.8 0.2 0.0028 18.6 0.2 1.1 1 0 0 1 1 1 1 DAZ associated protein 2 (DAZAP2) P33MONOX PF15302.6 NODE_87327_length_184_cov_1.067114_g79386_i0reverse_frame_1 - 0.077 12.7 0.6 0.07 12.8 0.6 1.0 1 0 0 1 1 1 0 P33 mono-oxygenase DUF3287 PF11690.8 NODE_87327_length_184_cov_1.067114_g79386_i0reverse_frame_1 - 0.16 11.7 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) SUKH_6 PF14568.6 NODE_87324_length_184_cov_1.067114_g79383_i0reverse_frame_1 - 0.13 12.7 0.0 0.14 12.6 0.0 1.1 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall Ion_trans PF00520.31 NODE_87323_length_184_cov_1.067114_g79382_i0forward_frame_1 - 0.00022 20.5 0.2 0.00022 20.5 0.2 1.0 1 0 0 1 1 1 1 Ion transport protein Lamprin PF06403.11 NODE_87321_length_184_cov_1.067114_g79380_i0forward_frame_1 - 1.1 9.2 5.2 1.6 8.7 5.2 1.4 1 1 0 1 1 1 0 Lamprin Ribosomal_L4 PF00573.22 NODE_87320_length_184_cov_1.067114_g79379_i0forward_frame_1 - 0.024 14.3 3.6 0.026 14.2 3.6 1.0 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family HAP2-GCS1 PF10699.9 NODE_87314_length_184_cov_1.067114_g79373_i0forward_frame_1 - 1.8e-08 34.2 0.1 2.5e-08 33.8 0.1 1.1 1 0 0 1 1 1 1 Male gamete fusion factor LCE PF14672.6 NODE_87313_length_184_cov_1.067114_g79372_i0reverse_frame_1 - 0.003 18.1 10.6 0.0034 17.9 10.6 1.0 1 0 0 1 1 1 1 Late cornified envelope RPN2_C PF18004.1 NODE_87308_length_184_cov_1.067114_g79367_i0reverse_frame_1 - 0.013 15.4 1.1 0.014 15.4 1.1 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain Beach PF02138.18 NODE_87301_length_184_cov_1.067114_g79360_i0forward_frame_1 - 2.9e-12 46.6 2.5 3.6e-12 46.2 2.5 1.1 1 0 0 1 1 1 1 Beige/BEACH domain DUF273 PF03314.14 NODE_87301_length_184_cov_1.067114_g79360_i0forward_frame_1 - 0.02 14.4 0.2 0.02 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF273 2HCT PF03390.15 NODE_87292_length_184_cov_1.073826_g79351_i0forward_frame_1 - 0.099 11.2 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 2-hydroxycarboxylate transporter family GutM PF06923.11 NODE_87285_length_184_cov_1.073826_g79344_i0forward_frame_1 - 0.28 11.3 0.8 0.36 10.9 0.4 1.3 2 0 0 2 2 2 0 Glucitol operon activator protein (GutM) HigB_toxin PF09907.9 NODE_87282_length_184_cov_1.073826_g79341_i0reverse_frame_1 - 0.013 15.7 0.4 0.014 15.6 0.4 1.2 1 0 0 1 1 1 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system Tom37 PF10568.9 NODE_87282_length_184_cov_1.073826_g79341_i0reverse_frame_1 - 0.062 13.6 0.0 0.063 13.6 0.0 1.1 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein ANAPC4_WD40 PF12894.7 NODE_87274_length_184_cov_1.073826_g79333_i0forward_frame_1 - 0.00092 19.5 0.0 0.001 19.3 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 NODE_87274_length_184_cov_1.073826_g79333_i0forward_frame_1 - 0.0024 18.6 2.8 0.16 12.9 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF3331 PF11811.8 NODE_87260_length_184_cov_1.073826_g79319_i0forward_frame_1 - 0.073 12.9 0.0 0.085 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) HABP4_PAI-RBP1 PF04774.15 NODE_87255_length_184_cov_1.073826_g79314_i0reverse_frame_1 - 0.019 15.8 1.7 0.022 15.6 1.7 1.1 1 0 0 1 1 1 0 Hyaluronan / mRNA binding family PDE6_gamma PF04868.12 NODE_87249_length_184_cov_1.073826_g79308_i0forward_frame_1 - 0.34 11.2 2.0 0.38 11.0 2.0 1.1 1 0 0 1 1 1 0 Retinal cGMP phosphodiesterase, gamma subunit Arc_C PF18162.1 NODE_87242_length_184_cov_1.073826_g79301_i0reverse_frame_1 - 0.068 13.0 0.0 0.096 12.5 0.0 1.2 1 0 0 1 1 1 0 Arc C-lobe Na_Ca_ex PF01699.24 NODE_87239_length_184_cov_1.073826_g79298_i0forward_frame_1 - 0.0052 16.8 0.3 0.0052 16.8 0.3 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein Tir_receptor_M PF03549.14 NODE_87235_length_184_cov_1.073826_g79294_i0reverse_frame_1 - 0.098 13.0 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) intimin-binding domain Tubulin PF00091.25 NODE_87225_length_184_cov_1.073826_g79284_i0forward_frame_1 - 1.9e-16 60.8 0.2 2e-16 60.8 0.2 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain NAD_binding_10 PF13460.6 NODE_87225_length_184_cov_1.073826_g79284_i0forward_frame_1 - 0.11 12.3 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H-binding ChlamPMP_M PF07548.11 NODE_87215_length_184_cov_1.073826_g79274_i0reverse_frame_1 - 0.078 12.9 0.2 0.088 12.7 0.2 1.0 1 0 0 1 1 1 0 Chlamydia polymorphic membrane protein middle domain UL11 PF11094.8 NODE_87211_length_184_cov_1.073826_g79270_i0forward_frame_1 - 1.4 8.9 9.2 0.21 11.5 3.3 2.0 2 0 0 2 2 2 0 Membrane-associated tegument protein DUF4637 PF15470.6 NODE_87205_length_184_cov_1.100671_g79264_i0reverse_frame_1 - 2.4 7.8 8.5 2.8 7.7 8.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF678 PF05077.12 NODE_87195_length_184_cov_1.147651_g79254_i0forward_frame_1 - 0.09 12.9 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF678) Takusan PF04822.13 NODE_87194_length_184_cov_1.154362_g79253_i0reverse_frame_1 - 0.028 14.3 0.5 0.037 13.9 0.5 1.1 1 0 0 1 1 1 0 Takusan # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks401.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks401.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks401.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks401.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:32:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CTV_P13 PF06922.11 NODE_87186_length_184_cov_1.174497_g79245_i0reverse_frame_1 - 0.061 13.4 0.0 0.073 13.1 0.0 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P13 protein Put_DNA-bind_N PF06971.13 NODE_87182_length_184_cov_1.181208_g79241_i0reverse_frame_1 - 0.019 14.9 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus DUF5371 PF17341.2 NODE_87174_length_184_cov_1.214765_g79233_i0forward_frame_1 - 0.039 14.2 0.1 0.045 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5371) MatE PF01554.18 NODE_87172_length_184_cov_1.214765_g79231_i0reverse_frame_1 - 5.7e-07 29.3 0.1 5.9e-07 29.3 0.1 1.0 1 0 0 1 1 1 1 MatE UMPH-1 PF05822.12 NODE_87171_length_184_cov_1.221477_g79230_i0forward_frame_1 - 0.25 10.8 0.1 0.28 10.7 0.1 1.0 1 0 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) Gal_Lectin PF02140.18 NODE_87167_length_184_cov_1.255034_g79226_i0reverse_frame_1 - 0.044 14.2 0.3 0.053 14.0 0.3 1.1 1 0 0 1 1 1 0 Galactose binding lectin domain zf-C3HC4_2 PF13923.6 NODE_87131_length_184_cov_1.342282_g79190_i0forward_frame_1 - 0.044 13.6 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) YABBY PF04690.13 NODE_87128_length_184_cov_1.342282_g79187_i0forward_frame_1 - 0.071 13.7 0.2 0.071 13.7 0.2 1.1 1 0 0 1 1 1 0 YABBY protein Nepo_coat_N PF03689.15 NODE_87121_length_184_cov_1.362416_g79180_i0reverse_frame_1 - 0.056 13.4 0.0 0.081 12.9 0.0 1.2 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain zf-ISL3 PF14690.6 NODE_87119_length_184_cov_1.362416_g79178_i0forward_frame_1 - 0.0048 17.5 0.4 0.0093 16.6 0.4 1.4 1 0 0 1 1 1 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AKAP2_C PF15304.6 NODE_87119_length_184_cov_1.362416_g79178_i0forward_frame_1 - 0.12 11.7 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 A-kinase anchor protein 2 C-terminus DUF5304 PF17230.2 NODE_87109_length_184_cov_1.422819_g79168_i0reverse_frame_1 - 0.03 14.6 0.0 0.034 14.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5304) zf-C5HC2 PF02928.16 NODE_87109_length_184_cov_1.422819_g79168_i0forward_frame_1 - 0.013 15.9 2.1 0.017 15.5 2.1 1.1 1 0 0 1 1 1 0 C5HC2 zinc finger Ran_BP1 PF00638.18 NODE_87107_length_184_cov_1.429530_g79166_i0reverse_frame_1 - 0.016 15.5 0.6 0.017 15.4 0.6 1.0 1 0 0 1 1 1 0 RanBP1 domain Adeno_PX PF05829.12 NODE_87103_length_184_cov_1.469799_g79162_i0forward_frame_1 - 0.42 10.5 0.3 0.42 10.5 0.3 1.5 2 0 0 2 2 2 0 Adenovirus late L2 mu core protein (Protein X) zinc_ribbon_9 PF14369.6 NODE_87098_length_184_cov_1.496644_g79157_i0forward_frame_1 - 0.25 11.7 2.4 4.9 7.5 2.4 2.1 1 1 0 1 1 1 0 zinc-ribbon DUF3072 PF11272.8 NODE_87097_length_184_cov_1.503356_g79156_i0forward_frame_1 - 0.13 12.2 0.4 1.8 8.6 0.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3072) RVT_1 PF00078.27 NODE_87087_length_184_cov_1.557047_g79146_i0reverse_frame_1 - 6.6e-08 32.3 0.0 7e-08 32.3 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF2644 PF10841.8 NODE_87079_length_184_cov_1.563758_g79138_i0forward_frame_1 - 0.15 12.3 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) ODV-E18 PF10717.9 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 0.054 13.4 2.1 0.065 13.1 2.1 1.3 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 DUF929 PF06053.11 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 0.1 11.9 0.4 0.099 11.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) ASFV_J13L PF05568.11 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 0.12 12.1 0.4 0.13 12.0 0.4 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein DUF5385 PF17359.2 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 0.52 9.8 1.2 0.58 9.7 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) FeoB_associated PF12669.7 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 0.74 10.3 4.5 0.99 9.9 4.5 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Glyco_hydro_38N PF01074.22 NODE_87077_length_184_cov_1.570470_g79136_i0forward_frame_1 - 1e-14 54.6 0.0 1.1e-14 54.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain VASt PF16016.5 NODE_87074_length_184_cov_1.583893_g79133_i0forward_frame_1 - 0.11 12.9 0.0 0.12 12.8 0.0 1.0 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain 2OG-FeII_Oxy_4 PF13661.6 NODE_87069_length_184_cov_1.597315_g79128_i0forward_frame_1 - 0.17 12.6 0.0 0.17 12.6 0.0 1.1 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Aa_trans PF01490.18 NODE_87067_length_184_cov_1.597315_g79126_i0reverse_frame_1 - 4.1e-06 25.8 4.1 4.3e-06 25.7 4.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein EI24 PF07264.11 NODE_87067_length_184_cov_1.597315_g79126_i0reverse_frame_1 - 0.033 14.4 2.8 0.034 14.4 2.8 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) VPDSG-CTERM PF18205.1 NODE_87065_length_184_cov_1.604027_g79124_i0forward_frame_1 - 0.23 11.3 1.5 0.31 10.9 1.5 1.2 1 0 0 1 1 1 0 VPDSG-CTERM motif QSregVF_b PF12843.7 NODE_87059_length_184_cov_1.610738_g79118_i0forward_frame_1 - 0.012 15.5 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor HTH_11 PF08279.12 NODE_87054_length_184_cov_1.610738_g79113_i0forward_frame_1 - 0.27 11.2 0.4 16 5.5 0.0 2.1 2 0 0 2 2 2 0 HTH domain Acp26Ab PF05777.12 NODE_87038_length_184_cov_1.651007_g79097_i0forward_frame_1 - 0.097 13.3 0.1 0.11 13.2 0.1 1.1 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) DUF2750 PF11042.8 NODE_87030_length_184_cov_1.718121_g79089_i0reverse_frame_1 - 0.15 12.2 0.0 0.16 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2750) DUF2691 PF10903.8 NODE_87016_length_184_cov_1.818792_g79075_i0reverse_frame_1 - 0.13 12.2 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2691) DUF4552 PF15089.6 NODE_87012_length_184_cov_1.845638_g79071_i0forward_frame_1 - 0.076 12.1 0.1 0.084 11.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) Kinesin PF00225.23 NODE_87003_length_184_cov_1.879195_g79062_i0reverse_frame_1 - 5.6e-22 78.1 0.1 5.8e-22 78.0 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain PHM7_cyt PF14703.6 NODE_87002_length_184_cov_1.899329_g79061_i0forward_frame_1 - 0.11 12.8 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Herpes_HEPA PF03324.14 NODE_86978_length_184_cov_2.140940_g79037_i0reverse_frame_1 - 0.15 12.5 0.1 0.17 12.4 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus DNA helicase/primase complex associated protein IML1 PF12257.8 NODE_86970_length_184_cov_2.167785_g79029_i0forward_frame_1 - 0.076 12.1 0.0 0.083 12.0 0.0 1.0 1 0 0 1 1 1 0 Vacuolar membrane-associated protein Iml1 RecR PF02132.15 NODE_86968_length_184_cov_2.174497_g79027_i0forward_frame_1 - 0.15 11.6 0.9 0.2 11.3 0.9 1.1 1 0 0 1 1 1 0 RecR protein DUF1488 PF07369.11 NODE_86967_length_184_cov_2.174497_g79026_i0forward_frame_1 - 0.00049 20.0 0.0 0.00056 19.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1488) RRN9 PF10680.9 NODE_86961_length_184_cov_2.255034_g79020_i0forward_frame_1 - 0.014 15.7 0.8 0.015 15.5 0.8 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor NAM-associated PF14303.6 NODE_86958_length_184_cov_2.308725_g79017_i0reverse_frame_1 - 3.4 8.4 10.3 4.1 8.1 10.3 1.0 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain Trypan_PARP PF05887.11 NODE_86957_length_184_cov_2.335570_g79016_i0forward_frame_1 - 3.8 7.5 10.5 4.2 7.3 10.5 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) FAP PF07174.11 NODE_86957_length_184_cov_2.335570_g79016_i0forward_frame_1 - 6.8 6.1 10.1 7.5 5.9 10.1 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DHC_N2 PF08393.13 NODE_86940_length_184_cov_2.503356_g78999_i0reverse_frame_1 - 8.7e-06 25.1 0.0 1e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 DUF5039 PF16442.5 NODE_86937_length_184_cov_2.624161_g78996_i0forward_frame_1 - 0.074 12.6 0.0 0.088 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5039) Rad33 PF08730.10 NODE_86924_length_184_cov_2.859060_g78983_i0forward_frame_1 - 0.013 15.5 1.0 0.014 15.4 1.0 1.1 1 0 0 1 1 1 0 Rad33 Lamprin PF06403.11 NODE_86919_length_184_cov_3.060403_g78978_i0forward_frame_1 - 0.22 11.5 4.0 0.3 11.0 4.0 1.3 1 0 0 1 1 1 0 Lamprin DUF5320 PF17253.2 NODE_86919_length_184_cov_3.060403_g78978_i0forward_frame_1 - 4.1 8.5 8.5 5 8.3 8.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5320) zf-His_Me_endon PF05551.11 NODE_86915_length_184_cov_3.140940_g78974_i0reverse_frame_1 - 0.0025 18.0 0.4 0.0029 17.8 0.4 1.0 1 0 0 1 1 1 1 Zinc-binding loop region of homing endonuclease Lamprin PF06403.11 NODE_86914_length_184_cov_3.214765_g78973_i0reverse_frame_1 - 0.011 15.7 3.8 0.011 15.7 3.8 1.0 1 0 0 1 1 1 0 Lamprin Rad9_Rad53_bind PF08605.10 NODE_86910_length_184_cov_4.013423_g78969_i0reverse_frame_1 - 0.11 12.7 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Fungal Rad9-like Rad53-binding ProQ PF04352.13 NODE_86903_length_184_cov_7.516779_g78962_i0reverse_frame_1 - 0.005 16.7 0.0 0.0051 16.7 0.0 1.2 1 0 0 1 1 1 1 ProQ/FINO family ETRAMP PF09716.10 NODE_86902_length_184_cov_8.718121_g78961_i0forward_frame_1 - 1.1 9.3 13.9 1.4 9.1 13.9 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF4349 PF14257.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.016 14.6 1.2 0.019 14.4 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) TMEM154 PF15102.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.031 14.2 3.6 0.037 13.9 3.6 1.2 1 0 0 1 1 1 0 TMEM154 protein family DUF4577 PF15145.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.041 13.9 3.6 0.045 13.8 3.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Shisa PF13908.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.048 13.9 5.6 0.063 13.5 5.6 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Amnionless PF14828.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.076 11.8 4.6 0.086 11.7 4.6 1.0 1 0 0 1 1 1 0 Amnionless Orf78 PF06024.12 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.53 10.6 6.3 0.89 9.9 6.3 1.5 1 1 0 1 1 1 0 Orf78 (ac78) DUF4131 PF13567.6 NODE_86900_length_184_cov_12.006711_g78959_i0forward_frame_1 - 9.8 5.8 11.2 9.8 5.8 11.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) B277 PF17623.2 NODE_86894_length_184_cov_16.885906_g78953_i0reverse_frame_1 - 0.06 12.4 1.7 0.061 12.4 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function MMPL PF03176.15 NODE_86887_length_184_cov_20.751678_g78946_i0forward_frame_1 - 0.068 12.1 0.0 0.078 11.9 0.0 1.0 1 0 0 1 1 1 0 MMPL family TarH PF02203.15 NODE_86887_length_184_cov_20.751678_g78946_i0forward_frame_1 - 1.5 8.7 4.3 1.7 8.5 4.3 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue Bunya_G1 PF03557.15 NODE_86873_length_184_cov_30.832215_g78932_i0reverse_frame_1 - 0.11 10.5 0.1 0.11 10.5 0.1 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G1 zf-RING_2 PF13639.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 1.2e-07 31.9 1.7 1.7e-07 31.5 1.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 1.3e-07 31.8 1.5 1.8e-07 31.4 1.5 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 5.9e-06 26.3 0.2 6.7e-06 26.1 0.2 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 6.1e-06 25.8 0.5 8.4e-06 25.3 0.5 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 1.1e-05 25.1 1.0 1.1e-05 25.1 1.0 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.00015 21.5 5.0 0.00045 20.0 5.0 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.00018 21.5 1.1 0.00022 21.2 0.5 1.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.00069 19.3 0.2 0.0013 18.4 0.2 1.5 1 0 0 1 1 1 1 RING-like zinc finger PHD PF00628.29 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0021 17.9 1.8 0.0031 17.4 1.8 1.3 1 0 0 1 1 1 1 PHD-finger FANCL_C PF11793.8 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0037 17.4 3.1 0.01 16.0 3.1 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3H2C3 PF17122.5 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0042 17.1 3.0 0.049 13.7 0.2 2.1 2 0 0 2 2 2 1 Zinc-finger RINGv PF12906.7 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0043 17.2 1.2 0.0066 16.6 1.2 1.3 1 0 0 1 1 1 1 RING-variant domain zf-TFIIB PF13453.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0051 16.1 2.4 0.54 9.6 0.1 2.6 3 0 0 3 3 3 2 Transcription factor zinc-finger zf-C3HC4_3 PF13920.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0053 16.6 0.7 0.0075 16.1 0.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0062 16.5 2.1 0.012 15.6 2.1 1.5 1 1 0 1 1 1 1 zinc-RING finger domain YdjO PF14169.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.01 15.6 0.9 0.014 15.1 0.9 1.3 1 0 0 1 1 1 1 Cold-inducible protein YdjO zf-RING_4 PF14570.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.023 14.5 1.2 0.034 14.0 1.2 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain OrfB_Zn_ribbon PF07282.11 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.033 14.1 0.7 5.9 6.9 0.1 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-trcl PF13451.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.058 13.3 1.0 0.058 13.3 1.0 1.8 2 1 0 2 2 1 0 Probable zinc-ribbon domain zf-RING-like PF08746.11 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.058 13.7 4.7 0.12 12.7 4.7 1.5 1 1 0 1 1 1 0 RING-like domain Prok-RING_4 PF14447.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.077 12.9 2.3 0.13 12.1 2.3 1.4 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-Nse PF11789.8 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.094 12.5 0.4 0.094 12.5 0.4 1.5 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit PDGF PF00341.17 NODE_86865_length_184_cov_33.429530_g78924_i0forward_frame_1 - 0.019 15.2 1.4 0.023 15.0 1.4 1.2 1 0 0 1 1 1 0 PDGF/VEGF domain FRQ PF09421.10 NODE_86860_length_184_cov_35.543624_g78919_i0forward_frame_1 - 0.036 12.1 1.8 0.038 12.0 1.8 1.0 1 0 0 1 1 1 0 Frequency clock protein zf-rbx1 PF12678.7 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 3.6e-06 27.2 0.0 5e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.00022 21.5 0.0 0.0003 21.1 0.0 1.2 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.0073 16.3 0.0 0.0093 16.0 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.026 14.1 0.0 0.032 13.9 0.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.065 13.1 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.12 12.1 1.2 0.25 11.1 1.2 1.5 1 0 0 1 1 1 0 RING-like zinc finger LRV_FeS PF05484.11 NODE_86851_length_184_cov_42.919463_g78910_i0reverse_frame_1 - 0.03 14.3 0.4 0.39 10.8 0.0 2.0 2 0 0 2 2 2 0 LRV protein FeS4 cluster DnaJ PF00226.31 NODE_86834_length_184_cov_65.604027_g78893_i0forward_frame_1 - 9.3e-05 22.5 1.2 0.00011 22.3 0.8 1.3 1 1 0 1 1 1 1 DnaJ domain Peptidase_C7 PF01830.18 NODE_86833_length_184_cov_66.268456_g78892_i0forward_frame_1 - 0.084 12.3 1.6 0.096 12.1 1.6 1.0 1 0 0 1 1 1 0 Peptidase C7 family SyrA PF11089.8 NODE_86830_length_184_cov_80.328859_g78889_i0reverse_frame_1 - 0.21 11.7 0.0 0.36 10.9 0.0 1.3 1 0 0 1 1 1 0 Exopolysaccharide production repressor UPF0259 PF06790.11 NODE_86821_length_184_cov_121.758389_g78880_i0reverse_frame_1 - 0.063 13.0 0.2 0.063 13.0 0.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0259) AAA_8 PF12780.7 NODE_86815_length_184_cov_202.134228_g78874_i0reverse_frame_1 - 5.2e-18 65.3 0.1 5.6e-18 65.2 0.1 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 TNFR_16_TM PF18422.1 NODE_86809_length_184_cov_1303.369128_g78868_i0reverse_frame_1 - 0.27 11.2 0.2 0.27 11.2 0.2 2.0 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain EBV-NA1 PF02905.14 NODE_86801_length_185_cov_0.833333_g78860_i0reverse_frame_1 - 0.12 12.2 0.1 0.12 12.1 0.1 1.0 1 0 0 1 1 1 0 Epstein Barr virus nuclear antigen-1, DNA-binding domain MFS_1 PF07690.16 NODE_86801_length_185_cov_0.833333_g78860_i0forward_frame_1 - 2.6e-08 33.2 0.6 2.7e-08 33.1 0.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sec23_trunk PF04811.15 NODE_86799_length_185_cov_0.846667_g78858_i0reverse_frame_1 - 6.1e-14 52.2 0.1 6.1e-14 52.2 0.1 1.0 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain SR-25 PF10500.9 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_1 - 2.2 7.9 16.3 2.5 7.7 16.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein TBCA PF02970.16 NODE_86787_length_185_cov_0.926667_g78846_i0forward_frame_1 - 0.028 14.7 3.2 0.033 14.5 3.2 1.2 1 0 0 1 1 1 0 Tubulin binding cofactor A Epiglycanin_C PF14654.6 NODE_86786_length_185_cov_0.926667_g78845_i0forward_frame_1 - 4.6 7.4 7.2 7.1 6.8 1.7 2.0 1 1 1 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region Lamprin PF06403.11 NODE_86785_length_185_cov_0.933333_g78844_i0forward_frame_1 - 9.3 6.2 14.4 4e+02 0.9 14.4 2.0 1 1 0 1 1 1 0 Lamprin PH_15 PF17339.2 NODE_86780_length_185_cov_0.973333_g78839_i0forward_frame_1 - 0.12 12.3 0.1 0.16 11.9 0.1 1.1 1 0 0 1 1 1 0 PH domain DUF832 PF05734.11 NODE_86779_length_185_cov_0.980000_g78838_i0forward_frame_1 - 0.35 10.3 1.0 0.36 10.3 1.0 1.0 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) Ccdc124 PF06244.12 NODE_86731_length_185_cov_1.066667_g78790_i0forward_frame_1 - 0.13 12.9 0.2 0.16 12.5 0.2 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 124 /Oxs1 DUF1010 PF06231.11 NODE_86719_length_185_cov_1.066667_g78778_i0reverse_frame_1 - 0.11 13.1 1.8 0.14 12.7 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) Spot_14 PF07084.12 NODE_86718_length_185_cov_1.066667_g78777_i0forward_frame_1 - 0.13 12.4 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Thyroid hormone-inducible hepatic protein Spot 14 HEAT PF02985.22 NODE_86713_length_185_cov_1.066667_g78772_i0forward_frame_1 - 0.0018 18.3 0.0 0.0034 17.5 0.0 1.4 1 0 0 1 1 1 1 HEAT repeat HEAT_EZ PF13513.6 NODE_86713_length_185_cov_1.066667_g78772_i0forward_frame_1 - 0.0038 17.7 0.0 0.52 10.9 0.0 1.7 1 1 1 2 2 2 2 HEAT-like repeat HEAT_2 PF13646.6 NODE_86713_length_185_cov_1.066667_g78772_i0forward_frame_1 - 0.049 14.0 0.0 0.056 13.8 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats Mo25 PF08569.11 NODE_86713_length_185_cov_1.066667_g78772_i0forward_frame_1 - 0.067 12.5 0.0 0.075 12.4 0.0 1.0 1 0 0 1 1 1 0 Mo25-like DUF1856 PF08983.10 NODE_86708_length_185_cov_1.066667_g78767_i0reverse_frame_1 - 0.045 14.0 0.2 0.085 13.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1856) Bd3614-deam PF14439.6 NODE_86699_length_185_cov_1.066667_g78758_i0reverse_frame_1 - 0.0047 17.0 0.0 0.0053 16.8 0.0 1.0 1 0 0 1 1 1 1 Bd3614-like deaminase DHODB_Fe-S_bind PF10418.9 NODE_86699_length_185_cov_1.066667_g78758_i0reverse_frame_1 - 0.013 15.3 0.7 0.017 14.9 0.7 1.3 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Amnionless PF14828.6 NODE_86684_length_185_cov_1.066667_g78743_i0reverse_frame_1 - 0.2 10.4 2.0 0.22 10.3 2.0 1.0 1 0 0 1 1 1 0 Amnionless Neisseria_PilC PF05567.11 NODE_86681_length_185_cov_1.066667_g78740_i0forward_frame_1 - 0.094 11.7 0.0 0.098 11.6 0.0 1.1 1 0 0 1 1 1 0 Neisseria PilC beta-propeller domain KleE PF17394.2 NODE_86674_length_185_cov_1.066667_g78733_i0reverse_frame_1 - 0.09 13.0 0.0 0.099 12.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein SNAP PF14938.6 NODE_86673_length_185_cov_1.066667_g78732_i0reverse_frame_1 - 0.04 13.3 0.1 0.045 13.2 0.1 1.0 1 0 0 1 1 1 0 Soluble NSF attachment protein, SNAP HTH_33 PF13592.6 NODE_86669_length_185_cov_1.086667_g78728_i0reverse_frame_1 - 0.075 12.7 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn helix INTAP PF16617.5 NODE_86661_length_185_cov_1.133333_g78720_i0reverse_frame_1 - 0.04 14.3 0.2 0.046 14.1 0.2 1.1 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region Ldh_1_N PF00056.23 NODE_86658_length_185_cov_1.146667_g78717_i0forward_frame_1 - 7.3e-12 45.6 0.1 7.9e-12 45.5 0.1 1.0 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain PriCT_1 PF08708.11 NODE_86651_length_185_cov_1.160000_g78710_i0reverse_frame_1 - 0.1 12.4 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) FAD_oxidored PF12831.7 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 8.6e-08 31.9 0.2 1e-07 31.7 0.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 4.5e-07 29.4 0.2 5.1e-07 29.2 0.2 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 2.9e-06 26.6 0.2 3.1e-06 26.5 0.2 1.0 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 5.6e-05 22.4 0.1 6.4e-05 22.2 0.1 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 5.7e-05 22.0 0.1 6.4e-05 21.8 0.1 1.0 1 0 0 1 1 1 1 HI0933-like protein NAD_binding_8 PF13450.6 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.00021 21.4 0.2 0.00026 21.1 0.2 1.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.00025 20.4 0.1 0.0003 20.1 0.1 1.0 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.0012 18.1 0.1 0.0012 18.1 0.1 1.0 1 0 0 1 1 1 1 Thi4 family AlaDh_PNT_C PF01262.21 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.011 15.0 0.0 0.012 15.0 0.0 1.0 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.025 14.2 0.2 0.027 14.0 0.2 1.0 1 0 0 1 1 1 0 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.068 12.2 0.1 0.079 12.0 0.1 1.0 1 0 0 1 1 1 0 Lycopene cyclase protein Pyr_redox_3 PF13738.6 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.073 12.3 0.1 0.083 12.1 0.1 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase UPF0227 PF05728.12 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.11 12.4 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) DUF717 PF05338.12 NODE_86641_length_185_cov_1.180000_g78700_i0reverse_frame_1 - 0.019 15.1 0.6 0.025 14.7 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF717) L_protein_N PF15518.6 NODE_86639_length_185_cov_1.193333_g78698_i0reverse_frame_1 - 0.035 13.9 0.1 0.053 13.4 0.1 1.3 1 0 0 1 1 1 0 L protein N-terminus Tubulin_3 PF14881.6 NODE_86638_length_185_cov_1.200000_g78697_i0reverse_frame_1 - 0.18 11.5 0.0 0.19 11.4 0.0 1.0 1 0 0 1 1 1 0 Tubulin domain zf-C3HC4_3 PF13920.6 NODE_86637_length_185_cov_1.200000_g78696_i0reverse_frame_1 - 0.045 13.6 9.4 0.071 13.0 9.4 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Metallothi_Euk2 PF12809.7 NODE_86637_length_185_cov_1.200000_g78696_i0forward_frame_1 - 0.096 13.0 21.3 1.1 9.6 3.2 3.0 1 1 2 3 3 3 0 Eukaryotic metallothionein Pico_P2A PF00947.19 NODE_86637_length_185_cov_1.200000_g78696_i0forward_frame_1 - 2.4 8.2 20.4 5.2 7.1 1.8 3.1 1 1 2 3 3 3 0 Picornavirus core protein 2A zf-C2H2_11 PF16622.5 NODE_86637_length_185_cov_1.200000_g78696_i0forward_frame_1 - 2.5 7.9 13.0 11 5.9 0.6 3.3 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-ISL3 PF14690.6 NODE_86637_length_185_cov_1.200000_g78696_i0forward_frame_1 - 5.6 7.7 19.9 6 7.6 6.8 2.9 1 1 2 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Fibrillin_U_N PF18193.1 NODE_86636_length_185_cov_1.200000_g78695_i0forward_frame_1 - 0.53 10.4 2.6 6.9 6.9 0.4 2.9 2 1 1 3 3 3 0 Fibrillin 1 unique N-terminal domain FhuF_C PF11575.8 NODE_86625_length_185_cov_1.240000_g78684_i0forward_frame_1 - 7 6.7 10.4 8.9 6.4 2.5 2.4 3 0 0 3 3 3 0 FhuF 2Fe-2S C-terminal domain BPL_LplA_LipB PF03099.19 NODE_86607_length_185_cov_1.273333_g78666_i0reverse_frame_1 - 0.001 19.0 0.0 0.0011 18.9 0.0 1.1 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family C8 PF08742.11 NODE_86601_length_185_cov_1.306667_g78660_i0reverse_frame_1 - 0.0038 17.6 0.3 0.0047 17.3 0.3 1.1 1 0 0 1 1 1 1 C8 domain DUF515 PF04415.12 NODE_86599_length_185_cov_1.320000_g78658_i0reverse_frame_1 - 0.8 8.0 2.5 0.84 8.0 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) SK_channel PF03530.14 NODE_86598_length_185_cov_1.326667_g78657_i0forward_frame_1 - 0.019 14.9 0.1 0.021 14.8 0.1 1.0 1 0 0 1 1 1 0 Calcium-activated SK potassium channel RE_AspBHI_N PF18062.1 NODE_86598_length_185_cov_1.326667_g78657_i0forward_frame_1 - 0.061 12.9 0.1 0.061 12.9 0.1 1.1 1 0 0 1 1 1 0 Restriction endonuclease AspBHI N-terminal ADAM_CR_2 PF17771.1 NODE_86597_length_185_cov_1.326667_g78656_i0forward_frame_1 - 0.031 14.8 1.0 0.039 14.5 1.0 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich domain vATP-synt_AC39 PF01992.16 NODE_86594_length_185_cov_1.326667_g78653_i0forward_frame_1 - 0.053 13.0 0.1 0.064 12.7 0.1 1.0 1 0 0 1 1 1 0 ATP synthase (C/AC39) subunit APC_u13 PF16634.5 NODE_86592_length_185_cov_1.326667_g78651_i0reverse_frame_1 - 0.13 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on APC between APC_crr and SAMP Toxin_38 PF14866.6 NODE_86585_length_185_cov_1.333333_g78644_i0forward_frame_1 - 0.042 14.1 0.0 0.046 14.0 0.0 1.2 1 0 0 1 1 1 0 Potassium channel toxin Cytochrom_C_asm PF01578.20 NODE_86578_length_185_cov_1.333333_g78637_i0forward_frame_1 - 0.097 12.4 0.6 0.12 12.1 0.6 1.1 1 0 0 1 1 1 0 Cytochrome C assembly protein DUF4818 PF16089.5 NODE_86577_length_185_cov_1.333333_g78636_i0reverse_frame_1 - 0.036 14.5 0.0 0.038 14.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) MC1 PF05854.11 NODE_86573_length_185_cov_1.360000_g78632_i0forward_frame_1 - 0.065 13.5 1.0 0.079 13.3 0.5 1.5 1 1 0 1 1 1 0 Non-histone chromosomal protein MC1 WES_acyltransf PF03007.16 NODE_86571_length_185_cov_1.366667_g78630_i0forward_frame_1 - 0.0069 16.2 0.0 0.0069 16.2 0.0 1.0 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain MRP-S25 PF13741.6 NODE_86565_length_185_cov_1.420000_g78624_i0forward_frame_1 - 0.11 12.0 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein S25 RVT_2 PF07727.14 NODE_86564_length_185_cov_1.433333_g78623_i0reverse_frame_1 - 1.2e-05 25.1 0.0 1.3e-05 25.0 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) HCMVantigenic_N PF12154.8 NODE_86562_length_185_cov_1.446667_g78621_i0reverse_frame_1 - 0.069 13.3 5.2 0.069 13.3 5.2 2.5 1 1 1 2 2 2 0 Glycoprotein B N-terminal antigenic domain of HCMV ABC_membrane PF00664.23 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.00036 20.3 4.2 0.00041 20.1 4.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region CBP_BcsG PF11658.8 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.0013 17.3 2.3 0.0014 17.1 2.3 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG Halogen_Hydrol PF10112.9 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.0028 17.7 0.4 0.0031 17.5 0.4 1.0 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein Nucleoside_tran PF01733.18 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.01 15.2 2.6 0.011 15.2 2.6 1.0 1 0 0 1 1 1 0 Nucleoside transporter EphA2_TM PF14575.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.014 16.3 9.9 0.078 13.9 9.9 1.9 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Wzy_C PF04932.15 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.016 14.9 5.1 0.017 14.8 5.1 1.0 1 0 0 1 1 1 0 O-Antigen ligase Pex24p PF06398.11 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.02 13.9 1.1 0.023 13.7 1.1 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin AgrB PF04647.15 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.035 13.4 14.3 0.048 13.0 14.3 1.2 1 0 0 1 1 1 0 Accessory gene regulator B OSTbeta PF15048.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.079 13.1 1.6 0.084 13.0 1.6 1.2 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein Shisa PF13908.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.08 13.2 4.1 0.11 12.8 4.1 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF2615 PF11027.8 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.1 12.8 7.0 0.36 11.0 7.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) GRP PF07172.11 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.19 12.4 0.2 0.19 12.4 0.2 1.7 1 1 1 2 2 2 0 Glycine rich protein family O-antigen_lig PF13425.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.21 10.4 15.7 0.24 10.1 15.7 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3488 PF11992.8 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.24 10.3 0.0 0.25 10.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) YMF19 PF02326.15 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.57 11.0 7.1 0.67 10.8 7.1 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 TMEM154 PF15102.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 2.1 8.2 17.2 13 5.7 17.2 1.9 1 1 0 1 1 1 0 TMEM154 protein family RSN1_TM PF13967.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 2.3 8.0 10.7 4 7.2 10.7 1.5 1 1 0 1 1 1 0 Late exocytosis, associated with Golgi transport OAD_gamma PF04277.13 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 2.5 8.8 16.0 22 5.7 16.0 1.9 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Herpes_LMP1 PF05297.11 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 4.2 6.5 4.4 4.7 6.3 4.4 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF4834 PF16118.5 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 9.3 7.3 23.6 36 5.4 23.6 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) RseC_MucC PF04246.12 NODE_86550_length_185_cov_1.500000_g78609_i0reverse_frame_1 - 0.37 10.7 3.4 0.45 10.5 3.4 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Totivirus_coat PF05518.11 NODE_86547_length_185_cov_1.513333_g78606_i0reverse_frame_1 - 0.1 10.7 0.1 0.11 10.5 0.1 1.0 1 0 0 1 1 1 0 Totivirus coat protein DUF4466 PF14725.6 NODE_86547_length_185_cov_1.513333_g78606_i0forward_frame_1 - 0.016 14.7 0.0 0.016 14.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4466) Apolipo_F PF15148.6 NODE_86545_length_185_cov_1.520000_g78604_i0reverse_frame_1 - 0.087 12.3 0.8 0.09 12.3 0.8 1.0 1 0 0 1 1 1 0 Apolipoprotein F DUF2019 PF09450.10 NODE_86544_length_185_cov_1.526667_g78603_i0forward_frame_1 - 0.11 12.4 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2019) CaM_bdg_C0 PF10562.9 NODE_86503_length_185_cov_1.600000_g78562_i0forward_frame_1 - 0.029 14.4 0.1 0.046 13.8 0.1 1.3 1 0 0 1 1 1 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit DUF5494 PF17598.2 NODE_86493_length_185_cov_1.606667_g78552_i0forward_frame_1 - 0.03 14.4 0.0 0.034 14.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5494) LPD18 PF18832.1 NODE_86486_length_185_cov_1.660000_g78545_i0reverse_frame_1 - 0.048 13.7 0.0 0.057 13.5 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 18 OKR_DC_1_N PF03709.15 NODE_86480_length_185_cov_1.693333_g78539_i0forward_frame_1 - 0.016 15.5 0.0 0.016 15.4 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain HMMR_N PF15905.5 NODE_86476_length_185_cov_1.733333_g78535_i0reverse_frame_1 - 0.0052 16.3 3.8 0.0057 16.2 3.8 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Tup_N PF08581.10 NODE_86476_length_185_cov_1.733333_g78535_i0reverse_frame_1 - 0.026 14.8 7.5 0.034 14.4 7.5 1.2 1 0 0 1 1 1 0 Tup N-terminal DUF2313 PF10076.9 NODE_86476_length_185_cov_1.733333_g78535_i0reverse_frame_1 - 0.038 13.8 0.2 0.049 13.5 0.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2313) TTL PF03133.15 NODE_86471_length_185_cov_1.760000_g78530_i0reverse_frame_1 - 4.5e-23 81.8 0.5 4.9e-23 81.7 0.5 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_86471_length_185_cov_1.760000_g78530_i0reverse_frame_1 - 0.14 11.4 0.1 0.16 11.2 0.1 1.0 1 0 0 1 1 1 0 YheC/D like ATP-grasp Nramp PF01566.18 NODE_86469_length_185_cov_1.760000_g78528_i0forward_frame_1 - 0.003 16.6 0.1 0.003 16.6 0.1 1.0 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein CorC_HlyC PF03471.17 NODE_86466_length_185_cov_1.786667_g78525_i0reverse_frame_1 - 2.5e-17 62.6 0.0 2.7e-17 62.6 0.0 1.0 1 0 0 1 1 1 1 Transporter associated domain DUF5422 PF17459.2 NODE_86460_length_185_cov_1.826667_g78519_i0forward_frame_1 - 0.038 14.2 5.4 0.04 14.1 5.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5422) Viral_DNA_bp PF00747.17 NODE_86453_length_185_cov_1.866667_g78512_i0forward_frame_1 - 0.26 8.4 0.8 0.29 8.2 0.8 1.0 1 0 0 1 1 1 0 ssDNA binding protein Alpha-mann_mid PF09261.11 NODE_86451_length_185_cov_1.866667_g78510_i0reverse_frame_1 - 8.3e-10 38.7 0.0 9.1e-10 38.6 0.0 1.0 1 0 0 1 1 1 1 Alpha mannosidase middle domain Cadherin PF00028.17 NODE_86446_length_185_cov_1.920000_g78505_i0reverse_frame_1 - 2.3e-08 34.3 0.1 2.5e-08 34.3 0.1 1.0 1 0 0 1 1 1 1 Cadherin domain Transglut_core2 PF13369.6 NODE_86443_length_185_cov_1.933333_g78502_i0forward_frame_1 - 0.00019 21.1 0.0 0.0002 20.9 0.0 1.1 1 0 0 1 1 1 1 Transglutaminase-like superfamily STAT1_TAZ2bind PF12162.8 NODE_86443_length_185_cov_1.933333_g78502_i0forward_frame_1 - 0.063 12.9 0.2 0.063 12.9 0.2 1.6 2 0 0 2 2 2 0 STAT1 TAZ2 binding domain GIT_SHD PF08518.11 NODE_86443_length_185_cov_1.933333_g78502_i0forward_frame_1 - 0.15 11.7 3.3 0.17 11.6 0.3 2.3 3 0 0 3 3 3 0 Spa2 homology domain (SHD) of GIT R_equi_Vir PF05526.11 NODE_86436_length_185_cov_2.000000_g78495_i0forward_frame_1 - 0.1 12.4 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Rhodococcus equi virulence-associated protein RVT_2 PF07727.14 NODE_86424_length_185_cov_2.120000_g78483_i0reverse_frame_1 - 7.5e-05 22.5 0.0 7.8e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) UL11 PF11094.8 NODE_86424_length_185_cov_2.120000_g78483_i0forward_frame_1 - 0.042 13.7 0.1 0.06 13.2 0.1 1.2 1 0 0 1 1 1 0 Membrane-associated tegument protein NiFe_hyd_SSU_C PF14720.6 NODE_86424_length_185_cov_2.120000_g78483_i0forward_frame_1 - 0.055 13.8 0.0 0.071 13.5 0.0 1.2 1 0 0 1 1 1 0 NiFe/NiFeSe hydrogenase small subunit C-terminal RE_SinI PF09570.10 NODE_86422_length_185_cov_2.120000_g78481_i0forward_frame_1 - 0.092 12.0 0.0 0.097 11.9 0.0 1.0 1 0 0 1 1 1 0 SinI restriction endonuclease LIME1 PF15332.6 NODE_86417_length_185_cov_2.133333_g78476_i0reverse_frame_1 - 0.052 13.1 0.1 0.059 13.0 0.1 1.0 1 0 0 1 1 1 0 Lck-interacting transmembrane adapter 1 Lyase_1 PF00206.20 NODE_86413_length_185_cov_2.133333_g78472_i0reverse_frame_1 - 3.1e-13 49.8 0.0 3.3e-13 49.7 0.0 1.0 1 0 0 1 1 1 1 Lyase Ubiq-Cytc-red_N PF09165.10 NODE_86410_length_185_cov_2.146667_g78469_i0forward_frame_1 - 0.02 15.8 0.0 0.025 15.4 0.0 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome c reductase 8 kDa, N-terminal Acetyltransf_3 PF13302.7 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 7.9e-08 33.1 0.0 7.9e-08 33.1 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 2.9e-07 30.7 0.0 2.9e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 4.1e-05 23.9 0.0 4.6e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 0.0042 17.2 0.0 0.0051 16.9 0.0 1.1 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_10 PF13673.7 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 0.0091 15.9 0.0 0.0097 15.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 0.15 11.6 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase MNE1 PF13762.6 NODE_86401_length_185_cov_2.206667_g78460_i0reverse_frame_1 - 0.0063 16.5 0.1 0.0065 16.5 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial splicing apparatus component Rho_N PF07498.12 NODE_86400_length_185_cov_2.226667_g78459_i0forward_frame_1 - 0.026 14.5 0.6 0.098 12.6 0.0 1.9 2 0 0 2 2 2 0 Rho termination factor, N-terminal domain FANC_SAP PF18081.1 NODE_86400_length_185_cov_2.226667_g78459_i0forward_frame_1 - 0.077 13.2 0.7 0.12 12.5 0.7 1.4 1 0 0 1 1 1 0 Fanconi anemia-associated nuclease SAP domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks402.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks402.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks402.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks402.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Inhibitor_I36 PF03995.13 NODE_86396_length_185_cov_2.260000_g78455_i0forward_frame_1 - 0.25 11.3 3.4 0.39 10.7 3.4 1.5 1 1 0 1 1 1 0 Peptidase inhibitor family I36 DUF2768 PF10966.8 NODE_86394_length_185_cov_2.280000_g78453_i0reverse_frame_1 - 0.28 11.6 5.5 0.42 11.1 5.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2768) CBP_BcsG PF11658.8 NODE_86394_length_185_cov_2.280000_g78453_i0forward_frame_1 - 0.066 11.6 0.2 0.072 11.5 0.2 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG WEMBL PF05701.11 NODE_86393_length_185_cov_2.280000_g78452_i0reverse_frame_1 - 0.0099 14.6 1.9 0.01 14.6 1.9 1.0 1 0 0 1 1 1 1 Weak chloroplast movement under blue light DUF4577 PF15145.6 NODE_86392_length_185_cov_2.293333_g78451_i0forward_frame_1 - 0.13 12.3 0.7 0.13 12.3 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Trehalose_recp PF06151.13 NODE_86391_length_185_cov_2.306667_g78450_i0forward_frame_1 - 0.013 14.1 1.1 0.013 14.1 1.1 1.0 1 0 0 1 1 1 0 Trehalose receptor IBN_N PF03810.19 NODE_86391_length_185_cov_2.306667_g78450_i0forward_frame_1 - 0.11 12.4 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Importin-beta N-terminal domain Piezo_RRas_bdg PF12166.8 NODE_86390_length_185_cov_2.306667_g78449_i0reverse_frame_1 - 0.2 10.9 1.2 0.22 10.7 1.2 1.0 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain YesK PF14150.6 NODE_86390_length_185_cov_2.306667_g78449_i0forward_frame_1 - 0.052 13.8 0.0 0.058 13.6 0.0 1.1 1 0 0 1 1 1 0 YesK-like protein Spore_YhcN_YlaJ PF09580.10 NODE_86377_length_185_cov_2.433333_g78436_i0forward_frame_1 - 0.12 12.4 3.7 0.15 12.2 3.7 1.1 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KASH_CCD PF14662.6 NODE_86374_length_185_cov_2.486667_g78433_i0forward_frame_1 - 0.002 18.0 0.5 0.002 18.0 0.5 1.0 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DUF3010 PF11215.8 NODE_86374_length_185_cov_2.486667_g78433_i0forward_frame_1 - 0.012 16.0 0.4 0.014 15.7 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3010) DivIC PF04977.15 NODE_86374_length_185_cov_2.486667_g78433_i0forward_frame_1 - 0.013 15.3 0.2 0.015 15.1 0.2 1.1 1 0 0 1 1 1 0 Septum formation initiator TBK1_CCD1 PF18394.1 NODE_86374_length_185_cov_2.486667_g78433_i0forward_frame_1 - 0.016 14.8 0.1 0.016 14.8 0.1 1.0 1 0 0 1 1 1 0 TANK-binding kinase 1 coiled-coil domain 1 V_ATPase_I PF01496.19 NODE_86372_length_185_cov_2.540000_g78431_i0reverse_frame_1 - 0.019 12.9 0.9 0.019 12.9 0.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MCD_N PF17408.2 NODE_86371_length_185_cov_2.560000_g78430_i0reverse_frame_1 - 0.041 14.0 0.1 0.046 13.8 0.1 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain Ca_hom_mod PF14798.6 NODE_86367_length_185_cov_2.606667_g78426_i0reverse_frame_1 - 0.0067 15.6 0.1 0.0071 15.5 0.1 1.0 1 0 0 1 1 1 1 Calcium homeostasis modulator MFS_1 PF07690.16 NODE_86360_length_185_cov_2.746667_g78419_i0forward_frame_1 - 0.00024 20.1 0.2 0.00027 20.0 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily zf-C2H2_4 PF13894.6 NODE_86355_length_185_cov_3.020000_g78414_i0forward_frame_1 - 0.0026 18.5 0.6 0.028 15.2 0.0 2.4 2 1 1 3 3 3 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 NODE_86355_length_185_cov_3.020000_g78414_i0forward_frame_1 - 0.057 13.2 0.2 0.14 11.9 0.1 1.7 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-BED PF02892.15 NODE_86355_length_185_cov_3.020000_g78414_i0forward_frame_1 - 0.29 11.2 2.4 0.21 11.6 0.8 1.7 2 0 0 2 2 2 0 BED zinc finger ODV-E18 PF10717.9 NODE_86354_length_185_cov_3.046667_g78413_i0forward_frame_1 - 0.12 12.3 2.5 0.15 11.9 2.5 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Inositol_P PF00459.25 NODE_86349_length_185_cov_3.340000_g78408_i0reverse_frame_1 - 0.088 12.3 0.1 0.092 12.2 0.1 1.0 1 0 0 1 1 1 0 Inositol monophosphatase family HTH_46 PF15977.5 NODE_86349_length_185_cov_3.340000_g78408_i0forward_frame_1 - 0.096 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding DUF4215 PF13948.6 NODE_86347_length_185_cov_3.533333_g78406_i0reverse_frame_1 - 0.00023 21.5 1.6 0.00023 21.5 1.6 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4215) DGC PF08859.11 NODE_86347_length_185_cov_3.533333_g78406_i0reverse_frame_1 - 2.2 8.4 6.8 0.69 10.0 3.2 2.0 2 1 0 2 2 2 0 DGC domain Asp_Glu_race PF01177.22 NODE_86343_length_185_cov_3.940000_g78402_i0forward_frame_1 - 9.6e-08 32.1 0.0 1.1e-07 32.0 0.0 1.0 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase DUF3760 PF12586.8 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_1 - 0.033 14.4 2.2 6 7.1 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3760) LRR_5 PF13306.6 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_1 - 0.041 13.8 0.1 0.047 13.7 0.1 1.1 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) Glyoxalase_2 PF12681.7 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_1 - 0.042 13.8 0.7 0.14 12.1 0.5 1.8 1 1 0 1 1 1 0 Glyoxalase-like domain DUF2644 PF10841.8 NODE_86341_length_185_cov_4.406667_g78400_i0forward_frame_1 - 0.07 13.4 1.1 1.9 8.8 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2644) DUF639 PF04842.12 NODE_86341_length_185_cov_4.406667_g78400_i0forward_frame_1 - 0.15 11.4 0.1 0.17 11.3 0.1 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) GP3 PF03076.14 NODE_86329_length_185_cov_21.826667_g78388_i0forward_frame_1 - 0.028 14.5 0.4 0.028 14.5 0.4 1.1 1 0 0 1 1 1 0 Equine arteritis virus GP3 CENP-O PF09496.10 NODE_86320_length_185_cov_26.966667_g78379_i0reverse_frame_1 - 0.057 13.4 0.0 0.057 13.4 0.0 1.0 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component DUF4357 PF14267.6 NODE_86317_length_185_cov_29.246667_g78376_i0reverse_frame_1 - 0.76 9.8 2.5 5.8 6.9 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4357) TcdB_N PF12918.7 NODE_86306_length_185_cov_38.533333_g78365_i0forward_frame_1 - 0.11 12.8 0.0 0.27 11.6 0.0 1.6 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain HTH_43 PF09904.9 NODE_86303_length_185_cov_39.953333_g78362_i0forward_frame_1 - 0.013 15.4 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix DUF5495 PF17599.2 NODE_86300_length_185_cov_40.546667_g78359_i0forward_frame_1 - 0.02 15.2 0.1 0.02 15.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5495) EF-hand_1 PF00036.32 NODE_86300_length_185_cov_40.546667_g78359_i0forward_frame_1 - 0.03 13.9 0.1 0.066 12.8 0.1 1.6 2 0 0 2 2 2 0 EF hand EF-hand_8 PF13833.6 NODE_86300_length_185_cov_40.546667_g78359_i0forward_frame_1 - 0.13 12.2 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain pair Cadherin_tail PF15974.5 NODE_86283_length_185_cov_63.360000_g78342_i0reverse_frame_1 - 0.024 15.0 1.0 0.026 14.9 1.0 1.0 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region Ribos_L4_asso_C PF14374.6 NODE_86281_length_185_cov_64.880000_g78340_i0reverse_frame_1 - 0.071 13.2 1.3 0.097 12.7 1.3 1.4 1 1 0 1 1 1 0 60S ribosomal protein L4 C-terminal domain Vpu PF00558.19 NODE_86280_length_185_cov_65.200000_g78339_i0reverse_frame_1 - 0.55 10.0 6.1 0.39 10.5 5.0 1.3 1 1 0 1 1 1 0 Vpu protein APOBEC1 PF18769.1 NODE_86275_length_185_cov_68.993333_g78334_i0forward_frame_1 - 0.11 12.7 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 APOBEC1 RPT PF13446.6 NODE_86266_length_185_cov_80.106667_g78325_i0forward_frame_1 - 0.14 12.1 0.1 0.16 11.9 0.1 1.1 1 0 0 1 1 1 0 A repeated domain in UCH-protein AP3D1 PF06375.11 NODE_86260_length_185_cov_101.713333_g78319_i0forward_frame_1 - 3.1 8.0 12.0 3.5 7.8 12.0 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 N6_Mtase PF02384.16 NODE_86251_length_185_cov_233.313333_g78310_i0reverse_frame_1 - 0.098 11.9 0.1 0.1 11.8 0.1 1.0 1 0 0 1 1 1 0 N-6 DNA Methylase UcrQ PF02939.16 NODE_86246_length_185_cov_303.193333_g78305_i0forward_frame_1 - 0.095 12.6 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 UcrQ family Glyco_hydro_31 PF01055.26 NODE_86244_length_185_cov_442.633333_g78303_i0reverse_frame_1 - 8.8e-06 25.2 0.0 8.8e-06 25.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Ammonium_transp PF00909.21 NODE_86241_length_185_cov_15186.153333_g78300_i0reverse_frame_1 - 9.1e-08 31.2 0.0 9.3e-08 31.2 0.0 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Gp_dh_C PF02800.20 NODE_86240_length_185_cov_16706.220000_g78299_i0forward_frame_1 - 2e-15 56.7 0.0 2.1e-15 56.6 0.0 1.0 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WD40 PF00400.32 NODE_86237_length_186_cov_0.774834_g78296_i0reverse_frame_1 - 1.3e-10 41.7 0.0 1.3e-09 38.5 0.0 1.9 2 0 0 2 2 2 1 WD domain, G-beta repeat Ge1_WD40 PF16529.5 NODE_86237_length_186_cov_0.774834_g78296_i0reverse_frame_1 - 0.0032 16.5 0.0 0.0034 16.4 0.0 1.0 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 NODE_86237_length_186_cov_0.774834_g78296_i0reverse_frame_1 - 0.0075 16.5 0.0 0.0078 16.5 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 NODE_86237_length_186_cov_0.774834_g78296_i0reverse_frame_1 - 0.14 11.4 0.0 0.16 11.3 0.0 1.0 1 0 0 1 1 1 0 WD40-like domain DUF4024 PF13216.6 NODE_86233_length_186_cov_0.854305_g78292_i0reverse_frame_1 - 2 8.4 7.2 6.7 6.8 1.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF4024) OGFr_III PF04680.13 NODE_86227_length_186_cov_0.907285_g78286_i0reverse_frame_1 - 0.033 14.8 0.1 0.05 14.2 0.1 1.3 1 0 0 1 1 1 0 Opioid growth factor receptor repeat TrkA_TMD PF18613.1 NODE_86222_length_186_cov_0.947020_g78281_i0forward_frame_1 - 0.019 14.4 1.3 0.027 13.9 1.3 1.3 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain Lamprin PF06403.11 NODE_86221_length_186_cov_0.947020_g78280_i0reverse_frame_1 - 0.00077 19.4 7.2 0.0017 18.3 7.2 1.6 1 1 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_86218_length_186_cov_0.973510_g78277_i0forward_frame_1 - 0.25 11.3 9.3 1.7 8.6 9.3 1.9 1 1 0 1 1 1 0 Lamprin Pectate_lyase_3 PF12708.7 NODE_86214_length_186_cov_0.986755_g78273_i0forward_frame_1 - 0.1 12.5 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 Pectate lyase superfamily protein Caudo_TAP PF02413.17 NODE_86212_length_186_cov_0.993377_g78271_i0forward_frame_1 - 0.00013 22.1 0.1 0.00015 21.9 0.1 1.1 1 0 0 1 1 1 1 Caudovirales tail fibre assembly protein, lambda gpK RAM PF15320.6 NODE_86211_length_186_cov_0.993377_g78270_i0forward_frame_1 - 0.097 13.3 0.0 0.098 13.3 0.0 1.1 1 0 0 1 1 1 0 mRNA cap methylation, RNMT-activating mini protein PheRS_DBD2 PF18554.1 NODE_86210_length_186_cov_1.006623_g78269_i0reverse_frame_1 - 1.7 8.7 7.6 3.8 7.6 1.7 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Antimicrobial18 PF08130.11 NODE_86209_length_186_cov_1.006623_g78268_i0forward_frame_1 - 0.0064 16.5 2.7 0.0069 16.4 1.4 1.7 2 0 0 2 2 2 1 Type A lantibiotic family UPF0061 PF02696.14 NODE_86208_length_186_cov_1.006623_g78267_i0reverse_frame_1 - 0.1 11.4 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family Thiolase_C PF02803.18 NODE_86190_length_186_cov_1.052980_g78249_i0reverse_frame_1 - 0.00014 21.5 0.0 0.00015 21.4 0.0 1.1 1 0 0 1 1 1 1 Thiolase, C-terminal domain DBD_Tnp_Hermes PF10683.9 NODE_86185_length_186_cov_1.052980_g78244_i0forward_frame_1 - 0.14 11.8 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Hermes transposase DNA-binding domain Fer4_23 PF18009.1 NODE_86172_length_186_cov_1.052980_g78231_i0forward_frame_1 - 0.067 13.6 0.1 0.079 13.4 0.1 1.1 1 0 0 1 1 1 0 4Fe-4S iron-sulfur cluster binding domain DDT PF02791.17 NODE_86171_length_186_cov_1.052980_g78230_i0reverse_frame_1 - 0.017 15.4 0.1 0.031 14.6 0.1 1.5 1 1 0 1 1 1 0 DDT domain Hydrophob_seed PF14547.6 NODE_86161_length_186_cov_1.059603_g78220_i0forward_frame_1 - 0.051 13.8 0.1 0.059 13.6 0.1 1.3 1 1 0 1 1 1 0 Hydrophobic seed protein CxC2 PF18803.1 NODE_86161_length_186_cov_1.059603_g78220_i0forward_frame_1 - 0.11 12.7 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases DUF4807 PF16065.5 NODE_86159_length_186_cov_1.059603_g78218_i0reverse_frame_1 - 0.12 12.0 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4807) DUF434 PF04256.12 NODE_86158_length_186_cov_1.059603_g78217_i0forward_frame_1 - 0.09 12.5 0.5 0.14 11.9 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF434) BC10 PF06726.12 NODE_86153_length_186_cov_1.059603_g78212_i0forward_frame_1 - 0.037 14.2 0.0 0.046 14.0 0.0 1.1 1 0 0 1 1 1 0 Bladder cancer-related protein BC10 DUF4735 PF15882.5 NODE_86138_length_186_cov_1.059603_g78197_i0forward_frame_1 - 0.15 11.5 0.1 0.14 11.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4735) Prok-E2_C PF14459.6 NODE_86134_length_186_cov_1.059603_g78193_i0forward_frame_1 - 0.07 13.3 0.1 0.072 13.2 0.1 1.0 1 0 0 1 1 1 0 Prokaryotic E2 family C ScdA_N PF04405.14 NODE_86129_length_186_cov_1.059603_g78188_i0forward_frame_1 - 0.18 11.5 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) Mfp-3 PF04202.13 NODE_86124_length_186_cov_1.059603_g78183_i0forward_frame_1 - 0.41 11.1 5.4 0.5 10.8 5.4 1.1 1 0 0 1 1 1 0 Foot protein 3 PapA_C PF16911.5 NODE_86095_length_186_cov_1.079470_g78154_i0forward_frame_1 - 0.13 12.3 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus F-box-like PF12937.7 NODE_86085_length_186_cov_1.105960_g78144_i0forward_frame_1 - 0.021 14.7 0.6 0.028 14.3 0.6 1.2 1 0 0 1 1 1 0 F-box-like BES1_N PF05687.13 NODE_86083_length_186_cov_1.119205_g78142_i0reverse_frame_1 - 0.43 11.0 6.8 0.7 10.3 6.8 1.3 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal BRD4_CDT PF17105.5 NODE_86083_length_186_cov_1.119205_g78142_i0reverse_frame_1 - 3.8 7.2 9.7 1.4 8.6 7.3 1.6 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 DUF4407 PF14362.6 NODE_86065_length_186_cov_1.198675_g78124_i0reverse_frame_1 - 0.2 11.0 1.7 0.23 10.8 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF2576 PF10845.8 NODE_86064_length_186_cov_1.198675_g78123_i0reverse_frame_1 - 0.16 11.6 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) GSK-3_bind PF05350.12 NODE_86064_length_186_cov_1.198675_g78123_i0forward_frame_1 - 0.028 13.8 0.1 0.028 13.8 0.1 1.0 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding Chordopox_G3 PF06129.12 NODE_86060_length_186_cov_1.211921_g78119_i0forward_frame_1 - 0.0063 17.2 0.4 0.0073 17.0 0.4 1.1 1 0 0 1 1 1 1 Chordopoxvirus G3 protein Ephrin_rec_like PF07699.13 NODE_86042_length_186_cov_1.251656_g78101_i0forward_frame_1 - 0.056 13.2 2.5 0.081 12.7 1.5 1.8 2 0 0 2 2 2 0 Putative ephrin-receptor like Mo-co_dimer PF03404.16 NODE_86018_length_186_cov_1.311258_g78077_i0forward_frame_1 - 0.12 12.3 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 Mo-co oxidoreductase dimerisation domain NDUFV3 PF15880.5 NODE_86017_length_186_cov_1.317881_g78076_i0reverse_frame_1 - 0.03 14.3 1.6 0.042 13.9 0.4 1.8 2 0 0 2 2 2 0 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial Mg296 PF09644.10 NODE_86016_length_186_cov_1.317881_g78075_i0reverse_frame_1 - 0.0033 17.6 0.8 0.0035 17.5 0.8 1.0 1 0 0 1 1 1 1 Mg296 protein DUF1385 PF07136.11 NODE_86012_length_186_cov_1.324503_g78071_i0reverse_frame_1 - 0.023 14.0 0.3 0.028 13.7 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) zf-C3HC4_3 PF13920.6 NODE_85992_length_186_cov_1.390728_g78051_i0forward_frame_1 - 4.5 7.2 11.8 2.1 8.2 3.5 2.2 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) gp45-slide_C PF09116.10 NODE_85991_length_186_cov_1.390728_g78050_i0reverse_frame_1 - 0.042 13.9 0.3 0.049 13.7 0.3 1.1 1 0 0 1 1 1 0 gp45 sliding clamp, C terminal Tristanin_u2 PF16638.5 NODE_85983_length_186_cov_1.417219_g78042_i0forward_frame_1 - 0.23 12.3 2.1 0.31 11.9 2.1 1.2 1 0 0 1 1 1 0 Unstructured region on methyltransferase between zinc-fingers TRP PF06011.12 NODE_85974_length_186_cov_1.456954_g78033_i0forward_frame_1 - 0.0087 14.8 4.0 0.0096 14.7 4.0 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF3755 PF12579.8 NODE_85974_length_186_cov_1.456954_g78033_i0forward_frame_1 - 0.044 13.4 0.0 0.076 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3755) Pox_A32 PF04665.12 NODE_85973_length_186_cov_1.463576_g78032_i0reverse_frame_1 - 0.0083 15.6 0.0 0.009 15.5 0.0 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein MFS_1 PF07690.16 NODE_85972_length_186_cov_1.463576_g78031_i0forward_frame_1 - 0.00093 18.2 0.5 0.00099 18.1 0.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily RPN1_RPN2_N PF17781.1 NODE_85971_length_186_cov_1.470199_g78030_i0reverse_frame_1 - 3.3e-18 66.1 0.0 3.8e-18 66.0 0.0 1.0 1 0 0 1 1 1 1 RPN1/RPN2 N-terminal domain Nairovirus_M PF07948.11 NODE_85970_length_186_cov_1.470199_g78029_i0forward_frame_1 - 0.55 8.4 6.6 0.58 8.3 6.6 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like PetN PF03742.14 NODE_85969_length_186_cov_1.483444_g78028_i0reverse_frame_1 - 0.14 12.0 0.3 2.2 8.2 0.1 2.1 2 0 0 2 2 2 0 PetN DUF5042 PF16445.5 NODE_85967_length_186_cov_1.496689_g78026_i0reverse_frame_1 - 0.14 10.5 0.0 0.14 10.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5042) Neuropep_like PF15161.6 NODE_85942_length_186_cov_1.582781_g78001_i0reverse_frame_1 - 0.061 13.0 0.1 0.069 12.8 0.1 1.2 1 0 0 1 1 1 0 Neuropeptide-like DUF1053 PF06327.14 NODE_85939_length_186_cov_1.582781_g77998_i0forward_frame_1 - 0.14 12.7 6.0 0.15 12.7 6.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1053) ArgoL1 PF08699.10 NODE_85934_length_186_cov_1.582781_g77993_i0reverse_frame_1 - 0.066 12.9 0.0 0.088 12.5 0.0 1.3 1 0 0 1 1 1 0 Argonaute linker 1 domain Ig_6 PF18452.1 NODE_85932_length_186_cov_1.582781_g77991_i0reverse_frame_1 - 0.38 10.4 4.4 0.53 9.9 4.4 1.4 1 1 0 1 1 1 0 Immunoglobulin domain c-SKI_SMAD_bind PF08782.10 NODE_85929_length_186_cov_1.589404_g77988_i0reverse_frame_1 - 0.055 13.7 0.2 0.06 13.6 0.2 1.1 1 0 0 1 1 1 0 c-SKI Smad4 binding domain Mtd_N PF18454.1 NODE_85917_length_186_cov_1.615894_g77976_i0forward_frame_1 - 0.088 12.9 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Major tropism determinant N-terminal domain Uso1_p115_head PF04869.14 NODE_85913_length_186_cov_1.668874_g77972_i0reverse_frame_1 - 0.0013 17.9 0.1 0.0014 17.9 0.1 1.0 1 0 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, head region bcl-2I13 PF12201.8 NODE_85913_length_186_cov_1.668874_g77972_i0forward_frame_1 - 0.054 13.4 0.0 0.057 13.3 0.0 1.0 1 0 0 1 1 1 0 Bcl2-interacting killer, BH3-domain containing zf-MYST PF17772.1 NODE_85908_length_186_cov_1.688742_g77967_i0reverse_frame_1 - 0.025 14.2 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 MYST family zinc finger domain AXIN1_TNKS_BD PF16646.5 NODE_85905_length_186_cov_1.701987_g77964_i0forward_frame_1 - 0.057 14.4 0.3 0.067 14.1 0.3 1.1 1 0 0 1 1 1 0 Axin-1 tankyrase binding domain Polyketide_cyc PF03364.20 NODE_85901_length_186_cov_1.721854_g77960_i0reverse_frame_1 - 1.2e-12 48.1 0.0 1.3e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 NODE_85901_length_186_cov_1.721854_g77960_i0reverse_frame_1 - 0.015 15.5 0.0 0.017 15.4 0.0 1.0 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport DUF4231 PF14015.6 NODE_85898_length_186_cov_1.754967_g77957_i0forward_frame_1 - 0.6 10.6 4.8 2.9 8.4 4.8 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) Notch PF00066.17 NODE_85897_length_186_cov_1.754967_g77956_i0forward_frame_1 - 0.022 15.2 0.3 0.032 14.7 0.3 1.3 1 0 0 1 1 1 0 LNR domain Ephrin_rec_like PF07699.13 NODE_85896_length_186_cov_1.754967_g77955_i0reverse_frame_1 - 0.0035 17.1 0.6 0.0047 16.7 0.6 1.2 1 0 0 1 1 1 1 Putative ephrin-receptor like TMEM252 PF15664.5 NODE_85893_length_186_cov_1.761589_g77952_i0forward_frame_1 - 0.074 12.8 0.4 0.087 12.6 0.4 1.2 1 0 0 1 1 1 0 Transmembrane protein 252 family Barttin PF15462.6 NODE_85887_length_186_cov_1.807947_g77946_i0reverse_frame_1 - 0.12 12.2 2.5 0.12 12.1 2.5 1.0 1 0 0 1 1 1 0 Bartter syndrome, infantile, with sensorineural deafness (Barttin) DNA_pol_E_B PF04042.16 NODE_85881_length_186_cov_1.841060_g77940_i0reverse_frame_1 - 0.025 13.9 0.1 0.025 13.9 0.1 1.0 1 0 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B TK PF00265.18 NODE_85880_length_186_cov_1.847682_g77939_i0reverse_frame_1 - 0.095 12.6 1.5 0.095 12.6 1.5 1.0 1 0 0 1 1 1 0 Thymidine kinase Peptidase_S10 PF00450.22 NODE_85865_length_186_cov_1.947020_g77924_i0forward_frame_1 - 0.064 12.7 0.2 0.064 12.6 0.2 1.0 1 0 0 1 1 1 0 Serine carboxypeptidase Rop PF01815.16 NODE_85863_length_186_cov_1.953642_g77922_i0forward_frame_1 - 0.0079 16.0 0.1 0.0094 15.8 0.1 1.2 1 0 0 1 1 1 1 Rop protein zf-RING_12 PF17976.1 NODE_85863_length_186_cov_1.953642_g77922_i0forward_frame_1 - 0.0097 16.2 0.9 0.012 15.8 0.8 1.3 1 1 0 1 1 1 1 RING/Ubox like zinc-binding domain RhgB_N PF09284.10 NODE_85857_length_186_cov_1.973510_g77916_i0forward_frame_1 - 0.037 13.5 0.1 0.04 13.4 0.1 1.0 1 0 0 1 1 1 0 Rhamnogalacturonan lyase B, N-terminal BLOC1S3 PF15753.5 NODE_85851_length_186_cov_2.006623_g77910_i0forward_frame_1 - 0.066 13.3 0.2 0.066 13.3 0.2 1.0 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 Ribosomal_S27e PF01667.17 NODE_85847_length_186_cov_2.019868_g77906_i0forward_frame_1 - 0.13 11.9 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 Med26 PF08711.11 NODE_85840_length_186_cov_2.086093_g77899_i0reverse_frame_1 - 0.016 15.2 0.1 0.022 14.8 0.1 1.4 1 0 0 1 1 1 0 TFIIS helical bundle-like domain Actin PF00022.19 NODE_85827_length_186_cov_2.145695_g77886_i0reverse_frame_1 - 7.7e-18 64.3 0.0 8.2e-18 64.2 0.0 1.0 1 0 0 1 1 1 1 Actin DUF3824 PF12868.7 NODE_85821_length_186_cov_2.231788_g77880_i0reverse_frame_1 - 0.62 10.7 4.4 0.74 10.5 4.4 1.2 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) TPR_12 PF13424.6 NODE_85817_length_186_cov_2.245033_g77876_i0reverse_frame_1 - 0.0096 16.2 0.2 0.013 15.7 0.2 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat EC042_2821 PF18740.1 NODE_85815_length_186_cov_2.264901_g77874_i0forward_frame_1 - 0.15 12.0 3.0 0.16 11.8 3.0 1.0 1 0 0 1 1 1 0 EC042_2821-lke REase GLTP PF08718.11 NODE_85805_length_186_cov_2.357616_g77864_i0forward_frame_1 - 0.085 13.1 0.1 0.093 13.0 0.1 1.0 1 0 0 1 1 1 0 Glycolipid transfer protein (GLTP) CCD PF07860.11 NODE_85802_length_186_cov_2.377483_g77861_i0reverse_frame_1 - 0.26 11.3 0.9 0.29 11.2 0.9 1.0 1 0 0 1 1 1 0 WisP family C-Terminal Region Spore_III_AF PF09581.10 NODE_85800_length_186_cov_2.403974_g77859_i0forward_frame_1 - 0.084 12.9 0.2 0.091 12.8 0.2 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) DUF3357 PF11837.8 NODE_85797_length_186_cov_2.443709_g77856_i0forward_frame_1 - 0.16 12.4 0.2 0.17 12.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) Deltaretro_Tax PF05599.11 NODE_85795_length_186_cov_2.450331_g77854_i0reverse_frame_1 - 0.083 13.4 0.1 0.1 13.1 0.1 1.1 1 0 0 1 1 1 0 Deltaretrovirus Tax protein RVT_3 PF13456.6 NODE_85786_length_186_cov_2.596026_g77845_i0reverse_frame_1 - 6.2e-08 32.5 0.0 6.3e-08 32.5 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 NODE_85786_length_186_cov_2.596026_g77845_i0reverse_frame_1 - 5.7e-06 26.6 0.0 5.9e-06 26.5 0.0 1.0 1 0 0 1 1 1 1 RNase H Polysacc_synt PF01943.17 NODE_85779_length_186_cov_2.748344_g77838_i0reverse_frame_1 - 0.0018 17.7 0.2 0.002 17.6 0.2 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein FANCI_S1 PF14675.6 NODE_85775_length_186_cov_2.860927_g77834_i0forward_frame_1 - 0.17 11.5 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 FANCI solenoid 1 TB2_DP1_HVA22 PF03134.19 NODE_85770_length_186_cov_2.953642_g77829_i0forward_frame_1 - 0.039 13.9 0.1 0.041 13.8 0.1 1.1 1 0 0 1 1 1 0 TB2/DP1, HVA22 family Drf_GBD PF06371.13 NODE_85770_length_186_cov_2.953642_g77829_i0forward_frame_1 - 0.095 12.3 0.1 0.1 12.1 0.1 1.1 1 0 0 1 1 1 0 Diaphanous GTPase-binding Domain DUF2700 PF10912.8 NODE_85764_length_186_cov_3.119205_g77823_i0reverse_frame_1 - 0.053 13.6 0.1 0.055 13.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2700) AZUL PF16558.5 NODE_85762_length_186_cov_3.483444_g77821_i0forward_frame_1 - 0.039 14.2 0.3 0.053 13.8 0.3 1.2 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A Arc_PepC_II PF06847.11 NODE_85752_length_186_cov_8.589404_g77811_i0reverse_frame_1 - 0.086 13.4 0.1 0.088 13.3 0.1 1.1 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II Nudix_N_2 PF14803.6 NODE_85751_length_186_cov_10.867550_g77810_i0reverse_frame_1 - 0.0086 16.0 0.7 0.013 15.4 0.7 1.2 1 0 0 1 1 1 1 Nudix N-terminal CAP PF00188.26 NODE_85748_length_186_cov_17.152318_g77807_i0forward_frame_1 - 0.19 12.6 0.0 0.25 12.2 0.0 1.3 1 1 0 1 1 1 0 Cysteine-rich secretory protein family zf-RING_UBOX PF13445.6 NODE_85744_length_186_cov_22.198675_g77803_i0forward_frame_1 - 0.0085 16.1 3.6 0.01 15.8 3.6 1.4 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_85744_length_186_cov_22.198675_g77803_i0forward_frame_1 - 0.01 15.8 1.0 0.012 15.6 0.7 1.5 1 1 0 1 1 1 0 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_85744_length_186_cov_22.198675_g77803_i0forward_frame_1 - 0.011 15.6 0.9 0.019 14.9 0.9 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) ALC PF17527.2 NODE_85738_length_186_cov_27.443709_g77797_i0forward_frame_1 - 0.01 15.5 0.3 0.011 15.3 0.3 1.1 1 0 0 1 1 1 1 Phage ALC protein DUF3165 PF11364.8 NODE_85735_length_186_cov_28.437086_g77794_i0forward_frame_1 - 0.087 13.2 1.7 0.22 11.9 1.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3165) Porphyrn_cat_1 PF18206.1 NODE_85730_length_186_cov_31.536424_g77789_i0reverse_frame_1 - 0.031 14.9 0.1 0.037 14.6 0.1 1.1 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 HypA PF01155.19 NODE_85713_length_186_cov_36.980132_g77772_i0forward_frame_1 - 0.046 13.7 0.2 0.056 13.5 0.2 1.0 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TMEM135_C_rich PF15982.5 NODE_85712_length_186_cov_38.000000_g77771_i0forward_frame_1 - 0.055 14.1 0.7 0.061 13.9 0.7 1.0 1 0 0 1 1 1 0 N-terminal cysteine-rich region of Transmembrane protein 135 DUF3681 PF12442.8 NODE_85712_length_186_cov_38.000000_g77771_i0forward_frame_1 - 0.082 13.4 0.0 0.086 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3681) HopA1 PF17914.1 NODE_85698_length_186_cov_48.278146_g77757_i0forward_frame_1 - 0.08 12.7 0.1 0.084 12.6 0.1 1.1 1 0 0 1 1 1 0 HopA1 effector protein family Fun_ATP-synt_8 PF05933.13 NODE_85697_length_186_cov_48.450331_g77756_i0reverse_frame_1 - 0.0062 16.7 1.3 0.0085 16.2 1.3 1.3 1 0 0 1 1 1 1 Fungal ATP synthase protein 8 (A6L) zf-C4pol PF14260.6 NODE_85694_length_186_cov_51.311258_g77753_i0reverse_frame_1 - 0.0058 17.1 0.2 0.0072 16.8 0.2 1.1 1 0 0 1 1 1 1 C4-type zinc-finger of DNA polymerase delta PA26 PF04636.13 NODE_85694_length_186_cov_51.311258_g77753_i0reverse_frame_1 - 0.038 12.9 0.1 0.039 12.9 0.1 1.0 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) IMUP PF15761.5 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_1 - 4.8 7.9 14.6 6 7.6 14.6 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein CCDC24 PF15669.5 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_1 - 9.9 6.0 7.4 12 5.7 7.4 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family SUV3_C PF12513.8 NODE_85692_length_186_cov_55.238411_g77751_i0reverse_frame_1 - 0.13 12.3 0.3 0.66 9.9 0.0 1.9 2 0 0 2 2 2 0 Mitochondrial degradasome RNA helicase subunit C terminal CbiN PF02553.15 NODE_85690_length_186_cov_56.364238_g77749_i0forward_frame_1 - 0.22 11.5 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 Cobalt transport protein component CbiN Dpy-30 PF05186.13 NODE_85686_length_186_cov_66.642384_g77745_i0forward_frame_1 - 0.011 15.5 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 Dpy-30 motif DUF5586 PF17824.1 NODE_85686_length_186_cov_66.642384_g77745_i0forward_frame_1 - 0.062 12.4 0.1 0.065 12.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5586) Rubredoxin_C PF18267.1 NODE_85680_length_186_cov_71.715232_g77739_i0forward_frame_1 - 0.086 12.8 0.2 0.34 10.8 0.2 1.7 2 0 0 2 2 2 0 Rubredoxin NAD+ reductase C-terminal domain Saf_2TM PF18303.1 NODE_85671_length_186_cov_84.304636_g77730_i0reverse_frame_1 - 0.054 13.1 0.1 0.055 13.1 0.1 1.0 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain TPR_12 PF13424.6 NODE_85665_length_186_cov_100.410596_g77724_i0reverse_frame_1 - 0.13 12.5 0.0 0.16 12.3 0.0 1.0 1 0 0 1 1 1 0 Tetratricopeptide repeat SR-25 PF10500.9 NODE_85653_length_186_cov_4498.622517_g77712_i0forward_frame_1 - 0.36 10.4 9.3 0.35 10.5 9.3 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HHV-5_US34A PF17087.5 NODE_85652_length_186_cov_7747.006623_g77711_i0forward_frame_1 - 0.03 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus US34A protein family Atrophin-1 PF03154.15 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.03 12.6 8.1 0.031 12.6 8.1 1.0 1 0 0 1 1 1 0 Atrophin-1 family DRMBL PF07522.14 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.15 12.2 0.7 0.2 11.8 0.7 1.1 1 0 0 1 1 1 0 DNA repair metallo-beta-lactamase DUF3915 PF13054.6 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.15 12.0 6.8 0.19 11.8 6.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) FAM27 PF15832.5 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.17 12.5 6.0 0.23 12.0 6.0 1.2 1 0 0 1 1 1 0 FAM27 D and E protein family DUF3824 PF12868.7 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.44 11.2 5.2 0.47 11.1 5.2 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) DUF3915 PF13054.6 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_2 - 0.045 13.7 3.3 0.048 13.7 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_2 - 1.5 7.0 10.4 1.9 6.7 10.4 1.1 1 0 0 1 1 1 0 Atrophin-1 family LPD22 PF18834.1 NODE_85644_length_187_cov_0.888158_g77703_i0forward_frame_3 - 0.31 11.3 2.7 0.76 10.0 0.1 2.0 1 1 1 2 2 2 0 Large polyvalent protein associated domain 22 Ax_dynein_light PF10211.9 NODE_85642_length_187_cov_0.894737_g77701_i0forward_frame_2 - 4.8 7.1 13.3 5.4 6.9 13.3 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain DUF4029 PF13221.6 NODE_85638_length_187_cov_0.927632_g77697_i0reverse_frame_3 - 0.078 13.6 0.2 0.079 13.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4029) LOB PF03195.14 NODE_85635_length_187_cov_0.947368_g77694_i0forward_frame_3 - 0.018 15.6 0.4 0.028 15.0 0.3 1.5 1 1 1 2 2 2 0 Lateral organ boundaries (LOB) domain SRP_SPB PF02978.19 NODE_85634_length_187_cov_0.947368_g77693_i0reverse_frame_3 - 0.025 15.2 0.0 0.027 15.1 0.0 1.1 1 0 0 1 1 1 0 Signal peptide binding domain YozD PF14162.6 NODE_85634_length_187_cov_0.947368_g77693_i0forward_frame_2 - 0.18 12.2 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 YozD-like protein Lamprin PF06403.11 NODE_85628_length_187_cov_0.973684_g77687_i0forward_frame_2 - 0.13 12.2 11.8 0.35 10.8 4.8 2.0 1 1 1 2 2 2 0 Lamprin Kelch_4 PF13418.6 NODE_85628_length_187_cov_0.973684_g77687_i0forward_frame_2 - 0.17 11.9 1.1 0.24 11.5 1.1 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain Lem_TRP PF08262.11 NODE_85628_length_187_cov_0.973684_g77687_i0forward_frame_2 - 0.29 11.2 1.0 0.29 11.2 1.0 3.3 4 0 0 4 4 4 0 Leucophaea maderae tachykinin-related peptide # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks403.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks403.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks403.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks403.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:30:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF454 PF04304.13 NODE_85618_length_187_cov_1.032895_g77677_i0reverse_frame_3 - 0.06 13.4 0.0 0.068 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF454) FAM176 PF14851.6 NODE_85611_length_187_cov_1.039474_g77670_i0reverse_frame_3 - 0.19 11.4 0.6 0.23 11.1 0.6 1.1 1 0 0 1 1 1 0 FAM176 family DUF1490 PF07371.12 NODE_85604_length_187_cov_1.046053_g77663_i0reverse_frame_3 - 0.046 13.8 0.2 0.056 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) SRTM1 PF15872.5 NODE_85602_length_187_cov_1.046053_g77661_i0reverse_frame_3 - 0.034 14.3 0.9 0.036 14.2 0.9 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 Pkinase PF00069.25 NODE_85598_length_187_cov_1.046053_g77657_i0reverse_frame_3 - 1.5e-14 54.0 0.1 1.6e-14 53.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_85598_length_187_cov_1.046053_g77657_i0reverse_frame_3 - 3e-05 23.4 0.1 3.2e-05 23.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Adipogenin PF15202.6 NODE_85597_length_187_cov_1.046053_g77656_i0forward_frame_2 - 2.3 8.3 6.8 2.8 8.0 6.8 1.3 1 0 0 1 1 1 0 Adipogenin PP2C PF00481.21 NODE_85593_length_187_cov_1.046053_g77652_i0reverse_frame_2 - 5.4e-06 26.2 0.0 5.6e-06 26.2 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Kelch_3 PF13415.6 NODE_85592_length_187_cov_1.046053_g77651_i0forward_frame_3 - 0.045 14.0 0.2 0.057 13.7 0.2 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain CysG_dimeriser PF10414.9 NODE_85591_length_187_cov_1.046053_g77650_i0forward_frame_2 - 0.045 13.5 3.1 0.051 13.3 3.1 1.1 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region RNase_H PF00075.24 NODE_85588_length_187_cov_1.046053_g77647_i0forward_frame_3 - 7.4e-05 23.0 0.0 8.5e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 RNase H Toprim_C_rpt PF13368.6 NODE_85582_length_187_cov_1.052632_g77641_i0forward_frame_3 - 0.013 15.5 0.0 0.016 15.2 0.0 1.1 1 0 0 1 1 1 0 Topoisomerase C-terminal repeat ArsC PF03960.15 NODE_85582_length_187_cov_1.052632_g77641_i0forward_frame_3 - 0.015 15.3 0.3 0.018 15.1 0.3 1.1 1 0 0 1 1 1 0 ArsC family zf-RING_2 PF13639.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 9.4e-15 54.7 9.1 1.2e-14 54.3 9.1 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 3.7e-09 36.2 5.6 3.7e-09 36.2 5.6 1.5 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 7.4e-09 35.5 2.8 2.1e-08 34.1 3.1 1.5 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1e-08 35.0 6.7 1.3e-08 34.6 6.7 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1.5e-08 34.4 8.4 2e-08 33.9 8.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 3.1e-08 33.3 7.5 4.6e-08 32.8 7.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 3.7e-08 33.5 7.3 6.3e-08 32.8 7.3 1.4 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 7.6e-07 29.1 3.0 8.5e-07 28.9 3.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1.2e-05 25.1 6.8 1.7e-05 24.6 6.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1.5e-05 24.8 5.7 2.2e-05 24.2 5.7 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 9.5e-05 21.9 6.9 0.00017 21.1 6.9 1.5 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.0055 16.8 7.2 0.013 15.6 7.2 1.7 1 1 0 1 1 1 1 RING-variant domain Prok-RING_1 PF14446.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.0073 16.2 8.5 0.017 15.0 3.8 2.1 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-Nse PF11789.8 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.0094 15.7 4.0 0.012 15.4 4.0 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Rtf2 PF04641.12 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.027 13.8 4.5 0.15 11.4 4.5 1.8 1 1 0 1 1 1 0 Rtf2 RING-finger zf-RING-like PF08746.11 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.037 14.3 6.7 0.069 13.5 6.7 1.6 1 1 0 1 1 1 0 RING-like domain zf-C3HC4_4 PF15227.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.051 13.7 9.2 0.31 11.2 9.2 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Vps39_2 PF10367.9 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.15 12.5 7.3 0.14 12.7 3.2 2.0 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 2 zf-RING_4 PF14570.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.32 10.8 6.9 0.62 9.9 6.9 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zf_RING PF16744.5 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.35 11.0 6.5 0.54 10.4 6.5 1.4 1 1 0 1 1 1 0 KIAA1045 RING finger FANCL_C PF11793.8 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.38 10.9 8.8 4.4 7.6 8.8 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain PHD PF00628.29 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1.2 9.1 10.0 2.2 8.3 8.7 1.9 1 1 1 2 2 2 0 PHD-finger 5-FTHF_cyc-lig PF01812.20 NODE_85569_length_187_cov_1.052632_g77628_i0reverse_frame_3 - 0.051 13.4 0.1 0.054 13.3 0.1 1.0 1 0 0 1 1 1 0 5-formyltetrahydrofolate cyclo-ligase family Omega-toxin PF06357.11 NODE_85566_length_187_cov_1.052632_g77625_i0forward_frame_3 - 0.063 13.1 0.1 0.084 12.7 0.1 1.2 1 0 0 1 1 1 0 Omega-atracotoxin DUF4668 PF15701.5 NODE_85566_length_187_cov_1.052632_g77625_i0forward_frame_2 - 0.084 12.7 0.1 0.098 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) HicA_toxin PF07927.12 NODE_85561_length_187_cov_1.052632_g77620_i0forward_frame_2 - 0.09 12.8 0.2 0.12 12.4 0.2 1.1 1 0 0 1 1 1 0 HicA toxin of bacterial toxin-antitoxin, PHM7_cyt PF14703.6 NODE_85550_length_187_cov_1.052632_g77609_i0reverse_frame_3 - 0.038 14.2 0.1 0.038 14.2 0.1 1.0 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter TPR_12 PF13424.6 NODE_85545_length_187_cov_1.052632_g77604_i0forward_frame_3 - 0.017 15.4 0.0 0.024 14.9 0.0 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat RT_RNaseH_2 PF17919.1 NODE_85543_length_187_cov_1.052632_g77602_i0forward_frame_2 - 0.12 12.4 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 RNase H-like domain found in reverse transcriptase DUF4818 PF16089.5 NODE_85538_length_187_cov_1.052632_g77597_i0reverse_frame_2 - 0.0096 16.4 0.1 0.0099 16.3 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4818) RL PF17797.1 NODE_85536_length_187_cov_1.052632_g77595_i0reverse_frame_3 - 0.0016 18.4 0.8 0.0019 18.1 0.8 1.2 1 0 0 1 1 1 1 RL domain DUF1290 PF06947.12 NODE_85536_length_187_cov_1.052632_g77595_i0forward_frame_3 - 0.059 13.5 0.2 0.074 13.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1290) BES1_N PF05687.13 NODE_85532_length_187_cov_1.052632_g77591_i0reverse_frame_2 - 0.11 12.9 0.4 0.11 12.9 0.4 1.0 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal MTCP1 PF08991.10 NODE_85531_length_187_cov_1.052632_g77590_i0reverse_frame_2 - 0.069 13.4 1.4 0.099 12.9 1.4 1.2 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type DUF5594 PF18057.1 NODE_85528_length_187_cov_1.052632_g77587_i0forward_frame_3 - 0.1 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5594) MRF_C1 PF13887.6 NODE_85527_length_187_cov_1.052632_g77586_i0forward_frame_2 - 0.08 12.1 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 Myelin gene regulatory factor -C-terminal domain 1 PDE6_gamma PF04868.12 NODE_85520_length_187_cov_1.065789_g77579_i0reverse_frame_2 - 0.013 15.7 2.6 0.015 15.5 2.6 1.2 1 0 0 1 1 1 0 Retinal cGMP phosphodiesterase, gamma subunit DUF2950 PF11453.8 NODE_85518_length_187_cov_1.085526_g77577_i0reverse_frame_3 - 0.1 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2950) DUF2607 PF10795.9 NODE_85518_length_187_cov_1.085526_g77577_i0forward_frame_3 - 0.085 13.0 1.0 0.1 12.8 1.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2607) Sec62 PF03839.16 NODE_85515_length_187_cov_1.098684_g77574_i0reverse_frame_2 - 0.054 13.0 0.1 0.058 12.9 0.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Glycos_transf_2 PF00535.26 NODE_85514_length_187_cov_1.111842_g77573_i0reverse_frame_2 - 0.00042 20.2 0.0 0.00042 20.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 NODE_85514_length_187_cov_1.111842_g77573_i0reverse_frame_2 - 0.05 13.5 0.0 0.05 13.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF4232 PF14016.6 NODE_85513_length_187_cov_1.111842_g77572_i0reverse_frame_3 - 0.049 13.8 0.0 0.054 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4232) Glyco_transf_5 PF08323.11 NODE_85513_length_187_cov_1.111842_g77572_i0forward_frame_2 - 0.15 11.7 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Starch synthase catalytic domain Deltaretro_Tax PF05599.11 NODE_85509_length_187_cov_1.125000_g77568_i0forward_frame_3 - 0.015 15.8 0.5 0.016 15.7 0.5 1.2 1 0 0 1 1 1 0 Deltaretrovirus Tax protein zf-CCHC_6 PF15288.6 NODE_85508_length_187_cov_1.138158_g77567_i0reverse_frame_2 - 0.14 12.0 1.3 0.2 11.5 1.2 1.5 1 1 0 1 1 1 0 Zinc knuckle Macin PF14865.6 NODE_85499_length_187_cov_1.151316_g77558_i0forward_frame_2 - 0.0044 17.5 0.1 0.0044 17.5 0.1 1.7 1 1 1 2 2 2 1 Macin DNA_gyraseA_C PF03989.13 NODE_85498_length_187_cov_1.151316_g77557_i0reverse_frame_2 - 0.081 12.4 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 DNA gyrase C-terminal domain, beta-propeller TEP1_N PF05386.11 NODE_85492_length_187_cov_1.177632_g77551_i0reverse_frame_2 - 0.068 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 TEP1 N-terminal domain Ribosomal_S14 PF00253.21 NODE_85490_length_187_cov_1.184211_g77549_i0reverse_frame_2 - 0.037 13.8 0.1 0.047 13.5 0.1 1.3 1 1 0 1 1 1 0 Ribosomal protein S14p/S29e Get5_bdg PF16843.5 NODE_85486_length_187_cov_1.197368_g77545_i0reverse_frame_3 - 0.17 11.4 1.3 0.34 10.4 1.3 1.5 1 1 0 1 1 1 0 Binding domain to Get4 on Get5, Golgi to ER traffic protein CENP-K PF11802.8 NODE_85486_length_187_cov_1.197368_g77545_i0forward_frame_3 - 0.035 13.7 0.2 0.04 13.5 0.2 1.0 1 0 0 1 1 1 0 Centromere-associated protein K TMEM156 PF15106.6 NODE_85481_length_187_cov_1.223684_g77540_i0forward_frame_3 - 0.076 12.4 1.4 0.075 12.5 1.4 1.1 1 0 0 1 1 1 0 TMEM156 protein family GATA PF00320.27 NODE_85478_length_187_cov_1.230263_g77537_i0forward_frame_3 - 0.096 12.3 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 GATA zinc finger DUF3039 PF11238.8 NODE_85467_length_187_cov_1.296053_g77526_i0reverse_frame_3 - 0.15 11.8 1.2 0.3 10.9 1.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3039) Ost5 PF05251.12 NODE_85462_length_187_cov_1.302632_g77521_i0reverse_frame_3 - 0.027 14.8 3.6 0.045 14.0 3.5 1.6 1 1 0 1 1 1 0 Oligosaccharyltransferase subunit 5 APOBEC_N PF08210.11 NODE_85462_length_187_cov_1.302632_g77521_i0forward_frame_2 - 0.038 13.9 0.4 0.041 13.8 0.4 1.0 1 0 0 1 1 1 0 APOBEC-like N-terminal domain NAD1 PF18778.1 NODE_85462_length_187_cov_1.302632_g77521_i0forward_frame_2 - 0.041 14.0 0.5 0.043 13.9 0.5 1.0 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 Anoctamin PF04547.12 NODE_85455_length_187_cov_1.315789_g77514_i0reverse_frame_2 - 2.2e-05 23.5 0.7 2.3e-05 23.4 0.7 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel DUF3909 PF13077.6 NODE_85450_length_187_cov_1.315789_g77509_i0reverse_frame_2 - 0.026 14.7 0.0 0.028 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3909) DHHC PF01529.20 NODE_85446_length_187_cov_1.315789_g77505_i0reverse_frame_2 - 0.19 11.8 4.8 0.2 11.8 4.8 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF4510 PF14971.6 NODE_85442_length_187_cov_1.348684_g77501_i0forward_frame_2 - 0.03 14.7 0.0 0.032 14.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4510) DUF4158 PF13700.6 NODE_85441_length_187_cov_1.355263_g77500_i0forward_frame_3 - 4.9e-12 46.0 0.0 5.2e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4158) HemY_N PF07219.13 NODE_85438_length_187_cov_1.368421_g77497_i0reverse_frame_3 - 0.45 10.7 1.3 0.55 10.4 1.3 1.1 1 0 0 1 1 1 0 HemY protein N-terminus Exo_endo_phos PF03372.23 NODE_85437_length_187_cov_1.375000_g77496_i0reverse_frame_3 - 0.014 14.9 0.2 0.02 14.4 0.1 1.3 2 0 0 2 2 2 0 Endonuclease/Exonuclease/phosphatase family DUF3836 PF12930.7 NODE_85431_length_187_cov_1.407895_g77490_i0forward_frame_3 - 0.0022 17.7 2.3 0.0026 17.5 2.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF3836) YWFCY PF14293.6 NODE_85430_length_187_cov_1.407895_g77489_i0reverse_frame_3 - 0.19 12.1 1.6 0.19 12.1 0.9 1.4 1 1 0 1 1 1 0 YWFCY protein SMP_2 PF10144.9 NODE_85418_length_187_cov_1.440789_g77477_i0forward_frame_3 - 0.087 12.5 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial virulence factor haemolysin FAM35_C PF15793.5 NODE_85417_length_187_cov_1.447368_g77476_i0reverse_frame_3 - 0.013 14.9 0.0 0.015 14.7 0.0 1.0 1 0 0 1 1 1 0 Protein family FAM35, C-terminal F-box PF00646.33 NODE_85412_length_187_cov_1.467105_g77471_i0reverse_frame_2 - 0.81 9.6 5.0 0.18 11.7 1.4 1.8 1 1 1 2 2 2 0 F-box domain DUF2218 PF09981.9 NODE_85412_length_187_cov_1.467105_g77471_i0forward_frame_2 - 0.0058 17.0 0.0 0.0061 16.9 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2218) ChW PF07538.11 NODE_85406_length_187_cov_1.486842_g77465_i0forward_frame_2 - 0.16 11.9 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Clostridial hydrophobic W SPC12 PF06645.13 NODE_85390_length_187_cov_1.559211_g77449_i0forward_frame_3 - 0.16 12.0 0.3 0.36 10.9 0.0 1.6 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Adeno_E1B_55K_N PF04623.12 NODE_85389_length_187_cov_1.559211_g77448_i0reverse_frame_2 - 0.04 14.6 0.1 0.046 14.4 0.1 1.1 1 0 0 1 1 1 0 Adenovirus E1B protein N-terminus INO80_Ies4 PF08193.11 NODE_85387_length_187_cov_1.565789_g77446_i0reverse_frame_2 - 0.035 14.1 0.3 0.038 14.0 0.3 1.1 1 0 0 1 1 1 0 INO80 complex subunit Ies4 Peptidase_S48 PF03574.15 NODE_85369_length_187_cov_1.578947_g77428_i0forward_frame_2 - 0.035 14.3 0.1 0.037 14.2 0.1 1.1 1 0 0 1 1 1 0 Peptidase family S48 dbPDZ_assoc PF16610.5 NODE_85358_length_187_cov_1.578947_g77417_i0reverse_frame_3 - 0.029 14.6 1.1 0.029 14.6 1.1 1.6 2 0 0 2 2 2 0 Unstructured region between two PDZ domains on Dlg5 Yip1 PF04893.17 NODE_85358_length_187_cov_1.578947_g77417_i0forward_frame_3 - 0.24 11.1 6.7 0.27 10.9 6.7 1.1 1 0 0 1 1 1 0 Yip1 domain NPM1-C PF16276.5 NODE_85355_length_187_cov_1.578947_g77414_i0reverse_frame_2 - 0.07 13.1 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Nucleophosmin C-terminal domain CCDC53 PF10152.9 NODE_85355_length_187_cov_1.578947_g77414_i0reverse_frame_2 - 0.19 12.2 0.1 0.25 11.7 0.1 1.2 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex zinc_ribbon_9 PF14369.6 NODE_85355_length_187_cov_1.578947_g77414_i0forward_frame_3 - 0.079 13.2 2.2 0.11 12.8 2.2 1.2 1 0 0 1 1 1 0 zinc-ribbon Porph_ging PF09697.10 NODE_85351_length_187_cov_1.605263_g77410_i0reverse_frame_2 - 0.072 13.6 0.8 0.08 13.5 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (Porph_ging) MGC-24 PF05283.11 NODE_85350_length_187_cov_1.611842_g77409_i0reverse_frame_2 - 0.35 11.3 4.5 0.38 11.2 4.5 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin PlyB_C PF18684.1 NODE_85342_length_187_cov_1.664474_g77401_i0reverse_frame_3 - 0.046 13.4 0.0 0.046 13.4 0.0 1.2 1 0 0 1 1 1 0 Pleurotolysin B C-terminal domain Dynein_AAA_lid PF17852.1 NODE_85342_length_187_cov_1.664474_g77401_i0forward_frame_2 - 0.041 14.0 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain SapA PF02199.15 NODE_85341_length_187_cov_1.677632_g77400_i0forward_frame_2 - 0.041 14.2 1.1 0.89 9.9 0.2 2.2 2 0 0 2 2 2 0 Saposin A-type domain PAS_9 PF13426.7 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.00029 21.1 0.0 0.00029 21.1 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS_8 PF13188.7 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.00033 20.6 0.0 0.00034 20.5 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.0041 17.1 0.0 0.0047 16.9 0.0 1.2 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.0058 16.9 0.0 0.0058 16.9 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_7 PF12860.7 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.073 13.2 0.0 0.077 13.2 0.0 1.2 1 0 0 1 1 1 0 PAS fold Ogr_Delta PF04606.12 NODE_85334_length_187_cov_1.710526_g77393_i0reverse_frame_3 - 0.12 12.3 1.0 3.7 7.6 0.2 2.1 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger ThiD2 PF17792.1 NODE_85330_length_187_cov_1.730263_g77389_i0forward_frame_3 - 0.15 12.5 2.5 0.15 12.5 2.5 1.1 1 0 0 1 1 1 0 ThiD2 family PKD_3 PF16820.5 NODE_85327_length_187_cov_1.743421_g77386_i0forward_frame_3 - 0.2 11.5 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 PKD-like domain POP1 PF06978.11 NODE_85326_length_187_cov_1.750000_g77385_i0forward_frame_3 - 1.6e-17 64.2 4.0 1.6e-17 64.2 4.0 1.0 1 0 0 1 1 1 1 Ribonucleases P/MRP protein subunit POP1 Ribosomal_L34 PF00468.17 NODE_85313_length_187_cov_1.782895_g77372_i0forward_frame_3 - 3.2e-06 27.0 1.6 4.2e-06 26.6 1.6 1.2 1 0 0 1 1 1 1 Ribosomal protein L34 DUF1617 PF07761.12 NODE_85313_length_187_cov_1.782895_g77372_i0forward_frame_3 - 0.022 14.9 0.2 0.022 14.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1617) Helitron_like_N PF14214.6 NODE_85311_length_187_cov_1.802632_g77370_i0reverse_frame_3 - 0.0062 16.8 0.0 0.0062 16.8 0.0 1.0 1 0 0 1 1 1 1 Helitron helicase-like domain at N-terminus ATPgrasp_N PF18130.1 NODE_85311_length_187_cov_1.802632_g77370_i0reverse_frame_3 - 0.044 14.3 0.0 0.066 13.8 0.0 1.4 1 1 0 1 1 1 0 ATP-grasp N-terminal domain DUF4096 PF13340.6 NODE_85311_length_187_cov_1.802632_g77370_i0forward_frame_2 - 0.014 15.6 0.9 0.024 14.9 0.9 1.4 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) Nucleocap_ssRNA PF11128.8 NODE_85309_length_187_cov_1.815789_g77368_i0reverse_frame_2 - 0.053 13.2 0.0 0.058 13.1 0.0 1.0 1 0 0 1 1 1 0 Plant viral coat protein nucleocapsid Herpes_capsid PF06112.11 NODE_85308_length_187_cov_1.822368_g77367_i0reverse_frame_3 - 0.13 12.4 0.4 0.13 12.4 0.4 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein CAAD PF14159.6 NODE_85308_length_187_cov_1.822368_g77367_i0forward_frame_3 - 0.051 13.4 2.3 0.061 13.2 2.3 1.1 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Glt_symporter PF03616.14 NODE_85304_length_187_cov_1.835526_g77363_i0forward_frame_3 - 0.13 10.9 0.3 0.14 10.8 0.3 1.1 1 0 0 1 1 1 0 Sodium/glutamate symporter GBP_PSP PF02425.15 NODE_85301_length_187_cov_1.842105_g77360_i0forward_frame_3 - 0.15 11.8 0.4 0.15 11.8 0.4 1.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide RCC1_2 PF13540.6 NODE_85296_length_187_cov_1.842105_g77355_i0reverse_frame_3 - 0.024 14.4 2.3 0.051 13.4 2.3 1.5 1 1 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat Pyridoxal_deC PF00282.19 NODE_85293_length_187_cov_1.848684_g77352_i0reverse_frame_3 - 0.00026 19.8 0.1 0.00028 19.7 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain PORR PF11955.8 NODE_85293_length_187_cov_1.848684_g77352_i0reverse_frame_3 - 0.062 12.2 0.1 0.062 12.2 0.1 1.0 1 0 0 1 1 1 0 Plant organelle RNA recognition domain RcpB PF16971.5 NODE_85291_length_187_cov_1.848684_g77350_i0reverse_frame_2 - 0.0068 16.3 0.6 0.007 16.3 0.6 1.0 1 0 0 1 1 1 1 Rough colony protein B, tight adherence - tad - subunit DUF4261 PF14080.6 NODE_85289_length_187_cov_1.868421_g77348_i0forward_frame_2 - 0.12 12.5 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4261) zf-AN1 PF01428.16 NODE_85285_length_187_cov_1.914474_g77344_i0forward_frame_2 - 0.11 12.6 8.0 0.45 10.7 1.0 2.3 2 0 0 2 2 2 0 AN1-like Zinc finger Zn_clus PF00172.18 NODE_85279_length_187_cov_2.013158_g77338_i0reverse_frame_3 - 0.011 15.9 0.4 0.015 15.4 0.4 1.2 1 0 0 1 1 1 0 Fungal Zn(2)-Cys(6) binuclear cluster domain IMUP PF15761.5 NODE_85279_length_187_cov_2.013158_g77338_i0forward_frame_2 - 0.041 14.6 0.4 0.041 14.6 0.4 1.0 1 0 0 1 1 1 0 Immortalisation up-regulated protein eIF3_p135 PF12807.7 NODE_85273_length_187_cov_2.078947_g77332_i0forward_frame_3 - 0.12 12.4 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit 135 DUF4306 PF14154.6 NODE_85272_length_187_cov_2.085526_g77331_i0reverse_frame_3 - 0.15 12.2 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4306) CSS-motif PF12792.7 NODE_85271_length_187_cov_2.092105_g77330_i0reverse_frame_2 - 0.0066 16.0 0.0 0.0066 16.0 0.0 1.0 1 0 0 1 1 1 1 CSS motif domain associated with EAL DUF957 PF06117.11 NODE_85270_length_187_cov_2.092105_g77329_i0reverse_frame_2 - 0.043 13.4 1.1 0.061 12.9 1.1 1.2 1 0 0 1 1 1 0 Enterobacterial protein of unknown function (DUF957) Cupin_4 PF08007.12 NODE_85261_length_187_cov_2.177632_g77320_i0reverse_frame_3 - 1.1e-08 34.9 0.0 1.1e-08 34.9 0.0 1.0 1 0 0 1 1 1 1 Cupin superfamily protein Tup_N PF08581.10 NODE_85261_length_187_cov_2.177632_g77320_i0reverse_frame_3 - 0.012 15.8 0.1 0.015 15.6 0.1 1.1 1 0 0 1 1 1 0 Tup N-terminal PAXNEB PF05625.11 NODE_85261_length_187_cov_2.177632_g77320_i0forward_frame_3 - 0.15 11.1 0.1 0.17 11.0 0.1 1.0 1 0 0 1 1 1 0 PAXNEB protein Glycoprotein_G PF00802.19 NODE_85259_length_187_cov_2.177632_g77318_i0forward_frame_3 - 0.3 10.4 0.7 0.32 10.3 0.7 1.0 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Plus-3 PF03126.18 NODE_85257_length_187_cov_2.243421_g77316_i0reverse_frame_2 - 0.049 14.1 0.2 0.056 14.0 0.2 1.1 1 0 0 1 1 1 0 Plus-3 domain Mob1_phocein PF03637.17 NODE_85252_length_187_cov_2.289474_g77311_i0forward_frame_3 - 0.017 15.1 0.3 0.02 14.9 0.3 1.1 1 0 0 1 1 1 0 Mob1/phocein family DUF4376 PF14301.6 NODE_85249_length_187_cov_2.296053_g77308_i0reverse_frame_3 - 0.097 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4376) Dioxygenase_N PF04444.14 NODE_85247_length_187_cov_2.309211_g77306_i0forward_frame_2 - 0.19 11.6 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 Catechol dioxygenase N terminus Rab_bind PF16704.5 NODE_85245_length_187_cov_2.315789_g77304_i0reverse_frame_2 - 0.14 12.2 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Rab binding domain 4HB PF17947.1 NODE_85240_length_187_cov_2.394737_g77299_i0reverse_frame_3 - 0.056 13.5 0.3 0.064 13.3 0.3 1.1 1 0 0 1 1 1 0 Four helical bundle domain ABC_tran PF00005.27 NODE_85238_length_187_cov_2.506579_g77297_i0forward_frame_3 - 8.2e-09 36.1 0.0 9.5e-09 35.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SbcCD_C PF13558.6 NODE_85238_length_187_cov_2.506579_g77297_i0forward_frame_3 - 0.0045 17.2 0.3 0.036 14.3 0.3 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 NODE_85238_length_187_cov_2.506579_g77297_i0forward_frame_3 - 0.013 15.3 0.0 0.014 15.2 0.0 1.0 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system ACR_tran PF00873.19 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 9.8e-22 76.5 1.1 1e-21 76.4 1.1 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 0.0035 16.3 0.7 0.0035 16.3 0.7 1.0 1 0 0 1 1 1 1 MMPL family DUF4013 PF13197.6 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 0.014 15.2 1.0 0.015 15.2 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) PAP2_3 PF14378.6 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 0.038 13.7 0.4 0.038 13.7 0.4 1.0 1 0 0 1 1 1 0 PAP2 superfamily Sarcoglycan_2 PF05510.13 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 0.08 11.7 0.1 0.087 11.6 0.1 1.0 1 0 0 1 1 1 0 Sarcoglycan alpha/epsilon # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks404.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks404.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks404.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks404.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- tRNA-synt_1 PF00133.22 NODE_85223_length_187_cov_2.763158_g77282_i0reverse_frame_2 - 8.3e-18 64.0 0.2 8.6e-18 63.9 0.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) NIF PF03031.18 NODE_85220_length_187_cov_2.861842_g77279_i0reverse_frame_2 - 3.9e-07 30.0 0.0 4.3e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase zf-C3HC4 PF00097.25 NODE_85220_length_187_cov_2.861842_g77279_i0forward_frame_3 - 0.052 13.4 4.0 0.053 13.4 0.3 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_85220_length_187_cov_2.861842_g77279_i0forward_frame_3 - 0.063 13.1 0.8 0.063 13.1 0.8 1.9 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) COX7C PF02935.16 NODE_85215_length_187_cov_3.072368_g77274_i0forward_frame_3 - 0.086 13.1 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc He_PIG PF05345.12 NODE_85212_length_187_cov_3.171053_g77271_i0reverse_frame_3 - 0.00093 19.3 1.2 0.004 17.3 0.9 2.2 2 1 0 2 2 2 1 Putative Ig domain CBP4 PF07960.11 NODE_85211_length_187_cov_3.236842_g77270_i0forward_frame_2 - 0.052 13.4 0.2 0.054 13.3 0.2 1.1 1 0 0 1 1 1 0 CBP4 MSP1_C PF07462.11 NODE_85210_length_187_cov_3.414474_g77269_i0reverse_frame_2 - 0.0039 16.0 1.3 0.0039 16.0 1.3 1.0 1 0 0 1 1 1 1 Merozoite surface protein 1 (MSP1) C-terminus Med2 PF11214.8 NODE_85210_length_187_cov_3.414474_g77269_i0reverse_frame_2 - 0.039 14.1 0.6 0.049 13.8 0.6 1.3 1 1 0 1 1 1 0 Mediator complex subunit 2 Exo_endo_phos_2 PF14529.6 NODE_85208_length_187_cov_3.532895_g77267_i0forward_frame_2 - 0.0038 17.1 0.0 0.0044 16.9 0.0 1.1 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase Exo_endo_phos PF03372.23 NODE_85208_length_187_cov_3.532895_g77267_i0forward_frame_2 - 0.0087 15.6 0.0 0.0087 15.6 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family IBN_N PF03810.19 NODE_85204_length_187_cov_3.875000_g77263_i0forward_frame_3 - 3.8e-06 26.7 0.0 5e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Importin-beta N-terminal domain HNF-1B_C PF04812.13 NODE_85203_length_187_cov_4.072368_g77262_i0forward_frame_2 - 0.11 12.3 0.3 0.11 12.3 0.3 1.0 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus Ac81 PF05820.11 NODE_85199_length_187_cov_6.703947_g77258_i0forward_frame_3 - 8.6 5.9 10.1 5.6 6.5 9.1 1.2 1 1 0 1 1 1 0 Baculoviridae AC81 DUF1610 PF07754.11 NODE_85197_length_187_cov_7.967105_g77256_i0reverse_frame_2 - 0.058 13.4 2.0 8.1 6.5 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) PSD2 PF07624.11 NODE_85193_length_187_cov_13.703947_g77252_i0forward_frame_3 - 0.17 11.7 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1585) DUF3942 PF13078.6 NODE_85189_length_187_cov_22.572368_g77248_i0forward_frame_3 - 0.11 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3942) EF-hand_6 PF13405.6 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 8e-06 25.4 0.1 1.3e-05 24.8 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 7.3e-05 22.0 0.6 0.00019 20.8 0.1 1.8 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 0.0013 18.1 0.5 0.0028 17.1 0.1 1.8 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 0.002 18.5 0.1 0.0022 18.4 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_9 PF14658.6 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 0.029 14.7 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain DUF2610 PF11020.8 NODE_85183_length_187_cov_26.046053_g77242_i0forward_frame_2 - 0.13 12.2 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) Nucleoside_tran PF01733.18 NODE_85179_length_187_cov_27.697368_g77238_i0reverse_frame_3 - 0.043 13.2 0.2 0.045 13.1 0.2 1.0 1 0 0 1 1 1 0 Nucleoside transporter DUF4658 PF15555.6 NODE_85179_length_187_cov_27.697368_g77238_i0reverse_frame_2 - 0.083 13.0 1.2 0.09 12.9 1.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) RAP PF08373.10 NODE_85177_length_187_cov_29.190789_g77236_i0reverse_frame_3 - 9.7e-07 28.8 0.0 1.2e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 RAP domain Phtf-FEM1B_bdg PF12129.8 NODE_85171_length_187_cov_32.736842_g77230_i0forward_frame_3 - 0.13 12.1 1.1 0.14 12.0 1.1 1.0 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor ETRAMP PF09716.10 NODE_85170_length_187_cov_33.855263_g77229_i0forward_frame_2 - 0.88 9.7 2.6 1.1 9.3 2.6 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Pec_lyase_N PF04431.13 NODE_85169_length_187_cov_34.039474_g77228_i0forward_frame_3 - 0.13 12.5 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Pectate lyase, N terminus DUF2457 PF10446.9 NODE_85167_length_187_cov_35.605263_g77226_i0reverse_frame_2 - 0.88 8.6 2.4 1 8.4 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF1441 PF07278.11 NODE_85165_length_187_cov_36.032895_g77224_i0reverse_frame_3 - 0.038 13.9 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1441) PaO PF08417.12 NODE_85161_length_187_cov_39.605263_g77220_i0forward_frame_2 - 0.052 13.7 0.0 0.059 13.5 0.0 1.2 1 0 0 1 1 1 0 Pheophorbide a oxygenase SR-25 PF10500.9 NODE_85157_length_187_cov_43.092105_g77216_i0reverse_frame_3 - 0.24 11.0 15.6 0.25 10.9 15.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein BING4CT PF08149.11 NODE_85157_length_187_cov_43.092105_g77216_i0reverse_frame_2 - 0.49 10.2 2.8 0.62 9.9 2.8 1.2 1 0 0 1 1 1 0 BING4CT (NUC141) domain HTH_36 PF13730.6 NODE_85156_length_187_cov_43.697368_g77215_i0forward_frame_3 - 3.4 7.7 4.8 10 6.2 4.8 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain Peptidase_C6 PF00851.18 NODE_85153_length_187_cov_45.585526_g77212_i0forward_frame_2 - 0.04 12.8 0.5 0.04 12.8 0.5 1.0 1 0 0 1 1 1 0 Helper component proteinase ZapB PF06005.12 NODE_85151_length_187_cov_45.763158_g77210_i0reverse_frame_3 - 0.0031 17.9 6.8 0.0038 17.6 6.8 1.1 1 0 0 1 1 1 1 Cell division protein ZapB DUF1764 PF08576.10 NODE_85149_length_187_cov_46.710526_g77208_i0reverse_frame_3 - 0.62 11.0 13.0 0.7 10.8 13.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF1764) baeRF_family2 PF18844.1 NODE_85147_length_187_cov_49.078947_g77206_i0forward_frame_3 - 0.037 14.1 0.0 0.042 13.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 Fijivirus_P9-2 PF06837.11 NODE_85145_length_187_cov_52.651316_g77204_i0forward_frame_2 - 6.6 6.1 7.3 7 6.0 7.3 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein Leu_leader PF08054.11 NODE_85143_length_187_cov_53.414474_g77202_i0reverse_frame_3 - 0.092 12.3 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 Leucine operon leader peptide Bromodomain PF00439.25 NODE_85140_length_187_cov_56.532895_g77199_i0reverse_frame_2 - 0.03 14.4 0.2 0.034 14.2 0.2 1.1 1 0 0 1 1 1 0 Bromodomain Phage_ASH PF10554.9 NODE_85139_length_187_cov_59.802632_g77198_i0reverse_frame_3 - 0.058 13.7 0.0 0.064 13.6 0.0 1.1 1 0 0 1 1 1 0 Ash protein family DUF1082 PF06449.11 NODE_85136_length_187_cov_63.223684_g77195_i0reverse_frame_3 - 0.12 12.2 0.2 0.16 11.8 0.2 1.3 1 1 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) RPS31 PF17067.5 NODE_85133_length_187_cov_67.921053_g77192_i0reverse_frame_2 - 0.028 14.6 0.2 0.032 14.4 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e ALMS_repeat PF18727.1 NODE_85131_length_187_cov_70.657895_g77190_i0reverse_frame_2 - 1.1 9.2 5.3 0.75 9.7 0.4 2.4 2 1 1 3 3 3 0 Alstrom syndrome repeat Colipase PF01114.18 NODE_85131_length_187_cov_70.657895_g77190_i0forward_frame_2 - 0.051 13.2 0.5 0.1 12.3 0.5 1.6 1 1 0 1 1 1 0 Colipase, N-terminal domain FYVE_2 PF02318.16 NODE_85129_length_187_cov_74.157895_g77188_i0forward_frame_2 - 0.084 13.1 0.6 0.099 12.9 0.6 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger ATP-synt_ab_N PF02874.23 NODE_85128_length_187_cov_78.203947_g77187_i0reverse_frame_3 - 0.069 13.7 0.0 0.081 13.5 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, beta-barrel domain LtuA PF17446.2 NODE_85118_length_187_cov_132.394737_g77177_i0reverse_frame_3 - 0.033 14.6 0.0 0.045 14.1 0.0 1.2 1 0 0 1 1 1 0 Late transcription unit A Cyclin_C_2 PF16899.5 NODE_85116_length_187_cov_158.052632_g77175_i0reverse_frame_2 - 0.026 14.9 0.0 0.029 14.8 0.0 1.1 1 0 0 1 1 1 0 Cyclin C-terminal domain PPR_2 PF13041.6 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 8.2e-11 41.9 0.1 1.2e-05 25.4 0.0 1.8 1 1 1 2 2 2 2 PPR repeat family PPR PF01535.20 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 1.3e-06 28.3 0.0 5.3e-05 23.2 0.0 2.1 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 1.2e-05 24.9 0.3 9.3e-05 22.1 0.1 2.1 2 1 0 2 2 2 1 PPR repeat PPR_3 PF13812.6 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 0.00063 19.8 0.0 0.00075 19.5 0.0 1.1 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_long PF17177.4 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 0.032 13.6 0.0 0.032 13.6 0.0 1.0 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP PAPS_reduct PF01507.19 NODE_85114_length_187_cov_163.434211_g77173_i0reverse_frame_3 - 0.076 13.1 0.4 0.077 13.0 0.4 1.0 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family PCSK9_C1 PF18459.1 NODE_85114_length_187_cov_163.434211_g77173_i0reverse_frame_2 - 0.0026 17.9 0.2 0.003 17.7 0.2 1.2 1 0 0 1 1 1 1 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain UPF0121 PF03661.13 NODE_85112_length_187_cov_168.717105_g77171_i0forward_frame_2 - 0.071 12.5 5.6 0.075 12.4 5.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) LacY_symp PF01306.19 NODE_85103_length_187_cov_4463.368421_g77162_i0reverse_frame_2 - 0.56 8.9 2.2 0.59 8.8 2.2 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter S_4TM PF18159.1 NODE_85103_length_187_cov_4463.368421_g77162_i0forward_frame_2 - 0.021 14.1 0.1 0.021 14.1 0.1 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Kelch_5 PF13854.6 NODE_85100_length_188_cov_0.784314_g77159_i0forward_frame_2 - 0.16 12.0 0.1 0.56 10.3 0.1 1.8 2 0 0 2 2 2 0 Kelch motif zf-CCHC_6 PF15288.6 NODE_85099_length_188_cov_0.816993_g77158_i0forward_frame_2 - 0.18 11.7 0.2 0.26 11.2 0.2 1.2 1 0 0 1 1 1 0 Zinc knuckle DUF3335 PF11814.8 NODE_85091_length_188_cov_0.941176_g77150_i0forward_frame_2 - 0.056 12.9 0.1 0.16 11.4 0.0 1.6 1 1 1 2 2 2 0 Peptidase_C39 like family DUF22 PF01629.16 NODE_85091_length_188_cov_0.941176_g77150_i0forward_frame_2 - 0.2 11.4 0.0 0.23 11.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF22 Shisa PF13908.6 NODE_85089_length_188_cov_0.947712_g77148_i0forward_frame_3 - 1.4 9.2 5.4 1.5 9.1 5.4 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator ECSCR PF15820.5 NODE_85089_length_188_cov_0.947712_g77148_i0forward_frame_3 - 3.4 7.5 5.0 3.6 7.4 5.0 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator zf-LITAF-like PF10601.9 NODE_85087_length_188_cov_0.954248_g77146_i0reverse_frame_2 - 0.092 13.0 0.3 0.11 12.7 0.3 1.1 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Grp7_allergen PF16984.5 NODE_85085_length_188_cov_0.973856_g77144_i0reverse_frame_3 - 0.15 12.1 2.1 0.15 12.1 2.1 1.1 1 0 0 1 1 1 0 Group 7 allergen BCAS2 PF05700.11 NODE_85085_length_188_cov_0.973856_g77144_i0reverse_frame_2 - 0.25 11.0 0.6 0.31 10.7 0.6 1.1 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 2 (BCAS2) Adhes-Ig_like PF09085.10 NODE_85083_length_188_cov_1.000000_g77142_i0reverse_frame_3 - 0.01 15.9 0.1 0.012 15.7 0.1 1.0 1 0 0 1 1 1 0 Adhesion molecule, immunoglobulin-like TM_helix PF05552.12 NODE_85082_length_188_cov_1.000000_g77141_i0forward_frame_2 - 0.1 12.6 2.6 0.15 12.0 2.6 1.5 1 1 0 1 1 1 0 Conserved TM helix Tnp_22_trimer PF17489.2 NODE_85075_length_188_cov_1.013072_g77134_i0reverse_frame_3 - 0.13 12.3 0.1 0.2 11.7 0.1 1.3 1 0 0 1 1 1 0 L1 transposable element trimerization domain DUF2615 PF11027.8 NODE_85074_length_188_cov_1.013072_g77133_i0reverse_frame_2 - 0.036 14.2 0.2 0.041 14.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) DUF2650 PF10853.8 NODE_85074_length_188_cov_1.013072_g77133_i0forward_frame_2 - 0.13 12.0 3.8 0.22 11.2 3.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) DUF1556 PF07590.11 NODE_85073_length_188_cov_1.019608_g77132_i0reverse_frame_3 - 0.16 12.3 1.1 0.18 12.1 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1556) Kelch_5 PF13854.6 NODE_85069_length_188_cov_1.032680_g77128_i0forward_frame_2 - 0.00045 20.1 0.3 0.00045 20.1 0.3 1.5 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 NODE_85069_length_188_cov_1.032680_g77128_i0forward_frame_2 - 0.0043 17.0 0.1 0.0043 17.0 0.1 1.4 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_85069_length_188_cov_1.032680_g77128_i0forward_frame_2 - 0.013 15.8 0.0 0.017 15.4 0.0 1.1 1 0 0 1 1 1 0 Galactose oxidase, central domain Moricin PF06451.11 NODE_85058_length_188_cov_1.039216_g77117_i0forward_frame_3 - 0.053 13.3 0.2 0.075 12.8 0.2 1.3 1 0 0 1 1 1 0 Moricin DUF3756 PF12581.8 NODE_85057_length_188_cov_1.039216_g77116_i0reverse_frame_3 - 0.0042 17.0 1.3 0.0042 17.0 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3756) PS_pyruv_trans PF04230.13 NODE_85056_length_188_cov_1.039216_g77115_i0reverse_frame_2 - 0.016 15.1 0.0 0.018 15.0 0.0 1.0 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase DUF4715 PF15835.5 NODE_85052_length_188_cov_1.039216_g77111_i0reverse_frame_2 - 0.053 13.6 0.0 0.059 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4715) Papilloma_E5 PF03025.14 NODE_85042_length_188_cov_1.045752_g77101_i0forward_frame_2 - 0.18 12.0 4.3 0.14 12.4 1.4 1.9 2 0 0 2 2 2 0 Papillomavirus E5 Lamprin PF06403.11 NODE_85034_length_188_cov_1.045752_g77093_i0reverse_frame_2 - 0.1 12.6 3.4 0.13 12.2 3.4 1.2 1 0 0 1 1 1 0 Lamprin FAP PF07174.11 NODE_85034_length_188_cov_1.045752_g77093_i0forward_frame_3 - 0.2 11.1 6.1 0.2 11.1 6.1 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Herpes_capsid PF06112.11 NODE_85029_length_188_cov_1.045752_g77088_i0reverse_frame_2 - 0.029 14.5 1.6 0.029 14.5 1.6 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DCA16 PF15349.6 NODE_85029_length_188_cov_1.045752_g77088_i0forward_frame_3 - 0.081 12.5 0.2 0.081 12.5 0.2 1.1 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 IFT57 PF10498.9 NODE_85024_length_188_cov_1.045752_g77083_i0forward_frame_2 - 0.11 11.4 1.3 0.13 11.3 1.3 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 FSA_C PF10479.9 NODE_85023_length_188_cov_1.045752_g77082_i0reverse_frame_3 - 4.5 5.3 11.2 4.4 5.3 11.2 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Consortin_C PF15281.6 NODE_85023_length_188_cov_1.045752_g77082_i0forward_frame_3 - 2.8 8.0 6.1 0.28 11.2 2.0 1.5 1 1 1 2 2 2 0 Consortin C-terminus Phage_holin_3_6 PF07332.11 NODE_85023_length_188_cov_1.045752_g77082_i0forward_frame_2 - 0.63 10.1 11.2 0.69 10.0 11.2 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF1700 PF08006.11 NODE_85023_length_188_cov_1.045752_g77082_i0forward_frame_2 - 4.7 6.7 9.6 4.2 6.9 9.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Cas_GSU0053 PF09617.10 NODE_85020_length_188_cov_1.045752_g77079_i0forward_frame_2 - 0.043 13.8 0.0 0.047 13.6 0.0 1.0 1 0 0 1 1 1 0 CRISPR-associated protein GSU0053 (Cas_GSU0053) Palm_thioest PF02089.15 NODE_85018_length_188_cov_1.045752_g77077_i0reverse_frame_3 - 4.9e-09 36.4 0.0 5.5e-09 36.2 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase FSH1 PF03959.13 NODE_85018_length_188_cov_1.045752_g77077_i0reverse_frame_3 - 0.018 14.7 0.0 0.018 14.7 0.0 1.1 1 0 0 1 1 1 0 Serine hydrolase (FSH1) DUF676 PF05057.14 NODE_85018_length_188_cov_1.045752_g77077_i0reverse_frame_3 - 0.021 14.3 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) LCAT PF02450.15 NODE_85018_length_188_cov_1.045752_g77077_i0reverse_frame_3 - 0.2 10.8 0.0 0.2 10.8 0.0 1.0 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase ABC2_membrane PF01061.24 NODE_85015_length_188_cov_1.045752_g77074_i0forward_frame_2 - 3.7e-09 36.3 6.6 3.8e-09 36.3 6.6 1.0 1 0 0 1 1 1 1 ABC-2 type transporter DUF5472 PF17566.2 NODE_85013_length_188_cov_1.045752_g77072_i0reverse_frame_3 - 0.053 13.5 0.0 0.071 13.1 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) DUF5441 PF17513.2 NODE_85004_length_188_cov_1.045752_g77063_i0forward_frame_3 - 0.013 15.3 0.1 0.014 15.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5441) Lep_receptor_Ig PF06328.11 NODE_85003_length_188_cov_1.045752_g77062_i0reverse_frame_2 - 0.0033 17.4 0.0 0.0037 17.2 0.0 1.1 1 0 0 1 1 1 1 Ig-like C2-type domain YejG PF13989.6 NODE_85000_length_188_cov_1.045752_g77059_i0forward_frame_2 - 0.22 12.0 0.7 2.4 8.6 0.3 1.9 1 1 1 2 2 2 0 YejG-like protein Lamprin PF06403.11 NODE_84999_length_188_cov_1.045752_g77058_i0forward_frame_3 - 0.073 13.0 3.1 0.091 12.7 3.1 1.2 1 0 0 1 1 1 0 Lamprin Nrap_D4 PF17405.2 NODE_84998_length_188_cov_1.045752_g77057_i0forward_frame_3 - 0.079 12.3 0.0 0.079 12.3 0.0 1.0 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 2OG-FeII_Oxy_3 PF13640.6 NODE_84995_length_188_cov_1.045752_g77054_i0forward_frame_3 - 1.4e-06 29.1 0.0 1.5e-06 29.0 0.0 1.0 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 NODE_84995_length_188_cov_1.045752_g77054_i0forward_frame_3 - 3.9e-06 27.4 0.1 3.9e-06 27.4 0.1 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF4957 PF16318.5 NODE_84991_length_188_cov_1.045752_g77050_i0reverse_frame_3 - 0.025 14.5 4.1 0.029 14.3 4.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) Peptidase_C54 PF03416.19 NODE_84991_length_188_cov_1.045752_g77050_i0forward_frame_3 - 0.028 13.8 0.2 0.03 13.7 0.2 1.0 1 0 0 1 1 1 0 Peptidase family C54 DBD_Tnp_Hermes PF10683.9 NODE_84990_length_188_cov_1.045752_g77049_i0forward_frame_3 - 0.015 15.0 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 Hermes transposase DNA-binding domain DsbC PF11412.8 NODE_84989_length_188_cov_1.045752_g77048_i0reverse_frame_2 - 0.052 13.6 0.0 0.054 13.5 0.0 1.1 1 0 0 1 1 1 0 Disulphide bond corrector protein DsbC SRP72 PF08492.12 NODE_84988_length_188_cov_1.045752_g77047_i0reverse_frame_2 - 0.063 13.7 0.0 0.089 13.2 0.0 1.2 1 0 0 1 1 1 0 SRP72 RNA-binding domain DUF1736 PF08409.11 NODE_84982_length_188_cov_1.045752_g77041_i0forward_frame_2 - 0.096 12.7 0.2 0.12 12.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1736) Defensin_beta PF00711.19 NODE_84980_length_188_cov_1.045752_g77039_i0forward_frame_2 - 0.061 13.4 1.2 0.098 12.7 1.1 1.4 1 1 0 1 1 1 0 Beta defensin FeoB_associated PF12669.7 NODE_84979_length_188_cov_1.045752_g77038_i0reverse_frame_3 - 1.5 9.3 7.8 2.3 8.7 0.2 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein DUF5409 PF17421.2 NODE_84978_length_188_cov_1.045752_g77037_i0reverse_frame_3 - 0.14 12.9 1.0 0.17 12.6 1.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Cob_adeno_trans PF01923.18 NODE_84975_length_188_cov_1.045752_g77034_i0reverse_frame_2 - 0.23 11.6 0.5 0.27 11.4 0.5 1.3 1 1 0 1 1 1 0 Cobalamin adenosyltransferase Mito_fiss_reg PF05308.11 NODE_84975_length_188_cov_1.045752_g77034_i0forward_frame_2 - 0.63 10.1 6.3 0.62 10.1 6.3 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 NODE_84975_length_188_cov_1.045752_g77034_i0forward_frame_2 - 4.3 6.7 12.1 5.5 6.4 12.1 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF3915 PF13054.6 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_3 - 0.0021 18.1 0.1 0.0021 18.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) DNA_pol_A PF00476.20 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_3 - 0.0085 15.2 0.0 0.0085 15.2 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase family A Atrophin-1 PF03154.15 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_3 - 0.73 8.0 1.5 0.77 8.0 1.5 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_2 - 0.015 15.3 0.6 0.016 15.2 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Noggin PF05806.12 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_2 - 0.15 11.9 0.2 0.16 11.8 0.2 1.0 1 0 0 1 1 1 0 Noggin DNA_ligase_C PF17879.1 NODE_84967_length_188_cov_1.084967_g77026_i0reverse_frame_3 - 0.11 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 DNA ligase C-terminal domain DUF4769 PF15992.5 NODE_84967_length_188_cov_1.084967_g77026_i0reverse_frame_2 - 0.087 12.6 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) Herpes_UL49_5 PF05702.11 NODE_84965_length_188_cov_1.098039_g77024_i0reverse_frame_2 - 0.015 15.3 0.6 0.021 14.9 0.6 1.2 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein RFC1 PF08519.12 NODE_84957_length_188_cov_1.124183_g77016_i0reverse_frame_2 - 0.041 14.1 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Replication factor RFC1 C terminal domain Fer4_15 PF13459.6 NODE_84955_length_188_cov_1.156863_g77014_i0reverse_frame_3 - 0.15 12.8 0.0 0.16 12.8 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain SecIII_SopE_N PF05364.14 NODE_84955_length_188_cov_1.156863_g77014_i0reverse_frame_2 - 0.06 13.4 0.1 0.07 13.2 0.1 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus LCE PF14672.6 NODE_84955_length_188_cov_1.156863_g77014_i0forward_frame_2 - 0.098 13.3 0.1 0.12 13.0 0.1 1.1 1 0 0 1 1 1 0 Late cornified envelope HLH PF00010.26 NODE_84945_length_188_cov_1.183007_g77004_i0reverse_frame_3 - 0.065 13.2 0.0 0.084 12.9 0.0 1.2 1 0 0 1 1 1 0 Helix-loop-helix DNA-binding domain Far-17a_AIG1 PF04750.14 NODE_84945_length_188_cov_1.183007_g77004_i0reverse_frame_3 - 0.13 11.6 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 FAR-17a/AIG1-like protein Transgly_assoc PF04226.13 NODE_84944_length_188_cov_1.183007_g77003_i0reverse_frame_2 - 0.0087 16.3 0.2 0.013 15.8 0.2 1.4 1 0 0 1 1 1 1 Transglycosylase associated protein ANAPC4_WD40 PF12894.7 NODE_84940_length_188_cov_1.196078_g76999_i0reverse_frame_3 - 0.014 15.7 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain DUF386 PF04074.12 NODE_84940_length_188_cov_1.196078_g76999_i0reverse_frame_3 - 0.07 13.0 0.0 0.07 13.0 0.0 1.0 1 0 0 1 1 1 0 YhcH/YjgK/YiaL Adenylsucc_synt PF00709.21 NODE_84938_length_188_cov_1.202614_g76997_i0forward_frame_2 - 2.1e-16 59.9 0.1 2.2e-16 59.8 0.1 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase MTA_R1 PF17226.2 NODE_84936_length_188_cov_1.209150_g76995_i0reverse_frame_3 - 0.056 13.6 2.2 0.066 13.4 2.2 1.2 1 0 0 1 1 1 0 MTA R1 domain Aida_C2 PF14186.6 NODE_84928_length_188_cov_1.222222_g76987_i0reverse_frame_2 - 0.081 12.5 0.0 0.081 12.5 0.0 1.0 1 0 0 1 1 1 0 Cytoskeletal adhesion Lamprin PF06403.11 NODE_84926_length_188_cov_1.228758_g76985_i0forward_frame_3 - 0.031 14.3 1.0 0.034 14.1 1.0 1.1 1 0 0 1 1 1 0 Lamprin Pox_A28 PF04584.14 NODE_84924_length_188_cov_1.228758_g76983_i0forward_frame_3 - 0.15 12.2 0.3 0.16 12.1 0.3 1.1 1 0 0 1 1 1 0 Poxvirus A28 family SelP_N PF04592.14 NODE_84918_length_188_cov_1.254902_g76977_i0forward_frame_2 - 2.3 7.6 12.7 2.3 7.6 12.7 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Coatomer_WDAD PF04053.14 NODE_84916_length_188_cov_1.267974_g76975_i0forward_frame_2 - 2.6e-08 33.3 1.3 3.1e-08 33.1 1.3 1.0 1 0 0 1 1 1 1 Coatomer WD associated region Enterotoxin_a PF01375.17 NODE_84913_length_188_cov_1.281046_g76972_i0forward_frame_3 - 0.17 11.5 0.1 0.17 11.5 0.1 1.0 1 0 0 1 1 1 0 Heat-labile enterotoxin alpha chain TcdB_toxin_midC PF12255.8 NODE_84911_length_188_cov_1.294118_g76970_i0reverse_frame_2 - 0.011 15.8 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 0 Insecticide toxin TcdB middle/C-terminal region DUF4070 PF13282.6 NODE_84905_length_188_cov_1.300654_g76964_i0reverse_frame_3 - 0.12 12.5 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) Toxin_24 PF08094.11 NODE_84903_length_188_cov_1.300654_g76962_i0forward_frame_2 - 0.08 12.8 0.5 0.08 12.8 0.5 2.0 2 0 0 2 2 2 0 Conotoxin TVIIA/GS family Serglycin PF04360.12 NODE_84902_length_188_cov_1.307190_g76961_i0reverse_frame_2 - 0.013 15.4 4.2 0.014 15.4 4.2 1.2 1 0 0 1 1 1 0 Serglycin Fungus-induced PF10917.8 NODE_84902_length_188_cov_1.307190_g76961_i0reverse_frame_2 - 7.3 7.0 11.4 77 3.7 11.4 2.1 1 1 0 1 1 1 0 Fungus-induced protein SSP160 PF06933.11 NODE_84902_length_188_cov_1.307190_g76961_i0forward_frame_2 - 8.6 4.4 10.0 7.6 4.6 10.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 TTL PF03133.15 NODE_84896_length_188_cov_1.307190_g76955_i0forward_frame_2 - 6.9e-16 58.2 0.3 7.4e-16 58.1 0.3 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family GTP_EFTU PF00009.27 NODE_84887_length_188_cov_1.326797_g76946_i0forward_frame_3 - 4.2e-15 55.8 0.1 4.5e-15 55.7 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Astro_capsid_p PF12226.8 NODE_84886_length_188_cov_1.326797_g76945_i0forward_frame_3 - 0.0069 15.6 4.0 0.0071 15.5 4.0 1.0 1 0 0 1 1 1 1 Turkey astrovirus capsid protein E1_UFD PF09358.10 NODE_84886_length_188_cov_1.326797_g76945_i0forward_frame_3 - 0.16 12.7 1.6 0.18 12.6 1.6 1.0 1 0 0 1 1 1 0 Ubiquitin fold domain RSN1_TM PF13967.6 NODE_84883_length_188_cov_1.359477_g76942_i0reverse_frame_3 - 0.012 15.3 0.2 0.013 15.3 0.2 1.1 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport Pox_EPC_I2-L1 PF12575.8 NODE_84883_length_188_cov_1.359477_g76942_i0reverse_frame_3 - 0.027 14.7 0.2 0.032 14.4 0.2 1.0 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 LisH_TPL PF17814.1 NODE_84878_length_188_cov_1.385621_g76937_i0reverse_frame_3 - 0.19 11.4 0.8 0.36 10.5 0.8 1.4 1 0 0 1 1 1 0 LisH-like dimerisation domain DUF4999 PF16390.5 NODE_84876_length_188_cov_1.398693_g76935_i0reverse_frame_2 - 0.0086 16.3 0.3 0.011 15.9 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function MltA PF03562.17 NODE_84871_length_188_cov_1.405229_g76930_i0reverse_frame_2 - 4.3e-17 62.6 0.6 4.5e-17 62.6 0.6 1.0 1 0 0 1 1 1 1 MltA specific insert domain TPR_2 PF07719.17 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 5e-05 23.1 1.7 0.01 15.9 0.5 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.00074 19.4 1.5 0.012 15.5 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.0035 17.1 0.2 0.024 14.4 0.1 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.0036 17.6 2.2 0.0066 16.7 2.2 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.037 13.7 0.5 0.06 13.0 0.2 1.5 2 0 0 2 2 2 0 TPR repeat TPR_14 PF13428.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.054 14.3 3.8 0.21 12.5 0.5 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.11 13.1 6.0 0.23 12.1 6.0 1.5 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 1.3 9.9 5.8 1.1 10.1 0.3 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat Bcl-2 PF00452.19 NODE_84869_length_188_cov_1.418301_g76928_i0reverse_frame_3 - 0.046 14.4 0.0 0.048 14.3 0.0 1.1 1 0 0 1 1 1 0 Apoptosis regulator proteins, Bcl-2 family ThrE_2 PF12821.7 NODE_84863_length_188_cov_1.464052_g76922_i0forward_frame_2 - 0.017 15.2 1.0 0.02 15.0 1.0 1.0 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE cNMP_binding PF00027.29 NODE_84862_length_188_cov_1.483660_g76921_i0forward_frame_2 - 0.14 12.2 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain MPM1 PF17234.2 NODE_84857_length_188_cov_1.509804_g76916_i0reverse_frame_3 - 0.036 14.3 5.1 0.045 14.0 5.1 1.2 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 DUF1016_N PF17761.1 NODE_84855_length_188_cov_1.516340_g76914_i0forward_frame_3 - 0.17 12.0 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 DUF1016 N-terminal domain cEGF PF12662.7 NODE_84840_length_188_cov_1.549020_g76899_i0reverse_frame_3 - 0.0051 16.7 2.7 0.0092 15.9 2.7 1.4 1 0 0 1 1 1 1 Complement Clr-like EGF-like FXa_inhibition PF14670.6 NODE_84840_length_188_cov_1.549020_g76899_i0reverse_frame_3 - 0.047 14.0 7.5 0.068 13.5 7.5 1.2 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site Inhibitor_Mig-6 PF11555.8 NODE_84836_length_188_cov_1.549020_g76895_i0reverse_frame_2 - 0.016 15.3 2.6 0.021 14.9 2.6 1.1 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 DUF594 PF04578.13 NODE_84833_length_188_cov_1.555556_g76892_i0reverse_frame_3 - 0.033 13.8 0.0 0.044 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF594 Herpes_US9 PF06072.11 NODE_84832_length_188_cov_1.555556_g76891_i0forward_frame_2 - 0.0025 17.7 0.2 0.0035 17.2 0.2 1.2 1 0 0 1 1 1 1 Alphaherpesvirus tegument protein US9 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks405.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks405.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks405.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks405.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:31:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Luteo_PO PF04662.13 NODE_84831_length_188_cov_1.562092_g76890_i0forward_frame_2 - 0.079 12.6 0.0 0.087 12.5 0.0 1.0 1 0 0 1 1 1 0 Luteovirus P0 protein HECW_N PF16562.5 NODE_84829_length_188_cov_1.562092_g76888_i0reverse_frame_3 - 0.065 13.0 0.1 0.065 13.0 0.1 1.1 1 0 0 1 1 1 0 N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2 zf-CCCH PF00642.24 NODE_84829_length_188_cov_1.562092_g76888_i0reverse_frame_3 - 1.2 9.1 7.5 17 5.4 0.2 3.0 3 0 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Ada_Zn_binding PF02805.16 NODE_84825_length_188_cov_1.562092_g76884_i0forward_frame_3 - 0.014 15.4 0.5 0.014 15.4 0.5 1.5 2 0 0 2 2 2 0 Metal binding domain of Ada Imp-YgjV PF10688.9 NODE_84821_length_188_cov_1.568627_g76880_i0reverse_frame_2 - 0.16 11.8 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial inner membrane protein Lem_TRP PF08262.11 NODE_84817_length_188_cov_1.568627_g76876_i0forward_frame_2 - 0.48 10.5 0.8 0.48 10.5 0.8 2.7 3 0 0 3 3 3 0 Leucophaea maderae tachykinin-related peptide DUF1999 PF09390.10 NODE_84816_length_188_cov_1.568627_g76875_i0reverse_frame_2 - 0.17 11.5 0.1 0.19 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) AA_permease_N PF08403.10 NODE_84808_length_188_cov_1.568627_g76867_i0reverse_frame_3 - 0.014 14.9 0.2 0.017 14.6 0.2 1.1 1 0 0 1 1 1 0 Amino acid permease N-terminal Bap31 PF05529.12 NODE_84807_length_188_cov_1.568627_g76866_i0reverse_frame_3 - 0.19 11.6 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region Rab_bind PF16704.5 NODE_84806_length_188_cov_1.568627_g76865_i0forward_frame_2 - 0.049 13.7 0.2 6.1 7.0 0.0 2.1 1 1 1 2 2 2 0 Rab binding domain Pox_polyA_pol PF03296.13 NODE_84800_length_188_cov_1.601307_g76859_i0reverse_frame_3 - 0.0018 18.2 0.1 0.002 18.0 0.1 1.1 1 0 0 1 1 1 1 Poxvirus poly(A) polymerase nucleotidyltransferase domain NS3_envE PF02723.14 NODE_84799_length_188_cov_1.607843_g76858_i0forward_frame_3 - 0.018 15.1 0.2 0.024 14.7 0.2 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E ADIP PF11559.8 NODE_84797_length_188_cov_1.640523_g76856_i0reverse_frame_2 - 0.0029 17.7 2.3 0.0029 17.7 2.3 1.0 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding TMF_DNA_bd PF12329.8 NODE_84797_length_188_cov_1.640523_g76856_i0reverse_frame_2 - 0.11 12.5 2.3 2 8.5 0.1 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Tropomyosin_1 PF12718.7 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.00039 20.6 5.0 0.00039 20.6 5.0 1.0 1 0 0 1 1 1 1 Tropomyosin like XhlA PF10779.9 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.0046 17.1 3.9 0.0046 17.1 3.9 1.4 1 1 1 2 2 2 1 Haemolysin XhlA Lebercilin PF15619.6 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.011 15.4 5.5 0.012 15.3 5.5 1.0 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease KIX PF02172.16 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.028 14.7 0.2 0.033 14.5 0.2 1.1 1 0 0 1 1 1 0 KIX domain TMF_DNA_bd PF12329.8 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.03 14.3 6.5 0.041 13.9 6.5 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Histone_HNS PF00816.21 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.11 13.4 2.8 0.13 13.1 2.8 1.2 1 0 0 1 1 1 0 H-NS histone family SlyX PF04102.12 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.12 13.0 1.8 0.18 12.4 1.8 1.4 1 1 0 1 1 1 0 SlyX MtrG PF04210.13 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.31 10.9 0.7 1 9.3 0.1 1.9 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G PD40 PF07676.12 NODE_84794_length_188_cov_1.660131_g76853_i0reverse_frame_2 - 0.086 12.8 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 WD40-like Beta Propeller Repeat RVT_1 PF00078.27 NODE_84792_length_188_cov_1.673203_g76851_i0reverse_frame_2 - 3.2e-06 26.8 0.0 3.3e-06 26.8 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF1196 PF06709.11 NODE_84788_length_188_cov_1.686275_g76847_i0forward_frame_3 - 0.16 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1196) DUF3915 PF13054.6 NODE_84784_length_188_cov_1.718954_g76843_i0forward_frame_2 - 0.13 12.3 1.4 0.14 12.2 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) HgmA PF04209.13 NODE_84781_length_188_cov_1.751634_g76840_i0forward_frame_3 - 0.067 11.9 0.0 0.077 11.7 0.0 1.0 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase RIF5_SNase_1 PF18187.1 NODE_84780_length_188_cov_1.751634_g76839_i0reverse_frame_3 - 0.062 13.0 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 TbRIF5 SNase domain 1 Holin_SPP1 PF04688.13 NODE_84780_length_188_cov_1.751634_g76839_i0forward_frame_2 - 0.13 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 SPP1 phage holin Glyco_hydro_31 PF01055.26 NODE_84777_length_188_cov_1.758170_g76836_i0reverse_frame_2 - 1.3e-07 31.2 0.1 1.3e-07 31.2 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 7TM_GPCR_Srh PF10318.9 NODE_84774_length_188_cov_1.777778_g76833_i0reverse_frame_3 - 0.013 14.5 1.8 0.015 14.3 1.8 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh Peptidase_C1 PF00112.23 NODE_84772_length_188_cov_1.784314_g76831_i0reverse_frame_2 - 0.0011 19.0 0.0 0.0012 18.9 0.0 1.0 1 0 0 1 1 1 1 Papain family cysteine protease DUF2434 PF10361.9 NODE_84770_length_188_cov_1.790850_g76829_i0forward_frame_3 - 0.053 12.5 2.9 0.058 12.4 2.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2434) MgrB PF13998.6 NODE_84769_length_188_cov_1.790850_g76828_i0forward_frame_2 - 0.089 12.7 0.3 0.2 11.6 0.1 1.7 2 0 0 2 2 2 0 MgrB protein DUF4761 PF15958.5 NODE_84768_length_188_cov_1.797386_g76827_i0reverse_frame_3 - 0.072 13.2 0.0 0.074 13.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4761) MCM_OB PF17207.3 NODE_84764_length_188_cov_1.816993_g76823_i0reverse_frame_3 - 9.2e-14 51.4 2.0 9.3e-14 51.4 2.0 1.0 1 0 0 1 1 1 1 MCM OB domain DUF2039 PF10217.9 NODE_84764_length_188_cov_1.816993_g76823_i0reverse_frame_3 - 0.015 15.6 2.0 0.016 15.5 2.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) BRD4_CDT PF17105.5 NODE_84763_length_188_cov_1.816993_g76822_i0forward_frame_3 - 0.032 13.8 3.3 0.048 13.3 0.8 2.2 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 WD40 PF00400.32 NODE_84761_length_188_cov_1.823529_g76820_i0reverse_frame_3 - 1.3e-07 32.2 1.4 2.7e-07 31.2 0.2 1.9 2 0 0 2 2 2 1 WD domain, G-beta repeat PNPase_C PF12111.8 NODE_84759_length_188_cov_1.823529_g76818_i0forward_frame_3 - 0.035 13.5 0.0 0.051 13.0 0.0 1.3 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal Mid2 PF04478.12 NODE_84758_length_188_cov_1.823529_g76817_i0reverse_frame_2 - 0.00069 19.5 0.5 0.0008 19.3 0.5 1.1 1 0 0 1 1 1 1 Mid2 like cell wall stress sensor UPF1_Zn_bind PF09416.10 NODE_84754_length_188_cov_1.830065_g76813_i0reverse_frame_3 - 0.043 13.8 0.2 0.063 13.2 0.2 1.3 1 1 0 1 1 1 0 RNA helicase (UPF2 interacting domain) PcrB PF01884.17 NODE_84754_length_188_cov_1.830065_g76813_i0reverse_frame_3 - 0.063 12.7 0.0 0.067 12.6 0.0 1.0 1 0 0 1 1 1 0 PcrB family DNA_ligase_ZBD PF03119.16 NODE_84752_length_188_cov_1.843137_g76811_i0forward_frame_2 - 0.12 12.4 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain YopE PF03545.13 NODE_84751_length_188_cov_1.843137_g76810_i0forward_frame_2 - 0.15 12.3 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Yersinia virulence determinant (YopE) 7TM_GPCR_Srh PF10318.9 NODE_84743_length_188_cov_1.960784_g76802_i0reverse_frame_3 - 0.067 12.2 0.1 0.078 12.0 0.1 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh CNOT11 PF10155.9 NODE_84740_length_188_cov_1.973856_g76799_i0forward_frame_3 - 0.083 13.1 0.1 0.087 13.0 0.1 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 Fer4_3 PF12798.7 NODE_84733_length_188_cov_2.032680_g76792_i0reverse_frame_2 - 4 8.6 9.5 3.9 8.6 7.0 2.2 2 1 0 2 2 2 0 4Fe-4S binding domain Glyco_trans_2_3 PF13632.6 NODE_84730_length_188_cov_2.058824_g76789_i0reverse_frame_3 - 0.00085 19.3 1.7 0.00095 19.1 1.7 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 DUF4623 PF15416.6 NODE_84727_length_188_cov_2.078431_g76786_i0forward_frame_3 - 0.0064 15.1 0.8 0.0067 15.1 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4623) DUF953 PF06110.11 NODE_84723_length_188_cov_2.091503_g76782_i0reverse_frame_2 - 0.016 14.8 0.1 0.018 14.7 0.1 1.0 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) DPBB_1 PF03330.18 NODE_84717_length_188_cov_2.183007_g76776_i0reverse_frame_3 - 0.12 12.7 0.5 0.14 12.5 0.5 1.1 1 0 0 1 1 1 0 Lytic transglycolase Defensin_4 PF07936.12 NODE_84717_length_188_cov_2.183007_g76776_i0forward_frame_3 - 0.0058 16.5 1.5 0.028 14.3 1.4 1.9 1 1 1 2 2 2 1 Potassium-channel blocking toxin PPR_2 PF13041.6 NODE_84716_length_188_cov_2.183007_g76775_i0forward_frame_3 - 0.0031 17.7 0.0 0.016 15.4 0.0 1.9 2 0 0 2 2 2 1 PPR repeat family PPR_long PF17177.4 NODE_84716_length_188_cov_2.183007_g76775_i0forward_frame_3 - 0.043 13.2 0.0 0.045 13.1 0.0 1.0 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 NODE_84716_length_188_cov_2.183007_g76775_i0forward_frame_3 - 0.047 13.8 0.1 0.055 13.6 0.1 1.2 1 0 0 1 1 1 0 Pentatricopeptide repeat domain UDPGP PF01704.18 NODE_84716_length_188_cov_2.183007_g76775_i0forward_frame_2 - 0.032 12.9 0.0 0.035 12.7 0.0 1.0 1 0 0 1 1 1 0 UTP--glucose-1-phosphate uridylyltransferase Nif11 PF07862.11 NODE_84714_length_188_cov_2.196078_g76773_i0reverse_frame_3 - 0.12 12.7 0.2 0.69 10.3 0.0 2.0 2 0 0 2 2 2 0 Nif11 domain Lactamase_B_4 PF13691.6 NODE_84702_length_188_cov_2.366013_g76761_i0forward_frame_2 - 0.026 14.2 0.0 0.05 13.3 0.0 1.5 1 1 1 2 2 2 0 tRNase Z endonuclease Atg14 PF10186.9 NODE_84698_length_188_cov_2.444444_g76757_i0forward_frame_2 - 0.055 12.5 0.3 0.056 12.5 0.3 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DHFR_1 PF00186.19 NODE_84697_length_188_cov_2.450980_g76756_i0forward_frame_2 - 5.9e-07 29.3 0.0 6e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Dihydrofolate reductase HTH_AsnC-type PF13404.6 NODE_84696_length_188_cov_2.464052_g76755_i0reverse_frame_3 - 0.084 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain RNHCP PF12647.7 NODE_84696_length_188_cov_2.464052_g76755_i0forward_frame_2 - 0.1 12.6 0.0 0.11 12.5 0.0 1.2 1 1 0 1 1 1 0 RNHCP domain Glyco_trans_2_3 PF13632.6 NODE_84695_length_188_cov_2.477124_g76754_i0reverse_frame_3 - 0.00057 19.8 1.5 0.00064 19.7 1.5 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Ser_hydrolase PF06821.13 NODE_84685_length_188_cov_2.607843_g76744_i0reverse_frame_3 - 0.1 12.5 0.0 0.11 12.4 0.0 1.0 1 0 0 1 1 1 0 Serine hydrolase PAH PF02671.21 NODE_84685_length_188_cov_2.607843_g76744_i0forward_frame_3 - 0.049 13.8 0.1 0.061 13.5 0.1 1.3 1 0 0 1 1 1 0 Paired amphipathic helix repeat Tudor_1_RapA PF18339.1 NODE_84683_length_188_cov_2.614379_g76742_i0reverse_frame_2 - 0.053 13.5 0.0 0.072 13.0 0.0 1.2 1 0 0 1 1 1 0 RapA N-terminal Tudor like domain 1 H-kinase_dim PF02895.14 NODE_84682_length_188_cov_2.620915_g76741_i0forward_frame_2 - 2.9e-13 50.0 0.2 4.4e-13 49.4 0.2 1.2 1 0 0 1 1 1 1 Signal transducing histidine kinase, homodimeric domain vMSA PF00695.19 NODE_84680_length_188_cov_2.679739_g76739_i0reverse_frame_3 - 5.4 6.0 8.7 5.7 5.9 8.7 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Ferlin_C PF16165.5 NODE_84680_length_188_cov_2.679739_g76739_i0reverse_frame_3 - 6 6.8 7.2 6.5 6.7 7.2 1.0 1 0 0 1 1 1 0 Ferlin C-terminus GluR_Homer-bdg PF10606.9 NODE_84679_length_188_cov_2.725490_g76738_i0forward_frame_2 - 0.043 14.0 1.6 0.043 14.0 1.6 1.6 2 0 0 2 2 2 0 Homer-binding domain of metabotropic glutamate receptor RCC1 PF00415.18 NODE_84677_length_188_cov_2.771242_g76736_i0reverse_frame_2 - 4.9e-09 36.7 0.0 7.3e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Keratin PF02422.16 NODE_84675_length_188_cov_2.882353_g76734_i0reverse_frame_2 - 0.0095 15.6 0.3 0.012 15.3 0.3 1.2 1 0 0 1 1 1 1 Keratin TT_ORF2 PF02957.15 NODE_84670_length_188_cov_2.986928_g76729_i0forward_frame_2 - 0.33 11.9 2.5 0.32 11.9 2.5 1.1 1 0 0 1 1 1 0 TT viral ORF2 CRT-like PF08627.10 NODE_84667_length_188_cov_3.071895_g76726_i0reverse_frame_2 - 0.0056 15.7 0.1 0.0057 15.6 0.1 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like RINGv PF12906.7 NODE_84665_length_188_cov_3.111111_g76724_i0forward_frame_3 - 3.3e-09 36.7 0.1 4.3e-09 36.3 0.1 1.1 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 NODE_84665_length_188_cov_3.111111_g76724_i0forward_frame_3 - 0.066 13.4 0.0 0.07 13.3 0.0 1.2 1 0 0 1 1 1 0 FANCL C-terminal domain Dam PF05869.11 NODE_84664_length_188_cov_3.111111_g76723_i0reverse_frame_3 - 0.14 11.7 0.0 0.15 11.6 0.0 1.0 1 0 0 1 1 1 0 DNA N-6-adenine-methyltransferase (Dam) Fer4_4 PF12800.7 NODE_84661_length_188_cov_3.163399_g76720_i0forward_frame_2 - 0.53 10.9 4.6 0.92 10.2 4.6 1.6 1 1 0 1 1 1 0 4Fe-4S binding domain Nucleos_tra2_C PF07662.13 NODE_84658_length_188_cov_3.196078_g76717_i0reverse_frame_3 - 0.018 14.9 0.0 0.022 14.6 0.0 1.1 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus Nucleos_tra2_C PF07662.13 NODE_84658_length_188_cov_3.196078_g76717_i0reverse_frame_2 - 0.009 15.9 0.1 0.011 15.6 0.1 1.1 1 0 0 1 1 1 1 Na+ dependent nucleoside transporter C-terminus MRP_L53 PF10780.9 NODE_84652_length_188_cov_3.784314_g76711_i0reverse_frame_3 - 0.052 13.7 0.0 0.075 13.2 0.0 1.3 1 0 0 1 1 1 0 39S ribosomal protein L53/MRP-L53 YecM PF06185.12 NODE_84651_length_188_cov_3.928105_g76710_i0reverse_frame_2 - 3.1e-23 82.4 0.0 3.2e-23 82.3 0.0 1.0 1 0 0 1 1 1 1 YecM protein Phage_glycop_gL PF11108.8 NODE_84650_length_188_cov_4.222222_g76709_i0forward_frame_2 - 0.1 12.6 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Viral glycoprotein L YMF19 PF02326.15 NODE_84648_length_188_cov_5.392157_g76707_i0forward_frame_3 - 0.031 15.1 1.0 0.039 14.7 1.0 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 AT_hook PF02178.19 NODE_84648_length_188_cov_5.392157_g76707_i0forward_frame_2 - 1.2 9.2 9.8 0.27 11.3 5.6 1.9 2 0 0 2 2 2 0 AT hook motif Folate_carrier PF01770.18 NODE_84647_length_188_cov_6.274510_g76706_i0forward_frame_2 - 0.0021 16.8 0.1 0.0022 16.8 0.1 1.0 1 0 0 1 1 1 1 Reduced folate carrier PurK_C PF17769.1 NODE_84646_length_188_cov_9.503268_g76705_i0forward_frame_3 - 0.1 12.3 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylaminoimidazole carboxylase C-terminal domain Zn_Tnp_IS1 PF03811.13 NODE_84646_length_188_cov_9.503268_g76705_i0forward_frame_2 - 0.035 13.8 0.2 0.057 13.1 0.2 1.4 1 0 0 1 1 1 0 InsA N-terminal domain DUF4688 PF15752.5 NODE_84636_length_188_cov_23.411765_g76695_i0forward_frame_3 - 0.026 13.8 0.1 0.026 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4688) RNA_polI_A34 PF08208.11 NODE_84635_length_188_cov_24.235294_g76694_i0forward_frame_3 - 9.5 6.2 17.5 11 6.1 17.5 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Coilin_N PF15862.5 NODE_84635_length_188_cov_24.235294_g76694_i0forward_frame_3 - 9.8 6.0 8.8 11 5.8 8.8 1.1 1 0 0 1 1 1 0 Coilin N-terminus UL21a PF17636.2 NODE_84634_length_188_cov_24.875817_g76693_i0reverse_frame_3 - 0.55 10.3 4.4 0.61 10.1 4.4 1.1 1 0 0 1 1 1 0 Viral Unique Long protein 21a EBA-175_VI PF11556.8 NODE_84631_length_188_cov_26.666667_g76690_i0reverse_frame_3 - 0.0054 17.0 0.7 0.006 16.9 0.7 1.0 1 0 0 1 1 1 1 Erythrocyte binding antigen 175 Fumarate_red_D PF02313.17 NODE_84628_length_188_cov_29.339869_g76687_i0forward_frame_2 - 0.045 13.8 0.2 0.054 13.6 0.2 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit D TPR_1 PF00515.28 NODE_84627_length_188_cov_31.967320_g76686_i0reverse_frame_2 - 0.11 12.4 0.5 3.5 7.6 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF2677 PF10838.8 NODE_84626_length_188_cov_32.496732_g76685_i0reverse_frame_2 - 0.07 13.1 0.0 0.076 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2677) Nodulin_late PF07127.11 NODE_84626_length_188_cov_32.496732_g76685_i0forward_frame_3 - 0.1 13.0 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Late nodulin protein Sbi-IV PF11621.8 NODE_84618_length_188_cov_35.601307_g76677_i0reverse_frame_2 - 0.039 14.3 1.5 0.1 12.9 0.5 1.9 1 1 1 2 2 2 0 C3 binding domain 4 of IgG-bind protein SBI DnaG_DnaB_bind PF08278.11 NODE_84618_length_188_cov_35.601307_g76677_i0reverse_frame_2 - 0.083 13.5 0.2 0.09 13.4 0.2 1.1 1 0 0 1 1 1 0 DNA primase DnaG DnaB-binding Cluap1 PF10234.9 NODE_84618_length_188_cov_35.601307_g76677_i0reverse_frame_2 - 0.1 12.0 3.2 0.098 12.0 3.2 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 Psm4 PF17063.5 NODE_84618_length_188_cov_35.601307_g76677_i0forward_frame_2 - 0.096 13.2 0.8 0.16 12.5 0.8 1.4 1 0 0 1 1 1 0 Phenol-soluble modulin alpha 4 peptide DICT PF10069.9 NODE_84615_length_188_cov_38.751634_g76674_i0forward_frame_3 - 0.13 12.0 0.1 0.15 11.9 0.1 1.0 1 0 0 1 1 1 0 Sensory domain in DIguanylate Cyclases and Two-component system Pex24p PF06398.11 NODE_84614_length_188_cov_39.816993_g76673_i0reverse_frame_2 - 1.5 7.7 3.9 1.5 7.7 3.9 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Thiolase_N PF00108.23 NODE_84612_length_188_cov_40.928105_g76671_i0reverse_frame_2 - 7e-19 68.2 0.1 7e-19 68.2 0.1 1.0 1 0 0 1 1 1 1 Thiolase, N-terminal domain KCNQ_channel PF03520.14 NODE_84610_length_188_cov_41.137255_g76669_i0reverse_frame_2 - 0.18 11.6 0.0 0.2 11.5 0.0 1.0 1 0 0 1 1 1 0 KCNQ voltage-gated potassium channel DUF3948 PF13134.6 NODE_84610_length_188_cov_41.137255_g76669_i0forward_frame_2 - 0.13 12.0 0.1 0.17 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3948) FUSC_2 PF13515.6 NODE_84607_length_188_cov_42.771242_g76666_i0forward_frame_3 - 0.011 15.8 1.8 0.012 15.7 1.8 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein-like Mon2_C PF16206.5 NODE_84604_length_188_cov_44.882353_g76663_i0reverse_frame_3 - 0.083 11.0 0.0 0.083 11.0 0.0 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein DUF1082 PF06449.11 NODE_84597_length_188_cov_55.241830_g76656_i0reverse_frame_3 - 0.019 14.8 0.1 0.029 14.2 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) Transp_Tc5_C PF04236.15 NODE_84589_length_188_cov_63.431373_g76648_i0forward_frame_3 - 0.028 14.8 1.0 0.046 14.1 1.0 1.4 1 0 0 1 1 1 0 Tc5 transposase C-terminal domain Copper-fist PF00649.18 NODE_84581_length_188_cov_75.189542_g76640_i0forward_frame_3 - 0.14 11.7 3.9 5.4 6.6 0.1 2.2 2 0 0 2 2 2 0 Copper fist DNA binding domain Sel1 PF08238.12 NODE_84578_length_188_cov_84.130719_g76637_i0forward_frame_3 - 2.5e-08 34.3 1.4 3.8e-08 33.8 1.4 1.3 1 0 0 1 1 1 1 Sel1 repeat TPR_6 PF13174.6 NODE_84578_length_188_cov_84.130719_g76637_i0forward_frame_3 - 0.44 11.3 2.8 1.6 9.5 2.8 2.1 1 1 0 1 1 1 0 Tetratricopeptide repeat AvrLm4-7 PF18661.1 NODE_84576_length_188_cov_95.326797_g76635_i0forward_frame_2 - 0.083 13.9 3.0 0.1 13.6 2.1 1.6 1 1 1 2 2 2 0 Avirulence Effector AvrLm4-7 Herpes_UL73 PF03554.13 NODE_84574_length_188_cov_99.045752_g76633_i0forward_frame_2 - 0.07 13.1 2.8 0.075 13.0 2.8 1.1 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein NRIP1_repr_2 PF15688.5 NODE_84570_length_188_cov_106.967320_g76629_i0reverse_frame_2 - 0.039 13.9 0.4 0.044 13.7 0.4 1.0 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 2 DUF2403 PF10290.9 NODE_84567_length_188_cov_107.941176_g76626_i0reverse_frame_2 - 0.098 13.1 0.4 0.13 12.8 0.4 1.2 1 0 0 1 1 1 0 Glycine-rich protein domain (DUF2403) Adipogenin PF15202.6 NODE_84567_length_188_cov_107.941176_g76626_i0forward_frame_3 - 0.15 12.1 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Adipogenin DUF1999 PF09390.10 NODE_84565_length_188_cov_121.732026_g76624_i0reverse_frame_3 - 0.079 12.6 0.0 0.079 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) Bim_N PF06773.11 NODE_84563_length_188_cov_139.751634_g76622_i0reverse_frame_3 - 0.034 13.8 0.3 0.068 12.9 0.3 1.5 1 0 0 1 1 1 0 Bim protein N-terminus DUF1102 PF06510.11 NODE_84562_length_188_cov_140.679739_g76621_i0reverse_frame_2 - 0.14 12.3 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1102) Amnionless PF14828.6 NODE_84559_length_188_cov_145.947712_g76618_i0forward_frame_2 - 0.041 12.7 0.2 0.046 12.6 0.2 1.0 1 0 0 1 1 1 0 Amnionless zinc_ribbon_4 PF13717.6 NODE_84556_length_188_cov_154.464052_g76615_i0forward_frame_3 - 0.041 13.8 0.0 0.062 13.2 0.0 1.3 1 0 0 1 1 1 0 zinc-ribbon domain SR-25 PF10500.9 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_3 - 0.01 15.4 7.6 0.011 15.4 7.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Med19 PF10278.9 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_3 - 0.3 11.0 10.3 0.34 10.8 10.3 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 TSGP1 PF07771.11 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_3 - 1.2 9.3 7.9 1.3 9.2 7.9 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 SR-25 PF10500.9 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_2 - 0.0047 16.6 13.9 0.005 16.5 13.9 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein AP3D1 PF06375.11 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_2 - 1 9.6 8.5 1.1 9.5 8.5 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 SR-25 PF10500.9 NODE_84546_length_188_cov_588.660131_g76605_i0forward_frame_3 - 5.3 6.6 8.9 5.2 6.6 8.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CReP_N PF10472.9 NODE_84545_length_188_cov_790.372549_g76604_i0reverse_frame_2 - 0.17 10.7 1.6 0.19 10.5 1.6 1.0 1 0 0 1 1 1 0 eIF2-alpha phosphatase phosphorylation constitutive repressor DUF3169 PF11368.8 NODE_84543_length_188_cov_1746.581699_g76602_i0forward_frame_2 - 0.026 14.0 1.2 0.03 13.8 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) Peptidase_C1 PF00112.23 NODE_84539_length_188_cov_315117.019608_g76598_i0reverse_frame_3 - 1.2e-11 45.1 1.3 1.4e-11 44.9 1.3 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Lamprin PF06403.11 NODE_84538_length_189_cov_0.701299_g76597_i0reverse_frame_3 - 1.4 8.8 11.5 4.5 7.2 11.5 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_84538_length_189_cov_0.701299_g76597_i0reverse_frame_2 - 0.0014 18.6 3.9 0.0016 18.4 3.9 1.1 1 0 0 1 1 1 1 Lamprin Glug PF07581.12 NODE_84532_length_189_cov_0.896104_g76591_i0forward_frame_2 - 0.047 14.1 2.3 0.08 13.4 2.3 1.4 1 0 0 1 1 1 0 The GLUG motif Trp_leader1 PF08055.11 NODE_84529_length_189_cov_0.922078_g76588_i0forward_frame_2 - 0.028 14.1 2.5 0.047 13.4 2.5 1.3 1 0 0 1 1 1 0 Tryptophan leader peptide DZR PF12773.7 NODE_84519_length_189_cov_0.974026_g76578_i0reverse_frame_3 - 0.13 12.3 16.8 0.92 9.6 10.7 2.1 1 1 1 2 2 2 0 Double zinc ribbon DUF983 PF06170.12 NODE_84519_length_189_cov_0.974026_g76578_i0reverse_frame_3 - 0.64 10.5 0.0 0.64 10.5 0.0 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF983) Secapin PF17521.2 NODE_84519_length_189_cov_0.974026_g76578_i0reverse_frame_3 - 8 6.4 11.4 0.69 9.7 5.2 2.2 2 1 0 2 2 2 0 Honey bee peptides DUF4675 PF15720.5 NODE_84519_length_189_cov_0.974026_g76578_i0reverse_frame_2 - 2.2 8.0 14.6 2.4 7.9 14.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4675) GCK PF07802.11 NODE_84516_length_189_cov_0.987013_g76575_i0reverse_frame_2 - 0.13 12.7 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 GCK domain PG_isomerase_N PF18353.1 NODE_84514_length_189_cov_0.993506_g76573_i0forward_frame_3 - 0.019 15.3 0.0 0.024 15.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoglucose isomerase N-terminal domain UBA PF00627.31 NODE_84513_length_189_cov_0.993506_g76572_i0reverse_frame_2 - 0.0074 16.2 0.1 0.012 15.5 0.1 1.3 1 0 0 1 1 1 1 UBA/TS-N domain HOIP-UBA PF16678.5 NODE_84513_length_189_cov_0.993506_g76572_i0reverse_frame_2 - 0.017 15.1 0.6 0.017 15.1 0.6 1.1 1 0 0 1 1 1 0 HOIP UBA domain pair DUF1661 PF07877.11 NODE_84512_length_189_cov_1.000000_g76571_i0reverse_frame_2 - 0.049 13.3 0.5 0.083 12.6 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1661) Pns11_12 PF17464.2 NODE_84511_length_189_cov_1.012987_g76570_i0reverse_frame_2 - 0.22 11.2 2.0 0.22 11.2 2.0 1.0 1 0 0 1 1 1 0 Non-structural protein 11 and 12 MIP PF00230.20 NODE_84510_length_189_cov_1.012987_g76569_i0forward_frame_2 - 4.9e-06 26.4 5.6 5.1e-06 26.4 5.6 1.0 1 0 0 1 1 1 1 Major intrinsic protein POC1 PF10450.9 NODE_84503_length_189_cov_1.025974_g76562_i0forward_frame_3 - 0.0048 15.9 1.3 0.0048 15.9 1.3 1.0 1 0 0 1 1 1 1 POC1 chaperone EloA-BP1 PF15870.5 NODE_84503_length_189_cov_1.025974_g76562_i0forward_frame_2 - 0.18 12.1 0.1 0.2 11.9 0.1 1.1 1 0 0 1 1 1 0 ElonginA binding-protein 1 TAFH PF07531.14 NODE_84499_length_189_cov_1.025974_g76558_i0forward_frame_3 - 0.078 13.1 0.0 0.09 12.9 0.0 1.1 1 0 0 1 1 1 0 NHR1 homology to TAF Alpha_E3_glycop PF01563.16 NODE_84499_length_189_cov_1.025974_g76558_i0forward_frame_3 - 0.1 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Alphavirus E3 glycoprotein FBD PF08387.10 NODE_84498_length_189_cov_1.025974_g76557_i0reverse_frame_3 - 0.052 13.4 0.3 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 FBD DUF4018 PF13210.6 NODE_84498_length_189_cov_1.025974_g76557_i0forward_frame_3 - 0.024 14.4 1.5 0.026 14.3 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) Myb_DNA-binding PF00249.31 NODE_84493_length_189_cov_1.025974_g76552_i0forward_frame_3 - 0.18 12.0 1.2 4.3 7.6 0.2 2.2 1 1 1 2 2 2 0 Myb-like DNA-binding domain Mon2_C PF16206.5 NODE_84489_length_189_cov_1.032468_g76548_i0forward_frame_2 - 0.1 10.7 0.1 0.11 10.7 0.1 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein DUF2403 PF10290.9 NODE_84488_length_189_cov_1.032468_g76547_i0forward_frame_2 - 0.06 13.8 0.0 0.073 13.5 0.0 1.2 1 0 0 1 1 1 0 Glycine-rich protein domain (DUF2403) UNC-50 PF05216.13 NODE_84485_length_189_cov_1.032468_g76544_i0reverse_frame_2 - 0.06 12.9 2.8 0.065 12.8 2.8 1.1 1 0 0 1 1 1 0 UNC-50 family UL11 PF11094.8 NODE_84484_length_189_cov_1.032468_g76543_i0forward_frame_2 - 0.15 12.0 2.9 0.23 11.3 2.9 1.2 1 0 0 1 1 1 0 Membrane-associated tegument protein DUF3678 PF12435.8 NODE_84483_length_189_cov_1.032468_g76542_i0reverse_frame_3 - 0.023 14.1 0.1 0.033 13.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) Phage_30_8 PF06019.11 NODE_84481_length_189_cov_1.032468_g76540_i0reverse_frame_3 - 0.11 12.4 0.2 0.12 12.3 0.2 1.1 1 0 0 1 1 1 0 Phage GP30.8 protein VLPT PF07122.11 NODE_84479_length_189_cov_1.032468_g76538_i0forward_frame_2 - 0.39 10.5 0.3 0.39 10.5 0.3 2.2 2 1 0 2 2 2 0 Variable length PCR target protein (VLPT) Peptidase_M74 PF03411.13 NODE_84476_length_189_cov_1.032468_g76535_i0reverse_frame_2 - 0.023 14.2 0.3 0.024 14.2 0.3 1.0 1 0 0 1 1 1 0 Penicillin-insensitive murein endopeptidase 2TM PF13239.6 NODE_84476_length_189_cov_1.032468_g76535_i0forward_frame_3 - 1.4 9.3 7.9 4.9 7.5 0.2 2.0 1 1 1 2 2 2 0 2TM domain DUF1590 PF07629.11 NODE_84475_length_189_cov_1.032468_g76534_i0forward_frame_2 - 0.66 9.8 5.9 0.25 11.2 1.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1590) DUF1206 PF06724.11 NODE_84472_length_189_cov_1.038961_g76531_i0reverse_frame_3 - 0.012 15.6 0.4 0.015 15.4 0.4 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) Ca_hom_mod PF14798.6 NODE_84472_length_189_cov_1.038961_g76531_i0reverse_frame_3 - 0.047 12.8 0.0 0.047 12.8 0.0 1.1 1 0 0 1 1 1 0 Calcium homeostasis modulator DUF3915 PF13054.6 NODE_84472_length_189_cov_1.038961_g76531_i0reverse_frame_2 - 0.096 12.7 1.1 0.099 12.6 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Apis_Csd PF11671.8 NODE_84472_length_189_cov_1.038961_g76531_i0reverse_frame_2 - 0.82 9.7 3.3 0.93 9.5 3.3 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein SNCAIP_SNCA_bd PF16700.5 NODE_84463_length_189_cov_1.038961_g76522_i0forward_frame_3 - 0.0089 15.7 0.2 0.013 15.1 0.2 1.3 1 0 0 1 1 1 1 Synphilin-1 alpha-Synuclein-binding domain TRAUB PF08164.12 NODE_84463_length_189_cov_1.038961_g76522_i0forward_frame_2 - 0.022 15.2 3.2 0.024 15.1 3.2 1.1 1 0 0 1 1 1 0 Apoptosis-antagonizing transcription factor, C-terminal DUF1891 PF09004.10 NODE_84461_length_189_cov_1.038961_g76520_i0reverse_frame_2 - 0.057 13.0 0.4 0.093 12.3 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1891) Paired_CXXCH_1 PF09699.10 NODE_84455_length_189_cov_1.038961_g76514_i0reverse_frame_3 - 0.021 14.5 0.7 0.028 14.2 0.7 1.3 1 0 0 1 1 1 0 Doubled CXXCH motif (Paired_CXXCH_1) Pinin_SDK_memA PF04696.13 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 1.8 8.6 19.0 2.1 8.4 19.0 1.1 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region OmpH PF03938.14 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 5.9 7.2 20.5 7.3 6.9 20.5 1.0 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) SlyX PF04102.12 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 7 7.3 15.7 8.6 7.1 5.4 2.1 1 1 1 2 2 2 0 SlyX DUF5401 PF17380.2 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 7.9 4.4 16.8 8.6 4.3 16.8 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) GBP_C PF02841.14 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 9.3 5.5 17.4 10 5.4 17.4 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain RuvB_C PF05491.13 NODE_84453_length_189_cov_1.038961_g76512_i0reverse_frame_2 - 0.037 13.9 0.0 0.05 13.5 0.0 1.1 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain Ntox3 PF15536.6 NODE_84452_length_189_cov_1.038961_g76511_i0forward_frame_2 - 0.043 13.9 0.0 0.047 13.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial toxin 3 Y_Y_Y PF07495.13 NODE_84452_length_189_cov_1.038961_g76511_i0forward_frame_2 - 0.15 12.0 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Y_Y_Y domain Antimicrobial17 PF08129.11 NODE_84450_length_189_cov_1.038961_g76509_i0forward_frame_2 - 0.14 12.2 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta enterocin family HlyD_2 PF12700.7 NODE_84449_length_189_cov_1.038961_g76508_i0reverse_frame_2 - 2.5 6.7 7.7 2.8 6.6 7.7 1.0 1 0 0 1 1 1 0 HlyD family secretion protein DUF1582 PF07621.11 NODE_84443_length_189_cov_1.038961_g76502_i0forward_frame_3 - 1.9 8.5 6.0 3.6 7.6 5.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1582) CXCR4_N PF12109.8 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_3 - 0.089 13.0 4.7 0.12 12.6 4.7 1.2 1 0 0 1 1 1 0 CXCR4 Chemokine receptor N terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks406.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks406.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks406.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks406.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DHC_N2 PF08393.13 NODE_84434_length_189_cov_1.038961_g76493_i0forward_frame_2 - 2.7e-05 23.5 0.0 2.7e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 ComZ PF10815.8 NODE_84432_length_189_cov_1.038961_g76491_i0forward_frame_3 - 0.2 11.7 0.0 0.27 11.3 0.0 1.1 1 0 0 1 1 1 0 ComZ DUF3973 PF13119.6 NODE_84432_length_189_cov_1.038961_g76491_i0forward_frame_2 - 0.1 12.7 0.2 0.15 12.2 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) DUF2929 PF11151.8 NODE_84428_length_189_cov_1.038961_g76487_i0reverse_frame_2 - 0.017 15.4 0.7 0.024 14.9 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2929) MID_MedPIWI PF18296.1 NODE_84428_length_189_cov_1.038961_g76487_i0reverse_frame_2 - 0.23 11.2 0.1 0.26 11.0 0.1 1.0 1 0 0 1 1 1 0 MID domain of medPIWI DUF1296 PF06972.11 NODE_84428_length_189_cov_1.038961_g76487_i0forward_frame_3 - 0.0052 16.9 0.2 0.05 13.7 0.2 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF1296) YhfZ_C PF14503.6 NODE_84428_length_189_cov_1.038961_g76487_i0forward_frame_3 - 0.0075 15.8 0.6 0.0081 15.7 0.6 1.1 1 0 0 1 1 1 1 YhfZ C-terminal domain Prok-RING_4 PF14447.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 0.022 14.6 2.9 0.074 12.9 2.5 1.9 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 0.031 14.3 4.7 0.55 10.3 1.9 2.1 1 1 1 2 2 2 0 RING-type zinc-finger Lambda_CIII PF02061.16 NODE_84424_length_189_cov_1.038961_g76483_i0reverse_frame_2 - 0.069 13.2 0.4 0.1 12.7 0.4 1.4 1 1 0 1 1 1 0 Lambda Phage CIII PhoR PF11808.8 NODE_84424_length_189_cov_1.038961_g76483_i0forward_frame_3 - 0.037 14.4 0.2 0.057 13.8 0.2 1.4 1 1 0 1 1 1 0 Phosphate regulon sensor protein PhoR DUF3772 PF12607.8 NODE_84416_length_189_cov_1.038961_g76475_i0reverse_frame_3 - 0.033 13.9 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) IF3_C PF00707.22 NODE_84411_length_189_cov_1.097403_g76470_i0reverse_frame_3 - 1.9e-06 27.7 0.2 2e-06 27.7 0.2 1.0 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain DUF2001 PF09393.10 NODE_84411_length_189_cov_1.097403_g76470_i0reverse_frame_3 - 0.025 14.6 0.1 0.025 14.6 0.1 1.0 1 0 0 1 1 1 0 Phage tail tube protein HMG_CoA_synt_N PF01154.17 NODE_84407_length_189_cov_1.110390_g76466_i0reverse_frame_2 - 0.12 12.3 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A synthase N terminal PGK PF00162.19 NODE_84401_length_189_cov_1.136364_g76460_i0forward_frame_2 - 0.01 14.8 0.0 0.011 14.8 0.0 1.0 1 0 0 1 1 1 0 Phosphoglycerate kinase DUF3788 PF12663.7 NODE_84400_length_189_cov_1.136364_g76459_i0forward_frame_2 - 0.0061 16.5 0.1 0.0062 16.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3788) DUF1564 PF07600.11 NODE_84400_length_189_cov_1.136364_g76459_i0forward_frame_2 - 0.015 15.0 0.6 0.015 15.0 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) Izumo-Ig PF16706.5 NODE_84397_length_189_cov_1.142857_g76456_i0forward_frame_3 - 0.048 13.7 0.0 0.066 13.3 0.0 1.2 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain Croc_4 PF17691.1 NODE_84397_length_189_cov_1.142857_g76456_i0forward_frame_2 - 0.034 14.2 0.4 0.037 14.1 0.4 1.0 1 0 0 1 1 1 0 Contingent replication of cDNA 4 TRF PF08558.10 NODE_84387_length_189_cov_1.181818_g76446_i0reverse_frame_2 - 0.29 10.7 0.0 0.33 10.5 0.0 1.0 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) BTK PF00779.19 NODE_84382_length_189_cov_1.201299_g76441_i0forward_frame_2 - 1.4 8.8 8.4 3.1 7.7 0.4 2.4 2 0 0 2 2 2 0 BTK motif DRE2_N PF16803.5 NODE_84379_length_189_cov_1.207792_g76438_i0reverse_frame_2 - 0.21 11.8 0.0 0.23 11.7 0.0 1.1 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus MEIOC PF15189.6 NODE_84378_length_189_cov_1.214286_g76437_i0reverse_frame_3 - 0.054 13.1 0.0 0.054 13.1 0.0 1.1 1 0 0 1 1 1 0 Meiosis-specific coiled-coil domain-containing protein MEIOC DUF3836 PF12930.7 NODE_84377_length_189_cov_1.214286_g76436_i0forward_frame_2 - 0.03 14.1 0.0 0.035 13.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF3836) Radical_SAM PF04055.21 NODE_84377_length_189_cov_1.214286_g76436_i0forward_frame_2 - 0.061 13.7 2.9 0.072 13.5 2.9 1.1 1 0 0 1 1 1 0 Radical SAM superfamily Vps54 PF07928.12 NODE_84372_length_189_cov_1.227273_g76431_i0forward_frame_2 - 0.04 14.3 2.3 0.048 14.1 2.1 1.2 1 1 0 1 1 1 0 Vps54-like protein Get5_C PF18514.1 NODE_84368_length_189_cov_1.233766_g76427_i0reverse_frame_3 - 0.064 13.0 0.4 3.5 7.4 0.1 2.1 2 0 0 2 2 2 0 Get5 C-terminal domain FeoB_associated PF12669.7 NODE_84364_length_189_cov_1.266234_g76423_i0reverse_frame_2 - 0.045 14.2 0.1 0.057 13.8 0.1 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Corona_nucleoca PF00937.18 NODE_84362_length_189_cov_1.272727_g76421_i0forward_frame_3 - 0.3 10.1 3.1 0.32 10.0 3.1 1.1 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein PKS_DE PF18369.1 NODE_84359_length_189_cov_1.279221_g76418_i0forward_frame_2 - 0.029 14.9 0.0 0.039 14.5 0.0 1.2 1 0 0 1 1 1 0 Polyketide synthase dimerisation element domain DrrA_P4M PF14860.6 NODE_84357_length_189_cov_1.292208_g76416_i0reverse_frame_2 - 0.012 15.4 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain Trm5_N PF18093.1 NODE_84355_length_189_cov_1.292208_g76414_i0reverse_frame_2 - 0.0062 16.4 0.0 0.0093 15.8 0.0 1.3 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain Adenine_glyco PF03352.13 NODE_84355_length_189_cov_1.292208_g76414_i0reverse_frame_2 - 0.13 12.0 0.1 0.14 11.9 0.1 1.0 1 0 0 1 1 1 0 Methyladenine glycosylase LSPR PF06049.12 NODE_84348_length_189_cov_1.298701_g76407_i0reverse_frame_2 - 0.17 11.8 3.9 0.5 10.4 0.2 3.0 2 0 0 2 2 2 0 Coagulation Factor V LSPD Repeat DEAD_2 PF06733.15 NODE_84346_length_189_cov_1.298701_g76405_i0forward_frame_2 - 3.8e-08 33.2 0.0 5.1e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 DEAD_2 DUF3866 PF12982.7 NODE_84346_length_189_cov_1.298701_g76405_i0forward_frame_2 - 0.13 11.3 0.0 0.14 11.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3866) DUF3420 PF11900.8 NODE_84343_length_189_cov_1.298701_g76402_i0forward_frame_3 - 0.038 14.1 0.2 0.066 13.4 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3420) AbLIM_anchor PF16182.5 NODE_84339_length_189_cov_1.298701_g76398_i0reverse_frame_2 - 0.18 11.6 0.0 0.21 11.4 0.0 1.0 1 0 0 1 1 1 0 Putative adherens-junction anchoring region of AbLIM Frag1 PF10277.9 NODE_84338_length_189_cov_1.298701_g76397_i0forward_frame_3 - 0.058 12.9 3.4 0.063 12.8 3.4 1.0 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family MRAP PF15183.6 NODE_84338_length_189_cov_1.298701_g76397_i0forward_frame_3 - 1.8 8.6 6.3 1.9 8.5 6.3 1.2 1 1 0 1 1 1 0 Melanocortin-2 receptor accessory protein family VPS38 PF17649.1 NODE_84328_length_189_cov_1.350649_g76387_i0reverse_frame_3 - 0.094 11.6 0.5 0.1 11.5 0.5 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting 38 ABA_GPCR PF12430.8 NODE_84328_length_189_cov_1.350649_g76387_i0forward_frame_3 - 0.017 14.9 0.1 0.017 14.9 0.1 1.1 1 0 0 1 1 1 0 Abscisic acid G-protein coupled receptor UvrD_C_2 PF13538.6 NODE_84327_length_189_cov_1.357143_g76386_i0forward_frame_2 - 0.002 17.9 0.1 0.0059 16.4 0.1 1.8 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 NODE_84327_length_189_cov_1.357143_g76386_i0forward_frame_2 - 0.024 14.4 0.0 0.028 14.2 0.0 1.1 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase TPR_12 PF13424.6 NODE_84326_length_189_cov_1.363636_g76385_i0reverse_frame_3 - 2.1e-06 27.9 1.0 2.8e-06 27.5 1.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_84326_length_189_cov_1.363636_g76385_i0reverse_frame_3 - 0.012 15.7 4.2 0.015 15.4 4.2 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_84326_length_189_cov_1.363636_g76385_i0reverse_frame_3 - 0.039 13.8 0.6 0.071 13.0 0.6 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4507 PF14964.6 NODE_84326_length_189_cov_1.363636_g76385_i0forward_frame_2 - 0.085 11.8 0.4 0.084 11.8 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4507) Prok-RING_1 PF14446.6 NODE_84325_length_189_cov_1.363636_g76384_i0forward_frame_3 - 0.068 13.1 2.0 0.085 12.8 2.0 1.1 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF2884 PF11101.8 NODE_84325_length_189_cov_1.363636_g76384_i0forward_frame_2 - 4.1e-07 29.7 0.0 4.2e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2884) NB-ARC PF00931.22 NODE_84325_length_189_cov_1.363636_g76384_i0forward_frame_2 - 0.018 14.2 0.0 0.019 14.1 0.0 1.0 1 0 0 1 1 1 0 NB-ARC domain TetR_C_12 PF16914.5 NODE_84322_length_189_cov_1.383117_g76381_i0forward_frame_2 - 0.0056 16.8 0.0 0.0066 16.6 0.0 1.1 1 0 0 1 1 1 1 Bacterial transcriptional repressor C-terminal DUF748 PF05359.11 NODE_84320_length_189_cov_1.389610_g76379_i0reverse_frame_3 - 0.062 13.5 0.0 0.072 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF748) DUF5520 PF17658.1 NODE_84317_length_189_cov_1.422078_g76376_i0reverse_frame_2 - 0.068 12.3 0.0 0.075 12.1 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5520) Ery_res_leader1 PF08051.11 NODE_84316_length_189_cov_1.422078_g76375_i0reverse_frame_2 - 0.072 13.1 0.3 0.27 11.4 0.0 2.2 2 0 0 2 2 2 0 Erythromycin resistance leader peptide TTc_toxin_rep PF18807.1 NODE_84316_length_189_cov_1.422078_g76375_i0forward_frame_3 - 0.072 12.9 0.9 0.48 10.3 0.1 2.2 2 0 0 2 2 2 0 Tripartite Tc toxins repeat UPF0139 PF03669.13 NODE_84315_length_189_cov_1.422078_g76374_i0forward_frame_3 - 0.11 12.4 2.5 0.12 12.2 2.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) DCR PF14047.6 NODE_84309_length_189_cov_1.454545_g76368_i0reverse_frame_3 - 0.021 15.0 0.6 0.029 14.6 0.6 1.2 1 0 0 1 1 1 0 Dppa2/4 conserved region Ion_trans PF00520.31 NODE_84307_length_189_cov_1.461039_g76366_i0reverse_frame_2 - 1.2e-05 24.6 0.1 1.2e-05 24.6 0.1 1.1 1 0 0 1 1 1 1 Ion transport protein Histidinol_dh PF00815.20 NODE_84306_length_189_cov_1.467532_g76365_i0forward_frame_3 - 2.2e-21 76.4 0.2 2.3e-21 76.3 0.2 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase DUF1614 PF07758.11 NODE_84306_length_189_cov_1.467532_g76365_i0forward_frame_3 - 0.069 13.1 0.1 0.074 13.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1614) TrbI_Ftype PF09677.10 NODE_84305_length_189_cov_1.487013_g76364_i0reverse_frame_2 - 0.11 12.9 0.2 0.12 12.6 0.2 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) DUF4266 PF14086.6 NODE_84305_length_189_cov_1.487013_g76364_i0reverse_frame_2 - 0.37 11.8 2.3 8.9 7.4 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4266) Ureide_permease PF07168.11 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 0.26 10.0 5.4 0.28 9.9 5.4 1.0 1 0 0 1 1 1 0 Ureide permease FAM176 PF14851.6 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 1.9 8.1 6.6 2.1 8.0 6.6 1.1 1 0 0 1 1 1 0 FAM176 family Spt20 PF12090.8 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 4 7.0 22.4 3.8 7.0 22.4 1.0 1 0 0 1 1 1 0 Spt20 family DUF3464 PF11947.8 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 5.5 6.7 8.8 6.1 6.6 8.8 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 DUF4834 PF16118.5 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 8 7.5 12.7 8.9 7.4 12.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) vMSA PF00695.19 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_2 - 0.17 11.0 3.0 0.17 11.0 3.0 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Mucin PF01456.17 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_2 - 0.39 10.7 15.1 0.4 10.7 15.1 1.0 1 0 0 1 1 1 0 Mucin-like glycoprotein Tir_receptor_C PF07489.11 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_2 - 1.1 9.2 8.9 1.3 9.0 8.9 1.1 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) C-terminus MGC-24 PF05283.11 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_2 - 6.4 7.2 8.5 7.1 7.1 8.5 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF2093 PF09866.9 NODE_84299_length_189_cov_1.500000_g76358_i0forward_frame_3 - 0.33 10.4 1.7 12 5.4 0.3 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2093) lci PF12197.8 NODE_84295_length_189_cov_1.525974_g76354_i0forward_frame_3 - 0.095 12.5 0.3 0.13 12.1 0.3 1.1 1 0 0 1 1 1 0 Bacillus cereus group antimicrobial protein DUF5388 PF17363.2 NODE_84293_length_189_cov_1.525974_g76352_i0forward_frame_2 - 0.061 13.5 0.2 0.075 13.2 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5388) Form-deh_trans PF09163.11 NODE_84290_length_189_cov_1.532468_g76349_i0forward_frame_2 - 0.12 12.1 0.1 0.22 11.3 0.0 1.5 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Rtt106 PF08512.12 NODE_84288_length_189_cov_1.538961_g76347_i0reverse_frame_2 - 0.011 16.1 0.1 0.013 15.9 0.1 1.1 1 0 0 1 1 1 0 Histone chaperone Rttp106-like SAC3_GANP PF03399.16 NODE_84284_length_189_cov_1.545455_g76343_i0forward_frame_3 - 0.077 12.4 0.2 0.078 12.4 0.2 1.0 1 0 0 1 1 1 0 SAC3/GANP family DUF2895 PF11444.8 NODE_84281_length_189_cov_1.551948_g76340_i0forward_frame_2 - 0.12 11.8 0.1 0.12 11.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2895) GTP_cyclohydroI PF01227.22 NODE_84276_length_189_cov_1.551948_g76335_i0forward_frame_3 - 0.032 13.7 0.1 0.032 13.7 0.1 1.0 1 0 0 1 1 1 0 GTP cyclohydrolase I SUZ-C PF12901.7 NODE_84270_length_189_cov_1.558442_g76329_i0reverse_frame_2 - 0.046 13.7 0.1 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 SUZ-C motif MVL PF12151.8 NODE_84264_length_189_cov_1.558442_g76323_i0forward_frame_2 - 0.88 9.5 4.2 7.3 6.5 0.5 2.7 2 1 0 2 2 2 0 Mannan-binding protein V_ATPase_I PF01496.19 NODE_84254_length_189_cov_1.571429_g76313_i0reverse_frame_3 - 5.6e-06 24.6 0.0 5.6e-06 24.6 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family ITAM_Cys-rich PF10538.9 NODE_84254_length_189_cov_1.571429_g76313_i0reverse_frame_3 - 0.014 15.2 0.0 0.019 14.7 0.0 1.3 1 0 0 1 1 1 0 Immunoreceptor tyrosine-based activation motif EutK_C PF16365.5 NODE_84253_length_189_cov_1.584416_g76312_i0reverse_frame_2 - 0.12 12.5 0.1 0.16 12.0 0.1 1.3 1 1 0 1 1 1 0 Ethanolamine utilization protein EutK C-terminus Endonuclease_7 PF02945.15 NODE_84250_length_189_cov_1.590909_g76309_i0reverse_frame_3 - 0.0092 15.9 1.5 0.0092 15.9 1.5 1.1 1 0 0 1 1 1 1 Recombination endonuclease VII DUF3290 PF11694.8 NODE_84247_length_189_cov_1.597403_g76306_i0reverse_frame_2 - 0.1 12.6 5.9 0.11 12.4 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) Presenilin PF01080.17 NODE_84247_length_189_cov_1.597403_g76306_i0reverse_frame_2 - 1.7 7.3 8.4 1.9 7.2 8.4 1.0 1 0 0 1 1 1 0 Presenilin CutC PF03932.14 NODE_84243_length_189_cov_1.623377_g76302_i0reverse_frame_3 - 1.2e-15 57.6 0.2 1.3e-15 57.5 0.2 1.0 1 0 0 1 1 1 1 CutC family gerPA PF10676.9 NODE_84238_length_189_cov_1.649351_g76297_i0reverse_frame_2 - 0.11 12.8 0.2 0.12 12.7 0.2 1.2 1 0 0 1 1 1 0 Spore germination protein gerPA/gerPF zf-LITAF-like PF10601.9 NODE_84234_length_189_cov_1.662338_g76293_i0forward_frame_3 - 0.031 14.5 0.4 0.031 14.5 0.4 1.5 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain CCSMST1 PF15013.6 NODE_84234_length_189_cov_1.662338_g76293_i0forward_frame_2 - 2.3 8.4 4.5 1.5 9.1 3.2 1.4 1 1 0 1 1 1 0 CCSMST1 family WBP-1 PF11669.8 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.002 18.8 0.2 0.0021 18.7 0.2 1.0 1 0 0 1 1 1 1 WW domain-binding protein 1 MRAP PF15183.6 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.027 14.4 0.3 0.032 14.2 0.3 1.1 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Orf78 PF06024.12 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.054 13.8 0.4 0.059 13.7 0.4 1.1 1 0 0 1 1 1 0 Orf78 (ac78) KIX PF02172.16 NODE_84228_length_189_cov_1.727273_g76287_i0forward_frame_2 - 0.0011 19.2 1.5 0.0013 19.0 1.5 1.1 1 0 0 1 1 1 1 KIX domain YqeY PF09424.10 NODE_84228_length_189_cov_1.727273_g76287_i0forward_frame_2 - 0.011 15.8 2.0 0.011 15.8 2.0 1.1 1 0 0 1 1 1 0 Yqey-like protein Ion_trans PF00520.31 NODE_84222_length_189_cov_1.759740_g76281_i0forward_frame_2 - 0.006 15.8 1.7 0.0062 15.8 1.7 1.0 1 0 0 1 1 1 1 Ion transport protein Kelch_5 PF13854.6 NODE_84218_length_189_cov_1.798701_g76277_i0reverse_frame_2 - 0.012 15.6 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Kelch motif DUF5575 PF17738.1 NODE_84216_length_189_cov_1.805195_g76275_i0forward_frame_3 - 0.037 13.1 0.1 0.037 13.1 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5575) Toprim_C_rpt PF13368.6 NODE_84215_length_189_cov_1.805195_g76274_i0forward_frame_2 - 0.071 13.1 0.0 0.086 12.8 0.0 1.2 1 0 0 1 1 1 0 Topoisomerase C-terminal repeat MBDa PF16564.5 NODE_84213_length_189_cov_1.811688_g76272_i0reverse_frame_3 - 0.16 12.1 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 p55-binding region of Methyl-CpG-binding domain proteins MBD LAGLIDADG_3 PF14528.6 NODE_84211_length_189_cov_1.818182_g76270_i0forward_frame_2 - 0.032 14.5 0.0 0.044 14.1 0.0 1.2 1 0 0 1 1 1 0 LAGLIDADG-like domain Bact_transglu_N PF08379.10 NODE_84208_length_189_cov_1.824675_g76267_i0reverse_frame_2 - 0.044 14.7 0.0 0.052 14.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial transglutaminase-like N-terminal region Phtf-FEM1B_bdg PF12129.8 NODE_84206_length_189_cov_1.837662_g76265_i0forward_frame_2 - 0.12 12.2 0.9 0.11 12.3 0.9 1.0 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor DUF3637 PF12337.8 NODE_84204_length_189_cov_1.863636_g76263_i0reverse_frame_3 - 0.035 14.4 0.0 0.059 13.7 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3637) COX7B PF05392.11 NODE_84204_length_189_cov_1.863636_g76263_i0reverse_frame_3 - 0.15 11.7 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase chain VIIB DUF3953 PF13129.6 NODE_84203_length_189_cov_1.876623_g76262_i0forward_frame_3 - 0.0024 17.6 5.5 0.0036 17.0 5.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3953) p450 PF00067.22 NODE_84202_length_189_cov_1.876623_g76261_i0forward_frame_3 - 3.9e-10 39.1 0.0 4e-10 39.1 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 ExoD PF06055.12 NODE_84198_length_189_cov_1.909091_g76257_i0reverse_frame_3 - 0.027 13.8 2.6 0.032 13.6 2.6 1.0 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD HTH_Tnp_Tc3_2 PF01498.18 NODE_84193_length_189_cov_1.922078_g76252_i0reverse_frame_2 - 0.016 15.5 0.2 0.023 14.9 0.2 1.3 1 0 0 1 1 1 0 Transposase Extensin_1 PF02095.15 NODE_84187_length_189_cov_1.967532_g76246_i0reverse_frame_2 - 0.52 10.6 11.6 0.97 9.8 2.0 2.5 2 0 0 2 2 2 0 Extensin-like protein repeat PD40 PF07676.12 NODE_84185_length_189_cov_1.980519_g76244_i0reverse_frame_3 - 0.0043 16.9 0.1 0.012 15.5 0.1 1.8 2 0 0 2 2 2 1 WD40-like Beta Propeller Repeat Dopey_N PF04118.14 NODE_84183_length_189_cov_1.993506_g76242_i0reverse_frame_2 - 0.081 12.0 0.3 0.092 11.8 0.3 1.0 1 0 0 1 1 1 0 Dopey, N-terminal DUF4672 PF15716.5 NODE_84179_length_189_cov_2.045455_g76238_i0forward_frame_3 - 0.063 12.9 0.1 0.065 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) Ribosomal_S5_C PF03719.15 NODE_84178_length_189_cov_2.045455_g76237_i0reverse_frame_3 - 0.085 12.3 0.1 3.4 7.2 0.0 2.1 2 0 0 2 2 2 0 Ribosomal protein S5, C-terminal domain CRM1_repeat PF18777.1 NODE_84177_length_189_cov_2.058442_g76236_i0forward_frame_2 - 0.055 13.0 1.9 0.09 12.3 1.9 1.4 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat 2C_adapt PF08793.10 NODE_84165_length_189_cov_2.071429_g76224_i0reverse_frame_3 - 0.084 13.1 1.6 0.13 12.5 1.6 1.3 1 0 0 1 1 1 0 2-cysteine adaptor domain IgaA PF07095.11 NODE_84162_length_189_cov_2.077922_g76221_i0forward_frame_3 - 0.07 11.1 0.8 0.073 11.0 0.8 1.0 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA Arm-DNA-bind_1 PF09003.10 NODE_84152_length_189_cov_2.175325_g76211_i0reverse_frame_2 - 0.039 14.1 0.0 0.045 13.9 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage lambda integrase, Arm DNA-binding domain Pkinase PF00069.25 NODE_84150_length_189_cov_2.181818_g76209_i0forward_frame_2 - 5.6e-09 35.8 0.0 5.6e-09 35.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_84150_length_189_cov_2.181818_g76209_i0forward_frame_2 - 1.4e-07 31.1 0.0 1.4e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Tachystatin_A PF11406.8 NODE_84146_length_189_cov_2.207792_g76205_i0reverse_frame_2 - 0.0042 17.1 3.7 0.0061 16.6 3.7 1.4 1 1 0 1 1 1 1 Antimicrobial peptide tachystatin A PPDK_N PF01326.19 NODE_84146_length_189_cov_2.207792_g76205_i0forward_frame_2 - 4.5e-12 45.9 0.0 5.1e-12 45.7 0.0 1.0 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Transp_inhibit PF18791.1 NODE_84146_length_189_cov_2.207792_g76205_i0forward_frame_2 - 0.15 11.6 1.5 0.32 10.5 0.0 2.1 1 1 1 2 2 2 0 Transport inhibitor response 1 protein domain TnpB_IS66 PF05717.13 NODE_84144_length_189_cov_2.220779_g76203_i0forward_frame_3 - 0.027 14.4 0.0 0.027 14.4 0.0 1.1 1 0 0 1 1 1 0 IS66 Orf2 like protein ACR_tran PF00873.19 NODE_84144_length_189_cov_2.220779_g76203_i0forward_frame_3 - 0.22 9.2 0.0 0.24 9.0 0.0 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF1768 PF08719.11 NODE_84142_length_189_cov_2.240260_g76201_i0reverse_frame_3 - 5.4e-12 46.2 0.1 6e-12 46.1 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) UPF0565 PF10561.9 NODE_84142_length_189_cov_2.240260_g76201_i0reverse_frame_3 - 0.2 10.9 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Methyltransf_25 PF13649.6 NODE_84138_length_189_cov_2.253247_g76197_i0forward_frame_2 - 4.4e-05 24.1 0.0 4.6e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_84138_length_189_cov_2.253247_g76197_i0forward_frame_2 - 0.0001 22.9 0.0 0.00011 22.8 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_84138_length_189_cov_2.253247_g76197_i0forward_frame_2 - 0.00019 21.3 0.0 0.00021 21.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain GFO_IDH_MocA PF01408.22 NODE_84136_length_189_cov_2.298701_g76195_i0forward_frame_3 - 8.3e-05 23.4 0.0 8.8e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Cas6b_C PF17262.2 NODE_84135_length_189_cov_2.298701_g76194_i0forward_frame_3 - 0.069 13.2 1.0 0.074 13.2 1.0 1.1 1 0 0 1 1 1 0 Cas6b C-terminal domain ATP-grasp PF02222.22 NODE_84133_length_189_cov_2.324675_g76192_i0forward_frame_3 - 0.14 11.8 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 ATP-grasp domain FYVE_2 PF02318.16 NODE_84130_length_189_cov_2.337662_g76189_i0reverse_frame_3 - 0.16 12.1 4.1 0.16 12.2 4.1 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger zf-FCS PF06467.14 NODE_84129_length_189_cov_2.337662_g76188_i0forward_frame_3 - 0.09 12.7 3.4 0.15 12.0 3.4 1.5 1 1 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif DUF2527 PF10736.9 NODE_84127_length_189_cov_2.370130_g76186_i0reverse_frame_2 - 0.13 12.1 0.4 0.26 11.2 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) IcmF_C PF06744.12 NODE_84121_length_189_cov_2.402597_g76180_i0forward_frame_3 - 0.00025 20.7 0.1 0.00026 20.7 0.1 1.0 1 0 0 1 1 1 1 Type VI secretion protein IcmF C-terminal OTT_1508_deam PF14441.6 NODE_84112_length_189_cov_2.597403_g76171_i0reverse_frame_2 - 0.049 13.7 2.3 0.052 13.6 2.3 1.3 1 1 0 1 1 1 0 OTT_1508-like deaminase DUF4818 PF16089.5 NODE_84111_length_189_cov_2.616883_g76170_i0reverse_frame_2 - 0.024 15.1 0.7 0.028 14.9 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) Peptidase_C74 PF12387.8 NODE_84110_length_189_cov_2.629870_g76169_i0reverse_frame_2 - 0.23 10.9 0.7 0.24 10.8 0.7 1.1 1 0 0 1 1 1 0 Pestivirus NS2 peptidase Kelch_2 PF07646.15 NODE_84110_length_189_cov_2.629870_g76169_i0reverse_frame_2 - 0.62 10.1 3.6 3.8 7.6 0.6 2.4 2 0 0 2 2 2 0 Kelch motif RAP1 PF07218.11 NODE_84109_length_189_cov_2.649351_g76168_i0reverse_frame_2 - 1.6 6.9 5.8 1.6 6.9 5.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Pkinase PF00069.25 NODE_84108_length_189_cov_2.688312_g76167_i0reverse_frame_2 - 0.00055 19.4 0.0 0.0007 19.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF4752 PF15944.5 NODE_84108_length_189_cov_2.688312_g76167_i0forward_frame_3 - 0.12 12.4 1.8 0.13 12.3 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) TMEM132D_N PF15705.5 NODE_84107_length_189_cov_2.759740_g76166_i0forward_frame_3 - 0.011 15.5 0.1 0.012 15.4 0.1 1.1 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, N-term GlgS PF08971.11 NODE_84106_length_189_cov_2.792208_g76165_i0forward_frame_2 - 6.3e-26 90.2 0.2 7.1e-26 90.0 0.2 1.0 1 0 0 1 1 1 1 Glycogen synthesis protein Corona_nucleoca PF00937.18 NODE_84105_length_189_cov_2.811688_g76164_i0forward_frame_2 - 0.65 9.0 5.3 0.58 9.1 5.3 1.1 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein PrcB_C PF14343.6 NODE_84099_length_189_cov_2.993506_g76158_i0forward_frame_2 - 0.047 13.8 0.0 0.064 13.4 0.0 1.2 1 0 0 1 1 1 0 PrcB C-terminal Arc_C PF18162.1 NODE_84098_length_189_cov_3.012987_g76157_i0forward_frame_2 - 0.072 12.9 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Arc C-lobe PBP5_C PF07943.13 NODE_84097_length_189_cov_3.025974_g76156_i0reverse_frame_2 - 1.9e-11 44.1 0.0 2e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain OTOS PF15182.6 NODE_84096_length_189_cov_3.032468_g76155_i0reverse_frame_3 - 0.029 14.3 0.1 0.031 14.2 0.1 1.2 1 0 0 1 1 1 0 Otospiralin Integrase_H2C2 PF17921.1 NODE_84096_length_189_cov_3.032468_g76155_i0reverse_frame_3 - 0.13 12.3 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 Integrase zinc binding domain DUF3504 PF12012.8 NODE_84095_length_189_cov_3.038961_g76154_i0forward_frame_3 - 0.018 15.0 0.2 0.02 14.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3504) Defensin_int PF17858.1 NODE_84091_length_189_cov_3.220779_g76150_i0reverse_frame_2 - 0.0057 16.6 2.6 0.0078 16.2 2.6 1.3 1 0 0 1 1 1 1 Platypus intermediate defensin-like peptide GAS PF13851.6 NODE_84090_length_189_cov_3.331169_g76149_i0reverse_frame_2 - 0.0032 16.9 4.5 0.0036 16.7 4.5 1.0 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding zf-HC5HC2H PF13771.6 NODE_84086_length_189_cov_3.759740_g76145_i0reverse_frame_2 - 0.019 15.2 1.9 0.019 15.2 1.9 1.1 1 0 0 1 1 1 0 PHD-like zinc-binding domain rve PF00665.26 NODE_84084_length_189_cov_4.259740_g76143_i0forward_frame_3 - 2.3e-05 24.6 0.0 2.4e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 Integrase core domain zf-BED PF02892.15 NODE_84082_length_189_cov_4.396104_g76141_i0forward_frame_3 - 0.071 13.1 3.0 0.14 12.2 2.9 1.6 1 1 0 1 1 1 0 BED zinc finger NEXCaM_BD PF16644.5 NODE_84080_length_189_cov_4.512987_g76139_i0reverse_frame_3 - 0.0026 18.0 2.7 0.0026 18.0 2.7 1.1 1 0 0 1 1 1 1 Regulatory region of Na+/H+ exchanger NHE binds to calmodulin fn3_6 PF17766.1 NODE_84078_length_189_cov_4.766234_g76137_i0forward_frame_2 - 0.1 12.8 0.0 0.11 12.7 0.0 1.0 1 0 0 1 1 1 0 Fibronectin type-III domain Peptidase_S74 PF13884.6 NODE_84077_length_189_cov_4.935065_g76136_i0reverse_frame_3 - 0.068 13.5 0.0 0.097 13.0 0.0 1.3 1 0 0 1 1 1 0 Chaperone of endosialidase DUF5435 PF17503.2 NODE_84074_length_189_cov_7.188312_g76133_i0reverse_frame_2 - 0.02 14.6 0.4 0.021 14.6 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5435) DUF1013 PF06242.11 NODE_84073_length_189_cov_8.064935_g76132_i0reverse_frame_3 - 0.077 13.0 0.1 0.091 12.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1013) Phospholamban PF04272.14 NODE_84073_length_189_cov_8.064935_g76132_i0forward_frame_3 - 0.27 10.7 4.0 0.45 10.0 4.0 1.3 1 0 0 1 1 1 0 Phospholamban Corona_NSP4_C PF16348.5 NODE_84070_length_189_cov_13.149351_g76129_i0forward_frame_3 - 0.063 14.1 0.3 0.069 14.0 0.3 1.1 1 0 0 1 1 1 0 Coronavirus nonstructural protein 4 C-terminus DUF1515 PF07439.11 NODE_84069_length_189_cov_13.824675_g76128_i0reverse_frame_2 - 0.052 13.6 0.1 0.052 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) zf_C2H2_6 PF18450.1 NODE_84069_length_189_cov_13.824675_g76128_i0forward_frame_3 - 0.022 14.4 0.7 0.022 14.4 0.7 1.6 2 0 0 2 2 2 0 Zinc Finger domain zf_C2H2_6 PF18450.1 NODE_84069_length_189_cov_13.824675_g76128_i0forward_frame_2 - 0.022 14.5 0.3 0.04 13.6 0.3 1.5 1 0 0 1 1 1 0 Zinc Finger domain C_tripleX PF02363.19 NODE_84069_length_189_cov_13.824675_g76128_i0forward_frame_2 - 7.3 7.1 16.0 0.87 10.0 9.6 2.5 2 0 0 2 2 2 0 Cysteine rich repeat DUF2116 PF09889.9 NODE_84068_length_189_cov_14.233766_g76127_i0reverse_frame_3 - 0.16 12.0 2.3 0.19 11.8 2.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Albumin_I PF08027.11 NODE_84066_length_189_cov_16.142857_g76125_i0forward_frame_3 - 0.047 13.3 2.8 0.068 12.8 2.8 1.3 1 0 0 1 1 1 0 Albumin I chain b Pro-kuma_activ PF09286.11 NODE_84065_length_189_cov_16.636364_g76124_i0reverse_frame_2 - 0.11 12.8 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Pro-kumamolisin, activation domain YajC PF02699.15 NODE_84063_length_189_cov_18.772727_g76122_i0forward_frame_3 - 0.2 11.6 0.6 0.23 11.4 0.6 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit DUF2249 PF10006.9 NODE_84060_length_189_cov_23.090909_g76119_i0reverse_frame_2 - 0.2 11.6 0.0 0.27 11.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) Birna_VP3 PF01767.16 NODE_84058_length_189_cov_24.272727_g76117_i0reverse_frame_3 - 0.043 13.9 5.3 0.044 13.9 5.3 1.0 1 0 0 1 1 1 0 Birnavirus VP3 protein Gpi16 PF04113.14 NODE_84058_length_189_cov_24.272727_g76117_i0forward_frame_3 - 0.18 10.2 0.5 0.22 9.9 0.5 1.0 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component NLRC4_HD PF17889.1 NODE_84057_length_189_cov_24.331169_g76116_i0reverse_frame_2 - 0.012 15.9 0.0 0.013 15.8 0.0 1.1 1 0 0 1 1 1 0 NLRC4 helical domain DUF2232 PF09991.9 NODE_84055_length_189_cov_25.649351_g76114_i0forward_frame_2 - 0.049 12.8 0.6 0.054 12.7 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2232) Trp_oprn_chp PF09534.10 NODE_84054_length_189_cov_25.987013_g76113_i0reverse_frame_2 - 0.066 13.0 0.3 0.089 12.6 0.3 1.2 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) TPK_B1_binding PF04265.14 NODE_84050_length_189_cov_27.623377_g76109_i0forward_frame_3 - 0.062 13.0 0.0 0.17 11.6 0.0 1.6 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Phage_integrase PF00589.22 NODE_84047_length_189_cov_29.889610_g76106_i0reverse_frame_2 - 0.064 13.0 0.1 0.065 13.0 0.1 1.1 1 0 0 1 1 1 0 Phage integrase family TMEM125 PF15109.6 NODE_84047_length_189_cov_29.889610_g76106_i0forward_frame_3 - 0.11 12.9 0.0 0.13 12.6 0.0 1.0 1 0 0 1 1 1 0 TMEM125 protein family TPR_20 PF14561.6 NODE_84044_length_189_cov_32.201299_g76103_i0reverse_frame_2 - 0.0016 18.8 0.8 0.0018 18.6 0.8 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat COX7a PF02238.15 NODE_84042_length_189_cov_32.883117_g76101_i0reverse_frame_3 - 0.1 13.0 0.9 0.23 11.9 0.1 1.8 1 1 1 2 2 2 0 Cytochrome c oxidase subunit VII Antimicrobial_6 PF08036.11 NODE_84040_length_189_cov_32.948052_g76099_i0forward_frame_3 - 0.042 13.9 2.3 0.17 12.0 0.7 2.0 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide CDH PF02611.15 NODE_84039_length_189_cov_33.857143_g76098_i0reverse_frame_3 - 0.1 12.2 0.0 0.12 12.0 0.0 1.0 1 0 0 1 1 1 0 CDP-diacylglycerol pyrophosphatase YMF19 PF02326.15 NODE_84038_length_189_cov_34.746753_g76097_i0forward_frame_2 - 0.066 14.0 1.3 0.076 13.8 1.3 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks407.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks407.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks407.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks407.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:31:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4312 PF14189.6 NODE_84037_length_189_cov_36.681818_g76096_i0forward_frame_2 - 2.5 8.2 4.1 3.6 7.7 4.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) Rubredoxin_2 PF18073.1 NODE_84030_length_189_cov_39.662338_g76089_i0forward_frame_2 - 0.11 12.2 0.4 6.5 6.6 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain HECT_2 PF09814.9 NODE_84028_length_189_cov_40.487013_g76087_i0reverse_frame_3 - 0.055 12.3 0.0 0.055 12.3 0.0 1.0 1 0 0 1 1 1 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding MORN PF02493.20 NODE_84027_length_189_cov_40.785714_g76086_i0forward_frame_2 - 9.7e-05 22.0 2.6 0.00017 21.3 2.6 1.5 1 0 0 1 1 1 1 MORN repeat SR-25 PF10500.9 NODE_84026_length_189_cov_41.077922_g76085_i0reverse_frame_2 - 0.1 12.2 5.7 0.11 12.1 5.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RCC1 PF00415.18 NODE_84024_length_189_cov_43.324675_g76083_i0reverse_frame_3 - 1.3e-11 45.0 0.6 7.3e-08 32.9 0.0 2.0 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_84024_length_189_cov_43.324675_g76083_i0reverse_frame_3 - 1.8e-07 30.8 0.7 2.3e-07 30.4 0.7 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat GSK-3_bind PF05350.12 NODE_84020_length_189_cov_44.279221_g76079_i0forward_frame_3 - 0.019 14.3 2.1 0.019 14.3 2.1 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding PDDEXK_1 PF12705.7 NODE_84017_length_189_cov_47.532468_g76076_i0forward_frame_2 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Cadherin_tail PF15974.5 NODE_84011_length_189_cov_54.383117_g76070_i0forward_frame_2 - 0.054 13.8 1.3 0.054 13.8 1.3 1.1 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region Albumin_I_a PF16720.5 NODE_84009_length_189_cov_56.435065_g76068_i0reverse_frame_2 - 0.028 14.3 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Albumin I chain a SR-25 PF10500.9 NODE_84007_length_189_cov_58.019481_g76066_i0forward_frame_2 - 0.058 13.0 8.2 0.062 12.9 8.2 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CBM_26 PF16824.5 NODE_84006_length_189_cov_60.889610_g76065_i0forward_frame_2 - 0.15 12.2 0.0 0.15 12.2 0.0 1.0 1 0 0 1 1 1 0 C-terminal carbohydrate-binding module Ribosomal_S6e PF01092.19 NODE_84004_length_189_cov_71.376623_g76063_i0reverse_frame_3 - 0.077 13.0 0.8 0.081 12.9 0.8 1.1 1 0 0 1 1 1 0 Ribosomal protein S6e Engrail_1_C_sig PF10525.9 NODE_84002_length_189_cov_74.974026_g76061_i0reverse_frame_2 - 0.15 11.3 0.3 0.28 10.4 0.3 1.4 1 0 0 1 1 1 0 Engrailed homeobox C-terminal signature domain LPAM_1 PF08139.12 NODE_84000_length_189_cov_81.279221_g76059_i0reverse_frame_2 - 0.45 11.1 3.0 0.67 10.6 3.0 1.3 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Auto_anti-p27 PF06677.12 NODE_83997_length_189_cov_83.889610_g76056_i0reverse_frame_3 - 0.085 13.0 2.0 0.13 12.4 2.0 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Fanconi_A PF03511.14 NODE_83989_length_189_cov_148.474026_g76048_i0forward_frame_3 - 0.079 12.9 0.6 0.096 12.6 0.6 1.3 1 1 0 1 1 1 0 Fanconi anaemia group A protein SNAPc_SNAP43 PF09808.9 NODE_83979_length_189_cov_1092.071429_g76038_i0forward_frame_3 - 0.67 9.9 4.8 0.7 9.8 4.8 1.1 1 0 0 1 1 1 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 GP41 PF00517.17 NODE_83979_length_189_cov_1092.071429_g76038_i0forward_frame_2 - 0.16 11.8 0.7 0.19 11.6 0.7 1.0 1 0 0 1 1 1 0 Retroviral envelope protein RE_MamI PF09567.10 NODE_83976_length_189_cov_124922.857143_g76035_i0reverse_frame_2 - 0.041 13.5 1.1 0.042 13.5 1.1 1.1 1 0 0 1 1 1 0 MamI restriction endonuclease DUF3120 PF11318.8 ORF99987 - 0.0063 16.9 0.2 0.0063 16.9 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3120) Trefoil PF00088.18 ORF99365 - 0.083 12.8 1.8 0.23 11.4 1.8 1.7 1 1 0 1 1 1 0 Trefoil (P-type) domain PDZ_assoc PF10600.9 ORF99250 - 0.17 12.7 0.1 0.31 11.9 0.1 1.4 1 0 0 1 1 1 0 PDZ-associated domain of NMDA receptors Ig_J_chain PF15097.6 ORF987 - 0.078 12.9 0.0 0.087 12.7 0.0 1.0 1 0 0 1 1 1 0 Immunoglobulin J chain DUF2025 PF09634.10 ORF9799 - 0.18 11.8 0.1 0.27 11.3 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2025) Longin PF13774.6 ORF97833 - 0.053 13.6 0.2 0.064 13.3 0.2 1.2 1 0 0 1 1 1 0 Regulated-SNARE-like domain Tis11B_N PF04553.12 ORF97449 - 0.14 12.7 2.4 0.16 12.5 2.4 1.1 1 0 0 1 1 1 0 Tis11B like protein, N terminus MAGI_u1 PF16663.5 ORF97449 - 5.5 7.1 8.4 16 5.6 1.9 2.2 1 1 1 2 2 2 0 Unstructured region on MAGI Phenol_monoox PF04663.12 ORF96980 - 0.083 13.0 0.0 0.09 12.9 0.0 1.3 1 0 0 1 1 1 0 Phenol hydroxylase conserved region MerR_1 PF13411.6 ORF96294 - 0.041 14.0 0.1 0.052 13.7 0.1 1.1 1 0 0 1 1 1 0 MerR HTH family regulatory protein Polyketide_cyc2 PF10604.9 ORF95758 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport ERGIC_N PF13850.6 ORF95490 - 0.045 14.1 0.2 0.052 13.9 0.2 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) HTH_Tnp_1 PF01527.20 ORF95177 - 0.059 13.7 0.4 0.78 10.1 0.4 2.1 1 1 0 1 1 1 0 Transposase Transketolase_N PF00456.21 ORF95141 - 0.087 11.8 0.0 0.087 11.8 0.0 1.0 1 0 0 1 1 1 0 Transketolase, thiamine diphosphate binding domain zf-RING_11 PF17123.5 ORF94823 - 1.7e-05 24.4 0.4 1.7e-05 24.4 0.4 1.6 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF94823 - 0.0035 17.6 0.5 0.0035 17.6 0.5 1.7 2 0 0 2 2 2 1 Ring finger domain Synthase_beta PF11421.8 ORF94680 - 0.28 11.9 7.5 0.088 13.5 4.0 2.0 1 1 1 2 2 2 0 ATP synthase F1 beta subunit RHH_3 PF12651.7 ORF94676 - 0.0011 18.9 0.1 0.0015 18.4 0.1 1.2 1 0 0 1 1 1 1 Ribbon-helix-helix domain Syntaxin_2 PF14523.6 ORF94676 - 0.027 14.8 0.4 0.031 14.6 0.4 1.1 1 0 0 1 1 1 0 Syntaxin-like protein OrfB_IS605 PF01385.19 ORF94676 - 0.11 12.7 2.3 0.12 12.7 2.3 1.0 1 0 0 1 1 1 0 Probable transposase DUF3463 PF11946.8 ORF94676 - 0.13 12.1 0.5 0.13 12.1 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) L27_2 PF09045.10 ORF9448 - 0.0039 17.1 0.2 0.0048 16.8 0.2 1.2 1 0 0 1 1 1 1 L27_2 DUF1289 PF06945.13 ORF94391 - 0.051 13.4 7.2 0.11 12.3 7.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1289) HCV_env PF01539.17 ORF94391 - 0.14 11.8 0.2 0.16 11.7 0.2 1.0 1 0 0 1 1 1 0 Hepatitis C virus envelope glycoprotein E1 DUF2935 PF11155.8 ORF94326 - 0.021 15.1 0.2 0.023 15.0 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) Mt_ATP-synt_D PF05873.12 ORF94326 - 0.066 13.1 0.3 0.067 13.0 0.3 1.2 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) Cdc6_C PF09079.11 ORF93684 - 0.096 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain NUMOD1 PF07453.13 ORF93159 - 0.13 12.6 0.1 1.3 9.4 0.0 2.1 2 0 0 2 2 2 0 NUMOD1 domain DUF3884 PF13024.6 ORF92451 - 0.17 11.4 0.9 0.2 11.2 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) SRA1 PF07304.11 ORF92368 - 0.018 14.8 0.0 0.018 14.8 0.0 1.1 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) Aldedh PF00171.22 ORF9205 - 1.1e-23 83.5 0.1 1.2e-23 83.4 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ICMT PF04140.14 ORF91947 - 0.11 12.9 9.0 0.12 12.9 8.7 1.3 1 1 0 1 1 1 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family YARHG PF13308.6 ORF91937 - 0.11 12.4 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 YARHG domain DUF3332 PF11810.8 ORF91765 - 0.53 9.9 4.1 0.61 9.7 4.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DUF2892 PF11127.8 ORF9171 - 0.075 13.1 0.1 0.09 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) Claudin_3 PF06653.11 ORF9171 - 0.17 11.8 0.0 0.17 11.8 0.0 1.0 1 0 0 1 1 1 0 Tight junction protein, Claudin-like ADH_zinc_N_2 PF13602.6 ORF91425 - 0.0041 18.2 0.1 0.0044 18.1 0.1 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase G2F PF07474.12 ORF91425 - 0.062 13.1 0.0 0.065 13.0 0.0 1.1 1 0 0 1 1 1 0 G2F domain Mito_carr PF00153.27 ORF91334 - 1.2e-07 31.5 0.0 1.3e-07 31.4 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein Vac7 PF12751.7 ORF91296 - 0.19 11.2 0.1 0.19 11.2 0.1 1.0 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 DUF1496 PF07383.12 ORF90922 - 0.018 14.6 0.0 0.035 13.7 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1496) DUF5118 PF17162.4 ORF90678 - 0.056 13.3 0.6 0.11 12.4 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5118) Pax7 PF12360.8 ORF90455 - 0.066 13.4 0.4 0.095 12.9 0.4 1.2 1 0 0 1 1 1 0 Paired box protein 7 DAGAT PF03982.13 ORF90329 - 2.4e-08 33.3 0.0 2.6e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 Diacylglycerol acyltransferase DASH_Dam1 PF08653.10 ORF90299 - 0.075 12.9 3.0 0.1 12.4 3.0 1.4 1 1 0 1 1 1 0 DASH complex subunit Dam1 Phage_holin_3_3 PF16083.5 ORF90123 - 0.0084 16.2 0.0 0.0097 16.0 0.0 1.1 1 0 0 1 1 1 1 LydA holin phage, holin superfamily III Bowman-Birk_leg PF00228.20 ORF89301 - 0.13 12.7 1.9 5.3 7.5 0.1 2.2 2 0 0 2 2 2 0 Bowman-Birk serine protease inhibitor family DUF585 PF04522.12 ORF88714 - 0.1 12.2 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF585) MFS_2 PF13347.6 ORF87602 - 0.0034 16.0 0.2 0.0034 16.0 0.2 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Claudin_3 PF06653.11 ORF87602 - 0.044 13.7 0.4 0.044 13.7 0.4 1.3 1 1 0 1 1 1 0 Tight junction protein, Claudin-like Phg_2220_C PF09524.10 ORF87433 - 0.032 14.3 0.1 0.063 13.4 0.1 1.5 1 1 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) TPK_B1_binding PF04265.14 ORF8677 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain PKHD_C PF18331.1 ORF86731 - 0.051 13.6 0.3 2.4 8.3 0.0 2.1 1 1 1 2 2 2 0 PKHD-type hydroxylase C-terminal domain DUF3678 PF12435.8 ORF86310 - 1.6 8.2 7.9 3.2 7.2 0.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) T4-Gluco-transf PF09198.10 ORF85853 - 0.017 14.7 1.0 0.023 14.3 0.9 1.3 1 1 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase ACT PF01842.25 ORF85853 - 0.073 12.9 0.1 0.11 12.3 0.1 1.4 1 1 0 1 1 1 0 ACT domain Pox_A3L PF05288.11 ORF85853 - 0.12 12.4 0.7 0.37 10.8 0.3 1.7 1 1 0 1 1 1 0 Poxvirus A3L Protein GT-D PF08759.11 ORF85630 - 0.035 13.8 0.1 0.036 13.7 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase GT-D fold DUF1802 PF08819.11 ORF85392 - 0.08 12.8 0.1 0.08 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1802) YARHG PF13308.6 ORF85016 - 0.11 12.4 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 YARHG domain DUF3524 PF12038.8 ORF84849 - 0.14 11.9 0.0 0.16 11.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) DUF4805 PF16063.5 ORF84430 - 0.031 13.6 0.6 0.035 13.4 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4805) ACTL7A_N PF16840.5 ORF84021 - 0.095 12.8 0.1 8 6.6 0.1 2.1 1 1 1 2 2 2 0 Actin-like protein 7A N-terminus PMAIP1 PF15150.6 ORF8401 - 0.047 13.5 0.1 0.078 12.9 0.1 1.4 1 0 0 1 1 1 0 Phorbol-12-myristate-13-acetate-induced HN PF00423.19 ORF83930 - 0.085 11.6 0.5 0.08 11.7 0.5 1.0 1 0 0 1 1 1 0 Haemagglutinin-neuraminidase FOXP-CC PF16159.5 ORF83839 - 0.049 14.3 0.1 0.053 14.2 0.1 1.1 1 0 0 1 1 1 0 FOXP coiled-coil domain US2 PF02476.15 ORF83832 - 0.016 15.9 0.0 0.023 15.4 0.0 1.3 1 0 0 1 1 1 0 US2 family PI-PLC-X PF00388.19 ORF83575 - 0.033 13.8 0.0 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-specific phospholipase C, X domain DUF5340 PF17275.2 ORF8335 - 0.12 12.5 0.2 0.18 12.0 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5340) Pkinase PF00069.25 ORF82976 - 0.046 13.1 0.0 0.048 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein kinase domain DUF2845 PF11006.8 ORF82876 - 0.057 13.5 0.6 2.3 8.4 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2845) LRR_10 PF18805.1 ORF82651 - 0.15 11.8 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Leucine-rich repeat CTNNBL PF08216.11 ORF82445 - 0.00039 20.6 1.0 0.00048 20.2 0.5 1.4 1 1 0 1 1 1 1 Catenin-beta-like, Arm-motif containing nuclear DUF2164 PF09932.9 ORF82287 - 0.056 13.5 0.1 0.072 13.2 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) DUF3793 PF12672.7 ORF82058 - 0.042 13.9 0.3 0.044 13.8 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3793) Plexin_cytopl PF08337.12 ORF81890 - 0.023 13.4 0.1 0.023 13.4 0.1 1.1 1 0 0 1 1 1 0 Plexin cytoplasmic RasGAP domain zf-C2HC PF01530.18 ORF81640 - 0.16 12.2 2.1 0.38 11.0 0.2 2.1 2 0 0 2 2 2 0 Zinc finger, C2HC type TPK_B1_binding PF04265.14 ORF8150 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain BatD PF13584.6 ORF81263 - 0.066 12.0 0.0 0.066 12.0 0.0 1.0 1 0 0 1 1 1 0 Oxygen tolerance PGG PF13962.6 ORF81261 - 1.5 8.7 6.7 1.4 8.7 6.7 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF3144 PF11342.8 ORF81150 - 0.066 13.5 1.2 0.1 12.9 1.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3144) Herpes_UL3 PF03369.13 ORF81068 - 0.075 13.6 0.0 0.081 13.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL3 protein DUF5589 PF17672.1 ORF80615 - 0.21 11.5 1.6 0.22 11.5 1.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5589) Ni_hydr_CYTB PF01292.20 ORF80189 - 0.055 13.1 0.0 0.055 13.1 0.0 1.0 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 TPKR_C2 PF16920.5 ORF80100 - 0.031 14.4 3.2 1.1 9.5 0.1 2.1 1 1 1 2 2 2 0 Tyrosine-protein kinase receptor C2 Ig-like domain CRAM_rpt PF07016.11 ORF80022 - 0.081 12.7 1.0 0.13 12.1 1.0 1.4 1 0 0 1 1 1 0 Cysteine-rich acidic integral membrane protein precursor DUF4917 PF16263.5 ORF79634 - 0.012 14.9 0.0 0.013 14.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4917) DUF1263 PF06882.12 ORF7956 - 0.014 15.4 0.1 0.017 15.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1263) RNase_T PF00929.24 ORF7947 - 3.5e-08 34.2 0.0 3.8e-08 34.0 0.0 1.0 1 0 0 1 1 1 1 Exonuclease M16C_assoc PF08367.11 ORF7947 - 0.12 11.4 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 Peptidase M16C associated DUF2013 PF09431.10 ORF79339 - 0.079 13.1 0.3 0.094 12.9 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2013) DUF3667 PF12412.8 ORF78496 - 0.079 12.5 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) LRR_2 PF07723.13 ORF77938 - 0.34 11.7 5.7 2.3 9.0 0.2 2.7 3 0 0 3 3 3 0 Leucine Rich Repeat VEGF_C PF14554.6 ORF77527 - 0.015 15.4 0.9 0.088 12.9 1.1 1.9 1 1 1 2 2 2 0 VEGF heparin-binding domain MFS_1 PF07690.16 ORF77396 - 0.0077 15.2 0.1 0.0077 15.2 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily CBP_BcsR PF10945.8 ORF76310 - 2.4e-22 78.1 0.9 3e-22 77.8 0.9 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsR CBP_BcsO PF17037.5 ORF76310 - 0.0044 17.2 0.1 0.0051 17.0 0.1 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsO HAGH_C PF16123.5 ORF76262 - 3.7e-08 33.8 0.0 3.9e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus HOK_GEF PF01848.16 ORF76173 - 6.7e-17 60.6 1.5 8.1e-17 60.4 1.5 1.1 1 0 0 1 1 1 1 Hok/gef family Sugar_tr PF00083.24 ORF7612 - 0.0031 16.5 1.7 0.0031 16.5 1.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2013 PF09431.10 ORF7579 - 0.079 13.1 0.3 0.094 12.9 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2013) BssS PF13991.6 ORF75503 - 0.089 12.9 1.4 1.4 9.1 0.0 2.6 2 1 1 3 3 3 0 BssS protein family RRS1 PF04939.12 ORF7541 - 0.093 12.6 0.0 0.099 12.5 0.0 1.1 1 0 0 1 1 1 0 Ribosome biogenesis regulatory protein (RRS1) UNC119_bdg PF15435.6 ORF7541 - 0.1 12.1 0.4 0.11 12.0 0.4 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue Alginate_lyase2 PF08787.11 ORF75342 - 0.017 15.0 0.5 0.018 14.9 0.5 1.0 1 0 0 1 1 1 0 Alginate lyase DUF4497 PF14924.6 ORF75276 - 0.043 14.3 0.0 0.051 14.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4497) MatE PF01554.18 ORF7507 - 0.0022 17.7 0.1 0.0025 17.5 0.1 1.1 1 0 0 1 1 1 1 MatE PFK PF00365.20 ORF74471 - 2.8e-07 30.1 0.0 3e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 Phosphofructokinase NPCC PF08058.11 ORF73498 - 0.17 11.9 0.8 0.18 11.9 0.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component MyTH4 PF00784.17 ORF73406 - 0.14 12.7 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 MyTH4 domain Vps54 PF07928.12 ORF73026 - 0.052 14.0 0.0 0.064 13.7 0.0 1.1 1 0 0 1 1 1 0 Vps54-like protein Mito_carr PF00153.27 ORF72362 - 4.7e-09 36.1 0.0 5.2e-09 35.9 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein CENP-M PF11111.8 ORF72136 - 0.061 12.5 0.1 0.074 12.2 0.1 1.1 1 0 0 1 1 1 0 Centromere protein M (CENP-M) Kelch_6 PF13964.6 ORF72130 - 0.00066 19.9 0.0 0.00084 19.5 0.0 1.1 1 0 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 ORF72130 - 0.0014 18.6 0.0 0.0019 18.1 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Spermine_synth PF01564.17 ORF72130 - 0.0016 17.9 0.0 0.0019 17.7 0.0 1.1 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Kelch_4 PF13418.6 ORF72130 - 0.013 15.5 0.0 0.02 14.9 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF72130 - 0.022 14.3 0.0 0.032 13.8 0.0 1.5 1 1 0 1 1 1 0 Kelch motif Kelch_3 PF13415.6 ORF72130 - 0.12 12.7 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain DUF1571 PF07608.11 ORF72069 - 0.18 11.2 0.0 0.2 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1571) CCSMST1 PF15013.6 ORF71384 - 0.21 11.8 2.2 0.25 11.5 2.0 1.3 1 1 0 1 1 1 0 CCSMST1 family HTH_18 PF12833.7 ORF70534 - 4e-15 55.8 0.1 4.4e-15 55.7 0.1 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF70534 - 8.2e-12 44.9 0.0 1.1e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family RNA_pol_L_2 PF13656.6 ORF7037 - 0.0025 17.6 0.3 0.0031 17.2 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L_2 PF13656.6 ORF70333 - 0.0025 17.6 0.3 0.0031 17.2 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Pkinase PF00069.25 ORF70064 - 1e-08 34.9 0.1 1.1e-08 34.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70064 - 0.00018 20.9 0.1 0.00018 20.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4174 PF13778.6 ORF70064 - 0.085 13.3 0.2 0.095 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4174) Ank_5 PF13857.6 ORF70025 - 4.5e-14 52.3 0.5 7.7e-08 32.5 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF70025 - 9.5e-12 45.4 0.1 1.2e-11 45.1 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF70025 - 4e-10 39.0 0.0 0.0001 22.4 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 ORF70025 - 4.8e-10 39.4 0.1 3.2e-05 24.2 0.0 2.0 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF70025 - 1.2e-07 32.1 0.0 1.4e-07 31.9 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) YlzJ PF14035.6 ORF70025 - 0.19 12.0 0.0 2.8 8.2 0.0 2.0 1 1 1 2 2 2 0 YlzJ-like protein Peptidase_C2 PF00648.21 ORF70004 - 3e-07 29.8 0.0 3.1e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease DUF1639 PF07797.14 ORF69572 - 0.095 12.7 0.3 0.12 12.4 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) Adipogenin PF15202.6 ORF69114 - 0.00029 20.8 0.1 0.00032 20.7 0.1 1.1 1 0 0 1 1 1 1 Adipogenin Nipped-B_C PF12830.7 ORF68922 - 0.087 12.8 0.0 0.093 12.7 0.0 1.0 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus DUF2258 PF10015.9 ORF68922 - 0.1 12.7 0.5 0.13 12.4 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2258) Hum_adeno_E3A PF05393.11 ORF68725 - 9.7 6.2 9.5 5.4 7.0 7.1 1.8 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein DUF5130 PF17174.4 ORF68477 - 0.049 13.8 0.0 0.051 13.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5130) Adeno_E1A PF02703.14 ORF68174 - 0.23 11.0 0.2 0.26 10.8 0.2 1.0 1 0 0 1 1 1 0 Early E1A protein DUF2013 PF09431.10 ORF68076 - 0.079 13.1 0.3 0.094 12.9 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2013) BK_channel_a PF03493.18 ORF68034 - 0.05 13.8 0.2 0.05 13.8 0.2 1.1 1 0 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit RNA_pol_L_2 PF13656.6 ORF67986 - 0.0025 17.6 0.3 0.0031 17.2 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain BACK PF07707.15 ORF67589 - 4.7e-05 23.4 0.2 5.1e-05 23.3 0.2 1.1 1 0 0 1 1 1 1 BTB And C-terminal Kelch Ribosomal_S17 PF00366.20 ORF67589 - 0.059 13.5 0.0 0.062 13.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S17 DUF4723 PF15851.5 ORF67027 - 0.13 12.4 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4723) FHA PF00498.26 ORF66975 - 5.9e-06 26.5 0.1 8.8e-06 26.0 0.1 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF66975 - 0.00014 22.1 0.1 0.00017 21.9 0.1 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain CBM_26 PF16824.5 ORF66975 - 0.13 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 C-terminal carbohydrate-binding module Tmemb_cc2 PF10267.9 ORF66376 - 0.17 11.0 3.7 0.19 10.9 3.7 1.0 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein She9_MDM33 PF05546.11 ORF66327 - 0.018 14.9 0.2 0.02 14.7 0.2 1.0 1 0 0 1 1 1 0 She9 / Mdm33 family TPK_B1_binding PF04265.14 ORF66227 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain PAP2 PF01569.21 ORF65640 - 0.054 13.3 0.1 0.057 13.2 0.1 1.0 1 0 0 1 1 1 0 PAP2 superfamily Sterol-sensing PF12349.8 ORF6541 - 0.052 13.4 0.1 0.053 13.4 0.1 1.0 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation DUF3793 PF12672.7 ORF64888 - 0.042 13.9 0.3 0.044 13.8 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3793) DUF2239 PF09998.9 ORF64786 - 0.017 14.9 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) Dexa_ind PF15198.6 ORF6476 - 0.014 15.5 2.6 0.015 15.4 2.6 1.2 1 0 0 1 1 1 0 Dexamethasone-induced TMIE PF16038.5 ORF6476 - 0.64 9.9 3.0 1.1 9.2 3.0 1.3 1 0 0 1 1 1 0 TMIE protein SecIII_SopE_N PF05364.14 ORF64551 - 0.025 14.6 0.1 0.028 14.5 0.1 1.1 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus TCR_zetazeta PF11628.8 ORF64271 - 0.11 12.2 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 T-cell surface glycoprotein CD3 zeta chain SAM35 PF10806.8 ORF63734 - 0.07 13.4 0.1 0.072 13.3 0.1 1.1 1 0 0 1 1 1 0 SAM35, subunit of SAM coomplex RdRP PF05183.12 ORF63612 - 0.06 12.0 0.1 0.067 11.8 0.1 1.0 1 0 0 1 1 1 0 RNA dependent RNA polymerase Sgf11 PF08209.11 ORF63491 - 0.073 12.6 0.3 0.12 12.0 0.3 1.3 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) Radical_SAM_C PF16199.5 ORF6334 - 0.00028 20.9 0.0 0.00031 20.7 0.0 1.1 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Paramyxo_P_V_N PF13825.6 ORF63160 - 0.043 13.2 0.0 0.052 13.0 0.0 1.0 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus Cofilin_ADF PF00241.20 ORF62772 - 0.039 13.7 0.0 0.042 13.7 0.0 1.0 1 0 0 1 1 1 0 Cofilin/tropomyosin-type actin-binding protein 4HB_MCP_1 PF12729.7 ORF62624 - 0.065 12.8 1.3 0.087 12.4 1.3 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction BDHCT_assoc PF16204.5 ORF62429 - 0.032 13.9 3.2 0.03 14.0 3.2 1.1 1 0 0 1 1 1 0 BDHCT-box associated domain on Bloom syndrome protein Osteopontin PF00865.18 ORF62429 - 0.088 12.3 2.6 0.096 12.2 2.6 1.0 1 0 0 1 1 1 0 Osteopontin BAP PF06639.11 ORF62301 - 0.047 14.0 0.3 0.073 13.4 0.1 1.5 1 1 1 2 2 2 0 Basal layer antifungal peptide (BAP) Myticin-prepro PF10690.9 ORF61873 - 0.13 12.6 2.8 0.15 12.4 2.8 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel TetR_C_30 PF17939.1 ORF61772 - 0.046 13.9 0.0 0.054 13.7 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CC PF04942.14 ORF61725 - 0.059 13.6 0.5 0.074 13.3 0.5 1.2 1 0 0 1 1 1 0 CC domain Hydrolase_like PF13242.6 ORF61626 - 6.6e-15 54.9 0.0 7.1e-15 54.8 0.0 1.0 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 ORF61626 - 0.0016 18.5 0.0 0.0019 18.3 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 ORF61626 - 0.11 12.1 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase DrrA_P4M PF14860.6 ORF61626 - 0.23 11.3 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain Mito_carr PF00153.27 ORF60369 - 1.3e-07 31.4 0.0 1.3e-07 31.4 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein Acetyltransf_6 PF13480.7 ORF60369 - 0.12 12.5 0.1 0.13 12.4 0.1 1.0 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PPL5 PF18168.1 ORF60337 - 0.038 13.3 0.0 0.046 13.0 0.0 1.1 1 0 0 1 1 1 0 Prim-pol family 5 zf-HYPF PF07503.12 ORF60337 - 3.6 7.4 8.6 3.2 7.6 0.5 3.0 3 0 0 3 3 3 0 HypF finger HAP2-GCS1 PF10699.9 ORF59664 - 0.099 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Male gamete fusion factor TT_ORF1 PF02956.14 ORF59664 - 5.7 5.5 8.9 5.1 5.6 8.9 1.0 1 0 0 1 1 1 0 TT viral orf 1 Flavoprotein PF02441.19 ORF58703 - 0.00062 19.6 0.0 0.00071 19.4 0.0 1.0 1 0 0 1 1 1 1 Flavoprotein Tubulin PF00091.25 ORF58526 - 3.4e-09 37.2 0.3 3.6e-09 37.1 0.3 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 ORF58526 - 0.0035 17.6 0.9 0.0047 17.2 0.9 1.4 1 1 0 1 1 1 1 Misato Segment II tubulin-like domain DUF3087 PF11286.8 ORF58443 - 0.013 15.0 0.5 0.014 14.9 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) Cofilin_ADF PF00241.20 ORF57970 - 0.039 13.7 0.0 0.042 13.7 0.0 1.0 1 0 0 1 1 1 0 Cofilin/tropomyosin-type actin-binding protein TPK_B1_binding PF04265.14 ORF57823 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain SPT_ssu-like PF11779.8 ORF57381 - 0.028 14.1 2.0 0.038 13.6 2.0 1.4 1 1 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like Pox_Rif PF03340.13 ORF57308 - 0.042 12.3 0.1 0.043 12.3 0.1 1.0 1 0 0 1 1 1 0 Poxvirus rifampicin resistance protein PAN_2 PF08276.11 ORF56974 - 0.013 15.6 0.4 0.016 15.3 0.4 1.2 1 0 0 1 1 1 0 PAN-like domain DUF4064 PF13273.6 ORF56839 - 0.041 14.1 0.0 0.047 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) Oleosin PF01277.17 ORF56677 - 0.084 12.6 0.0 0.093 12.5 0.0 1.1 1 0 0 1 1 1 0 Oleosin AAA_9 PF12781.7 ORF56108 - 3e-08 33.1 0.1 9.1e-07 28.2 0.0 2.0 2 0 0 2 2 2 2 ATP-binding dynein motor region DNA_RNApol_7kD PF03604.13 ORF55567 - 0.0027 17.4 2.0 0.014 15.0 0.8 2.2 2 0 0 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit zf-C3HC4 PF00097.25 ORF55567 - 0.005 16.7 1.8 0.011 15.6 1.8 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) TF_Zn_Ribbon PF08271.12 ORF55567 - 0.013 15.0 0.7 0.094 12.3 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding DZR PF12773.7 ORF55567 - 0.03 14.3 3.6 0.056 13.5 3.6 1.4 1 1 0 1 1 1 0 Double zinc ribbon Zn_ribbon_SprT PF17283.2 ORF55567 - 2.7 8.0 8.1 0.78 9.7 0.3 2.7 2 1 1 3 3 3 0 SprT-like zinc ribbon domain TAP_C PF03943.13 ORF55553 - 0.042 13.5 0.1 0.052 13.2 0.1 1.2 1 0 0 1 1 1 0 TAP C-terminal domain DUF2633 PF11119.8 ORF55289 - 1.3 9.0 2.8 2.3 8.2 2.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2633) Herpes_UL3 PF03369.13 ORF54559 - 0.075 13.6 0.0 0.081 13.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL3 protein DUF2635 PF10948.8 ORF54268 - 0.071 12.8 0.1 0.54 10.0 0.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2635) Mito_carr PF00153.27 ORF54076 - 4e-05 23.4 0.0 4e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein STALD PF18185.1 ORF54076 - 0.054 12.8 0.0 0.055 12.8 0.0 1.0 1 0 0 1 1 1 0 Sir2- and TIR-associating SLOG family BESS PF02944.20 ORF54055 - 0.068 13.0 1.4 0.15 11.9 1.4 1.6 1 0 0 1 1 1 0 BESS motif DUF2635 PF10948.8 ORF53854 - 0.071 12.8 0.1 0.54 10.0 0.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2635) DUF4118 PF13493.6 ORF53719 - 0.036 13.8 1.0 0.043 13.6 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) FAM193_C PF15914.5 ORF53110 - 0.036 13.8 0.1 0.045 13.5 0.1 1.1 1 0 0 1 1 1 0 FAM193 family C-terminal RsgA_N PF16745.5 ORF52726 - 0.14 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 RsgA N-terminal domain YdiH PF15930.5 ORF52454 - 1.8e-43 146.5 0.7 2e-43 146.4 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function LRR_8 PF13855.6 ORF52354 - 0.0019 17.9 1.3 0.011 15.4 1.3 1.9 1 1 0 1 1 1 1 Leucine rich repeat LRR_1 PF00560.33 ORF52354 - 0.0045 17.3 1.3 0.017 15.6 0.4 2.1 2 0 0 2 2 2 1 Leucine Rich Repeat LRR_6 PF13516.6 ORF52354 - 0.11 12.6 0.8 0.19 11.9 0.2 1.8 2 0 0 2 2 2 0 Leucine Rich repeat Med25 PF11232.8 ORF5203 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF5203 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein GIT1_C PF12205.8 ORF51405 - 0.034 14.3 0.0 0.034 14.3 0.0 1.0 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term Arf PF00025.21 ORF51278 - 6.3e-09 35.5 0.0 6.8e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family UPF0565 PF10561.9 ORF50917 - 0.051 12.8 0.1 0.052 12.8 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 2Fe-2S_Ferredox PF11591.8 ORF50727 - 3.8 7.5 7.2 1.6 8.6 2.5 2.2 2 0 0 2 2 2 0 Ferredoxin chloroplastic transit peptide BssS PF13991.6 ORF50615 - 0.089 12.9 1.4 1.4 9.1 0.0 2.6 2 1 1 3 3 3 0 BssS protein family HAP2-GCS1 PF10699.9 ORF50515 - 0.099 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Male gamete fusion factor TT_ORF1 PF02956.14 ORF50515 - 5.7 5.5 8.9 5.1 5.6 8.9 1.0 1 0 0 1 1 1 0 TT viral orf 1 DUF4130 PF13566.6 ORF50416 - 0.058 13.4 0.0 0.066 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4130 Peptidase_M61_N PF17899.1 ORF5038 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Peptidase M61 N-terminal domain MAGE_N PF12440.8 ORF50278 - 0.53 11.0 5.0 0.56 10.9 5.0 1.1 1 0 0 1 1 1 0 Melanoma associated antigen family N terminal Beta-TrCP_D PF12125.8 ORF49433 - 0.2 11.6 1.4 0.47 10.4 1.4 1.6 1 0 0 1 1 1 0 D domain of beta-TrCP CCDC32 PF14989.6 ORF48835 - 0.013 15.5 0.1 0.015 15.3 0.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing 32 hNIFK_binding PF12196.8 ORF48746 - 0.2 11.2 0.7 0.37 10.3 0.7 1.5 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK p47_phox_C PF08944.11 ORF47884 - 0.48 9.9 3.7 1.2 8.7 0.2 2.1 2 0 0 2 2 2 0 NADPH oxidase subunit p47Phox, C terminal domain B9-C2 PF07162.11 ORF47402 - 3.3e-05 24.2 0.0 3.5e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein CUT PF02376.15 ORF47219 - 0.041 14.1 0.6 0.046 13.9 0.6 1.1 1 0 0 1 1 1 0 CUT domain Ebp2 PF05890.12 ORF46616 - 2.9e-08 33.6 18.7 3.1e-08 33.5 18.7 1.0 1 0 0 1 1 1 1 Eukaryotic rRNA processing protein EBP2 Sec23_BS PF08033.12 ORF46541 - 5.6e-09 36.6 0.1 5.7e-09 36.6 0.1 1.1 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain SpoIISB_antitox PF14185.6 ORF46521 - 0.97 9.4 6.3 1.5 8.8 4.8 2.1 1 1 0 1 1 1 0 Antitoxin SpoIISB, type II toxin-antitoxin system DUF1072 PF06380.11 ORF46324 - 1.1 9.1 9.5 0.26 11.2 2.6 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1072) NPCC PF08058.11 ORF46267 - 0.17 11.9 0.8 0.18 11.9 0.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component Sugar_tr PF00083.24 ORF45762 - 0.00049 19.1 1.1 0.00053 19.0 1.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter FeoB_C PF07664.12 ORF45762 - 0.079 12.7 0.5 0.18 11.5 0.0 1.7 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus AAA_lid_4 PF17864.1 ORF45505 - 0.00095 18.9 0.2 0.00095 18.9 0.2 1.2 1 0 0 1 1 1 1 RuvB AAA lid domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks408.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks408.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks408.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks408.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HTH_7 PF02796.15 ORF45355 - 0.028 14.5 0.4 0.04 14.0 0.4 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DrsE_2 PF13686.6 ORF45289 - 0.16 11.8 0.8 0.18 11.7 0.8 1.0 1 0 0 1 1 1 0 DsrE/DsrF/DrsH-like family TPK_B1_binding PF04265.14 ORF44837 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Med3 PF11593.8 ORF44797 - 0.063 12.5 6.7 0.066 12.4 6.7 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Ribosomal_S19 PF00203.21 ORF44732 - 4.7e-23 80.9 2.2 5.6e-23 80.6 2.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S19 LRR_4 PF12799.7 ORF44639 - 0.001 19.4 0.0 0.015 15.7 0.1 2.0 1 1 1 2 2 2 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF44639 - 0.067 13.0 0.0 1.1 9.0 0.0 2.1 2 0 0 2 2 2 0 Leucine rich repeat MNE1 PF13762.6 ORF44322 - 3.5 7.6 8.7 8.9 6.3 8.7 1.6 1 1 0 1 1 1 0 Mitochondrial splicing apparatus component Intg_mem_TP0381 PF09529.10 ORF44137 - 0.0069 15.9 0.5 0.0075 15.8 0.5 1.1 1 0 0 1 1 1 1 Integral membrane protein (intg_mem_TP0381) HEAT_2 PF13646.6 ORF43724 - 2.2e-06 28.0 0.6 2.3e-06 27.9 0.6 1.0 1 0 0 1 1 1 1 HEAT repeats HEAT_PBS PF03130.16 ORF43724 - 6.9e-05 23.2 1.1 0.0001 22.7 0.1 1.8 2 1 0 2 2 2 1 PBS lyase HEAT-like repeat HEAT PF02985.22 ORF43724 - 0.072 13.4 0.2 12 6.4 0.0 2.2 2 0 0 2 2 2 0 HEAT repeat DUF2976 PF11190.8 ORF43682 - 0.14 11.9 0.3 0.29 11.0 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2976) Thioredoxin PF00085.20 ORF43259 - 5.8e-05 23.0 0.0 6.8e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF43259 - 0.082 13.4 0.0 0.085 13.3 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain TPK_B1_binding PF04265.14 ORF42996 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain DUF1509 PF07420.11 ORF42962 - 0.11 11.4 0.6 0.12 11.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Beta-TrCP_D PF12125.8 ORF42196 - 0.2 11.6 1.4 0.47 10.4 1.4 1.6 1 0 0 1 1 1 0 D domain of beta-TrCP DUF5367 PF17329.2 ORF41857 - 0.0068 16.5 1.5 0.0068 16.5 1.5 1.4 1 1 0 1 1 1 1 Family of unknown function (DUF5367) DUF2635 PF10948.8 ORF4179 - 0.071 12.8 0.1 0.54 10.0 0.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2635) CC PF04942.14 ORF4162 - 0.059 13.6 0.5 0.074 13.3 0.5 1.2 1 0 0 1 1 1 0 CC domain Med25 PF11232.8 ORF41406 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF41406 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein Actin PF00022.19 ORF41189 - 3.8e-16 58.7 0.0 4.1e-16 58.6 0.0 1.0 1 0 0 1 1 1 1 Actin DUF2777 PF10949.8 ORF4114 - 0.037 13.7 0.0 0.041 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) fn3_2 PF16893.5 ORF40849 - 0.099 12.8 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Fibronectin type III domain Parecho_VpG PF06344.11 ORF40749 - 0.067 13.8 0.9 0.067 13.8 0.9 2.7 3 0 0 3 3 3 0 Parechovirus Genome-linked protein HTH_Tnp_Tc5 PF03221.16 ORF40447 - 0.058 13.4 0.6 0.085 12.9 0.3 1.4 1 1 0 1 1 1 0 Tc5 transposase DNA-binding domain NAD_synthase PF02540.17 ORF39840 - 6.4e-17 61.5 0.1 6.7e-17 61.4 0.1 1.0 1 0 0 1 1 1 1 NAD synthase Kinesin PF00225.23 ORF39731 - 0.00016 20.7 0.1 0.00021 20.4 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain Pkinase PF00069.25 ORF39576 - 1e-08 34.9 0.1 1.1e-08 34.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39576 - 0.00018 20.9 0.1 0.00018 20.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4174 PF13778.6 ORF39576 - 0.085 13.3 0.2 0.095 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4174) CLTH PF10607.9 ORF39317 - 0.11 12.4 0.8 0.12 12.3 0.8 1.0 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain DUF4754 PF15946.5 ORF39076 - 0.16 12.3 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4754) DUF1178 PF06676.11 ORF38935 - 0.22 11.9 5.3 0.23 11.8 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) BMF PF15185.6 ORF38775 - 0.038 13.7 0.0 0.04 13.6 0.0 1.1 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis SMC_N PF02463.19 ORF38775 - 0.11 12.0 0.1 0.11 11.9 0.1 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Intg_mem_TP0381 PF09529.10 ORF38183 - 0.0069 15.9 0.5 0.0075 15.8 0.5 1.1 1 0 0 1 1 1 1 Integral membrane protein (intg_mem_TP0381) Med25 PF11232.8 ORF38045 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF38045 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein Med3 PF11593.8 ORF37369 - 0.063 12.5 6.7 0.066 12.4 6.7 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DinB PF05163.12 ORF37271 - 0.032 14.2 0.3 0.043 13.7 0.1 1.3 1 1 0 1 1 1 0 DinB family Med12-PQL PF12144.8 ORF37026 - 0.098 12.5 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic Mediator 12 catenin-binding domain DUF2633 PF11119.8 ORF36633 - 1.3 9.0 2.8 2.3 8.2 2.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2633) DUF1639 PF07797.14 ORF36420 - 0.095 12.7 0.3 0.12 12.4 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) Abhydrolase_9_N PF15420.6 ORF36155 - 0.065 13.2 0.2 0.07 13.1 0.2 1.0 1 0 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus DER1 PF04511.15 ORF36082 - 2.9e-08 33.9 0.1 3.2e-08 33.7 0.1 1.0 1 0 0 1 1 1 1 Der1-like family LRR_4 PF12799.7 ORF35250 - 4.7e-05 23.7 0.1 6.2e-05 23.3 0.1 1.3 1 0 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF35250 - 0.0031 17.2 0.1 0.0065 16.2 0.1 1.5 1 1 0 1 1 1 1 Leucine rich repeat DUF2931 PF11153.8 ORF35184 - 0.093 12.4 0.0 0.094 12.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) LPG_synthase_TM PF03706.13 ORF34616 - 0.0073 15.9 0.1 0.0083 15.7 0.1 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Tim29 PF10171.9 ORF34268 - 0.036 13.6 0.0 0.056 12.9 0.0 1.4 1 1 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 DUF3332 PF11810.8 ORF34196 - 0.53 9.9 4.1 0.61 9.7 4.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DUF1433 PF07252.11 ORF34053 - 0.0088 16.3 1.1 0.01 16.1 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1433) NADH_4Fe-4S PF10589.9 ORF33040 - 0.055 13.5 0.1 0.065 13.3 0.1 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DUF5339 PF17274.2 ORF33040 - 0.22 12.4 2.4 0.63 10.9 1.5 2.0 1 1 0 1 1 1 0 Family of unknown function (DUF5339) zf_Hakai PF18408.1 ORF32762 - 0.035 13.8 1.6 3.9 7.3 0.1 2.4 1 1 1 2 2 2 0 C2H2 Hakai zinc finger domain Phospho_p8 PF10195.9 ORF32339 - 0.22 12.1 0.6 0.29 11.7 0.6 1.2 1 0 0 1 1 1 0 DNA-binding nuclear phosphoprotein p8 Spec3 PF15795.5 ORF32308 - 1.3e-09 38.5 13.1 0.00012 22.6 3.4 2.0 1 1 1 2 2 2 2 Ectodermal ciliogenesis protein CBFD_NFYB_HMF PF00808.23 ORF31864 - 1.4e-06 28.5 1.9 1.6e-06 28.3 1.9 1.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF31864 - 0.0067 16.8 0.3 0.007 16.7 0.3 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CK_II_beta PF01214.18 ORF3153 - 3e-13 50.0 0.0 3.1e-13 50.0 0.0 1.0 1 0 0 1 1 1 1 Casein kinase II regulatory subunit Peptidase_U32_C PF16325.5 ORF31521 - 1.8e-08 34.5 0.0 2.1e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Peptidase family U32 C-terminal domain TPK_B1_binding PF04265.14 ORF31163 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain TIP39 PF14980.6 ORF31111 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 TIP39 peptide Kelch_6 PF13964.6 ORF30908 - 0.046 14.0 0.0 0.33 11.3 0.0 1.9 2 0 0 2 2 2 0 Kelch motif DPM3 PF08285.11 ORF29699 - 0.086 13.0 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) EF-hand_7 PF13499.6 ORF29252 - 4.1e-05 24.0 4.6 0.0047 17.3 0.4 1.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF29252 - 0.0019 18.0 0.3 0.0066 16.3 0.2 1.8 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF29252 - 0.002 17.5 0.3 0.006 16.1 0.2 1.8 2 0 0 2 2 2 1 EF hand Herpes_LMP2 PF07415.11 ORF288 - 0.14 10.9 3.6 0.14 10.9 3.6 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein Acyl-CoA_dh_1 PF00441.24 ORF27854 - 1.7e-06 28.3 0.1 1.8e-06 28.3 0.1 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Ca_hom_mod PF14798.6 ORF27793 - 0.0014 17.8 0.5 0.0014 17.8 0.5 1.0 1 0 0 1 1 1 1 Calcium homeostasis modulator BTB PF00651.31 ORF27789 - 6.7e-09 36.0 0.4 6.9e-09 35.9 0.4 1.0 1 0 0 1 1 1 1 BTB/POZ domain DUF1392 PF07154.11 ORF27455 - 0.061 13.4 0.3 0.072 13.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1392) Abhydrolase_3 PF07859.13 ORF26900 - 0.00069 19.5 0.0 0.00071 19.5 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Lipid_DES PF08557.10 ORF26900 - 0.092 12.3 0.3 0.21 11.1 0.2 1.7 1 1 1 2 2 2 0 Sphingolipid Delta4-desaturase (DES) Rtt106_N PF18215.1 ORF26820 - 0.016 14.9 0.0 0.019 14.7 0.0 1.1 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain 7TM_GPCR_Srab PF10292.9 ORF26794 - 0.031 13.2 6.4 0.035 13.0 6.4 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor Neprosin_AP PF14365.6 ORF2636 - 0.026 15.0 0.0 0.029 14.9 0.0 1.1 1 0 0 1 1 1 0 Neprosin activation peptide DUF4750 PF15938.5 ORF25677 - 0.075 12.7 1.9 0.087 12.5 1.2 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) MFS_1 PF07690.16 ORF25567 - 0.0031 16.5 0.2 0.0034 16.4 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily T4-Gluco-transf PF09198.10 ORF25520 - 0.017 14.7 1.0 0.023 14.3 0.9 1.3 1 1 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase ACT PF01842.25 ORF25520 - 0.073 12.9 0.1 0.11 12.3 0.1 1.4 1 1 0 1 1 1 0 ACT domain Pox_A3L PF05288.11 ORF25520 - 0.12 12.4 0.7 0.37 10.8 0.3 1.7 1 1 0 1 1 1 0 Poxvirus A3L Protein ENOD40 PF08247.11 ORF25325 - 1.6 8.9 8.5 4.7 7.4 1.1 2.6 2 1 0 2 2 2 0 ENOD40 protein Biopterin_H PF00351.21 ORF25156 - 2.4e-08 33.4 0.4 2.4e-08 33.4 0.4 1.0 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase UL45 PF05473.12 ORF25129 - 0.14 11.8 3.8 0.14 11.7 3.8 1.0 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like Profilin PF00235.19 ORF2502 - 0.18 12.0 0.0 0.22 11.8 0.0 1.0 1 0 0 1 1 1 0 Profilin Orf78 PF06024.12 ORF24734 - 0.15 12.4 1.6 0.17 12.2 1.6 1.1 1 0 0 1 1 1 0 Orf78 (ac78) TPK_B1_binding PF04265.14 ORF24481 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain DUF4176 PF13780.6 ORF2398 - 0.074 13.1 0.0 0.077 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4176) Abhydrolase_3 PF07859.13 ORF23964 - 1.6e-05 24.9 0.0 1.7e-05 24.8 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold VD10_N PF08476.10 ORF23785 - 0.025 14.2 0.1 0.042 13.5 0.1 1.4 1 0 0 1 1 1 0 Viral D10 N-terminal Med25 PF11232.8 ORF23753 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF23753 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein 5TM-5TMR_LYT PF07694.12 ORF23752 - 0.24 10.9 0.7 0.29 10.6 0.7 1.0 1 0 0 1 1 1 0 5TMR of 5TMR-LYT Auto_anti-p27 PF06677.12 ORF22882 - 2.3e-12 46.9 1.3 3e-12 46.5 1.3 1.2 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) T4-Gluco-transf PF09198.10 ORF22638 - 0.017 14.7 1.0 0.023 14.3 0.9 1.3 1 1 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase ACT PF01842.25 ORF22638 - 0.073 12.9 0.1 0.11 12.3 0.1 1.4 1 1 0 1 1 1 0 ACT domain Pox_A3L PF05288.11 ORF22638 - 0.12 12.4 0.7 0.37 10.8 0.3 1.7 1 1 0 1 1 1 0 Poxvirus A3L Protein TPK_B1_binding PF04265.14 ORF22521 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Tmemb_9 PF05434.11 ORF22343 - 0.19 11.6 3.3 0.22 11.4 3.3 1.0 1 0 0 1 1 1 0 TMEM9 Herpes_LMP1 PF05297.11 ORF22343 - 2.5 7.2 6.1 2.3 7.3 6.1 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) adh_short PF00106.25 ORF22198 - 0.011 15.2 0.0 0.012 15.1 0.0 1.0 1 0 0 1 1 1 0 short chain dehydrogenase PglL_A PF15864.5 ORF22198 - 0.27 11.0 0.9 0.43 10.3 0.9 1.3 1 0 0 1 1 1 0 Protein glycosylation ligase DUF2550 PF10739.9 ORF22174 - 0.067 13.2 0.2 0.072 13.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2550) mRNA_decap_C PF16741.5 ORF21998 - 0.017 14.4 0.0 0.028 13.7 0.0 1.3 1 0 0 1 1 1 0 mRNA-decapping enzyme C-terminus Peptidase_C97 PF05903.14 ORF21815 - 3.8e-10 39.8 0.0 4.3e-10 39.6 0.0 1.0 1 0 0 1 1 1 1 PPPDE putative peptidase domain LRAT PF04970.13 ORF21815 - 0.044 14.1 0.0 0.044 14.1 0.0 1.2 1 0 0 1 1 1 0 Lecithin retinol acyltransferase Arena_nucleocap PF00843.17 ORF21319 - 0.019 13.9 0.1 0.019 13.9 0.1 1.0 1 0 0 1 1 1 0 Arenavirus nucleocapsid N-terminal domain TIMELESS PF04821.14 ORF21319 - 0.054 12.8 0.2 0.056 12.7 0.2 1.1 1 0 0 1 1 1 0 Timeless protein Choline_transpo PF04515.12 ORF21005 - 0.1 11.8 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Plasma-membrane choline transporter CYSTM PF12734.7 ORF20977 - 0.0036 17.6 0.0 0.0046 17.2 0.0 1.3 1 0 0 1 1 1 1 Cysteine-rich TM module stress tolerance WD40 PF00400.32 ORF20759 - 3.9e-07 30.6 0.0 6e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 WD domain, G-beta repeat NADH-G_4Fe-4S_3 PF10588.9 ORF1983 - 0.15 11.6 0.1 0.27 10.8 0.1 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF4428 PF14471.6 ORF19717 - 0.036 14.0 2.4 0.042 13.8 0.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4428) HAP2-GCS1 PF10699.9 ORF19383 - 0.099 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Male gamete fusion factor TT_ORF1 PF02956.14 ORF19383 - 5.7 5.5 8.9 5.1 5.6 8.9 1.0 1 0 0 1 1 1 0 TT viral orf 1 GPR15L PF15854.5 ORF18025 - 0.049 13.9 0.2 0.052 13.8 0.2 1.1 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 TAP_C PF03943.13 ORF1768 - 0.042 13.5 0.1 0.052 13.2 0.1 1.2 1 0 0 1 1 1 0 TAP C-terminal domain DUF364 PF04016.12 ORF17329 - 0.14 11.7 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Putative heavy-metal chelation Membr_traf_MHD PF10540.9 ORF17002 - 0.04 14.1 0.6 0.04 14.1 0.6 1.1 1 0 0 1 1 1 0 Munc13 (mammalian uncoordinated) homology domain RCC1 PF00415.18 ORF16769 - 0.053 14.2 0.0 0.066 13.8 0.0 1.2 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat Col_cuticle_N PF01484.17 ORF16029 - 0.6 10.2 3.6 0.36 10.9 1.7 1.6 1 1 1 2 2 2 0 Nematode cuticle collagen N-terminal domain SAP PF02037.27 ORF15857 - 0.024 14.4 0.0 0.033 13.9 0.0 1.2 1 0 0 1 1 1 0 SAP domain STELLO PF03385.17 ORF15204 - 0.004 16.0 0.4 0.0041 16.0 0.4 1.0 1 0 0 1 1 1 1 STELLO glycosyltransferases UPF1_Zn_bind PF09416.10 ORF15204 - 0.031 14.2 0.3 0.035 14.1 0.3 1.0 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) EF-hand_1 PF00036.32 ORF14878 - 3.6e-06 26.1 0.4 7.7e-06 25.1 0.4 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF14878 - 0.0002 21.0 1.0 0.00057 19.6 0.2 2.0 2 1 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF14878 - 0.0014 19.1 0.6 0.002 18.5 0.6 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_4 PF12763.7 ORF14878 - 0.0036 17.2 0.7 0.0037 17.2 0.7 1.1 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_8 PF13833.6 ORF14878 - 0.014 15.2 1.0 0.022 14.6 1.0 1.4 1 0 0 1 1 1 0 EF-hand domain pair DUF3488 PF11992.8 ORF148 - 0.081 11.9 1.3 0.096 11.6 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) zf-RanBP PF00641.18 ORF1452 - 1.4e-07 30.7 5.3 3.9e-07 29.3 1.2 2.1 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others C1_2 PF03107.16 ORF1452 - 0.046 14.0 1.5 0.046 14.0 1.5 2.0 2 0 0 2 2 2 0 C1 domain Cytochrome_C7 PF14522.6 ORF1452 - 0.051 13.6 5.6 0.068 13.2 5.6 1.2 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c NCD3G PF07562.14 ORF1452 - 0.07 13.1 8.1 0.81 9.7 3.5 2.1 1 1 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR zinc-ribbon_6 PF10005.9 ORF1452 - 0.21 12.3 6.5 0.31 11.7 2.1 2.0 1 1 1 2 2 2 0 zinc-ribbon domain DZR PF12773.7 ORF1452 - 0.23 11.5 10.0 1.8 8.6 10.1 2.0 1 1 0 1 1 1 0 Double zinc ribbon MqsA_antitoxin PF15731.5 ORF1452 - 0.34 11.0 3.5 0.19 11.9 0.6 1.7 1 1 1 2 2 2 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA zf-CCHC PF00098.23 ORF1452 - 0.58 10.3 0.6 0.58 10.3 0.6 3.1 3 0 0 3 3 3 0 Zinc knuckle zinc_ribbon_2 PF13240.6 ORF1452 - 0.59 9.9 10.9 6.5 6.6 5.5 2.6 2 1 0 2 2 2 0 zinc-ribbon domain zf-Mss51 PF13824.6 ORF1452 - 0.71 10.0 8.1 18 5.5 3.3 3.0 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 YhfH PF14149.6 ORF1452 - 1 9.4 8.3 4.1 7.5 3.5 2.3 2 0 0 2 2 2 0 YhfH-like protein zf-C2H2_3 PF13878.6 ORF1452 - 1.1 9.2 8.0 0.31 10.9 1.7 2.4 2 1 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO HypA PF01155.19 ORF1452 - 1.3 9.1 7.9 0.16 12.0 2.7 1.8 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HalOD2 PF18547.1 ORF1452 - 9.8 6.2 13.2 2.2e+03 -1.4 13.3 2.8 1 1 0 1 1 1 0 Halobacterial output domain 2 zf-H2C2_2 PF13465.6 ORF13735 - 3.1e-13 49.5 5.3 2.8e-08 33.8 0.2 2.8 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF13735 - 1.6e-08 34.5 9.4 3e-05 24.2 0.5 2.4 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF13735 - 2.7e-05 24.6 8.1 0.018 15.8 0.4 2.4 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_5 PF13909.6 ORF13735 - 0.029 14.1 0.6 0.029 14.1 0.6 3.1 4 0 0 4 4 4 0 C2H2-type zinc-finger domain zf-C2H2_jaz PF12171.8 ORF13735 - 0.12 12.7 0.4 17 5.8 0.0 2.5 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding Spp-24 PF07448.11 ORF13735 - 0.14 12.4 0.1 16 5.7 0.1 2.1 2 0 0 2 2 2 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain zf-C2H2_6 PF13912.6 ORF13735 - 0.2 11.7 0.3 0.2 11.7 0.3 2.9 3 1 0 3 3 3 0 C2H2-type zinc finger Meckelin PF09773.9 ORF13280 - 4e-09 35.2 1.2 4.2e-09 35.1 1.2 1.0 1 0 0 1 1 1 1 Meckelin (Transmembrane protein 67) SieB PF14163.6 ORF13127 - 0.019 14.5 2.1 0.02 14.4 2.1 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B DUF4083 PF13314.6 ORF13127 - 0.03 14.3 3.3 0.034 14.1 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Sec15 PF04091.12 ORF12617 - 0.0037 16.7 0.4 0.0037 16.7 0.4 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like Cmc1 PF08583.10 ORF12489 - 0.032 14.2 2.4 0.11 12.5 0.5 2.0 1 1 1 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like Pax7 PF12360.8 ORF12385 - 0.066 13.4 0.4 0.095 12.9 0.4 1.2 1 0 0 1 1 1 0 Paired box protein 7 Milton PF12448.8 ORF12260 - 0.11 12.6 0.0 0.11 12.6 0.0 1.0 1 0 0 1 1 1 0 Kinesin associated protein PH_3 PF14593.6 ORF12087 - 1.7e-08 34.5 0.1 1.9e-08 34.4 0.1 1.0 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF12087 - 0.033 14.4 0.1 0.042 14.1 0.1 1.3 1 1 0 1 1 1 0 Pleckstrin homology domain HTH_ABP1_N PF18107.1 ORF11452 - 0.035 13.8 0.1 0.048 13.4 0.1 1.3 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain Bmt2 PF11968.8 ORF11373 - 0.08 12.8 0.4 0.09 12.6 0.4 1.0 1 0 0 1 1 1 0 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 TPK_B1_binding PF04265.14 ORF11232 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain WW PF00397.26 ORF112095 - 9.9e-10 38.3 0.0 1.7e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 WW domain DUF3797 PF12677.7 ORF111889 - 0.037 13.9 0.5 0.062 13.2 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3797) Cpn10 PF00166.21 ORF111790 - 5e-11 42.5 0.1 5.3e-11 42.4 0.1 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Av_adeno_fibre PF06536.11 ORF111790 - 0.0084 16.0 0.2 0.0087 15.9 0.2 1.2 1 0 0 1 1 1 1 Avian adenovirus fibre, N-terminal B56 PF01603.20 ORF111352 - 3.1e-06 26.4 0.5 3.2e-06 26.4 0.5 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) DUF4719 PF15843.5 ORF111226 - 0.12 12.5 1.1 0.12 12.5 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) Methyltransf_2 PF00891.18 ORF111173 - 0.11 11.8 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 O-methyltransferase domain DUF3793 PF12672.7 ORF111171 - 0.042 13.9 0.3 0.044 13.8 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3793) Spore_YtfJ PF09579.10 ORF11027 - 0.16 12.2 1.0 0.32 11.2 1.0 1.5 1 1 0 1 1 1 0 Sporulation protein YtfJ (Spore_YtfJ) Cofilin_ADF PF00241.20 ORF110164 - 1.9e-06 27.7 0.1 2.3e-06 27.4 0.1 1.1 1 0 0 1 1 1 1 Cofilin/tropomyosin-type actin-binding protein Phos_pyr_kin PF08543.12 ORF110164 - 0.16 11.4 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase ESP PF16590.5 ORF109534 - 0.065 13.5 0.0 0.081 13.2 0.0 1.2 1 0 0 1 1 1 0 Exocrine gland-secreting peptide TnpV PF14198.6 ORF109478 - 0.13 12.2 1.2 0.15 12.0 1.2 1.1 1 0 0 1 1 1 0 Transposon-encoded protein TnpV Acyl-CoA_ox_N PF14749.6 ORF10907 - 8.4e-05 23.1 0.0 8.4e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Med25 PF11232.8 ORF108808 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF108808 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein Milton PF12448.8 ORF107833 - 0.11 12.6 0.0 0.11 12.6 0.0 1.0 1 0 0 1 1 1 0 Kinesin associated protein Acyltransf_C PF16076.5 ORF10775 - 0.00033 20.7 0.4 0.00094 19.2 0.4 1.8 1 1 0 1 1 1 1 Acyltransferase C-terminus ClpB_D2-small PF10431.9 ORF10766 - 2.2e-05 24.5 0.0 2.5e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein K_channel_TID PF07941.11 ORF107440 - 0.18 12.3 2.4 0.19 12.2 2.4 1.2 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain Nipped-B_C PF12830.7 ORF106944 - 0.087 12.8 0.0 0.093 12.7 0.0 1.0 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus DUF2258 PF10015.9 ORF106944 - 0.1 12.7 0.5 0.13 12.4 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2258) DUF2777 PF10949.8 ORF106687 - 0.037 13.7 0.0 0.041 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) Cm_res_leader PF08077.11 ORF106567 - 0.074 13.1 2.0 0.44 10.8 0.1 2.6 3 0 0 3 3 3 0 Chloramphenicol resistance gene leader peptide TIP39 PF14980.6 ORF106062 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 TIP39 peptide Tmemb_18A PF09771.9 ORF106004 - 0.089 13.2 0.1 0.1 13.0 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 188 CENP-N PF05238.13 ORF106004 - 0.2 10.9 0.6 0.21 10.8 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like SICA_C PF12879.7 ORF104913 - 0.048 13.7 0.0 0.052 13.6 0.0 1.1 1 0 0 1 1 1 0 SICA C-terminal inner membrane domain TPK_B1_binding PF04265.14 ORF104531 - 0.013 15.2 0.2 0.081 12.7 0.2 1.9 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain DUF366 PF04017.12 ORF104407 - 0.019 14.4 0.3 0.019 14.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF366) PAS_5 PF07310.13 ORF104260 - 0.034 13.9 0.0 0.045 13.5 0.0 1.1 1 0 0 1 1 1 0 PAS domain 7TM_GPCR_Srab PF10292.9 ORF103825 - 0.11 11.3 2.3 0.12 11.3 2.3 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor DUF4965 PF16335.5 ORF10381 - 0.049 13.3 0.0 0.056 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4965) T4SS PF07996.11 ORF103569 - 0.026 14.9 0.2 0.027 14.9 0.2 1.1 1 0 0 1 1 1 0 Type IV secretion system proteins XhlA PF10779.9 ORF103569 - 0.12 12.5 1.2 0.15 12.3 1.2 1.1 1 0 0 1 1 1 0 Haemolysin XhlA Sugar_tr PF00083.24 ORF103458 - 0.0031 16.5 1.7 0.0031 16.5 1.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter LrgA PF03788.14 ORF102526 - 1.5e-12 47.2 3.6 1.8e-12 47.1 3.6 1.1 1 0 0 1 1 1 1 LrgA family LrgB PF04172.16 ORF102526 - 0.039 13.5 0.3 0.041 13.4 0.3 1.0 1 0 0 1 1 1 0 LrgB-like family U62_UL91 PF17442.2 ORF102475 - 0.087 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins ESX-1_EspG PF14011.6 ORF102433 - 0.0077 15.9 0.8 0.0083 15.8 0.8 1.0 1 0 0 1 1 1 1 EspG family Clat_adaptor_s PF01217.20 ORF102251 - 0.00043 20.2 0.1 0.00061 19.7 0.1 1.3 1 1 0 1 1 1 1 Clathrin adaptor complex small chain cNMPbd_u2 PF16643.5 ORF102195 - 0.74 10.3 3.8 0.83 10.1 3.8 1.1 1 0 0 1 1 1 0 Unstructured region on cNMP-binding protein DUF1582 PF07621.11 ORF102034 - 0.092 12.7 1.8 0.16 11.9 1.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1582) NPCC PF08058.11 ORF101466 - 0.17 11.9 0.8 0.18 11.9 0.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component V_cholerae_RfbT PF05575.11 ORF100936 - 0.024 13.9 0.7 0.027 13.8 0.7 1.0 1 0 0 1 1 1 0 Vibrio cholerae RfbT protein MAGE_N PF12440.8 ORF100000 - 0.53 11.0 5.0 0.56 10.9 5.0 1.1 1 0 0 1 1 1 0 Melanoma associated antigen family N terminal DUF5457 PF17540.2 NODE_89322_length_181_cov_0.821918_g81381_i0forward_frame_1 - 0.15 12.1 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5457) Pox_A14 PF05767.12 NODE_89321_length_181_cov_0.821918_g81380_i0reverse_frame_1 - 0.041 14.0 0.4 0.051 13.7 0.4 1.1 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 TPR_4 PF07721.14 NODE_89320_length_181_cov_0.821918_g81379_i0forward_frame_1 - 0.096 13.4 1.2 0.29 11.9 1.2 1.8 1 1 0 1 1 1 0 Tetratricopeptide repeat Metallophos PF00149.28 NODE_89320_length_181_cov_0.821918_g81379_i0forward_frame_1 - 0.11 12.9 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase Lamprin PF06403.11 NODE_89313_length_181_cov_0.876712_g81372_i0forward_frame_1 - 0.027 14.4 2.6 0.03 14.3 2.6 1.1 1 0 0 1 1 1 0 Lamprin DUF520 PF04461.13 NODE_89311_length_181_cov_0.904110_g81370_i0reverse_frame_1 - 0.092 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF520) DUF2990 PF11693.8 NODE_89310_length_181_cov_0.904110_g81369_i0forward_frame_1 - 0.19 11.9 0.0 0.24 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) DUF4597 PF15366.6 NODE_89308_length_181_cov_0.910959_g81367_i0reverse_frame_1 - 0.11 12.3 1.2 0.15 11.8 1.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4597) ATP-synt_S1 PF05827.12 NODE_89302_length_181_cov_0.965753_g81361_i0forward_frame_1 - 0.12 12.2 0.7 0.14 12.0 0.7 1.1 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) Ribosomal_S11 PF00411.19 NODE_89301_length_181_cov_0.972603_g81360_i0reverse_frame_1 - 0.045 14.2 0.0 0.05 14.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S11 ThrE_2 PF12821.7 NODE_89297_length_181_cov_0.993151_g81356_i0reverse_frame_1 - 0.027 14.6 0.0 0.027 14.6 0.0 1.1 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE Aldo_ket_red PF00248.21 NODE_89294_length_181_cov_1.000000_g81353_i0forward_frame_1 - 0.00061 19.1 0.0 0.00061 19.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Rdx PF10262.9 NODE_89275_length_181_cov_1.068493_g81334_i0forward_frame_1 - 0.2 11.9 0.2 0.2 11.9 0.2 1.7 2 0 0 2 2 2 0 Rdx family Phage_C PF12025.8 NODE_89273_length_181_cov_1.075342_g81332_i0reverse_frame_1 - 0.023 14.6 0.0 0.028 14.3 0.0 1.3 1 0 0 1 1 1 0 Phage protein C Ephrin_rec_like PF07699.13 NODE_89265_length_181_cov_1.082192_g81324_i0reverse_frame_1 - 0.0062 16.3 4.4 0.0062 16.3 4.4 1.9 2 1 0 2 2 2 1 Putative ephrin-receptor like HemY_N PF07219.13 NODE_89264_length_181_cov_1.082192_g81323_i0forward_frame_1 - 0.2 11.9 1.5 0.2 11.9 1.5 1.1 1 0 0 1 1 1 0 HemY protein N-terminus DUF3328 PF11807.8 NODE_89264_length_181_cov_1.082192_g81323_i0forward_frame_1 - 0.2 11.4 0.5 0.23 11.2 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) PHD_2 PF13831.6 NODE_89260_length_181_cov_1.082192_g81319_i0forward_frame_1 - 0.018 14.6 3.9 0.034 13.7 3.9 1.5 1 1 0 1 1 1 0 PHD-finger TMEM208_SND2 PF05620.11 NODE_89250_length_181_cov_1.089041_g81309_i0forward_frame_1 - 0.43 10.3 2.2 0.51 10.1 2.2 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 MBOAT PF03062.19 NODE_89248_length_181_cov_1.089041_g81307_i0reverse_frame_1 - 2.4e-10 40.3 0.0 2.7e-10 40.1 0.0 1.0 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family zf-P11 PF03854.14 NODE_89248_length_181_cov_1.089041_g81307_i0reverse_frame_1 - 0.048 13.3 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 P-11 zinc finger Atg31 PF09795.9 NODE_89242_length_181_cov_1.089041_g81301_i0reverse_frame_1 - 0.094 12.7 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Autophagy-related protein 31 Eno-Rase_NADH_b PF12242.8 NODE_89242_length_181_cov_1.089041_g81301_i0forward_frame_1 - 0.14 12.0 0.4 0.16 11.8 0.4 1.3 1 1 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CmlA_N PF18456.1 NODE_89235_length_181_cov_1.089041_g81294_i0forward_frame_1 - 0.16 11.3 0.0 0.16 11.3 0.0 1.0 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain HSL_N PF06350.12 NODE_89234_length_181_cov_1.089041_g81293_i0forward_frame_1 - 0.12 11.3 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Hormone-sensitive lipase (HSL) N-terminus L_biotic_typeA PF04604.13 NODE_89224_length_181_cov_1.095890_g81283_i0reverse_frame_1 - 0.6 10.0 2.7 0.45 10.4 1.3 1.6 1 1 0 1 1 1 0 Type-A lantibiotic NinB PF05772.12 NODE_89195_length_181_cov_1.095890_g81254_i0reverse_frame_1 - 0.15 11.8 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 NinB protein DUF3742 PF12553.8 NODE_89195_length_181_cov_1.095890_g81254_i0forward_frame_1 - 0.031 14.4 2.4 0.037 14.1 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) DUF4282 PF14110.6 NODE_89195_length_181_cov_1.095890_g81254_i0forward_frame_1 - 0.16 12.7 6.0 0.19 12.5 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) DUF3447 PF11929.8 NODE_89193_length_181_cov_1.095890_g81252_i0forward_frame_1 - 0.023 14.6 0.2 0.029 14.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3447) ABC_export PF16962.5 NODE_89147_length_181_cov_1.095890_g81206_i0forward_frame_1 - 0.21 10.0 0.3 0.22 10.0 0.3 1.0 1 0 0 1 1 1 0 Putative ABC exporter CholecysA-Rec_N PF09193.10 NODE_89137_length_181_cov_1.109589_g81196_i0reverse_frame_1 - 0.078 13.0 0.1 0.099 12.6 0.1 1.1 1 0 0 1 1 1 0 Cholecystokinin A receptor, N-terminal AP2 PF00847.20 NODE_89132_length_181_cov_1.143836_g81191_i0forward_frame_1 - 1 9.6 4.1 1.6 9.0 4.1 1.5 1 1 0 1 1 1 0 AP2 domain DUF4217 PF13959.6 NODE_89127_length_181_cov_1.157534_g81186_i0forward_frame_1 - 0.096 12.9 0.2 0.14 12.4 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4217) GT-D PF08759.11 NODE_89119_length_181_cov_1.184932_g81178_i0forward_frame_1 - 0.075 12.7 1.9 0.077 12.7 1.9 1.0 1 0 0 1 1 1 0 Glycosyltransferase GT-D fold EF-hand_9 PF14658.6 NODE_89098_length_181_cov_1.246575_g81157_i0reverse_frame_1 - 0.1 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain Atrophin-1 PF03154.15 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_1 - 0.018 13.3 5.6 0.019 13.3 5.6 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_1 - 0.18 11.8 5.8 0.19 11.7 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) RPT PF13446.6 NODE_89085_length_181_cov_1.280822_g81144_i0reverse_frame_1 - 0.083 12.8 0.2 0.12 12.3 0.2 1.4 1 0 0 1 1 1 0 A repeated domain in UCH-protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks409.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks409.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks409.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks409.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:23:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_M14 PF00246.24 ORF96736 - 9e-27 94.6 1.8 9e-27 94.6 1.8 1.5 2 0 0 2 2 2 1 Zinc carboxypeptidase AstE_AspA PF04952.14 ORF96736 - 3.5e-05 23.0 0.0 6.4e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Asp_protease PF09668.10 ORF93343 - 2.6e-54 182.3 0.4 4.3e-54 181.6 0.4 1.3 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 ORF93343 - 1.4e-19 70.4 0.7 2.5e-19 69.6 0.1 1.8 2 0 0 2 2 2 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 ORF93343 - 3.5e-09 37.2 0.0 7.9e-09 36.0 0.0 1.6 1 0 0 1 1 1 1 Aspartyl protease ubiquitin PF00240.23 ORF93343 - 1.9e-08 33.9 0.2 3.7e-08 33.0 0.2 1.5 1 0 0 1 1 1 1 Ubiquitin family RVP_2 PF08284.11 ORF93343 - 4.6e-06 26.4 0.0 8.9e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 Retroviral aspartyl protease RVP PF00077.20 ORF93343 - 0.0021 18.4 0.0 0.0043 17.3 0.0 1.5 1 0 0 1 1 1 1 Retroviral aspartyl protease Ubiquitin_4 PF18036.1 ORF93343 - 0.094 12.8 0.9 2.8 8.0 0.0 2.4 1 1 1 2 2 2 0 Ubiquitin-like domain UBA PF00627.31 ORF93343 - 0.13 12.2 0.1 0.32 11.0 0.1 1.8 1 0 0 1 1 1 0 UBA/TS-N domain Nrap_D3 PF17404.2 ORF93343 - 0.16 12.0 0.0 0.28 11.2 0.0 1.3 1 0 0 1 1 1 0 Nrap protein domain 3 Gly_acyl_tr_N PF06021.11 ORF87633 - 0.091 12.9 8.9 2.2 8.3 7.6 2.3 2 0 0 2 2 2 0 Aralkyl acyl-CoA:amino acid N-acyltransferase AAA_5 PF07728.14 ORF87633 - 0.12 12.4 0.2 5.8 6.9 0.2 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF4407 PF14362.6 ORF87633 - 1 8.6 7.3 1.5 8.1 7.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) EF-hand_7 PF13499.6 ORF87289 - 9.4e-06 26.0 0.5 2.5e-05 24.6 0.5 1.7 1 0 0 1 1 1 1 EF-hand domain pair ubiquitin PF00240.23 ORF87289 - 5.8e-05 22.8 0.0 0.00011 21.9 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin family EF-hand_6 PF13405.6 ORF87289 - 0.0035 17.1 0.2 0.068 13.1 0.0 2.6 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF87289 - 0.0041 16.5 0.4 0.013 15.0 0.0 2.0 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF87289 - 0.0088 15.5 0.4 0.13 11.9 0.0 2.5 2 0 0 2 2 2 1 EF hand Clathrin-link PF09268.10 ORF87289 - 0.13 11.6 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 Clathrin, heavy-chain linker Rad60-SLD PF11976.8 ORF87289 - 0.16 11.8 0.0 0.33 10.8 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Abhydrolase_1 PF00561.20 ORF87052 - 2.2e-13 50.4 0.1 3.3e-12 46.6 0.1 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF87052 - 0.00053 19.3 0.0 0.62 9.3 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydro_lipase PF04083.16 ORF87052 - 0.44 10.2 1.7 0.6 9.7 0.6 1.8 2 0 0 2 2 2 0 Partial alpha/beta-hydrolase lipase region FragX_IP PF05994.11 ORF80656 - 0.0054 14.9 0.3 0.0054 14.9 0.3 1.6 2 0 0 2 2 2 1 Cytoplasmic Fragile-X interacting family Spidroin_N PF16763.5 ORF80656 - 0.013 15.5 0.9 0.027 14.5 0.9 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1, spider silk protein 1, N-term Pentapeptide PF00805.22 ORF80641 - 0.15 11.7 0.4 5.9 6.6 0.0 2.4 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) MFS_1_like PF12832.7 ORF80127 - 3.8e-31 108.3 15.2 5.1e-31 107.9 15.2 1.0 1 0 0 1 1 1 1 MFS_1 like family Peptidase_C1 PF00112.23 ORF73304 - 9.8e-59 199.1 3.8 1.8e-58 198.2 3.8 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF73304 - 6.2e-13 49.0 3.7 6.2e-13 49.0 3.7 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF73304 - 1e-05 24.5 0.2 0.073 11.8 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Propeptide_C1 PF08127.13 ORF73304 - 0.012 15.4 0.0 0.034 14.0 0.0 1.8 2 0 0 2 2 2 0 Peptidase family C1 propeptide Mtc PF03820.17 ORF73149 - 1.1e-85 287.5 0.0 1.2e-85 287.3 0.0 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier Glyco_transf_22 PF03901.17 ORF73149 - 0.12 11.6 1.0 0.14 11.4 0.1 1.5 2 0 0 2 2 2 0 Alg9-like mannosyltransferase family ADH_N PF08240.12 ORF72751 - 2.1e-26 91.9 3.2 3.7e-26 91.1 2.2 1.9 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF72751 - 3.8e-25 88.3 0.1 1.1e-24 86.8 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF72751 - 2.2e-07 30.6 0.0 3.2e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF72751 - 6.5e-07 30.5 0.0 1.9e-06 28.9 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 ORF72751 - 0.021 14.2 0.0 0.039 13.3 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DapB_N PF01113.20 ORF72751 - 0.027 14.6 0.1 0.13 12.4 0.1 2.0 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus ThiF PF00899.21 ORF72751 - 0.027 13.8 1.0 0.36 10.2 0.1 2.1 2 0 0 2 2 2 0 ThiF family Methyltransf_25 PF13649.6 ORF72751 - 0.053 14.2 0.0 0.11 13.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DUF4436 PF14494.6 ORF72751 - 0.059 12.6 0.0 1.7 7.9 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4436) MCU PF04678.13 ORF56281 - 1.4e-18 67.6 0.2 2.1e-18 67.0 0.2 1.3 1 0 0 1 1 1 1 Mitochondrial calcium uniporter Claudin_2 PF13903.6 ORF56281 - 0.021 14.6 0.0 0.034 13.9 0.0 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction G-patch_2 PF12656.7 ORF5245 - 0.064 13.4 0.2 0.12 12.5 0.2 1.3 1 0 0 1 1 1 0 G-patch domain Peripla_BP_3 PF13377.6 ORF43701 - 3.6e-36 125.0 0.4 1.1e-35 123.4 0.1 1.9 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF43701 - 9.2e-28 97.4 0.0 1.2e-27 97.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 ORF43701 - 1.4e-21 76.0 1.4 7.9e-21 73.6 1.2 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 ORF43701 - 2.3e-12 47.0 0.0 8.1e-12 45.3 0.0 1.9 1 1 0 1 1 1 1 Periplasmic binding protein domain HTH_Tnp_ISL3 PF13542.6 ORF43701 - 4.1e-05 22.9 1.3 0.0034 16.8 0.3 3.2 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 HTH_3 PF01381.22 ORF43701 - 0.0039 17.2 0.0 0.0083 16.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix PucR PF07905.11 ORF43701 - 0.012 15.9 0.0 0.15 12.3 0.0 2.3 2 0 0 2 2 2 0 Purine catabolism regulatory protein-like family HTH_26 PF13443.6 ORF43701 - 0.038 14.4 0.0 0.072 13.5 0.0 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_23 PF13384.6 ORF43701 - 0.047 13.5 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain MerR PF00376.23 ORF43701 - 0.052 13.3 0.2 0.11 12.3 0.2 1.6 1 0 0 1 1 1 0 MerR family regulatory protein HTH_31 PF13560.6 ORF43701 - 0.055 13.8 0.4 0.18 12.2 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_17 PF12728.7 ORF43701 - 0.064 13.5 0.0 0.17 12.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3853 PF12964.7 ORF43701 - 0.1 12.8 0.0 0.22 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3853) HTH_38 PF13936.6 ORF43701 - 0.42 10.4 3.8 0.44 10.3 0.1 2.6 3 0 0 3 3 3 0 Helix-turn-helix domain Pentapeptide PF00805.22 ORF4038 - 0.15 11.7 0.4 5.9 6.6 0.0 2.4 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) Fibin PF15819.5 ORF39700 - 0.013 15.2 0.9 0.027 14.2 0.9 1.5 1 0 0 1 1 1 0 Fin bud initiation factor homologue Adeno_GP19K PF04881.13 ORF39700 - 0.027 14.5 0.0 0.055 13.5 0.0 1.5 1 0 0 1 1 1 0 Adenovirus GP19K UDPGT PF00201.18 ORF39077 - 1.7e-21 76.6 0.0 2e-21 76.4 0.0 1.0 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF39077 - 1.1e-05 25.5 0.0 1.8e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain TPT PF03151.16 ORF38424 - 9.9e-17 61.2 3.9 1.2e-16 60.9 3.9 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF38424 - 9.9e-11 42.0 25.3 1.9e-07 31.3 5.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family MFS_1 PF07690.16 ORF3046 - 2.8e-05 23.2 25.2 3.1e-05 23.1 23.4 2.0 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF3046 - 0.023 13.6 20.0 0.075 11.9 11.3 2.9 3 0 0 3 3 3 0 Sugar (and other) transporter LRR_6 PF13516.6 ORF261 - 0.15 12.2 5.2 47 4.4 0.1 5.2 5 0 0 5 5 5 0 Leucine Rich repeat DNA_pol3_delt_C PF14840.6 ORF2559 - 1.8e-73 244.7 6.2 1.8e-73 244.7 6.2 1.7 2 0 0 2 2 2 1 Processivity clamp loader gamma complex DNA pol III C-term DNA_pol3_delta PF06144.13 ORF2559 - 3.2e-47 160.5 0.1 5.3e-47 159.8 0.1 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit HTH_18 PF12833.7 ORF2559 - 0.019 15.2 1.3 0.91 9.8 0.0 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain Sulfotransfer_3 PF13469.6 ORF25268 - 2.7e-07 31.2 0.1 0.041 14.3 0.0 2.6 1 1 0 2 2 2 2 Sulfotransferase family Sulfotransfer_1 PF00685.27 ORF25268 - 2.2e-05 24.1 0.0 5.9e-05 22.7 0.0 1.6 1 1 0 1 1 1 1 Sulfotransferase domain BBL5 PF07289.11 ORF2242 - 5.9e-129 429.9 1.3 6.6e-129 429.7 1.3 1.0 1 0 0 1 1 1 1 Bardet-Biedl syndrome 5 protein Voldacs PF03517.13 ORF2242 - 4.1e-05 23.7 0.3 0.021 14.9 0.0 2.5 2 0 0 2 2 2 2 Regulator of volume decrease after cellular swelling Vps36_ESCRT-II PF11605.8 ORF2242 - 6.9e-05 23.0 0.0 0.06 13.5 0.0 2.5 2 0 0 2 2 2 2 Vacuolar protein sorting protein 36 Vps36 bPH_3 PF14470.6 ORF2242 - 0.0021 18.4 0.1 0.021 15.2 0.0 2.2 2 0 0 2 2 2 1 Bacterial PH domain Hen1_Lam_C PF18441.1 ORF2242 - 0.0086 15.9 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 1 Hen1 La-motif C-terminal domain IFT81_CH PF18383.1 ORF20866 - 3e-21 76.0 0.0 3e-21 76.0 0.0 2.7 2 1 1 3 3 3 1 Intraflagellar transport 81 calponin homology domain Tricorn_C1 PF14684.6 ORF20866 - 0.068 13.3 0.4 0.35 11.0 0.0 2.4 3 0 0 3 3 3 0 Tricorn protease C1 domain LPP PF04728.13 ORF20866 - 0.23 11.9 7.3 0.67 10.4 1.2 3.2 2 1 0 2 2 2 0 Lipoprotein leucine-zipper HALZ PF02183.18 ORF20866 - 0.47 10.7 7.7 9.2 6.6 1.3 3.3 2 1 1 3 3 3 0 Homeobox associated leucine zipper TSC22 PF01166.18 ORF20866 - 0.9 9.9 7.6 26 5.2 3.6 3.4 2 1 1 3 3 3 0 TSC-22/dip/bun family DUF1664 PF07889.12 ORF20866 - 1.3 9.1 17.5 3.2 7.8 4.5 3.6 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) Thioredoxin_8 PF13905.6 ORF18765 - 1.2e-36 124.9 0.0 1.3e-26 92.7 0.0 2.8 3 0 0 3 3 3 2 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF18765 - 7.3e-10 39.3 0.0 7.5e-07 29.6 0.0 2.7 3 0 0 3 3 3 2 Thioredoxin-like domain Thioredoxin PF00085.20 ORF18765 - 1.7e-09 37.6 0.2 8.4e-05 22.5 0.0 3.9 3 1 1 4 4 4 1 Thioredoxin Redoxin PF08534.10 ORF18765 - 2.6e-09 36.9 0.0 2.4e-08 33.8 0.0 2.2 2 0 0 2 2 2 1 Redoxin AhpC-TSA PF00578.21 ORF18765 - 1.8e-08 34.4 0.1 2.5e-07 30.7 0.0 2.4 3 0 0 3 3 3 1 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF18765 - 0.0031 17.6 0.1 0.41 10.9 0.0 3.2 2 1 0 2 2 2 1 Thioredoxin-like RLL PF10036.9 ORF18765 - 0.0088 15.9 0.0 0.49 10.2 0.0 2.5 2 1 1 3 3 3 1 RNA transcription, translation and transport factor protein HyaE PF07449.11 ORF18765 - 0.029 14.3 0.2 6.2 6.8 0.0 3.4 3 1 0 3 3 3 0 Hydrogenase-1 expression protein HyaE Thioredoxin_6 PF13848.6 ORF18765 - 0.041 13.8 0.0 0.6 10.0 0.0 2.6 3 0 0 3 3 3 0 Thioredoxin-like domain TraF PF13728.6 ORF18765 - 0.14 12.0 0.0 7.1 6.4 0.0 2.5 2 0 0 2 2 2 0 F plasmid transfer operon protein DUF434 PF04256.12 ORF15125 - 0.022 14.4 1.1 0.18 11.5 0.3 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF434) Potassium_chann PF11404.8 ORF15125 - 0.22 11.3 0.6 0.61 9.9 0.4 1.8 2 0 0 2 2 2 0 Potassium voltage-gated channel RSN1_7TM PF02714.15 ORF12813 - 0.0024 17.3 2.4 0.0035 16.7 2.4 1.3 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate Glyco_hydro_77 PF02446.17 ORF12813 - 0.54 9.0 5.6 0.74 8.6 5.6 1.1 1 0 0 1 1 1 0 4-alpha-glucanotransferase TFR_dimer PF04253.15 ORF12813 - 1.6 8.8 6.7 4.1 7.5 3.5 2.7 2 1 0 2 2 2 0 Transferrin receptor-like dimerisation domain DUF4407 PF14362.6 ORF12813 - 5.5 6.3 6.7 10 5.4 6.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TPP_enzyme_C PF02775.21 ORF109067 - 1.2e-34 119.3 0.1 2.2e-34 118.5 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF109067 - 4.7e-13 49.1 0.2 1.9e-12 47.1 0.0 2.1 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, central domain HlyD_3 PF13437.6 ORF106011 - 8.6e-20 71.4 0.1 1.3e-12 48.3 0.0 2.7 2 1 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 ORF106011 - 1.6e-18 66.2 0.0 3.3e-16 58.8 0.1 2.9 2 0 0 2 2 2 1 Biotin-lipoyl like HlyD_D23 PF16576.5 ORF106011 - 5.8e-17 61.6 0.8 5.2e-16 58.5 0.8 2.0 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 ORF106011 - 4.1e-10 39.4 0.0 6.5e-10 38.8 0.0 1.3 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 ORF106011 - 6.1e-05 22.8 0.0 0.055 13.3 0.1 2.4 2 0 0 2 2 2 2 Biotin-requiring enzyme HlyD_2 PF12700.7 ORF106011 - 0.05 12.3 0.0 0.11 11.2 0.0 1.4 2 0 0 2 2 2 0 HlyD family secretion protein OEP PF02321.18 ORF106011 - 0.08 12.7 12.8 0.068 13.0 11.8 1.4 1 1 0 1 1 1 0 Outer membrane efflux protein PTS_EIIA_1 PF00358.20 ORF106011 - 0.1 12.4 0.0 1.7 8.4 0.0 2.5 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Thioredoxin_8 PF13905.6 ORF101410 - 1.2e-36 124.9 0.0 1.3e-26 92.7 0.0 2.8 3 0 0 3 3 3 2 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF101410 - 7.3e-10 39.3 0.0 7.5e-07 29.6 0.0 2.7 3 0 0 3 3 3 2 Thioredoxin-like domain Thioredoxin PF00085.20 ORF101410 - 1.7e-09 37.6 0.2 8.4e-05 22.5 0.0 3.9 3 1 1 4 4 4 1 Thioredoxin Redoxin PF08534.10 ORF101410 - 2.6e-09 36.9 0.0 2.4e-08 33.8 0.0 2.2 2 0 0 2 2 2 1 Redoxin AhpC-TSA PF00578.21 ORF101410 - 1.8e-08 34.4 0.1 2.5e-07 30.7 0.0 2.4 3 0 0 3 3 3 1 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF101410 - 0.0031 17.6 0.1 0.41 10.9 0.0 3.2 2 1 0 2 2 2 1 Thioredoxin-like RLL PF10036.9 ORF101410 - 0.0088 15.9 0.0 0.49 10.2 0.0 2.5 2 1 1 3 3 3 1 RNA transcription, translation and transport factor protein HyaE PF07449.11 ORF101410 - 0.029 14.3 0.2 6.2 6.8 0.0 3.4 3 1 0 3 3 3 0 Hydrogenase-1 expression protein HyaE Thioredoxin_6 PF13848.6 ORF101410 - 0.041 13.8 0.0 0.6 10.0 0.0 2.6 3 0 0 3 3 3 0 Thioredoxin-like domain TraF PF13728.6 ORF101410 - 0.14 12.0 0.0 7.1 6.4 0.0 2.5 2 0 0 2 2 2 0 F plasmid transfer operon protein MTS PF05175.14 ORF10097 - 3.6e-61 205.6 0.0 5.2e-61 205.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MTS_N PF08468.11 ORF10097 - 1e-56 191.4 0.0 2e-56 190.4 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase small domain N-terminal Methyltransf_25 PF13649.6 ORF10097 - 5.9e-12 46.1 0.3 2.3e-11 44.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF10097 - 3.4e-11 43.1 0.0 5.6e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF10097 - 1.4e-08 35.4 0.0 3.4e-08 34.1 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain PrmA PF06325.13 ORF10097 - 1.6e-08 34.3 0.0 2.4e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 ORF10097 - 4e-06 27.4 0.0 7.9e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF10097 - 3.3e-05 23.6 0.0 0.00045 19.9 0.0 2.0 2 0 0 2 2 2 1 Nodulation protein S (NodS) Methyltransf_23 PF13489.6 ORF10097 - 3.9e-05 23.5 0.0 0.00015 21.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.7 ORF10097 - 0.00051 20.0 0.0 0.00089 19.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 ORF10097 - 0.0064 16.2 0.0 0.017 14.8 0.0 1.6 2 0 0 2 2 2 1 Lysine methyltransferase Cons_hypoth95 PF03602.15 ORF10097 - 0.008 15.8 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_2 PF00891.18 ORF10097 - 0.0084 15.4 0.0 0.013 14.8 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain Ubie_methyltran PF01209.18 ORF10097 - 0.014 14.8 0.0 0.026 13.9 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family UPF0020 PF01170.18 ORF10097 - 0.019 14.7 0.0 0.031 14.0 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 GidB PF02527.15 ORF10097 - 0.038 13.3 0.1 0.065 12.5 0.1 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_10 PF05971.12 ORF10097 - 0.039 13.3 0.0 0.1 11.9 0.0 1.5 1 1 0 1 1 1 0 RNA methyltransferase tRNA_U5-meth_tr PF05958.11 ORF10097 - 0.047 12.7 0.0 0.068 12.2 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase N6_Mtase PF02384.16 ORF10097 - 0.083 12.1 0.0 2.5 7.3 0.0 2.7 2 1 0 2 2 2 0 N-6 DNA Methylase CMAS PF02353.20 ORF10097 - 0.091 12.0 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase FmrO PF07091.11 ORF10097 - 0.096 12.2 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) DSPc PF00782.20 NODE_18582_length_1025_cov_1019.008081_g14172_i0reverse_frame_1 - 0.001 18.9 0.8 0.0022 17.8 0.7 1.7 1 1 0 1 1 1 1 Dual specificity phosphatase, catalytic domain zf-CCHC PF00098.23 NODE_18520_length_1028_cov_177.572004_g14118_i0reverse_frame_3 - 0.49 10.6 10.6 1.1 9.5 3.9 2.3 2 0 0 2 2 2 0 Zinc knuckle CcdA PF07362.12 NODE_18496_length_1029_cov_110.636821_g14098_i0reverse_frame_3 - 0.055 13.9 0.0 0.1 13.0 0.0 1.4 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA Ion_trans PF00520.31 NODE_18483_length_1029_cov_238.398390_g2290_i3reverse_frame_2 - 8.6e-05 21.9 0.9 8.6e-05 21.9 0.9 3.1 2 1 0 2 2 2 1 Ion transport protein Ion_trans PF00520.31 NODE_18480_length_1029_cov_497.597586_g2290_i2forward_frame_2 - 8.6e-05 21.9 0.9 8.6e-05 21.9 0.9 3.1 2 1 0 2 2 2 1 Ion transport protein Peptidase_S24 PF00717.23 ORF97567 - 1.4e-12 47.3 0.1 4.2e-12 45.8 0.1 1.9 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 ORF97567 - 4.7e-12 45.9 0.0 8e-12 45.1 0.0 1.3 1 0 0 1 1 1 1 Signal peptidase, peptidase S26 Nif11 PF07862.11 ORF97567 - 0.099 13.0 0.0 0.2 12.0 0.0 1.5 1 0 0 1 1 1 0 Nif11 domain PX PF00787.24 ORF96763 - 6.9e-12 45.3 0.0 1.1e-11 44.7 0.0 1.3 1 0 0 1 1 1 1 PX domain Asp PF00026.23 ORF936 - 2.7e-30 105.9 8.7 3.4e-30 105.6 8.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF936 - 4.2e-06 27.1 9.0 0.0066 16.7 5.9 3.1 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 ORF936 - 0.0021 18.7 0.2 2.5 8.8 0.0 3.0 2 1 0 2 2 2 2 Aspartyl protease gag-asp_proteas PF13975.6 ORF936 - 0.12 12.9 0.0 5.3 7.7 0.0 2.7 3 0 0 3 3 3 0 gag-polyprotein putative aspartyl protease zf-CCCH PF00642.24 ORF91684 - 4.4e-06 26.5 3.5 8.7e-06 25.5 3.5 1.5 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF91684 - 8.3e-05 22.5 6.3 0.00017 21.6 6.3 1.5 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 ORF91684 - 0.00024 20.8 2.5 0.00047 19.9 2.5 1.5 1 0 0 1 1 1 1 CCCH-type zinc finger Torus PF16131.5 ORF91684 - 0.02 15.6 1.6 0.035 14.8 0.3 1.9 2 0 0 2 2 2 0 Torus domain zf-CCCH_2 PF14608.6 ORF91684 - 1.6 9.3 6.4 0.15 12.6 1.7 1.8 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger RabGAP-TBC PF00566.18 ORF91111 - 2e-40 138.8 0.0 2.6e-40 138.4 0.0 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Mis14 PF08641.12 ORF91111 - 0.11 12.8 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Kinetochore protein Mis14 like Lipase_3 PF01764.25 ORF88775 - 1.5e-27 96.2 0.0 2.2e-27 95.7 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Sigma70_r3 PF04539.16 ORF87058 - 8.2e-22 77.1 6.7 1.4e-20 73.2 1.8 3.3 3 0 0 3 3 3 1 Sigma-70 region 3 Sigma70_r2 PF04542.14 ORF87058 - 1.9e-21 75.6 0.4 4e-21 74.5 0.1 1.8 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 ORF87058 - 4.1e-17 61.4 3.7 2.7e-15 55.6 2.8 2.6 2 0 0 2 2 2 2 Sigma-70, region 4 Sigma70_r1_2 PF00140.20 ORF87058 - 1e-11 44.6 0.1 3.1e-11 43.1 0.1 1.9 1 0 0 1 1 1 1 Sigma-70 factor, region 1.2 Asp_protease_2 PF13650.6 ORF83613 - 7.2e-09 36.2 3.3 1.6e-05 25.4 0.0 3.1 3 1 0 3 3 3 2 Aspartyl protease gag-asp_proteas PF13975.6 ORF83613 - 6.8e-06 26.6 0.7 0.00065 20.2 0.0 2.9 3 0 0 3 3 3 1 gag-polyprotein putative aspartyl protease RVP PF00077.20 ORF83613 - 0.0017 18.6 0.1 0.2 12.0 0.0 3.2 3 0 0 3 3 3 1 Retroviral aspartyl protease Nbl1_Borealin_N PF10444.9 ORF83613 - 0.045 13.4 0.0 0.095 12.4 0.0 1.4 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal DHC_N1 PF08385.12 ORF83189 - 4.7e-21 75.1 3.8 6.6e-21 74.6 3.8 1.2 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 1 DUF1980 PF09323.10 ORF77153 - 0.01 15.7 2.2 0.021 14.7 0.5 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF1980) DUF1772 PF08592.11 ORF77153 - 4 7.7 16.8 2.3 8.5 0.4 3.4 3 1 0 3 3 3 0 Domain of unknown function (DUF1772) cNMP_binding PF00027.29 ORF75915 - 2.4e-25 88.4 0.0 5.6e-12 45.6 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Ion_trans_2 PF07885.16 ORF75299 - 6.8e-25 86.8 20.0 1.6e-12 47.2 6.7 2.3 2 1 0 2 2 2 2 Ion channel EF-hand_6 PF13405.6 ORF75299 - 1.6e-10 40.1 4.9 9.6e-05 22.0 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF75299 - 2.1e-10 39.4 6.2 5.3e-05 22.5 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF75299 - 3.9e-10 40.0 3.6 7.7e-10 39.1 2.4 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF75299 - 5.1e-09 35.2 7.4 8.8e-05 21.8 0.2 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF75299 - 2.8e-07 30.3 2.8 0.0026 17.6 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain pair PAP_fibrillin PF04755.12 ORF75299 - 0.18 11.7 0.0 0.31 11.0 0.0 1.3 1 0 0 1 1 1 0 PAP_fibrillin Peptidase_A24 PF01478.18 ORF75299 - 0.43 11.0 9.5 2 8.8 1.3 2.2 2 0 0 2 2 2 0 Type IV leader peptidase family Lig_chan PF00060.26 ORF75299 - 0.43 10.4 2.7 0.26 11.1 0.3 1.9 2 0 0 2 2 2 0 Ligand-gated ion channel DUF3883 PF13020.6 ORF71654 - 2.9e-22 78.5 2.5 5.4e-22 77.7 2.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3883) Arm PF00514.23 ORF68101 - 1e-06 28.6 5.7 0.06 13.4 0.1 5.4 5 1 0 5 5 5 2 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF68101 - 0.0038 17.7 17.1 0.33 11.5 0.6 4.9 5 3 1 6 6 6 2 HEAT-like repeat NUC130_3NT PF08158.12 ORF68101 - 0.011 16.0 0.1 0.032 14.5 0.1 1.8 1 0 0 1 1 1 0 NUC130/3NT domain KAP PF05804.12 ORF68101 - 0.21 9.7 0.0 0.28 9.3 0.0 1.2 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) Sushi PF00084.20 ORF67709 - 5.5e-15 55.7 15.9 0.0011 19.6 0.2 5.4 5 0 0 5 5 5 5 Sushi repeat (SCR repeat) CK_II_beta PF01214.18 ORF67709 - 0.093 12.5 1.2 0.17 11.6 0.1 1.7 1 1 1 2 2 2 0 Casein kinase II regulatory subunit DUF1980 PF09323.10 ORF67332 - 0.0034 17.3 2.1 0.021 14.7 0.5 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF1980) Rhodanese PF00581.20 ORF62237 - 2.6e-08 34.3 0.0 5.3e-08 33.3 0.0 1.6 1 0 0 1 1 1 1 Rhodanese-like domain DSPc PF00782.20 ORF61556 - 9.2e-05 22.3 0.0 0.00016 21.5 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain SH3_4 PF06347.13 ORF61556 - 0.0017 18.2 0.4 0.0053 16.5 0.4 1.9 1 0 0 1 1 1 1 Bacterial SH3 domain ATP_bind_2 PF03668.15 ORF61556 - 0.0025 17.1 0.0 0.0034 16.7 0.0 1.1 1 0 0 1 1 1 1 P-loop ATPase protein family SH3_3 PF08239.11 ORF61556 - 0.014 15.7 0.1 0.037 14.3 0.1 1.8 1 0 0 1 1 1 0 Bacterial SH3 domain FAP PF07174.11 ORF61556 - 3.5 7.0 27.4 11 5.4 26.7 2.0 2 0 0 2 2 2 0 Fibronectin-attachment protein (FAP) UPF0183 PF03676.14 ORF59513 - 5.8e-38 131.2 0.0 2.7e-36 125.7 0.0 2.0 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0183) MscS_TM PF12794.7 ORF59513 - 0.0056 15.6 0.3 0.0076 15.2 0.3 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel inner membrane domain 1 POC1 PF10450.9 ORF59408 - 0.021 13.8 0.0 0.032 13.2 0.0 1.2 1 0 0 1 1 1 0 POC1 chaperone NEMP PF10225.9 ORF42936 - 0.00012 21.9 0.1 0.00012 21.9 0.1 1.9 2 0 0 2 2 2 1 NEMP family Carboxyl_trans PF01039.22 ORF40577 - 3.3e-88 296.5 0.0 3.9e-88 296.3 0.0 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain FAST_1 PF06743.15 ORF35719 - 4.1e-05 23.4 8.8 0.11 12.4 0.1 5.5 4 2 4 8 8 8 3 FAST kinase-like protein, subdomain 1 DUF1601 PF07671.11 ORF35719 - 9.5e-05 22.2 0.9 10 6.1 0.0 6.4 8 0 0 8 8 8 2 Protein of unknown function (DUF1601) Methyltransf_21 PF05050.12 ORF35353 - 1e-09 38.7 0.2 4.4e-08 33.4 0.1 2.3 1 1 1 2 2 2 2 Methyltransferase FkbM domain ABC_tran PF00005.27 ORF34343 - 1.9e-18 67.3 0.0 2.9e-18 66.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF34343 - 7.1e-08 32.2 0.5 0.0019 17.7 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF34343 - 3e-06 27.3 1.1 0.048 13.5 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF34343 - 0.00054 19.9 0.1 0.0011 18.9 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 ORF34343 - 0.0017 18.0 0.1 0.0051 16.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF34343 - 0.0025 17.5 0.1 0.005 16.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 ORF34343 - 0.0042 17.5 1.1 0.14 12.6 0.5 2.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF34343 - 0.013 15.8 2.8 0.51 10.6 1.0 3.1 1 1 1 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF34343 - 0.021 15.0 0.1 0.052 13.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 ORF34343 - 0.026 14.6 1.4 0.7 9.9 0.2 2.3 2 1 0 2 2 2 0 Helicase HerA, central domain IstB_IS21 PF01695.17 ORF34343 - 0.033 13.9 0.2 0.087 12.6 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SSE PF00437.20 ORF34343 - 0.059 12.4 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 ORF34343 - 0.09 13.2 2.2 1 9.7 0.9 2.8 1 1 1 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 ORF34343 - 0.1 13.1 0.2 0.41 11.2 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 ORF34343 - 0.11 12.6 0.0 3.3 7.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 ORF34343 - 0.11 12.1 0.1 0.28 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF34343 - 0.13 12.7 0.0 0.43 11.0 0.1 1.9 2 0 0 2 2 1 0 RNA helicase MMR_HSR1 PF01926.23 ORF34343 - 0.13 12.3 0.0 0.51 10.4 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF34343 - 0.16 12.4 0.0 0.34 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF34343 - 0.25 11.2 1.0 0.62 10.0 0.0 2.1 2 1 0 2 2 2 0 NACHT domain PIP5K PF01504.18 ORF33467 - 2.5e-29 102.3 0.0 8.9e-27 94.0 0.0 2.0 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase DUF3883 PF13020.6 ORF30216 - 2.9e-22 78.5 2.5 5.4e-22 77.7 2.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3883) DUF3883 PF13020.6 ORF27109 - 2.9e-22 78.5 2.5 5.4e-22 77.7 2.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3883) DAGAT PF03982.13 ORF26466 - 7.2e-29 100.6 0.0 1e-28 100.1 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol acyltransferase AAA PF00004.29 ORF22806 - 1.3e-18 67.7 0.0 2.6e-18 66.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF22806 - 8.7e-06 25.8 0.0 2.4e-05 24.4 0.0 1.8 1 1 1 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF22806 - 6.3e-05 23.4 0.0 0.00026 21.4 0.0 1.9 1 1 1 2 2 2 1 AAA ATPase domain BCS1_N PF08740.11 ORF22806 - 0.0008 19.4 0.0 0.0015 18.6 0.0 1.4 1 0 0 1 1 1 1 BCS1 N terminal ATPase PF06745.13 ORF22806 - 0.0014 18.0 0.0 0.003 16.9 0.0 1.5 1 1 0 1 1 1 1 KaiC AAA_22 PF13401.6 ORF22806 - 0.0039 17.5 0.0 0.027 14.8 0.0 2.2 2 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 ORF22806 - 0.0042 17.5 0.0 0.0085 16.5 0.0 1.6 1 0 0 1 1 1 1 RNA helicase AAA_24 PF13479.6 ORF22806 - 0.0089 15.8 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF22806 - 0.013 16.0 0.0 0.019 15.5 0.0 1.3 1 0 0 1 1 1 0 ABC transporter NACHT PF05729.12 ORF22806 - 0.015 15.2 0.4 0.052 13.5 0.0 2.1 3 1 0 3 3 3 0 NACHT domain DUF815 PF05673.13 ORF22806 - 0.016 14.4 0.0 0.024 13.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 ORF22806 - 0.021 14.4 0.0 0.033 13.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_25 PF13481.6 ORF22806 - 0.031 13.8 0.0 0.8 9.2 0.0 2.1 1 1 1 2 2 2 0 AAA domain DUF2075 PF09848.9 ORF22806 - 0.061 12.5 0.0 0.092 12.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 ORF22806 - 0.07 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain SATase_N PF06426.14 ORF22806 - 0.081 13.3 0.1 1.1 9.6 0.0 2.3 2 0 0 2 2 2 0 Serine acetyltransferase, N-terminal PPV_E1_C PF00519.17 ORF22806 - 0.11 11.3 0.0 0.19 10.5 0.0 1.3 1 0 0 1 1 1 0 Papillomavirus helicase AAA_33 PF13671.6 ORF22806 - 0.15 12.2 0.0 0.59 10.3 0.0 1.9 2 1 0 2 2 2 0 AAA domain AAA_11 PF13086.6 ORF22806 - 0.17 11.7 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF22806 - 0.18 11.8 0.0 0.53 10.3 0.0 1.7 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TIP49 PF06068.13 ORF22806 - 0.19 10.9 0.0 0.28 10.3 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain RMI1_N PF08585.12 ORF22018 - 1.8e-07 31.2 2.8 1.8e-07 31.2 2.8 1.6 2 0 0 2 2 2 1 RecQ mediated genome instability protein Tenui_NCP PF04876.12 ORF22018 - 0.37 10.4 4.0 0.15 11.7 0.5 2.0 2 1 0 2 2 2 0 Tenuivirus major non-capsid protein CPSase_L_D3 PF02787.19 ORF22018 - 0.64 10.4 6.6 0.1 13.0 1.0 2.5 2 1 0 3 3 3 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DUF5365 PF17326.2 ORF22018 - 1.7 9.1 16.1 0.48 10.9 0.8 3.2 3 2 0 3 3 3 0 Family of unknown function (DUF5365) Pex19 PF04614.12 ORF19043 - 6.4e-22 78.5 40.9 2.9e-19 69.8 40.3 2.5 1 1 0 1 1 1 1 Pex19 protein family CdiI_2 PF18593.1 ORF19043 - 0.054 14.2 2.0 0.91 10.2 0.1 3.0 1 1 1 2 2 2 0 CdiI immunity protein BRCA2 PF00634.18 ORF19043 - 0.35 10.6 0.1 0.35 10.6 0.1 2.0 2 0 0 2 2 2 0 BRCA2 repeat DUF5388 PF17363.2 ORF19043 - 1.5 9.1 6.2 1.3 9.2 0.6 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5388) KinB_sensor PF16767.5 ORF19043 - 2.1 8.8 9.4 0.83 10.1 2.1 3.0 2 1 1 3 3 3 0 Sensor domain of alginate biosynthesis sensor protein KinB CCDC-167 PF15188.6 ORF19043 - 9.4 6.7 9.3 0.15 12.4 0.8 2.3 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 2OG-FeII_Oxy_3 PF13640.6 ORF18286 - 0.0012 19.7 0.0 0.0021 18.9 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily zf-NF-X1 PF01422.17 ORF16359 - 0.4 10.8 30.7 2 8.5 6.4 2.9 2 1 0 2 2 2 0 NF-X1 type zinc finger Aconitase PF00330.20 ORF103397 - 1.1e-34 120.2 0.0 1.1e-32 113.6 0.0 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Ketoacyl-synt_C PF02801.22 ORF103397 - 0.1 12.6 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Beta-ketoacyl synthase, C-terminal domain DUF521 PF04412.13 ORF103397 - 0.11 11.1 0.0 0.22 10.2 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF521) Bac_rhamnosid6H PF17389.2 ORF103397 - 0.14 11.3 0.1 0.42 9.8 0.0 1.6 2 0 0 2 2 2 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain ABC_tran PF00005.27 ORF101427 - 1.9e-18 67.3 0.0 2.9e-18 66.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF101427 - 7.1e-08 32.2 0.5 0.0019 17.7 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF101427 - 3e-06 27.3 1.1 0.048 13.5 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF101427 - 0.00054 19.9 0.1 0.0011 18.9 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 ORF101427 - 0.0017 18.0 0.1 0.0051 16.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF101427 - 0.0025 17.5 0.1 0.005 16.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 ORF101427 - 0.0042 17.5 1.1 0.14 12.6 0.5 2.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF101427 - 0.013 15.8 2.8 0.51 10.6 1.0 3.1 1 1 1 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF101427 - 0.021 15.0 0.1 0.052 13.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 ORF101427 - 0.026 14.6 1.4 0.7 9.9 0.2 2.3 2 1 0 2 2 2 0 Helicase HerA, central domain IstB_IS21 PF01695.17 ORF101427 - 0.033 13.9 0.2 0.087 12.6 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SSE PF00437.20 ORF101427 - 0.059 12.4 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 ORF101427 - 0.09 13.2 2.2 1 9.7 0.9 2.8 1 1 1 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 ORF101427 - 0.1 13.1 0.2 0.41 11.2 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 ORF101427 - 0.11 12.6 0.0 3.3 7.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 ORF101427 - 0.11 12.1 0.1 0.28 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF101427 - 0.13 12.7 0.0 0.43 11.0 0.1 1.9 2 0 0 2 2 1 0 RNA helicase MMR_HSR1 PF01926.23 ORF101427 - 0.13 12.3 0.0 0.51 10.4 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF101427 - 0.16 12.4 0.0 0.34 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF101427 - 0.25 11.2 1.0 0.62 10.0 0.0 2.1 2 1 0 2 2 2 0 NACHT domain ADAM_CR_2 PF17771.1 NODE_18719_length_1021_cov_6.507099_g14287_i0reverse_frame_1 - 0.45 11.1 1.6 1.2 9.8 0.0 2.1 2 0 0 2 2 2 0 ADAM cysteine-rich domain PIP5K PF01504.18 NODE_18606_length_1024_cov_11843.612740_g14193_i0reverse_frame_2 - 1.9e-34 119.1 10.6 4.6e-34 117.9 10.6 1.6 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase DUF2654 PF10849.8 NODE_18606_length_1024_cov_11843.612740_g14193_i0reverse_frame_2 - 0.21 11.8 0.1 0.21 11.8 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2654) DUF5349 PF17298.2 NODE_18606_length_1024_cov_11843.612740_g14193_i0reverse_frame_2 - 0.32 10.7 8.5 0.45 10.2 8.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5349) SAM35 PF10806.8 NODE_18606_length_1024_cov_11843.612740_g14193_i0forward_frame_3 - 0.038 14.2 0.1 0.069 13.4 0.1 1.4 1 0 0 1 1 1 0 SAM35, subunit of SAM coomplex DSPc PF00782.20 NODE_18582_length_1025_cov_1019.008081_g14172_i0reverse_frame_2 - 9.7e-06 25.4 0.0 2.2e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain DUF4834 PF16118.5 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.0037 18.2 1.2 0.006 17.5 0.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4834) EGF_Tenascin PF18720.1 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.0038 17.2 5.4 0.0072 16.4 5.4 1.4 1 0 0 1 1 1 1 Tenascin EGF domain EGF PF00008.27 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.0059 16.9 9.6 0.011 16.0 9.6 1.5 1 0 0 1 1 1 1 EGF-like domain ABC_membrane PF00664.23 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.0084 15.8 0.1 0.013 15.1 0.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region EGF_2 PF07974.13 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.021 15.2 14.3 0.021 15.2 14.3 1.7 2 0 0 2 2 2 0 EGF-like domain hEGF PF12661.7 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.038 14.6 8.8 0.038 14.6 8.8 1.9 2 0 0 2 2 1 0 Human growth factor-like EGF SIT PF15330.6 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.11 13.0 0.1 0.44 11.0 0.0 1.9 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT FixP_N PF14715.6 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.11 12.3 0.5 0.19 11.5 0.5 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP TMEM154 PF15102.6 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.13 12.2 0.1 0.28 11.1 0.1 1.5 1 0 0 1 1 1 0 TMEM154 protein family DUF3328 PF11807.8 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.18 11.5 0.0 0.33 10.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) TMEM52 PF14979.6 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.26 11.2 0.4 0.55 10.1 0.0 1.6 2 0 0 2 2 2 0 Transmembrane 52 DUF1179 PF06678.11 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 0.29 11.1 0.7 0.62 10.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1179) ODV-E18 PF10717.9 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 1.3 8.9 2.8 3.1 7.7 2.8 1.6 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 EB PF01683.18 NODE_18557_length_1026_cov_534.475277_g14153_i0reverse_frame_2 - 3 8.2 9.4 0.9 9.9 6.4 1.7 2 0 0 2 2 2 0 EB module TMCO5 PF14992.6 NODE_18557_length_1026_cov_534.475277_g14153_i0forward_frame_3 - 1.1 8.7 2.2 1.8 8.0 2.2 1.3 1 0 0 1 1 1 0 TMCO5 family DUF1664 PF07889.12 ORF99513 - 0.4 10.7 9.8 0.55 10.3 2.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF99513 - 0.81 10.1 16.1 0.3 11.5 1.5 4.1 4 1 1 5 5 5 0 Flagella accessory protein C (FlaC) DUF4140 PF13600.6 ORF99513 - 2 8.9 14.8 0.83 10.1 0.2 3.6 3 1 1 4 4 4 0 N-terminal domain of unknown function (DUF4140) CTP_transf_like PF01467.26 ORF99513 - 2.7 8.2 8.3 39 4.4 8.3 2.5 1 1 0 1 1 1 0 Cytidylyltransferase-like DUF4407 PF14362.6 ORF99513 - 2.9 7.2 16.1 0.092 12.1 1.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Prefoldin_2 PF01920.20 ORF99513 - 3.2 7.7 23.5 6 6.9 0.8 3.9 4 0 0 4 4 4 0 Prefoldin subunit KxDL PF10241.9 ORF99513 - 4.1 7.8 12.4 6.5 7.1 0.3 4.1 3 1 1 4 4 4 0 Uncharacterized conserved protein Swi5 PF07061.11 ORF99513 - 6.1 7.0 15.6 0.24 11.5 0.5 3.6 3 1 1 4 4 4 0 Swi5 FlxA PF14282.6 ORF99513 - 9.1 6.3 12.7 9.9 6.2 3.2 2.6 2 0 0 2 2 2 0 FlxA-like protein ABC_tran PF00005.27 ORF9940 - 6.6e-30 104.4 0.0 1.1e-29 103.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF9940 - 1.3e-07 31.3 0.5 8.1e-05 22.2 0.3 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF9940 - 0.015 15.0 0.0 0.038 13.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF9940 - 0.017 15.2 0.1 0.066 13.3 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_16 PF13191.6 ORF9940 - 0.036 14.4 0.1 0.078 13.4 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 ORF9940 - 0.036 14.6 0.0 0.078 13.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF9940 - 0.041 13.6 0.0 0.15 11.8 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_21 PF13304.6 ORF9940 - 0.042 13.7 0.1 2 8.1 0.0 2.2 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 ORF9940 - 0.054 13.9 0.3 0.89 10.0 0.3 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 ORF9940 - 0.095 11.9 1.2 0.42 9.8 1.2 2.0 1 1 0 1 1 1 0 NB-ARC domain MeaB PF03308.16 ORF9940 - 0.11 11.4 0.0 0.17 10.8 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Lzipper-MIP1 PF14389.6 ORF9940 - 0.11 12.8 0.1 0.23 11.8 0.1 1.4 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 AAA_22 PF13401.6 ORF9940 - 0.13 12.6 0.1 0.38 11.0 0.1 1.8 1 1 0 1 1 1 0 AAA domain Epimerase PF01370.21 ORF97218 - 8.4e-22 77.8 0.0 1.2e-21 77.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF97218 - 1.9e-21 76.3 0.1 2.6e-21 75.8 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF97218 - 1.3e-13 51.1 0.1 1.5e-12 47.5 0.0 2.0 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF97218 - 1.8e-13 50.2 0.1 3.1e-12 46.2 0.1 2.1 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF97218 - 3.9e-13 49.7 0.0 5.5e-13 49.2 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF97218 - 3.6e-06 26.3 0.0 6.6e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NmrA PF05368.13 ORF97218 - 4.6e-05 23.1 0.1 0.00031 20.4 0.0 2.3 3 0 0 3 3 3 1 NmrA-like family KR PF08659.10 ORF97218 - 9.1e-05 22.4 0.0 0.00025 21.0 0.0 1.6 1 1 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 ORF97218 - 0.0065 15.6 0.1 0.047 12.8 0.0 2.0 2 0 0 2 2 2 1 RmlD substrate binding domain adh_short PF00106.25 ORF97218 - 0.095 12.1 0.0 0.61 9.5 0.0 2.3 2 1 0 2 2 2 0 short chain dehydrogenase BPD_transp_1 PF00528.22 ORF96870 - 2.8e-28 98.9 11.7 5.2e-28 98.0 11.7 1.4 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 ORF96870 - 3.1e-06 27.1 0.1 3.1e-06 27.1 0.1 3.5 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C Zip PF02535.22 ORF9394 - 4.3e-32 111.6 0.2 6.8e-32 111.0 0.2 1.2 1 0 0 1 1 1 1 ZIP Zinc transporter GEMIN8 PF15348.6 ORF9394 - 0.0051 17.1 4.7 0.0075 16.6 4.7 1.3 1 0 0 1 1 1 1 Gemini of Cajal bodies-associated protein 8 RPN7 PF10602.9 ORF89471 - 1.1e-57 194.6 0.7 1.9e-57 193.8 0.7 1.4 1 0 0 1 1 1 1 26S proteasome subunit RPN7 PCI PF01399.27 ORF89471 - 1.2e-13 51.5 0.1 2.3e-13 50.6 0.1 1.5 1 0 0 1 1 1 1 PCI domain PBP1_TM PF14812.6 ORF83630 - 0.033 14.6 2.4 0.057 13.8 2.4 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal MORN PF02493.20 ORF83630 - 0.14 12.1 2.9 0.29 11.1 0.2 2.6 2 0 0 2 2 2 0 MORN repeat FAM176 PF14851.6 ORF83630 - 0.19 11.4 2.1 0.34 10.6 2.1 1.4 1 0 0 1 1 1 0 FAM176 family Pox_Ag35 PF03286.14 ORF83630 - 1.1 9.0 6.4 1.9 8.2 6.4 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Inhibitor_I71 PF12628.7 ORF83630 - 6.9 6.5 9.9 18 5.1 7.0 2.6 2 1 0 2 2 2 0 Falstatin, cysteine peptidase inhibitor Beta-lactamase PF00144.24 ORF80881 - 8.7e-21 74.5 1.7 5.3e-19 68.6 1.7 2.0 1 1 0 1 1 1 1 Beta-lactamase CarboxypepD_reg PF13620.6 ORF75965 - 0.011 16.0 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain RMI1_C PF16099.5 ORF73469 - 0.064 13.1 0.2 1.1 9.2 0.1 2.2 2 0 0 2 2 2 0 Recq-mediated genome instability protein 1, C-terminal OB-fold Dodecin PF07311.12 ORF71852 - 1 9.6 5.2 7 7.0 0.0 3.2 4 0 0 4 4 4 0 Dodecin Sec20 PF03908.13 ORF71852 - 1.4 8.9 5.1 9.9 6.2 0.4 2.8 2 1 0 2 2 2 0 Sec20 Cob_adeno_trans PF01923.18 ORF71852 - 1.8 8.7 9.2 14 5.8 0.5 2.5 1 1 1 2 2 2 0 Cobalamin adenosyltransferase ADH_zinc_N_2 PF13602.6 ORF66131 - 1.3e-18 68.3 0.0 2.5e-18 67.4 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 ORF66131 - 1.1e-16 61.0 0.0 2.1e-16 60.1 0.0 1.5 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF66131 - 0.00077 19.3 0.0 0.022 14.6 0.0 2.5 1 1 1 2 2 2 2 Alcohol dehydrogenase GroES-like domain Hexapep PF00132.24 ORF61227 - 5.1e-29 98.9 42.7 9e-10 37.9 4.9 6.0 3 2 3 7 7 7 7 Bacterial transferase hexapeptide (six repeats) LpxD PF04613.14 ORF61227 - 1.2e-21 76.2 0.0 2e-21 75.5 0.0 1.3 1 0 0 1 1 1 1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Hexapep_2 PF14602.6 ORF61227 - 7.6e-14 51.2 43.9 1e-07 31.6 8.0 5.8 3 2 2 5 5 5 4 Hexapeptide repeat of succinyl-transferase HSBP1 PF06825.12 ORF61227 - 0.022 14.6 0.2 0.045 13.6 0.2 1.4 1 0 0 1 1 1 0 Heat shock factor binding protein 1 DUF4954 PF16314.5 ORF61227 - 2.8 6.0 11.8 0.91 7.6 2.1 2.2 1 1 2 3 3 3 0 Domain of unknown function (DUF4954) Ion_trans PF00520.31 ORF59193 - 5.3e-18 65.2 10.2 7.3e-18 64.7 10.2 1.2 1 0 0 1 1 1 1 Ion transport protein cNMP_binding PF00027.29 ORF59193 - 0.011 15.8 0.0 0.026 14.6 0.0 1.7 2 0 0 2 2 2 0 Cyclic nucleotide-binding domain Taxilin PF09728.9 ORF5783 - 3.7e-42 144.6 64.4 3.7e-42 144.6 64.4 2.0 1 1 1 2 2 2 1 Myosin-like coiled-coil protein Filament PF00038.21 ORF5783 - 0.0011 18.6 23.0 0.0011 18.6 23.0 3.7 1 1 3 4 4 4 3 Intermediate filament protein SHIPPO-rpt PF07004.12 ORF56183 - 0.00033 21.4 18.9 0.041 14.8 3.2 4.6 4 2 0 4 4 4 3 Sperm-tail PG-rich repeat DUF1440 PF07274.12 ORF51346 - 0.35 11.2 4.0 9 6.6 0.0 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1440) ADH_N PF08240.12 ORF51284 - 6.9e-32 109.6 2.5 1.4e-31 108.6 2.5 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF51284 - 2.5e-27 95.4 0.1 4.1e-27 94.7 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF51284 - 1.1e-07 31.5 0.1 2.6e-07 30.3 0.1 1.6 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF51284 - 1.4e-05 26.2 0.0 2.8e-05 25.2 0.0 1.5 2 0 0 2 2 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 ORF51284 - 0.00022 20.6 0.3 0.00033 20.0 0.3 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 ORF51284 - 0.0095 15.2 0.2 0.016 14.5 0.2 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 ORF51284 - 0.01 14.6 0.2 0.013 14.2 0.2 1.1 1 0 0 1 1 1 1 HI0933-like protein FAD_binding_2 PF00890.24 ORF51284 - 0.023 13.8 0.3 0.031 13.4 0.3 1.1 1 0 0 1 1 1 0 FAD binding domain FAD_oxidored PF12831.7 ORF51284 - 0.034 13.5 1.4 0.046 13.1 1.4 1.1 1 0 0 1 1 1 0 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 ORF51284 - 0.039 13.2 0.1 0.061 12.6 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF51284 - 0.058 12.6 0.1 0.069 12.4 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Methyltransf_25 PF13649.6 ORF51284 - 0.14 12.9 0.0 0.26 12.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 ORF51284 - 0.15 11.8 0.1 0.25 11.1 0.1 1.2 1 0 0 1 1 1 0 Lysine methyltransferase MTS PF05175.14 ORF51284 - 0.16 11.5 0.1 0.27 10.8 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Pyr_redox PF00070.27 ORF51284 - 0.29 11.7 1.6 0.31 11.6 0.3 1.8 2 0 0 2 2 1 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 ORF51284 - 1.1 8.8 3.1 0.49 10.0 0.1 1.8 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GTP_EFTU_D3 PF03143.17 ORF48111 - 2.5e-35 121.1 0.0 3.9e-35 120.5 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF48111 - 6.2e-07 29.7 1.0 1.3e-06 28.7 1.0 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.6 ORF48111 - 0.0017 18.2 2.2 0.003 17.4 0.4 2.2 2 1 0 2 2 2 1 Elongation factor Tu domain 4 ThiF PF00899.21 ORF40703 - 3.6e-27 95.3 0.2 5.1e-27 94.8 0.2 1.1 1 0 0 1 1 1 1 ThiF family E1_FCCH PF16190.5 ORF40703 - 1.3e-23 82.9 0.5 3.5e-23 81.6 0.5 1.7 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 FCCH domain E1_4HB PF16191.5 ORF40703 - 6.9e-17 61.4 0.1 1.2e-16 60.6 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 four-helix bundle F420_oxidored PF03807.17 ORF40703 - 0.012 16.2 0.5 0.27 11.8 0.5 2.4 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 ORF40703 - 0.024 14.7 0.4 0.11 12.5 0.1 2.1 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase Gp_dh_C PF02800.20 ORF39347 - 1.9e-65 219.3 0.0 2.6e-65 218.8 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 ORF39347 - 1.9e-35 121.2 0.1 4.9e-35 119.9 0.1 1.7 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ion_trans PF00520.31 ORF33555 - 6.9e-06 25.5 0.2 6.9e-06 25.5 0.2 2.6 2 1 1 3 3 3 1 Ion transport protein LsmAD PF06741.13 ORF28479 - 0.16 12.5 3.4 6.6 7.4 0.0 3.1 3 0 0 3 3 3 0 LsmAD domain CAMSAP_CH PF11971.8 ORF25416 - 0.095 12.6 2.0 0.47 10.3 0.8 2.4 1 1 1 2 2 2 0 CAMSAP CH domain Meckelin PF09773.9 ORF23483 - 1.6e-50 172.1 1.0 1.8e-50 171.9 1.0 1.0 1 0 0 1 1 1 1 Meckelin (Transmembrane protein 67) MOZART1 PF12554.8 ORF22327 - 0.0088 15.8 0.2 0.015 15.0 0.2 1.4 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated DUF2561 PF10812.8 ORF22327 - 5.5 7.0 6.0 2.2 8.3 2.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2561) PGM_PMM_III PF02880.16 ORF19434 - 2.2e-28 98.7 0.0 4.5e-28 97.7 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 ORF19434 - 4.8e-08 33.6 0.1 7.5e-07 29.7 0.1 2.6 2 1 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 ORF19434 - 4.6e-07 29.9 0.0 1e-06 28.8 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain UbiA PF01040.18 ORF14350 - 3.7e-33 114.9 6.9 4.9e-33 114.5 6.9 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family U-box PF04564.15 ORF12926 - 2.9e-14 53.0 0.0 5.6e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF12926 - 0.0038 17.3 0.0 0.0072 16.4 0.0 1.4 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein zf-Nse PF11789.8 ORF12926 - 0.035 13.9 0.0 0.064 13.1 0.0 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Dehydrin PF00257.19 ORF12926 - 0.05 14.2 3.7 0.11 13.1 3.7 1.7 1 0 0 1 1 1 0 Dehydrin zf-RING_UBOX PF13445.6 ORF12926 - 0.12 12.4 0.0 0.26 11.3 0.0 1.6 1 0 0 1 1 1 0 RING-type zinc-finger tRNA_U5-meth_tr PF05958.11 ORF106518 - 3e-19 69.3 0.1 2.2e-18 66.4 0.1 2.3 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_25 PF13649.6 ORF106518 - 1.5e-08 35.3 0.0 3.9e-08 33.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF106518 - 3.1e-08 33.6 0.0 5.5e-08 32.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 ORF106518 - 1.2e-06 28.4 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 ORF106518 - 1.7e-06 27.8 0.0 3.1e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 ORF106518 - 3.1e-06 26.8 0.0 5.3e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 ORF106518 - 7.6e-06 25.6 0.0 1.6e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 ORF106518 - 2.6e-05 24.1 0.0 4.3e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.12 ORF106518 - 4.1e-05 24.1 0.0 0.00014 22.5 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain AviRa PF11599.8 ORF106518 - 0.0012 18.4 0.9 0.0016 18.0 0.1 1.6 2 0 0 2 2 2 1 RRNA methyltransferase AviRa N6_N4_Mtase PF01555.18 ORF106518 - 0.0018 18.0 0.0 0.0031 17.2 0.0 1.3 1 0 0 1 1 1 1 DNA methylase Methyltransf_4 PF02390.17 ORF106518 - 0.0022 17.5 0.0 0.0038 16.7 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_23 PF13489.6 ORF106518 - 0.0025 17.7 0.0 0.0033 17.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 ORF106518 - 0.0044 16.6 0.0 0.0085 15.7 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase NodS PF05401.11 ORF106518 - 0.01 15.5 0.1 0.021 14.4 0.1 1.5 1 0 0 1 1 1 1 Nodulation protein S (NodS) DUF5590 PF17881.1 ORF106518 - 0.043 13.9 0.4 0.082 13.0 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5590) Ubie_methyltran PF01209.18 ORF106518 - 0.048 13.0 0.0 0.11 11.8 0.0 1.5 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF106518 - 0.09 12.7 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Pkinase PF00069.25 ORF106121 - 1.2e-52 178.9 0.0 1.5e-52 178.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF106121 - 4.1e-40 137.7 0.0 5e-40 137.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF106121 - 4.6e-09 36.0 0.0 6.3e-09 35.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF106121 - 0.15 10.8 0.0 0.22 10.3 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase EBP PF05241.12 ORF106121 - 0.18 11.3 0.1 0.3 10.5 0.1 1.3 1 0 0 1 1 1 0 Emopamil binding protein p450 PF00067.22 ORF100457 - 8.3e-15 54.5 2.2 1e-14 54.2 2.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 Aminotran_3 PF00202.21 NODE_18674_length_1023_cov_2.878543_g14247_i0reverse_frame_2 - 9.7e-116 386.8 0.1 1.1e-115 386.5 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 NODE_18674_length_1023_cov_2.878543_g14247_i0reverse_frame_2 - 1.4e-06 27.8 0.0 1.8e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 NODE_18674_length_1023_cov_2.878543_g14247_i0reverse_frame_2 - 0.0049 15.9 0.0 0.0095 14.9 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V CxC2 PF18803.1 NODE_18674_length_1023_cov_2.878543_g14247_i0forward_frame_3 - 0.042 14.0 0.0 0.1 12.7 0.0 1.6 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases Hyd_WA PF06462.12 NODE_18674_length_1023_cov_2.878543_g14247_i0forward_frame_3 - 0.52 10.4 4.2 12 6.0 0.1 3.0 3 0 0 3 3 3 0 Propeller NinD PF17466.2 NODE_18674_length_1023_cov_2.878543_g14247_i0forward_frame_2 - 0.9 9.7 7.4 0.75 9.9 2.3 2.6 2 0 0 2 2 2 0 Family of unknown function DASH_Dad4 PF08650.10 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_3 - 0.54 10.3 6.8 6 6.9 0.3 3.5 3 0 0 3 3 3 0 DASH complex subunit Dad4 EGF PF00008.27 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.001 19.3 8.7 0.0019 18.4 8.7 1.4 1 0 0 1 1 1 1 EGF-like domain DUF4834 PF16118.5 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.0021 19.0 0.1 0.006 17.5 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) ABC_membrane PF00664.23 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.0084 15.8 0.1 0.013 15.2 0.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region hEGF PF12661.7 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.054 14.1 6.9 0.054 14.1 6.9 1.9 2 0 0 2 2 1 0 Human growth factor-like EGF EGF_Tenascin PF18720.1 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.097 12.7 5.2 0.18 11.9 5.2 1.4 1 0 0 1 1 1 0 Tenascin EGF domain FixP_N PF14715.6 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.11 12.3 0.5 0.19 11.5 0.5 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP SIT PF15330.6 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.12 12.8 0.1 0.44 11.0 0.0 1.9 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT TMEM154 PF15102.6 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.13 12.1 0.1 0.28 11.1 0.1 1.5 1 0 0 1 1 1 0 TMEM154 protein family DUF3328 PF11807.8 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.19 11.5 0.0 0.33 10.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) TMEM52 PF14979.6 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.25 11.3 0.4 0.55 10.1 0.0 1.7 2 0 0 2 2 2 0 Transmembrane 52 DUF1179 PF06678.11 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 0.26 11.3 0.6 0.6 10.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1179) ODV-E18 PF10717.9 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 1.3 9.0 2.8 3.1 7.7 2.8 1.6 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 EB PF01683.18 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 1.8 9.0 8.7 0.58 10.5 5.8 1.7 2 0 0 2 2 2 0 EB module EGF_2 PF07974.13 NODE_18656_length_1023_cov_558.963563_g14230_i0reverse_frame_2 - 6.1 7.3 18.9 0.59 10.5 14.3 1.7 2 0 0 2 2 2 0 EGF-like domain DnaJ PF00226.31 ORF96494 - 0.069 13.3 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 DnaJ domain CSD PF00313.22 ORF95457 - 5e-05 23.1 0.4 0.0018 18.1 0.1 2.2 2 0 0 2 2 2 2 'Cold-shock' DNA-binding domain Transformer PF06495.11 ORF95457 - 0.19 11.8 18.0 0.3 11.2 18.0 1.3 1 0 0 1 1 1 0 Fruit fly transformer protein Methyltransf_7 PF03492.15 ORF94755 - 9.1e-35 120.4 0.0 1.2e-34 120.1 0.0 1.2 1 0 0 1 1 1 1 SAM dependent carboxyl methyltransferase SHOCT PF09851.9 ORF94755 - 3.9 7.3 4.2 1.4 8.7 0.2 2.1 2 0 0 2 2 2 0 Short C-terminal domain Nrap_D5 PF17406.2 ORF86397 - 0.066 13.0 0.8 0.47 10.2 0.1 2.1 2 0 0 2 2 2 0 Nrap protein PAP/OAS1-like domain 5 HTH_53 PF18606.1 ORF86397 - 0.13 12.0 0.1 0.26 11.0 0.1 1.5 1 0 0 1 1 1 0 Zap helix turn helix N-terminal domain Cgr1 PF03879.14 ORF86397 - 9.6 6.6 15.7 28 5.2 5.5 2.5 1 1 1 2 2 2 0 Cgr1 family Cupin_8 PF13621.6 ORF83923 - 4e-06 26.8 0.1 9.2e-05 22.3 0.0 2.1 1 1 1 2 2 2 2 Cupin-like domain Response_reg PF00072.24 ORF78494 - 4.7e-31 107.3 0.8 7.2e-30 103.4 0.5 2.2 2 0 0 2 2 2 1 Response regulator receiver domain Hpt PF01627.23 ORF78494 - 3.2e-13 49.8 0.1 3.2e-13 49.8 0.1 2.5 3 0 0 3 3 3 1 Hpt domain DUF4407 PF14362.6 ORF72299 - 2.6 7.3 18.4 1.9 7.8 5.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Nicastrin PF05450.15 ORF69119 - 0.092 12.2 5.0 0.051 13.0 3.0 1.6 1 1 0 1 1 1 0 Nicastrin GAF PF01590.26 ORF53415 - 1.2e-33 116.6 0.0 1.7e-15 57.8 0.0 2.1 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 ORF53415 - 1.1e-20 74.3 0.0 6.8e-09 36.1 0.0 2.7 2 1 0 2 2 2 2 GAF domain GAF_3 PF13492.6 ORF53415 - 1.6e-14 54.3 0.0 4.6e-06 27.0 0.0 2.7 2 1 0 2 2 2 2 GAF domain DUF1577 PF07614.11 ORF53415 - 0.11 11.5 0.1 3.3 6.7 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1577) SH3_10 PF17902.1 ORF53415 - 0.13 12.4 0.0 0.31 11.2 0.0 1.6 1 0 0 1 1 1 0 SH3 domain CTD_bind PF04818.13 ORF47093 - 1.3e-06 29.1 0.0 3.1e-06 27.9 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase II-binding domain. PAH PF02671.21 ORF47058 - 0.06 13.5 0.4 0.34 11.1 0.0 2.4 3 0 0 3 3 3 0 Paired amphipathic helix repeat Methyltransf_7 PF03492.15 ORF43762 - 9.1e-35 120.4 0.0 1.2e-34 120.1 0.0 1.2 1 0 0 1 1 1 1 SAM dependent carboxyl methyltransferase SHOCT PF09851.9 ORF43762 - 3.9 7.3 4.2 1.4 8.7 0.2 2.1 2 0 0 2 2 2 0 Short C-terminal domain PAH PF02671.21 ORF3345 - 0.06 13.5 0.4 0.34 11.1 0.0 2.4 3 0 0 3 3 3 0 Paired amphipathic helix repeat GAS2 PF02187.17 ORF27443 - 0.00058 19.9 0.0 0.0013 18.7 0.0 1.6 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain HOOK PF05622.12 ORF27443 - 0.0029 15.9 8.2 0.0029 15.9 8.2 2.1 1 1 1 2 2 2 1 HOOK protein JIP_LZII PF16471.5 ORF27443 - 0.0041 17.3 5.5 0.0041 17.3 5.5 4.3 1 1 3 4 4 3 1 JNK-interacting protein leucine zipper II CENP-F_leu_zip PF10473.9 ORF27443 - 0.0056 16.7 38.4 1.2 9.1 15.0 3.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlaC_arch PF05377.11 ORF27443 - 0.023 15.1 1.9 0.023 15.1 1.9 5.1 2 2 2 4 4 4 0 Flagella accessory protein C (FlaC) TMF_TATA_bd PF12325.8 ORF27443 - 0.033 14.4 29.1 0.62 10.3 2.0 4.2 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding SlyX PF04102.12 ORF27443 - 0.053 14.1 1.7 0.053 14.1 1.7 4.0 1 1 2 3 3 2 0 SlyX Spc7 PF08317.11 ORF27443 - 0.056 12.3 35.6 0.71 8.7 22.9 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF3584 PF12128.8 ORF27443 - 0.12 9.8 29.9 0.22 9.0 29.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) GAS PF13851.6 ORF27443 - 0.17 11.2 34.4 0.32 10.3 21.6 2.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF812 PF05667.11 ORF27443 - 0.17 10.7 34.8 1.6 7.5 10.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Phage_GP20 PF06810.11 ORF27443 - 0.19 11.5 39.1 2.1 8.1 7.8 3.5 1 1 2 3 3 3 0 Phage minor structural protein GP20 TolA_bind_tri PF16331.5 ORF27443 - 0.2 11.7 24.0 3.9 7.6 0.1 4.0 1 1 2 4 4 4 0 TolA binding protein trimerisation Fez1 PF06818.15 ORF27443 - 0.23 11.9 31.6 0.27 11.7 21.0 2.3 1 1 1 2 2 2 0 Fez1 Tropomyosin_1 PF12718.7 ORF27443 - 0.31 11.2 43.9 0.24 11.5 26.1 2.8 1 1 1 2 2 2 0 Tropomyosin like UPF0242 PF06785.11 ORF27443 - 0.33 11.0 38.6 3.8 7.6 8.2 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus YjbH PF06082.11 ORF27443 - 0.34 9.7 6.2 0.44 9.3 6.2 1.1 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH DUF4407 PF14362.6 ORF27443 - 0.44 9.9 27.3 1.3 8.3 26.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Exonuc_VII_L PF02601.15 ORF27443 - 0.45 10.0 14.9 0.73 9.3 14.9 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4618 PF15397.6 ORF27443 - 0.55 9.6 27.3 2.2 7.6 0.6 3.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) TPR_MLP1_2 PF07926.12 ORF27443 - 0.67 10.0 36.3 1.7 8.7 12.7 3.3 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Filament PF00038.21 ORF27443 - 0.7 9.4 30.0 2.7 7.5 4.7 2.7 1 1 2 3 3 3 0 Intermediate filament protein CLZ PF16526.5 ORF27443 - 1.3 9.4 23.9 0.18 12.2 5.0 3.6 1 1 3 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Golgin_A5 PF09787.9 ORF27443 - 1.9 7.9 34.1 2.6 7.4 5.5 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 PI3K_P85_iSH2 PF16454.5 ORF27443 - 2 8.0 27.4 1.7 8.2 1.9 3.4 1 1 2 3 3 3 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain MCC-bdg_PDZ PF10506.9 ORF27443 - 2.1 8.4 17.0 0.64 10.1 1.1 4.1 4 1 1 5 5 4 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Pox_A_type_inc PF04508.12 ORF27443 - 2.4 8.1 6.1 13 5.8 0.1 3.3 3 0 0 3 3 2 0 Viral A-type inclusion protein repeat Prominin PF05478.11 ORF27443 - 2.4 6.0 13.1 3.7 5.4 13.1 1.3 1 0 0 1 1 1 0 Prominin DUF4200 PF13863.6 ORF27443 - 2.8 8.4 35.0 19 5.7 3.9 3.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4200) HIP1_clath_bdg PF16515.5 ORF27443 - 3.6 8.2 32.8 4.3 8.0 3.6 3.3 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 APG6_N PF17675.1 ORF27443 - 6.7 7.3 42.5 7.2 7.2 17.7 2.5 1 1 1 2 2 2 0 Apg6 coiled-coil region YlqD PF11068.8 ORF27443 - 8.3 6.8 28.8 7.5 6.9 8.4 2.6 1 1 1 2 2 2 0 YlqD protein Arc_C PF18162.1 ORF25128 - 0.011 15.6 1.0 0.57 10.1 0.0 2.8 2 1 1 3 3 3 0 Arc C-lobe Cnn_1N PF07989.11 ORF22715 - 0.011 15.9 3.2 0.011 15.9 3.2 2.9 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 Rootletin PF15035.6 ORF22715 - 0.016 15.3 3.5 0.016 15.3 3.5 2.2 2 0 0 2 2 2 0 Ciliary rootlet component, centrosome cohesion Speriolin_N PF15058.6 ORF22715 - 0.02 15.0 0.4 0.067 13.3 0.1 1.9 2 0 0 2 2 2 0 Speriolin N terminus ZapB PF06005.12 ORF22715 - 0.048 14.1 2.4 0.048 14.1 2.4 3.1 2 1 1 3 3 3 0 Cell division protein ZapB BRE1 PF08647.11 ORF22715 - 0.11 12.5 10.2 2.1 8.5 4.1 2.8 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase Taxilin PF09728.9 ORF22715 - 0.13 11.5 14.4 0.24 10.6 4.2 2.2 2 0 0 2 2 2 0 Myosin-like coiled-coil protein GAS PF13851.6 ORF22715 - 0.2 11.0 16.5 0.32 10.3 5.7 3.0 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding Csm1_N PF18504.1 ORF22715 - 0.26 11.6 8.3 5.7 7.4 3.1 2.9 2 1 0 2 2 2 0 Csm1 N-terminal domain YabA PF06156.13 ORF22715 - 0.69 10.6 8.4 0.27 11.9 1.4 2.9 2 1 1 3 3 3 0 Initiation control protein YabA APG6_N PF17675.1 ORF22715 - 1.3 9.5 14.1 2.5 8.6 5.6 2.5 2 0 0 2 2 2 0 Apg6 coiled-coil region bZIP_2 PF07716.15 ORF22715 - 2.3 8.4 8.6 4 7.6 0.2 3.3 2 1 1 3 3 3 0 Basic region leucine zipper DivIC PF04977.15 ORF22715 - 7.9 6.3 12.3 0.15 11.8 1.6 2.8 3 0 0 3 3 3 0 Septum formation initiator Ank_4 PF13637.6 ORF21571 - 2.8e-08 34.1 0.0 6.2e-08 33.0 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF21571 - 1.9e-07 31.6 0.0 3.5e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF21571 - 1.1e-06 28.8 0.2 0.0074 16.7 0.1 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF21571 - 1.2e-06 28.4 0.1 0.0036 17.7 0.1 2.8 2 0 0 2 2 2 2 Ankyrin repeat SH3_3 PF08239.11 ORF21571 - 0.001 19.3 0.1 0.0021 18.3 0.1 1.5 1 0 0 1 1 1 1 Bacterial SH3 domain Ank_5 PF13857.6 ORF21571 - 0.049 14.0 0.3 0.24 11.8 0.5 2.1 2 1 1 3 3 3 0 Ankyrin repeats (many copies) Stirrup PF09061.6 ORF21571 - 0.1 12.8 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Stirrup Abhydrolase_1 PF00561.20 ORF19722 - 1.5e-30 106.7 0.0 2.2e-30 106.1 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF19722 - 3.9e-11 42.7 0.1 5e-11 42.3 0.1 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2048 PF09752.9 ORF19722 - 0.00022 20.4 0.0 0.29 10.2 0.0 2.1 2 0 0 2 2 2 2 Abhydrolase domain containing 18 Peptidase_S9 PF00326.21 ORF19722 - 0.032 13.7 0.2 3.8 6.9 0.0 2.4 2 1 0 2 2 2 0 Prolyl oligopeptidase family CTP-dep_RFKase PF01982.16 ORF19722 - 0.045 13.8 0.0 0.13 12.4 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function DUF120 ADP_ribosyl_GH PF03747.14 ORF16850 - 4e-19 69.4 0.0 5.3e-19 69.0 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase zf-CpG_bind_C PF12269.8 ORF15996 - 0.21 11.3 5.4 0.041 13.7 1.3 1.8 2 0 0 2 2 2 0 CpG binding protein zinc finger C terminal domain TssO PF17561.2 ORF15996 - 0.75 9.9 6.7 0.14 12.2 2.5 2.0 2 0 0 2 2 2 0 Type VI secretion system, TssO GTP1_OBG PF01018.22 ORF14651 - 7.3e-26 90.6 2.3 1.1e-25 90.0 2.3 1.2 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 ORF14651 - 4.4e-21 75.1 0.0 6.4e-21 74.6 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF14651 - 2.7e-08 33.5 0.0 4.3e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B ATP_bind_1 PF03029.17 ORF14651 - 0.00075 19.4 0.0 0.98 9.1 0.0 2.2 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 ORF14651 - 0.0017 18.5 0.0 0.42 10.7 0.0 2.2 1 1 1 2 2 2 2 Dynamin family Arf PF00025.21 ORF14651 - 0.0025 17.3 0.0 0.01 15.3 0.0 1.8 1 1 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF14651 - 0.13 11.8 0.0 2.9 7.4 0.0 2.1 1 1 0 2 2 2 0 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF14651 - 0.24 10.8 0.0 0.36 10.3 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit S-AdoMet_synt_C PF02773.16 ORF14246 - 3.7e-62 208.4 0.1 7.9e-62 207.3 0.0 1.6 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 ORF14246 - 1.5e-39 134.9 0.1 4.1e-39 133.5 0.0 1.7 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 ORF14246 - 3.2e-07 30.9 0.1 7.4e-07 29.8 0.1 1.6 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain DUF3654 PF12376.8 ORF14246 - 0.045 13.9 0.4 0.16 12.1 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3654) aGPT-Pplase1 PF18723.1 ORF10852 - 0.13 11.6 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 1 zf-CpG_bind_C PF12269.8 ORF104438 - 0.21 11.3 5.4 0.041 13.7 1.3 1.8 2 0 0 2 2 2 0 CpG binding protein zinc finger C terminal domain TssO PF17561.2 ORF104438 - 0.75 9.9 6.7 0.14 12.2 2.5 2.0 2 0 0 2 2 2 0 Type VI secretion system, TssO HGD-D PF06050.13 ORF104367 - 1.9e-72 244.8 1.1 2.1e-71 241.3 1.1 1.9 1 1 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component Kelch_4 PF13418.6 ORF104279 - 5.4e-12 45.5 5.0 0.0026 17.8 0.0 5.6 5 1 0 5 5 5 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF104279 - 2.5e-08 33.7 2.4 0.01 15.8 0.0 4.2 4 0 0 4 4 4 3 Kelch motif Kelch_1 PF01344.25 ORF104279 - 7.1e-08 31.9 1.8 0.053 13.1 0.0 4.2 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 ORF104279 - 1.1e-07 32.0 2.9 0.66 10.3 0.0 5.4 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF104279 - 6.1e-07 29.5 1.7 1.8 9.0 0.1 4.8 4 1 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 ORF104279 - 0.0044 16.9 5.4 3.1 7.9 0.0 4.5 5 0 0 5 5 5 2 Kelch motif His_Phos_2 PF00328.22 NODE_18938_length_1015_cov_3.318367_g14465_i0reverse_frame_1 - 1.2e-05 24.8 1.0 1.5e-05 24.6 1.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Acetyltransf_6 PF13480.7 ORF98527 - 0.08 13.1 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Form_Nir_trans PF01226.17 ORF91590 - 7.9e-70 234.9 20.9 1.1e-69 234.4 20.9 1.2 1 0 0 1 1 1 1 Formate/nitrite transporter Fumble PF03630.14 ORF89800 - 2.6e-54 184.6 1.4 3e-54 184.4 1.4 1.0 1 0 0 1 1 1 1 Fumble Sld5 PF05916.11 ORF89800 - 0.12 12.8 0.0 11 6.5 0.0 2.4 2 1 0 2 2 2 0 GINS complex protein adh_short PF00106.25 ORF87562 - 5.9e-32 110.7 0.0 7.7e-32 110.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF87562 - 4.9e-14 52.5 0.0 6.4e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF87562 - 2.6e-06 27.5 0.2 8.6e-06 25.8 0.2 1.8 1 1 0 1 1 1 1 KR domain GP120 PF00516.18 ORF87562 - 0.0089 14.7 0.0 0.012 14.3 0.0 1.1 1 0 0 1 1 1 1 Envelope glycoprotein GP120 Polysacc_synt_2 PF02719.15 ORF87562 - 0.022 13.9 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 3HCDH_N PF02737.18 ORF87562 - 0.036 13.9 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BTB PF00651.31 ORF85565 - 1.9e-06 28.1 0.0 3.8e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain UL97 PF06734.12 ORF85565 - 0.15 11.9 0.1 0.24 11.3 0.1 1.3 1 0 0 1 1 1 0 UL97 Lig_chan PF00060.26 ORF85363 - 7.4e-07 29.1 0.1 1.1e-06 28.5 0.1 1.3 1 0 0 1 1 1 1 Ligand-gated ion channel PPR_2 PF13041.6 ORF85072 - 1.6e-08 34.6 0.0 0.0011 19.1 0.0 4.3 5 1 1 6 6 6 2 PPR repeat family PPR_3 PF13812.6 ORF85072 - 8.3e-05 22.6 0.0 0.16 12.1 0.0 3.5 4 0 0 4 4 4 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF85072 - 0.012 15.3 0.0 0.33 10.7 0.0 3.1 3 0 0 3 3 3 0 PPR repeat PPR PF01535.20 ORF85072 - 0.025 14.8 0.0 0.94 9.9 0.0 3.2 3 0 0 3 3 3 0 PPR repeat COX1 PF00115.20 ORF8451 - 5.8e-78 262.7 35.7 6.9e-78 262.4 35.7 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Asp_protease_2 PF13650.6 ORF81475 - 5e-09 36.7 3.1 1.6e-05 25.4 0.0 3.2 3 1 0 3 3 3 2 Aspartyl protease gag-asp_proteas PF13975.6 ORF81475 - 7.7e-06 26.4 0.8 0.00064 20.2 0.0 2.9 3 0 0 3 3 3 1 gag-polyprotein putative aspartyl protease RVP PF00077.20 ORF81475 - 0.0017 18.6 0.1 0.2 12.0 0.0 3.2 3 0 0 3 3 3 1 Retroviral aspartyl protease Nbl1_Borealin_N PF10444.9 ORF81475 - 0.042 13.5 0.0 0.094 12.4 0.0 1.5 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Pkinase PF00069.25 ORF64726 - 1.6e-75 253.9 0.0 1.9e-75 253.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF64726 - 5e-38 130.9 0.0 6.4e-38 130.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF64726 - 0.0016 17.3 0.0 0.0029 16.5 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF64726 - 0.0083 15.1 0.2 0.012 14.6 0.2 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF64726 - 0.01 15.2 0.0 0.018 14.4 0.0 1.4 1 0 0 1 1 1 0 Kinase-like Pkinase_C PF00433.24 ORF64726 - 0.014 16.0 2.2 0.014 16.0 2.2 2.4 2 0 0 2 2 2 0 Protein kinase C terminal domain FTA2 PF13095.6 ORF64726 - 0.028 14.0 0.3 7.3 6.2 0.1 2.2 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Anoct_dimer PF16178.5 ORF64726 - 0.054 13.2 0.4 0.084 12.6 0.4 1.2 1 0 0 1 1 1 0 Dimerisation domain of Ca+-activated chloride-channel, anoctamin Kdo PF06293.14 ORF64726 - 0.062 12.6 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF64726 - 0.08 12.0 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 DnaJ_C PF01556.18 ORF6383 - 1.1e-26 93.7 6.9 1.1e-24 87.2 6.9 2.4 1 1 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 ORF6383 - 7.4e-16 58.0 0.3 1.7e-15 56.9 0.3 1.7 1 0 0 1 1 1 1 DnaJ domain PGK PF00162.19 ORF58719 - 5.1e-114 381.1 1.3 5.7e-114 381.0 1.3 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF58719 - 0.11 12.1 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) COX1 PF00115.20 ORF573 - 5.8e-78 262.7 35.7 6.9e-78 262.4 35.7 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Peripla_BP_3 PF13377.6 ORF55186 - 3.6e-34 118.5 0.0 8.7e-34 117.2 0.0 1.7 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF55186 - 1.2e-25 90.6 0.1 1.4e-25 90.2 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 ORF55186 - 1e-21 76.4 0.2 1.9e-21 75.6 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 ORF55186 - 2.1e-18 66.8 0.0 3.7e-18 66.0 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_38 PF13936.6 ORF55186 - 0.00051 19.8 0.3 0.29 10.9 0.0 2.9 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_3 PF01381.22 ORF55186 - 0.00095 19.2 0.0 0.002 18.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 ORF55186 - 0.0011 19.2 0.0 0.0029 17.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain TetR_N PF00440.23 ORF55186 - 0.0021 17.8 0.1 0.0087 15.8 0.1 2.1 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_ISL3 PF13542.6 ORF55186 - 0.055 12.9 0.3 0.44 10.0 0.1 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_IclR PF09339.10 ORF55186 - 0.082 12.7 0.0 0.22 11.4 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_7 PF02796.15 ORF55186 - 0.096 12.8 0.1 0.78 9.9 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain of resolvase Acetyltransf_6 PF13480.7 ORF54155 - 0.08 13.1 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DDE_Tnp_1_7 PF13843.6 ORF49450 - 0.029 13.7 0.1 0.046 13.0 0.1 1.2 1 0 0 1 1 1 0 Transposase IS4 Apolipoprotein PF01442.18 ORF49450 - 0.03 14.2 14.4 0.091 12.6 13.7 2.1 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain DUF3584 PF12128.8 ORF49450 - 0.11 10.0 11.0 0.11 10.0 10.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Baculo_PEP_C PF04513.12 ORF49450 - 0.18 11.8 0.4 21 5.2 0.3 2.9 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus HTH_37 PF13744.6 ORF49450 - 0.37 10.8 4.8 0.6 10.1 1.5 2.9 2 1 1 3 3 3 0 Helix-turn-helix domain Exonuc_VII_L PF02601.15 ORF49450 - 0.61 9.6 7.5 1 8.8 7.5 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit Fzo_mitofusin PF04799.13 ORF49450 - 0.63 9.6 4.2 1.2 8.7 2.4 2.3 1 1 1 2 2 2 0 fzo-like conserved region FUSC PF04632.12 ORF49450 - 1.7 7.1 12.1 2.4 6.6 12.1 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family LAGLIDADG_3 PF14528.6 ORF42766 - 4.2e-06 27.0 0.4 0.053 13.8 0.0 2.9 3 0 0 3 3 3 2 LAGLIDADG-like domain Hom_end PF05204.14 ORF42766 - 0.00032 20.9 0.0 0.16 12.2 0.0 2.5 2 0 0 2 2 2 2 Homing endonuclease LAGLIDADG_1 PF00961.19 ORF42766 - 0.00065 20.6 0.0 0.15 13.0 0.0 2.8 3 0 0 3 3 3 1 LAGLIDADG endonuclease LAGLIDADG_WhiA PF14527.6 ORF42766 - 0.12 12.5 0.1 0.65 10.1 0.0 2.3 2 1 0 2 2 2 0 WhiA LAGLIDADG-like domain zf-NF-X1 PF01422.17 ORF41630 - 0.39 10.8 30.7 2 8.5 6.4 2.9 2 1 0 2 2 2 0 NF-X1 type zinc finger adh_short PF00106.25 ORF3889 - 2.5e-31 108.7 0.0 3.2e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF3889 - 1.7e-14 53.9 0.0 2.2e-14 53.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF3889 - 4e-05 23.6 0.0 9.3e-05 22.4 0.0 1.6 1 1 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF3889 - 0.033 14.1 0.0 0.053 13.4 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RtcR PF06956.11 ORF3889 - 0.16 11.4 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase zf-RING_2 PF13639.6 ORF36629 - 2.5e-11 43.7 5.4 4.2e-11 43.0 5.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF36629 - 6.9e-10 38.6 6.0 1.2e-09 37.8 6.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF36629 - 3.2e-08 33.2 1.7 7.6e-08 32.0 1.7 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF36629 - 1.6e-07 31.1 6.0 2.8e-07 30.3 6.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF36629 - 5e-07 29.6 4.8 8.5e-07 28.8 4.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF36629 - 3.6e-06 27.2 5.8 9.8e-06 25.8 5.8 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF36629 - 4.8e-06 26.5 4.5 9.7e-06 25.5 4.5 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF36629 - 0.00017 21.4 6.7 0.00032 20.5 6.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF36629 - 0.00032 20.5 8.3 0.024 14.5 8.9 2.3 1 1 1 2 2 2 2 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF36629 - 0.24 11.1 4.6 0.47 10.1 4.6 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Rad50_zn_hook PF04423.14 ORF36629 - 0.44 10.4 8.1 0.63 9.9 0.7 3.2 3 0 0 3 3 3 0 Rad50 zinc hook motif zf-RING-like PF08746.11 ORF36629 - 0.55 10.6 5.8 1.1 9.6 5.8 1.6 1 1 0 1 1 1 0 RING-like domain zf-P11 PF03854.14 ORF36629 - 1.3 8.7 7.0 6.4 6.5 6.3 2.3 2 1 0 2 2 2 0 P-11 zinc finger UIM PF02809.20 ORF36629 - 7.9 6.7 11.6 0.52 10.4 4.5 2.6 2 0 0 2 2 2 0 Ubiquitin interaction motif PhyH PF05721.13 ORF34151 - 0.00013 22.3 0.0 0.044 14.0 0.0 2.3 2 0 0 2 2 2 2 Phytanoyl-CoA dioxygenase (PhyH) CENP-F_C_Rb_bdg PF10490.9 ORF34151 - 0.048 13.1 0.0 0.26 10.7 0.0 2.1 2 0 0 2 2 2 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 TruD PF01142.18 ORF33770 - 1.3e-11 44.0 0.0 1.7e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) KdgT PF03812.13 ORF32887 - 2.1e-112 375.4 29.9 2.4e-112 375.2 29.9 1.0 1 0 0 1 1 1 1 2-keto-3-deoxygluconate permease UPF0182 PF03699.13 ORF26249 - 0.11 10.5 0.8 0.12 10.4 0.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) KdpC PF02669.15 ORF26249 - 0.2 11.5 0.1 0.34 10.7 0.1 1.3 1 0 0 1 1 1 0 K+-transporting ATPase, c chain TatC PF00902.18 ORF26249 - 0.52 10.1 9.8 1.1 9.0 9.8 1.5 1 1 0 1 1 1 0 Sec-independent protein translocase protein (TatC) OpuAC PF04069.12 ORF22310 - 4.7e-27 95.2 2.2 7e-27 94.6 2.2 1.2 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system NMT1_2 PF13379.6 ORF22310 - 5e-21 75.5 3.1 1e-20 74.5 3.1 1.5 1 1 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 ORF22310 - 4e-18 66.2 0.0 5.8e-18 65.6 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 ORF22310 - 1.2e-07 31.5 0.2 1.9e-07 30.9 0.2 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Ribosomal_L1 PF00687.21 ORF20908 - 1.4e-37 129.4 2.2 2.1e-37 128.8 1.0 1.8 1 1 1 2 2 2 1 Ribosomal protein L1p/L10e family Complex1_LYR_2 PF13233.6 ORF20908 - 0.48 11.2 9.0 0.29 11.9 5.6 2.3 2 0 0 2 2 2 0 Complex1_LYR-like DUF4337 PF14235.6 ORF20908 - 2 8.5 7.9 3.8 7.6 7.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) COX1 PF00115.20 ORF1756 - 5.8e-78 262.7 35.7 6.9e-78 262.4 35.7 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I PhyH PF05721.13 ORF16059 - 2.5e-49 168.4 0.0 3.3e-49 168.0 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) RSN1_7TM PF02714.15 ORF1292 - 3.9e-37 128.1 18.8 4.5e-37 127.8 18.8 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate FA_desaturase PF00487.24 ORF12499 - 3.9e-21 76.0 3.6 3.9e-21 76.0 3.6 1.5 2 0 0 2 2 2 1 Fatty acid desaturase GFA PF04828.14 ORF111912 - 6.5e-05 23.2 2.0 0.3 11.4 0.1 3.4 4 0 0 4 4 4 2 Glutathione-dependent formaldehyde-activating enzyme DZR PF12773.7 ORF111912 - 0.0018 18.3 6.4 0.44 10.6 0.7 2.7 2 0 0 2 2 2 2 Double zinc ribbon Tgi2PP PF18250.1 ORF111912 - 0.089 13.0 0.0 24 5.2 0.0 2.5 2 0 0 2 2 2 0 Effector immunity protein Tgi2PP SBF2 PF12335.8 ORF111912 - 0.25 10.9 0.0 26 4.3 0.0 2.1 2 0 0 2 2 2 0 Myotubularin protein PHD_Oberon PF07227.11 ORF111912 - 0.33 10.8 6.9 3.8 7.4 0.8 2.2 2 0 0 2 2 2 0 PHD - plant homeodomain finger protein RPA_interact_C PF14768.6 ORF111912 - 0.56 10.8 4.5 15 6.2 0.4 2.3 2 0 0 2 2 2 0 Replication protein A interacting C-terminal GAT PF03127.14 ORF111864 - 0.0044 17.3 0.4 0.0044 17.3 0.4 2.6 3 0 0 3 3 3 1 GAT domain UbiA PF01040.18 ORF105838 - 1.3e-29 103.3 20.3 1.3e-29 103.3 20.3 1.8 1 1 0 1 1 1 1 UbiA prenyltransferase family ExoD PF06055.12 ORF105838 - 2.7 7.4 12.9 0.046 13.1 1.4 2.8 2 1 0 2 2 2 0 Exopolysaccharide synthesis, ExoD Toxin-deaminase PF14424.6 ORF105205 - 0.1 12.7 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 The BURPS668_1122 family of deaminases SNAD4 PF18750.1 ORF105205 - 0.16 12.1 2.2 0.24 11.5 1.4 1.7 1 1 1 2 2 2 0 Secreted Novel AID/APOBEC-like Deaminase 4 NAD_Gly3P_dh_C PF07479.14 ORF100973 - 3.4e-53 179.8 1.0 5.8e-53 179.0 1.0 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 ORF100973 - 2.2e-50 170.7 0.0 3.1e-50 170.2 0.0 1.2 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 ORF100973 - 7.2e-11 41.9 0.0 1.3e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 ORF100973 - 3e-06 27.7 0.0 6.7e-05 23.4 0.0 2.5 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 ORF100973 - 4.5e-05 23.7 0.0 0.00013 22.2 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 ORF100973 - 0.00015 21.4 0.0 0.0013 18.3 0.0 2.3 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIDA PF01134.22 ORF100973 - 0.00054 19.2 0.0 0.00096 18.3 0.0 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A 3HCDH_N PF02737.18 ORF100973 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rossmann-like PF10727.9 ORF100973 - 0.0036 17.2 0.2 0.012 15.4 0.1 2.0 1 1 0 1 1 1 1 Rossmann-like domain NAD_binding_8 PF13450.6 ORF100973 - 0.004 17.3 0.1 0.013 15.7 0.1 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 ORF100973 - 0.0042 17.3 0.0 0.015 15.6 0.0 2.0 2 0 0 2 2 2 1 TrkA-N domain Pyr_redox_2 PF07992.14 ORF100973 - 0.0059 15.9 0.0 0.011 14.9 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase IlvN PF07991.12 ORF100973 - 0.051 13.1 0.0 0.72 9.4 0.0 2.3 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Methyltransf_23 PF13489.6 ORF100973 - 0.088 12.6 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain LAGLIDADG_3 PF14528.6 ORF100973 - 0.11 12.8 0.0 5.9 7.3 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Glyco_transf_4 PF13439.6 ORF100973 - 0.12 12.3 0.0 0.25 11.3 0.0 1.6 1 0 0 1 1 1 0 Glycosyltransferase Family 4 NAD_binding_7 PF13241.6 ORF100973 - 0.17 12.3 0.0 4.8 7.7 0.0 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding FNIP PF05725.12 ORF100227 - 6.7e-28 96.6 21.6 1.7e-08 34.5 0.6 5.5 4 2 1 5 5 5 5 FNIP Repeat LRR_5 PF13306.6 ORF100227 - 5.3e-07 29.7 0.0 0.00046 20.1 0.0 2.4 1 1 1 2 2 2 2 BspA type Leucine rich repeat region (6 copies) Molybdopterin PF00384.22 NODE_19004_length_1013_cov_2.496933_g14517_i0forward_frame_1 - 4.5e-78 263.1 0.0 5e-78 263.0 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks40.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks40.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks40.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks40.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:07:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NICE-1 PF15845.5 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 0.38 11.6 5.7 0.6 10.9 5.7 1.3 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family Mito_fiss_reg PF05308.11 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 0.62 10.1 3.1 0.6 10.1 3.1 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator DEC-1_N PF04625.13 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 1.2 8.1 7.3 1.1 8.2 7.3 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region CAP_N PF01213.19 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 1.3 8.5 4.7 1.3 8.5 4.7 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Glycoprotein PF03409.15 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 5.8 5.7 6.6 5.8 5.7 6.6 1.0 1 0 0 1 1 1 0 Transmembrane glycoprotein ACAS_N PF16177.5 NODE_89067_length_181_cov_1.349315_g81126_i0reverse_frame_1 - 0.26 11.2 5.7 0.15 12.0 3.6 1.7 1 1 1 2 2 2 0 Acetyl-coenzyme A synthetase N-terminus SRP19 PF01922.17 NODE_89063_length_181_cov_1.349315_g81122_i0reverse_frame_1 - 0.0067 17.3 0.0 0.0074 17.2 0.0 1.0 1 0 0 1 1 1 1 SRP19 protein DUF4506 PF14958.6 NODE_89058_length_181_cov_1.363014_g81117_i0reverse_frame_1 - 0.13 11.8 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4506) DSPc PF00782.20 NODE_89051_length_181_cov_1.369863_g81110_i0reverse_frame_1 - 4e-11 42.9 0.1 4.5e-11 42.7 0.1 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_89051_length_181_cov_1.369863_g81110_i0reverse_frame_1 - 0.0033 17.0 0.0 0.0037 16.9 0.0 1.0 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PET10 PF17316.2 NODE_89047_length_181_cov_1.369863_g81106_i0forward_frame_1 - 0.056 13.0 0.5 0.055 13.0 0.5 1.0 1 0 0 1 1 1 0 Petite colonies protein 10 Ank_2 PF12796.7 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 1.4e-05 25.6 0.1 2.1e-05 25.0 0.1 1.3 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 8.2e-05 22.9 1.2 0.017 15.5 0.4 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 0.00019 21.6 0.3 0.073 13.4 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 0.00026 21.2 0.2 0.097 13.3 0.1 2.3 2 1 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 0.0003 21.3 0.7 0.0022 18.5 0.7 1.9 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Cyclotide PF03784.13 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 0.17 12.0 2.5 0.45 10.6 0.1 2.4 3 0 0 3 3 3 0 Cyclotide family DUF4844 PF16133.5 NODE_89042_length_181_cov_1.369863_g81101_i0reverse_frame_1 - 0.012 16.1 0.4 0.013 16.0 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4844) Pox_E10 PF04805.12 NODE_89040_length_181_cov_1.369863_g81099_i0forward_frame_1 - 0.079 12.8 0.6 0.094 12.6 0.6 1.2 1 0 0 1 1 1 0 E10-like protein conserved region Phage_FRD3 PF05798.11 NODE_89039_length_181_cov_1.383562_g81098_i0forward_frame_1 - 0.049 13.9 0.0 0.056 13.7 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage FRD3 protein PDDEXK_5 PF11645.8 NODE_89034_length_181_cov_1.397260_g81093_i0reverse_frame_1 - 0.042 13.8 0.2 0.05 13.6 0.2 1.2 1 0 0 1 1 1 0 PD-(D/E)XK endonuclease ubiquitin PF00240.23 NODE_89028_length_181_cov_1.404110_g81087_i0reverse_frame_1 - 0.00059 19.5 0.3 0.23 11.2 0.1 2.1 2 0 0 2 2 2 2 Ubiquitin family p47_phox_C PF08944.11 NODE_89013_length_181_cov_1.486301_g81072_i0forward_frame_1 - 0.14 11.6 0.4 0.2 11.1 0.4 1.2 1 0 0 1 1 1 0 NADPH oxidase subunit p47Phox, C terminal domain DUF1087 PF06465.13 NODE_89003_length_181_cov_1.527397_g81062_i0reverse_frame_1 - 0.043 13.9 0.0 0.054 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) Glyco_transf_20 PF00982.21 NODE_89000_length_181_cov_1.534247_g81059_i0forward_frame_1 - 3.3e-10 39.2 0.0 3.5e-10 39.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 UL41A PF17591.2 NODE_88987_length_181_cov_1.575342_g81046_i0forward_frame_1 - 0.53 10.4 4.1 0.68 10.1 4.1 1.2 1 0 0 1 1 1 0 Herpesvirus UL41A Actin PF00022.19 NODE_88983_length_181_cov_1.602740_g81042_i0reverse_frame_1 - 2.9e-10 39.3 0.1 3e-10 39.3 0.1 1.0 1 0 0 1 1 1 1 Actin ALP_N PF17989.1 NODE_88983_length_181_cov_1.602740_g81042_i0reverse_frame_1 - 0.082 13.1 0.0 0.091 12.9 0.0 1.1 1 0 0 1 1 1 0 Actin like proteins N terminal domain HTH_25 PF13413.6 NODE_88973_length_181_cov_1.623288_g81032_i0forward_frame_1 - 0.098 12.5 0.0 1 9.3 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain SPATA9 PF15824.5 NODE_88960_length_181_cov_1.636986_g81019_i0forward_frame_1 - 0.35 10.1 1.6 0.36 10.1 1.6 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 9 Tail_VII PF17091.5 NODE_88957_length_181_cov_1.636986_g81016_i0forward_frame_1 - 0.062 13.2 0.2 0.097 12.6 0.2 1.3 1 0 0 1 1 1 0 Inovirus G7P protein FGAR-AT_linker PF18072.1 NODE_88947_length_181_cov_1.643836_g81006_i0reverse_frame_1 - 0.19 12.3 1.0 0.26 11.9 1.0 1.6 1 1 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase linker domain PsiF_repeat PF07769.14 NODE_88944_length_181_cov_1.643836_g81003_i0forward_frame_1 - 0.067 13.1 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 psiF repeat Hormone_5 PF00184.17 NODE_88941_length_181_cov_1.643836_g81000_i0reverse_frame_1 - 0.1 13.5 5.1 0.11 13.3 5.1 1.1 1 0 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain KIX_2 PF16987.5 NODE_88933_length_181_cov_1.657534_g80992_i0reverse_frame_1 - 0.015 15.3 0.1 0.017 15.1 0.1 1.1 1 0 0 1 1 1 0 KIX domain IFT57 PF10498.9 NODE_88933_length_181_cov_1.657534_g80992_i0reverse_frame_1 - 0.032 13.2 0.1 0.035 13.1 0.1 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Borrelia_REV PF03978.13 NODE_88933_length_181_cov_1.657534_g80992_i0reverse_frame_1 - 0.075 13.0 0.1 0.088 12.8 0.1 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi REV protein SWIRM-assoc_2 PF16496.5 NODE_88931_length_181_cov_1.664384_g80990_i0reverse_frame_1 - 0.075 11.9 6.0 0.071 12.0 6.0 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal RRXRR PF14239.6 NODE_88925_length_181_cov_1.684932_g80984_i0reverse_frame_1 - 0.095 12.6 4.6 0.1 12.4 4.6 1.1 1 0 0 1 1 1 0 RRXRR protein ANF_receptor PF01094.28 NODE_88920_length_181_cov_1.705479_g80979_i0reverse_frame_1 - 0.028 13.5 0.2 0.031 13.4 0.2 1.0 1 0 0 1 1 1 0 Receptor family ligand binding region DUF2526 PF10735.9 NODE_88913_length_181_cov_1.732877_g80972_i0reverse_frame_1 - 9.3e-15 54.6 3.7 1.1e-14 54.3 3.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2526) ABC_tran PF00005.27 NODE_88910_length_181_cov_1.746575_g80969_i0forward_frame_1 - 9.8e-09 35.8 0.0 1.1e-08 35.7 0.0 1.0 1 0 0 1 1 1 1 ABC transporter Sdh5 PF03937.16 NODE_88907_length_181_cov_1.767123_g80966_i0forward_frame_1 - 0.045 13.7 0.1 0.064 13.2 0.1 1.2 1 0 0 1 1 1 0 Flavinator of succinate dehydrogenase ubiquitin PF00240.23 NODE_88895_length_181_cov_1.808219_g80954_i0forward_frame_1 - 0.0022 17.7 0.0 0.003 17.3 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family CASP_C PF08172.12 NODE_88888_length_181_cov_1.842466_g80947_i0forward_frame_1 - 0.066 12.5 0.0 0.067 12.5 0.0 1.0 1 0 0 1 1 1 0 CASP C terminal MqsA_antitoxin PF15731.5 NODE_88881_length_181_cov_1.890411_g80940_i0reverse_frame_1 - 0.043 13.9 0.0 0.047 13.8 0.0 1.0 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Interferon PF00143.19 NODE_88868_length_181_cov_1.938356_g80927_i0reverse_frame_1 - 0.03 14.5 0.0 0.03 14.5 0.0 1.0 1 0 0 1 1 1 0 Interferon alpha/beta domain Rax2 PF12768.7 NODE_88864_length_181_cov_1.972603_g80923_i0forward_frame_1 - 0.2 11.1 0.3 0.22 11.0 0.3 1.0 1 0 0 1 1 1 0 Cortical protein marker for cell polarity DUF4234 PF14018.6 NODE_88858_length_181_cov_2.054795_g80917_i0forward_frame_1 - 0.037 14.2 0.1 0.079 13.1 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4234) TMEM154 PF15102.6 NODE_88855_length_181_cov_2.116438_g80914_i0forward_frame_1 - 0.0011 18.8 1.1 0.0013 18.7 1.1 1.0 1 0 0 1 1 1 1 TMEM154 protein family DUF4064 PF13273.6 NODE_88855_length_181_cov_2.116438_g80914_i0forward_frame_1 - 0.0042 17.4 0.6 0.0047 17.2 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) Podoplanin PF05808.11 NODE_88855_length_181_cov_2.116438_g80914_i0forward_frame_1 - 0.008 16.3 1.2 0.0092 16.1 1.2 1.1 1 0 0 1 1 1 1 Podoplanin EssA PF10661.9 NODE_88855_length_181_cov_2.116438_g80914_i0forward_frame_1 - 0.016 15.0 1.1 0.019 14.8 1.1 1.0 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA PRA1 PF03208.19 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 0.39 10.3 11.6 0.41 10.3 11.6 1.0 1 0 0 1 1 1 0 PRA1 family protein DUF2207 PF09972.9 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 0.56 8.9 4.1 0.56 8.9 4.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1700 PF08006.11 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 0.67 9.5 8.7 0.6 9.6 8.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF1129 PF06570.11 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 1.4 8.3 5.8 1.4 8.3 5.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Mid2 PF04478.12 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 2.1 8.1 6.1 2.7 7.8 6.1 1.3 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor UL45 PF05473.12 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 2.2 7.9 5.6 2.4 7.7 5.6 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF3040 PF11239.8 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 2.3 8.6 15.9 2.8 8.3 15.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF4231 PF14015.6 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 2.6 8.5 7.7 2.9 8.4 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) Amnionless PF14828.6 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 3.4 6.4 7.0 4.5 6.0 7.0 1.3 1 0 0 1 1 1 0 Amnionless DUF3966 PF13110.6 NODE_88838_length_181_cov_2.205479_g80897_i0forward_frame_1 - 0.13 12.2 0.5 0.64 10.0 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3966) TIG_plexin PF17960.1 NODE_88831_length_181_cov_2.301370_g80890_i0forward_frame_1 - 0.01 15.8 0.4 0.011 15.7 0.4 1.2 1 0 0 1 1 1 0 TIG domain Nodulin_late PF07127.11 NODE_88828_length_181_cov_2.321918_g80887_i0forward_frame_1 - 0.078 13.3 0.3 0.11 12.9 0.3 1.3 1 0 0 1 1 1 0 Late nodulin protein DUF3460 PF11943.8 NODE_88823_length_181_cov_2.376712_g80882_i0reverse_frame_1 - 0.084 13.1 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3460) DsbB PF02600.16 NODE_88822_length_181_cov_2.383562_g80881_i0reverse_frame_1 - 3.5e-13 50.2 2.9 3.7e-13 50.2 2.9 1.0 1 0 0 1 1 1 1 Disulfide bond formation protein DsbB MraZ PF02381.18 NODE_88818_length_181_cov_2.438356_g80877_i0forward_frame_1 - 1.7e-15 56.8 0.0 1.9e-15 56.6 0.0 1.0 1 0 0 1 1 1 1 MraZ protein, putative antitoxin-like CAP PF00188.26 NODE_88807_length_181_cov_2.616438_g80866_i0forward_frame_1 - 0.08 13.8 0.0 0.08 13.8 0.0 1.1 1 0 0 1 1 1 0 Cysteine-rich secretory protein family Cad PF03596.13 NODE_88788_length_181_cov_2.938356_g80847_i0forward_frame_1 - 0.029 14.3 1.9 0.028 14.3 1.9 1.1 1 0 0 1 1 1 0 Cadmium resistance transporter Lipase_3 PF01764.25 NODE_88786_length_181_cov_3.068493_g80845_i0reverse_frame_1 - 7.7e-12 45.3 0.0 8.2e-12 45.2 0.0 1.0 1 0 0 1 1 1 1 Lipase (class 3) DUF676 PF05057.14 NODE_88786_length_181_cov_3.068493_g80845_i0reverse_frame_1 - 0.0058 16.2 0.1 0.0062 16.1 0.1 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_88786_length_181_cov_3.068493_g80845_i0reverse_frame_1 - 0.0064 16.2 0.0 0.0066 16.2 0.0 1.0 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 NODE_88786_length_181_cov_3.068493_g80845_i0reverse_frame_1 - 0.1 12.5 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF3285 PF11688.8 NODE_88776_length_181_cov_3.335616_g80835_i0forward_frame_1 - 0.062 13.2 0.7 0.15 12.0 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3285) DUF1509 PF07420.11 NODE_88773_length_181_cov_3.424658_g80832_i0forward_frame_1 - 0.3 10.0 1.6 0.31 10.0 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) LrgB PF04172.16 NODE_88771_length_181_cov_3.568493_g80830_i0reverse_frame_1 - 3e-20 72.7 0.7 3.1e-20 72.6 0.7 1.0 1 0 0 1 1 1 1 LrgB-like family BssB_TutG PF18512.1 NODE_88759_length_181_cov_8.363014_g80818_i0reverse_frame_1 - 0.078 12.9 0.0 0.091 12.7 0.0 1.3 1 0 0 1 1 1 0 Benzylsuccinate synthase beta subunit HnRNP_M PF11532.8 NODE_88756_length_181_cov_13.554795_g80815_i0reverse_frame_1 - 1.1 9.6 6.9 1.6 9.0 6.9 1.3 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein M DUF4820 PF16091.5 NODE_88754_length_181_cov_14.815068_g80813_i0forward_frame_1 - 0.13 11.6 1.3 0.13 11.6 1.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) COX6C PF02937.15 NODE_88749_length_181_cov_18.671233_g80808_i0forward_frame_1 - 0.012 15.7 0.1 0.016 15.3 0.1 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc SesA PF17107.5 NODE_88739_length_181_cov_23.698630_g80798_i0reverse_frame_1 - 0.039 14.1 0.1 0.042 14.0 0.1 1.0 1 0 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases SR-25 PF10500.9 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 0.11 12.1 19.2 0.1 12.2 19.2 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Conotoxin PF02950.17 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 0.64 11.1 4.4 0.78 10.8 4.4 1.3 1 0 0 1 1 1 0 Conotoxin Med19 PF10278.9 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 1.6 8.6 15.5 1.7 8.6 15.5 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Ferlin_C PF16165.5 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 3.3 7.6 10.4 3.5 7.6 10.4 1.1 1 0 0 1 1 1 0 Ferlin C-terminus Rrn6 PF10214.9 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 4.5 5.6 12.5 4.9 5.5 12.5 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor CBP_BcsF PF11120.8 NODE_88736_length_181_cov_25.719178_g80795_i0reverse_frame_1 - 0.18 11.9 0.2 0.21 11.7 0.2 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF DUF3108 PF11306.8 NODE_88736_length_181_cov_25.719178_g80795_i0forward_frame_1 - 0.033 14.2 0.0 0.034 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3108) DUF1179 PF06678.11 NODE_88720_length_181_cov_35.630137_g80779_i0forward_frame_1 - 0.12 12.3 0.0 0.13 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1179) DUF3043 PF11241.8 NODE_88718_length_181_cov_38.554795_g80777_i0forward_frame_1 - 7.6 6.5 5.3 8.2 6.4 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) SLAC1 PF03595.17 NODE_88712_length_181_cov_42.904110_g80771_i0reverse_frame_1 - 0.22 10.8 7.1 0.24 10.6 7.1 1.0 1 0 0 1 1 1 0 Voltage-dependent anion channel Zn_ribbon_recom PF13408.6 NODE_88710_length_181_cov_44.671233_g80769_i0reverse_frame_1 - 0.0076 16.7 0.4 0.0076 16.7 0.4 1.9 1 1 1 2 2 2 1 Recombinase zinc beta ribbon domain APC_u14 PF16635.5 NODE_88708_length_181_cov_47.623288_g80767_i0forward_frame_1 - 0.036 14.6 0.0 0.04 14.5 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on APC between SAMP and APC_crr Mononeg_mRNAcap PF14318.6 NODE_88693_length_181_cov_89.287671_g80752_i0forward_frame_1 - 0.053 12.8 0.0 0.058 12.6 0.0 1.0 1 0 0 1 1 1 0 Mononegavirales mRNA-capping region V zf-RING-like PF08746.11 NODE_88681_length_181_cov_137.363014_g80740_i0forward_frame_1 - 0.78 10.1 6.4 0.31 11.4 3.7 1.7 2 0 0 2 2 2 0 RING-like domain AFP PF02420.15 NODE_88675_length_181_cov_172.027397_g80734_i0forward_frame_1 - 1.9 9.1 5.5 47 4.8 0.2 3.3 4 0 0 4 4 4 0 Insect antifreeze protein repeat Cys_knot PF00007.22 NODE_88673_length_181_cov_195.808219_g80732_i0reverse_frame_1 - 0.037 14.3 0.2 0.044 14.1 0.2 1.0 1 0 0 1 1 1 0 Cystine-knot domain DUF4202 PF13875.6 NODE_88673_length_181_cov_195.808219_g80732_i0reverse_frame_1 - 0.12 12.2 0.1 0.12 12.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4202) Chlam_PMP PF02415.17 NODE_88655_length_182_cov_0.816327_g80714_i0forward_frame_1 - 0.024 15.1 3.0 0.17 12.4 0.3 2.4 2 0 0 2 2 2 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat DUF3981 PF13139.6 NODE_88654_length_182_cov_0.816327_g80713_i0forward_frame_1 - 0.079 13.3 0.5 0.087 13.2 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3981) DUF2198 PF09964.9 NODE_88654_length_182_cov_0.816327_g80713_i0forward_frame_1 - 4.2 7.5 9.5 1 9.5 2.4 2.7 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2198) Period_C PF12114.8 NODE_88647_length_182_cov_0.870748_g80706_i0reverse_frame_1 - 1.9 8.1 9.3 1.9 8.0 9.3 1.0 1 0 0 1 1 1 0 Period protein 2/3C-terminal region DUF3352 PF11832.8 NODE_88647_length_182_cov_0.870748_g80706_i0forward_frame_1 - 0.13 10.9 1.8 0.14 10.8 1.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3352) DUF1490 PF07371.12 NODE_88645_length_182_cov_0.877551_g80704_i0forward_frame_1 - 0.11 12.6 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) PHA_synth_III_E PF09712.10 NODE_88644_length_182_cov_0.891156_g80703_i0forward_frame_1 - 0.15 11.1 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) Ketoacyl-synt_C PF02801.22 NODE_88641_length_182_cov_0.904762_g80700_i0reverse_frame_1 - 9.5e-13 48.2 0.0 1.1e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain TPR_8 PF13181.6 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 4e-05 23.5 1.4 0.00011 22.1 0.1 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 0.00025 20.7 0.0 0.00038 20.2 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 0.0009 19.2 0.0 0.0014 18.5 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 0.093 13.2 0.0 0.19 12.2 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 0.16 12.5 0.0 0.2 12.2 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat Keratin_B2 PF01500.17 NODE_88627_length_182_cov_1.020408_g80686_i0forward_frame_1 - 0.0056 16.7 0.1 0.0061 16.6 0.1 1.0 1 0 0 1 1 1 1 Keratin, high sulfur B2 protein Csm1_B PF18211.1 NODE_88607_length_182_cov_1.074830_g80666_i0reverse_frame_1 - 0.099 12.5 0.2 0.11 12.3 0.2 1.1 1 0 0 1 1 1 0 Csm1 subunit domain B zf_C2H2_ZHX PF18387.1 NODE_88607_length_182_cov_1.074830_g80666_i0reverse_frame_1 - 0.18 11.5 0.1 0.26 10.9 0.1 1.2 1 0 0 1 1 1 0 Zinc-fingers and homeoboxes C2H2 finger domain RRM_3 PF08777.11 NODE_88594_length_182_cov_1.081633_g80653_i0forward_frame_1 - 0.24 11.5 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 RNA binding motif AAA_assoc_C PF09821.9 NODE_88588_length_182_cov_1.081633_g80647_i0reverse_frame_1 - 0.057 14.0 0.1 0.072 13.6 0.1 1.0 1 0 0 1 1 1 0 C-terminal AAA-associated domain Med3 PF11593.8 NODE_88586_length_182_cov_1.081633_g80645_i0forward_frame_1 - 0.52 9.4 6.0 0.55 9.4 6.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Ntox17 PF15524.6 NODE_88584_length_182_cov_1.081633_g80643_i0forward_frame_1 - 0.1 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Novel toxin 17 DUF5126 PF17166.4 NODE_88577_length_182_cov_1.081633_g80636_i0forward_frame_1 - 0.12 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5126) DUF5549 PF17703.1 NODE_88571_length_182_cov_1.088435_g80630_i0reverse_frame_1 - 0.93 9.1 5.8 1 9.0 5.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) ABC2_membrane_2 PF12679.7 NODE_88561_length_182_cov_1.088435_g80620_i0reverse_frame_1 - 0.33 10.2 1.7 0.36 10.1 1.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein zf-C2HE PF16278.5 NODE_88559_length_182_cov_1.088435_g80618_i0reverse_frame_1 - 0.051 14.0 0.1 0.063 13.7 0.1 1.2 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger LCE PF14672.6 NODE_88559_length_182_cov_1.088435_g80618_i0forward_frame_1 - 0.032 14.8 1.1 0.041 14.5 1.1 1.2 1 0 0 1 1 1 0 Late cornified envelope Phage_holin_3_7 PF05449.11 NODE_88556_length_182_cov_1.088435_g80615_i0forward_frame_1 - 0.059 13.4 0.7 0.066 13.2 0.7 1.1 1 0 0 1 1 1 0 Putative 3TM holin, Phage_holin_3 VP4_2 PF08935.10 NODE_88550_length_182_cov_1.088435_g80609_i0reverse_frame_1 - 0.026 15.1 0.1 0.028 15.0 0.1 1.1 1 0 0 1 1 1 0 Viral protein VP4 subunit Sas6_CC PF18594.1 NODE_88547_length_182_cov_1.088435_g80606_i0reverse_frame_1 - 0.096 12.5 0.9 0.13 12.0 0.9 1.2 1 0 0 1 1 1 0 Sas6/XLF/XRCC4 coiled-coil domain FBPase_2 PF06874.11 NODE_88531_length_182_cov_1.088435_g80590_i0reverse_frame_1 - 0.021 13.2 0.3 0.022 13.1 0.3 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase EF-hand_7 PF13499.6 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 1.3e-08 35.1 1.0 1.4e-08 35.0 1.0 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 2.4e-08 32.9 1.5 5.4e-08 31.8 0.2 2.0 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 1.3e-07 31.0 0.2 2e-07 30.4 0.1 1.4 1 1 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 7.2e-05 22.6 1.3 0.00046 20.0 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 0.00013 21.3 0.1 0.00023 20.5 0.1 1.4 1 0 0 1 1 1 1 EF hand Caleosin PF05042.13 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 0.12 12.3 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Caleosin related protein TTD PF12148.8 NODE_88515_length_182_cov_1.088435_g80574_i0forward_frame_1 - 0.0069 16.3 0.0 0.0069 16.3 0.0 1.1 1 0 0 1 1 1 1 Tandem tudor domain within UHRF1 TetR PF13972.6 NODE_88502_length_182_cov_1.088435_g80561_i0forward_frame_1 - 0.039 13.7 0.4 0.043 13.5 0.4 1.0 1 0 0 1 1 1 0 Bacterial transcriptional repressor YwqJ-deaminase PF14431.6 NODE_88498_length_182_cov_1.088435_g80557_i0reverse_frame_1 - 0.076 13.2 0.7 0.081 13.1 0.7 1.2 1 0 0 1 1 1 0 YwqJ-like deaminase DUF5423 PF17461.2 NODE_88496_length_182_cov_1.102041_g80555_i0forward_frame_1 - 0.021 13.7 0.1 0.022 13.6 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5423) PrpF PF04303.13 NODE_88489_length_182_cov_1.136054_g80548_i0reverse_frame_1 - 0.11 11.5 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 PrpF protein Pardaxin PF07425.11 NODE_88485_length_182_cov_1.156463_g80544_i0reverse_frame_1 - 0.14 11.8 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Pardaxin DUF5102 PF17104.5 NODE_88468_length_182_cov_1.210884_g80527_i0reverse_frame_1 - 0.025 14.7 0.1 0.027 14.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5102) Toxin_GhoT_OrtT PF10753.9 NODE_88453_length_182_cov_1.265306_g80512_i0reverse_frame_1 - 0.01 16.1 0.0 0.013 15.7 0.0 1.2 1 0 0 1 1 1 0 Toxin GhoT_OrtT NOB1_Zn_bind PF08772.11 NODE_88446_length_182_cov_1.272109_g80505_i0reverse_frame_1 - 2.6e-10 40.3 3.3 2.7e-10 40.2 3.3 1.0 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like BH4 PF02180.17 NODE_88444_length_182_cov_1.272109_g80503_i0reverse_frame_1 - 0.13 12.1 0.4 0.25 11.2 0.4 1.5 1 0 0 1 1 1 0 Bcl-2 homology region 4 Thioredoxin PF00085.20 NODE_88443_length_182_cov_1.272109_g80502_i0forward_frame_1 - 0.1 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin Sugar_tr PF00083.24 NODE_88440_length_182_cov_1.278912_g80499_i0forward_frame_1 - 0.15 10.9 2.3 0.15 10.9 2.3 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter YgbB PF02542.16 NODE_88422_length_182_cov_1.319728_g80481_i0forward_frame_1 - 9.6e-24 84.4 2.2 1e-23 84.3 2.2 1.0 1 0 0 1 1 1 1 YgbB family Arc_PepC_II PF06847.11 NODE_88416_length_182_cov_1.340136_g80475_i0reverse_frame_1 - 0.14 12.7 1.0 0.16 12.5 0.3 1.4 2 0 0 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II Spt46 PF17734.1 NODE_88415_length_182_cov_1.346939_g80474_i0forward_frame_1 - 0.16 11.8 0.3 0.16 11.7 0.3 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 Spt20 PF12090.8 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_1 - 0.046 13.3 13.7 0.052 13.2 13.7 1.0 1 0 0 1 1 1 0 Spt20 family ATP-synt_E PF05680.12 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_1 - 0.94 9.9 4.9 1.3 9.4 4.9 1.2 1 0 0 1 1 1 0 ATP synthase E chain Connexin PF00029.19 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_1 - 1.1 8.9 5.6 1.2 8.9 5.6 1.0 1 0 0 1 1 1 0 Connexin SelP_N PF04592.14 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_1 - 1.6 8.0 24.1 1.9 7.8 24.1 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region DUF2418 PF10332.9 NODE_88412_length_182_cov_1.346939_g80471_i0forward_frame_1 - 1.2 9.8 4.0 1.4 9.5 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) DUF5445 PF17520.2 NODE_88400_length_182_cov_1.353741_g80459_i0forward_frame_1 - 0.098 12.5 1.5 0.12 12.2 1.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5445) UBA_2 PF08587.11 NODE_88385_length_182_cov_1.360544_g80444_i0forward_frame_1 - 0.045 13.9 0.0 0.059 13.5 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin associated domain (UBA) Kelch_4 PF13418.6 NODE_88377_length_182_cov_1.374150_g80436_i0reverse_frame_1 - 0.0091 16.0 0.0 0.014 15.4 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_88377_length_182_cov_1.374150_g80436_i0reverse_frame_1 - 0.047 14.0 0.1 1.3 9.4 0.0 2.1 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_88377_length_182_cov_1.374150_g80436_i0reverse_frame_1 - 0.094 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_2 PF07646.15 NODE_88377_length_182_cov_1.374150_g80436_i0reverse_frame_1 - 0.11 12.5 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Kelch motif BCLP PF12304.8 NODE_88372_length_182_cov_1.394558_g80431_i0reverse_frame_1 - 0.057 13.0 0.0 0.061 12.9 0.0 1.2 1 0 0 1 1 1 0 Beta-casein like protein DUF5406 PF17400.2 NODE_88363_length_182_cov_1.428571_g80422_i0forward_frame_1 - 0.022 15.1 0.5 0.027 14.9 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5406) DUF5472 PF17566.2 NODE_88361_length_182_cov_1.448980_g80420_i0forward_frame_1 - 0.066 13.2 0.4 0.073 13.0 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5472) Kinocilin PF15033.6 NODE_88355_length_182_cov_1.482993_g80414_i0forward_frame_1 - 0.025 14.2 0.3 0.027 14.1 0.3 1.1 1 0 0 1 1 1 0 Kinocilin protein DUF1279 PF06916.13 NODE_88352_length_182_cov_1.482993_g80411_i0forward_frame_1 - 0.067 13.7 0.6 0.078 13.5 0.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1279) YfhO PF09586.10 NODE_88352_length_182_cov_1.482993_g80411_i0forward_frame_1 - 0.18 10.0 8.8 0.18 10.0 8.8 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO RecA_dep_nuc PF16786.5 NODE_88350_length_182_cov_1.489796_g80409_i0forward_frame_1 - 0.044 13.9 0.7 0.055 13.6 0.7 1.2 1 0 0 1 1 1 0 Recombination enhancement, RecA-dependent nuclease zf-CGNR PF11706.8 NODE_88348_length_182_cov_1.503401_g80407_i0forward_frame_1 - 0.37 10.7 3.9 2.3 8.2 3.9 2.0 1 1 0 1 1 1 0 CGNR zinc finger Afi1 PF07792.12 NODE_88338_length_182_cov_1.551020_g80397_i0forward_frame_1 - 2 8.9 13.6 2.2 8.8 13.6 1.1 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking Tim54 PF11711.8 NODE_88338_length_182_cov_1.551020_g80397_i0forward_frame_1 - 3 6.5 5.3 2.8 6.6 5.3 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Zip PF02535.22 NODE_88338_length_182_cov_1.551020_g80397_i0forward_frame_1 - 6.1 6.0 5.8 6.2 5.9 5.8 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF913 PF06025.12 NODE_88338_length_182_cov_1.551020_g80397_i0forward_frame_1 - 8.3 5.3 7.0 8 5.3 7.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) FCSD-flav_bind PF09242.11 NODE_88325_length_182_cov_1.598639_g80384_i0reverse_frame_1 - 0.14 12.5 0.9 0.3 11.4 0.7 1.6 1 1 1 2 2 2 0 Flavocytochrome c sulphide dehydrogenase, flavin-binding PetN PF03742.14 NODE_88315_length_182_cov_1.619048_g80374_i0forward_frame_1 - 0.015 15.2 1.7 0.03 14.2 1.7 1.5 1 0 0 1 1 1 0 PetN DUF4456 PF14644.6 NODE_88310_length_182_cov_1.619048_g80369_i0reverse_frame_1 - 0.0096 15.6 0.4 0.01 15.5 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4456) EGF_MSP1_1 PF12946.7 NODE_88298_length_182_cov_1.632653_g80357_i0forward_frame_1 - 0.011 15.8 0.3 0.016 15.3 0.3 1.3 1 0 0 1 1 1 0 MSP1 EGF domain 1 FeThRed_A PF02941.15 NODE_88291_length_182_cov_1.632653_g80350_i0reverse_frame_1 - 0.26 11.4 0.0 0.29 11.3 0.0 1.2 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase variable alpha chain Aa_trans PF01490.18 NODE_88288_length_182_cov_1.632653_g80347_i0forward_frame_1 - 0.00088 18.1 0.8 0.00088 18.1 0.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Phage-tail_3 PF13550.6 NODE_88284_length_182_cov_1.632653_g80343_i0reverse_frame_1 - 0.027 14.3 0.1 0.029 14.2 0.1 1.1 1 0 0 1 1 1 0 Putative phage tail protein Hormone_3 PF00159.18 NODE_88284_length_182_cov_1.632653_g80343_i0reverse_frame_1 - 0.068 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Pancreatic hormone peptide SatRNA_48 PF17485.2 NODE_88281_length_182_cov_1.653061_g80340_i0forward_frame_1 - 0.045 12.9 0.1 0.047 12.8 0.1 1.0 1 0 0 1 1 1 0 Satellite RNA 48 kDa protein DUF3325 PF11804.8 NODE_88275_length_182_cov_1.687075_g80334_i0reverse_frame_1 - 0.14 12.3 0.0 0.14 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) GED PF02212.18 NODE_88274_length_182_cov_1.693878_g80333_i0reverse_frame_1 - 0.1 12.8 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Dynamin GTPase effector domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks410.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks410.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks410.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks410.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PDR_assoc PF08370.11 NODE_88263_length_182_cov_1.768707_g80322_i0forward_frame_1 - 0.6 9.9 2.5 4.3 7.2 0.2 2.1 2 0 0 2 2 2 0 Plant PDR ABC transporter associated IL11 PF07400.11 NODE_88261_length_182_cov_1.782313_g80320_i0forward_frame_1 - 0.0066 16.1 0.0 0.007 16.0 0.0 1.1 1 0 0 1 1 1 1 Interleukin 11 AA_permease PF00324.21 NODE_88255_length_182_cov_1.829932_g80314_i0reverse_frame_1 - 8.5e-09 34.5 2.4 9e-09 34.4 2.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_88255_length_182_cov_1.829932_g80314_i0reverse_frame_1 - 4.5e-07 29.0 3.7 5.1e-07 28.9 3.7 1.0 1 0 0 1 1 1 1 Amino acid permease SCF PF02404.15 NODE_88243_length_182_cov_1.904762_g80302_i0reverse_frame_1 - 0.17 11.2 0.9 0.18 11.2 0.9 1.2 1 0 0 1 1 1 0 Stem cell factor Sterol-sensing PF12349.8 NODE_88243_length_182_cov_1.904762_g80302_i0forward_frame_1 - 0.00047 20.0 0.1 0.00048 20.0 0.1 1.0 1 0 0 1 1 1 1 Sterol-sensing domain of SREBP cleavage-activation Thermopsin PF05317.11 NODE_88238_length_182_cov_1.904762_g80297_i0reverse_frame_1 - 0.011 15.2 0.1 0.013 15.0 0.1 1.0 1 0 0 1 1 1 0 Thermopsin DUF4772 PF15997.5 NODE_88238_length_182_cov_1.904762_g80297_i0reverse_frame_1 - 0.15 12.7 0.0 0.17 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4772) Ndr PF03096.14 NODE_88236_length_182_cov_1.918367_g80295_i0reverse_frame_1 - 0.0077 15.0 0.2 0.008 14.9 0.2 1.0 1 0 0 1 1 1 1 Ndr family nsp7 PF08716.10 NODE_88236_length_182_cov_1.918367_g80295_i0forward_frame_1 - 0.047 14.3 0.0 0.052 14.2 0.0 1.0 1 0 0 1 1 1 0 nsp7 replicase DUF3201 PF11447.8 NODE_88235_length_182_cov_1.918367_g80294_i0reverse_frame_1 - 0.061 12.9 0.1 0.064 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3201) MORN PF02493.20 NODE_88234_length_182_cov_1.931973_g80293_i0reverse_frame_1 - 1.5e-10 40.4 16.0 2.5e-05 23.9 1.8 3.3 4 0 0 4 4 4 3 MORN repeat CHASE9 PF17153.4 NODE_88233_length_182_cov_1.945578_g80292_i0reverse_frame_1 - 0.041 14.0 0.4 0.042 14.0 0.4 1.0 1 0 0 1 1 1 0 Periplasmic sensor domain, extracellular PPC PF04151.15 NODE_88232_length_182_cov_1.952381_g80291_i0reverse_frame_1 - 7.4e-06 27.0 0.1 9.1e-06 26.7 0.1 1.0 1 0 0 1 1 1 1 Bacterial pre-peptidase C-terminal domain Trp_Tyr_perm PF03222.13 NODE_88225_length_182_cov_2.020408_g80284_i0reverse_frame_1 - 1.5e-05 24.3 2.6 1.6e-05 24.2 2.6 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF5579 PF17742.1 NODE_88225_length_182_cov_2.020408_g80284_i0reverse_frame_1 - 0.082 12.5 0.2 0.095 12.3 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5579) Sp38 PF07354.12 NODE_88221_length_182_cov_2.047619_g80280_i0reverse_frame_1 - 0.0079 15.6 3.1 0.0088 15.5 3.1 1.1 1 0 0 1 1 1 1 Zona-pellucida-binding protein (Sp38) HicB PF05534.12 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_1 - 0.18 11.6 0.0 2.4 8.1 0.0 2.1 2 0 0 2 2 2 0 HicB family Beta-APP PF03494.13 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_1 - 0.19 11.6 0.0 10 6.0 0.0 2.5 3 0 0 3 3 3 0 Beta-amyloid peptide (beta-APP) DUF5584 PF17822.1 NODE_88214_length_182_cov_2.115646_g80273_i0reverse_frame_1 - 0.038 13.5 1.2 0.036 13.5 1.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5584) PuR_N PF09182.10 NODE_88209_length_182_cov_2.142857_g80268_i0reverse_frame_1 - 0.042 13.8 0.1 0.06 13.3 0.1 1.2 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal Annexin PF00191.20 NODE_88207_length_182_cov_2.163265_g80266_i0reverse_frame_1 - 0.041 14.0 0.2 0.05 13.7 0.2 1.2 1 0 0 1 1 1 0 Annexin Nbas_N PF15492.6 NODE_88204_length_182_cov_2.170068_g80263_i0forward_frame_1 - 0.22 10.8 0.8 0.24 10.7 0.8 1.0 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal GpcrRhopsn4 PF10192.9 NODE_88202_length_182_cov_2.176871_g80261_i0forward_frame_1 - 6.5e-05 22.5 1.5 7.2e-05 22.3 1.5 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain PPV_E1_N PF00524.18 NODE_88198_length_182_cov_2.176871_g80257_i0forward_frame_1 - 0.059 13.8 0.1 0.063 13.7 0.1 1.1 1 0 0 1 1 1 0 E1 Protein, N terminal domain Sigma70_r1_1 PF03979.14 NODE_88189_length_182_cov_2.306122_g80248_i0reverse_frame_1 - 0.0086 16.1 0.0 0.01 15.9 0.0 1.1 1 0 0 1 1 1 1 Sigma-70 factor, region 1.1 DprA_WH PF17782.1 NODE_88189_length_182_cov_2.306122_g80248_i0reverse_frame_1 - 0.035 14.2 0.7 0.044 13.9 0.7 1.2 1 0 0 1 1 1 0 DprA winged helix domain PRIMA1 PF16101.5 NODE_88189_length_182_cov_2.306122_g80248_i0reverse_frame_1 - 0.11 12.5 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 SelP_N PF04592.14 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 0.034 13.6 26.7 0.035 13.5 26.7 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Troponin-I_N PF11636.8 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 0.15 12.1 0.1 0.19 11.7 0.1 1.2 1 0 0 1 1 1 0 Troponin I residues 1-32 PriC PF07445.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 0.35 10.8 6.5 0.4 10.6 6.5 1.0 1 0 0 1 1 1 0 Primosomal replication protein priC DUF2946 PF11162.8 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 0.49 11.1 8.3 0.53 11.0 8.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) Zip PF02535.22 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 2 7.5 9.6 2 7.5 9.6 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Macoilin PF09726.9 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 3.2 6.2 5.4 3.3 6.2 5.4 1.0 1 0 0 1 1 1 0 Macoilin family Defensin_beta PF00711.19 NODE_88184_length_182_cov_2.442177_g80243_i0forward_frame_1 - 0.0021 18.0 2.0 0.0027 17.7 2.0 1.1 1 0 0 1 1 1 1 Beta defensin Chromosome_seg PF13889.6 NODE_88181_length_182_cov_2.442177_g80240_i0reverse_frame_1 - 0.074 13.2 0.2 0.12 12.6 0.2 1.4 1 0 0 1 1 1 0 Chromosome segregation during meiosis TMEM223 PF14640.6 NODE_88167_length_182_cov_2.517007_g80226_i0reverse_frame_1 - 0.012 15.8 0.1 0.013 15.7 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 223 DUF4712 PF15830.5 NODE_88163_length_182_cov_2.605442_g80222_i0forward_frame_1 - 0.1 12.3 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4712) Doppel PF11466.8 NODE_88132_length_182_cov_4.210884_g80191_i0forward_frame_1 - 0.086 12.5 0.9 0.41 10.4 0.9 2.0 1 1 0 1 1 1 0 Prion-like protein Doppel ChAPs PF09295.10 NODE_88128_length_182_cov_4.619048_g80187_i0reverse_frame_1 - 0.26 10.3 0.0 0.26 10.3 0.0 1.0 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) H2O2_YaaD PF03883.14 NODE_88127_length_182_cov_4.619048_g80186_i0reverse_frame_1 - 2.9e-21 76.0 0.0 3.1e-21 75.9 0.0 1.0 1 0 0 1 1 1 1 Peroxide stress protein YaaA Dynamitin PF04912.14 NODE_88121_length_182_cov_8.210884_g80180_i0reverse_frame_1 - 0.062 12.6 1.5 0.07 12.4 1.5 1.0 1 0 0 1 1 1 0 Dynamitin DUF1534 PF07551.11 NODE_88115_length_182_cov_17.231293_g80174_i0forward_frame_1 - 0.026 14.2 0.1 0.036 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1534) TraG_N PF07916.11 NODE_88114_length_182_cov_20.156463_g80173_i0forward_frame_1 - 0.12 11.2 1.2 0.12 11.2 1.2 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region RNA_polI_A34 PF08208.11 NODE_88113_length_182_cov_20.272109_g80172_i0reverse_frame_1 - 3.7 7.6 20.1 4.1 7.4 20.1 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Casc1_N PF15927.5 NODE_88113_length_182_cov_20.272109_g80172_i0reverse_frame_1 - 8.9 5.9 22.1 11 5.6 22.1 1.1 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus Rib_hydrolayse PF02267.17 NODE_88113_length_182_cov_20.272109_g80172_i0forward_frame_1 - 0.12 11.8 3.5 0.13 11.7 3.5 1.0 1 0 0 1 1 1 0 ADP-ribosyl cyclase Swm2 PF17083.5 NODE_88109_length_182_cov_22.319728_g80168_i0forward_frame_1 - 0.027 14.5 1.1 0.028 14.4 1.1 1.0 1 0 0 1 1 1 0 Nucleolar protein Swm2 DUF1324 PF07038.11 NODE_88097_length_182_cov_30.707483_g80156_i0forward_frame_1 - 0.017 15.3 0.9 0.025 14.8 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1324) Autophagy_C PF10381.9 NODE_88091_length_182_cov_32.959184_g80150_i0forward_frame_1 - 0.014 14.9 0.2 0.025 14.1 0.2 1.4 1 0 0 1 1 1 0 Autophagocytosis associated protein C-terminal Abhydrolase_2 PF02230.16 NODE_88081_length_182_cov_36.591837_g80140_i0reverse_frame_1 - 0.085 12.7 0.0 0.09 12.6 0.0 1.1 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase CaMBD PF02888.16 NODE_88076_length_182_cov_38.993197_g80135_i0reverse_frame_1 - 0.023 14.9 0.1 0.028 14.6 0.1 1.3 1 0 0 1 1 1 0 Calmodulin binding domain HEPN_RiboL-PSP PF18735.1 NODE_88073_length_182_cov_39.653061_g80132_i0forward_frame_1 - 0.16 11.9 0.1 0.16 11.9 0.1 1.0 1 0 0 1 1 1 0 RiboL-PSP-HEPN Inj_translocase PF16928.5 NODE_88069_length_182_cov_44.707483_g80128_i0reverse_frame_1 - 0.09 12.2 0.9 0.084 12.3 0.9 1.0 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome Cbl_N2 PF02761.14 NODE_88067_length_182_cov_46.006803_g80126_i0reverse_frame_1 - 0.025 15.3 0.1 0.027 15.2 0.1 1.1 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, EF hand-like domain NqrM PF04400.13 NODE_88057_length_182_cov_53.088435_g80116_i0forward_frame_1 - 8.6 6.2 8.1 35 4.2 8.1 1.9 1 1 0 1 1 1 0 (Na+)-NQR maturation NqrM Calc_CGRP_IAPP PF00214.19 NODE_88032_length_182_cov_141.884354_g80091_i0reverse_frame_1 - 0.019 15.3 2.4 0.02 15.2 2.4 1.1 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family IGF2_C PF08365.11 NODE_88027_length_182_cov_178.442177_g80086_i0reverse_frame_1 - 0.0012 18.8 3.1 0.34 10.9 3.1 2.6 1 1 0 1 1 1 1 Insulin-like growth factor II E-peptide Pertus-S5-tox PF09276.10 NODE_88020_length_182_cov_487.619048_g80079_i0forward_frame_1 - 0.1 12.7 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Pertussis toxin S5 subunit Bac_rhamnosid PF05592.11 NODE_88007_length_183_cov_0.810811_g80066_i0reverse_frame_1 - 0.1 12.6 0.1 0.1 12.6 0.1 1.0 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase concanavalin-like domain Ras PF00071.22 NODE_88000_length_183_cov_0.810811_g80059_i0reverse_frame_1 - 1.5e-14 53.9 0.1 1.5e-14 53.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_88000_length_183_cov_0.810811_g80059_i0reverse_frame_1 - 1.4e-10 41.4 0.1 1.5e-10 41.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_88000_length_183_cov_0.810811_g80059_i0reverse_frame_1 - 0.0062 16.0 0.1 0.007 15.8 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Pox_T4_N PF04491.12 NODE_87999_length_183_cov_0.844595_g80058_i0reverse_frame_1 - 0.22 11.4 0.2 0.3 11.0 0.2 1.2 1 0 0 1 1 1 0 Poxvirus T4 protein, N terminus DUF5549 PF17703.1 NODE_87992_length_183_cov_0.871622_g80051_i0forward_frame_1 - 0.0097 15.6 0.4 0.011 15.4 0.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5549) PAN_3 PF08277.12 NODE_87989_length_183_cov_0.912162_g80048_i0reverse_frame_1 - 0.034 13.9 1.2 0.036 13.9 1.2 1.1 1 0 0 1 1 1 0 PAN-like domain WSK PF03832.13 NODE_87988_length_183_cov_0.912162_g80047_i0reverse_frame_1 - 6.6 6.5 8.6 12 5.6 8.6 1.5 1 0 0 1 1 1 0 WSK motif LnmK_N_HDF PF18238.1 NODE_87987_length_183_cov_0.918919_g80046_i0reverse_frame_1 - 0.089 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 LnmK N-terminal Hot Dog Fold domain DUF3565 PF12088.8 NODE_87981_length_183_cov_0.966216_g80040_i0forward_frame_1 - 0.11 12.5 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3565) DDE_Tnp_Tn3 PF01526.17 NODE_87973_length_183_cov_1.006757_g80032_i0reverse_frame_1 - 4.4e-14 52.1 0.0 4.5e-14 52.0 0.0 1.0 1 0 0 1 1 1 1 Tn3 transposase DDE domain RE_NgoBV PF09564.10 NODE_87970_length_183_cov_1.033784_g80029_i0forward_frame_1 - 0.11 11.9 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 NgoBV restriction endonuclease OapA_N PF08525.11 NODE_87968_length_183_cov_1.040541_g80027_i0reverse_frame_1 - 0.098 12.6 0.3 0.14 12.1 0.3 1.2 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif AMNp_N PF10423.9 NODE_87968_length_183_cov_1.040541_g80027_i0reverse_frame_1 - 0.14 11.8 0.1 0.15 11.6 0.1 1.1 1 0 0 1 1 1 0 Bacterial AMP nucleoside phosphorylase N-terminus Cu-oxidase PF00394.22 NODE_87967_length_183_cov_1.047297_g80026_i0reverse_frame_1 - 0.073 13.2 0.0 0.075 13.1 0.0 1.0 1 0 0 1 1 1 0 Multicopper oxidase Glyco_hydro_36N PF16875.5 NODE_87964_length_183_cov_1.047297_g80023_i0forward_frame_1 - 0.1 12.1 0.4 0.12 11.9 0.4 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 36 N-terminal domain Lamprin PF06403.11 NODE_87954_length_183_cov_1.067568_g80013_i0reverse_frame_1 - 0.036 14.0 1.1 0.038 13.9 1.1 1.0 1 0 0 1 1 1 0 Lamprin CBM_19 PF03427.13 NODE_87927_length_183_cov_1.074324_g79986_i0reverse_frame_1 - 0.041 13.9 1.9 0.05 13.6 1.9 1.2 1 0 0 1 1 1 0 Carbohydrate binding domain (family 19) Lamprin PF06403.11 NODE_87923_length_183_cov_1.074324_g79982_i0forward_frame_1 - 1.2 9.1 17.4 5.8 6.9 17.4 2.0 1 1 0 1 1 1 0 Lamprin Phage_C PF12025.8 NODE_87916_length_183_cov_1.081081_g79975_i0reverse_frame_1 - 0.4 10.6 1.9 0.51 10.2 0.3 1.8 2 0 0 2 2 2 0 Phage protein C DUF2169 PF09937.9 NODE_87911_length_183_cov_1.081081_g79970_i0forward_frame_1 - 0.083 12.3 0.1 0.083 12.3 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2169) Phage_fiber PF03335.13 NODE_87908_length_183_cov_1.081081_g79967_i0forward_frame_1 - 0.11 12.7 0.7 0.22 11.8 0.7 1.5 1 0 0 1 1 1 0 Phage tail fibre repeat Vpu PF00558.19 NODE_87903_length_183_cov_1.081081_g79962_i0forward_frame_1 - 0.076 12.8 1.0 0.089 12.6 1.0 1.3 1 0 0 1 1 1 0 Vpu protein Lar_N PF09861.9 NODE_87895_length_183_cov_1.081081_g79954_i0reverse_frame_1 - 0.11 11.7 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Lactate racemase N-terminal domain COPIIcoated_ERV PF07970.12 NODE_87889_length_183_cov_1.081081_g79948_i0forward_frame_1 - 0.084 12.7 0.0 0.084 12.7 0.0 1.0 1 0 0 1 1 1 0 Endoplasmic reticulum vesicle transporter HTH_20 PF12840.7 NODE_87885_length_183_cov_1.081081_g79944_i0forward_frame_1 - 0.062 13.4 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain Transgly_assoc PF04226.13 NODE_87862_length_183_cov_1.081081_g79921_i0forward_frame_1 - 0.082 13.2 0.2 0.12 12.6 0.2 1.3 1 0 0 1 1 1 0 Transglycosylase associated protein YjbR PF04237.13 NODE_87859_length_183_cov_1.081081_g79918_i0reverse_frame_1 - 0.15 12.6 0.0 0.18 12.3 0.0 1.2 1 1 0 1 1 1 0 YjbR Pneumo_phosprot PF02478.16 NODE_87853_length_183_cov_1.081081_g79912_i0forward_frame_1 - 0.085 12.4 0.0 0.093 12.3 0.0 1.0 1 0 0 1 1 1 0 Pneumovirus phosphoprotein Cadherin_C_2 PF16492.5 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.003 18.2 0.2 0.0036 18.0 0.2 1.1 1 0 0 1 1 1 1 Cadherin cytoplasmic C-terminal Metal_resist PF13801.6 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.0065 16.7 1.8 0.0075 16.5 1.8 1.2 1 0 0 1 1 1 1 Heavy-metal resistance EphA2_TM PF14575.6 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.042 14.7 0.1 0.049 14.5 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Fungus-induced PF10917.8 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.33 11.3 4.0 0.23 11.8 2.7 1.5 1 1 0 1 1 1 0 Fungus-induced protein Neur_chan_memb PF02932.16 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.41 10.6 2.2 0.39 10.7 2.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region ECSCR PF15820.5 NODE_87850_length_183_cov_1.081081_g79909_i0forward_frame_1 - 0.038 13.8 0.5 0.048 13.5 0.5 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Cytomega_TRL10 PF06084.11 NODE_87850_length_183_cov_1.081081_g79909_i0forward_frame_1 - 0.11 12.5 0.3 0.12 12.4 0.3 1.1 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein EphA2_TM PF14575.6 NODE_87850_length_183_cov_1.081081_g79909_i0forward_frame_1 - 0.14 13.0 0.6 0.14 13.0 0.6 1.7 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Cyd_oper_YbgE PF09600.10 NODE_87848_length_183_cov_1.081081_g79907_i0forward_frame_1 - 0.044 14.1 0.1 0.064 13.6 0.1 1.3 1 0 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) Sulfate_transp PF00916.20 NODE_87839_length_183_cov_1.081081_g79898_i0forward_frame_1 - 2.7e-15 56.0 2.9 2.9e-15 55.9 2.9 1.0 1 0 0 1 1 1 1 Sulfate permease family RVT_1 PF00078.27 NODE_87837_length_183_cov_1.087838_g79896_i0reverse_frame_1 - 0.034 13.6 0.0 0.052 13.1 0.0 1.4 1 1 1 2 2 2 0 Reverse transcriptase (RNA-dependent DNA polymerase) UBZ_FAAP20 PF15750.5 NODE_87827_length_183_cov_1.121622_g79886_i0reverse_frame_1 - 0.046 13.7 0.5 0.12 12.3 0.2 1.9 2 0 0 2 2 2 0 Ubiquitin-binding zinc-finger DUF4227 PF14004.6 NODE_87821_length_183_cov_1.148649_g79880_i0reverse_frame_1 - 0.0098 15.8 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4227) DUF3297 PF11730.8 NODE_87817_length_183_cov_1.155405_g79876_i0forward_frame_1 - 0.16 11.9 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3297) Fzo_mitofusin PF04799.13 NODE_87813_length_183_cov_1.162162_g79872_i0forward_frame_1 - 0.25 10.9 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 fzo-like conserved region TNT PF14021.6 NODE_87802_length_183_cov_1.195946_g79861_i0reverse_frame_1 - 0.026 15.1 0.0 0.032 14.8 0.0 1.1 1 0 0 1 1 1 0 Tuberculosis necrotizing toxin DUF4500 PF14937.6 NODE_87801_length_183_cov_1.195946_g79860_i0forward_frame_1 - 0.1 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4500) SulA PF03846.14 NODE_87800_length_183_cov_1.209459_g79859_i0reverse_frame_1 - 0.021 14.7 2.8 0.024 14.6 2.8 1.1 1 0 0 1 1 1 0 Cell division inhibitor SulA DUF2526 PF10735.9 NODE_87800_length_183_cov_1.209459_g79859_i0reverse_frame_1 - 0.12 12.6 0.7 0.14 12.3 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2526) TMEM154 PF15102.6 NODE_87795_length_183_cov_1.222973_g79854_i0reverse_frame_1 - 0.046 13.6 0.1 0.05 13.5 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family SCIMP PF15050.6 NODE_87795_length_183_cov_1.222973_g79854_i0reverse_frame_1 - 0.11 13.0 0.1 0.11 12.9 0.1 1.1 1 0 0 1 1 1 0 SCIMP protein UPF0542 PF15086.6 NODE_87795_length_183_cov_1.222973_g79854_i0reverse_frame_1 - 0.11 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 FSAP_sig_propep PF03032.15 NODE_87795_length_183_cov_1.222973_g79854_i0reverse_frame_1 - 0.16 12.0 2.8 0.18 11.9 2.0 1.6 1 1 0 1 1 1 0 Frog skin active peptide family signal and propeptide Csm1_N PF18504.1 NODE_87780_length_183_cov_1.270270_g79839_i0reverse_frame_1 - 0.1 12.9 8.2 0.9 9.9 1.7 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF3450 PF11932.8 NODE_87780_length_183_cov_1.270270_g79839_i0reverse_frame_1 - 2.4 7.4 10.5 2.6 7.3 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) eIF-4B PF06273.11 NODE_87780_length_183_cov_1.270270_g79839_i0reverse_frame_1 - 7.8 5.4 7.4 7.9 5.4 7.4 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Mtc PF03820.17 NODE_87770_length_183_cov_1.297297_g79829_i0forward_frame_1 - 4.1e-18 65.5 0.0 4.3e-18 65.4 0.0 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier MPS-4 PF17523.2 NODE_87767_length_183_cov_1.304054_g79826_i0forward_frame_1 - 0.036 14.2 0.7 0.041 14.0 0.7 1.2 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Lamprin PF06403.11 NODE_87766_length_183_cov_1.304054_g79825_i0forward_frame_1 - 0.028 14.4 1.4 0.032 14.2 1.4 1.1 1 0 0 1 1 1 0 Lamprin Transket_pyr PF02779.24 NODE_87765_length_183_cov_1.310811_g79824_i0forward_frame_1 - 1.6e-05 24.7 0.1 1.8e-05 24.5 0.1 1.1 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Gemini_mov PF01708.16 NODE_87764_length_183_cov_1.310811_g79823_i0reverse_frame_1 - 0.078 12.8 0.3 0.11 12.3 0.3 1.2 1 0 0 1 1 1 0 Geminivirus putative movement protein PH_TFIIH PF08567.11 NODE_87759_length_183_cov_1.331081_g79818_i0reverse_frame_1 - 0.028 14.8 0.4 0.031 14.6 0.4 1.1 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain DUF5132 PF17195.4 NODE_87754_length_183_cov_1.344595_g79813_i0reverse_frame_1 - 0.028 14.5 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF5132) Androgen_recep PF02166.16 NODE_87752_length_183_cov_1.344595_g79811_i0reverse_frame_1 - 2.6 6.8 11.5 2.6 6.8 11.5 1.0 1 0 0 1 1 1 0 Androgen receptor Choline_transpo PF04515.12 NODE_87752_length_183_cov_1.344595_g79811_i0forward_frame_1 - 2.1 7.4 10.2 2.3 7.4 10.2 1.1 1 0 0 1 1 1 0 Plasma-membrane choline transporter HCMV_UL139 PF12507.8 NODE_87752_length_183_cov_1.344595_g79811_i0forward_frame_1 - 8.6 6.8 7.7 12 6.3 7.7 1.3 1 1 0 1 1 1 0 Human Cytomegalovirus UL139 protein DUF1231 PF06802.11 NODE_87748_length_183_cov_1.351351_g79807_i0forward_frame_1 - 0.023 13.8 0.7 0.023 13.8 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1231) G_glu_transpept PF01019.21 NODE_87747_length_183_cov_1.351351_g79806_i0forward_frame_1 - 0.061 12.1 0.0 0.063 12.0 0.0 1.0 1 0 0 1 1 1 0 Gamma-glutamyltranspeptidase Toxin_6 PF05453.12 NODE_87742_length_183_cov_1.351351_g79801_i0forward_frame_1 - 0.18 12.3 1.0 0.28 11.7 1.0 1.2 1 0 0 1 1 1 0 BmTXKS1/BmP02 toxin family Multi_Drug_Res PF00893.19 NODE_87739_length_183_cov_1.351351_g79798_i0forward_frame_1 - 1.5e-11 44.8 1.1 1.7e-11 44.6 0.9 1.3 1 1 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 NODE_87739_length_183_cov_1.351351_g79798_i0forward_frame_1 - 0.0015 18.7 3.5 0.0016 18.6 3.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family Nuc_sug_transp PF04142.15 NODE_87739_length_183_cov_1.351351_g79798_i0forward_frame_1 - 0.0055 15.9 0.0 0.0058 15.8 0.0 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter DMT_6 PF04342.12 NODE_87739_length_183_cov_1.351351_g79798_i0forward_frame_1 - 0.078 13.2 0.5 0.09 13.0 0.5 1.1 1 0 0 1 1 1 0 Putative member of DMT superfamily (DUF486) Motile_Sperm PF00635.26 NODE_87737_length_183_cov_1.364865_g79796_i0forward_frame_1 - 0.05 13.4 0.2 0.058 13.2 0.2 1.2 1 0 0 1 1 1 0 MSP (Major sperm protein) domain SNF2_N PF00176.23 NODE_87736_length_183_cov_1.385135_g79795_i0reverse_frame_1 - 0.039 12.7 0.1 0.04 12.6 0.1 1.0 1 0 0 1 1 1 0 SNF2 family N-terminal domain DUF1236 PF06823.12 NODE_87729_length_183_cov_1.425676_g79788_i0forward_frame_1 - 0.071 13.0 0.1 0.11 12.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1236) AbiEi_4 PF13338.6 NODE_87693_length_183_cov_1.594595_g79752_i0reverse_frame_1 - 0.091 12.9 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin UPF0552 PF10574.9 NODE_87684_length_183_cov_1.608108_g79743_i0reverse_frame_1 - 0.022 14.1 0.1 0.025 13.9 0.1 1.0 1 0 0 1 1 1 0 Arp2/3-interacting proteins Arpin DUF1011 PF06237.12 NODE_87682_length_183_cov_1.614865_g79741_i0forward_frame_1 - 0.086 13.2 0.2 0.091 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1011) DUF2754 PF10953.8 NODE_87676_length_183_cov_1.614865_g79735_i0forward_frame_1 - 0.18 12.0 0.0 0.25 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) SCAN PF02023.17 NODE_87665_length_183_cov_1.621622_g79724_i0reverse_frame_1 - 0.035 13.9 0.2 0.042 13.7 0.2 1.1 1 0 0 1 1 1 0 SCAN domain DUF5623 PF18536.1 NODE_87665_length_183_cov_1.621622_g79724_i0reverse_frame_1 - 0.096 13.0 0.0 0.097 13.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5623) SoxD PF04267.12 NODE_87665_length_183_cov_1.621622_g79724_i0reverse_frame_1 - 0.12 12.5 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Sarcosine oxidase, delta subunit family GvpK PF05121.12 NODE_87662_length_183_cov_1.621622_g79721_i0reverse_frame_1 - 0.092 12.8 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Gas vesicle protein K SAWADEE PF16719.5 NODE_87655_length_183_cov_1.621622_g79714_i0forward_frame_1 - 0.07 13.1 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 SAWADEE domain Kelch_6 PF13964.6 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 1.3e-10 41.1 0.4 5.4e-06 26.5 0.1 2.0 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 7.4e-08 31.9 0.1 1.6e-06 27.6 0.0 2.1 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 0.00013 21.9 0.7 0.014 15.4 0.2 2.1 1 1 1 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 0.0012 19.0 0.3 1.8 9.0 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain aGPT-Pplase3 PF18746.1 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 0.025 13.9 0.0 0.025 13.9 0.0 1.1 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 DUF957 PF06117.11 NODE_87640_length_183_cov_1.682432_g79699_i0reverse_frame_1 - 0.087 12.4 0.2 0.12 11.9 0.2 1.2 1 0 0 1 1 1 0 Enterobacterial protein of unknown function (DUF957) AAA_7 PF12775.7 NODE_87616_length_183_cov_1.790541_g79675_i0forward_frame_1 - 1e-25 90.3 0.1 1e-25 90.3 0.1 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region TAP35_44 PF07265.11 NODE_87613_length_183_cov_1.810811_g79672_i0forward_frame_1 - 0.09 12.8 0.1 0.11 12.5 0.1 1.0 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 SH3_1 PF00018.28 NODE_87602_length_183_cov_1.858108_g79661_i0reverse_frame_1 - 0.062 12.9 0.0 0.095 12.3 0.0 1.4 1 0 0 1 1 1 0 SH3 domain Leader_Erm PF08253.11 NODE_87602_length_183_cov_1.858108_g79661_i0reverse_frame_1 - 0.1 12.9 0.1 0.21 11.9 0.1 1.5 1 0 0 1 1 1 0 Erm Leader peptide DUF4731 PF15875.5 NODE_87595_length_183_cov_1.891892_g79654_i0reverse_frame_1 - 0.068 13.4 0.2 0.073 13.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) Umbravirus_LDM PF04817.12 NODE_87589_length_183_cov_1.898649_g79648_i0reverse_frame_1 - 0.011 15.1 0.9 0.012 15.0 0.9 1.1 1 0 0 1 1 1 0 Umbravirus long distance movement (LDM) family HCV_NS5a PF01506.19 NODE_87579_length_183_cov_2.013514_g79638_i0forward_frame_1 - 0.043 13.7 0.7 2.4 8.1 0.0 2.2 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a protein membrane anchor MerR PF00376.23 NODE_87578_length_183_cov_2.020270_g79637_i0reverse_frame_1 - 0.049 13.4 0.0 0.067 13.0 0.0 1.2 1 0 0 1 1 1 0 MerR family regulatory protein S_tail_recep_bd PF14928.6 NODE_87576_length_183_cov_2.047297_g79635_i0forward_frame_1 - 0.011 16.4 0.2 0.017 15.8 0.2 1.6 1 1 0 1 1 1 0 Short tail fibre protein receptor-binding domain MORN PF02493.20 NODE_87574_length_183_cov_2.067568_g79633_i0forward_frame_1 - 0.12 12.3 1.8 0.76 9.8 0.2 2.9 4 0 0 4 4 4 0 MORN repeat ECM1 PF05782.11 NODE_87567_length_183_cov_2.135135_g79626_i0forward_frame_1 - 0.084 11.8 0.8 0.095 11.6 0.8 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) DUF4780 PF16012.5 NODE_87566_length_183_cov_2.135135_g79625_i0forward_frame_1 - 0.023 14.2 0.0 0.026 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4780) DUF433 PF04255.14 NODE_87561_length_183_cov_2.155405_g79620_i0forward_frame_1 - 0.019 14.8 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF433) Pestivirus_E2 PF16329.5 NODE_87555_length_183_cov_2.168919_g79614_i0reverse_frame_1 - 0.027 13.3 0.1 0.03 13.2 0.1 1.0 1 0 0 1 1 1 0 Pestivirus envelope glycoprotein E2 FAM216B PF15107.6 NODE_87554_length_183_cov_2.195946_g79613_i0forward_frame_1 - 0.014 15.2 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 FAM216B protein family SieB PF14163.6 NODE_87552_length_183_cov_2.256757_g79611_i0reverse_frame_1 - 0.6 9.6 4.2 0.65 9.5 4.2 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B Polysacc_synt_3 PF13440.6 NODE_87542_length_183_cov_2.391892_g79601_i0forward_frame_1 - 3.4e-10 39.6 0.1 3.5e-10 39.6 0.1 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein ZYG-11_interact PF05884.12 NODE_87542_length_183_cov_2.391892_g79601_i0forward_frame_1 - 0.0044 16.5 0.2 0.0048 16.4 0.2 1.0 1 0 0 1 1 1 1 Interactor of ZYG-11 Polysacc_synt PF01943.17 NODE_87542_length_183_cov_2.391892_g79601_i0forward_frame_1 - 0.0048 16.3 0.5 0.0049 16.3 0.5 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein TilS_C PF11734.8 NODE_87538_length_183_cov_2.439189_g79597_i0reverse_frame_1 - 0.13 11.8 0.1 0.18 11.2 0.1 1.3 1 1 0 1 1 1 0 TilS substrate C-terminal domain CM2 PF03021.14 NODE_87538_length_183_cov_2.439189_g79597_i0forward_frame_1 - 0.12 12.3 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Influenza C virus M2 protein IATP PF04568.12 NODE_87535_length_183_cov_2.459459_g79594_i0forward_frame_1 - 0.18 12.3 1.7 0.21 12.0 1.7 1.2 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP Myotub-related PF06602.14 NODE_87534_length_183_cov_2.466216_g79593_i0reverse_frame_1 - 1.9e-12 46.8 0.0 2.1e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain HrcA_DNA-bdg PF03444.15 NODE_87533_length_183_cov_2.486486_g79592_i0forward_frame_1 - 0.079 12.6 0.1 0.096 12.4 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Mut7-C PF01927.16 NODE_87532_length_183_cov_2.500000_g79591_i0forward_frame_1 - 0.016 15.3 1.7 0.018 15.1 1.7 1.0 1 0 0 1 1 1 0 Mut7-C RNAse domain DUF5452 PF17533.2 NODE_87532_length_183_cov_2.500000_g79591_i0forward_frame_1 - 0.042 13.9 0.2 0.048 13.7 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5452) Churchill PF06573.11 NODE_87532_length_183_cov_2.500000_g79591_i0forward_frame_1 - 0.071 13.4 4.6 0.098 13.0 4.6 1.2 1 0 0 1 1 1 0 Churchill protein GCS PF03074.16 NODE_87522_length_183_cov_2.695946_g79581_i0reverse_frame_1 - 9.9e-22 77.8 0.1 1.1e-21 77.7 0.1 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase Mtr2 PF10429.9 NODE_87512_length_183_cov_3.094595_g79571_i0reverse_frame_1 - 0.24 11.3 0.1 0.26 11.2 0.1 1.1 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 Marek_A PF02124.15 NODE_87512_length_183_cov_3.094595_g79571_i0forward_frame_1 - 0.053 13.3 0.1 0.058 13.2 0.1 1.0 1 0 0 1 1 1 0 Marek's disease glycoprotein A DUF3099 PF11298.8 NODE_87505_length_183_cov_3.304054_g79564_i0forward_frame_1 - 0.22 11.7 0.9 0.3 11.3 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) Usher PF00577.20 NODE_87496_length_183_cov_4.614865_g79555_i0reverse_frame_1 - 1.2e-27 97.0 0.2 1.3e-27 96.9 0.2 1.0 1 0 0 1 1 1 1 Outer membrane usher protein DUF3553 PF12073.8 NODE_87490_length_183_cov_10.378378_g79549_i0reverse_frame_1 - 0.057 13.1 0.0 0.07 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3553) TSP_C PF05735.12 NODE_87486_length_183_cov_12.513514_g79545_i0reverse_frame_1 - 0.0055 16.7 0.1 0.0061 16.5 0.1 1.0 1 0 0 1 1 1 1 Thrombospondin C-terminal region Endonuc-BsobI PF09194.10 NODE_87485_length_183_cov_17.148649_g79544_i0forward_frame_1 - 0.22 10.7 0.0 0.24 10.6 0.0 1.0 1 0 0 1 1 1 0 Restriction endonuclease BsobI PLA2_B PF01735.18 NODE_87483_length_183_cov_18.750000_g79542_i0reverse_frame_1 - 0.28 9.5 0.9 0.28 9.5 0.9 1.0 1 0 0 1 1 1 0 Lysophospholipase catalytic domain DUF620 PF04788.12 NODE_87483_length_183_cov_18.750000_g79542_i0forward_frame_1 - 0.071 12.5 0.1 0.079 12.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF620) TcpS PF17456.2 NODE_87481_length_183_cov_20.547297_g79540_i0forward_frame_1 - 0.062 13.4 0.3 0.066 13.3 0.3 1.0 1 0 0 1 1 1 0 Toxin-coregulated pilus protein S Orthopox_F7 PF05813.12 NODE_87479_length_183_cov_21.222973_g79538_i0reverse_frame_1 - 0.042 14.0 0.8 0.06 13.5 0.8 1.3 1 0 0 1 1 1 0 Orthopoxvirus F7 protein Myb_DNA-bind_2 PF08914.11 NODE_87470_length_183_cov_27.013514_g79529_i0forward_frame_1 - 0.0081 16.3 0.3 0.012 15.8 0.1 1.4 1 1 0 1 1 1 1 Rap1 Myb domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks411.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks411.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks411.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks411.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LapA_dom PF06305.11 NODE_87465_length_183_cov_30.831081_g79524_i0reverse_frame_1 - 0.1 12.4 1.0 0.13 12.1 1.0 1.3 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Mem_trans PF03547.18 NODE_87463_length_183_cov_32.790541_g79522_i0reverse_frame_1 - 0.086 11.2 2.2 0.094 11.1 2.2 1.0 1 0 0 1 1 1 0 Membrane transport protein DUF5480 PF17576.2 NODE_87460_length_183_cov_33.047297_g79519_i0reverse_frame_1 - 0.027 14.4 0.0 0.03 14.3 0.0 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5480) Phage_AlpA PF05930.12 NODE_87448_length_183_cov_38.189189_g79507_i0forward_frame_1 - 0.17 11.8 0.5 1.3 8.9 0.5 2.1 1 1 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) Nup160 PF11715.8 NODE_87427_length_183_cov_55.317568_g79486_i0reverse_frame_1 - 0.054 12.1 0.1 0.055 12.1 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin Nup120/160 Herpes_U34 PF04541.13 NODE_87427_length_183_cov_55.317568_g79486_i0forward_frame_1 - 0.11 11.7 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus virion protein U34 Trefoil PF00088.18 NODE_87425_length_183_cov_60.020270_g79484_i0reverse_frame_1 - 0.0067 16.3 1.5 0.0097 15.8 1.2 1.6 1 1 0 1 1 1 1 Trefoil (P-type) domain PhoLip_ATPase_N PF16209.5 NODE_87423_length_183_cov_63.256757_g79482_i0reverse_frame_1 - 0.013 15.1 2.1 0.022 14.5 2.1 1.3 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal CP12 PF02672.15 NODE_87419_length_183_cov_75.689189_g79478_i0reverse_frame_1 - 0.034 14.9 0.1 0.043 14.6 0.1 1.2 1 0 0 1 1 1 0 CP12 domain MAM33 PF02330.16 NODE_87410_length_183_cov_105.500000_g79469_i0reverse_frame_1 - 1.2e-10 41.7 0.1 1.4e-10 41.5 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein zf-B_box PF00643.24 NODE_87402_length_183_cov_166.864865_g79461_i0reverse_frame_1 - 0.00024 21.2 6.4 0.00031 20.9 6.4 1.2 1 0 0 1 1 1 1 B-box zinc finger DUF2318 PF10080.9 NODE_87402_length_183_cov_166.864865_g79461_i0reverse_frame_1 - 0.011 15.8 1.8 0.011 15.8 1.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) Zfx_Zfy_act PF04704.13 NODE_87397_length_183_cov_224.574324_g79456_i0forward_frame_1 - 0.014 14.6 0.0 0.015 14.4 0.0 1.0 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region FANCI_HD1 PF14679.6 NODE_87387_length_183_cov_1794.587838_g79446_i0reverse_frame_1 - 0.01 15.8 0.7 0.012 15.6 0.7 1.1 1 0 0 1 1 1 1 FANCI helical domain 1 Enolase_N PF03952.16 NODE_87383_length_184_cov_0.798658_g79442_i0reverse_frame_3 - 2.6e-11 43.8 0.1 3.2e-11 43.5 0.1 1.1 1 0 0 1 1 1 1 Enolase, N-terminal domain Enolase_C PF00113.22 NODE_87383_length_184_cov_0.798658_g79442_i0reverse_frame_3 - 5.6e-06 25.8 0.6 6.9e-06 25.5 0.6 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Lamprin PF06403.11 NODE_87377_length_184_cov_0.832215_g79436_i0forward_frame_2 - 0.55 10.2 3.7 0.71 9.8 3.7 1.4 1 1 0 1 1 1 0 Lamprin Ac76 PF05814.11 NODE_87375_length_184_cov_0.838926_g79434_i0forward_frame_3 - 0.59 10.2 1.7 0.75 9.8 1.7 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) GerPB PF10803.8 NODE_87373_length_184_cov_0.865772_g79432_i0reverse_frame_2 - 0.096 12.8 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 Spore germination GerPB Bunya_G2 PF03563.13 NODE_87370_length_184_cov_0.906040_g79429_i0reverse_frame_3 - 8 5.6 9.1 8.8 5.5 9.1 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 COX7B PF05392.11 NODE_87370_length_184_cov_0.906040_g79429_i0reverse_frame_2 - 0.097 12.4 2.3 0.11 12.2 2.3 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase chain VIIB Cwf_Cwc_15 PF04889.12 NODE_87370_length_184_cov_0.906040_g79429_i0forward_frame_3 - 0.91 9.2 8.9 0.89 9.2 8.9 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Astro_capsid_p PF12226.8 NODE_87370_length_184_cov_0.906040_g79429_i0forward_frame_3 - 2.9 6.9 6.9 2.9 7.0 6.9 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DNA_pol_phi PF04931.13 NODE_87370_length_184_cov_0.906040_g79429_i0forward_frame_3 - 5.1 5.1 8.6 5.8 4.9 8.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi OTT_1508_deam PF14441.6 NODE_87368_length_184_cov_0.919463_g79427_i0reverse_frame_3 - 0.062 13.3 0.3 0.066 13.2 0.3 1.2 1 0 0 1 1 1 0 OTT_1508-like deaminase Atrophin-1 PF03154.15 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_3 - 0.061 11.6 6.1 0.055 11.8 6.1 1.1 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_3 - 0.096 12.7 8.1 0.11 12.5 8.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF2956 PF11169.8 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_3 - 0.98 9.7 3.3 1.1 9.5 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2956) Atrophin-1 PF03154.15 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_2 - 0.086 11.1 2.0 0.085 11.1 2.0 1.1 1 0 0 1 1 1 0 Atrophin-1 family DUF3043 PF11241.8 NODE_87361_length_184_cov_0.939597_g79420_i0reverse_frame_2 - 2.8 7.9 3.6 3 7.9 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) OST3_OST6 PF04756.13 NODE_87361_length_184_cov_0.939597_g79420_i0reverse_frame_2 - 4.1 6.7 6.2 4.6 6.5 6.2 1.0 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Pex24p PF06398.11 NODE_87361_length_184_cov_0.939597_g79420_i0reverse_frame_2 - 7.5 5.4 6.5 8.4 5.3 6.5 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin eIF_4G1 PF12152.8 NODE_87355_length_184_cov_0.993289_g79414_i0reverse_frame_3 - 0.13 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4G1 THAP PF05485.12 NODE_87350_length_184_cov_1.000000_g79409_i0forward_frame_2 - 0.095 13.6 0.2 0.11 13.4 0.2 1.1 1 0 0 1 1 1 0 THAP domain DUF3146 PF11344.8 NODE_87348_length_184_cov_1.006711_g79407_i0reverse_frame_2 - 0.11 12.2 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3146) Gly-zipper_Omp PF13488.6 NODE_87343_length_184_cov_1.046980_g79402_i0forward_frame_3 - 0.11 12.6 10.0 0.67 10.0 4.4 2.1 2 0 0 2 2 2 0 Glycine zipper DUF1269 PF06897.12 NODE_87343_length_184_cov_1.046980_g79402_i0forward_frame_3 - 4.8 7.5 7.7 4.3 7.7 7.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1269) DUF2722 PF10846.8 NODE_87342_length_184_cov_1.046980_g79401_i0reverse_frame_2 - 0.59 9.0 6.1 0.58 9.0 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) Metal_resist PF13801.6 NODE_87340_length_184_cov_1.053691_g79399_i0reverse_frame_3 - 7.4 6.8 6.3 10 6.4 6.3 1.2 1 0 0 1 1 1 0 Heavy-metal resistance NOA36 PF06524.12 NODE_87340_length_184_cov_1.053691_g79399_i0forward_frame_2 - 0.8 9.0 10.0 0.75 9.1 10.0 1.0 1 0 0 1 1 1 0 NOA36 protein CDC45 PF02724.14 NODE_87340_length_184_cov_1.053691_g79399_i0forward_frame_2 - 2.3 6.4 3.9 2 6.6 3.9 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF3290 PF11694.8 NODE_87336_length_184_cov_1.060403_g79395_i0forward_frame_3 - 0.068 13.1 0.5 0.075 13.0 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DUF3592 PF12158.8 NODE_87336_length_184_cov_1.060403_g79395_i0forward_frame_3 - 0.087 12.9 0.0 0.094 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) DUF5432 PF17497.2 NODE_87333_length_184_cov_1.060403_g79392_i0reverse_frame_2 - 0.092 12.9 4.3 0.075 13.1 3.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5432) Mononeg_mRNAcap PF14318.6 NODE_87332_length_184_cov_1.060403_g79391_i0reverse_frame_3 - 0.08 12.2 0.2 0.095 11.9 0.2 1.0 1 0 0 1 1 1 0 Mononegavirales mRNA-capping region V Mlo PF03094.15 NODE_87330_length_184_cov_1.060403_g79389_i0forward_frame_3 - 0.092 11.1 3.4 0.096 11.0 3.4 1.0 1 0 0 1 1 1 0 Mlo family Aldo_ket_red PF00248.21 NODE_87325_length_184_cov_1.067114_g79384_i0forward_frame_2 - 0.0063 15.7 0.0 0.0063 15.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Arm-DNA-bind_3 PF13356.6 NODE_87315_length_184_cov_1.067114_g79374_i0forward_frame_2 - 0.13 12.6 0.9 0.14 12.5 0.9 1.1 1 0 0 1 1 1 0 Arm DNA-binding domain GlgX_C PF18390.1 NODE_87309_length_184_cov_1.067114_g79368_i0forward_frame_3 - 0.095 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme C-terminal domain ER-remodelling PF14755.6 NODE_87308_length_184_cov_1.067114_g79367_i0reverse_frame_3 - 0.0037 17.6 5.0 0.0039 17.5 5.0 1.0 1 0 0 1 1 1 1 Intracellular membrane remodeller EF-hand_9 PF14658.6 NODE_87307_length_184_cov_1.067114_g79366_i0reverse_frame_3 - 0.12 12.7 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain PPV_E2_C PF00511.17 NODE_87302_length_184_cov_1.067114_g79361_i0forward_frame_2 - 0.0093 16.1 0.8 0.013 15.6 0.8 1.2 1 0 0 1 1 1 1 E2 (early) protein, C terminal Peptidase_C2 PF00648.21 NODE_87297_length_184_cov_1.067114_g79356_i0forward_frame_2 - 0.007 15.4 0.1 0.0082 15.2 0.1 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Inhibitor_I78 PF11720.8 NODE_87296_length_184_cov_1.067114_g79355_i0reverse_frame_2 - 0.042 13.9 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase inhibitor I78 family LZ_Tnp_IS481 PF13011.6 NODE_87296_length_184_cov_1.067114_g79355_i0forward_frame_2 - 0.11 13.0 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 GlpM PF06942.12 NODE_87293_length_184_cov_1.067114_g79352_i0forward_frame_3 - 0.056 13.9 1.9 0.058 13.8 1.9 1.0 1 0 0 1 1 1 0 GlpM protein DctM PF06808.12 NODE_87287_length_184_cov_1.073826_g79346_i0forward_frame_3 - 3.9e-12 45.7 1.5 4.1e-12 45.6 1.5 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component DUF4658 PF15555.6 NODE_87285_length_184_cov_1.073826_g79344_i0forward_frame_3 - 0.059 13.5 0.0 0.092 12.9 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4658) Nore1-SARAH PF16517.5 NODE_87277_length_184_cov_1.073826_g79336_i0forward_frame_2 - 0.031 14.2 0.3 1.4 8.8 0.0 2.5 2 1 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Clathrin-link PF09268.10 NODE_87277_length_184_cov_1.073826_g79336_i0forward_frame_2 - 1.4 8.4 3.9 1.1 8.6 1.0 2.4 2 1 0 2 2 2 0 Clathrin, heavy-chain linker DUF1891 PF09004.10 NODE_87274_length_184_cov_1.073826_g79333_i0forward_frame_2 - 0.01 15.4 0.3 0.015 14.9 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1891) COBRA PF04833.15 NODE_87271_length_184_cov_1.073826_g79330_i0reverse_frame_2 - 0.015 15.2 0.1 0.015 15.2 0.1 1.0 1 0 0 1 1 1 0 COBRA-like protein Metallothio_Cad PF07846.11 NODE_87271_length_184_cov_1.073826_g79330_i0forward_frame_2 - 0.14 12.3 0.1 0.25 11.5 0.1 1.4 1 0 0 1 1 1 0 Metallothionein family DUF2024 PF09630.10 NODE_87270_length_184_cov_1.073826_g79329_i0forward_frame_3 - 0.089 12.7 0.2 0.096 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) DUF998 PF06197.13 NODE_87269_length_184_cov_1.073826_g79328_i0forward_frame_3 - 0.077 12.6 0.7 0.086 12.4 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF998) Eclosion PF04736.12 NODE_87262_length_184_cov_1.073826_g79321_i0reverse_frame_3 - 0.077 12.7 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Eclosion hormone Rotavirus_VP1 PF12289.8 NODE_87262_length_184_cov_1.073826_g79321_i0reverse_frame_3 - 0.11 11.5 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP1 C-terminal domain SLC3A2_N PF16028.5 NODE_87262_length_184_cov_1.073826_g79321_i0reverse_frame_3 - 0.11 12.0 2.7 0.5 10.0 0.3 2.0 1 1 1 2 2 2 0 Solute carrier family 3 member 2 N-terminus Pkinase_Tyr PF07714.17 NODE_87259_length_184_cov_1.073826_g79318_i0forward_frame_3 - 0.002 17.5 0.0 0.002 17.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_87259_length_184_cov_1.073826_g79318_i0forward_frame_3 - 0.0083 15.5 0.0 0.0083 15.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain TYA PF01021.19 NODE_87251_length_184_cov_1.073826_g79310_i0reverse_frame_2 - 0.014 15.7 0.2 0.015 15.6 0.2 1.1 1 0 0 1 1 1 0 TYA transposon protein Gryzun-like PF12742.7 NODE_87250_length_184_cov_1.073826_g79309_i0reverse_frame_3 - 0.13 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Gryzun, putative Golgi trafficking Mito_carr PF00153.27 NODE_87245_length_184_cov_1.073826_g79304_i0reverse_frame_3 - 7.6e-07 29.0 0.1 9.6e-07 28.6 0.1 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein SelP_C PF04593.14 NODE_87241_length_184_cov_1.073826_g79300_i0reverse_frame_2 - 0.0088 16.0 0.2 0.0093 16.0 0.2 1.2 1 0 0 1 1 1 1 Selenoprotein P, C terminal region zf-CCHC_3 PF13917.6 NODE_87241_length_184_cov_1.073826_g79300_i0forward_frame_2 - 0.051 13.5 0.2 0.075 13.0 0.2 1.3 1 0 0 1 1 1 0 Zinc knuckle GTA_holin_3TM PF11351.8 NODE_87239_length_184_cov_1.073826_g79298_i0forward_frame_2 - 0.12 12.9 0.9 0.13 12.9 0.9 1.2 1 0 0 1 1 1 0 Holin of 3TMs, for gene-transfer release T2SSF PF00482.23 NODE_87238_length_184_cov_1.073826_g79297_i0reverse_frame_3 - 0.082 12.9 8.2 0.11 12.4 8.2 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F SelP_N PF04592.14 NODE_87238_length_184_cov_1.073826_g79297_i0forward_frame_3 - 0.48 9.8 12.7 0.48 9.8 12.7 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region NicO PF03824.16 NODE_87238_length_184_cov_1.073826_g79297_i0forward_frame_3 - 6.7 6.0 6.6 6.4 6.0 6.6 1.0 1 0 0 1 1 1 0 High-affinity nickel-transport protein Dicty_CAR PF05462.11 NODE_87237_length_184_cov_1.073826_g79296_i0forward_frame_3 - 0.016 14.4 0.7 0.016 14.3 0.7 1.0 1 0 0 1 1 1 0 Slime mold cyclic AMP receptor CysA_C_terminal PF17850.1 NODE_87236_length_184_cov_1.073826_g79295_i0reverse_frame_3 - 0.092 13.3 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 CysA C-terminal regulatory domain XRN_N PF03159.18 NODE_87234_length_184_cov_1.073826_g79293_i0reverse_frame_3 - 0.02 14.3 0.5 0.021 14.3 0.5 1.1 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus IMUP PF15761.5 NODE_87234_length_184_cov_1.073826_g79293_i0reverse_frame_2 - 0.00079 20.1 7.0 0.00087 20.0 7.0 1.1 1 0 0 1 1 1 1 Immortalisation up-regulated protein Herpes_pp85 PF04637.12 NODE_87234_length_184_cov_1.073826_g79293_i0reverse_frame_2 - 0.33 9.3 1.8 0.36 9.2 1.8 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) COQ9 PF08511.11 NODE_87231_length_184_cov_1.073826_g79290_i0reverse_frame_2 - 0.066 13.0 0.0 0.066 13.0 0.0 1.2 1 0 0 1 1 1 0 COQ9 Nodulin_late PF07127.11 NODE_87231_length_184_cov_1.073826_g79290_i0reverse_frame_2 - 0.084 13.2 2.4 0.12 12.8 2.4 1.4 1 1 0 1 1 1 0 Late nodulin protein Pertussis_S2S3 PF02918.15 NODE_87223_length_184_cov_1.073826_g79282_i0reverse_frame_2 - 0.11 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain DUF3515 PF12028.8 NODE_87221_length_184_cov_1.073826_g79280_i0reverse_frame_2 - 0.04 13.6 0.1 0.04 13.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3515) DUF1636 PF07845.11 NODE_87221_length_184_cov_1.073826_g79280_i0forward_frame_2 - 0.014 15.8 0.9 0.015 15.8 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) DUF5527 PF17665.1 NODE_87220_length_184_cov_1.073826_g79279_i0forward_frame_2 - 0.091 12.3 0.1 0.1 12.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5527) MMADHC PF10229.9 NODE_87213_length_184_cov_1.073826_g79272_i0reverse_frame_3 - 0.053 13.3 0.0 0.062 13.0 0.0 1.0 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein zf-Di19 PF05605.12 NODE_87209_length_184_cov_1.073826_g79268_i0reverse_frame_3 - 0.11 12.8 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Plasmod_dom_1 PF09715.10 NODE_87205_length_184_cov_1.100671_g79264_i0reverse_frame_2 - 0.075 13.1 1.0 0.15 12.1 1.0 1.5 1 1 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) DUF5399 PF17377.2 NODE_87203_length_184_cov_1.107383_g79262_i0forward_frame_3 - 0.021 14.6 0.0 0.023 14.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5399) Herpes_gE PF02480.16 NODE_87189_length_184_cov_1.167785_g79248_i0forward_frame_2 - 0.058 12.1 0.7 0.058 12.1 0.7 1.0 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E VWA_N2 PF16164.5 NODE_87188_length_184_cov_1.167785_g79247_i0reverse_frame_2 - 0.058 13.5 0.0 0.077 13.1 0.0 1.2 1 0 0 1 1 1 0 VWA N-terminal Auxin_canalis PF05703.11 NODE_87178_length_184_cov_1.194631_g79237_i0forward_frame_3 - 0.036 14.0 0.1 0.038 13.9 0.1 1.0 1 0 0 1 1 1 0 Auxin canalisation SSI PF00720.17 NODE_87167_length_184_cov_1.255034_g79226_i0reverse_frame_2 - 0.02 14.8 0.2 0.021 14.7 0.2 1.1 1 0 0 1 1 1 0 Subtilisin inhibitor-like rve PF00665.26 NODE_87167_length_184_cov_1.255034_g79226_i0forward_frame_2 - 0.046 13.9 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain BRD4_CDT PF17105.5 NODE_87167_length_184_cov_1.255034_g79226_i0forward_frame_2 - 0.052 13.2 0.0 0.076 12.6 0.0 1.2 1 0 0 1 1 1 0 C-terminal domain of bromodomain protein 4 Tubulin PF00091.25 NODE_87166_length_184_cov_1.255034_g79225_i0reverse_frame_2 - 3.9e-08 33.7 0.0 4.2e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain LAB_N PF07578.11 NODE_87162_length_184_cov_1.268456_g79221_i0reverse_frame_3 - 0.094 12.8 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain PXB PF12828.7 NODE_87161_length_184_cov_1.268456_g79220_i0forward_frame_2 - 0.078 13.0 0.1 0.08 12.9 0.1 1.1 1 0 0 1 1 1 0 PX-associated DUF222 PF02720.17 NODE_87158_length_184_cov_1.268456_g79217_i0forward_frame_2 - 0.089 12.3 0.1 0.093 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF222) DUF5352 PF17303.2 NODE_87152_length_184_cov_1.281879_g79211_i0forward_frame_3 - 0.0029 17.5 0.0 0.0032 17.4 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5352) Requiem_N PF14051.6 NODE_87150_length_184_cov_1.308725_g79209_i0forward_frame_3 - 0.083 13.1 0.1 0.1 12.8 0.1 1.1 1 0 0 1 1 1 0 N-terminal domain of DPF2/REQ. Pyr_redox_2 PF07992.14 NODE_87142_length_184_cov_1.335570_g79201_i0reverse_frame_3 - 1.4e-07 31.1 0.0 1.4e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_87142_length_184_cov_1.335570_g79201_i0reverse_frame_3 - 3.5e-05 24.3 1.2 4.8e-05 23.8 1.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GA-like PF17573.2 NODE_87142_length_184_cov_1.335570_g79201_i0reverse_frame_3 - 0.15 12.0 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 GA-like domain SecIII_SopE_N PF05364.14 NODE_87142_length_184_cov_1.335570_g79201_i0forward_frame_3 - 0.097 12.8 0.1 0.17 11.9 0.1 1.4 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus DUF3916 PF13079.6 NODE_87136_length_184_cov_1.335570_g79195_i0reverse_frame_3 - 0.06 13.2 2.1 0.06 13.2 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) DUF643 PF04867.12 NODE_87136_length_184_cov_1.335570_g79195_i0forward_frame_3 - 0.00065 20.3 1.7 0.00074 20.1 1.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF643) Pkinase PF00069.25 NODE_87135_length_184_cov_1.335570_g79194_i0reverse_frame_2 - 9.6e-08 31.7 0.0 1e-07 31.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain UPF0203 PF05254.12 NODE_87133_length_184_cov_1.342282_g79192_i0reverse_frame_3 - 0.098 12.9 0.2 0.1 12.9 0.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF2259 PF10016.9 NODE_87129_length_184_cov_1.342282_g79188_i0reverse_frame_3 - 0.28 11.1 3.3 0.3 11.0 3.3 1.0 1 0 0 1 1 1 0 Predicted secreted protein (DUF2259) VGCC_beta4Aa_N PF12052.8 NODE_87129_length_184_cov_1.342282_g79188_i0reverse_frame_3 - 1.1 9.4 13.6 0.27 11.4 2.9 2.3 2 0 0 2 2 2 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal PIP49_N PF14875.6 NODE_87122_length_184_cov_1.362416_g79181_i0reverse_frame_3 - 0.057 13.3 0.1 0.059 13.2 0.1 1.1 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 TRP_2 PF08344.11 NODE_87120_length_184_cov_1.362416_g79179_i0reverse_frame_3 - 0.11 12.8 0.7 0.14 12.4 0.7 1.2 1 0 0 1 1 1 0 Transient receptor ion channel II IspD PF01128.19 NODE_87120_length_184_cov_1.362416_g79179_i0forward_frame_3 - 0.0021 17.8 0.0 0.0024 17.6 0.0 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF1281 PF06924.11 NODE_87119_length_184_cov_1.362416_g79178_i0forward_frame_2 - 0.11 12.0 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) Histone_H2A_C PF16211.5 NODE_87118_length_184_cov_1.375839_g79177_i0forward_frame_3 - 0.12 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Scs3p PF10261.9 NODE_87118_length_184_cov_1.375839_g79177_i0forward_frame_2 - 0.011 15.2 1.0 0.012 15.1 1.0 1.1 1 0 0 1 1 1 0 Inositol phospholipid synthesis and fat-storage-inducing TM NAAA-beta PF15508.6 NODE_87116_length_184_cov_1.382550_g79175_i0forward_frame_2 - 0.072 13.4 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase GST_N_2 PF13409.6 NODE_87113_length_184_cov_1.409396_g79172_i0reverse_frame_2 - 0.087 13.1 0.0 0.098 13.0 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain RVT_1 PF00078.27 NODE_87107_length_184_cov_1.429530_g79166_i0forward_frame_2 - 0.00064 19.3 0.1 0.00065 19.3 0.1 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF2695 PF10905.8 NODE_87104_length_184_cov_1.449664_g79163_i0reverse_frame_2 - 0.005 17.0 0.6 0.76 10.1 0.1 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF2695) Defensin_int PF17858.1 NODE_87101_length_184_cov_1.476510_g79160_i0forward_frame_2 - 0.002 18.0 0.9 0.003 17.5 0.9 1.4 1 0 0 1 1 1 1 Platypus intermediate defensin-like peptide zf-CCCH PF00642.24 NODE_87101_length_184_cov_1.476510_g79160_i0forward_frame_2 - 0.8 9.7 4.9 0.41 10.6 1.3 2.0 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Ubie_methyltran PF01209.18 NODE_87100_length_184_cov_1.483221_g79159_i0forward_frame_3 - 0.0015 17.9 0.0 0.0015 17.9 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 NODE_87100_length_184_cov_1.483221_g79159_i0forward_frame_3 - 0.0022 18.6 0.0 0.0022 18.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_87100_length_184_cov_1.483221_g79159_i0forward_frame_3 - 0.012 16.3 0.0 0.012 16.3 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Transketolase_N PF00456.21 NODE_87098_length_184_cov_1.496644_g79157_i0reverse_frame_3 - 0.14 11.1 0.0 0.14 11.0 0.0 1.0 1 0 0 1 1 1 0 Transketolase, thiamine diphosphate binding domain Chromo PF00385.24 NODE_87088_length_184_cov_1.550336_g79147_i0reverse_frame_3 - 0.016 15.1 2.9 0.025 14.5 2.9 1.3 1 0 0 1 1 1 0 Chromo (CHRromatin Organisation MOdifier) domain VP7 PF00434.18 NODE_87088_length_184_cov_1.550336_g79147_i0forward_frame_3 - 0.071 12.2 5.7 0.084 12.0 5.7 1.1 1 0 0 1 1 1 0 Glycoprotein VP7 COE1_DBD PF16422.5 NODE_87084_length_184_cov_1.557047_g79143_i0forward_frame_3 - 0.032 13.7 0.6 0.034 13.6 0.6 1.0 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain UvrA_DNA-bind PF17755.1 NODE_87083_length_184_cov_1.557047_g79142_i0reverse_frame_2 - 0.13 12.6 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 UvrA DNA-binding domain DUF5340 PF17275.2 NODE_87079_length_184_cov_1.563758_g79138_i0reverse_frame_3 - 0.051 13.7 0.2 0.055 13.6 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5340) ATG11 PF10377.9 NODE_87076_length_184_cov_1.583893_g79135_i0forward_frame_3 - 0.064 13.3 0.0 0.064 13.3 0.0 1.1 1 0 0 1 1 1 0 Autophagy-related protein 11 DUF92 PF01940.16 NODE_87074_length_184_cov_1.583893_g79133_i0reverse_frame_3 - 0.081 12.3 0.0 0.084 12.3 0.0 1.0 1 0 0 1 1 1 0 Integral membrane protein DUF92 XAF1_C PF18608.1 NODE_87074_length_184_cov_1.583893_g79133_i0reverse_frame_2 - 0.0011 18.4 0.3 0.0016 18.0 0.3 1.2 1 0 0 1 1 1 1 XIAP-associated factor 1 C-terminal domain zf_UBZ PF18439.1 NODE_87074_length_184_cov_1.583893_g79133_i0reverse_frame_2 - 0.023 14.3 0.2 0.023 14.3 0.2 1.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger SpoVAC_SpoVAEB PF03862.13 NODE_87073_length_184_cov_1.590604_g79132_i0forward_frame_2 - 0.062 13.6 0.3 0.068 13.5 0.3 1.1 1 0 0 1 1 1 0 SpoVAC/SpoVAEB sporulation membrane protein MFS_1 PF07690.16 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 3e-05 23.1 0.5 3e-05 23.1 0.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 0.0032 15.8 0.6 0.0032 15.8 0.6 1.0 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family Sugar_tr PF00083.24 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 0.0043 16.0 0.2 0.0045 15.9 0.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.6 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 0.011 14.4 0.5 0.011 14.3 0.5 1.0 1 0 0 1 1 1 0 MFS/sugar transport protein Pox_A14 PF05767.12 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_2 - 0.0063 16.6 0.2 0.0063 16.6 0.2 1.1 1 0 0 1 1 1 1 Poxvirus virion envelope protein A14 SAMP PF05924.11 NODE_87056_length_184_cov_1.610738_g79115_i0forward_frame_2 - 0.17 11.2 0.1 0.17 11.2 0.1 2.0 2 0 0 2 2 2 0 SAMP Motif ABC_membrane PF00664.23 NODE_87049_length_184_cov_1.610738_g79108_i0forward_frame_2 - 0.019 14.6 0.0 0.024 14.3 0.0 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region Propeptide_C1 PF08127.13 NODE_87048_length_184_cov_1.610738_g79107_i0reverse_frame_2 - 0.14 12.0 0.1 0.17 11.8 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C1 propeptide MGC-24 PF05283.11 NODE_87046_length_184_cov_1.610738_g79105_i0reverse_frame_2 - 0.15 12.5 0.5 0.16 12.4 0.5 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF5601 PF18151.1 NODE_87045_length_184_cov_1.610738_g79104_i0reverse_frame_3 - 0.035 14.4 0.4 0.044 14.1 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5601) FliT PF05400.13 NODE_87045_length_184_cov_1.610738_g79104_i0reverse_frame_3 - 0.078 13.8 0.4 0.096 13.5 0.3 1.3 1 1 0 1 1 1 0 Flagellar protein FliT DUF3439 PF11921.8 NODE_87044_length_184_cov_1.610738_g79103_i0forward_frame_2 - 0.075 13.0 0.3 0.097 12.6 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) HET-s_218-289 PF11558.8 NODE_87040_length_184_cov_1.644295_g79099_i0forward_frame_2 - 0.08 13.0 0.0 0.15 12.1 0.0 1.4 2 0 0 2 2 2 0 Het-s 218-289 PsiB PF06290.11 NODE_87037_length_184_cov_1.664430_g79096_i0forward_frame_3 - 0.013 15.0 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) FATC PF02260.20 NODE_87033_length_184_cov_1.711409_g79092_i0reverse_frame_2 - 0.087 12.7 0.3 0.17 11.7 0.1 1.6 2 0 0 2 2 2 0 FATC domain Tombus_movement PF05318.12 NODE_87028_length_184_cov_1.731544_g79087_i0reverse_frame_2 - 0.12 13.2 7.0 0.32 11.8 7.0 1.8 1 1 0 1 1 1 0 Tombusvirus movement protein DUF5576 PF17739.1 NODE_87025_length_184_cov_1.751678_g79084_i0reverse_frame_3 - 0.35 11.0 3.1 0.11 12.6 0.6 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5576) RGS12_us2 PF16611.5 NODE_87023_length_184_cov_1.765101_g79082_i0forward_frame_3 - 0.091 13.2 0.1 0.1 13.0 0.1 1.2 1 0 0 1 1 1 0 Unstructured region between RBD and GoLoco # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks412.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks412.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks412.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks412.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:31:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UCH PF00443.29 NODE_87016_length_184_cov_1.818792_g79075_i0forward_frame_2 - 0.011 15.3 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Chitin_synth_1 PF01644.17 NODE_87015_length_184_cov_1.825503_g79074_i0forward_frame_2 - 5.7e-15 55.7 0.0 5.7e-15 55.7 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase HU-CCDC81_euk_2 PF18289.1 NODE_87013_length_184_cov_1.838926_g79072_i0reverse_frame_3 - 0.0041 17.3 0.0 0.0054 16.9 0.0 1.1 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 Annexin PF00191.20 NODE_87008_length_184_cov_1.865772_g79067_i0reverse_frame_2 - 0.18 11.9 0.0 0.23 11.6 0.0 1.1 1 0 0 1 1 1 0 Annexin Avl9 PF09794.9 NODE_87007_length_184_cov_1.872483_g79066_i0reverse_frame_3 - 1e-11 44.2 0.0 1.1e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Transport protein Avl9 Afi1 PF07792.12 NODE_87007_length_184_cov_1.872483_g79066_i0reverse_frame_3 - 7.7e-06 26.4 0.0 8.4e-06 26.3 0.0 1.0 1 0 0 1 1 1 1 Docking domain of Afi1 for Arf3 in vesicle trafficking DUF2347 PF09804.9 NODE_87007_length_184_cov_1.872483_g79066_i0reverse_frame_3 - 0.085 12.4 0.0 0.089 12.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2347) APG17 PF04108.12 NODE_87006_length_184_cov_1.872483_g79065_i0forward_frame_3 - 0.017 14.2 0.1 0.017 14.2 0.1 1.0 1 0 0 1 1 1 0 Autophagy protein Apg17 MbeB_N PF04837.12 NODE_87006_length_184_cov_1.872483_g79065_i0forward_frame_3 - 0.025 14.9 0.6 0.035 14.4 0.6 1.1 1 0 0 1 1 1 0 MbeB-like, N-term conserved region Med8 PF10232.9 NODE_87006_length_184_cov_1.872483_g79065_i0forward_frame_3 - 0.076 12.6 0.1 0.085 12.4 0.1 1.1 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 Ion_trans_2 PF07885.16 NODE_87004_length_184_cov_1.879195_g79063_i0forward_frame_2 - 2.8e-11 43.2 5.6 3e-11 43.1 5.6 1.0 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 NODE_87004_length_184_cov_1.879195_g79063_i0forward_frame_2 - 0.0014 17.9 1.9 0.0014 17.9 1.9 1.0 1 0 0 1 1 1 1 Ion transport protein DUF4902 PF16245.5 NODE_87003_length_184_cov_1.879195_g79062_i0reverse_frame_2 - 0.03 14.2 0.0 0.03 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4902) Cir_N PF10197.9 NODE_87001_length_184_cov_1.932886_g79060_i0reverse_frame_3 - 0.022 15.0 0.8 0.03 14.5 0.4 1.6 2 0 0 2 2 2 0 N-terminal domain of CBF1 interacting co-repressor CIR DUF3116 PF11313.8 NODE_87000_length_184_cov_1.939597_g79059_i0reverse_frame_2 - 0.049 13.5 0.0 0.052 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) p450 PF00067.22 NODE_86996_length_184_cov_1.973154_g79055_i0reverse_frame_3 - 0.0044 15.8 0.1 0.0045 15.8 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 GET2 PF08690.10 NODE_86996_length_184_cov_1.973154_g79055_i0forward_frame_3 - 0.25 11.0 0.7 0.27 10.9 0.7 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 OmpW PF03922.14 NODE_86994_length_184_cov_1.986577_g79053_i0reverse_frame_3 - 5.7e-22 78.5 0.1 6.1e-22 78.4 0.1 1.0 1 0 0 1 1 1 1 OmpW family OprF PF05736.11 NODE_86994_length_184_cov_1.986577_g79053_i0reverse_frame_3 - 0.014 15.2 0.0 0.015 15.1 0.0 1.1 1 0 0 1 1 1 0 OprF membrane domain Phage_T4_Gp30_7 PF06919.11 NODE_86994_length_184_cov_1.986577_g79053_i0forward_frame_2 - 0.071 13.3 0.0 0.084 13.0 0.0 1.1 1 0 0 1 1 1 0 Phage Gp30.7 protein Cas_Csy1 PF09611.10 NODE_86992_length_184_cov_2.000000_g79051_i0reverse_frame_3 - 0.17 10.9 0.2 0.15 11.1 0.2 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) DUF5409 PF17421.2 NODE_86991_length_184_cov_2.013423_g79050_i0reverse_frame_3 - 0.033 14.9 0.4 0.037 14.7 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) MFS_1 PF07690.16 NODE_86990_length_184_cov_2.013423_g79049_i0reverse_frame_3 - 0.00054 19.0 2.4 0.00055 19.0 2.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3792 PF12670.7 NODE_86990_length_184_cov_2.013423_g79049_i0reverse_frame_3 - 0.37 11.0 8.6 0.81 9.9 4.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3792) CK_II_beta PF01214.18 NODE_86989_length_184_cov_2.020134_g79048_i0reverse_frame_3 - 5.2e-05 23.1 2.2 5.5e-05 23.1 2.2 1.0 1 0 0 1 1 1 1 Casein kinase II regulatory subunit zf-HC5HC2H PF13771.6 NODE_86989_length_184_cov_2.020134_g79048_i0reverse_frame_3 - 0.0003 21.0 3.3 0.00044 20.5 3.4 1.3 1 1 0 1 1 1 1 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 NODE_86989_length_184_cov_2.020134_g79048_i0reverse_frame_3 - 0.00043 20.4 1.9 0.00068 19.8 2.0 1.3 1 1 0 1 1 1 1 PHD-zinc-finger like domain zf-RING_2 PF13639.6 NODE_86989_length_184_cov_2.020134_g79048_i0reverse_frame_3 - 0.025 14.9 3.6 0.031 14.6 3.6 1.2 1 0 0 1 1 1 0 Ring finger domain DUF4141 PF13605.6 NODE_86988_length_184_cov_2.040268_g79047_i0reverse_frame_2 - 0.088 12.1 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4141) GreA_GreB PF01272.19 NODE_86982_length_184_cov_2.120805_g79041_i0reverse_frame_2 - 0.064 13.2 0.0 0.085 12.8 0.0 1.2 1 0 0 1 1 1 0 Transcription elongation factor, GreA/GreB, C-term DUF1514 PF07438.11 NODE_86974_length_184_cov_2.147651_g79033_i0forward_frame_3 - 0.11 12.3 0.1 0.14 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1514) Kunitz_legume PF00197.18 NODE_86970_length_184_cov_2.167785_g79029_i0reverse_frame_2 - 0.0081 16.1 0.0 0.0087 16.0 0.0 1.0 1 0 0 1 1 1 1 Trypsin and protease inhibitor Sorb PF02208.16 NODE_86969_length_184_cov_2.167785_g79028_i0reverse_frame_2 - 0.099 12.5 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 Sorbin homologous domain EMP70 PF02990.16 NODE_86968_length_184_cov_2.174497_g79027_i0reverse_frame_2 - 2.3 6.8 5.3 2.5 6.7 5.3 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 DUF536 PF04394.14 NODE_86963_length_184_cov_2.255034_g79022_i0reverse_frame_3 - 0.14 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF536 DUF1932 PF09130.11 NODE_86961_length_184_cov_2.255034_g79020_i0forward_frame_3 - 0.013 15.5 0.1 0.016 15.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) LAX PF15681.5 NODE_86958_length_184_cov_2.308725_g79017_i0reverse_frame_2 - 0.081 11.7 2.3 0.093 11.5 2.3 1.0 1 0 0 1 1 1 0 Lymphocyte activation family X PrgI PF12666.7 NODE_86958_length_184_cov_2.308725_g79017_i0reverse_frame_2 - 0.8 10.5 8.5 0.89 10.3 8.5 1.1 1 0 0 1 1 1 0 PrgI family protein S_4TM PF18159.1 NODE_86958_length_184_cov_2.308725_g79017_i0reverse_frame_2 - 8.3 5.6 7.5 9.3 5.5 7.5 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain PIG-U PF06728.13 NODE_86958_length_184_cov_2.308725_g79017_i0forward_frame_3 - 0.025 13.6 1.1 0.025 13.7 1.1 1.0 1 0 0 1 1 1 0 GPI transamidase subunit PIG-U Mucin PF01456.17 NODE_86958_length_184_cov_2.308725_g79017_i0forward_frame_2 - 0.14 12.2 30.4 0.14 12.1 30.4 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF1702 PF08012.11 NODE_86958_length_184_cov_2.308725_g79017_i0forward_frame_2 - 2.8 6.7 8.0 3 6.6 8.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1702) NOD2_WH PF17779.1 NODE_86956_length_184_cov_2.348993_g79015_i0forward_frame_2 - 0.069 13.5 0.0 0.089 13.1 0.0 1.2 1 0 0 1 1 1 0 NOD2 winged helix domain Vps35 PF03635.17 NODE_86948_length_184_cov_2.416107_g79007_i0reverse_frame_2 - 4.9e-08 32.0 0.5 5e-08 32.0 0.5 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 V-ATPase_H_N PF03224.14 NODE_86948_length_184_cov_2.416107_g79007_i0reverse_frame_2 - 0.004 16.5 0.7 0.0047 16.3 0.7 1.0 1 0 0 1 1 1 1 V-ATPase subunit H Rep_2 PF01719.17 NODE_86947_length_184_cov_2.436242_g79006_i0reverse_frame_3 - 0.012 15.4 0.3 0.012 15.4 0.3 1.1 1 0 0 1 1 1 0 Plasmid replication protein Transposase_22 PF02994.14 NODE_86947_length_184_cov_2.436242_g79006_i0reverse_frame_3 - 0.042 14.0 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 L1 transposable element RBD-like domain DUF692 PF05114.13 NODE_86945_length_184_cov_2.449664_g79004_i0reverse_frame_2 - 0.019 14.2 0.0 0.022 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF692) FerA PF08165.11 NODE_86945_length_184_cov_2.449664_g79004_i0reverse_frame_2 - 0.087 12.8 0.2 0.11 12.5 0.2 1.3 1 0 0 1 1 1 0 FerA (NUC095) domain SWIRM-assoc_2 PF16496.5 NODE_86942_length_184_cov_2.489933_g79001_i0forward_frame_3 - 0.032 13.1 5.7 0.03 13.2 5.7 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal DUF2457 PF10446.9 NODE_86942_length_184_cov_2.489933_g79001_i0forward_frame_3 - 0.91 8.6 7.5 0.88 8.7 7.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) RbpA PF13397.6 NODE_86939_length_184_cov_2.557047_g78998_i0reverse_frame_3 - 0.14 12.8 0.1 0.15 12.7 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase-binding protein TRIQK PF15168.6 NODE_86939_length_184_cov_2.557047_g78998_i0reverse_frame_3 - 0.16 11.8 2.1 0.2 11.6 2.1 1.0 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family Pkinase PF00069.25 NODE_86937_length_184_cov_2.624161_g78996_i0forward_frame_3 - 0.012 15.0 0.0 0.012 15.0 0.0 1.0 1 0 0 1 1 1 0 Protein kinase domain HV_small_capsid PF17086.5 NODE_86936_length_184_cov_2.624161_g78995_i0reverse_frame_3 - 0.17 12.2 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 Small capsid protein of Herpesviridae Folate_carrier PF01770.18 NODE_86933_length_184_cov_2.677852_g78992_i0reverse_frame_3 - 0.13 10.9 0.0 0.13 10.9 0.0 1.0 1 0 0 1 1 1 0 Reduced folate carrier PLD_C PF12357.8 NODE_86931_length_184_cov_2.684564_g78990_i0forward_frame_3 - 0.18 11.8 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Phospholipase D C terminal Prim_Zn_Ribbon PF08273.12 NODE_86931_length_184_cov_2.684564_g78990_i0forward_frame_2 - 0.045 14.0 0.9 0.074 13.3 0.9 1.4 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase LysR_substrate PF03466.20 NODE_86925_length_184_cov_2.818792_g78984_i0reverse_frame_3 - 4.2e-09 36.1 0.0 4.6e-09 35.9 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Kelch_5 PF13854.6 NODE_86923_length_184_cov_2.885906_g78982_i0reverse_frame_2 - 4e-05 23.5 0.0 4.9e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 NODE_86923_length_184_cov_2.885906_g78982_i0reverse_frame_2 - 0.0026 18.0 0.0 0.003 17.8 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 NODE_86923_length_184_cov_2.885906_g78982_i0reverse_frame_2 - 0.008 16.2 0.0 0.0099 15.9 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_86923_length_184_cov_2.885906_g78982_i0reverse_frame_2 - 0.088 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Kelch motif DUF1899 PF08953.11 NODE_86922_length_184_cov_2.899329_g78981_i0reverse_frame_2 - 0.14 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1899) ThrE_2 PF12821.7 NODE_86921_length_184_cov_2.912752_g78980_i0forward_frame_3 - 0.034 14.3 0.7 0.037 14.2 0.7 1.1 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE Lamprin PF06403.11 NODE_86919_length_184_cov_3.060403_g78978_i0forward_frame_3 - 0.46 10.4 9.2 1.3 8.9 9.2 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_86919_length_184_cov_3.060403_g78978_i0forward_frame_2 - 0.29 11.1 7.6 0.73 9.8 7.6 1.6 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_86914_length_184_cov_3.214765_g78973_i0reverse_frame_3 - 0.0035 17.3 0.6 0.0038 17.2 0.6 1.0 1 0 0 1 1 1 1 Lamprin PTS_IIB PF02302.17 NODE_86910_length_184_cov_4.013423_g78969_i0reverse_frame_2 - 0.00012 22.7 0.6 0.00038 21.1 0.1 1.8 2 0 0 2 2 2 1 PTS system, Lactose/Cellobiose specific IIB subunit Xan_ur_permease PF00860.20 NODE_86909_length_184_cov_4.201342_g78968_i0forward_frame_2 - 7.1e-11 41.4 1.4 7.5e-11 41.3 1.4 1.0 1 0 0 1 1 1 1 Permease family Mit_KHE1 PF10173.9 NODE_86903_length_184_cov_7.516779_g78962_i0forward_frame_2 - 0.2 11.7 0.2 0.26 11.3 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Tetraspanin PF00335.20 NODE_86902_length_184_cov_8.718121_g78961_i0reverse_frame_3 - 0.31 10.7 5.5 0.34 10.6 5.5 1.0 1 0 0 1 1 1 0 Tetraspanin family SR-25 PF10500.9 NODE_86902_length_184_cov_8.718121_g78961_i0forward_frame_3 - 2.1 7.9 15.9 2.2 7.8 15.9 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein EphA2_TM PF14575.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_2 - 0.07 14.0 3.7 0.09 13.7 3.7 1.3 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Tmemb_9 PF05434.11 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_2 - 0.76 9.7 5.4 0.71 9.8 5.4 1.1 1 0 0 1 1 1 0 TMEM9 DUF5305 PF17231.2 NODE_86900_length_184_cov_12.006711_g78959_i0forward_frame_3 - 0.16 11.4 2.9 0.17 11.3 2.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) SSP160 PF06933.11 NODE_86900_length_184_cov_12.006711_g78959_i0forward_frame_3 - 0.68 8.1 19.5 0.77 7.9 19.5 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF4871 PF16167.5 NODE_86900_length_184_cov_12.006711_g78959_i0forward_frame_3 - 9.7 6.2 7.3 12 6.0 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) DUF4795 PF16043.5 NODE_86899_length_184_cov_12.335570_g78958_i0reverse_frame_2 - 0.033 13.8 4.9 0.034 13.7 4.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF4298 PF14131.6 NODE_86899_length_184_cov_12.335570_g78958_i0reverse_frame_2 - 0.18 11.8 3.6 0.2 11.6 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Spin-Ssty PF02513.17 NODE_86898_length_184_cov_13.852349_g78957_i0reverse_frame_3 - 0.055 13.2 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Spin/Ssty Family 2TM PF13239.6 NODE_86898_length_184_cov_13.852349_g78957_i0forward_frame_2 - 5.6 7.3 11.7 7.1 7.0 11.7 1.1 1 0 0 1 1 1 0 2TM domain DUF4648 PF15505.6 NODE_86897_length_184_cov_14.161074_g78956_i0reverse_frame_3 - 0.029 15.2 0.0 0.045 14.6 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4648) DUF2724 PF10893.8 NODE_86897_length_184_cov_14.161074_g78956_i0reverse_frame_3 - 0.091 12.6 0.9 0.12 12.2 0.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2724) Inhibitor_I68 PF10468.9 NODE_86895_length_184_cov_16.476510_g78954_i0forward_frame_2 - 0.0037 17.6 0.2 0.0037 17.6 0.2 1.1 1 0 0 1 1 1 1 Carboxypeptidase inhibitor I68 Rrn6 PF10214.9 NODE_86887_length_184_cov_20.751678_g78946_i0reverse_frame_3 - 7.8 4.9 11.4 8.1 4.8 11.4 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor CMS1 PF14617.6 NODE_86887_length_184_cov_20.751678_g78946_i0reverse_frame_2 - 0.05 12.9 3.5 0.057 12.8 3.5 1.0 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit OAD_gamma PF04277.13 NODE_86887_length_184_cov_20.751678_g78946_i0reverse_frame_2 - 2.1 9.0 4.1 2.4 8.8 4.1 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Pkinase_Tyr PF07714.17 NODE_86876_length_184_cov_30.000000_g78935_i0reverse_frame_3 - 0.0038 16.6 0.2 0.0039 16.5 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_86876_length_184_cov_30.000000_g78935_i0reverse_frame_3 - 0.14 11.5 0.2 0.16 11.3 0.2 1.0 1 0 0 1 1 1 0 Protein kinase domain DUF2768 PF10966.8 NODE_86869_length_184_cov_32.208054_g78928_i0reverse_frame_3 - 0.0016 18.9 1.2 0.002 18.5 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2768) Virulence_fact PF13769.6 NODE_86865_length_184_cov_33.429530_g78924_i0forward_frame_2 - 0.072 13.3 0.5 0.092 13.0 0.5 1.3 1 0 0 1 1 1 0 Virulence factor YMF19 PF02326.15 NODE_86861_length_184_cov_35.536913_g78920_i0reverse_frame_3 - 0.75 10.6 5.5 0.83 10.5 5.5 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 Tetraspanin PF00335.20 NODE_86861_length_184_cov_35.536913_g78920_i0reverse_frame_3 - 1.3 8.7 6.3 1.2 8.8 6.3 1.1 1 0 0 1 1 1 0 Tetraspanin family Babuvirus_MP PF07234.11 NODE_86861_length_184_cov_35.536913_g78920_i0reverse_frame_3 - 1.6 8.9 5.9 1.6 8.9 5.9 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF4834 PF16118.5 NODE_86861_length_184_cov_35.536913_g78920_i0reverse_frame_3 - 4.9 8.2 6.8 4.7 8.2 6.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) TFIIF_alpha PF05793.12 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 1.2 7.7 19.0 1.2 7.6 19.0 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) FAM176 PF14851.6 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 1.2 8.8 11.8 1.3 8.7 11.8 1.2 1 0 0 1 1 1 0 FAM176 family PBP1_TM PF14812.6 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 1.4 9.3 16.7 1.7 9.1 16.7 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal NOA36 PF06524.12 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 1.9 7.8 14.9 2.1 7.6 14.9 1.0 1 0 0 1 1 1 0 NOA36 protein Coilin_N PF15862.5 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 3.3 7.5 14.4 3.9 7.3 14.4 1.0 1 0 0 1 1 1 0 Coilin N-terminus PBP_sp32 PF07222.12 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 5.9 6.3 12.0 7 6.0 12.0 1.0 1 0 0 1 1 1 0 Proacrosin binding protein sp32 NOT2_3_5 PF04153.18 NODE_86860_length_184_cov_35.543624_g78919_i0reverse_frame_2 - 0.11 12.5 0.6 0.13 12.4 0.6 1.1 1 0 0 1 1 1 0 NOT2 / NOT3 / NOT5 family RNA_pol_Rpb1_1 PF04997.12 NODE_86859_length_184_cov_36.919463_g78918_i0forward_frame_3 - 0.2 10.9 0.0 0.25 10.6 0.0 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 1 RTA1 PF04479.13 NODE_86857_length_184_cov_37.677852_g78916_i0forward_frame_2 - 0.056 13.1 0.0 0.056 13.0 0.0 1.0 1 0 0 1 1 1 0 RTA1 like protein Herpes_UL79 PF03049.14 NODE_86849_length_184_cov_44.375839_g78908_i0forward_frame_3 - 0.099 12.3 0.1 0.1 12.2 0.1 1.0 1 0 0 1 1 1 0 UL79 family DUF639 PF04842.12 NODE_86843_length_184_cov_55.355705_g78902_i0reverse_frame_3 - 0.09 12.2 0.1 0.1 12.0 0.1 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) SNARE PF05739.19 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 1.2e-05 25.2 1.1 1.9e-05 24.5 1.1 1.4 1 0 0 1 1 1 1 SNARE domain RIFIN PF02009.16 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.016 15.2 2.3 0.016 15.1 2.3 1.0 1 0 0 1 1 1 0 Rifin Synaptobrevin PF00957.21 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.06 13.2 2.3 0.075 12.8 2.3 1.1 1 0 0 1 1 1 0 Synaptobrevin DUF2207 PF09972.9 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.11 11.2 0.2 0.11 11.2 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Chordopox_A13L PF05961.11 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.16 12.2 3.5 0.21 11.8 3.5 1.2 1 0 0 1 1 1 0 Chordopoxvirus A13L protein TMEM154 PF15102.6 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.2 11.5 0.4 0.2 11.6 0.4 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF2975 PF11188.8 NODE_86836_length_184_cov_63.926174_g78895_i0forward_frame_2 - 0.17 11.8 0.5 0.17 11.7 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) Endotoxin_C2 PF18449.1 NODE_86835_length_184_cov_65.348993_g78894_i0reverse_frame_3 - 0.042 14.2 0.0 0.054 13.8 0.0 1.1 1 0 0 1 1 1 0 Delta endotoxin DNA_pol3_delta2 PF13177.6 NODE_86831_length_184_cov_79.208054_g78890_i0reverse_frame_3 - 0.17 11.7 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III, delta subunit TOBE PF03459.17 NODE_86830_length_184_cov_80.328859_g78889_i0forward_frame_3 - 0.02 15.2 0.0 0.029 14.7 0.0 1.2 1 0 0 1 1 1 0 TOBE domain YqzE PF14038.6 NODE_86829_length_184_cov_88.959732_g78888_i0forward_frame_3 - 0.091 12.8 2.3 0.14 12.2 2.3 1.3 1 0 0 1 1 1 0 YqzE-like protein RCDG1 PF15725.5 NODE_86825_length_184_cov_111.201342_g78884_i0reverse_frame_2 - 0.35 11.3 9.0 0.39 11.2 8.6 1.4 1 1 0 1 1 1 0 Renal cancer differentiation gene 1 protein KH_1 PF00013.29 NODE_86825_length_184_cov_111.201342_g78884_i0forward_frame_2 - 0.006 16.4 0.1 0.0071 16.2 0.1 1.1 1 0 0 1 1 1 1 KH domain TMEM208_SND2 PF05620.11 NODE_86824_length_184_cov_116.765101_g78883_i0reverse_frame_3 - 0.087 12.6 2.0 0.095 12.5 2.0 1.0 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 DUF2873 PF11395.8 NODE_86824_length_184_cov_116.765101_g78883_i0reverse_frame_3 - 4.1 7.3 15.5 88 3.1 15.5 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2873) DUF1952 PF09189.10 NODE_86820_length_184_cov_126.852349_g78879_i0reverse_frame_3 - 0.068 13.0 0.0 0.088 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1952) tRNA_int_end_N2 PF12928.7 NODE_86820_length_184_cov_126.852349_g78879_i0reverse_frame_3 - 0.21 11.8 0.3 0.21 11.8 0.3 1.5 2 0 0 2 2 2 0 tRNA-splicing endonuclease subunit sen54 N-term Asp PF00026.23 NODE_86818_length_184_cov_133.979866_g78877_i0reverse_frame_3 - 4.2e-09 36.3 0.3 4.7e-09 36.1 0.3 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease zf-C2H2 PF00096.26 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 8.5e-07 29.1 1.4 8.5e-07 29.1 1.4 2.1 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.00012 22.3 1.8 0.011 16.1 0.7 2.1 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.00061 20.4 2.9 0.00068 20.3 0.6 2.0 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.00091 19.5 1.4 0.00091 19.5 1.4 2.0 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.0021 18.4 2.7 0.003 17.9 0.6 2.1 2 0 0 2 2 2 1 Zinc-finger of C2H2 type DUF629 PF04780.12 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.013 14.0 1.4 0.013 14.0 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) Actin_micro PF17003.5 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.015 14.5 1.3 0.016 14.4 1.3 1.0 1 0 0 1 1 1 0 Putative actin-like family zf-LYAR PF08790.11 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.034 14.1 0.2 0.06 13.3 0.2 1.5 1 0 0 1 1 1 0 LYAR-type C2HC zinc finger FOXP-CC PF16159.5 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.036 14.7 0.2 0.055 14.1 0.1 1.4 1 1 0 1 1 1 0 FOXP coiled-coil domain zf-C2H2_2 PF12756.7 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.039 14.3 2.5 0.062 13.6 2.5 1.4 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Zn-ribbon_8 PF09723.10 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.063 13.4 0.2 0.082 13.0 0.2 1.3 1 0 0 1 1 1 0 Zinc ribbon domain zf-C2H2_8 PF15909.5 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.13 12.6 2.3 0.14 12.5 2.3 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon ABC_export PF16962.5 NODE_86811_length_184_cov_462.691275_g78870_i0reverse_frame_3 - 0.8 8.1 6.6 0.84 8.0 6.6 1.0 1 0 0 1 1 1 0 Putative ABC exporter AAA_34 PF13872.6 NODE_86805_length_185_cov_0.800000_g78864_i0forward_frame_3 - 1.6e-11 43.7 0.0 1.8e-11 43.5 0.0 1.1 1 0 0 1 1 1 1 P-loop containing NTP hydrolase pore-1 AAA PF00004.29 NODE_86803_length_185_cov_0.800000_g78862_i0reverse_frame_3 - 3.9e-14 53.2 0.0 4.1e-14 53.2 0.0 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Endonuc-dimeris PF09124.10 NODE_86801_length_185_cov_0.833333_g78860_i0reverse_frame_3 - 0.065 13.4 0.1 0.09 12.9 0.1 1.2 1 0 0 1 1 1 0 T4 recombination endonuclease VII, dimerisation MORN PF02493.20 NODE_86800_length_185_cov_0.833333_g78859_i0reverse_frame_3 - 0.076 12.9 1.4 0.15 12.0 0.3 2.2 3 1 0 3 3 3 0 MORN repeat Zn_Tnp_IS1 PF03811.13 NODE_86796_length_185_cov_0.873333_g78855_i0forward_frame_3 - 0.044 13.5 0.6 0.044 13.5 0.6 2.1 2 0 0 2 2 2 0 InsA N-terminal domain GST_C PF00043.25 NODE_86795_length_185_cov_0.893333_g78854_i0reverse_frame_3 - 0.18 12.0 0.0 0.24 11.7 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain CENP-B_dimeris PF09026.10 NODE_86793_length_185_cov_0.906667_g78852_i0reverse_frame_2 - 0.7 10.3 7.7 0.83 10.1 7.7 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain SR-25 PF10500.9 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_3 - 0.071 12.7 11.9 0.083 12.5 11.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Peptidase_M17_N PF02789.17 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_2 - 0.14 12.0 2.2 0.15 11.9 2.2 1.1 1 0 0 1 1 1 0 Cytosol aminopeptidase family, N-terminal domain DUF3377 PF11857.8 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_2 - 1.8 8.5 9.1 2.1 8.3 9.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) VirB8 PF04335.13 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_2 - 2 8.2 5.6 2.1 8.1 5.6 1.0 1 0 0 1 1 1 0 VirB8 protein RecA PF00154.21 NODE_86790_length_185_cov_0.913333_g78849_i0reverse_frame_2 - 1.6e-22 80.3 0.1 1.7e-22 80.2 0.1 1.0 1 0 0 1 1 1 1 recA bacterial DNA recombination protein EF-hand_7 PF13499.6 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 2.7e-10 40.6 0.1 3e-10 40.4 0.1 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 3.8e-10 38.6 0.8 5.7e-06 25.5 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 1e-08 34.3 0.6 2.5e-05 23.6 0.0 2.1 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 5.9e-07 29.2 0.2 4e-06 26.6 0.1 1.9 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 1.1e-06 28.1 0.9 0.0019 18.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain Dockerin_1 PF00404.18 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 0.034 14.3 0.1 0.043 14.0 0.1 1.2 1 0 0 1 1 1 0 Dockerin type I domain SPARC_Ca_bdg PF10591.9 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 0.19 12.1 0.0 0.21 11.9 0.0 1.0 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region DUF3937 PF13073.6 NODE_86789_length_185_cov_0.920000_g78848_i0forward_frame_2 - 0.046 13.8 0.4 0.054 13.6 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3937) TraF PF13728.6 NODE_86785_length_185_cov_0.933333_g78844_i0reverse_frame_3 - 1.7 8.4 7.0 1.7 8.4 7.0 1.0 1 0 0 1 1 1 0 F plasmid transfer operon protein Lamprin PF06403.11 NODE_86785_length_185_cov_0.933333_g78844_i0forward_frame_3 - 6.4 6.7 8.8 36 4.3 8.8 1.8 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_86785_length_185_cov_0.933333_g78844_i0forward_frame_2 - 0.85 9.6 5.1 1 9.3 5.1 1.2 1 0 0 1 1 1 0 Lamprin TPR_2 PF07719.17 NODE_86784_length_185_cov_0.946667_g78843_i0forward_frame_3 - 3.3e-05 23.7 0.0 0.00042 20.2 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_86784_length_185_cov_0.946667_g78843_i0forward_frame_3 - 0.02 14.7 0.1 0.68 9.8 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Helitron_like_N PF14214.6 NODE_86783_length_185_cov_0.953333_g78842_i0reverse_frame_3 - 2.2e-07 31.3 0.1 2.5e-07 31.1 0.1 1.1 1 0 0 1 1 1 1 Helitron helicase-like domain at N-terminus Gag_p10 PF02337.17 NODE_86782_length_185_cov_0.966667_g78841_i0reverse_frame_2 - 0.062 13.3 0.1 0.072 13.0 0.1 1.2 1 0 0 1 1 1 0 Retroviral GAG p10 protein VIT1 PF01988.19 NODE_86782_length_185_cov_0.966667_g78841_i0reverse_frame_2 - 0.062 13.2 0.1 0.062 13.2 0.1 1.1 1 0 0 1 1 1 0 VIT family Lamprin PF06403.11 NODE_86781_length_185_cov_0.973333_g78840_i0forward_frame_3 - 0.071 13.1 2.4 0.081 12.9 2.4 1.1 1 0 0 1 1 1 0 Lamprin HTH_18 PF12833.7 NODE_86779_length_185_cov_0.980000_g78838_i0reverse_frame_2 - 0.083 13.2 2.6 0.1 12.9 2.6 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain ALMS_repeat PF18727.1 NODE_86769_length_185_cov_1.040000_g78828_i0reverse_frame_3 - 0.21 11.5 0.4 0.29 11.1 0.4 1.2 1 0 0 1 1 1 0 Alstrom syndrome repeat Trehalose_PPase PF02358.16 NODE_86761_length_185_cov_1.053333_g78820_i0reverse_frame_2 - 0.0037 16.4 0.0 0.0039 16.4 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase DUF1378 PF07125.11 NODE_86758_length_185_cov_1.053333_g78817_i0reverse_frame_3 - 0.35 11.1 1.9 0.44 10.7 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) RseC_MucC PF04246.12 NODE_86758_length_185_cov_1.053333_g78817_i0reverse_frame_2 - 0.13 12.2 1.7 0.14 12.1 1.7 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF3377 PF11857.8 NODE_86757_length_185_cov_1.053333_g78816_i0reverse_frame_2 - 0.084 12.8 0.2 0.094 12.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) Ribosomal_S16 PF00886.19 NODE_86753_length_185_cov_1.060000_g78812_i0forward_frame_2 - 0.00013 21.9 0.0 0.00015 21.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S16 Corona_M PF01635.18 NODE_86751_length_185_cov_1.060000_g78810_i0forward_frame_2 - 0.09 12.1 0.2 0.095 12.0 0.2 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein Mito_carr PF00153.27 NODE_86746_length_185_cov_1.060000_g78805_i0reverse_frame_2 - 0.095 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial carrier protein Phage_Coat_B PF05356.11 NODE_86745_length_185_cov_1.060000_g78804_i0reverse_frame_2 - 0.23 11.4 0.5 0.27 11.2 0.5 1.1 1 0 0 1 1 1 0 Phage Coat protein B Antifungal_pept PF11410.8 NODE_86732_length_185_cov_1.066667_g78791_i0reverse_frame_2 - 0.018 14.9 0.2 0.033 14.1 0.2 1.3 1 0 0 1 1 1 0 Antifungal peptide PsbL PF02419.17 NODE_86731_length_185_cov_1.066667_g78790_i0reverse_frame_3 - 0.052 13.5 0.1 0.066 13.2 0.1 1.2 1 0 0 1 1 1 0 PsbL protein Methyltransf_29 PF03141.16 NODE_86729_length_185_cov_1.066667_g78788_i0reverse_frame_2 - 0.21 10.1 0.1 0.23 9.9 0.1 1.0 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Defensin_beta PF00711.19 NODE_86727_length_185_cov_1.066667_g78786_i0forward_frame_3 - 0.029 14.4 1.3 0.051 13.6 1.3 1.4 1 0 0 1 1 1 0 Beta defensin COX6B PF02297.17 NODE_86725_length_185_cov_1.066667_g78784_i0forward_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIb Hpre_diP_synt_I PF07456.11 NODE_86722_length_185_cov_1.066667_g78781_i0reverse_frame_2 - 0.11 12.5 0.2 0.13 12.3 0.2 1.1 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase component I DUF2274 PF10038.9 NODE_86720_length_185_cov_1.066667_g78779_i0reverse_frame_2 - 0.16 12.4 0.0 0.2 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2274) Mhr1 PF12829.7 NODE_86718_length_185_cov_1.066667_g78777_i0reverse_frame_3 - 0.064 13.4 0.1 0.078 13.1 0.1 1.1 1 0 0 1 1 1 0 Transcriptional regulation of mitochondrial recombination HTH_51 PF18558.1 NODE_86713_length_185_cov_1.066667_g78772_i0forward_frame_3 - 0.091 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain TAFA PF12020.8 NODE_86710_length_185_cov_1.066667_g78769_i0reverse_frame_3 - 0.1 13.1 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 TAFA family Hap4_Hap_bind PF10297.9 NODE_86700_length_185_cov_1.066667_g78759_i0reverse_frame_2 - 0.025 14.7 0.5 0.05 13.7 0.5 1.5 1 0 0 1 1 1 0 Minimal binding motif of Hap4 for binding to Hap2/3/5 DUF1560 PF07597.11 NODE_86693_length_185_cov_1.066667_g78752_i0reverse_frame_2 - 0.04 13.9 0.3 0.058 13.4 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1560) NICE-1 PF15845.5 NODE_86691_length_185_cov_1.066667_g78750_i0forward_frame_2 - 0.016 15.9 5.2 0.016 15.9 5.2 1.6 1 1 0 2 2 2 0 Cysteine-rich C-terminal 1 family PDE6_gamma PF04868.12 NODE_86683_length_185_cov_1.066667_g78742_i0forward_frame_3 - 0.12 12.7 0.2 0.15 12.3 0.2 1.2 1 0 0 1 1 1 0 Retinal cGMP phosphodiesterase, gamma subunit Cir_Bir_Yir PF06022.11 NODE_86679_length_185_cov_1.066667_g78738_i0reverse_frame_3 - 0.0053 16.3 1.8 0.0062 16.1 1.8 1.3 1 1 0 1 1 1 1 Plasmodium variant antigen protein Cir/Yir/Bir Phe_hydrox_dim PF07976.12 NODE_86677_length_185_cov_1.066667_g78736_i0forward_frame_3 - 0.062 13.3 0.0 0.062 13.3 0.0 1.1 1 0 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain Ribosomal_L4 PF00573.22 NODE_86674_length_185_cov_1.066667_g78733_i0forward_frame_2 - 0.0056 16.4 1.7 0.0063 16.2 1.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family DUF2644 PF10841.8 NODE_86672_length_185_cov_1.066667_g78731_i0forward_frame_3 - 0.13 12.6 0.4 0.15 12.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) Ribosomal_L18 PF17135.4 NODE_86671_length_185_cov_1.066667_g78730_i0forward_frame_3 - 0.079 12.4 0.0 0.079 12.3 0.0 1.0 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e zf-P11 PF03854.14 NODE_86669_length_185_cov_1.086667_g78728_i0reverse_frame_2 - 0.063 12.9 7.2 1.2 8.8 1.4 2.2 1 1 1 2 2 2 0 P-11 zinc finger Ribosomal_L40e PF01020.17 NODE_86669_length_185_cov_1.086667_g78728_i0reverse_frame_2 - 0.088 12.7 4.5 0.15 12.0 4.5 1.4 1 1 0 1 1 1 0 Ribosomal L40e family DUF1824 PF08854.10 NODE_86666_length_185_cov_1.113333_g78725_i0forward_frame_2 - 0.11 12.5 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1824) Iron_traffic PF04362.14 NODE_86661_length_185_cov_1.133333_g78720_i0reverse_frame_2 - 0.26 11.0 1.2 1.4 8.7 0.3 1.8 1 1 1 2 2 2 0 Bacterial Fe(2+) trafficking Gpi16 PF04113.14 NODE_86659_length_185_cov_1.140000_g78718_i0reverse_frame_3 - 0.075 11.5 0.0 0.078 11.4 0.0 1.0 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component ABC_membrane_2 PF06472.15 NODE_86658_length_185_cov_1.146667_g78717_i0forward_frame_2 - 0.035 13.5 1.1 0.037 13.4 1.1 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region 2 SLATT_2 PF18183.1 NODE_86643_length_185_cov_1.180000_g78702_i0reverse_frame_2 - 0.14 12.0 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 2 AAA_6 PF12774.7 NODE_86641_length_185_cov_1.180000_g78700_i0forward_frame_2 - 1.1e-31 110.0 0.4 1.2e-31 109.9 0.4 1.0 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region ATXN-1_C PF12547.8 NODE_86637_length_185_cov_1.200000_g78696_i0reverse_frame_3 - 4.7 7.6 10.7 7.9 6.9 4.3 2.5 1 1 1 2 2 2 0 Capicua transcriptional repressor modulator Gryzun-like PF12742.7 NODE_86636_length_185_cov_1.200000_g78695_i0reverse_frame_2 - 0.066 13.2 0.0 1.7 8.7 0.0 2.5 2 1 2 4 4 4 0 Gryzun, putative Golgi trafficking PQ-loop PF04193.14 NODE_86636_length_185_cov_1.200000_g78695_i0reverse_frame_2 - 5.7 6.8 10.0 12 5.8 0.5 3.0 1 1 2 3 3 3 0 PQ loop repeat 7tm_6 PF02949.20 NODE_86635_length_185_cov_1.206667_g78694_i0forward_frame_3 - 0.087 11.9 0.3 0.081 12.0 0.3 1.1 1 0 0 1 1 1 0 7tm Odorant receptor DUF1181 PF06680.11 NODE_86635_length_185_cov_1.206667_g78694_i0forward_frame_2 - 0.13 12.1 0.8 0.18 11.6 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1181) Vpu PF00558.19 NODE_86635_length_185_cov_1.206667_g78694_i0forward_frame_2 - 0.24 11.2 0.0 0.27 11.0 0.0 1.1 1 0 0 1 1 1 0 Vpu protein PPR PF01535.20 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 3.6e-16 58.2 0.1 1.5e-07 31.2 0.1 2.1 2 0 0 2 2 2 2 PPR repeat PPR_1 PF12854.7 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 2.4e-15 55.9 0.3 2.1e-09 36.9 0.2 2.1 2 0 0 2 2 2 2 PPR repeat PPR_2 PF13041.6 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 2.2e-12 47.0 0.0 1.8e-05 24.8 0.0 2.0 2 0 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 5.5e-06 26.4 0.0 0.03 14.4 0.0 2.0 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR_long PF17177.4 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 0.0056 16.1 0.0 0.0058 16.0 0.0 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP SYCP2_SLD PF18584.1 NODE_86622_length_185_cov_1.240000_g78681_i0reverse_frame_2 - 0.03 14.5 0.3 0.032 14.5 0.3 1.1 1 0 0 1 1 1 0 Synaptonemal complex 2 Spt16M-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks413.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks413.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks413.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks413.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pox_A32 PF04665.12 NODE_86618_length_185_cov_1.246667_g78677_i0forward_frame_2 - 0.067 12.6 0.0 0.067 12.6 0.0 1.1 1 0 0 1 1 1 0 Poxvirus A32 protein TAF PF02969.17 NODE_86615_length_185_cov_1.253333_g78674_i0reverse_frame_3 - 0.065 13.4 0.0 0.078 13.2 0.0 1.1 1 0 0 1 1 1 0 TATA box binding protein associated factor (TAF) UPF0542 PF15086.6 NODE_86611_length_185_cov_1.266667_g78670_i0forward_frame_2 - 0.095 12.6 0.7 0.12 12.4 0.7 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 DUF4898 PF16239.5 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_3 - 0.015 15.2 0.4 0.018 14.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4898) Torus PF16131.5 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 4.8e-05 24.0 2.3 4.8e-05 24.0 2.3 1.2 1 0 0 1 1 1 1 Torus domain zf-CCCH PF00642.24 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 0.044 13.7 6.9 0.094 12.7 3.4 2.7 2 1 1 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 0.081 12.8 5.5 0.096 12.5 3.9 1.9 2 0 0 2 2 2 0 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 0.37 10.9 6.1 0.24 11.5 3.6 2.1 2 0 0 2 2 2 0 Zinc finger domain Stm1_N PF09598.10 NODE_86602_length_185_cov_1.306667_g78661_i0reverse_frame_3 - 3.9 8.4 17.3 1.3e+02 3.5 17.3 2.1 1 1 0 1 1 1 0 Stm1 7TM_GPCR_Srv PF10323.9 NODE_86600_length_185_cov_1.313333_g78659_i0reverse_frame_2 - 0.048 13.0 0.2 0.053 12.9 0.2 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srv ADAM_CR_2 PF17771.1 NODE_86595_length_185_cov_1.326667_g78654_i0forward_frame_3 - 0.021 15.3 1.7 0.022 15.2 1.7 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich domain RICH PF05062.12 NODE_86590_length_185_cov_1.326667_g78649_i0forward_frame_2 - 0.012 16.0 1.1 0.015 15.6 1.1 1.3 1 0 0 1 1 1 0 RICH domain GBP PF02263.19 NODE_86589_length_185_cov_1.333333_g78648_i0reverse_frame_2 - 1.4e-08 34.4 0.0 1.6e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain AAA_22 PF13401.6 NODE_86589_length_185_cov_1.333333_g78648_i0reverse_frame_2 - 0.049 13.9 0.0 0.052 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain MG3 PF17791.1 NODE_86589_length_185_cov_1.333333_g78648_i0reverse_frame_2 - 0.049 13.9 0.0 0.063 13.6 0.0 1.1 1 0 0 1 1 1 0 Macroglobulin domain MG3 Dynamin_N PF00350.23 NODE_86589_length_185_cov_1.333333_g78648_i0reverse_frame_2 - 0.15 12.1 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Dynamin family N-glycanase_C PF09113.10 NODE_86588_length_185_cov_1.333333_g78647_i0reverse_frame_2 - 0.082 12.7 0.0 0.082 12.7 0.0 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal F-box_5 PF18511.1 NODE_86586_length_185_cov_1.333333_g78645_i0forward_frame_2 - 0.022 14.3 0.1 0.031 13.8 0.1 1.2 1 0 0 1 1 1 0 F-box SbsC_C PF18058.1 NODE_86586_length_185_cov_1.333333_g78645_i0forward_frame_2 - 0.058 13.6 0.1 0.067 13.4 0.1 1.0 1 0 0 1 1 1 0 SbsC C-terminal domain F-box-like PF12937.7 NODE_86586_length_185_cov_1.333333_g78645_i0forward_frame_2 - 0.23 11.4 0.0 0.27 11.1 0.0 1.1 1 0 0 1 1 1 0 F-box-like BT1 PF03092.16 NODE_86581_length_185_cov_1.333333_g78640_i0forward_frame_2 - 0.036 12.3 0.0 0.036 12.3 0.0 1.0 1 0 0 1 1 1 0 BT1 family Phage_int_SAM_3 PF14659.6 NODE_86579_length_185_cov_1.333333_g78638_i0forward_frame_2 - 0.019 15.2 0.1 0.028 14.7 0.1 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain DUF21 PF01595.20 NODE_86569_length_185_cov_1.380000_g78628_i0reverse_frame_3 - 0.0022 17.7 5.1 0.0038 17.0 5.1 1.4 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain PsbN PF02468.15 NODE_86569_length_185_cov_1.380000_g78628_i0reverse_frame_3 - 0.94 9.4 5.1 1.5 8.8 0.3 2.2 1 1 1 2 2 2 0 Photosystem II reaction centre N protein (psbN) DUF3270 PF11674.8 NODE_86568_length_185_cov_1.386667_g78627_i0forward_frame_2 - 0.049 13.8 0.8 0.054 13.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) Herpes_V23 PF01802.17 NODE_86567_length_185_cov_1.386667_g78626_i0reverse_frame_2 - 0.073 12.5 0.1 0.078 12.4 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus VP23 like capsid protein WHAMM-JMY_N PF15920.5 NODE_86562_length_185_cov_1.446667_g78621_i0reverse_frame_2 - 0.079 12.8 5.9 2.4 8.1 0.3 2.8 2 1 1 3 3 3 0 N-terminal of Junction-mediating and WASP homolog-associated FAM176 PF14851.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_3 - 2.5 7.8 7.6 2.6 7.7 7.6 1.1 1 0 0 1 1 1 0 FAM176 family N-SET PF11764.8 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 0.048 13.8 3.4 0.05 13.7 3.4 1.1 1 0 0 1 1 1 0 COMPASS (Complex proteins associated with Set1p) component N Secretin_N_2 PF07655.13 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 0.1 13.1 14.8 0.12 13.0 14.8 1.1 1 0 0 1 1 1 0 Secretin N-terminal domain Lin-8 PF03353.15 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 1.2 8.7 5.8 1.2 8.6 5.8 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Treslin_N PF15292.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 1.9 6.7 11.4 2.3 6.5 11.4 1.0 1 0 0 1 1 1 0 Treslin N-terminus CCDC106 PF15794.5 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 2.9 7.5 9.1 3.1 7.5 9.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 PARM PF17061.5 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 6 6.9 23.9 6.4 6.8 23.9 1.0 1 0 0 1 1 1 0 PARM DUF4614 PF15391.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 6.3 6.8 17.1 6.1 6.8 17.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) NAM-associated PF14303.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 8.8 7.0 12.7 9.7 6.9 12.7 1.0 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain TMEM154 PF15102.6 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.0057 16.6 1.2 0.0067 16.3 1.2 1.2 1 0 0 1 1 1 1 TMEM154 protein family EphA2_TM PF14575.6 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.03 15.2 0.0 0.032 15.1 0.0 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain TRAP_alpha PF03896.16 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.049 12.8 3.9 0.051 12.8 3.9 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Conotoxin PF02950.17 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.058 14.4 4.6 0.13 13.3 4.6 1.8 1 1 0 1 1 1 0 Conotoxin CobT PF06213.12 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.082 12.3 5.1 0.082 12.3 5.1 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT RRN3 PF05327.11 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 4.2 5.8 10.8 3.9 5.9 10.8 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Biotin_lipoyl PF00364.22 NODE_86557_length_185_cov_1.473333_g78616_i0reverse_frame_2 - 4.8e-18 64.8 1.8 5.1e-18 64.7 1.8 1.0 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 NODE_86557_length_185_cov_1.473333_g78616_i0reverse_frame_2 - 1.9e-05 24.4 1.4 0.0082 16.0 0.3 2.1 1 1 1 2 2 2 2 Biotin-lipoyl like GCV_H PF01597.19 NODE_86557_length_185_cov_1.473333_g78616_i0reverse_frame_2 - 4.4e-05 23.4 0.4 4.7e-05 23.3 0.4 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein RnfC_N PF13375.6 NODE_86557_length_185_cov_1.473333_g78616_i0reverse_frame_2 - 0.14 12.1 1.3 0.45 10.5 0.5 1.8 1 1 1 2 2 2 0 RnfC Barrel sandwich hybrid domain Vif PF00559.17 NODE_86554_length_185_cov_1.493333_g78613_i0reverse_frame_2 - 0.099 12.3 0.0 0.099 12.3 0.0 1.2 1 0 0 1 1 1 0 Retroviral Vif (Viral infectivity) protein TNF PF00229.18 NODE_86553_length_185_cov_1.493333_g78612_i0reverse_frame_3 - 0.086 12.8 0.0 0.086 12.8 0.0 1.1 1 0 0 1 1 1 0 TNF(Tumour Necrosis Factor) family Ion_trans PF00520.31 NODE_86551_length_185_cov_1.500000_g78610_i0reverse_frame_3 - 1.5 8.0 6.7 3.4 6.8 0.7 2.0 1 1 1 2 2 2 0 Ion transport protein IDH PF03971.14 NODE_86548_length_185_cov_1.506667_g78607_i0forward_frame_2 - 8.6e-19 67.5 0.1 9e-19 67.4 0.1 1.0 1 0 0 1 1 1 1 Monomeric isocitrate dehydrogenase RseC_MucC PF04246.12 NODE_86547_length_185_cov_1.513333_g78606_i0reverse_frame_2 - 0.084 12.8 0.3 0.094 12.7 0.3 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC GerE PF00196.19 NODE_86546_length_185_cov_1.513333_g78605_i0reverse_frame_3 - 0.042 13.4 0.0 0.059 12.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family RsgA_N PF16745.5 NODE_86542_length_185_cov_1.533333_g78601_i0reverse_frame_3 - 0.081 12.7 0.2 0.21 11.3 0.1 1.7 2 0 0 2 2 2 0 RsgA N-terminal domain CST-I PF06002.12 NODE_86537_length_185_cov_1.553333_g78596_i0reverse_frame_3 - 0.027 14.2 0.1 0.03 14.1 0.1 1.0 1 0 0 1 1 1 0 Alpha-2,3-sialyltransferase (CST-I) Aa_trans PF01490.18 NODE_86523_length_185_cov_1.586667_g78582_i0forward_frame_2 - 0.00012 21.0 3.9 0.00012 21.0 3.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF962 PF06127.11 NODE_86516_length_185_cov_1.593333_g78575_i0forward_frame_2 - 0.3 11.2 2.9 0.36 10.9 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DUF4817 PF16087.5 NODE_86513_length_185_cov_1.600000_g78572_i0reverse_frame_2 - 0.041 13.7 0.1 0.052 13.4 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) zf-U1 PF06220.12 NODE_86501_length_185_cov_1.600000_g78560_i0reverse_frame_3 - 0.17 11.7 0.1 0.36 10.6 0.1 1.5 1 0 0 1 1 1 0 U1 zinc finger RepA1_leader PF08048.12 NODE_86499_length_185_cov_1.600000_g78558_i0reverse_frame_3 - 0.015 15.6 1.5 0.023 14.9 1.5 1.3 1 0 0 1 1 1 0 Tap RepA1 leader peptide Pkinase PF00069.25 NODE_86496_length_185_cov_1.600000_g78555_i0forward_frame_2 - 5e-15 55.6 0.0 5e-15 55.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_86496_length_185_cov_1.600000_g78555_i0forward_frame_2 - 1.7e-06 27.5 0.0 2e-06 27.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4108 PF13390.6 NODE_86495_length_185_cov_1.600000_g78554_i0reverse_frame_2 - 0.041 13.8 0.5 0.044 13.7 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4108) Peptidase_M32 PF02074.15 NODE_86494_length_185_cov_1.606667_g78553_i0forward_frame_2 - 0.15 10.8 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase ATP-synt_8 PF00895.20 NODE_86491_length_185_cov_1.620000_g78550_i0reverse_frame_2 - 0.08 13.4 0.8 0.1 13.0 0.8 1.2 1 0 0 1 1 1 0 ATP synthase protein 8 GUCT PF08152.12 NODE_86491_length_185_cov_1.620000_g78550_i0forward_frame_3 - 0.014 15.7 0.1 0.016 15.5 0.1 1.1 1 0 0 1 1 1 0 GUCT (NUC152) domain DNA_pol_B_exo1 PF03104.19 NODE_86487_length_185_cov_1.653333_g78546_i0reverse_frame_3 - 1e-13 51.2 0.3 1.1e-13 51.1 0.3 1.0 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DUF3078 PF11276.8 NODE_86480_length_185_cov_1.693333_g78539_i0reverse_frame_3 - 0.079 13.4 0.1 0.098 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3078) YABBY PF04690.13 NODE_86472_length_185_cov_1.760000_g78531_i0reverse_frame_3 - 0.27 11.8 0.5 0.3 11.6 0.5 1.1 1 0 0 1 1 1 0 YABBY protein HBS1_N PF08938.10 NODE_86471_length_185_cov_1.760000_g78530_i0forward_frame_3 - 0.19 12.1 0.1 0.22 11.8 0.1 1.1 1 0 0 1 1 1 0 HBS1 N-terminus UPF0242 PF06785.11 NODE_86469_length_185_cov_1.760000_g78528_i0forward_frame_2 - 0.98 9.5 3.9 1 9.4 3.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus PhoR PF11808.8 NODE_86469_length_185_cov_1.760000_g78528_i0forward_frame_2 - 1.4 9.4 6.8 1.5 9.3 6.8 1.1 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR BCMA-Tall_bind PF09257.10 NODE_86462_length_185_cov_1.806667_g78521_i0reverse_frame_3 - 0.16 12.1 1.2 0.26 11.4 1.2 1.3 1 0 0 1 1 1 0 BCMA, TALL-1 binding Cnn_1N PF07989.11 NODE_86460_length_185_cov_1.826667_g78519_i0reverse_frame_3 - 0.022 14.9 0.2 0.025 14.7 0.2 1.1 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF948 PF06103.11 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.0058 16.9 1.6 0.0071 16.6 1.6 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) NPV_P10 PF05531.12 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.023 15.2 1.5 0.025 15.0 1.5 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein TolA_bind_tri PF16331.5 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.035 14.2 0.3 0.042 13.9 0.3 1.1 1 0 0 1 1 1 0 TolA binding protein trimerisation Anti-adapt_IraP PF10796.9 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.051 14.1 0.4 0.073 13.6 0.3 1.3 1 1 0 1 1 1 0 Sigma-S stabilisation anti-adaptor protein Bap31_Bap29_C PF18035.1 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.077 13.0 0.2 0.099 12.7 0.2 1.2 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain DOG1 PF14144.6 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.09 13.0 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Seed dormancy control RNaseH_like PF04308.12 NODE_86453_length_185_cov_1.866667_g78512_i0reverse_frame_3 - 0.076 12.9 0.0 0.077 12.9 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease H-like CYYR1 PF10873.8 NODE_86450_length_185_cov_1.893333_g78509_i0reverse_frame_3 - 0.24 11.9 0.8 0.24 11.8 0.8 1.1 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 ATE_C PF04377.15 NODE_86447_length_185_cov_1.913333_g78506_i0forward_frame_3 - 2.6e-15 57.2 2.9 2.8e-15 57.1 2.9 1.0 1 0 0 1 1 1 1 Arginine-tRNA-protein transferase, C terminus GPAT_N PF14829.6 NODE_86441_length_185_cov_1.966667_g78500_i0reverse_frame_2 - 0.041 13.9 0.0 0.05 13.6 0.0 1.1 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase N-terminal VitD-bind_III PF09164.10 NODE_86440_length_185_cov_1.973333_g78499_i0forward_frame_2 - 0.016 15.2 0.1 0.027 14.5 0.1 1.4 1 1 0 1 1 1 0 Vitamin D binding protein, domain III Ribosomal_S8 PF00410.19 NODE_86431_length_185_cov_2.066667_g78490_i0reverse_frame_3 - 0.0072 16.3 0.1 0.011 15.7 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 NODE_86431_length_185_cov_2.066667_g78490_i0reverse_frame_2 - 2.2e-12 46.6 0.2 3e-12 46.1 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e HTH_17 PF12728.7 NODE_86431_length_185_cov_2.066667_g78490_i0reverse_frame_2 - 0.071 13.3 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain UPF0560 PF10577.9 NODE_86427_length_185_cov_2.113333_g78486_i0reverse_frame_2 - 3.6 6.0 4.7 3.4 6.0 4.7 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 PMP22_Claudin PF00822.20 NODE_86426_length_185_cov_2.113333_g78485_i0reverse_frame_3 - 0.023 14.6 0.3 0.024 14.5 0.3 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family Tektin PF03148.14 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.00056 18.8 3.2 0.00056 18.8 3.2 1.0 1 0 0 1 1 1 1 Tektin family Troponin PF00992.20 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.0018 18.6 4.6 0.0019 18.5 4.6 1.0 1 0 0 1 1 1 1 Troponin DivIC PF04977.15 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.014 15.2 5.9 0.39 10.5 2.1 2.0 1 1 1 2 2 2 0 Septum formation initiator Prefoldin_2 PF01920.20 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.015 15.3 4.1 0.023 14.6 4.1 1.4 1 1 0 1 1 1 0 Prefoldin subunit DUF1319 PF07028.11 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.017 15.4 4.3 0.048 13.9 4.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1319) PI3K_P85_iSH2 PF16454.5 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.017 14.7 4.8 0.019 14.6 4.8 1.0 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Pox_A_type_inc PF04508.12 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.019 14.8 3.2 0.2 11.5 0.8 3.1 3 1 0 3 3 3 0 Viral A-type inclusion protein repeat APG6_N PF17675.1 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.03 14.9 3.6 0.034 14.7 3.6 1.0 1 0 0 1 1 1 0 Apg6 coiled-coil region Bacillus_HBL PF05791.11 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.035 13.9 2.8 0.038 13.8 2.8 1.0 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) NleF_casp_inhib PF16809.5 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.072 13.0 4.3 0.075 12.9 4.3 1.0 1 0 0 1 1 1 0 NleF caspase inhibitor Ribosomal_L33 PF00471.20 NODE_86425_length_185_cov_2.113333_g78484_i0forward_frame_2 - 0.062 13.8 0.1 0.084 13.3 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L33 zf-CCCH_4 PF18044.1 NODE_86424_length_185_cov_2.120000_g78483_i0reverse_frame_2 - 0.049 13.4 0.6 0.59 10.0 0.0 2.4 3 0 0 3 3 3 0 CCCH-type zinc finger SNF2_N PF00176.23 NODE_86416_length_185_cov_2.133333_g78475_i0forward_frame_3 - 5.4e-08 31.9 0.2 5.6e-08 31.9 0.2 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain Ribosomal_L21e PF01157.18 NODE_86412_length_185_cov_2.140000_g78471_i0forward_frame_3 - 0.099 12.5 0.0 0.099 12.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L21e Pal1 PF08316.11 NODE_86409_length_185_cov_2.153333_g78468_i0forward_frame_3 - 0.21 12.3 0.9 0.28 11.9 0.9 1.2 1 0 0 1 1 1 0 Pal1 cell morphology protein NUC173 PF08161.12 NODE_86407_length_185_cov_2.160000_g78466_i0reverse_frame_2 - 0.0095 15.6 0.2 0.0095 15.6 0.2 1.0 1 0 0 1 1 1 1 NUC173 domain FerA PF08165.11 NODE_86407_length_185_cov_2.160000_g78466_i0forward_frame_2 - 0.14 12.1 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 FerA (NUC095) domain UCR_UQCRX_QCR9 PF05365.12 NODE_86407_length_185_cov_2.160000_g78466_i0forward_frame_2 - 0.25 11.3 0.0 0.33 10.9 0.0 1.1 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like DUF4778 PF16008.5 NODE_86402_length_185_cov_2.200000_g78461_i0reverse_frame_3 - 0.2 11.7 0.4 0.22 11.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) Dickkopf_N PF04706.12 NODE_86393_length_185_cov_2.280000_g78452_i0reverse_frame_3 - 2.6 8.6 16.1 5.6 7.5 15.9 1.7 1 1 1 2 2 2 0 Dickkopf N-terminal cysteine-rich region DUF4726 PF15855.5 NODE_86392_length_185_cov_2.293333_g78451_i0reverse_frame_3 - 0.13 12.5 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) CAP_N PF01213.19 NODE_86392_length_185_cov_2.293333_g78451_i0reverse_frame_2 - 1 8.8 2.8 0.94 8.9 2.8 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal FAM193_C PF15914.5 NODE_86388_length_185_cov_2.313333_g78447_i0reverse_frame_3 - 0.19 11.5 0.3 0.34 10.7 0.0 1.6 2 0 0 2 2 2 0 FAM193 family C-terminal DUF334 PF03904.13 NODE_86388_length_185_cov_2.313333_g78447_i0reverse_frame_2 - 0.032 13.8 0.2 0.036 13.6 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) DUF4413 PF14372.6 NODE_86384_length_185_cov_2.380000_g78443_i0reverse_frame_3 - 0.11 12.9 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4413) DUF3602 PF12223.8 NODE_86383_length_185_cov_2.393333_g78442_i0forward_frame_3 - 0.056 14.0 0.5 0.067 13.8 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3602) UPF0176_N PF17773.1 NODE_86381_length_185_cov_2.393333_g78440_i0forward_frame_3 - 0.0012 19.1 0.1 0.0017 18.7 0.1 1.2 1 0 0 1 1 1 1 UPF0176 acylphosphatase like domain Sugar_tr PF00083.24 NODE_86378_length_185_cov_2.426667_g78437_i0reverse_frame_3 - 2.7e-09 36.4 7.1 2.9e-09 36.3 7.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_86378_length_185_cov_2.426667_g78437_i0reverse_frame_3 - 0.0027 16.7 7.7 0.0028 16.7 7.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Atrophin-1 PF03154.15 NODE_86377_length_185_cov_2.433333_g78436_i0forward_frame_2 - 0.29 9.4 4.7 0.28 9.4 4.7 1.0 1 0 0 1 1 1 0 Atrophin-1 family zf-met2 PF12907.7 NODE_86377_length_185_cov_2.433333_g78436_i0forward_frame_2 - 0.46 10.7 1.9 0.78 9.9 1.9 1.5 1 1 0 1 1 1 0 Zinc-binding DUF3915 PF13054.6 NODE_86377_length_185_cov_2.433333_g78436_i0forward_frame_2 - 0.52 10.3 6.7 0.59 10.1 6.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) tRNA_SAD PF07973.14 NODE_86376_length_185_cov_2.466667_g78435_i0reverse_frame_2 - 0.14 12.3 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Threonyl and Alanyl tRNA synthetase second additional domain AnfG_VnfG PF03139.15 NODE_86375_length_185_cov_2.480000_g78434_i0forward_frame_3 - 0.022 14.9 0.2 0.024 14.8 0.2 1.1 1 0 0 1 1 1 0 Vanadium/alternative nitrogenase delta subunit Vps53_N PF04100.12 NODE_86369_length_185_cov_2.586667_g78428_i0forward_frame_2 - 7.1e-11 41.7 0.0 7.8e-11 41.6 0.0 1.0 1 0 0 1 1 1 1 Vps53-like, N-terminal HofP PF10748.9 NODE_86369_length_185_cov_2.586667_g78428_i0forward_frame_2 - 0.068 12.7 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 DNA utilization proteins HofP HEAT_2 PF13646.6 NODE_86365_length_185_cov_2.646667_g78424_i0forward_frame_2 - 0.016 15.6 0.0 0.019 15.4 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats TMIE PF16038.5 NODE_86359_length_185_cov_2.840000_g78418_i0reverse_frame_2 - 0.19 11.6 2.7 0.29 11.0 2.7 1.3 1 0 0 1 1 1 0 TMIE protein DUF4713 PF15831.5 NODE_86359_length_185_cov_2.840000_g78418_i0reverse_frame_2 - 1.3 9.5 5.9 1.6 9.2 3.6 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4713) SRTM1 PF15872.5 NODE_86354_length_185_cov_3.046667_g78413_i0reverse_frame_2 - 0.15 12.3 0.6 0.16 12.2 0.6 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 DUF3399 PF11879.8 NODE_86353_length_185_cov_3.093333_g78412_i0reverse_frame_2 - 2.3 8.6 7.5 1.8 8.9 6.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) Asparaginase_II PF06089.12 NODE_86344_length_185_cov_3.646667_g78403_i0reverse_frame_2 - 0.059 12.4 0.0 0.064 12.3 0.0 1.0 1 0 0 1 1 1 0 L-asparaginase II 2OG-FeII_Oxy_3 PF13640.6 NODE_86344_length_185_cov_3.646667_g78403_i0forward_frame_2 - 0.065 14.1 0.0 0.078 13.9 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Phage_integrase PF00589.22 NODE_86339_length_185_cov_5.226667_g78398_i0reverse_frame_3 - 0.00011 22.0 0.1 0.00014 21.7 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family Arteri_Gl PF00951.18 NODE_86338_length_185_cov_5.353333_g78397_i0reverse_frame_3 - 9.6 6.0 15.2 9.9 5.9 15.2 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein Jak1_Phl PF17887.1 NODE_86338_length_185_cov_5.353333_g78397_i0forward_frame_2 - 4.6 7.2 12.2 5 7.1 12.2 1.0 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain Peptidase_C1 PF00112.23 NODE_86337_length_185_cov_6.133333_g78396_i0reverse_frame_3 - 2.9e-06 27.5 2.5 3.1e-06 27.4 2.5 1.0 1 0 0 1 1 1 1 Papain family cysteine protease DUF3377 PF11857.8 NODE_86336_length_185_cov_8.293333_g78395_i0forward_frame_3 - 0.63 10.0 2.8 0.85 9.6 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) DUF2798 PF11391.8 NODE_86336_length_185_cov_8.293333_g78395_i0forward_frame_2 - 0.029 14.4 4.0 0.037 14.1 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2798) MNSV_P7B PF06692.11 NODE_86336_length_185_cov_8.293333_g78395_i0forward_frame_2 - 5.3 7.1 7.5 1 9.4 0.6 2.2 1 1 1 2 2 2 0 Melon necrotic spot virus P7B protein zf-LITAF-like PF10601.9 NODE_86328_length_185_cov_22.020000_g78387_i0forward_frame_2 - 0.045 14.0 0.2 0.066 13.5 0.2 1.3 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain Resistin PF06954.11 NODE_86326_length_185_cov_23.580000_g78385_i0forward_frame_2 - 0.0072 16.8 2.1 0.008 16.7 2.1 1.1 1 0 0 1 1 1 1 Resistin DUF4304 PF14137.6 NODE_86324_length_185_cov_25.353333_g78383_i0forward_frame_3 - 0.061 13.5 0.9 0.07 13.3 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4304) Baculo_PP31 PF05311.11 NODE_86321_length_185_cov_26.320000_g78380_i0reverse_frame_2 - 0.00022 20.8 6.0 0.00025 20.6 6.0 1.0 1 0 0 1 1 1 1 Baculovirus 33KDa late protein (PP31) Phage_term_sma PF07141.11 NODE_86320_length_185_cov_26.966667_g78379_i0forward_frame_3 - 0.096 12.5 0.1 0.11 12.2 0.1 1.0 1 0 0 1 1 1 0 Putative bacteriophage terminase small subunit DUF35_N PF12172.8 NODE_86316_length_185_cov_32.066667_g78375_i0reverse_frame_3 - 0.14 12.1 2.1 0.26 11.2 2.1 1.5 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Ribosomal_L37ae PF01780.19 NODE_86316_length_185_cov_32.066667_g78375_i0forward_frame_2 - 0.042 13.9 0.2 0.047 13.8 0.2 1.1 1 0 0 1 1 1 0 Ribosomal L37ae protein family DUF5522 PF17653.1 NODE_86306_length_185_cov_38.533333_g78365_i0reverse_frame_2 - 6.1e-05 22.9 9.1 8.5e-05 22.4 9.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5522) NTP_transf_3 PF12804.7 NODE_86302_length_185_cov_40.233333_g78361_i0reverse_frame_2 - 0.076 13.4 0.1 0.084 13.2 0.1 1.0 1 0 0 1 1 1 0 MobA-like NTP transferase domain NSP2_assoc PF14758.6 NODE_86301_length_185_cov_40.466667_g78360_i0reverse_frame_2 - 0.045 14.1 0.1 0.047 14.0 0.1 1.0 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein LPAM_2 PF13627.6 NODE_86299_length_185_cov_41.106667_g78358_i0reverse_frame_3 - 0.088 12.7 0.5 0.14 12.0 0.5 1.3 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site Keratin_matx PF04579.12 NODE_86294_length_185_cov_44.700000_g78353_i0reverse_frame_2 - 0.045 14.1 0.0 0.054 13.8 0.0 1.1 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein Histone_H2A_C PF16211.5 NODE_86293_length_185_cov_45.400000_g78352_i0forward_frame_3 - 0.78 9.5 3.4 1.1 9.0 3.4 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Ketoacyl-synt_2 PF13723.6 NODE_86292_length_185_cov_47.493333_g78351_i0reverse_frame_2 - 0.031 13.9 0.0 0.031 13.9 0.0 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain CDC48_N PF02359.18 NODE_86284_length_185_cov_62.253333_g78343_i0reverse_frame_2 - 0.16 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Mvb12 PF09452.10 NODE_86281_length_185_cov_64.880000_g78340_i0reverse_frame_2 - 0.051 14.0 0.1 0.051 14.0 0.1 1.1 1 0 0 1 1 1 0 ESCRT-I subunit Mvb12 Phage_RpbA PF10789.9 NODE_86280_length_185_cov_65.200000_g78339_i0reverse_frame_3 - 0.11 12.6 0.9 0.11 12.5 0.9 1.0 1 0 0 1 1 1 0 Phage RNA polymerase binding, RpbA Filament PF00038.21 NODE_86279_length_185_cov_65.766667_g78338_i0forward_frame_3 - 0.0015 18.2 1.6 0.0017 18.0 1.6 1.2 1 0 0 1 1 1 1 Intermediate filament protein Tup_N PF08581.10 NODE_86279_length_185_cov_65.766667_g78338_i0forward_frame_3 - 0.09 13.1 4.3 0.063 13.6 2.0 1.8 1 1 1 2 2 2 0 Tup N-terminal DUF1936 PF09151.10 NODE_86275_length_185_cov_68.993333_g78334_i0forward_frame_3 - 0.12 12.3 0.2 0.17 11.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) SUR7 PF06687.12 NODE_86260_length_185_cov_101.713333_g78319_i0reverse_frame_3 - 7.8 6.1 12.5 8.1 6.0 12.5 1.0 1 0 0 1 1 1 0 SUR7/PalI family ETRAMP PF09716.10 NODE_86260_length_185_cov_101.713333_g78319_i0forward_frame_3 - 1.8 8.7 12.7 2.2 8.4 12.7 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) SR-25 PF10500.9 NODE_86260_length_185_cov_101.713333_g78319_i0forward_frame_2 - 0.13 11.9 11.2 0.14 11.7 11.2 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein 2C_adapt PF08793.10 NODE_86257_length_185_cov_125.000000_g78316_i0forward_frame_2 - 0.092 12.9 0.4 5.2 7.3 0.3 2.2 2 0 0 2 2 2 0 2-cysteine adaptor domain DUF995 PF06191.12 NODE_86256_length_185_cov_149.500000_g78315_i0reverse_frame_3 - 0.16 11.7 0.0 0.19 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF995) Cellulase-like PF12876.7 NODE_86255_length_185_cov_157.740000_g78314_i0reverse_frame_2 - 0.1 11.9 0.2 0.12 11.7 0.2 1.0 1 0 0 1 1 1 0 Sugar-binding cellulase-like DUF390 PF04094.14 NODE_86249_length_185_cov_259.946667_g78308_i0forward_frame_3 - 0.052 11.8 0.9 0.046 12.0 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF390) NACHT_sigma PF17106.5 NODE_86242_length_185_cov_8124.893333_g78301_i0forward_frame_3 - 0.0022 18.1 0.4 0.0034 17.5 0.4 1.3 1 0 0 1 1 1 1 Sigma domain on NACHT-NTPases KASH PF10541.9 NODE_86241_length_185_cov_15186.153333_g78300_i0reverse_frame_2 - 0.097 13.0 2.0 0.13 12.6 2.0 1.2 1 0 0 1 1 1 0 Nuclear envelope localisation domain DUF2949 PF11165.8 NODE_86238_length_185_cov_704310.873333_g78297_i0reverse_frame_3 - 0.1 13.0 0.4 0.23 11.8 0.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2949) T_cell_tran_alt PF15128.6 NODE_86238_length_185_cov_704310.873333_g78297_i0forward_frame_2 - 0.09 12.6 0.0 0.097 12.5 0.0 1.1 1 0 0 1 1 1 0 T-cell leukemia translocation-altered Peptidase_C8 PF03569.13 NODE_86235_length_186_cov_0.841060_g78294_i0reverse_frame_2 - 0.033 13.7 0.0 0.038 13.5 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C8 DUF2650 PF10853.8 NODE_86235_length_186_cov_0.841060_g78294_i0forward_frame_2 - 0.22 11.3 4.6 0.35 10.6 4.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) 3-dmu-9_3-mt PF06983.13 NODE_86225_length_186_cov_0.933775_g78284_i0forward_frame_3 - 0.14 12.7 0.0 0.17 12.5 0.0 1.0 1 0 0 1 1 1 0 3-demethylubiquinone-9 3-methyltransferase DUF865 PF05906.11 NODE_86223_length_186_cov_0.940397_g78282_i0reverse_frame_2 - 0.2 11.4 1.4 0.41 10.5 1.4 1.5 1 0 0 1 1 1 0 Herpesvirus-7 repeat of unknown function (DUF865) Lamprin PF06403.11 NODE_86221_length_186_cov_0.947020_g78280_i0reverse_frame_3 - 0.31 11.0 2.4 1.4 8.8 2.4 1.8 1 1 0 1 1 1 0 Lamprin BRK PF07533.16 NODE_86220_length_186_cov_0.960265_g78279_i0forward_frame_3 - 0.16 11.7 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 BRK domain FAP PF07174.11 NODE_86218_length_186_cov_0.973510_g78277_i0reverse_frame_3 - 8.9 5.7 18.6 10 5.4 18.6 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_86218_length_186_cov_0.973510_g78277_i0forward_frame_3 - 0.73 9.8 7.4 0.82 9.6 7.4 1.1 1 0 0 1 1 1 0 Lamprin Spindle_Spc25 PF08234.12 NODE_86217_length_186_cov_0.973510_g78276_i0reverse_frame_2 - 0.087 13.0 0.3 0.13 12.5 0.3 1.3 1 1 0 1 1 1 0 Chromosome segregation protein Spc25 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks414.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks414.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks414.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks414.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:28:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5540 PF17694.1 NODE_86213_length_186_cov_0.993377_g78272_i0forward_frame_3 - 0.044 14.3 0.6 11 6.6 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5540) DUF3944 PF13099.6 NODE_86211_length_186_cov_0.993377_g78270_i0reverse_frame_3 - 0.049 13.5 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3944) SWIRM-assoc_2 PF16496.5 NODE_86200_length_186_cov_1.033113_g78259_i0reverse_frame_2 - 0.16 10.8 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal Peptidase_C33 PF05412.12 NODE_86198_length_186_cov_1.039735_g78257_i0reverse_frame_2 - 0.12 12.4 0.0 0.15 12.1 0.0 1.0 1 0 0 1 1 1 0 Equine arterivirus Nsp2-type cysteine proteinase IrmA PF18673.1 NODE_86176_length_186_cov_1.052980_g78235_i0reverse_frame_3 - 0.0069 16.5 0.2 0.0074 16.4 0.2 1.0 1 0 0 1 1 1 1 interleukin receptor mimic protein A CadC_C1 PF18500.1 NODE_86176_length_186_cov_1.052980_g78235_i0reverse_frame_3 - 0.046 13.9 0.1 0.046 13.9 0.1 1.1 1 0 0 1 1 1 0 CadC C-terminal domain 1 Malt_amylase_C PF16657.5 NODE_86172_length_186_cov_1.052980_g78231_i0forward_frame_2 - 0.012 15.8 0.0 0.015 15.4 0.0 1.2 1 0 0 1 1 1 0 Maltogenic Amylase, C-terminal domain YedD PF13987.6 NODE_86169_length_186_cov_1.059603_g78228_i0forward_frame_2 - 0.15 11.9 0.0 0.16 11.8 0.0 1.0 1 0 0 1 1 1 0 YedD-like protein BTRD1 PF17660.1 NODE_86165_length_186_cov_1.059603_g78224_i0reverse_frame_2 - 0.082 12.7 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial tandem repeat domain 1 TIP_N PF12457.8 NODE_86158_length_186_cov_1.059603_g78217_i0reverse_frame_2 - 0.043 14.2 1.4 0.046 14.1 1.4 1.1 1 0 0 1 1 1 0 Tuftelin interacting protein N terminal Musclin PF11037.8 NODE_86155_length_186_cov_1.059603_g78214_i0forward_frame_3 - 0.092 12.7 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Insulin-resistance promoting peptide in skeletal muscle Cyd_oper_YbgE PF09600.10 NODE_86155_length_186_cov_1.059603_g78214_i0forward_frame_2 - 0.17 12.2 0.7 0.3 11.5 0.3 1.6 2 0 0 2 2 2 0 Cyd operon protein YbgE (Cyd_oper_YbgE) Connexin43 PF03508.13 NODE_86154_length_186_cov_1.059603_g78213_i0reverse_frame_3 - 0.036 13.6 3.2 0.063 12.8 3.2 1.4 1 0 0 1 1 1 0 Gap junction alpha-1 protein (Cx43) FAP PF07174.11 NODE_86152_length_186_cov_1.059603_g78211_i0forward_frame_3 - 1 8.7 10.2 1.1 8.6 10.2 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DUF5321 PF17254.2 NODE_86148_length_186_cov_1.059603_g78207_i0reverse_frame_3 - 0.068 12.6 0.0 0.068 12.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5321) Cir_Bir_Yir PF06022.11 NODE_86142_length_186_cov_1.059603_g78201_i0forward_frame_2 - 0.046 13.2 1.8 0.052 13.0 1.8 1.0 1 0 0 1 1 1 0 Plasmodium variant antigen protein Cir/Yir/Bir DUF4357 PF14267.6 NODE_86138_length_186_cov_1.059603_g78197_i0reverse_frame_2 - 0.18 11.8 0.3 0.26 11.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4357) Chlam_PMP PF02415.17 NODE_86136_length_186_cov_1.059603_g78195_i0forward_frame_3 - 0.00091 19.6 2.0 1 10.0 0.3 2.5 2 1 0 2 2 2 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat ACT PF01842.25 NODE_86132_length_186_cov_1.059603_g78191_i0forward_frame_2 - 0.024 14.4 0.0 0.041 13.7 0.0 1.3 1 0 0 1 1 1 0 ACT domain Phage_T4_gp36 PF03903.13 NODE_86126_length_186_cov_1.059603_g78185_i0reverse_frame_3 - 0.09 12.7 0.0 0.094 12.7 0.0 1.1 1 0 0 1 1 1 0 Phage T4 tail fibre Ank_4 PF13637.6 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 8.8e-10 38.9 0.1 2.3e-06 28.0 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 3.9e-09 36.6 0.2 3.5e-07 30.4 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 9e-09 35.8 0.0 1e-08 35.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 4.6e-07 30.0 0.1 7.9e-05 22.9 0.0 2.4 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 0.00023 21.3 0.0 0.014 15.8 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Cytochrom_B559 PF00283.19 NODE_86121_length_186_cov_1.059603_g78180_i0forward_frame_3 - 0.022 14.2 4.1 0.15 11.5 0.4 2.2 2 0 0 2 2 2 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits NADHdh PF00146.21 NODE_86118_length_186_cov_1.059603_g78177_i0reverse_frame_2 - 5.7e-17 62.0 3.4 6e-17 61.9 3.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUSP PF06337.12 NODE_86107_length_186_cov_1.059603_g78166_i0reverse_frame_3 - 0.013 16.1 0.3 0.013 16.1 0.3 1.1 1 0 0 1 1 1 0 DUSP domain VLPT PF07122.11 NODE_86102_length_186_cov_1.059603_g78161_i0forward_frame_2 - 0.1 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Variable length PCR target protein (VLPT) Spore_YabQ PF09578.10 NODE_86099_length_186_cov_1.066225_g78158_i0forward_frame_2 - 0.44 10.8 5.6 0.49 10.7 5.6 1.1 1 0 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) DUF5363 PF17320.2 NODE_86098_length_186_cov_1.066225_g78157_i0reverse_frame_3 - 0.065 13.1 0.1 0.1 12.5 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5363) Pyr_redox_2 PF07992.14 NODE_86093_length_186_cov_1.079470_g78152_i0reverse_frame_2 - 1e-10 41.3 0.0 1.1e-10 41.3 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_86093_length_186_cov_1.079470_g78152_i0reverse_frame_2 - 0.00019 21.9 0.2 0.00026 21.5 0.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 NODE_86093_length_186_cov_1.079470_g78152_i0reverse_frame_2 - 0.043 13.2 0.3 0.058 12.7 0.4 1.3 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 NODE_86093_length_186_cov_1.079470_g78152_i0reverse_frame_2 - 0.42 10.5 1.5 0.5 10.2 0.4 1.7 1 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Furin-like_2 PF15913.5 NODE_86089_length_186_cov_1.092715_g78148_i0forward_frame_3 - 0.0087 16.2 2.4 0.009 16.2 2.4 1.0 1 0 0 1 1 1 1 Furin-like repeat, cysteine-rich DUF1985 PF09331.11 NODE_86079_length_186_cov_1.139073_g78138_i0forward_frame_2 - 0.098 12.6 0.3 0.12 12.3 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1985) GP120 PF00516.18 NODE_86073_length_186_cov_1.158940_g78132_i0reverse_frame_3 - 0.036 12.7 0.0 0.038 12.6 0.0 1.0 1 0 0 1 1 1 0 Envelope glycoprotein GP120 Vif PF00559.17 NODE_86065_length_186_cov_1.198675_g78124_i0reverse_frame_3 - 0.05 13.3 0.1 0.055 13.2 0.1 1.0 1 0 0 1 1 1 0 Retroviral Vif (Viral infectivity) protein MSA-2c PF12238.8 NODE_86064_length_186_cov_1.198675_g78123_i0forward_frame_3 - 0.19 11.7 2.4 0.2 11.6 2.4 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c CBS PF00571.28 NODE_86062_length_186_cov_1.211921_g78121_i0reverse_frame_3 - 4e-08 33.6 0.0 4.4e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 CBS domain DUF4596 PF15363.6 NODE_86062_length_186_cov_1.211921_g78121_i0forward_frame_3 - 0.94 9.8 0.1 0.94 9.8 0.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4596) SRCR_2 PF15494.6 NODE_86060_length_186_cov_1.211921_g78119_i0reverse_frame_2 - 0.12 13.0 0.1 0.15 12.6 0.1 1.3 1 1 0 1 1 1 0 Scavenger receptor cysteine-rich domain SoPB_HTH PF18090.1 NODE_86059_length_186_cov_1.211921_g78118_i0forward_frame_3 - 0.086 13.0 0.0 0.094 12.9 0.0 1.2 1 0 0 1 1 1 0 Centromere-binding protein HTH domain SOCS_box PF07525.16 NODE_86059_length_186_cov_1.211921_g78118_i0forward_frame_3 - 0.095 13.1 0.3 0.17 12.3 0.3 1.4 1 0 0 1 1 1 0 SOCS box TetR_C_11 PF16859.5 NODE_86058_length_186_cov_1.211921_g78117_i0forward_frame_2 - 0.014 15.7 0.2 0.021 15.2 0.2 1.4 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain HGWP PF03578.15 NODE_86050_length_186_cov_1.238411_g78109_i0forward_frame_2 - 0.13 11.8 1.3 0.13 11.8 1.3 2.0 2 0 0 2 2 2 0 HGWP repeat RNase_T PF00929.24 NODE_86049_length_186_cov_1.238411_g78108_i0reverse_frame_3 - 4.5e-08 33.8 0.0 4.7e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 Exonuclease PORR PF11955.8 NODE_86046_length_186_cov_1.245033_g78105_i0forward_frame_2 - 0.036 13.0 0.1 0.036 13.0 0.1 1.0 1 0 0 1 1 1 0 Plant organelle RNA recognition domain CSS-motif PF12792.7 NODE_86042_length_186_cov_1.251656_g78101_i0forward_frame_3 - 0.12 11.8 0.1 0.13 11.7 0.1 1.0 1 0 0 1 1 1 0 CSS motif domain associated with EAL DUF591 PF04569.14 NODE_86034_length_186_cov_1.278146_g78093_i0forward_frame_2 - 0.0017 18.3 1.8 0.0023 17.9 1.8 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF1958 PF09211.10 NODE_86031_length_186_cov_1.284768_g78090_i0reverse_frame_2 - 0.064 13.6 0.0 0.11 12.9 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1958) DUF3587 PF12132.8 NODE_86026_length_186_cov_1.298013_g78085_i0forward_frame_2 - 0.0084 15.6 0.4 0.0088 15.5 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3587) Viral_Hsp90 PF03225.14 NODE_86024_length_186_cov_1.304636_g78083_i0reverse_frame_2 - 0.12 10.9 0.3 0.13 10.7 0.3 1.1 1 0 0 1 1 1 0 Viral heat shock protein Hsp90 homologue Toxin_18 PF08087.11 NODE_86022_length_186_cov_1.311258_g78081_i0forward_frame_3 - 0.038 14.0 0.1 0.038 14.0 0.1 2.0 2 0 0 2 2 2 0 Conotoxin O-superfamily PPI_Ypi1 PF07491.11 NODE_86017_length_186_cov_1.317881_g78076_i0forward_frame_2 - 0.2 11.5 1.4 0.28 11.1 1.4 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor ANTAR PF03861.14 NODE_86013_length_186_cov_1.324503_g78072_i0forward_frame_2 - 0.013 15.3 0.1 0.017 14.9 0.1 1.2 1 0 0 1 1 1 0 ANTAR domain Pkinase PF00069.25 NODE_86010_length_186_cov_1.324503_g78069_i0reverse_frame_3 - 0.016 14.6 0.0 0.019 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein kinase domain Myotoxins PF00819.17 NODE_86006_length_186_cov_1.324503_g78065_i0reverse_frame_2 - 0.034 14.4 0.9 0.05 13.9 0.9 1.3 1 0 0 1 1 1 0 Myotoxin, crotamine Copper-fist PF00649.18 NODE_86006_length_186_cov_1.324503_g78065_i0forward_frame_3 - 0.1 12.1 0.3 0.1 12.1 0.3 1.7 2 0 0 2 2 2 0 Copper fist DNA binding domain TRP PF06011.12 NODE_86004_length_186_cov_1.331126_g78063_i0reverse_frame_2 - 0.0031 16.3 2.0 0.0036 16.1 2.0 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel GAGA_bind PF06217.12 NODE_86001_length_186_cov_1.350993_g78060_i0forward_frame_3 - 0.08 13.2 0.0 0.089 13.1 0.0 1.0 1 0 0 1 1 1 0 GAGA binding protein-like family Matrix PF00661.21 NODE_86001_length_186_cov_1.350993_g78060_i0forward_frame_2 - 0.085 11.6 0.0 0.093 11.4 0.0 1.0 1 0 0 1 1 1 0 Viral matrix protein DUF2973 PF11189.8 NODE_85997_length_186_cov_1.377483_g78056_i0reverse_frame_3 - 0.0014 18.6 0.2 0.002 18.2 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2973) DUF2162 PF09930.9 NODE_85997_length_186_cov_1.377483_g78056_i0reverse_frame_3 - 0.01 15.3 0.1 0.011 15.2 0.1 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) Tweety PF04906.13 NODE_85997_length_186_cov_1.377483_g78056_i0reverse_frame_3 - 0.025 13.3 0.1 0.026 13.2 0.1 1.0 1 0 0 1 1 1 0 Tweety DUF4014 PF13198.6 NODE_85997_length_186_cov_1.377483_g78056_i0reverse_frame_3 - 0.04 14.3 0.3 0.05 14.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4014) DUF4485 PF14846.6 NODE_85995_length_186_cov_1.384106_g78054_i0reverse_frame_3 - 0.066 13.3 0.4 0.073 13.1 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4485) GAGA PF09237.11 NODE_85984_length_186_cov_1.417219_g78043_i0forward_frame_2 - 0.0028 17.4 0.1 0.0038 17.0 0.1 1.1 1 0 0 1 1 1 1 GAGA factor PqiA PF04403.13 NODE_85984_length_186_cov_1.417219_g78043_i0forward_frame_2 - 0.0056 16.5 0.4 0.0062 16.4 0.4 1.1 1 0 0 1 1 1 1 Paraquat-inducible protein A zf-FPG_IleRS PF06827.14 NODE_85984_length_186_cov_1.417219_g78043_i0forward_frame_2 - 0.046 13.6 0.8 0.065 13.1 0.8 1.2 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS zinc_ribbon_2 PF13240.6 NODE_85984_length_186_cov_1.417219_g78043_i0forward_frame_2 - 0.083 12.6 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 zinc-ribbon domain Aft1_HRA PF11786.8 NODE_85981_length_186_cov_1.430464_g78040_i0forward_frame_3 - 0.079 13.3 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 Aft1 HRA domain Pox_I6 PF04595.13 NODE_85977_length_186_cov_1.437086_g78036_i0reverse_frame_3 - 0.017 14.1 0.3 0.018 14.0 0.3 1.0 1 0 0 1 1 1 0 Poxvirus I6-like family EamA PF00892.20 NODE_85976_length_186_cov_1.443709_g78035_i0forward_frame_3 - 0.012 15.8 4.9 0.013 15.7 4.9 1.0 1 0 0 1 1 1 0 EamA-like transporter family DUF624 PF04854.14 NODE_85976_length_186_cov_1.443709_g78035_i0forward_frame_3 - 0.015 15.4 2.6 0.035 14.2 2.6 1.9 1 1 0 1 1 1 0 Protein of unknown function, DUF624 7TMR-DISM_7TM PF07695.11 NODE_85976_length_186_cov_1.443709_g78035_i0forward_frame_3 - 0.035 14.0 5.6 0.035 14.0 5.6 1.0 1 0 0 1 1 1 0 7TM diverse intracellular signalling AC_N PF16214.5 NODE_85975_length_186_cov_1.450331_g78034_i0reverse_frame_3 - 0.069 12.3 0.1 0.076 12.1 0.1 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Importin_rep_2 PF18786.1 NODE_85971_length_186_cov_1.470199_g78030_i0forward_frame_3 - 0.05 13.5 0.0 0.084 12.7 0.0 1.3 1 0 0 1 1 1 0 Importin 13 repeat TMEMspv1-c74-12 PF11044.8 NODE_85969_length_186_cov_1.483444_g78028_i0forward_frame_3 - 0.089 12.8 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Cupin_5 PF06172.11 NODE_85966_length_186_cov_1.503311_g78025_i0forward_frame_3 - 0.099 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Cupin superfamily (DUF985) DUF962 PF06127.11 NODE_85965_length_186_cov_1.509934_g78024_i0reverse_frame_3 - 0.06 13.4 0.3 0.062 13.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DUF4634 PF15465.6 NODE_85962_length_186_cov_1.523179_g78021_i0forward_frame_3 - 0.12 12.7 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4634) Toxin_24 PF08094.11 NODE_85960_length_186_cov_1.523179_g78019_i0forward_frame_3 - 0.2 11.5 1.6 0.21 11.4 0.3 1.7 2 0 0 2 2 2 0 Conotoxin TVIIA/GS family DUF188 PF02639.14 NODE_85959_length_186_cov_1.523179_g78018_i0reverse_frame_3 - 0.041 13.6 1.7 0.045 13.4 1.7 1.1 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 RCC1 PF00415.18 NODE_85958_length_186_cov_1.529801_g78017_i0reverse_frame_2 - 9.1e-06 26.2 0.0 0.023 15.3 0.1 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_85958_length_186_cov_1.529801_g78017_i0reverse_frame_2 - 6.4e-05 22.6 0.0 7.8e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat PAP_PilO PF06864.12 NODE_85957_length_186_cov_1.536424_g78016_i0reverse_frame_3 - 0.13 11.1 6.0 0.15 10.9 6.0 1.0 1 0 0 1 1 1 0 Pilin accessory protein (PilO) CAP_N PF01213.19 NODE_85957_length_186_cov_1.536424_g78016_i0reverse_frame_3 - 2.4 7.6 14.1 2.3 7.6 14.1 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_85957_length_186_cov_1.536424_g78016_i0reverse_frame_3 - 7.6 6.5 9.0 7.3 6.6 9.0 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator RFX5_DNA_bdg PF14621.6 NODE_85943_length_186_cov_1.582781_g78002_i0reverse_frame_3 - 0.46 10.2 5.5 0.46 10.2 5.5 1.0 1 0 0 1 1 1 0 RFX5 DNA-binding domain Pannexin_like PF12534.8 NODE_85939_length_186_cov_1.582781_g77998_i0reverse_frame_3 - 1.2 8.2 5.6 1.1 8.3 5.6 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 zf-CCHC_5 PF14787.6 NODE_85932_length_186_cov_1.582781_g77991_i0reverse_frame_2 - 0.83 9.4 3.8 13 5.6 0.1 2.4 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger IPTL-CTERM PF18203.1 NODE_85929_length_186_cov_1.589404_g77988_i0forward_frame_3 - 0.064 13.2 0.1 0.088 12.7 0.1 1.2 1 0 0 1 1 1 0 IPTL-CTERM motif Herpes_UL56 PF04534.12 NODE_85928_length_186_cov_1.589404_g77987_i0forward_frame_2 - 0.047 13.2 0.1 0.047 13.2 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus UL56 protein PHD_3 PF13922.6 NODE_85925_length_186_cov_1.589404_g77984_i0reverse_frame_2 - 0.083 13.3 4.6 0.11 12.9 4.6 1.1 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx RHS PF03527.14 NODE_85917_length_186_cov_1.615894_g77976_i0forward_frame_3 - 0.005 16.6 0.0 0.0068 16.1 0.0 1.2 1 0 0 1 1 1 1 RHS protein DNAJ_related PF12339.8 NODE_85916_length_186_cov_1.615894_g77975_i0forward_frame_3 - 0.0012 19.1 0.4 0.0013 19.0 0.4 1.1 1 0 0 1 1 1 1 DNA-J related protein Sigma_1_2 PF03084.14 NODE_85916_length_186_cov_1.615894_g77975_i0forward_frame_3 - 0.17 11.1 0.6 0.17 11.1 0.6 1.0 1 0 0 1 1 1 0 Reoviral Sigma1/Sigma2 family Ribosomal_L15e PF00827.17 NODE_85914_length_186_cov_1.629139_g77973_i0forward_frame_2 - 6.1e-25 88.1 0.1 6.4e-25 88.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal L15 Propeptide_C1 PF08127.13 NODE_85914_length_186_cov_1.629139_g77973_i0forward_frame_2 - 0.032 14.1 0.3 0.081 12.8 0.1 1.7 1 1 1 2 2 2 0 Peptidase family C1 propeptide Presenilin PF01080.17 NODE_85913_length_186_cov_1.668874_g77972_i0reverse_frame_2 - 0.19 10.5 2.9 0.18 10.5 2.9 1.0 1 0 0 1 1 1 0 Presenilin Sec3_C_2 PF15278.6 NODE_85912_length_186_cov_1.675497_g77971_i0reverse_frame_3 - 0.14 12.5 0.1 0.17 12.2 0.1 1.1 1 0 0 1 1 1 0 Sec3 exocyst complex subunit PTS_EIIA_2 PF00359.22 NODE_85908_length_186_cov_1.688742_g77967_i0reverse_frame_3 - 1.2e-10 41.4 0.0 1.3e-10 41.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMG_box_2 PF09011.10 NODE_85907_length_186_cov_1.695364_g77966_i0forward_frame_2 - 0.00068 20.2 1.0 0.00082 19.9 1.0 1.2 1 0 0 1 1 1 1 HMG-box domain HMG_box PF00505.19 NODE_85907_length_186_cov_1.695364_g77966_i0forward_frame_2 - 0.077 13.4 0.8 0.098 13.1 0.8 1.1 1 0 0 1 1 1 0 HMG (high mobility group) box Neil1-DNA_bind PF09292.10 NODE_85903_length_186_cov_1.708609_g77962_i0forward_frame_3 - 0.11 12.5 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Endonuclease VIII-like 1, DNA bind DUF4635 PF15466.6 NODE_85898_length_186_cov_1.754967_g77957_i0reverse_frame_3 - 0.089 12.3 0.2 0.095 12.2 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4635) KASH PF10541.9 NODE_85898_length_186_cov_1.754967_g77957_i0reverse_frame_3 - 9.4 6.6 15.2 8.4 6.7 13.8 1.7 1 1 1 2 2 2 0 Nuclear envelope localisation domain IMUP PF15761.5 NODE_85898_length_186_cov_1.754967_g77957_i0forward_frame_3 - 0.024 15.3 4.5 0.024 15.3 4.5 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_85898_length_186_cov_1.754967_g77957_i0forward_frame_3 - 0.045 13.4 5.6 0.044 13.4 5.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Spt20 PF12090.8 NODE_85898_length_186_cov_1.754967_g77957_i0forward_frame_2 - 0.052 13.2 3.6 0.05 13.2 3.6 1.0 1 0 0 1 1 1 0 Spt20 family DUF2456 PF10445.9 NODE_85897_length_186_cov_1.754967_g77956_i0reverse_frame_3 - 0.13 12.4 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2456) ESPR PF13018.6 NODE_85897_length_186_cov_1.754967_g77956_i0reverse_frame_3 - 0.19 11.5 0.1 0.31 10.9 0.1 1.3 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system MPS-4 PF17523.2 NODE_85895_length_186_cov_1.761589_g77954_i0reverse_frame_2 - 0.48 10.6 2.7 0.63 10.2 2.7 1.2 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF3531 PF12049.8 NODE_85893_length_186_cov_1.761589_g77952_i0reverse_frame_3 - 0.13 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3531) DctP PF03480.13 NODE_85890_length_186_cov_1.788079_g77949_i0forward_frame_2 - 1.7e-22 80.1 0.0 1.8e-22 80.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein, family 7 TIR_3 PF18567.1 NODE_85889_length_186_cov_1.794702_g77948_i0reverse_frame_3 - 0.049 13.6 0.0 0.051 13.6 0.0 1.0 1 0 0 1 1 1 0 Toll/interleukin-1 receptor domain Phe_tRNA-synt_N PF02912.18 NODE_85887_length_186_cov_1.807947_g77946_i0forward_frame_2 - 0.038 13.9 0.0 0.049 13.6 0.0 1.1 1 0 0 1 1 1 0 Aminoacyl tRNA synthetase class II, N-terminal domain CxC6 PF18721.1 NODE_85883_length_186_cov_1.827815_g77942_i0reverse_frame_2 - 0.0043 17.3 1.0 0.0047 17.2 1.0 1.2 1 0 0 1 1 1 1 CxC6 like cysteine cluster associated with KDZ transposases RNase_J_C PF17770.1 NODE_85882_length_186_cov_1.834437_g77941_i0reverse_frame_3 - 0.097 13.7 0.1 0.12 13.4 0.1 1.1 1 0 0 1 1 1 0 Ribonuclease J C-terminal domain SRP9-21 PF05486.12 NODE_85880_length_186_cov_1.847682_g77939_i0reverse_frame_2 - 0.0068 16.8 0.2 0.0077 16.6 0.2 1.1 1 0 0 1 1 1 1 Signal recognition particle 9 kDa protein (SRP9) NUC205 PF08168.11 NODE_85879_length_186_cov_1.847682_g77938_i0forward_frame_2 - 0.17 11.4 0.6 0.25 10.9 0.6 1.3 1 0 0 1 1 1 0 NUC205 domain AP4E_app_platf PF14807.6 NODE_85877_length_186_cov_1.854305_g77936_i0forward_frame_3 - 0.098 13.0 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform Fer4_6 PF12837.7 NODE_85874_length_186_cov_1.867550_g77933_i0reverse_frame_2 - 0.024 14.7 0.5 0.031 14.4 0.5 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain Defensin_int PF17858.1 NODE_85870_length_186_cov_1.887417_g77929_i0reverse_frame_3 - 0.048 13.7 2.7 0.048 13.7 2.7 1.6 2 0 0 2 2 2 0 Platypus intermediate defensin-like peptide FXMR_C2 PF16098.5 NODE_85866_length_186_cov_1.933775_g77925_i0reverse_frame_3 - 0.11 13.0 0.4 0.13 12.8 0.4 1.0 1 0 0 1 1 1 0 Fragile X-related mental retardation protein C-terminal region 2 DUF4996 PF16387.5 NODE_85858_length_186_cov_1.973510_g77917_i0reverse_frame_2 - 0.029 14.8 0.4 0.035 14.6 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function SHP PF03579.13 NODE_85855_length_186_cov_1.980132_g77914_i0reverse_frame_2 - 0.023 14.7 0.8 0.033 14.2 0.8 1.3 1 0 0 1 1 1 0 Small hydrophobic protein zf-C2H2 PF00096.26 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.0009 19.6 1.7 0.0009 19.6 1.7 2.1 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.0022 18.7 1.3 0.0022 18.7 1.3 2.4 3 0 0 3 3 3 1 C2H2-type zinc finger zf-C2H2_2 PF12756.7 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.0069 16.7 3.5 0.0092 16.3 3.5 1.3 1 1 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.0082 16.4 0.7 0.0082 16.4 0.7 1.9 3 0 0 3 3 3 1 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.036 14.1 1.6 0.036 14.1 1.6 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2HE PF16278.5 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.16 12.5 4.3 0.17 12.3 4.2 1.4 1 1 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger DUF3772 PF12607.8 NODE_85851_length_186_cov_2.006623_g77910_i0reverse_frame_2 - 0.054 13.3 0.1 0.087 12.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) ABM PF03992.16 NODE_85850_length_186_cov_2.006623_g77909_i0forward_frame_2 - 3.3e-10 39.9 0.0 3.5e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF2752 PF10825.8 NODE_85848_length_186_cov_2.019868_g77907_i0reverse_frame_2 - 0.046 13.8 1.1 0.072 13.2 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) DUF1624 PF07786.12 NODE_85845_length_186_cov_2.026490_g77904_i0reverse_frame_2 - 0.072 12.6 0.2 0.087 12.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1624) Nepo_coat_N PF03689.15 NODE_85842_length_186_cov_2.072848_g77901_i0forward_frame_2 - 0.045 13.7 0.1 0.052 13.5 0.1 1.1 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain DUF1571 PF07608.11 NODE_85832_length_186_cov_2.119205_g77891_i0reverse_frame_2 - 0.035 13.6 0.0 0.035 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1571) DUF4085 PF13315.6 NODE_85828_length_186_cov_2.132450_g77887_i0forward_frame_2 - 0.082 12.5 0.0 0.082 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4085) BES1_N PF05687.13 NODE_85826_length_186_cov_2.185430_g77885_i0reverse_frame_3 - 2.7 8.3 6.4 2.8 8.3 6.4 1.1 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal DUF3432 PF11914.8 NODE_85826_length_186_cov_2.185430_g77885_i0reverse_frame_3 - 9.7 6.5 20.4 12 6.2 20.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) DUF3824 PF12868.7 NODE_85821_length_186_cov_2.231788_g77880_i0reverse_frame_3 - 0.033 14.8 1.0 0.033 14.8 1.0 1.3 1 1 0 1 1 1 0 Domain of unknwon function (DUF3824) DUF3915 PF13054.6 NODE_85821_length_186_cov_2.231788_g77880_i0reverse_frame_3 - 0.59 10.1 9.7 0.091 12.8 4.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3915) Cas_CXXC_CXXC PF09706.10 NODE_85818_length_186_cov_2.245033_g77877_i0forward_frame_2 - 0.056 13.7 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) Ctr PF04145.15 NODE_85816_length_186_cov_2.258278_g77875_i0reverse_frame_3 - 0.011 16.4 0.0 0.011 16.3 0.0 1.0 1 0 0 1 1 1 0 Ctr copper transporter family Pox_A32 PF04665.12 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 1.1e-06 28.3 0.0 1.2e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein NACHT PF05729.12 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.00013 21.9 0.0 0.00015 21.7 0.0 1.1 1 0 0 1 1 1 1 NACHT domain DUF2075 PF09848.9 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.00059 19.2 0.0 0.00059 19.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0033 17.7 0.0 0.0037 17.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0035 17.0 0.0 0.0046 16.7 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain NB-ARC PF00931.22 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0045 16.2 0.0 0.0048 16.1 0.0 1.1 1 0 0 1 1 1 1 NB-ARC domain FtsK_SpoIIIE PF01580.18 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0056 16.1 0.0 0.0065 15.8 0.0 1.0 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_16 PF13191.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0062 16.9 0.0 0.0062 16.9 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain cobW PF02492.19 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0065 16.1 0.1 0.0073 15.9 0.1 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain T2SSE PF00437.20 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0066 15.5 0.0 0.0068 15.5 0.0 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_25 PF13481.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0074 15.9 0.0 0.0079 15.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.012 14.9 0.0 0.014 14.7 0.0 1.0 1 0 0 1 1 1 0 Zeta toxin DAP3 PF10236.9 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.015 14.5 0.1 0.017 14.3 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 MobB PF03205.14 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.016 15.1 0.1 0.017 15.0 0.1 1.1 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_7 PF12775.7 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.03 13.8 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region ATPase_2 PF01637.18 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.033 14.1 0.0 0.036 14.0 0.0 1.0 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.043 13.5 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.047 14.2 0.1 0.048 14.2 0.1 1.1 1 0 0 1 1 1 0 ABC transporter DUF463 PF04317.12 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.075 12.0 0.1 0.075 12.0 0.1 1.0 1 0 0 1 1 1 0 YcjX-like family, DUF463 CbiA PF01656.23 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.085 12.9 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RNA_helicase PF00910.22 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.1 13.0 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 RNA helicase KAP_NTPase PF07693.14 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.1 11.8 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 KAP family P-loop domain SRPRB PF09439.10 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit NTPase_1 PF03266.15 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.14 12.0 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 NTPase TrwB_AAD_bind PF10412.9 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.14 11.0 0.0 0.15 10.9 0.0 1.0 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_14 PF13173.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.16 12.0 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain Septin PF00735.18 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.17 11.1 0.1 0.22 10.8 0.1 1.1 1 0 0 1 1 1 0 Septin RsgA_GTPase PF03193.16 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.18 11.7 0.1 0.21 11.5 0.1 1.1 1 0 0 1 1 1 0 RsgA GTPase Sigma54_activat PF00158.26 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.24 11.1 0.0 0.25 11.0 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_23 PF13476.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.25 11.8 0.1 0.26 11.7 0.1 1.1 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.3 11.3 0.1 0.33 11.2 0.1 1.1 1 0 0 1 1 1 0 AAA domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks415.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks415.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks415.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks415.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SAM_3 PF18016.1 NODE_85804_length_186_cov_2.357616_g77863_i0forward_frame_2 - 0.0031 17.3 0.0 0.004 16.9 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) HrpE PF06188.12 NODE_85792_length_186_cov_2.516556_g77851_i0reverse_frame_3 - 0.005 16.7 1.2 0.005 16.7 1.2 1.1 1 0 0 1 1 1 1 HrpE/YscL/FliH and V-type ATPase subunit E Nbl1_Borealin_N PF10444.9 NODE_85792_length_186_cov_2.516556_g77851_i0reverse_frame_3 - 0.019 14.6 0.6 0.035 13.8 0.6 1.5 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal CCDC-167 PF15188.6 NODE_85791_length_186_cov_2.529801_g77850_i0reverse_frame_3 - 0.055 13.8 0.0 0.066 13.6 0.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 DNA_pol_A_exo1 PF01612.20 NODE_85790_length_186_cov_2.562914_g77849_i0forward_frame_2 - 0.031 14.0 0.3 0.033 13.9 0.3 1.2 1 1 0 1 1 1 0 3'-5' exonuclease UPF0302 PF08864.10 NODE_85790_length_186_cov_2.562914_g77849_i0forward_frame_2 - 0.032 14.3 1.3 0.037 14.1 1.3 1.1 1 0 0 1 1 1 0 UPF0302 domain Flavi_capsid PF01003.19 NODE_85790_length_186_cov_2.562914_g77849_i0forward_frame_2 - 0.054 13.3 0.9 0.072 12.9 0.6 1.4 1 1 0 1 1 1 0 Flavivirus capsid protein C Rab_bind PF16704.5 NODE_85790_length_186_cov_2.562914_g77849_i0forward_frame_2 - 0.069 13.2 0.3 0.093 12.8 0.3 1.3 1 1 0 1 1 1 0 Rab binding domain RNA_GG_bind PF10258.9 NODE_85787_length_186_cov_2.589404_g77846_i0forward_frame_3 - 7e-08 32.4 0.0 7.8e-08 32.3 0.0 1.0 1 0 0 1 1 1 1 PHAX RNA-binding domain Fst_toxin PF13955.6 NODE_85786_length_186_cov_2.596026_g77845_i0forward_frame_2 - 0.13 12.2 0.5 0.26 11.3 0.5 1.5 1 0 0 1 1 1 0 Toxin Fst, type I toxin-antitoxin system DUF2448 PF10476.9 NODE_85779_length_186_cov_2.748344_g77838_i0forward_frame_3 - 0.024 14.5 0.3 0.025 14.4 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2448) tRNA_anti-codon PF01336.25 NODE_85778_length_186_cov_2.761589_g77837_i0reverse_frame_3 - 0.0014 18.5 0.1 0.0032 17.4 0.1 1.6 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain Dus PF01207.17 NODE_85777_length_186_cov_2.781457_g77836_i0reverse_frame_2 - 3.8e-08 32.8 0.0 4e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) AtpR PF12966.7 NODE_85769_length_186_cov_2.986755_g77828_i0forward_frame_2 - 0.023 15.1 1.7 0.027 14.9 1.7 1.1 1 0 0 1 1 1 0 N-ATPase, AtpR subunit FlpD PF02662.16 NODE_85768_length_186_cov_3.019868_g77827_i0reverse_frame_3 - 0.046 13.7 0.0 0.053 13.5 0.0 1.0 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit DUF5500 PF17604.2 NODE_85765_length_186_cov_3.105960_g77824_i0reverse_frame_3 - 0.15 12.2 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5500) Citrate_synt PF00285.21 NODE_85765_length_186_cov_3.105960_g77824_i0forward_frame_3 - 8e-07 28.4 0.5 8.3e-07 28.4 0.5 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Tubulin PF00091.25 NODE_85764_length_186_cov_3.119205_g77823_i0reverse_frame_3 - 2.6e-10 40.9 0.0 3e-10 40.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain TAS2R PF05296.13 NODE_85763_length_186_cov_3.152318_g77822_i0forward_frame_3 - 0.11 11.6 3.4 0.12 11.5 3.4 1.1 1 0 0 1 1 1 0 Taste receptor protein (TAS2R) Ribosomal_S9 PF00380.19 NODE_85761_length_186_cov_3.655629_g77820_i0forward_frame_3 - 5.3 7.6 6.6 7.1 7.2 6.6 1.2 1 0 0 1 1 1 0 Ribosomal protein S9/S16 Spc7_N PF15402.6 NODE_85757_length_186_cov_4.304636_g77816_i0reverse_frame_3 - 4 5.6 10.3 4.3 5.5 10.3 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 Arm-DNA-bind_3 PF13356.6 NODE_85756_length_186_cov_4.456954_g77815_i0reverse_frame_2 - 0.059 13.8 1.9 0.16 12.4 1.9 1.7 1 1 0 1 1 1 0 Arm DNA-binding domain DUF4217 PF13959.6 NODE_85752_length_186_cov_8.589404_g77811_i0reverse_frame_2 - 0.14 12.4 3.7 4.6 7.5 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4217) VWA_CoxE PF05762.14 NODE_85750_length_186_cov_12.311258_g77809_i0reverse_frame_3 - 0.071 12.5 0.0 0.081 12.3 0.0 1.0 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein Col_cuticle_N PF01484.17 NODE_85745_length_186_cov_22.152318_g77804_i0reverse_frame_2 - 1.4 9.1 5.3 1 9.5 1.8 1.9 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain DUF948 PF06103.11 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.0059 16.8 0.6 0.0064 16.7 0.6 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) ApoLp-III PF07464.11 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.017 15.2 0.9 0.019 15.1 0.9 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Med21 PF11221.8 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.033 14.5 0.5 0.037 14.3 0.5 1.0 1 0 0 1 1 1 0 Subunit 21 of Mediator complex RVT_3 PF13456.6 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.067 13.0 0.2 0.08 12.8 0.2 1.1 1 0 0 1 1 1 0 Reverse transcriptase-like DUF3916 PF13079.6 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.068 13.1 0.4 0.08 12.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) POX PF07526.11 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.071 13.7 0.1 0.079 13.5 0.1 1.1 1 0 0 1 1 1 0 Associated with HOX Enolase_N PF03952.16 NODE_85741_length_186_cov_25.218543_g77800_i0reverse_frame_2 - 0.15 12.2 0.1 0.16 12.1 0.1 1.0 1 0 0 1 1 1 0 Enolase, N-terminal domain Gal_mutarotas_2 PF13802.6 NODE_85740_length_186_cov_26.026490_g77799_i0reverse_frame_3 - 0.01 16.1 0.1 0.016 15.5 0.1 1.3 1 0 0 1 1 1 0 Galactose mutarotase-like Lung_7-TM_R PF06814.13 NODE_85736_length_186_cov_27.887417_g77795_i0reverse_frame_3 - 0.0092 15.3 0.1 0.01 15.1 0.1 1.0 1 0 0 1 1 1 1 Lung seven transmembrane receptor Babuvirus_MP PF07234.11 NODE_85730_length_186_cov_31.536424_g77789_i0forward_frame_2 - 0.031 14.4 1.3 0.031 14.4 1.3 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF1676 PF07898.13 NODE_85729_length_186_cov_31.602649_g77788_i0reverse_frame_3 - 0.033 14.2 0.8 0.037 14.1 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF5346 PF17281.2 NODE_85718_length_186_cov_34.384106_g77777_i0reverse_frame_3 - 0.071 13.1 0.0 0.073 13.1 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5346) Herpes_UL92 PF03048.14 NODE_85718_length_186_cov_34.384106_g77777_i0forward_frame_2 - 0.16 11.7 0.1 0.17 11.6 0.1 1.0 1 0 0 1 1 1 0 UL92 family Ribosomal_L23eN PF03939.13 NODE_85712_length_186_cov_38.000000_g77771_i0forward_frame_3 - 1.3 9.3 5.0 2.2 8.6 5.0 1.6 1 1 0 1 1 1 0 Ribosomal protein L23, N-terminal domain DUF4819 PF16090.5 NODE_85707_length_186_cov_39.754967_g77766_i0reverse_frame_2 - 0.1 12.7 0.1 0.4 10.8 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4819) DGF-1_5 PF11038.8 NODE_85701_length_186_cov_42.688742_g77760_i0forward_frame_3 - 0.022 14.1 0.1 0.023 14.0 0.1 1.1 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 GlyL_C PF12524.8 NODE_85700_length_186_cov_43.046358_g77759_i0reverse_frame_2 - 0.45 10.7 4.4 0.15 12.2 0.9 1.7 2 0 0 2 2 2 0 dsDNA virus glycoprotein L C terminal GSG-1 PF07803.11 NODE_85700_length_186_cov_43.046358_g77759_i0forward_frame_3 - 0.086 12.8 0.1 0.095 12.6 0.1 1.1 1 0 0 1 1 1 0 GSG1-like protein SBF PF01758.16 NODE_85699_length_186_cov_44.761589_g77758_i0reverse_frame_2 - 0.0055 16.4 0.0 0.0057 16.4 0.0 1.0 1 0 0 1 1 1 1 Sodium Bile acid symporter family TORC_N PF12884.7 NODE_85695_length_186_cov_50.370861_g77754_i0reverse_frame_2 - 0.017 15.9 0.8 0.02 15.7 0.8 1.2 1 0 0 1 1 1 0 Transducer of regulated CREB activity, N terminus Med8 PF10232.9 NODE_85693_length_186_cov_52.105960_g77752_i0reverse_frame_2 - 1.9 8.0 5.2 2.2 7.8 5.2 1.0 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 CENP-B_dimeris PF09026.10 NODE_85693_length_186_cov_52.105960_g77752_i0reverse_frame_2 - 6 7.3 17.3 1.4 9.4 14.2 1.5 1 1 1 2 2 2 0 Centromere protein B dimerisation domain VPDSG-CTERM PF18205.1 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_3 - 0.036 13.9 2.7 0.036 13.9 2.7 2.3 2 0 0 2 2 2 0 VPDSG-CTERM motif COX15-CtaA PF02628.15 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_3 - 0.15 11.1 4.7 0.17 10.9 4.7 1.0 1 0 0 1 1 1 0 Cytochrome oxidase assembly protein DUF4131 PF13567.6 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_3 - 0.7 9.5 7.7 0.74 9.4 7.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3290 PF11694.8 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_3 - 4.5 7.2 5.6 5.5 7.0 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) zf-ACC PF17848.1 NODE_85688_length_186_cov_59.033113_g77747_i0forward_frame_3 - 0.22 11.6 0.6 0.22 11.6 0.6 1.6 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain T4BSS_DotH_IcmK PF12293.8 NODE_85680_length_186_cov_71.715232_g77739_i0reverse_frame_2 - 0.039 13.2 0.0 0.047 12.9 0.0 1.1 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion PTPlike_phytase PF14566.6 NODE_85679_length_186_cov_72.536424_g77738_i0forward_frame_3 - 0.031 14.4 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Inositol hexakisphosphate zf_CCCH_5 PF18384.1 NODE_85675_length_186_cov_76.854305_g77734_i0forward_frame_2 - 1.1 9.5 0.1 1.1 9.5 0.1 2.8 2 1 1 3 3 3 0 Unkempt Zinc finger domain 1 (Znf1) Rrn6 PF10214.9 NODE_85673_length_186_cov_79.092715_g77732_i0reverse_frame_2 - 0.045 12.2 2.0 0.044 12.3 2.0 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Pox_I3 PF04661.12 NODE_85669_length_186_cov_88.854305_g77728_i0reverse_frame_3 - 0.24 10.5 0.0 0.28 10.3 0.0 1.0 1 0 0 1 1 1 0 Poxvirus I3 ssDNA-binding protein 5-FTHF_cyc-lig PF01812.20 NODE_85666_length_186_cov_99.079470_g77725_i0forward_frame_3 - 1.5e-06 28.2 0.1 1.7e-06 28.0 0.1 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Coagulin PF02035.15 NODE_85665_length_186_cov_100.410596_g77724_i0reverse_frame_2 - 0.027 14.3 0.2 0.03 14.2 0.2 1.0 1 0 0 1 1 1 0 Coagulin VESA1_N PF12785.7 NODE_85662_length_186_cov_165.847682_g77721_i0reverse_frame_2 - 1.6 7.6 7.2 1.7 7.5 7.2 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Ost5 PF05251.12 NODE_85654_length_186_cov_2580.509934_g77713_i0reverse_frame_3 - 0.00024 21.3 0.0 0.00027 21.1 0.0 1.1 1 0 0 1 1 1 1 Oligosaccharyltransferase subunit 5 SR-25 PF10500.9 NODE_85653_length_186_cov_4498.622517_g77712_i0forward_frame_2 - 0.4 10.3 9.0 0.44 10.1 9.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Yopt PF09467.10 ORF99989 - 0.024 14.7 0.1 1.4 9.1 0.0 2.1 2 0 0 2 2 2 0 Hypothetical protein Yopt EspF PF04806.12 ORF99440 - 0.049 14.0 1.7 0.074 13.5 1.7 1.3 1 0 0 1 1 1 0 EspF protein repeat HisKA_2 PF07568.12 ORF9897 - 0.0048 16.9 0.3 0.0053 16.8 0.3 1.1 1 0 0 1 1 1 1 Histidine kinase SipA_VBS PF17985.1 ORF98911 - 9.8 6.3 7.4 0.27 11.2 1.1 1.6 2 0 0 2 2 2 0 SipA vinculin binding site Metallophos PF00149.28 ORF98489 - 0.0002 21.9 0.1 0.0002 21.9 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase RsgA_GTPase PF03193.16 ORF98489 - 0.13 12.2 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase MORN PF02493.20 ORF98345 - 0.0029 17.4 3.1 0.11 12.4 0.6 2.2 2 0 0 2 2 2 2 MORN repeat DUF5053 PF16476.5 ORF98207 - 0.048 13.3 0.0 0.29 10.8 0.0 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF5053) FoP_duplication PF13865.6 ORF98068 - 0.46 11.1 11.7 0.5 10.9 11.7 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 Tam41_Mmp37 PF09139.11 ORF97904 - 0.041 13.3 0.0 0.041 13.3 0.0 1.0 1 0 0 1 1 1 0 Phosphatidate cytidylyltransferase, mitochondrial BLYB PF05289.11 ORF97511 - 0.0065 16.7 1.8 0.0071 16.6 1.8 1.0 1 0 0 1 1 1 1 Borrelia hemolysin accessory protein DUF4570 PF15134.6 ORF97511 - 0.2 11.7 6.3 0.22 11.6 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4570) DivIC PF04977.15 ORF97511 - 1.1 9.1 7.3 0.55 10.0 3.8 1.9 1 1 1 2 2 2 0 Septum formation initiator Agouti PF05039.12 ORF97398 - 0.8 10.5 8.9 0.47 11.2 7.2 1.6 1 1 0 1 1 1 0 Agouti protein DUF4349 PF14257.6 ORF97383 - 0.032 13.7 1.8 0.038 13.4 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) HSBP1 PF06825.12 ORF97383 - 0.061 13.2 1.8 0.26 11.2 1.8 1.9 1 1 0 1 1 1 0 Heat shock factor binding protein 1 XhlA PF10779.9 ORF97383 - 0.061 13.5 4.9 0.071 13.3 4.9 1.1 1 0 0 1 1 1 0 Haemolysin XhlA FlaC_arch PF05377.11 ORF97383 - 0.068 13.6 6.2 0.38 11.2 6.2 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Fe_dep_repr_C PF02742.15 ORF97383 - 0.085 13.0 0.2 2.8 8.1 0.1 2.0 2 0 0 2 2 2 0 Iron dependent repressor, metal binding and dimerisation domain MtrB PF05440.12 ORF97383 - 0.1 13.0 0.7 0.12 12.8 0.7 1.3 1 1 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B DUF1664 PF07889.12 ORF97383 - 0.11 12.6 1.4 0.13 12.3 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4201 PF13870.6 ORF97227 - 0.056 13.2 0.4 0.057 13.2 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) PHD_4 PF16866.5 ORF97175 - 1.2 9.3 7.7 1.8 8.7 7.7 1.4 1 1 0 1 1 1 0 PHD-finger DUF5026 PF16429.5 ORF96726 - 0.15 12.2 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5026) COX2 PF00116.20 ORF96606 - 0.02 14.8 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain NADHdh PF00146.21 ORF96602 - 0.00052 19.4 3.5 0.00052 19.4 3.5 1.1 1 0 0 1 1 1 1 NADH dehydrogenase FYVE PF01363.21 ORF96458 - 0.33 11.1 5.4 0.38 10.9 5.4 1.4 1 1 0 1 1 1 0 FYVE zinc finger DUF4113 PF13438.6 ORF95807 - 0.16 12.1 0.4 0.16 12.1 0.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4113) Helicase_Sgs1 PF11408.8 ORF9554 - 0.039 14.0 0.1 0.044 13.8 0.1 1.1 1 0 0 1 1 1 0 Sgs1 RecQ helicase EMP70 PF02990.16 ORF9554 - 0.09 11.4 1.1 0.092 11.4 1.1 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 Cytochrome-c551 PF10643.9 ORF95172 - 0.089 12.4 0.7 0.088 12.4 0.7 1.0 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 Glutaredoxin PF00462.24 ORF95048 - 1.8e-05 24.9 0.0 3.5e-05 23.9 0.0 1.4 2 0 0 2 2 2 1 Glutaredoxin AAA_26 PF13500.6 ORF94772 - 0.078 12.8 0.0 0.08 12.7 0.0 1.0 1 0 0 1 1 1 0 AAA domain Lysis_col PF02402.16 ORF94342 - 0.073 12.8 0.5 0.073 12.8 0.5 1.6 2 1 0 2 2 2 0 Lysis protein Ion_trans PF00520.31 ORF94330 - 0.0016 17.7 6.4 0.0016 17.7 6.4 1.0 1 0 0 1 1 1 1 Ion transport protein NapE PF06796.11 ORF94128 - 0.093 12.3 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE Lambda_Bor PF06291.11 ORF93759 - 0.068 13.2 0.4 0.087 12.9 0.4 1.3 1 0 0 1 1 1 0 Bor protein COX14 PF14880.6 ORF93759 - 6 6.8 5.1 9.2 6.2 5.1 1.3 1 1 0 1 1 1 0 Cytochrome oxidase c assembly zf-H3C2 PF16721.5 ORF93737 - 0.023 15.1 2.1 0.028 14.8 2.1 1.3 1 1 0 1 1 1 0 Zinc-finger like, probable DNA-binding UvsW PF11637.8 ORF93161 - 0.019 15.1 0.1 0.033 14.3 0.1 1.4 1 0 0 1 1 1 0 ATP-dependant DNA helicase UvsW Exonuc_VII_S PF02609.16 ORF93161 - 0.039 14.0 0.3 0.29 11.2 0.1 2.0 1 1 1 2 2 2 0 Exonuclease VII small subunit Ribosomal_L18 PF17135.4 ORF93096 - 2e-23 82.8 1.9 2.2e-23 82.7 1.9 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Myb_DNA-binding PF00249.31 ORF92581 - 0.00018 21.6 0.1 0.0003 20.9 0.1 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF92581 - 0.0005 20.3 0.4 0.00072 19.8 0.4 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Peptidase_S49_N PF08496.10 ORF92581 - 0.11 12.5 0.5 0.13 12.3 0.5 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal CsrA PF02599.16 ORF92375 - 2.3e-27 94.7 1.5 2.6e-27 94.5 1.5 1.0 1 0 0 1 1 1 1 Global regulator protein family S1 PF00575.23 ORF92375 - 0.031 14.6 0.6 0.16 12.3 0.4 1.8 1 1 1 2 2 2 0 S1 RNA binding domain DUF5347 PF17282.2 ORF92285 - 0.19 12.1 0.0 0.22 11.8 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5347) Pox_RNA_pol_35 PF03396.15 ORF91623 - 0.012 14.9 0.1 0.013 14.8 0.1 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 35 kD subunit COX7a PF02238.15 ORF91587 - 0.023 15.1 1.5 0.023 15.1 1.5 1.5 1 1 0 1 1 1 0 Cytochrome c oxidase subunit VII TOM13 PF08219.11 ORF91587 - 0.15 12.1 0.3 0.16 11.9 0.3 1.2 1 0 0 1 1 1 0 Outer membrane protein TOM13 Defensin_beta PF00711.19 ORF91440 - 0.022 14.8 0.1 0.038 14.0 0.1 1.4 1 0 0 1 1 1 0 Beta defensin RCC1_2 PF13540.6 ORF91400 - 0.024 14.4 0.0 0.037 13.8 0.0 1.3 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 ORF91400 - 0.21 10.1 0.0 0.23 9.9 0.0 1.0 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase AI-2E_transport PF01594.16 ORF91272 - 9.7e-13 48.0 5.7 1.1e-12 47.8 5.7 1.1 1 0 0 1 1 1 1 AI-2E family transporter PHO4 PF01384.20 ORF91192 - 8.4 5.3 7.0 9.1 5.2 7.0 1.0 1 0 0 1 1 1 0 Phosphate transporter family UIM PF02809.20 ORF90876 - 0.77 9.8 3.8 0.96 9.5 0.7 2.3 2 0 0 2 2 2 0 Ubiquitin interaction motif Tetradecapep PF08187.11 ORF90846 - 0.065 13.3 0.0 0.065 13.3 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family Arrestin_N PF00339.29 ORF90446 - 0.11 12.6 0.0 0.11 12.6 0.0 1.0 1 0 0 1 1 1 0 Arrestin (or S-antigen), N-terminal domain CadC_C1 PF18500.1 ORF90388 - 0.043 13.9 0.1 0.043 13.9 0.1 1.0 1 0 0 1 1 1 0 CadC C-terminal domain 1 adh_short_C2 PF13561.6 ORF90360 - 4.5e-08 32.9 0.0 4.6e-08 32.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF90360 - 0.0046 16.4 0.0 0.0052 16.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Radial_spoke_3 PF06098.11 ORF8925 - 0.16 11.2 2.4 0.15 11.3 2.4 1.0 1 0 0 1 1 1 0 Radial spoke protein 3 Thioredoxin_7 PF13899.6 ORF88842 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Nucleoside_tran PF01733.18 ORF8875 - 0.022 14.2 0.3 0.022 14.2 0.3 1.0 1 0 0 1 1 1 0 Nucleoside transporter DUF4006 PF13179.6 ORF8875 - 0.082 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF4006) Homeodomain PF00046.29 ORF88643 - 1.1e-05 25.2 2.4 1.3e-05 24.9 2.4 1.1 1 0 0 1 1 1 1 Homeodomain DcpS PF05652.12 ORF88643 - 0.047 14.5 0.4 0.053 14.4 0.4 1.1 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme (DcpS) N-terminal UL16 PF17622.2 ORF88028 - 0.037 13.7 0.1 0.039 13.6 0.1 1.1 1 0 0 1 1 1 0 Viral unique long protein 16 DUF4359 PF14271.6 ORF87928 - 0.063 14.0 0.0 0.073 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4359) Phage_terminase PF10668.9 ORF87776 - 0.03 14.3 0.1 5.7 7.0 0.1 2.1 2 0 0 2 2 2 0 Phage terminase small subunit SF3A3 PF16837.5 ORF87616 - 0.05 14.1 0.1 0.054 14.0 0.1 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 FliS PF02561.14 ORF87616 - 0.064 13.5 0.1 0.074 13.3 0.1 1.2 1 0 0 1 1 1 0 Flagellar protein FliS GSHPx PF00255.19 ORF86996 - 6.9e-05 22.4 0.0 9.2e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Glutathione peroxidase ERCC3_RAD25_C PF16203.5 ORF86996 - 0.19 10.9 0.0 0.19 10.9 0.0 1.0 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase DUF4705 PF15788.5 ORF86729 - 0.26 11.6 2.4 0.41 10.9 2.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4705) Ank_5 PF13857.6 ORF86722 - 0.0044 17.3 0.0 0.0068 16.7 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF86722 - 0.096 13.3 0.0 0.24 12.0 0.0 1.7 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Pkinase PF00069.25 ORF86469 - 9.1e-06 25.2 0.3 9.5e-06 25.2 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain zinc-ribbon_6 PF10005.9 ORF86406 - 0.04 14.6 1.5 0.049 14.3 1.5 1.3 1 1 0 1 1 1 0 zinc-ribbon domain Homeodomain PF00046.29 ORF86111 - 0.049 13.5 0.2 0.049 13.5 0.2 1.5 2 0 0 2 2 2 0 Homeodomain COX1 PF00115.20 ORF86041 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF86041 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) IBV_3A PF03617.13 ORF85754 - 0.063 13.3 0.0 0.072 13.1 0.0 1.2 1 0 0 1 1 1 0 IBV 3A protein DUF4485 PF14846.6 ORF85754 - 0.12 12.4 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4485) DUF1987 PF09345.10 ORF85754 - 0.14 11.9 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) Sugar_tr PF00083.24 ORF85102 - 1.4 7.7 3.7 1.6 7.5 3.7 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter Thioredoxin_7 PF13899.6 ORF84891 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like DUF1298 PF06974.13 ORF8484 - 0.0046 16.9 0.0 0.0049 16.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) LuxT_C PF18285.1 ORF84675 - 0.0052 17.3 0.3 0.0052 17.3 0.3 1.0 1 0 0 1 1 1 1 Tetracycline repressor LuxT C-terminal domain COX1 PF00115.20 ORF8450 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF8450 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) Jiraiya PF15038.6 ORF84466 - 0.047 13.1 0.1 0.05 13.0 0.1 1.0 1 0 0 1 1 1 0 Jiraiya Topoisom_bac PF01131.20 ORF84251 - 8.3e-06 25.0 0.0 8.3e-06 25.0 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Asp PF00026.23 ORF83772 - 0.00067 19.2 0.0 0.0007 19.1 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease BBS2_Mid PF14783.6 ORF83772 - 0.049 13.7 0.0 0.049 13.7 0.0 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, middle region ECH_2 PF16113.5 ORF83505 - 7e-11 42.2 0.0 7.9e-11 42.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF1681 PF07933.14 ORF83500 - 2.7e-07 30.4 0.0 3e-07 30.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1681) EF-hand_1 PF00036.32 ORF83465 - 8.7e-05 21.8 0.3 0.00017 20.9 0.3 1.6 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 ORF83465 - 0.00013 21.3 0.8 0.00018 20.9 0.1 1.6 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF83465 - 0.00034 20.3 0.4 0.0006 19.5 0.4 1.5 1 1 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF83465 - 0.00048 20.5 0.1 0.00048 20.5 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF83465 - 0.056 13.3 0.0 0.072 12.9 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair MORN PF02493.20 ORF83241 - 7.5e-13 47.6 16.0 5.2e-06 26.0 2.9 3.1 3 0 0 3 3 3 3 MORN repeat Thioredoxin_7 PF13899.6 ORF8281 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Ribosomal_S20p PF01649.18 ORF82323 - 3.5e-18 66.0 4.2 3.8e-18 65.9 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S20 Terpene_synth_C PF03936.16 ORF82297 - 0.028 13.8 0.2 0.028 13.8 0.2 1.0 1 0 0 1 1 1 0 Terpene synthase family, metal binding domain DUF5409 PF17421.2 ORF82297 - 0.048 14.4 1.2 0.051 14.3 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Thioredoxin_7 PF13899.6 ORF82183 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like DUF3763 PF12592.8 ORF82151 - 0.32 11.1 0.2 0.32 11.1 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3763) Zip PF02535.22 ORF81631 - 0.082 12.1 0.7 0.091 12.0 0.7 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Carb_kinase PF01256.17 ORF81422 - 2.1e-09 37.2 0.1 2.3e-09 37.1 0.1 1.0 1 0 0 1 1 1 1 Carbohydrate kinase DUF5592 PF17332.2 ORF81287 - 3.2 8.4 10.7 6.2 7.4 10.7 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5592) zf-LYAR PF08790.11 ORF81205 - 0.0069 16.3 8.0 0.35 10.8 1.4 2.5 1 1 1 2 2 2 2 LYAR-type C2HC zinc finger Sirohm_synth_M PF14824.6 ORF80882 - 0.14 11.6 1.8 0.24 10.9 1.8 1.4 1 0 0 1 1 1 0 Sirohaem biosynthesis protein central Smg8_Smg9 PF10220.9 ORF80868 - 0.0089 14.4 0.3 0.0093 14.3 0.3 1.0 1 0 0 1 1 1 1 Smg8_Smg9 Cnd1 PF12717.7 ORF80764 - 0.00065 19.8 0.0 0.00073 19.6 0.0 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 ORF80764 - 0.056 13.7 0.0 0.098 13.0 0.0 1.4 1 1 0 1 1 1 0 HEAT repeat Homeodomain PF00046.29 ORF80755 - 1.1e-05 25.2 2.4 1.3e-05 24.9 2.4 1.1 1 0 0 1 1 1 1 Homeodomain DcpS PF05652.12 ORF80755 - 0.047 14.5 0.4 0.053 14.4 0.4 1.1 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme (DcpS) N-terminal zf_C2HC_14 PF18574.1 ORF8075 - 0.96 9.3 4.9 1.5 8.7 4.9 1.4 1 0 0 1 1 1 0 C2HC Zing finger domain LYTB PF02401.18 ORF80526 - 0.16 11.2 0.1 0.18 11.0 0.1 1.0 1 0 0 1 1 1 0 LytB protein NADHdh PF00146.21 ORF80172 - 0.00052 19.4 3.5 0.00052 19.4 3.5 1.1 1 0 0 1 1 1 1 NADH dehydrogenase COX2 PF00116.20 ORF80168 - 0.02 14.8 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain Thioredoxin_7 PF13899.6 ORF80083 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Rpp20 PF12328.8 ORF79990 - 0.16 11.9 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P adh_short PF00106.25 ORF7996 - 0.0044 16.5 0.1 0.0054 16.2 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Eno-Rase_NADH_b PF12242.8 ORF7996 - 0.02 14.7 0.1 0.024 14.4 0.1 1.1 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Molybdop_Fe4S4 PF04879.16 ORF79890 - 3.1e-05 23.9 1.1 3.1e-05 23.9 1.1 1.5 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain TAT_signal PF10518.9 ORF79890 - 4.2e-05 23.2 1.2 6.5e-05 22.6 1.2 1.3 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence CytB6-F_Fe-S PF08802.10 ORF79890 - 0.035 14.1 0.1 0.056 13.5 0.1 1.2 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit Thioredoxin_7 PF13899.6 ORF79824 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Zein-binding PF04576.15 ORF79774 - 0.049 13.9 0.2 0.049 13.9 0.2 1.2 1 0 0 1 1 1 0 Zein-binding DUF4846 PF16138.5 ORF79774 - 0.057 12.9 0.1 0.062 12.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (4846) Ribosomal_S17_N PF16205.5 ORF79463 - 0.14 12.5 0.1 0.23 11.9 0.1 1.3 1 0 0 1 1 1 0 Ribosomal_S17 N-terminal HTH_38 PF13936.6 ORF79423 - 0.22 11.3 1.9 2 8.2 0.1 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain NS3_envE PF02723.14 ORF79377 - 0.012 15.7 1.4 0.013 15.6 1.4 1.1 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E EF-hand_7 PF13499.6 ORF7928 - 0.012 16.0 0.0 0.014 15.8 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain pair Lipoprotein_17 PF04200.12 ORF7928 - 0.028 14.7 2.0 0.03 14.7 2.0 1.1 1 0 0 1 1 1 0 Lipoprotein associated domain DUF1082 PF06449.11 ORF7928 - 0.58 10.0 4.1 3.2 7.7 0.7 2.1 1 1 1 2 2 2 0 Mitochondrial domain of unknown function (DUF1082) FANCI_S3 PF14677.6 ORF79140 - 0.2 11.3 0.0 0.23 11.2 0.0 1.0 1 0 0 1 1 1 0 FANCI solenoid 3 COX2 PF00116.20 ORF78880 - 0.02 14.8 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain NADHdh PF00146.21 ORF78876 - 0.00052 19.4 3.5 0.00052 19.4 3.5 1.1 1 0 0 1 1 1 1 NADH dehydrogenase SSPI PF14098.6 ORF77688 - 0.051 13.7 0.2 0.08 13.1 0.2 1.3 1 0 0 1 1 1 0 Small, acid-soluble spore protein I MCD_N PF17408.2 ORF77688 - 0.12 12.5 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain FtsK_4TM PF13491.6 ORF77649 - 0.0042 16.8 0.1 0.0046 16.7 0.1 1.1 1 0 0 1 1 1 1 4TM region of DNA translocase FtsK/SpoIIIE Prok-RING_1 PF14446.6 ORF77268 - 0.0073 16.2 2.7 0.0091 15.9 2.7 1.4 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 Pro_isomerase PF00160.21 ORF77244 - 4.6e-20 72.5 0.0 4.9e-20 72.4 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ribosomal_L33 PF00471.20 ORF76939 - 3.4e-08 33.8 0.0 4.1e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L33 Endothelin PF00322.17 ORF76856 - 0.18 11.4 5.1 0.71 9.5 0.6 2.2 2 0 0 2 2 2 0 Endothelin family TPALS PF18178.1 ORF76616 - 0.021 14.3 0.0 0.021 14.3 0.0 1.0 1 0 0 1 1 1 0 TIR- and PNP-associating SLOG family Ank_2 PF12796.7 ORF75336 - 0.00052 20.6 0.0 0.00082 19.9 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF75336 - 0.0031 18.1 0.0 0.0039 17.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF75336 - 0.078 13.5 0.0 0.13 12.8 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeat Carb_kinase PF01256.17 ORF75051 - 2.1e-09 37.2 0.1 2.3e-09 37.1 0.1 1.0 1 0 0 1 1 1 1 Carbohydrate kinase Pkinase PF00069.25 ORF75045 - 1.2e-16 60.9 0.0 1.3e-16 60.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF75045 - 5e-05 22.7 0.0 5e-05 22.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF75045 - 0.03 13.7 0.0 0.034 13.5 0.0 1.0 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Clavanin PF05452.11 ORF75045 - 0.053 13.7 0.0 0.056 13.6 0.0 1.1 1 0 0 1 1 1 0 Clavanin Kinase-like PF14531.6 ORF75045 - 0.14 11.4 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Kinase-like GDWWSH PF15667.5 ORF74865 - 0.029 13.8 0.6 0.031 13.7 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function with motif GDWWSH Toxin_37 PF11415.8 ORF74604 - 0.073 12.9 6.2 0.11 12.4 6.2 1.3 1 0 0 1 1 1 0 Antifungal peptide termicin Death PF00531.22 ORF74538 - 0.023 14.8 0.1 1 9.6 0.0 2.0 1 1 1 2 2 2 0 Death domain SH3_4 PF06347.13 ORF74538 - 0.035 13.9 0.5 0.052 13.4 0.5 1.3 1 0 0 1 1 1 0 Bacterial SH3 domain Tht1 PF04163.12 ORF74131 - 0.15 10.8 0.2 0.16 10.7 0.2 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein HTH_38 PF13936.6 ORF74079 - 0.22 11.3 1.9 2 8.2 0.1 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain DUF3778 PF12620.8 ORF73855 - 0.11 12.1 0.1 0.14 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3778) DUF1126 PF06565.12 ORF73759 - 6.8e-18 64.4 0.1 7.2e-18 64.3 0.1 1.0 1 0 0 1 1 1 1 DUF1126 PH-like domain TSGP1 PF07771.11 ORF737 - 0.24 11.5 6.2 0.29 11.3 6.2 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 PEGSRP PF07623.11 ORF73571 - 0.071 12.9 2.1 0.13 12.1 2.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1584) COX1 PF00115.20 ORF73475 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF73475 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) LRR_6 PF13516.6 ORF72926 - 3.5e-05 23.5 0.9 0.00038 20.3 0.2 2.3 2 0 0 2 2 2 1 Leucine Rich repeat LRR_4 PF12799.7 ORF72926 - 0.058 13.8 1.1 0.15 12.5 1.3 1.7 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF72926 - 0.08 13.5 0.5 0.59 10.9 0.2 2.4 2 1 0 2 2 2 0 Leucine Rich Repeat ZZ PF00569.17 ORF72912 - 0.014 15.2 0.2 0.021 14.6 0.2 1.3 1 0 0 1 1 1 0 Zinc finger, ZZ type DUF2838 PF10998.8 ORF72912 - 0.077 13.2 4.2 0.083 13.1 4.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) Protoglobin PF11563.8 ORF72823 - 0.021 14.7 0.0 0.023 14.6 0.0 1.0 1 0 0 1 1 1 0 Protoglobin zf-UBP PF02148.19 ORF72528 - 0.00016 21.9 1.3 0.00017 21.8 1.3 1.2 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein RAG1 PF12940.7 ORF72200 - 0.093 10.8 0.1 0.089 10.9 0.1 1.0 1 0 0 1 1 1 0 Recombination-activation protein 1 (RAG1), recombinase DUF4256 PF14066.6 ORF71999 - 0.086 12.5 0.0 0.086 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) DUF2797 PF10977.8 ORF71956 - 0.11 12.3 0.2 0.12 12.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) TF_Otx PF03529.13 ORF71397 - 0.056 13.8 0.2 0.062 13.7 0.2 1.1 1 0 0 1 1 1 0 Otx1 transcription factor AHL_synthase PF17327.2 ORF70917 - 0.076 12.0 2.3 0.089 11.8 2.2 1.3 1 1 0 1 1 1 0 Acyl homoserine lactone synthase Abhydrolase_1 PF00561.20 ORF70524 - 0.032 13.9 0.1 0.032 13.9 0.1 1.0 1 0 0 1 1 1 0 alpha/beta hydrolase fold P21-Arc PF04062.14 ORF70243 - 1.3e-07 31.8 0.1 1.4e-07 31.7 0.1 1.0 1 0 0 1 1 1 1 ARP2/3 complex ARPC3 (21 kDa) subunit MNNL PF07657.13 ORF69353 - 0.049 13.7 5.9 0.057 13.5 5.9 1.1 1 0 0 1 1 1 0 N terminus of Notch ligand YL1_C PF08265.11 ORF6929 - 0.22 11.3 0.0 0.38 10.5 0.0 1.3 1 0 0 1 1 1 0 YL1 nuclear protein C-terminal domain RecR PF02132.15 ORF68914 - 0.047 13.2 0.1 0.065 12.8 0.1 1.2 1 0 0 1 1 1 0 RecR protein CCT PF06203.14 ORF67850 - 1.5e-07 31.3 9.9 2.2e-07 30.8 9.9 1.3 1 0 0 1 1 1 1 CCT motif CCT_2 PF09425.10 ORF67850 - 0.062 13.2 3.0 0.14 12.1 3.0 1.6 1 0 0 1 1 1 0 Divergent CCT motif AIMP2_LysRS_bd PF16780.5 ORF67509 - 0.00077 19.1 0.0 0.00093 18.9 0.0 1.2 1 0 0 1 1 1 1 AIMP2 lysyl-tRNA synthetase binding domain GvpG PF05120.12 ORF6717 - 0.0047 16.9 0.0 0.005 16.8 0.0 1.1 1 0 0 1 1 1 1 Gas vesicle protein G Thioredoxin_7 PF13899.6 ORF66441 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like UCH PF00443.29 ORF66160 - 1.5e-16 60.7 0.3 1.6e-16 60.6 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF66160 - 0.03 13.9 0.0 0.03 13.9 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase K_oxygenase PF13434.6 ORF66032 - 0.24 10.5 0.0 0.26 10.4 0.0 1.0 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) S1FA PF04689.13 ORF65865 - 5.2 7.3 6.1 8.3 6.6 6.1 1.4 1 1 0 1 1 1 0 DNA binding protein S1FA Homeodomain PF00046.29 ORF6584 - 0.049 13.5 0.2 0.049 13.5 0.2 1.5 2 0 0 2 2 2 0 Homeodomain DUF1640 PF07798.11 ORF65774 - 0.0023 18.0 3.8 0.0024 17.9 3.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) DUF2383 PF09537.10 ORF65774 - 0.0045 17.3 0.4 0.0049 17.2 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) FeoC PF09012.10 ORF65774 - 0.022 14.8 0.5 2.4 8.3 0.1 2.1 2 0 0 2 2 2 0 FeoC like transcriptional regulator HTH_WhiA PF02650.14 ORF65774 - 0.024 15.0 1.2 0.027 14.8 1.2 1.1 1 0 0 1 1 1 0 WhiA C-terminal HTH domain Prok-TraM PF09228.10 ORF65774 - 0.025 15.0 0.2 0.033 14.6 0.2 1.3 1 1 0 1 1 1 0 Prokaryotic Transcriptional repressor TraM KMP11 PF03037.16 ORF65774 - 0.43 11.4 7.7 0.87 10.4 5.9 1.9 1 1 1 2 2 2 0 Kinetoplastid membrane protein 11 DGF-1_5 PF11038.8 ORF65470 - 0.021 14.2 0.4 0.021 14.2 0.4 1.0 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 F-box-like PF12937.7 ORF65470 - 0.033 14.1 2.2 0.043 13.7 2.2 1.3 1 0 0 1 1 1 0 F-box-like DUF4232 PF14016.6 ORF65451 - 0.024 14.8 0.0 0.026 14.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4232) DUF4021 PF13213.6 ORF65450 - 0.057 13.4 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4021) Thioredoxin_7 PF13899.6 ORF65347 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like DUF2838 PF10998.8 ORF64962 - 0.24 11.7 4.5 0.26 11.5 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) DUF1992 PF09350.10 ORF64911 - 0.045 13.9 0.2 0.055 13.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1992) DUF4255 PF14065.6 ORF64730 - 0.024 14.3 0.0 0.024 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4255) wnt PF00110.19 ORF64571 - 0.026 14.1 0.8 0.028 14.0 0.8 1.0 1 0 0 1 1 1 0 wnt family SVWC PF15430.6 ORF64534 - 0.017 15.4 0.2 0.017 15.4 0.2 1.1 1 0 0 1 1 1 0 Single domain von Willebrand factor type C Helveticin_J PF17312.2 ORF64047 - 0.032 13.4 0.3 0.033 13.3 0.3 1.0 1 0 0 1 1 1 0 Bacteriocin helveticin-J Hex_IIIa PF02455.16 ORF64047 - 0.046 12.5 0.1 0.049 12.4 0.1 1.1 1 0 0 1 1 1 0 Hexon-associated protein (IIIa) Ribosomal_S15 PF00312.22 ORF64047 - 0.065 13.4 0.1 0.068 13.4 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein S15 DUF374 PF04028.13 ORF6387 - 0.021 14.4 0.0 0.023 14.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF374) DUF4637 PF15470.6 ORF63697 - 0.091 12.5 0.0 0.092 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) COX1 PF00115.20 ORF63595 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF63595 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) Homeodomain PF00046.29 ORF63053 - 1.1e-05 25.2 2.4 1.3e-05 24.9 2.4 1.1 1 0 0 1 1 1 1 Homeodomain DcpS PF05652.12 ORF63053 - 0.047 14.5 0.4 0.053 14.4 0.4 1.1 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme (DcpS) N-terminal DUF2336 PF10098.9 ORF63019 - 0.041 13.3 1.2 0.047 13.2 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2336) Jiraiya PF15038.6 ORF62955 - 0.047 13.1 0.1 0.05 13.0 0.1 1.0 1 0 0 1 1 1 0 Jiraiya YL1_C PF08265.11 ORF62166 - 0.22 11.3 0.0 0.38 10.5 0.0 1.3 1 0 0 1 1 1 0 YL1 nuclear protein C-terminal domain DAN PF03045.15 ORF61760 - 0.042 13.9 0.0 0.044 13.8 0.0 1.1 1 0 0 1 1 1 0 DAN domain SF3A3 PF16837.5 ORF61698 - 0.05 14.1 0.1 0.054 14.0 0.1 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 FliS PF02561.14 ORF61698 - 0.064 13.5 0.1 0.074 13.3 0.1 1.2 1 0 0 1 1 1 0 Flagellar protein FliS YodL PF14191.6 ORF61681 - 0.096 13.5 0.0 0.12 13.3 0.0 1.3 1 1 0 1 1 1 0 YodL-like FUSC PF04632.12 ORF61658 - 0.001 17.7 0.7 0.0011 17.6 0.7 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family Phosphoprotein PF00922.17 ORF61377 - 0.16 11.5 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein dDENN PF03455.19 ORF61348 - 0.0014 18.6 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 dDENN domain DUF1462 PF07315.11 ORF61112 - 0.053 13.8 0.0 0.058 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1462) YL1_C PF08265.11 ORF6086 - 0.22 11.3 0.0 0.38 10.5 0.0 1.3 1 0 0 1 1 1 0 YL1 nuclear protein C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks416.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks416.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks416.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks416.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:29:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF930 PF06059.12 ORF60615 - 0.094 13.3 0.2 0.11 13.1 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF930) zf-GRF PF06839.12 ORF59996 - 0.0033 17.5 2.7 0.0057 16.7 2.7 1.4 1 0 0 1 1 1 1 GRF zinc finger EMC3_TMCO1 PF01956.16 ORF59776 - 0.13 12.0 2.0 0.13 12.0 2.0 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Rhomboid_N PF12122.8 ORF59776 - 0.13 12.5 1.5 0.17 12.1 1.5 1.3 1 1 0 1 1 1 0 Cytoplasmic N-terminal domain of rhomboid serine protease SRTM1 PF15872.5 ORF59480 - 0.51 10.5 2.8 0.59 10.3 2.8 1.2 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 KASH PF10541.9 ORF59480 - 3.5 8.0 7.9 4.2 7.7 7.9 1.4 1 1 0 1 1 1 0 Nuclear envelope localisation domain FoP_duplication PF13865.6 ORF5943 - 0.46 11.1 11.7 0.5 10.9 11.7 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 BRCT_assoc PF12820.7 ORF58988 - 0.1 12.4 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Serine-rich domain associated with BRCT Tetradecapep PF08187.11 ORF58763 - 0.065 13.3 0.0 0.065 13.3 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family zf-C3HC4 PF00097.25 ORF58715 - 0.017 14.9 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF58715 - 0.019 14.8 0.1 0.026 14.4 0.1 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF58715 - 0.078 13.0 0.6 0.087 12.9 0.6 1.3 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_5 PF17121.5 ORF58715 - 0.15 12.0 0.1 0.15 12.0 0.1 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Protoglobin PF11563.8 ORF58477 - 0.021 14.7 0.0 0.023 14.6 0.0 1.0 1 0 0 1 1 1 0 Protoglobin ZapB PF06005.12 ORF58449 - 0.011 16.2 1.9 0.011 16.2 1.9 1.5 1 1 0 1 1 1 0 Cell division protein ZapB DUF3287 PF11690.8 ORF58449 - 0.012 15.3 1.4 0.015 15.0 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) DUF2951 PF11166.8 ORF58449 - 0.019 15.2 5.0 0.018 15.2 5.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) HALZ PF02183.18 ORF58449 - 0.026 14.8 9.6 0.058 13.6 0.8 2.7 2 1 1 3 3 3 0 Homeobox associated leucine zipper DUF410 PF04190.13 ORF58449 - 0.11 12.3 2.2 0.13 12.1 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF410) UPF0242 PF06785.11 ORF58449 - 0.32 11.1 5.8 0.31 11.1 5.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus SLATT_5 PF18160.1 ORF58449 - 2.9 7.2 9.1 3.6 6.9 9.1 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Lipoprotein_19 PF13617.6 ORF58403 - 5.1e-17 61.3 5.1 6.3e-17 61.1 5.1 1.1 1 0 0 1 1 1 1 YnbE-like lipoprotein DUF5346 PF17281.2 ORF58380 - 0.0087 16.1 1.5 0.0096 15.9 1.5 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5346) Humanin PF15040.6 ORF58266 - 0.046 13.1 0.2 0.074 12.5 0.2 1.3 1 0 0 1 1 1 0 Humanin family Hpre_diP_synt_I PF07456.11 ORF58212 - 0.0044 17.0 0.4 0.005 16.9 0.4 1.0 1 0 0 1 1 1 1 Heptaprenyl diphosphate synthase component I Aa_trans PF01490.18 ORF58212 - 0.13 11.0 0.4 0.12 11.0 0.4 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein MAP17 PF15807.5 ORF58095 - 0.24 11.6 0.4 0.26 11.5 0.4 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 NVEALA PF14055.6 ORF57803 - 0.026 14.5 0.0 0.039 13.9 0.0 1.3 1 0 0 1 1 1 0 NVEALA protein NDK PF00334.19 ORF57803 - 0.13 12.2 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Nucleoside diphosphate kinase Troponin-I_N PF11636.8 ORF57571 - 4.1 7.4 11.4 2.9 7.9 5.0 2.3 2 0 0 2 2 2 0 Troponin I residues 1-32 DUF4332 PF14229.6 ORF57285 - 0.013 15.7 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) CBM_X2 PF03442.14 ORF57242 - 0.028 14.5 0.1 0.033 14.3 0.1 1.2 1 0 0 1 1 1 0 Carbohydrate binding domain X2 COX1 PF00115.20 ORF572 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF572 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) Thioredoxin_7 PF13899.6 ORF56980 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Halogen_Hydrol PF10112.9 ORF56880 - 0.047 13.7 0.1 0.053 13.5 0.1 1.0 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PUB PF09409.10 ORF56759 - 0.095 12.6 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 PUB domain zn-ribbon_14 PF16503.5 ORF56736 - 0.078 12.5 0.7 0.13 11.8 0.7 1.3 1 0 0 1 1 1 0 Zinc-ribbon PMSI1 PF15322.6 ORF56549 - 0.01 15.3 0.4 0.012 15.1 0.4 1.0 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative Ank_5 PF13857.6 ORF56335 - 0.0007 19.9 0.0 0.0009 19.5 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF56335 - 0.04 14.5 0.0 0.054 14.1 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF56335 - 0.058 14.0 0.0 0.065 13.8 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Fibrillin_U_N PF18193.1 ORF56069 - 0.42 10.8 2.8 0.47 10.6 1.9 1.6 1 1 1 2 2 2 0 Fibrillin 1 unique N-terminal domain Deltameth_res PF16020.5 ORF55940 - 0.084 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Deltamethrin resistance COX1 PF00115.20 ORF54924 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF54924 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) MORN PF02493.20 ORF5464 - 7.5e-13 47.6 16.0 5.2e-06 26.0 2.9 3.1 3 0 0 3 3 3 3 MORN repeat Leu_leader PF08054.11 ORF54600 - 0.026 14.1 0.3 0.037 13.6 0.3 1.2 1 0 0 1 1 1 0 Leucine operon leader peptide SSXRD PF09514.10 ORF5447 - 0.054 13.1 0.4 0.11 12.1 0.4 1.4 1 0 0 1 1 1 0 SSXRD motif DUF2560 PF10834.8 ORF54394 - 0.092 13.0 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2560) XPB_DRD PF18458.1 ORF54387 - 0.092 12.6 0.3 0.14 12.1 0.3 1.2 1 0 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain vATP-synt_E PF01991.18 ORF54365 - 0.068 12.6 5.4 0.076 12.4 5.4 1.0 1 0 0 1 1 1 0 ATP synthase (E/31 kDa) subunit RTC PF01137.21 ORF54196 - 0.16 11.2 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 RNA 3'-terminal phosphate cyclase PT PF04886.12 ORF54147 - 0.0025 17.3 1.8 0.0033 16.9 1.8 1.1 1 0 0 1 1 1 1 PT repeat DUF3454 PF11936.8 ORF54123 - 0.043 14.2 1.2 0.048 14.1 1.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3454) Arm-DNA-bind_2 PF12167.8 ORF53869 - 0.069 13.1 0.3 0.15 12.0 0.3 1.7 1 1 0 1 1 1 0 Arm DNA-binding domain ZapB PF06005.12 ORF53370 - 0.003 18.0 1.6 0.0034 17.8 1.6 1.0 1 0 0 1 1 1 1 Cell division protein ZapB 3HCDH_N PF02737.18 ORF52811 - 8.4e-18 64.9 0.0 8.9e-18 64.8 0.0 1.0 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF4705 PF15788.5 ORF52764 - 0.26 11.6 2.4 0.41 10.9 2.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4705) MFS_1 PF07690.16 ORF52716 - 0.00023 20.2 7.3 0.00024 20.1 7.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF52716 - 0.0025 16.8 7.0 0.0026 16.7 7.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF4229 PF14012.6 ORF52716 - 0.12 12.4 1.1 0.12 12.4 1.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4229) La_HTH_kDCL PF18177.1 ORF52406 - 0.1 12.9 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 La HTH in kinetoplastid DICER domain Prefoldin_2 PF01920.20 ORF52334 - 9.5e-05 22.3 4.6 0.00011 22.1 4.6 1.1 1 0 0 1 1 1 1 Prefoldin subunit NADHdh PF00146.21 ORF51712 - 0.00052 19.4 3.5 0.00052 19.4 3.5 1.1 1 0 0 1 1 1 1 NADH dehydrogenase COX2 PF00116.20 ORF51708 - 0.02 14.8 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain Retrotran_gag_2 PF14223.6 ORF51438 - 0.0038 16.9 0.2 0.004 16.8 0.2 1.1 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type HARP PF07443.13 ORF51370 - 0.0012 18.4 0.2 0.0014 18.2 0.2 1.1 1 0 0 1 1 1 1 HepA-related protein (HARP) DUF4780 PF16012.5 ORF51370 - 0.084 12.3 0.1 0.084 12.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4780) Thioredoxin_7 PF13899.6 ORF51327 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like DUF3844 PF12955.7 ORF50844 - 0.018 15.1 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) TMEM95 PF15203.6 ORF50844 - 0.025 14.2 0.0 0.026 14.2 0.0 1.0 1 0 0 1 1 1 0 TMEM95 family EF-hand_1 PF00036.32 ORF50420 - 0.024 14.2 0.7 0.46 10.2 0.0 2.4 3 0 0 3 3 3 0 EF hand EF-hand_6 PF13405.6 ORF50420 - 0.074 13.0 0.0 3.6 7.8 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain Baculo_LEF5_C PF11792.8 ORF49829 - 0.11 12.2 2.3 3.7 7.3 0.1 2.2 1 1 1 2 2 2 0 Baculoviridae late expression factor 5 C-terminal domain DUF2458 PF10454.9 ORF49668 - 0.039 13.6 3.8 0.043 13.5 3.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2458) TMF_DNA_bd PF12329.8 ORF49668 - 0.086 12.9 6.4 0.1 12.6 6.4 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Desulfoferrod_N PF06397.12 ORF49664 - 0.1 12.2 0.2 6.4 6.5 0.1 2.1 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain SpoU_sub_bind PF08032.12 ORF49609 - 0.17 12.2 0.6 0.2 12.0 0.6 1.1 1 0 0 1 1 1 0 RNA 2'-O ribose methyltransferase substrate binding DUF3772 PF12607.8 ORF49432 - 0.0046 16.7 0.1 0.0062 16.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3772) GntP_permease PF02447.16 ORF48929 - 1.1e-23 83.6 1.7 1.2e-23 83.5 1.7 1.0 1 0 0 1 1 1 1 GntP family permease MCPVI PF02993.14 ORF48869 - 0.16 11.8 6.2 0.19 11.6 6.2 1.0 1 0 0 1 1 1 0 Minor capsid protein VI Thioredoxin_7 PF13899.6 ORF48812 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like SLATT_5 PF18160.1 ORF48711 - 0.015 14.7 0.5 0.016 14.5 0.5 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 SLATT_5 PF18160.1 ORF48641 - 1.2 8.5 3.5 1.2 8.4 3.5 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Amj PF10997.8 ORF4852 - 0.16 11.3 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Alternate to MurJ HECT PF00632.25 ORF47695 - 1.7e-17 63.8 0.0 1.9e-17 63.8 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Phage_ABA_S PF18066.1 ORF47627 - 0.09 13.5 0.0 0.09 13.5 0.0 1.1 1 0 0 1 1 1 0 Phage ABA sandwich domain Brr6_like_C_C PF10104.9 ORF47296 - 0.28 10.9 1.5 0.3 10.9 1.5 1.1 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain DUF3593 PF12159.8 ORF46809 - 0.19 11.8 4.7 0.23 11.5 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3593) Rota_NS53 PF00981.17 ORF46799 - 0.0016 17.4 1.4 0.0017 17.4 1.4 1.0 1 0 0 1 1 1 1 Rotavirus RNA-binding Protein 53 (NS53) Cu_amine_oxidN2 PF02727.16 ORF46697 - 0.061 13.6 0.1 0.1 12.9 0.1 1.3 1 0 0 1 1 1 0 Copper amine oxidase, N2 domain COX1 PF00115.20 ORF46351 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF46351 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF2633 PF11119.8 ORF46262 - 0.094 12.6 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Vps53_N PF04100.12 ORF46091 - 0.002 17.2 0.4 0.0021 17.1 0.4 1.0 1 0 0 1 1 1 1 Vps53-like, N-terminal SAYSvFN PF10260.9 ORF45564 - 0.23 11.4 2.5 0.35 10.8 2.1 1.6 1 1 0 1 1 1 0 Uncharacterized conserved domain (SAYSvFN) MatE PF01554.18 ORF4516 - 1.2e-07 31.6 0.7 1.2e-07 31.5 0.7 1.0 1 0 0 1 1 1 1 MatE Tetradecapep PF08187.11 ORF44050 - 0.065 13.3 0.0 0.065 13.3 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family Gag_p10 PF02337.17 ORF44038 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein rve_3 PF13683.6 ORF43887 - 2e-12 46.7 0.1 2.4e-12 46.5 0.1 1.1 1 0 0 1 1 1 1 Integrase core domain Pkinase PF00069.25 ORF4382 - 1.2e-16 60.9 0.0 1.3e-16 60.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4382 - 5e-05 22.7 0.0 5e-05 22.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF4382 - 0.03 13.7 0.0 0.034 13.5 0.0 1.0 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Clavanin PF05452.11 ORF4382 - 0.053 13.7 0.0 0.056 13.6 0.0 1.1 1 0 0 1 1 1 0 Clavanin Kinase-like PF14531.6 ORF4382 - 0.14 11.4 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Kinase-like Cpta_toxin PF07254.12 ORF43804 - 0.071 13.1 2.1 0.073 13.1 2.1 1.1 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system EbsA PF17255.2 ORF43804 - 0.39 11.0 5.2 0.47 10.8 5.2 1.1 1 0 0 1 1 1 0 EbsA-like protein DUF3080 PF11279.8 ORF43663 - 0.04 13.1 0.1 0.043 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3080) SpoVT_C PF15714.5 ORF43200 - 0.13 12.3 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 Stage V sporulation protein T C-terminal, transcription factor DUF3585 PF12130.8 ORF42964 - 0.023 14.8 0.2 0.023 14.8 0.2 1.0 1 0 0 1 1 1 0 Bivalent Mical/EHBP Rab binding domain Lectin_leg-like PF03388.13 ORF42717 - 0.061 12.6 0.0 0.07 12.5 0.0 1.0 1 0 0 1 1 1 0 Legume-like lectin family DUF3561 PF12084.8 ORF4269 - 0.056 13.5 0.4 0.065 13.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3561) Pannexin_like PF12534.8 ORF4269 - 0.15 11.1 3.1 0.17 10.9 3.1 1.0 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 BatA PF07584.11 ORF42470 - 0.23 11.9 4.6 2.3 8.7 4.6 1.9 1 1 0 1 1 1 0 Aerotolerance regulator N-terminal HTH_38 PF13936.6 ORF42438 - 0.22 11.3 1.9 2 8.2 0.1 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain PAD_N PF08526.10 ORF42305 - 0.078 13.4 0.0 0.08 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) N-terminal domain DUF3811 PF11656.8 ORF42018 - 0.045 14.2 1.9 0.05 14.0 1.9 1.1 1 0 0 1 1 1 0 YjbD family (DUF3811) Homeodomain PF00046.29 ORF41942 - 0.049 13.5 0.2 0.049 13.5 0.2 1.5 2 0 0 2 2 2 0 Homeodomain Cadherin_tail PF15974.5 ORF41700 - 0.15 12.4 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region EMC3_TMCO1 PF01956.16 ORF41602 - 0.13 12.0 2.0 0.13 12.0 2.0 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Rhomboid_N PF12122.8 ORF41602 - 0.13 12.5 1.5 0.17 12.1 1.5 1.3 1 1 0 1 1 1 0 Cytoplasmic N-terminal domain of rhomboid serine protease PhoU PF01895.19 ORF41316 - 0.042 14.3 0.4 0.76 10.3 0.1 1.9 1 1 1 2 2 2 0 PhoU domain DUF4515 PF14988.6 ORF41215 - 0.015 15.1 7.3 0.015 15.1 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4515) XhlA PF10779.9 ORF41215 - 0.14 12.4 1.3 0.2 11.9 1.3 1.3 1 0 0 1 1 1 0 Haemolysin XhlA NifW PF03206.14 ORF4120 - 0.021 15.3 0.0 0.023 15.2 0.0 1.1 1 0 0 1 1 1 0 Nitrogen fixation protein NifW Gag_p10 PF02337.17 ORF40660 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein Gag_p10 PF02337.17 ORF40637 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein MIX PF18529.1 ORF40380 - 0.31 10.7 1.9 0.32 10.7 1.9 1.1 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins Auxin_inducible PF02519.14 ORF40336 - 0.027 14.6 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 Auxin responsive protein XTBD PF11952.8 ORF39759 - 0.019 14.7 0.8 0.024 14.4 0.8 1.2 1 0 0 1 1 1 0 XRN-Two Binding Domain, XTBD Innexin PF00876.18 ORF39428 - 0.32 10.2 5.8 0.31 10.3 5.8 1.0 1 0 0 1 1 1 0 Innexin ATP-synt_C PF00137.21 ORF39133 - 4.7e-07 30.0 6.3 5.1e-07 29.9 6.3 1.1 1 0 0 1 1 1 1 ATP synthase subunit C TFIIB PF00382.19 ORF39091 - 0.051 13.6 0.2 0.074 13.1 0.2 1.3 1 0 0 1 1 1 0 Transcription factor TFIIB repeat Reprolysin PF01421.19 ORF38988 - 0.095 12.6 0.1 0.1 12.5 0.1 1.0 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease DUF3846 PF12957.7 ORF38836 - 0.042 14.2 0.0 0.042 14.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3846) MORN PF02493.20 ORF38634 - 2.1e-11 43.0 9.9 1.9e-07 30.6 0.7 3.1 3 0 0 3 3 3 3 MORN repeat DUF3048_C PF17479.2 ORF38634 - 0.035 14.5 1.1 0.11 12.9 1.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain DUF3956 PF13104.6 ORF38379 - 0.091 13.0 0.5 0.16 12.2 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3956) Ank_5 PF13857.6 ORF37836 - 0.0044 17.3 0.0 0.0068 16.7 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF37836 - 0.096 13.3 0.0 0.24 12.0 0.0 1.7 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Polo_box_2 PF18531.1 ORF37555 - 0.045 13.9 0.4 0.049 13.7 0.4 1.1 1 0 0 1 1 1 0 Polo box domain Kelch_1 PF01344.25 ORF37205 - 0.065 12.8 0.8 1.6 8.4 0.1 2.2 2 0 0 2 2 2 0 Kelch motif MIX PF18529.1 ORF36935 - 0.31 10.7 1.9 0.32 10.7 1.9 1.1 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins Ni_hydr_CYTB PF01292.20 ORF36794 - 0.002 17.8 5.9 0.002 17.8 5.9 1.3 2 0 0 2 2 2 1 Prokaryotic cytochrome b561 HemY_N PF07219.13 ORF36794 - 0.044 14.0 0.4 0.047 13.9 0.4 1.1 1 0 0 1 1 1 0 HemY protein N-terminus DUF3069 PF11269.8 ORF34839 - 0.043 14.1 1.6 0.046 14.0 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3069) Abhydrolase_7 PF12715.7 ORF34839 - 0.053 12.8 0.6 0.056 12.7 0.6 1.0 1 0 0 1 1 1 0 Abhydrolase family DUF1126 PF06565.12 ORF34797 - 0.1 12.4 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 DUF1126 PH-like domain B PF02216.16 ORF34797 - 0.17 11.9 1.8 1.3 9.0 0.6 2.4 1 1 1 2 2 2 0 B domain SR-25 PF10500.9 ORF34578 - 0.0065 16.1 12.7 0.0073 15.9 12.7 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein Chal_sti_synt_C PF02797.15 ORF34578 - 0.17 11.9 0.2 0.18 11.8 0.2 1.0 1 0 0 1 1 1 0 Chalcone and stilbene synthases, C-terminal domain LapA_dom PF06305.11 ORF34578 - 9.8 6.1 6.4 19 5.2 2.7 2.0 1 1 1 2 2 2 0 Lipopolysaccharide assembly protein A domain Gag_p10 PF02337.17 ORF34442 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein SSPI PF14098.6 ORF34310 - 0.051 13.7 0.2 0.08 13.1 0.2 1.3 1 0 0 1 1 1 0 Small, acid-soluble spore protein I MCD_N PF17408.2 ORF34310 - 0.12 12.5 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain PHD_4 PF16866.5 ORF34111 - 1.2 9.3 7.7 1.8 8.7 7.7 1.4 1 1 0 1 1 1 0 PHD-finger Pax2_C PF12403.8 ORF34074 - 0.028 14.5 0.0 0.033 14.3 0.0 1.0 1 0 0 1 1 1 0 Paired-box protein 2 C terminal PPTA PF01239.22 ORF34074 - 0.25 11.1 2.1 0.36 10.6 2.1 1.3 1 0 0 1 1 1 0 Protein prenyltransferase alpha subunit repeat ALG11_N PF15924.5 ORF33934 - 0.058 13.4 0.6 0.063 13.3 0.6 1.0 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus Aldo_ket_red PF00248.21 ORF33475 - 0.00034 19.9 0.1 0.00037 19.8 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family UPF0154 PF03672.13 ORF3309 - 0.02 14.9 0.5 0.029 14.4 0.5 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) WSS_VP PF12175.8 ORF3309 - 0.062 12.8 0.5 0.064 12.7 0.5 1.0 1 0 0 1 1 1 0 White spot syndrome virus structural envelope protein VP SUR7 PF06687.12 ORF32934 - 9.2 5.8 18.5 9.5 5.8 18.5 1.1 1 0 0 1 1 1 0 SUR7/PalI family Ank_5 PF13857.6 ORF32658 - 0.0044 17.3 0.0 0.0068 16.7 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF32658 - 0.096 13.3 0.0 0.24 12.0 0.0 1.7 1 1 1 2 2 2 0 Ankyrin repeats (many copies) S_2TMBeta PF18153.1 ORF32392 - 0.57 9.9 5.3 0.62 9.8 5.3 1.0 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain Auxin_inducible PF02519.14 ORF32178 - 0.027 14.6 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 Auxin responsive protein Prok-TraM PF09228.10 ORF32122 - 0.04 14.3 0.1 0.045 14.1 0.1 1.1 1 0 0 1 1 1 0 Prokaryotic Transcriptional repressor TraM Gemini_BL1 PF00845.19 ORF31398 - 0.057 13.0 0.1 0.057 13.0 0.1 1.0 1 0 0 1 1 1 0 Geminivirus BL1 movement protein Gag_p10 PF02337.17 ORF3092 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein RCC1_2 PF13540.6 ORF30318 - 0.079 12.8 0.3 0.11 12.3 0.3 1.2 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat IlvGEDA_leader PF08046.11 ORF30116 - 0.0048 16.3 2.2 0.007 15.8 2.2 1.3 1 0 0 1 1 1 1 IlvGEDA operon leader peptide IQ PF00612.27 ORF2953 - 5.3e-06 25.8 0.1 7.1e-06 25.4 0.1 1.2 1 0 0 1 1 1 1 IQ calmodulin-binding motif OGG_N PF07934.12 ORF29335 - 3.6e-12 46.4 0.1 4e-12 46.3 0.1 1.0 1 0 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain EF-hand_6 PF13405.6 ORF29303 - 0.01 15.7 0.3 0.038 13.9 0.2 2.2 1 1 0 1 1 1 1 EF-hand domain ER_lumen_recept PF00810.18 ORF29143 - 4.2e-06 27.7 0.8 4.2e-06 27.7 0.8 1.4 2 0 0 2 2 2 1 ER lumen protein retaining receptor DUF3155 PF11352.8 ORF29037 - 0.22 12.0 0.0 0.26 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3155) MORN PF02493.20 ORF289 - 1.1e-12 47.0 9.3 1.8e-06 27.5 0.3 3.4 4 0 0 4 4 4 2 MORN repeat RNaseH_pPIWI_RE PF13032.6 ORF28660 - 0.074 13.0 0.3 0.087 12.7 0.3 1.0 1 0 0 1 1 1 0 RNaseH domain of pPIWI_RE Pox_RNA_pol_35 PF03396.15 ORF28485 - 0.012 14.9 0.1 0.013 14.8 0.1 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 35 kD subunit Inhibitor_Mig-6 PF11555.8 ORF28345 - 0.81 9.8 7.7 0.18 11.9 3.3 1.8 1 1 1 2 2 2 0 EGFR receptor inhibitor Mig-6 zf-MYND PF01753.18 ORF28343 - 0.18 11.9 4.0 0.073 13.2 1.7 1.6 2 1 0 2 2 2 0 MYND finger dDENN PF03455.19 ORF27800 - 0.0014 18.6 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 dDENN domain DUF3784 PF12650.7 ORF27080 - 0.099 12.8 6.3 0.11 12.7 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) DUF4665 PF15679.5 ORF27044 - 0.052 14.2 3.9 0.066 13.8 3.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4665) DUF4710 PF15828.5 ORF27044 - 1.8 8.8 8.1 4.9 7.3 8.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4710) DFF40 PF09230.10 ORF26980 - 0.055 13.1 1.5 0.052 13.2 1.5 1.0 1 0 0 1 1 1 0 DNA fragmentation factor 40 kDa EntA_Immun PF08951.10 ORF26979 - 0.059 13.7 0.2 0.072 13.5 0.2 1.1 1 0 0 1 1 1 0 Enterocin A Immunity Thioredoxin_7 PF13899.6 ORF26939 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like LppC PF04348.13 ORF26867 - 0.22 10.3 0.1 0.23 10.2 0.1 1.0 1 0 0 1 1 1 0 LppC putative lipoprotein YL1_C PF08265.11 ORF26676 - 0.22 11.3 0.0 0.38 10.5 0.0 1.3 1 0 0 1 1 1 0 YL1 nuclear protein C-terminal domain Ank_4 PF13637.6 ORF26566 - 5.8e-14 52.3 0.2 5e-08 33.3 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF26566 - 1.8e-10 40.8 0.0 3.2e-08 33.6 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF26566 - 1.2e-09 38.6 0.1 1.1e-07 32.3 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF26566 - 1.2e-09 38.2 0.0 1.4e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF26566 - 3.7e-08 33.0 0.0 2.7e-06 27.3 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat DUF4322 PF14210.6 ORF26288 - 0.11 12.4 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) DUF2512 PF10710.9 ORF26136 - 0.033 13.9 3.3 0.037 13.7 3.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2512) RNA_pol_Rpb1_6 PF04992.14 ORF25827 - 0.045 13.6 0.0 0.052 13.4 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 6 TTL PF03133.15 ORF25465 - 7.5e-11 41.7 0.1 7.9e-11 41.6 0.1 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF25465 - 0.0059 15.9 0.0 0.0064 15.8 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp RST PF12174.8 ORF25465 - 0.019 14.8 0.0 0.024 14.6 0.0 1.1 1 0 0 1 1 1 0 RCD1-SRO-TAF4 (RST) plant domain Pkinase PF00069.25 ORF25175 - 9.9e-08 31.7 0.0 1e-07 31.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF25175 - 0.085 12.1 0.0 0.089 12.1 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase Helveticin_J PF17312.2 ORF2449 - 0.032 13.4 0.3 0.033 13.3 0.3 1.0 1 0 0 1 1 1 0 Bacteriocin helveticin-J Hex_IIIa PF02455.16 ORF2449 - 0.046 12.5 0.1 0.049 12.4 0.1 1.1 1 0 0 1 1 1 0 Hexon-associated protein (IIIa) Ribosomal_S15 PF00312.22 ORF2449 - 0.065 13.4 0.1 0.068 13.4 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein S15 Phage_G PF02306.15 ORF24467 - 0.1 12.3 0.5 0.11 12.2 0.5 1.1 1 0 0 1 1 1 0 Major spike protein (G protein) DUF4301 PF14134.6 ORF24433 - 0.053 12.3 0.0 0.057 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) Cas_Csn2 PF09711.10 ORF23388 - 0.062 12.9 4.3 0.068 12.8 4.3 1.0 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csn2) DUF4446 PF14584.6 ORF23388 - 0.51 10.3 6.1 0.53 10.2 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) cwf21 PF08312.12 ORF22162 - 0.13 12.4 2.2 8.7 6.6 0.0 2.2 1 1 1 2 2 2 0 cwf21 domain zf-primase PF09329.11 ORF21879 - 0.29 11.0 3.1 0.18 11.6 1.5 1.6 1 1 1 2 2 2 0 Primase zinc finger Gag_p10 PF02337.17 ORF21823 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein TPR_11 PF13414.6 ORF21450 - 5.7e-07 29.1 0.1 7.3e-07 28.8 0.1 1.2 1 0 0 1 1 1 1 TPR repeat TPR_1 PF00515.28 ORF21450 - 1.7e-06 27.6 0.2 3.1e-06 26.8 0.2 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF21450 - 7.1e-06 25.8 0.0 9.3e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF21450 - 0.00011 22.1 0.9 0.00018 21.4 0.3 1.7 2 1 0 2 2 2 1 Tetratricopeptide repeat TPM_phosphatase PF04536.14 ORF21450 - 0.045 13.9 0.1 0.056 13.6 0.1 1.1 1 0 0 1 1 1 0 TPM domain TPR_16 PF13432.6 ORF21450 - 0.05 14.2 0.0 0.054 14.1 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF21450 - 0.069 13.2 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF21450 - 0.075 13.4 0.0 0.68 10.5 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat zf-NF-X1 PF01422.17 ORF21220 - 0.16 12.1 0.9 0.16 12.1 0.9 1.4 2 0 0 2 2 2 0 NF-X1 type zinc finger Cytokin-bind PF09265.10 ORF21220 - 0.21 11.0 0.0 0.22 10.9 0.0 1.0 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding V-ATPase_H_N PF03224.14 ORF20985 - 0.086 12.1 0.0 0.086 12.1 0.0 1.0 1 0 0 1 1 1 0 V-ATPase subunit H Ycf9 PF01737.17 ORF20558 - 0.089 12.7 0.0 0.093 12.6 0.0 1.1 1 0 0 1 1 1 0 YCF9 Gag_p10 PF02337.17 ORF19955 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein ATXN-1_C PF12547.8 ORF19908 - 0.0031 17.8 0.1 0.004 17.4 0.1 1.1 1 0 0 1 1 1 1 Capicua transcriptional repressor modulator LSM PF01423.22 ORF19732 - 3.9e-16 58.5 0.5 4.3e-16 58.4 0.5 1.1 1 0 0 1 1 1 1 LSM domain DUF3674 PF12426.8 ORF19642 - 0.035 14.1 1.1 0.035 14.1 1.1 1.9 2 0 0 2 2 2 0 RNA dependent RNA polymerase PHB_acc PF05233.13 ORF19471 - 0.0094 16.0 0.7 0.018 15.0 0.7 1.5 1 0 0 1 1 1 1 PHB accumulation regulatory domain DUF840 PF05801.11 ORF18880 - 0.13 12.4 0.0 0.13 12.4 0.0 1.0 1 0 0 1 1 1 0 Lagovirus protein of unknown function (DUF840) Ribosomal_S17 PF00366.20 ORF18879 - 0.38 10.9 5.9 0.21 11.7 3.6 1.7 1 1 1 2 2 2 0 Ribosomal protein S17 DUF2207 PF09972.9 ORF18838 - 9.3 4.9 6.4 9.4 4.9 6.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) HTH_39 PF14090.6 ORF18814 - 0.055 13.2 0.1 0.093 12.5 0.0 1.4 2 0 0 2 2 2 0 Helix-turn-helix domain PNPase_C PF12111.8 ORF18534 - 0.12 11.9 0.9 0.2 11.1 0.9 1.4 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal CH_2 PF06294.11 ORF18407 - 0.0018 18.4 0.1 0.002 18.2 0.1 1.1 1 0 0 1 1 1 1 CH-like domain in sperm protein Big_11 PF18200.1 ORF18120 - 0.16 11.9 0.0 0.22 11.4 0.0 1.2 1 1 0 1 1 1 0 Bacterial Ig-like domain Glyco_trans_1_4 PF13692.6 ORF1807 - 0.15 12.5 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 HTH_38 PF13936.6 ORF17849 - 0.22 11.3 1.9 2 8.2 0.1 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain DUF2612 PF11041.8 ORF17757 - 0.03 14.2 0.0 0.032 14.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2612) COX1 PF00115.20 ORF1757 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF1757 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) GDWWSH PF15667.5 ORF17528 - 0.029 13.8 0.6 0.031 13.7 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function with motif GDWWSH DUF4519 PF15012.6 ORF17153 - 0.22 11.7 3.3 0.39 10.9 1.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4519) PEP-utilizers_C PF02896.18 ORF17121 - 6.7e-12 45.1 0.0 7.1e-12 45.0 0.0 1.0 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain DUF4705 PF15788.5 ORF17104 - 0.26 11.6 2.4 0.41 10.9 2.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4705) PTS_2-RNA PF01885.16 ORF16982 - 8.4e-05 22.7 0.1 9.8e-05 22.5 0.1 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family L_lactis_RepB_C PF06430.12 ORF16842 - 0.01 15.8 1.2 0.018 15.0 1.2 1.5 1 1 0 1 1 1 0 Lactococcus lactis RepB C-terminus Tetradecapep PF08187.11 ORF16624 - 0.065 13.3 0.0 0.065 13.3 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family PRK PF00485.18 ORF16614 - 0.024 14.4 0.1 0.024 14.4 0.1 1.0 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family LcnG-beta PF11632.8 ORF16586 - 0.0014 18.6 2.0 0.088 12.8 0.0 2.4 2 0 0 2 2 2 2 Lactococcin G-beta Prion_bPrPp PF11587.8 ORF16479 - 0.061 13.2 0.2 0.12 12.2 0.2 1.5 1 0 0 1 1 1 0 Major prion protein bPrPp - N terminal NOA36 PF06524.12 ORF16476 - 1.6 8.0 6.6 1.6 8.0 6.6 1.0 1 0 0 1 1 1 0 NOA36 protein Gag_p10 PF02337.17 ORF16369 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein Ras PF00071.22 ORF1502 - 0.005 16.5 0.1 0.0055 16.3 0.1 1.1 1 0 0 1 1 1 1 Ras family COX1 PF00115.20 ORF14906 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF14906 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF4900 PF16241.5 ORF14392 - 0.044 14.1 0.0 1 9.7 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4900) Peptidase_M27 PF01742.17 ORF1436 - 0.072 12.2 0.0 0.075 12.1 0.0 1.0 1 0 0 1 1 1 0 Clostridial neurotoxin zinc protease Zemlya PF17646.1 ORF14137 - 0.038 14.3 0.1 0.043 14.2 0.1 1.1 1 0 0 1 1 1 0 Closterovirus 1a polyprotein central region RPN13_C PF16550.5 ORF14137 - 0.081 13.1 0.0 0.086 13.0 0.0 1.1 1 0 0 1 1 1 0 UCH-binding domain HNH_3 PF13392.6 ORF141 - 0.077 12.8 0.0 0.096 12.5 0.0 1.1 1 0 0 1 1 1 0 HNH endonuclease Gag_p10 PF02337.17 ORF13861 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein DUF3736 PF12540.8 ORF13285 - 0.0051 16.9 0.1 0.0052 16.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3736) HTH_Mga PF08280.11 ORF1273 - 0.12 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Pet191_N PF10203.9 ORF12435 - 2.2e-11 43.9 1.2 2.4e-11 43.8 1.2 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein PET191 Prefoldin PF02996.17 ORF12361 - 8.2e-07 29.0 0.3 9.5e-07 28.8 0.3 1.0 1 0 0 1 1 1 1 Prefoldin subunit ASPRs PF17641.2 ORF12361 - 0.017 15.4 0.2 0.024 14.9 0.2 1.4 1 1 0 1 1 1 0 Ancylostoma-associated secreted protein related DDE_Tnp_1_2 PF13586.6 ORF12018 - 0.037 14.4 0.4 0.042 14.2 0.4 1.1 1 0 0 1 1 1 0 Transposase DDE domain Pkinase PF00069.25 ORF12004 - 5e-08 32.6 0.0 5.2e-08 32.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF12004 - 0.00052 19.4 0.0 0.00052 19.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase CysG_dimeriser PF10414.9 ORF11939 - 0.14 11.9 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region Tetradecapep PF08187.11 ORF11589 - 0.065 13.3 0.0 0.065 13.3 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family TMEMspv1-c74-12 PF11044.8 ORF112088 - 0.025 14.5 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Lectin_C_term PF18022.1 ORF111776 - 0.031 14.7 0.1 0.033 14.6 0.1 1.0 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin C-terminal domain TPR_2 PF07719.17 ORF111690 - 0.0062 16.6 1.4 0.0062 16.6 1.4 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF111690 - 0.0065 16.3 2.8 0.0065 16.3 2.8 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat Sec39 PF08314.11 ORF111690 - 0.13 10.6 0.1 0.14 10.6 0.1 1.0 1 0 0 1 1 1 0 Secretory pathway protein Sec39 dDENN PF03455.19 ORF111686 - 0.0014 18.6 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 dDENN domain PPDK_N PF01326.19 ORF111516 - 0.12 11.6 0.1 0.12 11.6 0.1 1.0 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DNA_RNApol_7kD PF03604.13 ORF111003 - 1.2e-14 53.7 6.2 1.5e-14 53.3 6.2 1.2 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit A2L_zn_ribbon PF08792.10 ORF111003 - 0.00031 20.4 1.6 0.00058 19.5 1.6 1.4 1 0 0 1 1 1 1 A2L zinc ribbon domain HypA PF01155.19 ORF111003 - 0.0027 17.7 0.2 0.0028 17.7 0.2 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_13 PF09855.9 ORF111003 - 0.006 16.7 2.1 0.035 14.3 0.2 2.1 1 1 1 2 2 2 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zinc_ribbon_10 PF10058.9 ORF111003 - 0.0077 15.9 0.2 0.081 12.7 0.0 2.1 2 0 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein NinF PF05810.12 ORF111003 - 0.011 15.6 0.2 0.012 15.4 0.2 1.2 1 0 0 1 1 1 0 NinF protein Zn-ribbon_8 PF09723.10 ORF111003 - 0.011 15.8 0.5 0.021 14.9 0.5 1.4 1 0 0 1 1 1 0 Zinc ribbon domain Tnp_zf-ribbon_2 PF13842.6 ORF111003 - 0.013 16.3 2.6 0.78 10.6 0.6 2.2 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-RING_7 PF02591.15 ORF111003 - 0.07 13.3 3.0 0.77 10.0 0.1 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain Rubredoxin_2 PF18073.1 ORF111003 - 0.12 12.1 3.7 3.1 7.6 0.4 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain DUF2752 PF10825.8 ORF110390 - 0.069 13.2 0.0 0.78 9.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) FAM24 PF15193.6 ORF110016 - 0.078 13.8 0.4 0.1 13.4 0.4 1.2 1 0 0 1 1 1 0 FAM24 family DUF2757 PF10955.8 ORF109935 - 0.019 15.2 0.0 0.026 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2757) Rpp20 PF12328.8 ORF109308 - 0.16 11.9 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P NADHdh PF00146.21 ORF108848 - 0.00052 19.4 3.5 0.00052 19.4 3.5 1.1 1 0 0 1 1 1 1 NADH dehydrogenase COX2 PF00116.20 ORF108844 - 0.02 14.8 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain Abhydrolase_1 PF00561.20 ORF108604 - 0.032 13.9 0.1 0.032 13.9 0.1 1.0 1 0 0 1 1 1 0 alpha/beta hydrolase fold Pox_F17 PF04767.12 ORF108575 - 0.14 12.7 1.4 0.17 12.4 1.4 1.4 1 1 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein DUF3981 PF13139.6 ORF108340 - 0.014 15.8 0.1 0.024 15.0 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3981) S1FA PF04689.13 ORF107955 - 5.2 7.3 6.1 8.3 6.6 6.1 1.4 1 1 0 1 1 1 0 DNA binding protein S1FA DUF3290 PF11694.8 ORF107817 - 0.038 14.0 1.0 0.038 14.0 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) Thioredoxin_7 PF13899.6 ORF107730 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like SLATT_5 PF18160.1 ORF107657 - 6 6.1 6.5 6.4 6.1 6.5 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Cortexin PF11057.8 ORF107508 - 0.031 14.1 0.0 0.035 13.9 0.0 1.2 1 0 0 1 1 1 0 Cortexin of kidney RecR PF02132.15 ORF106936 - 0.047 13.2 0.1 0.065 12.8 0.1 1.2 1 0 0 1 1 1 0 RecR protein DUF1295 PF06966.12 ORF106316 - 8.5e-11 41.8 0.0 8.5e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) UPF0370 PF13980.6 ORF106316 - 0.053 13.6 0.0 0.071 13.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0370) Prok-TraM PF09228.10 ORF105938 - 0.0067 16.8 1.2 0.011 16.1 1.2 1.4 1 1 0 1 1 1 1 Prokaryotic Transcriptional repressor TraM TIM21 PF08294.11 ORF105508 - 0.04 13.8 0.2 0.04 13.8 0.2 1.0 1 0 0 1 1 1 0 TIM21 Mso1_C PF14477.6 ORF105508 - 0.051 14.0 1.7 0.076 13.4 1.7 1.3 1 1 0 1 1 1 0 Membrane-polarising domain of Mso1 IMPa_helical PF18642.1 ORF105508 - 0.072 13.5 0.4 0.082 13.3 0.4 1.0 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain NUC173 PF08161.12 ORF10541 - 0.0029 17.3 0.1 0.0029 17.3 0.1 1.1 1 0 0 1 1 1 1 NUC173 domain LOB PF03195.14 ORF10541 - 0.035 14.7 0.1 0.042 14.4 0.1 1.1 1 0 0 1 1 1 0 Lateral organ boundaries (LOB) domain MerC PF03203.14 ORF10541 - 0.052 14.0 0.1 0.063 13.7 0.1 1.1 1 0 0 1 1 1 0 MerC mercury resistance protein DUF3704 PF12488.8 ORF105280 - 0.24 11.1 2.3 2.5 7.8 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3704) Cathelicidins PF00666.17 ORF105106 - 0.04 14.2 0.1 0.04 14.2 0.1 1.0 1 0 0 1 1 1 0 Cathelicidin SET_assoc PF11767.8 ORF104925 - 0.036 13.7 0.1 0.059 13.0 0.1 1.4 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated DUF4256 PF14066.6 ORF104793 - 0.086 12.5 0.0 0.086 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) Caleosin PF05042.13 ORF104045 - 0.13 12.2 0.0 0.15 12.0 0.0 1.0 1 0 0 1 1 1 0 Caleosin related protein NECFESHC PF16621.5 ORF103615 - 0.12 12.4 0.1 7.5 6.6 0.0 2.1 2 0 0 2 2 2 0 SH3 terminal domain of 2nd SH3 on Neutrophil cytosol factor 1 COX1 PF00115.20 ORF103145 - 1.4e-08 34.1 2.2 1.4e-08 34.0 2.2 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF3270 PF11674.8 ORF103145 - 0.1 12.8 0.7 0.14 12.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) PGBA_C PF15437.6 ORF103116 - 0.046 14.1 3.7 0.048 14.0 3.7 1.1 1 0 0 1 1 1 0 Plasminogen-binding protein pgbA C-terminal p450 PF00067.22 ORF103084 - 8.4e-05 21.5 0.0 8.5e-05 21.5 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 CTP_transf_1 PF01148.20 ORF103068 - 0.057 13.2 2.1 0.06 13.1 2.1 1.0 1 0 0 1 1 1 0 Cytidylyltransferase family DUF4870 PF09685.10 ORF103068 - 0.067 13.3 1.3 0.072 13.2 1.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4870) Trp_oprn_chp PF09534.10 ORF103068 - 0.069 12.9 7.2 0.074 12.8 7.2 1.0 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) ApbA_C PF08546.11 ORF10306 - 0.056 13.6 0.0 0.065 13.4 0.0 1.1 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA C terminal SinI PF08671.10 ORF103050 - 0.049 13.4 0.1 0.098 12.5 0.1 1.5 1 0 0 1 1 1 0 Anti-repressor SinI HTH_19 PF12844.7 ORF102845 - 0.072 13.1 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Gag_p10 PF02337.17 ORF102737 - 0.0061 16.5 0.1 0.0062 16.4 0.1 1.1 1 0 0 1 1 1 1 Retroviral GAG p10 protein Bystin PF05291.11 ORF10261 - 6e-16 58.6 0.2 6.5e-16 58.5 0.2 1.0 1 0 0 1 1 1 1 Bystin YL1_C PF08265.11 ORF102518 - 0.22 11.3 0.0 0.38 10.5 0.0 1.3 1 0 0 1 1 1 0 YL1 nuclear protein C-terminal domain CUB_2 PF02408.20 ORF10223 - 0.078 12.7 0.0 0.083 12.7 0.0 1.0 1 0 0 1 1 1 0 CUB-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks417.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks417.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks417.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks417.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Thioredoxin_7 PF13899.6 ORF102098 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like eIF-5a PF01287.20 ORF101972 - 0.014 15.4 1.0 0.017 15.2 1.0 1.2 1 0 0 1 1 1 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold AbiGii_2 PF16873.5 ORF10185 - 0.026 13.2 0.4 0.026 13.2 0.4 1.0 1 0 0 1 1 1 0 Putative abortive phage resistance protein AbiGii toxin Creatinase_N_2 PF16189.5 ORF101792 - 0.0062 16.6 0.1 0.0062 16.6 0.1 1.0 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain SSXRD PF09514.10 ORF10161 - 0.054 13.1 0.4 0.11 12.1 0.4 1.4 1 0 0 1 1 1 0 SSXRD motif Thioredoxin_7 PF13899.6 ORF101526 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like DUF5357 PF17310.2 ORF101346 - 0.16 10.5 0.0 0.16 10.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) Asp PF00026.23 ORF101293 - 3.6e-07 29.9 0.1 3.8e-07 29.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF101293 - 0.003 17.3 0.3 0.0038 17.0 0.3 1.2 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal zf-primase PF09329.11 ORF101148 - 0.29 11.0 3.1 0.18 11.6 1.5 1.6 1 1 1 2 2 2 0 Primase zinc finger PriA_C PF18074.1 ORF101019 - 0.078 13.8 0.0 0.088 13.6 0.0 1.1 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain DUF1391 PF07151.12 ORF100522 - 0.08 12.8 0.0 0.14 12.0 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1391) Glyco_transf_52 PF07922.11 ORF10044 - 0.028 13.7 0.5 0.03 13.6 0.5 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 52 Mito_carr PF00153.27 ORF10033 - 0.054 13.4 0.0 0.058 13.3 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial carrier protein Prefoldin_2 PF01920.20 ORF100008 - 9.5e-05 22.3 4.6 0.00011 22.1 4.6 1.1 1 0 0 1 1 1 1 Prefoldin subunit DUF4321 PF14209.6 NODE_90027_length_180_cov_0.827586_g82086_i0forward_frame_1 - 0.0071 16.2 1.6 0.0076 16.1 0.4 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4321) UDPG_MGDP_dh PF00984.19 NODE_90024_length_180_cov_0.827586_g82083_i0reverse_frame_1 - 0.0056 16.9 0.0 0.0059 16.8 0.0 1.0 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain Dak1 PF02733.17 NODE_90024_length_180_cov_0.827586_g82083_i0forward_frame_1 - 0.034 13.1 0.0 0.034 13.1 0.0 1.0 1 0 0 1 1 1 0 Dak1 domain PBP1_TM PF14812.6 NODE_90006_length_180_cov_0.965517_g82065_i0reverse_frame_1 - 0.12 12.8 0.6 0.18 12.2 0.4 1.4 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal PHD20L1_u1 PF16660.5 NODE_90004_length_180_cov_0.979310_g82063_i0forward_frame_1 - 0.061 14.1 0.0 0.066 14.0 0.0 1.1 1 0 0 1 1 1 0 PHD finger protein 20-like protein 1 GCV_T PF01571.21 NODE_90001_length_180_cov_0.986207_g82060_i0reverse_frame_1 - 4.1e-16 59.1 0.0 4.2e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain Phage_holin_4_2 PF04020.13 NODE_89989_length_180_cov_1.027586_g82048_i0forward_frame_1 - 0.0094 16.6 1.8 0.011 16.4 1.8 1.1 1 0 0 1 1 1 1 Mycobacterial 4 TMS phage holin, superfamily IV HD_5 PF13487.6 NODE_89952_length_180_cov_1.096552_g82011_i0reverse_frame_1 - 0.014 15.6 0.1 0.27 11.5 0.0 2.1 2 0 0 2 2 2 0 HD domain CD47 PF04549.14 NODE_89932_length_180_cov_1.096552_g81991_i0forward_frame_1 - 0.0092 16.2 5.0 0.0093 16.2 5.0 1.0 1 0 0 1 1 1 1 CD47 transmembrane region Pex24p PF06398.11 NODE_89932_length_180_cov_1.096552_g81991_i0forward_frame_1 - 1.7 7.5 3.8 1.8 7.5 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin ArsC PF03960.15 NODE_89925_length_180_cov_1.096552_g81984_i0forward_frame_1 - 0.054 13.5 0.1 0.073 13.1 0.1 1.2 1 0 0 1 1 1 0 ArsC family DUF2187 PF09953.9 NODE_89923_length_180_cov_1.096552_g81982_i0reverse_frame_1 - 0.063 13.3 0.1 0.074 13.0 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2187) PDR_CDR PF06422.12 NODE_89908_length_180_cov_1.103448_g81967_i0reverse_frame_1 - 0.57 10.1 5.8 0.67 9.9 5.8 1.2 1 0 0 1 1 1 0 CDR ABC transporter CHIPS PF11434.8 NODE_89898_length_180_cov_1.103448_g81957_i0reverse_frame_1 - 0.06 13.2 0.3 0.063 13.1 0.3 1.1 1 0 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS Vps36-NZF-N PF16988.5 NODE_89896_length_180_cov_1.103448_g81955_i0forward_frame_1 - 0.00044 19.6 0.2 0.00044 19.6 0.2 1.9 1 1 1 2 2 2 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-Sec23_Sec24 PF04810.15 NODE_89896_length_180_cov_1.103448_g81955_i0forward_frame_1 - 0.72 10.0 6.6 2.9 8.0 6.6 1.8 1 1 0 1 1 1 0 Sec23/Sec24 zinc finger Bunya_NS-S PF01104.17 NODE_89892_length_180_cov_1.103448_g81951_i0reverse_frame_1 - 0.052 13.4 0.0 0.058 13.2 0.0 1.1 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-s LPD26 PF18842.1 NODE_89842_length_180_cov_1.103448_g81901_i0forward_frame_1 - 0.043 13.8 0.1 0.057 13.4 0.1 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 26 DUF5519 PF17648.1 NODE_89835_length_180_cov_1.103448_g81894_i0reverse_frame_1 - 0.039 13.8 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5519) zf-CRD PF17979.1 NODE_89832_length_180_cov_1.103448_g81891_i0forward_frame_1 - 0.045 13.8 0.4 0.046 13.8 0.4 1.0 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions DUF1244 PF06844.11 NODE_89827_length_180_cov_1.103448_g81886_i0forward_frame_1 - 0.15 12.3 0.0 0.23 11.7 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1244) GH101_N PF17995.1 NODE_89795_length_180_cov_1.193103_g81854_i0reverse_frame_1 - 0.0087 15.7 0.0 0.0088 15.7 0.0 1.1 1 0 0 1 1 1 1 Endo-alpha-N-acetylgalactosaminidase N-terminal DUF2868 PF11067.8 NODE_89795_length_180_cov_1.193103_g81854_i0reverse_frame_1 - 0.13 11.7 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) Ion_trans PF00520.31 NODE_89789_length_180_cov_1.206897_g81848_i0forward_frame_1 - 0.083 12.1 0.3 0.078 12.2 0.3 1.0 1 0 0 1 1 1 0 Ion transport protein Peptidase_M91 PF14891.6 NODE_89787_length_180_cov_1.206897_g81846_i0reverse_frame_1 - 0.075 13.4 0.1 0.081 13.2 0.1 1.0 1 0 0 1 1 1 0 Effector protein DUF2556 PF10831.8 NODE_89787_length_180_cov_1.206897_g81846_i0forward_frame_1 - 0.18 11.8 2.4 0.24 11.3 2.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2556) DUF983 PF06170.12 NODE_89785_length_180_cov_1.213793_g81844_i0reverse_frame_1 - 0.023 15.1 0.2 0.03 14.7 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF983) Transpos_assoc PF13963.6 NODE_89785_length_180_cov_1.213793_g81844_i0forward_frame_1 - 0.07 13.4 3.2 0.087 13.1 3.2 1.2 1 0 0 1 1 1 0 Transposase-associated domain DUF957 PF06117.11 NODE_89782_length_180_cov_1.227586_g81841_i0reverse_frame_1 - 0.0082 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 Enterobacterial protein of unknown function (DUF957) NKWYS PF10364.9 NODE_89782_length_180_cov_1.227586_g81841_i0reverse_frame_1 - 0.058 13.5 0.1 0.06 13.5 0.1 1.1 1 0 0 1 1 1 0 Putative capsular polysaccharide synthesis protein ARID PF01388.21 NODE_89782_length_180_cov_1.227586_g81841_i0forward_frame_1 - 4.2e-05 24.1 0.0 4.5e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 ARID/BRIGHT DNA binding domain EI24 PF07264.11 NODE_89771_length_180_cov_1.262069_g81830_i0forward_frame_1 - 0.5 10.6 9.2 0.52 10.5 9.2 1.0 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) TMPIT PF07851.13 NODE_89771_length_180_cov_1.262069_g81830_i0forward_frame_1 - 0.75 9.0 4.7 0.81 8.9 4.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein Ac81 PF05820.11 NODE_89771_length_180_cov_1.262069_g81830_i0forward_frame_1 - 5.4 6.5 9.2 5.7 6.5 9.2 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 PilI PF10623.9 NODE_89769_length_180_cov_1.262069_g81828_i0forward_frame_1 - 0.099 12.8 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Plasmid conjugative transfer protein PilI TMEM43 PF07787.12 NODE_89767_length_180_cov_1.268966_g81826_i0reverse_frame_1 - 1.4 8.2 3.9 1.5 8.2 3.9 1.0 1 0 0 1 1 1 0 Transmembrane protein 43 Kelch_4 PF13418.6 NODE_89762_length_180_cov_1.268966_g81821_i0forward_frame_1 - 0.04 13.9 0.3 0.057 13.4 0.3 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain DB PF01682.19 NODE_89759_length_180_cov_1.275862_g81818_i0forward_frame_1 - 0.0074 16.6 0.4 0.0082 16.4 0.4 1.0 1 0 0 1 1 1 1 DB module Kelch_4 PF13418.6 NODE_89757_length_180_cov_1.275862_g81816_i0reverse_frame_1 - 0.056 13.4 0.5 2.8 8.0 0.4 2.2 2 0 0 2 2 2 0 Galactose oxidase, central domain EF-hand_7 PF13499.6 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.00036 20.9 0.9 0.00043 20.7 0.9 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.00053 19.3 1.0 0.00057 19.2 0.3 1.5 2 0 0 2 2 2 1 EF hand EF-hand_10 PF14788.6 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.0015 18.4 1.2 0.0019 18.0 0.3 1.6 1 1 1 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.0076 16.1 0.7 0.014 15.3 0.6 1.6 1 1 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.054 13.3 0.4 0.099 12.5 0.2 1.5 1 1 1 2 2 2 0 EF-hand domain pair JAKMIP_CC3 PF16034.5 NODE_89745_length_180_cov_1.317241_g81804_i0forward_frame_1 - 0.028 14.4 0.0 0.03 14.3 0.0 1.1 1 0 0 1 1 1 0 JAKMIP CC3 domain DUF1465 PF07323.12 NODE_89745_length_180_cov_1.317241_g81804_i0forward_frame_1 - 0.1 12.5 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) MerR-DNA-bind PF09278.11 NODE_89745_length_180_cov_1.317241_g81804_i0forward_frame_1 - 0.11 13.1 1.0 0.14 12.7 1.0 1.3 1 1 0 1 1 1 0 MerR, DNA binding Bunya_G2 PF03563.13 NODE_89742_length_180_cov_1.337931_g81801_i0forward_frame_1 - 0.18 11.0 0.3 0.18 11.1 0.3 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 PilI PF10623.9 NODE_89730_length_180_cov_1.365517_g81789_i0reverse_frame_1 - 0.032 14.4 0.0 0.039 14.1 0.0 1.1 1 0 0 1 1 1 0 Plasmid conjugative transfer protein PilI HTH_52 PF18576.1 NODE_89728_length_180_cov_1.365517_g81787_i0forward_frame_1 - 0.04 14.1 0.7 0.066 13.4 0.7 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain Thioredoxin_2 PF13098.6 NODE_89726_length_180_cov_1.372414_g81785_i0forward_frame_1 - 0.014 15.8 0.1 0.016 15.7 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Glutaredoxin PF00462.24 NODE_89724_length_180_cov_1.372414_g81783_i0forward_frame_1 - 1.3e-07 31.7 0.0 1.7e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF809 PF05663.11 NODE_89723_length_180_cov_1.372414_g81782_i0forward_frame_1 - 0.21 11.7 1.4 0.24 11.5 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Phage_RpbA PF10789.9 NODE_89721_length_180_cov_1.379310_g81780_i0forward_frame_1 - 0.055 13.5 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Phage RNA polymerase binding, RpbA G0-G1_switch_2 PF15103.6 NODE_89716_length_180_cov_1.379310_g81775_i0forward_frame_1 - 0.22 11.9 1.7 0.26 11.7 1.7 1.1 1 0 0 1 1 1 0 G0/G1 switch protein 2 Ac81 PF05820.11 NODE_89716_length_180_cov_1.379310_g81775_i0forward_frame_1 - 3.4 7.2 7.7 3.5 7.2 7.7 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 MMU163 PF17119.5 NODE_89706_length_180_cov_1.379310_g81765_i0reverse_frame_1 - 0.043 13.0 1.0 0.049 12.8 1.0 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis PT-VENN PF04829.13 NODE_89700_length_180_cov_1.386207_g81759_i0reverse_frame_1 - 9.7 6.4 7.6 13 5.9 7.1 1.7 1 1 0 1 1 1 0 Pre-toxin domain with VENN motif HTH_23 PF13384.6 NODE_89696_length_180_cov_1.420690_g81755_i0reverse_frame_1 - 0.013 15.3 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 Homeodomain-like domain eIF-5a PF01287.20 NODE_89693_length_180_cov_1.434483_g81752_i0reverse_frame_1 - 0.13 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold Pep1_7 PF17232.2 NODE_89686_length_180_cov_1.468966_g81745_i0reverse_frame_1 - 0.038 14.5 0.1 0.042 14.3 0.1 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 TPR_11 PF13414.6 NODE_89684_length_180_cov_1.482759_g81743_i0reverse_frame_1 - 0.092 12.4 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 TPR repeat ASPRs PF17641.2 NODE_89671_length_180_cov_1.565517_g81730_i0forward_frame_1 - 0.092 13.0 0.0 0.095 13.0 0.0 1.0 1 0 0 1 1 1 0 Ancylostoma-associated secreted protein related DUF3644 PF12358.8 NODE_89669_length_180_cov_1.572414_g81728_i0forward_frame_1 - 0.071 13.6 0.1 0.093 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3644) Peptidase_M1_N PF17900.1 NODE_89662_length_180_cov_1.606897_g81721_i0forward_frame_1 - 5.9e-09 36.4 0.0 6e-09 36.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TetR_C_2 PF08361.11 NODE_89656_length_180_cov_1.613793_g81715_i0forward_frame_1 - 0.052 13.6 0.1 0.052 13.6 0.1 1.0 1 0 0 1 1 1 0 MAATS-type transcriptional repressor, C-terminal region NuiA PF07924.11 NODE_89656_length_180_cov_1.613793_g81715_i0forward_frame_1 - 0.072 13.5 0.1 0.082 13.3 0.1 1.0 1 0 0 1 1 1 0 Nuclease A inhibitor-like protein Pyr_redox_2 PF07992.14 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 1.8e-10 40.6 0.1 1.8e-10 40.5 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 1.1e-07 32.3 0.6 1.8e-07 31.6 0.6 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 7.9e-05 22.1 0.0 7.9e-05 22.1 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 0.046 14.2 0.0 0.055 13.9 0.0 1.1 1 0 0 1 1 1 0 Putative NAD(P)-binding FMO-like PF00743.19 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 0.05 12.0 0.0 0.051 12.0 0.0 1.0 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Nairovirus_M PF07948.11 NODE_89643_length_180_cov_1.648276_g81702_i0reverse_frame_1 - 0.14 10.4 0.1 0.16 10.2 0.1 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like SR-25 PF10500.9 NODE_89643_length_180_cov_1.648276_g81702_i0forward_frame_1 - 6.3 6.3 12.4 6 6.4 12.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF1408 PF07193.11 NODE_89637_length_180_cov_1.648276_g81696_i0forward_frame_1 - 0.27 11.4 0.7 0.4 10.8 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1408) Med31 PF05669.12 NODE_89634_length_180_cov_1.648276_g81693_i0forward_frame_1 - 0.033 14.2 0.1 0.035 14.1 0.1 1.1 1 0 0 1 1 1 0 SOH1 Ank_2 PF12796.7 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 1.9e-07 31.6 0.0 2.5e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 4.4e-07 30.0 0.0 5.5e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 4.2e-06 26.9 0.1 6.1e-05 23.3 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 2.1e-05 24.5 0.0 0.0027 18.1 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 0.00082 19.9 0.0 0.0021 18.6 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (many copies) VWA_3_C PF18571.1 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 0.072 13.0 0.5 0.18 11.7 0.1 1.8 2 0 0 2 2 2 0 von Willebrand factor type A C-terminal domain YppF PF14178.6 NODE_89626_length_180_cov_1.655172_g81685_i0reverse_frame_1 - 0.14 12.1 0.3 0.19 11.7 0.3 1.2 1 0 0 1 1 1 0 YppF-like protein V_ATPase_I PF01496.19 NODE_89613_length_180_cov_1.668966_g81672_i0reverse_frame_1 - 2.9e-07 28.9 0.2 3e-07 28.8 0.2 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Ribosomal_S18 PF01084.20 NODE_89609_length_180_cov_1.682759_g81668_i0reverse_frame_1 - 1.3e-13 50.9 0.1 2e-13 50.3 0.1 1.3 1 1 0 1 1 1 1 Ribosomal protein S18 Spexin PF15171.6 NODE_89594_length_180_cov_1.751724_g81653_i0reverse_frame_1 - 0.18 12.0 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Neuropeptide secretory protein family, NPQ, spexin SelK_SelG PF10961.8 NODE_89594_length_180_cov_1.751724_g81653_i0forward_frame_1 - 0.1 13.2 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Selenoprotein SelK_SelG Mannitol_dh PF01232.23 NODE_89592_length_180_cov_1.765517_g81651_i0reverse_frame_1 - 1.9e-10 41.1 0.0 2e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain TMF_DNA_bd PF12329.8 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.00088 19.2 3.6 0.13 12.3 0.0 2.0 1 1 1 2 2 2 2 TATA element modulatory factor 1 DNA binding HAP1_N PF04849.13 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.0024 17.1 2.1 0.0027 17.0 2.1 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region TolA_bind_tri PF16331.5 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.014 15.5 1.0 0.016 15.2 1.0 1.1 1 0 0 1 1 1 0 TolA binding protein trimerisation SlyX PF04102.12 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.018 15.6 0.5 0.022 15.4 0.5 1.1 1 0 0 1 1 1 0 SlyX FlaC_arch PF05377.11 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.028 14.8 5.2 0.53 10.7 5.2 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Atg14 PF10186.9 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.072 12.2 2.7 0.079 12.0 2.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1664 PF07889.12 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.14 12.2 2.1 0.15 12.1 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Spem1 PF15670.5 NODE_89584_length_180_cov_1.841379_g81643_i0forward_frame_1 - 0.16 11.5 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 LepA_C PF06421.12 NODE_89582_length_180_cov_1.862069_g81641_i0forward_frame_1 - 1.5e-10 41.1 0.3 1.9e-10 40.9 0.3 1.1 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus HMG_box_2 PF09011.10 NODE_89576_length_180_cov_1.875862_g81635_i0reverse_frame_1 - 0.12 13.0 0.1 0.13 12.9 0.1 1.1 1 0 0 1 1 1 0 HMG-box domain Tom37 PF10568.9 NODE_89569_length_180_cov_1.917241_g81628_i0reverse_frame_1 - 0.032 14.5 0.2 0.036 14.4 0.2 1.0 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein Orthoreo_P17 PF07272.11 NODE_89561_length_180_cov_1.951724_g81620_i0forward_frame_1 - 0.15 12.1 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Orthoreovirus P17 protein Rtt106_N PF18215.1 NODE_89560_length_180_cov_1.958621_g81619_i0forward_frame_1 - 0.019 14.7 0.0 0.025 14.3 0.0 1.2 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain RRM_1 PF00076.22 NODE_89557_length_180_cov_1.993103_g81616_i0forward_frame_1 - 0.00075 19.3 0.0 0.00086 19.1 0.0 1.3 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pkinase PF00069.25 NODE_89553_length_180_cov_2.013793_g81612_i0reverse_frame_1 - 3.3e-14 52.9 0.2 3.6e-14 52.8 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_89553_length_180_cov_2.013793_g81612_i0reverse_frame_1 - 6.7e-08 32.1 0.0 7.2e-08 32.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_89553_length_180_cov_2.013793_g81612_i0reverse_frame_1 - 0.052 12.3 0.1 0.052 12.3 0.1 1.0 1 0 0 1 1 1 0 Fungal protein kinase SBP56 PF05694.11 NODE_89551_length_180_cov_2.020690_g81610_i0forward_frame_1 - 0.11 11.3 0.0 0.12 11.2 0.0 1.0 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) Peptidase_C30 PF05409.13 NODE_89538_length_180_cov_2.075862_g81597_i0reverse_frame_1 - 0.063 12.6 0.1 0.071 12.4 0.1 1.0 1 0 0 1 1 1 0 Coronavirus endopeptidase C30 GTPase_binding PF09027.10 NODE_89526_length_180_cov_2.151724_g81585_i0reverse_frame_1 - 0.1 12.6 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 GTPase binding ProSAAS PF07259.12 NODE_89520_length_180_cov_2.193103_g81579_i0forward_frame_1 - 0.017 15.1 0.4 0.017 15.1 0.4 1.1 1 0 0 1 1 1 0 ProSAAS precursor DUF2517 PF10725.9 NODE_89518_length_180_cov_2.200000_g81577_i0forward_frame_1 - 0.082 12.7 0.0 0.096 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2517) DUF1422 PF07226.11 NODE_89511_length_180_cov_2.220690_g81570_i0reverse_frame_1 - 0.075 13.1 1.3 0.098 12.7 0.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1422) TAtT PF16811.5 NODE_89509_length_180_cov_2.248276_g81568_i0reverse_frame_1 - 0.0077 15.6 1.6 0.0077 15.6 1.6 1.2 1 1 0 1 1 1 1 TRAP transporter T-component Suf PF05843.14 NODE_89509_length_180_cov_2.248276_g81568_i0reverse_frame_1 - 0.063 13.3 0.2 0.069 13.1 0.2 1.0 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) HAT PF02184.16 NODE_89509_length_180_cov_2.248276_g81568_i0reverse_frame_1 - 0.3 11.1 10.0 0.85 9.6 0.5 3.4 4 0 0 4 4 4 0 HAT (Half-A-TPR) repeat Pox_A32 PF04665.12 NODE_89502_length_180_cov_2.324138_g81561_i0reverse_frame_1 - 0.077 12.4 0.2 0.077 12.4 0.2 1.0 1 0 0 1 1 1 0 Poxvirus A32 protein YCF90 PF17088.5 NODE_89501_length_180_cov_2.344828_g81560_i0reverse_frame_1 - 0.024 14.0 0.1 0.025 13.9 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family NusG_II PF07009.11 NODE_89498_length_180_cov_2.379310_g81557_i0reverse_frame_1 - 0.15 12.3 0.1 0.16 12.2 0.1 1.0 1 0 0 1 1 1 0 NusG domain II zf-rbx1 PF12678.7 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 9.3e-06 25.8 1.3 1.2e-05 25.5 1.3 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.00077 19.2 0.7 0.00099 18.9 0.7 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.0018 18.6 2.6 0.0026 18.1 2.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.0024 17.9 0.4 0.0028 17.7 0.4 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.014 15.0 0.6 0.018 14.6 0.6 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.058 13.3 2.3 0.088 12.7 2.3 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF3050 PF11251.8 NODE_89492_length_180_cov_2.448276_g81551_i0reverse_frame_1 - 0.0036 17.0 0.1 0.0036 17.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3050) DUF3377 PF11857.8 NODE_89491_length_180_cov_2.448276_g81550_i0forward_frame_1 - 0.0068 16.3 0.6 0.0082 16.1 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3377) ExoD PF06055.12 NODE_89485_length_180_cov_2.531034_g81544_i0reverse_frame_1 - 0.078 12.4 0.1 0.083 12.3 0.1 1.0 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD DUF3797 PF12677.7 NODE_89485_length_180_cov_2.531034_g81544_i0forward_frame_1 - 0.074 13.0 0.6 0.11 12.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) TMEMspv1-c74-12 PF11044.8 NODE_89484_length_180_cov_2.544828_g81543_i0forward_frame_1 - 4.5 7.3 10.6 3.5 7.7 4.3 2.1 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF5405 PF17399.2 NODE_89473_length_180_cov_2.731034_g81532_i0reverse_frame_1 - 0.022 15.0 1.6 0.083 13.2 1.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5405) CSN5_C PF18323.1 NODE_89464_length_180_cov_2.958621_g81523_i0forward_frame_1 - 0.018 15.9 1.1 0.022 15.7 1.1 1.1 1 0 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain DUF4349 PF14257.6 NODE_89464_length_180_cov_2.958621_g81523_i0forward_frame_1 - 0.046 13.2 1.1 0.053 13.0 1.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) HupH_C PF04809.13 NODE_89461_length_180_cov_3.048276_g81520_i0reverse_frame_1 - 0.069 12.9 0.0 0.15 11.7 0.0 1.6 1 1 0 1 1 1 0 HupH hydrogenase expression protein, C-terminal conserved region PTS_IIA PF02255.16 NODE_89459_length_180_cov_3.262069_g81518_i0forward_frame_1 - 0.18 11.8 0.2 0.22 11.6 0.2 1.1 1 0 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIA subunit Spc24 PF08286.11 NODE_89456_length_180_cov_3.303448_g81515_i0forward_frame_1 - 0.083 13.1 0.2 0.097 12.9 0.2 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 AWS PF17907.1 NODE_89453_length_180_cov_3.503448_g81512_i0reverse_frame_1 - 0.052 13.6 0.2 0.074 13.1 0.2 1.3 1 0 0 1 1 1 0 AWS domain SBP_bac_11 PF13531.6 NODE_89451_length_180_cov_3.558621_g81510_i0reverse_frame_1 - 9.9e-05 22.2 0.0 0.0001 22.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF4379 PF14311.6 NODE_89450_length_180_cov_3.579310_g81509_i0forward_frame_1 - 0.2 12.1 5.7 0.64 10.4 5.7 1.8 1 1 0 1 1 1 0 Probable Zinc-ribbon domain Csm4_C PF17953.1 NODE_89422_length_180_cov_26.765517_g81481_i0forward_frame_1 - 0.046 13.6 0.2 0.055 13.3 0.2 1.2 1 0 0 1 1 1 0 CRISPR Csm4 C-terminal domain PRY PF13765.6 NODE_89422_length_180_cov_26.765517_g81481_i0forward_frame_1 - 0.29 10.8 2.4 1.3 8.7 0.2 2.1 1 1 1 2 2 2 0 SPRY-associated domain EKLF_TAD1 PF16832.5 NODE_89403_length_180_cov_33.986207_g81462_i0reverse_frame_1 - 0.028 14.3 0.1 0.043 13.7 0.1 1.3 1 0 0 1 1 1 0 Erythroid krueppel-like transcription factor, transactivation 1 TMEM192 PF14802.6 NODE_89400_length_180_cov_34.889655_g81459_i0reverse_frame_1 - 0.0078 15.3 0.2 0.008 15.3 0.2 1.0 1 0 0 1 1 1 1 TMEM192 family PH_17 PF18012.1 NODE_89395_length_180_cov_37.841379_g81454_i0reverse_frame_1 - 0.052 13.3 0.0 0.061 13.1 0.0 1.1 1 0 0 1 1 1 0 PH domain Arif-1 PF06770.11 NODE_89392_length_180_cov_38.806897_g81451_i0reverse_frame_1 - 0.87 9.2 6.9 0.84 9.3 6.9 1.1 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) AgrB PF04647.15 NODE_89390_length_180_cov_41.310345_g81449_i0reverse_frame_1 - 0.076 12.3 0.0 0.076 12.3 0.0 1.0 1 0 0 1 1 1 0 Accessory gene regulator B TTL PF03133.15 NODE_89388_length_180_cov_43.193103_g81447_i0reverse_frame_1 - 4.2e-18 65.5 0.7 4.6e-18 65.4 0.7 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Arm_vescicular PF18770.1 NODE_89383_length_180_cov_46.827586_g81442_i0reverse_frame_1 - 0.02 14.8 0.1 0.035 14.0 0.1 1.4 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor Doppel PF11466.8 NODE_89374_length_180_cov_58.379310_g81433_i0reverse_frame_1 - 0.11 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Prion-like protein Doppel IHABP4_N PF16174.5 NODE_89362_length_180_cov_67.358621_g81421_i0forward_frame_1 - 0.00033 21.3 0.1 0.0004 21.0 0.1 1.0 1 0 0 1 1 1 1 Intracellular hyaluronan-binding protein 4 N-terminal T2SSB PF16537.5 NODE_89358_length_180_cov_70.337931_g81417_i0forward_frame_1 - 0.18 11.4 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 Type II secretion system protein B CENP-I PF07778.11 NODE_89348_length_180_cov_99.427586_g81407_i0reverse_frame_1 - 0.11 11.1 0.3 0.13 10.9 0.3 1.0 1 0 0 1 1 1 0 Mis6 SDH_sah PF01972.16 NODE_89346_length_180_cov_103.834483_g81405_i0forward_frame_1 - 0.18 10.8 0.2 0.19 10.7 0.2 1.0 1 0 0 1 1 1 0 Serine dehydrogenase proteinase YlaH PF14036.6 NODE_89338_length_180_cov_160.724138_g81397_i0forward_frame_1 - 0.09 13.1 4.2 0.19 12.0 4.2 1.5 1 1 0 1 1 1 0 YlaH-like protein UvrB_inter PF17757.1 NODE_89338_length_180_cov_160.724138_g81397_i0forward_frame_1 - 0.1 12.8 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 UvrB interaction domain DUF1980 PF09323.10 NODE_89334_length_180_cov_909.179310_g81393_i0forward_frame_1 - 0.69 9.8 4.1 0.69 9.8 4.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) TMEM154 PF15102.6 NODE_89331_length_180_cov_132729.262069_g81390_i0reverse_frame_1 - 0.14 12.1 5.2 0.16 11.9 5.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family G3P_acyltransf PF02660.15 NODE_89331_length_180_cov_132729.262069_g81390_i0reverse_frame_1 - 0.21 11.6 8.5 0.23 11.5 8.5 1.0 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase Orai-1 PF07856.12 NODE_89331_length_180_cov_132729.262069_g81390_i0reverse_frame_1 - 6.4 6.4 10.3 7.4 6.2 10.3 1.1 1 0 0 1 1 1 0 Mediator of CRAC channel activity CENP-B_dimeris PF09026.10 NODE_89331_length_180_cov_132729.262069_g81390_i0forward_frame_1 - 0.054 13.9 4.8 0.062 13.7 4.8 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain PLAC PF08686.11 NODE_89322_length_181_cov_0.821918_g81381_i0forward_frame_2 - 0.11 13.3 4.4 0.45 11.3 0.9 2.3 2 0 0 2 2 2 0 PLAC (protease and lacunin) domain Tad PF13400.6 NODE_89319_length_181_cov_0.821918_g81378_i0forward_frame_2 - 0.21 11.9 3.1 0.29 11.5 3.1 1.2 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like MHC_II_beta PF00969.19 NODE_89309_length_181_cov_0.910959_g81368_i0reverse_frame_2 - 0.01 15.9 0.0 0.012 15.7 0.0 1.0 1 0 0 1 1 1 0 Class II histocompatibility antigen, beta domain DUF4516 PF14990.6 NODE_89309_length_181_cov_0.910959_g81368_i0forward_frame_3 - 0.047 13.4 0.0 0.078 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) OAM_dimer PF16554.5 NODE_89307_length_181_cov_0.924658_g81366_i0forward_frame_3 - 0.21 12.0 0.0 0.26 11.8 0.0 1.1 1 0 0 1 1 1 0 Dimerisation domain of d-ornithine 4,5-aminomutase Ion_trans PF00520.31 NODE_89299_length_181_cov_0.979452_g81358_i0forward_frame_2 - 0.016 14.4 0.5 0.016 14.4 0.5 1.0 1 0 0 1 1 1 0 Ion transport protein Ribosomal_TL5_C PF14693.6 NODE_89298_length_181_cov_0.986301_g81357_i0forward_frame_3 - 0.053 13.9 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein TL5, C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks418.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks418.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks418.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks418.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:24:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PulG PF11773.8 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_3 - 0.055 13.3 2.6 0.061 13.2 2.6 1.1 1 0 0 1 1 1 0 Type II secretory pathway pseudopilin EphA2_TM PF14575.6 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_3 - 0.1 13.5 0.1 0.11 13.4 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain YajC PF02699.15 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_3 - 1.1 9.2 4.7 1.3 8.9 4.7 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit Glycoprotein PF03409.15 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_2 - 2.4 6.9 16.6 2.5 6.9 16.6 1.0 1 0 0 1 1 1 0 Transmembrane glycoprotein NUDE_C PF04880.13 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_2 - 2.6 8.5 7.2 2.8 8.4 7.2 1.0 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region TMEM154 PF15102.6 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_2 - 2.7 7.9 8.2 3.6 7.5 8.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Pex24p PF06398.11 NODE_89286_length_181_cov_1.041096_g81345_i0forward_frame_2 - 0.082 11.9 1.3 0.091 11.7 1.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF4349 PF14257.6 NODE_89286_length_181_cov_1.041096_g81345_i0forward_frame_2 - 0.56 9.6 5.3 0.59 9.5 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Ac81 PF05820.11 NODE_89286_length_181_cov_1.041096_g81345_i0forward_frame_2 - 0.79 9.3 4.6 0.86 9.1 4.6 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 S_4TM PF18159.1 NODE_89286_length_181_cov_1.041096_g81345_i0forward_frame_2 - 1.2 8.4 5.5 1.3 8.2 5.5 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF3894 PF13033.6 NODE_89285_length_181_cov_1.047945_g81344_i0forward_frame_3 - 0.15 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3894) DUF2145 PF09916.9 NODE_89283_length_181_cov_1.047945_g81342_i0forward_frame_2 - 0.093 12.4 0.0 0.1 12.3 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2145) IlvGEDA_leader PF08046.11 NODE_89278_length_181_cov_1.061644_g81337_i0reverse_frame_3 - 0.022 14.2 0.4 0.029 13.8 0.4 1.2 1 0 0 1 1 1 0 IlvGEDA operon leader peptide APOBEC1 PF18769.1 NODE_89275_length_181_cov_1.068493_g81334_i0forward_frame_2 - 0.055 13.7 0.1 0.06 13.6 0.1 1.1 1 0 0 1 1 1 0 APOBEC1 TCL1_MTCP1 PF01840.17 NODE_89269_length_181_cov_1.075342_g81328_i0reverse_frame_2 - 0.16 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 TCL1/MTCP1 family Phage_Arf PF17585.2 NODE_89269_length_181_cov_1.075342_g81328_i0forward_frame_2 - 0.11 12.4 0.0 0.19 11.7 0.0 1.4 2 0 0 2 2 2 0 Accessory recombination function protein DUF2048 PF09752.9 NODE_89268_length_181_cov_1.075342_g81327_i0forward_frame_2 - 0.11 11.6 0.2 0.13 11.4 0.2 1.0 1 0 0 1 1 1 0 Abhydrolase domain containing 18 TMEM169 PF15052.6 NODE_89266_length_181_cov_1.082192_g81325_i0forward_frame_3 - 0.057 13.6 0.0 0.067 13.3 0.0 1.1 1 0 0 1 1 1 0 TMEM169 protein family Seipin PF06775.14 NODE_89265_length_181_cov_1.082192_g81324_i0reverse_frame_2 - 0.089 12.9 0.2 0.098 12.8 0.2 1.0 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) Tmemb_9 PF05434.11 NODE_89264_length_181_cov_1.082192_g81323_i0forward_frame_3 - 0.29 11.0 2.6 0.33 10.8 2.6 1.1 1 0 0 1 1 1 0 TMEM9 DUF3404 PF11884.8 NODE_89264_length_181_cov_1.082192_g81323_i0forward_frame_3 - 0.43 9.7 1.6 0.41 9.8 1.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) DUF1356 PF07092.12 NODE_89263_length_181_cov_1.082192_g81322_i0forward_frame_2 - 0.0013 18.1 0.2 0.0015 17.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1356) TgMIC1 PF11476.8 NODE_89262_length_181_cov_1.082192_g81321_i0forward_frame_3 - 0.099 12.4 0.0 0.099 12.4 0.0 1.1 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 DUF5484 PF17583.2 NODE_89260_length_181_cov_1.082192_g81319_i0reverse_frame_3 - 0.12 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5484) UspB PF10625.9 NODE_89258_length_181_cov_1.082192_g81317_i0forward_frame_3 - 0.12 12.4 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Universal stress protein B (UspB) CD225 PF04505.12 NODE_89253_length_181_cov_1.089041_g81312_i0forward_frame_3 - 0.061 13.5 0.4 0.061 13.5 0.4 1.6 1 1 1 2 2 2 0 Interferon-induced transmembrane protein GTP1_OBG PF01018.22 NODE_89249_length_181_cov_1.089041_g81308_i0reverse_frame_3 - 0.062 12.9 0.0 0.067 12.8 0.0 1.1 1 0 0 1 1 1 0 GTP1/OBG OKR_DC_1_N PF03709.15 NODE_89249_length_181_cov_1.089041_g81308_i0forward_frame_3 - 0.12 12.6 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain PROL5-SMR PF15621.6 NODE_89247_length_181_cov_1.089041_g81306_i0forward_frame_3 - 0.033 14.7 1.5 0.036 14.6 1.5 1.1 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family DUF5320 PF17253.2 NODE_89245_length_181_cov_1.089041_g81304_i0forward_frame_3 - 0.0075 17.3 0.2 0.0085 17.1 0.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5320) FoP_duplication PF13865.6 NODE_89245_length_181_cov_1.089041_g81304_i0forward_frame_3 - 0.05 14.2 3.2 0.055 14.0 3.2 1.1 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 ASPRs PF17641.2 NODE_89242_length_181_cov_1.089041_g81301_i0reverse_frame_3 - 0.14 12.4 0.0 0.15 12.4 0.0 1.0 1 0 0 1 1 1 0 Ancylostoma-associated secreted protein related Neisseria_TspB PF05616.13 NODE_89238_length_181_cov_1.089041_g81297_i0reverse_frame_3 - 0.97 7.8 7.1 0.91 7.9 7.1 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Herpes_UL52 PF03121.15 NODE_89236_length_181_cov_1.089041_g81295_i0forward_frame_2 - 0.089 12.7 0.4 0.11 12.5 0.4 1.1 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase NdhM PF10664.9 NODE_89232_length_181_cov_1.089041_g81291_i0reverse_frame_3 - 0.14 12.4 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Cyanobacterial and plastid NDH-1 subunit M WD40 PF00400.32 NODE_89224_length_181_cov_1.095890_g81283_i0forward_frame_2 - 4.3e-08 33.7 0.5 0.00036 21.3 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_89224_length_181_cov_1.095890_g81283_i0forward_frame_2 - 0.00026 21.2 0.1 0.00029 21.1 0.1 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 NODE_89224_length_181_cov_1.095890_g81283_i0forward_frame_2 - 0.00044 19.0 0.2 0.00044 19.0 0.2 1.0 1 0 0 1 1 1 1 Nucleoporin Nup120/160 DUF999 PF06198.11 NODE_89223_length_181_cov_1.095890_g81282_i0forward_frame_3 - 0.055 13.5 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF999) Peptidase_C33 PF05412.12 NODE_89219_length_181_cov_1.095890_g81278_i0reverse_frame_3 - 0.006 16.6 0.0 0.0064 16.5 0.0 1.1 1 0 0 1 1 1 1 Equine arterivirus Nsp2-type cysteine proteinase Adeno_PIX PF03955.14 NODE_89210_length_181_cov_1.095890_g81269_i0reverse_frame_2 - 0.011 15.9 1.5 0.012 15.8 1.5 1.1 1 0 0 1 1 1 0 Adenovirus hexon-associated protein (IX) Spt20 PF12090.8 NODE_89210_length_181_cov_1.095890_g81269_i0forward_frame_3 - 2.2 7.8 10.8 2.4 7.7 10.8 1.0 1 0 0 1 1 1 0 Spt20 family DUF4834 PF16118.5 NODE_89210_length_181_cov_1.095890_g81269_i0forward_frame_3 - 2.5 9.1 5.5 2.6 9.0 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Presenilin PF01080.17 NODE_89210_length_181_cov_1.095890_g81269_i0forward_frame_3 - 2.6 6.7 4.0 2.7 6.7 4.0 1.0 1 0 0 1 1 1 0 Presenilin RVT_1 PF00078.27 NODE_89196_length_181_cov_1.095890_g81255_i0forward_frame_3 - 0.059 12.9 0.0 0.082 12.4 0.0 1.2 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) MGC-24 PF05283.11 NODE_89195_length_181_cov_1.095890_g81254_i0reverse_frame_3 - 0.57 10.6 9.1 0.58 10.6 9.1 1.0 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF2054 PF10218.9 NODE_89193_length_181_cov_1.095890_g81252_i0reverse_frame_3 - 0.043 13.9 2.1 0.048 13.8 2.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) Peptidase_C32 PF05411.12 NODE_89185_length_181_cov_1.095890_g81244_i0reverse_frame_2 - 0.014 15.4 0.2 0.022 14.7 0.1 1.4 1 1 0 1 1 1 0 Equine arteritis virus putative proteinase PBP_like PF12727.7 NODE_89183_length_181_cov_1.095890_g81242_i0forward_frame_3 - 0.0021 17.2 0.0 0.0022 17.1 0.0 1.0 1 0 0 1 1 1 1 PBP superfamily domain PBP_like_2 PF12849.7 NODE_89183_length_181_cov_1.095890_g81242_i0forward_frame_3 - 0.034 13.8 0.0 0.038 13.7 0.0 1.0 1 0 0 1 1 1 0 PBP superfamily domain MFS_1 PF07690.16 NODE_89180_length_181_cov_1.095890_g81239_i0forward_frame_3 - 9.1e-07 28.1 0.1 1e-06 27.9 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily bacHORMA_2 PF18173.1 NODE_89172_length_181_cov_1.095890_g81231_i0reverse_frame_2 - 0.12 12.2 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Bacterial HORMA domain 2 TPP_enzyme_N PF02776.18 NODE_89172_length_181_cov_1.095890_g81231_i0forward_frame_2 - 0.088 12.4 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PC_rep PF01851.22 NODE_89169_length_181_cov_1.095890_g81228_i0forward_frame_3 - 0.0098 16.3 0.0 0.012 16.0 0.0 1.2 1 0 0 1 1 1 1 Proteasome/cyclosome repeat SSI PF00720.17 NODE_89169_length_181_cov_1.095890_g81228_i0forward_frame_3 - 0.1 12.6 0.2 0.12 12.4 0.2 1.1 1 0 0 1 1 1 0 Subtilisin inhibitor-like zf-UDP PF14569.6 NODE_89168_length_181_cov_1.095890_g81227_i0reverse_frame_2 - 0.028 14.5 1.6 0.031 14.4 1.6 1.2 1 0 0 1 1 1 0 Zinc-binding RING-finger Ion_trans PF00520.31 NODE_89162_length_181_cov_1.095890_g81221_i0reverse_frame_2 - 0.024 13.9 0.2 0.024 13.9 0.2 1.1 1 0 0 1 1 1 0 Ion transport protein Tubulin_C PF03953.17 NODE_89157_length_181_cov_1.095890_g81216_i0reverse_frame_2 - 0.085 13.0 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Tubulin C-terminal domain Hydrophobin_2 PF06766.11 NODE_89156_length_181_cov_1.095890_g81215_i0reverse_frame_2 - 0.032 14.2 0.4 0.041 13.8 0.4 1.1 1 0 0 1 1 1 0 Fungal hydrophobin zf-BED PF02892.15 NODE_89153_length_181_cov_1.095890_g81212_i0forward_frame_3 - 2.8 8.0 8.0 5.7 7.0 8.0 1.6 1 1 0 1 1 1 0 BED zinc finger Cation_ATPase_N PF00690.26 NODE_89151_length_181_cov_1.095890_g81210_i0forward_frame_2 - 0.075 12.7 0.2 0.12 12.1 0.2 1.3 1 0 0 1 1 1 0 Cation transporter/ATPase, N-terminus CysG_dimeriser PF10414.9 NODE_89151_length_181_cov_1.095890_g81210_i0forward_frame_2 - 0.099 12.4 0.5 0.14 11.9 0.5 1.2 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region DUF3079 PF11278.8 NODE_89147_length_181_cov_1.095890_g81206_i0forward_frame_2 - 0.23 11.3 2.2 2.3 8.1 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3079) PseudoU_synth_2 PF00849.22 NODE_89146_length_181_cov_1.095890_g81205_i0reverse_frame_2 - 0.0039 17.3 0.0 0.0046 17.1 0.0 1.0 1 0 0 1 1 1 1 RNA pseudouridylate synthase Cuticle_2 PF08184.11 NODE_89146_length_181_cov_1.095890_g81205_i0reverse_frame_2 - 0.026 14.5 0.1 0.033 14.2 0.1 1.2 1 0 0 1 1 1 0 Cuticle protein 7 isoform family IN_DBD_C PF00552.21 NODE_89143_length_181_cov_1.095890_g81202_i0forward_frame_2 - 0.081 12.2 0.1 0.12 11.7 0.1 1.3 1 0 0 1 1 1 0 Integrase DNA binding domain Dynamin_M PF01031.20 NODE_89137_length_181_cov_1.109589_g81196_i0reverse_frame_3 - 4.9e-07 29.2 0.0 5.3e-07 29.1 0.0 1.0 1 0 0 1 1 1 1 Dynamin central region CrgA PF06781.12 NODE_89133_length_181_cov_1.136986_g81192_i0reverse_frame_2 - 0.083 13.0 0.0 0.09 12.8 0.0 1.1 1 0 0 1 1 1 0 Cell division protein CrgA Med31 PF05669.12 NODE_89128_length_181_cov_1.150685_g81187_i0reverse_frame_2 - 0.085 12.9 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 SOH1 Nucleocap_ssRNA PF11128.8 NODE_89126_length_181_cov_1.157534_g81185_i0forward_frame_3 - 0.034 13.9 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 Plant viral coat protein nucleocapsid DUF4321 PF14209.6 NODE_89125_length_181_cov_1.164384_g81184_i0forward_frame_2 - 0.039 13.8 2.0 0.059 13.2 2.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4321) SNURF PF07192.11 NODE_89121_length_181_cov_1.178082_g81180_i0forward_frame_3 - 0.081 12.8 0.0 0.085 12.7 0.0 1.1 1 0 0 1 1 1 0 SNURF/RPN4 protein DUF5585 PF17823.1 NODE_89120_length_181_cov_1.184932_g81179_i0reverse_frame_3 - 0.026 13.5 0.1 0.026 13.5 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5585) RCR PF12273.8 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.026 15.2 0.6 0.029 15.0 0.6 1.1 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red SR-25 PF10500.9 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.042 13.5 3.7 0.042 13.4 3.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4834 PF16118.5 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.12 13.3 0.0 0.13 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.12 13.2 0.1 0.14 13.1 0.1 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF5129 PF17173.4 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.21 10.7 0.9 0.22 10.6 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) FeoB_associated PF12669.7 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 2 8.9 5.9 35 4.9 5.9 2.1 1 1 0 1 1 1 0 FeoB-associated Cys-rich membrane protein CDK2AP PF09806.9 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_2 - 0.09 12.8 1.0 0.091 12.8 1.0 1.0 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein DUF1409 PF07197.12 NODE_89112_length_181_cov_1.219178_g81171_i0forward_frame_2 - 0.016 15.1 2.5 0.46 10.4 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1409) Sensor PF13796.6 NODE_89110_length_181_cov_1.226027_g81169_i0reverse_frame_2 - 0.025 14.7 2.0 0.028 14.5 2.0 1.0 1 0 0 1 1 1 0 Putative sensor DUF963 PF06131.11 NODE_89102_length_181_cov_1.239726_g81161_i0reverse_frame_2 - 0.083 12.3 2.3 0.12 11.8 2.3 1.2 1 0 0 1 1 1 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) SAICAR_synt PF01259.18 NODE_89101_length_181_cov_1.246575_g81160_i0forward_frame_3 - 2.5e-11 43.7 0.0 2.6e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase DUF3390 PF11870.8 NODE_89100_length_181_cov_1.246575_g81159_i0reverse_frame_3 - 0.014 15.7 0.1 0.015 15.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) DarA_N PF18788.1 NODE_89100_length_181_cov_1.246575_g81159_i0reverse_frame_3 - 0.041 13.9 1.0 0.046 13.8 1.0 1.0 1 0 0 1 1 1 0 Defence against restriction A N-terminal DUF4710 PF15828.5 NODE_89100_length_181_cov_1.246575_g81159_i0reverse_frame_2 - 0.025 14.7 0.1 0.028 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) UPF0640 PF15114.6 NODE_89100_length_181_cov_1.246575_g81159_i0forward_frame_2 - 0.025 14.4 2.2 0.037 13.8 2.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0640 BING4CT PF08149.11 NODE_89097_length_181_cov_1.246575_g81156_i0forward_frame_2 - 8.8e-25 86.3 0.0 9.4e-25 86.2 0.0 1.0 1 0 0 1 1 1 1 BING4CT (NUC141) domain Aminotran_1_2 PF00155.21 NODE_89095_length_181_cov_1.267123_g81154_i0reverse_frame_3 - 0.0096 15.1 0.0 0.011 15.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Atrophin-1 PF03154.15 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_3 - 6.4 4.9 9.6 6.1 5.0 9.6 1.0 1 0 0 1 1 1 0 Atrophin-1 family Atrophin-1 PF03154.15 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_2 - 0.14 10.5 2.5 0.12 10.7 2.5 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_2 - 0.24 11.4 1.5 0.24 11.4 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) IPPT PF01715.17 NODE_89086_length_181_cov_1.280822_g81145_i0forward_frame_2 - 2e-17 63.8 0.0 2e-17 63.8 0.0 1.0 1 0 0 1 1 1 1 IPP transferase DUF1033 PF06279.11 NODE_89073_length_181_cov_1.328767_g81132_i0forward_frame_3 - 0.011 15.8 0.1 0.011 15.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1033) HOK_GEF PF01848.16 NODE_89073_length_181_cov_1.328767_g81132_i0forward_frame_2 - 0.083 12.3 0.0 1 8.8 0.0 2.0 2 0 0 2 2 2 0 Hok/gef family cNMPbd_u2 PF16643.5 NODE_89069_length_181_cov_1.349315_g81128_i0forward_frame_2 - 0.049 14.1 0.0 0.049 14.1 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on cNMP-binding protein Transformer PF06495.11 NODE_89068_length_181_cov_1.349315_g81127_i0reverse_frame_2 - 2.7 8.0 17.9 2.9 8.0 17.9 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein DUF2207 PF09972.9 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_2 - 0.93 8.2 4.1 0.95 8.2 4.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Pex24p PF06398.11 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_2 - 9.9 5.0 7.4 11 4.9 7.4 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF5095 PF17016.5 NODE_89065_length_181_cov_1.349315_g81124_i0forward_frame_3 - 0.016 14.9 0.7 0.016 14.9 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5095) Sld5 PF05916.11 NODE_89063_length_181_cov_1.349315_g81122_i0forward_frame_2 - 0.015 15.8 0.0 0.017 15.6 0.0 1.0 1 0 0 1 1 1 0 GINS complex protein KOW PF00467.29 NODE_89059_length_181_cov_1.363014_g81118_i0reverse_frame_3 - 0.00041 20.2 0.1 0.00053 19.8 0.1 1.2 1 0 0 1 1 1 1 KOW motif MTHFR PF02219.17 NODE_89057_length_181_cov_1.363014_g81116_i0forward_frame_2 - 0.0054 16.1 0.0 0.006 15.9 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase DUF4306 PF14154.6 NODE_89055_length_181_cov_1.363014_g81114_i0forward_frame_3 - 0.03 14.5 0.2 0.034 14.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4306) DUF2680 PF10925.8 NODE_89052_length_181_cov_1.369863_g81111_i0forward_frame_3 - 0.028 14.4 1.9 0.81 9.7 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) Cullin_binding PF03556.15 NODE_89052_length_181_cov_1.369863_g81111_i0forward_frame_3 - 0.051 14.0 0.1 0.056 13.9 0.1 1.2 1 0 0 1 1 1 0 Cullin binding Ribosomal_L29 PF00831.23 NODE_89052_length_181_cov_1.369863_g81111_i0forward_frame_3 - 0.098 12.6 0.1 1.4 8.9 0.0 2.0 2 0 0 2 2 2 0 Ribosomal L29 protein FTCD_C PF04961.12 NODE_89052_length_181_cov_1.369863_g81111_i0forward_frame_3 - 0.12 12.1 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase Sh_2 PF17512.2 NODE_89042_length_181_cov_1.369863_g81101_i0forward_frame_3 - 0.14 11.9 1.3 0.15 11.8 1.3 1.1 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein Pkinase PF00069.25 NODE_89040_length_181_cov_1.369863_g81099_i0reverse_frame_3 - 0.081 12.3 0.0 0.081 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Pkinase PF00069.25 NODE_89040_length_181_cov_1.369863_g81099_i0reverse_frame_2 - 2.8e-07 30.2 0.5 2.8e-07 30.2 0.5 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_89040_length_181_cov_1.369863_g81099_i0reverse_frame_2 - 0.0021 17.4 0.0 0.0021 17.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase HapK PF11639.8 NODE_89037_length_181_cov_1.390411_g81096_i0reverse_frame_2 - 0.14 12.6 0.0 0.14 12.6 0.0 1.1 1 0 0 1 1 1 0 REDY-like protein HapK Fer4_23 PF18009.1 NODE_89036_length_181_cov_1.390411_g81095_i0reverse_frame_2 - 0.0045 17.4 0.0 0.0056 17.1 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S iron-sulfur cluster binding domain TAF8_C PF10406.9 NODE_89033_length_181_cov_1.404110_g81092_i0forward_frame_3 - 0.022 15.3 0.2 0.031 14.9 0.2 1.3 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term DUF3452 PF11934.8 NODE_89031_length_181_cov_1.404110_g81090_i0reverse_frame_2 - 0.071 12.7 0.0 0.072 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) Toxin_38 PF14866.6 NODE_89024_length_181_cov_1.424658_g81083_i0forward_frame_2 - 0.0073 16.6 0.0 0.0089 16.3 0.0 1.1 1 0 0 1 1 1 1 Potassium channel toxin Ion_trans PF00520.31 NODE_89018_length_181_cov_1.472603_g81077_i0forward_frame_2 - 3.5e-10 39.5 0.4 3.7e-10 39.4 0.4 1.0 1 0 0 1 1 1 1 Ion transport protein ACDC PF14733.6 NODE_89017_length_181_cov_1.472603_g81076_i0reverse_frame_3 - 0.034 14.4 0.5 0.041 14.2 0.5 1.1 1 0 0 1 1 1 0 AP2-coincident C-terminal NDUF_B5 PF09781.9 NODE_89008_length_181_cov_1.513699_g81067_i0forward_frame_2 - 0.13 11.8 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit DUF612 PF04747.12 NODE_88997_length_181_cov_1.547945_g81056_i0forward_frame_3 - 0.0058 15.8 1.3 0.0058 15.8 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF612 Yos1 PF08571.10 NODE_88994_length_181_cov_1.554795_g81053_i0reverse_frame_2 - 0.065 13.5 0.0 0.087 13.1 0.0 1.2 1 0 0 1 1 1 0 Yos1-like WSK PF03832.13 NODE_88989_length_181_cov_1.575342_g81048_i0reverse_frame_3 - 0.053 13.2 1.2 0.55 10.0 0.3 2.2 2 0 0 2 2 2 0 WSK motif zf-FCS PF06467.14 NODE_88988_length_181_cov_1.575342_g81047_i0reverse_frame_3 - 0.0025 17.7 1.3 0.0048 16.8 1.3 1.5 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif TMEM214 PF10151.9 NODE_88987_length_181_cov_1.575342_g81046_i0reverse_frame_3 - 5.7 5.3 7.3 6 5.2 7.3 1.0 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator Protamine_like PF06382.11 NODE_88982_length_181_cov_1.609589_g81041_i0reverse_frame_3 - 0.04 14.1 0.0 0.042 14.0 0.0 1.0 1 0 0 1 1 1 0 Protamine and protamine like Mt_ATP-synt_B PF05405.14 NODE_88981_length_181_cov_1.609589_g81040_i0reverse_frame_2 - 0.1 12.2 0.0 0.12 11.9 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) KAAG1 PF15354.6 NODE_88977_length_181_cov_1.623288_g81036_i0reverse_frame_2 - 0.026 15.1 0.0 0.028 15.0 0.0 1.1 1 0 0 1 1 1 0 Kidney-associated antigen 1 FERM_M PF00373.18 NODE_88976_length_181_cov_1.623288_g81035_i0forward_frame_3 - 0.12 12.8 0.3 0.13 12.7 0.3 1.0 1 0 0 1 1 1 0 FERM central domain Mrr_N PF14338.6 NODE_88976_length_181_cov_1.623288_g81035_i0forward_frame_2 - 0.024 14.8 0.0 0.024 14.8 0.0 1.0 1 0 0 1 1 1 0 Mrr N-terminal domain Bee_toxin PF17454.2 NODE_88975_length_181_cov_1.623288_g81034_i0reverse_frame_2 - 0.013 15.5 0.4 0.016 15.2 0.4 1.3 1 0 0 1 1 1 0 Honey bee toxin SopE_GEF PF07487.13 NODE_88967_length_181_cov_1.630137_g81026_i0reverse_frame_2 - 0.059 13.5 0.0 0.064 13.4 0.0 1.0 1 0 0 1 1 1 0 SopE GEF domain T2SS-T3SS_pil_N PF13629.6 NODE_88966_length_181_cov_1.630137_g81025_i0reverse_frame_3 - 0.085 12.6 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Pilus formation protein N terminal region DUF4131 PF13567.6 NODE_88963_length_181_cov_1.636986_g81022_i0forward_frame_2 - 0.067 12.8 0.4 0.067 12.8 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) GSIII_N PF12437.8 NODE_88961_length_181_cov_1.636986_g81020_i0reverse_frame_3 - 0.089 12.5 0.3 0.092 12.4 0.3 1.0 1 0 0 1 1 1 0 Glutamine synthetase type III N terminal zf-Tim10_DDP PF02953.15 NODE_88952_length_181_cov_1.636986_g81011_i0reverse_frame_3 - 0.0041 16.8 3.6 0.0048 16.5 3.6 1.3 1 1 0 1 1 1 1 Tim10/DDP family zinc finger DUF543 PF04418.12 NODE_88952_length_181_cov_1.636986_g81011_i0forward_frame_3 - 0.17 11.9 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF543) DUF2680 PF10925.8 NODE_88947_length_181_cov_1.643836_g81006_i0reverse_frame_2 - 0.048 13.7 0.0 0.059 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2680) Opiods_neuropep PF01160.18 NODE_88942_length_181_cov_1.643836_g81001_i0reverse_frame_3 - 0.0017 18.4 0.1 0.0025 17.9 0.1 1.2 1 0 0 1 1 1 1 Vertebrate endogenous opioids neuropeptide Thioredoxin PF00085.20 NODE_88942_length_181_cov_1.643836_g81001_i0reverse_frame_3 - 0.1 12.6 0.3 0.11 12.5 0.3 1.1 1 0 0 1 1 1 0 Thioredoxin CysA_C_terminal PF17850.1 NODE_88940_length_181_cov_1.643836_g80999_i0reverse_frame_3 - 0.12 12.9 1.9 0.12 12.9 1.9 1.8 2 0 0 2 2 2 0 CysA C-terminal regulatory domain Misat_Tub_SegII PF10644.9 NODE_88939_length_181_cov_1.643836_g80998_i0reverse_frame_2 - 0.088 13.1 0.1 0.088 13.1 0.1 1.1 1 0 0 1 1 1 0 Misato Segment II tubulin-like domain ASFV_J13L PF05568.11 NODE_88939_length_181_cov_1.643836_g80998_i0forward_frame_2 - 0.11 12.2 2.3 0.13 12.0 2.3 1.0 1 0 0 1 1 1 0 African swine fever virus J13L protein zf-RING_10 PF16685.5 NODE_88937_length_181_cov_1.643836_g80996_i0reverse_frame_3 - 0.12 12.5 3.1 0.16 12.2 3.1 1.2 1 0 0 1 1 1 0 zinc RING finger of MSL2 DUF2613 PF11021.8 NODE_88936_length_181_cov_1.643836_g80995_i0reverse_frame_3 - 0.07 13.3 0.0 0.091 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) ASTN_2_hairpin PF18577.1 NODE_88931_length_181_cov_1.664384_g80990_i0forward_frame_3 - 0.061 13.4 0.2 0.087 12.9 0.2 1.2 1 0 0 1 1 1 0 Astrotactin-2 C-terminal beta-hairpin domain LRR_5 PF13306.6 NODE_88928_length_181_cov_1.678082_g80987_i0reverse_frame_2 - 0.018 15.0 1.8 0.031 14.2 1.8 1.4 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) Gram_pos_anchor PF00746.21 NODE_88925_length_181_cov_1.684932_g80984_i0forward_frame_3 - 0.19 11.7 1.2 0.23 11.4 1.2 1.1 1 0 0 1 1 1 0 LPXTG cell wall anchor motif SR-25 PF10500.9 NODE_88925_length_181_cov_1.684932_g80984_i0forward_frame_2 - 0.45 10.1 3.3 0.44 10.1 3.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Helicase_C PF00271.31 NODE_88924_length_181_cov_1.684932_g80983_i0forward_frame_3 - 3.1e-08 33.9 0.0 4.4e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Put_Phosphatase PF06888.12 NODE_88920_length_181_cov_1.705479_g80979_i0reverse_frame_2 - 0.084 12.3 0.0 0.093 12.1 0.0 1.0 1 0 0 1 1 1 0 Putative Phosphatase APC_u14 PF16635.5 NODE_88918_length_181_cov_1.719178_g80977_i0reverse_frame_3 - 0.12 12.9 0.0 0.12 12.9 0.0 1.0 1 0 0 1 1 1 0 Unstructured region on APC between SAMP and APC_crr DUF4173 PF13777.6 NODE_88917_length_181_cov_1.719178_g80976_i0forward_frame_3 - 0.01 15.2 0.4 0.01 15.2 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) Rhabdo_M2 PF04785.12 NODE_88914_length_181_cov_1.726027_g80973_i0reverse_frame_3 - 0.12 11.7 0.3 0.13 11.5 0.3 1.0 1 0 0 1 1 1 0 Rhabdovirus matrix protein M2 PMT_2 PF13231.6 NODE_88913_length_181_cov_1.732877_g80972_i0forward_frame_2 - 0.02 15.1 0.4 0.02 15.1 0.4 1.0 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Cytochrom_B561 PF03188.16 NODE_88910_length_181_cov_1.746575_g80969_i0reverse_frame_2 - 0.051 13.7 0.2 0.055 13.6 0.2 1.1 1 0 0 1 1 1 0 Eukaryotic cytochrome b561 Tna_leader PF08053.11 NODE_88910_length_181_cov_1.746575_g80969_i0reverse_frame_2 - 2.6 8.2 6.8 2.2e+02 2.1 6.8 2.3 1 1 0 1 1 1 0 Tryptophanase operon leader peptide Ribosomal_S14 PF00253.21 NODE_88908_length_181_cov_1.767123_g80967_i0forward_frame_2 - 0.064 13.0 0.1 0.089 12.6 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e NPM1-C PF16276.5 NODE_88907_length_181_cov_1.767123_g80966_i0reverse_frame_2 - 0.01 15.8 0.0 0.017 15.1 0.0 1.4 1 1 0 1 1 1 0 Nucleophosmin C-terminal domain Metalloenzyme PF01676.18 NODE_88905_length_181_cov_1.773973_g80964_i0forward_frame_3 - 4.4e-17 62.3 0.0 4.7e-17 62.2 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Gin PF10764.9 NODE_88902_length_181_cov_1.801370_g80961_i0forward_frame_3 - 0.011 15.6 0.7 0.016 15.2 0.7 1.3 1 0 0 1 1 1 0 Inhibitor of sigma-G Gin MyTH4 PF00784.17 NODE_88896_length_181_cov_1.808219_g80955_i0reverse_frame_2 - 0.043 14.3 0.1 0.048 14.2 0.1 1.1 1 0 0 1 1 1 0 MyTH4 domain PHA_gran_rgn PF09650.10 NODE_88893_length_181_cov_1.815068_g80952_i0forward_frame_3 - 0.091 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) Ste5 PF11610.8 NODE_88892_length_181_cov_1.815068_g80951_i0reverse_frame_2 - 0.12 12.3 0.1 0.67 9.9 0.0 1.9 2 0 0 2 2 2 0 Scaffold protein Ste5, Fus3-binding region Dicistro_VP4 PF11492.8 NODE_88892_length_181_cov_1.815068_g80951_i0reverse_frame_2 - 0.18 11.8 0.0 0.23 11.4 0.0 1.1 1 0 0 1 1 1 0 Cricket paralysis virus, VP4 NDUF_B12 PF08122.12 NODE_88881_length_181_cov_1.890411_g80940_i0reverse_frame_3 - 0.12 12.5 0.6 0.18 11.9 0.6 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B12 subunit family PNPase_C PF12111.8 NODE_88881_length_181_cov_1.890411_g80940_i0reverse_frame_3 - 0.28 10.6 1.3 0.42 10.1 1.3 1.3 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks419.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks419.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks419.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks419.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:20:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FRG1 PF06229.12 NODE_18964_length_1014_cov_26.689479_g14486_i0reverse_frame_1 - 1.4 8.6 5.8 2 8.1 5.8 1.2 1 0 0 1 1 1 0 FRG1-like domain p450 PF00067.22 NODE_18904_length_1015_cov_684.008163_g14436_i0reverse_frame_2 - 2.4e-47 161.8 0.5 5.3e-47 160.6 0.5 1.4 1 1 0 1 1 1 1 Cytochrome P450 Glyco_hydro_3_C PF01915.22 NODE_18893_length_1016_cov_2.592253_g14431_i0forward_frame_3 - 3.3e-55 187.2 0.4 1.1e-54 185.6 0.3 1.7 2 0 0 2 2 2 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 NODE_18893_length_1016_cov_2.592253_g14431_i0forward_frame_3 - 1.6e-21 76.1 0.1 3.4e-21 75.1 0.1 1.6 1 0 0 1 1 1 1 Fibronectin type III-like domain DUF916 PF06030.12 NODE_18893_length_1016_cov_2.592253_g14431_i0forward_frame_3 - 0.0037 17.3 1.1 3.4 7.8 0.1 2.8 2 1 1 3 3 3 2 Bacterial protein of unknown function (DUF916) CARDB PF07705.11 NODE_18893_length_1016_cov_2.592253_g14431_i0forward_frame_3 - 0.012 15.9 0.1 0.03 14.6 0.1 1.7 1 0 0 1 1 1 0 CARDB Cullin_Nedd8 PF10557.9 NODE_18883_length_1016_cov_99.691131_g14421_i0forward_frame_2 - 0.12 12.5 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Cullin protein neddylation domain zf-RING_11 PF17123.5 NODE_18882_length_1016_cov_107.593272_g13398_i1reverse_frame_2 - 0.068 12.9 2.6 0.22 11.3 2.6 2.0 1 0 0 1 1 1 0 RING-like zinc finger Baculo_RING PF05883.11 NODE_18882_length_1016_cov_107.593272_g13398_i1reverse_frame_2 - 0.072 13.1 1.6 0.12 12.3 0.5 1.9 2 0 0 2 2 2 0 Baculovirus U-box/Ring-like domain DUF5479 PF17575.2 NODE_18882_length_1016_cov_107.593272_g13398_i1forward_frame_2 - 0.0036 17.8 0.0 0.011 16.3 0.0 1.8 1 0 0 1 1 1 1 Family of unknown function (DUF5479) RIO1 PF01163.22 ORF99585 - 2.6e-40 138.0 0.7 2.6e-40 138.0 0.7 1.6 2 0 0 2 2 2 1 RIO1 family APH PF01636.23 ORF99585 - 8.4e-10 39.0 5.7 3.6e-07 30.4 0.3 2.9 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kdo PF06293.14 ORF99585 - 5.2e-08 32.5 0.1 7.6e-06 25.4 0.1 2.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF99585 - 0.00079 18.8 0.1 0.0015 17.9 0.1 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase PF00069.25 ORF99585 - 0.014 14.7 0.0 0.025 13.9 0.0 1.4 1 0 0 1 1 1 0 Protein kinase domain EcKinase PF02958.20 ORF99585 - 0.093 12.0 0.1 0.16 11.3 0.1 1.4 1 0 0 1 1 1 0 Ecdysteroid kinase Abhydrolase_1 PF00561.20 ORF9884 - 2.1e-09 37.4 1.9 8.3e-09 35.5 1.9 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF9884 - 1e-07 31.5 0.0 0.0013 18.0 0.0 2.9 2 1 1 3 3 3 2 Serine aminopeptidase, S33 Abhydro_lipase PF04083.16 ORF9884 - 6.1e-07 28.9 0.1 1.9e-06 27.4 0.1 1.8 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region RCC1_2 PF13540.6 ORF98455 - 1.6e-16 59.6 25.1 0.00012 21.7 0.1 7.6 8 0 0 8 8 8 6 Regulator of chromosome condensation (RCC1) repeat Capsule_synth PF05159.14 ORF98455 - 0.14 11.6 0.5 26 4.1 0.0 3.6 3 1 2 5 5 5 0 Capsule polysaccharide biosynthesis protein DUF4951 PF16309.5 ORF98455 - 0.67 10.0 2.9 16 5.6 0.0 3.7 3 2 1 4 4 4 0 Domian of unknown function (DUF4951) Lip_prot_lig_C PF10437.9 ORF94642 - 1.4e-18 66.7 0.0 2.4e-17 62.7 0.0 2.2 2 0 0 2 2 2 1 Bacterial lipoate protein ligase C-terminus BPL_LplA_LipB PF03099.19 ORF94642 - 9.4e-10 38.5 0.0 3.9e-09 36.5 0.0 1.9 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family Xan_ur_permease PF00860.20 ORF93602 - 2.8e-31 108.6 32.5 3.5e-31 108.3 32.5 1.1 1 0 0 1 1 1 1 Permease family Sulfate_transp PF00916.20 ORF93602 - 0.21 10.3 23.4 0.5 9.1 21.4 2.4 1 1 1 2 2 2 0 Sulfate permease family Metallophos_2 PF12850.7 ORF90040 - 0.072 13.3 0.1 9.8 6.3 0.0 2.2 2 0 0 2 2 2 0 Calcineurin-like phosphoesterase superfamily domain TPR_1 PF00515.28 ORF90040 - 0.13 12.1 0.0 0.26 11.2 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat APG6_N PF17675.1 ORF88880 - 0.016 15.7 15.1 0.016 15.7 15.1 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region CENP-F_leu_zip PF10473.9 ORF88880 - 5.2 7.1 19.7 10 6.1 10.2 2.7 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Glyco_hydro_20b PF02838.15 ORF83468 - 0.46 11.3 4.0 4.2 8.2 0.9 2.6 2 1 0 2 2 2 0 Glycosyl hydrolase family 20, domain 2 Sulfotransfer_4 PF17784.1 ORF83256 - 0.032 14.1 0.1 4.1 7.2 0.0 2.2 2 0 0 2 2 2 0 Sulfotransferase domain RANK_CRD_2 PF18278.1 ORF78703 - 0.0069 16.5 0.4 0.017 15.3 0.4 1.7 1 0 0 1 1 1 1 Receptor activator of the NF-KB cysteine-rich repeat domain 2 WYL_2 PF10902.8 ORF75498 - 0.0071 16.7 0.0 0.012 15.9 0.0 1.4 1 0 0 1 1 1 1 WYL_2, Sm-like SH3 beta-barrel fold tRNA-synt_1b PF00579.25 ORF6873 - 0.1 11.9 0.0 0.24 10.7 0.0 1.6 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) His_Phos_2 PF00328.22 ORF6873 - 0.23 10.7 0.0 0.88 8.9 0.0 1.7 1 1 0 2 2 2 0 Histidine phosphatase superfamily (branch 2) Arm PF00514.23 ORF63269 - 8.1e-09 35.2 10.7 0.0019 18.1 0.0 6.4 6 0 0 6 6 6 3 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 ORF63269 - 0.00053 20.3 2.6 1.2 9.6 0.0 3.8 2 2 0 3 3 3 2 HEAT repeats HEAT PF02985.22 ORF63269 - 0.0017 18.5 3.5 5.6 7.5 0.0 5.4 5 1 1 6 6 6 2 HEAT repeat HEAT_EZ PF13513.6 ORF63269 - 0.037 14.5 4.0 0.17 12.4 0.0 3.9 3 1 2 5 5 5 0 HEAT-like repeat rve PF00665.26 ORF62998 - 5.6e-12 45.9 0.0 1.7e-11 44.4 0.0 1.9 1 1 0 1 1 1 1 Integrase core domain Pkinase PF00069.25 ORF62945 - 2.9e-52 177.7 0.0 3.6e-52 177.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62945 - 2.3e-27 95.9 0.0 3.5e-27 95.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF62945 - 0.029 13.7 0.1 0.047 13.0 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF62945 - 0.03 13.9 0.1 0.05 13.2 0.1 1.3 1 0 0 1 1 1 0 RIO1 family Pkinase_fungal PF17667.1 ORF62945 - 0.05 12.4 0.0 0.081 11.7 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF62945 - 0.057 13.3 0.3 1.4 8.8 0.0 2.6 2 1 1 3 3 3 0 Phosphotransferase enzyme family Phosphonate-bd PF12974.7 ORF58376 - 2.7e-71 240.0 0.0 3.8e-71 239.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 ORF58376 - 0.00058 19.4 0.7 0.0064 15.9 0.7 2.2 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1_3 PF16868.5 ORF58376 - 0.058 12.8 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 NMT1-like family YukC PF10140.9 ORF58376 - 0.074 11.9 0.1 0.16 10.8 0.1 1.6 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC zf-C3HC4_3 PF13920.6 ORF55403 - 3.3e-10 39.7 6.0 4.9e-10 39.1 6.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF55403 - 1.5e-08 34.4 6.0 2.4e-08 33.7 6.0 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF55403 - 0.00013 21.8 6.1 0.0012 18.6 6.9 2.0 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF55403 - 0.00031 21.0 7.9 0.00051 20.3 7.9 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF55403 - 0.0014 18.4 9.1 0.0023 17.8 9.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF55403 - 0.0058 16.4 4.4 0.06 13.1 1.1 2.4 2 0 0 2 2 2 1 RING-like zinc finger Leu_zip PF15294.6 ORF55403 - 0.0069 15.9 4.3 0.01 15.4 4.3 1.2 1 0 0 1 1 1 1 Leucine zipper zf-RING_5 PF14634.6 ORF55403 - 0.011 15.7 7.6 0.019 14.9 7.6 1.4 1 0 0 1 1 1 0 zinc-RING finger domain Activator_LAG-3 PF11498.8 ORF55403 - 0.33 9.9 11.9 0.46 9.4 11.9 1.1 1 0 0 1 1 1 0 Transcriptional activator LAG-3 Exonuc_VII_L PF02601.15 ORF55403 - 0.76 9.3 6.0 1 8.8 6.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit NEMO PF11577.8 ORF55403 - 1.5 8.8 16.9 2.5 8.2 3.7 2.4 1 1 1 2 2 2 0 NF-kappa-B essential modulator NEMO Fmp27_WPPW PF10359.9 ORF55403 - 2.4 6.9 6.1 3.1 6.5 6.1 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain TMF_TATA_bd PF12325.8 ORF55403 - 2.8 8.2 13.8 3.1 8.0 1.8 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding FAM176 PF14851.6 ORF55403 - 3.3 7.4 5.9 5.4 6.7 5.9 1.3 1 0 0 1 1 1 0 FAM176 family RecR PF02132.15 ORF55403 - 3.5 7.3 9.0 0.33 10.6 2.9 2.3 1 1 1 2 2 2 0 RecR protein zf-C3HC4_4 PF15227.6 ORF55403 - 4.5 7.5 7.6 25 5.1 8.0 2.0 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING NAD_Gly3P_dh_C PF07479.14 ORF5511 - 5.1e-46 156.5 0.9 8.1e-46 155.8 0.9 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 ORF5511 - 4.4e-34 117.7 0.1 6.8e-34 117.1 0.1 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DnaA_N PF11638.8 ORF5511 - 0.041 13.6 0.0 0.084 12.6 0.0 1.4 1 0 0 1 1 1 0 DnaA N-terminal domain NAD_binding_2 PF03446.15 ORF5511 - 0.059 13.5 0.1 0.18 12.0 0.0 1.8 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase FecCD PF01032.18 ORF4813 - 2.9e-90 302.4 34.0 3.6e-90 302.2 34.0 1.0 1 0 0 1 1 1 1 FecCD transport family eRF1_3 PF03465.15 ORF42292 - 1.8e-24 86.4 0.0 4.2e-24 85.2 0.0 1.7 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.15 ORF42292 - 4.6e-20 71.9 0.1 8e-20 71.1 0.1 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_2 PF03464.15 ORF42292 - 5e-18 65.7 0.2 8.2e-18 65.0 0.2 1.4 1 0 0 1 1 1 1 eRF1 domain 2 BTB PF00651.31 ORF42193 - 0.00011 22.3 0.1 0.00024 21.3 0.1 1.6 1 0 0 1 1 1 1 BTB/POZ domain SIT PF15330.6 ORF38465 - 2.2e-05 24.9 1.6 0.032 14.7 0.1 2.9 3 0 0 3 3 3 2 SHP2-interacting transmembrane adaptor protein, SIT Cadherin_C_2 PF16492.5 ORF38465 - 0.0046 17.7 1.0 0.85 10.4 0.2 2.8 2 0 0 2 2 2 1 Cadherin cytoplasmic C-terminal DUF4834 PF16118.5 ORF38465 - 0.091 13.7 0.1 0.091 13.7 0.1 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4834) DUF4577 PF15145.6 ORF38465 - 0.53 10.3 5.9 2.4 8.2 1.1 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4577) Ctr PF04145.15 ORF38465 - 1.5 9.4 6.3 0.24 12.0 1.3 2.1 2 1 0 2 2 2 0 Ctr copper transporter family EphA2_TM PF14575.6 ORF38465 - 4.8 8.1 6.9 5 8.1 0.0 3.5 4 0 0 4 4 4 0 Ephrin type-A receptor 2 transmembrane domain Cupin_8 PF13621.6 ORF27331 - 8.6e-22 78.1 0.2 1.5e-21 77.3 0.0 1.5 2 0 0 2 2 2 1 Cupin-like domain JmjC PF02373.22 ORF27331 - 7.8e-08 32.8 0.0 1.8e-07 31.6 0.0 1.6 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_1 PF00190.22 ORF27331 - 0.0034 17.0 0.0 0.0047 16.5 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_4 PF08007.12 ORF27331 - 0.074 12.5 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 Cupin superfamily protein dsrm PF00035.26 ORF21510 - 8.2e-14 52.1 1.4 1e-05 26.1 0.2 2.4 2 0 0 2 2 2 2 Double-stranded RNA binding motif Dicer_dimer PF03368.14 ORF21510 - 2.7e-05 24.3 0.6 0.13 12.5 0.1 2.4 2 0 0 2 2 2 2 Dicer dimerisation domain Nsp1_C PF05064.13 ORF20319 - 0.08 12.8 0.3 2.8 7.8 0.1 2.3 2 0 0 2 2 2 0 Nsp1-like C-terminal region tRNA-synt_1b PF00579.25 ORF15806 - 0.1 11.9 0.0 0.24 10.7 0.0 1.6 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) His_Phos_2 PF00328.22 ORF15806 - 0.23 10.7 0.0 0.88 8.9 0.0 1.7 1 1 0 2 2 2 0 Histidine phosphatase superfamily (branch 2) Phage_holin_3_3 PF16083.5 ORF14805 - 0.098 12.8 1.4 0.28 11.3 1.4 1.8 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III DMT_YdcZ PF04657.13 ORF14805 - 0.35 11.1 8.6 1.9 8.7 4.0 2.8 1 1 1 2 2 2 0 Putative inner membrane exporter, YdcZ TRP PF06011.12 ORF14805 - 1.1 7.9 13.3 0.46 9.2 11.0 1.5 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel ChlI PF13541.6 ORF11119 - 3.5e-10 39.8 0.1 8.5e-10 38.5 0.0 1.7 2 0 0 2 2 2 1 Subunit ChlI of Mg-chelatase Lon_C PF05362.13 ORF11119 - 5.9e-08 32.5 0.1 1.3e-07 31.4 0.1 1.5 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_25 PF13481.6 ORF11119 - 2.2e-07 30.6 0.1 6.3e-07 29.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATPase PF06745.13 ORF11119 - 4.2e-06 26.3 0.0 0.00014 21.2 0.0 2.0 1 1 1 2 2 2 1 KaiC HPP PF04982.13 ORF11077 - 1.3e-70 235.3 23.7 1.5e-36 125.2 7.2 2.6 3 0 0 3 3 3 2 HPP family Cupin_8 PF13621.6 ORF106714 - 4.4e-31 108.5 0.0 6.6e-31 107.9 0.0 1.2 1 0 0 1 1 1 1 Cupin-like domain JmjC PF02373.22 ORF106714 - 4.7e-07 30.2 0.0 1.2e-06 29.0 0.0 1.7 1 1 0 1 1 1 1 JmjC domain, hydroxylase MBOAT PF03062.19 ORF10041 - 8.1e-26 91.2 20.2 8.1e-26 91.2 20.2 1.5 2 0 0 2 2 2 1 MBOAT, membrane-bound O-acyltransferase family MBOAT_2 PF13813.6 ORF10041 - 3.1e-06 27.4 1.9 9.3e-06 25.8 1.9 1.8 1 0 0 1 1 1 1 Membrane bound O-acyl transferase family Cpn60_TCP1 PF00118.24 ORF10037 - 2.5e-46 158.4 7.7 3e-46 158.1 7.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family MGAT2 PF05060.14 ORF10037 - 0.28 10.2 0.2 0.43 9.6 0.2 1.2 1 0 0 1 1 1 0 N-acetylglucosaminyltransferase II (MGAT2) DUF1192 PF06698.11 ORF10037 - 1.6 8.9 3.6 1.5 8.9 1.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) MalF_P2 PF14785.6 NODE_19149_length_1009_cov_3.006160_g14630_i0reverse_frame_1 - 3.8e-59 199.4 0.2 4.8e-59 199.1 0.2 1.1 1 0 0 1 1 1 1 Maltose transport system permease protein MalF P2 domain TM_PBP2_N PF16296.5 NODE_19149_length_1009_cov_3.006160_g14630_i0reverse_frame_1 - 0.00085 19.4 5.9 0.0034 17.5 0.0 3.2 3 1 0 3 3 3 2 N-terminal of TM subunit in PBP-dependent ABC transporters IPPT PF01715.17 NODE_19147_length_1009_cov_3.705339_g14628_i0reverse_frame_1 - 3.6e-47 161.1 0.0 4.6e-47 160.7 0.0 1.1 1 0 0 1 1 1 1 IPP transferase IPT PF01745.16 NODE_19147_length_1009_cov_3.705339_g14628_i0reverse_frame_1 - 0.00013 21.4 0.0 0.00017 21.0 0.0 1.1 1 0 0 1 1 1 1 Isopentenyl transferase AAA_33 PF13671.6 NODE_19147_length_1009_cov_3.705339_g14628_i0reverse_frame_1 - 0.0052 16.9 0.0 0.0096 16.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_19147_length_1009_cov_3.705339_g14628_i0reverse_frame_1 - 0.027 14.9 0.1 0.041 14.3 0.1 1.3 1 1 0 1 1 1 0 AAA ATPase domain Zeta_toxin PF06414.12 NODE_19147_length_1009_cov_3.705339_g14628_i0reverse_frame_1 - 0.028 13.7 0.0 0.04 13.2 0.0 1.3 1 1 0 1 1 1 0 Zeta toxin TIP49 PF06068.13 NODE_19147_length_1009_cov_3.705339_g14628_i0reverse_frame_1 - 0.06 12.5 0.1 0.086 12.0 0.1 1.1 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_18 PF13238.6 NODE_19147_length_1009_cov_3.705339_g14628_i0reverse_frame_1 - 0.17 12.5 0.0 0.29 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 NODE_19147_length_1009_cov_3.705339_g14628_i0reverse_frame_1 - 0.17 11.2 0.0 0.29 10.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI IBR PF01485.21 NODE_19003_length_1013_cov_4.069530_g14516_i0reverse_frame_2 - 1.1e-11 44.8 16.4 4.3e-11 42.9 7.8 4.3 3 1 1 4 4 4 3 IBR domain, a half RING-finger domain UBA_4 PF14555.6 NODE_19003_length_1013_cov_4.069530_g14516_i0reverse_frame_2 - 0.0005 19.8 0.3 0.00097 18.9 0.3 1.5 1 0 0 1 1 1 1 UBA-like domain zf-RING_5 PF14634.6 NODE_19003_length_1013_cov_4.069530_g14516_i0reverse_frame_2 - 0.0011 18.9 12.0 0.0011 18.9 12.0 3.5 3 0 0 3 3 3 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_19003_length_1013_cov_4.069530_g14516_i0reverse_frame_2 - 0.0053 16.6 9.5 0.0053 16.6 9.5 3.7 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_19003_length_1013_cov_4.069530_g14516_i0reverse_frame_2 - 0.017 15.4 10.2 0.017 15.4 10.2 3.8 3 1 0 3 3 3 0 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_19003_length_1013_cov_4.069530_g14516_i0reverse_frame_2 - 3.6 7.5 34.8 0.09 12.7 10.1 4.1 4 0 0 4 4 4 0 Zinc finger, C3HC4 type (RING finger) DNA_ligase_ZBD PF03119.16 NODE_19003_length_1013_cov_4.069530_g14516_i0reverse_frame_2 - 5 7.2 9.3 1 9.5 1.9 2.9 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain DXP_synthase_N PF13292.6 NODE_19003_length_1013_cov_4.069530_g14516_i0forward_frame_2 - 0.12 11.6 0.0 0.24 10.5 0.1 1.4 2 0 0 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase WD40 PF00400.32 NODE_18964_length_1014_cov_26.689479_g14486_i0reverse_frame_3 - 0.0011 19.8 1.6 0.095 13.6 0.1 2.6 1 1 1 2 2 2 2 WD domain, G-beta repeat Gliadin PF13016.6 NODE_18964_length_1014_cov_26.689479_g14486_i0forward_frame_2 - 0.6 10.6 5.7 0.91 10.0 2.5 2.3 2 0 0 2 2 2 0 Cys-rich Gliadin N-terminal Aa_trans PF01490.18 ORF95742 - 8.9e-20 70.8 10.5 1.5e-19 70.0 10.5 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein HIP1_clath_bdg PF16515.5 ORF89345 - 0.0005 20.6 2.1 0.0005 20.6 2.1 3.5 2 1 1 3 3 3 1 Clathrin-binding domain of Huntingtin-interacting protein 1 CALCOCO1 PF07888.11 ORF89345 - 0.00066 18.7 19.8 0.00066 18.7 19.8 2.2 2 0 0 2 2 2 1 Calcium binding and coiled-coil domain (CALCOCO1) like CCDC144C PF14915.6 ORF89345 - 0.00072 18.8 15.2 0.00072 18.8 15.2 2.5 2 1 0 2 2 2 1 CCDC144C protein coiled-coil region DUF4200 PF13863.6 ORF89345 - 0.0093 16.4 18.3 0.0093 16.4 18.3 2.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4200) APG6_N PF17675.1 ORF89345 - 0.014 15.9 24.7 0.014 15.9 24.7 3.0 3 1 0 3 3 2 0 Apg6 coiled-coil region bZIP_1 PF00170.21 ORF89345 - 0.015 15.4 4.5 0.015 15.4 4.5 3.8 3 1 1 4 4 4 0 bZIP transcription factor Spc7 PF08317.11 ORF89345 - 0.018 14.0 28.9 0.032 13.1 17.3 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein TPR_MLP1_2 PF07926.12 ORF89345 - 0.018 15.1 32.8 0.21 11.6 0.8 4.3 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein Laminin_II PF06009.12 ORF89345 - 0.022 14.8 1.6 0.022 14.8 1.6 3.2 2 2 1 3 3 3 0 Laminin Domain II JIP_LZII PF16471.5 ORF89345 - 0.025 14.7 17.5 0.12 12.5 0.7 3.8 2 2 1 3 3 3 0 JNK-interacting protein leucine zipper II Lebercilin PF15619.6 ORF89345 - 0.027 14.1 32.6 0.026 14.2 5.7 3.2 2 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease CdvA PF18822.1 ORF89345 - 0.046 13.5 20.0 0.35 10.7 2.2 3.6 2 1 1 3 3 3 0 CdvA-like coiled-coil domain YabA PF06156.13 ORF89345 - 0.055 14.1 0.4 0.055 14.1 0.4 3.3 3 0 0 3 3 3 0 Initiation control protein YabA CENP-F_leu_zip PF10473.9 ORF89345 - 0.082 12.9 33.2 0.52 10.3 4.5 3.3 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FapA PF03961.13 ORF89345 - 0.19 10.3 13.1 1.5 7.4 0.5 2.1 2 0 0 2 2 2 0 Flagellar Assembly Protein A DUF1664 PF07889.12 ORF89345 - 0.23 11.5 12.6 0.24 11.4 2.4 3.2 2 2 2 4 4 3 0 Protein of unknown function (DUF1664) NAPRTase_C PF17956.1 ORF89345 - 0.29 11.6 7.8 0.17 12.3 1.1 2.9 2 2 1 3 3 2 0 Nicotinate phosphoribosyltransferase C-terminal domain AAA_13 PF13166.6 ORF89345 - 0.29 9.7 14.2 0.13 10.9 6.7 2.1 2 0 0 2 2 2 0 AAA domain GIT_CC PF16559.5 ORF89345 - 0.44 10.4 6.5 1.3 8.9 0.3 3.0 2 1 1 3 3 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor SHE3 PF17078.5 ORF89345 - 0.46 10.2 14.5 0.46 10.2 3.6 3.0 2 1 1 3 3 3 0 SWI5-dependent HO expression protein 3 CASP_C PF08172.12 ORF89345 - 0.53 9.6 14.7 0.095 12.0 9.2 2.4 2 1 0 2 2 2 0 CASP C terminal DASH_Dam1 PF08653.10 ORF89345 - 0.7 9.7 2.3 3.5 7.5 0.1 3.0 2 1 2 4 4 3 0 DASH complex subunit Dam1 ING PF12998.7 ORF89345 - 0.99 10.0 11.5 12 6.6 4.5 3.2 2 1 1 3 3 3 0 Inhibitor of growth proteins N-terminal histone-binding DUF4735 PF15882.5 ORF89345 - 1.1 8.7 4.5 0.86 9.0 2.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4735) DUF4763 PF15960.5 ORF89345 - 1.1 8.5 18.3 0.044 13.1 9.0 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4763) DUF948 PF06103.11 ORF89345 - 1.2 9.5 7.0 2.7 8.3 0.4 3.1 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) EzrA PF06160.12 ORF89345 - 1.3 7.2 19.3 0.62 8.2 0.6 2.4 2 1 0 2 2 2 0 Septation ring formation regulator, EzrA FlxA PF14282.6 ORF89345 - 1.9 8.6 10.7 1.1 9.3 3.0 2.7 2 0 0 2 2 2 0 FlxA-like protein DUF4047 PF13256.6 ORF89345 - 3.8 7.7 8.5 0.38 11.0 1.5 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4047) DUF4407 PF14362.6 ORF89345 - 3.8 6.8 23.5 1.1 8.5 1.5 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4407) Cnn_1N PF07989.11 ORF89345 - 4.4 7.5 22.1 2.9 8.1 11.0 3.8 2 2 1 3 3 3 0 Centrosomin N-terminal motif 1 Prominin PF05478.11 ORF89345 - 4.5 5.1 11.5 4.9 5.0 0.2 2.5 2 1 0 2 2 2 0 Prominin DUF812 PF05667.11 ORF89345 - 5.1 5.9 25.3 0.59 9.0 14.7 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF812) LPP PF04728.13 ORF89345 - 5.2 7.5 6.5 4 7.9 0.5 3.5 2 2 2 4 4 4 0 Lipoprotein leucine-zipper DLP_helical PF18709.1 ORF89345 - 8.5 5.5 11.9 0.72 9.0 2.1 2.7 2 1 0 2 2 2 0 Dynamin-like helical domain PRKG1_interact PF15898.5 ORF89345 - 9.8 7.1 28.7 0.037 14.9 12.4 3.3 3 1 0 3 3 2 0 cGMP-dependent protein kinase interacting domain GAS2 PF02187.17 ORF88618 - 0.0063 16.6 0.5 0.031 14.4 0.0 2.3 2 0 0 2 2 2 1 Growth-Arrest-Specific Protein 2 Domain DUF948 PF06103.11 ORF88618 - 0.15 12.3 5.3 4.4 7.6 0.2 3.0 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) HOOK PF05622.12 ORF88618 - 0.17 10.0 30.9 0.14 10.3 13.4 2.1 1 1 1 2 2 2 0 HOOK protein DUF4407 PF14362.6 ORF88618 - 0.26 10.6 16.6 0.45 9.8 16.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Herpes_UL25 PF01499.16 ORF88618 - 0.44 9.0 13.8 0.29 9.6 12.1 1.4 1 1 0 1 1 1 0 Herpesvirus UL25 family Lebercilin PF15619.6 ORF88618 - 0.85 9.3 37.0 3.4 7.3 37.0 2.0 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease CorA PF01544.18 ORF88618 - 0.98 8.7 12.6 0.88 8.8 11.2 1.5 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein NAPRTase_C PF17956.1 ORF88618 - 1.3 9.5 10.6 0.18 12.2 1.2 3.1 2 1 0 3 3 3 0 Nicotinate phosphoribosyltransferase C-terminal domain DUF3584 PF12128.8 ORF88618 - 2.1 5.8 27.9 2.6 5.4 27.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AKNA PF12443.8 ORF88618 - 2.3 8.9 20.2 0.7 10.6 4.6 3.3 2 1 2 4 4 3 0 AT-hook-containing transcription factor Phage_GP20 PF06810.11 ORF88618 - 4.1 7.2 14.9 2.4 8.0 2.3 3.2 1 1 0 2 2 2 0 Phage minor structural protein GP20 Sec34 PF04136.15 ORF88618 - 5.1 7.0 14.6 5.3 6.9 5.8 2.8 2 1 0 2 2 2 0 Sec34-like family Prominin PF05478.11 ORF88618 - 5.3 4.9 10.5 7.9 4.3 10.5 1.2 1 0 0 1 1 1 0 Prominin BLOC1_2 PF10046.9 ORF88618 - 5.5 7.4 11.1 4.3 7.7 3.2 3.0 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GAS PF13851.6 ORF88618 - 6.6 6.0 35.6 0.87 8.9 11.1 2.7 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding Seryl_tRNA_N PF02403.22 ORF88618 - 7 6.9 19.9 14 6.0 3.3 2.8 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain UPF0242 PF06785.11 ORF88618 - 9.6 6.3 39.4 0.082 13.0 16.9 2.5 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus rve PF00665.26 ORF88050 - 0.00021 21.5 0.0 0.00053 20.2 0.0 1.7 1 1 0 1 1 1 1 Integrase core domain MFS_1 PF07690.16 ORF86679 - 2.1e-23 82.9 49.3 6e-13 48.4 25.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF86679 - 2.6e-22 79.3 25.5 2.6e-14 53.0 2.4 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter Vinculin PF01044.19 ORF830 - 0.076 11.2 0.2 0.12 10.6 0.2 1.4 1 1 0 1 1 1 0 Vinculin family GTP_EFTU PF00009.27 ORF830 - 0.14 11.6 1.5 0.27 10.7 0.2 1.7 1 1 0 2 2 2 0 Elongation factor Tu GTP binding domain zf-RanBP PF00641.18 ORF81984 - 1.9e-12 46.3 34.6 5.6e-06 25.6 1.3 4.8 4 0 0 4 4 4 4 Zn-finger in Ran binding protein and others zf-CCCH_3 PF15663.5 ORF81984 - 2e-05 24.8 0.2 5.5e-05 23.4 0.2 1.7 1 0 0 1 1 1 1 Zinc-finger containing family zf_CCCH_4 PF18345.1 ORF81984 - 3.5e-05 23.7 3.3 9.7e-05 22.3 3.3 1.8 1 0 0 1 1 1 1 Zinc finger domain Zn_ribbon_SprT PF17283.2 ORF81984 - 0.0022 17.8 0.7 0.0022 17.8 0.7 4.8 3 1 1 4 4 4 1 SprT-like zinc ribbon domain zf-CCCH PF00642.24 ORF81984 - 0.0039 17.1 2.8 0.015 15.2 2.8 2.1 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Torus PF16131.5 ORF81984 - 0.0072 17.0 0.4 0.0072 17.0 0.4 1.7 2 0 0 2 2 2 1 Torus domain DZR PF12773.7 ORF81984 - 0.066 13.2 22.5 0.093 12.8 13.3 2.9 2 0 0 2 2 2 0 Double zinc ribbon DUF1376 PF07120.11 ORF81130 - 0.05 13.9 0.0 1.4 9.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1376) ABC_tran PF00005.27 ORF80403 - 2.9e-32 112.0 0.0 8.2e-32 110.6 0.0 1.7 2 0 0 2 2 2 1 ABC transporter TOBE_2 PF08402.10 ORF80403 - 2.5e-17 62.8 0.0 5.8e-17 61.6 0.0 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 ORF80403 - 7.8e-06 25.9 0.7 0.012 15.4 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF80403 - 0.0054 16.2 0.5 0.16 11.4 0.1 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF80403 - 0.018 15.4 0.0 0.035 14.5 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain PhoH PF02562.16 ORF80403 - 0.022 14.2 0.1 4.6 6.6 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein AAA_22 PF13401.6 ORF80403 - 0.028 14.7 0.5 0.13 12.5 0.5 2.0 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF80403 - 0.044 13.5 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain TOBE PF03459.17 ORF80403 - 0.046 14.0 0.0 0.1 12.9 0.0 1.5 1 0 0 1 1 1 0 TOBE domain RsgA_GTPase PF03193.16 ORF80403 - 0.13 12.1 0.1 0.44 10.4 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase Pkinase PF00069.25 ORF79861 - 1.7e-55 188.3 0.0 2e-55 188.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF79861 - 5.6e-41 140.5 0.0 7.7e-41 140.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF79861 - 1.3e-10 41.1 0.0 2.3e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF79861 - 1.1e-05 24.4 0.0 1.9e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF79861 - 0.063 12.6 0.1 0.13 11.6 0.1 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Cut8 PF08559.10 ORF79861 - 0.13 11.8 0.6 0.92 9.1 0.1 2.3 3 0 0 3 3 3 0 Cut8, nuclear proteasome tether protein DUF2600 PF10776.9 ORF79782 - 0.078 11.8 0.0 0.14 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2600) Methyltransf_3 PF01596.17 ORF7663 - 0.00036 19.8 0.0 0.00058 19.1 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF7663 - 0.0015 19.6 0.1 0.0041 18.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain DUF4115 PF13464.6 ORF73934 - 6.4e-24 83.9 0.0 1.6e-23 82.6 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4115) HTH_25 PF13413.6 ORF73934 - 4.5e-15 55.2 0.6 7.1e-15 54.6 0.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 ORF73934 - 1.8e-08 34.6 0.8 1.8e-08 34.6 0.8 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 ORF73934 - 1e-07 31.9 0.0 1.9e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 ORF73934 - 2.1e-07 30.9 0.0 3.2e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF73934 - 0.09 12.6 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain DUF4614 PF15391.6 ORF73934 - 2.1 8.3 12.6 20 5.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4614) DUF2040 PF09745.9 ORF71742 - 1.5e-14 54.1 22.2 1.5e-14 54.1 22.2 3.7 3 1 0 3 3 3 1 Coiled-coil domain-containing protein 55 (DUF2040) Lipase_GDSL_2 PF13472.6 ORF70109 - 9.2e-06 26.2 0.0 1.5e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family ALGX PF16822.5 ORF70109 - 0.018 14.7 0.1 0.029 14.1 0.1 1.3 1 0 0 1 1 1 0 SGNH hydrolase-like domain, acetyltransferase AlgX Asp PF00026.23 ORF68599 - 3.1e-18 66.3 0.0 3.8e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF68599 - 0.0044 16.8 0.0 0.0069 16.2 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Toxin_17 PF08086.11 ORF68599 - 0.034 14.4 2.8 0.077 13.3 2.8 1.6 1 0 0 1 1 1 0 Ergtoxin family SUI1 PF01253.22 ORF63996 - 2.6e-13 50.3 0.0 4.5e-13 49.5 0.0 1.4 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 ORF63996 - 0.022 15.0 0.0 0.047 14.0 0.0 1.6 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Asp PF00026.23 ORF63581 - 3.1e-18 66.3 0.0 3.8e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF63581 - 0.0044 16.8 0.0 0.0069 16.2 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Toxin_17 PF08086.11 ORF63581 - 0.034 14.4 2.8 0.077 13.3 2.8 1.6 1 0 0 1 1 1 0 Ergtoxin family DnaJ PF00226.31 ORF62329 - 3.6e-13 49.4 0.1 6.2e-13 48.7 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain Ank_2 PF12796.7 ORF57715 - 1.3e-09 38.5 0.0 2.5e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF57715 - 1.3e-08 35.0 0.1 0.0088 16.3 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF57715 - 1.6e-08 34.6 0.9 0.0042 17.5 0.1 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF57715 - 3.2e-08 33.2 0.1 0.019 15.4 0.0 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF57715 - 1.1e-05 25.9 0.0 2.8e-05 24.6 0.0 1.8 1 0 0 1 1 1 1 Ankyrin repeats (many copies) PKD_channel PF08016.12 ORF52646 - 5.3e-16 58.3 26.6 6.2e-16 58.1 26.6 1.0 1 0 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF52646 - 8.2e-05 21.9 36.5 0.00018 20.8 36.5 1.6 1 1 0 1 1 1 1 Ion transport protein DUF2855 PF11017.8 ORF52067 - 6.2e-41 141.3 0.0 9e-41 140.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2855) S1 PF00575.23 ORF48817 - 2.3e-17 63.1 8.2 1.2e-06 28.7 0.4 4.2 4 0 0 4 4 4 3 S1 RNA binding domain PCB_OB PF17092.5 ORF48817 - 0.018 15.8 0.8 0.018 15.8 0.8 2.7 3 0 0 3 3 3 0 Penicillin-binding protein OB-like domain La_HTH_kDCL PF18177.1 ORF48817 - 0.024 14.9 0.0 0.066 13.5 0.0 1.7 1 0 0 1 1 1 0 La HTH in kinetoplastid DICER domain CSD PF00313.22 ORF48817 - 0.054 13.4 0.1 18 5.3 0.0 2.6 2 0 0 2 2 2 0 'Cold-shock' DNA-binding domain Vinculin PF01044.19 ORF47705 - 0.076 11.2 0.2 0.12 10.6 0.2 1.4 1 1 0 1 1 1 0 Vinculin family GTP_EFTU PF00009.27 ORF47705 - 0.14 11.6 1.5 0.27 10.7 0.2 1.7 1 1 0 2 2 2 0 Elongation factor Tu GTP binding domain Band_7 PF01145.25 ORF43633 - 7.8e-14 52.1 1.7 7.8e-14 52.1 1.7 2.3 1 1 0 2 2 2 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 ORF43633 - 0.0033 17.2 5.3 0.006 16.3 0.3 2.3 2 0 0 2 2 2 1 SPFH domain-Band 7 family DUF948 PF06103.11 ORF43633 - 0.22 11.8 2.8 1.5 9.1 0.6 2.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Carbpep_Y_N PF05388.11 ORF43633 - 0.25 11.9 6.5 0.24 11.9 4.3 2.0 1 1 0 2 2 2 0 Carboxypeptidase Y pro-peptide Pox_A21 PF05323.12 ORF43633 - 0.98 10.0 5.0 0.48 11.0 2.2 2.0 2 0 0 2 2 2 0 Poxvirus A21 Protein Asp PF00026.23 ORF4276 - 3.1e-18 66.3 0.0 3.8e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF4276 - 0.0044 16.8 0.0 0.0069 16.2 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Toxin_17 PF08086.11 ORF4276 - 0.034 14.4 2.8 0.077 13.3 2.8 1.6 1 0 0 1 1 1 0 Ergtoxin family zf-NF-X1 PF01422.17 ORF41383 - 0.38 10.8 30.7 2 8.5 6.4 2.9 2 1 0 2 2 2 0 NF-X1 type zinc finger Vinculin PF01044.19 ORF39940 - 0.076 11.2 0.2 0.12 10.6 0.2 1.4 1 1 0 1 1 1 0 Vinculin family GTP_EFTU PF00009.27 ORF39940 - 0.14 11.6 1.5 0.27 10.7 0.2 1.7 1 1 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA PF00004.29 ORF35848 - 7e-05 23.3 0.0 0.00012 22.6 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Zot PF05707.12 ORF35848 - 0.0087 15.7 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) GAF_3 PF13492.6 ORF35848 - 0.038 14.3 0.0 0.11 12.9 0.0 1.7 1 0 0 1 1 1 0 GAF domain DUF4183 PF13799.6 ORF35848 - 0.049 13.4 0.0 0.48 10.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4183) RHD3 PF05879.12 ORF35625 - 5.1e-17 61.3 10.5 3.9e-13 48.5 5.9 2.0 1 1 1 2 2 2 2 Root hair defective 3 GTP-binding protein (RHD3) Maelstrom PF13017.6 ORF35625 - 0.037 13.7 0.6 0.073 12.7 0.6 1.5 1 1 0 1 1 1 0 piRNA pathway germ-plasm component eIF-4B PF06273.11 ORF35625 - 0.58 9.2 3.9 1 8.3 3.7 1.5 1 1 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Aa_trans PF01490.18 ORF33852 - 4.5e-37 127.7 11.8 5.6e-37 127.4 11.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Cytochrom_B_C PF00032.17 ORF33852 - 0.0075 16.5 4.8 1.4 9.3 0.5 3.2 1 1 1 2 2 2 2 Cytochrome b(C-terminal)/b6/petD DUF4311 PF14188.6 ORF33852 - 0.14 11.9 2.9 0.16 11.7 0.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4311) Asp PF00026.23 ORF31485 - 3.1e-18 66.3 0.0 3.8e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF31485 - 0.0044 16.8 0.0 0.0069 16.2 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Toxin_17 PF08086.11 ORF31485 - 0.034 14.4 2.8 0.077 13.3 2.8 1.6 1 0 0 1 1 1 0 Ergtoxin family rve PF00665.26 ORF31362 - 0.00021 21.5 0.0 0.00053 20.2 0.0 1.7 1 1 0 1 1 1 1 Integrase core domain Vps8 PF12816.7 ORF27378 - 0.1 12.1 0.0 0.17 11.4 0.0 1.4 1 0 0 1 1 1 0 Golgi CORVET complex core vacuolar protein 8 Clathrin PF00637.20 ORF27378 - 0.15 11.9 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 Region in Clathrin and VPS Toprim_C_rpt PF13368.6 ORF23560 - 0.13 12.2 0.0 0.98 9.5 0.0 2.3 2 0 0 2 2 2 0 Topoisomerase C-terminal repeat APG5 PF04106.12 ORF22166 - 2.7e-31 109.0 0.6 3.4e-31 108.6 0.6 1.1 1 0 0 1 1 1 1 Autophagy protein Apg5 SpoU_methylase PF00588.19 ORF21593 - 1.3e-23 83.8 0.0 1.9e-23 83.2 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family Aa_trans PF01490.18 ORF21267 - 4.5e-37 127.7 11.8 5.6e-37 127.4 11.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Cytochrom_B_C PF00032.17 ORF21267 - 0.0075 16.5 4.8 1.4 9.3 0.5 3.2 1 1 1 2 2 2 2 Cytochrome b(C-terminal)/b6/petD DUF4311 PF14188.6 ORF21267 - 0.14 11.9 2.9 0.16 11.7 0.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4311) Peptidase_C2 PF00648.21 ORF15579 - 1.4e-43 149.1 0.0 2.8e-41 141.5 0.0 2.0 2 0 0 2 2 2 2 Calpain family cysteine protease Arginosuc_synth PF00764.19 ORF14168 - 1.5e-64 218.7 0.0 1.8e-64 218.5 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Actino_peptide PF14408.6 ORF14168 - 0.16 12.1 0.1 0.78 9.9 0.2 2.0 2 0 0 2 2 2 0 Ribosomally synthesised peptide in actinomycetes PPDK_N PF01326.19 ORF11736 - 8.7e-21 74.5 0.0 3.4e-08 33.1 0.0 3.9 2 2 2 4 4 4 4 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DUF3492 PF11997.8 ORF11736 - 0.0023 17.7 0.1 0.0033 17.2 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3492) Vinculin PF01044.19 ORF109460 - 0.076 11.2 0.2 0.12 10.6 0.2 1.4 1 1 0 1 1 1 0 Vinculin family GTP_EFTU PF00009.27 ORF109460 - 0.14 11.6 1.5 0.27 10.7 0.2 1.7 1 1 0 2 2 2 0 Elongation factor Tu GTP binding domain Usp PF00582.26 ORF108944 - 6.7e-13 49.4 0.6 3.1e-06 27.7 0.0 2.5 2 1 0 2 2 2 2 Universal stress protein family DUF4821 PF16092.5 ORF108047 - 1.9e-52 178.5 2.3 3.3e-52 177.7 2.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4821) zf-NF-X1 PF01422.17 ORF106068 - 0.39 10.8 30.7 2 8.5 6.4 2.9 2 1 0 2 2 2 0 NF-X1 type zinc finger PUB PF09409.10 ORF105649 - 1.3e-09 37.8 0.0 2.7e-09 36.9 0.0 1.5 1 0 0 1 1 1 1 PUB domain DUF4050 PF13259.6 ORF105649 - 0.65 10.3 6.7 1 9.6 6.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) NPR3 PF03666.13 ORF105649 - 2.3 6.9 8.1 2.8 6.6 8.1 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 ORF105649 - 5.1 5.7 13.3 6.8 5.3 13.3 1.1 1 0 0 1 1 1 0 Presenilin HemY_N PF07219.13 ORF105649 - 5.2 7.3 9.2 14 5.9 9.2 1.8 1 0 0 1 1 1 0 HemY protein N-terminus RR_TM4-6 PF06459.12 ORF105649 - 8.9 6.0 14.6 13 5.5 14.6 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Amidase PF01425.21 ORF104635 - 1.1e-27 97.1 0.0 8e-26 91.0 0.0 2.0 1 1 0 1 1 1 1 Amidase PRO8NT PF08082.11 ORF104635 - 0.12 12.3 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 PRO8NT (NUC069), PrP8 N-terminal domain MutL_C PF08676.11 NODE_19147_length_1009_cov_3.705339_g14628_i0reverse_frame_3 - 1.7e-22 79.8 0.3 2.4e-22 79.3 0.3 1.2 1 0 0 1 1 1 1 MutL C terminal dimerisation domain WRC PF08879.10 NODE_19108_length_1010_cov_134.740513_g13797_i1reverse_frame_2 - 6.6e-05 22.5 16.3 0.00013 21.6 10.2 3.4 2 1 1 3 3 3 1 WRC Seadorna_Vp10 PF07322.11 NODE_19108_length_1010_cov_134.740513_g13797_i1reverse_frame_2 - 0.2 11.1 0.1 0.28 10.5 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus Vp10 WD40 PF00400.32 NODE_19102_length_1010_cov_214.001026_g14592_i0forward_frame_3 - 5.4e-07 30.2 2.0 0.0002 22.1 0.0 3.5 3 0 0 3 3 3 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_19102_length_1010_cov_214.001026_g14592_i0forward_frame_3 - 4.1e-05 23.8 0.1 0.0035 17.6 0.0 2.5 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 NODE_19102_length_1010_cov_214.001026_g14592_i0forward_frame_3 - 0.0003 19.9 0.2 0.011 14.7 0.0 2.5 2 1 1 3 3 3 1 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40 PF00400.32 NODE_19102_length_1010_cov_214.001026_g14592_i0forward_frame_2 - 0.0035 18.2 0.0 0.012 16.4 0.0 1.9 2 0 0 2 2 2 1 WD domain, G-beta repeat Tn7_Tnp_TnsA_N PF08722.11 NODE_19102_length_1010_cov_214.001026_g14592_i0forward_frame_2 - 0.077 13.2 0.1 0.15 12.3 0.1 1.5 1 0 0 1 1 1 0 TnsA endonuclease N terminal DUF1295 PF06966.12 NODE_19043_length_1011_cov_920.801230_g12456_i2forward_frame_2 - 2.5e-43 148.3 9.4 7.1e-41 140.3 9.4 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 NODE_19043_length_1011_cov_920.801230_g12456_i2forward_frame_2 - 1.1e-07 32.0 0.5 1.1e-07 32.0 0.5 2.2 2 2 1 3 3 3 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 NODE_19043_length_1011_cov_920.801230_g12456_i2forward_frame_2 - 7.6e-05 23.1 0.3 0.00029 21.2 0.3 2.1 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 NODE_19043_length_1011_cov_920.801230_g12456_i2forward_frame_2 - 0.00059 20.2 2.6 0.001 19.5 0.2 2.4 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF996 PF06195.13 NODE_19043_length_1011_cov_920.801230_g12456_i2forward_frame_2 - 1.9 8.8 10.9 0.081 13.2 1.8 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF996) Pribosyltran_N PF13793.6 ORF97996 - 1e-18 67.4 0.0 1.4e-17 63.7 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 ORF97996 - 3.4e-09 37.0 0.1 7.7e-09 35.8 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 ORF97996 - 4.9e-06 26.1 0.0 1.6e-05 24.5 0.0 1.8 1 1 0 1 1 1 1 Phosphoribosyl transferase domain AP_endonuc_2 PF01261.24 ORF97996 - 0.08 12.4 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel PRTase_2 PF15609.6 ORF97996 - 0.09 12.3 0.0 0.3 10.5 0.0 1.8 2 0 0 2 2 2 0 Phosphoribosyl transferase TMEM154 PF15102.6 ORF94562 - 3.5e-06 27.0 3.7 1.9e-05 24.6 0.2 2.6 2 1 0 2 2 2 1 TMEM154 protein family Podoplanin PF05808.11 ORF94562 - 8.2e-05 22.8 6.3 0.00025 21.2 6.4 1.9 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF94562 - 0.00035 20.0 0.5 0.00035 20.0 0.5 2.1 2 1 0 2 2 2 1 Family of unknown function (DUF5305) Rax2 PF12768.7 ORF94562 - 0.00052 19.5 12.4 0.00053 19.5 8.0 2.5 2 1 0 2 2 2 1 Cortical protein marker for cell polarity EphA2_TM PF14575.6 ORF94562 - 0.0032 18.3 0.1 0.038 14.9 0.0 2.4 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain MtrF PF09472.10 ORF94562 - 0.012 15.0 0.7 0.032 13.6 0.7 1.8 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Amnionless PF14828.6 ORF94562 - 0.014 14.2 0.0 0.023 13.6 0.0 1.3 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 ORF94562 - 0.027 15.1 4.4 0.055 14.1 1.1 2.6 1 1 1 2 2 2 0 Small Novel Rich in Cartilage Yip1 PF04893.17 ORF94562 - 0.05 13.3 0.0 0.098 12.4 0.0 1.5 1 0 0 1 1 1 0 Yip1 domain Protocadherin PF08374.11 ORF94562 - 0.065 13.2 0.1 0.065 13.2 0.1 2.1 2 1 0 2 2 2 0 Protocadherin FixQ PF05545.11 ORF94562 - 0.067 13.2 0.2 0.24 11.4 0.2 1.9 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Syndecan PF01034.20 ORF94562 - 0.1 12.6 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Syndecan domain MscL PF01741.18 ORF94562 - 0.1 12.9 0.1 0.21 11.9 0.1 1.5 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL Adeno_E3_CR2 PF02439.15 ORF94562 - 0.13 12.0 2.5 0.23 11.3 2.5 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 RIFIN PF02009.16 ORF94562 - 0.3 11.0 2.1 0.79 9.6 2.1 1.8 1 1 0 1 1 1 0 Rifin 2OG-FeII_Oxy_3 PF13640.6 ORF9234 - 6.6e-10 39.8 0.1 1.7e-09 38.4 0.0 1.7 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily DUF5001 PF16392.5 ORF88087 - 4.7 7.2 8.7 1.9 8.4 2.2 2.5 2 0 0 2 2 2 0 Ig-like domain TMEM154 PF15102.6 ORF85187 - 3.5e-06 27.0 3.7 1.9e-05 24.6 0.2 2.6 2 1 0 2 2 2 1 TMEM154 protein family Podoplanin PF05808.11 ORF85187 - 8.2e-05 22.8 6.3 0.00025 21.2 6.4 1.9 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF85187 - 0.00035 20.0 0.5 0.00035 20.0 0.5 2.1 2 1 0 2 2 2 1 Family of unknown function (DUF5305) Rax2 PF12768.7 ORF85187 - 0.00052 19.5 12.4 0.00053 19.5 8.0 2.5 2 1 0 2 2 2 1 Cortical protein marker for cell polarity EphA2_TM PF14575.6 ORF85187 - 0.0032 18.3 0.1 0.038 14.9 0.0 2.4 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain MtrF PF09472.10 ORF85187 - 0.012 15.0 0.7 0.032 13.6 0.7 1.8 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Amnionless PF14828.6 ORF85187 - 0.014 14.2 0.0 0.023 13.6 0.0 1.3 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 ORF85187 - 0.027 15.1 4.4 0.055 14.1 1.1 2.6 1 1 1 2 2 2 0 Small Novel Rich in Cartilage Yip1 PF04893.17 ORF85187 - 0.05 13.3 0.0 0.098 12.4 0.0 1.5 1 0 0 1 1 1 0 Yip1 domain Protocadherin PF08374.11 ORF85187 - 0.065 13.2 0.1 0.065 13.2 0.1 2.1 2 1 0 2 2 2 0 Protocadherin FixQ PF05545.11 ORF85187 - 0.067 13.2 0.2 0.24 11.4 0.2 1.9 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Syndecan PF01034.20 ORF85187 - 0.1 12.6 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Syndecan domain MscL PF01741.18 ORF85187 - 0.1 12.9 0.1 0.21 11.9 0.1 1.5 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL Adeno_E3_CR2 PF02439.15 ORF85187 - 0.13 12.0 2.5 0.23 11.3 2.5 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 RIFIN PF02009.16 ORF85187 - 0.3 11.0 2.1 0.79 9.6 2.1 1.8 1 1 0 1 1 1 0 Rifin RPAP3_C PF13877.6 ORF78405 - 0.0029 18.1 5.3 0.012 16.1 0.6 2.8 1 1 1 2 2 2 1 Potential Monad-binding region of RPAP3 HALZ PF02183.18 ORF78405 - 0.0079 16.4 17.3 0.019 15.2 3.2 4.2 3 1 1 4 4 4 2 Homeobox associated leucine zipper RepA_C PF04796.12 ORF78405 - 0.028 14.4 1.5 0.75 9.8 0.1 2.3 2 0 0 2 2 2 0 Plasmid encoded RepA protein IL32 PF15225.6 ORF78405 - 0.038 14.4 0.0 0.11 12.9 0.0 1.8 1 0 0 1 1 1 0 Interleukin 32 ZapB PF06005.12 ORF78405 - 0.046 14.2 23.3 5.8 7.4 5.8 4.8 3 2 1 4 4 4 0 Cell division protein ZapB DUF16 PF01519.16 ORF78405 - 0.42 11.1 21.2 0.96 10.0 0.9 3.4 2 1 0 3 3 3 0 Protein of unknown function DUF16 YnfE PF17452.2 ORF78405 - 2.2 8.6 7.4 0.25 11.7 0.9 2.6 3 0 0 3 3 3 0 Uncharacterized YnfE-like YabA PF06156.13 ORF78405 - 2.6 8.8 24.5 0.2 12.3 3.1 4.3 2 1 1 3 3 3 0 Initiation control protein YabA YtxH PF12732.7 ORF78405 - 2.8 8.5 11.9 22 5.7 0.9 4.3 3 1 0 3 3 3 0 YtxH-like protein DUF1664 PF07889.12 ORF78405 - 2.9 8.0 11.4 0.51 10.4 1.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.12 ORF78405 - 8.7 6.4 17.1 0.56 10.3 5.2 3.2 4 0 0 4 4 4 0 TPR/MLP1/MLP2-like protein MFS_1 PF07690.16 ORF77749 - 0.00013 21.0 23.2 0.00013 21.0 23.2 2.4 1 1 1 2 2 2 1 Major Facilitator Superfamily Brix PF04427.18 ORF76993 - 5e-29 101.8 0.1 5e-29 101.8 0.1 1.5 2 0 0 2 2 2 1 Brix domain Sin_N PF04801.13 ORF76993 - 0.095 11.9 6.8 0.15 11.2 6.8 1.2 1 0 0 1 1 1 0 Sin-like protein conserved region RNA_pol_3_Rpc31 PF11705.8 ORF76993 - 0.17 12.1 8.6 0.25 11.6 8.6 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 RPAP3_C PF13877.6 ORF73912 - 0.0029 18.1 5.3 0.012 16.1 0.6 2.8 1 1 1 2 2 2 1 Potential Monad-binding region of RPAP3 HALZ PF02183.18 ORF73912 - 0.0079 16.4 17.3 0.019 15.2 3.2 4.2 3 1 1 4 4 4 2 Homeobox associated leucine zipper RepA_C PF04796.12 ORF73912 - 0.028 14.4 1.5 0.75 9.8 0.1 2.3 2 0 0 2 2 2 0 Plasmid encoded RepA protein IL32 PF15225.6 ORF73912 - 0.038 14.4 0.0 0.11 12.9 0.0 1.8 1 0 0 1 1 1 0 Interleukin 32 ZapB PF06005.12 ORF73912 - 0.046 14.2 23.3 5.8 7.4 5.8 4.8 3 2 1 4 4 4 0 Cell division protein ZapB DUF16 PF01519.16 ORF73912 - 0.42 11.1 21.2 0.96 10.0 0.9 3.4 2 1 0 3 3 3 0 Protein of unknown function DUF16 YnfE PF17452.2 ORF73912 - 2.2 8.6 7.4 0.25 11.7 0.9 2.6 3 0 0 3 3 3 0 Uncharacterized YnfE-like YabA PF06156.13 ORF73912 - 2.6 8.8 24.5 0.2 12.3 3.1 4.3 2 1 1 3 3 3 0 Initiation control protein YabA YtxH PF12732.7 ORF73912 - 2.8 8.5 11.9 22 5.7 0.9 4.3 3 1 0 3 3 3 0 YtxH-like protein DUF1664 PF07889.12 ORF73912 - 2.9 8.0 11.4 0.51 10.4 1.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.12 ORF73912 - 8.7 6.4 17.1 0.56 10.3 5.2 3.2 4 0 0 4 4 4 0 TPR/MLP1/MLP2-like protein EF-hand_7 PF13499.6 ORF72777 - 6.3e-13 49.0 0.6 2.3e-07 31.2 0.0 3.4 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF72777 - 7.8e-10 37.9 1.3 0.12 12.4 0.1 4.6 4 0 0 4 4 4 4 EF-hand domain EF-hand_1 PF00036.32 ORF72777 - 2.6e-08 32.8 2.6 0.14 11.7 0.1 4.1 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF72777 - 6e-08 32.4 0.7 3.6e-05 23.5 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF72777 - 0.048 14.0 0.1 22 5.4 0.0 2.9 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region IBR PF01485.21 ORF72700 - 9.6e-10 38.6 26.6 1.2e-07 31.9 14.4 2.4 2 0 0 2 2 2 2 IBR domain, a half RING-finger domain IBR PF01485.21 ORF6732 - 9.7e-10 38.5 26.6 1.2e-07 31.9 14.4 2.4 2 0 0 2 2 2 2 IBR domain, a half RING-finger domain PX PF00787.24 ORF65575 - 8.5e-09 35.4 1.0 1.1e-08 35.0 0.2 1.7 2 0 0 2 2 2 1 PX domain DUF2151 PF10221.9 ORF65575 - 0.93 8.0 10.6 0.54 8.8 8.9 1.4 1 1 0 1 1 1 0 Cell cycle and development regulator Bestrophin PF01062.21 ORF63452 - 3.8e-26 92.2 0.1 4.5e-26 91.9 0.1 1.0 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Lipocalin_2 PF08212.12 ORF61798 - 2.4e-05 24.3 0.0 0.051 13.5 0.0 2.5 2 0 0 2 2 2 2 Lipocalin-like domain Transp_Tc5_C PF04236.15 ORF61798 - 0.042 14.2 0.4 0.11 12.9 0.4 1.7 1 0 0 1 1 1 0 Tc5 transposase C-terminal domain Lipocalin PF00061.23 ORF61798 - 0.12 12.5 0.2 0.49 10.6 0.0 2.1 3 0 0 3 3 3 0 Lipocalin / cytosolic fatty-acid binding protein family TMEM154 PF15102.6 ORF54698 - 3.5e-06 27.0 3.7 1.9e-05 24.6 0.2 2.6 2 1 0 2 2 2 1 TMEM154 protein family Podoplanin PF05808.11 ORF54698 - 8.2e-05 22.8 6.3 0.00025 21.2 6.4 1.9 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF54698 - 0.00035 20.0 0.5 0.00035 20.0 0.5 2.1 2 1 0 2 2 2 1 Family of unknown function (DUF5305) Rax2 PF12768.7 ORF54698 - 0.00052 19.5 12.4 0.00053 19.5 8.0 2.5 2 1 0 2 2 2 1 Cortical protein marker for cell polarity EphA2_TM PF14575.6 ORF54698 - 0.0032 18.3 0.1 0.038 14.9 0.0 2.4 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain MtrF PF09472.10 ORF54698 - 0.012 15.0 0.7 0.032 13.6 0.7 1.8 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Amnionless PF14828.6 ORF54698 - 0.014 14.2 0.0 0.023 13.6 0.0 1.3 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 ORF54698 - 0.027 15.1 4.4 0.055 14.1 1.1 2.6 1 1 1 2 2 2 0 Small Novel Rich in Cartilage Yip1 PF04893.17 ORF54698 - 0.05 13.3 0.0 0.098 12.4 0.0 1.5 1 0 0 1 1 1 0 Yip1 domain Protocadherin PF08374.11 ORF54698 - 0.065 13.2 0.1 0.065 13.2 0.1 2.1 2 1 0 2 2 2 0 Protocadherin FixQ PF05545.11 ORF54698 - 0.067 13.2 0.2 0.24 11.4 0.2 1.9 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Syndecan PF01034.20 ORF54698 - 0.1 12.6 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Syndecan domain MscL PF01741.18 ORF54698 - 0.1 12.9 0.1 0.21 11.9 0.1 1.5 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL Adeno_E3_CR2 PF02439.15 ORF54698 - 0.13 12.0 2.5 0.23 11.3 2.5 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 RIFIN PF02009.16 ORF54698 - 0.3 11.0 2.1 0.79 9.6 2.1 1.8 1 1 0 1 1 1 0 Rifin GMC_oxred_C PF05199.13 ORF54144 - 1.5e-42 145.6 0.0 2.2e-42 145.0 0.0 1.3 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_N PF00732.19 ORF54144 - 2.5e-27 96.0 0.0 6.1e-27 94.8 0.0 1.6 2 0 0 2 2 2 1 GMC oxidoreductase DUF1018 PF06252.12 ORF46441 - 9.1e-05 23.4 0.4 5.6 8.0 0.0 3.5 3 0 0 3 3 3 3 Protein of unknown function (DUF1018) DUF4322 PF14210.6 ORF46441 - 0.0021 17.9 0.0 7.1 6.6 0.0 3.4 3 0 0 3 3 3 2 Domain of unknown function (DUF4322) TCL1_MTCP1 PF01840.17 ORF46441 - 0.0052 16.4 0.6 0.4 10.3 0.0 2.7 3 0 0 3 3 3 1 TCL1/MTCP1 family Ribosomal_L37 PF08561.10 ORF46441 - 0.0096 16.4 0.8 0.3 11.6 0.1 2.6 2 1 0 2 2 2 1 Mitochondrial ribosomal protein L37 DUF4378 PF14309.6 ORF45612 - 3.8e-10 40.4 0.2 7.9e-10 39.4 0.1 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4378) GATase_6 PF13522.6 ORF45612 - 0.036 14.2 0.0 3.3 7.9 0.0 2.3 2 0 0 2 2 2 0 Glutamine amidotransferase domain YqgF PF14639.6 ORF45612 - 0.53 10.0 2.4 0.55 10.0 0.1 2.2 3 0 0 3 3 3 0 Holliday-junction resolvase-like of SPT6 TPR_19 PF14559.6 ORF41202 - 3e-06 27.6 1.7 0.00023 21.6 0.6 3.9 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF41202 - 0.00018 21.4 0.7 0.25 11.5 0.0 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF41202 - 0.00071 19.3 5.9 0.36 10.7 0.0 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat SusD-like_3 PF14322.6 ORF41202 - 0.0022 18.4 1.2 0.0022 18.4 1.2 2.2 1 1 1 2 2 2 1 Starch-binding associating with outer membrane TPR_6 PF13174.6 ORF41202 - 0.013 16.1 0.7 17 6.3 0.0 4.8 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF41202 - 0.017 15.3 8.1 0.095 13.0 0.1 4.7 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF41202 - 0.021 15.6 0.0 2 9.5 0.0 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF41202 - 0.14 12.4 9.9 0.14 12.4 4.0 3.5 4 1 0 4 4 4 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 ORF41202 - 0.46 11.0 4.0 15 6.3 0.0 3.8 4 1 0 4 4 4 0 Tetratricopeptide repeat Plus-3 PF03126.18 ORF41168 - 0.037 14.5 0.4 0.14 12.7 0.0 2.2 2 0 0 2 2 2 0 Plus-3 domain ACPS PF01648.20 ORF41168 - 0.096 12.8 0.4 0.3 11.2 0.4 1.8 1 0 0 1 1 1 0 4'-phosphopantetheinyl transferase superfamily zf-GRF PF06839.12 ORF38107 - 2.3e-13 50.0 3.5 3.8e-13 49.3 3.5 1.3 1 0 0 1 1 1 1 GRF zinc finger PLDc_2 PF13091.6 ORF38107 - 4.1e-07 30.0 0.0 7.3e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 PLD-like domain Voltage_CLC PF00654.20 ORF28600 - 1.1e-31 110.4 7.2 1.5e-31 110.0 7.2 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel CBS PF00571.28 ORF28600 - 7.3e-14 52.0 0.1 5.3e-06 26.8 0.0 2.4 2 0 0 2 2 2 2 CBS domain Peptidase_M24 PF00557.24 ORF28509 - 4.5e-44 150.7 0.0 5.3e-44 150.4 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Peptidase_M24_C PF16188.5 ORF28509 - 1.9e-19 69.5 1.2 3.7e-19 68.5 1.2 1.5 1 0 0 1 1 1 1 C-terminal region of peptidase_M24 SET PF00856.28 ORF26456 - 1.2e-11 45.3 0.5 2.7e-09 37.6 0.0 2.2 2 0 0 2 2 2 1 SET domain DUF1682 PF07946.14 ORF26456 - 4.4 6.4 17.5 6.6 5.8 17.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) SH3_3 PF08239.11 ORF15920 - 1.6e-07 31.5 3.4 0.0055 17.0 0.8 2.8 3 0 0 3 3 3 2 Bacterial SH3 domain Ank_4 PF13637.6 ORF15920 - 1.2e-05 25.7 0.0 0.0036 17.9 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF15920 - 7.1e-05 23.3 0.0 0.00038 21.0 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF15920 - 0.0058 16.9 0.1 0.45 10.9 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF15920 - 0.067 13.8 0.3 1.1 10.0 0.0 3.0 3 0 0 3 3 3 0 Ankyrin repeat SH3_4 PF06347.13 ORF15920 - 0.072 12.9 2.5 0.17 11.7 0.5 2.7 2 0 0 2 2 2 0 Bacterial SH3 domain DUF1204 PF06721.11 ORF15920 - 0.085 12.3 0.1 0.13 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1204) TMEM154 PF15102.6 ORF111342 - 4.5e-06 26.6 4.1 2e-05 24.5 0.2 2.6 2 1 0 2 2 2 1 TMEM154 protein family Podoplanin PF05808.11 ORF111342 - 8.3e-05 22.7 6.3 0.00025 21.2 6.4 1.9 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF111342 - 0.00035 20.0 0.5 0.00035 20.0 0.5 2.1 2 1 0 2 2 2 1 Family of unknown function (DUF5305) Rax2 PF12768.7 ORF111342 - 0.00052 19.5 12.4 0.00053 19.5 8.0 2.5 2 1 0 2 2 2 1 Cortical protein marker for cell polarity EphA2_TM PF14575.6 ORF111342 - 0.0029 18.4 0.1 0.036 14.9 0.0 2.4 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain MtrF PF09472.10 ORF111342 - 0.012 15.0 0.7 0.032 13.6 0.7 1.8 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Amnionless PF14828.6 ORF111342 - 0.014 14.2 0.0 0.022 13.6 0.0 1.3 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 ORF111342 - 0.027 15.0 4.4 0.055 14.1 1.1 2.6 1 1 1 2 2 2 0 Small Novel Rich in Cartilage Yip1 PF04893.17 ORF111342 - 0.05 13.3 0.0 0.098 12.4 0.0 1.5 1 0 0 1 1 1 0 Yip1 domain FixQ PF05545.11 ORF111342 - 0.067 13.2 0.2 0.24 11.4 0.2 1.9 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Protocadherin PF08374.11 ORF111342 - 0.082 12.9 0.1 0.082 12.9 0.1 2.1 2 1 0 2 2 2 0 Protocadherin Syndecan PF01034.20 ORF111342 - 0.1 12.6 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Syndecan domain MscL PF01741.18 ORF111342 - 0.1 12.9 0.1 0.22 11.8 0.1 1.5 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL DUF5385 PF17359.2 ORF111342 - 0.11 12.1 0.1 0.17 11.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Adeno_E3_CR2 PF02439.15 ORF111342 - 0.13 12.0 2.5 0.23 11.3 2.5 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 RIFIN PF02009.16 ORF111342 - 0.3 10.9 2.1 0.79 9.6 2.1 1.8 1 1 0 1 1 1 0 Rifin Glyco_transf_24 PF18404.1 ORF104424 - 3.1e-124 413.7 4.5 1.2e-62 211.8 0.6 2.0 1 1 0 2 2 2 2 Glucosyltransferase 24 Glyco_transf_8 PF01501.20 ORF104424 - 7.5e-10 38.8 0.0 1.4e-09 37.9 0.0 1.3 1 1 0 1 1 1 1 Glycosyl transferase family 8 p450 PF00067.22 ORF102441 - 1.5e-12 47.0 0.6 1.9e-12 46.7 0.6 1.1 1 0 0 1 1 1 1 Cytochrome P450 ENTH PF01417.20 ORF102441 - 0.042 13.9 0.0 0.094 12.8 0.0 1.8 1 1 0 1 1 1 0 ENTH domain TMEM164 PF14808.6 NODE_19316_length_1003_cov_728.421488_g14764_i0forward_frame_1 - 2.4e-27 95.9 8.5 3e-27 95.6 8.5 1.1 1 0 0 1 1 1 1 TMEM164 family DUF4668 PF15701.5 NODE_19316_length_1003_cov_728.421488_g14764_i0forward_frame_1 - 0.62 9.9 7.2 2.1 8.1 5.6 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4668) HK_sensor PF16750.5 NODE_19253_length_1006_cov_66.603502_g14717_i0forward_frame_3 - 0.083 13.2 0.1 0.18 12.1 0.1 1.5 1 0 0 1 1 1 0 Sensor domain of 2-component histidine kinase DUF1295 PF06966.12 NODE_19222_length_1006_cov_925.542739_g12456_i3forward_frame_2 - 2.5e-43 148.3 9.4 7e-41 140.3 9.4 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 NODE_19222_length_1006_cov_925.542739_g12456_i3forward_frame_2 - 1.1e-07 32.0 0.5 1.1e-07 32.0 0.5 2.2 2 2 1 3 3 3 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 NODE_19222_length_1006_cov_925.542739_g12456_i3forward_frame_2 - 7.6e-05 23.1 0.3 0.00029 21.2 0.3 2.1 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 NODE_19222_length_1006_cov_925.542739_g12456_i3forward_frame_2 - 0.00058 20.2 2.6 0.001 19.5 0.2 2.4 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF996 PF06195.13 NODE_19222_length_1006_cov_925.542739_g12456_i3forward_frame_2 - 1.8 8.8 10.9 0.08 13.2 1.8 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF996) MtrB PF05440.12 NODE_19213_length_1007_cov_34.578189_g14683_i0reverse_frame_3 - 0.077 13.4 0.6 7.1 7.1 0.0 2.8 2 1 1 3 3 3 0 Tetrahydromethanopterin S-methyltransferase subunit B JIP_LZII PF16471.5 NODE_19213_length_1007_cov_34.578189_g14683_i0reverse_frame_3 - 0.32 11.2 0.2 0.32 11.2 0.2 2.7 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II DUF3450 PF11932.8 NODE_19213_length_1007_cov_34.578189_g14683_i0reverse_frame_3 - 6.9 5.9 10.8 2.7 7.2 1.9 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3450) JmjC PF02373.22 NODE_19197_length_1007_cov_261.268519_g14668_i0forward_frame_3 - 3.9e-40 136.8 1.3 2.4e-39 134.3 0.5 2.3 2 0 0 2 2 2 1 JmjC domain, hydroxylase RRM_1 PF00076.22 ORF98364 - 1.2e-08 34.6 0.1 7.2e-08 32.1 0.0 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Sec23_trunk PF04811.15 ORF97217 - 3.9e-05 23.3 0.0 0.00011 21.9 0.0 1.8 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 ORF97217 - 0.00064 20.4 0.0 0.0013 19.4 0.0 1.6 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain ARID PF01388.21 ORF97217 - 0.019 15.6 0.0 0.067 13.9 0.0 1.9 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain Usher PF00577.20 ORF97121 - 3.2e-50 171.5 10.0 3.7e-50 171.3 10.0 1.0 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF97121 - 1.7e-09 37.4 0.0 4.2e-09 36.1 0.0 1.7 1 0 0 1 1 1 1 PapC C-terminal domain DUF996 PF06195.13 ORF92661 - 0.01 16.1 5.9 0.12 12.7 0.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF996) DUF2207 PF09972.9 ORF92661 - 0.05 12.4 6.9 3.4 6.3 7.1 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Oxidored_q3 PF00499.20 ORF92661 - 0.1 12.3 4.5 0.59 9.8 5.5 1.6 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PAP2_3 PF14378.6 ORF92661 - 0.24 11.1 2.8 1.3 8.7 0.1 2.1 1 1 1 2 2 2 0 PAP2 superfamily Sigma_reg_N PF13800.6 ORF92661 - 0.72 10.2 7.6 0.1 12.9 1.4 2.8 1 1 3 4 4 4 0 Sigma factor regulator N-terminal AgrB PF04647.15 ORF92661 - 1.1 8.6 13.6 0.074 12.3 5.8 2.4 1 1 2 3 3 3 0 Accessory gene regulator B Sec23_trunk PF04811.15 ORF87000 - 3.9e-05 23.3 0.0 0.00011 21.9 0.0 1.8 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 ORF87000 - 0.00064 20.4 0.0 0.0013 19.4 0.0 1.6 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain ARID PF01388.21 ORF87000 - 0.019 15.6 0.0 0.067 13.9 0.0 1.9 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain PmbA_TldD PF01523.16 ORF81535 - 0.088 12.6 3.1 0.13 12.1 3.1 1.3 1 0 0 1 1 1 0 Putative modulator of DNA gyrase 6PGD PF00393.19 ORF81535 - 0.35 10.2 4.0 0.53 9.6 3.8 1.5 1 1 0 1 1 1 0 6-phosphogluconate dehydrogenase, C-terminal domain MCM_bind PF09739.9 ORF81535 - 0.85 8.0 10.5 1.1 7.6 10.5 1.3 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor GREB1 PF15782.5 ORF81535 - 6.3 3.8 14.7 7.9 3.5 14.7 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer ArAE_2_N PF10337.9 ORF81535 - 8 5.4 7.9 3.7 6.5 5.8 1.5 1 1 1 2 2 2 0 Putative ER transporter, 6TM, N-terminal FUSC PF04632.12 ORF81535 - 10 4.5 8.5 12 4.3 8.5 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family S1 PF00575.23 ORF7657 - 1.8e-05 25.0 0.0 0.023 15.1 0.0 2.4 2 0 0 2 2 2 2 S1 RNA binding domain AFT PF08731.11 ORF7657 - 0.16 12.4 0.0 0.25 11.8 0.0 1.3 1 0 0 1 1 1 0 Transcription factor AFT Peptidase_C26 PF07722.13 ORF66386 - 5.8e-21 75.2 0.0 1.4e-20 74.0 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF66386 - 4.1e-11 43.0 0.0 9.5e-11 41.8 0.0 1.6 1 1 0 1 1 1 1 Glutamine amidotransferase class-I BAR_3_WASP_bdg PF10456.9 ORF66386 - 0.029 13.8 0.1 0.063 12.7 0.1 1.5 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein IU_nuc_hydro PF01156.19 ORF65770 - 2e-21 76.9 0.0 2.4e-21 76.6 0.0 1.2 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase YMF19 PF02326.15 ORF61473 - 0.02 15.6 0.5 0.053 14.3 0.5 1.8 1 1 0 1 1 1 0 Plant ATP synthase F0 Bac_luciferase PF00296.20 ORF6074 - 1.9e-36 126.1 0.4 2.1e-35 122.7 0.4 1.9 1 1 0 1 1 1 1 Luciferase-like monooxygenase Atg14 PF10186.9 ORF60579 - 0.21 10.6 18.9 0.23 10.5 5.8 2.4 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Golgin_A5 PF09787.9 ORF60579 - 3.1 7.2 31.7 0.03 13.8 12.0 2.6 1 1 0 2 2 2 0 Golgin subfamily A member 5 JIP_LZII PF16471.5 ORF60579 - 3.8 7.7 17.7 1 9.6 0.9 4.0 4 0 0 4 4 4 0 JNK-interacting protein leucine zipper II RRM_1 PF00076.22 ORF54254 - 1.2e-08 34.6 0.1 7.2e-08 32.1 0.0 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Semialdhyde_dhC PF02774.18 ORF48600 - 6e-49 166.6 0.0 9e-49 166.0 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 ORF48600 - 3.8e-32 111.3 0.3 1.7e-31 109.2 0.2 2.1 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain DXP_reductoisom PF02670.16 ORF48600 - 0.001 19.8 0.2 0.58 10.9 0.1 2.7 1 1 1 2 2 2 2 1-deoxy-D-xylulose 5-phosphate reductoisomerase F420_oxidored PF03807.17 ORF48600 - 0.0048 17.5 0.6 0.015 15.9 0.3 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent ROF PF07073.12 ORF48600 - 0.0063 16.7 0.3 0.28 11.4 0.0 2.3 2 0 0 2 2 2 1 Modulator of Rho-dependent transcription termination (ROF) DapB_N PF01113.20 ORF48600 - 0.012 15.7 0.2 0.028 14.5 0.2 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 ORF48600 - 0.051 14.4 0.1 0.13 13.1 0.1 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 ORF48600 - 0.053 14.2 0.0 0.14 12.8 0.0 1.6 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF48600 - 0.079 13.2 0.1 0.19 12.0 0.1 1.7 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Gp_dh_C PF02800.20 ORF48600 - 0.09 12.4 0.0 0.21 11.2 0.0 1.6 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ldh_1_N PF00056.23 ORF48600 - 0.1 12.7 0.1 0.24 11.5 0.1 1.7 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain MMR_HSR1_Xtn PF16897.5 ORF37357 - 1.4e-40 137.5 1.3 2.3e-40 136.9 1.3 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 ORF37357 - 7.9e-19 67.8 0.0 2e-18 66.5 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF37357 - 4.5e-10 39.3 0.1 7.6e-10 38.5 0.1 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B BLUF PF04940.12 ORF37357 - 0.05 13.7 0.0 0.099 12.8 0.0 1.5 1 0 0 1 1 1 0 Sensors of blue-light using FAD TGS PF02824.21 ORF37357 - 0.06 13.4 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 TGS domain Dynamin_N PF00350.23 ORF37357 - 0.06 13.4 0.0 3.6 7.6 0.0 2.6 2 0 0 2 2 2 0 Dynamin family EamA PF00892.20 ORF33421 - 5.8e-25 88.1 28.5 1.1e-13 51.5 10.6 2.1 2 0 0 2 2 2 2 EamA-like transporter family HisKA_3 PF07730.13 ORF33142 - 0.57 10.7 6.7 4 8.0 0.2 3.5 3 1 0 3 3 3 0 Histidine kinase Lactamase_B PF00753.27 ORF31976 - 4e-15 56.3 1.4 5e-14 52.8 1.4 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 ORF31976 - 0.00029 20.4 0.0 0.005 16.4 0.0 2.2 2 0 0 2 2 2 1 Beta-lactamase superfamily domain BLACT_WH PF17778.1 ORF31976 - 0.11 12.5 0.0 0.32 11.0 0.0 1.8 2 0 0 2 2 2 0 Beta-lactamase associated winged helix domain BPD_transp_1 PF00528.22 ORF18540 - 5.9e-21 75.0 23.8 5.9e-21 75.0 23.8 2.2 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Phage_holin_2_4 PF16082.5 ORF18540 - 4.6 7.0 8.2 0.51 10.1 0.2 2.8 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like TRAUB PF08164.12 ORF13009 - 1.8e-17 63.6 0.1 4e-17 62.5 0.1 1.7 1 0 0 1 1 1 1 Apoptosis-antagonizing transcription factor, C-terminal AATF-Che1 PF13339.6 ORF13009 - 1.4e-10 42.0 0.2 7.9e-10 39.6 0.2 2.2 1 1 0 1 1 1 1 Apoptosis antagonizing transcription factor DNA_pol3_delta2 PF13177.6 ORF13009 - 0.062 13.1 0.0 0.072 12.9 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Methyltransf_24 PF13578.6 ORF12401 - 6.7e-11 43.2 0.0 1.8e-10 41.8 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Phage_holin_2_4 PF16082.5 ORF107648 - 0.025 14.3 1.2 0.27 11.0 0.5 2.8 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Cyd_oper_YbgE PF09600.10 ORF107648 - 0.034 14.5 0.7 0.073 13.4 0.7 1.5 1 0 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) DUF4381 PF14316.6 ORF107648 - 0.17 12.1 0.1 0.31 11.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Podoplanin PF05808.11 ORF107648 - 0.18 11.9 0.1 0.18 11.9 0.1 2.1 3 0 0 3 3 3 0 Podoplanin SecE PF00584.20 ORF107648 - 0.76 9.8 3.2 1.6 8.7 3.2 1.5 1 0 0 1 1 1 0 SecE/Sec61-gamma subunits of protein translocation complex DUF4083 PF13314.6 ORF107648 - 3.1 7.8 10.0 0.25 11.3 4.6 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4083) Glycophorin_A PF01102.18 ORF107648 - 3.4 7.9 6.1 0.99 9.7 2.1 2.1 2 1 0 2 2 2 0 Glycophorin A Actin PF00022.19 ORF106930 - 1e-126 422.9 0.0 3.7e-126 421.0 0.0 1.7 1 1 0 1 1 1 1 Actin S1 PF00575.23 ORF102280 - 1.8e-05 25.0 0.0 0.023 15.1 0.0 2.4 2 0 0 2 2 2 2 S1 RNA binding domain AFT PF08731.11 ORF102280 - 0.16 12.4 0.0 0.25 11.8 0.0 1.3 1 0 0 1 1 1 0 Transcription factor AFT UspA1_rep PF18792.1 ORF100339 - 0.056 13.9 2.5 0.19 12.3 2.5 2.0 1 0 0 1 1 1 0 Ubiquitous surface protein adhesin repeat CENP-N PF05238.13 ORF100339 - 0.14 11.4 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like DUF2358 PF10184.9 NODE_19433_length_1000_cov_82.338860_g14857_i0forward_frame_1 - 0.064 13.5 0.8 0.27 11.5 0.1 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2358) TMEM164 PF14808.6 NODE_19418_length_1000_cov_730.675648_g14764_i1reverse_frame_1 - 2.3e-27 96.0 8.5 3e-27 95.6 8.5 1.1 1 0 0 1 1 1 1 TMEM164 family DUF4668 PF15701.5 NODE_19418_length_1000_cov_730.675648_g14764_i1reverse_frame_1 - 0.57 10.0 7.1 2.1 8.2 5.5 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4668) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks41.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks41.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks41.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks41.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:23:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2312 PF10073.9 NODE_88879_length_181_cov_1.904110_g80938_i0forward_frame_2 - 0.024 14.3 0.4 0.042 13.5 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) Lipoxygenase PF00305.19 NODE_88877_length_181_cov_1.910959_g80936_i0forward_frame_3 - 0.052 12.0 0.9 0.061 11.7 0.9 1.0 1 0 0 1 1 1 0 Lipoxygenase DUF5541 PF17695.1 NODE_88875_length_181_cov_1.910959_g80934_i0forward_frame_3 - 0.044 14.2 0.0 0.045 14.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5541) cNMP_binding PF00027.29 NODE_88874_length_181_cov_1.917808_g80933_i0reverse_frame_3 - 5.9e-05 23.1 0.0 7.6e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Baculo_FP PF03258.14 NODE_88874_length_181_cov_1.917808_g80933_i0reverse_frame_3 - 0.044 13.9 0.5 0.055 13.6 0.5 1.2 1 0 0 1 1 1 0 Baculovirus FP protein HD_5 PF13487.6 NODE_88873_length_181_cov_1.917808_g80932_i0reverse_frame_3 - 0.091 13.0 0.1 0.13 12.5 0.1 1.2 1 0 0 1 1 1 0 HD domain DUF5345 PF17280.2 NODE_88868_length_181_cov_1.938356_g80927_i0forward_frame_3 - 0.055 13.4 0.7 0.064 13.2 0.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5345) COE1_DBD PF16422.5 NODE_88864_length_181_cov_1.972603_g80923_i0reverse_frame_2 - 0.26 10.7 0.9 0.93 8.9 0.9 1.8 1 1 0 1 1 1 0 Transcription factor COE1 DNA-binding domain cNMP_binding PF00027.29 NODE_88861_length_181_cov_2.020548_g80920_i0forward_frame_3 - 0.00056 19.9 0.0 0.00071 19.6 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain NCD3G PF07562.14 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 0.057 13.4 1.7 0.057 13.4 1.7 1.4 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR Ephrin_rec_like PF07699.13 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 0.062 13.1 9.0 0.1 12.4 9.0 1.4 1 0 0 1 1 1 0 Putative ephrin-receptor like ATP-synt_I PF03899.15 NODE_88846_length_181_cov_2.171233_g80905_i0forward_frame_3 - 2.2e-05 24.7 3.8 2.3e-05 24.7 3.8 1.0 1 0 0 1 1 1 1 ATP synthase I chain Chordopox_A13L PF05961.11 NODE_88845_length_181_cov_2.178082_g80904_i0reverse_frame_2 - 0.46 10.8 5.2 0.15 12.3 1.9 1.7 1 1 1 2 2 2 0 Chordopoxvirus A13L protein Fig1 PF12351.8 NODE_88845_length_181_cov_2.178082_g80904_i0forward_frame_2 - 5.4 6.9 7.3 6.8 6.6 7.3 1.3 1 1 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 TMEM154 PF15102.6 NODE_88843_length_181_cov_2.191781_g80902_i0reverse_frame_3 - 1.3 8.9 9.6 1.5 8.7 9.6 1.3 1 0 0 1 1 1 0 TMEM154 protein family MGC-24 PF05283.11 NODE_88843_length_181_cov_2.191781_g80902_i0reverse_frame_3 - 5.8 7.4 17.9 6.2 7.3 17.9 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF922 PF06037.11 NODE_88843_length_181_cov_2.191781_g80902_i0reverse_frame_3 - 7.1 6.4 8.2 7.8 6.3 8.2 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) ODV-E18 PF10717.9 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_2 - 2.6 8.0 4.8 3.1 7.7 4.8 1.1 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Sirohm_synth_M PF14824.6 NODE_88842_length_181_cov_2.191781_g80901_i0forward_frame_3 - 0.094 12.2 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Sirohaem biosynthesis protein central DUF5022 PF16425.5 NODE_88836_length_181_cov_2.226027_g80895_i0reverse_frame_3 - 0.021 14.3 0.0 0.021 14.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5022) Filament_head PF04732.14 NODE_88833_length_181_cov_2.273973_g80892_i0forward_frame_3 - 0.17 12.8 0.0 0.25 12.3 0.0 1.2 1 0 0 1 1 1 0 Intermediate filament head (DNA binding) region ChapFlgA PF13144.6 NODE_88815_length_181_cov_2.458904_g80874_i0reverse_frame_3 - 0.0013 18.8 0.0 0.0014 18.7 0.0 1.0 1 0 0 1 1 1 1 Chaperone for flagella basal body P-ring formation DEAD_2 PF06733.15 NODE_88815_length_181_cov_2.458904_g80874_i0reverse_frame_2 - 0.048 13.3 0.3 0.053 13.1 0.3 1.0 1 0 0 1 1 1 0 DEAD_2 zf-C2H2_4 PF13894.6 NODE_88814_length_181_cov_2.465753_g80873_i0forward_frame_2 - 0.23 12.4 5.6 2.2 9.3 1.6 3.4 2 2 0 2 2 2 0 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_88814_length_181_cov_2.465753_g80873_i0forward_frame_2 - 0.41 11.2 6.5 1.8 9.2 1.9 2.9 2 2 0 2 2 2 0 Zinc finger, C2H2 type Peptidase_S64 PF08192.11 NODE_88806_length_181_cov_2.623288_g80865_i0reverse_frame_3 - 0.017 13.6 0.1 0.02 13.4 0.1 1.0 1 0 0 1 1 1 0 Peptidase family S64 Lip_A_acyltrans PF03279.13 NODE_88806_length_181_cov_2.623288_g80865_i0reverse_frame_3 - 0.035 13.3 0.0 0.035 13.3 0.0 1.0 1 0 0 1 1 1 0 Bacterial lipid A biosynthesis acyltransferase MYO10_CC PF16735.5 NODE_88802_length_181_cov_2.671233_g80861_i0forward_frame_3 - 0.019 15.0 5.2 0.43 10.7 0.4 2.2 1 1 1 2 2 2 0 Unconventional myosin-X coiled coil domain Ax_dynein_light PF10211.9 NODE_88802_length_181_cov_2.671233_g80861_i0forward_frame_3 - 0.033 14.1 7.6 0.036 14.0 7.6 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain IL17R_D_N PF16742.5 NODE_88795_length_181_cov_2.739726_g80854_i0reverse_frame_3 - 0.022 14.8 0.0 0.024 14.7 0.0 1.1 1 0 0 1 1 1 0 N-terminus of interleukin 17 receptor D ACT_3 PF10000.9 NODE_88795_length_181_cov_2.739726_g80854_i0reverse_frame_2 - 0.072 13.0 0.1 0.095 12.6 0.1 1.2 1 0 0 1 1 1 0 ACT domain Zip PF02535.22 NODE_88795_length_181_cov_2.739726_g80854_i0forward_frame_3 - 1.4e-08 34.3 0.3 1.4e-08 34.3 0.3 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter DUF1179 PF06678.11 NODE_88793_length_181_cov_2.787671_g80852_i0forward_frame_2 - 0.052 13.5 0.0 0.059 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1179) AbiEi_3_N PF17194.4 NODE_88785_length_181_cov_3.102740_g80844_i0forward_frame_3 - 0.1 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin N-terminal domain SWIM PF04434.17 NODE_88781_length_181_cov_3.157534_g80840_i0forward_frame_3 - 0.44 10.3 9.2 4.1 7.2 2.8 2.3 2 0 0 2 2 2 0 SWIM zinc finger YdiH PF15930.5 NODE_88780_length_181_cov_3.184932_g80839_i0forward_frame_3 - 0.13 12.4 0.0 0.26 11.5 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function Pacifastin_I PF05375.13 NODE_88771_length_181_cov_3.568493_g80830_i0forward_frame_3 - 0.084 12.6 3.0 0.13 12.0 3.0 1.2 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) Orthoreo_P10 PF07204.11 NODE_88768_length_181_cov_3.794521_g80827_i0reverse_frame_3 - 0.034 14.1 1.8 0.034 14.1 1.8 1.1 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 FLYWCH PF04500.16 NODE_88768_length_181_cov_3.794521_g80827_i0forward_frame_3 - 0.041 14.0 0.3 0.048 13.8 0.3 1.1 1 0 0 1 1 1 0 FLYWCH zinc finger domain Ribosomal_S24e PF01282.19 NODE_88767_length_181_cov_3.910959_g80826_i0forward_frame_3 - 0.072 13.1 0.0 0.094 12.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S24e SH3_19 PF18597.1 NODE_88761_length_181_cov_7.424658_g80820_i0forward_frame_3 - 0.089 12.6 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Myosin X N-terminal SH3 domain BssB_TutG PF18512.1 NODE_88759_length_181_cov_8.363014_g80818_i0reverse_frame_2 - 0.029 14.2 0.7 0.044 13.7 0.7 1.3 1 0 0 1 1 1 0 Benzylsuccinate synthase beta subunit Pox_Ag35 PF03286.14 NODE_88756_length_181_cov_13.554795_g80815_i0reverse_frame_2 - 0.38 10.5 5.8 0.43 10.4 5.8 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein WCOR413 PF05562.11 NODE_88751_length_181_cov_17.664384_g80810_i0forward_frame_2 - 0.055 13.4 1.5 0.066 13.2 1.5 1.1 1 0 0 1 1 1 0 Cold acclimation protein WCOR413 DUF4131 PF13567.6 NODE_88751_length_181_cov_17.664384_g80810_i0forward_frame_2 - 6.8 6.3 6.9 7.2 6.2 6.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) UXS1_N PF11803.8 NODE_88750_length_181_cov_18.116438_g80809_i0forward_frame_2 - 0.05 14.0 0.0 0.062 13.7 0.0 1.2 1 0 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal DUF4172 PF13776.6 NODE_88748_length_181_cov_18.815068_g80807_i0reverse_frame_3 - 0.0066 16.8 0.1 0.0076 16.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4172) HHH_2 PF12826.7 NODE_88747_length_181_cov_19.815068_g80806_i0forward_frame_2 - 0.11 12.6 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF2628 PF10947.8 NODE_88746_length_181_cov_20.630137_g80805_i0forward_frame_2 - 0.14 12.5 2.4 0.15 12.4 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) YfhO PF09586.10 NODE_88746_length_181_cov_20.630137_g80805_i0forward_frame_2 - 0.58 8.3 6.3 0.6 8.3 6.3 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO SMBP PF16785.5 NODE_88743_length_181_cov_22.232877_g80802_i0forward_frame_3 - 0.0047 17.1 0.0 0.0051 17.0 0.0 1.0 1 0 0 1 1 1 1 Small metal-binding protein GntP_permease PF02447.16 NODE_88740_length_181_cov_23.657534_g80799_i0reverse_frame_3 - 0.047 12.4 5.0 0.052 12.2 5.0 1.0 1 0 0 1 1 1 0 GntP family permease DUF2052 PF09747.9 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 0.072 13.2 15.5 0.074 13.2 15.5 1.0 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) GEN1_C PF18380.1 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 0.28 12.1 11.7 0.33 11.9 11.7 1.1 1 0 0 1 1 1 0 Holliday junction resolvase Gen1 C-terminal domain DUF4611 PF15387.6 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 0.52 10.6 13.9 0.6 10.4 13.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) CobT PF06213.12 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 0.68 9.3 14.9 0.7 9.2 14.9 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT RNA_polI_A34 PF08208.11 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 1.1 9.4 13.9 1.1 9.3 13.9 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Voldacs PF03517.13 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 1.2 9.3 10.4 1.3 9.1 10.4 1.2 1 0 0 1 1 1 0 Regulator of volume decrease after cellular swelling Cnd2 PF05786.14 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 2.6 6.6 13.9 2.9 6.4 13.9 1.0 1 0 0 1 1 1 0 Condensin complex subunit 2 FAM176 PF14851.6 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 2.7 7.6 12.0 2.9 7.5 12.0 1.2 1 0 0 1 1 1 0 FAM176 family FXMRP1_C_core PF12235.8 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_2 - 2.2 9.0 16.1 2.6 8.7 16.1 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal Glyco_hydro_80 PF13647.6 NODE_88727_length_181_cov_30.424658_g80786_i0reverse_frame_3 - 0.11 11.9 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A DUF3335 PF11814.8 NODE_88727_length_181_cov_30.424658_g80786_i0forward_frame_3 - 0.092 12.2 0.1 0.092 12.2 0.1 1.0 1 0 0 1 1 1 0 Peptidase_C39 like family Imm61 PF15598.6 NODE_88723_length_181_cov_32.595890_g80782_i0forward_frame_3 - 0.032 14.1 0.0 0.035 14.0 0.0 1.0 1 0 0 1 1 1 0 Immunity protein 61 Cytochrome_CBB3 PF13442.6 NODE_88720_length_181_cov_35.630137_g80779_i0forward_frame_3 - 3.1 8.2 5.3 2.5 8.5 2.6 1.9 1 1 1 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III DUF2721 PF11026.8 NODE_88716_length_181_cov_39.328767_g80775_i0reverse_frame_3 - 0.07 13.0 0.9 0.08 12.8 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Vma12 PF11712.8 NODE_88716_length_181_cov_39.328767_g80775_i0reverse_frame_3 - 0.25 11.4 0.4 0.28 11.2 0.4 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF1485 PF07364.12 NODE_88716_length_181_cov_39.328767_g80775_i0forward_frame_3 - 0.094 12.0 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase family M81 zf-ISL3 PF14690.6 NODE_88710_length_181_cov_44.671233_g80769_i0reverse_frame_2 - 0.04 14.6 1.3 0.061 14.0 1.3 1.3 1 0 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Helicase_C_2 PF13307.6 NODE_88707_length_181_cov_50.164384_g80766_i0reverse_frame_2 - 0.16 12.1 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Helicase C-terminal domain SAM_4 PF18017.1 NODE_88701_length_181_cov_61.369863_g80760_i0forward_frame_3 - 0.11 12.5 1.0 0.13 12.3 1.0 1.1 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) RRN3 PF05327.11 NODE_88701_length_181_cov_61.369863_g80760_i0forward_frame_2 - 4.3 5.8 7.3 4.5 5.7 7.3 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 AAA_lid_11 PF18198.1 NODE_88698_length_181_cov_65.184932_g80757_i0forward_frame_3 - 0.051 13.4 0.0 0.051 13.4 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain DUF3863 PF12979.7 NODE_88698_length_181_cov_65.184932_g80757_i0forward_frame_3 - 0.082 11.7 0.0 0.083 11.7 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3863) Piezo_RRas_bdg PF12166.8 NODE_88695_length_181_cov_76.095890_g80754_i0forward_frame_3 - 0.24 10.6 2.6 0.26 10.5 2.6 1.0 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain Stealth_CR4 PF17103.5 NODE_88695_length_181_cov_76.095890_g80754_i0forward_frame_2 - 0.064 13.2 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 Stealth protein CR4, conserved region 4 Cadherin_C_2 PF16492.5 NODE_88688_length_181_cov_112.643836_g80747_i0reverse_frame_3 - 0.056 14.2 0.0 0.057 14.2 0.0 1.1 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal MWFE PF15879.5 NODE_88686_length_181_cov_115.739726_g80745_i0reverse_frame_3 - 0.044 14.0 0.2 0.054 13.7 0.2 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit PUMA PF15826.5 NODE_88684_length_181_cov_120.089041_g80743_i0forward_frame_2 - 0.089 13.0 0.3 0.096 12.9 0.3 1.0 1 0 0 1 1 1 0 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis DUF3446 PF11928.8 NODE_88683_length_181_cov_131.643836_g80742_i0forward_frame_2 - 0.11 12.8 8.7 0.12 12.7 8.7 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain Propeptide_C1 PF08127.13 NODE_88680_length_181_cov_148.089041_g80739_i0forward_frame_3 - 0.24 11.3 0.1 0.35 10.8 0.1 1.2 1 0 0 1 1 1 0 Peptidase family C1 propeptide Lantibiotic_a PF14867.6 NODE_88676_length_181_cov_168.349315_g80735_i0forward_frame_2 - 0.0096 15.6 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 Lantibiotic alpha DUF3307 PF11750.8 NODE_88673_length_181_cov_195.808219_g80732_i0forward_frame_3 - 0.084 12.9 0.0 0.095 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3307) WRW PF10206.9 NODE_88673_length_181_cov_195.808219_g80732_i0forward_frame_2 - 0.17 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f DUF5480 PF17576.2 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.0085 16.0 0.0 0.0097 15.9 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5480) DAP10 PF07213.11 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.045 13.7 0.1 0.046 13.7 0.1 1.1 1 0 0 1 1 1 0 DAP10 membrane protein TMEM132D_C PF15706.5 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.078 12.8 0.5 0.086 12.6 0.5 1.1 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TMEM51 PF15345.6 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.11 12.4 0.0 0.11 12.4 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 TMEM154 PF15102.6 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.12 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF4051 PF13260.6 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.12 12.1 0.1 0.16 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) Sulfate_transp PF00916.20 NODE_88663_length_182_cov_0.816327_g80722_i0forward_frame_3 - 0.0002 20.2 0.0 0.00023 20.0 0.0 1.0 1 0 0 1 1 1 1 Sulfate permease family CARD_2 PF16739.5 NODE_88662_length_182_cov_0.816327_g80721_i0forward_frame_2 - 0.099 12.6 0.2 0.17 11.9 0.0 1.4 1 1 1 2 2 2 0 Caspase recruitment domain CCER1 PF15482.6 NODE_88660_length_182_cov_0.816327_g80719_i0forward_frame_3 - 2.8 7.8 5.9 3 7.7 5.9 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 Delta_lysin PF05372.11 NODE_88657_length_182_cov_0.816327_g80716_i0reverse_frame_3 - 0.078 12.3 1.2 0.078 12.3 1.2 1.7 2 0 0 2 2 2 0 Delta lysin family TT_ORF1 PF02956.14 NODE_88647_length_182_cov_0.870748_g80706_i0forward_frame_2 - 5.8 5.5 9.6 5.4 5.6 9.6 1.0 1 0 0 1 1 1 0 TT viral orf 1 Chromosome_seg PF13889.6 NODE_88645_length_182_cov_0.877551_g80704_i0forward_frame_3 - 0.045 13.9 0.1 0.053 13.7 0.1 1.2 1 0 0 1 1 1 0 Chromosome segregation during meiosis Tap-RNA_bind PF09162.10 NODE_88640_length_182_cov_0.911565_g80699_i0forward_frame_2 - 0.038 13.8 0.1 0.064 13.1 0.1 1.4 1 0 0 1 1 1 0 Tap, RNA-binding Fst_toxin PF13955.6 NODE_88632_length_182_cov_1.000000_g80691_i0reverse_frame_3 - 0.007 16.2 0.1 0.017 15.0 0.1 1.7 1 0 0 1 1 1 1 Toxin Fst, type I toxin-antitoxin system DUF2110 PF09883.9 NODE_88632_length_182_cov_1.000000_g80691_i0forward_frame_2 - 0.077 12.6 0.0 0.081 12.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2110) Toxin_3 PF00537.18 NODE_88624_length_182_cov_1.040816_g80683_i0forward_frame_3 - 0.094 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Scorpion toxin-like domain V-ATPase_H_N PF03224.14 NODE_88619_length_182_cov_1.047619_g80678_i0reverse_frame_2 - 0.054 12.8 0.1 0.055 12.8 0.1 1.0 1 0 0 1 1 1 0 V-ATPase subunit H Med3 PF11593.8 NODE_88616_length_182_cov_1.068027_g80675_i0reverse_frame_2 - 0.038 13.2 3.8 0.041 13.1 3.8 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal PDR_assoc PF08370.11 NODE_88616_length_182_cov_1.068027_g80675_i0forward_frame_3 - 0.042 13.6 0.7 0.055 13.2 0.7 1.2 1 0 0 1 1 1 0 Plant PDR ABC transporter associated PAN_2 PF08276.11 NODE_88611_length_182_cov_1.074830_g80670_i0reverse_frame_2 - 0.0049 17.0 0.8 0.0049 17.0 0.8 1.5 1 1 1 2 2 2 1 PAN-like domain TMEM40 PF15817.5 NODE_88608_length_182_cov_1.074830_g80667_i0forward_frame_2 - 0.043 13.6 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 40 family NADH_u_ox_C PF12853.7 NODE_88607_length_182_cov_1.074830_g80666_i0forward_frame_3 - 0.094 12.7 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit SRR1 PF07985.12 NODE_88606_length_182_cov_1.074830_g80665_i0reverse_frame_3 - 4.4 7.4 6.6 3 8.0 3.1 2.0 1 1 1 2 2 2 0 SRR1 RepA1_leader PF08048.12 NODE_88602_length_182_cov_1.081633_g80661_i0reverse_frame_3 - 0.04 14.2 0.1 0.061 13.6 0.1 1.3 1 0 0 1 1 1 0 Tap RepA1 leader peptide TniQ PF06527.11 NODE_88602_length_182_cov_1.081633_g80661_i0reverse_frame_3 - 0.13 13.0 3.4 0.14 12.9 3.4 1.1 1 0 0 1 1 1 0 TniQ zf-C6H2 PF15801.5 NODE_88600_length_182_cov_1.081633_g80659_i0reverse_frame_2 - 0.18 12.1 3.7 0.43 10.9 3.7 1.8 1 1 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding FXa_inhibition PF14670.6 NODE_88599_length_182_cov_1.081633_g80658_i0forward_frame_2 - 0.18 12.1 2.6 0.22 11.8 2.6 1.1 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site HRG PF16954.5 NODE_88598_length_182_cov_1.081633_g80657_i0reverse_frame_3 - 0.046 14.1 1.6 0.083 13.3 1.6 1.5 1 1 0 1 1 1 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene DUF1700 PF08006.11 NODE_88598_length_182_cov_1.081633_g80657_i0reverse_frame_2 - 0.25 10.8 3.6 0.27 10.7 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) NADH_B2 PF14813.6 NODE_88598_length_182_cov_1.081633_g80657_i0forward_frame_2 - 0.12 12.1 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 NADH dehydrogenase 1 beta subcomplex subunit 2 CEBP1_N PF16368.5 NODE_88596_length_182_cov_1.081633_g80655_i0forward_frame_3 - 0.064 12.8 0.0 0.071 12.6 0.0 1.0 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein 1 N-terminus Tsg PF04668.12 NODE_88594_length_182_cov_1.081633_g80653_i0forward_frame_2 - 0.054 14.2 0.0 0.071 13.8 0.0 1.2 1 0 0 1 1 1 0 Twisted gastrulation (Tsg) protein conserved region DUF728 PF05304.12 NODE_88594_length_182_cov_1.081633_g80653_i0forward_frame_2 - 0.084 12.7 0.0 0.093 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF728) SurA_N PF09312.11 NODE_88586_length_182_cov_1.081633_g80645_i0forward_frame_3 - 0.0035 17.4 0.6 0.078 13.1 0.1 2.0 2 0 0 2 2 2 1 SurA N-terminal domain SurA_N_3 PF13624.6 NODE_88586_length_182_cov_1.081633_g80645_i0forward_frame_3 - 0.11 12.3 0.9 1.5 8.6 1.0 1.9 1 1 0 1 1 1 0 SurA N-terminal domain S-AdoMet_synt_N PF00438.20 NODE_88586_length_182_cov_1.081633_g80645_i0forward_frame_3 - 0.14 12.9 0.1 0.18 12.5 0.1 1.2 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, N-terminal domain DUF2892 PF11127.8 NODE_88585_length_182_cov_1.081633_g80644_i0reverse_frame_2 - 0.12 12.4 1.5 0.16 12.1 1.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2892) TBCA PF02970.16 NODE_88579_length_182_cov_1.081633_g80638_i0reverse_frame_3 - 0.23 11.8 0.0 0.24 11.7 0.0 1.1 1 0 0 1 1 1 0 Tubulin binding cofactor A Ank_5 PF13857.6 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 2.6e-15 56.3 0.5 2.8e-07 30.7 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 1.7e-14 53.5 0.3 5.2e-06 26.7 0.0 2.0 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 2.3e-13 50.6 0.1 3e-13 50.2 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 5.5e-13 49.1 0.1 6.2e-13 49.0 0.1 1.0 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 1.6e-12 46.4 0.1 8.6e-06 25.7 0.0 2.0 2 0 0 2 2 2 2 Ankyrin repeat SpoIIP PF07454.11 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 0.096 12.1 0.1 0.25 10.8 0.0 1.6 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) KRBA1 PF15287.6 NODE_88573_length_182_cov_1.088435_g80632_i0reverse_frame_3 - 0.27 11.0 0.5 0.38 10.5 0.5 1.2 1 0 0 1 1 1 0 KRBA1 family repeat HOOK PF05622.12 NODE_88572_length_182_cov_1.088435_g80631_i0forward_frame_3 - 0.038 12.2 0.0 0.038 12.2 0.0 1.0 1 0 0 1 1 1 0 HOOK protein DUF1654 PF07867.11 NODE_88565_length_182_cov_1.088435_g80624_i0reverse_frame_3 - 0.18 11.6 0.1 0.21 11.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1654) Glyco_hydro_71 PF03659.14 NODE_88560_length_182_cov_1.088435_g80619_i0forward_frame_3 - 0.068 12.0 0.0 0.068 12.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 71 TFIIB PF00382.19 NODE_88559_length_182_cov_1.088435_g80618_i0forward_frame_2 - 0.023 14.7 0.1 0.031 14.3 0.1 1.2 1 0 0 1 1 1 0 Transcription factor TFIIB repeat SMP_C2CD2L PF18696.1 NODE_88555_length_182_cov_1.088435_g80614_i0forward_frame_2 - 0.046 13.5 0.0 0.054 13.3 0.0 1.0 1 0 0 1 1 1 0 Synaptotagmin-like, mitochondrial and lipid-binding domain Alpha_adaptin_C PF02296.16 NODE_88548_length_182_cov_1.088435_g80607_i0forward_frame_2 - 0.12 12.6 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain PMP1_2 PF08114.11 NODE_88545_length_182_cov_1.088435_g80604_i0reverse_frame_2 - 0.36 10.6 2.0 0.55 10.0 2.0 1.2 1 0 0 1 1 1 0 ATPase proteolipid family MHC_II_alpha PF00993.20 NODE_88545_length_182_cov_1.088435_g80604_i0forward_frame_3 - 0.054 13.2 0.0 0.079 12.6 0.0 1.3 1 0 0 1 1 1 0 Class II histocompatibility antigen, alpha domain DUF962 PF06127.11 NODE_88540_length_182_cov_1.088435_g80599_i0reverse_frame_3 - 1.9 8.6 5.3 2.3 8.4 5.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) MNE1 PF13762.6 NODE_88540_length_182_cov_1.088435_g80599_i0reverse_frame_2 - 0.05 13.6 0.2 0.058 13.4 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component DUF4807 PF16065.5 NODE_88540_length_182_cov_1.088435_g80599_i0reverse_frame_2 - 0.071 12.8 0.1 0.079 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4807) Thionin PF00321.17 NODE_88540_length_182_cov_1.088435_g80599_i0reverse_frame_2 - 0.078 13.5 0.1 0.11 13.0 0.1 1.3 1 0 0 1 1 1 0 Plant thionin Tektin PF03148.14 NODE_88538_length_182_cov_1.088435_g80597_i0forward_frame_2 - 0.033 12.9 0.5 0.034 12.9 0.5 1.0 1 0 0 1 1 1 0 Tektin family Mog1 PF04603.12 NODE_88534_length_182_cov_1.088435_g80593_i0reverse_frame_3 - 0.08 13.3 0.0 0.08 13.3 0.0 1.0 1 0 0 1 1 1 0 Ran-interacting Mog1 protein DUF2770 PF10968.8 NODE_88533_length_182_cov_1.088435_g80592_i0reverse_frame_2 - 0.088 12.8 1.1 0.11 12.5 0.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2770) Gln-synt_C PF00120.24 NODE_88532_length_182_cov_1.088435_g80591_i0forward_frame_2 - 0.001 18.2 0.0 0.0013 17.8 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain DUF1010 PF06231.11 NODE_88527_length_182_cov_1.088435_g80586_i0forward_frame_3 - 0.017 15.6 0.3 0.018 15.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) Presenilin PF01080.17 NODE_88522_length_182_cov_1.088435_g80581_i0forward_frame_2 - 0.65 8.7 10.8 0.71 8.6 10.8 1.0 1 0 0 1 1 1 0 Presenilin Pex24p PF06398.11 NODE_88522_length_182_cov_1.088435_g80581_i0forward_frame_2 - 5.3 5.9 6.8 5.6 5.9 6.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin TP53IP5 PF15331.6 NODE_88521_length_182_cov_1.088435_g80580_i0forward_frame_2 - 0.028 14.6 0.5 0.028 14.6 0.5 1.0 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 DAG_kinase_N PF14513.6 NODE_88513_length_182_cov_1.088435_g80572_i0forward_frame_2 - 0.17 12.1 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus zinc_ribbon_6 PF14599.6 NODE_88512_length_182_cov_1.088435_g80571_i0reverse_frame_2 - 0.043 13.8 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 Zinc-ribbon DUF1289 PF06945.13 NODE_88512_length_182_cov_1.088435_g80571_i0forward_frame_3 - 0.015 15.1 0.5 0.022 14.6 0.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1289) Ycf4 PF02392.16 NODE_88506_length_182_cov_1.088435_g80565_i0forward_frame_2 - 0.12 12.0 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Ycf4 Dpy-30 PF05186.13 NODE_88505_length_182_cov_1.088435_g80564_i0reverse_frame_2 - 0.042 13.6 0.1 0.065 12.9 0.1 1.4 1 0 0 1 1 1 0 Dpy-30 motif EF-hand_5 PF13202.6 NODE_88504_length_182_cov_1.088435_g80563_i0forward_frame_2 - 0.008 15.6 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 NODE_88504_length_182_cov_1.088435_g80563_i0forward_frame_2 - 0.11 12.1 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 EF hand zf-CRD PF17979.1 NODE_88503_length_182_cov_1.088435_g80562_i0forward_frame_3 - 0.28 11.3 5.3 0.34 11.0 5.3 1.1 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions zf-AN1 PF01428.16 NODE_88503_length_182_cov_1.088435_g80562_i0forward_frame_3 - 0.72 10.1 11.9 2.3 8.4 11.9 1.9 1 1 0 1 1 1 0 AN1-like Zinc finger zf-CW PF07496.15 NODE_88503_length_182_cov_1.088435_g80562_i0forward_frame_3 - 0.91 9.6 8.9 1.5 8.9 8.9 1.5 1 1 0 1 1 1 0 CW-type Zinc Finger ADD_DNMT3 PF17980.1 NODE_88503_length_182_cov_1.088435_g80562_i0forward_frame_3 - 2.3 8.3 9.9 0.84 9.7 6.0 1.9 2 0 0 2 2 2 0 Cysteine rich ADD domain in DNMT3 Plug_translocon PF10559.9 NODE_88500_length_182_cov_1.088435_g80559_i0forward_frame_3 - 0.077 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Plug domain of Sec61p CLIP_SPH_mas PF18398.1 NODE_88498_length_182_cov_1.088435_g80557_i0forward_frame_2 - 0.065 13.6 3.5 4.2 7.8 0.6 2.2 2 0 0 2 2 2 0 Clip-domain serine protease homolog masquerade Tcp11 PF05794.13 NODE_88488_length_182_cov_1.142857_g80547_i0reverse_frame_3 - 0.058 12.5 0.0 0.058 12.5 0.0 1.0 1 0 0 1 1 1 0 T-complex protein 11 DUF2061 PF09834.9 NODE_88483_length_182_cov_1.170068_g80542_i0reverse_frame_2 - 0.1 13.1 0.0 0.54 10.8 0.0 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2061) DUF3666 PF12408.8 NODE_88479_length_182_cov_1.183673_g80538_i0forward_frame_3 - 0.1 11.9 1.9 0.18 11.0 1.9 1.5 1 0 0 1 1 1 0 Ribose-5-phosphate isomerase CagZ PF09053.10 NODE_88476_length_182_cov_1.190476_g80535_i0reverse_frame_3 - 0.048 13.3 0.3 0.053 13.1 0.3 1.0 1 0 0 1 1 1 0 CagZ MutS_II PF05188.17 NODE_88475_length_182_cov_1.190476_g80534_i0reverse_frame_3 - 0.071 13.4 0.0 0.08 13.2 0.0 1.2 1 0 0 1 1 1 0 MutS domain II PRR20 PF15708.5 NODE_88470_length_182_cov_1.204082_g80529_i0reverse_frame_2 - 1.2 9.0 5.8 1.3 8.9 5.8 1.0 1 0 0 1 1 1 0 Proline-rich protein family 20 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks420.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks420.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks420.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks420.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Viral_cys_rich PF08008.12 NODE_88467_length_182_cov_1.217687_g80526_i0forward_frame_3 - 0.096 12.7 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Viral cysteine rich HECT PF00632.25 NODE_88464_length_182_cov_1.224490_g80523_i0forward_frame_2 - 6.5e-11 42.3 0.1 6.5e-11 42.3 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Phage_SSB PF16773.5 NODE_88460_length_182_cov_1.238095_g80519_i0forward_frame_3 - 0.024 14.7 0.0 0.027 14.5 0.0 1.0 1 0 0 1 1 1 0 Lactococcus phage single-stranded DNA binding protein SurA_N_2 PF13623.6 NODE_88460_length_182_cov_1.238095_g80519_i0forward_frame_3 - 0.048 13.5 0.2 0.05 13.5 0.2 1.0 1 0 0 1 1 1 0 SurA N-terminal domain Alg6_Alg8 PF03155.15 NODE_88459_length_182_cov_1.238095_g80518_i0reverse_frame_2 - 0.015 14.3 0.7 0.016 14.2 0.7 1.0 1 0 0 1 1 1 0 ALG6, ALG8 glycosyltransferase family Ion_trans PF00520.31 NODE_88457_length_182_cov_1.244898_g80516_i0forward_frame_3 - 0.00078 18.7 1.8 0.00085 18.6 1.8 1.0 1 0 0 1 1 1 1 Ion transport protein DUF1265 PF06887.14 NODE_88456_length_182_cov_1.244898_g80515_i0reverse_frame_3 - 0.019 14.9 0.6 0.026 14.5 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1265) TPP1 PF10341.9 NODE_88447_length_182_cov_1.272109_g80506_i0forward_frame_3 - 0.038 14.0 0.1 0.042 13.8 0.1 1.1 1 0 0 1 1 1 0 Shelterin complex subunit, TPP1/ACD LRR_4 PF12799.7 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.0015 18.9 1.9 0.0037 17.6 1.9 1.7 1 1 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.0018 18.0 0.4 0.17 11.6 0.1 2.2 2 0 0 2 2 2 2 Leucine rich repeat LRR_1 PF00560.33 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.0032 17.8 2.1 0.097 13.3 2.1 2.2 1 1 0 1 1 1 1 Leucine Rich Repeat LRR_6 PF13516.6 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.015 15.3 0.1 0.33 11.1 0.0 2.4 2 0 0 2 2 2 0 Leucine Rich repeat DUF913 PF06025.12 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.027 13.4 0.0 0.029 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) PAM2 PF07145.15 NODE_88438_length_182_cov_1.285714_g80497_i0forward_frame_2 - 0.023 14.3 4.5 0.19 11.5 0.7 2.6 2 1 0 2 2 2 0 Ataxin-2 C-terminal region Slu7 PF11708.8 NODE_88432_length_182_cov_1.292517_g80491_i0forward_frame_3 - 0.097 12.4 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Pre-mRNA splicing Prp18-interacting factor RBM1CTR PF08081.11 NODE_88432_length_182_cov_1.292517_g80491_i0forward_frame_2 - 0.62 10.2 9.9 1 9.5 9.9 1.4 1 1 0 1 1 1 0 RBM1CTR (NUC064) family PdxA PF04166.12 NODE_88429_length_182_cov_1.299320_g80488_i0forward_frame_3 - 0.21 11.0 0.0 0.21 11.0 0.0 1.0 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthetic protein PdxA 7TM_GPCR_Srt PF10321.9 NODE_88428_length_182_cov_1.299320_g80487_i0reverse_frame_3 - 0.041 12.9 0.7 0.039 12.9 0.7 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt BH3 PF15285.6 NODE_88428_length_182_cov_1.299320_g80487_i0reverse_frame_3 - 0.044 13.5 1.2 2 8.2 0.1 2.2 2 0 0 2 2 2 0 Beclin-1 BH3 domain, Bcl-2-interacting Dimerisation2 PF16864.5 NODE_88428_length_182_cov_1.299320_g80487_i0forward_frame_2 - 0.044 13.8 1.2 0.72 9.9 0.1 2.0 1 1 1 2 2 2 0 Dimerisation domain FAM194 PF14977.6 NODE_88422_length_182_cov_1.319728_g80481_i0reverse_frame_3 - 0.059 12.7 0.6 0.059 12.7 0.6 1.0 1 0 0 1 1 1 0 FAM194 protein Sec15 PF04091.12 NODE_88419_length_182_cov_1.333333_g80478_i0forward_frame_2 - 0.069 12.6 0.0 0.076 12.4 0.0 1.1 1 0 0 1 1 1 0 Exocyst complex subunit Sec15-like Mg_chelatase_C PF13335.6 NODE_88418_length_182_cov_1.333333_g80477_i0forward_frame_2 - 1.3e-20 73.8 0.1 1.4e-20 73.7 0.1 1.0 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI C-terminal AAA_lid_2 PF17863.1 NODE_88418_length_182_cov_1.333333_g80477_i0forward_frame_2 - 0.02 14.8 0.0 0.023 14.5 0.0 1.1 1 0 0 1 1 1 0 AAA lid domain RNA_pol_A_CTD PF03118.15 NODE_88418_length_182_cov_1.333333_g80477_i0forward_frame_2 - 0.022 14.5 0.0 0.16 11.7 0.0 1.9 1 1 1 2 2 2 0 Bacterial RNA polymerase, alpha chain C terminal domain AAA_lid_8 PF17868.1 NODE_88418_length_182_cov_1.333333_g80477_i0forward_frame_2 - 0.044 13.7 0.0 0.05 13.5 0.0 1.1 1 0 0 1 1 1 0 AAA lid domain Pept_S41_N PF18294.1 NODE_88417_length_182_cov_1.340136_g80476_i0forward_frame_3 - 0.034 14.2 0.2 0.2 11.7 0.1 1.9 2 0 0 2 2 2 0 Peptidase S41 N-terminal domain Glycoprotein PF03409.15 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_3 - 1.9 7.2 7.4 2.1 7.1 7.4 1.0 1 0 0 1 1 1 0 Transmembrane glycoprotein DUF4834 PF16118.5 NODE_88413_length_182_cov_1.346939_g80472_i0forward_frame_3 - 0.5 11.3 2.5 0.61 11.1 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4191 PF13829.6 NODE_88413_length_182_cov_1.346939_g80472_i0forward_frame_3 - 1.7 7.9 7.3 1.8 7.8 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) TPR_1 PF00515.28 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 1.6e-11 43.5 2.6 6.4e-08 32.1 0.1 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 1.2e-07 31.3 0.7 7.2e-05 22.6 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 4.7e-07 29.5 1.0 0.0001 22.3 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 2.5e-06 27.7 0.0 5e-06 26.7 0.0 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.00067 19.4 0.0 0.0011 18.7 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.017 14.5 0.0 0.03 13.8 0.0 1.3 1 0 0 1 1 1 0 SHNi-TPR TPR_16 PF13432.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.018 15.7 0.0 0.054 14.1 0.0 1.7 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.033 14.2 0.1 0.14 12.2 0.0 2.0 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.085 13.5 0.1 2.2 9.1 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat HTH_Bact PF18768.1 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.1 12.2 0.8 6 6.5 0.3 2.5 2 1 0 2 2 2 0 Helix-turn-helix bacterial domain DUF2738 PF10927.8 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.11 11.6 0.1 0.11 11.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2738) TPR_9 PF13371.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.12 12.5 0.0 0.27 11.4 0.0 1.5 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF641 PF04859.12 NODE_88406_length_182_cov_1.353741_g80465_i0reverse_frame_2 - 0.026 14.8 0.5 0.037 14.4 0.5 1.3 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Archease PF01951.16 NODE_88406_length_182_cov_1.353741_g80465_i0reverse_frame_2 - 0.14 12.4 0.1 0.16 12.2 0.1 1.0 1 0 0 1 1 1 0 Archease protein family (MTH1598/TM1083) HNH PF01844.23 NODE_88404_length_182_cov_1.353741_g80463_i0forward_frame_2 - 4.6e-05 23.5 4.4 5.9e-05 23.2 4.4 1.2 1 0 0 1 1 1 1 HNH endonuclease PSCyt2 PF07583.11 NODE_88404_length_182_cov_1.353741_g80463_i0forward_frame_2 - 0.092 12.7 0.3 0.12 12.3 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1549) RVT_2 PF07727.14 NODE_88403_length_182_cov_1.353741_g80462_i0reverse_frame_2 - 0.0001 22.0 0.0 0.0001 22.0 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Sugarporin_N PF11471.8 NODE_88400_length_182_cov_1.353741_g80459_i0reverse_frame_3 - 0.036 14.0 2.3 0.058 13.4 2.3 1.4 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension Gly-rich_Ago1 PF12764.7 NODE_88400_length_182_cov_1.353741_g80459_i0reverse_frame_2 - 0.016 15.9 2.1 0.018 15.8 2.1 1.2 1 0 0 1 1 1 0 Glycine-rich region of argonaut LMF1 PF06762.14 NODE_88399_length_182_cov_1.360544_g80458_i0forward_frame_2 - 6e-17 61.9 0.1 6.2e-17 61.8 0.1 1.1 1 0 0 1 1 1 1 Lipase maturation factor DUF3285 PF11688.8 NODE_88395_length_182_cov_1.360544_g80454_i0reverse_frame_2 - 0.061 13.2 0.6 0.086 12.8 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3285) Focadhesin PF11229.8 NODE_88395_length_182_cov_1.360544_g80454_i0forward_frame_3 - 0.082 11.1 0.0 0.083 11.1 0.0 1.0 1 0 0 1 1 1 0 Focadhesin Tax PF02959.16 NODE_88395_length_182_cov_1.360544_g80454_i0forward_frame_3 - 0.17 11.3 0.0 0.19 11.2 0.0 1.0 1 0 0 1 1 1 0 HTLV Tax zf-LITAF-like PF10601.9 NODE_88388_length_182_cov_1.360544_g80447_i0reverse_frame_3 - 9e-06 25.9 2.8 1.2e-05 25.5 2.8 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain FtsX PF02687.21 NODE_88387_length_182_cov_1.360544_g80446_i0forward_frame_2 - 2e-09 37.8 0.7 2e-09 37.8 0.7 1.0 1 0 0 1 1 1 1 FtsX-like permease family DUF3915 PF13054.6 NODE_88386_length_182_cov_1.360544_g80445_i0reverse_frame_3 - 0.24 11.4 1.4 0.28 11.2 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Renin_r PF07850.14 NODE_88385_length_182_cov_1.360544_g80444_i0reverse_frame_3 - 0.21 12.2 2.5 0.23 12.1 2.5 1.1 1 0 0 1 1 1 0 Renin receptor-like protein Pkinase PF00069.25 NODE_88380_length_182_cov_1.367347_g80439_i0reverse_frame_2 - 9.5e-15 54.7 0.0 9.7e-15 54.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_88380_length_182_cov_1.367347_g80439_i0reverse_frame_2 - 1.4e-05 24.5 0.0 1.5e-05 24.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase CBM_19 PF03427.13 NODE_88376_length_182_cov_1.380952_g80435_i0reverse_frame_2 - 0.062 13.3 1.7 0.07 13.1 1.7 1.2 1 0 0 1 1 1 0 Carbohydrate binding domain (family 19) Pkinase PF00069.25 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 4.2e-11 42.7 1.1 4.5e-11 42.6 1.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 7.2e-07 28.7 0.1 7.9e-07 28.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 0.0017 17.7 0.1 0.0017 17.7 0.1 1.0 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 0.005 15.7 0.3 0.0051 15.6 0.3 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 0.047 13.0 0.2 0.048 13.0 0.2 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Reprolysin PF01421.19 NODE_88369_length_182_cov_1.414966_g80428_i0forward_frame_3 - 0.13 12.2 0.0 0.14 12.1 0.0 1.0 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease MRP-S28 PF10213.9 NODE_88368_length_182_cov_1.414966_g80427_i0forward_frame_3 - 0.032 14.6 1.3 0.037 14.4 1.3 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit protein PqqA PF08042.11 NODE_88366_length_182_cov_1.428571_g80425_i0reverse_frame_2 - 0.0023 17.9 1.5 3.3 7.9 0.0 3.1 3 0 0 3 3 3 3 PqqA family Smr PF01713.21 NODE_88366_length_182_cov_1.428571_g80425_i0forward_frame_2 - 0.055 13.8 0.0 0.067 13.6 0.0 1.2 1 0 0 1 1 1 0 Smr domain GED PF02212.18 NODE_88365_length_182_cov_1.428571_g80424_i0forward_frame_2 - 0.0047 17.0 0.7 0.0054 16.9 0.7 1.1 1 0 0 1 1 1 1 Dynamin GTPase effector domain EB PF01683.18 NODE_88363_length_182_cov_1.428571_g80422_i0forward_frame_2 - 3.2e-05 24.1 6.1 3.8e-05 23.9 6.1 1.3 1 0 0 1 1 1 1 EB module Dickkopf_N PF04706.12 NODE_88363_length_182_cov_1.428571_g80422_i0forward_frame_2 - 4.3e-05 23.9 8.2 5.1e-05 23.7 8.2 1.1 1 0 0 1 1 1 1 Dickkopf N-terminal cysteine-rich region Statherin PF03875.13 NODE_88362_length_182_cov_1.435374_g80421_i0forward_frame_2 - 0.81 9.8 7.8 1.2 9.3 7.8 1.3 1 0 0 1 1 1 0 Statherin pKID PF02173.17 NODE_88361_length_182_cov_1.448980_g80420_i0forward_frame_2 - 0.3 10.6 3.2 0.45 10.0 3.2 1.2 1 0 0 1 1 1 0 pKID domain V-ATPase_G_2 PF16999.5 NODE_88358_length_182_cov_1.462585_g80417_i0reverse_frame_2 - 0.0037 17.6 0.3 0.0043 17.4 0.3 1.1 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit Peptidase_M20 PF01546.28 NODE_88356_length_182_cov_1.482993_g80415_i0forward_frame_3 - 0.0058 16.3 0.2 0.0088 15.8 0.2 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 DUF1117 PF06547.12 NODE_88356_length_182_cov_1.482993_g80415_i0forward_frame_3 - 0.095 13.3 0.2 0.12 12.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) SCA7 PF08313.12 NODE_88352_length_182_cov_1.482993_g80411_i0reverse_frame_3 - 0.016 15.1 1.1 0.019 14.8 0.4 1.5 1 1 0 1 1 1 0 SCA7, zinc-binding domain Tuberin PF03542.16 NODE_88347_length_182_cov_1.503401_g80406_i0reverse_frame_3 - 0.057 12.5 0.0 0.057 12.5 0.0 1.1 1 0 0 1 1 1 0 Tuberin DUF591 PF04569.14 NODE_88340_length_182_cov_1.551020_g80399_i0reverse_frame_3 - 0.2 11.7 5.4 0.062 13.4 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function Hexapep_loop PF18776.1 NODE_88335_length_182_cov_1.557823_g80394_i0reverse_frame_2 - 0.067 12.8 1.2 0.15 11.7 1.2 1.5 1 0 0 1 1 1 0 Hexapeptide repeat including loop FTR PF01913.18 NODE_88333_length_182_cov_1.571429_g80392_i0forward_frame_3 - 2.9 7.9 8.3 3.2 7.7 8.3 1.0 1 0 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase Tic110 PF16940.5 NODE_88333_length_182_cov_1.571429_g80392_i0forward_frame_3 - 4.3 5.7 12.0 4.5 5.6 12.0 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter DbpA PF03880.15 NODE_88330_length_182_cov_1.578231_g80389_i0reverse_frame_2 - 0.0034 17.4 0.0 0.0058 16.6 0.0 1.4 1 0 0 1 1 1 1 DbpA RNA binding domain Rubrerythrin PF02915.17 NODE_88326_length_182_cov_1.591837_g80385_i0forward_frame_2 - 0.088 13.2 0.0 0.092 13.1 0.0 1.0 1 0 0 1 1 1 0 Rubrerythrin Phage_G PF02306.15 NODE_88324_length_182_cov_1.598639_g80383_i0reverse_frame_3 - 0.081 12.7 0.0 0.083 12.6 0.0 1.0 1 0 0 1 1 1 0 Major spike protein (G protein) BTB PF00651.31 NODE_88323_length_182_cov_1.598639_g80382_i0reverse_frame_2 - 0.027 14.7 0.0 0.03 14.6 0.0 1.0 1 0 0 1 1 1 0 BTB/POZ domain DUF2535 PF10751.9 NODE_88323_length_182_cov_1.598639_g80382_i0forward_frame_3 - 0.14 12.7 0.0 0.15 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2535) DUF1412 PF07203.11 NODE_88321_length_182_cov_1.605442_g80380_i0reverse_frame_3 - 0.95 9.7 2.9 11 6.2 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1412) DUF2283 PF10049.9 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_3 - 0.15 12.3 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2283) NCD3G PF07562.14 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 0.0046 16.9 5.9 0.4 10.7 0.8 2.1 2 0 0 2 2 2 2 Nine Cysteines Domain of family 3 GPCR Ephrin_rec_like PF07699.13 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 0.07 12.9 13.0 0.96 9.3 6.6 2.7 1 1 1 2 2 2 0 Putative ephrin-receptor like zf-HYPF PF07503.12 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 0.46 10.3 5.4 2.4 8.0 1.2 2.3 2 0 0 2 2 2 0 HypF finger Opy2 PF09463.10 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 6.6 7.1 12.1 3.6 8.0 2.2 2.3 2 1 0 2 2 2 0 Opy2 protein Usg PF06233.12 NODE_88310_length_182_cov_1.619048_g80369_i0forward_frame_3 - 0.031 14.4 0.8 0.041 14.0 0.8 1.4 1 1 0 1 1 1 0 Usg-like family TrfA PF07042.11 NODE_88309_length_182_cov_1.625850_g80368_i0reverse_frame_3 - 0.13 11.3 0.2 0.13 11.2 0.2 1.0 1 0 0 1 1 1 0 TrfA protein Cas_CXXC_CXXC PF09706.10 NODE_88306_length_182_cov_1.632653_g80365_i0forward_frame_3 - 0.039 14.2 0.1 0.047 13.9 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) PHD PF00628.29 NODE_88304_length_182_cov_1.632653_g80363_i0forward_frame_3 - 0.01 15.7 2.1 0.014 15.3 2.1 1.3 1 0 0 1 1 1 0 PHD-finger WGR PF05406.15 NODE_88302_length_182_cov_1.632653_g80361_i0reverse_frame_3 - 1.5e-08 34.6 0.5 1.8e-08 34.3 0.4 1.2 1 1 0 1 1 1 1 WGR domain PP2C_2 PF13672.6 NODE_88300_length_182_cov_1.632653_g80359_i0forward_frame_2 - 0.0021 17.7 0.0 0.0023 17.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C YWFCY PF14293.6 NODE_88292_length_182_cov_1.632653_g80351_i0forward_frame_3 - 0.11 12.8 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 YWFCY protein DUF817 PF05675.12 NODE_88288_length_182_cov_1.632653_g80347_i0forward_frame_3 - 0.019 14.6 0.3 0.022 14.4 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF817) Phage_holin_3_3 PF16083.5 NODE_88287_length_182_cov_1.632653_g80346_i0reverse_frame_2 - 0.086 13.0 0.0 0.098 12.8 0.0 1.0 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III Lact-deh-memb PF09330.11 NODE_88285_length_182_cov_1.632653_g80344_i0reverse_frame_2 - 0.067 12.5 0.0 0.073 12.4 0.0 1.0 1 0 0 1 1 1 0 D-lactate dehydrogenase, membrane binding MauE PF07291.11 NODE_88276_length_182_cov_1.680272_g80335_i0reverse_frame_3 - 0.28 10.9 0.6 0.31 10.8 0.6 1.1 1 0 0 1 1 1 0 Methylamine utilisation protein MauE DUF1639 PF07797.14 NODE_88275_length_182_cov_1.687075_g80334_i0reverse_frame_3 - 0.055 13.5 1.0 0.07 13.1 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) CoxIIa PF08113.11 NODE_88274_length_182_cov_1.693878_g80333_i0forward_frame_3 - 0.036 13.9 1.5 0.045 13.6 1.5 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IIa family Stevor PF17410.2 NODE_88272_length_182_cov_1.707483_g80331_i0reverse_frame_3 - 0.17 11.4 6.4 0.18 11.4 6.4 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF5445 PF17520.2 NODE_88262_length_182_cov_1.782313_g80321_i0forward_frame_2 - 0.028 14.3 0.4 0.038 13.8 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5445) NAS PF03059.16 NODE_88260_length_182_cov_1.795918_g80319_i0reverse_frame_2 - 0.013 14.9 0.2 0.014 14.8 0.2 1.0 1 0 0 1 1 1 0 Nicotianamine synthase protein Clenterotox PF03505.14 NODE_88259_length_182_cov_1.802721_g80318_i0forward_frame_3 - 0.2 11.2 0.0 0.2 11.2 0.0 1.0 1 0 0 1 1 1 0 Clostridium enterotoxin DUF1874 PF08960.10 NODE_88245_length_182_cov_1.897959_g80304_i0forward_frame_3 - 0.039 14.1 0.2 0.044 13.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1874) Succ_DH_flav_C PF02910.20 NODE_88237_length_182_cov_1.911565_g80296_i0reverse_frame_3 - 0.0096 15.9 0.2 0.011 15.8 0.2 1.0 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term TPMT PF05724.11 NODE_88237_length_182_cov_1.911565_g80296_i0reverse_frame_3 - 0.029 14.0 0.1 0.029 14.0 0.1 1.1 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DUF5113 PF17140.4 NODE_88237_length_182_cov_1.911565_g80296_i0reverse_frame_3 - 0.12 12.2 1.0 0.19 11.5 1.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5113) Peptidase_M17 PF00883.21 NODE_88233_length_182_cov_1.945578_g80292_i0reverse_frame_3 - 1.2e-24 87.1 0.1 1.3e-24 87.1 0.1 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain DUF4257 PF14074.6 NODE_88228_length_182_cov_1.979592_g80287_i0reverse_frame_2 - 0.07 13.3 0.0 0.082 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4257) PDCD2_C PF04194.13 NODE_88224_length_182_cov_2.027211_g80283_i0reverse_frame_2 - 0.068 13.2 0.8 0.072 13.2 0.8 1.0 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain Prot_ATP_OB_N PF17758.1 NODE_88221_length_182_cov_2.047619_g80280_i0reverse_frame_3 - 0.96 9.1 2.7 21 4.9 0.1 2.7 3 0 0 3 3 3 0 Proteasomal ATPase OB N-terminal domain FNIP PF05725.12 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_2 - 3.8e-12 46.2 2.5 5.7e-06 26.4 0.3 2.0 2 0 0 2 2 2 2 FNIP Repeat LRR_11 PF18831.1 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_2 - 0.2 11.2 7.6 1.2 8.7 0.5 2.9 3 0 0 3 3 3 0 Leucine-rich repeat eIF3g PF12353.8 NODE_88220_length_182_cov_2.061224_g80279_i0forward_frame_3 - 0.0059 17.0 0.1 0.0067 16.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit G DUF1372 PF07116.11 NODE_88215_length_182_cov_2.115646_g80274_i0forward_frame_3 - 0.12 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1372) PAF-AH_p_II PF03403.13 NODE_88212_length_182_cov_2.136054_g80271_i0forward_frame_3 - 0.025 13.1 0.2 0.026 13.1 0.2 1.0 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II Methyltransf_FA PF12248.8 NODE_88208_length_182_cov_2.142857_g80267_i0reverse_frame_2 - 0.025 14.9 0.0 0.029 14.7 0.0 1.1 1 0 0 1 1 1 0 Farnesoic acid 0-methyl transferase Stealth_CR4 PF17103.5 NODE_88206_length_182_cov_2.170068_g80265_i0reverse_frame_3 - 0.061 13.2 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 Stealth protein CR4, conserved region 4 eIF3_subunit PF08597.10 NODE_88205_length_182_cov_2.170068_g80264_i0forward_frame_2 - 2.1 8.2 9.2 2.2 8.1 9.2 1.0 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit MatE PF01554.18 NODE_88203_length_182_cov_2.176871_g80262_i0reverse_frame_3 - 0.00088 19.0 1.0 0.0012 18.6 1.0 1.2 1 0 0 1 1 1 1 MatE Asp PF00026.23 NODE_88200_length_182_cov_2.176871_g80259_i0reverse_frame_2 - 0.00024 20.7 0.0 0.00025 20.6 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 NODE_88200_length_182_cov_2.176871_g80259_i0reverse_frame_2 - 0.0077 16.0 0.1 0.0078 16.0 0.1 1.0 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Msap1 PF17077.5 NODE_88199_length_182_cov_2.176871_g80258_i0reverse_frame_3 - 0.06 12.5 0.0 0.06 12.5 0.0 1.0 1 0 0 1 1 1 0 Mitotic spindle associated protein SHE1 Jacalin PF01419.17 NODE_88196_length_182_cov_2.258503_g80255_i0reverse_frame_2 - 3.6e-05 23.7 0.3 3.8e-05 23.6 0.3 1.0 1 0 0 1 1 1 1 Jacalin-like lectin domain DUF4913 PF16259.5 NODE_88193_length_182_cov_2.278912_g80252_i0reverse_frame_2 - 0.047 13.8 0.2 0.05 13.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4913) DHHC PF01529.20 NODE_88192_length_182_cov_2.285714_g80251_i0forward_frame_3 - 0.0002 21.5 0.0 0.0002 21.5 0.0 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase DUF2752 PF10825.8 NODE_88191_length_182_cov_2.285714_g80250_i0reverse_frame_3 - 0.11 12.6 0.2 7.3 6.7 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) MBOAT_2 PF13813.6 NODE_88191_length_182_cov_2.285714_g80250_i0forward_frame_2 - 0.024 14.9 0.0 0.027 14.7 0.0 1.0 1 0 0 1 1 1 0 Membrane bound O-acyl transferase family AXE1 PF05448.12 NODE_88190_length_182_cov_2.306122_g80249_i0forward_frame_2 - 0.084 11.5 0.0 0.1 11.3 0.0 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) DUF962 PF06127.11 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.14 12.3 1.9 0.15 12.1 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DUF454 PF04304.13 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.44 10.6 11.9 0.51 10.4 11.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF454) DUF1676 PF07898.13 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.51 10.3 13.1 0.63 10.1 13.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF2244 PF10003.9 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.55 9.9 4.8 0.62 9.7 4.8 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) DUF2207 PF09972.9 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.9 8.2 1.8 0.94 8.2 1.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) HlyD_2 PF12700.7 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 6.3 5.4 5.2 6.8 5.3 5.2 1.0 1 0 0 1 1 1 0 HlyD family secretion protein Orf78 PF06024.12 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_2 - 0.12 12.6 0.0 0.14 12.5 0.0 1.0 1 0 0 1 1 1 0 Orf78 (ac78) Cwf_Cwc_15 PF04889.12 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_2 - 9.7 5.8 17.5 10 5.7 17.5 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein NST1 PF13945.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_3 - 2.8 8.0 12.3 2.8 8.0 12.3 1.0 1 0 0 1 1 1 0 Salt tolerance down-regulator Tetraspanin PF00335.20 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.0021 17.8 0.7 0.0023 17.7 0.7 1.0 1 0 0 1 1 1 1 Tetraspanin family DUF417 PF04224.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.0029 17.2 1.4 0.0029 17.2 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF417 Shisa PF13908.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.0035 17.6 2.6 0.0038 17.5 2.6 1.0 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF2207 PF09972.9 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.0048 15.7 1.7 0.0051 15.6 1.7 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) LRRC37AB_C PF14914.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.043 13.7 6.0 0.046 13.6 6.0 1.1 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain SARAF PF06682.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.062 12.9 0.5 0.067 12.8 0.5 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis DUF4366 PF14283.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.075 13.1 0.7 0.091 12.8 0.7 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4366) Marek_A PF02124.15 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.085 12.7 2.2 0.095 12.5 2.2 1.1 1 0 0 1 1 1 0 Marek's disease glycoprotein A CrgA PF06781.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.096 12.8 1.7 0.12 12.4 1.7 1.3 1 1 0 1 1 1 0 Cell division protein CrgA LAP1C PF05609.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.12 11.5 2.1 0.12 11.4 2.1 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) DUF4220 PF13968.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.21 11.0 2.1 0.22 10.9 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) Ac81 PF05820.11 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.21 11.1 8.9 0.23 11.0 8.9 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 MMPL PF03176.15 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.34 9.8 7.1 0.35 9.7 7.1 1.1 1 0 0 1 1 1 0 MMPL family RIFIN PF02009.16 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.41 10.5 9.7 0.45 10.4 9.7 1.0 1 0 0 1 1 1 0 Rifin DUF3671 PF12420.8 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.54 10.4 9.7 0.16 12.0 7.1 1.5 1 1 0 1 1 1 0 Protein of unknown function GWT1 PF06423.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.57 10.3 4.4 0.73 9.9 4.4 1.3 1 1 0 1 1 1 0 GWT1 EMP24_GP25L PF01105.24 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 1.2 9.0 6.5 1.4 8.8 6.5 1.1 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Orf78 PF06024.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 3.6 7.9 14.9 11 6.4 14.9 1.7 1 1 0 1 1 1 0 Orf78 (ac78) T2SSF PF00482.23 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 5.1 7.1 11.6 29 4.6 11.6 1.9 1 1 0 1 1 1 0 Type II secretion system (T2SS), protein F Synaptobrevin PF00957.21 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 9.3 6.1 14.1 0.52 10.1 8.5 1.7 1 1 1 2 2 2 0 Synaptobrevin RIO1 PF01163.22 NODE_88184_length_182_cov_2.442177_g80243_i0reverse_frame_3 - 0.04 13.5 0.1 0.044 13.4 0.1 1.1 1 0 0 1 1 1 0 RIO1 family HECT PF00632.25 NODE_88183_length_182_cov_2.442177_g80242_i0forward_frame_3 - 0.00013 21.6 0.4 0.00013 21.5 0.4 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) DNA_pol_B_2 PF03175.13 NODE_88182_length_182_cov_2.442177_g80241_i0reverse_frame_2 - 7.3e-06 25.1 0.0 7.6e-06 25.1 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral SNARE_assoc PF09335.11 NODE_88177_length_182_cov_2.448980_g80236_i0reverse_frame_2 - 0.0013 19.2 2.6 0.0014 19.1 2.6 1.1 1 0 0 1 1 1 1 SNARE associated Golgi protein SfLAP PF11139.8 NODE_88177_length_182_cov_2.448980_g80236_i0reverse_frame_2 - 0.24 10.8 3.6 0.25 10.7 3.6 1.0 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein L_protein_N PF15518.6 NODE_88174_length_182_cov_2.476190_g80233_i0reverse_frame_3 - 0.15 11.9 0.3 0.17 11.8 0.3 1.2 1 0 0 1 1 1 0 L protein N-terminus HEAT_2 PF13646.6 NODE_88173_length_182_cov_2.482993_g80232_i0reverse_frame_2 - 0.06 13.7 0.0 0.072 13.5 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats Adeno_GP19K PF04881.13 NODE_88170_length_182_cov_2.503401_g80229_i0reverse_frame_3 - 0.024 14.6 0.2 0.028 14.4 0.2 1.1 1 0 0 1 1 1 0 Adenovirus GP19K Baculo_IE-1 PF05290.11 NODE_88167_length_182_cov_2.517007_g80226_i0reverse_frame_3 - 0.035 14.1 0.0 0.038 14.0 0.0 1.0 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) ComZ PF10815.8 NODE_88164_length_182_cov_2.591837_g80223_i0reverse_frame_3 - 0.066 13.2 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 ComZ Adipogenin PF15202.6 NODE_88163_length_182_cov_2.605442_g80222_i0reverse_frame_3 - 0.17 11.9 5.8 0.23 11.5 5.8 1.1 1 0 0 1 1 1 0 Adipogenin Glyco_transf_10 PF00852.19 NODE_88163_length_182_cov_2.605442_g80222_i0forward_frame_2 - 0.01 15.6 0.5 0.01 15.5 0.5 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 10 (fucosyltransferase) C-term DUF4756 PF15948.5 NODE_88163_length_182_cov_2.605442_g80222_i0forward_frame_2 - 0.058 13.3 1.1 0.064 13.1 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4756) Herpeto_peptide PF14409.6 NODE_88162_length_182_cov_2.612245_g80221_i0reverse_frame_3 - 0.072 13.3 0.0 0.085 13.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomally synthesized peptide in Herpetosiphon KRE1 PF17056.5 NODE_88158_length_182_cov_2.700680_g80217_i0reverse_frame_2 - 0.18 11.6 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 Killer toxin-resistance protein 1 Toxin_25 PF08095.11 NODE_88158_length_182_cov_2.700680_g80217_i0forward_frame_2 - 0.028 14.4 0.3 0.04 13.9 0.3 1.3 1 0 0 1 1 1 0 Hefutoxin family FB_lectin PF07367.11 NODE_88158_length_182_cov_2.700680_g80217_i0forward_frame_2 - 0.049 13.6 0.0 0.058 13.3 0.0 1.1 1 0 0 1 1 1 0 Fungal fruit body lectin Ribosomal_S17e PF00833.18 NODE_88156_length_182_cov_2.721088_g80215_i0reverse_frame_3 - 0.049 13.6 0.5 0.059 13.3 0.5 1.0 1 0 0 1 1 1 0 Ribosomal S17 DUF1980 PF09323.10 NODE_88149_length_182_cov_2.870748_g80208_i0forward_frame_2 - 0.28 11.1 6.1 0.31 10.9 6.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Cytochrom_B558a PF05038.13 NODE_88147_length_182_cov_2.870748_g80206_i0reverse_frame_2 - 0.43 10.1 3.1 0.43 10.1 3.1 1.1 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit WW PF00397.26 NODE_88146_length_182_cov_2.870748_g80205_i0forward_frame_2 - 4.1e-11 42.8 1.5 5.2e-11 42.4 1.5 1.2 1 0 0 1 1 1 1 WW domain Bact_transglu_N PF08379.10 NODE_88144_length_182_cov_3.020408_g80203_i0forward_frame_3 - 0.028 15.3 0.2 0.041 14.8 0.2 1.2 1 0 0 1 1 1 0 Bacterial transglutaminase-like N-terminal region V-set_2 PF15910.5 NODE_88141_length_182_cov_3.054422_g80200_i0reverse_frame_3 - 0.073 13.2 0.6 0.068 13.3 0.6 1.1 1 0 0 1 1 1 0 ICOS V-set domain tRNA_bind_3 PF17176.4 NODE_88138_length_182_cov_3.346939_g80197_i0forward_frame_3 - 0.074 13.4 0.0 0.074 13.4 0.0 1.1 1 0 0 1 1 1 0 tRNA-binding domain MSA-2c PF12238.8 NODE_88129_length_182_cov_4.442177_g80188_i0reverse_frame_3 - 0.19 11.7 4.8 0.21 11.6 4.8 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c zf-C2H2_aberr PF17017.5 NODE_88126_length_182_cov_4.748299_g80185_i0reverse_frame_3 - 0.001 19.2 0.7 0.0011 19.2 0.7 1.1 1 0 0 1 1 1 1 Aberrant zinc-finger zf-C2H2 PF00096.26 NODE_88126_length_182_cov_4.748299_g80185_i0reverse_frame_3 - 0.0016 18.8 0.4 0.0016 18.8 0.4 1.6 2 0 0 2 2 2 1 Zinc finger, C2H2 type FOXP-CC PF16159.5 NODE_88126_length_182_cov_4.748299_g80185_i0reverse_frame_3 - 0.023 15.3 0.1 0.026 15.2 0.1 1.1 1 0 0 1 1 1 0 FOXP coiled-coil domain DUF1125 PF06563.11 NODE_88125_length_182_cov_5.183673_g80184_i0reverse_frame_3 - 0.032 14.1 0.5 0.045 13.7 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1125) CBM_1 PF00734.18 NODE_88124_length_182_cov_6.925170_g80183_i0reverse_frame_2 - 7.5 6.6 6.7 1.5 8.9 2.3 1.9 2 0 0 2 2 2 0 Fungal cellulose binding domain DUF1231 PF06802.11 NODE_88123_length_182_cov_7.843537_g80182_i0reverse_frame_3 - 0.0094 15.1 0.4 0.01 15.0 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1231) SpvD PF05563.12 NODE_88123_length_182_cov_7.843537_g80182_i0reverse_frame_2 - 0.12 12.0 2.3 0.14 11.8 2.3 1.0 1 0 0 1 1 1 0 Salmonella plasmid virulence protein SpvD DHC_N1 PF08385.12 NODE_88120_length_182_cov_9.755102_g80179_i0reverse_frame_3 - 0.00016 20.5 0.7 0.00016 20.5 0.0 1.4 2 0 0 2 2 2 1 Dynein heavy chain, N-terminal region 1 Glyco_transf_17 PF04724.13 NODE_88120_length_182_cov_9.755102_g80179_i0reverse_frame_3 - 0.007 15.5 0.2 0.0075 15.3 0.2 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 17 Ada_Zn_binding PF02805.16 NODE_88117_length_182_cov_14.170068_g80176_i0reverse_frame_3 - 0.0086 16.1 0.6 0.0091 16.0 0.6 1.2 1 0 0 1 1 1 1 Metal binding domain of Ada Protocadherin PF08374.11 NODE_88113_length_182_cov_20.272109_g80172_i0reverse_frame_2 - 2.6 8.0 10.1 3.1 7.7 10.1 1.1 1 0 0 1 1 1 0 Protocadherin PyocinActivator PF11112.8 NODE_88102_length_182_cov_28.231293_g80161_i0forward_frame_3 - 0.022 14.9 0.0 0.025 14.7 0.0 1.1 1 0 0 1 1 1 0 Pyocin activator protein PrtN Chordopox_A30L PF06015.12 NODE_88100_length_182_cov_28.931973_g80159_i0reverse_frame_3 - 0.23 11.3 3.2 0.26 11.1 3.2 1.3 1 0 0 1 1 1 0 Chordopoxvirus A30L protein WD40_alt PF14077.6 NODE_88098_length_182_cov_29.673469_g80157_i0reverse_frame_3 - 0.033 14.0 3.9 0.072 13.0 1.7 1.9 2 0 0 2 2 2 0 Alternative WD40 repeat motif Sec62 PF03839.16 NODE_88096_length_182_cov_31.000000_g80155_i0forward_frame_3 - 1 8.9 4.0 1.1 8.7 4.0 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Poxvirus_B22R PF04395.12 NODE_88095_length_182_cov_31.190476_g80154_i0forward_frame_2 - 0.015 14.8 0.8 0.015 14.8 0.8 1.0 1 0 0 1 1 1 0 Poxvirus B22R protein DUF916 PF06030.12 NODE_88095_length_182_cov_31.190476_g80154_i0forward_frame_2 - 0.068 13.2 0.8 0.086 12.9 0.8 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF916) C_tripleX PF02363.19 NODE_88088_length_182_cov_33.537415_g80147_i0forward_frame_3 - 6.2 7.3 11.8 11 6.6 4.2 2.4 2 1 0 2 2 2 0 Cysteine rich repeat SeqA PF03925.13 NODE_88079_length_182_cov_37.340136_g80138_i0forward_frame_3 - 0.11 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 SeqA protein C-terminal domain Arg_decarbox_C PF17944.1 NODE_88075_length_182_cov_39.455782_g80134_i0reverse_frame_3 - 0.0063 17.1 0.5 0.0096 16.5 0.5 1.3 1 0 0 1 1 1 1 Arginine decarboxylase C-terminal helical extension GFD1 PF17331.2 NODE_88075_length_182_cov_39.455782_g80134_i0reverse_frame_3 - 0.12 12.6 4.5 0.16 12.2 1.4 2.3 2 0 0 2 2 2 0 GFD1 mRNA transport factor Trehalase_Ca-bi PF07492.11 NODE_88075_length_182_cov_39.455782_g80134_i0reverse_frame_3 - 0.39 10.5 3.7 0.94 9.3 0.5 2.4 2 0 0 2 2 2 0 Neutral trehalase Ca2+ binding domain Histone_H2A_C PF16211.5 NODE_88074_length_182_cov_39.496599_g80133_i0forward_frame_3 - 0.034 13.9 1.5 0.059 13.1 0.0 1.8 2 0 0 2 2 2 0 C-terminus of histone H2A bact-PGI_C PF10432.9 NODE_88073_length_182_cov_39.653061_g80132_i0forward_frame_3 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial phospho-glucose isomerase C-terminal SIS domain DUF2251 PF10008.9 NODE_88070_length_182_cov_44.061224_g80129_i0reverse_frame_2 - 0.1 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2251) C2-set_2 PF08205.12 NODE_88068_length_182_cov_45.034014_g80127_i0forward_frame_2 - 0.029 14.4 0.1 0.039 14.0 0.1 1.2 1 0 0 1 1 1 0 CD80-like C2-set immunoglobulin domain NADH_4Fe-4S PF10589.9 NODE_88066_length_182_cov_46.374150_g80125_i0reverse_frame_3 - 0.054 13.6 0.1 0.056 13.5 0.1 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GAT PF03127.14 NODE_88065_length_182_cov_46.482993_g80124_i0reverse_frame_3 - 0.12 12.7 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 GAT domain DUF4197 PF13852.6 NODE_88064_length_182_cov_48.034014_g80123_i0reverse_frame_3 - 0.04 13.6 0.0 0.047 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4197) FaeA PF04703.12 NODE_88062_length_182_cov_48.734694_g80121_i0reverse_frame_2 - 0.039 14.3 0.1 0.049 14.0 0.1 1.4 1 0 0 1 1 1 0 FaeA-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks421.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks421.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks421.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks421.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:30:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1691 PF07950.11 NODE_88059_length_182_cov_51.870748_g80118_i0forward_frame_3 - 0.15 12.8 0.0 0.17 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1691) CCB1 PF12046.8 NODE_88057_length_182_cov_53.088435_g80116_i0reverse_frame_3 - 0.12 11.8 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B PUD PF03714.14 NODE_88054_length_182_cov_59.312925_g80113_i0reverse_frame_3 - 0.08 13.8 0.0 0.091 13.6 0.0 1.1 1 0 0 1 1 1 0 Bacterial pullanase-associated domain DUF1672 PF07901.11 NODE_88049_length_182_cov_67.312925_g80108_i0reverse_frame_2 - 0.022 14.1 3.9 0.025 13.9 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1672) Psu PF07455.11 NODE_88045_length_182_cov_78.938776_g80104_i0forward_frame_3 - 0.13 11.9 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Phage polarity suppression protein (Psu) Csm1_N PF18504.1 NODE_88035_length_182_cov_129.489796_g80094_i0forward_frame_2 - 0.07 13.5 0.3 0.08 13.3 0.3 1.1 1 0 0 1 1 1 0 Csm1 N-terminal domain LPD24 PF18839.1 NODE_88031_length_182_cov_144.040816_g80090_i0forward_frame_2 - 0.2 11.9 0.4 0.3 11.4 0.4 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 24 Methyltransf_20 PF12147.8 NODE_88029_length_182_cov_152.877551_g80088_i0forward_frame_2 - 0.2 10.8 0.0 0.21 10.7 0.0 1.0 1 0 0 1 1 1 0 Putative methyltransferase UNC119_bdg PF15435.6 NODE_88019_length_182_cov_537.625850_g80078_i0forward_frame_2 - 0.08 12.5 0.1 0.085 12.4 0.1 1.0 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue DUF4867 PF16161.5 NODE_88017_length_182_cov_660.346939_g80076_i0forward_frame_2 - 0.046 13.2 0.1 0.046 13.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4867) DUF5542 PF17696.1 NODE_88016_length_182_cov_857.435374_g80075_i0forward_frame_3 - 0.26 11.4 1.2 0.32 11.1 1.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5542) YafO_toxin PF13957.6 NODE_88012_length_182_cov_226183.156463_g80071_i0forward_frame_2 - 0.018 15.1 0.0 0.02 14.9 0.0 1.0 1 0 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system EF-hand_9 PF14658.6 NODE_88008_length_183_cov_0.810811_g80067_i0reverse_frame_2 - 0.029 14.7 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain PIP49_C PF12260.8 NODE_88007_length_183_cov_0.810811_g80066_i0forward_frame_3 - 0.14 11.8 3.7 0.16 11.6 3.7 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 PBP1_TM PF14812.6 NODE_88002_length_183_cov_0.810811_g80061_i0reverse_frame_3 - 0.0025 18.1 3.2 0.0028 18.0 3.2 1.1 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal COX7a PF02238.15 NODE_88002_length_183_cov_0.810811_g80061_i0reverse_frame_3 - 0.91 10.0 2.5 1.2 9.6 2.5 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VII RPN5_C PF18098.1 NODE_88002_length_183_cov_0.810811_g80061_i0forward_frame_3 - 0.024 14.7 3.6 0.031 14.4 3.6 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN5 C-terminal domain EPV_E5 PF08135.11 NODE_88002_length_183_cov_0.810811_g80061_i0forward_frame_2 - 0.044 14.2 1.0 0.044 14.2 1.0 1.8 2 0 0 2 2 2 0 Major transforming protein E5 family DUF2613 PF11021.8 NODE_87997_length_183_cov_0.858108_g80056_i0reverse_frame_2 - 0.032 14.3 0.6 0.037 14.1 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2613) Mating_N PF12731.7 NODE_87994_length_183_cov_0.871622_g80053_i0reverse_frame_2 - 0.074 13.1 0.1 0.082 13.0 0.1 1.1 1 0 0 1 1 1 0 Mating-type protein beta 1 LexA_DNA_bind PF01726.16 NODE_87991_length_183_cov_0.885135_g80050_i0reverse_frame_3 - 0.12 12.2 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 LexA DNA binding domain Antimicrobial_2 PF08023.12 NODE_87986_length_183_cov_0.932432_g80045_i0reverse_frame_2 - 0.06 13.9 2.0 8 7.1 0.0 2.3 2 0 0 2 2 2 0 Frog antimicrobial peptide Peptidase_S10 PF00450.22 NODE_87986_length_183_cov_0.932432_g80045_i0forward_frame_2 - 0.0013 18.2 0.1 0.0015 18.0 0.1 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase Tugs PF17840.1 NODE_87979_length_183_cov_0.979730_g80038_i0reverse_frame_2 - 0.06 13.5 0.0 0.094 12.9 0.0 1.3 1 0 0 1 1 1 0 Tethering Ubl4a to BAGS domain TNV_CP PF03898.13 NODE_87979_length_183_cov_0.979730_g80038_i0forward_frame_2 - 0.025 13.9 0.0 0.028 13.7 0.0 1.0 1 0 0 1 1 1 0 Satellite tobacco necrosis virus coat protein SH3_11 PF18103.1 NODE_87969_length_183_cov_1.033784_g80028_i0reverse_frame_3 - 0.053 13.7 0.3 0.062 13.5 0.3 1.1 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain DUF1918 PF08940.11 NODE_87964_length_183_cov_1.047297_g80023_i0forward_frame_2 - 0.11 12.2 0.1 12 5.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1918) Usg PF06233.12 NODE_87962_length_183_cov_1.054054_g80021_i0forward_frame_2 - 0.03 14.5 0.0 0.031 14.4 0.0 1.1 1 0 0 1 1 1 0 Usg-like family FAM212 PF15342.6 NODE_87958_length_183_cov_1.067568_g80017_i0reverse_frame_2 - 0.11 12.3 0.1 0.17 11.7 0.1 1.3 1 0 0 1 1 1 0 FAM212 family Spp-24 PF07448.11 NODE_87939_length_183_cov_1.074324_g79998_i0reverse_frame_2 - 0.0097 16.1 0.4 0.016 15.4 0.4 1.4 1 0 0 1 1 1 1 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain DUF3698 PF12479.8 NODE_87938_length_183_cov_1.074324_g79997_i0forward_frame_3 - 0.028 14.9 1.1 0.032 14.8 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3698) RVT_3 PF13456.6 NODE_87937_length_183_cov_1.074324_g79996_i0reverse_frame_3 - 0.18 11.6 0.0 0.2 11.5 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase-like ArsP_2 PF11449.8 NODE_87932_length_183_cov_1.074324_g79991_i0forward_frame_2 - 0.26 10.5 0.0 0.26 10.5 0.0 1.0 1 0 0 1 1 1 0 Putative, 10TM heavy-metal exporter DNA_ligase_A_C PF04679.15 NODE_87920_length_183_cov_1.074324_g79979_i0forward_frame_3 - 0.058 14.0 0.2 0.07 13.7 0.2 1.0 1 0 0 1 1 1 0 ATP dependent DNA ligase C terminal region RE_HaeIII PF09556.10 NODE_87919_length_183_cov_1.074324_g79978_i0reverse_frame_2 - 0.11 11.6 0.2 0.12 11.4 0.2 1.1 1 0 0 1 1 1 0 HaeIII restriction endonuclease PDE6_gamma PF04868.12 NODE_87919_length_183_cov_1.074324_g79978_i0forward_frame_3 - 0.01 16.0 1.6 0.012 15.8 1.6 1.1 1 0 0 1 1 1 0 Retinal cGMP phosphodiesterase, gamma subunit Lyx_isomer PF07385.12 NODE_87914_length_183_cov_1.081081_g79973_i0forward_frame_3 - 0.031 13.6 0.0 0.035 13.4 0.0 1.0 1 0 0 1 1 1 0 D-lyxose isomerase Claudin_3 PF06653.11 NODE_87903_length_183_cov_1.081081_g79962_i0forward_frame_3 - 0.016 15.1 2.0 0.016 15.1 2.0 1.0 1 0 0 1 1 1 0 Tight junction protein, Claudin-like DUF3149 PF11346.8 NODE_87903_length_183_cov_1.081081_g79962_i0forward_frame_3 - 0.086 12.5 2.1 0.12 12.0 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) DUF429 PF04250.13 NODE_87901_length_183_cov_1.081081_g79960_i0forward_frame_3 - 0.027 14.2 0.0 0.029 14.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF429) Psb28 PF03912.14 NODE_87893_length_183_cov_1.081081_g79952_i0forward_frame_2 - 0.075 13.3 0.0 0.083 13.2 0.0 1.1 1 0 0 1 1 1 0 Psb28 protein UPF0560 PF10577.9 NODE_87893_length_183_cov_1.081081_g79952_i0forward_frame_2 - 0.078 11.5 0.0 0.094 11.2 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 Mrr_cat PF04471.12 NODE_87893_length_183_cov_1.081081_g79952_i0forward_frame_2 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease zf-RING_2 PF13639.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 5.6e-09 36.2 0.4 6.9e-09 35.9 0.4 1.1 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 6.7e-07 29.0 0.7 1.1e-06 28.3 0.7 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 2.1e-05 24.3 0.2 2.7e-05 23.9 0.2 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 5.3e-05 23.4 1.1 7.3e-05 23.0 1.1 1.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.0016 18.4 0.7 0.0048 16.9 0.5 1.8 1 1 1 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.0084 16.0 0.2 0.011 15.6 0.2 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.011 15.6 0.3 0.015 15.2 0.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.025 14.6 0.1 0.027 14.5 0.1 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.04 13.9 0.2 0.071 13.1 0.2 1.5 1 1 0 1 1 1 0 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.043 13.4 0.1 0.049 13.2 0.1 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4_3 PF13920.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.11 12.4 0.6 0.28 11.1 0.6 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) CDC4_D PF16856.5 NODE_87865_length_183_cov_1.081081_g79924_i0forward_frame_2 - 0.037 13.9 0.4 0.049 13.5 0.4 1.2 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain PSRT PF07636.11 NODE_87861_length_183_cov_1.081081_g79920_i0forward_frame_3 - 0.082 12.6 0.9 0.12 12.1 0.9 1.3 1 0 0 1 1 1 0 PSRT DUF1082 PF06449.11 NODE_87861_length_183_cov_1.081081_g79920_i0forward_frame_3 - 0.13 12.1 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) BIR PF00653.21 NODE_87860_length_183_cov_1.081081_g79919_i0forward_frame_3 - 0.062 14.0 0.0 0.077 13.7 0.0 1.1 1 0 0 1 1 1 0 Inhibitor of Apoptosis domain TES PF08034.11 NODE_87853_length_183_cov_1.081081_g79912_i0reverse_frame_2 - 0.086 13.1 0.1 0.14 12.4 0.1 1.4 1 0 0 1 1 1 0 Trematode eggshell synthesis protein FBA_1 PF07734.13 NODE_87851_length_183_cov_1.081081_g79910_i0reverse_frame_3 - 0.041 13.8 0.0 0.045 13.7 0.0 1.0 1 0 0 1 1 1 0 F-box associated Integrase_Zn PF02022.19 NODE_87851_length_183_cov_1.081081_g79910_i0reverse_frame_3 - 0.046 13.7 0.1 0.09 12.7 0.1 1.5 1 0 0 1 1 1 0 Integrase Zinc binding domain Rep_Org_C PF06926.11 NODE_87851_length_183_cov_1.081081_g79910_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus FXR_C1 PF16096.5 NODE_87850_length_183_cov_1.081081_g79909_i0forward_frame_3 - 0.25 11.6 6.8 0.3 11.3 6.8 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 FoP_duplication PF13865.6 NODE_87849_length_183_cov_1.081081_g79908_i0reverse_frame_2 - 3.4 8.3 8.9 4.1 8.0 8.9 1.1 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 VP_N-CPKC PF11475.8 NODE_87844_length_183_cov_1.081081_g79903_i0forward_frame_3 - 0.075 12.9 3.1 0.12 12.3 3.1 1.3 1 0 0 1 1 1 0 Virion protein N terminal domain DUF3586 PF12131.8 NODE_87835_length_183_cov_1.087838_g79894_i0forward_frame_2 - 0.074 13.3 2.5 0.11 12.7 2.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3586) DUF5476 PF17570.2 NODE_87835_length_183_cov_1.087838_g79894_i0forward_frame_2 - 0.12 12.8 1.4 0.16 12.4 1.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5476) MEDS PF14417.6 NODE_87829_length_183_cov_1.114865_g79888_i0forward_frame_2 - 0.13 12.1 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain DUF5556 PF17711.1 NODE_87822_length_183_cov_1.141892_g79881_i0forward_frame_2 - 0.055 13.4 0.5 0.063 13.2 0.5 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5556) 2TM PF13239.6 NODE_87821_length_183_cov_1.148649_g79880_i0reverse_frame_3 - 0.2 12.0 2.0 0.23 11.8 2.0 1.2 1 0 0 1 1 1 0 2TM domain Chorein_N PF12624.7 NODE_87821_length_183_cov_1.148649_g79880_i0forward_frame_3 - 0.061 13.4 0.0 0.061 13.4 0.0 1.0 1 0 0 1 1 1 0 N-terminal region of Chorein or VPS13 DNA_pol_viral_C PF00336.18 NODE_87812_length_183_cov_1.162162_g79871_i0forward_frame_3 - 0.06 12.7 0.0 0.06 12.7 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) C-terminal domain DUF3263 PF11662.8 NODE_87809_length_183_cov_1.175676_g79868_i0reverse_frame_3 - 0.025 14.4 0.0 1.9 8.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3263) OATP PF03137.20 NODE_87806_length_183_cov_1.189189_g79865_i0reverse_frame_2 - 0.0021 16.5 5.2 0.0022 16.4 5.2 1.0 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family CrgA PF06781.12 NODE_87806_length_183_cov_1.189189_g79865_i0reverse_frame_2 - 0.23 11.6 3.6 0.26 11.4 3.6 1.2 1 0 0 1 1 1 0 Cell division protein CrgA MCLC PF05934.11 NODE_87797_length_183_cov_1.216216_g79856_i0reverse_frame_2 - 1.9 7.1 4.4 2.1 7.0 4.4 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Ldh_1_C PF02866.18 NODE_87796_length_183_cov_1.216216_g79855_i0reverse_frame_2 - 0.013 15.4 0.0 0.013 15.4 0.0 1.1 1 0 0 1 1 1 0 lactate/malate dehydrogenase, alpha/beta C-terminal domain SAM_3 PF18016.1 NODE_87795_length_183_cov_1.222973_g79854_i0forward_frame_2 - 0.038 13.8 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) BNR_2 PF13088.6 NODE_87794_length_183_cov_1.222973_g79853_i0forward_frame_3 - 0.0096 15.3 0.2 0.01 15.2 0.2 1.0 1 0 0 1 1 1 1 BNR repeat-like domain DUF3862 PF12978.7 NODE_87785_length_183_cov_1.263514_g79844_i0reverse_frame_3 - 0.072 12.9 0.2 0.072 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3862) NHase_alpha PF02979.16 NODE_87779_length_183_cov_1.277027_g79838_i0reverse_frame_2 - 0.3 10.4 0.8 0.33 10.3 0.8 1.0 1 0 0 1 1 1 0 Nitrile hydratase, alpha chain Med6 PF04934.14 NODE_87774_length_183_cov_1.290541_g79833_i0reverse_frame_2 - 0.0046 16.8 0.2 0.0052 16.6 0.2 1.1 1 0 0 1 1 1 1 MED6 mediator sub complex component DUF4579 PF15158.6 NODE_87772_length_183_cov_1.290541_g79831_i0forward_frame_2 - 0.03 14.1 0.2 0.033 14.0 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) TMEM154 PF15102.6 NODE_87772_length_183_cov_1.290541_g79831_i0forward_frame_2 - 0.031 14.2 0.1 0.035 14.0 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family TPR_1 PF00515.28 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 8.2e-06 25.4 1.0 1.1e-05 25.0 1.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 3.2e-05 23.8 0.6 4.7e-05 23.3 0.6 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.00025 21.3 0.1 0.00029 21.1 0.1 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.00093 19.0 0.1 0.0012 18.6 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.00093 19.1 0.0 0.0013 18.6 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.0012 18.8 0.2 0.0017 18.3 0.2 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.0074 16.6 0.6 0.018 15.4 0.1 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.052 14.4 0.0 0.057 14.3 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.14 11.8 1.7 0.3 10.8 0.5 1.9 1 1 1 2 2 2 0 TPR repeat Proteasom_Rpn13 PF04683.13 NODE_87762_length_183_cov_1.317568_g79821_i0forward_frame_3 - 0.045 14.3 0.1 0.052 14.1 0.1 1.1 1 0 0 1 1 1 0 Proteasome complex subunit Rpn13 ubiquitin receptor RWP-RK PF02042.15 NODE_87761_length_183_cov_1.324324_g79820_i0forward_frame_2 - 0.13 12.3 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 RWP-RK domain DUF2929 PF11151.8 NODE_87752_length_183_cov_1.344595_g79811_i0forward_frame_3 - 0.031 14.5 1.1 0.043 14.1 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2929) DUF1281_C PF18406.1 NODE_87750_length_183_cov_1.351351_g79809_i0reverse_frame_2 - 0.089 12.5 0.0 0.093 12.4 0.0 1.1 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein DUF1985 PF09331.11 NODE_87748_length_183_cov_1.351351_g79807_i0reverse_frame_2 - 0.1 12.6 0.2 0.11 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1985) DUF384 PF04064.13 NODE_87747_length_183_cov_1.351351_g79806_i0reverse_frame_2 - 0.12 12.3 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF384) HSP90 PF00183.18 NODE_87743_length_183_cov_1.351351_g79802_i0reverse_frame_3 - 0.042 12.8 0.5 0.04 12.8 0.5 1.0 1 0 0 1 1 1 0 Hsp90 protein Aminopep PF10023.9 NODE_87735_length_183_cov_1.398649_g79794_i0forward_frame_2 - 0.0086 15.5 0.8 0.009 15.4 0.8 1.0 1 0 0 1 1 1 1 Putative aminopeptidase Vhr1 PF04001.13 NODE_87735_length_183_cov_1.398649_g79794_i0forward_frame_2 - 0.0094 16.2 0.6 0.12 12.7 0.1 2.1 1 1 1 2 2 2 1 Transcription factor Vhr1 Ycf34 PF10718.9 NODE_87734_length_183_cov_1.412162_g79793_i0reverse_frame_3 - 0.025 15.2 0.4 0.028 15.1 0.4 1.1 1 0 0 1 1 1 0 Hypothetical chloroplast protein Ycf34 baeRF_family7 PF18849.1 NODE_87734_length_183_cov_1.412162_g79793_i0reverse_frame_2 - 0.074 13.3 0.0 0.082 13.1 0.0 1.0 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 7 PTPRCAP PF15713.5 NODE_87733_length_183_cov_1.412162_g79792_i0reverse_frame_3 - 1.2 9.4 3.4 1.2 9.4 3.3 1.3 1 1 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated MCM PF00493.23 NODE_87730_length_183_cov_1.425676_g79789_i0forward_frame_2 - 6.5e-24 84.3 0.2 6.9e-24 84.2 0.2 1.0 1 0 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 NODE_87730_length_183_cov_1.425676_g79789_i0forward_frame_2 - 0.0018 17.7 0.0 0.002 17.5 0.0 1.0 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 NODE_87730_length_183_cov_1.425676_g79789_i0forward_frame_2 - 0.048 13.5 0.0 0.054 13.3 0.0 1.0 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 NODE_87730_length_183_cov_1.425676_g79789_i0forward_frame_2 - 0.055 13.5 0.0 0.058 13.4 0.0 1.0 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Albumin_I PF08027.11 NODE_87723_length_183_cov_1.452703_g79782_i0forward_frame_2 - 0.081 12.5 1.5 0.081 12.5 1.5 1.8 2 1 0 2 2 2 0 Albumin I chain b Pep3_Vps18 PF05131.14 NODE_87722_length_183_cov_1.459459_g79781_i0forward_frame_3 - 3e-14 53.1 0.4 3.1e-14 53.0 0.4 1.0 1 0 0 1 1 1 1 Pep3/Vps18/deep orange family Rubredoxin_2 PF18073.1 NODE_87721_length_183_cov_1.459459_g79780_i0reverse_frame_2 - 0.09 12.5 1.9 0.09 12.5 1.9 1.8 3 0 0 3 3 3 0 Rubredoxin metal binding domain IPPT PF01715.17 NODE_87719_length_183_cov_1.472973_g79778_i0forward_frame_2 - 0.18 11.6 0.0 0.18 11.6 0.0 1.0 1 0 0 1 1 1 0 IPP transferase Gemini_AL2 PF01440.16 NODE_87716_length_183_cov_1.500000_g79775_i0forward_frame_3 - 0.18 12.2 0.6 0.2 12.1 0.6 1.1 1 0 0 1 1 1 0 Geminivirus AL2 protein DUF4164 PF13747.6 NODE_87712_length_183_cov_1.520270_g79771_i0reverse_frame_2 - 0.015 15.6 0.1 0.015 15.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) NYD-SP28_assoc PF14775.6 NODE_87695_length_183_cov_1.594595_g79754_i0forward_frame_3 - 0.062 13.4 1.0 0.062 13.4 1.0 1.5 2 0 0 2 2 2 0 Sperm tail C-terminal domain DUF2783 PF10932.8 NODE_87694_length_183_cov_1.594595_g79753_i0reverse_frame_3 - 0.05 13.3 1.3 0.067 12.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2783) Asp_Glu_race_2 PF14669.6 NODE_87692_length_183_cov_1.594595_g79751_i0forward_frame_3 - 0.017 14.8 0.2 0.021 14.5 0.2 1.1 1 0 0 1 1 1 0 Putative aspartate racemase Lactamase_B_4 PF13691.6 NODE_87691_length_183_cov_1.594595_g79750_i0reverse_frame_2 - 0.097 12.4 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 tRNase Z endonuclease DUF1676 PF07898.13 NODE_87688_length_183_cov_1.601351_g79747_i0forward_frame_3 - 0.011 15.8 2.1 0.011 15.8 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) TPR_14 PF13428.6 NODE_87686_length_183_cov_1.608108_g79745_i0reverse_frame_3 - 0.03 15.1 0.2 0.039 14.8 0.2 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat zf-AN1 PF01428.16 NODE_87679_length_183_cov_1.614865_g79738_i0reverse_frame_3 - 0.015 15.4 4.2 0.015 15.4 4.2 1.6 2 0 0 2 2 2 0 AN1-like Zinc finger ODV-E18 PF10717.9 NODE_87679_length_183_cov_1.614865_g79738_i0forward_frame_2 - 0.18 11.7 1.7 0.22 11.4 1.7 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Wzy_C PF04932.15 NODE_87678_length_183_cov_1.614865_g79737_i0forward_frame_3 - 0.15 11.7 5.2 0.15 11.6 5.2 1.0 1 0 0 1 1 1 0 O-Antigen ligase Sigma_reg_N PF13800.6 NODE_87676_length_183_cov_1.614865_g79735_i0forward_frame_2 - 0.052 13.9 2.3 0.065 13.5 2.3 1.1 1 0 0 1 1 1 0 Sigma factor regulator N-terminal IL1 PF00340.19 NODE_87675_length_183_cov_1.614865_g79734_i0forward_frame_2 - 0.023 14.4 0.1 0.025 14.2 0.1 1.1 1 0 0 1 1 1 0 Interleukin-1 / 18 CTP-dep_RFKase PF01982.16 NODE_87670_length_183_cov_1.621622_g79729_i0reverse_frame_3 - 0.084 13.0 0.1 0.096 12.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF120 s48_45 PF07422.13 NODE_87670_length_183_cov_1.621622_g79729_i0forward_frame_2 - 0.1 13.2 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Sexual stage antigen s48/45 domain zf-U1 PF06220.12 NODE_87668_length_183_cov_1.621622_g79727_i0reverse_frame_3 - 0.16 11.8 1.7 0.43 10.4 0.2 2.1 2 0 0 2 2 2 0 U1 zinc finger TM2 PF05154.16 NODE_87667_length_183_cov_1.621622_g79726_i0forward_frame_2 - 0.039 14.3 0.1 0.055 13.8 0.1 1.2 1 0 0 1 1 1 0 TM2 domain Pox_T4_N PF04491.12 NODE_87666_length_183_cov_1.621622_g79725_i0forward_frame_3 - 0.099 12.5 0.5 0.14 12.0 0.5 1.3 1 0 0 1 1 1 0 Poxvirus T4 protein, N terminus Ribosomal_L23eN PF03939.13 NODE_87660_length_183_cov_1.621622_g79719_i0reverse_frame_3 - 0.053 13.7 0.3 0.068 13.4 0.3 1.2 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain DUF3995 PF13160.6 NODE_87660_length_183_cov_1.621622_g79719_i0forward_frame_2 - 0.042 14.2 0.4 0.042 14.2 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) Spc7 PF08317.11 NODE_87653_length_183_cov_1.628378_g79712_i0reverse_frame_3 - 0.071 12.0 0.1 0.076 11.9 0.1 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks422.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks422.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks422.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks422.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Med9 PF07544.13 NODE_87643_length_183_cov_1.668919_g79702_i0reverse_frame_2 - 0.0019 18.2 1.3 0.0022 18.1 1.3 1.2 1 0 0 1 1 1 1 RNA polymerase II transcription mediator complex subunit 9 WD40_alt PF14077.6 NODE_87643_length_183_cov_1.668919_g79702_i0reverse_frame_2 - 0.036 13.9 1.1 0.061 13.2 0.1 1.8 1 1 1 2 2 2 0 Alternative WD40 repeat motif TMPIT PF07851.13 NODE_87643_length_183_cov_1.668919_g79702_i0reverse_frame_2 - 0.44 9.7 2.8 0.43 9.8 2.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein Sp38 PF07354.12 NODE_87640_length_183_cov_1.682432_g79699_i0reverse_frame_3 - 0.051 13.0 0.3 0.054 12.9 0.3 1.0 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) adh_short PF00106.25 NODE_87639_length_183_cov_1.689189_g79698_i0reverse_frame_3 - 0.0031 17.0 0.0 0.0035 16.8 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_87639_length_183_cov_1.689189_g79698_i0reverse_frame_3 - 0.02 14.5 0.0 0.022 14.3 0.0 1.0 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Methyltransf_19 PF04672.12 NODE_87639_length_183_cov_1.689189_g79698_i0reverse_frame_3 - 0.13 11.8 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 S-adenosyl methyltransferase zf-CCCH_6 PF18585.1 NODE_87636_length_183_cov_1.709459_g79695_i0reverse_frame_3 - 2 8.4 7.4 3.7 7.5 7.4 1.5 1 1 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 Chloroa_b-bind PF00504.21 NODE_87632_length_183_cov_1.722973_g79691_i0forward_frame_3 - 7.6e-08 33.1 0.1 8.2e-08 32.9 0.1 1.0 1 0 0 1 1 1 1 Chlorophyll A-B binding protein RVT_2 PF07727.14 NODE_87631_length_183_cov_1.729730_g79690_i0reverse_frame_3 - 0.048 13.3 0.0 0.05 13.2 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Spore_GerQ PF09671.10 NODE_87631_length_183_cov_1.729730_g79690_i0reverse_frame_3 - 0.11 12.5 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Spore coat protein (Spore_GerQ) DNA_pol_B_thumb PF14791.6 NODE_87631_length_183_cov_1.729730_g79690_i0reverse_frame_2 - 0.048 13.8 0.2 0.051 13.7 0.2 1.1 1 0 0 1 1 1 0 DNA polymerase beta thumb Hen1_Lam_C PF18441.1 NODE_87629_length_183_cov_1.736486_g79688_i0reverse_frame_3 - 0.15 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Hen1 La-motif C-terminal domain zf-C3HC4_2 PF13923.6 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.00054 19.8 9.5 0.00095 19.0 9.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.0009 19.2 10.9 0.0017 18.3 10.9 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_2 PF13639.6 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.0063 16.8 10.2 0.0063 16.8 10.2 1.5 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_4 PF15227.6 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.0081 16.3 11.4 0.0081 16.3 11.4 1.7 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.012 15.4 9.9 0.012 15.4 9.9 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) MFS_1 PF07690.16 NODE_87626_length_183_cov_1.750000_g79685_i0reverse_frame_3 - 0.00017 20.7 1.3 0.00018 20.6 1.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Arm-DNA-bind_1 PF09003.10 NODE_87626_length_183_cov_1.750000_g79685_i0forward_frame_2 - 0.04 14.1 0.1 0.041 14.0 0.1 1.2 1 0 0 1 1 1 0 Bacteriophage lambda integrase, Arm DNA-binding domain KduI PF04962.12 NODE_87617_length_183_cov_1.790541_g79676_i0reverse_frame_2 - 0.022 14.1 0.1 0.023 14.0 0.1 1.1 1 0 0 1 1 1 0 KduI/IolB family PRY PF13765.6 NODE_87608_length_183_cov_1.844595_g79667_i0reverse_frame_3 - 0.11 12.2 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 SPRY-associated domain MutL_C PF08676.11 NODE_87604_length_183_cov_1.851351_g79663_i0forward_frame_3 - 0.14 11.9 0.0 0.15 11.8 0.0 1.0 1 0 0 1 1 1 0 MutL C terminal dimerisation domain Me-amine-dh_L PF02975.14 NODE_87603_length_183_cov_1.851351_g79662_i0forward_frame_3 - 0.15 12.6 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Methylamine dehydrogenase, L chain DUF1027 PF06265.11 NODE_87601_length_183_cov_1.864865_g79660_i0reverse_frame_3 - 0.13 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1027) Tetraspanin PF00335.20 NODE_87596_length_183_cov_1.891892_g79655_i0reverse_frame_3 - 6.6 6.4 9.4 7.7 6.1 9.4 1.1 1 0 0 1 1 1 0 Tetraspanin family DbpA PF03880.15 NODE_87596_length_183_cov_1.891892_g79655_i0forward_frame_2 - 0.025 14.6 0.3 0.027 14.5 0.3 1.1 1 0 0 1 1 1 0 DbpA RNA binding domain zf-tcix PF14952.6 NODE_87595_length_183_cov_1.891892_g79654_i0reverse_frame_3 - 0.14 11.7 3.5 0.25 11.0 3.5 1.3 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding DUF4385 PF14328.6 NODE_87593_length_183_cov_1.891892_g79652_i0forward_frame_2 - 0.046 13.8 0.4 0.05 13.7 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4385) SRR PF07709.11 NODE_87592_length_183_cov_1.891892_g79651_i0forward_frame_2 - 0.067 13.6 1.2 0.72 10.5 0.2 2.4 2 0 0 2 2 2 0 Seven Residue Repeat SK_channel PF03530.14 NODE_87591_length_183_cov_1.891892_g79650_i0forward_frame_2 - 0.056 13.4 3.0 0.067 13.2 3.0 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel MORN PF02493.20 NODE_87585_length_183_cov_1.918919_g79644_i0reverse_frame_2 - 0.0029 17.4 5.6 0.0039 17.0 1.8 2.2 2 0 0 2 2 2 1 MORN repeat Nucleic_acid_bd PF13820.6 NODE_87581_length_183_cov_1.952703_g79640_i0reverse_frame_2 - 0.11 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative nucleic acid-binding region Adeno_E3B PF03376.14 NODE_87579_length_183_cov_2.013514_g79638_i0forward_frame_2 - 0.03 14.6 0.3 0.036 14.3 0.3 1.2 1 0 0 1 1 1 0 Adenovirus E3B protein HATPase_c PF02518.26 NODE_87578_length_183_cov_2.020270_g79637_i0reverse_frame_3 - 2.6e-07 31.1 0.2 2.7e-07 31.1 0.2 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 NODE_87578_length_183_cov_2.020270_g79637_i0reverse_frame_3 - 0.048 13.5 0.1 0.05 13.4 0.1 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_gyraseA_C PF03989.13 NODE_87576_length_183_cov_2.047297_g79635_i0forward_frame_2 - 0.059 12.9 0.0 0.074 12.5 0.0 1.2 1 0 0 1 1 1 0 DNA gyrase C-terminal domain, beta-propeller DUF5533 PF17685.1 NODE_87571_length_183_cov_2.108108_g79630_i0forward_frame_3 - 0.081 13.3 0.6 0.084 13.3 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5533) DUF3258 PF11646.8 NODE_87564_length_183_cov_2.148649_g79623_i0reverse_frame_3 - 0.041 14.0 0.1 0.041 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF3258 Rhabdo_M1 PF03342.13 NODE_87564_length_183_cov_2.148649_g79623_i0reverse_frame_3 - 0.074 12.4 0.1 0.074 12.4 0.1 1.0 1 0 0 1 1 1 0 Rhabdovirus M1 matrix protein (M1 polymerase-associated protein) Spectrin_like PF18373.1 NODE_87562_length_183_cov_2.155405_g79621_i0reverse_frame_2 - 0.045 13.8 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 Spectrin like domain Rad60-SLD_2 PF13881.6 NODE_87561_length_183_cov_2.155405_g79620_i0forward_frame_2 - 0.09 12.9 0.3 0.098 12.8 0.3 1.1 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like CCDC14 PF15254.6 NODE_87559_length_183_cov_2.162162_g79618_i0reverse_frame_3 - 0.036 12.7 4.0 0.042 12.5 4.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 zinc_ribbon_10 PF10058.9 NODE_87557_length_183_cov_2.162162_g79616_i0reverse_frame_3 - 0.0045 16.7 0.1 0.0048 16.6 0.1 1.1 1 0 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein PHD_2 PF13831.6 NODE_87557_length_183_cov_2.162162_g79616_i0reverse_frame_3 - 0.057 13.0 0.6 0.057 13.0 0.6 1.5 2 0 0 2 2 2 0 PHD-finger DUF2069 PF09842.9 NODE_87557_length_183_cov_2.162162_g79616_i0forward_frame_2 - 0.15 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2069) PET10 PF17316.2 NODE_87555_length_183_cov_2.168919_g79614_i0reverse_frame_2 - 0.14 11.6 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 Petite colonies protein 10 YozD PF14162.6 NODE_87553_length_183_cov_2.236486_g79612_i0forward_frame_2 - 0.19 12.0 0.0 0.26 11.6 0.0 1.1 1 0 0 1 1 1 0 YozD-like protein His_biosynth PF00977.21 NODE_87550_length_183_cov_2.290541_g79609_i0forward_frame_3 - 2e-11 43.8 0.0 2.1e-11 43.7 0.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Ph1570 PF09638.10 NODE_87544_length_183_cov_2.371622_g79603_i0reverse_frame_2 - 0.049 13.5 0.1 0.056 13.3 0.1 1.1 1 0 0 1 1 1 0 Ph1570 protein DUF2518 PF10726.9 NODE_87541_length_183_cov_2.398649_g79600_i0reverse_frame_3 - 0.71 9.5 4.1 0.8 9.4 4.1 1.0 1 0 0 1 1 1 0 Protein of function (DUF2518) SLATT_5 PF18160.1 NODE_87541_length_183_cov_2.398649_g79600_i0reverse_frame_3 - 9.3 5.5 8.2 11 5.3 8.2 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 CAP_N PF01213.19 NODE_87535_length_183_cov_2.459459_g79594_i0reverse_frame_2 - 0.1 12.1 9.8 0.096 12.2 9.8 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal VIR_N PF15912.5 NODE_87535_length_183_cov_2.459459_g79594_i0reverse_frame_2 - 0.24 10.9 3.7 0.23 11.0 3.7 1.0 1 0 0 1 1 1 0 Virilizer, N-terminal Mito_fiss_reg PF05308.11 NODE_87535_length_183_cov_2.459459_g79594_i0reverse_frame_2 - 0.28 11.3 6.1 0.29 11.2 6.1 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator PRIMA1 PF16101.5 NODE_87535_length_183_cov_2.459459_g79594_i0reverse_frame_2 - 0.3 11.1 7.7 0.31 11.1 7.7 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 MlaC PF05494.12 NODE_87524_length_183_cov_2.641892_g79583_i0forward_frame_2 - 0.22 11.3 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 MlaC protein DUF2975 PF11188.8 NODE_87523_length_183_cov_2.695946_g79582_i0forward_frame_3 - 0.089 12.7 1.7 0.087 12.7 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) TGase_elicitor PF16683.5 NODE_87521_length_183_cov_2.722973_g79580_i0reverse_frame_2 - 0.021 13.6 0.9 0.023 13.5 0.9 1.0 1 0 0 1 1 1 0 Transglutaminase elicitor amfpi-1 PF12190.8 NODE_87521_length_183_cov_2.722973_g79580_i0forward_frame_2 - 0.0056 17.3 1.9 0.0058 17.2 1.9 1.1 1 0 0 1 1 1 1 Fungal protease inhibitor POM121 PF15229.6 NODE_87519_length_183_cov_2.743243_g79578_i0reverse_frame_2 - 0.055 13.1 1.4 0.054 13.1 1.4 1.1 1 0 0 1 1 1 0 POM121 family BLF1 PF17752.1 NODE_87518_length_183_cov_2.783784_g79577_i0reverse_frame_3 - 0.079 12.3 0.1 0.083 12.2 0.1 1.0 1 0 0 1 1 1 0 Burkholderia lethal factor 1 Response_reg PF00072.24 NODE_87518_length_183_cov_2.783784_g79577_i0forward_frame_3 - 0.01 16.0 0.0 0.017 15.3 0.0 1.4 2 0 0 2 2 2 0 Response regulator receiver domain Glyco_hydro_16 PF00722.21 NODE_87517_length_183_cov_2.790541_g79576_i0reverse_frame_2 - 0.18 11.2 0.0 0.18 11.2 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 16 DUF1640 PF07798.11 NODE_87511_length_183_cov_3.101351_g79570_i0reverse_frame_2 - 0.035 14.1 0.1 0.04 14.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DUF4482 PF14818.6 NODE_87511_length_183_cov_3.101351_g79570_i0reverse_frame_2 - 0.093 13.6 0.0 0.1 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4482) ATP-synt_E_2 PF08112.11 NODE_87511_length_183_cov_3.101351_g79570_i0reverse_frame_2 - 0.14 12.4 1.9 1.6 9.1 0.1 2.2 1 1 1 2 2 2 0 ATP synthase epsilon subunit Csm1_B PF18211.1 NODE_87507_length_183_cov_3.236486_g79566_i0reverse_frame_2 - 0.05 13.4 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Csm1 subunit domain B DUF997 PF06196.12 NODE_87500_length_183_cov_3.729730_g79559_i0reverse_frame_3 - 0.17 11.9 1.2 0.28 11.2 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF997) DUF2205 PF10224.9 NODE_87500_length_183_cov_3.729730_g79559_i0forward_frame_3 - 0.006 16.6 0.4 0.0075 16.2 0.4 1.1 1 0 0 1 1 1 1 Short coiled-coil protein YabA PF06156.13 NODE_87500_length_183_cov_3.729730_g79559_i0forward_frame_3 - 0.026 15.2 0.1 0.032 14.9 0.1 1.2 1 0 0 1 1 1 0 Initiation control protein YabA Fer4_24 PF18109.1 NODE_87500_length_183_cov_3.729730_g79559_i0forward_frame_3 - 0.061 13.6 0.1 0.099 12.9 0.1 1.3 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain Man-6-P_recep PF02157.15 NODE_87486_length_183_cov_12.513514_g79545_i0reverse_frame_3 - 0.052 12.6 0.3 0.055 12.6 0.3 1.0 1 0 0 1 1 1 0 Mannose-6-phosphate receptor HEPN_Toprim_N PF18871.1 NODE_87486_length_183_cov_12.513514_g79545_i0forward_frame_2 - 0.024 14.5 0.4 0.026 14.4 0.4 1.0 1 0 0 1 1 1 0 HEPN/Toprim N-terminal domain 1 Toxin_28 PF08115.11 NODE_87485_length_183_cov_17.148649_g79544_i0forward_frame_3 - 0.084 12.7 4.1 0.12 12.2 4.1 1.2 1 0 0 1 1 1 0 SFI toxin family DUF1983 PF09327.11 NODE_87484_length_183_cov_17.418919_g79543_i0reverse_frame_2 - 0.1 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1983) GCSF PF16647.5 NODE_87482_length_183_cov_19.391892_g79541_i0reverse_frame_3 - 0.075 12.9 0.1 0.09 12.6 0.1 1.1 1 0 0 1 1 1 0 Granulocyte colony-stimulating factor UL20 PF17582.2 NODE_87481_length_183_cov_20.547297_g79540_i0reverse_frame_2 - 0.1 11.9 0.4 0.097 11.9 0.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 Ribosomal_S18 PF01084.20 NODE_87477_length_183_cov_22.878378_g79536_i0reverse_frame_3 - 0.068 13.4 0.0 0.093 13.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S18 EFhand_Ca_insen PF08726.10 NODE_87477_length_183_cov_22.878378_g79536_i0forward_frame_2 - 0.013 15.6 0.0 0.017 15.2 0.0 1.1 1 0 0 1 1 1 0 Ca2+ insensitive EF hand DUF3884 PF13024.6 NODE_87476_length_183_cov_23.222973_g79535_i0reverse_frame_3 - 0.024 14.2 0.0 0.03 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) zf_C2HC_14 PF18574.1 NODE_87476_length_183_cov_23.222973_g79535_i0reverse_frame_2 - 0.024 14.4 0.0 0.035 13.9 0.0 1.2 1 0 0 1 1 1 0 C2HC Zing finger domain DUF1508 PF07411.12 NODE_87476_length_183_cov_23.222973_g79535_i0forward_frame_2 - 0.15 11.9 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1508) RNA_polI_A34 PF08208.11 NODE_87475_length_183_cov_23.310811_g79534_i0reverse_frame_2 - 1.4 9.0 13.0 1.6 8.8 13.0 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Vps62 PF06101.11 NODE_87466_length_183_cov_29.993243_g79525_i0reverse_frame_3 - 0.015 13.6 0.1 0.015 13.6 0.1 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 62 MAT1-1-2 PF17043.5 NODE_87466_length_183_cov_29.993243_g79525_i0reverse_frame_2 - 0.045 13.6 0.3 0.047 13.5 0.3 1.1 1 0 0 1 1 1 0 Mating type protein 1-1-2 of unknown function HopA1 PF17914.1 NODE_87459_length_183_cov_34.195946_g79518_i0forward_frame_2 - 0.18 11.5 0.1 0.2 11.4 0.1 1.0 1 0 0 1 1 1 0 HopA1 effector protein family Urate_ox_N PF06181.11 NODE_87454_length_183_cov_35.283784_g79513_i0forward_frame_3 - 0.26 10.6 0.0 0.28 10.5 0.0 1.0 1 0 0 1 1 1 0 Urate oxidase N-terminal Ribosomal_S19e PF01090.19 NODE_87451_length_183_cov_37.168919_g79510_i0reverse_frame_2 - 0.026 14.2 0.1 0.027 14.2 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein S19e DUF697 PF05128.12 NODE_87451_length_183_cov_37.168919_g79510_i0reverse_frame_2 - 0.13 12.0 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF697) Selenoprotein_S PF06936.11 NODE_87451_length_183_cov_37.168919_g79510_i0forward_frame_3 - 0.1 12.4 0.1 0.12 12.2 0.1 1.0 1 0 0 1 1 1 0 Selenoprotein S (SelS) NR_Repeat PF14046.6 NODE_87443_length_183_cov_42.878378_g79502_i0reverse_frame_3 - 0.01 15.9 0.8 0.012 15.7 0.8 1.2 1 0 0 1 1 1 0 Nuclear receptor repeat Phage_P2_GpE PF06528.12 NODE_87438_length_183_cov_47.614865_g79497_i0reverse_frame_2 - 0.18 11.4 1.3 0.26 10.9 1.3 1.2 1 0 0 1 1 1 0 Phage P2 GpE Pex2_Pex12 PF04757.14 NODE_87438_length_183_cov_47.614865_g79497_i0forward_frame_3 - 0.25 10.9 1.4 0.25 10.9 1.4 1.1 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region Paf1 PF03985.13 NODE_87436_length_183_cov_48.641892_g79495_i0reverse_frame_2 - 0.045 12.8 0.3 0.049 12.6 0.3 1.0 1 0 0 1 1 1 0 Paf1 Chordopox_A30L PF06015.12 NODE_87434_length_183_cov_52.851351_g79493_i0reverse_frame_2 - 0.0078 16.0 2.6 0.14 12.0 0.1 2.1 1 1 1 2 2 2 2 Chordopoxvirus A30L protein CHORD PF04968.12 NODE_87427_length_183_cov_55.317568_g79486_i0reverse_frame_3 - 0.085 13.6 2.0 0.1 13.3 2.0 1.3 1 1 0 1 1 1 0 CHORD Op_neuropeptide PF08035.11 NODE_87427_length_183_cov_55.317568_g79486_i0reverse_frame_2 - 0.039 13.8 0.1 0.06 13.2 0.1 1.3 1 0 0 1 1 1 0 Opioids neuropeptide Nmad4 PF18756.1 NODE_87421_length_183_cov_63.547297_g79480_i0forward_frame_3 - 0.17 12.2 0.0 0.19 12.1 0.0 1.0 1 0 0 1 1 1 0 Nucleotide modification associated domain 4 DUF2628 PF10947.8 NODE_87421_length_183_cov_63.547297_g79480_i0forward_frame_2 - 0.029 14.7 0.3 0.029 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) HTH_Tnp_IS1 PF12759.7 NODE_87416_length_183_cov_82.824324_g79475_i0forward_frame_2 - 0.047 13.3 0.0 0.079 12.6 0.0 1.3 1 0 0 1 1 1 0 InsA C-terminal domain DUF5133 PF17196.4 NODE_87413_length_183_cov_98.966216_g79472_i0reverse_frame_2 - 0.098 12.9 1.0 0.28 11.4 0.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF5133) NACHT PF05729.12 NODE_87407_length_183_cov_116.837838_g79466_i0forward_frame_2 - 0.17 11.8 0.4 0.19 11.6 0.4 1.0 1 0 0 1 1 1 0 NACHT domain VDE PF07137.11 NODE_87402_length_183_cov_166.864865_g79461_i0reverse_frame_3 - 0.081 12.4 0.0 0.084 12.4 0.0 1.0 1 0 0 1 1 1 0 VDE lipocalin domain Peptidase_C3G PF12381.8 NODE_87402_length_183_cov_166.864865_g79461_i0reverse_frame_3 - 0.087 12.3 0.0 0.1 12.0 0.0 1.0 1 0 0 1 1 1 0 Tungro spherical virus-type peptidase Arginosuc_synth PF00764.19 NODE_87390_length_183_cov_556.837838_g79449_i0reverse_frame_2 - 0.23 10.7 0.0 0.27 10.5 0.0 1.0 1 0 0 1 1 1 0 Arginosuccinate synthase GPR_Gpa2_C PF11970.8 NODE_87388_length_183_cov_1592.716216_g79447_i0forward_frame_3 - 0.054 13.6 2.5 0.064 13.3 2.5 1.2 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term Ribosomal_L31e PF01198.19 NODE_87387_length_183_cov_1794.587838_g79446_i0reverse_frame_3 - 1.9e-09 37.6 0.4 2.7e-09 37.1 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L31e DUF3464 PF11947.8 NODE_87386_length_183_cov_4590.047297_g79445_i0reverse_frame_3 - 1.7 8.4 6.6 1.9 8.2 6.6 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Pex24p PF06398.11 NODE_87386_length_183_cov_4590.047297_g79445_i0forward_frame_2 - 1.9 7.4 4.5 2.1 7.2 4.5 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Pox_G5 PF04599.12 ORF99911 - 0.053 12.5 0.0 0.053 12.5 0.0 1.0 1 0 0 1 1 1 0 Poxvirus G5 protein TEA PF01285.18 ORF99911 - 1 9.5 3.9 1.5 9.0 3.9 1.2 1 0 0 1 1 1 0 TEA/ATTS domain PHD_like PF12910.7 ORF99903 - 0.044 13.8 0.1 0.044 13.8 0.1 1.1 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system Pou PF00157.17 ORF99840 - 0.076 13.0 0.1 0.17 11.9 0.0 1.6 2 0 0 2 2 2 0 Pou domain - N-terminal to homeobox domain FAST_1 PF06743.15 ORF99380 - 0.075 13.0 0.0 0.093 12.7 0.0 1.2 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 1 SelR PF01641.18 ORF9896 - 1.1e-16 61.0 0.1 1.2e-16 60.9 0.1 1.0 1 0 0 1 1 1 1 SelR domain DUF2718 PF10918.8 ORF98557 - 0.7 10.4 4.7 0.77 10.3 4.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2718) SR-25 PF10500.9 ORF98434 - 8.4 5.9 20.2 8.6 5.9 20.2 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein MIP PF00230.20 ORF97951 - 3.9e-09 36.6 1.1 4.3e-09 36.4 1.1 1.0 1 0 0 1 1 1 1 Major intrinsic protein TRP PF06011.12 ORF97664 - 0.042 12.6 0.6 0.044 12.5 0.6 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel dbPDZ_assoc PF16610.5 ORF97657 - 0.19 11.9 2.7 0.23 11.7 2.4 1.4 1 1 0 1 1 1 0 Unstructured region between two PDZ domains on Dlg5 DUF3094 PF11293.8 ORF97412 - 0.046 13.4 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) Sfi1 PF08457.10 ORF9736 - 0.085 11.4 0.0 0.094 11.2 0.0 1.0 1 0 0 1 1 1 0 Sfi1 spindle body protein TMEM51 PF15345.6 ORF97127 - 0.13 12.0 0.6 0.13 12.1 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 Ras PF00071.22 ORF96917 - 0.0002 21.0 0.1 0.00024 20.8 0.1 1.1 1 0 0 1 1 1 1 Ras family Mito_carr PF00153.27 ORF96914 - 0.033 14.1 0.0 0.035 14.0 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial carrier protein DUF3019 PF11456.8 ORF96854 - 0.021 15.3 0.4 0.024 15.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3019) DUF2560 PF10834.8 ORF96790 - 0.09 13.0 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2560) FeS PF04060.13 ORF9618 - 0.064 12.9 0.3 0.17 11.6 0.1 1.7 2 0 0 2 2 2 0 Putative Fe-S cluster LpxI_N PF17930.1 ORF96018 - 0.024 14.5 0.1 0.024 14.5 0.1 1.1 1 0 0 1 1 1 0 LpxI N-terminal domain AveC_like PF17198.4 ORF95571 - 0.073 12.5 0.8 0.088 12.2 0.8 1.0 1 0 0 1 1 1 0 Spirocyclase AveC-like Bac_GDH PF05088.12 ORF95546 - 0.14 9.6 0.2 0.14 9.6 0.2 1.0 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase DUF1067 PF06362.11 ORF95499 - 0.043 14.6 0.1 0.043 14.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1067) DpnI_C PF17726.1 ORF9528 - 0.0016 18.6 1.3 0.002 18.2 1.3 1.4 1 0 0 1 1 1 1 Dam-replacing HTH domain Blo-t-5 PF11642.8 ORF95237 - 0.13 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Mite allergen Blo t 5 DSPc PF00782.20 ORF95224 - 8.6e-08 32.1 0.0 9.9e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PgdA_N PF18627.1 ORF94914 - 0.029 14.0 0.7 0.031 13.9 0.7 1.0 1 0 0 1 1 1 0 Peptidoglycan GlcNAc deacetylase N-terminal domain Lipase_chap PF03280.14 ORF94652 - 0.0082 16.1 1.1 0.0093 15.9 1.1 1.0 1 0 0 1 1 1 1 Proteobacterial lipase chaperone protein DUF1143 PF06608.11 ORF94614 - 0.014 15.4 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) SSTK-IP PF15836.5 ORF94527 - 0.014 15.5 0.5 0.017 15.3 0.5 1.1 1 0 0 1 1 1 0 SSTK-interacting protein, TSSK6-activating co-chaperone protein BING4CT PF08149.11 ORF93718 - 0.023 14.5 0.0 0.025 14.4 0.0 1.1 1 0 0 1 1 1 0 BING4CT (NUC141) domain DTHCT PF08070.11 ORF93338 - 0.0032 18.2 1.5 0.0035 18.0 1.5 1.0 1 0 0 1 1 1 1 DTHCT (NUC029) region Shugoshin_C PF07557.11 ORF93338 - 0.013 15.3 1.4 0.013 15.3 1.4 1.8 2 0 0 2 2 2 0 Shugoshin C terminus dbPDZ_assoc PF16610.5 ORF92838 - 0.19 11.9 2.7 0.23 11.7 2.4 1.4 1 1 0 1 1 1 0 Unstructured region between two PDZ domains on Dlg5 PPR_3 PF13812.6 ORF92700 - 0.033 14.3 0.7 0.036 14.1 0.7 1.1 1 0 0 1 1 1 0 Pentatricopeptide repeat domain AP3D1 PF06375.11 ORF92381 - 4.5 7.5 16.0 4.8 7.4 16.0 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Tn916-Xis PF09035.10 ORF92293 - 0.14 12.3 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Excisionase from transposon Tn916 Selenoprotein_S PF06936.11 ORF92212 - 0.23 11.3 4.1 0.27 11.0 4.1 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) Synaptobrevin PF00957.21 ORF92143 - 0.02 14.7 0.8 0.024 14.4 0.8 1.1 1 0 0 1 1 1 0 Synaptobrevin DSPc PF00782.20 ORF92115 - 0.00012 21.9 0.1 0.00019 21.3 0.0 1.3 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain DUF1289 PF06945.13 ORF9211 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) LMBR1 PF04791.16 ORF92079 - 0.012 14.6 0.1 0.013 14.5 0.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein STAG PF08514.11 ORF91993 - 0.17 11.8 2.0 0.19 11.6 2.0 1.1 1 0 0 1 1 1 0 STAG domain Lep_receptor_Ig PF06328.11 ORF91968 - 0.074 13.0 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain DUF2090 PF09863.9 ORF91898 - 0.2 10.6 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2090) Ras PF00071.22 ORF9179 - 5.8e-05 22.7 0.1 6.9e-05 22.5 0.1 1.1 1 0 0 1 1 1 1 Ras family Ferrochelatase PF00762.19 ORF91772 - 0.022 13.8 0.0 0.023 13.8 0.0 1.0 1 0 0 1 1 1 0 Ferrochelatase PP2C PF00481.21 ORF91156 - 4e-18 66.0 0.1 4.1e-18 65.9 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DUF4298 PF14131.6 ORF91156 - 0.048 13.6 0.1 0.052 13.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) tRNA-synt_2 PF00152.20 ORF90910 - 5.2e-17 61.9 0.0 5.4e-17 61.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF90910 - 0.00051 19.6 0.0 0.00055 19.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Sec62 PF03839.16 ORF9039 - 7.2 6.1 12.2 7.3 6.0 12.2 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Fer4 PF00037.27 ORF89906 - 7.3e-07 28.7 1.9 1.1e-06 28.2 1.9 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_7 PF12838.7 ORF89906 - 1.2e-05 25.8 0.2 1.3e-05 25.7 0.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF89906 - 2e-05 25.0 0.6 2.6e-05 24.7 0.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF89906 - 2.8e-05 24.1 0.3 3.6e-05 23.8 0.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF89906 - 4.2e-05 23.6 0.4 4.4e-05 23.6 0.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF89906 - 7.1e-05 22.9 1.1 8.9e-05 22.5 1.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF89906 - 7.3e-05 23.0 1.3 9.6e-05 22.6 1.3 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_6 PF12837.7 ORF89906 - 0.00012 22.0 2.6 0.00018 21.5 2.6 1.3 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_8 PF13183.6 ORF89906 - 0.00022 21.6 0.3 0.00022 21.6 0.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF89906 - 0.00038 21.3 0.2 0.00051 20.9 0.2 1.3 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 ORF89906 - 0.00074 20.3 0.5 0.00091 20.0 0.5 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF89906 - 0.0017 18.3 5.6 0.0027 17.7 5.6 1.3 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_18 PF13746.6 ORF89906 - 0.005 17.0 0.4 0.0053 16.9 0.4 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF89906 - 0.067 14.2 4.9 0.098 13.6 4.9 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain Crust_neurohorm PF01147.17 ORF8976 - 0.049 13.5 0.4 0.06 13.2 0.4 1.1 1 0 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family DUF2691 PF10903.8 ORF8976 - 0.067 13.1 1.4 0.075 12.9 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2691) HSP9_HSP12 PF04119.12 ORF8976 - 0.17 12.3 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 Heat shock protein 9/12 RNaseH_like PF04308.12 ORF89469 - 0.18 11.7 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease H-like DUF4346 PF14251.6 ORF89464 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4346) LIF_OSM PF01291.17 ORF89161 - 0.075 13.2 0.0 0.075 13.2 0.0 1.0 1 0 0 1 1 1 0 LIF / OSM family TLP1_add_C PF18313.1 ORF89071 - 0.11 12.4 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Thiolase-like protein type 1 additional C-terminal domain DUF3487 PF11990.8 ORF88730 - 4.9 7.1 16.2 5.5 6.9 16.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) Hint PF01079.20 ORF88475 - 0.044 13.3 0.0 0.052 13.1 0.0 1.0 1 0 0 1 1 1 0 Hint module Ribosomal_S21 PF01165.20 ORF88296 - 0.029 14.1 0.0 0.038 13.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S21 DUF2457 PF10446.9 ORF87947 - 9.1 5.3 6.2 8.9 5.3 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Hint PF01079.20 ORF87820 - 0.044 13.3 0.0 0.052 13.1 0.0 1.0 1 0 0 1 1 1 0 Hint module Ferrochelatase PF00762.19 ORF87781 - 0.022 13.8 0.0 0.023 13.8 0.0 1.0 1 0 0 1 1 1 0 Ferrochelatase DUF3937 PF13073.6 ORF87287 - 0.2 11.8 0.0 0.23 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3937) Vps51 PF08700.11 ORF87206 - 0.05 13.7 0.3 0.059 13.5 0.3 1.1 1 0 0 1 1 1 0 Vps51/Vps67 DUF3926 PF13080.6 ORF85920 - 0.016 15.1 1.0 0.026 14.4 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3926) Flu_NS2 PF00601.19 ORF85920 - 0.017 15.4 0.3 0.025 14.8 0.3 1.3 1 0 0 1 1 1 0 Influenza non-structural protein (NS2) NPA PF16469.5 ORF85920 - 0.035 14.7 3.0 0.043 14.4 3.0 1.1 1 0 0 1 1 1 0 Nematode polyprotein allergen ABA-1 DUF5395 PF17373.2 ORF85920 - 0.052 14.2 0.8 0.055 14.1 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5395) DASH_Dam1 PF08653.10 ORF85920 - 0.084 12.7 2.8 0.36 10.7 0.5 2.1 1 1 1 2 2 2 0 DASH complex subunit Dam1 Orthopox_F8 PF05886.11 ORF85429 - 0.087 13.0 0.6 0.14 12.3 0.6 1.4 1 0 0 1 1 1 0 Orthopoxvirus F8 protein Vps36-NZF-N PF16988.5 ORF85208 - 0.055 12.9 0.7 0.075 12.4 0.7 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain PXB PF12828.7 ORF84790 - 0.055 13.5 0.1 0.062 13.3 0.1 1.1 1 0 0 1 1 1 0 PX-associated PPDFL PF15060.6 ORF84639 - 0.07 13.7 0.7 0.086 13.4 0.7 1.2 1 0 0 1 1 1 0 Differentiation and proliferation regulator Phage_int_SAM_5 PF13102.6 ORF84263 - 0.0016 18.7 0.7 0.002 18.4 0.7 1.2 1 0 0 1 1 1 1 Phage integrase SAM-like domain DUSP PF06337.12 ORF84263 - 0.051 14.2 0.1 0.056 14.1 0.1 1.1 1 0 0 1 1 1 0 DUSP domain Ac81 PF05820.11 ORF84185 - 0.53 9.8 9.5 0.54 9.8 9.5 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 K-cyclin_vir_C PF09080.10 ORF83640 - 0.06 13.8 0.2 0.063 13.7 0.2 1.1 1 0 0 1 1 1 0 K cyclin, C terminal AstA PF04958.12 ORF83603 - 0.046 12.3 0.1 0.05 12.2 0.1 1.0 1 0 0 1 1 1 0 Arginine N-succinyltransferase beta subunit Mito_carr PF00153.27 ORF83435 - 2.7e-06 27.2 0.0 3.2e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF4181 PF13789.6 ORF83435 - 0.048 13.9 0.1 0.057 13.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) KDZ PF18758.1 ORF83307 - 0.15 11.6 0.0 0.16 11.6 0.0 1.0 1 0 0 1 1 1 0 Kyakuja-Dileera-Zisupton transposase DUF5403 PF17395.2 ORF8328 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) Vac14_Fig4_bd PF11916.8 ORF83153 - 0.051 13.2 0.0 0.051 13.2 0.0 1.0 1 0 0 1 1 1 0 Vacuolar protein 14 C-terminal Fig4p binding RPN2_C PF18004.1 ORF82938 - 0.032 14.1 0.4 0.032 14.1 0.4 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain MAAL_C PF07476.11 ORF82930 - 0.084 12.0 0.0 0.089 11.9 0.0 1.0 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Matrilin_ccoil PF10393.9 ORF82817 - 0.04 13.8 0.2 0.053 13.4 0.2 1.2 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin KASH_CCD PF14662.6 ORF82817 - 0.041 13.7 0.1 0.044 13.6 0.1 1.0 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH Herpes_U15 PF05613.11 ORF82674 - 0.047 14.4 1.4 0.043 14.5 1.4 1.1 1 0 0 1 1 1 0 Human herpesvirus U15 protein zf-Tim10_DDP PF02953.15 ORF8260 - 0.032 13.9 0.1 0.033 13.8 0.1 1.2 1 0 0 1 1 1 0 Tim10/DDP family zinc finger PH_RBD PF12068.8 ORF8260 - 0.032 13.7 0.2 0.032 13.7 0.2 1.0 1 0 0 1 1 1 0 Rab-binding domain (RBD) S100PBPR PF15427.6 ORF82535 - 0.088 12.1 0.2 0.092 12.0 0.2 1.0 1 0 0 1 1 1 0 S100P-binding protein Herpes_LAMP2 PF06126.11 ORF82491 - 0.025 13.2 0.5 0.026 13.2 0.5 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 Matrilin_ccoil PF10393.9 ORF82369 - 0.04 13.8 0.2 0.053 13.4 0.2 1.2 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin KASH_CCD PF14662.6 ORF82369 - 0.041 13.7 0.1 0.044 13.6 0.1 1.0 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH LpxI_N PF17930.1 ORF82283 - 0.024 14.5 0.1 0.024 14.5 0.1 1.1 1 0 0 1 1 1 0 LpxI N-terminal domain DUF2939 PF11159.8 ORF82032 - 0.021 15.2 0.0 0.024 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2939) Antibiotic_NAT PF02522.14 ORF81371 - 0.13 12.0 0.0 0.13 12.0 0.0 1.0 1 0 0 1 1 1 0 Aminoglycoside 3-N-acetyltransferase Vps36_ESCRT-II PF11605.8 ORF81343 - 0.0052 16.9 0.1 0.006 16.7 0.1 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting protein 36 Vps36 BBL5 PF07289.11 ORF81343 - 0.021 13.9 0.0 0.021 13.9 0.0 1.0 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein PapC_N PF13954.6 ORF81103 - 0.013 15.5 0.0 0.015 15.3 0.0 1.0 1 0 0 1 1 1 0 PapC N-terminal domain MPTase-PolyVal PF18818.1 ORF81103 - 0.071 13.2 0.0 0.081 13.0 0.0 1.0 1 0 0 1 1 1 0 Metallopeptidase superfamily domain HtrL_YibB PF09612.10 ORF80516 - 0.097 12.2 0.1 0.1 12.1 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (HtrL_YibB) zf-RING_2 PF13639.6 ORF80398 - 8.1e-11 42.1 2.3 1.1e-10 41.7 2.3 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF80398 - 7.4e-10 38.5 2.5 9e-10 38.2 2.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF80398 - 3.1e-09 37.0 3.9 4.3e-09 36.5 3.9 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain Prok-RING_4 PF14447.6 ORF80398 - 8.7e-08 31.9 2.1 1.2e-07 31.4 2.1 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF80398 - 9.5e-07 28.7 1.1 1.5e-06 28.1 1.1 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF80398 - 2.3e-06 27.4 1.2 3.1e-06 27.0 1.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF80398 - 3.5e-06 26.7 0.2 3.5e-06 26.7 0.2 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF80398 - 4.7e-06 26.5 1.0 4.7e-06 26.5 1.0 1.8 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF80398 - 2.7e-05 24.0 0.9 3.9e-05 23.4 0.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF80398 - 7.4e-05 22.7 0.4 0.00012 22.1 0.4 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF80398 - 8.4e-05 22.1 1.4 0.00012 21.6 1.4 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF80398 - 0.0012 18.9 1.6 0.0067 16.6 1.9 1.8 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF80398 - 0.0069 16.2 0.5 0.0096 15.7 0.5 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Rad50_zn_hook PF04423.14 ORF80398 - 0.0094 15.8 0.6 0.012 15.4 0.6 1.3 1 0 0 1 1 1 1 Rad50 zinc hook motif zf-RING-like PF08746.11 ORF80398 - 0.031 14.6 1.7 0.053 13.8 1.7 1.4 1 0 0 1 1 1 0 RING-like domain FANCL_C PF11793.8 ORF80398 - 0.037 14.2 1.7 0.47 10.7 1.7 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain UPF0547 PF10571.9 ORF80398 - 0.054 13.6 4.3 0.52 10.4 0.5 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_16 PF17034.5 ORF80398 - 0.08 13.2 2.6 0.087 13.0 2.2 1.3 1 1 0 1 1 1 0 Zinc-ribbon like family PHD PF00628.29 ORF80398 - 0.082 12.8 3.9 0.17 11.8 3.8 1.6 1 1 0 1 1 1 0 PHD-finger zf-C3H2C3 PF17122.5 ORF80398 - 0.15 12.1 5.1 0.33 11.0 5.1 1.5 1 1 0 1 1 1 0 Zinc-finger cIII PF08134.11 ORF80034 - 0.017 14.9 0.5 0.027 14.2 0.5 1.4 1 0 0 1 1 1 0 cIII protein family BLOC1_2 PF10046.9 ORF79938 - 0.024 14.9 1.0 0.048 14.0 0.5 1.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF5409 PF17421.2 ORF79679 - 0.012 16.3 0.6 0.014 16.0 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks423.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks423.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks423.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks423.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:30:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1289 PF06945.13 ORF78945 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) Ribosomal_L23 PF00276.20 ORF78907 - 0.044 14.2 0.0 0.05 14.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L23 Corona_5a PF06336.11 ORF78907 - 0.055 13.5 0.4 0.065 13.2 0.4 1.1 1 0 0 1 1 1 0 Coronavirus 5a protein Lac_bphage_repr PF06543.12 ORF78858 - 0.14 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor Sigma_reg_N PF13800.6 ORF78129 - 0.003 17.8 1.9 0.0033 17.7 1.9 1.1 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF5385 PF17359.2 ORF78129 - 0.54 9.8 1.0 0.62 9.6 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) MRAP PF15183.6 ORF77849 - 0.0026 17.7 0.1 0.0029 17.5 0.1 1.1 1 0 0 1 1 1 1 Melanocortin-2 receptor accessory protein family MRPL52 PF18699.1 ORF76415 - 0.014 15.5 0.9 0.019 15.2 0.9 1.2 1 0 0 1 1 1 0 Mitoribosomal protein mL52 DUF5096 PF17019.5 ORF76415 - 0.099 12.4 5.3 0.1 12.4 5.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5096) TT_ORF1 PF02956.14 ORF7639 - 4.2 5.9 7.5 4.7 5.8 7.5 1.0 1 0 0 1 1 1 0 TT viral orf 1 MIP PF00230.20 ORF75853 - 3.9e-09 36.6 1.1 4.3e-09 36.4 1.1 1.0 1 0 0 1 1 1 1 Major intrinsic protein SAYSvFN PF10260.9 ORF75696 - 0.064 13.2 0.2 0.085 12.8 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved domain (SAYSvFN) Las1 PF04031.13 ORF75675 - 0.049 13.7 0.4 0.05 13.7 0.4 1.1 1 0 0 1 1 1 0 Las1-like DUF2547 PF10818.8 ORF75675 - 0.65 11.0 3.8 0.7 10.9 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) zf-C2H2_4 PF13894.6 ORF74967 - 0.0031 18.2 1.0 0.0047 17.7 1.0 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-3CxxC PF13695.6 ORF74967 - 0.012 16.0 0.2 0.015 15.8 0.2 1.1 1 0 0 1 1 1 0 Zinc-binding domain Rad50_zn_hook PF04423.14 ORF74967 - 0.018 14.8 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif zf_UBZ PF18439.1 ORF74967 - 0.032 13.8 0.3 0.05 13.2 0.3 1.3 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf-RING_4 PF14570.6 ORF74967 - 0.044 13.6 0.0 0.067 13.0 0.0 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-H2C2_2 PF13465.6 ORF74967 - 0.061 13.8 0.4 0.097 13.1 0.1 1.5 2 0 0 2 2 2 0 Zinc-finger double domain DUF3918 PF13056.6 ORF74560 - 0.078 12.6 0.8 0.1 12.2 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) BLOC1_2 PF10046.9 ORF7410 - 0.024 14.9 1.0 0.048 14.0 0.5 1.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 W_rich_C PF07483.11 ORF7394 - 0.069 13.3 0.3 0.2 11.8 0.4 1.6 1 1 1 2 2 2 0 Tryptophan-rich Synechocystis species C-terminal domain Ferrochelatase PF00762.19 ORF73682 - 0.022 13.8 0.0 0.023 13.8 0.0 1.0 1 0 0 1 1 1 0 Ferrochelatase PPTA PF01239.22 ORF73346 - 0.17 11.6 0.1 0.25 11.1 0.1 1.2 1 0 0 1 1 1 0 Protein prenyltransferase alpha subunit repeat Antimicrobial_7 PF08102.11 ORF72775 - 0.036 14.3 0.2 0.061 13.6 0.2 1.4 1 0 0 1 1 1 0 Scorpion antimicrobial peptide FAS_N PF17828.1 ORF72499 - 0.075 13.0 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta Yop-YscD_ppl PF16693.5 ORF72111 - 0.05 13.0 0.5 0.05 13.0 0.5 1.0 1 0 0 1 1 1 0 Inner membrane component of T3SS, periplasmic domain Apyrase PF06079.11 ORF72037 - 0.038 13.2 0.1 0.039 13.2 0.1 1.0 1 0 0 1 1 1 0 Apyrase Gp58 PF07902.11 ORF72037 - 0.088 11.1 1.9 0.097 10.9 1.9 1.0 1 0 0 1 1 1 0 gp58-like protein muHD PF10291.9 ORF71925 - 0.12 11.8 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 Muniscin C-terminal mu homology domain FUSC PF04632.12 ORF71718 - 0.093 11.3 0.3 0.097 11.2 0.3 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family SesA PF17107.5 ORF717 - 0.1 12.8 1.2 0.36 11.0 1.2 1.8 1 1 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases LysE PF01810.18 ORF71617 - 3.7e-11 42.8 3.6 4e-11 42.7 3.6 1.0 1 0 0 1 1 1 1 LysE type translocator Defensin_5 PF18251.1 ORF71610 - 0.79 9.9 5.2 8.6 6.5 0.4 2.7 2 1 1 3 3 3 0 Fungal defensin Copsin DUF3339 PF11820.8 ORF71465 - 0.17 12.1 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3339) Synaptobrevin PF00957.21 ORF71176 - 0.02 14.7 0.8 0.024 14.4 0.8 1.1 1 0 0 1 1 1 0 Synaptobrevin DUF3094 PF11293.8 ORF71097 - 0.046 13.4 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) zf-C3HC4_2 PF13923.6 ORF70925 - 2.4e-05 24.1 5.2 3.4e-05 23.6 5.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF70925 - 3e-05 24.2 2.4 3.3e-05 24.1 2.4 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF70925 - 3.6e-05 24.0 3.8 4.7e-05 23.6 3.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF70925 - 0.011 15.5 9.2 0.011 15.5 9.2 1.5 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF70653 - 0.91 9.6 6.1 1.7 8.7 6.1 1.6 1 1 0 1 1 1 0 RING-type zinc-finger Hexapep_2 PF14602.6 ORF70354 - 8.6e-06 25.4 0.6 0.0015 18.2 0.0 2.3 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 ORF70354 - 3.7e-05 23.3 0.4 0.081 12.7 0.0 2.5 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) DUF1289 PF06945.13 ORF70278 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) YfkD PF14167.6 ORF70185 - 0.12 11.5 0.0 0.14 11.3 0.0 1.2 1 1 0 1 1 1 0 YfkD-like protein T3SS_TC PF06511.11 ORF69906 - 0.12 11.8 0.3 0.13 11.7 0.3 1.0 1 0 0 1 1 1 0 Type III secretion systems tip complex components Hint PF01079.20 ORF69438 - 0.044 13.3 0.0 0.052 13.1 0.0 1.0 1 0 0 1 1 1 0 Hint module DUF3579 PF12112.8 ORF68871 - 0.064 13.8 0.0 0.16 12.6 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3579) zf-MYST PF17772.1 ORF68289 - 0.011 15.4 0.1 4.1 7.1 0.0 2.1 2 0 0 2 2 2 0 MYST family zinc finger domain DUF641 PF04859.12 ORF6817 - 0.078 13.3 5.3 0.081 13.3 5.3 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) FAM76 PF16046.5 ORF6817 - 0.25 10.7 5.8 0.25 10.7 5.8 1.0 1 0 0 1 1 1 0 FAM76 protein DUF1289 PF06945.13 ORF67914 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) DUF1289 PF06945.13 ORF67322 - 0.068 13.0 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) Glyco_hydro_42C PF08533.10 ORF67304 - 0.028 14.1 0.6 0.044 13.5 0.6 1.3 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain YtpI PF14007.6 ORF67089 - 0.016 15.3 0.8 0.018 15.2 0.8 1.2 1 0 0 1 1 1 0 YtpI-like protein Cytochrom_NNT PF03264.14 ORF67089 - 0.18 11.5 1.1 0.21 11.3 1.1 1.1 1 0 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region DUF3270 PF11674.8 ORF6700 - 0.85 9.8 4.6 0.55 10.5 1.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3270) DUF5388 PF17363.2 ORF66340 - 0.026 14.7 0.0 0.029 14.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5388) Gyro_capsid PF04162.12 ORF66158 - 1.6 7.1 6.1 1.7 7.0 6.1 1.0 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) DUF5403 PF17395.2 ORF65545 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) DUF5403 PF17395.2 ORF65543 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) SNF PF00209.18 ORF65385 - 5.6e-08 31.9 0.1 5.6e-08 31.9 0.1 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF443 PF04276.12 ORF64887 - 0.0024 17.7 0.6 0.0024 17.7 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF443) DUF1289 PF06945.13 ORF64874 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) HDA2-3 PF11496.8 ORF64562 - 0.23 10.6 0.0 0.23 10.6 0.0 1.0 1 0 0 1 1 1 0 Class II histone deacetylase complex subunits 2 and 3 Cons_hypoth698 PF03601.14 ORF64487 - 0.021 13.7 0.9 0.02 13.8 0.9 1.0 1 0 0 1 1 1 0 Conserved hypothetical protein 698 zf-C2H2_4 PF13894.6 ORF63959 - 0.0031 18.2 1.0 0.0047 17.7 1.0 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-3CxxC PF13695.6 ORF63959 - 0.012 16.0 0.2 0.015 15.8 0.2 1.1 1 0 0 1 1 1 0 Zinc-binding domain Rad50_zn_hook PF04423.14 ORF63959 - 0.018 14.8 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif zf_UBZ PF18439.1 ORF63959 - 0.032 13.8 0.3 0.05 13.2 0.3 1.3 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf-RING_4 PF14570.6 ORF63959 - 0.044 13.6 0.0 0.067 13.0 0.0 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-H2C2_2 PF13465.6 ORF63959 - 0.061 13.8 0.4 0.097 13.1 0.1 1.5 2 0 0 2 2 2 0 Zinc-finger double domain HRCT1 PF15758.5 ORF63614 - 0.0016 19.4 1.5 0.0016 19.3 1.5 1.2 1 0 0 1 1 1 1 Histidine-rich carboxyl terminus protein 1 zf-H2C2_2 PF13465.6 ORF63592 - 9.7e-08 32.1 1.3 3.7e-05 23.9 0.6 2.2 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF63592 - 6.8e-06 26.3 0.9 1.3e-05 25.4 0.9 1.5 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF63592 - 0.00029 21.4 0.7 0.0006 20.4 0.7 1.6 1 0 0 1 1 1 1 C2H2-type zinc finger FOXP-CC PF16159.5 ORF63592 - 0.0011 19.5 0.1 0.0013 19.4 0.1 1.1 1 0 0 1 1 1 1 FOXP coiled-coil domain zf-H2C2_5 PF13909.6 ORF63592 - 1.2 9.0 0.1 1.2 9.0 0.1 2.5 3 0 0 3 3 3 0 C2H2-type zinc-finger domain Cyclin_N PF00134.23 ORF63560 - 0.089 12.5 0.0 0.097 12.4 0.0 1.0 1 0 0 1 1 1 0 Cyclin, N-terminal domain Cyclin PF08613.11 ORF63560 - 0.1 13.0 0.0 0.1 12.9 0.0 1.0 1 0 0 1 1 1 0 Cyclin PhnI PF05861.12 ORF63188 - 0.019 13.8 0.1 0.02 13.8 0.1 1.0 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnI) Phage_int_SAM_3 PF14659.6 ORF63188 - 0.044 14.1 3.1 0.044 14.1 3.1 1.5 1 1 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain DUF4452 PF14618.6 ORF63043 - 0.032 14.1 0.1 0.032 14.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4452) Homeobox_KN PF05920.11 ORF62412 - 2.6e-17 62.4 0.2 3.8e-17 61.9 0.2 1.2 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF62412 - 1.5e-10 40.7 0.4 1.7e-10 40.6 0.4 1.2 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF62412 - 0.00021 21.1 0.0 0.00061 19.6 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_3 PF01381.22 ORF62412 - 0.067 13.3 0.0 0.095 12.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix HTH_36 PF13730.6 ORF62412 - 0.095 12.7 0.0 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 Helix-turn-helix domain AP3D1 PF06375.11 ORF61708 - 4.5 7.5 16.0 4.8 7.4 16.0 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DpnI_C PF17726.1 ORF61251 - 0.0013 18.8 1.0 0.0017 18.5 1.0 1.4 1 0 0 1 1 1 1 Dam-replacing HTH domain DUF5409 PF17421.2 ORF61193 - 0.012 16.3 0.6 0.014 16.0 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) LRV_FeS PF05484.11 ORF61188 - 0.057 13.4 1.5 0.057 13.4 1.5 1.9 2 0 0 2 2 2 0 LRV protein FeS4 cluster zf_CCCH_4 PF18345.1 ORF61188 - 0.18 11.9 7.0 0.4 10.8 0.5 3.0 3 0 0 3 3 3 0 Zinc finger domain Agarase_CBM PF17992.1 ORF6107 - 0.2 11.2 0.1 0.23 11.0 0.1 1.0 1 0 0 1 1 1 0 Agarase CBM like domain DUF1289 PF06945.13 ORF60931 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) RAG2 PF03089.14 ORF60748 - 0.21 10.5 0.0 0.23 10.4 0.0 1.1 1 0 0 1 1 1 0 Recombination activating protein 2 SelR PF01641.18 ORF60144 - 1.1e-16 61.0 0.1 1.2e-16 60.9 0.1 1.0 1 0 0 1 1 1 1 SelR domain HSCB_C PF07743.13 ORF59808 - 0.022 15.2 2.1 0.026 15.0 2.1 1.1 1 0 0 1 1 1 0 HSCB C-terminal oligomerisation domain DUF948 PF06103.11 ORF59808 - 0.14 12.4 0.9 0.14 12.4 0.9 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) LMBR1 PF04791.16 ORF59770 - 0.012 14.6 0.1 0.013 14.5 0.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2718 PF10918.8 ORF59470 - 0.7 10.4 4.7 0.77 10.3 4.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2718) Na_K-ATPase PF00287.18 ORF59372 - 1.3 8.1 4.0 1.1 8.4 3.4 1.3 1 1 0 1 1 1 0 Sodium / potassium ATPase beta chain SGL PF08450.12 ORF59352 - 0.069 12.7 0.1 0.069 12.7 0.1 1.0 1 0 0 1 1 1 0 SMP-30/Gluconolactonase/LRE-like region DUF1289 PF06945.13 ORF59127 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) zf_PR_Knuckle PF18445.1 ORF58856 - 0.058 13.2 0.1 0.08 12.8 0.1 1.2 1 0 0 1 1 1 0 PR zinc knuckle motif DNA_gyraseB_C PF00986.21 ORF58767 - 4.6e-22 78.0 0.1 5.3e-22 77.8 0.1 1.0 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus Aim19 PF10315.9 ORF58756 - 0.03 14.6 0.0 0.032 14.5 0.0 1.1 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 19 LRR_RI_capping PF18779.1 ORF58657 - 0.05 13.3 0.1 0.096 12.4 0.1 1.5 1 0 0 1 1 1 0 Capping Ribonuclease inhibitor Leucine Rich Repeat Fmp27_WPPW PF10359.9 ORF58530 - 0.0046 15.9 0.4 0.0048 15.8 0.4 1.0 1 0 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain BLOC1_2 PF10046.9 ORF58530 - 0.0077 16.5 0.2 0.0084 16.4 0.2 1.0 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 ApoC-I PF04691.12 ORF58530 - 0.0097 15.8 0.2 0.017 15.1 0.1 1.5 1 1 0 1 1 1 1 Apolipoprotein C-I (ApoC-1) EzrA PF06160.12 ORF58530 - 0.027 12.7 0.2 0.032 12.4 0.2 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Noelin-1 PF12308.8 ORF58530 - 0.035 14.1 0.1 0.037 14.0 0.1 1.1 1 0 0 1 1 1 0 Neurogenesis glycoprotein CLZ PF16526.5 ORF58530 - 0.045 14.1 0.2 0.44 10.9 0.1 1.9 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF948 PF06103.11 ORF58530 - 0.051 13.8 0.1 0.06 13.6 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF16 PF01519.16 ORF58530 - 0.058 13.9 0.1 0.069 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 DUF5344 PF17279.2 ORF58530 - 0.063 13.9 0.2 0.077 13.6 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5344) Holin_BhlA PF10960.8 ORF58530 - 0.099 12.6 0.7 0.25 11.3 0.7 1.8 1 1 0 1 1 1 0 BhlA holin family Penicil_amidase PF01804.18 ORF58434 - 3.3e-19 69.3 0.0 3.5e-19 69.3 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase DUF3094 PF11293.8 ORF58418 - 0.046 13.4 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) DnaJ_C PF01556.18 ORF58316 - 0.078 13.1 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 DnaJ C terminal domain MSP1_C PF07462.11 ORF58225 - 0.49 9.0 1.2 0.53 8.9 1.2 1.0 1 0 0 1 1 1 0 Merozoite surface protein 1 (MSP1) C-terminus Sigma_reg_N PF13800.6 ORF58200 - 0.003 17.8 1.9 0.0033 17.7 1.9 1.1 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF5385 PF17359.2 ORF58200 - 0.54 9.8 1.0 0.62 9.6 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) YpmT PF17431.2 ORF57499 - 0.027 14.5 1.5 0.035 14.1 1.5 1.1 1 0 0 1 1 1 0 Uncharacterized YmpT-like DUF4878 PF12870.7 ORF57448 - 0.071 13.4 0.0 0.076 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4878) CTC1_2 PF15491.6 ORF56815 - 0.25 10.6 1.5 2.5 7.3 0.3 2.0 1 1 1 2 2 2 0 CST, telomere maintenance, complex subunit CTC1 Mucin-like PF16058.5 ORF56633 - 0.0032 17.5 0.7 0.0041 17.2 0.7 1.2 1 0 0 1 1 1 1 Mucin-like GST_C_3 PF14497.6 ORF56065 - 8.7e-05 22.7 0.0 9.5e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain COX8 PF02285.15 ORF56044 - 0.026 14.4 0.1 0.067 13.1 0.0 1.7 1 1 1 2 2 2 0 Cytochrome oxidase c subunit VIII DUF3382 PF11862.8 ORF55712 - 0.11 12.7 2.4 0.16 12.3 2.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3382) YfdX PF10938.8 ORF55627 - 0.031 14.2 0.0 0.032 14.2 0.0 1.0 1 0 0 1 1 1 0 YfdX protein U3snoRNP10 PF12397.8 ORF55622 - 0.0078 16.5 0.5 0.008 16.5 0.5 1.0 1 0 0 1 1 1 1 U3 small nucleolar RNA-associated protein 10 MRAP PF15183.6 ORF55408 - 0.0026 17.7 0.1 0.0029 17.5 0.1 1.1 1 0 0 1 1 1 1 Melanocortin-2 receptor accessory protein family Pkinase PF00069.25 ORF53582 - 8.8e-20 71.2 0.0 9.4e-20 71.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF53582 - 1.8e-11 43.8 0.0 2e-11 43.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF53582 - 0.019 13.8 0.0 0.019 13.8 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase NAD_binding_10 PF13460.6 ORF5299 - 6.1e-06 26.2 0.0 6.5e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Shikimate_DH PF01488.20 ORF5299 - 0.036 14.1 0.0 0.036 14.1 0.0 1.1 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase RmlD_sub_bind PF04321.17 ORF5299 - 0.036 13.1 0.0 0.036 13.1 0.0 1.0 1 0 0 1 1 1 0 RmlD substrate binding domain Sacchrp_dh_NADP PF03435.18 ORF5299 - 0.044 14.1 0.0 0.044 14.1 0.0 1.1 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Epimerase PF01370.21 ORF5299 - 0.055 12.9 0.0 0.055 12.9 0.0 1.1 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Semialdhyde_dh PF01118.24 ORF5299 - 0.071 13.6 0.0 0.071 13.5 0.0 1.0 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain DUF3685 PF12452.8 ORF5299 - 0.08 12.6 0.0 0.087 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) KR PF08659.10 ORF5299 - 0.094 12.6 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 KR domain Polysacc_synt_2 PF02719.15 ORF5299 - 0.099 11.8 0.0 0.099 11.8 0.0 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein tRNA-synt_2b PF00587.25 ORF52934 - 0.019 14.9 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) DUF761 PF05553.11 ORF52729 - 0.18 11.4 0.8 0.42 10.2 0.8 1.6 1 1 0 1 1 1 0 Cotton fibre expressed protein Metallophos PF00149.28 ORF52641 - 0.00074 20.1 0.1 0.00076 20.0 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF52641 - 0.037 14.2 0.0 0.041 14.1 0.0 1.0 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Phage_TAC_9 PF10876.8 ORF52641 - 0.074 13.1 0.0 0.078 13.1 0.0 1.1 1 0 0 1 1 1 0 Phage tail assemb.y chaperone protein, TAC Gryzun-like PF12742.7 ORF52641 - 0.14 12.2 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Gryzun, putative Golgi trafficking STPPase_N PF16891.5 ORF52436 - 0.23 11.9 1.1 0.34 11.4 1.1 1.3 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain SecIII_SopE_N PF05364.14 ORF52066 - 0.093 12.8 0.2 0.095 12.8 0.2 1.1 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Elicitin PF00964.17 ORF51887 - 0.0058 16.7 0.3 0.0065 16.6 0.3 1.1 1 0 0 1 1 1 1 Elicitin DSPc PF00782.20 ORF51413 - 2.9e-10 40.1 0.3 3.4e-10 39.8 0.3 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain UCH PF00443.29 ORF50984 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF50984 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor HET-S PF17108.5 ORF50229 - 0.29 10.9 0.5 0.29 10.9 0.5 1.7 2 0 0 2 2 2 0 N-terminal small S protein of HET, non-prionic Not3 PF04065.15 ORF50059 - 0.013 14.9 1.2 0.014 14.8 1.2 1.0 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component PsbY PF06298.11 ORF49676 - 4.1e-08 33.0 6.4 4.1e-08 33.0 6.4 1.8 2 0 0 2 2 2 1 Photosystem II protein Y (PsbY) Orthopox_A47 PF06334.11 ORF49621 - 0.25 10.6 0.0 0.27 10.5 0.0 1.0 1 0 0 1 1 1 0 Orthopoxvirus A47 protein DUF641 PF04859.12 ORF4941 - 0.078 13.3 5.3 0.081 13.3 5.3 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) FAM76 PF16046.5 ORF4941 - 0.25 10.7 5.8 0.25 10.7 5.8 1.0 1 0 0 1 1 1 0 FAM76 protein S-antigen PF05756.11 ORF49305 - 0.1 13.0 5.2 0.11 12.9 5.2 1.1 1 0 0 1 1 1 0 S-antigen protein DUF2347 PF09804.9 ORF49305 - 0.22 11.1 1.4 0.22 11.1 1.4 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2347) Cys_rich_KTR PF14205.6 ORF49082 - 0.053 13.3 0.6 0.077 12.8 0.6 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR HTH_9 PF08221.11 ORF4864 - 0.045 13.8 0.2 0.089 12.9 0.1 1.5 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain UL11 PF11094.8 ORF48522 - 0.21 11.5 0.5 0.21 11.5 0.5 1.9 2 0 0 2 2 2 0 Membrane-associated tegument protein UCH PF00443.29 ORF48195 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF48195 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor zf-LITAF-like PF10601.9 ORF48005 - 0.04 14.2 0.0 0.047 13.9 0.0 1.1 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Shugoshin_N PF07558.11 ORF47988 - 0.02 14.8 0.1 0.039 13.8 0.1 1.5 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region CobW_C PF07683.14 ORF47875 - 2.3e-09 37.0 0.0 2.5e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain DUF1231 PF06802.11 ORF47766 - 0.058 12.5 0.0 0.058 12.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1231) Sugar_tr PF00083.24 ORF47588 - 2.2e-16 59.8 2.7 2.3e-16 59.7 2.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF47588 - 0.0001 21.4 4.7 0.00011 21.3 4.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Phage_holin_3_2 PF04550.12 ORF47588 - 0.12 12.9 4.0 0.21 12.1 3.9 1.5 1 1 0 1 1 1 0 Phage holin family 2 Met_10 PF02475.16 ORF47527 - 0.23 11.2 0.0 0.28 10.9 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein SPT_ssu-like PF11779.8 ORF47527 - 0.25 11.0 3.1 0.48 10.1 3.1 1.5 1 1 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like TMEM51 PF15345.6 ORF46342 - 0.13 12.0 0.6 0.13 12.1 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 PsbW PF07123.12 ORF46280 - 0.084 12.9 1.2 0.083 12.9 1.2 1.0 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) zf-RING_2 PF13639.6 ORF46222 - 1.7e-05 25.0 5.0 2e-05 24.8 5.0 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF46222 - 6.5e-05 22.7 6.2 7.9e-05 22.4 6.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF46222 - 0.00026 21.2 3.0 0.00028 21.1 3.0 1.1 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF46222 - 0.00077 19.3 10.0 0.0012 18.7 10.0 1.5 1 1 1 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF46222 - 0.00079 19.1 0.1 0.00079 19.1 0.1 1.7 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF46222 - 0.0022 17.9 5.1 0.0028 17.6 5.1 1.2 1 0 0 1 1 1 1 zinc-RING finger domain SHOCT PF09851.9 ORF46222 - 0.11 12.2 0.3 0.17 11.7 0.3 1.3 1 0 0 1 1 1 0 Short C-terminal domain FAM86 PF14904.6 ORF46009 - 0.052 13.6 0.1 0.059 13.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function Ustilago_mating PF05722.12 ORF45793 - 0.012 15.2 1.8 0.012 15.2 1.8 1.0 1 0 0 1 1 1 0 Ustilago B locus mating-type protein GAIN PF16489.5 ORF45128 - 0.018 14.5 0.1 0.019 14.4 0.1 1.0 1 0 0 1 1 1 0 GPCR-Autoproteolysis INducing (GAIN) domain Phage_int_SAM_5 PF13102.6 ORF45128 - 0.032 14.6 0.2 0.04 14.2 0.2 1.1 1 0 0 1 1 1 0 Phage integrase SAM-like domain DUF749 PF05370.11 ORF43943 - 0.016 15.2 1.8 0.018 15.1 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF749) DivIC PF04977.15 ORF43943 - 0.85 9.4 8.0 3.4 7.5 0.5 2.1 1 1 1 2 2 2 0 Septum formation initiator X PF00739.19 ORF43622 - 0.13 12.4 0.2 0.14 12.3 0.2 1.1 1 0 0 1 1 1 0 Trans-activation protein X CLN5 PF15014.6 ORF4341 - 0.059 13.0 0.0 0.06 13.0 0.0 1.0 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 5 Ferrochelatase PF00762.19 ORF43325 - 0.022 13.8 0.0 0.023 13.8 0.0 1.0 1 0 0 1 1 1 0 Ferrochelatase Sigma_reg_N PF13800.6 ORF43008 - 0.003 17.8 1.8 0.0032 17.7 1.8 1.1 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF5385 PF17359.2 ORF43008 - 0.47 10.0 1.1 0.54 9.8 1.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) SyrA PF11089.8 ORF42935 - 0.039 14.0 0.8 1.9 8.7 0.1 2.4 1 1 1 2 2 2 0 Exopolysaccharide production repressor CEP76-C2 PF15627.6 ORF42273 - 0.013 15.1 0.1 0.015 14.9 0.1 1.1 1 0 0 1 1 1 0 CEP76 C2 domain RasGAP_C PF03836.15 ORF42238 - 0.0025 18.0 5.0 0.0026 17.9 5.0 1.0 1 0 0 1 1 1 1 RasGAP C-terminus DUF4872 PF16169.5 ORF42238 - 0.003 17.4 0.1 0.003 17.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4872) FAM25 PF15825.5 ORF42238 - 0.24 11.8 4.4 0.46 10.9 2.9 2.0 1 1 1 2 2 2 0 FAM25 family zf-C4H2 PF10146.9 ORF42238 - 0.74 10.1 7.6 0.74 10.1 7.6 1.0 1 0 0 1 1 1 0 Zinc finger-containing protein URO-D PF01208.17 ORF42205 - 4.1e-12 45.9 0.0 4.3e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) zf-CCHC_3 PF13917.6 ORF42205 - 0.00044 20.1 0.3 0.00061 19.7 0.3 1.2 1 0 0 1 1 1 1 Zinc knuckle DUF5635 PF18685.1 ORF41720 - 0.059 13.3 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5635) nsp8 PF08717.10 ORF41245 - 0.16 11.8 0.1 0.18 11.7 0.1 1.0 1 0 0 1 1 1 0 nsp8 replicase DUF2062 PF09835.9 ORF41199 - 0.11 12.4 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) T4_Rnl2_C PF18043.1 ORF4117 - 0.029 14.5 0.1 0.036 14.2 0.1 1.2 1 0 0 1 1 1 0 T4 RNA ligase 2 C-terminal HCV_NS5a PF01506.19 ORF41093 - 0.44 10.5 5.4 0.22 11.4 2.3 1.9 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a protein membrane anchor LIN52 PF10044.9 ORF40836 - 0.065 13.9 2.2 0.07 13.8 2.2 1.0 1 0 0 1 1 1 0 Retinal tissue protein RTP801_C PF07809.11 ORF40456 - 0.15 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 RTP801 C-terminal region TRIC PF05197.13 ORF40123 - 0.15 11.6 0.0 0.15 11.6 0.0 1.0 1 0 0 1 1 1 0 TRIC channel GcnA_N PF18229.1 ORF40076 - 1.2 9.2 3.1 0.95 9.5 1.1 1.8 1 1 1 2 2 2 0 N-acetyl-beta-D-glucosaminidase N-terminal domain PsbW PF07123.12 ORF39885 - 0.084 12.9 1.2 0.083 12.9 1.2 1.0 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) DUF4190 PF13828.6 ORF39743 - 0.0054 16.5 0.0 0.0065 16.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4190) Beta-lactamase2 PF13354.6 ORF39660 - 0.11 12.1 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Beta-lactamase enzyme family DUF3019 PF11456.8 ORF39615 - 0.021 15.3 0.4 0.024 15.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3019) UCH PF00443.29 ORF39292 - 3.6e-09 36.5 0.2 3.7e-09 36.4 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Integrin_B_tail PF07965.12 ORF39103 - 0.0098 16.4 0.1 0.011 16.2 0.1 1.0 1 0 0 1 1 1 1 Integrin beta tail domain Knl1_RWD_C PF18210.1 ORF38970 - 0.11 13.0 0.1 0.13 12.7 0.1 1.1 1 0 0 1 1 1 0 Knl1 RWD C-terminal domain RasGEF_N PF00618.20 ORF38658 - 0.18 12.1 3.0 0.21 11.8 3.0 1.1 1 0 0 1 1 1 0 RasGEF N-terminal motif Antimicrobial25 PF16839.5 ORF38455 - 0.3 11.2 9.6 0.093 12.8 6.8 1.6 2 0 0 2 2 2 0 Nematode antimicrobial peptide Elicitin PF00964.17 ORF3842 - 0.0058 16.7 0.3 0.0065 16.6 0.3 1.1 1 0 0 1 1 1 1 Elicitin MORN PF02493.20 ORF38024 - 2.3e-11 42.9 11.1 0.006 16.4 5.3 3.1 3 0 0 3 3 3 3 MORN repeat zf-MYST PF17772.1 ORF37981 - 0.011 15.4 0.1 4.1 7.1 0.0 2.1 2 0 0 2 2 2 0 MYST family zinc finger domain CHCH PF06747.13 ORF37963 - 0.15 12.3 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 CHCH domain DUF3390 PF11870.8 ORF37450 - 0.091 13.1 1.3 0.13 12.7 0.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3390) ALS_ss_C PF10369.9 ORF37074 - 0.094 12.9 0.1 0.094 12.9 0.1 1.2 1 0 0 1 1 1 0 Small subunit of acetolactate synthase VIT_2 PF13757.6 ORF3704 - 0.041 13.8 0.6 0.1 12.5 0.4 1.7 1 1 1 2 2 2 0 Vault protein inter-alpha-trypsin domain Pkinase PF00069.25 ORF37013 - 4.2e-17 62.4 1.2 4.4e-17 62.3 1.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF37013 - 3.3e-07 29.9 0.1 3.3e-07 29.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF37013 - 1.8e-05 24.2 0.1 1.8e-05 24.2 0.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EcKinase PF02958.20 ORF37013 - 4.4e-05 23.0 0.0 4.6e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Ecdysteroid kinase APH PF01636.23 ORF37013 - 0.00025 21.1 0.0 0.00028 20.9 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF37013 - 0.0015 17.4 0.2 0.0016 17.3 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase YrbL-PhoP_reg PF10707.9 ORF37013 - 0.011 15.2 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Choline_kinase PF01633.20 ORF37013 - 0.016 14.8 0.1 0.016 14.8 0.1 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase DUF1679 PF07914.11 ORF37013 - 0.042 12.7 0.0 0.042 12.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) FTA2 PF13095.6 ORF37013 - 0.082 12.5 0.0 0.087 12.4 0.0 1.3 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Importin_rep_3 PF18806.1 ORF36892 - 0.044 13.8 2.4 0.051 13.6 2.4 1.1 1 0 0 1 1 1 0 Importin 13 repeat TMEM208_SND2 PF05620.11 ORF36556 - 0.12 12.2 0.2 0.13 12.0 0.2 1.0 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 DUF4295 PF14128.6 ORF36245 - 0.049 13.4 1.1 0.067 13.0 1.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4295) Filament_head PF04732.14 ORF36020 - 0.0013 19.5 3.4 0.0015 19.4 3.4 1.0 1 0 0 1 1 1 1 Intermediate filament head (DNA binding) region Elicitin PF00964.17 ORF3581 - 0.0058 16.7 0.3 0.0065 16.6 0.3 1.1 1 0 0 1 1 1 1 Elicitin DNA_ligase_ZBD PF03119.16 ORF35312 - 0.013 15.5 0.5 0.023 14.7 0.5 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain DUF1289 PF06945.13 ORF34743 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) DUF2510 PF10708.9 ORF34611 - 0.13 12.0 6.6 1.1 9.1 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2510) R3H PF01424.22 ORF34420 - 0.14 12.2 0.0 0.24 11.4 0.0 1.4 1 1 0 1 1 1 0 R3H domain DUF1289 PF06945.13 ORF34243 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) ATP-grasp_6 PF18419.1 ORF34132 - 0.069 12.8 0.0 0.18 11.4 0.0 1.7 2 0 0 2 2 2 0 ATP-grasp-like domain Ras PF00071.22 ORF33787 - 0.0002 21.0 0.1 0.00024 20.8 0.1 1.1 1 0 0 1 1 1 1 Ras family ATAD4 PF15321.6 ORF32650 - 0.096 14.0 4.1 0.12 13.8 4.1 1.1 1 0 0 1 1 1 0 ATPase family AAA domain containing 4 Elicitin PF00964.17 ORF32275 - 0.0058 16.7 0.3 0.0065 16.6 0.3 1.1 1 0 0 1 1 1 1 Elicitin Orthopox_A47 PF06334.11 ORF32266 - 0.25 10.6 0.0 0.27 10.5 0.0 1.0 1 0 0 1 1 1 0 Orthopoxvirus A47 protein LapA_dom PF06305.11 ORF32134 - 0.0021 17.9 0.0 0.0031 17.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide assembly protein A domain Spore_YhaL PF14147.6 ORF32134 - 0.0059 16.3 0.1 0.0091 15.7 0.1 1.4 1 0 0 1 1 1 1 Sporulation protein YhaL DUF2681 PF10883.8 ORF32134 - 0.023 15.1 0.0 0.028 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) DUF4083 PF13314.6 ORF32134 - 0.043 13.8 0.1 0.054 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) DUF1129 PF06570.11 ORF32134 - 0.067 12.7 0.1 0.067 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF5305 PF17231.2 ORF32134 - 0.075 12.4 0.1 0.079 12.4 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF1295 PF06966.12 ORF32134 - 0.078 12.5 0.0 0.08 12.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1295) TMEM171 PF15471.6 ORF32134 - 0.36 9.8 1.9 6.9 5.5 0.3 2.0 1 1 1 2 2 2 0 Transmembrane protein family 171 DUF1440 PF07274.12 ORF32034 - 2e-13 50.8 1.0 2.4e-13 50.6 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1440) DUF2963 PF11178.8 ORF31563 - 0.0059 16.3 1.5 0.0059 16.3 1.5 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2963) AWS PF17907.1 ORF31260 - 0.0042 17.1 1.9 0.07 13.2 1.9 2.2 1 1 0 1 1 1 1 AWS domain Synaptobrevin PF00957.21 ORF31174 - 0.02 14.7 0.8 0.024 14.4 0.8 1.1 1 0 0 1 1 1 0 Synaptobrevin RE_MamI PF09567.10 ORF30907 - 0.065 12.9 0.1 0.065 12.9 0.1 1.0 1 0 0 1 1 1 0 MamI restriction endonuclease DUF512 PF04459.12 ORF30641 - 0.049 12.9 0.1 0.055 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF512) eIF-5_eIF-2B PF01873.17 ORF30641 - 0.082 12.8 0.2 0.084 12.8 0.2 1.1 1 0 0 1 1 1 0 Domain found in IF2B/IF5 DUF3094 PF11293.8 ORF30584 - 0.046 13.4 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) Tubulin PF00091.25 ORF3058 - 9.9e-07 29.1 0.2 1.1e-06 29.1 0.2 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain VWA_2 PF13519.6 ORF30464 - 0.074 13.7 0.1 0.084 13.5 0.1 1.1 1 0 0 1 1 1 0 von Willebrand factor type A domain DUF1869 PF08956.10 ORF30204 - 5.4e-32 109.5 1.7 5.9e-32 109.4 1.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1869) DUF11 PF01345.18 ORF30204 - 0.44 10.9 5.2 0.64 10.3 4.7 1.5 1 1 1 2 2 2 0 Domain of unknown function DUF11 DUF2688 PF10892.8 ORF30191 - 0.064 12.7 0.1 5.1 6.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) Elicitin PF00964.17 ORF30185 - 0.0058 16.7 0.3 0.0065 16.6 0.3 1.1 1 0 0 1 1 1 1 Elicitin LSM_int_assoc PF16605.5 ORF30176 - 0.18 11.9 0.1 0.3 11.2 0.1 1.5 1 1 0 1 1 1 0 LSM-interacting associated unstructured Elicitin PF00964.17 ORF29973 - 0.0058 16.7 0.3 0.0065 16.6 0.3 1.1 1 0 0 1 1 1 1 Elicitin Met_10 PF02475.16 ORF29683 - 0.23 11.2 0.0 0.28 10.9 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein SPT_ssu-like PF11779.8 ORF29683 - 0.25 11.0 3.1 0.48 10.1 3.1 1.5 1 1 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like Ripply PF14998.6 ORF29672 - 0.097 13.3 0.2 0.1 13.2 0.2 1.1 1 0 0 1 1 1 0 Transcription Regulator DUF5607 PF18355.1 ORF29589 - 0.068 13.6 0.1 0.096 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5607) Cathelicidins PF00666.17 ORF29293 - 0.026 14.8 0.3 0.029 14.7 0.3 1.1 1 0 0 1 1 1 0 Cathelicidin Selenoprotein_S PF06936.11 ORF28552 - 0.23 11.3 4.1 0.27 11.0 4.1 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) DnaJ PF00226.31 ORF28389 - 1.1e-09 38.2 1.9 3.7e-09 36.6 1.5 1.8 2 0 0 2 2 2 1 DnaJ domain zf-C2H2_4 PF13894.6 ORF27774 - 0.0031 18.2 1.0 0.0047 17.7 1.0 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-3CxxC PF13695.6 ORF27774 - 0.012 16.0 0.2 0.015 15.8 0.2 1.1 1 0 0 1 1 1 0 Zinc-binding domain Rad50_zn_hook PF04423.14 ORF27774 - 0.018 14.8 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif zf_UBZ PF18439.1 ORF27774 - 0.032 13.8 0.3 0.05 13.2 0.3 1.3 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf-RING_4 PF14570.6 ORF27774 - 0.044 13.6 0.0 0.067 13.0 0.0 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-H2C2_2 PF13465.6 ORF27774 - 0.061 13.8 0.4 0.097 13.1 0.1 1.5 2 0 0 2 2 2 0 Zinc-finger double domain zf-3CxxC PF13695.6 ORF27701 - 0.042 14.3 0.1 0.046 14.2 0.1 1.0 1 0 0 1 1 1 0 Zinc-binding domain UCH PF00443.29 ORF27335 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF27335 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor DUF3155 PF11352.8 ORF27284 - 0.087 13.3 0.0 0.087 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3155) VIT_2 PF13757.6 ORF27244 - 0.041 13.8 0.6 0.1 12.5 0.4 1.7 1 1 1 2 2 2 0 Vault protein inter-alpha-trypsin domain DUF3649 PF12365.8 ORF26835 - 0.0058 16.3 0.8 0.0084 15.8 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3649) DUF3489 PF11994.8 ORF26230 - 0.16 12.0 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) Striatin PF08232.12 ORF2580 - 0.0067 17.0 0.5 0.12 12.9 0.2 1.9 1 1 1 2 2 2 2 Striatin family Prefoldin PF02996.17 ORF25773 - 0.097 12.6 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit SH3_7 PF12914.7 ORF25217 - 0.043 14.0 0.2 0.067 13.4 0.2 1.3 1 0 0 1 1 1 0 SH3 domain of SH3b2 type DUF3339 PF11820.8 ORF25035 - 0.022 14.9 1.1 0.029 14.5 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3339) U83 PF17465.2 ORF25035 - 0.11 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Chemokine-like protein, HHV-6 U83 gene product DUF4597 PF15366.6 ORF24953 - 2.8 7.7 6.2 2.1 8.2 4.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4597) CAP160 PF07918.11 ORF23721 - 0.27 11.0 2.9 0.38 10.5 2.9 1.2 1 0 0 1 1 1 0 CAP160 repeat PepSY_TM PF03929.16 ORF22911 - 0.068 12.8 0.0 0.074 12.7 0.0 1.1 1 0 0 1 1 1 0 PepSY-associated TM region Afaf PF15339.6 ORF22911 - 0.95 9.1 4.8 1 9.1 4.8 1.1 1 0 0 1 1 1 0 Acrosome formation-associated factor DUF3043 PF11241.8 ORF22911 - 0.98 9.4 6.3 1 9.4 6.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF2946 PF11162.8 ORF22911 - 1.9 9.2 4.5 2.2 8.9 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) Pox_A14 PF05767.12 ORF22770 - 0.046 13.9 0.5 0.052 13.7 0.5 1.1 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 Sigma_reg_N PF13800.6 ORF22704 - 0.003 17.8 1.9 0.0033 17.7 1.9 1.1 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF5385 PF17359.2 ORF22704 - 0.54 9.8 1.0 0.62 9.6 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) zf-CHCC PF10276.9 ORF22628 - 0.0034 17.4 0.0 0.0043 17.1 0.0 1.2 1 0 0 1 1 1 1 Zinc-finger domain SelR PF01641.18 ORF224 - 1.1e-16 61.0 0.1 1.2e-16 60.9 0.1 1.0 1 0 0 1 1 1 1 SelR domain Flot PF15975.5 ORF22375 - 0.03 14.5 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Flotillin DUF5326 PF17260.2 ORF22348 - 0.0039 17.3 0.8 0.0045 17.1 0.8 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5326) CDC48_2 PF02933.17 ORF22303 - 0.11 12.3 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 AbiJ_NTD5 PF18865.1 ORF22227 - 0.043 13.6 0.2 0.066 13.0 0.2 1.3 1 0 0 1 1 1 0 AbiJ N-terminal domain 5 Vel1p PF10339.9 ORF21693 - 0.058 12.8 0.2 0.063 12.7 0.2 1.0 1 0 0 1 1 1 0 Yeast-specific zinc responsive LssY_C PF14067.6 ORF2129 - 0.098 12.2 0.1 0.11 12.0 0.1 1.1 1 0 0 1 1 1 0 LssY C-terminus PXB PF12828.7 ORF2059 - 0.055 13.5 0.1 0.062 13.3 0.1 1.1 1 0 0 1 1 1 0 PX-associated Voltage_CLC PF00654.20 ORF20342 - 1e-10 41.5 4.8 1.1e-10 41.3 4.8 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel CobW_C PF07683.14 ORF20132 - 5.6e-09 35.8 0.0 6e-09 35.7 0.0 1.0 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain Sugar_tr PF00083.24 ORF20050 - 0.0067 15.3 0.1 0.007 15.3 0.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Mito_carr PF00153.27 ORF19865 - 0.018 14.9 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial carrier protein DnaGprimase_HBD PF16730.5 ORF19354 - 0.17 12.0 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 DnaG-primase C-terminal, helicase-binding domain Sugar_tr PF00083.24 ORF19022 - 0.00026 20.0 0.5 0.00028 19.9 0.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter BACK PF07707.15 ORF18859 - 0.00017 21.6 0.1 0.00017 21.6 0.1 1.1 1 0 0 1 1 1 1 BTB And C-terminal Kelch Suv3_N PF18114.1 ORF18859 - 0.044 13.9 0.2 0.047 13.8 0.2 1.1 1 0 0 1 1 1 0 Suv3 helical N-terminal domain Op_neuropeptide PF08035.11 ORF18859 - 1.6 8.7 3.5 6.4 6.7 0.3 2.7 2 1 0 2 2 2 0 Opioids neuropeptide zf-RING_2 PF13639.6 ORF18849 - 8.1e-11 42.1 2.3 1.1e-10 41.7 2.3 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF18849 - 7.4e-10 38.5 2.5 9e-10 38.2 2.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF18849 - 3.1e-09 37.0 3.9 4.3e-09 36.5 3.9 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain Prok-RING_4 PF14447.6 ORF18849 - 8.7e-08 31.9 2.1 1.2e-07 31.4 2.1 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF18849 - 9.5e-07 28.7 1.1 1.5e-06 28.1 1.1 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF18849 - 2.3e-06 27.4 1.2 3.1e-06 27.0 1.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF18849 - 3.5e-06 26.7 0.2 3.5e-06 26.7 0.2 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF18849 - 4.7e-06 26.5 1.0 4.7e-06 26.5 1.0 1.8 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF18849 - 2.7e-05 24.0 0.9 3.9e-05 23.4 0.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF18849 - 7.4e-05 22.7 0.4 0.00012 22.1 0.4 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF18849 - 8.4e-05 22.1 1.4 0.00012 21.6 1.4 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF18849 - 0.0012 18.9 1.6 0.0067 16.6 1.9 1.8 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF18849 - 0.0069 16.2 0.5 0.0096 15.7 0.5 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Rad50_zn_hook PF04423.14 ORF18849 - 0.0094 15.8 0.6 0.012 15.4 0.6 1.3 1 0 0 1 1 1 1 Rad50 zinc hook motif zf-RING-like PF08746.11 ORF18849 - 0.031 14.6 1.7 0.053 13.8 1.7 1.4 1 0 0 1 1 1 0 RING-like domain FANCL_C PF11793.8 ORF18849 - 0.037 14.2 1.7 0.47 10.7 1.7 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain UPF0547 PF10571.9 ORF18849 - 0.054 13.6 4.3 0.52 10.4 0.5 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_16 PF17034.5 ORF18849 - 0.08 13.2 2.6 0.087 13.0 2.2 1.3 1 1 0 1 1 1 0 Zinc-ribbon like family PHD PF00628.29 ORF18849 - 0.082 12.8 3.9 0.17 11.8 3.8 1.6 1 1 0 1 1 1 0 PHD-finger zf-C3H2C3 PF17122.5 ORF18849 - 0.15 12.1 5.1 0.33 11.0 5.1 1.5 1 1 0 1 1 1 0 Zinc-finger PH PF00169.29 ORF1882 - 3.5e-08 33.9 0.7 3.8e-08 33.8 0.7 1.0 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF1882 - 1.7e-05 25.2 0.4 1.9e-05 25.1 0.4 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain PH_8 PF15409.6 ORF1882 - 0.0025 18.0 0.1 0.0028 17.9 0.1 1.1 1 0 0 1 1 1 1 Pleckstrin homology domain PspA_IM30 PF04012.12 ORF18696 - 0.02 14.5 1.1 0.021 14.4 1.1 1.0 1 0 0 1 1 1 0 PspA/IM30 family UCH PF00443.29 ORF18668 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF18668 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor Pyr_redox_dim PF02852.22 ORF18654 - 0.021 15.1 0.0 0.028 14.7 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UCH PF00443.29 ORF18613 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF18613 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor DUF4061 PF13270.6 ORF18217 - 0.08 13.3 0.2 0.081 13.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4061) Na_H_antiport_1 PF06965.12 ORF1814 - 1e-15 57.5 2.0 1.1e-15 57.4 2.0 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 PARP PF00644.20 ORF17906 - 0.074 12.6 0.2 0.074 12.6 0.2 1.1 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain Exonuc_VII_S PF02609.16 ORF17892 - 0.031 14.4 0.1 0.039 14.0 0.1 1.3 1 0 0 1 1 1 0 Exonuclease VII small subunit DUF2750 PF11042.8 ORF17892 - 0.12 12.5 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2750) Dala_Dala_lig_C PF07478.13 ORF17660 - 0.099 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus CAP_N PF01213.19 ORF17080 - 0.16 11.5 0.1 0.16 11.5 0.1 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks424.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks424.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks424.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks424.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:19:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Elicitin PF00964.17 ORF17034 - 0.0058 16.7 0.3 0.0065 16.6 0.3 1.1 1 0 0 1 1 1 1 Elicitin Pox_F17 PF04767.12 ORF17018 - 0.49 10.9 2.6 0.7 10.4 2.6 1.5 1 1 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein RepB-RCR_reg PF10723.9 ORF16734 - 0.0081 16.1 0.1 0.0081 16.1 0.1 1.2 1 0 0 1 1 1 1 Replication regulatory protein RepB DrrA_P4M PF14860.6 ORF16734 - 0.071 13.0 0.1 0.081 12.8 0.1 1.0 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain DUF5403 PF17395.2 ORF16459 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) UCH PF00443.29 ORF14821 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF14821 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor HTH_38 PF13936.6 ORF14367 - 0.075 12.8 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DUF5403 PF17395.2 ORF14141 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) zf-TRAF_2 PF15965.5 ORF13894 - 0.0001 22.7 1.8 0.00012 22.5 1.8 1.2 1 0 0 1 1 1 1 TRAF-like zinc-finger Sina PF03145.16 ORF13894 - 0.0011 19.0 2.9 0.0013 18.8 2.9 1.1 1 0 0 1 1 1 1 Seven in absentia protein family zf-C2H2_12 PF18658.1 ORF13894 - 0.014 15.0 0.9 0.016 14.8 0.9 1.1 1 0 0 1 1 1 0 Zinc-finger C2H2-type HECT PF00632.25 ORF13767 - 6.6e-07 29.1 0.0 6.6e-07 29.1 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Herpes_UL52 PF03121.15 ORF13767 - 0.018 14.9 0.0 0.022 14.7 0.0 1.2 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase zf-UBP_var PF17807.1 ORF13717 - 0.023 14.5 1.4 0.03 14.1 1.4 1.3 1 0 0 1 1 1 0 Variant UBP zinc finger His_Me_b4a2 PF18275.1 ORF13717 - 0.085 12.9 2.0 0.11 12.6 2.0 1.1 1 0 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain TT_ORF2 PF02957.15 ORF13717 - 0.12 13.3 0.3 0.14 13.1 0.3 1.1 1 0 0 1 1 1 0 TT viral ORF2 PI3_PI4_kinase PF00454.27 ORF13570 - 6.7e-06 26.1 0.3 7.6e-06 25.9 0.3 1.1 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase TTc_toxin_rep PF18807.1 ORF13086 - 0.081 12.7 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Tripartite Tc toxins repeat Metallophos PF00149.28 ORF13057 - 0.00074 20.1 0.1 0.00076 20.0 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF13057 - 0.037 14.2 0.0 0.041 14.1 0.0 1.0 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Phage_TAC_9 PF10876.8 ORF13057 - 0.074 13.1 0.0 0.078 13.1 0.0 1.1 1 0 0 1 1 1 0 Phage tail assemb.y chaperone protein, TAC Gryzun-like PF12742.7 ORF13057 - 0.14 12.2 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Gryzun, putative Golgi trafficking E_Pc_C PF06752.12 ORF12718 - 0.23 11.5 0.9 0.25 11.4 0.9 1.1 1 0 0 1 1 1 0 Enhancer of Polycomb C-terminus AP3D1 PF06375.11 ORF12306 - 4.5 7.5 16.0 4.8 7.4 16.0 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 zf-RanBP PF00641.18 ORF12267 - 1.8 7.9 7.5 0.12 11.7 1.6 2.0 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others CaMBD PF02888.16 ORF11869 - 0.062 13.5 2.2 0.073 13.3 2.2 1.2 1 0 0 1 1 1 0 Calmodulin binding domain LELP1 PF15042.6 ORF11737 - 0.015 15.7 2.1 0.015 15.7 2.1 1.1 1 0 0 1 1 1 0 Late cornified envelope-like proline-rich protein 1 DUF3019 PF11456.8 ORF11679 - 0.021 15.3 0.4 0.024 15.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3019) MBDa PF16564.5 ORF11638 - 0.0026 17.9 0.1 0.003 17.7 0.1 1.1 1 0 0 1 1 1 1 p55-binding region of Methyl-CpG-binding domain proteins MBD FA_hydroxylase PF04116.13 ORF11528 - 7.3e-08 32.8 2.9 9e-08 32.5 2.9 1.2 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily DUF3377 PF11857.8 ORF11459 - 0.076 12.9 0.3 0.093 12.7 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) HEM4 PF02602.15 ORF112476 - 0.09 12.1 0.0 0.09 12.1 0.0 1.0 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD Ribosomal_L33 PF00471.20 ORF111796 - 0.00055 20.3 0.0 0.0011 19.4 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L33 T6SS_Vgr PF13296.6 ORF111759 - 0.0088 16.2 0.1 0.0097 16.0 0.1 1.1 1 0 0 1 1 1 1 Putative type VI secretion system Rhs element Vgr 7tm_2 PF00002.24 ORF111752 - 0.0023 17.3 1.2 0.0023 17.3 1.2 1.0 1 0 0 1 1 1 1 7 transmembrane receptor (Secretin family) TMEM132D_C PF15706.5 ORF111251 - 0.0024 17.6 0.5 0.0028 17.4 0.5 1.1 1 0 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Peptidase_C2 PF00648.21 ORF111038 - 0.096 11.7 0.7 0.094 11.7 0.7 1.0 1 0 0 1 1 1 0 Calpain family cysteine protease DUF4116 PF13475.6 ORF110800 - 1.3e-08 34.4 0.0 2.3e-08 33.6 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4116) ScsC_N PF18312.1 ORF110800 - 0.04 13.7 0.0 0.59 10.0 0.0 2.1 2 0 0 2 2 2 0 Copper resistance protein ScsC N-terminal domain Trm112p PF03966.16 ORF110688 - 7.4e-09 36.1 0.4 1.7e-08 34.9 0.4 1.6 1 1 0 1 1 1 1 Trm112p-like protein zf-RRN7 PF11781.8 ORF110688 - 0.011 15.4 0.1 0.019 14.7 0.1 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 A2L_zn_ribbon PF08792.10 ORF110688 - 0.017 14.8 0.1 0.019 14.7 0.1 1.2 1 0 0 1 1 1 0 A2L zinc ribbon domain DUF2318 PF10080.9 ORF110688 - 0.024 14.7 0.0 0.03 14.4 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) TF_Zn_Ribbon PF08271.12 ORF110688 - 0.053 13.0 0.0 0.072 12.6 0.0 1.2 1 0 0 1 1 1 0 TFIIB zinc-binding Rad50_zn_hook PF04423.14 ORF110688 - 0.073 12.9 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif KNOX2 PF03791.13 ORF109821 - 0.0089 15.5 0.0 0.019 14.5 0.0 1.6 2 0 0 2 2 2 1 KNOX2 domain Oxidored_q2 PF00420.24 ORF109733 - 0.021 14.4 1.2 0.022 14.4 1.2 1.0 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2304 PF10066.9 ORF109733 - 0.12 12.6 1.5 0.13 12.5 1.5 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) SWIM PF04434.17 ORF109625 - 0.1 12.3 4.1 0.83 9.4 0.1 2.2 2 0 0 2 2 2 0 SWIM zinc finger KELK PF15796.5 ORF108919 - 0.026 15.0 0.5 0.027 14.9 0.5 1.1 1 0 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Syndecan PF01034.20 ORF108752 - 1.3 9.0 5.4 1.9 8.5 5.4 1.3 1 0 0 1 1 1 0 Syndecan domain SPC12 PF06645.13 ORF108752 - 2 8.6 8.3 2.6 8.2 8.3 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) S_4TM PF18159.1 ORF108752 - 3.9 6.7 6.6 4.5 6.5 6.6 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF3487 PF11990.8 ORF108752 - 4.3 7.3 9.3 4.8 7.1 9.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) Fumble PF03630.14 ORF108480 - 7e-15 55.0 0.2 7e-15 55.0 0.2 1.0 1 0 0 1 1 1 1 Fumble zf_CopZ PF18423.1 ORF108480 - 0.065 13.2 0.0 0.07 13.1 0.0 1.1 1 0 0 1 1 1 0 Zinc binding domain EF-hand_6 PF13405.6 ORF108354 - 0.0036 17.1 2.2 0.012 15.5 0.8 2.0 1 1 1 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF108354 - 0.004 16.6 0.9 0.0086 15.6 0.3 1.8 1 1 1 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF108354 - 0.0068 16.8 0.5 0.0099 16.3 0.3 1.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF108354 - 0.012 15.1 0.8 0.021 14.3 0.8 1.4 1 0 0 1 1 1 0 EF hand EF-hand_4 PF12763.7 ORF108354 - 0.026 14.5 0.2 0.027 14.4 0.2 1.0 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF1289 PF06945.13 ORF108069 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) U-box PF04564.15 ORF107529 - 5.9e-16 58.4 0.1 6.9e-16 58.2 0.1 1.0 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF107529 - 0.026 14.6 0.0 0.038 14.1 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger of nitric oxide synthase-interacting protein Synaptobrevin PF00957.21 ORF107308 - 0.02 14.7 0.8 0.024 14.4 0.8 1.1 1 0 0 1 1 1 0 Synaptobrevin Peptidase_C6 PF00851.18 ORF107176 - 0.29 10.0 1.6 0.33 9.8 1.6 1.0 1 0 0 1 1 1 0 Helper component proteinase Deltaretro_Tax PF05599.11 ORF106697 - 1.9 9.1 7.9 74 4.0 7.9 2.0 1 1 0 1 1 1 0 Deltaretrovirus Tax protein DUF5463 PF17551.2 ORF106549 - 0.05 13.5 0.1 0.064 13.2 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5463) DUF1289 PF06945.13 ORF106279 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) Rz1 PF06085.11 ORF106002 - 1.9e-20 72.3 9.6 2.5e-20 71.9 9.6 1.2 1 0 0 1 1 1 1 Lipoprotein Rz1 precursor DUF1700 PF08006.11 ORF105841 - 6.1 6.3 13.1 6.8 6.2 13.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF5544 PF17698.1 ORF105188 - 0.034 14.2 0.6 0.039 14.1 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5544) Deltaretro_Tax PF05599.11 ORF104962 - 1.9 9.1 7.9 74 4.0 7.9 2.0 1 1 0 1 1 1 0 Deltaretrovirus Tax protein Pkinase PF00069.25 ORF104472 - 2.4e-09 37.0 0.0 2.4e-09 37.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF104472 - 0.06 12.6 0.0 0.072 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase CHB_HEX_C_1 PF13290.6 ORF104337 - 1.9e-09 37.4 0.3 2.1e-09 37.3 0.3 1.1 1 0 0 1 1 1 1 Chitobiase/beta-hexosaminidase C-terminal domain Fn3_assoc PF13287.6 ORF104337 - 2.5e-08 33.9 0.2 2.8e-08 33.8 0.2 1.1 1 0 0 1 1 1 1 Fn3 associated CaMBD PF02888.16 ORF10431 - 0.062 13.5 2.2 0.073 13.3 2.2 1.2 1 0 0 1 1 1 0 Calmodulin binding domain Terminase_3 PF04466.13 ORF104113 - 0.067 12.7 0.1 0.068 12.7 0.1 1.0 1 0 0 1 1 1 0 Phage terminase large subunit PsbY PF06298.11 ORF1041 - 4.1e-08 33.0 6.4 4.1e-08 33.0 6.4 1.8 2 0 0 2 2 2 1 Photosystem II protein Y (PsbY) DUF5323 PF17257.2 ORF104083 - 0.088 12.7 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5323) Ank_5 PF13857.6 ORF103917 - 4.8e-13 49.1 0.1 8.6e-07 29.1 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF103917 - 1.1e-09 38.6 0.1 3.1e-08 34.0 0.0 1.8 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF103917 - 6.4e-09 35.9 0.0 0.0013 19.1 0.0 2.0 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF103917 - 9.4e-09 35.7 0.1 2.4e-08 34.5 0.1 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF103917 - 1.1e-08 34.6 0.0 3.2e-05 24.0 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat GATase_7 PF13537.6 ORF103917 - 0.14 12.0 0.0 0.15 12.0 0.0 1.0 1 0 0 1 1 1 0 Glutamine amidotransferase domain Glyco_transf_8C PF08437.10 ORF10390 - 0.12 12.5 0.2 0.12 12.5 0.2 1.7 1 1 1 2 2 2 0 Glycosyl transferase family 8 C-terminal rve_3 PF13683.6 ORF103849 - 0.024 14.4 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 Integrase core domain NKAIN PF05640.14 ORF103840 - 0.0081 15.4 0.4 0.0088 15.3 0.4 1.1 1 0 0 1 1 1 1 Na,K-Atpase Interacting protein JAB PF01398.21 ORF103406 - 0.21 11.6 0.0 0.25 11.3 0.0 1.1 1 0 0 1 1 1 0 JAB1/Mov34/MPN/PAD-1 ubiquitin protease DUF2733 PF10813.8 ORF103269 - 0.18 11.6 0.6 0.31 10.9 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) ACTH_assoc PF16102.5 ORF103028 - 0.13 13.1 0.1 17 6.5 0.0 2.1 2 0 0 2 2 2 0 ACTH-associated domain DUF2208 PF09973.9 ORF102934 - 0.009 15.7 0.3 0.009 15.7 0.3 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) Ion_trans PF00520.31 ORF102774 - 0.18 11.0 1.2 0.18 11.0 1.2 1.1 1 0 0 1 1 1 0 Ion transport protein GPR15L PF15854.5 ORF102751 - 0.039 14.2 0.5 0.044 14.0 0.5 1.1 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 Acyl-ACP_TE PF01643.17 ORF102482 - 0.18 11.0 0.3 0.29 10.4 0.1 1.4 1 1 1 2 2 2 0 Acyl-ACP thioesterase Retinal PF15449.6 ORF102282 - 0.12 10.1 6.5 0.12 10.1 6.5 1.0 1 0 0 1 1 1 0 Retinal protein RNA_polI_A14 PF08203.11 ORF102245 - 0.055 14.2 1.1 0.065 14.0 1.1 1.2 1 0 0 1 1 1 0 Yeast RNA polymerase I subunit RPA14 CALM_bind PF16025.5 ORF102245 - 0.086 13.3 2.5 0.13 12.8 2.5 1.2 1 0 0 1 1 1 0 Calcium-dependent calmodulin binding DUF1764 PF08576.10 ORF102223 - 1 10.3 8.0 1.1 10.2 8.0 1.0 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF1764) SMC_N PF02463.19 ORF101950 - 0.03 13.8 0.3 0.036 13.5 0.3 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain RhoGEF67_u1 PF16615.5 ORF101731 - 0.066 13.7 7.4 0.066 13.7 6.8 1.3 1 1 0 1 1 1 0 Unstructured region one on RhoGEF 6 and 7 PDE6_gamma PF04868.12 ORF101731 - 0.15 12.3 0.2 0.18 12.1 0.2 1.2 1 0 0 1 1 1 0 Retinal cGMP phosphodiesterase, gamma subunit Ish1 PF10281.9 ORF101579 - 0.064 13.6 1.7 0.13 12.6 0.2 2.1 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein Phage_CRI PF05144.14 ORF101579 - 0.12 11.6 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Phage replication protein CRI RabGAP-TBC PF00566.18 ORF101474 - 0.02 14.6 1.0 0.02 14.6 1.0 1.0 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Type2_restr_D3 PF16902.5 ORF101474 - 0.035 14.0 1.3 0.044 13.7 1.3 1.1 1 0 0 1 1 1 0 Type-2 restriction enzyme D3 domain DUF3391 PF11871.8 ORF101474 - 0.2 12.2 3.9 0.22 12.0 3.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) zf-RING_4 PF14570.6 ORF101281 - 0.029 14.2 0.4 1.5 8.7 0.1 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain LCE6A PF15858.5 ORF101068 - 0.19 12.5 2.3 0.22 12.3 2.3 1.1 1 0 0 1 1 1 0 Late cornified envelope protein 6A family SpoU_methylase PF00588.19 ORF100984 - 1.7e-10 41.2 0.0 1.9e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family TM2 PF05154.16 ORF100808 - 0.035 14.4 0.8 0.046 14.1 0.8 1.2 1 0 0 1 1 1 0 TM2 domain QSregVF PF13652.6 ORF100470 - 0.087 12.8 0.0 0.087 12.8 0.0 1.0 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor Bile_Hydr_Trans PF04775.14 ORF100459 - 0.055 13.5 0.0 0.067 13.3 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA thioester hydrolase/BAAT N-terminal region DUF3677 PF12432.8 ORF100410 - 0.09 13.1 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3677) DASH_Dam1 PF08653.10 ORF100410 - 0.093 12.5 0.7 0.14 11.9 0.7 1.4 1 0 0 1 1 1 0 DASH complex subunit Dam1 DUF957 PF06117.11 ORF100345 - 0.054 13.1 0.1 0.077 12.6 0.1 1.2 1 0 0 1 1 1 0 Enterobacterial protein of unknown function (DUF957) Phage_TAC_6 PF09550.10 NODE_90035_length_180_cov_0.827586_g82094_i0forward_frame_2 - 0.037 14.5 0.2 0.05 14.0 0.2 1.2 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Y_Y_Y PF07495.13 NODE_90027_length_180_cov_0.827586_g82086_i0forward_frame_2 - 0.029 14.3 0.1 0.035 14.1 0.1 1.1 1 0 0 1 1 1 0 Y_Y_Y domain UCR_Fe-S_N PF10399.9 NODE_90026_length_180_cov_0.827586_g82085_i0forward_frame_3 - 0.15 11.4 0.1 0.2 11.0 0.1 1.2 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal UPF0228 PF05727.11 NODE_90018_length_180_cov_0.889655_g82077_i0reverse_frame_2 - 0.13 12.1 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0228) Atrophin-1 PF03154.15 NODE_90015_length_180_cov_0.903448_g82074_i0reverse_frame_3 - 0.06 11.6 8.7 0.058 11.7 8.7 1.0 1 0 0 1 1 1 0 Atrophin-1 family BES1_N PF05687.13 NODE_90015_length_180_cov_0.903448_g82074_i0reverse_frame_3 - 0.75 10.2 7.9 0.76 10.1 7.9 1.1 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal DUF3915 PF13054.6 NODE_90015_length_180_cov_0.903448_g82074_i0reverse_frame_3 - 1.3 9.0 7.0 1.6 8.7 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Kelch_6 PF13964.6 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 2.5e-09 37.1 0.5 7.4e-09 35.6 0.2 1.7 1 1 1 2 2 2 1 Kelch motif Kelch_3 PF13415.6 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 6.5e-06 26.3 0.0 7.7e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 1.3e-05 25.1 2.0 1.3e-05 25.1 1.4 1.4 1 1 0 1 1 1 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 3.1e-05 23.8 3.5 0.0012 18.8 1.8 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 3.4e-05 23.3 0.8 3.4e-05 23.3 0.8 1.5 2 0 0 2 2 2 1 Kelch motif Kelch_2 PF07646.15 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 0.0039 17.1 2.2 0.0055 16.6 1.2 1.8 1 1 1 2 2 2 1 Kelch motif Colipase PF01114.18 NODE_90013_length_180_cov_0.910345_g82072_i0forward_frame_2 - 0.044 13.5 2.3 0.062 13.0 2.3 1.2 1 0 0 1 1 1 0 Colipase, N-terminal domain Ammonium_transp PF00909.21 NODE_90008_length_180_cov_0.931034_g82067_i0forward_frame_3 - 0.0023 16.7 0.4 0.0026 16.5 0.4 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family FA_hydroxylase PF04116.13 NODE_90001_length_180_cov_0.986207_g82060_i0forward_frame_3 - 0.039 14.3 1.0 0.04 14.2 1.0 1.0 1 0 0 1 1 1 0 Fatty acid hydroxylase superfamily RCC1_2 PF13540.6 NODE_89999_length_180_cov_1.000000_g82058_i0reverse_frame_3 - 1e-07 31.6 3.3 0.00014 21.5 0.1 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF3402 PF11882.8 NODE_89997_length_180_cov_1.013793_g82056_i0reverse_frame_2 - 0.034 13.3 1.1 0.029 13.5 1.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3402) Pentapeptide PF00805.22 NODE_89996_length_180_cov_1.013793_g82055_i0reverse_frame_3 - 0.11 12.2 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (8 copies) Ephrin_rec_like PF07699.13 NODE_89996_length_180_cov_1.013793_g82055_i0reverse_frame_2 - 0.048 13.4 0.1 0.064 13.0 0.1 1.2 1 0 0 1 1 1 0 Putative ephrin-receptor like Pellino PF04710.14 NODE_89992_length_180_cov_1.020690_g82051_i0forward_frame_2 - 0.16 10.6 0.1 0.18 10.4 0.1 1.0 1 0 0 1 1 1 0 Pellino Mfa1 PF17445.2 NODE_89979_length_180_cov_1.068966_g82038_i0reverse_frame_3 - 0.079 13.0 0.6 0.079 13.0 0.6 1.9 2 1 0 2 2 2 0 Mating factor A1 Ank_3 PF13606.6 NODE_89978_length_180_cov_1.068966_g82037_i0reverse_frame_2 - 0.027 15.0 0.1 0.79 10.5 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat Ank_2 PF12796.7 NODE_89978_length_180_cov_1.068966_g82037_i0reverse_frame_2 - 0.04 14.5 0.0 0.046 14.3 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) zf-CCHC_4 PF14392.6 NODE_89970_length_180_cov_1.082759_g82029_i0reverse_frame_3 - 0.19 11.5 1.0 0.24 11.2 1.0 1.2 1 0 0 1 1 1 0 Zinc knuckle hEGF PF12661.7 NODE_89967_length_180_cov_1.082759_g82026_i0reverse_frame_3 - 0.081 13.6 1.0 0.12 13.0 1.0 1.3 1 0 0 1 1 1 0 Human growth factor-like EGF TypeIII_RM_meth PF12564.8 NODE_89963_length_180_cov_1.089655_g82022_i0forward_frame_2 - 0.1 12.8 0.5 0.14 12.3 0.5 1.2 1 0 0 1 1 1 0 Type III restriction/modification enzyme methylation subunit AZUL PF16558.5 NODE_89961_length_180_cov_1.089655_g82020_i0forward_frame_2 - 0.89 9.8 6.3 1.2 9.4 6.3 1.3 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A MINDY_DUB PF04424.13 NODE_89957_length_180_cov_1.089655_g82016_i0forward_frame_3 - 0.068 13.2 0.0 0.075 13.1 0.0 1.1 1 0 0 1 1 1 0 MINDY deubiquitinase zf-TRM13_CCCH PF11722.8 NODE_89957_length_180_cov_1.089655_g82016_i0forward_frame_2 - 0.0061 16.3 1.1 0.0061 16.3 1.1 2.0 2 0 0 2 2 2 1 CCCH zinc finger in TRM13 protein TMEM232 PF15877.5 NODE_89957_length_180_cov_1.089655_g82016_i0forward_frame_2 - 0.039 12.9 0.8 0.045 12.8 0.8 1.1 1 0 0 1 1 1 0 Transmembrane protein family 232 Sugar_tr PF00083.24 NODE_89951_length_180_cov_1.096552_g82010_i0reverse_frame_2 - 3.9e-14 52.4 7.2 4.1e-14 52.3 7.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_89951_length_180_cov_1.096552_g82010_i0reverse_frame_2 - 5.2e-10 38.8 8.5 5.5e-10 38.7 8.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_5 PF05631.14 NODE_89951_length_180_cov_1.096552_g82010_i0reverse_frame_2 - 0.003 16.5 0.2 0.0035 16.3 0.2 1.0 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM MFS_2 PF13347.6 NODE_89951_length_180_cov_1.096552_g82010_i0reverse_frame_2 - 0.0088 14.6 0.9 0.009 14.6 0.9 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF826 PF05696.11 NODE_89943_length_180_cov_1.096552_g82002_i0forward_frame_3 - 0.17 12.0 0.1 0.2 11.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF826) Popeye PF04831.13 NODE_89942_length_180_cov_1.096552_g82001_i0forward_frame_3 - 0.13 12.4 1.4 0.13 12.5 1.4 1.1 1 0 0 1 1 1 0 Popeye protein conserved region UCH_C PF18031.1 NODE_89939_length_180_cov_1.096552_g81998_i0forward_frame_3 - 0.16 11.9 1.5 0.27 11.1 0.1 2.1 2 1 1 3 3 3 0 Ubiquitin carboxyl-terminal hydrolases CFAP91 PF14738.6 NODE_89937_length_180_cov_1.096552_g81996_i0reverse_frame_2 - 0.019 15.0 0.0 0.021 14.9 0.0 1.0 1 0 0 1 1 1 0 Cilia- and flagella-associated protein 91 Pox_E10 PF04805.12 NODE_89937_length_180_cov_1.096552_g81996_i0forward_frame_2 - 8.6 6.3 6.3 6.7 6.7 1.0 2.1 1 1 1 2 2 2 0 E10-like protein conserved region Nop10p PF04135.12 NODE_89933_length_180_cov_1.096552_g81992_i0reverse_frame_3 - 0.093 12.8 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family DUF4462 PF14692.6 NODE_89931_length_180_cov_1.096552_g81990_i0reverse_frame_3 - 0.098 12.2 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) SEFIR PF08357.11 NODE_89930_length_180_cov_1.096552_g81989_i0forward_frame_3 - 0.045 14.0 0.0 0.052 13.8 0.0 1.1 1 0 0 1 1 1 0 SEFIR domain DUF1137 PF06587.11 NODE_89929_length_180_cov_1.096552_g81988_i0forward_frame_3 - 0.031 14.3 0.0 0.038 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1137) C1_2 PF03107.16 NODE_89928_length_180_cov_1.096552_g81987_i0reverse_frame_2 - 0.0099 16.2 0.7 0.013 15.8 0.7 1.2 1 0 0 1 1 1 1 C1 domain NinE PF05322.11 NODE_89928_length_180_cov_1.096552_g81987_i0forward_frame_2 - 0.032 14.1 0.2 0.044 13.7 0.2 1.1 1 0 0 1 1 1 0 NINE Protein T2SSJ PF11612.8 NODE_89926_length_180_cov_1.096552_g81985_i0reverse_frame_3 - 0.13 12.5 0.0 0.13 12.4 0.0 1.0 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein J DUF2614 PF11023.8 NODE_89924_length_180_cov_1.096552_g81983_i0reverse_frame_3 - 0.11 12.6 0.2 0.13 12.4 0.2 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain AIMP2_LysRS_bd PF16780.5 NODE_89924_length_180_cov_1.096552_g81983_i0forward_frame_2 - 0.12 12.1 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 AIMP2 lysyl-tRNA synthetase binding domain Prok_Ub PF14454.6 NODE_89922_length_180_cov_1.096552_g81981_i0forward_frame_2 - 0.1 12.3 0.0 0.15 11.8 0.0 1.3 1 1 0 1 1 1 0 Prokaryotic Ubiquitin Tachylectin PF14517.6 NODE_89921_length_180_cov_1.096552_g81980_i0reverse_frame_3 - 0.062 12.8 0.1 0.062 12.8 0.1 1.0 1 0 0 1 1 1 0 Tachylectin zf-P11 PF03854.14 NODE_89910_length_180_cov_1.103448_g81969_i0forward_frame_3 - 0.01 15.5 0.0 0.012 15.3 0.0 1.1 1 0 0 1 1 1 0 P-11 zinc finger Apq12 PF12716.7 NODE_89910_length_180_cov_1.103448_g81969_i0forward_frame_3 - 0.017 15.1 1.0 0.14 12.1 0.0 2.0 2 0 0 2 2 2 0 Nuclear pore assembly and biogenesis PAD_porph PF04371.15 NODE_89909_length_180_cov_1.103448_g81968_i0forward_frame_2 - 0.00015 21.2 0.1 0.00017 21.0 0.1 1.0 1 0 0 1 1 1 1 Porphyromonas-type peptidyl-arginine deiminase Cas_CXXC_CXXC PF09706.10 NODE_89903_length_180_cov_1.103448_g81962_i0reverse_frame_3 - 0.19 12.0 0.0 0.22 11.8 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) C4bp_oligo PF18453.1 NODE_89899_length_180_cov_1.103448_g81958_i0reverse_frame_2 - 0.062 13.5 0.0 0.072 13.3 0.0 1.1 1 0 0 1 1 1 0 Oligomerization domain of C4b-binding protein alpha DUF2890 PF11081.8 NODE_89896_length_180_cov_1.103448_g81955_i0reverse_frame_3 - 0.065 13.3 0.1 0.065 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) KAP PF05804.12 NODE_89889_length_180_cov_1.103448_g81948_i0forward_frame_3 - 0.05 11.7 0.2 0.053 11.7 0.2 1.0 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) ATP-synt_ab PF00006.25 NODE_89889_length_180_cov_1.103448_g81948_i0forward_frame_2 - 8.7e-17 61.5 0.0 9e-17 61.4 0.0 1.0 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain DUF4449 PF14613.6 NODE_89884_length_180_cov_1.103448_g81943_i0forward_frame_2 - 0.16 12.1 3.2 0.18 11.9 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) zf-BED PF02892.15 NODE_89880_length_180_cov_1.103448_g81939_i0forward_frame_3 - 0.28 11.2 1.3 0.36 10.9 0.5 1.6 1 1 0 1 1 1 0 BED zinc finger zf-H2C2_5 PF13909.6 NODE_89880_length_180_cov_1.103448_g81939_i0forward_frame_3 - 2.9 7.8 3.6 2 8.2 1.1 1.8 1 1 1 2 2 2 0 C2H2-type zinc-finger domain Rossmann-like PF10727.9 NODE_89870_length_180_cov_1.103448_g81929_i0reverse_frame_3 - 0.046 13.6 0.0 0.046 13.6 0.0 1.0 1 0 0 1 1 1 0 Rossmann-like domain PPR_3 PF13812.6 NODE_89869_length_180_cov_1.103448_g81928_i0reverse_frame_3 - 0.19 11.8 0.0 0.28 11.3 0.0 1.2 1 0 0 1 1 1 0 Pentatricopeptide repeat domain Peptidase_C1 PF00112.23 NODE_89864_length_180_cov_1.103448_g81923_i0forward_frame_2 - 0.035 14.2 0.1 0.039 14.0 0.1 1.0 1 0 0 1 1 1 0 Papain family cysteine protease Rad50_zn_hook PF04423.14 NODE_89858_length_180_cov_1.103448_g81917_i0reverse_frame_2 - 0.027 14.3 1.3 0.044 13.6 1.3 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif zf-HIT PF04438.16 NODE_89858_length_180_cov_1.103448_g81917_i0reverse_frame_2 - 0.084 12.8 2.0 0.11 12.4 2.0 1.3 1 0 0 1 1 1 0 HIT zinc finger DUF3767 PF12597.8 NODE_89857_length_180_cov_1.103448_g81916_i0forward_frame_2 - 0.028 14.2 0.0 0.031 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) zf-RanBP PF00641.18 NODE_89851_length_180_cov_1.103448_g81910_i0reverse_frame_2 - 0.53 9.6 8.1 0.79 9.1 8.1 1.2 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others Ins_P5_2-kin PF06090.12 NODE_89847_length_180_cov_1.103448_g81906_i0forward_frame_3 - 0.13 11.7 0.2 0.14 11.5 0.2 1.0 1 0 0 1 1 1 0 Inositol-pentakisphosphate 2-kinase Nudc_N PF14050.6 NODE_89847_length_180_cov_1.103448_g81906_i0forward_frame_2 - 1.2e-06 28.4 0.0 1.3e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. Mg_trans_NIPA PF05653.14 NODE_89845_length_180_cov_1.103448_g81904_i0reverse_frame_3 - 0.023 13.8 2.3 0.024 13.8 2.3 1.0 1 0 0 1 1 1 0 Magnesium transporter NIPA Sugar_tr PF00083.24 NODE_89840_length_180_cov_1.103448_g81899_i0forward_frame_2 - 1.1e-08 34.4 2.5 1.3e-08 34.1 2.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_89840_length_180_cov_1.103448_g81899_i0forward_frame_2 - 0.0043 16.0 0.6 0.0044 16.0 0.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4330 PF14221.6 NODE_89836_length_180_cov_1.103448_g81895_i0reverse_frame_3 - 0.02 15.1 0.1 0.021 15.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) PV-1 PF06637.11 NODE_89836_length_180_cov_1.103448_g81895_i0reverse_frame_3 - 0.042 12.7 0.1 0.045 12.6 0.1 1.0 1 0 0 1 1 1 0 PV-1 protein (PLVAP) DUF4379 PF14311.6 NODE_89835_length_180_cov_1.103448_g81894_i0reverse_frame_2 - 0.0049 17.2 0.1 0.0078 16.6 0.1 1.5 1 1 0 1 1 1 1 Probable Zinc-ribbon domain DUF4773 PF15998.5 NODE_89834_length_180_cov_1.103448_g81893_i0forward_frame_2 - 0.15 12.6 0.0 0.18 12.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4773) TTL PF03133.15 NODE_89830_length_180_cov_1.103448_g81889_i0forward_frame_3 - 0.0005 19.3 0.0 0.0005 19.3 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Qua1 PF16274.5 NODE_89809_length_180_cov_1.151724_g81868_i0reverse_frame_2 - 0.12 12.2 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Qua1 domain LmjF365940-deam PF14421.6 NODE_89808_length_180_cov_1.158621_g81867_i0forward_frame_3 - 0.081 12.5 0.8 0.084 12.5 0.8 1.0 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases DUF5530 PF17670.1 NODE_89807_length_180_cov_1.158621_g81866_i0forward_frame_2 - 0.19 11.5 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5530) DUF3185 PF11381.8 NODE_89802_length_180_cov_1.172414_g81861_i0reverse_frame_3 - 0.13 12.3 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) zf-RING_12 PF17976.1 NODE_89799_length_180_cov_1.186207_g81858_i0reverse_frame_2 - 0.05 13.9 0.3 0.053 13.8 0.3 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf_CCCH_4 PF18345.1 NODE_89796_length_180_cov_1.193103_g81855_i0forward_frame_2 - 0.0025 17.8 0.9 0.0025 17.8 0.9 1.7 2 0 0 2 2 2 1 Zinc finger domain PHD_4 PF16866.5 NODE_89787_length_180_cov_1.206897_g81846_i0reverse_frame_2 - 0.045 13.8 0.3 0.051 13.7 0.3 1.1 1 0 0 1 1 1 0 PHD-finger IDO PF01231.18 NODE_89787_length_180_cov_1.206897_g81846_i0forward_frame_2 - 0.21 10.3 0.0 0.22 10.3 0.0 1.0 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase MurJ PF03023.14 NODE_89786_length_180_cov_1.206897_g81845_i0forward_frame_2 - 3.3e-09 35.9 0.5 4.8e-09 35.3 0.5 1.3 1 0 0 1 1 1 1 Lipid II flippase MurJ XhlA PF10779.9 NODE_89771_length_180_cov_1.262069_g81830_i0reverse_frame_2 - 1 9.6 8.3 0.22 11.8 2.1 2.0 1 1 1 2 2 2 0 Haemolysin XhlA ORC4_C PF14629.6 NODE_89769_length_180_cov_1.262069_g81828_i0forward_frame_3 - 0.12 11.7 0.0 0.15 11.4 0.0 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus TraP PF07296.11 NODE_89768_length_180_cov_1.268966_g81827_i0reverse_frame_2 - 0.12 11.5 0.0 0.12 11.5 0.0 1.0 1 0 0 1 1 1 0 TraP protein TTL PF03133.15 NODE_89762_length_180_cov_1.268966_g81821_i0forward_frame_2 - 0.0086 15.2 0.0 0.0086 15.2 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Lamprin PF06403.11 NODE_89760_length_180_cov_1.275862_g81819_i0forward_frame_3 - 0.0047 16.9 4.8 0.0055 16.7 4.8 1.1 1 0 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_89760_length_180_cov_1.275862_g81819_i0forward_frame_2 - 0.016 15.2 1.6 0.018 15.0 1.6 1.1 1 0 0 1 1 1 0 Lamprin Fea1 PF07692.11 NODE_89758_length_180_cov_1.275862_g81817_i0forward_frame_2 - 0.13 11.2 0.1 0.13 11.2 0.1 1.0 1 0 0 1 1 1 0 Low iron-inducible periplasmic protein DUF1154 PF06631.11 NODE_89755_length_180_cov_1.282759_g81814_i0forward_frame_2 - 0.11 12.6 3.2 0.83 9.7 1.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1154) F-box PF00646.33 NODE_89754_length_180_cov_1.282759_g81813_i0reverse_frame_3 - 0.94 9.4 3.4 1.4 8.9 3.4 1.3 1 0 0 1 1 1 0 F-box domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks425.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks425.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks425.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks425.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:31:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Inhibitor_I67 PF11405.8 NODE_89750_length_180_cov_1.296552_g81809_i0forward_frame_2 - 0.04 14.2 0.1 0.084 13.1 0.1 1.5 2 0 0 2 2 2 0 Bromelain inhibitor VI Late_protein_L2 PF00513.18 NODE_89749_length_180_cov_1.296552_g81808_i0reverse_frame_3 - 0.04 12.9 0.1 0.042 12.9 0.1 1.0 1 0 0 1 1 1 0 Late Protein L2 DUF4668 PF15701.5 NODE_89745_length_180_cov_1.317241_g81804_i0reverse_frame_2 - 6 6.7 6.0 6.6 6.5 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) DUF1125 PF06563.11 NODE_89739_length_180_cov_1.344828_g81798_i0forward_frame_3 - 0.067 13.1 1.2 0.093 12.6 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1125) PGM_PMM_II PF02879.16 NODE_89734_length_180_cov_1.358621_g81793_i0reverse_frame_2 - 2.3e-10 41.0 0.1 2.5e-10 40.9 0.1 1.1 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 5-nucleotidase PF06189.12 NODE_89734_length_180_cov_1.358621_g81793_i0reverse_frame_2 - 0.047 12.6 0.1 0.047 12.6 0.1 1.0 1 0 0 1 1 1 0 5'-nucleotidase HigB-like_toxin PF05015.13 NODE_89731_length_180_cov_1.365517_g81790_i0reverse_frame_2 - 0.018 15.5 0.6 0.021 15.2 0.6 1.1 1 0 0 1 1 1 0 RelE-like toxin of type II toxin-antitoxin system HigB Lipoxygenase PF00305.19 NODE_89731_length_180_cov_1.365517_g81790_i0reverse_frame_2 - 0.047 12.1 0.1 0.049 12.0 0.1 1.0 1 0 0 1 1 1 0 Lipoxygenase PDDEXK_5 PF11645.8 NODE_89725_length_180_cov_1.372414_g81784_i0forward_frame_2 - 0.094 12.7 0.1 0.1 12.6 0.1 1.0 1 0 0 1 1 1 0 PD-(D/E)XK endonuclease Urate_ox_N PF06181.11 NODE_89724_length_180_cov_1.372414_g81783_i0reverse_frame_3 - 0.02 14.2 0.0 0.024 14.0 0.0 1.0 1 0 0 1 1 1 0 Urate oxidase N-terminal Methyltransf_7 PF03492.15 NODE_89722_length_180_cov_1.372414_g81781_i0reverse_frame_3 - 0.096 11.9 0.9 0.094 11.9 0.9 1.0 1 0 0 1 1 1 0 SAM dependent carboxyl methyltransferase YMF19 PF02326.15 NODE_89722_length_180_cov_1.372414_g81781_i0reverse_frame_2 - 1.6 9.5 6.4 1.9 9.3 6.4 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 ICAM_N PF03921.14 NODE_89706_length_180_cov_1.379310_g81765_i0forward_frame_3 - 0.12 12.1 0.1 0.15 11.7 0.1 1.2 1 1 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain HCMV_UL124 PF17609.2 NODE_89698_length_180_cov_1.413793_g81757_i0reverse_frame_3 - 0.16 12.2 2.8 0.2 11.9 2.8 1.1 1 0 0 1 1 1 0 Family of unknown function MHYT PF03707.16 NODE_89698_length_180_cov_1.413793_g81757_i0forward_frame_3 - 0.68 10.1 6.2 2.2 8.5 6.2 1.8 1 1 0 1 1 1 0 Bacterial signalling protein N terminal repeat Ada_Zn_binding PF02805.16 NODE_89692_length_180_cov_1.434483_g81751_i0reverse_frame_2 - 0.061 13.4 0.7 0.077 13.0 0.7 1.2 1 0 0 1 1 1 0 Metal binding domain of Ada POT1 PF02765.17 NODE_89689_length_180_cov_1.455172_g81748_i0forward_frame_3 - 0.045 13.6 0.0 0.05 13.4 0.0 1.0 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 PH_17 PF18012.1 NODE_89686_length_180_cov_1.468966_g81745_i0reverse_frame_2 - 0.021 14.6 0.6 0.026 14.3 0.6 1.2 1 0 0 1 1 1 0 PH domain SK_channel PF03530.14 NODE_89682_length_180_cov_1.496552_g81741_i0forward_frame_2 - 0.06 13.3 7.1 0.065 13.2 7.1 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel NOP5NT PF08156.13 NODE_89681_length_180_cov_1.496552_g81740_i0reverse_frame_2 - 0.016 15.5 0.0 0.02 15.3 0.0 1.1 1 0 0 1 1 1 0 NOP5NT (NUC127) domain HEAT_2 PF13646.6 NODE_89680_length_180_cov_1.503448_g81739_i0forward_frame_2 - 0.019 15.3 0.0 0.021 15.2 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats BRCT_2 PF16589.5 NODE_89678_length_180_cov_1.524138_g81737_i0forward_frame_2 - 3.2e-06 27.4 0.1 3.9e-06 27.2 0.1 1.2 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain Peptidase_C70 PF12385.8 NODE_89665_length_180_cov_1.600000_g81724_i0reverse_frame_3 - 0.018 15.0 0.1 0.019 15.0 0.1 1.1 1 0 0 1 1 1 0 Papain-like cysteine protease AvrRpt2 ATP-synt_Eps PF04627.13 NODE_89660_length_180_cov_1.613793_g81719_i0reverse_frame_3 - 0.043 13.8 0.2 0.092 12.7 0.1 1.6 1 1 1 2 2 2 0 Mitochondrial ATP synthase epsilon chain DUF4763 PF15960.5 NODE_89657_length_180_cov_1.613793_g81716_i0reverse_frame_2 - 0.0021 17.4 0.6 0.0024 17.2 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) DUF2575 PF10837.8 NODE_89657_length_180_cov_1.613793_g81716_i0forward_frame_3 - 0.0071 16.6 0.3 0.0084 16.4 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2575) Pox_VLTF3 PF04947.14 NODE_89651_length_180_cov_1.634483_g81710_i0reverse_frame_3 - 0.011 15.5 0.3 0.011 15.5 0.3 1.0 1 0 0 1 1 1 0 Poxvirus Late Transcription Factor VLTF3 like TMEM132D_C PF15706.5 NODE_89651_length_180_cov_1.634483_g81710_i0forward_frame_2 - 0.99 9.2 4.6 0.79 9.5 3.9 1.3 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term WBP-1 PF11669.8 NODE_89651_length_180_cov_1.634483_g81710_i0forward_frame_2 - 1.1 10.0 4.3 1.2 9.8 4.3 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 Nup188_C PF18378.1 NODE_89647_length_180_cov_1.641379_g81706_i0forward_frame_3 - 0.086 11.7 0.0 0.092 11.6 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain HEAT PF02985.22 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.0013 18.8 0.0 0.002 18.2 0.0 1.4 1 0 0 1 1 1 1 HEAT repeat DAHP_synth_2 PF01474.16 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.011 14.3 0.0 0.011 14.3 0.0 1.0 1 0 0 1 1 1 0 Class-II DAHP synthetase family CadC_C1 PF18500.1 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.028 14.6 0.0 0.031 14.4 0.0 1.0 1 0 0 1 1 1 0 CadC C-terminal domain 1 TIMELESS PF04821.14 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.071 12.4 0.0 0.081 12.2 0.0 1.0 1 0 0 1 1 1 0 Timeless protein CARD_2 PF16739.5 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.097 12.7 0.1 0.12 12.4 0.1 1.3 1 1 0 1 1 1 0 Caspase recruitment domain OSTMP1 PF09777.9 NODE_89642_length_180_cov_1.648276_g81701_i0forward_frame_3 - 0.12 11.7 0.1 0.12 11.7 0.1 1.0 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor OTT_1508_deam PF14441.6 NODE_89635_length_180_cov_1.648276_g81694_i0reverse_frame_3 - 0.0034 17.3 0.2 0.0034 17.3 0.2 1.1 1 0 0 1 1 1 1 OTT_1508-like deaminase Ribosomal_60s PF00428.19 NODE_89635_length_180_cov_1.648276_g81694_i0forward_frame_3 - 0.22 12.1 6.0 0.27 11.9 6.0 1.1 1 0 0 1 1 1 0 60s Acidic ribosomal protein Arf PF00025.21 NODE_89634_length_180_cov_1.648276_g81693_i0reverse_frame_2 - 0.087 12.3 0.0 0.087 12.3 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family ER-remodelling PF14755.6 NODE_89632_length_180_cov_1.648276_g81691_i0reverse_frame_2 - 0.038 14.3 1.6 0.04 14.2 1.6 1.1 1 0 0 1 1 1 0 Intracellular membrane remodeller SPEG_u2 PF16650.5 NODE_89630_length_180_cov_1.655172_g81689_i0forward_frame_2 - 0.02 15.1 1.5 0.026 14.7 1.5 1.3 1 1 0 1 1 1 0 Unstructured region on SPEG complex protein DUF5490 PF17593.2 NODE_89615_length_180_cov_1.655172_g81674_i0reverse_frame_2 - 0.11 12.5 0.8 0.16 12.0 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5490) HIT PF01230.23 NODE_89614_length_180_cov_1.655172_g81673_i0reverse_frame_2 - 6.9e-07 29.9 0.0 7.2e-07 29.9 0.0 1.0 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 NODE_89614_length_180_cov_1.655172_g81673_i0reverse_frame_2 - 1.5e-06 28.7 0.0 1.6e-06 28.6 0.0 1.0 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding ATP_bind_3 PF01171.20 NODE_89611_length_180_cov_1.675862_g81670_i0forward_frame_2 - 0.001 18.8 0.0 0.001 18.8 0.0 1.1 1 0 0 1 1 1 1 PP-loop family Peptidase_C78 PF07910.13 NODE_89608_length_180_cov_1.689655_g81667_i0forward_frame_3 - 0.11 11.9 0.0 0.12 11.9 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C78 Pkinase PF00069.25 NODE_89606_length_180_cov_1.696552_g81665_i0reverse_frame_2 - 1.2e-11 44.5 0.0 1.2e-11 44.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_89606_length_180_cov_1.696552_g81665_i0reverse_frame_2 - 1.2e-07 31.3 0.0 1.2e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pox_ser-thr_kin PF05445.11 NODE_89606_length_180_cov_1.696552_g81665_i0reverse_frame_2 - 0.00093 18.3 0.0 0.00095 18.2 0.0 1.0 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase APH PF01636.23 NODE_89606_length_180_cov_1.696552_g81665_i0reverse_frame_2 - 0.0049 16.8 0.0 0.0049 16.8 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family PRIMA1 PF16101.5 NODE_89606_length_180_cov_1.696552_g81665_i0forward_frame_2 - 0.014 15.4 2.6 0.016 15.2 2.6 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 TMEM156 PF15106.6 NODE_89604_length_180_cov_1.710345_g81663_i0reverse_frame_2 - 0.51 9.7 2.1 0.52 9.7 2.1 1.1 1 0 0 1 1 1 0 TMEM156 protein family SPOB_ab PF14682.6 NODE_89591_length_180_cov_1.772414_g81650_i0reverse_frame_2 - 0.12 12.5 0.1 0.12 12.4 0.1 1.0 1 0 0 1 1 1 0 Sporulation initiation phospho-transferase B, C-terminal EF-hand_5 PF13202.6 NODE_89591_length_180_cov_1.772414_g81650_i0forward_frame_3 - 0.021 14.3 0.1 0.021 14.3 0.1 2.0 3 0 0 3 3 3 0 EF hand EF-hand_6 PF13405.6 NODE_89591_length_180_cov_1.772414_g81650_i0forward_frame_3 - 0.091 12.7 1.2 0.2 11.7 1.1 1.7 1 1 0 1 1 1 0 EF-hand domain DUF2203 PF09969.9 NODE_89584_length_180_cov_1.841379_g81643_i0forward_frame_2 - 0.11 13.2 0.1 0.14 12.9 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) MAPEG PF01124.18 NODE_89579_length_180_cov_1.868966_g81638_i0reverse_frame_3 - 0.16 11.9 3.8 0.17 11.8 3.8 1.0 1 0 0 1 1 1 0 MAPEG family Ago_N_1 PF18351.1 NODE_89578_length_180_cov_1.868966_g81637_i0forward_frame_2 - 0.066 13.6 0.1 0.07 13.6 0.1 1.1 1 0 0 1 1 1 0 Fungal Argonaute N-terminal domain Fic_N PF13784.6 NODE_89569_length_180_cov_1.917241_g81628_i0forward_frame_2 - 0.044 13.8 0.0 0.046 13.7 0.0 1.1 1 0 0 1 1 1 0 Fic/DOC family N-terminal DUF4236 PF14020.6 NODE_89566_length_180_cov_1.924138_g81625_i0forward_frame_3 - 0.092 13.3 0.4 0.092 13.3 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4236) TetR_N PF00440.23 NODE_89562_length_180_cov_1.944828_g81621_i0forward_frame_2 - 0.16 11.8 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family CENP-B_N PF04218.13 NODE_89561_length_180_cov_1.951724_g81620_i0forward_frame_3 - 0.15 11.7 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Stealth_CR3 PF17102.5 NODE_89560_length_180_cov_1.958621_g81619_i0reverse_frame_3 - 0.048 13.6 0.1 0.062 13.2 0.1 1.2 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 DNA_pol_A_exo1 PF01612.20 NODE_89559_length_180_cov_1.979310_g81618_i0forward_frame_2 - 2.5e-08 33.8 0.1 2.5e-08 33.8 0.1 1.0 1 0 0 1 1 1 1 3'-5' exonuclease NOD2_WH PF17779.1 NODE_89559_length_180_cov_1.979310_g81618_i0forward_frame_2 - 0.013 15.8 0.0 0.016 15.5 0.0 1.1 1 0 0 1 1 1 0 NOD2 winged helix domain RunxI PF08504.11 NODE_89554_length_180_cov_2.006897_g81613_i0forward_frame_3 - 0.058 14.1 0.0 0.067 13.9 0.0 1.0 1 0 0 1 1 1 0 Runx inhibition domain TMCO5 PF14992.6 NODE_89552_length_180_cov_2.020690_g81611_i0reverse_frame_3 - 0.26 10.8 0.2 0.26 10.9 0.2 1.0 1 0 0 1 1 1 0 TMCO5 family Mucin15 PF15672.5 NODE_89552_length_180_cov_2.020690_g81611_i0forward_frame_2 - 0.014 14.9 0.9 0.015 14.9 0.9 1.0 1 0 0 1 1 1 0 Cell-membrane associated Mucin15 DUF2407_C PF13373.6 NODE_89552_length_180_cov_2.020690_g81611_i0forward_frame_2 - 0.014 15.5 0.0 0.015 15.4 0.0 1.0 1 0 0 1 1 1 0 DUF2407 C-terminal domain Fungal_trans_2 PF11951.8 NODE_89548_length_180_cov_2.041379_g81607_i0reverse_frame_3 - 0.027 13.3 0.1 0.03 13.2 0.1 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain DUF1043 PF06295.12 NODE_89548_length_180_cov_2.041379_g81607_i0reverse_frame_3 - 0.074 13.1 0.4 0.074 13.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) RabGAP-TBC PF00566.18 NODE_89548_length_180_cov_2.041379_g81607_i0reverse_frame_2 - 0.019 14.6 0.2 0.02 14.5 0.2 1.0 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Glypican PF01153.19 NODE_89548_length_180_cov_2.041379_g81607_i0reverse_frame_2 - 0.1 11.4 0.1 0.1 11.4 0.1 1.0 1 0 0 1 1 1 0 Glypican SAS-6_N PF16531.5 NODE_89542_length_180_cov_2.068966_g81601_i0reverse_frame_2 - 0.02 15.4 0.1 0.025 15.2 0.1 1.2 1 0 0 1 1 1 0 Centriolar protein SAS N-terminal CopD PF05425.13 NODE_89540_length_180_cov_2.075862_g81599_i0forward_frame_2 - 5.7e-09 36.3 0.9 6.6e-09 36.1 0.9 1.1 1 0 0 1 1 1 1 Copper resistance protein D cNMP_binding PF00027.29 NODE_89539_length_180_cov_2.075862_g81598_i0forward_frame_2 - 1.2e-08 34.9 0.0 1.3e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HARE-HTH PF05066.13 NODE_89536_length_180_cov_2.103448_g81595_i0reverse_frame_2 - 0.054 13.9 0.0 0.066 13.6 0.0 1.1 1 0 0 1 1 1 0 HB1, ASXL, restriction endonuclease HTH domain HEAT PF02985.22 NODE_89536_length_180_cov_2.103448_g81595_i0reverse_frame_2 - 0.12 12.7 0.0 0.22 11.9 0.0 1.5 2 0 0 2 2 2 0 HEAT repeat DAO_C PF16901.5 NODE_89535_length_180_cov_2.103448_g81594_i0forward_frame_3 - 0.18 11.7 1.1 2.2 8.2 0.3 2.0 1 1 1 2 2 2 0 C-terminal domain of alpha-glycerophosphate oxidase DUF2461 PF09365.10 NODE_89534_length_180_cov_2.103448_g81593_i0reverse_frame_3 - 0.17 11.8 0.0 0.18 11.8 0.0 1.0 1 0 0 1 1 1 0 Conserved hypothetical protein (DUF2461) Ank_3 PF13606.6 NODE_89530_length_180_cov_2.131034_g81589_i0forward_frame_3 - 0.039 14.5 0.0 0.059 13.9 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeat RSB_motif PF16294.5 NODE_89527_length_180_cov_2.144828_g81586_i0forward_frame_3 - 9.7 6.5 18.9 12 6.2 18.9 1.1 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif Atrophin-1 PF03154.15 NODE_89527_length_180_cov_2.144828_g81586_i0forward_frame_2 - 1.1 7.4 22.2 1.2 7.3 22.2 1.1 1 0 0 1 1 1 0 Atrophin-1 family STAG PF08514.11 NODE_89527_length_180_cov_2.144828_g81586_i0forward_frame_2 - 5 7.1 9.0 12 5.9 9.0 1.7 1 1 0 1 1 1 0 STAG domain DUF523 PF04463.12 NODE_89526_length_180_cov_2.151724_g81585_i0forward_frame_2 - 0.036 14.1 0.1 0.036 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF523) FAD_binding_2 PF00890.24 NODE_89525_length_180_cov_2.165517_g81584_i0reverse_frame_2 - 0.00095 18.3 0.0 0.00096 18.3 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 NODE_89525_length_180_cov_2.165517_g81584_i0reverse_frame_2 - 0.019 14.2 0.0 0.019 14.2 0.0 1.0 1 0 0 1 1 1 0 Thi4 family GP46 PF07409.12 NODE_89522_length_180_cov_2.179310_g81581_i0reverse_frame_2 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Phage protein GP46 Mannitol_dh PF01232.23 NODE_89522_length_180_cov_2.179310_g81581_i0forward_frame_2 - 1.1e-13 51.6 0.0 1.2e-13 51.5 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain GalKase_gal_bdg PF10509.9 NODE_89522_length_180_cov_2.179310_g81581_i0forward_frame_2 - 0.15 11.7 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Galactokinase galactose-binding signature DUF4403 PF14356.6 NODE_89515_length_180_cov_2.206897_g81574_i0reverse_frame_3 - 0.057 12.1 0.0 0.057 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4403) PEX-1N PF09262.11 NODE_89513_length_180_cov_2.206897_g81572_i0forward_frame_2 - 0.13 12.7 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Peroxisome biogenesis factor 1, N-terminal Dicty_CAD PF05720.12 NODE_89512_length_180_cov_2.213793_g81571_i0reverse_frame_3 - 0.1 12.6 0.1 0.13 12.2 0.1 1.3 1 1 0 1 1 1 0 Cell-cell adhesion domain DUF2002 PF09400.10 NODE_89512_length_180_cov_2.213793_g81571_i0forward_frame_2 - 1.5e-31 108.7 0.3 1.6e-31 108.6 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2002) MotA_ExbB PF01618.16 NODE_89507_length_180_cov_2.262069_g81566_i0forward_frame_3 - 0.012 15.4 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family DUF413 PF04219.12 NODE_89507_length_180_cov_2.262069_g81566_i0forward_frame_2 - 0.061 13.4 0.1 0.061 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF DUF4658 PF15555.6 NODE_89505_length_180_cov_2.303448_g81564_i0forward_frame_3 - 0.031 14.4 0.4 0.034 14.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) zf-Sec23_Sec24 PF04810.15 NODE_89503_length_180_cov_2.317241_g81562_i0forward_frame_3 - 0.17 12.0 2.4 1.4 9.0 0.0 2.5 2 1 0 2 2 2 0 Sec23/Sec24 zinc finger SPC22 PF04573.12 NODE_89499_length_180_cov_2.365517_g81558_i0forward_frame_2 - 0.035 13.6 0.6 0.039 13.4 0.6 1.0 1 0 0 1 1 1 0 Signal peptidase subunit DUF1251 PF06856.11 NODE_89499_length_180_cov_2.365517_g81558_i0forward_frame_2 - 0.037 13.7 0.2 0.037 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1251) MalF_P2 PF14785.6 NODE_89499_length_180_cov_2.365517_g81558_i0forward_frame_2 - 0.053 13.5 0.1 0.054 13.5 0.1 1.0 1 0 0 1 1 1 0 Maltose transport system permease protein MalF P2 domain Phage_holin_2_1 PF04971.12 NODE_89497_length_180_cov_2.393103_g81556_i0reverse_frame_2 - 0.0057 16.6 0.0 0.007 16.3 0.0 1.1 1 0 0 1 1 1 1 Bacteriophage P21 holin S Glyco_hydro_72 PF03198.14 NODE_89495_length_180_cov_2.413793_g81554_i0reverse_frame_2 - 5.7e-09 35.7 0.1 5.9e-09 35.6 0.1 1.0 1 0 0 1 1 1 1 Glucanosyltransferase NTP_transferase PF00483.23 NODE_89490_length_180_cov_2.462069_g81549_i0forward_frame_3 - 1.6e-10 41.0 0.0 1.7e-10 40.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase GerA PF03323.13 NODE_89489_length_180_cov_2.468966_g81548_i0reverse_frame_2 - 0.28 9.6 2.7 0.26 9.7 2.7 1.0 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein AA_permease_2 PF13520.6 NODE_89488_length_180_cov_2.510345_g81547_i0forward_frame_3 - 3.1e-10 39.5 0.4 3.2e-10 39.4 0.4 1.0 1 0 0 1 1 1 1 Amino acid permease Sar8_2 PF03058.14 NODE_89487_length_180_cov_2.517241_g81546_i0reverse_frame_3 - 0.083 13.4 1.9 0.14 12.7 1.9 1.4 1 0 0 1 1 1 0 Sar8.2 family zf_Hakai PF18408.1 NODE_89487_length_180_cov_2.517241_g81546_i0forward_frame_2 - 0.27 11.0 2.9 2.4 7.9 0.1 2.2 2 0 0 2 2 2 0 C2H2 Hakai zinc finger domain ABC_tran PF00005.27 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 3.9e-06 27.4 0.3 5.3e-06 27.0 0.3 1.3 1 1 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 4.3e-06 26.7 0.4 2.5e-05 24.3 0.4 1.9 1 1 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.00081 19.8 0.0 0.0009 19.7 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.00098 18.8 0.2 0.0029 17.3 0.2 1.7 1 1 1 2 2 2 1 P-loop containing region of AAA domain T2SSE PF00437.20 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0032 16.6 0.1 0.0037 16.4 0.1 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.005 17.1 0.2 0.011 16.0 0.1 1.5 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0067 16.2 0.0 0.0067 16.2 0.0 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_23 PF13476.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0079 16.7 2.1 0.011 16.3 1.7 1.6 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.011 15.8 0.4 0.016 15.3 0.1 1.4 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_28 PF13521.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.016 15.5 0.1 0.021 15.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain Septin PF00735.18 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.018 14.3 0.0 0.026 13.8 0.0 1.2 1 0 0 1 1 1 0 Septin cobW PF02492.19 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.019 14.6 0.2 0.026 14.1 0.1 1.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DLIC PF05783.11 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.019 13.8 0.0 0.019 13.8 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_24 PF13479.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.022 14.5 0.1 0.051 13.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.027 14.2 0.0 0.041 13.6 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_7 PF12775.7 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.029 13.9 0.0 0.03 13.8 0.0 1.0 1 0 0 1 1 1 0 P-loop containing dynein motor region FtsK_SpoIIIE PF01580.18 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.034 13.5 0.0 0.034 13.5 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_30 PF13604.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.041 13.6 0.2 0.041 13.6 0.2 1.3 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.046 13.0 0.0 0.046 13.0 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA_25 PF13481.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.047 13.3 0.0 0.047 13.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.056 13.4 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain MobB PF03205.14 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.058 13.3 0.1 0.084 12.8 0.1 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NACHT PF05729.12 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.063 13.2 0.1 0.084 12.8 0.1 1.2 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.097 12.8 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.13 12.3 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.15 12.6 0.2 0.26 11.9 0.1 1.5 2 0 0 2 2 2 0 AAA domain VAPB_antitox PF02697.14 NODE_89482_length_180_cov_2.606897_g81541_i0reverse_frame_3 - 0.059 14.2 0.1 4.9 8.0 0.0 2.0 2 0 0 2 2 2 0 Putative antitoxin SCA7 PF08313.12 NODE_89481_length_180_cov_2.606897_g81540_i0forward_frame_3 - 0.0034 17.2 0.7 0.0052 16.7 0.7 1.3 1 0 0 1 1 1 1 SCA7, zinc-binding domain GPR_Gpa2_C PF11970.8 NODE_89480_length_180_cov_2.613793_g81539_i0forward_frame_3 - 0.085 12.9 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term DUF5325 PF17259.2 NODE_89478_length_180_cov_2.648276_g81537_i0reverse_frame_3 - 0.036 13.9 0.1 0.05 13.5 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5325) Flavi_NS4A PF01350.17 NODE_89477_length_180_cov_2.662069_g81536_i0reverse_frame_3 - 0.029 14.3 0.0 0.029 14.3 0.0 1.0 1 0 0 1 1 1 0 Flavivirus non-structural protein NS4A ODV-E18 PF10717.9 NODE_89466_length_180_cov_2.882759_g81525_i0forward_frame_3 - 0.062 13.2 0.1 0.072 13.0 0.1 1.1 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 CitMHS_2 PF16980.5 NODE_89466_length_180_cov_2.882759_g81525_i0forward_frame_2 - 0.14 10.8 0.4 0.16 10.6 0.4 1.0 1 0 0 1 1 1 0 Putative citrate transport BPL_LplA_LipB PF03099.19 NODE_89460_length_180_cov_3.179310_g81519_i0reverse_frame_2 - 0.088 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Biotin/lipoate A/B protein ligase family Sec2p PF06428.11 NODE_89459_length_180_cov_3.262069_g81518_i0reverse_frame_3 - 0.024 14.6 2.7 0.028 14.4 2.7 1.0 1 0 0 1 1 1 0 GDP/GTP exchange factor Sec2p CYSTM PF12734.7 NODE_89457_length_180_cov_3.282759_g81516_i0reverse_frame_3 - 0.0018 18.5 3.8 0.0022 18.2 3.8 1.3 1 0 0 1 1 1 1 Cysteine-rich TM module stress tolerance NAPRTase PF04095.16 NODE_89453_length_180_cov_3.503448_g81512_i0reverse_frame_2 - 2.2e-19 70.0 0.0 2.3e-19 70.0 0.0 1.0 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family RhoGEF67_u1 PF16615.5 NODE_89451_length_180_cov_3.558621_g81510_i0forward_frame_2 - 0.47 11.0 3.6 0.17 12.4 1.3 1.4 2 0 0 2 2 2 0 Unstructured region one on RhoGEF 6 and 7 PPR_3 PF13812.6 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 3.9e-06 26.8 0.0 5.4e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 2.4e-05 24.4 0.0 2.6e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 PPR repeat family PPR PF01535.20 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 8.7e-05 22.5 0.0 0.00015 21.8 0.0 1.4 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 0.00064 19.4 0.0 0.044 13.5 0.0 2.1 2 0 0 2 2 2 1 PPR repeat TPR_4 PF07721.14 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 0.0051 17.3 0.5 0.0051 17.3 0.5 1.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 0.0056 17.4 0.1 0.0066 17.2 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat PPR_long PF17177.4 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 0.011 15.1 0.0 0.014 14.8 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Hydrophob_seed PF14547.6 NODE_89443_length_180_cov_10.365517_g81502_i0forward_frame_3 - 0.016 15.4 2.3 0.018 15.2 2.3 1.3 1 1 0 1 1 1 0 Hydrophobic seed protein Stomagen PF16851.5 NODE_89441_length_180_cov_11.427586_g81500_i0forward_frame_2 - 0.039 14.0 0.2 0.06 13.4 0.2 1.3 1 0 0 1 1 1 0 Stomagen DmpG_comm PF07836.11 NODE_89428_length_180_cov_24.117241_g81487_i0reverse_frame_2 - 0.0068 15.9 0.0 0.0091 15.5 0.0 1.1 1 0 0 1 1 1 1 DmpG-like communication domain RsmJ PF04378.13 NODE_89427_length_180_cov_24.213793_g81486_i0forward_frame_2 - 0.063 12.5 0.0 0.064 12.5 0.0 1.0 1 0 0 1 1 1 0 Ribosomal RNA large subunit methyltransferase D, RlmJ DUF5484 PF17583.2 NODE_89426_length_180_cov_25.255172_g81485_i0reverse_frame_2 - 0.042 13.5 0.0 0.053 13.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5484) Anophelin PF10731.9 NODE_89426_length_180_cov_25.255172_g81485_i0reverse_frame_2 - 0.16 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Thrombin inhibitor from mosquito DUF5365 PF17326.2 NODE_89425_length_180_cov_26.062069_g81484_i0reverse_frame_2 - 0.029 14.8 0.1 0.033 14.6 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5365) DUF5436 PF17504.2 NODE_89424_length_180_cov_26.103448_g81483_i0reverse_frame_3 - 0.013 15.8 1.6 0.015 15.6 1.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5436) MFS_1_like PF12832.7 NODE_89421_length_180_cov_27.282759_g81480_i0forward_frame_3 - 0.11 11.3 0.2 0.11 11.3 0.2 1.1 1 0 0 1 1 1 0 MFS_1 like family DCB PF16213.5 NODE_89420_length_180_cov_27.993103_g81479_i0reverse_frame_3 - 0.0021 17.8 1.7 0.0022 17.7 1.7 1.0 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 TORC_N PF12884.7 NODE_89420_length_180_cov_27.993103_g81479_i0reverse_frame_3 - 0.025 15.3 0.8 0.029 15.1 0.8 1.1 1 0 0 1 1 1 0 Transducer of regulated CREB activity, N terminus Arc_PepC_II PF06847.11 NODE_89420_length_180_cov_27.993103_g81479_i0reverse_frame_3 - 0.19 12.3 0.9 0.19 12.2 0.9 1.0 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II DUF4448 PF14610.6 NODE_89419_length_180_cov_28.455172_g81478_i0forward_frame_3 - 0.019 14.8 0.1 0.021 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) DNA_binding_1 PF01035.20 NODE_89418_length_180_cov_28.903448_g81477_i0reverse_frame_3 - 0.13 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, DNA binding domain MNHE PF01899.16 NODE_89418_length_180_cov_28.903448_g81477_i0forward_frame_3 - 2 8.1 6.4 2.1 8.1 6.4 1.0 1 0 0 1 1 1 0 Na+/H+ ion antiporter subunit IBB PF01749.20 NODE_89415_length_180_cov_30.179310_g81474_i0reverse_frame_3 - 0.2 12.1 7.7 0.24 11.9 7.7 1.1 1 0 0 1 1 1 0 Importin beta binding domain SR-25 PF10500.9 NODE_89414_length_180_cov_30.337931_g81473_i0reverse_frame_2 - 2 8.0 9.1 2.1 7.9 9.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein TT_ORF1 PF02956.14 NODE_89414_length_180_cov_30.337931_g81473_i0forward_frame_2 - 0.42 9.2 7.1 0.45 9.1 7.1 1.0 1 0 0 1 1 1 0 TT viral orf 1 SRP40_C PF05022.12 NODE_89411_length_180_cov_31.627586_g81470_i0reverse_frame_3 - 0.45 11.4 7.9 0.53 11.2 7.9 1.4 1 1 0 1 1 1 0 SRP40, C-terminal domain BCMA-Tall_bind PF09257.10 NODE_89409_length_180_cov_32.337931_g81468_i0reverse_frame_3 - 0.0039 17.2 4.3 0.0039 17.2 4.3 1.7 2 0 0 2 2 2 1 BCMA, TALL-1 binding zf-rbx1 PF12678.7 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 4e-06 27.0 0.3 5.3e-06 26.6 0.3 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 7.5e-06 25.7 0.4 9.7e-06 25.3 0.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.00011 22.5 0.3 0.00013 22.2 0.3 1.1 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.00032 20.6 0.6 0.00043 20.2 0.6 1.2 1 0 0 1 1 1 1 zinc-RING finger domain Zn-ribbon_8 PF09723.10 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.0054 16.8 0.7 0.0076 16.4 0.7 1.2 1 0 0 1 1 1 1 Zinc ribbon domain zf-C3HC4 PF00097.25 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.023 14.6 0.3 0.033 14.0 0.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.044 13.8 0.1 0.059 13.4 0.1 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.12 12.3 1.7 0.21 11.4 1.7 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 UPF0547 PF10571.9 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 1.3 9.2 7.7 4.9 7.3 2.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 SLC3A2_N PF16028.5 NODE_89404_length_180_cov_33.834483_g81463_i0forward_frame_2 - 3.2 7.4 4.7 1.1 8.8 0.2 1.9 1 1 1 2 2 2 0 Solute carrier family 3 member 2 N-terminus Croc_4 PF17691.1 NODE_89403_length_180_cov_33.986207_g81462_i0forward_frame_2 - 0.055 13.5 1.0 0.057 13.5 1.0 1.0 1 0 0 1 1 1 0 Contingent replication of cDNA 4 CDP-OH_P_transf PF01066.21 NODE_89402_length_180_cov_34.358621_g81461_i0forward_frame_2 - 0.81 10.5 3.7 1 10.2 3.7 1.1 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase FixP_N PF14715.6 NODE_89402_length_180_cov_34.358621_g81461_i0forward_frame_2 - 3.6 7.4 16.9 1 9.1 5.5 2.1 2 0 0 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Glyco_transf_8 PF01501.20 NODE_89401_length_180_cov_34.420690_g81460_i0reverse_frame_2 - 0.0027 17.3 0.1 0.0032 17.0 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 8 DUF2733 PF10813.8 NODE_89396_length_180_cov_36.055172_g81455_i0forward_frame_3 - 0.53 10.1 3.1 9.9 6.0 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) LAGLIDADG_1 PF00961.19 NODE_89395_length_180_cov_37.841379_g81454_i0reverse_frame_2 - 0.0051 17.8 0.0 0.0065 17.4 0.0 1.2 1 0 0 1 1 1 1 LAGLIDADG endonuclease ALS2CR11 PF15729.5 NODE_89393_length_180_cov_38.641379_g81452_i0forward_frame_3 - 0.029 13.5 0.1 0.029 13.5 0.1 1.1 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 candidate 11 DUF716 PF04819.12 NODE_89392_length_180_cov_38.806897_g81451_i0reverse_frame_3 - 0.13 11.9 3.7 0.13 11.9 3.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF716) CRM1_repeat PF18777.1 NODE_89389_length_180_cov_42.296552_g81448_i0forward_frame_3 - 0.19 11.3 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat DUF3341 PF11821.8 NODE_89385_length_180_cov_46.220690_g81444_i0forward_frame_2 - 0.071 12.8 1.4 0.077 12.6 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) CXCL17 PF15211.6 NODE_89384_length_180_cov_46.579310_g81443_i0reverse_frame_2 - 0.031 15.0 1.1 0.036 14.8 1.1 1.1 1 0 0 1 1 1 0 VEGF co-regulated chemokine 1 YebO PF13974.6 NODE_89379_length_180_cov_49.082759_g81438_i0reverse_frame_3 - 0.061 13.4 0.6 0.061 13.4 0.6 1.6 1 1 1 2 2 2 0 YebO-like protein DUF4995 PF16386.5 NODE_89379_length_180_cov_49.082759_g81438_i0forward_frame_3 - 0.11 12.4 0.6 0.16 12.0 0.6 1.3 1 1 0 1 1 1 0 Domain of unknown function ETRAMP PF09716.10 NODE_89379_length_180_cov_49.082759_g81438_i0forward_frame_3 - 2.4 8.3 4.5 0.78 9.8 1.9 1.6 1 1 1 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Med30 PF11315.8 NODE_89376_length_180_cov_54.503448_g81435_i0reverse_frame_3 - 0.036 14.3 0.8 0.042 14.0 0.8 1.1 1 0 0 1 1 1 0 Mediator complex subunit 30 zf_UBZ PF18439.1 NODE_89374_length_180_cov_58.379310_g81433_i0forward_frame_2 - 0.052 13.2 0.1 0.079 12.6 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger TraX PF05857.11 NODE_89369_length_180_cov_59.772414_g81428_i0reverse_frame_3 - 0.034 14.2 0.0 0.037 14.1 0.0 1.0 1 0 0 1 1 1 0 TraX protein HNH PF01844.23 NODE_89369_length_180_cov_59.772414_g81428_i0forward_frame_2 - 0.059 13.6 0.0 0.079 13.1 0.0 1.2 1 0 0 1 1 1 0 HNH endonuclease TBP PF00352.21 NODE_89368_length_180_cov_60.165517_g81427_i0forward_frame_3 - 0.11 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Transcription factor TFIID (or TATA-binding protein, TBP) STPPase_N PF16891.5 NODE_89366_length_180_cov_63.186207_g81425_i0reverse_frame_3 - 0.1 13.0 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain RNA_POL_M_15KD PF02150.16 NODE_89366_length_180_cov_63.186207_g81425_i0forward_frame_3 - 0.068 13.0 2.7 0.083 12.8 1.9 1.6 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit Phage_capsid PF05065.13 NODE_89366_length_180_cov_63.186207_g81425_i0forward_frame_2 - 0.13 11.6 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Phage capsid family LodA_C PF18417.1 NODE_89364_length_180_cov_64.206897_g81423_i0reverse_frame_3 - 0.023 14.4 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 L-lysine epsilon oxidase C-terminal domain SoxG PF04268.12 NODE_89359_length_180_cov_70.000000_g81418_i0reverse_frame_2 - 0.032 14.4 0.0 0.032 14.4 0.0 1.2 1 0 0 1 1 1 0 Sarcosine oxidase, gamma subunit family DUF2525 PF10733.9 NODE_89357_length_180_cov_74.441379_g81416_i0forward_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2525) PIG-Y PF15159.6 NODE_89340_length_180_cov_139.075862_g81399_i0forward_frame_3 - 0.048 14.6 0.9 0.061 14.3 0.9 1.1 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks426.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks426.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks426.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks426.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:21:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks427.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks427.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks427.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks427.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:22:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PUF PF00806.19 NODE_19405_length_1001_cov_52.771222_g14838_i0forward_frame_1 - 1.6e-26 90.4 6.9 3.9e-06 26.3 0.1 4.4 4 0 0 4 4 4 4 Pumilio-family RNA binding repeat EloA-BP1 PF15870.5 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_1 - 0.095 13.0 1.7 0.14 12.4 1.2 1.5 1 1 0 1 1 1 0 ElonginA binding-protein 1 PrsW-protease PF13367.6 ORF99917 - 1.4e-17 63.8 0.1 2.9e-17 62.8 0.1 1.6 1 0 0 1 1 1 1 PrsW family intramembrane metalloprotease DctQ PF04290.12 ORF99917 - 6 6.8 15.0 43 4.0 8.1 3.4 4 0 0 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component adh_short PF00106.25 ORF97539 - 1e-23 83.8 0.0 5e-22 78.3 0.0 2.1 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF97539 - 1.9e-13 50.5 0.0 2.8e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF97539 - 2e-08 34.4 0.0 3.5e-08 33.6 0.0 1.5 1 0 0 1 1 1 1 KR domain YjeF_N PF03853.15 ORF97539 - 0.0096 15.8 0.2 0.098 12.5 0.0 2.2 2 0 0 2 2 2 1 YjeF-related protein N-terminus Epimerase PF01370.21 ORF97539 - 0.018 14.5 0.0 0.043 13.3 0.0 1.8 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Pyr_redox_3 PF13738.6 ORF97539 - 0.019 14.3 0.0 0.024 13.9 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AAA PF00004.29 ORF96060 - 3.2e-17 63.2 0.0 5.1e-17 62.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 ORF96060 - 3.7e-15 56.1 0.0 7.1e-13 48.6 0.0 2.3 1 1 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 ORF96060 - 1.3e-13 51.1 0.0 4.6e-13 49.4 0.0 1.9 2 0 0 2 2 1 1 Replication factor C C-terminal domain Rad17 PF03215.15 ORF96060 - 1.4e-10 41.4 0.0 3.4e-10 40.1 0.0 1.6 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_30 PF13604.6 ORF96060 - 4.1e-07 29.9 0.0 7.9e-07 29.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 ORF96060 - 1.4e-06 28.6 0.2 0.00013 22.3 0.2 2.6 1 1 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF96060 - 3.4e-06 27.0 0.4 9.3e-06 25.6 0.4 1.6 1 1 0 1 1 1 1 AAA domain AAA_7 PF12775.7 ORF96060 - 3.8e-06 26.6 0.1 6e-06 25.9 0.1 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 ORF96060 - 4.6e-06 27.1 0.0 2.3e-05 24.9 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF96060 - 5e-06 26.6 0.1 1.7e-05 24.8 0.0 1.9 2 0 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 ORF96060 - 9.8e-06 25.6 0.0 1.7e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 ORF96060 - 4.3e-05 22.8 0.0 8.5e-05 21.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_3 PF07726.11 ORF96060 - 5e-05 23.2 0.0 9.6e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 ORF96060 - 0.00011 22.0 0.0 0.00019 21.2 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 ORF96060 - 0.0002 21.7 0.4 0.0012 19.2 0.4 2.0 1 1 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 ORF96060 - 0.00048 20.4 0.0 0.0016 18.8 0.0 1.9 2 0 0 2 2 1 1 AAA C-terminal domain DNA_pol3_delta PF06144.13 ORF96060 - 0.00049 19.9 0.1 0.00077 19.3 0.1 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit PhoH PF02562.16 ORF96060 - 0.00068 19.1 0.1 0.83 9.1 0.0 2.3 2 0 0 2 2 2 2 PhoH-like protein ResIII PF04851.15 ORF96060 - 0.0015 18.5 0.2 0.009 16.0 0.1 1.9 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit Viral_helicase1 PF01443.18 ORF96060 - 0.0019 18.0 0.0 0.0029 17.4 0.0 1.3 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase DEAD PF00270.29 ORF96060 - 0.0031 17.3 0.7 0.14 11.9 0.0 2.5 1 1 1 2 2 2 1 DEAD/DEAH box helicase TniB PF05621.11 ORF96060 - 0.0035 16.8 1.0 0.076 12.4 0.3 2.6 1 1 1 2 2 2 1 Bacterial TniB protein TIP49 PF06068.13 ORF96060 - 0.0063 15.8 0.2 0.013 14.7 0.2 1.6 1 1 0 1 1 1 1 TIP49 P-loop domain RNA_helicase PF00910.22 ORF96060 - 0.0082 16.5 0.1 0.021 15.2 0.1 1.7 1 1 0 1 1 1 1 RNA helicase SRP54 PF00448.22 ORF96060 - 0.0087 15.7 0.0 0.022 14.4 0.0 1.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_28 PF13521.6 ORF96060 - 0.009 16.3 0.0 0.017 15.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF96060 - 0.0094 16.5 0.1 0.12 12.9 0.0 2.0 1 1 1 2 2 2 1 ABC transporter FtsK_SpoIIIE PF01580.18 ORF96060 - 0.0097 15.3 0.0 0.017 14.5 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_24 PF13479.6 ORF96060 - 0.01 15.6 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF96060 - 0.014 15.1 0.1 0.16 11.7 0.1 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain T2SSE PF00437.20 ORF96060 - 0.026 13.6 0.0 0.043 12.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Mg_chelatase PF01078.21 ORF96060 - 0.027 13.9 0.1 0.095 12.1 0.0 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Torsin PF06309.11 ORF96060 - 0.036 14.2 0.0 0.092 12.8 0.0 1.7 2 0 0 2 2 1 0 Torsin NACHT PF05729.12 ORF96060 - 0.036 14.0 0.1 0.75 9.7 0.1 2.3 1 1 0 1 1 1 0 NACHT domain AAA_8 PF12780.7 ORF96060 - 0.048 13.0 0.1 0.074 12.4 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 MCM PF00493.23 ORF96060 - 0.05 12.7 0.0 0.08 12.0 0.0 1.3 1 0 0 1 1 1 0 MCM P-loop domain AAA_6 PF12774.7 ORF96060 - 0.051 12.5 0.0 0.089 11.7 0.0 1.4 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region DUF2075 PF09848.9 ORF96060 - 0.077 12.2 0.0 0.17 11.1 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TsaE PF02367.17 ORF96060 - 0.082 12.9 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 ORF96060 - 0.093 12.5 0.1 0.18 11.5 0.1 1.5 1 1 0 1 1 1 0 IstB-like ATP binding protein AAA_18 PF13238.6 ORF96060 - 0.097 13.2 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_2 PF07724.14 ORF96060 - 0.13 12.3 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Hydin_ADK PF17213.3 ORF96060 - 0.15 12.3 0.1 0.24 11.7 0.1 1.3 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 ORF96060 - 0.17 12.0 0.2 0.33 11.1 0.2 1.6 1 1 0 1 1 1 0 AAA domain DUF4047 PF13256.6 ORF92120 - 2.2 8.5 5.4 7.4 6.8 4.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) KH_6 PF15985.5 ORF91361 - 2.6e-09 37.3 0.4 6e-09 36.1 0.4 1.6 1 0 0 1 1 1 1 KH domain ECR1_N PF14382.6 ORF91361 - 1.9e-07 30.8 0.3 4.4e-07 29.6 0.3 1.7 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region EamA PF00892.20 ORF89430 - 3.1e-11 43.6 22.0 4.6e-07 30.1 5.0 2.2 2 0 0 2 2 2 2 EamA-like transporter family Nuc_sug_transp PF04142.15 ORF89430 - 1.1 8.3 4.7 8.3 5.5 4.7 2.0 1 1 0 1 1 1 0 Nucleotide-sugar transporter FAD_binding_3 PF01494.19 ORF89378 - 8.7e-15 54.8 0.1 1.1e-14 54.4 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF89378 - 0.0037 16.4 0.0 0.019 14.0 0.0 1.9 2 0 0 2 2 2 1 Squalene epoxidase Ricin_B_lectin PF00652.22 ORF87875 - 2.3e-18 66.6 12.4 5.7e-08 33.1 1.0 3.9 1 1 3 4 4 4 4 Ricin-type beta-trefoil lectin domain DUF4138 PF13595.6 ORF87875 - 0.064 12.5 0.0 0.17 11.1 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4138) DUF3439 PF11921.8 ORF87875 - 7.1 6.6 16.2 14 5.7 16.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) DUF2442 PF10387.9 ORF86950 - 0.044 14.1 0.0 0.094 13.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2442) NOA36 PF06524.12 ORF86950 - 9 5.5 9.7 14 4.9 9.7 1.2 1 0 0 1 1 1 0 NOA36 protein FAD_binding_3 PF01494.19 ORF86268 - 8.7e-15 54.8 0.1 1.1e-14 54.4 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF86268 - 0.0037 16.4 0.0 0.019 14.0 0.0 1.9 2 0 0 2 2 2 1 Squalene epoxidase FAD_binding_3 PF01494.19 ORF86262 - 8.7e-15 54.8 0.1 1.1e-14 54.4 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF86262 - 0.0037 16.4 0.0 0.019 14.0 0.0 1.9 2 0 0 2 2 2 1 Squalene epoxidase ABC_tran PF00005.27 ORF75591 - 8.6e-32 110.5 0.0 1.2e-31 110.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 ORF75591 - 3.6e-19 69.0 0.3 7e-19 68.1 0.3 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 ORF75591 - 0.0036 16.8 0.0 0.0065 15.9 0.0 1.4 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF75591 - 0.005 16.7 0.1 0.9 9.3 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF75591 - 0.0076 16.2 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase IstB_IS21 PF01695.17 ORF75591 - 0.009 15.8 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF75591 - 0.0095 16.2 1.4 0.028 14.7 1.4 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF75591 - 0.014 15.8 0.0 0.021 15.2 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 ORF75591 - 0.027 14.2 0.1 0.051 13.3 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF75591 - 0.13 12.8 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF75591 - 0.17 11.2 0.2 1 8.7 0.1 1.9 2 0 0 2 2 2 0 KaiC Tub_N PF16322.5 ORF75591 - 0.2 12.0 0.6 0.34 11.3 0.6 1.3 1 0 0 1 1 1 0 Tubby N-terminal FAD_binding_3 PF01494.19 ORF73424 - 8.7e-15 54.8 0.1 1.1e-14 54.4 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF73424 - 0.0037 16.4 0.0 0.019 14.0 0.0 1.9 2 0 0 2 2 2 1 Squalene epoxidase zf-C2H2_2 PF12756.7 ORF68548 - 0.59 10.5 8.1 4.5 7.7 2.2 2.9 2 1 1 3 3 3 0 C2H2 type zinc-finger (2 copies) Fer4_13 PF13370.6 ORF68548 - 1.3 9.6 6.5 5.1 7.7 0.2 3.3 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I zf-met PF12874.7 ORF68548 - 1.6 9.3 8.3 0.47 10.9 0.4 3.3 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF68548 - 6.1 6.7 7.2 7.6 6.4 0.1 3.3 3 0 0 3 3 3 0 zinc-finger C2H2-type C2 PF00168.30 ORF66703 - 2e-06 28.0 0.0 0.00017 21.9 0.0 2.6 2 0 0 2 2 2 1 C2 domain Neuraminidase PF18413.1 ORF66703 - 0.2 11.3 3.1 0.33 10.6 3.1 1.3 1 0 0 1 1 1 0 Neuraminidase-like domain C2 PF00168.30 ORF64792 - 2e-06 28.0 0.0 0.00017 21.9 0.0 2.6 2 0 0 2 2 2 1 C2 domain Neuraminidase PF18413.1 ORF64792 - 0.2 11.3 3.1 0.33 10.6 3.1 1.3 1 0 0 1 1 1 0 Neuraminidase-like domain R3H PF01424.22 ORF60788 - 2.7e-18 65.7 0.0 6.7e-07 29.2 0.0 3.5 3 0 0 3 3 3 3 R3H domain ATP-synt_Eps PF04627.13 ORF57986 - 0.14 12.2 0.0 0.3 11.1 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial ATP synthase epsilon chain TonB_dep_Rec PF00593.24 ORF5698 - 2.1e-59 202.6 21.5 2.6e-59 202.4 21.5 1.0 1 0 0 1 1 1 1 TonB dependent receptor DUF560 PF04575.13 ORF5698 - 0.022 14.2 0.6 2.9 7.3 0.2 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF560) OMP_b-brl PF13505.6 ORF5698 - 1.9 8.6 15.7 1.5 8.9 11.4 2.6 1 1 1 2 2 2 0 Outer membrane protein beta-barrel domain TMEM154 PF15102.6 ORF56823 - 0.0032 17.4 0.3 0.0032 17.4 0.3 2.3 3 0 0 3 3 3 1 TMEM154 protein family Amnionless PF14828.6 ORF56823 - 0.0054 15.6 0.1 0.007 15.2 0.1 1.2 1 0 0 1 1 1 1 Amnionless RIFIN PF02009.16 ORF56823 - 0.0069 16.3 1.7 0.013 15.4 1.7 1.5 1 1 0 1 1 1 1 Rifin RIC3 PF15361.6 ORF56823 - 0.017 15.5 0.0 0.026 14.9 0.0 1.3 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 Glycophorin_A PF01102.18 ORF56823 - 0.034 14.4 0.3 0.034 14.4 0.3 2.0 2 1 0 2 2 2 0 Glycophorin A DUF4064 PF13273.6 ORF56823 - 0.048 13.9 0.4 0.13 12.6 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Orf78 PF06024.12 ORF56823 - 0.065 13.5 1.7 0.1 12.9 0.1 2.1 2 1 0 2 2 2 0 Orf78 (ac78) DUF485 PF04341.12 ORF56823 - 0.096 12.6 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF2407_C PF13373.6 ORF56823 - 0.13 12.4 0.4 0.32 11.2 0.0 1.8 1 1 1 2 2 2 0 DUF2407 C-terminal domain Podoplanin PF05808.11 ORF56823 - 1 9.4 11.9 0.022 14.9 3.7 2.2 3 0 0 3 3 3 0 Podoplanin RCC1_2 PF13540.6 ORF51400 - 3.5e-10 39.4 10.0 0.26 11.1 0.0 6.5 6 0 0 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF51400 - 0.0033 17.5 9.3 4.6 7.3 0.6 5.3 5 1 0 5 5 5 1 Uncharacterised ACR, YagE family COG1723 MPP6 PF10175.9 ORF51400 - 0.034 14.7 0.3 0.059 13.9 0.3 1.3 1 0 0 1 1 1 0 M-phase phosphoprotein 6 XRCC1_N PF01834.16 ORF51400 - 0.13 12.2 0.5 57 3.7 0.0 3.7 1 1 4 5 5 5 0 XRCC1 N terminal domain Adhes-Ig_like PF09085.10 ORF51400 - 0.18 11.9 2.4 0.59 10.3 1.4 2.5 3 1 1 4 4 4 0 Adhesion molecule, immunoglobulin-like Radial_spoke PF04712.12 ORF51400 - 0.52 9.2 9.8 0.8 8.6 9.8 1.2 1 0 0 1 1 1 0 Radial spokehead-like protein RNA_pol_3_Rpc31 PF11705.8 ORF51400 - 0.7 10.1 5.9 1.1 9.4 5.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DUF4746 PF15928.5 ORF51400 - 6 6.2 8.3 4.2 6.7 6.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4746) C2 PF00168.30 ORF51004 - 2e-06 28.0 0.0 0.00017 21.9 0.0 2.6 2 0 0 2 2 2 1 C2 domain Neuraminidase PF18413.1 ORF51004 - 0.2 11.3 3.1 0.33 10.6 3.1 1.3 1 0 0 1 1 1 0 Neuraminidase-like domain ERM PF00769.19 ORF50672 - 0.48 10.2 38.5 0.13 12.1 21.7 2.2 1 1 1 2 2 2 0 Ezrin/radixin/moesin family EspB_PE PF18625.1 ORF50672 - 0.51 10.8 11.7 11 6.5 1.4 3.9 3 1 0 3 3 3 0 ESX-1 secreted protein B PE domain CENP-F_leu_zip PF10473.9 ORF50672 - 1.2 9.1 33.6 7.8 6.5 12.7 3.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HAP1_N PF04849.13 ORF50672 - 1.7 7.8 33.3 0.01 15.0 20.0 2.1 1 1 1 2 2 2 0 HAP1 N-terminal conserved region TPR_MLP1_2 PF07926.12 ORF50672 - 1.9 8.6 36.9 0.21 11.6 13.3 3.2 1 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein ATG16 PF08614.11 ORF50672 - 9.4 6.4 41.9 0.063 13.5 22.4 2.4 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) SNX17_FERM_C PF18116.1 ORF50255 - 0.086 12.9 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Sorting Nexin 17 FERM C-terminal domain PMT_4TMC PF16192.5 ORF50255 - 0.12 11.9 8.2 1 8.9 7.5 2.4 1 1 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase Oxidored_q2 PF00420.24 ORF50255 - 0.16 11.6 10.2 0.071 12.7 3.0 2.6 2 1 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF1673 PF07895.11 ORF50255 - 0.48 10.1 3.6 0.22 11.2 0.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1673) zf-TRAF PF02176.18 ORF48697 - 3.2e-06 27.7 20.2 0.00083 20.0 7.0 2.7 1 1 1 2 2 2 2 TRAF-type zinc finger zf-CCHC PF00098.23 ORF48697 - 5.5 7.2 15.8 1.9 8.7 0.1 4.4 4 0 0 4 4 4 0 Zinc knuckle Ammonium_transp PF00909.21 ORF47926 - 1.4e-82 277.6 20.9 1.5e-82 277.4 20.9 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Ank_3 PF13606.6 ORF4775 - 0.014 15.9 0.1 0.058 14.0 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeat Ank_2 PF12796.7 ORF4775 - 0.025 15.1 0.0 0.074 13.7 0.0 1.8 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) rRNA_proc-arch PF13234.6 ORF4775 - 0.059 13.3 0.0 0.087 12.7 0.0 1.6 1 1 0 1 1 1 0 rRNA-processing arch domain putAbiC PF16872.5 ORF4775 - 1.7 9.4 6.3 2.1 9.1 2.2 3.1 3 1 0 3 3 3 0 Putative phage abortive infection protein DUF1298 PF06974.13 ORF46314 - 1.3e-15 57.6 0.0 2.4e-15 56.7 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Peptidase_C34 PF05413.11 ORF46314 - 0.13 12.5 0.2 0.3 11.4 0.2 1.5 1 0 0 1 1 1 0 Putative closterovirus papain-like endopeptidase WES_acyltransf PF03007.16 ORF46314 - 0.21 11.3 0.1 0.47 10.2 0.0 1.5 2 0 0 2 2 2 0 Wax ester synthase-like Acyl-CoA acyltransferase domain NPL PF17800.1 ORF46080 - 4.5e-07 30.4 0.0 4.5e-07 30.4 0.0 3.1 2 1 0 2 2 2 1 Nucleoplasmin-like domain tRNA-synt_1b PF00579.25 ORF43208 - 3.8e-90 302.2 0.0 4.6e-90 301.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Ank_3 PF13606.6 ORF41156 - 0.014 15.9 0.1 0.058 14.0 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeat Ank_2 PF12796.7 ORF41156 - 0.025 15.1 0.0 0.074 13.7 0.0 1.8 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) rRNA_proc-arch PF13234.6 ORF41156 - 0.059 13.3 0.0 0.087 12.7 0.0 1.6 1 1 0 1 1 1 0 rRNA-processing arch domain putAbiC PF16872.5 ORF41156 - 1.7 9.4 6.3 2.1 9.1 2.2 3.1 3 1 0 3 3 3 0 Putative phage abortive infection protein Connexin PF00029.19 ORF4020 - 0.29 10.9 4.6 0.13 12.0 1.2 2.1 2 0 0 2 2 2 0 Connexin DUF805 PF05656.14 ORF38129 - 8.4 6.9 11.3 6.1 7.3 0.4 3.2 2 2 1 3 3 3 0 Protein of unknown function (DUF805) C2 PF00168.30 ORF37168 - 2e-06 28.0 0.0 0.00017 21.9 0.0 2.6 2 0 0 2 2 2 1 C2 domain Neuraminidase PF18413.1 ORF37168 - 0.2 11.3 3.1 0.33 10.6 3.1 1.3 1 0 0 1 1 1 0 Neuraminidase-like domain TMEM154 PF15102.6 ORF36884 - 0.0032 17.4 0.3 0.0032 17.4 0.3 2.3 3 0 0 3 3 3 1 TMEM154 protein family Amnionless PF14828.6 ORF36884 - 0.0054 15.6 0.1 0.007 15.2 0.1 1.2 1 0 0 1 1 1 1 Amnionless RIFIN PF02009.16 ORF36884 - 0.0069 16.3 1.7 0.013 15.4 1.7 1.5 1 1 0 1 1 1 1 Rifin RIC3 PF15361.6 ORF36884 - 0.017 15.5 0.0 0.026 14.9 0.0 1.3 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 Glycophorin_A PF01102.18 ORF36884 - 0.034 14.4 0.3 0.034 14.4 0.3 2.0 2 1 0 2 2 2 0 Glycophorin A DUF4064 PF13273.6 ORF36884 - 0.048 13.9 0.4 0.13 12.6 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Orf78 PF06024.12 ORF36884 - 0.065 13.5 1.7 0.1 12.9 0.1 2.1 2 1 0 2 2 2 0 Orf78 (ac78) DUF485 PF04341.12 ORF36884 - 0.096 12.6 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF2407_C PF13373.6 ORF36884 - 0.13 12.4 0.4 0.32 11.2 0.0 1.8 1 1 1 2 2 2 0 DUF2407 C-terminal domain Podoplanin PF05808.11 ORF36884 - 1 9.4 11.9 0.022 14.9 3.7 2.2 3 0 0 3 3 3 0 Podoplanin EMC3_TMCO1 PF01956.16 ORF35867 - 0.25 11.1 0.0 0.25 11.1 0.0 1.7 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like SET PF00856.28 ORF35537 - 1.1e-05 25.9 0.0 2.6e-05 24.7 0.0 1.6 2 0 0 2 2 2 1 SET domain Actin PF00022.19 ORF33314 - 1.8e-116 389.1 0.0 2.1e-115 385.6 0.0 1.9 1 1 0 1 1 1 1 Actin OTCace PF00185.24 ORF3108 - 5.5e-55 185.7 0.1 1.3e-54 184.6 0.1 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 ORF3108 - 7.3e-49 165.6 0.0 1.1e-48 165.0 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMP-binding PF00501.28 ORF27663 - 9.6e-11 40.9 0.0 1.4e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme DUF4131 PF13567.6 ORF25717 - 7.3 6.2 7.3 15 5.2 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) Sulfate_transp PF00916.20 ORF21915 - 9.2e-33 113.5 5.6 1.2e-32 113.1 5.6 1.1 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 ORF21915 - 9.1e-13 47.9 0.0 2e-12 46.8 0.0 1.5 2 0 0 2 2 2 1 STAS domain MFS_MOT1 PF16983.5 ORF21915 - 0.67 10.4 11.5 0.82 10.1 5.2 2.5 1 1 1 2 2 2 0 Molybdate transporter of MFS superfamily RecG_N PF17190.4 ORF2049 - 1.3 9.8 5.4 0.91 10.3 0.1 3.2 2 2 1 3 3 3 0 RecG N-terminal helical domain Rep_fac-A_C PF08646.10 ORF1767 - 1.2 8.9 3.9 2.3 7.9 3.9 1.4 1 0 0 1 1 1 0 Replication factor-A C terminal domain Metallophos PF00149.28 ORF12905 - 4.1e-05 24.2 1.0 7e-05 23.4 1.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PAN_2 PF08276.11 ORF12905 - 0.017 15.2 3.0 0.021 14.9 1.3 2.0 2 0 0 2 2 2 0 PAN-like domain DEAD PF00270.29 ORF109547 - 6e-05 22.9 0.0 8.5e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase CMS1 PF14617.6 ORF109547 - 0.032 13.6 0.0 0.047 13.0 0.0 1.2 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit Semialdhyde_dh PF01118.24 ORF106538 - 1.8e-32 112.3 0.0 3.1e-32 111.6 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 ORF106538 - 3.9e-20 72.7 0.0 5.9e-20 72.1 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain DapB_N PF01113.20 ORF106538 - 0.0022 18.1 0.0 0.0043 17.2 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 ORF106538 - 0.013 16.3 0.0 0.032 15.1 0.0 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Epimerase PF01370.21 ORF106538 - 0.019 14.5 0.0 0.029 13.8 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family NmrA PF05368.13 ORF106538 - 0.043 13.4 0.0 0.067 12.7 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family DUF4459 PF14673.6 ORF106538 - 0.16 11.8 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4459) Band_7 PF01145.25 ORF104944 - 1.8e-34 119.3 0.7 2.5e-34 118.8 0.7 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family CCP_MauG PF03150.14 ORF104944 - 0.29 11.8 1.6 1.2 9.8 1.6 2.0 2 1 0 2 2 2 0 Di-haem cytochrome c peroxidase HECT PF00632.25 ORF103852 - 1.2e-47 162.9 0.0 1.7e-47 162.4 0.0 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) DUF2623 PF11115.8 ORF103852 - 0.012 15.7 0.2 0.028 14.5 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2623) Ank_2 PF12796.7 ORF102361 - 7.1e-55 183.5 7.9 4e-17 62.6 0.0 4.7 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF102361 - 4.1e-40 135.7 6.3 3.8e-10 40.1 0.0 6.4 4 2 4 8 8 8 8 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF102361 - 9.9e-33 111.8 16.1 1.9e-07 31.2 0.1 8.7 1 1 8 9 9 9 9 Ankyrin repeats (many copies) Ank PF00023.30 ORF102361 - 5.5e-31 105.7 22.3 1.2e-05 25.5 0.0 9.1 9 0 0 9 9 9 9 Ankyrin repeat Ank_3 PF13606.6 ORF102361 - 2.1e-30 101.4 10.0 3.1e-05 24.0 0.0 9.3 9 0 0 9 9 9 8 Ankyrin repeat IncF PF17626.2 NODE_19535_length_997_cov_3.992723_g14945_i0reverse_frame_1 - 0.17 12.2 1.8 0.39 11.1 1.8 1.6 1 0 0 1 1 1 0 Inclusion membrane protein F adh_short PF00106.25 NODE_19501_length_997_cov_1731.865904_g14918_i0reverse_frame_1 - 1.6e-27 96.3 0.0 2e-27 95.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_19501_length_997_cov_1731.865904_g14918_i0reverse_frame_1 - 5.4e-15 55.6 0.0 7.2e-15 55.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 NODE_19501_length_997_cov_1731.865904_g14918_i0reverse_frame_1 - 3.5e-05 23.8 0.0 5.3e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 NODE_19501_length_997_cov_1731.865904_g14918_i0reverse_frame_1 - 0.016 15.1 0.0 0.027 14.4 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Epimerase PF01370.21 NODE_19501_length_997_cov_1731.865904_g14918_i0reverse_frame_1 - 0.14 11.6 0.0 0.27 10.6 0.0 1.5 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family MTS PF05175.14 NODE_19501_length_997_cov_1731.865904_g14918_i0reverse_frame_1 - 0.16 11.5 0.0 0.43 10.1 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase small domain S-AdoMet_synt_C PF02773.16 NODE_19407_length_1001_cov_3.144928_g14840_i0reverse_frame_2 - 2.7e-65 218.5 0.2 5.2e-65 217.6 0.0 1.6 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 NODE_19407_length_1001_cov_3.144928_g14840_i0reverse_frame_2 - 7.4e-47 158.5 0.0 1.3e-46 157.7 0.0 1.4 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 NODE_19407_length_1001_cov_3.144928_g14840_i0reverse_frame_2 - 1.2e-22 80.5 0.0 2.4e-22 79.5 0.0 1.6 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain IL5 PF02025.15 NODE_19405_length_1001_cov_52.771222_g14838_i0forward_frame_3 - 0.0096 16.2 1.7 0.026 14.8 0.2 2.3 3 0 0 3 3 3 1 Interleukin 5 PUF PF00806.19 NODE_19405_length_1001_cov_52.771222_g14838_i0forward_frame_2 - 0.00032 20.2 0.1 0.00093 18.8 0.1 1.8 1 0 0 1 1 1 1 Pumilio-family RNA binding repeat EIF_2_alpha PF07541.12 NODE_19376_length_1002_cov_2.339193_g14812_i0reverse_frame_3 - 0.066 13.3 4.1 0.14 12.2 4.1 1.7 1 1 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit EF-hand_6 PF13405.6 NODE_19376_length_1002_cov_2.339193_g14812_i0reverse_frame_3 - 0.076 13.0 0.3 2.9 8.1 0.0 3.1 2 0 0 2 2 2 0 EF-hand domain SAM_Exu PF18609.1 NODE_19376_length_1002_cov_2.339193_g14812_i0reverse_frame_3 - 0.077 13.1 0.3 0.38 10.9 0.0 2.3 2 0 0 2 2 2 0 Exuperantia SAM-like domain HATPase_c PF02518.26 NODE_19375_length_1002_cov_4.132368_g14811_i0reverse_frame_2 - 1.3e-15 57.8 0.0 2.4e-15 57.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 NODE_19375_length_1002_cov_4.132368_g14811_i0reverse_frame_2 - 7.1e-09 35.6 0.5 7.1e-09 35.6 0.5 2.6 4 0 0 4 4 4 1 His Kinase A (phospho-acceptor) domain PepSY_TM PF03929.16 NODE_19375_length_1002_cov_4.132368_g14811_i0reverse_frame_2 - 0.0067 16.1 0.0 0.01 15.5 0.0 1.3 1 1 0 1 1 1 1 PepSY-associated TM region HEPN_DZIP3 PF18738.1 NODE_19375_length_1002_cov_4.132368_g14811_i0reverse_frame_2 - 0.032 14.0 0.1 0.058 13.1 0.1 1.4 1 0 0 1 1 1 0 DZIP3/ hRUL138-like HEPN HATPase_c_5 PF14501.6 NODE_19375_length_1002_cov_4.132368_g14811_i0reverse_frame_2 - 0.093 12.7 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 GHKL domain BLOC1_2 PF10046.9 NODE_19375_length_1002_cov_4.132368_g14811_i0reverse_frame_2 - 0.099 13.0 0.1 8.5 6.7 0.0 2.7 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HAMP PF00672.25 NODE_19375_length_1002_cov_4.132368_g14811_i0reverse_frame_2 - 0.2 12.1 3.4 0.9 10.0 0.7 3.4 3 2 0 3 3 3 0 HAMP domain zf-C3HC4_2 PF13923.6 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 7.3e-09 35.3 7.9 1.4e-08 34.5 7.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 1.5e-06 28.0 8.8 3.3e-06 26.9 8.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 2.8e-06 27.1 1.8 5.5e-06 26.2 1.8 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-Nse PF11789.8 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 2.6e-05 23.9 6.8 5.9e-05 22.8 6.8 1.5 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_2 PF13639.6 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 4.2e-05 23.8 7.2 7.7e-05 23.0 7.2 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.00014 21.6 6.1 0.00024 20.9 6.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.00015 21.7 6.8 0.00037 20.5 6.8 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.00062 19.9 7.6 0.00062 19.9 7.6 1.7 2 0 0 2 2 1 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.00091 19.1 6.8 0.0017 18.3 6.8 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_4 PF14570.6 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.0022 17.8 2.7 0.0041 16.9 2.7 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-rbx1 PF12678.7 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.0024 18.1 4.1 0.0057 16.9 4.1 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain U-box PF04564.15 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.033 14.3 0.2 0.38 11.0 0.0 2.6 2 0 0 2 2 2 0 U-box domain Prok-RING_4 PF14447.6 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.046 13.6 5.0 0.084 12.7 5.0 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_10 PF16685.5 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.18 12.0 4.0 0.46 10.7 4.0 1.7 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-MIZ PF02891.20 NODE_19374_length_1002_cov_6.258532_g14810_i0reverse_frame_3 - 0.7 9.7 5.9 1.4 8.7 5.9 1.5 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger Aminotran_1_2 PF00155.21 ORF98226 - 4.2e-36 124.9 0.0 5e-36 124.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF98226 - 0.00011 21.3 0.0 0.00029 19.9 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF98226 - 0.0035 15.9 0.0 0.005 15.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Alpha-mann_mid PF09261.11 ORF97009 - 1.8e-08 34.4 0.1 4.2e-08 33.2 0.1 1.7 1 1 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 ORF97009 - 0.0006 19.3 0.1 0.0015 18.0 0.0 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain DUF4363 PF14276.6 ORF97009 - 0.0099 16.0 0.8 0.029 14.5 0.8 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) Mhr1 PF12829.7 ORF97009 - 0.049 13.7 0.2 0.17 12.0 0.1 2.0 2 0 0 2 2 2 0 Transcriptional regulation of mitochondrial recombination Diphtheria_C PF02763.14 ORF97009 - 0.1 12.2 1.5 7 6.3 0.0 2.3 2 0 0 2 2 2 0 Diphtheria toxin, C domain DnaJ PF00226.31 ORF87368 - 4.8e-14 52.2 0.0 1.2e-13 51.0 0.0 1.7 1 1 0 1 1 1 1 DnaJ domain VASt PF16016.5 ORF84178 - 7.4e-13 49.2 0.0 1.2e-12 48.5 0.0 1.3 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain WD40 PF00400.32 ORF82594 - 0.00014 22.6 5.6 0.062 14.2 0.1 4.8 5 1 0 5 5 5 2 WD domain, G-beta repeat Alpha-mann_mid PF09261.11 ORF80045 - 1.8e-08 34.4 0.1 4.2e-08 33.2 0.1 1.7 1 1 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 ORF80045 - 0.0006 19.3 0.1 0.0015 18.0 0.0 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain DUF4363 PF14276.6 ORF80045 - 0.0099 16.0 0.8 0.029 14.5 0.8 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) Mhr1 PF12829.7 ORF80045 - 0.049 13.7 0.2 0.17 12.0 0.1 2.0 2 0 0 2 2 2 0 Transcriptional regulation of mitochondrial recombination Diphtheria_C PF02763.14 ORF80045 - 0.1 12.2 1.5 7 6.3 0.0 2.3 2 0 0 2 2 2 0 Diphtheria toxin, C domain TauE PF01925.19 ORF7925 - 0.0023 17.6 0.9 0.0066 16.1 0.1 1.9 2 0 0 2 2 2 1 Sulfite exporter TauE/SafE PAM2 PF07145.15 ORF7925 - 0.14 11.9 0.0 0.35 10.6 0.0 1.6 1 0 0 1 1 1 0 Ataxin-2 C-terminal region SpoIIM PF01944.17 ORF7925 - 3.6 7.6 8.0 0.16 12.0 1.4 2.0 2 0 0 2 2 2 0 Stage II sporulation protein M GP3 PF03076.14 ORF75270 - 0.09 12.8 3.5 0.15 12.1 3.5 1.3 1 0 0 1 1 1 0 Equine arteritis virus GP3 MFS_1 PF07690.16 ORF72703 - 1.4e-06 27.5 12.5 1.4e-06 27.5 12.5 1.5 1 1 1 2 2 2 2 Major Facilitator Superfamily Cullin PF00888.22 ORF71556 - 0.0037 16.0 0.0 0.0047 15.6 0.0 1.1 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF71556 - 0.069 13.2 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Cullin protein neddylation domain KH_1 PF00013.29 ORF66022 - 2.3e-14 52.9 0.0 6.7e-05 22.6 0.0 3.9 4 0 0 4 4 4 3 KH domain KH_2 PF07650.17 ORF66022 - 0.058 13.2 0.0 15 5.4 0.0 2.7 2 0 0 2 2 2 0 KH domain KH_4 PF13083.6 ORF66022 - 0.092 12.6 0.0 20 5.1 0.0 3.1 3 0 0 3 3 3 0 KH domain DUF2189 PF09955.9 ORF62623 - 0.22 11.8 0.7 0.38 11.0 0.7 1.3 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2189) LAP1C PF05609.12 ORF62623 - 0.29 10.2 14.5 0.36 9.9 14.5 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) GREB1 PF15782.5 ORF62623 - 2 5.4 18.0 2.2 5.3 18.0 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Hamartin PF04388.12 ORF62623 - 2.9 6.4 14.7 3.5 6.2 14.7 1.1 1 0 0 1 1 1 0 Hamartin protein Macoilin PF09726.9 ORF62623 - 4 5.9 17.7 5.6 5.4 17.7 1.2 1 0 0 1 1 1 0 Macoilin family eIF-3_zeta PF05091.12 ORF62623 - 5.4 5.9 16.4 7.6 5.4 16.4 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) p450 PF00067.22 ORF61680 - 6.7e-41 140.5 1.0 7.7e-41 140.3 1.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 RNA_pol_L_2 PF13656.6 ORF61680 - 0.079 12.7 0.0 1.4 8.8 0.0 2.3 2 0 0 2 2 2 0 RNA polymerase Rpb3/Rpb11 dimerisation domain Patatin PF01734.22 ORF54778 - 3.1e-13 50.4 0.0 4.8e-13 49.8 0.0 1.3 1 0 0 1 1 1 1 Patatin-like phospholipase SapB_2 PF03489.17 ORF54778 - 0.12 12.5 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 Saposin-like type B, region 2 NAD_binding_10 PF13460.6 ORF48313 - 1.3e-23 83.9 0.0 2e-23 83.2 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 ORF48313 - 8.6e-09 34.8 0.0 1.2e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NmrA PF05368.13 ORF48313 - 1.8e-07 31.0 0.0 1.9e-06 27.6 0.0 2.4 1 1 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 ORF48313 - 5.7e-05 22.7 0.1 0.00021 20.8 0.1 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 ORF48313 - 0.0064 15.7 0.0 0.012 14.7 0.0 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF48313 - 0.029 13.5 0.2 2.5 7.2 0.0 2.3 1 1 0 2 2 2 0 Male sterility protein PQQ_2 PF13360.6 ORF4718 - 1.2e-12 47.9 0.3 0.00018 21.1 0.0 3.5 2 2 1 3 3 3 3 PQQ-like domain PQQ PF01011.21 ORF4718 - 1.3e-09 37.5 0.8 0.0021 17.9 0.0 5.3 6 0 0 6 6 6 2 PQQ enzyme repeat PQQ_3 PF13570.6 ORF4718 - 4.1e-07 30.3 7.5 0.15 12.6 0.2 5.6 7 0 0 7 7 7 3 PQQ-like domain EF-hand_5 PF13202.6 ORF4718 - 0.0059 16.0 1.7 0.0061 16.0 0.2 1.9 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF4718 - 0.014 14.9 0.0 0.029 13.9 0.0 1.6 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF4718 - 0.12 12.4 0.0 0.28 11.2 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain DUF2012 PF09430.10 ORF4718 - 0.18 11.9 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2012) Ribosomal_S5 PF00333.20 ORF45397 - 2.9e-24 84.8 2.1 5.7e-24 83.9 2.1 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 ORF45397 - 1.1e-22 79.3 0.0 1.7e-22 78.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain dUTPase PF00692.19 ORF45397 - 0.13 11.9 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 dUTPase Abhydrolase_1 PF00561.20 ORF45089 - 2.3e-10 40.6 0.1 4.7e-06 26.4 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF45089 - 4.5e-09 35.9 0.1 1.4e-05 24.5 0.1 2.2 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF45089 - 1.8e-06 27.6 0.0 0.0085 15.6 0.0 2.2 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF45089 - 0.0049 17.5 3.0 0.017 15.8 3.0 1.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 ORF45089 - 0.18 11.3 0.0 0.52 9.8 0.0 1.7 1 1 0 1 1 1 0 Dienelactone hydrolase family Abhydrolase_2 PF02230.16 ORF45089 - 0.2 11.4 0.1 3.2 7.5 0.0 2.3 1 1 0 2 2 2 0 Phospholipase/Carboxylesterase Alpha-mann_mid PF09261.11 ORF43576 - 1.8e-08 34.4 0.1 4.2e-08 33.2 0.1 1.7 1 1 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 ORF43576 - 0.0006 19.3 0.1 0.0015 18.0 0.0 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain DUF4363 PF14276.6 ORF43576 - 0.0099 16.0 0.8 0.029 14.5 0.8 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) Mhr1 PF12829.7 ORF43576 - 0.049 13.7 0.2 0.17 12.0 0.1 2.0 2 0 0 2 2 2 0 Transcriptional regulation of mitochondrial recombination Diphtheria_C PF02763.14 ORF43576 - 0.1 12.2 1.5 7 6.3 0.0 2.3 2 0 0 2 2 2 0 Diphtheria toxin, C domain MMS19_N PF14500.6 ORF38017 - 0.019 14.5 0.4 0.036 13.6 0.4 1.4 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Xpo1 PF08389.12 ORF38017 - 0.068 13.2 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Exportin 1-like protein DUF4441 PF14536.6 ORF38017 - 1.5 9.0 16.1 4.6 7.5 3.7 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4441) DUF4460 PF14687.6 ORF38017 - 8 6.6 8.8 0.63 10.1 1.4 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4460) zf-C3HC4_3 PF13920.6 ORF35256 - 4.5e-13 48.8 9.5 4.5e-13 48.8 9.5 2.7 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF35256 - 6.1e-08 32.4 9.5 6.1e-08 32.4 9.5 2.6 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF35256 - 2.1e-05 24.7 9.9 2.1e-05 24.7 9.9 2.8 3 0 0 3 3 3 1 Ring finger domain zf-RING_5 PF14634.6 ORF35256 - 0.0015 18.5 9.8 0.0015 18.5 9.8 2.8 2 1 1 3 3 3 1 zinc-RING finger domain CCDC53 PF10152.9 ORF35256 - 0.099 13.1 1.2 0.14 12.5 1.2 1.2 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex ApoM PF11032.8 ORF35256 - 0.12 12.1 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 ApoM domain zf-RING_UBOX PF13445.6 ORF35256 - 0.57 10.3 16.2 1.4 9.1 4.8 2.9 2 1 0 2 2 2 0 RING-type zinc-finger TPR_1 PF00515.28 ORF31336 - 3.4e-06 26.6 0.4 0.072 12.9 0.1 3.0 2 0 0 2 2 2 2 Tetratricopeptide repeat Cyt-b5 PF00173.28 ORF31336 - 0.00015 21.8 0.1 0.00037 20.6 0.1 1.7 1 1 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain TPR_2 PF07719.17 ORF31336 - 0.00015 21.6 2.6 0.032 14.3 0.0 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF31336 - 0.0032 17.1 0.8 0.015 15.0 0.8 2.2 1 0 0 1 1 1 1 TPR repeat TPR_17 PF13431.6 ORF31336 - 0.015 15.6 0.9 0.11 13.0 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF31336 - 0.032 14.9 0.2 0.14 12.9 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF31336 - 0.043 14.0 3.4 3.4 8.1 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat BTB PF00651.31 ORF2706 - 2.1e-10 40.8 0.1 4.8e-10 39.7 0.1 1.6 2 0 0 2 2 2 1 BTB/POZ domain Beta_elim_lyase PF01212.21 ORF24922 - 3.1e-96 322.1 0.3 4.2e-96 321.7 0.1 1.3 2 0 0 2 2 2 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 ORF24922 - 1.2e-08 34.6 0.0 2e-08 33.8 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 ORF24922 - 0.00028 19.5 0.0 0.00057 18.5 0.0 1.5 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 ORF24922 - 0.022 14.1 0.4 0.3 10.3 0.0 2.1 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family CheD PF03975.13 ORF24922 - 0.11 12.6 0.3 0.3 11.2 0.2 1.8 1 1 0 1 1 1 0 CheD chemotactic sensory transduction MMS19_N PF14500.6 ORF24819 - 0.019 14.5 0.4 0.036 13.6 0.4 1.4 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Xpo1 PF08389.12 ORF24819 - 0.068 13.2 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Exportin 1-like protein DUF4441 PF14536.6 ORF24819 - 1.5 9.0 16.1 4.6 7.5 3.7 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4441) DUF4460 PF14687.6 ORF24819 - 8 6.6 8.8 0.63 10.1 1.4 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4460) Thioesterase PF00975.20 ORF15099 - 0.033 14.3 0.3 0.087 12.9 0.3 1.6 1 0 0 1 1 1 0 Thioesterase domain PGAP1 PF07819.13 ORF15099 - 0.16 11.7 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein FAD_binding_1 PF00667.20 ORF14605 - 1.5e-16 60.7 0.0 2.3e-16 60.0 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain NAD_binding_1 PF00175.21 ORF14605 - 2.7e-15 56.9 0.0 4.8e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain CRAL_TRIO PF00650.20 ORF13192 - 2.2e-12 47.0 0.0 3.2e-12 46.4 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain MMS19_N PF14500.6 ORF111458 - 0.019 14.5 0.4 0.036 13.6 0.4 1.4 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Xpo1 PF08389.12 ORF111458 - 0.068 13.2 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Exportin 1-like protein DUF4441 PF14536.6 ORF111458 - 1.5 9.0 16.1 4.6 7.5 3.7 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4441) DUF4460 PF14687.6 ORF111458 - 8 6.6 8.8 0.63 10.1 1.4 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4460) 5_nucleotid_C PF02872.18 ORF10999 - 1.3e-27 97.0 0.0 2e-27 96.4 0.0 1.3 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain CDC45 PF02724.14 ORF10999 - 0.13 10.5 0.0 0.2 9.9 0.0 1.3 1 0 0 1 1 1 0 CDC45-like protein Alpha-mann_mid PF09261.11 ORF10407 - 1.8e-08 34.4 0.1 4.2e-08 33.2 0.1 1.7 1 1 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 ORF10407 - 0.0006 19.3 0.1 0.0015 18.0 0.0 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain DUF4363 PF14276.6 ORF10407 - 0.0099 16.0 0.8 0.029 14.5 0.8 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) Mhr1 PF12829.7 ORF10407 - 0.049 13.7 0.2 0.17 12.0 0.1 2.0 2 0 0 2 2 2 0 Transcriptional regulation of mitochondrial recombination Diphtheria_C PF02763.14 ORF10407 - 0.1 12.2 1.5 7 6.3 0.0 2.3 2 0 0 2 2 2 0 Diphtheria toxin, C domain MMS19_N PF14500.6 ORF103986 - 0.019 14.5 0.4 0.036 13.6 0.4 1.4 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Xpo1 PF08389.12 ORF103986 - 0.068 13.2 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Exportin 1-like protein DUF4441 PF14536.6 ORF103986 - 1.5 9.0 16.1 4.6 7.5 3.7 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4441) DUF4460 PF14687.6 ORF103986 - 8 6.6 8.8 0.63 10.1 1.4 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4460) RCC1_2 PF13540.6 ORF103739 - 1.7e-17 62.7 13.4 0.027 14.3 0.0 8.3 8 0 0 8 8 8 7 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF103739 - 1.2e-06 28.4 2.4 0.11 12.4 0.0 4.7 1 1 4 5 5 5 2 Lipocalin / cytosolic fatty-acid binding protein family Capsule_synth PF05159.14 ORF103739 - 3 7.2 6.4 15 5.0 0.1 4.0 3 2 3 6 6 6 0 Capsule polysaccharide biosynthesis protein Aminotran_1_2 PF00155.21 ORF103580 - 4.2e-36 124.9 0.0 5e-36 124.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF103580 - 0.00011 21.3 0.0 0.00029 19.9 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF103580 - 0.0035 15.9 0.0 0.005 15.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Alpha-mann_mid PF09261.11 ORF103114 - 1.8e-08 34.4 0.1 4.2e-08 33.2 0.1 1.7 1 1 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 ORF103114 - 0.0006 19.3 0.1 0.0015 18.0 0.0 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain DUF4363 PF14276.6 ORF103114 - 0.0099 16.0 0.8 0.029 14.5 0.8 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) Mhr1 PF12829.7 ORF103114 - 0.049 13.7 0.2 0.17 12.0 0.1 2.0 2 0 0 2 2 2 0 Transcriptional regulation of mitochondrial recombination Diphtheria_C PF02763.14 ORF103114 - 0.1 12.2 1.5 7 6.3 0.0 2.3 2 0 0 2 2 2 0 Diphtheria toxin, C domain Holin_BhlA PF10960.8 NODE_19614_length_994_cov_92.521376_g15010_i0reverse_frame_1 - 0.043 13.8 0.3 0.043 13.8 0.3 2.5 3 0 0 3 3 3 0 BhlA holin family Jacalin PF01419.17 NODE_19601_length_994_cov_2998.524505_g11360_i5forward_frame_1 - 5.7e-15 55.4 3.0 5.2e-08 32.9 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain HTH_Mga PF08280.11 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_1 - 0.11 12.6 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Ribosomal_L6e PF01159.19 NODE_19564_length_996_cov_113.817898_g14969_i0reverse_frame_1 - 0.028 14.9 2.4 0.028 14.9 2.4 2.5 2 1 1 3 3 3 0 Ribosomal protein L6e DUF411 PF04214.13 NODE_19548_length_996_cov_295.150884_g14956_i0forward_frame_1 - 0.36 10.8 5.6 8 6.5 0.2 3.2 3 0 0 3 3 3 0 Protein of unknown function, DUF Peptidase_M17 PF00883.21 NODE_19535_length_997_cov_3.992723_g14945_i0reverse_frame_3 - 1.1e-92 310.7 1.4 1.4e-92 310.3 0.9 1.4 2 0 0 2 2 2 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 NODE_19535_length_997_cov_3.992723_g14945_i0reverse_frame_3 - 2e-08 34.1 0.6 5.9e-08 32.6 0.0 2.1 2 1 1 3 3 3 1 Cytosol aminopeptidase family, N-terminal domain Myb_DNA-bind_6 PF13921.6 NODE_19517_length_997_cov_192.566528_g14929_i1forward_frame_3 - 0.012 15.8 0.0 0.041 14.1 0.0 1.8 2 0 0 2 2 2 0 Myb-like DNA-binding domain PALB2_WD40 PF16756.5 NODE_19517_length_997_cov_192.566528_g14929_i1forward_frame_3 - 0.042 12.8 0.0 0.059 12.3 0.0 1.2 1 0 0 1 1 1 0 Partner and localizer of BRCA2 WD40 domain DUF1774 PF08611.10 NODE_19501_length_997_cov_1731.865904_g14918_i0reverse_frame_2 - 0.12 12.8 1.4 1.3 9.4 0.1 2.4 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF1774) ACR_tran PF00873.19 NODE_19470_length_999_cov_3.203320_g14889_i0forward_frame_2 - 7.6e-106 354.9 0.0 8.5e-106 354.8 0.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Whib PF02467.16 ORF99413 - 4.9 7.8 6.9 6.5 7.4 0.8 2.7 1 1 0 2 2 2 0 Transcription factor WhiB Thioredoxin_6 PF13848.6 ORF99348 - 3.1e-28 98.9 0.0 3.4e-23 82.5 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin-like domain Thioredoxin PF00085.20 ORF99348 - 6.1e-28 96.8 0.1 5.9e-26 90.5 0.0 2.5 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_7 PF13899.6 ORF99348 - 0.0014 18.8 0.0 0.025 14.7 0.0 2.6 2 1 0 2 2 2 1 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF99348 - 0.0023 18.3 0.6 0.064 13.7 0.2 3.0 3 1 0 3 3 3 1 Thioredoxin-like domain ERp29_N PF07912.13 ORF99348 - 0.074 13.2 0.0 0.26 11.4 0.0 2.0 1 0 0 1 1 1 0 ERp29, N-terminal domain UCH_1 PF13423.6 ORF99348 - 0.095 12.3 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Thioredoxin_8 PF13905.6 ORF99348 - 0.11 12.9 0.0 0.29 11.5 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin-like DUF1936 PF09151.10 ORF99348 - 0.16 11.9 0.2 2 8.4 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) zf-MIZ PF02891.20 ORF98596 - 1.6e-09 37.4 3.3 3.8e-09 36.1 3.3 1.7 1 1 0 1 1 1 1 MIZ/SP-RING zinc finger zf-Nse PF11789.8 ORF98596 - 5.7e-05 22.9 0.1 0.00011 22.0 0.1 1.5 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Ribosomal_L10 PF00466.20 ORF95795 - 6.9e-21 74.3 0.1 1.2e-20 73.4 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 ORF95795 - 2.9e-19 68.8 0.3 9.4e-19 67.2 0.2 1.9 2 0 0 2 2 2 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 ORF95795 - 0.0016 19.0 14.5 0.008 16.7 14.5 2.2 1 1 0 1 1 1 1 60s Acidic ribosomal protein CENP-T_C PF15511.6 ORF95795 - 0.12 12.5 0.3 0.26 11.4 0.3 1.5 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold FecCD PF01032.18 ORF94026 - 9.5e-86 287.6 28.6 1.1e-85 287.4 28.6 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 ORF94026 - 4e-07 29.8 11.8 4e-07 29.8 11.8 1.9 1 1 1 2 2 2 1 ABC 3 transport family HAD_2 PF13419.6 ORF93471 - 2.5e-17 63.6 0.0 3.7e-17 63.0 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF93471 - 4.8e-13 49.9 0.6 1.3e-12 48.5 0.6 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF93471 - 0.00036 20.5 0.3 0.0018 18.3 0.1 2.1 2 0 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 ORF93471 - 0.0035 17.8 0.1 0.013 15.9 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Ufm1 PF03671.14 ORF93471 - 0.081 13.0 0.1 0.18 11.9 0.1 1.5 1 0 0 1 1 1 0 Ubiquitin fold modifier 1 protein WWE PF02825.20 ORF88284 - 1.1e-12 48.4 0.6 3.5e-12 46.7 0.7 1.8 2 0 0 2 2 2 1 WWE domain WGR PF05406.15 ORF88284 - 0.064 13.3 0.1 0.064 13.3 0.1 3.0 3 0 0 3 3 3 0 WGR domain TAF4 PF05236.14 ORF88284 - 5.4 6.7 16.6 7.4 6.2 16.6 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family SBP_bac_5 PF00496.22 ORF87385 - 1.6e-30 106.4 2.9 2.2e-30 105.9 2.9 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle His_Phos_1 PF00300.22 ORF84076 - 0.0017 18.1 0.6 0.0034 17.1 0.0 1.7 2 0 0 2 2 2 1 Histidine phosphatase superfamily (branch 1) Methyltransf_23 PF13489.6 ORF83148 - 0.014 15.3 0.0 0.038 13.8 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Kinesin PF00225.23 ORF818 - 2.8e-62 210.6 0.5 6.2e-62 209.5 0.2 1.6 1 1 1 2 2 2 1 Kinesin motor domain DUF2666 PF10869.8 ORF818 - 0.14 12.3 1.2 0.43 10.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2666) BPD_transp_2 PF02653.16 ORF7988 - 4.3e-43 147.4 43.6 4.3e-43 147.4 43.6 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component CsgG PF03783.14 ORF78214 - 0.16 11.3 0.1 0.25 10.6 0.1 1.2 1 0 0 1 1 1 0 Curli production assembly/transport component CsgG Bestrophin PF01062.21 ORF73555 - 5.9e-10 39.0 0.3 8.6e-10 38.5 0.3 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Cyclin_C PF02984.19 ORF68690 - 0.054 13.6 0.7 0.18 11.9 0.7 1.9 1 0 0 1 1 1 0 Cyclin, C-terminal domain DnaJ PF00226.31 ORF6812 - 3.5e-22 78.3 0.3 7.4e-22 77.2 0.3 1.6 1 0 0 1 1 1 1 DnaJ domain DAGAT PF03982.13 ORF67032 - 1.1e-40 139.5 0.0 1.4e-40 139.1 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol acyltransferase zf-RING_2 PF13639.6 ORF64297 - 7.2e-06 26.2 8.1 4.2e-05 23.8 8.1 2.2 1 1 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF64297 - 7.7e-06 25.8 3.2 1.5e-05 24.9 3.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger EF-hand_6 PF13405.6 ORF64297 - 2.1e-05 24.1 0.0 0.28 11.2 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain zf-C3HC4_3 PF13920.6 ORF64297 - 5.3e-05 23.0 3.8 0.0015 18.3 2.1 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF64297 - 6.1e-05 22.8 2.8 0.00013 21.8 2.8 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) EF-hand_7 PF13499.6 ORF64297 - 0.00065 20.1 0.1 0.16 12.5 0.1 2.6 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF64297 - 0.0023 17.4 0.0 1.6 8.5 0.0 2.9 2 0 0 2 2 2 1 EF hand zf-RING_5 PF14634.6 ORF64297 - 0.0078 16.2 10.5 0.025 14.5 10.6 1.8 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF64297 - 0.011 15.9 11.1 0.016 15.3 6.3 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING HscB_4_cys PF18256.1 ORF64297 - 0.017 15.0 0.1 0.017 15.0 0.1 2.6 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif EF-hand_5 PF13202.6 ORF64297 - 0.023 14.2 0.3 0.055 13.0 0.0 1.8 2 0 0 2 2 2 0 EF hand zf-C3HC4_2 PF13923.6 ORF64297 - 0.034 14.0 9.6 1.6 8.6 6.9 2.7 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF64297 - 0.038 13.9 5.5 0.52 10.2 2.7 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Terminase_GpA PF05876.12 ORF64297 - 0.075 11.6 0.6 0.11 11.1 0.6 1.1 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) zf-MIZ PF02891.20 ORF64297 - 0.16 11.7 10.0 0.15 11.8 6.3 2.2 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger HypA PF01155.19 ORF64297 - 0.2 11.7 1.6 0.44 10.6 1.6 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RING_4 PF14570.6 ORF64297 - 0.2 11.5 4.2 0.63 9.9 1.6 2.3 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RING_11 PF17123.5 ORF64297 - 0.23 11.2 5.2 6.8 6.5 0.0 2.5 2 0 0 2 2 2 0 RING-like zinc finger CEBP_ZZ PF16366.5 ORF64297 - 0.43 10.8 5.5 8.4 6.7 1.1 2.6 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain PHD PF00628.29 ORF64297 - 2.3 8.2 7.2 0.57 10.1 3.9 1.8 2 0 0 2 2 1 0 PHD-finger DZR PF12773.7 ORF64297 - 6.5 6.9 8.7 39 4.4 8.8 2.1 1 1 1 2 2 2 0 Double zinc ribbon zf-rbx1 PF12678.7 ORF64297 - 8.5 6.8 8.4 20 5.5 8.0 1.9 1 1 1 2 2 2 0 RING-H2 zinc finger domain Ion_trans PF00520.31 ORF57173 - 2.2e-09 36.9 0.5 2.9e-09 36.5 0.5 1.2 1 0 0 1 1 1 1 Ion transport protein DUF3368 PF11848.8 ORF57173 - 0.024 14.4 0.2 0.36 10.7 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3368) Spc24 PF08286.11 ORF57173 - 0.088 13.1 6.4 0.24 11.7 0.7 2.3 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 UPF0449 PF15136.6 ORF57173 - 0.16 12.4 0.9 1.2 9.6 0.3 2.4 2 1 0 2 2 2 0 Uncharacterised protein family UPF0449 DUF2935 PF11155.8 ORF5176 - 0.16 12.3 3.6 6.3 7.1 0.9 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) ISG65-75 PF11727.8 ORF5176 - 0.22 10.7 4.3 0.8 8.9 0.4 2.1 1 1 1 2 2 2 0 Invariant surface glycoprotein Atg14 PF10186.9 ORF50379 - 0.051 12.7 5.8 0.073 12.1 5.8 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Phage_TAC_9 PF10876.8 ORF50379 - 0.086 12.9 0.0 0.21 11.7 0.0 1.7 1 0 0 1 1 1 0 Phage tail assemb.y chaperone protein, TAC RRM_1 PF00076.22 ORF47523 - 3.1e-28 97.4 0.2 5.4e-14 51.8 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 ORF47523 - 7.9e-10 38.7 7.2 1.7e-09 37.6 7.2 1.6 1 0 0 1 1 1 1 WW domain RRM_7 PF16367.5 ORF47523 - 0.00093 19.3 0.2 0.4 10.8 0.0 2.7 2 1 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 ORF47523 - 0.026 14.5 0.1 3.5 7.7 0.0 2.4 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif RNA_bind PF08675.11 ORF47523 - 0.059 13.4 0.1 0.25 11.4 0.0 1.9 2 0 0 2 2 2 0 RNA binding domain PKcGMP_CC PF16808.5 ORF4742 - 0.00034 20.4 2.4 0.11 12.4 0.0 3.1 2 1 1 3 3 3 3 Coiled-coil N-terminus of cGMP-dependent protein kinase DivIC PF04977.15 ORF4742 - 0.0067 16.2 1.5 0.0067 16.2 1.5 3.0 2 1 1 3 3 3 1 Septum formation initiator YabA PF06156.13 ORF4742 - 0.03 14.9 4.0 0.13 12.9 4.0 2.2 1 0 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF4742 - 0.067 13.8 2.4 0.22 12.2 2.4 2.0 1 0 0 1 1 1 0 SlyX ABC_tran_CTD PF16326.5 ORF4742 - 0.15 12.4 2.7 0.35 11.1 1.8 2.1 2 0 0 2 2 2 0 ABC transporter C-terminal domain Med4 PF10018.9 ORF4742 - 0.3 10.7 5.9 0.66 9.6 5.9 1.6 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 CEP209_CC5 PF16574.5 ORF4742 - 0.3 11.2 7.1 0.079 13.1 1.8 2.6 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 DUF4795 PF16043.5 ORF4742 - 0.35 10.4 14.7 0.35 10.4 13.2 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) HIP1_clath_bdg PF16515.5 ORF4742 - 1.8 9.2 6.8 5.6 7.6 3.4 2.7 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Fez1 PF06818.15 ORF4742 - 6 7.3 12.0 14 6.1 11.9 1.9 1 1 0 1 1 1 0 Fez1 FAM76 PF16046.5 ORF4742 - 7.9 5.7 12.9 1 8.7 7.4 2.2 1 1 1 2 2 2 0 FAM76 protein DUF2524 PF10732.9 ORF4742 - 9.1 6.7 8.1 17 5.8 0.1 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF2524) IQ PF00612.27 ORF45618 - 0.15 11.9 17.9 0.85 9.6 3.7 3.0 3 0 0 3 3 3 0 IQ calmodulin-binding motif DUF2072 PF09845.9 ORF45618 - 0.17 12.1 3.0 0.62 10.3 3.0 1.9 1 0 0 1 1 1 0 Zn-ribbon containing protein ABC_cobalt PF09819.9 ORF45608 - 0.031 14.4 0.1 0.068 13.3 0.1 1.5 1 0 0 1 1 1 0 ABC-type cobalt transport system, permease component DSPc PF00782.20 ORF34695 - 0.0019 18.0 0.6 0.0043 16.9 0.0 1.9 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Tam41_Mmp37 PF09139.11 ORF34695 - 0.85 9.0 6.5 0.61 9.5 4.4 1.6 1 1 0 1 1 1 0 Phosphatidate cytidylyltransferase, mitochondrial TTL PF03133.15 ORF29890 - 0.0041 16.3 0.0 0.16 11.1 0.0 2.1 2 0 0 2 2 2 2 Tubulin-tyrosine ligase family Fib_alpha PF08702.10 ORF28963 - 0.0054 16.9 30.3 0.0065 16.7 8.9 3.0 1 1 2 3 3 3 2 Fibrinogen alpha/beta chain family DUF4407 PF14362.6 ORF28963 - 0.026 13.9 4.4 0.28 10.5 0.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) PGAP1 PF07819.13 ORF28963 - 0.028 14.1 1.0 0.072 12.8 1.0 1.7 1 0 0 1 1 1 0 PGAP1-like protein SAS-6_N PF16531.5 ORF28963 - 0.24 12.0 5.5 4.2 8.0 5.5 2.8 1 1 0 1 1 1 0 Centriolar protein SAS N-terminal DUF16 PF01519.16 ORF28963 - 0.51 10.8 24.1 1.3 9.5 7.2 3.7 1 1 2 3 3 3 0 Protein of unknown function DUF16 SlyX PF04102.12 ORF28963 - 1.1 10.0 4.0 2.3 8.9 0.5 3.1 3 0 0 3 3 3 0 SlyX Asp PF00026.23 ORF26712 - 2.8e-16 59.8 0.0 4.4e-16 59.2 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF26712 - 1.3e-15 57.6 0.0 1.8e-15 57.1 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal NDK PF00334.19 ORF26617 - 3.3e-07 30.4 0.0 0.0023 18.0 0.0 2.2 2 0 0 2 2 2 2 Nucleoside diphosphate kinase RRM_1 PF00076.22 ORF23580 - 3.1e-28 97.4 0.2 5.4e-14 51.8 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 ORF23580 - 7.9e-10 38.7 7.2 1.7e-09 37.6 7.2 1.6 1 0 0 1 1 1 1 WW domain RRM_7 PF16367.5 ORF23580 - 0.00093 19.3 0.2 0.4 10.8 0.0 2.7 2 1 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 ORF23580 - 0.026 14.5 0.1 3.5 7.7 0.0 2.4 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif RNA_bind PF08675.11 ORF23580 - 0.059 13.4 0.1 0.25 11.4 0.0 1.9 2 0 0 2 2 2 0 RNA binding domain DUF2935 PF11155.8 ORF23258 - 0.16 12.3 3.6 6.3 7.1 0.9 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) ISG65-75 PF11727.8 ORF23258 - 0.22 10.7 4.3 0.8 8.9 0.4 2.1 1 1 1 2 2 2 0 Invariant surface glycoprotein DUF4956 PF16316.5 ORF189 - 0.15 11.8 0.0 0.34 10.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4956) DUF2911 PF11138.8 ORF16906 - 0.07 13.0 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2911) cNMP_binding PF00027.29 ORF14171 - 0.00013 22.0 0.0 0.00021 21.3 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Exo_endo_phos PF03372.23 ORF1284 - 1.2e-08 34.8 0.0 2.8e-08 33.6 0.0 1.7 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF1284 - 0.017 14.9 0.1 0.034 14.0 0.1 1.5 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase EF-hand_1 PF00036.32 ORF109971 - 4.6e-06 25.8 0.0 1.2e-05 24.5 0.0 1.7 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF109971 - 6.2e-06 26.0 0.1 1.1e-05 25.1 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF109971 - 0.00011 21.6 0.1 0.00026 20.3 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF109971 - 0.00023 20.9 0.1 0.00055 19.6 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF109971 - 0.0024 18.3 0.0 0.0071 16.8 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_4 PF12763.7 ORF109971 - 0.0039 17.1 0.1 0.0084 16.0 0.1 1.6 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand I_LWEQ PF01608.17 ORF109971 - 1.5 9.1 9.8 3.1 8.0 9.8 1.4 1 0 0 1 1 1 0 I/LWEQ domain Vfa1 PF08432.10 ORF109971 - 4.8 7.5 12.4 8.4 6.7 12.4 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF1298 PF06974.13 ORF109756 - 2e-19 70.0 0.0 5e-19 68.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF109756 - 0.00011 22.1 0.0 0.00025 20.9 0.0 1.5 2 0 0 2 2 2 1 Wax ester synthase-like Acyl-CoA acyltransferase domain MIP PF00230.20 ORF103118 - 3.5e-28 98.9 9.0 4.4e-28 98.5 8.2 1.5 1 1 0 1 1 1 1 Major intrinsic protein MIP PF00230.20 ORF101841 - 3.5e-28 98.9 9.0 4.4e-28 98.5 8.2 1.5 1 1 0 1 1 1 1 Major intrinsic protein Amidohydro_1 PF01979.20 ORF101270 - 7e-55 186.7 2.1 8.2e-55 186.5 2.1 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF101270 - 2.6e-22 79.9 0.0 3.1e-22 79.7 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Bombinin PF05298.11 ORF101270 - 0.049 13.3 0.0 0.22 11.2 0.0 2.0 3 0 0 3 3 3 0 Bombinin Ank_2 PF12796.7 ORF101253 - 2e-37 127.6 0.0 6.3e-17 61.9 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF101253 - 4.6e-27 94.0 2.1 2.5e-10 40.7 0.0 4.5 2 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF101253 - 7.8e-27 93.0 0.8 2.3e-08 34.2 0.1 5.8 1 1 5 6 6 6 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF101253 - 2.1e-22 76.8 1.6 0.00084 19.6 0.0 6.5 6 0 0 6 6 6 5 Ankyrin repeat Ank PF00023.30 ORF101253 - 5.6e-19 67.7 5.1 7.3e-05 23.0 0.3 6.1 5 1 1 6 6 6 4 Ankyrin repeat ubiquitin PF00240.23 ORF101253 - 0.0001 22.0 0.0 0.00019 21.1 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family VWA_3_C PF18571.1 ORF101253 - 0.051 13.4 2.4 46 4.0 0.0 4.6 6 0 0 6 6 6 0 von Willebrand factor type A C-terminal domain zf-RING_2 PF13639.6 ORF101253 - 0.24 11.8 1.2 0.69 10.3 0.2 2.2 2 0 0 2 2 2 0 Ring finger domain ANAPC10 PF03256.16 ORF101253 - 0.26 10.9 0.1 3.1 7.4 0.0 2.1 2 0 0 2 2 2 0 Anaphase-promoting complex, subunit 10 (APC10) Paramecium_SA PF01508.16 NODE_19702_length_991_cov_188.915272_g15086_i0forward_frame_1 - 6.9 7.2 11.0 1.6e+02 2.8 11.0 2.7 1 1 0 1 1 1 0 Paramecium surface antigen domain ChaC PF04752.12 NODE_19687_length_992_cov_3.831766_g15074_i0forward_frame_1 - 0.034 14.2 0.1 0.08 13.0 0.1 1.5 1 0 0 1 1 1 0 ChaC-like protein TAFH PF07531.14 NODE_19664_length_992_cov_229.792059_g758_i3reverse_frame_1 - 0.019 15.1 0.5 0.05 13.7 0.1 1.9 2 0 0 2 2 2 0 NHR1 homology to TAF PMC2NT PF08066.12 NODE_19664_length_992_cov_229.792059_g758_i3reverse_frame_1 - 0.024 15.3 6.3 5.4 7.8 0.1 4.0 2 1 2 4 4 4 0 PMC2NT (NUC016) domain SapB_1 PF05184.15 NODE_19664_length_992_cov_229.792059_g758_i3reverse_frame_1 - 0.031 14.3 0.5 0.47 10.5 0.5 2.9 2 0 0 2 2 2 0 Saposin-like type B, region 1 Ribosomal_S30AE PF02482.19 NODE_19664_length_992_cov_229.792059_g758_i3reverse_frame_1 - 0.068 14.0 0.1 0.2 12.5 0.1 1.8 1 0 0 1 1 1 0 Sigma 54 modulation protein / S30EA ribosomal protein CPG4 PF15481.6 NODE_19664_length_992_cov_229.792059_g758_i3reverse_frame_1 - 0.1 13.2 4.2 0.28 11.8 0.8 2.7 3 0 0 3 3 3 0 Chondroitin proteoglycan 4 DUF3978 PF13123.6 NODE_19664_length_992_cov_229.792059_g758_i3forward_frame_1 - 0.05 13.3 0.4 0.05 13.3 0.4 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3978) Ldl_recept_a PF00057.18 NODE_19601_length_994_cov_2998.524505_g11360_i5reverse_frame_2 - 2.1 8.6 6.2 0.62 10.3 0.3 2.8 3 0 0 3 3 3 0 Low-density lipoprotein receptor domain class A PHR PF08005.12 NODE_19578_length_995_cov_499.866667_g14981_i0forward_frame_2 - 0.017 15.8 1.6 0.037 14.7 0.0 2.1 2 1 0 2 2 2 0 PHR domain ZapB PF06005.12 NODE_19578_length_995_cov_499.866667_g14981_i0forward_frame_2 - 0.092 13.2 3.3 0.22 12.0 1.3 2.2 2 0 0 2 2 2 0 Cell division protein ZapB zf-C2HC_2 PF13913.6 NODE_19578_length_995_cov_499.866667_g14981_i0forward_frame_2 - 0.17 11.9 1.1 0.3 11.1 1.1 1.4 1 0 0 1 1 1 0 zinc-finger of a C2HC-type DivIC PF04977.15 NODE_19578_length_995_cov_499.866667_g14981_i0forward_frame_2 - 1.6 8.5 5.5 0.25 11.1 1.4 1.7 2 0 0 2 2 2 0 Septum formation initiator DNA_ligase_aden PF01653.18 NODE_19568_length_996_cov_4.066597_g14973_i0reverse_frame_2 - 2.1e-13 50.0 0.1 3.6e-07 29.6 0.0 2.1 2 0 0 2 2 2 2 NAD-dependent DNA ligase adenylation domain Vpu PF00558.19 NODE_19568_length_996_cov_4.066597_g14973_i0reverse_frame_2 - 0.095 12.5 0.5 0.17 11.7 0.5 1.3 1 0 0 1 1 1 0 Vpu protein PocR PF10114.9 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_3 - 0.032 14.0 0.1 0.051 13.4 0.1 1.3 1 0 0 1 1 1 0 Sensory domain found in PocR Guanylate_kin PF00625.21 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_2 - 2.8e-32 111.9 0.0 3.8e-32 111.4 0.0 1.2 1 0 0 1 1 1 1 Guanylate kinase RsgA_GTPase PF03193.16 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_2 - 0.0018 18.2 0.0 0.0029 17.5 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_2 - 0.0021 18.1 0.0 0.017 15.2 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_16 PF13191.6 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_2 - 0.0098 16.3 0.0 0.018 15.4 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_2 - 0.025 15.1 0.0 0.049 14.1 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_22 PF13401.6 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_2 - 0.049 13.9 0.0 0.087 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_35 PF14516.6 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_2 - 0.14 11.0 0.0 0.2 10.4 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain AAA_29 PF13555.6 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_2 - 0.14 11.9 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain T2SSE PF00437.20 NODE_19568_length_996_cov_4.066597_g14973_i0forward_frame_2 - 0.21 10.6 0.0 0.32 10.0 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein Cornifin PF02389.15 NODE_19548_length_996_cov_295.150884_g14956_i0forward_frame_3 - 0.00023 21.4 18.9 0.021 15.0 3.0 3.5 2 2 1 3 3 3 3 Cornifin (SPRR) family Voltage_CLC PF00654.20 ORF9878 - 1.1e-72 245.3 31.1 1.2e-72 245.1 31.1 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel TFIIA PF03153.13 ORF97623 - 1.4 8.9 28.2 2.1 8.3 28.2 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit CdiI_2 PF18593.1 ORF92831 - 0.06 14.0 1.8 0.18 12.5 1.8 1.9 1 0 0 1 1 1 0 CdiI immunity protein zf-CCHC PF00098.23 ORF92831 - 0.17 12.0 0.2 0.31 11.2 0.2 1.5 1 0 0 1 1 1 0 Zinc knuckle DUF2475 PF10629.9 ORF86438 - 5.7e-07 29.7 2.0 0.013 15.7 0.0 3.4 3 0 0 3 3 3 2 Protein of unknown function (DUF2475) DUF1759 PF03564.15 ORF82790 - 0.0063 16.4 0.5 0.0063 16.4 0.5 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1759) DUF948 PF06103.11 ORF82790 - 0.024 14.9 5.2 0.034 14.4 0.7 2.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF3584 PF12128.8 ORF82790 - 0.051 11.1 20.8 0.012 13.2 6.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) KxDL PF10241.9 ORF82790 - 0.086 13.1 6.9 2.1 8.7 2.3 2.9 2 1 0 2 2 2 0 Uncharacterized conserved protein UPF0242 PF06785.11 ORF82790 - 0.11 12.6 13.2 0.098 12.7 2.9 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus I_LWEQ PF01608.17 ORF82790 - 0.66 10.2 21.4 0.13 12.5 10.5 2.3 2 0 0 2 2 2 0 I/LWEQ domain Occludin_ELL PF07303.13 ORF82790 - 0.92 10.3 5.4 0.14 12.9 0.8 2.0 2 1 0 2 2 2 0 Occludin homology domain BBS1 PF14779.6 ORF82790 - 3.3 7.1 7.1 0.46 9.9 1.8 1.9 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 1 DUF1664 PF07889.12 ORF82790 - 9.4 6.3 8.2 2.2 8.3 1.5 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) MORN PF02493.20 ORF78778 - 6.1e-52 170.5 87.7 3.8e-07 29.6 1.2 10.5 11 0 0 11 11 11 9 MORN repeat Ank_2 PF12796.7 ORF77194 - 2.5e-13 50.4 0.0 1.4e-05 25.5 0.0 2.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF77194 - 7.2e-08 32.1 0.0 0.0093 16.4 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF77194 - 2.6e-06 27.6 0.2 0.0011 19.3 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF77194 - 9.8e-06 25.8 0.3 0.064 13.7 0.0 2.7 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF77194 - 0.015 15.9 0.0 0.22 12.1 0.1 2.8 3 1 1 4 4 4 0 Ankyrin repeats (many copies) cobW PF02492.19 ORF74540 - 4.8e-31 107.7 1.5 6.6e-31 107.2 1.5 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF74540 - 1.6e-17 63.2 0.0 3e-17 62.3 0.0 1.5 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain LBR_tudor PF09465.10 ORF74540 - 0.021 14.6 0.0 0.041 13.7 0.0 1.4 1 0 0 1 1 1 0 Lamin-B receptor of TUDOR domain GTP_EFTU PF00009.27 ORF74540 - 0.17 11.4 2.3 0.34 10.4 2.3 1.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain Tudor-knot PF11717.8 ORF73095 - 0.051 13.5 0.6 0.13 12.2 0.6 1.7 1 0 0 1 1 1 0 RNA binding activity-knot of a chromodomain MBT PF02820.18 ORF73095 - 0.091 13.1 0.0 0.17 12.2 0.0 1.4 1 0 0 1 1 1 0 mbt repeat Gemini_AL2 PF01440.16 ORF73095 - 1.5 9.3 13.5 0.92 10.0 1.2 2.4 2 0 0 2 2 2 0 Geminivirus AL2 protein GlcNAc-1_reg PF18440.1 ORF72862 - 0.12 12.6 1.5 1.6 9.0 0.5 2.6 2 0 0 2 2 2 0 Putative GlcNAc-1 phosphotransferase regulatory domain zf-C5HC2 PF02928.16 ORF72862 - 0.35 11.3 2.5 0.8 10.1 2.5 1.7 1 0 0 1 1 1 0 C5HC2 zinc finger Prominin PF05478.11 ORF70467 - 0.25 9.2 0.0 0.38 8.7 0.0 1.2 1 0 0 1 1 1 0 Prominin ABC2_membrane PF01061.24 ORF69081 - 4.5e-17 62.2 4.6 5.8e-17 61.8 4.6 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC_tran PF00005.27 ORF69081 - 1.7e-07 31.9 0.1 4e-07 30.6 0.0 1.7 2 0 0 2 2 2 1 ABC transporter FCH PF00611.23 ORF69081 - 0.052 13.8 0.0 0.099 12.9 0.0 1.4 1 0 0 1 1 1 0 Fes/CIP4, and EFC/F-BAR homology domain AAA_21 PF13304.6 ORF69081 - 0.13 12.0 0.1 0.3 10.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks42.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks42.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks42.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks42.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Nucleos_tra2_C PF07662.13 ORF68605 - 0.032 14.1 0.1 0.061 13.2 0.1 1.5 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus Asp PF00026.23 ORF61545 - 8e-05 22.2 0.0 0.012 15.1 0.0 2.7 1 1 1 2 2 2 2 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF61545 - 0.0044 16.8 0.0 0.008 16.0 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Tme5_EGF_like PF09064.10 ORF61545 - 0.42 10.6 1.5 0.48 10.4 0.3 1.7 2 0 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like Patatin PF01734.22 ORF58747 - 1e-19 71.5 0.0 2.5e-19 70.3 0.0 1.6 1 1 0 1 1 1 1 Patatin-like phospholipase PDDEXK_3 PF13366.6 ORF58747 - 0.04 14.3 0.2 0.2 12.0 0.2 2.1 1 1 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Glyco_hydro_38N PF01074.22 ORF56311 - 1.6e-35 122.9 3.3 2e-35 122.6 3.3 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF56311 - 0.019 15.1 0.1 0.044 13.9 0.1 1.6 1 0 0 1 1 1 0 Alpha mannosidase middle domain PG_binding_2 PF08823.11 ORF56311 - 0.066 13.5 0.6 1.1 9.6 0.0 2.6 3 0 0 3 3 3 0 Putative peptidoglycan binding domain DUF5082 PF16888.5 ORF53300 - 0.00052 20.3 16.8 0.00052 20.3 16.8 3.7 1 1 2 3 3 3 1 Domain of unknown function (DUF5082) Fzo_mitofusin PF04799.13 ORF53300 - 0.92 9.0 35.8 0.042 13.4 5.0 4.2 3 1 1 4 4 4 0 fzo-like conserved region CENP-Q PF13094.6 ORF53300 - 1.3 9.2 60.6 0.78 9.9 25.9 3.1 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF948 PF06103.11 ORF53300 - 2.1 8.6 21.3 0.27 11.5 1.3 3.7 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) TIR-like PF10137.9 ORF53300 - 5.8 6.9 6.3 2.4 8.1 0.3 2.9 1 1 2 3 3 3 0 Predicted nucleotide-binding protein containing TIR-like domain Filament PF00038.21 ORF53300 - 6.6 6.2 52.8 1.8 8.1 10.4 3.9 1 1 2 4 4 4 0 Intermediate filament protein Polysacc_synt_3 PF13440.6 ORF51412 - 6.9e-06 25.5 11.7 6.9e-06 25.5 11.7 1.4 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Glyco_hydro_38N PF01074.22 ORF41128 - 1.6e-35 122.9 3.3 2e-35 122.6 3.3 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF41128 - 0.019 15.1 0.1 0.044 13.9 0.1 1.6 1 0 0 1 1 1 0 Alpha mannosidase middle domain PG_binding_2 PF08823.11 ORF41128 - 0.066 13.5 0.6 1.1 9.6 0.0 2.6 3 0 0 3 3 3 0 Putative peptidoglycan binding domain FHA PF00498.26 ORF35584 - 3e-09 37.1 0.0 2.4e-06 27.8 0.0 2.4 2 0 0 2 2 2 2 FHA domain BUD22 PF09073.10 ORF35012 - 7.8e-05 22.2 22.9 0.00014 21.4 22.9 1.4 1 0 0 1 1 1 1 BUD22 Cwf_Cwc_15 PF04889.12 ORF35012 - 0.001 18.8 29.7 0.001 18.8 29.7 1.7 2 0 0 2 2 2 1 Cwf15/Cwc15 cell cycle control protein PPP4R2 PF09184.11 ORF35012 - 0.0034 17.0 22.1 0.0034 17.0 22.1 2.0 2 0 0 2 2 2 1 PPP4R2 Fve PF09259.11 ORF35012 - 0.066 13.4 0.8 0.17 12.1 0.2 1.9 2 1 0 2 2 2 0 Fungal immunomodulatory protein Fve DUF2457 PF10446.9 ORF35012 - 3.3 6.8 39.4 4.5 6.3 39.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) CDC27 PF09507.10 ORF35012 - 3.6 6.9 29.3 0.018 14.5 19.6 1.9 2 0 0 2 2 2 0 DNA polymerase subunit Cdc27 DUF913 PF06025.12 ORF35012 - 3.7 6.4 11.2 7.3 5.5 11.2 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF2722 PF10846.8 ORF35012 - 5 5.9 12.7 7.6 5.4 12.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) DUF3295 PF11702.8 ORF35012 - 7 5.9 21.7 11 5.2 21.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) TFB6 PF17110.5 ORF35012 - 8.1 6.2 14.2 18 5.0 14.2 1.7 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH Ion_trans PF00520.31 ORF34622 - 0.0025 17.1 0.4 0.0036 16.6 0.4 1.2 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 ORF34622 - 0.0051 16.7 0.1 0.0051 16.6 0.1 1.2 1 0 0 1 1 1 1 Ligand-gated ion channel Ion_trans_2 PF07885.16 ORF34622 - 0.075 13.0 0.0 0.17 11.8 0.0 1.7 1 0 0 1 1 1 0 Ion channel TauD PF02668.16 ORF28365 - 2.3e-24 86.6 0.0 1.2e-23 84.3 0.0 1.9 1 1 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family CsiD PF08943.10 ORF28365 - 0.0015 17.7 0.0 0.0022 17.2 0.0 1.2 1 0 0 1 1 1 1 CsiD DUF2016 PF09436.10 ORF28365 - 0.02 14.7 0.0 0.27 11.1 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF2016) RIO1 PF01163.22 ORF28209 - 8e-45 152.8 0.2 8e-45 152.8 0.2 1.5 2 0 0 2 2 2 1 RIO1 family APH PF01636.23 ORF28209 - 3e-08 33.9 0.9 0.00017 21.6 0.2 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 ORF28209 - 4e-07 29.6 0.2 7.1e-06 25.5 0.2 2.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Rio2_N PF09202.11 ORF28209 - 1e-06 28.9 2.3 1.2e-06 28.6 0.4 2.2 3 0 0 3 3 3 1 Rio2, N-terminal Kinase-like PF14531.6 ORF28209 - 0.066 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Kinase-like HlyD_D23 PF16576.5 ORF26581 - 3.7e-20 72.1 5.5 2.8e-18 65.9 5.5 2.8 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 ORF26581 - 9.9e-16 58.4 0.5 1.5e-12 48.1 0.0 2.9 2 1 1 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 ORF26581 - 2.1e-13 49.9 0.0 2.1e-13 49.9 0.0 3.3 4 0 0 4 4 4 1 Biotin-lipoyl like OEP PF02321.18 ORF26581 - 0.00052 19.9 27.7 0.037 13.8 7.1 2.9 1 1 1 2 2 2 2 Outer membrane efflux protein DUF4407 PF14362.6 ORF26581 - 0.0051 16.2 10.0 0.0079 15.6 10.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) HlyD PF00529.20 ORF26581 - 0.0056 16.5 0.9 0.016 15.1 0.4 2.0 1 1 1 2 2 2 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 ORF26581 - 0.019 14.8 0.1 0.11 12.3 0.0 2.1 2 0 0 2 2 2 0 Biotin-requiring enzyme RRP36 PF06102.12 ORF26581 - 0.28 11.1 4.6 0.45 10.5 4.6 1.2 1 0 0 1 1 1 0 rRNA biogenesis protein RRP36 zf-C3HC4_3 PF13920.6 ORF2285 - 4.4e-13 48.9 9.5 4.4e-13 48.9 9.5 2.7 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF2285 - 6.1e-08 32.4 9.5 6.1e-08 32.4 9.5 2.6 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF2285 - 2.1e-05 24.8 9.9 2.1e-05 24.8 9.9 2.8 3 0 0 3 3 3 1 Ring finger domain zf-RING_5 PF14634.6 ORF2285 - 0.0015 18.5 9.8 0.0015 18.5 9.8 2.8 2 1 1 3 3 3 1 zinc-RING finger domain CCDC53 PF10152.9 ORF2285 - 0.038 14.4 0.9 0.053 13.9 0.9 1.2 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex ApoM PF11032.8 ORF2285 - 0.12 12.1 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 ApoM domain zf-RING_UBOX PF13445.6 ORF2285 - 0.56 10.3 16.2 1.3 9.1 4.8 2.9 2 1 0 2 2 2 0 RING-type zinc-finger NolX PF05819.11 ORF22045 - 0.12 11.7 5.0 0.044 13.1 2.0 1.6 2 0 0 2 2 2 0 NolX protein Ribosomal_S26e PF01283.19 ORF22045 - 0.14 12.6 0.8 0.45 11.0 0.8 1.7 1 1 0 1 1 1 0 Ribosomal protein S26e DUF3439 PF11921.8 ORF22045 - 4.6 7.2 14.3 2.4 8.1 6.5 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF3439) Kinesin PF00225.23 ORF21912 - 1.1e-87 294.1 0.4 1.4e-87 293.7 0.4 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF21912 - 3.5e-20 72.5 0.1 3.4e-19 69.2 0.1 2.3 1 1 0 1 1 1 1 Microtubule binding Pyr_redox_2 PF07992.14 ORF18655 - 4.1e-39 134.6 0.0 5.1e-39 134.3 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF18655 - 5.8e-14 52.4 0.0 2.2e-13 50.6 0.0 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF18655 - 6.3e-09 36.1 0.0 1.4e-08 35.0 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 ORF18655 - 2.2e-05 23.8 0.0 3.5e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF18655 - 0.0073 15.6 0.0 0.01 15.1 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.6 ORF18655 - 0.013 14.7 0.0 0.21 10.7 0.0 2.1 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) 3HCDH_N PF02737.18 ORF18655 - 0.015 15.2 0.0 0.024 14.5 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ThiF PF00899.21 ORF18655 - 0.017 14.5 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 ThiF family ApbA PF02558.16 ORF18655 - 0.042 13.5 0.0 0.091 12.4 0.0 1.5 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 ORF18655 - 0.056 12.8 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 ORF18655 - 0.11 13.0 0.0 0.24 11.8 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding F420_oxidored PF03807.17 ORF18655 - 0.13 12.8 0.1 1.9 9.1 0.0 2.6 2 1 1 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent Lycopene_cycl PF05834.12 ORF18655 - 0.15 11.0 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Kinesin PF00225.23 ORF180 - 1.1e-87 294.1 0.4 1.4e-87 293.7 0.4 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF180 - 3.5e-20 72.5 0.1 3.4e-19 69.2 0.1 2.3 1 1 0 1 1 1 1 Microtubule binding APG6_N PF17675.1 ORF109574 - 0.0058 17.1 8.4 0.012 16.2 8.4 1.4 1 0 0 1 1 1 1 Apg6 coiled-coil region FtsL PF04999.13 ORF109574 - 0.14 12.2 4.3 1.4 9.0 3.4 2.3 2 0 0 2 2 2 0 Cell division protein FtsL DUF2514 PF10721.9 ORF109574 - 0.17 11.9 9.1 2.2 8.3 3.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2514) DUF4834 PF16118.5 ORF109574 - 0.23 12.5 0.0 0.23 12.5 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) Phage_holin_3_6 PF07332.11 ORF109574 - 0.26 11.3 0.1 0.26 11.3 0.1 2.2 3 1 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III OmpH PF03938.14 ORF109574 - 1.9 8.9 7.3 3.1 8.1 7.3 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF501 PF04417.12 ORF109574 - 2 8.2 6.0 1.5 8.7 2.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF501) MctB PF11382.8 ORF109574 - 6.3 6.4 7.2 2.7 7.6 0.9 2.4 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB FUSC PF04632.12 ORF109574 - 9.4 4.6 6.8 6.2 5.2 0.1 2.0 2 0 0 2 2 2 0 Fusaric acid resistance protein family Glyco_hydro_38N PF01074.22 ORF107798 - 1.6e-35 122.9 3.3 2e-35 122.6 3.3 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF107798 - 0.019 15.1 0.1 0.044 13.9 0.1 1.6 1 0 0 1 1 1 0 Alpha mannosidase middle domain PG_binding_2 PF08823.11 ORF107798 - 0.066 13.5 0.6 1.1 9.6 0.0 2.6 3 0 0 3 3 3 0 Putative peptidoglycan binding domain Pkinase PF00069.25 ORF102861 - 1.3e-35 123.0 0.0 1.9e-35 122.5 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF102861 - 1.2e-15 57.5 0.0 1.7e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF102861 - 0.0022 16.8 0.1 0.0089 14.9 0.0 1.8 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF102861 - 0.11 12.4 0.1 0.11 12.4 0.1 1.5 2 0 0 2 2 2 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF102861 - 0.15 11.6 0.0 0.29 10.7 0.0 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DMRL_synthase PF00885.19 ORF10000 - 5.6e-49 165.6 0.1 9.8e-49 164.8 0.1 1.4 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DHBP_synthase PF00926.19 ORF10000 - 1.4e-41 142.2 0.0 1.8e-41 141.8 0.0 1.2 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase 2-Hacid_dh PF00389.30 NODE_19718_length_991_cov_3.351464_g15101_i0reverse_frame_3 - 3.5e-15 55.9 0.0 4.7e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 2-Hacid_dh_C PF02826.19 NODE_19718_length_991_cov_3.351464_g15101_i0reverse_frame_3 - 5.8e-13 48.6 0.0 8.7e-13 48.0 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Metal_resist PF13801.6 NODE_19718_length_991_cov_3.351464_g15101_i0forward_frame_2 - 0.89 9.7 6.0 0.3 11.3 0.2 2.9 2 2 0 2 2 2 0 Heavy-metal resistance Plasmodium_HRP PF05403.11 NODE_19702_length_991_cov_188.915272_g15086_i0reverse_frame_3 - 8.6e-10 38.8 16.6 8.6e-10 38.8 16.6 1.6 2 0 0 2 2 2 1 Plasmodium histidine-rich protein (HRPII/III) DUF4573 PF15140.6 NODE_19702_length_991_cov_188.915272_g15086_i0reverse_frame_3 - 7.8e-08 32.3 11.9 7.8e-08 32.3 11.9 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF4573) Glyco_hydro_2_N PF02837.18 NODE_19687_length_992_cov_3.831766_g15074_i0reverse_frame_2 - 2.8e-48 164.0 0.3 4.3e-48 163.4 0.3 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, sugar binding domain Peripla_BP_3 PF13377.6 NODE_19687_length_992_cov_3.831766_g15074_i0reverse_frame_2 - 9e-05 22.9 0.0 0.00024 21.5 0.0 1.7 2 0 0 2 2 2 1 Periplasmic binding protein-like domain DUF2931 PF11153.8 NODE_19657_length_992_cov_430.621735_g3293_i5forward_frame_3 - 0.16 11.6 0.1 0.23 11.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) DUF2207 PF09972.9 NODE_19644_length_993_cov_79.532359_g15037_i0forward_frame_3 - 0.039 12.7 1.4 0.057 12.2 1.4 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) adh_short PF00106.25 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 1.3e-33 116.1 0.0 1.7e-33 115.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 3.8e-17 62.6 0.0 5.4e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 0.00013 21.9 0.0 0.00024 21.1 0.0 1.4 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 0.013 14.9 0.0 0.03 13.7 0.0 1.6 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) ApbA PF02558.16 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 0.087 12.5 0.0 0.19 11.4 0.0 1.6 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Sulfatase PF00884.23 ORF98398 - 1e-21 77.7 0.0 1.5e-21 77.1 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 ORF98398 - 1.3e-06 29.2 0.0 8.6e-05 23.3 0.0 2.5 1 1 0 1 1 1 1 C-terminal region of aryl-sulfatase DUF1501 PF07394.12 ORF98398 - 0.00053 19.2 0.0 0.00068 18.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1501) AsnA PF03590.15 ORF9769 - 4.6e-93 311.1 0.0 5.5e-93 310.9 0.0 1.1 1 0 0 1 1 1 1 Aspartate-ammonia ligase tRNA-synt_2 PF00152.20 ORF9769 - 0.00026 20.2 0.0 0.005 16.0 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class II (D, K and N) DUF5569 PF17729.1 ORF9769 - 0.22 11.4 0.0 0.37 10.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5569) Peptidase_C1 PF00112.23 ORF97136 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF97136 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF97136 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF97136 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF94971 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF94971 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF94971 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF94971 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Glycolytic PF00274.19 ORF94813 - 5.7e-62 209.5 0.0 6.9e-62 209.2 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Peptidase_C1 PF00112.23 ORF94200 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF94200 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF94200 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF94200 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Pkinase PF00069.25 ORF94054 - 3.1e-36 125.1 0.0 4.3e-36 124.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94054 - 3.3e-20 72.4 0.0 1.6e-19 70.2 0.0 1.9 1 1 1 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF94054 - 0.0033 17.4 0.1 0.013 15.4 0.1 1.8 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF94054 - 0.0087 15.4 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF94054 - 0.036 13.4 0.2 0.14 11.5 0.1 1.8 1 1 1 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Peptidase_C1 PF00112.23 ORF92941 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF92941 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF92941 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF92941 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF92678 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF92678 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF92678 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF92678 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane FUSC PF04632.12 ORF87535 - 0.26 9.8 23.3 0.32 9.5 23.3 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF3584 PF12128.8 ORF87535 - 2.8 5.3 42.5 3.6 5.0 42.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) RR_TM4-6 PF06459.12 ORF87535 - 4.5 7.0 20.5 6.5 6.5 20.5 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Ank_2 PF12796.7 ORF87468 - 1.6e-55 185.7 11.9 9.4e-17 61.4 0.2 3.9 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF87468 - 2.1e-39 133.4 7.3 9.9e-11 41.9 0.1 5.2 3 2 2 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF87468 - 3e-29 100.1 4.8 0.00047 20.5 0.1 7.6 8 0 0 8 8 8 6 Ankyrin repeat Ank_3 PF13606.6 ORF87468 - 1.1e-28 96.0 0.7 0.001 19.4 0.0 7.6 8 0 0 8 8 8 7 Ankyrin repeat Ank_5 PF13857.6 ORF87468 - 2.3e-25 88.3 11.4 2.3e-05 24.6 0.4 6.9 2 2 5 7 7 7 7 Ankyrin repeats (many copies) YlzJ PF14035.6 ORF87468 - 1.5e-08 34.7 0.0 1.5 9.1 0.0 5.8 2 2 4 6 6 6 3 YlzJ-like protein MitMem_reg PF13012.6 ORF87256 - 6.6e-12 45.8 1.5 2.1e-11 44.2 1.5 1.9 1 1 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 ORF87256 - 0.00033 20.6 0.1 0.0008 19.4 0.1 1.7 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease T4_Rnl2_C PF18043.1 ORF87256 - 0.048 13.8 0.1 0.16 12.1 0.1 1.9 1 0 0 1 1 1 0 T4 RNA ligase 2 C-terminal FAD_binding_2 PF00890.24 ORF83819 - 0.014 14.5 0.1 0.057 12.5 0.0 1.8 2 0 0 2 2 2 0 FAD binding domain GMC_oxred_N PF00732.19 ORF83819 - 0.022 14.1 0.0 0.036 13.4 0.0 1.2 1 0 0 1 1 1 0 GMC oxidoreductase DAO PF01266.24 ORF83819 - 0.046 13.3 2.4 0.19 11.3 2.4 1.9 1 1 0 1 1 1 0 FAD dependent oxidoreductase SBP_bac_3 PF00497.20 ORF79837 - 7.5e-06 25.5 0.0 1e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Flavi_propep PF01570.17 ORF79837 - 0.033 14.1 0.3 0.09 12.7 0.3 1.8 1 0 0 1 1 1 0 Flavivirus polyprotein propeptide Lipase_GDSL_2 PF13472.6 ORF78232 - 1.4e-14 54.9 0.1 2.2e-14 54.3 0.1 1.3 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family CBM_20 PF00686.19 ORF78232 - 2.8e-11 43.2 0.0 5.7e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Starch binding domain B12-binding PF02310.19 ORF78232 - 0.00034 20.6 0.0 0.00076 19.5 0.0 1.5 1 1 0 1 1 1 1 B12 binding domain Lipase_GDSL PF00657.22 ORF78232 - 0.0078 16.2 0.0 0.018 15.1 0.0 1.6 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase RIIa PF02197.17 ORF78232 - 0.013 15.2 0.0 0.035 13.8 0.0 1.7 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit Methyltransf_12 PF08242.12 ORF77777 - 0.037 14.8 0.0 0.13 13.0 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Peptidase_C1 PF00112.23 ORF77088 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF77088 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF77088 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF77088 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane GRIP PF01465.20 ORF76327 - 5.4e-07 29.4 0.0 1.5e-06 28.0 0.0 1.8 1 0 0 1 1 1 1 GRIP domain Baculo_PEP_C PF04513.12 ORF76327 - 1.8 8.6 21.5 0.12 12.4 3.8 3.3 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus TPR_MLP1_2 PF07926.12 ORF76327 - 2.2 8.3 60.3 0.026 14.6 22.7 4.9 1 1 4 5 5 5 0 TPR/MLP1/MLP2-like protein CENP-F_leu_zip PF10473.9 ORF76327 - 3.9 7.5 65.6 1.1 9.3 18.6 4.2 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Filament PF00038.21 ORF76327 - 4.4 6.8 55.7 0.13 11.9 15.1 3.5 1 1 2 3 3 3 0 Intermediate filament protein SlyX PF04102.12 ORF76327 - 6.1 7.5 33.8 0.1 13.2 1.9 5.2 3 1 2 5 5 5 0 SlyX DUF812 PF05667.11 ORF76327 - 6.2 5.6 64.2 8.3 5.2 17.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF812) DUF3584 PF12128.8 ORF76327 - 6.9 4.0 55.9 12 3.2 55.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Rootletin PF15035.6 ORF76327 - 7.4 6.5 49.5 0.019 15.0 19.5 3.1 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion DUF885 PF05960.11 ORF76327 - 9.3 5.8 14.9 2 7.9 5.2 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF885) DDHD PF02862.17 ORF76305 - 7.2e-33 114.6 0.8 3.8e-20 73.0 0.0 2.2 1 1 0 2 2 2 2 DDHD domain Hydrolase_4 PF12146.8 ORF76305 - 0.053 12.8 0.0 0.084 12.1 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 PP2C PF00481.21 ORF76276 - 1.6e-36 126.3 0.0 2e-36 126.0 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF76276 - 2.8e-07 30.4 0.2 1.4e-06 28.1 0.2 1.9 1 1 0 1 1 1 1 Protein phosphatase 2C Peptidase_C1 PF00112.23 ORF75836 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF75836 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF75836 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF75836 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane SUR7 PF06687.12 ORF74310 - 6.2e-05 22.7 2.0 0.0036 17.0 0.0 2.1 1 1 1 2 2 2 1 SUR7/PalI family Sigma_reg_N PF13800.6 ORF74310 - 0.0074 16.6 5.2 0.38 11.1 0.2 3.2 3 0 0 3 3 3 1 Sigma factor regulator N-terminal SdpI PF13630.6 ORF74310 - 0.03 14.5 0.1 0.03 14.5 0.1 3.1 3 0 0 3 3 3 0 SdpI/YhfL protein family MFS_Mycoplasma PF07672.13 ORF74310 - 0.042 13.1 4.2 0.73 9.1 0.1 2.5 3 0 0 3 3 3 0 Mycoplasma MFS transporter Orf78 PF06024.12 ORF74310 - 0.052 13.9 1.6 11 6.4 0.0 2.6 3 0 0 3 3 3 0 Orf78 (ac78) DUF2207 PF09972.9 ORF74310 - 0.12 11.1 6.9 3.8 6.2 0.0 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF74310 - 0.34 11.2 10.7 4.3 7.7 0.4 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) DUF4834 PF16118.5 ORF74310 - 1.6 9.8 10.3 3.4 8.7 0.3 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) SHIPPO-rpt PF07004.12 ORF73872 - 1.3e-06 29.0 16.8 0.16 13.0 0.1 5.4 5 1 0 5 5 5 3 Sperm-tail PG-rich repeat Peripla_BP_3 PF13377.6 ORF72392 - 7.7e-45 153.2 0.0 1.4e-44 152.4 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF72392 - 2.5e-36 125.5 0.0 3.3e-36 125.2 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 ORF72392 - 4.5e-19 68.0 0.6 7.3e-19 67.3 0.6 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 ORF72392 - 1.6e-13 50.8 0.0 1.1e-12 48.1 0.0 2.1 1 1 0 1 1 1 1 Periplasmic binding protein domain Peptidase_C1 PF00112.23 ORF70000 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF70000 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF70000 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF70000 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane SNF PF00209.18 ORF65295 - 1.3e-48 166.0 13.9 1.5e-48 165.8 13.9 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF5392 PF17370.2 ORF65295 - 0.021 14.9 2.8 0.03 14.4 0.1 2.5 3 0 0 3 3 3 0 Family of unknown function (DUF5392) E1-E2_ATPase PF00122.20 ORF65295 - 0.88 9.1 0.0 0.88 9.1 0.0 2.5 3 1 0 3 3 3 0 E1-E2 ATPase DUF3377 PF11857.8 ORF65295 - 2.2 8.2 6.0 2 8.4 0.1 3.3 4 1 0 4 4 4 0 Domain of unknown function (DUF3377) SHIPPO-rpt PF07004.12 ORF62568 - 1.3e-06 29.0 16.8 0.16 13.0 0.1 5.4 5 1 0 5 5 5 3 Sperm-tail PG-rich repeat STAT2_C PF12188.8 ORF61697 - 0.2 11.6 1.0 0.91 9.5 0.0 2.4 3 0 0 3 3 3 0 Signal transducer and activator of transcription 2 C terminal Peptidase_C1 PF00112.23 ORF61567 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF61567 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF61567 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF61567 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF59854 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF59854 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF59854 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF59854 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane GST_C_2 PF13410.6 ORF59618 - 0.0021 18.0 0.0 0.0053 16.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF59618 - 0.0022 18.5 0.0 0.004 17.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Methyltransf_11 PF08241.12 ORF5947 - 2.8e-17 63.1 0.0 5.1e-17 62.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF5947 - 8.9e-17 61.6 0.0 1.7e-16 60.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF5947 - 1.6e-15 57.2 0.0 2.2e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF5947 - 1.6e-12 47.3 0.0 2.2e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 ORF5947 - 2.8e-11 43.2 0.0 6.7e-11 42.0 0.0 1.6 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF5947 - 3.1e-11 43.4 0.0 4.4e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF5947 - 6.4e-09 36.5 0.0 1e-08 35.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF5947 - 0.0004 20.0 0.0 0.00097 18.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 ORF5947 - 0.0075 15.9 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) MetW PF07021.12 ORF5947 - 0.0078 15.8 0.0 0.014 15.0 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.19 ORF5947 - 0.056 13.2 0.0 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Peptidase_C1 PF00112.23 ORF54643 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF54643 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF54643 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF54643 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane SBP_bac_3 PF00497.20 ORF5189 - 7.5e-06 25.5 0.0 1e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Flavi_propep PF01570.17 ORF5189 - 0.032 14.2 0.3 0.09 12.7 0.3 1.8 1 0 0 1 1 1 0 Flavivirus polyprotein propeptide FecCD PF01032.18 ORF4814 - 5.8e-84 281.7 39.3 6.9e-84 281.5 39.3 1.0 1 0 0 1 1 1 1 FecCD transport family Lipase_GDSL_2 PF13472.6 ORF44097 - 1.4e-14 54.9 0.1 2.2e-14 54.3 0.1 1.3 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family CBM_20 PF00686.19 ORF44097 - 2.8e-11 43.2 0.0 5.7e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Starch binding domain B12-binding PF02310.19 ORF44097 - 0.00034 20.6 0.0 0.00076 19.5 0.0 1.5 1 1 0 1 1 1 1 B12 binding domain Lipase_GDSL PF00657.22 ORF44097 - 0.0078 16.2 0.0 0.018 15.1 0.0 1.6 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase RIIa PF02197.17 ORF44097 - 0.013 15.2 0.0 0.035 13.8 0.0 1.7 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit DUF4116 PF13475.6 ORF42344 - 2.4e-28 97.6 0.0 1.9e-15 56.3 0.0 5.3 3 2 2 6 6 6 5 Domain of unknown function (DUF4116) ubiquitin PF00240.23 ORF42344 - 0.0075 16.0 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF42344 - 0.17 12.3 0.0 0.29 11.6 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-like domain Peptidase_C1 PF00112.23 ORF39837 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF39837 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF39837 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF39837 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane p450 PF00067.22 ORF36504 - 2.7e-45 155.0 0.2 3.5e-45 154.6 0.2 1.2 1 0 0 1 1 1 1 Cytochrome P450 Peptidase_C1 PF00112.23 ORF35110 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF35110 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF35110 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF35110 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF32720 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF32720 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF32720 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF32720 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane zf-RING_2 PF13639.6 ORF31195 - 1.8e-05 25.0 2.1 1.8e-05 25.0 2.1 2.3 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF31195 - 5.3e-05 23.4 5.6 0.00012 22.3 5.6 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF31195 - 0.025 14.6 4.5 0.059 13.3 4.5 1.7 1 1 0 1 1 1 0 zinc-RING finger domain zf-RING_11 PF17123.5 ORF31195 - 0.046 13.5 1.4 0.046 13.5 1.4 2.7 3 0 0 3 3 3 0 RING-like zinc finger zf-C3HC4 PF00097.25 ORF31195 - 0.066 13.1 4.4 0.2 11.5 4.4 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF31195 - 0.097 12.7 4.4 0.12 12.4 2.0 2.3 1 1 1 2 2 2 0 RING-type zinc-finger DUF2028 PF09667.10 ORF31195 - 0.11 12.5 0.2 0.15 12.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2028) zf-ANAPC11 PF12861.7 ORF31195 - 0.11 12.5 4.8 0.28 11.3 4.8 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Cauli_DNA-bind PF03310.13 ORF31195 - 0.14 12.2 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Caulimovirus DNA-binding protein FANCL_C PF11793.8 ORF31195 - 0.18 12.0 2.2 0.42 10.8 2.2 1.7 1 0 0 1 1 1 0 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 ORF31195 - 1.5 8.7 8.7 0.49 10.3 2.4 2.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 ORF31195 - 2 8.4 5.9 0.26 11.2 1.1 2.0 2 0 0 2 2 2 0 PHD-finger Peptidase_C1 PF00112.23 ORF30797 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF30797 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF30797 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF30797 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF29837 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF29837 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF29837 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF29837 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF2814 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF2814 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF2814 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF2814 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane DUF3568 PF12092.8 ORF274 - 0.92 9.6 3.1 1.3 9.1 1.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3568) WWE PF02825.20 ORF23999 - 0.025 15.2 0.0 0.058 14.0 0.0 1.5 1 0 0 1 1 1 0 WWE domain Peptidase_C1 PF00112.23 ORF23979 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF23979 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF23979 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF23979 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane zf-RRN7 PF11781.8 ORF23884 - 0.059 13.1 2.5 0.85 9.4 0.2 3.1 3 0 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Methyltransf_21 PF05050.12 ORF13308 - 0.034 14.2 0.0 0.074 13.1 0.0 1.6 1 1 1 2 2 2 0 Methyltransferase FkbM domain Peptidase_C1 PF00112.23 ORF12494 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF12494 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF12494 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF12494 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF12491 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF12491 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF12491 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF12491 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF1079 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF1079 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF1079 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF1079 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF10615 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF10615 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF10615 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF10615 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane DHHC PF01529.20 ORF103789 - 2.9e-12 46.9 1.6 2.9e-12 46.9 1.6 2.2 1 1 1 2 2 2 1 DHHC palmitoyltransferase DUF3516 PF12029.8 ORF101619 - 6.1e-38 131.1 3.1 8.9e-34 117.3 1.4 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF3516) SBP_bac_3 PF00497.20 ORF100994 - 7.5e-06 25.5 0.0 1e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Flavi_propep PF01570.17 ORF100994 - 0.032 14.2 0.3 0.09 12.7 0.3 1.8 1 0 0 1 1 1 0 Flavivirus polyprotein propeptide DUF2232 PF09991.9 NODE_19868_length_986_cov_67.781283_g15219_i0forward_frame_1 - 0.04 13.1 0.3 0.062 12.5 0.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2232) VMA21 PF09446.10 NODE_19868_length_986_cov_67.781283_g15219_i0forward_frame_1 - 0.16 12.1 0.8 0.89 9.7 0.1 2.3 2 0 0 2 2 2 0 VMA21-like domain RCC1_2 PF13540.6 NODE_19803_length_988_cov_110.447009_g15163_i0forward_frame_2 - 4.8e-11 42.2 27.0 0.29 11.0 0.1 8.1 8 1 1 9 9 9 7 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_19803_length_988_cov_110.447009_g15163_i0forward_frame_2 - 1.4e-06 28.5 7.7 16 5.6 0.1 6.8 5 2 1 6 6 6 3 Uncharacterised ACR, YagE family COG1723 Yuri_gagarin PF15934.5 NODE_19803_length_988_cov_110.447009_g15163_i0forward_frame_2 - 0.18 11.6 0.0 6.7 6.5 0.0 2.7 3 0 0 3 3 3 0 Yuri gagarin Capsule_synth PF05159.14 NODE_19803_length_988_cov_110.447009_g15163_i0forward_frame_2 - 0.39 10.1 3.5 11 5.4 0.0 4.1 2 1 4 7 7 7 0 Capsule polysaccharide biosynthesis protein HNHc_6 PF16784.5 NODE_19784_length_989_cov_3.324948_g15149_i0reverse_frame_2 - 0.19 11.3 2.0 0.36 10.3 0.4 2.0 2 0 0 2 2 2 0 Putative HNHc nuclease HlyD_D23 PF16576.5 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 3.2e-18 65.7 10.6 1.8e-17 63.3 10.0 2.1 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 3.1e-15 56.8 7.6 1.5e-13 51.4 0.2 3.1 2 1 1 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 1.8e-08 34.0 3.3 1.8e-08 34.0 3.3 4.1 3 1 1 4 4 4 1 Biotin-lipoyl like Peptidase_M23 PF01551.22 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 0.00018 21.7 1.0 0.27 11.5 0.1 2.7 2 1 0 2 2 2 2 Peptidase family M23 Biotin_lipoyl PF00364.22 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 0.00022 21.0 0.7 0.17 11.8 0.3 2.8 2 0 0 2 2 2 2 Biotin-requiring enzyme HlyD_2 PF12700.7 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 0.00056 18.8 1.6 0.0023 16.8 0.1 2.0 1 1 2 3 3 3 1 HlyD family secretion protein PTS_EIIA_1 PF00358.20 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 0.017 14.9 0.7 6.4 6.6 0.1 2.6 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Thioredoxin_4 PF13462.6 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 0.13 12.5 3.1 0.19 11.9 3.1 1.3 1 0 0 1 1 1 0 Thioredoxin RnfC_N PF13375.6 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 0.27 11.2 1.9 18 5.3 0.2 3.2 3 1 1 4 4 4 0 RnfC Barrel sandwich hybrid domain Atg14 PF10186.9 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 1.7 7.7 7.3 2.8 6.9 7.3 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YqfD PF06898.11 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 2.2 7.1 9.9 0.33 9.7 0.1 2.4 2 1 0 3 3 3 0 Putative stage IV sporulation protein YqfD DivIC PF04977.15 NODE_19784_length_989_cov_3.324948_g15149_i0forward_frame_2 - 6.9 6.5 13.4 1.8 8.4 6.2 2.6 1 1 1 2 2 2 0 Septum formation initiator TMEMspv1-c74-12 PF11044.8 NODE_19769_length_989_cov_301.258910_g15140_i0forward_frame_2 - 0.12 12.4 4.0 0.37 10.8 4.0 1.8 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Arrestin_N PF00339.29 NODE_19735_length_990_cov_174.255497_g15116_i0reverse_frame_3 - 3.4e-08 33.7 0.1 5.9e-08 32.9 0.1 1.4 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 NODE_19735_length_990_cov_174.255497_g15116_i0reverse_frame_3 - 0.11 12.2 0.0 0.2 11.3 0.0 1.5 1 0 0 1 1 1 0 Arrestin_N terminal like JAB PF01398.21 ORF99777 - 9.6e-34 115.9 0.3 8.7e-32 109.6 0.0 2.5 2 0 0 2 2 2 2 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 ORF99777 - 3.2e-32 111.3 0.9 5.3e-32 110.6 0.9 1.4 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function Fas_alpha_ACP PF18325.1 ORF99777 - 0.015 15.7 0.1 0.026 14.9 0.1 1.3 1 0 0 1 1 1 0 Fatty acid synthase subunit alpha Acyl carrier domain EFP PF01132.20 ORF96516 - 0.035 14.1 0.6 0.035 14.1 0.6 1.9 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain Sel_put PF04328.13 ORF96516 - 0.093 12.8 0.1 22 5.2 0.0 2.5 2 0 0 2 2 2 0 Selenoprotein, putative SLBP_RNA_bind PF15247.6 ORF96516 - 1.1 9.4 4.4 12 6.1 0.0 3.3 3 1 0 3 3 3 0 Histone RNA hairpin-binding protein RNA-binding domain GFA PF04828.14 ORF93805 - 4.3e-09 36.6 5.6 1.7e-06 28.3 2.6 2.5 2 0 0 2 2 2 2 Glutathione-dependent formaldehyde-activating enzyme Anoctamin PF04547.12 ORF91069 - 0.0017 17.3 8.2 0.0029 16.5 8.2 1.3 1 1 0 1 1 1 1 Calcium-activated chloride channel RSN1_7TM PF02714.15 ORF91069 - 0.0036 16.7 4.2 0.0036 16.7 4.2 3.0 3 1 0 3 3 3 2 Calcium-dependent channel, 7TM region, putative phosphate Sdh_cyt PF01127.22 ORF91069 - 0.027 14.5 0.3 4.8 7.2 0.1 2.7 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TMEM52 PF14979.6 ORF91069 - 0.13 12.2 4.1 3.4 7.6 4.7 2.4 2 0 0 2 2 2 0 Transmembrane 52 SlyX PF04102.12 ORF90920 - 0.019 15.6 1.2 0.019 15.6 1.2 2.3 3 0 0 3 3 3 0 SlyX FERM_M PF00373.18 ORF90920 - 0.12 12.7 0.2 0.2 12.1 0.2 1.3 1 0 0 1 1 1 0 FERM central domain Rootletin PF15035.6 ORF90920 - 0.55 10.2 4.9 0.064 13.3 0.7 1.6 2 0 0 2 2 2 0 Ciliary rootlet component, centrosome cohesion Csm1_N PF18504.1 ORF90920 - 0.84 10.0 4.3 2 8.8 4.3 1.6 1 0 0 1 1 1 0 Csm1 N-terminal domain Sec2p PF06428.11 ORF90920 - 1 9.4 6.1 0.55 10.2 3.8 1.7 2 0 0 2 2 2 0 GDP/GTP exchange factor Sec2p Glyco_hydro_16 PF00722.21 ORF88182 - 1.5e-14 53.8 0.0 2.3e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 SKN1 PF03935.15 ORF88182 - 0.0026 16.2 0.0 1.3 7.3 0.0 2.8 3 0 0 3 3 3 2 Beta-glucan synthesis-associated protein (SKN1) Helicase_C PF00271.31 ORF85850 - 3.5e-27 94.9 0.0 6.6e-27 94.1 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF85850 - 8.7e-05 22.4 0.0 0.0032 17.3 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase EF-hand_7 PF13499.6 ORF80384 - 5.8e-07 29.9 0.5 0.00021 21.7 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF80384 - 3.8e-06 26.0 0.0 0.0078 15.7 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF80384 - 4.9e-06 26.1 0.1 0.027 14.4 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF80384 - 0.00015 21.1 0.0 0.016 14.7 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF80384 - 0.064 13.1 0.0 2.2 8.2 0.0 2.6 2 0 0 2 2 2 0 EF-hand domain pair MFS_1 PF07690.16 ORF75102 - 3.1e-13 49.4 18.7 3.1e-13 49.4 18.7 2.7 2 1 0 2 2 2 1 Major Facilitator Superfamily Herpes_US9 PF06072.11 ORF75102 - 0.068 13.1 1.0 1.5 8.8 0.1 2.7 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 OATP PF03137.20 ORF75102 - 0.73 8.0 11.7 0.015 13.7 3.3 2.3 3 0 0 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family DUF3784 PF12650.7 ORF75102 - 1.1 9.5 0.0 1.1 9.5 0.0 3.9 3 1 2 5 5 5 0 Domain of unknown function (DUF3784) Chromadorea_ALT PF05535.12 ORF70611 - 0.02 15.1 0.9 0.056 13.6 0.9 1.7 1 0 0 1 1 1 0 Chromadorea ALT protein YiiD_C PF09500.10 ORF53540 - 4.4e-48 162.8 0.0 6.3e-48 162.3 0.0 1.2 1 0 0 1 1 1 1 Putative thioesterase (yiiD_Cterm) Acetyltransf_1 PF00583.25 ORF53540 - 1.1e-13 51.4 0.0 1.8e-13 50.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF53540 - 3.1e-13 49.8 0.0 5.3e-13 49.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF53540 - 9.9e-08 32.3 0.0 1.9e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_5 PF13444.6 ORF53540 - 6.3e-05 23.6 0.0 0.00012 22.8 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF53540 - 0.00088 19.2 0.0 0.0022 17.9 0.0 1.7 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF53540 - 0.0014 18.7 0.0 0.0028 17.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF4442 PF14539.6 ORF53540 - 0.0019 18.4 0.0 0.0033 17.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) ATE_C PF04377.15 ORF53540 - 0.038 14.6 0.0 0.069 13.8 0.0 1.3 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, C terminus GTP-bdg_N PF13167.6 ORF47520 - 0.052 14.2 0.4 0.12 13.1 0.4 1.6 1 0 0 1 1 1 0 GTP-binding GTPase N-terminal DUF1461 PF07314.11 ORF43100 - 0.37 10.7 1.0 0.75 9.7 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) Chromadorea_ALT PF05535.12 ORF4066 - 0.02 15.1 0.9 0.056 13.6 0.9 1.7 1 0 0 1 1 1 0 Chromadorea ALT protein H_PPase PF03030.16 ORF40203 - 6.7e-83 279.4 10.4 8e-83 279.2 10.4 1.1 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF40203 - 0.017 15.6 2.2 0.16 12.5 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) DUF3176 PF11374.8 ORF40203 - 0.14 12.4 2.1 10 6.4 1.7 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3176) YtpI PF14007.6 ORF40203 - 1.6 9.0 15.6 0.056 13.6 3.9 3.1 2 1 1 3 3 3 0 YtpI-like protein cNMP_binding PF00027.29 ORF3784 - 0.00023 21.2 0.0 0.00037 20.5 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Lig_chan PF00060.26 ORF3784 - 0.0047 16.8 2.5 0.0082 16.0 2.1 1.5 1 1 0 1 1 1 1 Ligand-gated ion channel NLRC4_HD PF17889.1 ORF3784 - 0.05 13.9 0.1 0.15 12.4 0.0 1.9 2 0 0 2 2 2 0 NLRC4 helical domain IZUMO PF15005.6 ORF3784 - 0.089 13.3 0.4 0.2 12.2 0.4 1.5 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated Chromadorea_ALT PF05535.12 ORF36950 - 0.02 15.1 0.9 0.056 13.6 0.9 1.7 1 0 0 1 1 1 0 Chromadorea ALT protein PdxA PF04166.12 ORF36522 - 4.8e-110 367.4 0.0 6e-110 367.1 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA ELO PF01151.18 ORF26666 - 5.9e-34 117.7 18.3 5.9e-34 117.7 18.3 1.4 2 0 0 2 2 2 1 GNS1/SUR4 family Chromadorea_ALT PF05535.12 ORF2532 - 0.02 15.1 0.9 0.056 13.6 0.9 1.7 1 0 0 1 1 1 0 Chromadorea ALT protein ZapB PF06005.12 ORF22199 - 0.041 14.3 2.1 0.041 14.3 2.1 4.7 4 2 0 4 4 4 0 Cell division protein ZapB Tho2 PF11262.8 ORF22199 - 0.69 9.1 31.5 1.1 8.4 2.8 3.3 2 2 1 3 3 3 0 Transcription factor/nuclear export subunit protein 2 Lipase_3 PF01764.25 ORF22024 - 1.4e-31 109.3 0.0 2.2e-31 108.6 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF22024 - 0.0047 16.2 0.0 0.0077 15.5 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Cutinase PF01083.22 ORF22024 - 0.01 15.8 0.4 0.032 14.2 0.4 1.8 1 1 0 1 1 1 0 Cutinase Abhydrolase_2 PF02230.16 ORF22024 - 0.071 12.9 0.0 0.47 10.2 0.0 2.1 1 1 0 2 2 2 0 Phospholipase/Carboxylesterase 2OG-FeII_Oxy_3 PF13640.6 ORF20001 - 2.1e-13 51.0 0.0 1.6e-09 38.5 0.0 2.2 2 0 0 2 2 2 2 2OG-Fe(II) oxygenase superfamily ddrB-ParB PF18763.1 ORF20001 - 0.086 13.0 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 ddrB-like ParB superfamily domain Ank_2 PF12796.7 ORF14068 - 2.2e-60 201.2 8.9 1.6e-17 63.9 0.2 5.3 2 1 2 5 5 5 5 Ankyrin repeats (3 copies) Ank PF00023.30 ORF14068 - 6.9e-55 181.2 9.4 0.0001 22.6 0.0 10.1 10 0 0 10 10 10 10 Ankyrin repeat Ank_3 PF13606.6 ORF14068 - 1.7e-46 150.8 0.7 5.1e-05 23.4 0.0 10.5 10 1 0 10 10 10 8 Ankyrin repeat Ank_4 PF13637.6 ORF14068 - 1.5e-45 153.0 4.8 7e-08 32.9 0.0 7.3 3 2 5 9 9 9 9 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF14068 - 1.8e-40 136.5 14.3 2.3e-07 31.0 0.2 8.0 2 1 6 8 8 8 8 Ankyrin repeats (many copies) Nepo_coat_C PF03688.14 ORF14068 - 5.1e-05 23.2 0.2 0.0039 17.0 0.1 3.1 2 2 1 3 3 3 1 Nepovirus coat protein, C-terminal domain DUF4205 PF13898.6 ORF14068 - 0.0021 17.1 0.4 1.3 7.9 0.0 2.7 3 0 0 3 3 3 2 Domain of unknown function (DUF4205) GST_C_2 PF13410.6 ORF11250 - 5.1e-12 45.6 0.6 1.3e-11 44.3 0.6 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF11250 - 6.3e-08 32.8 0.0 2e-07 31.2 0.0 1.9 2 1 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF11250 - 3.2e-06 27.2 0.0 6.2e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF11250 - 0.006 16.8 0.0 0.0098 16.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF11250 - 0.067 13.8 0.0 0.12 13.0 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF11250 - 0.078 13.4 0.0 2.3 8.7 0.0 2.4 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 ORF11250 - 0.19 12.0 0.0 0.49 10.7 0.0 1.7 1 0 0 1 1 1 0 Glutaredoxin UQ_con PF00179.26 ORF111232 - 2.4e-14 53.2 0.0 4e-14 52.4 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Imm40 PF15569.6 ORF107674 - 0.035 14.2 0.4 0.34 11.0 0.1 2.4 2 0 0 2 2 2 0 Immunity protein 40 DNA_circ_N PF07157.12 ORF107674 - 0.13 12.6 0.0 0.26 11.7 0.0 1.4 1 0 0 1 1 1 0 DNA circularisation protein N-terminus p450 PF00067.22 ORF105258 - 0.0034 16.2 1.7 0.0099 14.7 1.7 2.0 1 1 0 1 1 1 1 Cytochrome P450 JIP_LZII PF16471.5 ORF102866 - 0.034 14.3 0.4 0.034 14.3 0.4 2.4 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II APG5 PF04106.12 ORF102866 - 0.073 12.6 1.0 0.13 11.8 1.0 1.4 1 0 0 1 1 1 0 Autophagy protein Apg5 NTS_2 PF15448.6 ORF102866 - 0.23 11.9 2.6 0.76 10.2 0.2 2.8 3 0 0 3 3 3 0 N-terminal segments of P. falciparum erythrocyte membrane protein RNA_pol_L PF01193.24 ORF100869 - 2.5e-24 84.5 0.0 4.1e-24 83.8 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_A_CTD PF03118.15 ORF100869 - 4.5e-24 84.0 0.1 8e-24 83.2 0.1 1.4 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain RNA_pol_A_bac PF01000.26 ORF100869 - 7.8e-24 84.2 0.2 1.8e-23 83.0 0.1 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L_2 PF13656.6 ORF100869 - 0.00011 21.8 0.0 0.61 9.9 0.0 2.7 2 0 0 2 2 2 2 RNA polymerase Rpb3/Rpb11 dimerisation domain YjbH PF06082.11 ORF100869 - 0.25 10.1 0.1 0.37 9.5 0.1 1.2 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH DUF2931 PF11153.8 NODE_19880_length_985_cov_337.809474_g15227_i0forward_frame_3 - 0.17 11.6 0.1 0.23 11.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) FHA PF00498.26 NODE_19818_length_987_cov_386.400210_g12746_i1reverse_frame_3 - 1.7e-18 66.8 0.1 7.2e-09 35.9 0.0 2.6 2 0 0 2 2 2 2 FHA domain Yop-YscD_cpl PF16697.5 NODE_19818_length_987_cov_386.400210_g12746_i1reverse_frame_3 - 1.8e-09 37.8 0.0 2.1e-05 24.8 0.0 3.0 3 0 0 3 3 3 2 Inner membrane component of T3SS, cytoplasmic domain PSI PF01437.25 ORF96641 - 2.5e-07 31.1 62.0 0.00046 20.7 6.6 5.2 4 1 1 5 5 5 4 Plexin repeat Apq12 PF12716.7 ORF96641 - 0.17 11.9 2.6 0.24 11.4 2.6 1.2 1 0 0 1 1 1 0 Nuclear pore assembly and biogenesis PSI_integrin PF17205.3 ORF96641 - 6.1 6.7 54.9 0.038 13.7 6.8 5.2 5 1 0 5 5 5 0 Integrin plexin domain Varsurf_PPLC PF03490.13 ORF966 - 0.035 14.1 0.1 0.078 12.9 0.1 1.5 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C GRIP PF01465.20 ORF96074 - 1.1e-09 38.0 0.4 3.4e-09 36.5 0.0 2.0 2 0 0 2 2 2 1 GRIP domain SlyX PF04102.12 ORF96074 - 0.0024 18.5 5.8 0.0024 18.5 5.8 4.9 3 2 1 4 4 4 1 SlyX DUF4407 PF14362.6 ORF96074 - 0.03 13.7 34.6 0.17 11.2 23.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF96074 - 0.13 11.7 40.5 0.31 10.4 13.4 3.1 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding bMG10 PF17973.1 ORF96074 - 0.15 12.2 0.2 0.15 12.2 0.2 1.7 2 0 0 2 2 2 0 Bacterial Alpha-2-macroglobulin MG10 domain DivIC PF04977.15 ORF96074 - 0.28 11.0 38.2 0.13 12.0 4.9 4.2 3 1 1 4 4 4 0 Septum formation initiator Filament PF00038.21 ORF96074 - 0.4 10.2 42.4 1.1 8.7 14.8 3.3 2 1 1 3 3 3 0 Intermediate filament protein Fez1 PF06818.15 ORF96074 - 0.72 10.3 35.3 0.2 12.1 17.4 2.3 1 1 1 2 2 2 0 Fez1 ATP-synt_E_2 PF08112.11 ORF96074 - 1.1 9.6 5.9 0.2 12.0 0.5 2.6 3 0 0 3 3 2 0 ATP synthase epsilon subunit DUF3584 PF12128.8 ORF96074 - 1.9 5.9 36.5 19 2.6 36.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) MAD PF05557.13 ORF96074 - 2 6.7 40.4 1.9 6.7 5.4 2.1 2 0 0 2 2 2 0 Mitotic checkpoint protein Prefoldin_2 PF01920.20 ORF96074 - 4.3 7.3 31.9 0.18 11.8 2.4 4.4 2 1 2 4 4 4 0 Prefoldin subunit CALCOCO1 PF07888.11 ORF96074 - 9.2 5.0 42.2 3.2 6.5 4.6 2.4 2 1 0 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like PAP2_C PF14360.6 ORF92168 - 1.9e-17 63.5 7.0 1.9e-17 63.5 7.0 1.9 2 0 0 2 2 2 1 PAP2 superfamily C-terminal PAP2 PF01569.21 ORF92168 - 1.9e-08 34.1 2.3 1.9e-08 34.1 2.3 2.1 1 1 1 2 2 2 1 PAP2 superfamily DUF4386 PF14329.6 ORF92168 - 0.045 13.6 6.1 0.047 13.6 1.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4386) PAP2_3 PF14378.6 ORF92168 - 2.3 7.8 14.8 4.8 6.8 14.8 1.5 1 1 0 1 1 1 0 PAP2 superfamily zf-RING_2 PF13639.6 ORF88139 - 2.2e-10 40.7 4.6 4e-10 39.9 4.6 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF88139 - 1.6e-08 34.2 2.4 1.6e-08 34.2 2.4 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF88139 - 1.8e-06 27.7 3.2 3.6e-06 26.7 3.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF88139 - 9.6e-05 22.6 7.4 0.00035 20.8 7.4 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain 7tm_1 PF00001.21 ORF88139 - 0.00055 19.3 1.5 0.00077 18.9 1.5 1.3 1 0 0 1 1 1 1 7 transmembrane receptor (rhodopsin family) Zn_ribbon_17 PF17120.5 ORF88139 - 0.0011 18.5 2.3 0.0023 17.5 2.3 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type DUF4064 PF13273.6 ORF88139 - 0.0011 19.2 2.3 0.0011 19.2 2.3 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) zf-C3HC4 PF00097.25 ORF88139 - 0.0017 18.2 3.8 0.0045 16.8 3.8 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) IRK PF01007.20 ORF88139 - 0.0032 17.3 7.5 0.0076 16.1 7.5 1.5 1 0 0 1 1 1 1 Inward rectifier potassium channel transmembrane domain zf-RING_5 PF14634.6 ORF88139 - 0.0036 17.2 3.0 0.0072 16.3 3.0 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF88139 - 0.0073 16.3 0.5 0.015 15.3 0.5 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger DUF2189 PF09955.9 ORF88139 - 0.0088 16.3 0.8 0.018 15.3 0.8 1.6 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2189) DUF2975 PF11188.8 ORF88139 - 0.011 15.6 8.2 0.021 14.7 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) zf-C3HC4_3 PF13920.6 ORF88139 - 0.013 15.3 2.4 0.026 14.4 2.4 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3H2C3 PF17122.5 ORF88139 - 0.023 14.7 0.9 0.06 13.4 0.9 1.7 1 0 0 1 1 1 0 Zinc-finger Prok-RING_4 PF14447.6 ORF88139 - 0.026 14.4 4.1 0.057 13.3 4.1 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 DUF2873 PF11395.8 ORF88139 - 0.058 13.2 0.3 0.058 13.2 0.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) zf-RING_UBOX PF13445.6 ORF88139 - 0.069 13.2 0.9 0.069 13.2 0.9 2.4 2 0 0 2 2 2 0 RING-type zinc-finger MSC PF09402.10 ORF88139 - 0.32 10.4 1.8 2.1 7.7 1.7 2.1 1 1 0 1 1 1 0 Man1-Src1p-C-terminal domain DUF3671 PF12420.8 ORF88139 - 0.33 11.0 4.3 0.95 9.6 4.2 1.8 1 1 0 1 1 1 0 Protein of unknown function zf-P11 PF03854.14 ORF88139 - 1 9.1 4.9 3.7 7.3 4.9 2.0 1 1 0 1 1 1 0 P-11 zinc finger RDD PF06271.12 ORF88139 - 2 8.6 8.0 4.1 7.6 8.0 1.4 1 0 0 1 1 1 0 RDD family Prok-RING_1 PF14446.6 ORF88139 - 3 7.8 5.4 1.9 8.5 2.4 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 DHHC PF01529.20 ORF88139 - 8.2 6.5 12.8 6.9 6.8 0.7 2.1 1 1 1 2 2 2 0 DHHC palmitoyltransferase Clathrin PF00637.20 ORF85966 - 6.1e-35 120.2 8.4 4.2e-28 98.0 4.0 2.2 2 0 0 2 2 2 2 Region in Clathrin and VPS Csm1_B PF18211.1 ORF85966 - 0.11 12.3 0.6 0.3 10.9 0.2 2.0 2 0 0 2 2 2 0 Csm1 subunit domain B DASH_Dad4 PF08650.10 ORF85966 - 0.14 12.2 1.9 0.4 10.7 1.9 1.7 1 0 0 1 1 1 0 DASH complex subunit Dad4 Bax1-I PF01027.20 ORF80375 - 2.3e-34 119.1 35.0 2.7e-34 118.8 35.0 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF80375 - 6.5e-08 32.4 3.9 7.5e-08 32.2 3.9 1.1 1 0 0 1 1 1 1 Bax inhibitor 1 like DUF2070 PF09843.9 ORF80375 - 1.3 7.2 23.5 1.8 6.8 23.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4191 PF13829.6 ORF80375 - 3.6 6.9 11.5 0.79 9.0 5.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) TRAP-gamma PF07074.12 ORF80375 - 8.1 6.0 11.1 0.42 10.1 4.1 2.2 1 1 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Pectate_lyase_3 PF12708.7 ORF7859 - 0.021 14.6 0.5 0.13 12.0 0.3 2.0 1 1 0 2 2 2 0 Pectate lyase superfamily protein LpxK PF02606.14 ORF76234 - 7e-112 373.7 0.0 8.6e-112 373.4 0.0 1.0 1 0 0 1 1 1 1 Tetraacyldisaccharide-1-P 4'-kinase MobB PF03205.14 ORF76234 - 0.0078 16.1 0.0 0.03 14.2 0.0 2.0 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Glyco_transf_4 PF13439.6 ORF76234 - 0.0087 16.1 0.1 0.016 15.2 0.1 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 AAA_26 PF13500.6 ORF76234 - 0.012 15.4 0.1 0.031 14.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain CbiA PF01656.23 ORF76234 - 0.11 12.5 0.0 0.23 11.5 0.0 1.5 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain NAD_binding_2 PF03446.15 ORF75311 - 7.6e-25 87.9 0.1 1.3e-24 87.1 0.1 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF75311 - 1.8e-15 57.3 0.1 4.3e-15 56.0 0.1 1.6 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 ORF75311 - 5.2e-08 33.4 1.1 1.4e-07 32.0 1.0 1.8 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 ORF75311 - 8.2e-05 22.0 0.1 0.00014 21.3 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 ORF75311 - 0.00063 19.3 0.1 0.0013 18.3 0.1 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 ORF75311 - 0.0017 18.4 0.1 0.003 17.6 0.1 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Rossmann-like PF10727.9 ORF75311 - 0.0027 17.6 1.7 0.0054 16.6 1.7 1.4 1 0 0 1 1 1 1 Rossmann-like domain TrkA_N PF02254.18 ORF75311 - 0.0029 17.8 0.2 0.0069 16.6 0.2 1.7 1 1 0 1 1 1 1 TrkA-N domain Sacchrp_dh_NADP PF03435.18 ORF75311 - 0.05 13.9 0.1 0.092 13.0 0.1 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Phage_holin_3_6 PF07332.11 ORF70118 - 0.087 12.9 0.1 0.087 12.9 0.1 2.3 2 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III TPR_2 PF07719.17 ORF68058 - 0.00042 20.2 0.2 0.36 11.1 0.1 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF68058 - 0.41 11.6 3.9 3.5 8.7 0.3 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF68058 - 2.7 8.8 6.4 5.1 8.0 0.0 3.4 4 0 0 4 4 4 0 Tetratricopeptide repeat Endonuclease_5 PF04493.14 ORF6773 - 6e-54 182.7 0.0 8.4e-54 182.3 0.0 1.1 1 0 0 1 1 1 1 Endonuclease V UvrC_HhH_N PF08459.11 ORF6773 - 0.0015 18.4 0.0 0.0025 17.7 0.0 1.3 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal DUF99 PF01949.16 ORF6773 - 0.0071 15.8 1.1 0.1 12.0 0.0 2.7 4 0 0 4 4 4 1 Protein of unknown function DUF99 PP2C PF00481.21 ORF6497 - 3.7e-71 239.8 0.1 2.4e-69 233.9 0.1 2.0 1 1 0 1 1 1 1 Protein phosphatase 2C Crp PF00325.20 ORF6497 - 0.015 14.9 0.1 9.5 6.0 0.2 3.2 3 0 0 3 3 3 0 Bacterial regulatory proteins, crp family KH_1 PF00013.29 ORF60303 - 4.1e-14 52.1 0.1 6.1e-14 51.6 0.1 1.3 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF60303 - 0.0023 17.7 0.2 0.0033 17.2 0.2 1.2 1 0 0 1 1 1 1 KH domain KH_4 PF13083.6 ORF60303 - 0.22 11.4 0.0 0.47 10.4 0.0 1.5 1 0 0 1 1 1 0 KH domain CsgF PF10614.9 ORF5560 - 0.47 10.7 1.0 0.72 10.1 0.3 1.6 2 0 0 2 2 2 0 Type VIII secretion system (T8SS), CsgF protein 2OG-FeII_Oxy PF03171.20 ORF54297 - 0.021 15.3 0.0 0.041 14.4 0.0 1.5 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily NAD_binding_2 PF03446.15 ORF47735 - 7.6e-25 87.9 0.1 1.3e-24 87.1 0.1 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF47735 - 1.8e-15 57.3 0.1 4.3e-15 56.0 0.1 1.6 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 ORF47735 - 5.2e-08 33.4 1.1 1.4e-07 32.0 1.0 1.8 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 ORF47735 - 8.2e-05 22.0 0.1 0.00014 21.3 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 ORF47735 - 0.00063 19.3 0.1 0.0013 18.3 0.1 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 ORF47735 - 0.0017 18.4 0.1 0.003 17.6 0.1 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Rossmann-like PF10727.9 ORF47735 - 0.0027 17.6 1.7 0.0054 16.6 1.7 1.4 1 0 0 1 1 1 1 Rossmann-like domain TrkA_N PF02254.18 ORF47735 - 0.0029 17.8 0.2 0.0069 16.6 0.2 1.7 1 1 0 1 1 1 1 TrkA-N domain Sacchrp_dh_NADP PF03435.18 ORF47735 - 0.05 13.9 0.1 0.092 13.0 0.1 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Varsurf_PPLC PF03490.13 ORF4586 - 0.035 14.1 0.1 0.078 12.9 0.1 1.5 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C Apolipoprotein PF01442.18 ORF4410 - 0.15 11.9 3.1 2.3 8.0 0.3 2.1 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Z1 PF10593.9 ORF4410 - 1.9 7.9 9.0 0.8 9.2 4.0 2.1 2 0 0 2 2 2 0 Z1 domain DUF4586 PF15239.6 ORF41671 - 5e-31 109.0 22.0 6.5e-31 108.6 22.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4586) YqfQ PF14181.6 ORF40452 - 0.026 14.8 0.1 0.048 13.9 0.1 1.4 1 0 0 1 1 1 0 YqfQ-like protein Peptidase_C26 PF07722.13 ORF39268 - 8.2e-20 71.5 0.0 3.7e-19 69.3 0.0 2.0 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF39268 - 6.6e-09 35.8 0.0 2.1e-08 34.2 0.0 1.8 2 1 0 2 2 2 1 Glutamine amidotransferase class-I PPV_E2_N PF00508.17 ORF39268 - 0.026 13.9 0.6 0.053 12.9 0.6 1.5 1 0 0 1 1 1 0 E2 (early) protein, N terminal FH2 PF02181.23 ORF34609 - 3.1e-14 52.9 0.0 4.4e-14 52.4 0.0 1.2 1 0 0 1 1 1 1 Formin Homology 2 Domain Aconitase_C PF00694.19 ORF33817 - 6.9e-52 175.2 0.0 1.2e-51 174.4 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain YtpI PF14007.6 ORF31320 - 0.039 14.1 1.5 0.14 12.3 1.5 1.9 1 0 0 1 1 1 0 YtpI-like protein TMEM72 PF16054.5 ORF31320 - 1.9 8.1 5.9 4 7.1 5.9 1.5 1 0 0 1 1 1 0 Transmembrane protein family 72 PPR_3 PF13812.6 ORF27428 - 2.4e-10 40.4 0.0 3.9e-05 23.6 0.0 3.5 2 1 2 4 4 4 4 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF27428 - 0.00023 21.3 0.0 0.091 13.0 0.0 2.7 2 0 0 2 2 2 2 PPR repeat family PPR_long PF17177.4 ORF27428 - 0.014 14.8 0.0 0.031 13.7 0.0 1.5 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF27428 - 0.089 12.5 0.1 0.2 11.4 0.1 1.7 1 0 0 1 1 1 0 PPR repeat TPR_14 PF13428.6 ORF27428 - 0.32 11.9 3.3 0.68 10.9 0.2 2.9 1 1 2 3 3 3 0 Tetratricopeptide repeat DUF2975 PF11188.8 ORF22455 - 7.5 6.5 13.7 1.4 8.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2975) DUF2475 PF10629.9 ORF20899 - 2.2e-07 30.9 0.2 0.091 13.0 0.0 3.5 3 0 0 3 3 3 2 Protein of unknown function (DUF2475) GDA1_CD39 PF01150.17 ORF17311 - 9.2e-28 97.0 0.0 1e-26 93.6 0.0 2.0 1 1 0 1 1 1 1 GDA1/CD39 (nucleoside phosphatase) family Ipi1_N PF12333.8 ORF17311 - 0.062 13.9 0.0 1.3 9.7 0.0 2.2 2 0 0 2 2 2 0 Rix1 complex component involved in 60S ribosome maturation PP2C PF00481.21 ORF16226 - 3.7e-71 239.8 0.1 2.4e-69 233.9 0.1 2.0 1 1 0 1 1 1 1 Protein phosphatase 2C Crp PF00325.20 ORF16226 - 0.015 14.9 0.1 9.5 6.0 0.2 3.2 3 0 0 3 3 3 0 Bacterial regulatory proteins, crp family DUF179 PF02622.15 ORF15717 - 2.5e-07 30.8 0.0 6.1e-07 29.5 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized ACR, COG1678 PTH2 PF01981.16 ORF15717 - 0.012 15.8 0.0 0.019 15.2 0.0 1.3 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase PTH2 PARG_cat PF05028.14 ORF14327 - 8.7e-81 271.8 0.0 1.1e-80 271.5 0.0 1.0 1 0 0 1 1 1 1 Poly (ADP-ribose) glycohydrolase (PARG) AKAP_110 PF05716.13 ORF14327 - 0.11 10.7 0.0 0.15 10.2 0.0 1.1 1 0 0 1 1 1 0 A-kinase anchor protein 110 kDa (AKAP 110) MMR_HSR1 PF01926.23 ORF108417 - 6.9e-08 32.6 0.0 1.9e-07 31.1 0.0 1.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF108417 - 0.013 15.1 0.0 2.5 7.6 0.0 2.4 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain Bax1-I PF01027.20 ORF108158 - 2.3e-34 119.1 35.0 2.7e-34 118.8 35.0 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF108158 - 6.5e-08 32.4 3.9 7.5e-08 32.2 3.9 1.1 1 0 0 1 1 1 1 Bax inhibitor 1 like DUF2070 PF09843.9 ORF108158 - 1.3 7.2 23.5 1.8 6.8 23.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4191 PF13829.6 ORF108158 - 3.6 6.9 11.5 0.79 9.0 5.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) TRAP-gamma PF07074.12 ORF108158 - 8.1 6.0 11.1 0.42 10.1 4.1 2.2 1 1 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) PP2C PF00481.21 ORF106375 - 3.7e-71 239.8 0.1 2.4e-69 233.9 0.1 2.0 1 1 0 1 1 1 1 Protein phosphatase 2C Crp PF00325.20 ORF106375 - 0.015 14.9 0.1 9.5 6.0 0.2 3.2 3 0 0 3 3 3 0 Bacterial regulatory proteins, crp family Varsurf_PPLC PF03490.13 ORF102625 - 0.035 14.1 0.1 0.078 12.9 0.1 1.5 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C MutS_I PF01624.20 NODE_19982_length_982_cov_118.891235_g15314_i0reverse_frame_3 - 2.9e-16 59.7 1.0 6.4e-16 58.6 0.2 2.0 2 0 0 2 2 2 1 MutS domain I zf-RING_4 PF14570.6 NODE_19915_length_984_cov_170.730242_g15257_i0forward_frame_2 - 0.037 13.8 5.9 0.081 12.7 4.6 2.3 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks43.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks43.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks43.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks43.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:12:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_C1 PF00112.23 ORF99626 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF99626 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF99626 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Glyco_tranf_2_3 PF13641.6 ORF99318 - 0.0012 18.8 0.2 0.0019 18.1 0.2 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 ORF99318 - 0.0039 17.0 0.4 0.0069 16.2 0.4 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 2 HAD_SAK_2 PF18143.1 ORF99318 - 0.0079 16.5 1.1 0.014 15.7 1.1 1.4 1 0 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins Tugs PF17840.1 ORF99318 - 0.045 13.9 0.1 0.24 11.6 0.1 2.2 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain VraX PF17412.2 ORF99168 - 0.016 14.8 0.0 5.9 6.6 0.0 3.2 3 0 0 3 3 3 0 Family of unknown function Calpain_III PF01067.22 ORF99168 - 0.026 14.8 0.0 0.058 13.6 0.0 1.6 1 0 0 1 1 1 0 Calpain large subunit, domain III Fz PF01392.22 ORF97879 - 0.53 10.9 4.1 12 6.6 4.1 2.2 1 1 0 1 1 1 0 Fz domain Peptidase_C1 PF00112.23 ORF94220 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF94220 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF94220 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF93778 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF93778 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF93778 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF84923 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF84923 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF84923 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family TMEM234 PF10639.9 ORF84611 - 0.0019 18.2 2.0 0.0054 16.8 2.0 1.8 1 0 0 1 1 1 1 Putative transmembrane family 234 Peptidase_C1 PF00112.23 ORF83924 - 6.8e-57 193.0 11.6 1.1e-56 192.3 11.6 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF83924 - 8.4e-17 61.4 7.2 1.7e-16 60.4 7.2 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) DDHD PF02862.17 ORF82295 - 0.12 12.5 3.8 0.15 12.2 3.8 1.2 1 0 0 1 1 1 0 DDHD domain T2SSK PF03934.13 ORF75581 - 1.9e-66 224.3 3.4 2.3e-66 224.1 3.4 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein K Helicase_C PF00271.31 ORF74930 - 2e-17 63.5 0.1 3.1e-17 62.9 0.1 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain MotA_ExbB PF01618.16 ORF74256 - 0.045 13.5 0.0 0.096 12.4 0.0 1.5 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family GvpG PF05120.12 ORF74256 - 0.085 12.9 0.6 0.19 11.8 0.6 1.6 1 0 0 1 1 1 0 Gas vesicle protein G DUF1501 PF07394.12 ORF65125 - 5.7e-28 98.1 1.3 7.2e-28 97.7 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1501) Peptidase_C1 PF00112.23 ORF65095 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF65095 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF65095 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family HECT PF00632.25 ORF60925 - 8.1e-56 189.7 0.1 9.7e-56 189.5 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Peptidase_C1 PF00112.23 ORF58220 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF58220 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF58220 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family FDF PF09532.10 ORF53450 - 1.6e-09 38.6 3.4 0.00011 23.0 0.0 2.6 1 1 1 2 2 2 2 FDF domain PDR_CDR PF06422.12 ORF48950 - 6.1 6.8 7.0 19 5.2 0.2 2.9 2 0 0 2 2 2 0 CDR ABC transporter Peptidase_C1 PF00112.23 ORF4836 - 7.7e-57 192.9 9.5 7.7e-57 192.9 9.5 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF4836 - 1.6e-14 54.0 3.0 3.6e-14 52.9 3.0 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF4836 - 1.3e-06 27.5 1.5 0.0028 16.5 0.6 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Propeptide_C1 PF08127.13 ORF4836 - 0.069 13.1 0.1 0.23 11.4 0.0 1.8 2 0 0 2 2 2 0 Peptidase family C1 propeptide Kelch_1 PF01344.25 ORF48274 - 1.1e-58 194.5 0.0 2.9e-12 46.0 0.0 7.5 7 1 0 7 7 7 7 Kelch motif Kelch_6 PF13964.6 ORF48274 - 7e-36 121.4 0.0 3.8e-07 30.1 0.0 7.4 2 2 5 7 7 7 6 Kelch motif Kelch_2 PF07646.15 ORF48274 - 1.5e-28 97.6 0.1 5.2e-06 26.2 0.0 6.8 7 1 0 7 7 7 6 Kelch motif Kelch_3 PF13415.6 ORF48274 - 8.9e-27 92.8 2.7 0.00013 22.1 0.0 7.3 7 0 0 7 7 7 6 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF48274 - 3.6e-11 42.9 0.0 0.12 12.4 0.0 6.1 6 1 1 7 7 7 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF48274 - 1.5e-08 34.5 0.0 2.9 8.0 0.0 5.4 5 0 0 5 5 5 3 Kelch motif NiFeSe_Hases PF00374.19 ORF47824 - 4.7e-106 355.7 0.0 5.2e-106 355.5 0.0 1.0 1 0 0 1 1 1 1 Nickel-dependent hydrogenase Glyco_hydro_38C PF07748.13 ORF47774 - 3.3e-16 60.0 0.0 6.5e-16 59.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Tantalus PF15386.6 ORF47774 - 0.14 12.3 3.3 0.65 10.1 0.2 2.6 2 0 0 2 2 2 0 Drosophila Tantalus-like 5-FTHF_cyc-lig PF01812.20 ORF45290 - 1.1e-27 97.1 0.0 1.7e-27 96.5 0.0 1.3 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Ank_2 PF12796.7 ORF45231 - 3e-10 40.6 0.1 5.8e-05 23.6 0.0 3.5 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF45231 - 6.3e-09 35.9 0.5 0.00016 21.9 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 ORF45231 - 9.3e-08 31.8 0.2 0.0025 18.1 0.0 4.6 4 0 0 4 4 4 1 Ankyrin repeat Ank_4 PF13637.6 ORF45231 - 1.2e-07 32.1 0.0 0.00027 21.5 0.0 3.4 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF45231 - 0.0022 18.3 0.6 0.16 12.3 0.0 3.3 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Peptidase_U32 PF01136.19 ORF42716 - 8.9e-13 47.9 0.0 1.3e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase family U32 Peptidase_C1 PF00112.23 ORF41589 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF41589 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF41589 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family AAA_lid_2 PF17863.1 ORF37913 - 7.8e-19 67.3 0.0 1.3e-18 66.6 0.0 1.3 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 ORF37913 - 1.3e-10 41.0 0.0 2.3e-07 30.4 0.0 2.2 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 ORF37913 - 2.2e-06 27.7 0.0 0.0048 16.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MCM PF00493.23 ORF37913 - 1.3e-05 24.5 0.0 0.0012 18.0 0.0 2.7 2 1 0 2 2 2 1 MCM P-loop domain AAA_22 PF13401.6 ORF37913 - 0.00015 22.1 0.0 0.0012 19.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF37913 - 0.00049 19.8 0.0 0.21 11.3 0.0 2.2 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_16 PF13191.6 ORF37913 - 0.00093 19.6 0.0 0.003 17.9 0.0 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 ORF37913 - 0.0011 19.4 0.0 0.016 15.6 0.0 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 ORF37913 - 0.021 15.3 0.0 0.52 10.8 0.0 2.2 2 0 0 2 2 2 0 ABC transporter AAA_30 PF13604.6 ORF37913 - 0.023 14.4 0.1 0.32 10.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 ORF37913 - 0.024 15.2 0.0 0.088 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 ORF37913 - 0.025 14.9 0.0 0.33 11.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 ORF37913 - 0.028 14.2 0.0 0.066 13.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 ORF37913 - 0.039 14.2 0.0 0.17 12.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 ORF37913 - 0.077 12.2 0.0 0.19 10.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 ORF37913 - 0.083 12.4 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region Peptidase_S28 PF05577.12 ORF3537 - 9.9e-07 27.9 0.1 2e-06 26.9 0.1 1.5 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peripla_BP_3 PF13377.6 ORF32960 - 1.7e-40 139.1 0.0 2.6e-40 138.4 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF32960 - 1.5e-33 116.5 0.0 1.8e-33 116.2 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 ORF32960 - 2.2e-20 72.2 0.8 3.7e-20 71.4 0.8 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 ORF32960 - 2e-18 66.9 0.0 3e-18 66.3 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_3 PF01381.22 ORF32960 - 0.074 13.1 0.0 0.2 11.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_Tnp_ISL3 PF13542.6 ORF32960 - 0.11 11.9 0.1 0.21 11.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_31 PF13560.6 ORF32960 - 0.11 12.8 0.0 0.23 11.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_35 PF13693.6 ORF32960 - 0.12 12.5 0.1 0.39 10.8 0.0 1.8 1 1 1 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 ORF32960 - 0.17 11.7 0.0 0.99 9.2 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Phage_CI_repr PF07022.13 ORF32960 - 0.18 12.0 0.0 0.53 10.4 0.0 1.8 2 0 0 2 2 2 0 Bacteriophage CI repressor helix-turn-helix domain MYO10_CC PF16735.5 ORF32960 - 0.91 9.7 3.3 0.48 10.6 0.6 1.9 2 0 0 2 2 2 0 Unconventional myosin-X coiled coil domain THF_DHG_CYH_C PF02882.19 ORF31450 - 2.8e-44 150.3 0.7 2.8e-44 150.3 0.7 2.3 3 1 0 3 3 3 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF1884 PF08967.10 ORF28444 - 0.034 14.4 0.7 1.1 9.5 0.1 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1884) FDF PF09532.10 ORF28271 - 1.6e-09 38.6 3.4 0.00011 23.0 0.0 2.6 1 1 1 2 2 2 2 FDF domain p450 PF00067.22 ORF26083 - 4.3e-66 223.6 0.0 4.9e-66 223.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Endonuclease_5 PF04493.14 ORF25790 - 2.3e-64 216.7 0.0 4e-64 215.9 0.0 1.4 2 0 0 2 2 2 1 Endonuclease V DUF99 PF01949.16 ORF25790 - 0.0035 16.8 0.0 0.0061 16.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF99 DUF5093 PF17011.5 ORF25790 - 0.046 14.0 1.3 0.046 14.0 1.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5093) DUF755 PF05501.11 ORF25790 - 4.1 7.7 10.7 0.86 9.9 3.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF755) Peptidase_C1 PF00112.23 ORF25055 - 8.2e-61 205.9 10.5 1.3e-60 205.2 10.5 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF25055 - 1.3e-14 54.3 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF25055 - 0.14 10.9 1.6 2.5 6.8 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF20093 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF20093 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF20093 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family CTNNBL PF08216.11 ORF19125 - 0.068 13.4 2.1 0.19 11.9 0.4 2.4 2 1 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear DUF1884 PF08967.10 ORF17216 - 0.034 14.4 0.7 1.1 9.5 0.1 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1884) Peptidase_C1 PF00112.23 ORF16094 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF16094 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF16094 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Anoctamin PF04547.12 ORF15668 - 1.1e-65 222.3 2.7 1.2e-65 222.1 2.7 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel Lipase_GDSL_3 PF14606.6 ORF13716 - 0.11 12.6 0.5 0.25 11.4 0.5 1.5 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family FGF PF00167.18 ORF13637 - 0.0047 17.0 0.1 0.085 13.0 0.0 2.2 1 1 1 2 2 2 2 Fibroblast growth factor Cyt-b5 PF00173.28 ORF1259 - 1.2e-15 57.4 0.1 2.6e-15 56.3 0.1 1.6 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain NDUF_B8 PF05821.11 ORF1259 - 0.06 13.2 1.1 0.8 9.5 0.3 2.5 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) MerR PF00376.23 ORF1259 - 0.32 10.8 2.0 3.4 7.5 0.1 2.4 2 0 0 2 2 2 0 MerR family regulatory protein Peptidase_C1 PF00112.23 ORF113 - 8.2e-61 205.9 10.5 1.3e-60 205.2 10.5 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF113 - 1.3e-14 54.3 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF113 - 0.14 10.9 1.6 2.5 6.8 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Pkinase PF00069.25 ORF109779 - 1.1e-56 192.1 0.4 1.3e-56 191.9 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF109779 - 4.7e-27 94.9 0.0 8.1e-27 94.1 0.0 1.3 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF109779 - 3.7e-06 26.5 0.0 5.6e-05 22.6 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF109779 - 4e-05 23.1 0.2 6.7e-05 22.3 0.2 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF109779 - 0.00042 19.4 0.2 0.00042 19.4 0.2 2.1 2 0 0 2 2 2 1 Haspin like kinase domain FTA2 PF13095.6 ORF109779 - 0.011 15.4 0.0 0.74 9.4 0.0 2.4 1 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 RabGAP-TBC PF00566.18 ORF108396 - 3.5e-59 200.1 0.3 4.9e-59 199.6 0.3 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Flg_hook PF02120.16 ORF108396 - 0.35 10.8 2.5 0.42 10.5 0.2 2.2 2 0 0 2 2 2 0 Flagellar hook-length control protein FliK FA_desaturase PF00487.24 ORF105428 - 3.8e-23 82.6 11.5 5e-23 82.2 11.5 1.1 1 0 0 1 1 1 1 Fatty acid desaturase ThrE PF06738.12 ORF105428 - 0.17 11.3 0.8 0.63 9.4 0.1 2.2 3 0 0 3 3 3 0 Putative threonine/serine exporter Glyco_hydro_38C PF07748.13 ORF103388 - 3.3e-16 60.0 0.0 6.5e-16 59.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Tantalus PF15386.6 ORF103388 - 0.14 12.3 3.3 0.65 10.1 0.2 2.6 2 0 0 2 2 2 0 Drosophila Tantalus-like Ureide_permease PF07168.11 ORF100173 - 0.77 8.5 2.0 9.4 4.9 0.1 2.2 2 0 0 2 2 2 0 Ureide permease MFS18 PF17352.2 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_1 - 0.019 15.4 2.1 0.036 14.5 2.1 1.5 1 0 0 1 1 1 0 Male Flower Specific protein 18 RCC1_2 PF13540.6 NODE_20104_length_978_cov_139.328738_g8584_i1forward_frame_1 - 3.5e-10 39.4 20.5 0.87 9.5 0.3 8.3 8 0 0 8 8 8 7 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_20104_length_978_cov_139.328738_g8584_i1forward_frame_1 - 0.00037 20.6 6.5 2.9 7.9 0.0 6.1 6 1 0 6 6 6 1 Uncharacterised ACR, YagE family COG1723 DUF3626 PF12294.8 ORF99548 - 2.1e-110 368.5 0.0 2.4e-110 368.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3626) Pkinase PF00069.25 ORF98628 - 3.2e-69 233.2 0.0 3.7e-69 233.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF98628 - 5.2e-41 140.6 0.0 6.4e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF98628 - 0.00013 21.4 0.1 0.0003 20.2 0.0 1.6 2 0 0 2 2 2 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF98628 - 0.05 13.1 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Seadorna_VP7 PF07387.11 ORF98628 - 0.063 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 Tetraspanin PF00335.20 ORF97705 - 6.9e-05 22.7 19.1 6.9e-05 22.7 19.1 2.3 1 1 1 2 2 2 2 Tetraspanin family MARVEL PF01284.23 ORF97705 - 0.19 11.8 9.3 0.018 15.1 4.5 1.8 2 0 0 2 2 2 0 Membrane-associating domain DUF4149 PF13664.6 ORF97705 - 2.1 8.7 7.5 8.1 6.8 0.6 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4149) TssN PF17555.2 ORF97705 - 4 6.7 12.4 0.3 10.4 7.4 1.6 2 0 0 2 2 2 0 Type VI secretion system, TssN DUF4231 PF14015.6 ORF97705 - 6.8 7.2 6.2 0.75 10.3 0.4 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF4231) BPD_transp_2 PF02653.16 ORF97314 - 1.2e-47 162.3 44.6 1.2e-47 162.3 44.6 1.5 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF3671 PF12420.8 ORF97314 - 0.59 10.2 6.8 0.77 9.9 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function 5_nucleotid_C PF02872.18 ORF93783 - 0.00024 21.4 0.0 0.00032 21.0 0.0 1.3 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain DNA_ligase_OB_2 PF14743.6 ORF87538 - 9.8e-28 96.0 1.0 2.1e-27 94.9 1.0 1.6 1 0 0 1 1 1 1 DNA ligase OB-like domain DNA_ligase_A_M PF01068.21 ORF87538 - 5.6e-13 49.0 1.1 1.9e-12 47.3 1.1 1.9 1 1 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.10 ORF87538 - 0.00016 22.0 0.2 0.00028 21.3 0.2 1.4 1 0 0 1 1 1 1 RNA ligase DUF4666 PF15697.5 ORF87538 - 0.43 11.3 2.9 4.7 7.9 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4666) EGF PF00008.27 ORF8683 - 0.022 15.1 2.6 0.022 15.1 2.6 1.7 2 0 0 2 2 2 0 EGF-like domain EGF_2 PF07974.13 ORF8683 - 0.083 13.3 5.5 0.14 12.5 5.5 1.4 1 0 0 1 1 1 0 EGF-like domain Laminin_EGF PF00053.24 ORF8683 - 0.22 11.7 3.2 0.53 10.5 3.2 1.6 1 0 0 1 1 1 0 Laminin EGF domain Enolase_C PF00113.22 ORF78558 - 2.1e-142 473.7 0.0 2.4e-142 473.5 0.0 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain MR_MLE_C PF13378.6 ORF78558 - 1.9e-07 30.9 0.0 2.7e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 ORF78558 - 8.6e-05 21.8 0.1 0.00015 21.0 0.1 1.4 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus ParcG PF10274.9 ORF72654 - 3e-81 271.9 0.0 4.7e-81 271.3 0.0 1.3 1 0 0 1 1 1 1 Parkin co-regulated protein DCB PF16213.5 ORF72654 - 0.0022 17.7 0.0 0.0045 16.7 0.0 1.5 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 UME PF08064.13 ORF72654 - 0.19 11.7 0.0 0.44 10.5 0.0 1.6 1 1 0 1 1 1 0 UME (NUC010) domain MFS_1 PF07690.16 ORF72349 - 1.2e-08 34.3 3.6 1.2e-08 34.3 3.6 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_4 PF06779.14 ORF72349 - 0.0015 17.9 4.3 0.0015 17.9 4.3 2.1 2 1 1 3 3 3 1 Uncharacterised MFS-type transporter YbfB TIP41 PF04176.13 ORF71174 - 1.6e-42 144.9 1.0 6.7e-42 142.9 1.0 1.8 1 1 0 1 1 1 1 TIP41-like family Tetraspanin PF00335.20 ORF67170 - 6.9e-05 22.7 19.1 6.9e-05 22.7 19.1 2.3 1 1 1 2 2 2 2 Tetraspanin family MARVEL PF01284.23 ORF67170 - 0.19 11.8 9.3 0.018 15.1 4.5 1.8 2 0 0 2 2 2 0 Membrane-associating domain DUF4149 PF13664.6 ORF67170 - 2.1 8.7 7.5 8.1 6.8 0.6 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4149) TssN PF17555.2 ORF67170 - 4 6.7 12.4 0.3 10.4 7.4 1.6 2 0 0 2 2 2 0 Type VI secretion system, TssN DUF4231 PF14015.6 ORF67170 - 6.8 7.2 6.2 0.75 10.3 0.4 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF4231) DUF1664 PF07889.12 ORF64818 - 0.0085 16.1 27.8 0.13 12.4 3.7 4.6 2 2 1 4 4 4 3 Protein of unknown function (DUF1664) DUF4795 PF16043.5 ORF64818 - 0.049 13.2 28.5 0.043 13.4 14.3 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF2203 PF09969.9 ORF64818 - 0.082 13.6 17.3 1.5 9.5 1.6 3.7 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) KxDL PF10241.9 ORF64818 - 0.16 12.3 14.4 8.6 6.7 0.1 4.6 3 1 1 4 4 4 0 Uncharacterized conserved protein Syntaxin_2 PF14523.6 ORF64818 - 0.72 10.3 29.5 5.1 7.5 5.5 4.2 2 1 2 4 4 4 0 Syntaxin-like protein ZnuA PF01297.17 ORF64818 - 0.87 8.9 6.0 1.2 8.5 0.2 2.8 2 1 1 3 3 3 0 Zinc-uptake complex component A periplasmic COG5 PF10392.9 ORF64818 - 0.89 9.7 14.6 3.1 8.0 0.2 4.3 1 1 3 4 4 4 0 Golgi transport complex subunit 5 Tweety PF04906.13 ORF64818 - 1.7 7.2 8.5 4.2 5.9 0.1 3.0 2 1 1 3 3 3 0 Tweety Occludin_ELL PF07303.13 ORF64818 - 1.8 9.3 18.5 1.3 9.8 1.1 4.7 1 1 4 5 5 5 0 Occludin homology domain COG2 PF06148.11 ORF64818 - 1.8 8.6 22.1 0.37 10.9 0.8 4.3 1 1 2 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF16 PF01519.16 ORF64818 - 2.5 8.7 34.8 2.2 8.8 5.0 4.9 1 1 2 3 3 2 0 Protein of unknown function DUF16 DUF4446 PF14584.6 ORF64818 - 3.8 7.5 24.0 0.75 9.8 1.8 4.4 1 1 1 4 4 4 0 Protein of unknown function (DUF4446) Spectrin PF00435.21 ORF64818 - 7.3 7.1 17.2 8.1 7.0 1.9 3.9 1 1 2 4 4 4 0 Spectrin repeat Peptidase_C48 PF02902.19 ORF62779 - 0.0021 17.9 0.0 0.005 16.7 0.0 1.5 2 0 0 2 2 2 1 Ulp1 protease family, C-terminal catalytic domain FAM27 PF15832.5 ORF62779 - 0.048 14.2 0.4 0.087 13.4 0.4 1.3 1 0 0 1 1 1 0 FAM27 D and E protein family MFS_1 PF07690.16 ORF61922 - 5.5e-40 137.4 47.5 1.5e-37 129.4 23.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF61922 - 0.00034 19.6 18.7 0.00048 19.1 18.1 1.5 1 1 1 2 2 2 1 Sugar (and other) transporter MASE3 PF17159.4 ORF61922 - 0.021 14.5 0.3 0.021 14.5 0.3 2.6 3 0 0 3 3 3 0 Membrane-associated sensor domain Git3 PF11710.8 ORF61922 - 0.82 9.4 8.8 0.19 11.5 3.4 2.4 2 1 0 2 2 2 0 G protein-coupled glucose receptor regulating Gpa2 OATP PF03137.20 ORF61922 - 8.1 4.6 11.0 0.16 10.2 2.9 2.0 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Pkinase PF00069.25 ORF60775 - 3.2e-69 233.2 0.0 3.7e-69 233.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60775 - 5.2e-41 140.6 0.0 6.4e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF60775 - 0.00013 21.4 0.1 0.0003 20.2 0.0 1.5 2 0 0 2 2 2 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF60775 - 0.05 13.1 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Seadorna_VP7 PF07387.11 ORF60775 - 0.063 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 DUF4127 PF13552.6 ORF56892 - 0.086 11.4 0.0 0.11 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4127) INTS5_N PF14837.6 ORF56892 - 0.12 11.9 0.0 0.33 10.5 0.0 1.7 1 1 0 1 1 1 0 Integrator complex subunit 5 N-terminus Pkinase PF00069.25 ORF50175 - 3.2e-69 233.2 0.0 3.7e-69 233.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF50175 - 5.2e-41 140.6 0.0 6.4e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF50175 - 0.00013 21.4 0.1 0.0003 20.2 0.0 1.5 2 0 0 2 2 2 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF50175 - 0.05 13.1 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Seadorna_VP7 PF07387.11 ORF50175 - 0.063 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 Prefoldin PF02996.17 ORF47959 - 0.31 10.9 3.6 11 6.0 0.1 2.2 2 0 0 2 2 2 0 Prefoldin subunit CASP_C PF08172.12 ORF47959 - 1.4 8.2 6.3 0.22 10.8 1.9 1.9 2 1 0 2 2 2 0 CASP C terminal Rx_N PF18052.1 ORF47959 - 2.1 8.7 8.3 1.1 9.6 2.9 2.5 2 1 0 2 2 2 0 Rx N-terminal domain PSK_trans_fac PF07704.11 ORF47959 - 5.8 7.8 18.4 1.1 10.0 1.8 2.9 3 0 0 3 3 3 0 Rv0623-like transcription factor Carb_anhydrase PF00194.21 ORF47957 - 1.2e-29 103.7 0.1 1.8e-29 103.1 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMEM132D_C PF15706.5 ORF47957 - 0.0035 17.1 0.5 0.018 14.8 0.1 2.1 2 0 0 2 2 2 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Claudin_3 PF06653.11 ORF47957 - 0.057 13.4 0.4 0.18 11.7 0.1 1.9 2 0 0 2 2 2 0 Tight junction protein, Claudin-like TMEM154 PF15102.6 ORF47957 - 0.089 12.7 0.0 0.089 12.7 0.0 2.2 3 0 0 3 3 3 0 TMEM154 protein family eIF2_C PF09173.11 ORF4658 - 8.7e-29 99.6 1.0 1.4e-28 98.9 0.3 1.7 2 0 0 2 2 2 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU PF00009.27 ORF4658 - 5.1e-09 35.9 0.0 6.4e-09 35.6 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF4658 - 8.3e-09 35.7 1.0 2.2e-08 34.4 0.4 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1_Xtn PF16897.5 ORF4658 - 0.18 11.9 1.1 0.93 9.5 0.2 2.2 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain RRP36 PF06102.12 ORF45779 - 0.013 15.5 8.7 0.013 15.5 8.7 3.4 2 1 0 3 3 3 0 rRNA biogenesis protein RRP36 UPF0240 PF06784.11 ORF45779 - 0.025 14.7 1.0 0.025 14.7 1.0 3.0 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0240) Spc7 PF08317.11 ORF45779 - 0.16 10.8 42.1 0.017 14.0 9.0 3.2 1 1 1 3 3 3 0 Spc7 kinetochore protein CENP-F_leu_zip PF10473.9 ORF45779 - 0.25 11.4 33.5 0.2 11.7 8.4 3.5 2 1 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HMG_box_2 PF09011.10 ORF45779 - 0.63 10.7 4.9 0.7 10.5 0.1 2.9 2 1 1 3 3 3 0 HMG-box domain A2M_recep PF07677.14 ORF45779 - 1.2 9.9 7.7 9.4 7.0 0.0 3.4 2 1 2 4 4 4 0 A-macroglobulin receptor binding domain KASH_CCD PF14662.6 ORF45779 - 4.3 7.1 37.7 4 7.2 11.1 3.3 1 1 3 4 4 4 0 Coiled-coil region of CCDC155 or KASH Viral_P18 PF04521.13 ORF45779 - 5.4 6.8 6.6 2.7 7.8 0.1 2.9 2 1 0 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein DUF2431 PF10354.9 ORF39581 - 2.6e-22 79.9 0.0 3.4e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) PriA_3primeBD PF17764.1 ORF39581 - 0.14 12.1 0.0 0.33 10.9 0.0 1.6 1 0 0 1 1 1 0 3′ DNA-binding domain (3′BD) DUF1664 PF07889.12 ORF36797 - 0.0085 16.1 27.8 0.13 12.4 3.7 4.6 2 2 1 4 4 4 3 Protein of unknown function (DUF1664) DUF4795 PF16043.5 ORF36797 - 0.049 13.2 28.5 0.043 13.4 14.3 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF2203 PF09969.9 ORF36797 - 0.082 13.6 17.3 1.5 9.5 1.6 3.7 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) KxDL PF10241.9 ORF36797 - 0.16 12.3 14.4 8.6 6.7 0.1 4.6 3 1 1 4 4 4 0 Uncharacterized conserved protein Syntaxin_2 PF14523.6 ORF36797 - 0.72 10.3 29.5 5.1 7.5 5.5 4.2 2 1 2 4 4 4 0 Syntaxin-like protein ZnuA PF01297.17 ORF36797 - 0.87 8.9 6.0 1.2 8.5 0.2 2.8 2 1 1 3 3 3 0 Zinc-uptake complex component A periplasmic COG5 PF10392.9 ORF36797 - 0.89 9.7 14.6 3.1 8.0 0.2 4.3 1 1 3 4 4 4 0 Golgi transport complex subunit 5 Tweety PF04906.13 ORF36797 - 1.7 7.2 8.5 4.2 5.9 0.1 3.0 2 1 1 3 3 3 0 Tweety Occludin_ELL PF07303.13 ORF36797 - 1.8 9.3 18.5 1.3 9.8 1.1 4.7 1 1 4 5 5 5 0 Occludin homology domain COG2 PF06148.11 ORF36797 - 1.8 8.6 22.1 0.37 10.9 0.8 4.3 1 1 2 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF16 PF01519.16 ORF36797 - 2.5 8.7 34.8 2.2 8.8 5.0 4.9 1 1 2 3 3 2 0 Protein of unknown function DUF16 DUF4446 PF14584.6 ORF36797 - 3.8 7.5 24.0 0.75 9.8 1.8 4.4 1 1 1 4 4 4 0 Protein of unknown function (DUF4446) Spectrin PF00435.21 ORF36797 - 7.3 7.1 17.2 8.1 7.0 1.9 3.9 1 1 2 4 4 4 0 Spectrin repeat zf-RING_2 PF13639.6 ORF36261 - 5.8e-13 48.9 6.3 1.1e-12 48.1 6.3 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF36261 - 5.8e-09 35.5 2.3 5.8e-09 35.5 2.3 2.0 2 0 0 2 2 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF36261 - 1e-08 35.3 4.3 2.8e-08 33.9 4.3 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF36261 - 4.7e-08 32.8 6.9 9.2e-08 31.8 6.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF36261 - 1.5e-07 31.3 1.5 1.5e-07 31.3 1.5 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF36261 - 4.2e-07 29.7 5.6 8.2e-07 28.8 5.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF36261 - 2.5e-06 27.5 2.7 2.5e-06 27.5 2.7 2.0 2 1 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 ORF36261 - 5.7e-05 23.2 5.7 0.00012 22.1 5.7 1.6 1 0 0 1 1 1 1 RING-variant domain zf-RING_5 PF14634.6 ORF36261 - 6e-05 22.9 5.8 0.00011 22.0 5.8 1.5 1 0 0 1 1 1 1 zinc-RING finger domain FANCL_C PF11793.8 ORF36261 - 8.7e-05 22.6 3.7 0.00022 21.3 3.7 1.7 1 0 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 ORF36261 - 0.0016 18.3 3.6 0.0032 17.3 3.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF36261 - 0.0048 17.0 4.8 0.011 15.9 4.8 1.7 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Zn_ribbon_17 PF17120.5 ORF36261 - 0.0056 16.3 5.1 0.015 14.9 5.1 1.7 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-Nse PF11789.8 ORF36261 - 0.025 14.4 3.1 0.049 13.5 3.1 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Prok-RING_1 PF14446.6 ORF36261 - 0.071 13.1 5.1 0.44 10.5 1.4 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 ORF36261 - 0.079 12.8 3.4 0.21 11.5 3.5 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 PHD PF00628.29 ORF36261 - 0.14 12.0 7.1 0.19 11.6 6.0 1.8 2 0 0 2 2 2 0 PHD-finger zf-RING_4 PF14570.6 ORF36261 - 0.51 10.2 4.8 0.97 9.3 4.8 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Tyrosinase PF00264.20 ORF34269 - 2.8e-07 31.0 0.1 5.2e-07 30.2 0.1 1.5 1 0 0 1 1 1 1 Common central domain of tyrosinase NOG1 PF06858.14 ORF34003 - 1.2e-13 50.6 0.0 3.8e-13 49.0 0.0 1.8 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 ORF34003 - 6.4e-12 45.6 0.0 1e-11 44.9 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF34003 - 0.00056 19.5 0.0 0.00093 18.8 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF34003 - 0.00083 19.3 0.1 0.021 14.7 0.1 2.4 2 1 0 2 2 2 1 RsgA GTPase AAA_15 PF13175.6 ORF34003 - 0.008 15.9 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Dynamin_N PF00350.23 ORF34003 - 0.03 14.4 0.2 10 6.2 0.0 2.3 1 1 1 2 2 2 0 Dynamin family AAA_16 PF13191.6 ORF34003 - 0.091 13.1 0.1 0.76 10.1 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain Roc PF08477.13 ORF34003 - 0.18 12.1 0.0 0.35 11.1 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1_Xtn PF16897.5 ORF34003 - 0.19 11.8 0.0 0.34 10.9 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Lectin_like PF18560.1 ORF32789 - 0.11 12.6 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 Lectin like domain S-AdoMet_synt_C PF02773.16 ORF28417 - 5.5e-29 100.9 0.0 8.7e-29 100.3 0.0 1.3 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 ORF28417 - 1.1e-26 93.4 0.0 1.9e-26 92.7 0.0 1.3 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 ORF28417 - 2.3e-10 41.0 0.1 6.2e-10 39.6 0.1 1.8 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain Patatin PF01734.22 ORF27248 - 6.3e-22 78.8 1.3 9.4e-22 78.2 1.3 1.3 1 0 0 1 1 1 1 Patatin-like phospholipase Pox_A30L_A26L PF06086.12 ORF26550 - 0.028 14.1 0.3 0.82 9.3 0.3 2.2 2 0 0 2 2 2 0 Orthopoxvirus A26L/A30L protein HI0933_like PF03486.14 ORF26550 - 3.5 6.2 6.4 5.4 5.6 6.4 1.2 1 0 0 1 1 1 0 HI0933-like protein Kinesin PF00225.23 ORF26108 - 3.1e-30 105.3 0.8 4.3e-30 104.8 0.0 1.6 2 0 0 2 2 2 1 Kinesin motor domain DUF3909 PF13077.6 ORF26108 - 0.094 12.9 3.9 5.4 7.2 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3909) dCache_1 PF02743.18 ORF26108 - 0.095 12.5 0.3 0.18 11.5 0.3 1.4 1 0 0 1 1 1 0 Cache domain Glutaredoxin2_C PF04399.13 ORF26108 - 0.58 10.0 4.7 0.8 9.5 0.4 2.5 3 0 0 3 3 3 0 Glutaredoxin 2, C terminal domain DUF1129 PF06570.11 ORF25319 - 8.8 5.8 11.0 0.48 9.9 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) Band_7 PF01145.25 ORF22121 - 7.7e-27 94.4 0.6 7.7e-27 94.4 0.6 1.6 1 1 1 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 ORF22121 - 6e-11 42.2 0.0 1.7e-10 40.8 0.0 1.8 1 0 0 1 1 1 1 C-terminal region of band_7 DUF2378 PF09536.10 ORF22121 - 0.065 13.1 0.0 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2378) DUF1997 PF09366.10 ORF22121 - 0.1 12.8 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1997) Methyltransf_12 PF08242.12 ORF19109 - 0.034 14.9 0.0 0.13 13.0 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Pkinase PF00069.25 ORF16195 - 2.4e-28 99.3 2.5 3.5e-28 98.7 2.5 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF16195 - 7.1e-14 51.7 0.4 1.8e-13 50.4 0.4 1.7 1 1 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF16195 - 8.8e-06 24.9 6.6 1.2e-05 24.5 6.6 1.3 1 1 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF16195 - 0.00047 20.2 0.1 0.021 14.8 0.1 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF16195 - 0.11 11.9 0.2 0.21 10.9 0.2 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 ORF15350 - 3.2e-69 233.2 0.0 3.7e-69 233.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF15350 - 5.2e-41 140.6 0.0 6.4e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF15350 - 0.00013 21.4 0.1 0.0003 20.2 0.0 1.5 2 0 0 2 2 2 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF15350 - 0.05 13.1 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Seadorna_VP7 PF07387.11 ORF15350 - 0.063 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 MR_MLE_C PF13378.6 ORF1270 - 3.5e-41 141.2 0.0 5e-41 140.7 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 ORF1270 - 9.3e-06 25.9 1.2 1.8e-05 24.9 0.1 2.0 2 1 1 3 3 3 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AKNA PF12443.8 ORF11647 - 3.2 8.5 7.0 0.83 10.3 1.9 2.5 2 1 0 2 2 2 0 AT-hook-containing transcription factor DUF2203 PF09969.9 ORF11647 - 3.9 8.2 9.6 6.8 7.4 1.4 2.7 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) Pantoate_transf PF02548.15 ORF102221 - 3.3e-48 164.3 0.1 4.5e-46 157.3 0.1 2.0 1 1 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.6 ORF102221 - 0.0063 16.0 0.5 0.15 11.4 0.0 2.8 3 0 0 3 3 3 1 Phosphoenolpyruvate phosphomutase Kinesin PF00225.23 ORF101829 - 3.1e-30 105.3 0.8 4.3e-30 104.8 0.0 1.6 2 0 0 2 2 2 1 Kinesin motor domain DUF3909 PF13077.6 ORF101829 - 0.094 12.9 3.9 5.4 7.2 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3909) dCache_1 PF02743.18 ORF101829 - 0.095 12.5 0.3 0.18 11.5 0.3 1.4 1 0 0 1 1 1 0 Cache domain Glutaredoxin2_C PF04399.13 ORF101829 - 0.58 10.0 4.7 0.8 9.5 0.4 2.5 3 0 0 3 3 3 0 Glutaredoxin 2, C terminal domain Ribosomal_S11 PF00411.19 ORF100954 - 0.03 14.7 0.5 0.22 11.9 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein S11 Ion_trans PF00520.31 ORF100596 - 8.9e-10 38.2 9.7 1.2e-09 37.8 9.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF100596 - 3.7e-07 29.5 0.1 0.026 14.5 0.0 2.8 2 1 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF100596 - 2.1e-05 23.7 0.2 0.061 12.9 0.1 2.9 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF100596 - 0.00011 21.5 0.3 0.17 11.5 0.0 3.3 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF100596 - 0.00027 20.7 0.2 0.012 15.4 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF100596 - 0.00038 20.9 0.0 0.00089 19.7 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain pair PilJ PF13675.6 ORF100596 - 0.05 13.6 0.0 0.11 12.5 0.0 1.6 1 1 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term BCIP PF13862.6 ORF100596 - 0.063 13.1 0.0 0.097 12.4 0.0 1.3 1 0 0 1 1 1 0 p21-C-terminal region-binding protein DUF3671 PF12420.8 ORF100596 - 1.6 8.8 5.2 7.1 6.7 5.3 2.1 1 1 0 1 1 1 0 Protein of unknown function NinF PF05810.12 NODE_20269_length_973_cov_152.828358_g15539_i0reverse_frame_1 - 0.0089 15.9 0.0 0.03 14.2 0.0 1.9 1 0 0 1 1 1 1 NinF protein RCC1_2 PF13540.6 NODE_20269_length_973_cov_152.828358_g15539_i0forward_frame_1 - 4.5e-06 26.3 7.7 0.26 11.1 0.1 4.4 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Yuri_gagarin PF15934.5 NODE_20269_length_973_cov_152.828358_g15539_i0forward_frame_1 - 0.085 12.7 0.1 0.18 11.6 0.0 1.5 2 0 0 2 2 2 0 Yuri gagarin OKR_DC_1 PF01276.20 NODE_20245_length_974_cov_2.787007_g15518_i0reverse_frame_1 - 9.4e-85 284.9 0.0 1.1e-84 284.6 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.15 NODE_20245_length_974_cov_2.787007_g15518_i0reverse_frame_1 - 1.6e-26 93.2 0.1 3.1e-26 92.2 0.1 1.5 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain Collectrin PF16959.5 NODE_20245_length_974_cov_2.787007_g15518_i0reverse_frame_1 - 0.026 14.3 0.0 1.9 8.2 0.0 2.1 2 0 0 2 2 2 0 Renal amino acid transporter His_Phos_1 PF00300.22 NODE_20231_length_974_cov_237.241747_g15506_i0forward_frame_1 - 9.1e-09 35.3 0.0 1.6e-07 31.2 0.0 2.1 2 0 0 2 2 2 1 Histidine phosphatase superfamily (branch 1) COMPASS-Shg1 PF05205.12 NODE_20231_length_974_cov_237.241747_g15506_i0forward_frame_1 - 0.0078 16.9 2.1 4.1 8.2 0.3 2.8 2 1 0 2 2 2 2 COMPASS (Complex proteins associated with Set1p) component shg1 DUF2811 PF10929.8 NODE_20231_length_974_cov_237.241747_g15506_i0forward_frame_1 - 0.076 13.3 0.0 13 6.1 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2811) zf-Tim10_DDP PF02953.15 NODE_20204_length_975_cov_144.258511_g15482_i0forward_frame_1 - 0.001 18.6 4.0 0.001 18.6 4.0 1.7 1 1 0 1 1 1 1 Tim10/DDP family zinc finger DUF2585 PF10755.9 NODE_20191_length_975_cov_438.124468_g15470_i0forward_frame_1 - 0.074 12.8 1.1 0.16 11.7 1.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2585) HycA_repressor PF11046.8 NODE_20118_length_978_cov_80.077413_g15416_i0reverse_frame_3 - 0.025 14.8 0.0 0.047 13.9 0.0 1.6 1 0 0 1 1 1 0 Transcriptional repressor of hyc and hyp operons zf-RING_2 PF13639.6 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_3 - 4.7e-12 46.0 7.5 4.7e-12 46.0 7.5 3.2 3 0 0 3 3 3 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_3 - 2.8e-07 30.3 6.4 2.8e-07 30.3 6.4 2.6 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_3 - 5.9e-07 29.3 1.5 5.9e-07 29.3 1.5 2.5 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_3 - 0.00029 20.5 1.2 0.00029 20.5 1.2 3.5 4 0 0 4 4 4 1 RING-like zinc finger zf-rbx1 PF12678.7 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_3 - 0.00055 20.2 12.4 0.00058 20.1 8.7 2.9 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_3 - 0.00082 19.3 1.8 0.00082 19.3 1.8 3.1 4 0 0 4 4 4 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_3 - 0.0013 18.5 3.9 0.0013 18.5 3.9 3.1 3 1 1 4 4 4 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_3 - 0.048 13.5 4.5 0.24 11.2 4.5 2.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain RecR PF02132.15 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_3 - 0.13 11.9 2.1 6.4 6.4 0.2 3.2 2 0 0 2 2 2 0 RecR protein Rpr2 PF04032.16 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_2 - 0.031 14.5 1.1 0.78 10.1 0.2 2.7 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain EF-hand_1 PF00036.32 NODE_20109_length_978_cov_107.763521_g15407_i0forward_frame_2 - 0.13 11.9 0.3 0.28 10.8 0.0 1.7 2 0 0 2 2 2 0 EF hand STN1_2 PF09170.10 ORF99753 - 0.012 15.9 0.1 0.78 9.9 0.0 2.7 3 0 0 3 3 3 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 Hamartin PF04388.12 ORF99753 - 0.14 10.8 7.0 0.15 10.7 7.0 1.2 1 0 0 1 1 1 0 Hamartin protein adh_short PF00106.25 ORF99322 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF99322 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF99322 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF99322 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF99322 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Thioredoxin PF00085.20 ORF99293 - 1.7e-21 76.1 0.0 4.9e-21 74.7 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF99293 - 5.1e-05 23.7 0.4 0.00024 21.5 0.0 2.2 2 0 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF99293 - 0.00024 21.2 0.8 0.00042 20.4 0.0 1.8 2 0 0 2 2 1 1 Thioredoxin-like DUF2203 PF09969.9 ORF99293 - 0.011 16.5 3.1 0.026 15.2 3.1 1.6 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) zf-CpG_bind_C PF12269.8 ORF99293 - 0.021 14.6 4.4 0.034 13.9 4.4 1.3 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain OST3_OST6 PF04756.13 ORF99293 - 0.035 13.4 0.0 0.051 12.9 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family HemX PF04375.14 ORF99293 - 0.073 12.4 5.3 0.1 11.9 5.3 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase OmpH PF03938.14 ORF99293 - 0.074 13.4 10.9 0.15 12.4 10.9 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF1160 PF06648.11 ORF99293 - 0.077 13.0 0.4 0.13 12.3 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) V_ATPase_I PF01496.19 ORF99293 - 0.11 10.4 2.6 0.14 10.0 2.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RmuC PF02646.16 ORF99293 - 0.11 11.6 7.9 0.017 14.3 4.1 1.5 2 0 0 2 2 2 0 RmuC family Thioredoxin_8 PF13905.6 ORF99293 - 0.14 12.5 0.2 0.46 10.8 0.0 2.1 2 0 0 2 2 2 0 Thioredoxin-like AAA_23 PF13476.6 ORF99293 - 0.15 12.6 8.4 0.24 11.9 8.4 1.3 1 0 0 1 1 1 0 AAA domain DUF4355 PF14265.6 ORF99293 - 0.15 12.3 12.7 0.27 11.5 12.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4355) Flavodoxin_4 PF12682.7 ORF99293 - 0.18 11.5 0.0 0.42 10.3 0.0 1.6 1 0 0 1 1 1 0 Flavodoxin DUF4404 PF14357.6 ORF99293 - 0.9 10.2 7.7 4.5 8.0 7.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) DivIC PF04977.15 ORF99293 - 1.2 8.9 10.2 3.6 7.4 10.2 1.7 1 0 0 1 1 1 0 Septum formation initiator Katanin_con80 PF13925.6 ORF99293 - 1.9 8.5 5.6 0.68 10.0 3.1 1.5 2 0 0 2 2 1 0 con80 domain of Katanin DUF4140 PF13600.6 ORF99293 - 2.7 8.5 6.1 5.5 7.5 6.1 1.5 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Atg14 PF10186.9 ORF99293 - 6.5 5.7 8.9 9.2 5.2 8.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ECM11 PF15463.6 ORF99293 - 6.5 7.3 11.7 0.64 10.6 6.7 1.8 2 0 0 2 2 2 0 Extracellular mutant protein 11 HALZ PF02183.18 ORF98066 - 1.6e-06 28.2 35.6 0.0002 21.5 0.4 7.0 7 0 0 7 7 7 2 Homeobox associated leucine zipper MbeD_MobD PF04899.12 ORF98066 - 2.3e-05 24.4 7.5 0.15 12.2 0.3 3.6 2 1 1 3 3 3 2 MbeD/MobD like YabA PF06156.13 ORF98066 - 3.5e-05 24.4 41.1 0.0025 18.4 4.8 4.3 1 1 3 4 4 4 3 Initiation control protein YabA PRKG1_interact PF15898.5 ORF98066 - 0.00056 20.8 11.0 0.00056 20.8 11.0 3.4 1 1 2 3 3 3 2 cGMP-dependent protein kinase interacting domain DUF5082 PF16888.5 ORF98066 - 0.0011 19.3 43.3 0.054 13.8 17.7 4.2 1 1 2 3 3 3 2 Domain of unknown function (DUF5082) DivIC PF04977.15 ORF98066 - 0.0017 18.1 46.4 0.0032 17.2 2.9 5.9 2 1 3 5 5 5 2 Septum formation initiator Spc7 PF08317.11 ORF98066 - 0.0021 17.0 22.5 0.0021 17.0 22.5 2.4 1 1 1 2 2 2 1 Spc7 kinetochore protein KASH_CCD PF14662.6 ORF98066 - 0.0024 17.8 13.9 0.0024 17.8 13.9 2.9 1 1 0 2 2 2 1 Coiled-coil region of CCDC155 or KASH LPP PF04728.13 ORF98066 - 0.0049 17.2 7.1 0.042 14.2 0.9 5.4 3 2 3 6 6 5 2 Lipoprotein leucine-zipper ADIP PF11559.8 ORF98066 - 0.01 15.9 16.8 0.01 15.9 16.8 4.9 1 1 3 4 4 4 0 Afadin- and alpha -actinin-Binding UPF0242 PF06785.11 ORF98066 - 0.014 15.5 42.8 0.059 13.5 14.7 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF98066 - 0.024 14.9 9.3 0.024 14.9 9.3 4.3 1 1 3 4 4 3 0 Seryl-tRNA synthetase N-terminal domain CENP-F_leu_zip PF10473.9 ORF98066 - 0.054 13.5 39.2 0.11 12.6 12.0 3.7 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1664 PF07889.12 ORF98066 - 0.075 13.1 21.9 0.047 13.7 2.1 3.3 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) FUSC PF04632.12 ORF98066 - 0.079 11.5 0.0 0.16 10.5 0.0 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein family TSC22 PF01166.18 ORF98066 - 0.095 13.0 35.9 0.28 11.5 1.3 5.2 5 1 0 5 5 5 0 TSC-22/dip/bun family Filament PF00038.21 ORF98066 - 0.1 12.2 36.5 0.87 9.1 8.8 3.8 1 1 3 4 4 4 0 Intermediate filament protein MerR-DNA-bind PF09278.11 ORF98066 - 0.64 10.6 5.8 7 7.3 0.1 3.4 4 0 0 4 4 2 0 MerR, DNA binding ZapB PF06005.12 ORF98066 - 0.89 10.0 53.7 4.3 7.8 16.1 5.2 1 1 3 4 4 3 0 Cell division protein ZapB TPR_MLP1_2 PF07926.12 ORF98066 - 0.96 9.5 44.9 0.58 10.2 9.7 4.6 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein HMMR_N PF15905.5 ORF98066 - 1.2 8.6 45.8 0.015 14.8 22.6 2.1 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal NRBF2 PF08961.10 ORF98066 - 1.3 8.6 37.7 0.23 11.1 4.4 4.0 1 1 2 3 3 3 0 Nuclear receptor-binding factor 2, autophagy regulator DUF948 PF06103.11 ORF98066 - 1.4 9.2 13.7 2.3 8.6 2.6 2.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Alanine_zipper PF11839.8 ORF98066 - 1.9 8.9 7.9 2.2 8.7 0.3 3.5 3 0 0 3 3 3 0 Alanine-zipper, major outer membrane lipoprotein NPV_P10 PF05531.12 ORF98066 - 2.3 8.8 14.5 9.6 6.8 6.3 3.7 1 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein CCDC144C PF14915.6 ORF98066 - 2.4 7.2 46.7 0.24 10.5 10.3 2.4 1 1 1 2 2 2 0 CCDC144C protein coiled-coil region TMF_DNA_bd PF12329.8 ORF98066 - 2.9 8.0 55.1 3.6 7.6 5.8 5.5 2 1 4 6 6 6 0 TATA element modulatory factor 1 DNA binding GIT1_C PF12205.8 ORF98066 - 3 8.0 15.1 2 8.5 6.3 3.1 1 1 2 3 3 3 0 G protein-coupled receptor kinase-interacting protein 1 C term ABC_tran_CTD PF16326.5 ORF98066 - 3.4 8.0 22.4 0.1 12.9 1.7 4.0 3 2 1 4 4 4 0 ABC transporter C-terminal domain CEP63 PF17045.5 ORF98066 - 4.7 7.0 38.2 0.58 10.0 27.3 2.1 1 1 1 2 2 2 0 Centrosomal protein of 63 kDa CENP-H PF05837.12 ORF98066 - 4.7 7.7 40.5 3.9 7.9 8.8 3.3 1 1 2 3 3 3 0 Centromere protein H (CENP-H) DUF724 PF05266.14 ORF98066 - 5.4 6.8 37.2 1.1 9.1 4.6 3.7 1 1 3 4 4 4 0 Protein of unknown function (DUF724) DUF1515 PF07439.11 ORF98066 - 6.4 6.8 10.3 2.8 8.0 0.8 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1515) Leu_zip PF15294.6 ORF98066 - 9.6 5.6 43.1 17 4.8 19.6 3.2 1 1 2 3 3 3 0 Leucine zipper Fib_alpha PF08702.10 ORF98066 - 9.8 6.4 41.0 1.2 9.3 14.6 3.5 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family 2OG-FeII_Oxy_3 PF13640.6 ORF9506 - 4.5e-07 30.7 0.0 8.3e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_2 PF13532.6 ORF9506 - 0.0024 18.1 0.0 0.0042 17.3 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily PhyH PF05721.13 ORF9506 - 0.15 12.3 0.0 12 6.1 0.1 2.2 2 0 0 2 2 2 0 Phytanoyl-CoA dioxygenase (PhyH) Glyco_hydro_16 PF00722.21 ORF92319 - 1.1e-11 44.5 0.1 1.8e-11 43.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 adh_short PF00106.25 ORF91546 - 2.2e-36 125.2 0.0 3e-36 124.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF91546 - 4.1e-21 75.6 0.0 5.5e-21 75.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF91546 - 5.4e-08 32.9 0.0 7.6e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF91546 - 0.014 14.8 0.7 0.042 13.2 0.7 1.7 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) KH_7 PF17214.3 ORF91546 - 0.028 14.4 0.1 0.069 13.1 0.1 1.6 1 0 0 1 1 1 0 KH domain 3HCDH_N PF02737.18 ORF91546 - 0.077 12.9 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ribosomal_L5e PF17144.4 ORF91193 - 3e-71 238.7 0.9 5.8e-71 237.8 0.9 1.5 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 ORF91193 - 8.4e-20 71.5 12.3 8.4e-20 71.5 12.3 2.7 2 1 0 2 2 2 1 Ribosomal L18 C-terminal region DUF4055 PF13264.6 ORF89563 - 0.23 11.6 5.7 0.57 10.3 5.7 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4055) adh_short PF00106.25 ORF87326 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF87326 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF87326 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF87326 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF87326 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDC50 PF03381.15 ORF86574 - 7.2e-51 173.4 2.9 1e-50 172.8 2.9 1.2 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF2206 PF09971.9 ORF86574 - 0.55 8.9 8.7 0.14 10.9 3.4 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2206) CsiD PF08943.10 ORF83048 - 6.9e-150 498.1 0.0 7.9e-150 497.9 0.0 1.0 1 0 0 1 1 1 1 CsiD TauD PF02668.16 ORF83048 - 1.3e-07 31.7 0.1 1e-05 25.5 0.1 2.2 1 1 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family MSP PF01716.18 ORF82580 - 5.7e-83 277.8 0.3 6.8e-83 277.6 0.3 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide MSP PF01716.18 ORF8066 - 5.7e-83 277.8 0.3 6.8e-83 277.6 0.3 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide ssDNA_DBD PF18333.1 ORF7865 - 0.72 10.0 4.3 0.59 10.3 0.1 2.4 2 1 0 2 2 2 0 Non-canonical single-stranded DNA-binding domain PhnJ PF06007.11 ORF77639 - 8.8e-149 494.0 0.0 1.1e-148 493.7 0.0 1.0 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnJ Gp58 PF07902.11 ORF77163 - 1.4 7.1 39.9 0.66 8.2 27.5 2.1 1 1 1 2 2 2 0 gp58-like protein AAA_15 PF13175.6 ORF77163 - 3 7.5 16.7 4.3 6.9 16.7 1.3 1 0 0 1 1 1 0 AAA ATPase domain DUF948 PF06103.11 ORF77163 - 4.7 7.5 15.6 0.89 9.9 3.4 3.5 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) YojJ PF10372.9 ORF77163 - 4.8 7.3 25.9 2.2 8.4 0.4 4.6 4 1 1 5 5 5 0 Bacterial membrane-spanning protein N-terminus Pyr_redox_2 PF07992.14 ORF75655 - 0.12 11.5 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MSP PF01716.18 ORF73222 - 5.7e-83 277.8 0.3 6.8e-83 277.6 0.3 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide WD40 PF00400.32 ORF7270 - 0.0019 19.0 0.0 0.31 12.0 0.0 3.6 3 1 0 3 3 3 1 WD domain, G-beta repeat adh_short PF00106.25 ORF71285 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF71285 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF71285 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF71285 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF71285 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF2147 PF09917.9 ORF70016 - 0.14 12.8 1.8 2.1 9.0 0.1 2.5 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2147) ABM PF03992.16 ORF67000 - 7.1e-21 74.1 0.5 2.4e-11 43.6 0.3 2.7 2 1 0 2 2 2 2 Antibiotic biosynthesis monooxygenase SOR PF07682.11 ORF67000 - 0.01 14.8 0.0 1.5 7.6 0.0 2.1 2 0 0 2 2 2 2 Sulphur oxygenase reductase ApoB100_C PF12491.8 ORF66578 - 0.024 14.6 0.2 0.054 13.5 0.2 1.5 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal DUF2730 PF10805.8 ORF66578 - 0.12 12.4 2.6 0.26 11.4 0.4 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2730) Spore_III_AB PF09548.10 ORF66578 - 0.2 11.7 1.2 11 6.1 0.4 2.5 2 0 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) RAMPs PF03787.15 ORF66578 - 0.6 10.1 5.3 2.6 8.0 5.3 2.2 1 1 0 1 1 1 0 RAMP superfamily DUF948 PF06103.11 ORF66578 - 1.4 9.2 5.3 12 6.3 0.5 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) MSP PF01716.18 ORF66166 - 5.7e-83 277.8 0.3 6.8e-83 277.6 0.3 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide adh_short PF00106.25 ORF63588 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF63588 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF63588 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF63588 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF63588 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ASPRs PF17641.2 ORF62423 - 0.076 13.3 1.6 0.17 12.1 1.3 1.8 1 1 0 1 1 1 0 Ancylostoma-associated secreted protein related KIX PF02172.16 ORF62423 - 0.25 11.7 4.1 0.41 11.0 0.1 3.1 3 0 0 3 3 3 0 KIX domain Sigma70_r1_1 PF03979.14 ORF62423 - 1.3 9.1 7.6 4.1 7.5 0.2 3.1 3 0 0 3 3 3 0 Sigma-70 factor, region 1.1 DUF1539 PF07560.11 ORF62423 - 4.2 7.5 10.7 2.7 8.1 1.3 3.1 1 1 2 3 3 3 0 Domain of Unknown Function (DUF1539) Thi4 PF01946.17 ORF56600 - 3.9e-105 350.3 0.3 4.7e-105 350.0 0.3 1.1 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 ORF56600 - 2.3e-10 40.6 1.6 1.1e-08 35.0 0.3 2.1 1 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF56600 - 1.2e-08 34.5 0.5 8.8e-07 28.3 0.1 2.2 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF56600 - 7.1e-08 32.0 0.2 1.8e-07 30.7 0.2 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF56600 - 7.8e-08 32.4 0.0 1.8e-07 31.3 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 ORF56600 - 9.2e-05 22.5 2.0 0.0054 16.7 0.0 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF56600 - 0.0001 21.2 0.7 0.00025 19.9 0.1 1.9 3 0 0 3 3 3 1 HI0933-like protein FAD_oxidored PF12831.7 ORF56600 - 0.00012 21.6 0.1 0.00012 21.6 0.1 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF56600 - 0.00016 20.9 1.2 0.0003 20.0 0.2 1.8 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 ORF56600 - 0.00045 19.6 0.2 0.0015 17.9 0.1 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF56600 - 0.0027 17.0 0.0 0.005 16.1 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.6 ORF56600 - 0.0067 15.6 0.0 0.097 11.8 0.0 2.2 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) GMC_oxred_N PF00732.19 ORF56600 - 0.017 14.5 0.1 0.16 11.3 0.0 2.1 2 0 0 2 2 2 0 GMC oxidoreductase GIDA PF01134.22 ORF56600 - 0.018 14.2 0.3 0.068 12.2 0.2 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A Amino_oxidase PF01593.24 ORF56600 - 0.082 12.2 0.0 0.17 11.2 0.0 1.5 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Lipase_3 PF01764.25 ORF54649 - 3.5e-28 98.3 0.0 5.4e-28 97.6 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_5 PF12695.7 ORF54649 - 0.00068 19.4 0.0 0.0015 18.3 0.0 1.5 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF2974 PF11187.8 ORF54649 - 0.0067 16.0 0.1 0.018 14.6 0.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 ORF54649 - 0.0093 15.3 0.0 0.015 14.5 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF54649 - 0.012 15.3 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold PGAP1 PF07819.13 ORF54649 - 0.016 15.0 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein UPF0227 PF05728.12 ORF54649 - 0.023 14.7 0.0 0.053 13.5 0.0 1.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) Abhydrolase_6 PF12697.7 ORF54649 - 0.053 14.1 0.0 0.067 13.8 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Cutinase PF01083.22 ORF54649 - 0.055 13.4 0.2 0.1 12.6 0.0 1.6 2 0 0 2 2 2 0 Cutinase Metallophos PF00149.28 ORF46562 - 6e-37 128.1 0.2 9.4e-37 127.5 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF46562 - 0.014 15.8 0.0 0.032 14.7 0.0 1.6 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain Thioredoxin PF00085.20 ORF46500 - 1.7e-21 76.1 0.0 4.9e-21 74.7 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF46500 - 5.1e-05 23.7 0.4 0.00024 21.5 0.0 2.2 2 0 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF46500 - 0.00024 21.2 0.8 0.00042 20.4 0.0 1.8 2 0 0 2 2 1 1 Thioredoxin-like DUF2203 PF09969.9 ORF46500 - 0.011 16.5 3.1 0.026 15.2 3.1 1.6 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) zf-CpG_bind_C PF12269.8 ORF46500 - 0.021 14.6 4.4 0.034 13.9 4.4 1.3 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain OST3_OST6 PF04756.13 ORF46500 - 0.035 13.4 0.0 0.051 12.9 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family HemX PF04375.14 ORF46500 - 0.073 12.4 5.3 0.1 11.9 5.3 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase OmpH PF03938.14 ORF46500 - 0.074 13.4 10.9 0.15 12.4 10.9 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF1160 PF06648.11 ORF46500 - 0.077 13.0 0.4 0.13 12.3 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) V_ATPase_I PF01496.19 ORF46500 - 0.11 10.4 2.6 0.14 10.0 2.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RmuC PF02646.16 ORF46500 - 0.11 11.6 7.9 0.017 14.3 4.1 1.5 2 0 0 2 2 2 0 RmuC family Thioredoxin_8 PF13905.6 ORF46500 - 0.14 12.5 0.2 0.46 10.8 0.0 2.1 2 0 0 2 2 2 0 Thioredoxin-like AAA_23 PF13476.6 ORF46500 - 0.15 12.6 8.4 0.24 11.9 8.4 1.3 1 0 0 1 1 1 0 AAA domain DUF4355 PF14265.6 ORF46500 - 0.15 12.3 12.7 0.27 11.5 12.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4355) Flavodoxin_4 PF12682.7 ORF46500 - 0.18 11.5 0.0 0.42 10.3 0.0 1.6 1 0 0 1 1 1 0 Flavodoxin DUF4404 PF14357.6 ORF46500 - 0.9 10.2 7.7 4.5 8.0 7.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) DivIC PF04977.15 ORF46500 - 1.2 8.9 10.2 3.6 7.4 10.2 1.7 1 0 0 1 1 1 0 Septum formation initiator Katanin_con80 PF13925.6 ORF46500 - 1.9 8.5 5.6 0.68 10.0 3.1 1.5 2 0 0 2 2 1 0 con80 domain of Katanin DUF4140 PF13600.6 ORF46500 - 2.7 8.5 6.1 5.5 7.5 6.1 1.5 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Atg14 PF10186.9 ORF46500 - 6.5 5.7 8.9 9.2 5.2 8.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ECM11 PF15463.6 ORF46500 - 6.5 7.3 11.7 0.64 10.6 6.7 1.8 2 0 0 2 2 2 0 Extracellular mutant protein 11 DLH PF01738.18 ORF45673 - 1.8e-31 109.4 0.5 1.8e-31 109.4 0.5 1.4 2 0 0 2 2 2 1 Dienelactone hydrolase family BAAT_C PF08840.11 ORF45673 - 0.0053 16.7 0.9 0.42 10.5 0.1 3.0 3 0 0 3 3 3 1 BAAT / Acyl-CoA thioester hydrolase C terminal DUF1100 PF06500.11 ORF45673 - 0.014 14.2 0.0 0.024 13.4 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) AXE1 PF05448.12 ORF45673 - 0.016 13.9 1.0 0.16 10.6 0.6 2.1 1 1 1 2 2 2 0 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 ORF45673 - 0.027 13.9 0.6 0.061 12.8 0.6 1.6 1 0 0 1 1 1 0 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF45673 - 0.085 13.5 0.0 0.16 12.6 0.0 1.5 1 0 0 1 1 1 0 Alpha/beta hydrolase family Thi4 PF01946.17 ORF44226 - 3.9e-105 350.3 0.3 4.7e-105 350.0 0.3 1.1 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 ORF44226 - 2.3e-10 40.6 1.6 1.1e-08 35.0 0.3 2.1 1 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF44226 - 1.2e-08 34.5 0.5 8.8e-07 28.3 0.1 2.2 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF44226 - 7.1e-08 32.0 0.2 1.8e-07 30.7 0.2 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF44226 - 7.8e-08 32.4 0.0 1.8e-07 31.3 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 ORF44226 - 9.2e-05 22.5 2.0 0.0054 16.7 0.0 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF44226 - 0.0001 21.2 0.7 0.00025 19.9 0.1 1.9 3 0 0 3 3 3 1 HI0933-like protein FAD_oxidored PF12831.7 ORF44226 - 0.00012 21.6 0.1 0.00012 21.6 0.1 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF44226 - 0.00016 20.9 1.2 0.0003 20.0 0.2 1.8 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 ORF44226 - 0.00045 19.6 0.2 0.0015 17.9 0.1 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF44226 - 0.0027 17.0 0.0 0.005 16.1 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.6 ORF44226 - 0.0067 15.6 0.0 0.097 11.8 0.0 2.2 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) GMC_oxred_N PF00732.19 ORF44226 - 0.017 14.5 0.1 0.16 11.3 0.0 2.1 2 0 0 2 2 2 0 GMC oxidoreductase GIDA PF01134.22 ORF44226 - 0.018 14.2 0.3 0.068 12.2 0.2 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A Amino_oxidase PF01593.24 ORF44226 - 0.082 12.2 0.0 0.17 11.2 0.0 1.5 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase TBCC_N PF16752.5 ORF37564 - 1.7 9.1 6.4 0.46 10.9 0.3 2.7 2 1 1 3 3 3 0 Tubulin-specific chaperone C N-terminal domain F5_F8_type_C PF00754.25 ORF3725 - 1.6e-26 92.9 4.1 2.6e-13 50.2 0.0 2.8 3 1 0 3 3 3 2 F5/8 type C domain Mucin PF01456.17 ORF3725 - 0.0059 16.6 15.7 0.0059 16.6 15.7 2.5 3 0 0 3 3 3 2 Mucin-like glycoprotein MGC-24 PF05283.11 ORF3725 - 2.3 8.7 19.1 3.7 8.0 6.9 2.3 2 0 0 2 2 2 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Acetyltransf_1 PF00583.25 ORF29132 - 2.6e-12 47.0 0.1 7.7e-12 45.5 0.1 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF29132 - 2.4e-11 43.7 0.1 8.1e-11 42.0 0.1 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF29132 - 5.6e-08 33.1 0.1 1.6e-07 31.6 0.1 1.9 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF29132 - 1.4e-05 24.9 0.0 3.4e-05 23.7 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF29132 - 0.0047 17.0 0.0 0.033 14.3 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF29132 - 0.063 13.4 0.1 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase NESP55 PF06390.12 ORF29132 - 0.12 11.9 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) adh_short PF00106.25 ORF28996 - 5.9e-36 123.8 0.0 8e-36 123.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF28996 - 1.2e-20 74.1 0.0 1.6e-20 73.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF28996 - 5.5e-08 32.9 0.0 7.7e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF28996 - 0.02 14.3 0.7 0.056 12.8 0.7 1.7 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) Ferric_reduct PF01794.19 ORF27827 - 5.6e-08 33.0 6.5 5.6e-08 33.0 6.5 2.7 1 1 1 2 2 2 2 Ferric reductase like transmembrane component adh_short PF00106.25 ORF25930 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF25930 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF25930 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF25930 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF25930 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApoB100_C PF12491.8 ORF25665 - 0.024 14.6 0.2 0.054 13.5 0.2 1.5 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal DUF2730 PF10805.8 ORF25665 - 0.12 12.4 2.6 0.26 11.4 0.4 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2730) Spore_III_AB PF09548.10 ORF25665 - 0.2 11.7 1.2 11 6.1 0.4 2.5 2 0 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) RAMPs PF03787.15 ORF25665 - 0.6 10.1 5.3 2.6 8.0 5.3 2.2 1 1 0 1 1 1 0 RAMP superfamily DUF948 PF06103.11 ORF25665 - 1.4 9.2 5.3 12 6.3 0.5 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) ASPRs PF17641.2 ORF24592 - 0.076 13.3 1.6 0.17 12.1 1.3 1.8 1 1 0 1 1 1 0 Ancylostoma-associated secreted protein related KIX PF02172.16 ORF24592 - 0.25 11.7 4.1 0.41 11.0 0.1 3.1 3 0 0 3 3 3 0 KIX domain Sigma70_r1_1 PF03979.14 ORF24592 - 1.3 9.1 7.6 4.1 7.5 0.2 3.1 3 0 0 3 3 3 0 Sigma-70 factor, region 1.1 DUF1539 PF07560.11 ORF24592 - 4.2 7.5 10.7 2.7 8.1 1.3 3.1 1 1 2 3 3 3 0 Domain of Unknown Function (DUF1539) FGGY_C PF02782.16 ORF2311 - 4.9e-33 114.5 0.7 6.7e-33 114.1 0.7 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 ORF2311 - 8.3e-25 87.8 0.2 1.3e-24 87.2 0.2 1.3 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain NMO PF03060.15 ORF2311 - 0.0088 15.5 0.1 0.013 15.0 0.1 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase MSP PF01716.18 ORF22387 - 5.7e-83 277.8 0.3 6.8e-83 277.6 0.3 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide ASPRs PF17641.2 ORF2072 - 0.076 13.3 1.6 0.17 12.1 1.3 1.8 1 1 0 1 1 1 0 Ancylostoma-associated secreted protein related KIX PF02172.16 ORF2072 - 0.25 11.7 4.1 0.41 11.0 0.1 3.1 3 0 0 3 3 3 0 KIX domain Sigma70_r1_1 PF03979.14 ORF2072 - 1.3 9.1 7.6 4.1 7.5 0.2 3.1 3 0 0 3 3 3 0 Sigma-70 factor, region 1.1 DUF1539 PF07560.11 ORF2072 - 4.2 7.5 10.7 2.7 8.1 1.3 3.1 1 1 2 3 3 3 0 Domain of Unknown Function (DUF1539) ABM PF03992.16 ORF19828 - 7.1e-21 74.1 0.5 2.4e-11 43.6 0.3 2.7 2 1 0 2 2 2 2 Antibiotic biosynthesis monooxygenase SOR PF07682.11 ORF19828 - 0.01 14.8 0.0 1.5 7.6 0.0 2.1 2 0 0 2 2 2 2 Sulphur oxygenase reductase Peptidase_M24 PF00557.24 ORF19035 - 7.7e-46 156.4 0.0 9.1e-46 156.2 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Orthopox_F6 PF06601.12 ORF18631 - 0.022 14.9 1.2 0.13 12.4 0.2 2.5 1 1 1 2 2 2 0 Orthopoxvirus F6 protein Aa_trans PF01490.18 ORF17231 - 4.3e-28 98.1 8.3 4.9e-28 98.0 8.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein p450 PF00067.22 ORF1605 - 3.1e-49 168.0 0.4 3.6e-49 167.8 0.4 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF1325 PF07039.11 ORF14617 - 0.0031 17.6 0.1 1.1 9.3 0.0 3.0 3 0 0 3 3 3 2 SGF29 tudor-like domain DUF4926 PF16277.5 ORF14617 - 0.12 11.7 2.0 11 5.5 0.3 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4926) Tudor_3 PF18115.1 ORF14617 - 0.26 11.2 0.8 2 8.3 0.0 2.7 3 0 0 3 3 3 0 DNA repair protein Crb2 Tudor domain Acetyltransf_1 PF00583.25 ORF13069 - 2.6e-12 47.0 0.1 7.7e-12 45.5 0.1 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF13069 - 2.4e-11 43.7 0.1 8.1e-11 42.0 0.1 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF13069 - 5.6e-08 33.1 0.1 1.6e-07 31.6 0.1 1.9 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF13069 - 1.4e-05 24.9 0.0 3.4e-05 23.7 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF13069 - 0.0047 17.0 0.0 0.033 14.3 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF13069 - 0.063 13.4 0.1 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase NESP55 PF06390.12 ORF13069 - 0.12 11.9 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) Actin PF00022.19 ORF11802 - 3.9e-88 295.8 0.0 7.1e-87 291.6 0.0 1.9 1 1 0 1 1 1 1 Actin MFS_1 PF07690.16 ORF111948 - 2.5e-08 33.3 6.2 2.5e-08 33.3 6.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF2070 PF09843.9 ORF111948 - 0.039 12.3 3.9 0.047 12.0 3.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Tombus_P19 PF03220.13 ORF111948 - 0.16 11.6 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 Tombusvirus P19 core protein DUF2616 PF11077.8 ORF111140 - 0.017 14.8 2.2 0.031 14.0 2.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2616) DUF436 PF04260.12 ORF111140 - 0.086 12.4 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF436) Chloroa_b-bind PF00504.21 ORF109102 - 1.4e-43 149.2 0.1 2.7e-26 93.0 0.0 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein Androgen_recep PF02166.16 ORF109102 - 0.19 10.5 0.5 0.25 10.2 0.5 1.1 1 0 0 1 1 1 0 Androgen receptor SPOR PF05036.13 ORF105367 - 4.1e-13 49.5 0.1 9.1e-13 48.4 0.1 1.6 1 0 0 1 1 1 1 Sporulation related domain Asp PF00026.23 ORF102875 - 1.9e-18 67.0 0.1 2.4e-18 66.6 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF102875 - 0.03 14.1 0.0 0.048 13.4 0.0 1.3 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal Shisa PF13908.6 ORF102875 - 0.079 13.2 0.0 0.15 12.3 0.0 1.4 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Tweety PF04906.13 ORF102875 - 0.12 11.0 0.3 0.24 10.0 0.0 1.5 2 0 0 2 2 2 0 Tweety RCC1_2 PF13540.6 NODE_20368_length_970_cov_245.847059_g15619_i0reverse_frame_1 - 6.7e-07 29.0 24.1 0.27 11.1 0.1 7.4 7 0 0 7 7 7 4 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 NODE_20368_length_970_cov_245.847059_g15619_i0reverse_frame_1 - 0.17 11.8 2.7 3.2 7.7 0.0 2.9 2 2 1 3 3 3 0 Lipocalin / cytosolic fatty-acid binding protein family XRCC1_N PF01834.16 NODE_20368_length_970_cov_245.847059_g15619_i0reverse_frame_1 - 0.26 11.3 0.6 19 5.2 0.0 3.1 3 1 1 4 4 4 0 XRCC1 N terminal domain SHP PF03579.13 NODE_20299_length_972_cov_187.049093_g15564_i0reverse_frame_1 - 2.1 8.4 8.7 2 8.5 5.4 2.5 2 0 0 2 2 2 0 Small hydrophobic protein MyTH4 PF00784.17 NODE_20269_length_973_cov_152.828358_g15539_i0reverse_frame_3 - 9.5 6.8 18.3 10 6.7 0.1 5.0 4 1 0 5 5 5 0 MyTH4 domain RCC1_2 PF13540.6 NODE_20269_length_973_cov_152.828358_g15539_i0forward_frame_2 - 5.4e-05 22.9 8.3 0.93 9.4 0.1 3.7 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat CbiQ PF02361.16 NODE_20269_length_973_cov_152.828358_g15539_i0forward_frame_2 - 2.2 7.9 7.3 0.91 9.1 0.3 2.2 1 1 1 2 2 2 0 Cobalt transport protein FGFR3_TM PF18123.1 NODE_20269_length_973_cov_152.828358_g15539_i0forward_frame_2 - 2.8 7.5 10.8 2.6 7.7 1.9 2.5 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain ParBc PF02195.18 NODE_20245_length_974_cov_2.787007_g15518_i0forward_frame_3 - 0.096 13.0 0.9 0.26 11.6 0.0 2.1 2 0 0 2 2 2 0 ParB-like nuclease domain Death_2 PF14786.6 NODE_20244_length_974_cov_3.030884_g15517_i0reverse_frame_3 - 0.014 15.3 0.1 0.024 14.6 0.1 1.3 1 0 0 1 1 1 0 Tube Death domain HIP1_clath_bdg PF16515.5 NODE_20244_length_974_cov_3.030884_g15517_i0reverse_frame_2 - 8.5 7.1 15.4 2.5 8.8 9.3 2.9 2 1 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ATP-synt_8 PF00895.20 NODE_20230_length_974_cov_254.086262_g6969_i1forward_frame_3 - 3.5 8.2 7.8 6.3 7.4 1.4 3.1 2 0 0 2 2 2 0 ATP synthase protein 8 GBP_PSP PF02425.15 NODE_20218_length_975_cov_4.904255_g15495_i0reverse_frame_3 - 0.028 14.0 0.2 0.028 14.0 0.2 2.8 3 0 0 3 3 3 0 Paralytic/GBP/PSP peptide Ehrlichia_rpt PF09528.10 NODE_20202_length_975_cov_231.804255_g15480_i0forward_frame_2 - 0.46 10.0 0.1 0.46 10.0 0.1 2.2 2 0 0 2 2 2 0 Ehrlichia tandem repeat (Ehrlichia_rpt) Phage_holin_4_2 PF04020.13 NODE_20187_length_975_cov_1066.174468_g12243_i3forward_frame_3 - 1.7 9.4 10.6 0.6 10.8 5.1 2.6 2 1 1 3 3 3 0 Mycobacterial 4 TMS phage holin, superfamily IV # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks44.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks44.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks44.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks44.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DnaJ PF00226.31 ORF99770 - 9.4e-20 70.5 1.2 1.9e-19 69.6 1.2 1.5 1 0 0 1 1 1 1 DnaJ domain Sec63 PF02889.16 ORF99770 - 4.9e-07 29.2 0.4 7e-07 28.7 0.4 1.2 1 0 0 1 1 1 1 Sec63 Brl domain SCAMP PF04144.13 ORF99770 - 0.033 14.5 1.5 0.041 14.2 0.1 1.8 2 0 0 2 2 2 0 SCAMP family PspB PF06667.12 ORF99770 - 0.076 13.1 0.2 0.21 11.7 0.0 1.8 2 0 0 2 2 2 0 Phage shock protein B Biotin_carb_C PF02785.19 ORF97610 - 0.0043 17.1 0.0 0.0097 16.0 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Metallophos_2 PF12850.7 ORF97369 - 0.071 13.3 0.1 9 6.5 0.0 2.2 2 0 0 2 2 2 0 Calcineurin-like phosphoesterase superfamily domain TPR_1 PF00515.28 ORF97369 - 0.12 12.2 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat UQ_con PF00179.26 ORF96486 - 2.3e-14 53.2 0.0 3.9e-14 52.5 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme TctC PF03401.14 ORF95673 - 2.7e-58 197.2 0.0 3.4e-58 196.9 0.0 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter family receptor Phosphonate-bd PF12974.7 ORF95673 - 0.096 12.3 0.1 0.81 9.2 0.0 2.0 1 1 0 2 2 2 0 ABC transporter, phosphonate, periplasmic substrate-binding protein A_deaminase PF00962.22 ORF92936 - 8.7e-36 123.9 0.0 1.2e-35 123.5 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase Rsa3 PF14615.6 ORF92936 - 0.0037 16.8 0.1 1.1 8.9 0.0 2.6 2 0 0 2 2 2 2 Ribosome-assembly protein 3 Phe_ZIP PF08916.11 ORF91215 - 0.07 13.8 2.4 1.1 10.1 0.2 2.3 2 0 0 2 2 2 0 Phenylalanine zipper Nramp PF01566.18 ORF88355 - 1e-60 205.6 5.3 1.3e-60 205.3 5.3 1.0 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein DUF4834 PF16118.5 ORF87187 - 3 8.9 11.4 4.2 8.4 0.2 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Peptidase_S49_N PF08496.10 ORF87187 - 9 6.3 10.3 26 4.8 0.1 2.6 2 0 0 2 2 2 0 Peptidase family S49 N-terminal NolX PF05819.11 ORF86601 - 0.12 11.7 5.0 0.042 13.2 2.0 1.6 2 0 0 2 2 2 0 NolX protein Ldh_1_N PF00056.23 ORF79437 - 6.7e-37 126.7 0.1 1.2e-36 125.9 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF79437 - 1.7e-28 99.7 0.0 2.5e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Pkinase PF00069.25 ORF78646 - 3.5e-55 187.2 0.0 4.9e-55 186.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78646 - 3.1e-20 72.6 0.1 1.4e-19 70.4 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF78646 - 7.5e-05 22.8 0.0 0.00046 20.2 0.0 1.9 2 0 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF78646 - 0.029 13.7 0.0 0.042 13.2 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF78646 - 0.034 13.7 0.1 0.061 12.9 0.1 1.4 1 0 0 1 1 1 0 Choline/ethanolamine kinase RIO1 PF01163.22 ORF78646 - 0.072 12.7 0.1 0.15 11.6 0.1 1.5 1 1 0 1 1 1 0 RIO1 family EamA PF00892.20 ORF71314 - 5e-22 78.5 29.6 1.3e-15 57.8 9.8 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF3611 PF12263.8 ORF71314 - 0.34 10.8 9.4 0.033 14.1 1.7 3.0 2 2 0 2 2 2 0 Protein of unknown function (DUF3611) DUF2070 PF09843.9 ORF71314 - 1.1 7.5 15.1 0.28 9.4 6.7 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) TMEM100 PF16311.5 ORF71314 - 7.7 6.1 8.7 1.4 8.5 0.1 3.0 3 0 0 3 3 3 0 Transmembrane protein 100 Reprolysin_5 PF13688.6 ORF67653 - 0.12 12.5 0.5 0.18 11.9 0.5 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 Exo5 PF09810.9 ORF67653 - 0.15 11.5 4.0 0.2 11.1 4.0 1.2 1 0 0 1 1 1 0 Exonuclease V - a 5' deoxyribonuclease SKA2 PF16740.5 ORF67653 - 0.17 11.7 0.0 0.17 11.7 0.0 2.7 3 0 0 3 3 3 0 Spindle and kinetochore-associated protein 2 Spt20 PF12090.8 ORF67653 - 0.27 10.8 15.9 0.56 9.8 15.9 1.5 1 0 0 1 1 1 0 Spt20 family DUF3584 PF12128.8 ORF67653 - 0.28 8.6 17.3 0.41 8.1 17.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Exonuc_VII_L PF02601.15 ORF67653 - 0.46 10.0 8.4 0.8 9.2 8.4 1.5 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4094 PF13334.6 ORF67653 - 2.6 8.5 7.0 0.45 11.0 2.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) peroxidase PF00141.23 ORF59736 - 5.7e-23 81.8 0.0 8.2e-23 81.3 0.0 1.2 1 0 0 1 1 1 1 Peroxidase Aldo_ket_red PF00248.21 ORF58267 - 1.1e-36 126.6 0.1 3.2e-36 125.0 0.1 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family Mid2 PF04478.12 ORF57060 - 0.02 14.7 2.2 0.02 14.7 2.2 1.9 2 0 0 2 2 2 0 Mid2 like cell wall stress sensor He_PIG PF05345.12 ORF57060 - 0.068 13.4 10.9 0.071 13.3 5.3 3.1 2 1 0 2 2 2 0 Putative Ig domain peroxidase PF00141.23 ORF52128 - 5.7e-23 81.8 0.0 8.2e-23 81.3 0.0 1.2 1 0 0 1 1 1 1 Peroxidase Ank_4 PF13637.6 ORF51517 - 6.1e-24 84.1 2.5 3e-09 37.3 0.2 3.3 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF51517 - 1.6e-19 70.3 0.0 8.9e-15 55.1 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF51517 - 2.2e-18 66.1 0.5 2.2e-12 46.9 0.0 4.1 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF51517 - 3e-16 59.0 1.5 1.1e-06 28.8 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF51517 - 3.4e-14 51.5 0.1 3.1e-05 24.0 0.0 4.2 5 0 0 5 5 5 3 Ankyrin repeat WW PF00397.26 ORF51517 - 0.024 14.7 0.4 0.059 13.5 0.4 1.7 1 0 0 1 1 1 0 WW domain BTB PF00651.31 ORF48780 - 1.8e-09 37.8 0.0 3.8e-09 36.8 0.0 1.5 1 1 0 1 1 1 1 BTB/POZ domain V_ATPase_I PF01496.19 ORF44387 - 0.0043 15.0 15.3 0.011 13.7 5.2 2.0 2 0 0 2 2 2 2 V-type ATPase 116kDa subunit family DivIC PF04977.15 ORF44387 - 0.07 12.9 21.8 0.1 12.4 6.2 3.9 3 1 1 4 4 4 0 Septum formation initiator GAS PF13851.6 ORF44387 - 0.13 11.6 19.8 0.66 9.3 3.9 2.4 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF44387 - 0.16 12.2 12.5 0.42 10.9 0.4 2.5 3 0 0 3 3 3 0 Zinc finger-containing protein DUF3368 PF11848.8 ORF44387 - 0.16 11.7 0.1 0.42 10.4 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3368) PRKG1_interact PF15898.5 ORF44387 - 0.37 11.7 23.8 0.65 10.9 5.4 2.9 3 0 0 3 3 3 0 cGMP-dependent protein kinase interacting domain Cep57_CLD_2 PF14197.6 ORF44387 - 0.56 10.3 11.7 2 8.6 0.2 3.2 3 1 0 3 3 3 0 Centrosome localisation domain of PPC89 DUF3450 PF11932.8 ORF44387 - 0.72 9.1 21.8 0.096 12.0 4.2 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) CENP-F_leu_zip PF10473.9 ORF44387 - 1 9.4 26.3 0.8 9.7 12.1 2.4 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 APG6_N PF17675.1 ORF44387 - 1.2 9.7 26.8 0.72 10.4 3.5 3.0 2 1 1 3 3 3 0 Apg6 coiled-coil region DUF724 PF05266.14 ORF44387 - 1.6 8.5 24.1 0.98 9.2 8.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF724) ADIP PF11559.8 ORF44387 - 2.1 8.4 18.3 3.8 7.6 1.4 3.2 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding UPF0242 PF06785.11 ORF44387 - 2.6 8.1 16.2 4.9 7.2 7.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Golgin_A5 PF09787.9 ORF44387 - 5.7 6.3 24.5 1 8.8 11.7 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 UPF0515 PF15135.6 ORF44387 - 6.3 6.1 11.4 0.36 10.2 3.2 2.0 2 0 0 2 2 2 0 Uncharacterised protein UPF0515 Fez1 PF06818.15 ORF44387 - 6.5 7.1 25.8 7.1 7.0 11.5 2.5 1 1 1 2 2 2 0 Fez1 Csm1_N PF18504.1 ORF44387 - 7.5 7.0 17.1 12 6.4 0.3 4.0 3 1 1 4 4 4 0 Csm1 N-terminal domain ADH_zinc_N PF00107.26 ORF44205 - 3.9e-14 52.7 0.1 7.4e-14 51.9 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF44205 - 3.3e-05 23.7 0.1 0.0002 21.2 0.0 2.3 2 1 1 3 3 3 1 Alcohol dehydrogenase GroES-like domain adh_short PF00106.25 ORF44205 - 0.00067 19.2 0.1 0.0012 18.4 0.1 1.3 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 ORF44205 - 0.00087 18.8 0.1 0.0016 17.9 0.1 1.5 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family AlaDh_PNT_C PF01262.21 ORF44205 - 0.0017 17.7 1.0 0.0026 17.1 1.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ELFV_dehydrog PF00208.21 ORF44205 - 0.0091 15.7 0.5 0.015 15.1 0.5 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DapB_N PF01113.20 ORF44205 - 0.011 15.8 0.1 0.81 9.8 0.0 2.4 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus AAA_28 PF13521.6 ORF44205 - 0.057 13.7 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain THF_DHG_CYH_C PF02882.19 ORF44205 - 0.11 11.8 0.1 0.27 10.5 0.1 1.6 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GDP_Man_Dehyd PF16363.5 ORF44205 - 0.14 11.5 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase NmrA PF05368.13 ORF44205 - 0.17 11.4 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Phage_holin_3_3 PF16083.5 ORF44205 - 6 7.1 7.5 0.34 11.1 1.6 2.0 2 0 0 2 2 2 0 LydA holin phage, holin superfamily III Ldh_1_N PF00056.23 ORF43602 - 6.7e-37 126.7 0.1 1.2e-36 125.9 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF43602 - 1.7e-28 99.7 0.0 2.5e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Totivirus_coat PF05518.11 ORF41349 - 0.24 9.4 1.3 0.31 9.0 1.3 1.1 1 0 0 1 1 1 0 Totivirus coat protein PBD PF00786.28 ORF41349 - 0.56 10.6 0.0 0.56 10.6 0.0 3.3 3 1 0 3 3 3 0 P21-Rho-binding domain adh_short PF00106.25 ORF39673 - 4.5e-37 127.4 0.3 6.1e-37 127.0 0.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF39673 - 8.3e-19 68.1 0.0 1.1e-18 67.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF39673 - 4.1e-07 30.1 0.0 6.4e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 KR domain DUF2251 PF10008.9 ORF39673 - 0.054 13.6 0.3 0.33 11.1 0.0 2.3 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2251) DUF1189 PF06691.11 ORF39673 - 0.28 10.7 2.6 0.38 10.3 1.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1189) peroxidase PF00141.23 ORF38285 - 5.7e-23 81.8 0.0 8.2e-23 81.3 0.0 1.2 1 0 0 1 1 1 1 Peroxidase Inhibitor_I34 PF10466.9 ORF30504 - 0.055 14.1 1.9 0.055 14.1 1.9 2.5 1 1 1 2 2 2 0 Saccharopepsin inhibitor I34 Linker_histone PF00538.19 ORF30504 - 0.29 11.5 6.1 0.95 9.9 2.9 2.6 2 0 0 2 2 2 0 linker histone H1 and H5 family Ldh_1_N PF00056.23 ORF26471 - 6.7e-37 126.7 0.1 1.2e-36 125.9 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF26471 - 1.7e-28 99.7 0.0 2.5e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain adh_short PF00106.25 ORF26460 - 1.7e-36 125.5 0.2 2.2e-36 125.1 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF26460 - 7.4e-19 68.2 0.0 9e-19 67.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF26460 - 5.4e-07 29.7 0.0 7.4e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF26460 - 0.0036 17.2 0.1 0.006 16.5 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 ORF26460 - 0.018 14.7 0.0 0.032 13.9 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.6 ORF26460 - 0.062 13.2 0.0 0.095 12.6 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding ThrE PF06738.12 ORF15658 - 0.15 11.4 2.3 0.29 10.5 2.3 1.4 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF3447 PF11929.8 ORF15658 - 0.18 11.8 2.2 2 8.5 2.2 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3447) Calreticulin PF00262.18 ORF15441 - 0.0051 15.7 4.3 0.0084 15.0 4.3 1.3 1 0 0 1 1 1 1 Calreticulin family CoA_binding PF02629.19 ORF12319 - 1.3e-29 102.7 0.3 1.3e-29 102.7 0.3 2.3 3 0 0 3 3 3 1 CoA binding domain Ligase_CoA PF00549.19 ORF12319 - 1.6e-23 83.2 0.1 2.6e-23 82.6 0.1 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 ORF12319 - 6e-10 39.1 0.0 1.1e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 ORF12319 - 0.012 16.1 0.0 0.046 14.2 0.1 2.0 3 0 0 3 3 3 0 CoA binding domain PEP-utilizers_C PF02896.18 ORF110088 - 1.7e-74 250.6 0.1 1.9e-74 250.4 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain SH3_2 PF07653.17 ORF107267 - 0.003 17.2 0.0 0.072 12.8 0.0 2.3 2 0 0 2 2 2 2 Variant SH3 domain Aldo_ket_red PF00248.21 ORF106339 - 2.1e-74 250.4 0.0 2.6e-74 250.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family HMMR_N PF15905.5 ORF102979 - 0.061 12.8 7.2 0.11 12.0 7.2 1.4 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DIT1_PvcA PF05141.12 ORF102979 - 0.07 12.6 3.4 0.14 11.6 3.4 1.5 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein 5_3_exonuc_N PF02739.16 ORF102979 - 0.11 12.4 1.7 0.21 11.5 1.4 1.6 1 1 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain UPF0242 PF06785.11 ORF102979 - 0.2 11.7 12.6 0.33 11.0 8.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Atg14 PF10186.9 ORF102979 - 0.35 9.9 5.7 0.56 9.2 5.7 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 GrpE PF01025.19 ORF102979 - 0.48 10.1 11.9 3.6 7.2 9.6 2.7 3 1 0 3 3 3 0 GrpE FAM76 PF16046.5 ORF102979 - 1.3 8.3 9.3 0.96 8.7 6.0 2.0 1 1 1 2 2 2 0 FAM76 protein HR1 PF02185.16 ORF102979 - 1.4 9.1 11.4 0.91 9.7 5.6 3.3 3 1 0 3 3 3 0 Hr1 repeat ALAD PF00490.21 ORF102958 - 1.4e-136 454.8 0.3 1.6e-136 454.6 0.3 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase ComA PF02679.15 ORF102958 - 0.027 13.9 0.1 0.061 12.8 0.0 1.7 2 1 0 2 2 2 0 (2R)-phospho-3-sulfolactate synthase (ComA) PUB PF09409.10 ORF102582 - 3.4e-14 52.5 0.1 1.4e-13 50.6 0.1 2.0 3 0 0 3 3 3 1 PUB domain UBA PF00627.31 ORF102582 - 3.5e-08 33.2 0.0 6.4e-08 32.3 0.0 1.5 1 0 0 1 1 1 1 UBA/TS-N domain UPF0242 PF06785.11 ORF102582 - 4.5 7.3 19.1 7 6.7 19.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FAM75 PF14650.6 ORF102582 - 9 5.7 11.7 13 5.2 11.7 1.2 1 0 0 1 1 1 0 FAM75 family Ldh_1_N PF00056.23 ORF100611 - 6.7e-37 126.7 0.1 1.2e-36 125.9 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF100611 - 1.7e-28 99.7 0.0 2.5e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain WW PF00397.26 ORF100065 - 0.091 12.9 0.5 0.18 11.9 0.5 1.5 1 0 0 1 1 1 0 WW domain DUF4014 PF13198.6 NODE_20406_length_969_cov_53.967880_g15652_i0reverse_frame_1 - 1 9.8 4.5 0.71 10.3 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4014) UPF0047 PF01894.17 NODE_20368_length_970_cov_245.847059_g15619_i0forward_frame_3 - 0.0034 17.5 0.0 27 5.0 0.0 4.5 2 2 3 5 5 5 1 Uncharacterised protein family UPF0047 Lar_restr_allev PF14354.6 NODE_20368_length_970_cov_245.847059_g15619_i0forward_frame_3 - 1.9 8.9 9.3 1.1e+02 3.2 6.6 3.4 2 1 0 2 2 2 0 Restriction alleviation protein Lar DUF3175 PF11373.8 NODE_20349_length_971_cov_3.194444_g15604_i0reverse_frame_2 - 0.11 12.7 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3175) Usher PF00577.20 NODE_20349_length_971_cov_3.194444_g15604_i0forward_frame_2 - 6.4e-56 190.4 8.5 7.5e-56 190.1 8.5 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 NODE_20349_length_971_cov_3.194444_g15604_i0forward_frame_2 - 7.2e-13 48.2 0.0 2.5e-12 46.4 0.0 2.0 1 0 0 1 1 1 1 PapC C-terminal domain LMBR1 PF04791.16 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_3 - 0.19 10.6 3.5 0.3 9.9 3.5 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein zf-RING_2 PF13639.6 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 2.4e-07 31.0 5.1 4.5e-07 30.1 5.1 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 2.5e-06 27.4 4.3 5.5e-06 26.3 4.3 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 2.5e-05 24.5 5.0 4.9e-05 23.5 5.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.00026 20.8 5.0 0.00055 19.7 5.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.00042 20.1 5.3 0.00084 19.2 5.3 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.0013 18.8 4.0 0.0025 17.9 4.0 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.0015 18.5 4.8 0.0053 16.7 4.9 1.8 1 1 1 2 2 2 1 zinc-RING finger domain zf-RING_11 PF17123.5 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.0025 17.5 5.4 0.0048 16.6 5.4 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.0032 17.5 1.2 0.0061 16.6 1.2 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.0069 16.0 2.5 0.011 15.3 2.5 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Rota_VP4_MID PF17477.2 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.016 14.6 0.1 0.026 13.9 0.1 1.2 1 0 0 1 1 1 0 Rotavirus VP4 membrane interaction domain zf-C3HC4_3 PF13920.6 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.021 14.7 3.1 0.034 14.0 3.1 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) U-box PF04564.15 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.03 14.5 0.0 0.077 13.2 0.0 1.7 1 0 0 1 1 1 0 U-box domain RINGv PF12906.7 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.031 14.4 2.0 0.057 13.5 2.0 1.4 1 0 0 1 1 1 0 RING-variant domain Prok-RING_4 PF14447.6 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 0.06 13.2 2.9 0.11 12.4 2.9 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING-like PF08746.11 NODE_20299_length_972_cov_187.049093_g15564_i0forward_frame_2 - 1.1 9.7 3.9 1.8 8.9 3.9 1.4 1 0 0 1 1 1 0 RING-like domain Voltage_CLC PF00654.20 ORF98835 - 1.3e-21 77.3 8.1 1.9e-21 76.7 8.1 1.2 1 0 0 1 1 1 1 Voltage gated chloride channel CBS PF00571.28 ORF98835 - 2.4e-08 34.3 0.0 0.00037 20.9 0.0 2.5 2 0 0 2 2 2 2 CBS domain Calcyon PF06387.11 ORF97578 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) DUF2462 PF09495.10 ORF95877 - 0.32 11.8 4.7 0.61 10.9 3.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2462) Sulf_transp PF04143.14 ORF94501 - 2.6e-15 56.8 6.9 2.6e-15 56.8 6.9 3.2 2 1 1 3 3 3 3 Sulphur transport DUF4586 PF15239.6 ORF91294 - 1.1e-26 94.8 17.9 1.6e-26 94.2 17.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4586) VWD PF00094.25 ORF91088 - 0.00031 21.1 0.0 0.0021 18.4 0.0 2.2 1 1 0 1 1 1 1 von Willebrand factor type D domain Dpy-30 PF05186.13 ORF90182 - 2.7e-09 36.6 0.0 5.1e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 Dpy-30 motif ADK PF00406.22 ORF90182 - 4.7e-06 26.8 0.1 3.3e-05 24.0 0.0 2.2 2 0 0 2 2 2 1 Adenylate kinase Hydin_ADK PF17213.3 ORF90182 - 0.061 13.6 0.2 0.43 10.8 0.0 2.2 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain CS PF04969.16 ORF88445 - 0.0013 19.7 0.5 0.0038 18.2 0.0 2.1 2 1 0 2 2 2 1 CS domain adh_short PF00106.25 ORF7091 - 4.2e-24 85.1 0.0 7e-21 74.6 0.0 2.4 3 0 0 3 3 3 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF7091 - 8.1e-15 55.0 0.0 2.3e-12 47.0 0.0 2.2 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF7091 - 0.00018 21.5 0.0 0.00031 20.7 0.0 1.4 1 0 0 1 1 1 1 KR domain DUF3601 PF12208.8 ORF6859 - 0.0074 16.4 0.0 0.016 15.3 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3601) Myb_DNA-binding PF00249.31 ORF67644 - 2.8e-16 59.4 0.9 1e-09 38.4 0.1 3.6 4 0 0 4 4 4 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF67644 - 1.1e-08 35.2 10.3 3.4e-06 27.2 0.3 4.3 3 1 1 4 4 4 3 Myb-like DNA-binding domain P22_AR_C PF10548.9 ORF67644 - 0.0031 17.7 0.1 0.0079 16.3 0.1 1.7 1 0 0 1 1 1 1 P22AR C-terminal domain NAAA-beta PF15508.6 ORF67644 - 0.03 14.6 1.8 0.45 10.9 0.0 3.2 4 0 0 4 4 4 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase zf-RanBP PF00641.18 ORF66090 - 4.1e-16 58.0 19.8 1.5e-09 37.0 4.3 2.5 2 0 0 2 2 2 2 Zn-finger in Ran binding protein and others zinc_ribbon_10 PF10058.9 ORF66090 - 0.028 14.1 1.1 5.9 6.7 0.2 2.6 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein TackOD1 PF18551.1 ORF66090 - 0.036 13.7 4.9 1.8 8.2 0.2 2.2 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 HypA PF01155.19 ORF66090 - 0.054 13.5 4.3 1.1 9.2 0.2 2.3 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbon_6 PF10005.9 ORF66090 - 0.18 12.5 4.7 6.5 7.5 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-MIZ PF02891.20 ORF66090 - 0.3 10.9 4.6 8.6 6.2 0.3 2.4 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger DZR PF12773.7 ORF66090 - 0.31 11.1 13.4 1.4 9.0 13.8 1.9 1 1 1 2 2 2 0 Double zinc ribbon zf-4CXXC_R1 PF10497.9 ORF66090 - 1.5 9.1 15.3 4 7.7 4.2 2.5 1 1 1 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 zf-ACC PF17848.1 ORF66090 - 1.7 8.8 10.0 8 6.6 0.0 3.8 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain DUF35_N PF12172.8 ORF66090 - 2.1 8.3 13.8 0.49 10.3 4.2 2.5 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Ima1_N PF09779.9 ORF66090 - 2.9 8.8 6.4 3.7 8.4 0.5 2.3 2 0 0 2 2 2 0 Ima1 N-terminal domain Rubredoxin_2 PF18073.1 ORF66090 - 4.8 7.0 15.9 4.4 7.1 0.7 4.3 4 0 0 4 4 4 0 Rubredoxin metal binding domain zinc_ribbon_15 PF17032.5 ORF66090 - 7.1 7.5 8.2 26 5.6 8.3 1.8 1 1 1 2 2 2 0 zinc-ribbon family zf-RRN7 PF11781.8 ORF66090 - 9.4 6.0 16.6 1.7 8.4 0.7 3.6 3 1 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-FPG_IleRS PF06827.14 ORF66090 - 9.8 6.1 12.5 10 6.1 0.1 4.1 5 0 0 5 5 5 0 Zinc finger found in FPG and IleRS VWD PF00094.25 ORF64651 - 0.00031 21.1 0.0 0.0021 18.4 0.0 2.2 1 1 0 1 1 1 1 von Willebrand factor type D domain TRP PF06011.12 ORF62527 - 8.4e-07 28.1 7.6 8.4e-07 28.1 7.6 1.5 2 0 0 2 2 2 1 Transient receptor potential (TRP) ion channel DUF365 PF04033.12 ORF62527 - 0.22 11.8 5.2 0.065 13.5 1.3 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF365) Sdh_cyt PF01127.22 ORF62527 - 1.2 9.2 9.9 0.048 13.7 3.7 1.9 3 0 0 3 3 3 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Hydrolase_4 PF12146.8 ORF61934 - 1.5e-51 175.0 0.0 1.8e-51 174.7 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF61934 - 4.9e-11 42.8 0.7 3.5e-06 26.9 0.8 2.4 2 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF61934 - 0.00014 22.6 2.2 0.0002 22.0 2.2 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 ORF61934 - 0.0047 16.6 0.0 0.0061 16.2 0.0 1.3 1 0 0 1 1 1 1 Putative esterase ACT_7 PF13840.6 ORF61934 - 0.052 13.4 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 ACT domain Abhydrolase_2 PF02230.16 ORF61934 - 0.085 12.7 0.2 0.41 10.4 0.1 1.9 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Chlorophyllase2 PF12740.7 ORF61934 - 0.18 10.7 0.0 0.82 8.5 0.0 1.9 2 0 0 2 2 2 0 Chlorophyllase enzyme Peptidase_S9 PF00326.21 ORF61934 - 0.25 10.8 2.1 1.3 8.5 1.0 2.5 2 1 1 3 3 3 0 Prolyl oligopeptidase family ERp29_N PF07912.13 ORF59103 - 5.3e-16 58.9 0.0 1.1e-15 57.9 0.0 1.5 1 0 0 1 1 1 1 ERp29, N-terminal domain ERp29 PF07749.12 ORF59103 - 5.8e-15 56.0 0.6 1e-14 55.2 0.6 1.4 1 0 0 1 1 1 1 Endoplasmic reticulum protein ERp29, C-terminal domain Pkinase PF00069.25 ORF56844 - 4.9e-41 140.8 0.0 6.5e-41 140.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF56844 - 4.8e-23 81.8 0.0 6.5e-23 81.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF56844 - 2.3e-07 30.0 0.0 3.3e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF56844 - 0.00063 19.2 0.0 0.081 12.2 0.0 2.1 2 0 0 2 2 2 2 Kinase-like APH PF01636.23 ORF56844 - 0.0065 16.4 0.5 0.0065 16.4 0.5 2.4 2 1 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF56844 - 0.057 12.8 0.0 0.094 12.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family BBL5 PF07289.11 ORF56626 - 2.6e-136 454.1 0.9 2.9e-136 453.9 0.9 1.0 1 0 0 1 1 1 1 Bardet-Biedl syndrome 5 protein Vps36_ESCRT-II PF11605.8 ORF56626 - 0.00029 20.9 0.1 0.0091 16.2 0.1 2.4 2 0 0 2 2 2 1 Vacuolar protein sorting protein 36 Vps36 bPH_3 PF14470.6 ORF56626 - 0.00039 20.7 0.1 0.22 11.9 0.0 2.4 2 0 0 2 2 2 2 Bacterial PH domain Voldacs PF03517.13 ORF56626 - 0.013 15.7 0.1 1.1 9.4 0.0 2.6 2 0 0 2 2 2 0 Regulator of volume decrease after cellular swelling PH_TFIIH PF08567.11 ORF56626 - 0.13 12.6 0.0 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 TFIIH p62 subunit, N-terminal domain AAA_lid_6 PF17866.1 ORF56485 - 1.1e-17 63.9 0.4 1e-12 48.1 0.2 3.3 3 0 0 3 3 3 2 AAA lid domain AAA PF00004.29 ORF56485 - 5.1e-17 62.5 0.0 1.1e-16 61.5 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF56485 - 2e-05 24.9 0.1 0.22 11.8 0.0 2.6 1 1 0 2 2 2 2 AAA domain AAA_30 PF13604.6 ORF56485 - 7.7e-05 22.5 0.5 0.00016 21.4 0.5 1.5 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.12 ORF56485 - 8.9e-05 22.3 0.3 0.00044 20.0 0.3 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 ORF56485 - 0.00072 19.0 0.6 0.02 14.3 0.1 2.3 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 ORF56485 - 0.0014 18.7 0.2 0.0059 16.6 0.1 2.2 1 1 1 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF56485 - 0.002 18.6 0.2 0.0056 17.1 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF56485 - 0.009 16.2 0.5 0.13 12.4 0.1 2.4 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 ORF56485 - 0.0097 15.6 0.2 0.51 10.0 0.2 2.3 1 1 0 1 1 1 1 Sigma-54 interaction domain NTPase_1 PF03266.15 ORF56485 - 0.028 14.3 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 NTPase AAA_18 PF13238.6 ORF56485 - 0.037 14.6 0.2 0.17 12.5 0.0 2.2 3 0 0 3 3 3 0 AAA domain AAA_2 PF07724.14 ORF56485 - 0.044 13.9 0.0 0.095 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_19 PF13245.6 ORF56485 - 0.072 13.4 0.3 0.2 12.0 0.3 1.7 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF56485 - 0.077 12.9 0.1 0.19 11.6 0.1 1.7 1 0 0 1 1 1 0 NACHT domain Torsin PF06309.11 ORF56485 - 0.098 12.8 0.0 0.22 11.7 0.0 1.7 1 0 0 1 1 1 0 Torsin DinB_2 PF12867.7 ORF51258 - 0.0087 16.6 3.5 0.29 11.6 0.0 2.5 1 1 1 2 2 2 1 DinB superfamily PAM2 PF07145.15 ORF51258 - 0.013 15.1 0.1 0.031 14.0 0.1 1.6 1 0 0 1 1 1 0 Ataxin-2 C-terminal region DUF4407 PF14362.6 ORF51258 - 0.089 12.1 7.8 0.52 9.6 7.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) NPV_P10 PF05531.12 ORF51258 - 0.21 12.1 6.0 1.6 9.2 0.8 3.2 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein SlyX PF04102.12 ORF51258 - 1.2 9.8 10.9 2 9.1 0.4 3.6 2 2 1 3 3 3 0 SlyX SKA2 PF16740.5 ORF51258 - 1.3 8.8 9.0 0.094 12.5 1.3 2.7 2 1 1 3 3 3 0 Spindle and kinetochore-associated protein 2 DUF948 PF06103.11 ORF51258 - 1.4 9.3 4.6 3.8 7.8 0.8 2.8 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Syntaxin_2 PF14523.6 ORF51258 - 1.8 9.0 7.5 1.1 9.6 2.5 2.5 1 1 2 3 3 3 0 Syntaxin-like protein Exonuc_VII_L PF02601.15 ORF51258 - 3.4 7.1 12.3 13 5.3 12.3 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit Filament PF00038.21 ORF51258 - 3.6 7.1 10.1 2.6 7.6 2.4 2.2 2 0 0 2 2 2 0 Intermediate filament protein Fib_alpha PF08702.10 ORF51258 - 3.6 7.7 6.7 2.8 8.1 1.7 2.2 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF51258 - 5.7 7.3 6.6 33 4.9 0.3 2.9 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Vps5 PF09325.10 ORF51258 - 8 5.9 9.6 0.72 9.4 0.4 2.7 2 1 1 3 3 3 0 Vps5 C terminal like DAO PF01266.24 ORF51226 - 7.9e-24 84.9 0.0 9.8e-24 84.6 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Calcyon PF06387.11 ORF50209 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) Calcyon PF06387.11 ORF49222 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) Neurochondrin PF05536.11 ORF46157 - 0.0015 17.0 1.6 0.0024 16.3 0.7 1.8 1 1 0 1 1 1 1 Neurochondrin SWIRM PF04433.17 ORF46157 - 0.02 15.2 1.8 0.14 12.5 0.2 2.5 2 0 0 2 2 2 0 SWIRM domain PCP PF02429.15 ORF46157 - 0.034 14.5 0.4 0.38 11.1 0.2 2.3 2 0 0 2 2 2 0 Peridinin-chlorophyll A binding protein DUF3730 PF12530.8 ORF46157 - 0.054 13.1 0.1 5.8 6.4 0.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3730) DSPc PF00782.20 ORF46157 - 0.068 13.0 0.4 0.068 13.0 0.4 2.3 2 1 1 3 3 3 0 Dual specificity phosphatase, catalytic domain DUF4535 PF15054.6 ORF46157 - 0.18 11.6 0.2 0.18 11.6 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) SoPB_HTH PF18090.1 ORF45051 - 2.1e-42 143.2 0.1 3.7e-42 142.3 0.1 1.4 1 0 0 1 1 1 1 Centromere-binding protein HTH domain ParBc PF02195.18 ORF45051 - 4.7e-11 42.8 0.0 9.3e-11 41.9 0.0 1.5 1 0 0 1 1 1 1 ParB-like nuclease domain Calcyon PF06387.11 ORF4451 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) PP2C PF00481.21 ORF44502 - 3.2e-39 135.1 0.0 5.5e-39 134.3 0.0 1.4 1 1 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF44502 - 0.0075 15.9 0.0 0.017 14.7 0.0 1.7 1 1 0 1 1 1 1 Protein phosphatase 2C HTH_34 PF13601.6 ORF44502 - 0.11 12.7 0.1 0.26 11.5 0.1 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain Ribosomal_L3 PF00297.22 ORF41292 - 4.8e-17 62.0 4.9 2.4e-16 59.7 4.9 1.9 1 1 0 1 1 1 1 Ribosomal protein L3 MethyTransf_Reg PF10119.9 ORF35327 - 0.0099 16.6 0.1 0.098 13.4 0.0 2.4 3 0 0 3 3 3 1 Predicted methyltransferase regulatory domain Calcyon PF06387.11 ORF30966 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) PI3_PI4_kinase PF00454.27 ORF29248 - 9.9e-40 136.9 0.2 1.4e-39 136.4 0.2 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DSPc PF00782.20 ORF2663 - 3.3e-26 91.7 0.0 4.8e-26 91.2 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 ORF2663 - 0.0016 18.6 0.1 0.0027 17.8 0.1 1.4 1 1 0 1 1 1 1 Inositol hexakisphosphate Init_tRNA_PT PF04179.12 ORF2663 - 0.0037 17.5 0.0 0.007 16.7 0.0 1.3 1 0 0 1 1 1 1 Rit1 DUSP-like domain Y_phosphatase PF00102.27 ORF2663 - 0.02 14.5 0.0 0.029 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Afi1 PF07792.12 ORF2663 - 0.12 12.8 0.4 0.19 12.2 0.4 1.3 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking MSSP PF03940.13 ORF2663 - 3.6 7.2 36.3 2.9 7.5 11.8 2.7 1 1 1 2 2 2 0 Male specific sperm protein PALP PF00291.25 ORF2314 - 3.4e-69 233.5 0.3 3.8e-69 233.3 0.3 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DFP PF04127.15 ORF2314 - 0.03 14.1 0.1 0.056 13.3 0.1 1.3 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein ADH_zinc_N PF00107.26 ORF2314 - 0.038 14.0 0.9 0.44 10.5 0.5 2.5 2 1 0 2 2 2 0 Zinc-binding dehydrogenase PG_isomerase_N PF18353.1 ORF2314 - 0.094 13.1 0.0 0.25 11.8 0.0 1.8 1 1 0 1 1 1 0 Phosphoglucose isomerase N-terminal domain SUR7 PF06687.12 ORF21210 - 8.3e-05 22.3 2.5 0.0066 16.1 2.5 2.1 1 1 0 1 1 1 1 SUR7/PalI family Sigma_reg_N PF13800.6 ORF21210 - 0.013 15.8 4.9 0.86 9.9 0.2 3.2 3 0 0 3 3 3 0 Sigma factor regulator N-terminal SdpI PF13630.6 ORF21210 - 0.029 14.5 0.1 0.029 14.5 0.1 3.1 3 0 0 3 3 3 0 SdpI/YhfL protein family Orf78 PF06024.12 ORF21210 - 0.07 13.4 2.0 11 6.4 0.0 2.6 3 0 0 3 3 3 0 Orf78 (ac78) MFS_Mycoplasma PF07672.13 ORF21210 - 0.093 12.0 5.3 0.7 9.1 0.1 2.5 3 0 0 3 3 3 0 Mycoplasma MFS transporter DUF2207 PF09972.9 ORF21210 - 0.33 9.7 8.2 4 6.1 0.1 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF21210 - 0.44 10.9 11.1 4.2 7.7 0.4 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) DUF4834 PF16118.5 ORF21210 - 3.9 8.5 11.2 3.1 8.8 0.2 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) SOR_SNZ PF01680.17 ORF18188 - 6.7e-107 355.9 7.2 6.7e-107 355.9 7.2 1.5 2 0 0 2 2 2 1 SOR/SNZ family ThiG PF05690.14 ORF18188 - 2.9e-11 43.2 4.5 9.2e-08 31.7 0.3 2.5 2 1 0 2 2 2 2 Thiazole biosynthesis protein ThiG NanE PF04131.14 ORF18188 - 1.2e-05 24.6 0.7 0.0037 16.5 0.0 2.5 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase TetR_C_27 PF17935.1 ORF18188 - 3.3e-05 23.9 0.1 0.00019 21.5 0.0 2.1 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain Dus PF01207.17 ORF18188 - 7.6e-05 21.9 0.3 0.082 12.0 0.0 2.5 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 ORF18188 - 0.00035 20.1 1.0 0.0081 15.6 0.1 2.7 3 0 0 3 3 3 1 Histidine biosynthesis protein IGPS PF00218.21 ORF18188 - 0.0029 16.8 0.0 0.1 11.8 0.0 2.3 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase FMN_dh PF01070.18 ORF18188 - 0.015 14.3 1.4 0.045 12.8 0.0 2.2 2 1 0 2 2 2 0 FMN-dependent dehydrogenase NMO PF03060.15 ORF18188 - 0.016 14.6 1.4 0.098 12.0 0.2 2.2 2 0 0 2 2 2 0 Nitronate monooxygenase TMP-TENI PF02581.17 ORF18188 - 0.018 14.4 0.5 0.96 8.7 0.1 2.5 2 0 0 2 2 2 0 Thiamine monophosphate synthase OMPdecase PF00215.24 ORF18188 - 0.045 13.3 0.3 3.1 7.3 0.0 2.4 1 1 1 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family Phage_Cox PF10743.9 ORF18188 - 0.12 12.5 0.0 0.37 10.9 0.0 1.9 1 0 0 1 1 1 0 Regulatory phage protein cox YchF-GTPase_C PF06071.13 ORF17315 - 7.8e-40 135.0 0.3 1.7e-39 133.8 0.3 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 ORF17315 - 1.4e-06 28.3 0.5 5.8e-06 26.4 0.5 2.2 1 1 0 1 1 1 1 50S ribosome-binding GTPase Abhydrolase_1 PF00561.20 ORF14177 - 5.9e-15 55.6 0.0 8.3e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF14177 - 0.17 12.0 0.0 0.36 11.0 0.0 1.5 1 0 0 1 1 1 0 TAP-like protein Herpes_ORF11 PF04797.13 ORF111339 - 0.1 11.4 0.0 0.17 10.7 0.0 1.3 1 0 0 1 1 1 0 Herpesvirus dUTPase protein CLU PF13236.6 ORF110504 - 4.3e-38 131.4 0.8 5.7e-38 130.9 0.0 1.6 2 0 0 2 2 2 1 Clustered mitochondria eIF3_p135 PF12807.7 ORF110504 - 5.3e-10 39.6 5.0 7.1e-10 39.2 0.0 2.4 2 0 0 2 2 2 1 Translation initiation factor eIF3 subunit 135 Vfa1 PF08432.10 ORF110504 - 0.43 10.9 14.5 0.75 10.1 14.5 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 AAA_11 PF13086.6 ORF110504 - 2.2 8.0 10.5 2.9 7.6 9.9 1.6 1 1 0 1 1 1 0 AAA domain Calcyon PF06387.11 ORF106635 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) SdiA-regulated PF06977.11 ORF104363 - 3.6e-88 295.0 0.1 4.3e-88 294.7 0.1 1.0 1 0 0 1 1 1 1 SdiA-regulated Phytase-like PF13449.6 ORF104363 - 3.8e-07 30.3 0.0 7.3e-06 26.1 0.0 2.2 1 1 1 2 2 2 1 Esterase-like activity of phytase NusG_II PF07009.11 ORF104363 - 0.0064 16.7 1.6 0.42 10.8 0.2 3.5 2 2 1 3 3 3 1 NusG domain II DUF5050 PF16472.5 ORF104363 - 0.04 13.2 0.1 0.073 12.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5050) Arylsulfotrans PF05935.11 ORF104363 - 0.086 11.7 0.0 0.14 11.0 0.0 1.3 1 0 0 1 1 1 0 Arylsulfotransferase (ASST) Shisa PF13908.6 ORF104363 - 0.15 12.3 0.2 0.22 11.7 0.2 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF2892 PF11127.8 ORF103156 - 6.6 6.9 8.2 4.6 7.3 0.5 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2892) DUF4055 PF13264.6 ORF100325 - 0.23 11.6 5.7 0.56 10.3 5.7 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4055) Sp38 PF07354.12 NODE_20489_length_966_cov_275.486574_g15719_i0reverse_frame_1 - 0.044 13.2 33.2 0.26 10.7 3.8 4.8 1 1 4 5 5 5 0 Zona-pellucida-binding protein (Sp38) DUF3136 PF11334.8 NODE_20489_length_966_cov_275.486574_g15719_i0forward_frame_1 - 0.14 12.0 3.8 44 4.0 0.1 4.1 2 2 2 4 4 4 0 Protein of unknown function (DUF3136) NYD-SP28 PF14772.6 NODE_20447_length_968_cov_18.651661_g15686_i0forward_frame_2 - 0.025 14.6 0.8 0.025 14.6 0.8 3.5 1 1 2 3 3 3 0 Sperm tail SlyX PF04102.12 NODE_20447_length_968_cov_18.651661_g15686_i0forward_frame_2 - 0.093 13.4 0.6 0.093 13.4 0.6 4.6 3 1 2 5 5 5 0 SlyX DUF3584 PF12128.8 NODE_20447_length_968_cov_18.651661_g15686_i0forward_frame_2 - 0.81 7.1 28.4 0.012 13.2 15.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) Cob_adeno_trans PF01923.18 NODE_20447_length_968_cov_18.651661_g15686_i0forward_frame_2 - 1.8 8.7 6.4 0.46 10.6 1.3 2.1 1 1 1 2 2 2 0 Cobalamin adenosyltransferase DUF5082 PF16888.5 NODE_20447_length_968_cov_18.651661_g15686_i0forward_frame_2 - 6.7 7.0 32.6 0.8 10.0 24.0 3.3 2 2 0 2 2 2 0 Domain of unknown function (DUF5082) HMMR_N PF15905.5 NODE_20447_length_968_cov_18.651661_g15686_i0forward_frame_2 - 7.7 5.9 42.2 0.22 11.0 32.0 2.3 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal InvH PF04741.12 NODE_20444_length_968_cov_100.451233_g15683_i0reverse_frame_2 - 0.048 13.6 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 InvH outer membrane lipoprotein PHM7_ext PF12621.8 NODE_20437_length_968_cov_149.132905_g15676_i0reverse_frame_3 - 0.045 13.9 0.6 0.22 11.7 0.1 2.1 2 0 0 2 2 2 0 Extracellular tail, of 10TM putative phosphate transporter RNase_HII PF01351.18 NODE_20437_length_968_cov_149.132905_g15676_i0reverse_frame_2 - 0.098 12.5 3.2 0.21 11.4 0.5 2.2 2 0 0 2 2 2 0 Ribonuclease HII TypeIII_RM_meth PF12564.8 NODE_20430_length_968_cov_234.150054_g15670_i0reverse_frame_2 - 3 8.0 9.2 0.19 11.9 0.8 2.8 3 0 0 3 3 3 0 Type III restriction/modification enzyme methylation subunit HlyD_D23 PF16576.5 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 1.1e-13 50.9 6.2 9.6e-12 44.6 6.2 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 7.4e-13 49.1 2.1 9.8e-11 42.3 0.1 2.4 2 0 0 2 2 2 2 HlyD family secretion protein HlyD PF00529.20 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 2.1e-08 33.9 0.1 3.3e-08 33.3 0.1 1.3 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl_2 PF13533.6 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 8.9e-05 22.2 0.1 8.9e-05 22.2 0.1 2.6 2 1 0 2 2 2 1 Biotin-lipoyl like Orf78 PF06024.12 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.0037 17.5 1.6 0.0069 16.7 0.0 2.0 2 1 0 2 2 2 1 Orf78 (ac78) FixH PF05751.11 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.042 13.8 0.1 0.073 13.1 0.1 1.5 1 0 0 1 1 1 0 FixH DUF2776 PF10951.8 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.096 11.9 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) DUF3328 PF11807.8 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.18 11.5 0.1 5.9 6.6 0.0 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF3328) DUF4398 PF14346.6 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.76 10.4 16.1 0.39 11.4 1.4 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4398) Sugar_tr PF00083.24 NODE_20407_length_969_cov_4.402570_g15653_i0forward_frame_2 - 2.9e-98 329.7 17.1 3.3e-98 329.5 17.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_20407_length_969_cov_4.402570_g15653_i0forward_frame_2 - 6.9e-19 68.0 23.7 8.6e-19 67.7 23.7 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily SLT PF01464.20 ORF99951 - 8.3e-23 80.3 0.1 1.5e-22 79.5 0.1 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain SBP_bac_3 PF00497.20 ORF99951 - 1.4e-08 34.4 0.0 2.7e-08 33.5 0.0 1.5 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lysozyme_like PF13702.6 ORF99951 - 7.8e-05 22.4 0.1 0.00021 21.0 0.1 1.9 1 1 0 1 1 1 1 Lysozyme-like Somatomedin_B PF01033.17 ORF94962 - 8.2e-05 22.9 12.8 0.00016 22.0 12.8 1.5 1 0 0 1 1 1 1 Somatomedin B domain Peptidase_C1 PF00112.23 ORF9182 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF9182 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF9182 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF9182 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF9182 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF9182 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF9182 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Peptidase_C1 PF00112.23 ORF91656 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF91656 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF91656 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF91656 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF91656 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF91656 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF91656 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Peptidase_C1 PF00112.23 ORF91281 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF91281 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF91281 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF91281 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF91281 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF91281 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF91281 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain 2OG-FeII_Oxy PF03171.20 ORF91072 - 1.6e-05 25.3 0.0 2.7e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily HigB-like_toxin PF05015.13 ORF90619 - 0.091 13.2 0.0 12 6.4 0.0 2.7 2 0 0 2 2 2 0 RelE-like toxin of type II toxin-antitoxin system HigB Lig_chan PF00060.26 ORF84267 - 1.4e-08 34.7 0.1 2e-08 34.2 0.1 1.2 1 0 0 1 1 1 1 Ligand-gated ion channel Glyco_hydro_92 PF07971.12 ORF84054 - 8.9e-43 146.9 0.0 1.1e-42 146.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 92 Peptidase_C1 PF00112.23 ORF78757 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF78757 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF78757 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF78757 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF78757 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF78757 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF78757 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Thiolase_N PF00108.23 ORF77645 - 2e-57 194.5 3.1 2e-57 194.5 3.1 1.4 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF77645 - 4.4e-50 168.4 1.5 7.4e-50 167.7 0.1 2.0 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF77645 - 0.0019 17.8 0.1 0.0082 15.7 0.1 2.1 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III_C PF08541.10 ORF77645 - 0.033 14.3 0.1 0.21 11.8 0.0 2.4 2 1 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FtsJ PF01728.19 ORF73302 - 9.6e-09 35.6 0.1 4.6e-07 30.1 0.0 2.2 2 0 0 2 2 2 1 FtsJ-like methyltransferase HTH_12 PF08461.10 ORF73302 - 0.13 12.3 3.6 0.17 11.9 0.4 2.7 2 2 0 2 2 2 0 Ribonuclease R winged-helix domain YtxH PF12732.7 ORF73302 - 3.1 8.4 8.2 23 5.6 0.6 3.2 2 1 0 2 2 2 0 YtxH-like protein DUF45 PF01863.17 ORF73302 - 10 6.1 12.3 1.2 9.2 3.9 2.6 1 1 2 3 3 3 0 Protein of unknown function DUF45 DUF463 PF04317.12 ORF71270 - 2.7e-120 402.3 0.0 3.1e-120 402.1 0.0 1.0 1 0 0 1 1 1 1 YcjX-like family, DUF463 DsbD PF02683.15 ORF6973 - 0.023 14.6 1.2 0.076 12.9 0.3 2.2 2 0 0 2 2 2 0 Cytochrome C biogenesis protein transmembrane region HET PF06985.11 ORF6973 - 0.13 12.6 0.3 0.32 11.3 0.3 1.5 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) Peptidase_C1 PF00112.23 ORF69325 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF69325 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF69325 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF69325 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF69325 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF69325 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF69325 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Pro_isomerase PF00160.21 ORF66637 - 8.6e-49 165.8 0.2 1.5e-48 165.1 0.2 1.4 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TPR_1 PF00515.28 ORF66637 - 1.9e-06 27.4 0.1 0.0052 16.6 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF66637 - 5e-05 23.1 0.0 0.001 19.0 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF66637 - 0.012 15.7 0.1 0.072 13.3 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Desmo_N PF06771.11 ORF66637 - 0.047 14.1 0.1 0.099 13.0 0.1 1.6 1 1 0 1 1 1 0 Viral Desmoplakin N-terminus TPR_11 PF13414.6 ORF66637 - 0.11 12.1 1.0 29 4.5 0.0 3.2 3 0 0 3 3 3 0 TPR repeat Fis1_TPR_C PF14853.6 ORF66637 - 0.12 12.5 0.0 0.55 10.3 0.0 2.0 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat SH3_3 PF08239.11 ORF65398 - 6.3e-06 26.4 0.5 1 9.7 0.0 4.4 4 1 0 4 4 4 3 Bacterial SH3 domain Radical_SAM_C PF16199.5 ORF63166 - 2e-31 107.8 0.1 3.6e-31 107.0 0.1 1.5 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Acetyltransf_1 PF00583.25 ORF63166 - 1.5e-13 51.0 0.1 2.8e-13 50.1 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Radical_SAM PF04055.21 ORF63166 - 5.7e-09 36.6 0.1 1.1e-07 32.4 0.0 2.5 3 0 0 3 3 3 1 Radical SAM superfamily Acetyltransf_10 PF13673.7 ORF63166 - 2.9e-06 27.2 0.1 8e-06 25.8 0.2 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF63166 - 0.0004 20.7 0.0 0.0007 20.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF63166 - 0.18 11.8 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein LRR_6 PF13516.6 ORF57587 - 1.1e-24 84.3 6.9 5.1e-06 26.1 0.0 6.7 7 0 0 7 7 7 5 Leucine Rich repeat CS PF04969.16 ORF57587 - 4.9e-08 33.9 0.0 8.1e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 CS domain LRR_1 PF00560.33 ORF57587 - 1.6e-07 30.9 0.1 2.8 8.8 0.0 5.5 6 0 0 6 6 6 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF57587 - 3.6e-07 30.4 7.2 0.016 15.6 0.4 4.1 4 2 1 5 5 5 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF57587 - 3.6e-05 23.4 7.4 0.14 11.9 0.5 4.5 1 1 3 4 4 4 4 Leucine rich repeat MORN PF02493.20 ORF54396 - 7e-45 148.3 78.9 6.8e-08 32.0 0.5 10.2 12 0 0 12 12 12 8 MORN repeat DUF3048_C PF17479.2 ORF54396 - 0.015 15.7 20.8 2.7 8.4 1.5 5.3 1 1 5 6 6 6 0 Protein of unknown function (DUF3048) C-terminal domain DUF448 PF04296.13 ORF54396 - 1.1 9.1 8.8 37 4.3 0.2 4.9 3 1 2 5 5 5 0 Protein of unknown function (DUF448) Rib PF08428.10 ORF54396 - 1.2 9.2 9.2 79 3.3 4.1 4.4 2 1 1 3 3 3 0 Rib/alpha-like repeat Peptidase_C1 PF00112.23 ORF5380 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF5380 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF5380 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF5380 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF5380 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF5380 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF5380 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Peptidase_C1 PF00112.23 ORF52576 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF52576 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF52576 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF52576 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF52576 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF52576 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF52576 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Thiolase_N PF00108.23 ORF52099 - 2e-57 194.5 3.1 2e-57 194.5 3.1 1.4 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF52099 - 4.4e-50 168.4 1.5 7.4e-50 167.7 0.1 2.0 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF52099 - 0.0019 17.8 0.1 0.0082 15.7 0.1 2.1 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III_C PF08541.10 ORF52099 - 0.033 14.3 0.1 0.21 11.8 0.0 2.4 2 1 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Ribosomal_L10 PF00466.20 ORF45230 - 2.8e-23 81.9 0.1 4.8e-23 81.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 ORF45230 - 3.3e-21 75.1 0.0 5.7e-21 74.3 0.0 1.4 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 ORF45230 - 4.1e-09 36.9 4.0 7.1e-09 36.1 3.3 1.8 2 0 0 2 2 2 1 60s Acidic ribosomal protein DUF4381 PF14316.6 ORF43880 - 0.23 11.7 4.7 0.19 11.9 0.9 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4381) Fer2 PF00111.27 ORF40598 - 1.5e-14 53.7 2.5 3.3e-14 52.6 2.5 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 ORF40598 - 7.1e-08 32.7 0.0 1.3e-07 31.8 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF40598 - 7.5e-08 33.0 0.0 4.4e-07 30.5 0.0 2.1 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Fer2_3 PF13085.6 ORF40598 - 0.29 11.2 1.4 0.59 10.2 1.4 1.5 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Lipase_GDSL_2 PF13472.6 ORF39255 - 1.3e-14 55.0 0.1 2e-14 54.4 0.1 1.3 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family CBM_20 PF00686.19 ORF39255 - 2.7e-11 43.2 0.0 5.5e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Starch binding domain B12-binding PF02310.19 ORF39255 - 0.00032 20.7 0.0 0.00075 19.5 0.0 1.5 1 1 0 1 1 1 1 B12 binding domain Lipase_GDSL PF00657.22 ORF39255 - 0.0072 16.3 0.0 0.016 15.1 0.0 1.6 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase RIIa PF02197.17 ORF39255 - 0.012 15.2 0.0 0.034 13.8 0.0 1.8 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit Somatomedin_B PF01033.17 ORF37737 - 8.2e-05 22.9 12.8 0.00016 22.0 12.8 1.5 1 0 0 1 1 1 1 Somatomedin B domain DSPc PF00782.20 ORF34976 - 7.9e-07 29.0 0.0 1.4e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF34976 - 0.00073 19.2 0.0 0.0011 18.6 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF34976 - 0.11 12.7 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Inositol hexakisphosphate Y_phosphatase3 PF13350.6 ORF34976 - 0.21 11.6 0.8 0.32 10.9 0.7 1.3 1 1 0 1 1 1 0 Tyrosine phosphatase family PAN_2 PF08276.11 ORF30822 - 0.0088 16.1 1.3 0.02 15.0 1.3 1.6 1 0 0 1 1 1 1 PAN-like domain JHY PF15261.6 ORF29173 - 3.6e-10 40.7 5.5 3.6e-10 40.7 5.5 3.1 2 1 1 3 3 3 1 Jhy protein Hormone_3 PF00159.18 ORF26440 - 0.15 12.2 0.1 0.6 10.2 0.0 2.0 2 0 0 2 2 2 0 Pancreatic hormone peptide ADH_zinc_N PF00107.26 ORF18375 - 2.4e-13 50.2 0.0 5.5e-13 49.0 0.0 1.5 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF18375 - 2.8e-10 40.1 0.1 5.2e-10 39.2 0.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 ORF18375 - 2.8e-07 30.2 0.0 6.2e-07 29.1 0.0 1.5 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF18375 - 0.0011 20.1 0.0 0.0021 19.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AIRS_C PF02769.22 ORF17599 - 4.7e-26 91.8 2.7 8.8e-26 90.9 2.7 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF17599 - 4.6e-16 59.2 0.6 1.2e-15 57.9 0.6 1.7 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Peptidase_C1 PF00112.23 ORF16781 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF16781 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF16781 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF16781 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF16781 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF16781 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF16781 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain JHY PF15261.6 ORF13039 - 3.6e-10 40.7 5.5 3.6e-10 40.7 5.5 3.1 2 1 1 3 3 3 1 Jhy protein DUF1129 PF06570.11 ORF12156 - 0.1 12.0 0.2 0.17 11.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) IHABP4_N PF16174.5 ORF12156 - 1.2 9.7 9.5 1.8 9.1 8.2 1.8 2 0 0 2 2 2 0 Intracellular hyaluronan-binding protein 4 N-terminal FAM70 PF14967.6 ORF12156 - 3.3 7.1 7.3 5.6 6.3 7.3 1.3 1 0 0 1 1 1 0 FAM70 protein RCC1_2 PF13540.6 ORF11935 - 1.4e-50 168.2 41.7 2.5e-11 43.0 0.7 7.1 7 0 0 7 7 7 6 Regulator of chromosome condensation (RCC1) repeat PQQ_3 PF13570.6 ORF11935 - 4.3e-05 23.9 3.7 4.6 7.8 0.1 5.8 6 1 0 6 6 6 2 PQQ-like domain Kelch_6 PF13964.6 ORF11935 - 0.0001 22.5 11.1 16 5.9 0.0 6.1 6 0 0 6 6 6 3 Kelch motif RCC1 PF00415.18 ORF11935 - 0.0014 19.2 46.0 1.4 9.6 3.2 10.1 7 5 1 8 8 8 3 Regulator of chromosome condensation (RCC1) repeat Kelch_4 PF13418.6 ORF11935 - 0.0027 17.7 16.3 4.6 7.3 0.0 5.8 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF11935 - 1.9 8.5 11.3 2.8 8.0 0.0 4.6 5 0 0 5 5 5 0 Kelch motif SieB PF14163.6 ORF112191 - 0.74 9.3 2.1 1.7 8.1 2.1 1.6 1 0 0 1 1 1 0 Super-infection exclusion protein B Peptidase_C1 PF00112.23 ORF110709 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF110709 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF110709 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF110709 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF110709 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF110709 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF110709 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Peptidase_C1 PF00112.23 ORF109744 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF109744 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF109744 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF109744 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF109744 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF109744 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF109744 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Peptidase_C1 PF00112.23 ORF105933 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF105933 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF105933 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF105933 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF105933 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF105933 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF105933 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain PhoLip_ATPase_C PF16212.5 ORF105066 - 2.3e-42 145.5 34.6 2.7e-42 145.3 34.6 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal YrhK PF14145.6 ORF105066 - 0.0023 17.8 1.5 0.009 15.9 1.5 2.0 1 0 0 1 1 1 1 YrhK-like protein SieB PF14163.6 ORF102257 - 0.74 9.3 2.1 1.7 8.1 2.1 1.6 1 0 0 1 1 1 0 Super-infection exclusion protein B Pkinase PF00069.25 ORF100148 - 3.4e-82 275.8 0.0 4.2e-82 275.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100148 - 4.9e-41 140.7 0.0 6.2e-41 140.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF100148 - 2.9e-05 23.5 0.0 7e-05 22.3 0.0 1.6 2 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF100148 - 0.0017 17.7 0.0 0.0027 17.1 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family ABC1 PF03109.16 ORF100148 - 0.016 15.4 0.1 0.033 14.3 0.1 1.5 1 0 0 1 1 1 0 ABC1 family APH PF01636.23 ORF100148 - 0.017 15.1 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 ORF100148 - 0.029 13.9 0.0 0.061 12.8 0.0 1.5 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF100148 - 0.065 12.0 0.0 0.083 11.6 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase DUF918 PF06033.11 NODE_20593_length_963_cov_4.289871_g15804_i0reverse_frame_1 - 0.27 11.2 0.3 0.43 10.6 0.3 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF918) Auxin_canalis PF05703.11 NODE_20493_length_966_cov_210.387755_g15722_i0forward_frame_3 - 0.41 10.5 4.9 0.046 13.7 0.8 1.5 2 0 0 2 2 2 0 Auxin canalisation TOH_N PF12549.8 NODE_20489_length_966_cov_275.486574_g15719_i0reverse_frame_3 - 0.036 13.9 0.5 11 6.0 0.0 3.7 4 0 0 4 4 4 0 Tyrosine hydroxylase N terminal HalX PF08663.10 NODE_20489_length_966_cov_275.486574_g15719_i0reverse_frame_3 - 0.36 11.2 26.0 4.6 7.6 0.3 5.6 4 3 1 5 5 5 0 HalX domain TOH_N PF12549.8 NODE_20489_length_966_cov_275.486574_g15719_i0reverse_frame_2 - 0.028 14.3 1.2 10 6.1 0.0 4.2 4 0 0 4 4 4 0 Tyrosine hydroxylase N terminal HalX PF08663.10 NODE_20489_length_966_cov_275.486574_g15719_i0reverse_frame_2 - 0.24 11.7 33.7 12 6.3 0.4 7.0 5 3 1 6 6 6 0 HalX domain RTTN_N PF14726.6 NODE_20489_length_966_cov_275.486574_g15719_i0reverse_frame_2 - 1.5 9.6 3.5 42 5.0 0.2 2.8 1 1 1 3 3 3 0 Rotatin, an armadillo repeat protein, centriole functioning FNIP PF05725.12 NODE_20489_length_966_cov_275.486574_g15719_i0forward_frame_3 - 1e-48 163.2 25.9 5.2e-12 45.7 0.2 4.6 4 1 0 5 5 5 4 FNIP Repeat LRR_5 PF13306.6 NODE_20489_length_966_cov_275.486574_g15719_i0forward_frame_3 - 0.0032 17.4 2.1 0.16 12.0 0.9 2.3 1 1 1 2 2 2 2 BspA type Leucine rich repeat region (6 copies) W_rich_C PF07483.11 NODE_20489_length_966_cov_275.486574_g15719_i0forward_frame_3 - 5 7.3 5.3 80 3.5 0.1 4.1 2 2 2 5 5 5 0 Tryptophan-rich Synechocystis species C-terminal domain FNIP PF05725.12 NODE_20489_length_966_cov_275.486574_g15719_i0forward_frame_2 - 3.8e-33 113.4 12.8 7.9e-12 45.2 1.2 4.2 2 1 1 5 5 5 4 FNIP Repeat DUF4880 PF16220.5 NODE_20489_length_966_cov_275.486574_g15719_i0forward_frame_2 - 0.12 12.3 12.5 11 6.0 0.1 5.5 7 0 0 7 7 7 0 Domain of unknown function (DUF4880) LRR_5 PF13306.6 NODE_20489_length_966_cov_275.486574_g15719_i0forward_frame_2 - 0.29 11.1 0.8 0.49 10.4 0.8 1.3 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) Glyco_hydro_31 PF01055.26 ORF99242 - 8.2e-46 157.1 0.2 1.1e-45 156.7 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF99242 - 0.0074 16.5 0.1 0.018 15.3 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Methyltransf_4 PF02390.17 ORF98824 - 5.8e-43 146.3 0.6 9.4e-43 145.7 0.0 1.6 2 0 0 2 2 2 1 Putative methyltransferase MTS PF05175.14 ORF98824 - 0.00064 19.3 0.0 0.0012 18.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 ORF98824 - 0.00074 20.2 0.0 0.0012 19.4 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 ORF98824 - 0.0022 18.0 0.6 0.0045 17.0 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF98824 - 0.0032 17.3 0.0 0.0078 16.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF98824 - 0.0038 17.0 0.1 0.0056 16.5 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 ORF98824 - 0.016 14.3 0.0 0.032 13.3 0.0 1.5 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DOT1 PF08123.13 ORF98824 - 0.059 12.9 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_18 PF12847.7 ORF98824 - 0.063 13.2 0.0 0.59 10.1 0.0 2.2 1 1 0 1 1 1 0 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 ORF98824 - 0.092 11.7 0.2 0.2 10.6 0.0 1.6 2 0 0 2 2 2 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_11 PF08241.12 ORF98824 - 0.14 12.8 0.0 0.4 11.3 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Sugar_transport PF06800.12 ORF91335 - 2.3e-05 23.9 4.3 2.3e-05 23.9 4.3 1.9 2 0 0 2 2 2 1 Sugar transport protein FAM176 PF14851.6 ORF91335 - 7.4e-05 22.4 1.6 0.00052 19.7 1.1 2.1 2 0 0 2 2 2 1 FAM176 family TMEM144 PF07857.12 ORF91335 - 7.5e-05 21.9 0.8 0.00013 21.1 0.0 1.8 2 1 0 2 2 2 1 Transmembrane family, TMEM144 of transporters PTPRCAP PF15713.5 ORF91335 - 0.0005 20.4 7.9 0.00078 19.8 7.9 1.3 1 0 0 1 1 1 1 Protein tyrosine phosphatase receptor type C-associated DUF4079 PF13301.6 ORF91335 - 0.0013 18.9 2.6 0.0022 18.2 0.1 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF4079) BUD22 PF09073.10 ORF91335 - 0.0033 16.8 5.5 0.0041 16.5 5.5 1.0 1 0 0 1 1 1 1 BUD22 SDA1 PF05285.12 ORF91335 - 0.005 16.3 9.2 0.0061 16.0 9.2 1.1 1 0 0 1 1 1 1 SDA1 Mpp10 PF04006.12 ORF91335 - 0.0078 14.7 9.4 0.0095 14.4 9.4 1.0 1 0 0 1 1 1 1 Mpp10 protein O-antigen_lig PF13425.6 ORF91335 - 0.03 13.1 0.0 0.071 11.9 0.0 1.5 2 0 0 2 2 2 0 O-antigen ligase like membrane protein Tim54 PF11711.8 ORF91335 - 0.03 13.1 2.1 0.041 12.7 2.1 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Sigma70_ner PF04546.13 ORF91335 - 0.086 12.7 8.5 0.12 12.3 8.5 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region TRAP_alpha PF03896.16 ORF91335 - 0.12 11.5 4.3 0.17 11.1 4.3 1.2 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit CPSF100_C PF13299.6 ORF91335 - 0.15 12.2 0.8 0.22 11.7 0.8 1.2 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal DUF4746 PF15928.5 ORF91335 - 0.16 11.4 10.4 0.22 10.9 10.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Connexin PF00029.19 ORF91335 - 0.16 11.7 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 Connexin Trypan_PARP PF05887.11 ORF91335 - 0.19 11.7 8.8 0.38 10.7 8.8 1.5 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF4064 PF13273.6 ORF91335 - 0.22 11.8 15.3 1.9 8.8 0.4 3.4 3 1 0 3 3 2 0 Protein of unknown function (DUF4064) DUF2457 PF10446.9 ORF91335 - 0.23 10.6 20.6 0.28 10.3 20.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF913 PF06025.12 ORF91335 - 0.27 10.2 0.1 0.34 9.8 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF2722 PF10846.8 ORF91335 - 0.43 9.5 3.6 0.55 9.1 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) RPA43_OB PF17875.1 ORF91335 - 0.47 11.1 5.0 1.1 9.9 5.0 1.6 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I EamA PF00892.20 ORF91335 - 0.53 10.4 20.7 0.034 14.3 8.0 3.1 3 1 0 3 3 3 0 EamA-like transporter family CobT PF06213.12 ORF91335 - 0.67 9.3 15.4 0.96 8.8 15.4 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Nop14 PF04147.12 ORF91335 - 0.85 7.7 17.5 1.1 7.3 17.5 1.0 1 0 0 1 1 1 0 Nop14-like family RNA_pol_Rpc4 PF05132.14 ORF91335 - 1.8 9.0 4.3 3 8.3 4.3 1.3 1 0 0 1 1 1 0 RNA polymerase III RPC4 Sporozoite_P67 PF05642.11 ORF91335 - 2 6.4 4.0 2.8 5.9 4.0 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen RR_TM4-6 PF06459.12 ORF91335 - 2.4 7.9 7.7 3.2 7.5 7.7 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TFB6 PF17110.5 ORF91335 - 2.9 7.6 7.8 4.3 7.1 7.8 1.2 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF1115 PF06544.12 ORF91335 - 2.9 8.0 5.4 4.8 7.3 5.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1115) NOA36 PF06524.12 ORF91335 - 3.2 7.0 19.2 5.3 6.3 19.2 1.2 1 0 0 1 1 1 0 NOA36 protein RPN2_C PF18004.1 ORF91335 - 4.8 7.1 10.5 6.9 6.6 10.5 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain Afi1 PF07792.12 ORF91335 - 9.9 6.7 8.8 16 6.0 8.8 1.2 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking UIM PF02809.20 ORF90551 - 0.047 13.6 0.3 0.14 12.2 0.3 1.9 1 0 0 1 1 1 0 Ubiquitin interaction motif DUF4407 PF14362.6 ORF90551 - 0.076 12.4 1.6 0.096 12.0 1.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-RING_2 PF13639.6 ORF88722 - 4.8e-11 42.8 9.8 4.8e-11 42.8 9.8 1.9 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF88722 - 3.2e-06 27.3 8.3 7.7e-06 26.1 8.3 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF88722 - 8.5e-06 25.4 4.6 8.5e-06 25.4 4.6 2.5 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF88722 - 1.3e-05 25.0 8.3 2.9e-05 23.8 8.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF88722 - 4.3e-05 23.4 2.3 4.3e-05 23.4 2.3 2.5 2 1 1 3 3 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF88722 - 4.8e-05 23.1 9.9 0.00017 21.4 9.9 2.0 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF88722 - 0.00028 20.9 3.5 0.00069 19.6 3.5 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF88722 - 0.00075 19.4 9.0 0.00075 19.4 9.0 2.1 2 0 0 2 2 2 1 zinc-RING finger domain Prok-RING_1 PF14446.6 ORF88722 - 0.0029 17.5 6.7 0.02 14.8 3.5 2.4 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 ORF88722 - 0.0084 16.0 5.8 0.0084 16.0 5.8 2.4 2 1 0 2 2 2 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF88722 - 0.0092 16.1 8.0 0.026 14.7 8.0 1.8 1 1 0 1 1 1 1 FANCL C-terminal domain Peptidase_A24 PF01478.18 ORF88722 - 0.0095 16.3 0.2 0.056 13.9 0.0 2.2 2 1 0 2 2 2 1 Type IV leader peptidase family zf-C3HC4_3 PF13920.6 ORF88722 - 0.015 15.2 6.9 0.015 15.2 6.9 2.0 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Baculo_IE-1 PF05290.11 ORF88722 - 0.027 14.4 1.1 0.045 13.7 1.1 1.3 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) zf-RING_6 PF14835.6 ORF88722 - 0.18 11.7 2.1 0.54 10.2 2.1 1.8 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_4 PF14570.6 ORF88722 - 0.23 11.3 6.5 0.47 10.3 6.5 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF88722 - 0.28 11.4 6.5 1.2 9.3 6.4 2.2 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING RINGv PF12906.7 ORF88722 - 0.3 11.2 9.3 0.93 9.7 9.3 1.9 1 0 0 1 1 1 0 RING-variant domain zf-Nse PF11789.8 ORF88722 - 0.53 10.1 3.4 1 9.3 3.4 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_ribbon_17 PF17120.5 ORF88722 - 0.79 9.4 14.4 0.054 13.1 8.6 2.0 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF88722 - 2.3 8.2 10.3 5.5 7.0 10.3 1.7 1 0 0 1 1 1 0 PHD-finger zf-RING-like PF08746.11 ORF88722 - 8 6.9 9.4 20 5.6 9.4 1.7 1 0 0 1 1 1 0 RING-like domain MORN PF02493.20 ORF86784 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat DUF2048 PF09752.9 ORF86539 - 2.6e-38 132.0 0.0 3.4e-32 111.9 0.0 2.0 1 1 1 2 2 2 2 Abhydrolase domain containing 18 Peptidase_S15 PF02129.18 ORF86539 - 0.04 13.5 0.0 0.07 12.7 0.0 1.4 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) MTS PF05175.14 ORF83227 - 4.5e-13 49.1 0.0 3.2e-11 43.1 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 ORF83227 - 6.2e-10 39.0 0.0 1.3e-09 38.0 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 ORF83227 - 3.5e-07 29.9 0.0 7.2e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 ORF83227 - 1e-06 29.3 0.0 8.2e-06 26.4 0.0 2.4 2 1 1 3 3 3 1 Methyltransferase domain Met_10 PF02475.16 ORF83227 - 0.00076 19.3 0.0 0.0015 18.3 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.6 ORF83227 - 0.0011 18.8 0.0 0.012 15.5 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 ORF83227 - 0.0024 17.7 0.0 0.0042 16.8 0.0 1.4 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_31 PF13847.6 ORF83227 - 0.0092 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 ORF83227 - 0.016 14.5 0.0 0.025 13.9 0.0 1.3 1 0 0 1 1 1 0 N-6 DNA Methylase Methyltransf_11 PF08241.12 ORF83227 - 0.065 13.9 0.0 0.28 11.9 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 ORF83227 - 0.14 11.8 0.0 16 5.0 0.0 2.1 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F Glyco_hydro_31 PF01055.26 ORF8129 - 8.4e-47 160.3 0.2 1.1e-46 160.0 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF8129 - 0.0073 16.6 0.1 0.018 15.3 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) ATP-synt PF00231.19 ORF79953 - 6.1e-71 239.4 1.3 7e-71 239.2 1.3 1.0 1 0 0 1 1 1 1 ATP synthase TTL PF03133.15 ORF79697 - 1.5e-21 76.8 0.2 1.5e-21 76.8 0.2 1.8 2 0 0 2 2 2 1 Tubulin-tyrosine ligase family S_locus_glycop PF00954.20 ORF79697 - 0.024 15.2 3.0 1.3 9.5 0.0 2.4 2 0 0 2 2 2 0 S-locus glycoprotein domain Patatin PF01734.22 ORF7943 - 5e-15 56.2 0.0 3e-14 53.7 0.0 1.9 1 1 0 1 1 1 1 Patatin-like phospholipase A-2_8-polyST PF07388.11 ORF7943 - 0.085 11.4 0.0 6.2 5.3 0.0 2.3 2 0 0 2 2 2 0 Alpha-2,8-polysialyltransferase (POLYST) FUSC_2 PF13515.6 ORF74543 - 1.2e-26 93.4 13.0 1.7e-26 92.8 13.0 1.2 1 0 0 1 1 1 1 Fusaric acid resistance protein-like FUSC PF04632.12 ORF74543 - 3.5e-12 45.7 2.4 5.6e-12 45.0 2.4 1.2 1 0 0 1 1 1 1 Fusaric acid resistance protein family ALMT PF11744.8 ORF74543 - 0.028 13.3 1.2 0.11 11.3 0.7 2.1 1 1 0 1 1 1 0 Aluminium activated malate transporter SlyX PF04102.12 ORF74543 - 0.039 14.6 1.5 0.086 13.5 0.3 2.1 1 1 1 2 2 2 0 SlyX GWT1 PF06423.12 ORF74543 - 0.18 11.9 0.9 0.33 11.1 0.9 1.4 1 0 0 1 1 1 0 GWT1 UPF0542 PF15086.6 ORF73785 - 0.014 15.4 0.2 0.014 15.4 0.2 3.0 3 0 0 3 3 3 0 Uncharacterised protein family UPF0542 DUF4834 PF16118.5 ORF73785 - 0.015 16.2 1.4 3.7 8.6 0.0 3.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) Vpu PF00558.19 ORF73785 - 0.016 15.0 0.5 4.8 7.0 0.1 3.2 3 0 0 3 3 3 0 Vpu protein Herpes_LMP1 PF05297.11 ORF73785 - 0.028 13.6 1.0 2.8 7.1 1.1 2.5 2 0 0 2 2 2 0 Herpesvirus latent membrane protein 1 (LMP1) ECSCR PF15820.5 ORF73785 - 0.046 13.6 0.7 0.16 11.8 0.0 2.3 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator Herpes_gE PF02480.16 ORF73785 - 0.046 12.5 0.0 3.9 6.1 0.0 2.2 2 0 0 2 2 2 0 Alphaherpesvirus glycoprotein E Endomucin PF07010.12 ORF73785 - 0.1 12.6 0.1 0.22 11.4 0.1 1.5 1 0 0 1 1 1 0 Endomucin DUF3852 PF12963.7 ORF73785 - 0.16 12.3 3.5 4.2 7.8 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3852) TRP PF06011.12 ORF73785 - 1.2 7.7 9.8 0.046 12.5 1.8 2.2 2 1 0 2 2 2 0 Transient receptor potential (TRP) ion channel DUF2207 PF09972.9 ORF73785 - 2.5 6.8 5.6 4.8 5.8 0.3 2.3 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF73785 - 3.9 7.8 13.3 13 6.1 6.0 3.1 2 2 0 2 2 2 0 Protein of unknown function (DUF4064) DUF3810 PF12725.7 ORF73785 - 7.8 5.7 11.2 1.7 7.9 2.0 2.6 1 1 1 3 3 3 0 Protein of unknown function (DUF3810) Ion_trans PF00520.31 ORF71491 - 3.8e-13 49.2 13.1 5.2e-13 48.8 13.1 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF71491 - 8.2e-11 40.7 0.2 6.9e-07 28.4 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF71491 - 1.8e-09 36.8 0.0 2.6e-05 23.8 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF71491 - 2e-09 37.8 1.6 4.4e-05 23.8 0.1 2.6 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF71491 - 8.5e-07 28.2 0.1 8.7e-05 21.8 0.1 2.6 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF71491 - 0.00019 21.2 0.2 0.018 14.8 0.1 2.4 2 0 0 2 2 2 1 EF-hand domain pair PKD_channel PF08016.12 ORF71491 - 9.6 4.8 11.2 20 3.7 11.1 1.6 1 1 0 1 1 1 0 Polycystin cation channel LCM PF04072.14 ORF67912 - 1.9e-27 96.5 0.0 2.9e-27 95.8 0.0 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Actin PF00022.19 ORF66304 - 2.9e-56 190.9 0.0 1.9e-54 184.9 0.0 2.0 1 1 0 1 1 1 1 Actin Methyltransf_25 PF13649.6 ORF66178 - 1.9e-07 31.7 0.0 5.5e-07 30.2 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF66178 - 2e-05 24.5 0.0 3.1e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF66178 - 6.7e-05 23.5 0.0 0.00018 22.1 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF66178 - 0.0086 16.8 0.0 0.028 15.1 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain HSP90 PF00183.18 ORF64428 - 1.4e-92 311.3 24.4 1.6e-92 311.1 24.4 1.0 1 0 0 1 1 1 1 Hsp90 protein CDC45 PF02724.14 ORF64428 - 0.038 12.3 11.6 0.047 12.0 11.6 1.1 1 0 0 1 1 1 0 CDC45-like protein NOA36 PF06524.12 ORF64428 - 0.06 12.7 14.4 0.087 12.1 14.4 1.2 1 0 0 1 1 1 0 NOA36 protein PDCD2_C PF04194.13 ORF64428 - 0.24 11.5 8.6 0.38 10.8 8.6 1.3 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain Sporozoite_P67 PF05642.11 ORF64428 - 0.3 9.1 8.2 0.39 8.7 8.2 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen RNA_pol_Rpc4 PF05132.14 ORF64428 - 0.43 11.0 3.9 0.74 10.2 3.9 1.3 1 0 0 1 1 1 0 RNA polymerase III RPC4 Spt5_N PF11942.8 ORF64428 - 0.45 11.5 19.7 1 10.4 19.7 1.5 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal DNA_pol_phi PF04931.13 ORF64428 - 0.69 7.9 17.3 0.98 7.4 17.3 1.2 1 0 0 1 1 1 0 DNA polymerase phi Sigma70_ner PF04546.13 ORF64428 - 1.2 8.9 17.6 0.48 10.3 14.4 1.8 2 0 0 2 2 2 0 Sigma-70, non-essential region FAM176 PF14851.6 ORF64428 - 1.7 8.3 8.9 3.4 7.3 8.9 1.5 1 0 0 1 1 1 0 FAM176 family GEN1_C PF18380.1 ORF64428 - 2.5 9.0 11.9 5.7 7.9 11.9 1.5 1 0 0 1 1 1 0 Holliday junction resolvase Gen1 C-terminal domain CobT PF06213.12 ORF64428 - 4.7 6.5 13.8 6.6 6.0 13.4 1.5 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT DUF2457 PF10446.9 ORF64428 - 7.6 5.6 22.2 11 5.0 22.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) RRN3 PF05327.11 ORF64428 - 7.9 4.9 12.7 12 4.3 12.7 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Pkinase PF00069.25 ORF60905 - 4.9e-57 193.3 0.0 5.8e-57 193.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60905 - 6.4e-30 104.3 0.0 8.5e-30 103.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF60905 - 5.7e-05 22.6 0.1 8.3e-05 22.0 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF60905 - 0.0084 15.8 0.5 0.24 11.0 0.0 2.2 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF60905 - 0.031 13.2 1.3 0.053 12.5 0.2 1.9 2 1 0 2 2 2 0 Haspin like kinase domain APH PF01636.23 ORF60905 - 0.035 14.0 0.1 0.91 9.4 0.1 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family ODC_AZ PF02100.17 ORF6013 - 0.01 15.8 0.2 0.023 14.7 0.2 1.6 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme Asp PF00026.23 ORF57051 - 3.4e-17 62.9 0.0 4e-17 62.6 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF57051 - 9.6e-05 22.2 0.0 0.00036 20.4 0.0 1.8 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal POTRA_TamA_1 PF17243.2 ORF52778 - 0.0035 17.4 1.8 0.092 12.8 0.5 2.7 2 0 0 2 2 2 1 POTRA domain TamA domain 1 Nexin_C PF08628.12 ORF52778 - 0.027 15.0 0.6 0.095 13.3 0.6 2.0 1 1 0 1 1 1 0 Sorting nexin C terminal Clr2 PF10383.9 ORF52778 - 0.56 11.0 7.5 0.18 12.6 3.9 2.0 1 1 1 2 2 2 0 Transcription-silencing protein Clr2 KH_1 PF00013.29 ORF51151 - 4.2e-31 106.6 0.6 4.2e-11 42.5 0.2 3.2 3 0 0 3 3 3 3 KH domain KH_2 PF07650.17 ORF51151 - 1.3e-08 34.5 8.9 0.0035 17.1 0.7 3.8 3 1 1 4 4 4 3 KH domain KH_4 PF13083.6 ORF51151 - 0.13 12.2 4.2 0.94 9.4 0.2 3.0 3 0 0 3 3 3 0 KH domain KH_5 PF13184.6 ORF51151 - 0.14 12.3 4.2 5.8 7.1 0.1 3.0 3 0 0 3 3 3 0 NusA-like KH domain Glug PF07581.12 ORF51151 - 0.21 12.0 2.2 15 6.3 0.1 2.6 2 0 0 2 2 2 0 The GLUG motif CRAL_TRIO PF00650.20 ORF50539 - 0.00012 21.9 0.0 0.00018 21.3 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain zf-RING_2 PF13639.6 ORF45717 - 4.8e-11 42.8 9.8 4.8e-11 42.8 9.8 1.9 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF45717 - 3.2e-06 27.3 8.3 7.7e-06 26.1 8.3 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF45717 - 8.5e-06 25.4 4.6 8.5e-06 25.4 4.6 2.5 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF45717 - 1.3e-05 25.0 8.3 2.9e-05 23.8 8.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF45717 - 4.3e-05 23.4 2.3 4.3e-05 23.4 2.3 2.5 2 1 1 3 3 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF45717 - 4.8e-05 23.1 9.9 0.00017 21.4 9.9 2.0 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF45717 - 0.00028 20.9 3.5 0.00069 19.6 3.5 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF45717 - 0.00075 19.4 9.0 0.00075 19.4 9.0 2.1 2 0 0 2 2 2 1 zinc-RING finger domain Prok-RING_1 PF14446.6 ORF45717 - 0.0029 17.5 6.7 0.02 14.8 3.5 2.4 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 ORF45717 - 0.0084 16.0 5.8 0.0084 16.0 5.8 2.4 2 1 0 2 2 2 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF45717 - 0.0092 16.1 8.0 0.026 14.7 8.0 1.8 1 1 0 1 1 1 1 FANCL C-terminal domain Peptidase_A24 PF01478.18 ORF45717 - 0.0095 16.3 0.2 0.056 13.9 0.0 2.2 2 1 0 2 2 2 1 Type IV leader peptidase family zf-C3HC4_3 PF13920.6 ORF45717 - 0.015 15.2 6.9 0.015 15.2 6.9 2.0 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Baculo_IE-1 PF05290.11 ORF45717 - 0.027 14.4 1.1 0.045 13.7 1.1 1.3 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) zf-RING_6 PF14835.6 ORF45717 - 0.18 11.7 2.1 0.54 10.2 2.1 1.8 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_4 PF14570.6 ORF45717 - 0.23 11.3 6.5 0.47 10.3 6.5 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF45717 - 0.28 11.4 6.5 1.2 9.3 6.4 2.2 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING RINGv PF12906.7 ORF45717 - 0.3 11.2 9.3 0.93 9.7 9.3 1.9 1 0 0 1 1 1 0 RING-variant domain zf-Nse PF11789.8 ORF45717 - 0.53 10.1 3.4 1 9.3 3.4 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_ribbon_17 PF17120.5 ORF45717 - 0.79 9.4 14.4 0.054 13.1 8.6 2.0 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF45717 - 2.3 8.2 10.3 5.5 7.0 10.3 1.7 1 0 0 1 1 1 0 PHD-finger zf-RING-like PF08746.11 ORF45717 - 8 6.9 9.4 20 5.6 9.4 1.7 1 0 0 1 1 1 0 RING-like domain Pkinase PF00069.25 ORF42677 - 3.8e-30 105.1 0.1 4.8e-30 104.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42677 - 1.9e-22 79.8 0.0 2.4e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF42677 - 4.8e-07 28.9 0.0 6.4e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF42677 - 0.0032 17.4 0.0 0.012 15.5 0.0 1.8 2 0 0 2 2 2 1 Phosphotransferase enzyme family Topoisom_bac PF01131.20 ORF42677 - 0.023 13.7 0.0 0.041 12.9 0.0 1.3 1 0 0 1 1 1 0 DNA topoisomerase ABC1 PF03109.16 ORF42677 - 0.024 14.8 0.2 0.41 10.8 0.0 2.3 2 0 0 2 2 2 0 ABC1 family NinG PF05766.12 ORF42677 - 0.32 10.9 5.6 1.1 9.2 0.5 2.3 1 1 1 2 2 2 0 Bacteriophage Lambda NinG protein MFS_1_like PF12832.7 ORF4267 - 2.2e-43 148.6 5.5 3e-43 148.2 5.5 1.0 1 0 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 ORF4267 - 1.1e-10 41.0 24.9 2.5e-07 30.0 5.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 ORF4267 - 0.0094 14.8 2.9 0.016 14.0 2.9 1.5 1 1 0 1 1 1 1 LacY proton/sugar symporter DUF2070 PF09843.9 ORF4267 - 1.5 7.0 7.4 2.2 6.5 7.4 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) SIS PF01380.22 ORF42610 - 2.4e-29 101.8 0.1 4.8e-29 100.9 0.1 1.5 2 0 0 2 2 2 1 SIS domain CBS PF00571.28 ORF42610 - 4.6e-10 39.8 0.1 0.00056 20.3 0.0 2.9 3 0 0 3 3 3 2 CBS domain Thiolase_C PF02803.18 ORF42610 - 0.052 13.2 0.4 0.25 11.0 0.1 2.2 1 1 1 2 2 2 0 Thiolase, C-terminal domain Abhydrolase_3 PF07859.13 ORF33324 - 6.7e-22 78.4 0.0 9.1e-22 77.9 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF33324 - 0.00055 19.3 0.0 0.0067 15.7 0.0 2.1 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Say1_Mug180 PF10340.9 ORF33324 - 0.011 14.7 0.0 0.032 13.1 0.0 1.8 1 1 0 1 1 1 0 Steryl acetyl hydrolase Esterase PF00756.20 ORF33324 - 0.11 12.1 0.0 4.9 6.7 0.0 2.2 2 0 0 2 2 2 0 Putative esterase N_formyltrans_C PF18216.1 ORF33324 - 0.12 12.1 0.1 2.2 8.0 0.0 2.5 2 0 0 2 2 2 0 N-formyltransferase dimerization C-terminal domain Peptidase_M23 PF01551.22 ORF31402 - 1.6e-26 92.3 0.2 3.8e-26 91.1 0.2 1.6 1 0 0 1 1 1 1 Peptidase family M23 Spc7 PF08317.11 ORF31402 - 0.0016 17.4 19.3 0.0023 16.8 19.3 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein V_ATPase_I PF01496.19 ORF31402 - 0.14 10.1 5.1 0.16 9.8 5.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FapA PF03961.13 ORF31402 - 0.23 10.0 9.2 0.33 9.5 9.2 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A p31comet PF06581.12 ORF31402 - 0.4 9.8 2.4 0.62 9.2 2.4 1.2 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding DUF1664 PF07889.12 ORF31402 - 0.7 9.9 4.7 1.5 8.9 4.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) TFIIA PF03153.13 ORF31402 - 0.7 9.8 17.3 0.87 9.5 17.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Vps51 PF08700.11 ORF31402 - 2 8.5 10.0 13 6.0 9.7 2.3 1 1 0 1 1 1 0 Vps51/Vps67 FUSC PF04632.12 ORF31402 - 4.9 5.6 14.0 6.3 5.2 14.0 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF1043 PF06295.12 ORF31402 - 5.5 7.0 18.3 1.1 9.2 13.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) Borrelia_P83 PF05262.11 ORF31402 - 5.5 5.4 16.6 7.5 4.9 16.6 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Phage_GPO PF05929.11 ORF31402 - 6.5 6.3 18.8 0.47 10.0 12.9 2.1 2 1 1 3 3 3 0 Phage capsid scaffolding protein (GPO) serine peptidase DivIVA PF05103.13 ORF31402 - 6.6 6.8 21.5 2.6 8.2 8.5 2.4 1 1 1 2 2 2 0 DivIVA protein TMPIT PF07851.13 ORF31402 - 7.7 5.7 9.7 13 5.0 9.7 1.5 1 0 0 1 1 1 0 TMPIT-like protein Presenilin PF01080.17 ORF31402 - 9.6 4.8 7.8 12 4.5 7.8 1.2 1 0 0 1 1 1 0 Presenilin AAA_13 PF13166.6 ORF31402 - 9.6 4.7 15.0 14 4.2 15.0 1.1 1 0 0 1 1 1 0 AAA domain BACK PF07707.15 ORF30425 - 4.2e-11 42.8 0.8 3.5e-10 39.9 0.4 2.4 2 1 0 3 3 3 1 BTB And C-terminal Kelch BTB PF00651.31 ORF30425 - 7.7e-05 22.9 0.0 0.00017 21.8 0.0 1.6 1 0 0 1 1 1 1 BTB/POZ domain UreD PF01774.17 ORF30425 - 0.035 14.0 0.1 0.18 11.7 0.0 2.1 2 0 0 2 2 2 0 UreD urease accessory protein CRAL_TRIO PF00650.20 ORF2982 - 0.00012 21.9 0.0 0.00018 21.3 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain cNMP_binding PF00027.29 ORF28774 - 1.2e-05 25.2 0.0 2e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Fzo_mitofusin PF04799.13 ORF25043 - 0.066 12.8 0.9 0.1 12.1 0.9 1.2 1 0 0 1 1 1 0 fzo-like conserved region Hamartin PF04388.12 ORF25043 - 0.17 10.5 18.4 0.22 10.1 18.4 1.3 1 0 0 1 1 1 0 Hamartin protein FBPase_glpX PF03320.13 ORF24983 - 2.3e-121 404.4 0.8 2.6e-121 404.2 0.8 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MORN PF02493.20 ORF23346 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat EamA PF00892.20 ORF21757 - 5.4e-46 156.2 36.6 1.2e-28 100.0 12.2 2.2 2 0 0 2 2 2 2 EamA-like transporter family CRT-like PF08627.10 ORF21757 - 0.0003 19.8 3.2 0.0011 18.0 1.8 2.2 2 0 0 2 2 2 1 CRT-like, chloroquine-resistance transporter-like SLC35F PF06027.12 ORF21757 - 0.0036 16.9 8.8 0.0056 16.2 8.8 1.5 1 1 0 1 1 1 1 Solute carrier family 35 DUF3493 PF11998.8 ORF21757 - 0.13 12.5 1.6 2.9 8.1 0.2 3.0 2 0 0 2 2 2 0 Low psii accumulation1 / Rep27 FlaC_arch PF05377.11 ORF19790 - 6.6 7.2 5.9 14 6.2 1.2 2.4 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Lzipper-MIP1 PF14389.6 ORF19790 - 10 6.5 13.6 0.089 13.1 2.4 2.9 2 1 1 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 Pex16 PF08610.10 ORF14882 - 1.1e-17 64.3 0.1 1.6e-17 63.7 0.1 1.2 1 0 0 1 1 1 1 Peroxisomal membrane protein (Pex16) MORN PF02493.20 ORF13924 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat TTL PF03133.15 ORF112439 - 6.8e-69 232.2 0.1 8.8e-69 231.9 0.1 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF112439 - 2.9e-08 33.3 0.0 0.00074 18.8 0.0 2.3 2 0 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF112439 - 0.002 17.4 0.0 0.0039 16.5 0.0 1.4 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp MORN PF02493.20 ORF112111 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat MORN PF02493.20 ORF108434 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat Pkinase PF00069.25 ORF106710 - 3.8e-30 105.1 0.1 4.8e-30 104.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF106710 - 1.9e-22 79.8 0.0 2.4e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF106710 - 4.8e-07 28.9 0.0 6.4e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF106710 - 0.0032 17.4 0.0 0.012 15.5 0.0 1.8 2 0 0 2 2 2 1 Phosphotransferase enzyme family Topoisom_bac PF01131.20 ORF106710 - 0.023 13.7 0.0 0.041 12.9 0.0 1.3 1 0 0 1 1 1 0 DNA topoisomerase ABC1 PF03109.16 ORF106710 - 0.024 14.8 0.2 0.41 10.8 0.0 2.3 2 0 0 2 2 2 0 ABC1 family NinG PF05766.12 ORF106710 - 0.32 10.9 5.6 1.1 9.2 0.5 2.3 1 1 1 2 2 2 0 Bacteriophage Lambda NinG protein Chloroa_b-bind PF00504.21 ORF103704 - 1.4e-42 145.9 0.2 7.3e-30 104.6 0.1 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks45.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks45.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks45.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks45.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PqiA PF04403.13 ORF100563 - 0.0011 18.9 1.7 0.0011 18.9 1.7 2.5 3 0 0 3 3 3 1 Paraquat-inducible protein A Ribosomal_S19e PF01090.19 ORF100563 - 0.094 12.4 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S19e ELH PF02323.15 NODE_20745_length_958_cov_80.400867_g15928_i0forward_frame_1 - 0.0079 15.6 1.6 0.0079 15.6 1.6 1.5 2 0 0 2 2 2 1 Egg-laying hormone precursor Hint PF01079.20 NODE_20745_length_958_cov_80.400867_g15928_i0forward_frame_1 - 0.056 13.0 1.6 0.19 11.2 0.2 2.0 2 0 0 2 2 2 0 Hint module PLDc_2 PF13091.6 NODE_20657_length_961_cov_2.960043_g15859_i0reverse_frame_3 - 9.2e-07 28.8 0.0 2.3e-06 27.5 0.0 1.7 2 0 0 2 2 2 1 PLD-like domain PLDc_N PF13396.6 NODE_20657_length_961_cov_2.960043_g15859_i0reverse_frame_3 - 1.3e-06 28.2 5.8 1.3e-06 28.2 5.8 2.0 2 0 0 2 2 2 1 Phospholipase_D-nuclease N-terminal DUF2207 PF09972.9 NODE_20657_length_961_cov_2.960043_g15859_i0reverse_frame_3 - 1.5 7.5 2.7 1.9 7.1 2.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TPR_MLP1_2 PF07926.12 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0017 18.4 74.1 0.025 14.6 26.6 5.0 1 1 3 4 4 4 3 TPR/MLP1/MLP2-like protein GAS PF13851.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0026 17.2 76.7 0.11 11.8 24.0 3.5 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding HMMR_N PF15905.5 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0029 17.1 32.9 0.0029 17.1 32.9 3.3 1 1 2 3 3 3 2 Hyaluronan mediated motility receptor N-terminal Filament PF00038.21 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0033 17.1 67.2 0.14 11.8 7.9 2.9 1 1 1 2 2 2 2 Intermediate filament protein Fez1 PF06818.15 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.004 17.6 65.4 0.057 13.9 9.8 3.7 1 1 2 3 3 3 2 Fez1 ADIP PF11559.8 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0082 16.2 12.5 0.0082 16.2 12.5 5.0 1 1 3 4 4 4 1 Afadin- and alpha -actinin-Binding MbeD_MobD PF04899.12 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.021 14.9 0.5 0.021 14.9 0.5 4.2 2 2 2 5 5 5 0 MbeD/MobD like Lebercilin PF15619.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.033 13.9 70.9 0.027 14.1 13.0 4.1 1 1 3 4 4 4 0 Ciliary protein causing Leber congenital amaurosis disease DHR10 PF18595.1 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.036 14.1 68.6 0.32 11.0 5.2 4.4 1 1 2 3 3 3 0 Designed helical repeat protein 10 domain HOOK PF05622.12 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.038 12.2 74.5 0.6 8.2 33.7 3.6 1 1 0 2 2 2 0 HOOK protein Spc7 PF08317.11 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.041 12.8 74.6 0.04 12.8 26.3 3.8 1 1 1 3 3 3 0 Spc7 kinetochore protein AAA_13 PF13166.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.044 12.4 66.5 0.23 10.1 41.8 3.0 1 1 2 3 3 3 0 AAA domain SHE3 PF17078.5 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.08 12.7 73.0 2.3 7.9 24.5 4.2 1 1 2 3 3 3 0 SWI5-dependent HO expression protein 3 ATG16 PF08614.11 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.13 12.5 66.5 0.081 13.1 16.3 4.3 1 1 3 4 4 4 0 Autophagy protein 16 (ATG16) TMF_TATA_bd PF12325.8 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.16 12.2 66.1 0.041 14.1 11.3 5.0 1 1 5 6 6 6 0 TATA element modulatory factor 1 TATA binding Laminin_II PF06009.12 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.17 11.9 58.5 0.13 12.3 16.4 4.2 1 1 3 4 4 4 0 Laminin Domain II Cast PF10174.9 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.18 10.0 68.2 0.33 9.1 68.2 1.4 1 1 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone ERM PF00769.19 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.28 11.0 60.5 15 5.3 41.1 3.1 1 1 1 2 2 2 0 Ezrin/radixin/moesin family CALCOCO1 PF07888.11 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.64 8.8 64.1 0.019 13.9 43.6 3.0 1 1 2 3 3 3 0 Calcium binding and coiled-coil domain (CALCOCO1) like TMP_2 PF06791.13 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.67 9.6 4.3 24 4.5 0.2 3.3 3 1 1 4 4 4 0 Prophage tail length tape measure protein DUF4201 PF13870.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.87 9.3 68.4 0.16 11.7 34.2 4.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4201) KASH_CCD PF14662.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.4 8.7 78.3 0.046 13.5 23.2 3.9 1 1 3 4 4 4 0 Coiled-coil region of CCDC155 or KASH APG6_N PF17675.1 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.5 9.4 75.8 0.76 10.3 20.6 4.4 1 1 4 5 5 4 0 Apg6 coiled-coil region BicD PF09730.9 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.7 7.0 67.1 0.084 11.3 11.4 3.0 1 1 2 3 3 3 0 Microtubule-associated protein Bicaudal-D Golgin_A5 PF09787.9 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.7 8.0 71.0 0.89 9.0 32.1 3.1 1 1 2 3 3 3 0 Golgin subfamily A member 5 DUF4407 PF14362.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.7 7.9 52.7 0.38 10.1 11.7 3.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) HAP1_N PF04849.13 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.8 7.7 66.8 2.2 7.4 24.7 3.4 1 1 2 3 3 3 0 HAP1 N-terminal conserved region Tropomyosin PF00261.20 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.8 7.9 70.1 0.97 8.8 44.5 2.5 1 1 1 2 2 2 0 Tropomyosin Tropomyosin_1 PF12718.7 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.8 8.7 82.1 0.2 11.8 16.4 4.0 1 1 3 4 4 4 0 Tropomyosin like MAD PF05557.13 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 2 6.7 74.8 0.052 11.9 56.3 2.9 1 1 2 3 3 3 0 Mitotic checkpoint protein TMPIT PF07851.13 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 2.9 7.1 63.8 0.027 13.7 6.4 4.0 1 1 3 4 4 4 0 TMPIT-like protein Jnk-SapK_ap_N PF09744.9 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 6.9 6.9 72.0 0.37 11.0 16.9 4.2 1 1 4 5 5 5 0 JNK_SAPK-associated protein-1 Snapin_Pallidin PF14712.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 10 6.7 55.6 0.07 13.6 13.4 4.8 2 2 2 4 4 4 0 Snapin/Pallidin D5_N PF08706.11 NODE_20586_length_963_cov_117.552802_g15798_i0reverse_frame_2 - 0.37 11.1 7.2 0.59 10.4 7.2 1.3 1 0 0 1 1 1 0 D5 N terminal like DUF5401 PF17380.2 NODE_20586_length_963_cov_117.552802_g15798_i0reverse_frame_2 - 1.6 6.7 19.5 2 6.4 19.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Borrelia_P83 PF05262.11 NODE_20586_length_963_cov_117.552802_g15798_i0reverse_frame_2 - 4.7 5.6 25.2 6.5 5.1 25.2 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein TRP PF06011.12 ORF93457 - 1.8e-07 30.3 9.1 2.5e-07 29.8 9.1 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Peptidase_A24 PF01478.18 ORF93457 - 0.02 15.3 0.6 0.02 15.3 0.6 2.6 2 1 0 2 2 2 0 Type IV leader peptidase family Succ_DH_flav_C PF02910.20 ORF86343 - 2e-39 134.5 0.1 3.1e-39 133.9 0.1 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term FAD_binding_2 PF00890.24 ORF86343 - 2.7e-31 109.1 0.1 2.3e-30 106.0 0.0 2.0 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF86343 - 0.0032 16.8 0.0 0.0049 16.2 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Myb_DNA-bind_4 PF13837.6 ORF86343 - 0.054 13.9 0.0 0.29 11.6 0.0 2.1 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain Geminin PF07412.12 ORF85837 - 0.057 13.1 0.3 0.11 12.3 0.3 1.3 1 0 0 1 1 1 0 Geminin P_C10 PF14974.6 ORF8567 - 5e-06 26.6 2.5 2.2e-05 24.5 0.0 2.8 3 0 0 3 3 3 1 Protein C10 TPR_1 PF00515.28 ORF8567 - 5.3e-05 22.9 1.2 0.096 12.5 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF8567 - 0.00011 22.6 2.1 0.00011 22.6 2.1 2.6 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF8567 - 0.00018 21.4 7.4 0.013 15.5 0.1 3.0 3 0 0 3 3 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF8567 - 0.00035 20.7 1.4 0.00073 19.6 1.4 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat DUF3856 PF12968.7 ORF8567 - 0.00091 19.3 1.2 0.005 16.9 1.2 2.2 1 1 0 1 1 1 1 Domain of Unknown Function (DUF3856) TPR_16 PF13432.6 ORF8567 - 0.0011 19.6 1.4 0.0011 19.6 1.4 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat BTAD PF03704.17 ORF8567 - 0.002 18.6 4.2 0.002 18.6 4.2 2.7 2 2 0 2 2 2 1 Bacterial transcriptional activator domain ANAPC3 PF12895.7 ORF8567 - 0.0025 18.0 0.4 0.0063 16.7 0.4 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.6 ORF8567 - 0.0035 17.4 0.0 0.015 15.5 0.0 2.2 1 0 0 1 1 1 1 Tetratricopeptide repeat SRP_TPR_like PF17004.5 ORF8567 - 0.027 14.5 0.4 0.027 14.5 0.4 1.8 2 0 0 2 2 2 0 Putative TPR-like repeat TPR_14 PF13428.6 ORF8567 - 0.034 14.9 6.9 0.11 13.4 0.3 3.2 2 1 1 3 3 3 0 Tetratricopeptide repeat Vinculin PF01044.19 ORF8567 - 0.036 12.3 3.6 0.059 11.6 3.6 1.2 1 0 0 1 1 1 0 Vinculin family TPR_6 PF13174.6 ORF8567 - 0.33 11.7 0.1 0.33 11.7 0.1 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF4192 PF13830.6 ORF8567 - 0.38 10.8 0.0 0.38 10.8 0.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4192) TPR_17 PF13431.6 ORF8567 - 0.48 10.9 1.9 13 6.4 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF8567 - 0.91 9.9 6.5 0.45 10.8 2.0 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat Pkinase PF00069.25 ORF78354 - 3.4e-82 275.8 0.0 4.1e-82 275.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78354 - 4.9e-41 140.7 0.0 6.1e-41 140.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF78354 - 2.9e-05 23.5 0.0 6.9e-05 22.3 0.0 1.6 2 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF78354 - 0.0017 17.8 0.0 0.0027 17.1 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family ABC1 PF03109.16 ORF78354 - 0.016 15.4 0.1 0.033 14.4 0.1 1.5 1 0 0 1 1 1 0 ABC1 family APH PF01636.23 ORF78354 - 0.017 15.1 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 ORF78354 - 0.031 13.8 0.0 0.061 12.8 0.0 1.4 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF78354 - 0.065 12.0 0.0 0.082 11.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase DUF547 PF04784.14 ORF78023 - 2e-15 56.9 0.0 1e-14 54.6 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function, DUF547 DUF99 PF01949.16 ORF78023 - 0.013 14.9 0.1 0.026 13.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF99 DUF2838 PF10998.8 ORF77467 - 1.8e-24 86.1 10.9 1.8e-24 86.1 10.9 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF2838) DUF402 PF04167.13 ORF77467 - 0.23 11.7 2.6 0.34 11.1 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF402) Asp PF00026.23 ORF76675 - 2.7e-20 73.0 0.1 3.3e-20 72.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF76675 - 0.0032 17.3 0.0 0.0098 15.7 0.0 1.7 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal adh_short PF00106.25 ORF75053 - 8.8e-34 116.7 0.1 1.4e-33 116.1 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF75053 - 8.5e-21 74.6 0.0 1.2e-20 74.1 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF75053 - 0.0011 18.9 0.0 0.0016 18.4 0.0 1.3 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 ORF75053 - 0.008 16.1 0.1 0.014 15.3 0.1 1.4 1 0 0 1 1 1 1 NAD(P)H-binding ApbA PF02558.16 ORF75053 - 0.014 15.0 0.0 0.028 14.0 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 ORF75053 - 0.053 13.4 0.0 0.084 12.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Adenylsucc_synt PF00709.21 ORF75053 - 0.056 12.4 0.0 0.086 11.7 0.0 1.2 1 0 0 1 1 1 0 Adenylosuccinate synthetase Vut_1 PF02592.15 ORF74881 - 0.0018 18.6 3.1 1.3 9.3 0.5 2.6 2 1 1 3 3 3 2 Putative vitamin uptake transporter ABC_tran PF00005.27 ORF71287 - 7.8e-12 45.9 0.0 1.5e-11 44.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF71287 - 4.7e-08 33.2 0.0 8.5e-08 32.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system efThoc1 PF11957.8 ORF71287 - 0.068 11.8 0.0 0.27 9.9 0.0 1.7 2 0 0 2 2 2 0 THO complex subunit 1 transcription elongation factor Rotamase PF00639.21 ORF67978 - 3.1e-15 56.9 0.4 1.1e-14 55.2 0.0 2.1 3 0 0 3 3 3 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF67978 - 1.3e-10 41.8 0.0 4.8e-10 40.0 0.0 1.9 1 1 0 1 1 1 1 PPIC-type PPIASE domain PP2C PF00481.21 ORF67978 - 9e-05 22.2 0.0 0.00017 21.3 0.0 1.5 1 0 0 1 1 1 1 Protein phosphatase 2C Rotamase_2 PF13145.6 ORF67978 - 0.014 16.3 0.1 0.076 13.9 0.0 2.2 2 1 1 3 3 3 0 PPIC-type PPIASE domain Ubiq_cyt_C_chap PF03981.12 ORF66869 - 0.04 14.0 0.0 0.075 13.1 0.0 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone CUTL PF16557.5 ORF66869 - 0.16 12.2 0.2 0.42 10.8 0.2 1.7 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB MFS_1 PF07690.16 ORF65852 - 3.5e-35 121.6 28.3 1.7e-21 76.6 14.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF65852 - 9.2e-06 24.8 0.6 9.2e-06 24.8 0.6 2.4 2 1 0 2 2 2 1 Sugar (and other) transporter MFS_3 PF05977.13 ORF65852 - 1.9e-05 23.3 14.9 0.00028 19.4 10.3 2.1 1 1 1 2 2 2 2 Transmembrane secretion effector MFS_1_like PF12832.7 ORF65852 - 0.007 15.3 9.0 0.026 13.4 0.2 3.2 3 0 0 3 3 3 1 MFS_1 like family ABC_tran PF00005.27 ORF63034 - 7.8e-12 45.9 0.0 1.5e-11 44.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF63034 - 4.7e-08 33.2 0.0 8.5e-08 32.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system efThoc1 PF11957.8 ORF63034 - 0.068 11.8 0.0 0.27 9.9 0.0 1.7 2 0 0 2 2 2 0 THO complex subunit 1 transcription elongation factor AAA_30 PF13604.6 ORF6121 - 3.4e-11 43.2 0.0 2.7e-10 40.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF6121 - 1.5e-08 34.7 0.4 0.0014 18.4 0.2 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 ORF6121 - 0.0009 19.6 0.3 0.066 13.5 0.3 2.7 1 1 0 1 1 1 1 AAA domain Herpes_Helicase PF02689.14 ORF6121 - 0.017 13.1 0.0 0.023 12.6 0.0 1.1 1 0 0 1 1 1 0 Helicase IstB_IS21 PF01695.17 ORF6121 - 0.033 13.9 0.0 0.055 13.2 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_11 PF13086.6 ORF6121 - 0.035 13.9 0.4 6 6.6 0.0 2.2 1 1 1 2 2 2 0 AAA domain AAA PF00004.29 ORF6121 - 0.055 13.9 0.0 0.17 12.3 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Pkinase PF00069.25 ORF58027 - 3.4e-82 275.8 0.0 4.1e-82 275.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58027 - 4.9e-41 140.7 0.0 6.1e-41 140.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF58027 - 2.9e-05 23.5 0.0 6.9e-05 22.3 0.0 1.6 2 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF58027 - 0.0017 17.8 0.0 0.0027 17.1 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family ABC1 PF03109.16 ORF58027 - 0.016 15.4 0.1 0.033 14.4 0.1 1.5 1 0 0 1 1 1 0 ABC1 family APH PF01636.23 ORF58027 - 0.017 15.1 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 ORF58027 - 0.031 13.8 0.0 0.061 12.8 0.0 1.4 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF58027 - 0.065 12.0 0.0 0.082 11.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase FAD_binding_6 PF00970.24 ORF5630 - 2.4e-34 117.6 0.0 3.6e-34 117.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF5630 - 1.4e-24 86.8 0.0 2.2e-24 86.2 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 ORF5630 - 5.6e-06 26.6 0.0 0.00019 21.6 0.0 2.3 1 1 1 2 2 2 1 Ferric reductase NAD binding domain UDPGT PF00201.18 ORF55323 - 1.7e-27 96.4 0.2 2.2e-27 96.0 0.2 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_1_4 PF13692.6 ORF55323 - 0.069 13.6 0.1 0.57 10.6 0.0 2.3 2 1 0 3 3 3 0 Glycosyl transferases group 1 DUF1778 PF08681.11 ORF5300 - 0.12 12.3 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1778) Osmo_CC PF08946.10 ORF51906 - 0.047 13.9 0.9 1.7 9.0 0.2 2.5 2 0 0 2 2 2 0 Osmosensory transporter coiled coil Baculo_PEP_C PF04513.12 ORF51906 - 0.054 13.5 2.0 0.16 12.0 1.2 1.9 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus CorA PF01544.18 ORF51906 - 0.26 10.5 1.8 0.36 10.1 1.8 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Fzo_mitofusin PF04799.13 ORF51906 - 0.48 10.0 11.7 0.093 12.3 6.5 2.1 2 0 0 2 2 2 0 fzo-like conserved region Plk4_PB2 PF18409.1 ORF51906 - 0.57 10.9 4.0 0.25 12.0 1.9 1.5 2 0 0 2 2 2 0 Polo-like Kinase 4 Polo Box 2 Remorin_C PF03763.13 ORF51906 - 9.5 6.2 14.8 1.7 8.5 7.5 2.2 1 1 1 2 2 2 0 Remorin, C-terminal region AAA_30 PF13604.6 ORF44412 - 3.4e-11 43.2 0.0 2.7e-10 40.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF44412 - 1.5e-08 34.7 0.4 0.0014 18.4 0.2 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 ORF44412 - 0.0009 19.6 0.3 0.066 13.5 0.3 2.7 1 1 0 1 1 1 1 AAA domain Herpes_Helicase PF02689.14 ORF44412 - 0.017 13.1 0.0 0.023 12.6 0.0 1.1 1 0 0 1 1 1 0 Helicase IstB_IS21 PF01695.17 ORF44412 - 0.033 13.9 0.0 0.055 13.2 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_11 PF13086.6 ORF44412 - 0.035 13.9 0.4 6 6.6 0.0 2.2 1 1 1 2 2 2 0 AAA domain AAA PF00004.29 ORF44412 - 0.055 13.9 0.0 0.17 12.3 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF3439 PF11921.8 ORF42691 - 0.058 13.4 1.1 0.11 12.4 1.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Vut_1 PF02592.15 ORF39986 - 0.0018 18.6 3.1 1.3 9.3 0.5 2.6 2 1 1 3 3 3 2 Putative vitamin uptake transporter Rotamase PF00639.21 ORF34772 - 7.4e-14 52.5 0.0 1.2e-13 51.8 0.0 1.4 1 0 0 1 1 1 1 PPIC-type PPIASE domain PP2C PF00481.21 ORF34772 - 1.3e-12 47.9 0.0 8.1e-12 45.3 0.0 2.0 1 1 0 1 1 1 1 Protein phosphatase 2C Rotamase_3 PF13616.6 ORF34772 - 9e-12 45.6 0.0 1.4e-11 44.9 0.0 1.2 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF34772 - 0.0086 16.9 0.0 0.016 16.0 0.0 1.5 1 0 0 1 1 1 1 PPIC-type PPIASE domain PP2C_2 PF13672.6 ORF34772 - 0.069 12.8 0.9 0.37 10.4 0.0 2.3 3 0 0 3 3 3 0 Protein phosphatase 2C EF-hand_6 PF13405.6 ORF34109 - 1.6e-11 43.2 0.4 9.6e-07 28.3 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF34109 - 4.6e-10 38.3 1.0 1.8e-05 24.0 0.1 2.8 2 0 0 2 2 2 2 EF hand Ion_trans PF00520.31 ORF34109 - 2.1e-08 33.7 6.3 2.8e-08 33.3 6.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF34109 - 4.8e-07 30.1 0.6 1.3e-06 28.7 0.6 1.8 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF34109 - 2.6e-05 23.9 0.2 0.064 13.1 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF34109 - 3.5e-05 23.1 0.6 0.085 12.4 0.1 2.6 2 0 0 2 2 2 2 EF hand GHMP_kinases_N PF00288.26 ORF28892 - 2.3e-11 43.7 0.2 6.3e-11 42.4 0.0 1.9 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 ORF28892 - 1.7e-09 37.9 0.2 3.2e-09 37.0 0.2 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal Tmemb_14 PF03647.13 ORF28892 - 0.0093 16.7 0.0 0.022 15.5 0.0 1.6 1 0 0 1 1 1 1 Transmembrane proteins 14C COG2 PF06148.11 ORF28573 - 0.4 10.8 19.2 1 9.5 4.6 3.4 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Fez1 PF06818.15 ORF28573 - 1.7 9.1 36.5 0.14 12.6 19.7 2.5 1 1 1 2 2 2 0 Fez1 ADIP PF11559.8 ORF28573 - 2.1 8.4 34.9 4.1 7.5 7.6 3.4 3 0 0 3 3 3 0 Afadin- and alpha -actinin-Binding DUF1664 PF07889.12 ORF28573 - 8.3 6.5 21.6 0.77 9.8 1.7 3.5 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) SIR2 PF02146.17 ORF26876 - 5.7e-37 127.3 0.0 3.8e-36 124.7 0.0 1.9 1 1 0 1 1 1 1 Sir2 family HECT_2 PF09814.9 ORF26876 - 0.088 11.6 0.1 0.14 10.9 0.1 1.4 1 0 0 1 1 1 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding DZR PF12773.7 ORF26876 - 0.1 12.6 1.4 0.45 10.6 1.6 1.9 1 1 1 2 2 2 0 Double zinc ribbon DUF5609 PF18429.1 ORF26876 - 0.11 12.3 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5609) RNA_POL_M_15KD PF02150.16 ORF26876 - 0.11 12.4 0.9 0.51 10.2 0.0 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit PriA_CRR PF18319.1 ORF26876 - 0.18 11.8 1.9 10 6.2 0.7 2.3 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain CP12 PF02672.15 ORF2635 - 0.17 12.6 0.0 0.17 12.6 0.0 1.8 2 0 0 2 2 2 0 CP12 domain NYD-SP28_assoc PF14775.6 ORF23387 - 6.7e-19 67.8 5.6 1.3e-18 66.8 5.6 1.5 1 0 0 1 1 1 1 Sperm tail C-terminal domain Secretin_N_2 PF07655.13 ORF23387 - 0.26 11.8 3.7 1.4 9.5 0.1 2.2 2 0 0 2 2 2 0 Secretin N-terminal domain Asp PF00026.23 ORF21393 - 0.004 16.6 0.0 0.022 14.2 0.0 2.0 2 1 0 2 2 2 1 Eukaryotic aspartyl protease DUF3443 PF11925.8 ORF21393 - 0.047 12.5 0.0 0.074 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3443) COG2 PF06148.11 ORF20865 - 0.4 10.8 19.2 1 9.5 4.6 3.4 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Fez1 PF06818.15 ORF20865 - 1.7 9.1 36.5 0.14 12.6 19.7 2.5 1 1 1 2 2 2 0 Fez1 ADIP PF11559.8 ORF20865 - 2.1 8.4 34.9 4.1 7.5 7.6 3.4 3 0 0 3 3 3 0 Afadin- and alpha -actinin-Binding DUF1664 PF07889.12 ORF20865 - 8.3 6.5 21.6 0.77 9.8 1.7 3.5 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Acyltransferase PF01553.21 ORF18243 - 3.8e-07 29.8 0.0 5.8e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Acyltransferase DnaJ PF00226.31 ORF15090 - 4e-14 52.5 0.0 1.1e-13 51.1 0.0 1.8 1 1 0 1 1 1 1 DnaJ domain TrbE PF11100.8 ORF14145 - 0.052 13.8 0.8 0.052 13.8 0.8 2.4 2 0 0 2 2 2 0 Conjugal transfer protein TrbE DUF3140 PF11338.8 ORF14145 - 0.06 13.8 0.8 1 9.9 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3140) m04gp34like PF12216.8 ORF14145 - 1.6 8.2 5.3 2.2 7.8 0.1 2.8 2 1 1 3 3 3 0 Immune evasion protein Rotamase PF00639.21 ORF13932 - 7.4e-14 52.5 0.0 1.2e-13 51.8 0.0 1.4 1 0 0 1 1 1 1 PPIC-type PPIASE domain PP2C PF00481.21 ORF13932 - 1.3e-12 47.9 0.0 8.1e-12 45.3 0.0 2.0 1 1 0 1 1 1 1 Protein phosphatase 2C Rotamase_3 PF13616.6 ORF13932 - 9e-12 45.6 0.0 1.4e-11 44.9 0.0 1.2 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF13932 - 0.0086 16.9 0.0 0.016 16.0 0.0 1.5 1 0 0 1 1 1 1 PPIC-type PPIASE domain PP2C_2 PF13672.6 ORF13932 - 0.069 12.8 0.9 0.37 10.4 0.0 2.3 3 0 0 3 3 3 0 Protein phosphatase 2C Porphobil_deam PF01379.20 ORF12751 - 4.5e-82 274.5 0.0 5.8e-82 274.1 0.0 1.2 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 ORF12751 - 1.3e-25 89.6 0.1 2.3e-25 88.8 0.1 1.4 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain DUF547 PF04784.14 ORF109585 - 2e-15 56.9 0.0 1e-14 54.6 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function, DUF547 DUF99 PF01949.16 ORF109585 - 0.013 14.9 0.1 0.026 13.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF99 Sulf_transp PF04143.14 ORF108937 - 7.1e-96 321.4 33.5 8e-96 321.2 33.5 1.0 1 0 0 1 1 1 1 Sulphur transport COX2-transmemb PF09125.10 ORF108937 - 0.29 11.0 1.9 0.56 10.1 0.3 2.4 2 0 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane BTB PF00651.31 ORF105697 - 2.4e-14 53.5 0.0 4.6e-14 52.6 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain UQ_con PF00179.26 ORF102451 - 4.3e-05 23.2 0.0 8.6e-05 22.2 0.0 1.6 1 1 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF102451 - 0.012 15.3 0.0 0.02 14.6 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family B Cas9_a PF18470.1 ORF102451 - 0.15 11.5 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Cas9 alpha-helical lobe domain Ank_2 PF12796.7 ORF101970 - 5.2e-42 142.3 14.9 1.4e-15 57.6 0.8 3.3 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF101970 - 5.7e-24 81.6 7.8 0.00058 20.1 0.0 6.4 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF101970 - 2.7e-18 65.8 11.0 0.0024 18.1 0.0 6.5 1 1 5 6 6 6 5 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF101970 - 4.2e-18 65.5 5.3 5.1e-08 33.3 0.2 4.2 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF101970 - 4.8e-15 55.2 13.2 0.016 15.6 0.0 5.8 6 0 0 6 6 6 5 Ankyrin repeat TPR_2 PF07719.17 ORF101970 - 0.0078 16.3 0.1 1.5 9.1 0.0 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF1687 PF07955.11 ORF101970 - 0.015 15.8 0.0 0.027 15.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1687) TPR_1 PF00515.28 ORF101970 - 0.019 14.8 0.0 1.3 9.0 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF101970 - 0.024 14.8 0.1 1.8 9.0 0.0 3.1 2 0 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 ORF101970 - 0.03 14.4 0.1 0.27 11.3 0.1 2.4 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain TPR_12 PF13424.6 ORF101970 - 0.045 14.0 1.4 0.92 9.8 0.1 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF101970 - 0.19 12.4 0.6 1.5 9.6 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat tRNA_lig_kinase PF08303.11 NODE_20827_length_956_cov_88.184582_g15995_i0reverse_frame_1 - 0.013 15.6 0.6 0.013 15.6 0.6 1.7 2 0 0 2 2 2 0 tRNA ligase kinase domain Glyco_hydro_38N PF01074.22 NODE_20797_length_956_cov_764.055375_g12620_i6forward_frame_1 - 7.4e-69 232.3 8.0 1e-68 231.8 8.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Polysacc_deac_1 PF01522.21 NODE_20797_length_956_cov_764.055375_g12620_i6forward_frame_1 - 0.00035 20.5 0.1 0.00063 19.6 0.1 1.5 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 NODE_20797_length_956_cov_764.055375_g12620_i6forward_frame_1 - 0.017 14.3 0.1 0.022 14.0 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 FTO_NTD PF12933.7 NODE_20797_length_956_cov_764.055375_g12620_i6forward_frame_1 - 0.03 13.6 0.3 0.46 9.7 0.1 2.0 1 1 1 2 2 2 0 FTO catalytic domain Glyco_hydro_38N PF01074.22 NODE_20796_length_956_cov_888.016287_g12620_i5reverse_frame_1 - 2.3e-68 230.7 7.9 3.2e-68 230.2 7.9 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Polysacc_deac_1 PF01522.21 NODE_20796_length_956_cov_888.016287_g12620_i5reverse_frame_1 - 0.00043 20.2 0.1 0.00089 19.2 0.1 1.6 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 NODE_20796_length_956_cov_888.016287_g12620_i5reverse_frame_1 - 0.032 13.4 0.1 0.038 13.2 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 Glyco_hydro_38N PF01074.22 NODE_20795_length_956_cov_902.693811_g12620_i4forward_frame_1 - 2.1e-68 230.8 7.9 3.2e-68 230.2 7.9 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Polysacc_deac_1 PF01522.21 NODE_20795_length_956_cov_902.693811_g12620_i4forward_frame_1 - 0.00061 19.7 0.8 0.00089 19.2 0.1 1.7 2 0 0 2 2 2 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 NODE_20795_length_956_cov_902.693811_g12620_i4forward_frame_1 - 0.026 13.7 0.1 0.032 13.4 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 Glyco_hydro_38N PF01074.22 NODE_20794_length_956_cov_976.395223_g12620_i3forward_frame_1 - 2.2e-68 230.8 7.9 3.2e-68 230.2 7.9 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Polysacc_deac_1 PF01522.21 NODE_20794_length_956_cov_976.395223_g12620_i3forward_frame_1 - 0.00045 20.1 0.1 0.00089 19.2 0.1 1.6 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 NODE_20794_length_956_cov_976.395223_g12620_i3forward_frame_1 - 0.031 13.5 0.1 0.037 13.2 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 Sigma_reg_N PF13800.6 NODE_20790_length_957_cov_76.911063_g15966_i0reverse_frame_1 - 1.9 8.8 6.7 0.24 11.7 1.3 2.3 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF1841 PF08897.11 NODE_20745_length_958_cov_80.400867_g15928_i0forward_frame_2 - 0.069 13.2 1.3 0.2 11.7 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1841) ADIP PF11559.8 NODE_20686_length_959_cov_773.825758_g12986_i2forward_frame_3 - 0.00082 19.5 4.1 0.00082 19.5 4.1 2.5 1 1 1 3 3 3 1 Afadin- and alpha -actinin-Binding DMPK_coil PF08826.10 NODE_20686_length_959_cov_773.825758_g12986_i2forward_frame_3 - 0.26 11.4 1.9 0.44 10.7 0.7 2.0 2 0 0 2 2 2 0 DMPK coiled coil domain like DivIC PF04977.15 NODE_20686_length_959_cov_773.825758_g12986_i2forward_frame_3 - 3.6 7.4 9.0 0.59 9.9 0.3 3.1 3 1 1 4 4 4 0 Septum formation initiator Fzo_mitofusin PF04799.13 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 0.015 14.9 1.9 0.015 14.9 1.9 2.6 1 1 1 2 2 2 0 fzo-like conserved region Spc7 PF08317.11 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 0.04 12.8 21.8 0.059 12.3 21.8 1.4 1 0 0 1 1 1 0 Spc7 kinetochore protein MitMem_reg PF13012.6 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 0.1 13.0 7.3 0.61 10.5 7.3 2.3 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function DUF3287 PF11690.8 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 0.16 11.7 8.0 0.51 10.1 1.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3287) Prominin PF05478.11 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 0.4 8.6 11.8 0.64 7.9 11.8 1.3 1 0 0 1 1 1 0 Prominin TMPIT PF07851.13 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 0.55 9.4 14.0 0.94 8.7 14.0 1.4 1 0 0 1 1 1 0 TMPIT-like protein RsbRD_N PF14361.6 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 0.86 10.3 8.5 9.1 7.0 0.1 3.2 1 1 1 3 3 3 0 RsbT co-antagonist protein rsbRD N-terminal domain Prefoldin PF02996.17 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 1.3 8.9 19.9 2 8.3 2.2 2.9 3 0 0 3 3 3 0 Prefoldin subunit FadA PF09403.10 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 2.4 8.7 26.3 2.9 8.4 0.1 3.0 2 1 0 2 2 2 0 Adhesion protein FadA LMBR1 PF04791.16 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 4.1 6.2 8.7 4.9 5.9 8.7 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Tweety PF04906.13 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 4.2 5.9 5.9 6.7 5.3 0.2 2.2 1 1 1 2 2 2 0 Tweety ZapD PF07072.11 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 6.4 6.5 12.1 1 9.1 4.6 2.3 1 1 1 2 2 2 0 Cell division protein DUF948 PF06103.11 NODE_20682_length_960_cov_2.939459_g15879_i0reverse_frame_3 - 9.4 6.6 15.9 0.96 9.7 3.1 3.7 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) DPPIV_N PF00930.21 ORF99426 - 0.0055 15.5 0.3 0.0088 14.8 0.3 1.2 1 0 0 1 1 1 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region Phage_TAC_5 PF08890.11 ORF98743 - 0.9 9.5 5.2 0.15 12.1 1.2 1.7 2 0 0 2 2 2 0 Phage XkdN-like tail assembly chaperone protein, TAC cNMP_binding PF00027.29 ORF9551 - 9.8e-09 35.2 0.1 4.5e-08 33.1 0.0 2.0 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain Ion_trans PF00520.31 ORF9551 - 1.2e-08 34.6 5.5 1.6e-08 34.1 5.5 1.3 1 0 0 1 1 1 1 Ion transport protein Citrate_synt PF00285.21 ORF95232 - 7.9e-97 324.5 0.0 8.8e-97 324.4 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Hexapep PF00132.24 ORF94943 - 0.00013 21.6 6.5 0.0071 16.0 1.3 3.1 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF94943 - 0.0009 18.9 0.3 0.0009 18.9 0.3 3.1 3 1 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase Peptidase_S51 PF03575.17 ORF93629 - 3.4e-25 88.9 0.0 3.4e-24 85.7 0.0 2.0 1 1 0 1 1 1 1 Peptidase family S51 ADK PF00406.22 ORF92106 - 5.2e-54 182.4 0.0 6.9e-54 182.0 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF92106 - 4.3e-24 85.5 0.0 8.3e-24 84.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain ADK_lid PF05191.14 ORF92106 - 1.9e-12 46.9 0.0 3.7e-12 46.0 0.0 1.5 1 0 0 1 1 1 1 Adenylate kinase, active site lid Hydin_ADK PF17213.3 ORF92106 - 0.00023 21.5 0.2 0.19 12.0 0.1 2.3 1 1 1 2 2 2 2 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 ORF92106 - 0.059 13.5 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain TPR_14 PF13428.6 ORF91451 - 1.5e-06 28.5 2.4 0.027 15.3 0.1 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF91451 - 1.5e-06 28.1 0.4 0.0031 17.5 0.1 2.4 2 0 0 2 2 2 2 Fis1 C-terminal tetratricopeptide repeat TPR_2 PF07719.17 ORF91451 - 1.1e-05 25.2 0.2 0.0037 17.3 0.1 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF91451 - 1.2e-05 25.4 0.1 3.1e-05 24.0 0.1 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF91451 - 1.9e-05 24.3 0.3 6.3e-05 22.6 0.2 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF91451 - 0.00021 21.7 5.7 0.051 14.1 0.4 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF91451 - 0.00063 19.8 0.1 0.0067 16.6 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF91451 - 0.0046 17.6 2.7 0.021 15.5 0.0 3.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF91451 - 0.006 16.2 0.2 0.016 14.9 0.0 1.8 2 0 0 2 2 2 1 TPR repeat TPR_17 PF13431.6 ORF91451 - 0.2 12.1 0.7 17 6.1 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat RRM_1 PF00076.22 ORF9053 - 1.6e-19 69.5 0.0 5.8e-10 38.8 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 ORF9053 - 2.3e-05 24.3 0.0 0.048 13.7 0.0 2.3 2 0 0 2 2 2 2 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 ORF9053 - 0.0034 17.5 0.1 3.4 7.8 0.0 2.5 2 1 0 2 2 2 2 RNA recognition motif RNA_bind PF08675.11 ORF9053 - 0.02 14.9 0.0 0.68 10.0 0.0 2.7 3 0 0 3 3 3 0 RNA binding domain RL PF17797.1 ORF9053 - 0.11 12.5 0.0 21 5.1 0.0 2.3 2 0 0 2 2 2 0 RL domain DUF1707 PF08044.11 ORF86617 - 0.024 14.7 1.2 0.058 13.5 1.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1707) Glyco_hydro_92 PF07971.12 ORF84141 - 4.2e-45 154.5 0.0 5.2e-45 154.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 92 BPD_transp_1 PF00528.22 ORF8348 - 2e-17 63.5 20.4 2e-17 63.5 20.4 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1158 PF06643.11 ORF8348 - 0.059 13.9 0.1 0.059 13.9 0.1 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1158) Glyco_hydro_38N PF01074.22 ORF733 - 1.6e-34 119.6 0.2 2.1e-34 119.2 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF733 - 0.00056 20.0 0.0 0.0015 18.7 0.0 1.7 1 0 0 1 1 1 1 Alpha mannosidase middle domain PKD_channel PF08016.12 ORF70407 - 0.00031 19.5 20.2 0.011 14.4 8.1 2.1 2 0 0 2 2 2 2 Polycystin cation channel DUF2973 PF11189.8 ORF70407 - 0.18 11.9 3.3 6.8 6.9 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2973) PKD_channel PF08016.12 ORF67411 - 0.00031 19.5 20.2 0.011 14.4 8.1 2.1 2 0 0 2 2 2 2 Polycystin cation channel DUF2973 PF11189.8 ORF67411 - 0.18 11.9 3.3 6.8 6.9 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2973) Citrate_synt PF00285.21 ORF66349 - 8.8e-98 327.7 0.0 9.7e-98 327.5 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain EF-hand_7 PF13499.6 ORF64987 - 1.5e-08 35.0 0.0 2.6e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF64987 - 6.4e-05 22.6 0.0 0.0069 16.2 0.0 2.6 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF64987 - 0.00031 20.1 0.0 0.011 15.2 0.0 2.5 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF64987 - 0.017 15.0 0.1 13 5.8 0.0 3.2 2 1 1 3 3 3 0 EF-hand domain pair Guanylate_cyc PF00211.20 ORF53070 - 7.5e-45 152.8 1.7 1e-44 152.4 1.7 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain DPPIV_N PF00930.21 ORF47083 - 0.0055 15.5 0.3 0.0088 14.8 0.3 1.2 1 0 0 1 1 1 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region Phage_TAC_5 PF08890.11 ORF46350 - 0.9 9.5 5.2 0.15 12.1 1.2 1.7 2 0 0 2 2 2 0 Phage XkdN-like tail assembly chaperone protein, TAC Peripla_BP_3 PF13377.6 ORF45042 - 6.9e-33 114.3 0.3 1.5e-32 113.2 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF45042 - 2.4e-23 83.0 0.3 3.1e-23 82.6 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF45042 - 1e-15 58.1 0.1 1.4e-15 57.6 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain MFS_1 PF07690.16 ORF43375 - 7.5e-12 44.8 16.7 7.5e-12 44.8 16.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Peripla_BP_3 PF13377.6 ORF42367 - 6.9e-33 114.3 0.3 1.5e-32 113.2 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF42367 - 2.4e-23 83.0 0.3 3.1e-23 82.6 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF42367 - 1e-15 58.1 0.1 1.4e-15 57.6 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain FRB_dom PF08771.11 ORF41300 - 8.6e-27 93.5 1.6 8.6e-27 93.5 1.6 2.1 2 0 0 2 2 2 1 FKBP12-rapamycin binding domain PI3_PI4_kinase PF00454.27 ORF41300 - 2.5e-15 57.0 1.0 9.7e-15 55.1 0.0 2.2 2 1 0 2 2 2 1 Phosphatidylinositol 3- and 4-kinase DUF3102 PF11300.8 ORF41300 - 0.0033 17.7 2.0 0.0054 17.0 2.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3102) Flg_bbr_C PF06429.13 ORF40773 - 1.9e-08 34.3 2.1 4.4e-08 33.1 2.1 1.6 1 0 0 1 1 1 1 Flagellar basal body rod FlgEFG protein C-terminal Integrase_Zn PF02022.19 ORF34372 - 0.0017 18.3 9.3 2.9 7.9 0.0 5.0 5 0 0 5 5 5 4 Integrase Zinc binding domain adh_short PF00106.25 ORF33277 - 2.2e-42 144.8 0.3 3.1e-42 144.3 0.3 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF33277 - 7.3e-28 97.7 0.2 1.2e-27 97.0 0.2 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF33277 - 3.8e-08 33.5 1.1 2.7e-07 30.7 1.1 1.9 1 1 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 ORF33277 - 0.0041 17.0 0.2 0.0073 16.2 0.2 1.4 1 0 0 1 1 1 1 NAD(P)H-binding ApbA PF02558.16 ORF33277 - 0.064 12.9 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Epimerase PF01370.21 ORF33277 - 0.18 11.2 0.1 0.58 9.6 0.0 1.7 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family PUB PF09409.10 ORF31255 - 1.2e-09 38.0 0.0 2.4e-09 37.0 0.0 1.5 1 0 0 1 1 1 1 PUB domain DUF4050 PF13259.6 ORF31255 - 0.59 10.4 6.7 0.92 9.8 6.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) NPR3 PF03666.13 ORF31255 - 2.1 7.0 8.1 2.5 6.8 8.1 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 ORF31255 - 3.2 6.4 12.7 4.2 6.0 12.7 1.1 1 0 0 1 1 1 0 Presenilin HemY_N PF07219.13 ORF31255 - 5.7 7.2 9.2 13 6.0 9.2 1.7 1 0 0 1 1 1 0 HemY protein N-terminus Citrate_synt PF00285.21 ORF29710 - 1.7e-97 326.7 0.0 1.9e-97 326.6 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Wtap PF17098.5 ORF29514 - 0.00077 19.4 15.4 0.00077 19.4 15.4 4.2 1 1 2 3 3 2 1 WTAP/Mum2p family Herpes_BLRF2 PF05812.12 ORF29514 - 0.0042 17.2 1.8 0.0042 17.2 1.8 4.6 2 2 3 5 5 5 2 Herpesvirus BLRF2 protein Atg14 PF10186.9 ORF29514 - 0.0051 15.9 19.5 0.0051 15.9 19.5 2.5 2 0 0 2 2 2 1 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_CLD_2 PF14197.6 ORF29514 - 0.0095 16.0 40.6 0.016 15.3 7.8 5.6 2 2 2 4 4 4 2 Centrosome localisation domain of PPC89 CEP63 PF17045.5 ORF29514 - 0.013 15.4 11.9 0.013 15.4 11.9 3.2 1 1 2 3 3 3 0 Centrosomal protein of 63 kDa EPSP_synthase PF00275.20 ORF29514 - 0.055 12.2 1.1 0.11 11.2 1.1 1.4 1 0 0 1 1 1 0 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FlaC_arch PF05377.11 ORF29514 - 0.088 13.2 39.5 0.16 12.4 4.3 5.8 4 1 0 5 5 5 0 Flagella accessory protein C (FlaC) Lebercilin PF15619.6 ORF29514 - 0.49 10.0 53.9 0.027 14.1 9.1 3.4 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease HrpB7 PF09486.10 ORF29514 - 0.55 10.6 11.2 2.8 8.3 1.2 3.2 2 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) ATG16 PF08614.11 ORF29514 - 1.7 8.9 50.1 1.2 9.4 28.3 3.4 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) GrpE PF01025.19 ORF29514 - 3.9 7.1 52.4 2.5 7.7 15.5 3.8 1 1 3 4 4 4 0 GrpE Fez1 PF06818.15 ORF29514 - 3.9 7.9 46.4 54 4.2 30.2 2.8 1 1 1 2 2 2 0 Fez1 TPR_MLP1_2 PF07926.12 ORF29514 - 4.6 7.3 56.4 1 9.4 22.4 3.5 2 1 2 4 4 4 0 TPR/MLP1/MLP2-like protein TACC_C PF05010.14 ORF29514 - 6.1 6.6 53.5 0.29 10.9 30.5 2.8 1 1 2 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HOOK PF05622.12 ORF29514 - 8.9 4.3 54.7 0.53 8.4 45.8 2.1 1 1 1 2 2 2 0 HOOK protein PhyH PF05721.13 ORF25909 - 0.00023 21.5 0.1 0.0039 17.5 0.1 2.4 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Asp_Arg_Hydrox PF05118.15 ORF25909 - 0.074 12.9 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase ACCA PF03255.14 ORF11653 - 2.4e-62 209.1 0.1 3.6e-62 208.5 0.1 1.3 1 0 0 1 1 1 1 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Carboxyl_trans PF01039.22 ORF11653 - 7.1e-18 64.5 0.1 8.3e-18 64.3 0.1 1.1 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 ORF11653 - 0.00056 19.5 0.0 0.00085 18.9 0.0 1.2 1 0 0 1 1 1 1 Malonate decarboxylase gamma subunit (MdcE) Med9 PF07544.13 ORF11653 - 0.065 13.3 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 PseudoU_synth_2 PF00849.22 ORF111993 - 8.3e-30 104.0 0.0 1.4e-29 103.3 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 ORF111993 - 6.8e-11 41.7 0.3 1.2e-10 40.9 0.3 1.5 1 0 0 1 1 1 1 S4 domain DUF3603 PF12227.8 ORF111993 - 0.1 11.9 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3603) Peripla_BP_3 PF13377.6 ORF107601 - 6.9e-33 114.3 0.3 1.5e-32 113.2 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF107601 - 2.4e-23 83.0 0.3 3.1e-23 82.6 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF107601 - 1e-15 58.1 0.1 1.4e-15 57.6 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peptidase_C1 PF00112.23 NODE_20947_length_952_cov_1028.513631_g16096_i0forward_frame_1 - 2.9e-52 177.9 11.7 4.5e-52 177.3 11.7 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 NODE_20947_length_952_cov_1028.513631_g16096_i0forward_frame_1 - 7.7e-17 61.5 7.2 1.7e-16 60.4 7.2 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Fez1 PF06818.15 NODE_20924_length_953_cov_225.732026_g16078_i0reverse_frame_1 - 0.00071 20.1 14.6 0.00071 20.1 14.6 2.9 1 1 1 2 2 2 1 Fez1 DUF3552 PF12072.8 NODE_20924_length_953_cov_225.732026_g16078_i0reverse_frame_1 - 0.029 13.8 65.3 0.2 11.0 9.6 4.0 1 1 3 4 4 4 0 Domain of unknown function (DUF3552) PKcGMP_CC PF16808.5 NODE_20924_length_953_cov_225.732026_g16078_i0reverse_frame_1 - 0.2 11.6 0.0 0.2 11.6 0.0 8.4 6 4 2 8 8 8 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Csm1_N PF18504.1 NODE_20924_length_953_cov_225.732026_g16078_i0reverse_frame_1 - 1.9 8.9 46.7 0.52 10.7 1.8 6.5 3 2 3 6 6 6 0 Csm1 N-terminal domain Spc7 PF08317.11 NODE_20924_length_953_cov_225.732026_g16078_i0reverse_frame_1 - 4.6 6.0 54.3 0.021 13.7 7.3 3.1 1 1 3 4 4 4 0 Spc7 kinetochore protein Atg14 PF10186.9 NODE_20924_length_953_cov_225.732026_g16078_i0reverse_frame_1 - 6.4 5.8 53.4 0.71 8.9 12.4 3.3 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 Clat_adaptor_s PF01217.20 NODE_20924_length_953_cov_225.732026_g16078_i0forward_frame_1 - 1.6 8.7 8.2 17 5.4 0.1 3.8 1 1 1 4 4 4 0 Clathrin adaptor complex small chain zf_C2H2_10 PF18414.1 NODE_20906_length_954_cov_90.303591_g16062_i0reverse_frame_1 - 0.64 9.6 6.6 0.66 9.6 0.9 2.5 2 0 0 2 2 2 0 C2H2 type zinc-finger DOG1 PF14144.6 NODE_20827_length_956_cov_88.184582_g15995_i0reverse_frame_3 - 0.033 14.4 0.3 0.089 13.0 0.2 1.8 1 1 1 2 2 2 0 Seed dormancy control Surface_antigen PF11054.8 NODE_20827_length_956_cov_88.184582_g15995_i0reverse_frame_3 - 0.077 12.7 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Sporozoite TA4 surface antigen IBN_N PF03810.19 NODE_20796_length_956_cov_888.016287_g12620_i5reverse_frame_2 - 0.016 15.1 0.2 0.036 14.0 0.2 1.6 1 0 0 1 1 1 0 Importin-beta N-terminal domain IBN_N PF03810.19 NODE_20795_length_956_cov_902.693811_g12620_i4forward_frame_2 - 0.016 15.1 0.2 0.036 14.0 0.2 1.6 1 0 0 1 1 1 0 Importin-beta N-terminal domain APC1_C PF18122.1 NODE_20795_length_956_cov_902.693811_g12620_i4forward_frame_2 - 0.15 12.0 2.6 0.11 12.5 0.7 1.6 2 0 0 2 2 2 0 Anaphase-promoting complex sub unit 1 C-terminal domain zf-RING_11 PF17123.5 NODE_20794_length_956_cov_976.395223_g12620_i3reverse_frame_2 - 0.34 10.7 4.3 0.19 11.5 1.6 2.1 2 0 0 2 2 2 0 RING-like zinc finger IBN_N PF03810.19 NODE_20794_length_956_cov_976.395223_g12620_i3forward_frame_2 - 0.015 15.2 0.2 0.036 14.0 0.2 1.6 1 0 0 1 1 1 0 Importin-beta N-terminal domain N_BRCA1_IG PF16158.5 NODE_20790_length_957_cov_76.911063_g15966_i0forward_frame_3 - 0.00031 21.4 0.0 0.00061 20.5 0.0 1.5 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene DUF2808 PF10989.8 NODE_20790_length_957_cov_76.911063_g15966_i0forward_frame_2 - 0.031 14.2 0.2 0.054 13.5 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2808) zf-H2C2_2 PF13465.6 NODE_20767_length_957_cov_324.893709_g15946_i0reverse_frame_2 - 4.4e-05 23.7 3.6 0.0027 18.1 0.2 3.9 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_20767_length_957_cov_324.893709_g15946_i0reverse_frame_2 - 0.00053 20.6 13.6 0.027 15.3 1.1 3.9 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_20767_length_957_cov_324.893709_g15946_i0reverse_frame_2 - 0.00065 20.0 8.4 0.0036 17.7 0.8 4.1 4 0 0 4 4 4 2 Zinc finger, C2H2 type DUF2652 PF10851.8 NODE_20767_length_957_cov_324.893709_g15946_i0reverse_frame_2 - 0.87 9.7 3.4 1 9.5 0.4 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF2652) AA_kinase PF00696.28 ORF9763 - 4.9e-27 95.1 0.0 6.2e-27 94.7 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family Ank_2 PF12796.7 ORF97557 - 1.1e-20 74.0 0.7 2.5e-06 28.0 0.1 4.2 2 1 3 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF97557 - 7.7e-17 61.4 6.5 1.8e-07 31.6 0.1 5.8 3 2 3 6 6 6 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF97557 - 3.4e-14 52.5 5.3 0.01 16.3 0.0 6.4 5 1 1 6 6 6 3 Ankyrin repeat Ank_3 PF13606.6 ORF97557 - 7.5e-14 50.5 6.3 0.11 13.1 0.0 6.8 6 1 1 7 7 7 5 Ankyrin repeat Ank_5 PF13857.6 ORF97557 - 5.5e-12 45.7 3.5 0.001 19.3 0.1 4.1 4 0 0 4 4 4 3 Ankyrin repeats (many copies) DUF2795 PF11387.8 ORF97557 - 0.031 14.5 1.3 0.78 10.0 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2795) XdhC_C PF13478.6 ORF95589 - 4.1e-20 72.5 0.1 7.3e-20 71.7 0.1 1.4 1 0 0 1 1 1 1 XdhC Rossmann domain XdhC_CoxI PF02625.16 ORF95589 - 2.9e-18 65.8 2.7 5.9e-18 64.8 2.7 1.6 1 0 0 1 1 1 1 XdhC and CoxI family Acetyltransf_6 PF13480.7 ORF95589 - 0.27 11.4 1.3 0.37 10.9 0.1 1.8 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Peptidase_C1 PF00112.23 ORF91401 - 9e-50 169.8 5.4 2.3e-49 168.4 5.4 1.7 1 1 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF91401 - 0.00082 18.3 0.1 0.2 10.4 0.0 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Tmemb_9 PF05434.11 ORF73070 - 0.014 15.3 0.5 0.029 14.2 0.5 1.5 1 0 0 1 1 1 0 TMEM9 DUF4051 PF13260.6 ORF73070 - 0.034 13.9 1.9 0.082 12.7 1.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4051) DUF818 PF05677.12 ORF73070 - 0.045 12.7 0.1 0.082 11.9 0.1 1.4 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) Orf78 PF06024.12 ORF73070 - 0.13 12.6 0.2 0.13 12.6 0.2 2.0 2 0 0 2 2 2 0 Orf78 (ac78) Ac76 PF05814.11 ORF73070 - 0.13 12.3 1.1 0.34 10.9 1.1 1.7 1 0 0 1 1 1 0 Orf76 (Ac76) DUF4834 PF16118.5 ORF73070 - 0.19 12.7 0.6 0.6 11.1 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) DUF3139 PF11337.8 ORF73070 - 2.6 8.7 8.1 10 6.8 8.1 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) DcpS_C PF11969.8 ORF71659 - 0.01 16.3 0.0 0.037 14.5 0.0 1.8 1 1 0 1 1 1 0 Scavenger mRNA decapping enzyme C-term binding MFS_1 PF07690.16 ORF69066 - 1.1e-21 77.2 7.3 1.5e-21 76.7 7.3 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily FAD_binding_5 PF00941.21 ORF68929 - 1.9e-48 164.4 0.0 2.7e-48 163.9 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 ORF68929 - 7e-07 29.4 1.1 1.9e-06 28.0 0.4 2.1 2 0 0 2 2 2 1 CO dehydrogenase flavoprotein C-terminal domain RIFIN PF02009.16 ORF68123 - 2.8 7.7 7.9 4.8 7.0 7.9 1.3 1 0 0 1 1 1 0 Rifin Rib_5-P_isom_A PF06026.14 ORF66345 - 7.7e-66 221.0 0.0 9.9e-66 220.6 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) OB_NTP_bind PF07717.16 ORF65555 - 1.6e-13 50.8 0.0 5.5e-13 49.1 0.0 1.8 2 0 0 2 2 2 1 Oligonucleotide/oligosaccharide-binding (OB)-fold HA2 PF04408.23 ORF65555 - 2.3e-05 24.7 0.0 3.5e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Helicase associated domain (HA2) FUSC PF04632.12 ORF60205 - 0.03 12.9 3.2 0.041 12.4 3.2 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Rib_5-P_isom_A PF06026.14 ORF60134 - 7.7e-66 221.0 0.0 9.9e-66 220.6 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PRP1_N PF06424.12 ORF59065 - 1.8 8.9 6.7 3.5 8.0 5.9 1.8 2 0 0 2 2 2 0 PRP1 splicing factor, N-terminal Whib PF02467.16 ORF58559 - 4.9 7.8 7.1 6.9 7.3 1.0 2.7 1 1 1 2 2 2 0 Transcription factor WhiB Cytochrom_B_C PF00032.17 ORF54359 - 4.4 7.7 9.8 2.4 8.5 4.5 2.6 2 1 1 3 3 3 0 Cytochrome b(C-terminal)/b6/petD PAF-AH_p_II PF03403.13 ORF48536 - 1.4e-27 96.2 0.2 6.8e-26 90.7 0.2 2.5 1 1 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 ORF48536 - 5.7e-06 25.4 0.0 9.3e-06 24.7 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme Hydrolase_4 PF12146.8 ORF48536 - 4.8e-05 22.8 0.2 0.00018 20.8 0.2 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF48536 - 0.0014 19.3 0.0 0.0015 19.2 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF48536 - 0.0076 15.9 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 ORF48536 - 0.011 14.4 0.0 0.019 13.7 0.0 1.3 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Chlorophyllase PF07224.11 ORF48536 - 0.026 13.5 0.0 1.2 8.1 0.0 2.1 2 0 0 2 2 2 0 Chlorophyllase DLH PF01738.18 ORF48536 - 0.051 13.1 0.0 0.12 11.9 0.0 1.5 1 1 0 1 1 1 0 Dienelactone hydrolase family DHHC PF01529.20 ORF46902 - 0.0022 18.1 4.2 0.0033 17.5 4.2 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase LRR_6 PF13516.6 ORF44692 - 3.5e-05 23.5 0.7 0.16 12.1 0.0 3.5 3 0 0 3 3 3 2 Leucine Rich repeat Methyltransf_24 PF13578.6 ORF43742 - 2.3e-11 44.6 0.1 4.2e-11 43.8 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF43742 - 1.8e-09 37.1 0.0 2.2e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase CmcI PF04989.12 ORF43742 - 0.046 13.4 0.0 0.07 12.8 0.0 1.3 1 0 0 1 1 1 0 Cephalosporin hydroxylase Radial_spoke PF04712.12 ORF42092 - 4.3e-54 184.3 1.2 7.4e-34 117.5 0.1 2.0 1 1 1 2 2 2 2 Radial spokehead-like protein DUF3038 PF11237.8 ORF42092 - 0.12 12.4 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) TPR_14 PF13428.6 ORF40373 - 0.0016 19.1 0.3 21 6.2 0.0 4.2 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF40373 - 0.059 13.5 0.2 29 5.1 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF40373 - 0.062 13.2 0.5 21 5.1 0.0 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF40373 - 0.085 13.1 0.3 53 4.4 0.0 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat S1 PF00575.23 ORF37048 - 1.2e-42 144.1 5.6 1.7e-13 50.7 0.2 3.5 4 0 0 4 4 4 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF37048 - 4.4e-09 36.2 2.5 0.0022 17.9 0.0 3.1 3 0 0 3 3 3 2 RNase II-type exonuclease C-terminal S1 domain S1_2 PF13509.6 ORF37048 - 9.4e-06 25.6 0.9 1.1 9.3 0.0 5.1 3 3 0 3 3 3 2 S1 domain CSD PF00313.22 ORF37048 - 0.0014 18.4 2.7 0.81 9.6 0.1 3.4 3 0 0 3 3 3 2 'Cold-shock' DNA-binding domain Agenet PF05641.12 ORF37048 - 0.0041 17.5 0.1 0.18 12.3 0.0 3.2 2 1 1 3 3 3 1 Agenet domain DUF3016 PF11454.8 ORF37048 - 0.051 13.3 0.1 5.2 6.8 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3016) DUF3221 PF11518.8 ORF37048 - 0.2 12.0 5.2 15 6.1 0.0 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF3221) ProQ_C PF17516.2 ORF37048 - 0.49 9.8 2.7 11 5.5 0.2 3.1 3 0 0 3 3 3 0 ProQ C-terminal domain MoeA_C PF03454.15 ORF37048 - 1.5 9.1 3.8 92 3.3 0.2 3.9 3 2 0 3 3 3 0 MoeA C-terminal region (domain IV) MFS_1 PF07690.16 ORF36947 - 3.1e-13 49.4 14.6 4.7e-13 48.8 14.6 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF36947 - 1.5e-08 34.0 12.7 9.4e-07 28.0 12.7 2.3 1 1 0 1 1 1 1 Sugar (and other) transporter Asp PF00026.23 ORF36756 - 1.4e-34 119.9 2.2 1.8e-34 119.6 2.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF36756 - 7.5e-06 26.3 0.4 3e-05 24.3 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal FAM165 PF14981.6 ORF36756 - 0.18 11.6 0.1 0.32 10.8 0.1 1.4 1 0 0 1 1 1 0 FAM165 family Acyltransferase PF01553.21 ORF34915 - 2.7e-17 62.7 0.0 4.5e-17 61.9 0.0 1.3 1 0 0 1 1 1 1 Acyltransferase DUF3311 PF11755.8 ORF34915 - 0.028 14.4 4.4 0.18 11.8 0.6 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3311) Acyltransf_C PF16076.5 ORF34915 - 0.029 14.5 0.0 0.056 13.6 0.0 1.5 1 0 0 1 1 1 0 Acyltransferase C-terminus DUF2207 PF09972.9 ORF34915 - 0.16 10.7 0.0 0.4 9.4 0.0 1.5 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Chloroa_b-bind PF00504.21 ORF30199 - 1.2e-45 156.0 2.1 3.7e-28 99.1 0.3 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein SET PF00856.28 ORF25591 - 5e-07 30.3 0.0 1.4e-06 28.8 0.0 1.7 1 1 0 1 1 1 1 SET domain ANAPC2 PF08672.11 ORF25591 - 0.16 12.5 0.0 0.41 11.2 0.0 1.6 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 Whib PF02467.16 ORF23863 - 4.9 7.8 7.1 6.9 7.3 1.0 2.7 1 1 1 2 2 2 0 Transcription factor WhiB Ank_2 PF12796.7 ORF23417 - 1.8e-19 70.1 0.0 2.2e-15 57.0 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF23417 - 2e-17 63.3 0.0 4.7e-12 46.2 0.0 3.4 3 1 0 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF23417 - 3e-16 59.0 0.7 0.00016 22.0 0.0 3.9 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF23417 - 1.3e-12 46.7 0.0 0.0013 19.0 0.0 4.6 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF23417 - 6.4e-12 45.5 0.1 1.2e-06 28.7 0.0 3.7 2 1 1 3 3 3 2 Ankyrin repeats (many copies) TPR_2 PF07719.17 ORF23417 - 6e-07 29.1 4.3 0.018 15.1 1.2 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF23417 - 2.1e-06 28.2 2.7 6.8e-06 26.5 2.7 2.0 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF23417 - 7.8e-05 23.2 15.5 0.00032 21.3 5.8 3.2 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF23417 - 0.00011 22.2 7.0 0.00022 21.3 7.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF23417 - 0.00024 21.1 2.2 0.1 12.7 0.5 3.0 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TPR_1 PF00515.28 ORF23417 - 0.0054 16.5 1.0 0.03 14.1 0.4 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat PTE PF02126.18 ORF23417 - 0.0096 15.4 0.0 0.08 12.4 0.0 1.9 2 0 0 2 2 2 1 Phosphotriesterase family TPR_14 PF13428.6 ORF23417 - 0.026 15.3 17.4 0.043 14.6 5.3 4.3 3 1 2 5 5 4 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF23417 - 0.027 14.8 1.2 0.087 13.2 1.2 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF23417 - 0.039 14.2 0.5 0.077 13.2 0.5 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 GATase_7 PF13537.6 ORF23417 - 0.16 11.9 0.0 3.1 7.7 0.0 2.6 2 1 0 2 2 2 0 Glutamine amidotransferase domain TPR_12 PF13424.6 ORF23417 - 1.1 9.6 11.8 5.7 7.3 0.2 3.3 2 1 1 3 3 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF23417 - 9.2 6.3 11.5 6.9 6.7 1.5 3.5 4 0 0 4 4 4 0 Tetratricopeptide repeat Tubulin_C PF03953.17 ORF21455 - 8.5e-49 164.9 0.1 1.7e-48 163.9 0.1 1.5 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF21455 - 2.3e-16 60.6 0.1 4.6e-16 59.6 0.1 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain DUF4373 PF14297.6 ORF21209 - 0.069 14.0 0.2 0.13 13.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4373) Rep_fac_C PF08542.11 ORF21209 - 0.17 12.3 0.1 0.62 10.5 0.1 1.9 2 0 0 2 2 2 0 Replication factor C C-terminal domain DEC-1_N PF04625.13 ORF21209 - 1.7 7.6 12.9 2.3 7.1 12.9 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Trypan_PARP PF05887.11 ORF21209 - 2.4 8.1 14.2 3.8 7.5 14.2 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) TMF_TATA_bd PF12325.8 ORF17100 - 0.00029 21.0 44.8 0.00057 20.1 11.9 4.4 1 1 3 4 4 4 2 TATA element modulatory factor 1 TATA binding Fez1 PF06818.15 ORF17100 - 0.00031 21.2 42.2 0.0054 17.2 16.9 3.3 1 1 2 3 3 3 2 Fez1 TMF_DNA_bd PF12329.8 ORF17100 - 0.00058 19.8 9.5 0.00058 19.8 9.5 5.7 3 2 3 6 6 6 1 TATA element modulatory factor 1 DNA binding CENP-F_leu_zip PF10473.9 ORF17100 - 0.0098 15.9 52.7 0.17 11.9 5.4 5.3 1 1 4 5 5 5 3 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fib_alpha PF08702.10 ORF17100 - 0.011 16.0 46.2 0.37 11.0 11.5 3.8 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family CALCOCO1 PF07888.11 ORF17100 - 0.018 13.9 45.5 0.3 9.9 1.6 3.6 1 1 1 3 3 3 0 Calcium binding and coiled-coil domain (CALCOCO1) like CBP_BcsR PF10945.8 ORF17100 - 0.018 14.5 0.0 0.076 12.5 0.0 2.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR Spc7 PF08317.11 ORF17100 - 0.08 11.8 51.2 0.11 11.4 21.0 3.3 1 1 2 3 3 3 0 Spc7 kinetochore protein HJURP_C PF12347.8 ORF17100 - 0.14 12.2 0.5 0.61 10.2 0.3 2.2 1 1 1 2 2 2 0 Holliday junction regulator protein family C-terminal repeat GAS PF13851.6 ORF17100 - 0.18 11.1 53.2 0.2 11.0 16.5 3.2 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF17100 - 0.24 8.9 42.0 0.38 8.2 42.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Atg14 PF10186.9 ORF17100 - 0.34 10.0 34.0 1.9 7.5 16.2 3.0 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 Filament PF00038.21 ORF17100 - 0.35 10.4 49.2 4 6.9 12.0 3.3 1 1 1 2 2 2 0 Intermediate filament protein WEMBL PF05701.11 ORF17100 - 0.54 8.9 41.1 7.7 5.1 41.2 2.1 1 1 0 1 1 1 0 Weak chloroplast movement under blue light ATG16 PF08614.11 ORF17100 - 0.68 10.1 46.9 0.031 14.5 24.8 3.7 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) DUF812 PF05667.11 ORF17100 - 0.93 8.3 50.6 0.81 8.5 11.9 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF812) HIP1_clath_bdg PF16515.5 ORF17100 - 1.4 9.6 50.0 1.2 9.8 10.3 5.1 1 1 4 5 5 5 0 Clathrin-binding domain of Huntingtin-interacting protein 1 FUSC PF04632.12 ORF17100 - 1.6 7.1 4.9 0.68 8.4 1.7 1.8 1 1 1 2 2 2 0 Fusaric acid resistance protein family HMMR_N PF15905.5 ORF17100 - 2.7 7.4 50.5 0.062 12.8 22.2 2.3 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF1664 PF07889.12 ORF17100 - 4.9 7.2 39.5 1.1 9.4 3.8 4.8 1 1 5 6 6 6 0 Protein of unknown function (DUF1664) Arch_flagellin PF01917.16 ORF17100 - 5.1 7.3 10.5 0.46 10.7 5.4 1.8 2 1 0 2 2 2 0 Archaebacterial flagellin MscS_porin PF12795.7 ORF17100 - 5.2 6.5 42.5 5.1 6.6 16.4 3.6 1 1 2 3 3 3 0 Mechanosensitive ion channel porin domain EzrA PF06160.12 ORF17100 - 7 4.7 51.4 3.9 5.5 16.0 2.3 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA DUF2353 PF09789.9 ORF17100 - 9.3 5.5 44.5 0.12 11.7 18.7 2.4 1 1 1 2 2 2 0 Uncharacterized coiled-coil protein (DUF2353) MIF4G PF02854.19 ORF1286 - 0.00034 20.3 0.1 0.0075 15.9 0.1 2.2 2 1 0 2 2 2 1 MIF4G domain CsgE PF10627.9 ORF1286 - 0.19 12.0 0.0 0.33 11.2 0.0 1.4 1 0 0 1 1 1 0 Curli assembly protein CsgE RIFIN PF02009.16 ORF12144 - 4.2 7.2 6.0 6.1 6.6 6.0 1.2 1 0 0 1 1 1 0 Rifin DRAT PF07357.11 ORF1146 - 0.095 11.9 0.1 0.14 11.3 0.1 1.1 1 0 0 1 1 1 0 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) 7tm_7 PF08395.12 ORF108748 - 0.45 9.7 18.2 0.017 14.3 9.5 2.0 1 1 1 2 2 2 0 7tm Chemosensory receptor DUF2206 PF09971.9 ORF108748 - 1.8 7.3 14.7 2.6 6.7 14.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) TFIIA PF03153.13 ORF108748 - 8.7 6.2 10.7 11 5.8 10.7 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit MSP PF01716.18 ORF108483 - 3.3e-80 268.8 0.4 3.9e-80 268.5 0.4 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide Asp PF00026.23 ORF102438 - 4.1e-34 118.4 3.1 5.2e-34 118.1 3.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF102438 - 8.1e-06 26.2 0.4 3.3e-05 24.2 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal FAM165 PF14981.6 ORF102438 - 0.18 11.6 0.1 0.32 10.8 0.1 1.3 1 0 0 1 1 1 0 FAM165 family Rhodanese PF00581.20 NODE_21034_length_950_cov_2.978142_g16166_i0reverse_frame_1 - 1.8e-32 112.0 0.0 2.2e-18 66.7 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain DUF1891 PF09004.10 NODE_20924_length_953_cov_225.732026_g16078_i0forward_frame_2 - 1.7 8.3 5.3 22 4.8 0.7 3.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1891) Ribosomal_S21 PF01165.20 NODE_20909_length_954_cov_68.170838_g16065_i0reverse_frame_3 - 0.069 12.9 4.9 0.19 11.5 4.9 1.8 1 0 0 1 1 1 0 Ribosomal protein S21 Lipase_GDSL_2 PF13472.6 NODE_20906_length_954_cov_90.303591_g16062_i0forward_frame_3 - 0.00059 20.3 0.0 0.0021 18.5 0.0 1.8 1 1 1 2 2 2 1 GDSL-like Lipase/Acylhydrolase family PC-Esterase PF13839.6 NODE_20906_length_954_cov_90.303591_g16062_i0forward_frame_3 - 0.17 11.6 0.0 0.5 10.1 0.0 1.6 2 0 0 2 2 2 0 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Amdo_NSP PF12475.8 NODE_20879_length_954_cov_568.279652_g16036_i0reverse_frame_2 - 0.07 13.2 0.4 0.14 12.2 0.4 1.4 1 0 0 1 1 1 0 Amdovirus non-structural protein TIG PF01833.24 NODE_20879_length_954_cov_568.279652_g16036_i0forward_frame_2 - 0.046 13.8 1.1 8.1 6.6 0.1 3.3 3 1 0 3 3 3 0 IPT/TIG domain BTB PF00651.31 ORF99636 - 0.0019 18.4 0.0 0.0035 17.6 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain CobT PF06213.12 ORF99636 - 0.01 15.2 9.8 0.01 15.2 9.8 2.0 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT DUF2151 PF10221.9 ORF99636 - 1.2 7.6 8.2 2.1 6.9 8.2 1.3 1 0 0 1 1 1 0 Cell cycle and development regulator RR_TM4-6 PF06459.12 ORF99636 - 2.1 8.1 23.5 0.06 13.2 14.4 2.1 2 0 0 2 2 2 0 Ryanodine Receptor TM 4-6 GAGA_bind PF06217.12 ORF99636 - 2.5 8.3 12.8 0.24 11.7 7.8 1.8 2 0 0 2 2 2 0 GAGA binding protein-like family CDC45 PF02724.14 ORF99636 - 2.7 6.2 11.2 4.3 5.5 11.2 1.3 1 0 0 1 1 1 0 CDC45-like protein SRP-alpha_N PF04086.13 ORF99636 - 2.8 7.8 22.8 3.6 7.4 0.6 2.1 2 0 0 2 2 2 0 Signal recognition particle, alpha subunit, N-terminal Raftlin PF15250.6 ORF99636 - 8.1 5.1 12.9 22 3.6 0.0 2.0 2 0 0 2 2 2 0 Raftlin LysR_substrate PF03466.20 ORF9753 - 1.6e-43 148.5 1.3 2.3e-43 148.0 1.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF9753 - 3.4e-16 58.9 2.2 4e-16 58.7 1.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 ORF9753 - 0.091 12.6 0.5 0.2 11.5 0.5 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Ion_trans PF00520.31 ORF94884 - 1.6e-20 73.4 12.5 2.1e-20 73.0 12.5 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF94884 - 0.0051 15.5 11.4 0.013 14.2 0.8 2.2 1 1 1 2 2 2 2 Polycystin cation channel DUF2644 PF10841.8 ORF94884 - 5.7 7.2 8.8 0.85 9.9 0.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2644) PCI PF01399.27 ORF94595 - 1.5e-15 57.6 0.2 3.3e-15 56.5 0.2 1.5 1 0 0 1 1 1 1 PCI domain APH PF01636.23 ORF93928 - 3.3e-17 63.2 0.2 9.6e-17 61.7 0.0 1.7 1 1 1 2 2 2 1 Phosphotransferase enzyme family EcKinase PF02958.20 ORF93928 - 2.8e-14 53.1 0.0 1.2e-13 51.0 0.0 1.8 1 1 0 1 1 1 1 Ecdysteroid kinase DUF1679 PF07914.11 ORF93928 - 2.9e-08 33.0 0.0 5.8e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) Choline_kinase PF01633.20 ORF93928 - 0.0035 16.9 0.0 0.0052 16.4 0.0 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase Pkinase PF00069.25 ORF93928 - 0.028 13.8 0.0 0.048 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein kinase domain Ion_trans PF00520.31 ORF9355 - 1.6e-20 73.4 12.5 2.1e-20 73.0 12.5 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF9355 - 0.0051 15.5 11.4 0.013 14.2 0.8 2.2 1 1 1 2 2 2 2 Polycystin cation channel DUF2644 PF10841.8 ORF9355 - 5.7 7.2 8.8 0.85 9.9 0.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2644) TFIIS_M PF07500.14 ORF93248 - 2.9e-13 50.3 0.1 5.5e-13 49.4 0.1 1.4 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain AF-4 PF05110.13 ORF93248 - 0.0031 15.7 10.1 0.0049 15.1 10.1 1.2 1 0 0 1 1 1 1 AF-4 proto-oncoprotein IMUP PF15761.5 ORF93248 - 0.027 15.2 5.1 0.027 15.2 5.1 2.3 3 0 0 3 3 3 0 Immortalisation up-regulated protein MCC-bdg_PDZ PF10506.9 ORF93248 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF1116 PF06545.11 ORF93248 - 0.13 11.8 0.1 0.2 11.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1116) CBP_BcsR PF10945.8 ORF92534 - 0.11 12.0 0.8 1.6 8.3 0.1 2.8 3 0 0 3 3 3 0 Cellulose biosynthesis protein BcsR LpxI_N PF17930.1 ORF92534 - 0.12 12.3 0.2 0.25 11.3 0.2 1.6 1 1 0 1 1 1 0 LpxI N-terminal domain Suf PF05843.14 ORF92534 - 0.66 9.9 12.2 1.5 8.7 6.7 2.3 1 1 0 2 2 2 0 Suppressor of forked protein (Suf) Herpes_DNAp_acc PF04929.12 ORF92534 - 0.95 8.4 5.8 1.3 7.9 5.8 1.2 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Sulfotransfer_1 PF00685.27 ORF8537 - 0.00025 20.6 0.0 0.00036 20.1 0.0 1.3 1 0 0 1 1 1 1 Sulfotransferase domain CPBP PF02517.16 ORF84145 - 6.7e-09 36.0 9.8 2.2e-08 34.4 7.5 2.3 1 1 1 2 2 2 1 CPBP intramembrane metalloprotease TetR_C_16 PF17920.1 ORF80642 - 0.047 13.9 0.1 0.23 11.7 0.0 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain His_Phos_2 PF00328.22 ORF79974 - 2.6e-07 30.4 3.1 2.5e-06 27.1 3.1 2.2 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Ank_2 PF12796.7 ORF76830 - 2.4e-15 56.9 0.6 1.2e-07 32.3 0.0 3.7 3 1 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF76830 - 3.4e-15 56.2 0.5 0.0083 16.7 0.0 5.5 3 2 3 6 6 6 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF76830 - 6.2e-14 51.7 1.8 0.0093 16.4 0.0 5.6 5 1 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF76830 - 2.7e-12 45.7 0.1 0.095 13.3 0.0 5.9 6 0 0 6 6 6 3 Ankyrin repeat Ank_5 PF13857.6 ORF76830 - 4.2e-06 26.9 1.1 0.25 11.7 0.0 5.0 5 0 0 5 5 5 2 Ankyrin repeats (many copies) PKD_channel PF08016.12 ORF7565 - 5.8e-18 64.8 19.6 4.2e-17 61.9 19.6 2.0 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF7565 - 3.3e-16 59.3 18.6 4.6e-16 58.8 18.6 1.2 1 0 0 1 1 1 1 Ion transport protein Bac_luciferase PF00296.20 ORF72891 - 3.4e-71 240.2 3.4 3.9e-71 240.0 3.4 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase ATP-synt_DE PF00401.20 ORF72891 - 0.51 10.7 5.1 0.32 11.3 1.5 2.3 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HNH_repeat PF18780.1 ORF72891 - 5 7.0 5.3 0.82 9.5 0.4 2.3 2 0 0 2 2 2 0 Homing endonuclease repeat DUF4200 PF13863.6 ORF71050 - 1e-19 71.0 24.7 1e-19 71.0 24.7 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4200) Lectin_N PF03954.14 ORF71050 - 1.8 8.3 17.4 0.2 11.4 2.6 3.4 3 1 1 4 4 4 0 Hepatic lectin, N-terminal domain ParcG PF10274.9 ORF70883 - 4.1e-78 261.7 0.0 5.5e-78 261.3 0.0 1.2 1 0 0 1 1 1 1 Parkin co-regulated protein DCB PF16213.5 ORF70883 - 0.0007 19.3 0.6 0.0024 17.5 0.1 1.9 2 0 0 2 2 2 1 Dimerisation and cyclophilin-binding domain of Mon2 KH_8 PF17903.1 ORF70883 - 1.5 9.0 3.5 1.2 9.3 0.4 2.3 2 1 1 3 3 3 0 Krr1 KH1 domain OST-HTH PF12872.7 ORF68276 - 0.079 12.8 0.3 0.14 11.9 0.3 1.3 1 0 0 1 1 1 0 OST-HTH/LOTUS domain Keratin_2_tail PF16210.5 ORF68276 - 1.7 8.9 36.6 2.4 8.4 36.6 1.2 1 0 0 1 1 1 0 Keratin type II cytoskeletal 1 tail FecR PF04773.13 ORF67247 - 2.6e-16 60.0 0.6 3.9e-16 59.5 0.6 1.3 1 0 0 1 1 1 1 FecR protein DUF4880 PF16220.5 ORF67247 - 5.6e-09 35.7 11.5 5.6e-09 35.7 11.5 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4880) DUF4974 PF16344.5 ORF67247 - 4.5e-05 23.4 0.0 9.2e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4974) DUF2570 PF10828.8 ORF67247 - 0.39 10.6 0.0 0.39 10.6 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2570) Peptidase_C1 PF00112.23 ORF66871 - 1.9e-55 188.3 2.9 2.8e-55 187.8 2.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF66871 - 1e-10 41.9 0.1 1.6e-10 41.3 0.1 1.3 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF66871 - 0.016 14.0 0.2 1.7 7.3 0.0 2.3 2 0 0 2 2 2 0 Peptidase C1-like family TRAM_LAG1_CLN8 PF03798.16 ORF64157 - 3.2e-25 89.1 19.8 3.2e-25 89.1 19.8 2.0 2 0 0 2 2 2 1 TLC domain EBV-NA3 PF05009.12 ORF63937 - 0.19 11.2 0.0 0.3 10.6 0.0 1.2 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) GTP_EFTU PF00009.27 ORF50505 - 1e-38 132.9 1.1 1.1e-38 132.8 0.1 1.5 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF50505 - 2.5e-07 30.8 0.3 4.7e-05 23.4 0.1 2.7 2 1 0 2 2 2 1 50S ribosome-binding GTPase ATPase_2 PF01637.18 ORF50505 - 0.0056 16.6 1.2 0.011 15.6 0.0 1.9 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_29 PF13555.6 ORF50505 - 0.026 14.2 0.0 0.06 13.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF50505 - 0.13 12.5 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF5427 PF10310.9 ORF50505 - 0.2 10.6 12.7 0.26 10.2 12.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5427) DUF4551 PF15087.6 ORF50505 - 0.3 9.9 6.6 0.39 9.5 6.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) Ndc1_Nup PF09531.10 ORF50505 - 0.41 9.3 2.5 0.46 9.1 2.5 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Presenilin PF01080.17 ORF50505 - 0.74 8.5 5.6 0.83 8.3 5.6 1.1 1 0 0 1 1 1 0 Presenilin YL1 PF05764.13 ORF50505 - 0.9 9.6 15.3 1.5 8.8 15.3 1.4 1 0 0 1 1 1 0 YL1 nuclear protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks46.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks46.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks46.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks46.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- WD40 PF00400.32 ORF48318 - 2.2e-06 28.3 0.6 0.011 16.5 0.0 4.7 5 0 0 5 5 5 2 WD domain, G-beta repeat PQQ_3 PF13570.6 ORF48318 - 0.00018 21.9 5.9 0.11 13.0 0.9 3.8 2 1 2 4 4 4 2 PQQ-like domain PQQ_2 PF13360.6 ORF48318 - 0.0013 18.4 1.0 0.007 16.0 0.6 2.2 1 1 1 2 2 2 2 PQQ-like domain Chloroa_b-bind PF00504.21 ORF46708 - 2.2e-29 103.0 0.7 8.4e-29 101.2 0.1 2.0 2 0 0 2 2 2 1 Chlorophyll A-B binding protein IATP PF04568.12 ORF46708 - 2 8.9 5.8 3.8 8.0 5.8 1.5 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP Sulfotransfer_1 PF00685.27 ORF45401 - 0.00025 20.6 0.0 0.00036 20.1 0.0 1.3 1 0 0 1 1 1 1 Sulfotransferase domain APG6_N PF17675.1 ORF41148 - 0.91 10.1 12.6 0.42 11.1 1.8 2.4 2 0 0 2 2 2 0 Apg6 coiled-coil region DUF724 PF05266.14 ORF41148 - 1.7 8.4 6.4 3.8 7.3 1.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF724) TetR_C_16 PF17920.1 ORF4040 - 0.047 13.9 0.1 0.23 11.7 0.0 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PGM_PMM_IV PF00408.20 ORF34532 - 2.1e-10 40.6 0.1 4.7e-10 39.5 0.1 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGM_PMM_III PF02880.16 ORF34532 - 0.029 14.5 0.2 0.052 13.7 0.2 1.5 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XylR_N PF06505.11 ORF34532 - 0.093 12.5 0.0 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 Activator of aromatic catabolism XisH PF08814.10 ORF34532 - 0.21 11.8 0.0 0.42 10.8 0.0 1.5 1 0 0 1 1 1 0 XisH protein RNA_pol_Rpb2_4 PF04566.13 ORF32154 - 0.31 11.4 2.5 2.7 8.4 0.5 2.8 2 1 0 2 2 2 0 RNA polymerase Rpb2, domain 4 TTL PF03133.15 ORF31367 - 4e-19 68.8 0.0 9.5e-09 34.8 0.0 2.1 1 1 0 2 2 2 2 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF31367 - 1.2e-08 34.6 0.0 2e-08 33.8 0.0 1.3 1 1 0 1 1 1 1 YheC/D like ATP-grasp MACPF PF01823.19 ORF30935 - 0.13 12.4 5.5 0.22 11.6 5.5 1.5 1 0 0 1 1 1 0 MAC/Perforin domain Mucin15 PF15672.5 ORF26952 - 0.00031 20.3 5.4 0.00031 20.3 5.4 1.7 2 1 0 2 2 2 1 Cell-membrane associated Mucin15 DUF4690 PF15756.5 ORF26952 - 0.00033 21.2 0.7 0.00067 20.2 0.7 1.5 1 0 0 1 1 1 1 Small Novel Rich in Cartilage CYYR1 PF10873.8 ORF26952 - 2.6 8.5 5.7 0.96 9.9 2.1 2.0 2 1 0 2 2 2 0 Cysteine and tyrosine-rich protein 1 ZapB PF06005.12 ORF25031 - 0.01 16.2 2.7 0.01 16.2 2.7 1.5 2 0 0 2 2 2 0 Cell division protein ZapB TMF_TATA_bd PF12325.8 ORF25031 - 0.063 13.5 7.5 0.13 12.5 7.5 1.4 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding IFP_35_N PF07334.13 ORF25031 - 0.12 12.5 0.5 1.7 8.7 0.2 2.3 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus YabA PF06156.13 ORF25031 - 0.13 12.9 0.7 0.13 12.9 0.7 2.1 1 1 1 2 2 2 0 Initiation control protein YabA Cep57_CLD PF14073.6 ORF25031 - 0.15 12.1 4.5 0.21 11.6 4.5 1.1 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 UPF0242 PF06785.11 ORF25031 - 0.41 10.7 3.2 0.7 10.0 3.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus KASH_CCD PF14662.6 ORF25031 - 0.55 10.0 8.9 1.7 8.4 8.9 1.6 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH HAP1_N PF04849.13 ORF25031 - 1.6 7.9 7.9 0.27 10.4 2.3 1.9 1 1 0 1 1 1 0 HAP1 N-terminal conserved region bZIP_2 PF07716.15 ORF25031 - 4.2 7.5 6.8 0.23 11.6 0.7 2.0 2 0 0 2 2 2 0 Basic region leucine zipper TSC22 PF01166.18 ORF25031 - 5.9 7.3 8.2 2 8.8 2.4 2.5 2 1 1 3 3 3 0 TSC-22/dip/bun family EF-hand_5 PF13202.6 ORF24513 - 8e-08 31.4 0.0 2.1e-07 30.1 0.0 1.8 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF24513 - 1.6e-05 24.1 1.2 3.4e-05 23.1 0.0 2.3 3 0 0 3 3 3 1 EF hand EF-hand_7 PF13499.6 ORF24513 - 0.00013 22.3 4.0 0.022 15.2 1.3 1.9 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF24513 - 0.00029 20.5 0.0 0.0013 18.5 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 ORF24513 - 0.014 15.2 0.0 0.029 14.2 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain pair Ion_trans PF00520.31 ORF24513 - 0.031 13.5 1.6 0.04 13.2 1.6 1.1 1 0 0 1 1 1 0 Ion transport protein SPARC_Ca_bdg PF10591.9 ORF24513 - 0.035 14.4 0.5 0.75 10.1 0.0 2.3 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region OAD_gamma PF04277.13 ORF24513 - 0.078 13.6 0.0 0.22 12.1 0.0 1.7 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Epimerase PF01370.21 ORF22094 - 1.4e-57 195.0 0.0 1.9e-57 194.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF22094 - 1.6e-20 73.8 1.5 3e-20 72.9 0.0 1.8 1 1 1 2 2 2 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 ORF22094 - 5.1e-08 32.3 0.0 7.4e-06 25.3 0.0 2.1 2 0 0 2 2 2 2 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 ORF22094 - 7.5e-07 28.6 0.8 0.00037 19.7 0.0 3.0 2 1 1 3 3 3 2 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 ORF22094 - 7.4e-05 21.9 0.8 0.00035 19.7 0.8 1.9 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 ORF22094 - 0.07 12.3 0.8 0.95 8.6 0.0 2.2 1 1 1 2 2 2 0 Male sterility protein DUF4200 PF13863.6 ORF21225 - 1e-19 71.0 24.7 1e-19 71.0 24.7 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4200) Lectin_N PF03954.14 ORF21225 - 1.8 8.3 17.4 0.2 11.4 2.6 3.4 3 1 1 4 4 4 0 Hepatic lectin, N-terminal domain DUF4200 PF13863.6 ORF20375 - 1e-19 71.0 24.7 1e-19 71.0 24.7 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4200) Lectin_N PF03954.14 ORF20375 - 1.8 8.3 17.4 0.2 11.4 2.6 3.4 3 1 1 4 4 4 0 Hepatic lectin, N-terminal domain Alanine_zipper PF11839.8 ORF17463 - 0.014 15.8 44.2 0.17 12.2 22.8 2.9 1 1 2 3 3 3 0 Alanine-zipper, major outer membrane lipoprotein ACI44 PF15270.6 ORF17463 - 0.021 15.0 0.1 0.044 14.0 0.1 1.4 1 0 0 1 1 1 0 Metallo-carboxypeptidase inhibitor HisKA_3 PF07730.13 ORF17463 - 0.66 10.5 20.2 3.6 8.2 4.4 3.6 1 1 2 3 3 3 0 Histidine kinase T3SSipB PF16535.5 ORF17463 - 0.67 10.4 21.0 1.8 9.0 21.0 1.7 1 1 0 1 1 1 0 Type III cell invasion protein SipB DUF3584 PF12128.8 ORF17463 - 0.88 7.0 14.3 1.4 6.4 14.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF4051 PF13260.6 ORF17463 - 1.3 8.8 4.6 0.82 9.5 1.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) SET PF00856.28 ORF16312 - 1.9e-07 31.6 0.2 2.1e-06 28.2 0.2 2.2 1 1 0 1 1 1 1 SET domain Aa_trans PF01490.18 ORF11302 - 6.2e-21 74.6 12.6 7.6e-21 74.3 12.6 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Bap31 PF05529.12 ORF11302 - 2 8.2 5.0 0.57 10.0 1.5 1.8 2 0 0 2 2 2 0 Bap31/Bap29 transmembrane region DUF4577 PF15145.6 ORF101759 - 0.064 13.3 0.1 0.064 13.3 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4577) UL45 PF05473.12 ORF101759 - 0.069 12.8 0.0 7.3 6.2 0.1 2.3 2 0 0 2 2 2 0 UL45 protein, carbohydrate-binding C-type lectin-like Herpes_LMP1 PF05297.11 ORF101759 - 0.29 10.3 11.6 0.073 12.3 6.9 2.1 2 0 0 2 2 2 0 Herpesvirus latent membrane protein 1 (LMP1) DUF872 PF05915.12 ORF101759 - 0.35 11.0 5.1 1.5 9.0 0.2 2.8 2 1 1 3 3 3 0 Eukaryotic protein of unknown function (DUF872) Adipogenin PF15202.6 ORF101759 - 0.8 9.8 0.0 0.8 9.8 0.0 3.6 4 1 0 4 4 4 0 Adipogenin DUF3328 PF11807.8 ORF101759 - 3.3 7.4 5.4 1.9 8.2 0.2 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF3328) DUF2207 PF09972.9 ORF101759 - 5.6 5.6 14.8 1 8.1 0.0 2.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF5480 PF17576.2 NODE_21101_length_948_cov_100.391019_g16227_i0forward_frame_1 - 1.9 8.5 6.8 23 5.0 0.1 3.2 2 1 0 2 2 2 0 Family of unknown function (DUF5480) zf-C2H2 PF00096.26 NODE_21072_length_948_cov_3535.047097_g16201_i0reverse_frame_1 - 7.8e-08 32.4 13.0 0.0014 19.0 0.9 4.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_21072_length_948_cov_3535.047097_g16201_i0reverse_frame_1 - 0.00042 20.9 10.7 0.008 16.9 0.7 3.8 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_21072_length_948_cov_3535.047097_g16201_i0reverse_frame_1 - 0.055 13.9 0.1 0.055 13.9 0.1 3.7 3 0 0 3 3 3 0 Zinc-finger double domain zf-C2H2_8 PF15909.5 NODE_21072_length_948_cov_3535.047097_g16201_i0reverse_frame_1 - 0.76 10.1 6.0 2.7 8.4 2.5 2.4 1 1 1 2 2 2 0 C2H2-type zinc ribbon P_proprotein PF01483.20 NODE_21002_length_951_cov_36.718341_g16141_i0forward_frame_2 - 0.15 12.1 0.0 0.66 10.0 0.0 2.0 2 0 0 2 2 2 0 Proprotein convertase P-domain DUF724 PF05266.14 ORF82306 - 3.1e-05 23.9 19.0 0.0033 17.3 1.7 2.8 1 1 0 2 2 2 2 Protein of unknown function (DUF724) MscS_porin PF12795.7 ORF82306 - 3.2e-05 23.6 5.2 3.2e-05 23.6 5.2 2.2 1 1 2 3 3 3 1 Mechanosensitive ion channel porin domain ATG16 PF08614.11 ORF82306 - 3.3e-05 24.2 18.4 0.0032 17.7 7.3 2.4 1 1 1 2 2 2 2 Autophagy protein 16 (ATG16) DUF812 PF05667.11 ORF82306 - 0.00035 19.6 20.4 0.0016 17.4 5.6 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF812) BRE1 PF08647.11 ORF82306 - 0.0011 18.9 22.7 0.12 12.4 0.1 4.1 2 1 2 4 4 4 2 BRE1 E3 ubiquitin ligase HAP1_N PF04849.13 ORF82306 - 0.0015 17.8 19.1 0.018 14.3 1.6 3.6 1 1 2 3 3 3 1 HAP1 N-terminal conserved region Filament PF00038.21 ORF82306 - 0.0019 17.9 24.3 0.034 13.7 4.4 2.6 1 1 1 2 2 2 2 Intermediate filament protein Laminin_I PF06008.14 ORF82306 - 0.0031 17.2 4.2 0.0031 17.2 4.2 2.7 1 1 1 2 2 2 1 Laminin Domain I Fez1 PF06818.15 ORF82306 - 0.0039 17.7 17.9 0.013 16.0 9.9 2.6 1 1 1 2 2 2 1 Fez1 GAS PF13851.6 ORF82306 - 0.0082 15.5 3.7 0.0082 15.5 3.7 2.8 1 1 2 3 3 3 1 Growth-arrest specific micro-tubule binding AAA_13 PF13166.6 ORF82306 - 0.011 14.5 19.8 0.14 10.7 19.7 2.0 1 1 0 1 1 1 0 AAA domain DUF1664 PF07889.12 ORF82306 - 0.012 15.7 17.3 0.1 12.6 0.9 3.9 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) DUF641 PF04859.12 ORF82306 - 0.02 15.2 16.0 0.64 10.4 3.4 3.4 2 2 1 3 3 3 0 Plant protein of unknown function (DUF641) CENP-F_leu_zip PF10473.9 ORF82306 - 0.022 14.8 23.1 1.1 9.3 0.5 3.5 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BicD PF09730.9 ORF82306 - 0.022 13.2 17.9 0.042 12.3 15.5 2.0 1 1 1 2 2 2 0 Microtubule-associated protein Bicaudal-D Spc7 PF08317.11 ORF82306 - 0.025 13.5 24.2 0.058 12.3 8.6 2.6 1 1 1 2 2 2 0 Spc7 kinetochore protein CALCOCO1 PF07888.11 ORF82306 - 0.03 13.2 21.5 0.077 11.9 14.0 2.3 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like DUF4763 PF15960.5 ORF82306 - 0.038 13.3 6.9 0.23 10.7 0.2 3.3 2 2 0 3 3 3 0 Domain of unknown function (DUF4763) DUF4407 PF14362.6 ORF82306 - 0.046 13.1 18.3 2.3 7.5 7.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF4686 PF15742.5 ORF82306 - 0.052 12.7 23.2 0.018 14.2 5.5 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4686) MIP-T3_C PF17749.1 ORF82306 - 0.057 13.4 19.3 0.9 9.5 0.9 3.5 1 1 2 3 3 3 0 Microtubule-binding protein MIP-T3 C-terminal region ADIP PF11559.8 ORF82306 - 0.059 13.5 20.5 1.9 8.5 4.6 3.8 1 1 3 4 4 4 0 Afadin- and alpha -actinin-Binding EzrA PF06160.12 ORF82306 - 0.096 10.8 24.0 0.067 11.3 4.6 2.5 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA TMPIT PF07851.13 ORF82306 - 0.14 11.3 13.6 0.74 9.0 3.6 2.3 2 0 0 2 2 2 0 TMPIT-like protein FPP PF05911.11 ORF82306 - 0.15 10.2 17.1 0.047 11.9 2.9 2.1 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil TPR_MLP1_2 PF07926.12 ORF82306 - 0.16 12.1 16.8 0.092 12.8 3.7 3.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Rab5-bind PF09311.11 ORF82306 - 0.17 11.2 18.4 0.39 10.1 5.2 2.6 1 1 0 2 2 2 0 Rabaptin-like protein DUF5082 PF16888.5 ORF82306 - 0.18 12.1 25.3 1.2 9.5 12.1 3.8 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) Lebercilin PF15619.6 ORF82306 - 0.23 11.1 19.6 0.018 14.7 5.6 2.8 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Atg14 PF10186.9 ORF82306 - 0.24 10.5 22.3 0.77 8.8 2.0 3.2 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 NPV_P10 PF05531.12 ORF82306 - 0.25 11.8 12.6 1 9.9 2.0 4.2 1 1 4 5 5 5 0 Nucleopolyhedrovirus P10 protein DUF4472 PF14739.6 ORF82306 - 0.28 12.0 17.2 0.98 10.2 4.2 3.6 1 1 3 4 4 4 0 Domain of unknown function (DUF4472) KxDL PF10241.9 ORF82306 - 0.3 11.4 0.2 0.3 11.4 0.2 3.6 2 2 1 3 3 3 0 Uncharacterized conserved protein Fib_alpha PF08702.10 ORF82306 - 0.44 10.7 20.8 0.097 12.9 2.9 3.6 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family Laminin_II PF06009.12 ORF82306 - 0.66 10.0 16.3 0.18 11.8 1.6 3.3 1 1 2 3 3 3 0 Laminin Domain II YabA PF06156.13 ORF82306 - 0.71 10.5 13.8 5.9 7.6 1.7 3.9 1 1 1 3 3 3 0 Initiation control protein YabA YscO PF07321.12 ORF82306 - 0.73 9.8 19.1 0.36 10.8 2.1 2.8 1 1 2 3 3 3 0 Type III secretion protein YscO DUF4200 PF13863.6 ORF82306 - 0.76 10.2 27.0 4.7 7.6 5.9 3.8 2 2 0 2 2 2 0 Domain of unknown function (DUF4200) CENP-H PF05837.12 ORF82306 - 0.86 10.0 16.1 0.34 11.3 1.7 3.1 1 1 2 3 3 3 0 Centromere protein H (CENP-H) DivIC PF04977.15 ORF82306 - 1.1 9.1 26.5 1.5 8.6 0.1 5.7 2 2 4 6 6 6 0 Septum formation initiator FlaC_arch PF05377.11 ORF82306 - 1.5 9.2 16.0 2 8.9 0.7 5.2 3 2 2 5 5 5 0 Flagella accessory protein C (FlaC) SlyX PF04102.12 ORF82306 - 1.6 9.4 22.3 15 6.3 0.3 5.6 2 2 2 4 4 4 0 SlyX LMBR1 PF04791.16 ORF82306 - 2.3 7.0 9.2 3.2 6.6 9.2 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein HIP1_clath_bdg PF16515.5 ORF82306 - 2.5 8.7 17.7 1.1 10.0 1.5 3.6 2 2 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 APG6_N PF17675.1 ORF82306 - 2.6 8.6 23.2 1.8e+04 -5.5 23.2 2.9 1 1 0 1 1 0 0 Apg6 coiled-coil region Tropomyosin PF00261.20 ORF82306 - 3.3 7.0 24.7 7.3 5.9 24.7 1.8 1 1 0 1 1 1 0 Tropomyosin DUF745 PF05335.13 ORF82306 - 3.8 7.2 9.2 12 5.5 0.4 2.9 1 1 1 3 3 3 0 Protein of unknown function (DUF745) DUF4140 PF13600.6 ORF82306 - 3.9 8.0 17.6 34 4.9 3.5 4.9 1 1 3 4 4 4 0 N-terminal domain of unknown function (DUF4140) BST2 PF16716.5 ORF82306 - 4 8.1 13.8 1.9 9.1 1.7 3.4 1 1 3 4 4 4 0 Bone marrow stromal antigen 2 FAM76 PF16046.5 ORF82306 - 4.3 6.6 17.3 5.8 6.2 8.7 2.8 1 1 1 2 2 2 0 FAM76 protein DUF3573 PF12097.8 ORF82306 - 4.7 5.9 7.2 12 4.6 0.4 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3573) DUF2968 PF11180.8 ORF82306 - 6.1 6.4 16.6 5.6 6.6 1.6 3.8 1 1 2 4 4 4 0 Protein of unknown function (DUF2968) ZapB PF06005.12 ORF82306 - 6.4 7.3 19.4 0.63 10.5 3.5 4.0 2 1 1 3 3 2 0 Cell division protein ZapB ISG65-75 PF11727.8 ORF82306 - 8.6 5.5 12.6 0.14 11.4 2.6 2.2 2 0 0 2 2 2 0 Invariant surface glycoprotein Ank_2 PF12796.7 ORF81017 - 1.5e-33 115.2 3.6 2.5e-13 50.4 0.1 4.2 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF81017 - 4e-31 107.0 4.4 3.6e-09 37.0 0.0 5.9 4 2 2 6 6 6 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF81017 - 4e-23 79.0 2.7 0.00032 20.9 0.0 8.0 8 0 0 8 8 8 4 Ankyrin repeat Ank PF00023.30 ORF81017 - 5.5e-21 74.0 11.0 8.8e-05 22.8 0.0 7.4 6 1 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF81017 - 4.2e-15 55.6 8.0 7.1e-05 23.0 0.0 5.8 3 2 4 7 7 7 4 Ankyrin repeats (many copies) DUF1843 PF08898.10 ORF81017 - 0.018 15.5 1.9 6 7.4 0.0 4.4 4 0 0 4 4 4 0 Domain of unknown function (DUF1843) DUF4203 PF13886.6 ORF8083 - 3.4e-08 33.4 23.7 3.4e-08 33.4 23.7 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4203) Presenilin PF01080.17 ORF8083 - 0.99 8.1 8.7 1.8 7.2 8.7 1.4 1 0 0 1 1 1 0 Presenilin DUF3040 PF11239.8 ORF8083 - 9.5 6.6 12.6 0.65 10.3 3.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DHHC PF01529.20 ORF79708 - 9.4e-30 103.5 4.7 2e-29 102.4 4.7 1.5 1 0 0 1 1 1 1 DHHC palmitoyltransferase nsp8 PF08717.10 ORF79708 - 0.24 11.2 0.0 0.35 10.7 0.0 1.1 1 0 0 1 1 1 0 nsp8 replicase AA_kinase PF00696.28 ORF77610 - 1.1e-25 90.7 0.4 2.3e-25 89.6 0.4 1.5 1 1 0 1 1 1 1 Amino acid kinase family Pkinase PF00069.25 ORF72824 - 7.6e-61 205.8 0.4 9.2e-61 205.5 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF72824 - 2.2e-29 102.5 0.1 3.2e-29 102.0 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF72824 - 8e-07 28.7 0.0 1.8e-05 24.2 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF72824 - 0.00029 20.3 0.0 0.00044 19.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF72824 - 0.00033 20.4 0.1 0.035 13.7 0.0 2.2 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF72824 - 0.0034 16.2 0.2 0.1 11.4 0.0 2.1 2 0 0 2 2 2 1 Fungal protein kinase Phi29_Phage_SSB PF17427.2 ORF72824 - 0.083 13.1 0.2 0.14 12.3 0.2 1.3 1 0 0 1 1 1 0 Phage Single-stranded DNA-binding protein APH PF01636.23 ORF72824 - 0.19 11.6 0.0 1.1 9.1 0.0 1.9 1 1 0 2 2 2 0 Phosphotransferase enzyme family ER_lumen_recept PF00810.18 ORF72427 - 1.8e-33 116.5 10.3 3.3e-33 115.6 10.3 1.4 1 0 0 1 1 1 1 ER lumen protein retaining receptor Cytochrom_B561 PF03188.16 ORF72427 - 0.035 14.3 0.5 0.087 13.0 0.0 1.9 3 0 0 3 3 3 0 Eukaryotic cytochrome b561 Pho88 PF10032.9 ORF72427 - 0.06 12.6 3.4 0.031 13.5 1.3 1.5 2 0 0 2 2 2 0 Phosphate transport (Pho88) Peptidase_M3 PF01432.20 ORF71630 - 4e-53 181.3 0.0 5e-53 181.0 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M3 TPR_1 PF00515.28 ORF70499 - 2.4e-05 24.0 0.2 6.2e-05 22.6 0.2 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF70499 - 5.1e-05 23.3 0.4 0.0031 17.5 0.1 2.4 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat TPR_14 PF13428.6 ORF70499 - 0.00032 21.3 2.7 0.028 15.2 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF70499 - 0.00052 19.9 0.3 0.0037 17.3 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF70499 - 0.0027 17.8 0.1 0.0066 16.6 0.1 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF70499 - 0.0082 15.8 0.0 0.016 14.9 0.0 1.5 1 0 0 1 1 1 1 TPR repeat TPR_19 PF14559.6 ORF70499 - 0.012 16.1 4.4 0.05 14.1 0.4 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF70499 - 0.061 14.0 2.0 0.33 11.6 0.0 3.1 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF70499 - 0.2 12.1 0.7 17 6.1 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat EF-hand_1 PF00036.32 ORF66852 - 6.2e-16 56.7 9.2 4.5e-06 25.8 1.1 4.9 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF66852 - 7e-15 53.6 9.6 0.0003 20.5 0.7 5.1 3 2 1 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF66852 - 4.8e-14 52.6 9.9 4.3e-11 43.1 2.7 3.9 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF66852 - 3.3e-09 36.5 8.2 0.00036 20.3 0.1 4.2 3 2 2 5 5 5 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF66852 - 2.5e-08 33.1 2.2 0.00016 21.0 0.0 3.2 3 0 0 3 3 3 2 EF hand EF-hand_4 PF12763.7 ORF66852 - 0.0028 17.6 10.6 0.085 12.8 0.8 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF66852 - 0.0048 17.2 0.6 14 6.1 0.0 3.5 3 1 0 3 3 3 2 EF-hand domain adh_short PF00106.25 ORF64980 - 1.7e-28 99.4 0.0 2.5e-28 98.9 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF64980 - 7.6e-27 94.4 0.0 1.3e-26 93.7 0.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF64980 - 0.0011 18.9 0.1 0.0016 18.4 0.1 1.2 1 0 0 1 1 1 1 KR domain CSD PF00313.22 ORF60902 - 3.7e-14 52.3 0.0 5.9e-14 51.7 0.0 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF60902 - 0.00048 19.8 0.1 0.0008 19.0 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF179 PF02622.15 ORF60311 - 3.9e-19 69.2 0.0 8.2e-19 68.1 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 Antimicrobial12 PF08107.11 ORF60311 - 0.054 13.2 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 Pleurocidin family W2 PF02020.18 ORF54366 - 4e-12 46.1 3.5 4e-12 46.1 3.5 2.7 3 1 0 3 3 3 1 eIF4-gamma/eIF5/eIF2-epsilon Coilin_N PF15862.5 ORF54366 - 0.0081 16.0 4.4 0.0081 16.0 4.4 2.7 2 1 0 2 2 2 1 Coilin N-terminus RRM_1 PF00076.22 ORF52815 - 2.9e-17 62.3 0.0 6.8e-11 41.8 0.0 2.5 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Flagellar_put PF12611.8 ORF52815 - 0.058 13.2 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Putative flagellar RICTOR_M PF14666.6 ORF52666 - 3.2e-05 23.7 0.2 0.00016 21.4 0.1 2.3 2 0 0 2 2 2 1 Rapamycin-insensitive companion of mTOR, middle domain DUF2475 PF10629.9 ORF50167 - 7.2e-09 35.7 5.7 0.0013 18.9 0.1 3.3 3 0 0 3 3 3 2 Protein of unknown function (DUF2475) DUF4115 PF13464.6 ORF50167 - 0.015 15.5 0.3 0.03 14.5 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4115) DUF4612 PF15389.6 ORF50167 - 1.8 9.6 6.3 1.2 10.3 3.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4612) Aa_trans PF01490.18 ORF48563 - 2e-13 49.9 9.4 3.6e-13 49.0 9.4 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein ETRAMP PF09716.10 ORF48563 - 0.0091 16.0 0.2 0.04 14.0 0.0 2.2 2 0 0 2 2 2 1 Malarial early transcribed membrane protein (ETRAMP) EF-hand_7 PF13499.6 ORF47802 - 1.4e-14 54.3 4.9 9.7e-12 45.2 0.4 1.9 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF47802 - 4e-13 47.9 2.4 7.2e-06 25.2 0.2 3.2 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF47802 - 1.2e-09 37.3 0.7 0.0011 18.8 0.1 3.6 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF47802 - 4e-07 29.8 2.1 0.0075 16.1 0.2 3.0 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF47802 - 1.3e-06 27.6 0.5 0.026 14.0 0.1 2.7 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF47802 - 0.00087 19.6 2.9 0.0049 17.2 1.0 2.4 2 1 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF47802 - 0.0014 18.5 0.4 0.03 14.3 0.0 2.3 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_11 PF08976.11 ORF47802 - 0.12 13.3 0.0 0.23 12.3 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain Ion_trans PF00520.31 ORF46943 - 0.00012 21.4 5.1 0.00012 21.4 5.1 2.6 2 2 0 2 2 2 1 Ion transport protein DUF2976 PF11190.8 ORF46943 - 0.22 11.3 3.5 0.23 11.3 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2976) ECH_1 PF00378.20 ORF44552 - 2.2e-36 125.5 0.3 1.3e-23 83.6 0.2 2.0 2 0 0 2 2 2 2 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF44552 - 1.1e-24 87.5 0.2 2.7e-24 86.3 0.2 1.6 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF2434 PF10361.9 ORF43116 - 0.00058 18.9 1.5 0.00062 18.8 0.2 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2434) Comm PF15957.5 ORF43116 - 0.012 15.9 1.2 2.2 8.7 0.1 2.5 2 0 0 2 2 2 0 Commissureless DctQ PF04290.12 ORF43116 - 0.049 13.6 0.4 1.2 9.1 0.1 2.2 2 0 0 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF1365 PF07103.11 ORF42059 - 4.9e-35 121.3 0.0 1.5e-33 116.5 0.0 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1365) GFO_IDH_MocA PF01408.22 ORF41254 - 2.4e-14 54.2 0.0 3.8e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 ORF41254 - 2.2e-07 30.9 0.0 4.2e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain LAL_C2 PF18603.1 ORF41254 - 0.043 14.0 0.0 0.13 12.4 0.0 1.8 1 0 0 1 1 1 0 L-amino acid ligase C-terminal domain 2 DnaJ_C PF01556.18 ORF40475 - 2.6e-24 86.0 0.1 3.9e-24 85.4 0.1 1.3 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 ORF40475 - 1.2e-20 73.4 0.4 2.1e-20 72.6 0.4 1.4 1 0 0 1 1 1 1 DnaJ domain TAL_FSA PF00923.19 ORF32825 - 6.9e-102 340.6 0.0 7.9e-102 340.5 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase DUF4203 PF13886.6 ORF29372 - 3.4e-08 33.4 23.7 3.4e-08 33.4 23.7 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4203) Presenilin PF01080.17 ORF29372 - 0.99 8.1 8.7 1.8 7.2 8.7 1.4 1 0 0 1 1 1 0 Presenilin DUF3040 PF11239.8 ORF29372 - 9.5 6.6 12.6 0.65 10.3 3.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) RICTOR_M PF14666.6 ORF28428 - 3.2e-05 23.7 0.2 0.00016 21.4 0.1 2.3 2 0 0 2 2 2 1 Rapamycin-insensitive companion of mTOR, middle domain DUF2838 PF10998.8 ORF24029 - 4.5e-21 75.2 5.8 4.5e-21 75.2 5.8 2.7 3 1 0 3 3 3 1 Protein of unknown function (DUF2838) WD40 PF00400.32 ORF20734 - 7e-12 45.7 11.6 2.1e-05 25.2 0.4 4.4 4 0 0 4 4 4 3 WD domain, G-beta repeat DUF2024 PF09630.10 ORF20734 - 0.1 12.5 1.3 0.73 9.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF2024) DUF4370 PF14290.6 ORF19703 - 0.015 15.1 1.7 0.049 13.5 0.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4370) RIIa PF02197.17 ORF19703 - 0.024 14.3 0.0 0.064 12.9 0.0 1.8 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit Selenoprotein_S PF06936.11 ORF19703 - 0.032 14.1 6.0 0.053 13.3 6.0 1.4 1 0 0 1 1 1 0 Selenoprotein S (SelS) DUF4611 PF15387.6 ORF19703 - 0.34 11.2 9.8 2.9 8.2 9.8 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4611) KfrA_N PF11740.8 ORF19079 - 0.011 16.4 7.4 0.019 15.7 0.2 3.2 3 0 0 3 3 3 0 Plasmid replication region DNA-binding N-term Lzipper-MIP1 PF14389.6 ORF19079 - 0.019 15.3 1.6 4.8 7.6 0.2 2.6 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 DivIC PF04977.15 ORF19079 - 0.51 10.1 4.7 0.42 10.4 1.0 2.4 2 0 0 2 2 2 0 Septum formation initiator zf-C3HC4_3 PF13920.6 ORF16823 - 6.3e-13 48.4 6.8 1e-12 47.7 6.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Yop-YscD_cpl PF16697.5 ORF16823 - 1.3e-06 28.7 0.0 4.1e-06 27.0 0.0 1.8 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FHA PF00498.26 ORF16823 - 1.3e-06 28.7 0.0 2.2e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 FHA domain Prok-RING_4 PF14447.6 ORF16823 - 1.2e-05 25.1 5.7 2.1e-05 24.3 5.7 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF16823 - 0.00053 20.3 7.8 0.0011 19.3 7.8 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF16823 - 0.0063 16.4 6.6 0.012 15.6 6.6 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF16823 - 0.029 14.2 9.1 0.053 13.4 9.1 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF16823 - 0.36 10.9 6.5 0.19 11.7 1.7 2.4 2 0 0 2 2 2 0 RING-type zinc-finger DUF4203 PF13886.6 ORF109653 - 3.4e-08 33.4 23.7 3.4e-08 33.4 23.7 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4203) Presenilin PF01080.17 ORF109653 - 0.99 8.1 8.7 1.8 7.2 8.7 1.4 1 0 0 1 1 1 0 Presenilin DUF3040 PF11239.8 ORF109653 - 9.5 6.6 12.6 0.65 10.3 3.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) Glyco_hydro_30 PF02055.16 ORF107316 - 9.4e-48 163.0 0.1 1.2e-47 162.6 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 TIM-barrel domain Glyco_hydro_30C PF17189.4 ORF107316 - 1.9e-10 40.8 0.0 2.8e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 beta sandwich domain DUF4038 PF13204.6 ORF107316 - 0.0019 17.9 0.1 0.0027 17.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4038) DUF2434 PF10361.9 ORF105711 - 0.00058 18.9 1.5 0.00062 18.8 0.2 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2434) Comm PF15957.5 ORF105711 - 0.012 15.9 1.2 2.2 8.7 0.1 2.5 2 0 0 2 2 2 0 Commissureless DctQ PF04290.12 ORF105711 - 0.049 13.6 0.4 1.2 9.1 0.1 2.2 2 0 0 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component RhlB PF12300.8 NODE_21293_length_943_cov_3.175110_g16379_i0forward_frame_1 - 5.4 7.1 9.3 8.4 6.5 9.3 1.2 1 0 0 1 1 1 0 ATP-dependent RNA helicase RhlB CENP-F_N PF10481.9 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.0032 17.2 6.4 0.0032 17.2 6.4 1.4 1 1 0 1 1 1 1 Cenp-F N-terminal domain Bcr-Abl_Oligo PF09036.10 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.012 15.6 0.7 0.025 14.6 0.7 1.5 1 0 0 1 1 1 0 Bcr-Abl oncoprotein oligomerisation domain FlaC_arch PF05377.11 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.013 15.9 3.3 0.015 15.7 1.3 2.2 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Mto2_bdg PF12808.7 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.036 14.4 0.9 0.1 12.9 0.9 1.7 1 0 0 1 1 1 0 Micro-tubular organiser Mto1 C-term Mto2-binding region DivIC PF04977.15 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.037 13.8 1.1 0.098 12.4 1.1 1.7 1 0 0 1 1 1 0 Septum formation initiator DUF4349 PF14257.6 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.1 12.0 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) KH_10 PF17905.1 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.11 12.9 1.6 0.29 11.6 1.6 1.6 1 0 0 1 1 1 0 GLD-3 KH domain 5 TPR_MLP1_2 PF07926.12 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.17 11.9 5.0 0.08 13.0 2.1 1.9 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein Cnn_1N PF07989.11 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.34 11.1 8.2 0.27 11.4 3.6 2.5 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 APC_N_CC PF16689.5 NODE_21248_length_944_cov_66.777778_g16345_i0forward_frame_1 - 0.7 10.0 5.2 0.48 10.5 0.7 2.9 2 1 1 3 3 3 0 Coiled-coil N-terminus of APC, dimerisation domain Isy1 PF06246.12 NODE_21237_length_944_cov_185.436744_g16335_i0forward_frame_1 - 3e-18 66.3 1.1 5.2e-18 65.5 1.1 1.4 1 0 0 1 1 1 1 Isy1-like splicing family DUF3408 PF11888.8 NODE_21101_length_948_cov_100.391019_g16227_i0reverse_frame_2 - 0.021 15.0 4.3 0.021 15.0 4.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3408) Tma16 PF11176.8 NODE_21101_length_948_cov_100.391019_g16227_i0reverse_frame_2 - 0.061 13.2 6.3 0.14 12.1 6.3 1.5 1 0 0 1 1 1 0 Translation machinery-associated protein 16 DUF2207 PF09972.9 NODE_21101_length_948_cov_100.391019_g16227_i0reverse_frame_2 - 0.58 8.9 10.6 0.48 9.1 7.3 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) IL5 PF02025.15 NODE_21101_length_948_cov_100.391019_g16227_i0reverse_frame_2 - 0.66 10.3 8.9 1.1 9.5 0.9 2.7 2 1 1 3 3 3 0 Interleukin 5 DUF724 PF05266.14 NODE_21101_length_948_cov_100.391019_g16227_i0reverse_frame_2 - 7.2 6.4 14.2 0.56 10.0 9.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DHC_N2 PF08393.13 NODE_21099_length_948_cov_116.736035_g16225_i0reverse_frame_3 - 4.3e-100 335.6 8.0 5.4e-100 335.3 8.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 GST_C_2 PF13410.6 ORF99955 - 2e-13 50.1 0.1 3.8e-13 49.2 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF99955 - 6.6e-10 39.1 0.0 1.4e-09 38.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF99955 - 3e-09 37.0 0.0 5.7e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF99955 - 0.00079 19.8 0.0 0.0017 18.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF99955 - 0.0011 19.2 0.0 0.0028 18.0 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF99955 - 0.0017 18.1 0.0 0.0031 17.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF99955 - 0.0021 18.3 0.0 0.0055 17.0 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glyco_hydro_31 PF01055.26 ORF99205 - 5.5e-18 65.4 0.2 9.1e-18 64.7 0.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Ribosomal_S6e PF01092.19 ORF9617 - 0.047 13.7 0.2 6.6 6.7 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein S6e Glyco_hydro_31 PF01055.26 ORF94372 - 5.5e-18 65.4 0.2 9.1e-18 64.7 0.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF4834 PF16118.5 ORF93035 - 0.53 11.3 7.6 0.84 10.6 0.1 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF4834) Sigma_reg_N PF13800.6 ORF93035 - 1.5 9.1 7.1 2.2 8.6 0.1 3.4 3 1 1 4 4 4 0 Sigma factor regulator N-terminal ABC2_membrane_3 PF12698.7 ORF93035 - 2.3 7.2 20.6 0.097 11.8 13.3 2.1 1 1 1 2 2 2 0 ABC-2 family transporter protein C2 PF00168.30 ORF89723 - 3.7e-16 59.3 0.2 5.3e-16 58.8 0.2 1.2 1 0 0 1 1 1 1 C2 domain PAF-AH_p_II PF03403.13 ORF88172 - 6.6e-32 110.5 0.4 2.7e-30 105.2 0.4 2.0 1 1 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 ORF88172 - 2.8e-06 26.4 0.0 5.9e-06 25.4 0.0 1.4 1 1 0 1 1 1 1 Chlorophyllase enzyme Hydrolase_4 PF12146.8 ORF88172 - 9.8e-06 25.0 0.0 0.001 18.4 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Esterase PF00756.20 ORF88172 - 2.4e-05 24.1 0.0 0.00059 19.6 0.0 2.0 1 1 1 2 2 2 1 Putative esterase Abhydrolase_2 PF02230.16 ORF88172 - 0.00044 20.1 0.0 0.0015 18.4 0.0 1.8 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.20 ORF88172 - 0.00097 18.8 0.1 0.002 17.8 0.1 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF88172 - 0.0012 19.5 0.0 0.0021 18.7 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF88172 - 0.0015 18.1 0.0 0.003 17.0 0.0 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase family Chlorophyllase PF07224.11 ORF88172 - 0.0022 17.1 0.0 0.72 8.8 0.0 2.2 2 0 0 2 2 2 2 Chlorophyllase Prion PF00377.18 ORF88172 - 0.0053 16.6 0.9 0.35 10.7 0.3 2.4 2 0 0 2 2 2 1 Prion/Doppel alpha-helical domain DUF676 PF05057.14 ORF88172 - 0.0059 16.1 0.0 0.015 14.8 0.0 1.7 1 1 1 2 2 2 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 ORF88172 - 0.013 15.3 0.4 0.028 14.2 0.4 1.5 1 1 0 1 1 1 0 PGAP1-like protein Abhydrolase_5 PF12695.7 ORF88172 - 0.014 15.2 0.0 0.32 10.8 0.0 2.2 2 0 0 2 2 2 0 Alpha/beta hydrolase family LIDHydrolase PF10230.9 ORF88172 - 0.019 14.5 0.0 0.032 13.8 0.0 1.4 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Thioesterase PF00975.20 ORF88172 - 0.023 14.8 0.0 0.055 13.6 0.0 1.7 1 0 0 1 1 1 0 Thioesterase domain Abhydrolase_3 PF07859.13 ORF88172 - 0.046 13.6 0.0 0.079 12.8 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold Pyr_redox PF00070.27 ORF88172 - 0.079 13.5 0.3 3.3 8.3 0.1 3.0 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Ion_trans PF00520.31 ORF8745 - 1.9e-16 60.0 25.0 2.6e-16 59.6 25.0 1.1 1 0 0 1 1 1 1 Ion transport protein TIR_2 PF13676.6 ORF86887 - 0.0022 18.6 0.0 0.0045 17.6 0.0 1.6 1 1 0 1 1 1 1 TIR domain HET PF06985.11 ORF86887 - 0.18 12.1 0.4 0.65 10.3 0.0 1.9 2 1 0 2 2 2 0 Heterokaryon incompatibility protein (HET) TIR PF01582.20 ORF86887 - 0.18 11.6 0.0 0.3 10.9 0.0 1.2 1 0 0 1 1 1 0 TIR domain WES_acyltransf PF03007.16 ORF8485 - 2e-10 40.9 0.0 2.9e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 ORF8485 - 0.064 11.9 0.1 0.11 11.2 0.1 1.3 1 0 0 1 1 1 0 Condensation domain GTP_EFTU PF00009.27 ORF84598 - 7.5e-56 188.8 0.2 9.1e-56 188.5 0.2 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF84598 - 2.1e-13 50.4 2.2 3e-13 50.0 1.0 1.9 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF84598 - 2.4e-05 24.4 0.1 4.5e-05 23.5 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase cobW PF02492.19 ORF84598 - 0.0048 16.5 0.0 0.016 14.8 0.0 1.7 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 ORF84598 - 0.021 14.8 0.1 0.042 13.7 0.0 1.6 2 0 0 2 2 2 0 RsgA GTPase LRR_6 PF13516.6 ORF82667 - 5.5e-06 26.0 10.9 0.019 15.0 0.1 6.0 8 0 0 8 8 8 2 Leucine Rich repeat LRR_4 PF12799.7 ORF82667 - 0.014 15.8 6.9 7.2 7.2 0.7 4.2 4 1 0 4 4 4 0 Leucine Rich repeats (2 copies) DUF5642 PF18702.1 ORF82667 - 0.043 13.6 0.0 0.11 12.3 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5642) LRR_8 PF13855.6 ORF82667 - 0.047 13.4 7.3 20 5.0 0.1 4.6 2 2 0 3 3 3 0 Leucine rich repeat Glyco_hydro_31 PF01055.26 ORF8116 - 5.5e-18 65.4 0.2 9.1e-18 64.7 0.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 MR_MLE_C PF13378.6 ORF7900 - 1.8e-37 129.1 0.0 2.2e-37 128.8 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 ORF7900 - 5.7e-07 29.8 0.0 9e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BT1 PF03092.16 ORF78747 - 2.4e-09 36.0 1.0 6.6e-09 34.5 1.0 1.6 1 1 0 1 1 1 1 BT1 family Aldo_ket_red PF00248.21 ORF75802 - 1.8e-38 132.4 0.0 2.6e-36 125.3 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family CENP-F_leu_zip PF10473.9 ORF75228 - 1 9.4 21.5 1.3 9.0 10.2 2.3 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BBS1 PF14779.6 ORF75228 - 2.6 7.4 6.5 5.3 6.4 1.0 2.1 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 1 TSC22 PF01166.18 ORF75228 - 2.8 8.3 8.0 16 5.9 0.1 3.3 3 0 0 3 3 3 0 TSC-22/dip/bun family Shisa PF13908.6 ORF73657 - 0.055 13.7 0.4 3.7 7.8 0.1 2.2 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator WD40 PF00400.32 ORF73380 - 0.0013 19.5 0.2 4.9 8.2 0.1 3.3 2 0 0 2 2 2 2 WD domain, G-beta repeat Paz_1 PF18349.1 ORF73380 - 0.07 13.1 0.2 0.17 11.9 0.2 1.6 1 0 0 1 1 1 0 PAZ domain PARP PF00644.20 ORF71826 - 5.1e-15 55.6 0.0 8.5e-15 54.9 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain BCIP PF13862.6 ORF7168 - 6.4e-43 146.9 0.0 8.3e-43 146.6 0.0 1.1 1 0 0 1 1 1 1 p21-C-terminal region-binding protein NDK PF00334.19 ORF7145 - 7.4e-53 178.2 0.0 3.2e-39 134.0 0.0 2.2 2 0 0 2 2 2 2 Nucleoside diphosphate kinase DUF1126 PF06565.12 ORF7145 - 6.8e-06 25.8 0.4 1.6e-05 24.6 0.4 1.6 1 0 0 1 1 1 1 DUF1126 PH-like domain SEP PF08059.13 ORF7145 - 0.1 13.2 0.0 17 6.0 0.0 2.5 2 0 0 2 2 2 0 SEP domain ANAPC4_WD40 PF12894.7 ORF70365 - 5.8e-07 29.7 0.4 0.22 11.9 0.0 4.0 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF70365 - 3.4e-06 27.7 7.0 0.61 11.1 0.3 5.4 5 0 0 5 5 5 2 WD domain, G-beta repeat PAN_4 PF14295.6 ORF69297 - 0.00021 21.1 0.4 0.00021 21.1 0.4 2.3 3 0 0 3 3 3 1 PAN domain PAN_1 PF00024.26 ORF69297 - 0.00041 20.3 1.6 0.00042 20.2 0.2 1.7 2 0 0 2 2 2 1 PAN domain Pkinase PF00069.25 ORF6811 - 6.4e-51 173.2 0.1 7.4e-51 173.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6811 - 1.6e-24 86.6 0.0 2.3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF6811 - 0.0027 17.1 0.0 0.0039 16.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF6811 - 0.11 11.9 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family MFS_1 PF07690.16 ORF67407 - 0.0018 17.2 32.7 0.04 12.8 28.6 2.5 1 1 2 3 3 3 3 Major Facilitator Superfamily WD40 PF00400.32 ORF67152 - 0.0013 19.5 0.2 4.9 8.2 0.1 3.3 2 0 0 2 2 2 2 WD domain, G-beta repeat Paz_1 PF18349.1 ORF67152 - 0.07 13.1 0.2 0.17 11.9 0.2 1.6 1 0 0 1 1 1 0 PAZ domain VEG PF06257.11 ORF65355 - 0.053 13.6 0.1 0.1 12.7 0.1 1.4 1 0 0 1 1 1 0 Biofilm formation stimulator VEG Astro_capsid_p PF12226.8 ORF65355 - 0.11 11.7 1.6 0.15 11.2 1.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein KOW PF00467.29 ORF65355 - 0.13 12.3 0.1 0.3 11.1 0.1 1.6 1 0 0 1 1 1 0 KOW motif Kinesin PF00225.23 ORF65061 - 3.1e-47 161.2 0.0 5.2e-47 160.4 0.0 1.4 1 0 0 1 1 1 1 Kinesin motor domain EF-hand_4 PF12763.7 ORF64174 - 0.00015 21.7 0.0 0.00029 20.7 0.0 1.5 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_7 PF13499.6 ORF64174 - 0.00015 22.1 0.3 0.00029 21.2 0.3 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF64174 - 0.0017 18.1 0.3 0.049 13.6 0.1 2.5 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF64174 - 0.0039 16.6 0.1 0.01 15.3 0.1 1.7 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF64174 - 0.13 12.2 0.1 0.73 9.7 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain pair Glyco_hydro_31 PF01055.26 ORF63632 - 5.5e-18 65.4 0.2 9.1e-18 64.7 0.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 ubiquitin PF00240.23 ORF62768 - 1.1e-27 95.5 0.0 2e-20 72.3 0.0 2.6 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF62768 - 5.6e-09 35.7 0.1 4.4e-07 29.6 0.0 2.5 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF62768 - 0.00088 19.6 0.0 0.55 10.6 0.0 3.6 3 1 1 4 4 4 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 ORF62768 - 0.028 14.9 0.0 0.33 11.4 0.0 2.7 2 1 0 2 2 2 0 Ubiquitin-like domain YukD PF08817.10 ORF62768 - 0.098 13.4 0.0 0.28 11.9 0.0 1.8 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD Radical_SAM PF04055.21 ORF60630 - 1.2e-21 77.8 0.0 1.8e-21 77.2 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 ORF60630 - 1.8e-10 41.2 0.1 4.1e-10 40.1 0.1 1.6 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 ORF60630 - 0.00019 21.6 0.4 0.047 13.8 0.4 2.4 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_6 PF12837.7 ORF60630 - 0.14 12.3 1.8 0.32 11.1 1.8 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_9 PF13187.6 ORF60630 - 0.49 10.6 6.8 1.1 9.5 6.8 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain WD40 PF00400.32 ORF60586 - 0.0013 19.5 0.2 4.9 8.2 0.1 3.3 2 0 0 2 2 2 2 WD domain, G-beta repeat Paz_1 PF18349.1 ORF60586 - 0.07 13.1 0.2 0.17 11.9 0.2 1.6 1 0 0 1 1 1 0 PAZ domain DUF4834 PF16118.5 ORF59917 - 0.53 11.3 7.6 0.84 10.6 0.1 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF4834) Sigma_reg_N PF13800.6 ORF59917 - 1.5 9.1 7.1 2.2 8.6 0.1 3.4 3 1 1 4 4 4 0 Sigma factor regulator N-terminal ABC2_membrane_3 PF12698.7 ORF59917 - 2.3 7.2 20.6 0.097 11.8 13.3 2.1 1 1 1 2 2 2 0 ABC-2 family transporter protein Pkinase PF00069.25 ORF59417 - 6.4e-51 173.2 0.1 7.4e-51 173.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF59417 - 1.6e-24 86.6 0.0 2.3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF59417 - 0.0027 17.1 0.0 0.0039 16.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF59417 - 0.11 11.9 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Peptidase_C1 PF00112.23 ORF5687 - 2.8e-56 191.1 6.0 2.8e-56 191.1 6.0 1.7 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF5687 - 1.4e-13 51.1 5.9 2.9e-13 50.0 5.9 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF5687 - 9.6e-06 24.6 1.2 0.0027 16.5 1.2 2.3 2 0 0 2 2 2 2 Peptidase C1-like family Band_7 PF01145.25 ORF5577 - 2.8e-19 69.8 0.1 2.8e-19 69.8 0.1 2.1 1 1 1 2 2 2 1 SPFH domain / Band 7 family DUF1515 PF07439.11 ORF5577 - 0.034 14.2 2.4 0.058 13.4 2.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) VIT1 PF01988.19 ORF5577 - 2.7 7.8 3.9 5.3 6.8 3.9 1.4 1 0 0 1 1 1 0 VIT family WD40 PF00400.32 ORF55087 - 0.0013 19.5 0.2 4.9 8.2 0.1 3.3 2 0 0 2 2 2 2 WD domain, G-beta repeat Paz_1 PF18349.1 ORF55087 - 0.07 13.1 0.2 0.17 11.9 0.2 1.6 1 0 0 1 1 1 0 PAZ domain TPR_12 PF13424.6 ORF53368 - 1.7e-33 114.7 14.9 2.5e-13 50.1 0.6 4.1 2 1 2 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF53368 - 2.6e-13 49.0 10.8 0.00061 19.7 1.6 6.2 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF53368 - 9.3e-13 47.6 0.9 0.07 13.0 0.0 5.8 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF53368 - 5.9e-10 38.5 13.1 0.012 15.5 1.4 5.8 6 1 0 6 6 6 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF53368 - 6.1e-10 39.5 7.0 0.00029 21.3 0.1 4.2 2 1 2 4 4 4 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF53368 - 2.8e-08 33.9 7.9 0.036 14.3 0.5 4.5 2 2 3 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_MalT PF17874.1 ORF53368 - 2.7e-07 30.3 1.4 1.1e-06 28.3 1.3 1.7 1 1 0 1 1 1 1 MalT-like TPR region TPR_8 PF13181.6 ORF53368 - 2.7e-07 30.3 19.0 0.0034 17.5 1.4 5.9 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF53368 - 2.9e-05 24.5 1.3 3.3 8.8 0.0 5.5 4 2 1 6 6 6 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF53368 - 3.1e-05 24.5 0.4 0.3 11.8 0.0 4.0 4 1 0 4 4 4 1 Tetratricopeptide repeat RPN7 PF10602.9 ORF53368 - 6e-05 22.8 12.2 0.0023 17.7 3.9 3.3 1 1 1 3 3 3 2 26S proteasome subunit RPN7 TPR_20 PF14561.6 ORF53368 - 0.00012 22.4 6.2 0.63 10.4 0.2 4.1 2 2 2 4 4 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF53368 - 0.0004 20.5 5.9 8.2 7.1 0.0 5.3 6 1 1 7 7 6 0 Tetratricopeptide repeat PPR PF01535.20 ORF53368 - 0.0011 19.1 3.6 12 6.4 0.0 5.2 6 0 0 6 6 5 0 PPR repeat DUF357 PF04010.13 ORF53368 - 0.0016 18.4 1.1 0.94 9.6 0.2 3.2 3 0 0 3 3 2 1 Protein of unknown function (DUF357) TPR_18 PF13512.6 ORF53368 - 0.0018 18.4 0.3 0.005 17.0 0.3 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF53368 - 0.002 17.8 11.5 0.51 10.1 0.7 5.2 5 2 0 5 5 5 2 TPR repeat YfiO PF13525.6 ORF53368 - 0.019 14.7 3.4 0.041 13.6 2.8 1.9 1 1 1 2 2 2 0 Outer membrane lipoprotein TPR_6 PF13174.6 ORF53368 - 0.036 14.7 6.1 43 5.0 0.1 4.7 4 0 0 4 4 4 0 Tetratricopeptide repeat Pep3_Vps18 PF05131.14 ORF53368 - 0.052 13.4 5.0 17 5.2 0.1 3.6 4 0 0 4 4 3 0 Pep3/Vps18/deep orange family SRP_TPR_like PF17004.5 ORF53368 - 0.36 10.8 15.5 0.43 10.6 2.1 3.4 1 1 2 3 3 3 0 Putative TPR-like repeat TPR_3 PF07720.12 ORF53368 - 0.48 10.5 4.9 0.77 9.8 0.1 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat PBP1_TM PF14812.6 ORF53368 - 0.55 10.6 9.6 2.2 8.7 9.6 2.0 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF2225 PF09986.9 ORF53368 - 0.99 9.1 12.0 8 6.1 11.8 2.5 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) Vps39_1 PF10366.9 ORF53368 - 1.2 9.4 8.9 0.2 11.9 2.1 2.8 2 2 0 2 2 2 0 Vacuolar sorting protein 39 domain 1 RSS_P20 PF11757.8 ORF53368 - 2.1 8.9 12.9 4.4 7.8 0.3 4.1 4 0 0 4 4 3 0 Suppressor of RNA silencing P21-like N-terminal domain Asp PF00026.23 ORF53138 - 1.9e-32 113.0 8.6 2.6e-32 112.5 8.6 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease fragilysinNterm PF16376.5 ORF53138 - 0.0027 17.5 0.0 0.0051 16.6 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain of fragilysin Ion_trans PF00520.31 ORF53001 - 1.2e-15 57.4 7.8 1.8e-15 56.8 7.8 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF53001 - 1.2e-09 37.3 0.4 0.00041 20.0 0.6 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF53001 - 1.7e-09 36.5 0.5 0.0029 17.0 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF53001 - 3.4e-08 33.8 3.4 3.2e-06 27.5 0.2 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF53001 - 2.7e-07 29.8 1.0 0.0041 16.5 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF53001 - 8e-06 25.6 1.5 0.022 14.6 1.1 2.4 2 0 0 2 2 2 2 EF-hand domain pair PKD_channel PF08016.12 ORF53001 - 1.4 7.5 8.0 2.5 6.7 8.0 1.4 1 1 0 1 1 1 0 Polycystin cation channel SIT PF15330.6 ORF51631 - 0.15 12.5 0.9 0.77 10.2 0.1 2.4 3 1 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT Peptidase_C1 PF00112.23 ORF51567 - 1.8e-57 195.0 5.4 2.4e-57 194.5 5.4 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF51567 - 2e-10 40.9 0.3 4e-10 40.0 0.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF51567 - 9.2e-06 24.7 3.3 0.0087 14.9 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF50847 - 2.4e-57 194.5 4.9 3.2e-57 194.1 4.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF50847 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF50847 - 9.8e-06 24.6 3.5 0.0083 14.9 0.3 2.4 2 1 0 2 2 2 2 Peptidase C1-like family Mod_r PF07200.13 ORF49813 - 0.025 14.7 2.7 0.025 14.7 2.7 2.3 2 1 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein GOLGA2L5 PF15070.6 ORF49813 - 0.05 12.3 7.5 0.63 8.6 0.1 2.2 2 0 0 2 2 2 0 Putative golgin subfamily A member 2-like protein 5 NYD-SP28 PF14772.6 ORF49813 - 0.072 13.2 4.5 4.6 7.4 0.0 2.6 2 0 0 2 2 2 0 Sperm tail Exonuc_VII_S PF02609.16 ORF49813 - 0.092 12.8 0.5 2.6 8.2 0.0 2.6 2 0 0 2 2 2 0 Exonuclease VII small subunit CLZ PF16526.5 ORF49813 - 0.093 13.1 4.6 0.36 11.2 0.1 2.7 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Med9 PF07544.13 ORF49813 - 0.11 12.6 3.0 2.3 8.4 0.0 2.8 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 AAA_32 PF13654.6 ORF49813 - 0.14 10.9 1.5 0.21 10.4 1.5 1.2 1 0 0 1 1 1 0 AAA domain Cytochrom_B562 PF07361.11 ORF49813 - 0.74 10.5 3.1 0.94 10.2 0.6 2.3 2 0 0 2 2 2 0 Cytochrome b562 TPR_MLP1_2 PF07926.12 ORF49813 - 0.9 9.6 9.4 1.4 9.0 0.2 2.6 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein DotU PF09850.9 ORF49813 - 1.6 8.4 7.5 7.6 6.2 1.5 2.9 2 1 0 2 2 2 0 Type VI secretion system protein DotU Apolipoprotein PF01442.18 ORF49813 - 1.8 8.4 17.3 19 5.0 17.2 2.2 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain ARGLU PF15346.6 ORF49813 - 2.9 7.7 9.5 1.2 9.0 0.5 3.0 3 0 0 3 3 3 0 Arginine and glutamate-rich 1 TPR_14 PF13428.6 ORF49813 - 6.9 7.8 10.5 0.28 12.1 1.6 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat Glyco_hydro_31 PF01055.26 ORF46425 - 5.5e-18 65.4 0.2 9.1e-18 64.7 0.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DivIC PF04977.15 ORF44302 - 0.1 12.4 2.7 2.1 8.1 0.3 2.8 2 0 0 2 2 2 0 Septum formation initiator HLH PF00010.26 ORF44302 - 1.3 9.1 5.9 0.74 9.8 0.2 2.8 3 0 0 3 3 3 0 Helix-loop-helix DNA-binding domain bZIP_1 PF00170.21 ORF44302 - 5 7.3 11.9 6 7.0 1.9 3.6 3 0 0 3 3 3 0 bZIP transcription factor PPR PF01535.20 ORF42143 - 0.0004 20.5 0.0 43 4.7 0.0 5.0 5 0 0 5 5 5 1 PPR repeat TPR_7 PF13176.6 ORF42143 - 0.019 15.0 0.1 15 5.9 0.0 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat Vps36-NZF-N PF16988.5 ORF42139 - 0.023 14.1 0.7 0.07 12.5 0.7 1.9 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-Sec23_Sec24 PF04810.15 ORF42139 - 1.2 9.2 5.3 0.16 12.1 0.7 1.9 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger Sar8_2 PF03058.14 ORF42139 - 1.7 9.2 7.4 0.21 12.2 2.5 2.1 2 1 0 2 2 2 0 Sar8.2 family Ribosomal_S20p PF01649.18 ORF41787 - 0.12 13.1 0.0 0.33 11.6 0.0 1.8 2 0 0 2 2 2 0 Ribosomal protein S20 FlxA PF14282.6 ORF39193 - 0.11 12.5 38.4 3.4 7.7 2.3 4.4 2 1 2 4 4 4 0 FlxA-like protein Bul1_C PF04426.12 ORF39193 - 0.64 9.4 35.0 1.5 8.1 28.8 3.1 1 1 1 2 2 2 0 Bul1 C terminus DASH_Dam1 PF08653.10 ORF39193 - 1.9 8.4 8.5 3.2 7.6 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 DUF1818 PF08848.11 ORF39193 - 2.5 8.2 9.7 1 9.5 1.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1818) Lebercilin PF15619.6 ORF39193 - 4.3 7.0 53.0 3.1 7.4 36.3 3.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Vps36-NZF-N PF16988.5 ORF39061 - 0.023 14.1 0.7 0.07 12.5 0.7 1.9 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-Sec23_Sec24 PF04810.15 ORF39061 - 1.2 9.2 5.3 0.16 12.1 0.7 1.9 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger Sar8_2 PF03058.14 ORF39061 - 1.7 9.2 7.4 0.21 12.2 2.5 2.1 2 1 0 2 2 2 0 Sar8.2 family TPR_2 PF07719.17 ORF38726 - 3.2e-19 67.4 6.7 6e-05 22.8 0.0 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF38726 - 4e-19 67.5 4.5 5.3e-05 22.9 0.0 4.4 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_8 PF13181.6 ORF38726 - 1.9e-12 46.4 2.3 0.0016 18.5 0.2 4.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF38726 - 2.3e-12 46.6 8.7 0.0014 19.2 0.1 5.2 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF38726 - 1.8e-11 44.2 12.2 0.0027 17.9 0.3 4.3 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF38726 - 4.3e-11 42.3 4.1 1.8e-05 24.3 0.0 4.3 3 2 1 4 4 4 3 TPR repeat TPR_19 PF14559.6 ORF38726 - 1.1e-09 38.6 6.7 0.00053 20.5 2.9 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF38726 - 1.2e-08 34.8 6.7 0.0056 17.0 0.0 5.3 5 1 1 6 6 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF38726 - 1.4e-08 34.2 4.6 0.083 13.0 0.1 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF38726 - 3.6e-05 23.5 9.2 0.31 11.0 0.1 4.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF38726 - 5.3e-05 23.3 6.9 0.095 12.9 1.9 4.6 2 1 4 6 6 6 3 Tetratricopeptide repeat TPR_15 PF13429.6 ORF38726 - 0.0002 20.7 1.4 0.058 12.6 0.3 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF38726 - 0.00091 19.8 13.0 0.12 13.0 0.2 4.3 4 1 0 4 4 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF38726 - 0.0023 18.4 8.2 0.12 13.0 1.5 4.1 4 0 0 4 4 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF38726 - 0.0023 18.1 3.2 0.004 17.3 0.2 2.5 2 1 1 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 ORF38726 - 0.003 18.1 9.4 11 6.9 0.1 4.8 5 0 0 5 5 4 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF38726 - 0.014 14.8 6.7 0.8 9.0 0.1 3.0 2 2 1 3 3 3 0 MalT-like TPR region DUF3856 PF12968.7 ORF38726 - 0.021 14.9 0.2 6.3 6.9 0.0 3.2 1 1 1 3 3 3 0 Domain of Unknown Function (DUF3856) TPR_3 PF07720.12 ORF38726 - 0.022 14.7 1.8 0.31 11.1 0.4 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat BTAD PF03704.17 ORF38726 - 0.054 13.9 1.3 6.5 7.2 0.1 2.8 2 1 1 3 3 3 0 Bacterial transcriptional activator domain Coatomer_E PF04733.14 ORF38726 - 0.11 12.0 0.2 0.87 8.9 0.1 2.2 2 1 0 2 2 2 0 Coatomer epsilon subunit MIT PF04212.18 ORF38726 - 0.11 12.6 3.5 0.18 11.9 0.3 2.9 2 1 1 3 3 3 0 MIT (microtubule interacting and transport) domain NARP1 PF12569.8 ORF38726 - 0.19 10.6 0.2 1.3 7.9 0.1 1.9 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 WD40 PF00400.32 ORF38600 - 0.0013 19.5 0.2 4.9 8.2 0.1 3.3 2 0 0 2 2 2 2 WD domain, G-beta repeat Paz_1 PF18349.1 ORF38600 - 0.07 13.1 0.2 0.17 11.9 0.2 1.6 1 0 0 1 1 1 0 PAZ domain UPF0184 PF03670.13 ORF379 - 0.032 14.6 0.1 1.7 9.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0184) FlxA PF14282.6 ORF37526 - 0.11 12.5 38.4 3.4 7.7 2.3 4.4 2 1 2 4 4 4 0 FlxA-like protein Bul1_C PF04426.12 ORF37526 - 0.64 9.4 35.0 1.5 8.1 28.8 3.1 1 1 1 2 2 2 0 Bul1 C terminus DASH_Dam1 PF08653.10 ORF37526 - 1.9 8.4 8.5 3.2 7.6 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 DUF1818 PF08848.11 ORF37526 - 2.5 8.2 9.7 1 9.5 1.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1818) Lebercilin PF15619.6 ORF37526 - 4.3 7.0 53.0 3.1 7.4 36.3 3.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Peptidase_C1 PF00112.23 ORF35793 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF35793 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF35793 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family TIR_2 PF13676.6 ORF34415 - 0.0022 18.6 0.0 0.0045 17.6 0.0 1.6 1 1 0 1 1 1 1 TIR domain HET PF06985.11 ORF34415 - 0.18 12.1 0.4 0.65 10.3 0.0 1.9 2 1 0 2 2 2 0 Heterokaryon incompatibility protein (HET) TIR PF01582.20 ORF34415 - 0.18 11.6 0.0 0.3 10.9 0.0 1.2 1 0 0 1 1 1 0 TIR domain Pkinase PF00069.25 ORF33612 - 6.4e-51 173.2 0.1 7.4e-51 173.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33612 - 1.6e-24 86.6 0.0 2.3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF33612 - 0.0027 17.1 0.0 0.0039 16.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF33612 - 0.11 11.9 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FlxA PF14282.6 ORF32158 - 0.11 12.5 38.4 3.4 7.7 2.3 4.4 2 1 2 4 4 4 0 FlxA-like protein Bul1_C PF04426.12 ORF32158 - 0.64 9.4 35.0 1.5 8.1 28.8 3.1 1 1 1 2 2 2 0 Bul1 C terminus DASH_Dam1 PF08653.10 ORF32158 - 1.9 8.4 8.5 3.2 7.6 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 DUF1818 PF08848.11 ORF32158 - 2.5 8.2 9.7 1 9.5 1.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1818) Lebercilin PF15619.6 ORF32158 - 4.3 7.0 53.0 3.1 7.4 36.3 3.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease FlxA PF14282.6 ORF26587 - 0.11 12.5 38.4 3.4 7.7 2.3 4.4 2 1 2 4 4 4 0 FlxA-like protein Bul1_C PF04426.12 ORF26587 - 0.64 9.4 35.0 1.5 8.1 28.8 3.1 1 1 1 2 2 2 0 Bul1 C terminus DASH_Dam1 PF08653.10 ORF26587 - 1.9 8.4 8.5 3.2 7.6 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 DUF1818 PF08848.11 ORF26587 - 2.5 8.2 9.7 1 9.5 1.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1818) Lebercilin PF15619.6 ORF26587 - 4.3 7.0 53.0 3.1 7.4 36.3 3.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Peptidase_C1 PF00112.23 ORF259 - 2.6e-57 194.4 5.7 3.5e-57 194.0 5.7 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF259 - 2.1e-10 40.8 0.3 4e-10 40.0 0.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF259 - 5.9e-06 25.3 2.9 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family Pkinase PF00069.25 ORF24193 - 6.4e-51 173.2 0.1 7.4e-51 173.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24193 - 1.6e-24 86.6 0.0 2.3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF24193 - 0.0027 17.1 0.0 0.0039 16.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF24193 - 0.11 11.9 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family COX_ARM PF06481.14 ORF23900 - 3.5e-19 68.4 0.1 2.7e-18 65.6 0.5 2.1 2 0 0 2 2 2 1 COX Aromatic Rich Motif COX2 PF00116.20 ORF23900 - 6.9e-06 26.0 0.1 2.5e-05 24.1 0.0 1.9 1 1 1 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain FtsX PF02687.21 ORF23900 - 0.002 18.6 0.8 0.0045 17.4 0.8 1.5 1 0 0 1 1 1 1 FtsX-like permease family Cupredoxin_1 PF13473.6 ORF23900 - 0.0023 18.0 0.0 0.0059 16.7 0.0 1.6 1 0 0 1 1 1 1 Cupredoxin-like domain COX2_TM PF02790.15 ORF23900 - 0.0025 17.9 0.6 0.0054 16.9 0.6 1.6 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, transmembrane domain TspO_MBR PF03073.15 ORF23900 - 0.13 12.3 5.0 0.24 11.5 5.0 1.4 1 0 0 1 1 1 0 TspO/MBR family DUF5385 PF17359.2 ORF23900 - 0.17 11.4 0.1 0.27 10.7 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Peptidase_C1 PF00112.23 ORF22781 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF22781 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF22781 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family DNA_pol_A_exo1 PF01612.20 ORF2197 - 4.5e-13 49.3 0.1 1.1e-12 48.0 0.1 1.6 1 1 0 1 1 1 1 3'-5' exonuclease Lactamase_B_3 PF13483.6 ORF19273 - 9.3e-06 25.6 0.0 1.4e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain FlxA PF14282.6 ORF18984 - 0.11 12.5 38.4 3.4 7.7 2.3 4.4 2 1 2 4 4 4 0 FlxA-like protein Bul1_C PF04426.12 ORF18984 - 0.64 9.4 35.0 1.5 8.1 28.8 3.1 1 1 1 2 2 2 0 Bul1 C terminus DASH_Dam1 PF08653.10 ORF18984 - 1.9 8.4 8.5 3.2 7.6 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 DUF1818 PF08848.11 ORF18984 - 2.5 8.2 9.7 1 9.5 1.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1818) Lebercilin PF15619.6 ORF18984 - 4.3 7.0 53.0 3.1 7.4 36.3 3.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Mo25 PF08569.11 ORF17451 - 1.4e-22 80.5 13.1 1.6e-22 80.3 13.1 1.0 1 0 0 1 1 1 1 Mo25-like VHS PF00790.19 ORF17451 - 0.00099 19.0 4.8 0.0022 17.8 0.2 2.9 2 1 1 3 3 3 1 VHS domain Katanin_con80 PF13925.6 ORF17451 - 0.0075 16.3 2.5 0.58 10.2 0.0 3.5 3 1 1 4 4 4 1 con80 domain of Katanin Rcd1 PF04078.13 ORF17451 - 0.032 13.5 3.5 0.15 11.3 3.5 2.2 1 1 0 1 1 1 0 Cell differentiation family, Rcd1-like Elf4 PF07011.11 ORF17451 - 0.11 12.4 2.8 1.4 8.9 0.1 2.6 2 0 0 2 2 2 0 Early Flowering 4 domain RMI2 PF16100.5 ORF15591 - 1.6e-06 27.9 0.0 2.5e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 RecQ-mediated genome instability protein 2 tRNA_anti-codon PF01336.25 ORF15591 - 1.9e-05 24.5 0.0 3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 ORF15591 - 0.012 15.8 0.0 0.02 15.0 0.0 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Ldh_1_N PF00056.23 ORF14710 - 1.2e-36 125.9 0.1 1.9e-36 125.3 0.1 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF14710 - 3e-24 85.8 0.0 4.8e-24 85.2 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 ORF14710 - 0.0051 16.4 1.4 0.062 12.8 0.3 2.2 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase PhyH PF05721.13 ORF11699 - 1.4e-10 41.8 0.0 2.6e-10 40.9 0.0 1.4 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) KH_1 PF00013.29 ORF110406 - 5.9e-25 86.9 0.1 3e-14 52.6 0.1 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF110406 - 0.00016 21.4 0.3 0.056 13.3 0.1 2.6 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 ORF110406 - 0.01 15.7 0.3 1.9 8.4 0.1 2.5 2 0 0 2 2 2 0 KH domain KH_5 PF13184.6 ORF110406 - 0.12 12.5 0.4 13 6.0 0.1 2.3 2 0 0 2 2 2 0 NusA-like KH domain Spc7 PF08317.11 ORF109006 - 0.00026 20.0 15.7 0.00026 20.0 15.7 2.5 3 0 0 3 3 3 1 Spc7 kinetochore protein ERM PF00769.19 ORF109006 - 0.00062 19.6 33.7 0.00062 19.6 33.7 2.5 2 1 1 3 3 3 1 Ezrin/radixin/moesin family DPM3 PF08285.11 ORF109006 - 0.91 9.8 2.2 3.4 7.9 2.2 2.0 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) CorA PF01544.18 ORF109006 - 3.4 6.9 13.0 3.9 6.7 2.3 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein V_ATPase_I PF01496.19 ORF109006 - 5.3 4.8 41.0 0.46 8.3 12.7 2.1 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family MtrB PF05440.12 ORF109006 - 8.8 6.8 7.3 15 6.1 0.4 3.2 3 1 1 4 4 4 0 Tetrahydromethanopterin S-methyltransferase subunit B Kinesin PF00225.23 ORF108591 - 3.1e-47 161.2 0.0 5.2e-47 160.4 0.0 1.4 1 0 0 1 1 1 1 Kinesin motor domain Citrate_synt PF00285.21 ORF107632 - 4.6e-108 361.5 0.2 5.1e-108 361.4 0.2 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Peptidase_C1 PF00112.23 ORF10735 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF10735 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF10735 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family Guanylate_cyc PF00211.20 ORF107102 - 4.1e-08 33.1 0.0 5.6e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Spherulin4 PF12138.8 ORF106721 - 9.2e-28 97.5 0.0 1.1e-27 97.2 0.0 1.1 1 0 0 1 1 1 1 Spherulation-specific family 4 Peptidase_C1 PF00112.23 ORF106414 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF106414 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF106414 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family 2OG-FeII_Oxy_3 PF13640.6 ORF10608 - 1.4e-07 32.3 0.0 2.3e-07 31.6 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Pkinase PF00069.25 ORF105853 - 4.9e-32 111.3 0.4 8.5e-32 110.6 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105853 - 1.8e-31 109.4 0.3 2.8e-31 108.7 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase Kdo PF06293.14 ORF105853 - 0.00029 20.3 0.0 0.0006 19.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF105853 - 0.00089 18.9 1.1 0.0012 18.5 0.1 1.7 2 0 0 2 2 2 1 RIO1 family HAP1_N PF04849.13 ORF105853 - 0.0039 16.5 0.3 0.0057 15.9 0.3 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region Pil1 PF13805.6 ORF105853 - 0.011 15.3 3.3 0.028 13.9 1.0 2.1 1 1 1 2 2 2 0 Eisosome component PIL1 DivIC PF04977.15 ORF105853 - 0.012 15.4 0.2 1.1 9.0 0.2 2.4 2 0 0 2 2 2 0 Septum formation initiator Haspin_kinase PF12330.8 ORF105853 - 0.013 14.5 2.5 0.013 14.5 0.1 2.0 2 1 0 2 2 2 0 Haspin like kinase domain Spectrin PF00435.21 ORF105853 - 0.018 15.5 0.8 0.082 13.4 0.3 2.1 1 1 1 2 2 2 0 Spectrin repeat DUF1843 PF08898.10 ORF105853 - 0.023 15.2 0.6 0.023 15.2 0.6 2.9 4 0 0 4 4 3 0 Domain of unknown function (DUF1843) Tup_N PF08581.10 ORF105853 - 0.029 14.7 0.5 5.5 7.4 0.5 2.4 2 0 0 2 2 2 0 Tup N-terminal Lzipper-MIP1 PF14389.6 ORF105853 - 0.037 14.3 0.3 2.1 8.7 0.0 2.8 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 FlxA PF14282.6 ORF105853 - 0.045 13.7 3.4 0.49 10.4 0.8 2.3 2 0 0 2 2 2 0 FlxA-like protein TSC22 PF01166.18 ORF105853 - 0.13 12.6 1.7 3.5 8.0 0.0 2.9 2 1 0 2 2 2 0 TSC-22/dip/bun family Kinase-like PF14531.6 ORF105853 - 0.13 11.5 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF105853 - 0.14 12.1 0.0 0.32 10.9 0.0 1.6 2 0 0 2 2 2 0 Phosphotransferase enzyme family TPR_MLP1_2 PF07926.12 ORF105853 - 0.16 12.0 4.1 1.8 8.6 0.1 2.2 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF1192 PF06698.11 ORF105853 - 0.2 11.7 1.0 3.6 7.7 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1192) BST2 PF16716.5 ORF105853 - 0.29 11.7 1.8 3 8.5 1.1 2.4 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 bZIP_2 PF07716.15 ORF105853 - 0.5 10.5 7.1 4.1 7.5 3.3 2.6 2 0 0 2 2 2 0 Basic region leucine zipper Choline_kinase PF01633.20 ORF105853 - 0.76 9.3 2.7 8 6.0 0.1 2.2 2 0 0 2 2 2 0 Choline/ethanolamine kinase Peptidase_C1 PF00112.23 ORF103511 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF103511 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF103511 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family PPR PF01535.20 ORF102895 - 0.0004 20.5 0.0 43 4.7 0.0 5.0 5 0 0 5 5 5 1 PPR repeat TPR_7 PF13176.6 ORF102895 - 0.019 15.0 0.1 15 5.9 0.0 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat Asp PF00026.23 ORF102012 - 1.9e-32 113.0 8.6 2.6e-32 112.5 8.6 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease fragilysinNterm PF16376.5 ORF102012 - 0.0027 17.5 0.0 0.0051 16.6 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain of fragilysin DUF667 PF05018.13 NODE_21400_length_940_cov_78.350276_g16470_i0reverse_frame_1 - 0.0014 18.4 0.0 0.0025 17.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF667) PQ-loop PF04193.14 NODE_21341_length_941_cov_274.078366_g16419_i0reverse_frame_1 - 3.8e-09 36.2 3.6 8.1e-09 35.1 3.6 1.6 1 0 0 1 1 1 1 PQ loop repeat Mito_carr PF00153.27 NODE_21303_length_942_cov_250.054024_g16387_i0forward_frame_1 - 2.5e-60 200.4 1.3 5e-20 71.2 0.1 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein Gln-synt_C PF00120.24 NODE_21293_length_943_cov_3.175110_g16379_i0reverse_frame_3 - 4.4e-41 141.0 0.0 6e-41 140.6 0.0 1.2 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N_2 PF16952.5 NODE_21293_length_943_cov_3.175110_g16379_i0reverse_frame_3 - 0.00011 22.0 0.0 0.0002 21.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase N-terminal domain DUF3327 PF11806.8 NODE_21293_length_943_cov_3.175110_g16379_i0forward_frame_2 - 0.49 11.1 3.7 0.47 11.2 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3327) MTCP1 PF08991.10 NODE_21287_length_943_cov_76.516520_g16375_i0reverse_frame_2 - 2 8.7 5.9 1.3 9.3 0.6 2.6 2 1 1 3 3 3 0 Mature-T-Cell Proliferation I type OAF PF14941.6 NODE_21269_length_943_cov_208.680617_g16360_i0forward_frame_3 - 0.015 14.7 0.1 0.022 14.2 0.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator, Out at first YmcE_antitoxin PF15939.5 NODE_21248_length_944_cov_66.777778_g16345_i0reverse_frame_2 - 0.067 13.4 2.6 0.18 11.9 2.6 1.8 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system Isy1 PF06246.12 NODE_21237_length_944_cov_185.436744_g16335_i0forward_frame_3 - 4.6e-15 55.9 3.5 7.9e-15 55.1 3.5 1.3 1 0 0 1 1 1 1 Isy1-like splicing family Isy1 PF06246.12 NODE_21237_length_944_cov_185.436744_g16335_i0forward_frame_2 - 7.1e-19 68.4 9.3 1e-18 67.8 9.3 1.2 1 0 0 1 1 1 1 Isy1-like splicing family COX16 PF14138.6 NODE_21237_length_944_cov_185.436744_g16335_i0forward_frame_2 - 5.9 7.5 8.2 4.4 7.9 5.0 2.5 2 1 0 2 2 2 0 Cytochrome c oxidase assembly protein COX16 Peptidase_C1 PF00112.23 ORF94292 - 1.5e-36 126.5 7.1 2e-36 126.1 7.1 1.2 1 0 0 1 1 1 1 Papain family cysteine protease DUF5500 PF17604.2 ORF94292 - 0.0034 17.4 0.1 1.5 9.0 0.0 2.3 2 0 0 2 2 2 2 Family of unknown function (DUF5500) EF-hand_6 PF13405.6 ORF92572 - 0.00019 21.1 0.0 0.018 15.0 0.0 3.1 2 1 1 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF92572 - 0.0022 17.4 0.0 0.36 10.5 0.0 3.0 3 1 0 3 3 3 1 EF hand EF-hand_7 PF13499.6 ORF92572 - 0.0071 16.8 4.7 0.0084 16.5 3.0 2.0 2 0 0 2 2 2 1 EF-hand domain pair EFhand_Ca_insen PF08726.10 ORF92572 - 0.0097 16.0 0.8 0.058 13.5 0.6 2.3 2 1 0 2 2 2 1 Ca2+ insensitive EF hand ALIX_LYPXL_bnd PF13949.6 ORF92572 - 0.017 14.4 1.7 0.035 13.4 1.7 1.5 1 1 0 1 1 1 0 ALIX V-shaped domain binding to HIV Serine_rich PF08824.10 ORF92572 - 0.022 14.7 1.8 0.039 13.9 0.1 2.1 2 0 0 2 2 2 0 Serine rich protein interaction domain QIL1 PF15884.5 ORF92572 - 0.13 12.9 0.1 2.1 9.0 0.0 2.3 2 0 0 2 2 2 0 MICOS complex subunit MIC13, QIL1 IATP PF04568.12 ORF92572 - 0.15 12.5 2.7 0.18 12.2 0.1 2.4 2 1 1 3 3 3 0 Mitochondrial ATPase inhibitor, IATP MCPsignal PF00015.21 ORF92572 - 0.21 11.4 4.2 1.8 8.4 0.2 2.7 2 1 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain CENP-F_leu_zip PF10473.9 ORF92572 - 0.7 9.9 8.0 1.3 9.0 8.0 1.5 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ACOX PF01756.19 ORF90059 - 4.3e-10 39.5 0.3 8.2e-10 38.5 0.3 1.4 1 0 0 1 1 1 1 Acyl-CoA oxidase BPD_transp_1 PF00528.22 ORF86990 - 1.2e-44 152.3 9.9 1.2e-44 152.3 9.9 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Renin_r PF07850.14 ORF86990 - 0.074 13.7 0.5 0.074 13.7 0.5 2.2 3 0 0 3 3 3 0 Renin receptor-like protein DUF3021 PF11457.8 ORF86990 - 0.97 9.8 10.6 2.9 8.2 1.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3021) PhyH PF05721.13 ORF86254 - 1.4e-24 87.6 0.3 1.7e-24 87.3 0.3 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) RIO1 PF01163.22 ORF86194 - 1.4e-06 28.0 0.0 2.5e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 ORF86194 - 1.2e-05 25.4 0.6 0.00011 22.3 0.1 2.4 2 1 0 3 3 3 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF86194 - 5.7e-05 22.6 0.0 8.2e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain GDP_Man_Dehyd PF16363.5 ORF84632 - 4.2e-88 295.9 0.0 5.1e-88 295.7 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF84632 - 3.5e-62 210.0 0.0 4.6e-62 209.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 ORF84632 - 8.2e-11 41.5 0.0 1.2e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 ORF84632 - 9.9e-09 34.7 0.0 1.6e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF84632 - 1.8e-08 33.9 0.0 2.6e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.19 ORF84632 - 1.5e-07 30.7 0.0 2.6e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Wound_ind PF08186.11 ORF81330 - 0.0072 16.7 1.8 0.27 11.7 0.2 2.9 3 0 0 3 3 3 1 Wound-inducible basic protein family mTERF PF02536.14 ORF81330 - 0.2 10.5 0.0 0.76 8.6 0.0 1.8 1 1 0 1 1 1 0 mTERF DUF3894 PF13033.6 ORF81330 - 0.24 11.5 0.1 2.7 8.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3894) MatE PF01554.18 ORF77051 - 1.3e-09 37.9 29.7 1.7e-05 24.6 19.0 3.4 3 1 0 3 3 3 2 MatE TraE PF05309.11 ORF77051 - 0.11 11.9 0.2 0.19 11.1 0.2 1.4 1 0 0 1 1 1 0 TraE protein PglL_A PF15864.5 ORF77051 - 0.32 10.8 0.0 0.32 10.8 0.0 3.1 5 0 0 5 5 5 0 Protein glycosylation ligase LigB PF02900.18 ORF74730 - 1.6e-91 306.2 0.0 1.8e-91 306.0 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase Metallophos PF00149.28 ORF70044 - 2.4e-31 109.8 0.1 3.8e-31 109.2 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF70044 - 0.03 14.8 0.4 0.056 13.9 0.4 1.4 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain zf-TAZ PF02135.16 ORF70044 - 0.031 14.7 1.6 0.031 14.7 1.6 1.7 2 0 0 2 2 2 0 TAZ zinc finger PseudoU_synth_2 PF00849.22 ORF70014 - 7.9e-17 61.8 0.0 1.1e-16 61.4 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase UPF0262 PF06793.12 ORF70014 - 0.16 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0262) Pkinase PF00069.25 ORF69614 - 4.5e-55 186.9 1.1 1.3e-42 146.0 0.8 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF69614 - 1.7e-31 109.5 0.2 8e-27 94.1 0.4 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF69614 - 0.00012 21.1 0.2 0.00019 20.5 0.2 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF69614 - 0.062 12.7 0.1 0.062 12.7 0.1 1.7 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF69614 - 0.077 12.3 0.0 0.18 11.1 0.0 1.6 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF69614 - 0.078 12.9 0.0 0.25 11.2 0.0 1.7 2 0 0 2 2 2 0 Phosphotransferase enzyme family Big_11 PF18200.1 ORF69614 - 0.093 12.7 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial Ig-like domain Pkinase_fungal PF17667.1 ORF69614 - 0.11 11.2 0.1 0.11 11.2 0.1 2.0 1 1 1 2 2 2 0 Fungal protein kinase YqfQ PF14181.6 ORF69614 - 1.5 8.9 5.0 2.4 8.3 5.0 1.2 1 0 0 1 1 1 0 YqfQ-like protein Glutaredoxin PF00462.24 ORF67755 - 6.6e-12 45.5 0.1 3.8e-11 43.0 0.0 2.1 2 0 0 2 2 2 1 Glutaredoxin PAP_fibrillin PF04755.12 ORF67755 - 1e-09 38.6 0.0 1.6e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 PAP_fibrillin Thioredoxin_2 PF13098.6 ORF67755 - 0.13 12.7 0.0 0.76 10.2 0.0 2.2 2 0 0 2 2 2 0 Thioredoxin-like domain MT-A70 PF05063.14 ORF67568 - 4e-50 170.1 0.0 5.6e-50 169.6 0.0 1.2 1 0 0 1 1 1 1 MT-A70 Fur_reg_FbpA PF13076.6 ORF67568 - 0.1 12.3 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Fur-regulated basic protein A Asp PF00026.23 ORF67382 - 6.3e-37 127.7 4.9 7.8e-37 127.4 4.9 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF67382 - 1.1e-09 38.8 0.2 0.0003 21.1 0.0 2.6 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal Pkinase PF00069.25 ORF6026 - 4.5e-55 186.9 1.1 1.3e-42 146.0 0.8 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6026 - 1.7e-31 109.5 0.2 8e-27 94.1 0.4 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF6026 - 0.00012 21.1 0.2 0.00019 20.5 0.2 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF6026 - 0.062 12.7 0.1 0.062 12.7 0.1 1.7 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF6026 - 0.077 12.3 0.0 0.18 11.1 0.0 1.6 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF6026 - 0.078 12.9 0.0 0.25 11.2 0.0 1.7 2 0 0 2 2 2 0 Phosphotransferase enzyme family Big_11 PF18200.1 ORF6026 - 0.093 12.7 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial Ig-like domain Pkinase_fungal PF17667.1 ORF6026 - 0.11 11.2 0.1 0.11 11.2 0.1 2.0 1 1 1 2 2 2 0 Fungal protein kinase YqfQ PF14181.6 ORF6026 - 1.5 8.9 5.0 2.4 8.3 5.0 1.2 1 0 0 1 1 1 0 YqfQ-like protein MFS_1 PF07690.16 ORF56904 - 3.9e-30 105.0 44.9 3.9e-30 105.0 44.9 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF56904 - 0.45 9.3 44.8 0.036 12.9 10.8 2.1 1 1 1 2 2 2 0 Sugar (and other) transporter EIIC-GAT PF03611.14 ORF56904 - 0.47 9.5 33.8 0.034 13.2 11.2 3.2 1 1 1 3 3 3 0 PTS system sugar-specific permease component Lig_chan PF00060.26 ORF56904 - 1.1 9.0 4.1 1.9 8.3 2.2 2.5 1 1 2 3 3 3 0 Ligand-gated ion channel WWE PF02825.20 ORF53703 - 0.036 14.6 0.2 1.1 9.8 0.2 2.7 2 1 0 2 2 2 0 WWE domain Helicase_C PF00271.31 ORF50792 - 2.3e-08 34.3 0.1 1.4e-07 31.8 0.1 2.1 1 1 0 1 1 1 1 Helicase conserved C-terminal domain HTH_6 PF01418.17 ORF50792 - 0.079 13.0 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family DUF3841 PF12952.7 ORF50535 - 7.2e-07 29.2 0.5 7.1e-06 25.9 0.5 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF3841) MFS_5 PF05631.14 ORF49384 - 7.6e-45 153.4 4.8 1e-44 152.9 4.8 1.2 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM Abhydrolase_6 PF12697.7 ORF48725 - 3.6 8.1 8.3 14 6.2 8.3 2.0 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF2457 PF10446.9 ORF48351 - 0.042 13.0 6.4 0.057 12.6 6.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Ground-like PF04155.18 ORF41241 - 0.052 14.2 0.0 0.13 12.9 0.0 1.7 1 0 0 1 1 1 0 Ground-like domain DUF1471 PF07338.13 ORF4051 - 3.3e-58 193.5 16.3 6.5e-21 74.1 0.2 3.7 4 0 0 4 4 4 3 Protein of unknown function (DUF1471) Metallophos PF00149.28 ORF40464 - 2.4e-31 109.8 0.1 3.8e-31 109.2 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF40464 - 0.03 14.8 0.4 0.056 13.9 0.4 1.4 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain zf-TAZ PF02135.16 ORF40464 - 0.031 14.7 1.6 0.031 14.7 1.6 1.7 2 0 0 2 2 2 0 TAZ zinc finger Peptidase_C1 PF00112.23 ORF40099 - 3.2e-59 200.7 3.2 5.2e-59 200.0 3.2 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF40099 - 2.2e-16 60.0 2.1 4.2e-16 59.1 2.1 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Fungal_lectin_2 PF18647.1 ORF40099 - 1 9.8 8.4 7.6 7.1 0.2 3.0 2 1 1 3 3 3 0 Alpha-galactosyl-binding fungal lectin WWE PF02825.20 ORF39443 - 0.036 14.6 0.2 1.1 9.8 0.2 2.7 2 1 0 2 2 2 0 WWE domain Pap_E4 PF02711.14 ORF34059 - 0.003 18.5 0.2 0.97 10.4 0.0 2.5 1 1 0 2 2 2 1 E4 protein Senescence_reg PF04520.13 ORF34059 - 0.23 12.3 7.3 0.38 11.6 7.3 1.4 1 0 0 1 1 1 0 Senescence regulator DUF4692 PF15763.5 ORF34059 - 0.62 10.5 11.2 0.21 12.0 3.3 2.1 2 0 0 2 2 2 0 Regulator of human erythroid cell expansion (RHEX) Cwf_Cwc_15 PF04889.12 ORF34059 - 0.9 9.2 2.7 8 6.1 0.5 2.2 2 0 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein TFIIF_alpha PF05793.12 ORF34059 - 5 5.6 14.6 6.5 5.2 14.6 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Secretin_N_2 PF07655.13 ORF34059 - 5.7 7.5 8.9 3.1 8.4 2.0 2.2 2 0 0 2 2 2 0 Secretin N-terminal domain DUF4200 PF13863.6 ORF31684 - 0.015 15.7 24.4 0.015 15.7 24.4 3.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) LCIB_C_CA PF18599.1 ORF31684 - 2.8 7.2 12.8 0.35 10.1 7.5 2.1 1 1 1 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases NPV_P10 PF05531.12 ORF31684 - 4.8 7.7 13.5 2.8 8.5 0.5 3.4 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein TruB_N PF01509.18 ORF2968 - 1.1e-57 194.6 0.0 1.4e-57 194.2 0.0 1.2 1 0 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 ORF2968 - 5e-22 77.8 0.1 9.3e-22 77.0 0.1 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain TruB-C_2 PF09157.11 ORF2968 - 1.1e-19 70.2 0.1 2.7e-19 69.0 0.1 1.7 1 0 0 1 1 1 1 Pseudouridine synthase II TruB, C-terminal SBF2 PF12335.8 ORF25536 - 0.083 12.5 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 Myotubularin protein FA_hydroxylase PF04116.13 ORF24056 - 1.2e-17 64.5 14.7 1.2e-17 64.5 14.7 2.0 2 0 0 2 2 2 1 Fatty acid hydroxylase superfamily CAP PF00188.26 ORF23724 - 4.5e-12 46.9 0.2 4.5e-12 46.9 0.2 2.1 2 0 0 2 2 2 1 Cysteine-rich secretory protein family PUB PF09409.10 ORF23724 - 7.3e-08 32.2 3.1 1.1e-06 28.4 3.1 2.6 1 1 0 1 1 1 1 PUB domain DUF2001 PF09393.10 ORF23724 - 0.016 15.2 0.7 0.032 14.2 0.7 1.5 1 0 0 1 1 1 0 Phage tail tube protein F5_F8_type_C PF00754.25 ORF19420 - 6.7e-13 48.9 0.0 9.4e-13 48.4 0.0 1.2 1 0 0 1 1 1 1 F5/8 type C domain DUF3402 PF11882.8 ORF17185 - 1.8e-19 70.2 0.1 1.3e-16 60.7 0.1 2.2 2 1 0 2 2 2 2 Domain of unknown function (DUF3402) Sacchrp_dh_NADP PF03435.18 ORF15314 - 6.8 7.0 7.0 1.1 9.5 0.4 2.7 2 1 1 3 3 3 0 Saccharopine dehydrogenase NADP binding domain Endonuc-BglII PF09195.11 ORF15314 - 8.2 6.2 10.9 9.7 6.0 2.4 3.0 2 1 1 3 3 3 0 Restriction endonuclease BglII Sacchrp_dh_NADP PF03435.18 ORF12998 - 6.8 7.0 7.0 1.1 9.5 0.4 2.7 2 1 1 3 3 3 0 Saccharopine dehydrogenase NADP binding domain Endonuc-BglII PF09195.11 ORF12998 - 8.2 6.2 10.9 9.7 6.0 2.4 3.0 2 1 1 3 3 3 0 Restriction endonuclease BglII ubiquitin PF00240.23 ORF12983 - 1e-14 54.0 0.0 1.7e-14 53.3 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF12983 - 0.00068 19.4 0.0 0.0014 18.5 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like SAM_3 PF18016.1 ORF12983 - 0.016 15.0 0.0 0.036 13.9 0.0 1.5 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Ubiquitin_2 PF14560.6 ORF12983 - 0.028 14.9 0.0 0.052 14.0 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-like domain SAM_PNT PF02198.16 ORF12983 - 0.035 14.1 0.0 0.082 12.9 0.0 1.6 1 1 0 1 1 1 0 Sterile alpha motif (SAM)/Pointed domain Metallophos PF00149.28 ORF110368 - 2.4e-31 109.8 0.1 3.8e-31 109.2 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF110368 - 0.03 14.8 0.4 0.056 13.9 0.4 1.4 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain zf-TAZ PF02135.16 ORF110368 - 0.031 14.7 1.6 0.031 14.7 1.6 1.7 2 0 0 2 2 2 0 TAZ zinc finger CTD_bind PF04818.13 ORF108603 - 6.7e-06 26.8 0.1 2.3e-05 25.1 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase II-binding domain. Pkinase PF00069.25 ORF104291 - 4.5e-55 186.9 1.1 1.3e-42 146.0 0.8 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF104291 - 1.7e-31 109.5 0.2 8e-27 94.1 0.4 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF104291 - 0.00012 21.1 0.2 0.00019 20.5 0.2 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF104291 - 0.062 12.7 0.1 0.062 12.7 0.1 1.7 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF104291 - 0.077 12.3 0.0 0.18 11.1 0.0 1.6 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF104291 - 0.078 12.9 0.0 0.25 11.2 0.0 1.7 2 0 0 2 2 2 0 Phosphotransferase enzyme family Big_11 PF18200.1 ORF104291 - 0.093 12.7 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial Ig-like domain Pkinase_fungal PF17667.1 ORF104291 - 0.11 11.2 0.1 0.11 11.2 0.1 2.0 1 1 1 2 2 2 0 Fungal protein kinase YqfQ PF14181.6 ORF104291 - 1.5 8.9 5.0 2.4 8.3 5.0 1.2 1 0 0 1 1 1 0 YqfQ-like protein 2OG-FeII_Oxy_3 PF13640.6 ORF10180 - 1.9e-15 57.5 0.0 3.4e-15 56.7 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF10180 - 3.8e-06 27.5 0.0 9.5e-06 26.2 0.0 1.7 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks47.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks47.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks47.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks47.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EamA PF00892.20 NODE_21437_length_939_cov_5.125000_g16504_i0forward_frame_1 - 0.00083 19.5 7.8 0.00083 19.5 7.8 2.2 2 0 0 2 2 2 1 EamA-like transporter family INTS2 PF14750.6 NODE_21406_length_940_cov_2.817680_g16476_i0reverse_frame_2 - 0.16 9.5 0.3 0.22 9.1 0.3 1.0 1 0 0 1 1 1 0 Integrator complex subunit 2 Topoisom_bac PF01131.20 NODE_21406_length_940_cov_2.817680_g16476_i0forward_frame_3 - 1.2e-67 228.7 0.0 1.4e-67 228.6 0.0 1.0 1 0 0 1 1 1 1 DNA topoisomerase ATP-grasp PF02222.22 NODE_21372_length_941_cov_2.811258_g16446_i0forward_frame_3 - 6.5e-45 152.8 0.0 1e-44 152.1 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 NODE_21372_length_941_cov_2.811258_g16446_i0forward_frame_3 - 1.4e-06 28.0 0.0 3.5e-06 26.7 0.0 1.7 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus CPSase_L_D2 PF02786.17 NODE_21372_length_941_cov_2.811258_g16446_i0forward_frame_3 - 1.5e-06 27.9 0.0 2.3e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain 2-Hacid_dh_C PF02826.19 NODE_21372_length_941_cov_2.811258_g16446_i0forward_frame_3 - 0.00034 20.0 0.0 0.00062 19.2 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.21 NODE_21372_length_941_cov_2.811258_g16446_i0forward_frame_3 - 0.00042 19.9 0.0 0.00063 19.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family ATP-grasp_3 PF02655.14 NODE_21372_length_941_cov_2.811258_g16446_i0forward_frame_3 - 0.00048 20.2 0.0 0.0013 18.8 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.6 NODE_21372_length_941_cov_2.811258_g16446_i0forward_frame_3 - 0.03 13.9 0.0 0.055 13.1 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain Pyr_redox PF00070.27 NODE_21372_length_941_cov_2.811258_g16446_i0forward_frame_3 - 0.098 13.2 0.4 1.3 9.6 0.1 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Glyco_hydro_47 PF01532.20 NODE_21360_length_941_cov_106.415011_g16434_i0reverse_frame_2 - 7.3e-51 173.5 0.0 9.9e-51 173.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 47 DEPP PF15343.6 NODE_21360_length_941_cov_106.415011_g16434_i0forward_frame_3 - 0.049 13.7 0.2 0.18 11.9 0.0 2.0 2 1 0 2 2 2 0 Decidual protein induced by progesterone family PQ-loop PF04193.14 NODE_21341_length_941_cov_274.078366_g16419_i0reverse_frame_3 - 7.4e-13 48.1 0.2 2.3e-12 46.5 0.2 2.0 1 0 0 1 1 1 1 PQ loop repeat YqzH PF14164.6 NODE_21341_length_941_cov_274.078366_g16419_i0reverse_frame_3 - 0.026 14.6 0.5 7.6 6.7 0.4 2.7 2 0 0 2 2 2 0 YqzH-like protein Hanta_nucleocap PF00846.18 NODE_21338_length_941_cov_307.288079_g16416_i0forward_frame_2 - 0.04 12.4 0.1 0.055 11.9 0.1 1.1 1 0 0 1 1 1 0 Hantavirus nucleocapsid protein Laminin_G_3 PF13385.6 NODE_21317_length_942_cov_111.496141_g16400_i0forward_frame_3 - 0.00013 22.2 0.0 0.00026 21.1 0.0 1.5 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Furin-like_2 PF15913.5 NODE_21317_length_942_cov_111.496141_g16400_i0forward_frame_3 - 0.014 15.5 6.3 0.014 15.5 6.3 2.4 1 1 0 2 2 2 0 Furin-like repeat, cysteine-rich VSP PF03302.13 NODE_21317_length_942_cov_111.496141_g16400_i0forward_frame_3 - 0.41 9.5 27.7 0.91 8.3 27.8 1.5 1 1 0 1 1 1 0 Giardia variant-specific surface protein Pkinase PF00069.25 ORF97200 - 3.2e-28 98.9 0.0 3.9e-28 98.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF97200 - 3.7e-18 65.7 0.0 4.7e-18 65.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF97200 - 2.2e-08 33.3 0.0 2.9e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF97200 - 3.4e-05 23.9 0.0 0.00037 20.5 0.0 2.2 2 0 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF97200 - 0.01 15.2 0.0 0.018 14.4 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family ADP_PFK_GK PF04587.15 ORF94223 - 3.1e-41 141.3 3.4 3.5e-41 141.2 3.4 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region CDC45 PF02724.14 ORF9187 - 6.5 4.9 22.2 8.6 4.5 22.2 1.2 1 0 0 1 1 1 0 CDC45-like protein Proteasome PF00227.26 ORF87808 - 9.3e-46 155.7 0.8 1.1e-45 155.5 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit adh_short PF00106.25 ORF87793 - 5.8e-30 104.2 0.0 7.6e-30 103.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF87793 - 1.1e-19 70.9 0.0 1.5e-19 70.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF87793 - 3e-05 24.0 0.1 5.9e-05 23.0 0.1 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF87793 - 0.0023 17.5 0.2 0.0037 16.9 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF87793 - 0.012 15.3 0.0 0.026 14.2 0.0 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 ORF87793 - 0.015 15.5 0.2 0.026 14.8 0.2 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF87793 - 0.022 14.5 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Polysacc_synt_2 PF02719.15 ORF87793 - 0.055 12.6 0.0 0.079 12.1 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 2-Hacid_dh_C PF02826.19 ORF87793 - 0.064 12.6 0.0 0.097 12.0 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 ORF87793 - 0.072 12.4 0.2 5.1 6.4 0.1 2.2 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF87793 - 0.1 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Bax1-I PF01027.20 ORF86449 - 1.8e-28 99.8 34.1 2.7e-28 99.2 34.1 1.3 1 1 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 ETF_alpha PF00766.19 ORF86174 - 3.6e-30 103.8 0.1 9.1e-30 102.5 0.1 1.7 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 ORF86174 - 5.4e-14 52.5 1.4 8.7e-14 51.8 1.4 1.4 1 0 0 1 1 1 1 Electron transfer flavoprotein domain baeRF_family10 PF18854.1 ORF86174 - 0.11 12.7 0.1 0.74 10.1 0.0 2.0 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 10 Zip PF02535.22 ORF81632 - 1.5e-30 106.6 7.9 2.2e-30 106.0 7.9 1.2 1 0 0 1 1 1 1 ZIP Zinc transporter RCC1_2 PF13540.6 ORF79668 - 6.3e-11 41.8 23.6 0.43 10.4 0.1 7.3 7 0 0 7 7 7 6 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF79668 - 0.00025 21.2 6.0 42 4.2 0.0 6.5 5 2 1 6 6 6 0 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 ORF79668 - 0.0011 19.4 0.0 20 5.8 0.0 5.1 6 0 0 6 6 6 1 Spectrin repeat GST_C_2 PF13410.6 ORF79668 - 0.062 13.3 0.4 12 6.1 0.3 4.1 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain UPF0231 PF06062.11 ORF79668 - 0.25 11.6 0.5 97 3.3 0.0 4.0 2 1 2 5 5 5 0 Uncharacterised protein family (UPF0231) Cerato-platanin PF07249.12 ORF79668 - 1.4 9.0 10.6 14 5.8 0.2 4.0 1 1 3 4 4 4 0 Cerato-platanin Phage_fiber_C PF06820.12 ORF79668 - 2.7 8.4 8.2 5.1 7.5 0.1 4.2 3 2 3 6 6 6 0 Putative prophage tail fibre C-terminus Lipocalin_7 PF14651.6 ORF79668 - 6.6 6.7 7.8 35 4.3 0.1 4.3 1 1 3 5 5 5 0 Lipocalin / cytosolic fatty-acid binding protein family Ctr PF04145.15 ORF77227 - 7.2e-08 33.2 5.9 7.2e-08 33.2 5.9 2.2 1 1 1 2 2 2 2 Ctr copper transporter family HMA PF00403.26 ORF77227 - 3.9e-07 30.4 0.2 7.4e-07 29.5 0.2 1.4 1 0 0 1 1 1 1 Heavy-metal-associated domain Peptidase_C1 PF00112.23 ORF76429 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Nop14 PF04147.12 ORF754 - 0.67 8.1 5.2 0.81 7.8 5.2 1.1 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 ORF75157 - 6.5 4.9 22.2 8.6 4.5 22.2 1.2 1 0 0 1 1 1 0 CDC45-like protein Peptidase_C1 PF00112.23 ORF74346 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Ank_4 PF13637.6 ORF69978 - 6.5e-08 33.0 0.3 1.5e-06 28.6 0.1 2.8 1 1 2 3 3 3 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF69978 - 2.4e-07 31.2 0.1 4.6e-07 30.3 0.1 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF69978 - 2.3e-06 27.8 1.4 0.11 13.0 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat CS PF04969.16 ORF69978 - 5.2e-06 27.4 0.3 1.7e-05 25.7 0.0 2.0 2 0 0 2 2 2 1 CS domain Ank_5 PF13857.6 ORF69978 - 5.7e-06 26.5 1.9 0.0011 19.2 0.4 2.8 3 1 1 4 4 4 2 Ankyrin repeats (many copies) Glyco_hydro_1 PF00232.18 ORF69978 - 0.02 13.3 0.0 0.23 9.8 0.0 2.0 1 1 1 2 2 2 0 Glycosyl hydrolase family 1 Ank_3 PF13606.6 ORF69978 - 0.066 13.8 0.8 39 5.3 0.0 3.8 4 0 0 4 4 4 0 Ankyrin repeat adh_short PF00106.25 ORF69829 - 5.8e-30 104.2 0.0 7.6e-30 103.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF69829 - 8e-20 71.4 0.0 1e-19 71.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF69829 - 2.7e-05 24.1 0.1 5.9e-05 23.0 0.1 1.5 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF69829 - 0.0023 17.5 0.2 0.0037 16.9 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF69829 - 0.012 15.2 0.0 0.028 14.1 0.0 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 ORF69829 - 0.016 15.5 0.2 0.026 14.8 0.2 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF69829 - 0.021 14.6 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Polysacc_synt_2 PF02719.15 ORF69829 - 0.052 12.7 0.0 0.079 12.1 0.0 1.3 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 2-Hacid_dh_C PF02826.19 ORF69829 - 0.056 12.8 0.0 0.084 12.2 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 ORF69829 - 0.072 12.4 0.2 5.1 6.4 0.1 2.2 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF69829 - 0.1 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MFS_1 PF07690.16 ORF69046 - 5.8e-16 58.4 3.9 5.8e-16 58.4 3.9 1.6 1 1 1 2 2 2 2 Major Facilitator Superfamily Tcp11 PF05794.13 ORF6807 - 0.017 14.2 0.9 0.027 13.5 0.9 1.3 1 1 0 1 1 1 0 T-complex protein 11 DUF501 PF04417.12 ORF6807 - 0.057 13.2 1.6 0.092 12.6 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF501) adh_short PF00106.25 ORF6792 - 1.1e-28 100.1 0.0 1.4e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF6792 - 7.8e-19 68.2 0.0 1e-18 67.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF6792 - 6e-05 23.0 0.1 0.00012 22.1 0.1 1.4 1 1 0 1 1 1 1 KR domain ApbA PF02558.16 ORF6792 - 0.0059 16.3 0.0 0.036 13.7 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 ORF6792 - 0.0088 15.6 0.2 0.014 15.0 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF6792 - 0.1 12.9 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ThiF PF00899.21 ORF6792 - 0.19 11.0 0.1 17 4.7 0.1 2.2 1 1 1 2 2 2 0 ThiF family Peptidase_C1 PF00112.23 ORF66228 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease LysM PF01476.20 ORF65359 - 0.00029 20.8 0.0 0.00067 19.7 0.0 1.7 1 0 0 1 1 1 1 LysM domain adh_short PF00106.25 ORF64728 - 8.3e-30 103.7 0.0 1.1e-29 103.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF64728 - 1.1e-19 71.0 0.0 1.4e-19 70.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF64728 - 5.3e-05 23.2 0.1 0.00011 22.2 0.1 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF64728 - 0.0023 17.6 0.2 0.0036 16.9 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF64728 - 0.012 15.2 0.0 0.028 14.1 0.0 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 ORF64728 - 0.022 15.0 0.1 0.039 14.2 0.1 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF64728 - 0.025 14.4 0.0 0.039 13.8 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type NAD_Gly3P_dh_N PF01210.23 ORF64728 - 0.074 13.0 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.19 ORF64728 - 0.081 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 ORF64728 - 0.09 12.1 0.2 6.3 6.1 0.1 2.2 1 1 1 2 2 2 0 ThiF family 3HCDH_N PF02737.18 ORF64728 - 0.18 11.7 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Dcc1 PF09724.9 ORF61040 - 5e-30 104.9 0.0 6.2e-30 104.6 0.0 1.1 1 0 0 1 1 1 1 Sister chromatid cohesion protein Dcc1 EB PF01683.18 ORF5912 - 0.23 11.8 21.0 0.15 12.4 6.5 3.3 3 1 0 3 3 3 0 EB module Peptidase_C1 PF00112.23 ORF5818 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Nop14 PF04147.12 ORF57270 - 0.67 8.1 5.2 0.81 7.8 5.2 1.1 1 0 0 1 1 1 0 Nop14-like family DDE_1 PF03184.19 ORF51597 - 1.9e-15 56.9 0.1 2.7e-15 56.5 0.1 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease RuBisCO_large_N PF02788.16 ORF51597 - 0.16 12.2 0.2 0.66 10.2 0.0 1.9 2 0 0 2 2 2 0 Ribulose bisphosphate carboxylase large chain, N-terminal domain Kelch_4 PF13418.6 ORF51253 - 1.7e-17 63.1 7.0 1.6e-06 28.0 0.4 3.7 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF51253 - 3.5e-16 58.9 2.1 1.1e-05 25.5 0.1 3.4 2 1 1 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF51253 - 3.6e-16 58.5 0.5 7e-06 25.5 0.1 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_3 PF13415.6 ORF51253 - 2.2e-14 53.3 0.6 9.6e-08 32.1 0.0 4.6 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF51253 - 7.4e-13 47.9 1.2 3.2e-06 26.9 0.1 4.1 4 1 0 4 4 4 3 Kelch motif Kelch_5 PF13854.6 ORF51253 - 3.5e-12 46.0 0.1 0.014 15.3 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Proteasome PF00227.26 ORF48976 - 9.3e-46 155.7 0.8 1.1e-45 155.5 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit Filament PF00038.21 ORF47860 - 0.025 14.2 26.7 0.027 14.1 5.1 2.2 2 0 0 2 2 2 0 Intermediate filament protein Peptidase_S46 PF10459.9 ORF47860 - 1.7 7.2 16.2 2.6 6.6 16.2 1.3 1 0 0 1 1 1 0 Peptidase S46 DUF4407 PF14362.6 ORF47860 - 3.3 7.0 33.9 5.9 6.1 32.1 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Peptidase_C1 PF00112.23 ORF4676 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease adh_short PF00106.25 ORF44807 - 3.7e-29 101.6 0.0 4.9e-29 101.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF44807 - 4.3e-20 72.3 0.0 5.7e-20 71.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF44807 - 7.2e-05 22.8 0.1 0.00014 21.8 0.1 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF44807 - 0.0016 18.1 0.3 0.0024 17.5 0.3 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF44807 - 0.0045 16.6 0.0 0.027 14.1 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 ORF44807 - 0.015 15.1 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type DUF3226 PF11536.8 ORF44807 - 0.021 14.5 0.4 0.028 14.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3226) Sacchrp_dh_NADP PF03435.18 ORF44807 - 0.074 13.3 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_Gly3P_dh_N PF01210.23 ORF44807 - 0.079 12.9 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF44807 - 0.091 12.1 0.3 9.4 5.5 0.0 2.2 1 1 1 2 2 2 0 ThiF family 2-Hacid_dh_C PF02826.19 ORF44807 - 0.099 12.0 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 ORF44807 - 0.13 11.3 0.0 0.18 10.9 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein ZZ PF00569.17 ORF44315 - 9.7e-27 92.5 34.9 2.3e-12 46.5 9.2 4.0 3 1 0 3 3 3 3 Zinc finger, ZZ type DDHD PF02862.17 ORF44315 - 0.066 13.4 0.1 0.078 13.1 0.1 1.2 1 0 0 1 1 1 0 DDHD domain DUF2828 PF11443.8 ORF44315 - 0.44 8.6 4.2 0.55 8.3 4.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) DUF4746 PF15928.5 ORF44315 - 1.7 8.0 6.5 2.2 7.6 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Presenilin PF01080.17 ORF44315 - 2.1 7.0 6.1 2.6 6.7 6.1 1.1 1 0 0 1 1 1 0 Presenilin RR_TM4-6 PF06459.12 ORF44315 - 8.9 6.0 10.0 12 5.6 10.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 NHL PF01436.21 ORF44162 - 1.3e-10 40.7 20.7 0.027 14.5 0.3 8.0 8 1 0 8 8 8 5 NHL repeat CDtoxinA PF03498.14 ORF44162 - 0.0068 16.0 0.1 0.47 10.0 0.0 2.4 2 0 0 2 2 2 1 Cytolethal distending toxin A/C domain Kunitz_BPTI PF00014.23 ORF44162 - 0.031 14.5 0.7 0.074 13.3 0.7 1.6 1 0 0 1 1 1 0 Kunitz/Bovine pancreatic trypsin inhibitor domain Laminin_G_3 PF13385.6 ORF44162 - 0.053 13.7 0.5 0.15 12.2 0.1 1.9 2 0 0 2 2 2 0 Concanavalin A-like lectin/glucanases superfamily Peptidase_C1 PF00112.23 ORF407 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease adh_short PF00106.25 ORF3971 - 1.3e-28 99.8 0.0 1.7e-28 99.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF3971 - 3.2e-19 69.4 0.0 4.2e-19 69.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF3971 - 0.00018 21.5 0.1 0.00038 20.4 0.1 1.5 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF3971 - 0.0021 17.6 0.2 0.0033 17.0 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF3971 - 0.0037 16.9 0.0 0.022 14.4 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 ORF3971 - 0.066 13.0 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Sacchrp_dh_NADP PF03435.18 ORF3971 - 0.091 13.0 0.1 0.18 12.1 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_Gly3P_dh_N PF01210.23 ORF3971 - 0.13 12.3 0.1 0.25 11.3 0.1 1.5 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF3971 - 0.21 10.9 0.1 17 4.6 0.1 2.2 1 1 1 2 2 2 0 ThiF family Peptidase_C1 PF00112.23 ORF37341 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease adh_short PF00106.25 ORF36826 - 1e-28 100.1 0.0 1.4e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF36826 - 6.9e-20 71.6 0.0 9e-20 71.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF36826 - 6.3e-05 23.0 0.1 0.00012 22.0 0.1 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF36826 - 0.00074 19.1 0.2 0.0011 18.5 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF36826 - 0.002 17.8 0.0 0.012 15.2 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 ORF36826 - 0.011 15.6 0.0 0.017 14.9 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type DUF1776 PF08643.10 ORF36826 - 0.037 13.4 0.1 0.063 12.6 0.1 1.3 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) NAD_Gly3P_dh_N PF01210.23 ORF36826 - 0.039 13.9 0.0 0.071 13.1 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF36826 - 0.046 13.1 0.3 4.6 6.5 0.0 2.2 1 1 1 2 2 2 0 ThiF family Sacchrp_dh_NADP PF03435.18 ORF36826 - 0.093 13.0 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Polysacc_synt_2 PF02719.15 ORF36826 - 0.1 11.7 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein LytR_C PF13399.6 ORF36826 - 0.14 13.1 0.0 0.27 12.3 0.0 1.4 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator Peptidase_C1 PF00112.23 ORF3577 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF34478 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease adh_short PF00106.25 ORF33592 - 6e-29 100.9 0.0 7.8e-29 100.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF33592 - 5e-20 72.1 0.0 6.5e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF33592 - 5.4e-05 23.2 0.0 0.00011 22.2 0.0 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF33592 - 0.0018 17.9 0.3 0.0028 17.2 0.3 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF33592 - 0.0041 16.8 0.0 0.024 14.3 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 ORF33592 - 0.013 15.3 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Sacchrp_dh_NADP PF03435.18 ORF33592 - 0.013 15.8 0.1 0.022 15.0 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF3226 PF11536.8 ORF33592 - 0.023 14.4 0.4 0.032 13.9 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3226) DUF1776 PF08643.10 ORF33592 - 0.024 14.0 0.4 0.043 13.2 0.4 1.4 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) 2-Hacid_dh_C PF02826.19 ORF33592 - 0.036 13.4 0.0 0.056 12.8 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 ORF33592 - 0.051 12.7 0.0 0.066 12.3 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein ThiF PF00899.21 ORF33592 - 0.07 12.5 0.3 5.3 6.3 0.1 2.2 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF33592 - 0.11 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Torus PF16131.5 ORF31123 - 1.5e-18 67.4 8.6 0.00032 21.4 0.0 4.2 4 0 0 4 4 4 4 Torus domain zf_CCCH_4 PF18345.1 ORF31123 - 6.6e-17 61.0 33.5 9.8e-06 25.5 3.5 4.4 4 0 0 4 4 4 4 Zinc finger domain zf-CCCH PF00642.24 ORF31123 - 3.1e-13 49.2 37.7 5.7e-07 29.3 2.1 4.6 5 0 0 5 5 5 4 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF31123 - 1.1e-12 47.4 24.7 2.3e-05 24.1 3.6 4.3 4 0 0 4 4 4 4 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF31123 - 1.7e-09 37.9 8.5 0.053 13.7 0.0 4.2 4 0 0 4 4 4 3 Zinc-finger containing family zf-CCCH_2 PF14608.6 ORF31123 - 1.9e-08 34.5 27.3 0.047 14.2 3.8 4.6 4 1 0 4 4 4 4 RNA-binding, Nab2-type zinc finger adh_short PF00106.25 ORF29799 - 1.2e-29 103.2 0.0 1.5e-29 102.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF29799 - 6.1e-20 71.8 0.0 7.7e-20 71.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF29799 - 8.4e-05 22.5 0.0 0.00017 21.5 0.0 1.5 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF29799 - 0.0022 17.6 0.2 0.0037 16.9 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF29799 - 0.011 15.3 0.0 0.028 14.0 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 ORF29799 - 0.016 15.5 0.2 0.026 14.8 0.2 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF29799 - 0.025 14.4 0.0 0.039 13.7 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Polysacc_synt_2 PF02719.15 ORF29799 - 0.055 12.6 0.0 0.08 12.1 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 2-Hacid_dh_C PF02826.19 ORF29799 - 0.057 12.8 0.0 0.084 12.2 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 ORF29799 - 0.072 12.4 0.2 5.1 6.4 0.1 2.2 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF29799 - 0.091 12.7 0.0 0.2 11.6 0.0 1.6 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DUF2989 PF11207.8 ORF28088 - 0.044 13.6 0.1 0.068 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2989) Peptidase_C1 PF00112.23 ORF26912 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF26567 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease adh_short PF00106.25 ORF26254 - 1.7e-28 99.4 0.0 2.3e-28 99.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF26254 - 5.7e-19 68.6 0.0 7.5e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF26254 - 6.9e-05 22.8 0.1 0.00014 21.8 0.1 1.4 1 1 0 1 1 1 1 KR domain ApbA PF02558.16 ORF26254 - 0.0026 17.4 0.0 0.016 14.9 0.0 2.2 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 ORF26254 - 0.0029 17.2 0.3 0.0045 16.6 0.3 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF26254 - 0.044 14.0 0.1 0.082 13.2 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF26254 - 0.055 13.3 0.0 0.088 12.6 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type ThiF PF00899.21 ORF26254 - 0.09 12.1 0.1 9.3 5.5 0.1 2.2 1 1 1 2 2 2 0 ThiF family 2-Hacid_dh_C PF02826.19 ORF26254 - 0.099 12.0 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Peptidase_C1 PF00112.23 ORF2597 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF22602 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF21682 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Nop14 PF04147.12 ORF21551 - 0.67 8.1 5.2 0.81 7.8 5.2 1.1 1 0 0 1 1 1 0 Nop14-like family Zeta_toxin PF06414.12 ORF18175 - 0.027 13.7 0.0 0.058 12.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 ORF18175 - 0.11 12.8 0.0 0.27 11.6 0.0 1.7 2 1 0 2 2 2 0 AAA ATPase domain Peptidase_C1 PF00112.23 ORF15974 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Amino_oxidase PF01593.24 ORF15383 - 2.7e-15 56.6 0.0 4.3e-14 52.7 0.0 2.0 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Pyr_redox_2 PF07992.14 ORF15383 - 0.00016 21.0 0.1 0.011 15.0 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF15383 - 0.00044 19.6 0.0 0.00062 19.1 0.0 1.2 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 ORF15383 - 0.00045 19.4 1.4 0.00074 18.7 0.4 1.7 2 0 0 2 2 2 1 Lycopene cyclase protein FAD_binding_2 PF00890.24 ORF15383 - 0.0014 17.8 0.6 0.053 12.6 0.1 2.1 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.19 ORF15383 - 0.0021 17.4 0.2 0.55 9.4 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_9 PF13454.6 ORF15383 - 0.0023 17.9 1.1 0.16 11.9 0.2 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF15383 - 0.0081 14.9 0.4 0.13 10.9 0.4 2.0 2 0 0 2 2 2 1 HI0933-like protein DAO PF01266.24 ORF15383 - 0.0084 15.7 10.9 0.27 10.8 10.8 2.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF15383 - 0.031 14.5 1.1 0.18 12.1 1.1 2.2 1 1 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DUF442 PF04273.13 ORF15383 - 0.039 14.0 0.1 0.074 13.1 0.1 1.4 1 0 0 1 1 1 0 Putative phosphatase (DUF442) AlaDh_PNT_C PF01262.21 ORF15383 - 0.089 12.1 0.1 0.15 11.3 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 ORF15383 - 0.094 13.3 0.1 21 5.8 0.1 2.7 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Nop14 PF04147.12 ORF14872 - 0.67 8.1 5.2 0.81 7.8 5.2 1.1 1 0 0 1 1 1 0 Nop14-like family Peptidase_C1 PF00112.23 ORF11811 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF109991 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF107698 - 9.3e-14 52.0 0.1 2.4e-13 50.7 0.1 1.6 1 1 0 1 1 1 1 Papain family cysteine protease Peptidase_C39_2 PF13529.6 ORF107698 - 0.0039 17.8 0.0 0.0065 17.0 0.0 1.4 1 0 0 1 1 1 1 Peptidase_C39 like family Peptidase_C1_2 PF03051.15 ORF107698 - 0.0055 15.5 0.0 0.0082 15.0 0.0 1.3 1 0 0 1 1 1 1 Peptidase C1-like family VWA PF00092.28 ORF106632 - 2.6e-05 24.5 0.0 4.1e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF106632 - 0.0013 19.4 0.0 0.0022 18.6 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 ORF106632 - 0.044 13.2 0.0 0.77 9.1 0.0 2.2 2 0 0 2 2 2 0 VWA domain containing CoxE-like protein DUF5310 PF17237.2 ORF106632 - 1.2 9.1 3.3 2.2 8.2 0.1 2.7 3 0 0 3 3 3 0 Family of unknown function (DUF5310) CDC45 PF02724.14 ORF106239 - 6.5 4.9 22.2 8.6 4.5 22.2 1.2 1 0 0 1 1 1 0 CDC45-like protein DUF2989 PF11207.8 ORF10511 - 0.044 13.6 0.1 0.068 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2989) Peptidase_C1 PF00112.23 ORF101756 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease UPF0183 PF03676.14 ORF100225 - 4.1e-52 177.8 0.0 1.8e-50 172.4 0.0 2.0 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0183) Nucleoside_tran PF01733.18 ORF100225 - 0.06 12.7 0.2 0.088 12.2 0.2 1.1 1 0 0 1 1 1 0 Nucleoside transporter HMG_box_2 PF09011.10 NODE_21620_length_934_cov_74.379310_g16654_i0reverse_frame_1 - 8.2e-12 45.5 6.0 3.1e-11 43.7 6.0 2.0 1 0 0 1 1 1 1 HMG-box domain HMG_box PF00505.19 NODE_21620_length_934_cov_74.379310_g16654_i0reverse_frame_1 - 4.4e-11 43.0 5.5 1.3e-10 41.5 5.5 1.9 1 0 0 1 1 1 1 HMG (high mobility group) box Stimulus_sens_1 PF13756.6 NODE_21620_length_934_cov_74.379310_g16654_i0reverse_frame_1 - 0.16 12.6 1.1 0.24 12.0 0.3 1.7 2 0 0 2 2 2 0 Stimulus-sensing domain NPAT_C PF15712.5 NODE_21617_length_934_cov_82.282536_g16651_i0forward_frame_1 - 0.59 8.7 8.2 0.78 8.3 8.2 1.1 1 0 0 1 1 1 0 NPAT C terminus zf-C2H2 PF00096.26 NODE_21517_length_936_cov_3582.133185_g16201_i1reverse_frame_1 - 7.5e-08 32.4 13.0 0.0014 19.0 0.9 4.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_21517_length_936_cov_3582.133185_g16201_i1reverse_frame_1 - 0.00042 20.9 10.7 0.0079 17.0 0.7 3.8 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_21517_length_936_cov_3582.133185_g16201_i1reverse_frame_1 - 0.054 14.0 0.1 0.054 14.0 0.1 3.7 3 0 0 3 3 3 0 Zinc-finger double domain zf-C2H2_8 PF15909.5 NODE_21517_length_936_cov_3582.133185_g16201_i1reverse_frame_1 - 0.83 10.0 6.1 2.6 8.4 2.5 2.4 1 1 1 2 2 2 0 C2H2-type zinc ribbon EamA PF00892.20 NODE_21437_length_939_cov_5.125000_g16504_i0forward_frame_2 - 0.021 15.0 6.0 0.046 13.9 6.0 1.6 1 0 0 1 1 1 0 EamA-like transporter family ABC2_membrane_3 PF12698.7 NODE_21433_length_939_cov_76.539823_g16501_i0forward_frame_2 - 1.1 8.3 4.2 1.5 7.8 4.2 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein UBA PF00627.31 ORF93907 - 2.7e-06 27.2 0.4 2.7e-06 27.2 0.4 1.9 2 0 0 2 2 2 1 UBA/TS-N domain Metallophos PF00149.28 ORF93907 - 3.3e-05 24.5 0.0 4.9e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Thioredoxin_7 PF13899.6 ORF93907 - 0.0086 16.2 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Hydrolase_4 PF12146.8 ORF93063 - 2.9e-05 23.5 0.0 0.17 11.1 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF93063 - 7e-05 22.6 0.2 0.066 12.8 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold EcKinase PF02958.20 ORF92266 - 1.2e-09 37.9 0.0 2.3e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 Ecdysteroid kinase APH PF01636.23 ORF92266 - 2.7e-08 34.0 0.4 3.8e-08 33.5 0.4 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family DUF1679 PF07914.11 ORF92266 - 6.6e-06 25.2 0.0 9.2e-06 24.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) Choline_kinase PF01633.20 ORF92266 - 0.011 15.4 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase p450 PF00067.22 ORF89628 - 1.1e-61 209.0 0.0 1.3e-61 208.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 FCD PF07729.12 ORF88459 - 0.37 11.2 4.0 0.43 11.0 0.7 2.2 2 0 0 2 2 2 0 FCD domain Zip PF02535.22 ORF87725 - 2.9e-31 108.9 11.8 6e-28 98.0 11.8 2.5 1 1 0 1 1 1 1 ZIP Zinc transporter S1 PF00575.23 ORF87663 - 2.1e-05 24.7 1.2 0.047 14.0 0.1 3.6 3 1 0 3 3 3 2 S1 RNA binding domain MRP-S35 PF10246.9 ORF87663 - 0.056 13.4 0.1 9.3 6.3 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal protein MRP-S35 DUF952 PF06108.12 ORF87663 - 0.12 12.3 0.0 15 5.6 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF952) Peripla_BP_1 PF00532.21 ORF8636 - 3.8e-29 102.0 0.0 4.8e-29 101.6 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 ORF8636 - 6.1e-23 82.0 0.0 2.5e-22 80.0 0.0 1.9 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 ORF8636 - 3.4e-12 46.5 0.0 4.4e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 ORF8636 - 9.2e-11 41.4 0.0 2e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family DUF2701 PF10857.8 ORF8636 - 0.21 11.7 0.0 0.34 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) PARP PF00644.20 ORF77169 - 1.2e-05 25.0 0.0 1.6e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Pkinase PF00069.25 ORF76121 - 1.9e-31 109.4 0.0 4.2e-31 108.3 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain EF-hand_1 PF00036.32 ORF76121 - 1.5e-29 99.3 12.9 2.6e-07 29.7 2.2 4.6 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF76121 - 6.6e-25 84.9 9.2 6.4e-06 25.7 0.2 4.8 5 0 0 5 5 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF76121 - 8.8e-24 83.7 10.6 4.3e-12 46.3 0.4 2.6 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF76121 - 2.1e-22 77.5 15.5 2.1e-06 26.9 0.1 4.7 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF76121 - 3.2e-19 68.5 13.4 2.1e-05 24.2 2.1 4.7 1 1 3 4 4 4 4 EF-hand domain pair Pkinase_Tyr PF07714.17 ORF76121 - 1.1e-08 34.7 0.0 2.6e-08 33.5 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase SPARC_Ca_bdg PF10591.9 ORF76121 - 3.7e-07 30.4 7.1 0.00021 21.6 0.7 2.5 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF76121 - 1.6e-05 25.2 0.4 0.0025 18.1 0.1 2.8 2 0 0 2 2 2 1 EF-hand domain EF-hand_4 PF12763.7 ORF76121 - 0.024 14.6 10.6 0.22 11.5 2.5 3.3 1 1 2 3 3 3 0 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF76121 - 0.047 13.6 4.7 0.11 12.4 0.2 3.1 3 1 0 3 3 3 0 EF hand HAUS-augmin3 PF14932.6 ORF76121 - 0.061 12.9 2.5 0.087 12.4 0.0 2.1 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 tRNA_synt_1c_R1 PF04558.15 ORF76121 - 0.064 13.3 1.5 0.57 10.2 0.2 2.6 1 1 3 4 4 4 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 EF-hand_11 PF08976.11 ORF76121 - 0.12 13.2 0.8 17 6.3 0.2 2.7 1 1 2 3 3 3 0 EF-hand domain HrpJ PF07201.11 ORF76121 - 0.45 10.8 4.1 5.5 7.3 1.1 2.7 2 1 1 3 3 3 0 HrpJ-like domain SRP54_N PF02881.19 ORF76121 - 0.64 10.3 5.1 6.4 7.1 0.4 3.4 3 0 0 3 3 3 0 SRP54-type protein, helical bundle domain Alpha_kinase PF02816.18 ORF71806 - 9.9e-34 117.1 0.9 1.7e-33 116.3 0.9 1.3 1 0 0 1 1 1 1 Alpha-kinase family Ribosomal_S7e PF01251.18 ORF71806 - 0.033 13.9 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S7e CTD_bind PF04818.13 ORF70523 - 6.6e-06 26.9 0.1 2.3e-05 25.1 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase II-binding domain. PilS PF08805.11 ORF67863 - 0.012 15.4 0.0 0.024 14.5 0.0 1.4 1 0 0 1 1 1 0 PilS N terminal Pkinase PF00069.25 ORF63540 - 9.7e-18 64.5 0.0 1.5e-17 63.8 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF63540 - 2.5e-07 29.8 0.1 2.5e-07 29.8 0.1 1.9 2 0 0 2 2 2 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF63540 - 1.2e-06 28.1 0.0 1.6e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF63540 - 0.00047 20.1 0.0 0.001 19.0 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF63540 - 0.022 13.7 0.1 0.042 12.8 0.1 1.4 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Kdo PF06293.14 ORF63540 - 0.047 13.0 0.3 0.084 12.2 0.3 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DinB PF05163.12 ORF63540 - 0.051 13.5 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 DinB family Methyltransf_11 PF08241.12 ORF62931 - 6e-10 39.6 0.0 8e-09 36.0 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF62931 - 1.3e-07 32.2 0.0 0.001 19.7 0.0 2.6 1 1 1 2 2 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 ORF62931 - 2e-06 27.8 0.0 3e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF62931 - 6.5e-06 25.7 0.0 0.00022 20.7 0.0 2.8 2 1 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF62931 - 0.0011 19.7 0.0 0.0055 17.4 0.0 2.2 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_8 PF05148.15 ORF62931 - 0.0033 17.3 0.0 0.012 15.5 0.0 1.8 2 0 0 2 2 2 1 Hypothetical methyltransferase Methyltransf_31 PF13847.6 ORF62931 - 0.018 14.9 0.0 0.4 10.5 0.0 2.3 2 0 0 2 2 2 0 Methyltransferase domain DUF494 PF04361.13 ORF60695 - 0.032 14.1 0.0 0.063 13.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF494) Peptidase_A22B PF04258.13 ORF59132 - 2.2e-73 247.2 13.5 2.6e-73 247.0 13.5 1.0 1 0 0 1 1 1 1 Signal peptide peptidase DUF4191 PF13829.6 ORF59132 - 0.039 13.3 2.5 0.57 9.5 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) DUF1077 PF06417.12 ORF59132 - 1.3 9.1 4.0 0.96 9.5 1.3 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1077) zinc_ribbon_2 PF13240.6 ORF59052 - 0.0011 18.6 2.2 0.0024 17.5 2.2 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF59052 - 0.0049 16.9 0.3 0.013 15.5 0.3 1.6 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF59052 - 0.0056 16.1 2.0 0.0056 16.1 2.0 1.9 2 0 0 2 2 2 1 zinc-ribbon domain DUF35_N PF12172.8 ORF59052 - 0.0058 16.5 3.1 0.022 14.7 3.1 2.0 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_15 PF17032.5 ORF59052 - 0.026 15.3 0.1 0.046 14.5 0.1 1.4 1 0 0 1 1 1 0 zinc-ribbon family TF_Zn_Ribbon PF08271.12 ORF59052 - 0.17 11.4 1.0 0.39 10.3 1.0 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding Pkinase PF00069.25 ORF58757 - 8e-62 209.0 0.2 1e-61 208.6 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58757 - 1.6e-27 96.4 0.0 2.3e-27 95.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF58757 - 1.7e-05 24.0 0.4 2.5e-05 23.4 0.4 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF58757 - 0.00039 19.8 0.0 0.00072 19.0 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF58757 - 0.0015 18.5 0.0 0.061 13.2 0.0 2.2 2 0 0 2 2 2 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF58757 - 0.0024 17.5 0.3 0.005 16.5 0.3 1.6 1 1 0 1 1 1 1 RIO1 family FTA2 PF13095.6 ORF58757 - 0.0046 16.6 0.1 0.013 15.2 0.1 1.8 1 1 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF58757 - 0.0057 16.0 0.0 0.039 13.3 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF58757 - 0.016 14.0 0.1 0.1 11.4 0.0 1.9 2 0 0 2 2 2 0 Fungal protein kinase YrbL-PhoP_reg PF10707.9 ORF58757 - 0.032 13.8 0.2 0.11 12.0 0.0 1.9 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Multi-haem_cyto PF13447.6 ORF58757 - 0.15 11.3 0.1 0.2 10.9 0.1 1.2 1 0 0 1 1 1 0 Seven times multi-haem cytochrome CxxCH Metallophos PF00149.28 ORF57876 - 9.8e-37 127.4 1.3 1.4e-36 126.9 1.3 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF57876 - 0.00031 21.1 0.1 0.00067 20.0 0.1 1.6 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Glyco_hydro_65N PF03636.15 ORF57876 - 0.071 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain DUF5378 PF17349.2 ORF57876 - 0.2 10.9 0.0 0.29 10.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5378) Helicase_C PF00271.31 ORF56954 - 1.6e-29 102.5 0.1 8.3e-29 100.2 0.0 2.1 2 1 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF56954 - 6.8e-18 65.0 0.0 3.2e-17 62.8 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 ORF56954 - 0.0039 16.4 0.0 0.0058 15.9 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase CMS1 PF14617.6 ORF56954 - 0.0041 16.5 0.1 0.0078 15.6 0.1 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit DUF5532 PF17673.1 ORF56954 - 0.18 11.9 0.0 0.43 10.7 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5532) CSRNP_N PF16019.5 ORF5579 - 2.6 7.9 6.9 1.1 9.1 0.0 2.4 1 1 2 3 3 3 0 Cysteine/serine-rich nuclear protein N-terminus Hamartin PF04388.12 ORF55634 - 8.3 4.9 7.6 7.8 5.0 6.3 1.4 1 1 0 1 1 1 0 Hamartin protein AlaDh_PNT_C PF01262.21 ORF53309 - 6.2e-35 120.4 0.3 9.6e-35 119.8 0.3 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain PNTB_4TM PF12769.7 ORF53309 - 1.1e-29 102.7 5.4 1.1e-29 102.7 5.4 2.2 2 0 0 2 2 2 1 4TM region of pyridine nucleotide transhydrogenase, mitoch LETM1 PF07766.13 ORF50876 - 0.023 14.1 0.7 0.11 11.8 0.8 1.8 2 0 0 2 2 2 0 LETM1-like protein YlbD_coat PF14071.6 ORF50876 - 5.1 7.4 9.1 16 5.7 2.3 2.9 2 1 1 3 3 3 0 Putative coat protein CSTF2_hinge PF14327.6 ORF50876 - 9.4 6.8 11.9 11 6.6 5.3 3.4 3 1 0 3 3 3 0 Hinge domain of cleavage stimulation factor subunit 2 Inj_translocase PF16928.5 ORF50876 - 9.6 5.6 14.4 5.8 6.3 4.9 3.5 2 1 1 3 3 3 0 DNA/protein translocase of phage P22 injectosome 3Beta_HSD PF01073.19 ORF42104 - 1.3e-22 80.1 0.0 1.6e-22 79.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 ORF42104 - 6.3e-10 38.6 0.0 9.5e-10 38.1 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein Epimerase PF01370.21 ORF42104 - 1.5e-08 34.4 0.0 2e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Hydrolase_4 PF12146.8 ORF39993 - 3e-05 23.4 0.0 0.0099 15.2 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF39993 - 0.0028 17.3 0.6 0.0091 15.7 0.6 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold LIP PF03583.14 ORF39993 - 0.11 11.7 0.0 0.2 10.9 0.0 1.3 1 0 0 1 1 1 0 Secretory lipase Bax1-I PF01027.20 ORF36946 - 3.2e-37 128.4 28.9 3.8e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF36946 - 1.9 9.3 17.3 2.7 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF36946 - 2.7 8.1 8.0 7.2 6.7 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) APOBEC_N PF08210.11 ORF36384 - 0.0048 16.8 0.0 0.0072 16.2 0.0 1.3 1 0 0 1 1 1 1 APOBEC-like N-terminal domain dCMP_cyt_deam_1 PF00383.23 ORF36384 - 0.0076 16.1 0.0 0.012 15.4 0.0 1.4 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Toxin-deaminase PF14424.6 ORF36384 - 0.023 14.8 0.0 0.037 14.1 0.0 1.3 1 0 0 1 1 1 0 The BURPS668_1122 family of deaminases SNAD4 PF18750.1 ORF36384 - 0.031 14.4 0.0 0.054 13.6 0.0 1.4 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC3 PF18771.1 ORF36384 - 0.062 13.4 0.0 0.39 10.8 0.0 2.0 2 0 0 2 2 2 0 APOBEC3 NAD1 PF18778.1 ORF36384 - 0.088 12.9 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 APOBEC2 PF18772.1 ORF36384 - 0.16 12.0 0.0 0.34 10.9 0.0 1.5 2 0 0 2 2 2 0 APOBEC2 zf-C2H2 PF00096.26 ORF34738 - 4.1e-15 55.3 17.6 7.3e-06 26.2 0.7 3.7 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF34738 - 5.6e-10 39.2 18.5 3.7e-08 33.4 0.3 4.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF34738 - 2.8e-09 37.0 15.4 0.004 17.9 0.4 3.9 3 0 0 3 3 3 3 C2H2-type zinc finger zf-BED PF02892.15 ORF34738 - 5.6e-05 23.1 14.8 0.0014 18.6 2.7 3.0 2 1 1 3 3 2 2 BED zinc finger zf-C2H2_11 PF16622.5 ORF34738 - 0.00024 20.8 2.8 0.05 13.4 0.2 2.8 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-Di19 PF05605.12 ORF34738 - 0.00039 20.7 2.1 0.00039 20.7 2.1 2.1 3 0 0 3 3 2 1 Drought induced 19 protein (Di19), zinc-binding Zn-ribbon_8 PF09723.10 ORF34738 - 0.052 13.7 1.2 0.16 12.1 0.1 2.3 1 1 1 2 2 2 0 Zinc ribbon domain zf-H2C2_5 PF13909.6 ORF34738 - 0.1 12.4 11.7 12 5.8 0.5 4.2 3 1 0 3 3 3 0 C2H2-type zinc-finger domain GAGA PF09237.11 ORF34738 - 0.11 12.3 0.8 4.5 7.2 0.0 3.0 1 1 2 3 3 3 0 GAGA factor zf-C2H2_8 PF15909.5 ORF34738 - 0.24 11.7 8.3 0.049 13.9 3.8 2.2 2 1 1 3 3 3 0 C2H2-type zinc ribbon zf-LYAR PF08790.11 ORF34738 - 0.24 11.3 6.9 2.3 8.2 0.1 3.9 4 0 0 4 4 4 0 LYAR-type C2HC zinc finger Rpr2 PF04032.16 ORF34738 - 0.26 11.6 6.5 12 6.2 6.5 3.2 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-RING_5 PF14634.6 ORF34738 - 0.46 10.5 7.0 4.3 7.4 2.8 3.2 2 1 1 3 3 3 0 zinc-RING finger domain zf-met PF12874.7 ORF34738 - 0.67 10.4 7.1 12 6.4 0.2 3.6 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zinc_ribbon_15 PF17032.5 ORF34738 - 2.2 9.1 11.9 0.1 13.4 1.6 3.1 3 1 1 4 4 4 0 zinc-ribbon family zf-CHY PF05495.12 ORF34738 - 2.9 8.4 8.4 4.6 7.8 5.7 2.7 2 1 0 2 2 2 0 CHY zinc finger FYVE PF01363.21 ORF34738 - 3 8.0 7.7 4.3 7.6 0.2 2.8 1 1 1 2 2 2 0 FYVE zinc finger TauD PF02668.16 ORF25403 - 1.9e-37 129.5 0.1 2.4e-37 129.2 0.1 1.1 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family EF-hand_1 PF00036.32 ORF24698 - 7.5e-14 50.2 0.0 0.013 15.1 0.0 4.8 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF24698 - 1.9e-12 46.0 0.1 0.067 13.2 0.1 5.4 5 0 0 5 5 5 4 EF-hand domain EF-hand_8 PF13833.6 ORF24698 - 1.4e-09 37.7 0.0 0.00022 21.0 0.0 4.4 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_7 PF13499.6 ORF24698 - 3.6e-09 36.9 0.0 0.0011 19.3 0.0 3.5 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF24698 - 1.4e-08 33.8 0.0 0.035 13.6 0.0 3.6 3 0 0 3 3 3 3 EF hand Ank_2 PF12796.7 ORF23962 - 4.7e-31 107.2 1.7 8.5e-10 39.1 0.2 3.6 3 1 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF23962 - 3.1e-23 81.5 6.5 1.4e-10 41.2 0.8 5.4 3 3 2 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF23962 - 1.3e-21 76.0 11.2 2.2e-05 24.7 0.8 7.2 7 0 0 7 7 7 6 Ankyrin repeat Ank_4 PF13637.6 ORF23962 - 7.2e-18 64.7 2.0 0.0002 21.8 0.1 5.0 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF23962 - 4.9e-14 51.1 2.4 0.023 15.2 0.0 7.3 7 1 0 7 7 7 4 Ankyrin repeat HNH_2 PF13391.6 ORF23801 - 0.076 13.2 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 HNH endonuclease Hydrolase_4 PF12146.8 ORF1930 - 3e-05 23.4 0.0 0.0099 15.2 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF1930 - 0.0031 17.2 0.8 0.0094 15.6 0.8 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold LIP PF03583.14 ORF1930 - 0.11 11.7 0.0 0.2 10.9 0.0 1.3 1 0 0 1 1 1 0 Secretory lipase DHHC PF01529.20 ORF1833 - 2.2e-31 108.7 6.0 2.2e-31 108.7 6.0 1.9 2 0 0 2 2 2 1 DHHC palmitoyltransferase Spt4 PF06093.13 ORF1833 - 0.19 11.8 2.3 0.45 10.7 2.3 1.6 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger LapA_dom PF06305.11 ORF1833 - 1.7 8.6 6.0 4.3 7.2 0.1 3.0 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain Meckelin PF09773.9 ORF13281 - 9.2e-68 229.1 1.7 1e-67 229.0 1.7 1.0 1 0 0 1 1 1 1 Meckelin (Transmembrane protein 67) NMN_transporter PF04973.12 ORF13281 - 0.014 15.3 0.6 0.021 14.8 0.6 1.2 1 0 0 1 1 1 0 Nicotinamide mononucleotide transporter MmgE_PrpD PF03972.14 ORF13115 - 9.2e-20 70.6 0.0 4.6e-19 68.3 0.0 1.8 1 1 0 1 1 1 1 MmgE/PrpD family Voltage_CLC PF00654.20 ORF111051 - 1.9e-08 34.0 9.2 2.4e-08 33.6 9.2 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel CBS PF00571.28 ORF111051 - 0.0075 16.7 0.0 5.5 7.5 0.0 2.4 2 0 0 2 2 2 2 CBS domain Toprim_N PF08275.11 ORF111051 - 0.053 13.6 0.0 0.094 12.8 0.0 1.3 1 0 0 1 1 1 0 DNA primase catalytic core, N-terminal domain Kelch_4 PF13418.6 ORF107926 - 1.5e-31 108.1 14.0 8.9e-10 38.4 0.0 5.7 5 1 0 5 5 5 5 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF107926 - 3.8e-26 90.6 2.0 8.2e-06 25.7 0.2 5.5 5 1 0 5 5 5 5 Kelch motif Kelch_6 PF13964.6 ORF107926 - 2.2e-25 88.1 6.7 5.3e-07 29.7 0.1 5.3 5 0 0 5 5 5 5 Kelch motif Kelch_1 PF01344.25 ORF107926 - 6.7e-24 83.2 4.8 1.4e-09 37.4 0.3 4.6 4 0 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 ORF107926 - 9.8e-24 82.4 6.4 1.7e-07 30.9 0.1 5.4 5 0 0 5 5 5 4 Kelch motif Kelch_3 PF13415.6 ORF107926 - 8.3e-23 80.2 8.1 1.8e-07 31.2 0.0 5.9 6 0 0 6 6 6 5 Galactose oxidase, central domain Period_C PF12114.8 ORF107926 - 0.018 14.7 0.0 0.031 13.8 0.0 1.4 1 0 0 1 1 1 0 Period protein 2/3C-terminal region DUF4091 PF13320.6 ORF107926 - 0.084 13.0 0.1 4.9 7.4 0.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4091) zinc_ribbon_2 PF13240.6 ORF106640 - 0.0011 18.6 2.2 0.0024 17.5 2.2 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF106640 - 0.0049 16.9 0.3 0.013 15.5 0.3 1.6 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF106640 - 0.0056 16.1 2.0 0.0056 16.1 2.0 1.9 2 0 0 2 2 2 1 zinc-ribbon domain DUF35_N PF12172.8 ORF106640 - 0.0058 16.5 3.1 0.022 14.7 3.1 2.0 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_15 PF17032.5 ORF106640 - 0.026 15.3 0.1 0.046 14.5 0.1 1.4 1 0 0 1 1 1 0 zinc-ribbon family TF_Zn_Ribbon PF08271.12 ORF106640 - 0.17 11.4 1.0 0.39 10.3 1.0 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding ATG16 PF08614.11 ORF104717 - 0.0016 18.7 6.1 0.0016 18.7 6.1 3.0 3 0 0 3 3 3 2 Autophagy protein 16 (ATG16) ERM PF00769.19 ORF104717 - 0.017 15.0 19.2 0.096 12.5 19.2 1.9 1 1 1 2 2 2 0 Ezrin/radixin/moesin family GAS2 PF02187.17 ORF104717 - 0.029 14.5 0.0 0.063 13.4 0.0 1.6 1 0 0 1 1 1 0 Growth-Arrest-Specific Protein 2 Domain TolA_bind_tri PF16331.5 ORF104717 - 0.13 12.3 11.7 1.3 9.2 3.1 3.6 2 1 1 3 3 3 0 TolA binding protein trimerisation Wtap PF17098.5 ORF104717 - 0.36 10.8 11.7 4.1 7.3 11.7 2.5 1 1 0 1 1 1 0 WTAP/Mum2p family Spc7 PF08317.11 ORF104717 - 3.1 6.6 22.6 0.9 8.4 17.3 2.4 2 1 0 2 2 2 0 Spc7 kinetochore protein DUF4200 PF13863.6 ORF104717 - 3.3 8.1 23.1 0.041 14.3 6.9 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) HAUS6_N PF14661.6 ORF104717 - 4.4 6.8 10.7 2.3 7.7 6.2 2.4 2 1 0 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus DUF1192 PF06698.11 ORF104717 - 6.3 6.9 11.8 0.72 10.0 0.7 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1192) Tropomyosin_1 PF12718.7 ORF104717 - 7.2 6.8 26.4 0.19 11.9 5.6 2.8 2 1 1 3 3 3 0 Tropomyosin like Amidase PF01425.21 ORF104655 - 7.4e-23 81.2 0.0 8.4e-23 81.0 0.0 1.0 1 0 0 1 1 1 1 Amidase UPF0180 PF03698.13 ORF104655 - 0.11 12.7 0.1 0.54 10.5 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) SHIPPO-rpt PF07004.12 ORF101812 - 9.3e-10 39.0 23.4 0.73 10.8 0.0 7.5 7 0 0 7 7 7 6 Sperm-tail PG-rich repeat zf-C2H2 PF00096.26 NODE_21622_length_933_cov_3594.100223_g16201_i2reverse_frame_1 - 7.3e-08 32.5 13.0 0.0014 19.0 0.9 4.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_21622_length_933_cov_3594.100223_g16201_i2reverse_frame_1 - 0.00041 20.9 10.7 0.0078 17.0 0.7 3.8 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_21622_length_933_cov_3594.100223_g16201_i2reverse_frame_1 - 0.054 14.0 0.1 0.054 14.0 0.1 3.7 3 0 0 3 3 3 0 Zinc-finger double domain zf-C2H2_8 PF15909.5 NODE_21622_length_933_cov_3594.100223_g16201_i2reverse_frame_1 - 0.81 10.0 6.1 2.6 8.4 2.5 2.4 1 1 1 2 2 2 0 C2H2-type zinc ribbon HMG_box PF00505.19 NODE_21620_length_934_cov_74.379310_g16654_i0reverse_frame_2 - 2e-18 66.5 0.6 4.1e-18 65.6 0.6 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_21620_length_934_cov_74.379310_g16654_i0reverse_frame_2 - 8e-11 42.4 0.8 1.8e-10 41.2 0.8 1.6 1 0 0 1 1 1 1 HMG-box domain CHDNT PF08073.12 NODE_21620_length_934_cov_74.379310_g16654_i0reverse_frame_2 - 0.021 14.8 0.1 0.058 13.4 0.1 1.7 1 0 0 1 1 1 0 CHDNT (NUC034) domain KRAB PF01352.27 NODE_21620_length_934_cov_74.379310_g16654_i0reverse_frame_2 - 0.12 12.1 0.0 0.35 10.5 0.0 1.8 1 0 0 1 1 1 0 KRAB box Mito_carr PF00153.27 ORF99580 - 9.6e-35 118.4 3.7 2.2e-14 53.1 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein Patatin PF01734.22 ORF99504 - 4.6e-24 85.7 0.0 7.6e-24 85.0 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase Metallophos PF00149.28 ORF99201 - 6.7e-36 124.7 0.1 1.1e-35 124.0 0.1 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Glyco_hydro_65N PF03636.15 ORF99201 - 0.011 15.4 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain STPPase_N PF16891.5 ORF99201 - 0.087 13.3 0.2 0.2 12.1 0.2 1.6 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain DUF5378 PF17349.2 ORF99201 - 0.096 12.0 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5378) Thi4 PF01946.17 ORF94675 - 1.8e-104 348.1 0.6 2.1e-104 347.9 0.6 1.0 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 ORF94675 - 5.5e-10 39.3 1.9 3.6e-08 33.4 0.2 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF94675 - 4.8e-08 32.6 0.4 1.7e-07 30.8 0.4 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF94675 - 1.1e-07 31.9 0.1 2.6e-07 30.7 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 ORF94675 - 1.5e-07 30.9 0.4 2.7e-05 23.4 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_9 PF13454.6 ORF94675 - 3.5e-05 23.8 2.2 0.0015 18.6 0.0 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF94675 - 0.00016 20.5 0.7 0.0026 16.5 0.1 2.6 3 0 0 3 3 3 1 HI0933-like protein FAD_oxidored PF12831.7 ORF94675 - 0.00018 21.0 0.1 0.00018 21.0 0.1 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF94675 - 0.00093 18.5 0.0 0.0019 17.5 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 ORF94675 - 0.0013 17.9 1.5 0.0022 17.1 0.2 1.9 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 ORF94675 - 0.0015 17.9 0.4 0.0046 16.3 0.3 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF94675 - 0.03 13.5 0.0 0.47 9.5 0.0 2.1 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) GMC_oxred_N PF00732.19 ORF94675 - 0.038 13.4 0.1 1 8.7 0.0 2.2 2 0 0 2 2 2 0 GMC oxidoreductase GIDA PF01134.22 ORF94675 - 0.066 12.3 1.3 0.19 10.8 0.2 2.0 2 1 0 2 2 2 0 Glucose inhibited division protein A DUF4820 PF16091.5 ORF93110 - 1.7 8.0 6.4 2.4 7.5 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) YqfQ PF14181.6 ORF93110 - 6.1 7.0 7.3 9.2 6.4 7.3 1.3 1 0 0 1 1 1 0 YqfQ-like protein Lung_7-TM_R PF06814.13 ORF9151 - 8.3e-13 48.2 11.9 9.7e-13 48.0 11.9 1.0 1 0 0 1 1 1 1 Lung seven transmembrane receptor GpcrRhopsn4 PF10192.9 ORF9151 - 1.1e-08 34.8 10.9 2.1e-08 33.9 10.9 1.6 1 1 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain DUF5493 PF17597.2 ORF9151 - 0.78 10.0 5.7 6.6 7.1 0.3 2.8 2 1 0 2 2 2 0 Family of unknown function (DUF5493) zf-RING_2 PF13639.6 ORF90634 - 8.6e-09 35.6 11.1 1.1e-07 32.0 7.0 2.3 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF90634 - 2.1e-08 34.3 6.1 2.1e-08 34.3 6.1 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain Zn_ribbon_17 PF17120.5 ORF90634 - 6.9e-05 22.4 5.2 6.9e-05 22.4 5.2 2.2 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF90634 - 0.00013 21.6 6.0 0.038 13.7 2.7 2.7 2 0 0 2 2 2 2 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF90634 - 0.00026 20.8 13.5 0.00039 20.2 8.6 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF90634 - 0.00033 20.8 6.2 0.0092 16.1 3.4 2.6 2 0 0 2 2 2 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 ORF90634 - 0.00084 19.2 11.4 0.0031 17.3 7.8 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF90634 - 0.0028 17.7 1.9 0.0028 17.7 1.9 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF90634 - 0.0058 16.6 5.4 0.0058 16.6 5.4 2.4 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF90634 - 0.0061 16.4 6.0 0.0061 16.4 6.0 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) CTU2 PF10288.9 ORF90634 - 0.0088 16.3 0.9 0.0088 16.3 0.9 2.3 1 1 1 2 2 2 1 Cytoplasmic tRNA 2-thiolation protein 2 Prok-RING_4 PF14447.6 ORF90634 - 0.021 14.7 3.2 0.021 14.7 3.2 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zinc_ribbon_16 PF17034.5 ORF90634 - 0.034 14.4 5.3 0.034 14.3 1.1 2.3 2 0 0 2 2 2 0 Zinc-ribbon like family zf-RING_UBOX PF13445.6 ORF90634 - 0.04 13.9 5.2 0.043 13.9 2.2 2.3 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_6 PF14835.6 ORF90634 - 0.2 11.5 2.4 0.43 10.5 2.4 1.5 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Ribosomal_60s PF00428.19 ORF90634 - 0.33 11.5 0.2 0.33 11.5 0.2 2.2 2 0 0 2 2 2 0 60s Acidic ribosomal protein Tmpp129 PF10272.9 ORF90634 - 0.8 8.9 10.2 0.61 9.3 0.7 2.7 2 1 1 3 3 3 0 Putative transmembrane protein precursor zf-C3H2C3 PF17122.5 ORF90634 - 3.4 7.8 9.9 0.43 10.7 4.1 2.3 2 0 0 2 2 2 0 Zinc-finger Patatin PF01734.22 ORF84621 - 4.6e-24 85.7 0.0 7.6e-24 85.0 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase Mak16 PF04874.14 ORF83263 - 0.56 10.8 1.8 1.6 9.4 1.7 1.7 1 1 0 1 1 1 0 Mak16 protein C-terminal region LON_substr_bdg PF02190.16 ORF82361 - 0.0016 18.3 0.3 0.0032 17.4 0.0 1.6 2 0 0 2 2 2 1 ATP-dependent protease La (LON) substrate-binding domain RCC1 PF00415.18 ORF80411 - 3.4e-24 85.2 7.4 2.2e-09 37.8 0.0 5.4 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF80411 - 7.5e-17 60.7 28.6 9.8e-08 31.6 0.7 5.6 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat EF-hand_1 PF00036.32 ORF77805 - 2.4e-07 29.8 0.3 5.9e-05 22.3 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF77805 - 3.3e-07 30.7 0.3 0.0002 21.7 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF77805 - 3.8e-06 26.4 0.5 0.0031 17.3 0.0 3.5 3 0 0 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF77805 - 2.7e-05 23.9 0.2 0.0024 17.7 0.0 3.0 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF77805 - 0.00031 20.1 0.4 0.002 17.5 0.1 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF77805 - 0.014 15.3 0.2 0.32 11.0 0.0 2.6 3 0 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand Helicase_C PF00271.31 ORF76638 - 4.5e-27 94.6 0.0 1.2e-26 93.2 0.0 1.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF76638 - 7.4e-17 61.7 0.0 1.5e-16 60.7 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase CMS1 PF14617.6 ORF76638 - 0.0014 18.0 1.3 0.025 13.9 0.0 2.7 3 0 0 3 3 3 1 U3-containing 90S pre-ribosomal complex subunit Baculo_p47 PF05112.12 ORF76638 - 0.041 13.5 0.0 0.057 13.0 0.0 1.2 1 0 0 1 1 1 0 Baculovirus P47 protein Rhodanese PF00581.20 ORF76638 - 0.068 13.7 0.0 0.13 12.8 0.0 1.5 1 0 0 1 1 1 0 Rhodanese-like domain Ion_trans PF00520.31 ORF7474 - 9.2e-12 44.7 8.8 5.4e-10 38.9 8.8 2.0 1 1 0 1 1 1 1 Ion transport protein Med15 PF09606.10 ORF7474 - 0.12 11.1 0.0 0.16 10.6 0.0 1.1 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal PKD_channel PF08016.12 ORF7474 - 0.4 9.3 0.0 0.4 9.3 0.0 2.2 3 0 0 3 3 3 0 Polycystin cation channel NHL PF01436.21 ORF7369 - 0.0016 18.4 0.5 1.8 8.7 0.1 3.2 3 0 0 3 3 3 2 NHL repeat Thi4 PF01946.17 ORF70908 - 1.8e-104 348.1 0.6 2.1e-104 347.9 0.6 1.0 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 ORF70908 - 5.5e-10 39.3 1.9 3.6e-08 33.4 0.2 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF70908 - 4.8e-08 32.6 0.4 1.7e-07 30.8 0.4 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF70908 - 1.1e-07 31.9 0.1 2.6e-07 30.7 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 ORF70908 - 1.5e-07 30.9 0.4 2.7e-05 23.4 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_9 PF13454.6 ORF70908 - 3.5e-05 23.8 2.2 0.0015 18.6 0.0 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF70908 - 0.00016 20.5 0.7 0.0026 16.5 0.1 2.6 3 0 0 3 3 3 1 HI0933-like protein FAD_oxidored PF12831.7 ORF70908 - 0.00018 21.0 0.1 0.00018 21.0 0.1 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF70908 - 0.00093 18.5 0.0 0.0019 17.5 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 ORF70908 - 0.0013 17.9 1.5 0.0022 17.1 0.2 1.9 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 ORF70908 - 0.0015 17.9 0.4 0.0046 16.3 0.3 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF70908 - 0.03 13.5 0.0 0.47 9.5 0.0 2.1 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) GMC_oxred_N PF00732.19 ORF70908 - 0.038 13.4 0.1 1 8.7 0.0 2.2 2 0 0 2 2 2 0 GMC oxidoreductase GIDA PF01134.22 ORF70908 - 0.066 12.3 1.3 0.19 10.8 0.2 2.0 2 1 0 2 2 2 0 Glucose inhibited division protein A TctC PF03401.14 ORF6967 - 0.024 13.7 0.1 0.04 13.0 0.1 1.2 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter family receptor DUF1319 PF07028.11 ORF6967 - 0.035 14.3 1.1 0.13 12.5 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1319) Prefoldin PF02996.17 ORF6967 - 0.062 13.2 3.4 0.14 12.1 3.4 1.5 1 0 0 1 1 1 0 Prefoldin subunit DUF1465 PF07323.12 ORF6967 - 0.075 12.9 3.1 0.095 12.5 1.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1465) SKA2 PF16740.5 ORF6967 - 0.092 12.5 4.0 0.25 11.1 4.0 1.7 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 DUF5320 PF17253.2 ORF6967 - 0.11 13.5 0.2 1.3 10.2 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5320) HALZ PF02183.18 ORF6967 - 0.84 9.9 3.0 0.93 9.8 1.5 1.8 2 0 0 2 2 2 0 Homeobox associated leucine zipper UPF0242 PF06785.11 ORF6967 - 1.1 9.4 7.3 0.3 11.2 4.1 1.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF4820 PF16091.5 ORF670 - 1.7 8.0 6.4 2.4 7.5 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) YqfQ PF14181.6 ORF670 - 6.1 7.0 7.3 9.2 6.4 7.3 1.3 1 0 0 1 1 1 0 YqfQ-like protein MucB_RseB PF03888.14 ORF665 - 1.4e-61 207.1 0.0 1.8e-61 206.8 0.0 1.1 1 0 0 1 1 1 1 MucB/RseB N-terminal domain MucB_RseB_C PF17188.4 ORF665 - 2.3e-29 101.5 0.0 3.8e-29 100.7 0.0 1.4 1 0 0 1 1 1 1 MucB/RseB C-terminal domain LolA_like PF17131.4 ORF665 - 0.00015 21.6 0.0 0.00024 20.9 0.0 1.2 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein Methyltransf_25 PF13649.6 ORF64179 - 3.1e-15 56.7 0.1 1.3e-14 54.6 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF64179 - 1.1e-14 54.8 0.4 1.5e-13 51.2 0.0 2.5 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF64179 - 1.3e-11 45.1 0.0 2.8e-11 44.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF64179 - 4.1e-10 39.6 0.0 6.8e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF64179 - 2.3e-09 37.3 0.0 3.3e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF64179 - 7.4e-05 22.2 0.0 0.00013 21.4 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family NodS PF05401.11 ORF64179 - 0.00028 20.6 0.0 0.00051 19.7 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_PK PF05891.12 ORF64179 - 0.0017 17.9 0.0 0.0068 16.0 0.0 1.8 1 1 0 2 2 2 1 AdoMet dependent proline di-methyltransferase CMAS PF02353.20 ORF64179 - 0.0028 17.0 0.0 0.0037 16.6 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_33 PF10017.9 ORF64179 - 0.014 14.5 0.1 0.58 9.3 0.1 2.1 1 1 1 2 2 2 0 Histidine-specific methyltransferase, SAM-dependent DREV PF05219.12 ORF64179 - 0.054 12.6 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase MTS PF05175.14 ORF64179 - 0.084 12.4 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain MbeD_MobD PF04899.12 ORF64179 - 0.095 12.8 0.6 0.23 11.6 0.6 1.6 1 0 0 1 1 1 0 MbeD/MobD like Methyltransf_18 PF12847.7 ORF64179 - 0.14 12.1 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain UVR PF02151.19 ORF62405 - 4.4e-05 23.1 7.7 8.1e-05 22.2 3.2 2.4 2 0 0 2 2 2 1 UvrB/uvrC motif SHNi-TPR PF10516.9 ORF62405 - 0.058 12.9 0.2 0.13 11.7 0.2 1.7 1 0 0 1 1 1 0 SHNi-TPR T6PP_N PF18572.1 ORF62405 - 0.066 13.1 1.9 0.18 11.6 1.7 1.8 1 1 0 1 1 1 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain Acetyltransf_10 PF13673.7 ORF62405 - 0.14 12.1 0.0 0.41 10.6 0.0 1.7 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain EF-hand_1 PF00036.32 ORF60710 - 2.4e-07 29.8 0.3 5.9e-05 22.3 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF60710 - 3.3e-07 30.7 0.3 0.0002 21.7 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF60710 - 3.8e-06 26.4 0.5 0.0031 17.3 0.0 3.5 3 0 0 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF60710 - 2.7e-05 23.9 0.2 0.0024 17.7 0.0 3.0 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF60710 - 0.00031 20.1 0.4 0.002 17.5 0.1 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF60710 - 0.014 15.3 0.2 0.32 11.0 0.0 2.6 3 0 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand Mak16 PF04874.14 ORF60288 - 0.56 10.8 1.8 1.6 9.4 1.7 1.7 1 1 0 1 1 1 0 Mak16 protein C-terminal region LysR_substrate PF03466.20 ORF59288 - 5.5e-30 104.3 0.0 7.7e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF59288 - 2e-20 72.5 0.6 3.3e-20 71.8 0.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 ORF59288 - 0.001 18.8 0.0 0.0021 17.8 0.0 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_24 PF13412.6 ORF59288 - 0.0015 18.1 0.0 0.0034 16.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 ORF59288 - 0.046 13.6 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_5 PF01022.20 ORF59288 - 0.058 13.3 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 ORF59288 - 0.093 12.8 0.1 0.22 11.6 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 ORF59288 - 0.093 12.6 0.1 0.24 11.3 0.1 1.6 1 0 0 1 1 1 0 MarR family QRPTase_C PF01729.19 ORF548 - 3.9e-63 212.2 0.1 5.1e-63 211.9 0.1 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 ORF548 - 1.7e-25 88.9 0.0 9.9e-25 86.4 0.0 2.1 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain IMPDH PF00478.25 ORF548 - 0.0003 19.9 0.1 0.00033 19.7 0.1 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain PEP_mutase PF13714.6 ORF548 - 0.011 15.2 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase Ribul_P_3_epim PF00834.19 ORF548 - 0.049 13.0 0.1 0.11 11.8 0.1 1.6 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family NIBRIN_BRCT_II PF16508.5 ORF548 - 0.063 13.6 0.0 6.9 7.0 0.0 2.4 2 0 0 2 2 2 0 Second BRCT domain on Nijmegen syndrome breakage protein IGPS PF00218.21 ORF548 - 0.075 12.2 0.9 0.15 11.2 0.9 1.5 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase Biotin_lipoyl PF00364.22 ORF548 - 0.1 12.5 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Biotin-requiring enzyme SfsA PF03749.13 ORF548 - 0.14 12.0 0.0 0.44 10.5 0.0 1.9 1 1 0 1 1 1 0 Sugar fermentation stimulation protein RE domain TPR_1 PF00515.28 ORF50954 - 3.6e-17 61.4 5.6 2.5e-07 30.2 0.2 3.8 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF50954 - 1.1e-15 56.4 3.2 6.7e-08 32.1 0.6 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF50954 - 3.4e-10 39.3 0.3 4.5e-05 23.3 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF50954 - 7.1e-07 29.5 3.5 0.0025 18.5 1.0 3.9 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF50954 - 9.9e-06 25.9 2.6 0.026 15.1 0.3 3.9 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF50954 - 1.5e-05 24.7 0.8 0.42 10.8 0.2 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF50954 - 9.3e-05 22.6 1.5 9.3e-05 22.6 1.5 2.8 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF50954 - 0.011 15.9 0.1 0.011 15.9 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Uteroglobin PF01099.17 ORF50954 - 0.036 14.4 2.8 1.2 9.5 0.7 2.4 2 0 0 2 2 2 0 Uteroglobin family TPR_19 PF14559.6 ORF50954 - 0.038 14.5 5.8 1.6 9.3 0.6 3.5 2 1 2 4 4 4 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF50954 - 0.045 14.0 0.7 0.095 12.9 0.7 1.7 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF50954 - 0.052 14.2 0.7 0.052 14.2 0.7 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF50954 - 0.066 13.6 0.1 16 6.1 0.0 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat ABC_tran PF00005.27 ORF50909 - 1.4e-19 71.0 3.3 1.4e-19 71.0 3.3 2.4 2 1 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF50909 - 6.1e-07 29.1 1.9 1.9e-05 24.2 1.9 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF50909 - 0.0016 18.1 0.1 0.0034 17.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATPase_2 PF01637.18 ORF50909 - 0.002 18.1 0.2 0.002 18.1 0.2 2.2 2 1 1 3 3 3 1 ATPase domain predominantly from Archaea AAA_11 PF13086.6 ORF50909 - 0.011 15.5 1.7 0.39 10.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 ORF50909 - 0.012 15.6 0.1 0.065 13.3 0.0 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_22 PF13401.6 ORF50909 - 0.017 15.4 0.2 1 9.6 0.0 2.5 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF50909 - 0.027 14.8 0.2 0.13 12.7 0.0 2.0 2 1 1 3 3 3 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF50909 - 0.037 14.0 1.0 0.088 12.7 0.1 1.9 2 0 0 2 2 2 0 RsgA GTPase Dynamin_N PF00350.23 ORF50909 - 0.04 14.0 1.2 0.04 14.0 1.2 2.2 2 1 0 2 2 2 0 Dynamin family Nup96 PF12110.8 ORF48243 - 3.8e-19 68.9 0.1 6e-19 68.3 0.1 1.3 1 0 0 1 1 1 1 Nuclear protein 96 HTH_54 PF18607.1 ORF47799 - 0.096 12.8 2.2 6.2 7.0 0.0 3.0 2 2 0 2 2 2 0 ParA helix turn helix domain DUF2120 PF09893.9 ORF47799 - 8.3 6.5 9.3 11 6.2 2.8 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) Amino_oxidase PF01593.24 ORF4734 - 1.8e-13 50.6 0.1 1.1e-12 48.1 0.1 1.8 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase GMC_oxred_N PF00732.19 ORF4734 - 0.01 15.2 0.0 0.016 14.6 0.0 1.2 1 0 0 1 1 1 0 GMC oxidoreductase FAD_binding_2 PF00890.24 ORF4734 - 0.043 12.9 0.2 0.24 10.4 0.1 2.1 2 1 0 2 2 2 0 FAD binding domain SRF-TF PF00319.18 ORF43858 - 1.4e-15 56.5 1.0 3.6e-15 55.2 1.0 1.8 1 0 0 1 1 1 1 SRF-type transcription factor (DNA-binding and dimerisation domain) YqfQ PF14181.6 ORF43752 - 6.1 7.0 7.3 9.2 6.4 7.3 1.3 1 0 0 1 1 1 0 YqfQ-like protein Vps23_core PF09454.10 ORF42663 - 0.029 14.3 0.4 7.6 6.6 0.0 3.1 3 0 0 3 3 3 0 Vps23 core domain TPR_14 PF13428.6 ORF42663 - 0.068 14.0 4.1 3.7 8.6 0.7 3.5 2 1 1 3 3 3 0 Tetratricopeptide repeat Ras_bdg_2 PF14847.6 ORF42514 - 0.067 13.5 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Ras-binding domain of Byr2 SRF-TF PF00319.18 ORF39604 - 1.4e-15 56.5 1.0 3.6e-15 55.2 1.0 1.8 1 0 0 1 1 1 1 SRF-type transcription factor (DNA-binding and dimerisation domain) TrkA_N PF02254.18 ORF3364 - 4.5e-27 94.6 0.0 1.1e-26 93.4 0.0 1.6 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_7 PF13241.6 ORF3364 - 0.0034 17.8 0.0 0.0077 16.7 0.0 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding ApbA PF02558.16 ORF3364 - 0.0056 16.3 0.0 0.01 15.5 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 ORF3364 - 0.011 15.0 0.1 0.014 14.6 0.1 1.4 1 1 0 1 1 1 0 FAD binding domain Na_H_Exchanger PF00999.21 ORF3364 - 0.013 14.3 0.6 0.017 13.9 0.6 1.1 1 0 0 1 1 1 0 Sodium/hydrogen exchanger family 2-Hacid_dh_C PF02826.19 ORF3364 - 0.015 14.7 0.0 0.057 12.8 0.0 1.9 1 1 1 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF3364 - 0.031 14.3 0.0 0.061 13.4 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ADH_zinc_N PF00107.26 ORF3364 - 0.06 13.3 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.14 ORF3364 - 0.078 12.5 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF3364 - 0.16 12.2 0.0 0.34 11.2 0.0 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF5324 PF17258.2 ORF32744 - 0.12 12.0 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5324) Patatin PF01734.22 ORF32251 - 4.6e-24 85.7 0.0 7.6e-24 85.0 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase MFS_1 PF07690.16 ORF28898 - 1.7e-11 43.7 12.0 3.4e-06 26.2 4.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily PTR2 PF00854.21 ORF28898 - 0.28 10.0 3.8 0.5 9.1 3.8 1.4 1 0 0 1 1 1 0 POT family TatC PF00902.18 ORF28898 - 7.7 6.3 9.9 1 9.2 3.7 2.5 2 2 0 2 2 2 0 Sec-independent protein translocase protein (TatC) zf-RING_2 PF13639.6 ORF26947 - 8.6e-09 35.6 11.1 1.1e-07 32.0 7.0 2.3 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF26947 - 2.1e-08 34.3 6.1 2.1e-08 34.3 6.1 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain Zn_ribbon_17 PF17120.5 ORF26947 - 6.9e-05 22.4 5.2 6.9e-05 22.4 5.2 2.2 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF26947 - 0.00013 21.6 6.0 0.038 13.7 2.7 2.7 2 0 0 2 2 2 2 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF26947 - 0.00026 20.8 13.5 0.00039 20.2 8.6 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF26947 - 0.00033 20.8 6.2 0.0092 16.1 3.4 2.6 2 0 0 2 2 2 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 ORF26947 - 0.00084 19.2 11.4 0.0031 17.3 7.8 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF26947 - 0.0028 17.7 1.9 0.0028 17.7 1.9 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF26947 - 0.0058 16.6 5.4 0.0058 16.6 5.4 2.4 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF26947 - 0.0061 16.4 6.0 0.0061 16.4 6.0 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) CTU2 PF10288.9 ORF26947 - 0.0088 16.3 0.9 0.0088 16.3 0.9 2.3 1 1 1 2 2 2 1 Cytoplasmic tRNA 2-thiolation protein 2 Prok-RING_4 PF14447.6 ORF26947 - 0.021 14.7 3.2 0.021 14.7 3.2 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zinc_ribbon_16 PF17034.5 ORF26947 - 0.034 14.4 5.3 0.034 14.3 1.1 2.3 2 0 0 2 2 2 0 Zinc-ribbon like family zf-RING_UBOX PF13445.6 ORF26947 - 0.04 13.9 5.2 0.043 13.9 2.2 2.3 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_6 PF14835.6 ORF26947 - 0.2 11.5 2.4 0.43 10.5 2.4 1.5 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Ribosomal_60s PF00428.19 ORF26947 - 0.33 11.5 0.2 0.33 11.5 0.2 2.2 2 0 0 2 2 2 0 60s Acidic ribosomal protein Tmpp129 PF10272.9 ORF26947 - 0.8 8.9 10.2 0.61 9.3 0.7 2.7 2 1 1 3 3 3 0 Putative transmembrane protein precursor zf-C3H2C3 PF17122.5 ORF26947 - 3.4 7.8 9.9 0.43 10.7 4.1 2.3 2 0 0 2 2 2 0 Zinc-finger Asp PF00026.23 ORF26376 - 1.8e-14 53.9 1.6 3.8e-14 52.8 1.6 1.5 1 1 0 1 1 1 1 Eukaryotic aspartyl protease HNH_2 PF13391.6 ORF25256 - 0.074 13.2 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 HNH endonuclease Gtr1_RagA PF04670.12 ORF24684 - 8.6e-92 306.7 2.0 1.1e-91 306.4 2.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Arf PF00025.21 ORF24684 - 2.5e-09 36.8 0.5 1.3e-08 34.5 0.2 2.0 2 0 0 2 2 2 1 ADP-ribosylation factor family Ras PF00071.22 ORF24684 - 4.1e-09 36.2 0.2 4.1e-09 36.2 0.2 2.0 2 1 0 2 2 2 1 Ras family SRPRB PF09439.10 ORF24684 - 2.2e-07 30.5 0.1 3.4e-07 29.9 0.1 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF24684 - 4e-07 30.3 0.1 1.1e-06 28.8 0.0 1.8 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF24684 - 4.3e-05 23.6 0.0 8.2e-05 22.7 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF815 PF05673.13 ORF24684 - 0.0034 16.6 0.4 0.056 12.6 0.4 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF815) ABC_tran PF00005.27 ORF24684 - 0.048 14.2 0.5 0.22 12.0 0.0 2.5 2 2 1 3 3 3 0 ABC transporter PduV-EutP PF10662.9 ORF24684 - 0.051 13.3 0.0 0.18 11.6 0.0 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation RuvB_N PF05496.12 ORF24684 - 0.095 12.4 0.0 0.3 10.8 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 ORF24684 - 0.096 13.1 0.1 1.7 9.1 0.1 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATP_bind_1 PF03029.17 ORF24684 - 0.98 9.1 5.0 3.5 7.4 0.4 2.6 1 1 0 2 2 2 0 Conserved hypothetical ATP binding protein FAST_1 PF06743.15 ORF24297 - 7.8e-07 28.9 0.3 0.014 15.3 0.1 4.0 3 1 1 4 4 4 2 FAST kinase-like protein, subdomain 1 MRP-L28 PF09812.9 ORF24297 - 0.76 9.9 2.5 5.1 7.2 0.2 2.2 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L28 HEAT PF02985.22 ORF15041 - 0.037 14.3 0.0 0.12 12.7 0.0 1.9 1 0 0 1 1 1 0 HEAT repeat OTCace_N PF02729.21 ORF13175 - 5.9e-48 162.6 0.0 1.5e-47 161.3 0.1 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 ORF13175 - 3.1e-29 102.1 0.0 4.6e-29 101.5 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FYVE PF01363.21 ORF109094 - 0.053 13.7 11.2 0.62 10.2 1.1 3.0 2 1 1 3 3 3 0 FYVE zinc finger Ribosomal_S27e PF01667.17 ORF109094 - 0.062 13.0 13.0 0.088 12.5 0.5 3.2 3 0 0 3 3 3 0 Ribosomal protein S27 DUF3039 PF11238.8 ORF109094 - 0.22 11.3 5.9 0.34 10.7 0.1 3.4 3 1 1 4 4 4 0 Protein of unknown function (DUF3039) OTT_1508_deam PF14441.6 ORF109094 - 0.6 10.2 6.0 0.97 9.5 0.0 3.4 2 1 1 3 3 3 0 OTT_1508-like deaminase DUF2318 PF10080.9 ORF109094 - 0.75 9.9 7.6 6.6 6.9 0.1 3.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2318) HypA PF01155.19 ORF109094 - 1.2 9.2 11.9 0.49 10.4 0.2 2.7 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_12 PF11331.8 ORF109094 - 9 6.2 16.6 11 6.0 0.9 4.1 3 1 0 4 4 4 0 Probable zinc-ribbon domain ADK_lid PF05191.14 ORF109094 - 9 6.4 8.8 1.5 8.9 0.0 3.8 5 0 0 5 5 5 0 Adenylate kinase, active site lid Peptidase_S11 PF00768.20 ORF106579 - 7.8e-74 248.1 0.1 9.4e-74 247.9 0.1 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase PBP5_C PF07943.13 ORF106579 - 2.5e-24 85.3 0.0 4.2e-24 84.6 0.0 1.4 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain Beta-lactamase2 PF13354.6 ORF106579 - 4.4e-05 23.2 0.0 6.3e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family Peptidase_S10 PF00450.22 ORF106471 - 3.3e-46 158.6 0.2 4.8e-46 158.0 0.2 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase DUF4820 PF16091.5 ORF104284 - 1.7 8.0 6.4 2.4 7.5 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) YqfQ PF14181.6 ORF104284 - 6.1 7.0 7.3 9.2 6.4 7.3 1.3 1 0 0 1 1 1 0 YqfQ-like protein zf-C2H2 PF00096.26 NODE_21734_length_929_cov_3610.174497_g16201_i3reverse_frame_1 - 7.2e-08 32.5 13.0 0.0014 19.0 0.9 4.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_21734_length_929_cov_3610.174497_g16201_i3reverse_frame_1 - 0.00041 20.9 10.7 0.0078 17.0 0.7 3.8 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_21734_length_929_cov_3610.174497_g16201_i3reverse_frame_1 - 0.053 14.0 0.1 0.053 14.0 0.1 3.7 3 0 0 3 3 3 0 Zinc-finger double domain zf-C2H2_8 PF15909.5 NODE_21734_length_929_cov_3610.174497_g16201_i3reverse_frame_1 - 0.8 10.0 6.1 2.6 8.4 2.5 2.4 1 1 1 2 2 2 0 C2H2-type zinc ribbon # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks48.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks48.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks48.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks48.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:11:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TraI_2_C PF07515.11 NODE_21651_length_933_cov_80.604677_g16680_i0reverse_frame_3 - 0.049 13.6 0.1 0.12 12.3 0.1 1.6 1 0 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term PCI PF01399.27 ORF96809 - 1.4e-21 76.9 0.3 3.8e-21 75.6 0.3 1.6 1 0 0 1 1 1 1 PCI domain Rpn3_C PF08375.11 ORF96809 - 0.012 16.0 0.0 0.025 15.0 0.0 1.6 1 0 0 1 1 1 0 Proteasome regulatory subunit C-terminal CSN8_PSD8_EIF3K PF10075.9 ORF96809 - 0.03 14.3 0.5 0.25 11.3 0.5 2.2 1 1 0 1 1 1 0 CSN8/PSMD8/EIF3K family PAM2 PF07145.15 ORF96809 - 0.27 11.0 2.7 9.8 6.1 0.2 2.5 2 0 0 2 2 2 0 Ataxin-2 C-terminal region p450 PF00067.22 ORF95686 - 8.7e-31 107.2 0.7 1.1e-30 106.8 0.7 1.1 1 0 0 1 1 1 1 Cytochrome P450 Exog_C PF18026.1 ORF95686 - 0.054 13.5 0.4 0.19 11.8 0.4 1.9 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain DUF3135 PF11333.8 ORF95686 - 0.074 13.3 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) PS_Dcarbxylase PF02666.15 ORF94646 - 4.1e-53 179.9 0.0 5.6e-53 179.5 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase Ion_trans PF00520.31 ORF93690 - 9.6e-05 21.7 4.6 0.00014 21.2 4.6 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF93690 - 0.054 13.4 0.0 0.17 11.9 0.0 1.8 1 0 0 1 1 1 0 EF-hand domain Cg6151-P PF10233.9 ORF93690 - 0.079 13.3 2.7 5.7 7.3 0.2 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein CG6151-P Phage_holin_3_6 PF07332.11 ORF93690 - 1.4 9.0 10.2 3.5 7.7 0.3 2.6 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 ORF93690 - 4.8 5.8 5.7 8.4 5.0 5.6 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DOMON PF03351.17 ORF92863 - 0.00019 21.6 0.0 0.00033 20.9 0.0 1.4 1 0 0 1 1 1 1 DOMON domain DUF2427 PF10348.9 ORF92863 - 0.0066 16.2 13.5 0.01 15.6 7.6 3.1 2 1 0 2 2 2 1 Domain of unknown function (DUF2427) DUF3748 PF12566.8 ORF92863 - 0.13 12.2 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3748) Myco_arth_vir_N PF09610.10 ORF92863 - 1.9 8.7 4.7 4.5 7.5 4.7 1.6 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) p450 PF00067.22 ORF90401 - 8.7e-31 107.2 0.7 1.1e-30 106.8 0.7 1.1 1 0 0 1 1 1 1 Cytochrome P450 Exog_C PF18026.1 ORF90401 - 0.054 13.5 0.4 0.19 11.8 0.4 1.9 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain DUF3135 PF11333.8 ORF90401 - 0.074 13.3 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) DUF2475 PF10629.9 ORF9014 - 1.8e-07 31.2 0.2 0.085 13.1 0.0 3.5 3 0 0 3 3 3 2 Protein of unknown function (DUF2475) Oxysterol_BP PF01237.18 ORF8929 - 2.2e-06 26.8 0.0 2.2e-06 26.8 0.0 1.7 2 0 0 2 2 2 1 Oxysterol-binding protein Peptidase_S49_N PF08496.10 ORF86688 - 4.8e-20 72.2 0.0 7.3e-20 71.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal Peptidase_S49 PF01343.18 ORF86688 - 1e-16 61.3 0.0 1.6e-16 60.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.23 ORF86688 - 0.00052 20.0 0.0 0.00077 19.4 0.0 1.3 1 0 0 1 1 1 1 Clp protease SDH_sah PF01972.16 ORF86688 - 0.043 12.8 0.0 0.062 12.3 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF86688 - 0.097 12.9 0.1 0.22 11.8 0.1 1.5 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) RCC1 PF00415.18 ORF85350 - 4.1e-44 149.0 16.7 2.3e-13 50.5 0.0 7.1 6 2 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF85350 - 7.8e-33 111.6 20.5 6.7e-08 32.1 0.3 5.6 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF4213 PF13938.6 ORF85350 - 0.046 14.0 1.1 25 5.2 0.0 3.9 4 1 1 5 5 5 0 Putative heavy-metal chelation Beta_helix_2 PF18835.1 ORF85350 - 0.056 13.2 0.0 0.22 11.3 0.0 2.0 2 0 0 2 2 2 0 Beta helix repeat of Inulin fructotransferase tRNA-synt_1 PF00133.22 ORF81994 - 1.5e-14 53.2 1.1 5.6e-14 51.3 1.1 1.7 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) vATP-synt_E PF01991.18 ORF81994 - 0.013 14.9 0.1 0.028 13.8 0.1 1.5 1 0 0 1 1 1 0 ATP synthase (E/31 kDa) subunit DUF2200 PF09966.9 ORF81994 - 0.014 15.5 0.3 0.048 13.8 0.3 2.0 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2200) LEA_4 PF02987.16 ORF81994 - 0.032 14.3 3.2 2.5 8.2 1.1 2.6 2 0 0 2 2 2 0 Late embryogenesis abundant protein Penicil_amidase PF01804.18 ORF81462 - 3.6e-21 75.8 0.0 4e-21 75.7 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase DUF1810 PF08837.11 ORF81080 - 1e-22 80.4 0.0 1.5e-22 79.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1810) DiS_P_DiS PF06750.13 ORF81065 - 3.4e-34 116.8 0.4 5.9e-34 116.0 0.4 1.4 1 0 0 1 1 1 1 Bacterial Peptidase A24 N-terminal domain Peptidase_A24 PF01478.18 ORF81065 - 3.9e-19 69.0 11.3 3.9e-19 69.0 11.3 2.0 2 1 0 2 2 2 1 Type IV leader peptidase family DUF2039 PF10217.9 ORF81065 - 0.07 13.5 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) LRR_4 PF12799.7 ORF78475 - 4.8e-05 23.6 2.3 0.00076 19.8 0.3 3.3 3 0 0 3 3 3 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF78475 - 0.23 11.3 2.0 0.84 9.4 1.9 2.0 1 1 0 1 1 1 0 Leucine rich repeat Microtub_bd PF16796.5 ORF75569 - 1.7e-09 37.8 1.1 1.7e-09 37.8 1.1 2.8 2 1 1 3 3 3 1 Microtubule binding Fib_alpha PF08702.10 ORF75569 - 0.00024 21.3 8.6 0.00024 21.3 8.6 3.5 1 1 2 3 3 3 2 Fibrinogen alpha/beta chain family ADIP PF11559.8 ORF75569 - 0.0025 17.9 64.8 0.0037 17.4 10.0 5.0 1 1 4 5 5 5 3 Afadin- and alpha -actinin-Binding GAS PF13851.6 ORF75569 - 0.0049 16.2 28.4 0.0049 16.2 28.4 3.5 1 1 3 4 4 4 2 Growth-arrest specific micro-tubule binding UPF0242 PF06785.11 ORF75569 - 0.0051 17.0 68.6 0.1 12.7 21.6 3.3 1 1 2 3 3 3 2 Uncharacterised protein family (UPF0242) N-terminus PKcGMP_CC PF16808.5 ORF75569 - 0.032 14.1 2.5 0.032 14.1 2.5 7.7 8 1 0 8 8 6 0 Coiled-coil N-terminus of cGMP-dependent protein kinase MCC-bdg_PDZ PF10506.9 ORF75569 - 0.032 14.2 1.1 0.032 14.2 1.1 4.4 4 2 0 4 4 4 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Csm1_N PF18504.1 ORF75569 - 0.057 13.8 2.7 0.057 13.8 2.7 7.7 2 2 6 9 9 8 0 Csm1 N-terminal domain DUF4407 PF14362.6 ORF75569 - 0.061 12.7 46.1 0.074 12.4 17.5 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF75569 - 0.092 13.4 31.4 0.27 11.9 4.9 5.6 2 2 3 5 5 5 0 SlyX HrpB7 PF09486.10 ORF75569 - 0.31 11.4 35.0 1.3 9.4 10.7 4.0 1 1 3 4 4 4 0 Bacterial type III secretion protein (HrpB7) DASH_Hsk3 PF08227.11 ORF75569 - 0.47 10.9 5.7 6.8 7.1 0.1 4.5 5 1 1 6 6 6 0 DASH complex subunit Hsk3 like DUF4686 PF15742.5 ORF75569 - 0.55 9.3 65.5 0.05 12.7 44.2 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4686) AAA_13 PF13166.6 ORF75569 - 0.7 8.5 55.5 0.99 8.0 30.6 2.4 1 1 1 2 2 2 0 AAA domain DASH_Dad4 PF08650.10 ORF75569 - 0.73 9.8 12.8 7.3 6.6 0.2 4.2 3 1 1 4 4 4 0 DASH complex subunit Dad4 NPV_P10 PF05531.12 ORF75569 - 0.87 10.1 23.3 1 9.9 0.8 4.3 3 2 1 4 4 4 0 Nucleopolyhedrovirus P10 protein DUF4200 PF13863.6 ORF75569 - 4.2 7.8 78.4 0.24 11.8 16.1 4.4 1 1 3 4 4 4 0 Domain of unknown function (DUF4200) Speriolin_N PF15058.6 ORF75569 - 4.5 7.3 9.5 3.4 7.7 0.5 2.7 2 2 0 2 2 2 0 Speriolin N terminus Pox_A_type_inc PF04508.12 ORF75569 - 4.7 7.2 11.1 0.11 12.4 1.0 3.6 3 0 0 3 3 2 0 Viral A-type inclusion protein repeat Tropomyosin_1 PF12718.7 ORF75569 - 4.7 7.4 76.0 0.064 13.4 8.1 5.0 1 1 3 4 4 3 0 Tropomyosin like Lebercilin PF15619.6 ORF75569 - 5.1 6.7 73.1 1.2 8.8 25.0 3.6 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease TPR_MLP1_2 PF07926.12 ORF75569 - 6.1 6.9 67.6 0.23 11.6 9.6 5.1 1 1 3 4 4 4 0 TPR/MLP1/MLP2-like protein Myb_DNA-bind_3 PF12776.7 ORF75569 - 9 7.4 14.9 20 6.2 5.2 3.5 1 1 1 3 3 3 0 Myb/SANT-like DNA-binding domain DUF1664 PF07889.12 ORF75569 - 9.1 6.3 40.9 4.1 7.5 1.5 4.5 2 1 2 4 4 4 0 Protein of unknown function (DUF1664) EamA PF00892.20 ORF75535 - 2e-10 41.0 13.4 1.1e-05 25.6 2.3 2.2 2 0 0 2 2 2 2 EamA-like transporter family DMT_6 PF04342.12 ORF75535 - 0.16 12.2 1.9 1.1 9.5 0.2 2.3 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) TMEM234 PF10639.9 ORF75535 - 2 8.5 6.0 2.8 8.0 0.5 2.5 3 0 0 3 3 3 0 Putative transmembrane family 234 Pinin_SDK_memA PF04696.13 ORF74642 - 2e-19 69.9 14.3 2e-19 69.9 14.3 3.6 2 1 2 4 4 4 1 pinin/SDK/memA/ protein conserved region Helicase_C_4 PF13871.6 ORF71842 - 0.059 13.0 2.9 0.074 12.7 2.1 1.4 1 1 0 1 1 1 0 C-terminal domain on Strawberry notch homologue Elf4 PF07011.11 ORF71842 - 1 9.3 8.0 0.44 10.5 1.6 2.4 1 1 1 2 2 2 0 Early Flowering 4 domain Pirin_C PF05726.13 ORF70790 - 7.3e-19 68.1 0.0 1.1e-18 67.5 0.0 1.3 1 0 0 1 1 1 1 Pirin C-terminal cupin domain Pirin PF02678.16 ORF70790 - 3.1e-18 65.7 0.2 4.9e-18 65.1 0.2 1.3 1 0 0 1 1 1 1 Pirin DAGK_cat PF00781.24 ORF69854 - 2.1e-17 62.9 0.0 7.5e-17 61.1 0.0 1.8 1 1 0 1 1 1 1 Diacylglycerol kinase catalytic domain DAGK_acc PF00609.19 ORF69854 - 3.3e-09 37.3 0.0 6.5e-09 36.3 0.0 1.5 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain DUF1494 PF07379.11 ORF65128 - 0.95 9.3 4.9 0.73 9.7 1.5 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1494) NmrA PF05368.13 ORF61450 - 5.4e-25 88.3 0.2 6.4e-25 88.1 0.2 1.0 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 ORF61450 - 6.3e-11 42.5 0.1 8.5e-11 42.1 0.1 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 ORF61450 - 4.6e-05 23.0 0.0 6.7e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Microtub_bd PF16796.5 ORF54005 - 1.7e-09 37.8 1.1 1.7e-09 37.8 1.1 2.8 2 1 1 3 3 3 1 Microtubule binding Fib_alpha PF08702.10 ORF54005 - 0.00024 21.3 8.6 0.00024 21.3 8.6 3.5 1 1 2 3 3 3 2 Fibrinogen alpha/beta chain family ADIP PF11559.8 ORF54005 - 0.0025 17.9 64.8 0.0037 17.4 10.0 5.0 1 1 4 5 5 5 3 Afadin- and alpha -actinin-Binding GAS PF13851.6 ORF54005 - 0.0049 16.2 28.4 0.0049 16.2 28.4 3.5 1 1 3 4 4 4 2 Growth-arrest specific micro-tubule binding UPF0242 PF06785.11 ORF54005 - 0.0051 17.0 68.6 0.1 12.7 21.6 3.3 1 1 2 3 3 3 2 Uncharacterised protein family (UPF0242) N-terminus PKcGMP_CC PF16808.5 ORF54005 - 0.032 14.1 2.5 0.032 14.1 2.5 7.7 8 1 0 8 8 6 0 Coiled-coil N-terminus of cGMP-dependent protein kinase MCC-bdg_PDZ PF10506.9 ORF54005 - 0.032 14.2 1.1 0.032 14.2 1.1 4.4 4 2 0 4 4 4 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Csm1_N PF18504.1 ORF54005 - 0.057 13.8 2.7 0.057 13.8 2.7 7.7 2 2 6 9 9 8 0 Csm1 N-terminal domain DUF4407 PF14362.6 ORF54005 - 0.061 12.7 46.1 0.074 12.4 17.5 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF54005 - 0.092 13.4 31.4 0.27 11.9 4.9 5.6 2 2 3 5 5 5 0 SlyX HrpB7 PF09486.10 ORF54005 - 0.31 11.4 35.0 1.3 9.4 10.7 4.0 1 1 3 4 4 4 0 Bacterial type III secretion protein (HrpB7) DASH_Hsk3 PF08227.11 ORF54005 - 0.47 10.9 5.7 6.8 7.1 0.1 4.5 5 1 1 6 6 6 0 DASH complex subunit Hsk3 like DUF4686 PF15742.5 ORF54005 - 0.55 9.3 65.5 0.05 12.7 44.2 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4686) AAA_13 PF13166.6 ORF54005 - 0.7 8.5 55.5 0.99 8.0 30.6 2.4 1 1 1 2 2 2 0 AAA domain DASH_Dad4 PF08650.10 ORF54005 - 0.73 9.8 12.8 7.3 6.6 0.2 4.2 3 1 1 4 4 4 0 DASH complex subunit Dad4 NPV_P10 PF05531.12 ORF54005 - 0.87 10.1 23.3 1 9.9 0.8 4.3 3 2 1 4 4 4 0 Nucleopolyhedrovirus P10 protein DUF4200 PF13863.6 ORF54005 - 4.2 7.8 78.4 0.24 11.8 16.1 4.4 1 1 3 4 4 4 0 Domain of unknown function (DUF4200) Speriolin_N PF15058.6 ORF54005 - 4.5 7.3 9.5 3.4 7.7 0.5 2.7 2 2 0 2 2 2 0 Speriolin N terminus Pox_A_type_inc PF04508.12 ORF54005 - 4.7 7.2 11.1 0.11 12.4 1.0 3.6 3 0 0 3 3 2 0 Viral A-type inclusion protein repeat Tropomyosin_1 PF12718.7 ORF54005 - 4.7 7.4 76.0 0.064 13.4 8.1 5.0 1 1 3 4 4 3 0 Tropomyosin like Lebercilin PF15619.6 ORF54005 - 5.1 6.7 73.1 1.2 8.8 25.0 3.6 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease TPR_MLP1_2 PF07926.12 ORF54005 - 6.1 6.9 67.6 0.23 11.6 9.6 5.1 1 1 3 4 4 4 0 TPR/MLP1/MLP2-like protein Myb_DNA-bind_3 PF12776.7 ORF54005 - 9 7.4 14.9 20 6.2 5.2 3.5 1 1 1 3 3 3 0 Myb/SANT-like DNA-binding domain DUF1664 PF07889.12 ORF54005 - 9.1 6.3 40.9 4.1 7.5 1.5 4.5 2 1 2 4 4 4 0 Protein of unknown function (DUF1664) Metallophos PF00149.28 ORF53843 - 2.3e-31 109.9 0.1 3.7e-31 109.2 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF53843 - 0.029 14.8 0.4 0.055 13.9 0.4 1.4 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain zf-TAZ PF02135.16 ORF53843 - 0.03 14.8 1.6 0.03 14.8 1.6 1.7 2 0 0 2 2 2 0 TAZ zinc finger Epimerase PF01370.21 ORF51810 - 6e-47 160.1 0.0 7.7e-47 159.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF51810 - 1.1e-22 80.9 0.0 1.7e-22 80.3 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 ORF51810 - 4.4e-13 48.9 0.0 6.3e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 ORF51810 - 2.7e-09 36.6 0.0 6.2e-09 35.4 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 ORF51810 - 1.9e-05 23.9 0.0 0.0072 15.5 0.0 2.4 2 0 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 ORF51810 - 3.2e-05 23.2 0.0 0.049 12.8 0.0 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein KR PF08659.10 ORF51810 - 0.1 12.5 0.1 0.24 11.3 0.1 1.8 1 1 0 1 1 1 0 KR domain adh_short PF00106.25 ORF51810 - 0.15 11.5 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase ThiF PF00899.21 ORF51810 - 0.24 10.8 0.2 2.8 7.2 0.4 2.0 2 0 0 2 2 2 0 ThiF family DnaJ-X PF14308.6 ORF50543 - 0.035 13.5 3.1 0.058 12.8 3.1 1.3 1 1 0 1 1 1 0 X-domain of DnaJ-containing Bromo_coat PF01318.18 ORF50543 - 0.18 11.8 0.6 1.1 9.3 0.1 2.0 1 1 1 2 2 2 0 Bromovirus coat protein Amino_oxidase PF01593.24 ORF45596 - 6.1e-42 144.5 0.0 7.1e-42 144.2 0.0 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DOMON PF03351.17 ORF43832 - 0.00019 21.6 0.0 0.00033 20.9 0.0 1.4 1 0 0 1 1 1 1 DOMON domain DUF2427 PF10348.9 ORF43832 - 0.0066 16.2 13.5 0.01 15.6 7.6 3.1 2 1 0 2 2 2 1 Domain of unknown function (DUF2427) DUF3748 PF12566.8 ORF43832 - 0.13 12.2 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3748) Myco_arth_vir_N PF09610.10 ORF43832 - 1.9 8.7 4.7 4.5 7.5 4.7 1.6 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) LRR_4 PF12799.7 ORF40762 - 3.8e-46 154.3 41.7 4.7e-08 33.2 0.5 6.7 1 1 8 10 10 10 9 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF40762 - 1.1e-32 111.6 43.9 3.3e-13 49.2 1.8 5.1 2 1 4 6 6 6 6 Leucine rich repeat LRR_9 PF14580.6 ORF40762 - 1.2e-20 73.8 10.7 9.7e-07 28.5 0.2 4.4 1 1 3 4 4 4 4 Leucine-rich repeat LRR_1 PF00560.33 ORF40762 - 9.7e-10 37.6 17.8 1.4 9.8 0.1 9.4 10 0 0 10 10 10 3 Leucine Rich Repeat LRR_6 PF13516.6 ORF40762 - 4.9e-05 23.0 20.3 0.083 13.0 0.3 9.1 10 0 0 10 10 10 1 Leucine Rich repeat FTH PF01827.27 ORF40762 - 0.02 14.7 1.6 0.045 13.5 0.6 2.1 2 0 0 2 2 2 0 FTH domain SERTA PF06031.13 ORF40762 - 0.097 12.4 1.7 3.2 7.5 0.2 3.4 3 0 0 3 3 3 0 SERTA motif S_4TM PF18159.1 ORF4013 - 0.21 10.9 0.4 0.34 10.2 0.4 1.3 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Glutaminase PF04960.15 ORF3488 - 1.2e-105 352.8 0.0 1.4e-105 352.6 0.0 1.0 1 0 0 1 1 1 1 Glutaminase zf-MYND PF01753.18 ORF30694 - 2.1e-08 34.1 14.4 2.1e-08 34.1 14.4 3.3 2 1 0 2 2 2 1 MYND finger GHMP_kinases_N PF00288.26 ORF20324 - 3.4e-14 52.8 0.3 8.2e-14 51.6 0.3 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 ORF20324 - 1.3e-10 41.5 0.7 5.2e-10 39.6 0.0 2.3 3 0 0 3 3 3 1 GHMP kinases C terminal Peptidase_C26 PF07722.13 ORF16778 - 1.3e-05 25.1 0.0 2.6e-05 24.1 0.0 1.5 2 0 0 2 2 2 1 Peptidase C26 STIMATE PF12400.8 ORF14943 - 1e-14 55.2 9.2 1e-14 55.2 9.2 2.0 2 0 0 2 2 2 1 STIMATE family EOS1 PF12326.8 ORF14943 - 0.01 15.8 0.1 0.01 15.8 0.1 2.2 2 0 0 2 2 2 1 N-glycosylation protein AMP-binding PF00501.28 ORF12589 - 1.9e-39 135.5 0.0 2.5e-39 135.1 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF12589 - 4.4e-05 24.4 0.0 0.00011 23.1 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Helicase_C_4 PF13871.6 ORF111297 - 0.059 13.0 2.9 0.074 12.7 2.1 1.4 1 1 0 1 1 1 0 C-terminal domain on Strawberry notch homologue Elf4 PF07011.11 ORF111297 - 1 9.3 8.0 0.44 10.5 1.6 2.4 1 1 1 2 2 2 0 Early Flowering 4 domain Pinin_SDK_memA PF04696.13 ORF109495 - 2e-19 69.9 14.3 2e-19 69.9 14.3 3.6 2 1 2 4 4 4 1 pinin/SDK/memA/ protein conserved region MFS_1 PF07690.16 ORF107941 - 2.3e-16 59.7 9.2 3e-16 59.3 9.2 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily CRAL_TRIO PF00650.20 ORF102364 - 2.2e-19 69.7 0.0 3e-19 69.3 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain Cas_CXXC_CXXC PF09706.10 NODE_21905_length_925_cov_140.489888_g16904_i0reverse_frame_1 - 0.048 13.9 0.1 0.11 12.8 0.1 1.6 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) SPC12 PF06645.13 NODE_21905_length_925_cov_140.489888_g16904_i0forward_frame_1 - 0.091 12.9 0.9 0.091 12.9 0.9 2.1 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) ABC_membrane PF00664.23 NODE_21882_length_926_cov_2.806958_g16885_i0reverse_frame_1 - 4.3e-23 82.3 0.5 6e-23 81.9 0.5 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region MFS_1 PF07690.16 NODE_21879_length_926_cov_11.315376_g16882_i0reverse_frame_1 - 6.6e-08 31.9 1.8 8e-08 31.6 1.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4806 PF16064.5 NODE_21874_length_926_cov_86.740741_g16877_i0forward_frame_1 - 0.34 11.2 4.4 0.22 11.8 1.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4806) DUF485 PF04341.12 NODE_21730_length_930_cov_80.154190_g16749_i0reverse_frame_2 - 0.38 10.7 3.3 0.31 11.0 1.4 1.9 2 0 0 2 2 2 0 Protein of unknown function, DUF485 ROK PF00480.20 ORF97316 - 2e-96 322.9 0.0 2.3e-96 322.8 0.0 1.0 1 0 0 1 1 1 1 ROK family BcrAD_BadFG PF01869.20 ORF97316 - 0.049 13.1 0.0 2 7.8 0.0 2.1 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family MccV PF17508.2 ORF96944 - 0.19 12.3 10.6 0.16 12.6 7.4 2.4 1 1 1 2 2 2 0 Microcin V bacteriocin DUF456 PF04306.13 ORF96944 - 1.4 9.2 8.7 2.9 8.2 8.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Peptidase_C1 PF00112.23 ORF9675 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF9675 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF9675 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Glyco_tran_28_C PF04101.16 ORF94510 - 7.8e-08 32.5 0.0 1.1e-07 32.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain UDPGT PF00201.18 ORF94510 - 0.00021 20.3 0.0 0.0003 19.7 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase PDZ_3 PF17815.1 ORF90967 - 1.8e-27 96.0 0.0 2.9e-27 95.3 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF90967 - 0.0069 16.2 0.4 1.9 8.4 0.1 2.9 3 0 0 3 3 3 2 PDZ domain PDZ_2 PF13180.6 ORF90967 - 0.025 14.9 0.0 0.4 11.0 0.0 2.5 2 1 0 2 2 2 0 PDZ domain PDZ_1 PF12812.7 ORF90967 - 0.092 12.8 0.0 7.4 6.7 0.0 2.3 2 0 0 2 2 2 0 PDZ-like domain Peptidase_C1 PF00112.23 ORF89453 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF89453 - 9.3e-15 54.8 3.6 9.3e-15 54.8 3.6 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF89453 - 2.9e-05 23.0 0.8 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family MccV PF17508.2 ORF89056 - 0.19 12.3 10.6 0.16 12.6 7.4 2.4 1 1 1 2 2 2 0 Microcin V bacteriocin DUF456 PF04306.13 ORF89056 - 1.4 9.2 8.7 2.9 8.2 8.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) TPR_12 PF13424.6 ORF88815 - 7.8e-07 29.3 5.8 6.9e-05 23.1 0.5 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF88815 - 0.00058 19.3 3.5 0.0033 16.8 3.4 2.0 1 1 0 1 1 1 1 MalT-like TPR region TPR_16 PF13432.6 ORF88815 - 0.00089 19.9 2.1 0.32 11.7 0.2 2.9 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF88815 - 0.0014 18.5 2.6 0.032 14.1 0.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF88815 - 0.013 16.3 3.5 0.52 11.3 0.1 3.8 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF88815 - 0.014 15.6 2.3 14 6.2 0.0 4.6 5 0 0 5 5 5 0 Tetratricopeptide repeat Phenol_Hydrox PF02332.18 ORF88815 - 0.03 13.9 0.0 0.072 12.6 0.0 1.6 2 0 0 2 2 2 0 Methane/Phenol/Toluene Hydroxylase TPR_2 PF07719.17 ORF88815 - 0.049 13.8 1.9 3.3 8.1 0.1 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF88815 - 0.12 12.9 1.5 4.2 7.9 0.8 3.2 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF88815 - 1.1 10.1 3.0 1e+02 3.9 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat Peptidase_C1 PF00112.23 ORF84241 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF84241 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF84241 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF80338 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF80338 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF80338 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF79474 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF79474 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF79474 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family DUF4111 PF13427.6 ORF78049 - 0.0089 16.2 0.1 0.032 14.4 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4111) DUF4905 PF16248.5 ORF78049 - 0.25 11.3 0.1 0.25 11.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4905) FAD_binding_7 PF03441.14 ORF74332 - 7.7e-72 241.0 0.0 1e-71 240.7 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase zf-B_box PF00643.24 ORF68588 - 4.3e-16 58.8 8.0 3.7e-10 39.8 1.0 2.2 2 0 0 2 2 2 2 B-box zinc finger CEBP_ZZ PF16366.5 ORF68588 - 0.0044 17.2 5.9 0.013 15.7 0.4 2.3 2 0 0 2 2 2 1 Cytoplasmic polyadenylation element-binding protein ZZ domain DUF2318 PF10080.9 ORF68588 - 0.16 12.1 0.2 0.16 12.1 0.2 2.4 2 1 0 2 2 2 0 Predicted membrane protein (DUF2318) PQQ_3 PF13570.6 ORF68255 - 0.07 13.6 0.1 8 7.1 0.0 2.9 2 0 0 2 2 2 0 PQQ-like domain MccV PF17508.2 ORF66056 - 0.19 12.3 10.6 0.16 12.6 7.4 2.4 1 1 1 2 2 2 0 Microcin V bacteriocin DUF456 PF04306.13 ORF66056 - 1.4 9.2 8.7 2.9 8.2 8.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Sulf_transp PF04143.14 ORF65110 - 9e-13 48.5 3.1 9e-13 48.5 3.1 3.1 3 0 0 3 3 3 3 Sulphur transport DUF1778 PF08681.11 ORF60014 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1778) CTD_bind PF04818.13 ORF59227 - 0.8 10.6 5.6 0.86 10.5 0.5 3.3 4 0 0 4 4 4 0 RNA polymerase II-binding domain. Pkinase PF00069.25 ORF58478 - 7.3e-61 205.8 0.4 8.5e-61 205.6 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58478 - 2.2e-29 102.5 0.1 3e-29 102.1 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF58478 - 7.7e-07 28.7 0.0 1.7e-05 24.3 0.0 2.1 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF58478 - 0.00027 20.3 0.0 0.00042 19.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF58478 - 0.00031 20.4 0.1 0.034 13.8 0.0 2.2 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF58478 - 0.0033 16.3 0.2 0.096 11.4 0.0 2.1 2 0 0 2 2 2 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF58478 - 0.0077 15.2 0.4 0.015 14.3 0.4 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Phi29_Phage_SSB PF17427.2 ORF58478 - 0.081 13.1 0.2 0.14 12.4 0.2 1.3 1 0 0 1 1 1 0 Phage Single-stranded DNA-binding protein APH PF01636.23 ORF58478 - 0.17 11.7 0.0 0.98 9.3 0.0 1.9 1 1 0 2 2 2 0 Phosphotransferase enzyme family Ank_2 PF12796.7 ORF58031 - 3.2e-42 143.0 0.3 8.8e-13 48.7 0.1 4.0 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF58031 - 3.7e-24 84.5 1.7 0.013 15.8 0.0 7.1 3 1 4 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF58031 - 4.6e-24 81.9 0.0 0.0096 16.4 0.0 6.6 7 0 0 7 7 7 6 Ankyrin repeat Ank PF00023.30 ORF58031 - 1.6e-21 75.7 1.9 0.006 17.0 0.0 6.4 5 1 1 6 6 6 5 Ankyrin repeat Ank_4 PF13637.6 ORF58031 - 4.9e-18 65.2 1.2 0.00011 22.7 0.0 4.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) DUF2407 PF10302.9 ORF58031 - 0.036 14.6 0.0 0.071 13.7 0.0 1.4 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Aminotran_1_2 PF00155.21 ORF58024 - 2.3e-28 99.4 0.0 3.4e-28 98.9 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 ORF58024 - 1.3e-13 50.6 0.0 2.3e-13 49.7 0.0 1.4 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase Beta_elim_lyase PF01212.21 ORF58024 - 0.004 16.5 0.0 0.0059 15.9 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DUF4201 PF13870.6 ORF57765 - 9.2e-33 113.4 35.4 9.2e-33 113.4 35.4 3.1 2 1 1 3 3 3 1 Domain of unknown function (DUF4201) Fe-ADH PF00465.19 ORF57765 - 0.021 13.7 0.0 0.038 12.8 0.0 1.4 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase DivIC PF04977.15 ORF57765 - 0.037 13.8 1.1 0.037 13.8 1.1 5.8 3 1 1 5 5 5 0 Septum formation initiator DUF2205 PF10224.9 ORF57765 - 0.087 12.8 0.2 0.087 12.8 0.2 4.5 5 0 0 5 5 5 0 Short coiled-coil protein WXG100 PF06013.12 ORF57765 - 5.4 7.3 12.2 25 5.2 1.3 4.5 3 2 1 4 4 4 0 Proteins of 100 residues with WXG CobW_C PF07683.14 ORF52441 - 9.1e-17 60.8 0.0 1.6e-16 60.0 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain cobW PF02492.19 ORF52441 - 5.6e-09 35.8 0.0 1e-08 35.0 0.0 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain DUF2946 PF11162.8 ORF52441 - 0.35 11.5 5.0 1.1 9.9 5.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) Pkinase PF00069.25 ORF52101 - 7.1e-30 104.2 0.0 9.8e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF52101 - 5e-07 29.3 0.0 7.6e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4335 PF14233.6 ORF52101 - 0.00084 19.3 0.0 0.013 15.4 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) KA1 PF02149.19 ORF52101 - 0.0089 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Kinase associated domain 1 AA_permease_N PF08403.10 ORF52101 - 0.14 11.6 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Amino acid permease N-terminal Exo_endo_phos PF03372.23 ORF51085 - 2.4e-05 24.0 0.1 4.2e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Sulf_transp PF04143.14 ORF50775 - 5.8e-13 49.1 2.3 5.8e-13 49.1 2.3 3.1 3 0 0 3 3 3 3 Sulphur transport MccV PF17508.2 ORF50046 - 0.19 12.3 10.6 0.16 12.6 7.4 2.4 1 1 1 2 2 2 0 Microcin V bacteriocin DUF456 PF04306.13 ORF50046 - 1.4 9.2 8.7 2.9 8.2 8.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Pkinase PF00069.25 ORF46101 - 7.1e-30 104.2 0.0 9.8e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46101 - 5e-07 29.3 0.0 7.6e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4335 PF14233.6 ORF46101 - 0.00084 19.3 0.0 0.013 15.4 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) KA1 PF02149.19 ORF46101 - 0.0089 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Kinase associated domain 1 AA_permease_N PF08403.10 ORF46101 - 0.14 11.6 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Amino acid permease N-terminal Pkinase PF00069.25 ORF42022 - 7.1e-30 104.2 0.0 9.8e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42022 - 5e-07 29.3 0.0 7.6e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4335 PF14233.6 ORF42022 - 0.00084 19.3 0.0 0.013 15.4 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) KA1 PF02149.19 ORF42022 - 0.0089 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Kinase associated domain 1 AA_permease_N PF08403.10 ORF42022 - 0.14 11.6 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Amino acid permease N-terminal Pkinase PF00069.25 ORF4109 - 7.1e-30 104.2 0.0 9.8e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4109 - 5e-07 29.3 0.0 7.6e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4335 PF14233.6 ORF4109 - 0.00084 19.3 0.0 0.013 15.4 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) KA1 PF02149.19 ORF4109 - 0.0089 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Kinase associated domain 1 AA_permease_N PF08403.10 ORF4109 - 0.14 11.6 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Amino acid permease N-terminal DUF4795 PF16043.5 ORF38304 - 0.00022 20.9 34.1 0.036 13.7 2.6 3.8 1 1 2 4 4 4 2 Domain of unknown function (DUF4795) TMF_TATA_bd PF12325.8 ORF38304 - 0.00024 21.3 18.7 0.15 12.2 6.5 4.2 4 0 0 4 4 4 1 TATA element modulatory factor 1 TATA binding EzrA PF06160.12 ORF38304 - 0.00045 18.5 22.0 0.0018 16.6 1.7 3.6 3 1 0 3 3 3 2 Septation ring formation regulator, EzrA PhaP_Bmeg PF09602.10 ORF38304 - 0.0037 17.2 13.9 0.044 13.7 5.5 3.4 2 1 1 3 3 3 1 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) SHE3 PF17078.5 ORF38304 - 0.0057 16.4 18.8 0.1 12.3 10.8 2.4 2 0 0 2 2 2 2 SWI5-dependent HO expression protein 3 LPP PF04728.13 ORF38304 - 0.0094 16.3 10.6 10 6.6 0.0 5.7 4 1 1 5 5 5 0 Lipoprotein leucine-zipper PLU-1 PF08429.11 ORF38304 - 0.014 14.6 6.7 0.34 10.0 6.6 2.4 1 1 0 1 1 1 0 PLU-1-like protein Fez1 PF06818.15 ORF38304 - 0.021 15.3 12.1 1.3 9.4 0.7 2.4 1 1 1 2 2 2 0 Fez1 RNA_pol_A_CTD PF03118.15 ORF38304 - 0.023 14.4 3.9 0.048 13.4 0.5 3.4 3 0 0 3 3 2 0 Bacterial RNA polymerase, alpha chain C terminal domain DUF2730 PF10805.8 ORF38304 - 0.023 14.8 17.6 1.1 9.4 1.6 5.2 3 1 2 5 5 5 0 Protein of unknown function (DUF2730) Baculo_PEP_C PF04513.12 ORF38304 - 0.024 14.7 14.8 1.7 8.7 1.1 4.4 2 2 2 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus SRP_SPB PF02978.19 ORF38304 - 0.026 15.1 1.1 0.1 13.2 0.2 2.5 1 1 0 2 2 1 0 Signal peptide binding domain TSC22 PF01166.18 ORF38304 - 0.033 14.5 2.5 0.033 14.5 2.5 5.9 6 1 2 8 8 6 0 TSC-22/dip/bun family Allexi_40kDa PF05549.11 ORF38304 - 0.04 13.4 9.6 1.7 8.1 0.1 3.3 1 1 3 4 4 4 0 Allexivirus 40kDa protein DUF2935 PF11155.8 ORF38304 - 0.048 14.0 0.1 3.1 8.1 0.1 2.9 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) NPV_P10 PF05531.12 ORF38304 - 0.094 13.2 21.7 15 6.1 2.1 5.8 2 2 2 4 4 4 0 Nucleopolyhedrovirus P10 protein Spectrin PF00435.21 ORF38304 - 0.099 13.1 15.3 0.42 11.1 0.6 4.6 2 2 3 5 5 5 0 Spectrin repeat FlaC_arch PF05377.11 ORF38304 - 0.1 13.0 20.6 2 8.9 0.3 6.5 4 2 1 5 5 5 0 Flagella accessory protein C (FlaC) BLOC1_2 PF10046.9 ORF38304 - 0.11 12.8 23.0 5.7 7.3 0.7 5.8 3 2 3 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Prominin PF05478.11 ORF38304 - 0.11 10.4 8.6 1.6 6.6 4.0 2.6 1 1 2 3 3 3 0 Prominin Seryl_tRNA_N PF02403.22 ORF38304 - 0.15 12.3 29.1 0.57 10.4 8.9 4.5 1 1 3 4 4 4 0 Seryl-tRNA synthetase N-terminal domain CENP-F_leu_zip PF10473.9 ORF38304 - 0.2 11.7 27.4 1.3 9.1 9.9 4.7 1 1 3 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 COG7 PF10191.9 ORF38304 - 0.22 9.7 3.4 0.31 9.2 2.6 1.6 1 1 0 1 1 1 0 Golgi complex component 7 (COG7) Gp-FAR-1 PF05823.12 ORF38304 - 0.26 11.6 15.2 0.55 10.6 0.2 3.9 2 2 2 4 4 4 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Fib_alpha PF08702.10 ORF38304 - 0.28 11.4 16.7 0.56 10.4 4.9 3.9 2 2 1 3 3 3 0 Fibrinogen alpha/beta chain family YscO PF07321.12 ORF38304 - 0.29 11.1 6.1 0.24 11.3 2.1 2.8 3 0 0 3 3 3 0 Type III secretion protein YscO ABC_tran_CTD PF16326.5 ORF38304 - 0.31 11.3 23.9 1.1 9.5 0.2 5.0 4 2 1 5 5 5 0 ABC transporter C-terminal domain Wx5_PLAF3D7 PF09688.10 ORF38304 - 0.31 11.0 6.2 0.22 11.5 2.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (Wx5_PLAF3D7) YlbD_coat PF14071.6 ORF38304 - 0.37 11.0 17.5 0.57 10.4 5.7 4.2 3 1 1 4 4 4 0 Putative coat protein DUF4407 PF14362.6 ORF38304 - 0.41 10.0 10.4 17 4.6 10.3 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF38304 - 0.51 11.0 14.2 2.2 8.9 0.1 5.4 5 2 2 7 7 5 0 SlyX COMPASS-Shg1 PF05205.12 ORF38304 - 0.61 10.8 13.0 0.9 10.3 2.4 3.3 3 0 0 3 3 3 0 COMPASS (Complex proteins associated with Set1p) component shg1 MscS_porin PF12795.7 ORF38304 - 0.69 9.4 14.7 0.065 12.8 2.1 3.5 3 1 0 4 4 4 0 Mechanosensitive ion channel porin domain Spc7 PF08317.11 ORF38304 - 0.82 8.5 24.3 0.88 8.4 0.9 3.3 2 2 0 3 3 3 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 ORF38304 - 0.9 9.1 8.0 44 3.5 8.0 2.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit ECH_2 PF16113.5 ORF38304 - 1 8.8 6.6 5.1 6.5 1.8 2.6 2 1 1 3 3 3 0 Enoyl-CoA hydratase/isomerase Com_YlbF PF06133.11 ORF38304 - 1.3 9.7 19.9 0.85 10.3 0.5 3.8 2 1 1 3 3 3 0 Control of competence regulator ComK, YlbF/YmcA DUF948 PF06103.11 ORF38304 - 1.7 9.0 14.2 5.2 7.4 3.5 4.7 3 1 2 5 5 5 0 Bacterial protein of unknown function (DUF948) DUF5082 PF16888.5 ORF38304 - 2 8.7 19.2 6.9 7.0 0.2 5.3 3 2 1 5 5 5 0 Domain of unknown function (DUF5082) FemAB PF02388.16 ORF38304 - 2.3 7.0 13.1 0.33 9.8 3.4 3.0 3 1 1 4 4 4 0 FemAB family TMPIT PF07851.13 ORF38304 - 2.4 7.3 12.2 2.4 7.3 5.9 2.9 1 1 2 3 3 3 0 TMPIT-like protein Prefoldin PF02996.17 ORF38304 - 2.5 8.0 24.0 0.23 11.4 1.5 6.7 6 2 1 7 7 7 0 Prefoldin subunit DUF2203 PF09969.9 ORF38304 - 2.7 8.7 12.0 2.4 8.9 2.6 3.5 2 2 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) ISG65-75 PF11727.8 ORF38304 - 3.1 6.9 12.2 0.26 10.5 5.8 2.3 2 1 0 2 2 2 0 Invariant surface glycoprotein HSBP1 PF06825.12 ORF38304 - 3.2 7.7 22.9 2.3 8.2 0.9 6.1 7 1 0 7 7 5 0 Heat shock factor binding protein 1 DUF4140 PF13600.6 ORF38304 - 4.1 7.9 11.7 75 3.9 0.3 4.7 2 2 2 4 4 4 0 N-terminal domain of unknown function (DUF4140) MctB PF11382.8 ORF38304 - 4.6 6.9 6.4 4.6 6.9 4.4 2.1 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB DUF3158 PF11358.8 ORF38304 - 4.9 6.9 6.1 1.5 8.5 0.4 2.8 3 1 1 4 4 4 0 Protein of unknown function (DUF3158) DASH_Dad3 PF08656.10 ORF38304 - 5.8 7.1 9.4 11 6.2 1.4 4.6 2 2 2 4 4 4 0 DASH complex subunit Dad3 IZUMO PF15005.6 ORF38304 - 6.4 7.3 9.3 9.1 6.8 0.4 3.3 2 1 0 3 3 3 0 Izumo sperm-egg fusion, Ig domain-associated AAA_5 PF07728.14 ORF37765 - 0.11 12.5 0.1 6.3 6.8 0.1 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Gly_acyl_tr_N PF06021.11 ORF37765 - 0.12 12.4 5.1 3.7 7.6 3.8 2.3 2 0 0 2 2 2 0 Aralkyl acyl-CoA:amino acid N-acyltransferase DUF4407 PF14362.6 ORF37765 - 0.77 9.1 3.3 1 8.6 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1041 PF06292.17 ORF37765 - 8.3 6.9 9.5 28 5.2 6.1 2.5 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1041) FdhE PF04216.12 ORF36795 - 1.3e-117 392.8 0.4 1.5e-117 392.6 0.4 1.0 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation DZR PF12773.7 ORF36795 - 0.021 14.9 7.5 0.45 10.6 3.1 2.7 1 1 1 2 2 2 0 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF36795 - 0.024 14.0 5.1 0.3 10.5 0.1 3.3 3 0 0 3 3 3 0 zinc-ribbon domain Elf1 PF05129.13 ORF36795 - 0.16 12.0 4.7 0.93 9.6 0.1 2.7 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like Zn_Tnp_IS1595 PF12760.7 ORF36795 - 0.44 10.6 5.8 0.64 10.0 0.3 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 ORF36795 - 0.46 10.9 7.5 9.5 6.7 7.5 2.8 1 1 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_15 PF17032.5 ORF36795 - 0.61 10.9 5.4 1.5 9.7 5.4 1.7 1 1 0 1 1 1 0 zinc-ribbon family zf-IS66 PF13005.7 ORF36795 - 0.74 10.3 7.1 8.1 6.9 4.0 2.8 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zinc_ribbon_6 PF14599.6 ORF36795 - 0.83 9.7 5.6 0.94 9.5 1.7 2.7 2 0 0 2 2 2 0 Zinc-ribbon DnaJ_CXXCXGXG PF00684.19 ORF36795 - 1.7 9.0 8.2 0.44 11.0 3.6 2.0 1 1 1 2 2 2 0 DnaJ central domain HypA PF01155.19 ORF36795 - 1.9 8.6 8.3 6.4 6.8 4.6 2.6 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbons_6 PF07191.12 ORF36795 - 2 8.4 8.4 4.5 7.3 4.7 2.4 1 1 2 3 3 3 0 zinc-ribbons Zn-ribbon_8 PF09723.10 ORF36795 - 4.7 7.4 9.0 4.5 7.5 0.1 3.1 2 1 1 3 3 3 0 Zinc ribbon domain MccV PF17508.2 ORF31631 - 0.19 12.3 10.6 0.16 12.6 7.4 2.4 1 1 1 2 2 2 0 Microcin V bacteriocin DUF456 PF04306.13 ORF31631 - 1.4 9.2 8.7 2.9 8.2 8.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Pkinase PF00069.25 ORF31447 - 7.1e-30 104.2 0.0 9.8e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF31447 - 5e-07 29.3 0.0 7.6e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4335 PF14233.6 ORF31447 - 0.00084 19.3 0.0 0.013 15.4 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) KA1 PF02149.19 ORF31447 - 0.0089 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Kinase associated domain 1 AA_permease_N PF08403.10 ORF31447 - 0.14 11.6 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Amino acid permease N-terminal MccV PF17508.2 ORF31280 - 0.19 12.3 10.6 0.16 12.6 7.4 2.4 1 1 1 2 2 2 0 Microcin V bacteriocin DUF456 PF04306.13 ORF31280 - 1.4 9.2 8.7 2.9 8.2 8.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Rad21_Rec8 PF04824.16 ORF30994 - 0.0086 15.3 0.0 0.015 14.5 0.0 1.3 1 0 0 1 1 1 1 Conserved region of Rad21 / Rec8 like protein MccV PF17508.2 ORF30152 - 0.19 12.3 10.6 0.16 12.6 7.4 2.4 1 1 1 2 2 2 0 Microcin V bacteriocin DUF456 PF04306.13 ORF30152 - 1.4 9.2 8.7 2.9 8.2 8.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) FMN_dh PF01070.18 ORF28373 - 2.4e-77 260.3 0.4 2.3e-50 171.6 0.6 2.0 1 1 1 2 2 2 2 FMN-dependent dehydrogenase Glu_synthase PF01645.17 ORF28373 - 4.5e-05 22.8 0.1 9.9e-05 21.6 0.1 1.5 1 1 0 1 1 1 1 Conserved region in glutamate synthase IMPDH PF00478.25 ORF28373 - 0.0063 15.6 7.2 0.027 13.5 2.6 2.5 2 1 1 3 3 3 2 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 ORF28373 - 0.21 10.7 0.3 0.85 8.8 0.1 1.9 1 1 0 2 2 2 0 Dihydroorotate dehydrogenase Ribonuc_red_sm PF00268.21 ORF25803 - 4e-113 377.5 0.5 4.7e-113 377.3 0.5 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain DrsE_2 PF13686.6 ORF25803 - 0.029 14.2 0.7 0.18 11.7 0.7 2.0 1 1 0 1 1 1 0 DsrE/DsrF/DrsH-like family BROMI PF14961.6 ORF25803 - 0.066 10.6 0.0 0.089 10.2 0.0 1.1 1 0 0 1 1 1 0 Broad-minded protein MccV PF17508.2 ORF24151 - 0.19 12.3 10.6 0.16 12.6 7.4 2.4 1 1 1 2 2 2 0 Microcin V bacteriocin DUF456 PF04306.13 ORF24151 - 1.4 9.2 8.7 2.9 8.2 8.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Acetyltransf_1 PF00583.25 ORF22352 - 2.7e-11 43.7 0.1 4.5e-11 43.0 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF22352 - 3.5e-08 33.8 0.2 6.4e-08 32.9 0.2 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF22352 - 4.9e-07 29.7 0.2 8.3e-07 29.0 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF22352 - 0.0012 19.0 0.4 0.0025 17.9 0.0 1.7 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 ORF22352 - 0.0027 17.7 0.0 0.0062 16.5 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_17 PF17668.1 ORF22352 - 0.011 16.5 0.1 0.029 15.2 0.1 1.7 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 ORF22352 - 0.03 14.3 0.0 0.17 11.9 0.0 2.1 2 0 0 2 2 2 0 ESCO1/2 acetyl-transferase Acetyltransf_4 PF13420.7 ORF22352 - 0.073 13.2 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain XhlA PF10779.9 ORF20599 - 0.00025 21.2 8.6 0.00025 21.2 8.6 6.2 1 1 5 7 7 7 2 Haemolysin XhlA Apolipoprotein PF01442.18 ORF20599 - 0.00039 20.3 12.0 0.00039 20.3 12.0 2.6 1 1 1 2 2 2 1 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF20599 - 0.0013 18.8 18.7 0.022 14.8 2.4 3.9 1 1 2 3 3 3 3 Baculovirus polyhedron envelope protein, PEP, C terminus DUF885 PF05960.11 ORF20599 - 0.14 11.7 16.2 5.1 6.6 16.2 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF885) DUF3584 PF12128.8 ORF20599 - 0.25 8.8 38.7 0.28 8.6 38.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF1664 PF07889.12 ORF20599 - 0.68 10.0 39.7 0.17 11.9 5.5 4.4 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) Phasin PF05597.11 ORF20599 - 2 8.4 30.7 0.18 11.8 3.7 4.1 1 1 3 4 4 4 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Spc7 PF08317.11 ORF20599 - 3.1 6.6 44.2 1.9 7.3 15.8 2.6 1 1 2 3 3 3 0 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF20599 - 3.2 8.0 41.1 0.25 11.5 9.1 3.8 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 ApoO PF09769.9 ORF20599 - 5.8 6.9 11.7 1.7 8.6 1.2 3.9 1 1 2 3 3 3 0 Apolipoprotein O DUF4041 PF13250.6 ORF20599 - 7 6.6 13.6 0.35 10.8 0.2 4.4 3 2 2 5 5 5 0 Domain of unknown function (DUF4041) Peptidase_C1 PF00112.23 ORF19342 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF19342 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF19342 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family TPH PF13868.6 ORF18944 - 9.2e-13 47.4 108.8 1e-12 47.3 108.8 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain SDH_alpha PF03313.15 ORF18647 - 1.9e-77 260.5 11.5 2.3e-77 260.2 11.5 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain CS PF04969.16 ORF11204 - 0.00051 21.0 0.0 0.00076 20.5 0.0 1.3 1 0 0 1 1 1 1 CS domain CTD_bind PF04818.13 ORF111981 - 0.24 12.2 4.4 0.86 10.5 0.5 3.3 3 0 0 3 3 3 0 RNA polymerase II-binding domain. DivIC PF04977.15 ORF111976 - 0.0053 16.5 3.7 0.0053 16.5 3.7 3.6 2 1 1 3 3 3 1 Septum formation initiator CENP-F_leu_zip PF10473.9 ORF111976 - 0.013 15.6 9.5 0.013 15.6 9.5 2.8 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlaC_arch PF05377.11 ORF111976 - 0.013 15.9 5.4 0.013 15.9 5.4 2.7 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) YabA PF06156.13 ORF111976 - 0.017 15.7 4.2 0.017 15.7 4.2 2.7 2 1 0 2 2 2 0 Initiation control protein YabA V-SNARE_C PF12352.8 ORF111976 - 0.02 15.2 0.2 0.063 13.6 0.2 1.9 1 0 0 1 1 1 0 Snare region anchored in the vesicle membrane C-terminus Fzo_mitofusin PF04799.13 ORF111976 - 0.95 9.0 18.6 3.6 7.1 9.0 2.3 1 1 2 3 3 3 0 fzo-like conserved region AIF-MLS PF14962.6 ORF111976 - 2.5 8.0 6.6 6.9 6.6 6.5 1.7 1 1 0 1 1 1 0 Mitochondria Localisation Sequence bZIP_1 PF00170.21 ORF111976 - 5.8 7.1 17.9 1.5 9.0 6.6 3.3 2 2 1 3 3 3 0 bZIP transcription factor DUF725 PF05267.12 ORF111976 - 6.5 6.8 12.1 1.2 9.2 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF725) LysR_substrate PF03466.20 ORF111879 - 6.2e-39 133.5 0.0 8.9e-39 133.0 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF111879 - 1e-19 70.2 0.6 1.7e-19 69.5 0.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family P22_Cro PF14549.6 ORF111879 - 0.11 12.4 0.1 2.3 8.1 0.1 2.3 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro Peptidase_C1 PF00112.23 ORF105376 - 3.4e-59 200.6 6.2 3.4e-59 200.6 6.2 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF105376 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF105376 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family VWD PF00094.25 ORF104720 - 0.0015 18.8 0.1 0.0027 18.0 0.1 1.6 1 1 0 1 1 1 1 von Willebrand factor type D domain Glyco_hydro_61 PF03443.14 ORF104517 - 3.9e-09 36.8 0.0 5.9e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 61 LPMO_10 PF03067.15 ORF104517 - 1.8e-08 35.3 0.1 3.1e-08 34.5 0.1 1.4 1 0 0 1 1 1 1 Lytic polysaccharide mono-oxygenase, cellulose-degrading RsfS PF02410.15 ORF103438 - 3.4e-18 65.9 0.0 5e-18 65.4 0.0 1.3 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation Pkinase PF00069.25 ORF103321 - 3.6e-23 82.3 0.0 1.9e-22 79.9 0.0 2.1 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF103321 - 4.3e-06 26.2 0.0 1.3e-05 24.7 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase NAD_binding_10 PF13460.6 ORF102345 - 0.013 15.4 0.0 0.024 14.5 0.0 1.4 1 0 0 1 1 1 0 NAD(P)H-binding Pkinase PF00069.25 ORF101766 - 7.1e-30 104.2 0.0 9.8e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101766 - 5e-07 29.3 0.0 7.6e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4335 PF14233.6 ORF101766 - 0.00084 19.3 0.0 0.013 15.4 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) KA1 PF02149.19 ORF101766 - 0.0089 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Kinase associated domain 1 AA_permease_N PF08403.10 ORF101766 - 0.14 11.6 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Amino acid permease N-terminal RNB PF00773.19 ORF100643 - 1.6e-15 57.3 0.1 2.3e-15 56.7 0.1 1.2 1 0 0 1 1 1 1 RNB domain DUF2870 PF11069.8 NODE_21896_length_925_cov_279.921348_g3994_i1reverse_frame_2 - 0.037 14.4 2.2 0.07 13.5 2.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2870) PEGSRP PF07623.11 NODE_21882_length_926_cov_2.806958_g16885_i0reverse_frame_3 - 0.99 9.3 5.9 0.66 9.8 3.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1584) Pyr_redox_2 PF07992.14 NODE_21882_length_926_cov_2.806958_g16885_i0reverse_frame_2 - 5.3e-10 39.0 0.1 7.3e-10 38.6 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ComR_TPR PF18710.1 NODE_21871_length_926_cov_94.975309_g16874_i0forward_frame_3 - 0.014 15.0 0.6 0.031 13.8 0.1 1.7 2 0 0 2 2 2 0 ComR tetratricopeptide G-patch PF01585.23 ORF97745 - 1e-13 50.9 1.7 1.9e-13 50.1 1.7 1.4 1 0 0 1 1 1 1 G-patch domain RRM_1 PF00076.22 ORF97745 - 3.8e-05 23.4 0.1 7.4e-05 22.5 0.1 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) G-patch_2 PF12656.7 ORF97745 - 0.00022 21.2 1.9 0.00051 20.1 1.5 1.9 1 1 0 1 1 1 1 G-patch domain RBM39linker PF15519.6 ORF97745 - 3.5 8.8 9.8 3.1 9.0 0.1 3.2 2 1 1 3 3 3 0 linker between RRM2 and RRM3 domains in RBM39 protein S1-P1_nuclease PF02265.16 ORF96791 - 3e-51 174.7 1.0 3.4e-51 174.5 1.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease adh_short PF00106.25 ORF96691 - 7e-30 103.9 0.2 9.4e-30 103.5 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF96691 - 4.5e-20 72.2 0.0 6e-20 71.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF96691 - 3.6e-06 27.0 0.0 5.9e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF96691 - 0.00023 20.8 0.3 0.00033 20.3 0.3 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF96691 - 0.00086 19.0 0.1 0.03 13.9 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NleF_casp_inhib PF16809.5 ORF96691 - 0.0053 16.7 1.2 0.0077 16.2 1.2 1.2 1 0 0 1 1 1 1 NleF caspase inhibitor GxDLY PF14607.6 ORF96691 - 0.016 15.0 0.4 0.035 13.9 0.0 1.7 2 0 0 2 2 2 0 N-terminus of Esterase_SGNH_hydro-type 3HCDH_N PF02737.18 ORF96691 - 0.022 14.6 0.1 0.036 13.9 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ThiF PF00899.21 ORF96691 - 0.037 13.4 0.1 7.7 5.8 0.0 2.1 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF96691 - 0.049 13.6 0.1 0.099 12.6 0.1 1.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LytR_C PF13399.6 ORF96691 - 0.15 13.1 0.0 0.27 12.2 0.0 1.5 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator zf-CCCH PF00642.24 ORF93226 - 1e-07 31.6 2.2 1e-07 31.6 2.2 2.0 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF93226 - 0.00017 21.5 8.4 0.00017 21.5 8.4 1.8 2 0 0 2 2 2 1 Zinc finger domain RRM_1 PF00076.22 ORF93226 - 0.00017 21.3 0.0 0.00028 20.7 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCCH_4 PF18044.1 ORF93226 - 0.14 12.0 6.1 0.066 13.0 3.6 1.8 2 0 0 2 2 2 0 CCCH-type zinc finger Torus PF16131.5 ORF93226 - 0.21 12.3 2.1 0.51 11.0 0.1 2.3 2 1 0 2 2 2 0 Torus domain Methyltransf_10 PF05971.12 ORF93185 - 3.5e-154 512.5 0.0 4.1e-154 512.3 0.0 1.0 1 0 0 1 1 1 1 RNA methyltransferase MTS PF05175.14 ORF93185 - 5.3e-05 22.8 0.0 0.00014 21.5 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 ORF93185 - 0.017 15.0 0.0 0.034 14.0 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain TetR_C_31 PF17940.1 ORF93185 - 0.16 12.2 0.1 0.4 10.9 0.1 1.7 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain RCC1 PF00415.18 ORF91700 - 2.5e-40 136.9 14.0 2e-10 41.1 0.3 5.8 6 0 0 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF91700 - 1.3e-31 107.7 15.9 1.4e-12 47.1 0.3 5.4 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat adh_short PF00106.25 ORF90735 - 3.5e-30 104.9 0.2 4.7e-30 104.5 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF90735 - 4.9e-20 72.1 0.0 6.5e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF90735 - 3.2e-06 27.2 0.0 5.2e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF90735 - 0.00019 21.1 0.3 0.00027 20.6 0.3 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF90735 - 0.00052 19.7 0.1 0.018 14.7 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NleF_casp_inhib PF16809.5 ORF90735 - 0.0037 17.2 1.1 0.0053 16.7 1.1 1.2 1 0 0 1 1 1 1 NleF caspase inhibitor GxDLY PF14607.6 ORF90735 - 0.012 15.4 0.4 0.027 14.3 0.0 1.7 2 0 0 2 2 2 0 N-terminus of Esterase_SGNH_hydro-type 3HCDH_N PF02737.18 ORF90735 - 0.019 14.9 0.1 0.03 14.2 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF90735 - 0.051 13.6 0.1 0.11 12.4 0.1 1.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF90735 - 0.056 12.8 0.1 5.8 6.2 0.0 2.1 1 1 1 2 2 2 0 ThiF family Sacchrp_dh_NADP PF03435.18 ORF90735 - 0.1 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain LysR_substrate PF03466.20 ORF8787 - 1.5e-20 73.5 0.1 2.1e-20 73.0 0.1 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF8787 - 6.3e-20 70.9 0.7 1.5e-19 69.7 0.7 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 ORF8787 - 0.00015 21.5 0.2 0.00037 20.2 0.2 1.7 1 1 0 1 1 1 1 PucR C-terminal helix-turn-helix domain CRIC_ras_sig PF10534.9 ORF8787 - 0.059 13.5 0.3 4.9 7.4 0.0 2.3 1 1 0 2 2 2 0 Connector enhancer of kinase suppressor of ras Peptidase_C1 PF00112.23 ORF86435 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF86435 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF86435 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family Aa_trans PF01490.18 ORF85660 - 2.3e-18 66.1 5.4 2.3e-18 66.1 5.4 2.2 2 1 0 2 2 2 1 Transmembrane amino acid transporter protein AAA PF00004.29 ORF85143 - 3.7e-05 24.2 0.2 0.00038 20.9 0.0 2.6 1 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Peptidase_S46 PF10459.9 ORF85143 - 0.048 12.3 1.4 0.077 11.6 1.4 1.3 1 0 0 1 1 1 0 Peptidase S46 Peptidase_C1 PF00112.23 ORF84128 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF84128 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF84128 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family Exostosin PF03016.15 ORF81872 - 4.4e-18 65.5 0.0 7.5e-18 64.8 0.0 1.3 1 0 0 1 1 1 1 Exostosin family Enolase_like_N PF18374.1 ORF81872 - 0.056 12.8 0.2 0.11 12.0 0.2 1.5 1 0 0 1 1 1 0 Enolase N-terminal domain-like GP88 PF17338.2 ORF81872 - 0.18 11.2 0.0 0.29 10.6 0.0 1.2 1 0 0 1 1 1 0 Gene product 88 Metallophos PF00149.28 ORF81210 - 7.4e-36 124.6 0.4 1e-35 124.1 0.4 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF81210 - 8.2e-12 45.4 0.1 1.6e-11 44.5 0.1 1.5 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Metallophos PF00149.28 ORF80801 - 2.4e-09 38.0 0.0 2.9e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase S1-P1_nuclease PF02265.16 ORF79449 - 3e-51 174.7 1.0 3.4e-51 174.5 1.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Ank_4 PF13637.6 ORF77537 - 9.7e-21 73.9 4.2 3.5e-06 27.5 0.1 5.1 3 2 2 5 5 5 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF77537 - 1.6e-20 73.5 1.8 8.5e-06 26.3 0.2 4.0 2 2 2 4 4 4 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF77537 - 2.9e-18 65.4 0.6 0.011 16.2 0.0 6.8 7 0 0 7 7 7 4 Ankyrin repeat Ank_3 PF13606.6 ORF77537 - 6.6e-15 53.7 1.2 0.13 12.9 0.0 7.4 9 0 0 9 9 9 4 Ankyrin repeat Ank_5 PF13857.6 ORF77537 - 2.1e-11 43.8 4.2 0.001 19.3 0.2 4.4 3 2 2 5 5 5 4 Ankyrin repeats (many copies) Peptidase_C1 PF00112.23 ORF75529 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF75529 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF75529 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family ABC_tran PF00005.27 ORF73117 - 1.2e-19 71.2 0.1 2.8e-18 66.7 0.0 2.3 2 0 0 2 2 2 1 ABC transporter ABC_membrane PF00664.23 ORF73117 - 8.8e-18 64.9 1.9 1.1e-17 64.6 1.9 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region RsgA_GTPase PF03193.16 ORF73117 - 0.00015 21.7 0.0 0.00026 21.0 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 ORF73117 - 0.0022 18.5 1.7 0.0022 18.5 1.7 2.4 1 1 1 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF73117 - 0.0033 17.1 0.0 0.007 16.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain LptE PF04390.12 ORF73117 - 0.0038 17.9 0.1 0.031 15.0 0.0 2.1 2 0 0 2 2 2 1 Lipopolysaccharide-assembly AAA_24 PF13479.6 ORF73117 - 0.0055 16.5 0.0 0.013 15.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 ORF73117 - 0.007 16.1 0.1 0.007 16.1 0.1 2.5 2 1 1 3 3 3 1 AAA ATPase domain AAA PF00004.29 ORF73117 - 0.033 14.6 0.0 0.15 12.5 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF73117 - 0.035 14.5 0.0 0.065 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain SMC_N PF02463.19 ORF73117 - 0.046 13.1 3.1 2.5 7.5 0.0 2.6 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain ATP-synt_ab PF00006.25 ORF73117 - 0.051 13.2 0.0 0.082 12.5 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Zeta_toxin PF06414.12 ORF73117 - 0.065 12.5 0.0 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_21 PF13304.6 ORF73117 - 0.94 9.2 4.9 0.32 10.8 0.1 2.3 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system WD40 PF00400.32 ORF72447 - 6.2e-07 30.0 0.2 0.0015 19.3 0.1 2.6 2 0 0 2 2 2 2 WD domain, G-beta repeat UTP15_C PF09384.10 ORF72447 - 0.0041 16.8 0.5 0.014 15.0 0.2 2.0 2 1 1 3 3 3 2 UTP15 C terminal CDC37_M PF08565.11 ORF72447 - 0.014 15.3 0.4 0.031 14.2 0.4 1.6 1 1 0 1 1 1 0 Cdc37 Hsp90 binding domain DUF445 PF04286.12 ORF72447 - 0.076 12.8 3.3 0.088 12.6 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) FliT PF05400.13 ORF72447 - 0.66 10.8 3.3 0.43 11.4 1.2 1.8 2 0 0 2 2 2 0 Flagellar protein FliT adh_short PF00106.25 ORF64419 - 3.5e-30 104.9 0.2 4.7e-30 104.5 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF64419 - 4.9e-20 72.1 0.0 6.5e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF64419 - 3.2e-06 27.2 0.0 5.2e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF64419 - 0.00019 21.1 0.3 0.00027 20.6 0.3 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF64419 - 0.00052 19.7 0.1 0.018 14.7 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NleF_casp_inhib PF16809.5 ORF64419 - 0.0037 17.2 1.1 0.0053 16.7 1.1 1.2 1 0 0 1 1 1 1 NleF caspase inhibitor GxDLY PF14607.6 ORF64419 - 0.012 15.4 0.4 0.027 14.3 0.0 1.7 2 0 0 2 2 2 0 N-terminus of Esterase_SGNH_hydro-type 3HCDH_N PF02737.18 ORF64419 - 0.019 14.9 0.1 0.03 14.2 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF64419 - 0.051 13.6 0.1 0.11 12.4 0.1 1.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF64419 - 0.056 12.8 0.1 5.8 6.2 0.0 2.1 1 1 1 2 2 2 0 ThiF family Sacchrp_dh_NADP PF03435.18 ORF64419 - 0.1 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain AAA_21 PF13304.6 ORF60048 - 2.6e-08 34.0 0.0 4.3e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF60048 - 1e-06 29.3 0.0 2.2e-06 28.3 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF60048 - 0.001 18.5 0.0 0.0013 18.2 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF60048 - 0.061 13.6 0.1 0.33 11.2 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Exonuc_VII_S PF02609.16 ORF57751 - 0.0039 17.2 1.2 0.0085 16.1 0.2 2.2 2 1 0 2 2 2 1 Exonuclease VII small subunit COG2 PF06148.11 ORF57751 - 0.25 11.4 4.0 1.2 9.3 2.6 2.5 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Ras PF00071.22 ORF52785 - 1.5e-38 132.0 0.0 1.9e-38 131.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF52785 - 8.7e-20 71.1 0.0 1.4e-19 70.5 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF52785 - 6.1e-10 38.8 0.0 1e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF52785 - 2.8e-06 27.4 0.0 4.2e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase SAP PF02037.27 ORF52785 - 0.0053 16.5 0.5 0.09 12.6 0.2 2.3 2 0 0 2 2 2 1 SAP domain HeH PF12949.7 ORF52785 - 0.015 15.0 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 HeH/LEM domain Armet PF10208.9 ORF52785 - 0.056 13.4 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding AAA_33 PF13671.6 ORF52785 - 0.12 12.6 0.0 0.29 11.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF52785 - 0.15 12.3 0.0 0.87 9.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain EF-hand_6 PF13405.6 ORF52785 - 0.16 12.0 0.1 20 5.4 0.1 2.6 2 0 0 2 2 2 0 EF-hand domain DNA_ligase_A_C PF04679.15 ORF52723 - 0.18 12.4 2.4 0.85 10.2 0.1 2.6 2 1 1 3 3 3 0 ATP dependent DNA ligase C terminal region RNA_pol_Rpb1_5 PF04998.17 ORF51056 - 1.3e-49 169.1 0.1 2e-49 168.5 0.1 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_7 PF04990.12 ORF51056 - 1.1e-29 103.2 5.3 1.1e-29 103.2 5.3 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 7 MmgE_PrpD PF03972.14 ORF34859 - 7.4e-09 34.7 0.0 1e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 MmgE/PrpD family Kelch_1 PF01344.25 ORF33118 - 1.9e-31 107.3 8.9 2.2e-09 36.7 0.0 5.5 6 0 0 6 6 6 4 Kelch motif Kelch_6 PF13964.6 ORF33118 - 1.6e-20 72.6 5.7 4e-05 23.7 0.0 5.5 3 2 3 6 6 6 4 Kelch motif Kelch_4 PF13418.6 ORF33118 - 1.8e-15 56.7 9.2 2.7e-07 30.5 0.8 4.3 3 1 1 4 4 4 4 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF33118 - 2.8e-15 55.6 5.6 3e-05 23.8 0.0 5.3 5 1 0 5 5 5 4 Kelch motif Kelch_5 PF13854.6 ORF33118 - 2.4e-14 52.9 6.6 5.7e-05 23.0 0.0 4.3 5 0 0 5 5 5 3 Kelch motif Kelch_3 PF13415.6 ORF33118 - 5e-07 29.8 11.9 0.28 11.5 0.4 5.4 5 0 0 5 5 5 4 Galactose oxidase, central domain Peptidase_C1 PF00112.23 ORF32103 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF32103 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF32103 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family Ras PF00071.22 ORF30978 - 1.5e-38 132.0 0.0 1.9e-38 131.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF30978 - 8.7e-20 71.1 0.0 1.4e-19 70.5 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF30978 - 6.1e-10 38.8 0.0 1e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF30978 - 2.8e-06 27.4 0.0 4.2e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase SAP PF02037.27 ORF30978 - 0.0053 16.5 0.5 0.09 12.6 0.2 2.3 2 0 0 2 2 2 1 SAP domain HeH PF12949.7 ORF30978 - 0.015 15.0 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 HeH/LEM domain Armet PF10208.9 ORF30978 - 0.056 13.4 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding AAA_33 PF13671.6 ORF30978 - 0.12 12.6 0.0 0.29 11.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF30978 - 0.15 12.3 0.0 0.87 9.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain EF-hand_6 PF13405.6 ORF30978 - 0.16 12.0 0.1 20 5.4 0.1 2.6 2 0 0 2 2 2 0 EF-hand domain Peptidase_C1 PF00112.23 ORF3090 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF3090 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF3090 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family Zip PF02535.22 ORF26215 - 1.2e-42 146.3 12.6 6.4e-41 140.7 12.6 2.0 1 1 0 1 1 1 1 ZIP Zinc transporter DUF4535 PF15054.6 ORF26215 - 0.13 12.1 0.0 0.34 10.7 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4535) R2K_3 PF14243.6 ORF22820 - 3e-18 66.6 0.2 4e-18 66.2 0.2 1.2 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 3 R2K_2 PF18299.1 ORF22820 - 8.3e-09 35.5 0.0 1.4e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 2 Peptidase_A25 PF03418.14 ORF22820 - 0.0054 15.7 0.0 0.0077 15.2 0.0 1.1 1 0 0 1 1 1 1 Germination protease tRNA-synt_2 PF00152.20 ORF20349 - 8.2e-73 245.2 0.1 9.4e-73 245.0 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF20349 - 2.7e-05 23.8 0.2 0.16 11.5 0.1 2.6 2 1 1 3 3 3 2 tRNA synthetases class II core domain (F) ABC_tran PF00005.27 ORF18539 - 4.9e-30 104.8 0.0 7.6e-30 104.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF18539 - 4.1e-07 30.1 0.3 0.013 15.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 ORF18539 - 0.00014 22.3 0.1 0.00032 21.1 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain CBS PF00571.28 ORF18539 - 0.0006 20.2 0.1 0.004 17.6 0.0 2.4 3 0 0 3 3 2 1 CBS domain AAA_15 PF13175.6 ORF18539 - 0.00067 19.5 0.0 0.00091 19.0 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF18539 - 0.00076 19.2 0.0 0.0016 18.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF18539 - 0.0032 17.4 0.1 0.0057 16.6 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 ORF18539 - 0.0036 17.6 0.1 0.0098 16.2 0.0 1.8 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF18539 - 0.0038 16.9 0.1 0.0075 16.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.12 ORF18539 - 0.0063 15.8 0.0 0.012 14.9 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin G-alpha PF00503.20 ORF18539 - 0.013 14.7 0.0 0.016 14.4 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit SMC_N PF02463.19 ORF18539 - 0.017 14.6 0.1 0.96 8.8 0.1 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_28 PF13521.6 ORF18539 - 0.074 13.3 0.2 0.32 11.2 0.0 2.1 3 0 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 ORF18539 - 0.16 11.8 0.0 0.77 9.6 0.0 1.9 2 0 0 2 2 2 0 NTPase DUF87 PF01935.17 ORF18539 - 0.21 11.6 0.1 0.39 10.8 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain UbiA PF01040.18 ORF18439 - 4e-38 131.2 17.6 4e-38 131.2 17.6 1.5 1 1 1 2 2 2 1 UbiA prenyltransferase family Pkinase PF00069.25 ORF106528 - 7.1e-31 107.5 0.0 1.3e-30 106.7 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF106528 - 2.8e-09 36.7 0.3 1.2e-08 34.6 0.1 2.0 2 1 0 2 2 2 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF106528 - 0.0002 20.5 0.2 0.00041 19.4 0.0 1.5 2 0 0 2 2 2 1 Haspin like kinase domain Choline_kinase PF01633.20 ORF106528 - 0.014 15.0 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase APH PF01636.23 ORF106528 - 0.054 13.4 1.9 1.5 8.6 0.2 3.0 3 1 0 3 3 3 0 Phosphotransferase enzyme family adh_short PF00106.25 ORF105610 - 4.8e-30 104.5 0.2 6.4e-30 104.1 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF105610 - 1.7e-19 70.4 0.0 2.2e-19 69.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF105610 - 1.1e-05 25.4 0.0 1.8e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 ORF105610 - 0.00022 20.9 0.1 0.0075 15.9 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 ORF105610 - 0.00054 19.6 0.3 0.00078 19.1 0.3 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GxDLY PF14607.6 ORF105610 - 0.0081 16.0 0.3 0.018 14.8 0.0 1.7 2 0 0 2 2 2 1 N-terminus of Esterase_SGNH_hydro-type NleF_casp_inhib PF16809.5 ORF105610 - 0.015 15.2 0.6 0.022 14.7 0.6 1.2 1 0 0 1 1 1 0 NleF caspase inhibitor 3HCDH_N PF02737.18 ORF105610 - 0.057 13.3 0.1 0.093 12.6 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF105610 - 0.061 13.3 0.1 0.14 12.2 0.1 1.5 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF105610 - 0.085 12.2 0.1 8.9 5.6 0.0 2.1 1 1 1 2 2 2 0 ThiF family MotB_plug PF13677.6 ORF101484 - 1.4e-19 69.4 0.3 2.3e-19 68.7 0.3 1.4 1 0 0 1 1 1 1 Membrane MotB of proton-channel complex MotA/MotB OmpA PF00691.20 ORF101484 - 1.2e-12 48.0 0.0 2.2e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 OmpA family Glyco_hydro_8 PF01270.17 ORF10145 - 1e-118 396.1 1.6 1.2e-118 395.9 1.6 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 8 DUF3788 PF12663.7 ORF10145 - 0.12 12.4 0.1 0.24 11.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3788) DUF1943 PF09172.11 ORF10129 - 0.097 11.9 1.5 0.19 11.0 1.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) zf-C2H2 PF00096.26 NODE_22051_length_920_cov_3646.884746_g16201_i4reverse_frame_1 - 6.6e-08 32.6 13.0 0.0014 19.0 0.9 4.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_22051_length_920_cov_3646.884746_g16201_i4reverse_frame_1 - 0.00038 21.1 10.7 0.0077 17.0 0.7 3.8 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_22051_length_920_cov_3646.884746_g16201_i4reverse_frame_1 - 0.053 14.0 0.1 0.053 14.0 0.1 3.7 3 0 0 3 3 3 0 Zinc-finger double domain zf-C2H2_8 PF15909.5 NODE_22051_length_920_cov_3646.884746_g16201_i4reverse_frame_1 - 0.62 10.4 6.1 2.6 8.4 2.6 2.6 1 1 1 2 2 2 0 C2H2-type zinc ribbon Ion_trans PF00520.31 NODE_22010_length_922_cov_102.039459_g16992_i0reverse_frame_3 - 1.7e-18 66.8 8.0 2.4e-18 66.3 8.0 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_8 PF13833.6 NODE_22010_length_922_cov_102.039459_g16992_i0reverse_frame_3 - 3.3e-06 26.8 0.1 6.4e-06 25.9 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_22010_length_922_cov_102.039459_g16992_i0reverse_frame_3 - 0.00011 21.4 0.1 0.00036 19.9 0.1 1.9 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_22010_length_922_cov_102.039459_g16992_i0reverse_frame_3 - 0.00036 20.2 0.0 0.0019 18.0 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 NODE_22010_length_922_cov_102.039459_g16992_i0reverse_frame_3 - 0.0014 18.0 0.0 0.003 17.0 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 NODE_22010_length_922_cov_102.039459_g16992_i0reverse_frame_3 - 0.025 15.0 0.1 0.046 14.2 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_4 PF12763.7 NODE_22010_length_922_cov_102.039459_g16992_i0reverse_frame_3 - 0.047 13.7 0.1 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF2207 PF09972.9 NODE_22010_length_922_cov_102.039459_g16992_i0reverse_frame_3 - 0.38 9.5 1.0 0.54 9.0 1.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DDE_3 PF13358.6 NODE_21975_length_923_cov_214.902027_g16967_i0reverse_frame_3 - 0.017 14.9 0.0 0.032 14.0 0.0 1.5 1 0 0 1 1 1 0 DDE superfamily endonuclease SF-assemblin PF06705.11 NODE_21975_length_923_cov_214.902027_g16967_i0reverse_frame_3 - 1.9 7.8 11.6 0.13 11.6 6.0 1.7 2 0 0 2 2 2 0 SF-assemblin/beta giardin MerT PF02411.15 NODE_21975_length_923_cov_214.902027_g16967_i0forward_frame_2 - 0.15 12.1 5.0 0.32 11.0 5.0 1.5 1 0 0 1 1 1 0 MerT mercuric transport protein GcpE PF04551.14 ORF97750 - 8.6e-108 360.5 0.0 9.8e-108 360.4 0.0 1.0 1 0 0 1 1 1 1 GcpE protein PDZ_3 PF17815.1 ORF94149 - 8.4e-25 87.3 0.0 1.3e-24 86.7 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 ORF94149 - 0.099 13.0 0.0 0.39 11.1 0.0 2.0 2 1 0 2 2 2 0 PDZ domain DOMON PF03351.17 ORF93406 - 3.1e-10 40.3 0.0 4.3e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 DOMON domain BSD PF03909.17 ORF92969 - 1.1e-05 25.4 2.1 0.062 13.3 0.2 2.6 2 0 0 2 2 2 2 BSD domain SecIII_SopE_N PF05364.14 ORF92969 - 0.087 12.9 0.1 0.17 12.0 0.1 1.5 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus YjbR PF04237.13 ORF92969 - 0.11 13.0 0.0 0.45 11.1 0.0 1.9 2 0 0 2 2 2 0 YjbR Aldo_ket_red PF00248.21 ORF89151 - 1.8e-46 158.7 0.0 6.1e-45 153.7 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Waikav_capsid_1 PF12264.8 ORF89151 - 0.073 12.6 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Waikavirus capsid protein 1 Palm_thioest PF02089.15 ORF88518 - 3.5e-46 158.0 0.1 4e-46 157.8 0.1 1.1 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF88518 - 0.00016 21.3 0.0 0.00026 20.6 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 ORF88518 - 0.00027 20.7 0.0 0.00054 19.8 0.0 1.5 1 1 0 1 1 1 1 PGAP1-like protein TRIF-NTD PF17798.1 ORF88518 - 0.0062 16.7 0.0 0.0097 16.0 0.0 1.2 1 0 0 1 1 1 1 TRIF N-terminal domain Abhydrolase_1 PF00561.20 ORF88518 - 0.0063 16.2 0.0 0.011 15.4 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold RE_CfrBI PF09516.10 ORF88518 - 0.015 14.7 0.1 0.026 13.9 0.1 1.3 1 0 0 1 1 1 0 CfrBI restriction endonuclease 2OG-FeII_Oxy_3 PF13640.6 ORF86139 - 0.0016 19.3 0.0 0.0037 18.1 0.0 1.6 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Palm_thioest PF02089.15 ORF83697 - 3.5e-46 158.0 0.1 4e-46 157.8 0.1 1.1 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF83697 - 0.00016 21.3 0.0 0.00026 20.6 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 ORF83697 - 0.00027 20.7 0.0 0.00054 19.8 0.0 1.5 1 1 0 1 1 1 1 PGAP1-like protein TRIF-NTD PF17798.1 ORF83697 - 0.0062 16.7 0.0 0.0097 16.0 0.0 1.2 1 0 0 1 1 1 1 TRIF N-terminal domain Abhydrolase_1 PF00561.20 ORF83697 - 0.0063 16.2 0.0 0.011 15.4 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold RE_CfrBI PF09516.10 ORF83697 - 0.015 14.7 0.1 0.026 13.9 0.1 1.3 1 0 0 1 1 1 0 CfrBI restriction endonuclease Treacle PF03546.14 ORF77935 - 0.17 10.6 4.5 0.27 10.0 0.5 2.1 2 0 0 2 2 2 0 Treacher Collins syndrome protein Treacle Zein-binding PF04576.15 ORF76061 - 0.24 11.7 2.9 0.19 12.0 0.7 2.0 2 0 0 2 2 2 0 Zein-binding Cep57_MT_bd PF06657.13 ORF76061 - 3.7 8.1 8.0 0.6 10.6 0.6 3.2 2 1 2 4 4 4 0 Centrosome microtubule-binding domain of Cep57 RPN7 PF10602.9 ORF76061 - 6.4 6.4 7.3 1.1 8.9 0.7 2.5 2 1 1 3 3 3 0 26S proteasome subunit RPN7 TraB PF01963.17 ORF74898 - 0.0083 16.1 0.1 0.016 15.1 0.1 1.4 1 0 0 1 1 1 1 TraB family Homeodomain PF00046.29 ORF72643 - 0.019 14.8 1.3 0.044 13.6 1.3 1.7 1 0 0 1 1 1 0 Homeodomain FliE PF02049.18 ORF70535 - 0.1 12.7 0.1 0.36 11.0 0.1 1.9 1 0 0 1 1 1 0 Flagellar hook-basal body complex protein FliE TPT PF03151.16 ORF69457 - 1.1e-28 100.4 7.7 1.3e-28 100.2 7.7 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF69457 - 0.00092 19.4 25.5 0.07 13.3 7.0 2.2 2 0 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 ORF69457 - 0.0024 17.1 11.5 0.0046 16.2 11.5 1.6 1 1 0 1 1 1 1 UAA transporter family ATP-synt_I PF03899.15 ORF69457 - 0.074 13.4 0.1 0.074 13.4 0.1 3.3 3 1 0 3 3 3 0 ATP synthase I chain DUF3584 PF12128.8 ORF69351 - 0.017 12.7 29.0 0.016 12.8 9.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) CdvA PF18822.1 ORF69351 - 0.023 14.5 1.8 0.023 14.5 1.8 4.0 2 2 1 3 3 3 0 CdvA-like coiled-coil domain bZIP_1 PF00170.21 ORF69351 - 0.026 14.6 1.5 0.026 14.6 1.5 4.8 3 2 2 5 5 5 0 bZIP transcription factor Cnn_1N PF07989.11 ORF69351 - 0.28 11.4 28.7 0.1 12.8 4.8 4.6 2 2 3 5 5 5 0 Centrosomin N-terminal motif 1 Spc7 PF08317.11 ORF69351 - 0.31 9.9 34.0 0.12 11.2 10.2 2.4 2 1 0 2 2 2 0 Spc7 kinetochore protein MscS_porin PF12795.7 ORF69351 - 0.44 10.1 44.0 0.49 9.9 20.1 2.3 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain Nup54_57_C PF18570.1 ORF69351 - 1.7 8.3 6.0 1.1 9.0 0.3 2.9 3 0 0 3 3 3 0 NUP57/Nup54 C-terminal domain DUF1664 PF07889.12 ORF69351 - 2.6 8.1 15.6 10 6.2 0.5 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) PIN_8 PF18476.1 ORF69351 - 5.1 6.9 14.3 8.5 6.2 2.1 2.4 2 0 0 2 2 2 0 PIN like domain Cep57_MT_bd PF06657.13 ORF69351 - 7 7.2 27.2 0.63 10.5 5.1 4.6 2 2 1 4 4 4 0 Centrosome microtubule-binding domain of Cep57 PRKG1_interact PF15898.5 ORF69351 - 7.7 7.5 36.8 3.1 8.7 6.6 4.0 3 1 1 4 4 4 0 cGMP-dependent protein kinase interacting domain Band_7 PF01145.25 ORF6680 - 5.8e-15 55.7 0.0 9.4e-15 55.1 0.0 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family DUF3149 PF11346.8 ORF6680 - 1.7 8.3 5.0 3.2 7.4 5.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) AIRS_C PF02769.22 ORF65219 - 4.1e-40 137.4 0.0 6.3e-40 136.8 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF65219 - 1.3e-15 57.8 0.3 2.4e-15 57.0 0.3 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks49.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks49.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks49.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks49.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Sulfatase PF00884.23 ORF10240 - 1.5e-81 274.1 0.3 1.9e-81 273.8 0.3 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF10240 - 0.013 15.1 4.6 0.046 13.3 3.0 2.3 1 1 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4994 PF16385.5 ORF10240 - 0.021 14.8 0.0 0.069 13.1 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function DUF4976 PF16347.5 ORF10240 - 0.072 13.4 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) DnaJ PF00226.31 ORF60103 - 6.5e-21 74.2 0.7 2.2e-20 72.6 0.2 2.2 2 0 0 2 2 2 1 DnaJ domain TPR_19 PF14559.6 ORF60103 - 3.5e-09 37.0 11.5 6.1e-06 26.7 0.1 4.6 3 2 2 5 5 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF60103 - 3.9e-07 29.7 9.6 0.016 15.3 0.9 4.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF60103 - 4.5e-07 29.4 0.2 0.0045 16.8 0.2 2.9 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF60103 - 0.00014 22.0 0.1 0.055 13.9 0.1 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF60103 - 0.00016 22.3 15.8 0.0014 19.2 5.6 5.0 4 1 1 5 5 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF60103 - 0.00088 19.4 4.1 0.00088 19.4 4.1 4.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF60103 - 0.0014 18.9 2.1 0.0014 18.9 2.1 3.9 5 0 0 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF60103 - 0.0021 18.3 2.1 0.044 14.0 0.2 2.7 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF60103 - 0.0085 16.8 28.9 0.027 15.3 4.9 6.0 4 1 2 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF60103 - 0.09 13.0 0.2 7.8 7.0 0.0 3.8 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF60103 - 0.33 11.1 3.8 17 5.7 0.1 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF60103 - 0.47 11.2 0.0 0.47 11.2 0.0 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat DUF4131 PF13567.6 ORF4454 - 0.046 13.4 0.0 0.046 13.4 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4131) DUF3742 PF12553.8 ORF4454 - 0.074 13.2 0.5 7 6.8 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3742) Prominin PF05478.11 ORF4454 - 8 4.3 18.6 0.8 7.6 0.1 2.2 2 0 0 2 2 2 0 Prominin Cation_ATPase_C PF00689.21 ORF88600 - 1.3e-44 152.1 2.4 1.3e-44 152.1 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF88600 - 4e-13 50.1 3.9 6.1e-11 43.0 3.9 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF88600 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF88600 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF88600 - 3.1e-05 23.8 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF88600 - 0.0088 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF88600 - 0.091 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Nup35_RRM PF05172.13 ORF28241 - 0.1 12.5 5.0 44 4.1 0.2 6.2 4 2 2 6 6 6 0 Nup53/35/40-type RNA recognition motif RNase_P_Rpp14 PF01900.19 ORF28241 - 0.16 12.3 1.1 2.6e+02 1.9 0.0 5.9 7 1 0 7 7 7 0 Rpp14/Pop5 family DUF2499 PF10693.9 ORF28241 - 0.16 12.3 0.2 16 5.8 0.0 4.1 4 1 0 4 4 4 0 Protein of unknown function (DUF2499) Cation_ATPase_C PF00689.21 ORF90027 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF90027 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF90027 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF90027 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF90027 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF90027 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF90027 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF89524 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF89524 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF89524 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF89524 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF89524 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF89524 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF89524 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF56911 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF56911 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF56911 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF56911 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF56911 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF56911 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF56911 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF56379 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF56379 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF56379 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF56379 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF56379 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF56379 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF56379 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF56240 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF56240 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF56240 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF56240 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF56240 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF56240 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF56240 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF13183 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF13183 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF13183 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF13183 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF13183 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF13183 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF13183 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF110661 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF110661 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF110661 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF110661 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF110661 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF110661 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF110661 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF108302 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF108302 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF108302 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF108302 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF108302 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF108302 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF108302 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Peptidase_C2 PF00648.21 ORF98109 - 4.6e-84 282.0 0.0 6.5e-84 281.5 0.0 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF98109 - 0.071 13.4 0.0 0.2 11.9 0.0 1.8 1 0 0 1 1 1 0 Calpain large subunit, domain III EF-hand_6 PF13405.6 ORF98109 - 0.098 12.6 0.8 3.1 8.0 0.0 3.4 3 0 0 3 3 3 0 EF-hand domain Peptidase_C2 PF00648.21 ORF95638 - 4.6e-84 282.0 0.0 6.5e-84 281.5 0.0 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF95638 - 0.074 13.3 0.0 0.2 11.9 0.0 1.7 1 0 0 1 1 1 0 Calpain large subunit, domain III EF-hand_6 PF13405.6 ORF95638 - 0.11 12.5 0.8 3.1 8.0 0.0 3.3 3 0 0 3 3 3 0 EF-hand domain V_ATPase_I PF01496.19 ORF18599 - 6.7e-232 771.8 0.2 8.2e-232 771.6 0.2 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family RPN7 PF10602.9 ORF18599 - 0.067 12.9 0.0 0.25 11.0 0.0 1.9 2 0 0 2 2 2 0 26S proteasome subunit RPN7 VPS13_C PF16909.5 ORF59291 - 2.8e-43 147.8 10.8 3.1e-40 137.9 2.3 3.2 3 0 0 3 3 3 2 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 ORF59291 - 0.00054 20.3 0.0 0.0028 18.0 0.0 2.1 2 0 0 2 2 2 1 Autophagy-related protein C terminal domain JUPITER PF17054.5 ORF59291 - 0.011 15.3 0.0 0.027 14.0 0.0 1.6 1 0 0 1 1 1 0 Microtubule-Associated protein Jupiter bPH_3 PF14470.6 ORF59291 - 0.53 10.7 5.8 0.15 12.4 0.4 2.8 3 0 0 3 3 3 0 Bacterial PH domain VPS13_C PF16909.5 ORF36591 - 2.8e-43 147.8 10.8 3.1e-40 137.9 2.3 3.2 3 0 0 3 3 3 2 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 ORF36591 - 0.00054 20.3 0.0 0.0028 18.0 0.0 2.1 2 0 0 2 2 2 1 Autophagy-related protein C terminal domain JUPITER PF17054.5 ORF36591 - 0.011 15.3 0.0 0.027 14.0 0.0 1.6 1 0 0 1 1 1 0 Microtubule-Associated protein Jupiter bPH_3 PF14470.6 ORF36591 - 0.53 10.7 5.8 0.15 12.4 0.4 2.8 3 0 0 3 3 3 0 Bacterial PH domain LptD PF04453.14 ORF96445 - 9.7e-113 377.3 31.6 2.2e-112 376.1 31.6 1.6 1 0 0 1 1 1 1 LPS transport system D OstA PF03968.14 ORF96445 - 1e-28 99.8 0.0 2.3e-28 98.7 0.0 1.6 1 0 0 1 1 1 1 OstA-like protein YfaZ PF07437.11 ORF96445 - 0.044 13.4 1.1 0.11 12.1 1.1 1.7 1 0 0 1 1 1 0 YfaZ precursor Peptidase_M16_M PF16187.5 ORF38294 - 8.2e-44 150.0 0.0 1.6e-43 149.0 0.0 1.5 2 0 0 2 2 2 1 Middle or third domain of peptidase_M16 Peptidase_M16_C PF05193.21 ORF38294 - 2.4e-13 50.5 0.0 7.8e-11 42.3 0.0 2.8 2 0 0 2 2 2 2 Peptidase M16 inactive domain AAA_30 PF13604.6 ORF111744 - 2.3e-12 47.0 0.0 5.3e-12 45.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF111744 - 2.9e-10 40.3 0.1 0.00077 19.3 0.1 2.5 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase HNH PF01844.23 ORF111744 - 2e-08 34.2 0.4 4.7e-08 33.1 0.4 1.6 1 0 0 1 1 1 1 HNH endonuclease AAA_16 PF13191.6 ORF111744 - 4.6e-05 23.9 0.5 0.00045 20.7 0.5 2.4 1 1 0 1 1 1 1 AAA ATPase domain KTI12 PF08433.10 ORF111744 - 7.5e-05 22.3 0.0 0.00013 21.6 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 MobB PF03205.14 ORF111744 - 0.00017 21.5 0.0 0.00031 20.7 0.0 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 ORF111744 - 0.00049 20.5 0.0 0.00093 19.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PIF1 PF05970.14 ORF111744 - 0.00051 19.3 0.0 0.0015 17.8 0.0 1.7 2 0 0 2 2 2 1 PIF1-like helicase AAA_19 PF13245.6 ORF111744 - 0.00078 19.8 0.2 0.0044 17.3 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF111744 - 0.0032 17.5 0.0 0.0066 16.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 ORF111744 - 0.0034 17.3 0.1 0.0058 16.6 0.1 1.4 1 0 0 1 1 1 1 NTPase Torsin PF06309.11 ORF111744 - 0.004 17.2 0.0 0.012 15.7 0.0 1.7 1 0 0 1 1 1 1 Torsin HNH_5 PF14279.6 ORF111744 - 0.0056 16.5 0.2 0.013 15.4 0.2 1.6 1 0 0 1 1 1 1 HNH endonuclease DUF2075 PF09848.9 ORF111744 - 0.006 15.9 0.0 0.0095 15.2 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 ORF111744 - 0.011 15.7 0.0 0.025 14.5 0.0 1.6 1 0 0 1 1 1 0 NACHT domain MeaB PF03308.16 ORF111744 - 0.013 14.5 0.0 0.021 13.8 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB IstB_IS21 PF01695.17 ORF111744 - 0.013 15.3 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein ATPase PF06745.13 ORF111744 - 0.016 14.6 0.0 0.03 13.7 0.0 1.4 1 0 0 1 1 1 0 KaiC Mg_chelatase PF01078.21 ORF111744 - 0.021 14.2 0.0 0.038 13.4 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Herpes_Helicase PF02689.14 ORF111744 - 0.021 12.8 0.0 0.035 12.1 0.0 1.2 1 0 0 1 1 1 0 Helicase AAA_22 PF13401.6 ORF111744 - 0.024 14.9 0.1 0.073 13.3 0.1 1.8 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF111744 - 0.036 14.6 0.0 0.11 13.1 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF111744 - 0.037 13.5 0.1 0.069 12.7 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region cobW PF02492.19 ORF111744 - 0.046 13.3 0.0 0.081 12.5 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 ORF111744 - 0.06 13.5 0.0 0.14 12.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF3079 PF11278.8 ORF111744 - 0.069 13.0 0.4 0.27 11.1 0.0 2.2 2 0 0 2 2 1 0 Protein of unknown function (DUF3079) TsaE PF02367.17 ORF111744 - 0.073 13.1 0.0 0.31 11.0 0.0 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 ORF111744 - 0.098 12.4 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 ORF111744 - 0.1 11.5 0.0 0.16 10.8 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain LytR_C PF13399.6 ORF111744 - 0.12 13.4 0.0 0.59 11.2 0.0 2.0 2 0 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator AAA_29 PF13555.6 ORF111744 - 0.15 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RNA_helicase PF00910.22 ORF111744 - 0.17 12.3 0.0 0.35 11.3 0.0 1.6 1 0 0 1 1 1 0 RNA helicase LpxK PF02606.14 ORF111744 - 0.19 10.8 0.0 0.34 10.0 0.0 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase Ank_2 PF12796.7 ORF29186 - 3.7e-23 81.9 0.1 1.6e-11 44.6 0.0 3.7 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF29186 - 4.9e-21 74.8 0.4 8.1e-11 42.2 0.0 4.6 3 1 2 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF29186 - 1.4e-19 69.5 1.1 9.8e-07 29.0 0.1 5.1 5 0 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF29186 - 4.1e-18 63.6 0.2 1.2e-05 25.3 0.0 5.4 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 ORF29186 - 2.7e-14 53.0 1.6 4.7e-07 30.0 0.0 5.0 3 1 2 5 5 5 2 Ankyrin repeats (many copies) Chordopox_A30L PF06015.12 ORF29186 - 0.16 11.9 0.1 0.35 10.7 0.1 1.5 1 0 0 1 1 1 0 Chordopoxvirus A30L protein STT3 PF02516.14 ORF47768 - 3.4e-41 141.7 13.2 6.2e-35 121.1 11.5 2.1 2 0 0 2 2 2 2 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.6 ORF47768 - 1.8 8.7 12.2 0.6 10.3 7.8 2.4 2 0 0 2 2 2 0 Dolichyl-phosphate-mannose-protein mannosyltransferase STT3 PF02516.14 ORF31218 - 3.4e-41 141.7 13.2 6.2e-35 121.1 11.5 2.1 2 0 0 2 2 2 2 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.6 ORF31218 - 1.8 8.7 12.2 0.6 10.3 7.8 2.4 2 0 0 2 2 2 0 Dolichyl-phosphate-mannose-protein mannosyltransferase PKD_channel PF08016.12 ORF112360 - 1.7e-17 63.3 22.4 2.9e-16 59.2 21.4 3.0 2 1 0 2 2 2 1 Polycystin cation channel Ion_trans PF00520.31 ORF112360 - 4.2e-08 32.7 16.8 8.5e-08 31.7 16.8 1.5 1 0 0 1 1 1 1 Ion transport protein Fib_alpha PF08702.10 ORF112360 - 0.00081 19.6 3.3 0.03 14.5 0.2 2.3 2 0 0 2 2 2 2 Fibrinogen alpha/beta chain family FAM184 PF15665.5 ORF112360 - 0.13 12.1 4.1 0.11 12.3 0.3 2.1 2 0 0 2 2 2 0 Family with sequence similarity 184, A and B DUF948 PF06103.11 ORF112360 - 0.14 12.4 5.1 2.4 8.5 0.2 3.7 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF16 PF01519.16 ORF112360 - 0.17 12.4 0.7 0.54 10.8 0.5 1.8 2 0 0 2 2 2 0 Protein of unknown function DUF16 Phage_GPO PF05929.11 ORF112360 - 0.42 10.2 2.5 0.51 9.9 0.5 1.8 2 0 0 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase Atg14 PF10186.9 ORF112360 - 2.3 7.2 5.0 1.2 8.2 0.3 2.0 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 BcsB PF03170.13 ORF110566 - 5.5e-220 731.8 1.2 6.4e-220 731.6 1.2 1.0 1 0 0 1 1 1 1 Bacterial cellulose synthase subunit Ank_2 PF12796.7 ORF50976 - 3.3e-13 50.0 0.1 2.1e-06 28.2 0.0 3.8 2 2 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF50976 - 2.4e-11 43.6 0.0 1.9e-08 34.4 0.0 3.6 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF50976 - 1.3e-10 41.2 0.7 0.0002 21.7 0.0 4.6 5 1 0 5 5 5 2 Ankyrin repeat Ank_3 PF13606.6 ORF50976 - 2e-08 33.8 0.0 0.03 14.9 0.0 5.0 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF50976 - 3.8e-08 33.7 0.0 2.7e-06 27.8 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeats (many copies) DUF2463 PF09591.10 ORF50976 - 0.056 13.3 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2463) Ion_trans PF00520.31 ORF50976 - 4.9 6.3 13.2 6.9 5.8 8.7 2.7 2 1 0 2 2 2 0 Ion transport protein UCH PF00443.29 ORF57414 - 9.4e-60 202.3 0.0 1.8e-58 198.0 0.0 2.1 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF57414 - 1.5e-11 44.5 4.9 4e-05 23.4 0.6 3.4 2 2 0 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase HSP90 PF00183.18 ORF52463 - 1.2e-181 605.1 29.9 1.7e-181 604.6 29.9 1.3 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF52463 - 2e-14 54.0 0.2 4.2e-14 53.0 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF52463 - 4.1e-13 49.3 0.2 1.1e-12 48.0 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CobT PF06213.12 ORF52463 - 0.0045 16.4 10.3 0.0045 16.4 10.3 3.2 3 0 0 3 3 3 2 Cobalamin biosynthesis protein CobT DUF913 PF06025.12 ORF52463 - 3.3 6.6 8.6 3.1 6.7 1.0 2.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) HSP90 PF00183.18 ORF46056 - 1.2e-181 605.1 29.9 1.7e-181 604.6 29.9 1.3 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF46056 - 2e-14 54.0 0.2 4.2e-14 53.0 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF46056 - 4.1e-13 49.3 0.2 1.1e-12 48.0 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CobT PF06213.12 ORF46056 - 0.0045 16.4 10.3 0.0045 16.4 10.3 3.2 3 0 0 3 3 3 2 Cobalamin biosynthesis protein CobT DUF913 PF06025.12 ORF46056 - 3.3 6.6 8.6 3.1 6.7 1.0 2.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) HSP90 PF00183.18 ORF101476 - 1.2e-181 605.1 29.9 1.7e-181 604.6 29.9 1.3 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF101476 - 2e-14 54.0 0.2 4.2e-14 53.0 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF101476 - 4.1e-13 49.3 0.2 1.1e-12 48.0 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CobT PF06213.12 ORF101476 - 0.0045 16.4 10.3 0.0045 16.4 10.3 3.2 3 0 0 3 3 3 2 Cobalamin biosynthesis protein CobT DUF913 PF06025.12 ORF101476 - 3.3 6.6 8.6 3.1 6.7 1.0 2.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) HSP90 PF00183.18 ORF100040 - 1.2e-181 605.1 29.9 1.7e-181 604.6 29.9 1.3 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF100040 - 2e-14 54.0 0.2 4.2e-14 53.0 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF100040 - 4.1e-13 49.3 0.2 1.1e-12 48.0 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CobT PF06213.12 ORF100040 - 0.0045 16.4 10.3 0.0045 16.4 10.3 3.2 3 0 0 3 3 3 2 Cobalamin biosynthesis protein CobT DUF913 PF06025.12 ORF100040 - 3.3 6.6 8.6 3.1 6.7 1.0 2.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) CD36 PF01130.21 ORF60517 - 3e-36 125.0 0.1 3e-36 125.0 0.1 1.5 2 0 0 2 2 2 1 CD36 family DUF3185 PF11381.8 ORF60517 - 0.079 13.0 0.9 0.21 11.6 0.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) CD36 PF01130.21 ORF54556 - 3e-36 125.0 0.1 3e-36 125.0 0.1 1.5 2 0 0 2 2 2 1 CD36 family DUF3185 PF11381.8 ORF54556 - 0.079 13.0 0.9 0.21 11.6 0.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) DUF4116 PF13475.6 ORF87921 - 3.3e-25 87.5 0.0 3.5e-08 33.0 0.1 5.4 2 2 2 5 5 5 5 Domain of unknown function (DUF4116) KR PF08659.10 ORF87921 - 0.00041 20.3 0.0 0.0013 18.7 0.0 1.9 2 0 0 2 2 2 1 KR domain Skp1 PF01466.19 ORF87921 - 0.0027 17.8 0.0 0.008 16.3 0.0 1.8 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Tex_N PF09371.10 ORF74890 - 1e-71 240.4 0.3 1.7e-71 239.6 0.3 1.4 1 0 0 1 1 1 1 Tex-like protein N-terminal domain Tex_YqgF PF16921.5 ORF74890 - 1.1e-50 171.3 0.3 1.9e-50 170.5 0.3 1.4 1 0 0 1 1 1 1 Tex protein YqgF-like domain HHH_3 PF12836.7 ORF74890 - 8.7e-29 99.6 0.0 2e-28 98.4 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif S1 PF00575.23 ORF74890 - 2.5e-24 85.4 0.6 4.6e-24 84.5 0.6 1.5 1 0 0 1 1 1 1 S1 RNA binding domain HHH_9 PF17674.1 ORF74890 - 5.7e-24 84.8 0.0 1.9e-23 83.2 0.0 2.0 1 0 0 1 1 1 1 HHH domain HHH_7 PF14635.6 ORF74890 - 5.1e-10 39.6 0.0 1.3e-09 38.3 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif YqgF PF14639.6 ORF74890 - 1.2e-07 31.6 0.0 2.9e-07 30.4 0.0 1.6 1 0 0 1 1 1 1 Holliday-junction resolvase-like of SPT6 HHH_6 PF14579.6 ORF74890 - 0.019 15.2 0.1 0.11 12.8 0.0 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix motif cNMP_binding PF00027.29 ORF109510 - 9.8e-31 105.7 0.0 2.9e-16 59.3 0.0 3.2 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain Ion_trans PF00520.31 ORF109510 - 3.7e-16 59.1 14.7 6.2e-16 58.4 14.7 1.4 1 0 0 1 1 1 1 Ion transport protein Peptidase_C2 PF00648.21 ORF67517 - 7.7e-65 218.8 0.0 1.3e-64 218.1 0.0 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease zf-CCHC PF00098.23 ORF67517 - 8.5e-09 35.1 0.8 2e-08 33.9 0.8 1.7 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_5 PF14787.6 ORF67517 - 0.067 12.9 0.4 0.17 11.6 0.4 1.6 1 0 0 1 1 1 0 GAG-polyprotein viral zinc-finger Baculo_PEP_C PF04513.12 ORF3268 - 6.9e-09 35.9 50.7 0.00077 19.5 2.3 7.0 4 3 3 7 7 7 3 Baculovirus polyhedron envelope protein, PEP, C terminus Fib_alpha PF08702.10 ORF3268 - 3.2e-07 30.6 63.2 0.00023 21.4 7.3 7.0 5 1 1 6 6 6 4 Fibrinogen alpha/beta chain family DUF4795 PF16043.5 ORF3268 - 4.3e-06 26.5 93.5 0.0005 19.7 10.7 6.7 2 2 0 3 3 3 1 Domain of unknown function (DUF4795) XhlA PF10779.9 ORF3268 - 7.9e-05 22.8 6.3 7.9e-05 22.8 6.3 11.6 8 5 5 13 13 10 3 Haemolysin XhlA APG17 PF04108.12 ORF3268 - 9.3e-05 21.7 9.2 9.3e-05 21.7 9.2 5.4 2 2 1 4 4 4 1 Autophagy protein Apg17 CorA PF01544.18 ORF3268 - 0.00027 20.4 7.2 0.00027 20.4 7.2 5.9 2 1 5 7 7 7 2 CorA-like Mg2+ transporter protein DUF1664 PF07889.12 ORF3268 - 0.00043 20.3 58.1 0.12 12.4 1.3 7.9 6 2 1 7 7 7 2 Protein of unknown function (DUF1664) TMPIT PF07851.13 ORF3268 - 0.00058 19.2 46.1 0.032 13.5 3.0 6.2 4 1 2 6 6 6 3 TMPIT-like protein DUF4618 PF15397.6 ORF3268 - 0.00062 19.3 0.9 0.00062 19.3 0.9 7.7 6 2 2 8 8 8 2 Domain of unknown function (DUF4618) AAA_13 PF13166.6 ORF3268 - 0.0014 17.4 62.9 0.0017 17.1 13.4 4.5 3 1 1 4 4 4 1 AAA domain APG6_N PF17675.1 ORF3268 - 0.0018 18.8 3.7 0.0018 18.8 3.7 6.8 4 2 2 6 6 5 1 Apg6 coiled-coil region DUF2935 PF11155.8 ORF3268 - 0.0037 17.6 7.2 52 4.2 4.1 5.5 3 2 0 3 3 3 0 Domain of unknown function (DUF2935) Tropomyosin_1 PF12718.7 ORF3268 - 0.006 16.7 86.1 0.0076 16.4 15.2 6.1 3 2 1 5 5 5 2 Tropomyosin like SHE3 PF17078.5 ORF3268 - 0.0069 16.1 9.3 0.0069 16.1 9.3 5.8 2 1 2 4 4 4 1 SWI5-dependent HO expression protein 3 GrpE PF01025.19 ORF3268 - 0.0094 15.6 76.9 0.052 13.2 5.9 7.5 4 2 2 6 6 6 2 GrpE Fez1 PF06818.15 ORF3268 - 0.015 15.7 12.7 0.015 15.7 12.7 5.5 1 1 2 4 4 3 0 Fez1 Occludin_ELL PF07303.13 ORF3268 - 0.02 15.6 5.7 0.02 15.6 5.7 7.8 6 2 1 7 7 6 0 Occludin homology domain HD_4 PF13328.6 ORF3268 - 0.037 13.8 0.9 4.1 7.1 0.2 3.0 3 0 0 3 3 2 0 HD domain Spc7 PF08317.11 ORF3268 - 0.043 12.7 88.1 0.11 11.4 6.8 6.2 1 1 5 6 6 6 0 Spc7 kinetochore protein MscS_porin PF12795.7 ORF3268 - 0.056 13.0 64.3 0.017 14.7 5.8 6.5 4 2 2 6 6 6 0 Mechanosensitive ion channel porin domain PspA_IM30 PF04012.12 ORF3268 - 0.068 12.7 44.0 0.02 14.5 3.0 6.3 4 2 1 5 5 5 0 PspA/IM30 family DUF948 PF06103.11 ORF3268 - 0.078 13.2 0.2 0.078 13.2 0.2 8.2 5 3 1 6 6 6 0 Bacterial protein of unknown function (DUF948) Laminin_II PF06009.12 ORF3268 - 0.12 12.3 70.1 0.017 15.2 4.3 6.9 5 2 2 7 7 6 0 Laminin Domain II Exonuc_VII_L PF02601.15 ORF3268 - 0.17 11.4 51.6 1.8e+04 -28.9 51.5 5.4 1 1 0 1 1 0 0 Exonuclease VII, large subunit SlyX PF04102.12 ORF3268 - 0.22 12.2 0.1 0.22 12.2 0.1 9.6 8 3 1 9 9 8 0 SlyX Nup54 PF13874.6 ORF3268 - 0.23 11.6 42.3 5.1 7.2 2.8 7.8 4 3 1 6 6 6 0 Nucleoporin complex subunit 54 DUF4541 PF15074.6 ORF3268 - 0.28 11.8 4.0 0.56 10.8 1.2 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4541) Filament PF00038.21 ORF3268 - 0.31 10.6 69.6 0.0087 15.7 17.8 4.9 1 1 1 3 3 2 0 Intermediate filament protein DUF3584 PF12128.8 ORF3268 - 0.36 8.3 70.1 1.6 6.1 32.8 4.1 1 1 1 3 3 3 0 Protein of unknown function (DUF3584) Golgin_A5 PF09787.9 ORF3268 - 0.44 10.0 69.0 0.099 12.1 1.0 5.9 3 1 2 6 6 6 0 Golgin subfamily A member 5 WXG100 PF06013.12 ORF3268 - 0.6 10.4 19.4 13 6.1 0.1 7.3 7 1 0 7 7 7 0 Proteins of 100 residues with WXG ATG16 PF08614.11 ORF3268 - 0.92 9.7 79.0 0.83 9.9 3.0 6.5 3 2 3 6 6 6 0 Autophagy protein 16 (ATG16) ApoO PF09769.9 ORF3268 - 1.1 9.3 13.7 2.6 8.0 0.0 6.2 5 3 2 7 7 6 0 Apolipoprotein O Tropomyosin PF00261.20 ORF3268 - 1.2 8.4 80.9 0.15 11.4 3.3 6.7 4 2 0 5 5 5 0 Tropomyosin Heme_oxygenase PF01126.20 ORF3268 - 1.6 8.5 6.5 0.43 10.3 1.6 2.5 2 0 0 2 2 2 0 Heme oxygenase DUF1978 PF09321.10 ORF3268 - 1.7 7.9 62.4 0.012 14.9 12.6 6.0 5 1 1 6 6 6 0 Domain of unknown function (DUF1978) MCPsignal PF00015.21 ORF3268 - 2.7 7.8 14.4 2.8 7.7 0.2 5.1 5 0 0 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF16 PF01519.16 ORF3268 - 2.9 8.4 70.3 0.35 11.4 0.5 7.9 4 2 3 7 7 7 0 Protein of unknown function DUF16 DUF4407 PF14362.6 ORF3268 - 3.5 6.9 50.3 1.1e+02 2.0 11.6 4.8 1 1 2 3 3 2 0 Domain of unknown function (DUF4407) SesA PF17107.5 ORF3268 - 4.4 7.5 34.6 0.11 12.7 2.7 6.2 4 3 2 7 7 7 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Spectrin PF00435.21 ORF3268 - 4.4 7.8 64.2 0.28 11.7 2.7 7.3 3 2 1 6 6 6 0 Spectrin repeat Myosin_tail_1 PF01576.19 ORF3268 - 4.5 4.9 77.7 0.0095 13.8 16.0 4.0 2 1 0 4 4 4 0 Myosin tail COG2 PF06148.11 ORF3268 - 5.7 7.0 46.4 1.4 9.0 0.9 7.7 5 4 2 7 7 7 0 COG (conserved oligomeric Golgi) complex component, COG2 Lebercilin PF15619.6 ORF3268 - 6.1 6.5 85.5 0.34 10.5 20.1 7.2 5 3 0 5 5 5 0 Ciliary protein causing Leber congenital amaurosis disease FapA PF03961.13 ORF3268 - 7.9 5.0 77.7 0.39 9.3 4.8 6.4 1 1 5 6 6 5 0 Flagellar Assembly Protein A HrpE PF06188.12 ORF60829 - 0.24 11.3 0.1 0.24 11.3 0.1 2.6 3 0 0 3 3 3 0 HrpE/YscL/FliH and V-type ATPase subunit E CD36 PF01130.21 ORF42524 - 3e-36 125.0 0.1 3e-36 125.0 0.1 1.5 2 0 0 2 2 2 1 CD36 family DUF3185 PF11381.8 ORF42524 - 0.078 13.0 0.9 0.21 11.6 0.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) Anoctamin PF04547.12 ORF82086 - 2.8e-93 313.2 20.1 3.6e-93 312.9 20.1 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel Anoct_dimer PF16178.5 ORF82086 - 3.4e-07 30.2 0.0 6.3e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 Dimerisation domain of Ca+-activated chloride-channel, anoctamin DUF1772 PF08592.11 ORF82086 - 0.24 11.7 7.4 0.13 12.6 0.2 2.9 2 1 0 3 3 3 0 Domain of unknown function (DUF1772) WASH_WAHD PF11945.8 ORF45987 - 1.9e-11 44.0 15.4 1.9e-11 44.0 15.4 2.8 2 1 0 3 3 3 1 WAHD domain of WASH complex LHH PF14411.6 ORF29522 - 1.2e-06 28.6 6.9 1.2e-06 28.6 6.9 2.3 2 1 0 2 2 2 1 A nuclease of the HNH/ENDO VII superfamily with conserved LHH Ribonuclease_3 PF00636.26 NODE_1764_length_2299_cov_443.643551_g1166_i0reverse_frame_3 - 1.8e-16 60.6 0.0 5.1e-11 43.1 0.1 4.8 3 2 0 3 3 3 2 Ribonuclease III domain Ribonucleas_3_3 PF14622.6 NODE_1764_length_2299_cov_443.643551_g1166_i0reverse_frame_3 - 2.4e-14 53.6 1.1 0.0009 19.4 0.1 4.7 4 0 0 4 4 4 4 Ribonuclease-III-like Acyltransferase PF01553.21 ORF1313 - 1.8e-26 92.4 0.0 3.1e-26 91.6 0.0 1.4 1 0 0 1 1 1 1 Acyltransferase SelB-wing_2 PF09106.11 ORF1313 - 0.1 12.8 0.6 1.5 9.0 0.1 3.0 3 0 0 3 3 3 0 Elongation factor SelB, winged helix PFL-like PF02901.15 ORF60628 - 2.9e-203 677.1 0.0 3.6e-203 676.8 0.0 1.1 1 0 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 ORF60628 - 1e-27 96.8 0.0 2.8e-27 95.3 0.0 1.8 1 0 0 1 1 1 1 Glycine radical Ribosomal_S15 PF00312.22 ORF60628 - 0.035 14.3 0.8 1.4 9.2 0.0 2.7 2 0 0 2 2 2 0 Ribosomal protein S15 TPR_20 PF14561.6 ORF60628 - 0.37 11.2 3.3 2.9 8.3 0.1 2.9 2 1 0 2 2 2 0 Tetratricopeptide repeat Ald_Xan_dh_C2 PF02738.18 ORF32698 - 1.4e-162 542.0 0.1 1.7e-162 541.7 0.1 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 ORF32698 - 4.2e-36 123.7 0.1 9.4e-36 122.5 0.1 1.6 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DUF4694 PF15765.5 ORF32698 - 0.12 12.3 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) PFL-like PF02901.15 ORF25219 - 2.1e-195 651.2 0.0 2.9e-195 650.7 0.0 1.1 1 0 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 ORF25219 - 3.1e-42 143.4 0.0 6.4e-42 142.4 0.0 1.6 1 0 0 1 1 1 1 Glycine radical NRDD PF13597.6 ORF25219 - 0.22 10.3 0.1 0.55 9.0 0.1 1.6 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase RVT_2 PF07727.14 ORF81826 - 1.7e-17 63.9 0.0 5.5e-16 58.9 0.0 2.1 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) Elicitin PF00964.17 ORF81826 - 0.36 10.9 2.7 2 8.6 0.3 2.5 2 0 0 2 2 2 0 Elicitin RVT_2 PF07727.14 ORF7073 - 1.7e-17 63.9 0.0 5.5e-16 58.9 0.0 2.1 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) Elicitin PF00964.17 ORF7073 - 0.36 10.9 2.7 2 8.6 0.3 2.5 2 0 0 2 2 2 0 Elicitin RVT_2 PF07727.14 ORF65001 - 1.7e-17 63.9 0.0 5.5e-16 58.9 0.0 2.1 2 0 0 2 2 2 2 Reverse transcriptase (RNA-dependent DNA polymerase) EF-hand_7 PF13499.6 ORF73500 - 2.3e-18 66.4 21.8 6.5e-06 26.5 1.2 5.7 5 1 0 5 5 5 4 EF-hand domain pair EF-hand_1 PF00036.32 ORF73500 - 1e-15 56.0 17.0 0.0029 17.0 0.6 7.7 7 1 0 7 7 7 5 EF hand EF-hand_6 PF13405.6 ORF73500 - 7e-15 53.6 20.7 0.013 15.3 1.1 9.3 7 2 2 9 9 9 5 EF-hand domain EF-hand_5 PF13202.6 ORF73500 - 5.6e-09 35.1 12.7 0.067 12.7 0.0 6.3 7 0 0 7 7 7 3 EF hand EF-hand_8 PF13833.6 ORF73500 - 1.3e-08 34.5 12.1 0.29 11.0 0.8 5.7 5 0 0 5 5 5 4 EF-hand domain pair EF-hand_11 PF08976.11 ORF73500 - 0.2 12.6 1.3 1.3 9.9 0.0 2.9 3 0 0 3 3 3 0 EF-hand domain Molybdop_Fe4S4 PF04879.16 ORF36222 - 3.8e-11 42.8 0.1 7e-11 41.9 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Molybdopterin PF00384.22 ORF36222 - 2.6e-10 39.9 0.0 7.3e-08 31.8 0.0 2.2 2 0 0 2 2 2 2 Molybdopterin oxidoreductase Molydop_binding PF01568.21 ORF36222 - 3.5e-07 30.2 0.0 8.6e-07 29.0 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain TPP_enzyme_M PF00205.22 ORF36222 - 0.083 12.6 4.4 0.54 10.0 2.0 2.7 3 1 0 3 3 3 0 Thiamine pyrophosphate enzyme, central domain Fer4 PF00037.27 ORF36222 - 0.5 10.3 3.6 3 7.8 1.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Peptidase_M1 PF01433.20 ORF25000 - 3.4e-58 196.8 5.3 1e-57 195.2 5.3 1.9 1 0 0 1 1 1 1 Peptidase family M1 domain ERAP1_C PF11838.8 ORF25000 - 3.2e-20 72.9 0.1 4.7e-20 72.4 0.1 1.3 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Aminopep PF10023.9 ORF25000 - 0.044 13.1 0.0 0.12 11.7 0.0 1.7 1 0 0 1 1 1 0 Putative aminopeptidase PTA_PTB PF01515.19 ORF32823 - 1.1e-102 343.6 0.1 1.5e-102 343.2 0.1 1.2 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase malic PF00390.19 ORF32823 - 8.6e-32 110.4 0.3 2.7e-29 102.3 0.2 2.6 2 1 0 2 2 2 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 ORF32823 - 2.7e-20 72.7 5.6 1.8e-19 70.0 2.0 2.8 2 1 0 2 2 2 1 Malic enzyme, NAD binding domain ELFV_dehydrog PF00208.21 ORF32823 - 0.0072 16.1 0.7 0.022 14.5 0.7 1.8 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CCDC117 PF15810.5 ORF32823 - 0.19 12.0 0.1 1.9 8.8 0.1 2.2 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 117 Guanylate_cyc PF00211.20 ORF105935 - 1.3e-14 54.2 0.0 3.9e-14 52.7 0.0 1.7 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain DUF575 PF04746.12 ORF105935 - 1.4 9.2 3.6 26 5.1 0.3 3.8 4 0 0 4 4 4 0 Protein of unknown function (DUF575) Adaptin_N PF01602.20 ORF99507 - 5.7e-95 318.9 19.1 7.3e-95 318.5 19.1 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Alpha_adaptinC2 PF02883.20 ORF99507 - 1.9e-22 79.6 3.1 4.1e-22 78.6 3.1 1.4 1 0 0 1 1 1 1 Adaptin C-terminal domain Cnd1 PF12717.7 ORF99507 - 1.4e-06 28.4 16.3 0.0017 18.4 4.5 3.2 2 1 1 3 3 3 2 non-SMC mitotic condensation complex subunit 1 PI_PP_C PF18365.1 ORF99507 - 0.00031 20.7 0.5 0.023 14.7 0.2 2.8 2 0 0 2 2 2 1 Phosphoinositide phosphatase C-terminal domain Dopey_N PF04118.14 ORF99507 - 0.0028 16.8 0.8 0.0078 15.4 0.8 1.7 1 0 0 1 1 1 1 Dopey, N-terminal DNA_alkylation PF08713.11 ORF99507 - 0.038 13.7 0.0 0.14 11.9 0.0 1.9 2 0 0 2 2 2 0 DNA alkylation repair enzyme Vac14_Fab1_bd PF12755.7 ORF99507 - 0.047 14.3 3.0 2.6 8.7 0.2 3.6 2 1 1 3 3 3 0 Vacuolar 14 Fab1-binding region IBD PF10416.9 ORF99507 - 0.063 13.3 0.5 0.17 11.9 0.5 1.8 1 0 0 1 1 1 0 Transcription-initiator DNA-binding domain IBD HEAT PF02985.22 ORF99507 - 0.069 13.5 0.0 3.4 8.2 0.0 3.4 3 0 0 3 3 3 0 HEAT repeat DNA_ligase_A_N PF04675.14 ORF99507 - 0.78 10.0 3.3 30 4.9 1.6 2.9 1 1 0 2 2 2 0 DNA ligase N terminus HMG-CoA_red PF00368.18 ORF71446 - 7.2e-93 311.5 1.2 9.5e-93 311.1 1.2 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase IQ PF00612.27 ORF56405 - 0.014 15.1 3.2 0.031 14.1 3.2 1.6 1 0 0 1 1 1 0 IQ calmodulin-binding motif PhetRS_B1 PF18262.1 ORF56405 - 0.39 11.0 6.2 0.17 12.1 1.2 3.1 2 0 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain ABC_tran PF00005.27 ORF112017 - 1.6e-36 125.9 0.1 8.2e-27 94.4 0.0 2.6 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 ORF112017 - 2.6e-21 76.5 16.2 3.8e-21 76.0 16.2 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF112017 - 6.3e-10 38.9 4.3 0.00026 20.5 0.4 3.5 3 0 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF112017 - 7.2e-07 29.3 2.1 0.21 11.3 0.1 4.1 2 2 2 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system DUF87 PF01935.17 ORF112017 - 0.0041 17.3 0.1 0.0041 17.3 0.1 2.3 2 0 0 2 2 2 1 Helicase HerA, central domain DUF2207 PF09972.9 ORF112017 - 0.06 12.1 9.6 0.65 8.7 9.6 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) MMR_HSR1 PF01926.23 ORF112017 - 0.081 13.0 0.0 0.24 11.5 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase PPDK_N PF01326.19 ORF98501 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF98501 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF98501 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF98501 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase PPDK_N PF01326.19 ORF89794 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF89794 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF89794 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF89794 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase PPDK_N PF01326.19 ORF83964 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF83964 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF83964 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF83964 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase PPDK_N PF01326.19 ORF74675 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF74675 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF74675 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF74675 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase ADK PF00406.22 ORF58107 - 2e-22 79.9 4.6 2.5e-10 40.7 0.1 5.3 5 0 0 5 5 5 4 Adenylate kinase AAA_17 PF13207.6 ORF58107 - 1.5e-15 57.9 5.2 5.8e-08 33.3 0.0 4.9 4 1 0 4 4 4 2 AAA domain AAA_18 PF13238.6 ORF58107 - 1.7e-09 38.3 0.2 3e-07 31.0 0.0 3.4 3 0 0 3 3 3 1 AAA domain AAA_33 PF13671.6 ORF58107 - 1e-05 25.7 0.0 0.00012 22.3 0.0 2.5 3 0 0 3 3 3 1 AAA domain AAA_28 PF13521.6 ORF58107 - 5.9e-05 23.4 0.0 0.00016 22.0 0.0 1.8 1 0 0 1 1 1 1 AAA domain T2SSE PF00437.20 ORF58107 - 0.0053 15.9 0.0 0.011 14.8 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein CoaE PF01121.20 ORF58107 - 0.016 14.9 0.0 0.074 12.7 0.0 2.2 2 0 0 2 2 2 0 Dephospho-CoA kinase dNK PF01712.19 ORF58107 - 0.046 13.6 1.9 0.6 9.9 0.0 3.0 3 0 0 3 3 3 0 Deoxynucleoside kinase CPT PF07931.12 ORF58107 - 0.062 13.1 0.0 0.31 10.9 0.0 2.1 2 1 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein PPDK_N PF01326.19 ORF5479 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF5479 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF5479 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF5479 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase Tmemb_9 PF05434.11 ORF52642 - 0.0015 18.4 0.7 0.0072 16.2 0.1 2.5 2 0 0 2 2 2 1 TMEM9 DUF2205 PF10224.9 ORF52642 - 0.031 14.3 0.3 0.031 14.3 0.3 2.8 2 1 1 3 3 3 0 Short coiled-coil protein AA_permease PF00324.21 ORF52642 - 0.039 12.5 0.5 0.066 11.8 0.5 1.3 1 0 0 1 1 1 0 Amino acid permease SSP160 PF06933.11 ORF52642 - 0.095 10.9 10.6 0.14 10.3 10.6 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DpnI_C PF17726.1 ORF52642 - 0.11 12.6 1.2 1.3 9.2 0.1 2.7 2 0 0 2 2 2 0 Dam-replacing HTH domain Claudin_2 PF13903.6 ORF52642 - 8.3 6.1 6.0 8.3 6.1 0.2 2.7 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction PPDK_N PF01326.19 ORF49349 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF49349 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF49349 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF49349 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase STT3 PF02516.14 ORF39204 - 1.2e-113 380.6 35.1 1.6e-111 373.7 35.1 2.1 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF4710 PF15828.5 ORF39204 - 8.8 6.5 8.0 24 5.2 8.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) PPDK_N PF01326.19 ORF109592 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF109592 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF109592 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF109592 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase STT3 PF02516.14 ORF101130 - 1.2e-113 380.6 35.1 1.6e-111 373.7 35.1 2.1 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF4710 PF15828.5 ORF101130 - 8.8 6.5 8.0 24 5.2 8.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) WD40 PF00400.32 ORF40184 - 1e-09 38.8 0.1 1 10.4 0.0 5.8 6 0 0 6 6 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF40184 - 1.4e-07 31.7 0.1 0.0067 16.7 0.0 4.9 2 1 3 5 5 5 1 Anaphase-promoting complex subunit 4 WD40 domain Ras PF00071.22 ORF40184 - 7.2e-07 29.0 1.9 1.1e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 Ras family Roc PF08477.13 ORF40184 - 0.00074 19.7 0.0 0.0025 18.0 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Tropomyosin_1 PF12718.7 ORF40184 - 0.0028 17.8 17.3 0.0028 17.8 17.3 2.6 1 1 1 2 2 2 1 Tropomyosin like MMR_HSR1 PF01926.23 ORF40184 - 0.0034 17.5 0.6 0.013 15.6 0.0 2.3 2 1 0 2 2 2 1 50S ribosome-binding GTPase HOOK PF05622.12 ORF40184 - 0.0053 15.0 27.1 0.0081 14.4 27.1 1.1 1 0 0 1 1 1 1 HOOK protein Dynamin_N PF00350.23 ORF40184 - 0.014 15.4 8.9 0.04 14.0 0.0 3.4 3 1 0 3 3 3 0 Dynamin family AAA_28 PF13521.6 ORF40184 - 0.039 14.2 1.2 0.13 12.5 0.0 2.5 2 1 1 3 3 3 0 AAA domain Zeta_toxin PF06414.12 ORF40184 - 0.039 13.2 0.1 0.039 13.2 0.1 2.3 2 0 0 2 2 2 0 Zeta toxin Sen15 PF09631.10 ORF40184 - 0.12 12.7 1.7 0.36 11.2 0.0 2.6 2 1 0 2 2 2 0 Sen15 protein AAA_29 PF13555.6 ORF40184 - 0.12 12.1 0.0 0.72 9.6 0.0 2.2 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF40184 - 0.25 11.0 9.4 4.5 6.9 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain Fez1 PF06818.15 ORF40184 - 0.52 10.7 30.4 3.3 8.1 7.3 2.2 1 1 1 2 2 2 0 Fez1 ATG16 PF08614.11 ORF40184 - 0.63 10.2 36.2 1.2 9.3 36.2 1.4 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) EzrA PF06160.12 ORF40184 - 0.71 8.0 24.5 1.9 6.6 24.2 1.6 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA ABC_tran PF00005.27 ORF40184 - 1.5 9.3 0.0 1.5 9.3 0.0 2.8 2 1 0 2 2 1 0 ABC transporter TPR_MLP1_2 PF07926.12 ORF40184 - 1.6 8.8 37.9 3.7 7.6 18.6 2.5 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein KASH_CCD PF14662.6 ORF40184 - 1.8 8.3 34.5 3.5 7.4 34.5 1.5 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DUF4200 PF13863.6 ORF40184 - 2.3 8.6 36.2 18 5.7 31.3 3.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF1664 PF07889.12 ORF40184 - 3.2 7.8 17.2 0.36 10.9 10.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) V_ATPase_I PF01496.19 ORF40184 - 4.3 5.1 14.8 6.4 4.6 14.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DMPK_coil PF08826.10 ORF40184 - 7.3 6.8 27.6 0.68 10.1 7.5 3.5 2 1 1 3 3 3 0 DMPK coiled coil domain like Tektin PF03148.14 ORF40184 - 8.3 5.1 27.8 3.3 6.4 9.7 2.2 1 1 1 2 2 2 0 Tektin family Cyt-b5 PF00173.28 ORF22361 - 9.3e-06 25.7 0.0 2.4e-05 24.4 0.0 1.8 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FAD_binding_6 PF00970.24 ORF22361 - 1.4e-05 25.3 0.2 6.7e-05 23.2 0.0 2.1 1 1 1 2 2 2 1 Oxidoreductase FAD-binding domain Cytochrom_B561 PF03188.16 ORF22361 - 4.9e-05 23.5 10.2 0.00012 22.2 10.2 1.6 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 CDH-cyt PF16010.5 ORF22361 - 0.0013 18.4 0.0 0.0034 17.1 0.0 1.7 1 0 0 1 1 1 1 Cytochrome domain of cellobiose dehydrogenase NAD_binding_1 PF00175.21 ORF22361 - 0.01 16.5 0.0 0.046 14.4 0.0 2.1 2 1 0 2 2 2 1 Oxidoreductase NAD-binding domain Paz_1 PF18349.1 ORF22361 - 0.054 13.5 0.1 0.1 12.5 0.1 1.5 1 0 0 1 1 1 0 PAZ domain SAPS PF04499.15 ORF110512 - 4.3e-15 55.5 16.7 5.8e-11 41.8 0.4 4.4 4 1 0 4 4 4 2 SIT4 phosphatase-associated protein Meth_synt_2 PF01717.18 ORF9742 - 6.3e-172 571.2 0.0 1.8e-163 543.4 0.0 2.4 2 0 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 ORF9742 - 7e-134 446.3 0.0 6.2e-125 416.9 0.0 2.2 2 0 0 2 2 2 2 Cobalamin-independent synthase, N-terminal domain EF-hand_7 PF13499.6 ORF88307 - 4e-07 30.4 0.4 0.00037 20.9 0.1 3.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF88307 - 1.1e-05 24.9 0.0 0.0013 18.5 0.0 2.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF88307 - 3.8e-05 22.9 0.6 0.002 17.5 0.4 2.8 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF88307 - 0.036 13.9 0.3 0.6 10.0 0.1 2.7 3 0 0 3 3 3 0 EF-hand domain pair His_kinase PF06580.13 ORF88307 - 0.052 13.9 0.7 0.22 11.9 0.2 2.4 2 0 0 2 2 2 0 Histidine kinase CwfJ_C_1 PF04677.15 ORF88307 - 0.077 12.9 0.5 0.28 11.1 0.1 2.1 2 0 0 2 2 2 0 Protein similar to CwfJ C-terminus 1 EF-hand_5 PF13202.6 ORF88307 - 7.2 6.3 10.7 0.15 11.6 0.4 3.1 3 0 0 3 3 3 0 EF hand EF-hand_7 PF13499.6 ORF4949 - 4e-07 30.4 0.4 0.00037 20.9 0.1 3.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF4949 - 1.1e-05 24.9 0.0 0.0013 18.5 0.0 2.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF4949 - 3.8e-05 22.9 0.6 0.002 17.5 0.4 2.8 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF4949 - 0.036 13.9 0.3 0.6 10.0 0.1 2.7 3 0 0 3 3 3 0 EF-hand domain pair His_kinase PF06580.13 ORF4949 - 0.052 13.9 0.7 0.22 11.9 0.2 2.4 2 0 0 2 2 2 0 Histidine kinase CwfJ_C_1 PF04677.15 ORF4949 - 0.077 12.9 0.5 0.28 11.1 0.1 2.1 2 0 0 2 2 2 0 Protein similar to CwfJ C-terminus 1 EF-hand_5 PF13202.6 ORF4949 - 7.2 6.3 10.7 0.15 11.6 0.4 3.1 3 0 0 3 3 3 0 EF hand RNA_pol_Rpb2_6 PF00562.28 ORF88976 - 8.7e-87 291.7 0.1 1.2e-85 287.9 0.1 2.5 2 1 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 ORF88976 - 2.7e-12 46.9 0.1 7.3e-12 45.5 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 ETM PF17577.2 ORF88976 - 0.2 12.3 0.5 3.1 8.4 0.1 2.3 2 0 0 2 2 2 0 ECORI-T site AAA_30 PF13604.6 ORF92847 - 1.5e-16 60.7 0.0 2.5e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF92847 - 9.2e-07 28.8 0.1 0.0012 18.6 0.0 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 ORF92847 - 1.4e-06 28.7 0.2 0.0001 22.7 0.2 2.3 1 1 0 1 1 1 1 AAA domain PIF1 PF05970.14 ORF92847 - 0.00016 21.0 0.0 0.0022 17.2 0.0 2.1 2 0 0 2 2 2 1 PIF1-like helicase AAA_22 PF13401.6 ORF92847 - 0.00021 21.6 0.1 0.00053 20.3 0.1 1.6 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 ORF92847 - 0.00027 20.5 0.0 0.00043 19.8 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 ORF92847 - 0.00034 21.1 0.1 0.0012 19.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF92847 - 0.00043 20.5 0.0 0.017 15.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF92847 - 0.0011 18.4 0.0 0.0018 17.7 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_11 PF13086.6 ORF92847 - 0.0013 18.6 0.1 0.62 9.8 0.0 2.2 1 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF92847 - 0.0021 18.1 0.0 0.0045 17.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF92847 - 0.003 17.3 0.1 0.0052 16.5 0.1 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein GvpD PF07088.11 ORF92847 - 0.0031 16.2 0.0 0.0046 15.6 0.0 1.2 1 0 0 1 1 1 1 GvpD gas vesicle protein AAA PF00004.29 ORF92847 - 0.0047 17.4 0.0 0.0077 16.7 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MobB PF03205.14 ORF92847 - 0.0051 16.7 0.1 0.009 15.9 0.1 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 ORF92847 - 0.0068 16.3 0.1 0.012 15.5 0.1 1.4 1 0 0 1 1 1 1 NTPase Zeta_toxin PF06414.12 ORF92847 - 0.007 15.7 0.0 0.012 14.9 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin MeaB PF03308.16 ORF92847 - 0.0082 15.1 0.0 0.013 14.5 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 ORF92847 - 0.027 14.4 0.0 0.062 13.2 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_18 PF13238.6 ORF92847 - 0.028 14.9 0.0 0.068 13.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF92847 - 0.055 13.5 0.0 0.35 10.9 0.0 2.0 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 ORF92847 - 0.076 12.6 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 ORF92847 - 0.084 12.1 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TrwB_AAD_bind PF10412.9 ORF92847 - 0.089 11.7 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain APS_kinase PF01583.20 ORF92847 - 0.2 11.6 0.0 0.42 10.5 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase ATPase PF06745.13 ORF92847 - 0.27 10.5 0.0 0.45 9.8 0.0 1.2 1 0 0 1 1 1 0 KaiC AAA_30 PF13604.6 ORF57912 - 1.5e-16 60.7 0.0 2.5e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF57912 - 9e-07 28.9 0.1 0.0012 18.6 0.0 2.3 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 ORF57912 - 1.4e-06 28.7 0.2 0.0001 22.7 0.2 2.3 1 1 0 1 1 1 1 AAA domain PIF1 PF05970.14 ORF57912 - 0.00016 21.0 0.0 0.0022 17.2 0.0 2.1 2 0 0 2 2 2 1 PIF1-like helicase AAA_22 PF13401.6 ORF57912 - 0.00021 21.6 0.1 0.00053 20.3 0.1 1.6 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 ORF57912 - 0.00027 20.5 0.0 0.00043 19.8 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 ORF57912 - 0.00034 21.1 0.1 0.0012 19.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF57912 - 0.00043 20.4 0.0 0.017 15.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF57912 - 0.0011 18.4 0.0 0.0018 17.7 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_11 PF13086.6 ORF57912 - 0.0013 18.6 0.1 0.62 9.8 0.0 2.2 1 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF57912 - 0.002 18.1 0.0 0.0045 17.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF57912 - 0.003 17.3 0.1 0.0052 16.5 0.1 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein GvpD PF07088.11 ORF57912 - 0.003 16.2 0.0 0.0046 15.6 0.0 1.2 1 0 0 1 1 1 1 GvpD gas vesicle protein AAA PF00004.29 ORF57912 - 0.004 17.6 0.0 0.0077 16.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MobB PF03205.14 ORF57912 - 0.005 16.7 0.1 0.009 15.9 0.1 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 ORF57912 - 0.0067 16.3 0.1 0.012 15.5 0.1 1.4 1 0 0 1 1 1 1 NTPase Zeta_toxin PF06414.12 ORF57912 - 0.0068 15.7 0.0 0.012 14.9 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin MeaB PF03308.16 ORF57912 - 0.0082 15.1 0.0 0.013 14.5 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 ORF57912 - 0.027 14.4 0.0 0.062 13.2 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_18 PF13238.6 ORF57912 - 0.028 14.9 0.0 0.068 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF57912 - 0.054 13.5 0.0 0.35 10.9 0.0 2.0 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 ORF57912 - 0.075 12.6 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 ORF57912 - 0.083 12.1 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TrwB_AAD_bind PF10412.9 ORF57912 - 0.089 11.7 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ATPase PF06745.13 ORF57912 - 0.27 10.5 0.0 0.45 9.8 0.0 1.2 1 0 0 1 1 1 0 KaiC Dynamin_M PF01031.20 ORF24489 - 4.3e-77 259.1 0.2 8.1e-77 258.2 0.2 1.4 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 ORF24489 - 1.4e-49 168.4 0.1 5.5e-49 166.4 0.0 2.1 2 0 0 2 2 2 1 Dynamin family GED PF02212.18 ORF24489 - 3.2e-20 72.1 2.1 4e-20 71.8 0.0 2.4 2 0 0 2 2 2 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 ORF24489 - 0.00037 20.5 0.0 0.0014 18.7 0.0 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF3194 PF11419.8 ORF24489 - 0.073 13.4 0.1 0.49 10.8 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3194) Asp-B-Hydro_N PF05279.11 ORF24489 - 7.4 6.6 9.6 0.39 10.7 2.8 2.0 2 0 0 2 2 2 0 Aspartyl beta-hydroxylase N-terminal region AAA_2 PF07724.14 ORF66742 - 2.8e-51 174.1 0.0 1.5e-47 161.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF66742 - 5e-30 103.5 2.7 7.9e-30 102.9 1.4 2.1 2 0 0 2 2 1 1 AAA lid domain AAA PF00004.29 ORF66742 - 3.6e-24 85.7 0.1 7.7e-13 49.0 0.0 3.2 2 1 1 3 3 3 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 ORF66742 - 7e-23 80.5 0.0 2e-22 79.0 0.0 1.9 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 ORF66742 - 4.3e-19 68.9 0.0 2.9e-13 50.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) Clp_N PF02861.20 ORF66742 - 1.9e-16 59.9 1.3 8e-15 54.7 1.2 2.9 2 0 0 2 2 2 1 Clp amino terminal domain, pathogenicity island component Sigma54_activat PF00158.26 ORF66742 - 1.5e-12 47.5 0.2 5.2e-05 23.0 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_16 PF13191.6 ORF66742 - 1.1e-11 45.4 6.6 1.7e-06 28.6 0.2 4.0 4 1 0 4 4 3 2 AAA ATPase domain TniB PF05621.11 ORF66742 - 1.2e-10 41.1 0.1 1.3e-07 31.2 0.0 3.6 2 2 1 3 3 3 1 Bacterial TniB protein AAA_22 PF13401.6 ORF66742 - 3.1e-07 30.7 2.5 0.027 14.7 0.0 4.1 2 2 0 2 2 2 2 AAA domain ResIII PF04851.15 ORF66742 - 2e-06 27.9 0.0 0.049 13.6 0.0 3.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit TIP49 PF06068.13 ORF66742 - 8.7e-06 25.2 0.1 0.14 11.3 0.0 2.7 2 1 0 2 2 2 2 TIP49 P-loop domain RuvB_N PF05496.12 ORF66742 - 1.5e-05 24.8 6.0 0.14 11.9 0.3 4.6 3 2 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF66742 - 1.8e-05 24.7 0.0 0.015 15.3 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF66742 - 3e-05 23.6 0.0 0.22 11.0 0.0 2.7 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_18 PF13238.6 ORF66742 - 4.2e-05 24.1 0.2 0.035 14.6 0.0 3.2 3 0 0 3 3 3 1 AAA domain IstB_IS21 PF01695.17 ORF66742 - 9.8e-05 22.2 0.0 0.074 12.8 0.0 2.5 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_3 PF07726.11 ORF66742 - 0.00027 20.8 0.1 0.0038 17.1 0.1 2.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 ORF66742 - 0.00028 20.4 3.3 5.5 6.3 0.1 4.3 3 2 2 5 5 5 0 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 ORF66742 - 0.00042 19.9 0.1 0.43 10.1 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_6 PF12774.7 ORF66742 - 0.00044 19.3 0.0 0.0011 18.0 0.0 1.6 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_33 PF13671.6 ORF66742 - 0.0011 19.2 0.0 0.32 11.2 0.0 2.9 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 ORF66742 - 0.0018 18.3 0.1 1.2 9.2 0.1 2.5 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 ORF66742 - 0.0032 17.4 0.0 1.2 9.0 0.0 2.6 2 0 0 2 2 2 1 RsgA GTPase RNA_helicase PF00910.22 ORF66742 - 0.0052 17.1 0.0 4.5 7.7 0.0 2.7 2 0 0 2 2 2 1 RNA helicase AAA_29 PF13555.6 ORF66742 - 0.011 15.4 0.0 3.1 7.6 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain Rad17 PF03215.15 ORF66742 - 0.023 14.6 0.0 0.62 10.0 0.0 2.5 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_23 PF13476.6 ORF66742 - 0.036 14.6 2.6 2.6 8.5 0.2 3.5 2 1 1 3 3 3 0 AAA domain NACHT PF05729.12 ORF66742 - 0.036 14.0 0.1 0.28 11.1 0.0 2.4 2 0 0 2 2 2 0 NACHT domain CbiA PF01656.23 ORF66742 - 0.04 14.0 0.1 11 6.1 0.0 2.6 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DNA_pol3_delta2 PF13177.6 ORF66742 - 0.063 13.1 0.2 6.3 6.5 0.0 3.6 4 0 0 4 4 4 0 DNA polymerase III, delta subunit CHAD PF05235.14 ORF66742 - 0.069 13.1 0.1 0.18 11.8 0.0 1.8 2 0 0 2 2 1 0 CHAD domain IPT PF01745.16 ORF66742 - 0.11 11.8 0.0 0.41 10.0 0.0 1.9 2 0 0 2 2 2 0 Isopentenyl transferase ATPase_2 PF01637.18 ORF66742 - 0.4 10.6 3.4 5.3 6.9 0.1 3.3 3 1 0 3 3 3 0 ATPase domain predominantly from Archaea Ion_trans PF00520.31 ORF38908 - 1.1e-11 44.4 23.5 1.9e-11 43.7 23.5 1.3 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF38908 - 8.5e-09 34.6 7.8 8.5e-09 34.6 7.8 2.5 1 1 1 2 2 2 2 Polycystin cation channel Mem_trans PF03547.18 ORF38908 - 0.23 9.8 4.9 0.04 12.3 0.4 2.0 2 0 0 2 2 2 0 Membrane transport protein TonB_dep_Rec PF00593.24 ORF62996 - 8.4e-57 194.1 37.4 8.4e-57 194.1 37.4 1.6 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 ORF62996 - 9.9e-29 100.1 1.3 9.9e-29 100.1 1.3 1.9 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain Spore_YhaL PF14147.6 ORF72861 - 6.4 6.5 5.9 43 3.9 5.9 2.5 1 0 0 1 1 1 0 Sporulation protein YhaL Spore_YhaL PF14147.6 ORF68664 - 6.4 6.5 5.9 43 3.9 5.9 2.5 1 0 0 1 1 1 0 Sporulation protein YhaL TMF_DNA_bd PF12329.8 ORF104381 - 0.0013 18.6 8.1 0.0013 18.6 8.1 8.3 2 1 6 9 9 9 2 TATA element modulatory factor 1 DNA binding TPR_MLP1_2 PF07926.12 ORF104381 - 0.0014 18.6 63.2 0.1 12.7 11.6 5.2 3 1 1 4 4 4 3 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 ORF104381 - 0.0016 17.4 85.0 0.0076 15.2 20.1 4.6 1 1 3 4 4 4 2 Spc7 kinetochore protein DUF1664 PF07889.12 ORF104381 - 0.0088 16.1 55.6 1.1 9.3 5.6 6.0 2 1 4 6 6 6 6 Protein of unknown function (DUF1664) CC2-LZ PF16516.5 ORF104381 - 0.019 15.3 3.3 0.019 15.3 3.3 7.9 2 2 5 7 7 7 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Mcp5_PH PF12814.7 ORF104381 - 0.06 13.5 0.7 0.34 11.0 0.7 2.3 1 0 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology Tropomyosin PF00261.20 ORF104381 - 0.088 12.2 79.1 0.18 11.1 14.0 4.1 1 1 3 4 4 4 0 Tropomyosin Fib_alpha PF08702.10 ORF104381 - 0.18 12.0 73.1 0.67 10.1 10.2 5.6 2 1 3 5 5 5 0 Fibrinogen alpha/beta chain family MAD PF05557.13 ORF104381 - 0.51 8.6 87.1 0.59 8.4 29.9 3.5 1 1 2 3 3 3 0 Mitotic checkpoint protein DUF948 PF06103.11 ORF104381 - 1.3 9.4 29.9 0.69 10.2 0.2 5.5 3 2 1 4 4 4 0 Bacterial protein of unknown function (DUF948) Dynein_C PF18199.1 ORF97809 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF97809 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF97809 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF78585 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF78585 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF78585 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_30 PF13604.6 ORF71537 - 1.4e-16 60.8 0.0 2.4e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF71537 - 8.8e-07 28.9 0.1 0.0012 18.7 0.0 2.3 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 ORF71537 - 1.4e-06 28.8 0.2 0.0001 22.7 0.2 2.3 1 1 0 1 1 1 1 AAA domain PIF1 PF05970.14 ORF71537 - 0.00015 21.0 0.0 0.0022 17.2 0.0 2.1 2 0 0 2 2 2 1 PIF1-like helicase AAA_22 PF13401.6 ORF71537 - 0.0002 21.6 0.1 0.00053 20.3 0.1 1.6 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 ORF71537 - 0.00027 20.5 0.0 0.00042 19.8 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 ORF71537 - 0.00033 21.1 0.1 0.001 19.5 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF71537 - 0.00042 20.5 0.0 0.016 15.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF71537 - 0.0011 18.4 0.0 0.0018 17.7 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_11 PF13086.6 ORF71537 - 0.0013 18.6 0.1 0.61 9.8 0.0 2.2 1 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF71537 - 0.002 18.1 0.0 0.0045 17.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF71537 - 0.0029 17.3 0.1 0.0051 16.6 0.1 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein GvpD PF07088.11 ORF71537 - 0.003 16.2 0.0 0.0045 15.7 0.0 1.2 1 0 0 1 1 1 1 GvpD gas vesicle protein AAA PF00004.29 ORF71537 - 0.004 17.6 0.0 0.0076 16.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MobB PF03205.14 ORF71537 - 0.005 16.7 0.1 0.0089 15.9 0.1 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 ORF71537 - 0.0067 16.4 0.1 0.012 15.6 0.1 1.4 1 0 0 1 1 1 1 NTPase Zeta_toxin PF06414.12 ORF71537 - 0.0067 15.7 0.0 0.012 14.9 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin MeaB PF03308.16 ORF71537 - 0.0081 15.2 0.0 0.013 14.5 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 ORF71537 - 0.027 14.4 0.0 0.062 13.2 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_18 PF13238.6 ORF71537 - 0.028 15.0 0.0 0.067 13.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF71537 - 0.053 13.5 0.0 0.34 10.9 0.0 2.0 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 ORF71537 - 0.075 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 ORF71537 - 0.083 12.1 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TrwB_AAD_bind PF10412.9 ORF71537 - 0.088 11.7 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain APS_kinase PF01583.20 ORF71537 - 0.22 11.4 0.0 0.42 10.5 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase ATPase PF06745.13 ORF71537 - 0.27 10.6 0.0 0.45 9.8 0.0 1.2 1 0 0 1 1 1 0 KaiC Aquarius_N PF16399.5 ORF58812 - 6.2e-32 110.6 0.0 1e-31 109.8 0.0 1.4 1 0 0 1 1 1 1 Intron-binding protein aquarius N-terminus AAA_12 PF13087.6 ORF58812 - 5.8e-26 91.3 0.0 1.1e-25 90.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF58812 - 7.2e-26 91.5 0.0 4.2e-25 89.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF58812 - 2.7e-09 37.5 0.0 4.1e-08 33.7 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF58812 - 1.4e-08 34.6 0.0 0.00026 20.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain ResIII PF04851.15 ORF58812 - 0.00043 20.3 0.0 0.00081 19.4 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit UvrD_C_2 PF13538.6 ORF58812 - 0.0024 17.6 0.1 0.0052 16.6 0.1 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_22 PF13401.6 ORF58812 - 0.0046 17.2 0.1 0.067 13.5 0.0 2.7 2 1 1 3 3 3 1 AAA domain AAA PF00004.29 ORF58812 - 0.0056 17.1 0.0 0.021 15.2 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) UvrD-helicase PF00580.21 ORF58812 - 0.071 12.6 0.0 0.12 11.8 0.0 1.6 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain AAA_16 PF13191.6 ORF58812 - 0.076 13.4 0.0 0.27 11.6 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain PhoH PF02562.16 ORF58812 - 0.088 12.3 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_5 PF07728.14 ORF58812 - 0.12 12.4 0.0 0.89 9.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DEAD PF00270.29 ORF58812 - 0.19 11.5 0.0 0.42 10.4 0.0 1.6 2 0 0 2 2 2 0 DEAD/DEAH box helicase GTP_EFTU PF00009.27 ORF56858 - 3.2e-32 111.7 0.1 4.1e-31 108.0 0.1 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 ORF56858 - 5.7e-20 71.4 0.1 2.8e-19 69.2 0.1 2.3 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 ORF56858 - 4.5e-10 39.3 1.1 9.4e-10 38.3 0.1 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 ORF56858 - 2.8e-08 34.0 2.3 4.2e-07 30.3 0.1 3.1 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF56858 - 3.5e-07 30.3 0.0 1e-06 28.8 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 ORF56858 - 0.00045 20.4 0.0 0.0013 18.9 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF56858 - 0.00085 19.2 0.0 0.0029 17.4 0.0 2.0 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF56858 - 0.097 13.0 0.3 1.1 9.5 0.3 2.4 1 1 0 1 1 1 0 AAA domain Mit_KHE1 PF10173.9 ORF56858 - 0.95 9.5 5.3 1.9 8.5 5.3 1.5 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Dynein_C PF18199.1 ORF53955 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF53955 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF53955 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF50022 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF50022 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF50022 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF49796 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF49796 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF49796 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF42133 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF42133 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF42133 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain GTP_EFTU PF00009.27 ORF41338 - 3.2e-32 111.7 0.1 4.1e-31 108.0 0.1 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 ORF41338 - 5.7e-20 71.4 0.1 2.8e-19 69.2 0.1 2.3 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 ORF41338 - 4.5e-10 39.3 1.1 9.4e-10 38.3 0.1 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 ORF41338 - 2.8e-08 34.0 2.3 4.2e-07 30.3 0.1 3.1 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF41338 - 3.5e-07 30.3 0.0 1e-06 28.8 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 ORF41338 - 0.00045 20.4 0.0 0.0013 18.9 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF41338 - 0.00085 19.2 0.0 0.0029 17.4 0.0 2.0 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF41338 - 0.097 13.0 0.3 1.1 9.5 0.3 2.4 1 1 0 1 1 1 0 AAA domain Mit_KHE1 PF10173.9 ORF41338 - 0.95 9.5 5.3 1.9 8.5 5.3 1.5 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Dynein_C PF18199.1 ORF33921 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF33921 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF33921 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF19667 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF19667 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF19667 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF12351 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF12351 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF12351 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain GTP_EFTU PF00009.27 ORF112487 - 3.2e-32 111.7 0.1 4.1e-31 108.0 0.1 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 ORF112487 - 5.7e-20 71.4 0.1 2.8e-19 69.2 0.1 2.3 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 ORF112487 - 4.5e-10 39.3 1.1 9.4e-10 38.3 0.1 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 ORF112487 - 2.8e-08 34.0 2.3 4.2e-07 30.3 0.1 3.1 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF112487 - 3.5e-07 30.3 0.0 1e-06 28.8 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 ORF112487 - 0.00045 20.4 0.0 0.0013 18.9 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF112487 - 0.00085 19.2 0.0 0.0029 17.4 0.0 2.0 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF112487 - 0.097 13.0 0.3 1.1 9.5 0.3 2.4 1 1 0 1 1 1 0 AAA domain Mit_KHE1 PF10173.9 ORF112487 - 0.95 9.5 5.3 1.9 8.5 5.3 1.5 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Peptidase_M16_M PF16187.5 ORF11026 - 2e-72 243.9 0.1 1.1e-71 241.5 0.0 2.2 3 0 0 3 3 3 1 Middle or third domain of peptidase_M16 Peptidase_M16_C PF05193.21 ORF11026 - 6e-08 32.9 0.1 0.0046 17.0 0.0 2.8 3 0 0 3 3 3 2 Peptidase M16 inactive domain Ly-6_related PF06579.12 ORF11026 - 0.029 14.6 0.0 0.067 13.4 0.0 1.5 1 0 0 1 1 1 0 Caenorhabditis elegans ly-6-related protein Dynein_C PF18199.1 ORF100241 - 1.9e-87 293.4 0.0 2.6e-87 292.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF100241 - 5.3e-51 172.7 0.0 8.9e-51 172.0 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF100241 - 7.2e-33 113.2 0.1 2.6e-32 111.4 0.0 2.0 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain MS_channel PF00924.18 ORF93177 - 2.4e-44 151.3 1.8 4.8e-44 150.4 1.8 1.5 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF2569 PF10754.9 ORF93177 - 3.8 7.9 26.5 1.4 9.3 6.0 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2569) COG4 PF08318.12 ORF60181 - 2.5e-55 187.9 1.7 2.2e-30 105.9 0.0 2.9 2 1 1 3 3 3 2 COG4 transport protein Sec10 PF07393.11 ORF60181 - 4.5e-10 38.6 6.7 8.9e-08 31.0 0.9 2.5 2 1 1 3 3 3 2 Exocyst complex component Sec10 RINT1_TIP1 PF04437.13 ORF60181 - 9.9e-07 28.0 0.9 3.1e-06 26.4 0.9 1.8 1 0 0 1 1 1 1 RINT-1 / TIP-1 family SirA PF10747.9 ORF60181 - 0.046 14.1 0.1 0.1 12.9 0.1 1.6 1 0 0 1 1 1 0 Sporulation inhibitor of replication protein SirA Efg1 PF10153.9 ORF60181 - 0.058 13.8 0.0 0.24 11.8 0.0 2.1 1 0 0 1 1 1 0 rRNA-processing protein Efg1 RP-C_C PF11800.8 ORF60181 - 0.11 12.5 1.3 16 5.5 0.0 3.8 4 0 0 4 4 4 0 Replication protein C C-terminal region DUF948 PF06103.11 ORF60181 - 0.57 10.5 4.6 5.4 7.4 0.0 3.9 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF948) TBCC_N PF16752.5 ORF60181 - 0.8 10.2 19.1 7.9 7.0 0.4 5.7 6 0 0 6 6 6 0 Tubulin-specific chaperone C N-terminal domain DUF4116 PF13475.6 ORF89306 - 2.2e-25 88.1 0.0 3.3e-08 33.1 0.1 5.4 2 2 2 5 5 5 5 Domain of unknown function (DUF4116) KR PF08659.10 ORF89306 - 0.00043 20.2 0.1 0.0008 19.4 0.1 1.5 1 0 0 1 1 1 1 KR domain Skp1 PF01466.19 ORF89306 - 0.0031 17.6 0.0 0.0076 16.4 0.0 1.6 1 0 0 1 1 1 1 Skp1 family, dimerisation domain CD36 PF01130.21 ORF32405 - 1.4e-26 93.1 6.4 1.9e-26 92.6 6.4 1.2 1 0 0 1 1 1 1 CD36 family DUF2500 PF10694.9 ORF32405 - 0.086 13.4 0.2 0.19 12.2 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) COG4 PF08318.12 ORF6332 - 2.4e-55 187.9 1.7 2.2e-30 105.9 0.0 3.0 2 1 1 3 3 3 2 COG4 transport protein Sec10 PF07393.11 ORF6332 - 1.4e-10 40.3 6.9 2.7e-08 32.7 1.1 2.5 2 1 1 3 3 3 2 Exocyst complex component Sec10 RINT1_TIP1 PF04437.13 ORF6332 - 7.7e-07 28.4 0.9 2.5e-06 26.7 0.9 1.8 1 0 0 1 1 1 1 RINT-1 / TIP-1 family SirA PF10747.9 ORF6332 - 0.044 14.1 0.1 0.098 13.0 0.1 1.6 1 0 0 1 1 1 0 Sporulation inhibitor of replication protein SirA Efg1 PF10153.9 ORF6332 - 0.056 13.8 0.0 0.23 11.8 0.0 2.1 1 0 0 1 1 1 0 rRNA-processing protein Efg1 DUF948 PF06103.11 ORF6332 - 0.56 10.5 4.6 5.3 7.4 0.0 3.9 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF948) RP-C_C PF11800.8 ORF6332 - 0.58 10.2 3.9 16 5.5 0.0 3.9 4 1 0 4 4 4 0 Replication protein C C-terminal region TBCC_N PF16752.5 ORF6332 - 0.71 10.3 19.1 7.8 7.0 0.4 5.7 6 0 0 6 6 6 0 Tubulin-specific chaperone C N-terminal domain Pyr_redox_2 PF07992.14 ORF9792 - 1.6e-46 158.9 0.0 2.1e-46 158.5 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_20 PF14691.6 ORF9792 - 7e-17 61.2 18.9 4.1e-16 58.8 0.5 3.2 2 2 2 4 4 4 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_3 PF13738.6 ORF9792 - 5e-13 49.0 0.1 6.4e-08 32.2 0.0 2.2 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF9792 - 7.4e-09 35.7 1.1 4.7e-08 33.1 0.1 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 ORF9792 - 1.4e-08 35.1 0.2 0.01 16.4 0.0 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF9792 - 2.7e-06 26.8 0.2 0.00031 20.1 0.0 2.3 2 0 0 2 2 2 1 Thi4 family DAO PF01266.24 ORF9792 - 2.1e-05 24.3 0.3 2.1e-05 24.3 0.3 2.4 2 1 1 3 3 3 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF9792 - 5.7e-05 22.5 1.2 5.9e-05 22.5 0.2 1.5 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 ORF9792 - 7e-05 22.1 0.6 7e-05 22.1 0.6 2.1 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 ORF9792 - 0.00029 20.1 0.1 0.00029 20.1 0.1 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 ORF9792 - 0.0011 18.4 0.6 0.0011 18.4 0.6 2.0 3 0 0 3 3 3 1 FAD dependent oxidoreductase HI0933_like PF03486.14 ORF9792 - 0.0012 17.7 0.3 0.0012 17.7 0.3 1.9 2 0 0 2 2 2 1 HI0933-like protein Fer4_9 PF13187.6 ORF9792 - 0.0016 18.6 10.9 0.0016 18.6 10.9 3.3 2 2 2 4 4 3 1 4Fe-4S dicluster domain ApbA PF02558.16 ORF9792 - 0.0046 16.6 0.0 0.011 15.4 0.0 1.7 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA PALP PF00291.25 ORF9792 - 0.0065 15.9 0.0 0.2 11.0 0.0 2.2 2 0 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme Fer4_10 PF13237.6 ORF9792 - 0.01 15.9 2.4 0.01 15.9 2.4 3.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Rossmann-like PF10727.9 ORF9792 - 0.017 15.0 0.3 0.29 11.0 0.1 2.3 2 0 0 2 2 2 0 Rossmann-like domain Fer4_7 PF12838.7 ORF9792 - 0.017 15.7 13.3 0.017 15.7 13.3 3.5 3 1 0 3 3 3 0 4Fe-4S dicluster domain Amino_oxidase PF01593.24 ORF9792 - 0.024 13.9 0.1 0.04 13.2 0.1 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase 3HCDH_N PF02737.18 ORF9792 - 0.026 14.4 0.4 0.062 13.2 0.1 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K_oxygenase PF13434.6 ORF9792 - 0.039 13.1 0.0 0.15 11.1 0.0 1.8 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.6 ORF9792 - 0.043 14.3 0.0 8.8 6.8 0.0 2.5 2 0 0 2 2 2 0 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 ORF9792 - 0.09 12.8 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Shikimate_DH PF01488.20 ORF9792 - 0.15 12.1 0.0 2.1 8.4 0.0 2.4 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase FMO-like PF00743.19 ORF9792 - 0.17 10.3 0.0 5.2 5.4 0.0 2.0 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like Fer4_16 PF13484.6 ORF9792 - 0.19 12.7 19.9 0.16 12.9 0.6 3.7 3 1 2 5 5 2 0 4Fe-4S double cluster binding domain AlaDh_PNT_C PF01262.21 ORF9792 - 0.27 10.5 0.7 2.5 7.3 0.1 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Fer4_21 PF14697.6 ORF9792 - 1.3 9.2 14.5 0.091 12.9 8.8 2.1 2 0 0 2 2 1 0 4Fe-4S dicluster domain Fer4 PF00037.27 ORF9792 - 1.4 8.9 22.6 0.069 13.0 3.3 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 ORF9792 - 9.9 6.5 33.3 0.066 13.3 1.6 4.0 4 0 0 4 4 3 0 4Fe-4S binding domain Dimer_Tnp_hAT PF05699.14 ORF56559 - 0.011 15.6 0.0 0.026 14.3 0.0 1.6 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region HSP90 PF00183.18 ORF33586 - 4.3e-100 336.1 9.0 2.5e-98 330.2 4.9 2.1 1 1 1 2 2 2 2 Hsp90 protein HATPase_c_3 PF13589.6 ORF33586 - 3.1e-10 40.0 0.9 5.4e-10 39.2 0.1 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 ORF33586 - 6.7e-10 39.5 0.7 6.9e-09 36.2 0.2 2.5 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DinB PF05163.12 ORF33586 - 0.032 14.2 0.5 0.69 9.8 0.0 2.4 2 0 0 2 2 2 0 DinB family ubiquitin PF00240.23 ORF20387 - 1.7e-08 34.1 0.1 3.7e-08 33.0 0.1 1.6 1 0 0 1 1 1 1 Ubiquitin family DUF2407 PF10302.9 ORF20387 - 0.013 16.1 0.4 0.013 16.1 0.4 2.8 3 0 0 3 3 3 0 DUF2407 ubiquitin-like domain Dimer_Tnp_Tn5 PF02281.16 ORF45064 - 1.3e-20 73.0 0.2 3e-20 71.9 0.2 1.5 1 0 0 1 1 1 1 Transposase Tn5 dimerisation domain DDE_Tnp_1 PF01609.21 ORF45064 - 1.4e-17 64.0 0.0 2.8e-17 63.1 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain Tnp_DNA_bind PF14706.6 ORF45064 - 7e-15 54.6 0.0 1.8e-14 53.4 0.0 1.7 1 0 0 1 1 1 1 Transposase DNA-binding Intein_splicing PF14890.6 ORF45064 - 3.2e-09 36.8 0.0 5.1e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Intein splicing domain CBM_5_12 PF02839.14 ORF45064 - 1.1 10.0 5.1 0.29 11.8 0.6 2.5 2 0 0 2 2 2 0 Carbohydrate binding domain Dimer_Tnp_Tn5 PF02281.16 ORF42354 - 1.3e-20 73.0 0.2 3e-20 71.9 0.2 1.5 1 0 0 1 1 1 1 Transposase Tn5 dimerisation domain DDE_Tnp_1 PF01609.21 ORF42354 - 1.4e-17 64.0 0.0 2.8e-17 63.1 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain Tnp_DNA_bind PF14706.6 ORF42354 - 7e-15 54.6 0.0 1.8e-14 53.4 0.0 1.7 1 0 0 1 1 1 1 Transposase DNA-binding Intein_splicing PF14890.6 ORF42354 - 3.2e-09 36.8 0.0 5.1e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Intein splicing domain CBM_5_12 PF02839.14 ORF42354 - 1.1 10.0 5.1 0.29 11.8 0.6 2.5 2 0 0 2 2 2 0 Carbohydrate binding domain Dimer_Tnp_Tn5 PF02281.16 ORF107613 - 1.3e-20 73.0 0.2 3e-20 71.9 0.2 1.5 1 0 0 1 1 1 1 Transposase Tn5 dimerisation domain DDE_Tnp_1 PF01609.21 ORF107613 - 1.4e-17 64.0 0.0 2.8e-17 63.1 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain Tnp_DNA_bind PF14706.6 ORF107613 - 7e-15 54.6 0.0 1.8e-14 53.4 0.0 1.7 1 0 0 1 1 1 1 Transposase DNA-binding Intein_splicing PF14890.6 ORF107613 - 3.2e-09 36.8 0.0 5.1e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Intein splicing domain CBM_5_12 PF02839.14 ORF107613 - 1.1 10.0 5.1 0.29 11.8 0.6 2.5 2 0 0 2 2 2 0 Carbohydrate binding domain TAFH PF07531.14 ORF63329 - 0.028 14.5 0.1 0.14 12.3 0.1 2.2 1 0 0 1 1 1 0 NHR1 homology to TAF Glyco_hydro_46 PF01374.18 ORF63329 - 0.37 10.4 5.4 12 5.4 0.0 3.5 2 1 1 3 3 3 0 Glycosyl hydrolase family 46 CPG4 PF15481.6 ORF63329 - 8.3 7.1 11.9 0.65 10.7 0.3 3.9 3 1 0 3 3 3 0 Chondroitin proteoglycan 4 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks4.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks4.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks4.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks4.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:10:21 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- S1-P1_nuclease PF02265.16 ORF63981 - 1.1e-51 176.1 0.4 1.4e-51 175.8 0.4 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease EF-hand_1 PF00036.32 ORF63645 - 2.5e-15 54.8 8.1 2.1e-05 23.7 0.1 3.7 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF63645 - 5.2e-15 54.0 3.0 2.3e-06 27.1 0.0 4.3 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF63645 - 5.4e-15 55.6 9.4 2.1e-08 34.5 0.7 2.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF63645 - 1.7e-13 50.2 10.4 4.3e-10 39.3 0.3 3.6 2 1 2 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF63645 - 1.5e-06 27.4 7.0 0.0017 17.8 0.1 3.9 3 1 0 3 3 3 2 EF hand DUF1257 PF06868.11 ORF63645 - 0.0097 16.2 1.9 0.99 9.7 0.1 2.4 2 1 0 2 2 2 2 Protein of unknown function (DUF1257) EF-hand_4 PF12763.7 ORF63645 - 0.13 12.2 8.8 8.5 6.4 0.0 3.7 2 1 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand S1-P1_nuclease PF02265.16 ORF58847 - 1.1e-51 176.1 0.4 1.4e-51 175.8 0.4 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease 2-oxoacid_dh PF00198.23 ORF56393 - 2.9e-51 174.2 0.0 3.6e-51 173.9 0.0 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CarboxypepD_reg PF13620.6 ORF52852 - 8.7e-15 54.8 0.5 1.4e-07 31.7 0.1 2.9 3 0 0 3 3 3 2 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 ORF52852 - 7.4e-07 29.1 0.3 0.04 13.9 0.0 2.7 2 0 0 2 2 2 2 CarboxypepD_reg-like domain SdrD_B PF17210.3 ORF52852 - 1.4e-06 28.5 0.2 0.0036 17.5 0.0 2.5 2 0 0 2 2 2 2 SdrD B-like domain SpaA PF17802.1 ORF52852 - 9.8e-05 22.6 0.2 0.37 11.1 0.0 2.6 2 0 0 2 2 2 2 Prealbumin-like fold domain MG4 PF17789.1 ORF52852 - 0.0002 21.4 0.2 0.17 12.1 0.0 2.7 2 1 1 3 3 3 2 Macroglobulin domain MG4 bMG3 PF11974.8 ORF52852 - 0.0002 21.3 0.0 0.011 15.8 0.0 2.3 2 0 0 2 2 2 1 Bacterial alpha-2-macroglobulin MG3 domain DUF2012 PF09430.10 ORF52852 - 0.0012 18.9 0.3 0.02 15.0 0.1 2.6 2 1 1 3 3 3 1 Protein of unknown function (DUF2012) Big_1 PF02369.16 ORF52852 - 0.008 16.2 0.6 4.4 7.4 0.2 2.4 2 0 0 2 2 2 2 Bacterial Ig-like domain (group 1) MucBP_2 PF17965.1 ORF52852 - 0.013 16.1 1.8 0.14 12.8 0.1 2.7 3 0 0 3 3 3 0 Mucin binding domain fn3 PF00041.21 ORF52852 - 0.03 14.7 0.1 0.081 13.3 0.1 1.7 1 0 0 1 1 1 0 Fibronectin type III domain FAD_binding_7 PF03441.14 ORF50755 - 3.5e-42 144.2 0.2 4.7e-42 143.8 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase Ribosomal_S20p PF01649.18 ORF42683 - 5.5e-12 46.2 1.5 1.1e-11 45.2 1.5 1.4 1 0 0 1 1 1 1 Ribosomal protein S20 DS PF01916.17 ORF42683 - 0.16 11.1 0.1 0.23 10.7 0.1 1.1 1 0 0 1 1 1 0 Deoxyhypusine synthase FAM180 PF15173.6 ORF41846 - 0.0064 16.5 0.3 0.013 15.5 0.1 1.5 1 1 0 1 1 1 1 FAM180 family G-7-MTase PF12803.7 ORF41846 - 0.03 13.5 0.2 0.038 13.2 0.2 1.2 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) RFX1_trans_act PF04589.13 ORF41846 - 0.2 11.9 0.4 18 5.5 0.5 2.4 2 0 0 2 2 2 0 RFX1 transcription activation region Gluconate_2-dh3 PF13618.6 ORF41846 - 0.2 11.9 1.2 0.31 11.3 1.2 1.3 1 0 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 Peptidase_C97 PF05903.14 ORF38365 - 0.0094 15.8 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 1 PPPDE putative peptidase domain HpcH_HpaI PF03328.14 ORF38229 - 7.9e-84 280.2 0.3 2.2e-83 278.8 0.1 1.7 2 0 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 ORF38229 - 7.2e-10 38.5 0.1 2.8e-07 30.0 0.0 2.4 3 0 0 3 3 3 2 C-C_Bond_Lyase of the TIM-Barrel fold Ribosomal_L5_C PF00673.21 ORF37082 - 9.9e-17 60.9 0.0 1.7e-16 60.2 0.0 1.4 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Pirin PF02678.16 ORF34965 - 8e-21 74.0 0.3 1.3e-20 73.4 0.3 1.3 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 ORF34965 - 7.1e-19 68.1 0.0 1.1e-18 67.5 0.0 1.3 1 0 0 1 1 1 1 Pirin C-terminal cupin domain Ribosomal_L13 PF00572.18 ORF27948 - 4.5e-34 117.4 0.0 1.1e-33 116.2 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L13 Gly-zipper_OmpA PF13436.6 ORF23108 - 0.73 9.7 13.7 2.4 8.0 13.7 1.9 1 0 0 1 1 1 0 Glycine-zipper domain Porin_3 PF01459.22 ORF21962 - 2.5e-13 50.1 4.9 2.9e-13 49.9 4.9 1.1 1 0 0 1 1 1 1 Eukaryotic porin Ldh_1_C PF02866.18 ORF16092 - 2.6e-40 138.1 0.0 3.6e-40 137.6 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 ORF16092 - 1.3e-25 90.2 0.0 2e-25 89.5 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain RCC1_2 PF13540.6 ORF12639 - 2.2e-17 62.4 27.0 0.0054 16.5 0.5 7.5 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat Cerato-platanin PF07249.12 ORF12639 - 0.033 14.3 7.6 0.73 10.0 0.4 3.8 2 2 2 4 4 4 0 Cerato-platanin S1-P1_nuclease PF02265.16 ORF11279 - 1.1e-51 176.1 0.4 1.4e-51 175.8 0.4 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease ABC_tran PF00005.27 ORF110864 - 7.5e-28 97.8 0.0 1.4e-27 96.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF110864 - 6.6e-08 32.3 2.6 6.3e-06 25.8 1.2 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF110864 - 0.00072 19.6 0.6 0.0025 17.9 0.6 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA PF00004.29 ORF110864 - 0.0017 18.8 1.8 0.1 13.0 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 ORF110864 - 0.0083 15.1 0.0 0.012 14.6 0.0 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_21 PF13304.6 ORF110864 - 0.0095 15.8 0.2 2.5 7.8 0.0 2.2 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF110864 - 0.021 14.6 0.0 0.045 13.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF87 PF01935.17 ORF110864 - 0.023 14.8 0.3 0.065 13.3 0.0 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain DUF815 PF05673.13 ORF110864 - 0.027 13.6 0.0 0.057 12.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) NB-ARC PF00931.22 ORF110864 - 0.029 13.6 2.2 0.075 12.2 2.1 1.7 1 1 0 1 1 1 0 NB-ARC domain AAA_5 PF07728.14 ORF110864 - 0.031 14.3 0.3 8.6 6.4 0.0 2.8 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF110864 - 0.044 13.5 0.2 2 8.1 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein RNA_helicase PF00910.22 ORF110864 - 0.05 14.0 0.2 1.2 9.6 0.0 2.5 2 0 0 2 2 2 0 RNA helicase AAA_23 PF13476.6 ORF110864 - 0.068 13.7 1.7 0.16 12.5 1.6 1.8 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 ORF110864 - 0.075 12.9 1.1 0.21 11.5 0.1 2.0 2 0 0 2 2 2 0 NTPase ATP_bind_1 PF03029.17 ORF110864 - 0.084 12.6 0.3 0.4 10.4 0.0 2.0 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF110864 - 0.089 13.1 0.2 0.22 11.8 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF110864 - 0.1 12.3 1.4 0.15 11.8 1.2 1.4 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF110864 - 0.12 13.0 0.1 0.33 11.5 0.1 1.7 1 1 0 1 1 1 0 AAA domain CbiA PF01656.23 ORF110864 - 0.18 11.9 0.1 0.35 10.9 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain S1-P1_nuclease PF02265.16 ORF110736 - 1.1e-51 176.1 0.4 1.4e-51 175.8 0.4 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease AhpC-TSA PF00578.21 ORF110150 - 7.1e-11 42.1 0.0 1e-10 41.6 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.9 ORF110150 - 3.2e-06 26.9 0.0 7.8e-06 25.6 0.0 1.7 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.10 ORF110150 - 0.0047 16.6 0.0 0.0064 16.2 0.0 1.2 1 0 0 1 1 1 1 Redoxin Methyltransf_11 PF08241.12 ORF107441 - 4.3e-23 81.8 0.3 2e-22 79.7 0.1 2.1 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF107441 - 4.2e-21 75.4 0.2 2.4e-20 73.0 0.1 2.2 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF107441 - 1.3e-15 57.3 0.0 2e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 ORF107441 - 5.7e-14 52.2 0.0 9.8e-14 51.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF107441 - 4.7e-11 42.8 0.0 6.9e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF107441 - 1.9e-09 38.1 0.0 3.7e-09 37.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF107441 - 5e-05 22.7 0.0 7.6e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 ORF107441 - 0.00016 21.3 0.0 0.00049 19.7 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase small domain adh_short_C2 PF13561.6 ORF107441 - 0.00065 19.3 0.1 0.0034 17.0 0.2 1.9 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase Methyltransf_29 PF03141.16 ORF107441 - 0.0028 16.3 0.0 0.0063 15.1 0.0 1.6 2 1 0 2 2 2 1 Putative S-adenosyl-L-methionine-dependent methyltransferase adh_short PF00106.25 ORF107441 - 0.038 13.5 0.0 2.3 7.6 0.2 2.2 1 1 1 2 2 2 0 short chain dehydrogenase UPF0020 PF01170.18 ORF107441 - 0.047 13.4 0.0 0.085 12.5 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_8 PF05148.15 ORF107441 - 0.1 12.4 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase Ank_2 PF12796.7 ORF106945 - 2.2e-53 178.8 0.4 3e-12 46.9 0.2 5.1 2 1 3 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF106945 - 4.6e-53 176.9 8.2 1.1e-08 35.4 0.0 7.7 2 2 7 9 9 9 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF106945 - 1.5e-38 126.4 0.7 0.00085 19.6 0.0 9.1 9 0 0 9 9 9 9 Ankyrin repeat Ank_5 PF13857.6 ORF106945 - 6.2e-38 128.4 6.0 6.9e-06 26.2 0.0 7.5 3 1 5 8 8 8 8 Ankyrin repeats (many copies) Ank PF00023.30 ORF106945 - 1.6e-37 126.3 10.1 5.9e-05 23.3 0.0 9.1 9 0 0 9 9 9 8 Ankyrin repeat DUF3107 PF11305.8 ORF106945 - 0.089 13.1 0.0 1.1 9.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3107) MycE_N PF17843.1 ORF106945 - 1.8 9.1 5.5 9.7 6.7 0.3 3.9 3 2 2 5 5 5 0 MycE methyltransferase N-terminal Cytidylate_kin PF02224.18 ORF105825 - 6e-08 32.7 0.1 0.00028 20.7 0.0 2.2 2 0 0 2 2 2 2 Cytidylate kinase AAA_30 PF13604.6 ORF105825 - 0.0086 15.8 0.0 0.022 14.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF105825 - 0.04 14.3 0.3 0.1 13.0 0.1 2.0 1 1 1 2 2 2 0 AAA ATPase domain AAA_17 PF13207.6 ORF105825 - 0.041 14.3 2.6 0.093 13.2 0.0 2.6 3 0 0 3 3 3 0 AAA domain Rad17 PF03215.15 ORF105825 - 0.049 13.6 0.0 0.081 12.8 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain ADK PF00406.22 ORF105825 - 0.058 13.5 0.4 0.25 11.5 0.0 2.2 3 0 0 3 3 3 0 Adenylate kinase Zeta_toxin PF06414.12 ORF105825 - 0.1 11.9 0.1 2.1 7.6 0.0 2.2 2 0 0 2 2 2 0 Zeta toxin AAA_22 PF13401.6 ORF105825 - 0.16 12.2 0.2 0.45 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain Peptidase_U4 PF03419.13 ORF102872 - 0.033 13.5 0.4 0.056 12.7 0.4 1.3 1 0 0 1 1 1 0 Sporulation factor SpoIIGA TPR_19 PF14559.6 ORF102672 - 2.1e-06 28.1 1.8 5.8e-06 26.7 1.8 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF102672 - 0.002 17.8 0.0 0.43 10.5 0.1 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF102672 - 0.0024 17.8 1.4 1.6 9.0 0.1 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF102672 - 0.0031 17.7 0.3 0.0084 16.3 0.0 1.8 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF102672 - 0.008 16.9 0.2 0.008 16.9 0.2 3.9 3 1 1 4 4 4 2 Tetratricopeptide repeat PNP_UDP_1 PF01048.20 ORF102672 - 0.014 14.7 0.0 0.067 12.4 0.0 2.0 2 0 0 2 2 2 0 Phosphorylase superfamily TPR_12 PF13424.6 ORF102672 - 0.015 15.5 0.8 0.055 13.8 0.4 2.2 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF102672 - 0.096 12.4 0.0 1.1 9.0 0.0 2.4 2 0 0 2 2 2 0 TPR repeat TPR_16 PF13432.6 ORF102672 - 0.32 11.7 0.2 0.32 11.7 0.2 3.4 3 1 1 4 4 4 0 Tetratricopeptide repeat BPL_LplA_LipB PF03099.19 ORF102296 - 1.6e-15 57.1 0.0 2.1e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.17 ORF102296 - 1.3e-05 25.0 0.1 5.4e-05 23.0 0.0 2.1 2 0 0 2 2 2 1 Biotin protein ligase C terminal domain Cyt-b5 PF00173.28 ORF10175 - 1.6e-08 34.6 0.0 3.2e-08 33.6 0.0 1.6 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DUF3039 PF11238.8 ORF100324 - 0.13 12.1 0.1 1.2 8.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) Pkinase PF00069.25 ORF100324 - 0.23 10.8 0.0 0.34 10.2 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain FAD_binding_7 PF03441.14 ORF100292 - 3.5e-42 144.2 0.2 4.7e-42 143.8 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase SecY PF00344.20 NODE_22046_length_921_cov_3.855530_g17020_i0reverse_frame_3 - 4.9e-86 288.8 15.6 5.7e-86 288.5 15.6 1.1 1 0 0 1 1 1 1 SecY translocase Orf78 PF06024.12 NODE_22046_length_921_cov_3.855530_g17020_i0reverse_frame_3 - 0.14 12.5 0.5 0.36 11.1 0.5 1.7 1 0 0 1 1 1 0 Orf78 (ac78) TssN PF17555.2 NODE_22046_length_921_cov_3.855530_g17020_i0reverse_frame_3 - 2 7.7 9.4 0.032 13.6 2.4 1.6 2 0 0 2 2 2 0 Type VI secretion system, TssN DUF1129 PF06570.11 NODE_22046_length_921_cov_3.855530_g17020_i0reverse_frame_3 - 4.5 6.7 9.9 6.4 6.2 4.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) HECT PF00632.25 ORF997 - 1.3e-09 37.9 0.0 1.8e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Ank_2 PF12796.7 ORF9871 - 5.8e-17 62.1 0.0 6.6e-10 39.4 0.0 2.7 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF9871 - 5.7e-14 52.0 1.5 4.9e-06 26.7 0.1 3.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF9871 - 1e-12 47.0 0.2 0.001 19.3 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF9871 - 1.3e-09 38.0 5.4 0.0024 18.3 0.2 4.8 6 0 0 6 6 6 2 Ankyrin repeat Ank_4 PF13637.6 ORF9871 - 1.4e-08 35.1 0.2 0.0031 18.0 0.1 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) TFIIA PF03153.13 ORF93568 - 3.8 7.4 39.8 5.1 7.0 39.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF2207 PF09972.9 ORF93568 - 4.5 5.9 5.1 1.2 7.8 1.3 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) TPR_MLP1_2 PF07926.12 ORF92171 - 8.3e-06 25.9 23.5 0.0085 16.2 1.2 2.5 1 1 2 3 3 3 3 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 ORF92171 - 0.00056 18.9 24.2 0.0011 17.9 14.1 2.1 1 1 1 2 2 2 2 Spc7 kinetochore protein Golgin_A5 PF09787.9 ORF92171 - 0.0024 17.4 27.0 0.0074 15.8 7.0 2.1 1 1 1 2 2 2 1 Golgin subfamily A member 5 DUF3573 PF12097.8 ORF92171 - 0.0036 16.2 4.0 0.0036 16.2 4.0 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF3573) TMF_TATA_bd PF12325.8 ORF92171 - 0.005 17.0 20.5 0.41 10.9 2.1 2.8 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding MIP-T3_C PF17749.1 ORF92171 - 0.0096 15.9 1.9 0.0096 15.9 1.9 3.3 1 1 1 3 3 3 1 Microtubule-binding protein MIP-T3 C-terminal region FliE PF02049.18 ORF92171 - 0.013 15.6 1.2 0.013 15.6 1.2 3.1 2 1 0 2 2 2 0 Flagellar hook-basal body complex protein FliE CENP-H PF05837.12 ORF92171 - 0.075 13.4 21.6 0.062 13.7 7.6 3.0 1 1 1 3 3 3 0 Centromere protein H (CENP-H) FUSC PF04632.12 ORF92171 - 0.079 11.5 6.4 0.093 11.3 6.4 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF4407 PF14362.6 ORF92171 - 0.1 11.9 17.1 0.31 10.4 17.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3708 PF12501.8 ORF92171 - 0.14 11.9 5.9 0.12 12.1 0.5 2.4 1 1 1 2 2 2 0 Phosphate ATP-binding cassette transporter CENP-F_leu_zip PF10473.9 ORF92171 - 0.18 11.8 22.1 0.24 11.4 5.4 2.5 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Phage_Mu_Gam PF07352.12 ORF92171 - 0.2 11.6 17.4 0.078 12.9 4.3 3.1 1 1 1 3 3 3 0 Bacteriophage Mu Gam like protein DUF3583 PF12126.8 ORF92171 - 0.33 10.3 15.2 0.54 9.7 14.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3583) Baculo_PEP_C PF04513.12 ORF92171 - 0.34 10.9 17.4 2.2 8.3 2.4 3.4 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus HMMR_N PF15905.5 ORF92171 - 0.35 10.3 24.5 1.3 8.4 22.7 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal HisKA_3 PF07730.13 ORF92171 - 0.37 11.3 9.3 22 5.6 0.1 3.6 3 1 0 3 3 3 0 Histidine kinase Cep57_CLD_2 PF14197.6 ORF92171 - 0.38 10.9 15.5 2.4 8.3 4.9 3.2 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 TACC_C PF05010.14 ORF92171 - 0.43 10.3 23.9 3.1 7.5 10.5 2.5 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal WXG100 PF06013.12 ORF92171 - 0.54 10.5 21.1 0.34 11.2 1.6 4.5 2 2 2 4 4 4 0 Proteins of 100 residues with WXG Rho_Binding PF08912.11 ORF92171 - 0.54 11.1 23.3 1 10.2 7.3 3.7 2 1 2 4 4 3 0 Rho Binding Tup_N PF08581.10 ORF92171 - 0.56 10.6 25.3 1.3 9.4 3.0 3.7 1 1 2 4 4 4 0 Tup N-terminal Filament PF00038.21 ORF92171 - 0.72 9.4 24.9 0.4 10.2 11.7 2.3 1 1 1 2 2 2 0 Intermediate filament protein DUF5082 PF16888.5 ORF92171 - 0.72 10.1 19.3 0.91 9.8 1.7 3.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Mod_r PF07200.13 ORF92171 - 0.73 9.9 24.4 24 5.0 15.5 2.5 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein MetOD2 PF18548.1 ORF92171 - 0.78 9.9 6.0 1.9 8.6 1.4 2.8 2 1 0 2 2 2 0 Metanogen output domain 2 PIN_8 PF18476.1 ORF92171 - 0.97 9.2 16.7 1 9.1 13.2 2.0 1 1 1 2 2 2 0 PIN like domain DUF4618 PF15397.6 ORF92171 - 1 8.7 22.8 3.5 7.0 1.6 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4618) HIP1_clath_bdg PF16515.5 ORF92171 - 1 10.0 27.0 0.57 10.8 15.0 2.7 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF2340 PF10209.9 ORF92171 - 1.1 9.8 7.0 0.62 10.5 4.5 1.9 2 1 0 2 2 1 0 Uncharacterized conserved protein (DUF2340) DUF883 PF05957.13 ORF92171 - 1.4 9.6 11.8 3.4 8.3 0.7 3.2 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) YtxH PF12732.7 ORF92171 - 2.2 8.9 5.0 73 4.0 5.0 3.0 1 1 0 1 1 1 0 YtxH-like protein CSN5_C PF18323.1 ORF92171 - 2.4 9.2 9.8 29 5.7 9.7 2.6 1 1 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain APG6_N PF17675.1 ORF92171 - 2.5 8.6 24.8 27 5.3 15.0 2.3 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF1664 PF07889.12 ORF92171 - 3.4 7.7 19.0 3.9 7.5 2.1 3.4 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Bap31_Bap29_C PF18035.1 ORF92171 - 3.7 7.6 8.5 39 4.4 3.9 3.4 2 1 1 3 3 3 0 Bap31/Bap29 cytoplasmic coiled-coil domain TolA_bind_tri PF16331.5 ORF92171 - 3.8 7.6 25.8 0.24 11.5 7.4 3.9 1 1 3 4 4 4 0 TolA binding protein trimerisation PI_PP_I PF18363.1 ORF92171 - 4.4 7.5 10.0 0.56 10.4 2.6 2.7 2 2 1 3 3 3 0 Phosphoinositide phosphatase insertion domain DASH_Dam1 PF08653.10 ORF92171 - 4.5 7.1 5.6 16 5.4 0.1 3.6 3 1 0 3 3 3 0 DASH complex subunit Dam1 NPV_P10 PF05531.12 ORF92171 - 4.7 7.8 14.9 33 5.1 0.1 3.9 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein ApoO PF09769.9 ORF92171 - 6.9 6.7 8.7 22 5.0 4.3 2.9 1 1 1 2 2 2 0 Apolipoprotein O Jnk-SapK_ap_N PF09744.9 ORF92171 - 8.7 6.5 24.5 27 5.0 20.1 2.8 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 Bax1-I PF01027.20 ORF90417 - 3e-37 128.5 28.9 3.5e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF90417 - 1.8 9.3 17.3 2.6 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF90417 - 2.8 8.0 8.1 7 6.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) Lip_A_acyltrans PF03279.13 ORF86134 - 2e-118 394.9 0.3 2.2e-118 394.7 0.3 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase ESSS PF10183.9 ORF86134 - 0.059 13.6 0.2 0.23 11.7 0.1 2.0 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) DUF2475 PF10629.9 ORF84992 - 4.7e-06 26.7 3.5 0.025 14.8 0.0 4.0 4 0 0 4 4 4 2 Protein of unknown function (DUF2475) FTCD_N PF07837.12 ORF84992 - 0.15 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Formiminotransferase domain, N-terminal subdomain PP2C PF00481.21 ORF80891 - 7.5e-45 153.6 0.4 8.5e-45 153.4 0.4 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF80891 - 2.1e-11 43.9 0.1 3.9e-11 43.0 0.1 1.4 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF80891 - 0.0077 16.2 0.6 1.6 8.6 0.1 2.2 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) Peptidase_S9 PF00326.21 ORF80891 - 0.12 11.8 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 Prolyl oligopeptidase family DUF5505 PF17610.2 ORF80891 - 0.19 11.7 0.1 0.33 10.9 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5505) DUF3139 PF11337.8 ORF79167 - 0.015 16.0 0.2 0.041 14.5 0.2 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) Tmemb_9 PF05434.11 ORF79167 - 0.015 15.2 0.1 0.033 14.1 0.1 1.5 1 0 0 1 1 1 0 TMEM9 DUF4051 PF13260.6 ORF79167 - 0.035 13.8 2.1 0.085 12.6 2.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4051) DUF4834 PF16118.5 ORF79167 - 0.048 14.6 0.7 0.14 13.1 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) DUF818 PF05677.12 ORF79167 - 0.063 12.2 0.0 0.11 11.5 0.0 1.3 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) EphA2_TM PF14575.6 ORF79167 - 0.12 13.2 0.8 0.24 12.3 0.1 1.8 2 1 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Ac76 PF05814.11 ORF79167 - 0.13 12.2 1.1 0.32 11.0 1.1 1.6 1 0 0 1 1 1 0 Orf76 (Ac76) Podoplanin PF05808.11 ORF79167 - 2.5 8.2 4.8 1.5 8.9 1.2 2.1 1 1 1 2 2 2 0 Podoplanin PARP PF00644.20 ORF78429 - 7.4e-10 38.7 0.0 1.1e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Pkinase PF00069.25 ORF78266 - 7.4e-63 212.4 0.0 8.7e-63 212.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78266 - 6.1e-23 81.4 0.0 1.1e-22 80.6 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF78266 - 2.3e-08 34.3 0.0 2.7e-07 30.8 0.1 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF78266 - 0.0062 16.1 0.5 0.015 14.9 0.5 1.6 1 1 1 2 2 2 1 RIO1 family Kdo PF06293.14 ORF78266 - 0.0094 15.3 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF78266 - 0.01 14.7 0.1 0.064 12.0 0.0 1.9 2 0 0 2 2 2 0 Fungal protein kinase Choline_kinase PF01633.20 ORF78266 - 0.088 12.4 0.1 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 Choline/ethanolamine kinase MoeA_N PF03453.17 ORF78266 - 0.23 11.2 0.0 0.38 10.5 0.0 1.2 1 0 0 1 1 1 0 MoeA N-terminal region (domain I and II) Chorein_N PF12624.7 ORF7098 - 9.4e-06 25.7 0.0 1.3e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 N-terminal region of Chorein or VPS13 Methyltransf_24 PF13578.6 ORF60513 - 6.7e-13 49.6 0.0 1.1e-12 48.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RRM_1 PF00076.22 ORF59303 - 0.0049 16.7 0.1 0.026 14.4 0.1 2.0 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF59303 - 0.028 14.5 0.0 0.048 13.8 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif Ureide_permease PF07168.11 ORF59240 - 5.2e-10 38.6 5.8 1e-06 27.8 0.1 2.1 2 0 0 2 2 2 2 Ureide permease Sugar_transport PF06800.12 ORF59240 - 0.0013 18.1 3.1 0.037 13.3 0.2 2.9 3 0 0 3 3 3 1 Sugar transport protein TMEM144 PF07857.12 ORF59240 - 0.03 13.3 0.3 0.03 13.3 0.3 2.0 2 0 0 2 2 2 0 Transmembrane family, TMEM144 of transporters COX1 PF00115.20 ORF59240 - 1.4 7.7 9.8 0.17 10.7 0.6 2.5 3 0 0 3 3 3 0 Cytochrome C and Quinol oxidase polypeptide I LAT PF15234.6 ORF59089 - 0.4 10.4 5.8 0.2 11.4 3.5 1.6 2 0 0 2 2 2 0 Linker for activation of T-cells Aldo_ket_red PF00248.21 ORF54259 - 2.5e-40 138.5 0.0 2.8e-38 131.8 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family SAC3 PF12209.8 ORF52173 - 0.015 15.5 0.5 4.1 7.7 0.0 3.2 2 1 1 3 3 3 0 Leucine permease transcriptional regulator helical domain Bax1-I PF01027.20 ORF51302 - 3e-37 128.5 28.9 3.5e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF51302 - 1.8 9.3 17.3 2.6 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF51302 - 2.8 8.0 8.1 7 6.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) Phasin_2 PF09361.10 ORF44567 - 0.15 12.3 15.5 0.24 11.7 15.5 1.3 1 0 0 1 1 1 0 Phasin protein DUF3168 PF11367.8 ORF44567 - 0.5 10.6 11.4 0.083 13.1 6.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3168) PAT1 PF09770.9 ORF44567 - 1.1 7.5 6.6 1.3 7.2 6.6 1.1 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Uso1_p115_C PF04871.13 ORF44567 - 1.4 9.3 9.7 2.2 8.6 9.7 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region HisKA_3 PF07730.13 ORF44567 - 4 8.0 12.1 0.4 11.2 6.6 2.0 1 1 1 2 2 2 0 Histidine kinase HECT PF00632.25 ORF43713 - 1.3e-09 37.9 0.0 1.8e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Peptidase_C1 PF00112.23 ORF42350 - 9.5e-55 186.0 2.2 1.3e-54 185.6 2.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF42350 - 8.3e-12 45.4 0.1 1.4e-11 44.7 0.1 1.4 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF42350 - 0.0014 17.5 0.4 0.41 9.4 0.1 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Cation_ATPase_C PF00689.21 ORF38068 - 4.3e-45 153.6 0.1 5.6e-45 153.3 0.1 1.1 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus OppC_N PF12911.7 ORF38068 - 0.043 13.8 1.6 14 5.8 0.8 2.7 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C 2OG-FeII_Oxy_3 PF13640.6 ORF36904 - 1.6e-08 35.3 0.0 2.5e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF36904 - 0.0094 16.4 0.0 0.016 15.7 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Ldt_C PF17969.1 ORF32907 - 7.1e-24 84.3 0.2 1.5e-23 83.3 0.2 1.6 1 0 0 1 1 1 1 L,D-transpeptidase C-terminal domain YkuD PF03734.14 ORF32907 - 1.9e-17 64.0 0.0 3.4e-17 63.2 0.0 1.4 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain Ion_trans PF00520.31 ORF31399 - 7.6e-09 35.2 15.6 1e-08 34.8 15.6 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF31399 - 0.0016 18.2 1.0 0.011 15.6 0.0 2.6 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF31399 - 0.016 14.7 0.5 0.048 13.2 0.1 2.2 2 0 0 2 2 2 0 EF hand EF-hand_7 PF13499.6 ORF31399 - 0.16 12.5 0.0 1.7 9.1 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain pair OAD_gamma PF04277.13 ORF31399 - 1.5 9.4 7.9 1.8 9.2 0.2 2.5 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Metallophos PF00149.28 ORF31357 - 4.4e-19 69.8 0.0 6.1e-19 69.3 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Bax1-I PF01027.20 ORF297 - 3e-37 128.5 28.9 3.5e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF297 - 1.8 9.3 17.3 2.6 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF297 - 2.8 8.0 8.1 7 6.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) Dynein_heavy PF03028.15 ORF28736 - 1e-05 25.6 0.1 1.7e-05 24.9 0.1 1.3 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain DUF3258 PF11646.8 ORF28736 - 0.0055 16.8 0.1 0.017 15.3 0.1 1.9 1 0 0 1 1 1 1 Protein of unknown function DUF3258 YL1 PF05764.13 ORF22318 - 0.097 12.8 8.2 0.13 12.3 8.2 1.1 1 0 0 1 1 1 0 YL1 nuclear protein DNA_pol_phi PF04931.13 ORF22318 - 0.64 8.0 6.7 0.79 7.8 6.7 1.0 1 0 0 1 1 1 0 DNA polymerase phi CCDC106 PF15794.5 ORF22318 - 4.1 7.0 4.7 6 6.5 4.7 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Staphostatin_B PF09023.10 ORF22096 - 0.034 14.2 2.3 0.052 13.6 0.4 2.0 2 0 0 2 2 2 0 Staphostatin B RCC1_2 PF13540.6 ORF19985 - 1.5e-13 50.2 16.1 0.12 12.2 0.2 6.4 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat FtsQ PF03799.15 ORF19985 - 2.2e-06 28.5 0.6 1.5 9.6 0.1 4.8 1 1 5 6 6 6 1 Cell division protein FtsQ DUF3502 PF12010.8 ORF19985 - 5.4e-05 23.8 3.3 16 6.1 0.0 4.8 1 1 4 5 5 5 0 Domain of unknown function (DUF3502) XRCC1_N PF01834.16 ORF19985 - 0.0016 18.5 0.4 15 5.6 0.2 4.6 1 1 5 6 6 6 0 XRCC1 N terminal domain IR1-M PF12185.8 ORF19985 - 0.0044 16.9 0.3 37 4.3 0.0 3.7 4 0 0 4 4 4 0 Nup358/RanBP2 E3 ligase domain Glyco_hydro_88 PF07470.13 ORF19985 - 0.031 13.3 4.6 10 5.1 0.2 4.0 4 1 0 4 4 4 0 Glycosyl Hydrolase Family 88 Methyltransf_29 PF03141.16 ORF19985 - 0.033 12.8 0.8 8 4.9 0.0 3.6 3 1 0 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase KASH_CCD PF14662.6 ORF19985 - 0.05 13.4 0.1 0.32 10.8 0.0 2.3 3 0 0 3 3 3 0 Coiled-coil region of CCDC155 or KASH DNA_ligase_A_C PF04679.15 ORF19985 - 0.08 13.5 0.5 55 4.5 0.0 3.6 1 1 3 4 4 4 0 ATP dependent DNA ligase C terminal region Yuri_gagarin PF15934.5 ORF19985 - 0.13 12.1 0.2 5.7 6.7 0.3 2.3 2 0 0 2 2 2 0 Yuri gagarin DNA_pol3_tau_5 PF12170.8 ORF19985 - 0.13 12.3 1.0 28 4.7 0.0 4.0 4 1 0 5 5 5 0 DNA polymerase III tau subunit V interacting with alpha Glyco_hydro_46 PF01374.18 ORF19985 - 0.14 11.8 5.4 8.2 6.0 0.1 3.7 1 1 3 4 4 4 0 Glycosyl hydrolase family 46 AFP_2 PF18815.1 ORF19985 - 2.6 8.3 9.3 21 5.5 0.1 4.2 3 1 2 5 5 4 0 Bacterial antifreeze protein repeat PKD PF00801.20 ORF19985 - 7.9 6.4 11.2 13 5.7 0.6 4.9 5 1 1 6 6 6 0 PKD domain PB1 PF00564.24 ORF17882 - 2.3e-09 37.1 0.4 4.7e-09 36.1 0.4 1.6 1 0 0 1 1 1 1 PB1 domain PAS_9 PF13426.7 ORF17882 - 0.02 15.2 1.3 0.044 14.0 1.3 1.8 1 1 0 1 1 1 0 PAS domain Caudo_bapla_RBP PF08931.10 ORF17882 - 0.048 13.1 0.1 0.065 12.7 0.1 1.1 1 0 0 1 1 1 0 Receptor-binding protein of phage tail base-plate Siphoviridae, head DUF3764 PF12594.8 ORF17882 - 0.11 12.6 1.6 1.8 8.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3764) Dala_Dala_lig_C PF07478.13 ORF1557 - 2.6e-72 242.6 0.0 3.3e-72 242.3 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 ORF1557 - 1.2e-19 70.7 0.4 3.6e-18 65.9 0.4 2.3 1 1 0 1 1 1 1 D-ala D-ala ligase N-terminus CPSase_L_D2 PF02786.17 ORF1557 - 1.3e-07 31.3 0.0 7.1e-07 28.9 0.0 1.9 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.6 ORF1557 - 5.9e-07 29.2 0.0 6.2e-06 25.9 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 ORF1557 - 0.00044 19.9 0.0 0.0011 18.6 0.0 1.5 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.6 ORF1557 - 0.0096 15.2 0.0 0.015 14.5 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp TTL PF03133.15 ORF1557 - 0.023 13.8 0.0 0.039 13.1 0.0 1.3 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family ATPgrasp_ST PF14397.6 ORF1557 - 0.026 13.8 0.0 0.048 12.9 0.0 1.3 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp LigA PF07746.11 ORF1557 - 0.037 14.2 0.1 21 5.3 0.0 3.1 2 1 0 2 2 2 0 Aromatic-ring-opening dioxygenase LigAB, LigA subunit GARS_A PF01071.19 ORF1557 - 0.049 13.4 0.0 0.065 13.0 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RimK PF08443.11 ORF1557 - 0.056 13.0 0.0 0.5 9.9 0.0 2.0 1 1 0 1 1 1 0 RimK-like ATP-grasp domain DUF155 PF02582.14 ORF13809 - 8.2e-22 78.1 0.0 1e-21 77.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YagE family COG1723 CTNNBL PF08216.11 ORF13442 - 0.057 13.6 2.1 0.17 12.1 0.2 2.4 2 1 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear NIF PF03031.18 ORF12783 - 5.2e-20 71.8 0.0 6.4e-20 71.5 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase HAD_SAK_2 PF18143.1 ORF12783 - 2.1e-09 37.8 0.1 1.4e-07 31.9 0.0 2.4 2 0 0 2 2 2 1 HAD domain in Swiss Army Knife RNA repair proteins Paramyxo_P_V_N PF13825.6 ORF12783 - 0.29 10.5 0.0 0.42 10.0 0.0 1.1 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus RRM_1 PF00076.22 ORF12324 - 0.0049 16.7 0.1 0.026 14.4 0.1 2.0 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF12324 - 0.028 14.5 0.0 0.048 13.8 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif RFC1 PF08519.12 ORF108457 - 6.9e-15 55.6 0.0 1.1e-14 54.9 0.0 1.3 1 0 0 1 1 1 1 Replication factor RFC1 C terminal domain DUF3676 PF12429.8 ORF108457 - 0.067 13.0 2.4 6 6.6 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3676) Bax1-I PF01027.20 ORF102137 - 3e-37 128.5 28.9 3.5e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF102137 - 1.8 9.3 17.3 2.6 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF102137 - 2.8 8.0 8.1 7 6.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) Ribosomal_L16 PF00252.18 ORF9954 - 2.1e-32 111.9 0.0 2.9e-32 111.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e ASFV_J13L PF05568.11 ORF9954 - 4 7.1 9.7 6.3 6.5 9.7 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Glyco_hydro_31 PF01055.26 ORF99206 - 3.5e-70 237.4 6.3 3.9e-70 237.2 6.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 His_Phos_1 PF00300.22 ORF97940 - 6.7e-14 52.0 0.7 4e-11 43.0 0.7 2.3 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) P2X_receptor PF00864.19 ORF95050 - 6.6e-38 130.7 0.5 8.5e-38 130.4 0.5 1.2 1 0 0 1 1 1 1 ATP P2X receptor Nodulin_late PF07127.11 ORF95050 - 0.057 13.8 2.9 0.11 12.8 2.9 1.5 1 0 0 1 1 1 0 Late nodulin protein Glyco_hydro_31 PF01055.26 ORF94373 - 3.5e-70 237.4 6.3 3.9e-70 237.2 6.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 S1-P1_nuclease PF02265.16 ORF94113 - 5e-49 167.4 0.1 5.7e-49 167.2 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF94113 - 0.02 13.5 1.5 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF94113 - 0.025 15.0 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) PhyH PF05721.13 ORF93105 - 2e-08 34.8 0.2 3.4e-07 30.7 0.0 2.1 2 0 0 2 2 2 1 Phytanoyl-CoA dioxygenase (PhyH) S1-P1_nuclease PF02265.16 ORF91080 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF91080 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF91080 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) S1-P1_nuclease PF02265.16 ORF8907 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF8907 - 0.0092 14.7 1.4 0.13 10.9 0.6 2.0 2 0 0 2 2 2 2 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF8907 - 0.025 15.0 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) Ank_2 PF12796.7 ORF86768 - 1.4e-52 176.2 0.6 2.2e-13 50.6 0.0 5.1 2 1 3 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF86768 - 2.6e-43 145.9 1.5 1.1e-08 35.4 0.0 7.9 3 3 6 9 9 9 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF86768 - 2e-37 122.9 1.2 0.00084 19.6 0.0 9.1 9 0 0 9 9 9 8 Ankyrin repeat Ank PF00023.30 ORF86768 - 9.9e-37 123.8 10.1 5.8e-05 23.4 0.0 9.1 9 0 0 9 9 9 8 Ankyrin repeat Ank_5 PF13857.6 ORF86768 - 2.3e-36 123.4 4.1 6.5e-06 26.3 0.0 7.3 4 2 3 7 7 7 7 Ankyrin repeats (many copies) DUF3107 PF11305.8 ORF86768 - 0.088 13.1 0.0 1.1 9.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3107) MycE_N PF17843.1 ORF86768 - 1.7 9.1 5.2 9.6 6.7 0.3 3.9 3 2 2 5 5 5 0 MycE methyltransferase N-terminal S1-P1_nuclease PF02265.16 ORF83906 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF83906 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF83906 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) S1-P1_nuclease PF02265.16 ORF82342 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF82342 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF82342 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) Glyco_hydro_31 PF01055.26 ORF8117 - 3.5e-70 237.4 6.3 3.9e-70 237.2 6.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 PRKG1_interact PF15898.5 ORF78435 - 5.3 8.0 31.8 0.053 14.4 6.0 3.5 2 1 2 4 4 4 0 cGMP-dependent protein kinase interacting domain DUF1664 PF07889.12 ORF78435 - 7.7 6.6 11.6 19 5.3 1.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 ORF78435 - 8.3 6.6 15.5 0.42 10.8 2.2 3.0 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family S1-P1_nuclease PF02265.16 ORF76142 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF76142 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF76142 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) VWD PF00094.25 ORF75199 - 0.0023 18.2 0.1 0.004 17.4 0.1 1.6 1 1 0 1 1 1 1 von Willebrand factor type D domain Phage_TAC_14 PF16462.5 ORF75199 - 0.19 12.0 0.2 0.46 10.7 0.1 1.7 2 0 0 2 2 2 0 Phage tail assembly chaperone protein, TAC Shisa PF13908.6 ORF71822 - 0.021 15.1 0.1 4.7 7.4 0.0 2.3 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator Herpes_LMP1 PF05297.11 ORF71822 - 0.15 11.3 7.8 12 5.0 0.0 2.1 2 0 0 2 2 2 0 Herpesvirus latent membrane protein 1 (LMP1) DUF2207 PF09972.9 ORF71822 - 1.4 7.5 7.4 1.9 7.2 0.0 2.4 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) AP_endonuc_2 PF01261.24 ORF66786 - 1e-33 116.6 0.0 1.4e-33 116.2 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Peptidase_A22B PF04258.13 ORF65906 - 8e-67 225.7 21.9 9.9e-67 225.4 21.9 1.0 1 0 0 1 1 1 1 Signal peptide peptidase SPP PF06550.11 ORF65906 - 0.0021 17.6 9.2 0.0021 17.6 9.2 2.9 3 1 0 3 3 3 1 Signal-peptide peptidase, presenilin aspartyl protease DUF2768 PF10966.8 ORF65906 - 0.081 13.4 0.4 0.081 13.4 0.4 4.3 4 1 1 5 5 5 0 Protein of unknown function (DUF2768) DUF1664 PF07889.12 ORF65906 - 0.088 12.8 0.6 0.25 11.4 0.6 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) CRAL_TRIO PF00650.20 ORF64960 - 5.6e-30 104.2 0.2 8.3e-30 103.6 0.2 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF64960 - 0.038 14.1 0.0 0.071 13.3 0.0 1.5 1 1 0 1 1 1 0 Divergent CRAL/TRIO domain Metallophos PF00149.28 ORF64682 - 2e-36 126.4 0.1 3.3e-36 125.7 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Glyco_hydro_31 PF01055.26 ORF63631 - 3.5e-70 237.4 6.3 3.9e-70 237.2 6.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 TPR_2 PF07719.17 ORF62466 - 9.4e-16 56.6 0.6 4.8e-05 23.1 0.0 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF62466 - 4e-15 54.9 0.2 9.7e-05 22.0 0.3 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF62466 - 4.3e-10 38.9 0.2 0.0067 16.4 0.0 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF62466 - 3.6e-09 36.1 0.6 0.0062 16.7 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF62466 - 3.8e-07 30.3 0.5 0.0015 18.8 0.0 3.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF62466 - 6e-07 29.8 0.9 0.11 13.4 0.0 3.7 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF62466 - 1.7e-05 24.4 1.3 0.0043 16.7 0.0 3.7 2 1 2 4 4 4 1 TPR repeat TPR_10 PF13374.6 ORF62466 - 4.8e-05 23.1 0.7 0.068 13.1 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF62466 - 0.00064 20.3 0.8 0.16 12.6 0.1 2.9 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF62466 - 0.00068 19.8 0.2 0.083 13.3 0.1 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF62466 - 0.0018 18.8 0.1 10 7.0 0.0 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat MIT PF04212.18 ORF62466 - 0.0032 17.5 0.0 17 5.5 0.0 3.3 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain ANAPC5 PF12862.7 ORF62466 - 0.01 15.9 0.1 0.027 14.5 0.1 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 5 TPR_19 PF14559.6 ORF62466 - 0.016 15.7 0.0 3.4 8.2 0.0 2.8 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF62466 - 0.018 15.2 1.3 0.12 12.5 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_15 PF13429.6 ORF62466 - 0.019 14.2 0.1 0.03 13.5 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF62466 - 0.026 13.9 0.4 0.04 13.3 0.4 1.3 1 0 0 1 1 1 0 MalT-like TPR region Ion_trans PF00520.31 ORF60896 - 2.2e-09 36.9 9.0 4.2e-09 36.0 9.0 1.5 1 0 0 1 1 1 1 Ion transport protein S1-P1_nuclease PF02265.16 ORF54672 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF54672 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF54672 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) SepSecS PF05889.13 ORF52731 - 3.4e-67 226.8 0.0 4.1e-67 226.6 0.0 1.1 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Beta_elim_lyase PF01212.21 ORF52731 - 0.0014 17.9 0.0 0.0017 17.7 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aldo_ket_red PF00248.21 ORF52147 - 3.1e-52 177.6 0.0 7.9e-52 176.3 0.0 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family AA_kinase PF00696.28 ORF49886 - 6.1e-25 88.2 0.0 8.6e-25 87.7 0.0 1.2 1 0 0 1 1 1 1 Amino acid kinase family Pkinase PF00069.25 ORF49211 - 1.5e-13 50.7 0.0 2.5e-13 50.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Ub-Mut7C PF14451.6 ORF49211 - 0.11 12.3 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Mut7-C ubiquitin PAP2_C PF14360.6 ORF47443 - 3.6e-07 30.6 3.3 3.6e-07 30.6 3.3 3.4 3 1 1 4 4 4 1 PAP2 superfamily C-terminal DUF2207 PF09972.9 ORF47443 - 0.067 11.9 0.3 0.11 11.2 0.3 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PAP2_3 PF14378.6 ORF47443 - 0.083 12.6 20.1 0.38 10.4 14.7 3.0 1 1 1 2 2 2 0 PAP2 superfamily Glyco_hydro_31 PF01055.26 ORF46426 - 3.5e-70 237.4 6.3 3.9e-70 237.2 6.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Methyltransf_23 PF13489.6 ORF43966 - 0.0054 16.6 0.0 0.0095 15.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF43966 - 0.074 13.7 0.0 0.74 10.5 0.0 2.6 3 1 0 3 3 3 0 Methyltransferase domain Methyltransf_25 PF13649.6 ORF43966 - 0.076 13.7 0.7 0.24 12.1 0.0 2.2 3 0 0 3 3 3 0 Methyltransferase domain TehB PF03848.14 ORF43966 - 0.12 11.8 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB AA_kinase PF00696.28 ORF39431 - 6.1e-25 88.2 0.0 8.6e-25 87.7 0.0 1.2 1 0 0 1 1 1 1 Amino acid kinase family MORN PF02493.20 ORF3940 - 2.2e-58 190.8 70.6 3e-08 33.1 3.9 10.9 10 1 0 10 10 10 10 MORN repeat DUF2491 PF10679.9 ORF3940 - 1.8 7.7 4.6 0.73 9.0 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2491) HhH-GPD PF00730.25 ORF39104 - 9.1e-18 64.7 0.0 1.3e-17 64.2 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 ORF39104 - 1.8e-07 30.7 0.0 5.1e-07 29.2 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 ORF39104 - 0.028 15.0 0.0 0.15 12.7 0.0 2.2 2 0 0 2 2 2 0 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.9 ORF39104 - 0.061 13.7 8.7 0.22 11.9 8.7 2.0 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III Methyltransf_3 PF01596.17 ORF37851 - 5.5e-10 38.8 0.0 8e-10 38.2 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF37851 - 4.9e-06 27.5 0.1 8.5e-06 26.7 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 ORF37851 - 0.069 12.7 0.1 0.1 12.1 0.1 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_23 PF13489.6 ORF37851 - 0.08 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Citrate_bind PF16114.5 ORF37851 - 0.14 11.7 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 ATP citrate lyase citrate-binding HEAT PF02985.22 ORF35644 - 0.035 14.4 0.2 0.53 10.7 0.0 3.2 3 0 0 3 3 3 0 HEAT repeat TIP120 PF08623.10 ORF35644 - 0.037 13.8 0.2 1.3 8.7 0.0 2.6 1 1 1 2 2 2 0 TATA-binding protein interacting (TIP20) HEAT_EZ PF13513.6 ORF35644 - 0.075 13.6 0.0 3.1 8.4 0.0 3.1 4 0 0 4 4 4 0 HEAT-like repeat S1-P1_nuclease PF02265.16 ORF34949 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF34949 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF34949 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) zf-RING_2 PF13639.6 ORF28717 - 1.6e-07 31.5 2.7 3e-07 30.7 2.7 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF28717 - 1.4e-06 27.9 3.9 3.3e-06 26.7 3.9 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF28717 - 6.2e-05 22.9 5.2 0.00013 21.9 5.2 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF28717 - 0.00022 21.0 1.0 0.00051 19.8 1.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF28717 - 0.00032 20.6 2.0 0.00061 19.7 2.0 1.5 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF28717 - 0.00093 18.8 0.9 0.0015 18.1 0.9 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 ORF28717 - 0.0025 17.7 3.0 0.0061 16.4 3.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RICTOR_M PF14666.6 ORF28717 - 0.032 14.0 0.4 0.12 12.2 0.1 2.0 3 0 0 3 3 3 0 Rapamycin-insensitive companion of mTOR, middle domain zf-rbx1 PF12678.7 ORF28717 - 0.076 13.3 2.8 0.25 11.7 2.8 1.9 1 1 0 1 1 1 0 RING-H2 zinc finger domain PHD PF00628.29 ORF28717 - 0.079 12.9 1.8 0.22 11.4 1.8 1.8 1 0 0 1 1 1 0 PHD-finger PHD_4 PF16866.5 ORF28717 - 0.1 12.7 6.9 3.5 7.8 0.4 2.9 2 1 0 2 2 2 0 PHD-finger FANCL_C PF11793.8 ORF28717 - 0.12 12.6 0.9 0.36 11.0 0.9 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain Snapin_Pallidin PF14712.6 ORF27944 - 0.0044 17.4 0.3 3.4 8.2 0.1 2.4 1 1 1 2 2 2 2 Snapin/Pallidin DUF1664 PF07889.12 ORF27944 - 0.0069 16.4 0.3 0.014 15.4 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DivIC PF04977.15 ORF27944 - 0.021 14.6 0.1 0.038 13.7 0.1 1.4 1 0 0 1 1 1 0 Septum formation initiator CENP-F_leu_zip PF10473.9 ORF27944 - 0.025 14.6 0.1 0.044 13.8 0.1 1.3 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1515 PF07439.11 ORF27944 - 0.025 14.6 0.0 0.35 10.9 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) Fez1 PF06818.15 ORF27944 - 0.056 13.9 0.1 0.08 13.4 0.1 1.2 1 0 0 1 1 1 0 Fez1 Spc7 PF08317.11 ORF27944 - 0.12 11.3 0.1 0.16 10.8 0.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein COG2 PF06148.11 ORF27944 - 0.14 12.3 0.3 0.33 11.1 0.3 1.6 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 TPR_20 PF14561.6 ORF27694 - 0.062 13.6 0.4 0.19 12.0 0.4 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4148 PF13663.6 ORF27694 - 0.14 12.4 2.0 17 5.7 0.3 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) WES_acyltransf PF03007.16 ORF2697 - 4.5e-14 52.9 0.0 7.2e-14 52.2 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 ORF2697 - 0.029 13.1 0.1 0.041 12.6 0.1 1.2 1 0 0 1 1 1 0 Condensation domain CTP_transf_1 PF01148.20 ORF26889 - 3e-51 174.7 8.6 3.6e-51 174.5 8.6 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family 2-oxoacid_dh PF00198.23 ORF23552 - 1e-53 182.2 0.0 1.3e-53 181.9 0.0 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Metallophos PF00149.28 ORF22468 - 3.1e-33 116.0 0.2 4.3e-33 115.6 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF2407_C PF13373.6 ORF21258 - 0.093 12.9 0.2 0.45 10.7 0.0 2.0 2 0 0 2 2 2 0 DUF2407 C-terminal domain PAP2_C PF14360.6 ORF1591 - 3.6e-07 30.6 3.3 3.6e-07 30.6 3.3 3.4 3 1 1 4 4 4 1 PAP2 superfamily C-terminal DUF2207 PF09972.9 ORF1591 - 0.067 11.9 0.3 0.11 11.2 0.3 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PAP2_3 PF14378.6 ORF1591 - 0.083 12.6 20.1 0.38 10.4 14.7 3.0 1 1 1 2 2 2 0 PAP2 superfamily AMP-binding PF00501.28 ORF14212 - 3.1e-10 39.2 0.0 5.4e-10 38.4 0.0 1.3 2 0 0 2 2 2 1 AMP-binding enzyme DUF3688 PF12461.8 ORF13776 - 0.25 9.7 0.0 0.27 9.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3688) Peptidase_C1 PF00112.23 ORF13245 - 8.9e-65 218.8 4.4 1.1e-64 218.6 4.4 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF13245 - 0.001 18.0 0.3 0.14 10.9 0.1 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Propeptide_C1 PF08127.13 ORF13245 - 0.057 13.3 0.0 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 Peptidase family C1 propeptide Peptidase_C1 PF00112.23 ORF12923 - 8.9e-65 218.8 4.4 1.1e-64 218.6 4.4 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF12923 - 0.001 18.0 0.3 0.14 10.9 0.1 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Propeptide_C1 PF08127.13 ORF12923 - 0.057 13.3 0.0 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 Peptidase family C1 propeptide Hist_deacetyl PF00850.19 ORF11482 - 7.4e-21 74.9 0.0 9.8e-21 74.5 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain REV PF00424.18 ORF11482 - 0.13 12.3 0.4 0.25 11.4 0.4 1.4 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) YL1 PF05764.13 ORF103492 - 4 7.5 28.1 6.5 6.8 28.1 1.3 1 0 0 1 1 1 0 YL1 nuclear protein Cation_ATPase PF13246.6 ORF101900 - 1.8e-14 53.6 0.2 1.7e-12 47.3 0.0 2.3 2 0 0 2 2 2 2 Cation transport ATPase (P-type) Hydrolase PF00702.26 ORF101900 - 1.4e-08 35.3 0.0 2.3e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase LicD PF04991.13 ORF101207 - 2.2e-15 57.5 0.4 7.3e-10 39.4 0.1 2.1 2 0 0 2 2 2 2 LicD family FMO-like PF00743.19 ORF101063 - 1.6e-31 109.4 2.9 4.5e-31 107.9 1.6 2.2 1 1 1 2 2 2 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF101063 - 1.1e-09 38.0 0.1 8.1e-07 28.6 0.3 2.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF101063 - 6.2e-09 35.5 0.0 1.8e-07 30.6 0.0 2.0 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 ORF101063 - 5.2e-08 33.0 0.0 9.5e-08 32.2 0.0 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 ORF101063 - 7.2e-08 32.4 0.0 9e-05 22.2 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF101063 - 1.2e-06 28.0 0.0 3.5e-06 26.4 0.0 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 ORF101063 - 0.00017 21.0 0.0 0.013 14.8 0.0 2.1 1 1 0 2 2 2 1 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 ORF101063 - 0.0013 18.7 0.0 0.0041 17.1 0.0 1.8 2 0 0 2 2 2 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF101063 - 0.002 16.9 0.0 0.0029 16.4 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.17 ORF101063 - 0.0022 17.3 0.0 0.0085 15.4 0.0 1.8 2 0 0 2 2 2 1 Thi4 family Pyr_redox PF00070.27 ORF101063 - 0.0078 16.7 0.1 0.096 13.3 0.0 2.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF101063 - 0.015 14.4 0.0 0.022 13.9 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain FAD_binding_3 PF01494.19 ORF101063 - 0.15 11.2 0.0 0.51 9.5 0.0 1.7 2 0 0 2 2 2 0 FAD binding domain Tox-ODYAM1 PF15642.6 NODE_22390_length_910_cov_84.914286_g17308_i0reverse_frame_1 - 0.23 10.4 17.1 0.33 9.9 17.1 1.3 1 0 0 1 1 1 0 Toxin in Odyssella and Amoebophilus CAF-1_p150 PF11600.8 NODE_22390_length_910_cov_84.914286_g17308_i0reverse_frame_1 - 1.3 8.7 37.6 3.3 7.4 37.6 1.6 1 0 0 1 1 1 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal Jas PF16135.5 NODE_22379_length_910_cov_194.153143_g2101_i3reverse_frame_1 - 0.13 12.4 1.5 0.32 11.2 1.5 1.6 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling LptF_LptG PF03739.14 NODE_22289_length_913_cov_3.072893_g17222_i0reverse_frame_2 - 2.8e-40 138.3 0.6 3.4e-40 138.0 0.6 1.1 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG YtfJ_HI0045 PF09695.10 NODE_22289_length_913_cov_3.072893_g17222_i0reverse_frame_2 - 1e-06 28.5 0.0 1.8e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Bacterial protein of unknown function (YtfJ_HI0045) PIG-Y PF15159.6 NODE_22289_length_913_cov_3.072893_g17222_i0reverse_frame_2 - 7.2 7.6 5.9 70 4.4 6.0 2.2 1 1 1 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y Lipase_GDSL_3 PF14606.6 NODE_22287_length_913_cov_3.300683_g17221_i0reverse_frame_3 - 0.18 11.9 1.6 0.34 11.0 1.6 1.4 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family Wbp11 PF09429.10 NODE_22287_length_913_cov_3.300683_g17221_i0reverse_frame_3 - 2.1 8.8 6.2 12 6.4 1.9 2.6 1 1 0 2 2 2 0 WW domain binding protein 11 IL8 PF00048.20 NODE_22283_length_913_cov_43.773349_g17217_i0reverse_frame_2 - 0.0075 16.4 0.1 0.018 15.2 0.1 1.6 1 0 0 1 1 1 1 Small cytokines (intecrine/chemokine), interleukin-8 like MscS_porin PF12795.7 NODE_22240_length_914_cov_92.792947_g17179_i0forward_frame_3 - 0.0041 16.7 30.5 0.0041 16.7 30.5 2.6 3 1 0 3 3 3 1 Mechanosensitive ion channel porin domain Fez1 PF06818.15 NODE_22240_length_914_cov_92.792947_g17179_i0forward_frame_3 - 0.065 13.7 42.5 0.49 10.8 9.7 3.1 1 1 2 3 3 3 0 Fez1 TMF_DNA_bd PF12329.8 NODE_22240_length_914_cov_92.792947_g17179_i0forward_frame_3 - 0.51 10.4 57.3 0.035 14.1 25.2 4.3 2 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding Golgin_A5 PF09787.9 NODE_22240_length_914_cov_92.792947_g17179_i0forward_frame_3 - 5.4 6.4 44.1 0.29 10.6 24.7 3.0 1 1 2 3 3 3 0 Golgin subfamily A member 5 SelA PF03841.13 ORF98927 - 2e-140 468.0 0.0 2.3e-140 467.8 0.0 1.0 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.19 ORF98927 - 0.0071 15.3 0.2 0.017 14.1 0.2 1.5 1 1 0 1 1 1 1 Aminotransferase class-V zf-CCCH PF00642.24 ORF97169 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF97169 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF97169 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF97169 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger RNase_Zc3h12a PF11977.8 ORF97015 - 5e-07 29.6 0.0 6.5e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Zc3h12a-like Ribonuclease NYN domain NPR3 PF03666.13 ORF97015 - 0.059 12.2 0.0 0.078 11.8 0.0 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Porin_3 PF01459.22 ORF96842 - 2.4e-13 50.2 4.9 2.8e-13 49.9 4.9 1.1 1 0 0 1 1 1 1 Eukaryotic porin Met_10 PF02475.16 ORF95340 - 8.3e-25 87.7 0.0 1.3e-24 87.1 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein MTS PF05175.14 ORF95340 - 0.011 15.3 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain FmrO PF07091.11 ORF95340 - 0.12 11.9 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) zf-CCCH PF00642.24 ORF93990 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF93990 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF93990 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF93990 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger MFS_1 PF07690.16 ORF8982 - 0.042 12.8 36.3 0.8 8.6 36.3 2.1 1 1 0 1 1 1 0 Major Facilitator Superfamily UPF0182 PF03699.13 ORF8982 - 0.28 9.2 1.2 0.55 8.3 1.2 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0182) DUF4404 PF14357.6 ORF89576 - 0.027 15.1 1.0 0.064 13.9 1.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) Methyltransf_11 PF08241.12 ORF89219 - 7.4e-12 45.8 0.0 8.7e-11 42.3 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF89219 - 6.9e-11 41.9 0.2 2.5e-07 30.3 0.1 2.9 1 1 1 2 2 2 2 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 ORF89219 - 3.4e-10 40.5 0.0 4e-05 24.2 0.0 2.6 1 1 1 2 2 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 ORF89219 - 1.6e-07 31.3 0.0 2.2e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF89219 - 9.6e-05 22.2 0.1 0.0031 17.3 0.1 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF89219 - 0.00029 21.5 0.0 0.001 19.8 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 ORF89219 - 0.03 14.2 0.1 0.064 13.1 0.0 1.8 2 0 0 2 2 2 0 Hypothetical methyltransferase Methyltransf_16 PF10294.9 ORF89219 - 0.031 14.0 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase PCMT PF01135.19 ORF89219 - 0.18 11.5 0.0 0.49 10.1 0.0 1.7 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) zf-B_box PF00643.24 ORF89149 - 0.0078 16.4 3.8 0.015 15.5 3.8 1.4 1 0 0 1 1 1 1 B-box zinc finger CompInhib_SCIN PF11546.8 ORF89149 - 0.012 15.7 12.1 0.037 14.1 7.5 2.8 3 1 0 3 3 3 0 Staphylococcal complement inhibitor SCIN Pepsin-I3 PF06394.13 ORF89149 - 0.028 14.6 1.8 0.62 10.3 0.0 2.6 2 0 0 2 2 2 0 Pepsin inhibitor-3-like repeated domain DUF2433 PF10360.9 ORF89149 - 0.81 9.8 8.3 0.11 12.7 0.8 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2433) HALZ PF02183.18 ORF89149 - 3 8.1 12.5 0.14 12.4 1.6 3.9 3 2 2 5 5 5 0 Homeobox associated leucine zipper DUF4047 PF13256.6 ORF89149 - 3.6 7.8 17.8 0.85 9.8 11.5 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4047) GntP_permease PF02447.16 ORF87066 - 7.6e-97 324.8 24.7 8.4e-97 324.6 24.7 1.0 1 0 0 1 1 1 1 GntP family permease LRR_RI_capping PF18779.1 ORF86592 - 0.024 14.3 0.1 0.056 13.1 0.1 1.5 1 0 0 1 1 1 0 Capping Ribonuclease inhibitor Leucine Rich Repeat tRNA-synt_2e PF02091.15 ORF85329 - 0.0049 16.2 2.4 12 5.1 0.0 4.2 1 1 3 5 5 5 3 Glycyl-tRNA synthetase alpha subunit Urocanase_N PF17391.2 ORF85329 - 0.009 15.7 1.1 84 2.9 0.0 5.0 1 1 6 7 7 7 0 Urocanase N-terminal domain LupA PF18242.1 ORF85329 - 0.052 13.2 0.9 90 2.7 0.0 4.4 4 1 1 5 5 5 0 Legionella ubiquitin-specific protease A domain DUF1917 PF08939.10 ORF85329 - 1.3 8.9 3.0 40 4.0 0.1 3.1 2 1 2 4 4 4 0 Domain of unknown function (DUF1917) MORN PF02493.20 ORF84361 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF84361 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain DnaJ PF00226.31 ORF79675 - 1.1e-26 92.7 3.9 1.1e-26 92.7 3.9 2.4 2 0 0 2 2 2 1 DnaJ domain zf-C2HE PF16278.5 ORF77315 - 0.00021 21.7 1.0 0.00055 20.3 1.0 1.6 1 0 0 1 1 1 1 C2HE / C2H2 / C2HC zinc-binding finger LRR_6 PF13516.6 ORF76659 - 0.00048 20.0 6.0 23 5.4 0.1 6.1 5 0 0 5 5 5 3 Leucine Rich repeat Mito_carr PF00153.27 ORF73641 - 4.8e-68 225.1 3.8 2e-23 82.1 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Chloroa_b-bind PF00504.21 ORF73237 - 3.6e-45 154.4 1.0 6.1e-29 101.6 0.5 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein MORN PF02493.20 ORF72280 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF72280 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain CTP_transf_like PF01467.26 ORF72101 - 0.011 16.0 0.0 0.03 14.5 0.0 2.0 1 1 0 1 1 1 0 Cytidylyltransferase-like Sugar_tr PF00083.24 ORF7160 - 2.6e-21 76.0 9.3 3.2e-21 75.7 9.3 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter P2X_receptor PF00864.19 ORF66301 - 1.5e-20 73.6 5.6 1.5e-18 67.0 5.6 2.8 1 1 0 1 1 1 1 ATP P2X receptor Tup_N PF08581.10 ORF66243 - 2 8.8 16.2 0.24 11.8 6.7 2.5 2 1 1 3 3 3 0 Tup N-terminal DUF1451 PF07295.11 ORF66243 - 7.2 6.6 17.0 0.12 12.4 4.3 2.5 1 1 1 2 2 2 0 Zinc-ribbon containing domain Apolipoprotein PF01442.18 ORF66243 - 9 6.1 37.3 6.4 6.6 22.2 2.3 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain MORN PF02493.20 ORF6611 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF6611 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain MORN PF02493.20 ORF61402 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF61402 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain Porin_3 PF01459.22 ORF59984 - 2.4e-13 50.2 4.9 2.8e-13 49.9 4.9 1.1 1 0 0 1 1 1 1 Eukaryotic porin TRAPPC9-Trs120 PF08626.11 ORF59449 - 3.6 4.8 4.6 4.5 4.5 4.6 1.1 1 0 0 1 1 1 0 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit FAD_binding_6 PF00970.24 ORF59117 - 3e-11 43.5 0.0 5.2e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF59117 - 3.5e-09 37.3 0.0 1.1e-08 35.6 0.0 1.8 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain His_Phos_1 PF00300.22 ORF58515 - 2.1e-18 66.7 0.2 3.3e-18 66.1 0.2 1.3 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Chloroa_b-bind PF00504.21 ORF57102 - 3.6e-45 154.4 1.0 6.1e-29 101.6 0.5 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein Inositol_P PF00459.25 ORF55378 - 3.2e-17 63.0 0.0 3e-16 59.8 0.0 2.0 1 1 0 1 1 1 1 Inositol monophosphatase family LIM PF00412.22 ORF55378 - 0.086 13.1 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 LIM domain Porin_3 PF01459.22 ORF54185 - 2.4e-13 50.2 4.9 2.8e-13 49.9 4.9 1.1 1 0 0 1 1 1 1 Eukaryotic porin Helicase_C PF00271.31 ORF53417 - 7.4e-08 32.7 0.0 1.2e-07 32.1 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Aldo_ket_red PF00248.21 ORF53297 - 9.4e-49 166.2 0.2 1.6e-48 165.4 0.2 1.4 1 1 0 1 1 1 1 Aldo/keto reductase family BcrAD_BadFG PF01869.20 ORF53297 - 0.24 10.9 0.0 0.33 10.4 0.0 1.3 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family LysR_substrate PF03466.20 ORF53083 - 1.5e-44 151.8 0.0 2.3e-44 151.3 0.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF53083 - 8.3e-21 73.7 1.1 3.8e-20 71.6 1.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 ORF53083 - 0.054 13.1 0.0 0.33 10.5 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding RICTOR_N PF14664.6 ORF52667 - 4.3e-31 108.2 11.9 1.3e-29 103.3 11.9 2.0 1 1 0 1 1 1 1 Rapamycin-insensitive companion of mTOR, N-term Rhomboid PF01694.22 ORF5183 - 1.2e-20 74.1 18.5 1.2e-20 74.1 18.5 2.5 3 0 0 3 3 3 2 Rhomboid family MORN PF02493.20 ORF50970 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF50970 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain Pkinase PF00069.25 ORF49973 - 1.9e-66 224.1 0.0 2.2e-66 223.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49973 - 8e-29 100.7 0.0 1.1e-28 100.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF49973 - 3.5e-05 23.3 0.0 4.8e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF49973 - 8.9e-05 21.9 0.0 0.00013 21.3 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF49973 - 0.0019 17.0 0.0 0.0031 16.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF49973 - 0.0028 17.3 0.1 0.24 11.0 0.0 2.2 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF49973 - 0.01 14.8 0.0 0.013 14.4 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF49973 - 0.031 14.2 0.0 0.054 13.4 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family RNase_Zc3h12a PF11977.8 ORF47812 - 5e-07 29.6 0.0 6.5e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Zc3h12a-like Ribonuclease NYN domain NPR3 PF03666.13 ORF47812 - 0.059 12.2 0.0 0.078 11.8 0.0 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 MORN PF02493.20 ORF47650 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF47650 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain WD40 PF00400.32 ORF45186 - 2.5e-20 72.4 1.0 5.8e-08 33.3 0.0 3.3 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF45186 - 2.6e-08 34.0 0.0 0.0062 16.8 0.0 3.1 2 1 2 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF45186 - 8.5e-05 21.7 0.2 0.34 9.8 0.0 2.9 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein FAM76 PF16046.5 ORF45186 - 0.0034 16.8 0.0 0.0046 16.4 0.0 1.1 1 0 0 1 1 1 1 FAM76 protein Chloroa_b-bind PF00504.21 ORF44209 - 3.6e-45 154.4 1.0 6.1e-29 101.6 0.5 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein zf-RING_2 PF13639.6 ORF43129 - 6.2e-12 45.7 10.7 6.2e-12 45.7 10.7 2.1 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF43129 - 7.3e-07 28.8 1.8 7.3e-07 28.8 1.8 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF43129 - 7.4e-07 29.1 11.2 7.4e-07 29.1 11.2 1.8 2 0 0 2 2 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF43129 - 1.3e-06 28.1 12.2 1.3e-06 28.1 12.2 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF43129 - 2e-06 27.5 9.9 2e-06 27.5 9.9 1.7 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF43129 - 6.5e-06 26.3 11.8 6.5e-06 26.3 11.8 2.5 3 1 0 3 3 2 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF43129 - 1.7e-05 24.7 7.2 1.7e-05 24.7 7.2 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF43129 - 0.00051 19.8 9.8 0.00051 19.8 9.8 2.4 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF43129 - 0.0021 18.1 5.2 0.0055 16.7 5.2 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger mRNA_stabil PF13929.6 ORF43129 - 0.28 10.1 0.0 0.4 9.6 0.0 1.2 1 0 0 1 1 1 0 mRNA stabilisation zf-C3H2C3 PF17122.5 ORF43129 - 0.6 10.2 8.7 0.27 11.3 4.7 2.3 2 0 0 2 2 2 0 Zinc-finger FANCL_C PF11793.8 ORF43129 - 1.1 9.5 6.6 12 6.1 6.7 2.6 1 1 1 2 2 2 0 FANCL C-terminal domain zf-Nse PF11789.8 ORF43129 - 1.3 8.9 7.8 2.6 7.9 7.8 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_ribbon_17 PF17120.5 ORF43129 - 3.9 7.2 12.2 0.047 13.3 4.6 1.8 2 0 0 2 2 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF43129 - 10 6.4 13.7 43 4.4 13.7 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING IQ PF00612.27 ORF40985 - 0.019 14.7 1.3 0.048 13.5 1.3 1.7 1 0 0 1 1 1 0 IQ calmodulin-binding motif DUF4404 PF14357.6 ORF40563 - 0.027 15.1 1.0 0.064 13.9 1.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) AA_kinase PF00696.28 ORF37504 - 2.7e-33 115.6 0.0 4.6e-33 114.8 0.0 1.4 1 0 0 1 1 1 1 Amino acid kinase family ACT PF01842.25 ORF37504 - 7.5e-09 35.2 0.0 1.3e-06 28.0 0.0 2.6 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 ORF37504 - 6e-07 29.2 0.0 0.023 14.5 0.0 2.6 2 0 0 2 2 2 2 ACT domain Mito_carr PF00153.27 ORF3741 - 3.2e-68 225.7 3.2 2e-23 82.1 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein OB_NTP_bind PF07717.16 ORF36986 - 5e-15 55.6 0.1 8.9e-15 54.8 0.1 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 ORF36986 - 0.041 14.2 0.0 0.1 12.9 0.0 1.6 1 0 0 1 1 1 0 Helicase conserved C-terminal domain zf-CCCH PF00642.24 ORF36699 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF36699 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF36699 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF36699 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger Pkinase PF00069.25 ORF35457 - 1.9e-66 224.1 0.0 2.2e-66 223.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF35457 - 8e-29 100.7 0.0 1.1e-28 100.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF35457 - 3.5e-05 23.3 0.0 4.8e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF35457 - 8.9e-05 21.9 0.0 0.00013 21.3 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF35457 - 0.0019 17.0 0.0 0.0031 16.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF35457 - 0.0028 17.3 0.1 0.24 11.0 0.0 2.2 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF35457 - 0.01 14.8 0.0 0.013 14.4 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF35457 - 0.031 14.2 0.0 0.054 13.4 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family RRM_1 PF00076.22 ORF33069 - 1e-13 50.9 0.0 1.7e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF33069 - 5.3e-06 26.5 0.0 1.3e-05 25.2 0.0 1.6 1 1 0 1 1 1 1 RNA recognition motif RRM_5 PF13893.6 ORF33069 - 0.042 13.5 0.0 0.065 12.8 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) B12-binding PF02310.19 ORF33069 - 0.12 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 B12 binding domain TBCC PF07986.12 ORF33069 - 0.13 11.9 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Tubulin binding cofactor C MORN PF02493.20 ORF31971 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF31971 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain AAA PF00004.29 ORF29179 - 4.2e-42 143.7 0.0 7.2e-42 142.9 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF29179 - 5.5e-13 48.5 0.1 3.2e-12 46.0 0.1 2.4 1 1 0 1 1 1 1 AAA+ lid domain Vps4_C PF09336.10 ORF29179 - 3.2e-10 39.8 0.7 9.5e-10 38.3 0.1 2.1 3 0 0 3 3 2 1 Vps4 C terminal oligomerisation domain AAA_2 PF07724.14 ORF29179 - 4.9e-08 33.3 0.0 9.5e-08 32.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF29179 - 8.8e-06 25.5 0.0 1.7e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 ORF29179 - 0.0001 22.3 1.5 0.0013 18.7 0.7 2.9 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) ATPase PF06745.13 ORF29179 - 0.00011 21.7 0.6 0.24 10.7 0.1 2.3 1 1 1 2 2 2 2 KaiC AAA_22 PF13401.6 ORF29179 - 0.00012 22.4 0.4 0.00072 19.9 0.3 2.3 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF29179 - 0.00025 21.5 0.1 0.0015 19.0 0.1 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 ORF29179 - 0.00042 20.3 0.1 0.0019 18.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF29179 - 0.00064 19.5 0.0 0.0013 18.5 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_24 PF13479.6 ORF29179 - 0.00084 19.1 0.0 0.0015 18.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 ORF29179 - 0.0014 18.1 0.1 0.0028 17.0 0.1 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 ORF29179 - 0.0016 19.0 0.1 0.0051 17.4 0.1 2.0 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 ORF29179 - 0.0022 17.3 0.0 0.0035 16.6 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain RNA_helicase PF00910.22 ORF29179 - 0.0082 16.5 0.6 0.035 14.5 0.1 2.4 2 1 0 2 2 1 1 RNA helicase AAA_7 PF12775.7 ORF29179 - 0.0083 15.7 0.2 0.039 13.5 0.2 2.2 1 1 0 1 1 1 1 P-loop containing dynein motor region AAA_28 PF13521.6 ORF29179 - 0.01 16.1 0.0 0.02 15.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF29179 - 0.011 15.7 0.1 0.049 13.5 0.1 2.3 1 1 0 1 1 1 0 NACHT domain Sigma54_activat PF00158.26 ORF29179 - 0.015 15.0 0.1 0.21 11.3 0.0 2.5 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_33 PF13671.6 ORF29179 - 0.015 15.4 0.2 0.026 14.7 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF29179 - 0.018 14.6 0.5 0.05 13.2 0.2 1.9 1 1 1 2 2 2 0 AAA domain DUF815 PF05673.13 ORF29179 - 0.019 14.1 0.0 0.049 12.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TniB PF05621.11 ORF29179 - 0.044 13.2 0.1 1.8 7.9 0.0 2.7 2 1 1 3 3 3 0 Bacterial TniB protein AAA_11 PF13086.6 ORF29179 - 0.046 13.5 0.2 0.12 12.2 0.2 1.7 1 1 0 1 1 1 0 AAA domain Parvo_NS1 PF01057.17 ORF29179 - 0.049 12.7 0.0 0.079 12.0 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 PhoH PF02562.16 ORF29179 - 0.067 12.6 0.1 0.14 11.6 0.1 1.5 1 0 0 1 1 1 0 PhoH-like protein TsaE PF02367.17 ORF29179 - 0.069 13.1 0.1 0.22 11.5 0.1 1.8 1 1 1 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_3 PF07726.11 ORF29179 - 0.084 12.7 0.0 0.57 10.0 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 ORF29179 - 0.11 12.4 0.8 0.63 9.9 0.8 2.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_29 PF13555.6 ORF29179 - 0.12 12.2 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 ORF29179 - 0.14 11.9 0.0 0.33 10.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain Pkinase PF00069.25 ORF28571 - 1.9e-66 224.1 0.0 2.2e-66 223.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF28571 - 8e-29 100.7 0.0 1.1e-28 100.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF28571 - 3.5e-05 23.3 0.0 4.8e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF28571 - 8.9e-05 21.9 0.0 0.00013 21.3 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF28571 - 0.0019 17.0 0.0 0.0031 16.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF28571 - 0.0028 17.3 0.1 0.24 11.0 0.0 2.2 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF28571 - 0.01 14.8 0.0 0.013 14.4 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF28571 - 0.031 14.2 0.0 0.054 13.4 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family RICTOR_N PF14664.6 ORF28427 - 4.3e-31 108.2 11.9 1.3e-29 103.3 11.9 2.0 1 1 0 1 1 1 1 Rapamycin-insensitive companion of mTOR, N-term PP2C PF00481.21 ORF26443 - 3.5e-45 154.6 0.3 4e-45 154.5 0.3 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF26443 - 1.7e-11 44.2 0.1 2.9e-11 43.4 0.1 1.3 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF26443 - 0.002 18.1 0.6 0.43 10.5 0.1 2.2 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) Peptidase_S9 PF00326.21 ORF26443 - 0.13 11.8 0.0 0.24 10.9 0.0 1.4 1 0 0 1 1 1 0 Prolyl oligopeptidase family DUF5505 PF17610.2 ORF26443 - 0.18 11.8 0.1 0.33 10.9 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5505) FIVAR PF07554.13 ORF26443 - 1.8 9.4 6.7 1.8 9.4 0.6 2.3 2 0 0 2 2 2 0 FIVAR domain DUF4404 PF14357.6 ORF26255 - 0.027 15.1 1.0 0.064 13.9 1.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) DUF234 PF03008.14 ORF26081 - 0.13 12.7 6.0 0.3 11.6 0.1 3.1 2 1 0 2 2 2 0 Archaea bacterial proteins of unknown function Asp_Arg_Hydrox PF05118.15 ORF23984 - 5.4e-24 84.8 0.0 1.1e-23 83.9 0.0 1.5 2 0 0 2 2 2 1 Aspartyl/Asparaginyl beta-hydroxylase TTL PF03133.15 ORF23685 - 8.8e-11 41.5 0.0 1.3e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF23685 - 1.5e-05 24.4 0.0 2.6e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF23685 - 0.0071 15.6 0.0 0.011 15.0 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp RimK PF08443.11 ORF23685 - 0.059 13.0 0.0 0.088 12.4 0.0 1.2 1 0 0 1 1 1 0 RimK-like ATP-grasp domain MORN PF02493.20 ORF21729 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF21729 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain MORN PF02493.20 ORF17844 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF17844 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain DUF4404 PF14357.6 ORF17837 - 0.027 15.1 1.0 0.064 13.9 1.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) MORN PF02493.20 ORF14653 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF14653 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain TRAPPC9-Trs120 PF08626.11 ORF13963 - 3.6 4.8 4.6 4.5 4.5 4.6 1.1 1 0 0 1 1 1 0 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit Gamma_PGA_hydro PF05908.11 ORF13429 - 0.1 12.0 0.2 0.1 12.0 0.2 1.9 2 0 0 2 2 2 0 Poly-gamma-glutamate hydrolase MORN PF02493.20 ORF112418 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF112418 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain VCH_CASS14 PF18315.1 ORF109968 - 0.019 15.0 0.0 0.033 14.2 0.0 1.3 1 0 0 1 1 1 0 Integron cassette protein VCH_CASS1 chain Cep57_MT_bd PF06657.13 ORF109968 - 0.069 13.6 0.1 18 5.8 0.0 2.6 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 zf-CCCH PF00642.24 ORF108997 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF108997 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF108997 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF108997 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks50.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks50.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks50.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks50.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-CCCH PF00642.24 ORF107249 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF107249 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF107249 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF107249 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger IU_nuc_hydro PF01156.19 ORF106402 - 1.9e-81 274.0 0.1 2.2e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase Esterase_phd PF10503.9 ORF105710 - 3.3e-06 26.7 0.0 5.4e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Esterase PHB depolymerase Imm25 PF15564.6 ORF105710 - 0.064 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Immunity protein 25 Thioredoxin_3 PF13192.6 ORF105662 - 0.041 13.9 0.6 0.14 12.2 0.6 2.0 1 0 0 1 1 1 0 Thioredoxin domain MORN PF02493.20 ORF105192 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF105192 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain MORN PF02493.20 ORF105076 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF105076 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain Chloroa_b-bind PF00504.21 ORF101315 - 3.6e-45 154.4 1.0 6.1e-29 101.6 0.5 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein Kri1_C PF12936.7 ORF100256 - 6.2e-21 74.4 0.0 1.4e-20 73.3 0.0 1.5 1 0 0 1 1 1 1 KRI1-like family C-terminal ZZ PF00569.17 ORF100256 - 0.00017 21.3 6.0 0.00025 20.8 5.2 1.7 2 0 0 2 2 2 1 Zinc finger, ZZ type C1_2 PF03107.16 ORF100256 - 0.0017 18.6 4.4 0.0036 17.6 4.4 1.5 1 0 0 1 1 1 1 C1 domain FYVE PF01363.21 ORF100256 - 0.081 13.1 3.7 0.15 12.2 3.7 1.4 1 0 0 1 1 1 0 FYVE zinc finger FXMRP1_C_core PF12235.8 ORF100256 - 0.42 11.3 11.9 0.79 10.4 11.9 1.4 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal TRP PF06011.12 NODE_22450_length_908_cov_101.145475_g17358_i0forward_frame_1 - 1.2e-07 30.9 15.9 3.2e-07 29.4 15.8 1.6 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel LST1 PF05083.13 NODE_22450_length_908_cov_101.145475_g17358_i0forward_frame_1 - 0.021 15.1 0.1 2.1 8.7 0.0 2.5 2 0 0 2 2 2 0 LST-1 protein Shisa PF13908.6 NODE_22450_length_908_cov_101.145475_g17358_i0forward_frame_1 - 0.082 13.1 0.3 0.25 11.6 0.0 1.9 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator EphA2_TM PF14575.6 NODE_22450_length_908_cov_101.145475_g17358_i0forward_frame_1 - 0.78 10.7 6.4 6.8 7.6 0.1 3.6 3 1 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain MFS_1 PF07690.16 NODE_22424_length_909_cov_2.361556_g17335_i0reverse_frame_1 - 1.6e-29 102.9 33.9 1.8e-29 102.8 33.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_22424_length_909_cov_2.361556_g17335_i0reverse_frame_1 - 2.8e-27 95.7 21.9 3.5e-27 95.4 21.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Tim17 PF02466.19 NODE_22424_length_909_cov_2.361556_g17335_i0reverse_frame_1 - 1.8 9.0 11.1 0.2 12.0 3.1 2.9 3 0 0 3 3 3 0 Tim17/Tim22/Tim23/Pmp24 family PgaD PF13994.6 NODE_22418_length_909_cov_84.458810_g17329_i0forward_frame_1 - 0.025 14.7 1.8 0.083 13.0 1.8 1.9 1 0 0 1 1 1 0 PgaD-like protein XPG_I PF00867.18 NODE_22379_length_910_cov_194.153143_g2101_i3reverse_frame_2 - 2.7e-14 53.3 0.2 4.8e-14 52.5 0.2 1.4 1 0 0 1 1 1 1 XPG I-region XPG_I_2 PF12813.7 NODE_22379_length_910_cov_194.153143_g2101_i3reverse_frame_2 - 0.016 14.7 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 XPG domain containing Macro_2 PF14519.6 NODE_22379_length_910_cov_194.153143_g2101_i3reverse_frame_2 - 0.061 12.7 0.4 2 7.7 0.0 2.4 3 0 0 3 3 3 0 Macro-like domain MFS_1 PF07690.16 NODE_22358_length_911_cov_3.360731_g17280_i0forward_frame_2 - 3.4e-26 92.0 45.5 1.3e-20 73.7 21.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily PUCC PF03209.15 NODE_22358_length_911_cov_3.360731_g17280_i0forward_frame_2 - 0.00089 18.4 17.5 0.0051 15.9 17.4 1.9 1 1 0 1 1 1 1 PUCC protein MtrF PF09472.10 NODE_22358_length_911_cov_3.360731_g17280_i0forward_frame_2 - 0.049 13.0 0.2 0.049 13.0 0.2 2.4 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) DUF5391 PF17369.2 NODE_22358_length_911_cov_3.360731_g17280_i0forward_frame_2 - 0.37 10.8 13.6 0.74 9.8 1.4 3.1 3 0 0 3 3 3 0 Family of unknown function (DUF5391) ATG16 PF08614.11 NODE_22352_length_911_cov_116.038813_g17274_i0forward_frame_2 - 0.0029 17.9 8.3 0.0029 17.9 8.3 2.1 1 1 1 2 2 2 1 Autophagy protein 16 (ATG16) CCDC-167 PF15188.6 NODE_22352_length_911_cov_116.038813_g17274_i0forward_frame_2 - 0.019 15.3 7.3 0.019 15.3 7.3 2.6 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 CN_hydrolase PF00795.22 NODE_22347_length_911_cov_206.780822_g17270_i0reverse_frame_3 - 0.00018 21.0 0.0 0.00023 20.6 0.0 1.3 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase CN_hydrolase PF00795.22 NODE_22347_length_911_cov_206.780822_g17270_i0reverse_frame_2 - 7.3e-34 117.3 0.0 1.1e-32 113.5 0.0 2.0 1 1 0 1 1 1 1 Carbon-nitrogen hydrolase Asp PF00026.23 NODE_22333_length_911_cov_1218.731735_g17257_i0reverse_frame_3 - 1.4e-31 110.1 1.3 1.6e-31 109.9 1.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_22333_length_911_cov_1218.731735_g17257_i0reverse_frame_3 - 3e-06 27.6 0.3 2.4e-05 24.6 0.1 2.1 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 NODE_22333_length_911_cov_1218.731735_g17257_i0reverse_frame_3 - 0.039 13.6 0.0 0.068 12.8 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Asp PF00026.23 NODE_22332_length_911_cov_1233.803653_g17256_i0reverse_frame_3 - 8e-33 114.2 1.5 9.5e-33 113.9 1.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_22332_length_911_cov_1233.803653_g17256_i0reverse_frame_3 - 3e-06 27.6 0.3 2.4e-05 24.6 0.1 2.1 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 NODE_22332_length_911_cov_1233.803653_g17256_i0reverse_frame_3 - 0.039 13.6 0.0 0.068 12.8 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal CBM9_1 PF06452.11 ORF97918 - 0.00054 19.9 0.0 0.0012 18.8 0.0 1.6 1 1 0 1 1 1 1 Carbohydrate family 9 binding domain-like Glyco_transf_25 PF01755.17 ORF93482 - 6.8e-12 45.7 0.0 1.1e-11 45.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) tRNA-synt_2 PF00152.20 ORF88707 - 3.3e-45 154.5 0.0 5.7e-45 153.8 0.0 1.4 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) SRTM1 PF15872.5 ORF87088 - 0.0016 18.6 0.1 0.0016 18.6 0.1 1.9 2 0 0 2 2 2 1 Serine-rich and transmembrane domain-containing protein 1 TM_helix PF05552.12 ORF87088 - 0.81 9.7 7.1 0.17 11.9 0.7 2.4 2 0 0 2 2 2 0 Conserved TM helix C2 PF00168.30 ORF86083 - 4e-14 52.8 0.0 6.4e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 C2 domain ZZ PF00569.17 ORF86083 - 0.0014 18.4 9.4 0.0025 17.6 9.4 1.3 1 0 0 1 1 1 1 Zinc finger, ZZ type C1_2 PF03107.16 ORF86083 - 0.0054 17.0 6.4 0.0086 16.4 6.4 1.3 1 0 0 1 1 1 1 C1 domain DUF4774 PF15999.5 ORF86083 - 1 9.3 9.6 0.08 12.8 4.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4774) Peptidase_M20 PF01546.28 ORF79651 - 6.3e-06 26.0 0.0 7.3e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF79651 - 0.0013 18.6 0.0 0.007 16.3 0.0 2.0 2 0 0 2 2 2 1 Peptidase dimerisation domain Mito_carr PF00153.27 ORF7959 - 1.3e-66 220.5 3.4 9.7e-26 89.5 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Spidroin_N PF16763.5 ORF79274 - 0.033 14.2 1.7 0.033 14.2 1.7 2.0 2 0 0 2 2 2 0 Major ampullate spidroin 1, spider silk protein 1, N-term CSD PF00313.22 ORF75887 - 3.3e-06 26.9 0.0 6e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF75887 - 0.0003 20.4 0.0 0.00053 19.6 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF11 PF01345.18 ORF75887 - 0.14 12.4 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF11 Lipoprotein_7 PF01540.16 ORF75617 - 0.017 14.5 3.3 0.13 11.5 0.6 2.0 2 0 0 2 2 2 0 Adhesin lipoprotein DUF945 PF06097.11 ORF75617 - 0.14 11.3 4.3 0.16 11.1 2.4 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF945) DUF1759 PF03564.15 ORF75617 - 0.14 12.1 0.0 0.69 9.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) SCAB-ABD PF16711.5 ORF75617 - 0.71 9.8 4.6 0.48 10.4 1.5 2.2 2 0 0 2 2 2 0 Actin-binding domain of plant-specific actin-binding protein Lectin_leg-like PF03388.13 ORF74944 - 3.7e-16 59.2 0.2 5.4e-16 58.6 0.2 1.3 1 0 0 1 1 1 1 Legume-like lectin family Sulfate_transp PF00916.20 ORF72944 - 5.7e-06 25.3 2.5 7.3e-06 25.0 2.5 1.2 1 0 0 1 1 1 1 Sulfate permease family MBOAT PF03062.19 ORF69420 - 5.7e-18 65.4 17.3 6.7e-18 65.2 16.7 1.4 1 1 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family DUF1500 PF07389.12 ORF69420 - 0.23 11.6 4.0 2 8.6 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1500) Ion_trans PF00520.31 ORF67290 - 1.1e-08 34.6 11.3 1.1e-08 34.6 11.3 2.0 2 0 0 2 2 2 1 Ion transport protein CENP-F_leu_zip PF10473.9 ORF65435 - 0.0023 17.9 4.5 0.0048 16.9 4.5 1.5 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DivIVA PF05103.13 ORF65435 - 0.018 15.1 3.7 0.033 14.3 3.7 1.4 1 0 0 1 1 1 0 DivIVA protein DUF2205 PF10224.9 ORF65435 - 0.029 14.4 2.5 0.07 13.1 2.5 1.7 1 0 0 1 1 1 0 Short coiled-coil protein YabA PF06156.13 ORF65435 - 0.057 14.1 5.7 0.15 12.7 5.7 1.7 1 0 0 1 1 1 0 Initiation control protein YabA DUF948 PF06103.11 ORF65435 - 0.1 12.9 1.1 1 9.6 2.6 1.9 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF4795 PF16043.5 ORF65435 - 0.16 11.5 5.2 0.57 9.7 3.8 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) ZapB PF06005.12 ORF65435 - 0.28 11.6 6.8 0.15 12.6 4.1 1.9 2 0 0 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 ORF65435 - 0.3 10.9 2.1 0.61 9.9 2.1 1.5 1 0 0 1 1 1 0 Septum formation initiator DUF3450 PF11932.8 ORF65435 - 0.31 10.3 2.5 0.52 9.6 2.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Ehrlichia_rpt PF09528.10 ORF65435 - 1.3 8.5 3.5 2.7 7.5 3.5 1.4 1 0 0 1 1 1 0 Ehrlichia tandem repeat (Ehrlichia_rpt) VASP_tetra PF08776.11 ORF64834 - 0.34 10.5 4.1 0.9 9.2 4.1 1.7 1 0 0 1 1 1 0 VASP tetramerisation domain Borrelia_P83 PF05262.11 ORF64834 - 0.64 8.4 6.3 0.87 8.0 6.3 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein ERM PF00769.19 ORF63069 - 0.0026 17.6 36.7 0.0026 17.6 36.7 2.4 1 1 1 2 2 2 1 Ezrin/radixin/moesin family Spc7 PF08317.11 ORF63069 - 0.0031 16.4 19.7 0.0031 16.4 19.7 2.5 2 1 0 2 2 2 1 Spc7 kinetochore protein DPM3 PF08285.11 ORF63069 - 0.85 9.9 2.2 3.3 8.0 2.2 2.0 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) HsbA PF12296.8 ORF63069 - 1.1 9.6 3.8 19 5.7 0.0 2.8 2 1 1 3 3 3 0 Hydrophobic surface binding protein A CorA PF01544.18 ORF63069 - 2 7.7 13.1 3.7 6.8 2.3 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF948 PF06103.11 ORF63069 - 8.4 6.7 10.8 3.7 7.9 1.9 3.3 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) ubiquitin PF00240.23 ORF62403 - 5.7e-05 22.8 0.0 0.0001 22.0 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF62403 - 0.046 14.2 0.0 0.18 12.3 0.0 2.0 3 0 0 3 3 3 0 Ubiquitin-like domain YukD PF08817.10 ORF62403 - 0.32 11.7 1.4 3.8 8.3 0.1 3.0 4 0 0 4 4 4 0 WXG100 protein secretion system (Wss), protein YukD FAD-SLDH PF12318.8 ORF59062 - 0.00056 20.0 0.1 0.78 9.8 0.0 2.1 2 0 0 2 2 2 2 Membrane bound FAD containing D-sorbitol dehydrogenase RPAP3_C PF13877.6 ORF59062 - 0.045 14.3 0.0 0.12 12.9 0.0 1.8 1 1 0 1 1 1 0 Potential Monad-binding region of RPAP3 GTP_EFTU_D3 PF03143.17 ORF58827 - 6.9e-34 116.5 0.0 1.2e-33 115.7 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU PF00009.27 ORF58827 - 4e-23 82.0 0.0 5.8e-23 81.5 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF58827 - 3.1e-18 65.9 6.7 4.6e-18 65.4 6.0 1.7 2 0 0 2 2 2 1 Elongation factor Tu domain 2 cobW PF02492.19 ORF58827 - 0.1 12.2 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Serpin PF00079.20 ORF56998 - 8.5e-63 212.9 0.0 1e-62 212.6 0.0 1.0 1 0 0 1 1 1 1 Serpin (serine protease inhibitor) NHL PF01436.21 ORF51084 - 2.4e-27 93.6 4.4 4.4e-08 32.8 0.2 5.3 5 0 0 5 5 5 5 NHL repeat SGL PF08450.12 ORF51084 - 0.0015 18.2 0.0 0.01 15.5 0.0 2.0 1 1 1 2 2 2 1 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 ORF51084 - 0.012 15.8 0.0 41 4.4 0.0 3.8 3 1 1 4 4 4 0 Strictosidine synthase ABC_tran PF00005.27 ORF4700 - 4e-39 134.3 0.7 9.4e-39 133.1 0.1 1.8 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF4700 - 3.3e-09 36.5 5.3 3.3e-07 30.0 0.9 2.3 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF4700 - 1.8e-05 25.0 0.2 0.00029 21.1 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 ORF4700 - 3.8e-05 24.1 0.3 0.002 18.5 0.3 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF4700 - 0.00011 22.7 0.0 0.00021 21.7 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF4700 - 0.00011 22.0 0.0 0.016 14.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF4700 - 0.00092 18.8 0.1 0.071 12.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 ORF4700 - 0.001 19.0 0.8 0.0024 17.7 0.8 1.7 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF4700 - 0.001 18.8 0.1 0.0023 17.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF4700 - 0.0018 18.1 5.3 0.0066 16.2 5.3 2.1 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF4700 - 0.003 17.5 0.0 0.0086 16.0 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 ORF4700 - 0.0063 16.5 0.1 0.083 12.9 0.0 2.6 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) G-alpha PF00503.20 ORF4700 - 0.0083 15.3 0.1 0.012 14.8 0.1 1.3 1 1 0 1 1 1 1 G-protein alpha subunit AAA_17 PF13207.6 ORF4700 - 0.01 16.3 1.0 2.3 8.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain ECH_2 PF16113.5 ORF4700 - 0.018 14.6 0.5 0.026 14.0 0.5 1.2 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase AAA_7 PF12775.7 ORF4700 - 0.035 13.6 0.0 0.069 12.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_33 PF13671.6 ORF4700 - 0.037 14.2 0.1 0.074 13.2 0.1 1.8 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 ORF4700 - 0.038 13.9 0.3 5.1 7.0 0.1 2.4 2 0 0 2 2 2 0 NTPase APS_kinase PF01583.20 ORF4700 - 0.042 13.7 0.0 0.084 12.8 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase RNA_helicase PF00910.22 ORF4700 - 0.058 13.8 0.2 0.28 11.6 0.1 2.3 2 1 0 2 2 2 0 RNA helicase AAA_18 PF13238.6 ORF4700 - 0.065 13.8 0.8 0.21 12.1 0.0 2.2 3 1 0 3 3 3 0 AAA domain IstB_IS21 PF01695.17 ORF4700 - 0.09 12.5 0.3 8.8 6.0 0.0 2.5 2 1 0 2 2 2 0 IstB-like ATP binding protein AAA_23 PF13476.6 ORF4700 - 0.14 12.6 0.1 0.14 12.6 0.1 2.5 2 1 0 2 2 1 0 AAA domain FpoO PF10621.9 ORF4700 - 0.15 12.4 0.0 0.33 11.3 0.0 1.5 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO SbcCD_C PF13558.6 ORF4700 - 0.65 10.3 4.5 1.2 9.5 1.2 2.5 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit Aldose_epim PF01263.20 ORF4651 - 1.8e-31 109.6 0.0 3.2e-31 108.8 0.0 1.5 1 1 0 1 1 1 1 Aldose 1-epimerase Sigma_reg_N PF13800.6 ORF44519 - 0.00042 20.5 5.8 0.76 10.1 0.3 3.3 3 0 0 3 3 3 2 Sigma factor regulator N-terminal PGG PF13962.6 ORF44519 - 0.0066 16.3 0.5 0.16 11.8 0.0 2.2 2 0 0 2 2 2 1 Domain of unknown function Comm PF15957.5 ORF44519 - 0.011 16.0 0.4 2 8.8 0.7 2.5 2 0 0 2 2 2 0 Commissureless DUF2207 PF09972.9 ORF44519 - 0.037 12.8 0.9 0.087 11.6 0.9 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Cyt_bd_oxida_II PF02322.15 ORF44519 - 0.039 13.3 1.7 1.3 8.3 0.0 2.3 2 1 0 2 2 2 0 Cytochrome bd terminal oxidase subunit II Glucos_trans_II PF14264.6 ORF44519 - 0.086 12.2 10.3 1.3 8.3 1.3 2.3 2 1 0 2 2 2 0 Glucosyl transferase GtrII Shisa PF13908.6 ORF44519 - 0.093 13.0 0.1 0.093 13.0 0.1 3.3 3 1 0 4 4 4 0 Wnt and FGF inhibitory regulator DUF1129 PF06570.11 ORF44519 - 0.29 10.6 0.0 0.29 10.6 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1129) DUF1600 PF07667.11 ORF44519 - 1.7 8.9 11.4 3.6 7.8 2.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1600) RSN1_TM PF13967.6 ORF44519 - 2.2 8.0 6.4 2 8.1 0.3 2.8 3 0 0 3 3 3 0 Late exocytosis, associated with Golgi transport DUF4834 PF16118.5 ORF44519 - 2.3 9.2 0.0 2.3 9.2 0.0 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) SdpI PF13630.6 ORF44519 - 4.6 7.5 0.0 4.6 7.5 0.0 3.0 3 0 0 3 3 3 0 SdpI/YhfL protein family PepSY_TM_like_2 PF16357.5 ORF44519 - 7 6.6 11.9 8.4 6.3 0.8 3.5 2 1 2 4 4 4 0 Putative PepSY_TM-like AA_kinase PF00696.28 ORF40321 - 2.8e-14 53.3 0.0 7.2e-14 52.0 0.0 1.7 1 1 0 1 1 1 1 Amino acid kinase family Thaumatin PF00314.17 ORF39554 - 3.3e-20 72.7 9.4 2.9e-19 69.6 9.4 2.2 1 1 0 1 1 1 1 Thaumatin family LysR_substrate PF03466.20 ORF38484 - 2.8e-25 88.9 0.1 4.2e-25 88.3 0.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF38484 - 2.7e-14 52.8 0.7 1e-13 51.0 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family Chloroa_b-bind PF00504.21 ORF36593 - 1.9e-50 171.6 0.7 1.2e-28 100.7 0.0 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF36593 - 0.03 14.6 0.0 4.5 7.5 0.0 2.6 3 0 0 3 3 3 0 Butirosin biosynthesis protein H, N-terminal sCache_3_2 PF17203.4 ORF34027 - 8.4e-23 81.0 0.5 2.6e-22 79.4 0.2 1.8 2 0 0 2 2 2 1 Single cache domain 3 PAS PF00989.25 ORF34027 - 6.5e-09 35.8 0.0 1.2e-08 34.9 0.0 1.5 1 0 0 1 1 1 1 PAS fold dCache_1 PF02743.18 ORF34027 - 1.1e-06 28.6 0.1 7.4e-06 25.9 0.0 2.0 2 0 0 2 2 2 1 Cache domain PAS_8 PF13188.7 ORF34027 - 4.8e-06 26.5 0.0 1.4e-05 25.0 0.0 1.8 1 0 0 1 1 1 1 PAS domain dCache_3 PF14827.6 ORF34027 - 0.0019 17.9 0.3 0.011 15.4 0.0 2.0 2 0 0 2 2 2 1 Double sensory domain of two-component sensor kinase LrgB PF04172.16 ORF34027 - 0.0079 15.7 2.2 0.17 11.4 0.2 2.2 2 0 0 2 2 2 1 LrgB-like family PAS_10 PF13596.6 ORF34027 - 0.0094 16.5 0.0 0.041 14.5 0.0 2.0 2 0 0 2 2 2 1 PAS domain DUF996 PF06195.13 ORF34027 - 0.014 15.7 4.1 2.3 8.5 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF996) sCache_3_3 PF17202.4 ORF34027 - 0.016 15.6 0.0 0.037 14.5 0.0 1.6 1 0 0 1 1 1 0 Single cache domain 3 DUF2530 PF10745.9 ORF34027 - 0.064 13.5 0.5 2.9 8.2 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2530) PAS_7 PF12860.7 ORF34027 - 0.092 12.9 0.0 0.2 11.8 0.0 1.6 1 0 0 1 1 1 0 PAS fold Peptidase_S9 PF00326.21 ORF32640 - 4.2e-48 163.6 0.0 5e-48 163.4 0.0 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 ORF32640 - 5e-11 42.6 0.2 1.4e-10 41.2 0.1 1.6 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 ORF32640 - 2.6e-10 40.0 0.0 7e-06 25.5 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S15 PF02129.18 ORF32640 - 1.1e-06 28.4 0.2 0.071 12.7 0.0 2.1 1 1 0 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) AXE1 PF05448.12 ORF32640 - 0.00034 19.4 0.2 1.6 7.4 0.0 3.0 3 0 0 3 3 3 2 Acetyl xylan esterase (AXE1) Abhydrolase_3 PF07859.13 ORF32640 - 0.0014 18.5 0.1 0.018 14.9 0.1 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF32640 - 0.007 16.5 0.0 0.041 14.0 0.0 2.0 2 0 0 2 2 2 1 TAP-like protein Abhydrolase_1 PF00561.20 ORF32640 - 0.0094 15.6 0.0 0.077 12.6 0.0 1.9 1 1 1 2 2 2 1 alpha/beta hydrolase fold FSH1 PF03959.13 ORF32640 - 0.019 14.7 0.0 0.028 14.1 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) PhoPQ_related PF10142.9 ORF32640 - 0.044 12.4 0.0 0.054 12.1 0.0 1.1 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein DUF829 PF05705.14 ORF32640 - 0.063 13.2 0.0 0.096 12.6 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF829) Abhydrolase_2 PF02230.16 ORF32640 - 0.24 11.2 0.0 0.46 10.3 0.0 1.4 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase PAE PF03283.13 ORF32640 - 0.27 10.3 0.1 0.49 9.5 0.1 1.3 1 0 0 1 1 1 0 Pectinacetylesterase Radical_SAM PF04055.21 ORF28314 - 7.2e-15 55.8 0.0 1.1e-14 55.2 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily LIAS_N PF16881.5 ORF28314 - 1.5e-07 31.8 0.1 1.4e-06 28.7 0.1 2.1 2 0 0 2 2 2 1 N-terminal domain of lipoyl synthase of Radical_SAM family ABC_tran PF00005.27 ORF21839 - 4e-39 134.3 0.7 9.4e-39 133.1 0.1 1.8 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF21839 - 3.3e-09 36.5 5.3 3.3e-07 30.0 0.9 2.3 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF21839 - 1.8e-05 25.0 0.2 0.00029 21.1 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 ORF21839 - 3.8e-05 24.1 0.3 0.002 18.5 0.3 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF21839 - 0.00011 22.7 0.0 0.00021 21.7 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF21839 - 0.00011 22.0 0.0 0.016 14.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF21839 - 0.00092 18.8 0.1 0.071 12.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 ORF21839 - 0.001 19.0 0.8 0.0024 17.7 0.8 1.7 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF21839 - 0.001 18.8 0.1 0.0023 17.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF21839 - 0.0018 18.1 5.3 0.0066 16.2 5.3 2.1 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF21839 - 0.003 17.5 0.0 0.0086 16.0 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 ORF21839 - 0.0063 16.5 0.1 0.083 12.9 0.0 2.6 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) G-alpha PF00503.20 ORF21839 - 0.0083 15.3 0.1 0.012 14.8 0.1 1.3 1 1 0 1 1 1 1 G-protein alpha subunit AAA_17 PF13207.6 ORF21839 - 0.01 16.3 1.0 2.3 8.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain ECH_2 PF16113.5 ORF21839 - 0.018 14.6 0.5 0.026 14.0 0.5 1.2 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase AAA_7 PF12775.7 ORF21839 - 0.035 13.6 0.0 0.069 12.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_33 PF13671.6 ORF21839 - 0.037 14.2 0.1 0.074 13.2 0.1 1.8 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 ORF21839 - 0.038 13.9 0.3 5.1 7.0 0.1 2.4 2 0 0 2 2 2 0 NTPase APS_kinase PF01583.20 ORF21839 - 0.042 13.7 0.0 0.084 12.8 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase RNA_helicase PF00910.22 ORF21839 - 0.058 13.8 0.2 0.28 11.6 0.1 2.3 2 1 0 2 2 2 0 RNA helicase AAA_18 PF13238.6 ORF21839 - 0.065 13.8 0.8 0.21 12.1 0.0 2.2 3 1 0 3 3 3 0 AAA domain IstB_IS21 PF01695.17 ORF21839 - 0.09 12.5 0.3 8.8 6.0 0.0 2.5 2 1 0 2 2 2 0 IstB-like ATP binding protein AAA_23 PF13476.6 ORF21839 - 0.14 12.6 0.1 0.14 12.6 0.1 2.5 2 1 0 2 2 1 0 AAA domain FpoO PF10621.9 ORF21839 - 0.15 12.4 0.0 0.33 11.3 0.0 1.5 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO SbcCD_C PF13558.6 ORF21839 - 0.65 10.3 4.5 1.2 9.5 1.2 2.5 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit PHR PF08005.12 ORF16888 - 2.9e-11 44.2 2.9 2.9e-11 44.2 2.9 1.8 2 0 0 2 2 2 1 PHR domain NMO PF03060.15 ORF111328 - 4.1e-48 164.5 0.2 5.8e-48 164.0 0.2 1.2 1 1 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 ORF111328 - 1.8e-05 23.9 7.0 2.7e-05 23.3 7.0 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 ORF111328 - 0.43 9.5 8.6 0.81 8.6 8.6 1.4 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain PhyH PF05721.13 ORF110867 - 3.8e-09 37.1 0.0 8.4e-09 36.0 0.0 1.6 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) DUF1479 PF07350.12 ORF110867 - 0.14 10.8 0.0 3 6.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1479) Ribosomal_L3 PF00297.22 ORF109231 - 1.6e-118 395.9 1.2 1.8e-118 395.8 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Herpes_UL87 PF03043.14 ORF109231 - 0.0034 15.9 0.2 0.0045 15.5 0.2 1.1 1 0 0 1 1 1 1 Herpesvirus UL87 family TAN PF11640.8 ORF109231 - 0.039 14.1 1.0 0.065 13.4 1.0 1.3 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair DUF5040 PF16443.5 NODE_22580_length_904_cov_108.116226_g17470_i0reverse_frame_1 - 0.06 12.7 2.7 1 8.7 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5040) Vta1 PF04652.16 NODE_22512_length_906_cov_81.807118_g17407_i0reverse_frame_1 - 7.2e-11 42.2 2.4 1e-10 41.8 2.4 1.2 1 0 0 1 1 1 1 Vta1 like DUF805 PF05656.14 NODE_22512_length_906_cov_81.807118_g17407_i0forward_frame_1 - 0.55 10.7 6.0 2.1 8.8 6.0 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF805) Apolipoprotein PF01442.18 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 0.02 14.8 12.4 0.032 14.1 6.6 2.7 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain Sec23_helical PF04815.15 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 0.68 9.8 5.1 6.6 6.6 4.1 2.9 2 1 0 2 2 2 0 Sec23/Sec24 helical domain DUF883 PF05957.13 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 2.4 8.8 11.5 4.8 7.9 0.3 3.8 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF883) WXG100 PF06013.12 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 3.8 7.8 11.6 21 5.4 0.1 3.9 3 2 1 4 4 4 0 Proteins of 100 residues with WXG Phage_lysozyme PF00959.19 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 4.7 7.7 10.4 4.1 7.9 1.0 3.3 2 1 0 3 3 3 0 Phage lysozyme DUF4046 PF13255.6 NODE_22474_length_907_cov_136.122706_g17377_i0reverse_frame_2 - 0.24 12.0 2.1 6.5 7.4 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4046) TB PF00683.17 NODE_22424_length_909_cov_2.361556_g17335_i0forward_frame_2 - 0.047 13.4 0.6 0.085 12.6 0.6 1.3 1 0 0 1 1 1 0 TB domain zf-rbx1 PF12678.7 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 4.6e-10 39.6 0.1 1e-09 38.5 0.1 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 1.6e-08 34.7 0.4 4.2e-08 33.4 0.1 1.9 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 2.3e-06 27.3 0.6 5.3e-06 26.2 0.2 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 6e-05 23.0 0.1 0.00016 21.6 0.1 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.0001 22.1 0.1 0.0003 20.6 0.1 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.00021 20.8 0.9 0.0005 19.6 0.3 1.8 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.00023 21.1 0.0 0.00049 20.0 0.0 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.00094 19.2 0.1 0.0018 18.3 0.1 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.0011 19.0 0.1 0.0024 18.0 0.1 1.5 1 0 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4_4 PF15227.6 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.0015 18.7 0.3 0.0071 16.5 0.1 2.2 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_11 PF17123.5 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.0041 16.8 0.2 0.0099 15.6 0.2 1.6 1 0 0 1 1 1 1 RING-like zinc finger zinc_ribbon_16 PF17034.5 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.0062 16.7 0.1 0.011 15.9 0.1 1.5 1 0 0 1 1 1 1 Zinc-ribbon like family zf-C3HC4_3 PF13920.6 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.008 16.0 0.0 0.017 15.0 0.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.024 14.5 0.1 0.048 13.5 0.1 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 RINGv PF12906.7 NODE_22418_length_909_cov_84.458810_g17329_i0reverse_frame_2 - 0.12 12.5 0.5 0.27 11.4 0.5 1.5 1 0 0 1 1 1 0 RING-variant domain EF-hand_8 PF13833.6 ORF99688 - 0.017 14.9 0.0 0.044 13.6 0.0 1.7 2 0 0 2 2 2 0 EF-hand domain pair BTK PF00779.19 ORF94819 - 0.091 12.6 1.5 0.18 11.6 1.5 1.5 1 0 0 1 1 1 0 BTK motif UCH PF00443.29 ORF92185 - 4.1e-19 69.1 0.0 5.5e-19 68.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF92185 - 7.5e-07 29.0 0.0 9.8e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Antimicrobial25 PF16839.5 ORF92185 - 0.034 14.2 0.4 0.034 14.2 0.4 2.0 2 0 0 2 2 2 0 Nematode antimicrobial peptide adh_short_C2 PF13561.6 ORF92145 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF92145 - 9.1e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF92145 - 4e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF92145 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF92145 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) fn3_3 PF14686.6 ORF88986 - 0.00043 20.0 1.2 0.00084 19.1 0.2 1.9 2 0 0 2 2 2 1 Polysaccharide lyase family 4, domain II He_PIG PF05345.12 ORF88986 - 0.021 15.0 3.7 0.021 15.0 3.7 3.0 3 2 0 3 3 3 0 Putative Ig domain TRAP_beta PF05753.14 ORF88986 - 0.26 10.7 5.3 0.24 10.8 0.5 2.6 2 1 1 3 3 3 0 Translocon-associated protein beta (TRAPB) adh_short_C2 PF13561.6 ORF87710 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF87710 - 9.2e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF87710 - 3.9e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF87710 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF87710 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) Peptidase_C1 PF00112.23 ORF87630 - 2.5e-64 217.3 6.5 3.1e-64 217.1 6.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF87630 - 0.0014 17.5 4.4 0.15 10.8 0.5 2.6 2 1 1 3 3 3 2 Peptidase C1-like family Peptidase_C2 PF00648.21 ORF87630 - 0.073 12.1 0.1 0.11 11.6 0.1 1.2 1 0 0 1 1 1 0 Calpain family cysteine protease Aminotran_1_2 PF00155.21 ORF85536 - 1.2e-20 74.1 0.0 1.6e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II FAD_binding_3 PF01494.19 ORF85371 - 9.4e-06 25.1 0.0 1.3e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain DUF1840 PF08895.11 ORF84943 - 0.17 12.2 5.3 0.74 10.2 0.9 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF1840) GP38 PF05268.11 ORF8368 - 0.13 11.9 6.6 0.2 11.3 6.6 1.3 1 0 0 1 1 1 0 Phage tail fibre adhesin Gp38 Tail_VII PF17091.5 ORF79527 - 0.15 11.9 3.7 0.34 10.8 1.1 2.4 2 0 0 2 2 2 0 Inovirus G7P protein adh_short_C2 PF13561.6 ORF78906 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF78906 - 9.1e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF78906 - 4e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF78906 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF78906 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) OB_NTP_bind PF07717.16 ORF78285 - 4.9e-15 55.7 0.1 8.8e-15 54.8 0.1 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 ORF78285 - 0.029 14.7 0.0 0.1 13.0 0.0 1.8 2 0 0 2 2 2 0 Helicase conserved C-terminal domain Abhydrolase_3 PF07859.13 ORF74877 - 3.5e-31 108.7 0.0 4.2e-31 108.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF74877 - 7.1e-08 31.7 0.0 9e-08 31.4 0.0 1.1 1 0 0 1 1 1 1 Steryl acetyl hydrolase COesterase PF00135.28 ORF74877 - 0.0051 15.7 0.0 0.013 14.4 0.0 1.5 2 0 0 2 2 2 1 Carboxylesterase family Ion_trans PF00520.31 ORF73963 - 2.2e-15 56.6 8.3 3.2e-15 56.0 8.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF73963 - 5.3e-11 41.5 0.8 0.00018 21.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF73963 - 2.2e-08 33.0 0.7 0.001 18.4 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF73963 - 1.1e-07 32.1 0.1 2.9e-07 30.8 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF73963 - 2.7e-06 26.6 2.1 0.00011 21.6 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF73963 - 0.00062 19.6 1.0 0.57 10.1 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF73963 - 0.014 15.7 0.0 0.028 14.7 0.0 1.5 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region PRA1 PF03208.19 ORF73963 - 0.054 13.1 7.8 0.12 12.0 7.8 1.5 1 1 0 1 1 1 0 PRA1 family protein PKD_channel PF08016.12 ORF73963 - 0.1 11.2 8.8 0.16 10.7 8.8 1.3 1 0 0 1 1 1 0 Polycystin cation channel Anoctamin PF04547.12 ORF73963 - 3.4 6.4 5.3 7.2 5.3 5.3 1.5 1 1 0 1 1 1 0 Calcium-activated chloride channel Rxt3 PF08642.10 ORF73119 - 4.6e-09 37.1 2.0 4.7e-07 30.6 0.0 3.0 2 1 1 3 3 3 2 Histone deacetylation protein Rxt3 LCCL PF03815.19 ORF73119 - 1.8e-05 24.8 0.1 3.1e-05 24.0 0.1 1.4 1 0 0 1 1 1 1 LCCL domain Mito_carr PF00153.27 ORF73077 - 1.4e-55 185.2 0.0 3.8e-22 78.0 0.1 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF4148 PF13663.6 ORF73077 - 8.6 6.6 8.5 1.3 9.2 3.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) LRRC37AB_C PF14914.6 ORF72220 - 2.4 8.1 6.1 0.22 11.5 0.9 1.9 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain Sigma54_activat PF00158.26 ORF70159 - 3.4e-71 238.4 0.0 1.2e-70 236.5 0.0 1.8 2 0 0 2 2 2 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 ORF70159 - 5.3e-23 81.7 0.0 2.2e-22 79.7 0.0 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 ORF70159 - 2e-06 27.8 0.0 3.6e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 ORF70159 - 6.9e-05 23.3 0.0 0.00013 22.4 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 ORF70159 - 0.0021 18.2 0.0 0.0041 17.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 ORF70159 - 0.013 14.9 0.0 5 6.4 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI HTH_8 PF02954.19 ORF70159 - 0.019 14.7 0.2 0.019 14.7 0.2 2.3 3 0 0 3 3 3 0 Bacterial regulatory protein, Fis family AAA_3 PF07726.11 ORF70159 - 0.032 14.1 0.0 0.08 12.8 0.0 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) UPF0175 PF03683.13 ORF70159 - 0.049 13.3 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0175) NACHT PF05729.12 ORF70159 - 0.1 12.5 0.0 1.2 9.0 0.0 2.3 2 1 0 2 2 2 0 NACHT domain AAA_16 PF13191.6 ORF70159 - 0.12 12.7 0.2 0.42 11.0 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain ATP-grasp_4 PF13535.6 ORF70159 - 0.15 11.6 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 ATP-grasp domain AAA_7 PF12775.7 ORF70159 - 0.17 11.4 0.0 0.34 10.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region MCM PF00493.23 ORF70159 - 0.18 10.9 0.0 0.49 9.5 0.0 1.6 1 1 0 1 1 1 0 MCM P-loop domain Ribonuclease_T2 PF00445.18 ORF7005 - 4.5e-09 36.8 0.0 8.9e-09 35.8 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease T2 family DUF2255 PF10012.9 ORF7005 - 0.059 13.5 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2255) Squash PF00299.18 ORF7005 - 6.1 7.0 19.8 1.6 8.8 6.4 3.0 2 0 0 2 2 2 0 Squash family serine protease inhibitor Asp PF00026.23 ORF63417 - 5.1e-13 49.1 0.0 9.6e-13 48.2 0.0 1.4 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF63417 - 0.14 12.0 0.0 0.36 10.6 0.0 1.6 2 0 0 2 2 2 0 Xylanase inhibitor C-terminal DNA_pol_phi PF04931.13 ORF63417 - 1.8 6.6 3.3 2.3 6.2 3.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi GvpG PF05120.12 ORF63410 - 0.38 10.8 7.2 0.71 9.9 1.5 3.0 2 0 0 2 2 2 0 Gas vesicle protein G CDC27 PF09507.10 ORF62806 - 0.03 13.7 45.0 0.042 13.3 45.0 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 PPP4R2 PF09184.11 ORF62806 - 1.6 8.2 24.2 2.3 7.7 24.2 1.2 1 0 0 1 1 1 0 PPP4R2 LRRC37AB_C PF14914.6 ORF62767 - 2.4 8.0 6.1 0.22 11.5 0.9 1.8 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain adh_short_C2 PF13561.6 ORF61847 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF61847 - 9.1e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF61847 - 4e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF61847 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF61847 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) HTH_AraC PF00165.23 ORF60822 - 7.1e-23 80.2 0.3 1.6e-11 44.0 0.2 2.7 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 ORF60822 - 4.1e-19 68.6 0.1 8.5e-19 67.6 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 ORF60822 - 0.0047 16.6 0.1 0.008 15.9 0.1 1.3 1 0 0 1 1 1 1 Cupin domain Rrf2 PF02082.20 ORF60822 - 0.094 13.1 0.1 0.2 12.0 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator BPD_transp_1 PF00528.22 ORF56431 - 8.5e-26 90.8 9.8 8.5e-26 90.8 9.8 2.3 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 ORF56431 - 3.3e-14 52.6 1.4 3.3e-14 52.6 1.4 3.1 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C DUF3176 PF11374.8 ORF56431 - 0.16 12.2 4.2 0.19 11.9 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3176) SafA PF17073.5 ORF56431 - 0.64 10.0 2.9 2.9 7.9 0.4 2.6 2 0 0 2 2 2 0 Two-component-system connector protein DUF1840 PF08895.11 ORF55489 - 0.17 12.2 5.3 0.74 10.2 0.9 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF1840) PS_Dcarbxylase PF02666.15 ORF52111 - 2e-40 138.5 0.2 2.6e-40 138.1 0.2 1.2 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase FRB_dom PF08771.11 ORF52111 - 0.42 11.0 3.3 0.48 10.9 0.8 2.3 3 0 0 3 3 3 0 FKBP12-rapamycin binding domain Aldo_ket_red PF00248.21 ORF51528 - 1.7e-53 181.7 0.0 2.3e-53 181.3 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family DnaJ PF00226.31 ORF50272 - 1.3e-17 63.7 0.1 2.1e-17 63.0 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain Ndc1_Nup PF09531.10 ORF50272 - 4.6 5.8 5.4 5.2 5.6 5.4 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup EF-hand_1 PF00036.32 ORF40082 - 5e-33 110.2 19.9 1.4e-06 27.4 0.1 7.0 7 0 0 7 7 7 5 EF hand EF-hand_7 PF13499.6 ORF40082 - 6.7e-31 106.6 11.9 1.6e-11 44.5 0.2 4.2 2 1 2 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF40082 - 1.8e-27 92.8 17.3 1.8e-05 24.3 0.0 6.7 7 0 0 7 7 6 5 EF-hand domain EF-hand_5 PF13202.6 ORF40082 - 4.2e-21 73.4 15.9 7.1e-05 22.1 0.0 6.6 6 0 0 6 6 6 6 EF hand EF-hand_8 PF13833.6 ORF40082 - 8.6e-16 57.5 14.7 0.0011 18.8 0.1 6.0 5 1 1 6 6 6 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF40082 - 1.8e-07 31.5 2.7 0.045 14.1 0.2 3.4 3 1 0 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF40082 - 9.4e-07 28.7 1.6 0.077 13.0 0.0 3.7 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF40082 - 6.8e-06 26.3 0.2 0.13 12.6 0.0 3.5 3 1 0 3 3 3 2 EF-hand domain Caleosin PF05042.13 ORF40082 - 1.4e-05 25.1 1.8 0.37 10.7 0.0 4.9 3 1 1 5 5 5 1 Caleosin related protein EF-hand_10 PF14788.6 ORF40082 - 0.00034 20.4 5.6 0.0046 16.8 0.2 3.6 3 1 1 4 4 4 1 EF hand RNA_pol_Rpb1_5 PF04998.17 ORF40082 - 0.087 12.2 0.5 0.1 12.0 0.5 1.3 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 5 p25-alpha PF05517.12 ORF40082 - 0.11 12.7 2.3 3.6 7.7 0.0 3.2 2 2 0 3 3 3 0 p25-alpha Alpha-2-MRAP_C PF06401.11 ORF40082 - 0.11 12.5 1.4 0.5 10.3 0.2 2.1 1 1 0 2 2 2 0 Alpha-2-macroglobulin RAP, C-terminal domain Ku_PK_bind PF08785.11 ORF40082 - 0.11 12.6 1.3 1.8 8.7 0.0 2.8 3 0 0 3 3 3 0 Ku C terminal domain like Dockerin_1 PF00404.18 ORF40082 - 4 7.7 12.6 2.5 8.4 0.3 3.9 4 2 1 5 5 4 0 Dockerin type I domain TPP_enzyme_C PF02775.21 ORF40067 - 6.1e-51 172.2 0.0 9e-51 171.7 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF40067 - 4.4e-23 81.5 0.1 1.1e-22 80.2 0.1 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain XFP_N PF09364.10 ORF40067 - 0.043 12.6 0.2 0.097 11.5 0.1 1.5 1 1 1 2 2 2 0 XFP N-terminal domain Mito_carr PF00153.27 ORF35568 - 1.4e-55 185.2 0.0 3.8e-22 78.0 0.1 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF4148 PF13663.6 ORF35568 - 8.6 6.6 8.5 1.3 9.2 3.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) D-ser_dehydrat PF14031.6 ORF34927 - 0.074 13.7 0.0 0.13 12.9 0.0 1.4 1 0 0 1 1 1 0 Putative serine dehydratase domain UDPGT PF00201.18 ORF2862 - 1.4e-14 53.8 0.0 2.7e-14 52.9 0.0 1.4 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF2862 - 1e-11 45.1 0.0 1.6e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Carb_anhydrase PF00194.21 ORF28 - 2.8e-12 46.7 0.0 6e-12 45.6 0.0 1.5 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DUF485 PF04341.12 ORF28 - 0.16 11.9 0.3 0.32 11.0 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF485 Glyco_hydro_18 PF00704.28 ORF22513 - 8.1e-18 65.2 0.0 1.2e-17 64.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 DTC PF18102.1 ORF22273 - 1.6e-26 93.0 0.0 2.3e-26 92.5 0.0 1.2 1 0 0 1 1 1 1 Deltex C-terminal domain zf-RING_2 PF13639.6 ORF22273 - 1.5e-08 34.8 6.9 1.2e-06 28.7 2.4 2.3 2 0 0 2 2 2 2 Ring finger domain zf-rbx1 PF12678.7 ORF22273 - 2.2e-07 31.1 8.6 1.6e-06 28.3 9.0 2.0 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF22273 - 2.2e-06 27.4 2.7 1.3e-05 25.0 2.7 2.0 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF22273 - 2.8e-06 27.1 9.5 4.1e-05 23.3 3.3 2.3 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF22273 - 2.4e-05 24.2 4.0 0.00049 20.0 1.4 2.3 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF22273 - 2.9e-05 23.7 2.1 0.026 14.3 0.2 2.8 2 0 0 2 2 2 2 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF22273 - 4.7e-05 23.3 6.9 0.00031 20.7 5.4 2.7 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF22273 - 0.00014 21.6 4.1 0.0022 17.8 1.1 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF22273 - 0.00019 20.9 1.3 0.00045 19.8 1.3 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF22273 - 0.00042 20.3 0.9 0.00042 20.3 0.9 2.0 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF22273 - 0.007 16.5 5.6 0.1 12.8 5.6 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF22273 - 0.02 14.7 4.1 0.17 11.7 1.0 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF22273 - 0.054 13.7 7.5 0.073 13.3 0.9 2.4 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING zinc_ribbon_16 PF17034.5 ORF22273 - 0.063 13.5 0.3 0.13 12.5 0.3 1.5 1 0 0 1 1 1 0 Zinc-ribbon like family zf-C3H2C3 PF17122.5 ORF22273 - 0.12 12.5 5.6 0.58 10.2 1.4 2.6 2 0 0 2 2 2 0 Zinc-finger Rad50_zn_hook PF04423.14 ORF22273 - 0.14 12.0 0.9 3.7 7.5 0.2 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif Zn-ribbon_8 PF09723.10 ORF22273 - 0.36 11.0 4.0 1.1 9.4 0.9 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zf-RING_4 PF14570.6 ORF22273 - 0.53 10.1 6.8 0.37 10.6 2.6 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 ORF22273 - 2.8 8.3 8.9 0.3 11.4 3.9 1.9 2 0 0 2 2 2 0 RING-like domain RINGv PF12906.7 ORF22273 - 2.8 8.1 7.2 2.7 8.2 3.9 2.2 2 0 0 2 2 2 0 RING-variant domain IRF PF00605.17 ORF21833 - 6.6 7.1 7.1 3.6 7.9 0.2 3.1 3 1 1 4 4 4 0 Interferon regulatory factor transcription factor DUF2475 PF10629.9 ORF14827 - 2.7e-07 30.7 0.2 0.011 15.9 0.0 2.8 2 0 0 2 2 2 2 Protein of unknown function (DUF2475) TRP PF06011.12 ORF14340 - 0.0032 16.3 4.3 0.0032 16.3 4.3 2.1 2 0 0 2 2 2 1 Transient receptor potential (TRP) ion channel FixQ PF05545.11 ORF14340 - 0.081 12.9 7.2 20 5.2 0.1 4.1 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ SIT PF15330.6 ORF14340 - 0.16 12.5 0.0 0.16 12.5 0.0 3.5 4 0 0 4 4 4 0 SHP2-interacting transmembrane adaptor protein, SIT TMEM154 PF15102.6 ORF14340 - 0.22 11.4 0.1 0.22 11.4 0.1 3.5 3 1 2 5 5 5 0 TMEM154 protein family EI24 PF07264.11 ORF14340 - 1.6 9.0 15.8 0.62 10.3 3.3 2.7 2 1 0 2 2 2 0 Etoposide-induced protein 2.4 (EI24) Cytomega_TRL10 PF06084.11 ORF14340 - 3.7 7.6 5.2 29 4.7 1.2 2.8 2 1 0 2 2 2 0 Cytomegalovirus TRL10 protein UDPGT PF00201.18 ORF11618 - 2.9e-05 23.1 0.0 5.4e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Ion_trans PF00520.31 ORF112582 - 2.2e-15 56.6 8.3 3.2e-15 56.0 8.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF112582 - 5.3e-11 41.5 0.8 0.00018 21.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF112582 - 2.2e-08 33.0 0.7 0.001 18.4 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF112582 - 1.1e-07 32.1 0.1 2.9e-07 30.8 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF112582 - 2.7e-06 26.6 2.1 0.00011 21.6 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF112582 - 0.00062 19.6 1.0 0.57 10.1 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF112582 - 0.014 15.7 0.0 0.028 14.7 0.0 1.5 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region PRA1 PF03208.19 ORF112582 - 0.054 13.1 7.8 0.12 12.0 7.8 1.5 1 1 0 1 1 1 0 PRA1 family protein PKD_channel PF08016.12 ORF112582 - 0.1 11.2 8.8 0.16 10.7 8.8 1.3 1 0 0 1 1 1 0 Polycystin cation channel Anoctamin PF04547.12 ORF112582 - 3.4 6.4 5.3 7.2 5.3 5.3 1.5 1 1 0 1 1 1 0 Calcium-activated chloride channel DUF4207 PF13904.6 ORF110209 - 0.65 9.7 28.9 1.1 8.9 28.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4207) UAA PF08449.11 ORF107977 - 8.3e-17 61.3 4.3 9.4e-17 61.2 4.3 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF107977 - 2.2e-05 24.7 14.7 0.00095 19.3 2.5 2.4 2 0 0 2 2 2 2 EamA-like transporter family Nuc_sug_transp PF04142.15 ORF107977 - 0.0034 16.6 3.1 0.0085 15.3 3.1 1.5 1 1 0 1 1 1 1 Nucleotide-sugar transporter CRT-like PF08627.10 ORF107977 - 0.16 10.9 7.1 0.012 14.5 2.7 1.5 2 1 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like cobW PF02492.19 ORF1077 - 6.8e-09 35.6 0.0 9.8e-09 35.0 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF1077 - 0.0044 16.9 0.0 0.0084 16.0 0.0 1.6 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain DUF2946 PF11162.8 ORF1077 - 0.29 11.8 5.0 1.1 9.9 5.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) adh_short_C2 PF13561.6 ORF107333 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF107333 - 9.1e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF107333 - 4e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF107333 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF107333 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) GxGYxYP_C PF14323.6 ORF103489 - 1.4e-18 67.7 0.5 5.2e-13 49.4 0.5 2.9 2 1 0 2 2 2 2 GxGYxYP putative glycoside hydrolase C-terminal domain Pro_isomerase PF00160.21 NODE_22674_length_901_cov_3515.129330_g17549_i0forward_frame_1 - 4e-31 108.4 0.1 4e-31 108.4 0.1 1.5 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Diphthamide_syn PF01866.17 NODE_22663_length_902_cov_85.945790_g17542_i0reverse_frame_1 - 0.068 12.6 0.2 0.095 12.1 0.2 1.1 1 0 0 1 1 1 0 Putative diphthamide synthesis protein Pkinase PF00069.25 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 1.9e-50 171.7 0.0 3.3e-50 170.9 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 6.1e-32 110.9 0.0 8.4e-32 110.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 6.3e-06 25.4 0.1 1.2e-05 24.4 0.1 1.5 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 9.5e-06 25.7 0.0 1.6e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 0.00023 20.6 0.0 0.00036 19.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 0.0021 16.9 0.0 0.0053 15.6 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase FTA2 PF13095.6 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 0.05 13.2 0.0 0.091 12.4 0.0 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 CBP_BcsR PF10945.8 NODE_22594_length_904_cov_5.764097_g17484_i0forward_frame_3 - 0.056 12.9 0.3 0.12 11.9 0.3 1.6 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR RWD PF05773.22 NODE_22584_length_904_cov_96.498274_g17474_i0forward_frame_3 - 5.2 7.4 6.9 0.9 9.8 1.8 2.2 1 1 0 2 2 2 0 RWD domain HdeA PF06411.11 NODE_22584_length_904_cov_96.498274_g17474_i0forward_frame_2 - 0.15 12.2 0.0 0.34 11.1 0.0 1.6 1 0 0 1 1 1 0 HdeA/HdeB family Kinesin PF00225.23 NODE_22553_length_905_cov_90.587356_g17445_i0reverse_frame_2 - 2e-50 171.6 0.3 2.8e-50 171.1 0.3 1.2 1 0 0 1 1 1 1 Kinesin motor domain PKcGMP_CC PF16808.5 NODE_22519_length_906_cov_7.671642_g17414_i0forward_frame_2 - 6.5e-05 22.7 9.8 0.0022 17.8 1.3 3.6 3 0 0 3 3 3 2 Coiled-coil N-terminus of cGMP-dependent protein kinase CENP-F_leu_zip PF10473.9 NODE_22519_length_906_cov_7.671642_g17414_i0forward_frame_2 - 0.00028 20.9 24.0 0.00066 19.7 6.8 2.8 1 1 2 3 3 3 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Tropomyosin_1 PF12718.7 NODE_22519_length_906_cov_7.671642_g17414_i0forward_frame_2 - 0.012 15.8 3.7 0.012 15.8 3.7 3.1 1 1 0 2 2 2 0 Tropomyosin like DMPK_coil PF08826.10 NODE_22519_length_906_cov_7.671642_g17414_i0forward_frame_2 - 0.013 15.6 9.7 0.078 13.1 2.5 3.1 2 0 0 2 2 2 0 DMPK coiled coil domain like GIT_CC PF16559.5 NODE_22519_length_906_cov_7.671642_g17414_i0forward_frame_2 - 0.076 12.9 12.5 0.47 10.4 0.4 4.2 2 1 2 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF724 PF05266.14 NODE_22519_length_906_cov_7.671642_g17414_i0forward_frame_2 - 3 7.6 18.9 1.9 8.3 6.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DUF1664 PF07889.12 NODE_22519_length_906_cov_7.671642_g17414_i0forward_frame_2 - 6.8 6.7 9.7 13 5.9 0.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 NODE_22519_length_906_cov_7.671642_g17414_i0forward_frame_2 - 8.2 6.6 20.9 0.67 10.1 6.6 2.7 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Homeobox_KN PF05920.11 NODE_22515_length_906_cov_70.743972_g17410_i0reverse_frame_3 - 7.1e-08 32.2 0.3 1.5e-07 31.2 0.3 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_22515_length_906_cov_70.743972_g17410_i0reverse_frame_3 - 1.5e-05 24.7 0.1 2.8e-05 23.9 0.1 1.3 1 0 0 1 1 1 1 Homeodomain PapJ PF14855.6 NODE_22515_length_906_cov_70.743972_g17410_i0forward_frame_2 - 0.039 13.6 0.0 0.06 13.0 0.0 1.2 1 0 0 1 1 1 0 Pilus-assembly fibrillin subunit, chaperone Vta1 PF04652.16 NODE_22512_length_906_cov_81.807118_g17407_i0reverse_frame_2 - 0.025 14.5 0.5 0.1 12.6 0.0 2.0 2 0 0 2 2 2 0 Vta1 like Chloroa_b-bind PF00504.21 NODE_22500_length_906_cov_367.808266_g17395_i0forward_frame_2 - 2.6e-61 206.9 0.3 1e-29 104.1 0.0 2.0 2 0 0 2 2 2 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 NODE_22500_length_906_cov_367.808266_g17395_i0forward_frame_2 - 0.061 13.6 0.0 4.2 7.6 0.0 3.2 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal 2OG-FeII_Oxy_3 PF13640.6 ORF95070 - 2.6e-11 44.3 0.0 7.2e-11 42.8 0.0 1.8 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF95070 - 0.13 12.8 0.0 0.22 12.0 0.0 1.4 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Fer2_3 PF13085.6 ORF94802 - 6e-28 97.0 0.0 1.3e-27 95.9 0.0 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 ORF94802 - 5.9e-10 39.5 3.5 5.9e-10 39.5 3.5 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF94802 - 5.7e-07 29.9 9.3 0.0064 16.9 8.3 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF94802 - 4.5e-06 26.7 2.6 4.5e-06 26.7 2.6 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer2 PF00111.27 ORF94802 - 0.016 15.1 1.0 0.016 15.1 1.0 2.6 3 0 0 3 3 3 0 2Fe-2S iron-sulfur cluster binding domain Fer4_18 PF13746.6 ORF94802 - 0.033 14.4 9.0 0.31 11.3 0.3 2.6 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF94802 - 0.074 13.7 12.7 0.12 13.0 9.7 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF94802 - 0.33 11.1 10.5 0.27 11.4 6.8 2.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF94802 - 1.4 9.9 10.9 0.48 11.4 1.9 3.0 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain G-patch PF01585.23 ORF89995 - 1e-13 51.0 1.7 1.8e-13 50.1 1.7 1.4 1 0 0 1 1 1 1 G-patch domain RRM_1 PF00076.22 ORF89995 - 3.7e-05 23.5 0.1 7.1e-05 22.5 0.1 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) G-patch_2 PF12656.7 ORF89995 - 0.00021 21.3 1.9 0.0005 20.1 1.5 1.9 1 1 0 1 1 1 1 G-patch domain RBM39linker PF15519.6 ORF89995 - 4.5 8.4 10.4 71 4.6 4.9 3.2 2 1 0 2 2 2 0 linker between RRM2 and RRM3 domains in RBM39 protein TPR_12 PF13424.6 ORF88982 - 1.9e-08 34.5 6.9 7.1e-05 23.0 0.7 3.1 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF88982 - 1.8e-06 27.6 9.9 0.12 12.5 0.9 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF88982 - 1.9e-05 24.5 4.8 2.2 8.7 0.2 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF88982 - 3.5e-05 23.4 1.0 8.3 6.4 0.2 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat SNAP PF14938.6 ORF88982 - 0.002 17.6 2.9 0.085 12.3 4.7 2.2 1 1 1 2 2 2 1 Soluble NSF attachment protein, SNAP TPR_10 PF13374.6 ORF88982 - 0.0024 17.7 6.7 0.25 11.3 0.3 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF88982 - 0.0029 17.5 0.5 35 4.8 0.0 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF88982 - 0.0054 17.2 4.3 0.81 10.2 0.3 3.6 2 1 2 4 4 3 2 Tetratricopeptide repeat DUF4810 PF16068.5 ORF88982 - 0.0055 17.2 1.7 2.3 8.8 0.0 3.4 1 1 3 4 4 4 1 Domain of unknown function (DUF4810) TPR_6 PF13174.6 ORF88982 - 0.0093 16.5 6.8 27 5.7 0.1 5.2 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF88982 - 0.012 16.4 8.0 5.5 8.1 0.0 4.6 3 2 1 4 4 4 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF88982 - 0.035 14.5 0.0 16 6.1 0.0 3.1 3 0 0 3 3 2 0 Tetratricopeptide repeat DUF3600 PF12207.8 ORF88982 - 0.074 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3600) TPR_16 PF13432.6 ORF88982 - 0.22 12.2 10.6 1.1 10.0 0.6 3.8 2 2 2 4 4 4 0 Tetratricopeptide repeat Copine PF07002.16 ORF87934 - 1.4e-44 152.2 0.1 1.7e-44 151.9 0.1 1.1 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF87934 - 1.2e-05 25.5 0.1 1.8e-05 24.9 0.1 1.4 1 0 0 1 1 1 1 vWA found in TerF C terminus TauD PF02668.16 ORF85195 - 5.3e-21 75.6 1.6 6.9e-21 75.2 1.6 1.1 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family UvrD-helicase PF00580.21 ORF84398 - 0.00014 21.6 5.5 0.00018 21.2 5.5 1.1 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain DUF4472 PF14739.6 ORF8437 - 0.084 13.6 2.2 0.34 11.7 0.7 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4472) BCS1_N PF08740.11 ORF8437 - 0.24 11.3 3.2 0.78 9.7 0.2 2.3 1 1 1 2 2 2 0 BCS1 N terminal APG6_N PF17675.1 ORF8437 - 0.62 10.6 4.8 1.6 9.2 4.8 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region TPR_MLP1_2 PF07926.12 ORF8437 - 0.81 9.7 5.6 0.3 11.2 2.5 1.9 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein DAP3 PF10236.9 ORF84352 - 6.4e-28 97.8 0.0 4.8e-27 95.0 0.0 2.1 1 1 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 DUF815 PF05673.13 ORF84352 - 0.0033 16.6 0.0 0.0067 15.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 ORF84352 - 0.0075 16.5 0.1 0.063 13.5 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.7 ORF84352 - 0.044 12.7 0.0 0.059 12.3 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain AAA-ATPase_like PF09820.9 ORF84352 - 0.07 12.5 0.6 0.15 11.4 0.1 1.7 2 0 0 2 2 2 0 Predicted AAA-ATPase AAA_29 PF13555.6 ORF84352 - 0.084 12.6 0.0 0.72 9.6 0.0 2.1 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF84352 - 0.2 12.0 0.1 1.2 9.5 0.1 2.0 1 1 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.6 ORF84352 - 0.21 11.9 0.0 24 5.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain ATP-synt PF00231.19 ORF80737 - 1.2e-68 231.9 2.1 1.3e-68 231.8 2.1 1.0 1 0 0 1 1 1 1 ATP synthase MAP65_ASE1 PF03999.12 ORF80737 - 0.0089 14.8 0.6 0.015 14.0 0.6 1.3 1 0 0 1 1 1 1 Microtubule associated protein (MAP65/ASE1 family) G-patch PF01585.23 ORF79312 - 1e-13 51.0 1.7 1.8e-13 50.1 1.7 1.4 1 0 0 1 1 1 1 G-patch domain RRM_1 PF00076.22 ORF79312 - 3.7e-05 23.5 0.1 7.1e-05 22.5 0.1 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) G-patch_2 PF12656.7 ORF79312 - 0.00021 21.3 1.9 0.0005 20.1 1.5 1.9 1 1 0 1 1 1 1 G-patch domain RBM39linker PF15519.6 ORF79312 - 4.5 8.4 10.4 71 4.6 4.9 3.2 2 1 0 2 2 2 0 linker between RRM2 and RRM3 domains in RBM39 protein Pribosyl_synth PF14572.6 ORF79047 - 2.7e-09 37.3 0.1 6.1e-09 36.2 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 ORF79047 - 4.8e-06 26.2 0.0 1.3e-05 24.7 0.0 1.6 1 1 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyltran_N PF13793.6 ORF79047 - 0.05 13.5 0.1 2.3 8.2 0.1 2.8 2 1 0 2 2 2 0 N-terminal domain of ribose phosphate pyrophosphokinase AP_endonuc_2 PF01261.24 ORF79047 - 0.063 12.7 0.0 0.098 12.1 0.0 1.2 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel PRTase_2 PF15609.6 ORF79047 - 0.075 12.5 0.0 0.23 10.9 0.0 1.8 2 0 0 2 2 2 0 Phosphoribosyl transferase DUF4116 PF13475.6 ORF76749 - 3e-31 106.9 0.0 6.7e-11 41.8 0.0 5.4 5 1 0 5 5 5 5 Domain of unknown function (DUF4116) Ribosomal_L30 PF00327.20 ORF75358 - 0.0016 18.3 1.6 0.004 17.0 0.0 2.3 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e Eapp_C PF10238.9 ORF75358 - 6.9 6.7 11.1 19 5.3 9.9 2.3 1 1 0 1 1 1 0 E2F-associated phosphoprotein DUF2732 PF10809.8 ORF7484 - 0.43 10.5 3.3 0.35 10.8 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2732) COPIIcoated_ERV PF07970.12 ORF74713 - 3.3e-51 174.2 0.1 5.1e-51 173.6 0.1 1.3 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter DUF3330 PF11809.8 ORF74713 - 0.05 13.7 0.5 0.13 12.4 0.5 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3330) MCM_OB PF17207.3 ORF74713 - 0.083 12.7 0.5 14 5.6 0.2 2.2 2 0 0 2 2 2 0 MCM OB domain TPR_9 PF13371.6 ORF72966 - 2.3e-05 24.5 0.1 5.4e-05 23.3 0.1 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF72966 - 0.00019 21.1 0.6 0.078 12.8 0.1 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF72966 - 0.00059 19.7 5.0 0.0037 17.3 0.3 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF72966 - 0.054 14.0 0.4 1.2 9.7 0.0 2.7 2 1 0 2 2 2 0 Tetratricopeptide repeat MetallophosC PF16370.5 ORF72966 - 0.19 12.0 0.5 0.31 11.3 0.5 1.3 1 0 0 1 1 1 0 C terminal of Calcineurin-like phosphoesterase TPR_14 PF13428.6 ORF72966 - 0.3 12.0 1.2 4.4 8.4 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF72966 - 0.38 11.1 3.7 4.8 7.5 0.2 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat WD40 PF00400.32 ORF72895 - 1.1e-08 35.5 0.1 0.024 15.5 0.0 4.4 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF72895 - 0.0023 18.2 0.0 0.12 12.6 0.0 3.2 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF72895 - 0.014 15.2 0.1 0.023 14.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) PhoLip_ATPase_C PF16212.5 ORF71470 - 5.6e-70 235.9 32.8 6.4e-70 235.7 32.8 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal PPR_2 PF13041.6 ORF68679 - 5.6e-11 42.5 0.0 0.00099 19.3 0.0 4.9 3 2 3 6 6 6 3 PPR repeat family PPR_3 PF13812.6 ORF68679 - 4.8e-09 36.2 0.0 0.0022 18.0 0.0 4.4 3 1 1 4 4 4 3 Pentatricopeptide repeat domain PPR PF01535.20 ORF68679 - 9e-08 31.9 5.7 0.012 15.8 0.0 5.6 6 0 0 6 6 6 2 PPR repeat PPR_1 PF12854.7 ORF68679 - 5.8e-05 22.7 0.2 2.7 7.8 0.0 4.3 5 0 0 5 5 5 2 PPR repeat PPR_long PF17177.4 ORF68679 - 0.0002 20.8 0.0 0.1 12.0 0.0 2.4 2 0 0 2 2 2 2 Pentacotripeptide-repeat region of PRORP WD40 PF00400.32 ORF67902 - 1.1e-08 35.5 0.1 0.024 15.5 0.0 4.4 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF67902 - 0.0023 18.2 0.0 0.12 12.6 0.0 3.2 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF67902 - 0.014 15.2 0.1 0.023 14.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) YabA PF06156.13 ORF63397 - 1.7 9.3 6.3 2.3 8.9 0.8 2.7 2 2 0 2 2 2 0 Initiation control protein YabA Zeta_toxin PF06414.12 ORF63377 - 0.028 13.7 0.0 0.055 12.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 ORF63377 - 0.11 12.9 0.0 0.22 11.9 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain MoCF_biosynth PF00994.24 ORF6301 - 4.5e-05 23.1 0.0 0.0011 18.7 0.0 2.2 2 0 0 2 2 2 1 Probable molybdopterin binding domain CinA_KH PF18146.1 ORF6301 - 0.00022 21.3 0.0 0.0005 20.2 0.0 1.5 1 0 0 1 1 1 1 Damage-inducible protein CinA KH domain CinA PF02464.17 ORF6301 - 0.0015 18.1 0.2 0.26 10.8 0.0 2.4 2 0 0 2 2 2 2 Competence-damaged protein ABC_tran PF00005.27 ORF59902 - 9.9e-10 39.1 0.6 2.2e-09 37.9 0.2 1.8 2 0 0 2 2 2 1 ABC transporter Chromo PF00385.24 ORF59902 - 2.5e-08 33.7 0.3 6.1e-08 32.5 0.3 1.7 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain AAA_21 PF13304.6 ORF59902 - 0.014 15.3 0.1 0.048 13.5 0.0 1.7 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Glyco_hydro_2 PF00703.21 ORF59902 - 0.015 16.0 0.4 0.035 14.8 0.4 1.6 1 0 0 1 1 1 0 Glycosyl hydrolases family 2 SbcCD_C PF13558.6 ORF59902 - 0.085 13.1 0.0 0.54 10.5 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit WD40 PF00400.32 ORF59452 - 1.1e-08 35.5 0.1 0.024 15.5 0.0 4.4 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF59452 - 0.0023 18.2 0.0 0.12 12.6 0.0 3.2 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF59452 - 0.014 15.2 0.1 0.023 14.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) TPR_14 PF13428.6 ORF55654 - 2.4e-11 43.5 0.1 0.01 16.6 0.0 4.7 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF55654 - 3.6e-11 42.3 10.8 0.12 12.5 0.0 5.8 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF55654 - 2e-10 40.0 7.3 0.012 15.4 0.0 6.2 6 1 0 6 6 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF55654 - 1.4e-09 38.0 1.0 0.0012 19.0 0.0 3.3 3 0 0 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 ORF55654 - 1e-07 31.9 0.6 0.078 13.4 0.0 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF55654 - 3.5e-07 29.8 1.8 0.24 11.1 0.1 4.2 3 1 0 3 3 3 3 TPR repeat TPR_16 PF13432.6 ORF55654 - 3.7e-07 30.7 0.2 0.00018 22.1 0.0 3.5 3 2 2 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF55654 - 5.6e-07 30.0 0.2 0.068 13.7 0.0 4.1 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF55654 - 1.5e-05 24.8 10.2 0.25 11.7 0.0 5.7 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF55654 - 2.2e-05 24.6 2.0 0.049 13.9 0.2 4.0 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF55654 - 5e-05 23.0 6.2 0.15 12.1 0.0 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat DUF4919 PF16266.5 ORF55654 - 0.014 15.4 0.2 0.026 14.5 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4919) TPR_10 PF13374.6 ORF55654 - 0.21 11.5 3.3 12 5.9 0.1 4.2 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF55654 - 0.31 11.8 3.9 7.6 7.4 0.0 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat Steroid_dh PF02544.16 ORF54620 - 2.4e-37 128.2 8.5 4.9e-37 127.2 8.5 1.5 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ubiquitin PF00240.23 ORF54620 - 9.1e-05 22.1 0.2 0.00018 21.2 0.2 1.5 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF54620 - 0.019 14.8 1.0 0.068 13.0 1.0 1.8 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like YukD PF08817.10 ORF54620 - 0.019 15.6 0.0 0.029 15.1 0.0 1.3 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD PI-TkoII_IV PF18714.1 ORF54620 - 0.026 14.0 0.3 0.05 13.1 0.3 1.4 1 0 0 1 1 1 0 DNA polymerase II intein Domain IV UN_NPL4 PF11543.8 ORF54620 - 0.044 14.3 0.1 0.075 13.5 0.1 1.3 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Ubiquitin_4 PF18036.1 ORF54620 - 0.12 12.4 1.0 1.3 9.1 0.5 2.6 2 1 0 2 2 2 0 Ubiquitin-like domain PDR_assoc PF08370.11 ORF54620 - 0.19 11.5 0.2 0.19 11.5 0.2 3.0 3 0 0 3 3 3 0 Plant PDR ABC transporter associated Zeta_toxin PF06414.12 ORF53464 - 0.026 13.8 0.0 0.055 12.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 ORF53464 - 0.1 12.9 0.0 0.2 12.0 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain DHC_N2 PF08393.13 ORF53008 - 1.3e-108 363.7 2.1 1.4e-108 363.5 2.1 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 THP2 PF09432.10 ORF53008 - 0.11 12.6 1.4 0.19 11.8 0.9 1.7 1 1 0 1 1 1 0 Tho complex subunit THP2 SKA2 PF16740.5 ORF53008 - 0.12 12.1 0.3 0.35 10.7 0.3 1.7 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 TPR_MLP1_2 PF07926.12 ORF48453 - 0.011 15.8 3.3 0.011 15.8 3.3 2.0 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF2229 PF09989.9 ORF48453 - 0.19 11.3 0.6 0.35 10.5 0.6 1.4 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) DUF2937 PF11157.8 ORF48453 - 0.44 10.3 4.1 0.5 10.1 1.1 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2937) Lectin_N PF03954.14 ORF48453 - 0.52 10.0 2.9 4.4 7.1 0.5 2.3 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain Helicase_C PF00271.31 ORF45655 - 1.2e-27 96.5 0.0 1.7e-27 95.9 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SAP PF02037.27 ORF45655 - 2.3e-07 30.4 1.5 5.2e-07 29.3 0.0 2.4 3 0 0 3 3 3 1 SAP domain NYN_YacP PF05991.11 ORF45455 - 0.095 12.6 0.1 0.17 11.8 0.1 1.4 1 1 0 1 1 1 0 YacP-like NYN domain PanZ PF12568.8 ORF45244 - 0.052 13.3 0.6 0.13 12.0 0.2 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain, PanZ Calpain_inhib PF00748.19 ORF45244 - 6.5 7.3 7.5 9.5 6.7 0.7 2.3 2 0 0 2 2 2 0 Calpain inhibitor TPR_2 PF07719.17 ORF38746 - 1.9e-09 36.9 0.2 0.0002 21.2 0.0 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF38746 - 2e-09 37.4 0.0 0.041 14.7 0.0 5.2 2 1 4 6 6 4 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF38746 - 3.3e-09 37.1 0.1 3.8e-05 24.1 0.0 4.1 3 1 2 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF38746 - 2.7e-07 30.1 0.0 0.038 13.8 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF38746 - 3.7e-07 30.0 0.0 0.008 16.5 0.0 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_15 PF13429.6 ORF38746 - 5.4e-06 25.8 0.0 1.1e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF38746 - 2.6e-05 24.1 4.1 0.038 14.2 0.0 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF38746 - 5.5e-05 23.2 0.0 0.0026 17.8 0.0 3.0 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF38746 - 0.00038 20.3 0.0 2.3 8.5 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF38746 - 0.00079 19.9 0.4 3.9 8.3 0.0 5.0 6 0 0 6 6 5 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF38746 - 0.0023 18.2 1.2 4.6 7.6 0.0 3.6 2 1 1 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF38746 - 0.0026 17.9 0.5 0.059 13.6 0.2 2.5 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 PPR PF01535.20 ORF38746 - 0.0049 17.0 0.2 26 5.4 0.0 4.2 4 0 0 4 4 4 0 PPR repeat Coatomer_E PF04733.14 ORF38746 - 0.037 13.4 0.0 0.062 12.7 0.0 1.4 1 0 0 1 1 1 0 Coatomer epsilon subunit TPPII_N PF12583.8 ORF38746 - 0.12 12.9 0.0 0.25 11.9 0.0 1.5 1 0 0 1 1 1 0 Tripeptidyl peptidase II N terminal Taxilin PF09728.9 ORF36289 - 3.1e-05 23.3 56.3 4.2e-05 22.9 56.3 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein KH_2 PF07650.17 ORF36289 - 0.014 15.2 1.0 0.014 15.2 1.0 3.6 2 2 1 3 3 3 0 KH domain HALZ PF02183.18 ORF36289 - 0.027 14.7 4.8 0.027 14.7 4.8 4.2 4 0 0 4 4 4 0 Homeobox associated leucine zipper KH_1 PF00013.29 ORF36289 - 0.11 12.4 1.8 0.19 11.6 0.1 2.4 2 1 0 2 2 2 0 KH domain Mod_r PF07200.13 ORF36289 - 0.76 9.9 48.3 1.3 9.1 4.8 4.3 1 1 3 4 4 4 0 Modifier of rudimentary (Mod(r)) protein PI3K_P85_iSH2 PF16454.5 ORF36289 - 1.1 8.9 47.0 20 4.7 30.6 3.4 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4407 PF14362.6 ORF36289 - 2.9 7.2 31.8 0.087 12.2 22.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) YabA PF06156.13 ORF36216 - 1.7 9.3 6.3 2.3 8.9 0.8 2.7 2 2 0 2 2 2 0 Initiation control protein YabA Ldh_2 PF02615.14 ORF35277 - 5.3e-95 318.4 0.0 5.8e-95 318.2 0.0 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase TIR_2 PF13676.6 ORF34764 - 0.066 13.8 0.0 0.22 12.1 0.0 1.9 1 1 0 1 1 1 0 TIR domain HET PF06985.11 ORF34764 - 0.093 13.1 0.3 0.36 11.2 0.2 2.0 2 0 0 2 2 2 0 Heterokaryon incompatibility protein (HET) SIS PF01380.22 ORF33609 - 1e-60 203.3 0.0 1.3e-31 109.2 0.0 2.1 2 0 0 2 2 2 2 SIS domain 2OG-FeII_Oxy_3 PF13640.6 ORF32203 - 4.9e-18 65.8 1.2 8.4e-18 65.1 0.0 2.0 3 0 0 3 3 3 1 2OG-Fe(II) oxygenase superfamily EamA PF00892.20 ORF31622 - 9.2e-49 165.1 42.2 7.2e-26 91.0 15.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 ORF31622 - 0.00036 20.0 11.2 0.0014 18.0 7.0 2.1 1 1 1 2 2 2 2 Triose-phosphate Transporter family DUF3119 PF11317.8 ORF31622 - 1.9 8.8 6.7 0.15 12.3 1.6 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3119) Mito_carr PF00153.27 ORF31027 - 7.8e-45 150.7 6.7 1.2e-15 57.1 0.1 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein PP-binding PF00550.25 ORF30950 - 5e-05 23.6 0.0 0.0001 22.6 0.0 1.5 1 0 0 1 1 1 1 Phosphopantetheine attachment site Phage_term_smal PF05944.12 ORF30950 - 0.032 14.2 0.5 0.075 13.0 0.5 1.7 1 1 0 1 1 1 0 Phage small terminase subunit TPR_8 PF13181.6 ORF30950 - 0.15 12.4 1.8 0.62 10.4 0.0 2.8 3 1 0 3 3 3 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF30950 - 1.3 9.2 4.2 10 6.3 2.7 2.5 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 5 Arc_C PF18162.1 ORF3052 - 0.12 12.3 0.0 1.1 9.1 0.0 2.1 1 1 0 2 2 2 0 Arc C-lobe SET PF00856.28 ORF30337 - 0.00038 20.9 0.0 0.00056 20.3 0.0 1.3 1 0 0 1 1 1 1 SET domain RRM_1 PF00076.22 ORF29695 - 9.1e-05 22.2 0.0 0.00018 21.3 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Tagatose_6_P_K PF08013.11 ORF29695 - 0.083 11.6 0.1 0.11 11.1 0.1 1.1 1 0 0 1 1 1 0 Tagatose 6 phosphate kinase Tubulin_C PF03953.17 ORF29403 - 1.7e-51 173.6 0.9 1.9e-51 173.5 0.2 1.5 2 0 0 2 2 2 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF29403 - 3.7e-11 43.6 0.0 5.8e-11 42.9 0.0 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain PhyH PF05721.13 ORF21128 - 1.7e-08 35.0 0.2 3.3e-07 30.8 0.0 2.1 2 0 0 2 2 2 1 Phytanoyl-CoA dioxygenase (PhyH) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks51.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks51.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks51.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks51.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:12:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4570 PF15134.6 ORF18816 - 0.003 17.5 8.4 0.003 17.5 8.4 2.2 2 1 1 3 3 3 1 Domain of unknown function (DUF4570) DUF3552 PF12072.8 ORF18816 - 0.013 15.0 17.9 0.013 15.0 17.9 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) MS_channel PF00924.18 ORF18816 - 0.092 12.3 0.2 0.19 11.2 0.0 1.6 2 0 0 2 2 2 0 Mechanosensitive ion channel AAA_23 PF13476.6 ORF18816 - 1.4 9.4 16.0 0.21 12.1 5.5 2.2 2 0 0 2 2 2 0 AAA domain UPF0242 PF06785.11 ORF18816 - 2 8.5 24.7 0.23 11.5 9.4 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Calc_CGRP_IAPP PF00214.19 ORF18816 - 6.7 7.1 10.1 0.3 11.4 2.1 2.5 2 1 0 2 2 2 0 Calcitonin / CGRP / IAPP family HTH_1 PF00126.27 ORF1815 - 7.3e-16 57.9 0.0 1.4e-15 57.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 ORF1815 - 3.6e-10 39.6 0.0 4.9e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 ORF1815 - 0.061 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain WD40 PF00400.32 ORF1164 - 1.1e-08 35.5 0.1 0.024 15.5 0.0 4.4 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF1164 - 0.0023 18.2 0.0 0.12 12.6 0.0 3.2 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF1164 - 0.014 15.2 0.1 0.023 14.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) Dickkopf_N PF04706.12 ORF11491 - 5.3e-06 26.8 9.6 5.3e-06 26.8 9.6 3.4 2 2 1 3 3 3 2 Dickkopf N-terminal cysteine-rich region FlgI PF02119.16 ORF109643 - 6.1e-113 377.2 11.0 6.8e-113 377.1 11.0 1.0 1 0 0 1 1 1 1 Flagellar P-ring protein DUF3869 PF12985.7 ORF109643 - 0.38 11.1 3.8 0.28 11.6 0.7 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF3869) WD40 PF00400.32 ORF109243 - 1.1e-08 35.5 0.1 0.024 15.5 0.0 4.4 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF109243 - 0.0023 18.2 0.0 0.12 12.6 0.0 3.2 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF109243 - 0.014 15.2 0.1 0.023 14.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) PS_Dcarbxylase PF02666.15 ORF103919 - 4.1e-58 196.2 0.0 4.8e-58 196.0 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase DUF2198 PF09964.9 NODE_22761_length_899_cov_11.364583_g17622_i0forward_frame_1 - 0.048 13.7 1.6 0.16 12.0 1.6 2.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2198) RCC1_2 PF13540.6 NODE_22743_length_899_cov_363.284722_g17607_i0reverse_frame_1 - 1e-19 69.8 2.7 0.0048 16.7 0.0 6.3 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_22743_length_899_cov_363.284722_g17607_i0reverse_frame_1 - 0.012 16.0 0.0 39 4.8 0.0 4.0 5 0 0 5 5 5 0 Spectrin repeat DDE_Tnp_1_3 PF13612.6 NODE_22743_length_899_cov_363.284722_g17607_i0reverse_frame_1 - 0.24 11.4 1.7 30 4.6 0.0 3.1 5 0 0 5 5 5 0 Transposase DDE domain DUF445 PF04286.12 NODE_22733_length_900_cov_56.547977_g17602_i0reverse_frame_1 - 0.019 14.8 9.5 0.025 14.4 9.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF445) ATP-grasp_3 PF02655.14 NODE_22719_length_900_cov_160.467052_g17588_i0forward_frame_1 - 8.1e-07 29.2 0.0 0.00024 21.2 0.0 2.2 2 0 0 2 2 2 2 ATP-grasp domain CPSase_L_D2 PF02786.17 NODE_22719_length_900_cov_160.467052_g17588_i0forward_frame_1 - 0.00065 19.3 0.1 0.0032 17.0 0.0 2.0 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 NODE_22719_length_900_cov_160.467052_g17588_i0forward_frame_1 - 0.0096 15.5 0.0 0.016 14.8 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Meckelin PF09773.9 NODE_22719_length_900_cov_160.467052_g17588_i0forward_frame_1 - 0.14 10.2 0.0 0.18 9.8 0.0 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) Pyr_redox_3 PF13738.6 NODE_22690_length_901_cov_185.146651_g17562_i0forward_frame_2 - 9.8e-09 34.9 0.0 1.7e-08 34.1 0.0 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 NODE_22690_length_901_cov_185.146651_g17562_i0forward_frame_2 - 1.6e-06 27.5 0.0 2.5e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 NODE_22690_length_901_cov_185.146651_g17562_i0forward_frame_2 - 7.7e-05 22.1 0.0 0.00016 21.0 0.0 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase VATC PF18716.1 NODE_22665_length_902_cov_54.492503_g17543_i0forward_frame_2 - 2 8.3 9.9 0.051 13.4 2.5 2.1 2 1 0 2 2 2 0 Vms1-associating treble clef domain Peptidase_S46 PF10459.9 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 0.00055 18.7 13.6 0.00073 18.3 13.6 1.1 1 0 0 1 1 1 1 Peptidase S46 Pannexin_like PF12534.8 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 0.0038 16.4 6.8 0.005 16.0 6.8 1.3 1 0 0 1 1 1 1 Pannexin-like TM region of LRRC8 AHSP PF09236.10 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 0.053 14.0 0.8 0.053 14.0 0.8 3.0 2 1 1 3 3 3 0 Alpha-haemoglobin stabilising protein DUF885 PF05960.11 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 0.071 12.8 3.3 0.11 12.2 3.3 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) DUF3584 PF12128.8 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 0.086 10.4 20.8 0.11 10.0 20.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Lebercilin PF15619.6 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 0.11 12.1 26.9 0.021 14.5 22.8 1.7 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease DHR10 PF18595.1 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 0.16 12.1 19.2 0.3 11.1 19.2 1.4 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain RP-C_C PF11800.8 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 0.22 11.6 5.1 0.32 11.1 5.1 1.3 1 0 0 1 1 1 0 Replication protein C C-terminal region UBN_AB PF14075.6 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 1.2 8.8 16.5 0.73 9.5 14.7 1.6 2 0 0 2 2 2 0 Ubinuclein conserved middle domain ALMT PF11744.8 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 1.3 7.7 10.6 1.8 7.3 10.6 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter TPR_MLP1_2 PF07926.12 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 3 7.9 26.5 0.2 11.8 21.7 1.5 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein Exonuc_VII_L PF02601.15 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 3.1 7.3 14.7 4.5 6.7 14.7 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit HSP70 PF00012.20 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 3.5 5.7 11.9 4.6 5.3 11.9 1.1 1 0 0 1 1 1 0 Hsp70 protein DUF4407 PF14362.6 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 4.2 6.6 13.8 5.7 6.2 13.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Atg14 PF10186.9 NODE_22664_length_902_cov_77.418685_g12541_i1forward_frame_3 - 8.5 5.4 16.5 11 5.0 16.5 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2971 PF11185.8 NODE_22663_length_902_cov_85.945790_g17542_i0forward_frame_3 - 3.2 9.0 5.9 5.4 8.2 3.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2971) GCK PF07802.11 NODE_22625_length_903_cov_71.584101_g17510_i0reverse_frame_3 - 0.04 14.3 0.1 0.1 13.1 0.0 1.7 2 0 0 2 2 2 0 GCK domain Herpes_BTRF1 PF04682.12 NODE_22625_length_903_cov_71.584101_g17510_i0forward_frame_2 - 0.033 13.5 0.0 0.053 12.9 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus BTRF1 protein conserved region PMSR PF01625.21 ORF98135 - 1e-06 29.0 1.0 1.8e-06 28.2 1.0 1.5 1 1 0 1 1 1 1 Peptide methionine sulfoxide reductase Sugarporin_N PF11471.8 ORF98077 - 0.0098 15.8 1.9 5.9 6.9 0.6 3.0 3 0 0 3 3 3 2 Maltoporin periplasmic N-terminal extension Rab5-bind PF09311.11 ORF98077 - 0.046 13.1 16.5 0.39 10.1 6.1 2.1 1 1 1 2 2 2 0 Rabaptin-like protein CtIP_N PF10482.9 ORF98077 - 0.062 13.3 0.6 0.062 13.3 0.6 2.6 2 1 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain IL2 PF00715.17 ORF98077 - 0.42 10.5 3.4 2.5 8.0 1.5 2.5 1 1 1 2 2 2 0 Interleukin 2 Baculo_PEP_C PF04513.12 ORF98077 - 0.62 10.1 4.9 14 5.7 0.1 2.4 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Gly_acyl_tr_N PF06021.11 ORF98077 - 0.7 10.0 4.5 1.2 9.2 4.5 1.5 1 1 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase Tweety PF04906.13 ORF98077 - 0.76 8.4 3.5 0.7 8.5 1.0 2.0 1 1 1 2 2 2 0 Tweety Flagellin_N PF00669.20 ORF98077 - 0.85 9.7 7.1 0.42 10.7 2.2 2.4 1 1 1 2 2 2 0 Bacterial flagellin N-terminal helical region DUF948 PF06103.11 ORF98077 - 1.7 9.0 3.4 16 5.8 0.2 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Prominin PF05478.11 ORF98077 - 2 6.2 6.2 3.8 5.3 6.1 1.5 1 1 0 1 1 1 0 Prominin Peptidase_S46 PF10459.9 ORF98077 - 3.9 6.0 10.2 5.1 5.6 10.2 1.0 1 0 0 1 1 1 0 Peptidase S46 V_ATPase_I PF01496.19 ORF98077 - 4.2 5.2 8.5 3.6 5.4 6.9 1.5 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Spc24 PF08286.11 ORF98077 - 5.8 7.2 10.2 2.6 8.3 2.3 2.6 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 GAS PF13851.6 ORF98077 - 5.9 6.2 17.1 6.2 6.1 5.1 2.3 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF98077 - 8.2 3.8 19.3 20 2.5 18.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) PP2C PF00481.21 ORF96565 - 9.4e-46 156.5 0.0 1.3e-45 156.1 0.0 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF96565 - 0.0031 17.4 0.0 1.5 8.7 0.0 2.2 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) LRR_6 PF13516.6 ORF95959 - 9.2e-05 22.2 13.7 0.00088 19.1 0.4 3.9 5 0 0 5 5 5 2 Leucine Rich repeat LRR_8 PF13855.6 ORF95959 - 0.0034 17.1 10.2 1.7 8.5 0.1 3.8 4 0 0 4 4 4 3 Leucine rich repeat LRR_4 PF12799.7 ORF95959 - 0.0047 17.3 8.4 0.099 13.1 0.5 3.9 2 2 1 3 3 3 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF95959 - 0.011 16.2 0.5 2.6 8.9 0.1 3.7 2 0 0 2 2 2 0 Leucine Rich Repeat Peripla_BP_2 PF01497.18 ORF94025 - 9.6e-30 103.9 0.3 1.1e-29 103.7 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Transposase_31 PF04754.12 ORF9372 - 6.4e-86 287.2 0.6 8.4e-86 286.8 0.6 1.1 1 0 0 1 1 1 1 Putative transposase, YhgA-like DUF2802 PF10975.8 ORF9372 - 0.0031 17.6 0.1 0.0081 16.3 0.1 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2802) HTH_7 PF02796.15 ORF9372 - 0.093 12.8 0.1 7.9 6.7 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_3 PF01381.22 ORF9372 - 0.15 12.1 0.0 0.52 10.4 0.0 1.9 1 1 0 1 1 1 0 Helix-turn-helix DDE_Tnp_IS1595 PF12762.7 ORF92020 - 0.2 11.7 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 ISXO2-like transposase domain Cation_efflux PF01545.21 ORF90864 - 1.8e-44 151.9 14.6 2.1e-44 151.6 14.6 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 ORF90864 - 1.3e-26 92.5 0.1 2e-26 91.9 0.1 1.2 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter AveC_like PF17198.4 ORF90864 - 0.024 14.1 0.9 0.041 13.3 0.9 1.4 1 0 0 1 1 1 0 Spirocyclase AveC-like DUF1129 PF06570.11 ORF90864 - 0.04 13.4 0.2 0.04 13.4 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) DUF2207 PF09972.9 ORF90864 - 5.1 5.7 7.2 6.9 5.3 5.6 1.8 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) UCH PF00443.29 ORF88789 - 1e-26 94.0 0.0 1.1e-26 93.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF88789 - 8.9e-11 41.9 0.0 1.1e-10 41.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MFS_1 PF07690.16 ORF87610 - 7.1e-22 77.8 20.8 9.4e-19 67.5 6.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 ORF87610 - 0.0017 16.8 1.5 0.0017 16.8 1.5 1.4 2 0 0 2 2 2 1 Organic Anion Transporter Polypeptide (OATP) family Jacalin PF01419.17 ORF83779 - 2.7e-15 56.5 1.8 4.3e-08 33.2 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain V_ATPase_I PF01496.19 ORF8215 - 5.7e-81 272.6 4.1 6.6e-81 272.4 4.1 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family BBP1_N PF15271.6 ORF8215 - 0.023 15.5 0.5 0.039 14.8 0.5 1.3 1 0 0 1 1 1 0 Spindle pole body component BBP1, Mps2-binding protein MORN PF02493.20 ORF78352 - 1.7e-31 106.2 80.2 2.6e-09 36.4 2.3 9.0 10 0 0 10 10 10 7 MORN repeat DUF3048_C PF17479.2 ORF78352 - 5.2 7.5 18.5 3.3 8.1 1.5 4.3 1 1 4 5 5 5 0 Protein of unknown function (DUF3048) C-terminal domain BPD_transp_1 PF00528.22 ORF75587 - 6.5e-31 107.5 17.3 1.5e-30 106.3 12.8 2.2 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 ORF75587 - 1.1e-16 60.5 1.4 1.1e-16 60.5 1.4 4.1 4 0 0 4 4 4 2 N-terminal TM domain of oligopeptide transport permease C DUF624 PF04854.14 ORF75587 - 0.14 12.3 0.1 0.14 12.3 0.1 3.3 3 1 0 3 3 3 0 Protein of unknown function, DUF624 Thiolase_N PF00108.23 ORF71323 - 4.5e-53 180.3 0.8 6.1e-53 179.8 0.3 1.5 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF71323 - 2.2e-43 146.8 0.2 3.7e-43 146.1 0.2 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF71323 - 0.015 14.9 0.1 0.034 13.7 0.1 1.7 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain SURF1 PF02104.15 ORF70932 - 1e-34 120.3 0.1 1.4e-34 119.9 0.1 1.1 1 0 0 1 1 1 1 SURF1 family E1-E2_ATPase PF00122.20 ORF70821 - 0.00034 20.2 0.8 0.0007 19.2 0.0 1.9 3 0 0 3 3 3 1 E1-E2 ATPase HECT PF00632.25 ORF69535 - 3.1e-61 207.5 0.3 3.4e-61 207.4 0.3 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) PPR_3 PF13812.6 ORF69452 - 2.1e-28 98.2 0.0 1e-06 28.7 0.0 5.4 2 1 5 7 7 7 6 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF69452 - 3.9e-27 94.2 0.0 7.6e-05 22.8 0.0 5.6 1 1 4 6 6 6 6 PPR repeat family PPR PF01535.20 ORF69452 - 1.2e-14 53.4 2.2 0.031 14.5 0.0 6.8 7 0 0 7 7 7 3 PPR repeat PPR_long PF17177.4 ORF69452 - 2.5e-09 36.8 0.1 6.6e-07 28.9 0.1 2.2 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF69452 - 1.6e-07 30.9 0.0 0.25 11.1 0.0 6.0 7 1 0 7 7 7 1 PPR repeat Flu_B_NS1 PF02942.14 ORF69452 - 3.1e-06 26.5 0.1 0.071 12.2 0.0 4.5 1 1 5 6 6 6 1 Influenza B non-structural protein (NS1) ATP-grasp_4 PF13535.6 ORF69452 - 1.8e-05 24.4 0.2 0.93 9.1 0.0 5.1 1 1 6 7 7 7 1 ATP-grasp domain TPR_7 PF13176.6 ORF69452 - 0.0011 18.9 0.1 32 4.9 0.0 5.4 6 0 0 6 6 6 0 Tetratricopeptide repeat Clathrin PF00637.20 ORF69452 - 0.075 12.9 0.0 5.2 6.9 0.0 3.5 1 1 3 5 5 5 0 Region in Clathrin and VPS DUF3322 PF11795.8 ORF69452 - 0.5 10.4 2.6 2.4 8.1 0.3 2.6 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) Kunitz_legume PF00197.18 ORF69452 - 2.3 8.2 7.0 34 4.3 0.1 4.6 2 2 4 6 6 6 0 Trypsin and protease inhibitor ADP_ribosyl_GH PF03747.14 ORF69360 - 5.7e-45 154.3 0.0 6.9e-45 154.0 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase UPF0564 PF10595.9 ORF68811 - 4.8e-06 25.9 13.8 4.8e-06 25.9 13.8 2.2 1 1 1 2 2 2 2 Uncharacterised protein family UPF0564 Jacalin PF01419.17 ORF68573 - 2.7e-15 56.5 1.8 4.3e-08 33.2 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain Polysacc_synt PF01943.17 ORF66652 - 0.0008 18.9 1.0 0.0008 18.9 1.0 1.5 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein TIR_2 PF13676.6 ORF66652 - 0.0041 17.7 0.0 0.0081 16.8 0.0 1.4 1 0 0 1 1 1 1 TIR domain DNA_pol_E_B PF04042.16 ORF65792 - 2.3e-27 95.7 0.0 3.1e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B TM1586_NiRdase PF14512.6 ORF65792 - 0.015 14.9 0.0 5.7 6.4 0.0 2.1 2 0 0 2 2 2 0 Putative TM nitroreductase Cyclin_N PF00134.23 ORF65568 - 4e-23 81.5 0.8 7.9e-23 80.6 0.6 1.6 2 0 0 2 2 2 1 Cyclin, N-terminal domain PMSR PF01625.21 ORF63500 - 1e-06 29.0 1.0 1.8e-06 28.2 1.0 1.5 1 1 0 1 1 1 1 Peptide methionine sulfoxide reductase Methyltransf_21 PF05050.12 ORF59152 - 4.2e-11 43.2 0.0 5e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain RRM_2 PF04059.12 ORF56481 - 3.6e-16 59.2 0.0 5.5e-16 58.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF56481 - 3.2e-05 23.6 0.0 8.6e-05 22.3 0.0 1.8 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Smg4_UPF3 PF03467.15 ORF56481 - 0.057 13.4 0.1 0.088 12.8 0.1 1.3 1 0 0 1 1 1 0 Smg-4/UPF3 family PUL PF08324.11 ORF54476 - 0.0011 18.2 0.7 0.0032 16.8 0.2 1.8 1 1 1 2 2 2 1 PUL domain MORN PF02493.20 ORF52192 - 1.7e-31 106.2 80.2 2.6e-09 36.4 2.3 9.0 10 0 0 10 10 10 7 MORN repeat DUF3048_C PF17479.2 ORF52192 - 5.2 7.5 18.5 3.3 8.1 1.5 4.3 1 1 4 5 5 5 0 Protein of unknown function (DUF3048) C-terminal domain DAGAT PF03982.13 ORF50256 - 8e-34 116.9 0.0 9.8e-34 116.6 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol acyltransferase MFS_1 PF07690.16 ORF46362 - 2e-16 59.9 9.2 2.7e-16 59.5 9.2 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Sterol-sensing PF12349.8 ORF36920 - 1.4e-50 171.1 5.3 2.7e-50 170.2 5.3 1.5 1 0 0 1 1 1 1 Sterol-sensing domain of SREBP cleavage-activation Patched PF02460.18 ORF36920 - 4.4e-41 140.9 0.5 5.4e-41 140.6 0.5 1.1 1 0 0 1 1 1 1 Patched family MMPL PF03176.15 ORF36920 - 7.1e-13 48.2 0.7 1.1e-12 47.6 0.7 1.2 1 0 0 1 1 1 1 MMPL family DUF3997 PF13162.6 ORF36920 - 0.0085 16.4 0.0 4.6 7.6 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF3997) DUF5079 PF16882.5 ORF36920 - 0.015 15.2 2.5 0.015 15.2 2.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5079) PMP22_Claudin PF00822.20 ORF36920 - 0.068 13.0 0.5 8.3 6.3 0.0 2.4 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin family DUF3043 PF11241.8 ORF36920 - 0.85 9.6 3.3 0.45 10.5 0.9 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3043) NYD-SP28 PF14772.6 ORF29147 - 1.2e-13 51.0 16.7 1.2e-13 51.0 16.7 3.6 2 2 0 2 2 2 1 Sperm tail DUF1640 PF07798.11 ORF29147 - 0.017 15.2 7.8 0.017 15.2 7.8 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) Flu_B_M2 PF04772.12 ORF29147 - 4.1 7.7 11.2 0.37 11.0 1.5 3.4 1 1 3 4 4 4 0 Influenza B matrix protein 2 (BM2) Jacalin PF01419.17 ORF28356 - 2.7e-15 56.5 1.8 4.3e-08 33.2 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain Pyr_redox_2 PF07992.14 ORF26575 - 1.7e-33 116.2 0.4 2.6e-33 115.5 0.4 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF26575 - 2e-12 47.5 0.6 6e-12 46.0 0.4 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 ORF26575 - 8.8e-12 45.4 0.0 2.4e-11 44.1 0.0 1.7 2 0 0 2 2 2 1 Reductase C-terminal Trp_halogenase PF04820.14 ORF26575 - 2e-06 27.0 0.2 0.00034 19.6 0.1 2.2 1 1 1 2 2 2 2 Tryptophan halogenase Pyr_redox_3 PF13738.6 ORF26575 - 0.0021 17.4 0.1 0.0035 16.6 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF26575 - 0.019 14.5 0.3 0.046 13.3 0.1 1.7 2 0 0 2 2 2 0 FAD dependent oxidoreductase Amino_oxidase PF01593.24 ORF26575 - 0.15 11.3 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase FliC PF12445.8 ORF26575 - 0.25 11.7 0.8 3.2 8.1 0.3 2.3 1 1 0 1 1 1 0 Flagellin protein Cyclin_N PF00134.23 ORF2075 - 4e-23 81.5 0.8 7.9e-23 80.6 0.6 1.6 2 0 0 2 2 2 1 Cyclin, N-terminal domain mTERF PF02536.14 ORF17271 - 3.3e-23 82.1 0.0 4e-23 81.8 0.0 1.1 1 0 0 1 1 1 1 mTERF Ig_3 PF13927.6 ORF17271 - 0.0029 18.2 0.2 2.6 8.7 0.0 2.3 1 1 1 2 2 2 2 Immunoglobulin domain I-set PF07679.16 ORF17271 - 0.011 15.8 0.1 6.3 6.9 0.0 2.3 1 1 1 2 2 2 0 Immunoglobulin I-set domain DUF3606 PF12244.8 ORF17271 - 0.17 11.9 0.5 9.3 6.3 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3606) HTH_3 PF01381.22 ORF17271 - 1.4 9.0 4.9 39 4.4 0.0 4.0 5 0 0 5 5 5 0 Helix-turn-helix adh_short PF00106.25 ORF14794 - 2.8e-36 124.8 0.0 3.6e-36 124.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF14794 - 6.5e-21 75.0 0.0 8e-21 74.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF14794 - 4.6e-05 23.4 0.0 6.6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF14794 - 0.00029 20.1 0.0 0.00042 19.5 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein T_Ag_DNA_bind PF02217.16 ORF14794 - 0.048 14.3 0.2 0.1 13.2 0.2 1.5 1 0 0 1 1 1 0 Origin of replication binding protein NAD_binding_10 PF13460.6 ORF14794 - 0.085 12.7 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 NAD(P)H-binding UDPG_MGDP_dh_N PF03721.14 ORF14794 - 0.11 12.1 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_2 PF03446.15 ORF14794 - 0.11 12.6 0.0 0.32 11.1 0.0 1.6 1 1 1 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 ORF14794 - 0.14 12.3 0.0 0.31 11.1 0.0 1.6 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 ORF14794 - 0.16 12.6 0.0 0.29 11.8 0.0 1.4 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 ORF14794 - 0.18 11.7 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DAGAT PF03982.13 ORF14754 - 8e-34 116.9 0.0 9.8e-34 116.6 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol acyltransferase ComC PF03047.14 ORF13860 - 0.13 12.1 0.8 0.4 10.5 0.8 1.9 1 0 0 1 1 1 0 COMC family Jacalin PF01419.17 ORF12393 - 2.7e-15 56.5 1.8 4.3e-08 33.2 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain MORN PF02493.20 ORF110560 - 1.7e-31 106.2 80.2 2.6e-09 36.4 2.3 9.0 10 0 0 10 10 10 7 MORN repeat DUF3048_C PF17479.2 ORF110560 - 5.2 7.5 18.5 3.3 8.1 1.5 4.3 1 1 4 5 5 5 0 Protein of unknown function (DUF3048) C-terminal domain Ank_2 PF12796.7 ORF10902 - 1.3e-51 173.1 11.8 4.3e-11 43.3 0.1 4.7 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank PF00023.30 ORF10902 - 3.8e-43 144.1 17.0 7e-05 23.1 0.5 9.1 8 1 1 9 9 9 9 Ankyrin repeat Ank_4 PF13637.6 ORF10902 - 1.5e-42 143.4 19.9 1e-08 35.6 0.4 6.4 2 2 5 7 7 7 7 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF10902 - 3.4e-36 122.8 22.3 7.3e-08 32.5 0.5 8.9 1 1 8 9 9 9 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF10902 - 1e-34 114.6 9.0 0.00045 20.5 0.1 9.1 9 0 0 9 9 9 9 Ankyrin repeat PfkB PF00294.24 ORF108355 - 5.1e-67 226.3 0.4 5.8e-67 226.1 0.4 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF108355 - 0.0075 15.7 0.1 0.014 14.8 0.1 1.4 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiF PF00899.21 ORF101152 - 4e-43 147.5 0.0 4.4e-43 147.4 0.0 1.1 1 0 0 1 1 1 1 ThiF family UBA_e1_thiolCys PF10585.9 ORF101152 - 1.2e-39 136.8 1.0 1.2e-39 136.8 1.0 1.5 2 0 0 2 2 2 1 Ubiquitin-activating enzyme active site SeqA PF03925.13 ORF101152 - 0.012 15.6 0.0 0.024 14.6 0.0 1.5 1 0 0 1 1 1 0 SeqA protein C-terminal domain Glyco_hydro_31 PF01055.26 NODE_22879_length_895_cov_228.586047_g17728_i0reverse_frame_1 - 3.1e-53 181.6 3.7 3.6e-53 181.3 3.7 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 PAN_3 PF08277.12 NODE_22829_length_897_cov_5.745940_g17686_i0forward_frame_1 - 0.016 15.0 0.4 0.035 13.9 0.4 1.5 1 0 0 1 1 1 0 PAN-like domain DEFB136 PF17333.2 NODE_22778_length_898_cov_153.814600_g17639_i0forward_frame_2 - 0.75 9.8 7.7 9.1 6.3 0.5 3.7 3 1 0 3 3 3 0 Beta defensin 136 DUF1077 PF06417.12 NODE_22759_length_899_cov_70.901620_g5824_i1forward_frame_3 - 2 8.4 7.1 0.3 11.1 2.7 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1077) Phe_ZIP PF08916.11 NODE_22743_length_899_cov_363.284722_g17607_i0forward_frame_2 - 0.023 15.4 14.3 17 6.2 0.4 5.0 5 1 0 5 5 5 0 Phenylalanine zipper Pkinase PF00069.25 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 9.2e-51 172.7 0.1 1.6e-50 171.9 0.1 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 2.8e-35 121.9 0.0 4.3e-35 121.2 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 1.1e-06 27.9 0.8 2.3e-06 26.8 0.0 1.8 2 0 0 2 2 2 1 Haspin like kinase domain Kinase-like PF14531.6 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 2.2e-06 27.2 0.0 5e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Kinase-like DUF3552 PF12072.8 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 0.0042 16.5 14.7 0.0042 16.5 14.7 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF3552) APH PF01636.23 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 0.053 13.4 0.0 0.21 11.5 0.0 1.9 3 0 0 3 3 3 0 Phosphotransferase enzyme family Fez1 PF06818.15 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 0.09 13.2 9.2 0.14 12.6 9.2 1.3 1 0 0 1 1 1 0 Fez1 Uds1 PF15456.6 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 0.13 12.5 8.1 0.24 11.6 8.1 1.5 1 1 0 1 1 1 0 Up-regulated During Septation Exonuc_VII_L PF02601.15 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 0.32 10.5 3.4 0.43 10.1 3.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit BRE1 PF08647.11 NODE_22734_length_900_cov_4.321387_g17603_i0forward_frame_2 - 4.6 7.4 15.8 2.2 8.4 11.8 2.1 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase Beta-lactamase PF00144.24 ORF99034 - 5.1e-24 85.1 0.1 6.8e-24 84.7 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase Vps23_core PF09454.10 ORF97193 - 3.9e-15 55.6 0.4 7.7e-15 54.6 0.4 1.5 1 0 0 1 1 1 1 Vps23 core domain UEV PF05743.13 ORF97193 - 0.00019 21.3 0.1 0.00032 20.5 0.1 1.4 1 0 0 1 1 1 1 UEV domain Peptidase_S46 PF10459.9 ORF97193 - 0.0063 15.2 2.6 0.011 14.4 2.6 1.3 1 1 0 1 1 1 1 Peptidase S46 CHASE3 PF05227.13 ORF97193 - 0.16 11.9 3.3 2 8.4 0.4 2.9 3 0 0 3 3 3 0 CHASE3 domain DASH_Dad2 PF08654.10 ORF97193 - 1 9.8 5.1 0.61 10.5 0.5 2.7 2 2 1 3 3 3 0 DASH complex subunit Dad2 UPF0242 PF06785.11 ORF97193 - 3.2 7.8 11.9 0.43 10.7 5.6 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Pkinase PF00069.25 ORF9664 - 3e-66 223.5 0.2 3.7e-66 223.2 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9664 - 5e-32 111.2 0.0 6.3e-32 110.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF9664 - 9.3e-10 38.3 0.0 1.3e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_C PF00433.24 ORF9664 - 4e-06 27.4 2.1 8.2e-06 26.4 1.6 1.8 2 0 0 2 2 2 1 Protein kinase C terminal domain Pkinase_fungal PF17667.1 ORF9664 - 5.7e-06 25.4 0.0 8.6e-06 24.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF9664 - 0.0075 15.9 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 RIO1 family YrbL-PhoP_reg PF10707.9 ORF9664 - 0.063 12.8 0.0 0.094 12.2 0.0 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Kdo PF06293.14 ORF9664 - 0.073 12.4 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Inhibitor_Mig-6 PF11555.8 ORF9664 - 0.11 12.6 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 Hydrolase_6 PF13344.6 ORF92286 - 1.4e-12 47.6 0.0 4.8e-12 45.9 0.0 1.9 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 ORF92286 - 8.7e-12 45.5 0.0 5.3e-05 23.4 0.0 2.2 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF92286 - 1.3e-11 44.4 0.0 2.8e-11 43.3 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 ORF92286 - 8.5e-10 39.3 0.0 0.0011 19.4 0.0 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase cNMP_binding PF00027.29 ORF89292 - 5e-44 148.3 0.0 7e-23 80.5 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain NAD_binding_2 PF03446.15 ORF89111 - 2.7e-51 173.9 1.9 4.3e-51 173.2 1.9 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF89111 - 6e-38 129.8 2.2 6e-38 129.8 2.2 1.6 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 ORF89111 - 1.4e-09 38.4 1.8 1.5e-08 35.1 0.3 2.4 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 ORF89111 - 4e-08 32.8 0.2 1.3e-07 31.2 0.1 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 ORF89111 - 6.5e-05 22.9 0.7 0.00014 21.8 0.1 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 ORF89111 - 0.00063 19.4 0.4 0.0014 18.2 0.1 1.7 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 ORF89111 - 0.00084 19.4 2.0 0.0013 18.8 0.1 2.0 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_N PF05222.15 ORF89111 - 0.0051 17.1 0.0 0.013 15.8 0.0 1.6 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, N-terminal domain adh_short PF00106.25 ORF89111 - 0.0082 15.6 0.1 0.018 14.5 0.1 1.5 1 0 0 1 1 1 1 short chain dehydrogenase TrkA_N PF02254.18 ORF89111 - 0.014 15.6 0.0 0.054 13.7 0.0 2.0 1 1 0 1 1 1 0 TrkA-N domain GFO_IDH_MocA PF01408.22 ORF89111 - 0.029 15.2 0.2 0.085 13.7 0.0 1.8 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold UDPG_MGDP_dh_N PF03721.14 ORF89111 - 0.071 12.7 0.1 0.24 11.0 0.0 1.9 1 1 1 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPP1-like PF11833.8 ORF8786 - 4.8e-10 39.4 1.9 1.5e-09 37.8 1.9 1.9 1 1 0 1 1 1 1 Protein CHAPERONE-LIKE PROTEIN OF POR1-like RepC PF06504.11 ORF8786 - 0.015 14.5 0.0 0.022 14.0 0.0 1.1 1 0 0 1 1 1 0 Replication protein C (RepC) Peptidase_U4 PF03419.13 ORF8786 - 0.054 12.8 1.4 0.12 11.7 1.4 1.5 1 0 0 1 1 1 0 Sporulation factor SpoIIGA NAD_binding_2 PF03446.15 ORF87592 - 1.2e-44 152.2 0.2 1.8e-44 151.7 0.2 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF87592 - 2.2e-27 95.7 0.0 3.1e-27 95.2 0.0 1.2 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 2-Hacid_dh_C PF02826.19 ORF87592 - 1.1e-06 28.1 0.0 1.8e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF87592 - 0.00018 21.6 0.0 0.00037 20.5 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 ORF87592 - 0.0041 17.7 0.0 0.011 16.3 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 ORF87592 - 0.051 13.2 0.0 0.099 12.2 0.0 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain PhyH PF05721.13 ORF87232 - 2e-27 96.8 0.0 2.8e-27 96.4 0.0 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) HGWP PF03578.15 ORF87232 - 0.08 12.5 0.2 0.18 11.3 0.2 1.6 1 0 0 1 1 1 0 HGWP repeat Asparaginase PF00710.20 ORF87232 - 0.092 12.3 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 Asparaginase, N-terminal CS PF04969.16 ORF86632 - 6.7e-15 55.9 0.0 1.7e-14 54.6 0.0 1.6 2 0 0 2 2 2 1 CS domain Sec66 PF09802.9 ORF86632 - 0.0018 17.9 0.0 0.0028 17.3 0.0 1.3 1 0 0 1 1 1 1 Preprotein translocase subunit Sec66 CAP_N PF01213.19 ORF86632 - 5.1 6.5 7.7 8.9 5.7 7.7 1.4 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_carr PF00153.27 ORF83483 - 6.6e-21 74.1 2.8 8e-06 25.7 0.1 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein PG_isomerase_N PF18353.1 ORF83483 - 0.064 13.7 0.0 0.4 11.1 0.0 2.1 2 0 0 2 2 2 0 Phosphoglucose isomerase N-terminal domain DUF1657 PF07870.11 ORF79993 - 0.014 15.3 0.0 0.028 14.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1657) PDZ PF00595.24 ORF79993 - 0.083 13.3 0.1 0.15 12.4 0.1 1.4 1 0 0 1 1 1 0 PDZ domain DUF4431 PF14485.6 ORF79993 - 0.13 12.1 0.0 0.29 10.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4431) TTL PF03133.15 ORF79698 - 2.4e-39 135.2 0.0 4.1e-39 134.5 0.0 1.3 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF79698 - 5e-06 25.9 0.0 7.7e-06 25.3 0.0 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF79698 - 0.00042 19.7 0.0 0.0008 18.7 0.0 1.4 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp DUF313 PF03754.13 ORF75649 - 0.00061 20.0 4.5 0.0043 17.3 0.4 2.5 1 1 0 2 2 2 2 Domain of unknown function (DUF313) CHASE PF03924.13 ORF75649 - 0.053 13.5 0.2 0.081 12.9 0.2 1.4 1 0 0 1 1 1 0 CHASE domain Ank_2 PF12796.7 ORF73904 - 4.6e-22 78.4 1.3 3.2e-11 43.6 0.1 4.0 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF73904 - 1e-21 76.7 2.6 6.2e-08 32.8 0.1 4.9 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF73904 - 1.1e-15 56.1 0.5 0.015 15.8 0.0 6.6 5 1 1 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF73904 - 1.7e-11 44.4 0.8 0.00097 19.7 0.1 5.2 4 2 2 6 6 6 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF73904 - 1.7e-09 37.7 1.5 0.0054 17.1 0.0 4.9 4 2 1 5 5 5 3 Ankyrin repeat Pkinase PF00069.25 ORF73794 - 4.1e-53 180.4 0.0 4.7e-53 180.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73794 - 1.5e-23 83.4 0.0 2e-23 83.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF73794 - 0.0053 16.1 0.0 0.0073 15.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF73794 - 0.1 11.5 0.2 0.14 11.1 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain O-FucT PF10250.9 ORF73047 - 8e-26 91.5 0.0 8.8e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase UPF0052 PF01933.18 ORF73047 - 0.018 14.3 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0052 baeRF_family2 PF18844.1 ORF73047 - 0.057 13.5 0.1 0.078 13.0 0.1 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 cNMP_binding PF00027.29 ORF72566 - 5e-44 148.3 0.0 7e-23 80.5 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Toxin-deaminase PF14424.6 ORF71890 - 0.001 19.2 0.0 0.0019 18.3 0.0 1.3 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases SNAD4 PF18750.1 ORF71890 - 0.049 13.8 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC4 PF18775.1 ORF71890 - 0.072 13.3 0.1 0.29 11.3 0.1 2.0 2 0 0 2 2 2 0 APOBEC4 NAD1 PF18778.1 ORF71890 - 0.19 11.8 0.0 0.44 10.6 0.0 1.5 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 Peptidase_M3 PF01432.20 ORF71633 - 3.4e-73 247.5 0.0 4e-73 247.2 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 Peptidase_M43 PF05572.13 ORF71633 - 0.16 11.9 0.0 0.32 10.9 0.0 1.5 1 0 0 1 1 1 0 Pregnancy-associated plasma protein-A Peptidase_M50B PF13398.6 ORF71633 - 0.18 11.4 0.1 0.28 10.8 0.1 1.2 1 0 0 1 1 1 0 Peptidase M50B-like Ldh_1_C PF02866.18 ORF70927 - 4.6e-27 95.0 0.1 5.7e-27 94.7 0.1 1.1 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 ORF70927 - 4e-18 65.9 0.0 1.1e-17 64.5 0.0 1.7 2 0 0 2 2 2 1 lactate/malate dehydrogenase, NAD binding domain HTH_Tnp_4 PF13613.6 ORF70927 - 0.07 12.9 0.0 0.17 11.7 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease Mannosyl_trans2 PF04188.13 ORF70879 - 4e-47 161.5 5.5 5.6e-47 161.0 5.5 1.2 1 0 0 1 1 1 1 Mannosyltransferase (PIG-V) U-box PF04564.15 ORF68471 - 0.15 12.3 0.0 0.42 10.8 0.0 1.8 1 0 0 1 1 1 0 U-box domain RRM_1 PF00076.22 ORF67436 - 1e-13 50.9 0.0 1.6e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF67436 - 5.1e-06 26.5 0.0 1.3e-05 25.2 0.0 1.6 1 1 0 1 1 1 1 RNA recognition motif RRM_5 PF13893.6 ORF67436 - 0.041 13.5 0.0 0.063 12.9 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) B12-binding PF02310.19 ORF67436 - 0.12 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 B12 binding domain TBCC PF07986.12 ORF67436 - 0.13 12.0 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Tubulin binding cofactor C LysR_substrate PF03466.20 ORF66710 - 2e-53 180.9 4.8 3e-53 180.3 4.8 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF66710 - 1.3e-27 95.6 1.0 3.2e-27 94.2 0.2 2.2 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 ORF66710 - 9.7e-07 28.5 0.9 4.2e-05 23.3 0.0 2.7 3 0 0 3 3 3 1 PucR C-terminal helix-turn-helix domain HTH_50 PF18024.1 ORF66710 - 0.0049 16.4 0.4 0.27 10.9 0.1 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 ORF66710 - 0.026 14.4 0.1 0.072 13.0 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_28 PF13518.6 ORF66710 - 0.063 13.4 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 ORF66710 - 0.064 13.2 0.1 0.78 9.7 0.0 2.6 2 0 0 2 2 2 0 MarR family P22_Cro PF14549.6 ORF66710 - 0.16 11.9 0.1 0.55 10.1 0.0 1.8 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro Ank_2 PF12796.7 ORF61905 - 3.7e-12 46.7 0.1 0.0022 18.5 0.0 3.6 2 2 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF61905 - 4.5e-10 39.6 4.6 0.0034 17.7 0.0 4.2 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF61905 - 1.1e-08 35.4 1.4 0.027 15.1 0.0 4.5 4 1 1 5 5 5 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF61905 - 1.5e-08 34.2 1.8 0.029 14.9 0.0 4.7 5 0 0 5 5 5 2 Ankyrin repeat Ank PF00023.30 ORF61905 - 1.5e-08 34.7 2.1 0.026 15.0 0.0 4.2 4 1 0 4 4 4 2 Ankyrin repeat 3HCDH_N PF02737.18 ORF59159 - 7.5e-55 185.6 1.1 9.4e-55 185.3 1.1 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 ORF59159 - 5.8e-33 113.4 0.0 2.1e-32 111.6 0.0 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GGA_N-GAT PF18308.1 ORF59159 - 0.04 13.5 0.0 0.07 12.8 0.0 1.4 1 0 0 1 1 1 0 GGA N-GAT domain Methyltransf_21 PF05050.12 ORF54575 - 2.5e-07 30.9 0.1 9.2e-07 29.0 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase FkbM domain PHTB1_N PF14727.6 ORF54280 - 6.3e-86 289.3 0.0 7.5e-86 289.1 0.0 1.0 1 0 0 1 1 1 1 PTHB1 N-terminus AMP-binding PF00501.28 ORF51275 - 1.6e-41 142.3 0.0 2.1e-41 141.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF51275 - 4.9e-13 49.9 0.1 1.4e-12 48.4 0.1 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain HEPPP_synt_1 PF07307.11 ORF50720 - 0.081 12.5 0.4 0.15 11.6 0.4 1.4 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 Med8 PF10232.9 ORF50720 - 0.66 9.5 6.2 0.11 12.0 1.1 2.0 2 0 0 2 2 2 0 Mediator of RNA polymerase II transcription complex subunit 8 RRP7 PF12923.7 ORF50720 - 0.96 9.6 9.1 14 5.8 0.6 3.3 3 0 0 3 3 3 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain Rrn6 PF10214.9 ORF50720 - 4.9 5.5 9.7 6.1 5.2 9.7 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Porin_3 PF01459.22 ORF5041 - 1.6e-11 44.2 0.0 1.8e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic porin AMP-binding PF00501.28 ORF4711 - 4.6e-24 84.8 0.0 5.6e-24 84.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF4711 - 8.8e-24 84.3 0.2 1.7e-23 83.4 0.2 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF3667 PF12412.8 ORF4711 - 0.14 11.7 0.1 0.26 10.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) GpcrRhopsn4 PF10192.9 ORF46259 - 1.5e-24 86.9 4.0 1.7e-24 86.7 4.0 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain DUF1003 PF06210.11 ORF46259 - 0.27 11.3 0.1 0.27 11.3 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1003) Cupin_8 PF13621.6 ORF45998 - 5.7e-29 101.6 0.7 6.6e-29 101.4 0.7 1.2 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF45998 - 0.00022 20.8 1.7 0.00045 19.8 1.7 1.5 1 1 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF45998 - 0.0015 18.9 0.0 0.0029 18.0 0.0 1.5 1 1 0 1 1 1 1 JmjC domain, hydroxylase Cupin_2 PF07883.11 ORF45998 - 0.01 15.5 0.0 0.02 14.6 0.0 1.5 1 0 0 1 1 1 0 Cupin domain Vps23_core PF09454.10 ORF4578 - 3.9e-15 55.6 0.4 7.7e-15 54.6 0.4 1.5 1 0 0 1 1 1 1 Vps23 core domain UEV PF05743.13 ORF4578 - 0.00019 21.3 0.1 0.00032 20.5 0.1 1.4 1 0 0 1 1 1 1 UEV domain Peptidase_S46 PF10459.9 ORF4578 - 0.019 13.6 2.9 0.054 12.1 2.9 1.6 1 1 0 1 1 1 0 Peptidase S46 DASH_Dad2 PF08654.10 ORF4578 - 0.078 13.4 2.7 0.61 10.5 0.5 2.8 2 2 1 3 3 3 0 DASH complex subunit Dad2 HAUS2 PF15003.6 ORF4578 - 0.092 12.5 4.0 3.3 7.4 0.3 2.3 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 2 UPF0242 PF06785.11 ORF4578 - 0.9 9.6 8.6 0.35 11.0 5.6 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus MFS_1 PF07690.16 ORF44920 - 1.1e-17 64.0 10.5 1.3e-16 60.5 10.4 2.0 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF44920 - 0.0019 17.1 5.2 0.043 12.7 3.5 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter BT1 PF03092.16 ORF44920 - 0.082 11.1 0.5 1.7 6.8 0.0 2.2 2 0 0 2 2 2 0 BT1 family DUF1275 PF06912.11 ORF44920 - 0.73 9.7 11.9 0.17 11.8 2.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1275) zf-C2HE PF16278.5 ORF44168 - 0.00021 21.7 1.0 0.00053 20.4 1.0 1.6 1 0 0 1 1 1 1 C2HE / C2H2 / C2HC zinc-binding finger HSP70 PF00012.20 ORF42947 - 3e-134 448.5 0.3 3.3e-134 448.3 0.3 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF42947 - 6.9e-11 41.5 0.2 1.1e-10 40.8 0.2 1.4 1 0 0 1 1 1 1 MreB/Mbl protein HSP70 PF00012.20 ORF42946 - 4.4e-100 335.6 5.4 4.4e-100 335.6 5.4 1.4 2 0 0 2 2 2 1 Hsp70 protein HMGL-like PF00682.19 ORF42946 - 0.033 13.7 1.1 0.068 12.7 0.2 1.8 2 0 0 2 2 2 0 HMGL-like Tn7_Tnp_TnsA_C PF08721.11 ORF42946 - 0.049 14.3 0.2 0.14 12.9 0.1 1.8 1 1 0 1 1 1 0 TnsA endonuclease C terminal Phasin PF05597.11 ORF42946 - 0.2 11.7 6.7 0.26 11.3 5.5 1.8 2 0 0 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) YtxH PF12732.7 ORF42946 - 5.9 7.5 10.2 3.1 8.4 2.2 2.9 1 1 1 2 2 2 0 YtxH-like protein Presenilin PF01080.17 ORF35168 - 2.7 6.7 5.1 3.2 6.4 5.1 1.1 1 0 0 1 1 1 0 Presenilin Endostatin PF06482.11 ORF35168 - 8.9 5.7 6.3 12 5.2 6.3 1.2 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin AAA_9 PF12781.7 ORF34804 - 1.2e-41 142.3 1.0 1.8e-41 141.7 1.0 1.3 1 0 0 1 1 1 1 ATP-binding dynein motor region Sugar_transport PF06800.12 ORF32143 - 0.084 12.2 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Sugar transport protein TraF PF13728.6 ORF31553 - 0.00053 19.9 0.0 0.0047 16.8 0.0 2.0 2 0 0 2 2 2 1 F plasmid transfer operon protein DUF2946 PF11162.8 ORF31553 - 0.038 14.6 5.0 0.14 12.9 5.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2946) Thioredoxin_2 PF13098.6 ORF31553 - 0.075 13.5 0.0 0.28 11.7 0.0 1.9 1 1 0 1 1 1 0 Thioredoxin-like domain SNARE PF05739.19 ORF31553 - 0.13 12.3 0.7 8.2 6.5 0.0 2.8 3 0 0 3 3 3 0 SNARE domain Glucos_trans_II PF14264.6 ORF31553 - 0.17 11.2 1.3 0.3 10.4 0.9 1.4 1 1 0 1 1 1 0 Glucosyl transferase GtrII CEL_III_C PF18054.1 ORF31415 - 0.0082 16.2 2.6 0.018 15.1 2.6 1.5 1 0 0 1 1 1 1 CEL-III C-terminal Asp PF00026.23 ORF26032 - 1.9e-16 60.4 0.1 2.3e-16 60.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Coprogen_oxidas PF01218.18 ORF24975 - 8.7e-134 444.9 0.0 9.7e-134 444.7 0.0 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase HisG PF01634.18 ORF21500 - 2.2e-48 164.2 0.0 2.9e-48 163.9 0.0 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 ORF21500 - 1.2e-24 86.3 0.0 2.4e-24 85.3 0.0 1.5 1 0 0 1 1 1 1 HisG, C-terminal domain zf-C2H2 PF00096.26 ORF18729 - 1.1e-05 25.6 14.6 0.00078 19.8 1.2 3.0 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF18729 - 0.00012 22.6 10.6 0.13 13.2 1.1 3.0 2 0 0 2 2 2 2 C2H2-type zinc finger zf-Di19 PF05605.12 ORF18729 - 0.0083 16.4 4.0 0.012 15.9 3.1 1.7 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf_Hakai PF18408.1 ORF18729 - 0.47 10.2 6.7 0.12 12.1 1.0 2.2 2 0 0 2 2 2 0 C2H2 Hakai zinc finger domain PHD PF00628.29 ORF16299 - 0.0014 18.4 3.7 0.0046 16.8 3.7 1.9 1 0 0 1 1 1 1 PHD-finger Myosin_tail_1 PF01576.19 ORF16299 - 0.002 16.0 24.4 0.0026 15.6 24.4 1.1 1 0 0 1 1 1 1 Myosin tail zf-B_box PF00643.24 ORF16299 - 0.0023 18.1 7.9 0.0023 18.1 7.9 2.4 2 0 0 2 2 2 1 B-box zinc finger PHD_2 PF13831.6 ORF16299 - 0.016 14.8 1.6 0.038 13.6 1.6 1.6 1 0 0 1 1 1 0 PHD-finger DivIC PF04977.15 ORF16299 - 0.028 14.2 3.4 0.028 14.2 3.4 3.3 1 1 2 3 3 3 0 Septum formation initiator Prok-RING_1 PF14446.6 ORF16299 - 0.45 10.5 4.9 0.96 9.4 4.9 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 ETRAMP PF09716.10 ORF16299 - 0.8 9.8 3.4 3.1 7.9 0.0 3.0 1 1 1 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) DUF1690 PF07956.11 ORF16299 - 2.4 8.6 25.0 0.27 11.7 16.5 2.3 1 1 1 2 2 2 0 Protein of Unknown function (DUF1690) ATG16 PF08614.11 ORF16299 - 3.1 8.0 26.9 1.5 9.0 23.8 1.9 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) HSCB_C PF07743.13 ORF16299 - 3.2 8.3 17.6 8.6e+03 -2.7 17.6 3.1 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain ZYG-11_interact PF05884.12 ORF16299 - 3.9 6.8 5.5 7.6 5.9 5.3 1.5 1 1 0 1 1 1 0 Interactor of ZYG-11 SlyX PF04102.12 ORF16299 - 5.3 7.7 17.8 0.23 12.1 3.9 3.7 2 2 2 4 4 4 0 SlyX Fez1 PF06818.15 ORF16299 - 6.9 7.1 28.7 1.7 9.1 19.4 2.1 1 1 1 2 2 2 0 Fez1 IBR PF01485.21 ORF12297 - 0.012 15.9 3.4 0.014 15.6 0.8 2.1 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain Pet100 PF09803.9 ORF12297 - 0.04 14.4 1.7 0.12 12.9 0.4 2.3 2 0 0 2 2 2 0 Pet100 PPR PF01535.20 ORF12297 - 0.2 12.0 1.3 0.53 10.7 0.3 2.3 2 0 0 2 2 2 0 PPR repeat UPF0179 PF03684.13 ORF12297 - 0.27 11.1 3.3 2.1 8.2 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0179) zf-C4pol PF14260.6 ORF12297 - 0.3 11.6 2.3 17 6.0 0.1 2.4 2 0 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta ECH_1 PF00378.20 ORF108712 - 0.12 11.6 0.0 7.8 5.7 0.1 2.3 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase DUF1627 PF07789.12 ORF10709 - 0.073 12.7 0.8 0.17 11.6 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1627) EF-hand_1 PF00036.32 ORF104122 - 7.8e-32 106.4 18.9 6.7e-07 28.4 0.2 6.9 7 1 0 7 7 7 6 EF hand EF-hand_6 PF13405.6 ORF104122 - 4.7e-27 91.6 15.3 0.00013 21.7 0.2 6.7 6 1 0 6 6 6 6 EF-hand domain EF-hand_7 PF13499.6 ORF104122 - 2.9e-25 88.5 14.8 3.5e-09 37.0 1.1 4.5 2 1 2 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF104122 - 1.5e-20 71.7 14.5 0.00046 19.6 0.0 6.5 6 0 0 6 6 6 5 EF hand EF-hand_8 PF13833.6 ORF104122 - 4.3e-16 58.5 12.0 5.4e-05 23.0 0.1 5.9 5 1 1 6 6 6 3 EF-hand domain pair EF-hand_10 PF14788.6 ORF104122 - 1e-05 25.3 2.8 0.01 15.7 0.2 3.5 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF104122 - 5e-05 23.6 0.3 0.8 10.0 0.0 3.4 3 2 0 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF104122 - 0.0019 18.1 2.4 0.82 9.6 0.0 4.4 3 2 2 5 5 5 1 Caleosin related protein EF-hand_4 PF12763.7 ORF104122 - 0.0024 17.8 2.7 0.44 10.5 0.0 3.4 2 2 1 3 3 3 1 Cytoskeletal-regulatory complex EF hand SHOCT PF09851.9 ORF104122 - 0.1 12.4 1.5 8.1 6.3 0.0 3.6 4 0 0 4 4 4 0 Short C-terminal domain Peroxidase_2 PF01328.17 ORF104122 - 0.21 12.1 0.2 0.38 11.2 0.2 1.5 1 1 0 1 1 1 0 Peroxidase, family 2 Dockerin_1 PF00404.18 ORF104122 - 1.1 9.5 8.0 0.44 10.8 0.2 3.7 4 1 1 5 5 5 0 Dockerin type I domain Jnk-SapK_ap_N PF09744.9 ORF10017 - 4 7.6 9.4 7.3 6.8 9.4 1.4 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Fe-ADH PF00465.19 NODE_23029_length_892_cov_3.182030_g17854_i0reverse_frame_1 - 1.7e-27 96.2 0.0 2.5e-27 95.7 0.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 NODE_23029_length_892_cov_3.182030_g17854_i0reverse_frame_1 - 1.9e-07 31.1 0.0 4.3e-07 29.9 0.0 1.5 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase Stn1 PF10451.9 NODE_23026_length_892_cov_3.803967_g17851_i0reverse_frame_1 - 0.091 11.7 1.0 0.14 11.1 1.0 1.2 1 0 0 1 1 1 0 Telomere regulation protein Stn1 Acetyltransf_16 PF05301.11 NODE_23022_length_892_cov_44.417736_g17847_i0reverse_frame_1 - 5e-15 55.7 0.7 5e-15 55.7 0.7 1.5 2 0 0 2 2 2 1 GNAT acetyltransferase, Mec-17 Acetyltransf_7 PF13508.7 NODE_23022_length_892_cov_44.417736_g17847_i0reverse_frame_1 - 0.0092 16.4 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 NODE_23022_length_892_cov_44.417736_g17847_i0reverse_frame_1 - 0.098 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PQ-loop PF04193.14 NODE_22885_length_895_cov_113.701163_g17734_i0forward_frame_3 - 1.5e-06 27.8 8.2 1.5e-06 27.8 8.2 2.1 2 0 0 2 2 2 1 PQ loop repeat PQ-loop PF04193.14 NODE_22885_length_895_cov_113.701163_g17734_i0forward_frame_2 - 1.2e-13 50.6 0.1 1.2e-13 50.6 0.1 2.8 3 0 0 3 3 3 2 PQ loop repeat Syndecan PF01034.20 NODE_22879_length_895_cov_228.586047_g17728_i0forward_frame_2 - 2.2 8.2 9.0 1.3 9.0 0.9 3.2 3 0 0 3 3 3 0 Syndecan domain PHR PF08005.12 NODE_22798_length_897_cov_635.227378_g14981_i2forward_frame_3 - 0.0099 16.6 0.7 0.028 15.1 0.0 1.9 1 1 1 2 2 2 1 PHR domain ZapB PF06005.12 NODE_22798_length_897_cov_635.227378_g14981_i2forward_frame_2 - 0.027 14.9 2.2 0.11 13.0 0.7 2.3 2 0 0 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 NODE_22798_length_897_cov_635.227378_g14981_i2forward_frame_2 - 1.7 8.5 5.8 0.21 11.3 1.4 1.7 2 0 0 2 2 2 0 Septum formation initiator Bax1-I PF01027.20 ORF99950 - 3.1e-38 131.7 13.8 3.1e-38 131.7 13.8 1.8 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 DUF5353 PF17304.2 ORF99950 - 0.016 14.9 5.4 0.88 9.4 1.2 2.9 2 1 0 2 2 2 0 Family of unknown function (DUF5353) Phage_holin_3_1 PF05106.12 ORF99950 - 0.07 13.6 2.9 0.089 13.2 0.6 2.2 1 1 1 2 2 2 0 Phage holin family (Lysis protein S) MitoNEET_N PF10660.9 ORF99950 - 0.73 9.9 4.9 1.3 9.1 0.1 2.8 3 0 0 3 3 3 0 Iron-containing outer mitochondrial membrane protein N-terminus NCE101 PF11654.8 ORF99950 - 7.1 6.4 6.2 2.7 7.8 0.2 2.9 3 0 0 3 3 3 0 Non-classical export protein 1 LysR_substrate PF03466.20 ORF9759 - 7.4e-25 87.5 0.0 1.1e-24 87.0 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF9759 - 2e-15 56.5 0.0 3.9e-15 55.5 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_23 PF13384.6 ORF9759 - 0.032 14.0 0.0 0.06 13.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_30 PF13556.6 ORF9759 - 0.047 13.5 0.1 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain PAS_11 PF14598.6 ORF91290 - 0.0031 17.6 0.0 0.01 15.9 0.0 1.9 1 0 0 1 1 1 1 PAS domain SelP_N PF04592.14 ORF90057 - 2.2 7.6 21.8 3 7.2 21.8 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Ank_2 PF12796.7 ORF89409 - 5.1e-20 71.8 4.5 8.1e-13 48.8 0.1 4.0 2 2 1 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF89409 - 3e-19 68.5 8.7 5.7e-06 26.5 0.1 6.1 5 1 0 5 5 5 3 Ankyrin repeat Ank_4 PF13637.6 ORF89409 - 3.7e-19 68.8 7.4 1.4e-08 35.1 0.1 6.1 3 1 3 6 6 6 6 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF89409 - 2e-14 53.4 9.0 8.2e-06 26.0 0.2 5.3 3 2 3 6 6 6 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF89409 - 6.5e-13 47.6 12.5 0.0025 18.2 0.1 7.2 7 0 0 7 7 7 3 Ankyrin repeat DUF5499 PF17603.2 ORF81741 - 0.00051 20.6 0.7 0.0016 19.0 0.7 1.9 1 0 0 1 1 1 1 Family of unknown function (DUF5499) Adaptin_binding PF10199.9 ORF81379 - 1e-16 61.7 6.5 2.3e-16 60.5 6.5 1.6 1 0 0 1 1 1 1 Alpha and gamma adaptin binding protein p34 Flp_N PF03930.14 ORF81379 - 0.022 14.7 2.1 0.09 12.8 0.8 2.3 2 0 0 2 2 2 0 Recombinase Flp protein N-terminus Packaging_FI PF14000.6 ORF81379 - 0.034 14.6 0.9 0.059 13.8 0.9 1.4 1 0 0 1 1 1 0 DNA packaging protein FI Ank_2 PF12796.7 ORF75396 - 5.1e-20 71.8 4.5 8.1e-13 48.8 0.1 4.0 2 2 1 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF75396 - 3e-19 68.5 8.7 5.7e-06 26.5 0.1 6.1 5 1 0 5 5 5 3 Ankyrin repeat Ank_4 PF13637.6 ORF75396 - 3.7e-19 68.8 7.4 1.4e-08 35.1 0.1 6.1 3 1 3 6 6 6 6 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF75396 - 2e-14 53.4 9.0 8.2e-06 26.0 0.2 5.3 3 2 3 6 6 6 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF75396 - 6.5e-13 47.6 12.5 0.0025 18.2 0.1 7.2 7 0 0 7 7 7 3 Ankyrin repeat Pkinase PF00069.25 ORF75216 - 1.1e-54 185.6 2.4 1.2e-54 185.5 2.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF75216 - 1.2e-20 73.9 0.3 2.4e-20 72.9 0.2 1.4 1 1 1 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF75216 - 6.3e-07 29.5 0.0 1.1e-05 25.4 0.1 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF75216 - 0.0011 18.6 0.5 0.0029 17.2 0.2 1.8 1 1 1 2 2 2 1 Choline/ethanolamine kinase Kdo PF06293.14 ORF75216 - 0.0097 15.3 1.5 0.013 14.9 0.7 1.8 2 1 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF75216 - 0.014 14.2 0.2 0.053 12.3 0.0 1.8 2 0 0 2 2 2 0 Fungal protein kinase SpoIISB_antitox PF14185.6 ORF75216 - 0.064 13.1 0.1 0.79 9.6 0.0 2.5 2 0 0 2 2 2 0 Antitoxin SpoIISB, type II toxin-antitoxin system adh_short PF00106.25 ORF74380 - 4.1e-37 127.5 0.0 5e-37 127.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF74380 - 1e-21 77.6 0.0 1.3e-21 77.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF74380 - 4.6e-07 29.9 0.0 6.5e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF74380 - 7.1e-05 22.1 0.0 0.00021 20.5 0.0 1.6 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein T_Ag_DNA_bind PF02217.16 ORF74380 - 0.0052 17.4 0.2 0.011 16.3 0.2 1.5 1 0 0 1 1 1 1 Origin of replication binding protein Sacchrp_dh_NADP PF03435.18 ORF74380 - 0.0073 16.6 0.0 0.013 15.8 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 ORF74380 - 0.054 13.4 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_10 PF13460.6 ORF74380 - 0.14 12.0 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 NAD(P)H-binding NAD_binding_2 PF03446.15 ORF74380 - 0.17 12.1 0.0 1.5 9.0 0.0 2.1 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Pkinase PF00069.25 ORF74163 - 0.002 17.5 1.9 0.0041 16.5 0.0 2.3 3 0 0 3 3 3 1 Protein kinase domain SNARE_assoc PF09335.11 ORF73779 - 1.2e-21 77.4 8.8 1.2e-21 77.4 8.8 2.0 2 0 0 2 2 2 1 SNARE associated Golgi protein PBP1_TM PF14812.6 ORF73779 - 0.0038 17.6 0.0 0.007 16.7 0.0 1.5 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF2663 PF10864.8 ORF73779 - 0.16 12.4 0.0 0.38 11.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Saf_2TM PF18303.1 ORF73779 - 0.88 9.1 0.0 0.88 9.1 0.0 2.6 3 1 0 3 3 3 0 SAVED-fused 2TM effector domain HYLS1_C PF15311.6 ORF72245 - 1.1 10.1 4.2 0.87 10.4 0.2 2.7 2 1 0 2 2 2 0 Hydrolethalus syndrome protein 1 C-terminus DUF4407 PF14362.6 ORF72245 - 4.6 6.5 8.1 6.7 6.0 8.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks52.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks52.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks52.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks52.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-C2H2 PF00096.26 ORF68614 - 0.016 15.7 2.0 0.036 14.5 2.0 1.7 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF68614 - 0.017 15.9 1.7 0.043 14.7 1.7 1.7 1 0 0 1 1 1 0 C2H2-type zinc finger zf-Di19 PF05605.12 ORF68614 - 0.11 12.9 0.8 0.23 11.8 0.8 1.5 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Ndc1_Nup PF09531.10 ORF68614 - 2.9 6.5 6.1 2.8 6.5 6.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Presenilin PF01080.17 ORF68614 - 4.2 6.0 10.2 5 5.8 10.2 1.2 1 0 0 1 1 1 0 Presenilin Sec8_exocyst PF04048.14 ORF66745 - 0.0016 18.4 4.9 0.32 10.9 1.1 2.3 2 0 0 2 2 2 2 Sec8 exocyst complex component specific domain AATF-Che1 PF13339.6 ORF66745 - 0.0027 18.4 10.6 0.0067 17.1 5.5 2.2 2 0 0 2 2 2 1 Apoptosis antagonizing transcription factor Filament PF00038.21 ORF66745 - 0.0057 16.3 15.1 0.2 11.2 8.3 2.1 2 0 0 2 2 2 2 Intermediate filament protein Exonuc_VII_L PF02601.15 ORF66745 - 0.049 13.2 3.9 0.52 9.8 2.1 2.1 2 0 0 2 2 2 0 Exonuclease VII, large subunit CopC PF04234.12 ORF66745 - 0.071 14.2 0.3 0.19 12.8 0.3 1.8 1 0 0 1 1 1 0 CopC domain DUF812 PF05667.11 ORF66745 - 0.08 11.8 13.8 0.91 8.3 9.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF812) Spc24 PF08286.11 ORF66745 - 0.15 12.3 10.6 0.97 9.7 0.1 2.6 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 Laminin_II PF06009.12 ORF66745 - 0.25 11.4 6.2 2.8 7.9 1.5 2.7 3 0 0 3 3 3 0 Laminin Domain II YkyA PF10368.9 ORF66745 - 0.36 10.5 18.3 0.47 10.1 8.6 2.1 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein MAD PF05557.13 ORF66745 - 0.46 8.8 15.3 0.02 13.3 7.2 1.9 2 0 0 2 2 2 0 Mitotic checkpoint protein Spc7 PF08317.11 ORF66745 - 0.57 9.0 18.4 0.81 8.5 10.0 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein TMPIT PF07851.13 ORF66745 - 0.59 9.3 13.4 1.7 7.8 5.5 2.2 2 0 0 2 2 2 0 TMPIT-like protein DUF4795 PF16043.5 ORF66745 - 1 9.0 16.2 0.38 10.3 8.9 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) DUF1664 PF07889.12 ORF66745 - 1.2 9.1 11.7 1.1 9.3 3.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) UPF0449 PF15136.6 ORF66745 - 2.3 8.8 9.4 20 5.7 3.9 2.7 2 1 1 3 3 3 0 Uncharacterised protein family UPF0449 YscO PF07321.12 ORF66745 - 2.9 7.8 16.1 0.43 10.5 8.0 2.3 2 0 0 2 2 2 0 Type III secretion protein YscO COG2 PF06148.11 ORF66745 - 3.6 7.7 12.4 1 9.4 2.3 2.9 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF5082 PF16888.5 ORF66745 - 4.7 7.5 14.1 1.6 9.0 1.2 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) TPR_MLP1_2 PF07926.12 ORF66745 - 4.8 7.2 19.6 0.55 10.3 1.5 2.7 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF4404 PF14357.6 ORF66745 - 4.9 7.9 8.2 4.7 7.9 3.5 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) Cob_adeno_trans PF01923.18 ORF66745 - 4.9 7.3 7.3 2.4 8.3 1.5 2.4 2 1 0 2 2 2 0 Cobalamin adenosyltransferase DUF4201 PF13870.6 ORF66745 - 5.1 6.8 17.0 1.5 8.6 8.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) Bcr-Abl_Oligo PF09036.10 ORF66745 - 6.6 6.8 10.7 0.46 10.5 0.7 3.1 2 1 1 3 3 3 0 Bcr-Abl oncoprotein oligomerisation domain Golgin_A5 PF09787.9 ORF66745 - 9.6 5.6 16.0 6.5 6.1 6.2 2.1 2 0 0 2 2 2 0 Golgin subfamily A member 5 Spc7 PF08317.11 ORF61812 - 0.0026 16.7 20.4 0.0026 16.7 20.4 2.5 1 1 1 2 2 2 2 Spc7 kinetochore protein Gon7 PF08738.10 ORF61812 - 0.031 14.4 0.5 0.031 14.4 0.5 3.2 1 1 2 4 4 4 0 Gon7 family DUF812 PF05667.11 ORF61812 - 0.14 11.1 30.3 0.12 11.2 21.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF812) IFT57 PF10498.9 ORF61812 - 0.36 9.8 37.6 0.76 8.7 10.8 2.1 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 ApoO PF09769.9 ORF61812 - 0.6 10.1 10.1 1.7 8.6 0.3 2.7 2 1 1 3 3 3 0 Apolipoprotein O DUF4407 PF14362.6 ORF61812 - 1.2 8.4 22.6 43 3.3 22.6 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Nup54 PF13874.6 ORF61812 - 1.5 9.0 14.6 40 4.3 14.6 2.5 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 Golgin_A5 PF09787.9 ORF61812 - 1.9 7.9 31.3 1 8.8 20.9 2.4 1 1 1 2 2 2 0 Golgin subfamily A member 5 DUF883 PF05957.13 ORF61812 - 2.1 9.0 5.7 4.9 7.8 0.7 3.2 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF2716 PF10898.8 ORF61812 - 3.1 8.2 9.5 8.3 6.8 0.5 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2716) DUF5082 PF16888.5 ORF61812 - 3.6 7.9 36.2 0.15 12.3 5.5 3.8 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) DUF2252 PF10009.9 ORF61812 - 4.1 6.4 10.5 0.33 9.9 5.1 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2252) HSCB_C PF07743.13 ORF61812 - 4.8 7.8 14.7 0.076 13.5 1.8 3.7 2 1 2 4 4 4 0 HSCB C-terminal oligomerisation domain Laminin_II PF06009.12 ORF61812 - 7.8 6.5 24.7 7 6.7 0.2 3.4 1 1 2 4 4 4 0 Laminin Domain II UBA PF00627.31 ORF61345 - 2.1e-05 24.3 0.1 4.8e-05 23.2 0.1 1.6 1 0 0 1 1 1 1 UBA/TS-N domain MMR1 PF08505.10 ORF61345 - 0.89 9.8 21.6 1.4 9.1 21.6 1.5 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein Presenilin PF01080.17 ORF61345 - 1.5 7.5 25.5 2 7.1 25.5 1.3 1 0 0 1 1 1 0 Presenilin Aldedh PF00171.22 ORF5852 - 1.3e-18 66.7 0.0 1.6e-18 66.5 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Hydantoinase_B PF02538.14 ORF585 - 0.26 9.7 2.2 0.35 9.2 2.2 1.1 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase APC1_C PF18122.1 ORF585 - 0.99 9.3 4.1 4.3 7.2 2.2 2.7 1 1 0 2 2 2 0 Anaphase-promoting complex sub unit 1 C-terminal domain Phage_integrase PF00589.22 ORF58286 - 8.9e-53 178.6 0.0 1.6e-52 177.8 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 ORF58286 - 3.2e-27 94.7 0.9 7.1e-27 93.5 0.9 1.6 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 ORF58286 - 7.9e-05 23.1 0.1 0.00085 19.8 0.1 2.3 1 1 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 ORF58286 - 0.0058 17.0 0.0 0.13 12.6 0.0 2.3 1 1 1 2 2 2 1 Phage integrase SAM-like domain DUF3435 PF11917.8 ORF58286 - 0.058 12.3 0.1 0.081 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Phage_int_SAM_6 PF18644.1 ORF58286 - 0.19 11.8 0.0 0.37 10.8 0.0 1.5 1 0 0 1 1 1 0 Phage integrase SAM-like domain DUF2870 PF11069.8 ORF56503 - 3.5e-41 139.5 1.5 4.8e-41 139.1 0.7 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2870) TRP PF06011.12 ORF5232 - 0.025 13.3 14.1 0.29 9.8 14.1 2.0 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel LapA_dom PF06305.11 ORF5232 - 0.037 13.9 0.2 0.52 10.2 0.0 2.4 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain LRR19-TM PF15176.6 ORF5232 - 0.32 11.0 0.1 0.32 11.0 0.1 3.0 2 1 1 3 3 3 0 Leucine-rich repeat family 19 TM domain Asp PF00026.23 ORF51458 - 1.3e-29 103.6 0.3 1.6e-29 103.3 0.3 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF51458 - 3.9e-05 23.5 0.0 6.3e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF51458 - 0.17 12.5 0.0 0.34 11.6 0.0 1.5 1 0 0 1 1 1 0 Aspartyl protease PPR_2 PF13041.6 ORF50497 - 8.5e-14 51.5 0.0 6.4e-06 26.3 0.0 3.5 1 1 2 3 3 3 3 PPR repeat family PPR PF01535.20 ORF50497 - 1e-09 38.0 0.5 0.017 15.3 0.0 4.6 4 0 0 4 4 4 3 PPR repeat PPR_3 PF13812.6 ORF50497 - 6.8e-08 32.5 0.0 0.0022 18.0 0.0 3.2 1 1 2 3 3 3 3 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF50497 - 0.0001 21.7 0.0 0.12 11.7 0.0 2.1 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP ATP-grasp_4 PF13535.6 ORF50497 - 0.0035 17.0 0.0 3.5 7.2 0.0 3.1 1 1 2 3 3 3 1 ATP-grasp domain PPR_1 PF12854.7 ORF50497 - 0.007 16.0 0.0 3.8 7.3 0.0 4.1 4 0 0 4 4 4 1 PPR repeat VirB7 PF17413.2 ORF50497 - 0.025 13.9 0.7 0.051 12.9 0.1 1.9 2 0 0 2 2 2 0 Outer membrane lipoprotein virB7 Photo_RC PF00124.19 ORF50497 - 0.12 11.5 3.3 8.3 5.5 0.1 3.4 1 1 2 4 4 4 0 Photosynthetic reaction centre protein Flu_B_NS1 PF02942.14 ORF50497 - 0.19 10.8 0.0 40 3.2 0.0 3.1 1 1 2 3 3 3 0 Influenza B non-structural protein (NS1) Usher PF00577.20 ORF46791 - 3.9e-117 392.4 4.8 4.5e-117 392.2 4.8 1.0 1 0 0 1 1 1 1 Outer membrane usher protein Peptidase_C14 PF00656.22 ORF46755 - 0.0028 17.6 0.2 0.0074 16.3 0.2 1.7 1 1 0 1 1 1 1 Caspase domain TFIIA PF03153.13 ORF46755 - 0.032 14.3 0.1 0.032 14.3 0.1 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Bax1-I PF01027.20 ORF40163 - 3.1e-38 131.7 13.8 3.1e-38 131.7 13.8 1.8 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 DUF5353 PF17304.2 ORF40163 - 0.016 14.9 5.4 0.88 9.4 1.2 2.9 2 1 0 2 2 2 0 Family of unknown function (DUF5353) Phage_holin_3_1 PF05106.12 ORF40163 - 0.07 13.6 2.9 0.089 13.2 0.6 2.2 1 1 1 2 2 2 0 Phage holin family (Lysis protein S) MitoNEET_N PF10660.9 ORF40163 - 0.73 9.9 4.9 1.3 9.1 0.1 2.8 3 0 0 3 3 3 0 Iron-containing outer mitochondrial membrane protein N-terminus NCE101 PF11654.8 ORF40163 - 7.1 6.4 6.2 2.7 7.8 0.2 2.9 3 0 0 3 3 3 0 Non-classical export protein 1 TPR_14 PF13428.6 ORF39657 - 0.0078 17.0 4.0 4.8 8.3 0.2 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF39657 - 0.071 13.6 0.5 19 5.8 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TRP PF06011.12 ORF3880 - 0.055 12.2 10.9 0.84 8.3 10.9 2.0 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel 2TM PF13239.6 ORF3880 - 0.77 10.1 0.1 0.77 10.1 0.1 2.8 2 1 0 2 2 2 0 2TM domain DUF3792 PF12670.7 ORF3880 - 4.4 7.5 11.9 0.19 11.9 1.4 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3792) CA_like PF10563.9 ORF38142 - 7.1e-38 130.3 0.0 9.2e-38 130.0 0.0 1.1 1 0 0 1 1 1 1 Putative carbonic anhydrase Asp-B-Hydro_N PF05279.11 ORF36453 - 0.011 15.8 4.7 0.018 15.1 4.7 1.3 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region COX6C PF02937.15 ORF36453 - 0.91 9.7 6.6 5.9 7.1 0.4 3.2 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VIc DUF4207 PF13904.6 ORF34092 - 0.71 9.5 30.0 1.2 8.7 30.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4207) TRP PF06011.12 ORF32329 - 0.07 11.9 10.9 1.1 7.9 10.9 2.0 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel FYDLN_acid PF09538.10 ORF32329 - 0.29 11.8 5.9 0.24 12.1 4.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) LRR19-TM PF15176.6 ORF32329 - 0.4 10.7 0.0 0.4 10.7 0.0 2.9 2 1 1 3 3 3 0 Leucine-rich repeat family 19 TM domain Raftlin PF15250.6 ORF32329 - 0.67 8.6 5.6 0.92 8.2 5.6 1.1 1 0 0 1 1 1 0 Raftlin 2TM PF13239.6 ORF32329 - 0.92 9.9 0.0 0.92 9.9 0.0 2.9 2 1 0 2 2 2 0 2TM domain DUF3792 PF12670.7 ORF32329 - 4.4 7.5 11.9 0.19 11.9 1.4 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3792) PAS_11 PF14598.6 ORF31744 - 0.0031 17.6 0.0 0.01 15.9 0.0 1.9 1 0 0 1 1 1 1 PAS domain CRAL_TRIO PF00650.20 ORF30552 - 2.7e-18 66.2 0.0 3.8e-18 65.7 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain Rhodanese PF00581.20 ORF21063 - 3.2e-15 56.5 0.0 5.7e-08 33.2 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain RCC1 PF00415.18 ORF17821 - 4.7e-14 52.7 1.3 1.4e-07 32.0 0.1 3.0 3 1 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF17821 - 0.00026 20.7 11.1 0.0098 15.7 1.5 2.8 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DnaJ PF00226.31 ORF1618 - 0.00059 19.9 0.4 0.0012 18.9 0.0 1.7 2 0 0 2 2 2 1 DnaJ domain ORC6 PF05460.13 ORF1618 - 0.82 8.9 21.2 1.1 8.5 21.2 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) SSrecog PF03531.14 ORF1618 - 1.3 8.9 3.6 4.5 7.3 0.3 2.3 2 0 0 2 2 2 0 Structure-specific recognition protein (SSRP1) Menin PF05053.13 ORF1618 - 2.2 6.5 9.5 2.7 6.2 9.5 1.1 1 0 0 1 1 1 0 Menin PPL5 PF18168.1 ORF1618 - 3.9 6.7 8.1 5.7 6.1 8.1 1.3 1 0 0 1 1 1 0 Prim-pol family 5 NARP1 PF12569.8 ORF1618 - 4.3 6.1 15.8 5.2 5.9 15.8 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Neur_chan_memb PF02932.16 ORF1618 - 5.9 6.9 9.4 7.9 6.5 9.4 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Presenilin PF01080.17 ORF1618 - 7.5 5.2 14.1 9.3 4.9 14.1 1.1 1 0 0 1 1 1 0 Presenilin RdRP PF05183.12 ORF15938 - 4.5e-14 52.0 0.1 6.4e-14 51.5 0.1 1.2 1 0 0 1 1 1 1 RNA dependent RNA polymerase REGB_T4 PF10715.9 ORF15938 - 0.046 13.9 0.2 0.12 12.6 0.1 1.8 1 1 0 1 1 1 0 T4-page Endoribonuclease RegB Vps62 PF06101.11 ORF15819 - 0.00057 18.3 0.0 0.00087 17.7 0.0 1.2 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 62 Fibrillarin PF01269.17 ORF14105 - 1.8e-108 360.9 0.2 2.1e-108 360.6 0.2 1.0 1 0 0 1 1 1 1 Fibrillarin GCD14 PF08704.10 ORF14105 - 0.00027 20.7 0.0 0.00038 20.2 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 ORF14105 - 0.0083 15.9 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltr_RsmB-F PF01189.17 ORF14105 - 0.019 14.6 0.0 0.048 13.3 0.0 1.6 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 ORF14105 - 0.14 12.2 0.0 0.38 10.8 0.0 1.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase Trp_Tyr_perm PF03222.13 ORF13302 - 2.4e-100 336.4 20.4 2.7e-100 336.2 20.4 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF4217 PF13959.6 ORF112350 - 0.00068 19.8 0.1 0.0018 18.5 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) Vpu PF00558.19 ORF112350 - 4.1 7.3 6.5 7.3 6.4 5.2 2.1 2 0 0 2 2 2 0 Vpu protein Aldo_ket_red PF00248.21 ORF111999 - 4.6e-29 101.5 0.0 1.6e-22 80.0 0.0 2.0 1 1 1 2 2 2 2 Aldo/keto reductase family zf-CCCH PF00642.24 ORF109356 - 5.6e-19 67.6 14.3 2.5e-11 43.2 1.1 2.8 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF109356 - 1.1e-10 41.2 23.5 1.1e-06 28.5 2.2 3.2 4 0 0 4 4 4 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF109356 - 1.2e-06 28.1 12.9 0.0077 16.0 0.5 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF109356 - 0.038 14.7 2.0 0.038 14.7 2.0 3.0 2 2 1 3 3 3 0 Torus domain zf-CCCH_2 PF14608.6 ORF109356 - 0.11 13.0 0.6 0.11 13.0 0.6 2.8 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Lustrin_cystein PF14625.6 ORF109356 - 1.7 9.1 6.1 10 6.6 4.8 2.6 1 1 1 2 2 2 0 Lustrin, cysteine-rich repeated domain Snapin_Pallidin PF14712.6 ORF107910 - 0.38 11.2 21.5 0.7 10.3 5.1 4.4 4 0 0 4 4 4 0 Snapin/Pallidin Baculo_PEP_C PF04513.12 ORF107910 - 0.4 10.7 6.7 2 8.5 0.7 3.4 2 2 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus FUSC PF04632.12 ORF107910 - 0.99 7.9 25.2 0.86 8.1 2.8 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein family DUF1664 PF07889.12 ORF107910 - 1.4 9.0 15.4 0.16 12.0 0.5 3.3 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) DUF4407 PF14362.6 ORF107910 - 1.4 8.2 21.4 6.2 6.1 20.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) IL15 PF02372.15 ORF107910 - 1.6 8.8 6.2 5.6 7.0 0.6 2.7 1 1 1 2 2 2 0 Interleukin 15 Spc7 PF08317.11 ORF107910 - 3.2 6.6 30.2 3.8 6.3 1.4 2.8 1 1 2 3 3 3 0 Spc7 kinetochore protein CHD5 PF04420.14 ORF107910 - 9.1 6.1 12.6 0.13 12.1 2.0 3.0 2 1 1 3 3 3 0 CHD5-like protein Lipase_3 PF01764.25 ORF105244 - 7.8e-28 97.1 0.0 1.5e-27 96.2 0.0 1.5 1 0 0 1 1 1 1 Lipase (class 3) Esterase PF00756.20 ORF105244 - 0.01 15.5 0.0 0.02 14.6 0.0 1.4 1 0 0 1 1 1 0 Putative esterase DUF5528 PF17666.1 ORF105244 - 0.13 12.2 0.1 0.25 11.3 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5528) UBA_e1_thiolCys PF10585.9 ORF101151 - 1.6e-19 70.8 5.6 1.6e-19 70.8 5.6 1.8 2 1 0 2 2 2 1 Ubiquitin-activating enzyme active site E1_UFD PF09358.10 ORF101151 - 3.9e-09 37.1 2.6 3.9e-09 37.1 2.6 2.6 2 1 0 2 2 2 1 Ubiquitin fold domain ThiF PF00899.21 ORF101151 - 4.4e-08 32.8 0.0 6.3e-08 32.3 0.0 1.3 1 0 0 1 1 1 1 ThiF family E2_bind PF08825.10 ORF101151 - 0.0034 17.5 1.6 0.0057 16.8 0.2 2.0 2 0 0 2 2 2 1 E2 binding domain DUF226 PF02890.14 ORF101151 - 0.015 15.3 2.8 0.22 11.5 0.1 3.0 2 1 1 3 3 3 0 Borrelia family of unknown function DUF226 CDC24 PF06395.11 ORF101151 - 0.043 14.1 0.4 0.15 12.3 0.1 2.0 2 0 0 2 2 2 0 CDC24 Calponin TMEM37 PF15108.6 ORF101151 - 0.2 11.5 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 Voltage-dependent calcium channel gamma-like subunit protein family IBB PF01749.20 ORF101084 - 0.093 13.2 2.2 0.26 11.8 2.2 1.7 1 0 0 1 1 1 0 Importin beta binding domain SBP_bac_8 PF13416.6 NODE_23153_length_889_cov_3.023419_g17963_i0reverse_frame_1 - 1.4e-24 87.4 5.4 1.6e-24 87.2 5.4 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 NODE_23153_length_889_cov_3.023419_g17963_i0reverse_frame_1 - 6.7e-21 75.5 6.0 8.3e-21 75.3 6.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 NODE_23153_length_889_cov_3.023419_g17963_i0reverse_frame_1 - 8.2e-15 54.9 2.6 9.6e-10 38.3 0.2 2.1 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein Glyco_hydro_62 PF03664.13 NODE_23153_length_889_cov_3.023419_g17963_i0reverse_frame_1 - 0.018 14.4 0.7 0.038 13.3 0.1 1.8 2 0 0 2 2 2 0 Glycosyl hydrolase family 62 Phosphonate-bd PF12974.7 NODE_23153_length_889_cov_3.023419_g17963_i0reverse_frame_1 - 0.045 13.3 0.0 0.074 12.6 0.0 1.3 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein Ral PF11058.8 NODE_23153_length_889_cov_3.023419_g17963_i0reverse_frame_1 - 0.16 11.6 0.0 0.28 10.8 0.0 1.3 1 0 0 1 1 1 0 Antirestriction protein Ral PP2C PF00481.21 NODE_23116_length_890_cov_5.270175_g17930_i0reverse_frame_1 - 2.5e-07 30.6 0.0 3.6e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C Cyclin PF08613.11 NODE_23106_length_890_cov_99.084211_g17920_i0forward_frame_1 - 4.7e-05 23.8 0.5 6.2e-05 23.4 0.5 1.2 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 NODE_23106_length_890_cov_99.084211_g17920_i0forward_frame_1 - 0.00016 21.4 0.0 0.00038 20.2 0.0 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain PAP_central PF04928.17 NODE_23106_length_890_cov_99.084211_g17920_i0forward_frame_1 - 0.052 12.5 0.1 0.094 11.7 0.1 1.3 1 0 0 1 1 1 0 Poly(A) polymerase central domain Jacalin PF01419.17 NODE_23088_length_890_cov_266.837427_g7054_i1forward_frame_1 - 2.5e-12 46.8 3.3 2.7e-06 27.3 0.2 2.2 2 0 0 2 2 2 2 Jacalin-like lectin domain BRCA2 PF00634.18 NODE_23029_length_892_cov_3.182030_g17854_i0forward_frame_3 - 4.7 7.0 5.5 0.82 9.4 1.4 2.0 2 0 0 2 2 2 0 BRCA2 repeat Abhydro_lipase PF04083.16 NODE_23023_length_892_cov_21.364061_g17848_i0forward_frame_2 - 2.9e-20 71.6 0.2 5.3e-20 70.7 0.2 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_23023_length_892_cov_21.364061_g17848_i0forward_frame_2 - 1.2e-08 34.9 0.1 1.7e-08 34.5 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_23023_length_892_cov_21.364061_g17848_i0forward_frame_2 - 0.0017 17.7 0.0 0.0037 16.6 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 UPF0547 PF10571.9 NODE_22975_length_893_cov_3.768065_g17804_i0reverse_frame_3 - 0.085 13.0 1.6 0.16 12.1 0.1 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 CPP1-like PF11833.8 ORF99336 - 1.7 8.2 5.7 0.22 11.2 0.3 2.2 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF5349 PF17298.2 ORF93367 - 0.47 10.2 2.8 0.51 10.1 0.2 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5349) Ank_2 PF12796.7 ORF92523 - 1.3e-20 73.8 0.2 2.7e-11 43.9 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF92523 - 3.9e-20 71.6 0.9 1e-09 38.4 0.1 3.5 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF92523 - 8.4e-20 70.3 0.1 3.8e-05 23.9 0.0 5.2 6 0 0 6 6 6 3 Ankyrin repeat Ank_3 PF13606.6 ORF92523 - 2.5e-17 61.2 0.1 0.0015 18.8 0.0 6.1 5 1 0 5 5 5 4 Ankyrin repeat Ank_4 PF13637.6 ORF92523 - 3.6e-16 59.3 0.2 0.00041 20.8 0.0 4.6 4 1 1 5 5 5 3 Ankyrin repeats (many copies) C2 PF00168.30 ORF90711 - 1.4e-08 35.0 0.0 2.8e-08 34.0 0.0 1.5 1 0 0 1 1 1 1 C2 domain FerI PF08151.12 ORF90711 - 0.00065 19.7 0.0 0.0013 18.7 0.0 1.5 1 0 0 1 1 1 1 FerI (NUC094) domain SNARE_assoc PF09335.11 ORF86434 - 1.2e-10 41.9 6.1 1.2e-10 41.9 6.1 2.3 2 1 1 3 3 3 1 SNARE associated Golgi protein PIN_5 PF08745.11 ORF86434 - 0.11 11.9 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 PINc domain ribonuclease DUF1657 PF07870.11 ORF83444 - 0.036 13.9 0.0 0.072 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1657) PDZ PF00595.24 ORF83444 - 0.082 13.3 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 PDZ domain DUF4431 PF14485.6 ORF83444 - 0.13 12.1 0.0 0.29 10.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4431) PhyH PF05721.13 ORF83169 - 1.3e-20 74.5 0.0 1.8e-20 74.1 0.0 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Palm_thioest PF02089.15 ORF81396 - 2.6e-57 194.5 0.0 3e-57 194.3 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF81396 - 0.00013 21.6 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF2974 PF11187.8 ORF81396 - 0.025 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 ORF81396 - 0.14 11.4 0.0 0.84 8.8 0.0 1.8 1 1 1 2 2 2 0 Serine aminopeptidase, S33 Pkinase PF00069.25 ORF77728 - 4.4e-61 206.6 0.0 5e-61 206.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF77728 - 7.2e-31 107.4 0.0 9.4e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF77728 - 3.1e-06 26.7 0.0 6.2e-06 25.7 0.0 1.5 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF77728 - 0.031 13.6 0.0 0.056 12.8 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Sam68-YY PF16568.5 ORF77728 - 0.25 12.1 3.5 0.59 10.9 0.9 2.3 2 0 0 2 2 2 0 Tyrosine-rich domain of Sam68 Peptidase_C1 PF00112.23 ORF75663 - 1.7e-23 83.8 0.2 4e-23 82.6 0.2 1.5 1 1 0 1 1 1 1 Papain family cysteine protease AA_permease_2 PF13520.6 ORF69237 - 5.1e-31 107.9 20.2 6.2e-31 107.7 20.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF69237 - 1.9e-11 43.3 20.6 2.9e-11 42.6 20.6 1.3 1 1 0 1 1 1 1 Amino acid permease Rcd1 PF04078.13 ORF68715 - 4.9e-115 383.3 0.3 5.7e-115 383.0 0.3 1.0 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like Palm_thioest PF02089.15 ORF68027 - 2.6e-57 194.5 0.0 3e-57 194.3 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF68027 - 0.00013 21.6 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF2974 PF11187.8 ORF68027 - 0.025 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 ORF68027 - 0.14 11.4 0.0 0.84 8.8 0.0 1.8 1 1 1 2 2 2 0 Serine aminopeptidase, S33 A_deaminase PF00962.22 ORF67681 - 1.7e-46 159.1 0.0 2.1e-46 158.8 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase DHHC PF01529.20 ORF672 - 3.2e-36 124.4 9.0 3.2e-36 124.4 9.0 1.6 2 0 0 2 2 2 1 DHHC palmitoyltransferase Yip1 PF04893.17 ORF672 - 0.15 11.8 5.3 0.38 10.5 5.3 1.6 1 0 0 1 1 1 0 Yip1 domain SRP72 PF08492.12 ORF672 - 0.16 12.4 0.0 0.36 11.3 0.0 1.5 1 0 0 1 1 1 0 SRP72 RNA-binding domain PocR PF10114.9 ORF672 - 7.2 6.4 7.4 13 5.6 7.4 1.3 1 0 0 1 1 1 0 Sensory domain found in PocR TPR_9 PF13371.6 ORF66973 - 0.021 15.0 0.1 0.26 11.5 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF66973 - 0.064 14.1 0.0 0.15 13.0 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat NA37 PF04245.13 ORF65335 - 1.6e-91 307.1 0.0 1.7e-91 306.9 0.0 1.0 1 0 0 1 1 1 1 37-kD nucleoid-associated bacterial protein Macro PF01661.21 ORF64930 - 6.2e-30 103.7 0.0 1.4e-29 102.5 0.0 1.6 1 0 0 1 1 1 1 Macro domain Ydc2-catalyt PF09159.10 ORF64930 - 0.19 11.5 0.1 0.19 11.5 0.1 2.0 2 0 0 2 2 2 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 WD40 PF00400.32 ORF64913 - 7.3e-25 86.8 9.0 3.5e-06 27.6 0.1 5.9 6 0 0 6 6 6 5 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF64913 - 1.4e-10 40.7 3.9 0.011 14.7 0.0 4.1 1 1 3 4 4 4 3 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF64913 - 1.3e-06 27.4 1.3 0.23 10.0 0.0 3.9 2 1 2 4 4 4 4 Nucleoporin Nup120/160 ANAPC4_WD40 PF12894.7 ORF64913 - 0.0016 18.7 0.0 8.6 6.7 0.0 3.8 1 1 3 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF64913 - 0.11 12.5 5.1 1.4 8.9 0.3 3.6 4 0 0 4 4 4 0 WD40-like Beta Propeller Repeat DUF3338 PF11819.8 ORF64913 - 0.31 11.0 0.9 0.6 10.1 0.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3338) Prenyltrans PF00432.21 ORF64879 - 1.2e-38 130.5 15.4 6.3e-13 48.2 3.7 5.1 5 0 0 5 5 5 5 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_C PF13243.6 ORF64879 - 0.0059 15.7 0.0 0.026 13.7 0.0 1.9 1 1 1 2 2 2 2 Squalene-hopene cyclase C-terminal domain SQHop_cyclase_N PF13249.6 ORF64879 - 0.034 13.2 0.0 38 3.2 0.0 3.4 1 1 2 4 4 4 0 Squalene-hopene cyclase N-terminal domain Ras PF00071.22 ORF64683 - 3.2e-21 75.6 0.0 7.1e-21 74.5 0.0 1.5 1 1 0 1 1 1 1 Ras family RsgA_GTPase PF03193.16 ORF64683 - 2.9e-05 24.0 0.0 0.037 13.9 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 ORF64683 - 6.7e-05 23.1 0.0 0.011 16.0 0.0 2.2 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 ORF64683 - 0.00038 19.9 0.0 0.0016 17.9 0.0 1.8 2 0 0 2 2 2 1 Bacterial TniB protein AAA_22 PF13401.6 ORF64683 - 0.0019 18.5 0.0 0.0074 16.6 0.0 1.9 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF64683 - 0.021 15.2 0.1 0.042 14.2 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain Rad60-SLD_2 PF13881.6 ORF64683 - 0.13 12.4 0.0 0.47 10.6 0.0 1.9 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Sigma54_activat PF00158.26 ORF64683 - 0.17 11.6 0.0 0.29 10.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_24 PF13479.6 ORF64683 - 0.17 11.6 0.0 0.3 10.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain PDEase_I PF00233.19 ORF62096 - 2e-51 175.0 2.8 2e-51 175.0 2.8 1.6 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase DUF5444 PF17519.2 ORF62096 - 0.03 14.3 0.0 0.059 13.4 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5444) RCC1_2 PF13540.6 ORF61004 - 4.4e-11 42.3 20.8 0.04 13.7 1.0 6.9 7 0 0 7 7 7 5 Regulator of chromosome condensation (RCC1) repeat Phage_P2_GpU PF06995.11 ORF61004 - 0.00087 18.9 0.4 4.7 6.9 0.1 5.0 4 1 0 4 4 4 1 Phage P2 GpU DUF155 PF02582.14 ORF61004 - 0.72 9.9 6.8 12 6.0 0.2 4.9 4 2 0 4 4 4 0 Uncharacterised ACR, YagE family COG1723 EF-hand_6 PF13405.6 ORF59520 - 0.021 14.7 0.0 0.059 13.3 0.0 1.7 1 0 0 1 1 1 0 EF-hand domain L27_2 PF09045.10 ORF59520 - 0.042 13.8 0.2 0.097 12.6 0.2 1.7 1 0 0 1 1 1 0 L27_2 EF-hand_1 PF00036.32 ORF59520 - 0.047 13.3 0.1 0.15 11.6 0.0 1.9 2 0 0 2 2 2 0 EF hand EF-hand_5 PF13202.6 ORF59520 - 0.058 12.9 0.0 0.14 11.7 0.0 1.7 1 0 0 1 1 1 0 EF hand Crisp PF08562.10 ORF57721 - 0.24 12.0 0.5 0.24 12.0 0.5 3.3 3 0 0 3 3 3 0 Crisp Citrate_synt PF00285.21 ORF54724 - 7.5e-95 318.0 0.0 8.5e-95 317.9 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain SecD-TM1 PF13721.6 ORF54010 - 0.015 15.7 0.2 2.3 8.7 0.0 3.1 2 1 1 3 3 3 0 SecD export protein N-terminal TM region PFK PF00365.20 ORF54010 - 0.064 12.6 0.0 0.097 12.0 0.0 1.4 1 0 0 1 1 1 0 Phosphofructokinase Ribosomal_L4 PF00573.22 ORF48873 - 1.1e-27 97.0 0.1 1.5e-27 96.5 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family RCC1_2 PF13540.6 ORF48722 - 7.1e-12 44.8 18.7 0.033 14.0 1.0 6.9 7 0 0 7 7 7 5 Regulator of chromosome condensation (RCC1) repeat Phage_P2_GpU PF06995.11 ORF48722 - 0.0019 17.8 0.3 7 6.3 0.0 4.7 5 1 0 5 5 5 1 Phage P2 GpU FtsQ PF03799.15 ORF48722 - 0.0093 16.8 0.2 37 5.2 0.0 4.4 1 1 5 6 6 6 1 Cell division protein FtsQ DUF155 PF02582.14 ORF48722 - 0.21 11.7 8.3 13 5.9 0.1 5.4 4 2 1 5 5 5 0 Uncharacterised ACR, YagE family COG1723 Hydrolase_4 PF12146.8 ORF47610 - 1.7e-31 109.3 0.0 3.4e-31 108.4 0.0 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF47610 - 9.6e-06 25.4 0.0 0.00083 19.1 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF47610 - 0.0009 19.9 0.0 0.0011 19.7 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF47610 - 0.0029 17.1 0.0 0.1 12.1 0.0 2.5 1 1 0 1 1 1 1 Prolyl oligopeptidase family TraF PF13728.6 ORF47610 - 0.079 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein IHO1 PF15771.5 ORF47150 - 0.0027 16.5 2.5 0.0048 15.7 2.5 1.3 1 0 0 1 1 1 1 Interactor of HORMAD1 protein 1 Peptidase_S10 PF00450.22 ORF46737 - 1.3e-38 133.5 0.0 1.5e-38 133.3 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase FAD_binding_7 PF03441.14 ORF43224 - 4.7e-21 75.2 0.4 2e-20 73.1 0.4 1.8 1 1 0 1 1 1 1 FAD binding domain of DNA photolyase zf-RanBP PF00641.18 ORF43224 - 1.4e-06 27.5 5.0 1.4e-06 27.5 5.0 2.4 3 0 0 3 3 3 1 Zn-finger in Ran binding protein and others OrfB_Zn_ribbon PF07282.11 ORF43224 - 0.0098 15.8 0.0 0.0098 15.8 0.0 2.0 2 1 1 3 3 3 1 Putative transposase DNA-binding domain DZR PF12773.7 ORF43224 - 0.24 11.5 10.8 0.77 9.8 10.8 1.8 1 1 0 1 1 1 0 Double zinc ribbon zf-B_box PF00643.24 ORF43224 - 0.97 9.6 8.3 1.2 9.3 0.2 2.4 2 0 0 2 2 2 0 B-box zinc finger ArfGap PF01412.18 ORF43224 - 1.3 9.2 10.3 0.45 10.6 1.0 2.3 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf Asp_protease_2 PF13650.6 ORF40909 - 1.5e-16 60.8 1.4 5.5e-10 39.8 0.1 3.2 2 1 0 2 2 2 2 Aspartyl protease gag-asp_proteas PF13975.6 ORF40909 - 7.9e-14 52.0 0.3 2e-06 28.3 0.0 3.5 3 1 0 3 3 3 2 gag-polyprotein putative aspartyl protease H_PPase PF03030.16 ORF40202 - 2.3e-97 327.2 4.2 2.6e-97 327.1 4.2 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase UPF0182 PF03699.13 ORF40202 - 0.21 9.7 1.0 0.22 9.6 1.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) Pex24p PF06398.11 ORF40202 - 0.94 8.4 2.4 0.55 9.2 0.6 1.4 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin Dak2 PF02734.17 ORF3999 - 3.7e-39 134.4 2.2 7.2e-39 133.5 1.6 1.7 2 0 0 2 2 2 1 DAK2 domain Dak1 PF02733.17 ORF3999 - 2.3e-05 23.4 0.1 4.8e-05 22.4 0.0 1.5 2 0 0 2 2 2 1 Dak1 domain AP_endonuc_2 PF01261.24 ORF37637 - 1.4e-36 126.0 0.0 1.7e-36 125.7 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UxuA PF03786.13 ORF37637 - 0.018 13.9 0.0 0.026 13.4 0.0 1.2 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Glyco_hydro_114 PF03537.13 ORF37637 - 0.019 14.3 0.8 0.046 13.0 0.2 1.9 3 0 0 3 3 3 0 Glycoside-hydrolase family GH114 Methyltransf_11 PF08241.12 ORF37637 - 0.11 13.2 0.0 0.54 10.9 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain PRMT5_TIM PF17285.2 ORF37637 - 0.15 11.2 0.0 0.23 10.6 0.0 1.2 1 0 0 1 1 1 0 PRMT5 TIM barrel domain Citrate_synt PF00285.21 ORF35859 - 7.5e-95 318.0 0.0 8.5e-95 317.9 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain SMP_LBD PF17047.5 ORF34504 - 0.084 12.3 0.2 0.19 11.2 0.3 1.5 2 0 0 2 2 2 0 Synaptotagmin-like mitochondrial-lipid-binding domain DUF2120 PF09893.9 ORF34504 - 0.14 12.3 0.9 0.21 11.7 0.1 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) Clathrin_lg_ch PF01086.17 ORF32167 - 6.2e-09 36.2 28.7 2e-08 34.6 28.7 1.8 1 1 0 1 1 1 1 Clathrin light chain Paz_1 PF18349.1 ORF32167 - 0.023 14.7 1.5 0.05 13.6 1.5 1.7 1 0 0 1 1 1 0 PAZ domain KRAB PF01352.27 ORF32167 - 0.28 10.9 1.7 1.8 8.3 0.0 2.4 2 0 0 2 2 2 0 KRAB box DNA_pol3_tau_5 PF12170.8 ORF29962 - 1.6e-59 200.0 4.9 2.3e-59 199.5 4.9 1.3 1 0 0 1 1 1 1 DNA polymerase III tau subunit V interacting with alpha DNA_pol3_tau_4 PF12168.8 ORF29962 - 6.9e-21 74.6 12.2 6.9e-21 74.6 12.2 2.1 2 0 0 2 2 2 1 DNA polymerase III subunits tau domain IV DnaB-binding TFIIA PF03153.13 ORF29962 - 7.1 6.5 12.5 9 6.2 12.5 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Citrate_synt PF00285.21 ORF28942 - 7.5e-95 318.0 0.0 8.5e-95 317.9 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF1631 PF07793.11 ORF2690 - 0.012 14.1 3.5 0.014 13.9 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) NAM-associated PF14303.6 ORF2690 - 0.71 10.6 4.3 1.1 10.0 4.3 1.2 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain Memo PF01875.17 ORF23151 - 3.3e-82 275.7 0.1 3.8e-82 275.5 0.1 1.0 1 0 0 1 1 1 1 Memo-like protein MORN PF02493.20 ORF20249 - 2.1e-22 77.6 26.4 0.00043 20.0 0.1 9.1 9 0 0 9 9 9 8 MORN repeat Tudor_2 PF18104.1 ORF20249 - 0.11 12.2 0.5 8.3 6.2 0.0 2.7 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain MMPL PF03176.15 ORF19611 - 4.7e-30 104.7 12.1 8.2e-30 103.9 12.1 1.3 1 1 0 1 1 1 1 MMPL family SAPS PF04499.15 ORF19507 - 0.015 14.2 2.0 0.014 14.2 2.0 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Zip PF02535.22 ORF19507 - 0.12 11.6 6.7 0.17 11.0 6.7 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter TMEM208_SND2 PF05620.11 ORF19507 - 0.24 11.2 0.9 0.54 10.0 0.9 1.5 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 V_ATPase_I PF01496.19 ORF19507 - 2.6 5.9 6.4 3.4 5.5 6.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF913 PF06025.12 ORF19507 - 3.2 6.6 7.9 4 6.3 7.3 1.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) Metallophos PF00149.28 ORF15075 - 0.00053 20.6 0.1 0.00081 19.9 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PCSK9_C1 PF18459.1 ORF15075 - 0.0046 17.1 0.0 0.0084 16.2 0.0 1.4 1 0 0 1 1 1 1 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Fmp27_WPPW PF10359.9 ORF13007 - 0.036 12.9 1.5 0.047 12.5 1.5 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Suppressor_APC PF11414.8 ORF13007 - 0.5 10.5 7.8 2.3 8.4 7.8 2.1 1 1 0 1 1 1 0 Adenomatous polyposis coli tumour suppressor protein Palm_thioest PF02089.15 ORF110067 - 2.6e-57 194.5 0.0 3e-57 194.3 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF110067 - 0.00013 21.6 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF2974 PF11187.8 ORF110067 - 0.025 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 ORF110067 - 0.14 11.4 0.0 0.84 8.8 0.0 1.8 1 1 1 2 2 2 0 Serine aminopeptidase, S33 Peptidase_C26 PF07722.13 ORF109674 - 1.9e-17 63.7 0.0 3e-17 63.1 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF109674 - 4.8e-07 29.7 0.0 2.4e-06 27.4 0.0 2.1 2 1 0 2 2 2 1 Glutamine amidotransferase class-I GATase_5 PF13507.6 ORF109674 - 0.027 13.6 0.0 0.049 12.7 0.0 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Colicin_D PF11429.8 ORF109674 - 0.07 13.6 0.1 0.2 12.1 0.1 1.7 1 0 0 1 1 1 0 Colicin D WWE PF02825.20 ORF109674 - 0.33 11.6 1.7 1.1 9.9 0.6 2.2 2 0 0 2 2 2 0 WWE domain PsbQ PF05757.11 ORF10782 - 0.04 13.6 0.8 0.061 13.1 0.8 1.2 1 0 0 1 1 1 0 Oxygen evolving enhancer protein 3 (PsbQ) DUF4404 PF14357.6 ORF10782 - 0.18 12.5 0.0 0.4 11.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) Adeno_PIX PF03955.14 ORF10782 - 4.8 7.4 7.7 0.24 11.6 1.5 1.9 2 0 0 2 2 2 0 Adenovirus hexon-associated protein (IX) LRR_6 PF13516.6 ORF10396 - 1.9e-09 36.8 0.5 0.038 14.0 0.0 4.8 5 0 0 5 5 5 2 Leucine Rich repeat LRR_4 PF12799.7 ORF10396 - 0.0057 17.1 0.0 3.9 8.0 0.0 3.4 3 0 0 3 3 3 1 Leucine Rich repeats (2 copies) bMG1 PF17970.1 ORF10396 - 0.088 12.9 0.1 0.63 10.1 0.0 2.2 2 0 0 2 2 2 0 Bacterial Alpha-2-macroglobulin MG1 domain Peptidase_C26 PF07722.13 ORF10038 - 1.9e-17 63.7 0.0 3e-17 63.1 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF10038 - 4.8e-07 29.7 0.0 2.4e-06 27.4 0.0 2.1 2 1 0 2 2 2 1 Glutamine amidotransferase class-I GATase_5 PF13507.6 ORF10038 - 0.027 13.6 0.0 0.049 12.7 0.0 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Colicin_D PF11429.8 ORF10038 - 0.07 13.6 0.1 0.2 12.1 0.1 1.7 1 0 0 1 1 1 0 Colicin D WWE PF02825.20 ORF10038 - 0.33 11.6 1.7 1.1 9.9 0.6 2.2 2 0 0 2 2 2 0 WWE domain Branch_AA_trans PF05525.13 NODE_23235_length_886_cov_4.158637_g18026_i0reverse_frame_1 - 1.5e-63 215.2 17.0 2.2e-63 214.7 17.0 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport protein Glyco_hydro_31 PF01055.26 NODE_23219_length_886_cov_480.601645_g17728_i2reverse_frame_1 - 1.7e-53 182.4 1.6 2e-53 182.2 1.6 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Glyco_hydro_31 PF01055.26 NODE_23217_length_886_cov_573.963572_g17728_i1reverse_frame_1 - 7.3e-55 186.9 2.0 8.6e-55 186.7 2.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 NOA36 PF06524.12 NODE_23117_length_890_cov_3.423392_g17931_i0forward_frame_3 - 6.1 6.1 13.9 3.3 7.0 11.7 1.5 1 1 0 1 1 1 0 NOA36 protein PP2C PF00481.21 NODE_23116_length_890_cov_5.270175_g17930_i0reverse_frame_3 - 7.9e-09 35.5 0.0 1e-08 35.1 0.0 1.3 1 0 0 1 1 1 1 Protein phosphatase 2C Adeno_terminal PF02459.15 NODE_23116_length_890_cov_5.270175_g17930_i0forward_frame_2 - 0.32 9.4 2.4 0.43 8.9 2.4 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein MyTH4 PF00784.17 NODE_23107_length_890_cov_98.398830_g17921_i0reverse_frame_2 - 3.1e-16 59.8 0.1 8.7e-16 58.4 0.0 1.8 2 0 0 2 2 2 1 MyTH4 domain RD3 PF14473.6 NODE_23107_length_890_cov_98.398830_g17921_i0reverse_frame_2 - 0.029 14.2 0.2 1.8 8.4 0.0 2.3 2 0 0 2 2 2 0 RD3 protein DUF1622 PF07784.11 NODE_23088_length_890_cov_266.837427_g7054_i1forward_frame_2 - 0.02 14.8 1.4 0.032 14.1 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1622) Sec6 PF06046.13 NODE_23070_length_891_cov_4.282710_g17891_i0reverse_frame_2 - 2.9e-19 68.9 14.0 4.2e-19 68.4 14.0 1.2 1 0 0 1 1 1 1 Exocyst complex component Sec6 p450 PF00067.22 ORF9874 - 1.2e-10 40.8 1.4 1.4e-10 40.5 1.4 1.1 1 0 0 1 1 1 1 Cytochrome P450 tRNA-synt_1d PF00750.19 ORF92261 - 2.8e-44 151.5 0.0 4.3e-44 150.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF92261 - 8.4e-28 96.9 0.1 1.9e-27 95.8 0.1 1.6 1 0 0 1 1 1 1 DALR anticodon binding domain Jacalin PF01419.17 ORF85137 - 3.3e-15 56.2 1.8 4.2e-08 33.2 0.6 2.4 2 0 0 2 2 2 2 Jacalin-like lectin domain CSRNP_N PF16019.5 ORF84435 - 6.9 6.5 10.3 0.18 11.7 3.7 1.6 2 0 0 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus T3SS_ExsE PF18286.1 ORF84020 - 0.011 15.6 0.1 0.021 14.8 0.1 1.4 1 0 0 1 1 1 0 Type III secretion system ExsE FlxA PF14282.6 ORF81818 - 0.31 11.0 6.2 1.8 8.6 2.5 2.7 2 1 0 2 2 2 0 FlxA-like protein DUF1664 PF07889.12 ORF81818 - 0.51 10.4 12.6 3.1 7.8 1.1 3.3 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DASH_Dam1 PF08653.10 ORF81818 - 1.2 9.0 7.0 8.1 6.3 0.3 3.3 3 1 0 3 3 3 0 DASH complex subunit Dam1 DUF724 PF05266.14 ORF81818 - 1.8 8.3 10.6 0.2 11.5 1.7 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF724) PDEase_I PF00233.19 ORF81724 - 4.5e-44 150.9 8.0 8e-44 150.1 8.0 1.4 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase VPS9 PF02204.18 ORF81724 - 0.02 15.1 0.4 0.037 14.2 0.4 1.5 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain adh_short PF00106.25 ORF80154 - 1.2e-06 28.2 0.0 0.00014 21.4 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase Octopine_DH PF02317.17 ORF80154 - 0.2 11.7 0.0 0.31 11.1 0.0 1.2 1 0 0 1 1 1 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Abhydrolase_2 PF02230.16 ORF7899 - 1.2e-06 28.5 0.0 2.8e-06 27.3 0.0 1.6 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase DUF2974 PF11187.8 ORF7899 - 0.015 14.9 0.0 0.019 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Cutinase PF01083.22 ORF7899 - 0.018 15.0 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Cutinase PE-PPE PF08237.11 ORF7899 - 0.026 14.1 0.0 0.037 13.6 0.0 1.2 1 0 0 1 1 1 0 PE-PPE domain DUF3089 PF11288.8 ORF7899 - 0.12 11.9 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) Hydrolase_4 PF12146.8 ORF7899 - 0.14 11.4 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Lipase_3 PF01764.25 ORF7899 - 0.16 11.8 0.0 0.65 9.9 0.0 2.0 1 1 0 1 1 1 0 Lipase (class 3) Peripla_BP_1 PF00532.21 ORF77324 - 2.7e-14 53.3 0.0 3.3e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 ORF77324 - 5.2e-11 43.2 0.1 1.1e-09 38.9 0.0 2.1 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 ORF77324 - 1.4e-09 37.9 0.0 1.7e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain DUF4543 PF15076.6 ORF77324 - 0.0021 18.2 0.8 0.0056 16.8 0.2 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4543) LysR_substrate PF03466.20 ORF77324 - 0.015 14.7 1.7 3.1 7.1 0.0 3.1 2 1 1 3 3 3 0 LysR substrate binding domain Zip PF02535.22 ORF7730 - 1.2 8.2 9.9 1.9 7.6 9.9 1.3 1 1 0 1 1 1 0 ZIP Zinc transporter Bax1-I PF01027.20 ORF76951 - 5e-28 98.3 35.1 6.4e-28 98.0 35.1 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 tRNA-synt_1d PF00750.19 ORF75428 - 2.8e-44 151.5 0.0 4.3e-44 150.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF75428 - 8.4e-28 96.9 0.1 1.9e-27 95.8 0.1 1.6 1 0 0 1 1 1 1 DALR anticodon binding domain CSRNP_N PF16019.5 ORF74976 - 6.9 6.5 10.3 0.18 11.7 3.7 1.6 2 0 0 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus PDEase_I PF00233.19 ORF72158 - 4.5e-44 150.9 8.0 8e-44 150.1 8.0 1.4 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase VPS9 PF02204.18 ORF72158 - 0.02 15.1 0.4 0.037 14.2 0.4 1.5 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain IQ PF00612.27 ORF63954 - 2.1e-10 39.4 41.2 0.0049 16.6 3.8 6.2 5 0 0 5 5 5 5 IQ calmodulin-binding motif Asp_protease_2 PF13650.6 ORF63929 - 0.19 12.4 0.0 0.44 11.2 0.0 1.7 1 0 0 1 1 1 0 Aspartyl protease ANAPC3 PF12895.7 ORF63137 - 0.011 15.9 3.5 0.31 11.3 0.2 3.0 3 0 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 MIOX PF05153.15 ORF63137 - 0.027 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Myo-inositol oxygenase TPR_19 PF14559.6 ORF63137 - 0.35 11.4 4.1 1.5 9.4 0.3 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF63137 - 5.1 8.0 10.9 0.97 10.2 1.2 3.7 2 1 1 3 3 3 0 Tetratricopeptide repeat PAP2_C PF14360.6 ORF62714 - 8.8e-07 29.4 3.3 8.8e-07 29.4 3.3 3.4 3 1 1 4 4 4 1 PAP2 superfamily C-terminal DUF2207 PF09972.9 ORF62714 - 0.068 11.9 0.3 0.11 11.3 0.3 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PAP2_3 PF14378.6 ORF62714 - 0.095 12.4 20.4 0.5 10.0 15.1 3.0 1 1 1 2 2 2 0 PAP2 superfamily Porin_8 PF16966.5 ORF62538 - 3.5e-144 480.3 21.4 3.9e-144 480.1 21.4 1.0 1 0 0 1 1 1 1 Porin-like glycoporin RafY Cupin_1 PF00190.22 ORF60031 - 5.7e-15 55.2 0.4 9.5e-15 54.5 0.4 1.3 1 0 0 1 1 1 1 Cupin Cupin_2 PF07883.11 ORF60031 - 3.1e-08 33.2 0.1 6.5e-08 32.2 0.1 1.5 1 0 0 1 1 1 1 Cupin domain ARD PF03079.14 ORF60031 - 0.078 13.2 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 ARD/ARD' family AraC_binding PF02311.19 ORF60031 - 0.085 12.8 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain COPIIcoated_ERV PF07970.12 ORF57328 - 3.7e-27 95.6 0.1 5.7e-27 95.0 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter Thioredoxin PF00085.20 ORF57328 - 2.9e-15 56.1 0.0 7.8e-15 54.7 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF57328 - 0.0046 17.3 0.0 0.012 15.9 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF57328 - 0.017 14.5 0.0 0.049 13.0 0.0 1.7 1 1 1 2 2 2 0 OST3 / OST6 family, transporter family Kp4 PF09044.10 ORF57328 - 0.13 12.3 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Kp4 AATase PF07247.12 ORF55586 - 1.3e-06 27.3 1.0 1.3e-06 27.3 1.0 1.8 1 1 1 2 2 2 1 Alcohol acetyltransferase WES_acyltransf PF03007.16 ORF55586 - 3e-05 23.9 0.0 4.5e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Cupin_8 PF13621.6 ORF54388 - 8.1e-10 38.8 0.1 1.7e-09 37.7 0.1 1.5 1 1 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF54388 - 1.8e-05 24.4 0.0 3.5e-05 23.4 0.0 1.5 1 1 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF54388 - 0.00036 20.9 0.0 0.0024 18.3 0.0 2.1 2 0 0 2 2 2 1 JmjC domain, hydroxylase Cupin_2 PF07883.11 ORF54388 - 0.0024 17.6 0.1 0.0088 15.7 0.0 2.0 2 0 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 ORF54388 - 0.0045 16.6 0.0 0.0067 16.0 0.0 1.4 1 0 0 1 1 1 1 Cupin DUF4383 PF14325.6 ORF48032 - 0.077 13.3 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4383) Peripla_BP_4 PF13407.6 ORF47823 - 2.1e-58 198.0 11.8 2.4e-58 197.7 11.8 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 ORF47823 - 5.8e-27 94.8 2.4 7e-27 94.6 2.4 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 ORF47823 - 5.4e-16 59.4 0.1 2.7e-15 57.1 0.1 1.9 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_6 PF13458.6 ORF47823 - 2.1e-12 47.4 5.9 2.7e-12 47.0 4.8 1.6 1 1 1 2 2 2 1 Periplasmic binding protein PucR PF07905.11 ORF47823 - 0.0094 16.2 0.0 0.12 12.7 0.0 2.3 1 1 1 2 2 2 1 Purine catabolism regulatory protein-like family tRNA-synt_1d PF00750.19 ORF47133 - 2.8e-44 151.5 0.0 4.3e-44 150.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF47133 - 8.4e-28 96.9 0.1 1.9e-27 95.8 0.1 1.6 1 0 0 1 1 1 1 DALR anticodon binding domain PgdA_N PF18627.1 ORF45773 - 0.031 13.9 1.3 0.052 13.2 1.3 1.3 1 0 0 1 1 1 0 Peptidoglycan GlcNAc deacetylase N-terminal domain SPATA48 PF15073.6 ORF42440 - 0.055 13.8 1.3 0.36 11.1 0.0 2.3 2 0 0 2 2 2 0 Spermatogenesis-associated protein 48 MTHFR PF02219.17 ORF42312 - 1.3e-108 362.7 0.0 1.4e-108 362.6 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase BPD_transp_1 PF00528.22 ORF41012 - 1.9e-18 66.9 14.4 1.9e-18 66.9 14.4 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 ORF41012 - 3.3e-10 39.8 5.2 1.7e-09 37.5 0.0 3.3 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C Chal_sti_synt_N PF00195.19 ORF41012 - 0.038 13.4 0.0 0.098 12.1 0.0 1.6 2 0 0 2 2 2 0 Chalcone and stilbene synthases, N-terminal domain Kelch_6 PF13964.6 ORF37206 - 2.7e-42 141.7 2.9 3.4e-09 36.7 0.0 6.4 3 2 3 6 6 6 6 Kelch motif Kelch_1 PF01344.25 ORF37206 - 2.2e-40 136.0 16.9 1.8e-11 43.4 0.2 6.7 6 1 0 6 6 6 5 Kelch motif Kelch_3 PF13415.6 ORF37206 - 6.8e-21 74.1 7.4 3.5e-05 24.0 0.1 6.0 6 0 0 6 6 6 5 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF37206 - 3.3e-16 58.5 4.0 0.028 14.4 0.1 6.2 6 0 0 6 6 6 5 Kelch motif Kelch_4 PF13418.6 ORF37206 - 3.9e-12 46.0 5.3 0.031 14.3 0.0 5.9 6 1 0 6 6 6 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF37206 - 3.2e-11 42.9 3.6 0.0041 17.1 0.2 4.9 5 0 0 5 5 5 3 Kelch motif DUF1668 PF07893.13 ORF37206 - 0.00097 18.6 0.4 0.2 11.0 0.1 2.8 1 1 2 3 3 3 2 Protein of unknown function (DUF1668) SHIPPO-rpt PF07004.12 ORF36990 - 0.0028 18.5 39.3 0.2 12.6 1.2 6.6 7 0 0 7 7 7 4 Sperm-tail PG-rich repeat DnaJ-X PF14308.6 ORF33843 - 2e-14 53.6 0.7 2e-14 53.6 0.7 2.0 1 1 1 2 2 2 1 X-domain of DnaJ-containing Tower PF09121.10 ORF33843 - 0.75 10.0 6.9 0.088 13.0 2.4 1.8 2 0 0 2 2 2 0 Tower Abhydrolase_3 PF07859.13 ORF33436 - 5.1e-18 65.7 0.1 3.7e-17 62.9 0.1 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 ORF33436 - 9.8e-13 48.1 0.0 7.4e-09 35.4 0.0 2.1 2 0 0 2 2 2 2 Prolyl oligopeptidase family COesterase PF00135.28 ORF33436 - 1.2e-08 34.3 0.2 2.5e-08 33.3 0.2 1.5 1 1 0 1 1 1 1 Carboxylesterase family Hydrolase_4 PF12146.8 ORF33436 - 3.2e-05 23.3 0.0 0.0057 16.0 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 ORF33436 - 0.00023 20.8 0.0 0.00043 19.9 0.0 1.4 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_2 PF02230.16 ORF33436 - 0.0014 18.5 0.0 0.037 13.8 0.0 2.1 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.20 ORF33436 - 0.0018 18.0 0.1 1.4 8.5 0.2 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF33436 - 0.023 14.8 0.0 0.041 14.0 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein Esterase_phd PF10503.9 ORF33436 - 0.039 13.4 0.8 14 5.1 0.0 3.2 3 1 0 3 3 3 0 Esterase PHB depolymerase Pkinase PF00069.25 ORF29206 - 6.6e-28 97.8 0.1 1.5e-27 96.6 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain EF-hand_1 PF00036.32 ORF29206 - 1.1e-17 62.2 5.6 4.4e-05 22.7 0.0 3.8 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF29206 - 6.8e-16 58.5 4.4 3.6e-12 46.5 0.1 2.8 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF29206 - 8.1e-15 53.4 6.8 0.00011 21.9 0.1 3.8 3 0 0 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 ORF29206 - 3.4e-14 51.6 3.6 0.00015 21.1 0.0 3.6 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF29206 - 2.5e-10 40.0 3.5 1.4e-08 34.4 0.2 2.9 2 0 0 2 2 2 1 EF-hand domain pair Pkinase_Tyr PF07714.17 ORF29206 - 6.6e-09 35.4 0.1 1.5e-08 34.3 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase SPARC_Ca_bdg PF10591.9 ORF29206 - 6.8e-06 26.4 3.4 0.00015 22.0 1.1 2.8 2 1 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EFhand_Ca_insen PF08726.10 ORF29206 - 3.7e-05 23.7 0.0 9.5e-05 22.4 0.0 1.7 1 0 0 1 1 1 1 Ca2+ insensitive EF hand EF-hand_4 PF12763.7 ORF29206 - 0.003 17.5 0.5 0.0072 16.3 0.5 1.7 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF29206 - 0.0094 15.9 0.2 1.7 8.6 0.0 2.8 2 1 1 3 3 3 1 Caleosin related protein EF-hand_9 PF14658.6 ORF29206 - 0.019 15.3 0.1 0.21 12.0 0.1 2.6 3 0 0 3 3 3 0 EF-hand domain DUF2073 PF09846.9 ORF29206 - 0.083 12.8 2.7 0.73 9.7 0.2 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2073) Acetyltransf_16 PF05301.11 ORF28459 - 8.4e-47 159.2 0.6 1.3e-46 158.6 0.6 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Acetyltransf_7 PF13508.7 ORF28459 - 0.0097 16.3 0.0 0.041 14.3 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF28459 - 0.016 15.1 0.0 0.052 13.5 0.0 1.8 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 ORF28459 - 0.13 12.3 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Transposase_31 PF04754.12 ORF27861 - 2.4e-90 301.6 0.1 3.1e-90 301.3 0.1 1.1 1 0 0 1 1 1 1 Putative transposase, YhgA-like NepR PF18557.1 ORF27861 - 0.033 13.8 0.4 0.67 9.6 0.1 2.7 2 0 0 2 2 2 0 Anti-sigma factor NepR p450 PF00067.22 ORF27352 - 7.9e-49 166.6 0.0 9.5e-49 166.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Pyr_redox_2 PF07992.14 ORF26285 - 3.6e-06 26.4 0.0 0.00087 18.6 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF26285 - 1.7e-05 24.3 0.0 0.00066 19.0 0.0 2.1 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF26285 - 0.00014 22.4 0.0 0.00042 20.8 0.0 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF26285 - 0.0028 17.3 0.2 0.64 9.5 0.1 2.1 1 1 1 2 2 2 2 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 ORF26285 - 0.0038 17.6 0.0 0.0079 16.6 0.0 1.5 1 1 0 1 1 1 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 ORF26285 - 0.0052 16.1 0.0 0.01 15.1 0.0 1.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain K_oxygenase PF13434.6 ORF26285 - 0.016 14.4 0.0 0.02 14.1 0.0 1.1 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) FAD_oxidored PF12831.7 ORF26285 - 0.055 12.8 0.2 0.091 12.1 0.2 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase GIDA PF01134.22 ORF26285 - 0.11 11.5 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Peptidase_C1 PF00112.23 ORF24436 - 1.7e-30 106.8 1.6 2.7e-30 106.1 1.6 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF24436 - 0.19 10.5 1.1 0.33 9.7 1.1 1.3 1 0 0 1 1 1 0 Peptidase C1-like family Anoctamin PF04547.12 ORF2424 - 1.8e-14 53.4 7.0 2.4e-14 53.0 7.0 1.2 1 0 0 1 1 1 1 Calcium-activated chloride channel DUF2206 PF09971.9 ORF2424 - 0.043 12.6 2.1 2.5 6.8 0.0 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2206) TPR_20 PF14561.6 ORF24235 - 1.9e-28 98.6 15.5 3.3e-28 97.8 5.2 3.3 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF24235 - 7.3e-20 71.3 15.1 4.5e-19 68.7 1.5 3.2 3 0 0 3 3 2 2 Tetratricopeptide repeat Thioredoxin PF00085.20 ORF24235 - 4.7e-19 68.3 0.0 9.1e-19 67.4 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin ANAPC3 PF12895.7 ORF24235 - 6.2e-06 26.4 0.9 0.00037 20.7 0.1 2.6 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TraF PF13728.6 ORF24235 - 1e-05 25.5 1.2 1.8e-05 24.7 0.1 1.9 2 0 0 2 2 2 1 F plasmid transfer operon protein OST3_OST6 PF04756.13 ORF24235 - 4.7e-05 22.9 0.1 6.5e-05 22.4 0.1 1.2 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 ORF24235 - 0.00046 20.5 0.0 0.0096 16.2 0.0 2.5 1 1 1 2 2 2 1 Thioredoxin-like TPR_4 PF07721.14 ORF24235 - 0.0013 19.2 6.4 0.4 11.4 0.1 3.1 2 0 0 2 2 2 2 Tetratricopeptide repeat Thioredoxin_6 PF13848.6 ORF24235 - 0.0019 18.1 0.0 0.003 17.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain TetR_C_31 PF17940.1 ORF24235 - 0.007 16.6 4.6 0.25 11.6 2.4 3.1 2 1 1 3 3 3 1 Tetracyclin repressor-like, C-terminal domain Thioredoxin_2 PF13098.6 ORF24235 - 0.026 15.0 0.0 0.069 13.6 0.0 1.8 1 0 0 1 1 1 0 Thioredoxin-like domain TPR_12 PF13424.6 ORF24235 - 0.027 14.8 3.7 3.4 8.0 0.3 3.1 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF24235 - 0.03 15.1 11.6 8 7.6 0.2 5.3 2 1 3 5 5 5 0 Tetratricopeptide repeat HyaE PF07449.11 ORF24235 - 0.039 13.9 0.0 0.093 12.7 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE TPR_5 PF12688.7 ORF24235 - 0.058 13.6 7.1 0.074 13.3 0.8 3.0 1 1 1 3 3 3 0 Tetratrico peptide repeat HrpB1_HrpK PF09613.10 ORF24235 - 0.07 12.8 4.3 0.14 11.8 0.5 2.4 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) TPR_10 PF13374.6 ORF24235 - 0.56 10.2 3.5 17 5.5 0.5 4.0 3 2 2 5 5 5 0 Tetratricopeptide repeat Zip PF02535.22 ORF226 - 0.58 9.3 5.3 0.69 9.1 5.3 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Menin PF05053.13 ORF226 - 1.4 7.1 8.5 1.9 6.7 8.5 1.1 1 0 0 1 1 1 0 Menin Paramyxo_ncap PF00973.19 ORF226 - 2.2 7.1 11.5 3.3 6.5 11.5 1.2 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Presenilin PF01080.17 ORF226 - 4.6 5.9 11.8 6.2 5.5 11.8 1.1 1 0 0 1 1 1 0 Presenilin Glyco_hydro_18 PF00704.28 ORF20209 - 3e-61 207.8 0.0 3.8e-61 207.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 Glyco_hydro_114 PF03537.13 ORF20209 - 0.13 11.6 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 Glycoside-hydrolase family GH114 Peptidase_C1 PF00112.23 ORF15449 - 2.6e-57 194.4 8.1 3.3e-57 194.1 8.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF15449 - 0.0039 16.0 0.3 0.31 9.7 0.1 2.1 2 0 0 2 2 2 2 Peptidase C1-like family PgdA_N PF18627.1 ORF15318 - 0.031 13.9 1.3 0.052 13.2 1.3 1.3 1 0 0 1 1 1 0 Peptidoglycan GlcNAc deacetylase N-terminal domain Pkinase PF00069.25 ORF13228 - 4.8e-61 206.4 0.0 5.4e-61 206.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13228 - 6.4e-29 101.0 0.0 7.6e-29 100.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_C PF00433.24 ORF13228 - 0.00053 20.6 0.3 0.0012 19.5 0.3 1.6 1 1 0 1 1 1 1 Protein kinase C terminal domain Kinase-like PF14531.6 ORF13228 - 0.08 12.2 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Pkinase_fungal PF17667.1 ORF13228 - 0.092 11.5 0.0 0.13 11.0 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase HA2 PF04408.23 ORF11749 - 2.3e-19 69.6 0.1 7.1e-19 68.1 0.1 1.9 1 1 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 ORF11749 - 4.3e-18 65.4 0.0 7.3e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold PPR_2 PF13041.6 ORF11659 - 5.3e-12 45.7 0.0 8.6e-06 25.8 0.0 4.1 3 1 1 4 4 4 3 PPR repeat family PPR PF01535.20 ORF11659 - 2.2e-09 36.9 0.3 5.4e-05 23.2 0.0 4.6 4 1 0 4 4 4 1 PPR repeat PPR_3 PF13812.6 ORF11659 - 1.6e-08 34.5 0.0 0.0015 18.6 0.0 2.8 2 1 1 3 3 3 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF11659 - 1.3e-07 31.2 0.0 1.8e-05 24.3 0.0 3.6 4 0 0 4 4 4 1 PPR repeat PPR_long PF17177.4 ORF11659 - 1.5e-06 27.8 0.5 0.0016 17.8 0.1 2.3 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP ATP13 PF12921.7 ORF11659 - 0.02 14.8 0.1 0.055 13.3 0.1 1.8 1 1 0 1 1 1 0 Mitochondrial ATPase expression NIT PF08376.10 ORF11659 - 0.032 14.7 4.3 0.044 14.3 4.3 1.3 1 0 0 1 1 1 0 Nitrate and nitrite sensing TPR_14 PF13428.6 ORF11659 - 0.17 12.8 2.4 20 6.3 0.7 3.4 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF11659 - 0.69 10.6 6.2 0.36 11.5 0.7 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat UbiA PF01040.18 ORF109161 - 1e-59 201.9 21.2 1.3e-59 201.6 21.2 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF3040 PF11239.8 ORF109161 - 0.012 15.9 0.5 0.012 15.9 0.5 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3040) Gly-zipper_OmpA PF13436.6 ORF109161 - 0.051 13.4 0.1 0.12 12.2 0.1 1.6 1 0 0 1 1 1 0 Glycine-zipper domain COX14 PF14880.6 ORF109161 - 0.22 11.4 0.0 0.22 11.4 0.0 3.9 3 1 0 3 3 3 0 Cytochrome oxidase c assembly ETRAMP PF09716.10 ORF109161 - 0.74 9.9 3.8 15 5.8 0.0 2.8 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) tRNA-synt_1d PF00750.19 ORF108499 - 2.8e-44 151.5 0.0 4.3e-44 150.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF108499 - 8.4e-28 96.9 0.1 1.9e-27 95.8 0.1 1.6 1 0 0 1 1 1 1 DALR anticodon binding domain STT3 PF02516.14 ORF105218 - 0.014 14.3 0.0 0.017 14.1 0.0 1.1 1 0 0 1 1 1 0 Oligosaccharyl transferase STT3 subunit Peptidase_C1 PF00112.23 ORF103582 - 4.3e-63 213.3 9.4 5.1e-63 213.1 9.4 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF103582 - 0.001 18.9 0.0 0.0047 16.8 0.0 2.1 2 1 0 2 2 2 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF103582 - 0.019 13.8 3.5 1.9 7.2 0.1 2.9 2 1 1 3 3 3 0 Peptidase C1-like family Peptidase_C2 PF00648.21 ORF103582 - 0.029 13.4 0.1 0.038 13.0 0.1 1.2 1 0 0 1 1 1 0 Calpain family cysteine protease HRM PF02793.22 ORF103582 - 0.87 9.9 6.5 0.8 10.0 1.6 2.4 2 0 0 2 2 2 0 Hormone receptor domain CSD PF00313.22 ORF102703 - 2.7e-07 30.3 1.8 6.6e-07 29.1 1.8 1.7 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OTCace PF00185.24 ORF102703 - 0.013 15.5 1.4 0.17 12.0 0.7 2.3 2 0 0 2 2 2 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OB_RNB PF08206.11 ORF102703 - 0.088 12.5 3.5 0.17 11.6 3.5 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain DUF150_C PF17384.2 ORF102703 - 0.12 12.5 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 RimP C-terminal SH3 domain SCIMP PF15050.6 ORF102703 - 0.61 10.5 5.7 0.57 10.6 4.6 1.5 1 1 0 1 1 1 0 SCIMP protein CCDC84 PF14968.6 ORF102703 - 2.1 7.9 9.8 3.3 7.2 9.8 1.3 1 0 0 1 1 1 0 Coiled coil protein 84 Porin_3 PF01459.22 ORF101176 - 9.8e-13 48.2 0.0 1.1e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic porin PEP_mutase PF13714.6 ORF101162 - 1.7e-49 168.4 4.2 2.1e-49 168.1 4.2 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.21 ORF101162 - 2.3e-14 52.8 0.5 4e-14 52.0 0.5 1.3 1 0 0 1 1 1 1 Isocitrate lyase family WES_acyltransf PF03007.16 NODE_23332_length_883_cov_93.431604_g18103_i0reverse_frame_1 - 3e-08 33.8 0.0 4.6e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain zf-C2H2 PF00096.26 NODE_23270_length_884_cov_3801.557126_g16201_i5reverse_frame_1 - 5.9e-08 32.8 13.0 0.0013 19.1 0.9 4.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_23270_length_884_cov_3801.557126_g16201_i5reverse_frame_1 - 0.00036 21.1 10.7 0.0073 17.1 0.7 3.8 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_23270_length_884_cov_3801.557126_g16201_i5reverse_frame_1 - 0.05 14.1 0.1 0.05 14.1 0.1 3.7 3 0 0 3 3 3 0 Zinc-finger double domain FOXP-CC PF16159.5 NODE_23270_length_884_cov_3801.557126_g16201_i5reverse_frame_1 - 0.61 10.7 2.7 0.71 10.5 0.3 2.2 2 1 0 2 2 2 0 FOXP coiled-coil domain zf-C2H2_8 PF15909.5 NODE_23270_length_884_cov_3801.557126_g16201_i5reverse_frame_1 - 0.78 10.1 6.2 2.2 8.6 2.4 2.4 1 1 1 2 2 2 0 C2H2-type zinc ribbon Polo_box_3 PF18544.1 NODE_23258_length_885_cov_102.747059_g18043_i0forward_frame_1 - 0.016 15.9 1.4 0.054 14.1 0.2 2.3 2 0 0 2 2 2 0 Polo box domain DUF1968 PF09291.10 NODE_23235_length_886_cov_4.158637_g18026_i0forward_frame_2 - 0.091 12.8 1.4 0.27 11.3 1.4 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1968) Syndecan PF01034.20 NODE_23219_length_886_cov_480.601645_g17728_i2forward_frame_2 - 1 9.3 4.2 2.3 8.2 0.8 2.5 2 0 0 2 2 2 0 Syndecan domain Syndecan PF01034.20 NODE_23217_length_886_cov_573.963572_g17728_i1forward_frame_2 - 1 9.3 4.2 2.3 8.2 0.8 2.5 2 0 0 2 2 2 0 Syndecan domain DUF368 PF04018.13 NODE_23194_length_887_cov_226.721831_g17991_i0forward_frame_3 - 0.12 12.0 4.1 0.06 12.9 1.3 1.7 1 1 0 2 2 2 0 Domain of unknown function (DUF368) CLZ PF16526.5 ORF9957 - 0.041 14.3 14.9 0.37 11.2 0.4 4.1 3 1 1 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF2046 PF09755.9 ORF9957 - 0.055 12.7 19.1 0.74 9.0 8.9 2.6 1 1 1 2 2 2 0 Uncharacterized conserved protein H4 (DUF2046) AKNA PF12443.8 ORF9957 - 0.089 13.4 7.8 0.18 12.5 0.4 3.2 3 0 0 3 3 3 0 AT-hook-containing transcription factor TSC22 PF01166.18 ORF9957 - 0.11 12.8 5.2 2.8 8.3 0.0 3.8 3 1 0 3 3 3 0 TSC-22/dip/bun family TMF_TATA_bd PF12325.8 ORF9957 - 0.15 12.3 22.5 0.81 9.9 0.0 3.2 2 1 1 3 3 3 0 TATA element modulatory factor 1 TATA binding NPV_P10 PF05531.12 ORF9957 - 0.18 12.3 3.9 12 6.4 0.0 3.3 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF4200 PF13863.6 ORF9957 - 0.25 11.8 22.2 2.7 8.4 11.6 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) PspA_IM30 PF04012.12 ORF9957 - 0.57 9.7 28.3 0.19 11.3 24.5 2.1 1 1 1 2 2 2 0 PspA/IM30 family DUF1319 PF07028.11 ORF9957 - 0.72 10.1 5.3 4 7.7 1.5 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1319) ABC_tran_CTD PF16326.5 ORF9957 - 0.81 10.0 25.0 5.9 7.2 0.0 4.1 2 1 1 3 3 3 0 ABC transporter C-terminal domain Prefoldin_2 PF01920.20 ORF9957 - 1.5 8.8 20.3 23 5.0 0.2 4.2 2 1 1 3 3 3 0 Prefoldin subunit GAS PF13851.6 ORF9957 - 1.5 8.1 21.9 0.95 8.8 2.0 3.2 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding bZIP_2 PF07716.15 ORF9957 - 1.9 8.6 21.7 0.51 10.5 1.6 4.6 3 1 0 4 4 4 0 Basic region leucine zipper Swi5 PF07061.11 ORF9957 - 2.4 8.3 15.5 22 5.2 0.5 4.2 3 1 0 3 3 3 0 Swi5 DUF4795 PF16043.5 ORF9957 - 3 7.4 16.8 14 5.3 14.7 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4795) Fes1 PF08609.10 ORF9957 - 3.5 8.6 8.6 4 8.4 0.1 2.8 1 1 1 2 2 2 0 Nucleotide exchange factor Fes1 FlaC_arch PF05377.11 ORF9957 - 5 7.6 7.7 36 4.9 0.5 3.7 4 0 0 4 4 4 0 Flagella accessory protein C (FlaC) ERM PF00769.19 ORF9957 - 5.1 6.8 29.1 9.3 6.0 29.1 1.4 1 1 0 1 1 1 0 Ezrin/radixin/moesin family Pox_A_type_inc PF04508.12 ORF9957 - 7.5 6.6 10.6 13 5.8 0.4 3.9 5 0 0 5 5 4 0 Viral A-type inclusion protein repeat LPP PF04728.13 ORF9957 - 7.5 7.0 14.6 26 5.3 0.0 3.9 3 1 0 3 3 3 0 Lipoprotein leucine-zipper Paralemmin PF03285.15 ORF9957 - 8.5 5.9 19.2 0.24 10.9 9.0 2.4 2 1 1 3 3 3 0 Paralemmin DUF4472 PF14739.6 ORF9957 - 9.4 7.0 20.8 13 6.6 7.6 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4472) Ax_dynein_light PF10211.9 ORF9957 - 9.7 6.1 20.2 30 4.5 4.5 3.5 2 1 1 3 3 3 0 Axonemal dynein light chain Band_7 PF01145.25 ORF97498 - 1.5e-26 93.5 0.5 7.5e-26 91.2 0.4 2.0 2 0 0 2 2 2 1 SPFH domain / Band 7 family Med2 PF11214.8 ORF97498 - 0.076 13.2 2.4 0.15 12.2 2.4 1.5 1 0 0 1 1 1 0 Mediator complex subunit 2 DUF3334 PF11813.8 ORF97498 - 0.15 11.8 1.0 0.21 11.3 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3334) AAA_21 PF13304.6 ORF95445 - 2.6e-09 37.3 0.0 1.2e-08 35.2 0.0 1.9 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF95445 - 3.6e-07 30.8 0.0 9.1e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF95445 - 0.023 14.2 0.0 0.065 12.7 0.0 1.7 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain YflT PF11181.8 ORF95445 - 0.17 12.4 1.0 28 5.3 0.0 3.2 3 0 0 3 3 3 0 Heat induced stress protein YflT Transglut_core PF01841.19 ORF95138 - 2.1e-05 24.9 0.0 7.2e-05 23.2 0.0 1.8 1 1 0 1 1 1 1 Transglutaminase-like superfamily Pyrid_ox_like PF16242.5 ORF91462 - 0.003 17.2 0.0 0.0047 16.5 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Enkurin PF13864.6 ORF88131 - 7.4e-20 71.2 2.2 1.1e-19 70.6 2.2 1.3 1 0 0 1 1 1 1 Calmodulin-binding AAA_21 PF13304.6 ORF86376 - 2.8e-09 37.2 0.0 1.2e-08 35.2 0.0 1.9 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF86376 - 2.8e-07 31.1 0.0 9.1e-07 29.5 0.0 1.9 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF86376 - 0.02 14.4 0.0 0.059 12.8 0.0 1.8 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain RNA_pol_Rpb5_C PF01191.19 ORF86376 - 0.13 12.2 0.1 0.8 9.6 0.0 2.2 2 0 0 2 2 2 0 RNA polymerase Rpb5, C-terminal domain Aminotran_5 PF00266.19 ORF83882 - 3.2e-10 39.5 0.0 3.7e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 ORF83882 - 0.011 15.1 0.3 0.015 14.6 0.3 1.1 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 ORF83882 - 0.17 10.4 0.0 0.23 9.9 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks53.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks53.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks53.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks53.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NAM-associated PF14303.6 ORF81911 - 0.028 15.1 11.9 0.28 11.9 1.1 2.5 2 1 0 2 2 2 0 No apical meristem-associated C-terminal domain DUF4494 PF14902.6 ORF81911 - 0.054 13.3 0.6 0.16 11.8 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4494) Noelin-1 PF12308.8 ORF81911 - 0.19 11.7 4.4 0.39 10.7 0.0 3.2 3 1 0 3 3 3 0 Neurogenesis glycoprotein USP8_interact PF08941.10 ORF81911 - 0.31 10.8 7.4 1.1 9.0 0.1 3.3 3 0 0 3 3 3 0 USP8 interacting DUF4164 PF13747.6 ORF81911 - 0.44 10.9 0.1 0.44 10.9 0.1 4.0 4 1 0 4 4 4 0 Domain of unknown function (DUF4164) SlyX PF04102.12 ORF81911 - 1 10.0 19.2 0.74 10.5 0.5 4.9 4 2 1 5 5 5 0 SlyX DUF4407 PF14362.6 ORF81911 - 1.2 8.5 10.3 1.1e+02 2.0 10.3 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) CorA PF01544.18 ORF81911 - 1.3 8.2 6.8 1.5 8.1 0.2 2.3 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein BRE1 PF08647.11 ORF81911 - 2.5 8.2 29.1 0.071 13.2 4.6 4.9 5 0 0 5 5 5 0 BRE1 E3 ubiquitin ligase Phage_lysis PF03245.13 ORF81911 - 3.2 7.9 8.6 11 6.1 0.2 3.8 3 1 0 3 3 3 0 Bacteriophage Rz lysis protein DUF4140 PF13600.6 ORF81911 - 4.5 7.8 11.0 27 5.3 0.2 4.1 3 1 1 4 4 4 0 N-terminal domain of unknown function (DUF4140) CENP-F_leu_zip PF10473.9 ORF81911 - 4.6 7.3 30.5 0.38 10.8 4.6 3.7 3 1 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 XhlA PF10779.9 ORF81911 - 8.6 6.7 9.0 27 5.1 0.4 3.5 3 0 0 3 3 3 0 Haemolysin XhlA Tropomyosin_1 PF12718.7 ORF81911 - 9.6 6.3 25.1 2.4 8.3 1.5 3.6 3 1 0 3 3 3 0 Tropomyosin like EF-hand_1 PF00036.32 ORF81728 - 1.8e-17 61.5 0.8 2.3e-07 29.9 0.1 3.5 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF81728 - 1.1e-15 56.1 0.2 1.6e-05 24.5 0.0 3.6 3 0 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF81728 - 4.9e-13 49.3 1.3 2.2e-09 37.6 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF81728 - 3.9e-12 45.1 4.0 1.5e-05 24.2 0.1 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF81728 - 2.3e-07 30.6 1.0 0.0007 19.4 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF81728 - 0.0002 21.1 0.1 0.12 12.2 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF81728 - 0.00062 19.7 1.2 0.0027 17.6 0.3 2.3 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF81728 - 0.001 19.4 0.1 0.001 19.4 0.1 3.2 2 2 1 4 4 4 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF81728 - 0.0099 16.2 0.0 0.9 9.9 0.0 2.4 2 0 0 2 2 2 1 EF-hand domain DUF440 PF04269.12 ORF81728 - 0.014 15.7 2.5 1.2 9.4 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function, DUF440 Dockerin_1 PF00404.18 ORF81728 - 0.034 14.3 1.7 2.1 8.6 0.5 2.8 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_11 PF08976.11 ORF81728 - 0.041 14.8 0.0 0.1 13.5 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain Caleosin PF05042.13 ORF81728 - 0.066 13.1 0.1 5.3 6.9 0.0 2.7 2 1 0 2 2 2 0 Caleosin related protein LRRNT PF01462.18 ORF81728 - 0.12 12.1 0.2 0.26 11.0 0.2 1.4 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain LEA_3 PF03242.13 ORF79017 - 0.021 15.5 1.3 6.5 7.5 0.2 2.4 2 0 0 2 2 2 0 Late embryogenesis abundant protein Ni_hydr_CYTB PF01292.20 ORF79017 - 0.22 11.1 0.0 0.31 10.6 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 U1snRNP70_N PF12220.8 ORF79017 - 0.32 11.7 6.0 0.19 12.4 1.6 2.3 2 0 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal SPT6_acidic PF14632.6 ORF79017 - 2.4 8.8 15.2 0.94 10.1 4.6 2.4 2 0 0 2 2 2 0 Acidic N-terminal SPT6 Rrp15p PF07890.12 ORF79017 - 2.7 8.3 13.5 1.4 9.3 1.6 2.3 2 0 0 2 2 2 0 Rrp15p DUF1682 PF07946.14 ORF79017 - 5.9 6.0 10.4 0.86 8.8 1.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1682) Peptidase_C50 PF03568.17 ORF75553 - 1.4e-06 27.7 0.0 2.1e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Peptidase family C50 U-box PF04564.15 ORF74831 - 6.5e-06 26.2 0.3 2.1e-05 24.6 0.0 1.9 2 0 0 2 2 2 1 U-box domain zf-CCCH PF00642.24 ORF74831 - 3.7e-05 23.5 0.9 3.7e-05 23.5 0.9 2.1 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) FapA PF03961.13 ORF74831 - 7.7e-05 21.5 6.1 0.00011 21.0 6.1 1.3 1 0 0 1 1 1 1 Flagellar Assembly Protein A zf_CCCH_4 PF18345.1 ORF74831 - 0.00022 21.2 0.4 0.00048 20.1 0.4 1.6 1 0 0 1 1 1 1 Zinc finger domain Cast PF10174.9 ORF74831 - 0.0039 15.5 11.4 0.0057 15.0 11.4 1.2 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone DUF3490 PF11995.8 ORF74831 - 0.0078 16.0 4.9 0.018 14.9 4.9 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF3490) zf-CCCH_4 PF18044.1 ORF74831 - 0.012 15.4 1.4 0.032 14.0 1.4 1.8 1 0 0 1 1 1 0 CCCH-type zinc finger OmpH PF03938.14 ORF74831 - 0.013 15.8 3.9 0.022 15.1 3.9 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Leu_zip PF15294.6 ORF74831 - 0.018 14.6 11.4 0.031 13.8 11.4 1.3 1 0 0 1 1 1 0 Leucine zipper tRNA_anti-codon PF01336.25 ORF74831 - 0.11 12.4 0.2 0.41 10.7 0.0 1.9 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain bZIP_1 PF00170.21 ORF74831 - 0.13 12.3 16.2 1.1 9.4 8.2 2.6 2 0 0 2 2 2 0 bZIP transcription factor DASH_Dam1 PF08653.10 ORF74831 - 0.15 11.9 1.1 0.5 10.2 0.1 2.3 2 1 0 2 2 2 0 DASH complex subunit Dam1 CENP-Q PF13094.6 ORF74831 - 0.16 12.2 8.0 0.26 11.5 8.0 1.3 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit IFP_35_N PF07334.13 ORF74831 - 0.17 12.0 6.3 0.38 10.9 1.7 2.5 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF1664 PF07889.12 ORF74831 - 0.22 11.6 7.2 9.6 6.3 7.2 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) ACR_tran PF00873.19 ORF74831 - 0.42 8.2 0.8 0.53 7.9 0.8 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family FlaC_arch PF05377.11 ORF74831 - 0.5 10.8 12.4 6.4 7.3 0.3 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) GTP-bdg_M PF16360.5 ORF74831 - 0.53 10.9 3.3 4.6 7.9 2.7 2.4 1 1 0 1 1 1 0 GTP-binding GTPase Middle Region HMMR_C PF15908.5 ORF74831 - 0.6 10.4 11.8 0.45 10.8 6.2 2.3 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal PRKG1_interact PF15898.5 ORF74831 - 0.61 11.0 13.9 0.29 12.0 9.9 2.5 1 1 2 3 3 3 0 cGMP-dependent protein kinase interacting domain Syntaxin_2 PF14523.6 ORF74831 - 1.3 9.5 13.0 2.7 8.4 13.0 1.5 1 0 0 1 1 1 0 Syntaxin-like protein LMBR1 PF04791.16 ORF74831 - 1.4 7.8 4.0 1.7 7.5 4.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Cnn_1N PF07989.11 ORF74831 - 1.4 9.1 12.1 2 8.6 5.3 2.5 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF641 PF04859.12 ORF74831 - 1.7 9.0 10.2 1.5 9.2 8.5 1.8 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF1640 PF07798.11 ORF74831 - 4 7.5 12.1 8.5 6.4 12.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) DivIC PF04977.15 ORF74831 - 4.1 7.2 7.9 4.9 7.0 4.1 2.4 1 1 0 2 2 2 0 Septum formation initiator LPP PF04728.13 ORF74831 - 4.6 7.7 8.2 16 6.0 0.1 3.0 1 1 1 2 2 2 0 Lipoprotein leucine-zipper AKNA PF12443.8 ORF74831 - 6.1 7.6 10.2 14 6.4 6.5 2.5 1 1 1 2 2 2 0 AT-hook-containing transcription factor YabA PF06156.13 ORF74831 - 6.7 7.4 9.8 39 4.9 5.1 2.9 2 1 1 3 3 3 0 Initiation control protein YabA TMPIT PF07851.13 ORF74831 - 7.5 5.7 10.0 11 5.2 10.0 1.2 1 0 0 1 1 1 0 TMPIT-like protein Fzo_mitofusin PF04799.13 ORF74831 - 8.1 6.0 9.1 33 4.0 8.8 1.9 1 1 1 2 2 2 0 fzo-like conserved region BPD_transp_1 PF00528.22 ORF7441 - 8.7e-17 61.4 31.6 4.1e-16 59.3 31.6 2.1 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Ion_trans_2 PF07885.16 ORF71708 - 2.6e-09 36.9 1.8 4e-09 36.3 0.3 2.1 2 0 0 2 2 2 1 Ion channel Ion_trans PF00520.31 ORF71708 - 0.00027 20.2 12.9 0.00055 19.2 12.9 1.6 1 1 0 1 1 1 1 Ion transport protein PI3_PI4_kinase PF00454.27 ORF63950 - 1e-34 120.5 0.6 2.6e-25 89.7 0.5 2.2 1 1 1 2 2 2 2 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 ORF63950 - 0.01 15.2 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) Exo_endo_phos PF03372.23 ORF5884 - 4e-19 69.1 0.0 6e-19 68.5 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF5884 - 0.0098 15.7 1.2 0.015 15.2 0.1 1.9 2 0 0 2 2 2 1 Endonuclease-reverse transcriptase TMEM144 PF07857.12 ORF58506 - 9.7e-50 169.4 0.4 1.5e-49 168.8 0.4 1.3 1 1 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Sugar_transport PF06800.12 ORF58506 - 0.00014 21.3 4.0 0.00014 21.3 4.0 1.6 2 0 0 2 2 2 1 Sugar transport protein EVI2A PF05399.11 ORF58506 - 0.039 13.5 0.2 0.059 13.0 0.2 1.2 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) DUF4149 PF13664.6 ORF58506 - 0.1 12.9 3.0 0.21 12.0 0.3 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4149) Abhydrolase_6 PF12697.7 ORF58143 - 0.0014 19.2 4.7 0.0018 18.9 4.6 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Chlorophyllase2 PF12740.7 ORF58143 - 0.044 12.7 0.0 0.065 12.1 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme PAF-AH_p_II PF03403.13 ORF58143 - 0.097 11.2 0.0 0.13 10.7 0.0 1.1 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II AAA_9 PF12781.7 ORF56368 - 0.0015 17.7 0.0 0.0026 16.9 0.0 1.4 1 0 0 1 1 1 1 ATP-binding dynein motor region FAD_binding_4 PF01565.23 ORF56304 - 2.2e-25 89.0 0.0 3.5e-25 88.4 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain FAD-oxidase_C PF02913.19 ORF56304 - 9.3e-16 58.2 0.0 1.3e-15 57.8 0.0 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain PepSY_like PF11396.8 ORF56304 - 0.096 13.2 0.0 0.23 12.0 0.0 1.6 1 0 0 1 1 1 0 Putative beta-lactamase-inhibitor-like, PepSY-like Nepo_coat_N PF03689.15 ORF54624 - 0.52 10.3 2.3 4.6 7.3 0.2 2.7 2 1 1 3 3 3 0 Nepovirus coat protein, N-terminal domain LCAT PF02450.15 ORF51303 - 9.1e-18 64.6 0.0 6.1e-16 58.6 0.0 2.1 1 1 0 2 2 2 1 Lecithin:cholesterol acyltransferase Abhydrolase_6 PF12697.7 ORF51303 - 0.00011 22.8 0.0 0.00031 21.4 0.0 1.7 1 1 1 2 2 2 1 Alpha/beta hydrolase family Ser_hydrolase PF06821.13 ORF51303 - 0.0033 17.3 0.0 0.0057 16.5 0.0 1.4 1 0 0 1 1 1 1 Serine hydrolase DUF900 PF05990.12 ORF51303 - 0.0085 15.6 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) DUF726 PF05277.12 ORF51303 - 0.011 14.6 0.0 0.016 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF726) LIDHydrolase PF10230.9 ORF51303 - 0.036 13.6 0.0 0.053 13.1 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase UPF0565 PF10561.9 ORF51303 - 0.043 13.0 0.0 0.075 12.2 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Esterase PF00756.20 ORF51303 - 0.12 12.0 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Putative esterase Abhydrolase_1 PF00561.20 ORF51303 - 0.12 11.9 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF51303 - 0.18 11.1 0.0 0.32 10.2 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 AAA_21 PF13304.6 ORF46930 - 1.5e-09 38.1 0.0 1.2e-08 35.2 0.0 2.2 2 1 1 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF46930 - 3.7e-07 30.7 0.0 9.1e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF46930 - 0.026 14.0 0.0 0.065 12.7 0.0 1.6 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain CBM_20 PF00686.19 ORF44422 - 4.1e-19 68.3 0.0 8.3e-19 67.3 0.0 1.5 1 0 0 1 1 1 1 Starch binding domain TPR_2 PF07719.17 ORF44236 - 3.6e-07 29.8 6.4 0.00057 19.8 0.0 3.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF44236 - 5.5e-07 29.1 5.1 0.00066 19.4 0.0 3.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF44236 - 0.0011 18.6 0.1 0.72 9.6 0.0 2.7 3 0 0 3 3 3 2 TPR repeat TPR_12 PF13424.6 ORF44236 - 0.01 16.1 10.4 0.018 15.3 0.0 3.3 2 1 0 3 3 3 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF44236 - 0.015 15.5 1.9 0.015 15.5 1.9 3.6 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF44236 - 0.093 13.6 0.0 0.093 13.6 0.0 4.9 4 1 0 5 5 5 0 Tetratricopeptide repeat CPSase_L_D3 PF02787.19 ORF44236 - 0.2 12.0 0.0 0.3 11.5 0.0 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Microvir_J PF04726.13 ORF38820 - 1.5 8.9 4.2 0.64 10.0 0.8 2.0 2 0 0 2 2 2 0 Microvirus J protein CTP_transf_like PF01467.26 ORF3754 - 2.3e-07 31.1 0.0 5.1e-07 30.0 0.0 1.6 1 1 0 1 1 1 1 Cytidylyltransferase-like Aminotran_4 PF01063.19 ORF35590 - 1.1e-50 172.6 0.0 1.3e-50 172.4 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV G-gamma PF00631.22 ORF35590 - 0.18 11.8 0.0 0.37 10.8 0.0 1.4 1 0 0 1 1 1 0 GGL domain EamA PF00892.20 ORF35160 - 1.4e-21 77.1 36.4 6.6e-18 65.2 14.3 2.2 2 0 0 2 2 2 2 EamA-like transporter family ACOX PF01756.19 ORF35155 - 4.9e-18 65.3 0.0 7.8e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_dh_1 PF00441.24 ORF35155 - 0.046 13.9 0.0 0.068 13.4 0.0 1.2 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain Ion_trans_2 PF07885.16 ORF34972 - 2.6e-09 36.9 1.8 4e-09 36.3 0.3 2.1 2 0 0 2 2 2 1 Ion channel Ion_trans PF00520.31 ORF34972 - 0.00027 20.2 12.9 0.00055 19.2 12.9 1.6 1 1 0 1 1 1 1 Ion transport protein Thiolase_N PF00108.23 ORF34895 - 1.5e-40 139.2 0.0 2.2e-40 138.7 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF34895 - 8.3e-36 122.3 1.0 1.3e-35 121.7 1.0 1.3 1 0 0 1 1 1 1 Thiolase, C-terminal domain Hint_2 PF13403.6 ORF34895 - 0.044 14.1 0.2 0.74 10.1 0.0 2.1 1 1 1 2 2 2 0 Hint domain EF-hand_1 PF00036.32 ORF34334 - 1.8e-17 61.5 0.8 2.3e-07 29.9 0.1 3.5 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF34334 - 1.1e-15 56.1 0.2 1.6e-05 24.5 0.0 3.6 3 0 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF34334 - 4.9e-13 49.3 1.3 2.2e-09 37.6 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF34334 - 3.9e-12 45.1 4.0 1.5e-05 24.2 0.1 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF34334 - 2.3e-07 30.6 1.0 0.0007 19.4 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF34334 - 0.0002 21.1 0.1 0.12 12.2 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF34334 - 0.00062 19.7 1.2 0.0027 17.6 0.3 2.3 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF34334 - 0.001 19.4 0.1 0.001 19.4 0.1 3.2 2 2 1 4 4 4 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF34334 - 0.0099 16.2 0.0 0.9 9.9 0.0 2.4 2 0 0 2 2 2 1 EF-hand domain DUF440 PF04269.12 ORF34334 - 0.014 15.7 2.5 1.2 9.4 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function, DUF440 Dockerin_1 PF00404.18 ORF34334 - 0.034 14.3 1.7 2.1 8.6 0.5 2.8 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_11 PF08976.11 ORF34334 - 0.041 14.8 0.0 0.1 13.5 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain Caleosin PF05042.13 ORF34334 - 0.066 13.1 0.1 5.3 6.9 0.0 2.7 2 1 0 2 2 2 0 Caleosin related protein LRRNT PF01462.18 ORF34334 - 0.12 12.1 0.2 0.26 11.0 0.2 1.4 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain Exo_endo_phos PF03372.23 ORF31612 - 4.1e-19 69.0 0.0 6e-19 68.5 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF31612 - 0.007 16.2 0.1 0.015 15.2 0.1 1.6 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase DUF313 PF03754.13 ORF28576 - 0.00067 19.9 4.6 0.0049 17.1 0.2 2.5 1 1 0 2 2 2 2 Domain of unknown function (DUF313) CHASE PF03924.13 ORF28576 - 0.051 13.5 0.2 0.079 12.9 0.2 1.3 1 0 0 1 1 1 0 CHASE domain CTP_transf_like PF01467.26 ORF25287 - 2.3e-07 31.1 0.0 5.1e-07 30.0 0.0 1.6 1 1 0 1 1 1 1 Cytidylyltransferase-like Phasin PF05597.11 ORF2350 - 0.12 12.4 1.9 0.2 11.7 1.9 1.3 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) ATP-synt_B PF00430.18 ORF2350 - 2.1 8.5 8.8 0.76 9.9 6.2 1.6 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) Neur_chan_memb PF02932.16 ORF22487 - 0.025 14.7 3.8 0.034 14.2 3.8 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Neur_chan_LBD PF02931.23 ORF22487 - 0.11 11.9 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel ligand binding domain Ion_trans_2 PF07885.16 ORF22223 - 2.6e-09 36.9 1.8 4e-09 36.3 0.3 2.1 2 0 0 2 2 2 1 Ion channel Ion_trans PF00520.31 ORF22223 - 0.00027 20.2 12.9 0.00055 19.2 12.9 1.6 1 1 0 1 1 1 1 Ion transport protein R2K_3 PF14243.6 ORF18342 - 0.07 13.1 0.4 9.8 6.1 0.1 2.2 2 0 0 2 2 2 0 ATP-grasp domain, R2K clade family 3 Spc7 PF08317.11 ORF18342 - 0.076 11.9 29.6 0.035 13.0 11.3 3.0 1 1 2 3 3 3 0 Spc7 kinetochore protein Nif11 PF07862.11 ORF18342 - 0.46 10.8 0.2 0.46 10.8 0.2 3.2 3 0 0 3 3 3 0 Nif11 domain NPV_P10 PF05531.12 ORF18342 - 2 8.9 5.2 26 5.4 0.3 3.5 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein Fez1 PF06818.15 ORF18342 - 2.8 8.3 28.1 1 9.8 12.3 2.8 1 1 2 3 3 3 0 Fez1 CENP-F_leu_zip PF10473.9 ORF18342 - 9.5 6.2 34.1 3.1 7.8 8.4 3.7 2 2 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HEAT_2 PF13646.6 ORF12483 - 3.7e-11 43.3 8.1 0.00048 20.5 2.9 3.9 1 1 3 4 4 4 3 HEAT repeats HEAT PF02985.22 ORF12483 - 8.6e-09 34.9 10.3 0.0024 18.0 0.0 6.4 7 0 0 7 7 7 3 HEAT repeat Arm PF00514.23 ORF12483 - 4.3e-05 23.4 2.6 0.037 14.1 0.0 3.3 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 ORF12483 - 4.4e-05 23.6 0.0 2.5 8.1 0.1 3.1 2 1 1 3 3 3 3 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 ORF12483 - 0.007 15.0 0.4 1.5 7.3 0.1 1.9 1 1 1 2 2 2 2 Adaptin N terminal region HEAT_EZ PF13513.6 ORF12483 - 0.015 15.8 12.7 0.1 13.1 0.1 5.2 4 2 2 6 6 6 0 HEAT-like repeat CLASP_N PF12348.8 ORF12483 - 0.022 14.3 0.0 0.24 10.9 0.0 2.2 2 1 0 2 2 2 0 CLASP N terminal RTP1_C1 PF10363.9 ORF12483 - 0.043 14.0 0.0 0.42 10.8 0.0 2.5 1 1 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF4042 PF13251.6 ORF12483 - 0.092 12.4 0.1 8 6.1 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4042) DUF2019 PF09450.10 ORF12483 - 0.11 12.5 0.1 0.64 10.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF2019) HEAT_PBS PF03130.16 ORF12483 - 0.68 10.8 9.1 2 9.3 0.7 4.7 6 1 0 6 6 5 0 PBS lyase HEAT-like repeat p450 PF00067.22 ORF11494 - 2.5e-47 161.7 0.0 3.1e-47 161.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 AAA_21 PF13304.6 ORF108965 - 2.6e-09 37.3 0.0 1.2e-08 35.2 0.0 1.9 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF108965 - 3.6e-07 30.8 0.0 9.1e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF108965 - 0.023 14.2 0.0 0.065 12.7 0.0 1.7 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain YflT PF11181.8 ORF108965 - 0.17 12.4 1.0 28 5.3 0.0 3.2 3 0 0 3 3 3 0 Heat induced stress protein YflT DUF1415 PF07209.12 ORF103192 - 2.3e-23 82.8 0.0 3.1e-15 56.3 0.0 2.4 3 0 0 3 3 3 2 Protein of unknown function (DUF1415) Bystin PF05291.11 ORF10262 - 8.6e-50 169.7 1.1 8.6e-50 169.7 1.1 2.2 2 0 0 2 2 2 1 Bystin Acyltransferase PF01553.21 ORF100941 - 7.2e-15 54.8 0.1 1.4e-14 53.8 0.0 1.5 2 0 0 2 2 2 1 Acyltransferase BID PF06393.11 ORF100941 - 0.18 11.3 0.3 0.33 10.5 0.1 1.5 2 0 0 2 2 2 0 BH3 interacting domain (BID) EutC PF05985.11 ORF100648 - 7.6e-79 264.3 0.1 9.3e-79 264.0 0.1 1.1 1 0 0 1 1 1 1 Ethanolamine ammonia-lyase light chain (EutC) TANGO2 PF05742.12 ORF100648 - 0.045 13.8 0.0 0.059 13.4 0.0 1.2 1 0 0 1 1 1 0 Transport and Golgi organisation 2 IF3_C PF00707.22 NODE_23379_length_882_cov_3.282172_g18143_i0reverse_frame_1 - 0.076 13.0 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain RTTN_N PF14726.6 NODE_23373_length_882_cov_73.750885_g18138_i0reverse_frame_1 - 0.48 11.3 8.5 0.12 13.2 4.8 2.0 2 2 0 2 2 2 0 Rotatin, an armadillo repeat protein, centriole functioning PPR_3 PF13812.6 NODE_23370_length_882_cov_109.465171_g18135_i0forward_frame_1 - 0.00016 21.7 0.0 0.00051 20.1 0.0 1.9 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_23370_length_882_cov_109.465171_g18135_i0forward_frame_1 - 0.0062 16.7 0.0 0.32 11.2 0.0 3.2 2 1 1 3 3 3 1 PPR repeat family PPR PF01535.20 NODE_23370_length_882_cov_109.465171_g18135_i0forward_frame_1 - 0.021 15.0 0.0 0.72 10.2 0.0 3.0 3 0 0 3 3 3 0 PPR repeat PPR_1 PF12854.7 NODE_23370_length_882_cov_109.465171_g18135_i0forward_frame_1 - 0.25 11.1 0.4 22 4.8 0.1 2.6 2 0 0 2 2 2 0 PPR repeat DHFR_2 PF06442.11 NODE_23326_length_883_cov_138.904481_g18097_i0reverse_frame_3 - 0.12 12.2 0.0 0.42 10.5 0.0 1.9 2 0 0 2 2 2 0 R67 dihydrofolate reductase Ribosomal_L34e PF01199.18 NODE_23326_length_883_cov_138.904481_g18097_i0reverse_frame_3 - 4.6 7.6 8.7 0.35 11.2 2.6 2.3 2 0 0 2 2 2 0 Ribosomal protein L34e GTP_EFTU PF00009.27 NODE_23304_length_884_cov_3.679623_g18080_i0forward_frame_3 - 5.6e-31 107.6 0.0 5.6e-31 107.6 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 NODE_23304_length_884_cov_3.679623_g18080_i0forward_frame_3 - 0.00023 21.5 0.1 0.00047 20.5 0.1 1.5 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 NODE_23304_length_884_cov_3.679623_g18080_i0forward_frame_3 - 0.0004 20.5 0.0 0.00077 19.5 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase NEMP PF10225.9 ORF99255 - 8.8e-05 22.3 0.1 8.8e-05 22.3 0.1 2.0 2 1 0 2 2 2 1 NEMP family S1 PF00575.23 ORF95990 - 0.0002 21.7 1.4 0.16 12.3 0.1 3.1 3 1 0 3 3 3 2 S1 RNA binding domain DUF952 PF06108.12 ORF95990 - 0.12 12.4 0.0 16 5.6 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF952) Pkinase PF00069.25 ORF95972 - 2.3e-06 27.2 0.0 4.3e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain HUN PF08729.10 ORF95775 - 1.6 8.8 11.7 0.22 11.5 5.7 2.5 2 0 0 2 2 2 0 HPC2 and ubinuclein domain Homeodomain PF00046.29 ORF9057 - 1.2e-07 31.5 4.8 2.9e-07 30.2 4.8 1.6 1 0 0 1 1 1 1 Homeodomain Rad50_zn_hook PF04423.14 ORF9057 - 0.089 12.6 0.3 0.089 12.6 0.3 2.4 2 0 0 2 2 2 0 Rad50 zinc hook motif Pex14_N PF04695.13 ORF86967 - 0.015 16.0 1.2 0.77 10.4 1.7 2.2 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Pex2_Pex12 PF04757.14 ORF86967 - 0.072 12.7 0.8 0.35 10.4 0.0 2.0 2 0 0 2 2 2 0 Pex2 / Pex12 amino terminal region MutS_II PF05188.17 ORF86967 - 0.15 12.3 0.2 0.27 11.5 0.2 1.4 1 0 0 1 1 1 0 MutS domain II CCDC53 PF10152.9 ORF86967 - 1.8 9.0 7.5 8.6 6.8 0.2 2.2 2 0 0 2 2 2 0 Subunit CCDC53 of WASH complex DUF3138 PF11336.8 ORF86967 - 4 5.9 8.3 3.5 6.1 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3138) DUF3729 PF12526.8 ORF86967 - 5.5 8.6 12.1 5.5 8.6 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3729) Nudix_hydro PF18290.1 ORF8533 - 3.5e-25 87.8 0.0 6.9e-25 86.9 0.0 1.5 1 0 0 1 1 1 1 Nudix hydrolase domain NUDIX PF00293.28 ORF8533 - 6e-23 81.3 0.0 9.9e-23 80.6 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain adh_short_C2 PF13561.6 ORF84013 - 6.6e-58 196.0 0.0 7.9e-58 195.8 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF84013 - 3.2e-44 150.8 0.0 3.8e-44 150.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF84013 - 2.1e-07 31.1 0.0 2.8e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 KR domain RecX PF02631.16 ORF84013 - 0.067 13.7 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 RecX family PARP PF00644.20 ORF8309 - 8.5e-07 28.8 0.0 1.6e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain PTS_2-RNA PF01885.16 ORF8309 - 0.12 12.4 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Actin PF00022.19 ORF8266 - 3.8e-116 388.0 0.0 1.4e-115 386.1 0.0 1.7 1 1 0 1 1 1 1 Actin S1-P1_nuclease PF02265.16 ORF81407 - 3.1e-22 79.6 0.0 3.6e-22 79.4 0.0 1.1 1 0 0 1 1 1 1 S1/P1 Nuclease ACOX PF01756.19 ORF80774 - 0.069 12.7 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Acyl-CoA oxidase Asp PF00026.23 ORF78423 - 5.4e-22 78.6 1.5 6.6e-22 78.3 1.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Pkinase PF00069.25 ORF76850 - 2.3e-06 27.2 0.0 4.3e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Cpn60_TCP1 PF00118.24 ORF75898 - 1.1e-75 255.1 7.0 1.3e-75 254.9 7.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF3226 PF11536.8 ORF75898 - 0.013 15.1 3.1 0.022 14.5 2.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3226) DUF1894 PF08979.11 ORF75898 - 0.034 14.5 3.2 0.11 12.9 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1894) Thioredoxin_3 PF13192.6 ORF75898 - 0.28 11.3 4.4 8 6.6 0.1 3.0 3 0 0 3 3 3 0 Thioredoxin domain DUF1176 PF06674.11 ORF73726 - 5.7e-89 298.8 0.0 6.4e-89 298.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1176) DUF443 PF04276.12 ORF73194 - 0.022 14.5 0.1 0.049 13.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF443) Peptidase_M48 PF01435.18 ORF71463 - 4.1e-26 92.0 0.3 6.1e-26 91.4 0.3 1.2 1 0 0 1 1 1 1 Peptidase family M48 Snapin_Pallidin PF14712.6 ORF71463 - 0.11 13.0 0.0 4.2 7.8 0.0 2.4 2 0 0 2 2 2 0 Snapin/Pallidin 7tm_7 PF08395.12 ORF70981 - 0.0002 20.7 1.0 0.00027 20.2 1.0 1.1 1 0 0 1 1 1 1 7tm Chemosensory receptor DUF3671 PF12420.8 ORF70981 - 0.019 15.0 3.7 0.041 14.0 3.7 1.6 1 0 0 1 1 1 0 Protein of unknown function VKOR PF07884.14 ORF70981 - 0.048 13.8 0.2 0.072 13.3 0.2 1.2 1 0 0 1 1 1 0 Vitamin K epoxide reductase family NS3_envE PF02723.14 ORF70981 - 0.077 13.1 0.7 0.077 13.1 0.7 1.7 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E RXT2_N PF08595.11 ORF70981 - 0.078 13.0 10.8 0.035 14.1 8.5 1.5 1 1 0 1 1 1 0 RXT2-like, N-terminal PIG-Y PF15159.6 ORF70981 - 0.44 11.5 4.2 0.96 10.4 4.2 1.5 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF2207 PF09972.9 ORF70981 - 4.9 5.8 10.2 0.11 11.3 1.9 1.9 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) Peptidase_C26 PF07722.13 ORF70690 - 5.3e-16 59.0 0.2 3e-15 56.5 0.2 2.1 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF70690 - 1.1e-06 28.6 0.0 2.7e-06 27.3 0.0 1.7 1 1 0 1 1 1 1 Glutamine amidotransferase class-I VCH_CASS14 PF18315.1 ORF68226 - 0.018 15.1 0.0 0.032 14.3 0.0 1.3 1 0 0 1 1 1 0 Integron cassette protein VCH_CASS1 chain N6_N4_Mtase PF01555.18 ORF68213 - 6.8e-54 183.0 0.0 8.5e-54 182.7 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Cons_hypoth95 PF03602.15 ORF68213 - 3.2e-06 26.9 0.0 0.002 17.8 0.0 2.5 2 1 0 2 2 2 2 Conserved hypothetical protein 95 UPF0020 PF01170.18 ORF68213 - 0.0078 15.9 0.0 1.4 8.6 0.0 2.6 2 1 0 2 2 2 2 Putative RNA methylase family UPF0020 MethyltransfD12 PF02086.15 ORF68213 - 0.019 14.6 0.0 0.27 10.9 0.0 2.3 3 0 0 3 3 3 0 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_11 PF08241.12 ORF68213 - 0.034 14.8 0.1 0.8 10.4 0.0 2.8 2 2 0 2 2 2 0 Methyltransferase domain Methyltransf_15 PF09445.10 ORF68213 - 0.085 12.4 0.0 10 5.6 0.0 2.2 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase PHO4 PF01384.20 ORF66240 - 0.0084 15.2 0.2 0.012 14.7 0.2 1.3 1 0 0 1 1 1 1 Phosphate transporter family MaAIMP_sms PF16951.5 ORF66240 - 0.15 11.8 2.2 0.17 11.6 0.1 2.2 2 0 0 2 2 2 0 Putative methionine and alanine importer, small subunit HSP33 PF01430.19 ORF64235 - 7.9e-86 287.8 0.0 9e-86 287.6 0.0 1.0 1 0 0 1 1 1 1 Hsp33 protein Homeodomain PF00046.29 ORF62958 - 1.2e-07 31.5 4.8 2.9e-07 30.2 4.8 1.6 1 0 0 1 1 1 1 Homeodomain Rad50_zn_hook PF04423.14 ORF62958 - 0.089 12.6 0.3 0.089 12.6 0.3 2.4 2 0 0 2 2 2 0 Rad50 zinc hook motif CBS PF00571.28 ORF59654 - 5e-09 36.5 1.3 0.0014 19.0 0.1 2.7 2 0 0 2 2 2 2 CBS domain XhlA PF10779.9 ORF5683 - 0.31 11.3 1.7 2.6 8.3 1.3 2.5 2 0 0 2 2 2 0 Haemolysin XhlA DUF2576 PF10845.8 ORF5683 - 0.34 10.5 4.3 0.18 11.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) ZapB PF06005.12 ORF5683 - 0.63 10.5 7.2 0.83 10.1 1.8 2.9 4 0 0 4 4 4 0 Cell division protein ZapB Fzo_mitofusin PF04799.13 ORF5683 - 1.2 8.7 6.0 1.3 8.6 4.1 1.9 2 0 0 2 2 2 0 fzo-like conserved region DUF4686 PF15742.5 ORF54197 - 0.012 14.7 18.8 0.017 14.3 18.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4686) GIT_CC PF16559.5 ORF54197 - 0.74 9.7 8.2 0.5 10.3 1.2 2.6 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Phage_Gp23 PF10669.9 ORF54197 - 3.3 8.0 10.1 6.8 7.0 10.1 1.5 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) AP-5_subunit_s1 PF15001.6 ORF54197 - 6.2 6.8 9.1 4 7.4 5.8 2.2 2 0 0 2 2 2 0 AP-5 complex subunit sigma-1 EssA PF10661.9 ORF54197 - 8.8 6.2 10.4 41 4.0 6.1 2.5 1 1 1 2 2 2 0 WXG100 protein secretion system (Wss), protein EssA Pkinase PF00069.25 ORF53884 - 6.2e-05 22.5 0.0 0.0012 18.2 0.0 2.0 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF53884 - 0.046 13.6 0.1 0.11 12.4 0.1 1.6 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 ORF53884 - 0.082 12.2 0.1 0.34 10.1 0.0 1.8 2 0 0 2 2 2 0 Protein tyrosine kinase WaaY PF06176.11 ORF53884 - 0.17 11.5 0.0 0.27 10.8 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide core biosynthesis protein (WaaY) Asparaginase_C PF17763.1 ORF53884 - 0.19 12.0 0.0 0.4 10.9 0.1 1.4 1 1 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain RRM_2 PF04059.12 ORF50602 - 3.3e-21 75.3 0.0 6.3e-21 74.4 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF50602 - 0.052 13.4 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) XhlA PF10779.9 ORF50374 - 0.31 11.3 1.7 2.6 8.3 1.3 2.5 2 0 0 2 2 2 0 Haemolysin XhlA DUF2576 PF10845.8 ORF50374 - 0.34 10.5 4.3 0.18 11.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) ZapB PF06005.12 ORF50374 - 0.63 10.5 7.2 0.83 10.1 1.8 2.9 4 0 0 4 4 4 0 Cell division protein ZapB Fzo_mitofusin PF04799.13 ORF50374 - 1.2 8.7 6.0 1.3 8.6 4.1 1.9 2 0 0 2 2 2 0 fzo-like conserved region U62_UL91 PF17442.2 ORF50341 - 0.12 12.4 1.3 0.31 11.1 0.2 2.4 2 0 0 2 2 2 0 Functional domain of U62 and UL91 proteins VDE PF07137.11 ORF49893 - 1e-20 74.3 0.0 1.8e-20 73.5 0.0 1.4 1 1 0 1 1 1 1 VDE lipocalin domain adh_short_C2 PF13561.6 ORF49183 - 6.6e-58 196.0 0.0 7.9e-58 195.8 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF49183 - 3.2e-44 150.8 0.0 3.8e-44 150.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF49183 - 2.1e-07 31.1 0.0 2.8e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 KR domain RecX PF02631.16 ORF49183 - 0.067 13.7 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 RecX family Channel_Tsx PF03502.13 ORF4897 - 1.7e-82 276.9 20.8 1.9e-82 276.7 20.8 1.0 1 0 0 1 1 1 1 Nucleoside-specific channel-forming protein, Tsx LPAM_1 PF08139.12 ORF4897 - 0.0021 18.5 2.1 0.0033 17.8 2.1 1.3 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site Hpt PF01627.23 ORF4768 - 0.013 15.7 1.3 8.1 6.8 0.0 3.1 3 0 0 3 3 3 0 Hpt domain Hemerythrin PF01814.23 ORF4768 - 0.39 11.3 3.3 4.6 7.9 0.4 2.9 1 1 0 2 2 2 0 Hemerythrin HHE cation binding domain Channel_Tsx PF03502.13 ORF45387 - 1.7e-82 276.9 20.8 1.9e-82 276.7 20.8 1.0 1 0 0 1 1 1 1 Nucleoside-specific channel-forming protein, Tsx LPAM_1 PF08139.12 ORF45387 - 0.0021 18.5 2.1 0.0033 17.8 2.1 1.3 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site Pkinase PF00069.25 ORF42403 - 2.3e-06 27.2 0.0 4.3e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Peptidase_U32 PF01136.19 ORF42258 - 7.7e-13 48.1 0.0 1.1e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family U32 HCO3_cotransp PF00955.21 ORF41765 - 4.5e-64 217.1 0.1 5.3e-64 216.9 0.1 1.1 1 0 0 1 1 1 1 HCO3- transporter family XhlA PF10779.9 ORF40980 - 0.31 11.3 1.7 2.6 8.3 1.3 2.5 2 0 0 2 2 2 0 Haemolysin XhlA DUF2576 PF10845.8 ORF40980 - 0.34 10.5 4.3 0.18 11.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) ZapB PF06005.12 ORF40980 - 0.63 10.5 7.2 0.83 10.1 1.8 2.9 4 0 0 4 4 4 0 Cell division protein ZapB Fzo_mitofusin PF04799.13 ORF40980 - 1.2 8.7 6.0 1.3 8.6 4.1 1.9 2 0 0 2 2 2 0 fzo-like conserved region Channel_Tsx PF03502.13 ORF38576 - 1.7e-82 276.9 20.8 1.9e-82 276.7 20.8 1.0 1 0 0 1 1 1 1 Nucleoside-specific channel-forming protein, Tsx LPAM_1 PF08139.12 ORF38576 - 0.0021 18.5 2.1 0.0033 17.8 2.1 1.3 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site Acyl_transf_1 PF00698.21 ORF3430 - 5.5e-16 58.9 0.0 7e-16 58.6 0.0 1.1 1 0 0 1 1 1 1 Acyl transferase domain DUF4056 PF13265.6 ORF3430 - 0.054 12.8 0.0 0.099 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4056) ILVD_EDD PF00920.21 ORF33036 - 3.3e-93 313.1 0.2 3.7e-93 312.9 0.2 1.0 1 0 0 1 1 1 1 Dehydratase family Acyl_transf_1 PF00698.21 ORF32910 - 5.5e-16 58.9 0.0 7e-16 58.6 0.0 1.1 1 0 0 1 1 1 1 Acyl transferase domain DUF4056 PF13265.6 ORF32910 - 0.054 12.8 0.0 0.099 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4056) Actin PF00022.19 ORF29725 - 3.8e-116 388.0 0.0 1.4e-115 386.1 0.0 1.7 1 1 0 1 1 1 1 Actin Phosphodiest PF01663.22 ORF28190 - 1.5e-12 47.8 0.0 1.5e-12 47.8 0.0 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 ORF28190 - 0.00027 20.4 0.0 0.0004 19.8 0.0 1.2 1 0 0 1 1 1 1 Metalloenzyme superfamily PglZ PF08665.12 ORF28190 - 0.0014 18.8 0.0 0.0018 18.4 0.0 1.2 1 0 0 1 1 1 1 PglZ domain ECH_1 PF00378.20 ORF27659 - 3.8e-24 85.4 0.1 5.1e-24 84.9 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF27659 - 6.2e-08 32.5 0.1 7.7e-08 32.2 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase RcsF PF16358.5 ORF27659 - 0.076 13.1 0.0 0.41 10.7 0.0 2.0 2 0 0 2 2 2 0 RcsF lipoprotein Agenet PF05641.12 ORF21913 - 0.11 13.0 0.0 0.28 11.7 0.0 1.7 1 0 0 1 1 1 0 Agenet domain LysR_substrate PF03466.20 ORF20144 - 0.081 12.3 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 LysR substrate binding domain Peptidase_C54 PF03416.19 ORF15934 - 2e-41 142.3 0.1 2.3e-41 142.1 0.1 1.0 1 0 0 1 1 1 1 Peptidase family C54 TFIIS_M PF07500.14 ORF11990 - 5.7e-20 71.9 0.0 8.8e-20 71.3 0.0 1.3 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain Channel_Tsx PF03502.13 ORF112212 - 1.7e-82 276.9 20.8 1.9e-82 276.7 20.8 1.0 1 0 0 1 1 1 1 Nucleoside-specific channel-forming protein, Tsx LPAM_1 PF08139.12 ORF112212 - 0.0021 18.5 2.1 0.0033 17.8 2.1 1.3 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site TPR_2 PF07719.17 ORF111902 - 7.5e-17 60.0 8.4 5.7e-05 22.9 0.0 4.7 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF111902 - 6.4e-15 54.3 6.9 1.2e-05 24.9 0.0 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 ORF111902 - 1.8e-10 40.8 7.2 7e-05 22.9 0.3 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF111902 - 6.4e-10 38.6 5.3 0.00012 21.7 1.2 4.1 3 1 1 4 4 4 2 TPR repeat TPR_14 PF13428.6 ORF111902 - 9.5e-10 38.5 6.1 0.003 18.2 0.0 4.7 2 1 3 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF111902 - 4.7e-09 35.8 5.2 0.035 14.3 0.0 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF111902 - 8.5e-08 32.7 11.1 0.0019 18.8 1.4 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF111902 - 1.9e-06 28.3 5.6 3.4e-05 24.3 0.1 3.7 3 2 0 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF111902 - 1.6e-05 25.0 5.8 1.5 9.4 0.0 5.1 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF111902 - 5.2e-05 23.5 10.2 0.31 11.4 0.3 3.6 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF111902 - 0.0015 18.4 4.1 11 6.3 0.0 4.3 2 1 1 3 3 3 2 Tetratricopeptide repeat NARP1 PF12569.8 ORF111902 - 0.0056 15.6 0.8 1.8 7.4 0.3 2.1 2 0 0 2 2 2 2 NMDA receptor-regulated protein 1 RPN7 PF10602.9 ORF111902 - 0.0078 15.9 0.9 0.062 13.0 0.1 2.5 2 1 1 3 3 3 1 26S proteasome subunit RPN7 TPR_10 PF13374.6 ORF111902 - 0.039 13.8 7.8 3.7 7.5 0.0 3.9 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF111902 - 0.11 13.2 13.1 17 6.3 0.0 5.5 5 0 0 5 5 5 0 Tetratricopeptide repeat Arg_decarbox_C PF17944.1 ORF111902 - 2.2 8.9 5.4 1.6 9.3 0.6 2.9 3 0 0 3 3 3 0 Arginine decarboxylase C-terminal helical extension zf-RING_2 PF13639.6 ORF110193 - 3.9e-08 33.5 14.1 1.2e-06 28.7 10.4 2.5 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF110193 - 1.7e-07 31.4 7.3 1.7e-07 31.4 7.3 2.1 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF110193 - 8.9e-06 25.4 6.2 0.0095 15.7 3.2 2.9 2 0 0 2 2 2 2 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF110193 - 0.0012 18.7 17.3 0.0089 15.9 12.3 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF110193 - 0.0015 18.5 3.5 0.0015 18.5 3.5 1.7 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF110193 - 0.016 15.0 15.3 0.027 14.3 9.5 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF110193 - 0.029 14.0 6.3 0.029 14.0 6.3 2.1 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF110193 - 0.031 14.1 7.0 0.031 14.1 7.0 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Syntaxin_2 PF14523.6 ORF110193 - 0.11 12.9 3.5 8 6.9 0.2 2.4 2 0 0 2 2 2 0 Syntaxin-like protein Sulfotransfer_4 PF17784.1 ORF110193 - 0.11 12.3 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Sulfotransferase domain GAT PF03127.14 ORF110193 - 0.15 12.4 2.4 11 6.4 0.5 2.7 2 0 0 2 2 2 0 GAT domain FANCL_C PF11793.8 ORF110193 - 0.23 11.6 15.4 0.24 11.6 7.5 3.0 2 2 1 3 3 3 0 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 ORF110193 - 0.81 9.6 17.1 0.13 12.1 8.9 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF110193 - 4.3 7.5 11.2 3.3 7.8 6.4 2.5 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_5 PF14634.6 ORF110193 - 6.4 6.8 14.4 2.2 8.3 7.1 2.4 2 0 0 2 2 2 0 zinc-RING finger domain zf-C3H2C3 PF17122.5 ORF110193 - 9.7 6.3 17.5 3.5 7.7 6.5 2.6 2 1 0 2 2 2 0 Zinc-finger BIV_Env PF05858.12 ORF108890 - 0.076 11.2 0.0 0.097 10.8 0.0 1.1 1 0 0 1 1 1 0 Bovine immunodeficiency virus surface protein (SU) EF-hand_7 PF13499.6 ORF105081 - 0.00011 22.6 0.1 0.001 19.4 0.0 2.4 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF105081 - 0.00024 20.4 1.4 0.0038 16.7 0.0 3.2 4 0 0 4 4 4 1 EF hand EF-hand_5 PF13202.6 ORF105081 - 0.0015 17.9 2.6 0.033 13.7 0.0 3.1 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF105081 - 0.0024 17.6 2.3 0.12 12.3 0.0 3.1 3 0 0 3 3 3 1 EF-hand domain FGE-sulfatase PF03781.16 ORF102922 - 1.6e-24 86.9 3.4 5.9e-24 85.0 2.9 1.9 2 0 0 2 2 2 1 Sulfatase-modifying factor enzyme 1 BIV_Env PF05858.12 ORF102391 - 0.076 11.2 0.0 0.097 10.8 0.0 1.1 1 0 0 1 1 1 0 Bovine immunodeficiency virus surface protein (SU) PP2C PF00481.21 ORF100686 - 1.3e-56 192.1 0.1 1.5e-56 191.9 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF100686 - 0.00014 21.6 0.4 0.00084 19.0 0.4 2.2 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF100686 - 0.00038 20.4 0.1 0.0029 17.6 0.1 1.9 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) DUF3020 PF11223.8 NODE_23484_length_879_cov_5.432464_g18229_i0reverse_frame_1 - 9.7 6.8 16.9 1.7 9.2 2.6 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3020) Pox_Ag35 PF03286.14 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 0.17 11.6 20.5 0.42 10.4 20.5 1.7 1 0 0 1 1 1 0 Pox virus Ag35 surface protein CobT PF06213.12 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 0.84 9.0 19.2 1.6 8.1 19.2 1.5 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 0.88 8.8 18.7 1.6 8.0 18.7 1.5 1 0 0 1 1 1 0 NOA36 protein DUF4820 PF16091.5 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 1.9 7.8 9.5 3.7 6.8 9.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Presenilin PF01080.17 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 3.1 6.5 12.1 4.3 6.0 12.1 1.2 1 0 0 1 1 1 0 Presenilin RNA_pol_Rpc4 PF05132.14 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 3.1 8.2 13.1 6 7.3 13.1 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 RP-C_C PF11800.8 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 4.4 7.3 8.3 7.5 6.6 8.3 1.3 1 0 0 1 1 1 0 Replication protein C C-terminal region SspB PF04386.13 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 5.4 6.9 11.0 11 5.9 11.0 1.5 1 0 0 1 1 1 0 Stringent starvation protein B PPL5 PF18168.1 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 5.5 6.2 14.1 10 5.3 14.1 1.5 1 0 0 1 1 1 0 Prim-pol family 5 DUF2076 PF09849.9 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 6.8 6.6 13.3 11 6.0 13.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DSPc PF00782.20 NODE_23451_length_879_cov_1101.674171_g14172_i1forward_frame_1 - 0.059 13.2 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain DUF2530 PF10745.9 NODE_23440_length_880_cov_83.056805_g18192_i0reverse_frame_2 - 0.14 12.4 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) TMEM154 PF15102.6 NODE_23430_length_880_cov_209.489941_g7671_i2reverse_frame_3 - 1.2 9.0 4.1 0.56 10.1 0.3 2.2 2 0 0 2 2 2 0 TMEM154 protein family Peptidase_C1 PF00112.23 NODE_23417_length_880_cov_2744.712426_g18172_i0reverse_frame_3 - 1.4e-34 120.1 0.3 2.1e-34 119.6 0.3 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 NODE_23417_length_880_cov_2744.712426_g18172_i0reverse_frame_3 - 1.3e-11 44.7 5.4 2.1e-11 44.0 5.4 1.3 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Propeptide_C1 PF08127.13 NODE_23417_length_880_cov_2744.712426_g18172_i0reverse_frame_3 - 0.18 11.7 0.6 0.33 10.9 0.6 1.4 1 0 0 1 1 1 0 Peptidase family C1 propeptide DUF4094 PF13334.6 NODE_23410_length_881_cov_4.341608_g18167_i0forward_frame_2 - 8.9 6.8 10.2 0.69 10.4 1.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4094) zf-FLZ PF04570.14 NODE_23406_length_881_cov_87.847518_g18164_i0reverse_frame_3 - 4 7.0 6.5 1.8 8.1 1.7 2.3 1 1 1 2 2 2 0 zinc-finger of the FCS-type, C2-C2 Rapsyn_N PF10579.9 NODE_23390_length_881_cov_297.957447_g18150_i0reverse_frame_3 - 0.11 12.6 0.1 0.4 10.8 0.0 2.0 3 0 0 3 3 3 0 Rapsyn N-terminal myristoylation and linker region CM2 PF03021.14 NODE_23379_length_882_cov_3.282172_g18143_i0forward_frame_3 - 0.049 13.4 0.0 0.072 12.9 0.0 1.2 1 0 0 1 1 1 0 Influenza C virus M2 protein DUF1100 PF06500.11 NODE_23379_length_882_cov_3.282172_g18143_i0forward_frame_2 - 4.1e-97 325.6 0.0 5.2e-97 325.2 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1100) Telomere_reg-2 PF10193.9 NODE_23373_length_882_cov_73.750885_g18138_i0forward_frame_2 - 0.092 13.2 0.5 0.28 11.6 0.2 1.9 2 0 0 2 2 2 0 Telomere length regulation protein UPA PF17217.3 NODE_23370_length_882_cov_109.465171_g18135_i0forward_frame_2 - 0.076 12.9 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 UPA domain EF-hand_7 PF13499.6 ORF98785 - 3.3e-23 81.9 7.9 1.5e-07 31.8 0.3 5.6 3 2 1 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF98785 - 4e-23 79.3 5.2 0.0044 16.8 0.0 7.2 7 0 0 7 7 7 7 EF-hand domain EF-hand_1 PF00036.32 ORF98785 - 1.2e-21 74.5 6.2 0.028 13.9 0.0 7.2 7 0 0 7 7 7 7 EF hand EF-hand_8 PF13833.6 ORF98785 - 4e-14 52.2 7.8 1.8e-05 24.5 0.2 6.0 5 1 1 6 6 6 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF98785 - 2e-05 23.8 4.5 1.5 8.4 0.0 5.9 6 0 0 6 6 6 2 EF hand SPARC_Ca_bdg PF10591.9 ORF98785 - 4.9e-05 23.6 2.4 0.088 13.1 0.1 3.8 2 2 2 4 4 4 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF98785 - 0.0022 17.9 3.6 0.29 11.1 0.0 4.2 4 1 1 5 5 5 1 Cytoskeletal-regulatory complex EF hand Glyco_hydro_39 PF01229.17 ORF98785 - 0.055 12.1 0.0 0.12 10.9 0.0 1.5 1 1 0 1 1 1 0 Glycosyl hydrolases family 39 PAP1 PF08601.10 ORF98785 - 0.2 11.4 0.1 0.29 10.8 0.1 1.1 1 0 0 1 1 1 0 Transcription factor PAP1 HEAT_2 PF13646.6 ORF97079 - 5e-14 52.5 11.4 3.5e-07 30.5 0.3 3.9 1 1 2 3 3 3 3 HEAT repeats HEAT PF02985.22 ORF97079 - 1.6e-10 40.3 5.7 0.14 12.4 0.0 5.1 5 0 0 5 5 5 4 HEAT repeat HEAT_EZ PF13513.6 ORF97079 - 9e-05 22.9 10.6 0.25 11.9 0.2 4.8 3 2 1 4 4 4 2 HEAT-like repeat Cnd1 PF12717.7 ORF97079 - 0.0035 17.4 0.2 7.6 6.5 0.0 3.5 1 1 1 2 2 2 2 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 ORF97079 - 0.012 15.6 2.0 0.26 11.4 0.0 3.3 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.20 ORF97079 - 0.071 11.7 0.1 1 7.9 0.0 1.9 1 1 2 3 3 3 0 Adaptin N terminal region Condensin2nSMC PF12422.8 ORF97079 - 0.17 12.1 0.0 0.74 10.0 0.0 2.0 2 0 0 2 2 2 0 Condensin II non structural maintenance of chromosomes subunit TBSV_P22 PF03558.13 ORF97079 - 0.19 11.2 0.0 0.37 10.2 0.0 1.4 1 0 0 1 1 1 0 TBSV core protein P21/P22 HEAT_PBS PF03130.16 ORF97079 - 1.4 9.8 15.5 6.6 7.7 0.3 4.5 4 0 0 4 4 4 0 PBS lyase HEAT-like repeat T2SSE PF00437.20 ORF95728 - 1.6e-41 142.1 0.7 2.1e-41 141.8 0.2 1.4 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_22 PF13401.6 ORF95728 - 0.00031 21.0 0.0 0.00099 19.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 ORF95728 - 0.00045 19.7 0.1 0.0012 18.3 0.1 1.7 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_29 PF13555.6 ORF95728 - 0.00048 19.8 0.2 0.00093 18.9 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 ORF95728 - 0.00064 19.5 1.1 0.0018 18.0 0.1 2.2 3 1 0 3 3 2 1 AAA domain AAA_16 PF13191.6 ORF95728 - 0.00088 19.7 0.6 0.00088 19.7 0.6 1.7 2 1 0 2 2 1 1 AAA ATPase domain TrwB_AAD_bind PF10412.9 ORF95728 - 0.00097 18.1 0.1 0.0026 16.7 0.0 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_23 PF13476.6 ORF95728 - 0.0014 19.2 0.1 0.0025 18.3 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 ORF95728 - 0.0024 17.9 0.0 0.01 15.9 0.0 2.0 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF95728 - 0.0042 17.6 0.0 0.0074 16.8 0.0 1.6 1 1 0 1 1 1 1 ABC transporter DUF87 PF01935.17 ORF95728 - 0.0058 16.8 0.1 0.013 15.6 0.1 1.4 1 1 0 1 1 1 1 Helicase HerA, central domain AAA_19 PF13245.6 ORF95728 - 0.0061 16.9 1.4 0.017 15.5 0.4 2.3 2 1 0 2 2 2 1 AAA domain DUF853 PF05872.12 ORF95728 - 0.0096 14.6 0.5 0.54 8.8 0.1 2.1 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) Zeta_toxin PF06414.12 ORF95728 - 0.035 13.4 0.0 0.094 12.0 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin SRP54 PF00448.22 ORF95728 - 0.037 13.6 0.1 0.066 12.8 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ResIII PF04851.15 ORF95728 - 0.043 13.8 0.0 0.08 12.9 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Kinesin PF00225.23 ORF95728 - 0.084 11.8 0.0 0.12 11.2 0.0 1.2 1 0 0 1 1 1 0 Kinesin motor domain NACHT PF05729.12 ORF95728 - 0.09 12.7 0.0 1.1 9.1 0.0 2.7 3 0 0 3 3 3 0 NACHT domain DUF2075 PF09848.9 ORF95728 - 0.097 11.9 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF95728 - 0.14 11.6 0.1 0.36 10.3 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region CbiA PF01656.23 ORF95728 - 0.19 11.8 0.5 0.48 10.5 0.5 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain EF-hand_6 PF13405.6 ORF93538 - 2.2e-15 55.2 0.0 0.00013 21.6 0.0 4.1 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF93538 - 1.4e-12 47.9 1.0 3.9e-08 33.6 0.4 2.8 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF93538 - 3.1e-12 45.1 0.2 0.00059 19.2 0.1 4.0 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF93538 - 2e-07 30.8 3.1 0.19 11.6 0.1 3.9 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF93538 - 2.7e-06 26.6 0.0 0.077 12.5 0.0 2.9 2 0 0 2 2 2 2 EF hand UPF0160 PF03690.13 ORF93538 - 0.078 12.6 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0160) SPARC_Ca_bdg PF10591.9 ORF93538 - 0.12 12.7 0.4 1 9.7 0.1 2.3 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region PRD_Mga PF08270.11 ORF93371 - 0.12 12.1 0.1 1.3 8.6 0.0 2.2 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) PRD domain YfhO PF09586.10 ORF93371 - 0.36 9.0 0.1 0.64 8.2 0.0 1.4 2 0 0 2 2 2 0 Bacterial membrane protein YfhO PRD PF00874.20 ORF93371 - 0.37 11.1 2.9 0.61 10.4 0.1 2.7 3 0 0 3 3 3 0 PRD domain DUF1298 PF06974.13 ORF87261 - 6.7e-06 26.1 0.0 1.1e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) DNApol_Exo PF18136.1 ORF87261 - 0.007 15.5 0.2 0.011 14.9 0.2 1.3 1 0 0 1 1 1 1 DNA mitochondrial polymerase exonuclease domain NTP_transferase PF00483.23 ORF84634 - 1.4e-72 244.3 0.0 1.6e-72 244.1 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 ORF84634 - 6.2e-10 39.7 0.0 8.2e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 ORF84634 - 0.00085 19.1 0.0 0.0013 18.5 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glyco_hydro_63N PF16923.5 ORF84634 - 0.11 12.6 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 63 N-terminal domain PPR PF01535.20 ORF83450 - 2.4e-33 112.0 0.1 8.2e-05 22.6 0.0 6.3 6 0 0 6 6 6 6 PPR repeat PPR_2 PF13041.6 ORF83450 - 2.5e-33 114.0 0.0 5.2e-07 29.8 0.0 5.5 2 1 4 6 6 6 6 PPR repeat family PPR_1 PF12854.7 ORF83450 - 4.3e-22 77.5 0.0 0.00029 20.5 0.0 6.3 6 0 0 6 6 6 4 PPR repeat PPR_3 PF13812.6 ORF83450 - 3.8e-19 68.5 0.0 6.5e-08 32.5 0.0 4.2 3 1 1 4 4 4 3 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF83450 - 5.5e-13 48.8 0.0 9.3e-08 31.7 0.0 2.9 2 1 1 3 3 3 2 Pentacotripeptide-repeat region of PRORP TPR_12 PF13424.6 ORF83450 - 0.001 19.3 2.1 3.2 8.1 0.1 3.6 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF83450 - 0.0013 18.2 2.3 0.0014 18.0 1.2 1.6 2 0 0 2 2 2 1 MalT-like TPR region TPR_16 PF13432.6 ORF83450 - 0.0017 18.9 5.9 0.051 14.2 0.7 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF83450 - 0.0037 17.7 1.9 1.1 10.1 0.1 4.4 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF83450 - 0.021 15.3 2.5 3.8 8.1 0.4 3.5 3 1 1 4 4 4 0 Tetratricopeptide repeat SPO22 PF08631.10 ORF83450 - 0.029 13.9 0.1 20 4.5 0.0 3.6 3 1 1 4 4 4 0 Meiosis protein SPO22/ZIP4 like SelB-wing_2 PF09106.11 ORF83450 - 0.048 13.9 0.1 15 5.9 0.0 3.8 3 1 0 3 3 3 0 Elongation factor SelB, winged helix TPR_10 PF13374.6 ORF83450 - 0.05 13.5 1.1 16 5.5 0.1 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat B12-binding_2 PF02607.17 ORF83450 - 0.081 13.4 0.3 2.1 8.8 0.1 3.1 2 1 1 3 3 3 0 B12 binding domain DUF3368 PF11848.8 ORF83450 - 0.16 11.8 0.0 4 7.3 0.0 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF3368) TPR_14 PF13428.6 ORF83450 - 0.29 12.1 7.3 17 6.6 0.4 4.9 4 1 2 6 6 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF83450 - 0.82 10.0 4.5 17 6.0 0.2 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF83450 - 1.5 9.2 13.0 20 5.6 0.4 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF83450 - 2.3 8.0 4.3 37 4.1 0.2 3.2 3 0 0 3 3 3 0 TPR repeat Copine PF07002.16 ORF81314 - 7.5e-54 182.5 0.1 1e-53 182.0 0.1 1.2 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF81314 - 0.0044 17.1 0.1 0.0082 16.3 0.1 1.5 1 0 0 1 1 1 1 vWA found in TerF C terminus QueH PF02677.14 ORF81314 - 0.18 11.9 0.9 1 9.4 0.4 2.2 2 1 0 2 2 2 0 Epoxyqueuosine reductase QueH ABC_tran PF00005.27 ORF79198 - 1.4e-09 38.6 0.7 1.3e-08 35.4 0.0 2.5 2 1 0 2 2 2 1 ABC transporter ABC_tran_Xtn PF12848.7 ORF79198 - 1.7e-06 28.0 3.2 1.7e-06 28.0 3.2 2.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF79198 - 0.082 12.7 0.5 0.19 11.5 0.0 1.8 2 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system MCU PF04678.13 ORF79198 - 0.11 12.6 5.4 1.6 8.8 0.1 2.9 3 0 0 3 3 3 0 Mitochondrial calcium uniporter DUF5615 PF18480.1 ORF79198 - 0.19 11.5 0.6 19 5.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5615) DUF192 PF02643.15 ORF78476 - 0.33 11.1 10.3 2.5 8.3 0.9 4.2 3 1 1 4 4 4 0 Uncharacterized ACR, COG1430 PCRF PF03462.18 ORF784 - 5e-50 170.1 3.6 7.4e-50 169.5 0.3 2.0 2 0 0 2 2 2 1 PCRF domain RF-1 PF00472.20 ORF784 - 3.5e-41 139.8 1.6 5.6e-41 139.1 1.6 1.3 1 0 0 1 1 1 1 RF-1 domain DUF2408 PF10303.9 ORF784 - 0.023 15.3 0.8 6.3 7.4 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2408) TcpS PF17456.2 ORF784 - 0.029 14.4 3.0 4.3 7.4 0.2 2.6 3 0 0 3 3 3 0 Toxin-coregulated pilus protein S Tup_N PF08581.10 ORF784 - 0.32 11.3 5.7 2.9 8.3 3.1 2.3 2 0 0 2 2 2 0 Tup N-terminal DUF4140 PF13600.6 ORF784 - 0.48 10.9 5.0 2.6 8.5 0.9 2.5 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Mod_r PF07200.13 ORF77440 - 8.4e-19 68.1 13.3 8.4e-19 68.1 13.3 1.9 2 0 0 2 2 2 1 Modifier of rudimentary (Mod(r)) protein UEV PF05743.13 ORF77440 - 3.3e-06 27.0 0.6 5.6e-06 26.2 0.2 1.6 2 0 0 2 2 2 1 UEV domain DUF1281 PF06924.11 ORF77440 - 0.00098 18.7 0.1 0.0017 17.9 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1281) DUF4876 PF16215.5 ORF77440 - 0.013 15.5 1.4 0.03 14.3 1.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4876) bZIP_Maf PF03131.17 ORF77440 - 2.3 8.8 7.9 0.76 10.3 1.0 2.7 2 0 0 2 2 2 0 bZIP Maf transcription factor PseudoU_synth_2 PF00849.22 ORF76420 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 2 0 0 2 2 2 0 RNA pseudouridylate synthase UvrD-helicase PF00580.21 ORF75951 - 1.7e-19 70.5 0.0 2.4e-19 70.0 0.0 1.3 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 ORF75951 - 3.6e-15 56.2 0.0 4.4e-14 52.6 0.0 1.9 1 1 1 2 2 2 1 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 ORF75951 - 2.8e-11 43.0 0.6 3.6e-05 23.5 0.1 2.5 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 ORF75951 - 1.7e-10 41.4 0.0 4.6e-10 40.0 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_12 PF13087.6 ORF75951 - 4.5e-05 23.2 0.0 0.0005 19.7 0.0 2.1 1 1 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF75951 - 0.00021 21.1 0.0 0.0016 18.2 0.0 2.2 1 1 0 1 1 1 1 Viral (Superfamily 1) RNA helicase DUF393 PF04134.12 ORF72562 - 1.1e-15 59.0 0.0 2.2e-15 58.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF393 FeThRed_A PF02941.15 ORF72562 - 4.4e-06 26.7 0.1 8.6e-06 25.8 0.1 1.5 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase variable alpha chain Redoxin PF08534.10 ORF72562 - 0.014 15.1 0.0 0.03 14.0 0.0 1.5 1 0 0 1 1 1 0 Redoxin AhpC-TSA PF00578.21 ORF72562 - 0.043 13.7 0.0 0.079 12.9 0.0 1.4 1 0 0 1 1 1 0 AhpC/TSA family VitK2_biosynth PF02621.14 ORF70495 - 0.018 14.6 0.0 0.026 14.0 0.0 1.2 1 0 0 1 1 1 0 Menaquinone biosynthesis SHIPPO-rpt PF07004.12 ORF6931 - 0.0025 18.7 25.8 0.053 14.5 1.0 5.7 5 1 0 5 5 5 3 Sperm-tail PG-rich repeat UDG PF03167.19 ORF68186 - 4e-21 75.6 0.0 6.4e-21 75.0 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Peripla_BP_5 PF13433.6 ORF68186 - 0.1 11.6 0.0 0.16 10.9 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein domain 2-Hacid_dh_C PF02826.19 ORF67735 - 3.1e-46 157.0 0.0 3.7e-46 156.7 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF67735 - 2.5e-20 72.5 0.0 3.2e-20 72.2 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 ORF67735 - 0.0013 19.0 0.0 0.0038 17.4 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase S1-P1_nuclease PF02265.16 ORF67624 - 8.3e-20 71.7 0.0 1e-19 71.4 0.0 1.1 1 0 0 1 1 1 1 S1/P1 Nuclease Ank_2 PF12796.7 ORF66589 - 4.7e-31 107.2 0.0 3.2e-10 40.4 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF66589 - 6.3e-27 93.6 0.2 3.8e-09 36.9 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF66589 - 1.7e-22 78.8 1.7 0.00066 20.0 0.0 6.1 6 0 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 ORF66589 - 3e-20 70.1 0.1 0.0029 18.0 0.0 6.3 6 0 0 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 ORF66589 - 9.9e-19 67.2 5.0 8.7e-06 25.9 0.1 5.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Imm_superinfect PF14373.6 ORF66589 - 0.16 11.9 2.3 26 4.9 0.2 4.1 4 0 0 4 4 4 0 Superinfection immunity protein PEX11 PF05648.14 ORF65711 - 0.02 14.3 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 Peroxisomal biogenesis factor 11 (PEX11) MORN PF02493.20 ORF63391 - 7.5e-44 145.1 66.0 1.1e-08 34.4 1.7 9.5 10 0 0 10 10 10 7 MORN repeat DUF3048_C PF17479.2 ORF63391 - 0.47 10.9 20.8 4.5 7.7 0.1 4.6 1 1 2 4 4 4 0 Protein of unknown function (DUF3048) C-terminal domain ABATE PF07336.11 ORF57921 - 5.9 7.6 9.0 17 6.1 9.0 2.0 1 1 0 1 1 1 0 Putative stress-induced transcription regulator Abhydrolase_2 PF02230.16 ORF57350 - 3.2e-08 33.7 0.0 3.4e-07 30.3 0.0 2.1 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF57350 - 1.9e-06 28.7 0.2 2.8e-06 28.1 0.2 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family FSH1 PF03959.13 ORF57350 - 3.8e-06 26.7 0.0 1.9e-05 24.5 0.0 1.8 1 1 0 1 1 1 1 Serine hydrolase (FSH1) DLH PF01738.18 ORF57350 - 3e-05 23.7 0.0 5.3e-05 22.9 0.0 1.3 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 ORF57350 - 0.00017 21.0 1.5 0.12 11.6 0.2 3.0 2 1 1 3 3 3 1 Serine aminopeptidase, S33 Cutinase PF01083.22 ORF57350 - 0.046 13.7 0.0 0.074 13.0 0.0 1.3 1 0 0 1 1 1 0 Cutinase Abhydrolase_1 PF00561.20 ORF57350 - 0.048 13.3 0.0 0.21 11.2 0.0 1.9 1 1 1 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF57350 - 0.055 13.6 0.0 0.097 12.8 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein PE-PPE PF08237.11 ORF57350 - 0.1 12.1 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 PE-PPE domain DUF2271 PF10029.9 ORF57350 - 0.13 11.8 0.1 0.21 11.2 0.1 1.2 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) zf-RING_2 PF13639.6 ORF57069 - 4.4e-09 36.5 5.3 4.4e-09 36.5 5.3 2.1 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF57069 - 2.6e-05 23.8 3.7 9.6e-05 22.0 3.7 2.0 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF57069 - 7.1e-05 22.6 4.5 7.1e-05 22.6 4.5 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF57069 - 0.00013 22.2 2.3 0.00013 22.2 2.3 2.0 2 0 0 2 2 2 1 RING-H2 zinc finger domain PHD PF00628.29 ORF57069 - 0.0026 17.6 5.3 0.0026 17.6 5.3 1.6 2 0 0 2 2 2 1 PHD-finger Zn_ribbon_17 PF17120.5 ORF57069 - 0.0067 16.0 5.2 0.0067 16.0 5.2 2.1 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 ORF57069 - 0.011 15.8 0.7 0.011 15.8 0.7 2.2 2 1 0 2 2 2 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF57069 - 0.02 14.9 4.8 0.046 13.8 4.8 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 ORF57069 - 0.033 14.3 4.3 0.033 14.3 4.3 1.9 2 0 0 2 2 1 0 RING-variant domain zf-RING_5 PF14634.6 ORF57069 - 1.2 9.1 11.3 0.1 12.6 6.1 1.9 2 0 0 2 2 2 0 zinc-RING finger domain Herpes_LMP1 PF05297.11 ORF57069 - 1.6 7.8 4.2 2.3 7.3 4.2 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) zf-RING_4 PF14570.6 ORF57069 - 1.8 8.4 11.3 0.16 11.8 6.7 1.6 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_2 PF13923.6 ORF57069 - 1.9 8.4 10.1 0.19 11.6 4.7 2.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) EamA PF00892.20 ORF55855 - 7e-10 39.2 17.5 1.4e-06 28.5 5.2 2.2 2 0 0 2 2 2 2 EamA-like transporter family zf-MYST PF17772.1 ORF55855 - 0.089 12.4 0.0 0.51 10.0 0.0 2.1 2 0 0 2 2 2 0 MYST family zinc finger domain TPT PF03151.16 ORF55855 - 1.4 8.2 7.5 4.7 6.5 2.4 2.4 2 1 0 2 2 2 0 Triose-phosphate Transporter family HypA PF01155.19 ORF53356 - 0.0019 18.2 1.7 0.074 13.1 0.8 2.2 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF35_N PF12172.8 ORF53356 - 0.019 14.8 4.9 5 7.1 0.5 3.7 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) NMD3 PF04981.13 ORF53356 - 0.075 12.5 1.0 0.32 10.4 0.3 2.1 2 0 0 2 2 2 0 NMD3 family DZR PF12773.7 ORF53356 - 0.13 12.3 9.0 2.2 8.4 0.2 2.6 2 1 0 2 2 2 0 Double zinc ribbon ADK_lid PF05191.14 ORF53356 - 0.27 11.3 3.4 1.7 8.7 1.3 2.5 2 0 0 2 2 2 0 Adenylate kinase, active site lid Zn-ribbon_8 PF09723.10 ORF53356 - 0.45 10.7 9.5 0.74 10.0 1.4 2.9 2 1 1 3 3 3 0 Zinc ribbon domain GATA PF00320.27 ORF53356 - 0.53 9.9 6.4 9.6 5.9 0.0 3.2 2 1 0 2 2 2 0 GATA zinc finger zf-RING_2 PF13639.6 ORF53356 - 2.4 8.6 9.1 0.45 10.9 2.5 2.3 2 0 0 2 2 2 0 Ring finger domain zf-ribbon_3 PF13248.6 ORF53356 - 2.7 7.5 18.7 0.77 9.2 1.4 3.7 4 0 0 4 4 4 0 zinc-ribbon domain zf-C3HC4_3 PF13920.6 ORF53356 - 4.8 7.1 7.5 3 7.8 1.4 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Ribosomal_L32p PF01783.23 ORF53356 - 6.2 7.2 6.2 48 4.3 0.0 3.4 2 1 0 2 2 2 0 Ribosomal L32p protein family 2-Hacid_dh_C PF02826.19 ORF52572 - 3.1e-46 157.0 0.0 3.7e-46 156.7 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF52572 - 2.5e-20 72.5 0.0 3.2e-20 72.2 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 ORF52572 - 0.0013 19.0 0.0 0.0038 17.4 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase ubiquitin PF00240.23 ORF50287 - 7.7e-111 362.0 11.5 5.1e-28 96.6 0.1 4.0 4 0 0 4 4 4 4 Ubiquitin family Rad60-SLD PF11976.8 ORF50287 - 4.1e-52 173.9 13.4 9.9e-14 50.9 0.5 4.0 4 0 0 4 4 4 4 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF50287 - 1.7e-18 66.8 8.6 0.00086 19.7 0.0 5.9 4 4 0 4 4 4 4 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF50287 - 5.4e-16 58.7 2.1 0.024 14.7 0.0 5.3 4 4 0 4 4 4 4 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF50287 - 2.4e-14 53.7 0.6 0.051 14.1 0.1 4.2 1 1 3 4 4 4 4 DUF2407 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF50287 - 3.9e-14 52.8 2.8 0.0069 16.7 0.1 4.1 4 0 0 4 4 4 4 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF50287 - 2.2e-10 40.3 0.1 0.46 10.5 0.0 4.2 4 0 0 4 4 4 4 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF50287 - 4.4e-08 33.1 16.6 0.9 9.6 0.2 7.8 5 3 3 8 8 8 3 Ubiquitin-like domain UDP-g_GGTase PF06427.11 ORF50287 - 0.0067 16.5 0.5 28 4.9 0.0 3.2 3 0 0 3 3 3 0 UDP-glucose:Glycoprotein Glucosyltransferase DUF969 PF06149.12 ORF50287 - 0.008 15.6 0.3 2.9 7.2 0.0 3.5 3 1 1 4 4 4 1 Protein of unknown function (DUF969) Antimicrobial_7 PF08102.11 ORF50287 - 0.1 12.9 2.7 23 5.3 0.1 3.7 4 0 0 4 4 4 0 Scorpion antimicrobial peptide Plug_translocon PF10559.9 ORF50287 - 0.13 12.1 0.0 12 5.8 0.0 3.4 4 0 0 4 4 4 0 Plug domain of Sec61p Coagulin PF02035.15 ORF50287 - 0.32 10.9 1.7 9.2 6.1 0.0 2.9 3 0 0 3 3 3 0 Coagulin ASH PF15780.5 ORF49994 - 5.8e-08 32.9 0.1 0.0043 17.2 0.0 2.5 2 1 0 2 2 2 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin PapD-like PF14874.6 ORF49994 - 4.4e-06 26.8 0.0 0.00011 22.3 0.0 2.1 2 0 0 2 2 2 1 Flagellar-associated PapD-like FoP_duplication PF13865.6 ORF49994 - 0.12 13.0 0.4 0.23 12.0 0.4 1.5 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 TPR_1 PF00515.28 ORF48364 - 1.7e-06 27.6 0.0 1e-05 25.2 0.0 2.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF48364 - 7.2e-06 26.0 0.0 0.19 12.2 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF48364 - 1.2e-05 25.0 0.0 6.2e-05 22.8 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF48364 - 0.00043 20.9 0.1 0.0019 18.9 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF48364 - 0.0055 16.8 0.1 0.017 15.3 0.0 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF48364 - 0.017 15.6 0.0 0.56 10.7 0.2 2.4 1 1 1 2 2 2 0 Tetratricopeptide repeat SAM_3 PF18016.1 ORF48364 - 0.029 14.2 0.0 0.065 13.1 0.0 1.5 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) TPR_6 PF13174.6 ORF48364 - 0.034 14.8 0.0 0.2 12.4 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF48364 - 0.048 13.9 0.0 0.22 11.8 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF48364 - 0.059 13.4 0.0 0.14 12.3 0.0 1.6 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat TPR_16 PF13432.6 ORF48364 - 0.14 12.8 0.2 0.66 10.7 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat PARP PF00644.20 ORF38587 - 6.6e-10 38.9 0.0 1e-09 38.3 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain 2OG-FeII_Oxy_2 PF13532.6 ORF37444 - 5.1e-21 75.7 0.0 7.6e-21 75.2 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF37444 - 0.064 13.8 0.0 0.11 13.0 0.0 1.3 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Tetraspanin PF00335.20 ORF37444 - 0.11 12.2 2.7 0.15 11.8 2.7 1.1 1 0 0 1 1 1 0 Tetraspanin family CorC_HlyC PF03471.17 ORF37444 - 0.13 12.2 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Transporter associated domain S1-P1_nuclease PF02265.16 ORF36773 - 6.5e-19 68.7 0.0 1.3e-18 67.8 0.0 1.5 1 1 0 1 1 1 1 S1/P1 Nuclease S1-P1_nuclease PF02265.16 ORF30755 - 6.5e-19 68.7 0.0 1.3e-18 67.8 0.0 1.5 1 1 0 1 1 1 1 S1/P1 Nuclease FMO-like PF00743.19 ORF24588 - 3.6e-21 75.2 6.9 4.2e-18 65.1 2.8 2.3 2 1 0 2 2 2 2 Flavin-binding monooxygenase-like K_oxygenase PF13434.6 ORF24588 - 3.8e-07 29.6 0.0 8.5e-06 25.1 0.0 2.0 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_3 PF13738.6 ORF24588 - 0.0002 20.7 0.1 0.00044 19.6 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF24588 - 0.0003 20.1 0.0 0.0011 18.3 0.0 1.8 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF24588 - 0.0041 17.3 0.0 0.0092 16.2 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 ORF24588 - 0.049 13.6 0.1 0.52 10.3 0.1 2.2 1 1 0 1 1 1 0 FAD-NAD(P)-binding DAO PF01266.24 ORF24588 - 0.22 11.1 0.3 10 5.6 0.3 2.1 1 1 1 2 2 2 0 FAD dependent oxidoreductase FMO-like PF00743.19 ORF23722 - 3.6e-21 75.2 6.9 4.2e-18 65.1 2.8 2.3 2 1 0 2 2 2 2 Flavin-binding monooxygenase-like K_oxygenase PF13434.6 ORF23722 - 3.8e-07 29.6 0.0 8.5e-06 25.1 0.0 2.0 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_3 PF13738.6 ORF23722 - 0.0002 20.7 0.1 0.00044 19.6 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF23722 - 0.0003 20.1 0.0 0.0011 18.3 0.0 1.8 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF23722 - 0.0041 17.3 0.0 0.0092 16.2 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 ORF23722 - 0.049 13.6 0.1 0.52 10.3 0.1 2.2 1 1 0 1 1 1 0 FAD-NAD(P)-binding DAO PF01266.24 ORF23722 - 0.22 11.1 0.3 10 5.6 0.3 2.1 1 1 1 2 2 2 0 FAD dependent oxidoreductase Glyco_hydro_31 PF01055.26 ORF23372 - 1e-16 61.2 0.2 1.8e-16 60.4 0.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Glyco_hydro_5_C PF18564.1 ORF23053 - 1.1e-12 48.3 0.0 1.9e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Glycoside hydrolase family 5 C-terminal domain Cellulase PF00150.18 ORF23053 - 2.4e-06 27.2 0.0 3.1e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) malic PF00390.19 ORF22503 - 1.9e-19 70.1 0.0 4e-16 59.3 0.1 2.4 1 1 1 2 2 2 2 Malic enzyme, N-terminal domain RIIa PF02197.17 ORF22503 - 2.2e-08 33.6 0.0 3.7e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit Arm-DNA-bind_4 PF14657.6 ORF22503 - 0.11 12.2 0.5 0.23 11.3 0.5 1.5 1 0 0 1 1 1 0 Arm DNA-binding domain 2-Hacid_dh_C PF02826.19 ORF22442 - 3.1e-46 157.0 0.0 3.7e-46 156.7 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF22442 - 2.5e-20 72.5 0.0 3.2e-20 72.2 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 ORF22442 - 0.0013 19.0 0.0 0.0038 17.4 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase S1-P1_nuclease PF02265.16 ORF17954 - 8.3e-20 71.7 0.0 1e-19 71.4 0.0 1.1 1 0 0 1 1 1 1 S1/P1 Nuclease Mito_carr PF00153.27 ORF110983 - 2.5e-56 187.6 1.2 5.4e-19 67.9 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF1490 PF07371.12 ORF104877 - 0.13 12.3 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) DUF4179 PF13786.6 ORF104877 - 1.6 9.3 4.2 0.75 10.3 1.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4179) adh_short_C2 PF13561.6 ORF10432 - 3e-53 180.8 0.1 1.7e-51 175.0 0.1 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF10432 - 1.9e-49 167.8 0.0 2.7e-49 167.3 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF10432 - 1.3e-06 28.4 0.0 2.7e-06 27.4 0.0 1.4 1 1 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF10432 - 0.15 11.1 0.0 0.22 10.6 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 2-Hacid_dh_C PF02826.19 ORF103486 - 3.1e-46 157.0 0.0 3.7e-46 156.7 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF103486 - 2.5e-20 72.5 0.0 3.2e-20 72.2 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 ORF103486 - 0.0013 19.0 0.0 0.0038 17.4 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase GGDEF PF00990.21 NODE_23669_length_874_cov_2.502980_g18384_i0reverse_frame_1 - 6.8e-38 129.9 0.0 1e-37 129.4 0.0 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain EAL PF00563.20 NODE_23669_length_874_cov_2.502980_g18384_i0reverse_frame_1 - 8.4e-29 100.8 0.2 1.2e-28 100.3 0.2 1.2 1 0 0 1 1 1 1 EAL domain GGDEF_2 PF17853.1 NODE_23669_length_874_cov_2.502980_g18384_i0reverse_frame_1 - 0.03 14.6 0.1 0.091 13.0 0.0 1.8 2 0 0 2 2 2 0 GGDEF-like domain Tmemb_55A PF09788.9 NODE_23669_length_874_cov_2.502980_g18384_i0forward_frame_1 - 0.13 11.3 0.1 0.19 10.8 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 55A DcuC PF03606.15 NODE_23668_length_874_cov_2.890346_g18383_i0reverse_frame_1 - 5.6e-50 170.1 18.1 6.7e-50 169.9 18.1 1.1 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier Oxidored_q5_N PF01059.17 NODE_23668_length_874_cov_2.890346_g18383_i0reverse_frame_1 - 0.013 15.5 0.4 0.013 15.5 0.4 2.3 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus 2-oxogl_dehyd_N PF16078.5 NODE_23592_length_876_cov_3.380499_g18318_i0reverse_frame_1 - 2.4e-17 62.3 1.0 4.5e-16 58.2 0.3 2.5 2 0 0 2 2 2 2 2-oxoglutarate dehydrogenase N-terminus EF-hand_5 PF13202.6 NODE_23555_length_877_cov_5.255344_g18288_i0reverse_frame_3 - 0.0066 15.9 0.5 0.081 12.5 0.0 2.7 2 0 0 2 2 2 1 EF hand # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks54.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks54.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks54.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks54.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4093 PF13331.6 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_2 - 0.14 12.6 4.4 0.34 11.4 4.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4093) DSPc PF00782.20 NODE_23451_length_879_cov_1101.674171_g14172_i1forward_frame_3 - 2.5e-07 30.6 0.1 4.3e-07 29.8 0.1 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PALP PF00291.25 ORF94520 - 4.9e-07 29.4 0.0 8e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TAA-Trp-ring PF15401.6 ORF88636 - 0.055 13.9 1.4 0.068 13.6 0.2 1.8 2 0 0 2 2 2 0 Tryptophan-ring motif of head of Trimeric autotransporter adhesin Mitochondr_Som1 PF11093.8 ORF88636 - 0.12 12.3 0.0 0.33 11.0 0.0 1.7 1 0 0 1 1 1 0 Mitochondrial export protein Som1 Phage_terminase PF10668.9 ORF88636 - 4.5 7.4 6.0 0.36 10.9 0.6 2.0 3 0 0 3 3 3 0 Phage terminase small subunit DeoC PF01791.9 ORF87292 - 7.2e-58 196.0 0.1 8.3e-58 195.8 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase Fibroin_P25 PF07294.11 ORF87292 - 0.17 11.9 0.0 0.27 11.3 0.0 1.2 1 0 0 1 1 1 0 Fibroin P25 PseudoU_synth_2 PF00849.22 ORF87012 - 1.8e-06 28.1 0.0 2.7e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF1601 PF07671.11 ORF87012 - 0.018 14.9 0.1 0.052 13.4 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1601) PseudoU_synth_2 PF00849.22 ORF85125 - 1.8e-06 28.1 0.0 2.7e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF1601 PF07671.11 ORF85125 - 0.018 14.9 0.1 0.052 13.4 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1601) PPR_3 PF13812.6 ORF83452 - 1.6e-34 117.8 0.0 1.3e-08 34.7 0.0 5.8 2 1 4 6 6 6 6 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF83452 - 7.2e-34 115.7 0.8 1.9e-10 40.7 0.0 6.2 5 1 1 6 6 6 6 PPR repeat family PPR PF01535.20 ORF83452 - 1.7e-24 84.3 2.9 1.2e-05 25.2 0.0 6.9 6 1 0 6 6 6 4 PPR repeat PPR_1 PF12854.7 ORF83452 - 1.2e-22 79.3 0.7 2.8e-06 26.9 0.0 7.5 7 0 0 7 7 7 6 PPR repeat PPR_long PF17177.4 ORF83452 - 1.4e-14 54.0 0.0 5.4e-08 32.5 0.0 3.1 2 1 0 3 3 3 2 Pentacotripeptide-repeat region of PRORP TPR_4 PF07721.14 ORF83452 - 2e-05 24.7 2.2 1.8 9.4 0.0 4.3 4 0 0 4 4 3 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF83452 - 0.0025 17.3 1.0 0.15 11.4 0.3 2.5 1 1 1 2 2 2 1 MalT-like TPR region TPR_14 PF13428.6 ORF83452 - 0.0062 17.3 4.9 6.5 7.8 0.3 4.5 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF83452 - 0.0069 16.2 2.0 0.46 10.4 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat Ank_4 PF13637.6 ORF83452 - 0.02 15.4 0.1 0.092 13.4 0.0 2.0 2 1 0 2 2 2 0 Ankyrin repeats (many copies) TPR_12 PF13424.6 ORF83452 - 0.031 14.6 0.7 0.57 10.5 0.1 3.0 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF83452 - 0.11 13.0 4.4 14 6.3 0.7 3.3 3 1 1 4 4 4 0 Tetratricopeptide repeat Band_7 PF01145.25 ORF82725 - 2.3e-29 102.7 0.0 3.3e-29 102.1 0.0 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family MetOD1 PF18546.1 ORF82725 - 0.0083 16.1 0.2 0.57 10.1 0.0 2.3 2 0 0 2 2 2 1 Metanogen output domain 1 Band_7_C PF16200.5 ORF82725 - 0.018 15.1 0.0 0.049 13.7 0.0 1.7 1 0 0 1 1 1 0 C-terminal region of band_7 SCAB_CC PF16712.5 ORF82725 - 0.042 13.7 1.4 0.074 12.9 1.4 1.4 1 0 0 1 1 1 0 Coiled-coil regions of plant-specific actin-binding protein MLTR_LBD PF17765.1 ORF82725 - 0.082 13.0 0.0 0.22 11.7 0.0 1.7 2 1 0 2 2 2 0 MmyB-like transcription regulator ligand binding domain FliL PF03748.14 ORF82725 - 0.11 13.1 0.1 0.24 12.0 0.1 1.6 1 0 0 1 1 1 0 Flagellar basal body-associated protein FliL V-ATPase_G PF03179.15 ORF82725 - 0.27 11.8 4.7 0.76 10.3 2.5 2.5 2 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit DEAD PF00270.29 ORF82415 - 1.4e-11 44.5 0.0 1.8e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase EMP24_GP25L PF01105.24 ORF81610 - 0.13 12.2 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD PTE PF02126.18 ORF80202 - 6.7e-143 475.5 0.5 7.4e-143 475.4 0.5 1.0 1 0 0 1 1 1 1 Phosphotriesterase family TAL_effector PF03377.13 ORF80202 - 0.16 12.3 0.3 0.48 10.8 0.0 1.9 2 0 0 2 2 2 0 TAL effector repeat MaoC_dehydratas PF01575.19 ORF77081 - 1.1e-26 92.7 0.0 1.8e-26 92.1 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 ORF77081 - 7.2e-06 26.2 0.0 2.7e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase PLAC8 PF04749.17 ORF76797 - 1.5e-11 45.2 11.5 1.5e-11 45.2 11.5 2.1 2 0 0 2 2 2 1 PLAC8 family Phage_holin_3_6 PF07332.11 ORF76797 - 0.01 15.9 1.1 0.11 12.5 0.1 2.5 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III SecY PF00344.20 ORF76797 - 0.012 14.9 0.2 0.058 12.6 0.0 1.8 2 0 0 2 2 2 0 SecY translocase DUF4191 PF13829.6 ORF76797 - 0.15 11.4 0.6 12 5.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) PIRT PF15099.6 ORF76797 - 0.18 11.4 0.3 0.46 10.1 0.1 1.7 2 0 0 2 2 2 0 Phosphoinositide-interacting protein family EphA2_TM PF14575.6 ORF76797 - 0.24 12.3 0.4 25 5.8 0.2 2.8 3 0 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain DUF4106 PF13388.6 ORF76797 - 1.2 8.3 4.7 1.6 7.9 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) DUF202 PF02656.15 ORF76797 - 1.5 9.3 6.7 0.36 11.3 0.3 2.7 3 1 0 3 3 3 0 Domain of unknown function (DUF202) ABC_tran PF00005.27 ORF74160 - 1.1e-28 100.4 0.0 2.4e-28 99.4 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF74160 - 7.1e-06 26.0 1.0 0.0019 18.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 ORF74160 - 0.0084 16.5 0.0 0.013 15.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF74160 - 0.011 15.6 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 ORF74160 - 0.012 15.3 0.1 0.027 14.2 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SbcCD_C PF13558.6 ORF74160 - 0.06 13.6 0.4 0.99 9.7 0.2 2.5 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 ORF74160 - 0.1 13.1 2.0 0.12 12.8 0.3 1.9 1 1 1 2 2 2 0 AAA domain Rad17 PF03215.15 ORF74160 - 0.15 12.0 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain cobW PF02492.19 ORF74160 - 0.23 11.0 0.5 0.4 10.3 0.1 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain NAD_kinase PF01513.21 ORF72579 - 8.3e-80 268.1 0.0 9.9e-80 267.8 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase EF1G PF00647.19 ORF7013 - 1.5e-41 140.7 0.1 2.5e-41 140.1 0.1 1.3 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_C PF00043.25 ORF7013 - 1.4e-13 50.9 0.8 2.6e-13 50.0 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF7013 - 1.5e-05 24.9 0.0 3e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF7013 - 1.8e-05 24.8 0.0 4.9e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Ribosomal_60s PF00428.19 ORF7013 - 0.01 16.4 5.7 0.022 15.4 5.7 1.5 1 0 0 1 1 1 0 60s Acidic ribosomal protein SHIPPO-rpt PF07004.12 ORF69908 - 0.00017 22.4 21.5 0.26 12.3 2.3 6.2 5 2 0 5 5 5 4 Sperm-tail PG-rich repeat ApbE PF02424.15 ORF6984 - 0.048 13.2 0.1 0.23 11.0 0.1 2.0 1 1 1 2 2 2 0 ApbE family RmuC PF02646.16 ORF69368 - 7.8e-94 314.1 0.5 9e-94 313.9 0.5 1.0 1 0 0 1 1 1 1 RmuC family PPR_2 PF13041.6 ORF62313 - 4.7e-08 33.1 0.4 0.0086 16.3 0.1 3.5 3 0 0 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF62313 - 0.00045 20.2 0.0 0.098 12.7 0.0 2.6 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF62313 - 0.005 17.0 0.8 25 5.4 0.1 3.8 4 0 0 4 4 4 1 PPR repeat Glyco_hydro_31 PF01055.26 ORF57187 - 1e-16 61.2 0.2 1.7e-16 60.4 0.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 AAA_12 PF13087.6 ORF56255 - 7.1e-54 182.5 0.0 8.6e-54 182.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF56255 - 0.016 15.0 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain Cupin_2 PF07883.11 ORF5594 - 6e-07 29.1 0.0 3e-06 26.9 0.0 2.1 2 1 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 ORF5594 - 6.8e-06 25.8 0.1 0.00016 21.3 0.1 2.1 2 0 0 2 2 2 1 Cupin Cupin_3 PF05899.12 ORF5594 - 0.00034 20.3 0.1 0.001 18.7 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF861) Katanin_con80 PF13925.6 ORF53746 - 8.3e-14 51.9 0.1 1.1e-13 51.6 0.1 1.2 1 0 0 1 1 1 1 con80 domain of Katanin CitG PF01874.16 ORF53661 - 3.8e-84 282.7 0.0 4.3e-84 282.5 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase DUF3306 PF11748.8 ORF49919 - 0.67 10.8 4.8 0.3 11.9 0.6 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3306) DeoC PF01791.9 ORF4806 - 7.2e-58 196.0 0.1 8.3e-58 195.8 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase Fibroin_P25 PF07294.11 ORF4806 - 0.17 11.9 0.0 0.27 11.3 0.0 1.2 1 0 0 1 1 1 0 Fibroin P25 DNA_pol3_a_NI PF14480.6 ORF4217 - 0.013 15.4 0.0 0.031 14.3 0.0 1.5 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus I MFS_1 PF07690.16 ORF40360 - 2.9e-08 33.0 7.0 3.6e-07 29.4 5.9 2.0 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF40360 - 0.013 14.1 5.7 0.011 14.3 4.3 1.6 1 1 0 1 1 1 0 MFS/sugar transport protein MFS_1_like PF12832.7 ORF40360 - 0.041 12.7 6.1 0.025 13.4 4.0 1.6 2 0 0 2 2 2 0 MFS_1 like family NIL PF09383.10 ORF40360 - 0.12 12.2 0.0 4 7.4 0.0 2.3 2 0 0 2 2 2 0 NIL domain Pkinase PF00069.25 ORF40011 - 5.1e-68 229.3 1.3 5.9e-68 229.1 1.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF40011 - 1.9e-44 151.9 0.4 2.4e-44 151.6 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF40011 - 7.4e-05 22.2 0.0 0.00012 21.5 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF40011 - 0.001 18.0 0.0 0.0017 17.2 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase RPW8 PF05659.11 ORF40011 - 0.0025 17.5 0.4 0.0069 16.1 0.4 1.7 1 0 0 1 1 1 1 Arabidopsis broad-spectrum mildew resistance protein RPW8 Kdo PF06293.14 ORF40011 - 0.0063 15.9 0.8 0.014 14.8 0.2 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF40011 - 0.009 15.0 0.6 0.031 13.2 0.3 2.0 2 1 0 2 2 2 1 Haspin like kinase domain APH PF01636.23 ORF40011 - 0.03 14.3 0.0 4.3 7.2 0.0 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family PPR_2 PF13041.6 ORF39624 - 4.7e-08 33.1 0.4 0.0086 16.3 0.1 3.5 3 0 0 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF39624 - 0.00045 20.2 0.0 0.098 12.7 0.0 2.6 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF39624 - 0.005 17.0 0.8 25 5.4 0.1 3.8 4 0 0 4 4 4 1 PPR repeat P_C10 PF14974.6 ORF39285 - 0.0097 16.0 0.0 0.032 14.3 0.0 1.8 2 0 0 2 2 2 1 Protein C10 MaoC_dehydratas PF01575.19 ORF36557 - 1.1e-26 92.7 0.0 1.8e-26 92.1 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 ORF36557 - 7.2e-06 26.2 0.0 2.7e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase FAD_binding_5 PF00941.21 ORF32696 - 2.7e-51 173.7 0.0 3.8e-51 173.2 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 ORF32696 - 1.5e-24 86.1 0.1 4.9e-24 84.5 0.0 1.8 2 0 0 2 2 2 1 CO dehydrogenase flavoprotein C-terminal domain MFS_1 PF07690.16 ORF28685 - 2.9e-08 33.0 7.0 3.6e-07 29.4 5.9 2.0 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF28685 - 0.013 14.1 5.7 0.011 14.3 4.3 1.6 1 1 0 1 1 1 0 MFS/sugar transport protein MFS_1_like PF12832.7 ORF28685 - 0.041 12.7 6.1 0.025 13.4 4.0 1.6 2 0 0 2 2 2 0 MFS_1 like family NIL PF09383.10 ORF28685 - 0.12 12.2 0.0 4 7.4 0.0 2.3 2 0 0 2 2 2 0 NIL domain GDPD PF03009.17 ORF22949 - 0.18 11.5 0.0 0.7 9.6 0.0 1.7 1 1 0 1 1 1 0 Glycerophosphoryl diester phosphodiesterase family MFS_1 PF07690.16 ORF22609 - 2.9e-08 33.0 7.0 3.6e-07 29.4 5.9 2.0 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF22609 - 0.013 14.1 5.7 0.011 14.3 4.3 1.6 1 1 0 1 1 1 0 MFS/sugar transport protein MFS_1_like PF12832.7 ORF22609 - 0.041 12.7 6.1 0.025 13.4 4.0 1.6 2 0 0 2 2 2 0 MFS_1 like family NIL PF09383.10 ORF22609 - 0.12 12.2 0.0 4 7.4 0.0 2.3 2 0 0 2 2 2 0 NIL domain RCC1_2 PF13540.6 ORF22600 - 2.1e-08 33.7 11.7 0.055 13.3 0.0 5.2 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Ysc84 PF04366.12 ORF22600 - 0.019 14.7 2.2 0.1 12.3 2.2 2.3 1 1 0 1 1 1 0 Las17-binding protein actin regulator SIS_2 PF13580.6 ORF22600 - 0.19 11.7 4.9 12 5.9 0.0 3.7 2 1 2 4 4 4 0 SIS domain TPR_MLP1_2 PF07926.12 ORF21013 - 0.00026 21.1 13.9 0.00026 21.1 13.9 3.6 2 1 2 4 4 4 1 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 ORF21013 - 0.31 9.9 36.0 0.82 8.5 13.9 2.8 1 1 2 3 3 3 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF21013 - 1.6 8.8 14.1 1.3 9.1 3.7 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 ORF21013 - 2.9 7.9 13.7 3.9 7.5 0.9 3.3 1 1 1 3 3 3 0 Laminin Domain II Filament PF00038.21 ORF21013 - 3.5 7.1 34.6 0.053 13.1 10.0 2.6 2 1 0 3 3 3 0 Intermediate filament protein V_ATPase_I PF01496.19 ORF21013 - 4.5 5.1 18.4 1.5 6.7 5.1 2.2 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family BLOC1_2 PF10046.9 ORF21013 - 7.1 7.0 19.7 2.9 8.3 0.9 4.2 3 1 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SET PF00856.28 ORF14996 - 0.0011 19.4 0.0 0.002 18.6 0.0 1.4 1 0 0 1 1 1 1 SET domain JAB PF01398.21 ORF12317 - 1.8e-14 53.7 0.0 5.2e-14 52.2 0.0 1.7 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 ORF12317 - 1.1e-12 48.3 1.3 2.3e-12 47.3 1.3 1.5 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function ATP-synt_A PF00119.20 ORF112507 - 1.2e-44 152.8 5.2 1.5e-44 152.5 5.2 1.1 1 0 0 1 1 1 1 ATP synthase A chain CorC_HlyC PF03471.17 ORF109425 - 1.1e-23 83.0 1.2 2.3e-23 82.0 0.0 2.2 3 0 0 3 3 3 1 Transporter associated domain CBS PF00571.28 ORF109425 - 2.3e-15 56.7 2.1 7e-08 32.8 0.2 2.5 2 0 0 2 2 2 2 CBS domain CoA_transf_3 PF02515.17 ORF108833 - 2.5e-32 112.4 0.0 2.9e-32 112.2 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III Asp PF00026.23 ORF108584 - 6e-17 62.0 0.5 7.5e-17 61.7 0.5 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF108584 - 1.4e-05 25.0 0.0 2.2e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal DGOK PF05035.12 ORF105755 - 4e-97 324.5 0.4 4.5e-97 324.4 0.4 1.0 1 0 0 1 1 1 1 2-keto-3-deoxy-galactonokinase DUF1500 PF07389.12 NODE_23781_length_871_cov_3.632775_g18478_i0forward_frame_1 - 0.07 13.2 0.1 0.14 12.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1500) DUF3237 PF11578.8 NODE_23777_length_871_cov_76.138756_g18474_i0forward_frame_1 - 0.088 12.7 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) zf-RING_2 PF13639.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 1.8e-10 41.0 2.2 3.7e-10 40.0 2.2 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 5.2e-07 29.3 4.6 1.4e-06 27.9 4.6 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 6.7e-07 29.1 1.6 1.4e-06 28.0 1.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 1.4e-06 28.5 3.9 5.2e-06 26.7 3.9 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 1.5e-06 27.9 1.1 3.9e-06 26.6 1.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 2e-06 27.5 1.4 4.5e-06 26.4 1.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 5.7e-06 26.3 2.8 1.2e-05 25.2 2.8 1.6 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 6e-06 26.0 2.1 1.3e-05 24.9 2.1 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 4.8e-05 23.2 2.1 0.00011 22.0 2.1 1.7 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 0.0097 15.5 2.5 0.0097 15.5 2.5 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 0.068 13.2 0.7 0.068 13.2 0.7 2.0 3 1 0 3 3 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger DUF4834 PF16118.5 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 0.28 12.2 0.1 0.28 12.2 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) DUF4577 PF15145.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 3.1 7.9 6.3 0.31 11.1 0.4 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4577) Rhomboid PF01694.22 NODE_23713_length_873_cov_1.942721_g18419_i0reverse_frame_1 - 3.5e-06 27.1 1.6 3.5e-06 27.1 1.6 2.8 2 1 1 3 3 3 1 Rhomboid family DUF4042 PF13251.6 NODE_23680_length_873_cov_450.700477_g3293_i6reverse_frame_1 - 0.036 13.8 0.8 0.085 12.5 0.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) CSG2 PF16965.5 NODE_23618_length_875_cov_76.769048_g18341_i0reverse_frame_2 - 0.54 9.2 5.9 0.11 11.5 2.3 1.6 1 1 1 2 2 2 0 Ceramide synthase regulator Ank_4 PF13637.6 NODE_23574_length_876_cov_156.110583_g18301_i0reverse_frame_3 - 0.081 13.5 0.1 17 6.1 0.0 2.5 2 0 0 2 2 2 0 Ankyrin repeats (many copies) CARD PF00619.21 NODE_23574_length_876_cov_156.110583_g18301_i0reverse_frame_3 - 0.12 12.4 1.1 0.25 11.4 0.7 1.8 2 0 0 2 2 2 0 Caspase recruitment domain PhoLip_ATPase_C PF16212.5 ORF99906 - 6.1e-56 190.0 2.3 7e-56 189.8 2.3 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal CT47 PF15623.6 ORF99297 - 1.6 8.5 22.1 2.3 8.0 22.1 1.2 1 0 0 1 1 1 0 Cancer/testis gene family 47 LGT PF01790.18 ORF96385 - 6.2e-77 258.1 11.5 7.3e-77 257.9 11.5 1.0 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase DUF202 PF02656.15 ORF96385 - 0.63 10.5 9.6 2.3 8.7 2.6 3.7 3 1 0 3 3 3 0 Domain of unknown function (DUF202) DUF4191 PF13829.6 ORF96385 - 0.83 9.0 4.7 1.9 7.7 0.1 2.8 4 0 0 4 4 4 0 Domain of unknown function (DUF4191) Tetraspanin PF00335.20 ORF96385 - 0.9 9.2 3.0 0.65 9.7 0.6 1.9 2 0 0 2 2 2 0 Tetraspanin family TF_AP-2 PF03299.14 ORF93988 - 0.026 14.5 2.6 0.049 13.6 2.6 1.4 1 0 0 1 1 1 0 Transcription factor AP-2 BCDHK_Adom3 PF10436.9 ORF93988 - 6.2 6.6 8.5 10 5.9 8.5 1.5 1 1 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase OAS1_C PF10421.9 ORF93377 - 0.00038 20.0 0.0 0.00056 19.5 0.0 1.2 1 0 0 1 1 1 1 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus TTL PF03133.15 ORF91064 - 1.5e-17 63.6 0.0 5.5e-08 32.3 0.0 2.1 1 1 1 2 2 2 2 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF91064 - 2.4e-06 27.0 0.0 3.4e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp adh_short PF00106.25 ORF91053 - 7.5e-49 165.8 0.0 9.2e-49 165.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF91053 - 1.4e-31 109.9 0.0 1.7e-31 109.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF91053 - 1.6e-11 44.4 0.0 2.3e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 KR domain Shikimate_DH PF01488.20 ORF91053 - 0.0017 18.4 0.0 0.0034 17.5 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase THF_DHG_CYH_C PF02882.19 ORF91053 - 0.0055 16.0 0.0 0.009 15.3 0.0 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F420_oxidored PF03807.17 ORF91053 - 0.028 15.0 0.0 0.052 14.1 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DUF1776 PF08643.10 ORF91053 - 0.028 13.8 0.0 7.3 5.9 0.0 2.2 2 0 0 2 2 2 0 Fungal family of unknown function (DUF1776) ApbA PF02558.16 ORF91053 - 0.028 14.0 0.0 0.045 13.4 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NADHdh PF00146.21 ORF91053 - 0.066 12.5 1.7 0.096 12.0 1.7 1.2 1 0 0 1 1 1 0 NADH dehydrogenase NAD_binding_7 PF13241.6 ORF91053 - 0.075 13.5 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 ORF91053 - 0.077 13.3 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 ORF91053 - 0.11 12.4 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding TrkA_N PF02254.18 ORF91053 - 0.18 12.0 0.0 0.32 11.3 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain CYYR1 PF10873.8 ORF87244 - 0.014 15.9 2.8 0.014 15.9 2.8 2.7 2 1 1 3 3 3 0 Cysteine and tyrosine-rich protein 1 Amnionless PF14828.6 ORF87244 - 0.056 12.3 0.2 0.063 12.1 0.2 1.1 1 0 0 1 1 1 0 Amnionless VSP PF03302.13 ORF87244 - 0.11 11.3 1.8 0.14 10.9 1.8 1.2 1 0 0 1 1 1 0 Giardia variant-specific surface protein TMEM154 PF15102.6 ORF87244 - 0.44 10.5 2.6 0.43 10.5 0.1 2.0 1 1 1 2 2 2 0 TMEM154 protein family Stevor PF17410.2 ORF87244 - 1.3 8.5 4.0 1.7 8.1 4.0 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Glyco_hydro_38C PF07748.13 ORF81689 - 5.4e-21 75.7 0.0 1e-20 74.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain SieB PF14163.6 ORF75749 - 1.4 8.4 4.2 0.25 10.8 0.5 1.7 2 0 0 2 2 2 0 Super-infection exclusion protein B DUF2817 PF10994.8 ORF74246 - 9.4e-37 127.2 0.0 1.8e-28 100.0 0.0 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF2817) adh_short PF00106.25 ORF73953 - 7.5e-49 165.8 0.0 9.2e-49 165.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF73953 - 1.4e-31 109.9 0.0 1.7e-31 109.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF73953 - 1.7e-11 44.4 0.0 2.3e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 KR domain Shikimate_DH PF01488.20 ORF73953 - 0.0014 18.7 0.0 0.0028 17.7 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase THF_DHG_CYH_C PF02882.19 ORF73953 - 0.0041 16.5 0.0 0.0067 15.8 0.0 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F420_oxidored PF03807.17 ORF73953 - 0.027 15.0 0.0 0.052 14.1 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DUF1776 PF08643.10 ORF73953 - 0.028 13.8 0.0 7.1 5.9 0.0 2.2 2 0 0 2 2 2 0 Fungal family of unknown function (DUF1776) ApbA PF02558.16 ORF73953 - 0.028 14.0 0.0 0.048 13.3 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 ORF73953 - 0.033 14.6 0.0 0.064 13.7 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 ORF73953 - 0.076 13.3 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 ORF73953 - 0.11 12.4 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding TrkA_N PF02254.18 ORF73953 - 0.18 12.0 0.0 0.32 11.3 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Bgal_small_N PF02929.17 ORF71552 - 2.5e-62 210.7 0.0 2.8e-62 210.5 0.0 1.0 1 0 0 1 1 1 1 Beta galactosidase small chain ADP_ribosyl_GH PF03747.14 ORF7152 - 3.1e-33 115.7 0.1 3.8e-33 115.5 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Tmemb_40 PF10160.9 ORF70985 - 0.012 15.1 0.0 0.017 14.6 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein Acyltransferase PF01553.21 ORF6487 - 7.1e-14 51.6 0.1 1.1e-13 50.9 0.1 1.2 1 0 0 1 1 1 1 Acyltransferase Ion_trans PF00520.31 ORF61779 - 1.2e-11 44.3 2.3 1.9e-11 43.7 2.3 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF61779 - 1.6e-09 36.9 2.7 0.00013 21.6 0.1 3.7 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF61779 - 9.5e-09 35.6 1.7 0.0015 18.9 0.1 3.0 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF61779 - 4.9e-07 28.8 3.9 0.0009 18.6 0.1 3.5 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF61779 - 6.2e-06 26.0 6.0 0.00028 20.7 5.7 3.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF61779 - 1.8e-05 24.0 2.0 0.0026 17.2 0.1 3.2 3 0 0 3 3 3 1 EF hand EF-hand_10 PF14788.6 ORF61779 - 0.0032 17.3 0.1 0.098 12.5 0.5 2.3 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF61779 - 0.032 14.2 0.4 0.062 13.3 0.4 1.4 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand CT47 PF15623.6 ORF61376 - 1.6 8.5 22.1 2.3 8.0 22.1 1.2 1 0 0 1 1 1 0 Cancer/testis gene family 47 Fer4_13 PF13370.6 ORF60509 - 1.5e-06 28.6 1.9 2.8e-06 27.8 0.6 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 ORF60509 - 1.7e-05 25.4 2.5 1.7e-05 25.4 2.5 2.9 2 2 0 2 2 2 1 4Fe-4S single cluster domain Fer4 PF00037.27 ORF60509 - 0.0017 18.1 4.5 0.23 11.3 1.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain EF-hand_7 PF13499.6 ORF60509 - 0.017 15.6 0.2 0.085 13.3 0.3 2.2 2 1 0 2 2 2 0 EF-hand domain pair SMP PF04927.12 ORF60509 - 0.11 12.9 1.4 0.19 12.2 0.6 1.8 1 1 0 1 1 1 0 Seed maturation protein Fer4_6 PF12837.7 ORF60509 - 0.14 12.2 3.9 0.8 9.9 1.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain EF-hand_5 PF13202.6 ORF60509 - 0.21 11.2 0.8 0.41 10.2 0.1 1.9 2 0 0 2 2 2 0 EF hand ABC_tran PF00005.27 ORF57490 - 3.7e-14 53.4 0.0 7.3e-14 52.4 0.0 1.5 1 0 0 1 1 1 1 ABC transporter CBS PF00571.28 ORF57490 - 2.9e-08 34.0 0.1 8.4e-06 26.1 0.0 2.9 3 0 0 3 3 3 1 CBS domain AAA_21 PF13304.6 ORF57490 - 0.011 15.5 0.0 0.019 14.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 ORF57490 - 0.049 13.6 0.1 0.083 12.8 0.1 1.4 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter ABC_ATPase PF09818.9 ORF57490 - 0.055 12.2 0.0 0.079 11.7 0.0 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class SbcCD_C PF13558.6 ORF57490 - 0.097 12.9 0.0 0.24 11.6 0.0 1.7 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ubiquitin PF00240.23 ORF5724 - 0.0034 17.1 0.0 0.032 14.0 0.0 2.2 2 0 0 2 2 2 1 Ubiquitin family EF-hand_7 PF13499.6 ORF5724 - 0.0051 17.2 0.0 0.009 16.4 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF5724 - 0.03 14.3 0.0 0.21 11.6 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 ORF5724 - 0.15 11.6 0.0 0.36 10.5 0.0 1.7 2 0 0 2 2 2 0 EF hand NAD_binding_2 PF03446.15 ORF56087 - 3e-42 144.5 1.1 4e-42 144.1 1.1 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF56087 - 6.7e-32 110.3 0.1 2.3e-31 108.5 0.0 1.9 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCO3_cotransp PF00955.21 ORF53972 - 6e-64 216.7 0.1 7e-64 216.5 0.1 1.1 1 0 0 1 1 1 1 HCO3- transporter family Aa_trans PF01490.18 ORF52205 - 7.1e-18 64.5 2.7 1.1e-17 63.8 2.7 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF997 PF06196.12 ORF52205 - 0.073 13.1 5.5 2.9 8.0 1.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF997) Melibiase_2 PF16499.5 ORF38437 - 8.5e-15 54.7 0.6 1.5e-14 53.9 0.6 1.4 1 1 0 1 1 1 1 Alpha galactosidase A Melibiase_C PF17801.1 ORF38437 - 2.7e-08 33.8 0.1 8.7e-08 32.1 0.0 1.9 3 0 0 3 3 3 1 Alpha galactosidase C-terminal beta sandwich domain AFG1_ATPase PF03969.16 ORF38279 - 5.5e-35 120.9 0.1 7.2e-35 120.5 0.1 1.1 1 0 0 1 1 1 1 AFG1-like ATPase EF-hand_1 PF00036.32 ORF38279 - 6.9e-10 37.8 4.8 6.3e-05 22.2 1.3 2.7 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF38279 - 1.1e-09 38.6 7.3 2.6e-09 37.4 6.8 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF38279 - 1.4e-09 37.1 2.5 0.00036 20.2 1.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF38279 - 1.1e-07 31.0 1.3 0.00084 18.7 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF38279 - 0.00014 21.6 4.1 0.034 14.0 1.3 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF38279 - 0.007 16.3 2.2 0.092 12.7 0.5 2.3 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand ER_lumen_recept PF00810.18 ORF38161 - 1.4e-30 107.0 1.0 1.4e-30 107.0 1.0 2.1 2 0 0 2 2 2 1 ER lumen protein retaining receptor AA_permease_2 PF13520.6 ORF38161 - 0.06 12.2 10.5 0.023 13.6 7.8 1.6 1 1 0 1 1 1 0 Amino acid permease BA14K PF07886.11 ORF38161 - 0.13 12.2 0.0 0.31 10.9 0.0 1.7 1 0 0 1 1 1 0 BA14K-like protein FH2 PF02181.23 ORF35622 - 0.0054 15.9 7.4 0.0054 15.9 7.4 2.9 1 1 2 3 3 3 1 Formin Homology 2 Domain Fib_alpha PF08702.10 ORF35622 - 0.17 12.0 21.0 0.037 14.2 9.9 3.0 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Golgin_A5 PF09787.9 ORF35622 - 1.3 8.4 41.7 0.024 14.1 21.6 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 ATG16 PF08614.11 ORF35622 - 4 7.6 46.4 4.3 7.5 13.2 3.5 1 1 1 3 3 3 0 Autophagy protein 16 (ATG16) TMPIT PF07851.13 ORF35622 - 6 6.0 20.8 0.29 10.3 5.3 2.6 1 1 1 2 2 2 0 TMPIT-like protein zf-CCCH_6 PF18585.1 ORF35622 - 6.1 6.8 9.6 0.14 12.1 0.6 3.0 3 1 0 3 3 3 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 Ion_trans PF00520.31 ORF35014 - 1.1e-19 70.7 14.1 1.4e-19 70.3 14.1 1.1 1 0 0 1 1 1 1 Ion transport protein DUF267 PF03268.14 ORF35014 - 0.04 12.8 1.2 0.059 12.2 0.0 1.8 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF267 SieB PF14163.6 ORF34642 - 1.4 8.4 4.2 0.25 10.8 0.5 1.7 2 0 0 2 2 2 0 Super-infection exclusion protein B AMPK1_CBM PF16561.5 ORF34103 - 4.6e-17 62.0 0.0 8.2e-17 61.2 0.0 1.4 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase DSPc PF00782.20 ORF34103 - 6.4e-10 39.0 0.0 8.9e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain CBM_48 PF02922.18 ORF34103 - 0.095 13.1 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) zf-CCHH PF10283.9 ORF33407 - 1e-12 47.8 2.8 1.5e-12 47.2 2.8 1.3 1 0 0 1 1 1 1 PBZ domain UBA PF00627.31 ORF33407 - 0.0016 18.3 0.0 0.0039 17.1 0.0 1.7 1 0 0 1 1 1 1 UBA/TS-N domain DLIC PF05783.11 ORF33407 - 0.075 11.8 0.9 0.095 11.5 0.9 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) Fer4_19 PF06902.11 ORF33407 - 0.15 12.1 0.0 0.29 11.3 0.0 1.4 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster EamA PF00892.20 ORF32135 - 0.0012 19.0 27.3 0.076 13.2 12.7 4.0 2 2 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 ORF32135 - 0.0036 16.6 4.3 0.0048 16.1 4.3 1.2 1 0 0 1 1 1 1 UAA transporter family TPT PF03151.16 ORF32135 - 0.012 15.0 11.6 0.12 11.7 11.7 2.4 1 1 0 1 1 1 0 Triose-phosphate Transporter family COX14 PF14880.6 ORF32135 - 0.24 11.3 0.4 3.1 7.7 0.0 2.6 2 0 0 2 2 2 0 Cytochrome oxidase c assembly CYYR1 PF10873.8 ORF30097 - 0.017 15.6 2.9 0.017 15.6 2.9 2.3 1 1 2 3 3 3 0 Cysteine and tyrosine-rich protein 1 Amnionless PF14828.6 ORF30097 - 0.054 12.3 0.3 0.061 12.2 0.3 1.1 1 0 0 1 1 1 0 Amnionless VSP PF03302.13 ORF30097 - 0.11 11.3 1.8 0.14 10.9 1.8 1.2 1 0 0 1 1 1 0 Giardia variant-specific surface protein TMEM154 PF15102.6 ORF30097 - 0.42 10.5 2.6 0.43 10.5 0.1 2.1 1 1 1 2 2 2 0 TMEM154 protein family Stevor PF17410.2 ORF30097 - 1.3 8.6 4.0 1.7 8.1 4.0 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Sulfate_transp PF00916.20 ORF29045 - 6.8e-33 113.9 5.6 8.8e-33 113.6 5.6 1.1 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 ORF29045 - 7.2e-06 25.6 0.0 1.7e-05 24.5 0.0 1.6 2 0 0 2 2 2 1 STAS domain MFS_MOT1 PF16983.5 ORF29045 - 0.42 11.0 11.4 0.57 10.6 5.1 2.5 1 1 1 2 2 2 0 Molybdate transporter of MFS superfamily PDZ PF00595.24 ORF28976 - 0.0035 17.6 0.0 0.007 16.7 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF28976 - 0.0071 16.2 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 PDZ domain T3SS_basalb_I PF17001.5 ORF28976 - 0.021 15.4 0.1 0.058 14.0 0.1 1.7 1 0 0 1 1 1 0 Type III secretion basal body protein I, YscI, HrpB, PscI HTH_Tnp_1 PF01527.20 ORF28976 - 0.046 14.0 2.0 14 6.1 0.2 3.1 2 0 0 2 2 2 0 Transposase Amino_oxidase PF01593.24 ORF24420 - 4.6e-15 55.8 0.0 7.7e-14 51.8 0.0 2.1 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Pyr_redox_2 PF07992.14 ORF24420 - 0.00014 21.2 0.1 0.0096 15.2 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 ORF24420 - 0.00038 19.6 1.4 0.00067 18.8 0.4 1.8 2 0 0 2 2 2 1 Lycopene cyclase protein Thi4 PF01946.17 ORF24420 - 0.0004 19.7 0.0 0.00055 19.3 0.0 1.2 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 ORF24420 - 0.00097 18.3 0.6 0.048 12.7 0.1 2.1 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.19 ORF24420 - 0.0018 17.6 0.2 0.49 9.6 0.0 2.1 2 0 0 2 2 2 2 FAD binding domain NAD_binding_9 PF13454.6 ORF24420 - 0.0019 18.2 1.1 0.15 12.1 0.2 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF24420 - 0.0068 15.2 0.4 0.12 11.1 0.4 2.0 2 0 0 2 2 2 1 HI0933-like protein DAO PF01266.24 ORF24420 - 0.01 15.5 11.2 0.27 10.7 11.2 2.3 1 1 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF24420 - 0.027 14.7 1.1 0.16 12.2 1.1 2.2 1 1 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DUF442 PF04273.13 ORF24420 - 0.035 14.2 0.1 0.067 13.3 0.1 1.4 1 0 0 1 1 1 0 Putative phosphatase (DUF442) Pyr_redox PF00070.27 ORF24420 - 0.079 13.5 0.1 19 5.9 0.1 2.7 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 ORF24420 - 0.084 12.2 0.1 0.14 11.4 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DUF840 PF05801.11 ORF24336 - 0.0096 16.0 0.1 0.016 15.2 0.1 1.3 1 0 0 1 1 1 1 Lagovirus protein of unknown function (DUF840) TAP42 PF04177.12 ORF22892 - 5.7e-52 176.8 1.0 6.5e-52 176.6 1.0 1.0 1 0 0 1 1 1 1 TAP42-like family ADP_ribosyl_GH PF03747.14 ORF22892 - 0.087 12.5 0.2 0.087 12.5 0.2 1.8 2 0 0 2 2 2 0 ADP-ribosylglycohydrolase BET PF17035.5 ORF21732 - 1.1e-10 41.5 0.2 1.1e-09 38.4 0.0 2.5 2 0 0 2 2 2 1 Bromodomain extra-terminal - transcription regulation PET PF06297.14 ORF21732 - 0.018 15.3 0.8 0.16 12.3 0.1 2.7 3 0 0 3 3 3 0 PET Domain DUF4919 PF16266.5 ORF21732 - 0.042 13.8 2.0 0.078 12.9 0.6 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4919) KMP11 PF03037.16 ORF21732 - 0.81 10.5 5.0 9.4 7.1 1.6 2.7 2 0 0 2 2 2 0 Kinetoplastid membrane protein 11 YqzH PF14164.6 ORF21732 - 1.6 8.9 5.4 6.3 6.9 0.3 3.6 3 1 1 4 4 4 0 YqzH-like protein O-antigen_lig PF13425.6 ORF21732 - 8.5 5.0 7.8 20 3.8 7.8 1.6 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Con-6 PF10346.9 ORF1577 - 0.043 13.8 1.0 0.17 11.9 1.0 2.0 1 0 0 1 1 1 0 Conidiation protein 6 ISP3_C PF18045.1 ORF13966 - 7.4e-10 38.7 0.8 5e-06 26.3 0.5 2.3 2 0 0 2 2 2 2 ISP3 C-terminal ISP1_C PF18161.1 ORF13966 - 2.4e-06 27.5 0.2 0.00042 20.3 0.2 2.4 2 0 0 2 2 2 2 ISP1 C-terminal PX PF00787.24 ORF138 - 3.4e-09 36.7 1.7 4.5e-09 36.3 0.3 1.9 2 0 0 2 2 2 1 PX domain SLC12 PF03522.15 ORF138 - 0.025 13.6 1.8 0.033 13.2 1.8 1.2 1 0 0 1 1 1 0 Solute carrier family 12 HCO3_cotransp PF00955.21 ORF11560 - 6e-64 216.7 0.1 7e-64 216.5 0.1 1.1 1 0 0 1 1 1 1 HCO3- transporter family FidL_like PF15941.5 ORF110096 - 0.19 12.2 0.3 0.19 12.2 0.3 3.5 4 0 0 4 4 4 0 FidL-like putative membrane protein OATP PF03137.20 ORF110096 - 0.25 9.6 0.5 0.3 9.3 0.5 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family TetR_C_8 PF14278.6 ORF110096 - 7.8 6.7 14.2 7.5 6.7 1.7 3.9 1 1 2 4 4 4 0 Transcriptional regulator C-terminal region MIP PF00230.20 ORF109958 - 9.7e-29 100.7 11.8 1.4e-28 100.2 11.8 1.1 1 0 0 1 1 1 1 Major intrinsic protein Glyco_hydro_38C PF07748.13 ORF103561 - 6e-22 78.8 0.0 1.1e-21 77.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain DUF5488 PF17590.2 ORF103561 - 0.18 11.5 0.4 0.54 10.0 0.0 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5488) TetR_C_21 PF17926.1 ORF102108 - 0.087 13.0 0.1 0.33 11.1 0.1 2.0 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain YdjM PF04307.14 NODE_23892_length_868_cov_2.719088_g18568_i0reverse_frame_1 - 2.4e-33 114.9 7.2 3.4e-33 114.4 7.2 1.1 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF2227 PF09988.9 NODE_23892_length_868_cov_2.719088_g18568_i0reverse_frame_1 - 0.068 13.0 2.5 1.4 8.8 0.4 2.4 1 1 1 2 2 2 0 Uncharacterized metal-binding protein (DUF2227) AcetylCoA_hyd_C PF13336.6 NODE_23886_length_868_cov_83.286915_g18563_i0reverse_frame_1 - 0.069 13.1 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase C-terminal domain HTH_AraC PF00165.23 NODE_23781_length_871_cov_3.632775_g18478_i0reverse_frame_2 - 1.1e-07 31.7 0.1 2.2e-06 27.6 0.0 2.5 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 NODE_23781_length_871_cov_3.632775_g18478_i0reverse_frame_2 - 0.00013 22.1 0.0 0.00027 21.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2968 PF11180.8 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_2 - 0.084 12.5 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Arm PF00514.23 ORF96671 - 1.7e-07 31.0 3.2 0.048 13.7 0.1 4.8 4 2 0 4 4 4 2 Armadillo/beta-catenin-like repeat NUC130_3NT PF08158.12 ORF96671 - 0.0091 16.3 0.1 0.026 14.9 0.1 1.8 1 0 0 1 1 1 1 NUC130/3NT domain HEAT_EZ PF13513.6 ORF96671 - 0.065 13.8 16.2 0.31 11.6 0.9 3.9 3 2 0 4 4 4 0 HEAT-like repeat KAP PF05804.12 ORF96671 - 0.16 10.1 0.0 0.21 9.7 0.0 1.2 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) Viral_DNA_Zn_bi PF03728.13 ORF95319 - 0.08 13.5 1.4 0.15 12.7 0.2 2.0 2 0 0 2 2 2 0 Viral DNA-binding protein, zinc binding domain DSHCT PF08148.12 ORF94418 - 0.00033 20.4 3.6 7.7 6.2 0.2 4.6 1 1 3 4 4 4 3 DSHCT (NUC185) domain HXXEE PF13787.6 ORF94418 - 0.00046 21.0 4.2 13 6.6 0.1 4.4 5 0 0 5 5 5 3 Protein of unknown function with HXXEE motif Cyclin_C PF02984.19 ORF94418 - 0.0022 18.1 7.2 1.5 9.0 0.2 3.7 1 1 2 4 4 4 2 Cyclin, C-terminal domain Integrase_H2C2 PF17921.1 ORF94418 - 0.08 13.1 0.2 1e+02 3.1 0.0 4.3 5 0 0 5 5 5 0 Integrase zinc binding domain NdhN PF11909.8 ORF94418 - 0.14 11.9 0.2 19 4.9 0.0 2.2 2 0 0 2 2 2 0 NADH-quinone oxidoreductase cyanobacterial subunit N Tom6 PF17112.5 ORF94418 - 4.7 6.8 17.4 29 4.3 0.1 5.7 7 0 0 7 7 7 0 Mitochondrial import receptor subunit Tom6, fungal hnRNP_Q_AcD PF18360.1 ORF84723 - 8.3e-06 25.7 0.1 0.00082 19.3 0.3 2.4 2 0 0 2 2 2 1 Heterogeneous nuclear ribonucleoprotein Q acidic domain YusW PF14039.6 ORF84723 - 0.16 12.5 1.9 2.9 8.5 0.5 2.5 2 0 0 2 2 2 0 YusW-like protein Bap31_Bap29_C PF18035.1 ORF84723 - 0.3 11.1 3.7 0.14 12.2 0.7 2.0 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain V_ATPase_I PF01496.19 ORF84723 - 1.4 6.8 7.1 0.25 9.2 1.7 1.9 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family FRB_dom PF08771.11 ORF83284 - 0.82 10.1 6.3 0.18 12.2 1.3 2.3 2 1 0 2 2 2 0 FKBP12-rapamycin binding domain DUF2608 PF11019.8 ORF79701 - 0.0047 16.5 0.0 0.24 10.8 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2608) Acid_PPase PF12689.7 ORF79701 - 0.016 15.1 0.0 0.47 10.3 0.0 2.1 2 0 0 2 2 2 0 Acid Phosphatase PP2C PF00481.21 ORF79676 - 1.4e-41 142.9 0.0 1.9e-41 142.4 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF79676 - 0.0098 15.8 0.0 1.2 9.1 0.0 2.1 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) PP2C_2 PF13672.6 ORF79676 - 0.014 15.0 0.0 0.035 13.7 0.0 1.6 1 1 0 1 1 1 0 Protein phosphatase 2C HSP33 PF01430.19 ORF78973 - 2.6e-49 168.0 0.0 3.2e-49 167.8 0.0 1.1 1 0 0 1 1 1 1 Hsp33 protein GRASP55_65 PF04495.14 ORF77883 - 2.8e-30 105.5 0.1 5.6e-30 104.5 0.0 1.6 2 0 0 2 2 2 1 GRASP55/65 PDZ-like domain LRR_8 PF13855.6 ORF77883 - 0.034 13.9 0.2 0.065 13.0 0.2 1.4 1 0 0 1 1 1 0 Leucine rich repeat YlqD PF11068.8 ORF77883 - 6.5 7.1 16.2 3 8.2 13.5 1.8 3 0 0 3 3 3 0 YlqD protein VWA PF00092.28 ORF74365 - 0.00019 21.7 0.0 0.0003 21.1 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF74365 - 0.0039 17.8 0.0 0.01 16.5 0.0 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 ORF74365 - 0.015 14.7 0.1 0.056 12.8 0.0 2.1 2 1 1 3 3 3 0 VWA domain containing CoxE-like protein VWA PF00092.28 ORF73740 - 0.00019 21.7 0.0 0.0003 21.1 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF73740 - 0.0039 17.8 0.0 0.01 16.5 0.0 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 ORF73740 - 0.015 14.7 0.1 0.056 12.8 0.0 2.1 2 1 1 3 3 3 0 VWA domain containing CoxE-like protein ABC_tran PF00005.27 ORF7248 - 6.5e-28 97.9 0.0 1.5e-27 96.7 0.0 1.6 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF7248 - 1.2e-06 28.2 0.5 0.00018 21.0 0.1 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF7248 - 0.0012 19.0 0.2 0.0037 17.3 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF7248 - 0.0046 17.1 0.2 0.012 15.7 0.0 1.7 2 0 0 2 2 2 1 Immunity protein 58 AAA_29 PF13555.6 ORF7248 - 0.011 15.5 0.0 0.027 14.2 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 ORF7248 - 0.025 15.1 0.1 0.059 13.9 0.0 1.8 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF7248 - 0.026 15.0 0.2 0.071 13.6 0.2 1.7 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 ORF7248 - 0.027 14.4 0.4 0.51 10.2 0.0 2.7 3 0 0 3 3 3 0 NTPase DUF87 PF01935.17 ORF7248 - 0.027 14.6 0.0 0.051 13.7 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain ATP_bind_1 PF03029.17 ORF7248 - 0.051 13.3 0.0 0.84 9.4 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA PF00004.29 ORF7248 - 0.053 13.9 0.0 0.58 10.6 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF7248 - 0.058 13.4 0.2 17 5.4 0.0 2.8 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 ORF7248 - 0.067 13.6 1.4 1.8 9.0 0.0 2.8 3 0 0 3 3 3 0 RNA helicase CbiA PF01656.23 ORF7248 - 0.078 13.0 0.0 0.14 12.2 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_24 PF13479.6 ORF7248 - 0.099 12.4 0.2 0.2 11.3 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF7248 - 0.15 11.6 0.0 0.49 9.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 ORF7248 - 0.31 11.3 1.1 1.8 8.8 1.1 2.1 1 1 0 1 1 1 0 AAA domain RCC1 PF00415.18 ORF71520 - 1.1e-52 176.4 5.5 4.1e-10 40.1 0.1 5.2 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF71520 - 6e-37 124.7 20.5 1.6e-10 40.5 0.3 6.2 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat VIR_N PF15912.5 ORF70437 - 0.15 11.7 2.1 0.22 11.1 2.1 1.2 1 0 0 1 1 1 0 Virilizer, N-terminal COesterase PF00135.28 ORF69848 - 8.9e-25 87.5 0.0 9.7e-25 87.4 0.0 1.0 1 0 0 1 1 1 1 Carboxylesterase family Pex19 PF04614.12 ORF69555 - 1.6e-27 96.9 18.1 3.7e-27 95.7 18.1 1.6 1 1 0 1 1 1 1 Pex19 protein family FliG_N PF14842.6 ORF69555 - 0.00048 20.6 3.2 2.1 8.9 0.0 3.7 3 1 1 4 4 4 1 FliG N-terminal domain PSD5 PF07637.11 ORF69555 - 0.023 15.0 0.5 0.2 12.0 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1595) DUF3597 PF12200.8 ORF69555 - 0.035 14.7 6.9 0.44 11.1 2.8 2.9 1 1 1 3 3 3 0 Domain of unknown function (DUF3597) Abi_C PF14355.6 ORF69555 - 0.044 13.9 0.0 3.5 7.8 0.0 2.8 2 0 0 2 2 2 0 Abortive infection C-terminus DUF3510 PF12022.8 ORF69555 - 0.045 14.1 0.5 0.65 10.4 0.0 2.7 2 1 0 3 3 3 0 Domain of unknown function (DUF3510) Ribosomal_60s PF00428.19 ORF69555 - 0.069 13.7 10.2 0.11 13.0 4.8 2.9 2 1 0 2 2 2 0 60s Acidic ribosomal protein DUF3802 PF12290.8 ORF69555 - 0.13 12.8 0.4 0.62 10.6 0.0 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF3802) Styelin PF17562.2 ORF69555 - 0.35 11.3 3.0 20 5.6 0.0 3.6 3 0 0 3 3 3 0 Styelin DUF2057 PF09829.9 ORF69555 - 0.4 10.8 6.7 0.088 13.0 2.8 1.8 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2057) BMFP PF04380.13 ORF69555 - 2.7 8.6 6.3 5.7 7.5 0.1 4.2 4 2 0 5 5 5 0 Membrane fusogenic activity RCC1_2 PF13540.6 ORF68737 - 1.1e-53 178.0 47.3 3.4e-10 39.4 3.0 7.1 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF68737 - 4.3e-09 36.8 53.7 0.058 14.0 0.3 11.7 8 4 0 8 8 8 5 Regulator of chromosome condensation (RCC1) repeat Peptidase_C58 PF03543.14 ORF68737 - 0.013 15.2 0.5 18 4.9 0.0 4.2 3 2 3 6 6 6 0 Yersinia/Haemophilus virulence surface antigen DUF1786 PF08735.10 ORF68737 - 0.3 10.3 2.1 52 3.0 0.0 4.0 4 1 0 5 5 5 0 Putative pyruvate format-lyase activating enzyme (DUF1786) Kelch_6 PF13964.6 ORF68737 - 0.72 10.2 7.3 89 3.6 0.1 4.8 5 0 0 5 5 5 0 Kelch motif Kelch_4 PF13418.6 ORF68737 - 7.7 6.6 12.5 13 5.9 0.5 4.5 5 0 0 5 5 5 0 Galactose oxidase, central domain hnRNP_Q_AcD PF18360.1 ORF66851 - 8.3e-06 25.7 0.1 0.00082 19.3 0.3 2.4 2 0 0 2 2 2 1 Heterogeneous nuclear ribonucleoprotein Q acidic domain YusW PF14039.6 ORF66851 - 0.16 12.5 1.9 2.9 8.5 0.5 2.5 2 0 0 2 2 2 0 YusW-like protein Bap31_Bap29_C PF18035.1 ORF66851 - 0.3 11.1 3.7 0.14 12.2 0.7 2.0 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain V_ATPase_I PF01496.19 ORF66851 - 1.4 6.8 7.1 0.25 9.2 1.7 1.9 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family MCM_N PF14551.6 ORF66535 - 1.1 9.9 6.6 1.1 9.9 4.7 2.1 2 1 0 2 2 2 0 MCM N-terminal domain DUF1275 PF06912.11 ORF64702 - 1.2e-19 71.1 6.3 1.5e-19 70.7 6.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) DHR10 PF18595.1 ORF64702 - 0.5 10.4 2.1 2.1 8.5 0.6 2.0 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain TcpQ PF10671.9 ORF6295 - 0.018 15.1 0.6 0.039 14.1 0.1 1.8 2 0 0 2 2 2 0 Toxin co-regulated pilus biosynthesis protein Q Glyco_hydro_31 PF01055.26 ORF55998 - 9e-59 199.8 0.1 1.2e-58 199.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF55998 - 2.4e-07 30.9 0.0 4.4e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Acetyltransf_8 PF13523.6 ORF55998 - 0.057 13.1 0.7 0.21 11.3 0.4 2.0 3 0 0 3 3 3 0 Acetyltransferase (GNAT) domain Virul_fac_BrkB PF03631.15 ORF53543 - 5.1e-57 193.4 24.7 6e-57 193.2 24.7 1.0 1 0 0 1 1 1 1 Virulence factor BrkB SpoIIIAC PF06686.11 ORF53543 - 2.3 8.5 7.4 1.2 9.3 0.2 2.9 3 0 0 3 3 3 0 Stage III sporulation protein AC/AD protein family SUKH_5 PF14567.6 ORF52238 - 0.00069 19.4 0.2 0.0028 17.4 0.0 1.9 2 0 0 2 2 2 1 SMI1-KNR4 cell-wall SMI1_KNR4 PF09346.10 ORF52238 - 0.02 15.3 0.0 0.034 14.5 0.0 1.5 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) SUKH_6 PF14568.6 ORF52238 - 0.092 13.2 0.0 0.15 12.5 0.0 1.5 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall Ubiquitin_5 PF18037.1 ORF52238 - 0.12 12.8 0.3 0.22 11.9 0.3 1.5 1 0 0 1 1 1 0 Ubiquitin-like domain 3Beta_HSD PF01073.19 ORF51806 - 1.3e-15 57.2 0.0 1.6e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF51806 - 4.8e-11 42.6 0.0 1.1e-10 41.4 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF51806 - 7.3e-05 22.1 0.0 9.8e-05 21.6 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF51806 - 7.7e-05 22.0 0.2 0.00055 19.2 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF51806 - 0.0008 19.3 0.0 0.0017 18.3 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding hNIFK_binding PF12196.8 ORF51522 - 0.066 12.7 0.3 0.15 11.6 0.3 1.5 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK PH_TFIIH PF08567.11 ORF51522 - 0.16 12.3 1.6 0.29 11.5 0.2 2.0 2 0 0 2 2 2 0 TFIIH p62 subunit, N-terminal domain ER_lumen_recept PF00810.18 ORF47607 - 7.2e-38 130.7 12.1 1.1e-37 130.1 12.1 1.3 1 0 0 1 1 1 1 ER lumen protein retaining receptor Myosin_tail_1 PF01576.19 ORF42223 - 0.0041 15.0 10.6 0.0052 14.7 10.6 1.1 1 0 0 1 1 1 1 Myosin tail FlaC_arch PF05377.11 ORF42223 - 0.046 14.1 2.4 0.046 14.1 2.4 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF4472 PF14739.6 ORF42223 - 0.2 12.4 8.6 0.35 11.6 5.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4472) zf_CCCH_4 PF18345.1 ORF42223 - 0.23 11.6 3.1 0.47 10.6 3.1 1.6 1 0 0 1 1 1 0 Zinc finger domain LMBR1 PF04791.16 ORF42223 - 7.3 5.4 8.4 4.3 6.1 6.6 1.4 1 1 0 1 1 1 0 LMBR1-like membrane protein Viral_DNA_Zn_bi PF03728.13 ORF41353 - 0.08 13.5 1.4 0.15 12.7 0.2 2.0 2 0 0 2 2 2 0 Viral DNA-binding protein, zinc binding domain PseudoU_synth_2 PF00849.22 ORF37498 - 8.4e-16 58.5 0.0 3.7e-15 56.4 0.0 1.9 1 1 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 ORF37498 - 3.6e-14 52.2 2.8 5.5e-14 51.6 0.0 2.8 3 1 1 4 4 4 1 S4 domain S4_2 PF13275.6 ORF37498 - 0.00061 19.6 0.0 0.0016 18.2 0.0 1.7 1 0 0 1 1 1 1 S4 domain DUF2606 PF10794.9 ORF34988 - 0.093 12.5 0.5 0.24 11.1 0.5 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) Abhydrolase_1 PF00561.20 ORF34042 - 1.3e-15 57.8 0.0 4.6e-14 52.7 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF34042 - 1.3e-06 27.9 0.0 0.00013 21.3 0.0 2.2 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF34042 - 0.00048 20.2 0.0 0.00088 19.4 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Mem_trans PF03547.18 ORF33569 - 0.02 13.3 0.4 0.023 13.1 0.4 1.1 1 0 0 1 1 1 0 Membrane transport protein MFS_1 PF07690.16 ORF32959 - 2.6e-14 52.9 40.1 8e-09 34.9 25.5 2.8 1 1 1 2 2 2 2 Major Facilitator Superfamily HCO3_cotransp PF00955.21 ORF32807 - 6e-64 216.7 0.1 6.9e-64 216.5 0.1 1.0 1 0 0 1 1 1 1 HCO3- transporter family Asp_Arg_Hydrox PF05118.15 ORF29764 - 6.4e-20 71.6 0.1 1.3e-19 70.6 0.1 1.5 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase DUF3515 PF12028.8 ORF29764 - 0.11 12.2 0.1 0.3 10.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3515) Helicase_C PF00271.31 ORF28492 - 7e-08 32.8 0.0 1.1e-07 32.2 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain AsmA PF05170.14 ORF27984 - 3.6e-11 42.6 0.4 9e-11 41.3 0.4 1.6 1 1 0 1 1 1 1 AsmA family AsmA_2 PF13502.6 ORF27984 - 4.1e-05 23.2 1.0 0.0022 17.6 0.2 2.3 2 0 0 2 2 2 2 AsmA-like C-terminal region Topoisom_bac PF01131.20 ORF24142 - 4.9e-26 91.7 0.0 3.1e-21 75.9 0.0 2.0 2 0 0 2 2 2 2 DNA topoisomerase NTP_transferase PF00483.23 ORF23978 - 2.3e-47 161.7 0.0 2.7e-47 161.5 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 ORF23978 - 6.6e-07 29.8 0.0 8.6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 ORF23978 - 6.9e-06 25.6 0.4 1.2e-05 24.8 0.4 1.5 1 0 0 1 1 1 1 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF23978 - 0.077 12.8 0.2 0.23 11.3 0.2 1.8 1 0 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 ORF23978 - 0.13 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HATPase_c PF02518.26 ORF22887 - 3.7e-09 37.1 0.0 6.6e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCDHK_Adom3 PF10436.9 ORF22887 - 2.3e-05 24.3 0.2 3.7e-05 23.6 0.2 1.3 1 0 0 1 1 1 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase HATPase_c_3 PF13589.6 ORF22887 - 0.15 11.9 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1415 PF07209.12 ORF20083 - 1.3e-22 80.3 0.0 1.2e-16 61.0 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1415) Cation_ATPase_C PF00689.21 ORF19540 - 2.2e-47 161.1 0.1 2.9e-47 160.7 0.1 1.2 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus OppC_N PF12911.7 ORF19540 - 0.85 9.6 5.4 2.4 8.2 0.1 2.8 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C Glyco_transf_8 PF01501.20 ORF16495 - 0.00017 21.2 2.7 0.00086 18.9 0.1 2.5 2 1 0 2 2 2 1 Glycosyl transferase family 8 Ank_2 PF12796.7 ORF111118 - 2.2e-18 66.6 0.0 4.9e-09 36.7 0.0 2.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF111118 - 3.2e-13 49.6 1.7 0.00064 20.0 0.0 3.6 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF111118 - 1.8e-12 47.5 0.2 0.00022 21.7 0.0 3.6 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF111118 - 8e-11 41.9 2.0 0.0023 18.3 0.0 5.4 6 0 0 6 6 6 2 Ankyrin repeat Ank_3 PF13606.6 ORF111118 - 1.6e-09 37.2 0.1 0.13 12.9 0.0 4.7 4 1 0 4 4 4 2 Ankyrin repeat DnaJ PF00226.31 ORF111118 - 0.00019 21.5 0.1 0.0004 20.4 0.1 1.5 1 0 0 1 1 1 1 DnaJ domain 3Beta_HSD PF01073.19 ORF110542 - 1.2e-15 57.2 0.0 1.6e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF110542 - 4.9e-11 42.6 0.0 1.1e-10 41.4 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF110542 - 7.3e-05 22.1 0.0 9.8e-05 21.6 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF110542 - 7.7e-05 22.0 0.2 0.00055 19.2 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF110542 - 0.00079 19.4 0.0 0.0017 18.3 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding ACOX PF01756.19 ORF10904 - 1.2e-22 80.4 0.0 2.8e-22 79.2 0.0 1.6 1 1 1 2 2 2 2 Acyl-CoA oxidase DUF3021 PF11457.8 ORF107974 - 0.018 15.4 6.9 0.032 14.6 6.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF2776 PF10951.8 ORF107974 - 0.054 12.7 4.6 0.077 12.2 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) EOS1 PF12326.8 ORF107974 - 0.15 11.9 0.8 0.31 11.0 0.6 1.7 1 1 0 1 1 1 0 N-glycosylation protein TMEM208_SND2 PF05620.11 ORF107974 - 0.25 11.1 4.7 0.56 10.0 4.7 1.7 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 HA2 PF04408.23 ORF107974 - 0.36 11.1 2.5 0.39 11.0 0.6 1.9 1 1 1 2 2 2 0 Helicase associated domain (HA2) DUF3086 PF11285.8 ORF107974 - 0.44 9.6 4.6 0.46 9.5 2.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3086) NTP_transferase PF00483.23 ORF107524 - 1.1e-47 162.8 0.0 1.3e-47 162.5 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 ORF107524 - 6.6e-07 29.8 0.0 8.5e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 ORF107524 - 6.9e-06 25.6 0.4 1.2e-05 24.8 0.4 1.5 1 0 0 1 1 1 1 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF107524 - 0.079 12.7 0.2 0.23 11.3 0.2 1.8 1 0 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 ORF107524 - 0.13 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MORN PF02493.20 ORF105597 - 0.00027 20.6 0.2 0.00027 20.6 0.2 2.3 3 0 0 3 3 3 1 MORN repeat DUF4816 PF16086.5 ORF105597 - 0.059 13.3 1.8 0.059 13.3 1.8 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4816) SpoIISA_toxin PF14171.6 ORF105597 - 0.45 10.2 6.1 0.55 9.9 5.2 1.5 1 1 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system 3Beta_HSD PF01073.19 ORF105443 - 1.2e-15 57.2 0.0 1.6e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF105443 - 4.9e-11 42.6 0.0 1.1e-10 41.4 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF105443 - 7.3e-05 22.1 0.0 9.8e-05 21.6 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF105443 - 7.7e-05 22.0 0.2 0.00055 19.2 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF105443 - 0.00079 19.4 0.0 0.0017 18.3 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding DivIC PF04977.15 ORF105274 - 0.046 13.5 0.1 0.085 12.6 0.1 1.3 1 0 0 1 1 1 0 Septum formation initiator WD40 PF00400.32 ORF102128 - 1.4e-07 32.1 13.1 0.014 16.3 0.0 4.1 3 1 1 4 4 4 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF102128 - 0.0014 18.9 0.1 1.7 9.0 0.0 3.3 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Hira PF07569.11 ORF102128 - 0.098 12.4 0.7 4.8 6.8 0.1 2.3 2 0 0 2 2 2 0 TUP1-like enhancer of split FPL PF09758.9 ORF10188 - 0.076 13.0 0.3 0.076 13.0 0.3 2.0 2 1 0 2 2 2 0 Uncharacterised conserved protein BCL_N PF04714.13 ORF10188 - 0.38 10.9 2.3 26 5.0 0.2 2.7 1 1 1 2 2 2 0 BCL7, N-terminal conserver region AidB_N PF18158.1 NODE_23988_length_865_cov_177.725301_g18488_i1forward_frame_1 - 0.045 13.7 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain IncF PF17626.2 NODE_23988_length_865_cov_177.725301_g18488_i1forward_frame_1 - 0.07 13.5 0.3 0.13 12.6 0.3 1.5 1 0 0 1 1 1 0 Inclusion membrane protein F Flu_NS1 PF00600.19 NODE_23964_length_866_cov_2.481348_g18633_i0forward_frame_1 - 0.1 12.1 0.2 0.16 11.5 0.2 1.2 1 0 0 1 1 1 0 Influenza non-structural protein (NS1) Cu_bind_CorA PF18252.1 NODE_23963_length_866_cov_2.726835_g18632_i0forward_frame_1 - 0.11 12.2 0.1 0.2 11.2 0.1 1.5 1 0 0 1 1 1 0 Copper(I)-binding protein CorA hNIFK_binding PF12196.8 NODE_23934_length_866_cov_5185.910951_g18607_i0reverse_frame_1 - 0.005 16.3 0.1 4.2 6.9 0.0 2.4 2 0 0 2 2 2 2 FHA Ki67 binding domain of hNIFK DUF397 PF04149.12 NODE_23934_length_866_cov_5185.910951_g18607_i0reverse_frame_1 - 0.017 15.1 0.0 9.4 6.4 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF397) Chloroa_b-bind PF00504.21 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 1.4e-59 201.2 3.0 5.8e-35 121.2 0.1 3.0 3 0 0 3 3 3 3 Chlorophyll A-B binding protein BtrH_N PF14399.6 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.0013 19.0 0.0 5 7.4 0.0 3.2 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.0033 17.8 0.0 4.2 7.8 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.006 16.6 0.0 5.8 7.0 0.0 2.3 2 0 0 2 2 2 2 Hypothetical protein Yopt LAGLIDADG_3 PF14528.6 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.075 13.4 0.0 19 5.7 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Glyco_hydro_32C PF08244.12 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.082 12.9 0.0 6.8 6.7 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal TRP_2 PF08344.11 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.17 12.1 0.0 33 4.8 0.0 2.3 2 0 0 2 2 2 0 Transient receptor ion channel II SKN1 PF03935.15 NODE_23886_length_868_cov_83.286915_g18563_i0reverse_frame_3 - 0.011 14.2 0.6 0.011 14.2 0.6 1.6 2 0 0 2 2 2 0 Beta-glucan synthesis-associated protein (SKN1) PNK3P PF08645.11 NODE_23804_length_870_cov_96.541317_g18495_i0reverse_frame_3 - 0.01 15.6 0.4 0.016 14.9 0.4 1.3 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase AidB_N PF18158.1 NODE_23795_length_870_cov_218.323353_g18488_i0reverse_frame_3 - 0.045 13.7 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain IncF PF17626.2 NODE_23795_length_870_cov_218.323353_g18488_i0reverse_frame_3 - 0.072 13.5 0.3 0.13 12.6 0.3 1.4 1 0 0 1 1 1 0 Inclusion membrane protein F C1_2 PF03107.16 NODE_23795_length_870_cov_218.323353_g18488_i0forward_frame_2 - 4.9e-07 30.0 3.2 1e-06 29.0 3.2 1.5 1 0 0 1 1 1 1 C1 domain DUF3464 PF11947.8 NODE_23795_length_870_cov_218.323353_g18488_i0forward_frame_2 - 0.0068 16.2 0.5 0.0068 16.2 0.5 4.3 2 1 1 3 3 3 1 Photosynthesis affected mutant 68 2OG-FeII_Oxy PF03171.20 ORF8878 - 1.1e-07 32.2 0.0 1.8e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Mtf2_C PF14061.6 ORF86614 - 0.18 12.0 0.0 0.4 10.9 0.0 1.6 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 Guanylate_cyc PF00211.20 ORF85824 - 1.3e-05 24.9 0.0 2.6e-05 23.9 0.0 1.5 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain PIN_12 PF16289.5 ORF85824 - 0.011 16.2 0.3 0.069 13.6 0.2 2.1 2 0 0 2 2 2 0 PIN domain DUF5517 PF17639.2 ORF85824 - 0.091 13.1 1.7 0.25 11.7 0.1 2.3 3 0 0 3 3 3 0 Family of unknown function (DUF5517) Auxin_inducible PF02519.14 ORF80327 - 0.0081 16.3 0.4 7.4 6.8 0.0 2.7 2 2 0 2 2 2 2 Auxin responsive protein Mob1_phocein PF03637.17 ORF80327 - 0.26 11.3 0.0 9.9 6.1 0.0 2.1 2 0 0 2 2 2 0 Mob1/phocein family RseC_MucC PF04246.12 ORF80327 - 0.46 10.4 4.0 8.8 6.3 0.2 2.6 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Cys_rich_FGFR PF00839.17 ORF76707 - 3.3e-07 30.3 5.2 0.0013 18.8 0.4 3.0 2 1 1 3 3 3 2 Cysteine rich repeat DUF4366 PF14283.6 ORF76707 - 0.039 14.0 0.2 0.039 14.0 0.2 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4366) RskA PF10099.9 ORF76707 - 0.045 14.0 0.9 0.095 13.0 0.1 1.9 1 1 1 2 2 2 0 Anti-sigma-K factor rskA GREB1 PF15782.5 ORF76707 - 0.074 10.2 4.3 0.085 10.0 4.3 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer ALMT PF11744.8 ORF76707 - 2.3 7.0 6.9 2.5 6.8 6.9 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter AAA_11 PF13086.6 ORF76707 - 2.8 7.7 12.2 4.3 7.0 12.2 1.3 1 0 0 1 1 1 0 AAA domain Caudo_TAP PF02413.17 ORF76707 - 3.6 7.7 16.4 4.1 7.6 14.1 1.9 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK Hid1 PF12722.7 ORF76707 - 4.8 5.2 11.4 5.9 4.9 11.4 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Fer4_11 PF13247.6 ORF72714 - 6.8e-23 80.7 10.2 6.8e-23 80.7 10.2 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF72714 - 2.9e-13 50.2 19.6 1.1e-06 29.1 3.3 3.1 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF72714 - 5.5e-13 48.9 22.8 4.1e-07 30.1 7.1 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF72714 - 1.7e-10 40.8 27.2 4.7e-06 26.6 9.1 3.6 2 2 2 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.27 ORF72714 - 7.7e-10 38.2 37.5 7e-06 25.6 3.5 5.3 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_2 PF12797.7 ORF72714 - 2.1e-07 30.6 34.5 3e-05 23.8 2.9 4.6 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 ORF72714 - 2.8e-06 27.1 41.1 2.1e-05 24.4 4.2 4.8 5 1 0 5 5 4 4 4Fe-4S binding domain Fer4_16 PF13484.6 ORF72714 - 3.3e-05 24.7 28.0 0.67 10.9 2.3 4.6 2 1 3 5 5 5 5 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 ORF72714 - 0.00025 21.1 12.8 0.00025 21.1 12.8 3.8 4 1 1 5 5 5 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF72714 - 0.0033 17.8 27.6 0.018 15.4 7.7 3.7 2 2 0 2 2 2 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF72714 - 0.0037 18.1 48.0 0.1 13.6 5.7 4.7 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 ORF72714 - 0.0087 16.6 28.1 2 9.0 10.9 4.1 3 2 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF72714 - 0.014 15.9 33.3 0.056 14.0 3.7 4.5 4 1 0 4 4 4 0 4Fe-4S binding domain Fer4_15 PF13459.6 ORF72714 - 0.023 15.4 4.6 0.2 12.4 0.5 3.8 4 1 1 5 5 4 0 4Fe-4S single cluster domain DUF4850 PF16142.5 ORF72714 - 0.18 11.3 4.6 5.7 6.4 0.4 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF4850) Glyco_hydro_31 PF01055.26 ORF70733 - 6.5e-33 114.6 0.4 6.5e-33 114.6 0.4 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF70733 - 0.0012 19.0 0.2 0.0034 17.6 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) S1-P1_nuclease PF02265.16 ORF65300 - 4.6e-43 147.9 0.2 5.8e-43 147.5 0.2 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Cys_rich_FGFR PF00839.17 ORF60915 - 3.3e-07 30.3 5.2 0.0013 18.8 0.4 3.0 2 1 1 3 3 3 2 Cysteine rich repeat DUF4366 PF14283.6 ORF60915 - 0.039 14.0 0.2 0.039 14.0 0.2 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4366) RskA PF10099.9 ORF60915 - 0.045 14.0 0.9 0.095 13.0 0.1 1.9 1 1 1 2 2 2 0 Anti-sigma-K factor rskA GREB1 PF15782.5 ORF60915 - 0.074 10.2 4.3 0.085 10.0 4.3 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer ALMT PF11744.8 ORF60915 - 2.3 7.0 6.9 2.5 6.8 6.9 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter AAA_11 PF13086.6 ORF60915 - 2.8 7.7 12.2 4.3 7.0 12.2 1.3 1 0 0 1 1 1 0 AAA domain Caudo_TAP PF02413.17 ORF60915 - 3.6 7.7 16.4 4.1 7.6 14.1 1.9 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK Hid1 PF12722.7 ORF60915 - 4.8 5.2 11.4 5.9 4.9 11.4 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks55.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks55.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks55.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks55.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aldo_ket_red PF00248.21 ORF54576 - 1.8e-49 168.6 0.2 5.5e-49 166.9 0.2 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family DASH_Ask1 PF08655.10 ORF49512 - 0.0047 16.8 0.0 2.2 8.3 0.0 3.0 3 0 0 3 3 3 2 DASH complex subunit Ask1 Guanylate_cyc PF00211.20 ORF48966 - 1.3e-05 24.9 0.0 2.6e-05 23.9 0.0 1.5 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain PIN_12 PF16289.5 ORF48966 - 0.011 16.2 0.3 0.069 13.6 0.2 2.1 2 0 0 2 2 2 0 PIN domain DUF5517 PF17639.2 ORF48966 - 0.091 13.1 1.7 0.25 11.7 0.1 2.3 3 0 0 3 3 3 0 Family of unknown function (DUF5517) Pro_sub2 PF18513.1 ORF48550 - 0.037 14.2 0.6 0.037 14.2 0.6 2.7 3 0 0 3 3 3 0 Prodomain subtilisin 2 DUF4407 PF14362.6 ORF48550 - 0.072 12.4 23.4 0.1 12.0 22.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Col_cuticle_N PF01484.17 ORF48550 - 0.58 10.3 4.8 13 5.9 0.1 3.3 2 1 0 2 2 2 0 Nematode cuticle collagen N-terminal domain ApoO PF09769.9 ORF48550 - 1.8 8.5 5.1 2.6 8.0 0.9 2.7 1 1 1 2 2 2 0 Apolipoprotein O Guanylate_cyc PF00211.20 ORF47172 - 1.3e-05 24.9 0.0 2.6e-05 23.9 0.0 1.5 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain PIN_12 PF16289.5 ORF47172 - 0.011 16.2 0.3 0.069 13.6 0.2 2.1 2 0 0 2 2 2 0 PIN domain DUF5517 PF17639.2 ORF47172 - 0.091 13.1 1.7 0.25 11.7 0.1 2.3 3 0 0 3 3 3 0 Family of unknown function (DUF5517) VEG PF06257.11 ORF41943 - 1.5 8.9 7.9 0.26 11.3 1.2 2.6 2 0 0 2 2 2 0 Biofilm formation stimulator VEG Dsh_C PF12316.8 ORF41943 - 2.2 8.6 10.4 3.6 7.9 10.4 1.4 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal FTR1 PF03239.14 ORF41943 - 3.8 6.6 3.7 20 4.2 0.6 2.3 2 0 0 2 2 2 0 Iron permease FTR1 family DUF87 PF01935.17 ORF41943 - 4.9 7.2 13.7 0.026 14.6 1.6 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain MT0933_antitox PF14013.6 ORF41943 - 6.9 7.1 24.6 7.7 6.9 2.0 3.4 2 1 0 2 2 2 0 MT0933-like antitoxin protein DEAD PF00270.29 ORF40968 - 1.5e-42 145.3 0.1 1.9e-42 145.0 0.1 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase CMS1 PF14617.6 ORF40968 - 0.0034 16.8 0.0 0.007 15.7 0.0 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit VEG PF06257.11 ORF40968 - 0.073 13.1 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Biofilm formation stimulator VEG Mito_carr PF00153.27 ORF38851 - 2e-54 181.5 3.7 1.1e-22 79.8 0.0 3.0 2 1 1 3 3 3 3 Mitochondrial carrier protein Ricin_B_lectin PF00652.22 ORF34483 - 9.4e-20 71.1 6.5 1.9e-19 70.1 6.5 1.5 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF34483 - 2e-14 54.1 10.5 2.9e-08 34.3 0.5 2.4 1 1 2 3 3 3 3 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 ORF34483 - 0.00087 18.9 0.5 0.0026 17.3 0.2 1.8 1 1 1 2 2 2 1 Cytolethal distending toxin A/C domain PLA1 PF02253.15 ORF32923 - 1.4e-89 300.1 4.1 1.7e-89 299.8 4.1 1.0 1 0 0 1 1 1 1 Phospholipase A1 TPR_1 PF00515.28 ORF32564 - 2.4e-12 46.1 7.4 5.7e-06 25.9 0.0 5.3 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF32564 - 7.3e-09 35.8 6.3 2.4e-05 24.5 0.0 4.1 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF32564 - 3.7e-08 32.9 17.3 0.00017 21.4 0.2 5.5 5 1 2 7 7 7 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF32564 - 7.4e-08 32.0 3.1 0.014 15.1 0.1 4.5 4 0 0 4 4 4 2 TPR repeat TPR_16 PF13432.6 ORF32564 - 1.9e-07 31.6 10.5 0.00074 20.1 0.0 4.4 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF32564 - 0.0002 21.3 6.7 0.6 10.5 0.0 5.3 6 0 0 6 6 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF32564 - 0.00039 20.2 6.4 0.86 9.8 0.2 4.9 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF32564 - 0.0004 20.2 11.0 0.081 12.8 0.0 5.5 6 1 0 6 6 6 2 Tetratricopeptide repeat DUF3856 PF12968.7 ORF32564 - 0.0056 16.8 1.0 0.095 12.8 0.0 2.9 3 1 0 3 3 3 1 Domain of Unknown Function (DUF3856) TPR_19 PF14559.6 ORF32564 - 0.0063 17.0 7.6 0.1 13.1 0.0 3.9 3 1 0 4 4 3 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 ORF32564 - 0.007 15.8 2.5 0.96 9.0 0.1 3.2 3 0 0 3 3 3 1 SHNi-TPR TPR_17 PF13431.6 ORF32564 - 0.015 15.6 0.4 10 6.8 0.0 3.1 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF32564 - 0.029 15.0 9.9 24 5.8 0.1 6.0 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF32564 - 0.091 13.6 14.2 3.6 8.6 0.0 5.7 3 2 2 6 6 6 0 Tetratricopeptide repeat SNAP PF14938.6 ORF32564 - 2.9 7.2 7.0 2.6 7.4 0.1 2.8 2 1 0 2 2 2 0 Soluble NSF attachment protein, SNAP Ricin_B_lectin PF00652.22 ORF2362 - 9.4e-20 71.1 6.5 1.9e-19 70.1 6.5 1.5 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF2362 - 2e-14 54.1 10.5 2.9e-08 34.3 0.5 2.4 1 1 2 3 3 3 3 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 ORF2362 - 0.00087 18.9 0.5 0.0026 17.3 0.2 1.8 1 1 1 2 2 2 1 Cytolethal distending toxin A/C domain MMPL PF03176.15 ORF23467 - 0.0031 16.5 15.1 0.0031 16.5 15.1 1.4 1 1 0 1 1 1 1 MMPL family Patched PF02460.18 ORF23467 - 0.019 13.1 19.5 0.025 12.7 19.5 1.1 1 0 0 1 1 1 0 Patched family A2M PF00207.22 ORF20072 - 0.03 14.1 0.0 0.063 13.1 0.0 1.5 1 0 0 1 1 1 0 Alpha-2-macroglobulin family NAD1 PF18778.1 ORF17694 - 0.011 15.9 0.0 0.017 15.2 0.0 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 SNAD4 PF18750.1 ORF17694 - 0.017 15.2 0.1 0.032 14.4 0.1 1.4 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC2 PF18772.1 ORF17694 - 0.14 12.2 0.1 0.22 11.5 0.1 1.3 1 0 0 1 1 1 0 APOBEC2 PARP PF00644.20 ORF16571 - 3.9e-18 65.8 0.0 1.4e-16 60.7 0.0 2.2 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Aldo_ket_red PF00248.21 ORF13260 - 7.5e-49 166.5 0.1 2.2e-48 164.9 0.1 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family HTH_6 PF01418.17 ORF12232 - 2.3e-33 114.0 0.2 6.9e-33 112.5 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 ORF12232 - 3.9e-28 97.9 1.1 5.5e-28 97.4 0.2 1.7 2 0 0 2 2 2 1 SIS domain SIS_2 PF13580.6 ORF12232 - 1.6e-11 44.3 1.5 4.1e-07 30.1 0.1 2.6 1 1 1 2 2 2 2 SIS domain GyrI-like PF06445.15 ORF112545 - 6.8e-22 78.4 0.0 8.8e-22 78.1 0.0 1.1 1 0 0 1 1 1 1 GyrI-like small molecule binding domain HTH_18 PF12833.7 ORF112545 - 1.4e-19 70.1 2.4 2.2e-19 69.5 2.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF112545 - 1.1e-13 50.9 0.1 4.3e-07 29.9 0.2 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cass2 PF14526.6 ORF112545 - 3.2e-07 30.6 0.0 5.3e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Integron-associated effector binding protein Acyl-ACP_TE PF01643.17 ORF112041 - 0.084 12.1 0.0 0.48 9.7 0.0 1.9 2 0 0 2 2 2 0 Acyl-ACP thioesterase CIAPIN1 PF05093.13 ORF110230 - 2.2 8.8 5.9 0.8 10.3 1.0 2.6 1 1 1 2 2 2 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis DUF2756 PF10956.8 ORF110230 - 3.7 8.1 11.5 2.8 8.5 0.2 3.0 1 1 1 3 3 3 0 Protein of unknown function (DUF2756) Homoserine_dh PF00742.19 ORF110037 - 1.2e-31 110.0 0.0 1.6e-31 109.5 0.0 1.1 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 ORF110037 - 7e-13 49.3 0.0 1.3e-12 48.4 0.0 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain PhyH PF05721.13 ORF106104 - 9e-05 22.8 0.1 0.00017 21.9 0.1 1.4 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) SapB_1 PF05184.15 ORF106104 - 0.12 12.5 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Saposin-like type B, region 1 GAS2 PF02187.17 ORF103660 - 1.9e-07 31.1 0.0 3.7e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain DUF4200 PF13863.6 ORF103660 - 8.2e-06 26.2 9.1 1.8e-05 25.1 9.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) FerA PF08165.11 ORF103660 - 0.012 15.5 5.3 0.22 11.5 4.0 2.9 2 1 1 3 3 3 0 FerA (NUC095) domain DUF885 PF05960.11 ORF103660 - 0.019 14.6 1.6 0.025 14.3 1.6 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) DUF3802 PF12290.8 ORF103660 - 0.034 14.7 1.3 0.052 14.1 0.2 1.9 2 0 0 2 2 1 0 Protein of unknown function (DUF3802) SlyX PF04102.12 ORF103660 - 0.034 14.7 17.2 0.81 10.4 8.5 2.7 2 1 0 2 2 2 0 SlyX Spc7 PF08317.11 ORF103660 - 0.14 11.0 16.1 0.22 10.4 16.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 ORF103660 - 0.17 11.4 9.4 0.32 10.5 9.4 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4407 PF14362.6 ORF103660 - 0.22 10.8 7.8 0.35 10.2 7.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF724 PF05266.14 ORF103660 - 0.25 11.2 15.6 2.8 7.7 8.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) GAS PF13851.6 ORF103660 - 0.8 9.0 22.1 2.6 7.4 21.4 1.9 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Bacillus_HBL PF05791.11 ORF103660 - 1 9.2 11.2 1.6 8.5 11.2 1.4 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) CENP-H PF05837.12 ORF103660 - 2 8.9 15.9 3.2 8.2 13.1 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) ABC_tran_CTD PF16326.5 ORF103660 - 2.3 8.6 22.0 3.4 8.0 9.7 3.3 2 1 2 4 4 3 0 ABC transporter C-terminal domain IFT20 PF14931.6 ORF103660 - 3.4 7.8 17.5 2.3 8.4 2.5 2.2 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 Cluap1 PF10234.9 ORF103660 - 3.9 6.8 14.2 5.6 6.3 14.2 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 DUF3987 PF13148.6 ORF103660 - 4.1 6.3 7.9 5.6 5.9 7.3 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3987) Mod_r PF07200.13 ORF103660 - 4.4 7.4 17.2 31 4.6 17.5 2.2 2 1 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Rsd_AlgQ PF04353.13 ORF103660 - 4.5 7.2 11.9 0.11 12.5 2.5 2.2 1 1 1 2 2 2 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ UPF0242 PF06785.11 ORF103660 - 7.9 6.5 22.7 15 5.6 22.7 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Ricin_B_lectin PF00652.22 ORF102951 - 9.4e-20 71.1 6.5 1.9e-19 70.1 6.5 1.5 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF102951 - 2e-14 54.1 10.5 2.9e-08 34.3 0.5 2.4 1 1 2 3 3 3 3 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 ORF102951 - 0.00087 18.9 0.5 0.0026 17.3 0.2 1.8 1 1 1 2 2 2 1 Cytolethal distending toxin A/C domain NAD_binding_2 PF03446.15 ORF102878 - 3.1e-37 128.2 0.4 4.9e-37 127.5 0.4 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF102878 - 5.7e-31 107.3 1.0 8.7e-31 106.7 1.0 1.3 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ApbA PF02558.16 ORF102878 - 5e-06 26.2 0.0 8.3e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 ORF102878 - 5.6e-06 26.9 0.0 1.3e-05 25.7 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 ORF102878 - 7.7e-05 22.1 0.0 0.00013 21.3 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 ORF102878 - 0.00042 20.3 0.2 0.0008 19.3 0.1 1.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF102878 - 0.00072 19.6 0.0 0.0012 18.9 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 ORF102878 - 0.0029 17.2 0.0 0.006 16.2 0.0 1.7 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_N PF01210.23 ORF102878 - 0.0037 17.3 0.1 0.012 15.6 0.1 1.9 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TrkA_N PF02254.18 ORF102878 - 0.076 13.3 0.0 0.19 12.0 0.0 1.6 1 1 0 1 1 1 0 TrkA-N domain VATC PF18716.1 NODE_24105_length_862_cov_58.345828_g17543_i1forward_frame_1 - 0.049 13.5 2.5 0.049 13.5 2.5 1.8 1 1 0 1 1 1 0 Vms1-associating treble clef domain DUF418 PF04235.12 NODE_24058_length_863_cov_268.161836_g16933_i1reverse_frame_1 - 0.0016 18.4 6.1 0.0016 18.4 6.1 2.0 1 1 0 2 2 2 1 Protein of unknown function (DUF418) Sporozoite_P67 PF05642.11 NODE_24001_length_865_cov_69.332530_g18660_i0forward_frame_2 - 0.056 11.5 4.8 0.07 11.2 4.8 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen C1_2 PF03107.16 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 4.6e-07 30.1 3.2 9.9e-07 29.0 3.2 1.5 1 0 0 1 1 1 1 C1 domain DUF3464 PF11947.8 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 0.0068 16.2 0.5 0.0068 16.2 0.5 3.4 2 1 0 2 2 2 1 Photosynthesis affected mutant 68 AAA_11 PF13086.6 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 0.58 9.9 10.6 0.14 12.0 4.6 2.1 2 0 0 2 2 2 0 AAA domain GREB1 PF15782.5 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 1.4 6.0 7.4 1.8 5.6 7.4 1.2 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer SpoIIP PF07454.11 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 4.1 6.8 16.4 1.5 8.2 8.0 2.4 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) CDC45 PF02724.14 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 5.6 5.1 20.3 0.79 7.9 11.6 2.1 2 0 0 2 2 2 0 CDC45-like protein Ndc1_Nup PF09531.10 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 6.5 5.3 17.1 9.3 4.8 17.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup NPR3 PF03666.13 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 8.3 5.1 23.7 1.6 7.4 15.3 2.2 2 0 0 2 2 2 0 Nitrogen Permease regulator of amino acid transport activity 3 Connexin PF00029.19 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 9.9 5.8 15.9 1.1 9.0 5.7 2.5 2 0 0 2 2 2 0 Connexin Molydop_binding PF01568.21 NODE_23982_length_865_cov_300.708434_g18643_i0reverse_frame_3 - 0.021 14.8 0.0 0.037 14.1 0.0 1.3 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain Homeodomain PF00046.29 NODE_23982_length_865_cov_300.708434_g18643_i0reverse_frame_2 - 2.9e-08 33.5 2.0 5.4e-08 32.6 2.0 1.5 1 0 0 1 1 1 1 Homeodomain TAP_C PF03943.13 NODE_23982_length_865_cov_300.708434_g18643_i0reverse_frame_2 - 0.13 11.9 1.6 2.4 7.8 0.1 2.6 2 0 0 2 2 2 0 TAP C-terminal domain zinc_ribbon_16 PF17034.5 NODE_23982_length_865_cov_300.708434_g18643_i0reverse_frame_2 - 0.24 11.6 3.7 0.2 11.9 0.3 2.2 1 1 1 2 2 2 0 Zinc-ribbon like family Nuc_sug_transp PF04142.15 NODE_23976_length_865_cov_542.395181_g18639_i0reverse_frame_2 - 1.8e-20 73.3 21.1 3.6e-20 72.4 21.1 1.4 1 1 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 NODE_23976_length_865_cov_542.395181_g18639_i0reverse_frame_2 - 0.21 11.8 21.6 0.32 11.2 3.2 2.3 2 1 0 2 2 2 0 EamA-like transporter family Pex24p PF06398.11 NODE_23976_length_865_cov_542.395181_g18639_i0reverse_frame_2 - 0.93 8.4 2.8 0.37 9.7 0.1 1.6 2 0 0 2 2 2 0 Integral peroxisomal membrane peroxin BmKX PF09132.10 NODE_23976_length_865_cov_542.395181_g18639_i0forward_frame_2 - 8.3 6.5 6.4 0.62 10.1 0.7 2.1 2 0 0 2 2 2 0 BmKX Tmemb_55A PF09788.9 NODE_23966_length_866_cov_1.718412_g18635_i0reverse_frame_3 - 0.047 12.8 0.2 0.07 12.2 0.2 1.2 1 0 0 1 1 1 0 Transmembrane protein 55A Dzip-like_N PF13815.6 NODE_23966_length_866_cov_1.718412_g18635_i0forward_frame_3 - 2.2 8.3 6.6 2.6 8.1 0.3 2.6 1 1 1 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal Aconitase PF00330.20 NODE_23963_length_866_cov_2.726835_g18632_i0reverse_frame_3 - 2.7e-111 372.8 0.0 3.3e-111 372.6 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Plk4_PB1 PF18190.1 NODE_23963_length_866_cov_2.726835_g18632_i0forward_frame_3 - 0.094 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 1 zf-A20 PF01754.16 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_3 - 0.0065 16.4 0.5 5 7.2 0.1 2.6 2 0 0 2 2 2 2 A20-like zinc finger Myb_DNA-binding PF00249.31 NODE_23925_length_867_cov_80.948317_g18598_i0forward_frame_2 - 0.0099 16.1 0.6 0.062 13.5 0.2 2.2 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_23925_length_867_cov_80.948317_g18598_i0forward_frame_2 - 0.02 15.1 1.1 8.7 6.7 0.2 2.9 2 0 0 2 2 2 0 Myb-like DNA-binding domain MCC-bdg_PDZ PF10506.9 ORF98678 - 0.24 11.5 5.3 0.28 11.2 1.0 3.0 2 1 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF5595 PF18077.1 ORF98678 - 0.74 9.9 6.1 0.51 10.5 2.1 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF5595) Cnd1 PF12717.7 ORF98678 - 3.8 7.5 8.6 1.3 9.0 0.8 2.3 2 0 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 Csm1_N PF18504.1 ORF98678 - 5 7.5 11.2 2.1 8.7 4.2 2.7 1 1 1 2 2 2 0 Csm1 N-terminal domain Myb_DNA-bind_3 PF12776.7 ORF98678 - 7.2 7.7 10.6 4.7 8.3 1.2 3.2 2 1 1 3 3 3 0 Myb/SANT-like DNA-binding domain CN_hydrolase PF00795.22 ORF98467 - 3.3e-54 184.0 0.1 3.7e-54 183.8 0.1 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase RabGAP-TBC PF00566.18 ORF91367 - 1.5e-10 41.1 0.1 4.3e-10 39.6 0.1 1.6 2 0 0 2 2 2 1 Rab-GTPase-TBC domain Adeno_PX PF05829.12 ORF91367 - 0.041 13.8 0.5 0.093 12.6 0.5 1.5 1 0 0 1 1 1 0 Adenovirus late L2 mu core protein (Protein X) TTL PF03133.15 ORF86389 - 3.4e-09 36.3 0.0 4.8e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF86389 - 0.00028 20.2 0.0 0.00052 19.3 0.0 1.4 2 0 0 2 2 2 1 YheC/D like ATP-grasp Ank_2 PF12796.7 ORF84258 - 2.3e-53 178.7 7.8 4.9e-16 59.1 0.0 4.1 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank PF00023.30 ORF84258 - 1.9e-35 119.7 9.8 9e-06 25.9 0.0 8.2 8 0 0 8 8 8 7 Ankyrin repeat Ank_4 PF13637.6 ORF84258 - 2.4e-35 120.4 4.5 5.7e-09 36.3 0.2 5.8 3 2 3 6 6 6 6 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF84258 - 4.6e-35 119.2 14.3 4.7e-09 36.3 0.0 7.2 2 2 5 7 7 7 7 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF84258 - 2.9e-34 113.2 1.1 4.1e-05 23.6 0.0 8.9 9 0 0 9 9 9 7 Ankyrin repeat Thioredoxin_14 PF18402.1 ORF83116 - 0.00036 20.6 0.2 0.11 12.5 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin-like domain Na_Ca_ex_C PF16494.5 ORF83116 - 0.12 12.8 0.8 0.29 11.6 0.0 2.0 2 1 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain FANCI_S1-cap PF14674.6 ORF83116 - 0.16 12.1 1.0 5 7.3 0.1 3.1 3 0 0 3 3 3 0 FANCI solenoid 1 cap Zip PF02535.22 ORF80232 - 1.7e-30 106.4 17.1 3.2e-25 89.1 4.7 2.8 1 1 2 3 3 3 3 ZIP Zinc transporter E1-E2_ATPase PF00122.20 ORF80232 - 0.89 9.0 3.2 3.8 7.0 0.7 2.5 1 1 1 2 2 2 0 E1-E2 ATPase Rab5ip PF07019.12 ORF80232 - 1.6 9.4 6.9 36 5.0 1.9 3.5 3 1 0 3 3 3 0 Rab5-interacting protein (Rab5ip) ATP-synt_I PF03899.15 ORF80232 - 6.4 7.2 10.8 8.3 6.8 2.1 2.7 2 1 0 2 2 2 0 ATP synthase I chain Pkinase PF00069.25 ORF73376 - 3.8e-20 72.4 0.1 7.7e-20 71.4 0.1 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73376 - 6.8e-09 35.4 0.1 1.3e-08 34.5 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF73376 - 0.00062 19.2 0.0 0.001 18.4 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase PF00069.25 ORF73280 - 3.3e-52 177.5 0.0 3.8e-52 177.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73280 - 1.4e-16 60.6 0.0 1.8e-16 60.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF73280 - 0.00029 20.3 0.0 0.00045 19.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF73280 - 0.0037 17.2 0.0 0.0057 16.6 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF73280 - 0.053 12.9 0.0 0.07 12.5 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF73280 - 0.057 13.0 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Annexin_like PF18411.1 ORF73280 - 0.06 13.6 0.4 0.13 12.5 0.2 1.6 2 0 0 2 2 2 0 Annexin-like domain Choline_kinase PF01633.20 ORF73280 - 0.11 12.1 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase LRR_6 PF13516.6 ORF64883 - 4 7.7 7.3 28 5.1 0.1 4.1 4 0 0 4 4 4 0 Leucine Rich repeat PARP PF00644.20 ORF56530 - 2.4e-19 69.7 0.0 4.1e-19 68.9 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DsrC PF04358.13 ORF56530 - 0.07 13.6 0.1 0.11 13.0 0.1 1.4 1 0 0 1 1 1 0 DsrC like protein Prok-RING_2 PF14445.6 ORF47137 - 9.6 6.5 14.9 31 4.8 11.5 2.7 2 0 0 2 2 2 0 Prokaryotic RING finger family 2 PEPCK_ATP PF01293.20 ORF46023 - 4.4e-83 279.5 0.0 5e-83 279.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_25 PF13481.6 ORF46023 - 0.12 12.0 0.1 0.22 11.1 0.1 1.3 1 0 0 1 1 1 0 AAA domain Reovirus_L2 PF06016.11 ORF46023 - 0.16 9.1 0.0 0.22 8.7 0.0 1.0 1 0 0 1 1 1 0 Reovirus core-spike protein lambda-2 (L2) THF_DHG_CYH_C PF02882.19 ORF45821 - 7.2e-69 230.2 0.1 1.2e-68 229.5 0.1 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 ORF45821 - 8.7e-40 135.6 0.1 1.3e-39 135.0 0.1 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AAA PF00004.29 ORF42028 - 2.9e-43 147.5 0.0 4.3e-43 146.9 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF42028 - 8.2e-11 41.5 0.3 1.6e-10 40.6 0.3 1.5 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF42028 - 2.5e-08 34.5 0.0 1.2e-05 25.8 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 ORF42028 - 6.9e-07 29.3 0.1 1.3e-05 25.2 0.1 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF42028 - 1.3e-06 28.6 0.0 2.6e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF42028 - 4.7e-06 26.4 0.0 1e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF42028 - 5.7e-05 23.4 0.1 0.0075 16.6 0.0 2.5 2 1 1 3 3 2 1 AAA domain IstB_IS21 PF01695.17 ORF42028 - 0.00018 21.3 0.0 0.00034 20.4 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein Sigma54_activat PF00158.26 ORF42028 - 0.00029 20.6 0.1 0.0011 18.7 0.1 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain RNA_helicase PF00910.22 ORF42028 - 0.001 19.4 0.0 0.0022 18.3 0.0 1.6 1 0 0 1 1 1 1 RNA helicase TIP49 PF06068.13 ORF42028 - 0.0011 18.3 0.0 0.0017 17.7 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain DUF815 PF05673.13 ORF42028 - 0.0015 17.7 0.0 0.0021 17.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_7 PF12775.7 ORF42028 - 0.0017 17.9 0.0 0.0041 16.7 0.0 1.7 1 1 0 1 1 1 1 P-loop containing dynein motor region Mg_chelatase PF01078.21 ORF42028 - 0.0025 17.2 0.0 0.0051 16.2 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 ORF42028 - 0.0027 17.7 0.0 0.0043 17.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain Parvo_NS1 PF01057.17 ORF42028 - 0.0048 16.0 0.0 0.0083 15.2 0.0 1.3 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 PhoH PF02562.16 ORF42028 - 0.0052 16.3 0.1 0.009 15.5 0.1 1.3 1 0 0 1 1 1 1 PhoH-like protein TsaE PF02367.17 ORF42028 - 0.0054 16.7 0.0 0.0092 16.0 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 ORF42028 - 0.0059 17.1 0.0 0.027 15.0 0.0 2.0 2 1 0 2 2 1 1 AAA domain AAA_24 PF13479.6 ORF42028 - 0.0091 15.7 0.1 0.019 14.7 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF42028 - 0.0096 16.1 0.0 0.017 15.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF42028 - 0.011 15.3 0.1 0.026 14.1 0.1 1.6 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF42028 - 0.014 14.8 0.1 0.025 13.9 0.1 1.6 1 1 0 1 1 1 0 KaiC AAA_3 PF07726.11 ORF42028 - 0.019 14.8 0.0 0.033 14.1 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 ORF42028 - 0.019 15.2 0.0 0.032 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF42028 - 0.027 14.2 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF42028 - 0.029 13.7 0.0 0.056 12.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_11 PF13086.6 ORF42028 - 0.032 14.0 0.0 0.05 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 ORF42028 - 0.045 13.6 0.0 0.11 12.4 0.0 1.7 1 1 0 1 1 1 0 Bacterial dnaA protein Sigma54_activ_2 PF14532.6 ORF42028 - 0.045 13.9 0.0 0.088 12.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain NACHT PF05729.12 ORF42028 - 0.12 12.3 0.1 0.38 10.7 0.0 1.8 1 1 1 2 2 2 0 NACHT domain ABC_tran PF00005.27 ORF42028 - 0.15 12.5 0.0 0.4 11.2 0.0 1.8 1 1 0 1 1 1 0 ABC transporter Alpha_kinase PF02816.18 ORF42010 - 3.3e-43 148.0 0.0 4.5e-43 147.5 0.0 1.2 1 0 0 1 1 1 1 Alpha-kinase family Pkinase PF00069.25 ORF40173 - 2.1e-67 227.3 0.0 2.4e-67 227.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF40173 - 4.7e-34 117.8 0.0 5.6e-34 117.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF40173 - 2.3e-05 23.5 1.0 3.4e-05 23.0 1.0 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF40173 - 6.4e-05 22.4 0.1 0.00036 19.9 0.0 2.1 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 ORF40173 - 0.00041 19.8 0.7 0.00072 19.0 0.7 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family YukC PF10140.9 ORF40173 - 0.021 13.7 0.1 0.029 13.2 0.1 1.2 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC APH PF01636.23 ORF40173 - 0.031 14.2 0.1 0.43 10.5 0.0 2.2 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF40173 - 0.037 12.8 0.0 0.092 11.5 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase FeoB_N PF02421.18 ORF40173 - 0.18 11.3 0.2 2.6 7.6 0.2 2.0 1 1 1 2 2 2 0 Ferrous iron transport protein B Sec34 PF04136.15 ORF37699 - 0.045 13.6 0.7 0.045 13.6 0.7 2.0 2 0 0 2 2 2 0 Sec34-like family Allexi_40kDa PF05549.11 ORF37699 - 0.39 10.2 5.2 0.069 12.7 1.1 1.6 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF1664 PF07889.12 ORF37699 - 1.8 8.6 5.6 1 9.4 0.7 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) RasGAP_C PF03836.15 ORF37699 - 5.2 7.2 8.9 1.2 9.3 2.9 2.6 1 1 2 3 3 3 0 RasGAP C-terminus MRP-S31 PF15433.6 ORF37699 - 6.4 6.4 12.9 7.4 6.1 12.4 1.4 1 1 0 1 1 1 0 Mitochondrial 28S ribosomal protein S31 MMR_HSR1 PF01926.23 ORF35741 - 7.2e-14 51.8 0.0 1.9e-13 50.5 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 ORF35741 - 1.4e-05 25.2 0.0 0.14 12.2 0.0 2.8 2 1 1 3 3 3 2 Dynamin family RsgA_GTPase PF03193.16 ORF35741 - 4.3e-05 23.5 0.0 0.14 12.1 0.0 2.5 2 1 0 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 ORF35741 - 0.00055 19.5 0.0 0.0019 17.8 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B Hydrolase_4 PF12146.8 ORF35741 - 0.0027 17.0 0.0 0.0066 15.7 0.0 1.6 1 0 0 1 1 1 1 Serine aminopeptidase, S33 TniB PF05621.11 ORF35741 - 0.02 14.3 0.0 0.058 12.8 0.0 1.8 1 0 0 1 1 1 0 Bacterial TniB protein AAA_22 PF13401.6 ORF35741 - 0.047 14.0 0.0 0.17 12.1 0.0 2.1 1 1 0 1 1 1 0 AAA domain SRPRB PF09439.10 ORF35741 - 0.053 12.9 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit HAGH_C PF16123.5 ORF33856 - 3e-15 56.5 0.0 6.5e-15 55.4 0.0 1.6 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 ORF33856 - 1.7e-07 31.5 0.3 0.0064 16.5 0.2 2.8 2 1 0 2 2 2 2 Metallo-beta-lactamase superfamily Zn_ribbon_2 PF12674.7 ORF33856 - 0.025 15.3 2.4 0.025 15.3 2.4 2.7 3 1 0 3 3 3 0 Putative zinc ribbon domain Lactamase_B_2 PF12706.7 ORF33856 - 0.14 11.6 0.1 0.28 10.6 0.1 1.5 1 1 0 1 1 1 0 Beta-lactamase superfamily domain NAD_binding_1 PF00175.21 ORF32662 - 3.7e-18 66.2 0.0 5.8e-18 65.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF32662 - 1.9e-09 37.8 0.0 3e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain DUF1987 PF09345.10 ORF32662 - 0.00099 18.8 0.0 0.0019 17.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1987) NAD_binding_6 PF08030.12 ORF32662 - 0.17 12.0 0.0 0.77 9.9 0.0 1.9 1 1 1 2 2 2 0 Ferric reductase NAD binding domain Ank_2 PF12796.7 ORF30026 - 3.7e-10 40.2 0.1 1.8e-09 38.1 0.1 2.1 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Arm PF00514.23 ORF30026 - 1.5e-08 34.4 8.5 1.1e-05 25.3 0.2 4.8 5 0 0 5 5 5 2 Armadillo/beta-catenin-like repeat Ank_3 PF13606.6 ORF30026 - 2.8e-08 33.4 0.1 0.34 11.6 0.0 4.3 3 1 1 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF30026 - 1.8e-06 28.4 0.1 0.021 15.4 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF30026 - 0.00056 20.2 0.2 14 6.4 0.1 3.7 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 ORF30026 - 0.0049 17.2 0.6 0.54 10.7 0.2 3.4 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Thioredoxin_14 PF18402.1 ORF26923 - 0.00036 20.6 0.2 0.11 12.5 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin-like domain Na_Ca_ex_C PF16494.5 ORF26923 - 0.12 12.8 0.8 0.29 11.6 0.0 2.0 2 1 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain FANCI_S1-cap PF14674.6 ORF26923 - 0.16 12.1 1.0 5 7.3 0.1 3.1 3 0 0 3 3 3 0 FANCI solenoid 1 cap PDZ_6 PF17820.1 ORF23424 - 0.0005 19.9 0.2 0.091 12.6 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF23424 - 0.0015 18.8 0.3 0.12 12.8 0.0 2.4 2 0 0 2 2 2 1 PDZ domain PhyH PF05721.13 ORF23424 - 0.012 15.9 0.0 0.066 13.5 0.0 2.1 2 0 0 2 2 2 0 Phytanoyl-CoA dioxygenase (PhyH) PEPCK_ATP PF01293.20 ORF20346 - 4.4e-83 279.5 0.0 5e-83 279.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_25 PF13481.6 ORF20346 - 0.12 12.0 0.1 0.22 11.1 0.1 1.3 1 0 0 1 1 1 0 AAA domain Reovirus_L2 PF06016.11 ORF20346 - 0.16 9.1 0.0 0.22 8.7 0.0 1.0 1 0 0 1 1 1 0 Reovirus core-spike protein lambda-2 (L2) Thioredoxin_14 PF18402.1 ORF13141 - 0.00036 20.6 0.2 0.11 12.5 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin-like domain Na_Ca_ex_C PF16494.5 ORF13141 - 0.12 12.8 0.8 0.29 11.6 0.0 2.0 2 1 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain FANCI_S1-cap PF14674.6 ORF13141 - 0.16 12.1 1.0 5 7.3 0.1 3.1 3 0 0 3 3 3 0 FANCI solenoid 1 cap Thioredoxin_14 PF18402.1 ORF112451 - 0.00036 20.6 0.2 0.11 12.5 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin-like domain Na_Ca_ex_C PF16494.5 ORF112451 - 0.12 12.8 0.8 0.29 11.6 0.0 2.0 2 1 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain FANCI_S1-cap PF14674.6 ORF112451 - 0.16 12.1 1.0 5 7.3 0.1 3.1 3 0 0 3 3 3 0 FANCI solenoid 1 cap Methyltransf_24 PF13578.6 ORF112324 - 7.8e-15 55.8 0.0 1.7e-14 54.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain rve PF00665.26 ORF110970 - 1.3e-30 106.1 0.0 3e-30 104.9 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF110970 - 2.7e-22 78.7 1.2 8.4e-21 73.9 0.3 2.5 2 0 0 2 2 2 1 Integrase core domain HTH_21 PF13276.6 ORF110970 - 5.1e-12 45.7 0.0 1.9e-11 43.9 0.0 2.0 2 0 0 2 2 2 1 HTH-like domain DDE_Tnp_IS240 PF13610.6 ORF110970 - 1e-09 38.8 0.0 1.8e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 DDE domain rve_3 PF13683.6 ORF110970 - 2.6e-09 36.7 0.0 5.3e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_ISAZ013 PF07592.11 ORF110970 - 0.14 11.2 0.0 0.25 10.3 0.0 1.4 1 0 0 1 1 1 0 Rhodopirellula transposase DDE domain Isochorismatase PF00857.20 ORF106659 - 2.6e-18 66.8 0.0 4.5e-18 66.0 0.0 1.4 1 1 0 1 1 1 1 Isochorismatase family GARP PF16731.5 ORF103600 - 0.00017 21.4 0.6 0.00017 21.4 0.6 2.9 1 1 1 3 3 3 1 Glutamic acid/alanine-rich protein of Trypanosoma SHE3 PF17078.5 ORF103600 - 0.00062 19.5 7.8 0.00062 19.5 7.8 3.7 2 1 1 3 3 2 2 SWI5-dependent HO expression protein 3 YabA PF06156.13 ORF103600 - 0.0029 18.2 36.7 0.59 10.8 5.1 4.3 1 1 2 4 4 4 3 Initiation control protein YabA ADIP PF11559.8 ORF103600 - 0.0038 17.3 37.3 0.036 14.2 7.5 3.7 2 1 1 3 3 3 2 Afadin- and alpha -actinin-Binding APG6_N PF17675.1 ORF103600 - 0.01 16.4 46.1 1.2 9.7 13.9 3.2 1 1 0 2 2 2 2 Apg6 coiled-coil region DUF812 PF05667.11 ORF103600 - 0.015 14.2 36.2 0.037 12.9 14.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF812) FlaC_arch PF05377.11 ORF103600 - 0.035 14.5 2.9 0.035 14.5 2.9 5.4 3 2 1 5 5 5 0 Flagella accessory protein C (FlaC) Mod_r PF07200.13 ORF103600 - 0.036 14.2 37.7 0.3 11.2 11.6 4.0 2 1 2 4 4 4 0 Modifier of rudimentary (Mod(r)) protein GAS PF13851.6 ORF103600 - 0.046 13.1 41.4 0.16 11.3 1.4 3.5 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding MCC-bdg_PDZ PF10506.9 ORF103600 - 0.062 13.3 0.8 0.062 13.3 0.8 4.1 2 1 3 5 5 5 0 PDZ domain of MCC-2 bdg protein for Usher syndrome TPR_MLP1_2 PF07926.12 ORF103600 - 0.078 13.0 35.8 0.61 10.2 1.3 3.8 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein ZapB PF06005.12 ORF103600 - 0.11 13.0 41.1 0.38 11.2 5.0 4.5 2 1 2 4 4 4 0 Cell division protein ZapB YliH PF10799.8 ORF103600 - 0.16 11.9 0.1 0.16 11.9 0.1 2.8 2 1 1 3 3 3 0 Biofilm formation protein (YliH/bssR) DUF1664 PF07889.12 ORF103600 - 0.17 12.0 23.2 1.7 8.7 2.4 3.5 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) TolA_bind_tri PF16331.5 ORF103600 - 0.2 11.8 0.3 0.2 11.8 0.3 4.7 2 1 2 4 4 4 0 TolA binding protein trimerisation TACC_C PF05010.14 ORF103600 - 0.22 11.3 36.8 0.4 10.5 3.6 3.9 1 1 1 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HMMR_N PF15905.5 ORF103600 - 0.23 10.9 40.8 1.4 8.3 17.4 2.4 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF4201 PF13870.6 ORF103600 - 0.47 10.2 42.5 0.43 10.3 11.0 4.1 1 1 3 4 4 4 0 Domain of unknown function (DUF4201) BLOC1_2 PF10046.9 ORF103600 - 0.55 10.6 30.2 4.4 7.7 4.0 5.2 2 2 2 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 WXG100 PF06013.12 ORF103600 - 0.65 10.3 6.6 4.6 7.6 0.1 4.0 4 1 0 4 4 4 0 Proteins of 100 residues with WXG DUF948 PF06103.11 ORF103600 - 0.89 9.9 10.0 4.2 7.7 0.5 3.9 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Rootletin PF15035.6 ORF103600 - 0.95 9.5 44.7 0.99 9.4 14.1 3.2 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion Filament PF00038.21 ORF103600 - 1.8 8.1 41.9 23 4.4 41.9 3.5 1 1 0 1 1 1 0 Intermediate filament protein Spc7 PF08317.11 ORF103600 - 2.2 7.1 41.3 0.021 13.7 18.3 3.1 1 1 2 3 3 3 0 Spc7 kinetochore protein DUF3450 PF11932.8 ORF103600 - 2.4 7.4 32.9 0.79 9.0 7.6 4.0 1 1 2 4 4 4 0 Protein of unknown function (DUF3450) HALZ PF02183.18 ORF103600 - 2.6 8.3 31.7 0.22 11.8 1.9 6.1 4 2 1 5 5 5 0 Homeobox associated leucine zipper FUSC PF04632.12 ORF103600 - 3.1 6.2 5.0 3 6.3 4.1 1.4 1 1 0 1 1 1 0 Fusaric acid resistance protein family Nup54_57_C PF18570.1 ORF103600 - 3.1 7.5 6.5 3.6 7.3 0.2 4.1 4 0 0 4 4 4 0 NUP57/Nup54 C-terminal domain CENP-F_leu_zip PF10473.9 ORF103600 - 3.3 7.7 48.7 5 7.1 7.2 4.1 1 1 3 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TSC22 PF01166.18 ORF103600 - 3.8 7.9 26.5 0.68 10.3 1.5 5.0 5 0 0 5 5 4 0 TSC-22/dip/bun family DUF4407 PF14362.6 ORF103600 - 5.5 6.2 18.6 1.7 7.9 11.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) KASH_CCD PF14662.6 ORF103600 - 7 6.4 44.0 0.19 11.5 3.3 3.4 1 1 2 3 3 3 0 Coiled-coil region of CCDC155 or KASH DUF4472 PF14739.6 ORF103600 - 7.4 7.4 35.5 3.6 8.3 3.6 3.9 1 1 2 4 4 4 0 Domain of unknown function (DUF4472) Golgin_A5 PF09787.9 ORF103600 - 7.6 5.9 41.2 9.7 5.6 20.1 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 ERM PF00769.19 ORF103600 - 9.5 5.9 42.4 3.7 7.3 3.1 3.0 1 1 2 3 3 3 0 Ezrin/radixin/moesin family Tropomyosin_1 PF12718.7 ORF103600 - 9.7 6.3 46.0 2.2 8.4 2.1 3.9 2 1 2 4 4 4 0 Tropomyosin like Aldose_epim PF01263.20 NODE_24184_length_860_cov_2.825455_g18813_i0reverse_frame_1 - 4.8e-52 177.1 0.0 5.5e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase Thioredoxin_6 PF13848.6 NODE_24182_length_860_cov_3.459394_g18811_i0forward_frame_1 - 0.021 14.7 0.0 0.041 13.8 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like domain CBF_beta PF02312.17 NODE_24177_length_860_cov_80.425455_g18806_i0reverse_frame_1 - 0.12 12.0 1.2 0.21 11.2 1.2 1.4 1 0 0 1 1 1 0 Core binding factor beta subunit MORN PF02493.20 NODE_24090_length_862_cov_154.614268_g18731_i0reverse_frame_2 - 1.5e-43 144.1 61.2 1.1e-07 31.3 0.6 11.1 11 0 0 11 11 11 10 MORN repeat BssC_TutF PF08201.11 NODE_24090_length_862_cov_154.614268_g18731_i0reverse_frame_2 - 0.16 12.0 1.8 7.2 6.7 0.2 2.8 2 0 0 2 2 2 0 BssC/TutF protein CIAPIN1 PF05093.13 NODE_24086_length_862_cov_260.099154_g18727_i0reverse_frame_2 - 1.8e-19 70.1 17.0 9.4e-18 64.6 15.1 2.9 1 1 1 2 2 2 1 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis DUF3016 PF11454.8 ORF96367 - 0.078 12.7 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3016) Meth_synt_1 PF08267.12 ORF91444 - 0.0039 16.8 0.4 0.0066 16.0 0.4 1.4 1 0 0 1 1 1 1 Cobalamin-independent synthase, N-terminal domain LRRFIP PF09738.9 ORF91444 - 0.0071 15.9 1.1 0.029 13.8 0.1 2.0 1 1 1 2 2 2 1 LRRFIP family CCD48 PF15799.5 ORF91444 - 0.027 12.8 0.2 0.047 12.0 0.0 1.4 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 48 DUF5398 PF17376.2 ORF91444 - 0.042 14.5 0.7 7.2 7.3 0.4 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5398) bZIP_1 PF00170.21 ORF91444 - 0.052 13.6 0.9 0.052 13.6 0.9 2.7 3 0 0 3 3 3 0 bZIP transcription factor bZIP_2 PF07716.15 ORF91444 - 7.4 6.7 9.4 0.15 12.1 1.3 2.4 3 0 0 3 3 3 0 Basic region leucine zipper CSTF2_hinge PF14327.6 ORF88586 - 5.3e-09 36.4 1.3 5.3e-09 36.4 1.3 2.3 2 0 0 2 2 2 1 Hinge domain of cleavage stimulation factor subunit 2 PAE PF03283.13 ORF83728 - 2.2e-47 161.9 0.1 6e-47 160.5 0.1 1.5 1 1 0 1 1 1 1 Pectinacetylesterase 2OG-FeII_Oxy_2 PF13532.6 ORF83685 - 3e-22 79.8 0.0 4.2e-22 79.3 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Tetraspanin PF00335.20 ORF83685 - 0.034 13.9 2.7 0.048 13.4 2.7 1.1 1 0 0 1 1 1 0 Tetraspanin family 2OG-FeII_Oxy PF03171.20 ORF83685 - 0.1 13.1 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily CorC_HlyC PF03471.17 ORF83685 - 0.13 12.3 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Transporter associated domain Rubis-subs-bind PF09273.11 ORF83456 - 1.9e-07 31.8 3.0 4e-07 30.8 3.0 1.6 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding SET PF00856.28 ORF83456 - 0.00013 22.4 0.0 0.0012 19.3 0.0 2.0 2 0 0 2 2 2 1 SET domain CARMIL_C PF16000.5 ORF83456 - 0.037 13.7 0.4 0.048 13.3 0.4 1.1 1 0 0 1 1 1 0 CARMIL C-terminus adh_short PF00106.25 ORF79091 - 3.6e-27 95.1 0.0 1.9e-19 69.9 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF79091 - 1.1e-19 70.9 0.0 2.8e-12 46.7 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF79091 - 0.00097 19.1 0.0 0.0014 18.6 0.0 1.2 1 0 0 1 1 1 1 KR domain baeRF_family6 PF18848.1 ORF79091 - 0.03 14.7 0.0 0.08 13.4 0.0 1.7 1 1 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 6 Asp PF00026.23 ORF71234 - 4.2e-21 75.7 1.3 5.2e-21 75.4 1.3 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease MatE PF01554.18 ORF70740 - 1.8e-19 69.9 2.8 1.8e-19 69.9 2.8 2.6 3 0 0 3 3 3 1 MatE EI24 PF07264.11 ORF70740 - 4.5e-05 23.8 0.4 0.00015 22.1 0.4 1.8 1 1 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) MurJ PF03023.14 ORF70740 - 0.0068 15.1 5.7 0.016 13.8 0.1 2.1 2 0 0 2 2 2 2 Lipid II flippase MurJ Polysacc_synt_C PF14667.6 ORF70740 - 0.63 10.1 17.7 0.26 11.3 3.2 3.0 3 1 0 3 3 3 0 Polysaccharide biosynthesis C-terminal domain Cast PF10174.9 ORF70527 - 0.0057 15.0 19.4 0.0072 14.6 19.4 1.1 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone VPS38 PF17649.1 ORF70527 - 0.0061 15.5 5.6 0.0082 15.1 5.6 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting 38 Prominin PF05478.11 ORF70527 - 0.011 13.8 10.0 0.013 13.5 10.0 1.2 1 0 0 1 1 1 0 Prominin Lebercilin PF15619.6 ORF70527 - 0.011 15.3 28.5 0.069 12.8 16.0 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF1664 PF07889.12 ORF70527 - 0.013 15.5 5.2 0.013 15.5 5.2 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Lipoprotein_6 PF01441.19 ORF70527 - 0.026 14.5 2.2 0.037 14.0 2.2 1.2 1 0 0 1 1 1 0 Lipoprotein Fib_alpha PF08702.10 ORF70527 - 0.066 13.4 13.6 0.75 10.0 2.2 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family FAM184 PF15665.5 ORF70527 - 0.078 12.8 20.8 0.12 12.2 20.8 1.2 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Spc7 PF08317.11 ORF70527 - 0.081 11.8 28.1 0.034 13.0 23.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein Urocanase PF01175.18 ORF70527 - 0.12 12.0 3.0 0.18 11.4 3.0 1.3 1 0 0 1 1 1 0 Urocanase Rossmann-like domain AAA_13 PF13166.6 ORF70527 - 0.28 9.8 14.4 0.34 9.5 14.4 1.1 1 0 0 1 1 1 0 AAA domain ATG16 PF08614.11 ORF70527 - 0.51 10.5 33.4 5.7 7.1 27.9 2.6 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Fez1 PF06818.15 ORF70527 - 0.54 10.7 26.5 1.1 9.6 25.9 1.7 1 1 0 1 1 1 0 Fez1 DUF724 PF05266.14 ORF70527 - 0.6 9.9 15.8 0.32 10.8 13.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Cluap1 PF10234.9 ORF70527 - 0.66 9.3 18.4 3 7.2 7.6 2.1 1 1 1 2 2 2 0 Clusterin-associated protein-1 TPR_MLP1_2 PF07926.12 ORF70527 - 0.71 9.9 34.4 0.12 12.5 9.8 2.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein MAP65_ASE1 PF03999.12 ORF70527 - 0.79 8.3 14.2 1.2 7.7 14.2 1.3 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) IFT57 PF10498.9 ORF70527 - 0.85 8.5 16.4 0.49 9.3 13.3 1.8 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 DUF3584 PF12128.8 ORF70527 - 1 6.8 26.0 1.4 6.3 26.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) FUSC PF04632.12 ORF70527 - 1.2 7.6 13.0 1.4 7.4 13.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family CENP-H PF05837.12 ORF70527 - 1.2 9.6 27.0 0.7 10.3 13.3 2.3 1 1 1 2 2 2 0 Centromere protein H (CENP-H) CCDC144C PF14915.6 ORF70527 - 1.4 7.9 26.4 0.1 11.7 11.4 2.6 1 1 2 3 3 3 0 CCDC144C protein coiled-coil region SPAM PF02090.15 ORF70527 - 1.6 8.6 14.7 0.47 10.3 3.4 2.3 1 1 1 2 2 2 0 Salmonella surface presentation of antigen gene type M protein COG2 PF06148.11 ORF70527 - 1.7 8.8 13.9 0.38 10.8 4.5 2.6 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4407 PF14362.6 ORF70527 - 1.7 7.9 18.5 2.4 7.4 18.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Gp58 PF07902.11 ORF70527 - 2.2 6.5 11.2 2.9 6.1 11.2 1.1 1 0 0 1 1 1 0 gp58-like protein V_ATPase_I PF01496.19 ORF70527 - 2.4 6.0 9.3 3.3 5.5 9.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HAUS-augmin3 PF14932.6 ORF70527 - 3.1 7.3 26.7 8.6 5.8 26.8 1.7 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 GAS PF13851.6 ORF70527 - 3.2 7.1 26.1 0.22 10.9 8.0 2.2 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Sec34 PF04136.15 ORF70527 - 4.2 7.2 14.4 0.87 9.5 1.7 2.5 1 1 1 2 2 2 0 Sec34-like family DHR10 PF18595.1 ORF70527 - 4.7 7.3 34.2 12 6.0 15.1 2.3 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Atg14 PF10186.9 ORF70527 - 5 6.1 21.1 12 4.9 21.1 1.6 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 MMPL PF03176.15 ORF70527 - 5.9 5.7 6.7 7.5 5.4 6.7 1.1 1 0 0 1 1 1 0 MMPL family BST2 PF16716.5 ORF70527 - 6.6 7.4 31.8 0.23 12.1 18.7 3.1 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 Phage_GPO PF05929.11 ORF70527 - 7 6.2 21.3 2.5 7.6 7.1 2.1 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF4200 PF13863.6 ORF70527 - 7.2 7.0 26.3 1.3 9.4 14.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) ADIP PF11559.8 ORF70527 - 7.5 6.6 27.2 29 4.7 18.4 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding TMPIT PF07851.13 ORF70527 - 7.6 5.7 14.7 7.7 5.7 13.5 1.7 1 1 0 1 1 1 0 TMPIT-like protein FliJ PF02050.16 ORF70527 - 7.6 6.8 34.6 0.6 10.3 29.3 1.9 2 0 0 2 2 2 0 Flagellar FliJ protein FliD_C PF07195.12 ORF70527 - 7.9 5.8 10.8 1.2e+02 1.9 10.9 2.3 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus UPF0242 PF06785.11 ORF70527 - 9.4 6.3 29.6 12 5.9 15.1 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF5082 PF16888.5 ORF70527 - 10 6.5 18.7 0.99 9.7 9.5 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Cuticle_2 PF08184.11 ORF69102 - 0.0055 16.7 0.0 0.012 15.6 0.0 1.6 1 0 0 1 1 1 1 Cuticle protein 7 isoform family DUF4207 PF13904.6 ORF66545 - 5.3 6.7 30.3 8.9 5.9 30.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4207) ATP-synt PF00231.19 ORF6509 - 6.9e-97 324.5 0.0 7.6e-97 324.4 0.0 1.0 1 0 0 1 1 1 1 ATP synthase DUF4121 PF13497.6 ORF62028 - 0.54 9.4 2.7 1 8.5 0.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4121) Acyl_transf_3 PF01757.22 ORF61388 - 0.00027 20.1 10.6 0.0004 19.6 10.6 1.3 1 0 0 1 1 1 1 Acyltransferase family 3Beta_HSD PF01073.19 ORF57606 - 2.7e-14 52.9 0.0 3.4e-14 52.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF57606 - 5.7e-12 45.6 0.2 1.7e-11 44.1 0.2 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF57606 - 8.4e-07 28.4 0.0 1.1e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF57606 - 3e-05 23.3 0.1 0.00073 18.8 0.1 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF57606 - 0.00027 20.9 0.0 0.00063 19.7 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF57606 - 0.0014 18.1 0.2 0.0021 17.5 0.2 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Phage_gp49_66 PF13876.6 ORF57606 - 0.047 14.0 0.2 0.5 10.7 0.1 2.3 1 1 1 2 2 2 0 Phage protein (N4 Gp49/phage Sf6 gene 66) family DUF3381 PF11861.8 ORF49355 - 0.0017 18.2 2.9 0.0034 17.2 2.9 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3381) Herpes_UL17 PF04559.12 ORF49355 - 0.25 10.1 1.3 0.33 9.7 1.3 1.1 1 0 0 1 1 1 0 Herpesvirus UL17 protein SPATA3 PF15662.5 ORF49355 - 1 10.0 4.8 1.8 9.2 4.8 1.3 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family TTL PF03133.15 ORF48630 - 2.4e-77 260.0 9.6 3.1e-77 259.6 9.6 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_ST PF14397.6 ORF48630 - 1.1e-06 28.2 0.0 0.043 13.1 0.0 2.9 2 1 2 4 4 4 2 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 ORF48630 - 1.4e-06 27.7 0.2 9.8e-05 21.7 0.0 2.7 2 1 0 3 3 3 1 YheC/D like ATP-grasp Dala_Dala_lig_C PF07478.13 ORF48630 - 0.0018 17.9 0.0 0.0033 17.0 0.0 1.6 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus DUF573 PF04504.14 ORF48630 - 1.1 10.0 5.7 30 5.4 0.9 2.4 1 1 1 2 2 2 0 Protein of unknown function, DUF573 MORN PF02493.20 ORF46679 - 1.4e-18 65.6 22.6 5.1e-08 32.4 0.3 5.7 5 0 0 5 5 5 4 MORN repeat DUF3048_C PF17479.2 ORF46679 - 0.14 12.5 6.0 0.3 11.5 0.8 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain 3Beta_HSD PF01073.19 ORF46094 - 2.6e-14 52.9 0.0 3.4e-14 52.5 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF46094 - 5.7e-12 45.6 0.2 1.7e-11 44.1 0.2 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF46094 - 8.6e-07 28.4 0.0 1.1e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF46094 - 3e-05 23.3 0.1 0.00073 18.8 0.1 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF46094 - 0.00027 20.9 0.0 0.00063 19.7 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF46094 - 0.0014 18.1 0.2 0.0021 17.5 0.2 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Phage_gp49_66 PF13876.6 ORF46094 - 0.044 14.1 0.4 0.5 10.7 0.1 2.5 2 1 1 3 3 3 0 Phage protein (N4 Gp49/phage Sf6 gene 66) family NARP1 PF12569.8 ORF46094 - 0.15 11.0 0.0 0.26 10.2 0.0 1.3 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Leuk-A4-hydro_C PF09127.11 ORF37577 - 1e-28 99.6 0.0 1.5e-28 99.1 0.0 1.3 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1 PF01433.20 ORF37577 - 1.4e-08 34.6 0.0 2e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M1 domain Bestrophin PF01062.21 ORF3303 - 9.4e-08 31.8 0.1 1.4e-07 31.2 0.1 1.2 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Ribonuc_red_sm PF00268.21 ORF32410 - 9.9e-58 195.8 0.5 1.2e-57 195.5 0.5 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain BROMI PF14961.6 ORF32410 - 0.094 10.1 0.0 0.12 9.7 0.0 1.1 1 0 0 1 1 1 0 Broad-minded protein ApoO PF09769.9 ORF31880 - 0.0045 17.0 5.3 0.014 15.3 0.3 2.4 1 1 1 2 2 2 1 Apolipoprotein O TAN PF11640.8 ORF31880 - 0.075 13.2 6.1 0.053 13.6 4.0 1.7 2 0 0 2 2 2 0 Telomere-length maintenance and DNA damage repair CART PF06373.11 ORF31880 - 0.24 11.6 1.6 15 5.9 0.2 2.7 2 0 0 2 2 2 0 Cocaine and amphetamine regulated transcript protein (CART) DIT1_PvcA PF05141.12 ORF31880 - 1 8.8 6.3 0.94 8.9 5.6 1.3 1 1 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein DUF4239 PF14023.6 ORF31880 - 2 8.1 4.8 2.9 7.6 4.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4239) WAC_Acf1_DNA_bd PF10537.9 ORF31880 - 2.9 8.5 7.4 2.2 8.8 5.0 2.1 2 1 0 2 2 2 0 ATP-utilising chromatin assembly and remodelling N-terminal FUSC PF04632.12 ORF31880 - 3.3 6.1 7.2 0.57 8.7 2.7 1.7 1 1 1 2 2 2 0 Fusaric acid resistance protein family Flu_NS2 PF00601.19 ORF31880 - 4.7 7.6 7.7 6.7 7.1 4.2 2.6 1 1 1 2 2 2 0 Influenza non-structural protein (NS2) DUF5388 PF17363.2 ORF31880 - 4.7 7.5 5.7 0.73 10.1 0.2 2.5 3 1 2 5 5 5 0 Family of unknown function (DUF5388) YtxH PF12732.7 ORF31880 - 7.2 7.2 9.0 59 4.3 4.1 3.1 1 1 1 2 2 2 0 YtxH-like protein CorA PF01544.18 ORF31880 - 7.7 5.7 9.3 6.7 5.9 6.3 1.9 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein DUF1664 PF07889.12 ORF31880 - 9.3 6.3 15.8 0.81 9.7 3.5 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) HisKA_3 PF07730.13 ORF31880 - 9.7 6.8 13.0 19 5.8 0.2 3.8 1 1 3 4 4 4 0 Histidine kinase DPCD PF14913.6 ORF30860 - 2.7e-70 235.6 0.1 3.5e-70 235.2 0.1 1.1 1 0 0 1 1 1 1 DPCD protein family AMPK1_CBM PF16561.5 ORF30739 - 4.9e-27 94.0 0.5 8.1e-27 93.3 0.5 1.4 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase AMPKBI PF04739.15 ORF30739 - 1.3e-08 35.0 0.4 3.5e-08 33.6 0.4 1.7 1 0 0 1 1 1 1 5'-AMP-activated protein kinase beta subunit, interaction domain TFA2_Winged_2 PF18121.1 ORF30036 - 0.012 15.3 0.1 0.34 10.6 0.0 3.2 4 1 0 4 4 4 0 TFA2 Winged helix domain 2 SIR2 PF02146.17 ORF27999 - 1.5e-17 64.1 0.0 2.3e-17 63.5 0.0 1.3 1 0 0 1 1 1 1 Sir2 family Band_7 PF01145.25 ORF27159 - 1.7e-16 60.7 0.8 3.3e-16 59.8 0.0 1.7 1 1 1 2 2 2 1 SPFH domain / Band 7 family Asp-B-Hydro_N PF05279.11 ORF27159 - 0.17 11.9 2.8 0.24 11.4 2.8 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Alba PF01918.21 ORF24779 - 4e-11 42.6 0.1 7.4e-11 41.7 0.1 1.4 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 ORF24779 - 0.062 13.3 0.9 0.12 12.3 0.2 1.7 1 1 1 2 2 2 0 Rpp20 subunit of nuclear RNase MRP and P Rubis-subs-bind PF09273.11 ORF24521 - 1.9e-07 31.8 3.0 4e-07 30.8 3.0 1.6 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding SET PF00856.28 ORF24521 - 0.00013 22.4 0.0 0.0012 19.3 0.0 2.0 2 0 0 2 2 2 1 SET domain CARMIL_C PF16000.5 ORF24521 - 0.037 13.7 0.4 0.048 13.3 0.4 1.1 1 0 0 1 1 1 0 CARMIL C-terminus ER PF01133.17 ORF23713 - 0.39 10.8 2.9 0.5 10.4 1.0 1.9 1 1 1 2 2 2 0 Enhancer of rudimentary Med26 PF08711.11 ORF23599 - 8.8e-08 32.1 0.0 5.2e-07 29.6 0.0 2.3 2 0 0 2 2 2 1 TFIIS helical bundle-like domain SRP-alpha_N PF04086.13 ORF23599 - 0.044 13.7 6.3 0.057 13.3 6.3 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal 3Beta_HSD PF01073.19 ORF23515 - 2.7e-14 52.9 0.0 3.4e-14 52.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF23515 - 5.7e-12 45.6 0.2 1.7e-11 44.1 0.2 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF23515 - 8.4e-07 28.4 0.0 1.1e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF23515 - 3e-05 23.3 0.1 0.00073 18.8 0.1 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF23515 - 0.00027 20.9 0.0 0.00063 19.7 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF23515 - 0.0014 18.1 0.2 0.0021 17.5 0.2 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Phage_gp49_66 PF13876.6 ORF23515 - 0.047 14.0 0.2 0.5 10.7 0.1 2.3 1 1 1 2 2 2 0 Phage protein (N4 Gp49/phage Sf6 gene 66) family polyprenyl_synt PF00348.17 ORF21944 - 2.1e-43 148.3 1.1 2.6e-43 148.0 1.1 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase zinc_ribbon_11 PF11682.8 ORF1935 - 0.09 12.8 0.6 0.18 11.8 0.2 1.7 2 0 0 2 2 2 0 Probable zinc-ribbon DivIC PF04977.15 ORF1935 - 1.2 8.9 6.8 2.7 7.8 6.8 1.5 1 0 0 1 1 1 0 Septum formation initiator DUF2070 PF09843.9 ORF14910 - 5.4 5.2 20.4 7.3 4.7 20.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DEAD PF00270.29 ORF11585 - 4.7e-11 42.8 0.0 6.6e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 ORF11585 - 1.8e-05 24.8 0.0 2.6e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 ORF11585 - 0.01 16.1 0.4 0.039 14.2 0.4 1.9 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 ORF11585 - 0.055 13.3 0.0 0.088 12.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF11585 - 0.071 13.0 0.1 0.17 11.8 0.0 1.8 2 1 0 2 2 2 0 NACHT domain RsgA_GTPase PF03193.16 ORF11585 - 0.071 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 ORF11585 - 0.079 13.5 0.0 0.11 13.0 0.0 1.5 1 1 0 1 1 1 0 ABC transporter AAA_23 PF13476.6 ORF11585 - 0.1 13.1 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Alba PF01918.21 ORF112045 - 4e-11 42.6 0.1 7.4e-11 41.7 0.1 1.4 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 ORF112045 - 0.062 13.3 0.9 0.12 12.3 0.2 1.7 1 1 1 2 2 2 0 Rpp20 subunit of nuclear RNase MRP and P Amidase PF01425.21 ORF106091 - 1e-19 70.8 0.0 1.2e-19 70.6 0.0 1.0 1 0 0 1 1 1 1 Amidase Ribosomal_S3_C PF00189.20 ORF106048 - 0.061 13.8 0.4 0.11 13.0 0.4 1.3 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain LAP1C PF05609.12 ORF100319 - 0.01 14.9 10.6 0.014 14.5 10.6 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Shisa PF13908.6 ORF100319 - 0.041 14.1 0.3 0.041 14.1 0.3 2.2 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator Macoilin PF09726.9 ORF100319 - 0.5 8.9 12.1 0.57 8.7 12.1 1.1 1 0 0 1 1 1 0 Macoilin family Peptidase_U49 PF10463.9 ORF100319 - 6.2 6.5 5.6 3.8 7.2 3.8 1.5 1 1 0 1 1 1 0 Peptidase U49 Recombinase PF07508.13 NODE_24333_length_856_cov_2.334957_g18941_i0forward_frame_1 - 1.9e-20 73.2 3.9 2.9e-20 72.6 3.9 1.3 1 0 0 1 1 1 1 Recombinase Resolvase PF00239.21 NODE_24333_length_856_cov_2.334957_g18941_i0forward_frame_1 - 0.00046 20.3 0.0 0.00078 19.6 0.0 1.4 1 0 0 1 1 1 1 Resolvase, N terminal domain Methyltransf_20 PF12147.8 NODE_24333_length_856_cov_2.334957_g18941_i0forward_frame_1 - 0.017 14.3 0.0 0.027 13.6 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase TraA PF05513.11 NODE_24221_length_859_cov_5.057039_g18842_i0forward_frame_2 - 0.18 12.2 0.0 0.49 10.7 0.0 1.7 2 0 0 2 2 2 0 TraA MAT1 PF06391.13 NODE_24221_length_859_cov_5.057039_g18842_i0forward_frame_2 - 2.9 7.7 8.1 4 7.2 8.1 1.1 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 ABC_tran PF00005.27 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 2.1e-30 106.0 0.0 2.9e-30 105.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 7.3e-07 29.3 0.1 0.00032 20.6 0.0 2.4 1 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.00032 20.2 0.9 0.0052 16.2 0.9 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF2813 PF11398.8 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.00033 20.0 0.0 0.00042 19.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) AAA_29 PF13555.6 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.00052 19.7 0.0 0.0013 18.4 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.00097 19.6 0.0 0.0014 19.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.0011 19.5 0.1 0.0017 18.9 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_27 PF13514.6 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.0032 17.1 0.0 0.0051 16.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_13 PF13166.6 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.0056 15.4 0.0 0.5 9.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.0056 16.6 0.4 0.014 15.3 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.016 15.4 0.1 0.044 14.1 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.02 14.6 0.1 0.028 14.1 0.1 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 NODE_24185_length_860_cov_2.083636_g18814_i0reverse_frame_3 - 0.053 13.2 0.0 0.13 12.0 0.0 1.7 1 1 0 1 1 1 0 AAA domain Peptidase_M48 PF01435.18 NODE_24182_length_860_cov_3.459394_g18811_i0reverse_frame_3 - 7.7e-19 68.2 0.6 1.1e-18 67.7 0.6 1.2 1 0 0 1 1 1 1 Peptidase family M48 DUF4157 PF13699.6 NODE_24182_length_860_cov_3.459394_g18811_i0reverse_frame_3 - 0.0053 17.0 1.4 0.011 16.0 0.2 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4157) DUF2268 PF10026.9 NODE_24182_length_860_cov_3.459394_g18811_i0reverse_frame_3 - 0.068 12.7 0.2 0.13 11.8 0.2 1.5 1 0 0 1 1 1 0 Predicted Zn-dependent protease (DUF2268) Peptidase_M78 PF06114.13 NODE_24182_length_860_cov_3.459394_g18811_i0reverse_frame_3 - 0.12 12.3 0.2 0.49 10.3 0.1 2.0 1 1 0 1 1 1 0 IrrE N-terminal-like domain Endonuc-BsobI PF09194.10 NODE_24170_length_860_cov_138.663030_g11283_i2forward_frame_2 - 0.14 11.3 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease BsobI MYO10_CC PF16735.5 NODE_24121_length_861_cov_325.487893_g18758_i0reverse_frame_2 - 0.0025 17.9 2.4 0.0025 17.9 2.4 2.2 2 0 0 2 2 2 1 Unconventional myosin-X coiled coil domain zf_CCCH_5 PF18384.1 NODE_24121_length_861_cov_325.487893_g18758_i0forward_frame_2 - 0.057 13.5 0.1 0.057 13.5 0.1 3.0 2 1 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) ADK PF00406.22 ORF95523 - 8.3e-34 116.9 0.0 1.2e-33 116.3 0.0 1.2 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF95523 - 3.3e-18 66.4 0.1 5.1e-18 65.8 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF95523 - 3.7e-08 34.0 0.0 7.3e-08 33.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain Hydin_ADK PF17213.3 ORF95523 - 0.00043 20.6 1.1 0.34 11.2 0.1 2.3 1 1 1 2 2 2 2 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 ORF95523 - 0.0006 20.0 0.2 0.0029 17.8 0.1 2.2 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 ORF95523 - 0.0067 16.9 0.0 0.018 15.5 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 ORF95523 - 0.016 14.9 0.3 3.4 7.3 0.0 2.8 2 1 1 3 3 3 0 Thymidylate kinase LigD_N PF13298.6 ORF95523 - 0.11 12.7 0.1 0.25 11.6 0.1 1.5 1 0 0 1 1 1 0 DNA polymerase Ligase (LigD) ABC_tran PF00005.27 ORF95523 - 0.16 12.5 0.3 0.42 11.1 0.3 1.9 1 1 0 1 1 1 0 ABC transporter Pkinase PF00069.25 ORF95451 - 4e-51 173.9 0.0 4.7e-51 173.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95451 - 6.5e-25 87.9 0.0 9.5e-25 87.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF95451 - 4.9e-08 32.6 0.0 6e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF95451 - 0.065 12.0 0.0 0.095 11.5 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase DUF2877 PF11392.8 ORF93440 - 1.3e-28 99.9 0.1 2e-28 99.3 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2877) Arm PF00514.23 ORF93026 - 2.2e-22 78.3 17.0 1.4e-05 24.9 0.0 6.5 6 1 0 6 6 6 5 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 ORF93026 - 0.0072 16.7 0.6 0.0072 16.7 0.6 3.9 1 1 1 3 3 3 1 HEAT repeats RICTOR_N PF14664.6 ORF93026 - 0.0085 15.1 0.0 0.021 13.9 0.0 1.6 2 1 0 2 2 2 1 Rapamycin-insensitive companion of mTOR, N-term Aconitase_B_N PF11791.8 ORF93026 - 0.033 14.3 2.6 0.32 11.0 0.1 3.0 1 1 1 3 3 3 0 Aconitate B N-terminal domain NAD_binding_6 PF08030.12 ORF92898 - 2.1e-16 60.4 0.0 5e-14 52.7 0.0 2.2 1 1 0 1 1 1 1 Ferric reductase NAD binding domain DoxX PF07681.12 ORF89122 - 0.0048 17.5 18.8 0.0098 16.5 2.2 2.3 2 0 0 2 2 2 2 DoxX Helicase_C PF00271.31 ORF89103 - 0.00032 21.0 3.7 0.00072 19.9 1.6 2.6 2 2 0 2 2 2 1 Helicase conserved C-terminal domain SecA_PP_bind PF01043.20 ORF89103 - 0.00056 20.5 0.1 0.0013 19.4 0.1 1.6 1 0 0 1 1 1 1 SecA preprotein cross-linking domain VEG PF06257.11 ORF86112 - 1.4 9.0 7.9 0.26 11.4 1.2 2.6 2 0 0 2 2 2 0 Biofilm formation stimulator VEG Dsh_C PF12316.8 ORF86112 - 2.1 8.7 10.4 3.5 8.0 10.4 1.4 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal FTR1 PF03239.14 ORF86112 - 4 6.5 3.9 19 4.3 0.6 2.3 2 0 0 2 2 2 0 Iron permease FTR1 family DUF87 PF01935.17 ORF86112 - 5.6 7.0 12.9 0.036 14.1 1.2 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain MT0933_antitox PF14013.6 ORF86112 - 6.4 7.2 24.6 7.6 6.9 2.1 3.4 2 1 0 2 2 2 0 MT0933-like antitoxin protein KH_1 PF00013.29 ORF81978 - 2.7e-21 75.1 3.0 5.1e-12 45.4 0.1 3.2 3 0 0 3 3 3 2 KH domain KH_2 PF07650.17 ORF81978 - 0.0024 17.6 1.0 0.0062 16.3 1.0 1.8 1 0 0 1 1 1 1 KH domain KH_5 PF13184.6 ORF81978 - 0.095 12.8 0.9 0.57 10.3 0.2 2.5 2 0 0 2 2 2 0 NusA-like KH domain Glyco_transf_25 PF01755.17 ORF7909 - 7.2e-05 22.7 0.0 0.0023 17.8 0.0 2.3 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) DUF1681 PF07933.14 ORF7909 - 0.13 11.9 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) Translin PF01997.16 ORF79088 - 1.5e-30 106.7 0.0 1.9e-25 90.0 0.0 2.2 2 0 0 2 2 2 2 Translin family ANTAR PF03861.14 ORF79088 - 0.0054 16.5 0.6 0.0054 16.5 0.6 1.6 2 0 0 2 2 2 1 ANTAR domain Glyco_transf_25 PF01755.17 ORF77282 - 7.2e-05 22.7 0.0 0.0023 17.8 0.0 2.3 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) DUF1681 PF07933.14 ORF77282 - 0.13 11.9 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) Asp PF00026.23 ORF77177 - 2.2e-34 119.3 0.0 2.4e-18 66.6 0.0 2.1 2 0 0 2 2 2 2 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF77177 - 0.018 14.8 0.0 0.041 13.7 0.0 1.6 1 1 0 1 1 1 0 Xylanase inhibitor C-terminal C2 PF00168.30 ORF75736 - 1.7e-30 105.3 0.0 4.3e-22 78.4 0.0 2.2 2 0 0 2 2 2 2 C2 domain KH_1 PF00013.29 ORF74640 - 2.7e-21 75.1 3.0 5.1e-12 45.4 0.1 3.2 3 0 0 3 3 3 2 KH domain KH_2 PF07650.17 ORF74640 - 0.0024 17.6 1.0 0.0062 16.3 1.0 1.8 1 0 0 1 1 1 1 KH domain KH_5 PF13184.6 ORF74640 - 0.095 12.8 0.9 0.57 10.3 0.2 2.5 2 0 0 2 2 2 0 NusA-like KH domain FBPase PF00316.20 ORF72011 - 7.8e-34 116.8 0.5 1e-33 116.4 0.1 1.4 2 0 0 2 2 2 1 Fructose-1-6-bisphosphatase, N-terminal domain Peptidase_C97 PF05903.14 ORF68945 - 1.2e-10 41.4 0.0 1.7e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 PPPDE putative peptidase domain Nucleotid_trans PF03407.16 ORF64599 - 6.5e-08 32.8 0.1 9.3e-08 32.3 0.1 1.2 1 0 0 1 1 1 1 Nucleotide-diphospho-sugar transferase RAP80_UIM PF18282.1 ORF64599 - 0.15 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 RAP80 N-terminal ubiquitin interaction motif Peptidase_C1 PF00112.23 ORF62650 - 1.3e-24 87.6 0.4 1.8e-24 87.1 0.4 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF62650 - 1.5e-14 54.1 6.8 1.5e-14 54.1 6.8 2.0 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Propeptide_C1 PF08127.13 ORF62650 - 0.001 18.9 0.8 0.0022 17.8 0.8 1.5 1 0 0 1 1 1 1 Peptidase family C1 propeptide ArsP_1 PF03773.13 ORF60543 - 0.018 14.2 0.2 0.028 13.6 0.2 1.2 1 0 0 1 1 1 0 Predicted permease Pex2_Pex12 PF04757.14 ORF6053 - 0.074 12.6 0.2 0.19 11.3 0.0 1.7 2 0 0 2 2 2 0 Pex2 / Pex12 amino terminal region IL6 PF00489.17 ORF603 - 0.046 13.3 0.0 0.15 11.6 0.0 1.7 2 0 0 2 2 2 0 Interleukin-6/G-CSF/MGF family ABC2_membrane_3 PF12698.7 ORF58769 - 2.8e-08 33.2 2.2 3.8e-08 32.8 2.2 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein Exo_endo_phos PF03372.23 ORF57782 - 0.0017 17.9 0.0 0.0041 16.7 0.0 1.7 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family PhnG PF06754.12 ORF57782 - 0.043 13.8 0.0 0.1 12.6 0.0 1.5 2 0 0 2 2 2 0 Phosphonate metabolism protein PhnG SART-1 PF03343.13 ORF56586 - 1.7e-22 79.8 13.7 7.2e-18 64.5 0.2 2.0 1 1 1 2 2 2 2 SART-1 family CLASP_N PF12348.8 ORF56586 - 0.039 13.5 0.3 0.072 12.6 0.1 1.5 2 0 0 2 2 2 0 CLASP N terminal Carb_anhydrase PF00194.21 ORF51789 - 9.3e-14 51.6 0.0 1.3e-13 51.1 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Rrn6 PF10214.9 ORF51789 - 9.8 4.5 5.3 13 4.1 5.3 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUSP PF06337.12 ORF4862 - 4.3e-19 68.9 3.8 4.3e-19 68.9 3.8 2.2 2 0 0 2 2 2 1 DUSP domain DUF1018 PF06252.12 ORF4862 - 0.05 14.6 1.7 0.085 13.8 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1018) Lipoprotein_X PF03305.13 ORF4862 - 0.55 10.0 8.7 0.06 13.1 3.3 2.1 1 1 1 2 2 2 0 Mycoplasma MG185/MG260 protein PMSR PF01625.21 ORF4862 - 1 9.6 6.6 2.6 8.2 0.2 2.8 2 1 1 3 3 3 0 Peptide methionine sulfoxide reductase zf-C2HC_2 PF13913.6 ORF47902 - 1.9e-06 27.6 1.8 3.2e-06 26.9 1.8 1.4 1 0 0 1 1 1 1 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF47902 - 0.094 13.6 0.3 0.21 12.5 0.3 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger FAD-SLDH PF12318.8 ORF45515 - 0.083 12.9 0.2 0.13 12.3 0.2 1.4 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase CcmF_C PF16327.5 ORF45415 - 2.8e-60 204.3 11.6 5.9e-37 127.7 0.1 2.1 1 1 1 2 2 2 2 Cytochrome c-type biogenesis protein CcmF C-terminal TMEM100 PF16311.5 ORF45415 - 0.04 13.5 1.3 0.04 13.5 1.3 2.6 3 0 0 3 3 3 0 Transmembrane protein 100 Beta-lactamase2 PF13354.6 ORF45063 - 1.3e-39 135.9 0.0 1.6e-39 135.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 ORF45063 - 1.4e-30 106.7 0.0 2.7e-30 105.8 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 ORF45063 - 2.3e-06 27.3 0.0 5e-06 26.1 0.0 1.5 1 1 1 2 2 2 1 D-alanyl-D-alanine carboxypeptidase ATG16 PF08614.11 ORF42595 - 0.0086 16.3 19.5 0.0086 16.3 19.5 3.2 2 1 1 3 3 3 2 Autophagy protein 16 (ATG16) Sec34 PF04136.15 ORF42595 - 9.3 6.1 19.2 13 5.7 8.8 2.9 2 1 1 3 3 3 0 Sec34-like family Beta-lactamase2 PF13354.6 ORF42355 - 1.3e-39 135.9 0.0 1.6e-39 135.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 ORF42355 - 1.4e-30 106.7 0.0 2.7e-30 105.8 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 ORF42355 - 2.3e-06 27.3 0.0 5e-06 26.1 0.0 1.5 1 1 1 2 2 2 1 D-alanyl-D-alanine carboxypeptidase Aa_trans PF01490.18 ORF41577 - 9.5e-33 113.5 24.9 1.1e-32 113.3 24.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein FtsX PF02687.21 ORF41261 - 1.1e-12 48.3 7.0 1.1e-12 48.3 7.0 2.1 2 0 0 2 2 2 1 FtsX-like permease family Pam17 PF08566.10 ORF41261 - 0.029 14.2 0.3 0.029 14.2 0.3 1.5 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 MacB_PCD PF12704.7 ORF41261 - 0.034 14.5 0.0 0.034 14.5 0.0 2.1 2 1 0 2 2 2 0 MacB-like periplasmic core domain MscL PF01741.18 ORF41261 - 3 8.2 7.2 1.7 9.0 0.8 2.3 1 1 1 2 2 2 0 Large-conductance mechanosensitive channel, MscL CAP PF00188.26 ORF39461 - 0.055 14.3 0.0 0.34 11.7 0.1 2.1 2 0 0 2 2 2 0 Cysteine-rich secretory protein family CTNNBL PF08216.11 ORF39461 - 0.19 11.9 1.8 0.95 9.7 0.2 2.2 2 0 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear Abhydrolase_1 PF00561.20 ORF38393 - 1.8e-19 70.4 0.6 3e-17 63.1 0.6 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF38393 - 1.4e-14 55.2 0.3 1.8e-14 54.9 0.3 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF38393 - 2.8e-14 53.0 0.7 4.8e-10 39.1 0.1 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Thioesterase PF00975.20 ORF38393 - 0.00013 22.1 0.1 0.0002 21.6 0.1 1.6 1 1 0 1 1 1 1 Thioesterase domain FSH1 PF03959.13 ORF38393 - 0.0013 18.4 0.4 0.0025 17.5 0.0 1.7 2 1 0 2 2 2 1 Serine hydrolase (FSH1) Esterase PF00756.20 ORF38393 - 0.0045 16.7 0.1 0.0062 16.2 0.1 1.3 1 0 0 1 1 1 1 Putative esterase DLH PF01738.18 ORF38393 - 0.0082 15.7 0.1 3.5 7.1 0.0 2.1 2 0 0 2 2 2 2 Dienelactone hydrolase family Esterase_phd PF10503.9 ORF38393 - 0.014 14.9 0.2 3.2 7.2 0.1 2.2 2 0 0 2 2 2 0 Esterase PHB depolymerase Abhydrolase_4 PF08386.10 ORF38393 - 0.016 15.3 0.0 0.036 14.2 0.0 1.5 1 0 0 1 1 1 0 TAP-like protein Abhydrolase_3 PF07859.13 ORF38393 - 0.082 12.8 0.1 0.55 10.0 0.1 2.0 2 0 0 2 2 2 0 alpha/beta hydrolase fold Ser_hydrolase PF06821.13 ORF38393 - 0.088 12.7 0.3 0.64 9.9 0.0 2.1 2 0 0 2 2 2 0 Serine hydrolase DUF2048 PF09752.9 ORF38393 - 0.094 11.8 0.1 0.13 11.4 0.1 1.3 1 0 0 1 1 1 0 Abhydrolase domain containing 18 PGAP1 PF07819.13 ORF38393 - 0.1 12.3 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein Baculo_RING PF05883.11 ORF36752 - 0.079 12.9 0.0 0.25 11.3 0.0 1.8 2 0 0 2 2 2 0 Baculovirus U-box/Ring-like domain HflK_N PF12221.8 ORF34796 - 0.13 12.2 1.1 0.32 11.0 1.1 1.6 1 0 0 1 1 1 0 Bacterial membrane protein N terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks56.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks56.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks56.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks56.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Translin PF01997.16 ORF32467 - 1.5e-30 106.7 0.0 1.9e-25 90.0 0.0 2.2 2 0 0 2 2 2 2 Translin family ANTAR PF03861.14 ORF32467 - 0.0054 16.5 0.6 0.0054 16.5 0.6 1.6 2 0 0 2 2 2 1 ANTAR domain adh_short PF00106.25 ORF31217 - 3.9e-38 130.9 0.0 4.8e-38 130.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF31217 - 2.9e-21 76.1 0.0 3.6e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF31217 - 2.2e-07 31.0 0.0 3.4e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF31217 - 0.00016 20.9 0.1 0.00033 19.9 0.0 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF4303 PF14136.6 ORF31217 - 0.0026 17.5 0.0 0.0044 16.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4303) Shikimate_DH PF01488.20 ORF31217 - 0.0036 17.4 0.0 0.25 11.4 0.0 2.3 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF31217 - 0.015 15.5 0.0 0.14 12.5 0.0 2.1 1 1 1 2 2 2 0 Saccharopine dehydrogenase NADP binding domain UDPG_MGDP_dh_N PF03721.14 ORF31217 - 0.036 13.7 0.1 0.06 12.9 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF4038 PF13204.6 ORF31217 - 0.04 13.5 0.1 0.061 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4038) 3HCDH_N PF02737.18 ORF31217 - 0.041 13.8 0.0 0.068 13.1 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyco_tran_WecB PF03808.13 ORF31217 - 0.055 13.4 0.0 0.093 12.7 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family NAD_binding_10 PF13460.6 ORF31217 - 0.069 13.0 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 NAD(P)H-binding Epimerase PF01370.21 ORF31217 - 0.073 12.5 0.0 1.1 8.7 0.0 2.4 1 1 1 2 2 2 0 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 ORF31217 - 0.074 12.1 0.0 0.2 10.7 0.0 1.7 1 1 1 2 2 2 0 RmlD substrate binding domain Pyr_redox_2 PF07992.14 ORF31217 - 0.098 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF3970 PF13113.6 ORF31217 - 0.099 12.9 2.0 0.29 11.4 0.6 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3970) DUF2043 PF09740.9 ORF31134 - 5.6 7.7 10.6 2.7 8.7 3.9 2.7 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2043) Methyltransf_16 PF10294.9 ORF30706 - 0.0026 17.5 0.0 0.0036 17.1 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_23 PF13489.6 ORF30706 - 0.017 14.9 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Mrr_cat PF04471.12 ORF30706 - 0.047 13.7 0.0 0.09 12.8 0.0 1.5 1 0 0 1 1 1 0 Restriction endonuclease PAN_4 PF14295.6 ORF30572 - 0.0049 16.8 0.6 0.0049 16.8 0.6 2.1 2 0 0 2 2 2 1 PAN domain PAN_1 PF00024.26 ORF30572 - 0.0073 16.2 2.2 0.026 14.5 0.2 2.2 2 0 0 2 2 2 1 PAN domain PAN_2 PF08276.11 ORF30572 - 0.11 12.7 0.5 0.11 12.7 0.5 2.1 2 0 0 2 2 2 0 PAN-like domain DUF4116 PF13475.6 ORF2763 - 3.3e-30 103.6 0.0 3e-07 30.1 0.0 6.2 3 2 3 6 6 6 5 Domain of unknown function (DUF4116) DeoC PF01791.9 ORF26175 - 2.9e-16 59.8 0.0 3.7e-16 59.5 0.0 1.2 1 0 0 1 1 1 1 DeoC/LacD family aldolase MFS_1 PF07690.16 ORF25482 - 2.7e-09 36.4 10.3 3.9e-09 35.9 10.3 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF25482 - 1.1 7.5 5.8 0.31 9.3 2.2 1.7 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family NAD_binding_2 PF03446.15 ORF25307 - 3e-37 128.2 0.4 4.8e-37 127.6 0.4 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF25307 - 8.9e-27 93.8 0.9 1.4e-26 93.1 0.9 1.3 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ApbA PF02558.16 ORF25307 - 4.9e-06 26.3 0.0 8.2e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 ORF25307 - 5.6e-06 26.9 0.0 1.3e-05 25.7 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 ORF25307 - 8.5e-05 22.0 0.0 0.00013 21.4 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 ORF25307 - 0.00041 20.3 0.2 0.00079 19.4 0.1 1.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF25307 - 0.00071 19.7 0.0 0.0012 18.9 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 ORF25307 - 0.0032 17.1 0.0 0.0059 16.2 0.0 1.6 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_N PF01210.23 ORF25307 - 0.0042 17.1 0.1 0.012 15.6 0.1 1.8 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TrkA_N PF02254.18 ORF25307 - 0.075 13.3 0.0 0.19 12.0 0.0 1.6 1 1 0 1 1 1 0 TrkA-N domain DUF456 PF04306.13 ORF2223 - 0.0017 18.7 3.8 0.0038 17.5 3.8 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF456) TetR_C_14 PF17754.1 ORF2223 - 0.048 13.6 2.8 0.17 11.9 2.8 1.9 1 0 0 1 1 1 0 MftR C-terminal domain SseC PF04888.12 ORF2223 - 1.6 8.3 9.2 6.3 6.3 2.9 2.1 2 0 0 2 2 2 0 Secretion system effector C (SseC) like family AAA_23 PF13476.6 ORF21678 - 0.17 12.3 4.0 0.31 11.5 4.0 1.5 1 0 0 1 1 1 0 AAA domain DUF1664 PF07889.12 ORF21678 - 0.33 11.0 3.6 0.7 9.9 3.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) FAA_hydro_N_2 PF18288.1 ORF21678 - 0.48 10.9 9.2 0.2 12.1 1.7 2.7 2 1 0 2 2 2 0 Fumarylacetoacetase N-terminal domain 2 XhlA PF10779.9 ORF21678 - 2.9 8.1 5.4 1.7 8.9 2.1 2.3 2 1 1 3 3 3 0 Haemolysin XhlA LAGLIDADG_3 PF14528.6 ORF20787 - 0.0001 22.5 0.1 0.00029 21.1 0.0 1.8 2 0 0 2 2 2 1 LAGLIDADG-like domain LAGLIDADG_1 PF00961.19 ORF20787 - 0.036 15.0 0.4 0.16 13.0 0.0 2.2 2 1 0 2 2 2 0 LAGLIDADG endonuclease DAO PF01266.24 ORF12848 - 7.8e-25 88.2 0.1 1e-24 87.8 0.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase XPC-binding PF09280.11 ORF12848 - 0.057 13.2 0.0 0.095 12.5 0.0 1.3 1 0 0 1 1 1 0 XPC-binding domain RNA_pol_Rpc34 PF05158.12 ORF112585 - 1.2e-36 126.8 4.9 2.1e-32 112.9 2.0 2.0 1 1 1 2 2 2 2 RNA polymerase Rpc34 subunit MarR PF01047.22 ORF112585 - 0.0087 16.0 0.3 0.033 14.1 0.1 2.0 2 0 0 2 2 2 1 MarR family B-block_TFIIIC PF04182.12 ORF112585 - 0.12 12.5 0.4 0.26 11.5 0.2 1.6 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC HemY_N PF07219.13 ORF112015 - 0.0014 18.8 0.0 0.0022 18.2 0.0 1.2 1 0 0 1 1 1 1 HemY protein N-terminus Cadherin_C_2 PF16492.5 ORF112015 - 0.045 14.5 0.0 0.11 13.3 0.0 1.7 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal Comm PF15957.5 ORF112015 - 0.052 13.9 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 Commissureless Beta-lactamase2 PF13354.6 ORF107612 - 1.3e-39 135.9 0.0 1.6e-39 135.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 ORF107612 - 1.4e-30 106.7 0.0 2.7e-30 105.8 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 ORF107612 - 2.3e-06 27.3 0.0 5e-06 26.1 0.0 1.5 1 1 1 2 2 2 1 D-alanyl-D-alanine carboxypeptidase DUF5056 PF16479.5 ORF107244 - 0.024 14.9 0.0 0.024 14.9 0.0 2.9 3 1 1 4 4 4 0 Domain of unknown function (DUF5056) SieB PF14163.6 ORF107244 - 1 8.8 4.5 2.6 7.6 0.0 2.7 2 1 1 3 3 3 0 Super-infection exclusion protein B Biotin_carb_C PF02785.19 ORF107185 - 4.9e-18 65.2 0.0 6.9e-17 61.5 0.0 2.4 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 ORF107185 - 3.1e-17 62.2 6.5 5.9e-17 61.3 6.5 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 ORF107185 - 3.6e-08 33.1 0.5 0.0019 18.0 0.0 2.4 1 1 1 2 2 2 2 Biotin-lipoyl like PCC_BT PF18140.1 ORF107185 - 4.2e-05 23.9 0.0 0.0001 22.6 0.0 1.6 1 0 0 1 1 1 1 Propionyl-coenzyme A carboxylase BT domain RnfC_N PF13375.6 ORF107185 - 0.003 17.5 0.1 0.0048 16.8 0.1 1.4 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain HlyD_3 PF13437.6 ORF107185 - 0.0092 16.7 0.2 0.52 11.1 0.0 2.4 2 0 0 2 2 2 1 HlyD family secretion protein NQRA PF05896.11 ORF107185 - 0.019 14.4 0.6 0.027 13.9 0.6 1.2 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) eIF-1a PF01176.19 ORF107185 - 0.028 14.2 0.0 2.7 7.9 0.0 2.7 2 0 0 2 2 2 0 Translation initiation factor 1A / IF-1 HlyD_D23 PF16576.5 ORF107185 - 0.073 12.3 0.4 1.5 8.0 0.0 2.1 1 1 1 2 2 2 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Phage_tail_T PF06223.12 ORF107185 - 0.26 11.8 1.4 0.73 10.4 1.3 1.8 1 1 0 1 1 1 0 Minor tail protein T PALP PF00291.25 ORF1053 - 1.8e-38 132.6 1.7 2.1e-38 132.4 1.7 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HATPase_c PF02518.26 ORF100501 - 2.1e-21 76.5 0.0 5.4e-21 75.2 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF100501 - 1.5e-14 53.7 4.4 2.6e-14 53.0 3.6 1.8 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 ORF100501 - 3.4e-11 43.4 0.1 2.4e-10 40.6 0.0 2.4 2 0 0 2 2 2 1 HAMP domain HATPase_c_3 PF13589.6 ORF100501 - 3.3e-06 27.0 0.0 6.6e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF100501 - 1.8e-05 24.7 0.0 3.7e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 ORF100501 - 0.023 14.6 0.0 0.12 12.3 0.0 2.0 2 0 0 2 2 2 0 GHKL domain Fibrinogen_BP PF08017.11 NODE_24446_length_853_cov_195.709046_g19027_i0forward_frame_1 - 0.11 10.9 0.0 0.16 10.4 0.0 1.1 1 0 0 1 1 1 0 Fibrinogen binding protein SNARE_assoc PF09335.11 NODE_24422_length_854_cov_3.357753_g19008_i0reverse_frame_1 - 1.7e-18 67.2 5.0 1.7e-18 67.2 5.0 1.8 2 0 0 2 2 2 1 SNARE associated Golgi protein D5_N PF08706.11 NODE_24407_length_854_cov_133.235653_g15798_i1forward_frame_1 - 0.42 10.9 7.0 0.68 10.2 7.0 1.3 1 0 0 1 1 1 0 D5 N terminal like Borrelia_P83 PF05262.11 NODE_24407_length_854_cov_133.235653_g15798_i1forward_frame_1 - 8.4 4.8 24.7 12 4.3 24.7 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein QslA_E PF18226.1 NODE_24333_length_856_cov_2.334957_g18941_i0forward_frame_3 - 0.02 14.8 0.4 0.02 14.8 0.4 1.6 2 0 0 2 2 2 0 LasR-specific antiactivator QslA chain E Mating_N PF12731.7 NODE_24332_length_856_cov_3.935445_g18940_i0reverse_frame_3 - 0.0039 17.3 6.3 0.047 13.8 1.0 2.5 2 0 0 2 2 2 2 Mating-type protein beta 1 NYD-SP28_assoc PF14775.6 NODE_24332_length_856_cov_3.935445_g18940_i0reverse_frame_3 - 0.037 14.1 0.3 0.037 14.1 0.3 2.2 2 0 0 2 2 2 0 Sperm tail C-terminal domain DUF3456 PF11938.8 NODE_24332_length_856_cov_3.935445_g18940_i0reverse_frame_3 - 0.5 10.9 3.1 0.48 10.9 0.3 2.1 2 1 0 2 2 2 0 TLR4 regulator and MIR-interacting MSAP DUF4335 PF14233.6 NODE_24332_length_856_cov_3.935445_g18940_i0forward_frame_2 - 0.14 12.1 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4335) FtsX PF02687.21 NODE_24298_length_857_cov_3.794404_g18912_i0forward_frame_2 - 1.6e-05 25.3 4.1 1.6e-05 25.3 4.1 3.1 2 1 1 3 3 3 1 FtsX-like permease family Nup35_RRM_2 PF14605.6 NODE_24297_length_857_cov_4.784672_g18911_i0reverse_frame_2 - 0.086 12.9 0.1 1 9.4 0.0 2.5 3 0 0 3 3 3 0 Nup53/35/40-type RNA recognition motif ABC_tran PF00005.27 NODE_24297_length_857_cov_4.784672_g18911_i0forward_frame_2 - 7.4e-27 94.5 0.1 3.3e-19 69.8 0.0 2.3 2 0 0 2 2 2 2 ABC transporter DUF1639 PF07797.14 NODE_24278_length_857_cov_350.190998_g18894_i0reverse_frame_2 - 8.9 6.4 10.0 0.41 10.7 0.3 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1639) DUF1911 PF08929.10 NODE_24278_length_857_cov_350.190998_g18894_i0forward_frame_3 - 0.038 14.8 0.0 0.056 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1911) Peptidase_M9_N PF08453.10 NODE_24265_length_858_cov_3.657351_g18883_i0forward_frame_3 - 0.02 14.6 1.6 0.027 14.2 0.1 1.9 2 0 0 2 2 2 0 Peptidase family M9 N-terminal DUF3763 PF12592.8 ORF99382 - 0.012 15.6 0.0 6.1 7.0 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3763) LRR_4 PF12799.7 ORF98484 - 0.016 15.6 1.9 0.016 15.6 1.9 3.6 1 1 3 4 4 4 0 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 ORF98484 - 0.076 13.1 2.7 2.8 8.2 0.1 2.9 2 0 0 2 2 2 0 Leucine Rich repeat DUF1722 PF08349.11 ORF98484 - 0.1 12.9 0.2 17 5.8 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1722) LRR_8 PF13855.6 ORF98484 - 0.33 10.8 8.7 0.7 9.7 3.0 3.3 1 1 2 3 3 3 0 Leucine rich repeat PKI PF02827.16 ORF98484 - 0.81 9.9 4.4 0.96 9.7 1.8 2.5 2 0 0 2 2 2 0 cAMP-dependent protein kinase inhibitor LRR_1 PF00560.33 ORF98484 - 3.2 8.7 6.9 10 7.1 0.3 3.6 3 1 0 3 3 3 0 Leucine Rich Repeat EF-hand_7 PF13499.6 ORF97772 - 6.5e-17 61.8 12.6 5.6e-09 36.3 3.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF97772 - 7.9e-14 50.3 15.4 6.3e-05 22.6 0.6 5.1 4 1 0 4 4 4 4 EF-hand domain EF-hand_1 PF00036.32 ORF97772 - 2.5e-13 48.5 19.9 3.5e-07 29.3 0.9 5.8 4 1 1 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF97772 - 1e-09 38.1 14.7 1.6e-08 34.2 2.9 4.1 3 1 1 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF97772 - 1.6e-05 24.2 13.8 0.0021 17.4 0.4 5.0 4 0 0 4 4 4 3 EF hand DUF2624 PF11116.8 ORF97772 - 0.04 14.8 0.1 0.23 12.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2624) Excalibur PF05901.11 ORF97772 - 0.14 12.8 1.5 18 6.0 0.0 3.1 3 0 0 3 3 3 0 Excalibur calcium-binding domain EF-hand_9 PF14658.6 ORF97772 - 0.2 12.0 5.6 13 6.2 0.3 3.7 3 1 1 4 4 4 0 EF-hand domain EF-hand_4 PF12763.7 ORF97772 - 2.5 8.1 8.5 1.2 9.1 1.0 3.6 2 1 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand Aminotran_1_2 PF00155.21 ORF97385 - 4.2e-30 105.1 0.0 4.7e-30 105.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 ORF97385 - 4.6e-06 25.7 0.0 1.2e-05 24.3 0.0 1.7 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase Nucleotid_trans PF03407.16 ORF96688 - 0.056 13.4 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 Nucleotide-diphospho-sugar transferase Exostosin PF03016.15 ORF9545 - 6.7e-17 61.6 0.0 8.4e-17 61.3 0.0 1.1 1 0 0 1 1 1 1 Exostosin family Ank_4 PF13637.6 ORF93015 - 0.0045 17.5 0.1 0.0082 16.7 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF93015 - 0.025 15.1 0.0 0.041 14.5 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF93015 - 0.072 13.4 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Josephin PF02099.17 ORF91724 - 0.14 12.2 1.3 0.33 11.1 0.1 2.1 2 1 1 3 3 3 0 Josephin Radial_spoke PF04712.12 ORF91428 - 4.9e-16 58.8 0.5 1.8e-08 33.8 0.2 2.2 1 1 0 2 2 2 2 Radial spokehead-like protein RNA_pol_Rpc82 PF05645.13 ORF85641 - 0.00054 19.8 1.3 0.054 13.2 0.0 2.5 1 1 1 2 2 2 2 RNA polymerase III subunit RPC82 DUF668 PF05003.12 ORF85641 - 0.11 13.0 0.2 3.3 8.3 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF668) RPW8 PF05659.11 ORF79107 - 1.9 8.2 7.9 0.42 10.3 4.6 1.8 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Presenilin PF01080.17 ORF79107 - 6.1 5.5 5.9 8.1 5.1 5.9 1.1 1 0 0 1 1 1 0 Presenilin HEPN_AbiA_CTD PF18732.1 ORF79107 - 7.4 6.5 13.9 4.8 7.1 10.8 2.1 1 1 1 2 2 2 0 HEPN like, Abia C-terminal domain Pentapeptide_4 PF13599.6 ORF77568 - 0.015 15.4 2.8 0.046 13.9 2.7 1.8 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) CSN8_PSD8_EIF3K PF10075.9 ORF77568 - 0.1 12.6 3.3 0.31 11.0 0.1 2.8 2 1 1 3 3 3 0 CSN8/PSMD8/EIF3K family Lipase_3 PF01764.25 ORF7265 - 2.6e-27 95.5 0.0 3.4e-27 95.0 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 ORF7265 - 0.0012 18.4 0.1 0.017 14.7 0.1 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_6 PF12697.7 ORF7265 - 0.021 15.5 0.2 0.034 14.8 0.1 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family ER_lumen_recept PF00810.18 ORF72484 - 3.2e-30 105.9 1.0 3.2e-30 105.9 1.0 1.9 2 0 0 2 2 2 1 ER lumen protein retaining receptor AA_permease_2 PF13520.6 ORF72484 - 0.0022 16.9 4.3 0.0044 15.9 4.3 1.5 1 0 0 1 1 1 1 Amino acid permease FA_hydroxylase PF04116.13 ORF72358 - 4.9e-14 52.8 22.1 7.2e-14 52.3 22.1 1.3 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily Helicase_C PF00271.31 ORF68354 - 2.9e-19 69.4 0.0 4.6e-19 68.8 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain baeRF_family2 PF18844.1 ORF68354 - 0.076 13.1 0.1 0.15 12.1 0.1 1.5 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 Nucleo_P87 PF07267.11 ORF64364 - 1.2 7.9 9.6 1.7 7.4 9.6 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Acyl-CoA_dh_1 PF00441.24 ORF60345 - 2.5e-34 118.7 0.1 3.4e-34 118.2 0.1 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF60345 - 3.2e-19 68.9 0.1 5e-19 68.3 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 ORF60345 - 1.4e-05 25.4 0.0 2.1e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain YabA PF06156.13 ORF60040 - 0.14 12.8 22.6 0.096 13.3 2.5 3.6 2 2 2 4 4 4 0 Initiation control protein YabA DUF2203 PF09969.9 ORF60040 - 0.22 12.3 9.9 2.7 8.7 0.3 3.2 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) Csm1_N PF18504.1 ORF60040 - 0.26 11.7 0.1 0.26 11.7 0.1 4.7 5 1 0 5 5 5 0 Csm1 N-terminal domain ABC_tran_CTD PF16326.5 ORF60040 - 2.2 8.6 14.9 0.92 9.8 1.0 3.8 2 1 0 3 3 3 0 ABC transporter C-terminal domain Thioesterase PF00975.20 ORF60040 - 2.8 8.0 7.2 0.66 10.0 2.0 2.1 1 1 1 2 2 2 0 Thioesterase domain PKcGMP_CC PF16808.5 ORF60040 - 4.9 7.1 17.3 0.25 11.2 1.3 3.6 4 0 0 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Lectin_N PF03954.14 ORF60040 - 7.4 6.3 12.9 9.4 6.0 2.6 3.5 2 1 1 3 3 3 0 Hepatic lectin, N-terminal domain DUF4140 PF13600.6 ORF60040 - 8.6 6.9 11.7 2.1 8.9 1.8 3.2 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) HalX PF08663.10 ORF60040 - 8.9 6.7 13.5 58 4.1 6.6 3.4 2 1 0 2 2 2 0 HalX domain DnaJ PF00226.31 ORF56270 - 6.8e-18 64.6 0.0 1.4e-17 63.6 0.0 1.6 1 0 0 1 1 1 1 DnaJ domain Usp PF00582.26 ORF55778 - 1.1e-13 51.9 0.0 6.6e-10 39.6 0.0 2.3 2 0 0 2 2 2 2 Universal stress protein family EAF PF09816.9 ORF55778 - 0.051 14.0 0.0 0.11 13.0 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase II transcription elongation factor DUF2016 PF09436.10 ORF55778 - 0.18 11.7 0.0 0.34 10.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) Pro_isomerase PF00160.21 ORF51194 - 1.9e-37 129.0 0.0 2.8e-37 128.4 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TPR_1 PF00515.28 ORF51194 - 1.8e-08 33.8 2.2 0.00015 21.4 0.2 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF51194 - 3e-07 30.5 3.0 4.8e-07 29.8 3.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF51194 - 2.3e-06 27.2 0.3 0.025 14.3 0.4 2.8 1 1 1 2 2 2 2 TPR repeat TPR_2 PF07719.17 ORF51194 - 0.0002 21.2 5.4 0.00037 20.4 0.6 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF51194 - 0.00039 20.4 0.1 0.098 12.9 0.0 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 ORF51194 - 0.0044 16.3 2.3 0.0066 15.7 2.3 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF51194 - 0.0051 17.1 0.4 0.5 10.9 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat Rho_Binding PF08912.11 ORF51194 - 0.013 16.3 2.5 0.55 11.1 0.1 2.4 2 0 0 2 2 2 0 Rho Binding TPR_16 PF13432.6 ORF51194 - 0.017 15.7 5.7 0.11 13.2 5.7 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF51194 - 0.026 15.1 0.4 0.093 13.4 0.4 2.0 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF51194 - 0.15 12.9 4.8 0.21 12.5 1.8 2.7 1 1 1 2 2 2 0 Tetratricopeptide repeat CHD5 PF04420.14 ORF51194 - 0.18 11.7 0.0 0.34 10.7 0.0 1.4 1 0 0 1 1 1 0 CHD5-like protein TPR_12 PF13424.6 ORF51194 - 0.3 11.4 5.7 1.5 9.1 5.7 2.1 1 1 0 1 1 1 0 Tetratricopeptide repeat ECH_1 PF00378.20 ORF46359 - 3.3e-81 272.3 0.1 4.1e-81 272.0 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF46359 - 3.3e-35 122.1 2.2 1.5e-31 110.2 0.3 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase DUF2313 PF10076.9 ORF46359 - 0.0089 15.9 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein conserved in bacteria (DUF2313) FA_hydroxylase PF04116.13 ORF45917 - 4.9e-14 52.8 22.1 7.2e-14 52.3 22.1 1.3 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily 60KD_IMP PF02096.20 ORF45468 - 9.2e-24 84.2 1.3 1.1e-23 83.9 1.3 1.1 1 0 0 1 1 1 1 60Kd inner membrane protein Bac_rhamnosid6H PF17389.2 ORF44104 - 2.6e-22 79.5 0.2 3e-22 79.3 0.2 1.1 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Bac_rhamnosid_C PF17390.2 ORF44104 - 2.3e-05 24.1 0.1 4.9e-05 23.0 0.1 1.5 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase C-terminal domain Radial_spoke PF04712.12 ORF41652 - 2.3e-17 63.1 0.1 1.2e-06 27.7 0.1 3.2 3 0 0 3 3 3 3 Radial spokehead-like protein Aa_trans PF01490.18 ORF41287 - 9.9e-16 57.4 6.1 1.4e-15 56.9 6.1 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein STAT6_C PF14596.6 ORF41056 - 0.12 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 STAT6 C-terminal NABP PF07990.12 ORF39538 - 0.025 14.1 5.4 0.03 13.9 5.4 1.1 1 0 0 1 1 1 0 Nucleic acid binding protein NABP DASH_Dad3 PF08656.10 ORF39538 - 0.066 13.3 4.6 0.35 11.0 0.4 2.8 2 1 0 2 2 2 0 DASH complex subunit Dad3 Spectrin PF00435.21 ORF39538 - 0.22 12.0 0.3 0.22 12.0 0.3 2.8 3 1 0 3 3 3 0 Spectrin repeat DUF724 PF05266.14 ORF39538 - 0.25 11.2 15.3 0.066 13.0 6.5 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF724) DUF4337 PF14235.6 ORF39538 - 0.58 10.3 2.3 4.2 7.5 0.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) SLATT_fungal PF18142.1 ORF39538 - 0.97 9.4 4.0 1.1 9.3 0.7 2.2 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain Prefoldin_2 PF01920.20 ORF39538 - 1 9.4 17.1 1.1 9.3 2.5 3.5 3 0 0 3 3 3 0 Prefoldin subunit CorA PF01544.18 ORF39538 - 2.6 7.3 7.7 0.84 8.9 0.8 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DASH_Dam1 PF08653.10 ORF39538 - 7.2 6.5 8.6 7.9 6.4 0.1 3.6 4 0 0 4 4 4 0 DASH complex subunit Dam1 Sel1 PF08238.12 ORF36682 - 9.8e-10 38.8 0.2 0.005 17.5 0.0 3.9 3 1 0 3 3 3 2 Sel1 repeat SUKH-4 PF14435.6 ORF35434 - 0.052 13.6 2.4 0.053 13.6 0.3 2.0 1 1 1 2 2 2 0 SUKH-4 immunity protein IGR PF09597.10 ORF35434 - 0.068 13.3 0.0 0.22 11.6 0.0 1.8 2 0 0 2 2 2 0 IGR protein motif Chloroa_b-bind PF00504.21 ORF34959 - 3.6e-25 89.4 0.8 5e-25 88.9 0.8 1.2 1 0 0 1 1 1 1 Chlorophyll A-B binding protein STAT6_C PF14596.6 ORF33195 - 0.12 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 STAT6 C-terminal TMEM43 PF07787.12 ORF32847 - 6.9e-19 68.2 0.0 1.1e-18 67.6 0.0 1.3 1 1 0 1 1 1 1 Transmembrane protein 43 STI1 PF17830.1 ORF32531 - 1.2e-14 53.9 1.2 4.6e-08 32.9 0.0 2.9 3 0 0 3 3 3 2 STI1 domain HECW1_helix PF18436.1 ORF32531 - 0.015 15.4 0.0 0.042 14.0 0.0 1.8 1 0 0 1 1 1 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 Ins_allergen_rp PF06757.13 ORF32531 - 0.039 13.9 1.2 2.8 7.9 0.0 2.8 3 1 1 4 4 4 0 Insect allergen related repeat, nitrile-specifier detoxification eIF3_N PF09440.10 ORF32531 - 2.3 8.7 9.1 0.58 10.6 0.7 3.1 2 1 1 3 3 3 0 eIF3 subunit 6 N terminal domain FHA PF00498.26 ORF27996 - 6.6e-15 55.2 0.0 1e-14 54.6 0.0 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF27996 - 0.00045 20.5 0.0 0.0013 19.0 0.0 1.7 1 1 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain NDK PF00334.19 ORF27675 - 6.9e-36 123.2 0.0 7.4e-32 110.2 0.0 2.2 2 0 0 2 2 2 2 Nucleoside diphosphate kinase Chorion_S16 PF05836.12 ORF25195 - 3.7 7.8 5.9 18 5.6 0.7 2.2 1 1 1 2 2 2 0 Chorion protein S16 Rox3 PF08633.10 ORF22187 - 0.014 15.7 1.5 0.021 15.1 1.5 1.2 1 0 0 1 1 1 0 Rox3 mediator complex subunit Nucleo_P87 PF07267.11 ORF22187 - 3.3 6.5 4.4 4.5 6.0 4.4 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 NKWYS PF10364.9 ORF20254 - 9.4e-16 58.2 0.3 1.5e-15 57.6 0.3 1.3 1 0 0 1 1 1 1 Putative capsular polysaccharide synthesis protein Aa_trans PF01490.18 ORF1783 - 9.9e-16 57.4 6.1 1.4e-15 56.9 6.1 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Peptidase_S49_N PF08496.10 ORF15376 - 0.049 13.7 0.3 0.8 9.8 0.1 2.5 2 1 0 2 2 2 0 Peptidase family S49 N-terminal FAD_binding_7 PF03441.14 ORF11517 - 3.9e-43 147.3 1.0 4.9e-43 147.0 1.0 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase ABC_export PF16962.5 ORF111800 - 0.092 11.2 2.0 0.26 9.7 0.4 1.9 2 0 0 2 2 2 0 Putative ABC exporter FAD_binding_1 PF00667.20 ORF11084 - 0.059 12.9 0.0 0.093 12.3 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain TSP_1 PF00090.19 ORF110262 - 1.1e-22 80.0 27.0 6.1e-09 36.0 3.2 4.5 4 0 0 4 4 4 4 Thrombospondin type 1 domain Polyoma_lg_T_C PF06431.11 ORF110262 - 0.21 10.4 0.0 0.28 10.0 0.0 1.1 1 0 0 1 1 1 0 Polyomavirus large T antigen C-terminus RicinB_lectin_2 PF14200.6 ORF106266 - 4.5e-06 27.3 0.0 5.9e-05 23.7 0.0 2.4 1 1 1 2 2 2 1 Ricin-type beta-trefoil lectin domain-like HlyD_D23 PF16576.5 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 1.3e-15 57.2 7.3 6.1e-14 51.7 7.2 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 2.4e-15 57.1 3.9 2.3e-12 47.6 0.2 2.3 2 0 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 3.4e-14 52.4 1.0 1.3e-09 37.7 0.4 2.8 2 0 0 2 2 2 2 Biotin-lipoyl like HlyD PF00529.20 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 3.2e-08 33.3 0.3 1.1e-07 31.6 0.3 2.0 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 4.4e-05 23.2 0.1 0.14 12.0 0.0 2.6 2 0 0 2 2 2 2 Biotin-requiring enzyme Membrane_bind PF14564.6 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 0.038 14.4 0.3 0.088 13.3 0.2 1.6 1 1 0 1 1 1 0 Membrane binding PepSY_TM PF03929.16 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 0.076 12.7 0.7 0.13 12.0 0.6 1.5 1 1 0 1 1 1 0 PepSY-associated TM region YpmT PF17431.2 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 0.16 12.0 0.4 0.3 11.1 0.4 1.4 1 0 0 1 1 1 0 Uncharacterized YmpT-like TP_methylase PF00590.20 NODE_24588_length_850_cov_3.046626_g19154_i0reverse_frame_1 - 2.1e-21 76.9 0.2 2.7e-21 76.5 0.2 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CD225 PF04505.12 NODE_24550_length_850_cov_1232.582822_g19118_i0forward_frame_1 - 7.5 6.8 8.7 0.58 10.3 0.2 2.9 3 0 0 3 3 3 0 Interferon-induced transmembrane protein ACR_tran PF00873.19 NODE_24505_length_852_cov_3.085679_g19078_i0reverse_frame_1 - 2.2e-73 247.5 0.2 2.4e-73 247.4 0.2 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family DB PF01682.19 NODE_24467_length_853_cov_3.531785_g19047_i0forward_frame_3 - 6.7 7.1 10.1 55 4.2 5.7 2.5 1 1 1 2 2 2 0 DB module Hydrolase_3 PF08282.12 NODE_24467_length_853_cov_3.531785_g19047_i0forward_frame_2 - 1.9e-50 172.0 0.0 2.1e-50 171.8 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 NODE_24467_length_853_cov_3.531785_g19047_i0forward_frame_2 - 1.3e-17 64.1 0.0 2.1e-10 40.5 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 NODE_24467_length_853_cov_3.531785_g19047_i0forward_frame_2 - 5.9e-06 26.7 0.0 0.00014 22.2 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 NODE_24467_length_853_cov_3.531785_g19047_i0forward_frame_2 - 0.012 16.0 0.1 3.6 8.0 0.0 2.4 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.16 NODE_24467_length_853_cov_3.531785_g19047_i0forward_frame_2 - 0.1 11.7 0.0 0.52 9.4 0.0 1.8 2 0 0 2 2 2 0 Trehalose-phosphatase NusG_add PF18298.1 NODE_24458_length_853_cov_94.502445_g19038_i0reverse_frame_2 - 0.038 14.2 1.9 0.75 10.0 0.5 2.3 2 0 0 2 2 2 0 NusG additional domain MLANA PF14991.6 NODE_24453_length_853_cov_141.006112_g19034_i0reverse_frame_3 - 0.024 14.9 0.9 0.04 14.2 0.1 1.9 2 0 0 2 2 2 0 Protein melan-A Shisa PF13908.6 NODE_24453_length_853_cov_141.006112_g19034_i0reverse_frame_3 - 0.045 14.0 0.1 0.069 13.4 0.1 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator TMIE PF16038.5 NODE_24453_length_853_cov_141.006112_g19034_i0reverse_frame_3 - 0.055 13.3 0.8 0.4 10.5 0.4 2.5 2 0 0 2 2 2 0 TMIE protein Wzy_C PF04932.15 NODE_24452_length_853_cov_142.224939_g19033_i0forward_frame_2 - 1.1 8.9 9.7 1.9 8.1 9.7 1.5 1 0 0 1 1 1 0 O-Antigen ligase Cys_Met_Meta_PP PF01053.20 NODE_24422_length_854_cov_3.357753_g19008_i0reverse_frame_3 - 0.00052 18.7 0.5 0.00078 18.1 0.5 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme FTCD PF02971.14 NODE_24407_length_854_cov_133.235653_g15798_i1forward_frame_2 - 0.13 12.3 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Formiminotransferase domain MatE PF01554.18 ORF97972 - 2.7e-21 75.9 9.2 5.1e-21 75.0 9.2 1.4 1 0 0 1 1 1 1 MatE MurJ PF03023.14 ORF97972 - 0.00095 17.9 7.4 0.0016 17.2 7.4 1.4 1 0 0 1 1 1 1 Lipid II flippase MurJ DmsC PF04976.12 ORF97674 - 9.9e-116 386.0 19.9 1.1e-115 385.9 19.9 1.0 1 0 0 1 1 1 1 DMSO reductase anchor subunit (DmsC) Herpes_TK PF00693.18 ORF97674 - 0.11 11.8 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 Thymidine kinase from herpesvirus Mito_carr PF00153.27 ORF94198 - 8e-25 86.6 4.9 8.6e-18 64.1 0.3 4.0 3 1 1 4 4 4 3 Mitochondrial carrier protein Endonuclease_5 PF04493.14 ORF89619 - 8.4e-37 126.8 0.0 1.3e-36 126.2 0.0 1.3 1 0 0 1 1 1 1 Endonuclease V DUF99 PF01949.16 ORF89619 - 0.0084 15.5 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF99 Metal_resist PF13801.6 ORF89619 - 0.013 15.7 4.2 1.6 8.9 1.2 3.0 2 1 0 3 3 3 0 Heavy-metal resistance PAS_5 PF07310.13 ORF89619 - 0.045 13.5 0.0 0.086 12.6 0.0 1.4 1 0 0 1 1 1 0 PAS domain MatE PF01554.18 ORF87764 - 4.5e-21 75.2 9.4 8.7e-21 74.3 9.4 1.5 1 0 0 1 1 1 1 MatE MurJ PF03023.14 ORF87764 - 0.00097 17.8 7.4 0.0016 17.2 7.4 1.4 1 0 0 1 1 1 1 Lipid II flippase MurJ DUF4572 PF15139.6 ORF87356 - 7.6e-05 22.7 0.1 0.0016 18.4 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4572) CxC7 PF18866.1 ORF85073 - 0.0013 18.8 0.1 0.019 15.1 0.0 2.7 3 0 0 3 3 3 1 CxC7 like cysteine cluster associated with KDZ transposases CppA_C PF14507.6 ORF8380 - 0.063 14.0 0.2 11 6.8 0.0 3.0 3 0 0 3 3 3 0 CppA C-terminal TFIIS_M PF07500.14 ORF82971 - 1.1e-24 87.0 2.4 2.2e-24 86.1 2.4 1.5 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain TFIIS_C PF01096.18 ORF82971 - 2.1e-19 69.1 5.0 3.7e-19 68.3 5.0 1.4 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS) PI3Ka PF00613.20 ORF79913 - 0.028 13.8 0.0 0.045 13.2 0.0 1.4 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) Sec23_helical PF04815.15 ORF79913 - 0.083 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Sec23/Sec24 helical domain PH_TFIIH PF08567.11 ORF79913 - 0.13 12.6 0.1 0.23 11.8 0.1 1.5 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain FHA PF00498.26 ORF76217 - 0.0015 18.9 0.0 0.0023 18.3 0.0 1.3 1 0 0 1 1 1 1 FHA domain SDA1 PF05285.12 ORF76217 - 0.009 15.5 41.6 0.009 15.5 41.6 2.0 2 0 0 2 2 2 1 SDA1 SID-1_RNA_chan PF13965.6 ORF76217 - 0.81 8.0 2.8 0.85 8.0 2.8 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 ARL2_Bind_BART PF11527.8 ORF75555 - 0.0091 16.1 4.7 1.5 8.9 0.1 3.3 3 0 0 3 3 3 2 The ARF-like 2 binding protein BART ING PF12998.7 ORF75555 - 0.35 11.5 7.9 6.3 7.4 0.4 3.6 2 1 0 3 3 3 0 Inhibitor of growth proteins N-terminal histone-binding CDP-OH_P_transf PF01066.21 ORF73295 - 5.5e-15 55.9 0.2 5.5e-15 55.9 0.2 2.5 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase STIMATE PF12400.8 ORF73295 - 0.083 13.4 2.9 0.092 13.3 0.1 2.3 1 1 1 2 2 2 0 STIMATE family peroxidase PF00141.23 ORF7318 - 1e-28 100.6 0.0 1.5e-28 100.0 0.0 1.3 1 0 0 1 1 1 1 Peroxidase LRAT PF04970.13 ORF72980 - 1.3e-05 25.5 0.0 2.1e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Lecithin retinol acyltransferase 7TM_GPCR_Srd PF10317.9 ORF72980 - 0.074 12.2 4.9 0.11 11.7 4.9 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd IclR PF01614.18 ORF70087 - 1.8e-21 76.3 0.6 4.7e-21 75.0 0.1 2.0 2 0 0 2 2 2 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 ORF70087 - 1.6e-07 31.0 3.4 4.1e-07 29.7 0.2 2.9 3 0 0 3 3 3 1 IclR helix-turn-helix domain MarR_2 PF12802.7 ORF70087 - 0.052 13.4 0.0 0.13 12.2 0.0 1.7 1 0 0 1 1 1 0 MarR family RQC PF09382.10 ORF70087 - 0.068 13.0 0.1 0.17 11.6 0.0 1.7 2 0 0 2 2 2 0 RQC domain TPR_1 PF00515.28 ORF68539 - 3.1e-07 29.9 9.9 0.00017 21.3 1.3 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF68539 - 3.8e-07 30.3 5.3 0.0033 17.7 0.2 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF68539 - 5.3e-06 26.1 9.1 0.0014 18.6 0.7 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF68539 - 4.8e-05 23.1 3.2 0.0098 15.9 0.2 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF68539 - 0.0012 19.5 0.1 0.28 12.1 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF68539 - 0.0016 18.9 1.1 0.8 10.5 0.1 3.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF68539 - 0.0036 17.4 1.3 0.0036 17.4 1.3 3.8 5 0 0 5 5 4 2 Tetratricopeptide repeat DUF4449 PF14613.6 ORF68539 - 0.016 15.3 0.6 0.044 13.9 0.6 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) TPR_10 PF13374.6 ORF68539 - 0.058 13.3 2.8 0.27 11.2 0.1 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat SPO22 PF08631.10 ORF68539 - 0.11 12.0 1.5 0.2 11.1 0.4 1.8 2 0 0 2 2 2 0 Meiosis protein SPO22/ZIP4 like Mad3_BUB1_I PF08311.12 ORF68539 - 0.26 11.3 4.5 2.7 8.0 0.1 3.1 2 1 0 2 2 2 0 Mad3/BUB1 homology region 1 DUF5630 PF18632.1 ORF68539 - 0.63 9.3 5.9 1.6 8.0 0.9 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5630) ArgJ PF01960.18 ORF67808 - 4.1e-84 282.5 1.5 4.4e-84 282.4 1.5 1.0 1 0 0 1 1 1 1 ArgJ family KH_4 PF13083.6 ORF67808 - 0.14 12.0 0.3 0.56 10.1 0.1 2.0 2 0 0 2 2 2 0 KH domain Peptidase_C1 PF00112.23 ORF61781 - 2.7e-43 148.6 7.1 4.4e-26 92.3 1.1 2.1 2 0 0 2 2 2 2 Papain family cysteine protease DUF1694 PF07997.11 ORF56712 - 0.089 12.9 0.4 0.34 11.0 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1694) MatE PF01554.18 ORF55151 - 2.7e-21 75.9 9.2 5.1e-21 75.0 9.2 1.4 1 0 0 1 1 1 1 MatE MurJ PF03023.14 ORF55151 - 0.00095 17.9 7.4 0.0016 17.2 7.4 1.4 1 0 0 1 1 1 1 Lipid II flippase MurJ PI3Ka PF00613.20 ORF54828 - 0.028 13.8 0.0 0.045 13.2 0.0 1.4 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) Sec23_helical PF04815.15 ORF54828 - 0.083 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Sec23/Sec24 helical domain PH_TFIIH PF08567.11 ORF54828 - 0.13 12.6 0.1 0.23 11.8 0.1 1.5 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain RRM_2 PF04059.12 ORF54378 - 6.1e-20 71.2 0.0 9.9e-20 70.6 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF54378 - 0.047 13.5 0.0 0.092 12.6 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RicinB_lectin_2 PF14200.6 ORF53570 - 0.15 12.8 0.0 0.3 11.8 0.0 1.4 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin domain-like ABC2_membrane_3 PF12698.7 ORF53153 - 1.5e-30 106.5 7.5 1.8e-30 106.2 7.5 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 ORF53153 - 2.2e-19 69.7 10.2 3.3e-19 69.2 10.2 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 ORF53153 - 1.7e-17 63.6 9.3 2.3e-17 63.2 9.3 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 ORF53153 - 0.00094 19.2 9.9 0.00094 19.2 9.9 1.4 2 0 0 2 2 2 1 ABC-2 family transporter protein SIP1 PF04938.12 ORF52366 - 1.4e-22 80.5 0.0 1.9e-22 80.1 0.0 1.1 1 0 0 1 1 1 1 Survival motor neuron (SMN) interacting protein 1 (SIP1) DUF4525 PF15027.6 ORF51599 - 0.14 11.9 0.2 0.29 10.9 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) HTH_Tnp_Tc5 PF03221.16 ORF51599 - 6.5 6.9 8.5 2.8 8.0 3.3 2.7 2 1 0 2 2 2 0 Tc5 transposase DNA-binding domain SIS PF01380.22 ORF49122 - 1.6e-36 125.0 0.1 7.4e-36 122.9 0.0 1.9 2 0 0 2 2 2 1 SIS domain CBS PF00571.28 ORF49122 - 7.3e-13 48.8 4.8 1.7e-05 25.2 0.3 3.1 3 0 0 3 3 3 2 CBS domain SIS_2 PF13580.6 ORF49122 - 0.016 15.2 0.8 0.079 13.0 0.0 2.2 1 1 1 2 2 2 0 SIS domain DUF2529 PF10740.9 ORF49122 - 0.023 14.4 0.0 0.037 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) ATP_bind_2 PF03668.15 ORF49107 - 2.5e-147 489.6 0.0 2.8e-147 489.5 0.0 1.0 1 0 0 1 1 1 1 P-loop ATPase protein family AAA_18 PF13238.6 ORF49107 - 0.028 15.0 0.0 0.44 11.1 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_28 PF13521.6 ORF49107 - 0.029 14.6 0.0 0.039 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain CPT PF07931.12 ORF49107 - 0.054 13.3 0.0 1.6 8.5 0.0 2.2 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_16 PF13191.6 ORF49107 - 0.071 13.5 0.1 0.17 12.3 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain FtsK_SpoIIIE PF01580.18 ORF49107 - 0.1 11.9 1.2 0.13 11.6 0.2 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family Zeta_toxin PF06414.12 ORF49107 - 0.14 11.4 0.0 0.26 10.5 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.6 ORF49107 - 0.14 12.3 0.0 0.49 10.6 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF49107 - 0.16 12.3 0.1 0.34 11.2 0.1 1.9 1 1 0 1 1 1 0 AAA domain WW PF00397.26 ORF48251 - 2.5e-61 203.4 50.5 4.3e-14 52.3 3.0 6.1 6 0 0 6 6 6 6 WW domain Mustang PF15682.5 ORF48251 - 3.5e-07 30.2 11.5 2 8.6 0.1 5.2 5 0 0 5 5 5 4 Musculoskeletal, temporally activated-embryonic nuclear protein 1 Iron_transport PF10634.9 ORF48251 - 0.047 13.9 0.9 75 3.5 0.0 3.8 4 0 0 4 4 4 0 Fe2+ transport protein RtxA PF07634.11 ORF48251 - 0.05 14.1 1.5 1.1e+02 3.7 0.0 4.8 5 0 0 5 5 5 0 RtxA repeat Arm-DNA-bind_1 PF09003.10 ORF48251 - 0.2 11.8 2.6 23 5.2 0.0 3.6 4 0 0 4 4 4 0 Bacteriophage lambda integrase, Arm DNA-binding domain Helicase_C PF00271.31 ORF47384 - 2.3e-20 73.0 0.0 3.9e-20 72.3 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF47384 - 0.017 14.4 0.0 0.024 13.8 0.0 1.3 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase DnaB_bind PF10410.9 ORF47384 - 0.043 14.0 0.1 0.99 9.6 0.0 2.7 2 0 0 2 2 2 0 DnaB-helicase binding domain of primase CAP PF00188.26 ORF46912 - 1.4e-05 25.9 0.0 3.8e-05 24.5 0.0 1.7 2 0 0 2 2 2 1 Cysteine-rich secretory protein family Thiolase_C PF02803.18 ORF46333 - 6.8e-37 125.9 0.1 1.2e-36 125.1 0.1 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain Thiolase_N PF00108.23 ORF46333 - 2.2e-33 115.7 0.0 3.4e-33 115.1 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain SKA2 PF16740.5 ORF44262 - 1 9.1 13.3 3.7 7.4 0.9 4.2 2 1 1 4 4 4 0 Spindle and kinetochore-associated protein 2 HALZ PF02183.18 ORF44262 - 1.6 9.1 8.6 0.21 11.8 0.6 3.2 3 0 0 3 3 3 0 Homeobox associated leucine zipper Abhydrolase_3 PF07859.13 ORF39978 - 1.3e-09 38.3 0.1 2.5e-05 24.2 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold COesterase PF00135.28 ORF39978 - 9.7e-08 31.3 0.0 2e-07 30.3 0.0 1.4 1 1 0 1 1 1 1 Carboxylesterase family Abhydrolase_1 PF00561.20 ORF39978 - 5.6e-07 29.5 0.0 0.0034 17.1 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 ORF39978 - 6.9e-07 28.9 0.1 0.00028 20.4 0.0 2.9 2 1 0 2 2 2 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF39978 - 3.8e-06 26.3 0.4 0.012 14.9 0.3 2.3 1 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF39978 - 5.8e-05 23.8 1.9 0.002 18.8 1.9 2.2 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 ORF39978 - 6e-05 22.9 0.0 0.14 11.9 0.0 2.7 3 0 0 3 3 3 2 Phospholipase/Carboxylesterase Esterase_phd PF10503.9 ORF39978 - 0.006 16.1 3.1 0.048 13.1 3.1 2.3 1 1 0 1 1 1 1 Esterase PHB depolymerase Peptidase_S15 PF02129.18 ORF39978 - 0.082 12.5 0.0 11 5.5 0.0 2.1 2 0 0 2 2 2 0 X-Pro dipeptidyl-peptidase (S15 family) Cons_hypoth95 PF03602.15 ORF27121 - 7e-19 68.2 0.1 2.4e-15 56.7 0.1 2.6 2 1 0 3 3 3 2 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 ORF27121 - 0.0022 18.7 0.2 0.072 13.8 0.2 2.3 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF27121 - 0.03 14.1 0.1 0.79 9.5 0.1 2.1 1 1 1 2 2 2 0 Methyltransferase domain MTS PF05175.14 ORF27121 - 0.18 11.3 0.0 0.28 10.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Esterase PF00756.20 ORF26280 - 6.2e-08 32.6 0.3 1.2e-07 31.7 0.3 1.5 1 1 0 1 1 1 1 Putative esterase CBM53 PF16760.5 ORF26280 - 9.2e-08 32.6 0.0 1.7e-07 31.7 0.0 1.4 1 0 0 1 1 1 1 Starch/carbohydrate-binding module (family 53) Hydrolase_4 PF12146.8 ORF26280 - 0.015 14.6 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Tannase PF07519.11 ORF26280 - 0.18 10.7 0.1 0.23 10.3 0.1 1.1 1 0 0 1 1 1 0 Tannase and feruloyl esterase eIF3_subunit PF08597.10 ORF18783 - 7.7e-13 48.9 41.5 9e-13 48.7 41.5 1.1 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit MAP7 PF05672.11 ORF18783 - 0.45 10.2 39.1 0.32 10.7 28.0 2.3 2 0 0 2 2 2 0 MAP7 (E-MAP-115) family ATP-grasp_2 PF08442.10 ORF18682 - 1.9e-27 96.2 0.4 4.1e-27 95.1 0.0 1.7 2 0 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 ORF18682 - 3.6e-16 59.3 0.2 6e-16 58.6 0.2 1.4 1 0 0 1 1 1 1 CoA-ligase Cation_ATPase_N PF00690.26 ORF18682 - 0.14 11.9 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Cation transporter/ATPase, N-terminus AP_endonuc_2 PF01261.24 ORF16642 - 4.2e-33 114.6 0.0 6e-33 114.1 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel PRMT5_TIM PF17285.2 ORF16642 - 0.017 14.3 0.0 0.02 14.1 0.0 1.1 1 0 0 1 1 1 0 PRMT5 TIM barrel domain Rhabdo_NV PF02484.15 ORF16642 - 0.063 13.4 0.0 3.1 8.0 0.0 2.3 2 0 0 2 2 2 0 Rhabdovirus Non-virion protein Radical_SAM PF04055.21 ORF16642 - 0.086 13.2 0.0 3.1 8.1 0.0 2.5 2 1 0 2 2 2 0 Radical SAM superfamily DUF4862 PF16154.5 ORF16642 - 0.092 12.1 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4862) Apolipoprotein PF01442.18 ORF12128 - 0.0012 18.7 11.5 0.0012 18.7 11.5 2.5 3 0 0 3 3 3 1 Apolipoprotein A1/A4/E domain WASH_WAHD PF11945.8 ORF12128 - 0.0057 16.2 1.5 0.0085 15.6 1.5 1.4 1 0 0 1 1 1 1 WAHD domain of WASH complex DUF724 PF05266.14 ORF12128 - 0.0096 15.8 10.6 0.059 13.2 10.2 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF724) PMEI PF04043.15 ORF12128 - 0.026 14.9 0.9 0.059 13.7 0.9 1.6 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor F_actin_bind PF08919.10 ORF12128 - 0.03 14.4 7.1 0.064 13.4 2.4 3.3 3 1 0 3 3 3 0 F-actin binding Exonuc_VII_L PF02601.15 ORF12128 - 0.033 13.7 13.2 0.083 12.4 13.2 1.6 1 1 0 1 1 1 0 Exonuclease VII, large subunit Rop-like PF05082.13 ORF12128 - 0.043 13.6 0.2 0.043 13.6 0.2 2.5 3 1 0 3 3 2 0 Rop-like DUF3053 PF11254.8 ORF12128 - 0.047 13.3 6.9 0.055 13.1 5.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3053) DUF2239 PF09998.9 ORF12128 - 0.062 13.1 2.7 0.86 9.4 0.4 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2239) DUF948 PF06103.11 ORF12128 - 0.11 12.8 3.0 0.62 10.4 2.9 2.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) POX PF07526.11 ORF12128 - 0.14 12.8 5.9 0.049 14.2 2.3 2.0 3 0 0 3 3 1 0 Associated with HOX Spc7 PF08317.11 ORF12128 - 0.14 11.0 10.5 0.042 12.7 6.5 1.9 2 0 0 2 2 2 0 Spc7 kinetochore protein Prominin PF05478.11 ORF12128 - 0.22 9.5 9.3 0.15 10.0 7.2 1.6 1 1 0 2 2 2 0 Prominin Fib_alpha PF08702.10 ORF12128 - 0.31 11.2 9.7 0.43 10.8 6.6 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 ORF12128 - 0.32 11.1 8.1 0.16 12.0 4.3 2.3 2 1 1 3 3 2 0 Protein of unknown function (DUF1664) CLZ PF16526.5 ORF12128 - 0.32 11.4 12.1 0.077 13.4 4.9 2.9 3 0 0 3 3 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Phage_GP20 PF06810.11 ORF12128 - 0.36 10.6 5.4 0.61 9.9 3.6 2.2 1 1 1 2 2 2 0 Phage minor structural protein GP20 CheZ PF04344.13 ORF12128 - 0.36 10.7 8.7 0.084 12.8 3.8 2.2 2 1 1 3 3 3 0 Chemotaxis phosphatase, CheZ Csm1_N PF18504.1 ORF12128 - 0.43 10.9 7.2 0.42 11.0 4.0 2.7 1 1 1 2 2 2 0 Csm1 N-terminal domain ApoO PF09769.9 ORF12128 - 0.44 10.5 3.5 0.47 10.4 0.9 2.4 2 1 1 3 3 3 0 Apolipoprotein O DUF16 PF01519.16 ORF12128 - 0.55 10.8 7.0 1.3 9.6 6.3 2.0 1 1 0 1 1 1 0 Protein of unknown function DUF16 TMPIT PF07851.13 ORF12128 - 0.81 8.9 7.7 1.5 8.0 7.7 1.4 1 0 0 1 1 1 0 TMPIT-like protein Fez1 PF06818.15 ORF12128 - 1.3 9.4 14.8 0.98 9.8 12.1 2.1 2 1 0 2 2 2 0 Fez1 FlaC_arch PF05377.11 ORF12128 - 1.4 9.4 8.8 5.6 7.4 1.0 3.6 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) OmpH PF03938.14 ORF12128 - 2 8.7 15.2 0.22 11.9 9.9 2.1 3 0 0 3 3 2 0 Outer membrane protein (OmpH-like) Remorin_C PF03763.13 ORF12128 - 2.2 8.2 8.6 6 6.8 6.7 2.3 1 1 1 2 2 2 0 Remorin, C-terminal region APG6_N PF17675.1 ORF12128 - 2.5 8.6 16.0 6.8 7.2 10.7 2.6 2 0 0 2 2 2 0 Apg6 coiled-coil region Gp58 PF07902.11 ORF12128 - 2.8 6.1 9.3 4.6 5.4 9.3 1.3 1 0 0 1 1 1 0 gp58-like protein HisKA_3 PF07730.13 ORF12128 - 5.6 7.6 11.3 1.1 9.8 1.4 3.6 2 1 2 4 4 4 0 Histidine kinase COG2 PF06148.11 ORF12128 - 7.1 6.7 12.7 0.53 10.4 5.7 2.6 3 1 0 3 3 2 0 COG (conserved oligomeric Golgi) complex component, COG2 BRE1 PF08647.11 ORF12128 - 8.3 6.6 14.3 0.08 13.0 5.6 2.2 3 1 0 3 3 1 0 BRE1 E3 ubiquitin ligase Abhydrolase_1 PF00561.20 ORF11741 - 0.0094 15.6 0.1 0.23 11.1 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold FAD-oxidase_C PF02913.19 ORF110575 - 8.5e-33 114.0 0.0 1e-32 113.7 0.0 1.0 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FBPase PF00316.20 ORF105895 - 0.11 11.9 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Fructose-1-6-bisphosphatase, N-terminal domain NAD_binding_2 PF03446.15 ORF105118 - 1.3e-38 132.7 0.1 1.8e-38 132.2 0.1 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF105118 - 1.9e-27 95.9 0.0 2.8e-27 95.4 0.0 1.2 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 2-Hacid_dh_C PF02826.19 ORF105118 - 0.0015 18.0 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SNARE PF05739.19 ORF102275 - 0.0014 18.5 0.1 0.0014 18.5 0.1 2.0 2 0 0 2 2 2 1 SNARE domain AI-2E_transport PF01594.16 ORF102275 - 0.036 13.2 0.1 0.036 13.2 0.1 1.8 2 1 1 3 3 3 0 AI-2E family transporter Arteri_GP4 PF02497.15 ORF102275 - 0.036 14.2 0.0 0.063 13.4 0.0 1.4 1 0 0 1 1 1 0 Arterivirus glycoprotein Baculo_PEP_C PF04513.12 ORF102275 - 0.049 13.7 5.7 2.5 8.1 0.3 2.3 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DASH_Dad1 PF08649.10 ORF102275 - 0.05 13.8 0.3 0.05 13.8 0.3 3.1 4 0 0 4 4 4 0 DASH complex subunit Dad1 DUF4550 PF15084.6 ORF102275 - 0.051 14.0 0.4 0.051 14.0 0.4 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4550) T3SSipB PF16535.5 ORF102275 - 0.3 11.5 5.1 0.39 11.2 0.2 2.7 2 1 1 3 3 3 0 Type III cell invasion protein SipB Spectrin PF00435.21 ORF102275 - 0.47 11.0 6.6 0.78 10.3 2.9 2.7 2 1 0 2 2 2 0 Spectrin repeat DUF2951 PF11166.8 ORF102275 - 6.4 7.1 16.2 0.11 12.8 0.9 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF2951) Orf78 PF06024.12 ORF102275 - 6.7 7.1 9.4 0.25 11.7 0.6 2.5 3 0 0 3 3 3 0 Orf78 (ac78) ETRAMP PF09716.10 ORF102275 - 7.5 6.7 10.6 84 3.3 10.6 2.7 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Toxin_19 PF08088.12 ORF100379 - 5.1 7.3 13.2 2.2 8.5 9.3 2.5 2 0 0 2 2 2 0 Conotoxin I-superfamily RCC1_2 PF13540.6 NODE_24681_length_847_cov_263.411330_g19223_i0forward_frame_1 - 8.1e-06 25.5 17.5 0.49 10.2 0.2 6.6 6 0 0 6 6 6 4 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 NODE_24681_length_847_cov_263.411330_g19223_i0forward_frame_1 - 0.21 11.5 0.6 2.5 8.0 0.0 2.5 2 1 1 3 3 3 0 Lipocalin / cytosolic fatty-acid binding protein family Virulence_RhuM PF13310.6 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_2 - 0.097 11.9 0.1 0.14 11.4 0.1 1.2 1 0 0 1 1 1 0 Virulence protein RhuM family EF-hand_7 PF13499.6 NODE_24589_length_850_cov_3.006135_g19155_i0reverse_frame_2 - 0.00034 21.0 5.7 0.82 10.2 0.1 3.5 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_24589_length_850_cov_3.006135_g19155_i0reverse_frame_2 - 0.00048 19.9 9.1 0.24 11.4 0.2 4.4 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 NODE_24589_length_850_cov_3.006135_g19155_i0reverse_frame_2 - 1.2 8.9 6.8 0.79 9.4 0.3 3.6 4 0 0 4 4 4 0 EF hand LppC PF04348.13 NODE_24588_length_850_cov_3.046626_g19154_i0forward_frame_3 - 1.1e-10 41.0 5.1 1.3e-10 40.8 5.1 1.1 1 0 0 1 1 1 1 LppC putative lipoprotein TPR_19 PF14559.6 NODE_24588_length_850_cov_3.046626_g19154_i0forward_frame_3 - 0.0043 17.5 5.9 0.0055 17.2 1.1 2.2 1 1 0 2 2 2 1 Tetratricopeptide repeat PEX11 PF05648.14 NODE_24582_length_850_cov_61.341104_g19148_i0forward_frame_3 - 0.012 15.0 0.0 0.024 14.1 0.0 1.4 1 0 0 1 1 1 0 Peroxisomal biogenesis factor 11 (PEX11) PEX11 PF05648.14 NODE_24582_length_850_cov_61.341104_g19148_i0forward_frame_2 - 6e-07 29.2 0.1 8.4e-07 28.7 0.1 1.2 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) PhoLip_ATPase_N PF16209.5 NODE_24581_length_850_cov_72.771779_g19147_i0forward_frame_3 - 1.6e-25 88.5 6.2 1.6e-25 88.5 6.2 2.2 2 0 0 2 2 2 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 NODE_24581_length_850_cov_72.771779_g19147_i0forward_frame_3 - 2e-07 30.7 0.8 1.7e-06 27.7 0.0 2.1 2 0 0 2 2 2 1 E1-E2 ATPase GED PF02212.18 NODE_24550_length_850_cov_1232.582822_g19118_i0reverse_frame_3 - 0.17 12.1 0.1 0.29 11.3 0.1 1.3 1 0 0 1 1 1 0 Dynamin GTPase effector domain LysR_substrate PF03466.20 NODE_24504_length_852_cov_3.223990_g19077_i0forward_frame_3 - 1.1e-31 109.9 0.1 1.7e-31 109.2 0.1 1.4 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 NODE_24504_length_852_cov_3.223990_g19077_i0forward_frame_3 - 4.5e-22 77.8 2.3 1.2e-21 76.4 2.3 1.8 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 NODE_24504_length_852_cov_3.223990_g19077_i0forward_frame_3 - 0.054 13.3 0.5 0.12 12.2 0.5 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain MIP-T3_C PF17749.1 ORF95209 - 8.8e-35 120.0 9.6 1.5e-34 119.2 9.6 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF95209 - 0.0037 17.5 4.4 0.019 15.2 4.4 2.1 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF95209 - 0.011 16.1 0.8 0.026 14.8 0.8 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 ORF95209 - 0.012 16.0 8.1 0.057 13.9 3.1 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 IL6 PF00489.17 ORF95209 - 0.025 14.1 0.4 0.099 12.2 0.4 1.8 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family AAA_13 PF13166.6 ORF95209 - 0.029 13.0 5.9 0.039 12.6 5.9 1.0 1 0 0 1 1 1 0 AAA domain Spidroin_MaSp PF11260.8 ORF95209 - 0.038 14.3 0.1 0.073 13.4 0.1 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Transcrip_act PF04949.13 ORF95209 - 0.05 13.5 7.6 0.39 10.6 7.6 2.2 1 1 0 1 1 1 0 Transcriptional activator DUF1664 PF07889.12 ORF95209 - 0.11 12.5 2.0 0.51 10.4 1.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF95209 - 0.18 11.9 18.0 0.14 12.3 6.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF95209 - 0.2 11.9 11.4 0.039 14.2 2.1 2.4 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain YtxH PF12732.7 ORF95209 - 0.33 11.5 4.3 3.1 8.4 2.8 2.6 2 1 0 2 2 2 0 YtxH-like protein TMF_DNA_bd PF12329.8 ORF95209 - 1.3 9.0 12.8 4.9 7.2 3.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF95209 - 1.8 7.4 12.3 0.044 12.7 4.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein Pkinase PF00069.25 ORF93053 - 0.022 14.1 0.0 0.031 13.7 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain PAP_RNA-bind PF04926.15 ORF93053 - 0.059 13.0 0.0 0.082 12.5 0.0 1.3 1 0 0 1 1 1 0 Poly(A) polymerase predicted RNA binding domain SH3_2 PF07653.17 ORF92636 - 2.4e-10 39.9 0.0 0.00022 20.9 0.0 2.2 2 0 0 2 2 2 2 Variant SH3 domain SH3_9 PF14604.6 ORF92636 - 1.5e-07 31.2 0.1 0.0054 16.6 0.0 2.5 2 0 0 2 2 2 2 Variant SH3 domain SH3_1 PF00018.28 ORF92636 - 1.1e-05 24.9 0.3 0.014 15.0 0.0 2.7 2 1 0 2 2 2 2 SH3 domain DUF4453 PF14627.6 ORF92636 - 0.021 14.9 0.0 0.38 10.9 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4453) HTH_Tnp_ISL3 PF13542.6 ORF86087 - 0.03 13.8 0.5 5.3 6.5 0.1 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Pyridox_oxase_2 PF12766.7 ORF85172 - 1.8e-21 76.6 0.0 3e-21 75.9 0.0 1.4 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase tRNA-synt_1c_C PF03950.18 ORF83704 - 1e-37 129.7 0.0 1.4e-37 129.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1c PF00749.21 ORF83704 - 0.011 14.6 0.0 0.016 14.2 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain WD40 PF00400.32 ORF80617 - 8.5e-16 58.1 1.4 7.6e-06 26.6 0.2 4.7 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF80617 - 1.2e-06 28.7 0.3 0.77 10.1 0.0 5.2 2 2 4 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain Kelch_5 PF13854.6 ORF80617 - 0.0037 17.2 0.6 11 6.1 0.0 3.4 3 0 0 3 3 3 2 Kelch motif Nup160 PF11715.8 ORF80617 - 0.012 14.3 0.0 2.7 6.5 0.0 2.2 2 0 0 2 2 2 0 Nucleoporin Nup120/160 TIMP PF00965.17 ORF80617 - 0.098 12.5 0.1 0.21 11.4 0.0 1.8 1 1 0 1 1 1 0 Tissue inhibitor of metalloproteinase AAA_lid_3 PF17862.1 ORF79754 - 0.00053 19.7 0.0 0.00092 19.0 0.0 1.4 1 0 0 1 1 1 1 AAA+ lid domain GRIP PF01465.20 ORF74613 - 0.38 10.7 5.6 0.44 10.5 0.3 2.6 2 1 0 2 2 2 0 GRIP domain Helicase_C PF00271.31 ORF71902 - 4.1e-15 56.1 0.0 7.9e-15 55.2 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF71902 - 6.7e-07 28.8 0.0 1e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Helicase_C_2 PF13307.6 ORF71902 - 0.15 12.2 0.0 0.3 11.2 0.0 1.5 1 1 0 1 1 1 0 Helicase C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks57.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks57.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks57.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks57.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ArfGap PF01412.18 ORF70350 - 2.6e-25 88.8 0.2 4.8e-25 87.9 0.2 1.5 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf DUF4088 PF13317.6 ORF70350 - 0.1 12.2 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4088) HRI1 PF16815.5 ORF69455 - 0.16 11.7 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein HRI1 MIP-T3_C PF17749.1 ORF69398 - 8.8e-35 120.0 9.6 1.5e-34 119.2 9.6 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF69398 - 0.0037 17.5 4.4 0.019 15.2 4.4 2.1 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF69398 - 0.011 16.1 0.8 0.026 14.8 0.8 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 ORF69398 - 0.012 16.0 8.1 0.057 13.9 3.1 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 IL6 PF00489.17 ORF69398 - 0.025 14.1 0.4 0.099 12.2 0.4 1.8 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family AAA_13 PF13166.6 ORF69398 - 0.029 13.0 5.9 0.039 12.6 5.9 1.0 1 0 0 1 1 1 0 AAA domain Spidroin_MaSp PF11260.8 ORF69398 - 0.038 14.3 0.1 0.073 13.4 0.1 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Transcrip_act PF04949.13 ORF69398 - 0.05 13.5 7.6 0.39 10.6 7.6 2.2 1 1 0 1 1 1 0 Transcriptional activator DUF1664 PF07889.12 ORF69398 - 0.11 12.5 2.0 0.51 10.4 1.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF69398 - 0.18 11.9 18.0 0.14 12.3 6.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF69398 - 0.2 11.9 11.4 0.039 14.2 2.1 2.4 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain YtxH PF12732.7 ORF69398 - 0.33 11.5 4.3 3.1 8.4 2.8 2.6 2 1 0 2 2 2 0 YtxH-like protein TMF_DNA_bd PF12329.8 ORF69398 - 1.3 9.0 12.8 4.9 7.2 3.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF69398 - 1.8 7.4 12.3 0.044 12.7 4.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein MORN PF02493.20 ORF67673 - 5.3e-41 136.1 64.9 1.1e-07 31.3 1.1 9.8 10 1 0 10 10 10 8 MORN repeat KR PF08659.10 ORF67156 - 3.5e-07 30.3 0.2 5.8e-07 29.6 0.2 1.3 1 0 0 1 1 1 1 KR domain RrnaAD PF00398.20 ORF67156 - 0.014 14.5 0.0 0.02 14.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase EMC3_TMCO1 PF01956.16 ORF66720 - 2.1e-30 105.7 8.0 3.6e-29 101.7 8.0 2.3 1 1 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like Bestrophin PF01062.21 ORF62341 - 0.0066 15.9 0.0 0.0085 15.5 0.0 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Ank_2 PF12796.7 ORF61866 - 2.5e-40 136.9 4.0 2.5e-16 60.0 0.2 4.1 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF61866 - 2.3e-30 104.6 7.9 7.7e-08 32.7 0.1 6.1 2 2 5 7 7 7 7 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF61866 - 2.8e-28 94.8 7.3 0.0029 18.0 0.0 8.2 8 0 0 8 8 8 7 Ankyrin repeat Ank PF00023.30 ORF61866 - 4.5e-25 86.9 17.5 0.0028 18.0 0.0 8.1 8 0 0 8 8 8 8 Ankyrin repeat Ank_5 PF13857.6 ORF61866 - 7.3e-21 74.0 16.2 0.0017 18.6 0.0 7.7 2 2 6 8 8 8 8 Ankyrin repeats (many copies) Pyridox_oxase_2 PF12766.7 ORF61396 - 1.8e-21 76.6 0.0 3e-21 75.9 0.0 1.4 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase SCFA_trans PF02667.14 ORF59875 - 1.5e-144 482.4 13.4 1.7e-144 482.2 13.4 1.0 1 0 0 1 1 1 1 Short chain fatty acid transporter CitMHS PF03600.16 ORF59875 - 0.59 9.3 24.6 0.055 12.7 17.0 2.2 1 1 1 2 2 2 0 Citrate transporter WD40 PF00400.32 ORF56460 - 3.6e-14 52.9 0.2 0.007 17.2 0.0 4.3 4 0 0 4 4 4 3 WD domain, G-beta repeat Nup160 PF11715.8 ORF56460 - 0.14 10.8 0.0 0.22 10.1 0.0 1.4 1 1 0 1 1 1 0 Nucleoporin Nup120/160 Glyco_hydro_16 PF00722.21 ORF56447 - 1.7e-06 27.6 0.1 6.2e-05 22.5 0.0 2.8 2 1 1 3 3 3 1 Glycosyl hydrolases family 16 AAT PF03417.16 ORF56136 - 0.21 11.3 1.4 0.38 10.4 1.2 1.7 1 1 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Fib_alpha PF08702.10 ORF56136 - 2.9 8.1 16.4 0.73 10.0 13.1 1.7 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family HTH_Tnp_ISL3 PF13542.6 ORF52411 - 0.03 13.8 0.5 5.3 6.5 0.1 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Glyco_hydro_18 PF00704.28 ORF50040 - 1.6e-35 123.3 0.1 2e-35 123.0 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 MIP-T3_C PF17749.1 ORF46366 - 8.8e-35 120.0 9.6 1.5e-34 119.2 9.6 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF46366 - 0.0037 17.5 4.4 0.019 15.2 4.4 2.1 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF46366 - 0.011 16.1 0.8 0.026 14.8 0.8 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 ORF46366 - 0.012 16.0 8.1 0.057 13.9 3.1 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 IL6 PF00489.17 ORF46366 - 0.025 14.1 0.4 0.099 12.2 0.4 1.8 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family AAA_13 PF13166.6 ORF46366 - 0.029 13.0 5.9 0.039 12.6 5.9 1.0 1 0 0 1 1 1 0 AAA domain Spidroin_MaSp PF11260.8 ORF46366 - 0.038 14.3 0.1 0.073 13.4 0.1 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Transcrip_act PF04949.13 ORF46366 - 0.05 13.5 7.6 0.39 10.6 7.6 2.2 1 1 0 1 1 1 0 Transcriptional activator DUF1664 PF07889.12 ORF46366 - 0.11 12.5 2.0 0.51 10.4 1.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF46366 - 0.18 11.9 18.0 0.14 12.3 6.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF46366 - 0.2 11.9 11.4 0.039 14.2 2.1 2.4 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain YtxH PF12732.7 ORF46366 - 0.33 11.5 4.3 3.1 8.4 2.8 2.6 2 1 0 2 2 2 0 YtxH-like protein TMF_DNA_bd PF12329.8 ORF46366 - 1.3 9.0 12.8 4.9 7.2 3.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF46366 - 1.8 7.4 12.3 0.044 12.7 4.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein Cas_Csy1 PF09611.10 ORF39785 - 0.031 13.3 0.1 0.043 12.9 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) Mito_carr PF00153.27 ORF39745 - 3.2e-28 97.5 4.0 3e-12 46.3 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein adh_short PF00106.25 ORF38454 - 1e-38 132.7 0.0 1.3e-38 132.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF38454 - 3e-18 66.2 0.0 3.8e-18 65.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Polysacc_synt_2 PF02719.15 ORF38454 - 5.8e-07 28.9 0.0 7.3e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF38454 - 6e-07 29.5 0.0 7.9e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 KR domain Glyco_tran_WecB PF03808.13 ORF38454 - 0.00072 19.5 0.0 0.0013 18.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase WecB/TagA/CpsF family Epimerase PF01370.21 ORF38454 - 0.0045 16.5 0.0 0.0068 15.9 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF38454 - 0.0095 15.8 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding DUF727 PF05303.12 ORF38454 - 0.017 15.2 0.0 0.2 11.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF727) 3HCDH_N PF02737.18 ORF38454 - 0.062 13.2 0.0 0.086 12.7 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GDP_Man_Dehyd PF16363.5 ORF38454 - 0.11 11.9 0.0 0.21 10.9 0.0 1.5 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase GIDA PF01134.22 ORF38454 - 0.16 11.1 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A Cas6 PF09559.10 ORF38454 - 0.18 11.7 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 Cas6 Crispr p450 PF00067.22 ORF37695 - 0.00064 18.6 0.1 0.00072 18.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 SurA_N PF09312.11 ORF36524 - 5.5e-46 155.5 9.0 5.5e-46 155.5 9.0 1.7 2 0 0 2 2 2 1 SurA N-terminal domain Rotamase PF00639.21 ORF36524 - 2.7e-22 79.5 0.1 1.3e-21 77.4 0.0 2.2 2 1 1 3 3 3 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF36524 - 1.8e-18 67.2 0.0 4.1e-18 66.0 0.0 1.7 1 1 0 1 1 1 1 PPIC-type PPIASE domain SurA_N_3 PF13624.6 ORF36524 - 6.5e-14 52.0 4.9 6.5e-14 52.0 4.9 1.7 3 0 0 3 3 3 1 SurA N-terminal domain Rotamase_2 PF13145.6 ORF36524 - 2.3e-07 31.6 0.0 1.2e-06 29.3 0.0 2.1 2 0 0 2 2 2 1 PPIC-type PPIASE domain SurA_N_2 PF13623.6 ORF36524 - 1.2e-06 28.4 5.0 1.2e-06 28.4 5.0 2.3 1 1 1 2 2 2 1 SurA N-terminal domain Trigger_C PF05698.14 ORF36524 - 0.00038 20.5 2.3 0.00038 20.5 2.3 2.2 2 1 1 3 3 3 1 Bacterial trigger factor protein (TF) C-terminus DUF503 PF04456.12 ORF36524 - 0.15 12.0 1.2 0.49 10.3 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF503) SpoVIF PF14069.6 ORF36524 - 2.4 8.0 9.0 6.5 6.6 2.1 3.9 3 2 1 4 4 4 0 Stage VI sporulation protein F AAA_12 PF13087.6 ORF36198 - 8e-45 152.9 0.0 9.4e-45 152.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 ORF36198 - 0.00017 21.0 0.0 0.00024 20.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) UvrD_C PF13361.6 ORF36198 - 0.011 15.1 0.0 1.7 8.0 0.0 2.1 2 0 0 2 2 2 0 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 ORF36198 - 0.015 15.1 0.2 3.2 7.6 0.0 3.2 3 0 0 3 3 3 0 UvrD-like helicase C-terminal domain Glyco_transf_7N PF13733.6 ORF36198 - 0.039 13.6 0.0 0.089 12.4 0.0 1.6 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 MauE PF07291.11 ORF35057 - 0.018 14.8 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 Methylamine utilisation protein MauE RRM_8 PF11835.8 ORF35057 - 0.091 13.0 0.3 25 5.2 0.0 3.1 2 1 1 3 3 3 0 RRM-like domain Rubredoxin PF00301.20 ORF31953 - 7.9e-10 38.6 3.7 5.9e-09 35.8 3.7 2.4 1 1 0 1 1 1 1 Rubredoxin PHD_4 PF16866.5 ORF31953 - 0.0047 17.0 1.3 0.012 15.7 1.3 1.7 1 0 0 1 1 1 1 PHD-finger PP2C PF00481.21 ORF28223 - 1.4e-41 142.8 0.1 1.8e-41 142.5 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF28223 - 0.00023 20.9 0.7 0.0018 17.9 0.6 2.2 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF28223 - 0.05 13.5 0.1 0.1 12.5 0.1 1.7 1 1 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) VP7 PF00434.18 ORF28223 - 0.23 10.5 0.1 0.32 10.1 0.1 1.1 1 0 0 1 1 1 0 Glycoprotein VP7 PTS_2-RNA PF01885.16 ORF25430 - 2.9e-60 203.4 0.0 3.4e-60 203.2 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Malic_M PF03949.15 ORF22501 - 1e-23 84.0 0.1 5.1e-23 81.7 0.1 1.9 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain DXP_synthase_N PF13292.6 ORF22501 - 0.18 11.0 0.1 0.3 10.3 0.1 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase adh_short PF00106.25 ORF1862 - 6.9e-38 130.1 0.0 8.6e-38 129.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF1862 - 1.1e-17 64.4 0.0 1.4e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Polysacc_synt_2 PF02719.15 ORF1862 - 4.6e-07 29.3 0.0 5.8e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF1862 - 1.3e-06 28.5 0.0 1.7e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 KR domain Glyco_tran_WecB PF03808.13 ORF1862 - 0.0019 18.2 0.0 0.0034 17.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase WecB/TagA/CpsF family Epimerase PF01370.21 ORF1862 - 0.009 15.5 0.0 0.014 14.9 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF727 PF05303.12 ORF1862 - 0.021 14.9 0.0 0.25 11.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF727) NAD_binding_10 PF13460.6 ORF1862 - 0.043 13.7 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding Cas6 PF09559.10 ORF1862 - 0.053 13.5 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 Cas6 Crispr HTH_Tnp_ISL3 PF13542.6 ORF15602 - 0.03 13.8 0.5 5.3 6.5 0.1 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Mito_carr PF00153.27 ORF109080 - 1.2e-16 60.4 6.6 4.3e-07 29.8 0.1 3.5 3 1 0 3 3 3 3 Mitochondrial carrier protein MIP-T3_C PF17749.1 ORF106817 - 8.8e-35 120.0 9.6 1.5e-34 119.2 9.6 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF106817 - 0.0037 17.5 4.4 0.019 15.2 4.4 2.1 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF106817 - 0.011 16.1 0.8 0.026 14.8 0.8 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 ORF106817 - 0.012 16.0 8.1 0.057 13.9 3.1 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 IL6 PF00489.17 ORF106817 - 0.025 14.1 0.4 0.099 12.2 0.4 1.8 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family AAA_13 PF13166.6 ORF106817 - 0.029 13.0 5.9 0.039 12.6 5.9 1.0 1 0 0 1 1 1 0 AAA domain Spidroin_MaSp PF11260.8 ORF106817 - 0.038 14.3 0.1 0.073 13.4 0.1 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Transcrip_act PF04949.13 ORF106817 - 0.05 13.5 7.6 0.39 10.6 7.6 2.2 1 1 0 1 1 1 0 Transcriptional activator DUF1664 PF07889.12 ORF106817 - 0.11 12.5 2.0 0.51 10.4 1.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF106817 - 0.18 11.9 18.0 0.14 12.3 6.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF106817 - 0.2 11.9 11.4 0.039 14.2 2.1 2.4 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain YtxH PF12732.7 ORF106817 - 0.33 11.5 4.3 3.1 8.4 2.8 2.6 2 1 0 2 2 2 0 YtxH-like protein TMF_DNA_bd PF12329.8 ORF106817 - 1.3 9.0 12.8 4.9 7.2 3.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF106817 - 1.8 7.4 12.3 0.044 12.7 4.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein CoA_binding PF02629.19 ORF102278 - 1.9e-31 108.6 0.8 1.9e-31 108.6 0.8 2.2 2 1 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 ORF102278 - 3.4e-20 72.4 0.5 5.7e-20 71.7 0.5 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 ORF102278 - 5.4e-10 39.2 0.0 9.6e-10 38.4 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 ORF102278 - 0.00035 21.1 0.0 0.0011 19.4 0.0 1.8 2 0 0 2 2 2 1 CoA binding domain DUF3685 PF12452.8 NODE_24824_length_844_cov_67.782447_g19344_i0reverse_frame_1 - 0.2 11.3 1.6 0.37 10.5 1.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) ParD PF09386.10 NODE_24824_length_844_cov_67.782447_g19344_i0reverse_frame_1 - 2.2 8.7 6.3 3.1 8.3 0.2 3.5 2 2 1 4 4 4 0 Antitoxin ParD Smr PF01713.21 NODE_24810_length_844_cov_154.730532_g19330_i0reverse_frame_1 - 2.1e-05 24.8 0.0 6.4e-05 23.2 0.0 1.8 1 1 0 1 1 1 1 Smr domain Ribosomal_60s PF00428.19 NODE_24810_length_844_cov_154.730532_g19330_i0reverse_frame_1 - 0.00099 19.7 0.2 0.00099 19.7 0.2 2.3 2 0 0 2 2 2 1 60s Acidic ribosomal protein PPR PF01535.20 NODE_24810_length_844_cov_154.730532_g19330_i0reverse_frame_1 - 0.029 14.6 0.2 0.42 11.0 0.0 2.4 2 0 0 2 2 2 0 PPR repeat PPR_3 PF13812.6 NODE_24810_length_844_cov_154.730532_g19330_i0reverse_frame_1 - 0.045 13.8 0.0 0.088 12.9 0.0 1.4 1 0 0 1 1 1 0 Pentatricopeptide repeat domain ApbE PF02424.15 NODE_24704_length_847_cov_3.160099_g19243_i0forward_frame_3 - 6.7e-37 127.4 0.0 1e-36 126.8 0.0 1.3 1 0 0 1 1 1 1 ApbE family Porin_1 PF00267.21 NODE_24704_length_847_cov_3.160099_g19243_i0forward_frame_3 - 3.7e-06 26.6 0.2 5.3e-06 26.1 0.2 1.2 1 0 0 1 1 1 1 Gram-negative porin Peptidase_C21 PF05381.12 NODE_24704_length_847_cov_3.160099_g19243_i0forward_frame_3 - 0.17 12.2 0.0 0.44 10.9 0.0 1.7 1 0 0 1 1 1 0 Tymovirus endopeptidase Gemini_V2 PF01524.17 NODE_24704_length_847_cov_3.160099_g19243_i0forward_frame_2 - 0.1 12.8 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Geminivirus V2 protein MyTH4 PF00784.17 NODE_24686_length_847_cov_216.971675_g19227_i0reverse_frame_2 - 0.18 12.3 13.4 0.69 10.4 0.2 3.8 2 1 2 4 4 4 0 MyTH4 domain DUF3864 PF12980.7 NODE_24686_length_847_cov_216.971675_g19227_i0reverse_frame_2 - 0.26 11.6 1.2 6.1 7.2 0.1 2.5 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3864) RCC1_2 PF13540.6 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 1.4e-07 31.1 16.8 0.22 11.4 0.1 6.0 6 0 0 6 6 6 4 Regulator of chromosome condensation (RCC1) repeat XRCC1_N PF01834.16 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 0.028 14.4 0.7 19 5.2 0.1 3.4 1 1 3 4 4 4 0 XRCC1 N terminal domain Lipocalin_7 PF14651.6 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 0.12 12.4 2.5 0.85 9.6 0.1 2.7 1 1 2 3 3 3 0 Lipocalin / cytosolic fatty-acid binding protein family Med3 PF11593.8 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 0.26 10.4 12.0 0.42 9.8 12.0 1.4 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Choline_sulf_C PF12411.8 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 1.8 8.5 5.1 15 5.5 0.2 3.5 4 0 0 4 4 4 0 Choline sulfatase enzyme C terminal UPF0047 PF01894.17 NODE_24681_length_847_cov_263.411330_g19223_i0reverse_frame_3 - 0.023 14.9 0.0 15 5.8 0.0 3.6 2 1 2 4 4 4 0 Uncharacterised protein family UPF0047 Lar_restr_allev PF14354.6 NODE_24681_length_847_cov_263.411330_g19223_i0reverse_frame_3 - 2.8 8.4 9.0 16 6.0 3.9 3.2 2 1 1 3 3 3 0 Restriction alleviation protein Lar Glycos_transf_2 PF00535.26 NODE_24660_length_848_cov_2.592866_g19211_i0reverse_frame_2 - 6.2e-34 117.2 0.1 8.1e-34 116.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 NODE_24660_length_848_cov_2.592866_g19211_i0reverse_frame_2 - 6.1e-15 55.7 0.0 8.5e-15 55.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 NODE_24660_length_848_cov_2.592866_g19211_i0reverse_frame_2 - 6.5e-12 45.5 0.0 1e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 NODE_24660_length_848_cov_2.592866_g19211_i0reverse_frame_2 - 0.00045 20.7 0.1 0.0015 19.0 0.1 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 2 Myb_DNA-bind_4 PF13837.6 NODE_24652_length_848_cov_64.360394_g15243_i2reverse_frame_3 - 0.0033 17.8 2.1 0.0094 16.3 2.1 1.8 1 0 0 1 1 1 1 Myb/SANT-like DNA-binding domain JIP_LZII PF16471.5 ORF9937 - 0.006 16.7 3.5 0.006 16.7 3.5 2.1 2 0 0 2 2 2 1 JNK-interacting protein leucine zipper II YscO PF07321.12 ORF9937 - 0.03 14.3 3.1 0.055 13.4 3.1 1.3 1 0 0 1 1 1 0 Type III secretion protein YscO Laminin_II PF06009.12 ORF9937 - 0.14 12.2 3.5 0.1 12.6 1.5 1.8 2 0 0 2 2 2 0 Laminin Domain II HIP1_clath_bdg PF16515.5 ORF9937 - 0.14 12.8 4.7 0.36 11.4 4.6 1.8 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Tropomyosin_1 PF12718.7 ORF9937 - 0.16 12.1 9.0 0.3 11.2 9.0 1.5 1 0 0 1 1 1 0 Tropomyosin like DUF3450 PF11932.8 ORF9937 - 0.17 11.2 5.3 0.28 10.4 5.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DivIC PF04977.15 ORF9937 - 0.17 11.6 4.3 0.3 10.9 3.5 1.8 1 1 0 1 1 1 0 Septum formation initiator TMPIT PF07851.13 ORF9937 - 0.33 10.2 5.8 0.66 9.2 5.8 1.5 1 0 0 1 1 1 0 TMPIT-like protein RPW8 PF05659.11 ORF9937 - 0.34 10.6 10.1 0.17 11.5 6.8 2.1 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MCPsignal PF00015.21 ORF9937 - 0.43 10.4 3.4 0.28 11.0 1.1 1.8 2 0 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF1664 PF07889.12 ORF9937 - 0.61 10.1 10.9 0.67 10.0 5.0 2.8 2 2 0 2 2 2 0 Protein of unknown function (DUF1664) DUF16 PF01519.16 ORF9937 - 7.2 7.2 12.7 5.3 7.6 7.2 2.8 2 1 0 2 2 2 0 Protein of unknown function DUF16 Peptidase_C97 PF05903.14 ORF99126 - 1.4e-20 73.7 0.0 2e-20 73.2 0.0 1.2 1 0 0 1 1 1 1 PPPDE putative peptidase domain Calreticulin PF00262.18 ORF93419 - 3e-29 102.0 0.6 8.3e-26 90.7 0.0 2.1 1 1 1 2 2 2 2 Calreticulin family Scs3p PF10261.9 ORF91140 - 0.074 12.5 0.3 0.11 12.0 0.3 1.2 1 0 0 1 1 1 0 Inositol phospholipid synthesis and fat-storage-inducing TM SUKH-4 PF14435.6 ORF90924 - 0.051 13.6 2.2 0.064 13.3 0.3 2.0 1 1 1 2 2 2 0 SUKH-4 immunity protein IGR PF09597.10 ORF90924 - 0.16 12.1 0.0 0.56 10.3 0.0 1.8 2 0 0 2 2 2 0 IGR protein motif U3_assoc_6 PF08640.11 ORF90578 - 8.4e-17 61.0 16.3 7.5e-16 58.0 6.1 2.6 3 0 0 3 3 3 2 U3 small nucleolar RNA-associated protein 6 Suf PF05843.14 ORF90578 - 0.011 15.7 4.0 1.1 9.2 0.6 2.4 1 1 0 2 2 2 0 Suppressor of forked protein (Suf) Peptidase_C97 PF05903.14 ORF88449 - 1.4e-20 73.7 0.0 2e-20 73.2 0.0 1.2 1 0 0 1 1 1 1 PPPDE putative peptidase domain PEARLI-4 PF05278.12 ORF88192 - 0.006 16.2 1.7 0.012 15.2 1.7 1.4 1 0 0 1 1 1 1 Arabidopsis phospholipase-like protein (PEARLI 4) MBD PF01429.19 ORF88192 - 0.03 14.0 0.0 0.072 12.8 0.0 1.7 1 0 0 1 1 1 0 Methyl-CpG binding domain Peptidase_C2 PF00648.21 ORF8817 - 1.1e-36 126.4 0.2 1.5e-36 126.0 0.2 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Ion_trans PF00520.31 ORF8681 - 6.8e-06 25.5 9.3 6.8e-06 25.5 9.3 1.9 2 0 0 2 2 2 1 Ion transport protein SHP PF03579.13 ORF8681 - 4.5 7.3 8.5 3.4 7.7 1.7 3.0 2 1 1 3 3 3 0 Small hydrophobic protein LapA_dom PF06305.11 ORF82510 - 0.12 12.1 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Stevor PF17410.2 ORF82510 - 0.27 10.7 1.2 0.37 10.3 1.2 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF347 PF03988.12 ORF82510 - 0.28 11.4 4.1 0.18 12.0 0.9 2.1 2 0 0 2 2 2 0 Repeat of Unknown Function (DUF347) PAP_central PF04928.17 ORF81763 - 0.00041 19.4 0.1 0.00069 18.7 0.1 1.3 1 0 0 1 1 1 1 Poly(A) polymerase central domain Nrap_D2 PF17403.2 ORF81763 - 0.00046 20.0 0.0 0.00074 19.3 0.0 1.3 1 0 0 1 1 1 1 Nrap protein PAP/OAS-like domain GRDP-like PF07173.12 ORF81435 - 0.00053 20.7 4.7 0.0043 17.7 1.7 2.6 1 1 1 2 2 2 2 Glycine-rich domain-containing protein-like Laps PF10169.9 ORF81435 - 0.22 12.1 3.3 0.19 12.3 1.8 1.7 1 1 1 2 2 2 0 Learning-associated protein ECH_1 PF00378.20 ORF80106 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF80106 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Kinesin PF00225.23 ORF75567 - 2.3e-73 247.0 3.2 2.3e-73 247.0 3.2 1.5 2 0 0 2 2 2 1 Kinesin motor domain BST2 PF16716.5 ORF75567 - 0.11 13.1 0.3 0.11 13.1 0.3 2.1 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 DEK_C PF08766.11 ORF70634 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain Viral_helicase1 PF01443.18 ORF69485 - 2.1e-06 27.7 0.2 0.00019 21.3 0.2 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase Herpes_Helicase PF02689.14 ORF69485 - 0.0064 14.5 0.0 0.009 14.0 0.0 1.1 1 0 0 1 1 1 1 Helicase AAA_30 PF13604.6 ORF69485 - 0.018 14.7 0.0 0.043 13.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain Chloroa_b-bind PF00504.21 ORF68521 - 6.7e-37 127.5 0.1 2.2e-27 96.6 0.1 2.0 1 1 1 2 2 2 2 Chlorophyll A-B binding protein DUF202 PF02656.15 ORF6590 - 1.9e-06 28.2 10.8 1.1e-05 25.8 10.8 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF202) DUF5325 PF17259.2 ORF6590 - 0.014 15.3 2.0 0.027 14.3 2.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5325) Retrotrans_gag PF03732.17 ORF6590 - 0.05 13.9 0.1 0.078 13.3 0.1 1.3 1 0 0 1 1 1 0 Retrotransposon gag protein Ca_bind_SSO6904 PF18249.1 ORF65378 - 0.091 13.1 1.6 0.16 12.3 0.4 2.0 2 0 0 2 2 2 0 Calcium binding protein SSO6904 Topoisom_I_N PF02919.15 ORF64972 - 0.059 12.9 1.0 0.092 12.2 1.0 1.2 1 0 0 1 1 1 0 Eukaryotic DNA topoisomerase I, DNA binding fragment OST3_OST6 PF04756.13 ORF6434 - 1.4e-40 139.5 0.5 1.6e-40 139.3 0.5 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family EF-hand_6 PF13405.6 ORF63435 - 0.00012 21.7 0.0 0.00033 20.4 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF63435 - 0.00069 19.0 0.2 0.0018 17.7 0.0 1.8 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF63435 - 0.018 15.5 0.0 0.038 14.4 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain pair Ion_trans PF00520.31 ORF63435 - 0.02 14.1 0.1 0.03 13.6 0.1 1.3 1 0 0 1 1 1 0 Ion transport protein EF-hand_5 PF13202.6 ORF63435 - 0.094 12.3 0.0 0.24 11.0 0.0 1.7 1 0 0 1 1 1 0 EF hand DUF2973 PF11189.8 ORF63435 - 0.13 12.4 0.0 0.48 10.6 0.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) DUF591 PF04569.14 ORF60533 - 0.46 10.6 6.6 0.33 11.0 0.9 2.5 2 0 0 2 2 2 0 Protein of unknown function MFS_1 PF07690.16 ORF59811 - 3.3e-33 115.1 23.8 2.4e-18 66.2 8.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF59811 - 0.0016 17.8 4.6 0.086 12.1 0.2 3.0 2 1 1 3 3 3 3 Uncharacterised MFS-type transporter YbfB PTR2 PF00854.21 ORF59811 - 0.0078 15.1 3.9 0.0078 15.1 3.9 1.8 2 0 0 2 2 2 1 POT family ECH_1 PF00378.20 ORF59184 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF59184 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase PFK PF00365.20 ORF57655 - 1.9e-43 148.9 0.4 2.2e-43 148.6 0.4 1.1 1 0 0 1 1 1 1 Phosphofructokinase DAGK_cat PF00781.24 ORF57655 - 0.0053 16.4 0.0 0.01 15.4 0.0 1.6 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Glyco_transf_7C PF02709.14 ORF57596 - 1.3e-07 31.2 2.8 3.3e-07 29.9 1.6 2.1 2 0 0 2 2 2 1 N-terminal domain of galactosyltransferase Ricin_B_lectin PF00652.22 ORF57596 - 0.032 14.5 0.8 0.092 13.0 0.8 1.8 1 1 0 1 1 1 0 Ricin-type beta-trefoil lectin domain Kinesin PF00225.23 ORF54003 - 2.3e-73 247.0 3.2 2.3e-73 247.0 3.2 1.5 2 0 0 2 2 2 1 Kinesin motor domain BST2 PF16716.5 ORF54003 - 0.11 13.1 0.3 0.11 13.1 0.3 2.1 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 zf-C2H2_2 PF12756.7 ORF52434 - 7.9e-16 58.2 5.5 7.9e-16 58.2 5.5 2.6 3 0 0 3 3 3 1 C2H2 type zinc-finger (2 copies) AhpC-TSA PF00578.21 ORF52434 - 0.0026 17.7 0.2 0.028 14.3 0.0 2.3 1 1 1 2 2 2 1 AhpC/TSA family zf-C2H2_jaz PF12171.8 ORF52434 - 0.015 15.6 0.3 0.037 14.3 0.3 1.8 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding HTH_40 PF14493.6 ORF50889 - 0.033 14.6 1.2 0.079 13.4 1.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain WW PF00397.26 ORF50680 - 9e-71 233.6 56.4 4.3e-14 52.3 3.0 6.1 6 0 0 6 6 6 6 WW domain Mustang PF15682.5 ORF50680 - 1e-06 28.7 13.6 2 8.6 0.1 5.5 6 0 0 6 6 6 4 Musculoskeletal, temporally activated-embryonic nuclear protein 1 Arm-DNA-bind_1 PF09003.10 ORF50680 - 0.08 13.1 3.1 23 5.2 0.0 4.2 5 0 0 5 5 5 0 Bacteriophage lambda integrase, Arm DNA-binding domain Iron_transport PF10634.9 ORF50680 - 0.11 12.7 6.2 75 3.5 0.0 4.6 4 1 1 5 5 5 0 Fe2+ transport protein RtxA PF07634.11 ORF50680 - 0.12 12.9 3.5 1.1e+02 3.7 0.0 5.2 6 0 0 6 6 6 0 RtxA repeat Asp PF00026.23 ORF50595 - 2.4e-32 112.6 3.0 2.8e-32 112.4 3.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF50595 - 6.1e-06 26.6 0.4 2.7e-05 24.5 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal FAM165 PF14981.6 ORF50595 - 0.16 11.8 0.1 0.27 11.0 0.1 1.4 1 0 0 1 1 1 0 FAM165 family DNA_pol_A PF00476.20 ORF50558 - 5.2e-129 430.6 0.1 5.8e-129 430.4 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase family A Macro PF01661.21 ORF47634 - 1.2e-30 105.9 0.3 2.7e-30 104.8 0.3 1.6 1 0 0 1 1 1 1 Macro domain DUF3783 PF12646.7 ORF47634 - 0.011 15.6 1.4 0.66 10.0 0.1 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF3783) zf-CCCH_7 PF18586.1 ORF47634 - 0.098 13.0 0.4 0.27 11.6 0.4 1.7 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 Serine_rich PF08824.10 ORF47634 - 0.13 12.3 0.9 0.24 11.4 0.2 1.8 2 0 0 2 2 2 0 Serine rich protein interaction domain SCVP PF17619.2 ORF47634 - 5.4 7.9 8.8 2.4 9.1 0.4 3.0 4 0 0 4 4 4 0 Secreted clade V proteins FKBP_N PF01346.18 ORF47634 - 5.6 8.0 10.6 0.97 10.4 0.2 3.5 3 1 1 4 4 4 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Ldl_recept_a PF00057.18 ORF45832 - 2e-11 43.9 26.5 1.2e-06 28.6 7.1 2.5 2 0 0 2 2 2 2 Low-density lipoprotein receptor domain class A DEK_C PF08766.11 ORF42592 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain ECH_1 PF00378.20 ORF40964 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF40964 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase EF-hand_7 PF13499.6 ORF40513 - 0.015 15.7 0.8 0.65 10.5 0.0 2.8 2 1 1 3 3 3 0 EF-hand domain pair ArsR PF09824.9 ORF40513 - 0.037 13.6 0.2 0.066 12.8 0.2 1.3 1 0 0 1 1 1 0 ArsR transcriptional regulator EF-hand_1 PF00036.32 ORF40513 - 0.038 13.6 0.1 0.31 10.7 0.0 2.3 2 0 0 2 2 2 0 EF hand SNO PF01174.19 ORF40513 - 0.083 12.7 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 SNO glutamine amidotransferase family DUF4336 PF14234.6 ORF39536 - 8.2e-53 179.6 0.2 1.9e-38 132.5 0.0 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4336) Ketoacyl-synt_C PF02801.22 ORF38900 - 3.1e-27 94.9 0.1 4.8e-27 94.3 0.1 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ketoacyl-synt PF00109.26 ORF38900 - 0.0022 17.6 0.0 0.0038 16.8 0.0 1.4 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain IclR PF01614.18 ORF36727 - 8.4e-45 151.8 0.0 1.3e-44 151.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 ORF36727 - 2.4e-14 52.9 0.0 4.6e-14 51.9 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 ORF36727 - 0.00016 21.5 0.0 0.00036 20.4 0.0 1.6 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 ORF36727 - 0.012 15.9 0.0 0.025 14.9 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator TrmB PF01978.19 ORF36727 - 0.022 14.6 0.0 0.07 13.0 0.0 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB ApoA-II PF04711.13 ORF36727 - 0.024 14.8 0.1 0.056 13.6 0.0 1.6 2 0 0 2 2 2 0 Apolipoprotein A-II (ApoA-II) HTH_24 PF13412.6 ORF36727 - 0.077 12.6 0.0 0.17 11.5 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding UAA PF08449.11 ORF36049 - 3.5e-30 105.2 4.2 4.4e-30 104.9 4.2 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF36049 - 0.009 16.2 15.6 0.012 15.8 2.8 2.5 2 1 1 3 3 3 2 EamA-like transporter family CRT-like PF08627.10 ORF36049 - 0.01 14.8 0.5 0.013 14.5 0.5 1.3 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like ECH_1 PF00378.20 ORF35481 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF35481 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase zf-C2H2_2 PF12756.7 ORF34813 - 7.9e-16 58.2 5.5 7.9e-16 58.2 5.5 2.6 3 0 0 3 3 3 1 C2H2 type zinc-finger (2 copies) AhpC-TSA PF00578.21 ORF34813 - 0.0026 17.7 0.2 0.028 14.3 0.0 2.3 1 1 1 2 2 2 1 AhpC/TSA family zf-C2H2_jaz PF12171.8 ORF34813 - 0.015 15.6 0.3 0.037 14.3 0.3 1.8 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding FHA PF00498.26 ORF34634 - 0.16 12.3 0.0 0.26 11.7 0.0 1.3 1 0 0 1 1 1 0 FHA domain CRAL_TRIO PF00650.20 ORF32126 - 1.8e-17 63.5 0.0 2.4e-17 63.1 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain EMP24_GP25L PF01105.24 ORF32126 - 0.009 16.0 0.0 0.013 15.5 0.0 1.2 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD CRAL_TRIO_2 PF13716.6 ORF32126 - 0.018 15.2 0.0 0.027 14.6 0.0 1.2 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain Sulfotransfer_4 PF17784.1 ORF31461 - 1.4e-53 181.9 0.0 1.8e-53 181.6 0.0 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF31461 - 1.7e-06 28.6 4.1 0.0019 18.6 0.5 2.4 1 1 1 2 2 2 2 Sulfotransferase family Sulfotransfer_1 PF00685.27 ORF31461 - 0.00054 19.5 0.0 0.00081 18.9 0.0 1.3 1 0 0 1 1 1 1 Sulfotransferase domain ECH_1 PF00378.20 ORF25995 - 1.4e-36 126.1 0.3 5.8e-36 124.1 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF25995 - 5.5e-23 82.0 0.2 9.3e-23 81.2 0.2 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DEK_C PF08766.11 ORF25068 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain PRMT5_C PF17286.2 ORF24444 - 0.0016 18.4 0.0 0.0022 17.9 0.0 1.2 1 0 0 1 1 1 1 PRMT5 oligomerisation domain DEK_C PF08766.11 ORF2288 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain bZIP_1 PF00170.21 ORF21273 - 0.93 9.6 7.3 14 5.9 1.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor DivIC PF04977.15 ORF21273 - 1.1 9.1 3.7 11 5.9 0.5 2.4 2 0 0 2 2 2 0 Septum formation initiator VGPC1_C PF16799.5 ORF19914 - 0.01 15.8 1.5 0.027 14.5 1.5 1.7 1 0 0 1 1 1 0 C-terminal membrane-localisation domain of ion-channel, VCN1 Exonuc_VII_L PF02601.15 ORF19914 - 0.055 13.0 5.5 0.067 12.7 5.5 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Peptidase_A3 PF02160.15 ORF19914 - 0.098 12.1 4.0 0.14 11.6 4.0 1.2 1 0 0 1 1 1 0 Cauliflower mosaic virus peptidase (A3) FDX-ACB PF03147.14 ORF19914 - 0.18 12.2 2.8 0.72 10.3 2.7 2.0 2 1 0 2 2 2 0 Ferredoxin-fold anticodon binding domain TFIIA PF03153.13 ORF19914 - 0.44 10.5 16.1 0.57 10.1 16.1 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF778 PF05608.12 ORF19914 - 3.6 7.9 5.0 5.8 7.2 0.1 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF778) CDC45 PF02724.14 ORF19914 - 5.7 5.1 16.6 3.7 5.7 15.5 1.3 1 1 0 1 1 1 0 CDC45-like protein MORN PF02493.20 ORF18245 - 5.4e-47 155.0 69.0 5.3e-08 32.3 0.9 9.8 10 0 0 10 10 10 9 MORN repeat ID PF18543.1 ORF18245 - 0.027 14.5 1.5 5.3 7.1 0.3 4.0 4 1 1 5 5 5 0 Intracellular delivery domain DUF3048_C PF17479.2 ORF18245 - 1.1 9.7 21.3 3.9 7.9 1.1 5.2 1 1 5 6 6 6 0 Protein of unknown function (DUF3048) C-terminal domain DEK_C PF08766.11 ORF16205 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain NHL PF01436.21 ORF15502 - 1.5e-27 94.2 4.4 4e-08 32.9 0.2 5.3 5 0 0 5 5 5 5 NHL repeat SGL PF08450.12 ORF15502 - 0.0012 18.5 0.0 0.0083 15.7 0.0 2.0 1 1 1 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 ORF15502 - 0.0081 16.3 0.0 37 4.5 0.0 3.9 3 1 1 4 4 4 1 Strictosidine synthase EF-hand_7 PF13499.6 ORF13294 - 2.3e-06 28.0 0.4 0.0017 18.8 0.2 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF13294 - 0.0067 15.9 0.0 0.036 13.6 0.0 2.2 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF13294 - 0.039 13.9 0.0 0.2 11.7 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain Ist1 PF03398.14 ORF12987 - 0.019 14.9 0.4 0.8 9.6 0.4 2.4 1 1 0 1 1 1 0 Regulator of Vps4 activity in the MVB pathway MFMR_assoc PF16596.5 ORF12987 - 0.084 13.3 4.3 0.13 12.7 4.3 1.2 1 0 0 1 1 1 0 Disordered region downstream of MFMR WD40 PF00400.32 ORF11738 - 9.5e-45 149.7 10.5 1.3e-07 32.2 0.0 7.1 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF11738 - 4.7e-15 55.7 0.5 0.00015 22.0 0.0 4.2 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF11738 - 1.9e-09 36.9 4.8 0.078 11.9 0.1 4.8 1 1 3 5 5 5 4 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF11738 - 2.1e-09 36.6 5.9 0.0071 15.0 0.0 5.4 3 1 2 6 6 6 4 Nucleoporin Nup120/160 eIF2A PF08662.11 ORF11738 - 7e-07 29.3 0.0 0.00015 21.7 0.0 2.7 2 1 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A PQQ_2 PF13360.6 ORF11738 - 0.00015 21.5 3.9 0.0005 19.7 1.0 2.1 2 0 0 2 2 2 1 PQQ-like domain DUF1513 PF07433.11 ORF11738 - 0.0027 16.9 1.2 2.8 7.0 0.0 3.1 2 2 0 3 3 3 2 Protein of unknown function (DUF1513) PD40 PF07676.12 ORF11738 - 0.039 13.9 1.4 1.7 8.7 0.0 3.5 4 0 0 4 4 4 0 WD40-like Beta Propeller Repeat WD40_like PF17005.5 ORF11738 - 0.15 11.4 0.0 22 4.3 0.0 2.7 3 0 0 3 3 3 0 WD40-like domain Cytochrom_D1 PF02239.16 ORF11738 - 0.17 10.4 0.1 5 5.6 0.0 2.2 1 1 1 2 2 2 0 Cytochrome D1 heme domain DUF1283 PF06932.11 ORF11738 - 0.99 9.6 2.9 59 4.0 0.1 4.2 5 0 0 5 5 5 0 Protein of unknown function (DUF1283) DEK_C PF08766.11 ORF111924 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain ECH_1 PF00378.20 ORF111578 - 1.7e-36 125.8 0.3 7.5e-36 123.7 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF111578 - 6.1e-23 81.8 0.2 1e-22 81.1 0.2 1.4 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DEK_C PF08766.11 ORF110 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain LUC7 PF03194.15 ORF10975 - 3.7e-38 131.6 15.5 5.9e-38 131.0 15.5 1.3 1 0 0 1 1 1 1 LUC7 N_terminus Baculo_PEP_C PF04513.12 ORF10975 - 0.076 13.1 2.5 0.65 10.0 1.2 2.4 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Glyco_hydro_80 PF13647.6 ORF10975 - 0.091 12.2 0.1 0.14 11.6 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A Apolipoprotein PF01442.18 ORF10975 - 0.13 12.1 8.2 0.82 9.5 8.2 2.2 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain YtxH PF12732.7 ORF10975 - 0.26 11.8 9.6 0.72 10.4 2.4 3.3 2 1 1 3 3 3 0 YtxH-like protein Atypical_Card PF18461.1 ORF10975 - 0.33 11.2 2.4 0.46 10.7 0.8 2.0 2 0 0 2 2 2 0 Atypical caspase recruitment domain RGS-like PF09128.11 ORF10975 - 0.52 10.0 10.2 0.12 12.0 5.4 2.0 1 1 1 2 2 2 0 Regulator of G protein signalling-like domain DUF883 PF05957.13 ORF10975 - 4.5 7.9 7.4 11 6.7 0.2 3.2 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) ECH_1 PF00378.20 ORF107795 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF107795 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DnaJ PF00226.31 ORF102305 - 7.2e-10 38.9 0.0 1.9e-09 37.5 0.0 1.7 1 0 0 1 1 1 1 DnaJ domain Retrotrans_gag PF03732.17 ORF102305 - 0.18 12.1 6.5 3.4 8.0 1.0 3.1 2 1 1 3 3 3 0 Retrotransposon gag protein eIF-3c_N PF05470.12 ORF102305 - 0.39 9.0 7.6 0.46 8.7 7.6 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus DUF1593 PF07632.11 ORF102305 - 0.46 9.9 2.4 0.44 9.9 0.9 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1593) AAA_23 PF13476.6 ORF102305 - 0.71 10.3 3.2 0.93 10.0 3.2 1.2 1 0 0 1 1 1 0 AAA domain DUF4047 PF13256.6 ORF102305 - 1.1 9.5 6.7 11 6.3 4.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4047) Alpha-mann_mid PF09261.11 NODE_24914_length_841_cov_428.987593_g19417_i0forward_frame_1 - 0.00043 20.4 0.1 0.00083 19.5 0.1 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain Alpha-mann_mid PF09261.11 NODE_24911_length_841_cov_549.359801_g19414_i0reverse_frame_1 - 0.00041 20.4 0.1 0.00083 19.5 0.1 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain FAS_meander PF17951.1 NODE_24911_length_841_cov_549.359801_g19414_i0reverse_frame_1 - 0.14 12.0 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 Fatty acid synthase meander beta sheet domain Alpha-mann_mid PF09261.11 NODE_24909_length_841_cov_669.620347_g19413_i0forward_frame_1 - 0.00041 20.4 0.1 0.00083 19.5 0.1 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain Alpha-mann_mid PF09261.11 NODE_24908_length_841_cov_723.686104_g19412_i0forward_frame_1 - 0.0004 20.5 0.0 0.00077 19.6 0.0 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain FAS_meander PF17951.1 NODE_24908_length_841_cov_723.686104_g19412_i0forward_frame_1 - 0.15 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 Fatty acid synthase meander beta sheet domain Alpha-mann_mid PF09261.11 NODE_24906_length_841_cov_754.258065_g19411_i0forward_frame_1 - 0.00015 21.9 0.0 0.00029 20.9 0.0 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain FAS_meander PF17951.1 NODE_24906_length_841_cov_754.258065_g19411_i0forward_frame_1 - 0.16 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 Fatty acid synthase meander beta sheet domain Glyco_hydro_2_C PF02836.17 NODE_24896_length_842_cov_3.639405_g19404_i0forward_frame_1 - 1.5e-59 201.6 0.4 2.8e-59 200.7 0.0 1.6 2 0 0 2 2 2 1 Glycosyl hydrolases family 2, TIM barrel domain Glyco_hydro_2_N PF02837.18 NODE_24896_length_842_cov_3.639405_g19404_i0forward_frame_1 - 8e-09 35.6 0.0 1.9e-08 34.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyl hydrolases family 2, sugar binding domain Glyco_hydro_2 PF00703.21 NODE_24896_length_842_cov_3.639405_g19404_i0forward_frame_1 - 5.3e-07 30.3 0.1 2e-06 28.4 0.1 1.9 1 1 0 1 1 1 1 Glycosyl hydrolases family 2 zf-C2H2 PF00096.26 NODE_24880_length_842_cov_144.019827_g19388_i0forward_frame_1 - 0.0043 17.4 0.3 0.017 15.6 0.3 2.1 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_24880_length_842_cov_144.019827_g19388_i0forward_frame_1 - 0.014 16.2 0.2 0.06 14.2 0.2 2.1 1 0 0 1 1 1 0 C2H2-type zinc finger DUF3776 PF12618.8 NODE_24880_length_842_cov_144.019827_g19388_i0forward_frame_1 - 0.14 12.7 2.2 0.22 12.1 2.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3776) ATP-grasp_3 PF02655.14 NODE_24846_length_843_cov_170.025990_g17588_i1reverse_frame_1 - 2.7e-08 34.0 0.0 5.4e-08 33.1 0.0 1.5 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 NODE_24846_length_843_cov_170.025990_g17588_i1reverse_frame_1 - 5.9e-07 29.2 0.0 0.0028 17.2 0.0 2.2 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.6 NODE_24846_length_843_cov_170.025990_g17588_i1reverse_frame_1 - 0.00036 20.3 0.0 0.0032 17.2 0.0 2.4 2 2 1 3 3 3 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.22 NODE_24846_length_843_cov_170.025990_g17588_i1reverse_frame_1 - 0.0045 16.6 0.0 0.0073 15.9 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Meckelin PF09773.9 NODE_24846_length_843_cov_170.025990_g17588_i1reverse_frame_1 - 0.1 10.7 0.0 0.13 10.4 0.0 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) ATP-grasp_4 PF13535.6 NODE_24846_length_843_cov_170.025990_g17588_i1reverse_frame_1 - 0.12 12.0 0.0 1.3 8.7 0.0 2.1 1 1 1 2 2 2 0 ATP-grasp domain Phage_TAC_1 PF06222.11 NODE_24832_length_844_cov_2.207664_g19352_i0reverse_frame_2 - 0.085 12.6 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 Phage tail assembly chaperone Bacteriocin_IId PF09221.10 NODE_24824_length_844_cov_67.782447_g19344_i0forward_frame_3 - 0.045 13.9 0.3 0.068 13.4 0.3 1.2 1 0 0 1 1 1 0 Bacteriocin class IId cyclical uberolysin-like 4HPAD_g_N PF18671.1 NODE_24710_length_846_cov_2326.691739_g78_i20reverse_frame_3 - 0.14 11.9 0.1 0.25 11.1 0.1 1.4 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal 4HPAD_g_N PF18671.1 NODE_24709_length_846_cov_2349.725031_g78_i19forward_frame_3 - 0.14 11.9 0.1 0.25 11.1 0.1 1.4 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal DUF3021 PF11457.8 ORF95426 - 0.02 15.2 6.9 0.03 14.7 6.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF2776 PF10951.8 ORF95426 - 0.051 12.8 4.6 0.072 12.3 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) TMEM208_SND2 PF05620.11 ORF95426 - 0.18 11.6 4.3 0.41 10.4 4.3 1.7 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 HA2 PF04408.23 ORF95426 - 0.32 11.3 2.5 1.1 9.6 2.5 2.0 1 1 0 1 1 1 0 Helicase associated domain (HA2) EOS1 PF12326.8 ORF95426 - 0.56 10.1 3.3 1.5 8.7 3.3 1.9 1 1 0 1 1 1 0 N-glycosylation protein DUF3086 PF11285.8 ORF95426 - 0.69 9.0 5.8 0.29 10.2 2.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3086) 2OG-FeII_Oxy_5 PF13759.6 ORF94790 - 2e-12 47.4 0.0 4.8e-11 43.0 0.0 2.3 1 1 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase Cupin_2 PF07883.11 ORF94790 - 0.011 15.5 0.5 0.12 12.1 0.0 2.4 2 0 0 2 2 2 0 Cupin domain DUF4296 PF14129.6 ORF91790 - 0.045 14.3 1.2 0.58 10.8 0.2 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4296) Sec20 PF03908.13 ORF91790 - 0.13 12.2 4.8 0.75 9.8 0.1 2.9 2 1 0 2 2 2 0 Sec20 DnaI_N PF07319.11 ORF91790 - 0.23 12.1 6.0 0.91 10.2 0.2 3.1 2 2 1 3 3 3 0 Primosomal protein DnaI N-terminus Peptidase_M3_N PF08439.10 ORF91790 - 0.32 11.3 0.2 0.32 11.3 0.2 3.0 3 0 0 3 3 3 0 Oligopeptidase F PET PF06297.14 ORF91790 - 0.37 11.1 1.7 0.52 10.7 0.1 2.0 2 0 0 2 2 2 0 PET Domain Spc7 PF08317.11 ORF91790 - 0.39 9.6 20.2 0.28 10.0 6.0 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein Allexi_40kDa PF05549.11 ORF91790 - 2.6 7.5 7.1 0.51 9.8 1.9 2.1 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF1002 PF06207.11 ORF91790 - 3.5 7.1 13.6 0.34 10.4 3.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1002) WD40_alt PF14077.6 ORF827 - 0.14 12.0 1.1 0.3 11.0 1.1 1.6 1 0 0 1 1 1 0 Alternative WD40 repeat motif Pribosyltran PF00156.27 ORF82343 - 2e-05 24.2 0.0 3e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain DUF543 PF04418.12 ORF8053 - 1.4 9.0 5.4 6.1 6.9 0.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF543) zf-B_box PF00643.24 ORF79853 - 4.1e-09 36.4 2.0 7.6e-09 35.6 2.0 1.5 1 0 0 1 1 1 1 B-box zinc finger Laminin_II PF06009.12 ORF79853 - 0.0013 18.7 2.3 0.56 10.2 0.2 2.4 1 1 1 2 2 2 2 Laminin Domain II NPV_P10 PF05531.12 ORF79853 - 0.0017 18.8 1.2 0.37 11.3 0.3 2.6 2 0 0 2 2 2 1 Nucleopolyhedrovirus P10 protein DUF4736 PF15883.5 ORF79853 - 0.005 16.6 0.7 0.0094 15.7 0.7 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4736) TssO PF17561.2 ORF79853 - 0.014 15.5 15.3 0.015 15.4 5.5 2.4 1 1 1 2 2 2 0 Type VI secretion system, TssO DUF3287 PF11690.8 ORF79853 - 0.054 13.2 1.5 0.54 10.0 0.1 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF3287) DUF948 PF06103.11 ORF79853 - 0.19 12.0 0.5 23 5.3 0.1 2.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) SlyX PF04102.12 ORF79853 - 0.2 12.3 0.9 1.5 9.5 0.2 2.3 2 0 0 2 2 2 0 SlyX EMP24_GP25L PF01105.24 ORF79853 - 0.23 11.4 7.0 0.4 10.6 0.7 2.5 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD DUF1664 PF07889.12 ORF79853 - 0.33 11.0 6.3 6.9 6.7 0.3 2.9 2 1 0 3 3 3 0 Protein of unknown function (DUF1664) BAG PF02179.16 ORF79853 - 0.33 11.4 7.8 1.3 9.5 3.7 3.2 2 1 0 2 2 2 0 BAG domain DUF848 PF05852.11 ORF79853 - 0.46 10.6 9.1 1.4 9.0 2.1 2.4 1 1 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) CENP-F_leu_zip PF10473.9 ORF79853 - 0.75 9.8 7.9 0.32 11.0 4.0 2.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YtxH PF12732.7 ORF79853 - 1 9.9 5.4 22 5.7 5.4 2.8 1 1 0 1 1 1 0 YtxH-like protein Wtap PF17098.5 ORF79853 - 1.4 8.9 6.3 6.8 6.6 0.2 2.5 2 1 0 2 2 2 0 WTAP/Mum2p family Sec8_exocyst PF04048.14 ORF79853 - 3.2 7.7 9.0 4.5 7.2 0.1 2.8 2 1 0 2 2 2 0 Sec8 exocyst complex component specific domain DUF2205 PF10224.9 ORF79853 - 3.8 7.6 8.9 16 5.6 1.3 3.0 1 1 1 2 2 2 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF79853 - 7 7.1 10.5 48 4.5 0.6 3.7 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) FA_desaturase PF00487.24 ORF77807 - 2.5e-35 122.6 20.3 2.8e-35 122.4 20.3 1.0 1 0 0 1 1 1 1 Fatty acid desaturase BPD_transp_1 PF00528.22 ORF7440 - 2.2e-22 79.7 18.2 2.2e-22 79.7 18.2 2.1 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Aconitase PF00330.20 ORF7440 - 0.19 10.7 0.2 0.27 10.2 0.2 1.1 1 0 0 1 1 1 0 Aconitase family (aconitate hydratase) Ion_trans_2 PF07885.16 ORF72440 - 3.3e-13 49.4 1.6 6.2e-13 48.5 1.6 1.4 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF72440 - 2.9e-09 36.5 1.9 3e-09 36.5 0.9 1.5 2 0 0 2 2 2 1 Ion transport protein cNMP_binding PF00027.29 ORF72440 - 1.3e-05 25.2 0.0 2.1e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF2162 PF09930.9 ORF72440 - 0.066 12.6 0.0 0.097 12.1 0.0 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) IRK PF01007.20 ORF72440 - 0.081 12.7 0.4 0.14 11.9 0.4 1.4 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain EF-hand_7 PF13499.6 ORF70551 - 1.1e-05 25.8 0.3 2.1 8.9 0.0 3.6 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF70551 - 0.0014 18.0 0.1 0.48 10.1 0.0 3.4 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF70551 - 0.031 14.2 0.3 16 5.7 0.0 3.6 4 0 0 4 4 4 0 EF-hand domain Helicase_C PF00271.31 ORF68536 - 5.8e-09 36.3 0.2 1.5e-08 35.0 0.2 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain TruD PF01142.18 ORF68536 - 0.02 13.7 1.2 0.036 12.9 1.1 1.4 2 0 0 2 2 2 0 tRNA pseudouridine synthase D (TruD) Med29 PF11568.8 ORF68260 - 0.01 16.1 1.5 0.01 16.1 1.5 2.6 1 1 1 2 2 2 0 Mediator complex subunit 29 DUF1043 PF06295.12 ORF68260 - 0.011 15.8 7.9 0.013 15.5 2.2 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) CENP-H PF05837.12 ORF68260 - 0.021 15.2 2.4 0.021 15.2 2.4 3.6 2 1 1 3 3 3 0 Centromere protein H (CENP-H) DUF2203 PF09969.9 ORF68260 - 0.031 15.0 1.4 0.031 15.0 1.4 3.8 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) DUF948 PF06103.11 ORF68260 - 0.037 14.3 15.7 8.3 6.7 4.4 4.7 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) Fungal_trans_2 PF11951.8 ORF68260 - 0.051 12.4 8.1 0.084 11.7 0.4 2.9 1 1 1 2 2 2 0 Fungal specific transcription factor domain Laminin_II PF06009.12 ORF68260 - 0.062 13.3 20.1 0.08 13.0 2.0 4.1 2 1 1 4 4 4 0 Laminin Domain II FTA4 PF13093.6 ORF68260 - 0.079 12.8 13.9 0.58 10.0 0.5 2.3 2 0 0 2 2 2 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 Med9 PF07544.13 ORF68260 - 0.1 12.7 18.9 3.1 8.0 0.5 4.5 2 2 2 4 4 4 0 RNA polymerase II transcription mediator complex subunit 9 Flagellin_N PF00669.20 ORF68260 - 0.26 11.4 0.1 0.26 11.4 0.1 3.1 2 1 1 3 3 3 0 Bacterial flagellin N-terminal helical region BLOC1_2 PF10046.9 ORF68260 - 0.39 11.1 29.4 0.05 13.9 2.9 5.1 2 1 3 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF2284 PF10050.9 ORF68260 - 0.4 10.4 2.5 0.55 10.0 0.4 2.1 2 0 0 2 2 2 0 Predicted metal-binding protein (DUF2284) ISG65-75 PF11727.8 ORF68260 - 0.46 9.7 15.9 0.15 11.2 1.7 2.6 1 1 1 2 2 2 0 Invariant surface glycoprotein Glutaredoxin2_C PF04399.13 ORF68260 - 0.46 10.3 12.5 3.2 7.6 0.9 4.8 2 1 4 6 6 6 0 Glutaredoxin 2, C terminal domain Baculo_VP1054 PF05789.11 ORF68260 - 0.56 9.4 9.2 0.068 12.4 1.4 2.1 1 1 1 2 2 2 0 Baculovirus VP1054 protein DUF4279 PF14106.6 ORF68260 - 0.73 10.1 8.1 4.6 7.5 0.4 3.5 1 1 1 3 3 3 0 Domain of unknown function (DUF4279) Serine_rich PF08824.10 ORF68260 - 0.83 9.6 8.9 0.8 9.7 5.8 2.3 1 1 1 2 2 2 0 Serine rich protein interaction domain DUF29 PF01724.16 ORF68260 - 0.94 9.7 14.1 0.068 13.4 1.3 3.5 1 1 1 3 3 3 0 Domain of unknown function DUF29 DUF745 PF05335.13 ORF68260 - 1 9.0 9.6 4.7 6.9 3.2 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF745) MerR-DNA-bind PF09278.11 ORF68260 - 1.4 9.5 8.6 10 6.7 0.1 3.7 3 0 0 3 3 3 0 MerR, DNA binding Baculo_PEP_C PF04513.12 ORF68260 - 1.5 8.9 15.4 2.5 8.1 0.5 4.0 2 1 2 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus TMPIT PF07851.13 ORF68260 - 1.8 7.7 19.6 0.61 9.3 8.1 2.8 2 1 1 3 3 3 0 TMPIT-like protein Fib_alpha PF08702.10 ORF68260 - 2.5 8.3 26.0 0.043 14.0 4.1 4.3 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family TPR_MLP1_2 PF07926.12 ORF68260 - 3.1 7.9 17.9 0.16 12.1 8.8 3.0 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein DUF1664 PF07889.12 ORF68260 - 3.4 7.7 24.8 5.8 7.0 4.4 4.4 1 1 3 5 5 5 0 Protein of unknown function (DUF1664) RecG_N PF17190.4 ORF68260 - 6.1 7.7 22.7 0.21 12.4 1.8 4.1 2 1 2 4 4 4 0 RecG N-terminal helical domain YtxH PF12732.7 ORF68260 - 7.8 7.1 20.1 10 6.7 6.2 3.8 2 1 0 2 2 2 0 YtxH-like protein DUF4200 PF13863.6 ORF64732 - 0.027 14.9 3.4 0.027 14.9 3.4 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4200) DUF745 PF05335.13 ORF64732 - 0.25 11.0 14.9 0.16 11.7 3.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF745) IFT57 PF10498.9 ORF64732 - 9 5.2 34.6 0.074 12.0 6.7 2.4 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 UPF0061 PF02696.14 ORF61180 - 5.5e-33 114.4 0.0 6.7e-33 114.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, YdiU/UPF0061 family TetR_C_28 PF17937.1 ORF61180 - 0.0089 16.5 1.2 0.023 15.1 1.2 1.8 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain EF-hand_6 PF13405.6 ORF58612 - 1.1e-07 31.2 0.4 1.3e-06 27.8 0.2 2.5 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF58612 - 3.2e-07 29.4 1.1 9.4e-07 28.0 1.1 1.9 1 0 0 1 1 1 1 EF hand Ion_trans PF00520.31 ORF58612 - 1.4e-06 27.7 7.7 2.1e-06 27.1 7.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_8 PF13833.6 ORF58612 - 2.7e-06 27.1 0.2 6.4e-06 25.9 0.2 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF58612 - 2.2e-05 23.7 0.3 4.4e-05 22.8 0.3 1.5 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF58612 - 5.2e-05 23.6 0.6 0.00011 22.6 0.2 1.8 2 0 0 2 2 2 1 EF-hand domain pair Caleosin PF05042.13 ORF58612 - 0.043 13.7 0.1 0.14 12.0 0.1 1.9 1 1 0 1 1 1 0 Caleosin related protein Adenine_glyco PF03352.13 ORF58612 - 0.049 13.4 0.0 4.9 6.9 0.0 2.2 2 0 0 2 2 2 0 Methyladenine glycosylase CA_like PF10563.9 ORF58612 - 0.079 12.9 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative carbonic anhydrase SieB PF14163.6 ORF58612 - 0.1 12.1 0.0 0.1 12.1 0.0 1.6 2 0 0 2 2 2 0 Super-infection exclusion protein B Ank_2 PF12796.7 ORF5727 - 2.5e-05 24.8 0.0 0.048 14.2 0.0 3.1 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF5727 - 0.0018 18.5 1.6 6.3 7.2 0.1 3.8 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF5727 - 0.0072 16.9 0.0 11 6.7 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeats (many copies) MFS_1 PF07690.16 ORF56886 - 1.9e-09 36.9 21.1 8.6e-07 28.2 16.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Prominin PF05478.11 ORF56886 - 0.18 9.7 1.6 0.25 9.2 1.6 1.1 1 0 0 1 1 1 0 Prominin Trp_oprn_chp PF09534.10 ORF56886 - 1 9.1 10.7 0.21 11.4 6.9 1.8 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) MFS_1_like PF12832.7 ORF56886 - 3.4 6.4 9.3 2.5 6.9 8.0 1.5 1 1 1 2 2 2 0 MFS_1 like family DUF3382 PF11862.8 ORF56886 - 6.5 7.1 14.8 31 4.9 1.5 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF3382) PqiA PF04403.13 ORF55205 - 6.3e-64 214.5 21.4 2.3e-43 147.8 13.3 2.0 2 0 0 2 2 2 2 Paraquat-inducible protein A Lactate_perm PF02652.14 ORF52899 - 2.5e-92 310.3 13.7 3e-92 310.0 13.7 1.0 1 0 0 1 1 1 1 L-lactate permease WAPL PF07814.13 ORF52899 - 0.037 12.8 0.0 0.046 12.5 0.0 1.1 1 0 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin Glycos_transf_3 PF00591.21 ORF51244 - 2.7e-93 312.2 0.5 3.1e-93 312.0 0.5 1.0 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Esterase_phd PF10503.9 ORF49138 - 2.3e-06 27.3 0.0 3.6e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Esterase PHB depolymerase Peptidase_S9 PF00326.21 ORF49138 - 1.8e-05 24.3 0.5 0.00013 21.5 0.0 2.5 4 0 0 4 4 4 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 ORF49138 - 0.00021 21.1 0.0 0.00035 20.5 0.0 1.3 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF49138 - 0.0039 16.8 0.0 0.006 16.2 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.13 ORF49138 - 0.0053 16.7 0.0 0.0072 16.2 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 ORF49138 - 0.0053 15.5 0.0 0.0076 15.0 0.0 1.1 1 0 0 1 1 1 1 Acetyl xylan esterase (AXE1) EcKinase PF02958.20 ORF48380 - 0.028 13.7 0.0 0.04 13.2 0.0 1.3 1 0 0 1 1 1 0 Ecdysteroid kinase RL10P_insert PF17777.1 ORF4548 - 4.3e-17 61.9 0.1 1.5e-16 60.1 0.0 1.9 2 0 0 2 2 2 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 ORF4548 - 5.7e-13 49.3 12.1 2.8e-12 47.1 12.3 2.0 2 0 0 2 2 2 1 60s Acidic ribosomal protein Ribosomal_L10 PF00466.20 ORF4548 - 7.5e-06 26.0 0.0 7.5e-06 26.0 0.0 2.0 2 0 0 2 2 2 1 Ribosomal protein L10 Ribonuc_L-PSP PF01042.21 ORF4548 - 0.01 15.8 0.0 0.023 14.7 0.0 1.7 1 0 0 1 1 1 0 Endoribonuclease L-PSP DUF3021 PF11457.8 ORF43629 - 0.02 15.2 6.9 0.03 14.7 6.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF2776 PF10951.8 ORF43629 - 0.051 12.8 4.6 0.072 12.3 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) TMEM208_SND2 PF05620.11 ORF43629 - 0.18 11.6 4.3 0.41 10.4 4.3 1.7 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 HA2 PF04408.23 ORF43629 - 0.29 11.4 2.3 0.34 11.2 0.5 2.0 1 1 1 2 2 2 0 Helicase associated domain (HA2) EOS1 PF12326.8 ORF43629 - 0.33 10.9 2.1 0.63 9.9 2.1 1.7 1 1 0 1 1 1 0 N-glycosylation protein DUF3086 PF11285.8 ORF43629 - 0.47 9.5 5.0 0.29 10.2 2.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3086) Aldo_ket_red PF00248.21 ORF42954 - 8.6e-34 117.1 0.4 3.2e-32 111.9 0.4 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family ALIX_LYPXL_bnd PF13949.6 ORF38571 - 9e-28 97.4 0.4 9e-28 97.4 0.4 1.8 2 1 0 2 2 2 1 ALIX V-shaped domain binding to HIV BRO1 PF03097.18 ORF38571 - 0.001 18.0 0.0 0.0013 17.6 0.0 1.2 1 0 0 1 1 1 1 BRO1-like domain DUF4296 PF14129.6 ORF31975 - 0.045 14.3 1.2 0.58 10.8 0.2 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4296) Sec20 PF03908.13 ORF31975 - 0.13 12.2 4.8 0.75 9.8 0.1 2.9 2 1 0 2 2 2 0 Sec20 DnaI_N PF07319.11 ORF31975 - 0.23 12.1 6.0 0.91 10.2 0.2 3.1 2 2 1 3 3 3 0 Primosomal protein DnaI N-terminus Peptidase_M3_N PF08439.10 ORF31975 - 0.32 11.3 0.2 0.32 11.3 0.2 3.0 3 0 0 3 3 3 0 Oligopeptidase F PET PF06297.14 ORF31975 - 0.37 11.1 1.7 0.52 10.7 0.1 2.0 2 0 0 2 2 2 0 PET Domain Spc7 PF08317.11 ORF31975 - 0.39 9.6 20.2 0.28 10.0 6.0 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein Allexi_40kDa PF05549.11 ORF31975 - 2.6 7.5 7.1 0.51 9.8 1.9 2.1 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF1002 PF06207.11 ORF31975 - 3.5 7.1 13.6 0.34 10.4 3.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1002) HNF-1_N PF04814.13 ORF28811 - 0.18 12.4 0.5 1.3 9.6 0.1 2.1 2 0 0 2 2 2 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus PTS_2-RNA PF01885.16 ORF2692 - 7.1e-05 22.9 0.0 9.9e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family MIP PF00230.20 ORF18436 - 1.6e-77 260.2 12.7 1.9e-77 260.0 12.7 1.0 1 0 0 1 1 1 1 Major intrinsic protein Phage_holin_5_2 PF16079.5 ORF18436 - 0.56 10.6 0.0 0.56 10.6 0.0 4.0 2 2 2 5 5 5 0 Phage holin family Hol44, in holin superfamily V Helicase_C PF00271.31 ORF17565 - 2.5e-29 101.9 0.0 1e-28 99.9 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF17565 - 3e-20 72.7 0.0 4.7e-20 72.1 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase CMS1 PF14617.6 ORF17565 - 0.0011 18.4 0.0 0.006 16.0 0.0 1.9 2 0 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit NDK PF00334.19 ORF17565 - 0.0063 16.5 0.1 1.8 8.6 0.0 2.3 2 0 0 2 2 2 2 Nucleoside diphosphate kinase ACT_5 PF13710.6 ORF17565 - 0.038 13.8 0.1 0.76 9.7 0.0 2.7 2 0 0 2 2 2 0 ACT domain tRNA-synt_1b PF00579.25 ORF17565 - 0.044 13.1 0.0 0.078 12.3 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) DUF717 PF05338.12 ORF17565 - 0.064 13.4 0.0 10 6.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF717) ERCC3_RAD25_C PF16203.5 ORF17565 - 0.11 11.6 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase CLASP_N PF12348.8 ORF14323 - 1.1e-07 31.7 0.2 3.8e-06 26.6 0.1 2.1 2 0 0 2 2 2 1 CLASP N terminal HEAT PF02985.22 ORF14323 - 9.6e-05 22.3 0.2 0.18 12.2 0.0 4.5 5 0 0 5 5 5 1 HEAT repeat Cnd1 PF12717.7 ORF14323 - 0.00046 20.3 0.1 0.019 15.0 0.0 2.6 2 1 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF14323 - 0.0011 19.5 0.0 1.3 9.7 0.0 3.1 2 1 1 3 3 3 1 Vacuolar 14 Fab1-binding region HEAT_2 PF13646.6 ORF14323 - 0.0096 16.3 0.0 0.53 10.7 0.0 2.9 2 1 1 3 3 3 2 HEAT repeats Dopey_N PF04118.14 ORF14323 - 0.033 13.3 0.0 0.78 8.8 0.0 2.1 2 0 0 2 2 2 0 Dopey, N-terminal DRIM PF07539.12 ORF14323 - 0.08 11.2 0.0 2.9 6.1 0.0 2.3 2 0 0 2 2 2 0 Down-regulated in metastasis TAN PF11640.8 ORF14323 - 0.093 12.9 1.2 0.68 10.0 0.1 2.5 3 0 0 3 3 3 0 Telomere-length maintenance and DNA damage repair Cellulase PF00150.18 ORF1327 - 8e-11 41.9 0.0 1.1e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) FA_desaturase PF00487.24 ORF1258 - 2.5e-35 122.6 20.3 2.8e-35 122.4 20.3 1.0 1 0 0 1 1 1 1 Fatty acid desaturase GUB_WAK_bind PF13947.6 ORF110587 - 1 10.2 6.3 2.7 8.8 0.4 2.7 2 1 0 2 2 2 0 Wall-associated receptor kinase galacturonan-binding S36_mt PF10937.8 ORF110587 - 2.7 9.6 7.2 23 6.6 0.0 2.7 2 1 0 2 2 2 0 Ribosomal protein S36, mitochondrial FA_desaturase PF00487.24 ORF110331 - 2.5e-35 122.6 20.3 2.8e-35 122.4 20.3 1.0 1 0 0 1 1 1 1 Fatty acid desaturase Transket_pyr PF02779.24 ORF109763 - 6e-36 123.8 0.1 9.5e-36 123.1 0.1 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF109763 - 6.4e-28 97.1 0.0 9.6e-28 96.6 0.0 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain PFOR_II PF17147.4 ORF109763 - 0.12 12.7 0.0 0.3 11.4 0.0 1.6 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II WD40 PF00400.32 ORF108639 - 1.7e-15 57.1 1.4 7.5e-06 26.6 0.2 4.7 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF108639 - 2.1e-06 27.9 0.3 0.76 10.1 0.0 5.2 2 2 4 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain Kelch_5 PF13854.6 ORF108639 - 0.0033 17.4 0.6 11 6.1 0.0 3.4 3 0 0 3 3 3 2 Kelch motif Nup160 PF11715.8 ORF108639 - 0.011 14.4 0.0 2.7 6.5 0.0 2.2 2 0 0 2 2 2 0 Nucleoporin Nup120/160 TIMP PF00965.17 ORF108639 - 0.096 12.5 0.0 0.2 11.4 0.0 1.8 1 1 0 1 1 1 0 Tissue inhibitor of metalloproteinase BPD_transp_1 PF00528.22 ORF107459 - 2.5e-14 53.4 20.8 2.5e-14 53.4 20.8 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DnaJ PF00226.31 ORF103363 - 1.4e-10 41.2 0.1 2.8e-10 40.2 0.1 1.5 1 0 0 1 1 1 1 DnaJ domain Rhodanese PF00581.20 ORF103363 - 4e-09 37.0 0.0 7.1e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain GLTT PF01744.20 ORF101360 - 0.027 14.2 1.1 0.1 12.4 1.0 2.0 1 1 0 1 1 1 0 GLTT repeat (6 copies) Methyltransf_23 PF13489.6 ORF101360 - 0.11 12.3 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PQ-loop PF04193.14 ORF101124 - 1.2e-20 73.1 17.4 4.7e-12 45.5 0.7 2.9 3 0 0 3 3 3 2 PQ loop repeat PhyH PF05721.13 ORF10084 - 0.057 13.7 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) Nup35_RRM_2 PF14605.6 NODE_25061_length_838_cov_9.008717_g19536_i0reverse_frame_1 - 3.4e-06 27.0 0.0 6.2e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RRM_1 PF00076.22 NODE_25061_length_838_cov_9.008717_g19536_i0reverse_frame_1 - 0.00012 21.9 0.0 0.00022 21.0 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 NODE_25061_length_838_cov_9.008717_g19536_i0reverse_frame_1 - 0.061 13.2 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Occluded RNA-recognition motif RRM_3 PF08777.11 NODE_25061_length_838_cov_9.008717_g19536_i0reverse_frame_1 - 0.096 12.7 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 RNA binding motif QIL1 PF15884.5 NODE_25056_length_838_cov_96.648817_g19532_i0reverse_frame_1 - 1.3 9.7 0.0 1.3 9.7 0.0 3.2 3 2 1 4 4 4 0 MICOS complex subunit MIC13, QIL1 CENP-B_dimeris PF09026.10 NODE_25022_length_838_cov_13477.250311_g9198_i4forward_frame_1 - 0.0004 20.7 3.9 0.00068 20.0 3.9 1.3 1 0 0 1 1 1 1 Centromere protein B dimerisation domain RXT2_N PF08595.11 NODE_25022_length_838_cov_13477.250311_g9198_i4forward_frame_1 - 0.048 13.7 0.4 0.067 13.2 0.4 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal Mem_trans PF03547.18 NODE_24943_length_840_cov_644.031056_g19441_i0reverse_frame_1 - 0.18 10.2 0.3 0.18 10.1 0.3 1.1 1 0 0 1 1 1 0 Membrane transport protein DUF5424 PF17462.2 NODE_24930_length_841_cov_81.196030_g19431_i0forward_frame_3 - 0.038 13.9 2.3 0.062 13.2 0.5 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5424) YMF19 PF02326.15 NODE_24924_length_841_cov_151.258065_g19425_i0forward_frame_2 - 0.062 14.1 1.9 0.19 12.5 1.9 1.9 1 1 0 1 1 1 0 Plant ATP synthase F0 LRR19-TM PF15176.6 NODE_24911_length_841_cov_549.359801_g19414_i0forward_frame_3 - 0.17 11.9 1.6 18 5.4 0.3 2.3 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks58.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks58.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks58.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks58.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LRR19-TM PF15176.6 NODE_24909_length_841_cov_669.620347_g19413_i0reverse_frame_3 - 0.17 11.9 1.6 18 5.4 0.3 2.3 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain SAM_Ste50p PF09235.10 NODE_24880_length_842_cov_144.019827_g19388_i0forward_frame_3 - 0.18 12.1 0.6 1.7 9.0 0.1 2.2 2 0 0 2 2 2 0 Ste50p, sterile alpha motif FGGY_C PF02782.16 NODE_24859_length_843_cov_3.360149_g19372_i0forward_frame_3 - 6.8e-46 156.5 0.2 9.4e-46 156.0 0.2 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 NODE_24859_length_843_cov_3.360149_g19372_i0forward_frame_3 - 0.012 15.2 0.0 0.016 14.7 0.0 1.2 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain AnmK PF03702.14 NODE_24859_length_843_cov_3.360149_g19372_i0forward_frame_3 - 0.033 13.3 0.0 0.047 12.8 0.0 1.2 1 0 0 1 1 1 0 Anhydro-N-acetylmuramic acid kinase HSP70 PF00012.20 NODE_24859_length_843_cov_3.360149_g19372_i0forward_frame_3 - 0.1 10.8 0.0 0.12 10.5 0.0 1.1 1 0 0 1 1 1 0 Hsp70 protein RRM_occluded PF16842.5 NODE_24856_length_843_cov_36.719059_g19369_i0forward_frame_2 - 0.05 13.5 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Occluded RNA-recognition motif Imm32 PF15566.6 NODE_24855_length_843_cov_69.243812_g19368_i0reverse_frame_3 - 0.11 12.3 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 Immunity protein 32 Pec_lyase_N PF04431.13 NODE_24855_length_843_cov_69.243812_g19368_i0forward_frame_2 - 0.66 10.3 2.5 0.39 11.0 0.5 1.7 2 1 0 2 2 2 0 Pectate lyase, N terminus Aa_trans PF01490.18 ORF99807 - 5.5e-39 134.0 27.6 6.2e-39 133.9 27.6 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein PPR_2 PF13041.6 ORF9840 - 8.3e-39 131.6 0.0 4.5e-10 39.6 0.0 5.6 3 2 3 6 6 6 6 PPR repeat family PPR_3 PF13812.6 ORF9840 - 1.3e-32 111.7 0.0 7.6e-11 41.9 0.0 5.6 1 1 4 6 6 6 6 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF9840 - 1.5e-29 101.4 0.0 2.1e-06 27.3 0.0 7.3 6 1 1 7 7 7 7 PPR repeat PPR PF01535.20 ORF9840 - 1.5e-27 93.8 0.0 0.0066 16.6 0.0 7.0 7 0 0 7 7 7 6 PPR repeat PPR_long PF17177.4 ORF9840 - 3.1e-16 59.4 4.1 1.7e-07 30.8 0.2 3.7 1 1 2 3 3 3 2 Pentacotripeptide-repeat region of PRORP B12-binding_2 PF02607.17 ORF9840 - 0.055 13.9 2.8 9.4 6.8 1.1 3.7 2 1 1 3 3 3 0 B12 binding domain VWA_3 PF13768.6 ORF9840 - 0.14 12.1 1.9 1.3 9.0 0.1 2.5 2 1 0 2 2 2 0 von Willebrand factor type A domain TPR_14 PF13428.6 ORF9840 - 0.15 12.9 26.2 1.3 10.0 2.8 5.9 4 2 3 7 7 7 0 Tetratricopeptide repeat DUF3502 PF12010.8 ORF9840 - 0.17 12.5 0.1 1.6 9.4 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF3502) Wzy_C_2 PF11846.8 ORF9840 - 4.2 7.2 11.7 2.3 8.1 2.1 3.6 2 2 2 5 5 5 0 Virulence factor membrane-bound polymerase, C-terminal RsmJ PF04378.13 ORF96703 - 4e-119 396.3 0.0 4.7e-119 396.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA large subunit methyltransferase D, RlmJ Cons_hypoth95 PF03602.15 ORF96703 - 0.0019 17.9 0.0 0.12 12.0 0.0 2.5 3 0 0 3 3 3 2 Conserved hypothetical protein 95 TonB_dep_Rec PF00593.24 ORF955 - 9.2e-50 170.9 11.8 1.1e-49 170.6 11.8 1.0 1 0 0 1 1 1 1 TonB dependent receptor OMP_b-brl_3 PF14905.6 ORF955 - 5.5e-11 42.1 0.1 6.6e-11 41.8 0.1 1.1 1 0 0 1 1 1 1 Outer membrane protein beta-barrel family C2 PF00168.30 ORF94295 - 2.3e-16 59.9 0.0 3.8e-16 59.3 0.0 1.3 1 0 0 1 1 1 1 C2 domain WWE PF02825.20 ORF93188 - 3.2e-06 27.6 0.1 0.0014 19.1 0.0 2.5 2 0 0 2 2 2 2 WWE domain PmbA_TldD PF01523.16 ORF93188 - 0.014 15.2 0.0 0.018 14.9 0.0 1.1 1 0 0 1 1 1 0 Putative modulator of DNA gyrase MORN PF02493.20 ORF9279 - 2.6e-58 190.6 68.9 8.3e-08 31.7 0.6 10.3 10 0 0 10 10 10 10 MORN repeat Tudor_2 PF18104.1 ORF9279 - 4.3 7.1 15.1 8.5 6.1 0.4 5.1 5 0 0 5 5 5 0 Jumonji domain-containing protein 2A Tudor domain CwfJ_C_2 PF04676.14 ORF91565 - 5.8e-18 65.6 0.0 1.6e-17 64.2 0.0 1.8 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 2 CwfJ_C_1 PF04677.15 ORF91565 - 9e-16 57.8 0.3 1.5e-15 57.2 0.3 1.2 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 DSPc PF00782.20 ORF91301 - 8.3e-12 45.1 0.0 1.3e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain CBM_20 PF00686.19 ORF91301 - 0.031 14.2 0.0 0.05 13.5 0.0 1.3 1 0 0 1 1 1 0 Starch binding domain Macoilin PF09726.9 ORF87440 - 0.18 10.4 14.3 0.18 10.3 14.3 1.1 1 0 0 1 1 1 0 Macoilin family PPR_3 PF13812.6 ORF87397 - 1.8e-10 40.7 0.1 2.8e-05 24.1 0.0 4.7 3 2 2 5 5 5 3 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF87397 - 6.8e-09 35.8 1.0 0.016 15.4 0.0 4.6 3 2 2 5 5 5 3 PPR repeat family PPR PF01535.20 ORF87397 - 7.8e-09 35.2 6.1 0.13 12.6 0.1 4.9 5 0 0 5 5 5 3 PPR repeat PPR_long PF17177.4 ORF87397 - 1.4e-07 31.1 1.1 0.008 15.6 0.1 3.2 2 1 1 3 3 3 2 Pentacotripeptide-repeat region of PRORP KIAA1430 PF13879.6 ORF84597 - 7.6e-17 62.0 16.0 7.6e-17 62.0 16.0 2.4 2 1 0 2 2 2 1 KIAA1430 homologue CtaG_Cox11 PF04442.14 ORF84597 - 6.2 6.8 6.5 13 5.8 0.2 2.4 1 1 0 2 2 2 0 Cytochrome c oxidase assembly protein CtaG/Cox11 Ank_3 PF13606.6 ORF84245 - 0.0053 17.2 0.1 0.043 14.4 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF84245 - 0.0065 17.0 0.0 0.22 12.2 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF84245 - 0.01 16.4 0.0 0.22 12.2 0.0 2.9 3 1 0 3 3 3 0 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF84245 - 0.13 12.6 0.0 0.38 11.1 0.0 1.8 1 0 0 1 1 1 0 Ankyrin repeats (many copies) RNA_polI_A14 PF08203.11 ORF84245 - 0.91 10.3 0.1 0.91 10.3 0.1 2.5 3 1 0 3 3 3 0 Yeast RNA polymerase I subunit RPA14 DUF1690 PF07956.11 ORF84245 - 4.6 7.7 9.8 0.22 11.9 3.8 1.8 2 0 0 2 2 2 0 Protein of Unknown function (DUF1690) TbpB_A PF17484.2 ORF84245 - 8.3 7.2 8.2 9.8 6.9 0.6 2.3 2 0 0 2 2 2 0 N-Lobe handle Tf-binding protein B PhoLip_ATPase_N PF16209.5 ORF82894 - 3.2e-16 58.8 0.8 7e-16 57.7 0.8 1.5 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 ORF82894 - 0.0011 18.5 0.0 0.0024 17.4 0.0 1.5 1 0 0 1 1 1 1 E1-E2 ATPase Fil_haemagg PF05594.14 ORF81723 - 0.069 13.7 50.8 1.8e+04 -16.5 50.8 3.6 1 1 0 1 1 1 0 Haemagluttinin repeat Trp_oprn_chp PF09534.10 ORF81723 - 5.2 6.8 37.8 5.2 6.8 8.5 2.6 1 1 2 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Helicase_C PF00271.31 ORF80527 - 1.5e-19 70.3 0.0 2.4e-19 69.7 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF80527 - 0.0075 15.5 0.0 0.0092 15.2 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Metallophos PF00149.28 ORF80357 - 3.4e-14 53.8 0.1 8.9e-14 52.5 0.1 1.8 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF80357 - 0.00016 21.9 0.0 0.00023 21.4 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain FBPase_2 PF06874.11 ORF80357 - 0.12 10.7 0.1 0.22 9.8 0.1 1.4 1 1 1 2 2 2 0 Firmicute fructose-1,6-bisphosphatase TMEM223 PF14640.6 ORF78607 - 0.017 15.3 0.1 0.077 13.2 0.1 2.1 1 1 0 1 1 1 0 Transmembrane protein 223 Kinesin PF00225.23 ORF78186 - 3.3e-91 305.7 0.8 3.9e-91 305.4 0.8 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF78186 - 7.6e-05 22.7 0.0 0.00014 21.8 0.0 1.5 1 0 0 1 1 1 1 Microtubule binding Kinesin_assoc PF16183.5 ORF78186 - 0.024 14.8 0.8 0.12 12.5 0.0 2.1 2 0 0 2 2 2 0 Kinesin-associated HR1 PF02185.16 ORF78186 - 0.059 13.5 4.2 0.3 11.2 0.2 2.5 2 0 0 2 2 2 0 Hr1 repeat Barstar PF01337.18 ORF76791 - 0.064 13.3 0.2 0.32 11.0 0.1 2.3 2 0 0 2 2 2 0 Barstar (barnase inhibitor) DUF2407_C PF13373.6 ORF76791 - 0.093 12.9 1.0 0.18 12.0 1.0 1.4 1 0 0 1 1 1 0 DUF2407 C-terminal domain RecG_N PF17190.4 ORF76791 - 4 8.2 11.9 0.58 10.9 0.8 3.6 2 1 2 4 4 4 0 RecG N-terminal helical domain MatE PF01554.18 ORF74361 - 2.2e-18 66.4 6.2 8.4e-18 64.5 5.8 2.0 2 0 0 2 2 2 1 MatE VPDSG-CTERM PF18205.1 ORF74361 - 0.0085 15.9 0.1 0.034 13.9 0.1 2.1 1 0 0 1 1 1 1 VPDSG-CTERM motif DUF3792 PF12670.7 ORF74361 - 0.016 15.4 1.6 0.016 15.4 1.6 2.8 4 1 0 4 4 4 0 Protein of unknown function (DUF3792) Sugar_tr PF00083.24 ORF73693 - 2.3e-11 43.2 0.3 3.1e-11 42.8 0.3 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF73693 - 5.3e-10 38.8 0.9 6.6e-10 38.4 0.9 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Asp PF00026.23 ORF73021 - 6.9e-32 111.1 0.0 8e-32 110.9 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF73021 - 0.0087 15.8 0.0 0.67 9.7 0.0 2.1 1 1 1 2 2 2 2 Xylanase inhibitor C-terminal PP-binding PF00550.25 ORF71104 - 9.2e-09 35.5 0.1 1.5e-08 34.8 0.1 1.3 1 0 0 1 1 1 1 Phosphopantetheine attachment site Kinesin PF00225.23 ORF69723 - 4.4e-67 226.4 6.8 5.1e-67 226.2 6.8 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF69723 - 0.0044 17.0 1.4 0.0073 16.3 0.2 2.0 2 1 0 2 2 2 1 Microtubule binding Csd3_N PF18059.1 ORF69723 - 0.056 14.0 0.4 0.18 12.3 0.4 1.9 1 0 0 1 1 1 0 Csd3 N-terminal PAH PF02671.21 ORF69723 - 0.22 11.7 1.0 0.56 10.4 0.8 2.0 2 1 0 2 2 2 0 Paired amphipathic helix repeat Recep_L_domain PF01030.24 ORF69285 - 0.36 11.0 4.9 0.31 11.2 0.4 2.6 2 1 0 3 3 3 0 Receptor L domain tRNA-synt_1c PF00749.21 ORF6901 - 5.1e-37 127.4 0.0 1e-36 126.4 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain HTH_15 PF12324.8 ORF6901 - 0.003 17.5 0.2 0.035 14.1 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of alkylmercury lyase adh_short_C2 PF13561.6 ORF67648 - 9.4e-61 205.3 0.2 1.2e-60 205.0 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF67648 - 2.2e-51 174.1 0.1 2.6e-51 173.8 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 ORF67648 - 7.5e-08 32.1 0.0 1.2e-07 31.4 0.0 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family KR PF08659.10 ORF67648 - 1.3e-07 31.7 0.2 2.7e-07 30.7 0.2 1.5 1 1 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 ORF67648 - 0.001 18.4 0.0 0.0023 17.3 0.0 1.7 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GDP_Man_Dehyd PF16363.5 ORF67648 - 0.014 14.8 0.0 1.9 7.8 0.0 2.2 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase Pyr_redox PF00070.27 ORF67648 - 0.028 15.0 0.0 0.074 13.6 0.0 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ADH_zinc_N PF00107.26 ORF67648 - 0.091 12.7 0.2 0.23 11.4 0.2 1.8 1 1 0 1 1 1 0 Zinc-binding dehydrogenase RIB43A PF05914.12 ORF67467 - 4.8e-27 94.7 33.8 6.1e-27 94.3 33.8 1.0 1 0 0 1 1 1 1 RIB43A Metal_resist PF13801.6 ORF67467 - 0.017 15.3 4.3 0.017 15.3 4.3 3.5 3 1 1 4 4 4 0 Heavy-metal resistance TRAM_2 PF18693.1 ORF66598 - 1.3e-21 76.5 1.1 2.2e-21 75.8 1.1 1.4 1 0 0 1 1 1 1 TRAM domain Radical_SAM PF04055.21 ORF66598 - 2.8e-21 76.6 0.0 7.2e-21 75.3 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily TRAM PF01938.20 ORF66598 - 0.0015 18.5 0.1 0.0027 17.6 0.1 1.5 1 0 0 1 1 1 1 TRAM domain CoA_binding PF02629.19 ORF66598 - 0.11 13.2 0.0 13 6.6 0.0 2.4 1 1 1 2 2 2 0 CoA binding domain ACP_syn_III PF08545.10 ORF66598 - 0.19 11.6 0.0 0.41 10.5 0.0 1.5 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Snurportin1 PF11538.8 ORF66598 - 1 9.6 2.7 6.8 7.0 0.8 2.5 2 0 0 2 2 2 0 Snurportin1 Steroid_dh PF02544.16 ORF66415 - 2e-37 128.5 8.5 4e-37 127.5 8.5 1.5 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ubiquitin PF00240.23 ORF66415 - 0.0098 15.6 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin family YukD PF08817.10 ORF66415 - 0.019 15.6 0.0 0.03 15.0 0.0 1.3 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD PDR_assoc PF08370.11 ORF66415 - 0.18 11.6 0.2 0.18 11.6 0.2 3.1 3 1 0 3 3 3 0 Plant PDR ABC transporter associated UN_NPL4 PF11543.8 ORF66415 - 0.22 12.0 0.1 0.33 11.5 0.1 1.3 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Methyltransf_5 PF01795.19 ORF66404 - 1e-39 136.9 0.0 1.8e-39 136.1 0.0 1.4 1 1 0 1 1 1 1 MraW methylase family IBR PF01485.21 ORF6599 - 0.0051 17.0 16.1 0.0096 16.1 16.1 1.4 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain UVR PF02151.19 ORF60350 - 0.0034 17.1 3.5 0.0034 17.1 3.5 2.4 2 0 0 2 2 2 1 UvrB/uvrC motif bZIP_2 PF07716.15 ORF60350 - 4.9 7.3 13.5 0.15 12.2 2.7 2.7 2 0 0 2 2 2 0 Basic region leucine zipper Alpha-amylase_C PF02806.18 ORF58313 - 5.7e-19 68.4 0.2 9.4e-19 67.7 0.2 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain DUF4309 PF14172.6 ORF58313 - 0.016 15.2 0.0 0.027 14.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) DNA_methylase PF00145.17 ORF58190 - 2.5e-28 99.4 0.0 6.9e-28 97.9 0.0 1.6 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase WW PF00397.26 ORF58125 - 2.2e-61 203.6 50.5 4.2e-14 52.3 3.0 6.1 6 0 0 6 6 6 6 WW domain Mustang PF15682.5 ORF58125 - 3.2e-07 30.4 11.5 2 8.6 0.1 5.2 5 0 0 5 5 5 4 Musculoskeletal, temporally activated-embryonic nuclear protein 1 Iron_transport PF10634.9 ORF58125 - 0.047 13.9 0.9 74 3.5 0.0 3.8 4 0 0 4 4 4 0 Fe2+ transport protein RtxA PF07634.11 ORF58125 - 0.051 14.1 1.5 1.1e+02 3.7 0.0 4.8 5 0 0 5 5 5 0 RtxA repeat Arm-DNA-bind_1 PF09003.10 ORF58125 - 0.19 11.9 2.6 22 5.3 0.0 3.6 4 0 0 4 4 4 0 Bacteriophage lambda integrase, Arm DNA-binding domain 2OG-FeII_Oxy PF03171.20 ORF57674 - 1.2e-12 48.2 0.0 1.9e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DIOX_N PF14226.6 ORF57674 - 0.0018 19.0 0.0 0.0032 18.2 0.0 1.4 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal VWA_2 PF13519.6 ORF57244 - 9.6e-09 35.8 0.4 2.1e-06 28.3 0.2 2.8 1 1 1 2 2 2 2 von Willebrand factor type A domain VWA PF00092.28 ORF57244 - 1.2e-05 25.6 2.4 0.019 15.2 0.4 3.1 2 1 0 2 2 2 2 von Willebrand factor type A domain zf-Sec23_Sec24 PF04810.15 ORF57244 - 7.7e-05 22.7 0.5 0.00017 21.6 0.5 1.6 1 0 0 1 1 1 1 Sec23/Sec24 zinc finger Sec23_trunk PF04811.15 ORF57244 - 0.00086 18.9 0.1 0.0047 16.5 0.1 2.0 1 1 0 1 1 1 1 Sec23/Sec24 trunk domain Inhibitor_I71 PF12628.7 ORF57244 - 0.028 14.2 1.5 0.096 12.5 0.2 2.3 2 2 0 2 2 2 0 Falstatin, cysteine peptidase inhibitor VWA_CoxE PF05762.14 ORF57244 - 0.2 11.0 0.0 1.9 7.8 0.0 2.0 2 0 0 2 2 2 0 VWA domain containing CoxE-like protein DUF3755 PF12579.8 ORF57244 - 6.7 6.4 6.9 0.82 9.4 1.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3755) Glyco_transf_11 PF01531.16 ORF56267 - 0.0082 15.4 0.0 0.012 14.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 11 Ank_2 PF12796.7 ORF56097 - 4.6e-22 78.4 3.3 3.6e-07 30.7 0.1 3.2 3 0 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF56097 - 1.3e-16 60.8 4.2 0.0014 19.1 0.0 5.3 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF56097 - 6.1e-15 54.9 7.2 0.00067 20.0 0.2 6.8 7 0 0 7 7 7 4 Ankyrin repeat Ank_5 PF13857.6 ORF56097 - 7.4e-15 54.8 7.5 4.4e-06 26.9 0.3 5.6 3 2 3 6 6 6 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF56097 - 2.3e-14 52.1 3.9 0.00075 19.8 0.1 6.3 6 0 0 6 6 6 2 Ankyrin repeat Glu_cyclase_2 PF05096.12 ORF55217 - 2.4e-32 112.4 0.0 2.9e-32 112.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine cyclotransferase ABC_membrane PF00664.23 ORF55217 - 0.064 12.9 0.1 0.092 12.4 0.1 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region Mito_carr PF00153.27 ORF5399 - 4.8e-62 205.9 0.2 3.3e-23 81.4 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein PP2C PF00481.21 ORF51963 - 1.6e-25 90.2 0.9 3.3e-25 89.2 0.0 1.8 2 0 0 2 2 2 1 Protein phosphatase 2C CMAS PF02353.20 ORF49702 - 2.3e-71 240.3 0.4 2.6e-71 240.1 0.4 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 ORF49702 - 1.5e-15 57.6 0.0 2.8e-15 56.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF49702 - 7.8e-14 52.1 0.0 1.6e-13 51.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF49702 - 3.9e-11 43.1 0.1 7e-11 42.2 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF49702 - 6.6e-09 36.4 0.0 1.1e-08 35.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF49702 - 5.5e-08 32.7 0.0 7.3e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF49702 - 0.00032 20.3 0.0 0.00051 19.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 ORF49702 - 0.002 17.9 0.0 0.0026 17.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.12 ORF49702 - 0.0027 17.3 0.0 0.0043 16.7 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TPMT PF05724.11 ORF49702 - 0.0046 16.7 0.0 0.046 13.4 0.0 2.1 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_PK PF05891.12 ORF49702 - 0.0046 16.5 0.0 0.0067 16.0 0.0 1.2 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Methyltransf_3 PF01596.17 ORF49702 - 0.013 14.7 0.0 0.03 13.5 0.0 1.5 1 1 0 1 1 1 0 O-methyltransferase RrnaAD PF00398.20 ORF49702 - 0.014 14.4 0.0 0.023 13.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase GCD14 PF08704.10 ORF49702 - 0.016 14.9 0.0 0.028 14.1 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_32 PF13679.6 ORF49702 - 0.04 13.9 0.0 0.069 13.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DOT1 PF08123.13 ORF49702 - 0.062 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 NodS PF05401.11 ORF49702 - 0.086 12.4 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_2 PF00891.18 ORF49702 - 0.11 11.8 0.0 0.3 10.3 0.0 1.7 1 1 0 1 1 1 0 O-methyltransferase domain FtsJ PF01728.19 ORF49702 - 0.14 12.3 0.0 0.29 11.2 0.0 1.6 1 1 0 1 1 1 0 FtsJ-like methyltransferase Fil_haemagg PF05594.14 ORF49059 - 0.069 13.7 50.8 1.8e+04 -16.5 50.8 3.6 1 1 0 1 1 1 0 Haemagluttinin repeat Trp_oprn_chp PF09534.10 ORF49059 - 5.2 6.8 37.8 5.2 6.8 8.5 2.6 1 1 2 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF4586 PF15239.6 ORF39445 - 2.9e-22 80.3 15.3 1.1e-21 78.4 15.3 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4586) DEK_C PF08766.11 ORF39363 - 8.4e-05 22.4 0.0 0.00014 21.7 0.0 1.3 1 0 0 1 1 1 1 DEK C terminal domain Tubulin PF00091.25 ORF39363 - 0.18 12.0 0.0 0.36 11.0 0.0 1.5 1 1 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain SRP68 PF16969.5 ORF37568 - 8e-16 58.1 10.3 9.1e-16 58.0 10.3 1.0 1 0 0 1 1 1 1 RNA-binding signal recognition particle 68 PI_PP_C PF18365.1 ORF37568 - 0.0079 16.2 0.7 0.026 14.5 0.2 2.2 2 1 0 2 2 2 1 Phosphoinositide phosphatase C-terminal domain Allexi_40kDa PF05549.11 ORF37568 - 0.027 14.0 1.6 0.046 13.2 1.6 1.3 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF1499 PF07386.11 ORF37568 - 0.11 13.0 0.5 0.23 12.0 0.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1499) UDPGT PF00201.18 ORF37010 - 1.3e-17 63.8 0.0 2e-17 63.2 0.0 1.3 1 1 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF37010 - 5.5e-06 26.5 0.0 6.8e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF37010 - 0.025 13.8 0.0 0.039 13.2 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 1 TMEM223 PF14640.6 ORF33614 - 0.017 15.3 0.1 0.077 13.2 0.1 2.1 1 1 0 1 1 1 0 Transmembrane protein 223 Shisa PF13908.6 ORF32500 - 0.8 9.9 4.6 2.3 8.4 0.1 2.5 2 1 1 3 3 3 0 Wnt and FGF inhibitory regulator TRP PF06011.12 ORF32500 - 4.1 6.0 16.3 22 3.6 16.3 2.0 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel KASH_CCD PF14662.6 ORF30417 - 9e-07 28.9 9.6 1.3e-06 28.4 9.6 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DivIC PF04977.15 ORF30417 - 0.18 11.6 7.7 1.2 8.9 0.1 3.1 2 1 1 3 3 3 0 Septum formation initiator TSC22 PF01166.18 ORF30417 - 4.2 7.8 7.4 14 6.0 1.2 3.1 2 1 1 3 3 3 0 TSC-22/dip/bun family GIT_CC PF16559.5 ORF30417 - 5.1 7.0 8.1 3 7.8 3.0 2.8 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor EF-hand_1 PF00036.32 ORF28199 - 5.8e-09 34.9 1.0 1.8e-05 23.9 0.5 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF28199 - 7.5e-08 31.7 0.5 0.00021 21.0 0.8 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF28199 - 1.2e-07 31.5 0.1 2.8e-07 30.3 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF28199 - 5.9e-07 29.8 0.6 0.00016 22.1 0.3 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF28199 - 7.3e-07 28.4 2.0 0.00036 19.9 0.5 2.7 2 0 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF28199 - 0.11 12.4 0.2 0.49 10.4 0.2 2.0 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand adh_short PF00106.25 ORF26787 - 9.2e-33 113.3 0.7 1e-32 113.2 0.1 1.3 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF26787 - 3.8e-22 79.0 0.0 4.9e-22 78.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF26787 - 0.0025 17.8 0.0 0.0035 17.3 0.0 1.2 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 ORF26787 - 0.0045 16.7 0.0 0.0082 15.8 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.6 ORF26787 - 0.0074 16.2 0.1 0.014 15.3 0.1 1.4 1 0 0 1 1 1 1 NAD(P)H-binding Adenylsucc_synt PF00709.21 ORF26787 - 0.028 13.4 0.0 0.045 12.7 0.0 1.3 1 0 0 1 1 1 0 Adenylosuccinate synthetase 3HCDH_N PF02737.18 ORF26787 - 0.044 13.7 0.0 0.091 12.6 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Alpha-amylase_C PF02806.18 ORF25180 - 1.3e-20 73.7 0.2 2.1e-20 73.0 0.2 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain DUF4309 PF14172.6 ORF25180 - 0.011 15.7 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) BPD_transp_2 PF02653.16 ORF21436 - 3.7e-39 134.5 38.3 4.6e-39 134.2 38.3 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peptidase_M50B PF13398.6 ORF13364 - 3.4e-07 30.1 1.4 3.4e-07 30.1 1.4 2.3 2 0 0 2 2 2 1 Peptidase M50B-like Peptidase_M50 PF02163.22 ORF13364 - 0.0013 18.0 5.3 0.0082 15.4 0.7 2.5 3 0 0 3 3 3 2 Peptidase family M50 zf_C2H2_13 PF18508.1 ORF13364 - 0.037 13.6 0.9 0.065 12.8 0.1 1.8 2 0 0 2 2 2 0 Zinc finger domain DUF3267 PF11667.8 ORF13364 - 0.1 12.9 0.2 0.1 12.9 0.2 3.0 2 1 2 4 4 4 0 Putative zincin peptidase adh_short PF00106.25 ORF10952 - 5.8e-35 120.5 0.2 7.9e-35 120.1 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF10952 - 2.5e-22 79.6 0.0 3.2e-22 79.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF10952 - 0.00038 20.4 0.0 0.0005 20.0 0.0 1.2 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 ORF10952 - 0.0028 17.3 0.0 0.0051 16.5 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.6 ORF10952 - 0.0067 16.3 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding Adenylsucc_synt PF00709.21 ORF10952 - 0.01 14.8 0.1 0.015 14.3 0.1 1.2 1 0 0 1 1 1 0 Adenylosuccinate synthetase 3HCDH_N PF02737.18 ORF10952 - 0.038 13.9 0.0 0.068 13.1 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyoxalase_6 PF18029.1 ORF108438 - 2.3e-09 38.0 0.2 0.00011 22.9 0.0 2.4 2 0 0 2 2 2 2 Glyoxalase-like domain Glyoxalase PF00903.25 ORF108438 - 2.1e-08 34.4 0.0 0.00025 21.2 0.0 2.9 3 1 0 3 3 3 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF108438 - 0.0018 18.6 0.0 0.69 10.2 0.0 2.5 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CppA_N PF14506.6 ORF108438 - 0.21 11.7 0.0 2.8 8.0 0.0 2.2 2 0 0 2 2 2 0 CppA N-terminal Pkinase PF00069.25 ORF108177 - 2e-59 201.1 0.0 2.3e-59 200.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF108177 - 2.5e-39 135.1 0.0 3e-39 134.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF108177 - 0.00031 20.2 0.0 0.00065 19.1 0.0 1.5 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF108177 - 0.0063 16.5 0.0 1 9.2 0.0 2.7 2 1 1 3 3 3 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF108177 - 0.059 13.0 0.0 0.09 12.4 0.0 1.3 1 1 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF108177 - 0.21 10.9 0.0 0.32 10.3 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Macro PF01661.21 ORF108132 - 6.3e-31 106.9 0.1 6.3e-31 106.9 0.1 2.7 2 2 0 2 2 2 1 Macro domain PMEI PF04043.15 ORF108132 - 0.007 16.7 0.6 0.12 12.7 0.3 2.3 2 0 0 2 2 2 1 Plant invertase/pectin methylesterase inhibitor Sigma_reg_C PF13791.6 ORF108132 - 0.012 15.9 3.6 0.025 14.8 3.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator C-terminal DUF2312 PF10073.9 ORF108132 - 0.058 13.0 0.1 0.058 13.0 0.1 2.6 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) Pilt PF15453.6 ORF108132 - 0.12 11.7 1.1 0.17 11.3 1.1 1.1 1 0 0 1 1 1 0 Protein incorporated later into Tight Junctions SLATT_5 PF18160.1 ORF108132 - 0.66 9.3 6.3 1.3 8.3 6.3 1.4 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 TMPIT PF07851.13 ORF108132 - 1 8.5 7.4 1.5 8.0 7.4 1.3 1 0 0 1 1 1 0 TMPIT-like protein YabA PF06156.13 ORF108132 - 1 10.0 8.5 0.25 12.0 5.2 1.8 2 0 0 2 2 2 0 Initiation control protein YabA T3SSipB PF16535.5 ORF108132 - 1.3 9.5 7.2 2.1 8.8 7.2 1.4 1 1 0 1 1 1 0 Type III cell invasion protein SipB Fil_haemagg PF05594.14 ORF107121 - 0.069 13.7 50.8 1.8e+04 -16.5 50.8 3.6 1 1 0 1 1 1 0 Haemagluttinin repeat Trp_oprn_chp PF09534.10 ORF107121 - 5.2 6.8 37.8 5.2 6.8 8.5 2.6 1 1 2 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) SH3_3 PF08239.11 ORF103875 - 1e-08 35.3 0.2 6.1e-07 29.6 0.1 2.8 3 0 0 3 3 3 1 Bacterial SH3 domain SH3_4 PF06347.13 ORF103875 - 0.00031 20.5 1.2 0.032 14.1 0.4 3.3 3 1 0 3 3 3 1 Bacterial SH3 domain SH3_9 PF14604.6 ORF103875 - 0.0056 16.5 0.2 2.2 8.2 0.1 2.6 2 0 0 2 2 2 2 Variant SH3 domain SH3_1 PF00018.28 ORF103875 - 0.23 11.1 0.8 17 5.1 0.0 2.5 2 0 0 2 2 2 0 SH3 domain ER_lumen_recept PF00810.18 ORF103745 - 3.1e-30 106.0 1.0 3.1e-30 106.0 1.0 2.0 2 0 0 2 2 2 1 ER lumen protein retaining receptor UVR PF02151.19 ORF102995 - 0.0034 17.1 3.5 0.0034 17.1 3.5 2.4 2 0 0 2 2 2 1 UvrB/uvrC motif bZIP_2 PF07716.15 ORF102995 - 4.9 7.3 13.5 0.15 12.2 2.7 2.7 2 0 0 2 2 2 0 Basic region leucine zipper Apolipoprotein PF01442.18 ORF100637 - 0.0002 21.3 13.0 0.00028 20.8 9.1 2.5 2 1 0 2 2 2 1 Apolipoprotein A1/A4/E domain EzrA PF06160.12 ORF100637 - 0.00026 19.3 22.6 0.012 13.8 15.9 2.7 1 1 1 2 2 2 2 Septation ring formation regulator, EzrA FliD_C PF07195.12 ORF100637 - 0.0017 17.8 5.8 0.0017 17.8 5.8 2.3 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus GAS PF13851.6 ORF100637 - 0.0031 16.9 3.3 0.0031 16.9 3.3 3.0 1 1 0 2 2 2 1 Growth-arrest specific micro-tubule binding Med9 PF07544.13 ORF100637 - 0.0034 17.4 14.3 0.31 11.2 2.5 4.0 2 1 1 3 3 3 2 RNA polymerase II transcription mediator complex subunit 9 DUF1664 PF07889.12 ORF100637 - 0.0044 17.0 18.0 0.0058 16.7 7.6 3.4 2 1 2 4 4 3 1 Protein of unknown function (DUF1664) YtxH PF12732.7 ORF100637 - 0.0074 16.8 14.9 1.2 9.7 7.5 3.8 1 1 2 3 3 3 1 YtxH-like protein Baculo_p24 PF05073.12 ORF100637 - 0.009 15.8 5.7 0.009 15.8 5.7 2.3 1 1 1 2 2 2 1 Baculovirus P24 capsid protein Com_YlbF PF06133.11 ORF100637 - 0.0092 16.6 2.1 0.0092 16.6 2.1 3.9 2 1 0 2 2 1 1 Control of competence regulator ComK, YlbF/YmcA TMPIT PF07851.13 ORF100637 - 0.021 14.1 21.1 0.56 9.4 3.1 2.4 1 1 1 2 2 2 0 TMPIT-like protein Mod_r PF07200.13 ORF100637 - 0.023 14.8 23.0 0.8 9.8 3.4 3.3 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein DUF2703 PF10865.8 ORF100637 - 0.024 14.8 1.0 0.024 14.8 1.0 2.5 2 1 1 3 3 2 0 Domain of unknown function (DUF2703) DUF4349 PF14257.6 ORF100637 - 0.034 13.6 11.5 0.16 11.4 0.3 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4349) Flagellin_N PF00669.20 ORF100637 - 0.046 13.8 4.9 0.96 9.6 0.0 2.9 2 1 1 3 3 3 0 Bacterial flagellin N-terminal helical region CREPT PF16566.5 ORF100637 - 0.048 13.8 19.1 0.041 14.0 4.7 3.1 1 1 2 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour Snapin_Pallidin PF14712.6 ORF100637 - 0.052 14.0 0.3 0.052 14.0 0.3 4.1 2 1 1 3 3 3 0 Snapin/Pallidin ApoLp-III PF07464.11 ORF100637 - 0.081 13.0 21.5 0.39 10.8 3.0 3.5 1 1 2 3 3 3 0 Apolipophorin-III precursor (apoLp-III) HsbA PF12296.8 ORF100637 - 0.13 12.7 1.5 3.6 8.0 0.1 2.5 2 1 0 2 2 2 0 Hydrophobic surface binding protein A Fic_N PF13784.6 ORF100637 - 0.13 12.3 2.9 3 7.9 1.5 2.7 2 1 0 2 2 2 0 Fic/DOC family N-terminal NPV_P10 PF05531.12 ORF100637 - 0.14 12.6 11.8 9.9 6.7 1.5 4.5 1 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein YkyA PF10368.9 ORF100637 - 0.15 11.8 30.6 1 9.0 12.1 2.6 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein Laminin_II PF06009.12 ORF100637 - 0.15 12.1 0.4 0.15 12.1 0.4 3.4 1 1 0 2 2 2 0 Laminin Domain II DUF4407 PF14362.6 ORF100637 - 0.16 11.3 13.6 0.0081 15.6 6.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) TPR_MLP1_2 PF07926.12 ORF100637 - 0.17 11.9 26.2 0.68 10.0 0.6 3.6 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Exonuc_VII_L PF02601.15 ORF100637 - 0.18 11.3 15.9 2.3 7.7 15.9 2.1 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF3135 PF11333.8 ORF100637 - 0.22 11.8 7.6 0.082 13.2 1.1 3.2 3 1 1 4 4 2 0 Protein of unknown function (DUF3135) DUF3584 PF12128.8 ORF100637 - 0.23 8.9 21.9 0.7 7.3 21.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Spc7 PF08317.11 ORF100637 - 0.25 10.2 28.8 0.013 14.4 15.3 2.5 1 1 1 2 2 2 0 Spc7 kinetochore protein BST2 PF16716.5 ORF100637 - 0.28 11.8 19.6 2.2 8.9 3.3 4.5 3 1 1 4 4 4 0 Bone marrow stromal antigen 2 FAM184 PF15665.5 ORF100637 - 0.31 10.8 28.4 0.6 9.9 27.7 1.9 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B Elf4 PF07011.11 ORF100637 - 0.35 10.8 5.3 9.5 6.2 1.0 2.9 2 1 1 3 3 3 0 Early Flowering 4 domain Baculo_PEP_C PF04513.12 ORF100637 - 0.36 10.9 6.0 4.7 7.2 0.5 3.3 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus SHE3 PF17078.5 ORF100637 - 0.37 10.5 21.0 15 5.2 20.2 3.1 1 1 0 2 2 2 0 SWI5-dependent HO expression protein 3 AAA_13 PF13166.6 ORF100637 - 0.38 9.3 25.2 0.15 10.7 15.5 2.3 1 1 1 2 2 2 0 AAA domain Vps51 PF08700.11 ORF100637 - 0.4 10.8 13.9 3.8 7.6 2.7 4.3 2 2 0 3 3 3 0 Vps51/Vps67 DUF2203 PF09969.9 ORF100637 - 0.6 10.8 13.8 0.92 10.2 0.3 3.3 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) OmpH PF03938.14 ORF100637 - 0.67 10.3 30.4 0.16 12.3 4.9 3.4 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) Cob_adeno_trans PF01923.18 ORF100637 - 0.82 9.8 9.2 0.44 10.7 5.3 2.3 1 1 1 2 2 2 0 Cobalamin adenosyltransferase CENP-H PF05837.12 ORF100637 - 1.2 9.6 20.6 0.14 12.6 1.7 3.2 1 1 1 3 3 3 0 Centromere protein H (CENP-H) DUF148 PF02520.17 ORF100637 - 1.4 9.1 21.2 0.044 13.9 8.6 2.8 1 1 1 2 2 2 0 Domain of unknown function DUF148 SlyX PF04102.12 ORF100637 - 1.6 9.4 16.8 3.3 8.4 0.2 4.7 2 2 2 4 4 4 0 SlyX HMMR_N PF15905.5 ORF100637 - 1.7 8.1 31.7 0.96 8.9 21.3 2.6 1 1 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal WXG100 PF06013.12 ORF100637 - 1.8 8.8 11.7 5.2 7.4 0.2 3.6 2 2 0 3 3 3 0 Proteins of 100 residues with WXG Prominin PF05478.11 ORF100637 - 2.1 6.2 13.8 5 5.0 13.7 1.4 1 1 0 1 1 1 0 Prominin Fib_alpha PF08702.10 ORF100637 - 2.7 8.2 20.5 0.17 12.0 7.6 3.0 1 1 1 3 3 3 0 Fibrinogen alpha/beta chain family CorA PF01544.18 ORF100637 - 2.9 7.1 9.7 0.84 8.9 5.6 2.0 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein HalX PF08663.10 ORF100637 - 5 7.5 12.2 12 6.3 0.3 4.1 2 1 1 4 4 3 0 HalX domain DHC PF09626.10 ORF100637 - 5.8 7.8 6.4 3.2 8.6 1.4 2.3 2 1 0 2 2 2 0 Dihaem cytochrome c Myb_DNA-bind_3 PF12776.7 ORF100637 - 8 7.5 10.5 18 6.4 3.7 3.6 1 1 3 4 4 4 0 Myb/SANT-like DNA-binding domain Seryl_tRNA_N PF02403.22 ORF100637 - 8.7 6.6 25.4 0.78 10.0 9.9 4.0 1 1 2 4 4 4 0 Seryl-tRNA synthetase N-terminal domain UPF0242 PF06785.11 ORF100637 - 9.1 6.3 32.0 2 8.4 5.4 3.4 1 1 2 3 3 2 0 Uncharacterised protein family (UPF0242) N-terminus PCRF PF03462.18 ORF100637 - 9.2 6.1 22.3 9.8 6.0 3.7 2.5 1 1 2 3 3 3 0 PCRF domain DUF883 PF05957.13 ORF100637 - 9.4 6.9 10.5 10 6.8 3.8 3.7 3 1 1 4 4 3 0 Bacterial protein of unknown function (DUF883) DUF1515 PF07439.11 ORF100637 - 9.8 6.3 9.3 1.4 9.0 2.5 2.7 3 1 0 3 3 2 0 Protein of unknown function (DUF1515) zf-RING_2 PF13639.6 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_1 - 4.1e-09 36.6 6.6 1.3e-08 35.0 6.6 1.9 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_1 - 7.6e-06 25.6 1.7 2.3e-05 24.0 1.7 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_1 - 2.1e-05 24.4 3.4 5.6e-05 23.0 3.4 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_1 - 3.1e-05 24.2 5.3 9.3e-05 22.6 5.3 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_1 - 0.00021 21.2 3.9 0.0006 19.8 3.9 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_1 - 0.0012 18.6 6.5 0.0036 17.1 6.5 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_1 - 0.0051 16.6 6.1 0.014 15.2 6.1 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) U-box PF04564.15 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_1 - 0.011 15.9 0.2 0.034 14.3 0.1 1.9 2 1 1 3 3 3 0 U-box domain zf-C3HC4_4 PF15227.6 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_1 - 0.97 9.7 4.8 2.8 8.2 4.8 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_1 - 4.1e-09 36.6 6.6 1.3e-08 35.0 6.6 1.9 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_1 - 7.6e-06 25.6 1.7 2.3e-05 24.0 1.7 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_1 - 2.1e-05 24.4 3.4 5.6e-05 23.0 3.4 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_1 - 3.1e-05 24.2 5.3 9.3e-05 22.6 5.3 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_1 - 0.00022 21.2 3.9 0.0006 19.8 3.9 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_1 - 0.0012 18.6 6.5 0.0036 17.1 6.5 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_1 - 0.0051 16.6 6.1 0.014 15.2 6.1 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) U-box PF04564.15 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_1 - 0.011 15.9 0.2 0.034 14.3 0.1 1.9 2 1 1 3 3 3 0 U-box domain zf-C3HC4_4 PF15227.6 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_1 - 0.97 9.7 4.8 2.8 8.2 4.8 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Pkinase PF00069.25 NODE_25149_length_836_cov_3.621723_g19612_i0forward_frame_1 - 6.6e-23 81.4 0.0 1.5e-22 80.3 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_25149_length_836_cov_3.621723_g19612_i0forward_frame_1 - 1.8e-05 24.2 0.3 4.5e-05 22.9 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase TRAM_LAG1_CLN8 PF03798.16 NODE_25104_length_837_cov_82.233167_g19573_i0forward_frame_1 - 0.0073 16.1 16.9 0.024 14.4 16.9 1.9 1 1 0 1 1 1 1 TLC domain S1FA PF04689.13 NODE_25104_length_837_cov_82.233167_g19573_i0forward_frame_1 - 7.9 6.7 11.9 7.8 6.7 5.6 2.7 1 1 1 2 2 2 0 DNA binding protein S1FA ubiquitin PF00240.23 NODE_25099_length_837_cov_112.734414_g19570_i0reverse_frame_1 - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family YliH PF10799.8 NODE_25099_length_837_cov_112.734414_g19570_i0forward_frame_1 - 0.066 13.1 0.1 0.16 11.9 0.1 1.7 1 0 0 1 1 1 0 Biofilm formation protein (YliH/bssR) GNAT_C PF18164.1 NODE_25091_length_837_cov_162.865337_g16490_i1reverse_frame_1 - 0.044 13.5 1.2 0.069 12.9 0.7 1.6 2 0 0 2 2 2 0 GNAT-like C-terminal domain DUF3493 PF11998.8 NODE_25060_length_838_cov_20.278954_g17770_i1forward_frame_2 - 1.4 9.2 3.4 4.9 7.4 0.2 2.5 2 0 0 2 2 2 0 Low psii accumulation1 / Rep27 U-box PF04564.15 NODE_25057_length_838_cov_76.475716_g19533_i0forward_frame_3 - 1e-05 25.6 0.6 2.4e-05 24.4 0.1 1.9 2 0 0 2 2 2 1 U-box domain Z1 PF10593.9 NODE_25057_length_838_cov_76.475716_g19533_i0forward_frame_3 - 1.8 8.0 9.2 0.27 10.7 0.2 2.5 2 1 0 2 2 2 0 Z1 domain DUF411 PF04214.13 NODE_25056_length_838_cov_96.648817_g19532_i0reverse_frame_2 - 0.052 13.5 2.1 6.3 6.8 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function, DUF DUF4248 PF14053.6 NODE_25056_length_838_cov_96.648817_g19532_i0reverse_frame_2 - 0.55 10.3 6.2 12 6.0 0.8 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4248) PAP2_3 PF14378.6 NODE_25041_length_838_cov_299.112080_g19521_i0reverse_frame_3 - 0.17 11.5 1.8 0.29 10.8 0.5 1.8 2 0 0 2 2 2 0 PAP2 superfamily Lig_chan PF00060.26 NODE_25041_length_838_cov_299.112080_g19521_i0reverse_frame_2 - 1.5e-11 44.3 0.1 2.3e-11 43.8 0.1 1.3 1 0 0 1 1 1 1 Ligand-gated ion channel SBP_bac_3 PF00497.20 NODE_25041_length_838_cov_299.112080_g19521_i0reverse_frame_2 - 0.0014 18.1 0.0 0.0019 17.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 MARVEL PF01284.23 NODE_25030_length_838_cov_676.960149_g19512_i0reverse_frame_3 - 0.7 9.9 13.4 0.095 12.7 7.7 2.1 1 1 1 2 2 2 0 Membrane-associating domain Ras PF00071.22 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 2.4e-28 98.8 0.9 4.2e-28 98.0 0.9 1.4 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 2.1e-23 82.8 0.3 5.5e-23 81.5 0.3 1.7 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 1.8e-13 50.3 1.2 2.9e-13 49.7 1.2 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 9.7e-07 28.4 0.3 1.6e-06 27.6 0.3 1.4 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 1.5e-06 28.3 0.1 2.9e-06 27.3 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 5.6e-05 22.7 0.2 0.00012 21.5 0.2 1.5 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 0.00014 21.4 2.6 0.011 15.3 0.9 2.3 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain TniB PF05621.11 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 0.0011 18.4 0.0 0.0024 17.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial TniB protein FeoB_N PF02421.18 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 0.0015 18.0 0.9 0.0049 16.4 0.9 1.8 1 1 0 1 1 1 1 Ferrous iron transport protein B ATP_bind_1 PF03029.17 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 0.023 14.5 0.0 0.04 13.7 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 0.031 14.0 0.5 0.094 12.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 NODE_24959_length_840_cov_210.916770_g19454_i0forward_frame_3 - 0.085 12.9 2.4 0.11 12.5 0.0 2.2 2 1 0 2 2 2 0 Dynamin family VIT PF08487.10 ORF96864 - 7.8e-20 71.1 0.5 1.4e-19 70.3 0.5 1.4 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VIT_2 PF13757.6 ORF96864 - 0.021 14.7 0.0 0.042 13.7 0.0 1.5 1 0 0 1 1 1 0 Vault protein inter-alpha-trypsin domain DUF5123 PF17161.4 ORF96864 - 4.8 8.3 8.8 0.3 12.2 0.7 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF5123) RFC1 PF08519.12 ORF95751 - 0.026 14.7 0.5 0.053 13.7 0.5 1.4 1 0 0 1 1 1 0 Replication factor RFC1 C terminal domain DUF2887 PF11103.8 ORF95751 - 0.088 12.8 1.8 0.14 12.2 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2887) Macro PF01661.21 ORF93275 - 4.1e-17 62.3 0.3 1.5e-16 60.5 0.1 2.1 2 1 0 2 2 2 1 Macro domain DUF1043 PF06295.12 ORF93275 - 0.0072 16.3 9.6 0.0072 16.3 9.6 2.3 1 1 1 2 2 2 1 Protein of unknown function (DUF1043) ATG16 PF08614.11 ORF93275 - 0.56 10.4 19.6 0.081 13.1 11.3 2.3 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF948 PF06103.11 ORF93275 - 3 8.2 5.4 16 5.8 5.0 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) CdvA PF18822.1 ORF93275 - 3.8 7.4 25.9 0.63 9.9 3.8 3.2 2 1 1 3 3 3 0 CdvA-like coiled-coil domain DUF3450 PF11932.8 ORF93275 - 5.2 6.3 23.9 0.05 12.9 15.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) Syntaxin-6_N PF09177.11 ORF93275 - 7.8 7.1 12.8 2.2 8.9 8.2 2.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Cation_ATPase_C PF00689.21 ORF91954 - 2.5e-15 56.7 12.9 3.3e-15 56.3 12.9 1.2 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF91954 - 0.0052 17.1 0.1 0.0069 16.7 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase COX7C PF02935.16 ORF91954 - 0.0057 16.9 0.2 0.0057 16.9 0.2 2.1 2 0 0 2 2 2 1 Cytochrome c oxidase subunit VIIc Hydrolase_3 PF08282.12 ORF91954 - 0.0096 15.7 0.1 0.013 15.2 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase MORN PF02493.20 ORF88613 - 0.00075 19.2 0.1 0.00075 19.2 0.1 2.3 3 0 0 3 3 3 1 MORN repeat DUF4816 PF16086.5 ORF88613 - 0.082 12.8 1.0 0.082 12.8 1.0 3.5 5 0 0 5 5 5 0 Domain of unknown function (DUF4816) DUF1925 PF09094.11 ORF86842 - 0.0068 16.7 0.0 0.99 9.8 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF1925) Ank_2 PF12796.7 ORF84545 - 4.1e-14 52.9 0.2 1.6e-11 44.6 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF84545 - 2.1e-10 40.9 1.6 5.9e-09 36.3 0.1 3.4 4 0 0 4 4 4 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF84545 - 2.9e-08 33.8 4.4 0.14 12.7 0.1 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF84545 - 1.3e-06 28.2 4.8 0.049 14.2 0.0 4.5 5 0 0 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF84545 - 0.00038 20.7 2.4 0.25 11.7 0.0 3.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Tho1_MOS11_C PF18592.1 ORF80215 - 0.0035 17.1 2.2 0.0059 16.4 0.3 2.1 2 0 0 2 2 2 1 Tho1/MOS11 C-terminal domain DUF5404 PF17397.2 ORF80215 - 0.13 12.4 1.6 0.68 10.1 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5404) BTB PF00651.31 ORF78218 - 4.8e-13 49.3 0.0 8.6e-13 48.5 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain Macro PF01661.21 ORF76138 - 4.1e-17 62.3 0.3 1.5e-16 60.5 0.1 2.1 2 1 0 2 2 2 1 Macro domain DUF1043 PF06295.12 ORF76138 - 0.0072 16.3 9.6 0.0072 16.3 9.6 2.3 1 1 1 2 2 2 1 Protein of unknown function (DUF1043) ATG16 PF08614.11 ORF76138 - 0.56 10.4 19.6 0.081 13.1 11.3 2.3 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF948 PF06103.11 ORF76138 - 3 8.2 5.4 16 5.8 5.0 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) CdvA PF18822.1 ORF76138 - 3.8 7.4 25.9 0.63 9.9 3.8 3.2 2 1 1 3 3 3 0 CdvA-like coiled-coil domain DUF3450 PF11932.8 ORF76138 - 5.2 6.3 23.9 0.05 12.9 15.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) Syntaxin-6_N PF09177.11 ORF76138 - 7.8 7.1 12.8 2.2 8.9 8.2 2.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Mfa2 PF08842.10 ORF74790 - 0.0057 16.3 0.6 0.0077 15.9 0.6 1.2 1 0 0 1 1 1 1 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 WD40 PF00400.32 ORF68568 - 4.2e-05 24.2 0.3 0.0086 16.9 0.1 3.4 4 0 0 4 4 4 1 WD domain, G-beta repeat CDC45 PF02724.14 ORF68568 - 0.011 14.1 5.2 0.013 13.9 5.2 1.1 1 0 0 1 1 1 0 CDC45-like protein Herpes_DNAp_acc PF04929.12 ORF68568 - 0.24 10.3 2.9 0.32 9.9 2.9 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor RNA_polI_A34 PF08208.11 ORF68568 - 0.49 10.5 19.4 0.69 10.0 19.4 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Nop14 PF04147.12 ORF68568 - 0.53 8.4 12.3 0.61 8.2 12.3 1.0 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 ORF68568 - 3.6 6.9 18.6 4.5 6.6 18.6 1.1 1 0 0 1 1 1 0 SDA1 DUF3381 PF11861.8 ORF68568 - 4.9 6.9 15.8 7.2 6.4 15.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) Paf1 PF03985.13 ORF68568 - 7.9 5.4 17.0 10 5.0 17.0 1.1 1 0 0 1 1 1 0 Paf1 ArfGap PF01412.18 ORF64896 - 6.3e-23 81.1 0.1 1.1e-22 80.3 0.1 1.3 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf RNA_pol_Rpb2_6 PF00562.28 ORF64486 - 7.7e-69 232.6 0.3 2.8e-68 230.8 0.3 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 ORF64486 - 1.2e-24 86.5 0.0 2.4e-24 85.5 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 DHC_N2 PF08393.13 ORF64486 - 0.13 11.3 0.0 0.19 10.8 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 2 SET PF00856.28 ORF64408 - 9.4e-07 29.4 0.0 3e-06 27.7 0.0 1.8 2 0 0 2 2 2 1 SET domain DUF695 PF05117.12 ORF64408 - 0.0072 16.5 0.0 0.014 15.6 0.0 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF695) OrfB_Zn_ribbon PF07282.11 ORF64408 - 0.63 10.0 6.7 0.61 10.0 0.9 2.3 1 1 1 2 2 2 0 Putative transposase DNA-binding domain DUF2616 PF11077.8 ORF64220 - 0.014 15.1 2.2 0.024 14.3 2.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2616) DUF4880 PF16220.5 ORF6414 - 0.077 12.9 0.6 0.21 11.5 0.6 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4880) OmpH PF03938.14 ORF6414 - 0.18 12.2 2.0 1.2 9.5 0.5 2.1 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) MORN PF02493.20 ORF55821 - 0.00075 19.2 0.1 0.00075 19.2 0.1 2.2 3 0 0 3 3 3 1 MORN repeat DUF4816 PF16086.5 ORF55821 - 0.082 12.8 1.0 0.082 12.8 1.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4816) SHMT PF00464.19 ORF539 - 1.7e-59 201.4 0.0 2.1e-59 201.2 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 ORF539 - 0.00066 19.0 0.0 0.0008 18.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 ORF539 - 0.00067 18.9 0.0 0.0008 18.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Pyr_redox_2 PF07992.14 ORF52057 - 6.3e-05 22.4 0.0 0.00011 21.5 0.0 1.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF52057 - 0.028 13.5 0.0 0.041 13.0 0.0 1.2 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) MORN PF02493.20 ORF46556 - 0.00033 20.4 1.0 0.00075 19.2 0.1 2.2 2 0 0 2 2 2 1 MORN repeat IBD PF10416.9 ORF46556 - 0.0013 18.7 1.0 0.0036 17.3 1.0 1.7 1 0 0 1 1 1 1 Transcription-initiator DNA-binding domain IBD DUF1803 PF08820.10 ORF46556 - 1.7 8.7 8.1 14 5.8 8.0 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF1803) ACP PF06857.11 ORF46556 - 4.6 7.5 6.3 0.91 9.8 0.4 2.7 3 0 0 3 3 3 0 Malonate decarboxylase delta subunit (MdcD) Cullin PF00888.22 ORF46336 - 2.8e-18 65.9 0.0 6.4e-18 64.7 0.0 1.5 2 0 0 2 2 2 1 Cullin family ANAPC2 PF08672.11 ORF46336 - 7.1e-16 58.5 0.5 1.5e-15 57.5 0.5 1.6 1 0 0 1 1 1 1 Anaphase promoting complex (APC) subunit 2 FeoC PF09012.10 ORF46336 - 0.00015 21.8 0.0 0.037 14.1 0.0 3.2 3 0 0 3 3 3 1 FeoC like transcriptional regulator HTH_IclR PF09339.10 ORF46336 - 0.0074 16.1 0.4 0.69 9.8 0.0 3.1 3 0 0 3 3 3 1 IclR helix-turn-helix domain DUF928 PF06051.12 ORF46336 - 0.035 14.0 0.0 0.052 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF928) Macro PF01661.21 ORF45975 - 4.1e-17 62.3 0.3 1.5e-16 60.5 0.1 2.1 2 1 0 2 2 2 1 Macro domain DUF1043 PF06295.12 ORF45975 - 0.0072 16.3 9.6 0.0072 16.3 9.6 2.3 1 1 1 2 2 2 1 Protein of unknown function (DUF1043) ATG16 PF08614.11 ORF45975 - 0.56 10.4 19.6 0.081 13.1 11.3 2.3 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF948 PF06103.11 ORF45975 - 3 8.2 5.4 16 5.8 5.0 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) CdvA PF18822.1 ORF45975 - 3.8 7.4 25.9 0.63 9.9 3.8 3.2 2 1 1 3 3 3 0 CdvA-like coiled-coil domain DUF3450 PF11932.8 ORF45975 - 5.2 6.3 23.9 0.05 12.9 15.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) Syntaxin-6_N PF09177.11 ORF45975 - 7.8 7.1 12.8 2.2 8.9 8.2 2.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Methyltransf_3 PF01596.17 ORF45011 - 2.9e-14 52.8 0.0 4.2e-14 52.2 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF45011 - 8.9e-10 39.5 0.0 1.4e-09 38.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 ORF45011 - 0.12 11.9 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase HSP9_HSP12 PF04119.12 ORF39543 - 0.12 12.8 0.1 0.32 11.4 0.1 1.7 1 0 0 1 1 1 0 Heat shock protein 9/12 Peptidase_C12 PF01088.21 ORF35975 - 2.1e-43 148.5 0.0 2.7e-43 148.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 UBA PF00627.31 ORF35975 - 2e-12 46.7 0.6 4.5e-12 45.6 0.6 1.6 1 0 0 1 1 1 1 UBA/TS-N domain Ubiq-assoc PF09145.10 ORF35975 - 0.03 14.3 0.7 0.22 11.5 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-associated UBA_4 PF14555.6 ORF35975 - 0.04 13.7 0.4 0.11 12.4 0.4 1.7 1 0 0 1 1 1 0 UBA-like domain EF-hand_6 PF13405.6 ORF35350 - 0.0055 16.5 0.0 0.059 13.3 0.1 2.4 2 0 0 2 2 2 1 EF-hand domain Ion_trans PF00520.31 ORF35350 - 0.015 14.5 0.6 0.023 13.9 0.6 1.3 1 0 0 1 1 1 0 Ion transport protein EF-hand_7 PF13499.6 ORF35350 - 0.016 15.7 0.2 0.052 14.0 0.1 1.9 1 1 0 1 1 1 0 EF-hand domain pair Gon7 PF08738.10 ORF35350 - 0.03 14.4 0.1 0.18 11.9 0.0 2.1 2 1 0 2 2 2 0 Gon7 family EF-hand_1 PF00036.32 ORF35350 - 0.058 13.0 0.0 0.28 10.8 0.1 2.2 2 0 0 2 2 2 0 EF hand EF-hand_5 PF13202.6 ORF35350 - 0.1 12.1 0.1 0.26 10.9 0.1 1.7 1 0 0 1 1 1 0 EF hand Cwf_Cwc_15 PF04889.12 ORF31008 - 0.023 14.5 6.4 0.04 13.7 6.4 1.4 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein FAP PF07174.11 ORF31008 - 0.063 12.7 9.2 0.085 12.3 9.2 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) FAP PF07174.11 ORF30921 - 0.063 12.7 9.2 0.085 12.3 9.2 1.2 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Cwf_Cwc_15 PF04889.12 ORF30921 - 0.2 11.4 7.1 0.35 10.6 7.1 1.4 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein ThiF PF00899.21 ORF29359 - 5.2e-19 68.6 0.1 7.1e-19 68.1 0.1 1.2 1 0 0 1 1 1 1 ThiF family Rhodanese PF00581.20 ORF29359 - 1.4e-09 38.4 0.0 2.3e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain NAD_binding_3 PF03447.16 ORF29359 - 0.12 13.0 0.1 0.8 10.4 0.0 2.2 2 0 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain Ni_hydr_CYTB PF01292.20 ORF25953 - 0.022 14.4 0.8 0.033 13.8 0.7 1.4 1 1 0 1 1 1 0 Prokaryotic cytochrome b561 DUF2370 PF10176.9 ORF25953 - 0.079 12.6 0.4 0.16 11.6 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) L_lactis_ph-MCP PF06673.11 ORF25953 - 0.1 11.6 0.0 0.15 11.1 0.0 1.2 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein DUF996 PF06195.13 ORF25953 - 0.4 11.0 8.9 0.065 13.5 2.2 2.1 1 1 2 3 3 3 0 Protein of unknown function (DUF996) RCC1_2 PF13540.6 ORF25186 - 1.1e-12 47.3 19.3 0.093 12.6 0.2 7.1 7 0 0 7 7 7 6 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF25186 - 0.0092 16.1 3.3 38 4.3 0.1 4.7 3 1 0 4 4 4 1 Uncharacterised ACR, YagE family COG1723 AbiJ_NTD5 PF18865.1 ORF25186 - 0.013 15.2 0.1 11 5.9 0.0 3.1 4 0 0 4 4 4 0 AbiJ N-terminal domain 5 Toprim PF01751.22 ORF25186 - 0.27 11.5 0.7 1.5e+02 2.7 0.0 3.6 2 2 2 4 4 4 0 Toprim domain MORN PF02493.20 ORF2295 - 0.00075 19.2 0.1 0.00075 19.2 0.1 2.3 3 0 0 3 3 3 1 MORN repeat IBD PF10416.9 ORF2295 - 0.0012 18.9 1.0 0.0036 17.3 1.0 1.8 1 0 0 1 1 1 1 Transcription-initiator DNA-binding domain IBD DUF4816 PF16086.5 ORF2295 - 0.082 12.8 1.0 0.082 12.8 1.0 3.8 5 0 0 5 5 5 0 Domain of unknown function (DUF4816) ACP PF06857.11 ORF2295 - 0.36 11.1 2.4 0.91 9.8 0.4 2.5 2 0 0 2 2 2 0 Malonate decarboxylase delta subunit (MdcD) DUF1803 PF08820.10 ORF2295 - 1.7 8.8 8.1 14 5.8 8.0 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF1803) Pkinase PF00069.25 ORF22006 - 4.6e-54 183.5 0.0 5.9e-54 183.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22006 - 1.5e-34 119.5 0.0 2e-34 119.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF22006 - 0.0033 16.8 0.0 0.0057 16.0 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Choline_kinase PF01633.20 ORF22006 - 0.0041 16.7 0.0 0.0069 16.0 0.0 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase Kdo PF06293.14 ORF22006 - 0.0066 15.8 0.2 0.015 14.6 0.0 1.6 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF22006 - 0.078 12.6 0.0 0.17 11.4 0.0 1.5 1 0 0 1 1 1 0 RIO1 family ArfGap PF01412.18 ORF19142 - 6.3e-33 113.3 0.6 6.3e-33 113.3 0.6 1.6 2 0 0 2 2 2 1 Putative GTPase activating protein for Arf Zn_Tnp_IS1595 PF12760.7 ORF19142 - 0.12 12.4 0.4 0.19 11.8 0.4 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-C3HC4_3 PF13920.6 ORF19142 - 0.45 10.4 2.8 0.7 9.8 2.8 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Acyl_transf_3 PF01757.22 ORF14281 - 4.6e-08 32.5 16.4 6e-08 32.1 16.4 1.1 1 0 0 1 1 1 1 Acyltransferase family TMEM208_SND2 PF05620.11 ORF14281 - 1.5 8.5 8.2 0.72 9.6 5.0 2.2 2 1 0 2 2 2 0 SRP-independent targeting protein 2/TMEM208 MORN PF02493.20 ORF14027 - 0.00033 20.4 1.0 0.00075 19.2 0.1 2.2 2 0 0 2 2 2 1 MORN repeat IBD PF10416.9 ORF14027 - 0.0013 18.7 1.0 0.0036 17.3 1.0 1.7 1 0 0 1 1 1 1 Transcription-initiator DNA-binding domain IBD DUF1803 PF08820.10 ORF14027 - 1.7 8.7 8.1 14 5.8 8.0 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF1803) ACP PF06857.11 ORF14027 - 4.6 7.5 6.3 0.91 9.8 0.4 2.7 3 0 0 3 3 3 0 Malonate decarboxylase delta subunit (MdcD) Pkinase PF00069.25 ORF13980 - 3.3e-43 148.0 0.0 3.8e-43 147.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13980 - 4.7e-22 78.5 0.0 5.8e-22 78.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF13980 - 2.4e-07 30.4 0.0 3.3e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like FecR PF04773.13 ORF12056 - 2.1e-16 60.3 0.6 3e-16 59.8 0.6 1.3 1 0 0 1 1 1 1 FecR protein DUF4880 PF16220.5 ORF12056 - 4.6e-09 36.0 11.5 4.6e-09 36.0 11.5 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4880) DUF2570 PF10828.8 ORF12056 - 0.32 10.8 0.0 0.32 10.8 0.0 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2570) p450 PF00067.22 ORF106349 - 8.1e-19 67.7 0.0 9.2e-19 67.5 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DBD_HTH PF18430.1 ORF101718 - 0.077 12.8 0.3 0.077 12.8 0.3 2.5 3 0 0 3 3 3 0 Putative DNA-binding domain STAT_alpha PF01017.20 ORF101718 - 2.4 8.0 11.3 0.36 10.7 6.2 2.1 2 0 0 2 2 2 0 STAT protein, all-alpha domain Pkinase PF00069.25 ORF100945 - 4.6e-54 183.5 0.0 5.9e-54 183.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100945 - 1.5e-34 119.5 0.0 2e-34 119.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF100945 - 0.0033 16.8 0.0 0.0057 16.0 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Choline_kinase PF01633.20 ORF100945 - 0.0041 16.7 0.0 0.0069 16.0 0.0 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase Kdo PF06293.14 ORF100945 - 0.0066 15.8 0.2 0.015 14.6 0.0 1.6 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF100945 - 0.078 12.6 0.0 0.17 11.4 0.0 1.5 1 0 0 1 1 1 0 RIO1 family ESP PF16590.5 NODE_25192_length_834_cov_3304.541927_g19647_i0reverse_frame_1 - 0.062 13.6 0.1 0.097 12.9 0.1 1.3 1 0 0 1 1 1 0 Exocrine gland-secreting peptide DUF5031 PF16434.5 NODE_25192_length_834_cov_3304.541927_g19647_i0forward_frame_1 - 0.065 12.4 0.6 0.081 12.1 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5031) DUF2935 PF11155.8 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_2 - 2.8 8.3 7.2 1.2 9.5 2.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) Fib_alpha PF08702.10 NODE_25163_length_835_cov_644.843750_g19622_i1reverse_frame_2 - 7.5 6.7 13.7 0.22 11.7 5.3 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family zf_C2H2_6 PF18450.1 NODE_25163_length_835_cov_644.843750_g19622_i1forward_frame_2 - 0.0013 18.4 2.1 0.0032 17.2 2.1 1.7 1 0 0 1 1 1 1 Zinc Finger domain DUF2935 PF11155.8 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_2 - 2.9 8.3 7.2 1.2 9.5 2.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) Fib_alpha PF08702.10 NODE_25162_length_835_cov_647.242500_g19622_i0reverse_frame_2 - 7.6 6.7 13.7 0.22 11.7 5.3 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family zf_C2H2_6 PF18450.1 NODE_25162_length_835_cov_647.242500_g19622_i0forward_frame_2 - 0.0013 18.4 2.1 0.0032 17.2 2.1 1.7 1 0 0 1 1 1 1 Zinc Finger domain CENP-B_dimeris PF09026.10 NODE_25116_length_836_cov_13504.411985_g9198_i5reverse_frame_2 - 0.00015 22.1 3.5 0.00026 21.3 3.5 1.3 1 0 0 1 1 1 1 Centromere protein B dimerisation domain RXT2_N PF08595.11 NODE_25116_length_836_cov_13504.411985_g9198_i5reverse_frame_2 - 0.014 15.4 0.4 0.018 15.1 0.4 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal FAM176 PF14851.6 NODE_25116_length_836_cov_13504.411985_g9198_i5reverse_frame_2 - 0.57 9.8 2.7 0.87 9.2 2.7 1.3 1 0 0 1 1 1 0 FAM176 family AIDA PF16168.5 NODE_25115_length_837_cov_2.953865_g19584_i0reverse_frame_2 - 7.9e-37 125.1 22.4 2e-24 85.4 4.1 4.5 2 1 4 6 6 6 6 Adhesin of bacterial autotransporter system, probable stalk DUF4375 PF14300.6 NODE_25115_length_837_cov_2.953865_g19584_i0reverse_frame_2 - 5 7.4 7.1 1.1 9.5 0.2 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4375) PTS_IIB PF02302.17 NODE_25114_length_837_cov_3.331671_g19583_i0forward_frame_2 - 2.7e-19 69.6 0.5 4.5e-19 68.9 0.5 1.4 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit Radical_SAM PF04055.21 NODE_25110_length_837_cov_4.902743_g19579_i0reverse_frame_2 - 1.7e-15 57.8 0.0 2.4e-15 57.3 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Radical_SAM_C PF16199.5 NODE_25110_length_837_cov_4.902743_g19579_i0reverse_frame_2 - 2.7e-07 30.5 0.0 6.9e-07 29.2 0.0 1.8 1 0 0 1 1 1 1 Radical_SAM C-terminal domain UCH PF00443.29 NODE_25091_length_837_cov_162.865337_g16490_i1reverse_frame_3 - 5.6e-25 88.3 4.2 7.1e-25 88.0 4.2 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_25091_length_837_cov_162.865337_g16490_i1reverse_frame_3 - 4.2e-09 36.4 0.5 4.4e-09 36.4 0.5 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF4241 PF14025.6 NODE_25091_length_837_cov_162.865337_g16490_i1reverse_frame_3 - 1 9.6 3.7 0.69 10.2 1.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4241) Abhydrolase_9_N PF15420.6 NODE_25085_length_837_cov_260.895262_g19557_i0reverse_frame_2 - 0.01 15.8 0.3 0.02 14.9 0.3 1.4 1 0 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus Rtf2 PF04641.12 NODE_25085_length_837_cov_260.895262_g19557_i0reverse_frame_2 - 0.14 11.5 0.1 0.19 11.1 0.1 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks59.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks59.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks59.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks59.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TAFH PF07531.14 ORF57812 - 0.028 14.5 0.1 0.14 12.3 0.1 2.2 1 0 0 1 1 1 0 NHR1 homology to TAF Glyco_hydro_46 PF01374.18 ORF57812 - 0.37 10.4 5.4 12 5.4 0.0 3.5 2 1 1 3 3 3 0 Glycosyl hydrolase family 46 CPG4 PF15481.6 ORF57812 - 8.3 7.1 11.9 0.65 10.7 0.3 3.9 3 1 0 3 3 3 0 Chondroitin proteoglycan 4 TAFH PF07531.14 ORF53317 - 0.028 14.5 0.1 0.14 12.3 0.1 2.2 1 0 0 1 1 1 0 NHR1 homology to TAF Glyco_hydro_46 PF01374.18 ORF53317 - 0.37 10.4 5.4 12 5.4 0.0 3.5 2 1 1 3 3 3 0 Glycosyl hydrolase family 46 CPG4 PF15481.6 ORF53317 - 8.3 7.1 11.9 0.65 10.7 0.3 3.9 3 1 0 3 3 3 0 Chondroitin proteoglycan 4 Methyltransf_3 PF01596.17 ORF88402 - 1e-10 41.2 0.0 2.3e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF88402 - 4.4e-08 34.1 0.5 1.1e-07 32.9 0.5 1.7 1 0 0 1 1 1 1 Methyltransferase domain TPR_14 PF13428.6 ORF88402 - 0.077 13.9 0.2 8.6 7.5 0.2 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat CmcI PF04989.12 ORF88402 - 0.098 12.3 0.1 0.18 11.5 0.1 1.3 1 0 0 1 1 1 0 Cephalosporin hydroxylase PPR PF01535.20 ORF88402 - 0.16 12.3 0.1 7.3 7.1 0.2 3.3 2 0 0 2 2 2 0 PPR repeat Piwi PF02171.17 ORF9443 - 2.4e-48 165.0 0.0 3.6e-48 164.3 0.0 1.3 1 0 0 1 1 1 1 Piwi domain PAZ PF02170.22 ORF9443 - 7.2e-17 61.5 0.9 1.3e-16 60.7 0.9 1.4 1 0 0 1 1 1 1 PAZ domain PEPcase PF00311.17 ORF85760 - 8.3e-282 937.0 0.0 9.5e-282 936.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase PEPcase_2 PF14010.6 ORF85760 - 8.5e-05 21.2 0.0 0.00012 20.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase SR-25 PF10500.9 ORF69739 - 0.0036 17.0 6.4 0.007 16.0 6.4 1.4 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein CDK2AP PF09806.9 ORF69739 - 0.58 10.2 9.2 1.1 9.3 9.2 1.4 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein Piwi PF02171.17 ORF34612 - 1.1e-58 198.9 0.1 1.6e-58 198.3 0.1 1.3 1 0 0 1 1 1 1 Piwi domain PAZ PF02170.22 ORF34612 - 5e-21 74.9 1.1 5e-21 74.9 1.1 2.2 1 1 1 2 2 2 1 PAZ domain DUF2067 PF09840.9 ORF34612 - 0.051 13.1 0.0 0.26 10.8 0.0 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2067) ArgoMid PF16487.5 ORF34612 - 0.25 11.6 1.6 0.63 10.3 0.0 2.6 3 0 0 3 3 3 0 Mid domain of argonaute HEAT_EZ PF13513.6 ORF3338 - 1.5e-11 44.5 15.5 0.045 14.3 0.1 7.8 7 0 0 7 7 7 3 HEAT-like repeat HEAT PF02985.22 ORF3338 - 1e-10 40.9 15.8 0.059 13.6 0.0 8.8 9 0 0 9 9 9 4 HEAT repeat HEAT_2 PF13646.6 ORF3338 - 9.1e-05 22.8 13.9 0.0061 16.9 0.2 5.8 4 2 2 6 6 6 2 HEAT repeats HEAT_PBS PF03130.16 ORF3338 - 0.0086 16.7 3.1 0.81 10.5 0.0 4.3 4 0 0 4 4 4 1 PBS lyase HEAT-like repeat Adaptin_N PF01602.20 ORF3338 - 0.028 13.0 0.3 0.35 9.4 0.0 2.7 3 1 0 3 3 3 0 Adaptin N terminal region Vac14_Fab1_bd PF12755.7 ORF3338 - 0.032 14.8 0.2 3.4 8.3 0.0 3.2 3 1 0 4 4 4 0 Vacuolar 14 Fab1-binding region GRA6 PF05084.13 ORF3338 - 0.069 13.1 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Granule antigen protein (GRA6) Arm PF00514.23 ORF3338 - 1.7 8.8 6.6 42 4.4 0.1 5.0 5 0 0 5 5 5 0 Armadillo/beta-catenin-like repeat Ank_2 PF12796.7 ORF95812 - 0.0033 18.0 0.1 0.1 13.2 0.0 2.1 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF95812 - 0.21 12.1 1.9 0.65 10.5 0.0 2.9 3 0 0 3 3 3 0 Ankyrin repeat Ank_2 PF12796.7 ORF13016 - 0.0033 18.0 0.1 0.1 13.2 0.0 2.1 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF13016 - 0.21 12.1 1.9 0.65 10.5 0.0 2.9 3 0 0 3 3 3 0 Ankyrin repeat E1-E2_ATPase PF00122.20 ORF100367 - 1.9e-48 164.4 0.7 2e-47 161.1 0.0 2.8 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 ORF100367 - 1.9e-35 123.1 8.1 3.8e-35 122.1 8.1 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 ORF100367 - 2.7e-12 46.9 0.3 5.8e-12 45.9 0.3 1.5 1 0 0 1 1 1 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 ORF100367 - 3.7e-07 30.1 1.6 1.2e-05 25.2 1.0 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase FeS_assembly_P PF01883.19 ORF100367 - 1.7 8.9 6.0 8.8 6.6 0.0 3.4 3 0 0 3 3 3 0 Iron-sulfur cluster assembly protein DEAD PF00270.29 ORF17500 - 2.2e-45 154.5 0.0 2.9e-44 150.9 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF17500 - 2.8e-25 88.8 0.1 1.8e-23 83.0 0.0 2.6 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF17500 - 0.00077 19.5 0.0 0.081 12.9 0.0 2.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 ORF17500 - 0.00094 18.5 0.1 0.0016 17.7 0.1 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase SecA_DEAD PF07517.14 ORF17500 - 0.053 12.8 0.0 0.14 11.4 0.0 1.7 1 0 0 1 1 1 0 SecA DEAD-like domain Nudc_N PF14050.6 ORF17500 - 0.09 12.8 0.1 0.28 11.2 0.0 1.9 2 0 0 2 2 2 0 N-terminal conserved domain of Nudc. RSRP PF17069.5 ORF17500 - 0.28 10.7 25.8 2.3 7.7 24.5 2.1 2 0 0 2 2 2 0 Arginine/Serine-Rich protein 1 DUF1509 PF07420.11 ORF17500 - 0.72 8.7 9.4 1.4 7.8 9.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Corona_nucleoca PF00937.18 ORF17500 - 2.1 7.3 11.2 3.9 6.4 11.2 1.3 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein CENP-H PF05837.12 ORF94233 - 0.011 16.1 1.6 0.011 16.1 1.6 2.9 3 0 0 3 3 3 0 Centromere protein H (CENP-H) CEP209_CC5 PF16574.5 ORF94233 - 0.13 12.4 13.2 1.4 9.1 2.9 3.3 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 ADIP PF11559.8 ORF94233 - 0.41 10.7 16.1 0.76 9.8 5.9 2.8 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 ORF94233 - 1.7 7.9 15.7 0.39 10.0 4.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Ntox28 PF15605.6 ORF94233 - 8.8 6.6 8.0 1.8 8.8 0.9 3.5 5 0 0 5 5 5 0 Bacterial toxin 28 CENP-H PF05837.12 ORF16794 - 0.011 16.1 1.6 0.011 16.1 1.6 2.9 3 0 0 3 3 3 0 Centromere protein H (CENP-H) CEP209_CC5 PF16574.5 ORF16794 - 0.13 12.5 13.2 1.4 9.1 2.9 3.3 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 ADIP PF11559.8 ORF16794 - 0.41 10.7 16.1 0.76 9.8 5.9 2.8 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 ORF16794 - 1.7 7.9 15.7 0.39 10.0 4.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Ntox28 PF15605.6 ORF16794 - 8.8 6.6 8.0 1.8 8.8 0.9 3.5 5 0 0 5 5 5 0 Bacterial toxin 28 Glyco_hydro_3 PF00933.21 ORF10789 - 9.4e-74 248.6 0.0 1.4e-73 248.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Glyco_hydro_3_C PF01915.22 ORF10789 - 8e-51 172.9 0.0 1.1e-50 172.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 ORF10789 - 4.6e-20 71.5 0.0 9.6e-20 70.5 0.0 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain tRNA-synt_1 PF00133.22 ORF68742 - 1.6e-113 380.1 0.0 2.4e-113 379.5 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF68742 - 2e-34 118.7 0.2 3.5e-34 118.0 0.2 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA Val_tRNA-synt_C PF10458.9 ORF68742 - 4.6e-07 30.0 4.7 1.1e-06 28.8 4.7 1.7 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1_2 PF13603.6 ORF68742 - 3.4e-06 26.7 0.0 9.5e-06 25.2 0.0 1.7 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1g PF09334.11 ORF68742 - 1.3e-05 24.2 0.1 0.1 11.3 0.1 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF68742 - 0.003 17.0 0.4 0.01 15.2 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1b PF00579.25 ORF68742 - 0.046 13.0 0.1 0.1 11.9 0.1 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) FAM76 PF16046.5 ORF68742 - 0.057 12.8 0.6 0.085 12.2 0.6 1.2 1 0 0 1 1 1 0 FAM76 protein EnY2 PF10163.9 ORF68742 - 0.093 13.1 2.2 0.41 11.1 0.7 2.7 3 0 0 3 3 3 0 Transcription factor e(y)2 TIR_2 PF13676.6 ORF82163 - 0.00011 22.8 0.0 0.007 17.0 0.0 2.4 2 0 0 2 2 2 1 TIR domain DUF1863 PF08937.11 ORF82163 - 0.00052 20.3 0.1 0.0023 18.2 0.1 2.0 1 1 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TRP PF06011.12 ORF82163 - 0.21 10.3 15.3 0.49 9.0 15.3 1.7 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel GBP PF02263.19 ORF74619 - 2.2e-09 36.9 0.0 8.2e-09 35.1 0.0 1.8 1 1 0 1 1 1 1 Guanylate-binding protein, N-terminal domain PriC PF07445.12 ORF74619 - 0.011 15.7 1.0 0.024 14.6 0.3 1.9 2 0 0 2 2 2 0 Primosomal replication protein priC DUF4229 PF14012.6 ORF74619 - 4.8 7.3 7.1 0.45 10.6 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) peroxidase PF00141.23 ORF31621 - 2e-85 286.1 0.0 1.6e-47 162.2 0.0 2.4 2 0 0 2 2 2 2 Peroxidase He_PIG PF05345.12 ORF32708 - 1.7e-28 98.5 89.9 7.8e-09 35.6 9.5 10.1 10 1 0 10 10 10 6 Putative Ig domain Y_Y_Y PF07495.13 ORF32708 - 6.5e-05 22.8 7.9 1.3 9.0 0.1 5.8 5 0 0 5 5 5 2 Y_Y_Y domain PKD PF00801.20 ORF32708 - 0.00012 21.8 34.9 0.1 12.4 1.7 7.8 7 2 0 7 7 7 5 PKD domain ChitinaseA_N PF08329.10 ORF32708 - 0.00064 19.4 5.0 0.0065 16.1 0.1 3.9 5 0 0 5 5 5 1 Chitinase A, N-terminal domain DUF5305 PF17231.2 ORF32708 - 0.0017 17.8 0.0 0.0017 17.8 0.0 4.2 5 1 0 5 5 5 1 Family of unknown function (DUF5305) DUF5627 PF18620.1 ORF32708 - 8 6.3 17.3 0.39 10.6 2.3 3.6 4 1 0 4 4 4 0 Family of unknown function (DUF5627) AMP-binding PF00501.28 ORF3797 - 2.9e-83 279.8 0.0 3.7e-83 279.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Involucrin_N PF10583.9 ORF3797 - 0.08 13.5 0.0 0.65 10.6 0.0 2.3 2 0 0 2 2 2 0 Involucrin of squamous epithelia N-terminus Clr5 PF14420.6 ORF3797 - 0.36 11.1 2.3 0.42 10.9 0.3 2.2 2 0 0 2 2 2 0 Clr5 domain Phage_T7_Capsid PF05396.11 ORF3503 - 1.8 8.9 20.3 0.34 11.3 0.2 5.5 5 2 1 6 6 6 0 Phage T7 capsid assembly protein DUF637 PF04830.13 ORF3503 - 3 7.6 6.5 1.7 8.5 0.5 3.2 3 1 1 4 4 4 0 Possible hemagglutinin (DUF637) EF-hand_1 PF00036.32 ORF89162 - 4.9e-22 75.8 4.1 0.0002 20.7 0.0 9.1 9 0 0 9 9 9 6 EF hand EF-hand_6 PF13405.6 ORF89162 - 5.6e-22 75.7 9.7 0.00016 21.3 0.0 9.2 9 0 0 9 9 9 5 EF-hand domain EF-hand_7 PF13499.6 ORF89162 - 5.5e-15 55.6 12.5 0.00013 22.4 0.4 6.8 5 1 1 6 6 6 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF89162 - 1.4e-06 27.5 2.6 0.15 11.6 0.0 6.4 6 0 0 6 6 6 1 EF hand EF-hand_8 PF13833.6 ORF89162 - 4.4e-06 26.4 3.9 2.3 8.1 0.0 5.9 6 1 1 7 7 7 2 EF-hand domain pair YyzF PF14116.6 ORF10303 - 0.0065 16.5 9.5 0.047 13.7 0.3 4.0 3 0 0 3 3 3 3 YyzF-like protein AAA_9 PF12781.7 ORF97695 - 8.9e-78 260.4 1.3 8.9e-78 260.4 1.3 2.5 2 1 0 2 2 2 1 ATP-binding dynein motor region MT PF12777.7 ORF97695 - 1.1e-28 100.3 3.7 2.1e-28 99.3 3.7 1.4 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Laminin_I PF06008.14 ORF97695 - 2.3e-05 24.3 8.6 2.3e-05 24.3 8.6 2.1 2 0 0 2 2 2 1 Laminin Domain I Prefoldin PF02996.17 ORF97695 - 0.00048 20.0 3.5 0.00048 20.0 3.5 3.3 2 1 2 4 4 3 1 Prefoldin subunit Spc7 PF08317.11 ORF97695 - 0.0017 17.3 8.0 0.0017 17.3 8.0 3.2 3 0 0 3 3 3 1 Spc7 kinetochore protein ATG16 PF08614.11 ORF97695 - 0.0031 17.8 9.4 0.0031 17.8 9.4 2.0 2 0 0 2 2 2 1 Autophagy protein 16 (ATG16) GAS PF13851.6 ORF97695 - 0.005 16.2 12.0 0.005 16.2 12.0 2.6 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding APG17 PF04108.12 ORF97695 - 0.0086 15.2 4.3 0.0086 15.2 4.3 2.1 2 0 0 2 2 2 1 Autophagy protein Apg17 BRE1 PF08647.11 ORF97695 - 0.0089 16.1 16.2 0.0089 16.1 16.2 3.2 2 1 0 2 2 2 1 BRE1 E3 ubiquitin ligase DHR10 PF18595.1 ORF97695 - 0.012 15.7 13.9 0.012 15.7 13.9 2.7 3 1 0 3 3 1 0 Designed helical repeat protein 10 domain DUF3584 PF12128.8 ORF97695 - 0.045 11.3 16.1 0.085 10.4 8.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) rve_3 PF13683.6 ORF97695 - 0.063 13.1 0.2 0.34 10.7 0.0 2.3 2 0 0 2 2 2 0 Integrase core domain FERM_M PF00373.18 ORF97695 - 0.088 13.2 1.1 0.37 11.2 0.1 2.2 2 1 0 2 2 2 0 FERM central domain Laminin_II PF06009.12 ORF97695 - 0.22 11.6 12.8 0.026 14.5 5.9 2.6 2 0 0 2 2 2 0 Laminin Domain II DUF1664 PF07889.12 ORF97695 - 0.25 11.4 5.9 1.7 8.7 0.7 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Sec8_exocyst PF04048.14 ORF97695 - 0.32 10.9 11.4 0.17 11.7 0.4 3.5 2 1 1 3 3 3 0 Sec8 exocyst complex component specific domain Exonuc_VII_L PF02601.15 ORF97695 - 0.79 9.2 11.6 0.084 12.4 4.6 2.1 2 0 0 2 2 2 0 Exonuclease VII, large subunit DUF948 PF06103.11 ORF97695 - 0.79 10.0 3.9 2.1 8.7 0.8 2.6 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) BLOC1_2 PF10046.9 ORF97695 - 0.83 10.0 14.3 2.3 8.6 6.2 3.1 2 2 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 KxDL PF10241.9 ORF97695 - 0.96 9.8 9.3 0.69 10.2 1.9 3.6 3 1 1 4 4 3 0 Uncharacterized conserved protein NCD2 PF04905.13 ORF97695 - 1.2 9.1 5.3 0.95 9.4 0.1 2.8 2 0 0 2 2 2 0 NAB conserved region 2 (NCD2) Sec34 PF04136.15 ORF97695 - 1.4 8.8 9.3 0.45 10.4 3.3 2.6 2 0 0 2 2 2 0 Sec34-like family UPF0242 PF06785.11 ORF97695 - 1.4 9.0 24.6 0.59 10.2 9.4 2.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus SesA PF17107.5 ORF97695 - 1.4 9.1 9.8 2 8.6 6.1 2.9 2 1 1 3 3 3 0 N-terminal domain on NACHT_NTPase and P-loop NTPases MIEAP PF16026.5 ORF97695 - 1.4 9.0 7.1 0.2 11.8 0.8 2.5 2 1 0 2 2 2 0 Mitochondria-eating protein DUF4201 PF13870.6 ORF97695 - 1.5 8.5 21.6 0.019 14.7 9.3 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4201) DUF3435 PF11917.8 ORF97695 - 1.9 7.3 8.3 4.1 6.2 8.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Cep57_CLD_2 PF14197.6 ORF97695 - 2.7 8.1 14.7 0.14 12.2 8.5 2.1 2 0 0 2 2 1 0 Centrosome localisation domain of PPC89 Syntaxin-6_N PF09177.11 ORF97695 - 3.3 8.3 9.1 1.6 9.4 2.5 3.3 2 1 1 3 3 2 0 Syntaxin 6, N-terminal DUF4407 PF14362.6 ORF97695 - 3.6 6.8 15.4 0.2 11.0 5.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) SpecificRecomb PF10136.9 ORF97695 - 4.7 5.4 4.8 3.8 5.7 0.2 2.0 2 0 0 2 2 2 0 Site-specific recombinase ERM PF00769.19 ORF97695 - 4.9 6.9 25.9 0.086 12.6 18.0 1.9 2 0 0 2 2 2 0 Ezrin/radixin/moesin family DUF4164 PF13747.6 ORF97695 - 5 7.5 12.0 0.95 9.8 7.8 2.0 2 0 0 2 2 1 0 Domain of unknown function (DUF4164) COG2 PF06148.11 ORF97695 - 5.5 7.1 8.9 3.7 7.6 4.9 2.4 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 CENP-F_leu_zip PF10473.9 ORF97695 - 9.7 6.2 23.9 0.099 12.7 13.5 2.5 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 UvrD-helicase PF00580.21 ORF58281 - 2.6e-76 257.2 0.0 7.5e-76 255.6 0.0 1.8 2 0 0 2 2 2 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 ORF58281 - 3.7e-76 256.8 0.0 1.3e-75 254.9 0.0 1.9 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 ORF58281 - 2.7e-32 112.1 0.0 8.4e-32 110.5 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF58281 - 5e-10 39.4 0.0 0.00019 21.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain UvrD_C_2 PF13538.6 ORF58281 - 8.3e-10 38.3 0.0 1.9e-09 37.2 0.0 1.7 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Exonuc_V_gamma PF04257.14 ORF58281 - 0.00032 19.1 2.3 0.0015 16.9 0.3 2.1 2 0 0 2 2 2 1 Exodeoxyribonuclease V, gamma subunit Viral_helicase1 PF01443.18 ORF58281 - 0.00078 19.2 0.0 1 9.1 0.0 3.2 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase PhoH PF02562.16 ORF58281 - 0.063 12.7 0.0 1.9 7.9 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein Pkinase_Tyr PF07714.17 ORF25264 - 2.9e-12 46.5 0.2 6.7e-12 45.2 0.2 1.7 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF25264 - 3.2e-10 39.8 0.3 3.2e-10 39.8 0.3 2.1 2 0 0 2 2 2 1 Protein kinase domain Ank_2 PF12796.7 ORF1803 - 3.4e-15 56.4 0.2 8.8e-09 35.8 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF1803 - 2.1e-12 47.3 0.0 3.5e-07 30.6 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF1803 - 1.2e-07 31.8 0.0 0.33 11.3 0.0 4.3 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF1803 - 2.1e-05 24.5 0.0 16 6.5 0.0 5.5 6 0 0 6 6 6 2 Ankyrin repeat HSP90 PF00183.18 ORF96843 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF96843 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF96843 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF96843 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF96843 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF96843 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF96843 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF92483 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF92483 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF92483 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF92483 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF92483 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF92483 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF92483 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein 2OG-FeII_Oxy_2 PF13532.6 ORF82545 - 1.5e-13 51.4 0.1 1.7e-12 47.9 0.0 2.5 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily Methyltransf_11 PF08241.12 ORF82545 - 7.5e-12 45.7 0.0 2.4e-11 44.1 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF82545 - 4.9e-09 36.8 0.0 1.9e-08 34.9 0.0 2.1 1 0 0 1 1 1 1 Methyltransferase domain RRM_1 PF00076.22 ORF82545 - 4.1e-08 32.9 0.3 3e-05 23.7 0.0 3.2 3 0 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Methyltransf_12 PF08242.12 ORF82545 - 2.6e-05 24.9 0.1 9.4e-05 23.1 0.1 2.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF82545 - 5.8e-05 22.9 0.1 0.00018 21.3 0.1 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF82545 - 0.0013 18.6 0.0 0.0061 16.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain HSP90 PF00183.18 ORF76274 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF76274 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF76274 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF76274 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF76274 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF76274 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF76274 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF6493 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF6493 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF6493 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF6493 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF6493 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF6493 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF6493 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF44015 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF44015 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF44015 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF44015 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF44015 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF44015 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF44015 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF38059 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF38059 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF38059 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF38059 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF38059 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF38059 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF38059 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF36398 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF36398 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF36398 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF36398 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF36398 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF36398 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF36398 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF25293 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF25293 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF25293 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF25293 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF25293 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF25293 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF25293 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein Dynein_C PF18199.1 ORF1082 - 3e-87 292.7 0.0 4.5e-87 292.1 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF1082 - 3e-48 163.7 0.1 5.6e-48 162.9 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF1082 - 1.5e-35 121.8 0.1 8.6e-35 119.4 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain Baculo_PEP_C PF04513.12 ORF85886 - 0.78 9.8 17.8 1.3 9.1 1.8 3.8 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Apolipoprotein PF01442.18 ORF85886 - 1.2 9.0 44.8 0.61 9.9 24.2 3.2 2 2 0 2 2 2 0 Apolipoprotein A1/A4/E domain Sucrose_synth PF00862.19 ORF85886 - 1.3 7.2 4.3 1.8 6.7 4.3 1.2 1 0 0 1 1 1 0 Sucrose synthase DUF445 PF04286.12 ORF85886 - 5 6.8 15.4 8.6 6.1 15.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF445) NPV_P10 PF05531.12 ORF85886 - 6.7 7.3 23.8 28 5.3 2.7 5.9 3 1 2 5 5 5 0 Nucleopolyhedrovirus P10 protein HELP PF03451.14 ORF100634 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF100634 - 2.3e-18 66.2 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF100634 - 4e-09 36.6 0.0 0.00011 22.4 0.0 4.7 4 1 0 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain Kinesin PF00225.23 ORF26884 - 1.7e-96 323.1 0.0 2.8e-96 322.3 0.0 1.3 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF26884 - 1.5e-20 73.7 0.3 9.7e-20 71.0 0.0 2.5 3 0 0 3 3 3 1 Microtubule binding Kinesin_assoc PF16183.5 ORF26884 - 6.2e-05 23.2 2.0 6.2e-05 23.2 2.0 4.1 3 2 1 4 4 4 1 Kinesin-associated MPS2 PF17060.5 ORF26884 - 0.00072 18.9 1.8 0.00072 18.9 1.8 1.7 2 0 0 2 2 2 1 Monopolar spindle protein 2 FAM76 PF16046.5 ORF26884 - 0.024 14.0 0.2 0.024 14.0 0.2 2.7 2 1 0 2 2 2 0 FAM76 protein UPF0242 PF06785.11 ORF26884 - 0.63 10.1 12.0 1.1 9.3 0.5 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF4510 PF14971.6 ORF26884 - 1.4 9.3 7.3 0.93 9.8 0.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4510) Hpt PF01627.23 ORF26884 - 2.4 8.5 11.0 0.1 12.9 1.6 3.0 3 0 0 3 3 3 0 Hpt domain PKcGMP_CC PF16808.5 ORF26884 - 4.4 7.2 9.6 0.61 10.0 4.8 2.1 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase ERM PF00769.19 ORF26884 - 5.8 6.7 22.0 3.4 7.4 4.7 2.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family MerR-DNA-bind PF09278.11 ORF26884 - 7.7 7.1 14.3 0.28 11.8 5.8 2.7 2 1 0 2 2 2 0 MerR, DNA binding Atg14 PF10186.9 ORF26884 - 9.5 5.2 11.4 5.3 6.0 0.8 2.2 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 7tm_3 PF00003.22 ORF23786 - 0.00046 20.0 1.5 0.68 9.6 0.3 2.5 2 0 0 2 2 2 2 7 transmembrane sweet-taste receptor of 3 GCPR BCD PF15461.6 ORF23786 - 0.0085 15.6 1.3 0.0085 15.6 1.3 2.1 2 1 0 2 2 2 1 Beta-carotene 15,15'-dioxygenase DUF1345 PF07077.11 ORF23786 - 0.014 15.1 0.0 0.83 9.3 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1345) MscS_TM PF12794.7 ORF23786 - 0.043 12.7 0.0 0.38 9.6 0.0 2.6 3 0 0 3 3 3 0 Mechanosensitive ion channel inner membrane domain 1 Herpes_LMP1 PF05297.11 ORF23786 - 7.3 5.7 5.1 18 4.4 5.1 1.6 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) STAS PF01740.21 ORF31847 - 2e-11 43.5 0.0 4.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 STAS domain Sulfate_transp PF00916.20 ORF31847 - 3.2e-09 36.0 2.3 6e-09 35.1 2.3 1.5 1 0 0 1 1 1 1 Sulfate permease family cNMP_binding PF00027.29 ORF31847 - 0.00017 21.6 0.0 0.003 17.6 0.0 2.4 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain STAS_2 PF13466.6 ORF31847 - 0.00038 20.7 0.5 0.00038 20.7 0.5 2.9 3 1 0 3 3 3 1 STAS domain MFS_MOT1 PF16983.5 ORF31847 - 0.0039 17.6 0.9 0.0039 17.6 0.9 2.5 2 0 0 2 2 2 1 Molybdate transporter of MFS superfamily PsaA_PsaB PF00223.19 ORF103178 - 1.1e-156 523.0 45.5 1.1e-126 423.9 27.4 3.8 1 1 1 2 2 2 2 Photosystem I psaA/psaB protein HTH_9 PF08221.11 ORF103178 - 0.014 15.4 1.2 0.49 10.5 1.0 2.6 1 1 1 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain cNMP_binding PF00027.29 ORF5354 - 2.7e-25 88.2 1.5 7.1e-07 29.2 0.0 4.3 4 0 0 4 4 4 4 Cyclic nucleotide-binding domain Rep_Org_C PF06926.11 ORF5354 - 0.074 13.4 0.0 0.15 12.4 0.0 1.5 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus MM_CoA_mutase PF01642.22 ORF17425 - 1e-236 786.4 0.5 1.2e-236 786.2 0.5 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase B12-binding PF02310.19 ORF17425 - 4.1e-16 59.1 0.8 8.2e-16 58.1 0.1 1.9 2 0 0 2 2 2 1 B12 binding domain sCache_like PF16736.5 ORF17425 - 0.0019 18.3 1.4 0.0037 17.3 1.2 1.6 1 1 0 1 1 1 1 Single Cache-like RE_Eco29kI PF09517.10 ORF17425 - 0.054 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Eco29kI restriction endonuclease TetR_C_11 PF16859.5 ORF17425 - 0.11 12.8 4.2 0.12 12.7 2.1 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain HELP PF03451.14 ORF99488 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF99488 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF99488 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain HELP PF03451.14 ORF81003 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF81003 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF81003 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain HELP PF03451.14 ORF75781 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF75781 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF75781 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain HELP PF03451.14 ORF38949 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF38949 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF38949 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain HELP PF03451.14 ORF105671 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF105671 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF105671 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain tRNA-synt_1 PF00133.22 ORF103820 - 5.4e-74 249.5 0.0 8.7e-74 248.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF103820 - 2.8e-23 82.5 0.2 1e-22 80.7 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF103820 - 0.0029 16.4 0.2 0.07 11.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF103820 - 0.029 13.7 0.0 0.065 12.6 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain PKD_channel PF08016.12 ORF30465 - 3.6e-16 58.9 22.0 9.7e-16 57.5 22.0 1.6 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF30465 - 6e-12 45.3 20.9 9.5e-12 44.7 20.9 1.3 1 0 0 1 1 1 1 Ion transport protein DUF1664 PF07889.12 ORF30465 - 0.0064 16.5 2.1 0.072 13.1 0.4 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1664) FYRC PF05965.14 ORF30465 - 0.051 13.7 0.1 0.17 12.1 0.0 1.9 2 0 0 2 2 2 0 F/Y rich C-terminus NPV_P10 PF05531.12 ORF30465 - 0.066 13.7 0.7 4.6 7.8 0.3 2.5 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Tropomyosin_1 PF12718.7 ORF30465 - 2.1 8.5 5.0 1.2 9.3 0.1 2.2 2 0 0 2 2 2 0 Tropomyosin like ART PF01129.18 ORF76015 - 2.6e-15 56.4 0.0 6e-15 55.1 0.0 1.5 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 ORF76015 - 0.00038 19.9 0.1 0.22 10.9 0.0 2.2 2 0 0 2 2 2 2 ADP-ribosyltransferase exoenzyme OpuAC PF04069.12 ORF64750 - 0.0051 16.4 0.0 0.0086 15.7 0.0 1.3 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system ThiW PF09512.10 ORF64750 - 0.06 13.4 0.2 0.13 12.4 0.2 1.5 1 0 0 1 1 1 0 Thiamine-precursor transporter protein (ThiW) DUF2555 PF10742.9 ORF64750 - 0.41 10.5 2.1 2.5 8.0 0.0 3.2 5 0 0 5 5 5 0 Protein of unknown function (DUF2555) RE_BstXI PF09552.10 ORF96437 - 0.07 12.3 0.1 0.11 11.7 0.1 1.2 1 0 0 1 1 1 0 BstXI restriction endonuclease tRNA-synt_1 PF00133.22 ORF8656 - 5.3e-74 249.5 0.0 8.7e-74 248.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF8656 - 2.8e-23 82.6 0.2 1e-22 80.8 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF8656 - 0.0029 16.4 0.2 0.07 11.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF8656 - 0.029 13.7 0.0 0.065 12.6 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 ORF83067 - 5.3e-74 249.5 0.0 8.7e-74 248.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF83067 - 2.8e-23 82.6 0.2 1e-22 80.8 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF83067 - 0.0029 16.4 0.2 0.07 11.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF83067 - 0.029 13.7 0.0 0.065 12.6 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 ORF111616 - 5.3e-74 249.5 0.0 8.7e-74 248.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF111616 - 2.7e-23 82.6 0.2 1e-22 80.8 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF111616 - 0.0029 16.4 0.2 0.07 11.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF111616 - 0.028 13.7 0.0 0.065 12.6 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain Helicase_C PF00271.31 ORF87098 - 1.1e-17 64.3 0.0 2.2e-17 63.4 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 ORF87098 - 3.7e-05 24.4 0.2 3.7e-05 24.4 0.2 2.1 2 0 0 2 2 2 1 RecQ zinc-binding HTH_40 PF14493.6 ORF87098 - 0.0028 18.1 0.0 0.016 15.7 0.0 2.3 1 0 0 1 1 1 1 Helix-turn-helix domain Replic_Relax PF13814.6 ORF87098 - 0.0094 16.0 0.8 0.038 14.0 0.5 2.1 2 0 0 2 2 2 1 Replication-relaxation RQC PF09382.10 ORF87098 - 0.039 13.7 0.0 1.1 9.0 0.0 2.6 2 0 0 2 2 2 0 RQC domain T2SSN PF01203.19 ORF87098 - 0.098 12.9 0.7 0.23 11.7 0.1 1.9 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein N XPC-binding PF09280.11 ORF87098 - 6.5 6.6 6.7 26 4.7 0.6 3.4 3 0 0 3 3 3 0 XPC-binding domain Helicase_C PF00271.31 ORF22180 - 1.1e-17 64.3 0.0 2.2e-17 63.4 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 ORF22180 - 3.7e-05 24.4 0.2 3.7e-05 24.4 0.2 2.1 2 0 0 2 2 2 1 RecQ zinc-binding HTH_40 PF14493.6 ORF22180 - 0.0028 18.1 0.0 0.016 15.7 0.0 2.3 1 0 0 1 1 1 1 Helix-turn-helix domain Replic_Relax PF13814.6 ORF22180 - 0.0094 16.0 0.8 0.038 14.0 0.5 2.1 2 0 0 2 2 2 1 Replication-relaxation RQC PF09382.10 ORF22180 - 0.039 13.7 0.0 1.1 9.0 0.0 2.6 2 0 0 2 2 2 0 RQC domain T2SSN PF01203.19 ORF22180 - 0.098 12.9 0.7 0.23 11.7 0.1 1.9 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein N XPC-binding PF09280.11 ORF22180 - 6.5 6.6 6.7 26 4.7 0.6 3.4 3 0 0 3 3 3 0 XPC-binding domain ABC_tran PF00005.27 ORF98249 - 4.9e-44 150.2 5.7 1e-21 77.9 0.2 3.4 4 1 0 4 4 2 2 ABC transporter ABC_tran_Xtn PF12848.7 ORF98249 - 2.6e-20 72.2 4.3 2.6e-20 72.2 4.3 3.0 4 0 0 4 4 2 1 ABC transporter AAA_21 PF13304.6 ORF98249 - 5.5e-16 59.3 3.8 0.0022 17.9 0.3 4.5 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF98249 - 1.5e-10 40.9 5.6 0.0022 17.5 0.0 4.0 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain NACHT PF05729.12 ORF98249 - 2.7e-07 30.7 0.0 0.019 14.9 0.0 2.4 2 0 0 2 2 2 2 NACHT domain NB-ARC PF00931.22 ORF98249 - 3.3e-07 29.8 0.0 0.0024 17.1 0.0 2.8 2 1 0 2 2 2 2 NB-ARC domain MMR_HSR1 PF01926.23 ORF98249 - 5.8e-07 29.6 1.9 0.012 15.7 0.0 3.8 3 1 1 4 4 3 2 50S ribosome-binding GTPase AAA_14 PF13173.6 ORF98249 - 8.5e-07 29.1 5.2 0.003 17.6 0.3 3.9 3 1 0 5 5 4 2 AAA domain AAA_28 PF13521.6 ORF98249 - 1.2e-06 28.9 0.0 0.054 13.7 0.0 2.9 2 1 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 ORF98249 - 1.5e-06 28.2 0.1 0.073 13.0 0.0 3.1 2 0 0 2 2 2 2 RsgA GTPase AAA_24 PF13479.6 ORF98249 - 1.7e-06 27.9 0.5 0.046 13.4 0.0 3.3 3 1 0 3 3 3 2 AAA domain AAA PF00004.29 ORF98249 - 1.9e-06 28.3 0.7 0.025 15.0 0.0 4.0 3 2 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF98249 - 2e-06 28.1 1.8 0.018 15.3 0.1 3.3 3 1 0 3 3 2 2 AAA domain AAA_29 PF13555.6 ORF98249 - 2.8e-06 27.0 0.3 0.019 14.7 0.0 3.4 3 0 0 3 3 3 2 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF98249 - 1.1e-05 25.9 0.0 0.19 12.1 0.0 2.6 2 0 0 2 2 2 2 AAA ATPase domain AAA_33 PF13671.6 ORF98249 - 4.3e-05 23.7 0.0 0.057 13.6 0.0 3.2 3 0 0 3 3 3 1 AAA domain cobW PF02492.19 ORF98249 - 9.9e-05 22.0 0.1 0.11 12.1 0.1 2.9 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 ORF98249 - 0.00015 21.9 0.0 0.92 9.7 0.0 2.8 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase MobB PF03205.14 ORF98249 - 0.00023 21.1 0.3 0.091 12.7 0.0 3.0 3 0 0 3 3 2 1 Molybdopterin guanine dinucleotide synthesis protein B ZnuA PF01297.17 ORF98249 - 0.00031 20.2 2.3 0.00055 19.4 0.3 2.1 2 0 0 2 2 2 1 Zinc-uptake complex component A periplasmic NTPase_1 PF03266.15 ORF98249 - 0.00034 20.5 0.4 0.66 9.9 0.1 3.1 2 0 0 2 2 2 1 NTPase PduV-EutP PF10662.9 ORF98249 - 0.00042 20.1 0.1 1.3 8.7 0.0 3.1 3 0 0 3 3 2 2 Ethanolamine utilisation - propanediol utilisation AAA_18 PF13238.6 ORF98249 - 0.00055 20.5 3.6 0.3 11.6 0.0 4.0 4 0 0 4 4 4 1 AAA domain AAA_25 PF13481.6 ORF98249 - 0.00073 19.2 0.0 2.5 7.6 0.0 3.3 3 0 0 3 3 3 2 AAA domain SRP54 PF00448.22 ORF98249 - 0.0011 18.6 0.1 0.87 9.2 0.0 2.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Septin PF00735.18 ORF98249 - 0.0017 17.7 0.1 1.9 7.7 0.0 2.9 2 0 0 2 2 2 1 Septin RNA_helicase PF00910.22 ORF98249 - 0.0018 18.6 2.0 2.2 8.7 0.0 3.5 4 0 0 4 4 3 1 RNA helicase Pox_A32 PF04665.12 ORF98249 - 0.0019 17.7 1.0 1.3 8.4 0.0 2.7 3 0 0 3 3 2 2 Poxvirus A32 protein AAA_30 PF13604.6 ORF98249 - 0.0022 17.7 0.0 0.24 11.1 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF98249 - 0.0022 17.7 26.2 0.029 14.1 11.6 3.8 3 1 1 4 4 4 2 AAA ATPase domain TsaE PF02367.17 ORF98249 - 0.0022 18.0 0.7 0.52 10.3 0.0 2.6 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 ORF98249 - 0.0028 17.6 11.7 0.27 11.1 0.4 4.0 4 0 0 4 4 4 2 ATPase domain predominantly from Archaea Arf PF00025.21 ORF98249 - 0.0032 17.0 0.1 0.31 10.5 0.0 2.8 2 0 0 2 2 2 1 ADP-ribosylation factor family AAA_19 PF13245.6 ORF98249 - 0.0055 17.0 1.3 0.26 11.6 0.0 3.1 2 1 1 3 3 3 1 AAA domain AAA_23 PF13476.6 ORF98249 - 0.0059 17.1 0.0 0.0059 17.1 0.0 5.0 4 1 0 4 4 3 2 AAA domain Dynamin_N PF00350.23 ORF98249 - 0.0077 16.3 7.5 1.6 8.7 0.0 4.0 3 1 1 4 4 4 2 Dynamin family AAA_7 PF12775.7 ORF98249 - 0.0086 15.6 0.0 1.8 8.0 0.0 2.6 2 0 0 2 2 2 1 P-loop containing dynein motor region T2SSE PF00437.20 ORF98249 - 0.027 13.5 0.2 0.35 9.9 0.1 2.4 2 1 0 2 2 2 0 Type II/IV secretion system protein FeoB_N PF02421.18 ORF98249 - 0.028 14.0 0.1 8.6 5.9 0.0 2.6 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA_5 PF07728.14 ORF98249 - 0.043 13.8 0.0 13 5.8 0.0 3.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Adeno_E4_ORF3 PF06931.11 ORF98249 - 0.051 13.8 0.1 0.14 12.4 0.1 1.7 1 0 0 1 1 1 0 Mastadenovirus E4 ORF3 protein IstB_IS21 PF01695.17 ORF98249 - 0.061 13.1 1.0 12 5.6 0.0 3.4 4 0 0 4 4 3 0 IstB-like ATP binding protein ATP-synt_ab PF00006.25 ORF98249 - 0.062 12.9 0.0 2.8 7.5 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_17 PF13207.6 ORF98249 - 0.18 12.2 7.6 2.7 8.4 0.1 4.5 5 0 0 5 5 3 0 AAA domain DUF87 PF01935.17 ORF98249 - 0.19 11.8 0.0 0.19 11.8 0.0 3.8 2 1 1 3 3 3 0 Helicase HerA, central domain AAA_27 PF13514.6 ORF98249 - 0.26 10.9 2.4 1.1 8.8 0.0 2.9 3 1 1 4 4 3 0 AAA domain SRPRB PF09439.10 ORF98249 - 0.45 9.9 5.1 6.1 6.2 0.0 4.1 4 0 0 4 4 4 0 Signal recognition particle receptor beta subunit Abhydrolase_2 PF02230.16 ORF91232 - 3.4e-05 23.8 0.0 8.3e-05 22.5 0.0 1.6 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF91232 - 0.00044 19.9 0.0 0.0017 18.0 0.0 1.9 2 0 0 2 2 2 1 Dienelactone hydrolase family WRNPLPNID PF15017.6 ORF91232 - 2.4 9.1 4.2 4.9 8.1 4.2 1.5 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box Cullin PF00888.22 ORF77628 - 1.5e-146 489.6 7.9 2.4e-146 488.9 7.9 1.3 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF77628 - 1.2e-24 86.1 3.9 2.8e-24 84.9 1.1 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain Cullin PF00888.22 ORF73450 - 1.5e-146 489.6 7.9 2.4e-146 488.9 7.9 1.3 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF73450 - 1.2e-24 86.1 3.9 2.8e-24 84.9 1.1 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain Abhydrolase_2 PF02230.16 ORF64367 - 3.4e-05 23.8 0.0 8.3e-05 22.5 0.0 1.6 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF64367 - 0.00044 19.9 0.0 0.0017 18.0 0.0 1.9 2 0 0 2 2 2 1 Dienelactone hydrolase family WRNPLPNID PF15017.6 ORF64367 - 2.4 9.1 4.2 4.9 8.1 4.2 1.5 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box Cullin PF00888.22 ORF4915 - 1.5e-146 489.6 7.9 2.4e-146 488.9 7.9 1.3 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF4915 - 1.2e-24 86.1 3.9 2.8e-24 84.9 1.1 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain Abhydrolase_2 PF02230.16 ORF111900 - 3.4e-05 23.8 0.0 8.3e-05 22.5 0.0 1.6 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF111900 - 0.00044 19.9 0.0 0.0017 18.0 0.0 1.9 2 0 0 2 2 2 1 Dienelactone hydrolase family WRNPLPNID PF15017.6 ORF111900 - 2.4 9.1 4.2 4.9 8.1 4.2 1.5 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box DUF2512 PF10710.9 NODE_2366_length_2121_cov_472.997603_g1617_i0forward_frame_1 - 2.6 7.7 10.4 0.54 9.9 3.7 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2512) NRDD PF13597.6 ORF32948 - 4e-184 613.5 0.0 5e-184 613.2 0.0 1.1 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Gly_radical PF01228.21 ORF32948 - 2.2e-27 95.7 0.0 7.6e-27 93.9 0.0 2.0 1 0 0 1 1 1 1 Glycine radical ATP-cone PF03477.16 ORF32948 - 4e-21 75.4 1.6 5.1e-20 71.8 1.0 2.4 2 0 0 2 2 2 1 ATP cone domain OrfB_Zn_ribbon PF07282.11 ORF32948 - 0.13 12.2 1.5 0.41 10.6 1.5 1.9 1 0 0 1 1 1 0 Putative transposase DNA-binding domain NOB1_Zn_bind PF08772.11 ORF32948 - 0.36 11.0 3.2 0.84 9.8 3.2 1.6 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Anti-TRAP PF15777.5 ORF32948 - 0.59 10.1 2.8 1.4 9.0 2.8 1.5 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein HypA PF01155.19 ORF32948 - 1.3 9.0 3.7 1.9 8.6 1.9 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1595 PF12760.7 ORF32948 - 1.7 8.7 5.3 1.2 9.2 2.4 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain HECT PF00632.25 NODE_2366_length_2121_cov_472.997603_g1617_i0reverse_frame_2 - 3.1e-91 306.0 0.6 1e-90 304.3 0.0 2.1 2 0 0 2 2 2 1 HECT-domain (ubiquitin-transferase) Bacillus_HBL PF05791.11 NODE_2366_length_2121_cov_472.997603_g1617_i0reverse_frame_2 - 0.015 15.1 3.7 0.91 9.3 1.3 2.6 2 0 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) YtxH PF12732.7 NODE_2366_length_2121_cov_472.997603_g1617_i0reverse_frame_2 - 0.52 10.9 1.7 1.8 9.1 1.7 2.0 1 0 0 1 1 1 0 YtxH-like protein Surp PF01805.20 ORF6052 - 1.4e-39 133.8 0.7 4.6e-20 71.4 0.0 3.1 3 0 0 3 3 3 2 Surp module PRP21_like_P PF12230.8 ORF6052 - 1.6e-39 136.1 26.8 1.6e-39 136.1 26.8 2.9 2 1 0 2 2 2 1 Pre-mRNA splicing factor PRP21 like protein ubiquitin PF00240.23 ORF6052 - 0.074 12.8 0.1 0.24 11.2 0.0 2.0 2 0 0 2 2 2 0 Ubiquitin family NIF PF03031.18 NODE_2388_length_2117_cov_128.043708_g1537_i1forward_frame_2 - 0.00071 19.4 0.3 0.0014 18.4 0.3 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Cullin PF00888.22 ORF9420 - 1.4e-149 499.6 25.5 2.2e-149 499.0 25.5 1.2 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF9420 - 2.1e-06 27.6 3.4 6e-06 26.2 1.6 2.8 2 0 0 2 2 2 1 Cullin protein neddylation domain Mad3_BUB1_I PF08311.12 ORF9420 - 0.15 12.0 3.0 0.19 11.7 0.4 2.5 2 0 0 2 2 2 0 Mad3/BUB1 homology region 1 Cullin PF00888.22 ORF68817 - 1.4e-149 499.6 25.5 2.2e-149 499.0 25.5 1.2 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF68817 - 2.1e-06 27.6 3.4 6e-06 26.2 1.6 2.8 2 0 0 2 2 2 1 Cullin protein neddylation domain Mad3_BUB1_I PF08311.12 ORF68817 - 0.15 12.0 3.0 0.19 11.7 0.4 2.5 2 0 0 2 2 2 0 Mad3/BUB1 homology region 1 Cullin PF00888.22 ORF48129 - 1.4e-149 499.6 25.5 2.2e-149 499.0 25.5 1.2 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF48129 - 2.1e-06 27.6 3.4 6e-06 26.2 1.6 2.8 2 0 0 2 2 2 1 Cullin protein neddylation domain Mad3_BUB1_I PF08311.12 ORF48129 - 0.15 12.0 3.0 0.19 11.7 0.4 2.5 2 0 0 2 2 2 0 Mad3/BUB1 homology region 1 Cullin PF00888.22 ORF35613 - 1.4e-149 499.6 25.5 2.2e-149 499.0 25.5 1.2 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF35613 - 2.1e-06 27.6 3.4 6e-06 26.2 1.6 2.8 2 0 0 2 2 2 1 Cullin protein neddylation domain Mad3_BUB1_I PF08311.12 ORF35613 - 0.15 12.0 3.0 0.19 11.7 0.4 2.5 2 0 0 2 2 2 0 Mad3/BUB1 homology region 1 PPDK_N PF01326.19 ORF67697 - 1e-12 48.0 0.0 1.8e-09 37.3 0.0 2.4 1 1 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DUF3492 PF11997.8 ORF67697 - 0.063 13.0 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3492) Snapin_Pallidin PF14712.6 ORF32854 - 0.16 12.4 0.5 0.57 10.6 0.5 1.9 1 0 0 1 1 1 0 Snapin/Pallidin Snapin_Pallidin PF14712.6 ORF108276 - 0.16 12.4 0.5 0.57 10.6 0.5 1.9 1 0 0 1 1 1 0 Snapin/Pallidin Guanylate_cyc PF00211.20 ORF62451 - 7.8e-15 55.0 0.0 1.4e-14 54.1 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain FGF-BP1 PF06473.12 ORF62451 - 0.6 9.9 3.0 0.31 10.9 0.2 1.8 2 0 0 2 2 2 0 FGF binding protein 1 (FGF-BP1) Sec5 PF15469.6 ORF83557 - 5.4e-13 49.2 0.0 3.6e-12 46.5 0.0 2.3 3 0 0 3 3 3 1 Exocyst complex component Sec5 Vps51 PF08700.11 ORF83557 - 1.8e-09 37.6 0.5 5.6e-09 36.0 0.1 2.1 2 0 0 2 2 2 1 Vps51/Vps67 Dor1 PF04124.12 ORF83557 - 1.3e-05 24.1 0.0 2.4e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Dor1-like family Urb2 PF10441.9 ORF83557 - 0.082 12.8 0.8 0.2 11.6 0.8 1.7 1 0 0 1 1 1 0 Urb2/Npa2 family F-box-like_2 PF13013.6 ORF83557 - 0.34 10.9 2.5 5.9 6.9 0.0 3.1 3 0 0 3 3 3 0 F-box-like domain EF-hand_1 PF00036.32 ORF12787 - 3.1e-18 63.9 4.4 5.7e-05 22.4 0.0 5.4 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF12787 - 3.8e-17 60.7 0.8 0.0068 16.3 0.0 5.7 5 0 0 5 5 5 4 EF-hand domain EF-hand_7 PF13499.6 ORF12787 - 4.7e-13 49.4 10.6 2.4e-07 31.1 0.8 4.4 3 1 2 5 5 5 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF12787 - 2.2e-11 43.4 8.1 6.2e-05 22.8 0.0 4.9 5 1 1 6 6 6 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF12787 - 2.8e-08 32.9 7.5 0.0066 15.9 0.0 5.0 5 0 0 5 5 5 3 EF hand SPARC_Ca_bdg PF10591.9 ORF12787 - 0.0077 16.5 8.0 0.24 11.8 0.2 3.6 4 0 0 4 4 4 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF12787 - 0.038 13.9 0.4 1.6 8.7 0.0 3.0 2 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF12787 - 0.04 14.2 0.7 8.9 6.7 0.0 3.8 4 0 0 4 4 4 0 EF-hand domain AflR PF08493.10 ORF12787 - 1.1 8.6 3.1 1.5 8.2 0.9 2.0 2 0 0 2 2 2 0 Aflatoxin regulatory protein HATPase_c PF02518.26 ORF72651 - 2.4e-25 89.2 0.0 6.3e-25 87.9 0.0 1.8 2 0 0 2 2 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF72651 - 1.4e-16 60.2 5.0 2.1e-16 59.7 0.1 3.5 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain Response_reg PF00072.24 ORF72651 - 1.7e-14 53.9 0.0 5.2e-14 52.4 0.0 1.9 2 0 0 2 2 1 1 Response regulator receiver domain Hpt PF01627.23 ORF72651 - 4.1e-11 43.0 1.5 4.1e-11 43.0 1.5 4.3 4 1 0 4 4 4 1 Hpt domain HAMP PF00672.25 ORF72651 - 3.8e-06 27.2 0.2 1.3e-05 25.5 0.2 2.0 1 0 0 1 1 1 1 HAMP domain HATPase_c_2 PF13581.6 ORF72651 - 0.022 14.7 0.0 0.14 12.2 0.0 2.2 1 1 1 2 2 2 0 Histidine kinase-like ATPase domain KR PF08659.10 ORF72651 - 0.026 14.4 0.4 0.026 14.4 0.4 2.4 2 1 0 2 2 2 0 KR domain OKR_DC_1_N PF03709.15 ORF72651 - 0.032 14.5 0.9 3.4 8.0 0.0 2.7 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain T3SS_ExsE PF18286.1 ORF72651 - 0.052 13.5 0.1 0.22 11.5 0.1 2.1 1 0 0 1 1 1 0 Type III secretion system ExsE OmpH PF03938.14 ORF72651 - 1.7 9.0 10.2 0.5 10.7 0.2 2.9 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) DivIC PF04977.15 ORF72651 - 4.6 7.1 7.5 15 5.4 1.8 3.6 3 0 0 3 3 3 0 Septum formation initiator Syntaxin_2 PF14523.6 ORF72651 - 5.5 7.4 8.7 17 5.9 0.5 4.0 4 0 0 4 4 4 0 Syntaxin-like protein Aquarius_N PF16399.5 ORF55477 - 5.6e-32 110.7 0.0 9.4e-32 110.0 0.0 1.4 1 0 0 1 1 1 1 Intron-binding protein aquarius N-terminus AAA_11 PF13086.6 ORF55477 - 5.9e-26 91.8 0.0 3.6e-25 89.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_12 PF13087.6 ORF55477 - 4.2e-20 72.2 0.0 7e-18 65.0 0.0 2.5 1 1 0 2 2 2 1 AAA domain AAA_19 PF13245.6 ORF55477 - 2.3e-09 37.8 0.0 3.5e-08 33.9 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF55477 - 1.2e-08 34.9 0.0 0.00024 20.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain ResIII PF04851.15 ORF55477 - 0.00039 20.5 0.0 0.00075 19.5 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit UvrD_C_2 PF13538.6 ORF55477 - 0.0022 17.8 0.1 0.0048 16.7 0.1 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_22 PF13401.6 ORF55477 - 0.0037 17.5 0.1 0.055 13.8 0.0 2.8 2 1 1 3 3 3 1 AAA domain AAA PF00004.29 ORF55477 - 0.0049 17.3 0.0 0.02 15.3 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) UvrD-helicase PF00580.21 ORF55477 - 0.062 12.8 0.0 0.11 12.0 0.0 1.6 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain AAA_16 PF13191.6 ORF55477 - 0.066 13.6 0.0 0.25 11.7 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain PhoH PF02562.16 ORF55477 - 0.082 12.4 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_5 PF07728.14 ORF55477 - 0.1 12.6 0.0 0.83 9.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DEAD PF00270.29 ORF55477 - 0.17 11.6 0.0 0.38 10.5 0.0 1.6 2 0 0 2 2 2 0 DEAD/DEAH box helicase MMPL PF03176.15 ORF8753 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF8753 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF8753 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF8753 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF8753 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF8753 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) MMPL PF03176.15 ORF72767 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF72767 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF72767 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF72767 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF72767 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF72767 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) MMPL PF03176.15 ORF68876 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF68876 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF68876 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF68876 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF68876 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF68876 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) MMPL PF03176.15 ORF45174 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF45174 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF45174 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF45174 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF45174 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF45174 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) MMPL PF03176.15 ORF39767 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF39767 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF39767 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF39767 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF39767 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF39767 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) MMPL PF03176.15 ORF37812 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF37812 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF37812 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF37812 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF37812 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF37812 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) Acyl_transf_3 PF01757.22 ORF3743 - 2.2e-15 56.6 40.9 2.2e-15 56.6 40.9 1.9 2 0 0 2 2 2 1 Acyltransferase family X8 PF07983.13 ORF104936 - 9.6e-06 26.2 0.6 3.4e-05 24.4 0.6 2.0 1 0 0 1 1 1 1 X8 domain Glyco_hydro_72 PF03198.14 ORF104936 - 0.0011 18.2 0.0 0.0043 16.4 0.0 1.9 2 0 0 2 2 2 1 Glucanosyltransferase DUF4381 PF14316.6 ORF104936 - 0.11 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) tRNA_edit PF04073.15 ORF108313 - 7.1e-22 77.8 0.5 1.4e-21 76.9 0.5 1.5 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain ProRS-C_1 PF09180.11 ORF108313 - 2.2e-20 72.6 2.4 6.3e-20 71.2 2.4 1.8 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal HGTP_anticodon PF03129.20 ORF108313 - 2.7e-19 69.1 0.2 7.4e-19 67.7 0.2 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 ORF108313 - 3.4e-16 59.7 0.0 1.4e-15 57.7 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Guanylate_cyc PF00211.20 ORF46253 - 7.8e-15 55.0 0.0 1.4e-14 54.2 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain FGF-BP1 PF06473.12 ORF46253 - 0.6 9.9 3.0 0.31 10.9 0.2 1.8 2 0 0 2 2 2 0 FGF binding protein 1 (FGF-BP1) BTB PF00651.31 ORF78839 - 0.00062 20.0 0.0 0.0012 19.0 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain UCH PF00443.29 ORF23502 - 1.7e-43 149.0 0.0 2.1e-43 148.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UBA PF00627.31 ORF23502 - 5.3e-12 45.4 0.1 1.6e-09 37.5 0.0 2.6 2 0 0 2 2 2 2 UBA/TS-N domain UCH_1 PF13423.6 ORF23502 - 4.7e-09 36.3 0.0 1.1e-05 25.3 0.0 3.0 1 1 0 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 ORF23502 - 3e-08 33.9 0.0 8.3e-07 29.2 0.0 2.4 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein Kinesin PF00225.23 ORF105990 - 2.7e-102 342.1 2.4 2.7e-102 342.1 2.4 1.7 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF105990 - 1.4e-22 80.3 0.5 1.4e-22 80.3 0.5 1.9 2 0 0 2 2 2 1 Microtubule binding AAA_7 PF12775.7 ORF105990 - 0.074 12.6 0.0 0.26 10.8 0.0 1.9 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 ORF105990 - 0.14 12.4 1.4 0.27 11.5 0.0 2.2 3 0 0 3 3 3 0 AAA domain DALR_1 PF05746.15 ORF105990 - 0.56 10.4 2.7 0.59 10.3 0.8 2.1 2 0 0 2 2 2 0 DALR anticodon binding domain DUF3858 PF12970.7 ORF105990 - 1.2 9.2 4.7 8.4 6.4 0.1 2.6 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3858) Glycohydro_20b2 PF14845.6 ORF105990 - 5.4 7.7 10.7 44 4.7 8.9 2.8 2 1 0 2 2 2 0 beta-acetyl hexosaminidase like Atg14 PF10186.9 ORF105990 - 6.8 5.7 11.9 17 4.3 11.9 1.6 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 AAA_11 PF13086.6 ORF24116 - 8.7e-21 74.9 0.4 1.2e-18 67.8 0.4 2.3 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF24116 - 8.1e-09 36.0 0.0 6e-08 33.2 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF24116 - 5.6e-08 32.7 0.5 1.8e-06 27.8 0.0 3.1 3 0 0 3 3 3 1 AAA domain UvrD-helicase PF00580.21 ORF24116 - 5.3e-05 22.9 0.1 0.00011 21.9 0.1 1.8 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain DUF2075 PF09848.9 ORF24116 - 0.00019 20.8 0.0 0.00044 19.6 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 ORF24116 - 0.00022 21.3 0.0 0.00067 19.7 0.0 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 ORF24116 - 0.00033 20.5 0.1 0.0011 18.7 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase AAA_22 PF13401.6 ORF24116 - 0.00091 19.5 0.1 0.05 13.9 0.0 2.6 2 0 0 2 2 2 1 AAA domain NHL PF01436.21 ORF24116 - 0.0057 16.6 1.0 0.12 12.4 0.0 3.1 3 0 0 3 3 3 1 NHL repeat AAA PF00004.29 ORF24116 - 0.017 15.6 0.0 0.26 11.7 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 ORF24116 - 0.025 14.2 0.4 0.28 10.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF24116 - 0.041 13.3 0.0 0.097 12.1 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein AAA_16 PF13191.6 ORF24116 - 0.047 14.1 0.0 0.15 12.5 0.0 1.9 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 ORF24116 - 0.15 12.1 0.0 0.68 9.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ABC_membrane_2 PF06472.15 ORF33880 - 2.6e-77 259.9 0.2 4.2e-77 259.2 0.2 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 ABC_tran PF00005.27 ORF33880 - 6.7e-16 59.0 0.0 1.6e-15 57.9 0.0 1.7 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF33880 - 0.00053 19.5 0.2 0.71 9.3 0.0 2.9 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF33880 - 0.068 13.7 0.0 0.17 12.4 0.0 1.8 1 1 0 1 1 1 0 AAA domain E3_UbLigase_R4 PF13764.6 ORF76283 - 1.4e-80 271.6 24.2 1.7e-80 271.3 24.2 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 TetR_C_22 PF17928.1 ORF76283 - 0.074 13.4 0.1 1.7 9.0 0.0 3.0 3 1 1 4 4 4 0 Tetracyclin repressor-like, C-terminal domain U62_UL91 PF17442.2 ORF76283 - 0.081 12.9 0.2 0.081 12.9 0.2 2.3 2 0 0 2 2 2 0 Functional domain of U62 and UL91 proteins E3_UbLigase_R4 PF13764.6 ORF71188 - 1.4e-80 271.6 24.2 1.7e-80 271.3 24.2 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 TetR_C_22 PF17928.1 ORF71188 - 0.074 13.4 0.1 1.7 9.0 0.0 3.0 3 1 1 4 4 4 0 Tetracyclin repressor-like, C-terminal domain U62_UL91 PF17442.2 ORF71188 - 0.081 12.9 0.2 0.081 12.9 0.2 2.3 2 0 0 2 2 2 0 Functional domain of U62 and UL91 proteins E3_UbLigase_R4 PF13764.6 ORF53604 - 1.4e-80 271.6 24.2 1.7e-80 271.3 24.2 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 TetR_C_22 PF17928.1 ORF53604 - 0.074 13.4 0.1 1.7 9.0 0.0 3.0 3 1 1 4 4 4 0 Tetracyclin repressor-like, C-terminal domain U62_UL91 PF17442.2 ORF53604 - 0.081 12.9 0.2 0.081 12.9 0.2 2.3 2 0 0 2 2 2 0 Functional domain of U62 and UL91 proteins VWA_3 PF13768.6 ORF75488 - 2.4e-22 79.6 0.0 4.1e-22 78.8 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF75488 - 1.9e-12 47.7 0.0 4.5e-12 46.5 0.0 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF75488 - 5.8e-12 46.2 3.4 1.1e-11 45.3 0.3 2.7 3 0 0 3 3 3 1 von Willebrand factor type A domain CENP-T_C PF15511.6 ORF75488 - 2.2e-07 30.9 0.0 6.5e-07 29.4 0.0 1.7 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold vWA-TerF-like PF10138.9 ORF75488 - 3.2e-05 24.1 0.0 8.1e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 vWA found in TerF C terminus CBFD_NFYB_HMF PF00808.23 ORF75488 - 0.0025 18.1 0.0 0.012 15.9 0.0 2.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF75488 - 0.0037 17.3 0.0 0.013 15.5 0.0 2.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit CENP-S PF15630.6 ORF75488 - 0.016 15.6 0.0 0.053 13.9 0.0 1.9 1 0 0 1 1 1 0 CENP-S protein TAF PF02969.17 ORF75488 - 0.087 13.0 0.2 0.36 11.0 0.0 2.2 2 0 0 2 2 2 0 TATA box binding protein associated factor (TAF) ABC2_membrane_3 PF12698.7 ORF75488 - 0.11 11.6 0.5 0.25 10.4 0.5 1.5 1 0 0 1 1 1 0 ABC-2 family transporter protein Ion_trans PF00520.31 ORF64090 - 7.3e-14 51.6 11.9 3.3e-09 36.4 0.5 2.3 2 0 0 2 2 2 2 Ion transport protein B3_4 PF03483.17 ORF64090 - 0.25 11.0 1.0 0.44 10.2 1.0 1.3 1 0 0 1 1 1 0 B3/4 domain tRNA_synt_2f PF02092.17 ORF32791 - 8.2e-216 718.0 0.0 1.2e-215 717.4 0.0 1.3 1 0 0 1 1 1 1 Glycyl-tRNA synthetase beta subunit DALR_1 PF05746.15 ORF32791 - 1e-08 35.4 0.7 3.3e-08 33.7 0.7 1.9 1 0 0 1 1 1 1 DALR anticodon binding domain Dynein_C PF18199.1 ORF14895 - 9.4e-109 363.3 0.0 1.3e-108 362.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF14895 - 1.1e-65 220.5 0.0 2.2e-65 219.5 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF14895 - 3.9e-46 156.0 0.0 7.4e-46 155.1 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain AP_endonuc_2 PF01261.24 ORF102081 - 0.0069 15.8 1.6 2.1 7.7 0.2 2.5 2 0 0 2 2 2 2 Xylose isomerase-like TIM barrel DUF1374 PF07118.11 ORF102081 - 0.032 14.7 0.8 0.14 12.6 0.8 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1374) FH2 PF02181.23 ORF94098 - 7.2e-55 186.6 0.0 1e-54 186.1 0.0 1.2 1 0 0 1 1 1 1 Formin Homology 2 Domain ComS PF17584.2 ORF94098 - 0.021 14.3 2.1 2.4 7.7 0.2 2.7 2 0 0 2 2 2 0 Bacillus competence protein S Spc7 PF08317.11 ORF94098 - 0.024 13.5 2.1 0.04 12.8 2.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Peptidase_M16_C PF05193.21 ORF74773 - 3.3e-11 43.5 0.0 8.1e-11 42.3 0.0 1.6 1 0 0 1 1 1 1 Peptidase M16 inactive domain HTH_37 PF13744.6 ORF74773 - 0.13 12.2 0.7 0.45 10.5 0.2 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Peptidase_C2 PF00648.21 ORF70655 - 3.3e-79 266.0 0.0 4.2e-79 265.7 0.0 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF70655 - 0.00043 20.6 0.0 0.0025 18.1 0.0 2.2 2 0 0 2 2 2 1 Calpain large subunit, domain III Autotransporter PF03797.19 ORF43444 - 8e-45 153.5 30.8 8e-45 153.5 30.8 3.2 2 1 1 3 3 3 1 Autotransporter beta-domain Pertactin PF03212.14 ORF43444 - 1.7e-05 24.7 3.4 1.7e-05 24.7 3.4 2.3 2 0 0 2 2 2 1 Pertactin ORF_2_N PF18492.1 ORF43444 - 0.069 13.4 0.2 0.18 12.0 0.2 1.7 1 0 0 1 1 1 0 Open reading frame 2 N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks5.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks5.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks5.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks5.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Methyltransf_24 PF13578.6 NODE_25085_length_837_cov_260.895262_g19557_i0forward_frame_3 - 0.00031 21.7 0.0 0.00051 21.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_25085_length_837_cov_260.895262_g19557_i0forward_frame_3 - 0.17 12.6 0.0 3.1 8.5 0.0 2.4 1 1 0 1 1 1 0 Methyltransferase domain RCC1_2 PF13540.6 NODE_25079_length_837_cov_352.152120_g2606_i2reverse_frame_2 - 1.4e-09 37.4 12.3 0.062 13.1 0.2 5.5 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_25079_length_837_cov_352.152120_g2606_i2reverse_frame_2 - 0.0007 20.0 0.2 9.5 6.8 0.0 4.6 4 1 1 5 5 5 1 Spectrin repeat Crystall PF00030.19 NODE_25079_length_837_cov_352.152120_g2606_i2reverse_frame_2 - 0.02 15.1 0.3 7 6.9 0.0 2.5 2 0 0 2 2 2 0 Beta/Gamma crystallin DUF155 PF02582.14 NODE_25079_length_837_cov_352.152120_g2606_i2reverse_frame_2 - 0.029 14.5 4.7 16 5.6 0.6 4.6 3 1 1 4 4 4 0 Uncharacterised ACR, YagE family COG1723 FtsQ PF03799.15 NODE_25079_length_837_cov_352.152120_g2606_i2reverse_frame_2 - 0.029 15.2 0.0 32 5.4 0.0 3.4 1 1 3 4 4 4 0 Cell division protein FtsQ PLN_propep PF16485.5 NODE_25079_length_837_cov_352.152120_g2606_i2reverse_frame_2 - 0.04 13.6 1.2 6.8 6.5 0.0 3.2 3 0 0 3 3 3 0 Protealysin propeptide Cyclophil_like PF04126.13 NODE_25079_length_837_cov_352.152120_g2606_i2reverse_frame_2 - 0.057 13.2 0.1 0.14 12.0 0.1 1.7 2 0 0 2 2 2 0 Cyclophilin-like Cerato-platanin PF07249.12 NODE_25079_length_837_cov_352.152120_g2606_i2reverse_frame_2 - 1.3 9.2 7.6 5.1 7.3 0.6 3.3 1 1 3 4 4 4 0 Cerato-platanin DUF4687 PF15747.5 NODE_25079_length_837_cov_352.152120_g2606_i2reverse_frame_2 - 3.8 8.0 5.6 14 6.2 0.2 3.3 1 1 3 4 4 4 0 Domain of unknown function (DUF4687) ISK_Channel PF02060.15 NODE_25079_length_837_cov_352.152120_g2606_i2forward_frame_2 - 0.77 9.5 3.7 2.2 8.0 0.8 2.6 2 1 0 2 2 2 0 Slow voltage-gated potassium channel Peptidase_S10 PF00450.22 NODE_25074_length_837_cov_1003.501247_g5931_i8forward_frame_3 - 1.9e-44 152.7 0.8 8.7e-39 134.1 1.5 2.0 1 1 1 2 2 2 2 Serine carboxypeptidase DUF418 PF04235.12 ORF99178 - 0.0072 16.3 7.2 0.0079 16.1 6.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF418) PRT_C PF08372.10 ORF99178 - 0.087 12.6 1.2 0.25 11.1 0.1 2.0 1 1 0 2 2 2 0 Plant phosphoribosyltransferase C-terminal MFS_1 PF07690.16 ORF9819 - 6.7e-07 28.6 3.7 6.7e-07 28.6 3.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily FtsX PF02687.21 ORF9819 - 4.9 7.7 15.0 1.3 9.6 3.1 3.0 1 1 1 2 2 2 0 FtsX-like permease family DUF4440 PF14534.6 ORF97074 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF97074 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF97074 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF97074 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF97074 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF97074 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Esterase PF00756.20 ORF952 - 2.8e-72 243.4 0.0 3.2e-72 243.2 0.0 1.0 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF952 - 1.3e-06 28.1 0.0 1.9e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Esterase_phd PF10503.9 ORF952 - 1.6e-05 24.5 0.0 0.092 12.2 0.0 2.1 2 0 0 2 2 2 2 Esterase PHB depolymerase Hydrolase_4 PF12146.8 ORF952 - 3e-05 23.4 0.3 0.0019 17.5 0.1 2.1 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Chlorophyllase2 PF12740.7 ORF952 - 0.0015 17.5 0.0 0.002 17.1 0.0 1.4 1 1 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_6 PF12697.7 ORF952 - 0.002 18.8 2.1 0.0046 17.6 0.2 2.0 1 1 1 2 2 2 1 Alpha/beta hydrolase family Lipase_3 PF01764.25 ORF952 - 0.014 15.3 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_1 PF00561.20 ORF952 - 0.019 14.6 1.4 0.31 10.7 0.1 2.4 1 1 1 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 ORF952 - 0.038 13.9 0.4 1.4 8.7 0.4 2.4 1 1 0 1 1 1 0 alpha/beta hydrolase fold Chlorophyllase PF07224.11 ORF952 - 0.058 12.4 0.0 0.089 11.8 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase EF-hand_7 PF13499.6 ORF93525 - 2.1e-10 40.9 1.5 1.7e-05 25.2 0.1 2.5 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF93525 - 1.4e-09 36.8 0.3 0.00029 20.2 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF93525 - 2e-09 36.6 0.3 0.00015 21.4 0.0 3.1 2 0 0 2 2 2 2 EF-hand domain Ion_trans PF00520.31 ORF93525 - 6.1e-09 35.5 5.8 7.9e-09 35.1 5.8 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_5 PF13202.6 ORF93525 - 4.3e-08 32.3 0.4 0.00028 20.2 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF93525 - 2.3e-05 24.2 0.5 0.22 11.4 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EI24 PF07264.11 ORF93525 - 0.0079 16.5 2.7 0.011 16.0 2.7 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) SPARC_Ca_bdg PF10591.9 ORF93525 - 0.047 14.0 0.3 0.26 11.6 0.3 2.0 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region AMPK1_CBM PF16561.5 ORF93352 - 1.7e-07 31.3 0.6 3.7e-07 30.3 0.6 1.5 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase DUF4440 PF14534.6 ORF92496 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF92496 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF92496 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF92496 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF92496 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF92496 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide AI-2E_transport PF01594.16 ORF86994 - 9.5e-68 228.8 23.3 1.1e-67 228.6 23.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter Pro_isomerase PF00160.21 ORF86662 - 1.3e-11 45.1 0.0 2.6e-11 44.1 0.0 1.5 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rotamase PF00639.21 ORF86662 - 4.9e-10 40.2 7.7 4.8e-09 37.0 6.0 2.9 1 1 1 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF86662 - 1.2e-08 35.5 1.4 1.2e-08 35.5 1.4 2.2 1 1 1 2 2 2 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF86662 - 0.00014 22.7 4.5 0.00016 22.5 0.2 2.3 2 0 0 2 2 2 1 PPIC-type PPIASE domain WW PF00397.26 ORF86662 - 0.00036 20.5 0.3 0.00077 19.5 0.3 1.6 1 0 0 1 1 1 1 WW domain Dicty_REP PF05086.12 ORF86304 - 9.7 4.0 4.9 13 3.6 4.9 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein DUF4194 PF13835.6 ORF82566 - 0.12 12.1 1.4 0.86 9.3 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4194) SPATA3 PF15662.5 ORF82566 - 7 7.2 7.5 21 5.7 3.0 2.1 2 0 0 2 2 2 0 Spermatogenesis-associated protein 3 family FliJ PF02050.16 ORF825 - 0.11 12.7 3.1 3.1 8.1 0.0 3.2 2 1 2 4 4 4 0 Flagellar FliJ protein Cep57_CLD_2 PF14197.6 ORF825 - 1.1 9.3 5.7 18 5.5 0.1 3.4 3 0 0 3 3 3 0 Centrosome localisation domain of PPC89 DnaJ PF00226.31 ORF8224 - 1.5e-09 37.8 0.0 3.6e-09 36.6 0.0 1.7 1 0 0 1 1 1 1 DnaJ domain HTH_18 PF12833.7 ORF81232 - 4.4e-26 91.0 1.7 8.1e-26 90.1 1.2 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain AraC_binding PF02311.19 ORF81232 - 9.5e-24 83.8 1.9 9.5e-24 83.8 1.9 1.7 2 0 0 2 2 2 1 AraC-like ligand binding domain HTH_AraC PF00165.23 ORF81232 - 1.5e-22 79.1 0.2 1.5e-10 40.9 0.1 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 ORF81232 - 9.3e-05 22.1 3.1 0.00016 21.3 3.1 1.3 1 0 0 1 1 1 1 Cupin domain DUF4924 PF16271.5 ORF81232 - 0.056 13.5 0.0 0.09 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4924) HTH_Tnp_ISL3 PF13542.6 ORF81232 - 0.099 12.1 0.1 3.7 7.0 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 WD40 PF00400.32 ORF80735 - 2.8e-07 31.1 0.1 0.0014 19.4 0.0 3.1 4 0 0 4 4 4 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF80735 - 0.0028 17.9 0.0 0.0058 16.9 0.0 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF80735 - 0.12 11.3 0.1 2.6 6.9 0.0 2.1 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein ESX-1_EspG PF14011.6 ORF80735 - 0.2 11.2 2.5 1.7 8.2 0.3 2.2 1 1 0 2 2 2 0 EspG family Phage_integrase PF00589.22 ORF77766 - 2.3e-46 157.7 0.2 3.8e-46 157.0 0.0 1.4 2 0 0 2 2 2 1 Phage integrase family NPM1-C PF16276.5 ORF77766 - 0.024 14.6 0.6 0.054 13.5 0.6 1.6 1 0 0 1 1 1 0 Nucleophosmin C-terminal domain Patched PF02460.18 ORF76299 - 1.8e-23 82.6 4.2 2.1e-23 82.4 4.2 1.0 1 0 0 1 1 1 1 Patched family ACR_tran PF00873.19 ORF76299 - 1.2e-05 23.3 0.8 1.5e-05 22.9 0.8 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Yip1 PF04893.17 ORF76299 - 0.073 12.8 14.2 0.27 10.9 6.0 2.2 2 0 0 2 2 2 0 Yip1 domain SecD_SecF PF02355.16 ORF76299 - 1.7 8.0 8.8 3.5 7.0 8.8 1.4 1 1 0 1 1 1 0 Protein export membrane protein Leu_Phe_trans PF03588.14 ORF74056 - 4.1e-23 81.7 0.0 5.5e-23 81.3 0.0 1.2 1 0 0 1 1 1 1 Leucyl/phenylalanyl-tRNA protein transferase MIP PF00230.20 ORF71382 - 3.2e-14 53.2 4.4 3.4e-12 46.6 1.1 2.1 1 1 1 2 2 2 2 Major intrinsic protein DUF4440 PF14534.6 ORF71231 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF71231 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF71231 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF71231 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF71231 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF71231 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide WD40 PF00400.32 ORF7078 - 0.0028 18.5 0.0 0.041 14.8 0.0 2.5 2 0 0 2 2 2 1 WD domain, G-beta repeat Baculo_LEF-11 PF06385.12 ORF7078 - 0.09 13.3 0.9 0.24 11.9 0.3 2.0 2 0 0 2 2 2 0 Baculovirus LEF-11 protein DUF2695 PF10905.8 ORF7078 - 0.097 12.9 0.0 0.23 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2695) PBP1_TM PF14812.6 ORF68620 - 0.00043 20.6 2.2 0.00073 19.9 2.2 1.3 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Zip PF02535.22 ORF65827 - 1.7e-32 112.9 12.2 4.3e-26 91.9 2.0 2.6 1 1 1 2 2 2 2 ZIP Zinc transporter SLATT_1 PF18181.1 ORF65827 - 0.19 11.7 0.1 12 5.9 0.0 2.8 2 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 DUF4440 PF14534.6 ORF64452 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF64452 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF64452 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF64452 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF64452 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF64452 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide DUF4440 PF14534.6 ORF62176 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF62176 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF62176 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF62176 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF62176 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF62176 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Thioredoxin_15 PF18403.1 ORF61463 - 0.071 13.0 0.1 0.22 11.4 0.1 1.7 2 0 0 2 2 2 0 Thioredoxin-like domain Fe_dep_repr_C PF02742.15 ORF61463 - 0.075 13.1 0.2 0.26 11.4 0.1 1.9 2 0 0 2 2 2 0 Iron dependent repressor, metal binding and dimerisation domain Peptidase_M17 PF00883.21 ORF60415 - 4.8e-23 81.9 0.0 6.4e-23 81.5 0.0 1.2 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain PBP1_TM PF14812.6 ORF48770 - 0.00043 20.6 2.2 0.00073 19.9 2.2 1.3 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal UPF0565 PF10561.9 ORF45947 - 3.9e-19 69.0 0.1 1.6e-08 34.1 0.0 2.2 1 1 1 2 2 2 2 Uncharacterised protein family UPF0565 Fib_alpha PF08702.10 ORF40149 - 0.15 12.2 21.1 0.034 14.4 9.9 3.0 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Golgin_A5 PF09787.9 ORF40149 - 1 8.8 41.7 0.021 14.3 21.6 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 ATG16 PF08614.11 ORF40149 - 4 7.6 46.7 4 7.6 13.8 3.5 1 1 1 3 3 3 0 Autophagy protein 16 (ATG16) zf-CCCH_6 PF18585.1 ORF40149 - 5.5 7.0 9.7 0.13 12.2 0.6 3.1 3 1 0 3 3 3 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 TMPIT PF07851.13 ORF40149 - 6.5 5.9 21.3 0.32 10.2 5.5 2.6 1 1 2 3 3 3 0 TMPIT-like protein DUF4440 PF14534.6 ORF34760 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF34760 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF34760 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF34760 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF34760 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF34760 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Bro-N PF02498.17 ORF33538 - 4.3e-08 33.7 0.2 2e-07 31.6 0.0 2.1 3 0 0 3 3 3 1 BRO family, N-terminal domain DUF1981 PF09324.10 ORF32207 - 3.8e-26 90.8 5.3 2.2e-25 88.3 0.6 3.7 3 2 2 5 5 5 1 Domain of unknown function (DUF1981) Cnd1 PF12717.7 ORF32207 - 0.01 15.9 2.4 5.7 6.9 0.3 2.9 2 1 1 3 3 3 0 non-SMC mitotic condensation complex subunit 1 Elf4 PF07011.11 ORF32207 - 0.04 13.8 0.5 0.14 12.1 0.1 2.1 2 0 0 2 2 2 0 Early Flowering 4 domain Kinesin PF00225.23 ORF30250 - 6e-90 301.5 1.4 7.1e-90 301.3 1.4 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF30250 - 8.2e-06 25.8 0.0 1.7e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 Microtubule binding Kinesin_assoc PF16183.5 ORF30250 - 0.0008 19.6 3.1 0.0031 17.7 0.2 2.3 2 0 0 2 2 2 1 Kinesin-associated ABC_tran PF00005.27 ORF30050 - 7e-31 107.6 0.0 1.2e-30 106.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF30050 - 3e-05 23.6 1.4 0.00019 20.9 0.3 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF30050 - 0.00011 22.6 0.4 0.0003 21.2 0.4 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF30050 - 0.00085 19.6 0.5 0.023 14.9 0.0 2.5 2 1 0 2 2 2 1 AAA domain SbcCD_C PF13558.6 ORF30050 - 0.0011 19.1 0.9 0.023 14.9 0.7 2.6 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit DUF815 PF05673.13 ORF30050 - 0.0032 16.7 0.0 0.0053 15.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_25 PF13481.6 ORF30050 - 0.0069 16.0 0.1 0.023 14.3 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 ORF30050 - 0.0095 16.4 1.1 1.1 9.6 1.1 2.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 ORF30050 - 0.017 14.9 0.0 0.029 14.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family RsgA_GTPase PF03193.16 ORF30050 - 0.017 15.0 0.2 0.036 14.0 0.2 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 ORF30050 - 0.029 14.4 0.1 0.21 11.6 0.1 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 ORF30050 - 0.037 13.8 0.1 0.075 12.8 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 ORF30050 - 0.047 13.6 0.1 0.3 11.0 0.1 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain Zeta_toxin PF06414.12 ORF30050 - 0.074 12.3 0.1 0.17 11.2 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin MMR_HSR1 PF01926.23 ORF30050 - 0.088 12.9 0.0 0.16 12.1 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 ORF30050 - 0.091 12.5 0.0 0.21 11.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 ORF30050 - 0.093 12.5 0.0 0.2 11.4 0.0 1.6 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_14 PF13173.6 ORF30050 - 0.093 12.8 0.0 0.37 10.8 0.0 2.0 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF30050 - 0.1 13.0 0.2 0.42 11.0 0.1 2.1 2 0 0 2 2 2 0 RNA helicase ATP-synt_ab PF00006.25 ORF30050 - 0.11 12.2 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_21 PF13304.6 ORF30050 - 0.11 12.3 0.2 0.32 10.8 0.2 1.8 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 ORF30050 - 0.15 12.6 0.5 0.29 11.7 0.5 1.9 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF30050 - 0.16 11.5 0.0 0.28 10.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region NACHT PF05729.12 ORF30050 - 0.21 11.5 1.3 0.83 9.6 0.0 2.3 3 0 0 3 3 3 0 NACHT domain MGC-24 PF05283.11 ORF29951 - 3.1e-08 34.2 1.0 3.1e-08 34.2 1.0 1.9 2 0 0 2 2 2 1 Multi-glycosylated core protein 24 (MGC-24), sialomucin Amnionless PF14828.6 ORF29951 - 0.029 13.2 0.0 0.043 12.6 0.0 1.3 1 0 0 1 1 1 0 Amnionless Mucin PF01456.17 ORF29951 - 0.029 14.3 15.7 0.061 13.3 15.7 1.5 1 0 0 1 1 1 0 Mucin-like glycoprotein TMEM154 PF15102.6 ORF29951 - 0.054 13.4 4.5 0.17 11.8 4.5 1.7 1 1 0 1 1 1 0 TMEM154 protein family DUF5305 PF17231.2 ORF29951 - 0.058 12.8 0.1 0.08 12.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) EphA2_TM PF14575.6 ORF29951 - 0.074 13.9 0.4 3.5 8.6 0.0 2.4 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Glycoprotein PF03409.15 ORF29951 - 0.1 11.5 5.1 0.14 11.0 5.1 1.1 1 0 0 1 1 1 0 Transmembrane glycoprotein Insulin_TMD PF17870.1 ORF29951 - 0.33 11.1 1.7 3.8 7.7 0.1 2.3 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Sporozoite_P67 PF05642.11 ORF29951 - 1.7 6.6 5.3 2 6.4 5.3 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Med3 PF11593.8 ORF29951 - 3.4 6.7 11.2 5 6.2 11.2 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DivIC PF04977.15 ORF28997 - 0.015 15.1 5.7 0.015 15.1 5.7 4.6 3 2 1 4 4 4 0 Septum formation initiator FtsA PF14450.6 ORF28003 - 9.6e-10 38.8 0.3 2.1e-09 37.7 0.0 1.6 2 0 0 2 2 2 1 Cell division protein FtsA MreB_Mbl PF06723.13 ORF28003 - 1.8e-07 30.3 0.0 3.4e-05 22.8 0.0 2.7 2 1 1 3 3 3 2 MreB/Mbl protein PilM_2 PF11104.8 ORF28003 - 3.1e-05 23.2 0.0 6e-05 22.2 0.0 1.4 1 1 0 1 1 1 1 Type IV pilus assembly protein PilM; EutA PF06277.11 ORF28003 - 0.00048 19.1 0.1 0.00073 18.5 0.1 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutA HSP70 PF00012.20 ORF28003 - 0.0026 16.0 0.7 0.0049 15.1 0.7 1.4 1 0 0 1 1 1 1 Hsp70 protein Ppx-GppA PF02541.16 ORF28003 - 0.11 11.9 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Ppx/GppA phosphatase family DDR PF08841.10 ORF28003 - 0.3 10.0 1.8 0.26 10.3 0.3 1.6 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain MMR_HSR1 PF01926.23 ORF27692 - 7.2e-16 58.3 0.0 1.2e-15 57.5 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF27692 - 2.6e-06 27.0 0.0 4e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF27692 - 0.00021 21.4 0.6 0.053 13.6 0.2 2.8 2 1 1 3 3 3 2 Dynamin family RsgA_GTPase PF03193.16 ORF27692 - 0.0053 16.7 0.1 0.0093 15.9 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AIG1 PF04548.16 ORF27692 - 0.16 11.3 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 AIG1 family ubiquitin PF00240.23 ORF2745 - 0.22 11.3 0.0 0.38 10.5 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family CDC50 PF03381.15 ORF26997 - 1.4e-33 116.6 0.3 1.8e-33 116.3 0.3 1.0 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF3533 PF12051.8 ORF26717 - 9 5.1 5.2 11 4.8 4.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3533) ubiquitin PF00240.23 ORF25138 - 1.1e-19 69.9 0.1 3e-19 68.5 0.1 1.7 1 1 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF25138 - 1.1e-08 34.8 0.0 2.1e-08 33.9 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like TBK1_ULD PF18396.1 ORF25138 - 0.023 14.6 0.0 0.044 13.7 0.0 1.5 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_2 PF14560.6 ORF25138 - 0.06 13.8 0.0 0.14 12.6 0.0 1.6 1 0 0 1 1 1 0 Ubiquitin-like domain ADH_zinc_N PF00107.26 ORF24982 - 2.6e-26 92.1 0.0 4.1e-26 91.5 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF4440 PF14534.6 ORF23395 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF23395 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF23395 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF23395 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF23395 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF23395 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Kinesin PF00225.23 ORF20530 - 6e-90 301.5 1.4 7.1e-90 301.3 1.4 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF20530 - 8.2e-06 25.8 0.0 1.7e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 Microtubule binding Kinesin_assoc PF16183.5 ORF20530 - 0.0008 19.6 3.1 0.0031 17.7 0.2 2.3 2 0 0 2 2 2 1 Kinesin-associated DUF4440 PF14534.6 ORF15971 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF15971 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF15971 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF15971 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF15971 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF15971 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide PhyH PF05721.13 ORF15164 - 0.0054 17.0 0.3 0.0083 16.4 0.3 1.3 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) UBX PF00789.20 ORF14361 - 2.2e-08 34.2 0.0 3.2e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 UBX domain ABC_tran PF00005.27 ORF13378 - 3.7e-32 111.7 0.4 8.3e-32 110.6 0.0 1.8 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF13378 - 3.5e-05 23.4 1.7 0.00038 20.0 1.7 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF13378 - 0.00015 22.2 0.3 0.00037 20.9 0.3 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF13378 - 0.00092 19.5 0.4 0.016 15.4 0.4 2.3 1 1 0 1 1 1 1 AAA domain DUF815 PF05673.13 ORF13378 - 0.0012 18.0 0.0 0.0026 17.0 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF815) SbcCD_C PF13558.6 ORF13378 - 0.0025 18.0 1.0 0.054 13.7 0.6 2.8 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA PF00004.29 ORF13378 - 0.012 16.1 0.3 2.4 8.6 0.0 2.5 1 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 ORF13378 - 0.015 15.2 0.2 0.031 14.2 0.2 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_25 PF13481.6 ORF13378 - 0.016 14.8 0.1 0.041 13.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF13378 - 0.026 14.5 0.1 0.25 11.3 0.1 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) PRK PF00485.18 ORF13378 - 0.026 14.3 0.0 0.041 13.6 0.0 1.4 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_29 PF13555.6 ORF13378 - 0.027 14.2 0.1 0.054 13.2 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_21 PF13304.6 ORF13378 - 0.069 12.9 0.2 0.16 11.8 0.2 1.6 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Rad17 PF03215.15 ORF13378 - 0.071 13.0 0.1 0.25 11.2 0.1 1.8 2 0 0 2 2 2 0 Rad17 P-loop domain ATP-synt_ab PF00006.25 ORF13378 - 0.072 12.7 0.0 0.079 12.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain NTPase_1 PF03266.15 ORF13378 - 0.077 12.9 0.0 0.32 10.9 0.0 2.0 2 0 0 2 2 2 0 NTPase MMR_HSR1 PF01926.23 ORF13378 - 0.087 12.9 0.1 0.16 12.0 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 ORF13378 - 0.09 12.0 0.6 0.2 10.9 0.2 1.7 2 0 0 2 2 2 0 Zeta toxin Viral_helicase1 PF01443.18 ORF13378 - 0.1 12.3 0.1 0.26 11.0 0.1 1.6 2 0 0 2 2 1 0 Viral (Superfamily 1) RNA helicase G-alpha PF00503.20 ORF13378 - 0.1 11.7 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_18 PF13238.6 ORF13378 - 0.13 12.8 0.4 0.44 11.1 0.3 1.9 1 1 0 2 2 2 0 AAA domain AAA_24 PF13479.6 ORF13378 - 0.13 11.9 0.0 0.25 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF13378 - 0.14 12.6 0.1 0.46 10.9 0.1 1.9 2 0 0 2 2 1 0 RNA helicase AAA_7 PF12775.7 ORF13378 - 0.15 11.6 0.0 0.34 10.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region Misat_Tub_SegII PF10644.9 ORF12558 - 7.2e-15 55.3 4.3 1.7e-14 54.2 0.2 2.3 2 0 0 2 2 2 1 Misato Segment II tubulin-like domain Tubulin PF00091.25 ORF12558 - 7.3e-05 23.0 2.9 0.0042 17.3 0.1 3.1 2 1 1 3 3 3 1 Tubulin/FtsZ family, GTPase domain NuA4 PF09340.10 ORF12558 - 1 9.2 5.1 0.45 10.4 1.6 2.2 2 0 0 2 2 2 0 Histone acetyltransferase subunit NuA4 RTC PF01137.21 ORF12328 - 1.4e-24 86.6 0.0 1.7e-24 86.3 0.0 1.1 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 ORF12328 - 1.2e-08 35.4 1.0 3.1e-08 34.0 1.0 1.7 1 1 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain DUF4440 PF14534.6 ORF108523 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF108523 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF108523 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF108523 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF108523 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF108523 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide FAP206 PF12018.8 ORF106423 - 2.2 7.7 12.9 0.18 11.3 5.5 2.2 1 1 1 2 2 2 0 Domain of unknown function CnrY PF17524.2 ORF104799 - 0.02 15.1 0.2 0.074 13.3 0.2 2.0 1 0 0 1 1 1 0 Anti-sigma factor CnrY Helicase_C PF00271.31 ORF103189 - 2.7e-27 95.3 0.0 4.6e-27 94.6 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF103189 - 6e-05 22.9 0.0 0.0025 17.6 0.0 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase WD40 PF00400.32 ORF101088 - 2.8e-07 31.1 0.1 0.0014 19.4 0.0 3.1 4 0 0 4 4 4 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF101088 - 0.0028 17.9 0.0 0.0058 16.9 0.0 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF101088 - 0.12 11.3 0.1 2.6 6.9 0.0 2.1 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein ESX-1_EspG PF14011.6 ORF101088 - 0.2 11.2 2.5 1.7 8.2 0.3 2.2 1 1 0 2 2 2 0 EspG family Tim17 PF02466.19 NODE_25428_length_829_cov_95.709068_g19843_i0forward_frame_1 - 2.6e-05 24.5 0.5 4.9e-05 23.7 0.5 1.5 1 1 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family IFP_35_N PF07334.13 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.0021 18.1 0.5 0.0021 18.1 0.5 3.7 3 1 0 3 3 3 1 Interferon-induced 35 kDa protein (IFP 35) N-terminus Wtap PF17098.5 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.015 15.2 19.1 0.046 13.6 18.9 1.8 1 1 0 1 1 1 0 WTAP/Mum2p family GAS PF13851.6 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.085 12.2 30.7 0.14 11.5 21.9 2.3 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding APG6_N PF17675.1 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.12 12.9 0.1 0.12 12.9 0.1 3.1 2 1 0 2 2 1 0 Apg6 coiled-coil region HPIH PF13323.6 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.13 12.1 1.5 0.22 11.4 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain with HPIH motif ADIP PF11559.8 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 1.6 8.8 28.9 0.052 13.6 9.7 2.7 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding JAKMIP_CC3 PF16034.5 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 2.4 8.1 25.4 0.032 14.2 10.1 2.4 1 1 1 2 2 1 0 JAKMIP CC3 domain PI_PP_I PF18363.1 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 2.5 8.3 10.0 0.2 11.8 2.2 2.7 2 1 1 3 3 3 0 Phosphoinositide phosphatase insertion domain TMF_DNA_bd PF12329.8 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 3.5 7.7 28.5 0.56 10.2 2.3 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding XLF PF09302.11 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 4.6 7.4 13.7 0.37 11.0 2.1 2.8 2 1 1 3 3 3 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Prefoldin_3 PF13758.6 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 6.6 6.8 13.0 0.24 11.5 1.4 3.1 2 1 1 3 3 3 0 Prefoldin subunit OmpH PF03938.14 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 8.3 6.7 30.8 7.4 6.9 10.7 2.6 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) PRD PF00874.20 NODE_25298_length_832_cov_25.941029_g19732_i0forward_frame_2 - 0.0053 17.0 2.0 0.0066 16.7 0.6 1.9 2 0 0 2 2 2 1 PRD domain RCC1_2 PF13540.6 NODE_25287_length_832_cov_101.437892_g19721_i0reverse_frame_2 - 7.1e-20 70.3 20.2 0.0094 15.7 1.3 7.3 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 NODE_25287_length_832_cov_101.437892_g19721_i0reverse_frame_2 - 0.0015 18.8 0.8 7.2 7.0 0.0 4.1 3 1 1 4 4 4 2 TFIIH p62 subunit, N-terminal domain SIS_2 PF13580.6 NODE_25287_length_832_cov_101.437892_g19721_i0reverse_frame_2 - 0.0092 16.0 13.6 1.8 8.6 1.1 4.6 1 1 4 5 5 5 3 SIS domain EFP_N PF08207.12 NODE_25287_length_832_cov_101.437892_g19721_i0reverse_frame_2 - 0.025 14.6 0.0 14 5.8 0.0 3.5 4 0 0 4 4 4 0 Elongation factor P (EF-P) KOW-like domain Mitofilin PF09731.9 NODE_25287_length_832_cov_101.437892_g19721_i0reverse_frame_2 - 0.088 11.6 2.2 2.4 6.9 0.4 2.1 2 0 0 2 2 2 0 Mitochondrial inner membrane protein DUF1054 PF06335.12 NODE_25280_length_832_cov_180.692597_g16397_i3reverse_frame_2 - 0.096 12.6 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) MARCKS PF02063.17 NODE_25277_length_832_cov_208.286073_g19712_i0forward_frame_3 - 1.6 8.7 10.7 2.4 8.1 10.7 1.2 1 0 0 1 1 1 0 MARCKS family CC2D2AN-C2 PF15625.6 NODE_25209_length_834_cov_164.396746_g19659_i0reverse_frame_3 - 0.024 14.4 0.1 0.035 13.8 0.1 1.2 1 0 0 1 1 1 0 CC2D2A N-terminal C2 domain Pkinase PF00069.25 NODE_25192_length_834_cov_3304.541927_g19647_i0forward_frame_2 - 1.9e-36 125.8 0.2 3e-36 125.1 0.2 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_25192_length_834_cov_3304.541927_g19647_i0forward_frame_2 - 4.8e-25 88.3 0.1 6e-25 88.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_25192_length_834_cov_3304.541927_g19647_i0forward_frame_2 - 0.0021 17.1 0.3 0.0027 16.7 0.3 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 NODE_25192_length_834_cov_3304.541927_g19647_i0forward_frame_2 - 0.015 14.6 0.0 0.021 14.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_25192_length_834_cov_3304.541927_g19647_i0forward_frame_2 - 0.03 13.6 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 Kinase-like PSI_PsaF PF02507.15 ORF9397 - 3.7e-41 140.8 0.1 5.7e-41 140.2 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF9397 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein tRNA_U5-meth_tr PF05958.11 ORF90324 - 2.5e-49 168.2 0.0 2.4e-47 161.6 0.0 2.1 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_15 PF09445.10 ORF90324 - 3.2e-07 30.1 0.0 4.7e-07 29.5 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltr_RsmB-F PF01189.17 ORF90324 - 7.3e-05 22.5 0.1 0.00011 21.9 0.1 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F MTS PF05175.14 ORF90324 - 8.3e-05 22.2 0.0 0.00012 21.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 ORF90324 - 0.00024 21.7 0.0 0.00092 19.9 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF90324 - 0.013 15.3 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 ORF90324 - 0.05 13.0 0.2 0.071 12.5 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.6 ORF90324 - 0.05 13.4 0.0 0.083 12.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF90324 - 0.053 14.2 0.0 0.1 13.3 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 ORF90324 - 0.06 13.1 0.0 0.099 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 ORF90324 - 0.091 11.8 0.0 0.14 11.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DREV PF05219.12 ORF90324 - 0.17 11.0 0.0 0.29 10.2 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase DUF3021 PF11457.8 ORF88299 - 0.019 15.3 6.9 0.029 14.7 6.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF2776 PF10951.8 ORF88299 - 0.05 12.9 4.6 0.07 12.4 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) EOS1 PF12326.8 ORF88299 - 0.13 12.2 0.5 0.25 11.3 0.5 1.6 1 1 0 1 1 1 0 N-glycosylation protein TMEM208_SND2 PF05620.11 ORF88299 - 0.21 11.4 4.6 0.48 10.2 4.6 1.8 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 HA2 PF04408.23 ORF88299 - 0.41 11.0 2.5 1.1 9.6 2.5 1.8 1 1 0 1 1 1 0 Helicase associated domain (HA2) DUF3086 PF11285.8 ORF88299 - 0.42 9.7 4.6 0.51 9.4 3.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3086) IU_nuc_hydro PF01156.19 ORF86618 - 6.1e-11 42.4 0.2 4.4e-10 39.6 0.0 1.9 1 1 0 2 2 2 1 Inosine-uridine preferring nucleoside hydrolase SET PF00856.28 ORF85746 - 0.0031 17.9 0.0 0.0061 17.0 0.0 1.5 1 0 0 1 1 1 1 SET domain Rubis-subs-bind PF09273.11 ORF85746 - 0.019 15.6 0.4 0.043 14.5 0.0 1.8 2 0 0 2 2 2 0 Rubisco LSMT substrate-binding ZapA PF05164.13 ORF85746 - 0.077 13.4 0.2 17 5.9 0.0 2.9 3 0 0 3 3 3 0 Cell division protein ZapA EF-hand_7 PF13499.6 ORF84225 - 1.8e-05 25.1 0.1 0.01 16.2 0.0 1.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF84225 - 0.0035 17.1 0.0 0.0074 16.1 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF84225 - 0.0046 16.8 0.0 0.03 14.2 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF84225 - 0.0072 15.8 0.0 0.016 14.7 0.0 1.6 1 0 0 1 1 1 1 EF hand SPARC_Ca_bdg PF10591.9 ORF84225 - 0.08 13.3 0.0 0.16 12.3 0.0 1.5 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF84225 - 0.17 11.8 0.0 0.35 10.8 0.0 1.4 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF842 - 0.0011 18.7 0.1 0.0068 16.3 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF842 - 0.022 14.3 0.0 0.054 13.1 0.0 1.7 1 0 0 1 1 1 0 EF hand EF-hand_7 PF13499.6 ORF842 - 0.026 15.0 0.0 0.048 14.1 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF842 - 0.073 12.6 0.0 0.22 11.1 0.0 1.8 1 0 0 1 1 1 0 EF hand PhyH PF05721.13 ORF81808 - 1.9e-44 152.4 0.0 2.6e-44 152.0 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) DUF4672 PF15716.5 ORF79351 - 0.049 13.3 0.4 0.073 12.7 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) PSI_PsaF PF02507.15 ORF77027 - 3.7e-41 140.8 0.1 5.7e-41 140.2 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF77027 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein PUF PF00806.19 ORF7495 - 1.8e-30 102.9 0.2 3.7e-07 29.5 0.1 5.2 5 0 0 5 5 5 5 Pumilio-family RNA binding repeat Mac PF12464.8 ORF7495 - 0.049 13.9 2.5 2.5 8.4 0.1 2.6 2 0 0 2 2 2 0 Maltose acetyltransferase DHHC PF01529.20 ORF74271 - 1.2e-29 103.1 0.5 1.2e-29 103.1 0.5 2.3 2 0 0 2 2 2 1 DHHC palmitoyltransferase Spt4 PF06093.13 ORF74271 - 0.64 10.2 4.8 1.4 9.1 4.8 1.5 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger DZR PF12773.7 ORF74271 - 8.9 6.4 10.8 7.2 6.7 7.3 2.1 2 0 0 2 2 2 0 Double zinc ribbon EamA PF00892.20 ORF73493 - 4.7e-16 59.2 25.4 4.7e-16 59.2 16.2 2.1 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 ORF73493 - 0.00015 21.2 10.5 0.0002 20.8 10.5 1.3 1 0 0 1 1 1 1 Triose-phosphate Transporter family Amino_oxidase PF01593.24 ORF68009 - 1.3e-41 143.3 0.2 1.5e-41 143.2 0.2 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Ribosomal_L5e PF17144.4 ORF65369 - 3.4e-62 209.3 0.0 6.3e-62 208.4 0.0 1.5 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 ORF65369 - 1.4e-29 102.9 9.6 2.9e-29 101.9 9.6 1.6 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Sorting_nexin PF03700.13 ORF65369 - 0.056 14.0 2.7 0.1 13.1 2.7 1.5 1 0 0 1 1 1 0 Sorting nexin, N-terminal domain TPR_12 PF13424.6 ORF58185 - 2.4e-63 210.4 43.4 1.6e-15 57.1 1.4 4.6 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_10 PF13374.6 ORF58185 - 4.2e-46 153.6 20.4 6.5e-10 38.6 0.3 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_7 PF13176.6 ORF58185 - 1.1e-14 53.2 17.6 0.0038 17.2 0.2 6.3 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 ORF58185 - 2.9e-14 53.4 14.4 7e-06 26.6 0.5 5.5 4 2 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF58185 - 3.3e-14 51.8 12.5 0.052 13.7 0.3 6.4 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF58185 - 1.5e-12 47.5 18.7 3.8e-06 26.5 0.7 2.3 1 1 2 3 3 3 3 MalT-like TPR region TPR_1 PF00515.28 ORF58185 - 8.3e-11 41.2 6.1 0.43 10.5 0.0 6.0 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF58185 - 1.4e-10 41.1 17.0 0.059 14.2 0.4 6.5 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF58185 - 4.2e-10 39.0 12.2 0.065 13.5 0.1 6.2 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_3 PF07720.12 ORF58185 - 5.1e-07 29.6 0.0 3.9 7.6 0.0 5.1 5 0 0 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF58185 - 1e-06 28.9 2.5 0.31 11.3 0.1 4.0 2 1 0 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 ORF58185 - 2.7e-06 27.3 1.1 5.5 7.6 0.0 6.2 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF58185 - 2.8e-06 27.7 14.2 0.058 13.9 0.8 4.7 3 2 0 3 3 3 2 Tetratricopeptide repeat RPN6_N PF18055.1 ORF58185 - 8.9e-06 26.1 8.1 0.17 12.3 0.0 3.3 3 0 0 3 3 3 3 26S proteasome regulatory subunit RPN6 N-terminal domain PPR PF01535.20 ORF58185 - 0.0001 22.3 8.0 2.2 8.7 0.1 5.7 6 0 0 6 6 5 1 PPR repeat TPR_5 PF12688.7 ORF58185 - 0.00038 20.7 13.0 0.013 15.8 0.4 3.9 1 1 3 4 4 4 2 Tetratrico peptide repeat TPR_4 PF07721.14 ORF58185 - 0.0027 18.2 21.2 2.3 9.1 0.0 7.1 8 0 0 8 8 6 1 Tetratricopeptide repeat Phostensin_N PF13916.6 ORF58185 - 0.011 16.1 2.3 8 6.9 0.1 3.7 2 1 0 3 3 3 0 PP1-regulatory protein, Phostensin N-terminal HU-CCDC81_bac_2 PF18175.1 ORF58185 - 0.02 14.8 0.9 0.66 9.9 0.1 2.8 2 0 0 2 2 2 0 CCDC81-like prokaryotic HU domain 2 TssO PF17561.2 ORF58185 - 0.023 14.8 0.1 0.52 10.4 0.0 2.4 2 0 0 2 2 2 0 Type VI secretion system, TssO ComR_TPR PF18710.1 ORF58185 - 0.049 13.2 0.2 0.18 11.3 0.0 2.0 3 0 0 3 3 3 0 ComR tetratricopeptide LppA PF16708.5 ORF58185 - 0.052 13.5 6.1 1.3 8.9 0.1 3.4 3 1 0 3 3 3 0 Lipoprotein confined to pathogenic Mycobacterium Coatomer_E PF04733.14 ORF58185 - 0.067 12.6 12.8 0.47 9.8 0.6 4.5 2 1 3 5 5 5 0 Coatomer epsilon subunit TPR_6 PF13174.6 ORF58185 - 0.12 13.0 12.0 56 4.7 0.2 6.2 6 0 0 6 6 6 0 Tetratricopeptide repeat PPR_2 PF13041.6 ORF58185 - 0.13 12.4 3.8 35 4.7 0.1 4.3 5 0 0 5 5 5 0 PPR repeat family TPR_11 PF13414.6 ORF58185 - 0.17 11.6 5.8 7.9 6.3 0.1 4.6 5 0 0 5 5 5 0 TPR repeat Nterm_IS4 PF13006.7 ORF58185 - 0.39 10.9 2.1 10 6.4 1.6 3.0 1 1 1 2 2 2 0 Insertion element 4 transposase N-terminal Lectin_N PF03954.14 ORF58185 - 1.1 9.0 5.9 0.62 9.8 1.2 2.5 2 1 0 3 3 3 0 Hepatic lectin, N-terminal domain Mit_KHE1 PF10173.9 ORF58185 - 1.6 8.8 4.1 12 5.9 0.1 2.9 1 1 1 2 2 2 0 Mitochondrial K+-H+ exchange-related Peripla_BP_2 PF01497.18 ORF58185 - 2.2 7.8 4.5 7.5 6.0 0.2 2.7 2 1 0 3 3 3 0 Periplasmic binding protein FliT PF05400.13 ORF58185 - 2.3 9.1 23.4 0.072 13.9 1.7 3.9 4 1 0 4 4 4 0 Flagellar protein FliT L27_2 PF09045.10 ORF58185 - 4.5 7.3 8.1 1.4 8.9 0.6 3.0 4 0 0 4 4 2 0 L27_2 NiFeSe_Hases PF00374.19 ORF54693 - 4.6e-101 339.2 0.0 5.1e-101 339.1 0.0 1.0 1 0 0 1 1 1 1 Nickel-dependent hydrogenase TMF_TATA_bd PF12325.8 ORF54483 - 0.098 12.9 11.9 0.2 11.9 11.9 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding YabA PF06156.13 ORF54483 - 0.11 13.2 7.6 0.18 12.4 7.6 1.4 1 0 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF54483 - 0.15 9.9 4.4 0.18 9.7 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family JIP_LZII PF16471.5 ORF54483 - 0.26 11.5 7.5 0.28 11.4 6.0 1.8 1 1 0 1 1 1 0 JNK-interacting protein leucine zipper II SOGA PF11365.8 ORF54483 - 0.47 11.6 13.8 2.1 9.5 13.8 1.9 1 1 0 1 1 1 0 Protein SOGA APG6_N PF17675.1 ORF54483 - 2.2 8.8 20.7 1.3 9.6 18.6 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF54483 - 6 7.4 19.9 19 5.8 18.4 2.3 1 1 1 2 2 2 0 Cell division protein ZapB PAE PF03283.13 ORF53105 - 1.2e-45 156.2 0.8 6.4e-44 150.5 0.8 2.3 1 1 0 1 1 1 1 Pectinacetylesterase PSI_PsaF PF02507.15 ORF52273 - 3.7e-41 140.8 0.1 5.7e-41 140.2 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF52273 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein SpoIIE PF07228.12 ORF5077 - 1.8e-13 50.9 0.0 2.4e-13 50.4 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) PP2C PF00481.21 ORF5077 - 4.4e-10 39.6 0.0 6.9e-07 29.2 0.0 2.2 2 0 0 2 2 2 2 Protein phosphatase 2C DUF4672 PF15716.5 ORF48652 - 0.049 13.3 0.4 0.073 12.7 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) Dala_Dala_lig_N PF01820.21 ORF47529 - 0.045 14.2 0.2 0.19 12.2 0.0 2.0 1 1 1 2 2 2 0 D-ala D-ala ligase N-terminus Mic1 PF07035.12 ORF4690 - 1.1e-18 67.5 0.8 4.9e-12 45.8 0.2 2.1 2 0 0 2 2 2 2 Colon cancer-associated protein Mic1-like PSI_PsaF PF02507.15 ORF46778 - 3.7e-41 140.8 0.1 5.7e-41 140.2 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF46778 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein PUF PF00806.19 ORF45885 - 1.8e-30 102.9 0.2 3.7e-07 29.5 0.1 5.2 5 0 0 5 5 5 5 Pumilio-family RNA binding repeat Mac PF12464.8 ORF45885 - 0.049 13.9 2.5 2.5 8.4 0.1 2.6 2 0 0 2 2 2 0 Maltose acetyltransferase Sugar_tr PF00083.24 ORF44775 - 6.8e-08 31.8 5.7 6.8e-08 31.8 5.7 1.7 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF44775 - 2.3e-07 30.1 1.2 3.1e-07 29.7 1.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF2615 PF11027.8 ORF44775 - 0.081 13.1 0.5 17 5.6 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2615) IL15 PF02372.15 ORF44173 - 0.11 12.5 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Interleukin 15 PSI_PsaF PF02507.15 ORF44019 - 3.7e-41 140.8 0.1 5.7e-41 140.2 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF44019 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein DUF2306 PF10067.9 ORF42719 - 0.0049 17.1 0.4 0.62 10.3 0.1 2.2 2 0 0 2 2 2 2 Predicted membrane protein (DUF2306) DUF2300 PF10062.9 ORF40218 - 0.0027 17.8 1.7 0.005 16.9 0.1 2.0 2 0 0 2 2 2 1 Predicted secreted protein (DUF2300) PSI_PsaF PF02507.15 ORF39183 - 3.7e-41 140.8 0.1 5.7e-41 140.2 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF39183 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein Amidase PF01425.21 ORF37336 - 1.6e-07 30.6 0.0 2.6e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Amidase Glyco_transf_34 PF05637.12 ORF36730 - 8.9e-18 64.9 0.7 5.3e-08 32.9 0.0 2.9 2 2 0 2 2 2 2 galactosyl transferase GMA12/MNN10 family Nucleotid_trans PF03407.16 ORF36730 - 4.5e-05 23.5 0.3 8.7e-05 22.6 0.0 1.5 2 0 0 2 2 2 1 Nucleotide-diphospho-sugar transferase Glyco_tranf_2_4 PF13704.6 ORF36730 - 0.063 13.8 0.3 0.14 12.6 0.3 1.7 1 1 0 1 1 1 0 Glycosyl transferase family 2 DUF273 PF03314.14 ORF36730 - 0.16 11.5 0.1 2 7.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function, DUF273 Methyltransf_31 PF13847.6 ORF35931 - 7.6e-13 48.5 0.0 9.4e-13 48.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF35931 - 4.5e-10 40.1 0.0 8.4e-10 39.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF35931 - 3.1e-08 34.3 0.0 5.1e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF35931 - 4.3e-08 33.7 0.0 7.5e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF35931 - 3.7e-07 29.7 0.0 8.4e-07 28.6 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family ADH_zinc_N PF00107.26 ORF35931 - 0.011 15.7 0.0 0.031 14.3 0.0 1.7 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DUF43 PF01861.16 ORF35931 - 0.055 12.7 0.0 0.069 12.4 0.0 1.2 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain TPMT PF05724.11 ORF35931 - 0.14 11.8 0.0 0.24 11.0 0.0 1.4 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) UPF0449 PF15136.6 ORF35791 - 0.23 12.0 5.3 0.39 11.2 0.0 2.9 2 1 0 2 2 2 0 Uncharacterised protein family UPF0449 Hydrolase_6 PF13344.6 ORF35435 - 5.6e-19 68.1 0.0 3.8e-18 65.4 0.0 2.1 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF35435 - 7.2e-19 67.6 0.0 1e-17 63.9 0.0 2.2 2 0 0 2 2 2 1 HAD-hyrolase-like HAD_2 PF13419.6 ORF35435 - 1.3e-07 31.9 0.0 3.6e-05 23.9 0.0 2.3 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF35435 - 2.6e-07 31.1 0.0 0.00077 19.8 0.0 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 ORF35435 - 0.00029 20.5 0.0 0.0009 18.9 0.0 1.7 2 0 0 2 2 2 1 Mitochondrial PGP phosphatase EF-hand_6 PF13405.6 ORF33974 - 1.3e-09 37.2 0.2 5.6e-05 22.7 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF33974 - 1.5e-09 36.7 0.1 0.0009 18.6 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF33974 - 3.1e-09 37.2 1.4 1.7e-07 31.6 0.2 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF33974 - 1.1e-06 28.4 0.2 0.072 12.9 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain pair Ion_trans PF00520.31 ORF33974 - 7.2e-06 25.4 4.7 9.5e-06 25.0 4.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_5 PF13202.6 ORF33974 - 7.7e-05 22.0 1.1 0.0019 17.6 0.1 2.6 2 0 0 2 2 2 1 EF hand Med30 PF11315.8 ORF33974 - 0.024 14.8 1.4 3.9 7.7 0.4 2.2 2 0 0 2 2 2 0 Mediator complex subunit 30 Abi_C PF14355.6 ORF33974 - 0.039 14.1 0.0 0.44 10.7 0.0 2.5 2 0 0 2 2 2 0 Abortive infection C-terminus Nse4-Nse3_bdg PF15412.6 ORF33974 - 0.046 13.8 0.1 0.14 12.3 0.1 1.9 1 1 1 2 2 2 0 Binding domain of Nse4/EID3 to Nse3-MAGE IER PF05760.12 ORF33859 - 2.8 8.1 7.0 4 7.7 7.0 1.1 1 0 0 1 1 1 0 Immediate early response protein (IER) HTH_48 PF17906.1 ORF29876 - 0.036 14.2 0.1 0.085 13.0 0.1 1.6 1 0 0 1 1 1 0 HTH domain in Mos1 transposase APC_N_CC PF16689.5 ORF27515 - 0.052 13.6 2.6 0.51 10.5 0.4 3.0 2 0 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain Seryl_tRNA_N PF02403.22 ORF27515 - 0.4 10.9 21.3 0.035 14.3 3.1 3.7 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain GAS PF13851.6 ORF27515 - 1.3 8.4 26.1 0.75 9.1 0.2 3.5 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding Golgin_A5 PF09787.9 ORF27515 - 6.7 6.1 29.4 0.67 9.4 11.0 3.1 1 1 2 3 3 3 0 Golgin subfamily A member 5 TMF_TATA_bd PF12325.8 ORF27515 - 7.1 6.9 23.0 1.5 9.0 8.2 4.2 1 1 3 4 4 4 0 TATA element modulatory factor 1 TATA binding RabGAP-TBC PF00566.18 ORF17940 - 2.2e-23 83.0 2.3 3.2e-23 82.5 2.3 1.3 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Rx_N PF18052.1 ORF14111 - 0.2 12.0 3.7 0.83 10.0 3.8 1.9 1 1 0 1 1 1 0 Rx N-terminal domain HSCB_C PF07743.13 ORF14111 - 0.27 11.7 4.1 3.3 8.3 4.1 2.4 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain MORN PF02493.20 ORF1381 - 9.6e-05 22.1 0.1 9.6e-05 22.1 0.1 2.5 4 0 0 4 4 4 1 MORN repeat DUF4816 PF16086.5 ORF1381 - 0.056 13.4 1.8 0.056 13.4 1.8 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF4816) YtxH PF12732.7 ORF1381 - 0.33 11.5 4.0 9.2 6.9 4.0 2.5 1 1 0 1 1 1 0 YtxH-like protein Spore_III_AF PF09581.10 ORF1381 - 4.2 7.3 17.4 9.2 6.3 17.4 1.5 1 1 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) WW PF00397.26 ORF13552 - 3.3e-06 27.1 1.2 0.00067 19.7 0.8 2.3 2 0 0 2 2 2 2 WW domain IQ PF00612.27 ORF11981 - 0.00027 20.5 15.0 0.26 11.2 5.0 3.7 3 0 0 3 3 3 3 IQ calmodulin-binding motif HAUS-augmin3 PF14932.6 ORF111319 - 0.078 12.6 29.0 0.13 11.8 21.7 2.5 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Fib_alpha PF08702.10 ORF111319 - 0.18 12.0 13.9 1.1 9.5 1.1 3.2 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 ORF111319 - 0.3 9.9 31.5 1.4 7.7 20.7 2.6 1 1 2 3 3 3 0 Spc7 kinetochore protein Filament PF00038.21 ORF111319 - 0.66 9.5 31.6 1.4 8.5 19.6 2.4 1 1 1 2 2 2 0 Intermediate filament protein AAA_13 PF13166.6 ORF111319 - 1.3 7.5 20.5 1.9 7.0 20.5 1.2 1 0 0 1 1 1 0 AAA domain Rx_N PF18052.1 ORF111319 - 7.9 6.8 14.8 1 9.7 1.0 3.4 1 1 0 3 3 3 0 Rx N-terminal domain GTP_cyclohydroI PF01227.22 ORF109812 - 0.11 11.9 0.5 0.17 11.3 0.5 1.2 1 0 0 1 1 1 0 GTP cyclohydrolase I Fe_hyd_SSU PF02256.17 ORF109657 - 0.00039 20.4 2.3 0.13 12.4 0.1 3.0 3 0 0 3 3 3 2 Iron hydrogenase small subunit PSI_PsaF PF02507.15 ORF109382 - 3.7e-41 140.8 0.1 5.7e-41 140.2 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF109382 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein Tho2 PF11262.8 ORF106827 - 0.0014 17.8 18.4 0.0083 15.4 0.6 2.8 2 1 1 3 3 3 2 Transcription factor/nuclear export subunit protein 2 DUF4570 PF15134.6 ORF106827 - 0.0047 16.9 9.2 0.0047 16.9 9.2 2.8 2 1 0 3 3 3 1 Domain of unknown function (DUF4570) DUF4407 PF14362.6 ORF106827 - 0.0075 15.7 3.4 0.0075 15.7 3.4 2.4 2 1 0 2 2 2 1 Domain of unknown function (DUF4407) HOOK PF05622.12 ORF106827 - 0.009 14.2 29.4 0.011 13.9 29.4 1.0 1 0 0 1 1 1 1 HOOK protein Csm1_N PF18504.1 ORF106827 - 0.064 13.6 0.4 0.064 13.6 0.4 5.4 3 2 3 6 6 6 0 Csm1 N-terminal domain DUF1664 PF07889.12 ORF106827 - 0.074 13.1 17.7 0.039 14.0 4.2 3.5 3 1 1 4 4 4 0 Protein of unknown function (DUF1664) Thioredoxin_5 PF13743.6 ORF106827 - 0.13 12.0 3.5 0.23 11.1 3.5 1.3 1 0 0 1 1 1 0 Thioredoxin Spc7 PF08317.11 ORF106827 - 0.7 8.7 36.3 0.39 9.5 4.2 3.2 1 1 1 3 3 3 0 Spc7 kinetochore protein IZUMO PF15005.6 ORF106827 - 6.3 7.3 10.3 2.4 8.6 4.1 2.5 1 1 1 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated GAS PF13851.6 ORF106827 - 9.1 5.6 33.5 1.4 8.2 0.4 3.7 3 1 0 3 3 3 0 Growth-arrest specific micro-tubule binding NadA PF02445.16 ORF104860 - 3.4e-91 305.5 0.0 3.8e-91 305.4 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein MMPL PF03176.15 ORF102273 - 0.03 13.3 17.6 0.02 13.8 15.9 1.4 1 1 0 1 1 1 0 MMPL family Patched PF02460.18 ORF102273 - 0.031 12.4 19.3 0.038 12.1 19.3 1.1 1 0 0 1 1 1 0 Patched family ZIP4_domain PF18292.1 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 0.098 12.6 1.6 0.17 11.8 0.0 2.1 1 1 1 2 2 2 0 Zinc transporter ZIP4 domain Borrelia_P83 PF05262.11 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 0.19 10.2 24.5 0.23 9.9 24.5 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF2681 PF10883.8 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 0.34 11.3 19.6 2.7 8.5 1.5 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2681) SpoIIIAH PF12685.7 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 0.36 10.6 29.1 0.065 13.1 24.8 1.7 2 0 0 2 2 2 0 SpoIIIAH-like protein Zip PF02535.22 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 1.2 8.2 12.2 2.7 7.1 12.2 1.6 1 1 0 1 1 1 0 ZIP Zinc transporter TMEM100 PF16311.5 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 1.4 8.5 0.0 1.4 8.5 0.0 2.6 2 1 1 3 3 3 0 Transmembrane protein 100 MCM3AP_GANP PF16769.5 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 2 6.6 22.4 3.2 5.9 22.4 1.2 1 0 0 1 1 1 0 MCM3AP domain of GANP Hid1 PF12722.7 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 2.2 6.3 20.8 2.8 5.9 20.8 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Peptidase_C37 PF05416.12 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 2.2 6.7 14.2 2.6 6.5 14.2 1.2 1 0 0 1 1 1 0 Southampton virus-type processing peptidase Presenilin PF01080.17 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_1 - 2.2 6.9 21.5 4.1 6.1 21.5 1.5 1 0 0 1 1 1 0 Presenilin GDC-P PF02347.16 NODE_25548_length_826_cov_274.268015_g19950_i0reverse_frame_1 - 0.29 9.9 0.0 0.41 9.4 0.0 1.1 1 0 0 1 1 1 0 Glycine cleavage system P-protein HRG PF16954.5 NODE_25525_length_827_cov_73.093434_g19931_i0forward_frame_1 - 0.67 10.4 9.5 2.4 8.6 0.3 3.2 3 0 0 3 3 3 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene Toxin_3 PF00537.18 NODE_25520_length_827_cov_93.896465_g19926_i0reverse_frame_1 - 4.1 7.7 8.4 14 5.9 1.0 2.6 2 0 0 2 2 2 0 Scorpion toxin-like domain FRG2 PF15315.6 NODE_25436_length_829_cov_57.428212_g19851_i0reverse_frame_3 - 1.5 9.0 7.5 0.51 10.5 4.4 1.9 2 1 0 2 2 2 0 Facioscapulohumeral muscular dystrophy candidate 2 DUF3440 PF11922.8 NODE_25436_length_829_cov_57.428212_g19851_i0forward_frame_3 - 0.056 13.1 0.4 0.097 12.4 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) v110 PF01639.17 NODE_25422_length_829_cov_151.166247_g19837_i0forward_frame_2 - 0.11 12.4 0.3 0.19 11.6 0.3 1.3 1 0 0 1 1 1 0 Viral family 110 eIF-5_eIF-2B PF01873.17 NODE_25397_length_830_cov_60.164780_g19816_i0reverse_frame_2 - 0.009 15.9 1.8 0.014 15.3 0.7 1.9 2 0 0 2 2 2 1 Domain found in IF2B/IF5 Sugar_tr PF00083.24 ORF9723 - 6.1e-30 104.5 8.1 4e-25 88.6 2.1 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF9723 - 2e-15 56.6 0.4 2.3e-15 56.4 0.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF9723 - 0.015 14.2 1.8 0.024 13.5 0.6 1.8 2 0 0 2 2 2 0 MFS_1 like family WTF PF03303.13 ORF9723 - 0.043 13.5 3.2 0.084 12.6 3.2 1.5 1 0 0 1 1 1 0 WTF protein NCD2 PF04905.13 ORF96804 - 0.0013 18.7 1.8 0.0021 18.0 1.8 1.3 1 0 0 1 1 1 1 NAB conserved region 2 (NCD2) TPR_4 PF07721.14 ORF94714 - 0.031 14.9 7.6 4.9 8.1 4.6 3.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Malate_synthase PF01274.22 ORF93605 - 8.5e-113 377.4 0.0 9.5e-113 377.2 0.0 1.0 1 0 0 1 1 1 1 Malate synthase CytB6-F_Fe-S PF08802.10 ORF90723 - 2.4 8.2 5.5 6.1 7.0 0.0 3.8 4 0 0 4 4 4 0 Cytochrome B6-F complex Fe-S subunit NCD2 PF04905.13 ORF90440 - 0.0013 18.7 1.8 0.0021 18.0 1.8 1.3 1 0 0 1 1 1 1 NAB conserved region 2 (NCD2) SET PF00856.28 ORF8854 - 6.8e-09 36.3 0.7 0.007 16.8 0.0 3.0 2 1 0 3 3 3 2 SET domain Amidase_2 PF01510.25 ORF87341 - 8.4e-26 90.9 0.0 1.5e-25 90.1 0.0 1.4 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase DUF547 PF04784.14 ORF84431 - 2.6e-12 46.9 0.0 4.5e-12 46.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF547 HMW1C_N PF18071.1 ORF84431 - 0.17 11.7 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 HMW1C N-terminal DUF2259 PF10016.9 ORF7992 - 0.18 11.7 0.8 0.28 11.1 0.8 1.3 1 0 0 1 1 1 0 Predicted secreted protein (DUF2259) WYL_3 PF18488.1 ORF79208 - 0.00038 20.8 0.5 0.00088 19.6 0.5 1.6 1 0 0 1 1 1 1 WYL domain DAG_kinase_N PF14513.6 ORF79208 - 0.0033 17.7 0.3 0.0033 17.7 0.3 1.6 2 0 0 2 2 2 1 Diacylglycerol kinase N-terminus Interferon PF00143.19 ORF79208 - 0.049 13.8 0.1 0.092 12.9 0.1 1.4 1 0 0 1 1 1 0 Interferon alpha/beta domain HECT PF00632.25 ORF75526 - 6.5e-51 173.6 0.1 7.7e-51 173.4 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) MORN PF02493.20 ORF71222 - 5.1e-24 82.7 32.0 3.2e-07 29.9 0.3 5.8 6 0 0 6 6 6 5 MORN repeat AAA PF00004.29 ORF68903 - 1.2e-16 61.4 0.0 2e-16 60.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF68903 - 0.00026 21.4 0.0 0.00048 20.6 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF68903 - 0.00098 19.1 0.0 0.0022 18.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF68903 - 0.0019 18.7 0.0 0.0063 17.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 ORF68903 - 0.0021 18.3 0.0 0.004 17.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF68903 - 0.0038 17.4 0.4 0.0072 16.5 0.0 1.7 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 ORF68903 - 0.004 16.9 0.0 0.0069 16.1 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_28 PF13521.6 ORF68903 - 0.007 16.6 0.2 0.015 15.6 0.0 1.6 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF68903 - 0.01 15.0 0.0 0.019 14.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) TIP49 PF06068.13 ORF68903 - 0.014 14.7 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain Mg_chelatase PF01078.21 ORF68903 - 0.017 14.5 0.0 0.037 13.4 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 ORF68903 - 0.021 15.2 0.0 0.1 13.0 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_7 PF12775.7 ORF68903 - 0.026 14.0 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_11 PF13086.6 ORF68903 - 0.029 14.1 0.4 0.12 12.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 ORF68903 - 0.033 13.9 0.0 0.063 13.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 ORF68903 - 0.034 13.9 0.0 0.056 13.2 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_3 PF07726.11 ORF68903 - 0.036 13.9 0.0 0.075 12.9 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 ORF68903 - 0.047 13.4 0.5 0.093 12.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain GCS PF03074.16 ORF64672 - 4.5e-62 210.5 0.0 5.3e-62 210.3 0.0 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase Rhomboid PF01694.22 ORF64623 - 4.3e-29 101.5 14.7 4.3e-29 101.5 14.7 1.7 2 0 0 2 2 2 1 Rhomboid family Rhomboid_N PF12122.8 ORF64623 - 6.1e-29 100.0 0.1 1.1e-28 99.2 0.1 1.4 1 0 0 1 1 1 1 Cytoplasmic N-terminal domain of rhomboid serine protease DUF485 PF04341.12 ORF64623 - 4.7 7.2 7.2 2.4 8.2 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function, DUF485 ECH_2 PF16113.5 ORF62199 - 5e-75 253.1 0.0 5.5e-75 252.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 ORF62199 - 1.8e-17 63.5 0.1 4.5e-17 62.2 0.0 1.6 2 0 0 2 2 2 1 Enoyl-CoA hydratase/isomerase SH3_2 PF07653.17 ORF61668 - 5.2e-10 38.9 0.1 0.00042 19.9 0.1 2.3 2 0 0 2 2 2 2 Variant SH3 domain SH3_1 PF00018.28 ORF61668 - 2.1e-08 33.7 1.6 0.0014 18.2 0.3 2.3 2 0 0 2 2 2 2 SH3 domain SH3_9 PF14604.6 ORF61668 - 0.00021 21.1 0.4 0.2 11.5 0.0 2.4 2 0 0 2 2 2 2 Variant SH3 domain SH3_16 PF18348.1 ORF61668 - 0.012 15.4 1.4 0.68 9.8 0.2 2.5 2 0 0 2 2 2 0 Bacterial dipeptidyl-peptidase Sh3 domain Fez1 PF06818.15 ORF59055 - 0.0085 16.6 26.7 0.0085 16.6 26.7 2.2 2 0 0 2 2 2 1 Fez1 EzrA PF06160.12 ORF59055 - 0.012 13.8 16.4 0.025 12.8 16.4 1.5 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Ribosomal_S10 PF00338.22 ORF59055 - 0.069 13.4 0.4 1.6 9.0 0.0 2.7 2 1 0 2 2 2 0 Ribosomal protein S10p/S20e NPV_P10 PF05531.12 ORF59055 - 0.82 10.2 7.5 1 9.9 0.8 2.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Baculo_F PF12259.8 ORF59055 - 0.92 8.0 10.6 1.6 7.2 0.9 2.0 1 1 1 2 2 2 0 Baculovirus F protein BPD_transp_1 PF00528.22 ORF58377 - 1.7e-22 80.1 5.1 1.7e-22 80.1 5.1 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ECF_trnsprt PF12822.7 ORF58377 - 0.086 12.9 9.3 0.05 13.7 7.3 1.6 2 1 0 2 2 2 0 ECF transporter, substrate-specific component NCD2 PF04905.13 ORF57616 - 0.0013 18.7 1.8 0.0021 18.0 1.8 1.3 1 0 0 1 1 1 1 NAB conserved region 2 (NCD2) Cortex-I_coil PF09304.10 ORF5528 - 0.039 14.2 0.6 0.12 12.6 0.1 2.1 2 0 0 2 2 2 0 Cortexillin I, coiled coil PARP PF00644.20 ORF55101 - 4.6e-06 26.4 0.0 7.6e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain PTS_2-RNA PF01885.16 ORF55101 - 0.015 15.3 0.0 0.028 14.5 0.0 1.4 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Band_3_cyto PF07565.13 ORF53119 - 0.092 12.5 0.1 0.17 11.7 0.1 1.3 1 0 0 1 1 1 0 Band 3 cytoplasmic domain IKBKB_SDD PF18397.1 ORF53119 - 0.16 11.2 2.0 0.11 11.7 0.3 1.6 2 0 0 2 2 2 0 IQBAL scaffold dimerization domain ABC_tran PF00005.27 ORF5219 - 2e-30 106.1 0.0 3.9e-30 105.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF5219 - 1.2e-07 31.4 1.4 1.1e-05 25.0 0.2 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF5219 - 0.00099 19.2 0.3 0.0031 17.6 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_24 PF13479.6 ORF5219 - 0.002 17.9 0.0 0.0029 17.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain DUF87 PF01935.17 ORF5219 - 0.015 15.4 0.1 0.039 14.1 0.0 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_29 PF13555.6 ORF5219 - 0.016 14.9 0.0 0.04 13.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATP_bind_1 PF03029.17 ORF5219 - 0.017 14.9 0.3 0.5 10.1 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein DUF3884 PF13024.6 ORF5219 - 0.031 13.8 0.1 0.13 11.8 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3884) AAA_23 PF13476.6 ORF5219 - 0.035 14.6 1.9 0.11 13.0 1.9 2.0 1 1 0 1 1 1 0 AAA domain KH_2 PF07650.17 ORF5219 - 0.036 13.9 0.5 0.11 12.3 0.5 1.8 1 0 0 1 1 1 0 KH domain DUF815 PF05673.13 ORF5219 - 0.043 13.0 0.0 0.066 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) MeaB PF03308.16 ORF5219 - 0.045 12.7 0.0 0.069 12.1 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_5 PF07728.14 ORF5219 - 0.046 13.7 0.5 22 5.1 0.1 3.0 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 ORF5219 - 0.073 13.0 0.6 0.33 10.9 0.1 2.0 2 0 0 2 2 2 0 NTPase AAA_22 PF13401.6 ORF5219 - 0.074 13.3 0.8 0.37 11.0 0.8 2.0 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 ORF5219 - 0.082 13.3 0.4 0.63 10.5 0.4 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 ORF5219 - 0.1 13.2 0.2 0.16 12.5 0.2 1.6 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 ORF5219 - 0.1 11.8 0.3 0.39 9.8 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain RsgA_GTPase PF03193.16 ORF5219 - 0.1 12.5 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase IstB_IS21 PF01695.17 ORF5219 - 0.1 12.3 0.1 1.1 8.9 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein SbcCD_C PF13558.6 ORF5219 - 0.14 12.4 0.1 0.73 10.1 0.1 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 ORF5219 - 0.18 11.5 0.3 0.92 9.2 0.3 2.0 1 1 0 1 1 1 0 AAA domain NSP10 PF09401.10 ORF50408 - 0.037 14.1 0.1 0.057 13.5 0.1 1.3 1 0 0 1 1 1 0 RNA synthesis protein NSP10 WD40 PF00400.32 ORF49747 - 6.2e-21 74.3 6.0 0.00067 20.4 0.0 7.0 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF49747 - 1.4e-12 47.7 0.0 0.29 11.4 0.0 5.6 1 1 4 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF49747 - 3.7e-09 36.0 7.8 0.075 12.0 0.1 5.2 1 1 5 6 6 6 3 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF49747 - 0.027 13.1 0.0 0.91 8.1 0.0 2.3 1 1 0 2 2 2 0 Nucleoporin Nup120/160 VID27 PF08553.10 ORF49747 - 0.26 10.3 0.0 0.56 9.2 0.0 1.4 1 1 0 1 1 1 0 VID27 C-terminal WD40-like domain BET PF17035.5 ORF44762 - 0.032 14.4 1.0 0.032 14.4 1.0 2.3 2 0 0 2 2 2 0 Bromodomain extra-terminal - transcription regulation Pup PF05639.11 ORF44762 - 1.3 10.0 6.6 16 6.5 1.1 3.2 3 0 0 3 3 3 0 Pup-like protein DUF3450 PF11932.8 ORF44762 - 1.3 8.3 9.7 0.16 11.3 5.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) YabA PF06156.13 ORF4440 - 0.00086 19.9 0.4 0.002 18.7 0.4 1.6 1 0 0 1 1 1 1 Initiation control protein YabA RRM_1 PF00076.22 ORF43353 - 1.7e-32 111.1 0.3 3.8e-22 77.9 0.1 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF43353 - 5.7e-05 22.7 0.1 0.31 10.6 0.1 2.3 1 1 1 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 ORF43353 - 0.00012 22.1 0.1 0.38 10.9 0.0 2.3 2 0 0 2 2 2 2 Limkain b1 PHM7_cyt PF14703.6 ORF43353 - 0.0067 16.7 0.0 0.097 12.9 0.0 2.2 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter RRM_7 PF16367.5 ORF43353 - 0.011 15.9 0.3 0.15 12.2 0.1 2.5 1 1 1 2 2 2 0 RNA recognition motif OB_RNB PF08206.11 ORF43353 - 0.015 14.9 0.2 1.6 8.5 0.0 2.5 2 0 0 2 2 2 0 Ribonuclease B OB domain TRP PF06011.12 ORF43320 - 1.2e-07 30.8 9.1 1.7e-07 30.3 9.1 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Peptidase_A24 PF01478.18 ORF43320 - 0.013 15.9 0.5 0.013 15.9 0.5 2.7 2 1 0 2 2 2 0 Type IV leader peptidase family IpaC_SipC PF09599.10 ORF43320 - 2.3 7.7 4.8 3.2 7.2 4.8 1.1 1 0 0 1 1 1 0 Salmonella-Shigella invasin protein C (IpaC_SipC) CotJB PF12652.7 ORF40832 - 2.8 8.2 5.5 5.3 7.3 0.1 3.3 3 1 0 3 3 3 0 CotJB protein NCD2 PF04905.13 ORF38520 - 0.0013 18.7 1.8 0.0021 18.0 1.8 1.3 1 0 0 1 1 1 1 NAB conserved region 2 (NCD2) TPR_14 PF13428.6 ORF37432 - 4.4e-10 39.5 1.6 0.0012 19.5 0.0 4.9 1 1 4 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF37432 - 2.4e-05 24.7 0.0 0.56 10.8 0.0 4.0 2 1 3 5 5 5 2 Tetratricopeptide repeat HAT PF02184.16 ORF37432 - 0.00022 21.1 9.5 0.056 13.4 0.0 4.6 5 0 0 5 5 5 2 HAT (Half-A-TPR) repeat TPR_6 PF13174.6 ORF37432 - 0.005 17.4 0.6 9.6 7.1 0.0 4.4 3 2 1 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF37432 - 0.014 15.5 0.2 3.6 7.9 0.0 3.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF37432 - 0.12 13.0 0.1 1.9 9.2 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat WYL_3 PF18488.1 ORF36160 - 0.00038 20.8 0.5 0.00088 19.6 0.5 1.6 1 0 0 1 1 1 1 WYL domain DAG_kinase_N PF14513.6 ORF36160 - 0.0033 17.7 0.3 0.0033 17.7 0.3 1.6 2 0 0 2 2 2 1 Diacylglycerol kinase N-terminus Interferon PF00143.19 ORF36160 - 0.049 13.8 0.1 0.092 12.9 0.1 1.4 1 0 0 1 1 1 0 Interferon alpha/beta domain ABC_tran PF00005.27 ORF34910 - 8.5e-19 68.4 0.0 1.4e-18 67.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF34910 - 0.00015 21.5 0.5 0.00019 21.2 0.5 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_15 PF13175.6 ORF34910 - 0.001 18.9 1.0 0.0016 18.2 1.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 ORF34910 - 0.0012 18.8 0.0 0.0019 18.1 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 ORF34910 - 0.0022 18.4 0.0 0.0042 17.5 0.0 1.6 2 0 0 2 2 1 1 AAA ATPase domain PRK PF00485.18 ORF34910 - 0.0055 16.5 0.0 0.0092 15.7 0.0 1.5 1 1 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_29 PF13555.6 ORF34910 - 0.0062 16.2 0.0 0.015 15.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_14 PF13173.6 ORF34910 - 0.025 14.6 0.1 0.06 13.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF34910 - 0.033 14.1 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_21 PF13304.6 ORF34910 - 0.046 13.5 0.3 0.15 11.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Zeta_toxin PF06414.12 ORF34910 - 0.048 12.9 0.0 0.083 12.2 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin Ras PF00071.22 ORF34910 - 0.063 12.9 0.1 1.2 8.7 0.0 2.6 2 1 1 3 3 3 0 Ras family AAA_22 PF13401.6 ORF34910 - 0.076 13.3 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 ORF34910 - 0.092 12.6 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DUF815 PF05673.13 ORF34910 - 0.1 11.8 0.0 0.16 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) MMR_HSR1 PF01926.23 ORF34910 - 0.12 12.5 0.0 0.22 11.6 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase NB-ARC PF00931.22 ORF34910 - 0.21 10.8 0.0 0.32 10.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_23 PF13476.6 ORF34910 - 0.24 11.9 3.7 0.25 11.8 2.3 1.9 2 1 0 2 2 1 0 AAA domain TP_methylase PF00590.20 ORF338 - 3e-14 53.5 0.0 3.8e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases RBP_receptor PF14752.6 ORF32894 - 3.9e-09 35.7 5.8 5.1e-09 35.3 5.8 1.2 1 0 0 1 1 1 1 Retinol binding protein receptor Neur_chan_memb PF02932.16 ORF32894 - 2 8.4 5.5 4 7.4 5.5 1.6 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Hid1 PF12722.7 ORF32894 - 4.5 5.3 14.8 5.9 4.9 14.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein SDA1 PF05285.12 ORF32894 - 5.9 6.2 28.7 8.2 5.8 28.7 1.2 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF32894 - 8 4.5 27.2 10 4.2 27.2 1.2 1 0 0 1 1 1 0 Nop14-like family APG5 PF04106.12 ORF26802 - 0.01 15.4 0.9 0.01 15.4 0.9 2.2 2 0 0 2 2 2 0 Autophagy protein Apg5 FNIP_M PF14637.6 ORF26802 - 0.034 14.1 3.4 0.078 13.0 1.0 2.1 2 0 0 2 2 2 0 Folliculin-interacting protein middle domain DUF1451 PF07295.11 ORF26802 - 0.15 12.1 3.6 7.4 6.6 0.4 2.3 2 0 0 2 2 2 0 Zinc-ribbon containing domain DUF4404 PF14357.6 ORF26802 - 0.79 10.4 4.7 1.9 9.2 0.6 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4404) Tn7_Tnp_TnsA_C PF08721.11 ORF26802 - 1.7 9.3 6.8 0.26 12.0 1.1 2.7 3 0 0 3 3 3 0 TnsA endonuclease C terminal RRM_1 PF00076.22 ORF23490 - 1.7e-16 59.8 0.0 3.8e-16 58.7 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) U1snRNP70_N PF12220.8 ORF23490 - 0.0036 17.9 0.5 0.0036 17.9 0.5 3.3 2 1 1 3 3 3 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Vfa1 PF08432.10 ORF23490 - 0.63 10.4 25.5 0.11 12.8 18.7 2.2 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 Neur_chan_memb PF02932.16 ORF23490 - 2.2 8.3 10.1 3.1 7.8 10.1 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region HECT PF00632.25 ORF2262 - 6.5e-51 173.6 0.1 7.7e-51 173.4 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) RRM_1 PF00076.22 ORF22282 - 1.7e-32 111.1 0.3 3.8e-22 77.9 0.1 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF22282 - 5.7e-05 22.7 0.1 0.31 10.6 0.1 2.3 1 1 1 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 ORF22282 - 0.00012 22.1 0.1 0.38 10.9 0.0 2.3 2 0 0 2 2 2 2 Limkain b1 PHM7_cyt PF14703.6 ORF22282 - 0.0067 16.7 0.0 0.097 12.9 0.0 2.2 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter RRM_7 PF16367.5 ORF22282 - 0.011 15.9 0.3 0.15 12.2 0.1 2.5 1 1 1 2 2 2 0 RNA recognition motif OB_RNB PF08206.11 ORF22282 - 0.015 14.9 0.2 1.6 8.5 0.0 2.5 2 0 0 2 2 2 0 Ribonuclease B OB domain DUF3053 PF11254.8 ORF2204 - 2.1e-93 312.0 4.4 2.4e-93 311.7 4.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3053) Methyltransf_21 PF05050.12 ORF21949 - 3.4e-05 23.9 0.0 0.00011 22.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase FkbM domain EamA PF00892.20 ORF19302 - 6.1e-20 71.8 32.8 2.7e-12 47.0 10.8 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF5472 PF17566.2 ORF19302 - 0.26 11.3 1.8 15 5.6 0.3 3.5 3 1 0 3 3 3 0 Family of unknown function (DUF5472) DUF998 PF06197.13 ORF19302 - 0.32 10.6 5.6 0.38 10.3 4.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF998) NCD2 PF04905.13 ORF1892 - 0.0013 18.7 1.8 0.0021 18.0 1.8 1.3 1 0 0 1 1 1 1 NAB conserved region 2 (NCD2) Abhydro_lipase PF04083.16 ORF17649 - 4.6e-15 54.9 0.1 3.2e-14 52.2 0.0 2.2 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF17649 - 1.7e-13 50.8 0.0 2.1e-13 50.5 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF17649 - 4.3e-05 22.9 0.0 8.8e-05 21.9 0.0 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 DUF3098 PF11297.8 ORF17649 - 0.051 13.2 0.0 0.12 12.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3098) Enkurin PF13864.6 ORF16959 - 3.7e-25 88.2 9.2 6.9e-25 87.3 9.2 1.5 1 0 0 1 1 1 1 Calmodulin-binding LsmAD PF06741.13 ORF16959 - 0.63 10.6 6.7 0.26 11.8 0.5 2.3 2 0 0 2 2 2 0 LsmAD domain DUF4355 PF14265.6 ORF16959 - 2.6 8.3 16.2 7.4 6.8 5.4 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF4355) ABC_tran_CTD PF16326.5 ORF16959 - 6 7.2 14.4 0.92 9.8 3.6 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain DUF2202 PF09968.9 ORF16583 - 0.17 11.7 2.3 0.22 11.4 0.4 1.9 1 1 0 2 2 2 0 Uncharacterized protein domain (DUF2202) FtsQ PF03799.15 ORF1556 - 1.7e-28 99.8 0.1 2.6e-28 99.2 0.1 1.3 1 0 0 1 1 1 1 Cell division protein FtsQ POTRA_1 PF08478.10 ORF1556 - 7e-20 71.1 0.1 1.6e-19 70.0 0.1 1.6 1 0 0 1 1 1 1 POTRA domain, FtsQ-type GCV_T PF01571.21 ORF14044 - 2.7e-24 85.9 0.0 3.6e-24 85.5 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 ORF14044 - 2.1e-20 72.4 0.0 3.4e-20 71.8 0.0 1.3 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 ORF14044 - 0.012 15.8 0.0 0.047 13.8 0.0 2.0 2 0 0 2 2 2 0 Sarcosine oxidase, gamma subunit family ABC_tran PF00005.27 ORF111673 - 8.5e-19 68.4 0.0 1.4e-18 67.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF111673 - 0.00015 21.5 0.5 0.00019 21.2 0.5 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_15 PF13175.6 ORF111673 - 0.001 18.9 1.0 0.0016 18.2 1.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 ORF111673 - 0.0012 18.8 0.0 0.0019 18.1 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 ORF111673 - 0.0022 18.4 0.0 0.0042 17.5 0.0 1.6 2 0 0 2 2 1 1 AAA ATPase domain PRK PF00485.18 ORF111673 - 0.0055 16.5 0.0 0.0092 15.7 0.0 1.5 1 1 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_29 PF13555.6 ORF111673 - 0.0062 16.2 0.0 0.015 15.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_14 PF13173.6 ORF111673 - 0.025 14.6 0.1 0.06 13.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF111673 - 0.033 14.1 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_21 PF13304.6 ORF111673 - 0.046 13.5 0.3 0.15 11.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Zeta_toxin PF06414.12 ORF111673 - 0.048 12.9 0.0 0.083 12.2 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin Ras PF00071.22 ORF111673 - 0.063 12.9 0.1 1.2 8.7 0.0 2.6 2 1 1 3 3 3 0 Ras family AAA_22 PF13401.6 ORF111673 - 0.076 13.3 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 ORF111673 - 0.092 12.6 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DUF815 PF05673.13 ORF111673 - 0.1 11.8 0.0 0.16 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) MMR_HSR1 PF01926.23 ORF111673 - 0.12 12.5 0.0 0.22 11.6 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase NB-ARC PF00931.22 ORF111673 - 0.21 10.8 0.0 0.32 10.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_23 PF13476.6 ORF111673 - 0.24 11.9 3.7 0.25 11.8 2.3 1.9 2 1 0 2 2 1 0 AAA domain AAA PF00004.29 ORF109201 - 1.2e-16 61.4 0.0 2e-16 60.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF109201 - 0.00026 21.4 0.0 0.00048 20.6 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF109201 - 0.00098 19.1 0.0 0.0022 18.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF109201 - 0.0019 18.7 0.0 0.0063 17.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 ORF109201 - 0.0021 18.3 0.0 0.004 17.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF109201 - 0.0038 17.4 0.4 0.0072 16.5 0.0 1.7 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 ORF109201 - 0.004 16.9 0.0 0.0069 16.1 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_28 PF13521.6 ORF109201 - 0.007 16.6 0.2 0.015 15.6 0.0 1.6 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF109201 - 0.01 15.0 0.0 0.019 14.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) TIP49 PF06068.13 ORF109201 - 0.014 14.7 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain Mg_chelatase PF01078.21 ORF109201 - 0.017 14.5 0.0 0.037 13.4 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 ORF109201 - 0.021 15.2 0.0 0.1 13.0 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_7 PF12775.7 ORF109201 - 0.026 14.0 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_11 PF13086.6 ORF109201 - 0.029 14.1 0.4 0.12 12.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 ORF109201 - 0.033 13.9 0.0 0.063 13.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 ORF109201 - 0.034 13.9 0.0 0.056 13.2 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_3 PF07726.11 ORF109201 - 0.036 13.9 0.0 0.075 12.9 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 ORF109201 - 0.047 13.4 0.5 0.093 12.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain NCD2 PF04905.13 ORF10807 - 0.0013 18.7 1.8 0.0021 18.0 1.8 1.3 1 0 0 1 1 1 1 NAB conserved region 2 (NCD2) DUF724 PF05266.14 ORF107534 - 7.7 6.3 24.0 4.3 7.1 9.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF724) Ribosomal_L1 PF00687.21 ORF106835 - 5.6e-27 94.8 0.0 7.1e-27 94.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family RAP PF08373.10 ORF105740 - 0.0011 19.0 0.0 0.0067 16.5 0.0 2.2 2 1 0 2 2 2 1 RAP domain NCD2 PF04905.13 ORF105033 - 0.0013 18.7 1.8 0.0021 18.0 1.8 1.3 1 0 0 1 1 1 1 NAB conserved region 2 (NCD2) SseC PF04888.12 ORF103842 - 0.00035 20.3 2.1 0.00057 19.6 2.1 1.2 1 0 0 1 1 1 1 Secretion system effector C (SseC) like family Nop14 PF04147.12 ORF102549 - 4.5e-13 48.4 6.4 5.4e-13 48.1 6.4 1.1 1 0 0 1 1 1 1 Nop14-like family ECH_2 PF16113.5 ORF101099 - 0.0099 15.4 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF413 PF04219.12 ORF101099 - 0.15 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF GRDP-like PF07173.12 ORF100722 - 0.00056 20.6 5.5 0.0047 17.6 1.9 2.6 1 1 1 2 2 2 2 Glycine-rich domain-containing protein-like Laps PF10169.9 ORF100722 - 0.2 12.3 3.3 0.18 12.3 1.8 1.8 1 1 1 2 2 2 0 Learning-associated protein Pkinase PF00069.25 ORF100126 - 3.6e-05 23.3 0.0 4.6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF100126 - 0.049 13.5 0.0 0.084 12.8 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family YpzG PF14139.6 ORF100126 - 0.073 13.3 0.1 0.14 12.3 0.1 1.4 1 0 0 1 1 1 0 YpzG-like protein Choline_kinase PF01633.20 ORF100126 - 0.14 11.7 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks60.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks60.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks60.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks60.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AAA_30 PF13604.6 NODE_25639_length_824_cov_3.337136_g20030_i0reverse_frame_1 - 1.7e-08 34.4 0.0 2.6e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 NODE_25639_length_824_cov_3.337136_g20030_i0reverse_frame_1 - 0.0015 18.3 0.0 0.0033 17.2 0.0 1.5 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_18 PF13238.6 NODE_25639_length_824_cov_3.337136_g20030_i0reverse_frame_1 - 0.071 13.7 0.0 0.22 12.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain ResIII PF04851.15 NODE_25639_length_824_cov_3.337136_g20030_i0reverse_frame_1 - 0.098 12.6 2.5 1.1 9.3 0.1 3.0 1 1 3 4 4 4 0 Type III restriction enzyme, res subunit FA_desaturase_2 PF03405.14 NODE_25639_length_824_cov_3.337136_g20030_i0forward_frame_1 - 0.3 9.9 0.0 0.43 9.4 0.0 1.1 1 0 0 1 1 1 0 Fatty acid desaturase LRRNT PF01462.18 NODE_25633_length_824_cov_77.278834_g20024_i0reverse_frame_1 - 1.1 9.0 4.6 3.1 7.5 0.1 3.2 3 0 0 3 3 3 0 Leucine rich repeat N-terminal domain Asp PF00026.23 NODE_25629_length_824_cov_106.195184_g6421_i1reverse_frame_1 - 2.4e-28 99.5 1.9 3e-28 99.1 1.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_25629_length_824_cov_106.195184_g6421_i1reverse_frame_1 - 0.00021 21.6 0.4 0.0019 18.5 0.1 2.1 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal DUF1870 PF08965.10 NODE_25571_length_825_cov_2094.189873_g19971_i0forward_frame_1 - 0.046 13.7 0.1 0.22 11.5 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1870) Aconitase PF00330.20 NODE_25568_length_826_cov_1.883692_g19968_i0reverse_frame_2 - 3.1e-16 59.4 0.0 3.8e-16 59.1 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) PAP_assoc PF03828.19 NODE_25563_length_826_cov_4.523388_g19963_i0forward_frame_3 - 8.1 6.7 6.7 0.77 10.0 0.5 2.5 2 1 0 2 2 2 0 Cid1 family poly A polymerase DUF2358 PF10184.9 NODE_25548_length_826_cov_274.268015_g19950_i0forward_frame_2 - 0.0034 17.6 0.0 0.0061 16.8 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2358) SnoaL_2 PF12680.7 NODE_25548_length_826_cov_274.268015_g19950_i0forward_frame_2 - 0.0057 17.3 0.1 0.0096 16.5 0.1 1.4 1 0 0 1 1 1 1 SnoaL-like domain EIIBC-GUT_N PF03612.14 NODE_25481_length_828_cov_3.736444_g19892_i0reverse_frame_3 - 2.3e-67 226.3 0.7 3.9e-67 225.6 0.7 1.3 1 0 0 1 1 1 1 Sorbitol phosphotransferase enzyme II N-terminus EIIBC-GUT_C PF07663.11 NODE_25481_length_828_cov_3.736444_g19892_i0reverse_frame_3 - 6.2e-11 42.3 1.5 6.2e-11 42.3 1.5 2.2 2 1 0 2 2 2 1 Sorbitol phosphotransferase enzyme II C-terminus Gate PF07670.14 NODE_25481_length_828_cov_3.736444_g19892_i0reverse_frame_3 - 0.0094 16.2 5.2 0.018 15.3 5.2 1.5 1 0 0 1 1 1 1 Nucleoside recognition YflT PF11181.8 NODE_25481_length_828_cov_3.736444_g19892_i0reverse_frame_3 - 0.15 12.6 0.0 0.25 11.9 0.0 1.3 1 0 0 1 1 1 0 Heat induced stress protein YflT MBDa PF16564.5 NODE_25481_length_828_cov_3.736444_g19892_i0forward_frame_2 - 0.026 14.7 0.6 0.053 13.7 0.6 1.5 1 0 0 1 1 1 0 p55-binding region of Methyl-CpG-binding domain proteins MBD FAM76 PF16046.5 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.00072 19.0 47.5 0.022 14.1 23.7 2.4 1 1 1 2 2 2 2 FAM76 protein DUF883 PF05957.13 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.044 14.4 1.6 0.044 14.4 1.6 4.0 2 1 1 4 4 4 0 Bacterial protein of unknown function (DUF883) Herpes_UL33 PF03581.13 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.054 13.9 0.4 1.3 9.5 0.0 2.6 2 0 0 2 2 2 0 Herpesvirus UL33-like protein FUSC PF04632.12 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.068 11.7 1.5 0.074 11.6 1.5 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Filament PF00038.21 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.18 11.3 48.1 0.41 10.2 5.6 3.5 1 1 2 3 3 3 0 Intermediate filament protein Tropomyosin_1 PF12718.7 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.46 10.6 58.8 0.2 11.8 4.8 4.8 1 1 3 4 4 4 0 Tropomyosin like Atg14 PF10186.9 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.58 9.2 46.0 0.068 12.3 13.0 3.0 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 FAM184 PF15665.5 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.81 9.4 45.6 1.1 9.0 3.2 3.3 1 1 1 3 3 3 0 Family with sequence similarity 184, A and B Spc7 PF08317.11 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 3.2 6.6 55.6 0.11 11.4 19.7 2.9 1 1 0 2 2 2 0 Spc7 kinetochore protein ATG16 PF08614.11 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 3.7 7.7 48.4 0.61 10.3 11.7 3.5 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Pox_A_type_inc PF04508.12 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 6.1 6.9 8.9 2.2 8.3 0.1 4.8 4 0 0 4 4 4 0 Viral A-type inclusion protein repeat Fez1 PF06818.15 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 8 6.9 45.5 5.8 7.3 13.3 2.8 1 1 1 2 2 2 0 Fez1 CdvA PF18822.1 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 8.7 6.2 47.5 0.068 13.0 3.6 4.6 2 1 2 4 4 4 0 CdvA-like coiled-coil domain DUF3584 PF12128.8 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 9.2 3.6 46.4 0.21 9.1 30.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) KH_1 PF00013.29 ORF97432 - 0.011 15.6 1.3 0.02 14.7 0.4 1.9 2 0 0 2 2 2 0 KH domain Phage_TAC_11 PF11836.8 ORF96189 - 0.18 11.9 0.6 11 6.2 0.1 2.5 1 1 2 3 3 3 0 Phage tail tube protein, GTA-gp10 ATG16 PF08614.11 ORF88903 - 0.015 15.5 6.0 0.015 15.5 6.0 1.8 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Spc24 PF08286.11 ORF88903 - 0.24 11.7 0.9 7.3 6.9 0.0 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 LAP1C PF05609.12 ORF87827 - 0.45 9.5 29.5 0.63 9.1 29.5 1.3 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) SOBP PF15279.6 ORF87827 - 1.1 9.8 14.6 1.3 9.6 14.6 1.2 1 0 0 1 1 1 0 Sine oculis-binding protein DUF936 PF06075.12 ORF87827 - 2.4 7.0 33.0 3 6.6 33.0 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) DUF966 PF06136.13 ORF87827 - 5.5 6.6 34.3 7.2 6.2 34.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Pro_isomerase PF00160.21 ORF85901 - 4.2e-44 150.6 0.0 7.3e-44 149.8 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CBS PF00571.28 ORF85168 - 1.2e-18 67.3 0.1 6.8e-05 23.2 0.0 4.4 4 1 0 4 4 4 4 CBS domain NlpE_C PF17185.4 ORF85168 - 0.059 13.7 0.0 1.6 9.1 0.0 2.3 2 0 0 2 2 2 0 NlpE C-terminal OB domain BTHB PF18410.1 ORF85168 - 0.21 11.4 0.0 0.35 10.7 0.0 1.3 1 0 0 1 1 1 0 Basic tilted helix bundle domain SKIP_SNW PF02731.15 ORF8179 - 2.7e-12 46.6 7.4 2.7e-12 46.6 7.4 2.4 2 0 0 2 2 2 1 SKIP/SNW domain Atg14 PF10186.9 ORF8179 - 8.8 5.3 16.1 12 4.9 16.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4200 PF13863.6 ORF8085 - 0.017 15.5 5.9 0.038 14.4 5.9 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) HTH_40 PF14493.6 ORF8085 - 0.23 11.9 7.4 1.2 9.6 0.3 3.6 2 2 2 4 4 4 0 Helix-turn-helix domain Laminin_II PF06009.12 ORF8085 - 0.24 11.4 3.8 0.19 11.8 1.9 1.8 2 0 0 2 2 2 0 Laminin Domain II Tropomyosin_1 PF12718.7 ORF8085 - 0.29 11.3 6.6 0.53 10.4 6.6 1.5 1 0 0 1 1 1 0 Tropomyosin like DUF1664 PF07889.12 ORF8085 - 0.87 9.6 9.1 1.1 9.3 4.2 2.6 2 2 0 2 2 2 0 Protein of unknown function (DUF1664) DUF725 PF05267.12 ORF8085 - 0.94 9.5 13.1 0.037 14.0 3.9 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF725) PhoLip_ATPase_C PF16212.5 ORF79949 - 2e-46 158.8 28.1 2.2e-46 158.6 28.1 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase_3 PF08282.12 ORF79949 - 0.026 14.3 0.1 0.045 13.5 0.1 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Cwf_Cwc_15 PF04889.12 ORF74438 - 4.3 7.0 28.8 3.3 7.4 5.5 2.1 1 1 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein Exo_endo_phos PF03372.23 ORF73018 - 1.7e-05 24.4 0.0 4.4e-05 23.1 0.0 1.7 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Pro_isomerase PF00160.21 ORF71242 - 4.2e-44 150.6 0.0 7.3e-44 149.8 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Kelch_4 PF13418.6 ORF71212 - 4.2e-13 49.1 10.0 0.0024 17.9 0.9 5.0 4 1 0 4 4 4 3 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF71212 - 7e-09 35.8 7.4 0.00094 19.4 1.4 4.6 4 1 0 4 4 4 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF71212 - 1.4e-08 34.5 4.6 6.9e-05 22.7 0.2 3.7 3 1 0 3 3 3 3 Kelch motif Kelch_6 PF13964.6 ORF71212 - 9.1e-07 29.0 10.7 0.00075 19.7 0.2 4.5 4 1 0 4 4 4 2 Kelch motif Kelch_1 PF01344.25 ORF71212 - 0.052 13.1 12.2 0.08 12.5 0.1 3.7 4 0 0 4 4 4 0 Kelch motif Kelch_2 PF07646.15 ORF71212 - 0.23 11.5 7.5 1.1 9.4 0.0 4.1 4 2 0 4 4 4 0 Kelch motif HemY_N PF07219.13 ORF70627 - 0.0013 18.9 0.0 0.002 18.3 0.0 1.2 1 0 0 1 1 1 1 HemY protein N-terminus Cadherin_C_2 PF16492.5 ORF70627 - 0.046 14.5 0.0 0.1 13.4 0.0 1.6 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal Comm PF15957.5 ORF70627 - 0.049 14.0 0.0 0.1 12.9 0.0 1.5 1 0 0 1 1 1 0 Commissureless PseudoU_synth_1 PF01416.20 ORF68704 - 2.7e-09 37.4 0.0 5.3e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 tRNA pseudouridine synthase Tropomyosin_1 PF12718.7 ORF60614 - 0.001 19.2 3.9 0.0017 18.5 3.9 1.3 1 0 0 1 1 1 1 Tropomyosin like DUF4200 PF13863.6 ORF60614 - 0.0095 16.3 5.9 0.02 15.3 5.9 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) Laminin_II PF06009.12 ORF60614 - 0.01 15.9 2.4 0.01 15.9 2.4 1.8 2 0 0 2 2 2 0 Laminin Domain II DUF1664 PF07889.12 ORF60614 - 0.25 11.4 6.7 0.38 10.8 2.4 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) DUF725 PF05267.12 ORF60614 - 2.5 8.1 12.9 0.093 12.7 3.7 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF725) RR_TM4-6 PF06459.12 ORF58552 - 5.1 6.8 15.0 6.8 6.4 15.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 IMUP PF15761.5 ORF55535 - 0.044 14.5 7.0 0.077 13.7 7.0 1.3 1 0 0 1 1 1 0 Immortalisation up-regulated protein FAM104 PF15434.6 ORF55535 - 0.086 13.4 1.9 0.15 12.7 1.9 1.3 1 0 0 1 1 1 0 Family 104 SR-25 PF10500.9 ORF55535 - 1.7 8.2 6.7 2.5 7.6 6.7 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein AF-4 PF05110.13 ORF55535 - 2.5 6.1 10.5 3.2 5.7 10.5 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF2919 PF11143.8 ORF545 - 0.001 19.4 0.8 0.0016 18.8 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2919) GDH_N PF12466.8 ORF54117 - 0.12 12.6 0.1 0.24 11.6 0.1 1.5 1 0 0 1 1 1 0 Glutamate dehydrogenase N terminal Fer4_22 PF17179.4 ORF54101 - 0.23 12.4 0.2 0.23 12.4 0.2 1.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain Helicase_C PF00271.31 ORF53770 - 7e-27 94.0 0.1 3.2e-26 91.9 0.0 2.1 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF53770 - 1.2e-11 44.7 0.0 3.4e-10 40.0 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase NUC130_3NT PF08158.12 ORF53770 - 0.15 12.4 0.1 0.46 10.8 0.0 1.8 2 0 0 2 2 2 0 NUC130/3NT domain zf-RING_2 PF13639.6 ORF51823 - 2e-13 50.4 4.9 2e-13 50.4 4.9 3.1 3 2 1 4 4 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF51823 - 5.8e-10 38.9 5.2 5.8e-10 38.9 5.2 3.1 4 0 0 4 4 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF51823 - 3.1e-09 36.4 1.6 3.1e-09 36.4 1.6 1.9 2 0 0 2 2 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF51823 - 6.9e-08 32.3 17.9 1.1e-07 31.6 3.3 4.1 4 1 0 4 4 4 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF51823 - 8.5e-08 31.9 2.3 8.5e-08 31.9 2.3 3.8 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF51823 - 4.5e-07 30.1 4.2 4.5e-07 30.1 4.2 3.0 3 0 0 3 3 3 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF51823 - 1.4e-06 28.1 3.2 1.4e-06 28.1 3.2 3.1 4 1 0 4 4 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF51823 - 2.7e-06 27.3 0.5 2.7e-06 27.3 0.5 3.7 3 2 2 5 5 5 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF51823 - 0.00028 20.7 3.7 0.00028 20.7 3.7 3.0 3 1 0 3 3 2 1 Prokaryotic RING finger family 4 DZR PF12773.7 ORF51823 - 0.0018 18.3 16.2 0.14 12.2 0.6 3.9 3 1 0 3 3 3 2 Double zinc ribbon Zn_ribbon_17 PF17120.5 ORF51823 - 0.002 17.7 3.8 0.002 17.7 3.8 2.6 3 0 0 3 3 3 1 Zinc-ribbon, C4HC2 type Nudix_N_2 PF14803.6 ORF51823 - 0.005 16.7 15.0 0.032 14.1 2.4 4.0 4 0 0 4 4 4 2 Nudix N-terminal RINGv PF12906.7 ORF51823 - 0.039 14.1 4.1 0.16 12.1 4.0 2.1 1 1 0 1 1 1 0 RING-variant domain DpnI PF06044.12 ORF51823 - 0.068 12.8 3.1 0.45 10.1 0.0 2.6 3 0 0 3 3 3 0 Dam-replacing family zinc_ribbon_12 PF11331.8 ORF51823 - 0.14 12.0 0.3 0.14 12.0 0.3 2.9 2 1 0 2 2 2 0 Probable zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF51823 - 0.35 10.3 16.1 7.2 6.2 0.1 5.1 5 0 0 5 5 5 0 zinc-ribbon domain zf-ANAPC11 PF12861.7 ORF51823 - 0.35 10.9 8.6 0.062 13.4 3.4 2.5 3 1 0 3 3 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Rad50_zn_hook PF04423.14 ORF51823 - 0.45 10.4 0.1 0.45 10.4 0.1 2.6 3 0 0 3 3 3 0 Rad50 zinc hook motif zinc_ribbon_4 PF13717.6 ORF51823 - 0.87 9.6 15.8 1.3 9.0 2.7 3.9 3 2 0 3 3 3 0 zinc-ribbon domain DiS_P_DiS PF06750.13 ORF51823 - 3.6 7.8 9.8 3 8.0 0.1 3.6 3 1 1 4 4 3 0 Bacterial Peptidase A24 N-terminal domain Elf1 PF05129.13 ORF51823 - 4.1 7.5 12.9 0.7 10.0 0.4 3.9 4 2 0 4 4 4 0 Transcription elongation factor Elf1 like DNA_ligase_ZBD PF03119.16 ORF51823 - 4.5 7.4 9.5 4.4 7.4 0.6 3.2 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Mu-like_Com PF10122.9 ORF51823 - 6.1 6.4 11.9 1.5 8.3 0.4 4.2 3 1 1 4 4 4 0 Mu-like prophage protein Com zf-CHY PF05495.12 ORF51823 - 7.1 7.2 11.5 0.72 10.4 1.0 3.4 3 1 0 3 3 3 0 CHY zinc finger Zn-ribbon_8 PF09723.10 ORF51823 - 8.7 6.5 19.7 6.9 6.9 1.6 4.9 4 1 2 6 6 5 0 Zinc ribbon domain zf-RING_4 PF14570.6 ORF51823 - 8.9 6.2 16.6 0.23 11.3 4.4 3.3 4 0 0 4 4 4 0 RING/Ubox like zinc-binding domain p450 PF00067.22 ORF5153 - 3.3e-48 164.6 0.0 4.1e-48 164.3 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 7TMR-HDED PF07697.11 ORF5153 - 0.1 12.7 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 7TM-HD extracellular Coa1 PF08695.10 ORF5153 - 0.13 12.0 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 Dynein_attach_N PF15867.5 ORF49841 - 5.4e-17 61.5 0.3 5.4e-17 61.5 0.3 2.0 2 0 0 2 2 2 1 Dynein attachment factor N-terminus RPAP3_C PF13877.6 ORF49841 - 5.4e-05 23.7 0.0 0.00011 22.7 0.0 1.6 1 0 0 1 1 1 1 Potential Monad-binding region of RPAP3 SelB-wing_2 PF09106.11 ORF49841 - 0.0099 16.1 0.1 0.048 13.9 0.2 2.2 2 0 0 2 2 2 1 Elongation factor SelB, winged helix Hep_59 PF07052.11 ORF45867 - 0.13 13.0 0.6 0.27 12.0 0.1 1.8 2 0 0 2 2 2 0 Hepatocellular carcinoma-associated antigen 59 Exo_endo_phos PF03372.23 ORF38779 - 1.7e-05 24.4 0.0 4.4e-05 23.1 0.0 1.7 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family PPR PF01535.20 ORF37367 - 0.00031 20.8 0.3 2.6 8.5 0.1 3.8 4 0 0 4 4 4 2 PPR repeat PPR_2 PF13041.6 ORF37367 - 0.00058 20.0 0.0 0.62 10.3 0.0 3.2 3 0 0 3 3 3 2 PPR repeat family PPR_3 PF13812.6 ORF37367 - 0.0034 17.4 0.0 0.011 15.8 0.0 1.8 1 1 0 1 1 1 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF37367 - 0.14 11.9 0.4 43 3.9 0.0 3.3 3 0 0 3 3 3 0 PPR repeat Albumin_I PF08027.11 ORF37139 - 0.021 14.4 1.8 6 6.6 0.6 3.1 2 0 0 2 2 2 0 Albumin I chain b FAM110_N PF14161.6 ORF37139 - 0.11 12.7 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 Centrosome-associated N terminus 3HCDH_N PF02737.18 ORF37131 - 5.1e-50 169.9 1.2 6.3e-50 169.5 1.2 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 ORF37131 - 4.7e-33 113.7 0.0 1.7e-32 111.8 0.0 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GGA_N-GAT PF18308.1 ORF37131 - 0.035 13.7 0.0 0.062 12.9 0.0 1.4 1 0 0 1 1 1 0 GGA N-GAT domain SbcCD_C PF13558.6 ORF35315 - 4.1e-16 59.0 0.6 4.1e-16 59.0 0.6 1.8 2 0 0 2 2 2 1 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF35315 - 4.4e-05 23.0 4.0 9.5e-05 21.9 4.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Fib_alpha PF08702.10 ORF35315 - 0.29 11.3 19.9 1.1 9.4 19.4 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 ORF35315 - 0.87 9.1 11.7 1.3 8.5 11.7 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit Phage_GPO PF05929.11 ORF35315 - 1.1 8.8 10.9 1.9 8.1 10.9 1.4 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase ALMT PF11744.8 ORF35315 - 1.7 7.3 5.1 1.9 7.3 5.1 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter PIN_8 PF18476.1 ORF35315 - 2.2 8.1 8.5 3.9 7.3 8.5 1.3 1 0 0 1 1 1 0 PIN like domain FUSC PF04632.12 ORF35315 - 2.5 6.5 9.1 3.1 6.2 9.1 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family TFIIA PF03153.13 ORF35315 - 3.4 7.6 15.8 4.5 7.2 15.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF1054 PF06335.12 ORF35315 - 5.8 6.8 8.3 12 5.8 8.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Spc7 PF08317.11 ORF35315 - 7.4 5.3 17.4 11 4.8 17.4 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF3958 PF13125.6 ORF35315 - 9.2 6.5 20.2 7.5 6.8 3.8 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3958) Thioredoxin PF00085.20 ORF34035 - 1.6e-13 50.5 1.1 7.5e-08 32.3 0.2 2.3 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF34035 - 9.7e-08 32.1 6.0 8.2e-05 22.6 0.1 2.7 1 1 2 3 3 3 3 Thioredoxin-like domain MFS_1_like PF12832.7 ORF31797 - 2.6e-31 108.8 16.2 3.2e-31 108.5 16.2 1.1 1 0 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 ORF31797 - 1.2e-05 24.4 30.6 0.0026 16.7 2.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 ORF31797 - 0.011 14.5 7.3 0.016 14.0 7.3 1.3 1 0 0 1 1 1 0 LacY proton/sugar symporter Ricin_B_lectin PF00652.22 ORF269 - 1.5e-12 47.8 0.0 2.2e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain Glyco_transf_7C PF02709.14 ORF269 - 5.7e-08 32.3 0.5 1e-07 31.5 0.5 1.4 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase CDtoxinA PF03498.14 ORF269 - 0.0068 16.0 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 Cytolethal distending toxin A/C domain Glyco_tranf_2_3 PF13641.6 ORF269 - 0.024 14.5 0.0 0.034 14.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 Lipoprotein_7 PF01540.16 ORF24858 - 0.021 14.1 2.9 0.037 13.3 2.9 1.4 1 0 0 1 1 1 0 Adhesin lipoprotein DUF4200 PF13863.6 ORF24858 - 0.035 14.5 6.7 0.071 13.5 6.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) Tropomyosin_1 PF12718.7 ORF24858 - 0.048 13.8 4.7 0.075 13.2 4.7 1.3 1 0 0 1 1 1 0 Tropomyosin like DUF1664 PF07889.12 ORF24858 - 0.099 12.7 2.4 0.27 11.3 2.4 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 ORF24858 - 0.19 11.8 3.8 0.13 12.3 2.1 1.7 2 0 0 2 2 2 0 Laminin Domain II DUF725 PF05267.12 ORF24858 - 0.58 10.1 11.7 0.041 13.9 3.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF725) EF-hand_7 PF13499.6 ORF2475 - 1.4e-07 31.9 1.8 0.00023 21.5 0.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF2475 - 5.9e-06 25.5 0.9 0.31 10.7 0.0 3.6 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF2475 - 0.00035 20.3 0.6 0.071 13.1 0.0 3.1 3 0 0 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF2475 - 0.00069 19.4 0.3 3.3 7.6 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain pair Pkinase PF00069.25 ORF2475 - 0.0041 16.5 0.0 0.0071 15.7 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain DUF999 PF06198.11 ORF2475 - 0.16 12.0 0.0 2.4 8.2 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF999) Peptidase_S11 PF00768.20 ORF23036 - 5.7e-17 62.0 0.0 4.4e-14 52.5 0.0 2.3 2 0 0 2 2 2 2 D-alanyl-D-alanine carboxypeptidase Peptidase_C26 PF07722.13 ORF22717 - 5.6e-21 75.3 0.0 1.3e-20 74.1 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF22717 - 2.3e-11 43.8 0.0 5.6e-11 42.5 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I BAR_3_WASP_bdg PF10456.9 ORF22717 - 0.029 13.8 0.1 0.047 13.2 0.1 1.3 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein KH_1 PF00013.29 ORF2116 - 0.011 15.6 1.3 0.02 14.7 0.4 1.9 2 0 0 2 2 2 0 KH domain DUF1295 PF06966.12 ORF1992 - 5.9e-54 183.1 3.2 7.7e-54 182.7 3.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF1992 - 1.3e-05 25.2 0.2 4.5e-05 23.5 0.2 1.9 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF1992 - 0.00032 21.1 0.2 0.032 14.6 0.0 2.8 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF1992 - 0.011 16.1 0.0 0.011 16.1 0.0 2.3 3 0 0 3 3 3 0 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF1992 - 0.056 12.2 0.2 0.1 11.3 0.2 1.4 1 0 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family DUF1295 PF06966.12 ORF18202 - 5.9e-54 183.1 3.2 7.7e-54 182.7 3.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF18202 - 1.3e-05 25.2 0.2 4.5e-05 23.5 0.2 1.9 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF18202 - 0.00032 21.1 0.2 0.032 14.6 0.0 2.8 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF18202 - 0.011 16.1 0.0 0.011 16.1 0.0 2.3 3 0 0 3 3 3 0 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF18202 - 0.056 12.2 0.2 0.1 11.3 0.2 1.4 1 0 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family CCDC53 PF10152.9 ORF14458 - 0.00022 21.7 28.5 6 7.3 28.4 3.6 1 1 0 1 1 1 1 Subunit CCDC53 of WASH complex NBP1 PF08537.10 ORF14458 - 0.049 13.1 0.0 0.064 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 Voltage_CLC PF00654.20 ORF13939 - 4.3 6.5 12.3 1.3 8.2 8.8 1.8 1 1 1 2 2 2 0 Voltage gated chloride channel Choline_kinase PF01633.20 ORF13812 - 3.8e-17 62.6 6.1 5.6e-17 62.1 6.1 1.3 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 ORF13812 - 0.0002 21.4 0.0 0.00025 21.1 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Alg6_Alg8 PF03155.15 ORF13343 - 0.0082 15.2 2.8 0.011 14.7 2.8 1.1 1 0 0 1 1 1 1 ALG6, ALG8 glycosyltransferase family DUF2776 PF10951.8 ORF13343 - 0.011 15.0 0.1 0.013 14.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) DUF3290 PF11694.8 ORF13343 - 0.039 13.9 0.7 0.062 13.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) E1-E2_ATPase PF00122.20 ORF13343 - 0.046 13.2 0.1 0.077 12.5 0.1 1.3 1 0 0 1 1 1 0 E1-E2 ATPase EbsA PF17255.2 ORF13343 - 0.11 12.9 0.1 0.16 12.3 0.1 1.3 1 0 0 1 1 1 0 EbsA-like protein Peptidase_S21 PF00716.17 ORF13343 - 0.18 11.5 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 Assemblin (Peptidase family S21) Ninjurin PF04923.12 ORF13343 - 0.23 11.4 1.7 0.6 10.1 1.7 1.6 1 1 0 1 1 1 0 Ninjurin Popeye PF04831.13 ORF13343 - 0.27 11.4 1.7 0.54 10.4 1.7 1.4 1 0 0 1 1 1 0 Popeye protein conserved region Peptidase_S11 PF00768.20 ORF1084 - 5.7e-17 62.0 0.0 4.4e-14 52.5 0.0 2.3 2 0 0 2 2 2 2 D-alanyl-D-alanine carboxypeptidase DAGK_cat PF00781.24 ORF106097 - 6.9e-07 28.9 0.0 1.1e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain KH_1 PF00013.29 ORF10467 - 0.01 15.6 1.4 0.02 14.7 0.4 1.9 2 0 0 2 2 2 0 KH domain Presenilin PF01080.17 ORF10467 - 7.5 5.2 6.2 9 4.9 6.2 1.2 1 0 0 1 1 1 0 Presenilin PP2C PF00481.21 ORF103167 - 8.3e-26 91.2 0.0 1.1e-25 90.8 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF103167 - 7e-06 25.8 0.1 3.8e-05 23.4 0.1 1.9 1 1 0 1 1 1 1 Protein phosphatase 2C Peptidase_C26 PF07722.13 ORF101712 - 3.2e-21 76.1 0.0 7.5e-21 74.9 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF101712 - 1.2e-11 44.7 0.0 2.8e-11 43.5 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I BAR_3_WASP_bdg PF10456.9 ORF101712 - 0.023 14.2 0.1 0.047 13.2 0.1 1.5 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein AMP-binding PF00501.28 NODE_25829_length_820_cov_2.238217_g20174_i0reverse_frame_1 - 6.3e-50 170.0 0.0 7.1e-50 169.8 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme Asp_protease_2 PF13650.6 NODE_25829_length_820_cov_2.238217_g20174_i0reverse_frame_1 - 0.1 13.3 0.0 0.27 11.9 0.0 1.7 1 0 0 1 1 1 0 Aspartyl protease DUF5579 PF17742.1 NODE_25826_length_820_cov_11.261146_g20172_i0forward_frame_1 - 0.19 11.3 0.4 0.29 10.7 0.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5579) AzlD PF05437.12 NODE_25772_length_821_cov_102.890585_g20126_i0forward_frame_1 - 0.043 14.0 0.1 0.072 13.3 0.1 1.3 1 0 0 1 1 1 0 Branched-chain amino acid transport protein (AzlD) zf-H3C2 PF16721.5 NODE_25740_length_822_cov_3.761118_g20100_i0reverse_frame_1 - 0.14 12.5 2.2 1.2 9.6 0.7 2.3 2 0 0 2 2 2 0 Zinc-finger like, probable DNA-binding Atg14 PF10186.9 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.016 14.3 37.9 0.012 14.7 19.6 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3552 PF12072.8 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.021 14.3 40.5 0.062 12.7 17.7 3.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) FlaC_arch PF05377.11 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.052 13.9 1.3 0.052 13.9 1.3 5.2 3 1 3 6 6 6 0 Flagella accessory protein C (FlaC) FAM76 PF16046.5 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.088 12.2 33.5 0.21 10.9 6.2 3.0 1 1 2 3 3 3 0 FAM76 protein TolA_bind_tri PF16331.5 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.15 12.1 19.5 4.2 7.5 5.1 3.7 1 1 2 3 3 3 0 TolA binding protein trimerisation DUF5082 PF16888.5 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.21 11.9 31.9 0.18 12.1 3.0 4.1 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) TRAF_BIRC3_bd PF16673.5 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.22 11.3 13.7 0.28 11.0 2.6 3.0 1 1 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain HemX PF04375.14 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.25 10.6 31.5 0.066 12.5 8.2 3.0 1 1 2 3 3 3 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF966 PF06136.13 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.3 10.8 14.2 0.44 10.2 14.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Spc7 PF08317.11 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.46 9.3 39.8 0.79 8.5 13.5 2.4 1 1 1 2 2 2 0 Spc7 kinetochore protein FUSC PF04632.12 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.55 8.7 0.8 0.7 8.4 0.8 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family HrpB7 PF09486.10 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.57 10.6 22.9 2.2 8.7 5.5 3.3 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) DUF4200 PF13863.6 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.76 10.2 38.4 4.9 7.6 9.1 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4200) Tropomyosin PF00261.20 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 0.95 8.8 36.3 1.4 8.2 36.3 1.2 1 0 0 1 1 1 0 Tropomyosin DUF16 PF01519.16 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 1 9.9 34.5 0.2 12.2 10.8 3.9 1 1 3 4 4 4 0 Protein of unknown function DUF16 ATG16 PF08614.11 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 2 8.6 35.5 0.75 10.0 21.3 2.8 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) DUF5339 PF17274.2 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 2.5 9.0 11.9 1.6 9.7 2.9 3.2 1 1 1 3 3 3 0 Family of unknown function (DUF5339) MCC-bdg_PDZ PF10506.9 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 3.1 7.9 12.2 7.8 6.6 3.7 3.1 1 1 2 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF4407 PF14362.6 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 3.4 6.9 30.5 0.68 9.2 18.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) kleA_kleC PF17383.2 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 4 7.8 10.4 0.78 10.1 2.4 3.2 1 1 2 3 3 3 0 Uncharacterized KorC regulated protein A Fez1 PF06818.15 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 5.1 7.5 34.9 7 7.0 21.8 2.4 1 1 1 2 2 2 0 Fez1 UPF0242 PF06785.11 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 5.3 7.1 42.4 0.43 10.7 6.1 3.1 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus EDR1 PF14381.6 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 6.1 6.5 8.4 7.7 6.2 7.8 1.5 1 1 0 1 1 1 0 Ethylene-responsive protein kinase Le-CTR1 SpecificRecomb PF10136.9 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 9.5 4.4 7.2 12 4.0 7.2 1.2 1 0 0 1 1 1 0 Site-specific recombinase TMF_DNA_bd PF12329.8 NODE_25692_length_823_cov_90.497462_g5866_i3reverse_frame_3 - 9.5 6.3 51.1 0.16 12.0 12.2 4.6 1 1 3 4 4 4 0 TATA element modulatory factor 1 DNA binding Mannitol_dh PF01232.23 NODE_25642_length_824_cov_3.035488_g20033_i0forward_frame_3 - 3.3e-54 183.1 0.0 4.4e-54 182.7 0.0 1.1 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain Mannitol_dh_C PF08125.13 NODE_25642_length_824_cov_3.035488_g20033_i0forward_frame_3 - 8.3e-09 35.3 0.0 1.4e-08 34.5 0.0 1.4 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain PP2C PF00481.21 NODE_25633_length_824_cov_77.278834_g20024_i0forward_frame_3 - 1.7e-23 83.6 0.0 2.4e-23 83.1 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C RAP PF08373.10 NODE_25628_length_824_cov_112.583016_g20020_i0reverse_frame_3 - 6.3e-18 64.6 0.0 1e-17 63.9 0.0 1.3 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 NODE_25628_length_824_cov_112.583016_g20020_i0reverse_frame_3 - 0.03 14.5 0.0 0.075 13.2 0.0 1.6 1 0 0 1 1 1 0 REase_MTES_1575 Spore_III_AF PF09581.10 NODE_25615_length_824_cov_574.738910_g20008_i0reverse_frame_3 - 0.2 11.7 0.6 0.31 11.0 0.6 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Asp PF00026.23 NODE_25610_length_824_cov_926.548796_g6000_i3forward_frame_2 - 4.1e-24 85.6 3.8 5.3e-24 85.2 3.8 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_25610_length_824_cov_926.548796_g6000_i3forward_frame_2 - 1.3e-06 28.8 0.7 3.4e-06 27.4 0.2 1.8 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal Radical_SAM PF04055.21 NODE_25604_length_825_cov_3.515190_g20001_i0forward_frame_2 - 5e-19 69.3 0.1 1.3e-18 67.9 0.1 1.7 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 NODE_25604_length_825_cov_3.515190_g20001_i0forward_frame_2 - 0.00072 19.7 0.0 0.0016 18.5 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Ribosomal_S3_C PF00189.20 NODE_25572_length_825_cov_2058.922785_g19972_i0forward_frame_2 - 1.1e-17 64.3 4.7 1.5e-17 63.8 1.5 2.2 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain Tcf25 PF04910.14 NODE_25571_length_825_cov_2094.189873_g19971_i0reverse_frame_2 - 0.037 13.1 0.1 0.054 12.6 0.1 1.2 1 0 0 1 1 1 0 Transcriptional repressor TCF25 p450 PF00067.22 ORF988 - 0.0011 17.8 0.3 0.0013 17.6 0.3 1.2 1 0 0 1 1 1 1 Cytochrome P450 AKAP95 PF04988.12 ORF988 - 0.0016 18.7 0.5 0.11 12.8 0.0 2.5 2 0 0 2 2 2 2 A-kinase anchoring protein 95 (AKAP95) DUF5075 PF16825.5 ORF98701 - 0.14 11.9 1.0 0.43 10.3 0.3 2.0 2 0 0 2 2 2 0 IGP family C-type lectin domain CBS PF00571.28 ORF98481 - 0.00064 20.1 0.1 0.0022 18.4 0.1 1.9 2 0 0 2 2 2 1 CBS domain 2OG-FeII_Oxy_2 PF13532.6 ORF96466 - 5.4e-13 49.6 0.0 5.8e-11 42.9 0.0 2.2 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF96466 - 0.084 13.4 0.0 0.19 12.3 0.0 1.7 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily GLTP PF08718.11 ORF93523 - 0.22 11.8 2.0 0.25 11.6 0.2 1.9 2 1 0 2 2 2 0 Glycolipid transfer protein (GLTP) Spore_III_AE PF09546.10 ORF93523 - 0.29 10.3 0.5 0.62 9.2 0.3 1.7 1 1 1 2 2 2 0 Stage III sporulation protein AE (spore_III_AE) EcsC PF12787.7 ORF93523 - 7.6 6.1 7.5 14 5.3 1.2 3.4 1 1 1 2 2 2 0 EcsC protein family HRDC PF00570.23 ORF88405 - 0.028 14.4 0.1 0.071 13.1 0.1 1.7 1 0 0 1 1 1 0 HRDC domain Methuselah_N PF06652.12 ORF88405 - 0.12 12.3 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Methuselah N-terminus Metallophos PF00149.28 ORF84738 - 6.4e-17 62.7 0.0 1.5e-16 61.5 0.0 1.6 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase CclA_1 PF16942.5 ORF82985 - 0.21 11.9 3.0 0.41 10.9 3.0 1.5 1 0 0 1 1 1 0 Putative cyclic bacteriocin CclA_1 PF16942.5 ORF81694 - 0.21 11.9 3.0 0.41 10.9 3.0 1.5 1 0 0 1 1 1 0 Putative cyclic bacteriocin DDRGK PF09756.9 ORF79032 - 0.77 9.3 9.7 1.2 8.7 9.7 1.3 1 0 0 1 1 1 0 DDRGK domain DBD_HTH PF18430.1 ORF79032 - 9 6.2 8.0 0.86 9.4 1.6 2.6 2 1 1 3 3 3 0 Putative DNA-binding domain JIP_LZII PF16471.5 ORF75570 - 0.1 12.8 25.2 0.2 11.9 4.9 3.7 3 1 1 4 4 4 0 JNK-interacting protein leucine zipper II Mod_r PF07200.13 ORF75570 - 0.11 12.5 21.1 0.52 10.4 6.2 2.3 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein bZIP_1 PF00170.21 ORF75570 - 0.14 12.3 34.9 0.21 11.7 0.8 4.3 4 0 0 4 4 4 0 bZIP transcription factor ZapB PF06005.12 ORF75570 - 0.18 12.3 31.4 0.25 11.8 9.3 3.5 3 0 0 3 3 3 0 Cell division protein ZapB Shugoshin_N PF07558.11 ORF75570 - 0.46 10.4 11.5 0.34 10.8 1.0 3.6 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region LMBR1 PF04791.16 ORF75570 - 0.94 8.3 12.9 1.3 7.8 12.9 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein HAUS-augmin3 PF14932.6 ORF75570 - 2.6 7.6 22.6 0.58 9.7 3.0 2.5 2 1 0 2 2 2 0 HAUS augmin-like complex subunit 3 TSC22 PF01166.18 ORF75570 - 3 8.2 15.6 4 7.8 1.7 4.0 3 2 1 4 4 4 0 TSC-22/dip/bun family DUF2935 PF11155.8 ORF75570 - 3.4 8.0 9.3 4.2 7.7 2.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) TMF_DNA_bd PF12329.8 ORF75570 - 9.1 6.4 46.6 0.2 11.7 1.6 4.3 3 1 0 4 4 4 0 TATA element modulatory factor 1 DNA binding MMR_HSR1_Xtn PF16897.5 ORF750 - 0.027 14.5 1.9 0.071 13.1 0.2 2.4 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain CclA_1 PF16942.5 ORF74368 - 0.21 11.9 3.0 0.41 10.9 3.0 1.5 1 0 0 1 1 1 0 Putative cyclic bacteriocin KleE PF17394.2 ORF72483 - 0.092 13.0 2.9 1.3 9.2 1.0 2.3 2 0 0 2 2 2 0 Uncharacterized KleE stable inheritance protein PMSR PF01625.21 ORF71407 - 3e-61 206.1 2.6 3.7e-61 205.8 2.6 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Methyltr_RsmB-F PF01189.17 ORF62788 - 3.5e-47 160.7 0.2 5.7e-47 160.0 0.0 1.4 2 0 0 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 ORF62788 - 1.8e-09 38.0 0.0 9.8e-09 35.6 0.0 2.0 2 0 0 2 2 2 1 N-terminal domain of 16S rRNA methyltransferase RsmF FtsJ PF01728.19 ORF62788 - 0.0043 17.2 0.0 0.0076 16.4 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 ORF62788 - 0.0047 16.7 0.0 0.007 16.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF62788 - 0.0065 17.1 0.0 0.013 16.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF62788 - 0.048 13.4 0.0 0.077 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Gly_radical PF01228.21 ORF62788 - 0.081 13.5 0.1 0.3 11.6 0.1 1.8 2 0 0 2 2 2 0 Glycine radical DUF938 PF06080.12 ORF62788 - 0.1 12.4 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Ubie_methyltran PF01209.18 ORF62788 - 0.11 11.8 0.0 0.22 10.8 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family DUF2768 PF10966.8 ORF59004 - 0.067 13.6 0.9 0.067 13.6 0.9 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2768) Dickkopf_N PF04706.12 ORF58201 - 2.4e-06 27.9 13.3 2.4e-06 27.9 13.3 3.6 4 0 0 4 4 4 1 Dickkopf N-terminal cysteine-rich region MLTR_LBD PF17765.1 ORF57863 - 0.0054 16.9 1.1 0.0054 16.9 1.1 1.8 1 1 1 2 2 2 1 MmyB-like transcription regulator ligand binding domain Glyco_transf_34 PF05637.12 ORF54746 - 3.4e-06 27.0 0.0 1.1e-05 25.3 0.0 1.9 1 1 0 1 1 1 1 galactosyl transferase GMA12/MNN10 family Nucleotid_trans PF03407.16 ORF54746 - 7.6e-05 22.8 0.0 0.00013 22.1 0.0 1.5 1 1 0 1 1 1 1 Nucleotide-diphospho-sugar transferase ATP_bind_1 PF03029.17 ORF54746 - 0.22 11.3 0.1 0.86 9.3 0.0 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein JIP_LZII PF16471.5 ORF54006 - 0.1 12.8 25.2 0.2 11.9 4.9 3.7 3 1 1 4 4 4 0 JNK-interacting protein leucine zipper II Mod_r PF07200.13 ORF54006 - 0.11 12.5 21.1 0.52 10.4 6.2 2.3 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein bZIP_1 PF00170.21 ORF54006 - 0.14 12.3 34.9 0.21 11.7 0.8 4.3 4 0 0 4 4 4 0 bZIP transcription factor ZapB PF06005.12 ORF54006 - 0.18 12.3 31.4 0.25 11.8 9.3 3.5 3 0 0 3 3 3 0 Cell division protein ZapB Shugoshin_N PF07558.11 ORF54006 - 0.46 10.4 11.5 0.34 10.8 1.0 3.6 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region LMBR1 PF04791.16 ORF54006 - 0.94 8.3 12.9 1.3 7.8 12.9 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein HAUS-augmin3 PF14932.6 ORF54006 - 2.6 7.6 22.6 0.58 9.7 3.0 2.5 2 1 0 2 2 2 0 HAUS augmin-like complex subunit 3 TSC22 PF01166.18 ORF54006 - 3 8.2 15.6 4 7.8 1.7 4.0 3 2 1 4 4 4 0 TSC-22/dip/bun family DUF2935 PF11155.8 ORF54006 - 3.4 8.0 9.3 4.2 7.7 2.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) TMF_DNA_bd PF12329.8 ORF54006 - 9.1 6.4 46.6 0.2 11.7 1.6 4.3 3 1 0 4 4 4 0 TATA element modulatory factor 1 DNA binding DUF2196 PF09962.9 ORF52370 - 0.1 12.6 0.4 0.2 11.6 0.4 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2196) DUF908 PF06012.12 ORF50444 - 0.31 10.4 5.2 0.56 9.6 5.2 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) Tim54 PF11711.8 ORF50444 - 1.2 7.9 8.4 1.8 7.2 8.4 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Pro_isomerase PF00160.21 ORF48341 - 7e-45 153.1 0.2 8.5e-45 152.9 0.2 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FKBP_C PF00254.28 ORF48341 - 2.3e-05 24.7 0.0 6e-05 23.3 0.0 1.8 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Not1 PF04054.15 ORF44851 - 2.3e-37 128.8 0.6 3.2e-37 128.3 0.6 1.1 1 0 0 1 1 1 1 CCR4-Not complex component, Not1 Peptidase_M3 PF01432.20 ORF41881 - 7.6e-16 58.4 0.0 8.6e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 GPAT_N PF14829.6 ORF41304 - 0.077 13.0 1.2 0.14 12.1 0.1 1.9 2 0 0 2 2 2 0 Glycerol-3-phosphate acyltransferase N-terminal Y2_Tnp PF04986.13 ORF41304 - 0.11 12.5 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Putative transposase PIEZO PF15917.5 ORF41304 - 3.9 6.9 5.5 1.4 8.3 2.9 1.5 1 1 0 1 1 1 0 Piezo CclA_1 PF16942.5 ORF40568 - 0.21 11.9 3.0 0.41 10.9 3.0 1.5 1 0 0 1 1 1 0 Putative cyclic bacteriocin CclA_1 PF16942.5 ORF40101 - 0.21 11.9 3.0 0.41 10.9 3.0 1.5 1 0 0 1 1 1 0 Putative cyclic bacteriocin Helicase_C PF00271.31 ORF3843 - 8e-22 77.7 0.0 1.4e-21 76.9 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain AMP-binding PF00501.28 ORF38159 - 2.2e-39 135.3 0.5 2.5e-39 135.1 0.5 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF38159 - 3.9e-14 53.4 0.0 7.7e-14 52.4 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ScsC_N PF18312.1 ORF38159 - 0.11 12.3 0.2 0.26 11.1 0.2 1.6 1 0 0 1 1 1 0 Copper resistance protein ScsC N-terminal domain Pkinase PF00069.25 ORF37251 - 2.5e-48 164.7 0.0 3.1e-48 164.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF37251 - 7.7e-36 123.7 0.0 9.5e-36 123.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF37251 - 0.00034 19.5 0.0 0.00048 19.0 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Peptidase_M18 PF02127.15 ORF35680 - 1.8e-71 241.2 0.0 2.2e-71 240.9 0.0 1.0 1 0 0 1 1 1 1 Aminopeptidase I zinc metalloprotease (M18) Sushi_2 PF09014.10 ORF35680 - 0.042 13.8 0.9 0.081 12.8 0.9 1.5 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain IBR PF01485.21 ORF3294 - 0.022 15.0 2.5 0.022 15.0 2.5 4.4 3 1 1 4 4 4 0 IBR domain, a half RING-finger domain DUF3139 PF11337.8 ORF32576 - 0.11 13.1 0.8 0.11 13.1 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) PS_Dcarbxylase PF02666.15 ORF28925 - 8.2e-60 201.8 0.0 9.6e-60 201.6 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase CclA_1 PF16942.5 ORF23809 - 0.21 11.9 3.0 0.41 10.9 3.0 1.5 1 0 0 1 1 1 0 Putative cyclic bacteriocin THDPS_N_2 PF14805.6 ORF23198 - 4e-26 91.0 0.9 6.4e-26 90.4 0.9 1.3 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal Hexapep_2 PF14602.6 ORF23198 - 5.7e-13 48.4 1.5 5.7e-13 48.4 1.5 2.7 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 ORF23198 - 5.9e-12 44.8 9.4 7.5e-07 28.6 0.9 3.3 2 1 1 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Cas3_C PF18395.1 ORF23198 - 0.14 12.7 0.0 0.37 11.3 0.0 1.7 2 0 0 2 2 2 0 Cas3 C-terminal domain FtsJ PF01728.19 ORF22797 - 3.1e-37 128.4 0.0 4.2e-37 128.0 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 ORF22797 - 0.00036 20.4 0.0 0.0013 18.6 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF22797 - 0.00048 20.8 0.0 0.0009 19.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF22797 - 0.00062 19.6 0.0 0.00072 19.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF22797 - 0.027 14.2 0.0 0.052 13.3 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 ORF22797 - 0.032 13.6 0.0 0.12 11.7 0.0 1.7 1 1 0 2 2 2 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF22797 - 0.077 12.3 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Complex1_LYR PF05347.15 ORF22797 - 0.35 10.9 1.6 6.1 7.0 0.2 2.4 2 0 0 2 2 2 0 Complex 1 protein (LYR family) 7TMR-HDED PF07697.11 ORF22300 - 3.4 7.7 7.9 1.5 8.9 0.1 2.3 2 1 0 2 2 2 0 7TM-HD extracellular CclA_1 PF16942.5 ORF19093 - 0.21 11.9 3.0 0.41 10.9 3.0 1.5 1 0 0 1 1 1 0 Putative cyclic bacteriocin Peptidase_C2 PF00648.21 ORF17179 - 4.8e-32 111.2 0.3 6.3e-32 110.8 0.3 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF17179 - 1.1e-13 51.7 0.0 2.3e-13 50.6 0.0 1.5 1 1 0 1 1 1 1 Calpain large subunit, domain III TIC20 PF16166.5 ORF15 - 0.0065 16.3 3.8 0.019 14.8 3.8 1.8 1 1 0 1 1 1 1 Chloroplast import apparatus Tic20-like zf_PR_Knuckle PF18445.1 ORF15 - 0.11 12.3 1.4 0.29 11.0 1.4 1.6 1 0 0 1 1 1 0 PR zinc knuckle motif Meckelin PF09773.9 ORF13282 - 6.8e-36 123.7 0.4 7.8e-36 123.5 0.4 1.0 1 0 0 1 1 1 1 Meckelin (Transmembrane protein 67) CclA_1 PF16942.5 ORF110619 - 0.21 11.9 3.0 0.41 10.9 3.0 1.5 1 0 0 1 1 1 0 Putative cyclic bacteriocin GPAT_N PF14829.6 ORF110443 - 0.077 13.0 1.2 0.14 12.1 0.1 1.9 2 0 0 2 2 2 0 Glycerol-3-phosphate acyltransferase N-terminal Y2_Tnp PF04986.13 ORF110443 - 0.11 12.5 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Putative transposase PIEZO PF15917.5 ORF110443 - 3.9 6.9 5.5 1.4 8.3 2.9 1.5 1 1 0 1 1 1 0 Piezo PhoH PF02562.16 ORF109428 - 3.2e-96 320.7 0.0 3.9e-96 320.4 0.0 1.1 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.6 ORF109428 - 7.1e-10 38.9 0.0 1.1e-09 38.3 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF109428 - 5.9e-05 23.4 0.2 0.00024 21.5 0.2 1.9 1 1 0 1 1 1 1 AAA domain DEAD PF00270.29 ORF109428 - 0.00093 19.0 0.0 0.0042 16.9 0.0 1.8 1 1 0 2 2 2 1 DEAD/DEAH box helicase IstB_IS21 PF01695.17 ORF109428 - 0.00098 18.9 0.0 0.0036 17.0 0.0 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF109428 - 0.004 17.4 0.0 0.01 16.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF109428 - 0.0076 15.8 0.0 0.016 14.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain Zot PF05707.12 ORF109428 - 0.028 14.1 0.0 4.4 6.9 0.0 2.4 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) FecCD PF01032.18 ORF106767 - 3.4e-76 256.2 33.2 3.8e-76 256.1 33.2 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 ORF106767 - 0.0012 18.4 20.5 0.0024 17.4 20.5 1.5 1 1 0 1 1 1 1 ABC 3 transport family OsmC PF02566.19 ORF106767 - 1.1 9.7 3.9 6.7 7.3 0.1 2.7 2 0 0 2 2 2 0 OsmC-like protein DUF4574 PF15141.6 ORF106767 - 4.5 7.3 6.2 14 5.7 1.0 2.9 2 1 1 3 3 3 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 DDE_1 PF03184.19 ORF106582 - 1.1e-11 44.7 0.0 1.5e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_3 PF13358.6 ORF106582 - 0.00049 19.9 0.2 0.01 15.6 0.0 2.4 2 1 0 2 2 2 1 DDE superfamily endonuclease Not1 PF04054.15 ORF104703 - 2.3e-37 128.8 0.6 3.2e-37 128.3 0.6 1.1 1 0 0 1 1 1 1 CCR4-Not complex component, Not1 Shisa PF13908.6 ORF104335 - 0.047 13.9 0.9 0.047 13.9 0.9 2.4 3 0 0 3 3 3 0 Wnt and FGF inhibitory regulator GPDPase_memb PF10110.9 ORF104335 - 0.19 10.5 13.3 0.065 12.0 4.0 2.1 1 1 1 2 2 2 0 Membrane domain of glycerophosphoryl diester phosphodiesterase DUF3975 PF13126.6 ORF104335 - 0.22 12.0 0.1 0.22 12.0 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3975) Ank_2 PF12796.7 ORF100593 - 7.5e-27 93.7 0.9 2.7e-14 53.5 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF100593 - 9e-17 61.2 0.0 2.5e-10 40.7 0.0 2.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF100593 - 3.2e-13 49.5 0.1 6.3e-06 26.4 0.2 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF100593 - 4.6e-12 45.0 0.0 0.00053 20.2 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF100593 - 1.6e-07 31.5 0.1 0.00016 21.9 0.3 2.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) TolA_bind_tri PF16331.5 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_1 - 0.076 13.1 0.9 0.17 12.0 0.2 1.9 2 0 0 2 2 2 0 TolA binding protein trimerisation SOGA PF11365.8 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_1 - 1.5 10.0 7.6 0.62 11.2 3.2 2.4 1 1 2 3 3 3 0 Protein SOGA Sugar_tr PF00083.24 NODE_25910_length_818_cov_2.042146_g20237_i0forward_frame_1 - 1.4e-10 40.7 10.7 2.3e-10 39.9 10.7 1.5 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_25910_length_818_cov_2.042146_g20237_i0forward_frame_1 - 1.7e-08 33.8 6.6 2.2e-08 33.4 6.6 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Tri3 PF07428.11 NODE_25907_length_818_cov_5.163474_g20234_i0forward_frame_1 - 0.15 11.0 0.0 0.21 10.5 0.0 1.1 1 0 0 1 1 1 0 15-O-acetyltransferase Tri3 Phasin_2 PF09361.10 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.043 14.1 3.1 0.11 12.8 0.1 2.7 3 1 0 3 3 3 0 Phasin protein DUF1804 PF08822.11 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.043 13.8 5.5 1.7 8.6 0.2 3.3 1 1 2 3 3 3 0 Protein of unknown function (DUF1804) MLD PF11647.8 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.071 13.4 3.8 0.98 9.8 0.7 2.8 2 0 0 2 2 2 0 Membrane Localization Domain Nup54 PF13874.6 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.072 13.2 1.0 0.072 13.2 1.0 2.3 2 1 0 3 3 3 0 Nucleoporin complex subunit 54 SRP_SPB PF02978.19 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.078 13.6 1.5 0.2 12.3 1.1 2.0 1 1 0 1 1 1 0 Signal peptide binding domain DUF1043 PF06295.12 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.13 12.3 8.6 0.12 12.3 2.3 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) AcylCoA_dehyd_C PF12186.8 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.46 10.6 8.4 0.81 9.8 2.8 3.8 1 1 1 3 3 3 0 Acyl-CoA dehydrogenase C terminal Activator-TraM PF11657.8 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 1.1 9.1 6.5 0.51 10.2 0.4 2.4 2 1 1 3 3 3 0 Transcriptional activator TraM YtxH PF12732.7 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 2.5 8.7 5.2 81 3.9 5.2 3.2 1 1 0 1 1 1 0 YtxH-like protein TOH_N PF12549.8 NODE_25806_length_820_cov_183.179618_g20156_i0reverse_frame_3 - 3.5 7.6 6.2 4.1 7.4 0.1 3.2 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal Fer4_12 PF13353.6 NODE_25806_length_820_cov_183.179618_g20156_i0reverse_frame_2 - 1.7 8.9 4.8 0.5 10.6 1.3 1.8 1 1 1 2 2 2 0 4Fe-4S single cluster domain Pyr_redox_3 PF13738.6 NODE_25805_length_820_cov_188.952866_g17562_i1forward_frame_2 - 7.8e-09 35.2 0.0 1.3e-08 34.5 0.0 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 NODE_25805_length_820_cov_188.952866_g17562_i1forward_frame_2 - 1.4e-06 27.7 0.0 2e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 NODE_25805_length_820_cov_188.952866_g17562_i1forward_frame_2 - 6.8e-05 22.2 0.0 0.00013 21.3 0.0 1.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DUF2779 PF11074.8 NODE_25777_length_821_cov_74.870229_g20131_i0forward_frame_2 - 0.021 15.3 0.9 0.35 11.3 0.9 2.4 1 1 0 1 1 1 0 Domain of unknown function(DUF2779) DUF2841 PF11001.8 NODE_25772_length_821_cov_102.890585_g20126_i0reverse_frame_3 - 0.067 13.3 0.0 0.098 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2841) Asparaginase PF00710.20 NODE_25772_length_821_cov_102.890585_g20126_i0forward_frame_3 - 4.9e-14 52.3 0.0 6.9e-14 51.8 0.0 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Cas_Csa4 PF09703.10 NODE_25740_length_822_cov_3.761118_g20100_i0forward_frame_3 - 0.024 13.9 0.3 0.035 13.4 0.3 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csa4) LRR_6 PF13516.6 NODE_25717_length_822_cov_330.088945_g20082_i0reverse_frame_3 - 0.00071 19.4 5.3 20 5.6 0.1 5.8 5 0 0 5 5 5 1 Leucine Rich repeat LRR_1 PF00560.33 NODE_25717_length_822_cov_330.088945_g20082_i0reverse_frame_3 - 0.11 13.1 1.1 6.1 7.8 0.2 3.1 2 0 0 2 2 2 0 Leucine Rich Repeat Acetyltransf_6 PF13480.7 NODE_25717_length_822_cov_330.088945_g20082_i0reverse_frame_3 - 0.81 9.8 7.0 15 5.7 0.0 2.7 2 1 1 3 3 3 0 Acetyltransferase (GNAT) domain LRR_4 PF12799.7 NODE_25717_length_822_cov_330.088945_g20082_i0reverse_frame_3 - 4 8.0 6.6 4.8 7.7 1.5 3.2 3 1 0 3 3 3 0 Leucine Rich repeats (2 copies) DnaJ PF00226.31 ORF99965 - 9.3e-23 80.1 3.2 1.5e-22 79.4 3.2 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_C PF01556.18 ORF99965 - 0.036 14.2 0.1 0.082 13.0 0.0 1.6 2 0 0 2 2 2 0 DnaJ C terminal domain LAGLIDADG_3 PF14528.6 ORF96938 - 2.5e-05 24.5 0.0 4.6e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 LAGLIDADG-like domain Thioredoxin_16 PF18569.1 ORF96938 - 0.052 13.7 0.3 0.094 12.8 0.3 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain LAGLIDADG_1 PF00961.19 ORF96938 - 0.14 13.2 0.1 0.55 11.2 0.1 2.1 1 1 0 1 1 1 0 LAGLIDADG endonuclease # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks61.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks61.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks61.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks61.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- VP_N-CPKC PF11475.8 ORF94956 - 0.031 14.2 0.8 0.1 12.5 0.8 1.9 1 0 0 1 1 1 0 Virion protein N terminal domain CDC45 PF02724.14 ORF94726 - 4.9e-09 35.1 17.9 6.7e-09 34.6 17.9 1.1 1 0 0 1 1 1 1 CDC45-like protein RNA_pol_Rpc4 PF05132.14 ORF94726 - 1.1 9.6 10.6 0.078 13.4 5.1 1.9 2 0 0 2 2 2 0 RNA polymerase III RPC4 CobT PF06213.12 ORF94726 - 4.4 6.6 20.1 0.027 13.9 11.3 1.6 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT DNA_pol_phi PF04931.13 ORF94726 - 8.7 4.3 17.9 11 4.0 17.9 1.1 1 0 0 1 1 1 0 DNA polymerase phi DUF3328 PF11807.8 ORF92078 - 0.1 12.3 1.5 0.29 10.9 1.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3328) Thioredoxin PF00085.20 ORF90084 - 0.00076 19.4 0.0 0.0015 18.5 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin SHE3 PF17078.5 ORF90084 - 0.025 14.3 0.1 0.035 13.8 0.1 1.2 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 CABIT PF12736.7 ORF90084 - 0.07 12.4 0.1 0.12 11.6 0.1 1.3 1 0 0 1 1 1 0 Cell-cycle sustaining, positive selection, CENP-F_leu_zip PF10473.9 ORF88311 - 0.0024 17.9 21.0 0.0024 17.9 21.0 4.0 1 1 1 3 3 3 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 JAKMIP_CC3 PF16034.5 ORF88311 - 0.014 15.3 12.4 0.014 15.3 12.4 3.2 1 1 2 3 3 2 0 JAKMIP CC3 domain DUF1515 PF07439.11 ORF88311 - 0.025 14.6 0.9 0.025 14.6 0.9 3.4 1 1 1 3 3 3 0 Protein of unknown function (DUF1515) TMF_TATA_bd PF12325.8 ORF88311 - 0.027 14.7 12.4 0.027 14.7 12.4 4.2 2 2 2 4 4 4 0 TATA element modulatory factor 1 TATA binding SHE3 PF17078.5 ORF88311 - 0.15 11.8 44.5 1.1 8.9 1.8 3.2 1 1 1 2 2 2 0 SWI5-dependent HO expression protein 3 MerR-DNA-bind PF09278.11 ORF88311 - 0.3 11.7 15.7 1.5 9.4 0.4 3.8 3 1 0 3 3 3 0 MerR, DNA binding EzrA PF06160.12 ORF88311 - 0.56 8.3 48.3 0.076 11.2 28.6 2.1 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA ADIP PF11559.8 ORF88311 - 0.65 10.1 58.8 2.8 8.0 8.7 4.0 1 1 2 4 4 4 0 Afadin- and alpha -actinin-Binding Spc7 PF08317.11 ORF88311 - 1.5 7.6 61.6 0.26 10.1 24.5 2.6 1 1 2 3 3 3 0 Spc7 kinetochore protein Filament PF00038.21 ORF88311 - 1.7 8.1 48.7 0.024 14.2 18.9 2.3 1 1 1 2 2 2 0 Intermediate filament protein DUF4795 PF16043.5 ORF88311 - 3.1 7.3 52.1 1 8.9 25.7 3.2 1 1 1 3 3 3 0 Domain of unknown function (DUF4795) DUF1664 PF07889.12 ORF88311 - 3.7 7.6 36.5 0.37 10.8 4.0 3.6 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) GAS PF13851.6 ORF88311 - 6.4 6.1 61.6 0.11 11.9 18.1 3.8 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding Ribosomal_L28e PF01778.17 ORF83659 - 1.4e-33 116.1 0.3 1.4e-33 116.1 0.3 1.7 2 0 0 2 2 2 1 Ribosomal L28e protein family Mak16 PF04874.14 ORF83659 - 2.2e-25 89.2 13.4 4.9e-25 88.1 13.4 1.6 1 0 0 1 1 1 1 Mak16 protein C-terminal region Med9 PF07544.13 ORF83659 - 0.12 12.5 0.4 0.12 12.5 0.4 2.2 3 0 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 Lipase_3 PF01764.25 ORF78800 - 3.7e-12 46.3 0.0 5.1e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF78800 - 0.068 13.8 1.9 0.1 13.2 1.7 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF3089 PF11288.8 ORF78800 - 0.081 12.5 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) DnaJ PF00226.31 ORF77702 - 1.7e-06 28.1 0.1 1.7e-06 28.1 0.1 1.7 2 0 0 2 2 2 1 DnaJ domain DIX PF00778.17 ORF77702 - 2.1e-06 27.4 0.0 3.8e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 DIX domain Abhydrolase_3 PF07859.13 ORF77482 - 8.5e-41 140.1 0.0 9.9e-41 139.9 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF77482 - 1.1e-15 57.4 0.0 9.1e-15 54.4 0.0 2.0 1 1 0 1 1 1 1 Steryl acetyl hydrolase RHINO PF15319.6 ORF75002 - 8.6 6.3 10.8 1.8 8.5 3.1 2.0 2 0 0 2 2 2 0 RAD9, RAD1, HUS1-interacting nuclear orphan protein EF-hand_5 PF13202.6 ORF72832 - 1.4e-12 46.5 0.4 6.3e-07 28.6 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 ORF72832 - 3e-12 45.2 0.3 1.6e-05 24.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF72832 - 1.9e-10 41.0 0.1 8.6e-10 38.9 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF72832 - 2e-10 39.7 2.4 0.00031 20.4 0.0 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF72832 - 8.2e-08 32.0 0.1 0.00044 20.1 0.0 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF72832 - 7e-06 26.3 0.0 1.2e-05 25.6 0.0 1.4 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF72832 - 0.0075 16.1 0.1 0.74 9.7 0.1 2.3 2 0 0 2 2 2 1 EF hand EF-hand_3 PF09069.11 ORF72832 - 0.03 14.7 0.0 0.079 13.4 0.0 1.7 1 0 0 1 1 1 0 EF-hand Macro PF01661.21 ORF71847 - 5.9e-31 107.0 0.1 5.9e-31 107.0 0.1 2.7 2 2 0 2 2 2 1 Macro domain PMEI PF04043.15 ORF71847 - 0.0065 16.8 0.6 0.11 12.8 0.3 2.3 2 0 0 2 2 2 1 Plant invertase/pectin methylesterase inhibitor Sigma_reg_C PF13791.6 ORF71847 - 0.011 15.9 3.6 0.024 14.8 3.6 1.5 1 0 0 1 1 1 0 Sigma factor regulator C-terminal DUF2312 PF10073.9 ORF71847 - 0.056 13.1 0.1 0.056 13.1 0.1 2.6 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) Pilt PF15453.6 ORF71847 - 0.12 11.7 1.1 0.16 11.3 1.1 1.1 1 0 0 1 1 1 0 Protein incorporated later into Tight Junctions SLATT_5 PF18160.1 ORF71847 - 0.65 9.3 6.3 1.2 8.4 6.3 1.4 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 TMPIT PF07851.13 ORF71847 - 0.98 8.6 7.4 1.5 8.0 7.4 1.3 1 0 0 1 1 1 0 TMPIT-like protein YabA PF06156.13 ORF71847 - 1 10.0 8.5 0.24 12.0 5.2 1.8 2 0 0 2 2 2 0 Initiation control protein YabA T3SSipB PF16535.5 ORF71847 - 1.3 9.5 7.3 2.1 8.8 7.3 1.4 1 1 0 1 1 1 0 Type III cell invasion protein SipB VPS9 PF02204.18 ORF64434 - 9.8e-09 35.4 1.2 9.8e-09 35.4 1.2 2.3 2 0 0 2 2 2 1 Vacuolar sorting protein 9 (VPS9) domain VPS9 PF02204.18 ORF63171 - 9.8e-09 35.4 1.2 9.8e-09 35.4 1.2 2.3 2 0 0 2 2 2 1 Vacuolar sorting protein 9 (VPS9) domain DER1 PF04511.15 ORF59705 - 0.25 11.3 5.9 0.42 10.5 5.9 1.3 1 1 0 1 1 1 0 Der1-like family DUF4059 PF13268.6 ORF59705 - 6.6 7.2 6.8 0.29 11.6 1.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4059) Aminotran_1_2 PF00155.21 ORF59274 - 1e-25 90.7 0.0 1.3e-25 90.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 ORF59274 - 0.00033 20.1 0.0 0.00054 19.3 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Glyco_hydro_20 PF00728.22 ORF59274 - 0.022 14.1 0.0 0.034 13.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, catalytic domain Cys_Met_Meta_PP PF01053.20 ORF59274 - 0.14 10.7 0.0 0.16 10.5 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme TUTF7_u4 PF16631.5 ORF58357 - 1.4 9.6 11.8 2.7 8.7 3.2 2.4 2 0 0 2 2 2 0 Unstructured region 4 on terminal uridylyltransferase 7 Kinesin PF00225.23 ORF55915 - 4.1e-67 226.5 6.8 4.6e-67 226.3 6.8 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF55915 - 0.0043 17.0 1.4 0.007 16.3 0.2 2.0 2 1 0 2 2 2 1 Microtubule binding Csd3_N PF18059.1 ORF55915 - 0.054 14.0 0.4 0.17 12.4 0.4 1.9 1 0 0 1 1 1 0 Csd3 N-terminal PAH PF02671.21 ORF55915 - 0.16 12.2 1.4 0.48 10.6 0.6 2.3 2 1 0 2 2 2 0 Paired amphipathic helix repeat CAMSAP_CKK PF08683.11 ORF55870 - 2.6e-17 63.1 0.0 3.4e-17 62.7 0.0 1.1 1 0 0 1 1 1 1 Microtubule-binding calmodulin-regulated spectrin-associated Myb_DNA-binding PF00249.31 ORF55119 - 3.9e-10 39.7 0.6 6.9e-10 39.0 0.6 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF55119 - 0.021 14.7 2.2 0.054 13.4 0.2 2.5 2 0 0 2 2 2 0 Myb DNA-binding like SEEEED PF14797.6 ORF55119 - 0.97 9.6 22.9 0.16 12.2 18.6 1.8 2 0 0 2 2 2 0 Serine-rich region of AP3B1, clathrin-adaptor complex PEX11 PF05648.14 ORF54721 - 3.9e-27 95.2 1.1 1.1e-18 67.6 0.5 2.0 1 1 1 2 2 2 2 Peroxisomal biogenesis factor 11 (PEX11) Wbp11 PF09429.10 ORF54721 - 0.094 13.1 4.9 0.53 10.7 1.3 2.4 2 0 0 2 2 2 0 WW domain binding protein 11 Phasin_2 PF09361.10 ORF54603 - 0.017 15.4 1.9 0.043 14.1 1.9 1.7 1 0 0 1 1 1 0 Phasin protein Zincin_2 PF10103.9 ORF54603 - 0.044 13.1 0.1 0.057 12.7 0.1 1.3 1 0 0 1 1 1 0 Zincin-like metallopeptidase Cullin_binding PF03556.15 ORF5419 - 4.9e-24 85.1 1.3 4.9e-24 85.1 1.3 1.7 2 0 0 2 2 2 1 Cullin binding UBA_4 PF14555.6 ORF5419 - 7.4e-06 25.7 0.0 2.1e-05 24.3 0.0 1.8 1 0 0 1 1 1 1 UBA-like domain Asp PF00026.23 ORF49726 - 4.5e-24 85.5 3.9 5.7e-24 85.1 3.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF49726 - 1.3e-06 28.8 0.7 3.3e-06 27.4 0.2 1.8 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal SRAP PF02586.14 ORF48369 - 2e-44 151.8 0.0 2e-43 148.5 0.0 2.0 2 0 0 2 2 2 1 SOS response associated peptidase (SRAP) ACOX PF01756.19 ORF47831 - 3.1e-40 137.7 0.0 4.1e-40 137.3 0.0 1.1 1 0 0 1 1 1 1 Acyl-CoA oxidase DER1 PF04511.15 ORF46459 - 0.25 11.3 5.9 0.42 10.5 5.9 1.3 1 1 0 1 1 1 0 Der1-like family DUF4059 PF13268.6 ORF46459 - 6.6 7.2 6.8 0.29 11.6 1.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4059) PPR PF01535.20 ORF44799 - 0.0003 20.8 0.3 2.6 8.5 0.1 3.8 4 0 0 4 4 4 2 PPR repeat PPR_2 PF13041.6 ORF44799 - 0.00056 20.0 0.0 0.62 10.3 0.0 3.3 3 0 0 3 3 3 2 PPR repeat family PPR_3 PF13812.6 ORF44799 - 0.0033 17.5 0.0 0.011 15.8 0.0 1.8 1 1 0 1 1 1 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF44799 - 0.13 12.0 0.4 42 4.0 0.0 3.4 3 0 0 3 3 3 0 PPR repeat TAtT PF16811.5 ORF42411 - 0.028 13.7 0.1 0.042 13.2 0.1 1.2 1 0 0 1 1 1 0 TRAP transporter T-component EF-hand_1 PF00036.32 ORF37301 - 8.3e-12 43.8 1.6 1.1e-06 27.8 0.1 2.8 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF37301 - 6.4e-11 42.5 0.3 1.1e-10 41.8 0.3 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF37301 - 1e-09 37.5 2.0 2.7e-06 26.8 0.3 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF37301 - 3.3e-08 33.3 0.4 3.5e-06 26.8 0.3 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF37301 - 7.6e-08 31.5 1.5 0.00053 19.4 0.0 2.9 3 0 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF37301 - 0.00068 19.9 0.0 0.0015 18.9 0.0 1.5 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Aldo_ket_red PF00248.21 ORF37301 - 0.041 13.1 0.0 0.053 12.7 0.0 1.3 1 0 0 1 1 1 0 Aldo/keto reductase family RICTOR_M PF14666.6 ORF37301 - 0.11 12.3 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain EF-hand_4 PF12763.7 ORF37301 - 0.21 11.6 0.6 4.9 7.2 0.1 2.3 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand HATPase_c PF02518.26 ORF34026 - 1.8e-19 70.3 0.0 2.9e-19 69.6 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPOB_a PF14689.6 ORF34026 - 5.9e-11 41.9 0.7 5.9e-11 41.9 0.7 2.0 2 0 0 2 2 2 1 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_5 PF14501.6 ORF34026 - 3.3e-10 39.8 0.0 3.3e-08 33.4 0.0 2.2 2 0 0 2 2 2 1 GHKL domain HATPase_c_2 PF13581.6 ORF34026 - 8.5e-06 25.7 0.0 1.3e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 ORF34026 - 0.0037 17.1 0.0 0.0063 16.3 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pkinase PF00069.25 ORF33932 - 1.1e-16 61.0 1.4 2e-16 60.2 0.2 2.0 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33932 - 2e-07 30.6 0.1 3.2e-07 29.9 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Myosin_TH1 PF06017.13 ORF33932 - 4.2e-05 23.3 4.6 4.2e-05 23.3 4.6 1.6 2 0 0 2 2 2 1 Unconventional myosin tail, actin- and lipid-binding Bestrophin PF01062.21 ORF28635 - 3.8e-05 23.2 0.0 5.2e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Ribosomal_L23eN PF03939.13 ORF27842 - 0.52 10.6 4.0 0.36 11.1 1.5 2.1 2 0 0 2 2 2 0 Ribosomal protein L23, N-terminal domain DUF3236 PF11576.8 ORF27842 - 0.71 9.6 5.8 0.22 11.2 0.3 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3236) DER1 PF04511.15 ORF27494 - 0.25 11.3 5.9 0.42 10.5 5.9 1.3 1 1 0 1 1 1 0 Der1-like family DUF4059 PF13268.6 ORF27494 - 6.5 7.2 6.8 0.29 11.6 1.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4059) RRM_1 PF00076.22 ORF25489 - 2.3e-10 40.1 0.0 9.2e-10 38.2 0.0 1.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF25489 - 0.077 13.0 0.0 0.24 11.5 0.0 1.8 1 0 0 1 1 1 0 RNA binding motif Cast PF10174.9 ORF25489 - 0.17 10.1 0.0 0.22 9.7 0.0 1.1 1 0 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone 2OG-FeII_Oxy_3 PF13640.6 ORF24658 - 2.7e-09 37.8 0.0 4.4e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Bacteriocin_IIc PF10439.9 ORF24188 - 0.13 12.4 43.2 1.2 9.3 16.6 2.5 2 0 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide Romo1 PF10247.9 ORF24188 - 5.6 7.4 19.5 1.5 9.2 7.1 3.3 1 1 1 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 DUF4694 PF15765.5 ORF20885 - 0.0053 16.8 0.9 0.0053 16.8 0.9 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4694) Nuc_sug_transp PF04142.15 ORF20170 - 3.1e-25 89.0 5.7 5.3e-25 88.2 5.7 1.3 1 1 0 1 1 1 1 Nucleotide-sugar transporter UAA PF08449.11 ORF20170 - 1.4e-06 27.8 0.6 1.4e-06 27.8 0.6 1.5 2 0 0 2 2 2 1 UAA transporter family EamA PF00892.20 ORF20170 - 1.9e-05 24.9 24.4 0.0015 18.7 9.8 2.1 2 0 0 2 2 2 2 EamA-like transporter family Ank_5 PF13857.6 ORF18475 - 4.7e-05 23.6 0.0 0.0034 17.7 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF18475 - 0.00063 20.0 0.0 0.0034 17.8 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 ORF18475 - 0.0011 19.5 0.2 0.013 16.0 0.1 2.4 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF18475 - 0.0036 17.9 0.0 0.015 15.8 0.0 2.0 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) SoxZ PF08770.11 ORF18475 - 0.14 12.0 0.0 2 8.3 0.0 2.2 2 0 0 2 2 2 0 Sulphur oxidation protein SoxZ DnaJ PF00226.31 ORF17557 - 9.3e-23 80.1 3.2 1.5e-22 79.4 3.2 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_C PF01556.18 ORF17557 - 0.036 14.2 0.1 0.082 13.0 0.0 1.6 2 0 0 2 2 2 0 DnaJ C terminal domain UAA PF08449.11 ORF12553 - 3e-48 164.6 10.5 3.4e-48 164.4 10.5 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF12553 - 1.8e-05 24.9 15.2 0.0016 18.7 7.6 2.2 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 ORF12553 - 0.00098 18.5 0.9 0.00098 18.5 0.9 1.5 2 0 0 2 2 2 1 Triose-phosphate Transporter family DUF2085 PF09858.9 ORF12553 - 0.16 12.4 1.4 0.37 11.3 0.0 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2085) DUF4569 PF15133.6 ORF11441 - 0.028 14.1 1.8 0.1 12.3 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4569) Lebercilin PF15619.6 ORF11441 - 0.79 9.4 14.4 2.1 8.0 5.6 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease PseudoU_synth_2 PF00849.22 ORF112285 - 1.4e-28 100.0 0.0 2.3e-28 99.3 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase Sigma54_activat PF00158.26 ORF112210 - 1e-48 165.2 0.1 1.5e-48 164.7 0.1 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 ORF112210 - 4.1e-16 58.5 3.8 1.1e-15 57.1 1.5 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family Sigma54_activ_2 PF14532.6 ORF112210 - 1.2e-12 48.1 0.0 2.6e-12 47.0 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 ORF112210 - 0.0017 18.4 0.0 0.0041 17.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF112210 - 0.18 11.9 0.0 0.3 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) PAN_4 PF14295.6 ORF112058 - 4.3e-06 26.5 13.3 0.00061 19.7 1.1 3.2 3 1 0 3 3 3 2 PAN domain PAN_1 PF00024.26 ORF112058 - 0.00034 20.5 0.4 0.00034 20.5 0.4 2.6 2 1 0 2 2 2 1 PAN domain MANEC PF07502.14 ORF112058 - 0.029 14.6 8.5 0.66 10.3 1.2 2.5 2 0 0 2 2 2 0 MANEC domain PAN_2 PF08276.11 ORF112058 - 0.031 14.4 5.7 0.15 12.2 0.3 2.8 2 0 0 2 2 2 0 PAN-like domain PAN_3 PF08277.12 ORF112058 - 2.5 8.0 11.3 0.22 11.3 3.4 2.8 2 1 0 2 2 2 0 PAN-like domain DER1 PF04511.15 ORF111025 - 0.25 11.3 5.9 0.42 10.5 5.9 1.3 1 1 0 1 1 1 0 Der1-like family DUF4059 PF13268.6 ORF111025 - 6.6 7.2 6.8 0.29 11.6 1.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4059) LtuB PF17455.2 ORF106221 - 0.25 12.0 0.8 58 4.4 0.1 3.0 3 0 0 3 3 3 0 Late transcription unit B Myosin_tail_1 PF01576.19 ORF106221 - 0.27 9.0 4.9 0.32 8.7 4.9 1.1 1 0 0 1 1 1 0 Myosin tail OEP PF02321.18 ORF106221 - 0.93 9.3 7.9 1.6 8.5 7.9 1.4 1 0 0 1 1 1 0 Outer membrane efflux protein PhnG PF06754.12 ORF106221 - 1.7 8.5 10.1 3.5 7.6 10.1 1.4 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG Ank_2 PF12796.7 ORF105351 - 3.4e-53 178.2 13.8 4.9e-18 65.5 0.1 3.5 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF105351 - 7.7e-31 106.1 7.7 8.3e-08 32.6 0.0 4.8 1 1 5 6 6 6 6 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF105351 - 8.6e-26 89.7 1.9 3.7e-06 27.1 0.3 4.9 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF105351 - 7.1e-22 75.1 3.8 0.0011 19.2 0.1 6.4 6 0 0 6 6 6 5 Ankyrin repeat Ank PF00023.30 ORF105351 - 9.5e-19 66.9 8.5 0.0027 18.1 0.0 6.7 7 0 0 7 7 7 5 Ankyrin repeat Asp PF00026.23 ORF104696 - 2.9e-12 46.7 0.1 3.6e-12 46.4 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF104696 - 0.0053 16.6 0.0 0.025 14.3 0.0 1.7 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Arm PF00514.23 ORF102379 - 6e-23 80.1 0.6 2.8e-09 36.7 0.1 3.8 4 0 0 4 4 4 3 Armadillo/beta-catenin-like repeat IBB PF01749.20 ORF102379 - 1.3e-08 35.1 4.6 2.5e-08 34.2 4.6 1.5 1 0 0 1 1 1 1 Importin beta binding domain HEAT_EZ PF13513.6 ORF102379 - 1.9e-07 31.4 0.0 4.4e-07 30.3 0.0 1.7 1 0 0 1 1 1 1 HEAT-like repeat HEAT PF02985.22 ORF102379 - 6.1e-06 26.1 0.1 0.0067 16.6 0.1 2.5 2 0 0 2 2 2 2 HEAT repeat RICTOR_V PF14668.6 ORF102379 - 0.00046 20.4 0.4 0.28 11.5 0.0 2.9 2 1 1 3 3 3 3 Rapamycin-insensitive companion of mTOR, domain 5 HEAT_2 PF13646.6 ORF102379 - 0.0042 17.4 0.0 0.024 15.0 0.0 1.9 1 1 0 1 1 1 1 HEAT repeats SATase_N PF06426.14 ORF100974 - 1.4e-39 134.6 0.2 2.1e-39 134.1 0.2 1.2 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal Hexapep PF00132.24 ORF100974 - 6.6e-12 44.7 6.2 6.6e-10 38.3 0.9 3.0 2 1 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF100974 - 0.00014 21.5 5.8 0.00058 19.5 1.1 2.4 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Gly-zipper_OmpA PF13436.6 ORF100974 - 6.5 6.6 8.2 1.1 9.1 3.6 2.1 2 1 0 2 2 2 0 Glycine-zipper domain Band_7 PF01145.25 ORF10081 - 5.1e-26 91.8 0.8 7.5e-26 91.2 0.8 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Med2 PF11214.8 ORF10081 - 0.055 13.6 1.3 0.096 12.8 1.3 1.4 1 0 0 1 1 1 0 Mediator complex subunit 2 DUF1810 PF08837.11 NODE_25941_length_817_cov_111.180307_g20262_i0reverse_frame_3 - 0.082 12.7 0.1 0.13 12.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1810) NYD-SP28_assoc PF14775.6 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_3 - 0.017 15.2 0.9 0.07 13.2 0.1 2.1 2 0 0 2 2 2 0 Sperm tail C-terminal domain zf-RING_2 PF13639.6 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 3.5e-07 30.4 5.1 3.5e-07 30.4 5.1 1.8 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 1.5e-06 28.1 4.0 3.6e-06 26.9 4.0 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 1.1e-05 25.6 4.6 2.8e-05 24.3 4.6 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.00017 21.4 5.0 0.00043 20.1 5.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.00066 19.5 5.3 0.00066 19.5 5.3 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.0017 18.1 5.4 0.0038 16.9 5.4 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_4 PF15227.6 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.0019 18.3 4.0 0.0019 18.3 4.0 1.8 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.0022 18.0 1.1 0.0044 17.0 1.1 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.0043 17.0 4.9 0.0043 17.0 4.9 2.4 2 1 1 3 3 3 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.0089 15.6 2.5 0.0089 15.6 2.5 1.6 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.018 15.2 2.0 0.045 13.9 2.0 1.7 1 0 0 1 1 1 0 RING-variant domain U-box PF04564.15 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.02 15.1 0.0 0.059 13.6 0.0 1.8 1 0 0 1 1 1 0 U-box domain zf-C3HC4_3 PF13920.6 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.027 14.3 3.1 0.027 14.3 3.1 1.9 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_25926_length_817_cov_201.483376_g15564_i1forward_frame_2 - 0.47 10.4 7.1 0.085 12.7 2.9 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Sushi_2 PF09014.10 NODE_25910_length_818_cov_2.042146_g20237_i0reverse_frame_3 - 0.2 11.6 3.0 0.38 10.7 0.5 2.3 2 0 0 2 2 2 0 Beta-2-glycoprotein-1 fifth domain TMEM107 PF14995.6 NODE_25902_length_818_cov_85.277139_g20229_i0forward_frame_3 - 0.18 12.2 10.5 0.088 13.2 7.1 2.1 1 1 0 2 2 2 0 Transmembrane protein TMEM132D_C PF15706.5 NODE_25873_length_818_cov_745.524904_g20206_i0reverse_frame_2 - 0.86 9.4 2.7 0.74 9.6 0.1 2.0 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term IPP-2 PF04979.14 NODE_25862_length_819_cov_2.663265_g20202_i0reverse_frame_3 - 0.48 11.2 9.5 0.99 10.1 9.5 1.6 1 1 0 1 1 1 0 Protein phosphatase inhibitor 2 (IPP-2) UPF0564 PF10595.9 NODE_25862_length_819_cov_2.663265_g20202_i0reverse_frame_2 - 8.5e-33 113.9 21.8 8.5e-33 113.9 21.8 1.8 2 0 0 2 2 2 1 Uncharacterised protein family UPF0564 TMEM144 PF07857.12 NODE_25838_length_819_cov_352.389031_g20180_i0forward_frame_2 - 3.9e-10 39.2 0.3 5.4e-10 38.7 0.3 1.1 1 0 0 1 1 1 1 Transmembrane family, TMEM144 of transporters RNase_H PF00075.24 ORF99288 - 0.00049 20.3 0.0 0.00084 19.5 0.0 1.5 1 1 0 1 1 1 1 RNase H HEAT PF02985.22 ORF9904 - 3.5e-05 23.7 0.0 0.82 10.1 0.0 3.4 3 0 0 3 3 3 2 HEAT repeat CLASP_N PF12348.8 ORF9904 - 0.00086 18.9 1.5 0.14 11.7 0.2 2.5 2 1 0 2 2 2 2 CLASP N terminal Adaptin_N PF01602.20 ORF9904 - 0.0046 15.6 3.6 0.005 15.5 1.0 2.0 2 0 0 2 2 2 1 Adaptin N terminal region RTP1_C1 PF10363.9 ORF9904 - 0.0052 17.0 0.6 0.015 15.5 0.1 2.0 2 0 0 2 2 2 1 Required for nuclear transport of RNA pol II C-terminus 1 Cnd1 PF12717.7 ORF9904 - 0.0062 16.6 2.3 0.0062 16.6 2.3 3.1 2 2 1 3 3 3 1 non-SMC mitotic condensation complex subunit 1 IFRD PF05004.13 ORF9904 - 0.0067 15.6 2.1 0.013 14.6 0.3 2.1 2 0 0 2 2 2 1 Interferon-related developmental regulator (IFRD) Vac14_Fab1_bd PF12755.7 ORF9904 - 0.016 15.8 2.1 0.14 12.7 0.5 2.7 2 1 1 3 3 3 0 Vacuolar 14 Fab1-binding region RET_CLD1 PF17756.1 ORF9904 - 0.083 13.2 0.1 0.19 12.0 0.0 1.7 1 1 0 1 1 1 0 RET Cadherin like domain 1 Importin_rep_5 PF18816.1 ORF9904 - 0.91 9.9 3.0 3.4 8.0 0.1 3.1 2 1 0 3 3 3 0 Importin repeat RRM_1 PF00076.22 ORF91883 - 6e-20 70.8 0.0 1.2e-19 69.9 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 ORF91883 - 2.7e-10 40.2 1.1 2.7e-10 40.2 1.1 2.1 3 0 0 3 3 3 1 WW domain RRM_5 PF13893.6 ORF91883 - 0.0052 16.4 0.0 0.0082 15.7 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ish1 PF10281.9 ORF91883 - 0.011 16.0 0.1 0.11 12.8 0.0 2.4 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein CSD PF00313.22 ORF91883 - 0.028 14.3 0.6 0.084 12.7 0.6 1.8 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain RNA_bind PF08675.11 ORF91883 - 0.036 14.1 0.3 0.12 12.4 0.1 2.0 2 1 0 2 2 2 0 RNA binding domain Nup35_RRM_2 PF14605.6 ORF91883 - 0.037 14.0 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Exo_endo_phos PF03372.23 ORF91409 - 1.6e-06 27.8 0.0 5e-06 26.2 0.0 1.7 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family PhnG PF06754.12 ORF91409 - 0.048 13.6 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG Trypan_PARP PF05887.11 ORF91345 - 2.2 8.3 5.5 0.44 10.5 2.1 1.6 2 0 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) PKD_channel PF08016.12 ORF88918 - 3.9e-10 39.0 9.3 5.4e-10 38.5 9.3 1.1 1 0 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF88918 - 9.2e-05 21.8 9.2 0.00012 21.4 9.2 1.2 1 0 0 1 1 1 1 Ion transport protein TMEM252 PF15664.5 ORF88918 - 0.085 12.6 0.5 0.15 11.8 0.5 1.3 1 0 0 1 1 1 0 Transmembrane protein 252 family SieB PF14163.6 ORF88918 - 0.18 11.3 1.5 0.92 9.0 0.0 2.2 2 0 0 2 2 2 0 Super-infection exclusion protein B Alpha-mann_mid PF09261.11 ORF87615 - 3.8e-10 39.8 0.1 6.5e-10 39.0 0.1 1.3 1 0 0 1 1 1 1 Alpha mannosidase middle domain BRCT PF00533.26 ORF85672 - 0.0013 19.0 0.0 0.42 11.0 0.0 3.0 2 1 0 2 2 2 2 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 ORF85672 - 0.0016 18.8 0.0 2.4 8.6 0.0 3.0 2 1 0 2 2 2 2 BRCT domain, a BRCA1 C-terminus domain Archaeal_AmoA PF12942.7 ORF85442 - 0.16 11.7 0.0 1.3 8.7 0.0 2.0 2 0 0 2 2 2 0 Archaeal ammonia monooxygenase subunit A (AmoA) Vps51 PF08700.11 ORF84223 - 0.0076 16.3 6.6 0.0086 16.1 4.4 2.3 1 1 0 1 1 1 1 Vps51/Vps67 Laminin_II PF06009.12 ORF84223 - 0.0076 16.3 4.8 0.0076 16.3 4.8 2.4 1 1 1 2 2 2 1 Laminin Domain II DUF3294 PF07957.11 ORF84223 - 0.012 15.4 4.2 0.012 15.4 4.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3294) HeLo PF14479.6 ORF84223 - 0.24 11.2 6.8 0.26 11.1 5.0 2.0 1 1 1 2 2 2 0 Prion-inhibition and propagation DUF2312 PF10073.9 ORF84223 - 0.84 9.3 6.3 1.9 8.2 0.1 3.2 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) Pox_A32 PF04665.12 ORF79796 - 1.1e-05 25.1 0.0 2.6e-05 23.8 0.0 1.5 1 1 0 1 1 1 1 Poxvirus A32 protein TPT PF03151.16 ORF77759 - 1.2e-11 44.6 13.6 1.4e-11 44.3 13.6 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF77759 - 3.7e-09 36.9 17.8 2.7e-06 27.6 4.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF2682 PF10909.8 ORF75543 - 0.78 10.3 8.3 3.8 8.1 0.4 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2682) Queuosine_synth PF02547.15 ORF73636 - 1.2e-100 336.8 0.0 1.3e-100 336.7 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein Methyltransf_11 PF08241.12 ORF72819 - 5.2e-20 71.9 0.0 8.2e-20 71.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF72819 - 6.2e-19 68.5 0.0 1e-18 67.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF72819 - 3.6e-16 59.3 0.0 4.7e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF72819 - 1e-14 54.4 0.0 1.4e-14 54.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF72819 - 3.1e-12 46.6 0.0 4.8e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF72819 - 4.2e-12 46.7 0.0 7e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF72819 - 1.8e-08 34.0 0.0 2.4e-08 33.6 0.0 1.4 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 ORF72819 - 1.1e-07 31.6 0.0 2.4e-07 30.5 0.0 1.5 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW MTS PF05175.14 ORF72819 - 3.2e-05 23.5 0.0 7.9e-05 22.3 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase small domain DREV PF05219.12 ORF72819 - 5.6e-05 22.4 0.0 0.00013 21.2 0.0 1.6 1 1 0 1 1 1 1 DREV methyltransferase Sterol_MT_C PF08498.10 ORF72819 - 6.8e-05 23.1 0.0 0.00013 22.2 0.0 1.4 1 0 0 1 1 1 1 Sterol methyltransferase C-terminal Methyltransf_2 PF00891.18 ORF72819 - 0.0043 16.4 0.0 0.022 14.1 0.0 1.9 1 1 0 1 1 1 1 O-methyltransferase domain PCMT PF01135.19 ORF72819 - 0.0075 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 ORF72819 - 0.0087 16.1 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 ORF72819 - 0.015 14.2 0.0 0.022 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_8 PF05148.15 ORF72819 - 0.027 14.3 0.1 1.6 8.6 0.0 2.6 2 1 0 3 3 3 0 Hypothetical methyltransferase PrmA PF06325.13 ORF72819 - 0.028 13.8 0.0 0.037 13.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) ADH_zinc_N PF00107.26 ORF72819 - 0.04 13.9 0.0 0.072 13.1 0.0 1.5 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DOT1 PF08123.13 ORF72819 - 0.044 13.3 0.0 0.08 12.5 0.0 1.5 1 1 0 1 1 1 0 Histone methylation protein DOT1 TehB PF03848.14 ORF72819 - 0.096 12.1 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB TylF PF05711.11 ORF72819 - 0.17 11.1 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) peroxidase PF00141.23 ORF72814 - 5.6e-46 157.1 0.0 9e-46 156.4 0.0 1.3 1 0 0 1 1 1 1 Peroxidase WD40 PF00400.32 ORF69955 - 1.7e-11 44.5 0.8 0.00016 22.4 0.0 4.7 5 1 1 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF69955 - 1e-07 32.1 0.1 0.0028 17.9 0.0 3.5 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain PQQ_2 PF13360.6 ORF69955 - 0.12 12.0 0.0 0.17 11.4 0.0 1.4 1 1 0 1 1 1 0 PQQ-like domain Transposase_21 PF02992.14 ORF66691 - 0.14 11.3 0.1 0.29 10.4 0.1 1.4 1 0 0 1 1 1 0 Transposase family tnp2 Hamartin PF04388.12 ORF66691 - 1.9 7.1 23.6 2.2 6.8 23.6 1.1 1 0 0 1 1 1 0 Hamartin protein peroxidase PF00141.23 ORF63520 - 5.6e-46 157.1 0.0 9e-46 156.4 0.0 1.3 1 0 0 1 1 1 1 Peroxidase Alpha-mann_mid PF09261.11 ORF61699 - 3.8e-10 39.8 0.1 6.5e-10 39.0 0.1 1.3 1 0 0 1 1 1 1 Alpha mannosidase middle domain Spc7 PF08317.11 ORF60286 - 0.0007 18.6 25.4 0.049 12.5 6.7 2.1 2 0 0 2 2 2 2 Spc7 kinetochore protein DUF2353 PF09789.9 ORF60286 - 0.0016 17.8 13.9 0.034 13.5 1.3 2.6 1 1 1 3 3 3 3 Uncharacterized coiled-coil protein (DUF2353) Atg14 PF10186.9 ORF60286 - 0.028 13.5 18.3 0.015 14.4 4.1 2.1 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Filament PF00038.21 ORF60286 - 0.045 13.3 22.7 0.17 11.4 7.9 2.1 2 0 0 2 2 2 0 Intermediate filament protein bZIP_1 PF00170.21 ORF60286 - 0.072 13.2 0.1 0.072 13.2 0.1 3.4 3 0 0 3 3 3 0 bZIP transcription factor ADIP PF11559.8 ORF60286 - 0.11 12.6 22.4 0.04 14.0 4.3 2.6 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF1664 PF07889.12 ORF60286 - 0.23 11.5 8.9 0.33 11.0 2.2 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF60286 - 0.53 10.7 0.1 0.53 10.7 0.1 3.4 5 0 0 5 5 3 0 Flagella accessory protein C (FlaC) Syntaxin-6_N PF09177.11 ORF60286 - 0.63 10.6 14.6 0.068 13.7 3.1 3.2 2 1 0 2 2 2 0 Syntaxin 6, N-terminal TPR_MLP1_2 PF07926.12 ORF60286 - 1.2 9.2 36.9 0.19 11.8 15.5 3.1 2 2 1 3 3 3 0 TPR/MLP1/MLP2-like protein DUF3584 PF12128.8 ORF60286 - 1.3 6.4 30.2 0.21 9.1 10.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) NPV_P10 PF05531.12 ORF60286 - 1.4 9.5 6.7 1.8 9.1 0.3 3.3 3 2 0 3 3 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 ORF60286 - 1.5 9.5 11.1 0.26 11.9 0.9 2.9 2 1 1 3 3 3 0 Initiation control protein YabA Fez1 PF06818.15 ORF60286 - 2 8.8 21.1 2.9 8.3 6.2 2.3 2 0 0 2 2 2 0 Fez1 BLOC1_2 PF10046.9 ORF60286 - 8.3 6.8 14.5 0.12 12.7 1.6 3.3 2 2 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HAUS-augmin3 PF14932.6 ORF60286 - 9 5.8 25.8 0.17 11.5 7.7 2.3 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 DUF724 PF05266.14 ORF60286 - 9.7 6.0 22.8 0.85 9.4 5.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF724) Het-C PF07217.11 ORF60286 - 9.8 4.6 9.6 6 5.3 0.6 2.5 2 1 0 2 2 2 0 Heterokaryon incompatibility protein Het-C Pox_A32 PF04665.12 ORF52419 - 4.6e-06 26.3 0.0 4.8e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 Poxvirus A32 protein DUF4586 PF15239.6 ORF50818 - 2.6e-22 80.4 15.3 9.9e-22 78.5 15.3 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4586) Pox_A32 PF04665.12 ORF49319 - 4.6e-06 26.3 0.0 4.8e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 Poxvirus A32 protein Amino_oxidase PF01593.24 ORF49162 - 7.1e-06 25.6 0.4 8.6e-05 22.0 0.4 2.4 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase DUF4241 PF14025.6 ORF48324 - 0.013 15.8 0.1 0.13 12.5 0.1 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF4241) Aminotran_1_2 PF00155.21 ORF46966 - 2.8e-30 105.7 0.0 3.3e-30 105.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF46966 - 0.0064 15.5 0.0 0.0085 15.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 ORF46966 - 0.059 12.7 0.0 0.093 12.0 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family DUF5354 PF17305.2 ORF46966 - 0.13 12.5 0.3 2.8 8.1 0.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5354) Asp PF00026.23 ORF44661 - 2e-18 66.9 0.1 2.4e-18 66.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF44661 - 0.0019 18.0 0.0 0.0049 16.7 0.0 1.7 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal 2OG-FeII_Oxy_3 PF13640.6 ORF41002 - 3.5e-11 43.9 0.0 5.8e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF41002 - 0.0098 16.5 0.0 0.028 15.1 0.0 1.8 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily TraH_2 PF06871.11 ORF41002 - 0.022 14.4 0.0 0.032 13.9 0.0 1.2 1 0 0 1 1 1 0 TraH_2 TPH PF13868.6 ORF32192 - 2.6e-17 62.4 78.9 3.1e-17 62.1 78.9 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain Na_H_Exchanger PF00999.21 ORF31358 - 0.0013 17.6 3.3 0.0016 17.3 3.3 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family EnY2 PF10163.9 ORF31358 - 0.13 12.6 1.5 0.83 10.1 0.1 2.6 3 0 0 3 3 3 0 Transcription factor e(y)2 TTL PF03133.15 ORF28421 - 1.4e-14 54.0 0.0 2.6e-11 43.2 0.0 2.1 1 1 1 2 2 2 2 Tubulin-tyrosine ligase family MORN_2 PF07661.13 ORF25337 - 0.15 12.4 4.6 3.7 8.1 1.5 3.8 3 0 0 3 3 3 0 MORN repeat variant Shikimate_dh_N PF08501.11 ORF2279 - 8.1e-24 83.7 0.0 1.3e-23 83.0 0.0 1.3 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 ORF2279 - 1.8e-10 40.4 0.5 3.3e-10 39.6 0.5 1.4 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 ORF2279 - 2.3e-10 40.6 0.0 5.8e-10 39.4 0.0 1.6 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase TPR_2 PF07719.17 ORF21819 - 0.00012 21.9 0.6 0.00066 19.6 0.0 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF21819 - 0.0035 17.1 0.0 0.012 15.5 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF21819 - 0.0071 16.5 2.0 0.014 15.6 1.0 2.0 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF21819 - 0.017 15.3 0.0 0.35 11.2 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF21819 - 0.28 12.1 0.1 0.28 12.1 0.1 4.0 3 1 1 4 4 4 0 Tetratricopeptide repeat Methyltransf_11 PF08241.12 ORF21420 - 5.2e-20 71.9 0.0 8.2e-20 71.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF21420 - 6.2e-19 68.5 0.0 1e-18 67.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF21420 - 3.6e-16 59.3 0.0 4.7e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF21420 - 1e-14 54.4 0.0 1.4e-14 54.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF21420 - 3.1e-12 46.6 0.0 4.8e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF21420 - 4.2e-12 46.7 0.0 7e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF21420 - 1.8e-08 34.0 0.0 2.4e-08 33.6 0.0 1.4 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 ORF21420 - 1.1e-07 31.6 0.0 2.4e-07 30.5 0.0 1.5 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW MTS PF05175.14 ORF21420 - 3.2e-05 23.5 0.0 7.9e-05 22.3 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase small domain DREV PF05219.12 ORF21420 - 5.6e-05 22.4 0.0 0.00013 21.2 0.0 1.6 1 1 0 1 1 1 1 DREV methyltransferase Sterol_MT_C PF08498.10 ORF21420 - 6.8e-05 23.1 0.0 0.00013 22.2 0.0 1.4 1 0 0 1 1 1 1 Sterol methyltransferase C-terminal Methyltransf_2 PF00891.18 ORF21420 - 0.0043 16.4 0.0 0.022 14.1 0.0 1.9 1 1 0 1 1 1 1 O-methyltransferase domain PCMT PF01135.19 ORF21420 - 0.0075 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 ORF21420 - 0.0087 16.1 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 ORF21420 - 0.015 14.2 0.0 0.022 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_8 PF05148.15 ORF21420 - 0.027 14.3 0.1 1.6 8.6 0.0 2.6 2 1 0 3 3 3 0 Hypothetical methyltransferase PrmA PF06325.13 ORF21420 - 0.028 13.8 0.0 0.037 13.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) ADH_zinc_N PF00107.26 ORF21420 - 0.04 13.9 0.0 0.072 13.1 0.0 1.5 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DOT1 PF08123.13 ORF21420 - 0.044 13.3 0.0 0.08 12.5 0.0 1.5 1 1 0 1 1 1 0 Histone methylation protein DOT1 TehB PF03848.14 ORF21420 - 0.096 12.1 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB TylF PF05711.11 ORF21420 - 0.17 11.1 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) RRM_1 PF00076.22 ORF19286 - 6e-20 70.8 0.0 1.2e-19 69.9 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 ORF19286 - 2.7e-10 40.2 1.1 2.7e-10 40.2 1.1 2.1 3 0 0 3 3 3 1 WW domain RRM_5 PF13893.6 ORF19286 - 0.0052 16.4 0.0 0.0082 15.7 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ish1 PF10281.9 ORF19286 - 0.011 16.0 0.1 0.11 12.8 0.0 2.4 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein CSD PF00313.22 ORF19286 - 0.028 14.3 0.6 0.084 12.7 0.6 1.8 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain RNA_bind PF08675.11 ORF19286 - 0.036 14.1 0.3 0.12 12.4 0.1 2.0 2 1 0 2 2 2 0 RNA binding domain Nup35_RRM_2 PF14605.6 ORF19286 - 0.037 14.0 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Na_H_Exchanger PF00999.21 ORF1696 - 0.0013 17.6 3.3 0.0016 17.3 3.3 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family EnY2 PF10163.9 ORF1696 - 0.13 12.6 1.5 0.83 10.1 0.1 2.6 3 0 0 3 3 3 0 Transcription factor e(y)2 Pkinase PF00069.25 ORF16727 - 1.9e-71 240.5 0.0 2.2e-71 240.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF16727 - 2.4e-33 115.5 0.0 2.9e-33 115.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF16727 - 4.2e-05 23.0 0.2 0.062 12.6 0.0 2.3 1 1 1 2 2 2 2 Kinase-like Haspin_kinase PF12330.8 ORF16727 - 0.0016 17.4 0.1 0.0055 15.7 0.1 1.7 1 1 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF16727 - 0.011 15.6 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF16727 - 0.016 14.9 0.1 0.87 9.2 0.0 2.2 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Seadorna_VP7 PF07387.11 ORF16727 - 0.033 13.2 0.0 0.05 12.7 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Kdo PF06293.14 ORF16727 - 0.056 12.8 0.4 0.12 11.7 0.4 1.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 ORF16727 - 0.057 12.9 0.0 0.078 12.5 0.0 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL CBF PF03914.17 ORF16727 - 0.12 12.4 0.0 0.56 10.2 0.0 1.8 1 1 1 2 2 2 0 CBF/Mak21 family CEP209_CC5 PF16574.5 ORF16561 - 0.00062 19.9 4.4 0.00062 19.9 4.4 2.0 2 0 0 2 2 2 1 Coiled-coil region of centrosome protein CE290 DUF4407 PF14362.6 ORF16561 - 0.68 9.2 7.3 1.7 7.9 7.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Cnn_1N PF07989.11 ORF16561 - 5.5 7.2 14.4 0.15 12.2 3.3 3.4 4 0 0 4 4 4 0 Centrosomin N-terminal motif 1 BRCT PF00533.26 ORF14042 - 0.0013 19.0 0.0 0.42 11.0 0.0 3.0 2 1 0 2 2 2 2 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 ORF14042 - 0.0016 18.8 0.0 2.4 8.6 0.0 3.0 2 1 0 2 2 2 2 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 ORF11919 - 0.0013 19.0 0.0 0.42 11.0 0.0 3.0 2 1 0 2 2 2 2 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 ORF11919 - 0.0016 18.8 0.0 2.4 8.6 0.0 3.0 2 1 0 2 2 2 2 BRCT domain, a BRCA1 C-terminus domain PLAC8 PF04749.17 ORF110861 - 6.8e-07 30.2 12.1 1.4e-06 29.2 12.1 1.6 1 0 0 1 1 1 1 PLAC8 family Sushi PF00084.20 ORF110861 - 0.0011 19.5 0.4 0.0025 18.4 0.4 1.6 1 0 0 1 1 1 1 Sushi repeat (SCR repeat) Asp PF00026.23 ORF110836 - 2e-18 66.9 0.1 2.4e-18 66.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF110836 - 0.0019 18.0 0.0 0.0049 16.7 0.0 1.7 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF107172 - 0.16 12.7 0.0 0.38 11.4 0.0 1.7 1 0 0 1 1 1 0 Aspartyl protease PHAT PF09246.10 ORF106264 - 0.013 15.4 1.2 0.021 14.6 0.3 1.9 2 1 0 2 2 2 0 PHAT DUF3861 PF12977.7 ORF106264 - 0.049 13.8 0.1 0.11 12.6 0.1 1.6 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3861) Thioredoxin_16 PF18569.1 ORF106264 - 0.11 12.7 2.8 1.4 9.1 0.3 3.0 3 0 0 3 3 3 0 Thioredoxin-like domain TMEM154 PF15102.6 ORF104928 - 9.3e-05 22.4 0.0 0.00018 21.5 0.0 1.4 1 0 0 1 1 1 1 TMEM154 protein family Rax2 PF12768.7 ORF104928 - 0.016 14.7 0.1 0.016 14.7 0.1 2.3 1 1 2 3 3 3 0 Cortical protein marker for cell polarity DUF4064 PF13273.6 ORF104928 - 0.02 15.2 1.1 0.02 15.2 1.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) MLANA PF14991.6 ORF104928 - 0.1 12.9 0.0 0.18 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein melan-A Stevor PF17410.2 ORF104928 - 0.11 12.0 1.5 0.16 11.5 1.0 1.5 1 1 0 1 1 1 0 Subtelomeric Variable Open Reading frame Amnionless PF14828.6 ORF104928 - 0.12 11.2 0.0 0.19 10.5 0.0 1.3 1 0 0 1 1 1 0 Amnionless RIFIN PF02009.16 ORF104928 - 0.13 12.1 0.4 0.18 11.7 0.4 1.4 1 1 0 1 1 1 0 Rifin MGC-24 PF05283.11 ORF104928 - 0.91 10.0 4.9 0.19 12.2 0.7 1.9 2 0 0 2 2 2 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin BPD_transp_1 PF00528.22 ORF104928 - 1.1 9.0 6.7 0.12 12.1 2.0 1.8 1 1 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component Helicase_C PF00271.31 ORF1014 - 1.1e-28 99.8 0.1 3.4e-28 98.2 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF1014 - 5.3e-06 26.3 0.2 1.4e-05 24.9 0.1 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 ORF1014 - 0.00066 19.0 0.1 0.00098 18.4 0.1 1.4 1 1 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase DUF4287 PF14117.6 ORF1014 - 0.14 12.4 0.0 0.31 11.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4287) rve PF00665.26 ORF100109 - 1.1e-26 93.4 0.0 2e-26 92.5 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF100109 - 6.1e-15 54.8 0.1 1.8e-14 53.3 0.1 1.9 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF100109 - 4.8e-12 45.9 0.8 1.1e-11 44.7 0.8 1.6 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.6 ORF100109 - 8.5e-11 41.8 3.9 2.1e-10 40.6 3.9 1.7 1 0 0 1 1 1 1 HTH-like domain DDE_Tnp_IS240 PF13610.6 ORF100109 - 6.6e-05 23.2 0.4 9.5e-05 22.6 0.0 1.4 2 0 0 2 2 2 1 DDE domain GWT1 PF06423.12 NODE_26138_length_812_cov_612.402831_g20430_i0reverse_frame_1 - 0.44 10.7 6.8 1.1 9.4 6.7 1.9 1 1 0 1 1 1 0 GWT1 GWT1 PF06423.12 NODE_26137_length_812_cov_635.638353_g20429_i0forward_frame_1 - 0.24 11.5 4.5 0.59 10.2 4.5 1.8 1 1 0 1 1 1 0 GWT1 2-Hacid_dh_C PF02826.19 NODE_26078_length_814_cov_2.351733_g20380_i0forward_frame_2 - 9.4e-30 103.3 0.0 1.6e-29 102.5 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 NODE_26078_length_814_cov_2.351733_g20380_i0forward_frame_2 - 3.2e-29 101.3 0.0 8.2e-29 100.0 0.0 1.4 1 1 1 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CoA_binding_2 PF13380.6 NODE_26078_length_814_cov_2.351733_g20380_i0forward_frame_2 - 0.1 13.1 0.0 0.23 12.0 0.0 1.5 1 1 0 1 1 1 0 CoA binding domain Adhesin_P1_N PF18652.1 NODE_25980_length_816_cov_128.176697_g20293_i0forward_frame_3 - 0.17 11.9 0.0 0.17 11.9 0.0 3.3 2 1 1 3 3 3 0 Adhesin P1 N-terminal domain DUF2393 PF09624.10 NODE_25973_length_816_cov_187.854033_g20286_i0reverse_frame_2 - 0.46 10.5 12.4 0.24 11.4 7.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2393) Tower PF09121.10 NODE_25973_length_816_cov_187.854033_g20286_i0forward_frame_2 - 0.0027 17.8 2.8 0.018 15.3 0.3 2.8 2 0 0 2 2 2 1 Tower Lipoprotein_9 PF03180.14 ORF97347 - 1.5e-101 338.5 3.0 1.7e-101 338.3 3.0 1.0 1 0 0 1 1 1 1 NLPA lipoprotein OpuAC PF04069.12 ORF97347 - 0.00013 21.7 1.3 0.00019 21.1 1.3 1.5 1 1 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Phosphonate-bd PF12974.7 ORF97347 - 0.0034 17.0 0.2 0.014 15.0 0.0 1.8 2 0 0 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.11 ORF97347 - 0.014 15.4 0.1 0.5 10.3 0.0 2.1 2 0 0 2 2 2 0 NMT1/THI5 like DnaJ PF00226.31 ORF96446 - 4.3e-11 42.8 0.1 7.9e-11 41.9 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain TerB PF05099.13 ORF96446 - 5.4e-10 39.4 0.8 5.4e-10 39.4 0.8 1.8 2 0 0 2 2 2 1 Tellurite resistance protein TerB HTH_10 PF04967.12 ORF96446 - 0.0003 20.5 0.0 0.031 14.1 0.0 2.7 2 0 0 2 2 2 1 HTH DNA binding domain DUF4311 PF14188.6 ORF96446 - 0.0031 17.3 0.7 0.0047 16.7 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4311) 5TM-5TMR_LYT PF07694.12 ORF96446 - 8.9 5.8 6.9 88 2.5 0.0 2.3 2 0 0 2 2 2 0 5TMR of 5TMR-LYT Syntaxin-18_N PF10496.9 ORF96224 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF96224 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF96224 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like cNMP_binding PF00027.29 ORF9552 - 5.9e-15 55.1 0.0 9.2e-15 54.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF4407 PF14362.6 ORF9552 - 0.0035 16.8 1.4 0.0047 16.3 1.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) PASTA PF03793.19 ORF9552 - 0.038 13.8 0.2 1.1 9.2 0.0 2.5 2 0 0 2 2 2 0 PASTA domain DEC-1_N PF04625.13 ORF9552 - 0.12 11.4 0.5 0.16 10.9 0.5 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region 2OG-FeII_Oxy_3 PF13640.6 ORF94261 - 5.6e-14 52.8 0.0 1.2e-13 51.8 0.0 1.6 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily PAP_PilO PF06864.12 ORF9407 - 0.07 11.9 3.9 0.11 11.2 3.9 1.3 1 0 0 1 1 1 0 Pilin accessory protein (PilO) Ricin_B_lectin PF00652.22 ORF92434 - 4.9e-17 62.4 1.1 7.2e-17 61.8 1.1 1.2 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain Glyco_transf_7C PF02709.14 ORF92434 - 2.1e-06 27.3 0.1 7.1e-06 25.6 0.1 1.9 2 0 0 2 2 2 1 N-terminal domain of galactosyltransferase RicinB_lectin_2 PF14200.6 ORF92434 - 0.044 14.5 0.8 2.5 8.9 0.4 2.4 2 0 0 2 2 2 0 Ricin-type beta-trefoil lectin domain-like FKBP_N PF01346.18 ORF91966 - 2.8 9.0 6.5 0.68 10.9 0.2 2.7 2 1 1 3 3 3 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ANAPC4_WD40 PF12894.7 ORF8990 - 0.00076 19.7 0.2 0.027 14.8 0.0 2.9 2 1 1 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain Coatomer_WDAD PF04053.14 ORF8990 - 0.0038 16.3 3.0 0.0046 16.0 3.0 1.1 1 0 0 1 1 1 1 Coatomer WD associated region WD40 PF00400.32 ORF8990 - 0.02 15.7 0.0 2.3 9.2 0.0 3.3 3 0 0 3 3 3 0 WD domain, G-beta repeat DUF4934 PF16288.5 ORF8990 - 0.066 13.1 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4934) MG1 PF17790.1 ORF8990 - 0.079 13.4 0.5 2.4 8.6 0.0 2.6 2 1 0 2 2 2 0 Macroglobulin domain MG1 PH_12 PF16457.5 ORF8990 - 0.72 10.4 3.2 1.9 9.0 0.1 2.3 1 1 1 2 2 2 0 Pleckstrin homology domain Form_Nir_trans PF01226.17 ORF89181 - 2.9e-76 255.9 28.2 3.2e-76 255.8 28.2 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter Keratin_assoc PF09775.9 ORF89181 - 3.1 7.4 19.7 0.43 10.2 3.6 3.5 2 1 1 3 3 3 0 Keratinocyte-associated protein 2 PARG_cat PF05028.14 ORF87951 - 5.7e-33 114.6 0.0 4e-32 111.8 0.0 1.9 1 1 0 1 1 1 1 Poly (ADP-ribose) glycohydrolase (PARG) S1 PF00575.23 ORF87902 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF87902 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain Syntaxin-18_N PF10496.9 ORF86699 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF86699 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF86699 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like zf-C3HC4_3 PF13920.6 ORF86563 - 4.2e-07 29.7 11.0 8.1e-07 28.8 11.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF86563 - 1.4e-06 28.1 11.5 5.8e-05 22.9 12.4 2.4 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF86563 - 3.9e-06 27.1 13.7 7.8e-06 26.1 13.7 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF86563 - 4.1e-06 26.5 14.8 7.5e-06 25.7 14.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF86563 - 0.00063 19.8 13.4 0.0024 18.0 13.6 1.9 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 ORF86563 - 0.0018 18.1 14.5 0.0047 16.8 14.5 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF86563 - 0.0044 17.0 13.9 0.085 12.8 14.4 2.4 1 1 1 2 2 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF86563 - 0.008 16.5 10.6 0.03 14.6 10.6 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain TaqI_C PF12950.7 ORF86563 - 0.06 13.4 0.3 0.06 13.4 0.3 1.9 2 0 0 2 2 2 0 TaqI-like C-terminal specificity domain zf-RING_UBOX PF13445.6 ORF86563 - 0.071 13.2 12.3 0.35 10.9 12.3 2.2 1 1 0 1 1 1 0 RING-type zinc-finger FYVE PF01363.21 ORF86563 - 0.19 11.9 11.5 0.5 10.5 11.5 1.7 1 0 0 1 1 1 0 FYVE zinc finger zf-B_box PF00643.24 ORF86563 - 0.7 10.1 12.4 0.092 12.9 7.2 2.1 2 0 0 2 2 2 0 B-box zinc finger RabGAP-TBC PF00566.18 ORF86563 - 3.9 7.1 6.6 0.76 9.4 1.1 2.0 2 0 0 2 2 2 0 Rab-GTPase-TBC domain Syntaxin-18_N PF10496.9 ORF85769 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF85769 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF85769 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like E2F_TDP PF02319.20 ORF85690 - 0.025 14.6 0.2 0.2 11.7 0.3 2.0 2 0 0 2 2 2 0 E2F/DP family winged-helix DNA-binding domain TauE PF01925.19 ORF82310 - 6.3e-10 39.1 20.2 3.8e-09 36.5 20.2 1.9 1 1 0 1 1 1 1 Sulfite exporter TauE/SafE DUF2207 PF09972.9 ORF82310 - 5.9e-05 22.0 0.0 5.9e-05 22.0 0.0 1.8 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) LAP1C PF05609.12 ORF82310 - 0.0024 17.1 1.7 0.0027 16.9 1.7 1.1 1 0 0 1 1 1 1 Lamina-associated polypeptide 1C (LAP1C) RRN3 PF05327.11 ORF82310 - 0.034 12.7 0.0 0.034 12.7 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 PIRT PF15099.6 ORF82310 - 0.44 10.1 2.7 0.86 9.2 2.7 1.6 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family CDC45 PF02724.14 ORF82310 - 0.53 8.5 12.6 0.65 8.2 12.6 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF4672 PF15716.5 ORF82310 - 4.2 6.9 5.8 23 4.6 4.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4672) ALMT PF11744.8 ORF82310 - 4.7 5.9 5.9 7.1 5.3 5.9 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Syntaxin-18_N PF10496.9 ORF82008 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF82008 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF82008 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like Syntaxin-18_N PF10496.9 ORF79147 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF79147 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF79147 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like Zip PF02535.22 ORF7870 - 0.35 10.1 1.8 0.31 10.2 1.8 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF7870 - 4.3 6.0 7.6 5.7 5.6 7.6 1.2 1 0 0 1 1 1 0 Presenilin MORN_2 PF07661.13 ORF7870 - 4.3 7.9 9.5 3.3 8.3 0.9 3.5 3 0 0 3 3 3 0 MORN repeat variant S1 PF00575.23 ORF77888 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF77888 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain HHH_7 PF14635.6 ORF72521 - 0.2 12.0 0.0 0.33 11.3 0.0 1.3 1 0 0 1 1 1 0 Helix-hairpin-helix motif Zn-ribbon_8 PF09723.10 ORF69789 - 0.028 14.5 2.2 0.068 13.3 2.2 1.7 1 0 0 1 1 1 0 Zinc ribbon domain HypA PF01155.19 ORF69789 - 0.14 12.2 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ABC2_membrane_3 PF12698.7 ORF68451 - 7.4e-17 61.5 4.9 8.8e-17 61.2 4.9 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein Sigma_reg_N PF13800.6 ORF68451 - 0.16 12.3 1.0 20 5.6 0.1 2.5 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Syntaxin-18_N PF10496.9 ORF65191 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF65191 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF65191 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like S1 PF00575.23 ORF64638 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF64638 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain Rad60-SLD PF11976.8 ORF6326 - 1.9e-07 30.8 0.0 3e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 ORF6326 - 0.0049 16.6 0.0 0.0079 15.9 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family S1 PF00575.23 ORF63064 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF63064 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain S1 PF00575.23 ORF62761 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF62761 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain GAS PF13851.6 ORF56248 - 0.097 12.0 12.8 0.31 10.3 4.5 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Sec34 PF04136.15 ORF56248 - 0.22 11.4 1.9 4.3 7.2 0.0 2.7 1 1 0 2 2 2 0 Sec34-like family DUF4638 PF15472.6 ORF56248 - 0.35 10.6 6.8 0.59 9.8 6.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4638) DUF5082 PF16888.5 ORF56248 - 3 8.2 8.0 0.77 10.0 1.7 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) FAM76 PF16046.5 ORF56248 - 4.3 6.6 8.5 2.4 7.5 2.6 2.1 1 1 1 2 2 2 0 FAM76 protein WD40 PF00400.32 ORF5416 - 9e-39 130.8 31.1 1e-05 26.2 0.6 7.2 7 0 0 7 7 7 7 WD domain, G-beta repeat PALB2_WD40 PF16756.5 ORF5416 - 3.2e-08 32.9 18.1 0.00085 18.3 0.4 4.8 1 1 3 5 5 5 4 Partner and localizer of BRCA2 WD40 domain Nup160 PF11715.8 ORF5416 - 1.7e-06 27.0 14.0 0.0039 15.9 0.2 5.4 3 3 2 6 6 6 4 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF5416 - 0.071 11.9 2.0 1.4 7.6 0.2 2.9 1 1 3 4 4 4 0 Nup133 N terminal like ALS_ss_C PF10369.9 ORF5416 - 0.098 12.9 0.0 22 5.3 0.0 3.3 3 2 0 3 3 3 0 Small subunit of acetolactate synthase Rubis-subs-bind PF09273.11 ORF5416 - 0.19 12.4 0.0 4.2 8.1 0.0 2.8 3 2 1 4 4 4 0 Rubisco LSMT substrate-binding Bromodomain PF00439.25 ORF53689 - 4.7e-23 81.1 0.6 1.6e-21 76.1 0.3 2.4 2 0 0 2 2 2 1 Bromodomain Ank_2 PF12796.7 ORF53689 - 1.2e-14 54.6 0.4 2.9e-14 53.4 0.1 1.8 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF53689 - 3.7e-13 49.7 0.2 5.9e-11 42.7 0.1 3.2 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF53689 - 2.2e-10 39.8 0.1 0.00012 22.3 0.1 3.7 4 0 0 4 4 4 2 Ankyrin repeat Ank PF00023.30 ORF53689 - 3.5e-09 36.7 0.2 0.0019 18.6 0.1 4.0 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF53689 - 1.5e-07 31.6 0.1 0.0013 19.0 0.1 2.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) zf-LYAR PF08790.11 ORF5338 - 0.071 13.0 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 LYAR-type C2HC zinc finger Rtt106 PF08512.12 ORF53159 - 3.6e-15 56.2 0.6 5.6e-15 55.5 0.6 1.3 1 0 0 1 1 1 1 Histone chaperone Rttp106-like ATHILA PF03078.15 ORF53159 - 0.31 9.8 8.3 0.44 9.3 8.3 1.2 1 0 0 1 1 1 0 ATHILA ORF-1 family YL1 PF05764.13 ORF53159 - 2 8.5 22.8 0.077 13.1 15.0 2.0 2 0 0 2 2 2 0 YL1 nuclear protein 7TM_GPCR_Srh PF10318.9 ORF49557 - 0.033 13.2 0.1 0.059 12.4 0.1 1.3 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh MASE5 PF17178.4 ORF49557 - 0.26 11.1 0.1 0.26 11.1 0.1 2.3 2 1 1 3 3 3 0 Membrane-associated sensor DUF4149 PF13664.6 ORF49557 - 0.34 11.3 5.1 0.12 12.7 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4149) AA_permease PF00324.21 ORF49474 - 6e-69 232.9 20.6 6.7e-69 232.7 20.6 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF49474 - 6.3e-22 78.0 18.8 7.3e-22 77.8 18.8 1.0 1 0 0 1 1 1 1 Amino acid permease Bromodomain PF00439.25 ORF48288 - 4.7e-23 81.1 0.6 1.6e-21 76.1 0.3 2.4 2 0 0 2 2 2 1 Bromodomain Ank_2 PF12796.7 ORF48288 - 1.2e-14 54.6 0.4 2.9e-14 53.4 0.1 1.8 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF48288 - 3.7e-13 49.7 0.2 5.9e-11 42.7 0.1 3.2 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF48288 - 2.2e-10 39.8 0.1 0.00012 22.3 0.1 3.7 4 0 0 4 4 4 2 Ankyrin repeat Ank PF00023.30 ORF48288 - 3.5e-09 36.7 0.2 0.0019 18.6 0.1 4.0 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF48288 - 1.5e-07 31.6 0.1 0.0013 19.0 0.1 2.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) S1 PF00575.23 ORF39022 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF39022 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain FAST_1 PF06743.15 ORF34793 - 0.022 14.7 0.0 0.053 13.5 0.0 1.6 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 1 Asp PF00026.23 ORF33495 - 7.1e-14 51.9 0.1 8.5e-14 51.7 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF33495 - 0.14 11.9 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal PB1 PF00564.24 ORF29437 - 1.5e-07 31.2 0.2 4.3e-07 29.8 0.2 1.7 1 0 0 1 1 1 1 PB1 domain DegT_DnrJ_EryC1 PF01041.17 ORF28229 - 2.2e-75 254.3 0.0 2.4e-75 254.1 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 ORF28229 - 0.16 11.2 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase S1 PF00575.23 ORF2500 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF2500 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain Vint PF14623.6 ORF24561 - 9e-08 32.1 0.0 1.6e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 Hint-domain ubiquitin PF00240.23 ORF24561 - 0.16 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family Filament PF00038.21 ORF2447 - 0.16 11.5 32.8 0.68 9.5 3.5 2.0 1 1 1 2 2 2 0 Intermediate filament protein Helicase_C PF00271.31 ORF2254 - 2.1e-28 98.9 0.1 3e-28 98.4 0.1 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain LRR_4 PF12799.7 ORF2194 - 5.2e-07 29.9 24.8 0.0088 16.4 0.2 6.1 3 2 4 7 7 7 4 Leucine Rich repeats (2 copies) SCHIP-1 PF10148.9 ORF2194 - 0.066 12.8 0.6 0.13 11.9 0.6 1.4 1 0 0 1 1 1 0 Schwannomin-interacting protein 1 LRR_6 PF13516.6 ORF2194 - 0.31 11.2 15.3 20 5.5 2.6 5.6 6 0 0 6 6 6 0 Leucine Rich repeat LRR_8 PF13855.6 ORF2194 - 0.31 10.8 17.5 0.11 12.2 2.8 5.7 4 2 1 5 5 5 0 Leucine rich repeat LRR_2 PF07723.13 ORF2194 - 0.95 10.2 5.8 6.7 7.5 0.0 4.5 5 0 0 5 5 5 0 Leucine Rich Repeat LRR_1 PF00560.33 ORF2194 - 4.7 8.2 15.4 31 5.7 0.5 6.4 4 3 2 6 6 6 0 Leucine Rich Repeat ATP-synt_A PF00119.20 ORF20681 - 4.8e-56 190.0 21.6 5.8e-56 189.8 21.6 1.0 1 0 0 1 1 1 1 ATP synthase A chain DUF3333 PF11812.8 ORF20681 - 0.015 15.5 3.4 2 8.6 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3333) CHD5 PF04420.14 ORF20681 - 0.11 12.3 6.1 0.86 9.5 1.6 2.4 2 0 0 2 2 2 0 CHD5-like protein Dynein_C PF18199.1 ORF17166 - 0.0048 16.2 0.8 0.0069 15.6 0.8 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain HSBP1 PF06825.12 ORF17166 - 0.11 12.3 1.3 0.43 10.5 1.3 1.9 1 1 1 2 2 2 0 Heat shock factor binding protein 1 SUKH_6 PF14568.6 ORF17166 - 0.12 12.8 8.9 1.8 9.0 0.2 3.2 2 2 1 3 3 3 0 SMI1-KNR4 cell-wall Lge1 PF11488.8 ORF17166 - 1.2 9.3 6.7 0.43 10.8 1.6 2.8 3 0 0 3 3 3 0 Transcriptional regulatory protein LGE1 LigB PF02900.18 ORF14975 - 2.6e-25 89.0 0.0 3.2e-25 88.7 0.0 1.1 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase S1 PF00575.23 ORF11447 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF11447 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain cNMP_binding PF00027.29 ORF112366 - 0.0049 16.9 0.0 0.0087 16.1 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain TadF PF16964.5 ORF112366 - 0.21 11.3 0.1 0.3 10.8 0.1 1.2 1 0 0 1 1 1 0 Putative tight adherence pilin protein F Syntaxin-18_N PF10496.9 ORF110995 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF110995 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF110995 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like Cnn_1N PF07989.11 ORF107178 - 0.029 14.5 6.3 0.029 14.5 6.3 2.7 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 Vir_act_alpha_C PF10400.9 ORF107178 - 0.087 13.5 3.0 3 8.6 0.1 2.7 2 0 0 2 2 2 0 Virulence activator alpha C-term CCDC85 PF10226.9 ORF107178 - 0.74 9.5 10.1 0.065 12.9 4.0 2.2 2 1 1 3 3 3 0 CCDC85 family DUF1664 PF07889.12 ORF107178 - 3.4 7.7 7.9 0.7 9.9 2.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) IclR PF01614.18 ORF106758 - 1.8e-41 141.0 0.0 2.7e-41 140.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 ORF106758 - 1.8e-12 46.9 0.1 7.1e-12 44.9 0.0 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 ORF106758 - 0.0015 18.3 0.0 0.0045 16.8 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 ORF106758 - 0.0039 17.0 0.1 0.05 13.5 0.0 2.3 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 ORF106758 - 0.0076 15.8 0.0 0.038 13.6 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Dynein_C PF18199.1 ORF103030 - 0.0048 16.2 0.8 0.0069 15.6 0.8 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain HSBP1 PF06825.12 ORF103030 - 0.11 12.3 1.3 0.43 10.5 1.3 1.9 1 1 1 2 2 2 0 Heat shock factor binding protein 1 SUKH_6 PF14568.6 ORF103030 - 0.12 12.8 8.9 1.8 9.0 0.2 3.2 2 2 1 3 3 3 0 SMI1-KNR4 cell-wall Lge1 PF11488.8 ORF103030 - 1.2 9.3 6.7 0.43 10.8 1.6 2.8 3 0 0 3 3 3 0 Transcriptional regulatory protein LGE1 NAD_binding_10 PF13460.6 ORF102624 - 3.2e-37 128.2 3.6 4.5e-36 124.5 3.6 2.0 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 ORF102624 - 3.8e-12 46.3 0.1 5.8e-12 45.7 0.1 1.3 1 1 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 ORF102624 - 1.7e-08 34.2 0.1 3.2e-08 33.3 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF102624 - 4.9e-07 29.0 0.1 7.4e-07 28.4 0.1 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family KR PF08659.10 ORF102624 - 0.0002 21.4 1.1 0.00043 20.2 1.1 1.5 1 1 0 1 1 1 1 KR domain DapB_N PF01113.20 ORF102624 - 0.0053 16.9 2.2 0.011 15.9 1.7 1.8 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Polysacc_synt_2 PF02719.15 ORF102624 - 0.006 15.8 1.4 0.029 13.5 1.4 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein PAC2 PF09754.9 ORF102624 - 0.0065 16.5 0.0 0.026 14.6 0.0 1.8 1 1 1 3 3 3 1 PAC2 family RmlD_sub_bind PF04321.17 ORF102624 - 0.016 14.3 1.0 0.61 9.1 1.0 2.6 1 1 0 1 1 1 0 RmlD substrate binding domain Pkinase PF00069.25 NODE_26323_length_808_cov_80.940492_g20580_i0reverse_frame_1 - 1.6e-38 132.6 0.6 3.6e-38 131.4 0.0 1.9 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_26323_length_808_cov_80.940492_g20580_i0reverse_frame_1 - 3.5e-28 98.6 0.4 6.5e-28 97.7 0.0 1.7 2 1 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_26323_length_808_cov_80.940492_g20580_i0reverse_frame_1 - 5.6e-06 25.9 0.0 8.9e-06 25.2 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_26323_length_808_cov_80.940492_g20580_i0reverse_frame_1 - 0.073 11.8 0.7 0.13 11.0 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase Herpes_UL37_1 PF03970.13 NODE_26323_length_808_cov_80.940492_g20580_i0reverse_frame_1 - 0.085 12.0 0.0 0.73 9.0 0.0 2.0 1 1 1 2 2 2 0 Herpesvirus UL37 tegument protein SnAC PF14619.6 NODE_26323_length_808_cov_80.940492_g20580_i0reverse_frame_1 - 0.75 10.5 4.0 3.1 8.5 2.2 2.4 2 0 0 2 2 2 0 Snf2-ATP coupling, chromatin remodelling complex DUF3422 PF11902.8 NODE_26250_length_810_cov_2.592258_g20524_i0forward_frame_1 - 0.021 13.9 0.4 0.084 12.0 0.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3422) Mod_r PF07200.13 NODE_26184_length_811_cov_253.551546_g20245_i1forward_frame_2 - 0.024 14.7 15.3 0.58 10.3 7.3 2.6 2 1 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein DUF4407 PF14362.6 NODE_26184_length_811_cov_253.551546_g20245_i1forward_frame_2 - 0.027 13.8 10.4 0.036 13.4 10.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CREPT PF16566.5 NODE_26184_length_811_cov_253.551546_g20245_i1forward_frame_2 - 0.032 14.4 0.3 0.032 14.4 0.3 2.5 2 1 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Spc7 PF08317.11 NODE_26184_length_811_cov_253.551546_g20245_i1forward_frame_2 - 1.2 8.0 14.5 0.62 8.9 0.5 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein PI3K_P85_iSH2 PF16454.5 NODE_26184_length_811_cov_253.551546_g20245_i1forward_frame_2 - 1.2 8.7 9.0 4.2 6.9 0.2 2.4 2 1 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain FlgN PF05130.12 NODE_26184_length_811_cov_253.551546_g20245_i1forward_frame_2 - 1.3 9.6 18.3 0.22 12.0 9.1 2.4 2 1 0 2 2 2 0 FlgN protein FapA PF03961.13 NODE_26184_length_811_cov_253.551546_g20245_i1forward_frame_2 - 1.6 7.2 7.3 0.44 9.1 4.1 1.5 2 0 0 2 2 2 0 Flagellar Assembly Protein A DHR10 PF18595.1 NODE_26184_length_811_cov_253.551546_g20245_i1forward_frame_2 - 4.4 7.4 25.4 6.8 6.8 4.5 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain UPF0242 PF06785.11 NODE_26184_length_811_cov_253.551546_g20245_i1forward_frame_2 - 5.4 7.1 19.4 0.57 10.3 1.3 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus SCAB_CC PF16712.5 NODE_26168_length_812_cov_4.149292_g20457_i0reverse_frame_3 - 0.0098 15.7 1.4 0.016 15.0 1.4 1.4 1 0 0 1 1 1 1 Coiled-coil regions of plant-specific actin-binding protein DUF1939 PF09154.10 NODE_26168_length_812_cov_4.149292_g20457_i0reverse_frame_3 - 0.22 11.7 0.7 0.42 10.8 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1939) Vpu PF00558.19 NODE_26168_length_812_cov_4.149292_g20457_i0reverse_frame_3 - 5.1 6.9 6.3 2.7 7.8 3.5 1.9 1 1 0 1 1 1 0 Vpu protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks62.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks62.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks62.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks62.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:12:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- KELK PF15796.5 NODE_26167_length_812_cov_4.213642_g20456_i0reverse_frame_3 - 0.18 12.3 13.7 0.13 12.7 4.4 2.7 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF745 PF05335.13 NODE_26167_length_812_cov_4.213642_g20456_i0reverse_frame_3 - 3.1 7.5 10.0 4.6 6.9 9.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF745) Siva PF05458.12 NODE_26156_length_812_cov_109.227799_g20445_i0reverse_frame_2 - 0.16 11.6 6.1 0.28 10.8 6.1 1.3 1 0 0 1 1 1 0 Cd27 binding protein (Siva) TPR_14 PF13428.6 NODE_26156_length_812_cov_109.227799_g20445_i0forward_frame_2 - 0.047 14.5 0.5 4.6 8.3 0.2 3.1 3 1 0 3 3 3 0 Tetratricopeptide repeat YEATS PF03366.16 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_3 - 9.3e-21 73.6 0.1 2.2e-20 72.4 0.1 1.7 1 0 0 1 1 1 1 YEATS family zf-C3HC4 PF00097.25 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.00012 21.8 7.3 0.00024 20.9 7.3 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.00018 21.6 5.8 0.0003 20.9 5.8 1.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.00026 20.8 6.4 0.00026 20.8 6.4 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.00062 20.0 4.3 0.0013 19.1 4.3 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.00084 19.1 1.8 0.0016 18.2 1.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.0012 18.7 3.2 0.0023 17.7 3.2 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-MIZ PF02891.20 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.024 14.4 3.3 0.046 13.5 3.3 1.5 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger zf-RING_UBOX PF13445.6 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.024 14.7 1.3 0.041 13.9 0.6 1.9 1 1 0 1 1 1 0 RING-type zinc-finger Rad50_zn_hook PF04423.14 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.039 13.8 0.6 0.039 13.8 0.6 2.2 2 1 0 2 2 2 0 Rad50 zinc hook motif zf-RING_4 PF14570.6 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 0.2 11.5 2.7 0.66 9.8 2.7 2.0 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_5 PF14634.6 NODE_26149_length_812_cov_218.687259_g20438_i0reverse_frame_2 - 2.4 8.2 5.6 13 5.8 5.8 2.1 1 1 1 2 2 2 0 zinc-RING finger domain FAM209 PF15206.6 NODE_26149_length_812_cov_218.687259_g20438_i0forward_frame_3 - 0.076 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 FAM209 family TMEM144 PF07857.12 NODE_26143_length_812_cov_338.633205_g20180_i1reverse_frame_2 - 2.4e-09 36.6 0.1 3.4e-09 36.1 0.1 1.1 1 0 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Sugar_transport PF06800.12 NODE_26143_length_812_cov_338.633205_g20180_i1reverse_frame_2 - 0.032 13.6 0.3 0.032 13.6 0.3 1.4 2 0 0 2 2 2 0 Sugar transport protein SDA1 PF05285.12 NODE_26135_length_812_cov_2130.492921_g20427_i0reverse_frame_3 - 1.9 7.8 11.6 2.2 7.6 11.6 1.1 1 0 0 1 1 1 0 SDA1 CDC45 PF02724.14 NODE_26135_length_812_cov_2130.492921_g20427_i0reverse_frame_3 - 4.1 5.6 6.3 4.9 5.3 6.3 1.2 1 0 0 1 1 1 0 CDC45-like protein Pkinase_Tyr PF07714.17 NODE_26120_length_813_cov_64.484576_g20414_i0forward_frame_3 - 0.028 13.7 0.2 0.045 13.0 0.2 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase Kinesin PF00225.23 ORF99510 - 3.6e-49 167.5 1.8 4.5e-49 167.2 1.8 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF99510 - 3.4e-22 79.0 1.1 3.4e-22 79.0 1.1 1.7 2 1 0 2 2 2 1 Microtubule binding CDC50 PF03381.15 ORF98260 - 0.03 13.8 0.4 0.043 13.3 0.4 1.1 1 0 0 1 1 1 0 LEM3 (ligand-effect modulator 3) family / CDC50 family PALP PF00291.25 ORF97683 - 1e-24 87.5 0.0 1.1e-24 87.4 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme tRNA-synt_2b PF00587.25 ORF97069 - 2.2e-36 125.5 0.0 2.7e-36 125.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) TPT PF03151.16 ORF969 - 1.6e-68 231.2 9.5 1.8e-68 231.0 9.5 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF969 - 1e-13 51.6 20.9 2.9e-07 30.7 4.9 2.4 3 0 0 3 3 3 2 EamA-like transporter family MORN PF02493.20 ORF96534 - 2.3e-52 171.8 76.1 8.9e-08 31.6 1.3 9.9 10 0 0 10 10 10 9 MORN repeat C2 PF00168.30 ORF96308 - 0.0045 17.3 0.2 0.2 12.0 0.0 2.5 3 0 0 3 3 3 2 C2 domain CNOT1_TTP_bind PF16417.5 ORF93751 - 0.16 11.2 0.0 0.34 10.1 0.0 1.5 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Fez1 PF06818.15 ORF93496 - 0.39 11.1 23.1 0.091 13.2 9.1 2.1 1 1 1 2 2 2 0 Fez1 ATG16 PF08614.11 ORF93496 - 0.67 10.1 30.4 1.7 8.8 30.4 1.6 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Colipase-like PF15083.6 ORF93496 - 1 9.5 5.3 2.3 8.4 1.0 2.3 2 0 0 2 2 2 0 Colipase-like DUF4201 PF13870.6 ORF93496 - 2.5 7.8 23.7 2.9 7.6 5.2 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) SlyX PF04102.12 ORF93496 - 2.7 8.7 25.2 0.4 11.3 1.7 3.8 1 1 3 4 4 4 0 SlyX DUF3552 PF12072.8 ORF93496 - 7.3 5.9 32.6 1.3 8.4 17.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) aGPT-Pplase3 PF18746.1 ORF90658 - 0.022 14.1 2.2 0.042 13.2 2.2 1.4 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 ERM PF00769.19 ORF90658 - 0.033 14.0 12.8 0.041 13.7 12.8 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family OrfA PF17495.2 ORF90658 - 0.036 14.2 3.5 3.8 7.7 1.5 2.4 1 1 1 2 2 2 0 Vpr-like OrfA kleA_kleC PF17383.2 ORF90658 - 0.11 12.8 0.7 1 9.8 0.3 2.5 2 0 0 2 2 2 0 Uncharacterized KorC regulated protein A DUF2968 PF11180.8 ORF90658 - 0.61 9.7 7.7 2.6 7.6 0.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) BST2 PF16716.5 ORF90658 - 3.1 8.4 20.0 0.3 11.7 5.3 3.4 2 1 0 3 3 3 0 Bone marrow stromal antigen 2 NPV_P10 PF05531.12 ORF90658 - 3.4 8.2 10.0 7.2 7.2 0.5 3.5 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein UPF0242 PF06785.11 ORF90658 - 6.4 6.8 17.5 23 5.0 0.1 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Troponin PF00992.20 ORF90658 - 7.4 6.9 18.9 3.8 7.8 1.8 3.2 2 2 1 3 3 3 0 Troponin DUF641 PF04859.12 ORF90658 - 8.3 6.8 12.9 1.3 9.4 5.9 2.6 2 1 1 3 3 3 0 Plant protein of unknown function (DUF641) DUF3450 PF11932.8 ORF90658 - 9.7 5.4 12.7 5.8 6.2 3.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Pkinase PF00069.25 ORF89635 - 1.8e-16 60.3 0.0 2.3e-16 60.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF89635 - 1.3e-07 30.8 0.1 1.8e-07 30.3 0.1 1.2 1 0 0 1 1 1 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF89635 - 3e-05 23.5 0.0 3.4e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Glyco_transf_8C PF08437.10 ORF89635 - 0.011 15.8 0.2 0.027 14.5 0.2 1.6 1 0 0 1 1 1 0 Glycosyl transferase family 8 C-terminal DUF4116 PF13475.6 ORF89173 - 5.2e-24 83.7 0.0 1.4e-15 56.7 0.0 3.3 2 1 1 4 4 4 3 Domain of unknown function (DUF4116) ubiquitin PF00240.23 ORF89173 - 0.0054 16.5 0.0 0.0086 15.8 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF89173 - 0.13 12.7 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-like domain PP2C PF00481.21 ORF87417 - 4.6e-47 160.8 0.8 5.6e-47 160.5 0.8 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF87417 - 4e-10 39.7 1.1 1.2e-09 38.2 1.1 1.7 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF87417 - 0.00024 21.1 0.4 0.066 13.1 0.1 2.2 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) aGPT-Pplase3 PF18746.1 ORF84285 - 0.022 14.1 2.2 0.042 13.2 2.2 1.4 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 ERM PF00769.19 ORF84285 - 0.033 14.0 12.8 0.041 13.7 12.8 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family OrfA PF17495.2 ORF84285 - 0.036 14.2 3.5 3.8 7.7 1.5 2.4 1 1 1 2 2 2 0 Vpr-like OrfA kleA_kleC PF17383.2 ORF84285 - 0.11 12.8 0.7 1 9.8 0.3 2.5 2 0 0 2 2 2 0 Uncharacterized KorC regulated protein A DUF2968 PF11180.8 ORF84285 - 0.61 9.7 7.7 2.6 7.6 0.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) BST2 PF16716.5 ORF84285 - 3.1 8.4 20.0 0.3 11.7 5.3 3.4 2 1 0 3 3 3 0 Bone marrow stromal antigen 2 NPV_P10 PF05531.12 ORF84285 - 3.4 8.2 10.0 7.2 7.2 0.5 3.5 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein UPF0242 PF06785.11 ORF84285 - 6.4 6.8 17.5 23 5.0 0.1 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Troponin PF00992.20 ORF84285 - 7.4 6.9 18.9 3.8 7.8 1.8 3.2 2 2 1 3 3 3 0 Troponin DUF641 PF04859.12 ORF84285 - 8.3 6.8 12.9 1.3 9.4 5.9 2.6 2 1 1 3 3 3 0 Plant protein of unknown function (DUF641) DUF3450 PF11932.8 ORF84285 - 9.7 5.4 12.7 5.8 6.2 3.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Podoplanin PF05808.11 ORF83577 - 0.0035 17.5 0.1 0.0063 16.6 0.1 1.3 1 0 0 1 1 1 1 Podoplanin Rax2 PF12768.7 ORF83577 - 0.015 14.8 0.1 0.093 12.2 0.0 2.0 2 0 0 2 2 2 0 Cortical protein marker for cell polarity SPX PF03105.19 ORF83577 - 0.035 14.0 2.8 0.039 13.9 2.8 1.1 1 0 0 1 1 1 0 SPX domain Macoilin PF09726.9 ORF83577 - 0.72 8.3 2.6 0.94 8.0 2.6 1.1 1 0 0 1 1 1 0 Macoilin family Leu_zip PF15294.6 ORF74722 - 3e-16 59.8 33.5 1.1e-11 44.8 19.0 2.0 1 1 1 2 2 2 2 Leucine zipper PKcGMP_CC PF16808.5 ORF74722 - 0.015 15.2 1.1 0.015 15.2 1.1 4.1 4 1 1 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF4070 PF13282.6 ORF74722 - 0.066 13.3 2.8 0.12 12.4 0.2 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4070) DUF1319 PF07028.11 ORF74722 - 0.16 12.2 15.5 0.26 11.5 0.1 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1319) Cep57_CLD_2 PF14197.6 ORF74722 - 0.75 9.9 12.2 0.62 10.2 3.1 3.7 2 2 0 2 2 2 0 Centrosome localisation domain of PPC89 DUF1664 PF07889.12 ORF74722 - 2.6 8.1 17.7 0.055 13.5 3.3 3.4 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 ORF74722 - 2.9 8.1 25.0 0.91 9.7 7.3 3.1 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Thioredoxin_7 PF13899.6 ORF66827 - 0.064 13.5 0.4 11 6.2 0.2 2.4 2 0 0 2 2 2 0 Thioredoxin-like Syntaxin PF00804.25 ORF66827 - 0.19 11.4 10.7 0.12 12.1 1.5 2.2 2 0 0 2 2 2 0 Syntaxin EccE PF11203.8 ORF66827 - 0.23 11.8 5.8 0.43 10.9 5.8 1.5 1 0 0 1 1 1 0 Putative type VII ESX secretion system translocon, EccE Occludin_ELL PF07303.13 ORF66827 - 0.8 10.5 5.7 6.7 7.5 1.6 2.5 2 0 0 2 2 2 0 Occludin homology domain CENP-F_leu_zip PF10473.9 ORF66827 - 1.4 9.0 21.3 0.39 10.7 4.4 2.8 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Nsp1_C PF05064.13 ORF66827 - 1.9 8.3 8.8 1.6 8.5 0.5 2.3 1 1 1 2 2 2 0 Nsp1-like C-terminal region Rab5-bind PF09311.11 ORF66827 - 3.7 6.8 21.3 1.5 8.2 8.6 2.1 1 1 1 2 2 2 0 Rabaptin-like protein FlaC_arch PF05377.11 ORF66827 - 4.2 7.8 5.3 31 5.0 0.1 3.1 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) DUF1664 PF07889.12 ORF66827 - 5.9 7.0 5.5 16 5.6 0.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF3584 PF12128.8 ORF66827 - 6.8 4.1 19.7 10 3.4 19.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) THOC7 PF05615.13 ORF66827 - 8.3 6.7 22.2 0.77 10.0 4.5 3.1 2 1 1 3 3 3 0 Tho complex subunit 7 Ribosomal_S2 PF00318.20 ORF65633 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF65633 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF65633 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF65633 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF65633 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF65633 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF65633 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF65633 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family PPR PF01535.20 ORF64533 - 2.2e-06 27.5 0.3 0.026 14.8 0.0 4.0 4 0 0 4 4 4 1 PPR repeat PPR_2 PF13041.6 ORF64533 - 8.9e-06 25.8 0.1 0.0059 16.8 0.0 3.7 3 1 1 4 4 4 2 PPR repeat family PPR_1 PF12854.7 ORF64533 - 0.0029 17.3 0.0 0.0069 16.1 0.0 1.7 1 0 0 1 1 1 1 PPR repeat PPR_3 PF13812.6 ORF64533 - 0.016 15.3 0.0 0.32 11.1 0.0 2.6 3 0 0 3 3 3 0 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF64533 - 0.072 12.4 0.4 0.14 11.5 0.3 1.6 1 1 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Ribosomal_S2 PF00318.20 ORF64357 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF64357 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF64357 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF64357 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF64357 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF64357 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF64357 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF64357 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family MORN PF02493.20 ORF62892 - 4.9e-39 129.9 61.0 1.4e-07 30.9 0.4 9.2 9 0 0 9 9 9 8 MORN repeat AKAP7_NLS PF10469.9 ORF62892 - 0.016 15.1 0.4 0.022 14.7 0.4 1.1 1 0 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain KH_8 PF17903.1 ORF62558 - 7.3e-17 61.2 0.1 1.7e-16 60.1 0.1 1.7 1 0 0 1 1 1 1 Krr1 KH1 domain KH_1 PF00013.29 ORF62558 - 0.00034 20.4 0.2 0.00072 19.3 0.2 1.5 1 0 0 1 1 1 1 KH domain PAC4 PF16093.5 ORF62558 - 0.15 12.2 0.3 0.4 10.9 0.3 1.6 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Calc_CGRP_IAPP PF00214.19 ORF62558 - 4.2 7.8 7.3 46 4.4 7.3 2.2 1 1 0 1 1 1 0 Calcitonin / CGRP / IAPP family PseudoU_synth_1 PF01416.20 ORF58341 - 1.2e-40 138.3 0.1 2.3e-28 98.8 0.0 2.1 2 0 0 2 2 2 2 tRNA pseudouridine synthase DUF2344 PF10105.9 ORF58341 - 0.15 11.9 0.0 0.21 11.4 0.0 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) Hydrolase PF00702.26 ORF58158 - 3.8e-16 60.0 4.1 1.8e-15 57.8 4.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF58158 - 3.8e-06 26.8 0.8 0.0012 18.7 0.2 2.1 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase EIID-AGA PF03613.14 ORF57965 - 3.5e-90 301.8 4.8 3.9e-90 301.6 4.8 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component Ndc1_Nup PF09531.10 ORF57965 - 2.9 6.5 5.9 3.8 6.1 5.6 1.5 1 1 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Chorion_3 PF05387.11 ORF55614 - 0.45 10.1 2.0 0.65 9.6 2.0 1.2 1 0 0 1 1 1 0 Chorion family 3 Rieske PF00355.26 ORF52554 - 3.6e-11 42.9 0.1 7.1e-11 41.9 0.1 1.5 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain HSP90 PF00183.18 ORF50514 - 4.8e-14 52.2 5.4 6.3e-14 51.8 5.4 1.1 1 0 0 1 1 1 1 Hsp90 protein DUF1272 PF06906.11 ORF50514 - 0.0095 16.0 3.8 0.018 15.1 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) DUF1035 PF06281.12 ORF5010 - 0.038 14.0 0.2 0.12 12.4 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1035) Glyco_hydro_2_C PF02836.17 ORF49688 - 2.7e-11 43.1 0.1 3.6e-11 42.7 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain IPT PF01745.16 ORF49688 - 0.0094 15.4 0.0 0.016 14.6 0.0 1.4 1 1 0 1 1 1 1 Isopentenyl transferase DnaJ PF00226.31 ORF46919 - 0.0073 16.4 0.0 0.015 15.4 0.0 1.5 1 0 0 1 1 1 1 DnaJ domain DUF349 PF03993.12 ORF46919 - 1.8 8.9 6.4 0.45 10.8 1.6 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF349) Ribosomal_S2 PF00318.20 ORF46154 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF46154 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF46154 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF46154 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF46154 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF46154 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF46154 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF46154 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family Snf7 PF03357.21 ORF45746 - 1.7e-06 27.8 8.1 2.4e-06 27.3 8.1 1.2 1 0 0 1 1 1 1 Snf7 Pex14_N PF04695.13 ORF45746 - 0.38 11.4 8.7 0.6 10.7 8.7 1.3 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Ribosomal_S2 PF00318.20 ORF45639 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF45639 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF45639 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF45639 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF45639 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF45639 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF45639 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF45639 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family RCC1_2 PF13540.6 ORF40095 - 6e-13 48.2 16.8 0.038 13.8 0.1 6.9 5 1 1 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat bPH_6 PF10756.9 ORF40095 - 0.17 12.0 3.4 15 5.7 0.1 3.3 4 0 0 4 4 4 0 Bacterial PH domain Pirin PF02678.16 ORF39473 - 2e-27 95.3 0.5 3.1e-27 94.7 0.5 1.2 1 0 0 1 1 1 1 Pirin Pirin_C_2 PF17954.1 ORF39473 - 1.4e-10 41.2 0.0 3.7e-10 39.8 0.0 1.7 2 0 0 2 2 2 1 Quercetinase C-terminal cupin domain Cupin_2 PF07883.11 ORF39473 - 9.3e-07 28.5 0.1 1e-05 25.2 0.2 2.1 2 0 0 2 2 2 1 Cupin domain AMPK1_CBM PF16561.5 ORF39473 - 0.017 15.4 0.0 3.8 7.8 0.0 2.7 2 1 1 3 3 3 0 Glycogen recognition site of AMP-activated protein kinase BRO1 PF03097.18 ORF38572 - 3.3e-45 154.6 4.6 4e-45 154.3 4.6 1.0 1 0 0 1 1 1 1 BRO1-like domain Kinesin PF00225.23 ORF34997 - 3.6e-49 167.5 1.8 4.5e-49 167.2 1.8 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF34997 - 3.4e-22 79.0 1.1 3.4e-22 79.0 1.1 1.7 2 1 0 2 2 2 1 Microtubule binding CLLAC PF15675.5 ORF33002 - 0.037 13.6 0.7 0.037 13.6 0.7 2.7 3 0 0 3 3 3 0 CLLAC-motif containing domain Peptidase_S74 PF13884.6 ORF32001 - 1.8e-12 47.4 0.0 1e-11 45.0 0.0 2.2 1 1 0 1 1 1 1 Chaperone of endosialidase DUF3450 PF11932.8 ORF32001 - 0.029 13.7 1.0 0.046 13.0 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Phasin PF05597.11 ORF31670 - 0.016 15.2 0.1 0.028 14.4 0.1 1.3 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF1415 PF07209.12 ORF29253 - 1.9e-23 83.1 0.0 2.5e-15 56.6 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF1415) Ribosomal_S2 PF00318.20 ORF25915 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF25915 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF25915 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF25915 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF25915 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF25915 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF25915 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF25915 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family KASH_CCD PF14662.6 ORF21740 - 0.0023 17.8 16.9 0.0024 17.7 15.6 1.6 1 1 1 2 2 2 1 Coiled-coil region of CCDC155 or KASH UVR PF02151.19 ORF21740 - 0.021 14.6 3.7 0.027 14.2 0.1 2.8 2 0 0 2 2 2 0 UvrB/uvrC motif DUF979 PF06166.12 ORF21740 - 0.28 10.3 0.0 0.41 9.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF979) DUF4047 PF13256.6 ORF21740 - 0.48 10.6 5.8 0.33 11.1 3.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) DUF3450 PF11932.8 ORF21740 - 2.3 7.5 19.7 0.13 11.6 12.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) ZapB PF06005.12 ORF21740 - 7.6 7.1 23.5 0.22 12.0 14.2 2.8 2 1 0 2 2 2 0 Cell division protein ZapB PS-DH PF14765.6 ORF2145 - 1.1e-06 28.1 0.1 1.9e-06 27.4 0.1 1.4 1 0 0 1 1 1 1 Polyketide synthase dehydratase HSP90 PF00183.18 ORF19384 - 4.8e-14 52.2 5.4 6.3e-14 51.8 5.4 1.1 1 0 0 1 1 1 1 Hsp90 protein DUF1272 PF06906.11 ORF19384 - 0.0095 16.0 3.8 0.018 15.1 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) Glyco_hydro_2_C PF02836.17 ORF1933 - 2.7e-11 43.1 0.1 3.6e-11 42.7 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain IPT PF01745.16 ORF1933 - 0.0094 15.4 0.0 0.016 14.6 0.0 1.4 1 1 0 1 1 1 1 Isopentenyl transferase Na_H_Exchanger PF00999.21 ORF12782 - 0.0013 17.6 3.3 0.0015 17.4 3.3 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family PLA2_B PF01735.18 ORF12782 - 0.026 13.0 1.8 0.034 12.5 1.8 1.2 1 0 0 1 1 1 0 Lysophospholipase catalytic domain Mhr1 PF12829.7 ORF12782 - 0.11 12.6 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulation of mitochondrial recombination EnY2 PF10163.9 ORF12782 - 0.13 12.7 1.5 0.82 10.1 0.1 2.6 3 0 0 3 3 3 0 Transcription factor e(y)2 17kDa_Anti_2 PF16998.5 ORF112463 - 0.033 14.1 2.3 1.7 8.6 0.6 2.3 2 0 0 2 2 2 0 17 kDa outer membrane surface antigen DAGAT PF03982.13 ORF110220 - 9e-16 57.6 0.0 3.8e-15 55.6 0.0 1.7 1 1 0 1 1 1 1 Diacylglycerol acyltransferase Cas6_N PF17952.1 ORF109171 - 0.0076 16.5 4.0 0.057 13.7 0.3 3.1 2 1 1 3 3 3 1 Cas6 N-terminal domain Laminin_G_3 PF13385.6 ORF107034 - 9.3e-07 29.1 0.1 1.2e-06 28.7 0.1 1.2 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Hydrolase_3 PF08282.12 ORF105752 - 1.8e-67 227.8 0.0 2e-67 227.6 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 ORF105752 - 6.6e-16 58.6 0.0 3.9e-08 33.1 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 ORF105752 - 3.6e-09 37.2 4.5 8.2e-07 29.5 4.5 3.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF105752 - 0.00012 22.2 0.0 0.0019 18.3 0.0 2.4 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 ORF105752 - 0.00098 19.3 0.3 0.023 14.8 0.0 2.7 2 1 1 3 3 3 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF105752 - 0.0012 19.3 0.8 1.1 9.6 0.0 3.0 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF105752 - 0.016 15.3 0.2 0.11 12.6 0.1 2.2 2 0 0 2 2 2 0 HAD-hyrolase-like ATP-synt_ab PF00006.25 ORF105584 - 1e-49 169.1 0.0 1.7e-49 168.4 0.0 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain AI-2E_transport PF01594.16 ORF104865 - 7.2e-70 235.7 23.0 8e-70 235.6 23.0 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF4577 PF15145.6 ORF104865 - 0.29 11.2 1.5 0.34 10.9 0.4 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4577) Cellulase PF00150.18 ORF100295 - 7.6e-35 120.7 0.4 9.6e-35 120.4 0.4 1.1 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) DUSP PF06337.12 NODE_26453_length_805_cov_60.597403_g20693_i0reverse_frame_1 - 1.5e-13 51.2 3.8 1.7e-13 51.0 2.0 2.0 2 0 0 2 2 2 1 DUSP domain LytTR PF04397.15 NODE_26451_length_805_cov_65.410390_g20691_i0reverse_frame_1 - 0.16 12.2 0.9 0.84 9.9 0.4 2.1 1 1 1 2 2 2 0 LytTr DNA-binding domain Flu_M1 PF00598.19 NODE_26410_length_806_cov_85.365759_g20657_i0forward_frame_1 - 0.014 14.9 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 Influenza Matrix protein (M1) PLDc_N PF13396.6 NODE_26410_length_806_cov_85.365759_g20657_i0forward_frame_1 - 2.6 8.0 4.8 1.4 8.9 0.1 2.2 2 0 0 2 2 2 0 Phospholipase_D-nuclease N-terminal K_oxygenase PF13434.6 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 8.1e-16 58.1 2.1 3.5e-14 52.7 0.7 2.1 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 3e-14 52.9 0.0 5.9e-10 38.9 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 1.7e-13 50.6 0.1 7.5e-11 41.8 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 6.5e-11 41.3 0.3 5.8e-07 28.3 0.1 2.0 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like NAD_binding_7 PF13241.6 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 0.00022 21.6 0.0 0.0008 19.8 0.0 1.9 1 1 0 1 1 1 1 Putative NAD(P)-binding Pyr_redox PF00070.27 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 0.00053 20.5 0.0 0.0019 18.7 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Cuticle_1 PF08140.11 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 0.0076 16.3 0.1 0.78 9.8 0.0 2.6 2 0 0 2 2 2 1 Crustacean cuticle protein repeat 3HCDH_N PF02737.18 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 0.0086 16.0 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IgGFc_binding PF17517.2 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 0.016 14.5 0.3 0.027 13.7 0.3 1.3 1 0 0 1 1 1 0 IgGFc binding protein Shikimate_DH PF01488.20 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 0.019 15.0 0.0 0.037 14.1 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_9 PF13454.6 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 0.038 14.0 0.6 0.36 10.8 0.3 2.7 2 1 0 2 2 2 0 FAD-NAD(P)-binding 2-Hacid_dh_C PF02826.19 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 0.047 13.1 0.0 0.077 12.3 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 NODE_26372_length_806_cov_4778.859922_g20623_i0forward_frame_1 - 0.099 12.2 0.0 0.25 10.9 0.0 1.7 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain SDA1 PF05285.12 NODE_26304_length_808_cov_2141.469599_g20427_i1forward_frame_3 - 1.1 8.6 13.1 1.5 8.2 13.1 1.2 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 NODE_26304_length_808_cov_2141.469599_g20427_i1forward_frame_3 - 5.9 5.0 13.9 7.2 4.7 13.9 1.1 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_26304_length_808_cov_2141.469599_g20427_i1forward_frame_3 - 6.3 5.0 7.3 7.6 4.7 7.3 1.2 1 0 0 1 1 1 0 CDC45-like protein Takusan PF04822.13 NODE_26290_length_809_cov_65.342377_g20556_i0reverse_frame_3 - 0.14 12.1 0.3 0.23 11.3 0.3 1.3 1 0 0 1 1 1 0 Takusan HSP33 PF01430.19 NODE_26245_length_810_cov_51.094194_g20519_i0reverse_frame_2 - 0.029 13.8 1.0 0.92 8.9 0.1 2.2 1 1 1 2 2 2 0 Hsp33 protein EF-hand_1 PF00036.32 ORF99999 - 2e-25 86.4 18.5 4.3e-07 29.0 0.1 6.0 6 1 0 6 6 6 5 EF hand EF-hand_6 PF13405.6 ORF99999 - 3.6e-22 76.4 14.4 0.00012 21.7 0.1 5.8 5 1 0 5 5 5 5 EF-hand domain EF-hand_7 PF13499.6 ORF99999 - 4.1e-20 72.0 13.9 3.8e-09 36.9 0.9 3.4 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF99999 - 2.8e-13 48.7 15.6 0.0004 19.8 0.0 5.7 5 0 0 5 5 5 5 EF hand EF-hand_8 PF13833.6 ORF99999 - 5.2e-11 42.2 13.2 4.4e-06 26.4 0.2 5.2 4 1 1 5 5 5 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF99999 - 0.00022 21.5 0.9 0.12 12.7 0.0 3.4 3 1 0 3 3 3 1 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF99999 - 0.0052 16.7 5.2 0.62 10.0 0.0 4.1 3 2 1 4 4 4 1 Caleosin related protein EF-hand_4 PF12763.7 ORF99999 - 0.026 14.5 2.1 0.21 11.5 0.1 2.6 2 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 ORF99999 - 0.44 10.8 3.7 0.5 10.6 0.0 2.8 4 0 0 4 4 4 0 Dockerin type I domain Pkinase PF00069.25 ORF99449 - 1.2e-34 119.8 0.0 1.5e-34 119.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF99449 - 1.8e-12 47.1 0.0 2.5e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF99449 - 0.0017 17.2 0.0 0.0024 16.7 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF99449 - 0.025 14.5 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Sugar_transport PF06800.12 ORF98076 - 1.6e-05 24.4 4.3 1.6e-05 24.4 4.3 1.9 2 0 0 2 2 2 1 Sugar transport protein TMEM144 PF07857.12 ORF98076 - 0.0017 17.4 0.4 0.0017 17.4 0.4 1.7 3 0 0 3 3 3 1 Transmembrane family, TMEM144 of transporters DUF4064 PF13273.6 ORF98076 - 0.0056 16.9 10.6 1.1 9.5 0.3 3.1 2 1 0 2 2 2 2 Protein of unknown function (DUF4064) EamA PF00892.20 ORF98076 - 0.089 13.0 20.0 0.023 14.8 8.0 3.2 2 1 0 3 3 3 0 EamA-like transporter family PX PF00787.24 ORF95478 - 4.9e-07 29.7 1.6 7.2e-07 29.2 0.1 2.1 3 0 0 3 3 3 1 PX domain Spore_II_R PF09551.10 ORF95478 - 0.069 13.6 0.6 0.069 13.6 0.6 2.2 2 0 0 2 2 2 0 Stage II sporulation protein R (spore_II_R) Methyltransf_11 PF08241.12 ORF90408 - 7.8e-19 68.1 0.0 1.6e-18 67.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF90408 - 2.6e-16 60.1 0.0 4.6e-16 59.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF90408 - 1.6e-14 53.8 0.0 2.4e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 ORF90408 - 5.1e-13 49.1 0.0 7.9e-13 48.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF90408 - 1e-09 39.0 0.0 2.1e-09 38.0 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF90408 - 1.8e-09 37.7 0.0 2.6e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 ORF90408 - 1.4e-05 25.1 0.0 0.014 15.3 0.0 2.1 2 0 0 2 2 2 2 Hypothetical methyltransferase Methyltransf_4 PF02390.17 ORF90408 - 0.0018 17.8 0.0 0.012 15.1 0.0 2.1 1 1 0 1 1 1 1 Putative methyltransferase MetW PF07021.12 ORF90408 - 0.0019 17.8 0.0 0.0056 16.3 0.0 1.7 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.14 ORF90408 - 0.01 15.4 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Pox_MCEL PF03291.16 ORF90408 - 0.19 10.8 0.0 1.6 7.8 0.0 1.9 1 1 0 1 1 1 0 mRNA capping enzyme Caps_synth PF05704.12 ORF83689 - 1.8e-15 57.1 0.1 4.1e-14 52.6 0.0 2.1 2 0 0 2 2 2 2 Capsular polysaccharide synthesis protein Gly_transf_sug PF04488.15 ORF83689 - 1.2e-06 29.0 0.0 7.3e-06 26.5 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase sugar-binding region containing DXD motif DNA_methylase PF00145.17 ORF83355 - 0.037 13.4 1.1 0.047 13.0 1.1 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase UBA PF00627.31 ORF83179 - 0.00057 19.7 0.0 0.0023 17.8 0.0 2.0 2 0 0 2 2 2 1 UBA/TS-N domain DUF3482 PF11981.8 ORF83179 - 0.005 16.3 1.2 0.005 16.3 1.2 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF3482) GAS PF13851.6 ORF83179 - 0.035 13.4 3.0 0.059 12.7 3.0 1.3 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Geminin PF07412.12 ORF83179 - 0.041 13.6 0.9 0.041 13.6 0.9 1.8 2 0 0 2 2 2 0 Geminin CARD_2 PF16739.5 ORF83179 - 0.058 13.4 1.3 0.64 10.1 0.0 2.8 3 0 0 3 3 3 0 Caspase recruitment domain H2TH PF06831.14 ORF80311 - 2.3e-33 114.1 0.0 3.4e-33 113.5 0.0 1.3 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain Fapy_DNA_glyco PF01149.24 ORF80311 - 5e-32 110.9 0.0 1.5e-31 109.4 0.0 1.7 2 0 0 2 2 2 1 Formamidopyrimidine-DNA glycosylase N-terminal domain zf-FPG_IleRS PF06827.14 ORF80311 - 8.7e-10 38.3 4.6 1.7e-09 37.4 4.6 1.5 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS Auto_anti-p27 PF06677.12 ORF80311 - 0.011 15.9 1.8 0.022 14.9 1.8 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-dskA_traR PF01258.17 ORF80311 - 0.065 13.2 2.3 0.11 12.4 2.3 1.4 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger zf-B_box PF00643.24 ORF80311 - 0.65 10.2 2.8 3 8.1 2.8 2.0 1 1 0 1 1 1 0 B-box zinc finger Metallophos PF00149.28 ORF76074 - 6.2e-38 131.3 0.1 7.5e-38 131.1 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF76074 - 8.5e-23 80.5 2.7 2.4e-22 79.1 1.5 2.1 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain P22_AR_C PF10548.9 ORF76074 - 0.13 12.5 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 P22AR C-terminal domain CRAL_TRIO PF00650.20 ORF75171 - 7.1e-14 51.8 0.0 9.7e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF75171 - 0.00038 20.6 0.2 0.00077 19.6 0.2 1.4 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain Ank PF00023.30 ORF73144 - 9.8e-16 57.4 3.6 4.8e-05 23.6 0.1 5.5 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF73144 - 3.7e-14 51.4 0.7 0.049 14.2 0.0 5.4 5 0 0 5 5 5 4 Ankyrin repeat Ank_2 PF12796.7 ORF73144 - 4.5e-14 52.8 0.0 1.3e-05 25.7 0.0 3.2 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF73144 - 3.1e-11 43.6 0.8 0.043 14.4 0.0 5.5 3 2 3 6 6 6 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF73144 - 0.00087 19.5 1.0 2.4 8.6 0.0 4.1 3 1 0 3 3 3 1 Ankyrin repeats (many copies) Pkinase PF00069.25 ORF69980 - 4.4e-05 23.0 0.4 0.0002 20.8 0.0 2.0 2 0 0 2 2 2 1 Protein kinase domain DUF416 PF04222.12 ORF69980 - 0.14 11.6 0.1 0.14 11.6 0.1 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF416) Phage_connect_1 PF05135.13 ORF69980 - 0.14 12.7 4.9 0.31 11.6 0.0 2.6 1 1 1 2 2 2 0 Phage gp6-like head-tail connector protein EF-hand_5 PF13202.6 ORF68718 - 0.00059 19.2 0.0 0.0013 18.1 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF68718 - 0.00065 19.1 0.1 0.0013 18.1 0.1 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF68718 - 0.0014 18.4 0.0 0.0034 17.2 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF68718 - 0.0045 17.4 0.1 0.01 16.3 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF68718 - 0.0053 16.6 0.1 0.012 15.4 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair DUF3337 PF11816.8 ORF68718 - 0.11 12.3 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3337) DnaJ_CXXCXGXG PF00684.19 ORF658 - 0.19 12.1 0.4 0.19 12.1 0.4 2.8 4 0 0 4 4 4 0 DnaJ central domain Phage_int_SAM_5 PF13102.6 ORF64212 - 0.021 15.2 0.1 0.1 12.9 0.1 2.2 3 0 0 3 3 3 0 Phage integrase SAM-like domain Tape_meas_lam_C PF09718.10 ORF64212 - 0.081 13.1 1.3 6.3 7.0 0.6 2.7 2 1 0 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) NatB_MDM20 PF09797.9 ORF64212 - 0.093 11.6 0.2 0.12 11.2 0.2 1.2 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit DUF4404 PF14357.6 ORF64212 - 0.096 13.3 1.4 0.21 12.3 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) Spore_YhcN_YlaJ PF09580.10 ORF64212 - 0.83 9.7 3.0 0.43 10.6 0.7 1.7 2 0 0 2 2 2 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) Spore_III_AF PF09581.10 ORF64212 - 3.1 7.8 7.9 4.2 7.4 7.0 1.6 1 1 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) ABC_tran PF00005.27 ORF62260 - 8.7e-29 100.8 0.0 1.1e-28 100.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF62260 - 2.6e-08 34.0 0.0 0.003 17.4 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF62260 - 0.00056 19.9 0.0 0.00084 19.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 ORF62260 - 0.0013 18.4 0.1 0.005 16.4 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF62260 - 0.0013 19.1 0.0 0.0018 18.7 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 ORF62260 - 0.003 16.4 2.5 0.49 9.1 0.3 2.5 2 1 1 3 3 3 2 Predicted ATPase of the ABC class AAA_22 PF13401.6 ORF62260 - 0.0035 17.6 0.0 0.0063 16.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF62260 - 0.0057 16.4 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF62260 - 0.022 15.3 0.6 0.03 14.8 0.6 1.1 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF62260 - 0.025 14.8 0.2 2.1 8.6 0.2 2.5 1 1 1 2 2 2 0 AAA domain AAA_24 PF13479.6 ORF62260 - 0.026 14.3 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_3 PF07726.11 ORF62260 - 0.032 14.1 0.0 0.071 13.0 0.0 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 ORF62260 - 0.1 12.6 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF62260 - 0.1 12.5 0.1 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 NACHT domain AAA PF00004.29 ORF62260 - 0.13 12.7 0.0 0.37 11.2 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ALMT PF11744.8 ORF5908 - 7.2 5.3 17.4 15 4.3 17.3 1.6 1 1 0 1 1 1 0 Aluminium activated malate transporter adh_short PF00106.25 ORF56138 - 1.1e-12 47.8 0.0 7.2e-10 38.6 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF56138 - 9.3e-09 35.2 0.0 1.3e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase ubiquitin PF00240.23 ORF56091 - 8.5e-05 22.2 0.1 0.0002 21.0 0.1 1.7 1 0 0 1 1 1 1 Ubiquitin family Ank_2 PF12796.7 ORF54830 - 1.3e-14 54.6 0.9 0.0014 19.2 0.1 3.6 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF54830 - 1.7e-11 44.1 5.1 0.0017 18.6 0.0 4.0 3 1 2 5 5 5 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF54830 - 1.7e-09 37.1 7.1 0.024 15.2 0.1 5.2 6 0 0 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF54830 - 2.4e-09 37.5 3.6 0.068 13.8 0.1 5.0 4 1 0 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF54830 - 3.4e-06 27.3 10.1 0.0028 18.0 0.0 5.0 5 0 0 5 5 5 2 Ankyrin repeat TAFH PF07531.14 ORF52997 - 0.1 12.7 6.0 0.52 10.4 0.3 2.9 2 1 0 2 2 2 0 NHR1 homology to TAF Fez1 PF06818.15 ORF52997 - 0.26 11.7 26.2 1.6 9.1 26.2 2.1 1 1 0 1 1 1 0 Fez1 ATG16 PF08614.11 ORF52997 - 0.28 11.4 24.5 4.3 7.5 16.3 2.3 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Tropomyosin PF00261.20 ORF52997 - 0.53 9.6 27.1 0.58 9.5 26.0 1.4 1 1 0 1 1 1 0 Tropomyosin DUF948 PF06103.11 ORF52997 - 0.95 9.8 4.8 0.29 11.4 0.3 2.3 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) COG2 PF06148.11 ORF52997 - 1.9 8.6 16.2 0.19 11.8 6.1 2.4 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Spc7 PF08317.11 ORF52997 - 7.3 5.4 30.3 17 4.1 28.4 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein MHC_I_C PF06623.11 ORF52604 - 0.039 13.9 0.0 5.5 7.0 0.0 2.7 2 0 0 2 2 2 0 MHC_I C-terminus WD40 PF00400.32 ORF42827 - 1.1e-30 105.2 9.0 1.1e-07 32.3 0.0 7.1 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF42827 - 1.1e-10 41.6 0.1 0.04 14.2 0.0 4.7 1 1 4 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF42827 - 3.1e-05 22.8 1.2 0.023 13.3 0.1 3.7 1 1 1 4 4 4 1 Nucleoporin Nup120/160 DUF5046 PF16465.5 ORF42827 - 0.00019 21.0 0.0 0.00045 19.8 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF5046) WD40_like PF17005.5 ORF42827 - 0.0027 17.1 0.0 0.016 14.6 0.0 2.2 1 1 1 2 2 2 1 WD40-like domain PHTB1_N PF14727.6 ORF42827 - 0.077 12.3 0.0 1.1 8.5 0.0 2.2 2 0 0 2 2 2 0 PTHB1 N-terminus peroxidase PF00141.23 ORF39827 - 4.3e-16 59.3 0.0 3.1e-15 56.5 0.0 1.9 1 1 0 1 1 1 1 Peroxidase Pkinase PF00069.25 ORF35735 - 4.3e-05 23.0 0.4 0.0002 20.8 0.0 2.0 2 0 0 2 2 2 1 Protein kinase domain DUF416 PF04222.12 ORF35735 - 0.14 11.6 0.1 0.14 11.6 0.1 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF416) Phage_connect_1 PF05135.13 ORF35735 - 0.14 12.7 4.9 0.31 11.6 0.0 2.7 1 1 1 2 2 2 0 Phage gp6-like head-tail connector protein Metallophos PF00149.28 ORF35461 - 6.2e-38 131.3 0.1 7.5e-38 131.1 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF35461 - 8.5e-23 80.5 2.7 2.4e-22 79.1 1.5 2.1 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain P22_AR_C PF10548.9 ORF35461 - 0.13 12.5 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 P22AR C-terminal domain Cytochrom_C550 PF14495.6 ORF34799 - 0.042 13.6 0.1 0.087 12.5 0.1 1.5 1 0 0 1 1 1 0 Cytochrome c-550 domain Helicase_C PF00271.31 ORF33349 - 1e-06 29.1 0.0 1.5e-06 28.6 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Semialdhyde_dhC PF02774.18 ORF33349 - 0.031 14.4 0.0 0.05 13.7 0.0 1.4 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, dimerisation domain AMMECR1 PF01871.17 ORF33349 - 0.09 12.4 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 AMMECR1 YoeB_toxin PF06769.14 ORF26758 - 0.083 12.9 0.4 5.8 7.0 0.1 2.4 2 0 0 2 2 2 0 YoeB-like toxin of bacterial type II toxin-antitoxin system CTNNBL PF08216.11 ORF26758 - 4.6 7.5 6.5 1.7 8.8 0.2 2.7 2 2 1 3 3 3 0 Catenin-beta-like, Arm-motif containing nuclear P5CR_dimer PF14748.6 ORF24477 - 1.6e-38 131.1 1.3 3.1e-38 130.1 1.3 1.5 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 ORF24477 - 7.8e-25 87.3 0.5 1.7e-24 86.2 0.5 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 ORF24477 - 1.9e-09 37.9 0.1 4.3e-09 36.7 0.1 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF24477 - 0.00021 21.5 0.1 0.00037 20.8 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 ORF24477 - 0.0027 17.8 0.0 0.0054 16.8 0.0 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GFO_IDH_MocA PF01408.22 ORF24477 - 0.0038 18.0 0.0 0.0083 16.9 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold OCD_Mu_crystall PF02423.15 ORF24477 - 0.012 14.5 0.0 0.022 13.7 0.0 1.4 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family PDH PF02153.17 ORF24477 - 0.021 13.9 0.1 0.042 12.9 0.1 1.6 1 0 0 1 1 1 0 Prephenate dehydrogenase 2-Hacid_dh_C PF02826.19 ORF24477 - 0.033 13.6 0.1 0.069 12.5 0.1 1.7 1 1 1 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_4 PF01565.23 ORF24477 - 0.034 13.9 4.3 0.45 10.2 0.0 3.2 4 1 0 4 4 4 0 FAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF24477 - 0.064 13.2 3.4 1.3 9.0 3.5 2.3 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 ORF24477 - 0.097 12.3 3.9 0.83 9.3 3.9 2.1 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 ORF24477 - 1.5 8.6 6.6 0.7 9.7 0.1 2.5 2 1 1 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Metallophos PF00149.28 ORF19315 - 6.2e-38 131.3 0.1 7.5e-38 131.1 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF19315 - 8.5e-23 80.5 2.7 2.4e-22 79.1 1.5 2.1 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain P22_AR_C PF10548.9 ORF19315 - 0.13 12.5 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 P22AR C-terminal domain Esterase PF00756.20 ORF18833 - 3.9e-05 23.4 0.1 6.8e-05 22.6 0.1 1.4 1 1 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF18833 - 0.00056 19.4 0.7 0.00078 19.0 0.7 1.4 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF18833 - 0.0016 18.2 0.0 0.0022 17.7 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF18833 - 0.0098 16.5 0.1 0.012 16.2 0.1 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF18833 - 0.03 13.6 0.0 0.041 13.1 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Asp2 PF16929.5 ORF18833 - 0.13 11.2 0.1 0.18 10.7 0.1 1.2 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter DLH PF01738.18 ORF18833 - 0.23 11.0 0.3 0.37 10.3 0.3 1.5 1 1 0 1 1 1 0 Dienelactone hydrolase family RINGv PF12906.7 ORF17870 - 1.7e-12 47.3 4.0 1.7e-12 47.3 4.0 1.9 2 0 0 2 2 2 1 RING-variant domain zf-RING_2 PF13639.6 ORF17870 - 0.012 15.9 3.6 0.033 14.5 3.6 1.8 1 0 0 1 1 1 0 Ring finger domain TerD PF02342.18 ORF17471 - 2.4e-38 131.5 0.0 3.3e-38 131.1 0.0 1.1 1 0 0 1 1 1 1 TerD domain DUF4777 PF16007.5 ORF17471 - 0.1 12.9 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) cobW PF02492.19 ORF13996 - 0.025 14.2 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain 2OG-FeII_Oxy_3 PF13640.6 ORF13389 - 1.2e-17 64.5 0.0 2e-17 63.9 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF13389 - 1.3e-10 41.8 0.0 2.3e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Ank_2 PF12796.7 ORF12463 - 6.9e-46 154.7 0.5 1.4e-12 48.0 0.0 4.5 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank PF00023.30 ORF12463 - 3.8e-33 112.5 2.7 8e-06 26.1 0.1 7.2 7 0 0 7 7 7 6 Ankyrin repeat Ank_5 PF13857.6 ORF12463 - 1.5e-28 98.5 4.7 2.2e-07 31.0 0.0 5.7 2 2 4 6 6 6 6 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF12463 - 3.5e-28 97.6 0.4 3.5e-08 33.8 0.0 4.8 3 2 2 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF12463 - 3.3e-24 82.3 0.0 0.003 17.9 0.0 7.9 8 0 0 8 8 8 5 Ankyrin repeat TPR_4 PF07721.14 ORF12463 - 9.4 7.2 9.2 5.4 7.9 1.3 3.5 2 0 0 2 2 2 0 Tetratricopeptide repeat Pkinase PF00069.25 ORF1192 - 4.3e-05 23.0 0.4 0.0002 20.8 0.0 2.0 2 0 0 2 2 2 1 Protein kinase domain DUF416 PF04222.12 ORF1192 - 0.14 11.6 0.1 0.14 11.6 0.1 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF416) Phage_connect_1 PF05135.13 ORF1192 - 0.14 12.7 4.9 0.31 11.6 0.0 2.7 1 1 1 2 2 2 0 Phage gp6-like head-tail connector protein Pkinase PF00069.25 ORF11787 - 6.9e-48 163.3 0.0 8.3e-48 163.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF11787 - 3.4e-25 88.8 0.0 3.9e-25 88.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF11787 - 0.0035 17.3 3.9 0.18 11.7 0.6 2.6 2 1 1 3 3 3 2 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF11787 - 0.082 11.7 0.0 0.12 11.1 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Globin PF00042.22 ORF11297 - 3.8e-10 40.3 0.0 4.6e-09 36.8 0.0 2.2 1 1 0 1 1 1 1 Globin SAM_1 PF00536.30 ORF11297 - 0.14 12.6 1.8 0.22 12.0 0.9 1.8 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) UPF0254 PF06787.11 ORF111693 - 0.053 13.3 0.2 0.19 11.5 0.2 2.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) S1-P1_nuclease PF02265.16 ORF109420 - 3.8e-47 161.2 0.3 5e-47 160.9 0.3 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Pox_C4_C10 PF03336.13 ORF109420 - 0.043 12.9 1.8 0.45 9.6 0.1 2.3 2 1 0 2 2 2 0 Poxvirus C4/C10 protein Pkinase PF00069.25 ORF108119 - 4.3e-05 23.0 0.4 0.0002 20.8 0.0 2.0 2 0 0 2 2 2 1 Protein kinase domain DUF416 PF04222.12 ORF108119 - 0.14 11.6 0.1 0.14 11.6 0.1 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF416) Phage_connect_1 PF05135.13 ORF108119 - 0.14 12.7 4.9 0.31 11.6 0.0 2.7 1 1 1 2 2 2 0 Phage gp6-like head-tail connector protein LRR_6 PF13516.6 ORF106558 - 1.4e-12 46.5 14.6 0.034 14.2 0.2 7.4 7 1 0 7 7 7 6 Leucine Rich repeat AA_kinase PF00696.28 ORF106537 - 9.8e-39 133.4 2.4 1.1e-38 133.2 2.4 1.0 1 0 0 1 1 1 1 Amino acid kinase family ubiquitin PF00240.23 ORF105177 - 1.9e-16 59.6 0.0 3.8e-16 58.6 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF105177 - 4.8e-07 29.5 0.0 9.9e-07 28.5 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like 5_nucleotid PF05761.14 ORF105177 - 0.023 13.6 0.0 0.045 12.7 0.0 1.4 1 1 1 2 2 2 0 5' nucleotidase family GNT-I PF03071.15 ORF10322 - 3.8e-07 29.2 0.1 9.7e-07 27.9 0.1 1.7 1 1 0 1 1 1 1 GNT-I family Chitin_bind_1 PF00187.19 ORF10322 - 0.0045 17.4 15.9 0.0081 16.6 15.9 1.4 1 0 0 1 1 1 1 Chitin recognition protein Nuc_sug_transp PF04142.15 ORF102662 - 2.3e-17 63.2 9.2 2.8e-17 62.9 9.2 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF102662 - 0.38 10.9 18.0 0.16 12.1 4.6 2.1 2 0 0 2 2 2 0 EamA-like transporter family Abhydrolase_1 PF00561.20 ORF100166 - 1.3e-19 70.8 0.0 2.2e-19 70.1 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF100166 - 1.6e-13 50.5 0.0 2e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF100166 - 2.1e-11 44.8 0.0 2.7e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 ORF100166 - 0.00019 20.2 0.0 0.00029 19.6 0.0 1.3 1 0 0 1 1 1 1 Ndr family Esterase PF00756.20 ORF100166 - 0.00034 20.4 0.0 0.00051 19.8 0.0 1.3 1 0 0 1 1 1 1 Putative esterase LIDHydrolase PF10230.9 ORF100166 - 0.0016 18.1 0.0 0.0023 17.5 0.0 1.2 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase PGAP1 PF07819.13 ORF100166 - 0.0047 16.7 0.0 0.0082 15.9 0.0 1.3 1 0 0 1 1 1 1 PGAP1-like protein DUF915 PF06028.11 ORF100166 - 0.0082 15.5 0.1 0.02 14.2 0.0 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) Chlorophyllase2 PF12740.7 ORF100166 - 0.0094 14.9 0.0 0.016 14.1 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_5 PF12695.7 ORF100166 - 0.0098 15.7 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIFR_D2 PF17971.1 ORF100166 - 0.062 13.5 0.2 0.12 12.5 0.2 1.5 1 0 0 1 1 1 0 Leukemia inhibitory factor receptor D2 domain Peptidase_S9 PF00326.21 ORF100166 - 0.12 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family RCC1_2 PF13540.6 NODE_26588_length_802_cov_98.367666_g20802_i0reverse_frame_1 - 1.6e-13 50.1 24.6 0.035 13.9 0.1 7.3 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_26588_length_802_cov_98.367666_g20802_i0reverse_frame_1 - 0.00056 20.0 6.9 8.4 6.5 0.3 5.9 4 2 1 5 5 5 1 Uncharacterised ACR, YagE family COG1723 Phage_P2_GpU PF06995.11 NODE_26588_length_802_cov_98.367666_g20802_i0reverse_frame_1 - 0.0061 16.2 0.1 80 2.9 0.0 4.7 4 2 2 6 6 6 0 Phage P2 GpU Glyco_hydro_88 PF07470.13 NODE_26588_length_802_cov_98.367666_g20802_i0reverse_frame_1 - 0.31 10.1 1.4 46 2.9 0.0 3.9 5 1 1 6 6 6 0 Glycosyl Hydrolase Family 88 UPF0061 PF02696.14 NODE_26588_length_802_cov_98.367666_g20802_i0reverse_frame_1 - 2 7.1 4.8 5.7 5.6 0.0 3.8 6 1 1 7 7 7 0 Uncharacterized ACR, YdiU/UPF0061 family MCM_OB PF17207.3 NODE_26549_length_803_cov_1.697917_g20773_i0forward_frame_1 - 2.7e-27 95.1 0.1 4.8e-27 94.3 0.1 1.4 1 0 0 1 1 1 1 MCM OB domain Viral_helicase1 PF01443.18 NODE_26534_length_803_cov_124.678385_g20759_i0forward_frame_1 - 0.023 14.5 0.1 0.044 13.5 0.1 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Se-cys_synth_N PF12390.8 NODE_26505_length_804_cov_2.794538_g20738_i1reverse_frame_1 - 0.18 12.0 1.6 6.9 7.0 0.2 3.6 4 0 0 4 4 4 0 Selenocysteine synthase N terminal DUF3458_C PF17432.2 NODE_26504_length_804_cov_2.842653_g20738_i0forward_frame_1 - 0.016 14.6 0.0 0.026 13.9 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3458_C) ARM repeats Se-cys_synth_N PF12390.8 NODE_26504_length_804_cov_2.842653_g20738_i0forward_frame_1 - 0.18 12.1 1.6 6.9 7.0 0.2 3.6 4 0 0 4 4 4 0 Selenocysteine synthase N terminal Tim17 PF02466.19 NODE_26468_length_804_cov_639.661899_g20705_i0forward_frame_1 - 4.1e-05 23.9 0.0 6.3e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family IFNGR1 PF07140.11 NODE_26451_length_805_cov_65.410390_g20691_i0reverse_frame_2 - 0.16 12.1 0.4 0.29 11.2 0.4 1.4 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) DUF4457 PF14652.6 NODE_26451_length_805_cov_65.410390_g20691_i0forward_frame_2 - 1e-33 117.0 0.5 2.6e-23 82.8 0.1 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4457) DUF2618 PF10940.8 NODE_26434_length_805_cov_183.401299_g20676_i0reverse_frame_3 - 6.6 6.6 9.5 0.37 10.6 3.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) zf-Nse PF11789.8 NODE_26433_length_805_cov_189.570130_g20675_i0forward_frame_2 - 0.091 12.6 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit DUF2207 PF09972.9 NODE_26410_length_806_cov_85.365759_g20657_i0reverse_frame_2 - 2.1 7.0 3.5 3 6.5 3.5 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4501 PF14946.6 NODE_26410_length_806_cov_85.365759_g20657_i0reverse_frame_2 - 5.1 7.1 5.4 5.7 7.0 3.0 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4501) UPF0239 PF06783.11 NODE_26410_length_806_cov_85.365759_g20657_i0forward_frame_2 - 0.1 12.8 6.0 0.21 11.8 6.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Ras PF00071.22 NODE_26358_length_807_cov_96.639896_g20613_i0reverse_frame_2 - 3.1e-55 186.2 0.9 4.1e-55 185.8 0.9 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_26358_length_807_cov_96.639896_g20613_i0reverse_frame_2 - 1.3e-32 112.6 0.1 2.3e-32 111.7 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_26358_length_807_cov_96.639896_g20613_i0reverse_frame_2 - 5.4e-18 65.1 0.3 7.5e-18 64.6 0.3 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 NODE_26358_length_807_cov_96.639896_g20613_i0reverse_frame_2 - 1.6e-06 28.1 0.0 2.9e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 NODE_26358_length_807_cov_96.639896_g20613_i0reverse_frame_2 - 1.9e-05 24.6 0.1 0.022 14.6 0.1 2.2 2 0 0 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 NODE_26358_length_807_cov_96.639896_g20613_i0reverse_frame_2 - 0.00012 21.5 0.2 0.00016 21.1 0.2 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 NODE_26358_length_807_cov_96.639896_g20613_i0reverse_frame_2 - 0.00012 21.7 0.1 0.00028 20.5 0.1 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 NODE_26358_length_807_cov_96.639896_g20613_i0reverse_frame_2 - 0.0035 16.9 0.1 0.025 14.1 0.1 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B Cullin PF00888.22 ORF97215 - 4.9e-37 127.9 5.1 4.9e-37 127.9 5.1 1.5 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF97215 - 1.6e-17 63.3 0.7 4.3e-17 61.9 0.7 1.8 1 0 0 1 1 1 1 Cullin protein neddylation domain DUF3658 PF12395.8 ORF97215 - 0.0027 17.6 0.0 0.024 14.5 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function Arrestin_C PF02752.22 ORF97215 - 0.076 13.5 3.8 0.21 12.0 0.8 2.6 2 1 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain CDH1_2_SANT_HL1 PF18375.1 ORF9681 - 0.032 14.9 0.7 0.032 14.9 0.7 1.8 2 0 0 2 2 2 0 CDH1/2 SANT-Helical linker 1 Ald_Xan_dh_C2 PF02738.18 ORF95590 - 1.5e-44 152.4 3.3 1.7e-44 152.2 3.3 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Sugar_tr PF00083.24 ORF95347 - 1.9e-17 63.3 0.0 1.5e-08 34.0 0.0 2.0 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF95347 - 5.5e-06 25.5 0.0 7e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_Mycoplasma PF07672.13 ORF95347 - 0.015 14.6 0.9 0.027 13.7 0.6 1.5 2 0 0 2 2 2 0 Mycoplasma MFS transporter DUF3328 PF11807.8 ORF95347 - 0.17 11.7 0.1 0.3 10.8 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3328) DUF4149 PF13664.6 ORF95347 - 0.2 12.0 2.2 0.31 11.4 0.2 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4149) IPK PF03770.16 ORF95264 - 2.5e-16 60.1 0.0 4e-15 56.2 0.0 2.5 1 1 0 1 1 1 1 Inositol polyphosphate kinase Methyltransf_31 PF13847.6 ORF94764 - 0.1 12.4 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_2 PF00891.18 ORF94764 - 0.15 11.3 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain TTL PF03133.15 ORF94761 - 7.5e-11 41.7 0.0 1.1e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF94761 - 5.9e-07 29.0 0.0 1.2e-06 27.9 0.0 1.6 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF94761 - 0.00046 19.5 0.0 0.00072 18.9 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp FAM176 PF14851.6 ORF94761 - 0.0095 15.6 0.4 0.015 15.0 0.4 1.4 1 0 0 1 1 1 1 FAM176 family RimK PF08443.11 ORF94761 - 0.085 12.4 0.1 0.37 10.4 0.0 1.9 2 0 0 2 2 2 0 RimK-like ATP-grasp domain Pox_Ag35 PF03286.14 ORF94761 - 0.15 11.8 5.4 0.27 11.0 5.4 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF2203 PF09969.9 ORF94761 - 0.28 11.9 2.1 16 6.2 0.2 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) PBP1_TM PF14812.6 ORF94761 - 0.84 10.0 6.2 2 8.8 6.2 1.6 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Glyco_hydro_38C PF07748.13 ORF94744 - 1.9e-12 47.8 0.0 4e-12 46.7 0.0 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Glyco_hydro38C2 PF17677.1 ORF94744 - 1.2e-05 25.4 0.0 2.1e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain DUF2475 PF10629.9 ORF91060 - 1.9e-05 24.8 6.2 0.076 13.2 0.0 3.8 4 0 0 4 4 4 3 Protein of unknown function (DUF2475) Ank_2 PF12796.7 ORF89367 - 5.4e-07 30.1 0.0 9.5e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF89367 - 0.0034 17.9 0.0 0.05 14.2 0.0 2.6 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF89367 - 0.0051 17.1 0.0 0.22 11.9 0.0 2.6 1 1 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF89367 - 0.015 15.7 0.0 1.4 9.5 0.0 2.5 1 1 1 2 2 2 0 Ankyrin repeat SRP40_C PF05022.12 ORF89033 - 6e-16 59.1 6.9 6e-16 59.1 6.9 3.0 2 1 0 2 2 2 1 SRP40, C-terminal domain Presenilin PF01080.17 ORF89033 - 1.2 7.8 13.4 1.4 7.6 13.4 1.3 1 0 0 1 1 1 0 Presenilin Hid1 PF12722.7 ORF89033 - 1.9 6.5 10.5 2.2 6.3 10.5 1.3 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein CDC45 PF02724.14 ORF89033 - 1.9 6.7 22.2 2.5 6.3 22.2 1.2 1 0 0 1 1 1 0 CDC45-like protein BtpA PF03437.15 ORF88005 - 2.9e-109 364.4 0.1 3.3e-109 364.2 0.1 1.0 1 0 0 1 1 1 1 BtpA family MbeD_MobD PF04899.12 ORF86170 - 0.0065 16.6 0.8 1.2 9.3 0.0 2.5 2 0 0 2 2 2 2 MbeD/MobD like Baculo_PEP_C PF04513.12 ORF86170 - 0.18 11.8 4.7 0.32 11.1 0.6 2.3 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 ORF86170 - 0.24 11.4 16.0 0.054 13.5 2.5 2.9 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) Phasin PF05597.11 ORF86170 - 0.54 10.3 13.7 0.36 10.8 2.9 3.1 2 1 0 3 3 3 0 Poly(hydroxyalcanoate) granule associated protein (phasin) FAM184 PF15665.5 ORF86170 - 2.3 7.9 23.9 3.2 7.5 9.7 2.3 1 1 0 2 2 2 0 Family with sequence similarity 184, A and B MtrG PF04210.13 ORF86170 - 2.9 7.8 5.3 26 4.7 0.2 3.3 2 1 1 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G Snapin_Pallidin PF14712.6 ORF86170 - 5.2 7.6 16.6 0.55 10.7 3.3 3.6 2 2 2 4 4 4 0 Snapin/Pallidin GAS PF13851.6 ORF83408 - 0.77 9.1 11.7 1.2 8.4 11.7 1.3 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding TolA_bind_tri PF16331.5 ORF83408 - 1.6 8.9 11.4 3.3 7.9 0.7 3.4 2 1 1 3 3 3 0 TolA binding protein trimerisation Exonuc_VII_L PF02601.15 ORF83408 - 1.8 8.1 8.7 0.61 9.6 6.0 1.5 2 0 0 2 2 2 0 Exonuclease VII, large subunit DUF641 PF04859.12 ORF82506 - 3.2e-06 27.5 19.9 0.023 15.1 1.0 4.0 1 1 3 4 4 4 2 Plant protein of unknown function (DUF641) PKcGMP_CC PF16808.5 ORF82506 - 4.4e-05 23.2 18.6 2.4 8.1 1.6 7.2 4 1 3 8 8 7 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Spc7 PF08317.11 ORF82506 - 0.00041 19.3 30.6 0.017 14.0 16.7 2.4 1 1 1 2 2 2 2 Spc7 kinetochore protein Filament PF00038.21 ORF82506 - 0.0014 18.3 29.8 0.048 13.2 18.9 2.9 1 1 2 3 3 3 2 Intermediate filament protein FAM76 PF16046.5 ORF82506 - 0.0018 17.7 28.9 0.03 13.7 2.2 2.9 1 1 2 3 3 3 2 FAM76 protein GAS PF13851.6 ORF82506 - 0.0018 17.6 26.5 0.0044 16.4 25.9 2.2 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding UPF0242 PF06785.11 ORF82506 - 0.0021 18.2 42.5 0.48 10.5 14.7 3.6 1 1 2 3 3 3 2 Uncharacterised protein family (UPF0242) N-terminus Mt_ATP-synt_D PF05873.12 ORF82506 - 0.0026 17.6 8.1 0.0026 17.6 8.1 3.0 2 1 1 3 3 3 1 ATP synthase D chain, mitochondrial (ATP5H) AAA_13 PF13166.6 ORF82506 - 0.0028 16.4 27.9 0.013 14.2 10.0 2.0 1 1 1 2 2 2 2 AAA domain DHR10 PF18595.1 ORF82506 - 0.0038 17.3 15.2 0.0038 17.3 15.2 3.1 2 1 1 3 3 3 1 Designed helical repeat protein 10 domain KASH_CCD PF14662.6 ORF82506 - 0.0041 17.0 29.5 0.026 14.3 6.9 3.9 1 1 2 4 4 4 2 Coiled-coil region of CCDC155 or KASH Atg14 PF10186.9 ORF82506 - 0.0044 16.1 10.8 0.0044 16.1 10.8 2.8 1 1 2 3 3 3 2 Vacuolar sorting 38 and autophagy-related subunit 14 IL10 PF00726.17 ORF82506 - 0.0051 16.3 4.4 0.067 12.7 1.5 2.3 1 1 1 2 2 2 1 Interleukin 10 HOOK PF05622.12 ORF82506 - 0.007 14.6 28.7 0.0074 14.5 27.5 1.6 1 1 0 1 1 1 1 HOOK protein Phage_TTP_12 PF16461.5 ORF82506 - 0.022 14.4 3.9 0.13 11.9 0.2 3.1 2 1 2 4 4 3 0 Lambda phage tail tube protein, TTP HrpB7 PF09486.10 ORF82506 - 0.023 15.1 19.3 0.17 12.2 10.3 3.6 1 1 1 3 3 3 0 Bacterial type III secretion protein (HrpB7) Cas6 PF09559.10 ORF82506 - 0.027 14.5 2.3 0.053 13.5 2.3 1.5 1 0 0 1 1 1 0 Cas6 Crispr Prefoldin_2 PF01920.20 ORF82506 - 0.043 13.8 2.1 0.043 13.8 2.1 5.0 2 1 3 5 5 5 0 Prefoldin subunit Fib_alpha PF08702.10 ORF82506 - 0.046 13.9 33.1 0.092 12.9 17.4 3.4 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family DUF3552 PF12072.8 ORF82506 - 0.059 12.8 30.0 0.86 9.0 7.7 3.2 1 1 2 3 3 3 0 Domain of unknown function (DUF3552) DUF211 PF02680.14 ORF82506 - 0.11 12.7 7.2 1.5 9.1 0.2 2.8 1 1 2 3 3 3 0 Uncharacterized ArCR, COG1888 BST2 PF16716.5 ORF82506 - 0.12 13.0 19.9 0.38 11.4 7.5 3.2 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 MPS2 PF17060.5 ORF82506 - 0.13 11.5 28.5 0.53 9.5 12.1 3.0 1 1 2 3 3 3 0 Monopolar spindle protein 2 PI3K_P85_iSH2 PF16454.5 ORF82506 - 0.16 11.6 32.9 0.54 9.8 1.2 2.5 1 1 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fez1 PF06818.15 ORF82506 - 0.19 12.1 24.3 0.46 10.9 12.5 3.3 1 1 2 3 3 3 0 Fez1 DivIC PF04977.15 ORF82506 - 0.28 11.0 29.6 0.57 10.0 4.1 5.3 2 1 2 5 5 5 0 Septum formation initiator ATG16 PF08614.11 ORF82506 - 0.42 10.8 26.0 2 8.6 7.4 3.2 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Spc29 PF17082.5 ORF82506 - 0.46 10.3 21.9 0.45 10.3 7.8 3.2 1 1 2 3 3 3 0 Spindle Pole Component 29 SlyX PF04102.12 ORF82506 - 0.47 11.1 22.6 3.3 8.4 11.2 4.2 1 1 3 4 4 4 0 SlyX FPP PF05911.11 ORF82506 - 0.51 8.5 26.6 0.28 9.3 23.7 1.7 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil FliJ PF02050.16 ORF82506 - 0.52 10.5 30.7 3.2 8.0 4.0 3.4 1 1 2 3 3 3 0 Flagellar FliJ protein Phage_GPO PF05929.11 ORF82506 - 0.66 9.5 17.5 0.86 9.2 13.3 2.3 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase ArgoMid PF16487.5 ORF82506 - 0.85 9.9 3.4 1.1 9.6 1.1 2.6 2 1 1 3 3 1 0 Mid domain of argonaute Exonuc_VII_L PF02601.15 ORF82506 - 0.94 9.0 23.1 1.3 8.5 17.3 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit DUF2203 PF09969.9 ORF82506 - 1 10.1 20.7 2.6 8.8 4.4 3.2 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) APG6_N PF17675.1 ORF82506 - 1.1 9.8 34.2 3.6 8.1 23.8 3.0 2 1 1 3 3 3 0 Apg6 coiled-coil region DUF4200 PF13863.6 ORF82506 - 1.1 9.6 35.3 1.6 9.2 6.2 3.8 1 1 1 3 3 3 0 Domain of unknown function (DUF4200) Lebercilin PF15619.6 ORF82506 - 1.2 8.8 28.3 6.4 6.4 9.3 3.0 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF3450 PF11932.8 ORF82506 - 1.3 8.3 34.0 0.18 11.1 13.4 3.4 1 1 2 4 4 4 0 Protein of unknown function (DUF3450) HemX PF04375.14 ORF82506 - 1.3 8.2 29.0 6.7 5.9 5.4 3.1 1 1 2 3 3 3 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF4407 PF14362.6 ORF82506 - 1.5 8.1 28.2 0.44 9.8 16.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF4795 PF16043.5 ORF82506 - 1.9 8.0 25.3 32 4.1 25.2 3.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) DUF745 PF05335.13 ORF82506 - 2.1 8.0 16.5 1 9.1 13.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF745) ADIP PF11559.8 ORF82506 - 2.5 8.2 34.6 1.1 9.3 12.0 3.6 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding XLF PF09302.11 ORF82506 - 3.6 7.7 19.9 26 4.9 1.0 4.4 1 1 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component TMPIT PF07851.13 ORF82506 - 4.1 6.6 25.0 0.21 10.8 6.2 2.9 1 1 2 3 3 3 0 TMPIT-like protein Taxilin PF09728.9 ORF82506 - 4.4 6.4 30.1 13 4.9 17.3 2.9 1 1 1 2 2 2 0 Myosin-like coiled-coil protein USP8_interact PF08941.10 ORF82506 - 4.9 6.9 16.1 5.5 6.8 6.4 3.1 1 1 2 3 3 3 0 USP8 interacting Glutaredoxin2_C PF04399.13 ORF82506 - 5.2 6.9 9.8 4.1 7.3 3.2 3.2 2 1 2 4 4 4 0 Glutaredoxin 2, C terminal domain CENP-F_leu_zip PF10473.9 ORF82506 - 5.6 7.0 30.5 0.26 11.3 14.6 3.2 1 1 3 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlaC_arch PF05377.11 ORF82506 - 5.6 7.4 15.7 22 5.5 0.6 4.5 2 1 3 5 5 5 0 Flagella accessory protein C (FlaC) TMF_DNA_bd PF12329.8 ORF82506 - 8 6.5 34.0 2.4 8.2 9.2 5.0 1 1 5 6 6 6 0 TATA element modulatory factor 1 DNA binding Laminin_II PF06009.12 ORF82506 - 8.8 6.3 19.0 0.96 9.5 10.3 2.7 1 1 1 3 3 2 0 Laminin Domain II fn3 PF00041.21 ORF80932 - 3.4e-30 104.2 0.0 3.7e-11 43.2 0.1 3.2 3 0 0 3 3 3 3 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 ORF80932 - 1.2e-09 38.6 0.0 0.00051 20.6 0.0 3.4 3 1 0 3 3 3 2 Purple acid Phosphatase, N-terminal domain DUF2369 PF10179.9 ORF80932 - 0.028 14.8 0.0 3.8 8.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2369) Y_Y_Y PF07495.13 ORF80932 - 0.082 12.9 0.0 7 6.7 0.0 2.9 3 0 0 3 3 3 0 Y_Y_Y domain A2M PF00207.22 ORF78599 - 0.027 14.3 0.0 0.056 13.3 0.0 1.5 1 0 0 1 1 1 0 Alpha-2-macroglobulin family HAD PF12710.7 ORF78599 - 0.034 14.5 1.1 1.5 9.1 0.0 2.2 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 ORF78599 - 0.069 12.9 0.2 0.11 12.2 0.0 1.5 2 0 0 2 2 2 0 Polynucleotide kinase 3 phosphatase NicO PF03824.16 ORF78246 - 7.3e-39 133.8 15.7 8.7e-39 133.6 15.7 1.1 1 0 0 1 1 1 1 High-affinity nickel-transport protein DUF2754 PF10953.8 ORF78246 - 1.4 9.2 5.9 4.4 7.6 0.2 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2754) T2SSE PF00437.20 ORF75575 - 1.6e-61 207.7 4.2 3.2e-61 206.8 1.4 2.0 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_23 PF13476.6 ORF75575 - 1.4e-06 28.9 0.0 1.4e-06 28.9 0.0 1.3 1 1 0 1 1 1 1 AAA domain Glyco_trans_4_4 PF13579.6 ORF75575 - 5.4e-06 26.9 0.3 9.8e-06 26.1 0.0 1.6 2 0 0 2 2 1 1 Glycosyl transferase 4-like domain AAA_29 PF13555.6 ORF75575 - 3.1e-05 23.6 0.1 8.5e-05 22.2 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF75575 - 4.5e-05 23.9 0.1 0.00012 22.5 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF75575 - 0.00038 20.2 0.3 0.0035 17.1 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 ORF75575 - 0.00046 20.5 0.0 0.0014 18.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 ORF75575 - 0.0015 18.5 2.1 0.091 12.7 0.2 2.7 2 1 1 3 3 3 1 NTPase AAA_18 PF13238.6 ORF75575 - 0.0015 19.0 0.0 0.0031 18.0 0.0 1.7 2 0 0 2 2 1 1 AAA domain AAA_5 PF07728.14 ORF75575 - 0.0022 18.0 0.0 0.0041 17.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 ORF75575 - 0.0036 17.8 0.1 0.007 16.9 0.0 1.6 2 0 0 2 2 1 1 ABC transporter Glyco_transf_4 PF13439.6 ORF75575 - 0.0052 16.8 0.0 0.018 15.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 AAA_19 PF13245.6 ORF75575 - 0.0067 16.8 1.0 0.035 14.4 0.1 2.5 3 1 0 3 3 3 1 AAA domain FtsK_SpoIIIE PF01580.18 ORF75575 - 0.0069 15.8 0.0 0.013 14.9 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_11 PF13086.6 ORF75575 - 0.0089 15.8 0.6 0.03 14.1 0.1 2.1 2 1 0 2 2 2 1 AAA domain Rad17 PF03215.15 ORF75575 - 0.011 15.7 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF75575 - 0.011 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_14 PF13173.6 ORF75575 - 0.012 15.6 0.0 0.025 14.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF75575 - 0.016 15.3 0.1 0.051 13.7 0.0 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain AAA PF00004.29 ORF75575 - 0.027 14.9 0.1 0.058 13.8 0.0 1.6 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) Herpes_Helicase PF02689.14 ORF75575 - 0.035 12.0 0.0 0.047 11.6 0.0 1.1 1 0 0 1 1 1 0 Helicase ATPase_2 PF01637.18 ORF75575 - 0.048 13.6 0.0 0.088 12.7 0.0 1.5 2 0 0 2 2 1 0 ATPase domain predominantly from Archaea AAA_7 PF12775.7 ORF75575 - 0.05 13.1 0.0 0.15 11.6 0.0 1.8 1 0 0 1 1 1 0 P-loop containing dynein motor region SMC_N PF02463.19 ORF75575 - 0.057 12.9 0.0 0.085 12.3 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Zeta_toxin PF06414.12 ORF75575 - 0.06 12.6 0.0 0.13 11.5 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin ATP_bind_1 PF03029.17 ORF75575 - 0.083 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 ORF75575 - 0.085 13.3 0.0 0.29 11.5 0.0 1.9 2 0 0 2 2 2 0 RNA helicase CbiA PF01656.23 ORF75575 - 0.12 12.4 0.1 0.13 12.3 0.1 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain MFS_1 PF07690.16 ORF7467 - 2.1e-24 86.1 50.1 4.5e-21 75.2 26.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF7467 - 2.3e-06 26.7 5.9 2.3e-06 26.7 5.9 2.1 1 1 1 2 2 2 1 MFS_1 like family GXGXG PF01493.19 ORF7467 - 0.34 10.5 1.8 0.5 9.9 1.8 1.2 1 0 0 1 1 1 0 GXGXG motif DUF1275 PF06912.11 ORF7261 - 3.2e-22 79.4 11.4 3.2e-22 79.4 11.4 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1275) TetR_C_19 PF17924.1 ORF70543 - 1.1 9.9 9.5 0.28 11.8 1.6 2.7 1 1 2 3 3 3 0 Tetracyclin repressor-like, C-terminal domain cNMP_binding PF00027.29 ORF69609 - 7.1e-19 67.7 0.0 5.6e-05 23.1 0.0 3.4 4 0 0 4 4 4 3 Cyclic nucleotide-binding domain Dynein_heavy PF03028.15 ORF69609 - 0.11 12.6 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 Dynein heavy chain region D6 P-loop domain Asp PF00026.23 ORF68695 - 1.2e-30 107.0 0.0 1.5e-30 106.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF68695 - 0.00013 21.7 0.0 0.0003 20.6 0.0 1.6 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF68695 - 0.0052 17.4 0.0 0.029 15.0 0.0 2.1 2 0 0 2 2 2 1 Aspartyl protease gag-asp_proteas PF13975.6 ORF68695 - 0.19 12.3 0.0 0.53 10.9 0.0 1.8 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Phage_B PF02304.15 ORF68695 - 0.6 10.5 3.2 0.21 12.0 0.7 1.5 2 0 0 2 2 2 0 Scaffold protein B Metallophos PF00149.28 ORF66675 - 3.9e-07 30.8 2.6 4.8e-07 30.5 1.6 1.6 2 1 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF66675 - 0.017 16.0 0.1 0.043 14.7 0.1 1.7 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C URO-D PF01208.17 ORF66675 - 0.074 12.2 0.0 0.1 11.8 0.0 1.1 1 0 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) bZIP_1 PF00170.21 ORF66621 - 3.1e-08 33.6 4.0 3.1e-08 33.6 4.0 2.5 4 0 0 4 4 4 1 bZIP transcription factor bZIP_2 PF07716.15 ORF66621 - 0.003 17.6 5.2 0.003 17.6 5.2 2.1 2 0 0 2 2 2 1 Basic region leucine zipper Use1 PF09753.9 ORF66621 - 0.096 12.4 5.6 0.039 13.7 2.6 1.9 1 1 0 1 1 1 0 Membrane fusion protein Use1 Fib_alpha PF08702.10 ORF66621 - 0.24 11.6 7.7 2.4 8.3 4.9 2.5 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF66621 - 0.32 11.3 5.8 11 6.4 0.0 3.1 2 1 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4407 PF14362.6 ORF66621 - 2.7 7.3 5.4 3 7.1 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) NHL PF01436.21 ORF62638 - 0.0004 20.3 3.9 1.1 9.5 0.0 4.3 5 0 0 5 5 5 2 NHL repeat Arylesterase PF01731.20 ORF62638 - 0.015 15.5 0.0 9.2 6.5 0.0 2.7 2 0 0 2 2 2 0 Arylesterase SGL PF08450.12 ORF62638 - 0.023 14.3 0.0 18 4.8 0.0 2.9 2 1 1 3 3 3 0 SMP-30/Gluconolactonase/LRE-like region Ldl_recept_b PF00058.17 ORF62638 - 0.028 14.9 0.5 38 4.9 0.0 3.9 4 0 0 4 4 4 0 Low-density lipoprotein receptor repeat class B SBBP PF06739.11 ORF62638 - 0.032 14.2 0.0 5.2 7.2 0.0 3.0 2 0 0 2 2 2 0 Beta-propeller repeat PQQ_3 PF13570.6 ORF62638 - 0.26 11.8 3.4 13 6.5 0.1 4.1 3 1 1 4 4 4 0 PQQ-like domain AlkA_N PF06029.11 ORF60437 - 1.3e-21 77.0 0.0 2.3e-21 76.2 0.0 1.4 1 0 0 1 1 1 1 AlkA N-terminal domain HhH-GPD PF00730.25 ORF60437 - 4.4e-10 40.0 0.0 6.9e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH_5 PF14520.6 ORF60437 - 0.13 12.9 0.0 5.3 7.7 0.0 2.9 2 1 1 3 3 3 0 Helix-hairpin-helix domain DUF3848 PF12959.7 ORF57274 - 0.29 11.2 7.2 1.4 9.0 1.0 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3848) DUF4296 PF14129.6 ORF57274 - 2.5 8.8 7.5 0.95 10.1 0.2 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4296) zf-ZPR1 PF03367.13 ORF56413 - 1e-44 152.2 0.0 1.7e-44 151.5 0.0 1.4 1 0 0 1 1 1 1 ZPR1 zinc-finger domain COR PF16095.5 ORF54402 - 0.098 12.5 0.9 9.1 6.0 0.1 2.3 2 0 0 2 2 2 0 C-terminal of Roc, COR, domain TetR_C_19 PF17924.1 ORF54402 - 1.7 9.3 9.0 0.54 10.9 0.9 2.8 2 2 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Helicase_C PF00271.31 ORF53171 - 7.5e-21 74.6 0.0 1.3e-20 73.7 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 ORF53171 - 3.7e-12 45.6 0.4 5.1e-12 45.2 0.4 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain PDZ_3 PF17815.1 ORF52688 - 3.7e-44 150.1 0.1 4.6e-44 149.8 0.1 1.1 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 ORF52688 - 8.8e-06 26.0 0.0 0.00038 20.7 0.0 2.2 2 0 0 2 2 2 1 PDZ domain PDZ PF00595.24 ORF52688 - 0.0017 18.6 0.1 0.45 10.9 0.0 2.3 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF52688 - 0.0054 16.6 0.1 3.3 7.6 0.0 2.5 2 0 0 2 2 2 2 PDZ domain PDZ_1 PF12812.7 ORF52688 - 0.1 12.6 0.1 0.76 9.8 0.0 2.3 3 0 0 3 3 3 0 PDZ-like domain Flagellin_N PF00669.20 ORF51236 - 0.12 12.5 0.9 0.24 11.5 0.2 1.7 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region GLTP PF08718.11 ORF51236 - 0.3 11.4 2.5 0.23 11.7 0.5 1.9 2 1 0 2 2 2 0 Glycolipid transfer protein (GLTP) Spore_III_AE PF09546.10 ORF51236 - 0.31 10.2 0.6 0.6 9.3 0.3 1.6 1 1 1 2 2 2 0 Stage III sporulation protein AE (spore_III_AE) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks63.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks63.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks63.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks63.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- 2OG-FeII_Oxy_3 PF13640.6 ORF50872 - 0.01 16.7 0.0 0.017 16.0 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily CDC45 PF02724.14 ORF46383 - 1.8e-09 36.5 17.8 2.3e-09 36.1 17.8 1.1 1 0 0 1 1 1 1 CDC45-like protein CobT PF06213.12 ORF46383 - 0.0018 17.7 9.6 0.0018 17.7 9.6 1.6 2 0 0 2 2 2 1 Cobalamin biosynthesis protein CobT RNA_pol_Rpc4 PF05132.14 ORF46383 - 0.015 15.7 4.7 0.015 15.7 4.7 1.9 2 0 0 2 2 2 0 RNA polymerase III RPC4 CPSF100_C PF13299.6 ORF46383 - 0.3 11.3 9.1 0.09 13.0 5.1 1.9 2 0 0 2 2 2 0 Cleavage and polyadenylation factor 2 C-terminal Sporozoite_P67 PF05642.11 ORF46383 - 1.1 7.2 10.6 1.3 7.0 10.6 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DNA_pol_phi PF04931.13 ORF46383 - 1.8 6.5 16.7 2.4 6.2 16.7 1.1 1 0 0 1 1 1 0 DNA polymerase phi Vfa1 PF08432.10 ORF46383 - 6.4 7.1 21.1 0.81 10.0 15.6 2.1 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 ABC_tran PF00005.27 ORF44542 - 3.1e-39 134.6 0.0 4.3e-39 134.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF44542 - 2.3e-06 27.7 1.0 0.0012 18.7 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 ORF44542 - 3.8e-06 27.2 0.6 2.2e-05 24.7 0.6 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 ORF44542 - 0.0001 21.8 0.0 0.00018 21.0 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 ORF44542 - 0.00018 21.5 0.3 0.00056 19.9 0.2 1.8 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 ORF44542 - 0.0013 19.1 2.8 0.0028 18.1 2.7 1.5 1 1 0 1 1 1 1 AAA ATPase domain Sigma54_activat PF00158.26 ORF44542 - 0.0041 16.8 0.4 0.045 13.4 0.0 2.1 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_29 PF13555.6 ORF44542 - 0.018 14.8 0.1 0.034 13.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain IstB_IS21 PF01695.17 ORF44542 - 0.019 14.7 0.1 0.86 9.3 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_25 PF13481.6 ORF44542 - 0.025 14.2 2.0 0.39 10.3 2.0 2.5 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF44542 - 0.029 14.4 0.1 0.059 13.5 0.1 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase PRK PF00485.18 ORF44542 - 0.055 13.2 0.0 0.079 12.7 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_28 PF13521.6 ORF44542 - 0.084 13.1 0.0 0.2 11.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF44542 - 0.093 12.6 0.0 0.093 12.6 0.0 2.2 2 1 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 ORF44542 - 0.1 13.1 0.0 0.2 12.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 ORF44542 - 0.11 11.7 0.1 0.23 10.6 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain AAA PF00004.29 ORF44542 - 0.12 12.8 0.2 0.43 11.0 0.2 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 ORF44542 - 0.12 12.6 0.0 0.79 10.0 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit G-alpha PF00503.20 ORF44542 - 0.12 11.5 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_5 PF07728.14 ORF44542 - 0.13 12.3 0.4 0.5 10.4 0.2 2.0 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF87 PF01935.17 ORF44542 - 0.16 12.1 0.4 0.34 11.0 0.4 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain Pkinase PF00069.25 ORF44113 - 3.4e-74 249.5 0.0 4.2e-74 249.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44113 - 6.3e-36 124.0 0.0 7.5e-36 123.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF44113 - 0.0062 15.9 0.1 0.009 15.4 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF44113 - 0.015 14.2 0.2 0.02 13.9 0.2 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF44113 - 0.022 14.1 0.0 0.028 13.8 0.0 1.4 1 0 0 1 1 1 0 Kinase-like YcxB PF14317.6 ORF44113 - 0.14 11.9 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 YcxB-like protein Glyco_hydro_38C PF07748.13 ORF43534 - 1.9e-12 47.8 0.0 4e-12 46.7 0.0 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Glyco_hydro38C2 PF17677.1 ORF43534 - 1.2e-05 25.4 0.0 2.1e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Glyco_hydro_38C PF07748.13 ORF43164 - 1.9e-12 47.8 0.0 4e-12 46.7 0.0 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Glyco_hydro38C2 PF17677.1 ORF43164 - 1.2e-05 25.4 0.0 2.1e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Methyltransf_21 PF05050.12 ORF41113 - 0.00028 21.0 0.0 0.00045 20.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain Hydin_ADK PF17213.3 ORF38247 - 3.2 8.0 5.7 4.5 7.5 5.7 1.1 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain Sulfotransfer_1 PF00685.27 ORF35416 - 0.0066 16.0 0.1 0.0094 15.5 0.1 1.3 1 0 0 1 1 1 1 Sulfotransferase domain IF4E PF01652.18 ORF35114 - 4.9e-29 101.2 1.6 6.5e-29 100.8 1.6 1.2 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E MFS_1 PF07690.16 ORF33508 - 2.9e-16 59.4 22.3 2.9e-16 59.4 22.3 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF1275 PF06912.11 ORF33459 - 3.2e-22 79.4 11.4 3.2e-22 79.4 11.4 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1275) GED PF02212.18 ORF33203 - 2.1e-17 63.0 1.1 1.1e-08 35.1 0.0 2.1 2 0 0 2 2 2 2 Dynamin GTPase effector domain Acyltransferase PF01553.21 ORF32942 - 2.2e-09 37.0 0.0 3.9e-09 36.2 0.0 1.4 1 0 0 1 1 1 1 Acyltransferase DAGAT PF03982.13 ORF32942 - 2.1e-08 33.5 0.0 3e-08 33.0 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol acyltransferase ThiF PF00899.21 ORF31676 - 4.6e-37 127.7 1.4 7e-37 127.1 1.4 1.2 1 0 0 1 1 1 1 ThiF family UDPG_MGDP_dh_N PF03721.14 ORF31676 - 0.00074 19.1 1.0 0.0016 18.1 1.0 1.7 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DAO PF01266.24 ORF31676 - 0.0011 18.6 1.6 0.0017 18.0 1.6 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase Sacchrp_dh_NADP PF03435.18 ORF31676 - 0.0012 19.2 1.5 0.0059 16.9 1.5 2.0 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 ORF31676 - 0.0052 17.2 0.4 0.02 15.3 0.4 2.0 1 1 0 1 1 1 1 Putative NAD(P)-binding 3HCDH_N PF02737.18 ORF31676 - 0.019 14.9 0.1 0.029 14.3 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 ORF31676 - 0.044 13.5 0.0 0.075 12.7 0.0 1.4 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ApbA PF02558.16 ORF31676 - 0.12 12.0 0.1 0.21 11.2 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 ORF27528 - 4.8e-08 32.6 0.0 6.1e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF27528 - 8.5e-07 28.5 0.0 1.2e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF27528 - 0.00024 20.3 1.5 0.027 13.6 0.5 2.4 3 0 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 ORF27528 - 0.0092 16.2 0.3 0.019 15.2 0.3 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF27528 - 0.014 14.6 0.1 0.032 13.5 0.1 1.5 2 0 0 2 2 2 0 Thi4 family HI0933_like PF03486.14 ORF27528 - 0.018 13.7 1.1 0.034 12.8 0.5 1.7 3 0 0 3 3 3 0 HI0933-like protein Pyr_redox PF00070.27 ORF27528 - 0.031 14.8 0.0 3.1 8.4 0.1 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF27528 - 0.077 12.2 0.0 0.46 9.7 0.1 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF229 PF02995.17 ORF27414 - 2.4e-09 36.4 1.8 4.7e-09 35.4 1.8 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Exonuc_VII_L PF02601.15 ORF23643 - 0.0044 16.6 17.8 0.0044 16.6 17.8 1.9 1 1 1 2 2 2 1 Exonuclease VII, large subunit UPF0242 PF06785.11 ORF23643 - 6 6.9 38.9 0.03 14.4 27.9 2.1 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus V_ATPase_I PF01496.19 ORF23643 - 8.3 4.2 19.8 11 3.8 19.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family OTU PF02338.19 ORF22277 - 0.044 14.3 0.6 0.088 13.3 0.0 1.8 2 0 0 2 2 2 0 OTU-like cysteine protease Hydrolase_4 PF12146.8 ORF22232 - 1.7e-16 60.2 0.0 4.6e-11 42.4 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 AXE1 PF05448.12 ORF22232 - 2.3e-13 49.5 0.4 3.3e-05 22.7 0.1 3.2 2 1 1 3 3 3 3 Acetyl xylan esterase (AXE1) Abhydrolase_1 PF00561.20 ORF22232 - 7.5e-09 35.6 0.1 4.1e-05 23.3 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 ORF22232 - 1.9e-07 31.2 1.2 0.0013 18.6 0.0 3.2 2 1 0 3 3 3 2 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 ORF22232 - 0.00016 21.6 0.0 0.00034 20.5 0.0 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 ORF22232 - 0.0002 21.0 0.0 0.31 10.6 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family Abhydrolase_5 PF12695.7 ORF22232 - 0.00026 20.8 0.0 0.16 11.7 0.0 2.4 1 1 1 2 2 2 2 Alpha/beta hydrolase family FSH1 PF03959.13 ORF22232 - 0.00049 19.8 0.0 0.0012 18.6 0.0 1.7 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S9 PF00326.21 ORF22232 - 0.00078 19.0 0.0 0.0016 17.9 0.0 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF22232 - 0.0078 16.8 0.0 0.0099 16.5 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Lipase_3 PF01764.25 ORF22232 - 0.028 14.3 0.0 0.089 12.7 0.0 1.8 2 0 0 2 2 2 0 Lipase (class 3) WD40 PF00400.32 ORF20766 - 1.1e-14 54.5 4.4 0.037 14.9 0.1 5.3 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF20766 - 0.0024 18.2 0.0 1.5 9.2 0.0 2.9 3 0 0 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain DUF1513 PF07433.11 ORF20766 - 0.0047 16.1 0.2 0.025 13.7 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF1513) Nup160 PF11715.8 ORF20766 - 0.015 14.0 0.3 0.37 9.4 0.2 2.1 1 1 1 2 2 2 0 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF20766 - 0.11 11.2 0.0 11 4.6 0.0 2.3 1 1 1 2 2 2 0 Nup133 N terminal like Podoplanin PF05808.11 ORF17639 - 0.016 15.4 0.3 0.034 14.2 0.3 1.5 1 1 0 1 1 1 0 Podoplanin Rax2 PF12768.7 ORF17639 - 0.033 13.6 0.1 0.2 11.1 0.0 1.9 2 0 0 2 2 2 0 Cortical protein marker for cell polarity Ribosomal_S8 PF00410.19 ORF17639 - 0.1 12.6 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein S8 fn3 PF00041.21 ORF17251 - 3.4e-30 104.2 0.0 3.7e-11 43.2 0.1 3.2 3 0 0 3 3 3 3 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 ORF17251 - 1.2e-09 38.6 0.0 0.00051 20.6 0.0 3.4 3 1 0 3 3 3 2 Purple acid Phosphatase, N-terminal domain DUF2369 PF10179.9 ORF17251 - 0.028 14.8 0.0 3.8 8.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2369) Y_Y_Y PF07495.13 ORF17251 - 0.082 12.9 0.0 7 6.7 0.0 2.9 3 0 0 3 3 3 0 Y_Y_Y domain Aminotran_3 PF00202.21 ORF16763 - 4.7e-93 312.0 0.1 5.2e-93 311.9 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Pannexin_like PF12534.8 ORF15688 - 0.0087 15.2 0.2 0.015 14.4 0.2 1.4 1 0 0 1 1 1 1 Pannexin-like TM region of LRRC8 LysR_substrate PF03466.20 ORF14377 - 2e-19 69.8 0.0 2.6e-19 69.4 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF14377 - 0.016 15.2 0.1 0.034 14.1 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family cNMP_binding PF00027.29 ORF14242 - 0.11 12.6 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Methyltransf_25 PF13649.6 ORF110346 - 2.7e-11 44.0 0.0 6.1e-11 42.9 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF110346 - 1.6e-10 41.1 0.0 6.8e-10 39.0 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF110346 - 3.9e-10 39.7 0.0 6.8e-10 38.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF110346 - 9.1e-10 39.1 0.0 1.8e-09 38.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF110346 - 1.4e-08 35.4 0.0 5.1e-08 33.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF110346 - 8.9e-05 21.9 0.0 0.00013 21.3 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.6 ORF110346 - 0.00021 21.3 0.0 0.00033 20.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF110346 - 0.00021 20.9 0.1 0.00068 19.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase small domain PrmA PF06325.13 ORF110346 - 0.023 14.1 0.0 0.037 13.4 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) MetW PF07021.12 ORF110346 - 0.1 12.1 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW DUF1275 PF06912.11 ORF110294 - 3.2e-22 79.4 11.4 3.2e-22 79.4 11.4 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1275) Ank_2 PF12796.7 ORF109498 - 2.7e-28 98.4 4.4 1.2e-16 61.1 0.3 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF109498 - 3.6e-27 94.1 11.9 1.5e-09 37.9 0.2 5.0 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF109498 - 2.7e-22 78.2 12.4 5.8e-05 23.4 0.1 5.6 5 0 0 5 5 5 5 Ankyrin repeat Ank_4 PF13637.6 ORF109498 - 3.5e-22 78.5 10.8 2.4e-09 37.5 0.1 4.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF109498 - 6.4e-18 63.0 3.0 0.023 15.2 0.1 5.7 6 0 0 6 6 6 4 Ankyrin repeat ubiquitin PF00240.23 ORF109498 - 0.00069 19.3 0.1 0.0011 18.6 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin family Iso_dh PF00180.20 ORF108045 - 1.8e-81 274.0 0.0 2e-81 273.9 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase fn3 PF00041.21 ORF104640 - 3.4e-30 104.2 0.0 3.7e-11 43.2 0.1 3.2 3 0 0 3 3 3 3 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 ORF104640 - 1.2e-09 38.6 0.0 0.00051 20.6 0.0 3.4 3 1 0 3 3 3 2 Purple acid Phosphatase, N-terminal domain DUF2369 PF10179.9 ORF104640 - 0.028 14.8 0.0 3.8 8.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2369) Y_Y_Y PF07495.13 ORF104640 - 0.082 12.9 0.0 7 6.7 0.0 2.9 3 0 0 3 3 3 0 Y_Y_Y domain DUF1275 PF06912.11 ORF100695 - 3.2e-22 79.4 11.4 3.2e-22 79.4 11.4 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1275) zf-C2H2 PF00096.26 ORF100188 - 2.7e-05 24.4 11.0 0.014 15.8 2.0 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF100188 - 0.00029 21.4 10.8 0.0074 17.0 2.2 2.5 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_2 PF12756.7 ORF100188 - 0.046 14.1 6.9 0.46 10.9 2.0 2.9 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 ORF100188 - 0.059 13.1 3.9 0.11 12.3 3.9 1.4 1 0 0 1 1 1 0 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF100188 - 0.26 11.6 10.8 3.1 8.2 1.3 2.8 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding DUF4187 PF13821.6 ORF100188 - 1.7 8.5 8.4 9.8 6.1 0.1 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4187) zf-BED PF02892.15 ORF100188 - 8.4 6.5 8.8 9.2 6.4 3.4 2.6 1 1 1 2 2 2 0 BED zinc finger MtrF PF09472.10 NODE_26698_length_800_cov_4.299346_g20893_i0forward_frame_1 - 0.19 11.1 0.0 0.31 10.5 0.0 1.3 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Band_7 PF01145.25 NODE_26653_length_801_cov_4.065274_g20856_i0forward_frame_1 - 6.4e-34 117.5 0.5 6.4e-34 117.5 0.5 2.1 1 1 1 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 NODE_26653_length_801_cov_4.065274_g20856_i0forward_frame_1 - 2.2e-06 27.6 0.3 4.1e-06 26.7 0.3 1.5 1 0 0 1 1 1 1 C-terminal region of band_7 Flot PF15975.5 NODE_26653_length_801_cov_4.065274_g20856_i0forward_frame_1 - 0.0073 16.5 4.1 0.0073 16.5 4.1 2.6 3 0 0 3 3 3 1 Flotillin Band_7_1 PF13421.6 NODE_26653_length_801_cov_4.065274_g20856_i0forward_frame_1 - 0.1 12.3 0.1 0.29 10.8 0.1 1.7 2 0 0 2 2 2 0 SPFH domain-Band 7 family OppC_N PF12911.7 NODE_26647_length_801_cov_71.943864_g20851_i0forward_frame_1 - 0.037 14.0 0.1 0.037 14.0 0.1 2.3 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C L_lactis_ph-MCP PF06673.11 NODE_26595_length_802_cov_71.704042_g20809_i0forward_frame_3 - 0.0064 15.5 2.4 0.13 11.2 0.3 2.2 2 0 0 2 2 2 2 Lactococcus lactis bacteriophage major capsid protein 7tm_3 PF00003.22 NODE_26554_length_802_cov_1424.646675_g18115_i2reverse_frame_3 - 0.0078 16.0 0.3 0.0091 15.7 0.3 1.1 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR MscS_TM PF12794.7 NODE_26554_length_802_cov_1424.646675_g18115_i2reverse_frame_3 - 0.015 14.1 0.2 0.023 13.6 0.2 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 CttA_N PF18244.1 NODE_26554_length_802_cov_1424.646675_g18115_i2reverse_frame_3 - 0.017 15.5 0.0 0.034 14.6 0.0 1.4 1 0 0 1 1 1 0 Cellulose-binding protein CttA N-terminal domain DUF2207 PF09972.9 NODE_26554_length_802_cov_1424.646675_g18115_i2reverse_frame_3 - 0.088 11.6 0.1 0.11 11.2 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MARVEL PF01284.23 NODE_26554_length_802_cov_1424.646675_g18115_i2reverse_frame_3 - 0.17 11.9 3.8 0.25 11.4 3.8 1.2 1 0 0 1 1 1 0 Membrane-associating domain DUF4239 PF14023.6 NODE_26554_length_802_cov_1424.646675_g18115_i2reverse_frame_3 - 0.17 11.6 0.4 0.32 10.7 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF2273 PF10031.9 NODE_26554_length_802_cov_1424.646675_g18115_i2reverse_frame_3 - 10 6.3 8.5 0.83 9.7 0.4 2.3 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) SDA1 PF05285.12 NODE_26551_length_802_cov_2158.219035_g20427_i2reverse_frame_3 - 2.1 7.7 11.3 2.3 7.5 11.3 1.1 1 0 0 1 1 1 0 SDA1 BRX PF08381.11 NODE_26549_length_803_cov_1.697917_g20773_i0forward_frame_3 - 0.027 13.8 1.8 0.058 12.8 1.8 1.5 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 YrhK PF14145.6 NODE_26471_length_804_cov_397.856957_g20708_i0reverse_frame_3 - 0.065 13.1 0.7 0.17 11.8 0.7 1.7 1 0 0 1 1 1 0 YrhK-like protein Asp PF00026.23 NODE_26471_length_804_cov_397.856957_g20708_i0forward_frame_3 - 2.1e-29 103.0 1.3 2.6e-29 102.7 1.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_26471_length_804_cov_397.856957_g20708_i0forward_frame_3 - 3.5e-05 24.1 0.4 0.00017 21.8 0.2 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal Cwf_Cwc_15 PF04889.12 ORF98192 - 0.22 11.2 24.8 0.31 10.7 24.8 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Macoilin PF09726.9 ORF98192 - 0.79 8.2 14.1 0.95 7.9 14.1 1.1 1 0 0 1 1 1 0 Macoilin family Ndc1_Nup PF09531.10 ORF98192 - 0.94 8.1 8.5 1 8.0 8.5 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup SMYLE_N PF18615.1 ORF98192 - 0.99 8.9 14.9 1.3 8.5 14.9 1.1 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain Neur_chan_memb PF02932.16 ORF98192 - 5.9 6.9 10.1 9.3 6.2 10.1 1.4 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region zf-H3C2 PF16721.5 ORF95413 - 0.04 14.3 0.0 0.084 13.2 0.0 1.6 1 0 0 1 1 1 0 Zinc-finger like, probable DNA-binding Dsh_C PF12316.8 ORF95413 - 5.3 7.4 9.5 7.2 7.0 9.5 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Presenilin PF01080.17 ORF95413 - 5.8 5.6 8.4 6.8 5.3 8.4 1.3 1 0 0 1 1 1 0 Presenilin Sec20 PF03908.13 ORF9384 - 0.1 12.5 4.6 0.69 9.9 0.1 2.9 2 1 0 2 2 2 0 Sec20 DnaI_N PF07319.11 ORF9384 - 0.2 12.4 5.9 0.86 10.3 0.2 3.0 2 2 1 3 3 3 0 Primosomal protein DnaI N-terminus Peptidase_M3_N PF08439.10 ORF9384 - 0.3 11.4 0.2 0.3 11.4 0.2 3.0 3 0 0 3 3 3 0 Oligopeptidase F PET PF06297.14 ORF9384 - 0.33 11.3 1.7 0.48 10.8 0.1 2.0 2 0 0 2 2 2 0 PET Domain Spc7 PF08317.11 ORF9384 - 0.38 9.6 18.2 0.33 9.8 4.1 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF4296 PF14129.6 ORF9384 - 0.39 11.4 4.3 0.53 10.9 0.2 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4296) Allexi_40kDa PF05549.11 ORF9384 - 2.3 7.6 7.0 0.46 10.0 1.9 1.9 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF948 PF06103.11 ORF9384 - 2.8 8.2 4.9 11 6.3 1.4 2.7 2 2 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1002 PF06207.11 ORF9384 - 3 7.3 13.6 0.31 10.5 3.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1002) HAUS-augmin3 PF14932.6 ORF9384 - 9.1 5.8 15.3 2.3 7.7 9.2 2.2 1 1 0 2 2 2 0 HAUS augmin-like complex subunit 3 SHIPPO-rpt PF07004.12 ORF93075 - 1.3e-14 54.3 48.0 0.058 14.3 0.5 8.4 8 0 0 8 8 8 8 Sperm-tail PG-rich repeat Bax1-I PF01027.20 ORF89051 - 1.7e-11 44.4 32.4 1.9e-11 44.2 32.4 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Hydrolase_4 PF12146.8 ORF88492 - 1.7e-16 60.2 0.0 4.6e-11 42.4 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 AXE1 PF05448.12 ORF88492 - 2.3e-13 49.5 0.4 3.3e-05 22.7 0.1 3.2 2 1 1 3 3 3 3 Acetyl xylan esterase (AXE1) Abhydrolase_1 PF00561.20 ORF88492 - 7.4e-09 35.6 0.1 4.1e-05 23.3 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 ORF88492 - 1.8e-07 31.2 1.3 0.0013 18.6 0.0 3.3 2 1 0 3 3 3 2 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 ORF88492 - 0.00016 21.6 0.0 0.00034 20.5 0.0 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 ORF88492 - 0.0002 21.0 0.0 0.31 10.6 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family Abhydrolase_5 PF12695.7 ORF88492 - 0.00026 20.8 0.0 0.16 11.7 0.0 2.4 1 1 1 2 2 2 2 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF88492 - 0.00042 19.9 0.0 0.00083 18.9 0.0 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase family FSH1 PF03959.13 ORF88492 - 0.00048 19.8 0.0 0.0012 18.6 0.0 1.7 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_6 PF12697.7 ORF88492 - 0.0077 16.8 0.0 0.0099 16.5 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Lipase_3 PF01764.25 ORF88492 - 0.016 15.0 0.0 0.088 12.7 0.0 2.0 2 0 0 2 2 2 0 Lipase (class 3) Ribonuc_red_lgC PF02867.15 ORF8529 - 1.3e-59 202.2 0.7 1.9e-57 195.0 0.7 2.0 1 1 0 1 1 1 1 Ribonucleotide reductase, barrel domain Tox-ART-HYD1 PF15633.6 ORF8529 - 0.16 12.7 0.1 26 5.6 0.0 2.4 2 0 0 2 2 2 0 HYD1 signature containing ADP-ribosyltransferase UQ_con PF00179.26 ORF83278 - 2.6e-09 36.9 0.0 6.2e-08 32.4 0.0 2.3 2 0 0 2 2 2 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF83278 - 0.0026 17.4 0.0 0.0059 16.3 0.0 1.6 1 0 0 1 1 1 1 Prokaryotic E2 family B LETM1 PF07766.13 ORF83278 - 0.12 11.7 10.3 0.18 11.1 10.3 1.2 1 0 0 1 1 1 0 LETM1-like protein HTH_57 PF18679.1 ORF83278 - 0.21 11.9 1.7 0.4 11.0 1.7 1.4 1 0 0 1 1 1 0 ThcOx helix turn helix domain RWD PF05773.22 ORF83278 - 0.25 11.6 5.2 0.72 10.2 5.0 1.9 1 1 0 1 1 1 0 RWD domain PEHE PF15275.6 ORF83278 - 0.34 11.5 4.8 0.52 10.9 4.8 1.3 1 0 0 1 1 1 0 PEHE domain Exonuc_VII_L PF02601.15 ORF83278 - 2.2 7.8 7.9 3 7.3 7.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit TMPIT PF07851.13 ORF83278 - 6.2 6.0 9.5 8.5 5.5 9.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein EF-hand_6 PF13405.6 ORF8231 - 0.0033 17.2 0.0 0.007 16.2 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF8231 - 0.007 15.8 0.0 0.015 14.8 0.0 1.6 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF8231 - 0.0084 15.9 0.0 0.028 14.2 0.0 1.8 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF8231 - 0.01 16.2 0.0 0.019 15.4 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF8231 - 0.077 13.3 0.0 0.15 12.4 0.0 1.5 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF8231 - 0.16 11.8 0.0 0.33 10.9 0.0 1.4 1 0 0 1 1 1 0 EF hand FHA PF00498.26 ORF79623 - 1.3e-15 57.5 0.0 4e-15 55.9 0.0 1.8 2 0 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 ORF79623 - 9.9e-05 22.6 0.0 0.00023 21.4 0.0 1.6 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain 2OG-FeII_Oxy_3 PF13640.6 ORF73942 - 6e-09 36.7 0.0 1.1e-08 35.9 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF73942 - 0.0012 19.4 0.0 0.006 17.2 0.0 1.9 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 ORF73942 - 0.15 12.5 0.0 0.26 11.7 0.0 1.4 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase adh_short PF00106.25 ORF70114 - 4.9e-37 127.3 0.2 7.4e-37 126.7 0.2 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF70114 - 2.9e-31 108.8 0.2 3.8e-31 108.4 0.2 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF70114 - 5.6e-07 29.6 0.1 8.4e-07 29.1 0.1 1.2 1 0 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF70114 - 0.026 14.8 0.1 0.045 14.0 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain PhaC_N PF07167.13 ORF70114 - 0.035 13.8 0.0 0.057 13.1 0.0 1.3 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RLL PF10036.9 ORF69426 - 5e-49 167.5 0.2 6.1e-49 167.2 0.2 1.1 1 0 0 1 1 1 1 RNA transcription, translation and transport factor protein Goodbye PF17109.5 ORF62359 - 0.11 13.0 0.7 0.22 12.0 0.3 1.7 1 1 0 1 1 1 0 fungal STAND N-terminal Goodbye domain ArfGap PF01412.18 ORF62069 - 4.6e-24 84.8 0.0 6.9e-24 84.2 0.0 1.3 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf PilJ PF13675.6 ORF62069 - 0.0042 17.1 0.6 0.089 12.8 0.0 2.4 2 0 0 2 2 2 1 Type IV pili methyl-accepting chemotaxis transducer N-term PALP PF00291.25 ORF61218 - 4.7e-39 134.5 0.1 5.4e-39 134.4 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme NTPase_P4 PF11602.8 ORF61218 - 0.1 11.8 0.0 0.22 10.7 0.0 1.4 2 0 0 2 2 2 0 ATPase P4 of dsRNA bacteriophage phi-12 MORN PF02493.20 ORF60718 - 4.4e-17 60.9 36.7 0.0015 18.3 0.1 9.5 10 0 0 10 10 10 6 MORN repeat Pyrophosphatase PF00719.19 ORF60083 - 6e-33 113.9 0.1 8.3e-33 113.5 0.1 1.1 1 0 0 1 1 1 1 Inorganic pyrophosphatase Arm PF00514.23 ORF58736 - 0.0012 18.8 1.6 2.7 8.2 0.2 3.9 4 0 0 4 4 4 2 Armadillo/beta-catenin-like repeat KGG PF10685.9 ORF58736 - 0.31 11.4 0.4 0.31 11.4 0.4 2.0 2 0 0 2 2 2 0 Stress-induced bacterial acidophilic repeat motif N_methyl PF07963.12 ORF5703 - 5.3e-09 35.3 0.6 9.2e-09 34.5 0.6 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif STI1 PF17830.1 ORF55725 - 1.5e-14 53.6 6.6 2.7e-14 52.8 6.6 1.4 1 0 0 1 1 1 1 STI1 domain TPR_2 PF07719.17 ORF55725 - 6.3e-05 22.8 10.8 0.012 15.7 0.1 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF55725 - 0.00068 19.7 0.4 0.0012 18.9 0.4 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF55725 - 0.0013 18.5 7.6 0.12 12.2 0.2 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat Rrn6 PF10214.9 ORF55725 - 0.0013 17.3 3.0 0.0018 16.9 3.0 1.0 1 0 0 1 1 1 1 RNA polymerase I-specific transcription-initiation factor TPR_17 PF13431.6 ORF55725 - 0.0014 18.9 0.6 0.0084 16.4 0.0 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat DUF4572 PF15139.6 ORF55725 - 0.022 14.7 1.3 0.03 14.3 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4572) TPR_8 PF13181.6 ORF55725 - 0.066 13.5 2.3 2.4 8.6 0.1 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat PTPRCAP PF15713.5 ORF55725 - 0.071 13.4 3.2 0.11 12.8 3.2 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated DUF3437 PF11919.8 ORF55725 - 0.2 11.6 0.1 0.91 9.5 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3437) TPR_12 PF13424.6 ORF55725 - 1.5 9.2 5.5 0.47 10.8 0.2 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF55725 - 1.6 9.7 3.5 13 6.9 0.0 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat Peptidase_U57 PF05582.12 ORF55725 - 2.3 7.4 4.5 3.1 7.0 4.5 1.1 1 0 0 1 1 1 0 YabG peptidase U57 Atg14 PF10186.9 ORF55725 - 3.8 6.5 7.7 5.1 6.1 7.7 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Borrelia_P83 PF05262.11 ORF55725 - 9.4 4.6 11.2 13 4.1 11.2 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein AMPK1_CBM PF16561.5 ORF55353 - 1e-05 25.7 0.2 0.11 12.7 0.0 2.8 2 1 1 3 3 3 2 Glycogen recognition site of AMP-activated protein kinase CBM_35 PF16990.5 ORF55353 - 0.16 12.3 0.0 0.78 10.0 0.0 2.0 2 0 0 2 2 2 0 Carbohydrate binding module (family 35) HEAT_2 PF13646.6 ORF49194 - 2.6e-18 66.2 3.6 6.2e-09 36.1 0.5 2.8 1 1 0 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF49194 - 1.9e-11 43.2 6.1 0.072 13.4 0.1 5.5 5 0 0 5 5 5 4 HEAT repeat RTP1_C1 PF10363.9 ORF49194 - 6.2e-08 32.8 0.0 0.056 13.6 0.0 4.2 1 1 3 4 4 4 2 Required for nuclear transport of RNA pol II C-terminus 1 HEAT_PBS PF03130.16 ORF49194 - 9e-06 25.9 1.1 1.4 9.8 0.6 5.0 4 1 0 4 4 4 1 PBS lyase HEAT-like repeat Cnd1 PF12717.7 ORF49194 - 1.6e-05 25.0 0.6 0.0088 16.1 0.1 2.9 1 1 1 2 2 2 2 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 ORF49194 - 0.00028 21.3 11.1 0.0041 17.6 1.0 4.2 4 2 0 4 4 4 2 HEAT-like repeat Adaptin_N PF01602.20 ORF49194 - 0.00039 19.1 0.1 0.0035 16.0 0.1 2.0 1 1 0 1 1 1 1 Adaptin N terminal region Arm PF00514.23 ORF49194 - 0.036 14.1 1.4 10 6.4 0.1 3.8 3 1 2 5 5 5 0 Armadillo/beta-catenin-like repeat ERAP1_C PF11838.8 ORF49194 - 0.19 11.2 0.1 0.46 10.0 0.1 1.4 1 1 0 1 1 1 0 ERAP1-like C-terminal domain PP2C PF00481.21 ORF48007 - 7.9e-45 153.5 0.8 9.6e-45 153.2 0.8 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF48007 - 3.1e-09 36.8 0.4 6.7e-09 35.7 0.4 1.6 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF48007 - 3.5e-05 23.8 0.9 0.0044 17.0 0.1 2.1 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) RCC1 PF00415.18 ORF47689 - 1.6e-52 175.9 0.0 1.4e-12 48.0 0.0 5.2 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF47689 - 3.2e-33 112.8 8.6 8.2e-07 28.7 0.1 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat PapC_C PF13953.6 ORF47689 - 0.034 14.0 0.0 32 4.4 0.0 3.4 3 0 0 3 3 3 0 PapC C-terminal domain PQQ_3 PF13570.6 ORF47689 - 0.054 14.0 0.2 17 6.0 0.0 3.5 4 0 0 4 4 4 0 PQQ-like domain Kelch_6 PF13964.6 ORF47689 - 0.8 10.1 3.1 6 7.3 0.0 3.3 4 0 0 4 4 4 0 Kelch motif Cullin PF00888.22 ORF40679 - 9.2e-47 160.0 3.5 9.2e-47 160.0 3.5 1.8 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF40679 - 4.7e-24 84.2 2.2 1.1e-23 83.1 2.2 1.6 1 0 0 1 1 1 1 Cullin protein neddylation domain FAM76 PF16046.5 ORF40679 - 2 7.7 4.5 2.6 7.3 4.5 1.1 1 0 0 1 1 1 0 FAM76 protein IF4E PF01652.18 ORF40113 - 1.2e-35 122.7 0.0 1.6e-35 122.3 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E TPR_2 PF07719.17 ORF39405 - 2.3e-07 30.4 0.0 0.0098 15.9 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF39405 - 2e-06 27.4 0.1 0.0011 18.6 0.0 3.5 3 1 0 3 3 3 1 Tetratricopeptide repeat eIF3_subunit PF08597.10 ORF39405 - 0.0044 17.0 0.3 0.0082 16.1 0.3 1.5 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit TPR_14 PF13428.6 ORF39405 - 0.067 14.0 0.0 6 8.0 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Spore_II_R PF09551.10 ORF39405 - 0.072 13.6 0.7 2.8 8.4 0.1 2.3 2 0 0 2 2 2 0 Stage II sporulation protein R (spore_II_R) Fis1_TPR_C PF14853.6 ORF39405 - 0.13 12.4 1.6 0.25 11.4 0.0 2.3 3 0 0 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat TPR_MLP1_2 PF07926.12 ORF38500 - 0.011 15.8 22.9 0.37 10.9 5.2 2.4 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Leu_zip PF15294.6 ORF38500 - 0.013 15.1 4.2 0.013 15.1 4.2 2.1 1 1 1 2 2 2 0 Leucine zipper IFT57 PF10498.9 ORF38500 - 0.61 9.0 15.2 0.8 8.6 13.2 1.8 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Jnk-SapK_ap_N PF09744.9 ORF38500 - 0.77 10.0 26.3 0.47 10.7 4.5 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 AAA_13 PF13166.6 ORF38500 - 0.85 8.2 13.4 16 4.0 13.1 1.9 1 1 0 1 1 1 0 AAA domain DUF4047 PF13256.6 ORF38500 - 0.86 9.8 4.7 0.27 11.4 1.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) GAS PF13851.6 ORF38500 - 1.1 8.6 22.7 3.5 6.9 13.8 2.2 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Lebercilin PF15619.6 ORF38500 - 1.1 8.9 25.3 0.22 11.1 13.8 2.7 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF4446 PF14584.6 ORF38500 - 1.7 8.6 7.9 0.55 10.2 2.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) DUF2756 PF10956.8 ORF38500 - 2.2 8.8 7.7 1.8 9.1 1.8 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2756) DUF148 PF02520.17 ORF38500 - 2.6 8.2 7.4 7.4 6.7 0.2 2.4 2 1 0 2 2 2 0 Domain of unknown function DUF148 CREPT PF16566.5 ORF38500 - 3.4 7.8 16.6 10 6.2 6.1 2.5 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour DivIC PF04977.15 ORF38500 - 3.5 7.5 16.9 0.85 9.4 4.0 3.4 2 1 1 3 3 3 0 Septum formation initiator Uso1_p115_C PF04871.13 ORF38500 - 4.1 7.8 22.5 0.48 10.8 10.9 2.2 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region FapA PF03961.13 ORF38500 - 5 5.6 11.2 3.1 6.3 8.4 1.8 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF1664 PF07889.12 ORF38500 - 7.7 6.6 11.4 6.2 6.9 2.3 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF38500 - 7.8 5.7 20.7 7.1 5.8 10.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) eIF-4B PF06273.11 ORF38500 - 9 5.2 10.1 2.2 7.2 6.8 1.5 1 1 1 2 2 2 0 Plant specific eukaryotic initiation factor 4B TMF_DNA_bd PF12329.8 ORF38500 - 9 6.4 14.8 1.4 8.9 0.3 3.0 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF5595 PF18077.1 ORF38500 - 9.4 6.4 7.4 1.8 8.7 1.9 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF5595) DUF2807 PF10988.8 ORF36547 - 0.022 14.6 0.3 0.072 12.9 0.3 1.9 1 1 0 1 1 1 0 Putative auto-transporter adhesin, head GIN domain Glyco_transf_41 PF13844.6 ORF35056 - 1.1e-22 80.1 0.1 1.5e-20 73.1 0.0 2.0 2 0 0 2 2 2 2 Glycosyl transferase family 41 SH3_9 PF14604.6 ORF33947 - 0.00071 19.4 0.1 0.0019 18.0 0.1 1.7 1 0 0 1 1 1 1 Variant SH3 domain SH3_2 PF07653.17 ORF33947 - 0.0033 17.1 0.1 0.0074 16.0 0.1 1.6 1 0 0 1 1 1 1 Variant SH3 domain Herpes_UL49_2 PF04823.12 ORF33947 - 0.018 15.1 0.5 0.73 10.0 0.2 2.2 1 1 1 2 2 2 0 Herpesvirus UL49 tegument protein zf-XS PF03470.14 ORF33947 - 0.033 14.4 1.5 1.7 9.0 0.3 3.1 3 0 0 3 3 3 0 XS zinc finger domain Peptidase_S10 PF00450.22 ORF30681 - 1.4e-61 209.2 0.0 1.6e-61 209.0 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase PRMT5_C PF17286.2 ORF2978 - 0.015 15.2 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 PRMT5 oligomerisation domain DUF3449 PF11931.8 ORF2978 - 0.24 11.2 0.0 0.37 10.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) Pyr_redox_2 PF07992.14 ORF29568 - 4e-14 52.5 0.0 5.3e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF29568 - 0.0029 18.1 0.1 0.014 15.9 0.0 2.2 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF29568 - 0.018 14.3 0.0 0.15 11.3 0.0 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Oscp1 PF10188.9 ORF29300 - 2.2e-61 207.0 7.3 2.7e-61 206.7 7.3 1.1 1 0 0 1 1 1 1 Organic solute transport protein 1 NAD_binding_11 PF14833.6 ORF25244 - 5.7e-26 91.1 0.2 8.4e-26 90.6 0.2 1.3 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NAD_binding_2 PF03446.15 ORF25244 - 1.5e-15 57.7 0.0 2.7e-15 56.9 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase DUF5010_C PF18099.1 ORF25244 - 0.13 12.4 0.0 0.39 10.9 0.0 1.7 2 0 0 2 2 2 0 DUF5010 C-terminal domain TPP_enzyme_C PF02775.21 ORF24920 - 1.9e-40 138.1 0.4 2.5e-40 137.8 0.4 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Phage_holin_3_2 PF04550.12 ORF24920 - 0.12 12.9 0.1 0.28 11.7 0.1 1.7 1 1 0 1 1 1 0 Phage holin family 2 SLT_2 PF13406.6 ORF23520 - 1.3e-85 287.2 0.1 1.5e-85 287.0 0.1 1.0 1 0 0 1 1 1 1 Transglycosylase SLT domain Glucosaminidase PF01832.20 ORF23520 - 0.014 15.9 0.0 0.016 15.7 0.0 1.5 1 1 0 1 1 1 0 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SLT PF01464.20 ORF23520 - 0.085 12.5 0.0 0.43 10.3 0.0 2.0 1 1 0 1 1 1 0 Transglycosylase SLT domain Sec8_exocyst PF04048.14 ORF22109 - 0.046 13.6 7.0 0.093 12.6 6.7 1.8 1 1 0 1 1 1 0 Sec8 exocyst complex component specific domain SOGA PF11365.8 ORF22109 - 0.088 14.0 12.8 3.3 8.9 0.8 3.4 2 1 1 3 3 3 0 Protein SOGA Fez1 PF06818.15 ORF22109 - 0.44 11.0 15.1 1.1 9.6 15.1 1.8 1 1 0 1 1 1 0 Fez1 Occludin_ELL PF07303.13 ORF22109 - 1.2 9.9 9.1 28 5.5 1.9 3.0 2 1 1 3 3 3 0 Occludin homology domain CAMSAP_CC1 PF17095.5 ORF14120 - 0.96 9.4 12.6 1.2 9.0 3.9 2.7 2 0 0 2 2 2 0 Spectrin-binding region of Ca2+-Calmodulin Peroxin-13_N PF04088.13 ORF14120 - 1.5 9.1 5.1 1.1 9.5 2.2 2.1 2 0 0 2 2 2 0 Peroxin 13, N-terminal region YvrJ PF12841.7 ORF14120 - 2.5 7.7 6.4 14 5.3 0.2 3.3 4 0 0 4 4 4 0 YvrJ protein family ER_lumen_recept PF00810.18 ORF12816 - 1.1e-30 107.4 1.0 1.1e-30 107.4 1.0 1.9 2 0 0 2 2 2 1 ER lumen protein retaining receptor AA_permease_2 PF13520.6 ORF12816 - 0.056 12.3 10.6 0.02 13.7 7.9 1.6 1 1 0 1 1 1 0 Amino acid permease BA14K PF07886.11 ORF12816 - 0.13 12.1 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 BA14K-like protein RLL PF10036.9 ORF11860 - 5e-49 167.5 0.2 6.1e-49 167.2 0.2 1.1 1 0 0 1 1 1 1 RNA transcription, translation and transport factor protein Ank_2 PF12796.7 ORF109783 - 1.4e-47 160.1 7.9 3.8e-19 69.1 0.4 3.7 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF109783 - 8.9e-31 105.9 9.6 4.2e-09 36.8 0.1 4.4 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF109783 - 4.2e-29 100.2 14.6 1.7e-10 40.9 1.6 5.1 1 1 4 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF109783 - 2.9e-28 97.0 8.6 2.1e-07 31.1 0.1 5.3 5 0 0 5 5 5 5 Ankyrin repeat Ank_3 PF13606.6 ORF109783 - 9.7e-24 80.9 0.7 0.00016 21.8 0.0 6.4 6 0 0 6 6 6 5 Ankyrin repeat ubiquitin PF00240.23 ORF109783 - 0.00078 19.1 0.0 0.0014 18.3 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF109783 - 0.022 14.6 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like PK_C PF02887.16 ORF109783 - 0.033 14.4 0.0 3.3 8.0 0.0 3.3 2 1 1 3 3 3 0 Pyruvate kinase, alpha/beta domain TauD PF02668.16 ORF106514 - 1.2e-20 74.4 0.2 1.7e-20 73.9 0.2 1.2 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family DUF2807 PF10988.8 ORF105339 - 0.022 14.6 0.3 0.072 12.9 0.3 1.9 1 1 0 1 1 1 0 Putative auto-transporter adhesin, head GIN domain Secretin PF00263.21 ORF102061 - 2e-45 154.5 0.2 2.7e-45 154.0 0.2 1.2 1 0 0 1 1 1 1 Bacterial type II and III secretion system protein Secretin_N PF03958.17 ORF102061 - 0.00028 21.2 0.1 0.0007 19.9 0.1 1.7 1 0 0 1 1 1 1 Bacterial type II/III secretion system short domain DUF1275 PF06912.11 ORF101255 - 1.3e-20 74.2 13.9 1.3e-20 74.2 13.9 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1275) DUF3206 PF11472.8 ORF101255 - 0.18 11.8 0.0 2.6 8.0 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3206) dDENN PF03455.19 NODE_26881_length_796_cov_3.513798_g21047_i0reverse_frame_1 - 2.3e-06 27.5 0.9 8.3e-06 25.7 0.6 2.1 2 0 0 2 2 2 1 dDENN domain RecG_N PF17190.4 NODE_26881_length_796_cov_3.513798_g21047_i0reverse_frame_1 - 4.7 8.0 14.5 0.06 14.1 3.5 2.9 2 1 2 4 4 4 0 RecG N-terminal helical domain NADH-G_4Fe-4S_3 PF10588.9 NODE_26869_length_796_cov_119.645204_g20836_i1reverse_frame_1 - 0.087 12.4 0.3 0.087 12.4 0.3 2.5 3 0 0 3 3 3 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FH2 PF02181.23 NODE_26859_length_796_cov_174.231275_g21027_i0forward_frame_1 - 3e-18 66.1 0.0 4.1e-18 65.6 0.0 1.1 1 0 0 1 1 1 1 Formin Homology 2 Domain FliT PF05400.13 NODE_26852_length_796_cov_346.197109_g21021_i0forward_frame_1 - 0.26 12.1 12.3 2.3 9.1 1.1 2.8 1 1 1 2 2 2 0 Flagellar protein FliT DASH_Spc19 PF08287.11 NODE_26852_length_796_cov_346.197109_g21021_i0forward_frame_1 - 0.94 9.4 27.8 3 7.7 12.1 2.4 1 1 1 2 2 2 0 Spc19 DUF2408 PF10303.9 NODE_26852_length_796_cov_346.197109_g21021_i0forward_frame_1 - 3 8.4 28.1 0.26 11.9 17.8 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) Chalcone_2 PF16035.5 NODE_26852_length_796_cov_346.197109_g21021_i0forward_frame_1 - 4.7 6.9 12.2 6.7 6.4 11.3 1.8 1 1 1 2 2 2 0 Chalcone isomerase like DUF3782 PF12644.7 NODE_26852_length_796_cov_346.197109_g21021_i0forward_frame_1 - 9.5 6.4 11.5 56 4.0 6.7 3.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3782) Phospholamban PF04272.14 NODE_26832_length_797_cov_5.961942_g21005_i0reverse_frame_1 - 5.8 6.5 9.4 23 4.5 9.4 2.1 1 0 0 1 1 1 0 Phospholamban Herpes_TAF50 PF03326.13 NODE_26774_length_798_cov_127.688073_g20958_i0forward_frame_1 - 0.014 14.1 1.1 0.019 13.6 1.1 1.1 1 0 0 1 1 1 0 Herpesvirus transcription activation factor (transactivator) SP_C-Propep PF08999.10 NODE_26774_length_798_cov_127.688073_g20958_i0forward_frame_1 - 0.015 15.1 0.3 0.029 14.2 0.3 1.4 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide PH_17 PF18012.1 NODE_26745_length_798_cov_8811.402359_g20934_i0forward_frame_1 - 0.12 12.1 0.5 5.1 6.9 0.2 2.5 2 0 0 2 2 2 0 PH domain DUF667 PF05018.13 NODE_26743_length_799_cov_2.462042_g20932_i0forward_frame_3 - 0.016 14.9 4.5 0.04 13.6 0.1 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF667) Sulfatase PF00884.23 NODE_26743_length_799_cov_2.462042_g20932_i0forward_frame_2 - 2.3e-21 76.5 0.3 2.8e-21 76.2 0.3 1.1 1 0 0 1 1 1 1 Sulfatase DUF3792 PF12670.7 NODE_26743_length_799_cov_2.462042_g20932_i0forward_frame_2 - 0.052 13.7 1.5 0.11 12.7 1.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) DUF2909 PF11137.8 NODE_26743_length_799_cov_2.462042_g20932_i0forward_frame_2 - 0.11 12.4 0.0 0.11 12.4 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2909) DUF3302 PF11742.8 NODE_26740_length_799_cov_3.011780_g20929_i0reverse_frame_3 - 1.2e-39 134.3 6.5 1.2e-39 134.3 6.5 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3302) Shisa PF13908.6 NODE_26740_length_799_cov_3.011780_g20929_i0reverse_frame_3 - 0.67 10.2 3.2 2.3 8.4 0.0 2.1 1 1 0 2 2 2 0 Wnt and FGF inhibitory regulator DUF3810 PF12725.7 NODE_26740_length_799_cov_3.011780_g20929_i0reverse_frame_3 - 5.1 6.4 6.9 0.37 10.1 0.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3810) ROKNT PF08067.11 NODE_26739_length_799_cov_16.239529_g20928_i0reverse_frame_2 - 0.18 12.1 2.9 0.23 11.8 0.1 2.5 2 0 0 2 2 2 0 ROKNT (NUC014) domain SF3A3 PF16837.5 NODE_26738_length_799_cov_18.989529_g20927_i0reverse_frame_2 - 0.085 13.4 0.6 0.2 12.2 0.6 1.7 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 KRTDAP PF15200.6 NODE_26736_length_799_cov_60.243455_g20925_i0reverse_frame_2 - 0.0051 16.6 0.7 0.019 14.7 0.1 2.2 3 0 0 3 3 3 1 Keratinocyte differentiation-associated Dicty_CAD PF05720.12 NODE_26734_length_799_cov_70.446335_g20923_i0forward_frame_3 - 1 9.4 4.8 0.46 10.5 1.4 2.1 1 1 1 2 2 2 0 Cell-cell adhesion domain YMF19 PF02326.15 NODE_26724_length_799_cov_148.369110_g19425_i1reverse_frame_2 - 0.082 13.7 2.5 0.27 12.0 2.5 2.0 1 1 0 1 1 1 0 Plant ATP synthase F0 DUF1741 PF08427.10 NODE_26698_length_800_cov_4.299346_g20893_i0reverse_frame_2 - 0.00065 19.4 0.8 0.00094 18.9 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1741) Abhydrolase_9_N PF15420.6 NODE_26698_length_800_cov_4.299346_g20893_i0forward_frame_3 - 0.022 14.8 6.6 0.6 10.1 0.3 3.0 2 1 1 3 3 3 0 Alpha/beta-hydrolase family N-terminus DUF4131 PF13567.6 NODE_26698_length_800_cov_4.299346_g20893_i0forward_frame_3 - 0.74 9.5 7.0 1.1 8.8 1.3 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) DUF5336 PF17270.2 NODE_26698_length_800_cov_4.299346_g20893_i0forward_frame_3 - 1.2 8.8 7.5 0.27 10.9 2.1 2.5 2 1 2 4 4 4 0 Family of unknown function (DUF5336) ATP_synt_H PF05493.13 NODE_26698_length_800_cov_4.299346_g20893_i0forward_frame_3 - 9.7 6.7 13.3 0.12 12.8 0.6 3.8 2 1 2 4 4 4 0 ATP synthase subunit H Tim17 PF02466.19 NODE_26682_length_800_cov_158.749020_g20877_i0reverse_frame_3 - 0.00042 20.7 0.1 0.00062 20.1 0.1 1.3 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family DUF3888 PF13027.6 NODE_26660_length_800_cov_5375.997386_g9198_i8forward_frame_3 - 0.0059 17.0 0.2 0.017 15.6 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3888) DUF3888 PF13027.6 NODE_26659_length_800_cov_5392.564706_g9198_i7forward_frame_3 - 0.006 17.0 0.2 0.017 15.6 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3888) z-alpha PF02295.17 NODE_26653_length_801_cov_4.065274_g20856_i0forward_frame_2 - 0.045 13.8 2.1 4.2 7.5 0.9 2.3 1 1 1 2 2 2 0 Adenosine deaminase z-alpha domain SDA1 PF05285.12 NODE_26604_length_801_cov_2161.035248_g20427_i3reverse_frame_3 - 2.5 7.5 11.9 2.9 7.2 11.9 1.2 1 0 0 1 1 1 0 SDA1 ORC6 PF05460.13 ORF9931 - 1.1 8.5 5.1 1.3 8.2 5.1 1.3 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Pep_deformylase PF01327.21 ORF97246 - 9e-29 100.1 0.0 1.2e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 Polypeptide deformylase DUF3385 PF11865.8 ORF91450 - 0.16 11.9 2.2 0.25 11.2 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) TPR_1 PF00515.28 ORF83133 - 1.2e-06 28.1 7.2 0.00057 19.6 0.0 3.7 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF83133 - 6e-06 26.0 0.0 0.0005 20.0 0.0 4.3 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF83133 - 0.00025 20.7 0.3 0.63 9.8 0.0 2.8 3 0 0 3 3 3 2 TPR repeat TPR_12 PF13424.6 ORF83133 - 0.00073 19.8 0.3 0.00073 19.8 0.3 3.4 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF83133 - 0.0092 16.1 4.8 0.0092 16.1 4.8 3.7 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF83133 - 0.012 16.4 0.3 0.012 16.4 0.3 5.0 3 1 2 5 5 5 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF83133 - 0.025 14.9 0.1 0.25 11.8 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat CPSase_L_D3 PF02787.19 ORF83133 - 0.1 12.9 0.0 0.15 12.4 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M20_dimer PF07687.14 ORF82256 - 1.6e-10 40.8 0.0 2.4e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 ORF82256 - 0.018 14.7 0.0 0.019 14.7 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M20/M25/M40 PPR PF01535.20 ORF81884 - 0.036 14.3 0.0 4.6 7.7 0.0 2.8 3 0 0 3 3 3 0 PPR repeat adh_short_C2 PF13561.6 ORF80321 - 2.6e-58 197.3 0.0 3.6e-58 196.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF80321 - 2.7e-51 173.8 0.0 3.3e-51 173.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF80321 - 5.5e-08 32.9 0.2 1.7e-07 31.3 0.2 1.7 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF80321 - 0.00015 21.3 0.1 0.0082 15.6 0.1 2.2 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF80321 - 0.0016 17.9 0.0 0.54 9.6 0.0 2.1 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase THF_DHG_CYH_C PF02882.19 ORF80321 - 0.01 15.2 0.0 0.025 13.9 0.0 1.8 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF1776 PF08643.10 ORF80321 - 0.084 12.2 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) E3_UbLigase_R4 PF13764.6 ORF76284 - 6.9e-34 117.1 1.4 8.1e-34 116.9 1.4 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 Lipoprotein_3 PF00938.17 ORF76284 - 0.063 13.5 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 Lipoprotein DHHA2 PF02833.14 ORF76284 - 0.16 12.2 1.1 0.24 11.6 1.1 1.3 1 0 0 1 1 1 0 DHHA2 domain E3_UbLigase_R4 PF13764.6 ORF71189 - 6.9e-34 117.1 1.4 8.1e-34 116.9 1.4 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 Lipoprotein_3 PF00938.17 ORF71189 - 0.063 13.5 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 Lipoprotein DHHA2 PF02833.14 ORF71189 - 0.16 12.2 1.1 0.24 11.6 1.1 1.3 1 0 0 1 1 1 0 DHHA2 domain PseudoU_synth_2 PF00849.22 ORF70860 - 3.9e-19 69.3 0.0 5.1e-19 68.9 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF4250 PF14056.6 ORF66065 - 0.23 11.4 4.4 0.72 9.9 0.2 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4250) DUF2730 PF10805.8 ORF66065 - 2.5 8.2 7.2 0.48 10.6 0.1 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF2730) DUF3659 PF12396.8 ORF64392 - 0.0002 21.2 22.7 0.11 12.4 0.8 4.3 2 2 1 3 3 3 3 Protein of unknown function (DUF3659) FliC PF12445.8 ORF64392 - 0.001 19.4 1.1 0.071 13.5 0.1 2.5 2 0 0 2 2 2 2 Flagellin protein CpxA_peri PF16527.5 ORF64392 - 0.3 11.5 3.1 5.3 7.4 0.0 2.9 3 0 0 3 3 3 0 Two-component sensor protein CpxA, periplasmic domain AAA PF00004.29 ORF6289 - 4.5e-41 140.4 0.0 7.3e-41 139.7 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF6289 - 5.9e-13 48.4 0.2 1.5e-12 47.1 0.2 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 ORF6289 - 2e-05 24.6 0.2 0.00012 22.1 0.2 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF6289 - 2.3e-05 24.8 0.2 0.0037 17.7 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 ORF6289 - 7.8e-05 23.0 0.2 0.023 15.0 0.0 2.4 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF6289 - 0.00022 21.4 0.0 0.001 19.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 ORF6289 - 0.00048 20.3 0.1 0.00076 19.7 0.1 1.7 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 ORF6289 - 0.0045 16.4 0.0 0.0089 15.4 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 ORF6289 - 0.0082 15.9 0.0 0.027 14.2 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain CPT PF07931.12 ORF6289 - 0.02 14.7 0.0 0.042 13.7 0.0 1.5 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF6289 - 0.026 14.0 0.0 0.053 13.0 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein IstB_IS21 PF01695.17 ORF6289 - 0.033 13.9 0.1 0.066 12.9 0.1 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein TIP49 PF06068.13 ORF6289 - 0.043 13.0 0.0 0.073 12.3 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain DUF815 PF05673.13 ORF6289 - 0.047 12.8 0.0 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_11 PF13086.6 ORF6289 - 0.052 13.3 0.2 0.099 12.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF6289 - 0.11 11.8 0.0 0.25 10.6 0.0 1.6 1 0 0 1 1 1 0 KaiC AAA_7 PF12775.7 ORF6289 - 0.19 11.2 0.0 0.78 9.2 0.0 1.9 1 1 0 1 1 1 0 P-loop containing dynein motor region M20_dimer PF07687.14 ORF62017 - 1.6e-10 40.8 0.0 2.4e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 ORF62017 - 0.018 14.7 0.0 0.019 14.7 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M20/M25/M40 Alba PF01918.21 ORF60964 - 1e-16 60.5 1.1 1.5e-16 59.9 1.1 1.3 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 ORF60964 - 0.064 13.2 0.1 0.099 12.6 0.1 1.3 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P DUF5320 PF17253.2 ORF60964 - 0.4 11.8 14.1 5.4 8.2 7.7 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Pkinase PF00069.25 ORF60961 - 7.1e-49 166.5 0.1 8.2e-49 166.3 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60961 - 1.1e-23 83.9 0.0 1.4e-23 83.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF60961 - 4e-07 29.6 0.0 5.3e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF60961 - 0.034 14.1 0.0 0.05 13.5 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pyr_redox_dim PF02852.22 ORF59262 - 5e-29 100.8 0.0 7.7e-29 100.2 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_2 PF07992.14 ORF59262 - 3.5e-25 88.9 0.0 5.4e-25 88.2 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF59262 - 2.9e-11 43.8 0.0 5.4e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF59262 - 0.00021 20.7 0.0 0.00026 20.3 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF59262 - 0.0021 16.8 0.0 0.0028 16.4 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein DAO PF01266.24 ORF59262 - 0.063 12.9 0.0 0.078 12.5 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase DUF3395 PF11875.8 ORF58624 - 8.2e-19 68.0 0.0 1.1e-18 67.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3395) DUF1966 PF09260.11 ORF58624 - 0.13 12.6 0.0 0.23 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1966) Fer4 PF00037.27 ORF54420 - 0.038 13.8 37.8 0.61 10.0 0.6 7.2 6 0 0 6 6 6 0 4Fe-4S binding domain Ribosomal_S24e PF01282.19 ORF54420 - 0.16 11.9 0.0 1.3e+02 2.6 0.0 3.1 3 0 0 3 3 3 0 Ribosomal protein S24e DUF3152 PF11350.8 ORF54420 - 0.17 11.5 13.6 6.3 6.4 0.5 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3152) E3_UbLigase_R4 PF13764.6 ORF53605 - 6.9e-34 117.1 1.4 8.1e-34 116.9 1.4 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 Lipoprotein_3 PF00938.17 ORF53605 - 0.063 13.5 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 Lipoprotein DHHA2 PF02833.14 ORF53605 - 0.16 12.2 1.1 0.24 11.6 1.1 1.3 1 0 0 1 1 1 0 DHHA2 domain TPR_1 PF00515.28 ORF48068 - 1.5e-15 56.2 11.2 0.00043 20.0 0.2 5.0 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF48068 - 3.5e-13 48.6 9.8 0.02 15.0 0.4 5.5 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.6 ORF48068 - 2.2e-12 47.1 11.7 8.8e-07 29.1 1.2 4.8 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF48068 - 1.1e-11 44.2 9.6 0.011 15.5 0.0 5.1 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_8 PF13181.6 ORF48068 - 2.7e-10 39.6 6.2 0.0016 18.5 0.1 5.4 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF48068 - 8.9e-07 28.5 6.2 0.49 10.5 0.0 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF48068 - 2e-05 25.0 6.4 3.5 8.7 0.1 4.9 5 1 0 5 5 4 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF48068 - 0.00059 19.3 2.7 0.00059 19.3 2.7 2.2 2 1 0 2 2 2 1 MalT-like TPR region SPO22 PF08631.10 ORF48068 - 0.00079 19.0 2.4 0.0012 18.3 0.6 2.0 2 0 0 2 2 2 1 Meiosis protein SPO22/ZIP4 like DUF5113 PF17140.4 ORF48068 - 0.003 17.4 0.0 3.3 7.5 0.0 3.2 3 0 0 3 3 3 1 Domain of unknown function (DUF5113) MIT PF04212.18 ORF48068 - 0.0036 17.3 2.8 0.43 10.7 0.1 3.8 4 1 0 4 4 4 1 MIT (microtubule interacting and transport) domain TPR_17 PF13431.6 ORF48068 - 0.0079 16.5 2.5 0.89 10.1 0.0 4.1 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF48068 - 0.0086 16.6 2.1 0.94 10.3 0.1 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat GATase_5 PF13507.6 ORF48068 - 0.01 14.9 0.0 0.036 13.2 0.0 1.7 1 1 1 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain DUF2379 PF09543.10 ORF48068 - 0.016 15.4 2.4 0.054 13.7 0.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2379) TPR_6 PF13174.6 ORF48068 - 0.082 13.6 5.2 23 5.9 0.0 4.9 4 1 0 4 4 4 0 Tetratricopeptide repeat PPR PF01535.20 ORF48068 - 0.1 12.9 0.4 6.7 7.2 0.0 3.7 4 0 0 4 4 4 0 PPR repeat SKA2 PF16740.5 ORF48068 - 0.34 10.7 3.7 0.32 10.8 0.5 2.5 3 0 0 3 3 3 0 Spindle and kinetochore-associated protein 2 SMBP PF16785.5 ORF48068 - 0.41 10.9 7.2 0.13 12.5 1.7 2.6 3 1 0 3 3 2 0 Small metal-binding protein TPR_19 PF14559.6 ORF48068 - 0.63 10.6 8.7 7.5 7.1 2.7 3.8 4 1 0 4 4 3 0 Tetratricopeptide repeat FUSC PF04632.12 ORF48068 - 1.7 7.1 4.1 11 4.4 0.9 2.1 2 0 0 2 2 2 0 Fusaric acid resistance protein family Glycos_transf_2 PF00535.26 ORF43042 - 1.4e-18 67.3 0.0 1.9e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF43042 - 4.5e-05 23.4 0.1 0.00011 22.2 0.1 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 DUF3325 PF11804.8 ORF43042 - 0.032 14.4 1.7 0.059 13.5 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) FAP206 PF12018.8 ORF40581 - 0.00015 21.3 0.1 0.0063 16.1 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function YHS PF04945.13 ORF40581 - 0.02 15.0 0.6 1.1 9.4 0.1 2.8 2 0 0 2 2 2 0 YHS domain Pyr_redox_dim PF02852.22 ORF384 - 4.8e-29 100.8 0.0 7.7e-29 100.2 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_2 PF07992.14 ORF384 - 1.4e-23 83.6 0.0 2.2e-23 82.9 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF384 - 3e-11 43.7 0.0 5.4e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF384 - 0.00028 20.2 0.0 0.00036 19.9 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF384 - 0.0024 16.6 0.0 0.0034 16.2 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein SNARE PF05739.19 ORF37779 - 5.5e-13 48.7 0.5 6.8e-12 45.2 0.2 2.5 2 0 0 2 2 2 1 SNARE domain Synaptobrevin PF00957.21 ORF37779 - 0.00019 21.1 0.4 0.00019 21.1 0.4 2.4 3 1 0 3 3 3 1 Synaptobrevin ASL_C PF08328.11 ORF37779 - 0.0046 17.1 1.9 0.0046 17.1 1.9 2.2 2 1 0 2 2 2 1 Adenylosuccinate lyase C-terminal DUF1380 PF07128.12 ORF37779 - 0.04 14.1 0.4 0.15 12.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1380) HSBP1 PF06825.12 ORF37779 - 0.042 13.7 2.8 0.069 13.0 0.5 2.5 2 0 0 2 2 2 0 Heat shock factor binding protein 1 Phe_tRNA-synt_N PF02912.18 ORF37779 - 0.042 13.8 0.6 0.042 13.8 0.6 2.7 3 1 0 3 3 3 0 Aminoacyl tRNA synthetase class II, N-terminal domain Sec20 PF03908.13 ORF37779 - 0.052 13.5 6.0 3.5 7.6 0.1 2.9 2 1 0 2 2 2 0 Sec20 Spectrin PF00435.21 ORF37779 - 0.22 12.0 12.0 0.89 10.1 0.4 3.7 1 1 1 2 2 2 0 Spectrin repeat DUF2207 PF09972.9 ORF37779 - 0.22 10.2 9.6 0.012 14.4 0.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) Orf78 PF06024.12 ORF37779 - 0.29 11.4 0.1 0.29 11.4 0.1 2.8 2 1 0 3 3 3 0 Orf78 (ac78) DUF768 PF05589.11 ORF37779 - 0.67 10.0 3.3 1.7 8.7 1.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF768) RNA_pol_Rbc25 PF08292.12 ORF37779 - 0.69 10.2 5.3 16 5.7 3.9 2.3 2 0 0 2 2 2 0 RNA polymerase III subunit Rpc25 NPV_P10 PF05531.12 ORF37779 - 0.71 10.4 13.6 0.23 12.0 4.2 3.2 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Pex24p PF06398.11 ORF37779 - 0.82 8.6 6.2 0.19 10.6 0.4 2.3 1 1 2 3 3 3 0 Integral peroxisomal membrane peroxin DUF2433 PF10360.9 ORF37779 - 1 9.4 10.9 3 8.0 8.3 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2433) RPW8 PF05659.11 ORF37779 - 1.9 8.2 10.8 1.8 8.2 5.0 2.4 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 YtxH PF12732.7 ORF37779 - 2 9.0 8.9 9.5e+02 0.4 8.9 3.4 1 1 0 1 1 1 0 YtxH-like protein DUF2205 PF10224.9 ORF37779 - 2.2 8.3 10.7 0.32 11.0 2.7 3.1 3 1 0 3 3 3 0 Short coiled-coil protein Spore_III_AB PF09548.10 ORF37779 - 2.8 8.0 10.9 6.2 6.9 0.2 2.8 2 1 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) DUF4199 PF13858.6 ORF37779 - 3 8.2 4.7 8.5 6.7 0.0 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) DUF155 PF02582.14 ORF37779 - 6.3 6.9 12.3 3.8 7.6 6.4 2.3 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 MutS_III PF05192.18 ORF37779 - 6.7 6.9 14.3 12 6.1 14.3 1.4 1 1 0 1 1 1 0 MutS domain III ETRAMP PF09716.10 ORF37779 - 7 6.8 9.9 60 3.8 9.9 2.6 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Asp PF00026.23 ORF37613 - 3.8e-24 85.7 3.8 4.8e-24 85.3 3.8 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF37613 - 1.2e-06 28.9 0.7 3.2e-06 27.5 0.2 1.8 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal PP2C PF00481.21 ORF36538 - 1.1e-41 143.1 0.1 1.4e-41 142.8 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF36538 - 0.00041 20.0 2.3 0.0019 17.9 1.0 2.4 1 1 1 2 2 2 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF36538 - 0.0024 17.8 0.1 0.0043 17.0 0.1 1.8 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) AAA PF00004.29 ORF35530 - 4.5e-41 140.4 0.0 7.3e-41 139.7 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF35530 - 5.9e-13 48.4 0.2 1.5e-12 47.1 0.2 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 ORF35530 - 2e-05 24.6 0.2 0.00012 22.1 0.2 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF35530 - 2.3e-05 24.8 0.2 0.0037 17.7 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 ORF35530 - 7.8e-05 23.0 0.2 0.023 15.0 0.0 2.4 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF35530 - 0.00022 21.4 0.0 0.001 19.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 ORF35530 - 0.00048 20.3 0.1 0.00076 19.7 0.1 1.7 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 ORF35530 - 0.0045 16.4 0.0 0.0089 15.4 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 ORF35530 - 0.0082 15.9 0.0 0.027 14.2 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain CPT PF07931.12 ORF35530 - 0.02 14.7 0.0 0.042 13.7 0.0 1.5 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF35530 - 0.026 14.0 0.0 0.053 13.0 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein IstB_IS21 PF01695.17 ORF35530 - 0.033 13.9 0.1 0.066 12.9 0.1 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein TIP49 PF06068.13 ORF35530 - 0.043 13.0 0.0 0.073 12.3 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain DUF815 PF05673.13 ORF35530 - 0.047 12.8 0.0 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_11 PF13086.6 ORF35530 - 0.052 13.3 0.2 0.099 12.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF35530 - 0.11 11.8 0.0 0.25 10.6 0.0 1.6 1 0 0 1 1 1 0 KaiC AAA_7 PF12775.7 ORF35530 - 0.19 11.2 0.0 0.78 9.2 0.0 1.9 1 1 0 1 1 1 0 P-loop containing dynein motor region Act-Frag_cataly PF09192.10 ORF34951 - 3.2e-09 36.6 0.2 5.4e-09 35.8 0.2 1.5 1 1 0 1 1 1 1 Actin-fragmin kinase, catalytic Virul_fac_BrkB PF03631.15 ORF34951 - 0.15 11.6 0.0 0.91 9.1 0.0 1.9 2 0 0 2 2 2 0 Virulence factor BrkB zf-C2H2_6 PF13912.6 ORF28884 - 2.9e-06 27.1 2.1 8.7e-06 25.6 2.1 1.9 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_4 PF13894.6 ORF28884 - 0.00036 21.1 2.3 0.0011 19.6 1.5 2.3 2 0 0 2 2 2 1 C2H2-type zinc finger zf-Di19 PF05605.12 ORF28884 - 0.0036 17.6 0.6 0.011 16.0 0.6 1.9 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding CpXC PF14353.6 ORF28884 - 0.0099 15.9 0.8 0.02 14.9 0.2 1.9 2 0 0 2 2 2 1 CpXC protein RTP1_C2 PF10304.9 ORF28884 - 0.042 13.6 0.2 0.077 12.7 0.2 1.5 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 2 AT_hook PF02178.19 ORF28884 - 0.055 13.3 1.2 0.16 12.0 1.2 1.8 1 0 0 1 1 1 0 AT hook motif zf-H2C2_2 PF13465.6 ORF28884 - 0.25 11.8 0.3 0.25 11.8 0.3 3.1 3 0 0 3 3 3 0 Zinc-finger double domain zf-C2H2 PF00096.26 ORF28884 - 0.31 11.6 1.8 1.2 9.7 1.8 2.1 1 0 0 1 1 1 0 Zinc finger, C2H2 type Presenilin PF01080.17 ORF28884 - 8.7 5.0 7.9 10 4.7 7.9 1.1 1 0 0 1 1 1 0 Presenilin AGH PF17558.2 ORF2505 - 0.0059 16.8 0.3 0.017 15.3 0.0 1.9 2 0 0 2 2 2 1 Androgenic gland hormone His_Phos_1 PF00300.22 ORF20305 - 7.8e-07 29.0 0.0 0.0025 17.5 0.0 2.9 2 1 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) V-SNARE PF05008.15 ORF20305 - 0.022 15.1 0.1 0.07 13.5 0.1 1.9 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus DNTTIP1_dimer PF18192.1 ORF19806 - 0.83 10.0 10.8 1.6 9.1 8.1 2.6 2 1 1 3 3 3 0 DNTTIP1 dimerisation domain 2OG-FeII_Oxy_3 PF13640.6 ORF15036 - 2.8e-11 44.2 0.0 4.5e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF15036 - 3.1e-06 27.8 0.0 8.2e-06 26.4 0.0 1.7 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily DJ-1_PfpI PF01965.24 ORF12945 - 8e-17 61.5 1.0 1.9e-16 60.3 1.0 1.6 1 1 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 ORF12945 - 1.2e-07 31.6 0.2 1.2e-05 25.2 0.2 2.3 1 1 0 1 1 1 1 ThiJ/PfpI family-like UDPG_MGDP_dh_C PF03720.15 ORF12945 - 0.022 15.2 0.1 4.5 7.7 0.0 2.3 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Uteroglobin PF01099.17 ORF12945 - 0.064 13.6 0.3 0.15 12.4 0.3 1.6 1 0 0 1 1 1 0 Uteroglobin family adh_short PF00106.25 ORF12941 - 1.9e-15 56.8 0.0 1.1e-13 51.2 0.0 2.0 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF12941 - 5.2e-10 39.3 0.1 8.1e-10 38.7 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF412 PF04217.13 ORF12511 - 0.11 12.4 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF412 YbgS PF13985.6 ORF12511 - 1.5 9.1 8.3 2.7 8.3 8.3 1.4 1 0 0 1 1 1 0 YbgS-like protein Gemini_V2 PF01524.17 ORF11845 - 0.047 13.9 0.1 1.4 9.2 0.0 2.5 2 0 0 2 2 2 0 Geminivirus V2 protein DNTTIP1_dimer PF18192.1 ORF11845 - 0.89 9.9 10.8 1.6 9.1 8.1 2.6 2 1 1 3 3 3 0 DNTTIP1 dimerisation domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks64.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks64.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks64.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks64.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TspO_MBR PF03073.15 ORF11547 - 9.6e-16 58.1 6.9 9.6e-16 58.1 6.9 1.9 2 0 0 2 2 2 1 TspO/MBR family BMC PF00936.19 ORF11547 - 0.11 12.6 0.1 0.2 11.7 0.1 1.4 1 0 0 1 1 1 0 BMC domain DUF3043 PF11241.8 ORF11547 - 0.21 11.6 0.9 0.34 10.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3043) PG_binding_1 PF01471.18 ORF112241 - 7.3e-09 35.7 0.0 1.3e-08 34.9 0.0 1.5 1 0 0 1 1 1 1 Putative peptidoglycan binding domain KfrA_N PF11740.8 ORF111491 - 0.46 11.2 11.0 0.99 10.1 11.0 1.5 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term Asp PF00026.23 ORF109986 - 1.8e-15 57.2 0.3 2.2e-15 56.9 0.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF109986 - 0.046 13.5 0.0 0.072 12.9 0.0 1.4 1 1 0 1 1 1 0 Xylanase inhibitor C-terminal Orf78 PF06024.12 ORF109986 - 0.19 12.0 0.0 0.33 11.3 0.0 1.4 1 0 0 1 1 1 0 Orf78 (ac78) HATPase_c PF02518.26 ORF109531 - 2e-22 79.8 0.1 3.3e-22 79.1 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EF-hand_2 PF09068.11 ORF109531 - 0.0017 18.5 0.9 0.0033 17.6 0.9 1.5 1 0 0 1 1 1 1 EF hand HATPase_c_3 PF13589.6 ORF109531 - 0.015 15.1 0.0 0.023 14.5 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KfrA_N PF11740.8 ORF109348 - 0.46 11.2 11.0 0.99 10.1 11.0 1.5 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term TSC22 PF01166.18 ORF108999 - 0.056 13.8 2.0 0.37 11.1 1.1 2.5 2 0 0 2 2 2 0 TSC-22/dip/bun family GAT PF03127.14 ORF108999 - 0.31 11.4 4.1 4.3 7.7 0.4 2.9 2 1 1 3 3 3 0 GAT domain FtsX_ECD PF18075.1 ORF108999 - 0.51 11.0 4.0 1.4 9.6 0.2 2.7 2 1 1 3 3 3 0 FtsX extracellular domain T7SS_ESX_EspC PF10824.8 ORF108999 - 1.6 9.2 13.2 15 6.2 0.8 4.1 2 1 1 4 4 4 0 Excreted virulence factor EspC, type VII ESX diderm Spc7 PF08317.11 ORF108999 - 2.1 7.1 10.4 0.18 10.7 3.8 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein YabA PF06156.13 ORF108999 - 3.5 8.3 5.2 1.6 9.4 1.8 2.1 2 0 0 2 2 2 0 Initiation control protein YabA EAL PF00563.20 ORF105916 - 1.2e-68 231.2 0.0 1.5e-68 230.9 0.0 1.0 1 0 0 1 1 1 1 EAL domain Asparaginase PF00710.20 ORF1057 - 1.5e-48 164.9 1.2 1.6e-48 164.8 0.3 1.5 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 ORF1057 - 2e-27 95.7 0.4 1.6e-26 92.8 0.1 2.1 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain UQ_con PF00179.26 NODE_26991_length_793_cov_466.402375_g18755_i1reverse_frame_1 - 8.1e-06 25.5 0.0 1.6e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Jacalin PF01419.17 NODE_26950_length_794_cov_285.317523_g7054_i2reverse_frame_1 - 1.8e-10 40.8 0.9 2.1e-06 27.7 0.2 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain MORN PF02493.20 NODE_26924_length_795_cov_77.225000_g21080_i0reverse_frame_1 - 1.9e-06 27.4 6.1 0.0002 21.0 0.2 3.4 3 0 0 3 3 3 2 MORN repeat Methyltr_RsmB-F PF01189.17 NODE_26921_length_795_cov_91.756579_g21077_i0forward_frame_1 - 3.1e-14 53.1 0.0 2.3e-12 47.0 0.0 2.6 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F SPG48 PF14764.6 NODE_26881_length_796_cov_3.513798_g21047_i0reverse_frame_2 - 0.00072 20.0 0.8 0.0015 19.0 0.8 1.5 1 0 0 1 1 1 1 AP-5 complex subunit, vesicle trafficking Fib_alpha PF08702.10 NODE_26881_length_796_cov_3.513798_g21047_i0reverse_frame_2 - 0.0032 17.7 4.5 0.0032 17.7 4.5 2.0 2 0 0 2 2 2 1 Fibrinogen alpha/beta chain family MG4 PF17789.1 NODE_26876_length_796_cov_73.082786_g21042_i0forward_frame_2 - 0.013 15.6 1.6 0.18 11.9 0.2 2.7 1 1 1 2 2 2 0 Macroglobulin domain MG4 Big_1 PF02369.16 NODE_26876_length_796_cov_73.082786_g21042_i0forward_frame_2 - 0.073 13.1 0.2 4.5 7.4 0.0 2.5 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 1) DUF3958 PF13125.6 NODE_26872_length_796_cov_92.935611_g21038_i0forward_frame_2 - 0.00081 19.6 1.6 0.00081 19.6 1.6 2.7 2 1 1 3 3 3 1 Protein of unknown function (DUF3958) Apolipoprotein PF01442.18 NODE_26872_length_796_cov_92.935611_g21038_i0forward_frame_2 - 0.0036 17.2 1.1 0.0056 16.6 1.1 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain RXLR_WY PF18634.1 NODE_26872_length_796_cov_92.935611_g21038_i0forward_frame_2 - 0.014 15.3 0.5 3.5 7.6 0.0 2.5 2 0 0 2 2 2 0 RXLR phytopathogen effector protein WY-domain HrpB7 PF09486.10 NODE_26872_length_796_cov_92.935611_g21038_i0forward_frame_2 - 0.056 13.8 1.7 0.08 13.3 1.7 1.2 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) Fez1 PF06818.15 NODE_26872_length_796_cov_92.935611_g21038_i0forward_frame_2 - 1.1 9.6 17.7 0.95 9.9 13.6 2.3 2 1 0 2 2 2 0 Fez1 YtxH PF12732.7 NODE_26872_length_796_cov_92.935611_g21038_i0forward_frame_2 - 3.6 8.2 6.9 0.28 11.7 0.6 2.3 2 1 1 3 3 3 0 YtxH-like protein SNX17_FERM_C PF18116.1 NODE_26852_length_796_cov_346.197109_g21021_i0forward_frame_2 - 0.015 15.3 1.8 0.015 15.3 1.8 2.2 1 1 1 2 2 2 0 Sorting Nexin 17 FERM C-terminal domain CALM_bind PF16025.5 NODE_26847_length_796_cov_703.423127_g21017_i0reverse_frame_3 - 0.14 12.6 1.1 0.27 11.7 1.1 1.4 1 0 0 1 1 1 0 Calcium-dependent calmodulin binding Rdx PF10262.9 NODE_26840_length_796_cov_9398.503285_g21013_i0forward_frame_3 - 7.8e-07 29.2 0.0 1.6e-06 28.2 0.0 1.5 1 0 0 1 1 1 1 Rdx family PapC_C PF13953.6 NODE_26837_length_797_cov_2.917323_g21010_i0forward_frame_3 - 4.5e-17 61.6 0.0 7.8e-17 60.8 0.0 1.4 1 0 0 1 1 1 1 PapC C-terminal domain RTBV_P12 PF06361.11 NODE_26837_length_797_cov_2.917323_g21010_i0forward_frame_2 - 0.21 12.0 0.0 0.32 11.4 0.0 1.3 1 0 0 1 1 1 0 Rice tungro bacilliform virus P12 protein Yeast-kill-tox PF09207.11 NODE_26837_length_797_cov_2.917323_g21010_i0forward_frame_2 - 0.21 12.2 3.2 14 6.4 0.5 2.3 2 0 0 2 2 2 0 Yeast killer toxin adh_short_C2 PF13561.6 NODE_26818_length_797_cov_172.599738_g20995_i0reverse_frame_3 - 0.0017 18.0 0.0 0.0023 17.5 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase UDPG_MGDP_dh_C PF03720.15 NODE_26818_length_797_cov_172.599738_g20995_i0reverse_frame_3 - 0.012 16.0 0.2 0.023 15.1 0.2 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain adh_short PF00106.25 NODE_26818_length_797_cov_172.599738_g20995_i0reverse_frame_3 - 0.15 11.5 0.2 0.43 10.0 0.2 1.7 1 1 0 1 1 1 0 short chain dehydrogenase Toxin_35 PF10530.9 NODE_26818_length_797_cov_172.599738_g20995_i0reverse_frame_2 - 0.023 14.7 4.0 0.59 10.2 0.0 2.6 2 0 0 2 2 2 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold NADHdh PF00146.21 NODE_26818_length_797_cov_172.599738_g20995_i0forward_frame_2 - 0.0071 15.7 2.7 0.0098 15.2 2.7 1.2 1 0 0 1 1 1 1 NADH dehydrogenase Cnd2 PF05786.14 NODE_26799_length_797_cov_2172.388451_g20427_i4reverse_frame_3 - 1.6 7.3 14.0 2.2 6.8 14.0 1.2 1 0 0 1 1 1 0 Condensin complex subunit 2 DUF228 PF02989.14 NODE_26785_length_798_cov_69.129751_g20968_i0reverse_frame_3 - 0.058 13.2 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Lyme disease proteins of unknown function RCC1_2 PF13540.6 NODE_26764_length_798_cov_269.307995_g20951_i0forward_frame_3 - 5.4e-09 35.6 19.9 0.62 9.9 0.2 6.8 7 0 0 7 7 7 5 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_26764_length_798_cov_269.307995_g20951_i0forward_frame_3 - 0.0029 18.1 0.0 61 4.2 0.0 4.6 5 0 0 5 5 5 0 Spectrin repeat Plug_translocon PF10559.9 NODE_26764_length_798_cov_269.307995_g20951_i0forward_frame_3 - 0.0079 16.0 1.3 5.3 7.0 0.1 3.7 3 0 0 3 3 3 1 Plug domain of Sec61p PH_TFIIH PF08567.11 NODE_26764_length_798_cov_269.307995_g20951_i0forward_frame_3 - 0.02 15.2 2.5 12 6.3 0.0 4.5 2 2 4 6 6 6 0 TFIIH p62 subunit, N-terminal domain GTP_EFTU_D4 PF14578.6 NODE_26764_length_798_cov_269.307995_g20951_i0forward_frame_3 - 0.23 11.4 0.9 17 5.4 0.0 3.3 3 0 0 3 3 3 0 Elongation factor Tu domain 4 GW PF13457.6 NODE_26764_length_798_cov_269.307995_g20951_i0forward_frame_3 - 0.35 11.5 1.7 38 5.0 0.0 3.3 3 1 0 3 3 3 0 GW (Gly-Tryp) dipeptide domain Synaptobrevin PF00957.21 NODE_26745_length_798_cov_8811.402359_g20934_i0reverse_frame_3 - 6.9e-12 45.0 1.5 1.4e-11 44.0 1.5 1.6 1 0 0 1 1 1 1 Synaptobrevin DUF2207 PF09972.9 NODE_26745_length_798_cov_8811.402359_g20934_i0reverse_frame_3 - 0.014 14.2 3.1 0.019 13.7 3.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Orf78 PF06024.12 NODE_26745_length_798_cov_8811.402359_g20934_i0reverse_frame_3 - 0.026 14.8 0.4 0.056 13.8 0.4 1.6 1 0 0 1 1 1 0 Orf78 (ac78) Herpes_US9 PF06072.11 NODE_26745_length_798_cov_8811.402359_g20934_i0reverse_frame_3 - 0.032 14.1 0.6 0.032 14.1 0.6 2.0 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 Renin_r PF07850.14 NODE_26745_length_798_cov_8811.402359_g20934_i0reverse_frame_3 - 0.046 14.3 0.2 0.11 13.1 0.2 1.7 1 0 0 1 1 1 0 Renin receptor-like protein Wzy_C PF04932.15 NODE_26745_length_798_cov_8811.402359_g20934_i0reverse_frame_3 - 5.6 6.6 6.2 7.6 6.1 6.2 1.6 1 1 0 1 1 1 0 O-Antigen ligase Pkinase PF00069.25 ORF95108 - 1.6e-57 194.9 0.0 1.9e-57 194.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95108 - 2.7e-28 99.0 0.0 3.4e-28 98.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF95108 - 0.00019 20.9 0.0 0.00027 20.3 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_C PF00433.24 ORF95108 - 0.066 13.9 1.2 0.25 12.1 1.8 1.7 2 0 0 2 2 2 0 Protein kinase C terminal domain KH_1 PF00013.29 ORF93486 - 1.4e-06 28.1 0.0 0.00013 21.8 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF93486 - 0.037 13.9 0.0 0.83 9.5 0.0 2.3 2 0 0 2 2 2 0 KH domain Hepatitis_core PF00906.20 ORF93486 - 5.3 6.5 8.6 7.6 6.0 8.6 1.3 1 0 0 1 1 1 0 Hepatitis core antigen EF-hand_7 PF13499.6 ORF92663 - 0.00019 21.8 0.0 0.55 10.7 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF92663 - 0.047 13.6 0.0 0.36 10.9 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain Tiam_CC_Ex PF18385.1 ORF89574 - 0.093 13.1 0.0 9.4 6.7 0.0 2.4 1 1 1 2 2 2 0 T-lymphoma invasion and metastasis CC-Ex domain AATF-Che1 PF13339.6 ORF89574 - 0.22 12.2 1.8 0.25 12.0 0.9 1.6 2 0 0 2 2 2 0 Apoptosis antagonizing transcription factor ABC2_membrane_3 PF12698.7 ORF89574 - 0.29 10.2 0.9 0.35 9.9 0.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein PHD PF00628.29 ORF89574 - 0.49 10.3 6.9 0.97 9.4 6.9 1.5 1 0 0 1 1 1 0 PHD-finger zf-CCCH PF00642.24 ORF87754 - 2.5e-14 52.7 6.8 8.8e-07 28.7 0.8 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF87754 - 2.5e-08 33.7 15.1 2.1e-05 24.4 4.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF87754 - 4.6e-05 23.1 10.2 9.6e-05 22.1 2.7 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF87754 - 5.1e-05 23.9 5.7 9.6e-05 23.0 0.5 2.4 1 1 1 2 2 2 1 Torus domain zf-CCCH_2 PF14608.6 ORF87754 - 0.041 14.4 7.8 1.7 9.2 3.0 2.4 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Rsa3 PF14615.6 ORF87754 - 0.06 12.9 0.0 0.18 11.4 0.0 1.8 2 0 0 2 2 2 0 Ribosome-assembly protein 3 TatD_DNase PF01026.21 ORF85511 - 5e-77 258.7 0.0 5.6e-77 258.6 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase DeoRC PF00455.22 ORF85458 - 3.3e-51 173.4 0.5 5.9e-51 172.6 0.5 1.4 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 ORF85458 - 1e-16 60.4 0.4 2.5e-16 59.2 0.4 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 ORF85458 - 1.4e-09 37.7 0.2 3.3e-09 36.6 0.2 1.6 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 ORF85458 - 5.3e-05 22.8 1.4 7.7e-05 22.3 0.3 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 ORF85458 - 0.00068 19.5 0.1 0.0021 17.9 0.1 1.8 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 ORF85458 - 0.00086 18.8 0.2 0.0047 16.5 0.2 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 ORF85458 - 0.0018 18.6 0.1 0.0038 17.6 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 ORF85458 - 0.0028 17.8 0.2 0.006 16.8 0.2 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 ORF85458 - 0.0051 16.7 0.1 0.015 15.2 0.1 1.8 1 0 0 1 1 1 1 MarR family HTH_28 PF13518.6 ORF85458 - 0.01 16.0 0.0 0.024 14.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_6 PF01418.17 ORF85458 - 0.012 15.6 0.0 2.4 8.2 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family E3_UFM1_ligase PF09743.9 ORF85458 - 0.012 15.2 0.3 0.099 12.2 0.1 2.0 2 0 0 2 2 2 0 E3 UFM1-protein ligase 1 HTH_23 PF13384.6 ORF85458 - 0.013 15.3 0.1 0.034 13.9 0.1 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_20 PF12840.7 ORF85458 - 0.013 15.5 2.1 0.034 14.2 0.1 2.5 3 0 0 3 3 2 0 Helix-turn-helix domain DDRGK PF09756.9 ORF85458 - 0.027 14.1 0.1 0.039 13.5 0.1 1.2 1 0 0 1 1 1 0 DDRGK domain Put_DNA-bind_N PF06971.13 ORF85458 - 0.034 14.2 0.1 0.071 13.1 0.1 1.5 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus RraA-like PF03737.15 ORF85458 - 0.042 14.0 1.3 2.9 8.1 0.2 3.3 1 1 0 2 2 2 0 Aldolase/RraA HTH_38 PF13936.6 ORF85458 - 0.061 13.1 0.2 0.18 11.6 0.2 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Ribosomal_S25 PF03297.15 ORF85458 - 0.062 13.5 0.2 0.13 12.5 0.2 1.6 1 0 0 1 1 1 0 S25 ribosomal protein HTH_5 PF01022.20 ORF85458 - 0.068 13.0 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_36 PF13730.6 ORF85458 - 0.081 12.9 0.0 0.34 10.9 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain FeoC PF09012.10 ORF85458 - 0.16 12.1 0.1 1.1 9.4 0.1 2.2 2 0 0 2 2 2 0 FeoC like transcriptional regulator Amidase PF01425.21 ORF8327 - 1.2e-39 136.6 0.0 1.8e-39 136.0 0.0 1.3 1 0 0 1 1 1 1 Amidase 3-HAO PF06052.12 ORF82780 - 8.2e-42 142.4 0.0 5.4e-37 126.7 0.0 2.1 2 0 0 2 2 2 2 3-hydroxyanthranilic acid dioxygenase Cupin_2 PF07883.11 ORF82780 - 1.7e-08 34.0 0.0 0.009 15.7 0.0 2.9 2 1 1 3 3 3 2 Cupin domain AraC_binding PF02311.19 ORF82780 - 0.0023 17.9 0.0 0.099 12.6 0.0 2.2 2 0 0 2 2 2 1 AraC-like ligand binding domain AraC_binding_2 PF14525.6 ORF82780 - 0.0024 17.6 0.0 0.0039 16.9 0.0 1.3 1 0 0 1 1 1 1 AraC-binding-like domain Cupin_6 PF12852.7 ORF82780 - 0.11 12.2 0.0 2.6 7.7 0.0 2.2 2 0 0 2 2 2 0 Cupin DUF2071 PF09844.9 ORF81942 - 2.5e-07 30.6 0.0 3.3e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (COG2071) DUF229 PF02995.17 ORF81203 - 1.5e-06 27.2 5.0 6e-06 25.1 4.8 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF229) DUF489 PF04356.12 ORF81203 - 0.094 12.7 0.2 0.15 12.1 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) GAF PF01590.26 ORF80718 - 2e-10 41.4 0.0 6e-06 26.9 0.0 2.1 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 ORF80718 - 9.5e-08 32.4 0.0 0.00054 20.3 0.0 2.2 2 0 0 2 2 2 2 GAF domain GAF_3 PF13492.6 ORF80718 - 0.0008 19.8 0.0 0.59 10.5 0.0 2.4 2 1 0 2 2 2 2 GAF domain DUF2250 PF10007.9 ORF80718 - 0.75 9.9 4.9 0.98 9.6 0.5 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) LAGLIDADG_1 PF00961.19 ORF80718 - 1.6 9.8 5.6 2.5 9.1 0.6 2.5 2 0 0 2 2 2 0 LAGLIDADG endonuclease zf-CCCH PF00642.24 ORF78738 - 2.5e-14 52.7 6.8 8.8e-07 28.7 0.8 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF78738 - 2.5e-08 33.7 15.1 2.1e-05 24.4 4.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF78738 - 4.6e-05 23.1 10.2 9.6e-05 22.1 2.7 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF78738 - 5.1e-05 23.9 5.7 9.6e-05 23.0 0.5 2.4 1 1 1 2 2 2 1 Torus domain zf-CCCH_2 PF14608.6 ORF78738 - 0.041 14.4 7.8 1.7 9.2 3.0 2.4 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Rsa3 PF14615.6 ORF78738 - 0.06 12.9 0.0 0.18 11.4 0.0 1.8 2 0 0 2 2 2 0 Ribosome-assembly protein 3 COX8 PF02285.15 ORF77127 - 0.11 12.4 0.6 0.2 11.6 0.6 1.4 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII Herpes_LMP2 PF07415.11 ORF77127 - 1.6 7.5 5.0 2.3 6.9 5.0 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein zf-RING_2 PF13639.6 ORF76224 - 1.9e-07 31.3 5.7 3.7e-07 30.4 5.7 1.5 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 ORF76224 - 3.5e-05 23.8 0.7 6.5e-05 22.9 0.7 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF76224 - 8.2e-05 22.5 4.4 8.2e-05 22.5 4.4 2.0 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF76224 - 0.00031 20.5 6.1 0.00083 19.2 6.1 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF76224 - 0.00044 19.9 4.9 0.001 18.8 4.9 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF76224 - 0.0007 19.5 4.9 0.0018 18.2 4.9 1.8 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF76224 - 0.00099 18.7 0.9 0.0018 17.8 0.9 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 ORF76224 - 0.0018 18.1 8.1 0.0037 17.1 7.4 2.0 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF76224 - 0.0049 17.1 4.7 0.019 15.3 4.7 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain Zf_RING PF16744.5 ORF76224 - 0.021 14.9 2.0 0.037 14.1 1.0 1.9 1 1 1 2 2 2 0 KIAA1045 RING finger zf-C3HC4_3 PF13920.6 ORF76224 - 0.044 13.6 2.9 0.082 12.8 2.9 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 ORF76224 - 0.053 13.4 3.7 0.15 12.0 3.7 1.8 1 0 0 1 1 1 0 PHD-finger zf-RING-like PF08746.11 ORF76224 - 0.058 13.7 5.1 0.15 12.4 4.9 1.9 1 1 0 1 1 1 0 RING-like domain Prok-RING_4 PF14447.6 ORF76224 - 0.069 13.0 1.6 0.2 11.6 1.6 1.8 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-FCS PF06467.14 ORF76224 - 0.5 10.4 4.9 13 5.8 0.9 2.7 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif FANCL_C PF11793.8 ORF76224 - 0.56 10.4 4.7 1.9 8.7 4.7 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain PX PF00787.24 ORF75206 - 3.4e-11 43.1 0.0 6.2e-11 42.3 0.0 1.4 1 0 0 1 1 1 1 PX domain RrnaAD PF00398.20 ORF73623 - 8.5e-28 97.1 0.0 1.1e-27 96.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.14 ORF73623 - 0.00049 19.7 0.0 0.0007 19.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 ORF73623 - 0.0024 18.5 0.0 0.0043 17.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF73623 - 0.022 15.4 0.0 0.046 14.4 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF73623 - 0.034 14.0 0.0 0.056 13.3 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain Glyco_hydro_3_C PF01915.22 ORF73578 - 5.2e-15 55.9 0.0 6.8e-15 55.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 ORF73578 - 2.5e-10 40.3 0.0 4.8e-10 39.4 0.0 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain UL21a PF17636.2 ORF73578 - 0.092 12.8 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Viral Unique Long protein 21a AraC_binding_2 PF14525.6 ORF68353 - 0.0047 16.6 0.7 0.0099 15.6 0.0 1.9 2 0 0 2 2 2 1 AraC-binding-like domain SNARE PF05739.19 ORF64581 - 0.031 14.3 0.2 0.047 13.7 0.2 1.3 1 0 0 1 1 1 0 SNARE domain Ank_2 PF12796.7 ORF53688 - 0.0074 16.9 0.0 0.011 16.3 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF53688 - 0.0077 16.7 0.0 0.015 15.8 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat Ank_5 PF13857.6 ORF53688 - 0.0079 16.5 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF53688 - 0.02 15.4 0.0 0.038 14.4 0.0 1.5 1 0 0 1 1 1 0 Ankyrin repeat Sulfotransfer_2 PF03567.14 ORF50291 - 0.0023 17.9 0.2 0.0041 17.1 0.2 1.4 1 0 0 1 1 1 1 Sulfotransferase family EamA PF00892.20 ORF49604 - 1.6e-17 63.9 23.7 6.5e-13 49.0 7.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family Spike_rec_bind PF09408.10 ORF49604 - 0.029 14.1 0.3 0.04 13.6 0.3 1.2 1 0 0 1 1 1 0 Spike receptor binding domain Ank_2 PF12796.7 ORF48287 - 0.0074 16.9 0.0 0.011 16.3 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF48287 - 0.0077 16.7 0.0 0.015 15.8 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat Ank_5 PF13857.6 ORF48287 - 0.0079 16.5 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF48287 - 0.02 15.4 0.0 0.038 14.4 0.0 1.5 1 0 0 1 1 1 0 Ankyrin repeat PHD PF00628.29 ORF40561 - 0.073 13.0 5.2 0.14 12.1 5.2 1.4 1 0 0 1 1 1 0 PHD-finger Tiam_CC_Ex PF18385.1 ORF40561 - 0.081 13.3 0.0 8.9 6.8 0.0 2.6 1 1 1 2 2 2 0 T-lymphoma invasion and metastasis CC-Ex domain Orn_Arg_deC_N PF02784.16 ORF40561 - 0.085 12.2 0.6 1.9 7.8 0.1 2.2 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FYVE_2 PF02318.16 ORF40561 - 0.15 12.3 4.4 0.18 12.0 2.8 2.0 2 0 0 2 2 2 0 FYVE-type zinc finger PCI PF01399.27 ORF40561 - 0.26 11.8 2.2 2.3 8.7 2.2 2.2 1 1 0 1 1 1 0 PCI domain MS_channel PF00924.18 ORF35709 - 1.5e-26 93.2 0.2 1.8e-26 93.0 0.2 1.0 1 0 0 1 1 1 1 Mechanosensitive ion channel GST_N_3 PF13417.6 ORF35408 - 0.00027 21.3 0.0 0.00057 20.2 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain KH_1 PF00013.29 ORF35166 - 1.4e-06 28.1 0.0 0.00013 21.8 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF35166 - 0.037 13.9 0.0 0.83 9.5 0.0 2.3 2 0 0 2 2 2 0 KH domain Hepatitis_core PF00906.20 ORF35166 - 5.3 6.5 8.6 7.6 6.0 8.6 1.3 1 0 0 1 1 1 0 Hepatitis core antigen Fe_bilin_red PF05996.12 ORF35029 - 0.16 11.6 0.0 2 8.0 0.0 2.1 2 0 0 2 2 2 0 Ferredoxin-dependent bilin reductase GST_N_3 PF13417.6 ORF31618 - 0.00027 21.3 0.0 0.00057 20.2 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Dak2 PF02734.17 ORF30623 - 0.0036 17.2 0.4 0.48 10.3 0.2 2.5 2 1 0 2 2 2 2 DAK2 domain DUF760 PF05542.11 ORF30623 - 0.0098 16.2 0.1 1.5 9.2 0.0 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF760) Ion_trans PF00520.31 ORF30102 - 1.3e-10 40.9 11.2 1.6e-10 40.6 11.2 1.1 1 0 0 1 1 1 1 Ion transport protein EI24 PF07264.11 ORF30102 - 0.00053 20.3 0.6 0.00082 19.7 0.6 1.3 1 1 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) Peptidase_S49_N PF08496.10 ORF30102 - 0.022 14.8 0.1 0.046 13.8 0.1 1.5 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF2207 PF09972.9 ORF30102 - 0.21 10.3 1.6 0.29 9.9 1.6 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2975 PF11188.8 ORF30102 - 0.7 9.8 6.9 1.1 9.1 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) DUF4389 PF14333.6 ORF30102 - 9.8 6.2 11.1 0.96 9.4 0.5 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4389) EamA PF00892.20 ORF29755 - 1.6e-17 63.9 23.7 6.5e-13 49.0 7.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family Spike_rec_bind PF09408.10 ORF29755 - 0.029 14.1 0.3 0.04 13.6 0.3 1.2 1 0 0 1 1 1 0 Spike receptor binding domain EF-hand_1 PF00036.32 ORF29183 - 8.4e-11 40.6 2.3 0.00026 20.3 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF29183 - 1.1e-10 40.6 1.5 0.00038 20.2 0.2 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF29183 - 7.1e-09 36.0 8.8 2.1e-07 31.3 2.5 2.4 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF29183 - 3.6e-07 29.4 1.3 0.016 14.7 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF29183 - 1.2e-06 28.2 5.5 0.0043 16.9 0.7 2.7 1 1 1 2 2 2 2 EF-hand domain pair Phage_Gp23 PF10669.9 ORF29183 - 0.0052 17.1 0.6 0.013 15.8 0.6 1.6 1 0 0 1 1 1 1 Protein gp23 (Bacteriophage A118) DUF4248 PF14053.6 ORF29183 - 0.055 13.5 0.0 0.15 12.1 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4248) Sigma54_CBD PF04963.13 ORF29183 - 0.12 12.2 0.3 0.37 10.6 0.3 1.8 1 1 0 1 1 1 0 Sigma-54 factor, core binding domain FixP_N PF14715.6 ORF29183 - 0.14 11.9 0.2 0.25 11.1 0.2 1.3 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Tiam_CC_Ex PF18385.1 ORF26257 - 0.068 13.6 0.1 9.4 6.7 0.0 2.7 2 1 1 3 3 3 0 T-lymphoma invasion and metastasis CC-Ex domain AATF-Che1 PF13339.6 ORF26257 - 0.19 12.4 1.8 0.24 12.1 0.9 1.7 2 0 0 2 2 2 0 Apoptosis antagonizing transcription factor ABC2_membrane_3 PF12698.7 ORF26257 - 0.29 10.2 0.9 0.35 9.9 0.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein GST_N_3 PF13417.6 ORF23297 - 0.00027 21.3 0.0 0.00057 20.2 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain FYVE PF01363.21 ORF22263 - 0.0079 16.3 18.1 0.0079 16.3 18.1 1.8 2 0 0 2 2 2 1 FYVE zinc finger tRNA_synthFbeta PF17759.1 ORF21437 - 3.2e-36 124.8 0.0 3.9e-36 124.5 0.0 1.1 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 ORF21437 - 2e-10 40.8 0.1 7.1e-10 39.0 0.1 2.0 1 0 0 1 1 1 1 tRNA synthetase B5 domain tRNA-synt_2d PF01409.20 ORF21437 - 0.1 12.1 0.1 0.54 9.7 0.0 2.1 1 1 1 2 2 2 0 tRNA synthetases class II core domain (F) APH PF01636.23 ORF20371 - 0.0014 18.6 0.1 0.0027 17.7 0.1 1.8 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF20371 - 0.064 12.6 0.0 0.092 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain TMEM107 PF14995.6 ORF19391 - 2.1e-14 54.0 9.4 3.1e-14 53.5 9.4 1.3 1 0 0 1 1 1 1 Transmembrane protein DUF4220 PF13968.6 ORF19391 - 0.84 9.0 5.1 1.2 8.5 5.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4220) DUF2518 PF10726.9 ORF19391 - 7.6 6.2 10.6 25 4.5 0.1 2.2 1 1 1 2 2 2 0 Protein of function (DUF2518) RrnaAD PF00398.20 ORF18319 - 8.5e-28 97.1 0.0 1.1e-27 96.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.14 ORF18319 - 0.00049 19.7 0.0 0.0007 19.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 ORF18319 - 0.0024 18.5 0.0 0.0043 17.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF18319 - 0.022 15.4 0.0 0.046 14.4 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF18319 - 0.034 14.0 0.0 0.056 13.3 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain FYVE_2 PF02318.16 ORF17835 - 0.058 13.6 2.8 0.18 12.0 2.8 1.8 1 0 0 1 1 1 0 FYVE-type zinc finger PHD PF00628.29 ORF17835 - 0.073 13.0 5.2 0.14 12.1 5.2 1.4 1 0 0 1 1 1 0 PHD-finger Tiam_CC_Ex PF18385.1 ORF17835 - 0.073 13.5 0.0 8.1 6.9 0.0 2.6 1 1 1 2 2 2 0 T-lymphoma invasion and metastasis CC-Ex domain Orn_Arg_deC_N PF02784.16 ORF17835 - 0.075 12.4 0.6 1.9 7.8 0.1 2.2 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PCI PF01399.27 ORF17835 - 0.16 12.5 1.8 1.7 9.2 1.8 2.2 1 1 0 1 1 1 0 PCI domain GIDE PF12483.8 ORF17771 - 0.0003 20.2 0.0 0.00096 18.6 0.0 1.8 1 1 0 1 1 1 1 E3 Ubiquitin ligase RNA_pol_Rpc4 PF05132.14 ORF14248 - 2.9e-21 76.4 0.6 3.3e-18 66.5 0.0 2.9 2 1 1 3 3 3 2 RNA polymerase III RPC4 DUF2937 PF11157.8 ORF14221 - 0.017 14.8 1.8 0.017 14.8 1.8 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2937) PPIP5K2_N PF18086.1 ORF14221 - 0.093 12.9 1.1 0.67 10.2 0.1 2.5 1 1 0 2 2 2 0 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain Bacillus_HBL PF05791.11 ORF14221 - 2.5 7.9 10.7 0.2 11.5 0.4 3.1 1 1 2 3 3 3 0 Bacillus haemolytic enterotoxin (HBL) zf-CCCH PF00642.24 ORF13481 - 2.5e-14 52.7 6.8 8.8e-07 28.7 0.8 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF13481 - 2.5e-08 33.7 15.1 2.1e-05 24.4 4.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF13481 - 4.6e-05 23.1 10.2 9.6e-05 22.1 2.7 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF13481 - 5.1e-05 23.9 5.7 9.6e-05 23.0 0.5 2.4 1 1 1 2 2 2 1 Torus domain zf-CCCH_2 PF14608.6 ORF13481 - 0.041 14.4 7.8 1.7 9.2 3.0 2.4 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Rsa3 PF14615.6 ORF13481 - 0.06 12.9 0.0 0.18 11.4 0.0 1.8 2 0 0 2 2 2 0 Ribosome-assembly protein 3 KH_1 PF00013.29 ORF110474 - 1.4e-06 28.1 0.0 0.00013 21.8 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF110474 - 0.037 13.9 0.0 0.83 9.5 0.0 2.3 2 0 0 2 2 2 0 KH domain Hepatitis_core PF00906.20 ORF110474 - 5.3 6.5 8.6 7.6 6.0 8.6 1.3 1 0 0 1 1 1 0 Hepatitis core antigen PseudoU_synth_2 PF00849.22 ORF102318 - 9.2e-17 61.6 0.0 2.3e-16 60.3 0.0 1.6 1 1 0 1 1 1 1 RNA pseudouridylate synthase DnaJ PF00226.31 ORF101930 - 3.6e-16 59.0 0.0 1.2e-15 57.3 0.0 1.8 2 0 0 2 2 2 1 DnaJ domain KH_1 PF00013.29 ORF100072 - 1.4e-06 28.1 0.0 0.00013 21.8 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF100072 - 0.037 13.9 0.0 0.83 9.5 0.0 2.3 2 0 0 2 2 2 0 KH domain Hepatitis_core PF00906.20 ORF100072 - 5.3 6.5 8.6 7.6 6.0 8.6 1.3 1 0 0 1 1 1 0 Hepatitis core antigen PEP-utilizers PF00391.23 NODE_27119_length_790_cov_3.049007_g21243_i0reverse_frame_1 - 1.4e-27 95.2 0.4 1.4e-27 95.2 0.4 1.9 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPDK_N PF01326.19 NODE_27119_length_790_cov_3.049007_g21243_i0reverse_frame_1 - 2.3e-21 76.4 0.4 2.9e-21 76.1 0.4 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 NODE_27119_length_790_cov_3.049007_g21243_i0reverse_frame_1 - 0.0012 18.0 0.0 0.002 17.3 0.0 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain CCDC14 PF15254.6 NODE_27086_length_790_cov_897.207947_g21214_i0forward_frame_1 - 0.12 11.1 1.0 0.14 10.8 1.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 Hat1_N PF10394.9 NODE_27046_length_792_cov_11.083223_g21178_i0forward_frame_1 - 4.7e-13 49.7 0.0 7e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus Ribosomal_S14 PF00253.21 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_1 - 0.00039 20.1 9.2 2.8 7.8 0.1 5.7 6 0 0 6 6 6 2 Ribosomal protein S14p/S29e Integrase_H2C2 PF17921.1 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_1 - 0.018 15.1 18.8 9 6.5 0.1 5.9 6 0 0 6 6 6 0 Integrase zinc binding domain Cyclin_C PF02984.19 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_1 - 0.16 12.1 9.2 0.17 12.0 0.6 3.8 1 1 3 4 4 4 0 Cyclin, C-terminal domain Kazal_1 PF00050.21 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_1 - 4.2 7.5 17.0 27 4.9 0.1 5.4 6 0 0 6 6 6 0 Kazal-type serine protease inhibitor domain Tom6 PF17112.5 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_1 - 7.3 6.2 6.5 14 5.2 0.1 3.4 3 0 0 3 3 3 0 Mitochondrial import receptor subunit Tom6, fungal UQ_con PF00179.26 NODE_26991_length_793_cov_466.402375_g18755_i1reverse_frame_3 - 2.4e-25 88.8 0.1 4.5e-25 87.9 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 NODE_26991_length_793_cov_466.402375_g18755_i1reverse_frame_3 - 0.07 13.4 0.1 0.12 12.7 0.0 1.6 2 0 0 2 2 2 0 RWD domain COX8 PF02285.15 NODE_26988_length_793_cov_616.753298_g21129_i0forward_frame_3 - 1 9.3 47.0 7.8 6.5 0.4 10.1 6 2 2 9 9 9 0 Cytochrome oxidase c subunit VIII DUF1622 PF07784.11 NODE_26950_length_794_cov_285.317523_g7054_i2reverse_frame_2 - 0.0081 16.0 0.2 0.026 14.4 0.2 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) DHHC PF01529.20 NODE_26913_length_795_cov_163.414474_g21069_i0reverse_frame_3 - 2.3e-24 86.0 12.6 2.3e-24 86.0 12.6 2.1 1 1 1 2 2 2 1 DHHC palmitoyltransferase PhrC_PhrF PF11131.8 NODE_26913_length_795_cov_163.414474_g21069_i0reverse_frame_3 - 0.11 12.1 0.1 0.39 10.3 0.0 2.0 2 0 0 2 2 2 0 Rap-phr extracellular signalling zf-C4_ClpX PF06689.13 NODE_26913_length_795_cov_163.414474_g21069_i0reverse_frame_3 - 4.3 7.3 10.6 1.6 8.7 1.3 3.4 2 1 1 3 3 3 0 ClpX C4-type zinc finger MIG-14_Wnt-bd PF06664.12 ORF99492 - 0.0042 16.4 1.9 0.0068 15.7 1.9 1.4 1 1 0 1 1 1 1 Wnt-binding factor required for Wnt secretion DUF3899 PF13038.6 ORF99492 - 0.029 14.9 0.3 0.084 13.4 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) TMEM43 PF07787.12 ORF99492 - 0.034 13.5 0.0 0.073 12.4 0.0 1.5 1 0 0 1 1 1 0 Transmembrane protein 43 DUF4064 PF13273.6 ORF99492 - 0.048 13.9 0.8 0.048 13.9 0.8 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) DUF2370 PF10176.9 ORF99492 - 0.056 13.1 0.0 0.099 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) DUF202 PF02656.15 ORF99492 - 0.11 13.0 1.3 1.6 9.2 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF202) DUF1218 PF06749.12 ORF99492 - 0.14 12.7 0.1 0.14 12.7 0.1 2.3 3 1 0 3 3 3 0 Protein of unknown function (DUF1218) DUF872 PF05915.12 ORF99492 - 0.16 12.1 0.2 0.16 12.1 0.2 2.1 1 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) EpsG PF14897.6 ORF99492 - 0.34 10.2 4.9 0.072 12.4 1.9 1.4 2 0 0 2 2 2 0 EpsG family DUF2417 PF10329.9 ORF99492 - 4 6.8 7.2 0.41 10.0 1.2 2.1 1 1 2 3 3 3 0 Region of unknown function (DUF2417) Asp PF00026.23 ORF99248 - 7.8e-19 68.2 0.1 9.2e-19 68.0 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF99248 - 0.0018 18.1 0.0 0.0045 16.8 0.0 1.7 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal FlxA PF14282.6 ORF97788 - 0.0015 18.5 4.1 0.0015 18.5 4.1 3.0 2 1 0 2 2 2 1 FlxA-like protein DUF4407 PF14362.6 ORF97788 - 0.0027 17.1 17.1 0.0068 15.8 17.1 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4407) DASH_Spc19 PF08287.11 ORF97788 - 0.0058 16.5 19.9 0.019 14.8 16.2 2.3 2 0 0 2 2 2 1 Spc19 COG5 PF10392.9 ORF97788 - 0.03 14.5 2.2 1.8 8.7 0.2 2.6 2 0 0 2 2 2 0 Golgi transport complex subunit 5 SGT1 PF07093.11 ORF97788 - 0.08 11.4 14.8 0.093 11.2 14.8 1.2 1 0 0 1 1 1 0 SGT1 protein Rootletin PF15035.6 ORF97788 - 0.084 12.9 14.4 0.18 11.8 14.4 1.5 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Med30 PF11315.8 ORF97788 - 0.084 13.1 9.0 0.091 13.0 6.6 2.0 2 0 0 2 2 2 0 Mediator complex subunit 30 SlyX PF04102.12 ORF97788 - 0.092 13.4 0.1 0.092 13.4 0.1 3.1 3 0 0 3 3 2 0 SlyX Csm1_N PF18504.1 ORF97788 - 0.096 13.0 0.5 0.096 13.0 0.5 3.4 2 1 1 3 3 3 0 Csm1 N-terminal domain HemX PF04375.14 ORF97788 - 0.29 10.4 9.6 0.24 10.7 8.2 1.6 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase TINF2_N PF14973.6 ORF97788 - 0.42 11.0 5.5 1.7 9.0 0.0 2.9 3 0 0 3 3 3 0 TERF1-interacting nuclear factor 2 N-terminus DUF3584 PF12128.8 ORF97788 - 0.51 7.8 23.3 0.047 11.2 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) DUF4665 PF15679.5 ORF97788 - 1.4 9.5 15.0 1.5 9.5 0.4 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4665) NPV_P10 PF05531.12 ORF97788 - 4.6 7.8 12.2 3.8 8.1 1.8 3.4 4 1 0 4 4 4 0 Nucleopolyhedrovirus P10 protein Prefoldin_2 PF01920.20 ORF97788 - 4.7 7.2 29.3 0.057 13.4 11.3 3.5 3 0 0 3 3 3 0 Prefoldin subunit DUF812 PF05667.11 ORF97788 - 4.8 5.9 32.9 14 4.4 32.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF812) FliD_N PF02465.18 ORF97788 - 5.6 7.7 11.3 2 9.2 2.5 2.8 2 2 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DASH_Dam1 PF08653.10 ORF97788 - 6.4 6.7 7.1 10 6.0 0.8 3.4 3 1 1 4 4 4 0 DASH complex subunit Dam1 CDC27 PF09507.10 ORF97788 - 7 5.9 33.6 8.4 5.7 33.6 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 CBAH PF02275.18 ORF96823 - 7.5e-24 84.9 0.0 2.4e-23 83.3 0.0 1.7 1 1 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family Cupin_4 PF08007.12 ORF95056 - 0.0048 16.4 0.4 0.026 14.0 0.4 2.0 1 1 0 1 1 1 1 Cupin superfamily protein Cupin_8 PF13621.6 ORF95056 - 0.027 14.2 3.9 0.11 12.1 3.9 1.9 1 1 0 1 1 1 0 Cupin-like domain PAN_4 PF14295.6 ORF94697 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain PAN_4 PF14295.6 ORF89688 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain GST_N_2 PF13409.6 ORF89476 - 3.6e-17 62.4 0.0 6.1e-17 61.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF89476 - 4.1e-17 62.4 0.0 7.6e-17 61.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF89476 - 5.2e-10 39.2 0.1 1.2e-09 38.0 0.1 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF89476 - 6.5e-10 39.2 0.0 1.5e-09 38.1 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF89476 - 4.9e-08 33.1 0.4 1e-07 32.0 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF89476 - 2.6e-05 24.8 0.0 4.1e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF89476 - 0.00011 22.3 0.1 0.00023 21.3 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF89476 - 0.00044 20.4 0.0 0.00093 19.4 0.0 1.5 1 0 0 1 1 1 1 Glutaredoxin E1_dh PF00676.20 ORF87381 - 1.9e-69 233.9 0.5 2.2e-69 233.7 0.5 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 ORF87381 - 0.0043 16.3 0.1 0.0059 15.8 0.1 1.3 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 ORF87381 - 0.0059 16.4 1.1 0.0085 15.9 1.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Orf78 PF06024.12 ORF85637 - 0.035 14.4 2.8 0.051 13.9 0.3 2.2 2 0 0 2 2 2 0 Orf78 (ac78) Sid-5 PF17204.3 ORF85637 - 0.2 11.8 1.4 0.47 10.7 1.0 1.8 2 0 0 2 2 2 0 Sid-5 family DUF3139 PF11337.8 ORF85637 - 6.7 7.4 11.2 23 5.7 11.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) SAM_MT PF04445.13 ORF84714 - 1.2e-104 348.8 0.0 1.4e-104 348.6 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent methyltransferase Jnk-SapK_ap_N PF09744.9 ORF84580 - 2.9 8.1 45.2 0.21 11.8 19.0 3.1 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 MecA_N PF05223.11 ORF84580 - 3.9 7.8 12.8 0.34 11.2 6.7 2.4 2 2 1 3 3 3 0 NTF2-like N-terminal transpeptidase domain FH2 PF02181.23 ORF84580 - 5 6.1 28.7 0.022 13.9 8.1 2.3 1 1 1 2 2 2 0 Formin Homology 2 Domain DUF1664 PF07889.12 ORF84580 - 5.7 7.0 26.8 0.065 13.3 4.9 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Lebercilin PF15619.6 ORF84580 - 7.8 6.1 46.2 0.58 9.8 9.7 2.6 1 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease ATG16 PF08614.11 ORF84580 - 8.4 6.6 44.1 10 6.3 26.9 2.9 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Pyr_redox_2 PF07992.14 ORF82366 - 4e-06 26.3 0.1 2.5e-05 23.6 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AAA_24 PF13479.6 ORF78099 - 0.032 14.0 0.8 0.06 13.1 0.1 1.8 2 0 0 2 2 2 0 AAA domain ALMT PF11744.8 ORF78099 - 0.64 8.8 2.6 0.63 8.8 0.2 1.9 2 0 0 2 2 2 0 Aluminium activated malate transporter Phage_Gp23 PF10669.9 ORF78099 - 0.69 10.2 8.2 0.53 10.6 4.5 2.2 2 0 0 2 2 2 0 Protein gp23 (Bacteriophage A118) Chi-conotoxin PF16981.5 ORF75249 - 0.26 11.6 2.5 0.35 11.1 0.2 2.3 2 1 0 2 2 2 0 chi-Conotoxin or t superfamily ACT_4 PF13291.6 ORF7312 - 0.00033 21.2 0.0 0.00074 20.1 0.0 1.6 1 0 0 1 1 1 1 ACT domain ACT_6 PF13740.6 ORF7312 - 0.00087 19.2 0.0 0.026 14.5 0.0 2.4 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 ORF7312 - 0.00093 18.9 0.1 0.0026 17.5 0.1 1.9 1 1 0 1 1 1 1 ACT domain Ax_dynein_light PF10211.9 ORF7200 - 0.0087 16.0 1.8 0.0087 16.0 1.8 2.3 2 1 0 2 2 2 1 Axonemal dynein light chain DUF641 PF04859.12 ORF7200 - 0.11 12.9 6.9 0.12 12.7 1.1 2.3 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) DUF4407 PF14362.6 ORF7200 - 0.25 10.7 3.6 0.76 9.1 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF7200 - 0.61 10.2 8.4 0.18 11.9 2.5 2.2 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Tup_N PF08581.10 ORF7200 - 1.2 9.5 9.8 1.4 9.3 2.1 2.4 2 0 0 2 2 2 0 Tup N-terminal SlyX PF04102.12 ORF7200 - 1.2 9.8 5.6 8.3 7.1 0.9 3.1 3 0 0 3 3 3 0 SlyX bZIP_1 PF00170.21 ORF7200 - 1.9 8.6 20.9 0.061 13.4 6.6 3.2 2 1 1 3 3 3 0 bZIP transcription factor APG6_N PF17675.1 ORF7200 - 2.2 8.8 13.7 0.21 12.1 5.3 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region DUF5595 PF18077.1 ORF7200 - 2.9 8.0 8.0 18 5.5 2.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5595) YabA PF06156.13 ORF7200 - 4.1 8.1 6.6 14 6.4 1.5 2.6 2 1 1 3 3 3 0 Initiation control protein YabA DUF4140 PF13600.6 ORF7200 - 4.7 7.7 6.2 3.5 8.1 2.2 2.4 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF1318 PF07027.12 ORF6894 - 0.071 13.6 3.4 3.2 8.3 0.1 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1318) DUF4692 PF15763.5 ORF6894 - 2.1 8.8 15.2 0.33 11.4 10.9 1.9 2 1 1 3 3 3 0 Regulator of human erythroid cell expansion (RHEX) Homeodomain PF00046.29 ORF66096 - 0.0001 22.1 1.6 0.00023 20.9 1.6 1.6 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF66096 - 0.19 11.7 0.0 0.33 10.8 0.0 1.3 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT FKBP_N PF01346.18 ORF66096 - 0.21 12.6 6.0 0.25 12.3 1.5 2.3 2 0 0 2 2 2 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MIG-14_Wnt-bd PF06664.12 ORF65917 - 0.0042 16.4 1.9 0.0068 15.7 1.9 1.4 1 1 0 1 1 1 1 Wnt-binding factor required for Wnt secretion DUF3899 PF13038.6 ORF65917 - 0.029 14.9 0.3 0.084 13.4 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) TMEM43 PF07787.12 ORF65917 - 0.034 13.5 0.0 0.073 12.4 0.0 1.5 1 0 0 1 1 1 0 Transmembrane protein 43 DUF4064 PF13273.6 ORF65917 - 0.048 13.9 0.8 0.048 13.9 0.8 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) DUF2370 PF10176.9 ORF65917 - 0.056 13.1 0.0 0.099 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) DUF202 PF02656.15 ORF65917 - 0.11 13.0 1.3 1.6 9.2 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF202) DUF1218 PF06749.12 ORF65917 - 0.14 12.7 0.1 0.14 12.7 0.1 2.3 3 1 0 3 3 3 0 Protein of unknown function (DUF1218) DUF872 PF05915.12 ORF65917 - 0.16 12.1 0.2 0.16 12.1 0.2 2.1 1 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) EpsG PF14897.6 ORF65917 - 0.34 10.2 4.9 0.072 12.4 1.9 1.4 2 0 0 2 2 2 0 EpsG family DUF2417 PF10329.9 ORF65917 - 4 6.8 7.2 0.41 10.0 1.2 2.1 1 1 2 3 3 3 0 Region of unknown function (DUF2417) HlyC PF02794.16 ORF64760 - 0.088 12.7 0.0 0.17 11.8 0.0 1.5 1 0 0 1 1 1 0 RTX toxin acyltransferase family Phage_integrase PF00589.22 ORF6342 - 1.5e-56 190.9 0.1 2e-56 190.5 0.1 1.2 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 ORF6342 - 1.6e-12 47.5 3.5 3.1e-12 46.6 0.4 2.5 2 1 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Abhydrolase_3 PF07859.13 ORF63222 - 9.1e-27 94.3 0.0 1.3e-26 93.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF63222 - 1.2e-11 44.1 0.0 1.7e-11 43.6 0.0 1.3 1 1 0 1 1 1 1 Steryl acetyl hydrolase COesterase PF00135.28 ORF63222 - 0.0039 16.1 0.0 0.31 9.9 0.0 2.3 2 1 0 2 2 2 2 Carboxylesterase family FlxA PF14282.6 ORF6263 - 0.0015 18.5 4.1 0.0015 18.5 4.1 3.0 2 1 0 2 2 2 1 FlxA-like protein DUF4407 PF14362.6 ORF6263 - 0.0027 17.1 17.1 0.0068 15.8 17.1 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4407) DASH_Spc19 PF08287.11 ORF6263 - 0.0058 16.5 19.9 0.019 14.8 16.2 2.3 2 0 0 2 2 2 1 Spc19 COG5 PF10392.9 ORF6263 - 0.03 14.5 2.2 1.8 8.7 0.2 2.6 2 0 0 2 2 2 0 Golgi transport complex subunit 5 SGT1 PF07093.11 ORF6263 - 0.08 11.4 14.8 0.093 11.2 14.8 1.2 1 0 0 1 1 1 0 SGT1 protein Rootletin PF15035.6 ORF6263 - 0.084 12.9 14.4 0.18 11.8 14.4 1.5 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Med30 PF11315.8 ORF6263 - 0.084 13.1 9.0 0.091 13.0 6.6 2.0 2 0 0 2 2 2 0 Mediator complex subunit 30 SlyX PF04102.12 ORF6263 - 0.092 13.4 0.1 0.092 13.4 0.1 3.1 3 0 0 3 3 2 0 SlyX Csm1_N PF18504.1 ORF6263 - 0.096 13.0 0.5 0.096 13.0 0.5 3.4 2 1 1 3 3 3 0 Csm1 N-terminal domain HemX PF04375.14 ORF6263 - 0.29 10.4 9.6 0.24 10.7 8.2 1.6 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase TINF2_N PF14973.6 ORF6263 - 0.42 11.0 5.5 1.7 9.0 0.0 2.9 3 0 0 3 3 3 0 TERF1-interacting nuclear factor 2 N-terminus DUF3584 PF12128.8 ORF6263 - 0.51 7.8 23.3 0.047 11.2 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) DUF4665 PF15679.5 ORF6263 - 1.4 9.5 15.0 1.5 9.5 0.4 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4665) NPV_P10 PF05531.12 ORF6263 - 4.6 7.8 12.2 3.8 8.1 1.8 3.4 4 1 0 4 4 4 0 Nucleopolyhedrovirus P10 protein Prefoldin_2 PF01920.20 ORF6263 - 4.7 7.2 29.3 0.057 13.4 11.3 3.5 3 0 0 3 3 3 0 Prefoldin subunit DUF812 PF05667.11 ORF6263 - 4.8 5.9 32.9 14 4.4 32.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF812) FliD_N PF02465.18 ORF6263 - 5.6 7.7 11.3 2 9.2 2.5 2.8 2 2 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DASH_Dam1 PF08653.10 ORF6263 - 6.4 6.7 7.1 10 6.0 0.8 3.4 3 1 1 4 4 4 0 DASH complex subunit Dam1 CDC27 PF09507.10 ORF6263 - 7 5.9 33.6 8.4 5.7 33.6 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Metallophos PF00149.28 ORF60429 - 8.6e-05 23.1 1.1 0.00016 22.2 0.6 1.7 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase WD40 PF00400.32 ORF59547 - 3.3e-09 37.2 1.9 0.00048 20.9 0.1 3.2 2 1 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF59547 - 0.014 15.7 0.1 0.049 13.9 0.0 1.9 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain DivIC PF04977.15 ORF59377 - 0.0099 15.6 0.4 0.023 14.5 0.4 1.6 1 0 0 1 1 1 1 Septum formation initiator ZapB PF06005.12 ORF59377 - 0.056 13.9 2.0 0.14 12.6 2.0 1.6 1 0 0 1 1 1 0 Cell division protein ZapB Tcell_CD4_C PF12104.8 ORF59377 - 0.12 12.3 0.4 0.21 11.5 0.4 1.4 1 0 0 1 1 1 0 T cell CD4 receptor C terminal region PAN_4 PF14295.6 ORF59166 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain Asp PF00026.23 ORF58532 - 7.8e-19 68.2 0.1 9.2e-19 68.0 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF58532 - 0.0018 18.1 0.0 0.0045 16.8 0.0 1.7 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal RCC1_2 PF13540.6 ORF52943 - 6.5e-17 60.9 8.4 0.025 14.4 0.0 6.3 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF52943 - 0.0021 18.2 0.4 14 5.7 0.0 4.3 4 1 0 4 4 4 2 Uncharacterised ACR, YagE family COG1723 Methyltransf_11 PF08241.12 ORF52054 - 2.1e-23 82.8 0.0 4.2e-23 81.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF52054 - 3.7e-19 69.2 0.0 1e-18 67.8 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF52054 - 2.2e-13 50.3 0.0 3.2e-13 49.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF52054 - 1.2e-12 47.9 0.1 1.9e-12 47.4 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF52054 - 1.8e-10 41.5 0.0 4e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF52054 - 7.4e-08 32.0 0.0 9.2e-08 31.7 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 ORF52054 - 0.00014 21.8 0.0 0.00021 21.2 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.14 ORF52054 - 0.00074 19.1 0.0 0.0012 18.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 ORF52054 - 0.02 14.5 0.0 0.029 13.9 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW NodS PF05401.11 ORF52054 - 0.033 13.8 0.0 0.061 12.9 0.0 1.4 1 1 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_29 PF03141.16 ORF52054 - 0.04 12.5 0.0 0.063 11.8 0.0 1.3 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase CMAS PF02353.20 ORF52054 - 0.046 13.0 0.0 0.092 12.0 0.0 1.4 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase DREV PF05219.12 ORF52054 - 0.072 12.2 0.0 0.089 11.9 0.0 1.1 1 0 0 1 1 1 0 DREV methyltransferase DUF4262 PF14081.6 ORF52054 - 0.1 12.8 0.2 2.2 8.5 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4262) RrnaAD PF00398.20 ORF52054 - 0.17 10.9 0.0 0.24 10.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase GED PF02212.18 ORF50063 - 0.02 15.1 0.1 0.02 15.1 0.1 2.5 3 1 0 3 3 3 0 Dynamin GTPase effector domain YojJ PF10372.9 ORF50063 - 0.039 14.0 1.9 0.35 11.0 0.2 3.2 1 1 2 3 3 3 0 Bacterial membrane-spanning protein N-terminus DUF4320 PF14208.6 ORF50063 - 0.083 13.0 1.6 0.2 11.7 1.6 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4320) Peptidase_M41 PF01434.18 ORF50063 - 0.23 11.3 6.3 2.9 7.7 0.3 2.3 2 0 0 2 2 2 0 Peptidase family M41 TBCC_N PF16752.5 ORF50063 - 0.41 11.1 10.9 0.22 12.0 4.3 2.9 2 1 1 3 3 3 0 Tubulin-specific chaperone C N-terminal domain XhlA PF10779.9 ORF50063 - 0.46 10.7 0.1 0.46 10.7 0.1 2.5 3 0 0 3 3 3 0 Haemolysin XhlA PCI PF01399.27 ORF50063 - 2.8 8.5 8.9 1.1 9.8 0.5 2.6 1 1 0 2 2 2 0 PCI domain IZUMO PF15005.6 ORF50063 - 4.9 7.7 7.6 2.6 8.6 4.4 2.2 1 1 2 3 3 3 0 Izumo sperm-egg fusion, Ig domain-associated MORN PF02493.20 ORF47658 - 0.00084 19.1 0.0 0.00084 19.1 0.0 5.4 6 0 0 6 6 6 3 MORN repeat Whib PF02467.16 ORF4759 - 3.1 8.4 7.1 4.8 7.9 0.9 2.7 1 1 1 2 2 2 0 Transcription factor WhiB F_actin_cap_B PF01115.17 ORF42775 - 1.8e-66 224.2 0.3 2.1e-66 224.0 0.3 1.0 1 0 0 1 1 1 1 F-actin capping protein, beta subunit Asp PF00026.23 ORF38968 - 7.8e-19 68.2 0.1 9.2e-19 68.0 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF38968 - 0.0018 18.1 0.0 0.0045 16.8 0.0 1.7 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal TMF_DNA_bd PF12329.8 ORF38799 - 0.0095 15.9 10.0 0.0095 15.9 10.0 3.1 2 1 1 3 3 3 1 TATA element modulatory factor 1 DNA binding DUF763 PF05559.11 ORF38799 - 0.14 11.3 6.1 0.17 11.0 6.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF763) ResB PF05140.14 ORF38799 - 0.42 9.3 5.2 0.48 9.1 4.1 1.4 1 1 0 1 1 1 0 ResB-like family DUF3502 PF12010.8 ORF38799 - 1.6 9.4 11.2 0.46 11.1 7.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3502) Membralin PF09746.9 ORF38799 - 3.5 6.6 12.4 2.9 6.8 11.3 1.3 1 1 0 1 1 1 0 Tumour-associated protein GBP_C PF02841.14 ORF38799 - 5.6 6.3 21.5 13 5.1 21.5 1.6 1 1 0 1 1 1 0 Guanylate-binding protein, C-terminal domain AAA_11 PF13086.6 ORF38076 - 2.9e-17 63.3 0.1 6.8e-14 52.3 0.0 2.5 2 1 1 3 3 3 2 AAA domain AAA_12 PF13087.6 ORF38076 - 2.6e-10 40.3 0.0 3.7e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF38076 - 9.4e-08 32.0 0.0 2.2e-07 30.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF38076 - 4e-05 24.0 0.0 6.4e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF38076 - 0.00069 19.4 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase BPD_transp_1 PF00528.22 ORF33130 - 4.9e-13 49.2 13.9 4.9e-13 49.2 13.9 1.7 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component TatD_DNase PF01026.21 ORF32037 - 2.1e-70 237.0 0.0 2.4e-70 236.8 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase DRTGG PF07085.12 ORF32037 - 0.043 13.6 0.0 0.13 12.0 0.0 1.8 1 0 0 1 1 1 0 DRTGG domain ABA_GPCR PF12430.8 ORF31881 - 0.0029 17.4 5.3 0.0048 16.7 5.3 1.3 1 0 0 1 1 1 1 Abscisic acid G-protein coupled receptor DUF2070 PF09843.9 ORF31881 - 6 5.0 9.4 7.4 4.7 9.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FlxA PF14282.6 ORF31085 - 0.0015 18.5 4.1 0.0015 18.5 4.1 3.0 2 1 0 2 2 2 1 FlxA-like protein DUF4407 PF14362.6 ORF31085 - 0.0027 17.1 17.1 0.0068 15.8 17.1 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4407) DASH_Spc19 PF08287.11 ORF31085 - 0.0058 16.5 19.9 0.019 14.8 16.2 2.3 2 0 0 2 2 2 1 Spc19 COG5 PF10392.9 ORF31085 - 0.03 14.5 2.2 1.8 8.7 0.2 2.6 2 0 0 2 2 2 0 Golgi transport complex subunit 5 SGT1 PF07093.11 ORF31085 - 0.08 11.4 14.8 0.093 11.2 14.8 1.2 1 0 0 1 1 1 0 SGT1 protein Rootletin PF15035.6 ORF31085 - 0.084 12.9 14.4 0.18 11.8 14.4 1.5 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Med30 PF11315.8 ORF31085 - 0.084 13.1 9.0 0.091 13.0 6.6 2.0 2 0 0 2 2 2 0 Mediator complex subunit 30 SlyX PF04102.12 ORF31085 - 0.092 13.4 0.1 0.092 13.4 0.1 3.1 3 0 0 3 3 2 0 SlyX Csm1_N PF18504.1 ORF31085 - 0.096 13.0 0.5 0.096 13.0 0.5 3.4 2 1 1 3 3 3 0 Csm1 N-terminal domain HemX PF04375.14 ORF31085 - 0.29 10.4 9.6 0.24 10.7 8.2 1.6 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase TINF2_N PF14973.6 ORF31085 - 0.42 11.0 5.5 1.7 9.0 0.0 2.9 3 0 0 3 3 3 0 TERF1-interacting nuclear factor 2 N-terminus DUF3584 PF12128.8 ORF31085 - 0.51 7.8 23.3 0.047 11.2 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) DUF4665 PF15679.5 ORF31085 - 1.4 9.5 15.0 1.5 9.5 0.4 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4665) NPV_P10 PF05531.12 ORF31085 - 4.6 7.8 12.2 3.8 8.1 1.8 3.4 4 1 0 4 4 4 0 Nucleopolyhedrovirus P10 protein Prefoldin_2 PF01920.20 ORF31085 - 4.7 7.2 29.3 0.057 13.4 11.3 3.5 3 0 0 3 3 3 0 Prefoldin subunit DUF812 PF05667.11 ORF31085 - 4.8 5.9 32.9 14 4.4 32.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF812) FliD_N PF02465.18 ORF31085 - 5.6 7.7 11.3 2 9.2 2.5 2.8 2 2 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DASH_Dam1 PF08653.10 ORF31085 - 6.4 6.7 7.1 10 6.0 0.8 3.4 3 1 1 4 4 4 0 DASH complex subunit Dam1 CDC27 PF09507.10 ORF31085 - 7 5.9 33.6 8.4 5.7 33.6 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 MORN PF02493.20 ORF28054 - 1.3e-06 27.9 21.5 0.0006 19.5 2.9 3.6 3 0 0 3 3 3 2 MORN repeat DUF3173 PF11372.8 ORF28054 - 0.14 12.1 0.2 0.43 10.5 0.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3173) PI3_PI4_kinase PF00454.27 ORF245 - 5.9e-26 91.8 0.3 5.9e-26 91.8 0.3 2.0 1 1 1 2 2 2 1 Phosphatidylinositol 3- and 4-kinase Abhydrolase_3 PF07859.13 ORF21302 - 9.1e-27 94.3 0.0 1.3e-26 93.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF21302 - 1.2e-11 44.1 0.0 1.7e-11 43.6 0.0 1.3 1 1 0 1 1 1 1 Steryl acetyl hydrolase COesterase PF00135.28 ORF21302 - 0.0039 16.1 0.0 0.31 9.9 0.0 2.3 2 1 0 2 2 2 2 Carboxylesterase family FYVE PF01363.21 ORF20545 - 1.5e-08 34.7 7.0 1.5e-08 34.7 7.0 2.4 3 1 0 3 3 3 1 FYVE zinc finger BicD PF09730.9 ORF20545 - 0.0017 16.9 7.5 0.0022 16.5 7.5 1.2 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D DUF2514 PF10721.9 ORF20545 - 0.0021 18.1 5.1 0.0021 18.1 5.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2514) ERM PF00769.19 ORF20545 - 0.014 15.2 15.5 0.02 14.7 15.5 1.2 1 0 0 1 1 1 0 Ezrin/radixin/moesin family DUF465 PF04325.13 ORF20545 - 0.69 10.0 12.2 0.074 13.1 6.9 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF465) FapA PF03961.13 ORF20545 - 1.9 7.0 7.3 2.5 6.6 7.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A FUSC PF04632.12 ORF20545 - 2 6.9 8.1 2.3 6.6 8.1 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family TPR_MLP1_2 PF07926.12 ORF20545 - 2 8.5 22.4 6.2 6.9 2.7 2.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein V_ATPase_I PF01496.19 ORF20545 - 4.3 5.1 4.9 5.2 4.9 4.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PRKG1_interact PF15898.5 ORF20545 - 5.2 8.0 18.1 9.7 7.2 17.9 1.5 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Arginase PF00491.21 ORF20440 - 2.5e-35 122.3 0.1 3e-35 122.1 0.1 1.0 1 0 0 1 1 1 1 Arginase family PAN_4 PF14295.6 ORF19543 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain LMF1 PF06762.14 ORF13844 - 0.00079 18.6 0.1 0.0011 18.2 0.1 1.1 1 0 0 1 1 1 1 Lipase maturation factor DUF3283 PF11686.8 ORF12690 - 0.2 11.5 0.5 25 4.8 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3283) PAN_4 PF14295.6 ORF12271 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain Dicer_dimer PF03368.14 ORF110408 - 6.5e-05 23.0 0.6 0.0068 16.5 0.0 2.2 2 0 0 2 2 2 2 Dicer dimerisation domain ATP_bind_2 PF03668.15 ORF110408 - 0.061 12.6 0.0 0.083 12.2 0.0 1.1 1 0 0 1 1 1 0 P-loop ATPase protein family MORN PF02493.20 ORF109463 - 2.8e-06 26.9 21.8 0.0011 18.7 0.0 5.5 5 0 0 5 5 5 3 MORN repeat Ribosomal_S6 PF01250.17 ORF109463 - 0.1 12.9 2.2 0.5 10.7 0.1 2.4 2 0 0 2 2 2 0 Ribosomal protein S6 RCC1_2 PF13540.6 ORF107923 - 3.4e-21 74.5 12.0 0.0019 17.9 0.1 6.3 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 ORF107923 - 0.0018 18.8 0.0 0.57 10.7 0.0 3.6 4 1 0 4 4 4 1 Spectrin repeat FtsQ PF03799.15 ORF107923 - 0.02 15.7 0.1 44 4.9 0.1 3.7 2 1 2 4 4 4 0 Cell division protein FtsQ PH_TFIIH PF08567.11 ORF107923 - 0.15 12.4 3.2 13 6.2 0.0 3.8 3 2 2 5 5 5 0 TFIIH p62 subunit, N-terminal domain PKD PF00801.20 ORF107923 - 7.3 6.5 9.6 17 5.4 0.0 4.9 5 1 1 6 6 6 0 PKD domain Peptidase_M24 PF00557.24 ORF107802 - 3.4e-54 183.7 0.3 3.8e-54 183.5 0.3 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 CBM39 PF15886.5 ORF107802 - 0.032 14.1 0.0 3.9 7.4 0.0 2.3 2 0 0 2 2 2 0 Carbohydrate binding domain (family 32) Ank_2 PF12796.7 ORF106329 - 1.2e-25 89.9 1.0 3.9e-12 46.6 0.1 3.5 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF106329 - 4.9e-20 69.5 1.8 0.00028 21.1 0.2 5.4 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF106329 - 4.4e-19 68.0 6.5 0.00054 20.3 0.1 5.5 5 0 0 5 5 5 4 Ankyrin repeat Ank_4 PF13637.6 ORF106329 - 1.8e-18 66.6 4.7 6.4e-06 26.6 0.0 3.8 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF106329 - 6.6e-16 58.2 9.8 6.8e-05 23.1 0.0 4.9 1 1 4 5 5 5 5 Ankyrin repeats (many copies) MORN PF02493.20 ORF104410 - 0.00084 19.1 0.0 0.00084 19.1 0.0 5.5 6 0 0 6 6 6 2 MORN repeat Ribosomal_S6 PF01250.17 ORF104410 - 0.086 13.1 2.6 0.39 11.0 0.2 2.3 2 0 0 2 2 2 0 Ribosomal protein S6 DUF5101 PF17031.5 ORF104410 - 0.19 11.9 2.2 0.24 11.5 0.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF5101) DUF5352 PF17303.2 ORF104382 - 4.4 7.1 7.3 1 9.2 0.5 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5352) Pantoate_transf PF02548.15 ORF103516 - 2.3e-105 351.7 0.4 2.6e-105 351.5 0.4 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase Asp_Glu_race PF01177.22 ORF103516 - 0.0038 17.1 0.0 0.0066 16.3 0.0 1.3 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase PEP_mutase PF13714.6 ORF103516 - 0.013 14.9 0.3 0.031 13.7 0.1 1.6 2 0 0 2 2 2 0 Phosphoenolpyruvate phosphomutase EF-hand_1 PF00036.32 ORF103344 - 2e-33 111.4 10.4 9.4e-09 34.2 1.3 4.5 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF103344 - 1.2e-27 96.1 6.1 4.5e-15 55.9 2.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF103344 - 1.9e-25 86.6 9.1 7e-08 31.8 0.1 4.7 3 1 1 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF103344 - 5.4e-23 79.4 12.9 1.5e-07 30.6 0.1 4.9 4 1 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF103344 - 4.5e-18 64.9 13.6 2.9e-07 30.2 0.5 4.2 1 1 3 4 4 4 4 EF-hand domain pair Pkinase PF00069.25 ORF103344 - 3.7e-15 56.0 0.4 1.5e-14 54.0 0.0 2.1 2 1 0 2 2 2 1 Protein kinase domain EF-hand_9 PF14658.6 ORF103344 - 2.2e-09 37.5 0.1 3.1e-06 27.4 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF103344 - 2.7e-08 33.7 7.4 0.00089 19.2 0.6 3.3 2 1 2 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF103344 - 1.5e-05 25.2 4.8 0.0046 17.3 0.6 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Sigma54_CBD PF04963.13 ORF103344 - 0.1 12.5 1.1 0.26 11.1 1.1 1.8 1 1 0 1 1 1 0 Sigma-54 factor, core binding domain PMBR PF09373.10 ORF103344 - 0.11 12.7 0.1 19 5.6 0.0 3.6 4 0 0 4 4 4 0 Pseudomurein-binding repeat BTV_NS2 PF04514.12 ORF103138 - 0.023 13.6 5.9 0.033 13.0 5.9 1.3 1 0 0 1 1 1 0 Bluetongue virus non-structural protein NS2 Esterase PF00756.20 ORF100216 - 3.9e-06 26.7 0.4 5e-06 26.3 0.4 1.5 1 1 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF100216 - 8.2e-05 22.2 0.0 0.0002 20.9 0.0 1.6 2 0 0 2 2 2 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF100216 - 0.00017 21.4 0.0 0.00027 20.7 0.0 1.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF100216 - 0.0016 17.8 0.0 0.0021 17.4 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Esterase_phd PF10503.9 ORF100216 - 0.0074 15.8 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 Esterase PHB depolymerase DLH PF01738.18 ORF100216 - 0.011 15.3 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 0 Dienelactone hydrolase family Abhydrolase_2 PF02230.16 ORF100216 - 0.041 13.7 0.0 0.079 12.7 0.0 1.4 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF100216 - 0.044 14.4 0.1 0.057 14.0 0.1 1.5 1 1 0 1 1 1 0 Alpha/beta hydrolase family Asp2 PF16929.5 ORF100216 - 0.083 11.8 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter TM231 PF10149.9 ORF10015 - 1e-29 103.9 1.4 1.1e-29 103.7 1.4 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 MutL PF13941.6 NODE_27186_length_788_cov_135.918991_g21303_i0reverse_frame_1 - 0.038 12.6 0.1 0.066 11.8 0.1 1.3 1 0 0 1 1 1 0 MutL protein DFP PF04127.15 NODE_27186_length_788_cov_135.918991_g21303_i0reverse_frame_1 - 1.8 8.4 7.0 1.3 8.8 1.0 2.1 2 0 0 2 2 2 0 DNA / pantothenate metabolism flavoprotein Endonuc_Holl PF10107.9 NODE_27186_length_788_cov_135.918991_g21303_i0reverse_frame_1 - 2.8 7.8 17.8 4.2 7.2 3.4 2.4 2 0 0 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase DUF4172 PF13776.6 NODE_27147_length_789_cov_126.563660_g21269_i0forward_frame_1 - 0.013 15.8 0.0 0.024 14.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4172) Glyco_hydro_31 PF01055.26 NODE_27124_length_789_cov_1261.022546_g21248_i0forward_frame_1 - 5.6e-49 167.5 0.1 6.6e-49 167.3 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 zf-RING_2 PF13639.6 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 5.8e-09 36.1 19.6 1.1e-07 32.0 19.6 2.6 1 1 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 1.6e-08 34.2 3.4 3.2e-08 33.2 3.4 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 3.3e-06 26.8 1.4 3.3e-06 26.8 1.4 2.2 2 1 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 1.2e-05 25.2 2.0 1.2e-05 25.2 2.0 2.3 2 1 0 2 2 2 1 RING-type zinc-finger TMEM154 PF15102.6 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 4.4e-05 23.4 0.4 0.0001 22.2 0.4 1.7 1 0 0 1 1 1 1 TMEM154 protein family zf-rbx1 PF12678.7 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.00015 22.0 13.8 0.00093 19.4 13.8 2.4 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.00018 21.5 9.3 0.00086 19.3 9.3 2.1 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger DUF4577 PF15145.6 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.00033 20.7 0.2 0.00052 20.1 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4577) Orf78 PF06024.12 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.0017 18.6 0.3 0.0017 18.6 0.3 2.0 2 0 0 2 2 2 1 Orf78 (ac78) DUF5383 PF17355.2 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.0056 17.0 0.7 0.0056 17.0 0.7 1.7 2 0 0 2 2 1 1 Family of unknown function (DUF5383) zf-C3HC4 PF00097.25 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.0067 16.3 13.7 0.062 13.2 13.7 2.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) DUF5305 PF17231.2 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.0068 15.8 0.7 0.011 15.2 0.7 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5305) SARAF PF06682.12 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.0072 16.0 0.0 0.015 15.0 0.0 1.4 1 1 0 1 1 1 1 SOCE-associated regulatory factor of calcium homoeostasis DUF2207 PF09972.9 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.0091 14.8 0.0 0.012 14.4 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) LRR19-TM PF15176.6 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.018 15.0 2.0 0.052 13.6 1.8 1.9 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Endomucin PF07010.12 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.018 15.0 1.1 0.027 14.5 1.1 1.2 1 0 0 1 1 1 0 Endomucin DUF4711 PF15829.5 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.019 14.9 1.4 0.036 14.0 1.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4711) RINGv PF12906.7 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.021 14.9 6.9 0.04 14.0 6.4 1.8 1 1 0 1 1 1 0 RING-variant domain Peptidase_M56 PF05569.11 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.027 13.7 0.1 0.038 13.2 0.1 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 zf-HC5HC2H_2 PF13832.6 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.032 14.4 2.1 0.032 14.4 2.1 2.2 2 1 0 2 2 2 0 PHD-zinc-finger like domain Podoplanin PF05808.11 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.054 13.6 0.1 0.096 12.8 0.1 1.4 1 0 0 1 1 1 0 Podoplanin EssA PF10661.9 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.061 13.2 0.4 0.061 13.2 0.4 1.9 2 0 0 2 2 1 0 WXG100 protein secretion system (Wss), protein EssA Baculo_RING PF05883.11 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.063 13.3 0.7 0.1 12.6 0.7 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain FANCL_C PF11793.8 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.083 13.1 12.4 1.4 9.1 12.4 2.5 1 1 0 1 1 1 0 FANCL C-terminal domain LRRC37AB_C PF14914.6 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.092 12.7 2.2 0.094 12.6 0.5 1.9 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain zf-RING_5 PF14634.6 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.14 12.1 13.3 0.66 10.0 13.3 2.2 1 1 0 1 1 1 0 zinc-RING finger domain DUF3377 PF11857.8 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.16 11.9 1.3 0.28 11.2 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) EVI2A PF05399.11 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 0.39 10.3 4.0 0.17 11.4 1.7 1.6 1 1 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Zn_ribbon_17 PF17120.5 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 1.9 8.2 12.3 4.4 7.0 12.3 1.7 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type DUF3139 PF11337.8 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 5.7 7.7 6.4 0.39 11.4 0.9 1.9 2 0 0 2 2 1 0 Protein of unknown function (DUF3139) PHD PF00628.29 NODE_27105_length_790_cov_114.095364_g21230_i0reverse_frame_3 - 5.8 6.9 13.9 5.7 6.9 11.4 2.4 1 1 1 2 2 1 0 PHD-finger Pox_LP_H2 PF03356.15 NODE_27105_length_790_cov_114.095364_g21230_i0forward_frame_3 - 0.51 10.2 4.8 0.26 11.1 1.4 2.2 2 0 0 2 2 2 0 Viral late protein H2 Tubulin PF00091.25 NODE_27086_length_790_cov_897.207947_g21214_i0reverse_frame_3 - 6.5e-67 225.6 0.0 7.5e-67 225.4 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 NODE_27086_length_790_cov_897.207947_g21214_i0reverse_frame_3 - 0.001 19.3 0.0 0.0017 18.6 0.0 1.3 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 NODE_27086_length_790_cov_897.207947_g21214_i0reverse_frame_3 - 0.015 15.0 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 NODE_27086_length_790_cov_897.207947_g21214_i0reverse_frame_3 - 0.074 12.2 0.0 0.099 11.8 0.0 1.1 1 0 0 1 1 1 0 Tubulin like NADHdh-2_N PF12155.8 NODE_27086_length_790_cov_897.207947_g21214_i0forward_frame_3 - 0.071 13.5 0.1 0.45 10.9 0.0 2.1 2 0 0 2 2 2 0 NADH dehydrogenase subunit 2 N-terminal SAP130_C PF16014.5 NODE_27086_length_790_cov_897.207947_g21214_i0forward_frame_3 - 0.084 12.0 0.5 0.12 11.4 0.5 1.2 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus PDCD2_C PF04194.13 NODE_27046_length_792_cov_11.083223_g21178_i0reverse_frame_2 - 0.17 11.9 0.2 0.23 11.5 0.2 1.1 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain Hat1_N PF10394.9 NODE_27046_length_792_cov_11.083223_g21178_i0forward_frame_2 - 2.3e-13 50.7 3.0 4.9e-13 49.6 3.0 1.6 1 1 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus RCC1_2 PF13540.6 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 2.1e-11 43.3 14.2 0.057 13.2 0.0 6.3 6 0 0 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat DUF1654 PF07867.11 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 0.035 13.8 4.7 7.9 6.3 0.1 3.9 4 0 0 4 4 4 0 Protein of unknown function (DUF1654) Cyclophil_like PF04126.13 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 0.046 13.5 0.0 1.9 8.3 0.0 2.7 2 1 0 2 2 2 0 Cyclophilin-like Crystall PF00030.19 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 0.093 12.9 1.6 8.9 6.6 0.0 3.1 2 1 0 3 3 3 0 Beta/Gamma crystallin DpnD-PcfM PF14207.6 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 0.2 11.6 2.4 83 3.2 0.0 3.9 4 0 0 4 4 4 0 DpnD/PcfM-like protein DUF3303 PF11746.8 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 0.45 10.8 3.6 52 4.2 0.0 4.0 5 0 0 5 5 5 0 Protein of unknown function (DUF3303) Fez1 PF06818.15 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 0.62 10.5 7.0 22 5.4 0.0 4.2 5 0 0 5 5 5 0 Fez1 DUF4687 PF15747.5 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 0.88 10.1 5.4 6.1 7.4 0.1 3.7 1 1 1 4 4 4 0 Domain of unknown function (DUF4687) Ysc84 PF04366.12 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 2 8.2 7.4 73 3.1 7.4 2.5 1 1 0 1 1 1 0 Las17-binding protein actin regulator Tugs PF17840.1 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_3 - 3.6 7.8 9.3 1.4e+02 2.8 0.1 4.9 5 0 0 5 5 5 0 Tethering Ubl4a to BAGS domain CEP76-C2 PF15627.6 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_2 - 1.8 8.1 6.1 21 4.6 0.1 3.8 5 0 0 5 5 5 0 CEP76 C2 domain Pyridoxal_deC PF00282.19 NODE_27032_length_792_cov_422.446499_g21167_i0reverse_frame_2 - 5.2 5.7 10.0 20 3.8 0.0 4.6 6 0 0 6 6 6 0 Pyridoxal-dependent decarboxylase conserved domain DUF2053 PF09767.9 NODE_27032_length_792_cov_422.446499_g21167_i0forward_frame_2 - 0.0007 19.8 0.2 7.7 6.6 0.0 4.3 1 1 2 3 3 3 2 Predicted membrane protein (DUF2053) zf-C3HC4_2 PF13923.6 NODE_27032_length_792_cov_422.446499_g21167_i0forward_frame_2 - 1.3 8.9 16.6 20 5.1 0.1 5.3 5 0 0 5 5 5 0 Zinc finger, C3HC4 type (RING finger) Baculo_LEF5_C PF11792.8 NODE_27032_length_792_cov_422.446499_g21167_i0forward_frame_2 - 5.4 6.8 11.4 38 4.1 0.1 4.9 5 0 0 5 5 5 0 Baculoviridae late expression factor 5 C-terminal domain Mito_carr PF00153.27 ORF99736 - 1.4e-16 60.2 0.0 2.6e-06 27.3 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein Glyco_hydro_1 PF00232.18 ORF97362 - 9.6e-56 189.1 0.0 4.9e-28 97.8 0.0 2.0 2 0 0 2 2 2 2 Glycosyl hydrolase family 1 DUF3169 PF11368.8 ORF96219 - 0.0038 16.8 4.8 0.0074 15.8 4.8 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3169) Tetraspanin PF00335.20 ORF96219 - 0.013 15.2 0.2 0.02 14.6 0.2 1.3 1 0 0 1 1 1 0 Tetraspanin family Orf78 PF06024.12 ORF96219 - 0.086 13.2 3.9 5.1 7.5 0.1 2.2 2 0 0 2 2 2 0 Orf78 (ac78) PAP2_C PF14360.6 ORF96219 - 0.4 11.2 6.2 0.7 10.5 2.6 2.4 2 0 0 2 2 2 0 PAP2 superfamily C-terminal DUF4229 PF14012.6 ORF96219 - 0.65 10.1 5.8 1 9.5 0.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) Sigma_reg_N PF13800.6 ORF96219 - 1.2 9.4 5.4 5.4 7.4 0.3 2.6 2 1 0 2 2 2 0 Sigma factor regulator N-terminal TRIQK PF15168.6 ORF96219 - 3.7 7.5 6.1 10 6.1 3.8 2.4 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family Med26 PF08711.11 ORF9193 - 2.8e-09 36.8 0.1 5.7e-09 35.9 0.1 1.5 1 0 0 1 1 1 1 TFIIS helical bundle-like domain Ank_2 PF12796.7 ORF890 - 1.3e-35 121.8 0.8 3.2e-14 53.3 0.2 4.1 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF890 - 9.4e-33 112.2 2.3 2.3e-07 31.2 0.0 5.3 3 2 1 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF890 - 1.4e-26 91.7 5.5 0.00014 22.2 0.0 7.0 7 1 1 8 8 8 5 Ankyrin repeat Ank_5 PF13857.6 ORF890 - 4.6e-26 90.5 5.6 1.6e-08 34.7 0.2 5.3 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF890 - 5.5e-24 81.6 1.8 0.0096 16.4 0.0 8.3 9 0 0 9 9 9 5 Ankyrin repeat Asp PF00026.23 ORF8869 - 2.4e-12 46.9 0.1 4.5e-12 46.0 0.1 1.4 1 1 0 1 1 1 1 Eukaryotic aspartyl protease DUF2207 PF09972.9 ORF8869 - 0.014 14.2 0.0 0.014 14.1 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CorC_HlyC PF03471.17 ORF85301 - 5.1e-18 64.9 1.4 7.6e-18 64.3 0.4 1.9 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 ORF85301 - 2.9e-06 27.6 1.5 0.028 14.8 0.1 3.1 3 0 0 3 3 3 2 CBS domain ADH_zinc_N PF00107.26 ORF82092 - 9e-12 45.1 0.0 1.3e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF82092 - 1.8e-10 40.6 0.1 3.4e-10 39.8 0.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 ORF82092 - 5.4e-06 26.0 0.0 1.3e-05 24.8 0.0 1.6 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus SRAP PF02586.14 ORF78561 - 1.3e-43 149.1 0.0 1.7e-43 148.7 0.0 1.1 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) PhyH PF05721.13 ORF77410 - 5.4e-05 23.5 0.6 7.2e-05 23.1 0.6 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Nab2p_Zf1 PF18260.1 ORF74130 - 0.2 11.6 1.0 2.3 8.2 0.1 2.3 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 ALMT PF11744.8 ORF72439 - 4.9 5.9 9.1 6.7 5.4 9.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Esterase PF00756.20 ORF6952 - 1e-28 100.7 0.0 1.1e-28 100.6 0.0 1.1 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF6952 - 8.1e-07 28.7 0.0 1.4e-06 27.9 0.0 1.4 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF6952 - 2.3e-06 27.0 0.0 3.1e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF6952 - 9e-05 23.2 0.1 0.00011 22.9 0.1 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF6952 - 0.00012 21.9 0.0 0.00016 21.4 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold PGAP1 PF07819.13 ORF6952 - 0.00013 21.8 0.0 0.00018 21.3 0.0 1.3 1 0 0 1 1 1 1 PGAP1-like protein Chlorophyllase2 PF12740.7 ORF6952 - 0.012 14.5 0.0 0.019 13.9 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase enzyme DUF2048 PF09752.9 ORF6952 - 0.031 13.4 0.0 0.046 12.8 0.0 1.2 1 0 0 1 1 1 0 Abhydrolase domain containing 18 LIDHydrolase PF10230.9 ORF6952 - 0.12 11.9 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Thioesterase PF00975.20 ORF6952 - 0.13 12.4 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain Allexi_40kDa PF05549.11 ORF6841 - 0.095 12.2 2.2 0.094 12.2 1.0 1.6 1 1 0 1 1 1 0 Allexivirus 40kDa protein YueH PF14166.6 ORF62441 - 0.021 14.6 0.6 0.043 13.7 0.6 1.5 1 0 0 1 1 1 0 YueH-like protein DLH PF01738.18 ORF62441 - 0.056 13.0 0.0 0.098 12.2 0.0 1.4 1 0 0 1 1 1 0 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF62441 - 0.083 12.3 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Prolyl oligopeptidase family Peptidase_C1 PF00112.23 ORF62393 - 8.7e-39 133.9 4.3 1.5e-38 133.1 4.3 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF62393 - 0.0052 15.6 0.4 0.0089 14.8 0.4 1.3 1 0 0 1 1 1 1 Peptidase C1-like family IgaA PF07095.11 ORF60044 - 1.7e-131 439.5 0.0 1.9e-131 439.4 0.0 1.0 1 0 0 1 1 1 1 Intracellular growth attenuator protein IgaA p450 PF00067.22 ORF57869 - 2.4e-06 26.6 0.1 2.7e-06 26.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Imm64 PF15600.6 ORF57869 - 0.02 14.6 0.1 0.037 13.7 0.1 1.4 1 0 0 1 1 1 0 Immunity protein 64 DUF1275 PF06912.11 ORF55497 - 1.6e-16 60.8 9.5 2e-16 60.5 9.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Mersacidin PF16934.5 ORF55497 - 0.08 12.7 0.1 0.15 11.8 0.1 1.4 1 0 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) Asp PF00026.23 ORF47091 - 4.2e-13 49.4 0.1 6.7e-13 48.7 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF2207 PF09972.9 ORF47091 - 0.011 14.6 0.1 0.012 14.4 0.1 1.2 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Ly49 PF08391.10 ORF46959 - 6.2 7.2 11.9 0.098 13.0 3.4 2.3 2 1 0 2 2 2 0 Ly49-like protein, N-terminal region DUF1275 PF06912.11 ORF44865 - 1.6e-16 60.8 9.5 2e-16 60.5 9.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Mersacidin PF16934.5 ORF44865 - 0.08 12.7 0.1 0.15 11.8 0.1 1.4 1 0 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) DUF2407_C PF13373.6 ORF43486 - 0.16 12.2 2.3 0.24 11.6 2.3 1.2 1 0 0 1 1 1 0 DUF2407 C-terminal domain GET2 PF08690.10 ORF43486 - 3.2 7.4 6.4 4 7.0 6.4 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 EMC3_TMCO1 PF01956.16 ORF43486 - 6.4 6.5 9.6 11 5.7 9.6 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks65.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks65.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks65.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks65.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-H2C2_2 PF13465.6 ORF37475 - 2.3e-07 31.0 17.0 3.1e-07 30.5 1.5 3.9 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF37475 - 0.0005 20.4 1.8 0.0005 20.4 1.8 5.1 5 0 0 5 5 5 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF37475 - 0.00068 20.3 1.5 0.00068 20.3 1.5 5.0 4 0 0 4 4 4 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF37475 - 0.31 11.7 8.0 0.091 13.4 1.5 2.3 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats MIEAP PF16026.5 ORF36405 - 0.0015 18.8 2.9 0.54 10.4 0.1 3.0 2 1 1 3 3 3 2 Mitochondria-eating protein Ku_PK_bind PF08785.11 ORF36405 - 0.0062 16.7 2.5 0.04 14.1 0.4 2.5 1 1 1 2 2 2 1 Ku C terminal domain like YopD PF05844.12 ORF36405 - 0.016 14.2 1.8 0.021 13.9 1.8 1.1 1 0 0 1 1 1 0 YopD protein Z1 PF10593.9 ORF36405 - 0.11 12.0 2.5 0.16 11.5 2.5 1.4 1 0 0 1 1 1 0 Z1 domain DUF445 PF04286.12 ORF36405 - 0.22 11.3 5.5 0.37 10.6 5.1 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF445) ZYG-11_interact PF05884.12 ORF36405 - 0.26 10.7 0.6 0.33 10.3 0.6 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 HATPase_c PF02518.26 ORF33943 - 7.6e-11 42.5 0.0 1.1e-10 42.0 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF33943 - 0.014 15.2 0.0 0.022 14.6 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SNF2_N PF00176.23 ORF33348 - 0.12 11.1 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 SNF2 family N-terminal domain LAGLIDADG_3 PF14528.6 ORF29941 - 0.00074 19.8 0.0 0.0016 18.7 0.0 1.5 1 0 0 1 1 1 1 LAGLIDADG-like domain DUF4644 PF15486.6 ORF29941 - 0.054 13.2 0.6 0.13 12.0 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4644) Phage_holin_6_1 PF09682.10 ORF29941 - 0.066 13.6 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage holin of superfamily 6 (Holin_LLH) Unstab_antitox PF09720.10 ORF26418 - 0.0094 16.0 0.2 7.6 6.7 0.1 3.0 1 1 1 2 2 2 0 Putative addiction module component DUF2959 PF11172.8 ORF26418 - 0.011 15.9 1.8 0.011 15.9 1.8 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2959) DUF4618 PF15397.6 ORF26418 - 0.12 11.7 20.4 0.13 11.6 7.8 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) DUF1664 PF07889.12 ORF26418 - 0.19 11.8 15.3 0.95 9.5 1.6 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF26418 - 0.31 10.3 20.6 0.36 10.1 3.5 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) DUF4140 PF13600.6 ORF26418 - 0.4 11.2 0.2 0.4 11.2 0.2 3.7 2 1 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) SKA1 PF07160.12 ORF26418 - 0.45 10.3 16.2 0.41 10.5 2.8 2.5 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 DUF4988 PF16378.5 ORF26418 - 0.75 9.4 11.0 2.8 7.6 0.2 3.2 3 0 0 3 3 3 0 Domain of unknown function XhlA PF10779.9 ORF26418 - 0.92 9.8 16.9 0.18 12.0 2.7 3.8 3 1 1 4 4 4 0 Haemolysin XhlA DivIC PF04977.15 ORF26418 - 0.96 9.3 18.3 0.26 11.1 2.5 3.7 3 0 0 3 3 3 0 Septum formation initiator Spc7 PF08317.11 ORF26418 - 1.2 7.9 22.8 0.84 8.5 2.8 2.5 1 1 0 2 2 2 0 Spc7 kinetochore protein DivIVA PF05103.13 ORF26418 - 1.4 9.0 18.3 2.6 8.1 7.9 3.3 2 2 1 3 3 3 0 DivIVA protein Prominin PF05478.11 ORF26418 - 2.1 6.2 15.9 0.38 8.7 7.5 2.0 1 1 1 2 2 2 0 Prominin Csm1_N PF18504.1 ORF26418 - 2.4 8.6 21.2 0.44 10.9 1.5 4.1 4 1 1 5 5 4 0 Csm1 N-terminal domain DUF948 PF06103.11 ORF26418 - 2.4 8.5 7.5 1.7 8.9 0.2 3.3 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF948) bZIP_1 PF00170.21 ORF26418 - 2.9 8.1 13.4 1.3 9.1 0.5 4.2 3 1 1 4 4 4 0 bZIP transcription factor DUF4407 PF14362.6 ORF26418 - 3.4 6.9 15.9 17 4.6 6.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) TMF_TATA_bd PF12325.8 ORF26418 - 3.9 7.7 22.2 3 8.1 8.1 2.9 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding HemX PF04375.14 ORF26418 - 4.1 6.6 15.2 2.3 7.4 5.6 2.2 1 1 0 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase Jnk-SapK_ap_N PF09744.9 ORF26418 - 6.4 7.0 24.1 6.5 7.0 5.3 3.4 1 1 3 4 4 4 0 JNK_SAPK-associated protein-1 ZapB PF06005.12 ORF26418 - 7.6 7.1 17.5 1.2 9.6 1.4 3.4 3 1 0 3 3 3 0 Cell division protein ZapB FlaC_arch PF05377.11 ORF26418 - 7.9 7.0 15.4 4.6 7.7 0.5 4.8 3 3 1 4 4 4 0 Flagella accessory protein C (FlaC) DLP_helical PF18709.1 ORF26418 - 9.3 5.3 17.2 0.18 11.0 5.5 2.6 1 1 2 3 3 3 0 Dynamin-like helical domain UPF0242 PF06785.11 ORF26418 - 9.4 6.3 26.7 14 5.7 11.3 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus SH3_3 PF08239.11 ORF2387 - 0.0024 18.1 0.0 0.0044 17.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial SH3 domain SH3_4 PF06347.13 ORF2387 - 0.0082 15.9 0.2 0.023 14.5 0.2 1.7 1 0 0 1 1 1 1 Bacterial SH3 domain CMD PF02627.20 ORF2387 - 0.038 14.0 3.9 0.87 9.7 0.2 2.5 2 0 0 2 2 2 0 Carboxymuconolactone decarboxylase family TGT PF01702.18 ORF21354 - 7.3e-62 209.5 0.0 8.5e-62 209.3 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase GntR PF00392.21 ORF15730 - 9.1e-23 79.7 0.2 1.7e-22 78.8 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 ORF15730 - 1.8e-18 67.2 5.1 2.7e-18 66.6 5.1 1.3 1 0 0 1 1 1 1 FCD domain Rrf2 PF02082.20 ORF15730 - 0.0036 17.6 0.0 0.011 16.1 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator HTH_46 PF15977.5 ORF15730 - 0.0071 16.3 0.0 0.031 14.3 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA binding DUF4326 PF14216.6 ORF15730 - 0.024 15.3 0.1 0.048 14.4 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4326) HTH_11 PF08279.12 ORF15730 - 0.16 12.0 0.2 0.58 10.1 0.0 2.0 2 0 0 2 2 2 0 HTH domain Mur_ligase_C PF02875.21 ORF1558 - 2.4e-20 72.6 0.0 6.1e-20 71.3 0.0 1.7 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase_M PF08245.12 ORF1558 - 2.2e-06 27.8 0.0 3.3e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain DUF1275 PF06912.11 ORF13584 - 1.6e-16 60.8 9.5 2e-16 60.5 9.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Mersacidin PF16934.5 ORF13584 - 0.08 12.7 0.1 0.15 11.8 0.1 1.4 1 0 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) UCH PF00443.29 ORF13445 - 7.8e-12 45.2 0.0 1e-11 44.9 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DMPK_coil PF08826.10 ORF108211 - 0.00061 19.9 2.0 0.0012 18.9 2.0 1.5 1 0 0 1 1 1 1 DMPK coiled coil domain like Tropomyosin_1 PF12718.7 ORF108211 - 0.082 13.1 2.0 0.14 12.3 2.0 1.3 1 0 0 1 1 1 0 Tropomyosin like DUF4164 PF13747.6 ORF108211 - 0.19 12.1 6.8 3 8.2 6.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) DSPc PF00782.20 ORF106463 - 5.8e-09 35.9 0.1 1.1e-08 34.9 0.1 1.5 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Cpn60_TCP1 PF00118.24 ORF105904 - 1.8e-37 129.1 3.3 2.1e-37 128.9 3.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family MIEAP PF16026.5 ORF105766 - 0.0015 18.8 2.9 0.54 10.4 0.1 3.0 2 1 1 3 3 3 2 Mitochondria-eating protein Ku_PK_bind PF08785.11 ORF105766 - 0.0062 16.7 2.5 0.04 14.1 0.4 2.5 1 1 1 2 2 2 1 Ku C terminal domain like YopD PF05844.12 ORF105766 - 0.016 14.2 1.8 0.021 13.9 1.8 1.1 1 0 0 1 1 1 0 YopD protein Z1 PF10593.9 ORF105766 - 0.11 12.0 2.5 0.16 11.5 2.5 1.4 1 0 0 1 1 1 0 Z1 domain DUF445 PF04286.12 ORF105766 - 0.22 11.3 5.5 0.37 10.6 5.1 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF445) ZYG-11_interact PF05884.12 ORF105766 - 0.26 10.7 0.6 0.33 10.3 0.6 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 His_Phos_2 PF00328.22 ORF101490 - 0.0016 17.9 0.1 0.0023 17.4 0.1 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) zf-H2C2_2 PF13465.6 ORF101295 - 2.3e-07 31.0 17.0 3.1e-07 30.5 1.5 3.9 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF101295 - 0.0005 20.4 1.8 0.0005 20.4 1.8 5.1 5 0 0 5 5 5 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF101295 - 0.00068 20.3 1.5 0.00068 20.3 1.5 5.0 4 0 0 4 4 4 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF101295 - 0.31 11.7 8.0 0.091 13.4 1.5 2.3 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats DNA_pol_A_exo1 PF01612.20 ORF100401 - 3.3e-17 62.7 0.0 6.4e-17 61.8 0.0 1.4 1 1 0 1 1 1 1 3'-5' exonuclease Sporozoite_P67 PF05642.11 NODE_27355_length_784_cov_31.467290_g21446_i0reverse_frame_1 - 0.011 13.9 3.3 0.012 13.7 3.3 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Mucin PF01456.17 NODE_27355_length_784_cov_31.467290_g21446_i0reverse_frame_1 - 0.019 14.9 23.3 0.019 14.9 23.3 1.9 2 0 0 2 2 2 0 Mucin-like glycoprotein DUF3439 PF11921.8 NODE_27355_length_784_cov_31.467290_g21446_i0reverse_frame_1 - 0.16 11.9 18.8 0.36 10.8 18.8 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) EMC3_TMCO1 PF01956.16 NODE_27339_length_784_cov_145.168224_g21430_i0reverse_frame_1 - 0.038 13.7 0.1 0.059 13.1 0.1 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like NAD_binding_9 PF13454.6 NODE_27317_length_785_cov_2.649333_g21411_i0forward_frame_1 - 7.1e-31 107.3 0.0 9.6e-31 106.9 0.0 1.2 1 0 0 1 1 1 1 FAD-NAD(P)-binding Pyr_redox_2 PF07992.14 NODE_27317_length_785_cov_2.649333_g21411_i0forward_frame_1 - 0.00021 20.6 0.0 0.0003 20.1 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 NODE_27317_length_785_cov_2.649333_g21411_i0forward_frame_1 - 0.00053 20.2 0.0 0.0046 17.2 0.0 2.4 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 NODE_27317_length_785_cov_2.649333_g21411_i0forward_frame_1 - 0.00069 19.3 0.0 0.073 12.6 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 NODE_27317_length_785_cov_2.649333_g21411_i0forward_frame_1 - 0.043 13.1 0.1 0.26 10.5 0.0 2.0 2 0 0 2 2 2 0 Thi4 family K_oxygenase PF13434.6 NODE_27317_length_785_cov_2.649333_g21411_i0forward_frame_1 - 0.054 12.6 0.0 0.42 9.7 0.0 2.0 1 1 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) Aminotran_1_2 PF00155.21 NODE_27278_length_786_cov_2.745672_g21383_i0forward_frame_1 - 2e-21 76.6 0.0 2.5e-21 76.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 NODE_27278_length_786_cov_2.745672_g21383_i0forward_frame_1 - 0.00061 19.2 0.0 0.00092 18.6 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family ABC_tran PF00005.27 NODE_27276_length_786_cov_2.972037_g21381_i0reverse_frame_1 - 3.8e-17 63.1 0.3 1.3e-09 38.6 0.0 2.2 2 0 0 2 2 2 2 ABC transporter DUF910 PF06014.11 NODE_27276_length_786_cov_2.972037_g21381_i0reverse_frame_1 - 0.018 15.1 0.0 0.041 13.9 0.0 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF910) MMTV_SAg PF01054.17 NODE_27276_length_786_cov_2.972037_g21381_i0reverse_frame_1 - 0.084 12.4 0.0 3.6 7.1 0.0 2.2 2 0 0 2 2 2 0 Mouse mammary tumour virus superantigen Sec16 PF12932.7 NODE_27241_length_787_cov_1.768617_g21349_i0reverse_frame_2 - 0.082 13.5 0.0 0.13 12.9 0.0 1.3 1 0 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region Spore_III_AF PF09581.10 NODE_27207_length_787_cov_725.644947_g21320_i0reverse_frame_2 - 0.17 11.9 0.6 0.29 11.1 0.6 1.3 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) DUF3888 PF13027.6 NODE_27204_length_787_cov_2111.924202_g9198_i9reverse_frame_3 - 0.0057 17.1 0.2 0.016 15.6 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3888) V_ATPase_I PF01496.19 NODE_27147_length_789_cov_126.563660_g21269_i0forward_frame_3 - 0.38 8.6 9.2 0.46 8.3 9.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FemAB PF02388.16 NODE_27147_length_789_cov_126.563660_g21269_i0forward_frame_3 - 1.4 7.7 11.7 2.1 7.1 11.7 1.2 1 0 0 1 1 1 0 FemAB family GDA1_CD39 PF01150.17 NODE_27124_length_789_cov_1261.022546_g21248_i0forward_frame_3 - 0.034 12.8 0.8 0.05 12.3 0.8 1.1 1 0 0 1 1 1 0 GDA1/CD39 (nucleoside phosphatase) family Metallophos PF00149.28 ORF94602 - 6.2e-08 33.4 0.5 1e-07 32.7 0.5 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF94602 - 0.0052 17.0 0.0 0.1 12.8 0.0 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PhoD PF09423.10 ORF94602 - 0.16 11.0 1.5 0.24 10.3 1.5 1.3 1 0 0 1 1 1 0 PhoD-like phosphatase DUF3007 PF11460.8 ORF88496 - 0.011 15.9 0.1 0.018 15.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) Mo-co_dimer PF03404.16 ORF88310 - 1.6e-38 131.9 0.0 2.9e-38 131.0 0.0 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain Oxidored_molyb PF00174.19 ORF88310 - 2.3e-32 112.0 0.1 4.9e-32 110.9 0.1 1.5 2 0 0 2 2 2 1 Oxidoreductase molybdopterin binding domain Big_7 PF17957.1 ORF88310 - 0.096 13.5 0.0 0.16 12.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial Ig domain Galactosyl_T PF01762.21 ORF86707 - 2.1e-11 44.0 0.0 2.8e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Galactosyltransferase MFS_1 PF07690.16 ORF85297 - 2.5e-10 39.8 22.3 8.8e-05 21.6 0.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MMR_HSR1_Xtn PF16897.5 ORF78107 - 0.05 13.6 2.8 0.084 12.9 0.4 2.4 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain Transferase PF02458.15 ORF76682 - 0.0026 16.5 0.0 0.13 10.9 0.0 2.0 2 0 0 2 2 2 2 Transferase family Condensation PF00668.20 ORF76682 - 0.16 10.6 0.2 0.26 9.9 0.2 1.2 1 0 0 1 1 1 0 Condensation domain rOmpB PF12334.8 ORF76032 - 0.031 13.7 0.3 5.3 6.4 0.0 2.8 3 0 0 3 3 3 0 Rickettsia outer membrane protein B He_PIG_assoc PF10632.9 ORF76032 - 0.054 13.2 1.8 3.6 7.4 0.1 2.5 2 0 0 2 2 2 0 He_PIG associated, NEW1 domain of bacterial glycohydrolase Exo_endo_phos PF03372.23 ORF73567 - 0.0052 16.3 0.2 0.01 15.4 0.2 1.6 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family DUF5033 PF16436.5 ORF64555 - 0.0098 15.9 0.2 0.054 13.4 0.0 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF5033) DNA_pol3_tau_4 PF12168.8 ORF64555 - 0.04 14.4 0.2 0.07 13.7 0.2 1.3 1 0 0 1 1 1 0 DNA polymerase III subunits tau domain IV DnaB-binding RNA_pol_3_Rpc31 PF11705.8 ORF64555 - 1 9.6 9.9 1.4 9.1 9.9 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 NOA36 PF06524.12 ORF64555 - 3.5 6.9 7.6 4.8 6.4 7.6 1.1 1 0 0 1 1 1 0 NOA36 protein Ribosomal_S6e PF01092.19 ORF59321 - 1.4e-51 173.6 1.6 3e-51 172.6 1.6 1.5 1 0 0 1 1 1 1 Ribosomal protein S6e AAA_23 PF13476.6 ORF59321 - 0.0026 18.3 10.1 0.0034 17.9 10.1 1.3 1 0 0 1 1 1 1 AAA domain Sacchrp_dh_NADP PF03435.18 ORF59321 - 0.15 12.3 0.7 0.28 11.5 0.2 1.6 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain RR_TM4-6 PF06459.12 ORF59321 - 2.6 7.8 14.4 3.5 7.4 14.4 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CEP63 PF17045.5 ORF59298 - 0.00045 20.2 2.4 0.00076 19.5 2.4 1.3 1 0 0 1 1 1 1 Centrosomal protein of 63 kDa XLF PF09302.11 ORF59298 - 0.0014 18.9 1.1 0.82 9.8 0.1 2.6 2 1 1 3 3 3 2 XLF-Cernunnos, XRcc4-like factor, NHEJ component NYD-SP28 PF14772.6 ORF59298 - 0.0058 16.7 2.8 0.26 11.4 0.3 2.5 1 1 1 2 2 2 2 Sperm tail Sec8_exocyst PF04048.14 ORF59298 - 0.024 14.5 1.1 0.49 10.3 0.1 2.1 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain PDZ_1 PF12812.7 ORF59298 - 0.03 14.4 0.0 0.083 12.9 0.0 1.8 2 0 0 2 2 2 0 PDZ-like domain SPATA24 PF15175.6 ORF59298 - 0.11 12.3 5.0 1.1 9.1 0.6 2.3 1 1 1 2 2 2 0 Spermatogenesis-associated protein 24 PKcGMP_CC PF16808.5 ORF59298 - 0.38 10.6 13.3 0.82 9.6 2.6 3.8 3 1 1 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Zein-binding PF04576.15 ORF59298 - 2.3 8.6 8.5 1.4 9.2 0.4 3.3 2 2 1 3 3 3 0 Zein-binding tRNA-synt_1c_C PF03950.18 ORF58619 - 3.7e-37 127.9 0.0 4.9e-37 127.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1c PF00749.21 ORF58619 - 0.013 14.4 0.0 0.018 13.9 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain Peptidase_C13 PF01650.18 ORF52574 - 2.1e-13 50.4 0.6 2.9e-13 49.9 0.6 1.1 1 0 0 1 1 1 1 Peptidase C13 family Leuk-A4-hydro_C PF09127.11 ORF43118 - 1.3e-23 83.2 0.0 2.2e-23 82.5 0.0 1.4 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1 PF01433.20 ORF43118 - 1.7e-11 44.1 0.1 3.1e-11 43.3 0.1 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain FliG_N PF14842.6 ORF43118 - 0.071 13.7 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 FliG N-terminal domain HHH_9 PF17674.1 ORF42780 - 0.21 12.5 0.8 0.41 11.6 0.8 1.5 1 0 0 1 1 1 0 HHH domain Anoctamin PF04547.12 ORF42780 - 0.57 9.0 2.1 11 4.7 0.1 1.9 1 1 1 2 2 2 0 Calcium-activated chloride channel PGA2 PF07543.12 ORF3642 - 0.031 14.2 4.4 0.042 13.8 4.4 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 DUF2052 PF09747.9 ORF3642 - 0.61 10.2 10.7 0.79 9.8 10.7 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) CDC45 PF02724.14 ORF3642 - 6.4 4.9 11.8 7.8 4.6 11.8 1.1 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF3642 - 6.9 4.6 12.3 8.6 4.3 12.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi WD40 PF00400.32 ORF35113 - 8.7e-20 70.7 1.5 0.00035 21.3 0.0 5.4 4 1 0 4 4 4 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF35113 - 2.9e-16 59.5 0.1 3.9e-06 27.1 0.1 3.3 2 1 0 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Nucleoporin_N PF08801.11 ORF35113 - 0.00042 19.2 0.1 0.7 8.6 0.0 2.6 2 1 0 2 2 2 2 Nup133 N terminal like PQQ_3 PF13570.6 ORF35113 - 0.0014 19.1 0.1 2 9.0 0.0 3.0 2 0 0 2 2 2 2 PQQ-like domain PALB2_WD40 PF16756.5 ORF35113 - 0.012 14.5 0.6 0.089 11.7 0.1 2.5 2 1 0 3 3 3 0 Partner and localizer of BRCA2 WD40 domain Kelch_3 PF13415.6 ORF35113 - 0.14 12.5 0.0 5.7 7.3 0.0 2.5 2 0 0 2 2 2 0 Galactose oxidase, central domain NTP_transferase PF00483.23 ORF34892 - 0.00033 20.3 0.0 0.0014 18.3 0.0 1.8 1 1 0 1 1 1 1 Nucleotidyl transferase FhuF PF06276.12 ORF31516 - 1.6e-30 106.6 0.7 1.6e-30 106.6 0.7 1.6 2 0 0 2 2 2 1 Ferric iron reductase FhuF-like transporter FhuF_C PF11575.8 ORF31516 - 1.2e-07 31.5 6.7 2.3e-07 30.6 6.7 1.5 1 0 0 1 1 1 1 FhuF 2Fe-2S C-terminal domain CAP_GLY PF01302.25 ORF31227 - 2.1e-20 72.5 2.8 3.2e-20 71.9 2.8 1.3 1 0 0 1 1 1 1 CAP-Gly domain Ubiquitin_2 PF14560.6 ORF31227 - 2.5e-19 69.5 0.0 4.3e-19 68.8 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin-like domain ubiquitin PF00240.23 ORF31227 - 0.00056 19.6 0.0 0.002 17.8 0.0 1.9 1 1 0 1 1 1 1 Ubiquitin family Spc7 PF08317.11 ORF30912 - 0.0023 16.9 23.3 0.018 14.0 13.5 2.2 1 1 1 2 2 2 2 Spc7 kinetochore protein IPT PF01745.16 ORF30912 - 0.052 12.9 0.5 0.072 12.5 0.5 1.2 1 0 0 1 1 1 0 Isopentenyl transferase Telomere_res PF16684.5 ORF30912 - 0.11 11.9 10.0 0.019 14.5 6.1 1.6 1 1 1 2 2 2 0 Telomere resolvase HrpB7 PF09486.10 ORF30912 - 0.13 12.7 2.4 0.31 11.4 2.2 1.7 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) V-SNARE PF05008.15 ORF30912 - 0.24 11.8 17.9 1.2 9.5 4.4 3.6 3 1 1 4 4 4 0 Vesicle transport v-SNARE protein N-terminus FAM76 PF16046.5 ORF30912 - 0.3 10.4 20.3 0.43 9.9 19.9 1.6 1 1 0 1 1 1 0 FAM76 protein DUF3552 PF12072.8 ORF30912 - 0.52 9.7 21.4 0.53 9.7 20.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) TPR_MLP1_2 PF07926.12 ORF30912 - 0.54 10.3 18.5 8.8 6.4 17.9 2.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein HR1 PF02185.16 ORF30912 - 0.71 10.0 10.2 2.2 8.4 5.8 2.7 2 0 0 2 2 2 0 Hr1 repeat MscS_porin PF12795.7 ORF30912 - 0.94 9.0 15.4 2 7.9 9.8 2.2 1 1 0 2 2 2 0 Mechanosensitive ion channel porin domain DUF4407 PF14362.6 ORF30912 - 1.1 8.5 9.4 1.6 8.0 9.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) UPF0242 PF06785.11 ORF30912 - 1.4 9.0 23.6 0.61 10.2 18.4 2.4 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus V_ATPase_I PF01496.19 ORF30912 - 1.7 6.5 13.3 2.1 6.1 13.3 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NPV_P10 PF05531.12 ORF30912 - 1.8 9.1 7.0 3.9 8.0 3.3 2.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein BLOC1_2 PF10046.9 ORF30912 - 2.2 8.7 16.3 0.31 11.4 6.6 2.5 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GrpE PF01025.19 ORF30912 - 2.8 7.6 22.0 0.49 10.0 2.8 2.4 1 1 1 2 2 2 0 GrpE Snapin_Pallidin PF14712.6 ORF30912 - 3.3 8.2 14.7 6.9 7.2 4.7 3.0 1 1 2 3 3 3 0 Snapin/Pallidin Fez1 PF06818.15 ORF30912 - 5.5 7.4 22.3 14 6.1 14.4 2.1 1 1 1 2 2 2 0 Fez1 LMBR1 PF04791.16 ORF30912 - 5.6 5.8 11.1 6.3 5.6 11.1 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein Allexi_40kDa PF05549.11 ORF30912 - 6.1 6.3 10.2 1.5 8.3 6.0 1.9 2 1 0 2 2 2 0 Allexivirus 40kDa protein DUF1910 PF08928.10 ORF30912 - 8.1 6.5 17.2 5.5 7.0 4.3 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF1910) RP-C_C PF11800.8 ORF30912 - 8.1 6.5 7.8 9.6 6.2 7.2 1.5 1 1 0 1 1 1 0 Replication protein C C-terminal region Pkinase PF00069.25 ORF30496 - 1e-59 202.1 0.2 1.3e-59 201.8 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30496 - 2.1e-37 128.8 0.0 2.7e-37 128.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF30496 - 1.9e-08 34.0 0.0 2.3e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF30496 - 1.7e-06 27.2 0.3 2e-06 27.0 0.3 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF30496 - 4.9e-05 22.8 0.2 7.8e-05 22.1 0.2 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF30496 - 0.018 14.9 0.4 0.23 11.3 0.2 1.9 1 1 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF30496 - 0.019 13.7 0.0 0.026 13.3 0.0 1.3 1 1 0 1 1 1 0 Fungal protein kinase DMT_YdcZ PF04657.13 ORF26873 - 1.1 9.5 7.9 0.091 13.0 1.9 2.1 2 1 0 2 2 2 0 Putative inner membrane exporter, YdcZ PMSR PF01625.21 ORF26062 - 7.4e-56 188.6 0.1 9.6e-56 188.2 0.1 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase AGH PF17558.2 ORF23626 - 0.0056 16.8 0.3 0.016 15.4 0.0 1.9 2 0 0 2 2 2 1 Androgenic gland hormone ACT PF01842.25 ORF23199 - 4.5e-20 71.1 0.3 2.2e-09 36.9 0.2 2.3 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 ORF23199 - 0.0011 19.5 0.0 0.094 13.3 0.0 2.2 2 0 0 2 2 2 1 ACT domain ACT_6 PF13740.6 ORF23199 - 0.13 12.3 0.2 3.9 7.5 0.1 2.6 3 0 0 3 3 3 0 ACT domain TPR_2 PF07719.17 ORF17966 - 1e-15 56.5 1.3 6e-05 22.9 0.0 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF17966 - 1.1e-15 56.7 0.2 5.1e-05 22.9 0.0 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF17966 - 8.9e-10 38.0 0.1 0.0056 16.8 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF17966 - 2.2e-07 31.3 2.0 2.4e-05 24.7 0.5 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF17966 - 3.6e-07 30.7 2.4 0.001 19.6 1.4 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF17966 - 2.5e-06 27.5 0.7 0.00013 22.0 0.2 2.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF17966 - 5e-06 26.9 4.7 0.027 15.3 0.9 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF17966 - 0.00017 21.8 0.0 0.00052 20.2 0.0 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 ORF17966 - 0.00018 21.1 1.6 0.19 11.4 0.1 3.5 2 1 2 4 4 4 2 TPR repeat TPR_17 PF13431.6 ORF17966 - 0.00031 20.9 0.0 0.23 11.9 0.1 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF17966 - 0.0049 17.1 3.8 3.5 8.0 0.0 3.2 2 1 1 3 3 3 1 Tetratricopeptide repeat CAP_C PF08603.11 ORF17966 - 0.0062 16.2 0.2 0.0089 15.7 0.2 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) C terminal TPR_7 PF13176.6 ORF17966 - 0.0089 16.0 2.0 9.8 6.5 0.0 3.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF17966 - 0.027 15.1 0.2 10 7.0 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat Wtap PF17098.5 ORF15779 - 0.25 11.3 16.6 0.36 10.7 12.6 2.9 1 1 0 1 1 1 0 WTAP/Mum2p family SLATT_1 PF18181.1 ORF15779 - 0.28 11.1 4.4 5.1 7.0 0.3 2.6 2 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 DUF641 PF04859.12 ORF15779 - 7.3 6.9 22.6 8.8 6.7 3.0 3.7 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF4136 PF13590.6 ORF13468 - 0.15 12.7 0.2 0.34 11.5 0.1 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4136) tRNA_anti-codon PF01336.25 ORF11654 - 1.2e-09 38.0 0.1 2e-09 37.3 0.1 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain ALIX_LYPXL_bnd PF13949.6 ORF11654 - 0.25 10.6 1.0 2.3 7.4 0.0 2.3 2 1 1 3 3 3 0 ALIX V-shaped domain binding to HIV Brr6_like_C_C PF10104.9 ORF108742 - 1.4e-19 70.2 3.2 2.1e-19 69.6 3.2 1.3 1 0 0 1 1 1 1 Di-sulfide bridge nucleocytoplasmic transport domain CytochromB561_N PF09786.9 ORF105149 - 7.7 5.4 7.0 9.8 5.0 7.0 1.1 1 0 0 1 1 1 0 Cytochrome B561, N terminal RRM_1 PF00076.22 ORF104626 - 4.2e-24 84.2 0.1 7.2e-17 61.0 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF104626 - 1.2e-05 25.4 0.0 9e-05 22.5 0.0 2.2 2 1 0 2 2 2 1 RNA recognition motif PAM2 PF07145.15 ORF101136 - 0.0029 17.2 0.4 0.0029 17.2 0.4 2.1 2 0 0 2 2 2 1 Ataxin-2 C-terminal region Torus PF16131.5 ORF101136 - 0.1 13.3 1.1 0.19 12.4 1.1 1.4 1 0 0 1 1 1 0 Torus domain zf_CCCH_4 PF18345.1 ORF101136 - 0.2 11.8 2.8 0.4 10.8 2.8 1.5 1 0 0 1 1 1 0 Zinc finger domain Antimicrobial17 PF08129.11 ORF101077 - 0.085 12.9 0.3 0.23 11.5 0.1 1.8 2 0 0 2 2 2 0 Alpha/beta enterocin family SHIPPO-rpt PF07004.12 ORF101077 - 0.52 11.3 18.8 13 6.9 0.7 5.4 6 0 0 6 6 6 0 Sperm-tail PG-rich repeat ABC_tran PF00005.27 ORF100186 - 7.6e-21 75.1 0.0 2.6e-20 73.3 0.0 1.9 1 1 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF100186 - 0.0078 15.7 0.0 0.15 11.5 0.0 2.0 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain CRAL_TRIO_N PF03765.15 NODE_27476_length_781_cov_92.730563_g21553_i0forward_frame_1 - 0.066 13.4 0.3 0.12 12.5 0.3 1.3 1 0 0 1 1 1 0 CRAL/TRIO, N-terminal domain FliT PF05400.13 NODE_27457_length_781_cov_356.660858_g21021_i1reverse_frame_1 - 0.14 12.9 12.1 2.2 9.1 1.1 2.8 1 1 1 2 2 2 0 Flagellar protein FliT DDE_Tnp_IS66 PF03050.14 NODE_27457_length_781_cov_356.660858_g21021_i1reverse_frame_1 - 1.2 8.6 5.5 2 7.8 5.5 1.3 1 0 0 1 1 1 0 Transposase IS66 family Chalcone_2 PF16035.5 NODE_27457_length_781_cov_356.660858_g21021_i1reverse_frame_1 - 6.2 6.5 10.8 8.5 6.1 9.9 1.8 1 1 0 1 1 1 0 Chalcone isomerase like DUF3782 PF12644.7 NODE_27457_length_781_cov_356.660858_g21021_i1reverse_frame_1 - 9.7 6.4 11.8 0.65 10.2 0.2 3.8 2 2 1 3 3 3 0 Protein of unknown function (DUF3782) DXP_synthase_N PF13292.6 NODE_27440_length_782_cov_4.186078_g21522_i0reverse_frame_1 - 3.5e-43 147.8 0.0 6.8e-43 146.8 0.0 1.5 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase polyprenyl_synt PF00348.17 NODE_27440_length_782_cov_4.186078_g21522_i0reverse_frame_1 - 7.6e-24 84.2 0.0 1e-23 83.7 0.0 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase Arm-DNA-bind_3 PF13356.6 NODE_27440_length_782_cov_4.186078_g21522_i0reverse_frame_1 - 0.1 13.0 0.1 0.22 11.9 0.1 1.6 1 1 0 1 1 1 0 Arm DNA-binding domain DUF4116 PF13475.6 NODE_27415_length_782_cov_218.313253_g21497_i0reverse_frame_1 - 4.4e-58 192.8 0.0 1.2e-12 47.4 0.0 5.7 3 2 3 6 6 6 6 Domain of unknown function (DUF4116) ScsC_N PF18312.1 NODE_27415_length_782_cov_218.313253_g21497_i0reverse_frame_1 - 0.49 10.2 4.3 17 5.4 0.1 3.9 4 0 0 4 4 4 0 Copper resistance protein ScsC N-terminal domain CRCB PF02537.15 NODE_27407_length_783_cov_2.596257_g21491_i0reverse_frame_1 - 3.8 7.9 7.0 8.7 6.7 6.6 1.7 1 1 1 2 2 2 0 CrcB-like protein, Camphor Resistance (CrcB) Cass2 PF14526.6 NODE_27378_length_783_cov_274.050802_g21465_i0forward_frame_1 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 Integron-associated effector binding protein Cass2 PF14526.6 NODE_27377_length_783_cov_278.193850_g21464_i0reverse_frame_1 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 Integron-associated effector binding protein Cass2 PF14526.6 NODE_27376_length_783_cov_315.803476_g21463_i0reverse_frame_1 - 0.074 13.2 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Integron-associated effector binding protein DMAP1_like PF17024.5 NODE_27376_length_783_cov_315.803476_g21463_i0forward_frame_1 - 0.086 13.0 0.8 3.3 7.9 0.1 2.3 2 0 0 2 2 2 0 Putative DMAP1-like Glyco_hydro_31 PF01055.26 NODE_27365_length_783_cov_784.377005_g21455_i0reverse_frame_1 - 3.1e-48 165.0 0.2 3.9e-48 164.7 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 NODE_27365_length_783_cov_784.377005_g21455_i0reverse_frame_1 - 0.057 13.7 0.2 0.11 12.8 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) EphA2_TM PF14575.6 NODE_27355_length_784_cov_31.467290_g21446_i0forward_frame_3 - 0.033 15.1 1.3 0.058 14.3 1.3 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF3311 PF11755.8 NODE_27355_length_784_cov_31.467290_g21446_i0forward_frame_3 - 0.041 13.8 2.2 0.041 13.8 2.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3311) ECSCR PF15820.5 NODE_27355_length_784_cov_31.467290_g21446_i0forward_frame_3 - 7.5 6.4 12.8 15 5.5 12.8 1.4 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Yip1 PF04893.17 NODE_27355_length_784_cov_31.467290_g21446_i0forward_frame_2 - 0.0048 16.6 1.4 0.064 13.0 0.0 2.1 2 0 0 2 2 2 1 Yip1 domain Transformer PF06495.11 NODE_27355_length_784_cov_31.467290_g21446_i0forward_frame_2 - 0.71 9.9 20.0 1.3 9.1 20.0 1.4 1 0 0 1 1 1 0 Fruit fly transformer protein Ndc80_HEC PF03801.13 NODE_27353_length_784_cov_65.510013_g21444_i0forward_frame_3 - 2.9 7.5 5.3 0.4 10.3 1.4 1.5 2 0 0 2 2 2 0 HEC/Ndc80p family Pkinase PF00069.25 NODE_27339_length_784_cov_145.168224_g21430_i0forward_frame_3 - 4.1e-12 46.0 0.2 6.1e-12 45.5 0.2 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_27339_length_784_cov_145.168224_g21430_i0forward_frame_3 - 1.9e-07 30.6 0.3 2.7e-07 30.2 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Rdx PF10262.9 NODE_27319_length_784_cov_9549.053405_g21013_i1forward_frame_3 - 6.9e-07 29.4 0.0 1.6e-06 28.2 0.0 1.6 1 0 0 1 1 1 1 Rdx family DUF5009 PF16401.5 NODE_27318_length_785_cov_2.213333_g21412_i0reverse_frame_3 - 0.091 12.2 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) Na_Ca_ex PF01699.24 NODE_27318_length_785_cov_2.213333_g21412_i0forward_frame_2 - 5.4e-15 55.7 16.4 5.4e-15 55.7 16.4 2.0 2 1 1 3 3 3 1 Sodium/calcium exchanger protein DUF986 PF06173.12 NODE_27318_length_785_cov_2.213333_g21412_i0forward_frame_2 - 0.97 9.5 5.6 0.14 12.2 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF986) DUF2101 PF09874.9 NODE_27318_length_785_cov_2.213333_g21412_i0forward_frame_2 - 1.8 8.2 6.4 0.26 11.0 1.7 1.9 1 1 0 1 1 1 0 Predicted membrane protein (DUF2101) Slx4 PF09494.10 NODE_27301_length_785_cov_294.212000_g21396_i0reverse_frame_3 - 2.8e-08 33.6 0.0 5e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 Slx4 endonuclease P3A PF08727.11 NODE_27301_length_785_cov_294.212000_g21396_i0reverse_frame_3 - 0.057 12.8 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 Poliovirus 3A protein like DUF3890 PF13029.6 NODE_27301_length_785_cov_294.212000_g21396_i0reverse_frame_3 - 0.18 12.2 0.2 0.32 11.5 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3890) NAM-associated PF14303.6 NODE_27301_length_785_cov_294.212000_g21396_i0reverse_frame_3 - 0.34 11.6 13.7 0.54 11.0 13.7 1.3 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain Ndc1_Nup PF09531.10 NODE_27301_length_785_cov_294.212000_g21396_i0reverse_frame_3 - 6.5 5.3 9.7 7.3 5.1 9.7 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF2688 PF10892.8 NODE_27301_length_785_cov_294.212000_g21396_i0forward_frame_3 - 0.075 12.5 0.2 0.14 11.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) DUF3149 PF11346.8 NODE_27301_length_785_cov_294.212000_g21396_i0forward_frame_2 - 0.13 11.9 0.9 0.28 10.8 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) RCC1 PF00415.18 NODE_27280_length_786_cov_2.182423_g21385_i0forward_frame_2 - 2.6e-15 56.8 0.2 4.4e-07 30.4 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_27280_length_786_cov_2.182423_g21385_i0forward_frame_2 - 7e-07 28.9 5.7 2.8e-05 23.8 0.3 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF1749 PF08538.10 ORF98232 - 7.4e-19 67.9 0.0 9.6e-19 67.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1749) AAA_16 PF13191.6 ORF98232 - 1.2e-05 25.8 0.3 0.00076 19.9 0.0 2.8 2 2 1 3 3 3 1 AAA ATPase domain Zeta_toxin PF06414.12 ORF98232 - 1.4e-05 24.5 0.0 2.2e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 ORF98232 - 0.00019 21.6 0.0 0.0012 19.0 0.0 2.0 2 0 0 2 2 2 1 AAA domain CPT PF07931.12 ORF98232 - 0.0021 17.9 0.0 0.0048 16.8 0.0 1.6 2 0 0 2 2 2 1 Chloramphenicol phosphotransferase-like protein ABC_tran PF00005.27 ORF98232 - 0.0045 17.5 0.0 0.0075 16.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_5 PF07728.14 ORF98232 - 0.0048 16.9 0.0 0.009 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF98232 - 0.011 16.3 0.0 0.022 15.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain Torsin PF06309.11 ORF98232 - 0.035 14.2 0.0 0.077 13.1 0.0 1.6 1 0 0 1 1 1 0 Torsin 6PF2K PF01591.18 ORF98232 - 0.08 12.2 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase KTI12 PF08433.10 ORF98232 - 0.091 12.2 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Peptidase_S9 PF00326.21 ORF98232 - 0.16 11.4 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Prolyl oligopeptidase family DUF2862 PF11061.8 ORF95913 - 0.076 12.9 0.2 0.23 11.3 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2862) SAM35 PF10806.8 ORF95913 - 3.9 7.7 9.0 0.47 10.7 3.4 2.3 2 1 0 2 2 2 0 SAM35, subunit of SAM coomplex tRNA-synt_1b PF00579.25 ORF95191 - 6.7e-06 25.6 0.0 9.9e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) MOSC PF03473.17 ORF93974 - 8.6e-21 74.3 0.0 1.4e-20 73.6 0.0 1.3 1 0 0 1 1 1 1 MOSC domain MOSC_N PF03476.16 ORF93974 - 4.7e-12 45.8 0.0 7.8e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain Shisa PF13908.6 ORF93132 - 0.023 15.0 1.0 0.049 13.9 0.0 1.8 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator TMEM154 PF15102.6 ORF93132 - 0.038 13.9 0.1 0.1 12.5 0.0 1.7 2 0 0 2 2 2 0 TMEM154 protein family RNA_pol_Rpb8 PF03870.15 ORF93132 - 0.042 14.0 0.0 0.069 13.3 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase Rpb8 Insulin_TMD PF17870.1 ORF93132 - 0.043 13.9 0.1 0.089 12.9 0.1 1.4 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment ATG27 PF09451.10 ORF93132 - 0.1 12.5 0.5 0.2 11.5 0.5 1.4 1 1 0 1 1 1 0 Autophagy-related protein 27 DUF2312 PF10073.9 ORF93132 - 0.14 11.9 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) ATP-sulfurylase PF01747.17 ORF90379 - 1.4e-59 201.1 0.0 1.6e-59 200.9 0.0 1.0 1 0 0 1 1 1 1 ATP-sulfurylase CTP_transf_like PF01467.26 ORF90379 - 0.074 13.2 0.0 0.14 12.4 0.0 1.6 1 1 0 1 1 1 0 Cytidylyltransferase-like TAL_FSA PF00923.19 ORF84172 - 2.4e-66 224.0 0.0 2.8e-66 223.8 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase LemA PF04011.12 ORF83563 - 0.019 14.8 1.0 0.031 14.1 1.0 1.2 1 0 0 1 1 1 0 LemA family Methyltransf_11 PF08241.12 ORF83529 - 6.8e-10 39.5 0.0 1e-09 38.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF83529 - 3.4e-09 37.3 0.0 5e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF83529 - 7e-08 32.4 0.0 9.6e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF83529 - 3.5e-05 24.4 0.0 5.6e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 ORF83529 - 0.044 13.8 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain NodZ PF05830.11 ORF83529 - 0.044 12.6 0.1 3.1 6.5 0.0 2.1 1 1 1 2 2 2 0 Nodulation protein Z (NodZ) cNMP_binding PF00027.29 ORF76955 - 1.1e-13 51.1 0.1 1.2e-10 41.3 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain PsaA_PsaB PF00223.19 ORF76423 - 1.4e-44 152.5 13.6 3.8e-35 121.3 5.3 3.0 1 1 1 2 2 2 2 Photosystem I psaA/psaB protein PIP5K PF01504.18 ORF75320 - 1e-05 24.9 0.0 1.4e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Rax2 PF12768.7 ORF74222 - 0.015 14.7 0.5 0.082 12.4 0.0 2.0 2 0 0 2 2 2 0 Cortical protein marker for cell polarity Podoplanin PF05808.11 ORF74222 - 0.028 14.5 0.4 0.075 13.1 0.4 1.7 1 1 0 1 1 1 0 Podoplanin Ribosomal_S8 PF00410.19 ORF74222 - 0.094 12.7 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein S8 zf-CCCH PF00642.24 ORF72636 - 8e-11 41.6 16.7 1.1e-08 34.7 1.6 3.2 3 0 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_3 PF15663.5 ORF72636 - 6.5e-05 23.1 0.9 0.22 11.7 0.1 2.4 2 0 0 2 2 2 2 Zinc-finger containing family RRM_1 PF00076.22 ORF72636 - 0.00014 21.7 0.0 0.00035 20.3 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Torus PF16131.5 ORF72636 - 0.01 16.5 10.2 0.12 13.1 0.1 2.8 3 1 0 3 3 3 0 Torus domain zf_CCCH_4 PF18345.1 ORF72636 - 0.017 15.2 3.9 0.017 15.2 3.9 3.1 3 0 0 3 3 3 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF72636 - 0.046 13.5 4.0 0.046 13.5 4.0 3.1 3 0 0 3 3 3 0 CCCH-type zinc finger Ribosomal_L23eN PF03939.13 ORF72636 - 0.12 12.7 1.6 0.23 11.7 1.6 1.4 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain Peptidase_C48 PF02902.19 ORF7182 - 0.17 11.7 0.3 30 4.3 0.0 3.0 2 1 1 3 3 3 0 Ulp1 protease family, C-terminal catalytic domain PTEN_C2 PF10409.9 ORF69504 - 0.045 13.5 0.2 0.078 12.7 0.2 1.4 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein DUF3035 PF11233.8 ORF69504 - 0.054 13.8 0.0 0.092 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) FDC-SP PF15215.6 ORF69504 - 0.16 12.6 0.4 0.42 11.2 0.4 1.7 1 0 0 1 1 1 0 Follicular dendritic cell secreted peptide Ribosomal_S5 PF00333.20 ORF69309 - 3.5e-26 91.0 2.4 7.1e-26 90.0 2.4 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 ORF69309 - 3.5e-25 87.2 0.1 7.4e-25 86.2 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S5, C-terminal domain DUF5320 PF17253.2 ORF69309 - 0.94 10.6 11.9 0.81 10.8 9.3 2.2 3 0 0 3 3 3 0 Family of unknown function (DUF5320) FoP_duplication PF13865.6 ORF69309 - 2.8 8.6 16.9 5.2 7.7 16.9 1.4 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 Arch_fla_DE PF04659.13 ORF62881 - 0.0045 16.8 0.1 0.0091 15.8 0.1 1.6 1 0 0 1 1 1 1 Archaeal flagella protein HXXEE PF13787.6 ORF62881 - 0.0052 17.6 1.5 0.0099 16.7 1.5 1.4 1 0 0 1 1 1 1 Protein of unknown function with HXXEE motif DUF2207 PF09972.9 ORF62881 - 0.01 14.6 1.0 0.013 14.2 1.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CmcI PF04989.12 ORF62881 - 0.056 13.1 1.4 0.078 12.7 0.6 1.5 2 0 0 2 2 2 0 Cephalosporin hydroxylase putAbiC PF16872.5 ORF62881 - 0.28 11.9 0.0 0.28 11.9 0.0 2.3 3 0 0 3 3 3 0 Putative phage abortive infection protein AAA_3 PF07726.11 ORF6267 - 0.047 13.6 0.1 6.5 6.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF3991 PF13154.6 ORF60169 - 0.076 13.4 0.0 0.15 12.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3991) Erf4 PF10256.9 ORF59255 - 0.0064 16.6 0.5 0.95 9.6 0.0 3.2 3 1 0 3 3 3 1 Golgin subfamily A member 7/ERF4 family AA_permease PF00324.21 ORF59255 - 0.014 14.0 0.4 0.019 13.6 0.4 1.1 1 0 0 1 1 1 0 Amino acid permease Lipoprotein_3 PF00938.17 ORF58441 - 0.13 12.5 0.1 8.2 6.7 0.0 2.6 2 1 0 2 2 2 0 Lipoprotein TFIIA PF03153.13 ORF58441 - 1.4 8.8 17.0 1.6 8.6 17.0 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DDA1 PF10172.9 ORF57423 - 0.15 12.3 3.3 4 7.8 0.1 3.0 2 1 1 3 3 3 0 Det1 complexing ubiquitin ligase C2 PF00168.30 ORF56826 - 7.4e-18 64.7 0.0 1.1e-17 64.3 0.0 1.2 1 0 0 1 1 1 1 C2 domain TgMIC1 PF11476.8 ORF56128 - 0.15 11.8 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 zf-MIZ PF02891.20 ORF55903 - 7.8e-17 60.8 2.5 1.7e-16 59.7 2.5 1.6 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger zf-Nse PF11789.8 ORF55903 - 0.00013 21.7 2.2 0.00029 20.6 0.9 2.1 2 0 0 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_2 PF13923.6 ORF55903 - 0.49 10.3 4.6 3.9 7.4 0.5 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF2207 PF09972.9 ORF55366 - 0.0031 16.4 0.1 0.0035 16.2 0.1 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) EI24 PF07264.11 ORF55366 - 0.012 15.9 0.0 0.014 15.7 0.0 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) YebO PF13974.6 ORF55366 - 8.8 6.5 6.5 7.7 6.7 0.9 3.2 2 1 1 3 3 3 0 YebO-like protein AAA_3 PF07726.11 ORF54773 - 0.047 13.6 0.1 6.5 6.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) zf-CCCH PF00642.24 ORF532 - 8e-11 41.6 16.7 1.1e-08 34.7 1.6 3.2 3 0 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_3 PF15663.5 ORF532 - 6.5e-05 23.1 0.9 0.22 11.7 0.1 2.4 2 0 0 2 2 2 2 Zinc-finger containing family RRM_1 PF00076.22 ORF532 - 0.00014 21.7 0.0 0.00035 20.3 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Torus PF16131.5 ORF532 - 0.01 16.5 10.2 0.12 13.1 0.1 2.8 3 1 0 3 3 3 0 Torus domain zf_CCCH_4 PF18345.1 ORF532 - 0.017 15.2 3.9 0.017 15.2 3.9 3.1 3 0 0 3 3 3 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF532 - 0.046 13.5 4.0 0.046 13.5 4.0 3.1 3 0 0 3 3 3 0 CCCH-type zinc finger Ribosomal_L23eN PF03939.13 ORF532 - 0.12 12.7 1.6 0.23 11.7 1.6 1.4 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain TPR_2 PF07719.17 ORF44685 - 3.9e-07 29.7 7.1 0.0031 17.5 0.5 3.9 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF44685 - 7.6e-06 25.5 4.2 0.061 13.0 0.1 3.9 5 0 0 5 5 5 2 TPR repeat TPR_12 PF13424.6 ORF44685 - 3e-05 24.2 2.2 0.03 14.6 0.2 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF44685 - 9.6e-05 22.8 2.5 0.17 12.4 0.2 3.1 2 2 0 2 2 2 2 Tetratricopeptide repeat Tropomyosin_1 PF12718.7 ORF44685 - 0.00095 19.3 1.8 0.00095 19.3 1.8 2.7 3 0 0 3 3 3 1 Tropomyosin like TPR_1 PF00515.28 ORF44685 - 0.00095 18.9 9.1 0.44 10.5 0.2 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF44685 - 0.0011 18.8 0.4 0.62 10.2 0.0 3.7 3 1 0 3 3 3 1 Tetratricopeptide repeat DUF3856 PF12968.7 ORF44685 - 0.0096 16.0 0.1 0.028 14.5 0.1 1.8 1 1 0 1 1 1 1 Domain of Unknown Function (DUF3856) TPR_16 PF13432.6 ORF44685 - 0.018 15.7 3.6 0.79 10.4 0.1 3.6 2 2 1 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF44685 - 0.021 15.6 2.2 1.8 9.6 0.3 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF44685 - 0.043 14.5 5.8 0.92 10.3 0.1 3.6 4 0 0 4 4 3 0 Tetratricopeptide repeat Ins_allergen_rp PF06757.13 ORF44685 - 0.049 13.6 1.0 0.29 11.1 0.1 2.7 3 1 0 3 3 3 0 Insect allergen related repeat, nitrile-specifier detoxification TPR_8 PF13181.6 ORF44685 - 0.052 13.8 6.1 0.65 10.3 0.6 3.9 3 1 0 3 3 3 0 Tetratricopeptide repeat YwqJ-deaminase PF14431.6 ORF44685 - 0.11 12.7 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 YwqJ-like deaminase FAM76 PF16046.5 ORF44685 - 0.26 10.6 2.3 0.38 10.1 2.3 1.3 1 0 0 1 1 1 0 FAM76 protein YabA PF06156.13 ORF44685 - 0.63 10.7 5.6 0.67 10.6 0.3 2.5 2 0 0 2 2 2 0 Initiation control protein YabA DUF4085 PF13315.6 ORF44685 - 0.91 9.1 4.6 0.17 11.5 0.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4085) zf-C4H2 PF10146.9 ORF44685 - 2 8.7 6.3 5.2 7.3 0.5 2.2 2 0 0 2 2 2 0 Zinc finger-containing protein CBM_20 PF00686.19 ORF43780 - 3.2e-14 52.6 0.1 6.3e-14 51.7 0.1 1.5 1 0 0 1 1 1 1 Starch binding domain AIRS_C PF02769.22 ORF43258 - 1e-21 77.7 0.0 1.3e-21 77.3 0.0 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF43258 - 0.16 12.7 0.0 0.32 11.7 0.0 1.6 1 0 0 1 1 1 0 AIR synthase related protein, N-terminal domain Galactosyl_T PF01762.21 ORF43153 - 6.8e-20 71.7 0.0 8.8e-20 71.3 0.0 1.1 1 0 0 1 1 1 1 Galactosyltransferase Peptidase_S8 PF00082.22 ORF4167 - 3.5e-22 79.0 6.6 4.5e-22 78.7 6.6 1.1 1 0 0 1 1 1 1 Subtilase family Sod_Fe_N PF00081.22 ORF37887 - 0.0068 16.9 2.2 0.0068 16.9 2.2 2.9 3 1 0 3 3 3 1 Iron/manganese superoxide dismutases, alpha-hairpin domain APG17 PF04108.12 ORF37887 - 0.0091 15.2 0.8 0.016 14.3 0.8 1.4 1 0 0 1 1 1 1 Autophagy protein Apg17 CBM9_1 PF06452.11 ORF37887 - 4.8 7.0 8.2 0.63 9.9 3.8 1.7 2 0 0 2 2 2 0 Carbohydrate family 9 binding domain-like PfkB PF00294.24 ORF32159 - 5.7e-22 78.4 2.1 6e-22 78.3 0.5 1.7 2 0 0 2 2 2 1 pfkB family carbohydrate kinase CTP_transf_like PF01467.26 ORF32159 - 7.4e-16 58.6 0.0 1.1e-15 58.1 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 ORF32159 - 0.033 14.1 0.0 0.054 13.4 0.0 1.4 1 0 0 1 1 1 0 FAD synthetase SPDY PF03771.16 ORF32159 - 0.1 12.5 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF317) Pantoate_ligase PF02569.15 ORF32159 - 0.13 11.5 0.1 0.2 10.8 0.1 1.2 1 0 0 1 1 1 0 Pantoate-beta-alanine ligase CemA PF03040.14 ORF24135 - 1.8 8.4 13.5 0.091 12.7 6.6 1.9 2 0 0 2 2 2 0 CemA family Ank_2 PF12796.7 ORF18508 - 8.6e-26 90.3 0.8 3.8e-12 46.6 0.1 3.5 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF18508 - 5e-20 69.5 1.8 0.00027 21.1 0.2 5.3 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF18508 - 4.2e-19 68.1 6.5 0.00053 20.3 0.1 5.4 5 0 0 5 5 5 4 Ankyrin repeat Ank_4 PF13637.6 ORF18508 - 1.6e-18 66.8 4.7 6.3e-06 26.6 0.0 3.8 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF18508 - 6.2e-16 58.3 9.7 6.7e-05 23.1 0.0 4.9 1 1 4 5 5 5 5 Ankyrin repeats (many copies) PPR_2 PF13041.6 ORF17362 - 3.5e-24 84.7 0.1 0.00014 22.0 0.0 5.9 2 2 4 6 6 6 6 PPR repeat family PPR PF01535.20 ORF17362 - 6.4e-15 54.3 5.4 0.0083 16.3 0.0 7.1 8 0 0 8 8 8 4 PPR repeat PPR_3 PF13812.6 ORF17362 - 2.6e-09 37.0 0.0 0.008 16.2 0.0 4.0 3 1 0 4 4 4 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF17362 - 2.7e-07 30.2 0.0 0.097 12.4 0.0 4.5 4 0 0 4 4 4 2 PPR repeat PPR_long PF17177.4 ORF17362 - 4.3e-05 23.0 0.0 1.1 8.6 0.0 3.2 1 1 2 3 3 3 2 Pentacotripeptide-repeat region of PRORP PHA_synth_III_E PF09712.10 ORF17362 - 0.025 13.7 0.4 0.065 12.3 0.1 1.8 1 1 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) ANAPC3 PF12895.7 ORF17362 - 0.14 12.4 0.5 2 8.7 0.0 2.6 3 0 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 TIM PF00121.18 ORF15047 - 1e-78 264.0 0.8 1.2e-78 263.8 0.8 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase AMPK1_CBM PF16561.5 ORF15047 - 0.018 15.2 0.4 0.039 14.2 0.4 1.6 1 0 0 1 1 1 0 Glycogen recognition site of AMP-activated protein kinase BPL_N PF09825.9 ORF13233 - 8.4e-13 48.1 0.1 1.9e-08 33.8 0.1 2.1 2 0 0 2 2 2 2 Biotin-protein ligase, N terminal DJ-1_PfpI PF01965.24 ORF13233 - 4.7e-06 26.5 0.0 8.1e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_5 PF13507.6 ORF13233 - 0.0057 15.8 0.0 0.74 8.9 0.0 2.1 2 0 0 2 2 2 2 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 ORF13233 - 0.03 13.9 0.0 0.046 13.3 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain NSP10 PF09401.10 ORF13233 - 0.047 13.7 0.0 0.082 13.0 0.0 1.3 1 0 0 1 1 1 0 RNA synthesis protein NSP10 LemA PF04011.12 ORF111010 - 0.019 14.8 1.0 0.031 14.1 1.0 1.2 1 0 0 1 1 1 0 LemA family zf-CCCH PF00642.24 ORF110761 - 8e-11 41.6 16.7 1.1e-08 34.7 1.6 3.2 3 0 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_3 PF15663.5 ORF110761 - 6.5e-05 23.1 0.9 0.22 11.7 0.1 2.4 2 0 0 2 2 2 2 Zinc-finger containing family RRM_1 PF00076.22 ORF110761 - 0.00014 21.7 0.0 0.00035 20.3 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Torus PF16131.5 ORF110761 - 0.01 16.5 10.2 0.12 13.1 0.1 2.8 3 1 0 3 3 3 0 Torus domain zf_CCCH_4 PF18345.1 ORF110761 - 0.017 15.2 3.9 0.017 15.2 3.9 3.1 3 0 0 3 3 3 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF110761 - 0.046 13.5 4.0 0.046 13.5 4.0 3.1 3 0 0 3 3 3 0 CCCH-type zinc finger Ribosomal_L23eN PF03939.13 ORF110761 - 0.12 12.7 1.6 0.23 11.7 1.6 1.4 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain zf-MIZ PF02891.20 ORF110317 - 7.8e-17 60.8 2.5 1.7e-16 59.7 2.5 1.6 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger zf-Nse PF11789.8 ORF110317 - 0.00013 21.7 2.2 0.00029 20.6 0.9 2.1 2 0 0 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_2 PF13923.6 ORF110317 - 0.49 10.3 4.6 3.9 7.4 0.5 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF2306 PF10067.9 ORF109978 - 0.0039 17.4 0.4 0.52 10.5 0.1 2.2 2 0 0 2 2 2 2 Predicted membrane protein (DUF2306) cNMP_binding PF00027.29 ORF108090 - 1.1e-13 51.1 0.1 1.2e-10 41.3 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain NIF PF03031.18 ORF105700 - 3.2e-06 27.0 3.8 4e-05 23.4 3.8 2.3 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase DUF1666 PF07891.12 ORF105700 - 0.08 12.6 2.8 0.34 10.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1666) TBCA PF02970.16 ORF105700 - 0.48 10.8 3.5 0.96 9.8 0.6 2.3 1 1 1 2 2 2 0 Tubulin binding cofactor A PLDc_2 PF13091.6 ORF105466 - 7.3e-29 100.3 0.6 1.2e-28 99.6 0.6 1.4 1 0 0 1 1 1 1 PLD-like domain FAM83 PF07894.12 ORF105466 - 2.2e-05 24.2 0.8 7.7e-05 22.4 0.8 1.8 1 1 0 1 1 1 1 FAM83 A-H PLDc PF00614.22 ORF105466 - 0.00079 19.5 0.7 0.0019 18.3 0.7 1.6 1 0 0 1 1 1 1 Phospholipase D Active site motif APOBEC_C PF05240.14 ORF105466 - 0.015 15.2 0.3 0.35 10.8 0.0 2.5 2 0 0 2 2 2 0 APOBEC-like C-terminal domain Abhydrolase_1 PF00561.20 ORF105183 - 8e-23 81.4 0.0 1.3e-22 80.7 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF105183 - 1.1e-14 54.3 0.0 1.5e-14 53.9 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF105183 - 6.3e-13 49.8 0.0 7.9e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 ORF105183 - 3.2e-05 22.8 0.0 4.7e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 Ndr family LIDHydrolase PF10230.9 ORF105183 - 0.00043 19.9 0.0 0.0006 19.4 0.0 1.2 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Esterase PF00756.20 ORF105183 - 0.00054 19.7 0.0 0.00082 19.1 0.0 1.3 1 0 0 1 1 1 1 Putative esterase Abhydrolase_5 PF12695.7 ORF105183 - 0.0012 18.7 0.0 0.0018 18.1 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF915 PF06028.11 ORF105183 - 0.0013 18.1 0.1 0.012 14.9 0.0 2.2 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) PGAP1 PF07819.13 ORF105183 - 0.0015 18.3 0.0 0.0028 17.4 0.0 1.4 1 0 0 1 1 1 1 PGAP1-like protein Chlorophyllase2 PF12740.7 ORF105183 - 0.0044 16.0 0.0 0.007 15.3 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_2 PF02230.16 ORF105183 - 0.014 15.2 0.0 0.26 11.1 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase UPF0227 PF05728.12 ORF105183 - 0.025 14.5 0.2 0.053 13.5 0.2 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0227) IpaB_EvcA PF03278.13 ORF105183 - 0.04 13.6 0.0 0.081 12.6 0.0 1.5 1 0 0 1 1 1 0 IpaB/EvcA family Ser_hydrolase PF06821.13 ORF105183 - 0.052 13.4 0.0 0.081 12.8 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase Abhydrolase_3 PF07859.13 ORF105183 - 0.1 12.4 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Lipase_3 PF01764.25 ORF105183 - 0.12 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) Methyltransf_11 PF08241.12 ORF104911 - 1.5e-11 44.8 0.0 2.6e-11 44.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF104911 - 8.6e-07 28.9 0.0 1.3e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF104911 - 9.7e-07 28.7 0.0 1.3e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF104911 - 1.3e-06 29.0 0.0 2.7e-06 28.0 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF104911 - 3.3e-06 27.8 0.0 5.3e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF104911 - 4.4e-06 26.2 0.0 6e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_29 PF03141.16 ORF104911 - 0.00021 20.0 0.0 0.00029 19.5 0.0 1.2 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_8 PF05148.15 ORF104911 - 0.0006 19.7 0.0 0.00086 19.2 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase WD40 PF00400.32 ORF104027 - 1.7e-12 47.6 12.0 1.4e-06 28.9 0.0 5.1 5 1 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF104027 - 2.5e-07 30.9 0.0 0.27 11.6 0.0 3.4 2 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Gmad1 PF10647.9 ORF104027 - 0.0035 17.1 0.1 0.088 12.5 0.0 2.1 2 0 0 2 2 2 1 Lipoprotein LpqB beta-propeller domain PDDEXK_1 PF12705.7 ORF103752 - 1.4e-07 31.7 0.0 1.9e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily AAA_3 PF07726.11 ORF102651 - 0.047 13.6 0.1 6.5 6.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) MOSC PF03473.17 ORF100540 - 8.6e-21 74.3 0.0 1.4e-20 73.6 0.0 1.3 1 0 0 1 1 1 1 MOSC domain MOSC_N PF03476.16 ORF100540 - 4.7e-12 45.8 0.0 7.8e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain Polysacc_synt_C PF14667.6 NODE_27607_length_778_cov_71.668910_g21673_i0forward_frame_1 - 0.2 11.7 19.7 0.12 12.5 1.5 3.5 3 1 1 4 4 4 0 Polysaccharide biosynthesis C-terminal domain Shisa PF13908.6 NODE_27607_length_778_cov_71.668910_g21673_i0forward_frame_1 - 1.5 9.0 4.3 0.51 10.6 0.2 2.1 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator mTERF PF02536.14 NODE_27582_length_778_cov_289.558546_g21650_i0reverse_frame_1 - 3.2e-35 121.6 0.0 5.2e-35 120.9 0.0 1.2 1 0 0 1 1 1 1 mTERF DUF1127 PF06568.11 NODE_27582_length_778_cov_289.558546_g21650_i0reverse_frame_1 - 9.5e-06 25.2 0.0 9 6.1 0.0 4.3 4 0 0 4 4 4 3 Domain of unknown function (DUF1127) I-set PF07679.16 NODE_27582_length_778_cov_289.558546_g21650_i0reverse_frame_1 - 0.00021 21.3 0.1 4.9 7.3 0.0 4.0 1 1 3 4 4 4 1 Immunoglobulin I-set domain DUF4743 PF15916.5 NODE_27582_length_778_cov_289.558546_g21650_i0reverse_frame_1 - 0.0078 16.2 0.1 0.52 10.3 0.0 2.6 2 1 1 3 3 3 1 Domain of unknown function (DUF4743) HHH_4 PF14490.6 NODE_27582_length_778_cov_289.558546_g21650_i0reverse_frame_1 - 0.028 14.4 0.0 23 5.0 0.0 3.7 4 0 0 4 4 4 0 Helix-hairpin-helix containing domain Inhibitor_I69 PF13734.6 NODE_27582_length_778_cov_289.558546_g21650_i0reverse_frame_1 - 0.052 14.0 0.0 81 3.7 0.0 3.5 3 0 0 3 3 3 0 Spi protease inhibitor Peptidase_M43 PF05572.13 NODE_27582_length_778_cov_289.558546_g21650_i0reverse_frame_1 - 0.067 13.1 0.0 1.3e+02 2.5 0.0 3.8 1 1 2 4 4 4 0 Pregnancy-associated plasma protein-A zf-RING_6 PF14835.6 NODE_27582_length_778_cov_289.558546_g21650_i0reverse_frame_1 - 0.098 12.5 0.1 99 2.9 0.0 4.0 3 1 1 4 4 4 0 zf-RING of BARD1-type protein Cys_rich_CPXG PF14255.6 NODE_27582_length_778_cov_289.558546_g21650_i0forward_frame_1 - 0.73 9.8 18.6 1 9.3 0.3 4.6 5 0 0 5 5 5 0 Cysteine-rich CPXCG Asp PF00026.23 NODE_27577_length_778_cov_395.966353_g21646_i0reverse_frame_1 - 1.9e-29 103.1 1.3 2.4e-29 102.8 1.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_27577_length_778_cov_395.966353_g21646_i0reverse_frame_1 - 3.4e-05 24.2 0.4 0.00017 21.9 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal PspB PF06667.12 NODE_27564_length_779_cov_75.052419_g21634_i0reverse_frame_1 - 0.14 12.2 0.2 0.31 11.1 0.2 1.5 1 0 0 1 1 1 0 Phage shock protein B SecG PF03840.14 NODE_27564_length_779_cov_75.052419_g21634_i0forward_frame_1 - 0.13 12.4 0.1 0.24 11.5 0.1 1.5 1 0 0 1 1 1 0 Preprotein translocase SecG subunit MyTH4 PF00784.17 NODE_27550_length_779_cov_181.438172_g21621_i0reverse_frame_1 - 0.16 12.5 10.1 7.3 7.1 0.1 3.9 4 0 0 4 4 4 0 MyTH4 domain RCC1_2 PF13540.6 NODE_27550_length_779_cov_181.438172_g21621_i0forward_frame_1 - 1.4e-06 28.0 7.7 0.19 11.6 0.1 4.5 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Yuri_gagarin PF15934.5 NODE_27550_length_779_cov_181.438172_g21621_i0forward_frame_1 - 0.053 13.4 0.1 0.13 12.1 0.0 1.5 2 0 0 2 2 2 0 Yuri gagarin Bmt2 PF11968.8 NODE_27522_length_780_cov_86.531544_g21597_i0forward_frame_1 - 2.9e-07 30.6 0.0 1e-05 25.5 0.0 2.2 1 1 0 1 1 1 1 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 Methyltransf_12 PF08242.12 NODE_27522_length_780_cov_86.531544_g21597_i0forward_frame_1 - 0.041 14.6 0.0 0.074 13.8 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_27522_length_780_cov_86.531544_g21597_i0forward_frame_1 - 0.14 12.9 0.0 0.25 12.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_27522_length_780_cov_86.531544_g21597_i0forward_frame_1 - 0.15 12.7 0.0 0.3 11.8 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain zf-B_box PF00643.24 NODE_27517_length_780_cov_96.715436_g21592_i0reverse_frame_1 - 0.0071 16.5 4.6 0.0071 16.5 4.6 2.1 2 1 0 2 2 2 1 B-box zinc finger PHD PF00628.29 NODE_27517_length_780_cov_96.715436_g21592_i0reverse_frame_1 - 0.058 13.3 3.1 0.13 12.2 3.1 1.7 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 NODE_27517_length_780_cov_96.715436_g21592_i0reverse_frame_1 - 0.067 13.1 4.4 0.15 12.0 4.4 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF5043 PF16446.5 NODE_27517_length_780_cov_96.715436_g21592_i0reverse_frame_1 - 0.28 11.2 7.4 0.57 10.1 1.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5043) Arg_decarbox_C PF17944.1 NODE_27517_length_780_cov_96.715436_g21592_i0reverse_frame_1 - 2.6 8.7 5.3 9.3 6.9 1.3 3.2 3 1 1 4 4 4 0 Arginine decarboxylase C-terminal helical extension DMAP1_like PF17024.5 NODE_27499_length_780_cov_322.554362_g21574_i0reverse_frame_1 - 0.031 14.4 1.1 0.93 9.6 0.2 2.3 2 0 0 2 2 2 0 Putative DMAP1-like Cass2 PF14526.6 NODE_27499_length_780_cov_322.554362_g21574_i0forward_frame_1 - 0.07 13.3 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Integron-associated effector binding protein GFO_IDH_MocA_C PF02894.17 NODE_27486_length_781_cov_3.063003_g21563_i0reverse_frame_3 - 3.4e-20 72.2 0.0 5.4e-20 71.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain GFO_IDH_MocA PF01408.22 NODE_27486_length_781_cov_3.063003_g21563_i0reverse_frame_3 - 1.1e-11 45.6 0.0 1.8e-11 44.9 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold AAA_33 PF13671.6 NODE_27486_length_781_cov_3.063003_g21563_i0reverse_frame_3 - 0.097 12.8 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain PROCN PF08083.11 NODE_27468_length_781_cov_134.608579_g21545_i0forward_frame_2 - 3.5e-140 467.3 7.1 4.5e-140 466.9 7.1 1.0 1 0 0 1 1 1 1 PROCN (NUC071) domain SNX17_FERM_C PF18116.1 NODE_27457_length_781_cov_356.660858_g21021_i1reverse_frame_2 - 0.014 15.5 1.7 0.014 15.5 1.7 2.0 1 1 1 2 2 2 0 Sorting Nexin 17 FERM C-terminal domain ABC2_membrane_3 PF12698.7 NODE_27445_length_782_cov_2.511379_g21527_i0reverse_frame_2 - 2.3e-06 27.0 0.0 3e-06 26.6 0.0 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein BCMA-Tall_bind PF09257.10 NODE_27445_length_782_cov_2.511379_g21527_i0forward_frame_2 - 0.12 12.5 3.4 0.24 11.5 3.4 1.5 1 0 0 1 1 1 0 BCMA, TALL-1 binding # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks66.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks66.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks66.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks66.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Glu_synthase PF01645.17 NODE_27442_length_782_cov_3.433735_g21524_i0forward_frame_2 - 3.3e-124 414.8 0.1 3.6e-124 414.6 0.1 1.0 1 0 0 1 1 1 1 Conserved region in glutamate synthase FMN_dh PF01070.18 NODE_27442_length_782_cov_3.433735_g21524_i0forward_frame_2 - 2.3e-06 26.9 0.7 7.1e-06 25.3 0.4 1.7 2 0 0 2 2 2 1 FMN-dependent dehydrogenase EMC3_TMCO1 PF01956.16 NODE_27404_length_783_cov_7.624332_g21489_i0reverse_frame_3 - 0.095 12.4 0.1 0.095 12.4 0.1 1.9 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Forkhead PF00250.18 NODE_27378_length_783_cov_274.050802_g21465_i0reverse_frame_3 - 0.0047 17.1 1.0 0.0047 17.1 1.0 2.1 2 0 0 2 2 2 1 Forkhead domain Forkhead PF00250.18 NODE_27377_length_783_cov_278.193850_g21464_i0forward_frame_3 - 0.0015 18.7 1.0 0.0047 17.1 1.0 1.9 1 0 0 1 1 1 1 Forkhead domain Forkhead PF00250.18 NODE_27376_length_783_cov_315.803476_g21463_i0forward_frame_3 - 0.0027 17.9 0.5 0.0055 16.9 0.5 1.6 1 0 0 1 1 1 1 Forkhead domain MMACHC PF16690.5 ORF9966 - 1.7e-23 83.5 0.0 2.8e-23 82.7 0.0 1.3 1 1 0 1 1 1 1 Methylmalonic aciduria and homocystinuria type C family tRNA_anti-codon PF01336.25 ORF98800 - 6.2e-10 38.9 0.0 8.9e-10 38.4 0.0 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 ORF98800 - 0.00012 22.2 0.0 0.0002 21.5 0.0 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain U79_P34 PF03064.16 ORF98800 - 0.056 12.8 5.7 0.071 12.4 5.7 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 FAP PF07174.11 ORF98800 - 0.51 9.8 9.6 0.77 9.2 9.6 1.2 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DUF5427 PF10310.9 ORF98800 - 0.95 8.3 11.3 1.4 7.8 11.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5427) SRP-alpha_N PF04086.13 ORF98800 - 1.1 9.1 12.6 1.5 8.6 12.6 1.3 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Ndc1_Nup PF09531.10 ORF98800 - 1.7 7.2 5.1 1.9 7.1 5.1 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Presenilin PF01080.17 ORF98800 - 4.3 6.0 5.0 4.6 5.9 5.0 1.1 1 0 0 1 1 1 0 Presenilin RR_TM4-6 PF06459.12 ORF98800 - 6.1 6.6 12.9 8.5 6.1 12.9 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CRAL_TRIO PF00650.20 ORF97593 - 4.9e-36 123.8 0.2 8.5e-36 123.1 0.2 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF97593 - 2.8e-05 24.2 0.3 2.8e-05 24.2 0.3 1.8 2 0 0 2 2 2 1 CRAL/TRIO, N-terminal domain CRAL_TRIO_2 PF13716.6 ORF97593 - 0.02 15.1 0.8 0.065 13.4 0.8 2.0 1 1 0 1 1 1 0 Divergent CRAL/TRIO domain RIH_assoc PF08454.11 ORF95720 - 0.0015 18.4 2.0 0.0022 17.8 0.5 2.1 2 1 0 2 2 2 1 RyR and IP3R Homology associated DUF3926 PF13080.6 ORF95720 - 0.19 11.7 0.1 0.19 11.7 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3926) Pkinase PF00069.25 ORF95435 - 1.9e-46 158.6 0.0 2.3e-46 158.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95435 - 1.1e-30 106.8 0.0 1.3e-30 106.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF95435 - 1.1e-07 31.5 0.0 2.1e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF95435 - 0.00022 20.1 0.0 0.00033 19.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF95435 - 0.025 13.5 0.1 0.029 13.3 0.1 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 ORF95435 - 0.043 13.1 0.0 0.07 12.5 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family MORN PF02493.20 ORF95267 - 1.3e-67 219.8 84.9 3.6e-09 36.0 2.0 10.1 10 0 0 10 10 10 10 MORN repeat PCNA_C PF02747.15 ORF93931 - 5.8e-42 142.9 0.0 8.8e-38 129.4 0.0 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 ORF93931 - 3.2e-39 133.6 1.9 5.4e-39 132.8 1.9 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF93931 - 0.00021 20.8 0.1 0.00028 20.4 0.1 1.2 1 0 0 1 1 1 1 Rad9 NAD_binding_4 PF07993.12 ORF93931 - 0.18 11.0 0.0 0.81 8.8 0.0 1.8 1 1 0 2 2 2 0 Male sterility protein tRNA-synt_1d PF00750.19 ORF92262 - 2.4e-66 224.1 0.0 2.9e-66 223.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 ORF92262 - 9.2e-05 23.0 0.0 0.00027 21.5 0.0 1.8 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF92262 - 0.0038 16.6 0.0 0.0051 16.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain Rotamase_2 PF13145.6 ORF92262 - 0.0061 17.4 0.1 0.49 11.2 0.1 2.1 2 0 0 2 2 2 1 PPIC-type PPIASE domain DUF4298 PF14131.6 ORF92262 - 0.043 13.8 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) DUF2380 PF09533.10 ORF85854 - 0.034 13.8 0.4 0.049 13.2 0.4 1.2 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) UCH PF00443.29 ORF8412 - 1.9e-25 89.9 0.0 1.9e-25 89.9 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF8412 - 1.5e-06 28.1 0.0 1.8e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Lipase_3 PF01764.25 ORF83273 - 3.3e-12 46.5 0.0 4.5e-12 46.0 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF83273 - 0.069 13.7 2.2 0.1 13.2 2.1 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF3089 PF11288.8 ORF83273 - 0.073 12.6 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) Hydrolase_4 PF12146.8 ORF82659 - 1.4e-10 40.8 0.0 4.9e-07 29.3 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF82659 - 2.2e-08 33.9 0.0 5.8e-07 29.2 0.0 2.1 2 0 0 2 2 2 1 Prolyl oligopeptidase family DUF818 PF05677.12 ORF82659 - 2e-05 23.7 0.0 2.8e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Abhydrolase_1 PF00561.20 ORF82659 - 0.00018 21.3 0.0 0.084 12.5 0.0 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold DLH PF01738.18 ORF82659 - 0.00035 20.2 0.0 0.00046 19.8 0.0 1.3 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_6 PF12697.7 ORF82659 - 0.00054 20.6 0.1 0.027 15.1 0.0 2.1 1 1 1 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 ORF82659 - 0.0017 18.2 0.0 0.0072 16.1 0.0 1.9 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase LIP PF03583.14 ORF82659 - 0.0055 16.1 0.0 0.0088 15.4 0.0 1.3 1 0 0 1 1 1 1 Secretory lipase Asp2 PF16929.5 ORF82659 - 0.052 12.5 0.0 0.072 12.1 0.0 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter tRNA-synt_1d PF00750.19 ORF75429 - 2.4e-66 224.1 0.0 2.9e-66 223.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 ORF75429 - 9.2e-05 23.0 0.0 0.00027 21.5 0.0 1.8 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF75429 - 0.0038 16.6 0.0 0.0051 16.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain Rotamase_2 PF13145.6 ORF75429 - 0.0061 17.4 0.1 0.49 11.2 0.1 2.1 2 0 0 2 2 2 1 PPIC-type PPIASE domain DUF4298 PF14131.6 ORF75429 - 0.043 13.8 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Calmodulin_bind PF07887.11 ORF74755 - 0.17 11.1 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 Calmodulin binding protein-like Toxin_22 PF08092.11 ORF73266 - 2.2 8.4 6.1 7.7 6.7 0.3 2.6 2 0 0 2 2 2 0 Magi peptide toxin family COesterase PF00135.28 ORF71812 - 0.048 12.5 1.2 0.062 12.2 1.2 1.1 1 0 0 1 1 1 0 Carboxylesterase family Vps39_1 PF10366.9 ORF71812 - 0.4 11.0 6.5 0.5 10.7 0.5 2.4 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 1 Pkinase PF00069.25 ORF71003 - 3.3e-55 187.3 0.0 4.2e-55 187.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF71003 - 4.7e-28 98.2 0.0 6e-28 97.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF71003 - 8.4e-06 25.0 0.3 1.3e-05 24.3 0.3 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF71003 - 3.2e-05 23.4 0.0 4.1e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF71003 - 0.055 12.8 0.2 0.099 12.0 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF71003 - 0.21 11.5 0.3 0.32 10.9 0.3 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family SpoVS PF04232.12 ORF70582 - 8.7e-08 31.8 0.0 8e-05 22.3 0.0 2.3 2 0 0 2 2 2 2 Stage V sporulation protein S (SpoVS) DUF2070 PF09843.9 ORF66885 - 0.22 9.8 9.8 0.28 9.4 9.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Glyco_hydro_18 PF00704.28 ORF64807 - 4.9e-11 42.9 1.9 2.5e-10 40.6 1.9 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 18 TPK_catalytic PF04263.16 ORF63805 - 4.9e-26 91.1 0.0 6.3e-26 90.8 0.0 1.1 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, catalytic domain TPK_B1_binding PF04265.14 ORF63805 - 6.3e-14 51.4 0.0 1.4e-13 50.4 0.0 1.5 2 0 0 2 2 2 1 Thiamin pyrophosphokinase, vitamin B1 binding domain NAD_binding_10 PF13460.6 ORF63805 - 0.058 13.3 0.1 0.15 11.9 0.0 1.7 2 0 0 2 2 2 0 NAD(P)H-binding Sigma54_activat PF00158.26 ORF62682 - 1.4e-50 171.3 0.0 1.9e-50 170.8 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 ORF62682 - 3.2e-09 37.0 0.0 5.3e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 ORF62682 - 4.4e-05 23.2 0.9 4.4e-05 23.2 0.9 2.9 3 1 0 3 3 3 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 ORF62682 - 0.0074 16.3 0.0 0.014 15.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) HTH_50 PF18024.1 ORF62682 - 0.03 13.9 0.6 0.074 12.7 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 ORF62682 - 0.19 11.3 1.1 0.61 9.7 0.1 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_30 PF13556.6 ORF62682 - 0.41 10.5 2.3 0.44 10.4 0.0 2.2 3 0 0 3 3 3 0 PucR C-terminal helix-turn-helix domain MlaE PF02405.16 ORF62259 - 7.3e-73 244.7 17.4 8.8e-73 244.5 17.4 1.1 1 0 0 1 1 1 1 Permease MlaE DAHP_synth_1 PF00793.20 ORF61543 - 2.4e-64 216.9 0.0 2.6e-64 216.7 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family DUF5488 PF17590.2 ORF5991 - 0.37 10.6 2.6 0.95 9.2 0.2 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5488) SAM_adeno_trans PF01887.16 ORF58272 - 5.8e-67 225.6 0.0 6.5e-67 225.4 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase ABC_tran PF00005.27 ORF58184 - 2e-33 115.8 0.1 3e-33 115.3 0.1 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF58184 - 1.1e-09 38.0 1.0 2.2e-07 30.5 1.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF58184 - 3.3e-05 24.2 0.0 0.0017 18.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF58184 - 0.00011 22.0 0.1 0.0002 21.2 0.1 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF58184 - 0.00013 22.4 0.3 0.00047 20.6 0.2 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 ORF58184 - 0.00023 20.8 0.0 0.00053 19.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF815 PF05673.13 ORF58184 - 0.00038 19.7 0.0 0.00059 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) DUF87 PF01935.17 ORF58184 - 0.00088 19.4 0.1 0.0053 16.9 0.0 2.1 2 1 0 2 2 2 1 Helicase HerA, central domain AAA_18 PF13238.6 ORF58184 - 0.0016 19.0 0.3 0.019 15.5 0.3 2.4 1 1 0 1 1 1 1 AAA domain G-alpha PF00503.20 ORF58184 - 0.0018 17.5 0.0 0.0019 17.4 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF58184 - 0.002 18.3 0.6 0.035 14.3 0.6 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_5 PF07728.14 ORF58184 - 0.0053 16.8 0.0 0.099 12.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.18 ORF58184 - 0.0099 15.3 0.0 0.018 14.4 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family Rad17 PF03215.15 ORF58184 - 0.018 15.0 0.0 0.2 11.6 0.0 2.1 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_7 PF12775.7 ORF58184 - 0.018 14.5 0.0 0.032 13.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_21 PF13304.6 ORF58184 - 0.021 14.6 0.0 0.12 12.1 0.0 2.1 2 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 ORF58184 - 0.028 14.8 0.2 2.7 8.4 0.2 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 ORF58184 - 0.029 14.3 0.0 0.083 12.8 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase NTPase_1 PF03266.15 ORF58184 - 0.035 14.0 0.2 1.3 8.9 0.0 2.2 2 0 0 2 2 2 0 NTPase IstB_IS21 PF01695.17 ORF58184 - 0.046 13.4 0.3 10 5.8 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_23 PF13476.6 ORF58184 - 0.054 14.0 0.4 0.4 11.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 ORF58184 - 0.058 13.1 0.0 0.2 11.4 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_30 PF13604.6 ORF58184 - 0.062 13.0 0.0 0.97 9.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF58184 - 0.076 12.5 0.2 0.3 10.5 0.1 1.8 1 1 1 2 2 2 0 Poxvirus A32 protein NACHT PF05729.12 ORF58184 - 0.098 12.6 0.1 0.8 9.6 0.0 2.1 2 0 0 2 2 2 0 NACHT domain HAD PF12710.7 ORF57631 - 4.4e-15 56.6 0.0 6.3e-15 56.1 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF57631 - 1.1e-12 48.7 0.1 2e-12 47.9 0.1 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 ORF57631 - 5.4e-09 35.8 0.0 1e-08 34.9 0.0 1.3 1 1 0 1 1 1 1 Putative Phosphatase Acid_phosphat_B PF03767.14 ORF57631 - 8.4e-05 22.3 0.1 0.0095 15.5 0.0 2.2 2 0 0 2 2 2 2 HAD superfamily, subfamily IIIB (Acid phosphatase) Hydrolase_3 PF08282.12 ORF57631 - 0.086 12.6 0.0 0.48 10.1 0.0 2.3 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase PFK PF00365.20 ORF57631 - 0.12 11.6 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Phosphofructokinase ECM11 PF15463.6 ORF57445 - 0.061 13.9 0.6 0.099 13.2 0.6 1.4 1 0 0 1 1 1 0 Extracellular mutant protein 11 ECR1_N PF14382.6 ORF56205 - 0.23 11.3 0.0 0.83 9.5 0.0 1.8 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region NAD_kinase PF01513.21 ORF54582 - 2.7e-15 56.3 0.0 3.1e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 ORF54582 - 0.02 14.5 0.0 0.035 13.7 0.0 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain Dermcidin PF15291.6 ORF52040 - 0.014 15.9 0.1 0.037 14.6 0.1 1.7 1 0 0 1 1 1 0 Dermcidin, antibiotic peptide DUF711 PF05167.12 ORF52040 - 0.21 10.5 0.2 0.31 9.9 0.2 1.4 1 1 0 1 1 1 0 Uncharacterised ACR (DUF711) Ank_2 PF12796.7 ORF51145 - 3.6e-11 43.5 0.6 0.00016 22.2 0.1 3.4 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF51145 - 4.9e-10 38.8 3.1 1.1 10.1 0.0 5.6 6 0 0 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF51145 - 2.6e-08 34.2 3.3 0.31 11.7 0.2 5.5 3 1 3 6 6 6 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF51145 - 2.4e-06 27.7 4.8 2.6 8.6 0.0 5.3 4 1 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF51145 - 0.00014 22.0 7.5 5.3 7.5 0.0 5.1 4 2 1 5 5 5 3 Ankyrin repeats (many copies) Glyco_transf_4 PF13439.6 ORF50412 - 8.5e-12 45.4 0.1 1.3e-11 44.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 ORF50412 - 1.1e-09 39.0 0.7 1.7e-09 38.3 0.7 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 ORF50412 - 2.7e-07 30.7 0.0 4.2e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like Laminin_B PF00052.18 ORF49575 - 1.3e-05 25.1 0.0 2.2e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Laminin B (Domain IV) CcdA PF07362.12 ORF47298 - 0.013 15.9 0.0 0.65 10.5 0.0 2.5 2 0 0 2 2 2 0 Post-segregation antitoxin CcdA tRNA-synt_1d PF00750.19 ORF47134 - 2.4e-66 224.1 0.0 2.9e-66 223.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 ORF47134 - 9.2e-05 23.0 0.0 0.00027 21.5 0.0 1.8 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF47134 - 0.0038 16.6 0.0 0.0051 16.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain Rotamase_2 PF13145.6 ORF47134 - 0.0061 17.4 0.1 0.49 11.2 0.1 2.1 2 0 0 2 2 2 1 PPIC-type PPIASE domain DUF4298 PF14131.6 ORF47134 - 0.043 13.8 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) PMSR PF01625.21 ORF45302 - 2.2e-58 196.8 0.4 3.4e-58 196.2 0.4 1.3 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase DUF3141 PF11339.8 ORF42913 - 0.1 11.0 0.0 0.13 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3141) DUF2341 PF10102.9 ORF38472 - 0.068 13.8 0.8 0.21 12.2 0.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF2341) PCNA_C PF02747.15 ORF38225 - 5.8e-42 142.9 0.0 8.8e-38 129.4 0.0 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 ORF38225 - 3.2e-39 133.6 1.9 5.4e-39 132.8 1.9 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF38225 - 0.00021 20.8 0.1 0.00028 20.4 0.1 1.2 1 0 0 1 1 1 1 Rad9 NAD_binding_4 PF07993.12 ORF38225 - 0.18 11.0 0.0 0.81 8.8 0.0 1.8 1 1 0 2 2 2 0 Male sterility protein Lipase_3 PF01764.25 ORF38126 - 3.3e-12 46.5 0.0 4.5e-12 46.0 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF38126 - 0.069 13.7 2.2 0.1 13.2 2.1 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF3089 PF11288.8 ORF38126 - 0.073 12.6 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) DUF2203 PF09969.9 ORF35106 - 0.083 13.6 0.8 0.083 13.6 0.8 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) PMSR PF01625.21 ORF33936 - 2.2e-58 196.8 0.4 3.4e-58 196.2 0.4 1.3 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase DUF733 PF05306.11 ORF29997 - 7.2 7.0 9.0 2 8.8 1.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF733) ECH_1 PF00378.20 ORF29632 - 4.7e-45 153.9 0.0 5.4e-45 153.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF29632 - 5.7e-33 114.8 0.0 6.7e-33 114.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 ORF29632 - 0.098 12.6 0.3 0.22 11.5 0.3 1.5 1 0 0 1 1 1 0 Peptidase family S49 PCNA_C PF02747.15 ORF28529 - 3.6e-42 143.5 0.0 5.5e-38 130.0 0.0 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 ORF28529 - 3.1e-39 133.6 1.9 5.4e-39 132.8 1.9 1.3 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF28529 - 0.00021 20.8 0.1 0.00028 20.4 0.1 1.2 1 0 0 1 1 1 1 Rad9 NAD_binding_4 PF07993.12 ORF28529 - 0.18 11.0 0.0 0.81 8.8 0.0 1.8 1 1 0 2 2 2 0 Male sterility protein U-box PF04564.15 ORF28219 - 3.8e-09 36.6 1.3 1.6e-08 34.6 0.0 2.3 2 0 0 2 2 2 1 U-box domain BRE1 PF08647.11 ORF28219 - 0.001 19.1 11.9 0.001 19.1 11.9 2.4 2 0 0 2 2 2 1 BRE1 E3 ubiquitin ligase Jnk-SapK_ap_N PF09744.9 ORF28219 - 0.0011 19.2 10.2 0.0011 19.2 10.2 2.2 1 1 0 2 2 2 1 JNK_SAPK-associated protein-1 Prefoldin_2 PF01920.20 ORF28219 - 0.0049 16.8 1.2 0.0049 16.8 1.2 3.2 2 2 1 3 3 3 2 Prefoldin subunit Atg14 PF10186.9 ORF28219 - 0.0057 15.8 17.6 0.011 14.9 17.4 1.5 1 1 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 ADIP PF11559.8 ORF28219 - 0.0099 16.0 12.4 0.0099 16.0 12.4 2.1 2 0 0 2 2 2 1 Afadin- and alpha -actinin-Binding Myosin_tail_1 PF01576.19 ORF28219 - 0.014 13.3 18.6 0.032 12.1 18.6 1.5 1 1 0 1 1 1 0 Myosin tail FliJ PF02050.16 ORF28219 - 0.021 15.1 4.8 0.021 15.1 4.8 2.0 2 0 0 2 2 2 0 Flagellar FliJ protein T3SS_NleG PF06416.12 ORF28219 - 0.031 14.2 4.1 0.056 13.4 0.3 2.8 1 1 1 2 2 2 0 Effector protein NleG CENP-Q PF13094.6 ORF28219 - 0.045 13.9 10.3 0.072 13.3 10.2 1.5 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF4953 PF16313.5 ORF28219 - 0.073 12.3 1.4 1.1 8.4 0.8 2.2 2 0 0 2 2 2 0 Met-zincin Baculo_PEP_C PF04513.12 ORF28219 - 0.08 13.0 12.0 0.15 12.1 9.2 2.5 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF812 PF05667.11 ORF28219 - 0.084 11.7 14.6 0.12 11.2 14.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) HrpB7 PF09486.10 ORF28219 - 0.1 13.0 0.1 0.22 11.9 0.1 1.6 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) SlyX PF04102.12 ORF28219 - 0.12 13.0 5.4 0.73 10.5 1.7 3.4 2 1 0 2 2 2 0 SlyX Tropomyosin PF00261.20 ORF28219 - 0.18 11.1 15.3 0.41 10.0 15.3 1.5 1 1 0 1 1 1 0 Tropomyosin eIF3_N PF09440.10 ORF28219 - 0.24 11.8 10.0 0.056 13.9 4.1 2.6 2 1 0 2 2 2 0 eIF3 subunit 6 N terminal domain Uso1_p115_C PF04871.13 ORF28219 - 0.28 11.6 16.5 0.033 14.6 10.5 2.2 2 0 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF3450 PF11932.8 ORF28219 - 0.32 10.3 8.8 0.024 14.0 3.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Flagellin_N PF00669.20 ORF28219 - 0.34 11.0 5.5 0.72 10.0 5.5 1.5 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region PspA_IM30 PF04012.12 ORF28219 - 0.35 10.4 10.4 0.54 9.8 5.8 2.3 2 0 0 2 2 2 0 PspA/IM30 family Laminin_II PF06009.12 ORF28219 - 0.36 10.9 12.7 0.089 12.8 9.3 1.8 2 0 0 2 2 1 0 Laminin Domain II DUF1216 PF06746.11 ORF28219 - 0.37 10.8 8.0 0.037 14.1 2.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1216) DUF641 PF04859.12 ORF28219 - 0.37 11.1 13.0 0.036 14.4 7.6 2.2 2 1 0 2 2 1 0 Plant protein of unknown function (DUF641) CENP-F_leu_zip PF10473.9 ORF28219 - 0.41 10.7 21.1 0.16 12.0 15.5 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 COG2 PF06148.11 ORF28219 - 0.44 10.6 8.4 0.058 13.5 3.1 2.2 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF2207 PF09972.9 ORF28219 - 0.61 8.8 3.8 0.84 8.3 3.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TolA_bind_tri PF16331.5 ORF28219 - 0.62 10.2 5.5 0.58 10.3 1.1 2.5 2 0 0 2 2 2 0 TolA binding protein trimerisation DUF1664 PF07889.12 ORF28219 - 0.64 10.1 9.6 0.069 13.2 2.8 2.4 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Cob_adeno_trans PF01923.18 ORF28219 - 0.65 10.1 3.4 0.35 11.0 0.7 1.8 2 0 0 2 2 2 0 Cobalamin adenosyltransferase Phage_HK97_TLTM PF06120.11 ORF28219 - 0.74 9.0 14.8 0.56 9.3 13.1 1.6 1 1 1 2 2 2 0 Tail length tape measure protein DUF948 PF06103.11 ORF28219 - 0.94 9.8 7.8 7.4 6.9 4.2 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Sipho_Gp157 PF05565.11 ORF28219 - 0.99 9.4 17.9 0.48 10.4 14.2 2.3 1 1 2 3 3 3 0 Siphovirus Gp157 DUF4407 PF14362.6 ORF28219 - 1 8.7 8.8 1.2 8.5 8.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF16 PF01519.16 ORF28219 - 1.1 9.8 17.0 0.22 12.1 12.5 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 MCC-bdg_PDZ PF10506.9 ORF28219 - 1.2 9.3 6.6 0.36 10.9 2.5 2.3 2 0 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome ZapB PF06005.12 ORF28219 - 1.2 9.6 24.4 0.16 12.5 3.9 3.7 1 1 3 4 4 3 0 Cell division protein ZapB HMMR_N PF15905.5 ORF28219 - 1.5 8.3 23.6 2.3 7.6 23.6 1.4 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Sec34 PF04136.15 ORF28219 - 1.7 8.5 12.8 0.98 9.3 7.8 2.4 1 1 1 2 2 2 0 Sec34-like family Fib_alpha PF08702.10 ORF28219 - 1.8 8.8 18.3 3.3 7.9 10.4 3.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMF_TATA_bd PF12325.8 ORF28219 - 1.8 8.8 16.5 2.7 8.2 7.6 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding CENP-H PF05837.12 ORF28219 - 2.2 8.7 15.0 0.49 10.8 8.0 2.4 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Med4 PF10018.9 ORF28219 - 2.3 7.8 17.0 0.18 11.5 11.8 1.8 2 1 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Spc7 PF08317.11 ORF28219 - 2.4 7.0 18.1 0.7 8.7 14.3 1.8 1 1 1 2 2 2 0 Spc7 kinetochore protein CSN5_C PF18323.1 ORF28219 - 2.5 9.1 11.4 2.2 9.2 7.8 2.4 2 0 0 2 2 2 0 Cop9 signalosome subunit 5 C-terminal domain Tropomyosin_1 PF12718.7 ORF28219 - 2.9 8.0 19.2 0.81 9.8 12.2 2.4 2 0 0 2 2 2 0 Tropomyosin like Seryl_tRNA_N PF02403.22 ORF28219 - 3.1 8.1 21.0 6.7 7.0 16.7 2.8 2 1 0 2 2 1 0 Seryl-tRNA synthetase N-terminal domain Occludin_ELL PF07303.13 ORF28219 - 3.4 8.4 17.9 0.22 12.3 10.4 2.4 2 2 1 3 3 3 0 Occludin homology domain TMPIT PF07851.13 ORF28219 - 3.7 6.7 15.2 0.2 10.9 8.0 2.0 2 0 0 2 2 2 0 TMPIT-like protein APG6_N PF17675.1 ORF28219 - 3.7 8.1 17.4 28 5.3 16.4 2.3 1 1 0 1 1 1 0 Apg6 coiled-coil region Fez1 PF06818.15 ORF28219 - 4.8 7.6 18.4 0.54 10.7 10.3 2.1 1 1 1 2 2 2 0 Fez1 FlaC_arch PF05377.11 ORF28219 - 7.1 7.1 14.0 11 6.5 4.9 3.7 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) LMBR1 PF04791.16 ORF28219 - 7.1 5.4 8.1 8.3 5.2 8.1 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2380 PF09533.10 ORF25521 - 0.034 13.8 0.4 0.049 13.2 0.4 1.2 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) Zip PF02535.22 ORF24280 - 1e-27 97.3 0.4 1.4e-27 96.8 0.4 1.2 1 0 0 1 1 1 1 ZIP Zinc transporter S-antigen PF05756.11 ORF24280 - 0.0074 16.6 0.2 0.045 14.1 0.0 2.2 2 0 0 2 2 2 1 S-antigen protein DUF2380 PF09533.10 ORF22637 - 0.034 13.8 0.4 0.049 13.2 0.4 1.2 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) Lipase_3 PF01764.25 ORF21155 - 2.3e-10 40.5 0.0 4.9e-10 39.4 0.0 1.6 1 1 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 ORF21155 - 1.1e-05 25.2 0.7 2.2e-05 24.1 0.7 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) PGAP1 PF07819.13 ORF21155 - 0.018 14.8 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein Abhydrolase_6 PF12697.7 ORF21155 - 0.028 15.0 0.2 0.03 14.9 0.2 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF2070 PF09843.9 ORF18545 - 0.22 9.8 9.8 0.28 9.4 9.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) EF-hand_1 PF00036.32 ORF16707 - 7.8e-07 28.2 0.4 8.9e-06 24.9 0.2 2.7 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF16707 - 8.3e-07 28.5 0.5 8.9e-05 22.1 0.3 3.0 3 0 0 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 ORF16707 - 1.3e-05 25.6 0.2 5.8e-05 23.5 0.1 2.1 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF16707 - 7.6e-05 22.0 2.6 0.0001 21.6 0.9 2.2 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF16707 - 0.00015 21.5 0.1 0.00068 19.4 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain pair Pyridox_ox_2 PF12900.7 ORF14064 - 6.9e-31 107.1 0.0 1.4e-30 106.1 0.0 1.5 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase HAD PF12710.7 ORF11376 - 4.4e-15 56.6 0.0 6.3e-15 56.1 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF11376 - 1.1e-12 48.7 0.1 2e-12 47.9 0.1 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 ORF11376 - 5.4e-09 35.8 0.0 1e-08 34.9 0.0 1.3 1 1 0 1 1 1 1 Putative Phosphatase Acid_phosphat_B PF03767.14 ORF11376 - 8.4e-05 22.3 0.1 0.0095 15.5 0.0 2.2 2 0 0 2 2 2 2 HAD superfamily, subfamily IIIB (Acid phosphatase) Hydrolase_3 PF08282.12 ORF11376 - 0.086 12.6 0.0 0.48 10.1 0.0 2.3 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase PFK PF00365.20 ORF11376 - 0.12 11.6 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Phosphofructokinase SRPRB PF09439.10 ORF112029 - 4.9e-25 88.0 0.5 3.8e-24 85.1 0.5 1.9 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF112029 - 1.3e-09 37.9 0.3 1.8e-09 37.4 0.3 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Arf PF00025.21 ORF112029 - 1.4e-09 37.6 0.1 6.6e-09 35.5 0.1 1.8 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF112029 - 8.8e-09 35.5 0.0 2e-08 34.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 ORF112029 - 2e-08 34.0 0.0 4.7e-08 32.8 0.0 1.6 1 1 0 1 1 1 1 Ras family RsgA_GTPase PF03193.16 ORF112029 - 2.1e-05 24.5 0.3 0.062 13.2 0.1 2.2 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 ORF112029 - 9.5e-05 22.6 0.0 0.0002 21.5 0.0 1.6 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase FeoB_N PF02421.18 ORF112029 - 0.0014 18.2 0.6 0.021 14.4 0.6 2.4 1 1 0 1 1 1 1 Ferrous iron transport protein B ATP_bind_1 PF03029.17 ORF112029 - 0.0038 17.0 0.4 0.0048 16.7 0.3 1.4 1 1 0 1 1 1 1 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 ORF112029 - 0.0049 16.9 0.4 3.4 7.7 0.0 2.6 2 1 1 3 3 3 2 Dynamin family ATPase_2 PF01637.18 ORF112029 - 0.0065 16.4 0.0 0.011 15.6 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 ORF112029 - 0.0073 16.1 0.0 0.021 14.5 0.0 1.7 1 1 1 2 2 2 1 IstB-like ATP binding protein ABC_tran PF00005.27 ORF112029 - 0.016 15.7 1.7 0.26 11.8 1.7 2.2 1 1 0 1 1 1 0 ABC transporter Rad17 PF03215.15 ORF112029 - 0.019 14.9 0.0 0.031 14.2 0.0 1.4 1 1 0 1 1 1 0 Rad17 P-loop domain AAA_15 PF13175.6 ORF112029 - 0.023 14.4 1.1 0.042 13.5 1.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 ORF112029 - 0.029 14.6 0.1 0.062 13.6 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF112029 - 0.032 14.7 0.8 0.074 13.5 0.8 1.9 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF112029 - 0.039 13.5 0.0 0.082 12.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region Hpr_kinase_N PF02603.16 ORF112029 - 0.049 13.7 0.2 2.4 8.2 0.1 3.0 3 0 0 3 3 3 0 HPr Serine kinase N terminus VirJ PF06057.11 ORF112029 - 0.055 13.3 0.0 0.08 12.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial virulence protein (VirJ) PduV-EutP PF10662.9 ORF112029 - 0.094 12.5 0.1 4.2 7.1 0.0 2.4 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ABC2_membrane_3 PF12698.7 ORF112029 - 0.93 8.5 5.6 3.2 6.7 5.7 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein Vps23_core PF09454.10 ORF111803 - 0.19 11.7 0.0 0.33 10.9 0.0 1.4 1 0 0 1 1 1 0 Vps23 core domain HTH_40 PF14493.6 ORF109282 - 0.53 10.8 3.0 22 5.6 0.4 3.2 2 2 1 3 3 3 0 Helix-turn-helix domain NGF PF00243.18 ORF109282 - 1.7 8.9 5.7 9.5 6.5 0.4 2.5 2 1 0 2 2 2 0 Nerve growth factor family tRNA-synt_1d PF00750.19 ORF108498 - 2.4e-66 224.1 0.0 2.9e-66 223.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 ORF108498 - 9.2e-05 23.0 0.0 0.00027 21.5 0.0 1.8 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF108498 - 0.0038 16.6 0.0 0.0051 16.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain Rotamase_2 PF13145.6 ORF108498 - 0.0061 17.4 0.1 0.49 11.2 0.1 2.1 2 0 0 2 2 2 1 PPIC-type PPIASE domain DUF4298 PF14131.6 ORF108498 - 0.043 13.8 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Pyridox_ox_2 PF12900.7 ORF108038 - 6.9e-31 107.1 0.0 1.4e-30 106.1 0.0 1.5 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase SnoaL_2 PF12680.7 ORF104798 - 8.7e-09 36.0 1.7 0.0024 18.5 0.2 2.5 2 1 1 3 3 3 2 SnoaL-like domain DUF4440 PF14534.6 ORF104798 - 4.4e-08 33.5 0.2 0.0022 18.4 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) Polyketide_cyc2 PF10604.9 ORF104798 - 0.012 15.8 0.3 3.7 7.8 0.0 2.5 2 1 0 2 2 2 0 Polyketide cyclase / dehydrase and lipid transport DUF3552 PF12072.8 ORF102758 - 0.00043 19.8 18.0 0.00043 19.8 18.0 2.4 3 1 0 3 3 3 1 Domain of unknown function (DUF3552) DUF4200 PF13863.6 ORF102758 - 0.018 15.5 4.0 0.018 15.5 4.0 4.0 4 1 1 5 5 5 0 Domain of unknown function (DUF4200) Sec20 PF03908.13 ORF102758 - 0.23 11.4 7.4 6.4 6.8 1.3 2.9 1 1 1 2 2 2 0 Sec20 Atg14 PF10186.9 ORF102758 - 2.2 7.3 20.2 0.22 10.6 15.8 1.5 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 NuA4 PF09340.10 ORF102758 - 6.7 6.7 11.8 0.17 11.8 0.5 3.1 2 1 0 2 2 2 0 Histone acetyltransferase subunit NuA4 PEARLI-4 PF05278.12 ORF102758 - 7.8 6.0 18.1 0.049 13.2 4.1 2.5 2 1 1 3 3 3 0 Arabidopsis phospholipase-like protein (PEARLI 4) PROCN PF08083.11 NODE_27595_length_778_cov_139.506057_g21545_i1reverse_frame_2 - 3.6e-140 467.3 7.1 4.5e-140 467.0 7.1 1.0 1 0 0 1 1 1 1 PROCN (NUC071) domain CBM26 PF16738.5 NODE_27582_length_778_cov_289.558546_g21650_i0reverse_frame_2 - 0.013 15.7 8.6 6.8 7.0 0.1 4.1 3 1 1 4 4 4 0 Starch-binding module 26 zf-RING_4 PF14570.6 NODE_27582_length_778_cov_289.558546_g21650_i0forward_frame_2 - 0.036 13.9 0.0 31 4.5 0.0 3.2 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain Sulfakinin PF08257.11 NODE_27582_length_778_cov_289.558546_g21650_i0forward_frame_2 - 1.3 9.3 12.4 1.2e+02 3.4 0.1 5.8 5 0 0 5 5 5 0 Sulfakinin family SHIPPO-rpt PF07004.12 NODE_27567_length_779_cov_3.668011_g21637_i0reverse_frame_2 - 1.1 10.3 15.6 7.2 7.7 0.0 4.6 4 1 0 4 4 4 0 Sperm-tail PG-rich repeat Sporozoite_P67 PF05642.11 NODE_27566_length_779_cov_31.685484_g21636_i0reverse_frame_2 - 0.01 14.0 2.9 0.012 13.7 2.9 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Mucin PF01456.17 NODE_27566_length_779_cov_31.685484_g21636_i0reverse_frame_2 - 0.036 14.1 24.9 0.025 14.6 22.9 1.9 2 0 0 2 2 2 0 Mucin-like glycoprotein DUF3439 PF11921.8 NODE_27566_length_779_cov_31.685484_g21636_i0reverse_frame_2 - 0.17 11.8 18.8 0.36 10.8 18.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) EphA2_TM PF14575.6 NODE_27566_length_779_cov_31.685484_g21636_i0forward_frame_3 - 0.033 15.1 1.3 0.057 14.3 1.3 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF3311 PF11755.8 NODE_27566_length_779_cov_31.685484_g21636_i0forward_frame_3 - 0.04 13.9 2.2 0.04 13.9 2.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3311) ECSCR PF15820.5 NODE_27566_length_779_cov_31.685484_g21636_i0forward_frame_3 - 7.3 6.5 12.8 15 5.5 12.8 1.5 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Yip1 PF04893.17 NODE_27566_length_779_cov_31.685484_g21636_i0forward_frame_2 - 0.0047 16.7 1.4 0.063 13.0 0.0 2.1 2 0 0 2 2 2 1 Yip1 domain Transformer PF06495.11 NODE_27566_length_779_cov_31.685484_g21636_i0forward_frame_2 - 0.71 10.0 20.0 1.3 9.1 20.0 1.4 1 0 0 1 1 1 0 Fruit fly transformer protein SBF2 PF12335.8 NODE_27565_length_779_cov_50.094086_g21635_i0reverse_frame_2 - 8.9e-07 28.8 1.7 8.9e-07 28.8 1.7 2.0 2 1 0 2 2 2 1 Myotubularin protein Mycobact_memb PF05423.13 NODE_27565_length_779_cov_50.094086_g21635_i0reverse_frame_2 - 0.055 13.4 0.1 0.097 12.6 0.1 1.4 1 0 0 1 1 1 0 Mycobacterium membrane protein zf-C2H2_2 PF12756.7 NODE_27565_length_779_cov_50.094086_g21635_i0reverse_frame_2 - 0.15 12.4 9.3 3 8.2 0.6 3.4 3 1 0 3 3 3 0 C2H2 type zinc-finger (2 copies) Metal_CEHH PF14455.6 NODE_27563_length_779_cov_76.317204_g21633_i0forward_frame_3 - 0.038 13.6 0.0 0.071 12.7 0.0 1.4 1 0 0 1 1 1 0 Predicted metal binding domain Methyltransf_23 PF13489.6 NODE_27559_length_779_cov_103.146505_g21629_i0forward_frame_3 - 0.0026 17.6 0.0 0.0033 17.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain zf-C2HE PF16278.5 NODE_27559_length_779_cov_103.146505_g21629_i0forward_frame_3 - 0.061 13.8 0.0 0.16 12.5 0.0 1.7 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger zf-MYND PF01753.18 NODE_27559_length_779_cov_103.146505_g21629_i0forward_frame_3 - 0.097 12.8 9.3 0.19 11.8 9.3 1.5 1 0 0 1 1 1 0 MYND finger PCMT PF01135.19 NODE_27559_length_779_cov_103.146505_g21629_i0forward_frame_3 - 0.21 11.3 0.0 2.4 7.8 0.0 2.0 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) zf-FCS PF06467.14 NODE_27559_length_779_cov_103.146505_g21629_i0forward_frame_3 - 2.5 8.1 7.5 15 5.6 0.1 3.0 3 0 0 3 3 3 0 MYM-type Zinc finger with FCS sequence motif CbiQ PF02361.16 NODE_27550_length_779_cov_181.438172_g21621_i0forward_frame_2 - 0.55 9.8 6.5 0.45 10.1 0.2 2.1 1 1 1 2 2 2 0 Cobalt transport protein FGFR3_TM PF18123.1 NODE_27550_length_779_cov_181.438172_g21621_i0forward_frame_2 - 1.8 8.2 10.8 2 8.0 1.9 2.4 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Malate_synthase PF01274.22 NODE_27521_length_780_cov_88.593289_g21596_i0reverse_frame_2 - 0.091 11.0 0.2 0.11 10.7 0.2 1.1 1 0 0 1 1 1 0 Malate synthase Forkhead PF00250.18 NODE_27499_length_780_cov_322.554362_g21574_i0reverse_frame_3 - 0.0023 18.1 0.5 0.0055 16.9 0.5 1.7 1 0 0 1 1 1 1 Forkhead domain DUF5063 PF16702.5 ORF98840 - 0.076 13.4 0.9 7.9 6.8 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5063) THOC7 PF05615.13 ORF98840 - 0.12 12.7 6.7 0.16 12.2 0.9 2.7 1 1 1 2 2 2 0 Tho complex subunit 7 DUF2894 PF11445.8 ORF98840 - 0.13 12.7 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) DUF3452 PF11934.8 ORF98840 - 0.31 10.6 2.3 12 5.4 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3452) Syntaxin_2 PF14523.6 ORF98840 - 5.3 7.5 8.3 5.8 7.4 5.0 2.7 3 1 0 3 3 3 0 Syntaxin-like protein FAD_binding_5 PF00941.21 ORF9795 - 9e-20 71.1 0.0 1.6e-19 70.2 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 ORF9795 - 2.1e-05 24.6 0.3 6.8e-05 23.0 0.3 1.9 1 1 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain COX3 PF00510.18 ORF92036 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF91527 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III NUDIX PF00293.28 ORF91406 - 5.4e-12 45.9 0.0 8.4e-12 45.3 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain GSIII_N PF12437.8 ORF91406 - 0.11 12.1 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 Glutamine synthetase type III N terminal COX3 PF00510.18 ORF90928 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF90245 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF89824 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III ABC_tran PF00005.27 ORF89412 - 3.4e-29 102.1 0.0 4.7e-29 101.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 ORF89412 - 5.1e-07 30.2 0.0 6.9e-07 29.8 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 ORF89412 - 4.2e-06 26.3 0.0 0.0014 18.1 0.0 2.2 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF89412 - 2.3e-05 24.4 0.0 0.023 14.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 ORF89412 - 0.00018 21.8 0.0 0.00029 21.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF89412 - 0.00026 21.2 0.4 0.0011 19.2 0.3 2.1 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF89412 - 0.00047 20.1 0.2 0.0011 18.9 0.2 1.6 1 1 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF89412 - 0.00064 19.4 0.0 0.0013 18.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 ORF89412 - 0.0044 16.9 0.0 0.021 14.8 0.0 1.9 2 0 0 2 2 2 1 NACHT domain AAA_30 PF13604.6 ORF89412 - 0.013 15.2 0.0 0.035 13.8 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF89412 - 0.017 14.7 0.0 0.043 13.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 ORF89412 - 0.04 14.2 0.2 0.53 10.6 0.0 2.3 1 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit Viral_helicase1 PF01443.18 ORF89412 - 0.057 13.1 0.0 0.091 12.5 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase DUF815 PF05673.13 ORF89412 - 0.059 12.5 0.0 0.08 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) FtsK_SpoIIIE PF01580.18 ORF89412 - 0.063 12.6 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family Septin PF00735.18 ORF89412 - 0.07 12.4 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Septin AAA_7 PF12775.7 ORF89412 - 0.072 12.6 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_23 PF13476.6 ORF89412 - 0.09 13.3 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF89412 - 0.095 12.4 0.0 0.34 10.6 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_14 PF13173.6 ORF89412 - 0.096 12.7 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF89412 - 0.1 13.0 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 RNA helicase MMR_HSR1 PF01926.23 ORF89412 - 0.1 12.7 0.0 0.27 11.4 0.0 1.8 2 0 0 2 2 1 0 50S ribosome-binding GTPase TsaE PF02367.17 ORF89412 - 0.13 12.3 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NB-ARC PF00931.22 ORF89412 - 0.13 11.4 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Gtr1_RagA PF04670.12 ORF89412 - 0.15 11.4 0.0 0.23 10.8 0.0 1.3 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region cobW PF02492.19 ORF89412 - 0.15 11.7 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain HECT PF00632.25 ORF86846 - 0.093 12.2 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 HECT-domain (ubiquitin-transferase) Pro_isomerase PF00160.21 ORF86482 - 1.1e-41 142.7 0.0 1.9e-41 142.0 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Fer2_3 PF13085.6 ORF86344 - 5.5e-30 103.6 0.0 9.6e-30 102.8 0.0 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 ORF86344 - 3.8e-12 46.5 3.8 8.6e-12 45.3 1.9 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF86344 - 7.5e-11 42.0 1.8 7.5e-11 42.0 1.8 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF86344 - 1.4e-08 35.1 12.9 7.5e-07 29.6 4.4 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF86344 - 5.7e-07 29.6 5.3 0.002 18.3 0.5 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF86344 - 2.5e-06 28.0 2.8 2.5e-06 28.0 2.8 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF86344 - 6.4e-06 27.0 1.8 6.4e-06 27.0 1.8 2.2 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 ORF86344 - 4.5e-05 23.6 5.6 0.01 16.1 0.1 2.6 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 ORF86344 - 0.00038 20.1 1.4 0.00038 20.1 1.4 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 ORF86344 - 0.0026 18.1 1.6 0.0026 18.1 1.6 2.6 3 0 0 3 3 2 1 4Fe-4S binding domain Fer2 PF00111.27 ORF86344 - 0.0044 16.9 1.0 0.012 15.5 0.0 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_2 PF12797.7 ORF86344 - 0.0059 16.6 1.7 0.0059 16.6 1.7 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 ORF86344 - 0.011 15.8 2.6 0.011 15.8 2.6 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 ORF86344 - 0.02 15.4 0.4 0.02 15.4 0.4 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 ORF86344 - 0.12 13.4 3.7 0.12 13.4 3.7 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 ORF86344 - 0.12 12.5 12.4 0.15 12.2 8.1 2.5 2 1 0 2 2 1 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF86344 - 0.13 13.1 7.5 0.99 10.3 0.1 2.8 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 ORF86344 - 0.55 11.0 5.0 3.5 8.5 0.1 2.9 3 0 0 3 3 3 0 4Fe-4S single cluster domain Pox_A30L_A26L PF06086.12 ORF8511 - 0.0097 15.6 0.6 0.38 10.4 0.7 2.1 2 0 0 2 2 2 2 Orthopoxvirus A26L/A30L protein HEPN_LA2681 PF18733.1 ORF8511 - 0.097 12.0 6.0 0.23 10.8 5.9 1.6 2 0 0 2 2 2 0 LA2681-like HEPN adh_short_C2 PF13561.6 ORF83985 - 2.7e-52 177.6 1.4 3.7e-52 177.2 1.4 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF83985 - 2.5e-46 157.6 3.0 5.5e-46 156.5 3.0 1.5 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF83985 - 2.3e-10 40.7 5.1 4.8e-09 36.4 5.1 2.2 1 1 0 1 1 1 1 KR domain DFP PF04127.15 ORF83985 - 0.0014 18.5 0.8 0.0023 17.8 0.8 1.4 1 1 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein Epimerase PF01370.21 ORF83985 - 0.0019 17.7 0.1 0.011 15.2 0.1 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 2-Hacid_dh_C PF02826.19 ORF83985 - 0.022 14.1 0.0 0.036 13.4 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 ORF83985 - 0.022 15.2 0.0 0.062 13.7 0.1 1.8 2 1 0 2 2 2 0 Putative NAD(P)-binding THF_DHG_CYH_C PF02882.19 ORF83985 - 0.024 14.0 0.0 0.31 10.4 0.0 2.5 2 1 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain COX3 PF00510.18 ORF79395 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III Apolipoprotein PF01442.18 ORF78465 - 4.6e-06 26.6 19.4 0.00045 20.1 9.7 2.3 1 1 1 2 2 2 2 Apolipoprotein A1/A4/E domain DUF1664 PF07889.12 ORF78465 - 9.1e-06 25.7 13.0 0.007 16.4 0.1 3.2 2 1 1 3 3 3 2 Protein of unknown function (DUF1664) DUF1515 PF07439.11 ORF78465 - 0.0011 18.9 0.5 0.0011 18.9 0.5 3.0 1 1 4 5 5 5 1 Protein of unknown function (DUF1515) Baculo_PEP_C PF04513.12 ORF78465 - 0.0069 16.4 10.1 2.3 8.2 3.9 3.1 1 1 2 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus HMMR_N PF15905.5 ORF78465 - 0.012 15.1 15.8 0.0099 15.4 9.8 2.1 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal TBD PF12845.7 ORF78465 - 0.021 14.7 0.1 0.069 13.1 0.0 2.0 1 1 0 1 1 1 0 TBD domain Interferon PF00143.19 ORF78465 - 0.032 14.4 10.2 0.21 11.7 3.7 2.3 1 1 0 2 2 2 0 Interferon alpha/beta domain YtxH PF12732.7 ORF78465 - 0.05 14.1 4.8 9.1 6.9 1.1 3.6 1 1 0 2 2 2 0 YtxH-like protein DUF883 PF05957.13 ORF78465 - 0.27 11.9 13.1 7 7.3 2.4 3.9 1 1 0 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF1525 PF07511.11 ORF78465 - 0.39 10.9 6.9 0.34 11.1 3.2 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1525) DUF4709 PF15821.5 ORF78465 - 0.4 11.0 8.7 3.5 7.9 0.2 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4709) Spectrin PF00435.21 ORF78465 - 0.42 11.1 12.8 2.7 8.5 3.9 3.2 1 1 2 3 3 3 0 Spectrin repeat Hormone_1 PF00103.20 ORF78465 - 0.46 10.2 7.6 4.5 7.0 0.5 2.9 1 1 2 3 3 3 0 Somatotropin hormone family Fib_alpha PF08702.10 ORF78465 - 1.1 9.4 12.5 1.5 9.0 7.4 2.6 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family DUF4811 PF16069.5 ORF76864 - 0.21 11.4 0.1 0.42 10.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) COX3 PF00510.18 ORF76350 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF76152 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III Ribosomal_S8e PF01201.22 ORF75476 - 4.3e-46 156.5 5.4 4.3e-46 156.5 5.4 1.9 1 1 1 2 2 2 1 Ribosomal protein S8e COX3 PF00510.18 ORF74688 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF74573 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III PS-DH PF14765.6 ORF73909 - 0.00037 19.8 0.3 0.00052 19.3 0.3 1.3 1 0 0 1 1 1 1 Polyketide synthase dehydratase TPR_12 PF13424.6 ORF73909 - 0.0016 18.7 1.3 0.016 15.5 0.2 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat Helicase_C PF00271.31 ORF71201 - 9.5e-28 96.8 0.0 1.2e-27 96.4 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain OTU PF02338.19 ORF71101 - 8.7e-09 35.9 0.0 1.5e-08 35.1 0.0 1.4 1 0 0 1 1 1 1 OTU-like cysteine protease Neur_chan_memb PF02932.16 ORF70406 - 0.047 13.7 2.8 0.073 13.1 2.8 1.4 1 1 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region HSCB_C PF07743.13 ORF70406 - 0.05 14.1 1.3 0.05 14.1 1.3 2.9 2 1 0 2 2 2 0 HSCB C-terminal oligomerisation domain Ion_trans PF00520.31 ORF70406 - 0.16 11.1 3.7 0.33 10.2 3.7 1.5 1 0 0 1 1 1 0 Ion transport protein Synaptonemal_3 PF15191.6 ORF67576 - 0.0036 17.1 1.0 0.035 13.9 0.1 2.6 2 0 0 2 2 2 1 Synaptonemal complex central element protein 3 DUF763 PF05559.11 ORF67576 - 0.68 9.1 8.9 0.2 10.8 5.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF763) PfkB PF00294.24 ORF66787 - 4.9e-37 127.9 1.0 5.1e-36 124.5 0.9 1.9 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF66787 - 0.12 11.7 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase COX3 PF00510.18 ORF65679 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III EamA PF00892.20 ORF64910 - 1.7e-20 73.6 27.7 1e-10 42.0 6.9 2.1 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 ORF64910 - 0.0037 16.7 17.6 0.0052 16.2 17.6 1.2 1 0 0 1 1 1 1 Triose-phosphate Transporter family PHO4 PF01384.20 ORF64910 - 0.25 10.4 8.3 0.35 9.9 8.1 1.4 1 1 0 1 1 1 0 Phosphate transporter family MeMO_Hyd_G PF02964.16 ORF6369 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain DUF5063 PF16702.5 ORF62386 - 0.076 13.4 0.9 7.9 6.8 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5063) THOC7 PF05615.13 ORF62386 - 0.12 12.7 6.7 0.16 12.2 0.9 2.7 1 1 1 2 2 2 0 Tho complex subunit 7 DUF2894 PF11445.8 ORF62386 - 0.13 12.7 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) DUF3452 PF11934.8 ORF62386 - 0.31 10.6 2.3 12 5.4 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3452) Syntaxin_2 PF14523.6 ORF62386 - 5.3 7.5 8.3 5.8 7.4 5.0 2.7 3 1 0 3 3 3 0 Syntaxin-like protein Kelch_1 PF01344.25 ORF6192 - 2.3e-34 116.7 0.0 1e-09 37.8 0.0 4.1 4 0 0 4 4 4 4 Kelch motif Kelch_6 PF13964.6 ORF6192 - 1.7e-26 91.6 0.4 1.2e-06 28.5 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_3 PF13415.6 ORF6192 - 8.8e-26 89.7 0.3 2.3e-07 30.9 0.0 4.0 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF6192 - 2e-24 85.3 0.5 3.4e-06 27.0 0.0 4.1 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF6192 - 1.2e-21 75.8 0.2 2.9e-06 27.0 0.0 4.3 4 0 0 4 4 4 4 Kelch motif Kelch_5 PF13854.6 ORF6192 - 4.8e-20 71.1 0.9 5.6e-07 29.4 0.0 4.3 4 0 0 4 4 4 4 Kelch motif BTB PF00651.31 ORF6192 - 5.7e-08 33.0 0.0 1.1e-07 32.1 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain BNR_4 PF15892.5 ORF6192 - 0.062 12.7 0.2 8.1 5.7 0.1 2.1 2 0 0 2 2 2 0 BNR repeat-containing family member EII-Sor PF03609.14 ORF60380 - 3.1e-72 242.8 28.2 3.5e-72 242.6 28.2 1.0 1 0 0 1 1 1 1 PTS system sorbose-specific iic component DUF5063 PF16702.5 ORF57302 - 0.076 13.4 0.9 7.9 6.8 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5063) THOC7 PF05615.13 ORF57302 - 0.12 12.7 6.7 0.16 12.2 0.9 2.7 1 1 1 2 2 2 0 Tho complex subunit 7 DUF2894 PF11445.8 ORF57302 - 0.13 12.7 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) DUF3452 PF11934.8 ORF57302 - 0.31 10.6 2.3 12 5.4 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3452) Syntaxin_2 PF14523.6 ORF57302 - 5.3 7.5 8.3 5.8 7.4 5.0 2.7 3 1 0 3 3 3 0 Syntaxin-like protein Glutaredoxin PF00462.24 ORF54454 - 1.3e-06 28.5 0.0 4.9e-06 26.7 0.0 2.0 1 0 0 1 1 1 1 Glutaredoxin Armet PF10208.9 ORF54454 - 9.8e-05 22.3 0.1 0.17 11.8 0.0 2.4 3 0 0 3 3 3 2 Degradation arginine-rich protein for mis-folding DUF5364 PF17322.2 ORF54454 - 0.014 15.7 2.2 0.057 13.7 2.2 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5364) Rho_N PF07498.12 ORF54454 - 0.051 13.5 0.3 1.3 9.0 0.1 2.7 2 1 0 2 2 2 0 Rho termination factor, N-terminal domain DUF836 PF05768.14 ORF54454 - 0.12 12.8 0.0 0.37 11.2 0.0 1.8 2 0 0 2 2 2 0 Glutaredoxin-like domain (DUF836) SAP PF02037.27 ORF54454 - 0.28 11.0 5.1 4.5 7.1 0.0 4.0 5 0 0 5 5 5 0 SAP domain T2SSL PF05134.13 ORF53757 - 0.0066 15.8 0.9 0.0098 15.3 0.9 1.4 1 1 0 1 1 1 1 Type II secretion system (T2SS), protein L PilM_2 PF11104.8 ORF53757 - 0.02 14.0 0.0 0.1 11.6 0.0 1.9 2 0 0 2 2 2 0 Type IV pilus assembly protein PilM; Pox_A30L_A26L PF06086.12 ORF53514 - 0.0097 15.6 0.6 0.38 10.4 0.7 2.1 2 0 0 2 2 2 2 Orthopoxvirus A26L/A30L protein HEPN_LA2681 PF18733.1 ORF53514 - 0.097 12.0 6.0 0.23 10.8 5.9 1.6 2 0 0 2 2 2 0 LA2681-like HEPN MeMO_Hyd_G PF02964.16 ORF51783 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain Pox_A30L_A26L PF06086.12 ORF51090 - 0.0097 15.6 0.6 0.38 10.4 0.7 2.1 2 0 0 2 2 2 2 Orthopoxvirus A26L/A30L protein HEPN_LA2681 PF18733.1 ORF51090 - 0.097 12.0 6.0 0.23 10.8 5.9 1.6 2 0 0 2 2 2 0 LA2681-like HEPN COX3 PF00510.18 ORF50457 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III Ribosomal_S8e PF01201.22 ORF48797 - 1.5e-43 148.2 4.6 1.5e-43 148.2 4.6 1.9 1 1 1 2 2 2 1 Ribosomal protein S8e Kelch_6 PF13964.6 ORF4680 - 4.9e-27 93.3 7.6 2.5e-07 30.8 0.0 5.6 3 2 2 5 5 5 5 Kelch motif Kelch_4 PF13418.6 ORF4680 - 2e-21 75.7 0.6 1.5e-06 28.1 0.0 5.2 5 1 0 5 5 5 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF4680 - 1e-19 69.9 14.7 2.4e-08 33.4 0.1 6.4 6 1 0 6 6 6 4 Kelch motif Kelch_3 PF13415.6 ORF4680 - 1.7e-10 40.9 2.2 0.018 15.3 0.0 5.1 3 2 1 5 5 5 2 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF4680 - 1.9e-07 30.8 0.9 0.025 14.5 0.0 4.4 5 0 0 5 5 5 2 Kelch motif Kelch_5 PF13854.6 ORF4680 - 1.2e-05 25.1 8.9 0.12 12.3 0.1 5.3 5 1 0 5 5 5 2 Kelch motif PQQ PF01011.21 ORF4680 - 0.07 13.1 2.2 43 4.3 0.0 4.0 4 0 0 4 4 4 0 PQQ enzyme repeat NicO PF03824.16 ORF45238 - 2.9 7.2 8.7 4.4 6.6 8.7 1.3 1 0 0 1 1 1 0 High-affinity nickel-transport protein COX3 PF00510.18 ORF43286 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III Lipase_3 PF01764.25 ORF429 - 5.8e-24 84.6 0.0 9.8e-24 83.8 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) DUF676 PF05057.14 ORF429 - 0.0016 18.0 0.1 0.0026 17.3 0.1 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Peptidase_S9 PF00326.21 ORF429 - 0.0035 16.8 0.1 0.0052 16.3 0.1 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family PGAP1 PF07819.13 ORF429 - 0.04 13.6 0.1 0.057 13.1 0.1 1.2 1 0 0 1 1 1 0 PGAP1-like protein Hydrolase_4 PF12146.8 ORF429 - 0.048 12.9 0.1 0.075 12.3 0.1 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 NAD_kinase PF01513.21 ORF41688 - 2.7e-15 56.3 0.0 3.1e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 ORF41688 - 0.02 14.5 0.0 0.034 13.7 0.0 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain CALCOCO1 PF07888.11 ORF39662 - 0.0053 15.7 0.8 0.0067 15.3 0.8 1.2 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like DUF3209 PF11483.8 ORF39662 - 0.049 14.1 0.8 0.099 13.1 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3209) DUF3439 PF11921.8 ORF39662 - 0.06 13.3 4.6 0.042 13.8 1.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) V_ATPase_I PF01496.19 ORF39662 - 0.079 10.9 0.3 0.09 10.7 0.3 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family AMP-binding PF00501.28 ORF38160 - 1.2e-40 139.5 0.0 1.4e-40 139.2 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme DUF5063 PF16702.5 ORF37871 - 0.076 13.4 0.9 7.9 6.8 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5063) THOC7 PF05615.13 ORF37871 - 0.12 12.7 6.7 0.16 12.2 0.9 2.7 1 1 1 2 2 2 0 Tho complex subunit 7 DUF2894 PF11445.8 ORF37871 - 0.13 12.7 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) DUF3452 PF11934.8 ORF37871 - 0.31 10.6 2.3 12 5.4 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3452) Syntaxin_2 PF14523.6 ORF37871 - 5.3 7.5 8.3 5.8 7.4 5.0 2.7 3 1 0 3 3 3 0 Syntaxin-like protein Cation_efflux PF01545.21 ORF37383 - 1.1e-14 54.6 8.8 1.6e-14 54.1 8.8 1.2 1 0 0 1 1 1 1 Cation efflux family Adaptin_N PF01602.20 ORF36849 - 0.13 10.8 0.0 0.19 10.3 0.0 1.3 1 0 0 1 1 1 0 Adaptin N terminal region Metallophos PF00149.28 ORF36310 - 1.2e-17 65.1 3.9 1.9e-17 64.5 3.9 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF36310 - 5.6e-14 52.7 0.1 1.5e-13 51.3 0.0 1.8 2 0 0 2 2 2 1 Iron/zinc purple acid phosphatase-like protein C MeMO_Hyd_G PF02964.16 ORF36141 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain Aldedh PF00171.22 ORF35374 - 8.9e-41 139.9 0.0 1e-40 139.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Jacalin PF01419.17 ORF35091 - 1.6e-05 24.8 0.0 0.11 12.4 0.0 2.2 2 0 0 2 2 2 2 Jacalin-like lectin domain Cys_Knot_tox PF17486.2 ORF34845 - 1.4 9.2 4.2 0.34 11.2 0.6 1.8 2 0 0 2 2 2 0 Cystine knot toxins Shikimate_DH PF01488.20 ORF30452 - 3e-09 37.1 0.0 2.4e-08 34.1 0.0 2.0 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase SDH_C PF18317.1 ORF30452 - 3.4e-09 36.3 0.0 8e-09 35.1 0.0 1.7 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain GFO_IDH_MocA PF01408.22 ORF30452 - 0.00031 21.5 0.1 0.00097 19.9 0.0 1.8 1 1 1 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 ORF30452 - 0.0063 15.9 0.0 0.0094 15.3 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 ORF30452 - 0.052 14.1 0.0 0.33 11.6 0.0 2.1 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Shikimate_dh_N PF08501.11 ORF30452 - 0.14 12.4 0.2 0.26 11.6 0.2 1.4 1 0 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain PPR_3 PF13812.6 ORF30350 - 1.5e-07 31.4 0.0 0.0097 16.0 0.0 2.4 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF30350 - 7.6e-06 26.0 0.0 0.18 12.0 0.0 2.9 3 0 0 3 3 3 2 PPR repeat family Smr PF01713.21 ORF30350 - 2e-05 24.9 0.1 3.8e-05 23.9 0.1 1.5 1 0 0 1 1 1 1 Smr domain PPR_long PF17177.4 ORF30350 - 0.0028 17.0 0.2 0.21 10.9 0.1 2.0 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 ORF30350 - 0.006 16.7 0.3 32 5.1 0.1 3.5 4 0 0 4 4 4 0 PPR repeat ELYS PF13934.6 ORF30350 - 0.074 13.0 0.2 0.12 12.4 0.2 1.3 1 0 0 1 1 1 0 Nuclear pore complex assembly PPR_1 PF12854.7 ORF30350 - 0.13 12.0 0.0 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 PPR repeat MeMO_Hyd_G PF02964.16 ORF29670 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain COX3 PF00510.18 ORF25339 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III Cytochrome-c551 PF10643.9 ORF23321 - 0.13 11.8 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 TERT_thumb PF17984.1 ORF23321 - 0.22 11.4 0.0 0.34 10.8 0.0 1.2 1 0 0 1 1 1 0 Telomerase reverse transcriptase thumb DNA binding domain PS-DH PF14765.6 ORF21707 - 0.00037 19.8 0.3 0.00052 19.3 0.3 1.3 1 0 0 1 1 1 1 Polyketide synthase dehydratase TPR_12 PF13424.6 ORF21707 - 0.0016 18.7 1.3 0.016 15.5 0.2 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat A2L_zn_ribbon PF08792.10 ORF21401 - 0.073 12.8 3.5 0.16 11.7 3.5 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain MeMO_Hyd_G PF02964.16 ORF21066 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain PI3_PI4_kinase PF00454.27 ORF20593 - 1.2e-25 90.8 1.4 9.4e-20 71.5 0.5 2.1 1 1 1 2 2 2 2 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 ORF20593 - 0.16 11.3 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) COX3 PF00510.18 ORF20025 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III PapD-like PF14874.6 ORF16520 - 1.8e-06 28.1 0.0 3.2e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Flagellar-associated PapD-like ASH PF15780.5 ORF16520 - 2.4e-06 27.7 0.5 0.0024 18.1 0.1 2.9 2 1 1 3 3 3 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF1573 PF07610.11 ORF16520 - 0.0071 16.4 1.0 1.8 8.7 0.1 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF1573) NmrA PF05368.13 ORF14656 - 1e-14 54.7 0.0 1.8e-14 53.8 0.0 1.4 1 1 0 1 1 1 1 NmrA-like family CENP-F_leu_zip PF10473.9 ORF13546 - 0.00041 20.4 11.6 0.00083 19.4 11.6 1.5 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Atg14 PF10186.9 ORF13546 - 0.0045 16.1 7.7 0.0057 15.8 7.7 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 XhlA PF10779.9 ORF13546 - 0.029 14.6 3.6 0.11 12.7 0.5 2.4 2 0 0 2 2 2 0 Haemolysin XhlA DUF724 PF05266.14 ORF13546 - 0.055 13.3 13.2 0.078 12.8 13.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ERM PF00769.19 ORF13546 - 0.11 12.2 23.9 0.17 11.7 23.9 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Leu_zip PF15294.6 ORF13546 - 0.15 11.6 9.5 0.2 11.1 9.5 1.1 1 0 0 1 1 1 0 Leucine zipper Tropomyosin_1 PF12718.7 ORF13546 - 0.17 12.0 16.5 0.26 11.4 16.5 1.2 1 0 0 1 1 1 0 Tropomyosin like DUF3584 PF12128.8 ORF13546 - 0.2 9.1 12.5 0.24 8.8 12.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Macoilin PF09726.9 ORF13546 - 0.21 10.1 8.5 0.25 9.8 8.5 1.1 1 0 0 1 1 1 0 Macoilin family DUF1664 PF07889.12 ORF13546 - 0.29 11.2 3.4 0.55 10.3 3.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) FAM76 PF16046.5 ORF13546 - 0.33 10.3 8.5 0.47 9.8 8.5 1.2 1 0 0 1 1 1 0 FAM76 protein HAUS-augmin3 PF14932.6 ORF13546 - 0.44 10.1 12.6 0.61 9.6 12.6 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 YlqD PF11068.8 ORF13546 - 0.54 10.6 16.3 0.075 13.4 11.2 1.8 1 1 1 2 2 2 0 YlqD protein AP1AR PF15745.5 ORF13546 - 0.8 9.3 8.9 1.1 8.8 8.9 1.1 1 0 0 1 1 1 0 AP-1 complex-associated regulatory protein DUF5082 PF16888.5 ORF13546 - 1.1 9.5 18.1 0.46 10.8 8.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) OmpH PF03938.14 ORF13546 - 1.1 9.6 19.7 1.7 9.0 19.7 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) ArnB_C PF18677.1 ORF13546 - 1.5 9.0 10.6 1.1 9.4 8.6 1.8 1 1 1 2 2 2 0 Archaellum regulatory network B, C-terminal domain V_ATPase_I PF01496.19 ORF13546 - 1.7 6.4 5.0 2.1 6.2 5.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ZapB PF06005.12 ORF13546 - 1.9 9.0 25.1 0.091 13.2 10.0 2.6 1 1 1 2 2 2 0 Cell division protein ZapB APG6_N PF17675.1 ORF13546 - 2.3 8.8 23.6 7.9 7.0 23.6 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF13546 - 2.8 6.7 15.0 3.8 6.3 15.0 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DivIC PF04977.15 ORF13546 - 2.9 7.7 14.4 0.88 9.4 5.4 2.4 1 1 1 2 2 2 0 Septum formation initiator CENP-K PF11802.8 ORF13546 - 3.4 7.2 12.1 4.7 6.7 12.1 1.1 1 0 0 1 1 1 0 Centromere-associated protein K DUF4407 PF14362.6 ORF13546 - 4.1 6.7 16.1 0.3 10.4 6.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF3450 PF11932.8 ORF13546 - 4.5 6.5 16.1 6.9 5.9 16.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) AAA_13 PF13166.6 ORF13546 - 4.8 5.7 12.5 18 3.8 12.5 1.7 1 1 0 1 1 1 0 AAA domain Exonuc_VII_L PF02601.15 ORF13546 - 5.3 6.5 10.3 6.9 6.1 10.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Seryl_tRNA_N PF02403.22 ORF13546 - 5.6 7.2 15.1 37 4.6 15.2 2.0 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain COX3 PF00510.18 ORF12654 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III ABA_GPCR PF12430.8 ORF12220 - 0.00053 19.8 2.1 0.00087 19.1 2.1 1.3 1 0 0 1 1 1 1 Abscisic acid G-protein coupled receptor DUF2070 PF09843.9 ORF12220 - 0.94 7.7 8.0 1.2 7.4 8.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Flp_N PF03930.14 ORF109875 - 0.14 12.1 1.4 12 5.9 0.3 2.6 2 1 1 3 3 3 0 Recombinase Flp protein N-terminus COX3 PF00510.18 ORF109693 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III zf-PARP PF00645.18 ORF108905 - 5.3e-20 72.1 1.6 5.3e-20 72.1 1.6 2.3 3 0 0 3 3 3 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region PADR1 PF08063.12 ORF108905 - 1.7e-07 30.9 0.9 7.2e-07 28.9 0.0 2.1 2 0 0 2 2 2 1 PADR1 (NUC008) domain SAP PF02037.27 ORF108905 - 4.6e-05 23.0 0.3 0.00017 21.3 0.2 2.0 1 1 0 1 1 1 1 SAP domain DUF4065 PF13274.6 ORF108905 - 0.033 15.1 0.7 0.11 13.3 0.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4065) Zn_Tnp_IS1595 PF12760.7 ORF108905 - 0.054 13.5 5.1 0.19 11.8 0.0 3.1 3 0 0 3 3 3 0 Transposase zinc-ribbon domain HTH_38 PF13936.6 ORF108905 - 0.15 11.9 0.1 0.28 11.0 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Zn-ribbon_8 PF09723.10 ORF108905 - 0.79 9.9 3.6 24 5.2 0.1 3.0 3 0 0 3 3 3 0 Zinc ribbon domain ABC_tran PF00005.27 ORF10627 - 5.7e-08 33.4 0.6 5.7e-08 33.4 0.6 2.1 2 1 0 2 2 2 1 ABC transporter RsgA_GTPase PF03193.16 ORF10627 - 0.011 15.6 0.0 0.023 14.6 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 ORF10627 - 0.063 13.0 0.2 0.17 11.6 0.2 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 ORF10627 - 0.093 13.0 1.1 0.19 11.9 1.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF10627 - 0.38 11.3 4.5 9.9 6.7 3.1 2.5 2 0 0 2 2 2 0 AAA domain COX3 PF00510.18 ORF104885 - 7.6e-18 65.3 25.1 8.5e-18 65.1 25.1 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III TPR_2 PF07719.17 ORF10383 - 2.2e-18 64.8 0.5 4.9e-07 29.4 0.2 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF10383 - 2.6e-15 55.5 0.6 3.8e-05 23.3 0.1 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF10383 - 3.3e-11 42.5 0.3 0.00064 19.7 0.0 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF10383 - 6.1e-08 33.1 0.1 0.0035 17.8 0.1 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF10383 - 1.5e-07 31.9 0.3 0.00029 21.4 0.0 2.9 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF10383 - 1.5e-07 31.6 1.1 0.039 14.8 0.0 3.8 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 ORF10383 - 3.6e-07 29.8 0.1 0.017 14.8 0.2 3.5 1 1 2 3 3 3 3 TPR repeat TPR_6 PF13174.6 ORF10383 - 4.4e-07 30.1 0.1 0.028 15.0 0.0 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF10383 - 1.4e-06 28.5 2.0 3e-05 24.2 0.2 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF10383 - 7.2e-05 22.9 0.0 0.4 11.2 0.1 3.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF10383 - 0.00061 19.6 0.4 2.1 8.6 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF10383 - 0.00062 19.9 0.8 0.00062 19.9 0.8 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 ORF10383 - 0.00063 19.5 0.1 0.21 11.5 0.0 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF10383 - 0.0014 18.7 0.3 0.0044 17.1 0.2 1.8 1 1 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF10383 - 0.01 15.9 0.2 0.094 12.8 0.0 2.2 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat DUF627 PF04781.12 ORF10383 - 0.025 14.6 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF627) DUF4811 PF16069.5 ORF103244 - 0.21 11.4 0.1 0.42 10.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) Senescence_reg PF04520.13 ORF101582 - 0.054 14.3 0.1 0.077 13.8 0.1 1.1 1 0 0 1 1 1 0 Senescence regulator HD_3 PF13023.6 NODE_27878_length_772_cov_2.496608_g21905_i0forward_frame_1 - 0.063 13.2 0.8 0.1 12.5 0.8 1.4 1 0 0 1 1 1 0 HD domain UL17 PF17640.2 NODE_27838_length_773_cov_3.823848_g21869_i0forward_frame_1 - 0.25 11.4 3.9 0.72 9.9 3.9 1.9 1 0 0 1 1 1 0 Uncharacterized UL17 DUF4419 PF14388.6 NODE_27838_length_773_cov_3.823848_g21869_i0forward_frame_1 - 0.27 10.6 0.0 0.38 10.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4419) Alkyl_sulf_dimr PF14863.6 NODE_27784_length_774_cov_4.098782_g21825_i0reverse_frame_1 - 2.4e-55 186.8 1.0 3.3e-55 186.3 1.0 1.2 1 0 0 1 1 1 1 Alkyl sulfatase dimerisation Alkyl_sulf_C PF14864.6 NODE_27784_length_774_cov_4.098782_g21825_i0reverse_frame_1 - 9e-21 74.5 0.1 1.4e-20 73.9 0.1 1.3 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal TPR_16 PF13432.6 NODE_27784_length_774_cov_4.098782_g21825_i0reverse_frame_1 - 0.12 13.0 0.6 0.27 11.9 0.3 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat PPR_2 PF13041.6 NODE_27776_length_774_cov_108.769959_g21817_i0forward_frame_1 - 7.9e-29 99.6 0.0 1.6e-07 31.4 0.0 5.6 2 2 4 6 6 6 6 PPR repeat family PPR PF01535.20 NODE_27776_length_774_cov_108.769959_g21817_i0forward_frame_1 - 4.6e-18 64.1 0.0 0.019 15.2 0.0 6.1 6 0 0 6 6 6 4 PPR repeat PPR_3 PF13812.6 NODE_27776_length_774_cov_108.769959_g21817_i0forward_frame_1 - 5e-15 55.3 0.0 0.00074 19.5 0.0 4.1 3 1 1 4 4 4 4 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_27776_length_774_cov_108.769959_g21817_i0forward_frame_1 - 8.3e-08 31.8 0.5 0.94 9.2 0.0 6.3 8 0 0 8 8 8 2 PPR repeat PPR_long PF17177.4 NODE_27776_length_774_cov_108.769959_g21817_i0forward_frame_1 - 4.4e-06 26.2 0.1 0.00093 18.6 0.0 2.7 1 1 2 3 3 3 2 Pentacotripeptide-repeat region of PRORP TPR_7 PF13176.6 NODE_27776_length_774_cov_108.769959_g21817_i0forward_frame_1 - 0.0059 16.5 0.3 24 5.3 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_27776_length_774_cov_108.769959_g21817_i0forward_frame_1 - 0.081 13.5 0.7 0.61 10.6 0.2 2.5 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_27776_length_774_cov_108.769959_g21817_i0forward_frame_1 - 0.26 12.2 9.6 1.3 10.1 0.0 4.3 5 1 1 6 6 6 0 Tetratricopeptide repeat Spc7_C2 PF15577.6 NODE_27776_length_774_cov_108.769959_g21817_i0forward_frame_1 - 0.32 11.1 2.5 20 5.4 0.0 3.4 4 0 0 4 4 4 0 Spc7_C2 YEATS PF03366.16 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 1.1e-19 70.1 2.2 2e-19 69.3 2.2 1.4 1 0 0 1 1 1 1 YEATS family zf-C3HC4_2 PF13923.6 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 8.6e-07 28.7 9.6 1.4e-06 28.0 9.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 8e-06 25.6 7.9 1.2e-05 25.1 7.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 6.7e-05 22.8 4.3 6.7e-05 22.8 4.3 2.2 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 7.1e-05 22.6 11.1 0.00013 21.8 11.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 0.00018 21.8 8.8 0.0003 21.1 8.8 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_4 PF15227.6 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 0.0085 16.2 10.3 0.017 15.3 10.3 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING U-box PF04564.15 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 0.012 15.8 0.1 0.028 14.6 0.1 1.6 1 0 0 1 1 1 0 U-box domain zf-rbx1 PF12678.7 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 0.028 14.7 7.5 0.075 13.3 7.5 1.7 1 1 0 1 1 1 0 RING-H2 zinc finger domain DUF1057 PF06342.12 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 0.066 12.2 0.2 0.098 11.7 0.2 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) zf-RING_5 PF14634.6 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 0.072 13.1 12.2 0.13 12.3 12.2 1.4 1 0 0 1 1 1 0 zinc-RING finger domain zf-RING_6 PF14835.6 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 0.076 12.9 2.8 0.14 12.1 2.8 1.3 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Prok-RING_4 PF14447.6 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 0.1 12.4 8.7 0.18 11.7 8.7 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 NODE_27772_length_774_cov_123.456022_g21814_i0forward_frame_1 - 7 6.5 9.6 0.22 11.3 2.1 2.2 2 0 0 2 2 2 0 RING-like zinc finger PRD PF00874.20 NODE_27746_length_775_cov_2.552703_g21791_i0reverse_frame_2 - 0.025 14.8 2.4 0.5 10.7 0.1 2.6 2 1 0 2 2 2 0 PRD domain DUF1462 PF07315.11 NODE_27746_length_775_cov_2.552703_g21791_i0reverse_frame_2 - 0.05 13.9 0.6 0.21 11.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1462) UPF0093 PF03653.13 NODE_27701_length_776_cov_2.653171_g21749_i0reverse_frame_3 - 0.0026 18.0 1.8 0.0042 17.3 1.8 1.4 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0093) HMG_box PF00505.19 NODE_27701_length_776_cov_2.653171_g21749_i0forward_frame_2 - 0.0048 17.3 1.0 0.017 15.5 1.0 1.9 1 1 0 1 1 1 1 HMG (high mobility group) box Bac_DnaA_C PF08299.11 NODE_27701_length_776_cov_2.653171_g21749_i0forward_frame_2 - 0.047 13.7 0.1 0.096 12.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix DUF2175 PF09943.9 NODE_27701_length_776_cov_2.653171_g21749_i0forward_frame_2 - 0.056 13.7 1.6 0.096 13.0 0.4 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) EAL PF00563.20 NODE_27699_length_776_cov_3.322537_g21747_i0forward_frame_2 - 7.3e-39 133.7 0.1 8.9e-39 133.4 0.1 1.1 1 0 0 1 1 1 1 EAL domain CSS-motif PF12792.7 NODE_27699_length_776_cov_3.322537_g21747_i0forward_frame_2 - 0.0016 18.0 0.0 0.0029 17.1 0.0 1.4 1 0 0 1 1 1 1 CSS motif domain associated with EAL stn_TNFRSF12A PF12191.8 NODE_27699_length_776_cov_3.322537_g21747_i0forward_frame_2 - 0.044 14.0 0.0 0.075 13.3 0.0 1.3 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks67.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks67.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks67.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks67.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PCMT PF01135.19 NODE_27694_length_776_cov_61.489879_g21742_i0forward_frame_2 - 0.00013 21.8 0.0 0.00014 21.6 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 NODE_27694_length_776_cov_61.489879_g21742_i0forward_frame_2 - 0.00092 19.1 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_27694_length_776_cov_61.489879_g21742_i0forward_frame_2 - 0.0031 18.2 0.1 0.0074 17.0 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 NODE_27694_length_776_cov_61.489879_g21742_i0forward_frame_2 - 0.068 12.6 0.1 0.092 12.1 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Med26 PF08711.11 NODE_27676_length_776_cov_426.998650_g21131_i1reverse_frame_3 - 0.014 15.4 0.0 0.014 15.4 0.0 2.3 2 1 0 2 2 2 0 TFIIS helical bundle-like domain CRAL_TRIO PF00650.20 NODE_27665_length_777_cov_46.700809_g21723_i0forward_frame_3 - 2.1e-07 30.8 0.3 3.5e-07 30.1 0.3 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain fn3 PF00041.21 NODE_27652_length_777_cov_106.597035_g21710_i0forward_frame_2 - 3.9e-06 27.1 4.1 0.019 15.3 0.1 3.5 3 1 0 3 3 3 2 Fibronectin type III domain Phage-tail_1 PF09097.10 NODE_27652_length_777_cov_106.597035_g21710_i0forward_frame_2 - 0.08 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Baseplate structural protein, domain 1 Ion_trans PF00520.31 ORF98611 - 6.3e-16 58.3 16.8 7.9e-16 58.0 16.8 1.1 1 0 0 1 1 1 1 Ion transport protein PCNA_N PF00705.18 ORF97360 - 8.3e-46 154.8 2.8 1.6e-45 153.9 0.5 2.2 3 0 0 3 3 3 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 ORF97360 - 4.8e-37 127.0 3.4 1.3e-35 122.3 0.2 2.7 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 ORF97360 - 2e-09 37.3 0.9 2.5e-09 37.0 0.9 1.2 1 0 0 1 1 1 1 Rad9 Rad1 PF02144.16 ORF97360 - 7.4e-06 25.2 4.2 6.5e-05 22.1 4.2 1.9 1 1 0 1 1 1 1 Repair protein Rad1/Rec1/Rad17 Hus1 PF04005.12 ORF97360 - 0.017 14.2 0.3 0.067 12.3 0.3 2.0 1 1 0 1 1 1 0 Hus1-like protein SsgA PF04686.12 ORF97360 - 0.097 12.7 0.0 0.29 11.2 0.0 1.9 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA DUF4886 PF16227.5 ORF97360 - 0.13 11.4 0.0 0.23 10.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4886) ERM PF00769.19 ORF94743 - 0.00023 21.1 0.8 0.00023 21.1 0.8 1.6 2 0 0 2 2 2 1 Ezrin/radixin/moesin family TPR_MLP1_2 PF07926.12 ORF94743 - 0.4 10.7 6.7 0.47 10.5 4.8 2.2 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF563 PF04577.14 ORF90382 - 4.1e-11 43.4 0.1 6.5e-11 42.8 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF563) HELP PF03451.14 ORF89903 - 0.0015 18.4 0.2 0.003 17.4 0.2 1.5 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF89903 - 0.043 14.7 0.2 2.3e+02 2.9 0.0 4.2 4 0 0 4 4 4 0 WD domain, G-beta repeat Glyco_hydro_31 PF01055.26 ORF80649 - 8.4e-19 68.1 0.3 1.2e-18 67.6 0.3 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF80649 - 0.0047 17.2 0.1 0.012 15.9 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) S_locus_glycop PF00954.20 ORF80350 - 0.31 11.6 3.1 0.63 10.6 0.5 2.5 2 1 1 3 3 3 0 S-locus glycoprotein domain AP_endonuc_2 PF01261.24 ORF8003 - 1.8e-33 115.7 0.9 2.2e-33 115.5 0.9 1.0 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Glyco_hydro_31 PF01055.26 ORF79896 - 7.4e-20 71.5 0.6 2.1e-19 70.1 0.1 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF79896 - 0.00098 19.3 0.2 0.0027 17.9 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) DUF5023 PF16426.5 ORF79818 - 0.016 14.9 0.1 0.024 14.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5023) VanZ PF04892.12 ORF79818 - 0.053 14.2 0.0 0.091 13.4 0.0 1.4 1 0 0 1 1 1 0 VanZ like family Glyco_hydro_31 PF01055.26 ORF79524 - 8.4e-19 68.1 0.3 1.2e-18 67.6 0.3 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF79524 - 0.0046 17.2 0.1 0.012 15.9 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) FliMN_C PF01052.20 ORF79524 - 0.091 12.8 0.0 1.9 8.6 0.0 2.2 2 0 0 2 2 2 0 Type III flagellar switch regulator (C-ring) FliN C-term Ion_trans PF00520.31 ORF77288 - 0.00012 21.4 12.3 0.00012 21.4 12.3 2.6 1 1 0 2 2 2 2 Ion transport protein Pho86 PF11124.8 ORF77288 - 4.9 6.5 8.1 4.8 6.6 0.1 2.2 2 0 0 2 2 2 0 Inorganic phosphate transporter Pho86 Selenoprotein_S PF06936.11 ORF77185 - 9.7 6.0 13.1 15 5.3 13.1 1.4 1 0 0 1 1 1 0 Selenoprotein S (SelS) Glyco_hydro_31 PF01055.26 ORF76412 - 7.4e-20 71.5 0.6 2.1e-19 70.1 0.1 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF76412 - 0.00098 19.3 0.2 0.0027 17.9 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Glyco_hydro_31 PF01055.26 ORF76405 - 7.4e-20 71.5 0.6 2.1e-19 70.1 0.1 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF76405 - 0.00098 19.3 0.2 0.0027 17.9 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) DUF5023 PF16426.5 ORF75906 - 0.016 14.9 0.1 0.024 14.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5023) VanZ PF04892.12 ORF75906 - 0.053 14.2 0.0 0.091 13.4 0.0 1.4 1 0 0 1 1 1 0 VanZ like family Actin PF00022.19 ORF74959 - 6.6e-89 298.3 0.0 3.3e-88 296.1 0.0 1.8 1 1 0 1 1 1 1 Actin DUF1298 PF06974.13 ORF73204 - 0.00052 20.0 0.0 0.00084 19.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) SBP_bac_6 PF13343.6 ORF73204 - 0.1 12.0 0.0 2 7.8 0.0 2.4 3 0 0 3 3 3 0 Bacterial extracellular solute-binding protein EF-hand_6 PF13405.6 ORF71086 - 8.1e-24 81.5 2.9 4.6e-05 23.0 0.0 5.3 5 0 0 5 5 5 5 EF-hand domain EF-hand_1 PF00036.32 ORF71086 - 9.1e-24 81.2 4.2 6.5e-05 22.2 0.0 5.3 5 0 0 5 5 5 5 EF hand EF-hand_7 PF13499.6 ORF71086 - 1.1e-23 83.4 0.9 1.3e-09 38.3 0.0 3.4 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF71086 - 1e-21 75.4 5.5 2.3e-06 26.9 0.0 5.4 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF71086 - 7.1e-10 38.6 3.3 0.28 11.0 0.0 5.3 3 1 2 5 5 5 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF71086 - 7.6e-05 23.0 0.9 0.04 14.2 0.0 3.8 2 1 3 5 5 5 3 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF71086 - 0.0051 17.1 0.0 18 5.7 0.0 4.0 2 1 2 4 4 4 1 EF-hand domain EF-hand_4 PF12763.7 ORF71086 - 2.3 8.2 4.4 36 4.4 0.0 3.8 2 1 3 5 5 5 0 Cytoskeletal-regulatory complex EF hand DUF4795 PF16043.5 ORF65420 - 0.00062 19.4 4.0 0.00099 18.8 3.9 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4795) Filament PF00038.21 ORF65420 - 0.002 17.8 6.4 0.59 9.7 0.4 3.0 2 1 1 3 3 3 3 Intermediate filament protein DHC_N2 PF08393.13 ORF65420 - 0.0046 16.1 4.0 0.037 13.1 4.0 2.0 1 1 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 Rootletin PF15035.6 ORF65420 - 0.017 15.2 6.2 1.4 8.9 0.0 3.1 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion XhlA PF10779.9 ORF65420 - 0.056 13.7 3.2 6.3 7.1 0.1 3.8 4 0 0 4 4 4 0 Haemolysin XhlA DUF1664 PF07889.12 ORF65420 - 0.09 12.8 6.0 0.45 10.6 0.3 3.3 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) Lectin_N PF03954.14 ORF65420 - 0.18 11.6 2.6 5.2 6.8 0.1 3.1 2 1 1 3 3 3 0 Hepatic lectin, N-terminal domain DUF883 PF05957.13 ORF65420 - 1.2 9.7 8.9 0.2 12.3 2.0 2.9 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF2937 PF11157.8 ORF64695 - 0.017 14.9 1.8 0.017 14.9 1.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2937) PPIP5K2_N PF18086.1 ORF64695 - 0.081 13.1 0.9 0.64 10.2 0.1 2.5 1 1 0 2 2 2 0 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain VSP PF03302.13 ORF6269 - 1.4e-07 30.7 74.7 0.0015 17.4 26.2 4.4 1 1 3 4 4 4 4 Giardia variant-specific surface protein Mito_carr PF00153.27 ORF6057 - 1e-57 192.0 2.5 9.4e-23 80.0 0.3 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein EF-hand_1 PF00036.32 ORF58968 - 2.5e-23 79.8 17.0 4.5e-08 32.1 0.0 4.4 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF58968 - 1.4e-19 68.3 12.4 6e-08 32.0 0.0 4.6 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF58968 - 8.4e-17 61.4 12.9 3.3e-11 43.5 0.2 3.2 2 1 3 5 5 5 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF58968 - 1.2e-15 56.2 14.9 7.2e-05 22.1 1.2 4.5 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF58968 - 2.2e-14 53.1 13.9 6.1e-10 38.8 0.1 4.8 4 1 1 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF58968 - 1.6e-05 25.2 3.9 0.043 14.1 1.0 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EnY2 PF10163.9 ORF58968 - 0.00019 21.7 0.1 0.0021 18.4 0.0 2.4 2 2 0 2 2 2 1 Transcription factor e(y)2 EF-hand_11 PF08976.11 ORF58968 - 0.0016 19.3 1.1 0.24 12.3 0.2 3.0 2 1 1 3 3 3 1 EF-hand domain DUF5580 PF17743.1 ORF58968 - 0.0042 15.7 0.3 0.0053 15.4 0.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5580) Caleosin PF05042.13 ORF58968 - 0.0084 16.0 0.3 0.059 13.3 0.2 2.6 1 1 0 1 1 1 1 Caleosin related protein DUF1002 PF06207.11 ORF58968 - 0.053 13.1 1.5 0.17 11.4 0.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1002) Erf4 PF10256.9 ORF58968 - 0.1 12.7 0.7 2.9 8.0 0.7 2.6 1 1 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family Rota_NSP4 PF01452.16 ORF58968 - 0.16 11.6 2.3 5.4 6.7 0.1 2.2 2 0 0 2 2 2 0 Rotavirus non structural protein L31 PF09784.9 ORF58968 - 0.41 11.1 8.9 3.5 8.1 1.9 2.7 2 1 1 3 3 2 0 Mitochondrial ribosomal protein L31 EF-hand_4 PF12763.7 ORF58968 - 0.82 9.6 12.2 3.4 7.7 0.2 4.2 2 1 3 5 5 5 0 Cytoskeletal-regulatory complex EF hand Rrn6 PF10214.9 ORF58208 - 0.053 12.0 1.6 0.075 11.5 1.6 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Glyco_hydro_31 PF01055.26 ORF57115 - 7.4e-20 71.5 0.6 2.1e-19 70.1 0.1 1.7 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF57115 - 0.00098 19.3 0.2 0.0027 17.9 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) LRR_6 PF13516.6 ORF55881 - 5.3e-05 22.9 5.5 0.051 13.6 0.1 3.1 3 0 0 3 3 3 2 Leucine Rich repeat LRR_8 PF13855.6 ORF55881 - 0.013 15.2 1.2 0.33 10.8 0.1 3.1 2 0 0 2 2 2 0 Leucine rich repeat LRR_4 PF12799.7 ORF55881 - 0.37 11.3 0.3 0.37 11.3 0.3 4.1 3 2 1 4 4 4 0 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF55881 - 2.6 8.9 6.6 3.7 8.5 0.2 3.8 4 0 0 4 4 4 0 Leucine Rich Repeat Lipase_GDSL_2 PF13472.6 ORF55486 - 0.00028 21.3 0.0 0.00037 20.9 0.0 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 ORF55486 - 0.0081 16.2 0.0 0.012 15.6 0.0 1.3 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase NAF PF03822.14 ORF55486 - 0.05 13.8 0.1 0.19 11.9 0.1 2.0 1 0 0 1 1 1 0 NAF domain Tex_N PF09371.10 ORF5288 - 0.05 13.3 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Tex-like protein N-terminal domain Occludin_ELL PF07303.13 ORF52623 - 5e-05 24.0 4.0 0.0023 18.6 2.5 2.4 2 0 0 2 2 2 1 Occludin homology domain DUF4446 PF14584.6 ORF52623 - 0.0053 16.8 4.0 1.2 9.2 2.2 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF4446) Fib_alpha PF08702.10 ORF52623 - 0.0061 16.8 1.2 0.05 13.8 0.6 2.2 2 0 0 2 2 2 1 Fibrinogen alpha/beta chain family Spc7 PF08317.11 ORF52623 - 0.013 14.5 10.3 0.096 11.6 6.9 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF16 PF01519.16 ORF52623 - 0.015 15.8 5.2 3 8.4 0.1 3.1 2 1 1 3 3 3 0 Protein of unknown function DUF16 PI3K_P85_iSH2 PF16454.5 ORF52623 - 0.016 14.8 8.4 0.026 14.1 4.4 2.4 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain RmuC PF02646.16 ORF52623 - 0.017 14.2 0.6 0.5 9.4 0.3 2.2 2 0 0 2 2 2 0 RmuC family DUF4735 PF15882.5 ORF52623 - 0.018 14.5 0.3 1.4 8.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4735) SH3BP5 PF05276.14 ORF52623 - 0.024 14.5 7.5 1 9.1 1.7 2.5 2 1 0 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) FH2 PF02181.23 ORF52623 - 0.034 13.3 4.9 0.75 8.9 1.9 2.1 2 0 0 2 2 2 0 Formin Homology 2 Domain Mod_r PF07200.13 ORF52623 - 0.036 14.2 10.6 0.48 10.5 6.7 2.2 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Seryl_tRNA_N PF02403.22 ORF52623 - 0.047 13.9 8.8 2.3 8.5 0.3 3.2 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain SlyX PF04102.12 ORF52623 - 0.055 14.1 15.2 0.69 10.6 2.5 3.6 2 1 1 3 3 3 0 SlyX BLOC1_2 PF10046.9 ORF52623 - 0.057 13.7 5.1 0.086 13.1 2.0 2.4 3 0 0 3 3 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Laminin_II PF06009.12 ORF52623 - 0.07 13.1 4.2 0.067 13.2 1.6 2.1 2 0 0 2 2 2 0 Laminin Domain II AATF-Che1 PF13339.6 ORF52623 - 0.08 13.6 6.7 0.45 11.2 0.1 2.3 1 1 0 2 2 2 0 Apoptosis antagonizing transcription factor Sun2_CC2 PF18580.1 ORF52623 - 0.099 12.9 2.6 4 7.7 0.0 3.4 3 0 0 3 3 3 0 SUN2 coiled coil domain 2 EzrA PF06160.12 ORF52623 - 0.12 10.5 5.4 0.13 10.4 3.0 1.9 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA Uds1 PF15456.6 ORF52623 - 0.16 12.2 11.7 0.72 10.0 6.0 3.0 3 0 0 3 3 3 0 Up-regulated During Septation DUF1664 PF07889.12 ORF52623 - 0.2 11.7 3.3 0.37 10.8 0.9 2.3 3 0 0 3 3 2 0 Protein of unknown function (DUF1664) Snapin_Pallidin PF14712.6 ORF52623 - 0.21 12.1 9.7 2.3 8.7 3.9 3.1 3 0 0 3 3 3 0 Snapin/Pallidin PEARLI-4 PF05278.12 ORF52623 - 0.27 10.8 7.0 0.59 9.7 3.7 2.2 2 0 0 2 2 2 0 Arabidopsis phospholipase-like protein (PEARLI 4) EMP24_GP25L PF01105.24 ORF52623 - 0.29 11.0 2.9 2.1 8.3 1.6 2.1 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD ATG16 PF08614.11 ORF52623 - 0.42 10.8 20.6 0.28 11.4 9.1 2.7 2 1 0 3 3 3 0 Autophagy protein 16 (ATG16) Vps5 PF09325.10 ORF52623 - 0.42 10.1 6.2 3.9 6.9 2.9 2.2 2 0 0 2 2 2 0 Vps5 C terminal like FemAB PF02388.16 ORF52623 - 0.6 8.9 4.9 1.6 7.5 1.4 2.0 2 0 0 2 2 2 0 FemAB family TMPIT PF07851.13 ORF52623 - 0.82 8.9 5.9 1.3 8.2 3.0 2.0 2 0 0 2 2 2 0 TMPIT-like protein Syntaxin-6_N PF09177.11 ORF52623 - 0.93 10.1 5.8 0.98 10.0 2.7 2.1 2 0 0 2 2 2 0 Syntaxin 6, N-terminal HemX PF04375.14 ORF52623 - 1.2 8.4 8.5 2.9 7.1 4.7 2.2 2 1 0 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase XhlA PF10779.9 ORF52623 - 1.2 9.4 6.0 0.98 9.7 2.0 2.5 3 0 0 3 3 2 0 Haemolysin XhlA AAA_13 PF13166.6 ORF52623 - 1.3 7.6 4.5 0.72 8.4 1.6 1.9 2 0 0 2 2 2 0 AAA domain Spc24 PF08286.11 ORF52623 - 1.6 9.1 7.5 2.5 8.4 3.6 2.7 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 Spc29 PF17082.5 ORF52623 - 1.7 8.4 6.1 6.8 6.5 5.0 2.4 1 1 1 2 2 2 0 Spindle Pole Component 29 Shugoshin_N PF07558.11 ORF52623 - 1.9 8.4 4.7 44 4.1 0.2 3.3 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region TelA PF05816.11 ORF52623 - 2.6 7.0 8.5 1.3 8.0 4.9 1.9 2 0 0 2 2 2 0 Toxic anion resistance protein (TelA) Csm1_N PF18504.1 ORF52623 - 2.8 8.4 11.0 8.2 6.8 2.2 3.2 3 0 0 3 3 3 0 Csm1 N-terminal domain TPR_MLP1_2 PF07926.12 ORF52623 - 3.1 7.9 16.0 2.8 8.0 0.2 2.9 3 0 0 3 3 3 0 TPR/MLP1/MLP2-like protein Med9 PF07544.13 ORF52623 - 3.8 7.7 11.5 1.5 8.9 0.1 3.3 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DivIC PF04977.15 ORF52623 - 4.3 7.2 10.9 20 5.0 0.2 3.2 3 0 0 3 3 3 0 Septum formation initiator ABC_tran_CTD PF16326.5 ORF52623 - 4.5 7.6 14.0 8.3 6.7 0.4 3.2 3 0 0 3 3 3 0 ABC transporter C-terminal domain GAS PF13851.6 ORF52623 - 4.6 6.5 11.4 9.7 5.5 6.8 2.4 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding HIP1_clath_bdg PF16515.5 ORF52623 - 5.2 7.7 13.8 1.7 9.3 6.0 2.8 3 0 0 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 H-kinase_dim PF02895.14 ORF52623 - 6.1 7.3 6.9 3.4 8.1 1.3 2.8 3 0 0 3 3 3 0 Signal transducing histidine kinase, homodimeric domain Nup54 PF13874.6 ORF52623 - 6.8 6.8 12.5 16 5.6 9.0 2.4 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 Fzo_mitofusin PF04799.13 ORF52623 - 7.3 6.1 7.9 5.7 6.5 3.6 2.4 2 1 1 3 3 3 0 fzo-like conserved region OmpH PF03938.14 ORF52623 - 7.8 6.8 11.1 51 4.2 6.9 2.5 2 1 0 2 2 2 0 Outer membrane protein (OmpH-like) ubiquitin PF00240.23 ORF50071 - 5.2e-05 22.9 0.1 0.00016 21.4 0.1 1.8 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF50071 - 0.0038 17.0 0.1 0.012 15.4 0.0 1.9 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like SPRY PF00622.28 ORF50071 - 0.073 13.2 0.0 0.12 12.5 0.0 1.3 1 1 0 1 1 1 0 SPRY domain FliMN_C PF01052.20 ORF50071 - 0.098 12.7 0.0 0.66 10.0 0.0 2.2 2 0 0 2 2 2 0 Type III flagellar switch regulator (C-ring) FliN C-term DUF2407 PF10302.9 ORF50071 - 0.15 12.7 0.0 0.22 12.1 0.0 1.3 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain CopD PF05425.13 ORF49876 - 0.011 16.1 3.2 0.011 16.1 3.2 2.3 2 2 0 2 2 2 0 Copper resistance protein D Cation_ATPase_C PF00689.21 ORF49876 - 0.43 10.3 10.1 1.2 8.9 10.1 1.9 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus CS PF04969.16 ORF47369 - 0.048 14.7 1.5 0.048 14.7 1.5 1.9 2 0 0 2 2 2 0 CS domain Occludin_ELL PF07303.13 ORF47203 - 5e-05 24.0 4.0 0.0023 18.6 2.5 2.4 2 0 0 2 2 2 1 Occludin homology domain DUF4446 PF14584.6 ORF47203 - 0.0053 16.8 4.0 1.2 9.2 2.2 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF4446) Fib_alpha PF08702.10 ORF47203 - 0.0061 16.8 1.2 0.05 13.8 0.6 2.2 2 0 0 2 2 2 1 Fibrinogen alpha/beta chain family Spc7 PF08317.11 ORF47203 - 0.013 14.5 10.3 0.096 11.6 6.9 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF16 PF01519.16 ORF47203 - 0.015 15.8 5.2 3 8.4 0.1 3.1 2 1 1 3 3 3 0 Protein of unknown function DUF16 PI3K_P85_iSH2 PF16454.5 ORF47203 - 0.016 14.8 8.4 0.026 14.1 4.4 2.4 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain RmuC PF02646.16 ORF47203 - 0.017 14.2 0.6 0.5 9.4 0.3 2.2 2 0 0 2 2 2 0 RmuC family DUF4735 PF15882.5 ORF47203 - 0.018 14.5 0.3 1.4 8.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4735) SH3BP5 PF05276.14 ORF47203 - 0.024 14.5 7.5 1 9.1 1.7 2.5 2 1 0 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) FH2 PF02181.23 ORF47203 - 0.034 13.3 4.9 0.75 8.9 1.9 2.1 2 0 0 2 2 2 0 Formin Homology 2 Domain Mod_r PF07200.13 ORF47203 - 0.036 14.2 10.6 0.48 10.5 6.7 2.2 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Seryl_tRNA_N PF02403.22 ORF47203 - 0.047 13.9 8.8 2.3 8.5 0.3 3.2 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain SlyX PF04102.12 ORF47203 - 0.055 14.1 15.2 0.69 10.6 2.5 3.6 2 1 1 3 3 3 0 SlyX BLOC1_2 PF10046.9 ORF47203 - 0.057 13.7 5.1 0.086 13.1 2.0 2.4 3 0 0 3 3 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Laminin_II PF06009.12 ORF47203 - 0.07 13.1 4.2 0.067 13.2 1.6 2.1 2 0 0 2 2 2 0 Laminin Domain II AATF-Che1 PF13339.6 ORF47203 - 0.08 13.6 6.7 0.45 11.2 0.1 2.3 1 1 0 2 2 2 0 Apoptosis antagonizing transcription factor Sun2_CC2 PF18580.1 ORF47203 - 0.099 12.9 2.6 4 7.7 0.0 3.4 3 0 0 3 3 3 0 SUN2 coiled coil domain 2 EzrA PF06160.12 ORF47203 - 0.12 10.5 5.4 0.13 10.4 3.0 1.9 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA Uds1 PF15456.6 ORF47203 - 0.16 12.2 11.7 0.72 10.0 6.0 3.0 3 0 0 3 3 3 0 Up-regulated During Septation DUF1664 PF07889.12 ORF47203 - 0.2 11.7 3.3 0.37 10.8 0.9 2.3 3 0 0 3 3 2 0 Protein of unknown function (DUF1664) Snapin_Pallidin PF14712.6 ORF47203 - 0.21 12.1 9.7 2.3 8.7 3.9 3.1 3 0 0 3 3 3 0 Snapin/Pallidin PEARLI-4 PF05278.12 ORF47203 - 0.27 10.8 7.0 0.59 9.7 3.7 2.2 2 0 0 2 2 2 0 Arabidopsis phospholipase-like protein (PEARLI 4) EMP24_GP25L PF01105.24 ORF47203 - 0.29 11.0 2.9 2.1 8.3 1.6 2.1 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD ATG16 PF08614.11 ORF47203 - 0.42 10.8 20.6 0.28 11.4 9.1 2.7 2 1 0 3 3 3 0 Autophagy protein 16 (ATG16) Vps5 PF09325.10 ORF47203 - 0.42 10.1 6.2 3.9 6.9 2.9 2.2 2 0 0 2 2 2 0 Vps5 C terminal like FemAB PF02388.16 ORF47203 - 0.6 8.9 4.9 1.6 7.5 1.4 2.0 2 0 0 2 2 2 0 FemAB family TMPIT PF07851.13 ORF47203 - 0.82 8.9 5.9 1.3 8.2 3.0 2.0 2 0 0 2 2 2 0 TMPIT-like protein Syntaxin-6_N PF09177.11 ORF47203 - 0.93 10.1 5.8 0.98 10.0 2.7 2.1 2 0 0 2 2 2 0 Syntaxin 6, N-terminal HemX PF04375.14 ORF47203 - 1.2 8.4 8.5 2.9 7.1 4.7 2.2 2 1 0 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase XhlA PF10779.9 ORF47203 - 1.2 9.4 6.0 0.98 9.7 2.0 2.5 3 0 0 3 3 2 0 Haemolysin XhlA AAA_13 PF13166.6 ORF47203 - 1.3 7.6 4.5 0.72 8.4 1.6 1.9 2 0 0 2 2 2 0 AAA domain Spc24 PF08286.11 ORF47203 - 1.6 9.1 7.5 2.5 8.4 3.6 2.7 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 Spc29 PF17082.5 ORF47203 - 1.7 8.4 6.1 6.8 6.5 5.0 2.4 1 1 1 2 2 2 0 Spindle Pole Component 29 Shugoshin_N PF07558.11 ORF47203 - 1.9 8.4 4.7 44 4.1 0.2 3.3 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region TelA PF05816.11 ORF47203 - 2.6 7.0 8.5 1.3 8.0 4.9 1.9 2 0 0 2 2 2 0 Toxic anion resistance protein (TelA) Csm1_N PF18504.1 ORF47203 - 2.8 8.4 11.0 8.2 6.8 2.2 3.2 3 0 0 3 3 3 0 Csm1 N-terminal domain TPR_MLP1_2 PF07926.12 ORF47203 - 3.1 7.9 16.0 2.8 8.0 0.2 2.9 3 0 0 3 3 3 0 TPR/MLP1/MLP2-like protein Med9 PF07544.13 ORF47203 - 3.8 7.7 11.5 1.5 8.9 0.1 3.3 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DivIC PF04977.15 ORF47203 - 4.3 7.2 10.9 20 5.0 0.2 3.2 3 0 0 3 3 3 0 Septum formation initiator ABC_tran_CTD PF16326.5 ORF47203 - 4.5 7.6 14.0 8.3 6.7 0.4 3.2 3 0 0 3 3 3 0 ABC transporter C-terminal domain GAS PF13851.6 ORF47203 - 4.6 6.5 11.4 9.7 5.5 6.8 2.4 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding HIP1_clath_bdg PF16515.5 ORF47203 - 5.2 7.7 13.8 1.7 9.3 6.0 2.8 3 0 0 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 H-kinase_dim PF02895.14 ORF47203 - 6.1 7.3 6.9 3.4 8.1 1.3 2.8 3 0 0 3 3 3 0 Signal transducing histidine kinase, homodimeric domain Nup54 PF13874.6 ORF47203 - 6.8 6.8 12.5 16 5.6 9.0 2.4 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 Fzo_mitofusin PF04799.13 ORF47203 - 7.3 6.1 7.9 5.7 6.5 3.6 2.4 2 1 1 3 3 3 0 fzo-like conserved region OmpH PF03938.14 ORF47203 - 7.8 6.8 11.1 51 4.2 6.9 2.5 2 1 0 2 2 2 0 Outer membrane protein (OmpH-like) S_locus_glycop PF00954.20 ORF46895 - 0.31 11.6 3.1 0.63 10.6 0.5 2.5 2 1 1 3 3 3 0 S-locus glycoprotein domain LZ3wCH PF18517.1 ORF44489 - 0.12 12.4 0.5 0.24 11.5 0.5 1.4 1 0 0 1 1 1 0 Leucine zipper with capping helix domain DSPc PF00782.20 ORF44138 - 6.9e-15 55.0 0.0 9.6e-15 54.6 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF44138 - 0.00095 18.8 0.0 0.0012 18.4 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF44138 - 0.0038 17.4 0.0 0.0058 16.8 0.0 1.2 1 0 0 1 1 1 1 Inositol hexakisphosphate Init_tRNA_PT PF04179.12 ORF44138 - 0.15 12.4 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 Rit1 DUSP-like domain GST_N_3 PF13417.6 ORF42800 - 1e-15 57.9 0.0 3.8e-14 52.8 0.0 2.3 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF42800 - 1.4e-13 50.9 0.0 2.9e-13 49.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF42800 - 5.8e-10 39.4 0.1 0.00027 21.2 0.0 2.3 1 1 1 2 2 2 2 Glutathione S-transferase, N-terminal domain GST_C_5 PF16865.5 ORF42800 - 3.8e-06 27.4 0.0 6.6e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF42800 - 1.9e-05 24.6 0.6 3.4e-05 23.8 0.6 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF42800 - 0.00019 21.6 0.1 0.00033 20.8 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF42800 - 0.0002 21.5 0.0 0.00043 20.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF42800 - 0.0033 17.6 0.0 0.0086 16.3 0.0 1.7 2 0 0 2 2 2 1 Glutaredoxin GST_N_4 PF17172.4 ORF42800 - 0.029 15.1 0.0 0.23 12.2 0.0 2.1 2 0 0 2 2 2 0 Glutathione S-transferase N-terminal domain TPR_10 PF13374.6 ORF42741 - 1.4e-17 63.0 19.6 3.6e-05 23.5 0.0 5.7 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_12 PF13424.6 ORF42741 - 2.4e-15 56.5 22.4 5.1e-06 26.7 4.6 4.6 2 1 3 5 5 5 4 Tetratricopeptide repeat TPR_4 PF07721.14 ORF42741 - 0.00065 20.1 29.3 0.47 11.2 0.9 6.1 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF42741 - 0.0064 16.5 15.7 2.8 8.3 0.4 5.7 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF42741 - 0.0069 16.2 4.2 8.7 6.4 0.1 4.6 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF42741 - 0.063 13.8 21.3 0.82 10.2 0.9 5.3 2 1 3 5 5 5 0 Tetratricopeptide repeat TPR_5 PF12688.7 ORF42741 - 0.091 13.0 11.0 1.1 9.5 6.4 3.1 1 1 2 3 3 3 0 Tetratrico peptide repeat CSN5_C PF18323.1 ORF42741 - 0.098 13.6 0.7 0.15 13.0 0.1 1.7 2 0 0 2 2 1 0 Cop9 signalosome subunit 5 C-terminal domain TPR_8 PF13181.6 ORF42741 - 0.31 11.3 6.0 14 6.2 0.0 4.1 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF42741 - 0.54 10.9 26.0 0.94 10.2 1.0 5.7 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF42741 - 1.3 9.2 15.4 4.7 7.5 0.3 4.9 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF42741 - 8.4 7.5 28.1 1.4 10.0 1.6 6.0 4 2 1 6 6 6 0 Tetratricopeptide repeat TetR_C_10 PF16295.5 ORF40254 - 0.052 13.9 0.6 1.2 9.4 0.6 2.4 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain NinG PF05766.12 ORF40254 - 0.11 12.4 5.3 1.1 9.2 2.3 2.6 2 0 0 2 2 2 0 Bacteriophage Lambda NinG protein IRF PF00605.17 ORF40254 - 0.96 9.8 5.7 0.23 11.7 0.6 2.3 2 0 0 2 2 2 0 Interferon regulatory factor transcription factor Ribosomal_S25 PF03297.15 ORF40254 - 2 8.7 14.2 0.08 13.2 2.8 3.0 3 0 0 3 3 3 0 S25 ribosomal protein LRR_6 PF13516.6 ORF39905 - 0.062 13.4 19.7 0.28 11.3 0.0 5.9 7 0 0 7 7 7 0 Leucine Rich repeat fn3 PF00041.21 ORF39135 - 1.7e-24 86.0 0.0 3.4e-11 43.3 0.1 4.1 4 0 0 4 4 4 4 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 ORF39135 - 5.3e-09 36.5 0.0 0.00047 20.7 0.0 3.0 3 0 0 3 3 3 2 Purple acid Phosphatase, N-terminal domain DUF2369 PF10179.9 ORF39135 - 0.025 14.9 0.0 3.6 8.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2369) Y_Y_Y PF07495.13 ORF39135 - 0.075 13.0 0.0 6.6 6.8 0.0 2.9 3 0 0 3 3 3 0 Y_Y_Y domain C2 PF00168.30 ORF38357 - 1.9e-14 53.8 0.1 2.7e-14 53.3 0.1 1.2 1 0 0 1 1 1 1 C2 domain MAD PF05557.13 ORF37366 - 0.0011 17.4 20.1 0.0011 17.4 20.1 2.3 1 1 1 2 2 2 1 Mitotic checkpoint protein DUF724 PF05266.14 ORF37366 - 0.0047 16.8 22.0 0.034 14.0 13.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF724) Phage_lysis PF03245.13 ORF37366 - 0.021 14.9 0.7 0.021 14.9 0.7 3.2 2 1 0 2 2 2 0 Bacteriophage Rz lysis protein YabA PF06156.13 ORF37366 - 0.022 15.4 26.9 0.32 11.7 3.2 3.2 1 1 2 3 3 3 0 Initiation control protein YabA Filament PF00038.21 ORF37366 - 0.025 14.2 31.6 0.04 13.5 31.6 1.3 1 0 0 1 1 1 0 Intermediate filament protein GAS PF13851.6 ORF37366 - 0.036 13.4 33.8 0.019 14.3 20.3 2.4 1 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding ADIP PF11559.8 ORF37366 - 0.047 13.8 37.8 0.25 11.4 15.9 3.1 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding TMPIT PF07851.13 ORF37366 - 0.096 11.9 15.1 0.63 9.2 7.7 2.1 2 0 0 2 2 2 0 TMPIT-like protein PEPCK_N PF17297.2 ORF37366 - 0.22 11.1 0.9 0.35 10.4 0.9 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase N-terminal domain ApoO PF09769.9 ORF37366 - 0.22 11.5 0.1 0.22 11.5 0.1 2.8 2 1 0 2 2 2 0 Apolipoprotein O HMMR_C PF15908.5 ORF37366 - 0.23 11.7 26.4 0.6 10.4 5.7 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal KASH_CCD PF14662.6 ORF37366 - 0.33 10.8 36.3 0.9 9.3 4.6 2.3 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF4617 PF15395.6 ORF37366 - 0.38 9.0 16.6 0.47 8.7 16.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4617) DUF1664 PF07889.12 ORF37366 - 1 9.4 18.7 0.3 11.1 1.3 3.0 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Fez1 PF06818.15 ORF37366 - 2.3 8.7 35.2 5.2 7.5 22.3 2.1 1 1 1 2 2 2 0 Fez1 DUF3584 PF12128.8 ORF37366 - 2.3 5.6 34.3 3.3 5.1 34.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) HMMR_N PF15905.5 ORF37366 - 3.5 7.0 38.1 22 4.4 38.1 2.0 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Spectrin PF00435.21 ORF37366 - 3.7 8.1 28.5 0.77 10.3 7.9 3.5 2 1 1 3 3 3 0 Spectrin repeat Syntaxin-6_N PF09177.11 ORF37366 - 3.9 8.1 22.0 25 5.5 3.0 3.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Speriolin_N PF15058.6 ORF37366 - 6 6.9 8.4 2.5 8.1 4.0 2.5 2 1 0 2 2 2 0 Speriolin N terminus Laminin_II PF06009.12 ORF37366 - 8.3 6.4 20.2 40 4.2 13.2 3.0 1 1 1 2 2 2 0 Laminin Domain II CENP-F_leu_zip PF10473.9 ORF37366 - 8.7 6.4 38.8 0.31 11.1 18.3 3.3 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Atg14 PF10186.9 ORF36859 - 0.073 12.1 12.3 0.11 11.5 12.3 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 THDPS_N_2 PF14805.6 ORF36859 - 0.074 13.3 2.1 0.099 12.9 0.1 2.2 2 1 0 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal Macoilin PF09726.9 ORF36859 - 0.076 11.6 6.4 0.09 11.3 6.4 1.0 1 0 0 1 1 1 0 Macoilin family Spc7 PF08317.11 ORF36859 - 0.22 10.4 17.4 0.21 10.5 16.3 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein V_ATPase_I PF01496.19 ORF36859 - 1.1 7.0 7.9 1.4 6.8 7.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF730 PF05325.11 ORF36859 - 4.7 7.2 8.2 1.8 8.6 4.7 2.0 2 1 1 3 3 3 0 Protein of unknown function (DUF730) Med21 PF11221.8 ORF36859 - 5 7.4 12.6 0.29 11.4 6.4 1.8 2 0 0 2 2 2 0 Subunit 21 of Mediator complex Pkinase PF00069.25 ORF34466 - 1.6e-47 162.1 0.0 1.8e-47 161.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF34466 - 1.2e-37 129.6 0.0 1.5e-37 129.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF34466 - 2.3e-05 23.8 0.0 5.4e-05 22.7 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF34466 - 9.6e-05 21.3 0.0 0.00015 20.7 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF34466 - 0.033 14.1 0.1 0.062 13.2 0.1 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF34466 - 0.068 12.2 0.1 0.12 11.4 0.1 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 S_locus_glycop PF00954.20 ORF33785 - 0.31 11.6 3.1 0.63 10.6 0.5 2.5 2 1 1 3 3 3 0 S-locus glycoprotein domain Arg_decarb_HB PF17810.1 ORF31258 - 1.1e-22 80.0 0.4 2.5e-22 78.9 0.4 1.6 1 0 0 1 1 1 1 Arginine decarboxylase helical bundle domain Arg_decarbox_C PF17944.1 ORF31258 - 8.7e-17 61.4 2.3 8.7e-17 61.4 2.3 1.8 2 0 0 2 2 2 1 Arginine decarboxylase C-terminal helical extension Aldedh PF00171.22 ORF28255 - 1.6e-80 270.9 0.0 1.8e-80 270.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 ORF28255 - 0.18 11.2 0.0 1.8 7.9 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) DUF3298 PF11738.8 ORF25565 - 0.52 11.4 7.3 0.57 11.3 0.8 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3298) DUF2115 PF09888.9 ORF25565 - 4.3 7.8 6.5 0.72 10.4 2.2 1.9 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2115) DUF4718 PF15842.5 ORF25215 - 0.052 13.3 0.1 0.085 12.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) DZR PF12773.7 ORF23690 - 0.013 15.5 5.9 0.039 14.0 5.9 1.8 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF23690 - 0.032 15.0 3.4 0.056 14.2 3.4 1.5 1 1 0 1 1 1 0 zinc-ribbon family Phage_integrase PF00589.22 ORF23690 - 0.053 13.3 0.0 0.079 12.7 0.0 1.5 1 1 0 1 1 1 0 Phage integrase family HypA PF01155.19 ORF23690 - 0.091 12.8 1.1 0.15 12.1 1.1 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 ORF23690 - 2.9 7.8 7.1 16 5.4 0.6 2.5 1 1 0 2 2 2 0 zinc-ribbon domain Pkinase PF00069.25 ORF23282 - 1.6e-47 162.1 0.0 1.8e-47 161.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF23282 - 1.2e-37 129.6 0.0 1.5e-37 129.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF23282 - 2.3e-05 23.8 0.0 5.4e-05 22.7 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF23282 - 9.6e-05 21.3 0.0 0.00015 20.7 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF23282 - 0.033 14.1 0.1 0.062 13.2 0.1 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF23282 - 0.068 12.2 0.1 0.12 11.4 0.1 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 Pkinase PF00069.25 ORF20016 - 1.3e-44 152.6 0.4 1.7e-44 152.2 0.4 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF20016 - 4.7e-25 88.3 0.1 6.1e-25 88.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF20016 - 3.8e-05 23.4 0.2 0.071 12.7 0.3 2.2 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 DUF4301 PF14134.6 ORF18487 - 0.21 10.3 0.4 15 4.3 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4301) BRCT_2 PF16589.5 ORF18487 - 1.1 9.8 5.4 1 9.8 0.3 2.5 3 0 0 3 3 3 0 BRCT domain, a BRCA1 C-terminus domain MIR PF02815.19 ORF15373 - 0.0006 19.7 0.0 0.013 15.3 0.0 2.4 2 1 0 2 2 2 1 MIR domain MFS_1 PF07690.16 ORF14394 - 8.3e-14 51.3 32.6 1.3e-08 34.2 9.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily LrgB PF04172.16 ORF14130 - 5.8e-33 114.2 10.1 7.1e-33 113.9 10.1 1.1 1 0 0 1 1 1 1 LrgB-like family HD_2 PF12917.7 ORF1354 - 0.0098 15.7 0.1 0.015 15.0 0.1 1.3 1 0 0 1 1 1 1 HD containing hydrolase-like enzyme MerB PF03243.15 ORF1354 - 0.12 12.5 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Alkylmercury lyase V-set PF07686.17 ORF1354 - 0.21 11.8 1.5 0.85 9.8 0.3 2.3 1 1 1 2 2 2 0 Immunoglobulin V-set domain Rrn6 PF10214.9 ORF1119 - 0.058 11.9 1.8 0.083 11.4 1.8 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Exo_endo_phos PF03372.23 ORF110785 - 0.0049 16.4 0.1 0.0057 16.2 0.1 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family C2 PF00168.30 ORF110033 - 1.9e-14 53.8 0.1 2.7e-14 53.3 0.1 1.2 1 0 0 1 1 1 1 C2 domain TerD PF02342.18 ORF108977 - 0.004 16.7 0.0 0.013 15.0 0.0 1.7 2 0 0 2 2 2 1 TerD domain HSP70 PF00012.20 ORF106140 - 6.5e-57 193.1 0.8 7.4e-57 192.9 0.8 1.0 1 0 0 1 1 1 1 Hsp70 protein Prenyltransf PF01255.19 ORF106140 - 0.012 15.2 0.3 0.018 14.6 0.3 1.3 1 0 0 1 1 1 0 Putative undecaprenyl diphosphate synthase PCNA_C PF02747.15 ORF10554 - 1.1e-42 145.2 0.0 1.8e-40 138.0 0.0 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 ORF10554 - 2.6e-37 127.4 1.5 2.6e-37 127.4 1.5 1.5 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF10554 - 0.0001 21.9 0.2 0.00012 21.6 0.2 1.1 1 0 0 1 1 1 1 Rad9 zf-RING_2 PF13639.6 ORF100742 - 3.1e-05 24.2 11.3 7.4e-05 23.0 11.3 1.7 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF100742 - 0.00087 19.3 11.2 0.0087 16.1 6.0 2.5 2 0 0 2 2 2 1 RING-type zinc-finger IQ PF00612.27 ORF100742 - 0.0012 18.4 2.0 0.0036 17.0 2.0 1.8 1 0 0 1 1 1 1 IQ calmodulin-binding motif zf-RING_5 PF14634.6 ORF100742 - 0.0012 18.7 9.8 0.0029 17.5 9.8 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF100742 - 0.016 14.9 9.4 0.022 14.5 7.5 2.3 2 1 0 2 2 2 0 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF100742 - 0.022 14.8 6.3 0.057 13.5 6.3 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF100742 - 0.029 14.2 8.2 0.078 12.9 8.2 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF100742 - 0.15 12.0 7.9 0.72 9.8 8.3 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF100742 - 0.19 11.6 4.9 0.49 10.2 4.9 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-rbx1 PF12678.7 ORF100742 - 0.7 10.2 12.1 4.7 7.6 12.3 2.2 1 1 1 2 2 2 0 RING-H2 zinc finger domain FANCL_C PF11793.8 ORF100742 - 0.88 9.8 7.9 2.9 8.1 7.9 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF100742 - 1.4 8.8 12.4 0.49 10.3 6.0 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 Prok-RING_1 PF14446.6 ORF100742 - 4.1 7.4 8.4 12 6.0 2.7 2.5 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4_2 PF13923.6 ORF100742 - 5.5 6.9 14.2 1e+02 2.9 15.1 2.6 1 1 2 3 3 3 0 Zinc finger, C3HC4 type (RING finger) zf-WRNIP1_ubi PF18279.1 ORF100742 - 6.5 7.6 6.5 41 5.1 0.4 2.6 2 0 0 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain Zn-ribbon_8 PF09723.10 ORF100742 - 8.2 6.6 8.8 5.9 7.1 2.3 2.9 2 0 0 2 2 2 0 Zinc ribbon domain S_locus_glycop PF00954.20 ORF10034 - 0.31 11.6 3.1 0.63 10.6 0.5 2.5 2 1 1 3 3 3 0 S-locus glycoprotein domain GST_N_3 PF13417.6 NODE_27969_length_769_cov_3447.577657_g21977_i1forward_frame_1 - 1.2e-12 48.1 0.0 2.2e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 NODE_27969_length_769_cov_3447.577657_g21977_i1forward_frame_1 - 3e-12 46.6 0.2 5.5e-12 45.8 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 NODE_27969_length_769_cov_3447.577657_g21977_i1forward_frame_1 - 4.1e-08 33.4 0.0 7.3e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 NODE_27969_length_769_cov_3447.577657_g21977_i1forward_frame_1 - 1.2e-07 31.8 0.1 2.4e-07 30.8 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 NODE_27969_length_769_cov_3447.577657_g21977_i1forward_frame_1 - 4.7e-07 29.7 0.2 1.7e-06 28.0 0.2 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 NODE_27969_length_769_cov_3447.577657_g21977_i1forward_frame_1 - 7.4e-06 26.2 0.0 1.9e-05 24.8 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain APA3_viroporin PF11289.8 NODE_27968_length_769_cov_3580.670300_g19647_i1reverse_frame_1 - 5.8 6.4 6.1 0.43 10.1 0.5 1.9 3 0 0 3 3 3 0 Coronavirus accessory protein 3a ESP PF16590.5 NODE_27968_length_769_cov_3580.670300_g19647_i1forward_frame_1 - 0.056 13.7 0.1 0.086 13.1 0.1 1.3 1 0 0 1 1 1 0 Exocrine gland-secreting peptide GST_N_3 PF13417.6 NODE_27966_length_769_cov_5228.831063_g21977_i0reverse_frame_1 - 3.6e-13 49.7 0.0 7.1e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 NODE_27966_length_769_cov_5228.831063_g21977_i0reverse_frame_1 - 6.6e-12 45.5 0.1 1.2e-11 44.7 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 NODE_27966_length_769_cov_5228.831063_g21977_i0reverse_frame_1 - 3.8e-09 36.8 0.0 6.7e-09 36.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 NODE_27966_length_769_cov_5228.831063_g21977_i0reverse_frame_1 - 1.6e-07 31.5 0.0 4.1e-07 30.2 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 NODE_27966_length_769_cov_5228.831063_g21977_i0reverse_frame_1 - 2.4e-07 30.8 0.1 5e-07 29.8 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 NODE_27966_length_769_cov_5228.831063_g21977_i0reverse_frame_1 - 5.5e-07 29.5 0.1 2e-06 27.7 0.1 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 NODE_27966_length_769_cov_5228.831063_g21977_i0reverse_frame_1 - 0.043 14.0 0.0 0.08 13.2 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin Glutaredoxin2_C PF04399.13 NODE_27966_length_769_cov_5228.831063_g21977_i0reverse_frame_1 - 0.12 12.2 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain DUF5450 PF17529.2 NODE_27878_length_772_cov_2.496608_g21905_i0forward_frame_3 - 0.072 13.2 0.1 0.45 10.6 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5450) PX PF00787.24 NODE_27878_length_772_cov_2.496608_g21905_i0forward_frame_2 - 0.011 15.7 6.5 0.026 14.5 6.5 1.9 1 1 0 1 1 1 0 PX domain PhoLip_ATPase_C PF16212.5 NODE_27850_length_772_cov_380.706920_g21879_i0forward_frame_3 - 3.5e-22 79.4 16.2 4.7e-22 79.0 16.2 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Ras PF00071.22 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 5.6e-51 172.4 0.4 6.8e-51 172.1 0.4 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 1.5e-31 109.1 0.1 2.3e-31 108.5 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 1.5e-16 60.3 0.6 2e-16 59.9 0.6 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 2.4e-07 30.5 0.1 1.2e-06 28.2 0.1 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 4.7e-07 29.9 0.0 7e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 0.00011 21.7 0.2 0.00014 21.3 0.2 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 0.00025 21.0 0.5 0.014 15.4 0.2 2.2 2 0 0 2 2 2 1 RsgA GTPase DLIC PF05783.11 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 0.0014 17.6 0.1 0.0017 17.3 0.1 1.1 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) SRPRB PF09439.10 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 0.0016 17.9 0.1 0.0022 17.4 0.1 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit ATPase_2 PF01637.18 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 0.0051 16.8 2.2 0.012 15.5 2.0 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea PduV-EutP PF10662.9 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 0.0057 16.4 0.3 0.073 12.8 0.3 2.2 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation TniB PF05621.11 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 0.0073 15.7 0.1 0.026 14.0 0.0 1.9 2 0 0 2 2 2 1 Bacterial TniB protein MMR_HSR1_Xtn PF16897.5 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 0.01 15.8 0.4 0.022 14.8 0.4 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain FeoB_N PF02421.18 NODE_27846_length_772_cov_754.801900_g21875_i0reverse_frame_2 - 0.019 14.5 0.3 0.12 11.9 0.3 2.0 1 1 0 1 1 1 0 Ferrous iron transport protein B IF-2 PF11987.8 NODE_27838_length_773_cov_3.823848_g21869_i0forward_frame_2 - 2.6e-37 127.1 2.0 4.6e-37 126.3 2.0 1.4 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 NODE_27838_length_773_cov_3.823848_g21869_i0forward_frame_2 - 0.011 16.1 3.0 0.48 10.9 0.1 2.7 1 1 1 2 2 2 0 Elongation factor Tu domain 2 EphA2_TM PF14575.6 NODE_27836_length_773_cov_31.933604_g21867_i0reverse_frame_3 - 0.033 15.1 1.4 0.058 14.3 1.4 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF3311 PF11755.8 NODE_27836_length_773_cov_31.933604_g21867_i0reverse_frame_3 - 0.04 13.9 2.2 0.04 13.9 2.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3311) ECSCR PF15820.5 NODE_27836_length_773_cov_31.933604_g21867_i0reverse_frame_3 - 7.2 6.5 12.8 15 5.5 12.8 1.5 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Yip1 PF04893.17 NODE_27836_length_773_cov_31.933604_g21867_i0reverse_frame_2 - 0.0045 16.7 1.4 0.062 13.0 0.0 2.1 2 0 0 2 2 2 1 Yip1 domain Transformer PF06495.11 NODE_27836_length_773_cov_31.933604_g21867_i0reverse_frame_2 - 0.7 10.0 20.0 1.2 9.1 20.0 1.4 1 0 0 1 1 1 0 Fruit fly transformer protein Sporozoite_P67 PF05642.11 NODE_27836_length_773_cov_31.933604_g21867_i0forward_frame_2 - 0.01 14.0 2.9 0.012 13.8 2.9 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Mucin PF01456.17 NODE_27836_length_773_cov_31.933604_g21867_i0forward_frame_2 - 0.023 14.7 24.1 0.024 14.6 22.9 1.8 2 0 0 2 2 2 0 Mucin-like glycoprotein DUF3439 PF11921.8 NODE_27836_length_773_cov_31.933604_g21867_i0forward_frame_2 - 0.17 11.8 18.8 0.36 10.8 18.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Arm-DNA-bind_3 PF13356.6 NODE_27787_length_774_cov_2.447903_g21828_i0reverse_frame_2 - 1.6e-16 60.4 0.0 3e-16 59.6 0.0 1.5 1 0 0 1 1 1 1 Arm DNA-binding domain DUF1712 PF08217.11 NODE_27787_length_774_cov_2.447903_g21828_i0reverse_frame_2 - 0.034 12.6 0.0 0.044 12.3 0.0 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1712) Phage_int_SAM_3 PF14659.6 NODE_27787_length_774_cov_2.447903_g21828_i0reverse_frame_2 - 0.052 13.8 0.3 0.31 11.3 0.3 2.2 1 1 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 NODE_27787_length_774_cov_2.447903_g21828_i0reverse_frame_2 - 0.064 13.6 0.0 0.15 12.4 0.0 1.6 1 0 0 1 1 1 0 Phage integrase SAM-like domain Arm-DNA-bind_5 PF17293.2 NODE_27787_length_774_cov_2.447903_g21828_i0reverse_frame_2 - 0.18 12.3 4.9 1.5 9.3 0.1 2.8 3 1 0 3 3 3 0 Arm DNA-binding domain Phage_B PF02304.15 NODE_27784_length_774_cov_4.098782_g21825_i0reverse_frame_2 - 0.015 15.7 0.0 0.025 15.0 0.0 1.3 1 0 0 1 1 1 0 Scaffold protein B Glycoprot_B_PH1 PF17416.2 NODE_27781_length_774_cov_20.868742_g21822_i0reverse_frame_2 - 0.035 13.8 0.4 0.035 13.8 0.4 2.2 2 0 0 2 2 2 0 Herpesvirus Glycoprotein B Phage_int_SAM_6 PF18644.1 NODE_27767_length_774_cov_184.235453_g21810_i0forward_frame_3 - 0.00049 20.1 4.0 0.021 14.9 1.5 2.4 1 1 1 2 2 2 2 Phage integrase SAM-like domain DUF4399 PF14347.6 ORF99067 - 0.022 15.2 0.1 0.048 14.0 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4399) His_Phos_1 PF00300.22 ORF96833 - 0.0087 15.8 0.0 0.017 14.8 0.0 1.5 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Methyltransf_11 PF08241.12 ORF96514 - 2.3e-14 53.8 0.0 5.4e-14 52.6 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF96514 - 2.9e-14 53.5 0.1 5.8e-13 49.4 0.1 2.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF96514 - 3.5e-13 49.4 0.0 3.6e-12 46.1 0.0 2.0 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF96514 - 8.5e-10 39.3 0.0 1.6e-09 38.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF96514 - 1.7e-09 37.7 0.0 3.4e-08 33.4 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF96514 - 2e-06 27.7 0.0 2.7e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 ORF96514 - 0.00076 20.5 0.0 0.0021 19.0 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain CheR PF01739.18 ORF96514 - 0.0032 17.0 0.0 0.065 12.7 0.0 2.1 1 1 0 1 1 1 1 CheR methyltransferase, SAM binding domain RRM_1 PF00076.22 ORF95792 - 9.8e-09 34.9 0.0 1.6e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF95792 - 0.026 14.1 0.0 0.04 13.5 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCCH_2 PF14608.6 ORF95792 - 0.24 11.9 9.3 0.2 12.2 3.6 2.3 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger RRM_7 PF16367.5 ORF95792 - 0.24 11.5 0.0 0.4 10.8 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif Glycos_transf_4 PF00953.21 ORF93881 - 9.2e-20 71.2 15.3 9.2e-20 71.2 15.3 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 4 FixP_N PF14715.6 ORF93881 - 2.1 8.2 7.0 0.15 11.8 0.7 2.4 2 0 0 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP DUF983 PF06170.12 ORF93881 - 8.9 6.8 15.9 2.9 8.4 1.7 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF983) RT_RNaseH PF17917.1 ORF91216 - 5.6e-05 23.4 0.0 0.00014 22.0 0.0 1.7 1 1 0 1 1 1 1 RNase H-like domain found in reverse transcriptase RT_RNaseH_2 PF17919.1 ORF91216 - 0.00054 20.0 0.0 0.69 10.0 0.0 2.4 2 0 0 2 2 2 2 RNase H-like domain found in reverse transcriptase MORN PF02493.20 ORF85802 - 1.7e-28 96.8 32.0 1.4e-07 31.0 1.2 5.4 5 0 0 5 5 5 5 MORN repeat DUF778 PF05608.12 ORF85802 - 0.2 12.0 1.5 0.24 11.7 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) EF-hand_1 PF00036.32 ORF85084 - 2.1e-30 102.0 13.9 4.4e-08 32.1 3.0 4.6 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF85084 - 6.8e-25 84.8 7.0 5.7e-07 29.0 0.1 4.6 3 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF85084 - 8.1e-24 82.0 17.1 2.3e-06 26.8 0.1 5.3 3 1 2 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF85084 - 1e-23 83.5 5.4 1.9e-11 44.3 1.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF85084 - 3.4e-13 49.2 14.2 0.00066 19.5 2.0 4.4 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF85084 - 2e-09 37.8 5.0 2.6e-05 24.5 1.8 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Pkinase PF00069.25 ORF85084 - 9.5e-09 35.0 0.0 2.8e-08 33.5 0.0 1.8 2 0 0 2 2 2 1 Protein kinase domain EF-hand_4 PF12763.7 ORF85084 - 1.7e-07 31.1 6.9 0.00011 22.1 1.1 2.7 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF85084 - 0.0051 17.1 0.0 0.79 10.1 0.0 2.8 2 1 0 2 2 2 1 EF-hand domain Dockerin_1 PF00404.18 ORF85084 - 0.0072 16.5 3.4 10 6.4 0.5 3.7 3 1 0 3 3 3 1 Dockerin type I domain Staphylokinase PF02821.16 ORF85084 - 0.023 15.1 2.3 0.86 10.1 0.8 2.5 1 1 1 2 2 2 0 Staphylokinase/Streptokinase family PMBR PF09373.10 ORF85084 - 0.073 13.2 0.1 8.9 6.7 0.0 3.3 2 1 1 3 3 3 0 Pseudomurein-binding repeat NIR_SIR_ferr PF03460.17 ORF85084 - 0.15 11.9 0.0 0.63 9.9 0.0 2.0 3 0 0 3 3 3 0 Nitrite/Sulfite reductase ferredoxin-like half domain NLPC_P60 PF00877.19 ORF83349 - 6e-31 106.6 0.0 1.1e-30 105.8 0.0 1.4 1 0 0 1 1 1 1 NlpC/P60 family DUF1175 PF06672.11 ORF83349 - 2.3e-05 24.2 1.0 0.16 11.7 0.0 3.2 1 1 2 3 3 3 2 Protein of unknown function (DUF1175) DUF4326 PF14216.6 ORF83349 - 0.04 14.6 0.3 17 6.2 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4326) LRAT PF04970.13 ORF83349 - 0.07 13.4 0.0 0.18 12.1 0.0 1.7 1 0 0 1 1 1 0 Lecithin retinol acyltransferase Peptidase_C92 PF05708.12 ORF83349 - 0.12 12.5 0.0 0.9 9.6 0.0 2.2 2 0 0 2 2 2 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family TGT PF01702.18 ORF8257 - 6.8e-62 209.6 0.0 7.9e-62 209.4 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase RRM_1 PF00076.22 ORF81071 - 1.4e-24 85.7 0.2 9.9e-16 57.3 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF81071 - 1e-05 25.5 0.1 0.0001 22.3 0.1 2.2 2 1 0 2 2 2 1 RNA recognition motif PHM7_cyt PF14703.6 ORF81071 - 0.064 13.5 0.0 10 6.3 0.0 2.5 2 1 1 3 3 3 0 Cytosolic domain of 10TM putative phosphate transporter Mito_fiss_reg PF05308.11 ORF80746 - 6.7 6.7 9.2 0.58 10.2 4.6 1.5 2 0 0 2 2 2 0 Mitochondrial fission regulator KBP_C PF12309.8 ORF80444 - 3.3e-62 211.1 0.0 4e-62 210.8 0.0 1.0 1 0 0 1 1 1 1 KIF-1 binding protein C terminal HNF_C PF09354.10 ORF80444 - 0.16 13.0 0.0 0.32 12.1 0.0 1.5 1 0 0 1 1 1 0 HNF3 C-terminal domain AAA_21 PF13304.6 ORF79814 - 5.5e-06 26.4 0.0 3.3e-05 23.9 0.0 2.0 2 1 1 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 ORF79814 - 0.035 14.8 2.5 2.8 8.7 0.1 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4162) Ank_4 PF13637.6 ORF79630 - 0.012 16.2 0.0 0.065 13.8 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF79630 - 0.029 14.9 0.0 0.071 13.7 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF79630 - 0.074 13.4 0.0 1.7 9.1 0.0 2.3 1 1 1 2 2 2 0 Ankyrin repeats (many copies) LRR_9 PF14580.6 ORF77487 - 3.1e-58 196.1 0.9 3.9e-58 195.8 0.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 ORF77487 - 9.5e-10 38.1 0.8 9.6e-08 31.7 0.2 2.6 2 0 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 ORF77487 - 4.9e-08 33.1 7.1 0.0013 19.0 0.8 3.1 1 1 1 3 3 3 2 Leucine Rich repeats (2 copies) Cecropin PF00272.19 ORF77487 - 1.4 8.7 3.9 3.6 7.4 0.9 2.5 2 0 0 2 2 2 0 Cecropin family Abhydrolase_1 PF00561.20 ORF74553 - 8.5e-17 61.6 0.0 7.6e-14 52.0 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF74553 - 1.8e-13 50.4 0.0 9.7e-10 38.1 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF74553 - 1.4e-07 31.3 0.2 6.4e-07 29.1 0.2 2.0 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF74553 - 1e-06 29.5 0.0 1.2e-06 29.2 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family AXE1 PF05448.12 ORF74553 - 4.2e-06 25.7 1.6 0.028 13.1 0.0 3.1 2 1 1 3 3 3 2 Acetyl xylan esterase (AXE1) FSH1 PF03959.13 ORF74553 - 3.6e-05 23.5 0.0 6.7e-05 22.6 0.0 1.5 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S15 PF02129.18 ORF74553 - 3.8e-05 23.4 0.0 0.096 12.3 0.0 2.1 1 1 0 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_2 PF02230.16 ORF74553 - 6e-05 22.9 0.0 9.5e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 ORF74553 - 0.00012 22.0 0.0 0.0004 20.3 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF2974 PF11187.8 ORF74553 - 0.0058 16.2 0.0 0.0085 15.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) MetRS-N PF09635.10 ORF74553 - 0.0087 16.6 0.0 0.016 15.7 0.0 1.4 1 0 0 1 1 1 1 MetRS-N binding domain DLH PF01738.18 ORF74553 - 0.017 14.7 0.0 0.096 12.2 0.0 2.0 1 1 0 1 1 1 0 Dienelactone hydrolase family BAAT_C PF08840.11 ORF74553 - 0.034 14.1 0.0 0.38 10.6 0.0 2.2 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF818 PF05677.12 ORF74553 - 0.045 12.7 0.1 0.059 12.3 0.1 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) Abhydrolase_5 PF12695.7 ORF74553 - 0.063 13.0 0.1 0.25 11.1 0.1 1.8 1 1 1 2 2 2 0 Alpha/beta hydrolase family UPF0227 PF05728.12 ORF74553 - 0.082 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Esterase_phd PF10503.9 ORF74553 - 0.086 12.3 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Esterase PHB depolymerase Lipase_3 PF01764.25 ORF74553 - 0.11 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) Ndr PF03096.14 ORF74553 - 0.15 10.8 0.0 0.2 10.3 0.0 1.2 1 0 0 1 1 1 0 Ndr family WW PF00397.26 ORF73787 - 3e-10 40.0 0.0 5.8e-10 39.1 0.0 1.5 1 0 0 1 1 1 1 WW domain DUF2475 PF10629.9 ORF73483 - 0.015 15.5 0.0 0.047 13.9 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2475) GntR PF00392.21 ORF70127 - 2.4e-23 81.5 1.4 4.2e-23 80.8 0.3 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 ORF70127 - 1.6e-20 73.8 7.7 2.4e-20 73.2 7.7 1.3 1 0 0 1 1 1 1 FCD domain Rrf2 PF02082.20 ORF70127 - 4.4e-05 23.7 0.1 0.00013 22.3 0.0 1.7 2 0 0 2 2 2 1 Transcriptional regulator HTH_Crp_2 PF13545.6 ORF70127 - 0.00032 20.6 0.3 0.0012 18.8 0.0 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain TrmB PF01978.19 ORF70127 - 0.0016 18.3 0.2 0.0041 17.0 0.1 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB LexA_DNA_bind PF01726.16 ORF70127 - 0.014 15.2 0.1 0.029 14.1 0.1 1.6 1 0 0 1 1 1 0 LexA DNA binding domain HTH_CodY PF08222.11 ORF70127 - 0.087 12.4 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 CodY helix-turn-helix domain MarR_2 PF12802.7 ORF70127 - 0.11 12.4 0.1 0.28 11.1 0.0 1.7 2 0 0 2 2 2 0 MarR family HTH_11 PF08279.12 ORF70127 - 0.19 11.7 0.8 0.36 10.8 0.1 1.8 2 0 0 2 2 2 0 HTH domain PPR_2 PF13041.6 ORF70030 - 2e-28 98.3 0.0 2.4e-08 34.0 0.0 5.3 3 1 2 5 5 5 4 PPR repeat family PPR_3 PF13812.6 ORF70030 - 1.8e-23 82.3 0.0 3.1e-10 40.0 0.0 5.1 3 2 2 5 5 5 5 Pentatricopeptide repeat domain PPR PF01535.20 ORF70030 - 2.3e-21 74.5 0.5 0.00022 21.3 0.0 6.5 7 0 0 7 7 7 5 PPR repeat PPR_long PF17177.4 ORF70030 - 1.9e-17 63.3 0.0 6.5e-11 42.0 0.0 2.4 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF70030 - 5.9e-16 57.9 0.0 6.2e-06 25.8 0.0 5.4 7 0 0 7 7 7 3 PPR repeat TPR_14 PF13428.6 ORF70030 - 0.00099 19.7 0.0 4.2 8.4 0.0 4.5 4 1 1 5 5 5 1 Tetratricopeptide repeat ECSIT PF06239.11 ORF70030 - 0.027 13.6 0.0 0.063 12.4 0.0 1.6 1 0 0 1 1 1 0 Evolutionarily conserved signalling intermediate in Toll pathway ATP13 PF12921.7 ORF70030 - 0.21 11.5 0.0 1.6 8.6 0.0 2.1 1 1 1 2 2 2 0 Mitochondrial ATPase expression Chloroa_b-bind PF00504.21 ORF68464 - 1.8e-30 106.6 0.7 6.2e-30 104.9 0.1 1.8 2 0 0 2 2 2 1 Chlorophyll A-B binding protein GpcrRhopsn4 PF10192.9 ORF66507 - 2.2e-41 142.0 18.7 2.7e-41 141.7 18.7 1.1 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain Lung_7-TM_R PF06814.13 ORF66507 - 9.3e-07 28.4 10.7 1.4e-06 27.8 10.7 1.2 1 0 0 1 1 1 1 Lung seven transmembrane receptor YoqO PF14037.6 ORF66507 - 0.0068 16.9 1.2 0.0068 16.9 1.2 3.0 2 1 1 3 3 3 1 YoqO-like protein DUF4271 PF14093.6 ORF66507 - 0.22 11.4 23.3 0.42 10.5 10.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4271) DUF3792 PF12670.7 ORF66507 - 0.63 10.2 17.7 4.3 7.5 6.5 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3792) DUF4191 PF13829.6 ORF66507 - 2.6 7.3 5.8 0.29 10.5 1.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) DUF2569 PF10754.9 ORF66507 - 2.9 8.3 14.6 1.7 9.1 9.2 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2569) MTABC_N PF16185.5 ORF66507 - 5.1 6.5 9.2 7.1 6.0 7.7 1.5 1 1 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region His_Phos_1 PF00300.22 ORF66093 - 3.6e-36 124.7 0.0 1.8e-28 99.5 0.2 2.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) Porin_OmpG PF09381.10 ORF66093 - 0.055 13.2 0.1 0.1 12.3 0.1 1.4 1 0 0 1 1 1 0 Outer membrane protein G (OmpG) NTP_transferase PF00483.23 ORF6050 - 7.2e-48 163.3 0.0 8.2e-48 163.1 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 ORF6050 - 5.1e-07 30.2 0.0 6.4e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 ORF6050 - 0.11 12.2 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABC_tran PF00005.27 ORF60223 - 1.1e-34 119.9 0.0 1.5e-34 119.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF60223 - 2.5e-10 40.6 0.0 0.00012 22.0 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF60223 - 1.6e-07 31.0 0.0 6.3e-07 29.0 0.0 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF60223 - 3.7e-06 26.9 0.0 3.7e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF60223 - 4.2e-05 23.8 0.0 0.00014 22.1 0.0 1.9 1 1 1 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF60223 - 7.6e-05 22.4 0.0 0.00015 21.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF60223 - 9.5e-05 22.4 0.0 0.00022 21.2 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 ORF60223 - 0.00017 22.0 0.0 0.00036 21.0 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 ORF60223 - 0.00023 21.7 0.6 0.00027 21.5 0.6 1.5 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 ORF60223 - 0.00046 20.2 0.0 0.00072 19.5 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain PRK PF00485.18 ORF60223 - 0.0062 16.3 0.0 0.021 14.6 0.0 1.9 3 0 0 3 3 3 1 Phosphoribulokinase / Uridine kinase family AAA_30 PF13604.6 ORF60223 - 0.013 15.2 0.0 0.25 11.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF60223 - 0.032 14.4 0.0 0.073 13.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF60223 - 0.057 13.1 0.0 0.12 12.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF60223 - 0.071 12.6 0.0 0.23 10.9 0.0 1.9 1 1 0 1 1 1 0 PhoH-like protein G-alpha PF00503.20 ORF60223 - 0.081 12.1 0.0 0.083 12.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit IstB_IS21 PF01695.17 ORF60223 - 0.091 12.5 0.1 2.2 8.0 0.0 2.7 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_25 PF13481.6 ORF60223 - 0.096 12.2 0.0 0.35 10.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF60223 - 0.1 13.0 0.0 0.24 11.8 0.0 1.8 1 0 0 1 1 1 0 RNA helicase Adeno_IVa2 PF02456.15 ORF60223 - 0.1 11.4 0.0 0.34 9.7 0.0 1.7 2 0 0 2 2 2 0 Adenovirus IVa2 protein ATPase_2 PF01637.18 ORF60223 - 0.1 12.5 0.0 0.4 10.5 0.0 1.9 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_18 PF13238.6 ORF60223 - 0.11 13.1 0.0 0.21 12.1 0.0 1.6 2 0 0 2 2 1 0 AAA domain AAA_5 PF07728.14 ORF60223 - 0.12 12.4 0.0 0.29 11.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TniB PF05621.11 ORF60223 - 0.13 11.6 0.0 0.53 9.7 0.0 1.8 2 0 0 2 2 2 0 Bacterial TniB protein AAA_28 PF13521.6 ORF60223 - 0.14 12.4 0.0 0.3 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 ORF60223 - 0.16 11.8 0.0 0.35 10.7 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase Sigma70_r4 PF04545.16 ORF59779 - 2e-18 65.6 1.1 6e-17 60.9 0.3 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 ORF59779 - 5.5e-17 61.3 0.0 1e-16 60.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 KORA PF16509.5 ORF59779 - 0.00059 20.1 0.6 0.31 11.3 0.2 2.5 2 0 0 2 2 2 2 TrfB plasmid transcriptional repressor Sigma70_r3 PF04539.16 ORF59779 - 0.0056 16.8 2.1 3.3 7.9 0.4 2.8 2 0 0 2 2 2 2 Sigma-70 region 3 HTH_10 PF04967.12 ORF59779 - 0.013 15.2 0.0 0.16 11.8 0.0 2.5 2 0 0 2 2 2 0 HTH DNA binding domain UCR_14kD PF02271.16 ORF59779 - 0.028 14.4 0.6 0.36 10.8 0.1 2.7 2 1 0 2 2 2 0 Ubiquinol-cytochrome C reductase complex 14kD subunit HTH_AsnC-type PF13404.6 ORF59779 - 0.029 14.2 0.5 0.34 10.8 0.1 2.5 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_25 PF13413.6 ORF59779 - 0.031 14.2 2.2 0.47 10.4 0.1 3.2 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_3 PF01381.22 ORF59779 - 0.059 13.4 0.1 0.36 10.9 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix SANT_DAMP1_like PF16282.5 ORF59779 - 0.089 13.0 0.1 0.2 11.9 0.1 1.6 1 0 0 1 1 1 0 SANT/Myb-like domain of DAMP1 DUF5412 PF17428.2 ORF59779 - 0.11 12.4 0.1 0.21 11.5 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5412) MerR PF00376.23 ORF59779 - 0.12 12.2 0.2 4.8 7.0 0.0 2.5 2 0 0 2 2 2 0 MerR family regulatory protein HTH_31 PF13560.6 ORF59779 - 0.13 12.6 0.8 2.5 8.5 0.1 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain DUF3606 PF12244.8 ORF59779 - 0.16 11.9 1.2 20 5.2 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3606) 2Fe-2S_thioredx PF01257.19 ORF59779 - 0.18 11.7 0.0 0.63 9.9 0.0 1.8 2 0 0 2 2 2 0 Thioredoxin-like [2Fe-2S] ferredoxin IF2_N PF04760.15 ORF59779 - 0.3 10.9 3.8 9.8 6.1 0.0 3.6 5 0 0 5 5 5 0 Translation initiation factor IF-2, N-terminal region DUF1129 PF06570.11 ORF55448 - 0.023 14.2 7.7 0.033 13.7 5.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) DUF2207 PF09972.9 ORF55448 - 1.9 7.1 5.7 2.4 6.8 5.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2040 PF09745.9 ORF52565 - 0.12 12.4 1.5 0.21 11.6 1.5 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 55 (DUF2040) SHIPPO-rpt PF07004.12 ORF52565 - 0.14 13.1 0.2 0.14 13.1 0.2 2.6 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat DUF489 PF04356.12 ORF51110 - 0.038 14.0 0.0 0.056 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF489) A_thal_3526 PF09713.10 ORF51110 - 0.25 11.6 0.3 1.2 9.4 0.0 2.2 3 0 0 3 3 3 0 Plant protein 1589 of unknown function (A_thal_3526) Pox_D5 PF03288.16 ORF48424 - 0.063 13.8 0.2 0.13 12.8 0.2 1.5 1 0 0 1 1 1 0 Poxvirus D5 protein-like DUF4004 PF13171.6 ORF48424 - 0.069 13.4 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4004) ubiquitin PF00240.23 ORF46925 - 3.4e-08 33.1 0.0 6e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family YukD PF08817.10 ORF46925 - 0.034 14.8 0.0 0.063 14.0 0.0 1.5 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD cNMP_binding PF00027.29 ORF44163 - 2.4e-10 40.3 0.1 6.1e-10 39.0 0.0 1.7 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain DUF3452 PF11934.8 ORF44163 - 0.089 12.3 0.1 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) DUF3644 PF12358.8 ORF44163 - 0.14 12.7 1.0 0.38 11.3 1.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3644) Myosin_N PF02736.19 ORF44163 - 0.17 11.7 0.4 0.36 10.7 0.4 1.6 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain ADP_ribosyl_GH PF03747.14 ORF44034 - 9e-19 68.3 0.0 1.4e-18 67.6 0.0 1.3 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase CDC45 PF02724.14 ORF44034 - 8.7 4.5 11.8 10 4.3 11.8 1.1 1 0 0 1 1 1 0 CDC45-like protein PhyH PF05721.13 ORF43938 - 1.3e-09 38.7 0.0 1.9e-09 38.1 0.0 1.4 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) DOT1 PF08123.13 ORF41564 - 3.3e-13 49.7 0.0 4.6e-13 49.2 0.0 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 CMAS PF02353.20 ORF41564 - 7.4e-05 22.2 0.0 0.00031 20.1 0.0 1.8 1 1 1 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 ORF41564 - 0.029 15.1 0.0 0.051 14.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 ORF41564 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Met_10 PF02475.16 ORF41564 - 0.12 12.1 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_4 PF02390.17 ORF41564 - 0.2 11.1 0.0 0.28 10.6 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase DUF724 PF05266.14 ORF40693 - 2.6 7.8 37.7 1.5 8.6 11.1 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF724) Sulfatase_C PF14707.6 ORF40693 - 5.2 7.8 10.7 0.19 12.5 1.1 3.0 2 1 1 3 3 3 0 C-terminal region of aryl-sulfatase Moulting_cycle PF04870.16 ORF38695 - 0.0065 15.8 0.7 0.17 11.2 0.1 2.3 2 1 0 2 2 2 1 Moulting cycle DUF2369 PF10179.9 ORF38695 - 0.0066 16.8 0.0 0.04 14.3 0.0 2.4 1 1 1 2 2 2 1 Uncharacterised conserved protein (DUF2369) PNK3P PF08645.11 ORF38695 - 0.083 12.6 0.2 2.2 8.0 0.1 2.6 2 1 1 3 3 3 0 Polynucleotide kinase 3 phosphatase ProQ_C PF17516.2 ORF37240 - 0.00061 19.2 0.1 0.019 14.4 0.0 2.5 2 0 0 2 2 2 1 ProQ C-terminal domain L_lactis_ph-MCP PF06673.11 ORF37240 - 0.049 12.6 0.0 0.066 12.2 0.0 1.1 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein KOW PF00467.29 ORF37240 - 1.2 9.2 3.8 7.5 6.7 1.7 2.5 2 0 0 2 2 2 0 KOW motif SR-25 PF10500.9 ORF36392 - 0.22 11.1 24.8 0.28 10.8 24.8 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4551 PF15087.6 ORF36392 - 5.8 5.6 8.5 6.2 5.5 8.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) MORN PF02493.20 ORF3116 - 3.9e-06 26.4 0.9 0.00087 19.1 0.1 2.5 2 0 0 2 2 2 2 MORN repeat TraB PF01963.17 ORF2856 - 0.059 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 TraB family Tti2 PF10521.9 ORF2749 - 0.016 14.7 1.7 0.021 14.4 1.7 1.2 1 0 0 1 1 1 0 Tti2 family MORN PF02493.20 ORF2587 - 1.7e-28 96.8 32.0 1.4e-07 31.0 1.2 5.4 5 0 0 5 5 5 5 MORN repeat DUF778 PF05608.12 ORF2587 - 0.2 12.0 1.5 0.24 11.7 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) AA_permease PF00324.21 ORF22840 - 1.5e-56 192.0 16.0 1.7e-56 191.8 16.0 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF22840 - 6.5e-26 91.1 23.4 7.3e-26 91.0 23.4 1.0 1 0 0 1 1 1 1 Amino acid permease DUF4131 PF13567.6 ORF22840 - 1.4 8.5 9.6 3.8 7.1 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) SSF PF00474.17 ORF2027 - 1.1e-17 64.1 1.8 1.1e-17 64.1 1.8 1.9 2 1 0 2 2 2 1 Sodium:solute symporter family Polysacc_synt_C PF14667.6 ORF2027 - 0.009 16.1 0.5 0.009 16.1 0.5 3.3 2 1 1 3 3 3 1 Polysaccharide biosynthesis C-terminal domain CcmD PF04995.14 ORF2027 - 0.057 13.5 0.1 0.057 13.5 0.1 2.2 2 0 0 2 2 2 0 Heme exporter protein D (CcmD) LRR_9 PF14580.6 ORF19362 - 3.1e-58 196.1 0.9 3.9e-58 195.8 0.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 ORF19362 - 9.5e-10 38.1 0.8 9.6e-08 31.7 0.2 2.6 2 0 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 ORF19362 - 4.9e-08 33.1 7.1 0.0013 19.0 0.8 3.1 1 1 1 3 3 3 2 Leucine Rich repeats (2 copies) Cecropin PF00272.19 ORF19362 - 1.4 8.7 3.9 3.6 7.4 0.9 2.5 2 0 0 2 2 2 0 Cecropin family ubiquitin PF00240.23 ORF16236 - 0.2 11.4 0.0 0.33 10.7 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin family Iso_dh PF00180.20 ORF15219 - 1.9e-59 201.6 0.1 2.4e-59 201.2 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase zf-C2H2 PF00096.26 ORF13324 - 8.2e-18 63.8 16.9 3.3e-06 27.2 2.4 3.9 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF13324 - 2e-11 43.7 13.9 0.00081 20.0 1.4 3.8 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF13324 - 1.6e-08 34.6 14.1 0.0001 22.6 0.3 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF13324 - 1.2e-06 28.1 3.1 1.2e-06 28.1 3.1 3.2 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF13324 - 2e-05 24.8 9.6 0.00039 20.7 0.5 2.6 1 1 1 2 2 2 2 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF13324 - 0.0058 16.4 2.8 0.015 15.0 0.2 2.4 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-met PF12874.7 ORF13324 - 0.013 15.8 0.8 0.013 15.8 0.8 4.0 4 1 0 4 4 4 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF13324 - 0.018 15.3 1.9 0.018 15.3 1.9 3.2 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 ORF13324 - 0.024 14.6 14.2 0.25 11.4 2.7 2.9 3 0 0 3 3 2 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 ORF13324 - 0.04 14.0 3.3 0.97 9.6 0.2 3.0 2 0 0 2 2 2 0 Zinc ribbon domain Mut7-C PF01927.16 ORF13324 - 0.062 13.4 3.1 0.15 12.2 3.1 1.7 1 1 0 1 1 1 0 Mut7-C RNAse domain zf-C2H2_2 PF12756.7 ORF13324 - 0.09 13.1 14.3 0.079 13.3 2.2 3.4 2 1 1 3 3 3 0 C2H2 type zinc-finger (2 copies) zf-BED PF02892.15 ORF13324 - 0.87 9.7 10.1 8.4 6.5 0.9 2.9 1 1 1 2 2 2 0 BED zinc finger tRNA_anti-codon PF01336.25 ORF11430 - 1.1e-07 31.7 0.0 2.1e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Cullin_Nedd8 PF10557.9 ORF11430 - 0.06 13.4 0.6 1.5 8.9 0.0 2.9 3 0 0 3 3 3 0 Cullin protein neddylation domain HTH_WhiA PF02650.14 ORF11430 - 0.11 12.9 0.2 1.1 9.6 0.0 2.1 2 0 0 2 2 2 0 WhiA C-terminal HTH domain Pepdidase_M14_N PF18027.1 ORF10769 - 6.7e-15 55.4 0.3 1.3e-14 54.5 0.1 1.5 1 1 1 2 2 2 1 Cytosolic carboxypeptidase N-terminal domain Peptidase_M14 PF00246.24 ORF10769 - 1.3e-07 31.8 0.0 5.4e-07 29.7 0.0 2.0 1 1 1 2 2 2 1 Zinc carboxypeptidase DAO PF01266.24 ORF107445 - 2.8e-20 73.2 0.0 3.3e-20 73.0 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF107445 - 0.01 15.0 0.0 0.015 14.4 0.0 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A FHA PF00498.26 ORF107122 - 1.5e-11 44.5 0.1 4.5e-11 42.9 0.1 1.9 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF107122 - 1.6e-07 31.5 0.0 1e-06 29.0 0.0 2.2 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain MRP-S32 PF10210.9 ORF107122 - 0.062 13.9 0.9 0.33 11.5 0.3 2.2 2 0 0 2 2 2 0 Mitochondrial 28S ribosomal protein S32 CBM_26 PF16824.5 ORF107122 - 0.064 13.4 0.3 0.59 10.3 0.0 2.6 2 1 1 3 3 3 0 C-terminal carbohydrate-binding module zf-C2H2 PF00096.26 ORF105863 - 5.4e-15 54.9 26.2 3.3e-06 27.2 2.4 4.1 4 0 0 4 4 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF105863 - 1.4e-11 44.1 13.9 0.00081 20.0 1.4 4.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF105863 - 2e-08 34.3 14.1 0.0001 22.6 0.3 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF105863 - 1.2e-06 28.1 3.1 1.2e-06 28.1 3.1 3.3 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF105863 - 0.00039 20.7 0.5 0.00039 20.7 0.5 2.7 2 1 1 3 3 3 2 C2H2-type zinc ribbon zf-met PF12874.7 ORF105863 - 0.013 15.8 0.8 0.013 15.8 0.8 4.1 4 1 0 4 4 4 0 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF105863 - 0.015 15.0 0.2 0.015 15.0 0.2 2.7 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF105863 - 0.018 15.3 1.9 0.018 15.3 1.9 3.2 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 ORF105863 - 0.024 14.6 14.2 0.25 11.4 2.7 2.9 3 0 0 3 3 2 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 ORF105863 - 0.037 14.2 3.3 0.97 9.6 0.2 3.1 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2_2 PF12756.7 ORF105863 - 0.056 13.8 1.2 0.056 13.8 1.2 3.6 2 2 3 5 5 5 0 C2H2 type zinc-finger (2 copies) Mut7-C PF01927.16 ORF105863 - 0.074 13.2 3.6 0.19 11.8 3.5 1.8 1 1 0 1 1 1 0 Mut7-C RNAse domain zf-BED PF02892.15 ORF105863 - 0.86 9.7 10.1 8.4 6.5 0.9 2.9 1 1 1 2 2 2 0 BED zinc finger zf-C2HE PF16278.5 ORF105863 - 5.5 7.5 8.7 9.2 6.8 2.0 3.5 2 1 1 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger DUF5596 PF18082.1 ORF105760 - 0.13 12.1 0.0 2.4 8.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5596) Abhydrolase_1 PF00561.20 ORF104033 - 2.9e-14 53.3 0.0 4.3e-14 52.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF104033 - 8.4e-08 33.1 0.0 9e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF104033 - 0.0026 17.1 0.0 0.0033 16.7 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 ORF104033 - 0.0089 15.7 0.1 0.018 14.7 0.0 1.5 2 0 0 2 2 2 1 Putative esterase TPH PF13868.6 ORF102141 - 0.16 10.5 36.4 0.0099 14.4 29.1 1.7 1 1 0 1 1 1 0 Trichohyalin-plectin-homology domain Asp-B-Hydro_N PF05279.11 ORF102141 - 1.2 9.2 15.4 1.8 8.6 15.4 1.4 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DUF2255 PF10012.9 NODE_28109_length_766_cov_308.619699_g22098_i0reverse_frame_1 - 0.9 9.7 3.0 2.8 8.1 0.0 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2255) Hfq PF17209.3 NODE_28109_length_766_cov_308.619699_g22098_i0forward_frame_1 - 0.0013 18.4 0.0 16 5.2 0.0 4.4 5 0 0 5 5 5 2 Hfq protein YmgB PF10798.8 NODE_28109_length_766_cov_308.619699_g22098_i0forward_frame_1 - 0.009 15.8 0.0 9.1 6.2 0.0 3.3 3 0 0 3 3 3 1 Biofilm development protein YmgB/AriR Integrase_Zn PF02022.19 NODE_28109_length_766_cov_308.619699_g22098_i0forward_frame_1 - 1.2 9.2 6.5 2.2 8.3 0.0 3.7 4 0 0 4 4 4 0 Integrase Zinc binding domain SPATA9 PF15824.5 NODE_28075_length_767_cov_159.919399_g20934_i1forward_frame_1 - 2.4 7.4 4.4 1.5 8.0 1.5 1.9 1 1 1 2 2 2 0 Spermatogenesis-associated protein 9 CLIP PF12032.8 NODE_28066_length_767_cov_349.997268_g22061_i0forward_frame_1 - 0.073 13.4 0.1 0.28 11.5 0.1 1.9 1 0 0 1 1 1 0 Regulatory CLIP domain of proteinases TFR_dimer PF04253.15 NODE_27997_length_769_cov_92.061308_g22002_i0reverse_frame_3 - 2.7 8.1 7.6 0.92 9.6 2.5 2.4 2 1 0 3 3 3 0 Transferrin receptor-like dimerisation domain DSBA PF01323.20 NODE_27997_length_769_cov_92.061308_g22002_i0reverse_frame_3 - 4.4 7.0 7.0 9.4 6.0 1.6 2.4 1 1 0 2 2 2 0 DSBA-like thioredoxin domain Neur_chan_memb PF02932.16 NODE_27997_length_769_cov_92.061308_g22002_i0reverse_frame_2 - 6 6.8 7.8 8.1 6.4 7.8 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CAP_N PF01213.19 NODE_27986_length_769_cov_195.820163_g21993_i0reverse_frame_3 - 2.4 7.5 5.0 1.3 8.4 3.2 1.6 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) N terminal DUF4286 PF14114.6 NODE_27976_length_769_cov_475.382834_g21983_i0reverse_frame_2 - 0.09 13.3 1.5 2.7 8.6 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4286) Pkinase PF00069.25 NODE_27968_length_769_cov_3580.670300_g19647_i1reverse_frame_3 - 2.5e-37 128.7 0.2 3e-37 128.4 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_27968_length_769_cov_3580.670300_g19647_i1reverse_frame_3 - 7.8e-26 90.9 0.1 9.7e-26 90.6 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_27968_length_769_cov_3580.670300_g19647_i1reverse_frame_3 - 0.0017 17.3 0.3 0.0023 17.0 0.3 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 NODE_27968_length_769_cov_3580.670300_g19647_i1reverse_frame_3 - 0.014 14.8 0.1 0.019 14.3 0.1 1.3 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_27968_length_769_cov_3580.670300_g19647_i1reverse_frame_3 - 0.025 13.9 0.0 0.035 13.4 0.0 1.2 1 0 0 1 1 1 0 Kinase-like DUF35_N PF12172.8 NODE_27946_length_770_cov_141.185034_g21959_i0forward_frame_3 - 0.35 10.8 4.5 1.1 9.2 4.5 1.9 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Lysyl_oxidase PF01186.17 NODE_27946_length_770_cov_141.185034_g21959_i0forward_frame_2 - 1.8 8.2 6.5 1.3 8.7 5.0 1.5 2 0 0 2 2 2 0 Lysyl oxidase YfhE PF14152.6 NODE_27897_length_771_cov_203.676630_g21922_i0forward_frame_3 - 0.14 12.3 0.6 0.26 11.4 0.6 1.4 1 0 0 1 1 1 0 YfhE-like protein Serinc PF03348.15 ORF95285 - 2 7.2 7.4 2.3 7.0 6.6 1.5 1 1 0 1 1 1 0 Serine incorporator (Serinc) HpcH_HpaI PF03328.14 ORF89113 - 1.6e-62 210.6 0.0 1.8e-62 210.4 0.0 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 ORF89113 - 8.7e-05 21.6 0.0 0.00011 21.2 0.0 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain Catalase_C PF18011.1 ORF89113 - 0.028 14.0 0.3 0.04 13.5 0.3 1.2 1 0 0 1 1 1 0 C-terminal domain found in long catalases zf-C2H2 PF00096.26 ORF86858 - 1.9e-13 50.0 20.4 2e-05 24.8 1.3 4.3 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF86858 - 2.4e-09 37.2 14.1 0.0023 18.6 0.8 4.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF86858 - 3.8e-08 33.4 6.2 0.00061 20.1 1.2 3.1 2 0 0 2 2 2 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF86858 - 4.2e-05 23.2 2.3 4.2e-05 23.2 2.3 3.1 3 1 0 3 3 3 1 C2H2-type zinc-finger domain HNH_5 PF14279.6 ORF86858 - 0.00083 19.2 3.3 0.00083 19.2 3.3 2.9 3 0 0 3 3 3 1 HNH endonuclease zf-C2H2_8 PF15909.5 ORF86858 - 0.005 17.1 1.4 0.005 17.1 1.4 2.3 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF86858 - 0.069 12.9 0.3 0.069 12.9 0.3 2.7 3 0 0 3 3 3 0 zinc-finger C2H2-type Mut7-C PF01927.16 ORF86858 - 0.097 12.8 4.5 0.16 12.1 4.4 1.6 1 1 0 1 1 1 0 Mut7-C RNAse domain zf-met PF12874.7 ORF86858 - 0.25 11.8 0.4 0.25 11.8 0.4 4.1 4 1 0 4 4 4 0 Zinc-finger of C2H2 type Zn-ribbon_8 PF09723.10 ORF86858 - 0.32 11.1 6.4 1.3 9.2 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zf-AN1 PF01428.16 ORF86858 - 0.63 10.3 7.2 7 6.9 0.3 3.6 3 0 0 3 3 3 0 AN1-like Zinc finger zf_ZIC PF18366.1 ORF86858 - 1.2 9.3 3.3 34 4.7 0.1 2.9 3 0 0 3 3 3 0 Zic proteins zinc finger domain Endonuclease_7 PF02945.15 ORF86858 - 2.2 8.3 9.2 0.69 9.9 4.7 2.5 2 1 0 2 2 2 0 Recombination endonuclease VII zf-C2HE PF16278.5 ORF86858 - 3.8 8.0 6.9 13 6.4 1.2 2.8 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_jaz PF12171.8 ORF86858 - 5.3 7.5 12.0 0.96 9.8 1.3 3.5 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding TOPRIM_C PF16898.5 ORF83694 - 0.35 11.1 4.8 4.7 7.5 0.0 3.1 3 1 0 3 3 3 0 C-terminal associated domain of TOPRIM DUF3314 PF11771.8 ORF74139 - 0.23 11.6 2.8 0.42 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3314) Membralin PF09746.9 ORF74139 - 9.4 5.2 6.7 15 4.4 6.7 1.3 1 0 0 1 1 1 0 Tumour-associated protein TIM PF00121.18 ORF70456 - 5.1e-84 281.4 0.2 5.9e-84 281.2 0.2 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase Abhydrolase_1 PF00561.20 ORF65403 - 3.7e-32 112.0 0.0 4.3e-32 111.8 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF65403 - 8.8e-16 59.2 4.1 1.1e-15 58.9 4.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF65403 - 9e-11 41.5 0.0 1.5e-10 40.8 0.0 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 ORF65403 - 6.5e-06 26.4 0.0 7.6e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_5 PF12695.7 ORF65403 - 6.6e-05 22.7 0.0 0.0022 17.8 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase family Ndr PF03096.14 ORF65403 - 0.0014 17.4 0.0 0.0018 17.0 0.0 1.2 1 0 0 1 1 1 1 Ndr family Esterase PF00756.20 ORF65403 - 0.019 14.7 0.0 0.028 14.1 0.0 1.3 1 0 0 1 1 1 0 Putative esterase Peptidase_S9 PF00326.21 ORF65403 - 0.055 12.9 0.0 0.098 12.1 0.0 1.4 1 0 0 1 1 1 0 Prolyl oligopeptidase family UPF0227 PF05728.12 ORF65403 - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) PGAP1 PF07819.13 ORF65403 - 0.18 11.5 0.0 0.28 10.8 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein MORN PF02493.20 ORF62794 - 1.5e-24 84.4 41.1 5.1e-06 26.1 2.3 7.4 7 0 0 7 7 7 6 MORN repeat TerD PF02342.18 ORF60264 - 2.8e-37 128.0 0.0 3.7e-37 127.6 0.0 1.1 1 0 0 1 1 1 1 TerD domain SBBP PF06739.11 ORF60264 - 0.082 12.9 0.2 0.16 12.0 0.2 1.4 1 0 0 1 1 1 0 Beta-propeller repeat 2OG-FeII_Oxy PF03171.20 ORF53966 - 7.9e-08 32.7 0.1 1.1e-07 32.3 0.1 1.5 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF4079 PF13301.6 ORF53168 - 6.9e-48 162.4 0.4 1.2e-47 161.6 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF4079) DUF2157 PF09925.9 ORF53168 - 2.6e-05 24.1 2.7 2.6e-05 24.1 2.7 2.4 2 1 0 3 3 3 1 Predicted membrane protein (DUF2157) DUF2206 PF09971.9 ORF53168 - 0.016 14.0 0.0 0.024 13.4 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) DUF2681 PF10883.8 ORF53168 - 0.084 13.3 0.1 0.22 12.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) DUF5129 PF17173.4 ORF53168 - 0.09 11.9 0.5 0.2 10.8 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5129) DUF2207 PF09972.9 ORF53168 - 0.15 10.8 0.0 0.23 10.2 0.0 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF572 PF04502.13 ORF52092 - 5.7e-39 134.7 12.1 1.3e-38 133.5 12.1 1.5 1 1 0 1 1 1 1 Family of unknown function (DUF572) Methyltransf_21 PF05050.12 ORF50800 - 0.082 12.9 0.0 0.81 9.7 0.0 2.1 1 1 1 2 2 2 0 Methyltransferase FkbM domain ADP_ribosyl_GH PF03747.14 ORF50731 - 3.6e-14 53.2 14.8 8.9e-14 51.9 14.8 1.6 1 1 0 1 1 1 1 ADP-ribosylglycohydrolase zf-RanBP PF00641.18 ORF50731 - 1.5e-07 30.6 2.7 3.2e-07 29.6 2.7 1.5 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others DZR PF12773.7 ORF50731 - 0.00067 19.6 1.4 0.0017 18.3 0.4 2.1 2 0 0 2 2 2 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 ORF50731 - 0.56 10.0 5.4 0.26 11.1 2.6 1.9 2 0 0 2 2 2 0 zinc-ribbon domain Leucyl-specific PF14795.6 ORF43810 - 0.00016 21.6 1.3 0.12 12.4 0.0 3.3 3 0 0 3 3 3 2 Leucine-tRNA synthetase-specific domain PY_rept_46 PF09689.10 ORF43810 - 0.36 11.4 5.2 0.49 11.0 0.2 2.7 3 0 0 3 3 3 0 Plasmodium yoelii repeat (PY_rept_46) DnaJ_C PF01556.18 ORF39795 - 1.1e-45 155.3 0.0 1.3e-45 155.1 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.19 ORF39795 - 1.9e-16 60.2 17.0 3.4e-16 59.4 17.0 1.4 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 ORF39795 - 1.3e-06 28.3 14.6 8.4e-05 22.5 3.2 3.1 1 1 3 4 4 4 4 Tryptophan RNA-binding attenuator protein inhibitory protein Cytochrome_C7 PF14522.6 ORF39795 - 0.013 15.4 10.7 3.6 7.6 10.9 2.5 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c DUF5351 PF17302.2 ORF39795 - 0.026 14.7 18.7 1.3 9.3 0.7 4.6 4 0 0 4 4 4 0 Family of unknown function (DUF5351) Lar_restr_allev PF14354.6 ORF39795 - 0.21 12.0 13.4 0.6 10.5 0.2 4.1 1 1 3 4 4 4 0 Restriction alleviation protein Lar TackOD1 PF18551.1 ORF39795 - 0.25 11.0 6.4 0.47 10.1 1.4 2.2 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 zinc_ribbon_9 PF14369.6 ORF39795 - 0.38 11.1 9.1 8 6.8 0.1 3.5 3 1 0 3 3 3 0 zinc-ribbon Cytochrom_c3_2 PF14537.6 ORF39795 - 0.55 10.7 10.8 1.7 9.1 10.8 1.9 1 1 0 1 1 1 0 Cytochrome c3 HypA PF01155.19 ORF39795 - 0.76 9.8 10.7 2.3 8.3 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Protocadherin PF08374.11 ORF38370 - 8.3 6.3 18.5 1.7 8.6 14.9 1.7 1 1 1 2 2 2 0 Protocadherin 7tm_3 PF00003.22 ORF38092 - 0.0072 16.1 0.3 0.0084 15.9 0.3 1.1 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR MscS_TM PF12794.7 ORF38092 - 0.014 14.3 0.2 0.021 13.7 0.2 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 CttA_N PF18244.1 ORF38092 - 0.016 15.6 0.0 0.032 14.7 0.0 1.5 1 0 0 1 1 1 0 Cellulose-binding protein CttA N-terminal domain DUF2207 PF09972.9 ORF38092 - 0.081 11.7 0.1 0.1 11.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MARVEL PF01284.23 ORF38092 - 0.16 12.0 3.8 0.23 11.5 3.8 1.2 1 0 0 1 1 1 0 Membrane-associating domain DUF4239 PF14023.6 ORF38092 - 0.2 11.4 0.4 0.3 10.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF2273 PF10031.9 ORF38092 - 9.4 6.3 8.5 0.78 9.8 0.4 2.2 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) DUF2391 PF09622.10 ORF37487 - 0.016 14.5 0.8 0.021 14.1 0.2 1.4 2 0 0 2 2 2 0 Putative integral membrane protein (DUF2391) Tup_N PF08581.10 ORF30771 - 3.1 8.2 19.2 0.27 11.5 2.9 3.3 2 2 2 4 4 4 0 Tup N-terminal AMP-binding PF00501.28 ORF2916 - 1.5e-21 76.5 0.3 2.2e-21 75.9 0.3 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF2916 - 3e-20 73.0 0.1 5e-20 72.3 0.1 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF229 PF02995.17 ORF25835 - 2.8e-21 75.7 0.1 4.1e-21 75.2 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF25835 - 1.2e-06 28.2 0.3 1.5e-06 27.9 0.3 1.2 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF25835 - 0.059 13.0 0.1 0.073 12.6 0.1 1.2 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF229 PF02995.17 ORF19177 - 2.8e-21 75.7 0.1 4.1e-21 75.2 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF19177 - 1.2e-06 28.2 0.3 1.5e-06 27.9 0.3 1.2 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF19177 - 0.059 13.0 0.1 0.073 12.6 0.1 1.2 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase Dpy-30 PF05186.13 ORF17948 - 5.5e-06 26.0 0.0 2.5e-05 23.9 0.0 2.0 2 0 0 2 2 2 1 Dpy-30 motif Acyl_transf_2 PF02273.15 ORF17948 - 0.076 12.2 0.3 0.1 11.8 0.3 1.2 1 0 0 1 1 1 0 Acyl transferase DUF4249 PF14054.6 ORF17948 - 0.17 11.5 6.1 0.21 11.2 6.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4249) V_ATPase_I PF01496.19 ORF17948 - 0.36 8.7 5.5 0.42 8.5 5.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4635 PF15466.6 ORF17948 - 0.41 10.2 4.4 0.33 10.5 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4635) PTPlike_phytase PF14566.6 ORF17948 - 2.6 8.1 6.4 2.1 8.4 3.3 2.2 1 1 1 2 2 2 0 Inositol hexakisphosphate zf-C2H2 PF00096.26 ORF1346 - 1.3e-13 50.5 21.3 2e-05 24.8 1.3 4.3 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF1346 - 3.9e-10 39.7 15.0 0.0023 18.6 0.8 4.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF1346 - 5.6e-06 26.6 14.1 0.00061 20.1 1.2 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF1346 - 4.2e-05 23.2 2.3 4.2e-05 23.2 2.3 3.0 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF1346 - 0.0029 17.9 9.9 0.0094 16.2 1.8 2.5 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF1346 - 0.013 15.8 0.8 0.013 15.8 0.8 4.1 4 1 0 4 4 4 0 Zinc-finger of C2H2 type HNH_5 PF14279.6 ORF1346 - 0.013 15.3 2.6 0.013 15.3 2.6 2.9 3 0 0 3 3 3 0 HNH endonuclease zf-C2H2_jaz PF12171.8 ORF1346 - 0.018 15.3 1.9 0.018 15.3 1.9 3.5 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 ORF1346 - 0.069 12.9 0.3 0.069 12.9 0.3 2.7 3 0 0 3 3 3 0 zinc-finger C2H2-type Mut7-C PF01927.16 ORF1346 - 0.12 12.4 4.9 0.2 11.8 4.9 1.6 1 1 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.10 ORF1346 - 0.25 11.5 6.4 0.96 9.6 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF1346 - 0.44 10.6 14.1 0.34 11.0 0.7 3.1 3 0 0 3 3 3 0 C2H2-type zinc finger zf-AN1 PF01428.16 ORF1346 - 1.3 9.2 8.4 7 6.9 0.3 3.6 3 0 0 3 3 3 0 AN1-like Zinc finger zf-C2H2_2 PF12756.7 ORF1346 - 6.3 7.2 19.4 3.1 8.2 9.9 3.7 2 2 1 3 3 3 0 C2H2 type zinc-finger (2 copies) PyrI_C PF02748.15 ORF1346 - 6.5 6.7 9.7 5.7 6.9 0.6 3.4 4 0 0 4 4 4 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Ribosomal_L31e PF01198.19 ORF1095 - 0.14 12.4 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L31e ESM4 PF15952.5 ORF106788 - 0.19 12.1 7.0 0.37 11.2 7.0 1.4 1 0 0 1 1 1 0 Enhancer of split M4 family Hydin_ADK PF17213.3 ORF106788 - 0.33 11.2 3.9 0.49 10.7 3.9 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain V_ATPase_I PF01496.19 ORF106788 - 2.4 6.0 11.4 3.1 5.6 11.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Neur_chan_memb PF02932.16 ORF106429 - 1.3 9.0 5.8 1.9 8.5 5.8 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region HEAT PF02985.22 ORF105479 - 4.3e-08 32.7 4.2 0.0001 22.3 0.0 2.9 3 0 0 3 3 2 2 HEAT repeat zf-RING_2 PF13639.6 ORF105479 - 1.3e-06 28.6 16.7 3.2e-06 27.4 16.7 1.7 1 0 0 1 1 1 1 Ring finger domain HEAT_2 PF13646.6 ORF105479 - 2.4e-06 27.8 4.5 0.0054 17.1 0.3 2.2 1 1 1 2 2 2 2 HEAT repeats zf-RING_UBOX PF13445.6 ORF105479 - 5.1e-06 26.4 14.3 1e-05 25.4 14.3 1.6 1 0 0 1 1 1 1 RING-type zinc-finger HEAT_EZ PF13513.6 ORF105479 - 1.2e-05 25.7 3.9 0.0032 18.0 0.3 2.8 3 0 0 3 3 2 2 HEAT-like repeat zf-ANAPC11 PF12861.7 ORF105479 - 4.1e-05 23.5 7.7 8.2e-05 22.6 7.7 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF105479 - 6.5e-05 22.7 13.9 0.00015 21.6 13.9 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Arm PF00514.23 ORF105479 - 0.00026 20.9 1.3 0.094 12.8 0.0 2.9 3 0 0 3 3 3 1 Armadillo/beta-catenin-like repeat zf-rbx1 PF12678.7 ORF105479 - 0.00057 20.1 18.8 0.0016 18.7 18.8 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF105479 - 0.002 18.0 13.0 0.0044 17.0 13.0 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF105479 - 0.0029 17.3 7.8 0.025 14.3 7.8 2.4 1 1 0 1 1 1 1 RING-like zinc finger Cnd1 PF12717.7 ORF105479 - 0.018 15.1 0.0 1.5 8.9 0.0 2.1 2 0 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 zf-C3HC4_3 PF13920.6 ORF105479 - 0.025 14.4 11.9 0.058 13.3 11.9 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF105479 - 0.036 14.2 9.0 0.12 12.5 9.0 2.0 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Vac14_Fab1_bd PF12755.7 ORF105479 - 0.13 12.9 0.0 3.1 8.4 0.0 2.2 1 1 0 1 1 1 0 Vacuolar 14 Fab1-binding region zf-C3HC4_2 PF13923.6 ORF105479 - 0.96 9.3 20.9 27 4.7 20.9 2.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF105479 - 3.9 7.2 15.4 15 5.3 15.4 2.0 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zinc-ribbons_6 PF07191.12 ORF105479 - 4 7.5 10.1 2.6 8.1 3.2 2.5 1 1 1 2 2 2 0 zinc-ribbons OAD_gamma PF04277.13 ORF103815 - 0.017 15.7 1.6 0.13 12.9 0.0 2.6 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain DUF3043 PF11241.8 ORF103815 - 0.036 14.1 0.1 7 6.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3043) DUF5535 PF17687.1 ORF103815 - 0.11 12.6 0.4 6.4 7.0 0.1 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5535) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks68.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks68.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks68.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks68.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- 7tm_3 PF00003.22 ORF103282 - 0.0072 16.1 0.3 0.0084 15.9 0.3 1.1 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR MscS_TM PF12794.7 ORF103282 - 0.014 14.3 0.2 0.021 13.7 0.2 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 CttA_N PF18244.1 ORF103282 - 0.016 15.6 0.0 0.032 14.7 0.0 1.5 1 0 0 1 1 1 0 Cellulose-binding protein CttA N-terminal domain DUF2207 PF09972.9 ORF103282 - 0.081 11.7 0.1 0.1 11.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MARVEL PF01284.23 ORF103282 - 0.16 12.0 3.8 0.23 11.5 3.8 1.2 1 0 0 1 1 1 0 Membrane-associating domain DUF4239 PF14023.6 ORF103282 - 0.2 11.4 0.4 0.3 10.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF2273 PF10031.9 ORF103282 - 9.4 6.3 8.5 0.78 9.8 0.4 2.2 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) CAP_N PF01213.19 NODE_28205_length_764_cov_197.168724_g21993_i1forward_frame_1 - 2.4 7.5 5.0 1.3 8.5 3.2 1.6 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) N terminal Ras PF00071.22 NODE_28115_length_766_cov_218.034200_g22103_i0reverse_frame_3 - 0.0008 19.0 0.9 0.042 13.4 0.9 2.5 1 1 0 1 1 1 1 Ras family AAA_24 PF13479.6 NODE_28115_length_766_cov_218.034200_g22103_i0reverse_frame_3 - 0.007 16.1 0.2 0.18 11.5 0.0 2.8 2 1 1 3 3 3 1 AAA domain MMR_HSR1 PF01926.23 NODE_28115_length_766_cov_218.034200_g22103_i0reverse_frame_3 - 0.03 14.4 0.6 0.077 13.1 0.0 2.0 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_22 PF13401.6 NODE_28115_length_766_cov_218.034200_g22103_i0reverse_frame_3 - 0.041 14.2 0.0 4.4 7.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 NODE_28115_length_766_cov_218.034200_g22103_i0reverse_frame_3 - 0.071 13.7 0.1 0.21 12.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain Cytochrome-c551 PF10643.9 NODE_28115_length_766_cov_218.034200_g22103_i0forward_frame_3 - 0.39 10.3 6.1 0.7 9.4 6.1 1.4 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 dUTPase PF00692.19 NODE_28109_length_766_cov_308.619699_g22098_i0reverse_frame_3 - 0.02 14.5 0.3 1.5 8.5 0.0 2.3 1 1 0 2 2 2 0 dUTPase Kazal_1 PF00050.21 NODE_28109_length_766_cov_308.619699_g22098_i0reverse_frame_3 - 0.051 13.6 4.5 1.5 8.9 0.7 3.3 3 0 0 3 3 3 0 Kazal-type serine protease inhibitor domain Tom6 PF17112.5 NODE_28109_length_766_cov_308.619699_g22098_i0reverse_frame_3 - 0.08 12.5 4.2 17 5.0 0.1 3.9 4 0 0 4 4 4 0 Mitochondrial import receptor subunit Tom6, fungal HXXEE PF13787.6 NODE_28109_length_766_cov_308.619699_g22098_i0reverse_frame_3 - 0.7 10.7 3.7 39 5.1 0.1 3.8 2 1 0 4 4 4 0 Protein of unknown function with HXXEE motif Integrase_H2C2 PF17921.1 NODE_28109_length_766_cov_308.619699_g22098_i0reverse_frame_3 - 2.1 8.5 0.0 2.1 8.5 0.0 3.6 4 0 0 4 4 4 0 Integrase zinc binding domain RCC1_2 PF13540.6 NODE_28109_length_766_cov_308.619699_g22098_i0reverse_frame_2 - 3.1e-08 33.2 18.3 0.28 11.0 0.2 5.5 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 NODE_28109_length_766_cov_308.619699_g22098_i0reverse_frame_2 - 0.00055 20.2 0.2 3.4 8.0 0.0 3.9 2 1 2 4 4 4 2 TFIIH p62 subunit, N-terminal domain Cerato-platanin PF07249.12 NODE_28109_length_766_cov_308.619699_g22098_i0reverse_frame_2 - 1.3 9.1 7.0 2.4 8.3 0.2 3.3 1 1 1 3 3 3 0 Cerato-platanin MipA PF06629.12 NODE_28102_length_767_cov_2.426230_g22093_i0reverse_frame_2 - 5.8e-38 131.3 11.3 6.7e-38 131.1 11.3 1.0 1 0 0 1 1 1 1 MltA-interacting protein MipA STIL_N PF15253.6 NODE_28099_length_767_cov_3.027322_g22090_i0reverse_frame_2 - 0.00025 20.1 0.6 0.0018 17.3 0.9 1.9 2 0 0 2 2 2 1 SCL-interrupting locus protein N-terminus Mating_N PF12731.7 NODE_28098_length_767_cov_3.118852_g22089_i0reverse_frame_2 - 0.029 14.4 3.4 0.58 10.3 0.4 3.1 1 1 1 2 2 2 0 Mating-type protein beta 1 bacHORMA_1 PF18138.1 NODE_28098_length_767_cov_3.118852_g22089_i0reverse_frame_2 - 0.069 13.0 0.1 0.16 11.8 0.1 1.6 1 0 0 1 1 1 0 Bacterial HORMA domain family 1 ApoLp-III PF07464.11 NODE_28098_length_767_cov_3.118852_g22089_i0reverse_frame_2 - 0.51 10.4 8.8 0.052 13.6 3.2 2.2 2 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Prominin PF05478.11 NODE_28098_length_767_cov_3.118852_g22089_i0reverse_frame_2 - 0.94 7.4 8.8 1.1 7.1 8.8 1.1 1 0 0 1 1 1 0 Prominin Apolipoprotein PF01442.18 NODE_28098_length_767_cov_3.118852_g22089_i0reverse_frame_2 - 1.6 8.6 13.6 0.2 11.5 8.3 2.3 2 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain bZIP_2 PF07716.15 NODE_28098_length_767_cov_3.118852_g22089_i0reverse_frame_2 - 9.1 6.5 13.8 4.8 7.3 4.2 2.7 2 0 0 2 2 2 0 Basic region leucine zipper PhoQ_Sensor PF08918.10 NODE_28098_length_767_cov_3.118852_g22089_i0forward_frame_2 - 0.032 14.1 2.1 0.052 13.4 2.1 1.3 1 0 0 1 1 1 0 PhoQ Sensor Peptidase_U32 PF01136.19 NODE_28096_length_767_cov_3.356557_g22087_i0reverse_frame_2 - 4.3e-81 271.5 0.0 5.5e-81 271.1 0.0 1.1 1 0 0 1 1 1 1 Peptidase family U32 Nup35_RRM_2 PF14605.6 NODE_28096_length_767_cov_3.356557_g22087_i0reverse_frame_2 - 0.011 15.8 0.1 1.2 9.1 0.0 2.7 2 1 0 2 2 2 0 Nup53/35/40-type RNA recognition motif Tachystatin_B PF11478.8 NODE_28096_length_767_cov_3.356557_g22087_i0reverse_frame_2 - 0.039 13.9 0.6 0.066 13.2 0.6 1.3 1 0 0 1 1 1 0 Antimicrobial chitin binding protein tachystatin B XPA_C PF05181.12 NODE_28087_length_767_cov_103.150273_g22080_i0forward_frame_3 - 0.061 13.3 5.2 0.35 10.8 0.0 3.2 3 0 0 3 3 3 0 XPA protein C-terminus MutS_III PF05192.18 NODE_28079_length_767_cov_138.956284_g22073_i0reverse_frame_3 - 8.4e-28 97.9 0.8 1.3e-27 97.3 0.8 1.3 1 0 0 1 1 1 1 MutS domain III MutS_II PF05188.17 NODE_28079_length_767_cov_138.956284_g22073_i0reverse_frame_3 - 0.0055 17.0 0.5 0.12 12.6 0.0 2.8 2 1 0 2 2 2 1 MutS domain II Cdc13_OB2 PF18691.1 NODE_28079_length_767_cov_138.956284_g22073_i0reverse_frame_3 - 0.014 15.4 1.9 0.025 14.7 1.9 1.4 1 0 0 1 1 1 0 Cell division control protein 13, OB2 domain Synaptobrevin PF00957.21 NODE_28075_length_767_cov_159.919399_g20934_i1reverse_frame_3 - 1.6e-12 47.0 1.9 3.4e-12 46.0 1.9 1.6 1 0 0 1 1 1 1 Synaptobrevin DUF2207 PF09972.9 NODE_28075_length_767_cov_159.919399_g20934_i1reverse_frame_3 - 0.0052 15.6 2.6 0.0079 15.0 2.6 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Orf78 PF06024.12 NODE_28075_length_767_cov_159.919399_g20934_i1reverse_frame_3 - 0.0071 16.6 0.4 0.016 15.5 0.4 1.6 1 0 0 1 1 1 1 Orf78 (ac78) Herpes_US9 PF06072.11 NODE_28075_length_767_cov_159.919399_g20934_i1reverse_frame_3 - 0.011 15.6 0.7 0.026 14.4 0.7 1.6 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 Renin_r PF07850.14 NODE_28075_length_767_cov_159.919399_g20934_i1reverse_frame_3 - 0.026 15.1 0.2 0.06 14.0 0.2 1.7 1 0 0 1 1 1 0 Renin receptor-like protein PH_17 PF18012.1 NODE_28075_length_767_cov_159.919399_g20934_i1forward_frame_3 - 0.11 12.3 0.5 4.8 7.0 0.2 2.5 2 0 0 2 2 2 0 PH domain CG-1 PF03859.16 NODE_28052_length_768_cov_4.064120_g22051_i0reverse_frame_2 - 0.071 12.9 0.1 0.42 10.4 0.0 2.1 2 0 0 2 2 2 0 CG-1 domain PHC2_SAM_assoc PF16616.5 NODE_28052_length_768_cov_4.064120_g22051_i0reverse_frame_2 - 0.52 11.1 0.1 0.52 11.1 0.1 2.2 2 0 0 2 2 2 0 Unstructured region on Polyhomeotic-like protein 1 and 2 MatC_N PF07158.11 NODE_28035_length_768_cov_122.538881_g22035_i0forward_frame_3 - 0.092 12.8 3.7 0.14 12.2 3.7 1.2 1 0 0 1 1 1 0 Dicarboxylate carrier protein MatC N-terminus Ldh_2 PF02615.14 ORF99350 - 1.7e-63 214.8 1.3 1.9e-63 214.7 1.3 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase zf-RING_2 PF13639.6 ORF93212 - 1.8e-09 37.7 13.8 3.5e-09 36.9 13.8 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF93212 - 8.3e-08 32.0 15.7 1.3e-07 31.4 15.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF93212 - 2.2e-06 27.4 15.1 4.1e-06 26.5 15.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF93212 - 2e-05 24.3 12.8 5e-05 23.1 12.8 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF93212 - 2.3e-05 24.1 14.1 4.5e-05 23.2 14.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF93212 - 0.00065 19.9 10.0 0.0014 18.9 10.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 ORF93212 - 0.00082 19.5 12.1 0.002 18.2 12.1 1.6 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-RING_5 PF14634.6 ORF93212 - 0.0012 18.8 16.2 0.0025 17.7 16.2 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Baculo_RING PF05883.11 ORF93212 - 0.0037 17.2 5.5 0.0095 15.9 5.5 1.8 1 1 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4_4 PF15227.6 ORF93212 - 0.016 15.4 10.6 0.041 14.0 10.6 1.7 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF93212 - 0.02 14.9 8.3 0.045 13.8 8.3 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_4 PF14570.6 ORF93212 - 0.028 14.2 16.0 0.062 13.1 16.0 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Pro_CA PF00484.19 ORF93212 - 0.096 13.0 3.3 0.099 12.9 0.8 1.9 1 1 1 2 2 2 0 Carbonic anhydrase zf-C3HC4_5 PF17121.5 ORF93212 - 1.7 8.6 11.5 6.2 6.8 11.5 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) PhyH PF05721.13 ORF91971 - 1.4e-06 28.8 0.0 2.3e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Sel1 PF08238.12 ORF91971 - 0.081 13.6 0.2 12 6.8 0.0 2.8 2 0 0 2 2 2 0 Sel1 repeat MAGE_N PF12440.8 ORF89970 - 1.3 9.8 23.0 0.21 12.3 15.0 2.4 2 0 0 2 2 2 0 Melanoma associated antigen family N terminal Mito_fiss_reg PF05308.11 ORF89970 - 7.7 6.5 9.3 0.57 10.2 4.6 1.4 2 0 0 2 2 2 0 Mitochondrial fission regulator 2OG-FeII_Oxy_5 PF13759.6 ORF88522 - 4.8e-14 52.6 0.2 7.8e-14 51.9 0.2 1.4 1 0 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase SHIPPO-rpt PF07004.12 ORF85083 - 0.057 14.3 31.8 0.16 12.9 1.2 5.7 6 0 0 6 6 6 0 Sperm-tail PG-rich repeat ABC_tran PF00005.27 ORF84159 - 2.2e-32 112.4 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 ORF84159 - 7.8e-11 41.6 0.1 2e-10 40.3 0.1 1.8 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 ORF84159 - 2.6e-07 30.8 0.4 0.0022 17.8 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 ORF84159 - 4.8e-05 23.9 0.4 0.00011 22.8 0.5 1.7 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 ORF84159 - 0.00016 21.5 0.3 0.093 12.4 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 ORF84159 - 0.0011 18.5 0.1 0.25 10.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF84159 - 0.0011 19.2 1.1 0.034 14.4 1.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF84159 - 0.003 18.0 0.4 0.0099 16.3 0.4 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 ORF84159 - 0.016 14.9 0.0 0.035 13.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 ORF84159 - 0.027 14.2 0.0 0.24 11.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 ORF84159 - 0.058 13.0 0.2 0.21 11.2 0.0 1.9 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain FeoB_N PF02421.18 ORF84159 - 0.064 12.8 0.1 0.12 11.9 0.1 1.4 1 0 0 1 1 1 0 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF84159 - 0.086 12.7 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 ORF84159 - 0.089 12.9 0.0 0.15 12.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF84159 - 0.12 12.4 0.0 0.48 10.5 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase RRM_1 PF00076.22 ORF82947 - 4.3e-11 42.5 0.0 8.1e-11 41.6 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Torus PF16131.5 ORF82947 - 3.4e-08 34.2 0.8 1.8e-07 31.8 0.1 2.1 2 0 0 2 2 2 1 Torus domain zf_CCCH_4 PF18345.1 ORF82947 - 4.4e-06 26.6 3.1 9e-06 25.6 3.1 1.6 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 ORF82947 - 0.00019 21.2 0.8 0.00034 20.4 0.8 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Nup35_RRM_2 PF14605.6 ORF82947 - 0.0012 18.8 0.0 0.0024 17.8 0.0 1.6 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif zf-CCCH_4 PF18044.1 ORF82947 - 0.0032 17.2 2.6 0.0063 16.3 2.6 1.5 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF82947 - 0.0035 17.6 0.3 0.011 15.9 0.1 1.8 2 0 0 2 2 2 1 Zinc-finger containing family RRM_3 PF08777.11 ORF82947 - 0.019 15.0 0.0 0.033 14.2 0.0 1.4 1 0 0 1 1 1 0 RNA binding motif zf-CCCH_2 PF14608.6 ORF82947 - 0.029 14.9 2.3 0.057 13.9 2.3 1.5 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger RNA_bind PF08675.11 ORF82947 - 0.049 13.7 0.0 0.093 12.8 0.0 1.4 1 0 0 1 1 1 0 RNA binding domain NID PF07292.13 ORF82947 - 0.12 13.1 0.1 0.21 12.2 0.1 1.4 1 0 0 1 1 1 0 Nmi/IFP 35 domain (NID) Pkinase PF00069.25 ORF80115 - 8.1e-15 54.9 0.0 1.2e-14 54.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF80115 - 0.0034 16.7 0.0 0.0051 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase RCC1_2 PF13540.6 ORF79611 - 3.1e-16 58.7 9.3 0.0046 16.7 0.1 5.6 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat Peptidase_M23 PF01551.22 ORF79611 - 0.0066 16.6 0.6 0.14 12.4 0.1 2.8 2 1 1 3 3 3 1 Peptidase family M23 ADK PF00406.22 ORF79287 - 3.8e-06 27.1 0.0 6.4e-06 26.3 0.0 1.4 1 1 0 1 1 1 1 Adenylate kinase Zn-ribbon_8 PF09723.10 ORF79287 - 0.03 14.4 0.2 0.087 13.0 0.2 1.8 1 1 0 1 1 1 0 Zinc ribbon domain A2L_zn_ribbon PF08792.10 ORF79287 - 0.039 13.7 2.1 0.78 9.5 0.1 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF4849 PF16141.5 ORF79287 - 0.072 12.3 0.3 0.14 11.4 0.1 1.5 2 0 0 2 2 2 0 Putative glycoside hydrolase Family 18, chitinase_18 ADK_lid PF05191.14 ORF79287 - 0.078 13.0 0.9 0.21 11.6 0.9 1.7 1 0 0 1 1 1 0 Adenylate kinase, active site lid DUF35_N PF12172.8 ORF79287 - 0.12 12.2 1.0 16 5.5 0.0 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Mut7-C PF01927.16 ORF79287 - 0.17 12.0 0.0 0.36 10.9 0.0 1.5 1 0 0 1 1 1 0 Mut7-C RNAse domain zf-C2H2_3 PF13878.6 ORF79287 - 0.29 11.0 1.7 0.51 10.2 0.2 2.1 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO Thioredoxin_6 PF13848.6 ORF76772 - 6.9e-08 32.6 3.0 0.0012 18.8 0.1 3.3 3 1 0 3 3 3 2 Thioredoxin-like domain ERp29_N PF07912.13 ORF76772 - 0.012 15.7 0.2 0.25 11.5 0.0 2.2 2 0 0 2 2 2 0 ERp29, N-terminal domain PP2C PF00481.21 ORF75096 - 3.3e-51 174.4 0.0 3.7e-51 174.2 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF75096 - 0.036 14.0 0.0 0.57 10.1 0.0 2.0 2 0 0 2 2 2 0 Stage II sporulation protein E (SpoIIE) Asp_Arg_Hydrox PF05118.15 ORF73895 - 3.6e-22 78.9 0.9 6.1e-22 78.1 0.9 1.3 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase Transket_pyr PF02779.24 ORF73720 - 9.3e-32 110.1 0.4 1.8e-31 109.2 0.4 1.5 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF73720 - 2.2e-21 76.0 0.0 3.8e-21 75.2 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain XFP_C PF09363.10 ORF73720 - 0.19 11.2 0.0 0.29 10.6 0.0 1.2 1 0 0 1 1 1 0 XFP C-terminal domain Topoisom_bac PF01131.20 ORF69473 - 2.9e-29 102.3 0.3 3.7e-29 102.0 0.3 1.1 1 0 0 1 1 1 1 DNA topoisomerase KN_motif PF12075.8 ORF69473 - 0.092 12.6 0.1 0.23 11.3 0.1 1.7 1 0 0 1 1 1 0 KN motif Endonuc_subdom PF09062.10 ORF69473 - 0.21 12.4 2.4 0.5 11.2 1.9 1.9 1 1 0 1 1 1 0 PI-PfuI Endonuclease subdomain Nuc_sug_transp PF04142.15 ORF69203 - 1.4e-18 67.1 14.1 2e-18 66.6 14.1 1.2 1 0 0 1 1 1 1 Nucleotide-sugar transporter UAA PF08449.11 ORF69203 - 0.00017 20.9 7.1 0.00034 19.9 7.1 1.6 1 1 0 1 1 1 1 UAA transporter family DUF423 PF04241.15 ORF69203 - 1.4 9.2 5.8 0.3 11.3 0.3 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF423) zf-RING_2 PF13639.6 ORF69039 - 1.8e-09 37.7 13.8 3.5e-09 36.9 13.8 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF69039 - 8.3e-08 32.0 15.7 1.3e-07 31.4 15.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF69039 - 2.2e-06 27.4 15.1 4.1e-06 26.5 15.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF69039 - 2e-05 24.3 12.8 5e-05 23.1 12.8 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF69039 - 2.3e-05 24.1 14.1 4.5e-05 23.2 14.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF69039 - 0.00065 19.9 10.0 0.0014 18.9 10.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 ORF69039 - 0.00082 19.5 12.1 0.002 18.2 12.1 1.6 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-RING_5 PF14634.6 ORF69039 - 0.0012 18.8 16.2 0.0025 17.7 16.2 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Baculo_RING PF05883.11 ORF69039 - 0.0037 17.2 5.5 0.0095 15.9 5.5 1.8 1 1 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4_4 PF15227.6 ORF69039 - 0.016 15.4 10.6 0.041 14.0 10.6 1.7 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF69039 - 0.02 14.9 8.3 0.045 13.8 8.3 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_4 PF14570.6 ORF69039 - 0.028 14.2 16.0 0.062 13.1 16.0 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Pro_CA PF00484.19 ORF69039 - 0.096 13.0 3.3 0.099 12.9 0.8 1.9 1 1 1 2 2 2 0 Carbonic anhydrase zf-C3HC4_5 PF17121.5 ORF69039 - 1.7 8.6 11.5 6.2 6.8 11.5 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) ABC_tran PF00005.27 ORF67792 - 1.8e-33 115.9 0.0 2.6e-33 115.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF67792 - 4e-12 46.6 0.3 2.7e-05 24.1 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF67792 - 2.4e-09 37.0 0.0 0.00062 19.3 0.0 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF67792 - 6.8e-07 28.9 0.1 1.5e-06 27.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF67792 - 8.6e-06 25.7 0.0 0.00029 20.7 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 ORF67792 - 2.3e-05 25.0 0.1 3.4e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF67792 - 4.2e-05 24.0 0.0 7.6e-05 23.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF67792 - 0.00028 20.8 0.1 0.0006 19.8 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 ORF67792 - 0.0021 18.1 0.1 0.054 13.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF67792 - 0.0035 17.6 0.1 0.015 15.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF67792 - 0.007 16.0 0.3 0.025 14.1 0.0 1.9 1 1 0 2 2 2 1 AAA domain ThiS PF02597.20 ORF67792 - 0.0073 16.9 0.1 1.9 9.2 0.0 2.6 2 1 0 2 2 2 1 ThiS family Rad17 PF03215.15 ORF67792 - 0.0087 16.0 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_14 PF13173.6 ORF67792 - 0.0095 16.0 0.0 0.11 12.6 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_27 PF13514.6 ORF67792 - 0.01 15.4 0.0 0.061 12.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain Adeno_IVa2 PF02456.15 ORF67792 - 0.027 13.3 0.2 0.054 12.3 0.0 1.5 2 0 0 2 2 2 0 Adenovirus IVa2 protein DUF2813 PF11398.8 ORF67792 - 0.043 13.1 0.1 0.1 11.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) AAA_33 PF13671.6 ORF67792 - 0.064 13.4 0.3 0.52 10.5 0.2 2.3 1 1 1 2 2 2 0 AAA domain Mg_chelatase PF01078.21 ORF67792 - 0.073 12.4 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MukB PF04310.12 ORF67792 - 0.076 12.8 0.2 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 MukB N-terminal AAA_28 PF13521.6 ORF67792 - 0.094 13.0 0.0 0.28 11.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF67792 - 0.14 12.6 0.0 0.33 11.3 0.0 1.6 2 0 0 2 2 1 0 RNA helicase NACHT PF05729.12 ORF67792 - 0.14 12.0 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ABC_ATPase PF09818.9 ORF67792 - 0.15 10.9 0.1 0.68 8.7 0.0 1.8 2 0 0 2 2 2 0 Predicted ATPase of the ABC class ATPase_2 PF01637.18 ORF67792 - 0.16 11.9 0.0 0.61 10.0 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea HSP70 PF00012.20 ORF66929 - 6.1e-63 213.0 0.1 7.3e-63 212.7 0.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF66929 - 1.7e-16 60.0 0.1 4.3e-16 58.6 0.1 1.6 1 1 0 1 1 1 1 MreB/Mbl protein StbA PF06406.11 ORF66929 - 0.00022 20.6 0.1 0.00062 19.1 0.1 1.7 1 1 1 2 2 2 1 StbA protein ATP-synt_D PF01813.17 ORF66446 - 4.8e-61 206.0 1.5 6.6e-61 205.6 1.5 1.2 1 0 0 1 1 1 1 ATP synthase subunit D DUF4910 PF16254.5 ORF66446 - 0.16 10.8 0.0 0.23 10.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4910) DSBA PF01323.20 ORF64933 - 0.16 11.7 0.0 19 4.9 0.0 2.3 2 0 0 2 2 2 0 DSBA-like thioredoxin domain SUIM_assoc PF16619.5 ORF63395 - 0.5 10.5 5.1 1.1 9.4 5.1 1.5 1 0 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 EAL PF00563.20 ORF63025 - 5.3e-30 104.7 0.0 7.1e-30 104.3 0.0 1.1 1 0 0 1 1 1 1 EAL domain Abhydrolase_6 PF12697.7 ORF61016 - 1.3e-06 29.2 0.2 1.6e-06 28.9 0.2 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF61016 - 0.027 14.6 0.0 0.045 13.9 0.0 1.5 1 1 0 1 1 1 0 Thioesterase domain Hydrolase_4 PF12146.8 ORF61016 - 0.04 13.2 0.0 0.055 12.7 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Ser_hydrolase PF06821.13 ORF61016 - 0.11 12.3 0.0 0.25 11.2 0.0 1.5 2 0 0 2 2 2 0 Serine hydrolase Abhydrolase_1 PF00561.20 ORF61016 - 0.16 11.6 0.0 0.33 10.6 0.0 1.5 2 0 0 2 2 2 0 alpha/beta hydrolase fold 2OG-FeII_Oxy_3 PF13640.6 ORF60954 - 6.5e-12 46.2 0.1 4.8e-11 43.4 0.0 2.2 2 1 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily MFS_1 PF07690.16 ORF60178 - 1.1e-07 31.1 8.2 1.8e-07 30.4 8.2 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1652 PF07865.11 ORF59271 - 0.039 13.8 0.0 0.07 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) HypA PF01155.19 ORF59271 - 3.7 7.6 16.5 13 5.8 0.0 3.2 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C2 PF00168.30 ORF58935 - 1.1e-13 51.3 0.1 1.5e-13 50.9 0.1 1.2 1 0 0 1 1 1 1 C2 domain CARD_2 PF16739.5 ORF58206 - 0.04 13.9 0.2 0.36 10.8 0.2 2.4 2 1 0 2 2 2 0 Caspase recruitment domain ERM PF00769.19 ORF57974 - 0.0018 18.1 6.6 0.0018 18.1 6.6 2.0 1 1 0 1 1 1 1 Ezrin/radixin/moesin family VP9 PF09625.10 ORF57974 - 0.019 15.1 0.3 0.019 15.1 0.3 2.4 2 0 0 2 2 2 0 VP9 protein Rootletin PF15035.6 ORF57974 - 0.044 13.8 12.7 0.076 13.0 11.8 1.8 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion Uso1_p115_C PF04871.13 ORF57974 - 0.067 13.6 0.3 0.067 13.6 0.3 3.0 3 1 0 3 3 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region CEP209_CC5 PF16574.5 ORF57974 - 0.13 12.4 21.6 0.031 14.4 12.5 2.8 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 TMF_TATA_bd PF12325.8 ORF57974 - 0.14 12.4 17.9 0.026 14.7 9.1 2.6 3 0 0 3 3 3 0 TATA element modulatory factor 1 TATA binding YtxH PF12732.7 ORF57974 - 0.22 12.1 1.2 23 5.6 1.2 2.8 1 1 0 1 1 1 0 YtxH-like protein UPF0242 PF06785.11 ORF57974 - 0.26 11.4 15.8 1.9 8.6 8.2 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Cnn_1N PF07989.11 ORF57974 - 0.82 9.9 27.0 1.8 8.8 5.7 2.8 3 0 0 3 3 2 0 Centrosomin N-terminal motif 1 AKNA PF12443.8 ORF57974 - 0.98 10.1 7.4 3 8.5 0.2 2.9 2 1 0 2 2 2 0 AT-hook-containing transcription factor Lebercilin PF15619.6 ORF57974 - 1.3 8.7 23.3 0.036 13.7 5.4 3.6 3 1 1 4 4 4 0 Ciliary protein causing Leber congenital amaurosis disease Ly49 PF08391.10 ORF57974 - 1.5 9.2 11.3 0.22 11.9 3.8 2.4 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region Cep57_CLD_2 PF14197.6 ORF57974 - 1.6 8.9 19.2 0.081 13.0 2.7 3.3 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 Phage_GP20 PF06810.11 ORF57974 - 1.9 8.3 21.0 0.67 9.7 2.3 3.1 3 1 0 3 3 3 0 Phage minor structural protein GP20 Ead_Ea22 PF13935.6 ORF57974 - 2 9.1 11.3 7.9 7.1 4.6 2.4 1 1 1 2 2 2 0 Ead/Ea22-like protein DUF3450 PF11932.8 ORF57974 - 2.2 7.5 9.7 0.42 9.9 4.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) PhoU PF01895.19 ORF57974 - 2.5 8.6 8.8 4 8.0 1.6 2.5 2 0 0 2 2 2 0 PhoU domain DUF1664 PF07889.12 ORF57974 - 7 6.7 7.0 11 6.1 0.7 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) Tup_N PF08581.10 ORF57974 - 7.4 7.0 18.3 1.4 9.3 5.6 2.9 3 0 0 3 3 2 0 Tup N-terminal Troponin PF00992.20 ORF57974 - 7.5 6.9 26.4 3.2 8.1 12.3 2.9 2 1 1 3 3 3 0 Troponin Acetyltransf_10 PF13673.7 ORF57531 - 1.7e-09 37.6 0.1 3.6e-09 36.6 0.0 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF57531 - 1.6e-08 34.8 0.0 2.8e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF57531 - 1.5e-05 25.3 0.0 2.3e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF57531 - 0.00012 22.0 0.1 0.00019 21.3 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 ORF57531 - 0.065 13.4 0.2 0.17 12.0 0.0 1.7 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 ORF57531 - 0.084 13.5 0.0 0.13 12.9 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain BshC PF10079.9 ORF57460 - 3.2 6.4 8.4 3.5 6.2 0.2 2.0 2 0 0 2 2 2 0 Bacillithiol biosynthesis BshC Stevor PF17410.2 ORF57460 - 6.4 6.2 11.3 0.13 11.8 0.9 2.1 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame UvrD_C PF13361.6 ORF56394 - 2.1e-12 47.1 0.0 2e-06 27.5 0.0 2.9 1 1 1 2 2 2 2 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 ORF56394 - 7.3e-07 28.9 0.0 0.0044 16.8 0.0 2.4 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_12 PF13087.6 ORF56394 - 0.00072 19.2 0.1 0.32 10.6 0.1 2.6 1 1 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF56394 - 0.011 15.5 0.0 0.38 10.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase EI24 PF07264.11 ORF55283 - 0.00087 19.6 2.1 0.0012 19.1 2.1 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) DUF1896 PF08989.10 ORF55283 - 0.083 13.0 1.3 0.17 12.0 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1896) Usher PF00577.20 ORF52523 - 2.7e-42 145.4 3.3 3.2e-42 145.1 3.3 1.0 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF52523 - 1.5e-12 47.1 0.0 3.3e-11 42.8 0.0 2.3 2 0 0 2 2 2 1 PapC C-terminal domain Kelch_5 PF13854.6 ORF51254 - 1.1e-16 60.4 0.5 5.4e-08 32.6 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 ORF51254 - 7.4e-11 42.1 2.6 0.0013 19.0 0.1 4.1 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF51254 - 5.9e-10 39.0 0.4 0.0014 18.5 0.1 2.3 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF51254 - 1.3e-09 37.5 0.3 0.00064 19.3 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF51254 - 2.8e-09 36.9 0.1 9e-05 22.6 0.0 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 ORF51254 - 1.6e-05 24.7 2.1 0.0098 15.8 0.1 2.9 3 0 0 3 3 3 2 Kelch motif PBP_N PF17093.5 ORF51254 - 0.28 11.4 3.9 0.51 10.6 3.9 1.4 1 0 0 1 1 1 0 Penicillin-binding protein N-terminus WES_acyltransf PF03007.16 ORF51078 - 1.1e-09 38.5 0.0 1.6e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 ORF51078 - 0.02 13.6 0.3 0.037 12.7 0.3 1.4 1 0 0 1 1 1 0 Condensation domain SwrA PF17423.2 ORF51078 - 0.13 12.2 0.7 0.32 11.0 0.1 1.9 2 0 0 2 2 2 0 Swarming motility protein SecD-TM1 PF13721.6 ORF51078 - 0.14 12.6 0.0 0.23 12.0 0.0 1.4 1 0 0 1 1 1 0 SecD export protein N-terminal TM region TPR_8 PF13181.6 ORF50109 - 0.033 14.4 0.6 0.19 12.1 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat adh_short PF00106.25 ORF4846 - 1.2e-11 44.4 0.0 2.9e-08 33.4 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF4846 - 1.1e-09 38.2 0.0 1.8e-06 27.7 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase BshC PF10079.9 ORF46097 - 3.2 6.4 8.4 3.5 6.2 0.2 2.0 2 0 0 2 2 2 0 Bacillithiol biosynthesis BshC Stevor PF17410.2 ORF46097 - 6.4 6.2 11.3 0.13 11.8 0.9 2.1 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame NPHI_C PF08469.10 ORF43096 - 0.1 12.5 0.3 0.1 12.5 0.3 2.1 1 1 0 2 2 2 0 Nucleoside triphosphatase I C-terminal Coatomer_WDAD PF04053.14 ORF41185 - 2.4e-62 211.4 2.8 2.7e-62 211.3 2.8 1.0 1 0 0 1 1 1 1 Coatomer WD associated region TPR_8 PF13181.6 ORF41185 - 0.016 15.3 0.9 0.2 11.9 0.0 2.9 1 1 1 2 2 2 0 Tetratricopeptide repeat DUF4844 PF16133.5 ORF41185 - 0.045 14.3 0.3 0.084 13.4 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4844) TPR_2 PF07719.17 ORF41185 - 0.23 11.6 2.6 0.58 10.4 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat FA_desaturase PF00487.24 ORF40295 - 1.5e-24 87.3 11.4 1.8e-24 86.9 11.4 1.1 1 0 0 1 1 1 1 Fatty acid desaturase DUF1604 PF07713.13 ORF38124 - 0.73 9.7 6.2 0.077 12.8 1.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1604) ATP11 PF06644.11 ORF38124 - 2.4 7.9 8.9 0.38 10.5 4.5 1.7 1 1 1 2 2 2 0 ATP11 protein TIM PF00121.18 ORF37938 - 2.5e-93 312.0 0.4 2.8e-93 311.8 0.4 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase EI24 PF07264.11 ORF36639 - 0.00087 19.6 2.1 0.0012 19.1 2.1 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) DUF1896 PF08989.10 ORF36639 - 0.083 13.0 1.3 0.17 12.0 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1896) MORN PF02493.20 ORF34626 - 2.1e-25 87.1 34.5 1.4e-07 31.0 0.7 7.3 7 0 0 7 7 7 6 MORN repeat DUF3048_C PF17479.2 ORF34626 - 1.1 9.6 8.3 9.3 6.7 0.5 3.5 1 1 3 4 4 4 0 Protein of unknown function (DUF3048) C-terminal domain adh_short_C2 PF13561.6 ORF33827 - 7.3e-48 163.2 4.9 9.5e-48 162.8 4.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF33827 - 9.6e-48 162.2 5.0 1.2e-47 162.0 5.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF33827 - 3.7e-11 43.3 3.2 4.3e-10 39.8 3.2 2.1 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF33827 - 3.6e-05 23.4 1.2 6.9e-05 22.4 1.2 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF33827 - 0.0016 17.5 0.4 0.0023 17.0 0.4 1.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF33827 - 0.0061 16.0 0.3 0.018 14.5 0.1 1.8 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Sacchrp_dh_NADP PF03435.18 ORF33827 - 0.0085 16.3 0.6 0.015 15.5 0.6 1.4 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 ORF33827 - 0.017 15.2 0.0 0.033 14.2 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ADH_zinc_N PF00107.26 ORF33827 - 0.028 14.4 0.9 0.055 13.4 0.8 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 ORF33827 - 0.059 13.2 1.9 0.076 12.9 1.8 1.4 1 1 0 1 1 1 0 NAD(P)H-binding ABC_tran PF00005.27 ORF32258 - 5.6e-15 56.1 0.0 8.1e-15 55.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter T2SSE PF00437.20 ORF32258 - 0.0016 17.6 0.3 0.029 13.4 0.1 2.0 1 1 1 2 2 2 1 Type II/IV secretion system protein MMR_HSR1 PF01926.23 ORF32258 - 0.0076 16.3 0.2 0.013 15.6 0.2 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF87 PF01935.17 ORF32258 - 0.028 14.5 0.1 0.05 13.7 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Dynamin_N PF00350.23 ORF32258 - 0.029 14.5 0.1 0.056 13.5 0.1 1.4 1 0 0 1 1 1 0 Dynamin family RsgA_GTPase PF03193.16 ORF32258 - 0.045 13.6 0.3 0.071 13.0 0.3 1.2 1 0 0 1 1 1 0 RsgA GTPase FtsK_SpoIIIE PF01580.18 ORF32258 - 0.11 11.8 0.2 0.23 10.8 0.1 1.5 2 0 0 2 2 2 0 FtsK/SpoIIIE family ABC_tran PF00005.27 ORF3134 - 1.8e-33 115.9 0.0 2.6e-33 115.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF3134 - 4e-12 46.6 0.3 2.7e-05 24.1 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF3134 - 2.4e-09 37.0 0.0 0.00062 19.3 0.0 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF3134 - 6.8e-07 28.9 0.1 1.5e-06 27.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF3134 - 8.6e-06 25.7 0.0 0.00029 20.7 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 ORF3134 - 2.3e-05 25.0 0.1 3.4e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF3134 - 4.2e-05 24.0 0.0 7.6e-05 23.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF3134 - 0.00028 20.8 0.1 0.0006 19.8 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 ORF3134 - 0.0021 18.1 0.1 0.054 13.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF3134 - 0.0035 17.6 0.1 0.015 15.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF3134 - 0.007 16.0 0.3 0.025 14.1 0.0 1.9 1 1 0 2 2 2 1 AAA domain ThiS PF02597.20 ORF3134 - 0.0073 16.9 0.1 1.9 9.2 0.0 2.6 2 1 0 2 2 2 1 ThiS family Rad17 PF03215.15 ORF3134 - 0.0087 16.0 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_14 PF13173.6 ORF3134 - 0.0095 16.0 0.0 0.11 12.6 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_27 PF13514.6 ORF3134 - 0.01 15.4 0.0 0.061 12.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain Adeno_IVa2 PF02456.15 ORF3134 - 0.027 13.3 0.2 0.054 12.3 0.0 1.5 2 0 0 2 2 2 0 Adenovirus IVa2 protein DUF2813 PF11398.8 ORF3134 - 0.043 13.1 0.1 0.1 11.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) AAA_33 PF13671.6 ORF3134 - 0.064 13.4 0.3 0.52 10.5 0.2 2.3 1 1 1 2 2 2 0 AAA domain Mg_chelatase PF01078.21 ORF3134 - 0.073 12.4 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MukB PF04310.12 ORF3134 - 0.076 12.8 0.2 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 MukB N-terminal AAA_28 PF13521.6 ORF3134 - 0.094 13.0 0.0 0.28 11.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF3134 - 0.14 12.6 0.0 0.33 11.3 0.0 1.6 2 0 0 2 2 1 0 RNA helicase NACHT PF05729.12 ORF3134 - 0.14 12.0 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ABC_ATPase PF09818.9 ORF3134 - 0.15 10.9 0.1 0.68 8.7 0.0 1.8 2 0 0 2 2 2 0 Predicted ATPase of the ABC class ATPase_2 PF01637.18 ORF3134 - 0.16 11.9 0.0 0.61 10.0 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Telomere_reg-2 PF10193.9 ORF30944 - 0.71 10.3 2.5 1.7 9.1 0.0 2.7 4 0 0 4 4 4 0 Telomere length regulation protein MCPsignal PF00015.21 ORF30117 - 1.6e-46 158.3 16.9 1.6e-46 158.3 16.9 2.5 2 1 1 3 3 3 2 Methyl-accepting chemotaxis protein (MCP) signalling domain Mur_ligase_C PF02875.21 ORF30117 - 0.0017 18.6 3.0 0.0063 16.7 0.2 2.8 2 2 1 3 3 3 1 Mur ligase family, glutamate ligase domain DUF948 PF06103.11 ORF30117 - 0.0022 18.2 24.0 0.049 13.9 5.7 4.1 2 2 1 3 3 3 1 Bacterial protein of unknown function (DUF948) TMP_2 PF06791.13 ORF30117 - 0.005 16.5 10.3 0.005 16.5 10.3 2.3 1 1 1 2 2 2 1 Prophage tail length tape measure protein Goodbye PF17109.5 ORF30117 - 0.03 14.8 7.1 0.18 12.3 0.4 2.7 2 2 0 2 2 2 0 fungal STAND N-terminal Goodbye domain Sec34 PF04136.15 ORF30117 - 0.044 13.7 5.6 1.2 9.0 0.4 2.6 2 0 0 2 2 2 0 Sec34-like family CdvA PF18822.1 ORF30117 - 0.094 12.5 4.4 4.3 7.2 0.2 3.4 2 1 0 3 3 3 0 CdvA-like coiled-coil domain Noelin-1 PF12308.8 ORF30117 - 0.16 11.9 9.0 0.75 9.8 0.9 3.4 2 2 1 3 3 3 0 Neurogenesis glycoprotein Pro-NT_NN PF07421.11 ORF30117 - 0.22 11.8 3.9 0.85 9.9 0.5 2.2 2 0 0 2 2 2 0 Neurotensin/neuromedin N precursor BLOC1_2 PF10046.9 ORF30117 - 0.25 11.7 12.8 0.92 9.9 1.0 3.8 2 2 2 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMPIT PF07851.13 ORF30117 - 0.27 10.4 6.7 3.3 6.9 0.4 2.1 2 0 0 2 2 2 0 TMPIT-like protein ATP-synt_D PF01813.17 ORF30117 - 0.42 10.4 5.2 0.33 10.8 0.2 2.5 2 1 0 2 2 2 0 ATP synthase subunit D DUF2497 PF10691.9 ORF30117 - 0.45 11.0 0.1 0.45 11.0 0.1 3.5 2 2 2 4 4 4 0 Protein of unknown function (DUF2497) Acyl-CoA_dh_C PF12806.7 ORF30117 - 0.73 10.0 8.8 0.27 11.4 0.5 3.2 2 1 0 2 2 2 0 Acetyl-CoA dehydrogenase C-terminal like SKA2 PF16740.5 ORF30117 - 1.2 8.9 8.7 0.58 10.0 1.1 2.7 2 1 0 2 2 2 0 Spindle and kinetochore-associated protein 2 DUF1993 PF09351.10 ORF30117 - 1.4 9.1 9.4 6.5 6.9 2.3 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF1993) Syntaxin_2 PF14523.6 ORF30117 - 1.7 9.0 14.4 1.1 9.7 4.0 3.3 1 1 1 2 2 2 0 Syntaxin-like protein ZapB PF06005.12 ORF30117 - 1.9 9.0 5.1 4.5 7.8 0.2 2.9 3 0 0 3 3 3 0 Cell division protein ZapB CLZ PF16526.5 ORF30117 - 3 8.3 6.0 6.6 7.2 0.8 2.8 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF3461 PF11944.8 ORF30117 - 4.2 7.5 5.7 9.1 6.4 0.6 3.1 3 1 1 4 4 3 0 Protein of unknown function (DUF3461) DUF1664 PF07889.12 ORF30117 - 5 7.2 16.6 5.6 7.0 0.6 3.3 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) CENP-H PF05837.12 ORF30117 - 7.4 7.0 14.2 2.3 8.6 1.4 2.9 2 1 1 3 3 3 0 Centromere protein H (CENP-H) DUF3450 PF11932.8 ORF30117 - 8.4 5.6 18.7 0.65 9.2 4.8 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) HisKA_3 PF07730.13 ORF30117 - 9.1 6.9 11.3 9.6 6.8 0.2 3.8 2 2 2 4 4 4 0 Histidine kinase Helicase_C PF00271.31 ORF29564 - 9.3e-29 100.0 0.0 1.3e-28 99.5 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UTP25 PF06862.12 ORF29564 - 0.03 13.1 0.0 0.038 12.8 0.0 1.1 1 0 0 1 1 1 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 DNA_pol3_chi PF04364.13 ORF29564 - 0.14 12.3 0.1 0.14 12.3 0.1 1.8 2 0 0 2 2 2 0 DNA polymerase III chi subunit, HolC cobW PF02492.19 ORF29564 - 0.17 11.5 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain EF-hand_7 PF13499.6 ORF24884 - 1.2e-13 51.3 1.5 1e-08 35.5 0.2 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF24884 - 4.4e-12 44.6 3.8 0.0001 21.6 0.5 4.1 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF24884 - 9.8e-10 37.6 4.2 6.9e-05 22.5 0.1 4.4 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF24884 - 9.9e-05 22.1 2.3 0.073 12.9 0.5 2.9 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF24884 - 0.0047 16.4 0.7 0.0047 16.4 0.7 3.1 4 0 0 4 4 4 1 EF hand EF-hand_4 PF12763.7 ORF24884 - 0.019 14.9 0.2 0.71 9.9 0.0 2.8 2 2 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF24884 - 0.1 12.9 0.1 0.38 11.1 0.0 1.9 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region DUF4254 PF14063.6 ORF24884 - 0.11 12.3 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4254) KH_1 PF00013.29 ORF23907 - 2.7e-10 39.9 3.2 3.2e-08 33.3 3.0 2.2 2 0 0 2 2 2 2 KH domain DEC-1_N PF04625.13 ORF23907 - 0.014 14.5 3.9 0.016 14.2 3.9 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region KH_2 PF07650.17 ORF23907 - 0.063 13.1 0.4 0.063 13.1 0.4 1.7 2 0 0 2 2 2 0 KH domain HEAT_2 PF13646.6 ORF22989 - 1.3e-09 38.3 2.1 1.6e-06 28.4 0.2 2.5 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF22989 - 1.5e-06 27.9 0.2 0.09 13.1 0.1 4.7 5 0 0 5 5 5 2 HEAT repeat RSN1_TM PF13967.6 ORF22228 - 0.16 11.7 0.0 0.31 10.8 0.0 1.5 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport Bap31 PF05529.12 ORF22228 - 0.33 10.8 1.4 0.69 9.8 1.4 1.5 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region MoeA_C PF03454.15 ORF2131 - 6.7e-18 64.6 0.0 2.3e-17 62.9 0.0 1.9 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) Redoxin PF08534.10 ORF2131 - 0.14 11.8 0.1 0.26 11.0 0.1 1.4 1 0 0 1 1 1 0 Redoxin adh_short_C2 PF13561.6 ORF18119 - 7.3e-48 163.2 4.9 9.5e-48 162.8 4.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF18119 - 9.6e-48 162.2 5.0 1.2e-47 162.0 5.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF18119 - 3.7e-11 43.3 3.2 4.3e-10 39.8 3.2 2.1 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF18119 - 3.6e-05 23.4 1.2 6.9e-05 22.4 1.2 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF18119 - 0.0016 17.5 0.4 0.0023 17.0 0.4 1.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF18119 - 0.0061 16.0 0.3 0.018 14.5 0.1 1.8 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Sacchrp_dh_NADP PF03435.18 ORF18119 - 0.0085 16.3 0.6 0.015 15.5 0.6 1.4 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 ORF18119 - 0.017 15.2 0.0 0.033 14.2 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ADH_zinc_N PF00107.26 ORF18119 - 0.028 14.4 0.9 0.055 13.4 0.8 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 ORF18119 - 0.059 13.2 1.9 0.076 12.9 1.8 1.4 1 1 0 1 1 1 0 NAD(P)H-binding TrkA_N PF02254.18 ORF18119 - 0.061 13.6 0.4 0.1 12.9 0.4 1.5 1 0 0 1 1 1 0 TrkA-N domain UvrD_C PF13361.6 ORF16353 - 2.1e-12 47.1 0.0 2e-06 27.5 0.0 2.9 1 1 1 2 2 2 2 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 ORF16353 - 7.3e-07 28.9 0.0 0.0044 16.8 0.0 2.4 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_12 PF13087.6 ORF16353 - 0.00072 19.2 0.1 0.32 10.6 0.1 2.6 1 1 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF16353 - 0.011 15.5 0.0 0.38 10.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase UQ_con PF00179.26 ORF12372 - 1.5e-25 89.5 0.1 2.3e-25 88.9 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF12372 - 0.0015 18.8 0.0 0.0028 17.9 0.0 1.6 1 1 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 ORF12372 - 0.048 13.4 0.0 0.069 12.8 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family B p25-alpha PF05517.12 ORF11824 - 0.026 14.7 1.1 0.026 14.7 1.1 2.2 2 1 0 2 2 2 0 p25-alpha TPR_1 PF00515.28 ORF11621 - 0.001 18.8 2.0 1.1 9.2 0.0 3.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF11621 - 0.0022 17.9 0.8 2.9 8.2 1.0 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat DUF5097 PF17020.5 ORF11621 - 0.024 15.0 1.8 0.038 14.3 0.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5097) adh_short_C2 PF13561.6 ORF112465 - 7.3e-48 163.2 4.9 9.5e-48 162.8 4.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF112465 - 9.6e-48 162.2 5.0 1.2e-47 162.0 5.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF112465 - 3.7e-11 43.3 3.2 4.3e-10 39.8 3.2 2.1 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF112465 - 3.6e-05 23.4 1.2 6.9e-05 22.4 1.2 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF112465 - 0.0016 17.5 0.4 0.0023 17.0 0.4 1.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF112465 - 0.0061 16.0 0.3 0.018 14.5 0.1 1.8 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Sacchrp_dh_NADP PF03435.18 ORF112465 - 0.0085 16.3 0.6 0.015 15.5 0.6 1.4 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 ORF112465 - 0.017 15.2 0.0 0.033 14.2 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ADH_zinc_N PF00107.26 ORF112465 - 0.028 14.4 0.9 0.055 13.4 0.8 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 ORF112465 - 0.059 13.2 1.9 0.076 12.9 1.8 1.4 1 1 0 1 1 1 0 NAD(P)H-binding SIR2 PF02146.17 ORF111231 - 9.7e-27 94.0 0.1 2.7e-25 89.3 0.1 2.0 1 1 0 1 1 1 1 Sir2 family Glyco_transf_25 PF01755.17 ORF111049 - 4.9e-12 46.1 0.0 7.1e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) Lip_A_acyltrans PF03279.13 ORF110950 - 1.2e-102 343.0 0.0 1.4e-102 342.9 0.0 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase Phosducin PF02114.16 ORF107990 - 7.5e-11 41.5 0.5 9.7e-11 41.1 0.5 1.3 1 0 0 1 1 1 1 Phosducin PqqD PF05402.12 ORF107990 - 0.055 13.8 0.1 1.2 9.5 0.0 2.3 2 0 0 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) Herpes_BLLF1 PF05109.13 ORF107139 - 0.00057 18.0 17.4 0.00077 17.6 17.4 1.0 1 0 0 1 1 1 1 Herpes virus major outer envelope glycoprotein (BLLF1) COPIIcoated_ERV PF07970.12 ORF106747 - 4.4e-12 46.3 0.2 6.7e-12 45.7 0.2 1.3 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter ERGIC_N PF13850.6 ORF106747 - 6.9e-09 35.9 0.2 1.7e-08 34.7 0.2 1.6 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Radical_SAM PF04055.21 ORF104320 - 1.2e-31 110.3 0.1 1.7e-31 109.9 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 ORF104320 - 5.9e-18 65.5 0.1 8e-18 65.0 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 ORF104320 - 4.2e-06 26.9 0.1 8.6e-06 25.9 0.1 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF4763 PF15960.5 ORF103076 - 0.022 14.1 1.5 0.032 13.5 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) DUF218 PF02698.17 ORF101865 - 5.3e-22 78.2 0.0 6.9e-22 77.9 0.0 1.2 1 0 0 1 1 1 1 DUF218 domain DeoRC PF00455.22 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 2.2e-38 131.7 0.1 4.1e-38 130.8 0.0 1.5 2 0 0 2 2 2 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 5.6e-16 58.0 0.4 1e-15 57.2 0.4 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 2.1e-09 37.2 0.3 7.9e-09 35.3 0.1 2.0 2 0 0 2 2 2 1 HTH domain HTH_Mga PF08280.11 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 2.2e-06 27.6 0.3 5.1e-06 26.4 0.0 1.7 2 0 0 2 2 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_36 PF13730.6 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.00013 21.9 0.1 0.011 15.6 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain Put_DNA-bind_N PF06971.13 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.00027 20.9 0.1 0.00067 19.6 0.1 1.7 1 0 0 1 1 1 1 Putative DNA-binding protein N-terminus HTH_IclR PF09339.10 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.00052 19.8 0.2 0.001 18.8 0.2 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_5 PF01022.20 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.00085 19.1 0.0 0.0018 18.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family FaeA PF04703.12 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.005 17.2 0.0 0.011 16.1 0.0 1.6 1 0 0 1 1 1 1 FaeA-like protein GntR PF00392.21 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.0055 16.3 0.1 0.0097 15.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.0073 15.9 0.7 0.022 14.3 0.1 2.1 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.01 15.7 0.1 0.021 14.8 0.1 1.5 1 0 0 1 1 1 0 MarR family Mga PF05043.13 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.019 15.6 0.2 0.25 11.9 0.1 2.3 2 0 0 2 2 2 0 Mga helix-turn-helix domain HTH_AsnC-type PF13404.6 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.021 14.6 0.1 0.046 13.6 0.0 1.6 2 0 0 2 2 1 0 AsnC-type helix-turn-helix domain Rrf2 PF02082.20 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.021 15.1 0.1 0.053 13.9 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator Sigma70_r4 PF04545.16 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.025 14.1 0.1 0.056 13.0 0.1 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_15 PF12324.8 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.054 13.5 0.1 0.14 12.2 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase HTH_10 PF04967.12 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.064 13.1 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain Fe_dep_repress PF01325.19 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.067 13.4 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.08 12.8 0.1 0.17 11.8 0.1 1.5 1 0 0 1 1 1 0 MarR family HTH_Tnp_ISL3 PF13542.6 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.12 11.8 0.3 0.28 10.6 0.1 1.7 2 0 0 2 2 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_20 PF12840.7 NODE_28419_length_760_cov_2.619310_g22364_i0reverse_frame_1 - 0.12 12.5 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain PhoQ_Sensor PF08918.10 NODE_28418_length_760_cov_2.986207_g22363_i0forward_frame_1 - 2.1e-31 109.2 2.3 3.2e-31 108.6 0.4 1.9 2 0 0 2 2 2 1 PhoQ Sensor HAMP PF00672.25 NODE_28418_length_760_cov_2.986207_g22363_i0forward_frame_1 - 0.00078 19.8 0.3 0.00078 19.8 0.3 2.4 3 0 0 3 3 3 1 HAMP domain HisKA PF00512.25 NODE_28418_length_760_cov_2.986207_g22363_i0forward_frame_1 - 0.00088 19.3 1.8 0.0025 17.8 0.1 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain IL4 PF00727.18 NODE_28418_length_760_cov_2.986207_g22363_i0forward_frame_1 - 0.14 12.4 0.3 0.25 11.6 0.3 1.4 1 0 0 1 1 1 0 Interleukin 4 K-box PF01486.17 NODE_28418_length_760_cov_2.986207_g22363_i0forward_frame_1 - 0.79 9.9 9.7 8.2 6.7 6.6 2.6 2 1 0 2 2 2 0 K-box region DNA_gyraseB PF00204.25 NODE_28364_length_761_cov_87.207989_g8109_i2reverse_frame_1 - 0.12 11.8 0.1 0.2 11.2 0.1 1.2 1 0 0 1 1 1 0 DNA gyrase B Tubulin PF00091.25 NODE_28336_length_761_cov_1279.935262_g22290_i0reverse_frame_1 - 1.4e-58 198.4 0.0 1.6e-58 198.1 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 NODE_28336_length_761_cov_1279.935262_g22290_i0reverse_frame_1 - 0.015 15.0 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 NODE_28336_length_761_cov_1279.935262_g22290_i0reverse_frame_1 - 0.071 12.3 0.0 0.093 11.9 0.0 1.1 1 0 0 1 1 1 0 Tubulin like PapC_N PF13954.6 NODE_28321_length_762_cov_3.309491_g22281_i0forward_frame_1 - 2.1e-51 173.8 0.0 2.6e-51 173.4 0.0 1.1 1 0 0 1 1 1 1 PapC N-terminal domain Usher PF00577.20 NODE_28321_length_762_cov_3.309491_g22281_i0forward_frame_1 - 1.4e-21 77.0 2.0 2e-21 76.5 2.0 1.2 1 0 0 1 1 1 1 Outer membrane usher protein IMPDH PF00478.25 NODE_28271_length_763_cov_3.925824_g22235_i0reverse_frame_2 - 9e-39 133.4 0.1 1.1e-38 133.2 0.1 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 NODE_28271_length_763_cov_3.925824_g22235_i0reverse_frame_2 - 3e-16 59.6 4.8 2.1e-09 37.7 0.1 2.8 2 1 1 3 3 3 2 CBS domain NMO PF03060.15 NODE_28271_length_763_cov_3.925824_g22235_i0reverse_frame_2 - 9.4e-05 22.0 0.1 0.00012 21.5 0.1 1.3 1 1 0 1 1 1 1 Nitronate monooxygenase Sec20 PF03908.13 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 1.4e-06 28.1 1.2 1.4e-06 28.1 1.2 2.5 2 1 0 2 2 2 1 Sec20 HPIH PF13323.6 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.0014 18.5 0.0 0.003 17.4 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain with HPIH motif Synaptobrevin PF00957.21 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.0015 18.3 0.8 0.0015 18.3 0.8 3.2 2 1 2 4 4 4 1 Synaptobrevin ABC2_membrane_3 PF12698.7 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.0073 15.5 7.1 0.02 14.0 7.1 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein RasGAP_C PF03836.15 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.015 15.4 21.6 0.02 15.1 3.3 2.4 1 1 1 2 2 2 0 RasGAP C-terminus LMBR1 PF04791.16 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.027 13.4 10.6 0.033 13.1 10.6 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2802 PF10975.8 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.04 14.0 5.0 0.041 14.0 0.1 2.9 2 2 0 2 2 2 0 Protein of unknown function (DUF2802) FLILHELTA PF10306.9 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.049 14.0 0.6 0.28 11.6 0.1 2.3 2 0 0 2 2 2 0 Hypothetical protein FLILHELTA DASH_Duo1 PF08651.10 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.06 13.1 10.4 0.23 11.3 1.8 3.5 3 1 0 3 3 3 0 DASH complex subunit Duo1 DUF1786 PF08735.10 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.075 12.3 1.3 0.092 12.0 0.2 1.7 2 0 0 2 2 2 0 Putative pyruvate format-lyase activating enzyme (DUF1786) Thioredoxin_9 PF14595.6 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.36 10.6 11.4 0.25 11.1 0.1 3.2 2 1 0 3 3 3 0 Thioredoxin YtxH PF12732.7 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 0.95 10.0 11.6 2.9e+03 -1.1 11.6 4.0 1 1 0 1 1 1 0 YtxH-like protein DUF1664 PF07889.12 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 1 9.4 18.8 1.3 9.1 2.7 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DUF2935 PF11155.8 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 2.9 8.3 11.8 1.5 9.2 5.7 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF2935) Vma12 PF11712.8 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 4 7.5 6.4 13 5.8 4.3 2.4 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Fzo_mitofusin PF04799.13 NODE_28229_length_763_cov_3543.119505_g21093_i2reverse_frame_2 - 4.8 6.7 17.0 2.3 7.8 0.3 3.2 1 1 1 3 3 3 0 fzo-like conserved region LPMO_10 PF03067.15 ORF96149 - 0.0033 18.1 0.0 0.022 15.4 0.0 2.0 1 1 0 1 1 1 1 Lytic polysaccharide mono-oxygenase, cellulose-degrading Got1 PF04178.12 ORF95599 - 1.9e-28 99.1 14.1 2.7e-28 98.6 14.1 1.2 1 0 0 1 1 1 1 Got1/Sft2-like family Cytochrom_B562 PF07361.11 ORF95599 - 0.0056 17.3 0.4 0.0085 16.7 0.4 1.2 1 0 0 1 1 1 1 Cytochrome b562 DUF2207 PF09972.9 ORF95599 - 0.11 11.2 0.4 0.14 10.9 0.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PTS_IIA PF02255.16 ORF95599 - 2 8.5 3.9 4.6 7.4 3.6 1.6 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit MtN3_slv PF03083.16 ORF93038 - 1.3e-21 76.5 12.7 2.1e-14 53.3 4.0 2.2 2 0 0 2 2 2 2 Sugar efflux transporter for intercellular exchange SPX PF03105.19 ORF91418 - 0.13 12.2 9.5 0.14 12.1 9.5 1.1 1 0 0 1 1 1 0 SPX domain Presenilin PF01080.17 ORF91418 - 4.2 6.0 7.5 5.2 5.7 7.5 1.1 1 0 0 1 1 1 0 Presenilin DUF4551 PF15087.6 ORF91418 - 4.7 5.9 12.6 6.5 5.5 12.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) MAP PF03642.13 ORF90696 - 2.9 8.3 9.5 1.1 9.6 0.5 3.5 1 1 3 4 4 4 0 MAP domain RP-C_C PF11800.8 ORF90696 - 3.8 7.6 15.4 8 6.5 15.4 1.7 1 1 0 1 1 1 0 Replication protein C C-terminal region GIY-YIG PF01541.24 ORF90696 - 7.6 6.9 10.0 1.4 9.2 2.6 2.9 2 1 1 3 3 3 0 GIY-YIG catalytic domain 2-Hacid_dh_C PF02826.19 ORF89956 - 2.8e-50 170.1 0.0 3.9e-50 169.7 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF89956 - 0.0061 16.7 0.0 0.0096 16.1 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Got1 PF04178.12 ORF88336 - 1.9e-28 99.1 14.1 2.7e-28 98.6 14.1 1.2 1 0 0 1 1 1 1 Got1/Sft2-like family Cytochrom_B562 PF07361.11 ORF88336 - 0.0056 17.3 0.4 0.0085 16.7 0.4 1.2 1 0 0 1 1 1 1 Cytochrome b562 DUF2207 PF09972.9 ORF88336 - 0.11 11.2 0.4 0.14 10.9 0.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PTS_IIA PF02255.16 ORF88336 - 2 8.5 3.9 4.6 7.4 3.6 1.6 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit CS PF04969.16 ORF81104 - 6.7e-07 30.2 2.8 1e-06 29.7 1.1 2.0 2 0 0 2 2 2 1 CS domain UN_NPL4 PF11543.8 ORF81104 - 0.082 13.4 0.0 0.17 12.4 0.0 1.5 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 HTH_ABP1_N PF18107.1 ORF81104 - 0.11 12.2 0.9 0.21 11.4 0.9 1.5 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain mTERF PF02536.14 ORF80512 - 0.21 10.5 0.0 0.3 10.0 0.0 1.1 1 0 0 1 1 1 0 mTERF PDZ_6 PF17820.1 ORF79830 - 9.6e-06 25.4 0.0 2.8e-05 23.9 0.0 1.8 1 0 0 1 1 1 1 PDZ domain Glutaredoxin PF00462.24 ORF79830 - 0.00034 20.8 0.0 0.0011 19.2 0.0 1.9 2 0 0 2 2 2 1 Glutaredoxin PDZ_2 PF13180.6 ORF79830 - 0.0015 18.8 0.0 0.003 17.8 0.0 1.6 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF79830 - 0.0036 17.6 0.1 0.0076 16.6 0.1 1.5 1 0 0 1 1 1 1 PDZ domain Tricorn_PDZ PF14685.6 ORF79830 - 0.027 14.4 0.1 0.12 12.4 0.0 2.1 2 0 0 2 2 2 0 Tricorn protease PDZ domain PDZ_4 PF17816.1 ORF79830 - 0.03 14.7 0.0 0.057 13.8 0.0 1.5 1 0 0 1 1 1 0 PDZ domain LPMO_10 PF03067.15 ORF79784 - 0.0033 18.1 0.0 0.022 15.4 0.0 2.0 1 1 0 1 1 1 1 Lytic polysaccharide mono-oxygenase, cellulose-degrading DUF4201 PF13870.6 ORF75571 - 0.18 11.5 37.5 0.036 13.8 18.7 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4201) Golgin_A5 PF09787.9 ORF75571 - 7.5 5.9 37.9 14 5.0 32.5 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 Glutaredoxin2_C PF04399.13 ORF75571 - 7.6 6.4 11.0 2.5 8.0 0.5 2.7 2 1 0 2 2 2 0 Glutaredoxin 2, C terminal domain adh_short PF00106.25 ORF72750 - 8.3e-64 214.6 1.1 1e-63 214.4 1.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF72750 - 2.9e-60 203.7 0.3 3.3e-60 203.5 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF72750 - 1.3e-11 44.8 0.2 1.9e-11 44.2 0.2 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF72750 - 0.004 16.6 0.0 0.0054 16.1 0.0 1.2 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) DUF5405 PF17399.2 ORF72750 - 0.0088 16.3 0.0 0.021 15.1 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5405) SNARE_assoc PF09335.11 ORF72732 - 7.5e-19 68.4 10.1 1.7e-18 67.2 1.7 2.3 1 1 1 2 2 2 2 SNARE associated Golgi protein Josephin PF02099.17 ORF72518 - 7.2e-06 26.2 0.2 4.8e-05 23.5 0.2 2.0 1 1 0 1 1 1 1 Josephin Peptidase_C12 PF01088.21 ORF72518 - 0.06 13.1 0.0 0.076 12.8 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase, family 1 WD40 PF00400.32 ORF72138 - 6.3e-16 58.5 2.6 6.4e-07 30.0 0.3 2.4 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF72138 - 8e-05 22.9 0.0 0.021 15.1 0.0 2.5 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain LCD1 PF09798.9 ORF72138 - 0.012 14.2 12.2 0.014 13.9 12.2 1.1 1 0 0 1 1 1 0 DNA damage checkpoint protein DUF4776 PF16003.5 ORF72138 - 0.022 13.8 14.1 0.028 13.5 14.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4776) DUF4672 PF15716.5 ORF72138 - 0.041 13.5 0.4 0.041 13.5 0.4 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4672) NBP1 PF08537.10 ORF72138 - 0.073 12.5 13.7 0.097 12.1 13.7 1.1 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 V_ATPase_I PF01496.19 ORF72138 - 0.076 10.9 10.9 0.091 10.7 10.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PNMA PF14893.6 ORF72138 - 0.33 10.3 7.1 0.59 9.5 7.1 1.5 1 0 0 1 1 1 0 PNMA Prominin PF05478.11 ORF72138 - 0.72 7.7 8.2 0.63 7.9 7.1 1.4 2 0 0 2 2 2 0 Prominin DUF4404 PF14357.6 ORF72138 - 2.9 8.6 12.7 1.4 9.6 4.7 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) Spc7 PF08317.11 ORF72138 - 3.1 6.6 22.4 0.21 10.5 13.2 2.4 2 1 1 3 3 3 0 Spc7 kinetochore protein DUF3450 PF11932.8 ORF72138 - 3.3 7.0 22.9 0.058 12.7 13.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) KASH_CCD PF14662.6 ORF72138 - 3.5 7.4 19.5 4.1 7.2 18.9 1.4 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DUF4795 PF16043.5 ORF72138 - 4.3 6.9 19.3 13 5.3 19.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Allexi_40kDa PF05549.11 ORF72138 - 4.5 6.7 7.5 3.8 6.9 6.4 1.4 1 1 0 1 1 1 0 Allexivirus 40kDa protein Ribosomal_L2_C PF03947.18 ORF72092 - 3.1e-43 147.0 3.2 5.2e-43 146.2 3.2 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 ORF72092 - 6.8e-15 54.8 0.1 1.8e-14 53.4 0.1 1.7 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Chloroa_b-bind PF00504.21 ORF71975 - 2.6e-29 102.8 0.5 6.3e-29 101.6 0.2 1.7 2 0 0 2 2 2 1 Chlorophyll A-B binding protein RHINO PF15319.6 ORF71964 - 0.0087 16.1 1.6 0.012 15.7 1.6 1.1 1 0 0 1 1 1 1 RAD9, RAD1, HUS1-interacting nuclear orphan protein TpcC PF12642.7 ORF71964 - 0.099 12.4 4.2 0.17 11.6 4.3 1.3 1 1 0 1 1 1 0 Conjugative transposon protein TcpC RRM_1 PF00076.22 ORF71819 - 0.00025 20.8 0.0 0.00057 19.7 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Mit_KHE1 PF10173.9 ORF71819 - 0.1 12.7 2.3 3.7 7.6 1.1 2.1 1 1 1 2 2 2 0 Mitochondrial K+-H+ exchange-related PNP_UDP_1 PF01048.20 ORF7166 - 8.3e-41 139.8 1.5 9.3e-41 139.6 1.5 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily XPG_N PF00752.17 ORF71366 - 1.7e-17 63.7 0.8 4.1e-16 59.3 0.1 2.2 2 0 0 2 2 2 1 XPG N-terminal domain XPG_I PF00867.18 ORF71366 - 6.7e-16 58.4 0.0 4.4e-15 55.8 0.0 2.3 2 1 0 2 2 2 1 XPG I-region XPG_I_2 PF12813.7 ORF71366 - 9.2e-07 28.6 0.0 1.3e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 XPG domain containing 2-Hacid_dh_C PF02826.19 ORF70598 - 2.8e-50 170.1 0.0 3.9e-50 169.7 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF70598 - 0.0061 16.7 0.0 0.0096 16.1 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase RHINO PF15319.6 ORF6802 - 0.0087 16.1 1.6 0.012 15.7 1.6 1.1 1 0 0 1 1 1 1 RAD9, RAD1, HUS1-interacting nuclear orphan protein TpcC PF12642.7 ORF6802 - 0.099 12.4 4.2 0.17 11.6 4.3 1.3 1 1 0 1 1 1 0 Conjugative transposon protein TcpC CcmF_C PF16327.5 ORF67119 - 3.5e-84 282.8 3.4 4.1e-84 282.6 3.4 1.0 1 0 0 1 1 1 1 Cytochrome c-type biogenesis protein CcmF C-terminal ResB PF05140.14 ORF67119 - 4.5e-05 22.4 1.7 0.0086 14.9 0.0 2.6 1 1 0 3 3 3 2 ResB-like family DUF2730 PF10805.8 ORF67119 - 0.045 13.8 0.0 0.2 11.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) DUF4516 PF14990.6 ORF67119 - 0.079 12.7 0.7 0.23 11.2 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4516) Cytochrom_B_C PF00032.17 ORF67119 - 0.33 11.3 3.7 0.57 10.5 3.3 1.7 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD DUF3040 PF11239.8 ORF67119 - 2.5 8.5 9.2 10 6.5 0.4 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF3040) DUF4191 PF13829.6 ORF67119 - 5.1 6.4 6.4 3.3 7.0 4.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4191) DUF3487 PF11990.8 ORF67119 - 7.1 6.6 9.5 3.4 7.6 6.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3487) TFIIA PF03153.13 ORF63684 - 1.7 8.5 29.2 2.8 7.8 29.2 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit HalX PF08663.10 ORF63409 - 0.079 13.3 13.0 0.27 11.6 1.0 3.5 4 0 0 4 4 4 0 HalX domain DUF948 PF06103.11 ORF63409 - 0.82 10.0 2.4 1.6 9.1 0.9 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Lebercilin PF15619.6 ORF63409 - 3.3 7.3 34.5 10 5.7 1.0 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DASH_Dam1 PF08653.10 ORF63409 - 3.4 7.5 4.9 7.1 6.5 0.4 3.1 3 1 0 3 3 3 0 DASH complex subunit Dam1 ALMT PF11744.8 ORF63409 - 4.2 6.1 9.5 4.9 5.9 9.5 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter BST2 PF16716.5 ORF63409 - 7.4 7.2 21.5 2.5 8.7 3.3 3.1 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 ETF PF01012.21 ORF59763 - 1.1e-38 133.0 0.1 1.4e-38 132.6 0.1 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain TcfC PF16967.5 ORF59763 - 0.094 12.2 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 E-set like domain Got1 PF04178.12 ORF55275 - 1.9e-28 99.1 14.1 2.7e-28 98.6 14.1 1.2 1 0 0 1 1 1 1 Got1/Sft2-like family Cytochrom_B562 PF07361.11 ORF55275 - 0.0056 17.3 0.4 0.0085 16.7 0.4 1.2 1 0 0 1 1 1 1 Cytochrome b562 DUF2207 PF09972.9 ORF55275 - 0.11 11.2 0.4 0.14 10.9 0.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PTS_IIA PF02255.16 ORF55275 - 2 8.5 3.9 4.6 7.4 3.6 1.6 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit OB_NTP_bind PF07717.16 ORF5488 - 3.2e-15 56.2 0.1 6e-15 55.4 0.1 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 ORF5488 - 0.031 14.6 0.0 0.068 13.5 0.0 1.5 2 0 0 2 2 2 0 Helicase conserved C-terminal domain DUF4201 PF13870.6 ORF54007 - 0.18 11.5 37.5 0.036 13.8 18.7 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4201) Golgin_A5 PF09787.9 ORF54007 - 7.5 5.9 37.9 14 5.0 32.5 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 Glutaredoxin2_C PF04399.13 ORF54007 - 7.6 6.4 11.0 2.5 8.0 0.5 2.7 2 1 0 2 2 2 0 Glutaredoxin 2, C terminal domain LPMO_10 PF03067.15 ORF51913 - 0.0033 18.1 0.0 0.022 15.4 0.0 2.0 1 1 0 1 1 1 1 Lytic polysaccharide mono-oxygenase, cellulose-degrading Abhydrolase_1 PF00561.20 ORF47744 - 4.1e-24 85.6 0.6 2.6e-18 66.6 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF47744 - 7e-19 69.3 6.1 8.1e-19 69.1 6.1 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF47744 - 4e-11 42.6 0.1 5.4e-08 32.4 0.1 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 PGAP1 PF07819.13 ORF47744 - 3.1e-09 36.9 0.2 4.9e-05 23.2 0.0 2.3 2 1 0 3 3 3 2 PGAP1-like protein Thioesterase PF00975.20 ORF47744 - 0.00014 22.0 0.0 0.00019 21.6 0.0 1.5 1 1 0 1 1 1 1 Thioesterase domain DUF915 PF06028.11 ORF47744 - 0.00072 19.0 0.0 0.092 12.1 0.0 2.2 1 1 1 2 2 2 2 Alpha/beta hydrolase of unknown function (DUF915) DUF676 PF05057.14 ORF47744 - 0.0015 18.1 0.0 0.0029 17.1 0.0 1.5 1 1 0 1 1 1 1 Putative serine esterase (DUF676) Abhydrolase_4 PF08386.10 ORF47744 - 0.015 15.4 0.0 0.12 12.5 0.0 2.2 2 0 0 2 2 2 0 TAP-like protein Ndr PF03096.14 ORF47744 - 0.017 13.8 0.0 2.8 6.6 0.0 2.1 2 0 0 2 2 2 0 Ndr family Chlorophyllase2 PF12740.7 ORF47744 - 0.11 11.4 0.0 0.15 10.9 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme Chloroa_b-bind PF00504.21 ORF44702 - 4e-31 108.7 0.3 7.4e-31 107.8 0.1 1.5 1 1 1 2 2 2 2 Chlorophyll A-B binding protein OMPdecase PF00215.24 ORF44702 - 0.011 15.4 0.0 0.027 14.1 0.0 1.6 2 0 0 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family DNA_pol3_beta_2 PF02767.16 ORF43445 - 0.085 13.1 1.6 0.5 10.6 0.0 2.4 3 0 0 3 3 3 0 DNA polymerase III beta subunit, central domain DUF4819 PF16090.5 ORF43429 - 1.5e-05 24.9 0.0 0.14 12.3 0.0 3.0 2 1 1 3 3 3 2 Domain of unknown function (DUF4819) LBR_tudor PF09465.10 ORF43429 - 0.00083 19.1 0.2 0.035 13.9 0.1 2.9 3 0 0 3 3 3 1 Lamin-B receptor of TUDOR domain Thioredoxin_8 PF13905.6 ORF43429 - 0.00093 19.5 0.0 0.0017 18.6 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like DUF1325 PF07039.11 ORF43429 - 0.027 14.6 0.1 12 6.0 0.0 3.1 2 1 0 3 3 3 0 SGF29 tudor-like domain SF-assemblin PF06705.11 ORF4274 - 1.7e-07 30.9 27.9 2.4e-07 30.4 27.4 1.6 1 1 0 1 1 1 1 SF-assemblin/beta giardin DUF3584 PF12128.8 ORF4274 - 0.00054 17.6 13.8 0.00054 17.6 13.8 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3584) Baculo_PEP_C PF04513.12 ORF4274 - 0.0014 18.7 6.8 0.085 12.9 3.2 2.7 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus OmpH PF03938.14 ORF4274 - 0.014 15.8 25.6 0.28 11.5 1.8 3.3 1 1 1 3 3 3 0 Outer membrane protein (OmpH-like) SseC PF04888.12 ORF4274 - 0.044 13.4 9.5 0.039 13.6 2.0 2.6 1 1 2 3 3 3 0 Secretion system effector C (SseC) like family DUF1957 PF09210.11 ORF4274 - 0.14 12.6 3.2 0.34 11.3 0.7 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF1957) NPV_P10 PF05531.12 ORF4274 - 3.1 8.3 16.3 0.48 10.9 1.6 3.9 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein Mt_ATP-synt_D PF05873.12 ORF4274 - 3.4 7.5 18.8 1.9 8.3 0.8 3.8 1 1 3 4 4 4 0 ATP synthase D chain, mitochondrial (ATP5H) Exonuc_VII_L PF02601.15 ORF4274 - 6.2 6.3 18.0 3.3e+02 0.6 18.0 2.1 1 1 0 1 1 1 0 Exonuclease VII, large subunit Matrilin_ccoil PF10393.9 ORF4274 - 7.2 6.6 8.3 24 4.9 0.3 3.7 4 1 0 4 4 4 0 Trimeric coiled-coil oligomerisation domain of matrilin Csm1_N PF18504.1 ORF42649 - 0.0016 18.7 2.5 0.0048 17.2 2.5 1.9 1 0 0 1 1 1 1 Csm1 N-terminal domain KxDL PF10241.9 ORF42649 - 0.63 10.4 6.5 0.3 11.4 3.6 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein LMBR1 PF04791.16 ORF42649 - 6.9 5.5 5.6 8.8 5.1 5.6 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein Heme_oxygenase PF01126.20 ORF39223 - 8.5e-61 205.3 0.0 1e-60 205.0 0.0 1.1 1 0 0 1 1 1 1 Heme oxygenase Hydrolase_4 PF12146.8 ORF35365 - 4e-06 26.3 0.0 3e-05 23.4 0.0 1.9 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF35365 - 4.7e-05 23.2 0.1 9.6e-05 22.1 0.1 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 ORF35365 - 0.0012 17.5 0.2 0.51 9.0 0.0 2.2 1 1 1 2 2 2 2 Acetyl xylan esterase (AXE1) Abhydrolase_2 PF02230.16 ORF35365 - 0.1 12.4 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase adh_short PF00106.25 ORF33697 - 3.6e-29 101.6 0.0 4.6e-29 101.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF33697 - 5.5e-13 49.0 0.0 7.2e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF33697 - 1.1e-06 28.6 0.2 4e-06 26.9 0.2 1.8 1 1 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF33697 - 0.014 14.6 0.0 0.019 14.1 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein GP120 PF00516.18 ORF33697 - 0.015 13.9 0.0 0.021 13.5 0.0 1.1 1 0 0 1 1 1 0 Envelope glycoprotein GP120 3HCDH_N PF02737.18 ORF33697 - 0.023 14.6 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FAD_binding_9 PF08021.11 ORF33093 - 2.9e-35 121.1 0.0 1.7e-34 118.7 0.0 1.9 2 0 0 2 2 2 1 Siderophore-interacting FAD-binding domain SIP PF04954.13 ORF33093 - 3.8e-21 75.8 0.4 5.1e-21 75.4 0.4 1.2 1 0 0 1 1 1 1 Siderophore-interacting protein DUF1918 PF08940.11 ORF33093 - 0.0053 16.4 0.1 3.7 7.2 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF1918) Chloroa_b-bind PF00504.21 ORF2998 - 2.6e-29 102.8 0.5 6.3e-29 101.6 0.2 1.7 2 0 0 2 2 2 1 Chlorophyll A-B binding protein Patatin PF01734.22 ORF28680 - 9e-11 42.3 0.0 3.9e-10 40.2 0.0 2.0 1 1 0 1 1 1 1 Patatin-like phospholipase DUF4974 PF16344.5 ORF28402 - 0.012 15.6 1.1 0.12 12.4 0.2 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4974) DUF1514 PF07438.11 ORF28402 - 0.03 14.2 0.0 0.079 12.8 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1514) bZIP_1 PF00170.21 ORF28369 - 1.1e-10 41.4 11.3 1.2e-10 41.4 9.9 1.8 2 0 0 2 2 2 1 bZIP transcription factor bZIP_2 PF07716.15 ORF28369 - 8.4e-08 32.2 7.4 1.7e-07 31.2 7.4 1.5 1 0 0 1 1 1 1 Basic region leucine zipper Urocanase_N PF17391.2 ORF28369 - 0.06 13.0 0.3 3.9 7.2 0.1 2.3 2 0 0 2 2 2 0 Urocanase N-terminal domain TSC22 PF01166.18 ORF28369 - 0.094 13.0 3.3 0.099 13.0 0.4 2.4 3 0 0 3 3 3 0 TSC-22/dip/bun family TolA_bind_tri PF16331.5 ORF28369 - 0.41 10.8 4.1 0.51 10.5 2.0 2.2 2 0 0 2 2 2 0 TolA binding protein trimerisation YabA PF06156.13 ORF28369 - 2.5 8.8 13.4 0.59 10.8 2.6 3.1 3 0 0 3 3 3 0 Initiation control protein YabA Cnn_1N PF07989.11 ORF28369 - 3.7 7.8 15.8 1.2 9.4 2.7 3.3 2 1 1 3 3 3 0 Centrosomin N-terminal motif 1 CDC45 PF02724.14 ORF28369 - 8.3 4.6 16.5 8.6 4.5 16.5 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF3974 PF13120.6 ORF27544 - 0.93 9.6 4.2 0.3 11.2 0.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3974) EF-hand_6 PF13405.6 ORF27465 - 6.9e-09 34.9 0.0 0.00057 19.6 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF27465 - 1.8e-08 34.7 0.0 2.9e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF27465 - 1.9e-08 33.3 0.0 0.00022 20.5 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF27465 - 4.7e-08 32.7 0.1 6.5e-07 29.1 0.0 2.1 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF27465 - 1.6e-06 27.4 0.0 9.8e-05 21.7 0.0 2.3 2 0 0 2 2 2 1 EF hand CCD48 PF15799.5 ORF27465 - 0.024 13.0 0.0 0.031 12.6 0.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 DUF4708 PF15813.5 ORF27465 - 0.035 13.3 0.0 0.049 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4708) Homeodomain PF00046.29 ORF25036 - 6.6e-08 32.3 4.6 1.5e-07 31.1 4.6 1.6 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF25036 - 0.067 12.7 1.5 0.14 11.6 1.5 1.6 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez NAGPA PF09992.9 ORF23129 - 3.1e-16 60.1 0.1 3.8e-16 59.8 0.1 1.1 1 0 0 1 1 1 1 Phosphodiester glycosidase PseudoU_synth_2 PF00849.22 ORF22562 - 6e-18 65.4 0.0 1e-17 64.7 0.0 1.4 1 0 0 1 1 1 1 RNA pseudouridylate synthase PUB PF09409.10 ORF21599 - 4.8e-18 64.9 0.0 7.4e-18 64.3 0.0 1.3 1 0 0 1 1 1 1 PUB domain Suf PF05843.14 ORF21599 - 0.12 12.3 2.4 0.15 12.0 2.4 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) AAA_33 PF13671.6 ORF21599 - 0.63 10.2 4.2 0.6 10.3 0.2 2.1 1 1 1 2 2 2 0 AAA domain RuvA_C PF07499.13 ORF20388 - 0.15 12.5 0.0 17 6.0 0.0 3.0 3 0 0 3 3 3 0 RuvA, C-terminal domain Inhibitor_I34 PF10466.9 ORF1917 - 0.039 14.6 1.9 0.039 14.6 1.9 2.5 1 1 1 2 2 2 0 Saccharopepsin inhibitor I34 Linker_histone PF00538.19 ORF1917 - 0.07 13.5 5.1 0.32 11.4 2.0 2.6 2 0 0 2 2 2 0 linker histone H1 and H5 family DUF3899 PF13038.6 ORF17964 - 0.14 12.7 0.0 0.14 12.7 0.0 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF3899) DUF2207 PF09972.9 ORF17964 - 0.15 10.7 6.4 0.028 13.2 2.4 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF3487 PF11990.8 ORF17964 - 2.1 8.2 5.7 1 9.3 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) RNA_pol_L PF01193.24 ORF17489 - 0.098 12.1 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb3/Rpb11 dimerisation domain Clathrin_lg_ch PF01086.17 ORF111313 - 6.5e-06 26.4 16.1 6.5e-06 26.4 16.1 1.6 2 0 0 2 2 2 1 Clathrin light chain MRP-S27 PF10037.9 ORF111313 - 0.015 14.2 25.4 0.0075 15.2 23.6 1.4 1 1 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 S-AdoMet_synt_M PF02772.16 ORF111313 - 0.7 10.2 5.4 1.5 9.1 5.4 1.6 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, central domain FlgM PF04316.13 ORF111313 - 2.7 8.4 9.6 2.4 8.6 2.2 2.7 1 1 1 2 2 2 0 Anti-sigma-28 factor, FlgM LptF_LptG PF03739.14 ORF111313 - 4.2 6.1 5.8 4.8 5.9 5.8 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG His_Phos_1 PF00300.22 ORF111165 - 7e-37 127.0 0.0 1.7e-28 99.7 0.0 2.0 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) Borrelia_P83 PF05262.11 ORF110670 - 0.29 9.6 12.6 0.39 9.2 12.6 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein RRP36 PF06102.12 ORF110670 - 0.8 9.7 12.7 0.46 10.4 10.9 1.4 2 0 0 2 2 2 0 rRNA biogenesis protein RRP36 LPMO_10 PF03067.15 ORF10879 - 0.0033 18.1 0.0 0.022 15.4 0.0 2.0 1 1 0 1 1 1 1 Lytic polysaccharide mono-oxygenase, cellulose-degrading Kelch_6 PF13964.6 ORF107693 - 0.00093 19.4 0.5 0.86 10.0 0.1 3.3 3 0 0 3 3 3 1 Kelch motif Kelch_5 PF13854.6 ORF107693 - 0.0046 16.9 3.4 6.8 6.8 0.2 3.3 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 ORF107693 - 0.017 15.4 0.0 1.4 9.3 0.0 2.9 3 0 0 3 3 3 0 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF107693 - 0.022 14.3 0.3 16 5.2 0.0 3.1 3 0 0 3 3 3 0 Kelch motif Kelch_2 PF07646.15 ORF107693 - 0.077 13.0 0.1 22 5.2 0.1 2.9 3 0 0 3 3 3 0 Kelch motif EamA PF00892.20 ORF106573 - 1.6e-24 86.6 21.3 4.5e-13 49.6 13.9 2.1 2 0 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 ORF106573 - 0.009 16.0 0.8 0.02 14.9 0.1 1.9 2 0 0 2 2 2 1 Putative transmembrane family 234 FA_desaturase PF00487.24 ORF106573 - 0.13 12.1 2.6 0.24 11.2 2.6 1.5 1 0 0 1 1 1 0 Fatty acid desaturase I_LWEQ PF01608.17 ORF106573 - 0.16 12.2 0.1 0.25 11.6 0.1 1.2 1 0 0 1 1 1 0 I/LWEQ domain GntR PF00392.21 ORF101915 - 7.1e-26 89.6 0.4 1.6e-25 88.5 0.4 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 ORF101915 - 1.3e-17 64.4 11.1 2.5e-17 63.5 11.1 1.5 1 0 0 1 1 1 1 FCD domain MarR PF01047.22 ORF101915 - 0.00017 21.4 0.2 0.00097 19.0 0.0 2.3 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 ORF101915 - 0.00042 20.2 0.3 0.0016 18.3 0.1 2.1 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 ORF101915 - 0.0024 17.4 0.0 0.0066 16.0 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PaaX PF07848.12 ORF101915 - 0.0024 18.0 0.1 0.0057 16.8 0.1 1.6 1 0 0 1 1 1 1 PaaX-like protein HTH_DeoR PF08220.12 ORF101915 - 0.0027 17.4 0.0 0.0067 16.2 0.0 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 ORF101915 - 0.0031 17.4 0.0 0.0084 16.0 0.0 1.7 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 ORF101915 - 0.0039 17.0 0.3 0.022 14.7 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.6 ORF101915 - 0.012 15.7 1.6 0.02 15.0 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 ORF101915 - 0.018 15.2 0.0 0.032 14.4 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_29 PF13551.6 ORF101915 - 0.042 13.9 1.0 0.12 12.4 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn helix Rrf2 PF02082.20 ORF101915 - 0.085 13.2 0.2 0.21 11.9 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator HTH_10 PF04967.12 ORF101915 - 0.088 12.6 0.0 0.23 11.3 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain HTH_41 PF14502.6 ORF101915 - 0.14 11.9 0.0 0.3 10.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HATPase_c_2 PF13581.6 ORF101915 - 0.15 12.0 0.3 0.22 11.5 0.3 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain AAA PF00004.29 ORF101600 - 2.7e-27 95.8 0.0 5.7e-27 94.7 0.0 1.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF101600 - 1.9e-10 40.4 1.3 9.1e-10 38.2 1.3 2.0 1 1 0 1 1 1 1 AAA+ lid domain Vps4_C PF09336.10 ORF101600 - 4.6e-07 29.7 0.1 1e-06 28.6 0.1 1.6 1 0 0 1 1 1 1 Vps4 C terminal oligomerisation domain UT PF03253.14 ORF10148 - 1.1e-28 100.3 23.2 1.2e-28 100.1 23.2 1.1 1 0 0 1 1 1 1 Urea transporter DUF3402 PF11882.8 NODE_28517_length_757_cov_172.009695_g22449_i0reverse_frame_1 - 0.059 12.5 0.7 0.068 12.3 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3402) Spore_YabQ PF09578.10 NODE_28517_length_757_cov_172.009695_g22449_i0reverse_frame_1 - 0.06 13.6 2.5 0.11 12.7 2.5 1.4 1 0 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) NIF PF03031.18 NODE_28498_length_758_cov_12.708160_g22435_i0reverse_frame_1 - 3.2e-06 27.0 0.0 0.00086 19.1 0.0 2.3 2 0 0 2 2 2 2 NLI interacting factor-like phosphatase HN PF00423.19 NODE_28498_length_758_cov_12.708160_g22435_i0reverse_frame_1 - 0.11 11.2 0.1 0.11 11.2 0.1 1.7 2 0 0 2 2 2 0 Haemagglutinin-neuraminidase DUF4728 PF15860.5 NODE_28477_length_758_cov_170.627939_g22416_i0forward_frame_1 - 0.43 11.3 0.1 0.43 11.3 0.1 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4728) F-box-like PF12937.7 NODE_28452_length_759_cov_67.918508_g22396_i0reverse_frame_1 - 0.0059 16.5 0.3 0.014 15.3 0.3 1.6 1 0 0 1 1 1 1 F-box-like Homeobox_KN PF05920.11 NODE_28437_length_759_cov_160.399171_g22381_i0reverse_frame_1 - 1.5e-10 40.8 0.2 3.4e-10 39.6 0.2 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_28437_length_759_cov_160.399171_g22381_i0reverse_frame_1 - 9.7e-07 28.5 0.2 9.7e-07 28.5 0.2 2.3 3 0 0 3 3 3 1 Homeodomain Homez PF11569.8 NODE_28437_length_759_cov_160.399171_g22381_i0reverse_frame_1 - 0.0003 20.2 0.0 0.00087 18.7 0.0 1.8 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez DUF2418 PF10332.9 NODE_28435_length_759_cov_164.662983_g22379_i0reverse_frame_1 - 0.048 14.2 1.8 0.048 14.2 1.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2418) Hairy_orange PF07527.13 NODE_28419_length_760_cov_2.619310_g22364_i0forward_frame_2 - 0.057 13.6 0.1 0.12 12.6 0.1 1.7 1 0 0 1 1 1 0 Hairy Orange Suv3_C_1 PF18147.1 NODE_28418_length_760_cov_2.986207_g22363_i0reverse_frame_2 - 0.032 14.1 0.0 0.069 13.0 0.0 1.6 1 0 0 1 1 1 0 Suv3 C-terminal domain 1 DUF1554 PF07588.11 NODE_28418_length_760_cov_2.986207_g22363_i0forward_frame_3 - 0.018 14.8 0.1 0.03 14.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1554) DUF2576 PF10845.8 NODE_28364_length_761_cov_87.207989_g8109_i2reverse_frame_2 - 0.11 12.2 0.1 0.21 11.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) WYL_3 PF18488.1 NODE_28364_length_761_cov_87.207989_g8109_i2forward_frame_2 - 0.00028 21.2 0.9 0.00028 21.2 0.9 1.8 2 0 0 2 2 2 1 WYL domain DAG_kinase_N PF14513.6 NODE_28364_length_761_cov_87.207989_g8109_i2forward_frame_2 - 0.046 13.9 1.2 0.089 13.0 0.1 1.8 2 0 0 2 2 2 0 Diacylglycerol kinase N-terminus SR-25 PF10500.9 NODE_28356_length_761_cov_135.195592_g22309_i0forward_frame_3 - 0.2 11.2 7.5 0.35 10.4 7.5 1.3 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Phage_mat-A PF03863.13 NODE_28336_length_761_cov_1279.935262_g22290_i0forward_frame_3 - 0.25 10.2 0.9 0.36 9.7 0.9 1.1 1 0 0 1 1 1 0 Phage maturation protein DUF1241 PF06840.11 NODE_28325_length_762_cov_2.927098_g22285_i0reverse_frame_3 - 0.024 14.3 1.2 0.055 13.1 1.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) Synaptonemal_3 PF15191.6 NODE_28325_length_762_cov_2.927098_g22285_i0reverse_frame_3 - 0.042 13.6 0.9 0.13 12.0 0.2 2.2 2 0 0 2 2 2 0 Synaptonemal complex central element protein 3 Scaffolding_pro PF11418.8 NODE_28325_length_762_cov_2.927098_g22285_i0reverse_frame_3 - 0.16 12.6 3.1 12 6.5 0.2 2.5 2 0 0 2 2 2 0 Phi29 scaffolding protein Cas9_a PF18470.1 NODE_28325_length_762_cov_2.927098_g22285_i0reverse_frame_3 - 0.43 10.1 4.6 0.095 12.2 0.8 1.9 2 1 0 2 2 2 0 Cas9 alpha-helical lobe domain DDDD PF10161.9 NODE_28324_length_762_cov_2.938102_g22284_i0reverse_frame_3 - 0.065 13.0 1.1 0.22 11.3 0.1 2.1 2 0 0 2 2 2 0 Putative mitochondrial precursor protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks69.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks69.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks69.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks69.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HSP70 PF00012.20 ORF34584 - 1.8e-263 875.2 10.8 2.1e-263 875.0 10.8 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF34584 - 1.8e-18 66.5 0.2 5.7e-17 61.5 0.1 2.2 2 0 0 2 2 2 1 MreB/Mbl protein BcrAD_BadFG PF01869.20 ORF34584 - 3.5e-05 23.5 0.1 0.06 12.8 0.0 2.5 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family FGGY_C PF02782.16 ORF34584 - 0.033 13.9 0.0 0.11 12.2 0.0 1.9 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain CSN7a_helixI PF18392.1 ORF34584 - 6 6.8 7.0 2.2 8.2 3.1 2.1 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain DUF4116 PF13475.6 ORF66268 - 5.9e-25 86.7 0.0 7.5e-08 32.0 0.0 5.4 2 1 2 5 5 5 5 Domain of unknown function (DUF4116) KR PF08659.10 ORF66268 - 0.00046 20.2 0.0 0.0013 18.7 0.0 1.7 1 0 0 1 1 1 1 KR domain HSP70 PF00012.20 ORF82329 - 1.8e-263 875.2 10.8 2e-263 875.0 10.8 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF82329 - 1.8e-18 66.5 0.2 5.7e-17 61.5 0.1 2.2 2 0 0 2 2 2 1 MreB/Mbl protein BcrAD_BadFG PF01869.20 ORF82329 - 3.4e-05 23.5 0.1 0.059 12.8 0.0 2.5 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family FGGY_C PF02782.16 ORF82329 - 0.033 13.9 0.0 0.11 12.2 0.0 1.9 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain CSN7a_helixI PF18392.1 ORF82329 - 6 6.9 7.0 2.2 8.2 3.1 2.1 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain Peptidase_C2 PF00648.21 ORF59307 - 4.3e-56 190.1 0.2 2.7e-55 187.5 0.0 1.9 1 1 0 2 2 2 1 Calpain family cysteine protease SH3_2 PF07653.17 ORF59307 - 6.2e-06 25.8 0.1 2.4e-05 23.9 0.1 2.2 2 0 0 2 2 2 1 Variant SH3 domain SH3_9 PF14604.6 ORF59307 - 0.00019 21.2 0.0 0.00062 19.6 0.0 2.0 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF59307 - 0.00054 19.5 0.1 0.0012 18.4 0.1 1.7 1 0 0 1 1 1 1 SH3 domain TPR_7 PF13176.6 ORF56356 - 1e-10 40.8 3.3 0.16 12.0 0.1 6.2 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF56356 - 2e-07 31.2 5.7 0.61 10.4 0.0 6.8 6 1 0 7 7 7 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF56356 - 4.9e-07 29.4 12.8 0.66 10.2 0.0 7.0 7 2 1 9 9 8 2 Tetratricopeptide repeat Clathrin PF00637.20 ORF56356 - 2.7e-06 27.3 13.6 0.00018 21.4 1.6 4.9 3 1 2 5 5 5 2 Region in Clathrin and VPS TPR_1 PF00515.28 ORF56356 - 2.3e-05 24.0 16.3 0.65 9.9 0.1 6.1 6 1 1 7 7 6 4 Tetratricopeptide repeat TPR_14 PF13428.6 ORF56356 - 0.00012 22.6 1.2 5.7 8.0 0.0 5.6 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF56356 - 0.00036 20.5 14.3 3.1 8.2 0.1 7.5 7 1 1 8 8 7 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF56356 - 0.00054 20.4 8.4 4.1 8.0 2.5 5.7 4 2 0 4 4 4 1 Tetratricopeptide repeat Nic96 PF04097.14 ORF56356 - 0.00063 18.3 3.6 0.23 9.9 0.1 3.9 2 1 3 5 5 5 3 Nup93/Nic96 TPR_MalT PF17874.1 ORF56356 - 0.023 14.1 0.7 7 5.9 0.0 2.7 3 0 0 3 3 3 0 MalT-like TPR region ANAPC3 PF12895.7 ORF56356 - 0.033 14.4 6.1 15 5.9 0.0 5.5 4 2 2 6 6 6 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 ORF56356 - 0.067 13.1 10.7 1.3 9.0 0.2 4.8 6 0 0 6 6 6 0 Tetratricopeptide repeat Ribosomal_60s PF00428.19 ORF56356 - 0.16 12.6 4.2 0.41 11.3 4.2 1.7 1 0 0 1 1 1 0 60s Acidic ribosomal protein TPR_16 PF13432.6 ORF56356 - 0.2 12.4 3.8 34 5.2 0.0 3.9 4 0 0 4 4 3 0 Tetratricopeptide repeat UBZ_FAAP20 PF15750.5 ORF56356 - 1.5 8.8 5.1 0.54 10.3 1.4 2.2 2 0 0 2 2 2 0 Ubiquitin-binding zinc-finger TPR_6 PF13174.6 ORF56356 - 1.7 9.4 8.6 62 4.6 0.2 5.7 7 0 0 7 7 5 0 Tetratricopeptide repeat MIT PF04212.18 ORF56356 - 6.9 6.8 17.3 13 6.0 0.0 5.2 5 0 0 5 5 4 0 MIT (microtubule interacting and transport) domain BLOC1_2 PF10046.9 ORF98386 - 0.32 11.3 20.0 1.3 9.4 0.2 5.5 4 1 1 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4795 PF16043.5 ORF62505 - 0.00031 20.4 11.9 0.031 13.9 0.3 4.4 2 1 1 3 3 3 2 Domain of unknown function (DUF4795) Med9 PF07544.13 ORF62505 - 0.022 14.8 0.1 0.022 14.8 0.1 5.0 4 1 1 5 5 5 0 RNA polymerase II transcription mediator complex subunit 9 Baculo_PEP_C PF04513.12 ORF62505 - 0.2 11.7 9.8 72 3.4 0.0 5.8 6 0 0 6 6 6 0 Baculovirus polyhedron envelope protein, PEP, C terminus AHSP PF09236.10 ORF62505 - 0.28 11.6 1.3 1 9.8 0.2 2.6 2 0 0 2 2 1 0 Alpha-haemoglobin stabilising protein Spc29 PF17082.5 ORF62505 - 0.29 10.9 13.0 0.67 9.8 0.0 3.9 4 1 0 4 4 4 0 Spindle Pole Component 29 MtrG PF04210.13 ORF62505 - 0.76 9.7 2.7 20 5.2 0.3 3.5 4 0 0 4 4 4 0 Tetrahydromethanopterin S-methyltransferase, subunit G DUF2730 PF10805.8 ORF62505 - 1.1 9.4 15.9 2.9 8.0 0.2 5.3 5 1 1 6 6 6 0 Protein of unknown function (DUF2730) DUF5398 PF17376.2 ORF62505 - 1.6 9.4 7.8 0.22 12.2 1.3 2.9 3 0 0 3 3 3 0 Family of unknown function (DUF5398) GlutR_dimer PF00745.20 ORF62505 - 1.8 9.1 8.9 6.9 7.2 0.2 3.5 3 0 0 3 3 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain DUF948 PF06103.11 ORF62505 - 2.8 8.3 13.6 34 4.8 0.0 5.8 5 2 1 6 6 6 0 Bacterial protein of unknown function (DUF948) Lectin_N PF03954.14 ORF62505 - 3 7.6 7.0 9.9 5.9 1.5 3.6 3 0 0 3 3 3 0 Hepatic lectin, N-terminal domain Fib_alpha PF08702.10 ORF62505 - 3.9 7.6 16.5 23 5.2 3.4 4.3 5 0 0 5 5 5 0 Fibrinogen alpha/beta chain family Cytochrom_B558a PF05038.13 ORF62505 - 6.8 6.2 6.7 5.6 6.5 0.1 2.3 2 0 0 2 2 2 0 Cytochrome Cytochrome b558 alpha-subunit DUF4665 PF15679.5 ORF62505 - 7.3 7.3 5.8 15 6.3 0.2 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4665) AAA_2 PF07724.14 ORF83030 - 7.4e-54 182.4 1.2 6.4e-52 176.1 0.0 3.0 3 0 0 3 3 3 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF83030 - 3.6e-32 110.4 3.6 3.6e-32 110.4 3.6 2.0 1 1 1 2 2 2 1 AAA lid domain AAA PF00004.29 ORF83030 - 4.2e-24 85.5 0.9 1.5e-13 51.3 0.0 3.4 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 ORF83030 - 1.8e-20 72.8 0.2 2.3e-19 69.2 0.0 2.8 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 ORF83030 - 3.9e-16 59.3 0.0 3.7e-10 39.9 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF83030 - 9.9e-09 35.8 4.5 0.00015 22.2 0.3 4.1 3 2 0 4 4 3 2 AAA ATPase domain IstB_IS21 PF01695.17 ORF83030 - 3.1e-08 33.5 0.0 0.0028 17.4 0.0 2.6 2 0 0 2 2 2 2 IstB-like ATP binding protein TniB PF05621.11 ORF83030 - 4.7e-08 32.7 0.0 0.00074 19.0 0.0 4.4 3 1 0 3 3 3 1 Bacterial TniB protein Sigma54_activat PF00158.26 ORF83030 - 1e-07 31.8 0.0 0.00025 20.8 0.0 2.6 2 1 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 ORF83030 - 4e-07 30.4 10.9 0.015 15.6 0.2 5.5 5 2 0 5 5 4 2 AAA domain AAA_18 PF13238.6 ORF83030 - 8.8e-07 29.5 0.6 0.02 15.4 0.0 3.6 4 0 0 4 4 3 2 AAA domain AAA_14 PF13173.6 ORF83030 - 1.8e-06 28.0 1.0 0.048 13.7 0.0 3.3 4 1 0 4 4 3 2 AAA domain UVR PF02151.19 ORF83030 - 2.6e-06 27.0 3.1 9.9e-06 25.1 3.1 2.1 1 0 0 1 1 1 1 UvrB/uvrC motif ATPase_2 PF01637.18 ORF83030 - 3.9e-06 27.0 0.9 0.17 11.8 0.0 4.2 4 0 0 4 4 3 1 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 ORF83030 - 4.9e-06 26.9 0.1 0.062 13.7 0.0 3.5 3 1 0 3 3 2 2 RNA helicase AAA_33 PF13671.6 ORF83030 - 3.3e-05 24.1 0.0 0.16 12.1 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 ORF83030 - 0.00012 21.7 0.0 0.38 10.2 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF83030 - 0.00015 21.7 0.0 0.52 10.2 0.0 3.3 2 1 1 3 3 3 1 RsgA GTPase Zeta_toxin PF06414.12 ORF83030 - 0.00018 20.9 0.0 0.14 11.4 0.0 2.9 2 0 0 2 2 2 1 Zeta toxin AAA_24 PF13479.6 ORF83030 - 0.00022 21.0 0.0 1.2 8.8 0.0 3.4 2 1 0 2 2 2 2 AAA domain ResIII PF04851.15 ORF83030 - 0.00024 21.2 1.6 0.23 11.4 0.0 4.2 4 0 0 4 4 4 1 Type III restriction enzyme, res subunit RuvB_N PF05496.12 ORF83030 - 0.00029 20.6 2.4 1.8 8.3 0.0 3.7 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain Roc PF08477.13 ORF83030 - 0.00041 20.6 0.0 1.4 9.2 0.0 2.9 3 0 0 3 3 2 2 Ras of Complex, Roc, domain of DAPkinase TsaE PF02367.17 ORF83030 - 0.00043 20.3 0.0 1.3 9.0 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 ORF83030 - 0.00044 20.2 0.1 0.071 13.0 0.2 3.1 2 1 0 2 2 2 1 NACHT domain Mg_chelatase PF01078.21 ORF83030 - 0.00058 19.3 0.5 0.68 9.3 0.0 3.3 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 ORF83030 - 0.0015 18.8 0.7 1.7 8.8 0.0 3.4 4 0 0 4 4 3 1 AAA domain DUF815 PF05673.13 ORF83030 - 0.0016 17.7 0.1 1.2 8.2 0.0 2.8 2 1 0 2 2 2 1 Protein of unknown function (DUF815) AAA_25 PF13481.6 ORF83030 - 0.003 17.2 0.0 2.2 7.8 0.0 2.8 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 ORF83030 - 0.0053 17.3 1.7 1.1 9.7 0.0 3.2 2 1 0 2 2 2 1 ABC transporter Bac_DnaA PF00308.18 ORF83030 - 0.0077 16.1 0.2 1.5 8.6 0.0 3.0 2 1 0 2 2 2 1 Bacterial dnaA protein TFIIB_C_1 PF18542.1 ORF83030 - 0.013 15.5 0.1 0.084 12.9 0.0 2.4 1 1 1 2 2 2 0 Transcription factor IIB C-terminal module 1 AAA_3 PF07726.11 ORF83030 - 0.019 14.8 2.0 2.9 7.7 0.0 3.3 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 ORF83030 - 0.045 13.7 3.4 17 5.3 0.0 3.7 4 0 0 4 4 3 0 NTPase SRP54 PF00448.22 ORF83030 - 0.058 13.0 0.0 1.5 8.4 0.0 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain PduV-EutP PF10662.9 ORF83030 - 0.065 13.0 0.0 1.7 8.4 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation LEF-4 PF05098.12 ORF83030 - 0.068 12.0 0.3 0.11 11.3 0.3 1.2 1 0 0 1 1 1 0 Late expression factor 4 (LEF-4) AAA_23 PF13476.6 ORF83030 - 0.083 13.4 0.1 0.083 13.4 0.1 3.5 2 2 0 2 2 2 0 AAA domain Torsin PF06309.11 ORF83030 - 0.1 12.7 0.0 0.69 10.0 0.0 2.2 2 0 0 2 2 2 0 Torsin AAA_17 PF13207.6 ORF83030 - 0.15 12.5 3.6 17 5.8 0.0 3.5 3 1 0 3 3 2 0 AAA domain Focal_AT PF03623.13 ORF83030 - 0.2 11.7 1.8 0.63 10.0 1.8 1.8 1 0 0 1 1 1 0 Focal adhesion targeting region KTI12 PF08433.10 ORF83030 - 0.26 10.7 2.6 2.3 7.6 0.0 3.2 3 1 0 3 3 3 0 Chromatin associated protein KTI12 AAA_19 PF13245.6 ORF83030 - 0.49 10.7 3.1 2.9 8.2 0.4 3.2 2 2 0 2 2 2 0 AAA domain HAUS6_N PF14661.6 ORF83030 - 1.1 8.8 4.7 2 8.0 4.7 1.4 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus AAA_2 PF07724.14 ORF19753 - 7.4e-54 182.4 1.2 6.4e-52 176.1 0.0 3.0 3 0 0 3 3 3 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF19753 - 3.6e-32 110.4 3.6 3.6e-32 110.4 3.6 2.0 1 1 1 2 2 2 1 AAA lid domain AAA PF00004.29 ORF19753 - 4.2e-24 85.5 0.9 1.5e-13 51.3 0.0 3.4 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 ORF19753 - 1.8e-20 72.8 0.2 2.3e-19 69.2 0.0 2.8 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 ORF19753 - 3.9e-16 59.3 0.0 3.7e-10 39.9 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF19753 - 9.9e-09 35.8 4.5 0.00015 22.2 0.3 4.1 3 2 0 4 4 3 2 AAA ATPase domain IstB_IS21 PF01695.17 ORF19753 - 3.1e-08 33.5 0.0 0.0028 17.4 0.0 2.6 2 0 0 2 2 2 2 IstB-like ATP binding protein TniB PF05621.11 ORF19753 - 4.7e-08 32.7 0.0 0.00074 19.0 0.0 4.4 3 1 0 3 3 3 1 Bacterial TniB protein Sigma54_activat PF00158.26 ORF19753 - 1e-07 31.8 0.0 0.00025 20.8 0.0 2.6 2 1 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 ORF19753 - 4e-07 30.4 10.9 0.015 15.6 0.2 5.5 5 2 0 5 5 4 2 AAA domain AAA_18 PF13238.6 ORF19753 - 8.8e-07 29.5 0.6 0.02 15.4 0.0 3.6 4 0 0 4 4 3 2 AAA domain AAA_14 PF13173.6 ORF19753 - 1.8e-06 28.0 1.0 0.048 13.7 0.0 3.3 4 1 0 4 4 3 2 AAA domain UVR PF02151.19 ORF19753 - 2.6e-06 27.0 3.1 9.9e-06 25.1 3.1 2.1 1 0 0 1 1 1 1 UvrB/uvrC motif ATPase_2 PF01637.18 ORF19753 - 3.9e-06 27.0 0.9 0.17 11.8 0.0 4.2 4 0 0 4 4 3 1 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 ORF19753 - 4.9e-06 26.9 0.1 0.062 13.7 0.0 3.5 3 1 0 3 3 2 2 RNA helicase AAA_33 PF13671.6 ORF19753 - 3.3e-05 24.1 0.0 0.16 12.1 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 ORF19753 - 0.00012 21.7 0.0 0.38 10.2 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF19753 - 0.00015 21.7 0.0 0.52 10.2 0.0 3.3 2 1 1 3 3 3 1 RsgA GTPase Zeta_toxin PF06414.12 ORF19753 - 0.00018 20.9 0.0 0.14 11.4 0.0 2.9 2 0 0 2 2 2 1 Zeta toxin AAA_24 PF13479.6 ORF19753 - 0.00022 21.0 0.0 1.2 8.8 0.0 3.4 2 1 0 2 2 2 2 AAA domain ResIII PF04851.15 ORF19753 - 0.00024 21.2 1.6 0.23 11.4 0.0 4.2 4 0 0 4 4 4 1 Type III restriction enzyme, res subunit RuvB_N PF05496.12 ORF19753 - 0.00029 20.6 2.4 1.8 8.3 0.0 3.7 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain Roc PF08477.13 ORF19753 - 0.00041 20.6 0.0 1.4 9.2 0.0 2.9 3 0 0 3 3 2 2 Ras of Complex, Roc, domain of DAPkinase TsaE PF02367.17 ORF19753 - 0.00043 20.3 0.0 1.3 9.0 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 ORF19753 - 0.00044 20.2 0.1 0.071 13.0 0.2 3.1 2 1 0 2 2 2 1 NACHT domain Mg_chelatase PF01078.21 ORF19753 - 0.00058 19.3 0.5 0.68 9.3 0.0 3.3 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 ORF19753 - 0.0015 18.8 0.7 1.7 8.8 0.0 3.4 4 0 0 4 4 3 1 AAA domain DUF815 PF05673.13 ORF19753 - 0.0016 17.7 0.1 1.2 8.2 0.0 2.8 2 1 0 2 2 2 1 Protein of unknown function (DUF815) AAA_25 PF13481.6 ORF19753 - 0.003 17.2 0.0 2.2 7.8 0.0 2.8 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 ORF19753 - 0.0053 17.3 1.7 1.1 9.7 0.0 3.2 2 1 0 2 2 2 1 ABC transporter Bac_DnaA PF00308.18 ORF19753 - 0.0077 16.1 0.2 1.5 8.6 0.0 3.0 2 1 0 2 2 2 1 Bacterial dnaA protein TFIIB_C_1 PF18542.1 ORF19753 - 0.013 15.5 0.1 0.084 12.9 0.0 2.4 1 1 1 2 2 2 0 Transcription factor IIB C-terminal module 1 AAA_3 PF07726.11 ORF19753 - 0.019 14.8 2.0 2.9 7.7 0.0 3.3 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 ORF19753 - 0.045 13.7 3.4 17 5.3 0.0 3.7 4 0 0 4 4 3 0 NTPase SRP54 PF00448.22 ORF19753 - 0.058 13.0 0.0 1.5 8.4 0.0 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain PduV-EutP PF10662.9 ORF19753 - 0.065 13.0 0.0 1.7 8.4 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation LEF-4 PF05098.12 ORF19753 - 0.068 12.0 0.3 0.11 11.3 0.3 1.2 1 0 0 1 1 1 0 Late expression factor 4 (LEF-4) AAA_23 PF13476.6 ORF19753 - 0.083 13.4 0.1 0.083 13.4 0.1 3.5 2 2 0 2 2 2 0 AAA domain Torsin PF06309.11 ORF19753 - 0.1 12.7 0.0 0.69 10.0 0.0 2.2 2 0 0 2 2 2 0 Torsin AAA_17 PF13207.6 ORF19753 - 0.15 12.5 3.6 17 5.8 0.0 3.5 3 1 0 3 3 2 0 AAA domain Focal_AT PF03623.13 ORF19753 - 0.2 11.7 1.8 0.63 10.0 1.8 1.8 1 0 0 1 1 1 0 Focal adhesion targeting region KTI12 PF08433.10 ORF19753 - 0.26 10.7 2.6 2.3 7.6 0.0 3.2 3 1 0 3 3 3 0 Chromatin associated protein KTI12 AAA_19 PF13245.6 ORF19753 - 0.49 10.7 3.1 2.9 8.2 0.4 3.2 2 2 0 2 2 2 0 AAA domain HAUS6_N PF14661.6 ORF19753 - 1.1 8.8 4.7 2 8.0 4.7 1.4 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus ADK PF00406.22 ORF112207 - 7.5e-16 58.6 0.0 2.4e-14 53.7 0.0 2.2 2 0 0 2 2 2 1 Adenylate kinase AAA_17 PF13207.6 ORF112207 - 8.2e-10 39.2 0.1 3.7e-09 37.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF112207 - 3.7e-05 24.3 0.0 0.00027 21.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain Hydin_ADK PF17213.3 ORF112207 - 0.0001 22.6 0.3 0.0001 22.6 0.3 3.3 4 0 0 4 4 4 1 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 ORF112207 - 0.0071 16.5 0.0 0.027 14.6 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 ORF112207 - 0.031 14.5 2.4 0.035 14.4 0.2 2.2 2 0 0 2 2 2 0 AAA domain EFG_IV PF03764.18 ORF94610 - 2.8e-24 85.2 0.0 2.5e-23 82.2 0.0 2.5 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF94610 - 1.7e-15 56.8 0.0 3.8e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF94610 - 5.5e-15 55.5 0.1 1.2e-14 54.4 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF94610 - 8.9e-13 48.1 0.0 2.2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_IV PF03764.18 ORF88151 - 2.8e-24 85.2 0.0 2.5e-23 82.2 0.0 2.5 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF88151 - 1.7e-15 56.8 0.0 3.8e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF88151 - 5.5e-15 55.5 0.1 1.2e-14 54.4 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF88151 - 8.9e-13 48.1 0.0 2.2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_IV PF03764.18 ORF39083 - 2.8e-24 85.2 0.0 2.5e-23 82.2 0.0 2.5 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF39083 - 1.7e-15 56.8 0.0 3.8e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF39083 - 5.5e-15 55.5 0.1 1.2e-14 54.4 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF39083 - 8.9e-13 48.1 0.0 2.2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_IV PF03764.18 ORF101367 - 2.8e-24 85.2 0.0 2.5e-23 82.2 0.0 2.5 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF101367 - 1.7e-15 56.8 0.0 3.8e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF101367 - 5.5e-15 55.5 0.1 1.2e-14 54.4 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF101367 - 8.9e-13 48.1 0.0 2.2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II Baculo_PEP_C PF04513.12 NODE_2808_length_2026_cov_119.079859_g1938_i0reverse_frame_1 - 1.9 8.5 35.6 0.028 14.5 2.3 5.7 4 1 0 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus Acyl_transf_3 PF01757.22 ORF85055 - 1.3e-16 60.7 43.5 1.3e-16 60.7 43.5 1.5 2 0 0 2 2 2 1 Acyltransferase family Amnionless PF14828.6 ORF85055 - 0.027 13.3 0.1 0.19 10.5 0.0 2.0 2 0 0 2 2 2 0 Amnionless DUF148 PF02520.17 ORF52268 - 0.038 14.1 0.1 0.038 14.1 0.1 3.0 4 1 0 4 4 4 0 Domain of unknown function DUF148 F-protein PF00469.20 ORF52268 - 0.064 12.8 0.3 0.19 11.3 0.3 1.8 2 0 0 2 2 2 0 Negative factor, (F-Protein) or Nef ACOX PF01756.19 ORF10200 - 1.3e-17 64.0 0.0 2.1e-17 63.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_dh_M PF02770.19 ORF10200 - 1.1e-10 41.6 0.0 2e-10 40.7 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 ORF10200 - 0.00092 19.4 0.0 0.0045 17.2 0.0 2.0 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain TPR_12 PF13424.6 ORF67018 - 1.3e-14 54.3 38.7 0.0041 17.4 0.4 6.5 6 1 0 7 7 7 5 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF67018 - 8.8e-13 48.3 29.6 1.1e-05 25.0 0.7 3.3 2 1 1 3 3 3 3 MalT-like TPR region PP-binding PF00550.25 ORF67018 - 3.3e-11 43.4 0.2 9.6e-11 41.9 0.1 2.0 2 0 0 2 2 2 1 Phosphopantetheine attachment site SNAP PF14938.6 ORF67018 - 0.026 14.0 24.8 0.15 11.5 2.1 3.9 2 1 1 4 4 4 0 Soluble NSF attachment protein, SNAP TPR_2 PF07719.17 ORF67018 - 1.2 9.4 42.2 1.4 9.3 0.1 10.2 12 0 0 12 12 12 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF67018 - 5.4 7.0 35.3 0.89 9.5 0.1 8.8 10 0 0 10 10 10 0 Tetratricopeptide repeat RPN7 PF10602.9 ORF67018 - 7.8 6.2 9.3 17 5.0 2.2 3.6 2 1 1 3 3 3 0 26S proteasome subunit RPN7 TSC22 PF01166.18 ORF98617 - 0.0055 17.0 0.3 0.0055 17.0 0.3 12.0 11 3 4 15 15 15 3 TSC-22/dip/bun family HIP1_clath_bdg PF16515.5 ORF98617 - 0.018 15.6 7.1 0.018 15.6 7.1 8.9 2 1 8 11 11 11 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Malate_DH PF12434.8 ORF98617 - 0.22 11.6 1.8 17 5.5 0.1 3.7 2 0 0 2 2 2 0 Malate dehydrogenase enzyme ApoO PF09769.9 ORF98617 - 1.1 9.3 7.6 1.4 8.9 1.2 3.7 2 1 1 3 3 3 0 Apolipoprotein O T2SSF PF00482.23 ORF98617 - 5.2 7.0 5.6 6.5 6.7 0.1 3.5 4 0 0 4 4 4 0 Type II secretion system (T2SS), protein F Kinesin PF00225.23 ORF44196 - 1.5e-83 280.5 1.1 1.5e-83 280.5 1.1 3.3 3 1 0 3 3 3 1 Kinesin motor domain Protocadherin PF08374.11 ORF44196 - 0.012 15.6 0.3 0.012 15.6 0.3 3.8 3 2 0 4 4 4 0 Protocadherin Kinesin_assoc PF16183.5 ORF44196 - 1.5 8.9 28.8 68 3.5 24.1 3.1 2 1 0 2 2 2 0 Kinesin-associated DUF4692 PF15763.5 ORF74726 - 0.0063 17.0 0.1 0.024 15.1 0.1 2.0 1 0 0 1 1 1 1 Regulator of human erythroid cell expansion (RHEX) Orbi_VP2 PF00898.17 ORF74726 - 0.1 10.4 0.1 0.14 9.9 0.1 1.1 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP2 HATPase_c PF02518.26 ORF67725 - 3.3e-27 95.2 0.6 1.2e-26 93.4 0.0 2.3 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 ORF67725 - 3.5e-25 88.3 0.2 1.1e-24 86.7 0.0 2.0 2 0 0 2 2 2 1 Response regulator receiver domain HATPase_c_3 PF13589.6 ORF67725 - 2.1e-05 24.4 0.0 4.9e-05 23.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KdpC PF02669.15 ORF67725 - 0.0026 17.6 0.5 0.017 15.0 0.0 2.1 2 0 0 2 2 2 1 K+-transporting ATPase, c chain HATPase_c_5 PF14501.6 ORF67725 - 0.02 14.8 0.0 0.065 13.1 0.0 1.8 1 0 0 1 1 1 0 GHKL domain DUF4213 PF13938.6 ORF66685 - 0.094 13.0 0.1 0.34 11.2 0.1 2.0 1 0 0 1 1 1 0 Putative heavy-metal chelation Proton_antipo_M PF00361.20 ORF85414 - 7.3e-54 182.9 28.3 7.3e-54 182.9 28.3 2.9 1 1 1 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 ORF85414 - 9.5e-05 22.4 3.2 9.5e-05 22.4 3.2 3.2 3 1 0 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF4225 PF13988.6 ORF85414 - 0.22 11.1 1.7 0.25 10.9 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4225) A_deaminase PF00962.22 ORF93574 - 4.8e-98 328.5 0.0 6.3e-98 328.1 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase PsaA_PsaB PF00223.19 ORF5864 - 6.9e-127 424.5 39.5 9.9e-122 407.5 39.5 3.8 1 1 0 1 1 1 1 Photosystem I psaA/psaB protein HTH_9 PF08221.11 ORF5864 - 0.012 15.7 1.2 0.44 10.7 1.0 2.6 1 1 1 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Ank_2 PF12796.7 ORF47322 - 3e-37 127.1 0.0 4.3e-15 56.1 0.0 3.7 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF47322 - 6.2e-17 61.4 0.2 9.7e-07 29.0 0.0 5.0 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF47322 - 9.6e-15 53.2 0.0 0.0092 16.4 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank PF00023.30 ORF47322 - 3e-14 52.7 0.0 0.096 13.2 0.0 5.8 5 0 0 5 5 5 4 Ankyrin repeat Ank_4 PF13637.6 ORF47322 - 2.3e-13 50.3 0.0 3.2e-05 24.4 0.0 4.9 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Anoctamin PF04547.12 ORF62499 - 0.006 15.5 0.0 0.013 14.4 0.0 1.6 1 1 0 1 1 1 1 Calcium-activated chloride channel zf-B_box PF00643.24 ORF62499 - 0.015 15.4 5.0 0.015 15.4 5.0 2.0 2 0 0 2 2 2 0 B-box zinc finger Syndecan PF01034.20 ORF62499 - 2.8 7.9 6.8 0.97 9.4 0.3 3.2 3 0 0 3 3 3 0 Syndecan domain Glyco_hydro_31 PF01055.26 ORF76340 - 6.7e-96 322.1 1.4 8.2e-96 321.9 1.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF76340 - 0.07 13.4 0.0 0.17 12.2 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) Glyco_hydro_31 PF01055.26 ORF57891 - 6.3e-96 322.2 1.4 8.2e-96 321.9 1.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF57891 - 0.082 13.2 0.1 0.21 11.9 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) Glyco_hydro_31 PF01055.26 ORF38766 - 1.1e-97 328.1 2.7 1.3e-97 327.8 2.7 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF38766 - 0.072 13.4 0.1 0.18 12.1 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) KIF1B PF12423.8 ORF32580 - 0.0041 17.5 0.2 0.016 15.6 0.2 2.1 1 0 0 1 1 1 1 Kinesin protein 1B Sec2p PF06428.11 ORF32580 - 0.17 11.9 0.8 0.34 10.9 0.8 1.4 1 0 0 1 1 1 0 GDP/GTP exchange factor Sec2p DUF4834 PF16118.5 ORF106208 - 0.71 10.9 3.6 0.93 10.5 1.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) RIFIN PF02009.16 ORF106208 - 0.75 9.6 7.2 0.36 10.7 4.4 1.9 1 1 0 1 1 1 0 Rifin Orf78 PF06024.12 ORF106208 - 5.6 7.3 7.7 0.79 10.1 2.3 2.3 1 1 1 2 2 2 0 Orf78 (ac78) Alpha-amylase PF00128.24 NODE_2919_length_2004_cov_3.215338_g2027_i0reverse_frame_1 - 5.1e-30 105.2 10.5 3.3e-29 102.5 9.6 2.3 2 1 0 2 2 2 1 Alpha amylase, catalytic domain HSP90 PF00183.18 ORF8045 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF8045 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF8045 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF8045 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF8045 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) Peptidase_M1 PF01433.20 ORF76359 - 4.9e-39 134.1 0.0 8e-39 133.5 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF76359 - 8.5e-22 78.2 0.0 1.3e-21 77.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF76359 - 1.6e-12 47.5 0.0 3.9e-12 46.2 0.0 1.7 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M61 PF05299.12 ORF76359 - 0.27 11.6 3.5 3 8.3 1.5 3.3 3 1 0 3 3 3 0 M61 glycyl aminopeptidase DUF475 PF04332.15 ORF7559 - 0.0044 16.9 0.2 0.0087 15.9 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF475) HSP90 PF00183.18 ORF7018 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF7018 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF7018 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF7018 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF7018 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) NatB_MDM20 PF09797.9 ORF68957 - 5.9e-27 94.6 0.0 1e-26 93.8 0.0 1.4 1 0 0 1 1 1 1 N-acetyltransferase B complex (NatB) non catalytic subunit CHAD PF05235.14 ORF68957 - 0.015 15.2 4.5 0.065 13.2 0.1 2.8 2 1 0 2 2 2 0 CHAD domain FCD PF07729.12 ORF68957 - 0.043 14.3 3.6 1.3 9.5 0.1 3.7 4 0 0 4 4 4 0 FCD domain YkyA PF10368.9 ORF68957 - 0.095 12.4 1.8 0.19 11.4 1.8 1.4 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein HSP90 PF00183.18 ORF60490 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF60490 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF60490 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF60490 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF60490 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) HSP90 PF00183.18 ORF60158 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF60158 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF60158 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF60158 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF60158 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) HSP90 PF00183.18 ORF5602 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF5602 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF5602 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF5602 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF5602 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) PKD_channel PF08016.12 ORF49980 - 8.4e-20 70.8 20.9 3.4e-17 62.2 19.1 2.9 2 1 0 2 2 2 2 Polycystin cation channel Ion_trans PF00520.31 ORF49980 - 7.1e-09 35.3 16.8 1.4e-08 34.3 16.8 1.4 1 0 0 1 1 1 1 Ion transport protein HSP90 PF00183.18 ORF47778 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF47778 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF47778 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF47778 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF47778 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) HSP90 PF00183.18 ORF46749 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF46749 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF46749 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF46749 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF46749 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) ABC_membrane_2 PF06472.15 ORF38565 - 6.2e-88 294.7 3.9 8.7e-88 294.2 3.9 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 ABC_tran PF00005.27 ORF38565 - 2.5e-18 66.9 0.0 1.3e-17 64.6 0.0 2.2 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF38565 - 3.1e-06 26.8 0.4 0.078 12.4 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF38565 - 0.00016 22.2 0.0 0.00051 20.6 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 ORF38565 - 0.0011 18.9 0.0 0.0029 17.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF38565 - 0.014 15.1 0.1 0.032 14.0 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATPase_2 PF01637.18 ORF38565 - 0.056 13.3 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea HSP90 PF00183.18 ORF18685 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF18685 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF18685 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF18685 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF18685 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) Methyltransf_24 PF13578.6 ORF1664 - 1.1e-07 32.8 0.3 7.4e-07 30.2 0.1 2.3 2 0 0 2 2 2 1 Methyltransferase domain HSP90 PF00183.18 ORF11289 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF11289 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF11289 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF11289 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF11289 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) HSP90 PF00183.18 ORF10634 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF10634 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF10634 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF10634 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF10634 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) Peptidase_M49 PF03571.15 ORF84399 - 6.1e-200 665.3 6.4 7.1e-200 665.0 6.4 1.0 1 0 0 1 1 1 1 Peptidase family M49 Pro-kuma_activ PF09286.11 ORF84399 - 0.092 13.0 0.1 0.21 11.9 0.1 1.5 1 0 0 1 1 1 0 Pro-kumamolisin, activation domain SecA_SW PF07516.13 ORF73349 - 6.3e-69 232.0 5.3 6.3e-69 232.0 5.3 1.8 2 0 0 2 2 2 1 SecA Wing and Scaffold domain SecA_PP_bind PF01043.20 ORF73349 - 4.2e-39 133.6 0.3 1.1e-38 132.3 0.3 1.8 1 0 0 1 1 1 1 SecA preprotein cross-linking domain SecA_DEAD PF07517.14 ORF73349 - 1.3e-19 70.6 0.1 2.6e-19 69.6 0.1 1.6 1 0 0 1 1 1 1 SecA DEAD-like domain SEC-C PF02810.15 ORF73349 - 5.3e-11 42.2 9.7 8.5e-11 41.6 9.7 1.3 1 0 0 1 1 1 1 SEC-C motif DUF2175 PF09943.9 ORF73349 - 0.038 14.3 0.2 0.16 12.3 0.2 2.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) DUF2764 PF10962.8 ORF73349 - 0.088 12.3 1.2 0.16 11.5 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2764) Helicase_C PF00271.31 ORF73349 - 0.61 10.5 2.7 0.91 9.9 0.1 2.4 2 0 0 2 2 2 0 Helicase conserved C-terminal domain Myb_Cef PF11831.8 ORF28562 - 2.9e-40 138.3 1.8 2.9e-40 138.3 1.8 4.6 5 1 1 6 6 6 1 pre-mRNA splicing factor component AsnC_trans_reg2 PF17805.1 ORF28562 - 0.097 12.8 0.4 0.39 10.9 0.4 2.1 1 0 0 1 1 1 0 AsnC-like ligand binding domain HSP70 PF00012.20 ORF108743 - 4.9e-244 811.0 14.9 5.6e-244 810.8 14.9 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF108743 - 2.3e-19 69.4 0.6 2.9e-18 65.8 0.4 2.1 2 0 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 ORF108743 - 2.7e-05 24.5 2.7 0.44 11.0 0.1 3.7 3 2 0 3 3 3 2 Cell division protein FtsA FGGY_C PF02782.16 ORF108743 - 0.0027 17.5 0.0 0.01 15.6 0.0 1.9 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF108743 - 0.0036 16.3 0.1 0.27 10.2 0.1 2.3 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain PilM_2 PF11104.8 ORF108743 - 0.0053 15.8 0.5 3.1 6.7 0.0 2.8 3 1 0 3 3 3 2 Type IV pilus assembly protein PilM; Hydantoinase_A PF01968.18 ORF108743 - 0.095 11.9 1.7 0.53 9.5 0.2 2.6 3 1 0 3 3 3 0 Hydantoinase/oxoprolinase StbA PF06406.11 ORF108743 - 1 8.6 10.0 0.11 11.7 0.2 3.2 3 1 1 4 4 4 0 StbA protein Effector_1 PF04518.12 ORF108743 - 1.6 7.7 5.3 0.7 8.9 0.3 2.2 2 0 0 2 2 2 0 Effector from type III secretion system SIT PF15330.6 NODE_2934_length_2001_cov_1132.394710_g1816_i3forward_frame_2 - 0.017 15.6 0.5 3.5 8.1 0.0 3.2 3 0 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT TMEM154 PF15102.6 NODE_2934_length_2001_cov_1132.394710_g1816_i3forward_frame_2 - 0.077 12.9 0.0 0.25 11.2 0.0 1.9 2 0 0 2 2 2 0 TMEM154 protein family Pkinase PF00069.25 ORF51828 - 4.5e-62 209.8 0.1 9.2e-62 208.8 0.1 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF51828 - 7.6e-39 133.5 0.0 1.3e-38 132.8 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF51828 - 2.5e-09 37.6 0.2 7e-09 36.1 0.2 1.9 1 0 0 1 1 1 1 PH domain Pkinase_fungal PF17667.1 ORF51828 - 4.6e-05 22.4 0.5 0.00011 21.1 0.0 1.8 3 0 0 3 3 3 1 Fungal protein kinase EF-hand_1 PF00036.32 ORF51828 - 6.2e-05 22.3 8.3 0.00015 21.0 1.3 3.6 3 0 0 3 3 3 1 EF hand Kinase-like PF14531.6 ORF51828 - 0.00015 21.2 0.0 0.00031 20.2 0.0 1.5 1 0 0 1 1 1 1 Kinase-like EF-hand_6 PF13405.6 ORF51828 - 0.00022 20.9 5.6 0.0027 17.5 1.2 4.0 3 0 0 3 3 3 1 EF-hand domain RIO1 PF01163.22 ORF51828 - 0.00071 19.2 0.4 0.0014 18.2 0.4 1.5 1 0 0 1 1 1 1 RIO1 family YrbL-PhoP_reg PF10707.9 ORF51828 - 0.00074 19.1 0.1 0.0017 18.0 0.1 1.5 1 0 0 1 1 1 1 PhoP regulatory network protein YrbL EF-hand_7 PF13499.6 ORF51828 - 0.00087 19.7 1.8 0.00087 19.7 1.8 3.9 3 2 1 4 4 4 1 EF-hand domain pair DUF4502 PF14950.6 ORF51828 - 0.016 14.6 1.4 0.029 13.8 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4502) EF-hand_8 PF13833.6 ORF51828 - 0.02 14.7 2.8 0.093 12.6 2.3 2.5 1 1 1 2 2 2 0 EF-hand domain pair Kdo PF06293.14 ORF51828 - 0.021 14.2 0.0 0.041 13.2 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_5 PF13202.6 ORF51828 - 0.044 13.3 1.6 0.2 11.2 0.5 2.6 2 0 0 2 2 2 0 EF hand WASH_WAHD PF11945.8 ORF38855 - 1.3e-11 44.6 15.3 1.3e-11 44.6 15.3 2.6 1 1 0 2 2 2 1 WAHD domain of WASH complex Ion_trans PF00520.31 ORF107786 - 1.8e-23 83.1 14.8 2.4e-23 82.6 14.8 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF107786 - 4.5e-12 44.6 0.2 2.6e-05 23.4 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF107786 - 5.6e-10 39.5 0.0 1.8e-09 37.9 0.0 1.9 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF107786 - 6.5e-09 34.9 0.7 0.0044 16.5 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF107786 - 7.6e-08 31.7 0.1 0.0056 16.5 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF107786 - 1.4e-06 28.1 0.5 3e-05 23.8 0.1 2.6 1 1 1 2 2 2 1 EF-hand domain pair ATP-synt_8 PF00895.20 ORF107786 - 0.014 15.9 2.2 0.03 14.8 0.1 2.4 2 0 0 2 2 2 0 ATP synthase protein 8 EI24 PF07264.11 ORF107786 - 0.016 15.5 1.1 0.016 15.5 1.1 2.0 2 0 0 2 2 2 0 Etoposide-induced protein 2.4 (EI24) SieB PF14163.6 ORF107786 - 0.088 12.3 1.1 0.14 11.7 0.1 1.7 2 0 0 2 2 2 0 Super-infection exclusion protein B YMF19 PF02326.15 ORF107786 - 0.39 11.5 2.0 4.4 8.2 0.2 2.7 2 0 0 2 2 2 0 Plant ATP synthase F0 Anoctamin PF04547.12 ORF9477 - 0.0058 15.5 0.0 0.012 14.5 0.0 1.6 1 1 0 1 1 1 1 Calcium-activated chloride channel zf-B_box PF00643.24 ORF9477 - 0.015 15.5 5.0 0.015 15.5 5.0 2.0 2 0 0 2 2 2 0 B-box zinc finger Syndecan PF01034.20 ORF9477 - 2.7 8.0 6.8 0.96 9.4 0.3 3.2 3 0 0 3 3 3 0 Syndecan domain DUF1921 PF09081.10 ORF71626 - 0.0028 17.8 0.9 0.0091 16.2 0.9 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1921) Transketolase_N PF00456.21 ORF71462 - 5.7e-175 581.1 0.2 8.8e-175 580.5 0.2 1.3 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Transket_pyr PF02779.24 ORF71462 - 1.4e-44 151.9 0.6 3.6e-44 150.6 0.0 2.0 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF71462 - 3e-20 72.3 0.1 7.6e-20 71.1 0.1 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain DXP_synthase_N PF13292.6 ORF71462 - 5.7e-08 32.3 0.0 0.00018 20.9 0.0 2.3 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 ORF71462 - 0.00073 18.6 0.0 0.0015 17.6 0.0 1.5 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 ORF71462 - 0.037 13.8 6.4 0.11 12.3 1.4 3.2 2 1 0 2 2 2 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WD40 PF00400.32 ORF59590 - 5.7e-11 42.8 3.3 0.0016 19.2 0.0 5.7 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF59590 - 1.7e-06 28.2 0.0 2.4 8.5 0.0 4.6 4 2 1 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF59590 - 0.0026 16.8 0.0 0.042 12.8 0.0 2.1 2 0 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein SLY PF12485.8 ORF59590 - 1.1 10.0 9.8 0.06 14.1 1.9 2.3 2 0 0 2 2 2 0 Lymphocyte signaling adaptor protein FAM91_N PF14647.6 ORF50094 - 0.014 14.7 0.6 0.028 13.7 0.6 1.4 1 0 0 1 1 1 0 FAM91 N-terminus UCH PF00443.29 ORF50094 - 0.076 12.5 0.1 0.11 11.9 0.1 1.7 1 1 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase WD40 PF00400.32 ORF44962 - 5.7e-11 42.8 3.3 0.0016 19.2 0.0 5.7 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF44962 - 1.7e-06 28.2 0.0 2.4 8.5 0.0 4.6 4 2 1 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF44962 - 0.0026 16.8 0.0 0.042 12.8 0.0 2.1 2 0 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein SLY PF12485.8 ORF44962 - 1.1 10.0 9.8 0.06 14.1 1.9 2.3 2 0 0 2 2 2 0 Lymphocyte signaling adaptor protein TMF_DNA_bd PF12329.8 ORF44460 - 0.0013 18.7 8.2 0.0013 18.7 8.2 7.4 1 1 4 7 7 7 1 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF44460 - 0.0051 15.7 78.9 0.0086 15.0 20.4 4.6 1 1 3 4 4 4 2 Spc7 kinetochore protein CC2-LZ PF16516.5 ORF44460 - 0.012 15.9 2.6 0.012 15.9 2.6 7.2 1 1 6 8 8 7 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF1664 PF07889.12 ORF44460 - 0.064 13.3 51.0 0.97 9.5 5.7 5.8 1 1 6 7 7 7 0 Protein of unknown function (DUF1664) Mcp5_PH PF12814.7 ORF44460 - 0.17 12.0 2.4 0.27 11.4 0.6 2.3 2 0 0 2 2 2 0 Meiotic cell cortex C-terminal pleckstrin homology TPR_MLP1_2 PF07926.12 ORF44460 - 0.34 11.0 69.1 0.084 12.9 11.6 5.0 4 1 1 5 5 5 0 TPR/MLP1/MLP2-like protein MAD PF05557.13 ORF44460 - 0.75 8.1 78.3 0.5 8.7 25.6 3.3 1 1 2 3 3 3 0 Mitotic checkpoint protein Fib_alpha PF08702.10 ORF44460 - 1 9.5 68.9 0.39 10.9 9.3 4.9 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family Tropomyosin PF00261.20 ORF44460 - 1.7 8.0 73.3 0.13 11.6 13.8 4.0 1 1 3 4 4 4 0 Tropomyosin HAP1_N PF04849.13 ORF44460 - 3.7 6.7 70.0 4.4 6.4 28.0 4.1 1 1 3 4 4 4 0 HAP1 N-terminal conserved region DUF745 PF05335.13 ORF44460 - 8.6 6.0 47.6 1.7 8.3 1.5 4.6 3 2 2 5 5 5 0 Protein of unknown function (DUF745) Cyt-b5 PF00173.28 ORF35032 - 2.7e-35 120.4 0.1 1e-16 60.8 0.0 2.4 2 0 0 2 2 2 2 Cytochrome b5-like Heme/Steroid binding domain FAD_binding_2 PF00890.24 ORF35032 - 0.00011 21.4 0.0 0.00011 21.4 0.0 1.7 2 0 0 2 2 2 1 FAD binding domain BCL_N PF04714.13 ORF35032 - 0.00075 19.5 5.3 0.28 11.3 0.2 2.5 2 0 0 2 2 2 2 BCL7, N-terminal conserver region KleE PF17394.2 ORF35032 - 0.039 14.2 0.0 0.12 12.6 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein HrcA_DNA-bdg PF03444.15 ORF35032 - 0.088 12.5 0.3 16 5.3 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ABC_tran PF00005.27 ORF40518 - 8.4e-13 49.0 0.0 3.5e-12 47.0 0.0 2.1 1 1 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 ORF40518 - 0.0057 17.0 0.0 0.012 15.9 0.0 1.7 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF40518 - 0.074 13.3 0.1 0.21 11.8 0.1 1.7 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF40518 - 0.12 12.1 0.1 0.21 11.3 0.1 1.3 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF40518 - 0.2 11.4 0.3 6 6.6 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein Rhomboid PF01694.22 ORF95940 - 3.1e-07 30.5 19.7 0.0011 19.0 0.9 2.5 2 0 0 2 2 2 2 Rhomboid family RskA PF10099.9 ORF95940 - 0.8 10.0 3.6 0.93 9.8 2.4 1.7 2 0 0 2 2 2 0 Anti-sigma-K factor rskA DUF4231 PF14015.6 ORF95940 - 1.4 9.4 2.7 81 3.8 0.1 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF4231) PCB_OB PF17092.5 ORF95392 - 0.013 16.2 1.4 0.013 16.2 1.4 3.5 4 0 0 4 4 4 0 Penicillin-binding protein OB-like domain FH2 PF02181.23 ORF64187 - 1.7e-26 93.3 8.3 1.7e-26 93.3 8.3 2.4 2 2 0 2 2 2 1 Formin Homology 2 Domain Peptidase_C2 PF00648.21 ORF64187 - 0.07 12.1 0.3 0.17 10.9 0.0 1.7 2 0 0 2 2 2 0 Calpain family cysteine protease DUF2572 PF10833.8 ORF64187 - 0.15 11.8 0.1 0.15 11.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2572) Cas_Csy4 PF09618.10 ORF64187 - 4 7.5 6.6 0.35 11.0 0.2 2.3 3 0 0 3 3 3 0 CRISPR-associated protein (Cas_Csy4) ZU5 PF00791.20 ORF43538 - 0.039 14.3 0.0 0.15 12.4 0.0 2.0 2 0 0 2 2 2 0 ZU5 domain ZU5 PF00791.20 ORF40496 - 0.039 14.3 0.0 0.15 12.4 0.0 2.0 2 0 0 2 2 2 0 ZU5 domain PASTA PF03793.19 ORF25420 - 0.062 13.2 0.7 0.27 11.1 0.2 2.4 2 0 0 2 2 2 0 PASTA domain Rhomboid PF01694.22 ORF20343 - 3.1e-07 30.5 19.7 0.0011 19.0 0.9 2.5 2 0 0 2 2 2 2 Rhomboid family RskA PF10099.9 ORF20343 - 0.8 10.0 3.6 0.93 9.8 2.4 1.7 2 0 0 2 2 2 0 Anti-sigma-K factor rskA DUF4231 PF14015.6 ORF20343 - 1.4 9.4 2.7 81 3.8 0.1 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF4231) XPG_I PF00867.18 ORF106596 - 1.8e-22 79.5 0.0 1.6e-17 63.6 0.0 3.1 3 0 0 3 3 3 2 XPG I-region XPG_N PF00752.17 ORF106596 - 0.00033 21.1 0.0 0.001 19.5 0.0 1.8 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I_2 PF12813.7 ORF106596 - 0.0083 15.6 0.0 0.031 13.8 0.0 1.9 1 0 0 1 1 1 1 XPG domain containing DUF3323 PF11796.8 ORF106596 - 0.017 15.0 4.4 0.038 13.9 4.4 1.5 1 0 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) DUF4618 PF15397.6 ORF106596 - 0.051 13.0 0.7 0.081 12.3 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Lon_C PF05362.13 ORF34527 - 5.3e-98 326.6 0.1 8.8e-98 325.9 0.1 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain LON_substr_bdg PF02190.16 ORF34527 - 4.6e-19 69.1 0.1 8.9e-19 68.2 0.1 1.5 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 ORF34527 - 5.7e-18 65.6 0.0 1.2e-17 64.5 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF34527 - 4.4e-10 39.7 0.0 1.9e-09 37.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) ChlI PF13541.6 ORF34527 - 2.5e-07 30.6 0.0 5.5e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_PrkA PF08298.11 ORF34527 - 8.2e-06 25.0 0.0 1.3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 PrkA AAA domain AAA_16 PF13191.6 ORF34527 - 0.00011 22.6 0.0 0.00036 20.9 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.17 ORF34527 - 0.00048 19.9 0.0 0.0012 18.6 0.0 1.7 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_3 PF07726.11 ORF34527 - 0.0012 18.7 0.0 0.0035 17.2 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 ORF34527 - 0.0024 18.4 0.1 0.011 16.2 0.0 2.3 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 ORF34527 - 0.0033 17.2 0.0 0.02 14.6 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF34527 - 0.0068 16.7 0.2 0.084 13.1 0.2 2.5 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 ORF34527 - 0.011 15.7 0.1 0.3 11.0 0.0 2.5 2 0 0 2 2 2 0 NACHT domain AAA_2 PF07724.14 ORF34527 - 0.012 15.8 0.2 0.037 14.1 0.0 1.9 2 1 0 2 2 2 0 AAA domain (Cdc48 subfamily) AAA_14 PF13173.6 ORF34527 - 0.013 15.6 0.0 0.04 13.9 0.0 1.9 1 0 0 1 1 1 0 AAA domain ClpB_D2-small PF10431.9 ORF34527 - 0.04 14.0 0.8 0.14 12.2 0.8 2.0 1 0 0 1 1 1 0 C-terminal, D2-small domain, of ClpB protein AAA_33 PF13671.6 ORF34527 - 0.04 14.1 0.5 0.1 12.7 0.1 1.9 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 ORF34527 - 0.052 13.5 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 ORF34527 - 0.11 12.5 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 ORF34527 - 0.12 12.8 0.0 0.43 11.0 0.0 2.0 2 0 0 2 2 2 0 RNA helicase Rad17 PF03215.15 ORF34527 - 0.13 12.2 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain PPL4 PF18188.1 ORF18132 - 0.0028 17.6 0.0 1.3 8.9 0.1 2.4 2 0 0 2 2 2 2 Prim-pol 4 SAM_3 PF18016.1 ORF18132 - 0.11 12.3 0.2 12 5.8 0.0 2.6 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) DivIC PF04977.15 ORF63240 - 0.023 14.5 3.1 6.3 6.6 0.3 3.8 2 1 1 3 3 3 0 Septum formation initiator DUF2730 PF10805.8 ORF63240 - 0.42 10.7 2.2 11 6.2 0.9 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) HALZ PF02183.18 ORF63240 - 0.44 10.8 6.3 1.4 9.2 0.2 2.9 3 0 0 3 3 3 0 Homeobox associated leucine zipper Med9 PF07544.13 ORF63240 - 0.62 10.2 5.1 23 5.2 1.1 3.8 3 0 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 SlyX PF04102.12 ORF63240 - 1.2 9.8 3.7 2 9.1 0.5 3.0 3 1 0 3 3 3 0 SlyX Bap31_Bap29_C PF18035.1 ORF63240 - 1.2 9.2 8.9 1.3 9.0 0.1 3.5 3 0 0 3 3 3 0 Bap31/Bap29 cytoplasmic coiled-coil domain JIP_LZII PF16471.5 ORF63240 - 7.8 6.7 11.3 7.9 6.7 1.0 3.9 3 1 1 4 4 4 0 JNK-interacting protein leucine zipper II SieB PF14163.6 ORF60691 - 0.12 11.9 0.5 0.21 11.1 0.5 1.3 1 0 0 1 1 1 0 Super-infection exclusion protein B GlgX_C PF18390.1 ORF47026 - 1.8e-43 146.3 0.2 3.6e-43 145.3 0.2 1.6 1 0 0 1 1 1 1 Glycogen debranching enzyme C-terminal domain CBM_48 PF02922.18 ORF47026 - 6.2e-21 74.6 0.0 1.8e-20 73.1 0.0 1.8 2 0 0 2 2 2 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 ORF47026 - 1.3e-15 57.8 0.0 2.7e-09 37.1 0.0 3.2 2 1 0 2 2 2 2 Alpha amylase, catalytic domain Glyco_hydro_70 PF02324.16 ORF47026 - 0.26 9.4 0.0 0.39 8.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 70 AAA_2 PF07724.14 ORF42390 - 2.2e-51 174.4 0.0 6e-51 172.9 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF42390 - 4e-31 107.0 4.0 9.7e-31 105.8 4.0 1.7 1 0 0 1 1 1 1 AAA lid domain ClpB_D2-small PF10431.9 ORF42390 - 4.6e-20 71.5 0.0 2e-19 69.4 0.0 2.2 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 ORF42390 - 5e-18 65.8 0.0 1.3e-08 35.4 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF42390 - 8e-12 45.3 0.0 2.3e-11 43.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF42390 - 2.4e-06 27.8 0.3 0.0044 17.3 0.0 4.0 2 2 1 3 3 3 1 AAA domain Sigma54_activat PF00158.26 ORF42390 - 0.00019 21.2 0.0 0.00043 20.0 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain TniB PF05621.11 ORF42390 - 0.00033 20.1 0.0 0.06 12.8 0.0 2.5 2 0 0 2 2 2 1 Bacterial TniB protein AAA_18 PF13238.6 ORF42390 - 0.00061 20.4 0.0 0.0031 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain UVR PF02151.19 ORF42390 - 0.00092 18.9 9.9 0.0015 18.2 8.8 2.0 1 1 1 2 2 2 1 UvrB/uvrC motif AAA_14 PF13173.6 ORF42390 - 0.0023 17.9 0.0 0.35 10.9 0.0 2.8 2 0 0 2 2 2 1 AAA domain DUF2283 PF10049.9 ORF42390 - 0.0051 17.0 1.8 4.1 7.7 0.1 3.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2283) AAA_16 PF13191.6 ORF42390 - 0.0053 17.2 1.2 0.13 12.7 0.0 3.2 4 0 0 4 4 4 1 AAA ATPase domain IstB_IS21 PF01695.17 ORF42390 - 0.0087 15.8 0.0 0.028 14.2 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 ORF42390 - 0.017 15.3 0.6 0.12 12.6 0.0 2.7 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF42390 - 0.018 15.4 0.2 0.15 12.4 0.0 2.5 2 1 0 2 2 2 0 RNA helicase Torsin PF06309.11 ORF42390 - 0.018 15.1 0.0 0.057 13.5 0.0 1.8 1 0 0 1 1 1 0 Torsin Vps4_C PF09336.10 ORF42390 - 0.045 13.7 0.1 0.19 11.8 0.1 2.1 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain ResIII PF04851.15 ORF42390 - 0.048 13.7 0.0 0.92 9.5 0.0 2.7 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 ORF42390 - 0.065 13.0 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF42390 - 0.09 12.7 0.0 0.35 10.8 0.0 1.9 1 1 0 1 1 1 0 RsgA GTPase RuvB_N PF05496.12 ORF42390 - 0.1 12.4 0.2 1.9 8.2 0.0 2.7 3 0 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain ABC_tran PF00005.27 ORF42390 - 0.16 12.5 0.1 1.5 9.3 0.0 2.5 2 1 0 2 2 2 0 ABC transporter AAA_28 PF13521.6 ORF42390 - 1 9.6 5.4 0.92 9.7 0.1 3.4 2 2 2 4 4 4 0 AAA domain AAA_23 PF13476.6 ORF42390 - 1.3 9.5 6.0 1.1 9.7 0.0 2.6 2 1 0 2 2 2 0 AAA domain Methyltransf_25 PF13649.6 ORF39633 - 2e-05 25.2 0.5 8.8e-05 23.1 0.5 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF39633 - 0.00019 21.3 0.9 0.00049 19.9 0.2 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF39633 - 0.00028 21.5 0.4 0.00095 19.8 0.4 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF39633 - 0.0054 17.4 1.1 0.034 14.9 0.4 2.5 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF39633 - 0.011 15.6 0.2 0.024 14.5 0.1 1.7 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_32 PF13679.6 ORF39633 - 0.017 15.1 0.2 0.032 14.2 0.2 1.5 1 1 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 ORF39633 - 0.038 13.5 0.1 0.19 11.3 0.1 2.1 2 0 0 2 2 2 0 Methyltransferase small domain PrmA PF06325.13 ORF39633 - 0.17 11.2 0.1 0.45 9.9 0.0 1.7 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) AAA_2 PF07724.14 ORF109078 - 2.2e-51 174.4 0.0 6e-51 172.9 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF109078 - 4e-31 107.0 4.0 9.7e-31 105.8 4.0 1.7 1 0 0 1 1 1 1 AAA lid domain ClpB_D2-small PF10431.9 ORF109078 - 4.6e-20 71.5 0.0 2e-19 69.4 0.0 2.2 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 ORF109078 - 5e-18 65.8 0.0 1.3e-08 35.4 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF109078 - 8e-12 45.3 0.0 2.3e-11 43.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF109078 - 2.4e-06 27.8 0.3 0.0044 17.3 0.0 4.0 2 2 1 3 3 3 1 AAA domain Sigma54_activat PF00158.26 ORF109078 - 0.00019 21.2 0.0 0.00043 20.0 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain TniB PF05621.11 ORF109078 - 0.00033 20.1 0.0 0.06 12.8 0.0 2.5 2 0 0 2 2 2 1 Bacterial TniB protein AAA_18 PF13238.6 ORF109078 - 0.00061 20.4 0.0 0.0031 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain UVR PF02151.19 ORF109078 - 0.00092 18.9 9.9 0.0015 18.2 8.8 2.0 1 1 1 2 2 2 1 UvrB/uvrC motif AAA_14 PF13173.6 ORF109078 - 0.0023 17.9 0.0 0.35 10.9 0.0 2.8 2 0 0 2 2 2 1 AAA domain DUF2283 PF10049.9 ORF109078 - 0.0051 17.0 1.8 4.1 7.7 0.1 3.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2283) AAA_16 PF13191.6 ORF109078 - 0.0053 17.2 1.2 0.13 12.7 0.0 3.2 4 0 0 4 4 4 1 AAA ATPase domain IstB_IS21 PF01695.17 ORF109078 - 0.0087 15.8 0.0 0.028 14.2 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 ORF109078 - 0.017 15.3 0.6 0.12 12.6 0.0 2.7 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF109078 - 0.018 15.4 0.2 0.15 12.4 0.0 2.5 2 1 0 2 2 2 0 RNA helicase Torsin PF06309.11 ORF109078 - 0.018 15.1 0.0 0.057 13.5 0.0 1.8 1 0 0 1 1 1 0 Torsin Vps4_C PF09336.10 ORF109078 - 0.045 13.7 0.1 0.19 11.8 0.1 2.1 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain ResIII PF04851.15 ORF109078 - 0.048 13.7 0.0 0.92 9.5 0.0 2.7 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 ORF109078 - 0.065 13.0 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF109078 - 0.09 12.7 0.0 0.35 10.8 0.0 1.9 1 1 0 1 1 1 0 RsgA GTPase RuvB_N PF05496.12 ORF109078 - 0.1 12.4 0.2 1.9 8.2 0.0 2.7 3 0 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain ABC_tran PF00005.27 ORF109078 - 0.16 12.5 0.1 1.5 9.3 0.0 2.5 2 1 0 2 2 2 0 ABC transporter AAA_28 PF13521.6 ORF109078 - 1 9.6 5.4 0.92 9.7 0.1 3.4 2 2 2 4 4 4 0 AAA domain AAA_23 PF13476.6 ORF109078 - 1.3 9.5 6.0 1.1 9.7 0.0 2.6 2 1 0 2 2 2 0 AAA domain Kinesin PF00225.23 ORF97921 - 4e-64 216.7 1.1 4e-64 216.7 1.1 3.0 3 1 1 4 4 4 1 Kinesin motor domain Kinesin_assoc PF16183.5 ORF97921 - 0.0047 17.1 5.9 0.0047 17.1 5.9 3.4 2 1 1 3 3 3 1 Kinesin-associated Syntaxin-6_N PF09177.11 ORF97921 - 0.014 15.9 2.9 0.014 15.9 2.9 3.9 1 1 2 3 3 3 0 Syntaxin 6, N-terminal DUF2744 PF10910.8 ORF97921 - 0.019 15.0 0.1 0.058 13.4 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2744) Vps16_C PF04840.12 ORF90337 - 9.4e-34 116.9 1.1 2.7e-33 115.4 1.1 1.7 1 1 0 1 1 1 1 Vps16, C-terminal region Vps16_N PF04841.13 ORF90337 - 9.6e-32 110.2 0.0 1.5e-31 109.6 0.0 1.2 1 0 0 1 1 1 1 Vps16, N-terminal region CARD PF00619.21 ORF90337 - 0.018 15.0 0.1 0.71 9.9 0.1 3.1 2 0 0 2 2 2 0 Caspase recruitment domain DUF1897 PF09005.10 ORF90337 - 6.1 6.4 10.0 2.7 7.5 3.7 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1897) DnaJ PF00226.31 ORF67684 - 1.9e-11 43.9 0.1 4.3e-11 42.8 0.1 1.7 1 0 0 1 1 1 1 DnaJ domain Vps16_C PF04840.12 ORF47363 - 9.4e-34 116.9 1.1 2.7e-33 115.4 1.1 1.7 1 1 0 1 1 1 1 Vps16, C-terminal region Vps16_N PF04841.13 ORF47363 - 9.6e-32 110.2 0.0 1.5e-31 109.6 0.0 1.2 1 0 0 1 1 1 1 Vps16, N-terminal region CARD PF00619.21 ORF47363 - 0.018 15.0 0.1 0.71 9.9 0.1 3.1 2 0 0 2 2 2 0 Caspase recruitment domain DUF1897 PF09005.10 ORF47363 - 6.1 6.4 10.0 2.7 7.5 3.7 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1897) Myb_DNA-binding PF00249.31 ORF14157 - 1.4e-32 111.7 11.4 3.6e-12 46.3 2.1 3.6 3 0 0 3 3 3 3 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF14157 - 3.9e-24 84.7 14.4 1e-14 54.5 3.2 3.9 1 1 2 3 3 3 3 Myb-like DNA-binding domain Myb_DNA-bind_4 PF13837.6 ORF14157 - 3.7e-05 24.0 0.9 3.7e-05 24.0 0.9 4.9 3 1 2 5 5 5 2 Myb/SANT-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF14157 - 0.0051 16.7 0.8 0.0051 16.7 0.8 3.4 4 0 0 4 4 4 1 Myb DNA-binding like SLIDE PF09111.10 ORF14157 - 0.072 13.1 0.1 0.072 13.1 0.1 4.1 3 1 1 4 4 4 0 SLIDE Myb_DNA-bind_5 PF13873.6 ORF14157 - 0.19 11.8 11.6 0.27 11.3 0.1 4.2 4 1 1 5 5 5 0 Myb/SANT-like DNA-binding domain MADF_DNA_bdg PF10545.9 ORF14157 - 1.3 9.4 16.1 3.3 8.1 0.2 4.5 3 2 1 4 4 4 0 Alcohol dehydrogenase transcription factor Myb/SANT-like AMP-binding PF00501.28 ORF68050 - 5.9e-86 288.7 0.0 8.4e-86 288.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme PDH_E1_M PF17831.1 ORF6664 - 2.7e-106 354.3 0.1 4.5e-106 353.6 0.1 1.4 1 0 0 1 1 1 1 Pyruvate dehydrogenase E1 component middle domain Transketolase_N PF00456.21 ORF6664 - 7.4e-08 31.7 0.1 0.00036 19.6 0.1 2.3 2 0 0 2 2 2 2 Transketolase, thiamine diphosphate binding domain Transketolase_C PF02780.20 ORF6664 - 0.0077 16.1 0.1 0.12 12.3 0.0 2.7 3 0 0 3 3 3 1 Transketolase, C-terminal domain PFO_beta_C PF12367.8 ORF6664 - 0.045 13.9 0.1 0.15 12.2 0.1 1.9 1 0 0 1 1 1 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal AMP-binding PF00501.28 ORF66149 - 5.9e-86 288.7 0.0 8.4e-86 288.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme GAS2 PF02187.17 ORF5504 - 2.1e-09 37.3 0.1 1e-08 35.1 0.0 2.2 2 0 0 2 2 1 1 Growth-Arrest-Specific Protein 2 Domain Spc7 PF08317.11 ORF5504 - 3.6e-06 26.1 76.5 1.4e-05 24.2 9.5 5.3 1 1 5 6 6 6 3 Spc7 kinetochore protein Fib_alpha PF08702.10 ORF5504 - 0.0019 18.4 7.3 0.0019 18.4 7.3 6.6 1 1 4 7 7 7 2 Fibrinogen alpha/beta chain family HMMR_N PF15905.5 ORF5504 - 0.0024 17.4 75.5 0.22 10.9 15.8 4.6 1 1 2 4 4 4 4 Hyaluronan mediated motility receptor N-terminal TMF_DNA_bd PF12329.8 ORF5504 - 0.0024 17.8 10.5 0.0024 17.8 10.5 10.0 4 3 7 11 11 9 3 TATA element modulatory factor 1 DNA binding TolA_bind_tri PF16331.5 ORF5504 - 0.0044 17.1 5.8 0.0044 17.1 5.8 8.6 4 2 3 8 8 8 1 TolA binding protein trimerisation MscS_porin PF12795.7 ORF5504 - 0.0048 16.5 2.3 0.0048 16.5 2.3 4.8 2 1 2 4 4 3 2 Mechanosensitive ion channel porin domain Filament PF00038.21 ORF5504 - 0.021 14.4 70.4 0.054 13.1 18.0 4.9 1 1 3 4 4 4 0 Intermediate filament protein APG6_N PF17675.1 ORF5504 - 0.023 15.2 6.5 0.023 15.2 6.5 6.2 2 2 1 4 4 3 0 Apg6 coiled-coil region BST2 PF16716.5 ORF5504 - 0.027 15.1 1.4 0.027 15.1 1.4 7.9 3 2 7 10 10 9 0 Bone marrow stromal antigen 2 UPF0242 PF06785.11 ORF5504 - 0.029 14.5 67.4 0.044 13.9 11.9 5.0 1 1 2 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus AAA_13 PF13166.6 ORF5504 - 0.044 12.4 74.5 0.23 10.1 17.7 4.0 1 1 3 4 4 4 0 AAA domain MbeD_MobD PF04899.12 ORF5504 - 0.09 12.9 0.1 0.09 12.9 0.1 5.2 5 1 0 6 6 6 0 MbeD/MobD like Lebercilin PF15619.6 ORF5504 - 0.092 12.4 75.2 0.032 13.9 21.1 4.6 2 2 0 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease ATG16 PF08614.11 ORF5504 - 0.13 12.5 77.1 0.1 12.8 20.4 6.3 1 1 3 6 6 6 0 Autophagy protein 16 (ATG16) Golgin_A5 PF09787.9 ORF5504 - 0.14 11.6 70.8 0.54 9.7 16.7 5.1 1 1 4 5 5 5 0 Golgin subfamily A member 5 DUF2935 PF11155.8 ORF5504 - 0.14 12.4 17.4 3.8 7.9 4.6 5.1 2 2 0 2 2 2 0 Domain of unknown function (DUF2935) DUF3450 PF11932.8 ORF5504 - 0.23 10.7 65.3 0.3 10.4 13.7 6.7 2 1 5 7 7 7 0 Protein of unknown function (DUF3450) FPP PF05911.11 ORF5504 - 1.2 7.3 71.5 0.12 10.6 14.7 4.3 1 1 2 3 3 3 0 Filament-like plant protein, long coiled-coil IFP_35_N PF07334.13 ORF5504 - 1.2 9.3 0.0 1.2 9.3 0.0 6.5 9 1 0 9 9 6 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus GAS PF13851.6 ORF5504 - 1.2 8.4 77.8 0.015 14.6 10.8 5.5 3 2 1 5 5 5 0 Growth-arrest specific micro-tubule binding ERM PF00769.19 ORF5504 - 1.8 8.3 66.8 1.9 8.3 9.2 4.5 1 1 3 4 4 4 0 Ezrin/radixin/moesin family ApoO PF09769.9 ORF5504 - 2.6 8.0 9.9 24 4.9 1.0 4.8 4 3 1 5 5 5 0 Apolipoprotein O DUF5320 PF17253.2 ORF5504 - 3.7 8.7 27.2 0.33 12.0 0.4 6.3 6 0 0 6 6 6 0 Family of unknown function (DUF5320) DUF4407 PF14362.6 ORF5504 - 5.2 6.3 61.8 0.22 10.8 9.6 4.3 1 1 2 3 3 2 0 Domain of unknown function (DUF4407) MAD PF05557.13 ORF5504 - 6 5.1 77.8 4.2 5.6 26.7 3.4 1 1 2 3 3 3 0 Mitotic checkpoint protein CEP209_CC5 PF16574.5 ORF5504 - 9.1 6.5 59.7 0.095 12.9 10.0 6.8 1 1 5 6 6 6 0 Coiled-coil region of centrosome protein CE290 Fez1 PF06818.15 ORF5504 - 9.9 6.6 68.3 2.8 8.3 13.6 4.8 1 1 3 4 4 3 0 Fez1 Lig_chan PF00060.26 ORF107812 - 2.8e-13 49.9 0.2 4.5e-13 49.3 0.2 1.3 1 0 0 1 1 1 1 Ligand-gated ion channel DUF2649 PF10854.8 ORF107812 - 0.047 14.0 1.7 0.16 12.3 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2649) He_PIG PF05345.12 ORF97963 - 0.0011 19.1 5.7 0.02 15.1 4.1 3.2 2 0 0 2 2 2 1 Putative Ig domain MalM PF07148.12 ORF97963 - 0.0042 16.9 0.9 0.093 12.5 0.0 2.8 3 0 0 3 3 3 1 Maltose operon periplasmic protein precursor (MalM) Glycophorin_A PF01102.18 ORF97963 - 0.0046 17.2 0.0 0.019 15.2 0.0 2.1 1 0 0 1 1 1 1 Glycophorin A RVT_1 PF00078.27 ORF56731 - 6.8e-06 25.8 0.0 9.1e-06 25.3 0.0 1.2 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) VPS13_C PF16909.5 ORF92193 - 1.7e-47 161.5 9.2 1.8e-42 145.1 1.2 2.4 2 0 0 2 2 2 2 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 ORF92193 - 2.1e-11 44.0 0.0 4.7e-11 42.9 0.0 1.6 1 0 0 1 1 1 1 Autophagy-related protein C terminal domain Peptidase_S10 PF00450.22 ORF71533 - 8.9e-78 262.5 0.0 1.3e-77 262.0 0.0 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF71533 - 4.7e-05 23.7 13.9 0.00011 22.5 13.9 1.7 1 0 0 1 1 1 1 EGF-like domain EGF_Tenascin PF18720.1 ORF71533 - 8.8e-05 22.4 3.9 0.00018 21.4 3.9 1.5 1 0 0 1 1 1 1 Tenascin EGF domain DUF4051 PF13260.6 ORF71533 - 0.08 12.7 1.2 0.17 11.7 1.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) VPS13_C PF16909.5 ORF27203 - 1.7e-47 161.5 9.2 1.8e-42 145.1 1.2 2.4 2 0 0 2 2 2 2 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 ORF27203 - 2.1e-11 44.0 0.0 4.7e-11 42.9 0.0 1.6 1 0 0 1 1 1 1 Autophagy-related protein C terminal domain DUF812 PF05667.11 ORF95612 - 4.7e-55 187.6 56.6 4.7e-55 187.6 56.6 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF812) Nup54 PF13874.6 ORF95612 - 0.092 12.8 19.8 0.092 12.9 3.2 3.5 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 FUSC-like PF12805.7 ORF95612 - 0.17 11.0 1.2 0.64 9.1 1.2 2.0 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Baculo_PEP_C PF04513.12 ORF95612 - 0.44 10.6 19.1 0.7 9.9 6.6 4.0 2 1 3 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1863 PF08937.11 ORF94065 - 2.5e-05 24.6 0.6 5e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF94065 - 0.00016 22.3 0.8 0.0013 19.3 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF94065 - 0.056 12.2 18.1 0.096 11.4 18.1 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF94065 - 0.11 12.5 0.4 0.22 11.5 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF94065 - 6.4 6.6 7.0 2 8.2 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) 2OG-FeII_Oxy_5 PF13759.6 ORF86854 - 0.095 13.1 0.0 0.48 10.9 0.0 2.2 2 0 0 2 2 2 0 Putative 2OG-Fe(II) oxygenase DUF1863 PF08937.11 ORF80624 - 2.5e-05 24.6 0.6 5e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF80624 - 0.00016 22.3 0.8 0.0013 19.3 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF80624 - 0.056 12.2 18.1 0.096 11.4 18.1 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF80624 - 0.11 12.5 0.4 0.22 11.5 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF80624 - 6.4 6.6 7.0 2 8.2 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF1863 PF08937.11 ORF43771 - 2.5e-05 24.6 0.6 5e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF43771 - 0.00016 22.3 0.8 0.0013 19.3 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF43771 - 0.056 12.2 18.1 0.096 11.4 18.1 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF43771 - 0.11 12.5 0.4 0.22 11.5 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF43771 - 6.4 6.6 7.0 2 8.2 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF1863 PF08937.11 ORF33482 - 2.5e-05 24.6 0.6 5e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF33482 - 0.00016 22.3 0.8 0.0013 19.3 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF33482 - 0.056 12.2 18.1 0.096 11.4 18.1 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF33482 - 0.11 12.5 0.4 0.22 11.5 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF33482 - 6.4 6.6 7.0 2 8.2 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) Peptidase_M1 PF01433.20 ORF29411 - 1.8e-32 112.7 0.5 3.5e-32 111.8 0.5 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF29411 - 3.6e-21 76.2 1.0 5.7e-21 75.6 1.0 1.3 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF29411 - 1.8e-05 24.8 0.0 8.8e-05 22.6 0.0 2.2 2 1 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal TnpW PF14202.6 ORF29411 - 0.049 13.5 0.1 1.3 8.9 0.0 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW DUF1863 PF08937.11 ORF25815 - 2.5e-05 24.6 0.6 5e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF25815 - 0.00016 22.3 0.8 0.0013 19.3 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF25815 - 0.056 12.2 18.1 0.096 11.4 18.1 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF25815 - 0.11 12.5 0.4 0.22 11.5 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF25815 - 6.4 6.6 7.0 2 8.2 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) Peptidase_M1 PF01433.20 ORF21902 - 1.8e-32 112.7 0.5 3.5e-32 111.8 0.5 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF21902 - 3.6e-21 76.2 1.0 5.7e-21 75.6 1.0 1.3 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF21902 - 1.8e-05 24.8 0.0 8.8e-05 22.6 0.0 2.2 2 1 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal TnpW PF14202.6 ORF21902 - 0.049 13.5 0.1 1.3 8.9 0.0 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW Peptidase_M1 PF01433.20 ORF99142 - 4.5e-41 140.8 0.1 9.4e-41 139.8 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M1 domain Leuk-A4-hydro_C PF09127.11 ORF99142 - 5.3e-27 94.2 0.0 4.1e-26 91.3 0.0 2.2 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1_N PF17900.1 ORF99142 - 1.4e-17 64.4 0.3 2.5e-17 63.7 0.3 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TBCC_N PF16752.5 ORF99142 - 0.072 13.5 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain Peptidase_M1 PF01433.20 ORF44142 - 4.5e-41 140.8 0.1 9.4e-41 139.8 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M1 domain Leuk-A4-hydro_C PF09127.11 ORF44142 - 5.3e-27 94.2 0.0 4.1e-26 91.3 0.0 2.2 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1_N PF17900.1 ORF44142 - 1.4e-17 64.4 0.3 2.5e-17 63.7 0.3 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TBCC_N PF16752.5 ORF44142 - 0.072 13.5 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain Peptidase_M1 PF01433.20 ORF27552 - 4.5e-41 140.8 0.1 9.4e-41 139.8 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M1 domain Leuk-A4-hydro_C PF09127.11 ORF27552 - 5.3e-27 94.2 0.0 4.1e-26 91.3 0.0 2.2 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1_N PF17900.1 ORF27552 - 1.4e-17 64.4 0.3 2.5e-17 63.7 0.3 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TBCC_N PF16752.5 ORF27552 - 0.072 13.5 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain YPEB PF14620.6 ORF1488 - 0.032 13.6 0.9 0.16 11.3 0.9 2.2 1 1 0 1 1 1 0 YpeB sporulation TPD52 PF04201.15 ORF1488 - 0.1 12.2 6.1 7.9 6.1 1.6 3.3 2 1 0 3 3 3 0 Tumour protein D52 family CLZ PF16526.5 ORF1488 - 0.15 12.5 6.1 0.26 11.7 3.3 3.0 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Thioesterase PF00975.20 ORF53865 - 3.6e-13 50.2 0.1 1e-12 48.7 0.1 1.8 1 0 0 1 1 1 1 Thioesterase domain KAsynt_C_assoc PF16197.5 ORF53865 - 6.8e-08 33.0 0.0 3.9e-05 24.1 0.0 2.6 2 0 0 2 2 2 2 Ketoacyl-synthetase C-terminal extension Abhydrolase_6 PF12697.7 ORF53865 - 0.032 14.8 0.0 0.088 13.4 0.0 1.8 2 0 0 2 2 2 0 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF53865 - 0.039 13.2 0.1 0.095 12.0 0.1 1.6 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF53865 - 0.088 12.4 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Peptidase_M1 PF01433.20 ORF23769 - 8.9e-40 136.6 1.7 1.3e-39 136.0 1.7 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF23769 - 3.5e-24 86.0 0.7 5.7e-24 85.3 0.7 1.3 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF23769 - 6.2e-16 58.5 0.0 1.8e-15 57.0 0.0 1.8 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Myosin_TH1 PF06017.13 ORF23769 - 0.13 12.0 0.6 1.1 8.8 0.0 2.5 3 0 0 3 3 3 0 Unconventional myosin tail, actin- and lipid-binding AMP-binding PF00501.28 ORF97892 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF97892 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF97892 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF95725 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF95725 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF95725 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF86188 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF86188 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF86188 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks6.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks6.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks6.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks6.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:12:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- OEP PF02321.18 NODE_28320_length_762_cov_3.500688_g22280_i0forward_frame_3 - 6e-22 78.4 14.8 8e-22 78.0 14.8 1.1 1 0 0 1 1 1 1 Outer membrane efflux protein TPP_enzyme_N PF02776.18 NODE_28318_length_762_cov_4.646492_g22278_i0reverse_frame_3 - 1.9e-57 193.6 0.9 4.8e-57 192.3 0.1 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 NODE_28318_length_762_cov_4.646492_g22278_i0reverse_frame_3 - 4.9e-15 55.5 0.1 7.7e-15 54.8 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 NODE_28318_length_762_cov_4.646492_g22278_i0reverse_frame_3 - 0.00088 19.1 0.2 0.0011 18.8 0.2 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CO_dh PF02552.16 NODE_28318_length_762_cov_4.646492_g22278_i0reverse_frame_3 - 0.14 11.9 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit FlhE PF06366.13 NODE_28318_length_762_cov_4.646492_g22278_i0reverse_frame_2 - 0.025 14.6 0.1 0.046 13.7 0.1 1.4 1 0 0 1 1 1 0 Flagellar protein FlhE GST_C PF00043.25 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 3.4e-10 40.0 0.0 7.2e-10 39.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 2.9e-08 33.8 0.1 7.1e-08 32.6 0.1 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 9.2e-06 25.9 0.0 1.8e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 3.7e-05 24.1 0.0 7.1e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 7.8e-05 22.6 0.0 0.00015 21.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 0.00084 19.6 0.0 0.0029 17.9 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain Tom37 PF10568.9 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 0.057 13.7 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein GST_N_4 PF17172.4 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 0.071 13.9 0.0 0.16 12.8 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain Ank_2 PF12796.7 ORF99025 - 4.9e-36 123.2 0.0 7.5e-15 55.3 0.0 3.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF99025 - 5.9e-33 112.8 0.0 2.4e-09 37.5 0.0 4.6 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF99025 - 8.3e-27 90.3 0.0 0.0003 21.0 0.0 6.6 7 0 0 7 7 7 5 Ankyrin repeat Ank_5 PF13857.6 ORF99025 - 1.9e-22 79.0 0.0 0.0028 17.9 0.0 6.1 4 1 2 6 6 6 6 Ankyrin repeats (many copies) Ank PF00023.30 ORF99025 - 3.1e-19 68.5 0.0 0.015 15.7 0.0 5.8 6 0 0 6 6 6 5 Ankyrin repeat PAP2 PF01569.21 ORF95671 - 3.8e-19 68.8 7.7 8.9e-19 67.6 7.7 1.5 1 0 0 1 1 1 1 PAP2 superfamily DUF1455 PF07306.11 ORF95159 - 5.3 7.0 8.0 0.88 9.5 1.5 2.7 2 1 2 4 4 4 0 Protein of unknown function (DUF1455) PHM7_cyt PF14703.6 ORF95006 - 2.8e-09 37.4 4.2 1.9e-08 34.8 4.2 1.9 1 1 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter Z1 PF10593.9 ORF95006 - 0.017 14.6 1.7 0.066 12.7 1.8 1.6 1 1 1 2 2 2 0 Z1 domain RRM_1 PF00076.22 ORF95006 - 0.025 14.4 0.1 5.2 7.0 0.0 2.4 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Aminotran_1_2 PF00155.21 ORF94180 - 2.3e-37 129.0 0.0 2.9e-37 128.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF94180 - 0.022 13.7 0.1 0.067 12.1 0.0 1.8 2 1 0 2 2 2 0 Aminotransferase class-V Peptidase_S10 PF00450.22 ORF92858 - 2e-30 106.5 0.7 2.4e-30 106.3 0.7 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase cobW PF02492.19 ORF85928 - 5.7e-35 120.5 0.0 7.9e-35 120.0 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Arf PF00025.21 ORF85928 - 0.0066 15.9 0.0 0.053 13.0 0.0 2.0 2 0 0 2 2 2 1 ADP-ribosylation factor family Zeta_toxin PF06414.12 ORF85928 - 0.024 13.9 0.0 0.032 13.5 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 ORF85928 - 0.048 14.0 0.0 0.065 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 ORF85928 - 0.062 13.2 0.1 0.2 11.6 0.1 2.0 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.6 ORF85928 - 0.11 12.8 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain Viral_helicase1 PF01443.18 ORF85928 - 0.12 12.0 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Peripla_BP_6 PF13458.6 ORF85928 - 0.16 11.6 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein CTP_transf_like PF01467.26 ORF84990 - 4.9e-12 46.3 0.0 7.2e-12 45.7 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like Pkinase PF00069.25 ORF83235 - 3.2e-59 200.5 0.0 3.9e-59 200.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83235 - 1e-26 93.8 0.0 1.2e-26 93.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF83235 - 0.00083 18.8 0.1 0.0014 18.0 0.1 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF83235 - 0.0012 17.9 0.0 0.0016 17.5 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF83235 - 0.005 16.2 0.0 0.01 15.2 0.0 1.5 2 0 0 2 2 2 1 Kinase-like RIO1 PF01163.22 ORF83235 - 0.029 14.0 0.2 0.048 13.3 0.1 1.4 2 0 0 2 2 2 0 RIO1 family SEP PF08059.13 ORF78608 - 5.6e-25 87.7 0.0 1.9e-24 86.0 0.0 1.9 2 0 0 2 2 2 1 SEP domain UBX PF00789.20 ORF78608 - 3.6e-14 52.7 0.0 9.4e-14 51.4 0.0 1.7 2 0 0 2 2 2 1 UBX domain RE_MjaI PF09568.10 ORF78608 - 0.027 14.3 0.1 0.051 13.4 0.1 1.4 1 0 0 1 1 1 0 MjaI restriction endonuclease Beta-lactamase PF00144.24 ORF78206 - 3e-06 26.7 0.0 5.8e-06 25.8 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase DEP PF00610.21 ORF77725 - 0.043 13.9 0.0 0.11 12.6 0.0 1.6 1 0 0 1 1 1 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) DUF3528 PF12045.8 ORF77725 - 0.053 14.1 0.1 0.17 12.5 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3528) Glyco_hydro_31 PF01055.26 ORF76413 - 4.1e-58 197.6 4.5 4.6e-58 197.4 4.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Glyco_hydro_31 PF01055.26 ORF76404 - 1.2e-58 199.3 4.0 1.4e-58 199.2 4.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 STAR_dimer PF16544.5 ORF7299 - 0.17 11.5 0.0 0.3 10.7 0.0 1.3 1 0 0 1 1 1 0 Homodimerisation region of STAR domain protein CsgE PF10627.9 ORF72265 - 0.14 12.4 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Curli assembly protein CsgE Pkinase PF00069.25 ORF72239 - 1.5e-06 27.8 0.0 2.2e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Surp PF01805.20 ORF72239 - 0.42 10.6 1.8 0.54 10.3 0.1 2.0 2 0 0 2 2 2 0 Surp module T3SS_needle_E PF08988.10 ORF70683 - 0.22 11.7 1.7 6.5 7.0 0.1 2.4 2 0 0 2 2 2 0 Type III secretion system, cytoplasmic E component of needle DUF1848 PF08902.11 ORF69798 - 5.4e-34 118.1 0.1 8.4e-33 114.2 0.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF1848) Peptidase_C2 PF00648.21 ORF67454 - 6.6e-39 133.7 0.0 1e-38 133.1 0.0 1.3 1 1 0 1 1 1 1 Calpain family cysteine protease BTB PF00651.31 ORF66430 - 0.0034 17.6 0.0 0.0069 16.6 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain DUF1388 PF07142.12 ORF65903 - 3.9 7.5 5.0 5.9 6.9 0.3 2.4 2 0 0 2 2 2 0 Repeat of unknown function (DUF1388) PAP2 PF01569.21 ORF63348 - 3.8e-19 68.8 7.7 8.9e-19 67.6 7.7 1.5 1 0 0 1 1 1 1 PAP2 superfamily Torus PF16131.5 ORF62847 - 0.0027 18.4 10.4 0.038 14.7 2.2 2.4 2 0 0 2 2 2 2 Torus domain Cytochrom_C550 PF14495.6 ORF62847 - 0.72 9.6 2.4 0.5 10.1 0.2 1.8 2 0 0 2 2 2 0 Cytochrome c-550 domain REPA_OB_2 PF16900.5 ORF60888 - 1.4e-21 76.2 0.5 1.6e-17 63.2 0.0 2.4 2 0 0 2 2 2 2 Replication protein A OB domain tRNA_anti-codon PF01336.25 ORF60888 - 6.3e-10 38.9 0.5 1.8e-07 31.1 0.1 2.4 2 1 0 2 2 2 2 OB-fold nucleic acid binding domain DUF223 PF02721.14 ORF60888 - 0.00015 22.0 1.0 0.00031 21.0 0.8 1.6 1 1 0 1 1 1 1 Domain of unknown function DUF223 MFS_1 PF07690.16 ORF60315 - 2.5e-22 79.3 35.9 1.3e-19 70.3 18.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF60315 - 1.7e-07 30.5 7.7 1.7e-07 30.5 7.7 2.0 1 1 1 2 2 2 2 MFS_1 like family Nuc_H_symport PF03825.16 ORF60315 - 9e-05 21.6 12.2 0.00012 21.2 12.2 1.2 1 0 0 1 1 1 1 Nucleoside H+ symporter Aldedh PF00171.22 ORF5851 - 4.3e-16 58.5 0.0 5.8e-16 58.0 0.0 1.2 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Tup_N PF08581.10 ORF57908 - 0.017 15.4 10.9 0.017 15.4 10.9 3.3 1 1 3 4 4 4 0 Tup N-terminal COG2 PF06148.11 ORF57908 - 1.9 8.6 19.7 0.59 10.2 8.3 3.0 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF948 PF06103.11 ORF57908 - 3.8 7.8 13.9 0.39 11.0 0.2 2.6 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) TMPIT PF07851.13 ORF57908 - 9.9 5.3 28.2 0.62 9.3 16.5 2.5 1 1 1 2 2 2 0 TMPIT-like protein Exonuc_VII_L PF02601.15 ORF57908 - 9.9 5.6 22.9 4.4e+02 0.2 22.9 2.1 1 1 0 1 1 1 0 Exonuclease VII, large subunit Ribosomal_L2_C PF03947.18 ORF54014 - 1.2e-41 141.8 6.1 1.8e-41 141.3 6.1 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 ORF54014 - 2.3e-15 56.3 0.3 6.2e-15 54.9 0.3 1.7 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain DEP PF00610.21 ORF51852 - 2.6e-08 33.8 0.1 4.9e-08 32.9 0.1 1.5 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) DUF5603 PF18231.1 ORF51852 - 0.028 14.7 1.8 0.12 12.7 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5603) DUF547 PF04784.14 ORF51852 - 0.14 12.2 0.4 0.33 11.0 0.4 1.7 1 0 0 1 1 1 0 Protein of unknown function, DUF547 zf-RanBP PF00641.18 ORF49443 - 0.025 13.9 2.6 0.057 12.7 2.6 1.7 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others Vps36-NZF-N PF16988.5 ORF49443 - 0.64 9.5 5.4 3.5 7.1 5.4 2.1 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain RecR PF02132.15 ORF49443 - 1.1 8.9 5.3 0.69 9.5 2.5 2.1 2 0 0 2 2 2 0 RecR protein Patched PF02460.18 ORF4934 - 2e-31 108.9 12.9 2.2e-31 108.8 12.9 1.0 1 0 0 1 1 1 1 Patched family ACR_tran PF00873.19 ORF4934 - 3.9e-06 24.8 11.4 4.7e-06 24.6 11.4 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 ORF4934 - 0.23 10.3 8.5 0.28 10.1 8.5 1.2 1 0 0 1 1 1 0 MMPL family YfhO PF09586.10 ORF4934 - 3.5 5.8 13.1 4.3 5.4 0.6 2.0 2 0 0 2 2 2 0 Bacterial membrane protein YfhO LRR_6 PF13516.6 ORF46313 - 5.2e-06 26.1 0.0 5.2e-05 23.0 0.1 2.3 2 0 0 2 2 2 1 Leucine Rich repeat LRR_4 PF12799.7 ORF46313 - 0.02 15.3 0.0 0.043 14.3 0.0 1.6 1 0 0 1 1 1 0 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF46313 - 0.18 11.6 0.0 2 8.2 0.0 2.1 2 0 0 2 2 2 0 Leucine rich repeat TIM PF00121.18 ORF44453 - 6.7e-81 271.2 0.0 7.6e-81 271.1 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase Med12-PQL PF12144.8 ORF4317 - 0.0088 16.0 2.6 0.0088 16.0 2.6 1.8 2 0 0 2 2 2 1 Eukaryotic Mediator 12 catenin-binding domain Peptidase_M15_2 PF05951.13 ORF4317 - 0.13 11.9 4.6 1.9 8.1 0.5 2.4 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF882) Glyco_hydro_5_C PF18564.1 ORF42418 - 5.5e-07 30.0 0.2 9.3e-07 29.3 0.2 1.4 1 0 0 1 1 1 1 Glycoside hydrolase family 5 C-terminal domain Cellulase PF00150.18 ORF42418 - 1.6e-06 27.8 0.0 2.1e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) WWE PF02825.20 ORF40742 - 2.6e-08 34.3 0.3 3.8e-08 33.8 0.3 1.2 1 0 0 1 1 1 1 WWE domain DEC-1_N PF04625.13 ORF40742 - 0.64 9.0 7.5 0.81 8.6 7.5 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Ribophorin_I PF04597.14 ORF3984 - 5.6e-69 233.4 3.5 6.4e-69 233.2 3.5 1.0 1 0 0 1 1 1 1 Ribophorin I Hanta_G1 PF01567.16 ORF3984 - 0.0038 16.0 0.2 0.0052 15.5 0.2 1.1 1 0 0 1 1 1 1 Hantavirus glycoprotein G1 Pkinase PF00069.25 ORF36387 - 1.5e-06 27.8 0.0 2.2e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Surp PF01805.20 ORF36387 - 0.42 10.6 1.8 0.54 10.3 0.1 2.0 2 0 0 2 2 2 0 Surp module Glyco_hydro_16 PF00722.21 ORF36204 - 1.5e-23 83.2 0.1 1.9e-23 82.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 SKN1 PF03935.15 ORF36204 - 0.0082 14.6 0.1 0.017 13.6 0.1 1.3 1 1 0 1 1 1 1 Beta-glucan synthesis-associated protein (SKN1) OSCP PF00213.18 ORF34958 - 1.1e-19 71.2 1.4 1.6e-19 70.7 1.4 1.2 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit Glyco_hydro_10 PF00331.20 ORF34958 - 0.064 12.4 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 10 DUF4860 PF16152.5 ORF31633 - 0.0016 18.2 0.4 0.0057 16.5 0.4 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4860) DUF3836 PF12930.7 ORF31633 - 0.36 10.6 5.5 0.16 11.8 1.5 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF3836) DUF4358 PF14270.6 ORF31633 - 1.8 8.9 8.4 1.7 9.0 0.6 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4358) CorA PF01544.18 ORF31633 - 7.9 5.7 10.0 0.91 8.8 5.1 1.9 2 1 0 2 2 2 0 CorA-like Mg2+ transporter protein REPA_OB_2 PF16900.5 ORF31615 - 1.4e-21 76.2 0.5 1.6e-17 63.2 0.0 2.4 2 0 0 2 2 2 2 Replication protein A OB domain tRNA_anti-codon PF01336.25 ORF31615 - 6.3e-10 38.9 0.5 1.8e-07 31.1 0.1 2.4 2 1 0 2 2 2 2 OB-fold nucleic acid binding domain DUF223 PF02721.14 ORF31615 - 0.00015 22.0 1.0 0.00031 21.0 0.8 1.6 1 1 0 1 1 1 1 Domain of unknown function DUF223 Hydrolase_4 PF12146.8 ORF30105 - 4.8e-07 29.3 0.0 9.8e-07 28.3 0.0 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF30105 - 6.2e-07 29.3 0.1 1.7e-06 27.9 0.1 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold Cutinase PF01083.22 ORF30105 - 0.012 15.5 0.1 0.029 14.3 0.0 1.5 1 1 1 2 2 2 0 Cutinase DUF4778 PF16008.5 ORF29546 - 0.16 12.0 4.3 0.22 11.5 4.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) Securin PF04856.13 ORF29546 - 2.8 7.9 7.4 12 5.8 7.4 2.1 1 1 0 1 1 1 0 Securin sister-chromatid separation inhibitor LRR_6 PF13516.6 ORF29230 - 5.2e-06 26.1 0.0 5.2e-05 23.0 0.1 2.3 2 0 0 2 2 2 1 Leucine Rich repeat LRR_4 PF12799.7 ORF29230 - 0.02 15.3 0.0 0.043 14.3 0.0 1.6 1 0 0 1 1 1 0 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF29230 - 0.18 11.6 0.0 2 8.2 0.0 2.1 2 0 0 2 2 2 0 Leucine rich repeat UDPGT PF00201.18 ORF28211 - 4e-15 55.6 0.0 7.6e-15 54.7 0.0 1.4 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF28211 - 7.5e-10 39.0 0.0 1.2e-09 38.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain rRNA_processing PF08524.11 ORF27145 - 4.3 7.4 9.2 38 4.3 9.2 2.1 1 1 0 1 1 1 0 rRNA processing Acetate_kinase PF00871.17 ORF21495 - 1e-87 294.4 0.0 1.2e-87 294.2 0.0 1.0 1 0 0 1 1 1 1 Acetokinase family LacAB_rpiB PF02502.18 ORF21495 - 0.013 15.5 0.0 0.025 14.6 0.0 1.4 1 0 0 1 1 1 0 Ribose/Galactose Isomerase Pkinase PF00069.25 ORF21159 - 1.5e-06 27.8 0.0 2.2e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Surp PF01805.20 ORF21159 - 0.42 10.6 1.8 0.54 10.3 0.1 2.0 2 0 0 2 2 2 0 Surp module T3SS_needle_E PF08988.10 ORF18155 - 0.22 11.7 1.7 6.5 7.0 0.1 2.4 2 0 0 2 2 2 0 Type III secretion system, cytoplasmic E component of needle BAH PF01426.18 ORF17873 - 0.014 15.2 1.5 0.097 12.5 0.4 2.4 1 1 0 2 2 2 0 BAH domain FoP_duplication PF13865.6 ORF17373 - 3e-08 34.1 9.4 3e-08 34.1 9.4 4.2 2 1 1 3 3 3 1 C-terminal duplication domain of Friend of PRMT1 ELO PF01151.18 ORF15321 - 1e-49 169.3 11.8 1.2e-49 169.1 11.8 1.0 1 0 0 1 1 1 1 GNS1/SUR4 family T3SS_needle_E PF08988.10 ORF15010 - 0.22 11.7 1.7 6.5 7.0 0.1 2.4 2 0 0 2 2 2 0 Type III secretion system, cytoplasmic E component of needle Acid_PPase PF12689.7 ORF112416 - 0.0027 17.6 0.0 0.014 15.3 0.0 1.9 2 0 0 2 2 2 1 Acid Phosphatase MitMem_reg PF13012.6 ORF111002 - 2e-30 105.5 0.1 3.7e-30 104.6 0.1 1.4 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 ORF111002 - 2e-08 34.2 3.1 5.7e-08 32.8 0.0 2.5 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease AAA_23 PF13476.6 ORF111002 - 0.0048 17.4 7.2 0.0062 17.1 7.2 1.2 1 0 0 1 1 1 1 AAA domain Phyto_Pns9_10 PF05878.11 ORF111002 - 0.0058 15.8 0.9 0.54 9.3 0.2 2.1 1 1 1 2 2 2 2 Phytoreovirus nonstructural protein Pns9/Pns10 DUF1682 PF07946.14 ORF111002 - 0.012 14.8 5.3 0.018 14.3 5.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) FYDLN_acid PF09538.10 ORF111002 - 0.013 16.1 4.4 4.2 8.1 5.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) MscS_TM PF12794.7 ORF111002 - 0.097 11.5 0.3 0.13 11.1 0.3 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Connexin PF00029.19 ORF111002 - 0.28 10.9 1.7 0.37 10.5 1.7 1.2 1 0 0 1 1 1 0 Connexin BTB PF00651.31 ORF110358 - 5.7e-11 42.6 0.0 1e-10 41.8 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain NitrOD5 PF11537.8 ORF110358 - 0.034 14.3 0.1 0.12 12.6 0.0 1.8 2 0 0 2 2 2 0 Nitrosopumilus output domain 5 GSH-S_N PF02951.14 ORF110358 - 0.094 12.8 0.5 0.16 12.1 0.5 1.4 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, N-terminal domain FoP_duplication PF13865.6 ORF105380 - 3e-08 34.1 9.4 3e-08 34.1 9.4 4.2 2 1 1 3 3 3 1 C-terminal duplication domain of Friend of PRMT1 Molybdopterin PF00384.22 ORF10463 - 8.4e-31 107.4 0.0 1.4e-30 106.7 0.0 1.3 1 0 0 1 1 1 1 Molybdopterin oxidoreductase NADH_dhqG_C PF09326.11 ORF10463 - 1.5e-15 57.6 0.0 2.6e-15 56.8 0.0 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase subunit G, C-terminal Trypsin_2 PF13365.6 ORF10463 - 0.055 14.4 0.0 1.4 9.8 0.0 2.1 1 1 1 2 2 2 0 Trypsin-like peptidase domain Methyltransf_11 PF08241.12 ORF10452 - 0.0009 19.8 0.0 0.0032 18.1 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Aa_trans PF01490.18 ORF102884 - 3.8e-12 45.6 0.1 4.9e-12 45.3 0.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein GnRH PF00446.17 ORF102884 - 0.3 11.6 0.1 0.3 11.6 0.1 3.1 3 0 0 3 3 3 0 Gonadotropin-releasing hormone MRP-S32 PF10210.9 ORF101471 - 0.031 14.8 2.3 0.082 13.5 2.3 1.7 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S32 Doppel PF11466.8 NODE_28665_length_754_cov_90.016690_g22579_i0reverse_frame_1 - 5.5 6.7 6.1 0.36 10.5 0.2 2.1 2 0 0 2 2 2 0 Prion-like protein Doppel Synaptobrevin PF00957.21 NODE_28660_length_754_cov_109.328234_g22574_i0forward_frame_1 - 1.1 9.1 11.9 1.2 9.0 4.5 2.3 2 0 0 2 2 2 0 Synaptobrevin DUF5383 PF17355.2 NODE_28660_length_754_cov_109.328234_g22574_i0forward_frame_1 - 9.5 6.6 9.2 0.62 10.4 1.5 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5383) DUF1593 PF07632.11 NODE_28603_length_755_cov_312.113889_g22526_i0forward_frame_1 - 0.049 13.1 0.0 0.087 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1593) Dioxygenase_C PF00775.21 NODE_28600_length_755_cov_464.623611_g22524_i0reverse_frame_1 - 0.094 12.1 0.0 0.17 11.3 0.0 1.4 1 0 0 1 1 1 0 Dioxygenase Nuc_H_symport PF03825.16 NODE_28532_length_757_cov_2.894737_g22464_i0reverse_frame_3 - 3.3e-113 378.7 9.6 3.6e-113 378.6 9.6 1.0 1 0 0 1 1 1 1 Nucleoside H+ symporter MFS_1_like PF12832.7 NODE_28532_length_757_cov_2.894737_g22464_i0reverse_frame_3 - 1.4e-22 80.1 12.7 1.8e-22 79.7 12.7 1.0 1 0 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 NODE_28532_length_757_cov_2.894737_g22464_i0reverse_frame_3 - 5.2e-11 42.1 20.5 6.4e-11 41.8 20.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_28532_length_757_cov_2.894737_g22464_i0reverse_frame_3 - 9e-05 21.5 7.7 9e-05 21.5 7.7 2.3 2 1 0 2 2 2 1 Sugar (and other) transporter YwiC PF14256.6 NODE_28517_length_757_cov_172.009695_g22449_i0reverse_frame_2 - 0.58 10.5 3.3 0.46 10.8 1.1 1.8 1 1 1 2 2 2 0 YwiC-like protein UBM PF14377.6 NODE_28498_length_758_cov_12.708160_g22435_i0reverse_frame_2 - 0.15 11.6 0.4 0.29 10.7 0.4 1.5 1 0 0 1 1 1 0 Ubiquitin binding region HMW1C_N PF18071.1 NODE_28498_length_758_cov_12.708160_g22435_i0forward_frame_3 - 0.14 11.9 1.7 8.1 6.2 0.5 3.1 2 1 0 2 2 2 0 HMW1C N-terminal Spc7 PF08317.11 NODE_28493_length_758_cov_94.239281_g22430_i0reverse_frame_3 - 0.099 11.5 11.2 0.15 10.9 11.2 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Mss4 PF04421.13 NODE_28493_length_758_cov_94.239281_g22430_i0reverse_frame_3 - 0.23 11.6 2.5 0.63 10.2 0.0 2.4 2 1 0 2 2 2 0 Mss4 protein SlyX PF04102.12 NODE_28493_length_758_cov_94.239281_g22430_i0reverse_frame_3 - 0.4 11.3 4.2 1.4 9.6 4.2 2.0 1 1 0 1 1 1 0 SlyX UvrD_C PF13361.6 NODE_28493_length_758_cov_94.239281_g22430_i0reverse_frame_3 - 0.72 9.2 8.9 1 8.7 8.9 1.2 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain Oxidored_q2 PF00420.24 NODE_28477_length_758_cov_170.627939_g22416_i0forward_frame_2 - 0.00074 19.1 3.7 0.0024 17.5 0.7 2.2 2 0 0 2 2 2 2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Phage_integrase PF00589.22 NODE_28458_length_759_cov_3.237569_g22401_i0forward_frame_3 - 0.00013 21.8 0.0 0.00018 21.3 0.0 1.3 1 0 0 1 1 1 1 Phage integrase family LRR_4 PF12799.7 NODE_28455_length_759_cov_53.546961_g22398_i0forward_frame_2 - 4.6e-06 26.9 4.9 6e-05 23.3 0.4 3.0 3 0 0 3 3 3 1 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 NODE_28455_length_759_cov_53.546961_g22398_i0forward_frame_2 - 5.9e-05 22.6 0.2 7.6e-05 22.3 0.2 1.2 1 0 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 NODE_28455_length_759_cov_53.546961_g22398_i0forward_frame_2 - 0.0033 17.1 5.4 0.0068 16.2 3.3 2.4 2 1 1 3 3 3 2 Leucine rich repeat LRR_6 PF13516.6 NODE_28455_length_759_cov_53.546961_g22398_i0forward_frame_2 - 0.054 13.6 1.9 1 9.6 0.1 3.2 2 1 1 3 3 3 0 Leucine Rich repeat PBP_dimer PF03717.15 NODE_28452_length_759_cov_67.918508_g22396_i0forward_frame_2 - 0.68 10.2 6.1 1.1 9.6 6.1 1.4 1 1 0 1 1 1 0 Penicillin-binding Protein dimerisation domain TMEM82 PF15816.5 NODE_28450_length_759_cov_81.382597_g22394_i0reverse_frame_3 - 0.037 13.0 1.6 0.068 12.1 1.6 1.4 1 0 0 1 1 1 0 Transmembrane protein 82 YMF19 PF02326.15 NODE_28450_length_759_cov_81.382597_g22394_i0reverse_frame_3 - 5.9 7.8 10.7 2 9.2 3.4 2.5 2 0 0 2 2 2 0 Plant ATP synthase F0 Rubredoxin_2 PF18073.1 NODE_28450_length_759_cov_81.382597_g22394_i0forward_frame_2 - 0.05 13.3 0.6 0.093 12.5 0.6 1.4 1 0 0 1 1 1 0 Rubredoxin metal binding domain adh_short PF00106.25 NODE_28441_length_759_cov_122.859116_g22385_i0reverse_frame_2 - 7e-13 48.5 0.0 2.4e-08 33.7 0.0 2.3 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_28441_length_759_cov_122.859116_g22385_i0reverse_frame_2 - 2.7e-07 30.4 0.0 4.1e-06 26.5 0.0 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF4600 PF15372.6 NODE_28437_length_759_cov_160.399171_g22381_i0reverse_frame_2 - 0.15 12.5 5.8 0.29 11.6 5.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4600) MORN PF02493.20 NODE_28435_length_759_cov_164.662983_g22379_i0forward_frame_3 - 2.7e-09 36.4 23.2 2.7e-05 23.8 0.1 5.7 6 0 0 6 6 6 4 MORN repeat DUF1614 PF07758.11 NODE_28424_length_759_cov_586.524862_g22368_i0reverse_frame_3 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1614) zf-C2H2 PF00096.26 NODE_28424_length_759_cov_586.524862_g22368_i0forward_frame_3 - 1.4e-10 41.1 12.0 2.1e-06 27.9 2.1 3.5 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_28424_length_759_cov_586.524862_g22368_i0forward_frame_3 - 3.2e-07 30.5 3.6 7e-05 23.1 0.2 3.1 2 0 0 2 2 2 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 NODE_28424_length_759_cov_586.524862_g22368_i0forward_frame_3 - 4.2e-07 29.6 2.4 4.2e-07 29.6 2.4 2.9 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_4 PF13894.6 NODE_28424_length_759_cov_586.524862_g22368_i0forward_frame_3 - 1e-05 25.9 13.1 0.0011 19.6 1.1 3.3 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 NODE_28424_length_759_cov_586.524862_g22368_i0forward_frame_3 - 8.6e-05 22.8 0.2 0.00022 21.5 0.2 1.7 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 NODE_28424_length_759_cov_586.524862_g22368_i0forward_frame_3 - 0.0066 16.2 0.1 0.015 15.0 0.1 1.6 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 NODE_28424_length_759_cov_586.524862_g22368_i0forward_frame_3 - 0.049 13.7 2.0 0.049 13.7 2.0 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Methyltransf_11 PF08241.12 NODE_28424_length_759_cov_586.524862_g22368_i0forward_frame_3 - 0.16 12.7 0.4 0.91 10.2 0.1 2.2 1 1 2 3 3 3 0 Methyltransferase domain SBF PF01758.16 ORF99846 - 0.04 13.6 0.1 0.063 12.9 0.1 1.3 1 0 0 1 1 1 0 Sodium Bile acid symporter family DnaJ_C PF01556.18 ORF981 - 5.7e-40 136.8 0.0 7.1e-40 136.5 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DUF2475 PF10629.9 ORF97653 - 9.3e-08 32.2 3.4 0.00019 21.6 0.6 3.4 2 1 1 3 3 3 2 Protein of unknown function (DUF2475) PIN_2 PF10130.9 ORF96935 - 0.044 14.0 1.1 0.082 13.1 1.1 1.4 1 0 0 1 1 1 0 PIN domain KdgM PF06178.13 ORF95304 - 1.2e-91 306.3 10.2 1.4e-91 306.1 10.2 1.0 1 0 0 1 1 1 1 Oligogalacturonate-specific porin protein (KdgM) BBP2 PF07642.11 ORF95304 - 1.4e-05 24.4 5.9 0.00021 20.5 5.9 2.2 1 1 0 1 1 1 1 Putative beta-barrel porin-2, OmpL-like. bbp2 OMP_b-brl PF13505.6 ORF95304 - 0.036 14.2 7.6 0.5 10.5 6.5 2.3 1 1 1 2 2 2 0 Outer membrane protein beta-barrel domain Porin_OmpG PF09381.10 ORF95304 - 0.053 13.3 9.8 0.052 13.3 7.8 1.8 2 0 0 2 2 2 0 Outer membrane protein G (OmpG) Melibiase_C PF17801.1 ORF94108 - 4.1e-12 46.0 0.0 7.3e-12 45.2 0.0 1.4 1 0 0 1 1 1 1 Alpha galactosidase C-terminal beta sandwich domain Melibiase_2 PF16499.5 ORF94108 - 3.5e-06 26.4 0.1 0.00024 20.3 0.1 2.4 1 1 0 1 1 1 1 Alpha galactosidase A PSII_Pbs31 PF18240.1 ORF93519 - 0.24 11.8 0.2 0.24 11.8 0.2 2.9 2 2 1 3 3 3 0 Photosystem II Psb31 protein Prenyltransf PF01255.19 ORF92545 - 7.8e-81 270.9 0.1 8.9e-81 270.7 0.1 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Glyco_hydro_97 PF10566.9 ORF92545 - 0.074 12.3 0.0 0.097 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycoside hydrolase 97 Abhydrolase_6 PF12697.7 ORF91365 - 2e-18 67.8 4.1 2.4e-18 67.5 4.1 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF91365 - 2.3e-10 40.6 2.3 4.7e-10 39.5 2.3 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF91365 - 1.4e-07 31.1 0.0 2e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 ORF91365 - 1.2e-05 25.5 0.1 0.00039 20.6 0.0 2.1 2 0 0 2 2 2 1 Thioesterase domain Lipase_3 PF01764.25 ORF91365 - 0.0057 16.5 0.2 0.012 15.5 0.0 1.6 2 0 0 2 2 2 1 Lipase (class 3) OppC_N PF12911.7 ORF91095 - 2.7 8.1 5.4 1.3 9.1 1.0 2.5 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C RNA_pol PF00940.19 ORF86239 - 0.049 12.5 0.5 0.059 12.2 0.5 1.1 1 0 0 1 1 1 0 DNA-dependent RNA polymerase TFIIA PF03153.13 ORF86239 - 0.13 12.2 15.1 0.16 11.9 15.1 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF702 PF05142.12 ORF86239 - 0.15 12.6 4.7 0.052 14.0 1.9 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF702) SF-assemblin PF06705.11 ORF86239 - 0.9 8.8 5.0 0.29 10.4 0.8 2.0 2 0 0 2 2 2 0 SF-assemblin/beta giardin Ndc1_Nup PF09531.10 ORF86239 - 1.4 7.5 5.4 1.5 7.5 5.4 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup GREB1 PF15782.5 ORF86239 - 1.9 5.5 8.5 2.1 5.4 8.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Apolipoprotein PF01442.18 ORF86239 - 2.8 7.8 17.8 19 5.1 17.8 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Sulfotransfer_2 PF03567.14 ORF85734 - 0.0022 18.0 0.0 1.2 9.0 0.0 2.1 2 0 0 2 2 2 2 Sulfotransferase family BPD_transp_2 PF02653.16 ORF84160 - 3.7e-45 154.2 12.4 4.3e-45 154.0 12.4 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF2975 PF11188.8 ORF84160 - 0.11 12.4 4.1 0.72 9.7 1.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2975) Helicase_C_2 PF13307.6 ORF83406 - 1.7e-35 122.7 0.0 2.1e-35 122.4 0.0 1.1 1 0 0 1 1 1 1 Helicase C-terminal domain Helicase_C PF00271.31 ORF83406 - 0.05 14.0 0.0 0.095 13.1 0.0 1.5 1 1 0 1 1 1 0 Helicase conserved C-terminal domain Exop_C PF18559.1 ORF81313 - 0.11 12.3 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Galactose-binding domain-like Ank_2 PF12796.7 ORF7846 - 1.4e-29 102.5 3.9 4.5e-15 56.0 0.1 2.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF7846 - 2e-23 82.4 1.3 2.3e-08 34.4 0.1 3.5 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF7846 - 8.1e-14 50.4 0.0 5.7e-05 23.2 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF7846 - 1.1e-13 51.0 0.3 0.0032 17.8 0.0 4.3 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF7846 - 1.3e-12 47.7 0.1 1e-08 35.2 0.1 3.3 1 1 2 3 3 3 2 Ankyrin repeats (many copies) STI1 PF17830.1 ORF7846 - 1.7e-07 31.0 2.5 6.2e-05 22.9 1.2 2.6 2 0 0 2 2 2 2 STI1 domain MHB PF16525.5 ORF7846 - 0.041 14.1 0.4 1 9.7 0.0 2.6 3 0 0 3 3 3 0 Haemophore, haem-binding Com_YlbF PF06133.11 ORF7846 - 0.4 11.3 6.4 0.99 10.0 3.1 2.6 2 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA Scramblase PF03803.15 ORF74993 - 2.6e-11 43.3 0.1 3.6e-11 42.8 0.1 1.1 1 0 0 1 1 1 1 Scramblase Proteasome PF00227.26 ORF71530 - 2.3e-39 134.9 0.0 3.1e-39 134.4 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF71530 - 3.9e-06 26.4 0.1 3.9e-06 26.4 0.1 1.9 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature MRI PF15325.6 ORF71310 - 0.0061 17.6 1.3 0.011 16.8 1.3 1.4 1 0 0 1 1 1 1 Modulator of retrovirus infection Proteasome PF00227.26 ORF69800 - 2.3e-39 134.9 0.0 3.1e-39 134.4 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF69800 - 3.9e-06 26.4 0.1 3.9e-06 26.4 0.1 1.9 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature PWI PF01480.17 ORF67821 - 1.3e-30 105.5 0.0 2.5e-30 104.6 0.0 1.5 1 0 0 1 1 1 1 PWI domain Atg14 PF10186.9 ORF67821 - 0.013 14.6 1.6 0.025 13.7 1.6 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 UPF0242 PF06785.11 ORF67821 - 2.8 8.0 7.6 0.4 10.8 2.9 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus RNA_pol PF00940.19 ORF61127 - 0.049 12.5 0.5 0.059 12.2 0.5 1.1 1 0 0 1 1 1 0 DNA-dependent RNA polymerase TFIIA PF03153.13 ORF61127 - 0.13 12.2 15.1 0.16 11.9 15.1 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF702 PF05142.12 ORF61127 - 0.15 12.6 4.7 0.052 14.0 1.9 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF702) SF-assemblin PF06705.11 ORF61127 - 0.9 8.8 5.0 0.29 10.4 0.8 2.0 2 0 0 2 2 2 0 SF-assemblin/beta giardin Ndc1_Nup PF09531.10 ORF61127 - 1.4 7.5 5.4 1.5 7.5 5.4 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup GREB1 PF15782.5 ORF61127 - 1.9 5.5 8.5 2.1 5.4 8.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Apolipoprotein PF01442.18 ORF61127 - 2.8 7.8 17.8 19 5.1 17.8 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Ephrin_rec_like PF07699.13 ORF59689 - 6e-25 86.7 41.1 2.5e-09 36.8 2.2 5.7 1 1 5 6 6 6 6 Putative ephrin-receptor like NCD3G PF07562.14 ORF59689 - 1.3e-08 34.7 34.8 0.014 15.4 0.9 6.4 1 1 8 9 9 9 8 Nine Cysteines Domain of family 3 GPCR PknG_rubred PF16919.5 ORF59689 - 0.048 13.8 1.8 0.048 13.8 1.8 3.4 4 0 0 4 4 4 0 Protein kinase G rubredoxin domain DUF1840 PF08895.11 ORF59689 - 0.1 13.0 1.0 0.15 12.4 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) TNFR_c6 PF00020.18 ORF59689 - 0.37 11.2 33.8 0.62 10.5 1.2 6.9 2 2 7 9 9 9 0 TNFR/NGFR cysteine-rich region Ribosomal_60s PF00428.19 ORF59689 - 3 8.5 11.4 9.3 6.9 11.4 1.8 1 0 0 1 1 1 0 60s Acidic ribosomal protein DUF2475 PF10629.9 ORF59463 - 3e-07 30.6 6.4 0.00019 21.6 0.6 3.5 2 2 1 3 3 3 2 Protein of unknown function (DUF2475) PPR_2 PF13041.6 ORF58490 - 6.4e-11 42.3 0.0 0.017 15.3 0.0 4.7 5 0 0 5 5 5 3 PPR repeat family PPR PF01535.20 ORF58490 - 7.9e-07 28.9 0.0 0.00044 20.3 0.0 4.3 4 0 0 4 4 4 1 PPR repeat PPR_3 PF13812.6 ORF58490 - 0.00011 22.1 0.0 8.9 6.5 0.0 4.0 3 2 2 5 5 5 2 Pentatricopeptide repeat domain MEIOC PF15189.6 ORF58490 - 0.12 12.0 0.8 0.53 9.9 0.3 1.9 2 0 0 2 2 2 0 Meiosis-specific coiled-coil domain-containing protein MEIOC PPR_1 PF12854.7 ORF58490 - 0.15 11.8 0.0 7.2 6.4 0.0 2.9 3 0 0 3 3 3 0 PPR repeat Ank_2 PF12796.7 ORF5830 - 6.8e-14 52.2 0.0 1e-08 35.6 0.0 1.8 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF5830 - 6.2e-12 45.8 0.1 3.2e-06 27.6 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF5830 - 4e-09 36.5 0.5 1.3e-06 28.5 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF5830 - 7.4e-07 29.0 0.2 0.0026 18.1 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF5830 - 8.4e-07 29.2 2.5 0.00062 20.1 0.0 3.0 4 0 0 4 4 4 2 Ankyrin repeat RRM_1 PF00076.22 ORF5830 - 0.17 11.8 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SART-1 PF03343.13 ORF56585 - 4.2e-26 91.7 6.0 5.1e-26 91.4 6.0 1.0 1 0 0 1 1 1 1 SART-1 family Sial-lect-inser PF09264.10 ORF56585 - 0.11 12.2 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Vibrio cholerae sialidase, lectin insertion PapD_N PF00345.20 ORF52522 - 2.1e-36 124.6 1.7 3.1e-36 124.0 1.7 1.3 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 ORF52522 - 3.3e-08 33.7 2.8 5e-08 33.2 1.6 1.9 2 0 0 2 2 2 1 Pili assembly chaperone PapD, C-terminal domain KxDL PF10241.9 ORF51845 - 0.22 11.8 1.1 0.32 11.3 1.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein Glyco_transf_90 PF05686.12 ORF5035 - 1.1e-21 77.3 0.0 1.3e-21 77.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 90 MscS_porin PF12795.7 ORF49428 - 0.3 10.6 7.2 0.22 11.0 0.9 2.1 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain Tex_N PF09371.10 ORF49428 - 2.3 7.9 8.5 0.14 11.8 1.9 2.0 2 0 0 2 2 2 0 Tex-like protein N-terminal domain CLN3 PF02487.17 ORF48932 - 2.2e-13 50.0 0.1 7.6e-13 48.3 0.1 1.7 1 1 0 1 1 1 1 CLN3 protein Nucleoside_tran PF01733.18 ORF48932 - 2.5e-05 23.8 0.3 0.00035 20.1 0.3 2.0 1 1 0 1 1 1 1 Nucleoside transporter CCDC144C PF14915.6 ORF48095 - 0.023 13.8 1.0 0.032 13.3 1.0 1.1 1 0 0 1 1 1 0 CCDC144C protein coiled-coil region Syntaxin-6_N PF09177.11 ORF48095 - 0.037 14.6 0.2 0.072 13.7 0.2 1.5 1 0 0 1 1 1 0 Syntaxin 6, N-terminal GAS PF13851.6 ORF48095 - 0.068 12.5 0.9 0.096 12.0 0.9 1.3 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding DUF2475 PF10629.9 ORF465 - 3e-07 30.6 6.4 0.00019 21.6 0.6 3.5 2 2 1 3 3 3 2 Protein of unknown function (DUF2475) Ank_4 PF13637.6 ORF4564 - 3.3e-24 84.9 0.5 3.5e-09 37.0 0.0 3.5 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF4564 - 9e-22 77.5 0.4 1.5e-13 51.1 0.1 2.6 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF4564 - 4.1e-13 48.2 0.0 0.00075 19.8 0.0 4.5 4 0 0 4 4 4 2 Ankyrin repeat Ank PF00023.30 ORF4564 - 4.2e-13 49.1 0.3 0.0028 18.0 0.0 4.3 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF4564 - 1.4e-12 47.6 0.0 1.8e-07 31.3 0.0 3.4 1 1 2 3 3 3 2 Ankyrin repeats (many copies) STI1 PF17830.1 ORF4564 - 5.4e-08 32.7 0.1 0.00012 22.0 0.2 2.5 2 0 0 2 2 2 2 STI1 domain MHB PF16525.5 ORF4564 - 0.05 13.9 0.2 1.4 9.2 0.0 2.7 2 1 1 3 3 3 0 Haemophore, haem-binding DUF4581 PF15167.6 ORF4564 - 0.093 12.9 0.0 0.25 11.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4581) RRM_1 PF00076.22 ORF452 - 1.1e-07 31.5 0.0 1.8e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Patched PF02460.18 ORF43309 - 1.9e-31 109.0 12.9 2.2e-31 108.8 12.9 1.0 1 0 0 1 1 1 1 Patched family ACR_tran PF00873.19 ORF43309 - 2.7e-06 25.4 10.9 3.2e-06 25.1 10.9 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 ORF43309 - 0.29 10.0 8.8 0.36 9.7 8.8 1.2 1 0 0 1 1 1 0 MMPL family YfhO PF09586.10 ORF43309 - 1.6 6.9 12.2 2.9 6.0 0.4 2.0 2 0 0 2 2 2 0 Bacterial membrane protein YfhO HAD_2 PF13419.6 ORF43207 - 3e-37 128.4 0.0 5.3e-37 127.6 0.0 1.4 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF43207 - 5.4e-27 95.5 0.1 6.5e-27 95.2 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF43207 - 2.7e-14 54.0 0.1 1e-13 52.1 0.1 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF43207 - 1.4e-10 41.1 0.0 3.6e-10 39.8 0.0 1.7 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_3 PF08282.12 ORF43207 - 1.3e-06 28.3 0.0 0.092 12.5 0.0 3.1 3 0 0 3 3 3 3 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF43207 - 0.00029 20.9 0.0 0.036 14.2 0.0 2.4 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Acid_PPase PF12689.7 ORF43207 - 0.049 13.5 0.0 0.63 9.9 0.0 2.3 2 1 0 2 2 2 0 Acid Phosphatase Put_Phosphatase PF06888.12 ORF43207 - 0.1 12.0 0.0 3.9 6.8 0.0 2.7 3 0 0 3 3 3 0 Putative Phosphatase S6PP PF05116.13 ORF43207 - 0.14 11.6 0.0 0.55 9.7 0.0 1.8 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase zf-CCCH_2 PF14608.6 ORF38610 - 0.00061 20.2 0.9 0.00061 20.2 0.9 2.2 2 0 0 2 2 2 1 RNA-binding, Nab2-type zinc finger Methyltransf_2 PF00891.18 ORF38505 - 1.8e-17 63.3 0.0 2.2e-17 63.0 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_25 PF13649.6 ORF38505 - 2.4e-09 37.8 0.0 5.1e-09 36.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF38505 - 1.1e-07 32.4 0.0 1.9e-07 31.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF38505 - 2e-06 27.8 0.0 3e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF38505 - 1.3e-05 25.8 0.0 2.7e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF38505 - 3.8e-05 23.3 0.0 0.0044 16.6 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase small domain Ubie_methyltran PF01209.18 ORF38505 - 3.8e-05 23.1 0.0 0.00013 21.4 0.0 1.7 2 1 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 ORF38505 - 4.5e-05 23.3 0.0 0.0001 22.2 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain DUF938 PF06080.12 ORF38505 - 0.00052 19.8 0.0 0.00076 19.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF938) Methyltransf_16 PF10294.9 ORF38505 - 0.0069 16.1 0.0 0.0092 15.7 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase CMAS PF02353.20 ORF38505 - 0.0073 15.6 0.0 1.7 7.9 0.0 2.1 2 0 0 2 2 2 2 Mycolic acid cyclopropane synthetase PCMT PF01135.19 ORF38505 - 0.18 11.5 0.0 0.37 10.5 0.0 1.4 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PWI PF01480.17 ORF34871 - 1.3e-30 105.5 0.0 2.5e-30 104.6 0.0 1.5 1 0 0 1 1 1 1 PWI domain Atg14 PF10186.9 ORF34871 - 0.013 14.6 1.6 0.025 13.7 1.6 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 UPF0242 PF06785.11 ORF34871 - 2.8 8.0 7.6 0.4 10.8 2.9 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus MRI PF15325.6 ORF27342 - 0.0061 17.6 1.3 0.011 16.8 1.3 1.4 1 0 0 1 1 1 1 Modulator of retrovirus infection Epimerase PF01370.21 ORF25877 - 2.4e-10 40.3 0.0 3.7e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF25877 - 2.7e-08 33.2 0.1 4.5e-08 32.4 0.1 1.5 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 ORF25877 - 1.9e-06 27.3 0.0 3e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF25877 - 8.7e-06 25.7 0.0 1.1e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF25877 - 0.0054 15.9 0.3 0.0093 15.1 0.3 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF25877 - 0.13 12.2 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 KR domain IU_nuc_hydro PF01156.19 ORF2536 - 8e-48 163.6 0.0 9.5e-48 163.3 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase WWE PF02825.20 ORF19547 - 2e-10 41.1 0.5 3.9e-10 40.2 0.5 1.5 1 0 0 1 1 1 1 WWE domain WGR PF05406.15 ORF19547 - 9.2e-07 28.8 0.2 1.8e-06 27.9 0.2 1.5 1 0 0 1 1 1 1 WGR domain Adeno_terminal PF02459.15 ORF19547 - 0.5 8.7 3.8 0.68 8.3 3.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein ZapB PF06005.12 ORF1823 - 0.32 11.5 7.5 2.9 8.4 0.1 3.1 3 0 0 3 3 3 0 Cell division protein ZapB Ank_2 PF12796.7 ORF1704 - 1.4e-29 102.5 3.9 4.5e-15 56.0 0.1 2.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF1704 - 2e-23 82.4 1.3 2.3e-08 34.4 0.1 3.5 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF1704 - 8.1e-14 50.4 0.0 5.7e-05 23.2 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF1704 - 1.1e-13 51.0 0.3 0.0032 17.8 0.0 4.3 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF1704 - 1.3e-12 47.7 0.1 1e-08 35.2 0.1 3.3 1 1 2 3 3 3 2 Ankyrin repeats (many copies) STI1 PF17830.1 ORF1704 - 1.7e-07 31.0 2.5 6.2e-05 22.9 1.2 2.6 2 0 0 2 2 2 2 STI1 domain MHB PF16525.5 ORF1704 - 0.041 14.1 0.4 1 9.7 0.0 2.6 3 0 0 3 3 3 0 Haemophore, haem-binding Com_YlbF PF06133.11 ORF1704 - 0.4 11.3 6.4 0.99 10.0 3.1 2.6 2 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA APH PF01636.23 ORF16737 - 1.2e-05 25.3 1.3 3.9e-05 23.7 0.4 2.1 2 1 1 3 3 3 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF16737 - 2.5e-05 24.0 0.0 4.3e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 ORF16737 - 0.029 13.7 0.0 0.042 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein kinase domain Scramblase PF03803.15 ORF1541 - 2.6e-11 43.3 0.1 3.6e-11 42.8 0.1 1.1 1 0 0 1 1 1 1 Scramblase PHO4 PF01384.20 ORF13761 - 0.31 10.0 3.7 5.4 6.0 0.4 2.2 2 0 0 2 2 2 0 Phosphate transporter family Peptidase_S11 PF00768.20 ORF112037 - 3.1e-33 115.2 1.7 1.5e-18 67.1 0.2 2.1 2 0 0 2 2 2 2 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 ORF112037 - 2.6e-05 23.9 0.1 0.0028 17.3 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase enzyme family HATPase_c PF02518.26 ORF111706 - 1.5e-17 64.1 0.0 2.5e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF111706 - 1.7e-12 47.1 1.6 1.7e-12 47.1 1.6 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 ORF111706 - 0.023 14.6 0.3 0.51 10.3 0.3 2.2 1 1 0 1 1 1 0 GHKL domain DUF948 PF06103.11 ORF110979 - 2.1 8.7 8.1 0.75 10.1 1.8 2.9 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF1129 PF06570.11 ORF110979 - 3.2 7.2 4.4 0.46 9.9 0.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) DUF763 PF05559.11 ORF109887 - 0.019 14.1 0.5 0.29 10.3 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF763) Spore_II_R PF09551.10 ORF109887 - 0.032 14.7 0.3 0.061 13.8 0.3 1.4 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) PAH PF02671.21 ORF109887 - 0.06 13.5 0.0 0.27 11.4 0.0 2.0 1 1 0 1 1 1 0 Paired amphipathic helix repeat PrkA PF06798.12 ORF109887 - 0.13 11.9 2.7 2 8.0 0.7 2.2 1 1 1 2 2 2 0 PrkA serine protein kinase C-terminal domain DUF4355 PF14265.6 ORF109887 - 0.34 11.1 3.1 3.3 8.0 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4355) HTH_6 PF01418.17 ORF109100 - 0.12 12.3 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family SBF PF01758.16 ORF108552 - 0.04 13.6 0.1 0.063 12.9 0.1 1.3 1 0 0 1 1 1 0 Sodium Bile acid symporter family ATP_bind_1 PF03029.17 ORF108258 - 8.3e-48 163.3 0.0 1.1e-47 162.8 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 ORF108258 - 4.4e-05 23.1 0.0 9.2e-05 22.1 0.0 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF108258 - 0.00037 20.1 0.0 0.00063 19.3 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B DUF3450 PF11932.8 ORF108258 - 0.014 14.7 0.1 0.086 12.1 0.0 2.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) MAAL_C PF07476.11 ORF108258 - 0.018 14.2 0.0 0.026 13.7 0.0 1.1 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Bromo_TP PF07524.13 ORF108258 - 0.029 14.4 0.4 0.24 11.4 0.0 2.4 2 1 1 3 3 3 0 Bromodomain associated MMR_HSR1 PF01926.23 ORF108258 - 0.06 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase FlaC_arch PF05377.11 ORF108258 - 0.074 13.5 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) RsgA_GTPase PF03193.16 ORF108258 - 0.15 12.0 0.0 0.7 9.8 0.0 2.0 2 0 0 2 2 2 0 RsgA GTPase Nsp1_C PF05064.13 ORF108258 - 0.33 10.8 0.9 1 9.2 0.3 2.1 3 0 0 3 3 3 0 Nsp1-like C-terminal region 2OG-FeII_Oxy_5 PF13759.6 ORF105455 - 1.7e-14 54.0 0.0 3.4e-14 53.1 0.0 1.5 1 1 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy_3 PF13640.6 ORF105455 - 0.039 14.9 0.1 0.076 13.9 0.1 1.9 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily RNA_pol PF00940.19 ORF102209 - 0.049 12.5 0.5 0.059 12.2 0.5 1.1 1 0 0 1 1 1 0 DNA-dependent RNA polymerase TFIIA PF03153.13 ORF102209 - 0.13 12.2 15.1 0.16 11.9 15.1 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF702 PF05142.12 ORF102209 - 0.15 12.6 4.7 0.052 14.0 1.9 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF702) SF-assemblin PF06705.11 ORF102209 - 0.9 8.8 5.0 0.29 10.4 0.8 2.0 2 0 0 2 2 2 0 SF-assemblin/beta giardin Ndc1_Nup PF09531.10 ORF102209 - 1.4 7.5 5.4 1.5 7.5 5.4 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup GREB1 PF15782.5 ORF102209 - 1.9 5.5 8.5 2.1 5.4 8.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Apolipoprotein PF01442.18 ORF102209 - 2.8 7.8 17.8 19 5.1 17.8 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain PDZ_6 PF17820.1 ORF101375 - 0.037 13.9 0.1 0.62 10.0 0.0 2.3 2 0 0 2 2 2 0 PDZ domain DUF2649 PF10854.8 NODE_28788_length_751_cov_158.097765_g22684_i0forward_frame_1 - 1.6 9.1 8.4 1 9.7 0.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2649) Asp PF00026.23 NODE_28765_length_751_cov_2010.794693_g22666_i0forward_frame_1 - 5.8e-10 39.1 0.0 7.9e-10 38.6 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp PF00026.23 NODE_28762_length_751_cov_2049.688547_g22663_i0reverse_frame_1 - 9.7e-10 38.4 0.0 1.3e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease PhoLip_ATPase_C PF16212.5 NODE_28762_length_751_cov_2049.688547_g22663_i0reverse_frame_1 - 0.056 13.2 2.1 0.051 13.3 0.6 1.6 1 1 0 2 2 2 0 Phospholipid-translocating P-type ATPase C-terminal MH1 PF03165.16 NODE_28755_length_752_cov_1.714086_g22658_i0forward_frame_1 - 0.067 13.4 0.5 0.12 12.7 0.5 1.3 1 0 0 1 1 1 0 MH1 domain ETRAMP PF09716.10 NODE_28754_length_752_cov_2.832636_g22657_i0reverse_frame_1 - 0.57 10.3 3.0 0.57 10.3 1.2 1.8 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) FKBP_C PF00254.28 NODE_28751_length_752_cov_3.948396_g22654_i0forward_frame_1 - 0.01 16.2 1.0 0.027 14.8 0.8 1.9 2 1 0 2 2 2 0 FKBP-type peptidyl-prolyl cis-trans isomerase Mitofilin PF09731.9 NODE_28751_length_752_cov_3.948396_g22654_i0forward_frame_1 - 0.047 12.6 8.2 0.056 12.3 8.2 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein LRR_adjacent PF08191.11 NODE_28749_length_752_cov_77.912134_g22652_i0reverse_frame_1 - 0.04 14.1 0.2 4.2 7.7 0.0 2.4 2 0 0 2 2 2 0 LRR adjacent DUF4223 PF13978.6 NODE_28733_length_752_cov_214.029289_g22638_i0reverse_frame_1 - 0.05 13.6 0.3 4.3 7.4 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4223) ABC_membrane PF00664.23 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 4.1e-20 72.6 2.9 4.9e-20 72.3 2.9 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 1.7e-10 41.5 0.0 3.4e-10 40.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.00023 20.8 0.0 0.00048 19.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.00066 19.5 0.1 0.0015 18.3 0.0 1.6 2 0 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.0019 18.6 0.0 0.0039 17.6 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.002 18.4 0.0 0.0043 17.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF87 PF01935.17 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.0031 17.6 0.0 0.0054 16.9 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain G-alpha PF00503.20 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.0043 16.3 0.0 0.0081 15.3 0.0 1.4 1 0 0 1 1 1 1 G-protein alpha subunit FtsK_SpoIIIE PF01580.18 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.016 14.6 0.0 0.028 13.8 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_7 PF12775.7 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.025 14.1 0.0 0.049 13.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.043 13.7 0.0 0.074 13.0 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.065 13.2 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_21 PF13304.6 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.075 12.8 0.0 0.34 10.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.082 13.4 0.0 0.4 11.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_1 - 0.15 11.2 0.0 0.25 10.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) ABC_membrane PF00664.23 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 1.1e-20 74.4 2.1 1.3e-20 74.2 2.1 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 1.8e-10 41.5 0.0 3.4e-10 40.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.00023 20.8 0.0 0.00048 19.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.00066 19.5 0.1 0.0015 18.3 0.0 1.6 2 0 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.002 18.6 0.0 0.0039 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.002 18.4 0.0 0.0043 17.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF87 PF01935.17 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.0031 17.6 0.0 0.0054 16.9 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain G-alpha PF00503.20 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.0041 16.3 0.0 0.0081 15.3 0.0 1.4 2 0 0 2 2 2 1 G-protein alpha subunit FtsK_SpoIIIE PF01580.18 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.016 14.6 0.0 0.028 13.8 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_7 PF12775.7 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.025 14.1 0.0 0.049 13.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.043 13.7 0.0 0.074 13.0 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.067 13.2 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_21 PF13304.6 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.076 12.8 0.0 0.34 10.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.083 13.4 0.0 0.4 11.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_1 - 0.15 11.2 0.0 0.25 10.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DNA_ligase_ZBD PF03119.16 NODE_28715_length_753_cov_2.231198_g22623_i0reverse_frame_1 - 0.01 15.8 0.3 0.018 15.1 0.3 1.4 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Cyclin_N PF00134.23 NODE_28713_length_753_cov_2.658774_g22621_i0reverse_frame_1 - 1.8e-09 37.4 0.4 3.1e-09 36.7 0.4 1.4 1 0 0 1 1 1 1 Cyclin, N-terminal domain RE_HaeIII PF09556.10 NODE_28713_length_753_cov_2.658774_g22621_i0reverse_frame_1 - 0.04 13.0 0.0 0.053 12.6 0.0 1.2 1 0 0 1 1 1 0 HaeIII restriction endonuclease PMR5N PF14416.6 NODE_28712_length_753_cov_2.961003_g22620_i0reverse_frame_1 - 0.051 13.9 1.6 0.12 12.7 1.6 1.7 1 0 0 1 1 1 0 PMR5 N terminal Domain PriA_3primeBD PF17764.1 NODE_28707_length_753_cov_4.703343_g22615_i0forward_frame_1 - 2.2e-32 110.8 0.0 4.8e-32 109.7 0.0 1.6 2 0 0 2 2 2 1 3′ DNA-binding domain (3′BD) Gp45_2 PF17470.2 NODE_28665_length_754_cov_90.016690_g22579_i0forward_frame_3 - 0.079 12.9 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Phage gene product 45.2 Nrap_D2 PF17403.2 NODE_28665_length_754_cov_90.016690_g22579_i0forward_frame_2 - 0.014 15.1 0.1 0.022 14.5 0.1 1.3 1 0 0 1 1 1 0 Nrap protein PAP/OAS-like domain GyrB_insert PF18053.1 NODE_28662_length_754_cov_97.043115_g22576_i0reverse_frame_3 - 0.052 13.4 0.2 0.1 12.5 0.2 1.5 1 1 0 1 1 1 0 DNA gyrase B subunit insert domain DUF645 PF04875.12 NODE_28662_length_754_cov_97.043115_g22576_i0forward_frame_2 - 0.037 14.1 0.2 0.076 13.1 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF645 DNA_binding_2 PF13724.6 NODE_28660_length_754_cov_109.328234_g22574_i0reverse_frame_3 - 0.0093 16.3 0.0 0.017 15.5 0.0 1.4 1 0 0 1 1 1 1 DNA-binding domain ANTH PF07651.16 NODE_28647_length_754_cov_202.955494_g22564_i0reverse_frame_2 - 0.14 11.1 0.0 0.21 10.6 0.0 1.2 1 0 0 1 1 1 0 ANTH domain Shisa PF13908.6 NODE_28603_length_755_cov_312.113889_g22526_i0reverse_frame_2 - 0.041 14.1 0.0 0.059 13.6 0.0 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator HCV_NS2 PF01538.18 NODE_28603_length_755_cov_312.113889_g22526_i0forward_frame_2 - 0.067 12.8 0.1 0.095 12.4 0.1 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 UPF0086 PF01868.16 NODE_28600_length_755_cov_464.623611_g22524_i0reverse_frame_3 - 0.077 12.9 2.4 0.061 13.3 1.0 1.6 2 0 0 2 2 2 0 Domain of unknown function UPF0086 MARCKS PF02063.17 NODE_28561_length_756_cov_151.948682_g22489_i0reverse_frame_2 - 1.3 8.9 10.7 2.1 8.3 10.7 1.2 1 0 0 1 1 1 0 MARCKS family A_deaminase PF00962.22 ORF9782 - 5e-39 134.5 0.0 6.5e-39 134.2 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.11 ORF9782 - 0.036 13.5 0.2 0.096 12.1 0.2 1.6 2 0 0 2 2 2 0 Amidohydrolase family HlyD_2 PF12700.7 ORF97451 - 0.017 13.9 19.3 0.023 13.5 19.3 1.1 1 0 0 1 1 1 0 HlyD family secretion protein CCDC84 PF14968.6 ORF97451 - 0.028 14.1 7.8 0.038 13.6 7.8 1.2 1 0 0 1 1 1 0 Coiled coil protein 84 Exonuc_VII_L PF02601.15 ORF97451 - 0.062 12.9 11.7 0.09 12.3 11.7 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4407 PF14362.6 ORF97451 - 0.11 11.9 4.0 0.14 11.4 4.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF2362 PF10154.9 ORF97451 - 0.12 11.3 11.9 0.16 10.9 11.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2362) Golgin_A5 PF09787.9 ORF97451 - 0.27 10.7 19.7 0.41 10.1 19.7 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 ATP11 PF06644.11 ORF97451 - 0.56 10.0 13.3 0.75 9.5 13.3 1.2 1 0 0 1 1 1 0 ATP11 protein LMBR1 PF04791.16 ORF97451 - 0.6 9.0 5.5 0.66 8.8 5.5 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF99 PF01949.16 ORF97451 - 0.62 9.5 2.9 3.2 7.1 1.0 2.4 2 1 0 2 2 2 0 Protein of unknown function DUF99 Mit_ribos_Mrp51 PF11709.8 ORF97451 - 0.77 9.3 7.3 0.97 9.0 7.3 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit FapA PF03961.13 ORF97451 - 1.4 7.5 17.5 2 6.9 17.5 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A Vfa1 PF08432.10 ORF97451 - 1.8 8.9 16.9 2.6 8.3 16.9 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 PI_PP_I PF18363.1 ORF97451 - 1.8 8.8 6.3 2.1 8.6 4.0 2.1 2 0 0 2 2 2 0 Phosphoinositide phosphatase insertion domain HIP1_clath_bdg PF16515.5 ORF97451 - 3.4 8.3 24.0 2.4 8.8 7.9 2.8 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF883 PF05957.13 ORF97451 - 5.2 7.8 7.6 31 5.2 7.5 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) DUF5401 PF17380.2 ORF97451 - 5.5 4.9 17.1 7.4 4.5 17.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) CorA PF01544.18 ORF97451 - 7.5 5.8 10.3 5.8 6.1 8.0 1.8 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein GvpL_GvpF PF06386.11 ORF97451 - 8.7 6.2 8.5 14 5.5 8.5 1.2 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF TMEM174 PF15029.6 ORF95963 - 0.0038 17.0 0.6 0.0058 16.4 0.6 1.2 1 0 0 1 1 1 1 Transmembrane protein 174 Colicin_im PF03857.13 ORF95963 - 1.6 8.6 8.8 0.15 12.1 3.1 2.0 2 0 0 2 2 2 0 Colicin immunity protein MMPL PF03176.15 ORF93230 - 4.3e-30 104.8 11.9 1.7e-26 93.0 0.7 2.0 2 0 0 2 2 2 2 MMPL family DUF3899 PF13038.6 ORF93230 - 0.26 11.8 2.9 6.6 7.3 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) TMEM154 PF15102.6 ORF91044 - 0.00053 19.9 6.5 0.00075 19.4 6.1 1.5 1 1 0 1 1 1 1 TMEM154 protein family Shisa PF13908.6 ORF91044 - 0.0018 18.6 0.8 0.0033 17.7 0.8 1.5 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator EssA PF10661.9 ORF91044 - 0.026 14.4 1.7 0.044 13.6 1.7 1.3 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA MIG-14_Wnt-bd PF06664.12 ORF91044 - 0.031 13.5 3.2 1 8.5 0.1 2.2 2 0 0 2 2 2 0 Wnt-binding factor required for Wnt secretion Orf78 PF06024.12 ORF91044 - 0.04 14.2 0.2 0.088 13.1 0.2 1.6 1 0 0 1 1 1 0 Orf78 (ac78) ISK_Channel PF02060.15 ORF91044 - 0.081 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Slow voltage-gated potassium channel DUF5383 PF17355.2 ORF91044 - 0.084 13.2 0.1 0.17 12.2 0.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5383) EphA2_TM PF14575.6 ORF91044 - 0.091 13.7 0.1 0.39 11.6 0.0 2.0 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Alpha_GJ PF03229.13 ORF91044 - 0.11 13.0 5.4 0.34 11.5 5.4 1.8 1 1 0 1 1 1 0 Alphavirus glycoprotein J AJAP1_PANP_C PF15298.6 ORF91044 - 0.27 11.4 11.7 0.43 10.8 11.7 1.3 1 0 0 1 1 1 0 AJAP1/PANP C-terminus ECSCR PF15820.5 ORF91044 - 1.7 8.5 9.2 0.62 9.9 3.7 2.3 1 1 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator Podoplanin PF05808.11 ORF91044 - 3.5 7.7 14.7 6.6 6.8 14.7 1.5 1 1 0 1 1 1 0 Podoplanin Asp PF00026.23 ORF90316 - 2.5e-30 106.0 0.6 3.1e-30 105.7 0.6 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF90316 - 0.0062 16.3 0.0 0.015 15.1 0.0 1.7 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal 2OG-FeII_Oxy PF03171.20 ORF87908 - 0.0011 19.4 0.0 0.0021 18.5 0.0 1.5 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily YfhE PF14152.6 ORF87908 - 0.79 9.8 0.0 0.79 9.8 0.0 2.3 2 0 0 2 2 2 0 YfhE-like protein zf-RanBP PF00641.18 ORF83701 - 2e-10 39.8 4.8 5.1e-10 38.5 4.8 1.7 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others OB_NTP_bind PF07717.16 ORF83701 - 0.0042 17.4 0.0 0.0098 16.2 0.0 1.6 1 1 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Tub PF01167.18 ORF79684 - 1.4e-59 201.8 2.4 1.6e-59 201.6 2.4 1.0 1 0 0 1 1 1 1 Tub family YqbF PF14553.6 ORF79684 - 0.019 14.8 0.3 0.04 13.8 0.3 1.5 1 0 0 1 1 1 0 YqbF, hypothetical protein domain YpsA PF06908.11 ORF79684 - 0.029 14.4 2.8 0.031 14.3 0.4 2.0 2 0 0 2 2 2 0 YspA SLOG family DUF3953 PF13129.6 ORF69524 - 0.02 14.6 0.9 0.051 13.3 0.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3953) KH_1 PF00013.29 ORF68284 - 0.0047 16.7 0.1 0.19 11.6 0.0 2.4 2 0 0 2 2 2 2 KH domain DUF3449 PF11931.8 ORF64991 - 4.2e-22 78.8 2.8 5.7e-22 78.4 0.0 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF3449) SF3A3 PF16837.5 ORF64991 - 6.9e-12 45.7 2.5 7.8e-12 45.6 1.1 1.8 2 0 0 2 2 2 1 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 zf-C2H2_3rep PF18868.1 ORF64991 - 0.00085 20.0 2.0 0.00097 19.8 1.0 1.6 1 1 1 2 2 2 1 Zinc finger C2H2-type, 3 repeats zf-C2H2_jaz PF12171.8 ORF64991 - 0.0038 17.5 12.0 0.0065 16.7 6.4 2.9 3 0 0 3 3 3 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF64991 - 0.0078 16.6 8.8 0.062 13.7 4.8 3.3 3 0 0 3 3 3 1 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF64991 - 0.012 16.0 6.3 0.061 13.7 6.3 2.2 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) DUF3802 PF12290.8 ORF64991 - 0.026 15.0 0.6 0.052 14.1 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3802) Lzipper-MIP1 PF14389.6 ORF64991 - 0.041 14.2 0.2 0.082 13.2 0.2 1.5 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 EF-hand_6 PF13405.6 ORF6279 - 8.9e-07 28.4 0.3 0.063 13.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF6279 - 0.00025 21.5 0.1 0.00065 20.1 0.1 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF6279 - 0.00097 18.5 0.2 0.13 11.8 0.1 2.6 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF6279 - 0.025 14.1 3.2 1.9 8.1 0.4 3.1 3 0 0 3 3 3 0 EF hand Wtap PF17098.5 ORF6279 - 0.025 14.5 0.4 0.056 13.4 0.1 1.6 2 0 0 2 2 2 0 WTAP/Mum2p family EF-hand_8 PF13833.6 ORF6279 - 0.06 13.2 0.1 8 6.4 0.1 2.4 2 0 0 2 2 2 0 EF-hand domain pair DUF1980 PF09323.10 ORF60819 - 0.31 10.9 2.6 0.55 10.1 2.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) RNA_pol_Rpb1_4 PF05000.17 ORF60819 - 0.65 10.0 5.6 0.2 11.6 0.4 2.4 2 1 0 2 2 2 0 RNA polymerase Rpb1, domain 4 MitMem_reg PF13012.6 ORF59153 - 2.3e-30 105.3 0.1 3.6e-30 104.7 0.1 1.3 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 ORF59153 - 1.9e-08 34.3 3.1 5.6e-08 32.8 0.0 2.5 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease AAA_23 PF13476.6 ORF59153 - 0.005 17.4 7.2 0.0061 17.1 7.2 1.2 1 0 0 1 1 1 1 AAA domain Phyto_Pns9_10 PF05878.11 ORF59153 - 0.0056 15.9 0.9 0.52 9.4 0.2 2.1 1 1 1 2 2 2 2 Phytoreovirus nonstructural protein Pns9/Pns10 DUF1682 PF07946.14 ORF59153 - 0.015 14.5 5.7 0.021 14.1 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) FYDLN_acid PF09538.10 ORF59153 - 0.019 15.6 6.0 5.7 7.7 6.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) MscS_TM PF12794.7 ORF59153 - 0.1 11.4 0.4 0.14 10.9 0.4 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Ion_trans PF00520.31 ORF57561 - 4.8e-10 39.1 9.7 6.2e-10 38.7 9.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF57561 - 0.0086 15.9 0.0 0.019 14.9 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF57561 - 0.06 12.9 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 EF hand BCIP PF13862.6 ORF57561 - 0.08 12.7 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 p21-C-terminal region-binding protein DUF3671 PF12420.8 ORF57561 - 1.3 9.1 5.9 6.6 6.8 5.9 2.1 1 1 0 1 1 1 0 Protein of unknown function Sec16 PF12932.7 ORF56642 - 0.084 13.5 0.1 0.18 12.4 0.0 1.5 1 1 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region DUF4407 PF14362.6 ORF56642 - 0.4 10.0 1.0 0.74 9.1 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Toxin_15 PF07906.13 ORF56483 - 0.0016 18.1 2.7 0.0031 17.2 0.2 2.0 2 0 0 2 2 2 1 ShET2 enterotoxin, N-terminal region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks70.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks70.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks70.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks70.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Exo_endo_phos PF03372.23 ORF55207 - 1.1e-05 25.0 0.0 2.5e-05 23.9 0.0 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Homeodomain PF00046.29 ORF54273 - 1.2e-07 31.4 4.8 2.2e-07 30.6 4.8 1.4 1 0 0 1 1 1 1 Homeodomain Rad50_zn_hook PF04423.14 ORF54273 - 0.073 12.9 0.3 0.073 12.9 0.3 2.6 2 0 0 2 2 2 0 Rad50 zinc hook motif DAO PF01266.24 ORF52629 - 5.9e-20 72.1 0.0 7.8e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF52629 - 5.2e-06 25.9 0.0 0.079 12.2 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF52629 - 0.00019 20.8 0.0 0.00032 20.0 0.0 1.4 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 ORF52629 - 0.0013 17.9 0.4 0.013 14.6 0.2 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 ORF52629 - 0.0028 16.8 0.0 0.0047 16.1 0.0 1.4 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 ORF52629 - 0.0034 17.6 0.0 0.0067 16.6 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 ORF52629 - 0.006 16.0 0.0 0.0096 15.3 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 ORF52629 - 0.03 13.0 0.1 0.59 8.8 0.1 2.1 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox_3 PF13738.6 ORF52629 - 0.039 13.2 0.2 4.6 6.4 0.0 2.5 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 ORF52629 - 0.047 13.3 0.0 0.1 12.1 0.0 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.21 ORF52629 - 0.068 12.5 0.0 0.16 11.3 0.0 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain GDI PF00996.18 ORF52629 - 0.074 11.6 0.2 0.14 10.6 0.0 1.6 2 0 0 2 2 2 0 GDP dissociation inhibitor Pyr_redox PF00070.27 ORF52629 - 0.089 13.4 0.3 0.46 11.1 0.2 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 ORF52629 - 0.1 12.5 0.0 0.2 11.6 0.0 1.6 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 ORF52629 - 0.12 11.4 0.0 0.66 9.0 0.0 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein NADPH_Ox PF08414.10 ORF52629 - 0.17 12.3 0.0 1.9 8.9 0.0 2.1 2 0 0 2 2 2 0 Respiratory burst NADPH oxidase CN_hydrolase PF00795.22 ORF47604 - 2.5e-24 86.0 0.1 8.8e-24 84.2 0.1 1.7 1 1 0 1 1 1 1 Carbon-nitrogen hydrolase Ank_2 PF12796.7 ORF47422 - 2.8e-47 159.2 5.2 8.1e-17 61.6 0.5 4.0 1 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF47422 - 1.4e-37 127.6 2.3 1.1e-10 41.8 0.1 4.6 3 1 2 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF47422 - 9.4e-37 124.6 21.0 7.3e-10 38.9 0.2 6.6 1 1 6 7 7 7 7 Ankyrin repeats (many copies) Ank PF00023.30 ORF47422 - 1.1e-30 104.7 5.5 0.0007 19.9 0.0 7.1 6 1 1 7 7 7 7 Ankyrin repeat Ank_3 PF13606.6 ORF47422 - 3.4e-24 82.3 1.5 0.0029 18.0 0.0 7.2 7 0 0 7 7 7 7 Ankyrin repeat Prominin PF05478.11 ORF47334 - 0.066 11.2 0.3 4.7 5.0 0.0 2.1 2 0 0 2 2 2 0 Prominin DUF5113 PF17140.4 ORF47334 - 0.2 11.4 0.7 1.8 8.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5113) Cdc6_C PF09079.11 ORF45370 - 9e-08 32.0 0.1 4.8e-07 29.7 0.0 2.1 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain TMV_coat PF00721.21 ORF45370 - 0.013 15.3 0.1 0.03 14.2 0.0 1.6 2 0 0 2 2 2 0 Virus coat protein (TMV like) Rep_3 PF01051.21 ORF45054 - 4.3e-48 164.0 0.0 4.9e-48 163.9 0.0 1.0 1 0 0 1 1 1 1 Initiator Replication protein Lip_A_acyltrans PF03279.13 ORF45054 - 0.02 14.0 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial lipid A biosynthesis acyltransferase DUF1298 PF06974.13 ORF40883 - 1.7e-16 60.4 0.1 3.2e-16 59.6 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) 14-3-3 PF00244.20 ORF37592 - 4.7e-96 320.6 6.9 5.4e-96 320.4 6.9 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF37592 - 0.018 15.1 0.2 0.049 13.6 0.2 1.8 1 0 0 1 1 1 0 Flagellar protein FlaF Ubie_methyltran PF01209.18 ORF3463 - 4.5e-113 376.3 0.0 5.1e-113 376.1 0.0 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 ORF3463 - 7.5e-25 87.5 0.0 1.6e-24 86.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF3463 - 9.1e-23 80.7 0.0 2e-22 79.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF3463 - 6.1e-20 71.5 0.0 9.5e-20 70.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF3463 - 2e-17 63.5 0.0 2.7e-17 63.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF3463 - 9.5e-14 51.9 0.0 1.9e-13 51.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF3463 - 1.5e-06 28.2 0.0 2.3e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 ORF3463 - 0.0001 22.1 0.0 0.00019 21.2 0.0 1.5 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 ORF3463 - 0.00056 19.5 0.0 0.0011 18.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.15 ORF3463 - 0.012 15.5 0.1 0.025 14.4 0.0 1.6 2 0 0 2 2 2 0 Hypothetical methyltransferase Methyltr_RsmB-F PF01189.17 ORF3463 - 0.018 14.7 0.0 0.06 13.0 0.0 1.8 3 0 0 3 3 3 0 16S rRNA methyltransferase RsmB/F GCD14 PF08704.10 ORF3463 - 0.036 13.7 0.0 0.14 11.8 0.0 1.8 1 1 1 2 2 2 0 tRNA methyltransferase complex GCD14 subunit Rsm22 PF09243.10 ORF3463 - 0.041 13.2 0.0 0.057 12.7 0.0 1.3 1 1 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 RrnaAD PF00398.20 ORF3463 - 0.042 12.9 0.0 0.061 12.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase MetW PF07021.12 ORF3463 - 0.047 13.3 0.0 0.089 12.4 0.0 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_15 PF09445.10 ORF3463 - 0.081 12.5 0.0 0.24 10.9 0.0 1.7 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase Spo7 PF03907.13 ORF33721 - 2.4 7.6 7.5 2.6 7.4 6.1 1.7 2 0 0 2 2 2 0 Spo7-like protein ELO PF01151.18 ORF32472 - 1.1e-47 162.6 11.0 1.2e-47 162.6 11.0 1.0 1 0 0 1 1 1 1 GNS1/SUR4 family PapD_N PF00345.20 ORF32029 - 7.5e-05 22.6 0.0 0.00014 21.7 0.0 1.5 1 1 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain DEAD PF00270.29 ORF28538 - 8.7e-08 32.1 0.0 1.6e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase MaoC_dehydratas PF01575.19 ORF28538 - 8.8e-05 22.1 0.0 0.00013 21.5 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 ORF28538 - 0.037 14.2 0.3 0.12 12.5 0.3 1.7 1 1 0 1 1 1 0 N-terminal half of MaoC dehydratase PrcB_C PF14343.6 ORF28538 - 0.069 13.3 0.1 0.14 12.3 0.1 1.5 1 0 0 1 1 1 0 PrcB C-terminal HEAT_EZ PF13513.6 ORF24108 - 0.045 14.3 0.1 0.11 13.0 0.1 1.7 1 0 0 1 1 1 0 HEAT-like repeat RST PF12174.8 ORF23597 - 0.0024 17.8 0.1 3.5 7.6 0.0 2.5 2 0 0 2 2 2 2 RCD1-SRO-TAF4 (RST) plant domain DUF5580 PF17743.1 ORF23597 - 0.0099 14.5 0.1 0.048 12.2 0.0 1.7 1 1 1 2 2 2 2 Family of unknown function (DUF5580) DUF4887 PF16228.5 ORF23138 - 0.028 14.6 16.9 0.043 14.0 16.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4887) DUF2992 PF11208.8 ORF23138 - 0.12 12.6 14.9 0.18 12.0 14.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) SMYLE_N PF18615.1 ORF23138 - 0.21 11.1 7.8 0.26 10.8 7.8 1.1 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain Rrn6 PF10214.9 ORF23138 - 0.66 8.4 9.9 0.77 8.2 9.9 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor EMC3_TMCO1 PF01956.16 ORF23138 - 1.5 8.5 7.0 2.7 7.7 7.0 1.4 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like RR_TM4-6 PF06459.12 ORF23138 - 1.6 8.5 11.9 2 8.2 11.9 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF4746 PF15928.5 ORF23138 - 2.1 7.7 8.1 2.9 7.3 8.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) PAT1 PF09770.9 ORF23138 - 3.1 6.0 14.1 3.6 5.7 14.1 1.1 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Borrelia_P83 PF05262.11 ORF23138 - 4.2 5.7 13.4 5.5 5.4 13.4 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF3523 PF12037.8 ORF23138 - 5.8 6.2 24.7 9.4 5.5 24.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) TFIIA PF03153.13 ORF23138 - 6.7 6.6 17.2 8.9 6.2 17.2 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF2828 PF11443.8 ORF23138 - 7.5 4.5 11.0 9.2 4.2 11.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) DnaJ PF00226.31 ORF21528 - 1.7e-17 63.3 0.1 3.7e-17 62.2 0.1 1.6 1 0 0 1 1 1 1 DnaJ domain Rubis-subs-bind PF09273.11 ORF20892 - 1.7e-06 28.8 3.1 4.6e-06 27.3 0.4 2.4 1 1 2 3 3 3 1 Rubisco LSMT substrate-binding SET PF00856.28 ORF20892 - 4.8e-05 23.8 0.0 9.5e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 SET domain Exo_endo_phos PF03372.23 ORF19453 - 0.044 13.3 0.0 0.073 12.6 0.0 1.6 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family 14-3-3 PF00244.20 ORF17255 - 4.7e-96 320.6 6.9 5.4e-96 320.4 6.9 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF17255 - 0.018 15.1 0.2 0.049 13.6 0.2 1.8 1 0 0 1 1 1 0 Flagellar protein FlaF 14-3-3 PF00244.20 ORF16255 - 4.7e-96 320.6 6.9 5.4e-96 320.4 6.9 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF16255 - 0.02 14.9 0.1 0.058 13.4 0.1 1.8 1 0 0 1 1 1 0 Flagellar protein FlaF CLP_protease PF00574.23 ORF15217 - 1.5e-44 152.1 0.0 1.8e-44 151.8 0.0 1.0 1 0 0 1 1 1 1 Clp protease NIF PF03031.18 ORF14012 - 8.1e-50 168.6 0.2 1.1e-49 168.2 0.2 1.2 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Sulfatase PF00884.23 ORF13053 - 0.028 13.8 0.0 0.044 13.2 0.0 1.3 1 0 0 1 1 1 0 Sulfatase Sulfatase_C PF14707.6 ORF13053 - 0.047 14.4 0.0 0.073 13.8 0.0 1.3 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase ThiF PF00899.21 ORF11889 - 4.8e-66 222.6 0.0 6e-66 222.3 0.0 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 ORF11889 - 0.00013 22.2 0.1 0.00037 20.8 0.1 1.7 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 ORF11889 - 0.00022 21.6 0.0 0.00038 20.9 0.0 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 ORF11889 - 0.04 14.0 0.1 0.47 10.5 0.0 2.1 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 ORF11889 - 0.073 12.4 0.1 0.89 8.9 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 ORF11889 - 0.088 12.4 0.1 0.2 11.2 0.1 1.7 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF11889 - 0.1 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 ORF11889 - 0.11 11.7 0.3 0.16 11.2 0.3 1.2 1 0 0 1 1 1 0 FAD binding domain LAG1-DNAbind PF09271.11 ORF111264 - 2.3 8.8 7.8 0.13 12.9 2.2 1.8 2 1 0 2 2 2 0 LAG1, DNA binding Homeodomain PF00046.29 ORF110226 - 1.2e-07 31.4 4.8 2.2e-07 30.6 4.8 1.4 1 0 0 1 1 1 1 Homeodomain Rad50_zn_hook PF04423.14 ORF110226 - 0.073 12.9 0.3 0.073 12.9 0.3 2.6 2 0 0 2 2 2 0 Rad50 zinc hook motif MitMem_reg PF13012.6 ORF106741 - 2.3e-30 105.3 0.1 3.6e-30 104.7 0.1 1.3 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 ORF106741 - 1.9e-08 34.3 3.1 5.6e-08 32.8 0.0 2.5 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease AAA_23 PF13476.6 ORF106741 - 0.005 17.4 7.2 0.0061 17.1 7.2 1.2 1 0 0 1 1 1 1 AAA domain Phyto_Pns9_10 PF05878.11 ORF106741 - 0.0056 15.9 0.9 0.52 9.4 0.2 2.1 1 1 1 2 2 2 2 Phytoreovirus nonstructural protein Pns9/Pns10 DUF1682 PF07946.14 ORF106741 - 0.015 14.5 5.7 0.021 14.1 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) FYDLN_acid PF09538.10 ORF106741 - 0.019 15.6 6.0 5.7 7.7 6.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) MscS_TM PF12794.7 ORF106741 - 0.1 11.4 0.4 0.14 10.9 0.4 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Jnk-SapK_ap_N PF09744.9 ORF103935 - 0.077 13.2 14.0 0.12 12.6 14.0 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF848 PF05852.11 ORF103935 - 0.086 13.0 4.7 0.18 11.9 4.7 1.6 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) DUF1664 PF07889.12 ORF103935 - 0.11 12.5 1.6 0.2 11.7 1.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) YlqD PF11068.8 ORF103935 - 0.44 10.9 8.4 0.62 10.4 8.4 1.2 1 0 0 1 1 1 0 YlqD protein TMPIT PF07851.13 ORF103935 - 1.9 7.7 6.6 2.5 7.3 6.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein IFP_35_N PF07334.13 ORF103935 - 4.7 7.3 8.7 16 5.6 0.4 2.7 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Kelch_6 PF13964.6 ORF102862 - 0.00027 21.1 1.7 1.6 9.1 0.1 3.7 2 1 1 3 3 3 2 Kelch motif Kelch_4 PF13418.6 ORF102862 - 0.012 15.6 1.7 5.6 7.1 0.0 3.3 3 0 0 3 3 3 0 Galactose oxidase, central domain Beta-lactamase PF00144.24 ORF100024 - 1.4e-15 57.4 0.5 1.7e-15 57.1 0.5 1.2 1 0 0 1 1 1 1 Beta-lactamase MFS_2 PF13347.6 NODE_28937_length_748_cov_3.426367_g22821_i0forward_frame_1 - 4e-51 173.9 13.3 4.7e-51 173.7 13.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF1077 PF06417.12 NODE_28937_length_748_cov_3.426367_g22821_i0forward_frame_1 - 0.17 11.9 1.5 7.6 6.6 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1077) MscL PF01741.18 NODE_28937_length_748_cov_3.426367_g22821_i0forward_frame_1 - 1.2 9.5 6.4 0.78 10.0 0.1 2.6 1 1 1 2 2 2 0 Large-conductance mechanosensitive channel, MscL OapA_N PF08525.11 NODE_28935_length_748_cov_5.869565_g22819_i0reverse_frame_1 - 0.99 9.4 2.9 4.1 7.5 0.1 2.3 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif tRNA_U5-meth_tr PF05958.11 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 3.8e-16 59.0 0.1 5.6e-15 55.2 0.1 2.1 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Cons_hypoth95 PF03602.15 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 0.00024 20.8 0.0 0.00039 20.1 0.0 1.4 1 1 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 0.0037 17.9 0.0 0.016 15.9 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 0.0037 16.7 0.0 0.0053 16.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 0.0043 16.9 0.1 0.0069 16.2 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 0.022 14.3 0.0 0.035 13.7 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase PCMT PF01135.19 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 0.027 14.2 0.0 0.036 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 0.047 13.2 0.0 0.065 12.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain DOT1 PF08123.13 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 0.072 12.6 0.1 0.099 12.2 0.1 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 RrnaAD PF00398.20 NODE_28796_length_751_cov_104.277933_g22692_i0reverse_frame_2 - 0.078 12.0 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DUF4867 PF16161.5 NODE_28796_length_751_cov_104.277933_g22692_i0forward_frame_3 - 0.013 15.0 0.1 0.021 14.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4867) Nucleoporin_FG2 PF15967.5 NODE_28788_length_751_cov_158.097765_g22684_i0reverse_frame_3 - 0.34 9.4 0.3 0.47 8.9 0.3 1.1 1 0 0 1 1 1 0 Nucleoporin FG repeated region Gb3_synth PF04572.12 NODE_28762_length_751_cov_2049.688547_g22663_i0reverse_frame_3 - 0.35 11.0 3.9 3.9 7.7 0.3 2.2 2 0 0 2 2 2 0 Alpha 1,4-glycosyltransferase conserved region DHHC PF01529.20 NODE_28755_length_752_cov_1.714086_g22658_i0reverse_frame_2 - 3.7e-05 23.9 9.2 3.7e-05 23.9 9.2 2.7 1 1 0 2 2 2 1 DHHC palmitoyltransferase Zn_peptidase_2 PF04298.12 NODE_28755_length_752_cov_1.714086_g22658_i0reverse_frame_2 - 0.63 9.4 4.3 0.97 8.8 4.3 1.3 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase DUF2417 PF10329.9 NODE_28754_length_752_cov_2.832636_g22657_i0reverse_frame_2 - 0.056 12.9 0.1 0.08 12.3 0.1 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Sigma_reg_N PF13800.6 NODE_28754_length_752_cov_2.832636_g22657_i0forward_frame_3 - 3.1 8.2 5.8 8.4 6.8 0.1 3.4 4 0 0 4 4 4 0 Sigma factor regulator N-terminal Ion_trans PF00520.31 NODE_28751_length_752_cov_3.948396_g22654_i0forward_frame_2 - 0.42 9.8 3.2 0.65 9.2 3.2 1.2 1 0 0 1 1 1 0 Ion transport protein RnlB_antitoxin PF15933.5 NODE_28749_length_752_cov_77.912134_g22652_i0reverse_frame_3 - 0.005 17.1 1.4 0.013 15.8 1.4 1.7 1 0 0 1 1 1 1 Antitoxin to bacterial toxin RNase LS or RnlA DUF4321 PF14209.6 NODE_28749_length_752_cov_77.912134_g22652_i0forward_frame_2 - 0.0075 16.1 2.6 0.18 11.7 0.1 3.2 3 0 0 3 3 3 2 Domain of unknown function (DUF4321) Transmemb_17 PF09799.9 NODE_28733_length_752_cov_214.029289_g22638_i0reverse_frame_2 - 2.3e-09 37.8 4.4 2.3e-09 37.8 4.4 2.2 2 1 0 2 2 2 1 Predicted membrane protein FAST_1 PF06743.15 NODE_28732_length_752_cov_231.264993_g22637_i0reverse_frame_3 - 0.0014 18.5 1.5 0.62 10.1 0.0 3.9 2 1 3 5 5 5 1 FAST kinase-like protein, subdomain 1 DUF4235 PF14019.6 NODE_28732_length_752_cov_231.264993_g22637_i0reverse_frame_3 - 0.029 14.4 0.4 0.2 11.7 0.0 2.6 3 1 0 3 3 3 0 Protein of unknown function (DUF4235) ErmC PF06308.11 NODE_28724_length_752_cov_667.195258_g6688_i8reverse_frame_2 - 0.054 13.9 0.3 0.15 12.4 0.3 1.8 1 0 0 1 1 1 0 23S rRNA methylastransferase leader peptide (ErmCL) XTBD PF11952.8 NODE_28724_length_752_cov_667.195258_g6688_i8forward_frame_2 - 0.0046 16.7 0.2 0.0087 15.8 0.2 1.4 1 0 0 1 1 1 1 XRN-Two Binding Domain, XTBD XTBD PF11952.8 NODE_28723_length_752_cov_677.739191_g6688_i7forward_frame_2 - 0.0048 16.6 0.2 0.0087 15.8 0.2 1.3 1 0 0 1 1 1 1 XRN-Two Binding Domain, XTBD HAD_2 PF13419.6 NODE_28715_length_753_cov_2.231198_g22623_i0forward_frame_3 - 5.9e-17 62.3 0.0 7.7e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 NODE_28715_length_753_cov_2.231198_g22623_i0forward_frame_3 - 5.8e-12 46.3 0.0 9.4e-10 39.1 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 NODE_28715_length_753_cov_2.231198_g22623_i0forward_frame_3 - 8.3e-05 23.1 0.1 0.00016 22.1 0.1 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF3440 PF11922.8 NODE_28712_length_753_cov_2.961003_g22620_i0forward_frame_3 - 1.1e-20 74.2 0.0 1.9e-20 73.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3440) PAPS_reduct PF01507.19 NODE_28712_length_753_cov_2.961003_g22620_i0forward_frame_3 - 1.6e-06 28.3 0.1 2.4e-06 27.7 0.1 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family zf-RING_10 PF16685.5 NODE_28707_length_753_cov_4.703343_g22615_i0reverse_frame_3 - 0.0041 17.2 0.1 0.0071 16.5 0.1 1.3 1 0 0 1 1 1 1 zinc RING finger of MSL2 Ribosomal_L31 PF01197.18 NODE_28707_length_753_cov_4.703343_g22615_i0reverse_frame_2 - 6e-05 23.2 0.3 0.00017 21.7 0.1 1.9 2 0 0 2 2 2 1 Ribosomal protein L31 Ribosomal_S5 PF00333.20 ORF9875 - 6.1e-15 55.0 0.2 1.2e-14 54.0 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 ORF9875 - 0.00028 20.3 0.0 0.00072 19.0 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein S5, C-terminal domain PhyH PF05721.13 ORF98504 - 1.5e-17 64.6 0.2 2e-17 64.2 0.2 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Zip PF02535.22 ORF97457 - 3.8e-27 95.4 0.0 4.2e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter DUF4520 PF15016.6 ORF97457 - 0.086 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4520) DUF3397 PF11877.8 ORF97457 - 2 8.6 6.0 1.7 8.9 2.9 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF3397) Shisa PF13908.6 ORF95296 - 0.023 14.9 0.6 0.023 14.9 0.6 1.9 1 1 0 2 2 2 0 Wnt and FGF inhibitory regulator 7TM_GPCR_Str PF10326.9 ORF95296 - 0.74 9.1 3.6 0.74 9.1 2.0 1.7 1 1 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Str Nop52 PF05997.12 ORF90372 - 3.9e-07 30.1 0.2 8.3e-07 29.0 0.1 1.7 2 0 0 2 2 2 1 Nucleolar protein,Nop52 Regnase_1_C PF18561.1 ORF88612 - 0.035 13.8 0.1 0.095 12.4 0.0 1.7 2 0 0 2 2 2 0 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain DAO PF01266.24 ORF87274 - 8e-27 94.7 0.0 9.8e-27 94.4 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase FadA PF09403.10 ORF8616 - 0.1 13.1 10.7 0.093 13.2 5.7 3.0 2 1 1 3 3 3 0 Adhesion protein FadA DUF4407 PF14362.6 ORF8616 - 0.92 8.8 2.7 1.3 8.3 2.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Ac76 PF05814.11 ORF85557 - 0.033 14.2 1.1 0.033 14.2 1.1 2.9 3 0 0 3 3 3 0 Orf76 (Ac76) PDR_CDR PF06422.12 ORF85557 - 2 8.4 6.6 5.2 7.0 0.6 2.7 2 0 0 2 2 2 0 CDR ABC transporter EF-hand_7 PF13499.6 ORF84706 - 4.6e-11 43.0 6.2 9.9e-05 22.7 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF84706 - 7.7e-08 31.7 12.3 0.01 15.7 0.7 4.4 4 1 1 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF84706 - 2.4e-07 29.8 8.1 0.062 12.9 0.1 3.9 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF84706 - 5.7e-07 29.3 3.4 0.021 14.6 0.5 3.0 2 1 0 2 2 2 2 EF-hand domain pair DUF5580 PF17743.1 ORF84706 - 0.003 16.2 0.0 0.0038 15.8 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5580) EF-hand_5 PF13202.6 ORF84706 - 2.5 7.7 6.6 26 4.5 0.0 3.9 4 0 0 4 4 4 0 EF hand Rhodanese PF00581.20 ORF7437 - 9.7e-06 26.1 0.0 3.5e-05 24.3 0.0 1.9 1 1 0 1 1 1 1 Rhodanese-like domain Prot_ATP_OB_N PF17758.1 ORF7437 - 0.0027 17.3 0.1 0.013 15.1 0.0 2.1 2 0 0 2 2 2 1 Proteasomal ATPase OB N-terminal domain Transposase_1 PF01359.18 ORF7437 - 0.1 12.5 0.0 0.29 11.0 0.0 1.7 2 0 0 2 2 2 0 Transposase (partial DDE domain) RHINO PF15319.6 ORF74109 - 0.0083 16.2 1.6 0.011 15.7 1.6 1.1 1 0 0 1 1 1 1 RAD9, RAD1, HUS1-interacting nuclear orphan protein TpcC PF12642.7 ORF74109 - 0.1 12.4 4.3 0.18 11.6 4.4 1.3 1 1 0 1 1 1 0 Conjugative transposon protein TcpC ENTH PF01417.20 ORF74019 - 1.5e-17 63.8 0.2 1.5e-17 63.8 0.2 1.9 2 0 0 2 2 2 1 ENTH domain CDC45 PF02724.14 ORF74019 - 0.0067 14.8 15.8 0.0073 14.7 15.8 1.1 1 0 0 1 1 1 1 CDC45-like protein Nop14 PF04147.12 ORF74019 - 0.012 13.9 17.8 0.014 13.7 17.8 1.0 1 0 0 1 1 1 0 Nop14-like family SAPS PF04499.15 ORF74019 - 0.038 12.8 7.8 0.039 12.7 7.8 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein RR_TM4-6 PF06459.12 ORF74019 - 0.059 13.2 12.9 0.074 12.9 12.9 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PPL5 PF18168.1 ORF74019 - 0.08 12.2 12.7 0.12 11.7 12.7 1.2 1 0 0 1 1 1 0 Prim-pol family 5 RNA_polI_A34 PF08208.11 ORF74019 - 0.21 11.6 27.6 0.29 11.2 27.6 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 RNA_pol_Rpc4 PF05132.14 ORF74019 - 0.23 11.9 9.3 0.33 11.4 9.3 1.3 1 0 0 1 1 1 0 RNA polymerase III RPC4 Coilin_N PF15862.5 ORF74019 - 0.36 10.6 23.6 2.7 7.8 23.6 2.4 1 1 0 1 1 1 0 Coilin N-terminus DDHD PF02862.17 ORF74019 - 0.39 10.8 5.6 0.57 10.3 5.6 1.3 1 0 0 1 1 1 0 DDHD domain Rtf2 PF04641.12 ORF74019 - 0.46 9.8 18.4 0.82 9.0 18.4 1.4 1 0 0 1 1 1 0 Rtf2 RING-finger CPSF100_C PF13299.6 ORF74019 - 0.74 10.0 10.8 1.2 9.3 10.8 1.3 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal Vfa1 PF08432.10 ORF74019 - 0.87 9.9 19.6 2.1 8.6 19.6 1.7 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF913 PF06025.12 ORF74019 - 1 8.3 6.6 1.3 8.0 6.6 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) PGA2 PF07543.12 ORF74019 - 1.2 9.1 20.0 2.3 8.2 20.0 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 SLC12 PF03522.15 ORF74019 - 1.4 7.8 9.3 1.7 7.6 9.3 1.1 1 0 0 1 1 1 0 Solute carrier family 12 NPR3 PF03666.13 ORF74019 - 3.2 6.4 18.4 4.5 6.0 18.4 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 GREB1 PF15782.5 ORF74019 - 3.3 4.7 7.5 3.6 4.6 7.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer TRAP_alpha PF03896.16 ORF74019 - 4.1 6.5 11.2 5.6 6.1 11.2 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Presenilin PF01080.17 ORF74019 - 4.2 6.0 14.9 5.5 5.6 14.9 1.1 1 0 0 1 1 1 0 Presenilin Dsh_C PF12316.8 ORF74019 - 4.3 7.7 12.6 5.6 7.3 12.6 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Neur_chan_memb PF02932.16 ORF74019 - 4.5 7.2 4.5 5.4 7.0 4.5 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region NOA36 PF06524.12 ORF74019 - 5.4 6.2 18.5 8.7 5.6 18.5 1.2 1 0 0 1 1 1 0 NOA36 protein MCM_bind PF09739.9 ORF74019 - 5.7 5.3 15.4 7.9 4.8 15.4 1.1 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Hid1 PF12722.7 ORF74019 - 6.8 4.7 12.3 7.7 4.5 12.3 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF4551 PF15087.6 ORF74019 - 8.2 5.1 10.8 11 4.7 10.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) NARP1 PF12569.8 ORF74019 - 8.9 5.1 21.3 13 4.5 21.3 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Med19 PF10278.9 ORF74019 - 9.6 6.1 22.9 19 5.2 22.9 1.5 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF2151 PF10221.9 ORF74019 - 9.9 4.6 12.1 13 4.2 12.1 1.1 1 0 0 1 1 1 0 Cell cycle and development regulator Complex1_LYR_2 PF13233.6 ORF73372 - 0.24 12.2 5.0 19 6.1 5.0 2.3 1 1 0 1 1 1 0 Complex1_LYR-like His_Phos_1 PF00300.22 ORF70717 - 2.5e-17 63.2 0.0 6.6e-16 58.6 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) His_Phos_2 PF00328.22 ORF70717 - 0.0038 16.6 0.2 0.016 14.6 0.0 1.7 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 2) ATG101 PF07855.12 ORF69418 - 0.022 14.7 0.2 0.039 13.9 0.2 1.5 1 0 0 1 1 1 0 Autophagy-related protein 101 LPD11 PF18824.1 ORF69418 - 0.025 14.7 2.0 0.059 13.4 0.0 2.5 3 0 0 3 3 3 0 Large polyvalent protein-associated domain 11 His_Phos_1 PF00300.22 ORF66533 - 2.5e-17 63.2 0.0 6.6e-16 58.6 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) His_Phos_2 PF00328.22 ORF66533 - 0.0038 16.6 0.2 0.016 14.6 0.0 1.7 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 2) GcpE PF04551.14 ORF63704 - 0.041 13.0 0.1 0.057 12.5 0.1 1.2 1 0 0 1 1 1 0 GcpE protein CRAL_TRIO PF00650.20 ORF63101 - 1.6e-20 73.5 0.0 1.9e-20 73.2 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain His_Phos_1 PF00300.22 ORF62400 - 2.5e-17 63.2 0.0 6.6e-16 58.6 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) His_Phos_2 PF00328.22 ORF62400 - 0.0038 16.6 0.2 0.016 14.6 0.0 1.7 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 2) DUF2258 PF10015.9 ORF59825 - 0.16 12.1 1.6 0.38 10.9 1.6 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2258) Renin_r PF07850.14 ORF59825 - 1.5 9.4 5.7 3.1 8.4 0.1 3.0 1 1 1 3 3 3 0 Renin receptor-like protein DAG_kinase_N PF14513.6 ORF57297 - 0.12 12.6 0.9 0.17 12.1 0.9 1.2 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus His_Phos_1 PF00300.22 ORF51562 - 8.3e-37 126.8 0.1 2.6e-30 105.6 0.2 2.0 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) TAF6_C PF07571.13 ORF51562 - 0.15 12.4 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 TAF6 C-terminal HEAT repeat domain ABM PF03992.16 ORF4706 - 3.5e-24 84.7 1.3 2.9e-13 49.7 0.1 2.2 2 0 0 2 2 2 2 Antibiotic biosynthesis monooxygenase Methyltransf_21 PF05050.12 ORF45847 - 7.3e-09 35.9 0.0 9.4e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase FkbM domain TSNAXIP1_N PF15739.5 ORF45407 - 0.86 10.0 7.1 0.14 12.5 0.5 2.8 1 1 2 3 3 3 0 Translin-associated factor X-interacting N-terminus Tim17 PF02466.19 ORF45190 - 0.11 12.9 0.2 0.18 12.2 0.2 1.5 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family EF-hand_7 PF13499.6 ORF44846 - 7.7e-06 26.3 0.4 1.5e-05 25.4 0.4 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF44846 - 2e-05 24.3 0.4 3.8e-05 23.4 0.4 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_4 PF12763.7 ORF44846 - 7e-05 22.7 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_1 PF00036.32 ORF44846 - 0.00017 20.9 0.3 0.0084 15.6 0.1 2.5 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF44846 - 0.0049 16.7 0.2 1.1 9.4 0.1 2.6 2 0 0 2 2 2 1 EF-hand domain UBA PF00627.31 ORF44846 - 0.13 12.2 0.0 0.43 10.5 0.0 1.9 2 0 0 2 2 2 0 UBA/TS-N domain Ribosomal_S15 PF00312.22 ORF43471 - 4.3e-16 58.9 2.2 6.8e-16 58.3 2.2 1.3 1 0 0 1 1 1 1 Ribosomal protein S15 PapD_N PF00345.20 ORF39756 - 2e-37 127.9 2.6 6e-37 126.3 0.6 2.2 2 0 0 2 2 2 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 ORF39756 - 9.2e-10 38.7 2.0 2.5e-09 37.4 2.0 1.8 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain 2OG-FeII_Oxy_3 PF13640.6 ORF37284 - 0.041 14.8 0.0 0.079 13.9 0.0 1.5 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Ank_5 PF13857.6 ORF36399 - 6.8e-19 67.7 1.0 2.7e-09 37.1 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF36399 - 9.1e-13 48.0 0.7 6.9e-05 23.1 0.1 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF36399 - 2.7e-12 47.1 0.9 5.5e-12 46.1 0.9 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF36399 - 2.7e-12 45.7 0.1 4.6e-05 23.5 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF36399 - 7.9e-12 45.5 0.2 6.4e-05 23.4 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) PEGA PF08308.11 ORF36399 - 0.0094 15.8 0.0 0.24 11.3 0.0 2.6 1 1 1 2 2 2 1 PEGA domain UCH PF00443.29 ORF35705 - 1.6e-22 80.2 5.4 2.9e-22 79.4 5.3 1.5 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF35705 - 6.8e-06 25.9 1.5 1e-05 25.3 1.5 1.3 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase SMI1_KNR4 PF09346.10 ORF35705 - 0.0062 16.9 0.4 0.011 16.1 0.4 1.7 1 1 0 1 1 1 1 SMI1 / KNR4 family (SUKH-1) Peptidase_C98 PF15499.6 ORF35705 - 0.023 14.2 1.7 0.028 13.9 0.7 1.6 1 1 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase Acyl-CoA_dh_M PF02770.19 ORF35156 - 2.1e-07 31.0 0.0 4.2e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_ox_N PF14749.6 ORF35156 - 0.029 14.9 0.0 0.046 14.3 0.0 1.3 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal Vps53_N PF04100.12 ORF35156 - 0.03 13.3 0.0 0.039 12.9 0.0 1.2 1 0 0 1 1 1 0 Vps53-like, N-terminal FAE1_CUT1_RppA PF08392.12 ORF35156 - 0.062 12.6 0.0 0.092 12.0 0.0 1.2 1 0 0 1 1 1 0 FAE1/Type III polyketide synthase-like protein Imm5 PF14423.6 ORF33333 - 8.1e-05 22.9 2.6 8.1e-05 22.9 2.6 2.3 1 1 1 2 2 2 1 Immunity protein Imm5 BAG6 PF12057.8 ORF33333 - 0.0059 16.3 0.6 0.037 13.7 0.1 2.4 3 0 0 3 3 3 1 BCL2-associated athanogene 6 Spore_III_AB PF09548.10 ORF33333 - 0.01 15.9 0.8 0.01 15.9 0.8 2.0 2 1 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) CLZ PF16526.5 ORF33333 - 0.049 14.0 2.7 0.7 10.3 0.1 3.3 3 1 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ZapB PF06005.12 ORF33333 - 0.26 11.7 5.8 0.12 12.9 1.8 2.4 2 2 0 2 2 2 0 Cell division protein ZapB GrpE PF01025.19 ORF33333 - 0.84 9.3 17.6 0.11 12.2 8.8 2.8 1 1 1 2 2 2 0 GrpE Tsg PF04668.12 ORF33333 - 1.9 9.1 4.6 2.3 8.9 0.5 2.4 1 1 1 2 2 2 0 Twisted gastrulation (Tsg) protein conserved region DUF4795 PF16043.5 ORF33333 - 2.1 7.9 17.4 5.4 6.6 4.7 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) E2F_CC-MB PF16421.5 ORF33333 - 8.2 6.9 10.9 20 5.6 2.1 3.2 1 1 1 2 2 2 0 E2F transcription factor CC-MB domain Tim17 PF02466.19 ORF32690 - 0.00038 20.8 0.0 0.00069 20.0 0.0 1.5 1 1 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family AGTRAP PF06396.11 ORF32690 - 0.054 13.3 0.6 0.086 12.6 0.6 1.3 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) Lipase_GDSL PF00657.22 ORF32528 - 0.13 12.2 1.4 0.32 10.9 1.2 2.0 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase Complex1_LYR_2 PF13233.6 ORF32528 - 0.25 12.1 4.3 21 5.9 4.3 2.3 1 1 0 1 1 1 0 Complex1_LYR-like DUF4477 PF14780.6 ORF28734 - 0.02 14.5 0.1 0.02 14.5 0.1 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4477) Snapin_Pallidin PF14712.6 ORF28734 - 1.2 9.6 14.5 0.66 10.4 1.0 2.8 2 1 0 2 2 2 0 Snapin/Pallidin Noelin-1 PF12308.8 ORF28734 - 1.7 8.7 5.4 4.3 7.4 1.1 3.1 3 1 0 3 3 3 0 Neurogenesis glycoprotein DUF3552 PF12072.8 ORF28734 - 5.2 6.4 14.6 0.37 10.2 4.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) HSP70 PF00012.20 ORF27475 - 2.2e-20 72.4 0.4 1.2e-10 40.3 0.0 2.1 1 1 1 2 2 2 2 Hsp70 protein NifW PF03206.14 ORF27475 - 0.046 14.2 0.0 0.08 13.5 0.0 1.5 1 1 0 1 1 1 0 Nitrogen fixation protein NifW Spidroin_N PF16763.5 ORF2488 - 0.024 14.7 1.7 0.024 14.7 1.7 1.9 2 0 0 2 2 2 0 Major ampullate spidroin 1, spider silk protein 1, N-term Cupin_4 PF08007.12 ORF2477 - 4.7e-08 32.9 0.0 6e-08 32.5 0.0 1.2 1 0 0 1 1 1 1 Cupin superfamily protein Cupin_8 PF13621.6 ORF2477 - 0.13 12.0 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Cupin-like domain DUF2813 PF11398.8 ORF19978 - 7.7e-32 111.0 0.6 1.7e-31 109.8 0.3 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2813) Amidohydro_3 PF07969.11 ORF19978 - 0.02 14.4 0.0 0.024 14.1 0.0 1.1 1 0 0 1 1 1 0 Amidohydrolase family Toprim_2 PF13155.6 ORF19978 - 0.11 12.9 0.0 0.21 12.1 0.0 1.4 1 0 0 1 1 1 0 Toprim-like GUN4 PF05419.12 ORF18293 - 9.8e-46 155.3 0.1 1.4e-45 154.8 0.1 1.2 1 0 0 1 1 1 1 GUN4-like EF-hand_5 PF13202.6 ORF15077 - 1.3e-06 27.6 0.0 5.3e-06 25.7 0.1 1.9 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF15077 - 0.00013 21.6 0.1 0.00062 19.5 0.1 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF15077 - 0.00015 22.1 0.0 0.00038 20.9 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF15077 - 0.00018 20.8 0.1 0.0009 18.6 0.1 2.1 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF15077 - 0.027 14.3 0.1 0.21 11.5 0.0 2.3 3 0 0 3 3 3 0 EF-hand domain pair GUN4 PF05419.12 ORF14958 - 9.8e-46 155.3 0.1 1.4e-45 154.8 0.1 1.2 1 0 0 1 1 1 1 GUN4-like Clathrin_lg_ch PF01086.17 ORF14547 - 7.7e-15 55.6 17.6 9.5e-15 55.3 17.6 1.1 1 0 0 1 1 1 1 Clathrin light chain N1221 PF07923.13 ORF14547 - 0.019 14.2 3.2 0.028 13.6 3.2 1.2 1 0 0 1 1 1 0 N1221-like protein Paz_1 PF18349.1 ORF14547 - 0.03 14.3 1.7 0.04 13.9 0.8 1.6 1 1 0 1 1 1 0 PAZ domain Rgp1 PF08737.10 ORF14547 - 1.2 8.3 6.4 1.5 7.9 6.4 1.1 1 0 0 1 1 1 0 Rgp1 Mvb12 PF09452.10 ORF14547 - 3.7 8.0 7.3 1.9 9.0 2.7 2.4 1 1 1 2 2 2 0 ESCRT-I subunit Mvb12 LMBR1 PF04791.16 ORF14547 - 5.6 5.8 5.0 6.8 5.5 5.0 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Fasciclin PF02469.22 ORF12859 - 1.2e-26 93.4 0.0 4.8e-22 78.5 0.0 2.4 2 1 0 2 2 2 2 Fasciclin domain MFAP1 PF06991.11 ORF12820 - 1.7e-57 194.8 29.6 2e-57 194.5 29.6 1.1 1 0 0 1 1 1 1 Microfibril-associated/Pre-mRNA processing PX PF00787.24 ORF11642 - 1.5e-20 73.3 2.1 2.6e-20 72.5 1.7 1.6 2 0 0 2 2 2 1 PX domain RecG_N PF17190.4 ORF11642 - 0.52 11.1 5.8 1 10.1 0.3 2.7 2 1 1 3 3 3 0 RecG N-terminal helical domain Dicer_dimer PF03368.14 ORF11497 - 0.0042 17.2 0.0 0.01 16.0 0.0 1.6 1 0 0 1 1 1 1 Dicer dimerisation domain CRAL_TRIO PF00650.20 ORF111066 - 9.7e-17 61.1 0.3 1.7e-16 60.4 0.3 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF111066 - 0.0032 17.6 0.0 0.005 17.0 0.0 1.2 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF285 PF03382.14 ORF111066 - 0.04 13.7 0.3 0.1 12.4 0.1 1.7 2 0 0 2 2 2 0 Mycoplasma protein of unknown function, DUF285 DUF3438 PF11920.8 ORF111066 - 0.78 8.9 2.5 1.1 8.4 2.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) CH PF00307.31 ORF109983 - 9.1e-12 45.1 0.0 1.4e-11 44.6 0.0 1.3 1 0 0 1 1 1 1 Calponin homology (CH) domain CDC24 PF06395.11 ORF109983 - 0.18 12.0 0.0 0.31 11.3 0.0 1.3 1 0 0 1 1 1 0 CDC24 Calponin Peptidase_S41_N PF11918.8 ORF109527 - 0.054 13.7 0.4 1.1 9.5 0.0 2.2 2 0 0 2 2 2 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP DUF1765 PF08578.10 ORF108322 - 0.01 16.3 1.3 0.046 14.2 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1765) Vac14_Fig4_bd PF11916.8 ORF108322 - 0.037 13.7 0.1 0.13 11.9 0.2 1.8 2 0 0 2 2 2 0 Vacuolar protein 14 C-terminal Fig4p binding RRT14 PF17075.5 ORF108322 - 4.3 7.4 17.4 9.5 6.3 8.6 2.1 1 1 1 2 2 2 0 Regular of rDNA transcription protein 14 AAA_9 PF12781.7 ORF1083 - 2.2e-49 167.6 4.0 3.1e-49 167.1 4.0 1.2 1 0 0 1 1 1 1 ATP-binding dynein motor region FlgN PF05130.12 ORF1083 - 0.078 13.5 7.1 0.14 12.7 7.1 1.4 1 0 0 1 1 1 0 FlgN protein Utp14 PF04615.13 ORF1083 - 0.091 11.3 4.3 0.11 11.0 4.3 1.1 1 0 0 1 1 1 0 Utp14 protein DUF2207 PF09972.9 ORF1083 - 0.14 10.9 2.0 0.21 10.3 2.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1788 PF08747.11 ORF1083 - 0.55 10.3 6.2 1.7 8.7 1.4 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF1788) SOAR PF16533.5 ORF1083 - 1.6 8.8 7.1 5.3 7.1 7.2 1.8 1 1 0 1 1 1 0 STIM1 Orai1-activating region Pkinase PF00069.25 ORF100415 - 2.4e-46 158.3 1.2 3.1e-46 157.9 1.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100415 - 1.4e-21 77.0 0.1 1.8e-21 76.6 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF100415 - 5e-07 29.3 0.0 6.9e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like PIP49_C PF12260.8 ORF100415 - 0.1 12.2 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 Ras PF00071.22 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_1 - 0.0044 16.6 0.1 0.0075 15.9 0.1 1.4 1 0 0 1 1 1 1 Ras family AAA_7 PF12775.7 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_1 - 0.0045 16.5 0.0 0.0071 15.9 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region RsgA_GTPase PF03193.16 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_1 - 0.0051 16.7 0.0 0.0081 16.1 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_1 - 0.012 15.6 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Roc PF08477.13 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_1 - 0.018 15.3 0.0 0.033 14.4 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase MCM PF00493.23 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_1 - 0.019 14.1 0.0 0.027 13.6 0.0 1.1 1 0 0 1 1 1 0 MCM P-loop domain Ank_2 PF12796.7 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 3.6e-31 107.6 0.0 3.9e-15 56.2 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 1.6e-24 85.9 0.4 1e-07 32.3 0.0 4.3 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 3.1e-22 78.0 1.8 0.00029 21.1 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 2.4e-21 73.5 1.2 0.0066 16.9 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 5.9e-21 74.3 0.9 3.6e-07 30.3 0.0 4.1 1 1 3 4 4 4 4 Ankyrin repeats (many copies) bZIP_1 PF00170.21 NODE_29044_length_745_cov_356.195775_g22910_i0reverse_frame_1 - 1.2e-07 31.7 10.2 1.2e-07 31.7 10.2 1.9 2 0 0 2 2 2 1 bZIP transcription factor bZIP_2 PF07716.15 NODE_29044_length_745_cov_356.195775_g22910_i0reverse_frame_1 - 0.00051 20.1 14.7 0.00051 20.1 14.7 2.2 2 0 0 2 2 2 1 Basic region leucine zipper JTB PF05439.12 NODE_29044_length_745_cov_356.195775_g22910_i0forward_frame_1 - 0.13 12.4 0.2 0.32 11.1 0.2 1.6 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) CCDC24 PF15669.5 NODE_29022_length_746_cov_31.575246_g22895_i0reverse_frame_1 - 0.0067 16.3 2.3 0.0067 16.3 2.3 2.6 2 1 1 3 3 3 1 Coiled-coil domain-containing protein 24 family TolA_bind_tri PF16331.5 NODE_29022_length_746_cov_31.575246_g22895_i0reverse_frame_1 - 0.076 13.1 9.6 0.26 11.4 2.9 2.6 2 0 0 2 2 2 0 TolA binding protein trimerisation TMPIT PF07851.13 NODE_29022_length_746_cov_31.575246_g22895_i0reverse_frame_1 - 0.083 12.1 17.2 0.061 12.6 12.8 2.1 2 0 0 2 2 2 0 TMPIT-like protein APC_N_CC PF16689.5 NODE_29022_length_746_cov_31.575246_g22895_i0reverse_frame_1 - 1.1 9.4 14.4 4.4 7.4 4.0 3.0 2 0 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain COX16 PF14138.6 NODE_29022_length_746_cov_31.575246_g22895_i0reverse_frame_1 - 1.2 9.7 4.6 4.3 7.9 4.6 2.0 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 Swi5 PF07061.11 NODE_29022_length_746_cov_31.575246_g22895_i0reverse_frame_1 - 5 7.3 16.6 3.7 7.7 12.6 2.6 2 1 0 2 2 2 0 Swi5 YabA PF06156.13 NODE_29022_length_746_cov_31.575246_g22895_i0reverse_frame_1 - 5 7.8 20.3 5.8 7.6 0.7 3.1 1 1 1 2 2 2 0 Initiation control protein YabA Cep57_CLD_2 PF14197.6 NODE_29022_length_746_cov_31.575246_g22895_i0reverse_frame_1 - 6.2 7.0 14.5 19 5.4 2.7 2.9 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 Sec20 PF03908.13 NODE_29022_length_746_cov_31.575246_g22895_i0forward_frame_1 - 0.45 10.5 2.6 3.5 7.6 0.3 2.3 2 0 0 2 2 2 0 Sec20 Polysacc_syn_2C PF08485.10 NODE_29015_length_746_cov_99.001406_g22888_i0forward_frame_1 - 0.00015 21.4 0.7 0.13 11.9 0.1 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein C-terminal Leader_Trp PF08255.11 NODE_29015_length_746_cov_99.001406_g22888_i0forward_frame_1 - 1.6 8.9 8.4 5.4 7.3 1.3 3.2 2 0 0 2 2 2 0 Trp-operon Leader Peptide RCC1_2 PF13540.6 NODE_29012_length_746_cov_141.739803_g10665_i1forward_frame_1 - 2.3e-07 30.4 10.4 0.41 10.5 0.1 4.4 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_29012_length_746_cov_141.739803_g10665_i1forward_frame_1 - 0.0013 19.2 0.0 18 5.9 0.0 4.2 5 0 0 5 5 5 1 Spectrin repeat DUF155 PF02582.14 NODE_29012_length_746_cov_141.739803_g10665_i1forward_frame_1 - 0.0051 16.9 3.2 9.5 6.3 0.0 3.9 2 1 2 4 4 4 1 Uncharacterised ACR, YagE family COG1723 Cerato-platanin PF07249.12 NODE_29012_length_746_cov_141.739803_g10665_i1forward_frame_1 - 2 8.6 6.6 4.9 7.3 0.4 2.8 1 1 1 3 3 3 0 Cerato-platanin TYW3 PF02676.14 NODE_28988_length_747_cov_3.508427_g22866_i0forward_frame_1 - 0.063 12.6 0.1 0.098 12.0 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase TYW3 ATP-synt_S1 PF05827.12 NODE_28959_length_747_cov_260.879213_g22838_i0forward_frame_1 - 0.05 13.4 0.9 0.085 12.7 0.9 1.3 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) GW PF13457.6 NODE_28935_length_748_cov_5.869565_g22819_i0forward_frame_2 - 9.8 6.9 10.8 3.5 8.3 5.8 2.6 3 0 0 3 3 3 0 GW (Gly-Tryp) dipeptide domain Deltameth_res PF16020.5 NODE_28933_length_748_cov_81.353436_g22817_i0forward_frame_3 - 0.057 13.3 0.2 0.17 11.8 0.2 1.8 1 0 0 1 1 1 0 Deltamethrin resistance SHMT PF00464.19 NODE_28880_length_749_cov_112.850140_g22767_i0reverse_frame_3 - 0.085 11.4 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Serine hydroxymethyltransferase Elongin_A PF06881.11 NODE_28880_length_749_cov_112.850140_g22767_i0forward_frame_3 - 0.059 13.9 0.0 2.1 8.9 0.0 2.2 2 0 0 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A SseC PF04888.12 NODE_28850_length_749_cov_27038.966387_g6825_i1reverse_frame_3 - 0.00039 20.1 2.9 0.00075 19.2 2.9 1.3 1 0 0 1 1 1 1 Secretion system effector C (SseC) like family Adeno_E3_CR2 PF02439.15 NODE_28848_length_750_cov_2.608392_g22739_i0reverse_frame_2 - 0.41 10.4 6.4 0.63 9.8 3.1 2.4 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 EF_assoc_1 PF08355.12 NODE_28840_length_750_cov_74.760839_g22731_i0forward_frame_3 - 0.0038 16.8 0.1 0.0086 15.6 0.1 1.6 1 0 0 1 1 1 1 EF hand associated Radial_spoke PF04712.12 NODE_28840_length_750_cov_74.760839_g22731_i0forward_frame_3 - 0.0074 15.3 2.7 0.012 14.6 2.7 1.4 1 0 0 1 1 1 1 Radial spokehead-like protein HNH_4 PF13395.6 NODE_28806_length_750_cov_10003.158042_g21013_i2forward_frame_3 - 0.32 10.9 4.2 0.59 10.1 4.2 1.4 1 0 0 1 1 1 0 HNH endonuclease SR-25 PF10500.9 NODE_28806_length_750_cov_10003.158042_g21013_i2forward_frame_3 - 1.4 8.5 11.6 2.8 7.5 11.6 1.4 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Rdx PF10262.9 NODE_28806_length_750_cov_10003.158042_g21013_i2forward_frame_2 - 6.8e-07 29.4 0.0 1.5e-06 28.3 0.0 1.5 1 0 0 1 1 1 1 Rdx family Ank_4 PF13637.6 ORF99020 - 2.5e-07 31.1 1.9 0.00013 22.4 0.3 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF99020 - 4e-07 30.2 0.3 1e-06 28.9 0.2 1.8 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF99020 - 4.2e-05 24.1 0.3 9.3e-05 23.0 0.3 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF99020 - 9.5e-05 22.7 0.9 0.00037 20.8 0.5 2.2 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 ORF99020 - 0.00037 20.7 0.4 0.011 16.2 0.1 3.0 3 0 0 3 3 3 1 Ankyrin repeat EF-hand_6 PF13405.6 ORF99020 - 0.034 14.1 0.1 0.31 11.1 0.0 2.5 2 1 0 2 2 2 0 EF-hand domain Tup_N PF08581.10 ORF96306 - 0.02 15.2 17.1 0.051 13.9 3.3 3.5 3 1 0 3 3 3 0 Tup N-terminal Choline_kin_N PF04428.14 ORF96306 - 0.13 12.0 2.0 0.16 11.7 0.2 2.1 2 0 0 2 2 2 0 Choline kinase N terminus Suf PF05843.14 ORF95654 - 2.7e-15 57.1 0.0 6.1e-06 26.4 0.0 3.1 1 1 2 3 3 3 2 Suppressor of forked protein (Suf) TPR_14 PF13428.6 ORF95654 - 9.5e-08 32.3 4.3 0.017 15.9 0.1 5.5 3 1 3 6 6 6 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF95654 - 2.8e-05 24.5 4.9 0.15 12.7 0.1 4.7 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF95654 - 3e-05 24.2 1.7 0.59 10.5 0.4 3.8 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF95654 - 4e-05 24.1 0.1 0.14 12.6 0.0 4.0 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF95654 - 7.5e-05 23.3 2.6 0.4 11.4 0.9 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat NRDE-2 PF08424.10 ORF95654 - 0.00011 21.4 0.2 0.065 12.3 0.3 2.5 1 1 1 2 2 2 2 NRDE-2, necessary for RNA interference TPR_8 PF13181.6 ORF95654 - 0.00054 20.0 2.0 0.11 12.8 0.1 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF95654 - 0.0013 18.7 4.9 0.22 11.7 0.2 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat TAF1_subA PF14929.6 ORF95654 - 0.0076 15.7 0.1 0.033 13.6 0.0 1.8 2 0 0 2 2 2 1 TAF RNA Polymerase I subunit A Wzy_C_2 PF11846.8 ORF95654 - 0.029 14.3 0.1 0.12 12.2 0.0 2.0 1 1 1 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal TPR_1 PF00515.28 ORF95654 - 0.052 13.4 0.6 0.4 10.6 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF95654 - 0.5 10.3 4.2 8.8 6.3 0.0 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat CTP_transf_1 PF01148.20 ORF92544 - 3e-65 220.6 10.0 3.4e-65 220.4 10.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family CarS-like PF01864.17 ORF92544 - 0.0065 16.5 3.3 0.012 15.6 0.3 2.3 2 0 0 2 2 2 1 CDP-archaeol synthase EptA_B_N PF08019.12 ORF92544 - 0.0068 16.3 2.5 0.0068 16.3 2.5 2.0 2 0 0 2 2 2 1 Phosphoethanolamine transferase EptA/EptB DUF2085 PF09858.9 ORF92544 - 1.2 9.6 10.2 0.75 10.3 2.6 2.7 1 1 2 3 3 3 0 Predicted membrane protein (DUF2085) Peptidase_U4 PF03419.13 ORF92544 - 1.6 7.9 9.0 0.76 9.0 6.6 1.6 1 1 0 1 1 1 0 Sporulation factor SpoIIGA DUF4199 PF13858.6 ORF92544 - 3.4 8.0 11.6 0.78 10.1 3.4 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF4199) FapA PF03961.13 ORF91133 - 0.37 9.4 14.6 0.52 8.9 14.6 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 ORF91133 - 8.5 5.4 12.5 10 5.1 12.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PI3_PI4_kinase PF00454.27 ORF90367 - 1.7e-30 106.7 0.2 6.2e-27 95.0 0.0 2.3 2 0 0 2 2 2 2 Phosphatidylinositol 3- and 4-kinase Amidohydro_1 PF01979.20 ORF90081 - 0.11 11.8 0.2 0.14 11.4 0.2 1.2 1 0 0 1 1 1 0 Amidohydrolase family EF-hand_1 PF00036.32 ORF88440 - 1.2e-25 87.0 18.6 3.9e-07 29.2 0.1 6.0 6 1 0 6 6 6 5 EF hand EF-hand_6 PF13405.6 ORF88440 - 2.1e-22 77.1 14.4 0.00011 21.9 0.1 5.7 5 1 0 5 5 5 5 EF-hand domain EF-hand_7 PF13499.6 ORF88440 - 2.8e-20 72.6 13.9 3.3e-09 37.1 0.9 3.4 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF88440 - 1.7e-13 49.4 15.6 0.00036 19.9 0.0 5.7 5 0 0 5 5 5 5 EF hand EF-hand_8 PF13833.6 ORF88440 - 3.2e-11 42.9 13.2 3.9e-06 26.6 0.2 5.2 4 1 1 5 5 5 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF88440 - 0.00018 21.8 0.7 0.16 12.3 0.0 3.4 3 1 0 3 3 3 1 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF88440 - 0.0035 17.3 5.3 0.56 10.1 0.0 4.2 3 2 1 4 4 4 1 Caleosin related protein EF-hand_4 PF12763.7 ORF88440 - 0.02 14.8 2.1 0.18 11.7 0.1 2.7 2 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand SHOCT PF09851.9 ORF88440 - 0.4 10.5 2.3 80 3.2 0.0 4.1 5 0 0 5 5 5 0 Short C-terminal domain Dockerin_1 PF00404.18 ORF88440 - 0.45 10.7 0.0 0.45 10.7 0.0 2.8 4 0 0 4 4 4 0 Dockerin type I domain GFO_IDH_MocA PF01408.22 ORF85971 - 1.1e-08 36.0 0.1 2e-08 35.1 0.1 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GLE1 PF07817.13 ORF85189 - 1.8e-13 50.3 0.7 1.1e-10 41.1 0.7 2.1 1 1 0 1 1 1 1 GLE1-like protein DUF812 PF05667.11 ORF83913 - 0.033 13.1 6.2 0.039 12.8 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Endomucin PF07010.12 ORF83913 - 0.11 12.5 24.2 0.13 12.2 24.2 1.1 1 0 0 1 1 1 0 Endomucin Hamartin PF04388.12 ORF83913 - 0.22 10.1 12.5 0.26 9.9 12.5 1.0 1 0 0 1 1 1 0 Hamartin protein SprA-related PF12118.8 ORF83913 - 0.32 10.1 26.1 0.41 9.7 26.1 1.0 1 0 0 1 1 1 0 SprA-related family Mucin PF01456.17 ORF83913 - 1.3 9.0 36.3 5.6 6.9 36.3 2.1 1 1 0 1 1 1 0 Mucin-like glycoprotein DDHD PF02862.17 ORF83913 - 9.9 6.2 9.5 58 3.7 9.6 1.8 1 1 0 1 1 1 0 DDHD domain SH3_4 PF06347.13 ORF82585 - 0.0023 17.7 0.9 0.0048 16.7 0.9 1.5 1 0 0 1 1 1 1 Bacterial SH3 domain PARP PF00644.20 ORF81635 - 1.5e-13 50.7 0.3 2.8e-12 46.6 0.3 2.1 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain RapA_C PF12137.8 ORF80892 - 1.7e-105 353.0 0.6 1.9e-105 352.8 0.6 1.0 1 0 0 1 1 1 1 RNA polymerase recycling family C-terminal COG2 PF06148.11 ORF80892 - 0.043 13.9 1.3 0.064 13.3 1.3 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Helicase_C PF00271.31 ORF78634 - 6.8e-25 87.6 0.5 9.4e-25 87.1 0.5 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Fructosamin_kin PF03881.14 ORF78634 - 0.014 14.6 0.2 0.021 14.1 0.2 1.2 1 0 0 1 1 1 0 Fructosamine kinase DUF5132 PF17195.4 ORF78634 - 0.048 13.8 2.3 0.37 10.9 1.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF5132) Nucleolin_bd PF16725.5 ORF78634 - 0.096 12.4 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Nucleolin binding domain Aldedh PF00171.22 ORF7789 - 1.4e-85 287.6 0.1 1.5e-85 287.5 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 ORF7789 - 0.091 12.2 0.0 4.7 6.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) RPAP3_C PF13877.6 ORF74998 - 5.6e-14 52.5 0.0 8.7e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 Potential Monad-binding region of RPAP3 Metallophos PF00149.28 ORF73512 - 2.6e-19 70.5 0.0 3.2e-19 70.2 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase ThiF PF00899.21 ORF71516 - 2.1e-64 217.2 0.3 2.6e-64 216.9 0.3 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 ORF71516 - 0.00033 20.9 1.3 0.0027 18.0 1.3 2.0 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 ORF71516 - 0.008 16.6 0.1 0.016 15.6 0.1 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 ORF71516 - 0.061 13.4 0.1 0.22 11.6 0.0 1.8 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase FAD_binding_3 PF01494.19 ORF71516 - 0.13 11.5 0.1 0.18 11.0 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain Ank_2 PF12796.7 ORF70476 - 5.3e-27 94.2 0.1 3.1e-12 46.9 0.2 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF70476 - 3.2e-22 77.9 0.9 3.8e-05 23.9 0.1 4.5 4 0 0 4 4 4 4 Ankyrin repeat Ank_4 PF13637.6 ORF70476 - 7.8e-20 71.0 0.0 1.2e-10 41.7 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF70476 - 2.2e-18 66.1 1.2 0.00015 21.9 0.1 5.2 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF70476 - 4.3e-18 63.5 0.1 0.017 15.6 0.0 5.2 5 0 0 5 5 5 4 Ankyrin repeat ubiquitin PF00240.23 ORF70476 - 8e-05 22.3 0.0 0.00012 21.7 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family DUF2407 PF10302.9 ORF70476 - 0.025 15.1 0.1 0.047 14.2 0.1 1.4 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Rad60-SLD PF11976.8 ORF70476 - 0.11 12.3 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like N6_N4_Mtase PF01555.18 ORF69166 - 1.4e-06 28.2 0.0 3.3e-06 27.0 0.0 1.5 2 0 0 2 2 2 1 DNA methylase Methyltransf_31 PF13847.6 ORF69166 - 0.00017 21.4 0.0 0.00027 20.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF69166 - 0.0058 17.3 0.0 0.013 16.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF69166 - 0.0062 17.2 0.0 0.019 15.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF69166 - 0.015 15.2 0.0 0.04 13.7 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain MethyltransfD12 PF02086.15 ORF69166 - 0.017 14.8 0.0 0.024 14.3 0.0 1.1 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_15 PF09445.10 ORF69166 - 0.023 14.3 0.0 0.049 13.2 0.0 1.5 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase Methyltransf_12 PF08242.12 ORF69166 - 0.028 15.2 0.0 0.073 13.8 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain TPMT PF05724.11 ORF69166 - 0.073 12.7 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) ADH_zinc_N PF00107.26 ORF69166 - 0.078 13.0 0.1 0.54 10.2 0.0 2.0 2 0 0 2 2 2 0 Zinc-binding dehydrogenase UPF0020 PF01170.18 ORF69166 - 0.11 12.2 0.2 0.9 9.2 0.1 2.0 1 1 1 2 2 2 0 Putative RNA methylase family UPF0020 SET PF00856.28 ORF68973 - 9.4e-06 26.1 0.0 2.2e-05 24.9 0.0 1.6 2 1 0 2 2 2 1 SET domain DUF1403 PF07183.11 ORF68973 - 0.0037 16.9 4.6 0.0086 15.7 4.6 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1403) APC1_C PF18122.1 ORF68973 - 0.0043 17.0 0.0 0.0069 16.4 0.0 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex sub unit 1 C-terminal domain DEAD PF00270.29 ORF68868 - 1.8e-05 24.6 0.8 4.6e-05 23.3 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase CDC45 PF02724.14 ORF68868 - 0.0054 15.1 13.5 0.0064 14.9 13.5 1.1 1 0 0 1 1 1 1 CDC45-like protein DUF1160 PF06648.11 ORF68868 - 0.027 14.5 1.3 0.046 13.7 1.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) DUF2052 PF09747.9 ORF68868 - 0.035 14.2 14.4 0.045 13.9 14.4 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) DUF4228 PF14009.6 ORF68868 - 0.45 10.9 5.9 0.9 9.9 5.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4228) SID-1_RNA_chan PF13965.6 ORF68868 - 0.89 7.9 3.6 0.94 7.8 3.6 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Y_phosphatase2 PF03162.13 ORF68868 - 2.6 7.6 6.6 1.1 8.8 1.9 2.1 2 0 0 2 2 2 0 Tyrosine phosphatase family FapA PF03961.13 ORF6642 - 0.37 9.4 14.6 0.52 8.9 14.6 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 ORF6642 - 8.5 5.4 12.5 10 5.1 12.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 MFS_1 PF07690.16 ORF65817 - 4.4e-07 29.1 6.5 5.4e-07 28.9 6.5 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily YitT_membrane PF02588.15 ORF65817 - 0.12 11.7 8.9 0.05 12.9 3.4 2.4 1 1 1 2 2 2 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DUF3537 PF12056.8 ORF65552 - 0.06 12.2 0.1 0.11 11.3 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3537) Sugar_tr PF00083.24 ORF64376 - 1.2e-31 110.1 0.2 1.3e-31 110.0 0.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF64376 - 3.8e-17 62.3 0.0 4.4e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF64376 - 5.5e-05 21.6 1.4 9.1e-05 20.9 0.0 1.7 1 1 1 2 2 2 1 Organic Anion Transporter Polypeptide (OATP) family TRI12 PF06609.13 ORF64376 - 0.11 10.9 5.6 0.14 10.6 5.6 1.3 1 1 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) Isochorismatase PF00857.20 ORF63039 - 1.2e-11 45.1 0.0 1.6e-11 44.7 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family Vps16_N PF04841.13 ORF63039 - 0.015 14.0 0.1 0.019 13.7 0.1 1.1 1 0 0 1 1 1 0 Vps16, N-terminal region DUF2015 PF09435.10 ORF62031 - 0.035 14.0 0.5 0.11 12.4 0.3 1.8 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF2015) Epimerase_2 PF02350.19 ORF62031 - 0.06 12.2 0.0 0.099 11.5 0.0 1.4 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase ThiF PF00899.21 ORF58329 - 0.054 12.8 0.0 0.1 11.9 0.0 1.5 1 1 0 1 1 1 0 ThiF family Rieske PF00355.26 ORF52035 - 9.5e-07 28.7 1.6 1.7e-05 24.6 0.1 2.3 1 1 1 2 2 2 2 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF52035 - 1.6e-05 24.7 0.0 3.2e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain DUF3498 PF12004.8 ORF50956 - 0.1 11.8 1.8 0.13 11.4 1.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) FLgD_tudor PF13861.6 ORF50956 - 8.6 6.7 11.0 20 5.5 0.2 2.3 2 0 0 2 2 2 0 FlgD Tudor-like domain Xan_ur_permease PF00860.20 ORF50808 - 1.6e-23 83.1 5.4 1.6e-23 83.1 5.4 1.5 2 0 0 2 2 2 1 Permease family GFA PF04828.14 ORF50488 - 0.0026 18.1 0.1 0.0049 17.2 0.1 1.5 1 0 0 1 1 1 1 Glutathione-dependent formaldehyde-activating enzyme PUB PF09409.10 ORF49171 - 3.4e-18 65.3 0.0 5.3e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 PUB domain Hexokinase_1 PF00349.21 ORF49171 - 0.075 12.9 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Hexokinase Suf PF05843.14 ORF49171 - 0.12 12.4 2.4 0.14 12.1 2.4 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) E1_UFD PF09358.10 ORF48792 - 0.081 13.6 2.0 8 7.2 0.1 2.5 2 0 0 2 2 2 0 Ubiquitin fold domain RcsD_ABL PF16359.5 ORF48792 - 0.12 12.6 1.1 15 5.8 0.0 2.5 1 1 1 2 2 2 0 RcsD-ABL domain JIP_LZII PF16471.5 ORF48512 - 0.0023 18.1 1.2 0.0055 16.8 1.2 1.6 1 0 0 1 1 1 1 JNK-interacting protein leucine zipper II SKA2 PF16740.5 ORF48512 - 0.37 10.6 9.3 0.69 9.7 9.3 1.4 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Motile_Sperm PF00635.26 ORF47975 - 1.9e-16 59.8 6.4 1.9e-16 59.8 6.4 2.3 3 0 0 3 3 3 1 MSP (Major sperm protein) domain DUF5001 PF16392.5 ORF47975 - 0.027 14.4 3.8 0.03 14.2 1.1 2.3 2 0 0 2 2 2 0 Ig-like domain TUTF7_u4 PF16631.5 ORF47975 - 2.7 8.7 6.0 3.5 8.3 1.3 2.6 2 1 1 3 3 3 0 Unstructured region 4 on terminal uridylyltransferase 7 HEAT PF02985.22 ORF47700 - 0.0015 18.7 0.1 2.5 8.6 0.1 3.8 4 0 0 4 4 4 2 HEAT repeat HEAT_2 PF13646.6 ORF47700 - 0.0085 16.5 0.2 2.7 8.4 0.0 2.8 1 1 2 3 3 3 2 HEAT repeats SGL PF08450.12 ORF4719 - 3.1e-17 63.0 0.0 4e-17 62.6 0.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 ORF4719 - 1.1e-06 28.7 0.0 4e-06 26.9 0.0 2.1 1 1 0 1 1 1 1 Strictosidine synthase NHL PF01436.21 ORF4719 - 1.8e-05 24.5 0.1 0.55 10.4 0.1 4.1 5 0 0 5 5 5 2 NHL repeat Arylesterase PF01731.20 ORF4719 - 0.00038 20.6 0.1 0.0087 16.2 0.0 2.6 1 1 1 2 2 2 1 Arylesterase Lactonase PF10282.9 ORF4719 - 0.0032 16.8 0.0 0.0097 15.2 0.0 1.7 1 1 0 1 1 1 1 Lactonase, 7-bladed beta-propeller Ldl_recept_b PF00058.17 ORF4719 - 0.042 14.3 0.4 1.7 9.2 0.0 3.0 2 1 0 2 2 2 0 Low-density lipoprotein receptor repeat class B PQQ_3 PF13570.6 ORF4719 - 0.085 13.4 1.1 15 6.2 0.0 3.6 4 0 0 4 4 4 0 PQQ-like domain DUF3860 PF12976.7 ORF41961 - 0.024 14.6 0.2 0.076 13.0 0.1 2.0 1 1 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3860) PAP2 PF01569.21 ORF41563 - 1e-11 44.7 0.5 1e-11 44.7 0.5 2.5 2 2 0 2 2 2 1 PAP2 superfamily MerC PF03203.14 ORF41563 - 3.1 8.3 7.3 2 8.9 0.1 2.8 2 1 0 2 2 2 0 MerC mercury resistance protein EF-hand_7 PF13499.6 ORF39531 - 6.9e-21 74.5 7.2 6.3e-12 45.8 2.5 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF39531 - 2.4e-16 58.0 13.5 1.6e-06 27.2 0.3 5.3 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF39531 - 3.1e-14 52.5 11.0 6.1e-10 38.8 1.5 3.8 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF39531 - 1.6e-13 49.4 14.5 0.00026 20.7 0.6 4.5 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF39531 - 3.2e-09 35.9 11.9 1.3e-05 24.5 0.3 4.8 4 1 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF39531 - 0.0098 16.2 2.9 2.1 8.7 0.0 3.5 2 2 1 3 3 3 1 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF39531 - 0.015 15.5 1.2 1.1 9.5 0.1 2.7 2 1 0 2 2 2 0 Dockerin type I domain TerB PF05099.13 ORF39531 - 0.041 13.8 0.1 0.12 12.3 0.0 1.8 2 0 0 2 2 2 0 Tellurite resistance protein TerB CdiI_2 PF18593.1 ORF39531 - 0.11 13.2 1.6 3.4 8.4 0.3 2.5 2 0 0 2 2 2 0 CdiI immunity protein EF-hand_9 PF14658.6 ORF39531 - 0.19 12.1 6.3 14 6.1 0.1 4.1 3 1 1 4 4 4 0 EF-hand domain EF-hand_4 PF12763.7 ORF39531 - 0.64 10.0 4.9 5.9 6.9 0.4 3.3 1 1 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand PQQ PF01011.21 ORF3888 - 8.3e-18 63.4 0.0 4.2e-08 32.7 0.0 2.4 2 0 0 2 2 2 2 PQQ enzyme repeat PQQ_2 PF13360.6 ORF3888 - 2e-06 27.6 0.0 2.7e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 PQQ-like domain PQQ_3 PF13570.6 ORF3888 - 0.25 11.9 8.3 9.7 6.8 2.7 3.2 3 1 0 3 3 3 0 PQQ-like domain Aldedh PF00171.22 ORF37647 - 3.8e-46 157.6 0.0 4.5e-46 157.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Ribosomal_S4e PF00900.20 ORF31611 - 5.2e-33 112.8 0.1 1.4e-32 111.4 0.1 1.8 1 0 0 1 1 1 1 Ribosomal family S4e 40S_S4_C PF16121.5 ORF31611 - 6.3e-16 57.8 0.2 2.6e-15 55.8 0.0 2.0 2 0 0 2 2 2 1 40S ribosomal protein S4 C-terminus RS4NT PF08071.12 ORF31611 - 3.2e-07 30.3 0.1 1e-06 28.7 0.2 1.8 2 0 0 2 2 2 1 RS4NT (NUC023) domain S4 PF01479.25 ORF31611 - 0.0006 19.5 2.1 0.0016 18.1 0.3 2.5 3 0 0 3 3 3 1 S4 domain DUF3857 PF12969.7 ORF31611 - 0.017 15.2 0.0 0.021 14.9 0.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3857) KOW PF00467.29 ORF31611 - 0.022 14.7 0.2 0.022 14.7 0.2 2.0 2 0 0 2 2 2 0 KOW motif Sipho_tail PF05709.11 ORF31611 - 0.073 12.5 0.2 0.12 11.8 0.2 1.4 1 0 0 1 1 1 0 Phage tail protein Metallophos PF00149.28 ORF28646 - 3.2e-25 89.9 0.0 4e-25 89.5 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase AAT PF03417.16 ORF27556 - 0.061 13.0 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase O-FucT PF10250.9 ORF27430 - 1.8e-16 60.8 0.0 2e-16 60.6 0.0 1.1 1 0 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase baeRF_family2 PF18844.1 ORF27430 - 0.027 14.5 0.2 0.054 13.6 0.2 1.5 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 Peptidase_C1 PF00112.23 ORF22036 - 2.4e-05 24.5 0.0 0.00028 21.0 0.0 2.1 1 1 1 2 2 2 1 Papain family cysteine protease YjeJ PF15922.5 ORF19897 - 2.3e-131 437.2 3.5 2.6e-131 437.0 3.5 1.0 1 0 0 1 1 1 1 YjeJ-like DUF2489 PF10675.9 ORF19897 - 0.084 12.8 2.4 1.2 9.1 0.1 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2489) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks71.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks71.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks71.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks71.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:13:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Dickkopf_N PF04706.12 ORF16722 - 0.00014 22.3 14.6 0.00014 22.3 14.6 2.1 2 0 0 2 2 2 1 Dickkopf N-terminal cysteine-rich region EB PF01683.18 ORF16722 - 0.033 14.5 9.7 0.033 14.5 9.7 2.8 2 1 1 3 3 3 0 EB module DUF3860 PF12976.7 ORF16530 - 0.024 14.6 0.2 0.076 13.0 0.1 2.0 1 1 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3860) DUF3379 PF11859.8 ORF1575 - 0.045 13.1 0.1 0.075 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) DUF3094 PF11293.8 ORF1575 - 1.6 8.5 5.2 1.2 8.9 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) LAM_C PF12544.8 ORF13330 - 0.021 15.0 3.4 0.021 15.0 3.4 2.6 2 1 1 3 3 3 0 Lysine-2,3-aminomutase DUF4633 PF15464.6 ORF13330 - 0.1 12.8 2.1 1 9.5 0.3 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4633) GHMP_kinases_N PF00288.26 ORF110668 - 2.1e-07 31.1 0.0 3.9e-07 30.2 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain TPR_2 PF07719.17 ORF108407 - 1.3e-26 90.5 5.4 1.1e-05 25.2 0.3 5.5 5 1 0 5 5 5 5 Tetratricopeptide repeat TPR_1 PF00515.28 ORF108407 - 2.1e-22 78.0 3.7 1.3e-06 28.0 0.2 5.5 5 1 0 5 5 5 5 Tetratricopeptide repeat TPR_11 PF13414.6 ORF108407 - 7.3e-22 76.8 1.7 7.6e-05 22.3 0.0 5.2 2 1 3 5 5 5 5 TPR repeat TPR_8 PF13181.6 ORF108407 - 1.2e-17 62.6 3.8 0.00025 21.0 0.1 5.6 6 0 0 6 6 5 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF108407 - 7.8e-17 61.6 11.7 4.6e-07 30.3 0.2 3.6 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 ORF108407 - 5.3e-15 54.8 9.9 0.003 18.3 0.1 5.4 2 1 3 5 5 5 4 Tetratricopeptide repeat TPR_16 PF13432.6 ORF108407 - 1.2e-14 54.6 8.2 8e-08 32.8 0.4 4.3 3 1 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 ORF108407 - 7e-12 45.3 13.0 6.7e-06 26.2 0.7 3.5 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.6 ORF108407 - 1.5e-11 43.8 1.9 0.22 12.0 0.0 4.8 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF108407 - 1.8e-11 43.2 1.4 0.044 13.8 0.0 4.3 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF108407 - 4.1e-10 39.8 6.1 0.00021 21.5 0.5 4.7 3 2 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF108407 - 5.5e-09 36.1 5.6 0.11 13.2 0.0 5.1 5 1 0 5 5 5 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF108407 - 7.7e-07 29.3 1.3 9.4e-05 22.6 0.1 2.5 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 BTAD PF03704.17 ORF108407 - 0.012 16.1 7.1 0.014 15.8 2.9 2.9 1 1 1 2 2 2 0 Bacterial transcriptional activator domain TPR_15 PF13429.6 ORF108407 - 0.016 14.5 2.8 0.33 10.1 0.0 2.9 1 1 2 3 3 3 0 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 ORF108407 - 0.091 12.4 0.3 0.48 10.1 0.3 2.0 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) SHNi-TPR PF10516.9 ORF108407 - 0.11 11.9 2.2 13 5.4 0.1 3.1 3 0 0 3 3 3 0 SHNi-TPR TPR_3 PF07720.12 ORF108407 - 0.14 12.2 5.8 2.3 8.3 0.6 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF108407 - 0.18 11.8 6.1 42 4.2 0.2 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF108407 - 0.23 11.6 1.0 3.8 7.6 0.1 2.7 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 5 TPR_21 PF09976.9 ORF108407 - 0.24 11.1 5.8 2.7 7.7 3.1 2.8 2 1 0 2 2 2 0 Tetratricopeptide repeat-like domain Xan_ur_permease PF00860.20 ORF10682 - 1.6e-23 83.1 5.4 1.6e-23 83.1 5.4 1.5 2 0 0 2 2 2 1 Permease family YdjC PF04794.12 ORF10630 - 6.6e-58 196.5 0.0 7.5e-58 196.3 0.0 1.0 1 0 0 1 1 1 1 YdjC-like protein DUF1298 PF06974.13 ORF102586 - 1.7e-16 60.5 0.1 3.1e-16 59.6 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) JmjC PF02373.22 ORF101889 - 4.9e-07 30.2 0.0 1.2e-06 28.9 0.0 1.6 1 0 0 1 1 1 1 JmjC domain, hydroxylase TPR_14 PF13428.6 ORF101889 - 0.0062 17.3 3.7 1.1 10.2 0.2 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat Cupin_8 PF13621.6 ORF101889 - 0.072 12.8 0.1 0.35 10.5 0.0 1.9 2 0 0 2 2 2 0 Cupin-like domain TPR_19 PF14559.6 ORF101889 - 0.79 10.3 6.0 1.1 9.8 1.8 2.5 1 1 1 2 2 2 0 Tetratricopeptide repeat Cyt-b5 PF00173.28 ORF101670 - 4.3e-19 68.4 0.0 4.5e-18 65.2 0.0 2.1 2 0 0 2 2 2 1 Cytochrome b5-like Heme/Steroid binding domain EFP_N PF08207.12 ORF101670 - 0.047 13.7 0.0 0.075 13.1 0.0 1.3 1 0 0 1 1 1 0 Elongation factor P (EF-P) KOW-like domain SH3BP5 PF05276.14 ORF100466 - 2.2e-24 86.5 10.4 1.4e-11 44.7 0.2 2.9 2 1 0 2 2 2 2 SH3 domain-binding protein 5 (SH3BP5) DUF4407 PF14362.6 ORF100466 - 3.7e-06 26.5 5.7 0.011 15.2 0.2 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4407) DUF948 PF06103.11 ORF100466 - 0.0031 17.7 1.6 7.5 6.9 0.3 3.4 3 1 0 3 3 3 1 Bacterial protein of unknown function (DUF948) TolA_bind_tri PF16331.5 ORF100466 - 0.018 15.1 5.5 0.86 9.7 0.2 3.1 3 0 0 3 3 3 0 TolA binding protein trimerisation DUF2228 PF10228.9 ORF100466 - 0.1 12.3 0.3 0.15 11.8 0.3 1.3 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2228) Cauli_AT PF03233.13 ORF100466 - 0.1 12.5 0.7 0.76 9.7 0.0 2.2 2 1 1 3 3 3 0 Aphid transmission protein Fib_alpha PF08702.10 ORF100466 - 0.18 12.0 1.8 3.1 8.0 1.7 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF724 PF05266.14 ORF100466 - 0.25 11.2 5.5 0.51 10.1 1.6 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF724) WASH-7_C PF14746.6 ORF100466 - 0.49 10.1 4.2 13 5.4 0.1 3.0 2 1 1 3 3 3 0 WASH complex subunit 7, C-terminal Lebercilin PF15619.6 ORF100466 - 1 9.0 13.4 5.5 6.6 6.0 3.0 2 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease COG2 PF06148.11 ORF100466 - 1 9.4 8.2 2.6 8.1 0.2 3.2 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 TSNAXIP1_N PF15739.5 ORF100466 - 1.9 8.9 7.8 2.4 8.6 3.9 2.9 2 1 0 2 2 2 0 Translin-associated factor X-interacting N-terminus Filament PF00038.21 ORF100466 - 2.8 7.4 10.4 3.1 7.3 4.1 2.8 1 1 0 2 2 2 0 Intermediate filament protein Syntaxin-6_N PF09177.11 ORF100466 - 3.2 8.4 7.4 7.4 7.2 3.4 3.0 2 2 0 2 2 2 0 Syntaxin 6, N-terminal LPP PF04728.13 ORF100466 - 4.1 7.9 7.1 5.6 7.4 0.3 3.4 3 0 0 3 3 3 0 Lipoprotein leucine-zipper TPR_MLP1_2 PF07926.12 ORF100466 - 6 7.0 18.6 6.5 6.8 6.0 3.8 3 2 0 3 3 3 0 TPR/MLP1/MLP2-like protein Response_reg PF00072.24 NODE_29218_length_742_cov_4.026874_g23058_i0reverse_frame_1 - 8.7e-20 71.0 0.0 3.7e-19 69.0 0.0 1.8 2 0 0 2 2 2 1 Response regulator receiver domain CitT PF12431.8 NODE_29218_length_742_cov_4.026874_g23058_i0reverse_frame_1 - 2.3e-07 31.0 0.0 4e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator BORCS8 PF10167.9 NODE_29166_length_743_cov_106.362994_g23015_i0reverse_frame_1 - 0.029 14.3 3.0 0.41 10.6 1.2 2.4 1 1 1 2 2 2 0 BLOC-1-related complex sub-unit 8 Bac_RepA_C PF18008.1 NODE_29143_length_743_cov_559.001412_g19017_i1reverse_frame_1 - 0.059 13.7 2.4 2.9 8.3 0.1 2.5 2 0 0 2 2 2 0 Replication initiator protein A C-terminal domain Asp PF00026.23 NODE_29140_length_743_cov_783.231638_g22994_i0forward_frame_1 - 1.7e-22 80.3 0.2 2.3e-22 79.9 0.2 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_29140_length_743_cov_783.231638_g22994_i0forward_frame_1 - 0.0018 18.5 2.6 0.31 11.3 0.1 3.1 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 NODE_29140_length_743_cov_783.231638_g22994_i0forward_frame_1 - 0.014 16.0 0.1 0.94 10.2 0.0 2.8 3 0 0 3 3 3 0 Aspartyl protease gag-asp_proteas PF13975.6 NODE_29140_length_743_cov_783.231638_g22994_i0forward_frame_1 - 0.052 14.1 0.0 0.55 10.8 0.0 2.4 3 0 0 3 3 3 0 gag-polyprotein putative aspartyl protease DUF908 PF06012.12 NODE_29122_length_744_cov_83.528914_g22977_i0reverse_frame_1 - 0.012 15.0 0.5 0.016 14.6 0.5 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) DUF5453 PF17534.2 NODE_29122_length_744_cov_83.528914_g22977_i0reverse_frame_1 - 0.057 13.4 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5453) Glycoprot_B_PH2 PF17417.2 NODE_29122_length_744_cov_83.528914_g22977_i0reverse_frame_1 - 0.094 13.1 0.7 0.41 11.0 0.1 2.0 2 0 0 2 2 2 0 Herpesvirus Glycoprotein B PH-like domain PSII_Ycf12 PF05969.11 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_1 - 1 9.4 13.0 47 4.1 0.2 4.4 4 0 0 4 4 4 0 Photosystem II complex subunit Ycf12 BT1 PF03092.16 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_1 - 1.2 7.3 5.8 6.7 4.8 0.4 3.1 2 1 2 4 4 4 0 BT1 family Arena_ncap_C PF17290.2 NODE_29082_length_744_cov_1203.918195_g22941_i0forward_frame_1 - 0.012 14.9 0.5 0.024 14.0 0.5 1.4 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain TrkA_N PF02254.18 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 1.4e-30 106.0 0.1 1.8e-30 105.6 0.1 1.2 1 0 0 1 1 1 1 TrkA-N domain Methyltr_RsmB-F PF01189.17 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 4.3e-30 104.8 0.0 3e-29 102.1 0.0 1.9 2 0 0 2 2 2 1 16S rRNA methyltransferase RsmB/F F420_oxidored PF03807.17 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 3.7e-05 24.2 0.1 8.7e-05 23.0 0.1 1.7 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.00044 20.6 0.0 0.00076 19.9 0.0 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.0007 19.7 0.0 0.0009 19.3 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.00086 18.7 0.1 0.0011 18.3 0.1 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.00088 19.5 0.1 0.0013 19.0 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain UDPG_MGDP_dh_N PF03721.14 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.001 18.7 0.0 0.0019 17.8 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.0017 18.0 0.0 0.0026 17.4 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.0096 16.1 0.0 0.018 15.2 0.0 1.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.015 15.2 0.1 0.02 14.8 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.04 14.5 0.1 0.071 13.7 0.1 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_10 PF13460.6 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.054 13.4 0.3 0.075 12.9 0.3 1.2 1 0 0 1 1 1 0 NAD(P)H-binding XdhC_C PF13478.6 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.082 13.4 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 XdhC Rossmann domain DUF1188 PF06690.11 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.085 12.4 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Ras PF00071.22 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_2 - 1e-26 93.5 0.2 1.3e-26 93.1 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_2 - 1.2e-09 38.4 0.1 2.2e-09 37.5 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_2 - 0.00078 18.9 0.1 0.0011 18.5 0.1 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 NODE_29071_length_745_cov_75.442254_g22932_i0reverse_frame_2 - 0.0045 16.6 0.0 0.0074 15.8 0.0 1.3 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Ank_2 PF12796.7 NODE_29053_length_745_cov_189.387324_g22917_i0reverse_frame_3 - 1.2e-39 134.8 0.7 4.6e-14 52.8 0.1 3.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_29053_length_745_cov_189.387324_g22917_i0reverse_frame_3 - 1.4e-32 110.7 2.4 1.6e-05 25.1 0.0 6.2 6 0 0 6 6 6 6 Ankyrin repeat Ank_3 PF13606.6 NODE_29053_length_745_cov_189.387324_g22917_i0reverse_frame_3 - 1.6e-30 101.7 0.4 2.4e-06 27.4 0.0 6.3 6 0 0 6 6 6 5 Ankyrin repeat Ank_4 PF13637.6 NODE_29053_length_745_cov_189.387324_g22917_i0reverse_frame_3 - 1.4e-29 102.1 0.9 4.6e-08 33.5 0.0 5.1 3 2 2 5 5 5 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_29053_length_745_cov_189.387324_g22917_i0reverse_frame_3 - 1.5e-29 101.7 1.5 4.2e-09 36.5 0.0 5.9 2 1 4 6 6 6 4 Ankyrin repeats (many copies) PEGA PF08308.11 NODE_29053_length_745_cov_189.387324_g22917_i0reverse_frame_3 - 0.0003 20.6 0.1 14 5.6 0.0 4.8 5 0 0 5 5 5 1 PEGA domain DUF2384 PF09722.10 NODE_29053_length_745_cov_189.387324_g22917_i0reverse_frame_3 - 0.0017 18.4 0.1 7.8 6.6 0.1 4.4 6 0 0 6 6 6 1 Protein of unknown function (DUF2384) VWA_3_C PF18571.1 NODE_29053_length_745_cov_189.387324_g22917_i0reverse_frame_3 - 0.0051 16.6 0.1 3.1 7.8 0.1 3.5 4 0 0 4 4 4 1 von Willebrand factor type A C-terminal domain DUF3151 PF11349.8 NODE_29053_length_745_cov_189.387324_g22917_i0reverse_frame_3 - 0.0075 16.4 0.6 1.1 9.3 0.0 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF3151) Peptidase_S68 PF10461.9 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_2 - 0.03 14.5 1.7 0.17 12.1 1.7 2.4 1 0 0 1 1 1 0 Peptidase S68 DUF2738 PF10927.8 NODE_29048_length_745_cov_249.611268_g22914_i0forward_frame_2 - 0.04 13.0 0.0 0.054 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2738) DUF1361 PF07099.11 NODE_29044_length_745_cov_356.195775_g22910_i0reverse_frame_3 - 0.071 13.1 0.0 0.21 11.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1361) Anemone_cytotox PF06369.12 NODE_29044_length_745_cov_356.195775_g22910_i0reverse_frame_3 - 0.1 12.2 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Sea anemone cytotoxic protein Orf78 PF06024.12 NODE_29044_length_745_cov_356.195775_g22910_i0reverse_frame_3 - 0.14 12.5 2.4 3.7 7.9 0.9 2.3 1 1 0 2 2 2 0 Orf78 (ac78) Kei1 PF08552.11 NODE_29044_length_745_cov_356.195775_g22910_i0reverse_frame_3 - 0.79 9.6 3.5 1.2 9.0 0.0 2.0 1 1 1 2 2 2 0 Inositolphosphorylceramide synthase subunit Kei1 CLN3 PF02487.17 NODE_29044_length_745_cov_356.195775_g22910_i0reverse_frame_3 - 5.4 6.0 6.6 0.85 8.6 0.1 2.0 1 1 1 2 2 2 0 CLN3 protein Rdx PF10262.9 NODE_29027_length_745_cov_9890.956338_g21013_i3reverse_frame_3 - 6.7e-07 29.4 0.0 1.4e-06 28.3 0.0 1.5 1 0 0 1 1 1 1 Rdx family Polysacc_syn_2C PF08485.10 NODE_29015_length_746_cov_99.001406_g22888_i0forward_frame_3 - 0.13 11.9 0.1 0.13 11.9 0.1 2.9 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal TBCC PF07986.12 NODE_28978_length_747_cov_100.612360_g22856_i0forward_frame_3 - 4.6e-29 100.6 0.0 5.9e-29 100.2 0.0 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor C MRP-S34 PF16053.5 NODE_28978_length_747_cov_100.612360_g22856_i0forward_frame_3 - 0.041 13.5 0.2 0.061 13.0 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S34 HPIP_like PF18524.1 NODE_28965_length_747_cov_140.421348_g22844_i0reverse_frame_3 - 0.69 9.7 4.3 6.5 6.6 0.0 3.4 4 0 0 4 4 4 0 High potential iron-sulfur protein like RCC1_2 PF13540.6 NODE_28965_length_747_cov_140.421348_g22844_i0reverse_frame_2 - 2.7e-10 39.8 15.4 0.7 9.8 0.1 6.4 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat bPH_2 PF03703.14 NODE_28965_length_747_cov_140.421348_g22844_i0reverse_frame_2 - 0.062 13.5 0.7 7.5 6.8 0.0 3.0 2 1 1 3 3 3 0 Bacterial PH domain DUF4984 PF16372.5 NODE_28965_length_747_cov_140.421348_g22844_i0reverse_frame_2 - 0.071 13.0 0.5 54 3.7 0.0 3.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4984) MFMR_assoc PF16596.5 NODE_28965_length_747_cov_140.421348_g22844_i0forward_frame_3 - 0.12 12.8 0.6 28 5.2 0.1 3.8 4 1 1 5 5 5 0 Disordered region downstream of MFMR PDE6_gamma PF04868.12 NODE_28965_length_747_cov_140.421348_g22844_i0forward_frame_2 - 0.0047 17.1 0.7 0.34 11.2 0.0 3.2 3 0 0 3 3 3 1 Retinal cGMP phosphodiesterase, gamma subunit Ins_beta PF03488.14 NODE_28965_length_747_cov_140.421348_g22844_i0forward_frame_2 - 0.03 14.3 16.9 6.5 6.8 0.4 5.2 5 0 0 5 5 5 0 Nematode insulin-related peptide beta type Phe_ZIP PF08916.11 NODE_28965_length_747_cov_140.421348_g22844_i0forward_frame_2 - 0.12 13.1 12.2 22 5.8 0.0 5.2 4 2 1 5 5 5 0 Phenylalanine zipper Ras PF00071.22 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_3 - 3.3e-21 75.6 0.1 4.8e-21 75.0 0.1 1.3 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_3 - 7.9e-12 45.5 0.1 1.4e-11 44.7 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_3 - 0.00043 19.8 0.1 0.00074 19.0 0.1 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_2 - 3.6e-10 39.7 0.1 8.5e-06 25.5 0.0 2.2 2 0 0 2 2 2 2 Ras family Roc PF08477.13 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_2 - 0.005 17.1 0.0 0.034 14.3 0.0 2.2 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_2 - 0.0089 16.4 0.0 0.033 14.6 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain Sigma54_activat PF00158.26 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_2 - 0.01 15.5 0.0 0.019 14.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_2 - 0.016 14.7 0.0 0.028 13.9 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_2 - 0.023 14.6 0.0 0.11 12.4 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase TniB PF05621.11 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_2 - 0.081 12.3 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein MCM PF00493.23 NODE_28959_length_747_cov_260.879213_g22838_i0reverse_frame_2 - 0.086 11.9 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain Rhomboid PF01694.22 ORF98804 - 1.5e-31 109.5 18.3 1.5e-31 109.5 18.3 2.2 2 0 0 2 2 2 1 Rhomboid family Aldedh PF00171.22 ORF91277 - 4e-41 141.0 0.2 4.4e-41 140.9 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Interferon PF00143.19 ORF91277 - 0.022 14.9 1.2 0.032 14.4 1.2 1.2 1 0 0 1 1 1 0 Interferon alpha/beta domain Cytochrom_B562 PF07361.11 ORF91277 - 0.024 15.3 0.7 0.057 14.1 0.6 1.7 1 1 0 1 1 1 0 Cytochrome b562 Spore_YpjB PF09577.10 ORF91277 - 0.059 13.2 1.4 0.13 12.1 1.4 1.6 1 1 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) Peptidase_S46 PF10459.9 ORF91277 - 0.12 11.0 0.4 0.14 10.8 0.4 1.1 1 0 0 1 1 1 0 Peptidase S46 Ank_2 PF12796.7 ORF88214 - 9.5e-39 131.9 0.4 1.2e-13 51.5 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF88214 - 2.8e-33 113.9 0.2 9.5e-11 42.0 0.0 3.8 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF88214 - 1.5e-22 79.3 1.4 2.7e-05 24.4 0.0 6.0 2 1 4 6 6 6 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF88214 - 1e-18 65.4 0.4 0.012 16.1 0.0 6.3 7 0 0 7 7 7 4 Ankyrin repeat Ank PF00023.30 ORF88214 - 2.7e-18 65.5 0.9 0.016 15.6 0.0 5.5 6 0 0 6 6 6 4 Ankyrin repeat RRM_1 PF00076.22 ORF84231 - 1.3e-12 47.4 0.1 1.9e-12 46.8 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF84231 - 1e-11 44.3 16.2 1.1e-05 25.3 5.3 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF84231 - 3.1e-05 23.6 17.4 0.0068 16.1 5.7 2.4 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF84231 - 0.0025 17.8 15.0 0.025 14.5 7.9 2.4 1 1 1 2 2 2 2 Zinc knuckle Limkain-b1 PF11608.8 ORF84231 - 0.0025 17.9 0.0 0.0053 16.8 0.0 1.5 1 0 0 1 1 1 1 Limkain b1 RRM_3 PF08777.11 ORF84231 - 0.0072 16.3 0.3 0.016 15.3 0.3 1.5 1 0 0 1 1 1 1 RNA binding motif ProRS-C_1 PF09180.11 ORF84231 - 0.011 15.9 1.1 0.015 15.5 0.1 1.6 2 0 0 2 2 2 0 Prolyl-tRNA synthetase, C-terminal zf-CCHC_4 PF14392.6 ORF84231 - 0.015 15.0 8.0 0.34 10.7 1.3 2.5 2 0 0 2 2 2 0 Zinc knuckle Nup35_RRM_2 PF14605.6 ORF84231 - 0.019 15.0 0.1 0.031 14.3 0.1 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 ORF84231 - 0.022 14.9 0.0 0.038 14.1 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif RNA_bind PF08675.11 ORF84231 - 0.046 13.7 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 RNA binding domain DbpA PF03880.15 ORF84231 - 0.065 13.2 0.4 0.11 12.5 0.4 1.4 1 0 0 1 1 1 0 DbpA RNA binding domain zf-CCHC_2 PF13696.6 ORF84231 - 2.7 7.9 18.2 5.8 6.8 4.9 2.4 2 0 0 2 2 2 0 Zinc knuckle DUF2950 PF11453.8 ORF82993 - 0.029 13.6 0.0 0.046 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2950) PG_binding_2 PF08823.11 ORF82993 - 0.074 13.4 0.0 0.64 10.4 0.0 2.4 3 0 0 3 3 3 0 Putative peptidoglycan binding domain YceG PF02618.16 ORF80584 - 6.7e-68 229.2 0.0 7.5e-68 229.1 0.0 1.0 1 0 0 1 1 1 1 YceG-like family RRM_1 PF00076.22 ORF79626 - 1.3e-12 47.4 0.1 1.9e-12 46.8 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF79626 - 1e-11 44.3 16.2 1.1e-05 25.3 5.3 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF79626 - 3.1e-05 23.6 17.4 0.0068 16.1 5.7 2.4 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF79626 - 0.0025 17.8 15.0 0.025 14.5 7.9 2.4 1 1 1 2 2 2 2 Zinc knuckle Limkain-b1 PF11608.8 ORF79626 - 0.0025 17.9 0.0 0.0053 16.8 0.0 1.5 1 0 0 1 1 1 1 Limkain b1 RRM_3 PF08777.11 ORF79626 - 0.0072 16.3 0.3 0.016 15.3 0.3 1.5 1 0 0 1 1 1 1 RNA binding motif ProRS-C_1 PF09180.11 ORF79626 - 0.011 15.9 1.1 0.015 15.5 0.1 1.6 2 0 0 2 2 2 0 Prolyl-tRNA synthetase, C-terminal zf-CCHC_4 PF14392.6 ORF79626 - 0.015 15.0 8.0 0.34 10.7 1.3 2.5 2 0 0 2 2 2 0 Zinc knuckle Nup35_RRM_2 PF14605.6 ORF79626 - 0.019 15.0 0.1 0.031 14.3 0.1 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 ORF79626 - 0.022 14.9 0.0 0.038 14.1 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif RNA_bind PF08675.11 ORF79626 - 0.046 13.7 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 RNA binding domain DbpA PF03880.15 ORF79626 - 0.065 13.2 0.4 0.11 12.5 0.4 1.4 1 0 0 1 1 1 0 DbpA RNA binding domain zf-CCHC_2 PF13696.6 ORF79626 - 2.7 7.9 18.2 5.8 6.8 4.9 2.4 2 0 0 2 2 2 0 Zinc knuckle APG6_N PF17675.1 ORF79209 - 0.0086 16.6 8.7 0.0086 16.6 8.7 3.1 2 1 1 3 3 3 1 Apg6 coiled-coil region Csm1_N PF18504.1 ORF79209 - 0.024 15.0 1.3 0.024 15.0 1.3 4.9 1 1 4 5 5 5 0 Csm1 N-terminal domain UPF0242 PF06785.11 ORF79209 - 0.22 11.6 29.4 0.53 10.4 1.8 2.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus bZIP_1 PF00170.21 ORF79209 - 0.26 11.4 26.9 5.7 7.1 2.9 4.5 3 1 1 4 4 4 0 bZIP transcription factor FlaC_arch PF05377.11 ORF79209 - 0.6 10.6 22.4 0.63 10.5 1.9 4.7 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) FlxA PF14282.6 ORF79209 - 1.6 8.8 20.5 0.54 10.3 3.4 3.8 2 2 1 3 3 3 0 FlxA-like protein DUF4407 PF14362.6 ORF79209 - 1.6 8.0 13.8 6.9 5.9 13.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4790 PF16037.5 ORF79209 - 1.8 9.1 7.4 0.26 11.8 1.8 2.5 2 2 2 4 4 4 0 Domain of unknown function (DUF4790) DUF1664 PF07889.12 ORF79209 - 7.6 6.6 20.1 5.3 7.1 5.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) RCC1_2 PF13540.6 ORF78924 - 6.9e-08 32.1 8.9 0.053 13.3 0.2 5.3 5 0 0 5 5 5 3 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 ORF78924 - 0.00073 20.0 0.3 7.8 7.0 0.0 4.5 3 1 2 5 5 5 2 Spectrin repeat Cyclophil_like PF04126.13 ORF78924 - 0.0035 17.1 0.1 0.11 12.3 0.1 2.1 2 0 0 2 2 2 1 Cyclophilin-like PH_TFIIH PF08567.11 ORF78924 - 0.15 12.4 2.7 27 5.2 0.0 3.9 3 1 2 5 5 5 0 TFIIH p62 subunit, N-terminal domain Cerato-platanin PF07249.12 ORF78924 - 0.2 11.8 6.7 4.6 7.4 0.3 3.3 1 1 1 3 3 3 0 Cerato-platanin DUF4687 PF15747.5 ORF78924 - 3 8.3 8.4 12 6.4 0.2 3.6 1 1 3 4 4 4 0 Domain of unknown function (DUF4687) Glyco_transf_7C PF02709.14 ORF77251 - 3.6e-07 29.7 0.1 6.2e-07 29.0 0.1 1.4 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Glyco_tranf_2_3 PF13641.6 ORF77251 - 0.056 13.3 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 Ank_2 PF12796.7 ORF76725 - 5.2e-38 129.5 1.3 1.9e-16 60.4 0.2 3.8 1 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF76725 - 5.6e-30 103.3 4.2 6.2e-08 33.0 0.1 6.1 2 2 5 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF76725 - 7.7e-29 96.5 3.6 0.0024 18.2 0.0 8.0 8 0 0 8 8 8 6 Ankyrin repeat Ank PF00023.30 ORF76725 - 7.2e-25 86.3 10.9 0.0023 18.3 0.0 7.8 8 0 0 8 8 8 7 Ankyrin repeat Ank_5 PF13857.6 ORF76725 - 1.8e-21 75.9 11.7 0.0013 19.0 0.1 6.9 2 2 5 7 7 7 7 Ankyrin repeats (many copies) RNA_Me_trans PF04252.13 ORF74816 - 8.1e-45 152.9 0.0 1.7e-44 151.8 0.0 1.5 1 1 0 1 1 1 1 Predicted SAM-dependent RNA methyltransferase Aldedh PF00171.22 ORF74469 - 3.1e-41 141.4 0.5 3.4e-41 141.2 0.5 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DHR-2 PF06920.13 ORF74469 - 0.018 13.7 0.2 0.026 13.2 0.2 1.1 1 0 0 1 1 1 0 Dock homology region 2 HisKA_3 PF07730.13 ORF74295 - 0.076 13.5 0.2 0.45 11.1 0.0 2.3 2 1 1 3 3 3 0 Histidine kinase Sec1 PF00995.23 ORF7243 - 0.001 18.4 5.2 0.0017 17.7 5.2 1.3 1 0 0 1 1 1 1 Sec1 family DLP_helical PF18709.1 ORF7243 - 0.0028 16.9 8.2 0.0037 16.5 8.2 1.1 1 0 0 1 1 1 1 Dynamin-like helical domain DUF3552 PF12072.8 ORF7243 - 0.0092 15.4 13.5 0.0092 15.4 13.5 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF3552) AAA_13 PF13166.6 ORF7243 - 0.019 13.6 8.1 0.027 13.2 8.1 1.1 1 0 0 1 1 1 0 AAA domain FAM76 PF16046.5 ORF7243 - 0.054 12.9 11.3 0.044 13.1 10.1 1.4 1 1 0 1 1 1 0 FAM76 protein YtxH PF12732.7 ORF7243 - 0.25 11.9 0.3 0.25 11.9 0.3 2.0 2 0 0 2 2 2 0 YtxH-like protein Exonuc_VII_L PF02601.15 ORF7243 - 0.44 10.1 4.9 0.56 9.7 4.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit TMPIT PF07851.13 ORF7243 - 1.2 8.4 10.3 0.44 9.7 6.4 1.8 1 1 1 2 2 2 0 TMPIT-like protein Fzo_mitofusin PF04799.13 ORF7243 - 2 7.9 8.3 0.15 11.6 2.3 1.8 1 1 1 2 2 2 0 fzo-like conserved region DUF4407 PF14362.6 ORF7243 - 4.1 6.7 7.9 5.6 6.2 7.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Aldedh PF00171.22 ORF71731 - 2.1e-41 141.9 0.2 2.3e-41 141.8 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Interferon PF00143.19 ORF71731 - 0.022 14.9 1.2 0.032 14.4 1.2 1.2 1 0 0 1 1 1 0 Interferon alpha/beta domain Cytochrom_B562 PF07361.11 ORF71731 - 0.024 15.3 0.7 0.057 14.1 0.6 1.7 1 1 0 1 1 1 0 Cytochrome b562 Spore_YpjB PF09577.10 ORF71731 - 0.058 13.2 1.4 0.13 12.1 1.4 1.6 1 1 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) Peptidase_S46 PF10459.9 ORF71731 - 0.12 11.0 0.4 0.14 10.8 0.4 1.1 1 0 0 1 1 1 0 Peptidase S46 APG6_N PF17675.1 ORF70595 - 0.0086 16.6 8.7 0.0086 16.6 8.7 3.1 2 1 1 3 3 3 1 Apg6 coiled-coil region Csm1_N PF18504.1 ORF70595 - 0.024 15.0 1.3 0.024 15.0 1.3 4.9 1 1 4 5 5 5 0 Csm1 N-terminal domain UPF0242 PF06785.11 ORF70595 - 0.22 11.6 29.4 0.53 10.4 1.8 2.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus bZIP_1 PF00170.21 ORF70595 - 0.26 11.4 26.9 5.7 7.1 2.9 4.5 3 1 1 4 4 4 0 bZIP transcription factor FlaC_arch PF05377.11 ORF70595 - 0.6 10.6 22.4 0.63 10.5 1.9 4.7 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) FlxA PF14282.6 ORF70595 - 1.6 8.8 20.5 0.54 10.3 3.4 3.8 2 2 1 3 3 3 0 FlxA-like protein DUF4407 PF14362.6 ORF70595 - 1.6 8.0 13.8 6.9 5.9 13.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4790 PF16037.5 ORF70595 - 1.8 9.1 7.4 0.26 11.8 1.8 2.5 2 2 2 4 4 4 0 Domain of unknown function (DUF4790) DUF1664 PF07889.12 ORF70595 - 7.6 6.6 20.1 5.3 7.1 5.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DUF4116 PF13475.6 ORF69431 - 5e-64 211.8 0.0 5.3e-14 51.7 0.0 5.4 3 2 3 7 7 7 6 Domain of unknown function (DUF4116) adh_short PF00106.25 ORF66469 - 8.7e-54 181.9 0.0 1e-53 181.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF66469 - 9.6e-37 126.8 0.0 1.2e-36 126.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF66469 - 2.2e-12 47.3 0.0 3.1e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF66469 - 4.1e-06 26.5 0.1 1.2e-05 24.9 0.1 2.0 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF66469 - 8.5e-06 25.8 0.0 9.7e-06 25.6 0.0 1.3 1 1 0 1 1 1 1 NAD(P)H-binding F420_oxidored PF03807.17 ORF66469 - 0.00042 20.8 0.0 0.00095 19.7 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Polysacc_synt_2 PF02719.15 ORF66469 - 0.0009 18.5 0.0 0.0023 17.1 0.0 1.6 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein Sacchrp_dh_NADP PF03435.18 ORF66469 - 0.0036 17.6 0.0 0.0053 17.0 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain GDP_Man_Dehyd PF16363.5 ORF66469 - 0.018 14.5 0.0 0.043 13.2 0.0 1.8 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 ORF66469 - 0.025 13.7 0.0 0.042 12.9 0.0 1.4 1 0 0 1 1 1 0 RmlD substrate binding domain NmrA PF05368.13 ORF66469 - 0.03 13.9 0.0 0.042 13.4 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Glyco_hydro_101 PF12905.7 ORF66469 - 0.064 12.7 0.0 0.12 11.8 0.0 1.4 2 0 0 2 2 2 0 Endo-alpha-N-acetylgalactosaminidase ParBc_2 PF08857.11 ORF6195 - 2.4e-18 66.8 0.1 3.5e-18 66.2 0.1 1.2 1 0 0 1 1 1 1 Putative ParB-like nuclease GBP PF02263.19 ORF60916 - 3.5e-47 160.8 0.2 4e-47 160.7 0.2 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain Septin PF00735.18 ORF60916 - 0.027 13.8 0.0 0.038 13.3 0.0 1.4 1 0 0 1 1 1 0 Septin MMR_HSR1 PF01926.23 ORF60916 - 0.032 14.3 0.1 0.083 13.0 0.1 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase Epimerase PF01370.21 ORF56723 - 6.4e-22 78.2 0.0 8.4e-22 77.8 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF56723 - 9.3e-20 70.8 0.1 1.1e-19 70.5 0.1 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF56723 - 1.3e-12 47.8 0.1 1.6e-12 47.5 0.1 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF56723 - 4.1e-12 45.8 0.1 1.5e-11 44.0 0.1 1.7 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF56723 - 9.1e-12 45.2 0.0 1.2e-11 44.8 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF56723 - 2.8e-09 36.5 0.1 4.4e-09 35.9 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF56723 - 6.2e-06 26.3 0.1 2.2e-05 24.5 0.1 1.8 1 1 0 1 1 1 1 KR domain adh_short PF00106.25 ORF56723 - 0.00062 19.3 3.0 0.043 13.3 1.8 2.9 2 1 0 2 2 2 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF56723 - 0.0057 16.9 0.3 0.037 14.3 0.3 2.1 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 ORF56723 - 0.029 14.5 0.1 0.091 12.9 0.1 1.8 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus HTH_psq PF05225.16 ORF56723 - 0.084 12.6 0.1 14 5.5 0.0 3.2 4 0 0 4 4 4 0 helix-turn-helix, Psq domain DUF4483 PF14825.6 ORF52324 - 5.1e-34 117.3 0.0 1.4e-33 115.9 0.0 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4483) ATP_sub_h PF10775.9 ORF52324 - 0.1 12.6 0.5 0.24 11.4 0.5 1.6 1 0 0 1 1 1 0 ATP synthase complex subunit h tRNA_edit PF04073.15 ORF51919 - 0.013 15.5 0.1 0.12 12.5 0.1 2.2 1 1 0 1 1 1 0 Aminoacyl-tRNA editing domain DUF2512 PF10710.9 ORF46440 - 0.00039 20.1 5.2 1.7 8.3 0.4 3.1 3 0 0 3 3 3 3 Protein of unknown function (DUF2512) DUF3429 PF11911.8 ORF46440 - 0.016 15.5 6.1 2.8 8.2 0.2 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3429) 4HBT_2 PF13279.6 ORF46440 - 0.031 14.8 0.0 0.15 12.5 0.0 2.0 1 1 0 1 1 1 0 Thioesterase-like superfamily ATP-synt_J PF04911.12 ORF46440 - 0.42 10.2 1.9 34 4.1 0.0 3.0 3 0 0 3 3 3 0 ATP synthase j chain HCV_NS4b PF01001.19 ORF46440 - 0.54 9.8 7.3 14 5.2 0.4 3.0 3 0 0 3 3 3 0 Hepatitis C virus non-structural protein NS4b Exo_endo_phos PF03372.23 ORF46309 - 0.0012 18.4 0.2 0.0042 16.6 0.2 2.0 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family CCDC50_N PF15295.6 ORF43732 - 0.065 13.4 1.6 0.11 12.6 0.3 2.1 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 50 N-terminus DnaJ PF00226.31 ORF4336 - 6.8e-18 64.6 1.4 1.4e-17 63.6 1.4 1.5 1 0 0 1 1 1 1 DnaJ domain UvrD_C PF13361.6 ORF41771 - 3.5e-34 118.7 0.0 4.5e-34 118.4 0.0 1.1 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 ORF41771 - 2.4e-11 43.3 0.1 1.7e-10 40.5 0.0 2.5 2 1 0 2 2 2 1 UvrD-like helicase C-terminal domain Exonuc_V_gamma PF04257.14 ORF41771 - 0.0013 17.1 0.0 0.0016 16.8 0.0 1.1 1 0 0 1 1 1 1 Exodeoxyribonuclease V, gamma subunit Viral_helicase1 PF01443.18 ORF41771 - 0.011 15.5 0.0 0.019 14.7 0.0 1.4 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase UPF0270 PF06794.12 ORF41771 - 0.11 12.6 0.2 0.24 11.5 0.2 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) YjcZ PF13990.6 ORF33930 - 5.5e-124 413.0 4.6 6.1e-124 412.8 4.6 1.0 1 0 0 1 1 1 1 YjcZ-like protein Kinesin PF00225.23 ORF33726 - 3.9e-62 210.1 0.3 4.6e-62 209.9 0.3 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF33726 - 1.2e-27 96.7 0.4 1.8e-27 96.1 0.1 1.4 2 0 0 2 2 2 1 Microtubule binding Oscp1 PF10188.9 ORF32429 - 1.2e-64 217.7 2.2 1.3e-64 217.5 2.2 1.0 1 0 0 1 1 1 1 Organic solute transport protein 1 PKcGMP_CC PF16808.5 ORF31733 - 0.039 13.8 0.5 0.064 13.1 0.5 1.2 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Gal4_dimer PF03902.13 ORF31733 - 0.23 11.6 0.2 0.39 10.9 0.2 1.3 1 0 0 1 1 1 0 Gal4-like dimerisation domain CDT1 PF08839.11 ORF29341 - 0.0013 19.0 0.6 0.0013 19.0 0.6 2.2 2 0 0 2 2 2 1 DNA replication factor CDT1 like HlyIII PF03006.20 ORF29017 - 9.9e-46 156.2 21.5 1.2e-45 155.9 21.5 1.0 1 0 0 1 1 1 1 Haemolysin-III related PIRT PF15099.6 ORF29017 - 0.076 12.6 0.0 0.2 11.3 0.0 1.6 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Presenilin PF01080.17 ORF28441 - 0.64 8.7 4.9 0.77 8.5 4.9 1.2 1 0 0 1 1 1 0 Presenilin Pox_Ag35 PF03286.14 ORF28441 - 1.6 8.5 13.6 2.3 7.9 13.6 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein FAM150 PF15129.6 ORF28441 - 4.7 7.4 8.5 2.4 8.3 5.9 1.8 2 0 0 2 2 2 0 FAM150 family CENP-B_dimeris PF09026.10 ORF28441 - 7 7.1 14.2 2.6 8.5 4.9 2.5 2 0 0 2 2 2 0 Centromere protein B dimerisation domain RCC1_2 PF13540.6 ORF26222 - 6.1e-14 51.4 17.7 0.0037 17.0 0.1 6.3 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF26222 - 0.29 11.2 3.8 54 3.8 0.0 3.6 3 1 1 4 4 4 0 Uncharacterised ACR, YagE family COG1723 PARP PF00644.20 ORF21799 - 2.5e-37 128.4 0.1 4.1e-37 127.7 0.1 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain PARP_reg PF02877.14 ORF21799 - 2e-17 63.6 0.3 3e-17 63.0 0.3 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase, regulatory domain Csm2_III-A PF03750.13 ORF21799 - 0.24 12.2 2.4 0.41 11.5 0.4 2.1 1 1 0 2 2 2 0 Csm2 Type III-A Nuc_sug_transp PF04142.15 ORF17673 - 1e-10 41.3 1.1 1.4e-10 40.9 1.1 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF17673 - 2.2e-07 31.1 3.3 2.2e-07 31.1 3.3 3.0 3 0 0 3 3 3 2 EamA-like transporter family CRT-like PF08627.10 ORF17673 - 1.5e-05 24.1 6.2 1.5e-05 24.1 6.2 1.8 2 0 0 2 2 2 1 CRT-like, chloroquine-resistance transporter-like SLC35F PF06027.12 ORF17673 - 1.7e-05 24.5 7.9 3.3e-05 23.6 7.9 1.4 1 0 0 1 1 1 1 Solute carrier family 35 TMEM234 PF10639.9 ORF17673 - 0.0025 17.8 0.3 0.0053 16.8 0.3 1.6 1 0 0 1 1 1 1 Putative transmembrane family 234 UAA PF08449.11 ORF17673 - 0.0038 16.5 6.2 0.0074 15.5 5.0 1.9 1 1 1 2 2 2 2 UAA transporter family SLAC1 PF03595.17 ORF17673 - 0.21 10.8 11.7 0.096 11.9 8.8 1.8 1 1 1 2 2 2 0 Voltage-dependent anion channel NAD_binding_1 PF00175.21 ORF14938 - 4.4e-20 72.4 0.0 6.2e-20 71.9 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF14938 - 6.6e-08 32.8 0.0 1.9e-07 31.4 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF14938 - 0.0011 19.1 0.0 0.04 14.0 0.0 2.1 1 1 1 2 2 2 1 Ferric reductase NAD binding domain EF-hand_1 PF00036.32 ORF13363 - 3.5e-06 26.2 0.3 7.3e-06 25.2 0.3 1.6 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF13363 - 7.3e-05 22.5 0.3 0.00021 21.1 0.3 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF13363 - 0.0002 21.7 0.2 0.00034 21.0 0.2 1.4 1 0 0 1 1 1 1 EF-hand domain pair Ribosomal_L13e PF01294.18 ORF13363 - 0.00053 19.9 0.4 0.034 14.0 0.0 2.6 1 1 1 2 2 2 1 Ribosomal protein L13e EF-hand_6 PF13405.6 ORF13363 - 0.0064 16.3 0.1 0.021 14.7 0.1 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF13363 - 0.0069 16.3 0.1 0.011 15.6 0.1 1.3 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_5 PF13202.6 ORF13363 - 0.011 15.2 0.2 0.032 13.7 0.2 1.8 1 0 0 1 1 1 0 EF hand Pentapeptide_4 PF13599.6 ORF13363 - 0.15 12.2 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) CTP_transf_3 PF02348.19 ORF110687 - 9.9e-74 248.0 0.0 1.2e-73 247.8 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transf_3 PF12804.7 ORF110687 - 3.7e-14 53.4 0.1 4.4e-14 53.1 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.9 ORF110687 - 0.0013 18.6 0.7 0.0022 17.8 0.7 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) NTP_transferase PF00483.23 ORF110687 - 0.019 14.5 0.0 0.026 14.1 0.0 1.3 1 0 0 1 1 1 0 Nucleotidyl transferase DUF2067 PF09840.9 ORF110687 - 0.16 11.5 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) Polyketide_cyc PF03364.20 ORF108257 - 0.0075 16.5 0.0 0.019 15.2 0.0 1.7 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport CRM1_repeat_2 PF18784.1 ORF108123 - 2.2e-23 81.7 0.6 5.3e-23 80.4 0.3 1.8 1 1 0 1 1 1 1 CRM1 / Exportin repeat 2 CRM1_repeat PF18777.1 ORF108123 - 1.4e-10 40.5 0.1 3e-09 36.2 0.1 2.9 3 0 0 3 3 3 1 Chromosome region maintenance or exportin repeat Ral PF11058.8 ORF108123 - 0.082 12.5 0.2 0.17 11.5 0.2 1.4 1 0 0 1 1 1 0 Antirestriction protein Ral MTS PF05175.14 ORF106954 - 4.7e-18 65.3 0.1 1.9e-16 60.1 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 ORF106954 - 1.6e-13 50.7 0.0 2.1e-13 50.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF106954 - 2.9e-10 40.7 0.0 6.7e-10 39.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 ORF106954 - 2.5e-08 33.7 0.0 3.6e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 ORF106954 - 1.8e-06 27.7 0.0 2.6e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 ORF106954 - 1.2e-05 25.1 0.0 1.9e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_12 PF08242.12 ORF106954 - 2e-05 25.3 0.0 0.00021 22.0 0.0 2.4 3 0 0 3 3 3 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF106954 - 3e-05 23.5 0.0 4.5e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Cons_hypoth95 PF03602.15 ORF106954 - 4.5e-05 23.2 0.0 7.1e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 ORF106954 - 6.7e-05 22.9 0.0 0.00012 22.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 ORF106954 - 8.9e-05 22.3 1.0 0.0004 20.1 1.0 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.6 ORF106954 - 0.00011 22.1 0.0 0.00046 20.1 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF106954 - 0.0012 18.3 0.0 0.0037 16.8 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_11 PF08241.12 ORF106954 - 0.0016 19.0 0.0 0.0042 17.7 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 ORF106954 - 0.0057 16.0 0.0 0.0086 15.4 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain N6_Mtase PF02384.16 ORF106954 - 0.008 15.5 0.0 0.013 14.8 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_16 PF10294.9 ORF106954 - 0.019 14.7 0.0 0.033 13.9 0.0 1.4 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_10 PF05971.12 ORF106954 - 0.021 14.2 0.0 0.027 13.8 0.0 1.1 1 0 0 1 1 1 0 RNA methyltransferase Methyltransf_24 PF13578.6 ORF106954 - 0.049 14.6 0.0 0.64 11.1 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase domain DUF938 PF06080.12 ORF106954 - 0.055 13.2 0.0 0.085 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) N6_N4_Mtase PF01555.18 ORF106954 - 0.055 13.2 0.0 0.28 10.9 0.0 1.9 2 0 0 2 2 2 0 DNA methylase Rsm22 PF09243.10 ORF106954 - 0.13 11.5 0.0 0.21 10.8 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 AviRa PF11599.8 ORF106954 - 0.13 11.7 0.1 0.31 10.5 0.1 1.6 1 1 1 2 2 2 0 RRNA methyltransferase AviRa Methyltr_RsmB-F PF01189.17 ORF106954 - 0.21 11.2 0.0 0.42 10.2 0.0 1.4 2 0 0 2 2 1 0 16S rRNA methyltransferase RsmB/F DUF1270 PF06900.11 ORF104502 - 0.0065 16.8 3.8 0.0065 16.8 3.8 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1270) Aldedh PF00171.22 ORF103907 - 3.1e-41 141.4 0.5 3.4e-41 141.2 0.5 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DHR-2 PF06920.13 ORF103907 - 0.018 13.7 0.2 0.026 13.2 0.2 1.1 1 0 0 1 1 1 0 Dock homology region 2 DUF2475 PF10629.9 ORF103009 - 2.4 8.4 4.7 20 5.5 0.3 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2475) HNH_4 PF13395.6 NODE_29325_length_739_cov_10159.455966_g21013_i4reverse_frame_1 - 0.32 11.0 4.2 0.58 10.1 4.2 1.4 1 0 0 1 1 1 0 HNH endonuclease SR-25 PF10500.9 NODE_29325_length_739_cov_10159.455966_g21013_i4reverse_frame_1 - 0.85 9.2 11.1 1.8 8.1 11.1 1.4 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein vMSA PF00695.19 NODE_29318_length_740_cov_3.221277_g23143_i0forward_frame_1 - 0.031 13.4 2.8 0.034 13.3 2.8 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus RRM_1 PF00076.22 NODE_29311_length_740_cov_78.296454_g23138_i0reverse_frame_1 - 2.5e-12 46.4 0.1 5.8e-12 45.3 0.1 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF2922 PF11148.8 NODE_29300_length_740_cov_137.757447_g23127_i0reverse_frame_1 - 0.11 12.3 0.1 0.21 11.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2922) BLOC1_2 PF10046.9 NODE_29286_length_740_cov_328.902128_g18203_i1forward_frame_1 - 0.00097 19.4 1.6 0.025 14.9 0.5 2.6 2 0 0 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 CCDC-167 PF15188.6 NODE_29279_length_740_cov_959.126241_g23112_i0forward_frame_1 - 0.019 15.3 1.3 0.033 14.5 1.3 1.4 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 RE_MamI PF09567.10 NODE_29252_length_741_cov_95.022663_g23088_i0reverse_frame_1 - 0.24 11.0 0.0 0.34 10.5 0.0 1.2 1 0 0 1 1 1 0 MamI restriction endonuclease Pkinase PF00069.25 NODE_29222_length_742_cov_2.458274_g23062_i0reverse_frame_2 - 1.3e-06 28.0 0.1 1.8e-06 27.5 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_29222_length_742_cov_2.458274_g23062_i0reverse_frame_2 - 0.0023 17.3 0.0 0.003 16.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase YchF-GTPase_C PF06071.13 NODE_29222_length_742_cov_2.458274_g23062_i0reverse_frame_2 - 0.063 13.5 0.3 0.12 12.6 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF933) HATPase_c PF02518.26 NODE_29218_length_742_cov_4.026874_g23058_i0reverse_frame_3 - 0.031 14.8 0.0 0.046 14.2 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIN52 PF10044.9 NODE_29214_length_742_cov_14.132956_g23022_i1forward_frame_3 - 0.11 13.2 4.8 2 9.2 0.1 2.6 3 1 0 3 3 3 0 Retinal tissue protein MUG113 PF13455.6 NODE_29191_length_742_cov_275.056577_g23033_i0reverse_frame_2 - 0.083 13.6 0.1 0.21 12.3 0.1 1.7 2 0 0 2 2 2 0 Meiotically up-regulated gene 113 DUF4636 PF15468.6 NODE_29191_length_742_cov_275.056577_g23033_i0forward_frame_2 - 0.11 12.2 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) BPD_transp_1 PF00528.22 NODE_29180_length_743_cov_2.343220_g23027_i0forward_frame_3 - 3.2e-07 30.2 6.1 6.3e-07 29.3 1.6 2.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF4577 PF15145.6 NODE_29180_length_743_cov_2.343220_g23027_i0forward_frame_3 - 2.4 8.2 4.9 4.4 7.3 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4577) AAA_21 PF13304.6 NODE_29166_length_743_cov_106.362994_g23015_i0reverse_frame_3 - 0.21 11.4 2.1 0.42 10.4 0.1 2.0 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system SF-assemblin PF06705.11 NODE_29143_length_743_cov_559.001412_g19017_i1reverse_frame_3 - 0.0046 16.3 0.1 0.0069 15.8 0.1 1.1 1 0 0 1 1 1 1 SF-assemblin/beta giardin DUF2177 PF09945.9 NODE_29122_length_744_cov_83.528914_g22977_i0forward_frame_2 - 0.12 12.5 0.1 0.12 12.5 0.1 1.6 2 0 0 2 2 2 0 Predicted membrane protein (DUF2177) RCC1_2 PF13540.6 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 2.3e-09 36.8 14.1 0.36 10.7 0.0 5.5 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat ATP-synt_Eps PF04627.13 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 0.00013 21.9 11.3 1.8 8.6 0.1 5.5 6 0 0 6 6 6 2 Mitochondrial ATP synthase epsilon chain Crystall PF00030.19 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 0.00067 19.8 0.6 3.1 8.1 0.0 4.1 3 1 1 4 4 4 1 Beta/Gamma crystallin Apo-CIII PF05778.12 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 0.01 15.5 6.2 25 4.6 0.0 4.4 5 0 0 5 5 5 0 Apolipoprotein CIII (Apo-CIII) DUF4984 PF16372.5 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 0.062 13.2 0.8 49 3.8 0.0 3.9 5 0 0 5 5 5 0 Domain of unknown function (DUF4984) MyTH4 PF00784.17 NODE_29113_length_744_cov_116.495063_g22968_i0forward_frame_3 - 0.046 14.2 6.1 40 4.8 0.1 4.1 4 0 0 4 4 4 0 MyTH4 domain DUF2530 PF10745.9 NODE_29113_length_744_cov_116.495063_g22968_i0forward_frame_3 - 1.2 9.4 12.3 26 5.2 0.2 4.6 4 2 1 5 5 5 0 Protein of unknown function (DUF2530) DUF5408 PF17402.2 NODE_29113_length_744_cov_116.495063_g22968_i0forward_frame_3 - 5.6 6.9 5.1 30 4.6 0.2 3.1 4 0 0 4 4 4 0 Family of unknown function (DUF5408) IL12 PF03039.14 NODE_29113_length_744_cov_116.495063_g22968_i0forward_frame_2 - 0.33 10.2 2.5 6.9 5.9 0.3 2.5 1 1 1 2 2 2 0 Interleukin-12 alpha subunit TMCO5 PF14992.6 NODE_29082_length_744_cov_1203.918195_g22941_i0forward_frame_3 - 0.21 11.2 5.2 0.37 10.3 5.2 1.3 1 0 0 1 1 1 0 TMCO5 family SIT PF15330.6 NODE_29082_length_744_cov_1203.918195_g22941_i0forward_frame_2 - 0.0058 17.1 0.1 0.012 16.0 0.1 1.5 1 0 0 1 1 1 1 SHP2-interacting transmembrane adaptor protein, SIT DUF898 PF05987.13 NODE_29082_length_744_cov_1203.918195_g22941_i0forward_frame_2 - 0.068 12.2 3.4 0.16 11.0 3.5 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF898) SAM_decarbox PF01536.16 ORF99993 - 7.6e-43 146.9 0.0 9e-43 146.6 0.0 1.1 1 0 0 1 1 1 1 Adenosylmethionine decarboxylase DUF4446 PF14584.6 ORF98556 - 0.014 15.4 0.3 0.024 14.7 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF5313 PF17240.2 ORF98556 - 0.019 15.4 0.3 0.036 14.5 0.3 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Retrotrans_gag PF03732.17 ORF98556 - 0.035 14.4 0.6 0.094 13.0 0.3 1.9 2 0 0 2 2 2 0 Retrotransposon gag protein Cadherin_C_2 PF16492.5 ORF98556 - 0.077 13.8 0.4 0.22 12.3 0.2 1.9 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal DUF4834 PF16118.5 ORF98556 - 0.077 14.0 0.1 0.27 12.2 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) DUF305 PF03713.13 ORF94132 - 5.5e-13 49.3 0.2 1.2e-12 48.3 0.1 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF305) NifU_N PF01592.16 ORF94132 - 0.61 10.2 3.1 1.5 9.0 0.1 2.4 2 1 0 3 3 3 0 NifU-like N terminal domain Abhydrolase_2 PF02230.16 ORF93398 - 2.9e-08 33.8 0.0 5.8e-08 32.8 0.0 1.4 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF93398 - 0.019 15.6 2.4 0.013 16.1 1.5 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_3 PF07859.13 ORF93398 - 0.17 11.8 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold U-box PF04564.15 ORF87277 - 1e-11 44.9 0.0 2.3e-11 43.7 0.0 1.6 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF87277 - 0.00046 20.3 0.0 0.00092 19.3 0.0 1.4 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein zf-Nse PF11789.8 ORF87277 - 0.024 14.4 0.0 0.094 12.5 0.0 2.0 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit CSD PF00313.22 ORF86606 - 5.9e-28 96.5 1.0 3.5e-16 58.8 0.1 2.2 2 0 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF86606 - 2.8e-09 36.5 4.2 0.00051 19.7 1.8 3.4 2 1 0 2 2 2 2 Ribonuclease B OB domain DUF2671 PF10877.8 ORF86606 - 0.0027 17.5 0.2 1 9.2 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF2671) DUF3915 PF13054.6 ORF86606 - 0.28 11.2 20.5 0.25 11.3 12.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3915) PRP38_assoc PF12871.7 ORF86606 - 2.9 8.6 56.4 0.2 12.3 8.5 2.6 2 1 0 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term PRP1_N PF06424.12 ORF84804 - 0.35 11.3 5.3 0.1 13.0 2.0 1.8 1 1 1 2 2 2 0 PRP1 splicing factor, N-terminal KAR9 PF08580.10 ORF83847 - 0.096 11.2 6.4 0.12 10.9 6.4 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 CSD PF00313.22 ORF79081 - 1.9e-05 24.4 0.1 3.2e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF79081 - 0.0042 16.7 0.2 0.0091 15.7 0.2 1.5 1 0 0 1 1 1 1 Ribonuclease B OB domain UQ_con PF00179.26 ORF78936 - 2e-07 30.8 0.1 3.2e-07 30.1 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF2670 PF10875.8 ORF78936 - 0.0013 18.9 0.1 0.0022 18.1 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2670) RWD PF05773.22 ORF78936 - 0.035 14.4 0.1 0.067 13.5 0.1 1.5 1 0 0 1 1 1 0 RWD domain PUF PF00806.19 ORF7816 - 9.3e-15 53.4 0.0 0.037 13.7 0.0 5.3 5 0 0 5 5 5 5 Pumilio-family RNA binding repeat CPL PF08144.11 ORF7816 - 0.00044 20.6 0.0 0.0027 18.1 0.0 2.2 1 1 1 2 2 2 1 CPL (NUC119) domain DSPc PF00782.20 ORF77893 - 1.6e-13 50.6 0.0 2.1e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain CDKN3 PF05706.12 ORF77893 - 0.0014 18.3 0.0 0.0022 17.7 0.0 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase PF00102.27 ORF77893 - 0.028 14.0 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF77893 - 0.048 13.8 0.0 0.072 13.2 0.0 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate Cyt-b5 PF00173.28 ORF77808 - 9.6e-16 57.7 0.1 1.6e-15 57.0 0.1 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain MerR PF00376.23 ORF77808 - 0.16 11.8 2.0 2.4 8.0 0.2 2.5 2 0 0 2 2 2 0 MerR family regulatory protein Alpha_TIF PF02232.15 ORF77375 - 0.012 14.7 0.1 0.017 14.3 0.1 1.1 1 0 0 1 1 1 0 Alpha trans-inducing protein (Alpha-TIF) FAS_N PF17828.1 ORF77375 - 0.47 10.5 4.7 0.15 12.1 1.1 1.9 2 0 0 2 2 2 0 N-terminal domain in fatty acid synthase subunit beta LRAT PF04970.13 ORF77375 - 2 8.7 7.7 1.6 9.1 1.7 2.4 1 1 0 2 2 2 0 Lecithin retinol acyltransferase NS3_envE PF02723.14 ORF76570 - 0.64 10.1 9.3 15 5.7 0.0 2.6 2 1 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E DUF4577 PF15145.6 ORF76570 - 3.7 7.6 6.4 3.7 7.6 4.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4577) Lipocalin_2 PF08212.12 ORF75739 - 2.8e-06 27.3 0.0 0.026 14.5 0.0 2.1 2 0 0 2 2 2 2 Lipocalin-like domain Lipocalin PF00061.23 ORF75739 - 0.022 14.9 0.0 0.091 13.0 0.0 1.9 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family Lipocalin_2 PF08212.12 ORF72836 - 2.8e-06 27.3 0.0 0.026 14.5 0.0 2.1 2 0 0 2 2 2 2 Lipocalin-like domain Lipocalin PF00061.23 ORF72836 - 0.022 14.9 0.0 0.091 13.0 0.0 1.9 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family PGK PF00162.19 ORF72106 - 3e-82 276.6 3.3 3.5e-82 276.4 3.3 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF72106 - 0.065 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) Med19 PF10278.9 ORF71156 - 0.01 15.8 2.5 0.01 15.8 2.5 2.4 1 1 1 2 2 2 0 Mediator of RNA pol II transcription subunit 19 Luteo_Vpg PF01659.16 ORF71156 - 0.043 14.1 2.2 8.7 6.7 0.2 2.4 2 0 0 2 2 2 0 Luteovirus putative VPg genome linked protein Adeno_PV PF03910.13 ORF71156 - 0.35 9.5 8.1 0.16 10.7 0.8 2.1 2 0 0 2 2 2 0 Adenovirus minor core protein PV DUF3644 PF12358.8 ORF71156 - 1.2 9.7 5.1 0.49 10.9 1.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3644) SR-25 PF10500.9 ORF71156 - 4.9 6.7 19.9 1.2 8.7 8.3 2.1 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein Zip PF02535.22 ORF69588 - 2.2 7.4 5.7 2.3 7.4 5.7 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter DUF1644 PF07800.12 ORF69588 - 6 6.9 12.5 1.7 8.7 0.7 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1644) Methyltransf_PK PF05891.12 ORF67828 - 1.6e-68 230.5 0.0 2e-68 230.2 0.0 1.0 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Methyltransf_25 PF13649.6 ORF67828 - 9.7e-12 45.4 0.0 2.8e-11 43.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF67828 - 1.5e-10 41.6 0.0 2.4e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF67828 - 7.2e-07 29.9 0.0 1.1e-06 29.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF67828 - 7.3e-05 22.7 0.0 0.00014 21.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF67828 - 7.3e-05 22.6 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF67828 - 0.00027 20.6 0.0 0.00038 20.1 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 ORF67828 - 0.004 16.7 0.0 0.0061 16.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.18 ORF67828 - 0.017 14.4 0.0 0.026 13.8 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain Bin3 PF06859.12 ORF67828 - 0.083 13.5 0.0 0.17 12.5 0.0 1.6 1 0 0 1 1 1 0 Bicoid-interacting protein 3 (Bin3) CMAS PF02353.20 ORF67828 - 0.094 12.0 0.7 0.29 10.4 0.0 1.9 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase RrnaAD PF00398.20 ORF67828 - 0.1 11.6 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Ubie_methyltran PF01209.18 ORF67828 - 0.16 11.3 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family DUF1922 PF09082.10 ORF67165 - 0.0071 16.6 0.0 0.014 15.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1922) Trimer_CC PF08954.11 ORF66873 - 0.017 14.7 1.7 0.017 14.7 1.7 2.5 2 1 0 2 2 2 0 Trimerisation motif NOA36 PF06524.12 ORF66873 - 0.16 11.2 5.2 0.29 10.4 5.2 1.4 1 0 0 1 1 1 0 NOA36 protein DASH_Dad2 PF08654.10 ORF66873 - 0.2 12.1 7.2 0.23 11.9 1.4 2.8 2 1 0 2 2 2 0 DASH complex subunit Dad2 LAGLIDADG_WhiA PF14527.6 ORF66873 - 0.23 11.6 1.8 4.2 7.5 0.1 2.9 2 1 0 2 2 2 0 WhiA LAGLIDADG-like domain DUF2937 PF11157.8 ORF66873 - 0.5 10.1 6.1 1.9 8.2 0.7 3.0 2 2 1 3 3 3 0 Protein of unknown function (DUF2937) RXT2_N PF08595.11 ORF66873 - 0.62 10.1 8.7 0.21 11.6 5.4 1.9 1 1 1 2 2 2 0 RXT2-like, N-terminal Pro-MCH PF05824.12 ORF66873 - 0.68 9.9 4.8 0.42 10.6 0.4 2.4 2 0 0 2 2 2 0 Pro-melanin-concentrating hormone (Pro-MCH) FAM176 PF14851.6 ORF66873 - 0.82 9.3 10.0 0.13 11.9 6.2 1.7 2 0 0 2 2 2 0 FAM176 family CENP-B_dimeris PF09026.10 ORF66873 - 0.97 9.9 12.0 2.6 8.5 12.0 1.7 1 0 0 1 1 1 0 Centromere protein B dimerisation domain PBP1_TM PF14812.6 ORF66873 - 1.1 9.7 5.8 0.25 11.8 1.9 2.0 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal PspB PF06667.12 ORF66873 - 1.7 8.8 11.4 0.75 9.9 0.4 3.3 2 2 2 4 4 4 0 Phage shock protein B Sel1 PF08238.12 ORF65863 - 1.1e-12 48.2 7.0 2.3e-07 31.2 1.3 3.3 3 0 0 3 3 3 2 Sel1 repeat Armet PF10208.9 ORF65863 - 0.025 14.5 0.0 0.04 13.9 0.0 1.2 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding Proteasome PF00227.26 ORF65353 - 1.3e-54 184.6 1.3 1.1e-53 181.6 1.3 2.0 1 1 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF65353 - 3.1e-10 39.5 0.2 5.7e-10 38.7 0.2 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature POT1 PF02765.17 ORF65353 - 0.021 14.7 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 Hamartin PF04388.12 ORF617 - 0.26 9.9 1.9 0.3 9.7 1.9 1.1 1 0 0 1 1 1 0 Hamartin protein DUF4446 PF14584.6 ORF59468 - 0.014 15.4 0.3 0.024 14.7 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF5313 PF17240.2 ORF59468 - 0.019 15.4 0.3 0.036 14.5 0.3 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Retrotrans_gag PF03732.17 ORF59468 - 0.035 14.4 0.6 0.094 13.0 0.3 1.9 2 0 0 2 2 2 0 Retrotransposon gag protein Cadherin_C_2 PF16492.5 ORF59468 - 0.077 13.8 0.4 0.22 12.3 0.2 1.9 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal DUF4834 PF16118.5 ORF59468 - 0.077 14.0 0.1 0.27 12.2 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) MCD_N PF17408.2 ORF59036 - 0.17 12.1 5.8 0.33 11.1 2.0 3.1 2 1 1 3 3 3 0 Malonyl-CoA decarboxylase N-terminal domain Prominin PF05478.11 ORF59036 - 1 7.3 9.4 0.71 7.7 7.9 1.4 2 0 0 2 2 2 0 Prominin V_ATPase_I PF01496.19 ORF59036 - 1.2 6.9 7.1 1.3 6.8 7.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family T2SSF PF00482.23 ORF59036 - 2 8.4 0.0 2 8.4 0.0 3.1 2 1 1 3 3 3 0 Type II secretion system (T2SS), protein F DUF2120 PF09893.9 ORF59036 - 4.3 7.4 5.6 3.5 7.7 1.4 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) Fib_alpha PF08702.10 ORF59036 - 4.3 7.5 7.9 12 6.0 7.7 1.8 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 ORF59036 - 8.8 6.4 9.8 5.4 7.1 4.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF55364 - 2.7 8.0 23.5 1.5e+02 2.4 23.5 2.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus LMBR1 PF04791.16 ORF55364 - 4.9 5.9 9.3 5.6 5.7 9.3 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF724 PF05266.14 ORF55364 - 5.5 6.8 14.8 4.7 7.0 6.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) bZIP_1 PF00170.21 ORF55364 - 9.7 6.4 12.8 0.12 12.5 1.9 2.9 2 1 0 2 2 2 0 bZIP transcription factor 5_nucleotid_C PF02872.18 ORF54549 - 2.5e-29 102.5 0.0 4e-29 101.9 0.0 1.3 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Lipocalin_2 PF08212.12 ORF53457 - 2.8e-06 27.3 0.0 0.026 14.5 0.0 2.1 2 0 0 2 2 2 2 Lipocalin-like domain Lipocalin PF00061.23 ORF53457 - 0.022 14.9 0.0 0.091 13.0 0.0 1.9 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family 14-3-3 PF00244.20 ORF52460 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein 14-3-3 PF00244.20 ORF51441 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein TPP_enzyme_C PF02775.21 ORF5143 - 4.2e-19 68.8 0.0 5.8e-19 68.4 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 3Beta_HSD PF01073.19 ORF50766 - 1.3e-08 34.2 0.0 1.8e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF50766 - 2.4e-08 33.7 0.0 3.4e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF50766 - 0.062 12.5 0.0 0.092 11.9 0.0 1.2 1 0 0 1 1 1 0 Male sterility protein 14-3-3 PF00244.20 ORF50338 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein DHR10 PF18595.1 ORF47151 - 1.6 8.8 13.6 2.6 8.1 11.5 2.0 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain U-box PF04564.15 ORF46958 - 1.7e-07 31.3 0.0 4.1e-07 30.1 0.0 1.7 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 ORF46958 - 0.0016 18.2 0.3 0.028 14.2 0.0 2.6 2 1 1 3 3 3 1 Zinc-finger of the MIZ type in Nse subunit PPDK_N PF01326.19 ORF46958 - 0.023 14.0 0.4 0.033 13.5 0.4 1.3 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RLAN PF14401.6 ORF46958 - 0.041 13.5 0.0 0.059 13.0 0.0 1.4 1 0 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain T3SS_NleG PF06416.12 ORF46958 - 0.1 12.5 0.2 0.42 10.5 0.1 2.0 2 1 0 2 2 2 0 Effector protein NleG ABC_tran_CTD PF16326.5 ORF46958 - 3.1 8.1 7.6 1.3 9.3 0.4 2.8 2 1 0 2 2 2 0 ABC transporter C-terminal domain Ank_2 PF12796.7 ORF46901 - 5.1e-12 46.2 0.1 4.1e-05 24.1 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF46901 - 4.3e-10 39.9 0.0 1.2e-05 25.7 0.0 3.8 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF46901 - 1.2e-09 38.2 0.2 0.00077 19.7 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF46901 - 4.2e-09 36.4 0.1 0.028 14.8 0.0 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF46901 - 3.5e-08 33.1 0.1 1 10.1 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat DHHC PF01529.20 ORF46435 - 6.4e-34 116.9 15.3 9e-34 116.5 15.3 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase Yip1 PF04893.17 ORF46435 - 8.2e-05 22.4 0.5 0.00011 21.9 0.5 1.1 1 0 0 1 1 1 1 Yip1 domain C1_2 PF03107.16 ORF46435 - 8.2 6.8 19.3 0.34 11.3 9.4 2.8 2 1 1 3 3 3 0 C1 domain 14-3-3 PF00244.20 ORF45605 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein NAM-associated PF14303.6 ORF45315 - 0.97 10.1 17.1 1.9 9.2 17.1 1.5 1 1 0 1 1 1 0 No apical meristem-associated C-terminal domain Y_phosphatase PF00102.27 ORF43839 - 6.9e-40 137.1 1.3 8.7e-40 136.7 1.3 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DUF1583 PF07622.11 ORF41640 - 0.2 10.4 0.0 0.27 9.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1583) Matrilin_ccoil PF10393.9 ORF40520 - 0.036 13.9 0.4 6.6 6.7 0.1 2.3 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin Pentapeptide PF00805.22 ORF35772 - 9.8e-13 47.5 18.6 1.6e-07 30.8 3.9 3.7 2 1 1 4 4 4 3 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF35772 - 1.6e-10 41.0 10.7 5.3e-07 29.7 3.6 2.2 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF35772 - 3.3e-06 27.2 24.5 0.0003 20.9 3.5 3.1 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) Cyt-b5 PF00173.28 ORF35532 - 9.6e-16 57.7 0.1 1.6e-15 57.0 0.1 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain MerR PF00376.23 ORF35532 - 0.16 11.8 2.0 2.4 8.0 0.2 2.5 2 0 0 2 2 2 0 MerR family regulatory protein MatE PF01554.18 ORF34712 - 8.2e-14 51.6 6.8 1.2e-13 51.0 6.8 1.3 1 0 0 1 1 1 1 MatE Pentapeptide PF00805.22 ORF34374 - 2e-21 75.2 26.7 1.1e-07 31.3 2.6 5.6 4 1 2 6 6 6 6 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF34374 - 2.4e-12 46.8 20.9 1.5e-05 25.0 3.8 3.5 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF34374 - 5.8e-08 32.8 12.6 0.0078 16.3 1.8 4.9 3 2 2 5 5 5 5 Pentapeptide repeats (9 copies) CfAFP PF05264.11 ORF34374 - 0.01 15.9 2.1 0.098 12.6 0.2 2.3 2 0 0 2 2 2 1 Choristoneura fumiferana antifreeze protein (CfAFP) GDPD PF03009.17 ORF33870 - 5.5e-42 144.3 0.0 6.8e-42 144.0 0.0 1.1 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family GDPD_2 PF13653.6 ORF33870 - 0.00012 22.4 2.1 0.00035 20.9 0.0 2.7 3 0 0 3 3 3 1 Glycerophosphoryl diester phosphodiesterase family Patatin PF01734.22 ORF33657 - 2.6e-07 31.0 0.0 4.6e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase MerR PF00376.23 ORF30796 - 0.019 14.8 0.1 0.034 13.9 0.1 1.4 1 0 0 1 1 1 0 MerR family regulatory protein Peptidase_C37 PF05416.12 ORF29427 - 0.0092 14.6 4.8 0.01 14.4 4.8 1.0 1 0 0 1 1 1 1 Southampton virus-type processing peptidase O-antigen_lig PF13425.6 ORF29427 - 1.1 7.9 13.5 0.035 12.9 7.4 1.5 2 0 0 2 2 2 0 O-antigen ligase like membrane protein DUF4834 PF16118.5 ORF29427 - 8.3 7.4 18.8 0.18 12.8 0.9 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) Cation_ATPase_C PF00689.21 ORF28381 - 7.7e-21 74.6 0.8 2.5e-20 72.9 0.1 1.9 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF28381 - 1e-08 35.8 0.3 7.3e-07 29.7 0.3 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF28381 - 0.00029 20.7 1.9 0.00058 19.7 2.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Lipocalin_2 PF08212.12 ORF26894 - 2.8e-06 27.3 0.0 0.026 14.5 0.0 2.1 2 0 0 2 2 2 2 Lipocalin-like domain Lipocalin PF00061.23 ORF26894 - 0.022 14.9 0.0 0.091 13.0 0.0 1.9 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family NIF3 PF01784.18 ORF26656 - 1.3e-57 195.3 0.0 1.5e-57 195.0 0.0 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) GST_N PF02798.20 ORF24665 - 2.6e-10 40.5 0.0 4.6e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF24665 - 4.8e-10 39.5 0.0 8.3e-10 38.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF24665 - 1.1e-09 38.6 0.0 1.7e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF24665 - 1.2e-07 31.8 0.0 1.8e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF24665 - 9.5e-05 22.6 0.0 0.00015 22.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF24665 - 0.00076 19.4 0.0 0.0014 18.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain zf-CCCH_7 PF18586.1 ORF24665 - 0.0013 19.0 0.3 1.2 9.5 0.0 2.3 2 0 0 2 2 2 2 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 Protoglobin PF11563.8 ORF24665 - 0.061 13.2 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Protoglobin 14-3-3 PF00244.20 ORF20142 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein Gamma_PGA_hydro PF05908.11 ORF19598 - 0.076 12.4 0.2 0.076 12.4 0.2 1.9 2 1 0 2 2 2 0 Poly-gamma-glutamate hydrolase MORN PF02493.20 ORF17788 - 1.3e-27 94.0 56.5 6.2e-09 35.2 2.4 7.9 8 0 0 8 8 8 6 MORN repeat Ank_2 PF12796.7 ORF17116 - 2.1e-42 143.6 1.0 1.3e-15 57.7 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF17116 - 3.8e-31 107.0 5.2 3.5e-09 37.0 0.2 4.8 3 1 2 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF17116 - 5e-31 105.8 8.6 2.5e-05 24.5 0.0 7.1 7 0 0 7 7 7 7 Ankyrin repeat Ank_5 PF13857.6 ORF17116 - 2.7e-29 100.8 6.4 4e-09 36.6 0.2 6.5 2 1 5 7 7 7 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF17116 - 5.4e-29 97.0 1.6 0.00069 19.9 0.0 7.2 7 0 0 7 7 7 7 Ankyrin repeat YlzJ PF14035.6 ORF17116 - 0.023 14.9 0.0 22 5.3 0.0 4.3 5 1 0 5 5 5 0 YlzJ-like protein Band_7 PF01145.25 ORF17058 - 1e-09 38.7 1.3 1e-09 38.7 1.3 1.9 2 0 0 2 2 2 1 SPFH domain / Band 7 family DUF2172 PF09940.9 ORF17058 - 0.11 13.0 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2172) Gly_rich PF12810.7 ORF16941 - 0.81 9.6 15.3 0.061 13.2 9.8 1.7 1 1 1 2 2 2 0 Glycine rich protein ribosomal_L24 PF17136.4 ORF15853 - 7e-14 52.0 0.8 1.6e-13 50.9 0.1 2.0 2 0 0 2 2 2 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 ORF15853 - 0.00014 21.7 2.4 0.00025 20.9 2.4 1.4 1 0 0 1 1 1 1 KOW motif Ank_2 PF12796.7 ORF14690 - 4.6e-08 33.5 0.0 1.6e-06 28.6 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF14690 - 1.8e-06 27.8 0.0 0.0029 18.0 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF14690 - 1.9e-06 28.3 0.0 0.006 17.1 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF14690 - 2.6e-06 27.6 0.0 0.0009 19.5 0.0 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF14690 - 1.6e-05 25.1 0.0 0.009 16.4 0.0 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ribosomal_S5 PF00333.20 ORF14566 - 1.6e-25 88.8 0.1 2.5e-25 88.2 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 ORF14566 - 4.4e-13 48.5 0.2 9.1e-13 47.5 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Abhydro_lipase PF04083.16 ORF14409 - 1.7e-17 62.8 0.0 2.8e-17 62.0 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF14409 - 0.00022 21.0 0.1 0.00031 20.5 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold DEK_C PF08766.11 ORF13839 - 0.0019 18.1 0.0 0.0037 17.1 0.0 1.4 1 0 0 1 1 1 1 DEK C terminal domain Phytochelatin PF05023.14 ORF13760 - 0.0041 16.4 0.0 0.0082 15.4 0.0 1.5 1 0 0 1 1 1 1 Phytochelatin synthase Cyt-b5 PF00173.28 ORF110332 - 9.6e-16 57.7 0.1 1.6e-15 57.0 0.1 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain MerR PF00376.23 ORF110332 - 0.16 11.8 2.0 2.4 8.0 0.2 2.5 2 0 0 2 2 2 0 MerR family regulatory protein Glyco_tran_28_C PF04101.16 ORF109835 - 2.1e-08 34.3 0.0 2.9e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain UDPGT PF00201.18 ORF109835 - 4.2e-07 29.1 0.0 5.6e-07 28.7 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Yip1 PF04893.17 ORF109247 - 1.5e-12 47.5 9.1 2.4e-12 46.9 9.1 1.4 1 0 0 1 1 1 1 Yip1 domain YIF1 PF03878.15 ORF109247 - 0.00024 20.7 2.4 0.0078 15.8 2.4 2.1 1 1 0 1 1 1 1 YIF1 Wzt_C PF14524.6 ORF109247 - 0.17 11.9 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Wzt C-terminal domain DUF2613 PF11021.8 ORF109247 - 0.36 11.0 0.1 0.36 11.0 0.1 2.9 4 0 0 4 4 4 0 Protein of unknown function (DUF2613) STI1 PF17830.1 ORF106437 - 1.7e-17 63.1 8.5 7.8e-09 35.3 0.1 3.5 2 1 1 3 3 3 3 STI1 domain DUF445 PF04286.12 ORF106437 - 0.00036 20.5 6.1 0.073 12.9 1.6 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF445) Ins_allergen_rp PF06757.13 ORF106437 - 0.027 14.4 0.0 0.11 12.5 0.0 2.0 1 1 0 1 1 1 0 Insect allergen related repeat, nitrile-specifier detoxification 1-cysPrx_C PF10417.9 ORF106437 - 0.05 13.5 1.2 0.18 11.7 0.2 2.5 2 0 0 2 2 2 0 C-terminal domain of 1-Cys peroxiredoxin CotJB PF12652.7 ORF106437 - 0.063 13.5 1.4 0.85 9.9 0.1 2.7 2 1 1 3 3 3 0 CotJB protein Gag_p24 PF00607.20 ORF106437 - 0.091 12.6 0.9 9.9 6.0 0.1 2.1 2 0 0 2 2 2 0 gag gene protein p24 (core nucleocapsid protein) AAA_35 PF14516.6 ORF106437 - 0.14 10.9 0.4 4.5 6.0 0.0 2.3 2 0 0 2 2 2 0 AAA-like domain Bunya_G1 PF03557.15 ORF106437 - 0.17 9.9 0.3 0.25 9.3 0.0 1.3 2 0 0 2 2 2 0 Bunyavirus glycoprotein G1 Stevor PF17410.2 ORF106437 - 0.56 9.7 3.8 0.8 9.2 0.5 2.1 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame HisK_sensor PF18698.1 ORF106437 - 0.57 10.6 5.6 6.9 7.1 1.1 2.3 2 0 0 2 2 2 0 Histidine kinase sensor domain FluMu_N PF17891.1 ORF106437 - 1.4 8.7 3.3 5.4 6.9 0.3 2.8 3 0 0 3 3 3 0 Mu-like prophage FluMu N-terminal domain DUF4533 PF15047.6 ORF106437 - 6.4 6.3 6.2 4.3 6.8 3.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4533) Com_YlbF PF06133.11 ORF106437 - 8.7 7.0 15.3 66 4.2 8.8 3.4 2 2 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA Anoctamin PF04547.12 ORF103736 - 8.5e-31 107.3 0.2 1e-30 107.0 0.2 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel ATP_transf PF09830.9 ORF103280 - 0.15 12.2 0.0 2.8 8.2 0.0 2.3 2 0 0 2 2 2 0 ATP adenylyltransferase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks72.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks72.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks72.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks72.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosom_S12_S23 PF00164.25 NODE_29440_length_737_cov_226.542735_g23238_i0reverse_frame_1 - 1.9e-25 88.7 0.1 2.8e-25 88.2 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S12/S23 zf-C2H2 PF00096.26 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 1.6e-12 47.1 11.7 0.0013 19.1 2.5 3.5 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 7.7e-09 35.7 10.3 0.019 15.8 0.4 3.5 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 1.3e-07 31.7 16.4 0.00018 21.8 1.8 4.4 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2HC_2 PF13913.6 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 0.0045 16.9 5.1 3.7 7.5 0.1 3.3 3 0 0 3 3 3 2 zinc-finger of a C2HC-type zf-C2H2_6 PF13912.6 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 0.022 14.8 0.4 0.022 14.8 0.4 3.7 3 1 0 3 3 3 0 C2H2-type zinc finger CCAP PF11105.8 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 0.061 13.3 1.5 0.38 10.7 0.2 2.2 1 1 1 2 2 2 0 Arthropod cardioacceleratory peptide 2a zf-C2H2_8 PF15909.5 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 0.17 12.2 3.7 0.43 10.9 2.1 2.1 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-met PF12874.7 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 0.22 12.0 3.2 12 6.5 0.3 2.7 2 0 0 2 2 2 0 Zinc-finger of C2H2 type ADK_lid PF05191.14 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 0.24 11.4 3.3 0.48 10.4 1.8 2.1 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-LYAR PF08790.11 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 0.49 10.3 5.1 3.4 7.7 0.3 3.2 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger zf-C2H2_jaz PF12171.8 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 0.5 10.7 8.2 2.6 8.4 0.8 2.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 NODE_29425_length_737_cov_1039.280627_g23228_i0reverse_frame_1 - 4 7.3 8.2 0.21 11.4 0.4 2.6 3 0 0 3 3 3 0 zinc-finger C2H2-type PAS PF00989.25 NODE_29416_length_738_cov_2.557610_g23223_i0forward_frame_1 - 0.013 15.5 0.0 0.019 15.0 0.0 1.4 1 0 0 1 1 1 0 PAS fold DUF4116 PF13475.6 NODE_29411_length_738_cov_67.463727_g23218_i0reverse_frame_1 - 1.2e-17 63.4 0.0 4.7e-06 26.2 0.0 3.7 2 2 2 4 4 4 3 Domain of unknown function (DUF4116) Waikav_capsid_1 PF12264.8 NODE_29393_length_738_cov_220.354196_g23204_i0reverse_frame_1 - 0.029 13.9 4.3 7.1 6.1 0.1 3.1 2 1 1 3 3 3 0 Waikavirus capsid protein 1 B277 PF17623.2 NODE_29393_length_738_cov_220.354196_g23204_i0reverse_frame_1 - 3.3 6.7 5.9 0.72 8.9 0.7 2.1 2 0 0 2 2 2 0 Domain of unknown function PH_TFIIH PF08567.11 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_1 - 1.7e-11 44.3 0.8 1.1 9.7 0.0 5.1 1 1 4 5 5 5 5 TFIIH p62 subunit, N-terminal domain RCC1_2 PF13540.6 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_1 - 1.6e-09 37.3 10.4 0.044 13.6 0.1 5.6 6 0 0 6 6 6 4 Regulator of chromosome condensation (RCC1) repeat GST_C_2 PF13410.6 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_1 - 0.0096 15.9 1.1 36 4.5 0.0 4.4 4 1 0 4 4 4 0 Glutathione S-transferase, C-terminal domain NPV_P10 PF05531.12 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_1 - 0.059 13.8 0.3 71 4.0 0.0 4.2 5 0 0 5 5 5 0 Nucleopolyhedrovirus P10 protein bPH_2 PF03703.14 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_1 - 0.071 13.3 0.2 5 7.4 0.0 2.9 1 1 2 3 3 3 0 Bacterial PH domain Yuri_gagarin PF15934.5 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_1 - 0.14 12.0 0.1 12 5.6 0.0 2.4 2 1 0 2 2 2 0 Yuri gagarin K_channel_TID PF07941.11 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_1 - 5.4 7.5 19.7 10 6.7 1.1 4.5 1 1 4 5 5 5 0 Potassium channel Kv1.4 tandem inactivation domain DUF4695 PF15766.5 NODE_29363_length_739_cov_93.796875_g23180_i0forward_frame_3 - 0.053 13.8 0.6 10 6.4 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4695) PS-DH PF14765.6 NODE_29359_length_739_cov_125.427557_g23176_i0reverse_frame_3 - 0.067 12.4 0.2 0.092 12.0 0.2 1.1 1 0 0 1 1 1 0 Polyketide synthase dehydratase Preseq_ALAS PF09029.10 NODE_29359_length_739_cov_125.427557_g23176_i0reverse_frame_2 - 0.095 13.2 1.1 4.8 7.7 0.0 2.4 2 1 0 2 2 2 0 5-aminolevulinate synthase presequence PUB PF09409.10 NODE_29359_length_739_cov_125.427557_g23176_i0forward_frame_2 - 8.5e-05 22.4 0.0 0.00015 21.6 0.0 1.4 1 0 0 1 1 1 1 PUB domain FHA PF00498.26 NODE_29352_length_739_cov_192.549716_g23170_i0reverse_frame_3 - 0.00014 22.1 1.3 0.00014 22.1 0.2 1.6 2 0 0 2 2 2 1 FHA domain DUF1796 PF08795.10 NODE_29352_length_739_cov_192.549716_g23170_i0reverse_frame_3 - 0.061 13.3 2.2 3.3 7.6 0.9 2.2 2 0 0 2 2 2 0 Putative papain-like cysteine peptidase (DUF1796) PRKCSH-like PF12999.7 NODE_29352_length_739_cov_192.549716_g23170_i0reverse_frame_3 - 0.77 9.5 11.7 0.3 10.8 6.0 2.1 2 0 0 2 2 2 0 Glucosidase II beta subunit-like ECH_2 PF16113.5 NODE_29352_length_739_cov_192.549716_g23170_i0reverse_frame_3 - 8 5.9 9.0 13 5.1 9.0 1.3 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase Rdx PF10262.9 NODE_29325_length_739_cov_10159.455966_g21013_i4reverse_frame_3 - 6.6e-07 29.4 0.0 1.4e-06 28.4 0.0 1.5 1 0 0 1 1 1 1 Rdx family Imm57 PF15596.6 NODE_29318_length_740_cov_3.221277_g23143_i0forward_frame_3 - 0.00011 22.5 0.1 0.0002 21.7 0.1 1.5 1 0 0 1 1 1 1 Immunity protein 57 DUF2778 PF10908.8 NODE_29318_length_740_cov_3.221277_g23143_i0forward_frame_2 - 0.01 16.1 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2778) PATR PF12951.7 NODE_29317_length_740_cov_4.625532_g23142_i0forward_frame_2 - 6.6e-05 22.9 4.1 6.6e-05 22.9 4.1 6.3 5 3 1 6 6 6 2 Passenger-associated-transport-repeat Phage_spike PF18715.1 NODE_29317_length_740_cov_4.625532_g23142_i0forward_frame_2 - 0.028 14.5 3.3 0.028 14.5 3.3 4.0 3 1 0 3 3 3 0 Phage spike trimer PP2C_2 PF13672.6 NODE_29317_length_740_cov_4.625532_g23142_i0forward_frame_2 - 0.052 13.2 1.1 0.069 12.8 1.1 1.2 1 0 0 1 1 1 0 Protein phosphatase 2C DUF2163 PF09931.9 NODE_29317_length_740_cov_4.625532_g23142_i0forward_frame_2 - 0.38 11.0 2.8 4.2 7.6 0.4 2.5 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2163) RRM_1 PF00076.22 NODE_29311_length_740_cov_78.296454_g23138_i0reverse_frame_3 - 0.012 15.4 0.0 0.031 14.1 0.0 1.7 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF1295 PF06966.12 NODE_29301_length_740_cov_109.797163_g23128_i0reverse_frame_2 - 3.9e-36 124.7 0.1 4.7e-36 124.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 NODE_29301_length_740_cov_109.797163_g23128_i0reverse_frame_2 - 1.1e-06 28.7 0.7 1.7e-06 28.1 0.7 1.4 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 NODE_29301_length_740_cov_109.797163_g23128_i0reverse_frame_2 - 8.7e-06 26.1 0.4 8.7e-06 26.1 0.4 2.0 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 NODE_29301_length_740_cov_109.797163_g23128_i0reverse_frame_2 - 1.1e-05 25.8 1.0 1.1e-05 25.8 1.0 2.0 1 1 1 2 2 2 1 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 NODE_29301_length_740_cov_109.797163_g23128_i0reverse_frame_2 - 0.00068 18.5 0.7 0.0012 17.7 0.7 1.3 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family UPF0370 PF13980.6 NODE_29301_length_740_cov_109.797163_g23128_i0reverse_frame_2 - 0.9 9.6 3.3 3.7 7.6 0.0 2.9 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0370) Ig_2 PF13895.6 NODE_29301_length_740_cov_109.797163_g23128_i0forward_frame_2 - 0.1 12.9 0.2 0.18 12.2 0.2 1.3 1 0 0 1 1 1 0 Immunoglobulin domain HCV_NS2 PF01538.18 NODE_29283_length_740_cov_532.607092_g23114_i0reverse_frame_2 - 0.0057 16.3 0.2 0.0087 15.7 0.2 1.2 1 0 0 1 1 1 1 Hepatitis C virus non-structural protein NS2 Guanylate_kin PF00625.21 NODE_29279_length_740_cov_959.126241_g23112_i0forward_frame_3 - 5.9e-38 130.4 1.4 7.3e-38 130.1 1.4 1.1 1 0 0 1 1 1 1 Guanylate kinase Peptidase_M75 PF09375.10 NODE_29279_length_740_cov_959.126241_g23112_i0forward_frame_3 - 0.0039 16.7 0.0 0.0052 16.3 0.0 1.1 1 0 0 1 1 1 1 Imelysin EssA PF10661.9 NODE_29279_length_740_cov_959.126241_g23112_i0forward_frame_3 - 0.29 11.0 4.9 0.58 10.0 4.9 1.5 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA RsgA_GTPase PF03193.16 NODE_29279_length_740_cov_959.126241_g23112_i0forward_frame_2 - 0.013 15.4 0.1 0.02 14.8 0.1 1.2 1 0 0 1 1 1 0 RsgA GTPase Pkinase PF00069.25 NODE_29263_length_741_cov_2.711048_g23099_i0reverse_frame_3 - 1.7e-31 109.6 0.1 2.7e-31 108.9 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_29263_length_741_cov_2.711048_g23099_i0reverse_frame_3 - 7.1e-17 61.5 0.0 9.6e-17 61.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_29263_length_741_cov_2.711048_g23099_i0reverse_frame_3 - 6e-05 22.0 0.1 8.5e-05 21.5 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_29263_length_741_cov_2.711048_g23099_i0reverse_frame_3 - 0.00043 19.7 0.0 0.001 18.5 0.0 1.6 2 0 0 2 2 2 1 Kinase-like Asparaginase_2 PF01112.18 NODE_29261_length_741_cov_3.228045_g23097_i0reverse_frame_3 - 2.2e-102 342.2 0.5 2.4e-102 342.1 0.5 1.0 1 0 0 1 1 1 1 Asparaginase CAP_N PF01213.19 NODE_29252_length_741_cov_95.022663_g23088_i0reverse_frame_2 - 0.74 9.2 3.3 1.3 8.4 3.3 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal REV PF00424.18 NODE_29252_length_741_cov_95.022663_g23088_i0forward_frame_3 - 0.004 17.2 2.1 0.0088 16.0 2.1 1.5 1 0 0 1 1 1 1 REV protein (anti-repression trans-activator protein) GST_C_3 PF14497.6 NODE_29228_length_741_cov_618.580737_g23067_i0forward_frame_3 - 5.6e-16 58.5 0.3 1.1e-15 57.6 0.3 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 NODE_29228_length_741_cov_618.580737_g23067_i0forward_frame_3 - 3.5e-10 40.0 0.1 7.6e-10 38.9 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 NODE_29228_length_741_cov_618.580737_g23067_i0forward_frame_3 - 1e-09 38.6 0.2 1e-09 38.6 0.2 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 NODE_29228_length_741_cov_618.580737_g23067_i0forward_frame_3 - 1.5e-07 31.3 0.0 4.8e-07 29.7 0.0 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 NODE_29228_length_741_cov_618.580737_g23067_i0forward_frame_3 - 2.4e-05 24.6 0.1 0.00021 21.6 0.1 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain DRIM PF07539.12 NODE_29228_length_741_cov_618.580737_g23067_i0forward_frame_3 - 0.022 13.1 0.0 0.026 12.9 0.0 1.1 1 0 0 1 1 1 0 Down-regulated in metastasis GST_C_6 PF17171.4 NODE_29228_length_741_cov_618.580737_g23067_i0forward_frame_3 - 0.068 13.0 0.1 0.17 11.7 0.1 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DUF4872 PF16169.5 NODE_29228_length_741_cov_618.580737_g23067_i0forward_frame_2 - 0.019 14.7 0.1 0.068 12.9 0.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4872) Thg1C PF14413.6 ORF99612 - 1.8e-32 112.0 20.1 1.5e-30 105.9 20.1 2.9 1 1 0 1 1 1 1 Thg1 C terminal domain Thg1 PF04446.12 ORF99612 - 6.2e-11 42.4 1.1 9.1e-11 41.9 0.2 1.7 2 0 0 2 2 2 1 tRNAHis guanylyltransferase Inositol_P PF00459.25 ORF98776 - 3.8e-49 167.6 0.0 4.7e-49 167.3 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FAD_binding_8 PF08022.12 ORF98449 - 1.3e-17 63.8 0.1 2.6e-17 62.9 0.1 1.4 1 0 0 1 1 1 1 FAD-binding domain NAD_binding_6 PF08030.12 ORF98449 - 0.015 15.4 0.0 0.057 13.5 0.0 1.9 2 1 0 2 2 2 0 Ferric reductase NAD binding domain FAD_binding_6 PF00970.24 ORF98449 - 0.042 14.2 0.0 0.14 12.6 0.0 1.8 2 0 0 2 2 2 0 Oxidoreductase FAD-binding domain Ferric_reduct PF01794.19 ORF98449 - 0.12 12.5 3.7 0.2 11.8 0.6 2.8 4 0 0 4 4 4 0 Ferric reductase like transmembrane component FAD_binding_8 PF08022.12 ORF97115 - 1.3e-17 63.8 0.1 2.6e-17 62.9 0.1 1.4 1 0 0 1 1 1 1 FAD-binding domain NAD_binding_6 PF08030.12 ORF97115 - 0.015 15.4 0.0 0.057 13.5 0.0 1.9 2 1 0 2 2 2 0 Ferric reductase NAD binding domain FAD_binding_6 PF00970.24 ORF97115 - 0.042 14.2 0.0 0.14 12.6 0.0 1.8 2 0 0 2 2 2 0 Oxidoreductase FAD-binding domain Ferric_reduct PF01794.19 ORF97115 - 0.12 12.5 3.7 0.2 11.8 0.6 2.8 4 0 0 4 4 4 0 Ferric reductase like transmembrane component E1-E2_ATPase PF00122.20 ORF96181 - 9.2e-35 119.8 0.2 2.3e-34 118.5 0.0 1.7 1 1 0 2 2 2 1 E1-E2 ATPase DUF4119 PF13494.6 ORF96181 - 0.04 14.1 0.1 0.087 13.0 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF4119) NAT PF04768.13 ORF96181 - 0.052 13.2 0.0 0.095 12.3 0.0 1.4 1 0 0 1 1 1 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase GDA1_CD39 PF01150.17 ORF94910 - 2.1e-29 102.4 0.0 2.6e-29 102.2 0.0 1.0 1 0 0 1 1 1 1 GDA1/CD39 (nucleoside phosphatase) family Ion_trans PF00520.31 ORF94263 - 2.3e-38 131.8 7.6 3.1e-38 131.4 7.6 1.1 1 0 0 1 1 1 1 Ion transport protein bZIP_1 PF00170.21 ORF91177 - 2e-10 40.6 7.9 5.2e-10 39.3 7.9 1.6 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF91177 - 0.00024 21.1 7.2 0.00073 19.6 7.2 1.9 1 0 0 1 1 1 1 Basic region leucine zipper DNA_alkylation PF08713.11 ORF91177 - 0.00037 20.3 0.0 0.00082 19.2 0.0 1.5 1 0 0 1 1 1 1 DNA alkylation repair enzyme DUF16 PF01519.16 ORF91177 - 0.0058 17.1 2.4 0.011 16.2 2.4 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF16 LCD1 PF09798.9 ORF91177 - 0.0078 14.8 3.3 0.008 14.7 3.3 1.1 1 0 0 1 1 1 1 DNA damage checkpoint protein bZIP_Maf PF03131.17 ORF91177 - 0.0088 16.5 4.9 0.0088 16.5 4.9 1.9 3 0 0 3 3 1 1 bZIP Maf transcription factor Med4 PF10018.9 ORF91177 - 0.021 14.5 3.4 0.033 13.9 3.4 1.4 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 TRAF_BIRC3_bd PF16673.5 ORF91177 - 0.026 14.3 4.7 0.25 11.2 1.6 2.9 2 1 1 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain BORCS6 PF10157.9 ORF91177 - 0.033 14.4 0.0 0.055 13.7 0.0 1.3 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 Lipoprotein_20 PF13942.6 ORF91177 - 0.035 14.0 0.6 0.083 12.8 0.6 1.6 1 0 0 1 1 1 0 YfhG lipoprotein Phage_HK97_TLTM PF06120.11 ORF91177 - 0.036 13.2 3.6 0.064 12.4 3.6 1.4 1 0 0 1 1 1 0 Tail length tape measure protein DUF948 PF06103.11 ORF91177 - 0.043 14.1 0.4 0.12 12.6 0.2 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) ZapB PF06005.12 ORF91177 - 0.048 14.1 1.4 0.048 14.1 1.4 1.9 2 0 0 2 2 1 0 Cell division protein ZapB G-gamma PF00631.22 ORF91177 - 0.062 13.3 0.1 2.6 8.1 0.0 2.6 2 0 0 2 2 2 0 GGL domain BRI3BP PF14965.6 ORF91177 - 0.067 12.7 1.0 0.12 11.9 1.0 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 NBP1 PF08537.10 ORF91177 - 0.097 12.1 7.9 0.099 12.0 5.6 1.9 2 0 0 2 2 2 0 Fungal Nap binding protein NBP1 CALCOCO1 PF07888.11 ORF91177 - 0.12 11.2 5.8 0.16 10.8 5.8 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like FlaC_arch PF05377.11 ORF91177 - 0.13 12.6 2.3 0.24 11.8 0.3 2.4 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) ATF7IP_BD PF16788.5 ORF91177 - 0.16 12.1 6.2 0.26 11.3 6.2 1.3 1 0 0 1 1 1 0 ATF-interacting protein binding domain Sec16 PF12932.7 ORF91177 - 0.18 12.4 1.4 0.19 12.3 0.3 1.7 2 0 0 2 2 1 0 Vesicle coat trafficking protein Sec16 mid-region CLZ PF16526.5 ORF91177 - 0.22 11.9 7.2 0.1 13.0 3.1 2.5 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Prominin PF05478.11 ORF91177 - 0.26 9.2 4.4 0.31 8.9 3.8 1.3 1 1 0 1 1 1 0 Prominin A_deaminase PF00962.22 ORF90622 - 7.2e-15 55.1 0.0 9e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase FAM219A PF15260.6 ORF90622 - 0.053 13.9 0.4 5.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Protein family FAM219A CAF1 PF04857.20 ORF90273 - 2.6e-29 102.4 0.1 3.4e-24 85.6 0.0 2.2 1 1 1 2 2 2 2 CAF1 family ribonuclease FAD_binding_3 PF01494.19 ORF88684 - 3.2e-09 36.5 0.0 4.2e-09 36.1 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF88684 - 1.1e-06 28.2 0.0 1.4e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF88684 - 0.00095 18.3 1.7 0.026 13.6 0.6 2.1 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 ORF88684 - 0.0079 16.4 0.3 0.016 15.4 0.3 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF88684 - 0.01 15.1 0.1 0.028 13.7 0.1 1.6 2 0 0 2 2 2 0 Thi4 family HI0933_like PF03486.14 ORF88684 - 0.019 13.7 1.1 0.03 13.0 0.5 1.6 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox PF00070.27 ORF88684 - 0.023 15.2 0.1 2.7 8.6 0.1 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF88684 - 0.034 13.4 0.0 0.39 9.9 0.1 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF88684 - 0.22 10.6 0.1 0.25 10.4 0.1 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A ACOX PF01756.19 ORF86486 - 2.8e-12 46.6 0.2 3.4e-12 46.3 0.2 1.1 1 0 0 1 1 1 1 Acyl-CoA oxidase Suf PF05843.14 ORF86486 - 0.023 14.7 0.8 0.26 11.3 0.1 2.1 2 0 0 2 2 2 0 Suppressor of forked protein (Suf) GBP PF02263.19 ORF86458 - 6.5e-57 192.8 0.0 7.3e-57 192.6 0.0 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain MMR_HSR1 PF01926.23 ORF86458 - 0.015 15.4 0.0 0.023 14.8 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase Miff PF05644.11 ORF8624 - 0.0095 15.6 1.1 0.0095 15.6 1.1 1.7 2 0 0 2 2 2 1 Mitochondrial and peroxisomal fission factor Mff PspB PF06667.12 ORF8624 - 0.012 15.6 1.1 0.012 15.6 1.1 2.2 2 0 0 2 2 2 0 Phage shock protein B BLOC1_2 PF10046.9 ORF8624 - 0.028 14.7 0.8 0.057 13.7 0.4 1.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TSC22 PF01166.18 ORF8624 - 0.055 13.8 11.4 0.27 11.6 0.6 3.3 2 1 1 3 3 3 0 TSC-22/dip/bun family KASH_CCD PF14662.6 ORF8624 - 0.094 12.5 5.6 3 7.6 1.7 2.1 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Shugoshin_N PF07558.11 ORF8624 - 0.2 11.5 3.4 3 7.8 0.4 3.1 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region TMF_DNA_bd PF12329.8 ORF8624 - 0.34 10.9 7.4 2.6 8.1 1.8 2.5 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding YabA PF06156.13 ORF8624 - 0.87 10.3 5.2 0.67 10.6 0.1 2.3 2 1 0 2 2 2 0 Initiation control protein YabA Rootletin PF15035.6 ORF8624 - 1 9.4 9.1 0.13 12.2 1.2 2.1 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion DivIC PF04977.15 ORF8624 - 1.2 9.0 4.8 5.7 6.8 0.1 2.5 2 1 0 2 2 2 0 Septum formation initiator ZapB PF06005.12 ORF8624 - 1.5 9.3 8.0 6.5 7.3 2.1 2.3 2 0 0 2 2 2 0 Cell division protein ZapB Defensin_beta PF00711.19 ORF85481 - 1.4 9.0 3.9 11 6.2 0.2 3.0 3 0 0 3 3 3 0 Beta defensin Ribosomal_L3 PF00297.22 ORF85334 - 2e-13 50.1 7.9 3e-12 46.2 6.3 2.1 1 1 1 2 2 2 2 Ribosomal protein L3 RNase_T PF00929.24 ORF83104 - 2.1e-42 145.5 0.4 4.4e-42 144.4 0.1 1.6 2 0 0 2 2 2 1 Exonuclease DUF5051 PF16473.5 ORF83104 - 1.7e-06 28.2 0.2 7.7e-06 26.0 0.0 2.1 2 1 0 2 2 2 1 3' exoribonuclease, RNase T-like DNA_pol_A_exo1 PF01612.20 ORF83104 - 0.0034 17.1 0.1 0.08 12.7 0.0 2.5 2 1 0 2 2 2 1 3'-5' exonuclease vATP-synt_AC39 PF01992.16 ORF83104 - 0.1 12.1 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 ATP synthase (C/AC39) subunit ACOX PF01756.19 ORF83086 - 2.8e-12 46.6 0.2 3.4e-12 46.3 0.2 1.1 1 0 0 1 1 1 1 Acyl-CoA oxidase Suf PF05843.14 ORF83086 - 0.023 14.7 0.8 0.26 11.3 0.1 2.1 2 0 0 2 2 2 0 Suppressor of forked protein (Suf) Cytochrom_C552 PF02335.15 ORF76559 - 2.3e-95 320.1 11.3 2.8e-95 319.8 11.3 1.0 1 0 0 1 1 1 1 Cytochrome c552 Cytochrome_C7 PF14522.6 ORF76559 - 0.0014 18.6 17.2 0.0083 16.1 4.8 2.1 1 1 1 2 2 2 2 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 ORF76559 - 0.0016 18.9 3.4 0.0033 17.9 3.4 1.6 1 0 0 1 1 1 1 Cytochrome c3 Paired_CXXCH_1 PF09699.10 ORF76559 - 0.0065 16.2 2.2 0.024 14.4 2.3 1.9 1 1 0 1 1 1 1 Doubled CXXCH motif (Paired_CXXCH_1) zf-trcl PF13451.6 ORF76559 - 0.0069 16.3 0.5 0.014 15.3 0.5 1.5 1 0 0 1 1 1 1 Probable zinc-ribbon domain Cytochrome_CBB3 PF13442.6 ORF76559 - 0.0072 16.6 2.8 0.12 12.7 0.3 2.6 1 1 1 2 2 2 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_NNT PF03264.14 ORF76559 - 0.014 15.1 11.3 0.08 12.6 0.5 2.8 2 1 1 3 3 3 0 NapC/NirT cytochrome c family, N-terminal region PSCyt1 PF07635.11 ORF76559 - 0.024 15.2 0.4 3.8 8.2 0.1 2.8 2 0 0 2 2 2 0 Planctomycete cytochrome C Dehyd-heme_bind PF09098.10 ORF76559 - 0.054 13.1 0.9 0.13 11.8 0.2 1.9 1 1 0 1 1 1 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding CCP_MauG PF03150.14 ORF76559 - 0.082 13.5 5.0 5.8 7.6 5.0 2.4 1 1 0 1 1 1 0 Di-haem cytochrome c peroxidase Cytochrom_CIII PF02085.16 ORF76559 - 0.12 12.8 7.0 1.5 9.2 4.4 2.4 1 1 2 3 3 3 0 Class III cytochrome C family DUF1924 PF09086.11 ORF76559 - 0.32 11.4 4.1 2.9 8.3 0.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF1924) Cytochrome_C554 PF13435.6 ORF76559 - 1.1 10.3 8.8 1.2 10.1 3.7 2.8 2 1 2 4 4 4 0 Cytochrome c554 and c-prime NIF PF03031.18 ORF74518 - 2.3e-25 89.2 0.3 4.6e-25 88.2 0.3 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase YkuD PF03734.14 ORF73097 - 1.3e-06 28.9 0.3 2.7e-06 27.9 0.2 1.6 1 1 1 2 2 2 1 L,D-transpeptidase catalytic domain MipA PF06629.12 ORF68391 - 1.7e-49 169.0 5.6 1.9e-49 168.8 5.6 1.0 1 0 0 1 1 1 1 MltA-interacting protein MipA Cu_bind_CorA PF18252.1 ORF68391 - 0.089 12.4 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Copper(I)-binding protein CorA Thg1C PF14413.6 ORF67811 - 9.6e-34 116.2 19.6 1.6e-31 109.0 19.6 3.0 1 1 0 1 1 1 1 Thg1 C terminal domain Thg1 PF04446.12 ORF67811 - 6.2e-11 42.4 1.1 9.1e-11 41.9 0.2 1.7 2 0 0 2 2 2 1 tRNAHis guanylyltransferase HCO3_cotransp PF00955.21 ORF65468 - 3.4e-50 171.3 0.0 4.5e-50 170.9 0.0 1.0 1 0 0 1 1 1 1 HCO3- transporter family Glyco_tran_WecB PF03808.13 ORF6544 - 6.7e-53 179.1 0.2 9e-53 178.7 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferase WecB/TagA/CpsF family oligo_HPY PF08352.12 ORF62867 - 6.9e-18 64.9 0.1 1.2e-17 64.2 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region ABC_tran PF00005.27 ORF62867 - 1e-12 48.8 0.0 1.6e-12 48.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF62867 - 9e-06 25.7 0.1 1.2e-05 25.3 0.1 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Propep_M14 PF02244.16 ORF62867 - 0.095 13.1 0.1 0.23 11.9 0.1 1.6 1 0 0 1 1 1 0 Carboxypeptidase activation peptide SMC_N PF02463.19 ORF62867 - 0.13 11.6 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF62867 - 0.14 12.4 0.0 0.51 10.6 0.0 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PAD_porph PF04371.15 ORF62534 - 1.7e-63 214.9 0.0 1.9e-63 214.7 0.0 1.0 1 0 0 1 1 1 1 Porphyromonas-type peptidyl-arginine deiminase Cellulase PF00150.18 ORF6187 - 7.9e-06 25.5 0.3 1e-05 25.1 0.3 1.1 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) bZIP_1 PF00170.21 ORF61572 - 2e-10 40.6 7.9 5.2e-10 39.3 7.9 1.6 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF61572 - 0.00024 21.1 7.2 0.00073 19.6 7.2 1.9 1 0 0 1 1 1 1 Basic region leucine zipper DNA_alkylation PF08713.11 ORF61572 - 0.00037 20.3 0.0 0.00082 19.2 0.0 1.5 1 0 0 1 1 1 1 DNA alkylation repair enzyme DUF16 PF01519.16 ORF61572 - 0.0058 17.1 2.4 0.011 16.2 2.4 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF16 LCD1 PF09798.9 ORF61572 - 0.0078 14.8 3.3 0.008 14.7 3.3 1.1 1 0 0 1 1 1 1 DNA damage checkpoint protein bZIP_Maf PF03131.17 ORF61572 - 0.0088 16.5 4.9 0.0088 16.5 4.9 1.9 3 0 0 3 3 1 1 bZIP Maf transcription factor Med4 PF10018.9 ORF61572 - 0.021 14.5 3.4 0.033 13.9 3.4 1.4 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 TRAF_BIRC3_bd PF16673.5 ORF61572 - 0.026 14.3 4.7 0.25 11.2 1.6 2.9 2 1 1 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain BORCS6 PF10157.9 ORF61572 - 0.033 14.4 0.0 0.055 13.7 0.0 1.3 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 Lipoprotein_20 PF13942.6 ORF61572 - 0.035 14.0 0.6 0.083 12.8 0.6 1.6 1 0 0 1 1 1 0 YfhG lipoprotein Phage_HK97_TLTM PF06120.11 ORF61572 - 0.036 13.2 3.6 0.064 12.4 3.6 1.4 1 0 0 1 1 1 0 Tail length tape measure protein DUF948 PF06103.11 ORF61572 - 0.043 14.1 0.4 0.12 12.6 0.2 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) ZapB PF06005.12 ORF61572 - 0.048 14.1 1.4 0.048 14.1 1.4 1.9 2 0 0 2 2 1 0 Cell division protein ZapB G-gamma PF00631.22 ORF61572 - 0.062 13.3 0.1 2.6 8.1 0.0 2.6 2 0 0 2 2 2 0 GGL domain BRI3BP PF14965.6 ORF61572 - 0.067 12.7 1.0 0.12 11.9 1.0 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 NBP1 PF08537.10 ORF61572 - 0.097 12.1 7.9 0.099 12.0 5.6 1.9 2 0 0 2 2 2 0 Fungal Nap binding protein NBP1 CALCOCO1 PF07888.11 ORF61572 - 0.12 11.2 5.8 0.16 10.8 5.8 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like FlaC_arch PF05377.11 ORF61572 - 0.13 12.6 2.3 0.24 11.8 0.3 2.4 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) ATF7IP_BD PF16788.5 ORF61572 - 0.16 12.1 6.2 0.26 11.3 6.2 1.3 1 0 0 1 1 1 0 ATF-interacting protein binding domain Sec16 PF12932.7 ORF61572 - 0.18 12.4 1.4 0.19 12.3 0.3 1.7 2 0 0 2 2 1 0 Vesicle coat trafficking protein Sec16 mid-region CLZ PF16526.5 ORF61572 - 0.22 11.9 7.2 0.1 13.0 3.1 2.5 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Prominin PF05478.11 ORF61572 - 0.26 9.2 4.4 0.31 8.9 3.8 1.3 1 1 0 1 1 1 0 Prominin ING PF12998.7 ORF61404 - 1.8e-05 25.2 1.0 1.8e-05 25.2 1.0 2.5 3 0 0 3 3 3 1 Inhibitor of growth proteins N-terminal histone-binding PHD PF00628.29 ORF61404 - 0.00038 20.3 11.2 0.00079 19.3 11.2 1.6 1 0 0 1 1 1 1 PHD-finger DUF489 PF04356.12 ORF61404 - 0.013 15.5 0.1 0.022 14.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) DUF2207 PF09972.9 ORF59728 - 0.089 11.5 1.4 0.12 11.1 1.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FeoB_associated PF12669.7 ORF59728 - 2 8.9 4.7 3.1 8.3 0.1 2.5 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein SIS_2 PF13580.6 ORF5376 - 1.4e-32 112.6 0.2 3e-32 111.5 0.2 1.6 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 ORF5376 - 1.5e-08 34.6 0.0 3.8e-08 33.2 0.0 1.7 1 0 0 1 1 1 1 SIS domain Antibiotic_NAT PF02522.14 ORF5376 - 0.1 12.4 0.0 0.26 11.0 0.0 1.7 2 1 0 2 2 2 0 Aminoglycoside 3-N-acetyltransferase RimK PF08443.11 ORF5313 - 9.7e-06 25.3 0.0 1.3e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain Baculo_VP1054 PF05789.11 ORF5313 - 0.16 11.1 0.0 0.25 10.5 0.0 1.3 1 0 0 1 1 1 0 Baculovirus VP1054 protein Sugar_tr PF00083.24 ORF45761 - 1.2e-20 73.8 0.2 1.6e-20 73.4 0.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF45761 - 2.8e-06 26.5 0.0 3.1e-06 26.3 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Suf PF05843.14 ORF45761 - 0.021 14.8 0.3 0.025 14.6 0.3 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) A_deaminase PF00962.22 ORF39358 - 7.2e-15 55.1 0.0 9e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase FAM219A PF15260.6 ORF39358 - 0.053 13.9 0.4 5.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Protein family FAM219A Sulfotransfer_4 PF17784.1 ORF37089 - 1.2e-09 38.3 1.7 1.8e-09 37.7 1.4 1.5 1 1 0 1 1 1 1 Sulfotransferase domain Sugar_tr PF00083.24 ORF36190 - 3.7e-41 141.4 3.3 4.4e-41 141.2 3.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2070 PF09843.9 ORF36190 - 2.3 6.4 9.9 2.7 6.2 9.9 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) RPAP3_C PF13877.6 ORF33782 - 1.1e-13 51.5 0.4 5.5e-13 49.3 0.1 2.1 2 0 0 2 2 2 1 Potential Monad-binding region of RPAP3 TPR_2 PF07719.17 ORF33782 - 0.15 12.2 0.9 1.4 9.2 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat Laminin_G_3 PF13385.6 ORF33017 - 1.4e-11 44.7 0.0 1.9e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily YkuD PF03734.14 ORF31001 - 1.3e-06 28.9 0.3 2.7e-06 27.9 0.2 1.6 1 1 1 2 2 2 1 L,D-transpeptidase catalytic domain zf-RING_2 PF13639.6 ORF28624 - 1.1e-07 32.1 3.9 1.1e-07 32.1 3.9 4.9 5 1 0 5 5 5 1 Ring finger domain zf-RING_11 PF17123.5 ORF28624 - 0.00012 21.7 5.0 0.00012 21.7 5.0 3.7 3 0 0 3 3 3 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF28624 - 0.0011 18.8 3.4 0.0011 18.8 3.4 4.8 3 3 1 4 4 4 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF28624 - 0.0061 16.4 0.8 0.0061 16.4 0.8 5.7 5 2 0 5 5 5 2 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF28624 - 0.0078 16.5 3.5 0.0078 16.5 3.5 3.4 3 2 1 4 4 4 1 RING-H2 zinc finger domain SGS PF05002.15 ORF2836 - 2.5e-28 98.0 2.8 2.5e-28 98.0 2.8 2.8 3 0 0 3 3 3 1 SGS domain CS PF04969.16 ORF2836 - 5.4e-08 33.7 1.5 1.3e-07 32.6 1.5 1.7 1 0 0 1 1 1 1 CS domain Poxvirus_B22R_N PF13169.6 ORF2836 - 0.042 14.3 0.8 1.7 9.2 0.1 2.6 2 0 0 2 2 2 0 Poxvirus B22R protein N-terminal 2OG-FeII_Oxy_2 PF13532.6 ORF25899 - 0.0025 18.0 0.0 0.0032 17.7 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Peptidase_U49 PF10463.9 ORF25899 - 0.15 11.8 0.1 0.22 11.3 0.1 1.3 1 0 0 1 1 1 0 Peptidase U49 Glycoamylase PF10091.9 ORF22444 - 0.042 13.4 1.6 0.064 12.8 1.6 1.2 1 0 0 1 1 1 0 Putative glucoamylase Nucleoside_tran PF01733.18 ORF20559 - 3.8e-22 79.1 14.9 4.5e-22 78.8 14.9 1.0 1 0 0 1 1 1 1 Nucleoside transporter YdfA_immunity PF12127.8 ORF14124 - 0.017 14.2 0.0 0.026 13.6 0.0 1.3 1 0 0 1 1 1 0 SigmaW regulon antibacterial HEM4 PF02602.15 ORF12750 - 9.8e-40 136.3 0.0 1.1e-39 136.2 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD GATase_4 PF13230.6 ORF12750 - 0.039 12.9 0.0 0.08 11.8 0.0 1.5 1 0 0 1 1 1 0 Glutamine amidotransferases class-II Synaptobrevin PF00957.21 ORF111773 - 1.3e-05 24.9 0.4 1.9e-05 24.4 0.4 1.2 1 0 0 1 1 1 1 Synaptobrevin cNMP_binding PF00027.29 ORF109817 - 0.00013 22.0 0.0 0.00019 21.4 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain YlbD_coat PF14071.6 ORF109817 - 0.25 11.6 7.9 0.22 11.8 5.2 1.9 2 0 0 2 2 2 0 Putative coat protein Pkinase PF00069.25 ORF108788 - 7.2e-24 84.6 0.2 1.6e-23 83.4 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF108788 - 2.6e-10 40.0 0.0 4.1e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase SAPS PF04499.15 ORF108641 - 0.0066 15.3 1.6 0.0087 14.9 1.6 1.1 1 0 0 1 1 1 1 SIT4 phosphatase-associated protein EGF PF00008.27 ORF108641 - 0.015 15.6 2.6 0.015 15.6 2.6 1.8 2 0 0 2 2 2 0 EGF-like domain EGF_2 PF07974.13 ORF108641 - 0.057 13.8 5.5 0.1 13.0 5.5 1.4 1 0 0 1 1 1 0 EGF-like domain Laminin_EGF PF00053.24 ORF108641 - 0.16 12.2 3.2 0.37 11.0 3.2 1.6 1 0 0 1 1 1 0 Laminin EGF domain ATP-synt_E PF05680.12 ORF108641 - 0.37 11.2 0.1 0.37 11.2 0.1 2.5 3 0 0 3 3 3 0 ATP synthase E chain DUF3292 PF11696.8 ORF108641 - 2.8 6.2 5.9 5.3 5.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3292) BPL_LplA_LipB PF03099.19 ORF107037 - 4.7e-07 29.8 0.0 7.3e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family DUF596 PF04591.12 ORF106737 - 0.086 13.0 1.3 0.66 10.2 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function, DUF596 CrgA PF06781.12 ORF106737 - 0.14 12.2 0.2 0.33 11.0 0.2 1.6 1 1 0 1 1 1 0 Cell division protein CrgA CCDC106 PF15794.5 ORF106737 - 0.23 11.1 0.6 0.31 10.7 0.0 1.4 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 106 MFS_1 PF07690.16 ORF10476 - 5.8e-11 41.9 9.9 6.5e-11 41.7 9.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF10476 - 0.0086 14.7 10.7 0.01 14.4 10.7 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein MccV PF17508.2 ORF104232 - 0.16 12.6 0.0 0.28 11.7 0.0 1.4 1 0 0 1 1 1 0 Microcin V bacteriocin Methylase_S PF01420.19 NODE_29557_length_735_cov_25.100000_g23334_i0reverse_frame_1 - 0.18 12.0 5.0 0.37 11.0 5.0 1.5 1 0 0 1 1 1 0 Type I restriction modification DNA specificity domain Dsh_C PF12316.8 NODE_29546_length_735_cov_143.941429_g23325_i0reverse_frame_1 - 0.48 10.8 24.0 0.034 14.5 6.4 2.1 2 0 0 2 2 2 0 Segment polarity protein dishevelled (Dsh) C terminal DUF2070 PF09843.9 NODE_29546_length_735_cov_143.941429_g23325_i0forward_frame_1 - 8.2 4.6 29.2 11 4.2 29.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) GST_C_3 PF14497.6 NODE_29474_length_736_cov_623.014265_g23067_i1reverse_frame_3 - 5.5e-16 58.6 0.3 1.1e-15 57.6 0.3 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 NODE_29474_length_736_cov_623.014265_g23067_i1reverse_frame_3 - 3.4e-10 40.0 0.1 7.6e-10 38.9 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 NODE_29474_length_736_cov_623.014265_g23067_i1reverse_frame_3 - 1e-09 38.6 0.2 1e-09 38.6 0.2 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 NODE_29474_length_736_cov_623.014265_g23067_i1reverse_frame_3 - 1.5e-07 31.3 0.0 4.7e-07 29.7 0.0 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 NODE_29474_length_736_cov_623.014265_g23067_i1reverse_frame_3 - 2.3e-05 24.7 0.1 0.00021 21.6 0.1 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain DRIM PF07539.12 NODE_29474_length_736_cov_623.014265_g23067_i1reverse_frame_3 - 0.021 13.2 0.0 0.024 13.0 0.0 1.1 1 0 0 1 1 1 0 Down-regulated in metastasis GST_C_6 PF17171.4 NODE_29474_length_736_cov_623.014265_g23067_i1reverse_frame_3 - 0.068 13.0 0.1 0.17 11.7 0.1 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DUF4872 PF16169.5 NODE_29474_length_736_cov_623.014265_g23067_i1reverse_frame_2 - 0.019 14.7 0.1 0.067 12.9 0.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4872) Transket_pyr PF02779.24 NODE_29463_length_737_cov_4.662393_g23259_i0forward_frame_2 - 1.2e-68 230.3 0.0 1.5e-68 230.0 0.0 1.1 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain OxoGdeHyase_C PF16870.5 NODE_29463_length_737_cov_4.662393_g23259_i0forward_frame_2 - 4.6e-07 29.7 0.0 7.5e-07 29.0 0.0 1.4 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal MORN PF02493.20 NODE_29460_length_737_cov_52.911681_g23256_i0reverse_frame_3 - 0.0026 17.6 0.9 0.0045 16.8 0.9 1.4 1 0 0 1 1 1 1 MORN repeat Ntox28 PF15605.6 NODE_29460_length_737_cov_52.911681_g23256_i0reverse_frame_2 - 0.037 14.3 2.3 0.049 13.9 0.1 2.2 1 1 1 2 2 2 0 Bacterial toxin 28 DUF3216 PF11505.8 NODE_29460_length_737_cov_52.911681_g23256_i0reverse_frame_2 - 0.47 10.7 3.0 0.52 10.6 0.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3216) PseudoU_synth_2 PF00849.22 NODE_29454_length_737_cov_121.243590_g23250_i0reverse_frame_3 - 2.5e-19 69.9 0.0 4.1e-19 69.2 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase Gemini_C4 PF01492.17 NODE_29454_length_737_cov_121.243590_g23250_i0forward_frame_2 - 0.039 13.9 1.1 0.059 13.3 0.3 1.7 2 0 0 2 2 2 0 Geminivirus C4 protein GPS PF01825.21 NODE_29440_length_737_cov_226.542735_g23238_i0reverse_frame_3 - 0.078 13.5 0.4 7.7 7.1 0.1 2.7 2 1 0 2 2 2 0 GPCR proteolysis site, GPS, motif DUF2368 PF10166.9 NODE_29425_length_737_cov_1039.280627_g23228_i0forward_frame_2 - 0.32 10.6 0.9 1 8.9 0.6 1.8 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2368) Mating_C PF12737.7 NODE_29393_length_738_cov_220.354196_g23204_i0reverse_frame_2 - 0.0006 19.2 11.6 1 8.5 0.2 4.2 1 1 3 4 4 4 4 C-terminal domain of homeodomain 1 Penaeidin PF05927.11 NODE_29393_length_738_cov_220.354196_g23204_i0reverse_frame_2 - 0.61 10.9 37.0 2.6 8.9 0.4 5.6 5 1 1 6 6 6 0 Penaeidin DUF2688 PF10892.8 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_3 - 4.6 6.8 7.0 18 4.9 0.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) Tax PF02959.16 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_2 - 0.0065 16.0 5.7 12 5.3 0.1 4.3 3 1 2 5 5 5 3 HTLV Tax 4HPAD_g_N PF18671.1 NODE_29393_length_738_cov_220.354196_g23204_i0forward_frame_2 - 0.11 12.2 0.6 32 4.3 0.0 3.1 3 0 0 3 3 3 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal DUF4768 PF15989.5 NODE_29390_length_738_cov_235.788051_g23201_i0reverse_frame_2 - 0.76 9.8 5.0 0.28 11.1 1.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4768) Yos1 PF08571.10 NODE_29386_length_738_cov_285.776671_g23197_i0forward_frame_3 - 0.063 13.6 0.5 0.14 12.5 0.5 1.5 1 0 0 1 1 1 0 Yos1-like Acetyltransf_1 PF00583.25 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 3.2e-13 49.9 0.0 6e-13 49.1 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 4.3e-10 39.6 0.2 9.6e-10 38.5 0.2 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 4.6e-09 36.6 0.5 1.1e-08 35.4 0.2 1.7 1 1 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 1.9e-06 27.7 0.0 4.3e-06 26.6 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 0.00021 21.5 0.2 0.00035 20.7 0.2 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 0.0025 17.3 5.4 0.0034 16.9 5.4 1.3 1 0 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_3 PF13302.7 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 0.0043 17.7 0.0 0.011 16.4 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 0.0047 17.0 0.0 0.0077 16.3 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 0.013 15.4 0.0 0.023 14.7 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_8 PF13523.6 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 0.021 14.5 0.0 0.038 13.7 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_18 PF18014.1 NODE_29378_length_738_cov_1069.014225_g23193_i0forward_frame_3 - 0.065 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF3287 PF11690.8 ORF99934 - 0.089 12.5 0.2 0.21 11.3 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) MORN_2 PF07661.13 ORF99934 - 0.25 11.7 0.4 0.78 10.2 0.2 1.9 1 1 0 1 1 1 0 MORN repeat variant CLP_protease PF00574.23 ORF99934 - 0.27 11.1 0.9 0.41 10.5 0.9 1.1 1 0 0 1 1 1 0 Clp protease DMPK_coil PF08826.10 ORF99934 - 5.9 7.1 9.7 69 3.7 6.1 3.0 2 1 0 2 2 2 0 DMPK coiled coil domain like Aldolase PF01081.19 ORF99804 - 1.6e-08 34.2 0.0 2.4e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 KDPG and KHG aldolase DHO_dh PF01180.21 ORF99804 - 0.0011 18.2 0.2 0.15 11.3 0.1 2.2 1 1 1 2 2 2 2 Dihydroorotate dehydrogenase NMO PF03060.15 ORF99804 - 0.035 13.5 0.6 1.2 8.5 0.6 2.1 1 1 0 1 1 1 0 Nitronate monooxygenase TMP-TENI PF02581.17 ORF99804 - 0.19 11.1 0.1 0.62 9.4 0.0 1.8 2 0 0 2 2 2 0 Thiamine monophosphate synthase SHIPPO-rpt PF07004.12 ORF9718 - 0.0036 18.2 5.7 1.5 9.9 0.2 4.5 5 0 0 5 5 5 2 Sperm-tail PG-rich repeat EGF_alliinase PF04863.13 ORF9718 - 0.13 12.7 0.3 0.28 11.6 0.3 1.5 1 0 0 1 1 1 0 Alliinase EGF-like domain Ion_trans PF00520.31 ORF96785 - 1.6e-18 66.9 13.7 2e-18 66.5 13.7 1.1 1 0 0 1 1 1 1 Ion transport protein Asp5 PF17000.5 ORF96785 - 0.24 11.5 0.0 0.24 11.5 0.0 2.9 3 1 0 3 3 3 0 Accessory secretory protein Sec, Asp5 COX2_TM PF02790.15 ORF96785 - 3.1 8.0 6.3 1.6 8.9 0.0 3.0 3 1 0 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane domain OAD_gamma PF04277.13 ORF96785 - 7.5 7.2 7.0 5.8 7.6 0.1 2.7 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain IBR PF01485.21 ORF94307 - 9.8e-05 22.5 8.3 9.8e-05 22.5 8.3 2.8 2 0 0 2 2 2 1 IBR domain, a half RING-finger domain DUF2574 PF10836.8 ORF94307 - 0.032 14.1 0.0 0.072 13.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) ARGLU PF15346.6 ORF94307 - 0.38 10.6 8.2 2.6 7.9 2.7 2.2 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 TerC PF03741.16 ORF90838 - 1.5e-13 50.8 2.7 4.7e-13 49.2 3.1 1.5 2 0 0 2 2 2 1 Integral membrane protein TerC family DUF3377 PF11857.8 ORF90838 - 0.65 10.0 2.8 2.2 8.2 0.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) Spore_GerAC PF05504.11 ORF90752 - 0.048 13.9 4.1 4.9 7.4 4.1 2.1 2 0 0 2 2 2 0 Spore germination B3/ GerAC like, C-terminal Spore_permease PF03845.13 ORF88575 - 0.00079 18.4 13.5 0.00079 18.4 13.5 1.6 2 0 0 2 2 2 1 Spore germination protein DSPc PF00782.20 ORF87546 - 8.4e-16 58.0 0.0 1e-15 57.7 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF87546 - 0.037 13.6 0.1 0.052 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 ORF87546 - 0.046 13.7 0.0 0.063 13.2 0.0 1.3 1 0 0 1 1 1 0 Tyrosine phosphatase family Chi-conotoxin PF16981.5 ORF84979 - 0.24 11.7 2.6 0.31 11.3 0.2 2.4 2 1 0 2 2 2 0 chi-Conotoxin or t superfamily Fib_alpha PF08702.10 ORF83219 - 0.0039 17.4 8.5 0.0039 17.4 8.5 1.7 2 0 0 2 2 2 1 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF83219 - 0.011 16.2 12.7 0.12 12.9 5.6 3.2 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF812 PF05667.11 ORF83219 - 0.28 10.0 23.4 0.37 9.6 23.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) AAA_13 PF13166.6 ORF83219 - 0.46 9.1 13.2 0.57 8.7 13.2 1.2 1 0 0 1 1 1 0 AAA domain Exonuc_VII_L PF02601.15 ORF83219 - 0.72 9.4 11.5 1.1 8.7 11.5 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3584 PF12128.8 ORF83219 - 1 6.8 26.4 1.4 6.4 26.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) CENP-K PF11802.8 ORF83219 - 1 8.9 11.3 0.063 12.8 3.3 2.2 1 1 1 2 2 2 0 Centromere-associated protein K CLZ PF16526.5 ORF83219 - 1.4 9.3 18.7 0.063 13.6 4.9 3.4 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels CSN7a_helixI PF18392.1 ORF83219 - 2.4 8.1 6.7 8.4 6.4 0.1 2.7 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain Spc7 PF08317.11 ORF83219 - 3.7 6.4 24.4 27 3.5 23.4 2.2 1 1 0 1 1 1 0 Spc7 kinetochore protein Peptidase_S46 PF10459.9 ORF83219 - 4.1 5.9 16.0 4.8 5.7 16.0 1.1 1 0 0 1 1 1 0 Peptidase S46 ING PF12998.7 ORF83219 - 4.6 7.9 9.5 1.9 9.2 5.8 2.1 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding CsgE PF10627.9 ORF83219 - 4.9 7.4 8.1 17 5.6 0.1 2.6 2 1 0 2 2 2 0 Curli assembly protein CsgE FUSC PF04632.12 ORF83219 - 6.6 5.1 22.1 0.47 8.9 11.0 1.9 1 1 1 2 2 2 0 Fusaric acid resistance protein family V_ATPase_I PF01496.19 ORF83219 - 7.3 4.4 10.3 11 3.8 10.3 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ZnuA PF01297.17 ORF83219 - 8.2 5.7 10.3 12 5.2 10.3 1.2 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic FAM76 PF16046.5 ORF83219 - 8.8 5.6 12.7 7.6 5.8 11.4 1.4 1 1 0 1 1 1 0 FAM76 protein NuA4 PF09340.10 ORF83219 - 9.5 6.2 7.3 3.3 7.6 0.6 2.6 1 1 1 2 2 2 0 Histone acetyltransferase subunit NuA4 Caps_synth_GfcC PF06251.11 ORF80190 - 4e-91 304.7 0.0 4.5e-91 304.5 0.0 1.0 1 0 0 1 1 1 1 Capsule biosynthesis GfcC PPR_2 PF13041.6 ORF798 - 1.5e-37 127.5 5.6 1.9e-17 63.2 0.2 6.2 3 1 3 6 6 6 5 PPR repeat family PPR_3 PF13812.6 ORF798 - 2.4e-33 114.0 0.0 2.8e-12 46.5 0.1 3.8 3 1 1 4 4 4 4 Pentatricopeptide repeat domain PPR PF01535.20 ORF798 - 7.4e-33 110.5 4.9 2.8e-07 30.3 0.0 7.1 7 0 0 7 7 7 6 PPR repeat PPR_long PF17177.4 ORF798 - 5.5e-18 65.1 0.0 1.4e-10 40.9 0.0 2.2 1 1 0 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF798 - 1e-17 63.5 3.7 6.7e-05 22.5 0.0 5.4 7 0 0 7 7 7 3 PPR repeat TPR_14 PF13428.6 ORF798 - 0.0035 18.0 1.1 17 6.6 0.0 4.4 4 2 1 5 5 5 1 Tetratricopeptide repeat BKACE PF05853.12 ORF798 - 0.0068 15.7 0.2 0.49 9.6 0.1 2.8 1 1 1 3 3 3 1 beta-keto acid cleavage enzyme Clathrin PF00637.20 ORF798 - 0.021 14.7 0.0 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 Region in Clathrin and VPS TPR_MalT PF17874.1 ORF798 - 0.027 13.8 0.2 0.75 9.1 0.1 2.0 2 0 0 2 2 2 0 MalT-like TPR region FGGY_C PF02782.16 ORF79343 - 1.2e-28 100.2 1.0 1.7e-28 99.7 1.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain XPC-binding PF09280.11 ORF79343 - 0.0048 16.6 0.2 0.012 15.3 0.2 1.6 1 0 0 1 1 1 1 XPC-binding domain UNC-50 PF05216.13 ORF75392 - 6.7e-76 254.7 22.8 8.3e-76 254.4 22.8 1.0 1 0 0 1 1 1 1 UNC-50 family DUF4713 PF15831.5 ORF75392 - 0.92 10.0 0.1 0.92 10.0 0.1 3.1 4 0 0 4 4 4 0 Domain of unknown function (DUF4713) Ank_2 PF12796.7 ORF73760 - 2.9e-31 107.9 6.6 5.4e-12 46.1 0.3 4.0 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF73760 - 2.2e-25 88.7 3.6 1.2e-06 28.9 0.1 5.3 2 1 5 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF73760 - 7.5e-24 81.2 2.7 0.0019 18.6 0.1 6.2 6 0 0 6 6 6 5 Ankyrin repeat Ank PF00023.30 ORF73760 - 4.7e-21 74.2 10.7 0.00063 20.1 0.5 6.0 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF73760 - 6.1e-21 74.2 9.2 4.1e-06 27.0 0.3 6.0 3 1 3 6 6 6 5 Ankyrin repeats (many copies) DUF1759 PF03564.15 ORF72491 - 0.063 13.2 0.5 0.063 13.2 0.5 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1759) DUF3810 PF12725.7 ORF72491 - 0.13 11.5 13.4 0.24 10.7 4.4 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF3810) DUF1664 PF07889.12 ORF72491 - 2.1 8.4 22.2 6.2 6.9 2.6 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) HEPN_MAE_28990 PF18737.1 ORF72491 - 2.5 8.0 15.5 0.047 13.6 6.1 2.3 1 1 1 2 2 2 0 MAE_28990/MAE_18760-like HEPN Spc7 PF08317.11 ORF72491 - 6.2 5.6 33.8 0.13 11.1 4.3 2.4 1 1 2 3 3 3 0 Spc7 kinetochore protein DUF4407 PF14362.6 ORF72491 - 7.8 5.8 16.3 15 4.9 15.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) ANAPC4_WD40 PF12894.7 ORF72203 - 1e-06 28.9 0.0 0.042 14.2 0.0 4.0 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF72203 - 0.033 15.1 0.0 89 4.2 0.0 3.7 3 0 0 3 3 3 0 WD domain, G-beta repeat VID27 PF08553.10 ORF72203 - 0.16 11.0 0.0 0.44 9.5 0.0 1.7 2 1 1 3 3 3 0 VID27 C-terminal WD40-like domain Lip_prot_lig_C PF10437.9 ORF72045 - 0.0038 17.2 0.0 0.0081 16.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus WD40 PF00400.32 ORF69604 - 1.9e-12 47.5 18.0 4e-05 24.3 0.1 5.5 5 1 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF69604 - 0.0024 18.1 0.2 0.19 12.1 0.0 2.7 3 0 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain Thiolase_C PF02803.18 ORF67750 - 3.7e-54 181.6 1.4 6.4e-54 180.8 1.4 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain Thiolase_N PF00108.23 ORF67750 - 7.7e-47 159.8 1.7 1.1e-46 159.3 1.7 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain ACP_syn_III_C PF08541.10 ORF67750 - 0.042 14.0 0.3 0.13 12.5 0.3 1.8 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Ketoacyl-synt_C PF02801.22 ORF67750 - 0.045 13.8 2.2 2.9 7.9 0.6 3.4 2 1 0 2 2 2 0 Beta-ketoacyl synthase, C-terminal domain DUF4373 PF14297.6 ORF67211 - 0.042 14.6 0.2 0.07 13.9 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4373) Rep_fac_C PF08542.11 ORF67211 - 0.091 13.2 0.1 0.4 11.1 0.1 2.0 2 0 0 2 2 2 0 Replication factor C C-terminal domain CAP PF00188.26 ORF63848 - 0.031 15.1 0.0 0.073 13.9 0.0 1.5 1 0 0 1 1 1 0 Cysteine-rich secretory protein family Dicty_REP PF05086.12 ORF63848 - 4.2 5.2 8.2 5 5.0 8.2 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein DUF4485 PF14846.6 ORF62821 - 0.15 12.1 9.3 0.45 10.6 1.4 3.4 4 0 0 4 4 4 0 Domain of unknown function (DUF4485) LemA PF04011.12 ORF60207 - 0.074 12.9 0.5 0.11 12.3 0.5 1.3 1 0 0 1 1 1 0 LemA family FSH1 PF03959.13 ORF5846 - 5.9e-26 91.4 0.0 7.6e-26 91.1 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Acyl_transf_3 PF01757.22 ORF5769 - 0.00029 20.0 31.0 0.00037 19.7 31.0 1.1 1 0 0 1 1 1 1 Acyltransferase family TPR_2 PF07719.17 ORF53809 - 2.3e-06 27.3 11.8 0.04 14.0 0.8 4.6 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF53809 - 0.00047 19.8 1.1 0.96 9.4 0.2 3.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF53809 - 0.0007 19.8 3.8 0.0076 16.5 0.6 4.2 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF53809 - 0.0009 19.9 18.7 0.046 14.5 0.9 5.1 2 1 3 5 5 5 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF53809 - 0.0064 16.2 0.1 3.2 7.5 0.1 3.4 3 0 0 3 3 3 1 TPR repeat TPR_8 PF13181.6 ORF53809 - 0.0084 16.3 0.0 0.58 10.5 0.0 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF53809 - 0.017 15.7 15.6 0.025 15.2 0.3 4.6 4 1 1 5 5 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF53809 - 0.031 14.2 12.3 0.42 10.6 0.1 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF53809 - 0.086 13.3 0.0 1.7 9.2 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF53809 - 0.14 12.9 0.8 0.14 12.9 0.8 4.0 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF53809 - 0.33 11.5 0.1 0.33 11.5 0.1 3.7 2 1 2 4 4 4 0 Tetratricopeptide repeat MCU PF04678.13 ORF53809 - 0.49 10.5 2.5 0.44 10.6 0.4 1.9 1 1 1 2 2 2 0 Mitochondrial calcium uniporter TPR_7 PF13176.6 ORF53809 - 0.75 10.0 10.2 0.48 10.6 0.8 3.9 4 1 0 4 4 3 0 Tetratricopeptide repeat Spc7 PF08317.11 ORF53809 - 2 7.2 7.3 0.27 10.1 0.8 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein CAF1 PF04857.20 ORF52399 - 1.1e-05 24.8 1.0 6.4e-05 22.3 0.1 2.4 2 1 0 2 2 2 1 CAF1 family ribonuclease SUR7 PF06687.12 ORF52283 - 0.49 10.0 9.4 0.29 10.7 4.3 2.3 2 1 0 2 2 2 0 SUR7/PalI family DUF3043 PF11241.8 ORF52283 - 1.9 8.5 3.2 22 5.1 0.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3043) Ank_2 PF12796.7 ORF52045 - 4.5e-10 40.0 2.0 0.00053 20.5 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF52045 - 4e-06 27.3 7.3 0.16 12.6 0.1 4.2 3 1 0 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF52045 - 6.7e-06 26.3 5.0 0.002 18.4 0.2 4.3 2 2 4 6 6 6 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF52045 - 2.6e-05 24.2 2.5 0.04 14.5 0.0 4.9 6 0 0 6 6 6 1 Ankyrin repeat Ank PF00023.30 ORF52045 - 0.17 12.4 12.6 1.5 9.4 0.1 4.8 5 1 0 5 5 5 0 Ankyrin repeat SEP PF08059.13 ORF50605 - 5.6e-10 39.7 1.0 1.8e-09 38.0 0.1 2.3 2 1 1 3 3 3 1 SEP domain FGGY_C PF02782.16 ORF48647 - 1.2e-28 100.2 1.0 1.7e-28 99.7 1.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain XPC-binding PF09280.11 ORF48647 - 0.0048 16.6 0.2 0.012 15.3 0.2 1.6 1 0 0 1 1 1 1 XPC-binding domain ANAPC4_WD40 PF12894.7 ORF48260 - 1.4e-05 25.3 0.0 0.14 12.5 0.0 3.2 3 0 0 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain DUF334 PF03904.13 ORF45203 - 0.025 14.1 8.4 0.026 14.1 7.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF334) PFL-like PF02901.15 ORF45203 - 0.026 13.2 1.4 0.03 13.0 1.4 1.1 1 0 0 1 1 1 0 Pyruvate formate lyase-like Alpha-amylase_C PF02806.18 ORF43342 - 1.1e-07 32.3 0.0 2.4e-07 31.1 0.0 1.6 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Aminotran_1_2 PF00155.21 ORF41355 - 5.3e-50 170.6 0.0 5.9e-50 170.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF41355 - 0.0069 15.4 0.0 0.011 14.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Alliinase_C PF04864.13 ORF41355 - 0.027 13.4 0.0 0.04 12.8 0.0 1.2 1 0 0 1 1 1 0 Allinase Methyltransf_23 PF13489.6 ORF39526 - 0.0063 16.4 0.0 0.0081 16.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF39526 - 0.022 15.4 0.0 0.047 14.3 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain SET_assoc PF11767.8 ORF39526 - 0.034 13.8 0.0 0.074 12.7 0.0 1.5 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated N2227 PF07942.12 ORF39526 - 0.22 10.7 0.0 0.37 9.9 0.0 1.3 1 0 0 1 1 1 0 N2227-like protein Cytochrom_C_asm PF01578.20 ORF39500 - 1.4e-32 113.2 24.9 1.4e-32 113.2 24.9 1.6 2 0 0 2 2 2 1 Cytochrome C assembly protein DUF3093 PF11292.8 ORF37762 - 0.012 15.9 4.7 0.025 14.8 4.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3093) DUF3270 PF11674.8 ORF37762 - 0.27 11.4 3.3 0.59 10.3 3.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) HlyE PF06109.13 ORF37762 - 1.6 8.0 4.7 2.6 7.3 4.7 1.2 1 0 0 1 1 1 0 Haemolysin E (HlyE) ArAE_2_N PF10337.9 ORF37762 - 4.2 6.3 6.2 6.9 5.6 6.2 1.3 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal Lig_chan PF00060.26 ORF34430 - 3.1e-05 23.9 0.0 3.7e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Ligand-gated ion channel DUF3921 PF13060.6 ORF33648 - 0.04 14.0 0.2 0.075 13.1 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3921) Pox_polyA_pol PF03296.13 ORF32526 - 0.075 12.9 0.1 0.16 11.9 0.0 1.5 2 0 0 2 2 2 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain zf-TFIIB PF13453.6 ORF32322 - 0.29 10.5 6.0 0.38 10.1 0.9 2.7 2 0 0 2 2 2 0 Transcription factor zinc-finger Mu-like_Com PF10122.9 ORF32322 - 0.36 10.3 0.0 0.36 10.3 0.0 3.5 4 0 0 4 4 4 0 Mu-like prophage protein Com Act-Frag_cataly PF09192.10 ORF3071 - 3.9e-12 46.1 0.0 5.6e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 Actin-fragmin kinase, catalytic HisKA PF00512.25 ORF27959 - 7e-10 38.8 1.2 6.3e-09 35.8 0.5 2.6 2 1 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 ORF27959 - 0.0083 16.6 0.0 0.02 15.4 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Acyl_transf_3 PF01757.22 ORF22688 - 0.00029 20.0 31.0 0.00037 19.7 31.0 1.1 1 0 0 1 1 1 1 Acyltransferase family OxoGdeHyase_C PF16870.5 ORF22085 - 1.6e-49 167.5 0.0 2.2e-49 167.0 0.0 1.1 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal Transket_pyr PF02779.24 ORF22085 - 1.9e-20 73.3 0.0 3.2e-20 72.5 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain LemA PF04011.12 ORF19505 - 0.074 12.9 0.5 0.11 12.3 0.5 1.3 1 0 0 1 1 1 0 LemA family DLH PF01738.18 ORF18893 - 1.5e-25 90.0 0.0 1.9e-25 89.7 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 ORF18893 - 0.0014 18.6 0.1 0.11 12.4 0.0 2.2 2 0 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 ORF18893 - 0.0036 16.8 0.3 0.0057 16.1 0.3 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF1100 PF06500.11 ORF18893 - 0.014 14.2 0.0 0.023 13.5 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) SBP_bac_3 PF00497.20 ORF18512 - 9.2e-21 74.3 0.0 1e-20 74.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 TPR_2 PF07719.17 ORF1546 - 0.0018 18.3 1.2 0.098 12.8 0.2 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF1546 - 0.035 14.7 0.5 4.7 8.1 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF1546 - 0.054 13.3 0.3 0.28 11.1 0.1 2.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF1546 - 0.14 12.3 0.1 0.6 10.3 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat FBPase_glpX PF03320.13 ORF14936 - 1.1e-86 290.5 1.4 1.2e-86 290.4 1.4 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Proteasome PF00227.26 ORF12137 - 9.5e-44 149.2 0.1 1.3e-43 148.7 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF12137 - 1e-12 47.5 0.1 2e-12 46.5 0.1 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature PAP1 PF08601.10 ORF105083 - 2.9 7.5 12.7 0.056 13.2 3.6 2.0 1 1 1 2 2 2 0 Transcription factor PAP1 zn-ribbon_14 PF16503.5 NODE_29794_length_730_cov_2.840288_g23514_i0reverse_frame_1 - 0.15 11.6 0.5 0.31 10.6 0.5 1.6 1 0 0 1 1 1 0 Zinc-ribbon Atracotoxin PF05353.11 NODE_29794_length_730_cov_2.840288_g23514_i0forward_frame_1 - 0.073 13.1 8.8 0.24 11.5 8.8 1.9 1 0 0 1 1 1 0 Delta Atracotoxin Sigma54_activat PF00158.26 NODE_29792_length_730_cov_3.517986_g23512_i0forward_frame_1 - 3.4e-33 114.7 0.1 5.9e-33 113.9 0.1 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain Response_reg PF00072.24 NODE_29792_length_730_cov_3.517986_g23512_i0forward_frame_1 - 8.5e-31 106.4 0.1 1.3e-30 105.9 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Sigma54_activ_2 PF14532.6 NODE_29792_length_730_cov_3.517986_g23512_i0forward_frame_1 - 3.4e-11 43.4 0.1 8.2e-11 42.2 0.1 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain FleQ PF06490.11 NODE_29792_length_730_cov_3.517986_g23512_i0forward_frame_1 - 0.00064 20.1 0.2 0.002 18.5 0.1 1.8 2 0 0 2 2 2 1 Flagellar regulatory protein FleQ AAA_16 PF13191.6 NODE_29792_length_730_cov_3.517986_g23512_i0forward_frame_1 - 0.0042 17.5 0.0 0.009 16.4 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 NODE_29792_length_730_cov_3.517986_g23512_i0forward_frame_1 - 0.033 14.6 0.0 0.077 13.4 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TIP49 PF06068.13 NODE_29792_length_730_cov_3.517986_g23512_i0forward_frame_1 - 0.04 13.1 0.0 0.057 12.6 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain Torsin PF06309.11 NODE_29792_length_730_cov_3.517986_g23512_i0forward_frame_1 - 0.19 11.9 0.0 0.42 10.7 0.0 1.6 2 0 0 2 2 2 0 Torsin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks73.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks73.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks73.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks73.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5531 PF17671.1 NODE_29771_length_730_cov_97.717986_g23491_i0reverse_frame_1 - 0.19 11.6 0.0 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5531) TypeIII_RM_meth PF12564.8 NODE_29759_length_730_cov_290.136691_g15670_i1forward_frame_1 - 2.3 8.4 9.9 0.13 12.4 0.8 2.8 3 0 0 3 3 3 0 Type III restriction/modification enzyme methylation subunit Big_1 PF02369.16 NODE_29747_length_731_cov_2.048851_g23478_i0reverse_frame_1 - 1.9e-28 98.2 28.6 1.2e-13 50.8 9.7 3.8 4 0 0 4 4 4 3 Bacterial Ig-like domain (group 1) Invasin_D3 PF09134.10 NODE_29747_length_731_cov_2.048851_g23478_i0reverse_frame_1 - 2.7e-23 82.1 22.5 9.2e-10 38.7 12.0 3.2 2 1 1 3 3 3 3 Invasin, domain 3 CarboxypepD_reg PF13620.6 NODE_29747_length_731_cov_2.048851_g23478_i0reverse_frame_1 - 1.1e-08 35.2 16.4 0.0001 22.5 0.1 2.9 3 0 0 3 3 3 2 Carboxypeptidase regulatory-like domain Big_3_5 PF16640.5 NODE_29747_length_731_cov_2.048851_g23478_i0reverse_frame_1 - 2.2e-07 31.0 26.6 0.0002 21.5 16.4 3.2 2 1 0 3 3 3 2 Bacterial Ig-like domain (group 3) Filamin PF00630.19 NODE_29747_length_731_cov_2.048851_g23478_i0reverse_frame_1 - 4.5e-06 27.4 0.6 0.016 16.0 0.1 2.3 2 0 0 2 2 2 2 Filamin/ABP280 repeat Glyco_hydro2_C5 PF18565.1 NODE_29747_length_731_cov_2.048851_g23478_i0reverse_frame_1 - 9.1e-05 22.2 1.8 1 9.2 0.0 3.9 3 1 0 3 3 3 2 Glycoside hydrolase family 2 C-terminal domain 5 MG2 PF01835.19 NODE_29747_length_731_cov_2.048851_g23478_i0reverse_frame_1 - 0.0021 18.5 1.6 0.066 13.7 0.1 2.7 2 1 0 2 2 2 1 MG2 domain Big_3 PF07523.12 NODE_29747_length_731_cov_2.048851_g23478_i0reverse_frame_1 - 0.0098 16.2 6.2 3.5 8.0 0.0 3.3 2 1 0 2 2 2 2 Bacterial Ig-like domain (group 3) SelK_SelG PF10961.8 NODE_29732_length_731_cov_128.153736_g23463_i0reverse_frame_1 - 0.39 11.3 2.4 16 6.2 0.5 2.4 1 1 1 2 2 2 0 Selenoprotein SelK_SelG DUF148 PF02520.17 NODE_29704_length_732_cov_89.707317_g23443_i0forward_frame_1 - 0.59 10.3 36.2 2.5 8.2 0.8 4.8 2 2 3 5 5 5 0 Domain of unknown function DUF148 FAM184 PF15665.5 NODE_29704_length_732_cov_89.707317_g23443_i0forward_frame_1 - 7 6.4 50.1 0.58 9.9 28.9 2.3 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B AP2 PF00847.20 NODE_29627_length_733_cov_940.808023_g2503_i1forward_frame_2 - 0.00017 21.8 0.2 0.00033 20.8 0.2 1.5 1 0 0 1 1 1 1 AP2 domain NLRC4_HD2 PF17776.1 NODE_29627_length_733_cov_940.808023_g2503_i1forward_frame_2 - 0.043 14.4 3.5 0.09 13.3 3.5 1.5 1 1 0 1 1 1 0 NLRC4 helical domain HD2 Aminotran_1_2 PF00155.21 NODE_29622_length_734_cov_3.167382_g23380_i0forward_frame_2 - 6.3e-25 88.1 0.0 7.7e-25 87.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II PHM7_cyt PF14703.6 NODE_29618_length_734_cov_38.422031_g23377_i0forward_frame_2 - 3.7e-05 24.0 0.0 5.9e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter Pox_A14 PF05767.12 NODE_29618_length_734_cov_38.422031_g23377_i0forward_frame_2 - 0.3 11.3 1.5 0.3 11.3 0.0 1.8 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 Exonuc_VII_L PF02601.15 NODE_29613_length_734_cov_87.483548_g6234_i1reverse_frame_3 - 0.045 13.3 2.2 0.049 13.2 2.2 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF883 PF05957.13 NODE_29613_length_734_cov_87.483548_g6234_i1reverse_frame_3 - 1.6 9.4 6.2 3.8 8.2 6.2 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) ATP11 PF06644.11 NODE_29613_length_734_cov_87.483548_g6234_i1reverse_frame_3 - 2.2 8.0 16.9 4.4 7.0 16.9 1.5 1 0 0 1 1 1 0 ATP11 protein Rpr2 PF04032.16 NODE_29613_length_734_cov_87.483548_g6234_i1reverse_frame_3 - 4.1 7.7 9.9 0.21 11.9 1.9 2.5 2 1 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-RING_2 PF13639.6 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 8.1e-10 38.9 5.2 8.1e-10 38.9 5.2 2.4 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 3.8e-08 33.2 3.9 3.8e-08 33.2 3.9 2.4 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 5.2e-07 29.4 5.3 5.2e-07 29.4 5.3 2.7 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 2e-06 27.4 4.8 2e-06 27.4 4.8 2.8 2 1 1 3 3 2 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 2.7e-05 23.7 4.3 2.7e-05 23.7 4.3 2.2 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 7.7e-05 22.9 4.3 7.7e-05 22.9 4.3 2.2 2 0 0 2 2 1 1 RING-H2 zinc finger domain FANCL_C PF11793.8 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 0.00033 20.8 3.2 0.00033 20.8 3.2 2.0 2 0 0 2 2 2 1 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 0.00045 20.0 5.0 0.00045 20.0 5.0 2.6 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 0.0046 16.9 5.5 0.0046 16.9 5.5 2.5 2 1 0 2 2 2 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 0.0082 16.2 3.1 0.0082 16.2 3.1 2.1 2 1 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 0.011 15.9 5.0 0.011 15.9 5.0 2.1 2 0 0 2 2 2 0 RING-variant domain Zf_RING PF16744.5 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 0.04 14.0 2.3 0.04 14.0 2.3 2.0 2 0 0 2 2 1 0 KIAA1045 RING finger PHD PF00628.29 NODE_29591_length_734_cov_265.409156_g23355_i0reverse_frame_3 - 0.48 10.3 12.0 0.047 13.6 6.1 2.1 2 0 0 2 2 2 0 PHD-finger HCV_NS2 PF01538.18 NODE_29581_length_734_cov_461.193133_g23347_i0reverse_frame_2 - 0.055 13.1 0.2 0.081 12.6 0.2 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 Fez1 PF06818.15 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.0039 17.7 29.5 0.0039 17.7 29.5 2.3 1 1 1 2 2 2 1 Fez1 Baculo_PEP_C PF04513.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.0078 16.3 17.3 0.2 11.7 7.4 2.9 2 1 0 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus DivIC PF04977.15 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.016 15.0 7.1 0.016 15.0 7.1 5.3 2 1 2 5 5 5 0 Septum formation initiator Rx_N PF18052.1 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.019 15.2 21.5 0.019 15.2 10.5 3.2 1 1 2 3 3 3 0 Rx N-terminal domain Flagellin_C PF00700.21 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.1 13.0 0.1 0.1 13.0 0.1 3.8 3 1 1 4 4 4 0 Bacterial flagellin C-terminal helical region DUF3584 PF12128.8 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.16 9.5 36.0 0.28 8.6 10.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) TPR_MLP1_2 PF07926.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.17 12.0 44.1 0.92 9.6 2.5 3.6 1 1 3 4 4 4 0 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.19 10.6 46.8 0.058 12.3 22.3 2.7 1 1 2 3 3 3 0 Spc7 kinetochore protein ZapB PF06005.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.23 11.9 53.9 17 5.9 6.6 5.6 1 1 2 3 3 2 0 Cell division protein ZapB FUSC PF04632.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.25 9.8 2.6 0.33 9.5 2.6 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Tup_N PF08581.10 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.36 11.2 44.0 0.29 11.5 4.7 4.6 1 1 3 4 4 4 0 Tup N-terminal KASH_CCD PF14662.6 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.57 10.0 48.0 0.94 9.3 27.1 2.6 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF1664 PF07889.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1 9.4 24.5 2.6 8.1 4.2 3.9 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.3 9.5 54.1 0.67 10.5 18.5 3.3 1 1 2 3 3 3 0 Apg6 coiled-coil region CALCOCO1 PF07888.11 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.4 7.7 38.2 2.6 6.8 35.1 1.9 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Cep57_MT_bd PF06657.13 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.6 9.2 30.9 0.34 11.4 4.8 4.9 2 2 3 5 5 5 0 Centrosome microtubule-binding domain of Cep57 DUF724 PF05266.14 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.6 8.5 40.4 1.9 8.3 13.8 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF724) HMMR_N PF15905.5 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.7 8.0 50.1 0.041 13.3 25.9 2.1 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal AAA_13 PF13166.6 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.8 7.1 41.5 0.15 10.7 11.8 2.0 1 1 1 2 2 2 0 AAA domain ADIP PF11559.8 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 3.2 7.8 45.9 12 5.9 24.8 3.9 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding Golgin_A5 PF09787.9 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 3.2 7.1 45.2 0.23 10.9 25.9 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 Spc24 PF08286.11 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 4.5 7.6 44.9 0.96 9.7 6.7 5.0 1 1 3 4 4 4 0 Spc24 subunit of Ndc80 Syntaxin-6_N PF09177.11 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 4.9 7.8 27.1 6.9 7.3 4.5 3.5 1 1 2 3 3 3 0 Syntaxin 6, N-terminal SlyX PF04102.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 8.7 7.0 28.1 4.1 8.1 6.1 4.7 2 1 3 5 5 5 0 SlyX DUF5082 PF16888.5 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 9.5 6.5 42.0 1.4 9.2 18.5 3.7 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) Rhomboid_SP PF12595.8 NODE_29552_length_735_cov_91.930000_g23330_i0forward_frame_2 - 2.1 7.6 9.5 3.1 7.1 9.3 1.4 1 1 0 1 1 1 0 Rhomboid serine protease DUF1180 PF06679.12 NODE_29546_length_735_cov_143.941429_g23325_i0forward_frame_2 - 0.018 15.5 0.6 0.034 14.6 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Dus PF01207.17 NODE_29542_length_735_cov_156.332857_g23322_i0reverse_frame_2 - 4.2e-19 68.8 0.0 5.9e-19 68.3 0.0 1.3 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) RRM_1 PF00076.22 ORF98666 - 0.0086 15.9 0.0 0.92 9.4 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LepB_N PF18640.1 ORF98666 - 0.087 12.4 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 LepB N-terminal domain DUF4651 PF15513.6 ORF98666 - 0.11 12.4 0.0 0.27 11.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4651) ABC_tran PF00005.27 ORF98660 - 7.3e-30 104.3 0.0 1.2e-29 103.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF98660 - 2.8e-07 30.2 0.5 4.6e-05 22.9 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF98660 - 0.00079 19.5 0.2 0.0028 17.7 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF98660 - 0.0028 17.8 0.0 0.0079 16.3 0.0 1.8 2 0 0 2 2 2 1 Immunity protein 58 AAA_29 PF13555.6 ORF98660 - 0.0078 15.9 0.0 0.023 14.4 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF98660 - 0.018 15.3 0.3 0.057 13.7 0.3 1.9 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 ORF98660 - 0.019 15.4 0.2 0.28 11.6 0.2 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 ORF98660 - 0.019 14.9 0.4 0.4 10.6 0.0 2.3 2 0 0 2 2 2 0 NTPase DUF87 PF01935.17 ORF98660 - 0.02 15.0 0.0 0.052 13.6 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_5 PF07728.14 ORF98660 - 0.031 14.3 0.3 13 5.8 0.0 2.9 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.17 ORF98660 - 0.04 13.7 0.1 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF98660 - 0.04 12.9 0.0 0.07 12.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_23 PF13476.6 ORF98660 - 0.042 14.3 1.5 0.085 13.3 0.1 2.0 2 1 0 2 2 2 0 AAA domain CbiA PF01656.23 ORF98660 - 0.044 13.9 0.1 0.084 12.9 0.1 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF815 PF05673.13 ORF98660 - 0.044 12.9 0.0 0.064 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_18 PF13238.6 ORF98660 - 0.049 14.2 0.2 0.077 13.5 0.2 1.5 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF98660 - 0.053 13.9 0.5 1.3 9.4 0.0 2.3 2 0 0 2 2 2 0 RNA helicase AAA_25 PF13481.6 ORF98660 - 0.087 12.4 0.0 0.29 10.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF3581 PF12119.8 ORF98660 - 0.087 12.2 0.0 0.36 10.2 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3581) AAA_24 PF13479.6 ORF98660 - 0.087 12.5 0.2 0.15 11.8 0.2 1.4 1 1 0 1 1 1 0 AAA domain HATPase_c_4 PF13749.6 ORF98660 - 0.14 12.3 0.1 0.46 10.6 0.0 1.8 2 0 0 2 2 2 0 Putative ATP-dependent DNA helicase recG C-terminal AAA_30 PF13604.6 ORF98660 - 0.16 11.7 0.3 0.75 9.5 0.3 1.9 1 1 0 1 1 1 0 AAA domain MORN PF02493.20 ORF97335 - 4.8e-15 54.5 29.8 3.8e-06 26.5 0.3 6.9 8 0 0 8 8 8 3 MORN repeat DUF3833 PF12915.7 ORF97335 - 0.13 11.9 0.2 0.19 11.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3833) Glycos_transf_2 PF00535.26 ORF97106 - 1.5e-33 116.0 0.0 1.8e-33 115.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF97106 - 6.1e-12 45.9 0.0 7.3e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 ORF97106 - 4e-05 23.2 0.0 0.00024 20.6 0.0 1.9 1 1 1 2 2 2 2 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 ORF97106 - 4.1e-05 23.2 0.0 0.00012 21.7 0.0 1.7 1 1 0 2 2 2 1 Glycosyltransferase like family 2 ADK PF00406.22 ORF96276 - 5.2e-56 188.9 0.0 6.4e-56 188.7 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF96276 - 1e-22 81.0 0.1 2.7e-22 79.7 0.0 1.6 2 0 0 2 2 2 1 AAA domain ADK_lid PF05191.14 ORF96276 - 4.1e-17 61.9 0.0 9e-17 60.8 0.0 1.6 1 0 0 1 1 1 1 Adenylate kinase, active site lid AAA_18 PF13238.6 ORF96276 - 4.1e-06 27.4 0.0 9.2e-06 26.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF96276 - 5.7e-06 26.6 0.0 1.9e-05 24.9 0.0 1.8 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 ORF96276 - 0.004 16.6 0.0 0.0063 15.9 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Hydin_ADK PF17213.3 ORF96276 - 0.033 14.5 0.4 1.2 9.4 0.1 2.4 1 1 1 2 2 2 0 Hydin Adenylate kinase-like domain Thymidylate_kin PF02223.17 ORF96276 - 0.06 13.0 0.0 2.6 7.7 0.0 2.5 2 1 1 3 3 3 0 Thymidylate kinase Zeta_toxin PF06414.12 ORF96276 - 0.096 11.9 0.0 0.19 11.0 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin DUF3980 PF13140.6 ORF93567 - 0.022 15.2 1.1 0.099 13.1 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3980) FAM183 PF14886.6 ORF93301 - 6.1e-06 26.9 0.1 4.2e-05 24.2 0.1 2.2 2 0 0 2 2 2 1 FAM183A and FAM183B related Macoilin PF09726.9 ORF9177 - 6.4 5.2 13.7 7.5 5.0 13.7 1.1 1 0 0 1 1 1 0 Macoilin family RicinB_lectin_2 PF14200.6 ORF91226 - 0.0042 17.8 0.2 0.14 12.9 0.1 2.5 2 1 2 4 4 4 3 Ricin-type beta-trefoil lectin domain-like GAS2 PF02187.17 ORF91226 - 0.15 12.2 0.0 19 5.4 0.0 2.6 3 0 0 3 3 3 0 Growth-Arrest-Specific Protein 2 Domain adh_short_C2 PF13561.6 ORF9112 - 5.9e-68 228.9 7.4 6.7e-68 228.7 7.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF9112 - 1.1e-61 207.7 3.4 1.4e-61 207.4 3.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF9112 - 1.7e-19 70.4 1.0 2.6e-19 69.8 1.0 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 ORF9112 - 1.3e-05 25.2 1.1 1.6e-05 24.9 1.1 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 ORF9112 - 2.7e-05 23.8 0.2 4.1e-05 23.1 0.2 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family ADH_zinc_N PF00107.26 ORF9112 - 0.013 15.5 0.9 0.031 14.3 0.2 2.0 2 0 0 2 2 2 0 Zinc-binding dehydrogenase RmlD_sub_bind PF04321.17 ORF9112 - 0.041 13.0 0.2 0.085 11.9 0.1 1.5 2 0 0 2 2 2 0 RmlD substrate binding domain DFP PF04127.15 ORF9112 - 0.1 12.4 1.4 0.34 10.7 0.3 2.1 1 1 1 2 2 2 0 DNA / pantothenate metabolism flavoprotein DUF1772 PF08592.11 ORF90831 - 0.36 11.1 5.6 1.4 9.2 0.9 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF1772) MgtC PF02308.16 ORF90831 - 1.3 9.4 6.3 4.1 7.8 1.0 2.7 1 1 2 3 3 3 0 MgtC family Exostosin PF03016.15 ORF9005 - 0.003 16.8 0.0 0.0039 16.4 0.0 1.1 1 0 0 1 1 1 1 Exostosin family DUF1805 PF08827.11 ORF9005 - 0.12 12.7 0.1 1.6 9.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) UDPGT PF00201.18 ORF87170 - 3.1e-18 65.9 0.0 4.6e-18 65.3 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF87170 - 0.00024 21.1 0.0 0.0003 20.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain zf-RING_2 PF13639.6 ORF862 - 5.4e-10 39.4 8.0 8.3e-10 38.9 8.0 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF862 - 1.8e-06 27.7 5.6 2.9e-06 27.0 5.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF862 - 4.2e-06 27.0 4.0 8e-06 26.0 4.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF862 - 7.6e-06 25.6 2.1 1.4e-05 24.7 2.1 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF862 - 5e-05 23.0 9.4 9e-05 22.2 9.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) WWE PF02825.20 ORF862 - 0.00025 21.6 1.6 0.00045 20.8 0.5 2.1 2 1 0 2 2 1 1 WWE domain zf-RING_5 PF14634.6 ORF862 - 0.00027 20.9 6.2 0.00044 20.1 6.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_1 PF14446.6 ORF862 - 0.00072 19.4 5.5 0.0039 17.1 5.5 2.0 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 Zn_ribbon_17 PF17120.5 ORF862 - 0.0012 18.4 4.6 0.0012 18.4 4.6 1.6 2 0 0 2 2 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF862 - 0.0053 16.8 4.4 0.013 15.5 4.4 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF862 - 0.012 15.6 8.1 0.022 14.8 8.1 1.5 1 0 0 1 1 1 0 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF862 - 0.022 14.6 6.3 0.039 13.8 6.3 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF862 - 0.035 14.0 5.9 0.081 12.8 5.9 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF862 - 0.064 13.1 5.3 0.13 12.1 5.3 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3H2C3 PF17122.5 ORF862 - 0.11 12.6 3.3 0.26 11.4 3.3 1.7 1 0 0 1 1 1 0 Zinc-finger FANCL_C PF11793.8 ORF862 - 0.86 9.8 5.2 12 6.1 5.2 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain ABC_tran PF00005.27 ORF84773 - 4.7e-29 101.7 0.0 8.5e-29 100.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF84773 - 3.9e-07 29.7 1.7 3.2e-05 23.5 0.5 2.1 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain NTPase_1 PF03266.15 ORF84773 - 0.00058 19.8 0.7 0.4 10.6 0.0 2.4 2 0 0 2 2 2 2 NTPase MMR_HSR1 PF01926.23 ORF84773 - 0.00084 19.4 0.1 0.0028 17.7 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF84773 - 0.0082 15.9 0.0 0.023 14.4 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain FKBP_N_2 PF18023.1 ORF84773 - 0.011 15.8 0.3 0.022 14.8 0.3 1.5 1 0 0 1 1 1 0 BDBT FKBP like N-terminal AAA PF00004.29 ORF84773 - 0.012 16.1 0.3 0.15 12.5 0.3 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.17 ORF84773 - 0.023 14.8 0.0 0.053 13.6 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_18 PF13238.6 ORF84773 - 0.03 14.9 0.1 0.053 14.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF84773 - 0.037 14.5 0.4 0.089 13.3 0.1 1.7 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 ORF84773 - 0.038 13.8 0.2 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 ORF84773 - 0.04 13.6 0.0 0.063 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF84773 - 0.043 12.8 0.0 0.072 12.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 ORF84773 - 0.046 13.8 0.0 0.071 13.2 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RNA_helicase PF00910.22 ORF84773 - 0.066 13.6 1.2 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase Imm58 PF15581.6 ORF84773 - 0.11 12.6 0.1 0.26 11.4 0.1 1.7 1 1 0 1 1 1 0 Immunity protein 58 AAA_5 PF07728.14 ORF84773 - 0.12 12.4 0.3 21 5.1 0.1 2.7 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 ORF84773 - 0.13 11.5 0.2 0.57 9.4 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_25 PF13481.6 ORF84773 - 0.14 11.8 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF84773 - 0.24 11.7 0.9 1 9.6 0.9 2.1 1 1 0 1 1 1 0 AAA domain LamB_YcsF PF03746.16 ORF79689 - 1.6e-94 316.1 0.6 1.8e-94 315.9 0.6 1.0 1 0 0 1 1 1 1 LamB/YcsF family Pepdidase_M14_N PF18027.1 ORF75987 - 8.4e-12 45.4 0.0 1.3e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain Transp_cyt_pur PF02133.15 ORF75317 - 7.6e-43 146.9 21.7 8.5e-43 146.7 21.7 1.0 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin Rhodanese PF00581.20 ORF74464 - 3.8e-14 53.1 0.0 8.7e-14 51.9 0.0 1.6 1 0 0 1 1 1 1 Rhodanese-like domain ABC_tran PF00005.27 ORF74316 - 4e-29 101.9 0.0 6.5e-29 101.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF74316 - 3.4e-07 29.9 0.3 5.9e-05 22.6 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF74316 - 0.00081 19.5 0.3 0.0016 18.5 0.3 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF74316 - 0.0035 17.4 0.0 0.0085 16.2 0.0 1.6 1 0 0 1 1 1 1 Immunity protein 58 AAA_29 PF13555.6 ORF74316 - 0.0089 15.8 0.0 0.023 14.4 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain NTPase_1 PF03266.15 ORF74316 - 0.022 14.7 0.5 0.38 10.7 0.1 2.3 2 0 0 2 2 2 0 NTPase DUF87 PF01935.17 ORF74316 - 0.024 14.7 0.0 0.053 13.6 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA PF00004.29 ORF74316 - 0.027 14.9 0.1 0.32 11.4 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF74316 - 0.033 14.2 0.3 13 5.8 0.0 2.8 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF74316 - 0.036 14.6 0.1 0.063 13.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF74316 - 0.041 13.7 0.1 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF74316 - 0.041 12.8 0.0 0.07 12.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 ORF74316 - 0.045 13.8 0.1 0.093 12.8 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_23 PF13476.6 ORF74316 - 0.049 14.1 0.9 0.089 13.3 0.1 1.7 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF74316 - 0.054 13.9 0.5 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA_24 PF13479.6 ORF74316 - 0.088 12.5 0.4 0.15 11.8 0.3 1.4 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF74316 - 0.088 12.4 0.0 0.29 10.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 ORF74316 - 0.12 12.1 0.1 0.35 10.5 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF74316 - 0.16 12.2 1.0 0.93 9.8 1.0 2.1 1 1 0 1 1 1 0 AAA domain MFS_1 PF07690.16 ORF73 - 4.8e-06 25.7 20.7 4.8e-06 25.7 20.7 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 ORF73 - 1e-05 24.1 7.2 1e-05 24.1 7.2 2.0 1 1 1 2 2 2 2 Organic Anion Transporter Polypeptide (OATP) family Lipase_3 PF01764.25 ORF69354 - 0.00014 21.7 0.3 0.00036 20.4 0.3 1.8 1 1 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF69354 - 0.058 14.0 0.1 0.12 13.0 0.1 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF2842 PF11003.8 ORF68277 - 0.21 11.9 0.5 0.57 10.5 0.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2842) PDEase_I PF00233.19 ORF67291 - 1.2e-64 218.4 0.1 1.5e-64 218.0 0.1 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase HD PF01966.22 ORF67291 - 0.021 15.0 0.1 0.039 14.2 0.1 1.6 1 1 0 1 1 1 0 HD domain ABC_tran PF00005.27 ORF66334 - 1.8e-28 99.8 0.0 3.3e-28 98.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF66334 - 3.7e-08 33.1 0.2 1.2e-05 24.9 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain NTPase_1 PF03266.15 ORF66334 - 0.00067 19.6 0.7 0.4 10.6 0.0 2.4 2 0 0 2 2 2 2 NTPase MMR_HSR1 PF01926.23 ORF66334 - 0.00075 19.6 0.1 0.0028 17.7 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF66334 - 0.0093 15.7 0.0 0.026 14.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain FKBP_N_2 PF18023.1 ORF66334 - 0.011 15.9 0.3 0.022 14.8 0.3 1.5 1 0 0 1 1 1 0 BDBT FKBP like N-terminal AAA PF00004.29 ORF66334 - 0.011 16.1 0.2 0.13 12.7 0.2 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.17 ORF66334 - 0.017 15.2 0.0 0.039 14.0 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_24 PF13479.6 ORF66334 - 0.019 14.7 0.1 0.03 14.0 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF66334 - 0.019 15.5 0.5 0.048 14.2 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 ORF66334 - 0.02 15.4 0.0 0.035 14.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF66334 - 0.025 13.6 0.0 0.042 12.8 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 ORF66334 - 0.039 13.7 0.2 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein CbiA PF01656.23 ORF66334 - 0.042 13.9 0.0 0.073 13.1 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RNA_helicase PF00910.22 ORF66334 - 0.06 13.7 1.1 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA_5 PF07728.14 ORF66334 - 0.12 12.4 0.3 20 5.1 0.1 2.7 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) Imm58 PF15581.6 ORF66334 - 0.12 12.4 0.1 0.26 11.4 0.1 1.6 1 1 0 1 1 1 0 Immunity protein 58 Zeta_toxin PF06414.12 ORF66334 - 0.13 11.5 0.2 0.55 9.5 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_22 PF13401.6 ORF66334 - 0.18 12.1 0.9 0.83 9.9 0.9 2.1 1 1 0 1 1 1 0 AAA domain Trigger_C PF05698.14 ORF66314 - 1.4e-41 142.2 11.3 2.5e-41 141.4 11.3 1.4 1 0 0 1 1 1 1 Bacterial trigger factor protein (TF) C-terminus FKBP_C PF00254.28 ORF66314 - 9.4e-07 29.1 0.2 2.4e-06 27.8 0.2 1.7 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase SurA_N_3 PF13624.6 ORF66314 - 0.0029 17.4 1.7 0.0046 16.8 1.2 1.7 1 1 0 1 1 1 1 SurA N-terminal domain DUF4172 PF13776.6 ORF66314 - 0.018 15.4 2.0 0.42 11.0 0.1 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4172) DUF3811 PF11656.8 ORF66314 - 0.046 14.1 1.8 0.083 13.3 0.1 2.2 2 0 0 2 2 2 0 YjbD family (DUF3811) Arabinose_Isome PF02610.15 ORF66314 - 0.8 8.9 5.0 0.74 9.0 2.1 1.9 1 1 1 2 2 2 0 L-arabinose isomerase zf-RING_2 PF13639.6 ORF64256 - 5.4e-10 39.4 8.0 8.3e-10 38.9 8.0 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF64256 - 1.8e-06 27.7 5.6 2.9e-06 27.0 5.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF64256 - 4.2e-06 27.0 4.0 8e-06 26.0 4.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF64256 - 7.6e-06 25.6 2.1 1.4e-05 24.7 2.1 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF64256 - 5e-05 23.0 9.4 9e-05 22.2 9.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) WWE PF02825.20 ORF64256 - 0.00025 21.6 1.6 0.00045 20.8 0.5 2.1 2 1 0 2 2 1 1 WWE domain zf-RING_5 PF14634.6 ORF64256 - 0.00027 20.9 6.2 0.00044 20.1 6.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_1 PF14446.6 ORF64256 - 0.00072 19.4 5.5 0.0039 17.1 5.5 2.0 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 Zn_ribbon_17 PF17120.5 ORF64256 - 0.0012 18.4 4.6 0.0012 18.4 4.6 1.6 2 0 0 2 2 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF64256 - 0.0053 16.8 4.4 0.013 15.5 4.4 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF64256 - 0.012 15.6 8.1 0.022 14.8 8.1 1.5 1 0 0 1 1 1 0 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF64256 - 0.022 14.6 6.3 0.039 13.8 6.3 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF64256 - 0.035 14.0 5.9 0.081 12.8 5.9 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF64256 - 0.064 13.1 5.3 0.13 12.1 5.3 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3H2C3 PF17122.5 ORF64256 - 0.11 12.6 3.3 0.26 11.4 3.3 1.7 1 0 0 1 1 1 0 Zinc-finger FANCL_C PF11793.8 ORF64256 - 0.86 9.8 5.2 12 6.1 5.2 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain Exo_endo_phos PF03372.23 ORF63859 - 5.7e-07 29.3 0.0 9.9e-07 28.5 0.0 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family KKLCAg1 PF15204.6 ORF63319 - 0.81 9.8 0.1 0.81 9.8 0.1 2.7 3 0 0 3 3 3 0 Kita-kyushu lung cancer antigen 1 Methyltransf_21 PF05050.12 ORF62227 - 6.4e-05 23.0 0.1 0.00013 22.1 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase FkbM domain Methyltransf_22 PF13383.6 ORF62227 - 0.084 12.4 0.3 2.1 7.9 0.4 2.0 2 0 0 2 2 2 0 Methyltransferase domain Ion_trans PF00520.31 ORF60478 - 3.2e-11 42.9 11.9 3.2e-11 42.9 11.9 3.0 2 1 1 3 3 3 1 Ion transport protein PKD_channel PF08016.12 ORF60478 - 8.5e-09 34.6 11.8 8.5e-09 34.6 11.8 2.0 2 0 0 2 2 2 1 Polycystin cation channel RCC1_2 PF13540.6 ORF58059 - 4.5e-10 39.1 2.1 0.23 11.3 0.0 4.6 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF58059 - 0.00063 19.9 0.2 2.2 8.3 0.1 3.8 3 1 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 PH_TFIIH PF08567.11 ORF58059 - 0.00093 19.5 5.2 10 6.5 0.0 4.3 3 2 2 5 5 5 2 TFIIH p62 subunit, N-terminal domain XRCC1_N PF01834.16 ORF58059 - 0.096 12.7 2.2 14 5.6 0.1 3.2 1 1 3 4 4 4 0 XRCC1 N terminal domain Spidroin_N PF16763.5 ORF58059 - 0.6 10.1 3.2 4.5 7.3 0.1 2.8 2 1 1 3 3 3 0 Major ampullate spidroin 1, spider silk protein 1, N-term S1 PF00575.23 ORF57975 - 7.4e-06 26.2 0.2 0.00021 21.5 0.0 2.3 2 1 0 2 2 2 1 S1 RNA binding domain PKcGMP_CC PF16808.5 ORF57570 - 0.038 13.9 0.5 0.063 13.1 0.5 1.2 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Gal4_dimer PF03902.13 ORF57570 - 0.23 11.7 0.2 0.38 10.9 0.2 1.3 1 0 0 1 1 1 0 Gal4-like dimerisation domain OTU PF02338.19 ORF54512 - 8.6e-07 29.5 0.0 1.2e-06 29.0 0.0 1.2 1 0 0 1 1 1 1 OTU-like cysteine protease eIF3g PF12353.8 ORF54512 - 0.0084 16.5 0.6 0.016 15.6 0.6 1.4 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit G Ribosomal_L17 PF01196.19 ORF54512 - 0.045 14.7 0.0 0.065 14.1 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L17 DUF2624 PF11116.8 ORF53789 - 0.021 15.7 0.0 0.067 14.1 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2624) Pox_F11 PF04943.12 ORF53041 - 0.00096 18.3 0.1 0.0013 17.9 0.1 1.2 1 0 0 1 1 1 1 Poxvirus F11 protein Snf7 PF03357.21 ORF53041 - 0.018 14.7 8.1 0.0096 15.5 5.8 1.7 1 1 0 1 1 1 0 Snf7 Rho_Binding PF08912.11 ORF53041 - 0.02 15.7 7.3 2 9.3 1.3 2.8 2 0 0 2 2 2 0 Rho Binding ALG11_N PF15924.5 ORF53041 - 0.092 12.8 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus DUF1192 PF06698.11 ORF53041 - 0.8 9.8 6.3 4.5 7.4 2.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1192) DivIC PF04977.15 ORF53041 - 5.8 6.8 10.4 0.81 9.5 2.8 2.6 2 0 0 2 2 2 0 Septum formation initiator FlxA PF14282.6 ORF53041 - 6.3 6.8 11.2 6.1 6.9 1.6 2.9 2 1 0 2 2 2 0 FlxA-like protein DUF4407 PF14362.6 ORF53041 - 6.9 5.9 14.6 19 4.5 14.4 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Syntaxin-6_N PF09177.11 ORF53041 - 7.6 7.2 9.7 1e+03 0.3 9.5 3.0 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Pepdidase_M14_N PF18027.1 ORF49215 - 8.4e-12 45.4 0.0 1.3e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain Coa1 PF08695.10 ORF4542 - 0.095 12.5 0.1 0.36 10.6 0.1 2.0 2 1 0 2 2 2 0 Cytochrome oxidase complex assembly protein 1 Glyco_hydro_15 PF00723.21 ORF44966 - 3e-09 36.2 0.0 1.6e-08 33.8 0.0 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 15 ABC_tran PF00005.27 ORF42245 - 2.3e-29 102.6 0.0 3.8e-29 102.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF42245 - 2.1e-07 30.6 0.4 6.4e-05 22.5 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF42245 - 0.00075 19.6 0.2 0.0026 17.8 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF42245 - 0.0038 17.3 0.0 0.0085 16.2 0.0 1.6 1 0 0 1 1 1 1 Immunity protein 58 AAA_29 PF13555.6 ORF42245 - 0.01 15.6 0.0 0.026 14.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 ORF42245 - 0.013 16.0 0.1 0.021 15.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 ORF42245 - 0.014 15.1 0.0 0.023 14.4 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain DUF87 PF01935.17 ORF42245 - 0.016 15.3 0.0 0.035 14.2 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain NTPase_1 PF03266.15 ORF42245 - 0.017 15.0 0.6 0.28 11.1 0.1 2.3 2 0 0 2 2 2 0 NTPase AAA_24 PF13479.6 ORF42245 - 0.029 14.1 0.3 0.047 13.4 0.2 1.5 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF42245 - 0.03 14.1 0.1 0.48 10.2 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF42245 - 0.03 13.3 0.0 0.052 12.5 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_23 PF13476.6 ORF42245 - 0.034 14.7 1.3 0.044 14.3 0.2 1.7 2 1 0 2 2 2 0 AAA domain AAA PF00004.29 ORF42245 - 0.042 14.3 0.1 0.44 11.0 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF42245 - 0.042 13.9 0.4 10 6.2 0.0 2.8 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 ORF42245 - 0.047 14.1 0.7 0.97 9.8 0.1 2.2 2 0 0 2 2 2 0 RNA helicase CbiA PF01656.23 ORF42245 - 0.054 13.6 0.1 0.1 12.6 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.6 ORF42245 - 0.13 11.9 0.2 0.61 9.8 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF42245 - 0.16 12.2 1.1 0.87 9.9 1.1 2.1 1 1 0 1 1 1 0 AAA domain Pkinase PF00069.25 ORF41212 - 1.5e-46 159.0 0.0 2.1e-46 158.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41212 - 3.4e-36 124.9 0.0 4.4e-36 124.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF41212 - 5e-08 32.6 0.0 8.3e-08 31.9 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF41212 - 0.00068 18.5 0.0 0.00091 18.1 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF41212 - 0.02 14.3 0.1 0.029 13.7 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF41212 - 0.027 13.4 0.2 0.067 12.1 0.0 1.7 2 0 0 2 2 2 0 Haspin like kinase domain zf-RING_2 PF13639.6 ORF40349 - 5.4e-10 39.4 8.0 8.3e-10 38.9 8.0 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF40349 - 1.8e-06 27.7 5.6 2.9e-06 27.0 5.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF40349 - 4.2e-06 27.0 4.0 8e-06 26.0 4.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF40349 - 7.6e-06 25.6 2.1 1.4e-05 24.7 2.1 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF40349 - 5e-05 23.0 9.4 9e-05 22.2 9.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) WWE PF02825.20 ORF40349 - 0.00025 21.6 1.6 0.00045 20.8 0.5 2.1 2 1 0 2 2 1 1 WWE domain zf-RING_5 PF14634.6 ORF40349 - 0.00027 20.9 6.2 0.00044 20.1 6.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_1 PF14446.6 ORF40349 - 0.00072 19.4 5.5 0.0039 17.1 5.5 2.0 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 Zn_ribbon_17 PF17120.5 ORF40349 - 0.0012 18.4 4.6 0.0012 18.4 4.6 1.6 2 0 0 2 2 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF40349 - 0.0053 16.8 4.4 0.013 15.5 4.4 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF40349 - 0.012 15.6 8.1 0.022 14.8 8.1 1.5 1 0 0 1 1 1 0 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF40349 - 0.022 14.6 6.3 0.039 13.8 6.3 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF40349 - 0.035 14.0 5.9 0.081 12.8 5.9 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF40349 - 0.064 13.1 5.3 0.13 12.1 5.3 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3H2C3 PF17122.5 ORF40349 - 0.11 12.6 3.3 0.26 11.4 3.3 1.7 1 0 0 1 1 1 0 Zinc-finger FANCL_C PF11793.8 ORF40349 - 0.86 9.8 5.2 12 6.1 5.2 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain adh_short PF00106.25 ORF39033 - 1.1e-22 80.5 0.0 1.5e-22 80.0 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF39033 - 8.5e-22 77.9 0.0 1.1e-21 77.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF834 PF05754.14 ORF378 - 6.6 6.8 8.2 15 5.7 0.2 3.5 3 1 2 5 5 5 0 Domain of unknown function (DUF834) Ank_2 PF12796.7 ORF37143 - 4.3e-09 36.8 0.1 4.1e-05 24.1 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF37143 - 3.7e-08 33.8 0.1 2e-05 25.0 0.0 3.0 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF37143 - 5.7e-06 26.3 2.2 0.00043 20.5 0.0 3.5 4 0 0 4 4 4 1 Ankyrin repeat Ank PF00023.30 ORF37143 - 2.2e-05 24.7 0.9 0.0084 16.5 0.0 2.9 2 1 1 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF37143 - 0.0049 17.2 6.0 0.011 16.1 0.1 3.6 3 1 1 4 4 4 1 Ankyrin repeats (many copies) PHBC_N PF12551.8 ORF37143 - 0.0055 16.5 0.2 0.012 15.4 0.2 1.5 1 0 0 1 1 1 1 Poly-beta-hydroxybutyrate polymerase N terminal Glyco_transf_92 PF01697.27 ORF35036 - 0.0053 16.5 0.0 0.011 15.4 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase family 92 Glyco_tranf_2_4 PF13704.6 ORF35036 - 0.045 14.3 0.1 0.37 11.3 0.0 2.3 2 1 0 2 2 2 0 Glycosyl transferase family 2 DUF3895 PF13034.6 ORF31567 - 0.32 11.0 3.7 10 6.2 0.3 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3895) DUF2460 PF09343.10 ORF30226 - 0.011 15.2 0.1 0.015 14.8 0.1 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 2217 (DUF2460) cNMP_binding PF00027.29 ORF30226 - 0.061 13.4 0.1 0.23 11.5 0.0 2.0 2 0 0 2 2 2 0 Cyclic nucleotide-binding domain Amidase PF01425.21 ORF27525 - 1.8e-16 60.2 0.0 1.9e-16 60.1 0.0 1.0 1 0 0 1 1 1 1 Amidase MraZ PF02381.18 ORF26363 - 0.11 12.5 0.0 8.6 6.4 0.0 2.3 2 0 0 2 2 2 0 MraZ protein, putative antitoxin-like DUF4973 PF16343.5 ORF26103 - 0.088 12.9 0.3 0.14 12.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4973) Proton_antipo_M PF00361.20 ORF25919 - 0.00033 20.0 1.6 0.00033 20.0 1.6 1.9 2 0 0 2 2 2 1 Proton-conducting membrane transporter CPP1-like PF11833.8 ORF25919 - 0.77 9.4 2.7 0.67 9.6 0.7 1.8 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like SIR2 PF02146.17 ORF25871 - 1.6e-07 31.4 0.0 2.4e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 Sir2 family ABC_tran PF00005.27 ORF25502 - 3.6e-29 102.0 0.0 6e-29 101.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF25502 - 9.8e-09 35.0 0.4 3e-06 26.8 0.2 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF25502 - 0.00077 19.5 0.2 0.0027 17.8 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase NTPase_1 PF03266.15 ORF25502 - 0.0093 15.9 0.7 0.4 10.6 0.0 2.3 2 0 0 2 2 2 1 NTPase AAA_29 PF13555.6 ORF25502 - 0.012 15.3 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 ORF25502 - 0.013 15.9 0.2 0.17 12.3 0.2 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 ORF25502 - 0.014 15.9 0.0 0.024 15.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF25502 - 0.015 15.4 0.1 0.039 14.0 0.0 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain RNA_helicase PF00910.22 ORF25502 - 0.016 15.6 0.9 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase MeaB PF03308.16 ORF25502 - 0.025 13.6 0.0 0.042 12.8 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_23 PF13476.6 ORF25502 - 0.03 14.8 1.7 0.048 14.2 0.1 1.9 2 1 0 2 2 2 0 AAA domain CbiA PF01656.23 ORF25502 - 0.045 13.8 0.1 0.075 13.1 0.1 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ATP_bind_1 PF03029.17 ORF25502 - 0.045 13.5 0.2 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 ORF25502 - 0.048 13.4 0.2 0.076 12.7 0.2 1.5 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 ORF25502 - 0.061 12.4 0.3 2.1 7.4 0.0 2.5 2 1 0 2 2 2 0 Type II/IV secretion system protein IstB_IS21 PF01695.17 ORF25502 - 0.11 12.2 0.1 1.7 8.3 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF3911 PF13050.6 ORF25502 - 0.16 12.1 0.4 0.6 10.3 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3911) AAA_22 PF13401.6 ORF25502 - 0.16 12.3 1.1 0.92 9.8 1.1 2.1 1 1 0 1 1 1 0 AAA domain Anoctamin PF04547.12 ORF2423 - 8e-21 74.4 0.2 9.1e-21 74.2 0.2 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel SUR7 PF06687.12 ORF2423 - 0.028 14.0 0.2 0.043 13.5 0.2 1.2 1 0 0 1 1 1 0 SUR7/PalI family Lipase_3 PF01764.25 ORF23106 - 2.9e-12 46.6 0.0 4.4e-12 46.1 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF23106 - 0.00022 21.9 0.5 0.00029 21.5 0.5 1.2 1 1 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 ORF23106 - 0.026 14.2 0.1 0.039 13.6 0.1 1.3 1 0 0 1 1 1 0 Putative esterase Thioesterase PF00975.20 ORF23106 - 0.032 14.3 0.1 0.05 13.7 0.1 1.5 1 1 0 1 1 1 0 Thioesterase domain Abhydrolase_1 PF00561.20 ORF23106 - 0.075 12.7 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 alpha/beta hydrolase fold Acetate_kinase PF00871.17 ORF22880 - 6.5e-116 387.2 0.1 7.2e-116 387.1 0.1 1.0 1 0 0 1 1 1 1 Acetokinase family BcrAD_BadFG PF01869.20 ORF22880 - 0.0093 15.5 0.2 0.02 14.4 0.2 1.7 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family DSPc PF00782.20 ORF21385 - 3.2e-26 91.7 0.0 4.2e-26 91.3 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF21385 - 0.00025 20.7 0.0 0.00035 20.2 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF21385 - 0.023 14.8 0.0 0.032 14.3 0.0 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate Myotub-related PF06602.14 ORF21385 - 0.033 13.1 0.0 0.044 12.7 0.0 1.1 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain CDKN3 PF05706.12 ORF21385 - 0.05 13.3 0.1 0.083 12.5 0.1 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase3 PF13350.6 ORF21385 - 0.13 12.3 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family ADH_zinc_N_2 PF13602.6 ORF20987 - 3.1e-22 80.1 0.2 6.4e-22 79.0 0.1 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 ORF20987 - 2.6e-15 56.6 0.3 4.8e-15 55.7 0.2 1.6 1 1 0 1 1 1 1 Zinc-binding dehydrogenase CbiG_N PF11760.8 ORF20987 - 0.0027 17.7 0.9 0.0081 16.1 0.4 2.1 2 0 0 2 2 2 1 Cobalamin synthesis G N-terminal Lipase_3 PF01764.25 ORF20850 - 2.8e-12 46.7 0.0 3.8e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF20850 - 0.062 13.9 2.1 0.088 13.4 2.1 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF3089 PF11288.8 ORF20850 - 0.067 12.7 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) DUF915 PF06028.11 ORF20850 - 0.3 10.4 0.0 0.43 9.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) ADH_zinc_N PF00107.26 ORF1580 - 0.01 15.8 0.4 0.017 15.1 0.4 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase TPR_19 PF14559.6 ORF1580 - 7 7.2 7.0 0.45 11.1 2.1 1.6 2 0 0 2 2 2 0 Tetratricopeptide repeat ABC_tran PF00005.27 ORF15488 - 9.1e-29 100.7 0.0 1.5e-28 100.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF15488 - 1.9e-07 30.8 0.4 5.8e-05 22.6 0.2 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF15488 - 0.00081 19.5 0.3 0.0016 18.5 0.3 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF15488 - 0.0036 17.4 0.0 0.0085 16.2 0.0 1.6 1 0 0 1 1 1 1 Immunity protein 58 AAA_29 PF13555.6 ORF15488 - 0.0098 15.6 0.0 0.026 14.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF15488 - 0.018 15.1 0.0 0.039 14.0 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain NTPase_1 PF03266.15 ORF15488 - 0.022 14.7 0.5 0.38 10.7 0.1 2.3 2 0 0 2 2 2 0 NTPase MeaB PF03308.16 ORF15488 - 0.025 13.6 0.0 0.042 12.8 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA PF00004.29 ORF15488 - 0.027 14.9 0.1 0.32 11.4 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 ORF15488 - 0.027 15.0 0.9 0.048 14.2 0.1 1.7 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF15488 - 0.033 14.2 0.3 13 5.8 0.0 2.8 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF15488 - 0.036 14.6 0.1 0.063 13.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF15488 - 0.041 13.7 0.1 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein CbiA PF01656.23 ORF15488 - 0.046 13.8 0.1 0.093 12.8 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_24 PF13479.6 ORF15488 - 0.046 13.4 0.3 0.073 12.8 0.3 1.4 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF15488 - 0.054 13.9 0.5 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA_30 PF13604.6 ORF15488 - 0.097 12.4 0.1 0.3 10.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF15488 - 0.18 11.4 0.0 0.58 9.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 ORF15488 - 0.18 12.1 1.3 1 9.7 1.3 2.1 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF15488 - 0.2 10.9 0.1 0.55 9.5 0.0 1.7 2 0 0 2 2 2 0 Zeta toxin AMP_N PF05195.16 ORF12991 - 7.6e-17 61.2 0.1 1.1e-16 60.7 0.1 1.2 1 0 0 1 1 1 1 Aminopeptidase P, N-terminal domain Peptidase_M24 PF00557.24 ORF12991 - 0.00035 20.3 0.0 0.00086 19.0 0.0 1.6 2 0 0 2 2 2 1 Metallopeptidase family M24 MGDG_synth PF06925.11 ORF12991 - 0.012 15.8 0.0 0.024 14.7 0.0 1.5 1 0 0 1 1 1 0 Monogalactosyldiacylglycerol (MGDG) synthase Glycos_transf_1 PF00534.20 ORF12852 - 2.5e-25 89.0 0.0 7.5e-25 87.4 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF12852 - 1.1e-18 68.0 0.0 1.7e-18 67.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF12852 - 0.00017 21.9 0.1 0.0018 18.6 0.0 2.5 2 1 0 2 2 2 1 Glycosyl transferases group 1 TetR_C_20 PF17925.1 ORF12852 - 0.015 15.6 0.3 0.037 14.3 0.3 1.6 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain 3HCDH_N PF02737.18 ORF12852 - 0.026 14.4 1.1 0.068 13.0 0.4 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ETRAMP PF09716.10 ORF12809 - 0.1 12.7 0.3 1.2 9.2 0.0 2.4 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) OAD_gamma PF04277.13 ORF12809 - 0.27 11.8 0.0 0.27 11.8 0.0 2.0 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain SIT PF15330.6 ORF12809 - 0.45 11.0 2.1 13 6.3 0.4 2.4 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT NS3_envE PF02723.14 ORF12809 - 8.1 6.6 9.9 0.64 10.1 0.6 2.3 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E zf-C3HC4_3 PF13920.6 ORF106200 - 5.7e-07 29.3 13.3 6.9e-07 29.0 11.0 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF106200 - 8.4e-07 28.8 11.6 5.2e-05 23.0 12.4 2.7 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF106200 - 6.4e-06 25.9 14.8 6.4e-06 25.9 14.8 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF106200 - 6.6e-06 26.4 13.7 6.6e-06 26.4 13.7 2.5 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_4 PF15227.6 ORF106200 - 0.0016 18.6 19.1 0.0021 18.2 13.7 3.0 2 1 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF106200 - 0.0023 17.9 13.9 0.075 13.0 14.5 2.8 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF106200 - 0.0033 17.3 19.7 0.004 17.0 14.5 2.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF106200 - 0.0056 16.9 10.7 0.027 14.7 10.7 2.2 1 1 0 1 1 1 1 RING-H2 zinc finger domain TaqI_C PF12950.7 ORF106200 - 0.11 12.5 0.3 0.11 12.5 0.3 1.8 2 0 0 2 2 2 0 TaqI-like C-terminal specificity domain zf-RING_UBOX PF13445.6 ORF106200 - 0.69 10.0 19.1 0.45 10.6 12.9 3.2 2 1 0 2 2 2 0 RING-type zinc-finger FYVE PF01363.21 ORF106200 - 3.8 7.7 17.4 2.1 8.6 13.6 2.3 2 1 0 2 2 2 0 FYVE zinc finger Ank_2 PF12796.7 ORF103429 - 7.6e-08 32.8 0.3 0.00055 20.5 0.3 3.2 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF103429 - 0.0008 19.7 0.6 1.3 9.8 0.0 4.0 4 0 0 4 4 4 1 Ankyrin repeat Herpes_UL36 PF03586.13 ORF103429 - 0.01 15.2 0.0 0.024 14.0 0.0 1.6 2 0 0 2 2 2 0 Herpesvirus UL36 tegument protein Ank_5 PF13857.6 ORF103429 - 0.011 16.1 0.4 0.22 11.9 0.1 3.2 3 1 0 3 3 3 0 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF103429 - 0.033 14.8 1.1 15 6.3 0.0 3.5 3 1 0 3 3 3 0 Ankyrin repeats (many copies) KKLCAg1 PF15204.6 ORF103238 - 0.81 9.8 0.1 0.81 9.8 0.1 2.7 3 0 0 3 3 3 0 Kita-kyushu lung cancer antigen 1 RicinB_lectin_2 PF14200.6 ORF101706 - 0.0042 17.8 0.2 0.14 12.9 0.1 2.5 2 1 2 4 4 4 3 Ricin-type beta-trefoil lectin domain-like GAS2 PF02187.17 ORF101706 - 0.15 12.2 0.0 19 5.4 0.0 2.6 3 0 0 3 3 3 0 Growth-Arrest-Specific Protein 2 Domain TonB_dep_Rec PF00593.24 NODE_29882_length_728_cov_2.245310_g23591_i0forward_frame_1 - 4.6e-18 66.3 14.9 5.5e-18 66.1 14.9 1.0 1 0 0 1 1 1 1 TonB dependent receptor AA_permease PF00324.21 NODE_29881_length_728_cov_3.290043_g23590_i0reverse_frame_1 - 7e-26 90.8 11.4 9.5e-26 90.4 11.4 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_29881_length_728_cov_3.290043_g23590_i0reverse_frame_1 - 1.8e-05 23.7 9.2 2.6e-05 23.3 9.2 1.2 1 0 0 1 1 1 1 Amino acid permease YbgT_YccB PF08173.11 NODE_29878_length_728_cov_3.613276_g23587_i0forward_frame_1 - 1.1e-09 38.2 4.0 2.2e-09 37.3 4.0 1.5 1 0 0 1 1 1 1 Membrane bound YbgT-like protein SNARE_assoc PF09335.11 NODE_29875_length_728_cov_50.031746_g23584_i0forward_frame_1 - 2.4e-18 66.8 0.4 5.2e-18 65.7 0.4 1.6 1 0 0 1 1 1 1 SNARE associated Golgi protein zf-CRD PF17979.1 NODE_29860_length_728_cov_198.222222_g23570_i0forward_frame_1 - 0.97 9.5 6.6 2.8 8.0 1.5 2.2 2 0 0 2 2 2 0 Cysteine rich domain with multizinc binding regions YbaJ PF10757.9 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_1 - 0.1 13.1 0.1 0.19 12.3 0.1 1.4 1 0 0 1 1 1 0 Biofilm formation regulator YbaJ Aa_trans PF01490.18 NODE_29789_length_730_cov_4.313669_g23509_i0forward_frame_2 - 2.2e-09 36.5 0.2 2.4e-09 36.4 0.2 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Polysacc_synt PF01943.17 NODE_29789_length_730_cov_4.313669_g23509_i0forward_frame_2 - 0.011 15.1 4.6 0.016 14.6 4.6 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF4013 PF13197.6 NODE_29789_length_730_cov_4.313669_g23509_i0forward_frame_2 - 0.073 12.9 8.2 0.11 12.4 8.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) VMA21 PF09446.10 NODE_29789_length_730_cov_4.313669_g23509_i0forward_frame_2 - 0.18 11.9 6.0 0.21 11.7 0.6 2.4 2 1 0 2 2 2 0 VMA21-like domain ERGIC_N PF13850.6 NODE_29772_length_730_cov_97.666187_g23492_i0reverse_frame_3 - 0.0001 22.5 0.2 0.00025 21.3 0.2 1.6 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Fungal_trans PF04082.18 NODE_29772_length_730_cov_97.666187_g23492_i0forward_frame_3 - 0.022 13.8 2.9 0.035 13.1 2.4 1.4 1 1 0 1 1 1 0 Fungal specific transcription factor domain Plasmo_rep PF12135.8 NODE_29772_length_730_cov_97.666187_g23492_i0forward_frame_3 - 0.41 10.2 6.5 0.11 12.1 2.0 2.3 2 0 0 2 2 2 0 Plasmodium repeat family Paired_CXXCH_1 PF09699.10 NODE_29771_length_730_cov_97.717986_g23491_i0reverse_frame_2 - 0.01 15.5 2.4 0.21 11.4 0.2 2.4 2 0 0 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) Mga PF05043.13 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.035 14.7 2.8 0.035 14.7 2.8 2.0 2 1 0 2 2 2 0 Mga helix-turn-helix domain AAA_23 PF13476.6 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.069 13.6 19.3 1.8 9.0 16.4 2.0 1 1 1 2 2 2 0 AAA domain DUF281 PF03436.13 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.089 13.2 0.4 0.14 12.5 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF281) DUF4407 PF14362.6 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.18 11.1 10.8 0.1 11.9 9.0 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) KxDL PF10241.9 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.34 11.2 13.5 0.79 10.0 6.9 2.8 2 2 0 2 2 2 0 Uncharacterized conserved protein CHD5 PF04420.14 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.56 10.0 13.1 0.14 12.0 8.5 2.1 2 0 0 2 2 2 0 CHD5-like protein MatP_C PF17414.2 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 3.8 7.8 8.4 2.1 8.6 2.5 3.1 3 1 0 3 3 3 0 MatP C-terminal ribbon-helix-helix domain Com_YlbF PF06133.11 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 3.9 8.1 25.0 98 3.6 0.1 3.4 1 1 2 3 3 3 0 Control of competence regulator ComK, YlbF/YmcA VWA PF00092.28 NODE_29767_length_730_cov_118.761151_g23465_i1forward_frame_3 - 5.7e-05 23.4 1.1 0.00014 22.1 0.4 2.0 1 1 1 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 NODE_29767_length_730_cov_118.761151_g23465_i1forward_frame_3 - 0.0008 20.0 0.0 0.0018 18.9 0.0 1.6 1 1 0 1 1 1 1 von Willebrand factor type A domain DUF3357 PF11837.8 NODE_29742_length_731_cov_8.238506_g23473_i0reverse_frame_3 - 0.047 14.1 0.6 4.1 7.9 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF3357) Orf78 PF06024.12 NODE_29742_length_731_cov_8.238506_g23473_i0reverse_frame_3 - 0.055 13.8 5.8 8.3 6.8 5.8 2.6 1 1 0 1 1 1 0 Orf78 (ac78) Pox_A14 PF05767.12 NODE_29742_length_731_cov_8.238506_g23473_i0reverse_frame_3 - 0.13 12.4 0.5 0.51 10.5 0.1 2.0 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 LAP1C PF05609.12 NODE_29742_length_731_cov_8.238506_g23473_i0reverse_frame_3 - 0.28 10.2 8.2 0.36 9.9 8.2 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) LAP1C PF05609.12 NODE_29742_length_731_cov_8.238506_g23473_i0reverse_frame_2 - 0.028 13.5 10.9 0.036 13.2 10.9 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Macoilin PF09726.9 NODE_29742_length_731_cov_8.238506_g23473_i0reverse_frame_2 - 0.28 9.7 17.4 0.35 9.4 17.4 1.0 1 0 0 1 1 1 0 Macoilin family adh_short PF00106.25 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 7.9e-29 100.5 0.0 9e-29 100.3 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 7.8e-14 51.8 0.0 1.1e-13 51.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 0.00019 21.4 0.0 0.00026 20.9 0.0 1.2 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 0.065 12.9 0.0 0.12 12.1 0.0 1.5 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF1776 PF08643.10 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 0.081 12.3 0.0 0.16 11.3 0.0 1.5 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) TrkA_C PF02080.21 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 0.18 11.7 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-C domain SWIM PF04434.17 NODE_29704_length_732_cov_89.707317_g23443_i0reverse_frame_2 - 0.39 10.4 10.0 3.1 7.6 0.4 3.6 3 0 0 3 3 3 0 SWIM zinc finger PPR_2 PF13041.6 NODE_29698_length_732_cov_126.129125_g23438_i0forward_frame_2 - 0.00095 19.3 0.0 3.1 8.1 0.0 2.9 2 1 1 3 3 3 2 PPR repeat family DUF4211 PF13926.6 NODE_29691_length_732_cov_169.173601_g23431_i0reverse_frame_2 - 0.075 13.1 0.1 0.26 11.3 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4211) DUF2709 PF10915.8 NODE_29691_length_732_cov_169.173601_g23431_i0forward_frame_2 - 0.12 11.7 1.8 2.5 7.3 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2709) Ribosomal_S24e PF01282.19 NODE_29665_length_732_cov_2608.100430_g23409_i0reverse_frame_2 - 1.3e-25 89.1 0.2 1.3e-25 89.1 0.2 2.1 2 0 0 2 2 2 1 Ribosomal protein S24e NPCC PF08058.11 NODE_29665_length_732_cov_2608.100430_g23409_i0forward_frame_3 - 8.5 6.4 15.3 0.5 10.4 9.2 2.0 1 1 1 2 2 2 0 Nuclear pore complex component DUF3862 PF12978.7 ORF95076 - 0.0059 16.4 0.3 0.018 14.8 0.1 1.9 2 0 0 2 2 2 1 Domain of Unknown Function with PDB structure (DUF3862) HsbA PF12296.8 ORF95076 - 0.048 14.1 0.1 0.14 12.6 0.0 1.8 2 0 0 2 2 2 0 Hydrophobic surface binding protein A Sbi-IV PF11621.8 ORF95076 - 0.19 12.1 2.9 1.1 9.7 0.2 2.9 2 1 1 3 3 3 0 C3 binding domain 4 of IgG-bind protein SBI Oxysterol_BP PF01237.18 ORF93310 - 7.4e-61 206.0 8.1 1.8e-60 204.7 8.1 1.6 1 1 0 1 1 1 1 Oxysterol-binding protein Aldedh PF00171.22 ORF91278 - 6.8e-28 97.4 0.2 7.8e-28 97.2 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family 2OG-FeII_Oxy PF03171.20 ORF90805 - 4.3e-18 65.7 0.0 6.2e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily COesterase PF00135.28 ORF86776 - 4.8e-06 25.7 0.3 3.8e-05 22.7 0.3 1.9 1 1 0 1 1 1 1 Carboxylesterase family OB_NTP_bind PF07717.16 ORF86 - 1.6e-14 54.0 0.1 3e-14 53.1 0.1 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 ORF86 - 0.024 15.0 0.0 0.062 13.6 0.0 1.6 2 0 0 2 2 2 0 Helicase conserved C-terminal domain NnrU PF07298.11 ORF85584 - 0.0013 18.2 1.8 0.061 12.8 0.3 2.1 2 0 0 2 2 2 2 NnrU protein Aa_trans PF01490.18 ORF85452 - 2.6e-35 121.9 16.9 3.1e-35 121.7 16.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Tetraspanin PF00335.20 ORF85452 - 0.025 14.3 1.2 0.025 14.3 1.2 2.1 2 0 0 2 2 2 0 Tetraspanin family Pox_A51 PF04948.13 ORF85452 - 0.044 12.6 0.2 0.073 11.9 0.2 1.3 1 0 0 1 1 1 0 Poxvirus A51 protein Oxidored_q4 PF00507.19 ORF85452 - 6.6 7.0 9.9 1.4 9.1 2.9 2.9 3 0 0 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TPR_12 PF13424.6 ORF84342 - 5.3e-21 74.7 9.1 3.3e-11 43.3 0.7 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF84342 - 7.5e-12 44.7 5.8 8e-06 25.5 0.1 4.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF84342 - 5.2e-09 35.9 5.9 0.00025 20.6 0.4 2.0 1 1 1 2 2 2 2 MalT-like TPR region TPR_2 PF07719.17 ORF84342 - 1e-07 31.5 9.9 0.098 12.8 0.2 5.6 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF84342 - 2.9e-07 30.0 7.0 0.028 14.3 0.0 4.8 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF84342 - 3.4e-07 30.0 5.6 0.024 14.8 0.0 5.2 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF84342 - 4.4e-06 26.3 3.2 0.12 12.4 0.1 5.0 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF84342 - 0.00048 20.7 12.8 0.15 13.0 0.6 5.4 4 2 2 6 6 6 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF84342 - 0.024 15.3 3.3 0.024 15.3 3.3 4.2 4 2 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF84342 - 0.3 11.8 5.1 27 5.7 0.1 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF84342 - 0.41 11.2 7.5 2.1 8.9 1.5 3.6 1 1 3 4 4 4 0 Tetratricopeptide repeat F-actin_cap_A PF01267.17 ORF83507 - 8.2e-36 123.8 3.1 1.1e-35 123.4 3.1 1.1 1 0 0 1 1 1 1 F-actin capping protein alpha subunit Abhydrolase_6 PF12697.7 ORF81692 - 1.7e-06 28.8 0.1 2.1e-06 28.5 0.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF81692 - 0.037 13.3 0.0 0.06 12.6 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Thioesterase PF00975.20 ORF81692 - 0.084 13.0 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain MRP-S34 PF16053.5 ORF81692 - 0.1 12.3 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S34 Ser_hydrolase PF06821.13 ORF81692 - 0.11 12.3 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Serine hydrolase Abhydrolase_1 PF00561.20 ORF81692 - 0.18 11.4 0.0 0.3 10.7 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold PI31_Prot_N PF11566.8 ORF81167 - 0.0023 17.8 0.1 0.0028 17.5 0.1 1.1 1 0 0 1 1 1 1 PI31 proteasome regulator N-terminal Proteasome PF00227.26 ORF80743 - 1.7e-52 177.7 0.0 2e-52 177.4 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF80743 - 2.6e-06 27.0 0.0 5.2e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature ABC_transp_aux PF09822.9 ORF80743 - 0.021 14.3 0.0 0.021 14.3 0.0 1.2 1 0 0 1 1 1 0 ABC-type uncharacterized transport system GST_N PF02798.20 ORF7696 - 1.2e-14 54.4 0.0 2.6e-14 53.3 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF7696 - 9e-14 51.5 0.1 4e-13 49.4 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF7696 - 6.6e-06 26.4 0.0 1.3e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF7696 - 8.2e-05 22.8 0.0 0.00023 21.3 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF7696 - 8.7e-05 22.5 0.1 0.00019 21.4 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF7696 - 0.01 16.1 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Aldedh PF00171.22 ORF74468 - 6.8e-28 97.4 0.2 7.8e-28 97.2 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ABC_tran PF00005.27 ORF74450 - 2.2e-15 57.4 0.0 5.2e-15 56.2 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF74450 - 1.9e-10 41.0 0.0 2.8e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF74450 - 0.00042 19.8 0.1 0.00091 18.7 0.0 1.6 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF74450 - 0.038 14.2 0.0 0.64 10.3 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DIM1 PF02966.16 ORF74450 - 0.06 13.1 0.1 0.26 11.1 0.0 1.9 2 0 0 2 2 2 0 Mitosis protein DIM1 Cadherin-like PF12733.7 ORF74432 - 0.099 13.2 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 Cadherin-like beta sandwich domain peroxidase PF00141.23 ORF71796 - 2.1e-28 99.6 0.0 3.9e-28 98.7 0.0 1.3 1 1 0 1 1 1 1 Peroxidase Aldedh PF00171.22 ORF71732 - 1.3e-27 96.4 0.2 1.5e-27 96.2 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family IRK_C PF17655.1 ORF71415 - 5.8e-19 68.4 0.0 1.1e-09 38.2 0.0 2.1 2 0 0 2 2 2 2 Inward rectifier potassium channel C-terminal domain JmjN PF02375.17 ORF69732 - 6.6e-09 35.6 0.5 6.6e-09 35.6 0.5 2.1 2 0 0 2 2 2 1 jmjN domain Saf_2TM PF18303.1 ORF69732 - 0.014 15.0 0.1 0.025 14.2 0.1 1.3 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain GST_N PF02798.20 ORF68688 - 1.2e-14 54.4 0.0 2.6e-14 53.3 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF68688 - 9e-14 51.5 0.1 4e-13 49.4 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF68688 - 6.6e-06 26.4 0.0 1.3e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF68688 - 8.4e-05 22.7 0.0 0.00023 21.3 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF68688 - 9e-05 22.4 0.1 0.00019 21.4 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF68688 - 0.01 16.1 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Pribosyltran PF00156.27 ORF65402 - 2.9e-08 33.4 0.0 4.6e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 ORF65402 - 0.0029 17.1 0.0 0.0071 15.9 0.0 1.6 2 0 0 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.6 ORF65402 - 0.0036 16.8 0.0 0.0059 16.1 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Terminase_5 PF06056.12 ORF65402 - 0.052 13.4 0.0 0.16 11.9 0.0 1.8 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) DZR PF12773.7 ORF65402 - 0.091 12.8 7.5 0.47 10.5 7.3 2.0 1 1 1 2 2 2 0 Double zinc ribbon zf-C3HC4_3 PF13920.6 ORF65402 - 0.16 11.8 9.6 0.12 12.2 5.2 2.9 1 1 2 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Pkinase PF00069.25 ORF62819 - 2.5e-31 109.0 0.0 2.3e-29 102.6 0.0 2.1 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62819 - 1e-16 61.0 0.1 4.2e-14 52.4 0.1 2.1 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF62819 - 3.4e-06 26.6 0.0 0.00026 20.4 0.0 2.2 2 0 0 2 2 2 2 Kinase-like Pkinase_fungal PF17667.1 ORF62819 - 0.00089 18.1 0.0 0.0011 17.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF62819 - 0.018 15.0 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF62819 - 0.039 13.5 0.2 0.059 13.0 0.2 1.2 1 0 0 1 1 1 0 RIO1 family Osmo_CC PF08946.10 ORF62819 - 0.087 13.1 1.6 0.087 13.1 1.6 2.2 3 0 0 3 3 3 0 Osmosensory transporter coiled coil GST_N_3 PF13417.6 ORF60685 - 1.3e-09 38.3 0.0 2.1e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF60685 - 1.6e-09 37.9 0.0 2.7e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF60685 - 1.6e-09 37.9 0.0 4e-09 36.7 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF60685 - 2.5e-09 37.2 0.0 4.8e-09 36.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF60685 - 5.3e-05 23.2 0.0 0.00012 22.0 0.0 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF60685 - 0.00015 22.0 0.0 0.00026 21.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain ABC_tran PF00005.27 ORF60358 - 2.2e-15 57.4 0.0 5.2e-15 56.2 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF60358 - 1.9e-10 41.0 0.0 2.8e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF60358 - 0.00042 19.8 0.1 0.00091 18.7 0.0 1.6 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF60358 - 0.038 14.2 0.0 0.64 10.3 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DIM1 PF02966.16 ORF60358 - 0.06 13.1 0.1 0.26 11.1 0.0 1.9 2 0 0 2 2 2 0 Mitosis protein DIM1 CLN5 PF15014.6 ORF60082 - 0.04 13.6 0.2 0.082 12.6 0.2 1.4 1 1 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 5 SHIPPO-rpt PF07004.12 ORF58054 - 1.6e-09 38.2 27.6 0.023 15.6 2.4 6.5 6 0 0 6 6 6 6 Sperm-tail PG-rich repeat Aa_trans PF01490.18 ORF57838 - 2.2e-35 122.2 16.4 2.6e-35 121.9 16.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Tetraspanin PF00335.20 ORF57838 - 0.025 14.3 1.2 0.025 14.3 1.2 2.1 2 0 0 2 2 2 0 Tetraspanin family Pox_A51 PF04948.13 ORF57838 - 0.044 12.6 0.2 0.073 11.9 0.2 1.3 1 0 0 1 1 1 0 Poxvirus A51 protein Oxidored_q4 PF00507.19 ORF57838 - 6.6 7.0 9.9 1.4 9.1 2.9 2.9 3 0 0 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Jagunal PF07086.12 ORF57838 - 9.1 6.3 8.2 0.43 10.6 0.7 2.3 2 1 1 3 3 3 0 Jagunal, ER re-organisation during oogenesis ATG16 PF08614.11 ORF57478 - 0.00021 21.6 0.7 0.00084 19.6 0.2 1.9 1 1 1 2 2 2 1 Autophagy protein 16 (ATG16) Filament PF00038.21 ORF57478 - 0.00047 19.8 0.2 0.00077 19.1 0.2 1.2 1 0 0 1 1 1 1 Intermediate filament protein ZapB PF06005.12 ORF57478 - 0.0051 17.2 0.0 4.7 7.7 0.0 2.8 3 0 0 3 3 3 1 Cell division protein ZapB Yuri_gagarin PF15934.5 ORF57478 - 0.0055 16.6 0.7 0.0088 15.9 0.7 1.3 1 0 0 1 1 1 1 Yuri gagarin DivIC PF04977.15 ORF57478 - 0.016 14.9 1.7 1 9.2 0.1 3.1 2 1 1 3 3 3 0 Septum formation initiator DUF3450 PF11932.8 ORF57478 - 0.024 13.9 0.4 0.036 13.4 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TPR_MLP1_2 PF07926.12 ORF57478 - 0.04 14.0 0.2 0.081 13.0 0.2 1.5 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein ADIP PF11559.8 ORF57478 - 0.042 13.9 0.9 0.18 11.9 0.8 1.9 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding Fez1 PF06818.15 ORF57478 - 0.049 14.1 0.1 0.08 13.4 0.1 1.4 1 0 0 1 1 1 0 Fez1 GCR PF02155.15 ORF57478 - 0.061 12.4 0.0 0.11 11.5 0.0 1.4 1 1 0 1 1 1 0 Glucocorticoid receptor TMF_DNA_bd PF12329.8 ORF57478 - 0.064 13.2 1.1 2.7 8.0 0.1 3.0 2 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF57478 - 0.14 11.0 0.2 0.21 10.4 0.2 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4407 PF14362.6 ORF57478 - 0.17 11.2 3.1 0.45 9.8 3.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF5082 PF16888.5 ORF57478 - 0.21 11.9 4.9 0.29 11.4 0.6 2.8 3 1 1 4 4 4 0 Domain of unknown function (DUF5082) adh_short_C2 PF13561.6 ORF57447 - 1.3e-53 182.0 1.2 7.9e-53 179.4 1.2 1.8 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF57447 - 1.3e-43 148.7 0.1 1.7e-43 148.4 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF57447 - 1.1e-07 32.0 0.2 1.5e-07 31.5 0.2 1.1 1 0 0 1 1 1 1 KR domain PPR_2 PF13041.6 ORF54081 - 8.4e-23 80.3 0.0 1.3e-08 34.9 0.0 3.5 1 1 3 4 4 4 4 PPR repeat family PPR_3 PF13812.6 ORF54081 - 1.4e-18 66.7 0.0 1.7e-08 34.4 0.0 3.1 1 1 3 4 4 4 4 Pentatricopeptide repeat domain PPR PF01535.20 ORF54081 - 8.8e-13 47.6 0.0 0.0071 16.5 0.0 5.1 5 0 0 5 5 5 4 PPR repeat PPR_1 PF12854.7 ORF54081 - 4.2e-10 39.1 0.0 0.64 9.8 0.0 5.6 5 1 0 5 5 5 5 PPR repeat PPR_long PF17177.4 ORF54081 - 1.6e-09 37.4 0.2 8.1e-09 35.2 0.2 1.8 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP ATP-grasp_4 PF13535.6 ORF54081 - 0.00091 18.8 0.0 0.42 10.2 0.0 2.6 1 1 2 3 3 3 2 ATP-grasp domain Ndc1_Nup PF09531.10 ORF49889 - 9.3 4.8 11.9 11 4.5 11.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup RabGAP-TBC PF00566.18 ORF49592 - 4.4e-16 59.2 0.0 5.7e-16 58.8 0.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF2951 PF11166.8 ORF48519 - 0.12 12.6 0.2 0.55 10.5 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) FOP_dimer PF09398.10 ORF45305 - 6.3e-15 55.2 0.1 1.3e-14 54.2 0.1 1.5 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF45305 - 9.2e-07 27.8 0.0 1.5e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 LisH MORN PF02493.20 ORF4363 - 2.8e-57 187.3 86.5 1.8e-07 30.6 2.9 10.2 10 0 0 10 10 10 10 MORN repeat RabGGT_insert PF07711.11 ORF4363 - 0.3 11.6 2.7 1.9e+02 2.6 0.1 4.3 2 2 3 5 5 5 0 Rab geranylgeranyl transferase alpha-subunit, insert domain Hydrolase_4 PF12146.8 ORF4175 - 1.5e-09 37.5 0.0 2.8e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF4175 - 2.8e-09 37.9 1.7 3.3e-09 37.7 1.7 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF4175 - 1e-07 31.9 0.1 1.5e-07 31.3 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF4175 - 1.6e-06 28.4 0.0 1.8e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_3 PF07859.13 ORF4175 - 0.00048 20.0 0.0 0.00058 19.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold PGAP1 PF07819.13 ORF4175 - 0.021 14.5 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein Lipase_3 PF01764.25 ORF4175 - 0.022 14.6 0.0 0.047 13.6 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) CPT_N PF16484.5 ORF4175 - 0.11 12.5 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Carnitine O-palmitoyltransferase N-terminus LIDHydrolase PF10230.9 ORF4175 - 0.24 10.9 0.0 0.28 10.7 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase NAD_binding_4 PF07993.12 ORF40005 - 4.5e-08 32.6 0.0 2.4e-06 26.9 0.0 2.4 1 1 1 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 ORF40005 - 0.00015 21.8 0.0 0.00037 20.4 0.0 1.8 2 1 0 2 2 2 1 NAD(P)H-binding Epimerase PF01370.21 ORF40005 - 0.00024 20.7 0.0 0.0003 20.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 ORF40005 - 0.027 13.6 0.0 0.043 13.0 0.0 1.3 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 ORF40005 - 0.067 12.2 0.0 0.12 11.4 0.0 1.4 1 1 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Cob_adeno_trans PF01923.18 ORF40005 - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Cobalamin adenosyltransferase FOP_dimer PF09398.10 ORF37660 - 6.3e-15 55.2 0.1 1.3e-14 54.2 0.1 1.5 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF37660 - 9.2e-07 27.8 0.0 1.5e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 LisH Mit_ribos_Mrp51 PF11709.8 ORF3614 - 0.086 12.4 0.3 0.12 11.9 0.3 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit DUF1180 PF06679.12 ORF34562 - 3.5 8.0 5.4 0.72 10.3 1.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1180) ThiF PF00899.21 ORF32719 - 1.4e-12 47.6 0.2 2e-12 47.0 0.1 1.3 1 1 0 1 1 1 1 ThiF family Epimerase_2 PF02350.19 ORF32719 - 0.18 10.6 0.0 0.24 10.2 0.0 1.1 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase PUF PF00806.19 ORF30197 - 1.5e-30 103.1 0.6 4.4e-06 26.1 0.0 5.2 5 0 0 5 5 5 5 Pumilio-family RNA binding repeat DUF1075 PF06388.11 ORF30197 - 0.11 12.5 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1075) zf-RING_2 PF13639.6 ORF29418 - 5.2e-10 39.5 7.7 9.6e-10 38.7 7.7 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF29418 - 6.9e-09 35.3 6.6 1.4e-08 34.3 6.6 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF29418 - 2e-07 30.8 7.4 4.1e-07 29.8 7.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF29418 - 1.7e-05 24.7 7.7 1.7e-05 24.7 7.7 1.6 2 0 0 2 2 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF29418 - 3.9e-05 23.6 3.9 3.9e-05 23.6 3.9 1.7 2 0 0 2 2 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF29418 - 5e-05 23.1 6.1 9.9e-05 22.1 6.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF29418 - 0.0004 20.6 7.2 0.0004 20.6 7.2 2.1 2 1 0 2 2 1 1 RING-H2 zinc finger domain Rax2 PF12768.7 ORF29418 - 0.0004 19.9 0.3 0.00088 18.8 0.2 1.6 1 1 1 2 2 2 1 Cortical protein marker for cell polarity MAP17 PF15807.5 ORF29418 - 0.00054 20.2 0.0 0.0009 19.5 0.0 1.4 1 0 0 1 1 1 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 zf-ANAPC11 PF12861.7 ORF29418 - 0.00069 19.6 1.6 0.0012 18.8 1.6 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger LRR19-TM PF15176.6 ORF29418 - 0.0015 18.5 0.0 0.003 17.5 0.0 1.5 1 0 0 1 1 1 1 Leucine-rich repeat family 19 TM domain Mucin15 PF15672.5 ORF29418 - 0.0016 18.0 2.1 0.0087 15.6 2.1 1.9 1 1 0 1 1 1 1 Cell-membrane associated Mucin15 zf-C3HC4_4 PF15227.6 ORF29418 - 0.0026 17.9 2.3 0.007 16.5 2.3 1.8 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Protocadherin PF08374.11 ORF29418 - 0.0028 17.7 0.1 0.0039 17.2 0.1 1.3 1 0 0 1 1 1 1 Protocadherin zf-C3HC4_3 PF13920.6 ORF29418 - 0.0034 17.2 7.2 0.0034 17.2 7.2 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 ORF29418 - 0.0038 17.1 5.1 0.0038 17.1 5.1 1.8 2 0 0 2 2 2 1 PHD-finger Shisa PF13908.6 ORF29418 - 0.0063 16.8 2.7 0.007 16.6 1.2 1.8 1 1 1 2 2 2 1 Wnt and FGF inhibitory regulator zf-Nse PF11789.8 ORF29418 - 0.0084 15.9 4.6 0.016 15.0 4.6 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit EphA2_TM PF14575.6 ORF29418 - 0.0088 16.9 0.1 0.018 15.9 0.1 1.5 1 0 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain LAX PF15681.5 ORF29418 - 0.022 13.6 0.0 0.035 12.9 0.0 1.4 1 0 0 1 1 1 0 Lymphocyte activation family X DUF2207 PF09972.9 ORF29418 - 0.028 13.2 0.0 0.035 12.9 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Spindle_Spc25 PF08234.12 ORF29418 - 0.044 14.0 0.6 0.14 12.4 0.1 2.1 2 0 0 2 2 1 0 Chromosome segregation protein Spc25 TMEM132D_C PF15706.5 ORF29418 - 0.045 13.5 0.2 0.21 11.4 0.0 2.2 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term zf-MIZ PF02891.20 ORF29418 - 0.053 13.3 2.6 0.12 12.2 2.6 1.6 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger DUF4446 PF14584.6 ORF29418 - 0.054 13.5 0.2 0.1 12.6 0.1 1.5 2 0 0 2 2 1 0 Protein of unknown function (DUF4446) zf-RING_6 PF14835.6 ORF29418 - 0.18 11.7 3.0 0.38 10.6 3.0 1.6 1 1 0 1 1 1 0 zf-RING of BARD1-type protein FANCL_C PF11793.8 ORF29418 - 0.19 11.9 5.8 0.55 10.5 5.8 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF29418 - 1.2 9.0 11.1 0.25 11.2 7.1 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF29418 - 1.3 8.7 12.8 0.13 12.0 7.7 2.0 2 1 0 2 2 1 0 Zinc-ribbon, C4HC2 type zf-C3H2C3 PF17122.5 ORF29418 - 9.5 6.4 7.5 77 3.4 7.5 2.3 1 1 0 1 1 1 0 Zinc-finger Atg14 PF10186.9 ORF2405 - 0.059 12.5 9.7 0.07 12.2 9.7 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Mod_r PF07200.13 ORF2405 - 0.071 13.2 21.1 0.17 12.0 20.8 1.7 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein bZIP_1 PF00170.21 ORF2405 - 0.1 12.7 13.2 0.059 13.5 5.6 2.8 1 1 2 3 3 3 0 bZIP transcription factor FRD2 PF03197.13 ORF2405 - 0.16 12.3 2.6 1 9.7 0.7 2.4 1 1 0 2 2 2 0 Bacteriophage FRD2 protein DUF4407 PF14362.6 ORF2405 - 0.17 11.2 6.7 0.2 11.0 6.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Ssl1 PF04056.14 ORF2405 - 0.52 10.1 5.3 0.83 9.4 5.3 1.3 1 0 0 1 1 1 0 Ssl1-like FapA PF03961.13 ORF2405 - 0.54 8.8 9.9 0.67 8.5 9.9 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A Exonuc_VII_L PF02601.15 ORF2405 - 1.1 8.8 9.9 1.4 8.5 9.9 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit YabA PF06156.13 ORF2405 - 2.1 9.1 20.0 1 10.1 13.1 2.3 1 1 1 2 2 2 0 Initiation control protein YabA TMPIT PF07851.13 ORF2405 - 3.3 6.9 16.7 10 5.3 16.5 1.8 1 1 0 1 1 1 0 TMPIT-like protein CENP-H PF05837.12 ORF2405 - 4.2 7.8 19.9 0.44 11.0 13.3 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) PI31_Prot_N PF11566.8 ORF20570 - 0.0023 17.8 0.1 0.0028 17.5 0.1 1.1 1 0 0 1 1 1 1 PI31 proteasome regulator N-terminal BPD_transp_1 PF00528.22 ORF18538 - 3.2e-22 79.2 16.0 3.2e-22 79.2 16.0 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Complex1_49kDa PF00346.19 ORF15808 - 2e-88 296.0 0.0 2.2e-88 295.9 0.0 1.0 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BacA PF02673.18 ORF1567 - 9.8e-74 248.3 10.8 1.1e-73 248.1 10.8 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA MNHE PF01899.16 ORF1567 - 0.54 10.0 11.7 1.2 8.9 4.1 2.8 3 1 0 3 3 3 0 Na+/H+ ion antiporter subunit HATPase_c PF02518.26 ORF14934 - 6.3e-11 42.8 0.0 8.7e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF14934 - 0.012 15.4 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aldo_ket_red PF00248.21 ORF14444 - 3.1e-42 144.8 0.0 3.9e-42 144.5 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Arm PF00514.23 ORF12866 - 4.1e-20 71.1 11.0 0.00023 21.1 0.2 5.6 5 1 0 5 5 5 4 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 ORF12866 - 2.3e-06 27.9 8.8 0.0047 17.3 2.1 3.1 1 1 2 3 3 3 3 HEAT repeats HEAT_EZ PF13513.6 ORF12866 - 3.1e-06 27.6 15.4 0.0013 19.2 0.2 4.0 2 1 0 3 3 3 2 HEAT-like repeat Atx10homo_assoc PF09759.9 ORF12866 - 0.011 15.7 0.0 0.14 12.2 0.0 2.4 2 1 1 3 3 3 0 Spinocerebellar ataxia type 10 protein domain Cnd1 PF12717.7 ORF12866 - 0.046 13.8 0.0 1.2 9.2 0.0 2.2 1 1 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 KAP PF05804.12 ORF12866 - 0.26 9.4 0.0 0.58 8.2 0.0 1.4 1 1 0 1 1 1 0 Kinesin-associated protein (KAP) HEAT PF02985.22 ORF12866 - 0.28 11.6 13.1 39 4.9 0.0 5.6 6 0 0 6 6 6 0 HEAT repeat HEAT_PBS PF03130.16 ORF12866 - 0.35 11.7 19.1 5 8.1 0.0 5.8 5 2 0 5 5 5 0 PBS lyase HEAT-like repeat MIT PF04212.18 ORF12418 - 6.8e-05 22.9 0.5 0.00016 21.6 0.5 1.6 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain Pterin_4a PF01329.19 ORF1217 - 3.9e-13 49.4 0.6 6.4e-13 48.7 0.6 1.3 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase PI31_Prot_N PF11566.8 ORF11451 - 0.0023 17.8 0.1 0.0028 17.5 0.1 1.1 1 0 0 1 1 1 1 PI31 proteasome regulator N-terminal Metallophos PF00149.28 ORF110632 - 3.1e-06 27.8 0.2 5e-06 27.2 0.2 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF110632 - 0.038 14.2 0.1 0.062 13.5 0.1 1.3 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Metallophos_C PF14008.6 ORF110632 - 0.058 14.3 0.6 0.2 12.5 0.0 2.2 3 0 0 3 3 3 0 Iron/zinc purple acid phosphatase-like protein C PAS_10 PF13596.6 ORF110632 - 0.069 13.7 0.0 0.12 13.0 0.0 1.4 1 0 0 1 1 1 0 PAS domain PAS_3 PF08447.12 ORF110506 - 0.022 15.0 0.0 0.079 13.3 0.0 1.9 3 0 0 3 3 3 0 PAS fold Fez1 PF06818.15 ORF110328 - 0.0058 17.1 16.2 0.0058 17.1 16.2 1.8 1 1 1 2 2 2 1 Fez1 ZapD PF07072.11 ORF110328 - 0.042 13.6 9.5 0.18 11.6 1.7 2.3 2 0 0 2 2 2 0 Cell division protein T2SSF PF00482.23 ORF110328 - 0.053 13.5 1.3 1.2 9.1 0.2 2.1 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein F TMEM192 PF14802.6 ORF110328 - 0.084 12.0 14.8 0.35 9.9 4.5 2.3 1 1 1 2 2 2 0 TMEM192 family GatB_Yqey PF02637.18 ORF110328 - 0.11 12.3 7.5 0.048 13.6 2.5 2.3 2 1 0 2 2 2 0 GatB domain YtxH PF12732.7 ORF110328 - 0.13 12.8 3.0 3.5 8.2 3.0 2.9 1 1 0 1 1 1 0 YtxH-like protein HALZ PF02183.18 ORF110328 - 0.68 10.2 15.7 0.39 11.0 1.4 3.7 3 0 0 3 3 3 0 Homeobox associated leucine zipper Cnn_1N PF07989.11 ORF110328 - 0.71 10.1 20.9 0.19 11.9 10.9 2.7 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 HisKA PF00512.25 ORF110328 - 1.1 9.3 3.6 1.9 8.6 0.2 2.7 2 1 1 3 3 3 0 His Kinase A (phospho-acceptor) domain DUF4407 PF14362.6 ORF110328 - 1.2 8.4 10.2 2 7.7 10.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Fib_alpha PF08702.10 ORF110328 - 1.3 9.2 21.5 0.27 11.4 2.7 2.4 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family DivIC PF04977.15 ORF110328 - 2.5 8.0 17.8 0.081 12.7 5.4 3.1 2 1 1 3 3 3 0 Septum formation initiator SlyX PF04102.12 ORF110328 - 2.6 8.7 11.4 1 10.1 1.9 3.2 3 1 1 4 4 4 0 SlyX DUF4404 PF14357.6 ORF110328 - 3.1 8.5 15.2 8 7.2 4.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) adh_short PF00106.25 ORF109838 - 2.6e-07 30.3 0.0 1.1e-06 28.3 0.0 1.9 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF109838 - 1.4e-05 24.8 0.0 5.2e-05 22.9 0.0 1.9 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks74.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks74.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks74.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks74.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Methyltrans_RNA PF04452.14 ORF10963 - 9.6e-74 247.5 0.0 1.1e-73 247.4 0.0 1.0 1 0 0 1 1 1 1 RNA methyltransferase zf-RING_7 PF02591.15 ORF10963 - 0.022 14.9 0.2 0.05 13.8 0.2 1.7 1 0 0 1 1 1 0 C4-type zinc ribbon domain CN_hydrolase PF00795.22 ORF108724 - 1.8e-12 47.2 0.0 7.8e-08 32.0 0.0 2.0 2 0 0 2 2 2 2 Carbon-nitrogen hydrolase DUF4808 PF16066.5 ORF108724 - 0.016 15.8 0.0 0.028 15.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4808) SNARE_assoc PF09335.11 ORF105523 - 0.22 12.0 4.3 0.34 11.4 0.5 2.6 2 1 0 2 2 2 0 SNARE associated Golgi protein Aldedh PF00171.22 ORF103906 - 6.8e-28 97.4 0.2 7.8e-28 97.2 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family AMP-binding PF00501.28 ORF101211 - 6.6e-25 87.6 0.0 8.6e-25 87.2 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF101211 - 9.1e-17 61.8 0.0 1.5e-16 61.1 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain LysR_substrate PF03466.20 NODE_30050_length_724_cov_2.917271_g23740_i0reverse_frame_1 - 9.7e-14 51.2 0.0 1.4e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 NODE_30050_length_724_cov_2.917271_g23740_i0reverse_frame_1 - 1.5e-11 44.1 0.0 2.9e-11 43.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Cro PF09048.10 NODE_30050_length_724_cov_2.917271_g23740_i0reverse_frame_1 - 0.0053 16.8 0.0 0.0098 15.9 0.0 1.5 1 0 0 1 1 1 1 Cro HTH_Mga PF08280.11 NODE_30050_length_724_cov_2.917271_g23740_i0reverse_frame_1 - 0.0053 16.8 0.0 0.027 14.5 0.0 2.0 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain Pkinase PF00069.25 NODE_29989_length_725_cov_114.156522_g23687_i0forward_frame_1 - 9.4e-05 21.9 0.0 0.00013 21.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain HapK PF11639.8 NODE_29989_length_725_cov_114.156522_g23687_i0forward_frame_1 - 0.13 12.7 0.0 0.28 11.7 0.0 1.5 1 0 0 1 1 1 0 REDY-like protein HapK Ank_4 PF13637.6 NODE_29930_length_726_cov_168.308249_g23633_i0reverse_frame_1 - 7.8e-05 23.2 0.1 0.00076 20.0 0.0 2.4 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_29930_length_726_cov_168.308249_g23633_i0reverse_frame_1 - 0.00045 20.8 0.0 0.0013 19.3 0.0 1.8 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_29930_length_726_cov_168.308249_g23633_i0reverse_frame_1 - 0.00061 20.0 0.0 0.018 15.5 0.0 2.8 2 0 0 2 2 2 1 Ankyrin repeat Ank_5 PF13857.6 NODE_29930_length_726_cov_168.308249_g23633_i0reverse_frame_1 - 0.0025 18.1 0.0 0.0071 16.6 0.0 1.8 1 1 0 1 1 1 1 Ankyrin repeats (many copies) VPS13_C PF16909.5 NODE_29922_length_726_cov_301.560058_g23625_i0reverse_frame_1 - 0.0004 20.2 0.8 0.00089 19.1 0.8 1.5 1 0 0 1 1 1 1 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 NODE_29922_length_726_cov_301.560058_g23625_i0reverse_frame_1 - 0.018 15.4 0.1 0.1 12.9 0.1 2.1 2 0 0 2 2 2 0 Autophagy-related protein C terminal domain Phage_holin_3_3 PF16083.5 NODE_29922_length_726_cov_301.560058_g23625_i0reverse_frame_1 - 0.061 13.4 0.5 0.11 12.7 0.5 1.3 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III Mito_carr PF00153.27 NODE_29922_length_726_cov_301.560058_g23625_i0reverse_frame_1 - 0.13 12.2 0.6 0.37 10.7 0.3 2.0 1 1 0 1 1 1 0 Mitochondrial carrier protein zf_C2H2_6 PF18450.1 NODE_29916_length_726_cov_729.505065_g19622_i2reverse_frame_1 - 0.0012 18.5 2.1 0.0027 17.4 2.1 1.6 1 0 0 1 1 1 1 Zinc Finger domain zf-RING_2 PF13639.6 NODE_29916_length_726_cov_729.505065_g19622_i2forward_frame_1 - 2.3e-05 24.6 5.2 2.3e-05 24.6 5.2 1.9 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_29916_length_726_cov_729.505065_g19622_i2forward_frame_1 - 8.9e-05 22.7 5.4 0.00026 21.2 5.4 1.9 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 NODE_29916_length_726_cov_729.505065_g19622_i2forward_frame_1 - 0.0023 17.9 2.2 0.0063 16.5 2.2 1.7 1 0 0 1 1 1 1 zinc-RING finger domain U-box PF04564.15 NODE_29916_length_726_cov_729.505065_g19622_i2forward_frame_1 - 0.011 15.9 0.2 0.036 14.2 0.1 1.9 2 1 1 3 3 3 0 U-box domain zf-C3HC4 PF00097.25 NODE_29916_length_726_cov_729.505065_g19622_i2forward_frame_1 - 0.021 14.7 5.4 0.062 13.2 5.4 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_29916_length_726_cov_729.505065_g19622_i2forward_frame_1 - 0.04 13.8 5.2 0.1 12.4 5.2 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 NODE_29916_length_726_cov_729.505065_g19622_i2forward_frame_1 - 0.21 11.4 2.8 0.52 10.2 2.8 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 NODE_29916_length_726_cov_729.505065_g19622_i2forward_frame_1 - 0.51 10.4 4.6 1.5 8.9 4.6 1.8 1 0 0 1 1 1 0 RING-type zinc-finger CNP1 PF08750.11 NODE_29905_length_727_cov_107.475434_g23610_i0reverse_frame_2 - 0.01 15.8 0.5 0.015 15.2 0.5 1.3 1 0 0 1 1 1 0 CNP1-like family His_Phos_2 PF00328.22 NODE_29878_length_728_cov_3.613276_g23587_i0forward_frame_2 - 6e-18 65.4 0.0 1.6e-17 63.9 0.0 1.6 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) DUF4293 PF14126.6 NODE_29873_length_728_cov_92.317460_g23582_i0reverse_frame_3 - 0.62 10.3 13.5 0.065 13.5 8.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4293) G-patch_2 PF12656.7 NODE_29870_length_728_cov_100.051948_g23579_i0reverse_frame_3 - 0.082 13.0 0.2 1.1 9.4 0.0 2.6 2 0 0 2 2 2 0 G-patch domain DUF4131 PF13567.6 NODE_29862_length_728_cov_193.852814_g23572_i0forward_frame_2 - 0.57 9.8 4.3 11 5.6 1.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Arf PF00025.21 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_3 - 6.1e-51 172.3 0.0 7.3e-51 172.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_3 - 1.8e-09 37.8 0.0 3.3e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_3 - 3.6e-09 36.4 0.0 4.7e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_3 - 1e-08 34.8 0.0 1.4e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_3 - 1.8e-05 24.8 0.1 2.6e-05 24.3 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_3 - 0.00015 21.0 0.4 0.0079 15.4 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_3 - 0.00022 20.7 0.0 0.00029 20.3 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_3 - 0.0093 15.5 0.2 0.14 11.7 0.2 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain ABC_tran PF00005.27 NODE_29840_length_728_cov_2760.255411_g23554_i0reverse_frame_3 - 0.17 12.4 0.0 0.59 10.6 0.0 1.8 1 1 0 1 1 1 0 ABC transporter TEBP_beta PF07404.11 NODE_29835_length_729_cov_2.425072_g23551_i0forward_frame_2 - 1.1e-17 64.5 0.8 1.6e-17 64.0 0.8 1.4 1 1 0 1 1 1 1 Telomere-binding protein beta subunit (TEBP beta) Helicase_C PF00271.31 NODE_29834_length_729_cov_2.599424_g23550_i0forward_frame_2 - 6.8e-13 48.9 0.0 9.8e-13 48.4 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain pXO2-34 PF17362.2 NODE_29823_length_729_cov_83.399135_g23539_i0reverse_frame_3 - 0.043 13.7 0.3 0.15 11.9 0.0 1.9 2 0 0 2 2 2 0 Family of unknown function GCIP PF13324.6 ORF99283 - 1e-12 48.3 3.8 1.8e-12 47.4 3.8 1.4 1 1 0 1 1 1 1 Grap2 and cyclin-D-interacting adh_short PF00106.25 ORF99138 - 2.3e-44 151.2 0.1 2.6e-44 151.0 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF99138 - 4.1e-34 118.2 0.0 6e-34 117.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF99138 - 4.7e-09 36.4 0.1 5.8e-09 36.1 0.1 1.1 1 0 0 1 1 1 1 KR domain Shikimate_DH PF01488.20 ORF99138 - 0.12 12.5 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase SMC_N PF02463.19 ORF97990 - 3.6e-30 105.0 0.7 1e-29 103.6 0.6 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF97990 - 1.7e-08 34.7 0.0 1.9e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 ORF97990 - 0.00019 21.3 0.4 0.00024 20.9 0.4 1.1 1 0 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 ORF97990 - 0.0004 20.9 0.3 0.0007 20.1 0.3 1.4 1 0 0 1 1 1 1 ABC transporter Sld5 PF05916.11 ORF97990 - 0.026 15.0 0.3 0.23 11.9 0.1 2.1 2 0 0 2 2 2 0 GINS complex protein SbcCD_C PF13558.6 ORF97990 - 0.066 13.5 0.9 0.29 11.4 0.2 2.5 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA PF00004.29 ORF97990 - 0.11 12.9 0.5 0.34 11.3 0.0 2.0 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) BLOC1_2 PF10046.9 ORF97990 - 0.13 12.6 2.6 0.35 11.2 2.0 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sigma70_r1_1 PF03979.14 ORF94536 - 0.047 13.7 0.2 0.12 12.4 0.2 1.8 1 1 0 1 1 1 0 Sigma-70 factor, region 1.1 Adenine_glyco PF03352.13 ORF93666 - 7.2e-82 273.4 0.0 8.7e-82 273.2 0.0 1.1 1 0 0 1 1 1 1 Methyladenine glycosylase RBD PF02196.15 ORF93666 - 0.073 13.2 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Raf-like Ras-binding domain Choline_transpo PF04515.12 ORF90192 - 7.8e-05 22.0 5.4 9.7e-05 21.7 5.4 1.1 1 0 0 1 1 1 1 Plasma-membrane choline transporter 14-3-3 PF00244.20 ORF9012 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF9012 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF9012 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat SAP PF02037.27 ORF89855 - 1.8e-05 24.3 0.2 4.9e-05 23.0 0.2 1.7 1 0 0 1 1 1 1 SAP domain NOA36 PF06524.12 ORF89855 - 0.027 13.8 22.2 0.049 13.0 22.2 1.4 1 0 0 1 1 1 0 NOA36 protein LETM1 PF07766.13 ORF89855 - 0.043 13.2 0.1 0.069 12.5 0.1 1.4 1 0 0 1 1 1 0 LETM1-like protein XylR_N PF06505.11 ORF89855 - 0.045 13.5 0.1 9.4 6.1 0.0 2.4 2 0 0 2 2 2 0 Activator of aromatic catabolism OST-HTH PF12872.7 ORF89855 - 0.053 13.3 0.0 0.091 12.6 0.0 1.4 1 0 0 1 1 1 0 OST-HTH/LOTUS domain DUF2457 PF10446.9 ORF89855 - 0.063 12.4 25.3 0.1 11.7 25.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF913 PF06025.12 ORF89855 - 0.17 10.8 2.6 0.26 10.2 2.6 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Zip PF02535.22 ORF89855 - 0.3 10.3 0.6 0.4 9.8 0.6 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter CENP-B_dimeris PF09026.10 ORF89855 - 0.62 10.5 29.9 1.5 9.3 29.9 1.6 1 0 0 1 1 1 0 Centromere protein B dimerisation domain Myc_N PF01056.18 ORF89855 - 0.69 9.7 13.7 1.4 8.7 13.6 1.5 1 1 0 1 1 1 0 Myc amino-terminal region DNA_pol_phi PF04931.13 ORF89855 - 0.89 7.6 28.6 0.057 11.5 23.5 1.6 2 0 0 2 2 2 0 DNA polymerase phi Cwf_Cwc_15 PF04889.12 ORF89855 - 0.91 9.2 33.2 2.3 7.9 33.2 1.7 1 1 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Dicty_REP PF05086.12 ORF89855 - 3.2 5.6 8.4 3.9 5.3 8.4 1.2 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein OAD_gamma PF04277.13 ORF89855 - 3.2 8.4 6.8 7 7.3 5.9 2.1 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain SAPS PF04499.15 ORF89855 - 4.8 5.9 11.2 5.6 5.6 11.2 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein RXT2_N PF08595.11 ORF89855 - 5.6 7.0 16.9 3.7 7.6 15.0 1.7 1 1 0 1 1 1 0 RXT2-like, N-terminal FAM75 PF14650.6 ORF88333 - 0.018 14.6 20.6 0.025 14.1 20.6 1.1 1 0 0 1 1 1 0 FAM75 family DUF2370 PF10176.9 ORF88333 - 0.091 12.4 0.5 0.17 11.5 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) DUF3671 PF12420.8 ORF88333 - 4.5 7.4 8.0 1.8 8.7 4.6 2.2 1 1 1 2 2 2 0 Protein of unknown function Glyco_hydro_25 PF01183.20 ORF86525 - 5.5e-19 69.0 5.5 6.6e-19 68.8 5.5 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 14-3-3 PF00244.20 ORF82734 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF82734 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF82734 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Transgly PF00912.22 ORF80872 - 2.4e-52 177.0 0.0 3e-52 176.7 0.0 1.1 1 0 0 1 1 1 1 Transglycosylase NLE PF08154.12 ORF80616 - 5.3e-15 55.7 0.2 1.1e-14 54.7 0.2 1.6 1 0 0 1 1 1 1 NLE (NUC135) domain RAB3GAP2_N PF14655.6 ORF80616 - 0.00055 19.3 0.1 0.00076 18.8 0.1 1.3 1 0 0 1 1 1 1 Rab3 GTPase-activating protein regulatory subunit N-terminus RusA PF05866.11 ORF80616 - 0.039 14.5 0.4 0.095 13.2 0.4 1.6 1 0 0 1 1 1 0 Endodeoxyribonuclease RusA EAF PF09816.9 ORF80616 - 0.16 12.4 1.3 0.41 11.1 0.2 2.2 2 1 0 2 2 2 0 RNA polymerase II transcription elongation factor 14-3-3 PF00244.20 ORF79158 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF79158 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF79158 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Ax_dynein_light PF10211.9 ORF78766 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF78766 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF78766 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF78766 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF78766 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF78766 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF78766 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF78766 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF78766 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF78766 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE CCM2_C PF16545.5 ORF78422 - 0.13 12.8 1.0 6.5 7.4 0.4 2.8 2 2 1 3 3 3 0 Cerebral cavernous malformation protein, harmonin-homology Taxilin PF09728.9 ORF76641 - 7.8e-06 25.3 8.4 7.8e-06 25.3 8.4 2.4 1 1 1 2 2 2 1 Myosin-like coiled-coil protein Myb_DNA-binding PF00249.31 ORF75565 - 6.9e-15 55.0 0.2 1.4e-14 54.0 0.2 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF75565 - 0.0003 20.6 1.9 0.0003 20.6 1.9 2.4 1 1 0 2 2 2 1 Myb DNA-binding like Myb_DNA-bind_6 PF13921.6 ORF75565 - 0.0011 19.2 1.8 0.0015 18.7 0.2 2.2 2 1 0 2 2 2 1 Myb-like DNA-binding domain GIT1_C PF12205.8 ORF75565 - 0.029 14.5 0.3 0.14 12.2 0.1 2.0 2 0 0 2 2 2 0 G protein-coupled receptor kinase-interacting protein 1 C term CBP_CCPA PF17040.5 ORF75565 - 0.042 14.4 0.4 0.59 10.7 0.2 2.1 1 1 1 2 2 2 0 Cellulose-complementing protein A KH_1 PF00013.29 ORF72604 - 7e-08 32.2 0.0 1.7e-07 30.9 0.0 1.7 2 0 0 2 2 2 1 KH domain KH_5 PF13184.6 ORF72604 - 0.045 13.8 0.0 0.089 12.9 0.0 1.4 1 0 0 1 1 1 0 NusA-like KH domain Ribosom_S30AE_C PF16321.5 ORF72604 - 0.048 13.4 0.1 0.094 12.4 0.1 1.4 1 0 0 1 1 1 0 Sigma 54 modulation/S30EA ribosomal protein C terminus TIG PF01833.24 ORF69972 - 1.9e-14 53.5 3.2 1.2e-09 38.1 0.0 2.8 3 0 0 3 3 3 2 IPT/TIG domain TIG_plexin PF17960.1 ORF69972 - 1.7e-07 31.2 0.0 0.021 14.8 0.0 2.3 2 0 0 2 2 2 2 TIG domain PRP1_N PF06424.12 ORF69594 - 0.012 16.0 2.0 0.02 15.3 2.0 1.3 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal Proteasome PF00227.26 ORF66550 - 1.8e-28 99.3 0.1 2.2e-28 99.0 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit PAP_assoc PF03828.19 ORF65875 - 2.7e-11 43.5 0.0 4.8e-11 42.7 0.0 1.4 1 0 0 1 1 1 1 Cid1 family poly A polymerase zf-C2H2_11 PF16622.5 ORF65875 - 0.00079 19.1 0.1 0.0013 18.4 0.1 1.4 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2_2 PF12756.7 ORF65875 - 0.022 15.1 0.0 0.038 14.3 0.0 1.3 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2HC_2 PF13913.6 ORF65875 - 0.027 14.4 0.1 0.051 13.5 0.1 1.4 1 0 0 1 1 1 0 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF65875 - 0.13 13.2 0.2 0.3 12.0 0.2 1.6 1 0 0 1 1 1 0 C2H2-type zinc finger DS PF01916.17 ORF6538 - 7.2e-50 169.9 0.0 8.4e-50 169.6 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase HAD PF12710.7 ORF6538 - 0.086 13.2 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Chloroa_b-bind PF00504.21 ORF6440 - 1.5e-21 77.6 0.0 3e-21 76.6 0.0 1.5 1 1 0 1 1 1 1 Chlorophyll A-B binding protein DUF3382 PF11862.8 ORF6440 - 0.081 13.2 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3382) PDZ PF00595.24 ORF63487 - 0.041 14.2 0.0 0.076 13.4 0.0 1.5 1 0 0 1 1 1 0 PDZ domain PDZ_6 PF17820.1 ORF63487 - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 PDZ domain OGFr_III PF04680.13 ORF63487 - 6 7.6 7.5 0.29 11.8 0.6 2.3 2 0 0 2 2 2 0 Opioid growth factor receptor repeat Exo_endo_phos PF03372.23 ORF63059 - 4.9e-06 26.2 0.0 1e-05 25.2 0.0 1.5 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF63059 - 0.18 11.6 0.1 12 5.8 0.0 2.3 2 0 0 2 2 2 0 Endonuclease-reverse transcriptase MAP17 PF15807.5 ORF6213 - 0.00097 19.4 0.1 0.0034 17.6 0.1 1.8 2 0 0 2 2 2 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF2500 PF10694.9 ORF6213 - 0.0029 18.1 1.0 0.02 15.4 0.2 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF2500) EphA2_TM PF14575.6 ORF6213 - 0.0039 18.0 0.9 3.2 8.7 0.3 2.6 2 1 0 2 2 2 2 Ephrin type-A receptor 2 transmembrane domain SieB PF14163.6 ORF6213 - 0.0055 16.2 0.9 0.0074 15.8 0.1 1.6 2 0 0 2 2 2 1 Super-infection exclusion protein B FAM176 PF14851.6 ORF6213 - 0.0086 15.7 0.1 0.16 11.6 0.1 2.1 2 0 0 2 2 2 1 FAM176 family Conotoxin PF02950.17 ORF6213 - 0.012 16.6 0.2 4.1 8.5 0.0 2.5 2 0 0 2 2 2 0 Conotoxin Comm PF15957.5 ORF6213 - 0.013 15.9 0.0 0.029 14.7 0.0 1.7 1 0 0 1 1 1 0 Commissureless CLN3 PF02487.17 ORF6213 - 0.022 13.8 0.1 0.027 13.5 0.1 1.2 1 0 0 1 1 1 0 CLN3 protein MLANA PF14991.6 ORF6213 - 0.029 14.7 1.7 0.047 14.0 0.2 2.1 1 1 1 2 2 2 0 Protein melan-A DUF5316 PF17247.2 ORF6213 - 0.034 14.1 0.0 0.034 14.1 0.0 1.7 2 0 0 2 2 1 0 Family of unknown function (DUF5316) GRP PF07172.11 ORF6213 - 0.035 14.8 0.0 14 6.4 0.0 2.4 2 0 0 2 2 2 0 Glycine rich protein family CD20 PF04103.15 ORF6213 - 0.039 14.1 1.4 0.14 12.2 0.0 2.1 1 1 0 2 2 2 0 CD20-like family RBP_receptor PF14752.6 ORF6213 - 0.04 12.5 0.3 0.058 12.0 0.3 1.2 1 0 0 1 1 1 0 Retinol binding protein receptor SID-1_RNA_chan PF13965.6 ORF6213 - 0.044 12.2 0.4 0.06 11.8 0.4 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 7TM_GPCR_Srv PF10323.9 ORF6213 - 0.044 13.1 0.1 0.12 11.7 0.0 1.7 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srv Pex24p PF06398.11 ORF6213 - 0.099 11.6 0.0 0.39 9.6 0.0 1.8 2 0 0 2 2 2 0 Integral peroxisomal membrane peroxin Ac76 PF05814.11 ORF6213 - 0.11 12.6 0.4 3.6 7.7 0.1 2.4 2 0 0 2 2 2 0 Orf76 (Ac76) FHIPEP PF00771.20 ORF6213 - 0.11 11.0 0.0 0.12 10.8 0.0 1.2 1 0 0 1 1 1 0 FHIPEP family Connexin PF00029.19 ORF6213 - 0.18 11.6 3.2 0.27 11.0 3.2 1.4 1 1 0 1 1 1 0 Connexin WBP-1 PF11669.8 ORF6213 - 1.1 9.9 6.0 11 6.7 3.1 2.9 2 1 1 3 3 2 0 WW domain-binding protein 1 DUF2681 PF10883.8 ORF6213 - 1.2 9.6 8.9 1.1 9.8 6.3 2.3 2 1 0 2 2 1 0 Protein of unknown function (DUF2681) Ferlin_C PF16165.5 ORF6213 - 2.9 7.8 7.4 0.077 12.9 0.9 1.7 2 0 0 2 2 2 0 Ferlin C-terminus SR-25 PF10500.9 ORF6213 - 5.7 6.5 18.3 13 5.3 18.3 1.5 1 1 0 1 1 1 0 Nuclear RNA-splicing-associated protein CRIM PF16978.5 ORF60212 - 0.02 15.0 0.1 0.039 14.1 0.1 1.6 1 1 0 1 1 1 0 SAPK-interacting protein 1 (Sin1), middle CRIM domain IU_nuc_hydro PF01156.19 ORF57904 - 1.2e-55 189.2 0.0 1.4e-55 189.1 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase Acyl_transf_3 PF01757.22 ORF5768 - 4.5e-10 39.1 13.0 4.5e-10 39.1 13.0 1.5 2 0 0 2 2 2 1 Acyltransferase family 14-3-3 PF00244.20 ORF56855 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF56855 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF56855 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat VCBS PF13517.6 ORF56276 - 0.13 12.8 8.1 5.1 7.8 1.0 3.1 2 1 2 4 4 4 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella Exonuc_VII_L PF02601.15 ORF54782 - 0.28 10.7 12.5 0.36 10.4 12.5 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF1664 PF07889.12 ORF54782 - 0.41 10.7 12.5 0.29 11.2 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DASH_Spc19 PF08287.11 ORF54782 - 0.51 10.2 20.2 1.3 8.9 20.1 1.8 1 1 0 1 1 1 0 Spc19 Mitofilin PF09731.9 ORF54782 - 0.58 8.9 17.2 0.83 8.4 17.2 1.2 1 0 0 1 1 1 0 Mitochondrial inner membrane protein DUF4363 PF14276.6 ORF54782 - 0.75 9.9 16.7 15 5.8 16.2 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4363) DUF4449 PF14613.6 ORF54782 - 1.7 8.8 16.2 3.2 7.8 15.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4449) DUF4407 PF14362.6 ORF54782 - 2.1 7.6 12.1 2.7 7.2 12.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FAM76 PF16046.5 ORF54782 - 2.1 7.6 16.8 2.8 7.2 16.8 1.2 1 0 0 1 1 1 0 FAM76 protein DUF3450 PF11932.8 ORF54782 - 2.6 7.3 19.4 0.096 12.0 4.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) ZapB PF06005.12 ORF54782 - 4.2 7.9 23.7 0.068 13.6 2.1 3.3 1 1 1 2 2 1 0 Cell division protein ZapB LPP PF04728.13 ORF54782 - 6.4 7.3 11.5 12 6.3 0.3 3.3 2 2 2 4 4 4 0 Lipoprotein leucine-zipper Fungal_TACC PF12709.7 ORF54782 - 6.9 7.2 26.3 0.14 12.6 1.8 3.4 1 1 2 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins Ax_dynein_light PF10211.9 ORF53949 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF53949 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF53949 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF53949 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF53949 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF53949 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF53949 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF53949 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF53949 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF53949 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE Glyco_hydro_25 PF01183.20 ORF5362 - 6.8e-26 91.5 5.5 8e-26 91.3 5.5 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Dev_Cell_Death PF10539.9 ORF5362 - 0.016 15.1 0.3 0.025 14.4 0.2 1.4 1 1 0 1 1 1 0 Development and cell death domain PI3K_P85_iSH2 PF16454.5 ORF53149 - 0.0041 16.7 0.7 0.0088 15.6 0.6 1.6 1 1 0 1 1 1 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain CorA PF01544.18 ORF53149 - 0.082 12.2 7.3 0.12 11.6 7.3 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein CENP-H PF05837.12 ORF53149 - 0.085 13.3 2.0 2.5 8.6 0.6 2.4 2 1 0 2 2 2 0 Centromere protein H (CENP-H) AAA_25 PF13481.6 ORF53149 - 0.19 11.3 0.1 0.39 10.3 0.1 1.4 1 1 0 1 1 1 0 AAA domain Laminin_II PF06009.12 ORF53149 - 0.26 11.3 8.0 3.4 7.7 2.0 2.5 2 1 1 3 3 3 0 Laminin Domain II Glyco_hydro_25 PF01183.20 ORF52437 - 6.8e-26 91.5 5.5 8e-26 91.3 5.5 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Dev_Cell_Death PF10539.9 ORF52437 - 0.016 15.1 0.3 0.025 14.4 0.2 1.4 1 1 0 1 1 1 0 Development and cell death domain RRM_1 PF00076.22 ORF52287 - 4.6e-17 61.6 0.0 4.6e-17 61.6 0.0 1.6 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF52287 - 7e-05 22.9 0.1 0.00012 22.1 0.1 1.5 1 1 0 1 1 1 1 RNA recognition motif EF-hand_6 PF13405.6 ORF51855 - 1.2e-07 31.1 0.7 0.011 15.6 0.0 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF51855 - 6.9e-07 28.4 0.1 0.0078 15.7 0.0 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF51855 - 9.4e-06 26.0 0.0 2.3e-05 24.8 0.0 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF51855 - 3.6e-05 23.1 1.6 0.017 14.6 0.1 3.4 4 0 0 4 4 4 2 EF hand Ion_trans PF00520.31 ORF51855 - 0.014 14.6 4.5 0.021 14.1 4.5 1.2 1 0 0 1 1 1 0 Ion transport protein EF-hand_8 PF13833.6 ORF51855 - 0.053 13.4 0.1 6.8 6.6 0.1 2.5 2 0 0 2 2 2 0 EF-hand domain pair SieB PF14163.6 ORF51750 - 0.00062 19.3 1.0 0.00082 18.9 0.2 1.6 2 0 0 2 2 2 1 Super-infection exclusion protein B MAP17 PF15807.5 ORF51750 - 0.0045 17.2 0.0 0.015 15.5 0.1 1.8 2 0 0 2 2 2 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 EphA2_TM PF14575.6 ORF51750 - 0.0084 17.0 1.7 4.6 8.2 0.5 2.6 2 1 0 2 2 2 2 Ephrin type-A receptor 2 transmembrane domain DUF2500 PF10694.9 ORF51750 - 0.018 15.6 1.0 0.13 12.8 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2500) FAM176 PF14851.6 ORF51750 - 0.026 14.2 0.1 0.5 10.0 0.1 2.1 2 0 0 2 2 2 0 FAM176 family CD20 PF04103.15 ORF51750 - 0.029 14.5 1.6 0.085 12.9 0.0 2.1 1 1 0 2 2 2 0 CD20-like family Conotoxin PF02950.17 ORF51750 - 0.029 15.4 0.1 3.3 8.8 0.0 2.4 2 0 0 2 2 2 0 Conotoxin Comm PF15957.5 ORF51750 - 0.029 14.7 0.1 0.071 13.5 0.1 1.7 1 1 0 1 1 1 0 Commissureless TssO PF17561.2 ORF51750 - 0.04 14.0 0.7 0.077 13.1 0.7 1.4 1 0 0 1 1 1 0 Type VI secretion system, TssO CLN3 PF02487.17 ORF51750 - 0.047 12.7 0.0 0.058 12.4 0.0 1.2 1 0 0 1 1 1 0 CLN3 protein TAS2R PF05296.13 ORF51750 - 0.049 12.7 0.0 0.069 12.3 0.0 1.1 1 0 0 1 1 1 0 Taste receptor protein (TAS2R) LapA_dom PF06305.11 ORF51750 - 3.8 7.4 6.9 1.8 8.4 3.4 2.4 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain 14-3-3 PF00244.20 ORF49659 - 4.2e-80 268.4 2.8 4.8e-80 268.2 2.8 1.0 1 0 0 1 1 1 1 14-3-3 protein DUF1878 PF08963.10 ORF48394 - 0.082 13.4 0.4 0.3 11.6 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1878) KduI PF04962.12 ORF46010 - 1.8e-41 142.2 0.3 2e-41 142.0 0.3 1.0 1 0 0 1 1 1 1 KduI/IolB family Cupin_2 PF07883.11 ORF46010 - 0.12 12.1 1.0 1.8 8.4 0.1 2.8 3 0 0 3 3 3 0 Cupin domain 14-3-3 PF00244.20 ORF43814 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF43814 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF43814 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Acetyltransf_13 PF13880.6 ORF43607 - 7.7e-13 48.2 0.0 1.7e-12 47.1 0.0 1.7 1 0 0 1 1 1 1 ESCO1/2 acetyl-transferase Tissue_fac PF01108.17 ORF43328 - 0.23 11.3 0.4 0.43 10.5 0.4 1.5 1 0 0 1 1 1 0 Tissue factor Peptidase_C2 PF00648.21 ORF42269 - 3.3e-26 92.0 1.9 5.9e-26 91.2 1.9 1.4 1 1 0 1 1 1 1 Calpain family cysteine protease RPW8 PF05659.11 ORF37176 - 0.036 13.7 1.8 0.063 13.0 1.8 1.3 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 CbiQ PF02361.16 ORF36084 - 0.0012 18.5 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Cobalt transport protein ThrE_2 PF12821.7 ORF35513 - 0.018 15.2 2.5 0.044 13.9 2.5 1.7 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE DUF998 PF06197.13 ORF35513 - 0.034 13.7 10.5 0.053 13.1 10.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF998) TctB PF07331.11 ORF35513 - 0.13 12.5 6.2 0.62 10.3 6.3 1.9 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Transposase_31 PF04754.12 ORF35268 - 3.9e-85 284.6 0.0 4.6e-85 284.4 0.0 1.0 1 0 0 1 1 1 1 Putative transposase, YhgA-like EF-hand_6 PF13405.6 ORF30192 - 2.1e-15 55.3 0.1 6.5e-05 22.6 0.1 4.1 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF30192 - 9.4e-14 51.6 0.1 1.3e-06 28.8 0.0 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF30192 - 3.5e-13 48.1 0.1 8.3e-05 21.9 0.0 4.1 5 0 0 5 5 5 3 EF hand EF-hand_5 PF13202.6 ORF30192 - 2.1e-07 30.1 0.0 0.00055 19.3 0.1 3.6 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF30192 - 4e-06 26.6 0.0 0.32 10.9 0.0 3.5 2 1 1 3 3 3 3 EF-hand domain pair Dockerin_1 PF00404.18 ORF30192 - 0.00015 21.8 0.3 0.01 16.0 0.1 2.7 2 1 1 3 3 3 1 Dockerin type I domain NifZ PF04319.13 ORF30192 - 0.031 14.0 0.0 0.41 10.5 0.0 2.2 2 0 0 2 2 2 0 NifZ domain Adenine_glyco PF03352.13 ORF30192 - 0.037 13.8 0.1 0.28 10.9 0.2 2.3 2 1 0 2 2 2 0 Methyladenine glycosylase PIP49_C PF12260.8 ORF30192 - 0.042 13.5 0.0 6.7 6.3 0.0 2.4 2 0 0 2 2 2 0 Protein-kinase domain of FAM69 Ax_dynein_light PF10211.9 ORF27641 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF27641 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF27641 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF27641 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF27641 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF27641 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF27641 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF27641 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF27641 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF27641 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE 14-3-3 PF00244.20 ORF24580 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF24580 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF24580 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF1659 PF07872.11 ORF23837 - 0.16 11.6 0.4 11 5.7 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1659) GDP_Man_Dehyd PF16363.5 ORF23323 - 9.8e-32 110.6 0.0 7.9e-31 107.7 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF23323 - 2.2e-25 89.5 0.0 2.8e-25 89.2 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DUF2278 PF10042.9 ORF23323 - 0.098 12.7 0.1 0.23 11.5 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2278) RecO_C PF02565.15 ORF23300 - 1.2e-23 83.7 0.1 3.5e-23 82.1 0.1 1.7 1 1 0 1 1 1 1 Recombination protein O C terminal RecO_N PF11967.8 ORF23300 - 7.8e-23 80.3 0.0 1.3e-22 79.5 0.0 1.4 1 0 0 1 1 1 1 Recombination protein O N terminal Cpn60_TCP1 PF00118.24 ORF23249 - 1e-61 209.1 0.1 1.1e-61 208.9 0.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Ribosomal_L11 PF00298.19 ORF23249 - 0.29 11.7 2.4 17 6.0 0.2 2.3 1 1 1 2 2 2 0 Ribosomal protein L11, RNA binding domain Acyl_transf_3 PF01757.22 ORF22687 - 4.5e-10 39.1 13.0 4.5e-10 39.1 13.0 1.5 2 0 0 2 2 2 1 Acyltransferase family Ax_dynein_light PF10211.9 ORF21542 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF21542 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF21542 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF21542 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF21542 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF21542 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF21542 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF21542 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF21542 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF21542 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE CM_2 PF01817.21 ORF21427 - 0.044 14.1 0.2 0.095 13.1 0.2 1.6 1 0 0 1 1 1 0 Chorismate mutase type II LRR_4 PF12799.7 ORF2017 - 3.7e-19 68.5 15.7 5e-06 26.8 0.7 4.9 5 1 0 5 5 5 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF2017 - 2.8e-16 59.0 12.2 1.5e-05 24.6 0.6 4.8 2 1 4 6 6 6 6 Leucine rich repeat LRR_9 PF14580.6 ORF2017 - 1.2e-13 50.9 7.6 7.5e-08 32.1 0.5 2.2 1 1 0 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 ORF2017 - 5.9e-07 29.0 6.8 0.96 9.7 0.0 6.1 7 0 0 7 7 7 3 Leucine Rich repeat LRR_1 PF00560.33 ORF2017 - 0.0002 21.5 8.0 5.7 7.9 0.1 5.6 6 1 0 6 6 6 2 Leucine Rich Repeat DUF733 PF05306.11 ORF16149 - 0.066 13.5 2.3 1.1 9.6 2.0 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF733) Thioesterase PF00975.20 ORF15910 - 1.2e-51 176.1 0.0 1.4e-51 175.8 0.0 1.0 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_6 PF12697.7 ORF15910 - 0.00026 21.7 0.3 0.00033 21.3 0.3 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF15910 - 0.0056 16.3 0.0 0.0073 16.0 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Lipase_3 PF01764.25 ORF15910 - 0.0094 15.8 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_3 PF07859.13 ORF15910 - 0.023 14.6 0.0 0.027 14.3 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF15910 - 0.024 13.9 0.0 0.033 13.5 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Acetyltransf_13 PF13880.6 ORF112321 - 7.7e-13 48.2 0.0 1.7e-12 47.1 0.0 1.7 1 0 0 1 1 1 1 ESCO1/2 acetyl-transferase Glyco_hydro_25 PF01183.20 ORF11196 - 2.7e-27 96.1 4.8 3.1e-27 95.9 4.8 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Dev_Cell_Death PF10539.9 ORF11196 - 0.015 15.2 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 Development and cell death domain OspE PF02471.17 ORF11196 - 0.39 10.9 3.5 1.5 9.1 0.4 2.2 1 1 1 2 2 2 0 Borrelia outer surface protein E Ribosomal_S3Ae PF01015.18 ORF11169 - 4.9e-71 238.5 3.0 5.9e-71 238.2 3.0 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family ANTH PF07651.16 ORF108796 - 1.9e-07 30.4 2.8 1.9e-07 30.4 2.8 1.5 2 0 0 2 2 2 1 ANTH domain Vps51 PF08700.11 ORF108796 - 0.00056 19.9 7.7 0.066 13.3 0.3 3.1 3 1 0 3 3 3 2 Vps51/Vps67 DUF5070 PF16802.5 ORF108796 - 0.036 14.1 1.0 1.2 9.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5070) SET PF00856.28 ORF108073 - 0.015 15.7 0.0 0.027 14.9 0.0 1.4 1 0 0 1 1 1 0 SET domain Glyco_hydro_25 PF01183.20 ORF106838 - 6.8e-26 91.5 5.5 8e-26 91.3 5.5 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Dev_Cell_Death PF10539.9 ORF106838 - 0.016 15.1 0.3 0.025 14.4 0.2 1.4 1 1 0 1 1 1 0 Development and cell death domain Sas6_CC PF18594.1 ORF102636 - 0.06 13.1 2.9 1.8 8.4 0.1 2.5 2 0 0 2 2 2 0 Sas6/XLF/XRCC4 coiled-coil domain MCU PF04678.13 ORF102636 - 0.5 10.4 3.5 0.91 9.6 3.3 1.4 1 1 0 1 1 1 0 Mitochondrial calcium uniporter Ax_dynein_light PF10211.9 ORF10123 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF10123 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF10123 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF10123 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF10123 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF10123 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF10123 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF10123 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF10123 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF10123 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE O-FucT PF10250.9 ORF100835 - 0.037 13.7 0.0 0.041 13.6 0.0 1.2 1 0 0 1 1 1 0 GDP-fucose protein O-fucosyltransferase Beta-lactamase2 PF13354.6 ORF100835 - 0.19 11.3 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase enzyme family Ank_2 PF12796.7 ORF100602 - 2.2e-36 124.3 16.3 4.4e-13 49.6 1.0 4.0 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF100602 - 4.2e-22 78.2 7.5 4.3e-05 24.0 0.1 5.0 5 1 1 6 6 6 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF100602 - 1.5e-21 75.8 12.3 1.3e-05 25.4 0.2 5.6 6 0 0 6 6 6 5 Ankyrin repeat Ank_3 PF13606.6 ORF100602 - 5.7e-19 66.2 7.3 0.0036 17.7 0.2 5.7 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF100602 - 1e-17 63.9 10.8 1.7e-06 28.2 0.4 5.5 3 1 3 6 6 6 5 Ankyrin repeats (many copies) Aminotran_3 PF00202.21 ORF100548 - 1e-70 238.4 0.2 1.3e-70 238.2 0.2 1.0 1 0 0 1 1 1 1 Aminotransferase class-III SH3_12 PF18129.1 ORF100548 - 0.11 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 Xrn1 SH3-like domain SieB PF14163.6 NODE_30182_length_721_cov_47.444606_g23847_i0forward_frame_1 - 0.03 13.8 2.5 0.054 13.0 2.5 1.4 1 0 0 1 1 1 0 Super-infection exclusion protein B DUF3949 PF13133.6 NODE_30168_length_721_cov_141.218659_g2426_i2reverse_frame_1 - 0.014 15.8 0.2 0.034 14.6 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3949) Nudc_N PF14050.6 NODE_30142_length_722_cov_2.349345_g23818_i0reverse_frame_1 - 0.084 12.9 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. ATG16 PF08614.11 NODE_30141_length_722_cov_3.088792_g23817_i0reverse_frame_1 - 0.018 15.3 0.3 0.024 14.8 0.3 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Pkinase PF00069.25 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 4.1e-63 213.2 0.5 5e-63 212.9 0.5 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 5.1e-31 107.9 0.1 6.2e-31 107.6 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 6.4e-06 25.7 0.1 0.0055 16.1 0.0 2.1 2 0 0 2 2 2 2 Kinase-like Pkinase_fungal PF17667.1 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.00057 18.8 0.0 0.0013 17.6 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase Haspin_kinase PF12330.8 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.0028 16.6 0.2 0.0049 15.9 0.2 1.4 1 1 0 1 1 1 1 Haspin like kinase domain FTA2 PF13095.6 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.0059 16.2 0.7 0.55 9.8 0.0 2.1 1 1 1 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.036 14.0 0.0 0.13 12.1 0.0 1.7 1 1 1 2 2 2 0 Phosphotransferase enzyme family TBK1_ULD PF18396.1 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.046 13.6 0.0 0.57 10.1 0.0 2.1 2 0 0 2 2 2 0 TANK binding kinase 1 ubiquitin-like domain Kdo PF06293.14 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.055 12.8 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Lipocalin PF00061.23 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.082 13.1 1.7 0.46 10.7 0.4 2.1 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family ABC1 PF03109.16 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.13 12.4 0.1 0.29 11.3 0.1 1.5 1 1 0 1 1 1 0 ABC1 family KIP1 PF07765.12 NODE_30080_length_723_cov_89.178779_g23763_i0reverse_frame_1 - 0.042 14.0 2.2 0.07 13.3 0.3 2.3 2 0 0 2 2 2 0 KIP1-like protein Cyclin_N PF00134.23 NODE_30075_length_723_cov_125.343023_g17920_i1reverse_frame_1 - 0.00018 21.2 0.4 0.00036 20.3 0.4 1.4 1 1 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 NODE_30075_length_723_cov_125.343023_g17920_i1reverse_frame_1 - 0.00025 21.5 0.6 0.00032 21.1 0.6 1.2 1 0 0 1 1 1 1 Cyclin NAD-GH PF10712.9 NODE_30051_length_724_cov_2.750363_g23741_i0reverse_frame_3 - 1e-07 30.8 0.4 1.7e-07 30.1 0.2 1.4 2 0 0 2 2 2 1 NAD-specific glutamate dehydrogenase HSP70 PF00012.20 NODE_30051_length_724_cov_2.750363_g23741_i0forward_frame_3 - 2.7e-28 98.6 0.0 3.3e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein NLE PF08154.12 NODE_30049_length_724_cov_3.133527_g23739_i0reverse_frame_3 - 0.1 13.1 0.0 0.3 11.6 0.0 1.7 2 0 0 2 2 2 0 NLE (NUC135) domain DiS_P_DiS PF06750.13 NODE_30049_length_724_cov_3.133527_g23739_i0reverse_frame_2 - 0.0023 18.0 3.4 0.0045 17.1 0.2 2.3 1 1 1 2 2 2 1 Bacterial Peptidase A24 N-terminal domain PsbT PF01405.17 NODE_30015_length_724_cov_364.587808_g23706_i0reverse_frame_2 - 0.24 11.3 7.1 2.6 7.9 0.9 3.1 2 0 0 2 2 2 0 Photosystem II reaction centre T protein Homeobox_KN PF05920.11 NODE_30015_length_724_cov_364.587808_g23706_i0forward_frame_2 - 2e-11 43.6 1.5 5.7e-11 42.1 1.5 1.8 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_30015_length_724_cov_364.587808_g23706_i0forward_frame_2 - 1.2e-08 34.7 1.6 2e-08 34.0 0.5 1.9 2 0 0 2 2 2 1 Homeodomain HTH_Tnp_4 PF13613.6 NODE_30015_length_724_cov_364.587808_g23706_i0forward_frame_2 - 0.098 12.4 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease Phage_terminase PF10668.9 NODE_30015_length_724_cov_364.587808_g23706_i0forward_frame_2 - 0.12 12.4 0.2 0.12 12.4 0.2 2.0 2 0 0 2 2 2 0 Phage terminase small subunit Phage_CI_repr PF07022.13 NODE_30015_length_724_cov_364.587808_g23706_i0forward_frame_2 - 0.17 12.0 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Big_9 PF17963.1 NODE_30004_length_725_cov_2.517391_g23700_i0reverse_frame_2 - 0.27 12.0 15.8 0.39 11.5 2.9 3.0 3 0 0 3 3 3 0 Bacterial Ig domain CHCH PF06747.13 NODE_30003_length_725_cov_2.643478_g23699_i0reverse_frame_2 - 3.3 8.0 7.4 5.5 7.3 3.3 3.2 4 1 0 4 4 4 0 CHCH domain Pkinase PF00069.25 NODE_30003_length_725_cov_2.643478_g23699_i0forward_frame_2 - 9.3e-37 126.8 0.8 5e-27 94.9 0.5 2.0 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_30003_length_725_cov_2.643478_g23699_i0forward_frame_2 - 1.7e-21 76.7 0.2 5.5e-16 58.6 0.1 2.5 1 1 0 2 2 2 2 Protein tyrosine kinase Kdo PF06293.14 NODE_30003_length_725_cov_2.643478_g23699_i0forward_frame_2 - 0.00033 20.1 0.5 0.00048 19.5 0.5 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 NODE_30003_length_725_cov_2.643478_g23699_i0forward_frame_2 - 0.001 17.9 0.4 0.0013 17.6 0.4 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 NODE_30003_length_725_cov_2.643478_g23699_i0forward_frame_2 - 0.0047 16.9 0.1 0.0067 16.4 0.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 NODE_30003_length_725_cov_2.643478_g23699_i0forward_frame_2 - 0.012 14.6 0.2 0.017 14.1 0.2 1.2 1 0 0 1 1 1 0 Haspin like kinase domain PIP49_C PF12260.8 NODE_30003_length_725_cov_2.643478_g23699_i0forward_frame_2 - 0.03 13.9 0.6 0.2 11.3 0.1 2.0 2 0 0 2 2 2 0 Protein-kinase domain of FAM69 FTA2 PF13095.6 NODE_30003_length_725_cov_2.643478_g23699_i0forward_frame_2 - 0.04 13.5 0.1 0.086 12.4 0.1 1.6 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUSP PF06337.12 NODE_30001_length_725_cov_12.240580_g20693_i1forward_frame_2 - 3.7e-09 37.1 0.6 9.6e-09 35.8 0.1 1.9 2 0 0 2 2 2 1 DUSP domain Homeobox_KN PF05920.11 NODE_29959_length_726_cov_3.251809_g23662_i0reverse_frame_3 - 4.7e-14 52.0 0.3 1.1e-13 50.8 0.3 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_29959_length_726_cov_3.251809_g23662_i0reverse_frame_3 - 5.2e-07 29.4 1.0 1.4e-06 28.1 0.1 2.0 2 0 0 2 2 2 1 Homeodomain Trigger_N PF05697.13 NODE_29955_length_726_cov_4.222865_g23658_i0reverse_frame_3 - 2e-41 141.6 0.4 2.4e-41 141.4 0.4 1.1 1 0 0 1 1 1 1 Bacterial trigger factor protein (TF) DUF2935 PF11155.8 NODE_29944_length_726_cov_98.820550_g23647_i0reverse_frame_3 - 0.15 12.4 7.1 1.4 9.2 7.1 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) PSD4 PF07631.11 NODE_29944_length_726_cov_98.820550_g23647_i0reverse_frame_3 - 0.25 11.9 5.6 3.5 8.2 0.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF1592) DUF1053 PF06327.14 NODE_29944_length_726_cov_98.820550_g23647_i0reverse_frame_3 - 3.4 8.3 11.0 0.91 10.1 0.3 2.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) Cnd1_N PF12922.7 NODE_29944_length_726_cov_98.820550_g23647_i0forward_frame_2 - 0.042 13.7 0.4 0.089 12.6 0.4 1.5 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term Ribosomal_S10 PF00338.22 NODE_29935_length_726_cov_116.030391_g23638_i0reverse_frame_2 - 0.00038 20.6 0.1 0.048 13.9 0.1 2.6 2 0 0 2 2 2 2 Ribosomal protein S10p/S20e CDKN3 PF05706.12 NODE_29935_length_726_cov_116.030391_g23638_i0forward_frame_2 - 0.072 12.8 0.1 0.12 12.1 0.1 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Fib_alpha PF08702.10 NODE_29916_length_726_cov_729.505065_g19622_i2forward_frame_2 - 5 7.3 12.8 1 9.5 7.8 2.1 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF1116 PF06545.11 ORF9764 - 1.7e-51 174.8 0.9 2.4e-51 174.3 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1116) TPR_12 PF13424.6 ORF96874 - 8.1e-21 74.1 14.0 3.2e-14 53.0 0.6 3.1 2 1 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF96874 - 3.4e-14 52.0 0.8 0.0046 16.7 0.0 3.8 4 0 0 4 4 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF96874 - 3.9e-13 48.5 0.8 0.024 14.8 0.1 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF96874 - 4.4e-12 45.1 7.1 0.011 15.8 0.0 4.6 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF96874 - 6.2e-12 45.9 7.5 6e-05 23.5 1.0 3.9 2 2 2 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF96874 - 2.5e-09 37.2 10.6 0.33 11.9 0.0 5.2 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF96874 - 1.1e-08 34.5 2.3 0.13 12.3 0.0 4.0 4 0 0 4 4 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF96874 - 1e-07 32.5 10.1 0.0076 16.9 0.3 4.5 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF96874 - 2.5e-07 30.4 13.4 2.5e-06 27.1 12.8 2.0 1 1 0 1 1 1 1 MalT-like TPR region TPR_11 PF13414.6 ORF96874 - 3.8e-06 26.5 1.0 2.1 8.1 0.0 5.3 4 1 1 5 5 5 1 TPR repeat TPR_10 PF13374.6 ORF96874 - 7.5e-06 25.7 12.1 0.09 12.7 0.2 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF96874 - 5.7e-05 23.3 2.2 0.92 9.8 0.7 3.6 2 2 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 ORF96874 - 6.8e-05 23.2 2.7 0.36 11.6 0.0 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF96874 - 0.00018 21.6 7.7 0.021 14.9 1.3 3.8 2 2 2 4 4 4 1 Tetratricopeptide repeat TPR_20 PF14561.6 ORF96874 - 0.00022 21.5 10.5 0.22 11.9 1.5 4.4 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF96874 - 0.0009 19.7 10.4 3.4 8.6 0.0 5.2 5 0 0 5 5 4 2 Tetratricopeptide repeat SRP_TPR_like PF17004.5 ORF96874 - 0.0012 18.9 0.0 1 9.4 0.1 2.7 2 1 1 3 3 3 1 Putative TPR-like repeat RPN7 PF10602.9 ORF96874 - 0.0021 17.8 1.5 1.1 8.9 0.5 3.0 2 1 0 2 2 2 1 26S proteasome subunit RPN7 HrpB1_HrpK PF09613.10 ORF96874 - 0.013 15.1 0.2 0.16 11.6 0.0 2.5 2 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) TPR_17 PF13431.6 ORF96874 - 0.02 15.2 0.0 23 5.6 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat PPR PF01535.20 ORF96874 - 0.034 14.4 0.1 9 6.8 0.0 3.5 3 0 0 3 3 3 0 PPR repeat Wzy_C_2 PF11846.8 ORF96874 - 0.035 14.0 0.1 3.8 7.4 0.1 2.6 1 1 1 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal TPR_15 PF13429.6 ORF96874 - 0.037 13.2 6.3 3.4 6.8 0.0 3.1 1 1 2 3 3 3 0 Tetratricopeptide repeat DUF1664 PF07889.12 ORF96874 - 0.084 12.9 0.2 0.22 11.6 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) HemY_N PF07219.13 ORF96874 - 0.36 11.0 3.2 0.47 10.7 0.2 2.6 3 1 1 4 4 4 0 HemY protein N-terminus Mem_trans PF03547.18 ORF95192 - 6.3e-15 54.5 0.3 7.7e-15 54.2 0.3 1.1 1 0 0 1 1 1 1 Membrane transport protein Ser_hydrolase PF06821.13 ORF91035 - 0.033 14.0 0.3 0.12 12.2 0.1 1.9 1 1 1 2 2 2 0 Serine hydrolase SH3_9 PF14604.6 ORF9093 - 1.6e-08 34.2 0.1 2.8e-08 33.5 0.1 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF9093 - 1.1e-07 31.3 0.8 1.9e-07 30.6 0.8 1.4 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 ORF9093 - 3.3e-05 23.5 0.4 7.1e-05 22.4 0.1 1.7 2 0 0 2 2 2 1 Variant SH3 domain MEA1 PF06910.11 ORF88922 - 9.9e-09 35.9 25.4 4.6e-06 27.3 25.4 2.8 1 1 0 1 1 1 1 Male enhanced antigen 1 (MEA1) His_Phos_1 PF00300.22 ORF88674 - 1.5e-36 125.9 0.0 1.9e-36 125.6 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Glyco_hydro_2_C PF02836.17 ORF87220 - 3.1e-07 29.8 0.0 3.9e-07 29.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain C1_2 PF03107.16 ORF85657 - 4.6e-05 23.7 11.2 0.00015 22.0 8.2 2.3 2 0 0 2 2 2 1 C1 domain C1_1 PF00130.22 ORF85657 - 0.0013 18.5 7.9 0.042 13.7 4.9 2.3 2 0 0 2 2 2 2 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RING_4 PF14570.6 ORF85657 - 0.0072 16.1 4.7 0.0072 16.1 4.7 2.2 1 1 1 2 2 2 1 RING/Ubox like zinc-binding domain ZZ PF00569.17 ORF85657 - 0.12 12.2 5.0 0.27 11.1 5.0 1.6 1 0 0 1 1 1 0 Zinc finger, ZZ type FYVE PF01363.21 ORF85657 - 0.16 12.1 6.0 0.29 11.3 6.0 1.5 1 0 0 1 1 1 0 FYVE zinc finger PHD PF00628.29 ORF85657 - 1.4 8.9 11.2 6.9 6.6 11.2 2.1 1 1 0 1 1 1 0 PHD-finger IBR PF01485.21 ORF85657 - 2.8 8.2 10.3 9.5 6.5 10.3 1.9 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain Phage_TAC_3 PF06896.11 ORF81505 - 0.051 14.2 0.5 0.47 11.0 0.1 2.3 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC KIAA1328 PF15369.6 ORF81505 - 1.1 9.1 14.0 13 5.5 14.0 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 PGA2 PF07543.12 ORF81258 - 0.12 12.4 1.8 2 8.4 0.2 2.1 1 1 1 2 2 2 0 Protein trafficking PGA2 ABC_tran PF00005.27 ORF81020 - 2.7e-28 99.2 0.1 4.5e-28 98.5 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF81020 - 3e-08 33.4 5.8 1.1e-06 28.3 1.0 2.8 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF81020 - 0.0001 22.2 0.3 0.21 11.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF81020 - 0.031 14.4 0.0 0.065 13.3 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase DUF87 PF01935.17 ORF81020 - 0.041 14.0 0.2 0.084 13.0 0.2 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_29 PF13555.6 ORF81020 - 0.068 12.9 0.1 0.16 11.7 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AA_kinase PF00696.28 ORF80265 - 1.5e-32 113.1 0.2 1.7e-32 112.9 0.2 1.1 1 0 0 1 1 1 1 Amino acid kinase family ADH_zinc_N PF00107.26 ORF78410 - 2.3e-21 76.1 0.0 3.6e-21 75.5 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF78410 - 6e-15 56.5 0.0 1.4e-14 55.2 0.0 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase LRR_4 PF12799.7 ORF78328 - 5.8e-07 29.7 2.4 0.00035 20.9 0.2 3.2 2 1 1 3 3 3 2 Leucine Rich repeats (2 copies) SIR2 PF02146.17 ORF7787 - 1.7e-29 103.0 0.0 2.3e-29 102.6 0.0 1.1 1 0 0 1 1 1 1 Sir2 family NinF PF05810.12 ORF7787 - 0.15 11.9 0.0 0.31 11.0 0.0 1.5 1 0 0 1 1 1 0 NinF protein DZR PF12773.7 ORF7787 - 0.22 11.6 2.7 0.53 10.3 2.1 2.0 2 1 1 3 3 3 0 Double zinc ribbon zf-C2HC_2 PF13913.6 ORF7787 - 3.5 7.6 5.8 5.4 7.0 1.2 2.6 2 0 0 2 2 2 0 zinc-finger of a C2HC-type LRR_4 PF12799.7 ORF7753 - 2.4e-26 91.3 38.0 1.3e-06 28.6 0.0 5.7 1 1 7 8 8 8 8 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF7753 - 1.1e-19 70.6 12.1 3.2e-10 39.8 0.9 3.0 1 1 2 3 3 3 3 Leucine-rich repeat LRR_8 PF13855.6 ORF7753 - 1.8e-13 50.1 12.3 4.4e-05 23.1 0.4 4.8 2 2 1 4 4 4 4 Leucine rich repeat LRR_6 PF13516.6 ORF7753 - 0.009 16.0 9.0 0.17 12.0 0.0 4.8 5 0 0 5 5 5 1 Leucine Rich repeat LRR_1 PF00560.33 ORF7753 - 1 10.1 6.5 1.4e+02 3.7 0.0 5.1 5 2 0 5 5 5 0 Leucine Rich Repeat RasGAP_C PF03836.15 ORF77267 - 0.00042 20.5 0.3 0.00067 19.8 0.3 1.2 1 0 0 1 1 1 1 RasGAP C-terminus HTH_Tnp_IS630 PF01710.16 ORF77267 - 0.057 13.5 0.4 0.13 12.3 0.0 1.7 2 0 0 2 2 2 0 Transposase Herpes_UL25 PF01499.16 ORF77267 - 0.07 11.6 1.6 0.086 11.4 1.6 1.2 1 0 0 1 1 1 0 Herpesvirus UL25 family Hrs_helical PF12210.8 ORF77267 - 0.26 11.9 5.5 0.23 12.0 3.5 1.9 2 0 0 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate U1snRNP70_N PF12220.8 ORF76068 - 0.42 11.3 3.5 1.2 9.8 0.8 2.5 2 1 1 3 3 3 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal GCR1_C PF12550.8 ORF76068 - 3.6 8.0 8.4 0.98 9.8 3.9 2.5 2 1 0 2 2 2 0 Transcriptional activator of glycolytic enzymes dCMP_cyt_deam_2 PF08211.12 ORF75920 - 0.093 12.9 2.9 0.58 10.4 0.4 2.2 2 0 0 2 2 2 0 Cytidine and deoxycytidylate deaminase zinc-binding region Phage_TAC_3 PF06896.11 ORF73810 - 0.036 14.7 0.4 0.29 11.8 0.1 2.2 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC U1snRNP70_N PF12220.8 ORF73810 - 0.34 11.6 4.5 0.74 10.5 0.8 2.6 2 1 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Phage_TAC_3 PF06896.11 ORF73301 - 0.041 14.5 0.1 0.29 11.8 0.1 2.1 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC U1snRNP70_N PF12220.8 ORF73301 - 0.52 11.0 4.5 0.74 10.5 0.8 2.5 2 1 1 3 3 3 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal FapA PF03961.13 ORF72718 - 0.1 11.2 4.9 0.11 11.0 4.9 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4252 PF14060.6 ORF72718 - 0.19 11.6 0.1 0.19 11.6 0.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4252) SLC12 PF03522.15 ORF7226 - 2e-21 76.6 0.8 2.4e-17 63.1 0.0 2.1 1 1 1 2 2 2 2 Solute carrier family 12 SHMT PF00464.19 ORF72109 - 4.4e-72 242.9 0.1 5.4e-72 242.6 0.1 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 ORF72109 - 0.044 13.1 0.0 0.051 12.8 0.0 1.1 1 0 0 1 1 1 0 Beta-eliminating lyase Phage_TAC_3 PF06896.11 ORF70973 - 0.041 14.5 0.2 0.29 11.8 0.1 2.2 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC U1snRNP70_N PF12220.8 ORF70973 - 0.54 10.9 4.4 0.74 10.5 0.8 2.5 2 1 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Sec20 PF03908.13 ORF70973 - 4.6 7.2 7.2 3.4 7.6 1.0 3.0 2 1 1 3 3 3 0 Sec20 ABC_tran PF00005.27 ORF70174 - 5e-34 117.8 0.0 7.8e-34 117.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 ORF70174 - 1.1e-07 31.6 0.0 2.1e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 ORF70174 - 0.00038 20.4 2.0 0.13 12.0 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 ORF70174 - 0.0096 15.0 0.0 0.014 14.5 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein SMC_N PF02463.19 ORF70174 - 0.011 15.2 0.1 3.5 7.0 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF70174 - 0.032 14.4 0.3 0.66 10.3 0.3 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 ORF70174 - 0.057 13.9 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain Hist_deacetyl PF00850.19 ORF69476 - 5.9e-54 183.6 0.2 7.6e-54 183.3 0.2 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Phage_TAC_3 PF06896.11 ORF68830 - 0.051 14.2 0.5 0.47 11.0 0.1 2.3 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC KIAA1328 PF15369.6 ORF68830 - 1.1 9.1 14.0 13 5.5 14.0 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 DUF3867 PF12983.7 ORF67619 - 0.00039 20.5 0.1 0.0011 19.0 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3867) DUF3221 PF11518.8 ORF67619 - 0.037 14.4 2.5 0.17 12.2 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3221) TPMT PF05724.11 ORF66879 - 4.6e-14 52.6 0.0 6.1e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) SPOC PF07744.13 ORF66879 - 0.022 14.7 0.0 0.029 14.3 0.0 1.3 1 1 0 1 1 1 0 SPOC domain Methyltransf_25 PF13649.6 ORF66879 - 0.13 13.0 0.0 0.25 12.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Toxin-deaminase PF14424.6 ORF62875 - 0.00059 19.9 0.0 0.0012 19.0 0.0 1.4 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases SNAD4 PF18750.1 ORF62875 - 0.0025 17.9 0.0 0.004 17.3 0.0 1.4 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 NAD1 PF18778.1 ORF62875 - 0.005 17.0 0.0 0.0074 16.4 0.0 1.2 1 0 0 1 1 1 1 Novel AID APOBEC clade 1 APOBEC2 PF18772.1 ORF62875 - 0.02 15.0 0.0 0.031 14.3 0.0 1.2 1 0 0 1 1 1 0 APOBEC2 APOBEC_N PF08210.11 ORF62875 - 0.044 13.7 0.0 0.061 13.2 0.0 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain MafB19-deam PF14437.6 ORF62875 - 0.092 12.5 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 MafB19-like deaminase APOBEC3 PF18771.1 ORF62875 - 0.1 12.8 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 APOBEC3 dCMP_cyt_deam_1 PF00383.23 ORF62875 - 0.2 11.6 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region UQ_con PF00179.26 ORF61478 - 1.1e-15 57.5 0.0 1.8e-15 56.8 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_E PF14462.6 ORF61478 - 0.11 12.3 0.0 0.24 11.2 0.0 1.6 1 1 0 1 1 1 0 Prokaryotic E2 family E p450 PF00067.22 ORF61328 - 1.1e-07 31.0 0.0 1.9e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Cytochrome P450 MEA1 PF06910.11 ORF59762 - 9.9e-09 35.9 25.4 4.6e-06 27.3 25.4 2.8 1 1 0 1 1 1 1 Male enhanced antigen 1 (MEA1) AA_kinase PF00696.28 ORF59524 - 3.6e-28 98.8 0.3 4.3e-28 98.5 0.3 1.1 1 0 0 1 1 1 1 Amino acid kinase family TPH PF13868.6 ORF57982 - 0.027 13.0 85.1 0.8 8.1 85.1 2.6 1 1 0 1 1 1 0 Trichohyalin-plectin-homology domain TPR_19 PF14559.6 ORF55304 - 0.0032 18.0 0.0 0.0083 16.6 0.1 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat MIP PF00230.20 ORF54204 - 8.1e-15 55.1 1.3 2.3e-14 53.6 1.3 1.7 1 1 0 1 1 1 1 Major intrinsic protein 7TM-7TMR_HD PF07698.11 ORF54204 - 0.017 14.9 1.2 0.017 14.9 1.2 2.3 1 1 1 2 2 2 0 7TM receptor with intracellular HD hydrolase Homeodomain PF00046.29 ORF53321 - 1.4e-05 24.9 3.8 3.2e-05 23.7 3.8 1.6 1 0 0 1 1 1 1 Homeodomain TraF PF13728.6 ORF53321 - 0.081 12.7 6.2 0.61 9.9 2.0 2.2 2 0 0 2 2 2 0 F plasmid transfer operon protein Neur_chan_memb PF02932.16 ORF53321 - 3.3 7.7 5.2 5 7.1 5.2 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Methyltransf_12 PF08242.12 ORF51793 - 0.00019 22.1 0.3 0.00068 20.3 0.1 2.0 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF51793 - 0.001 19.7 0.1 0.0039 17.9 0.1 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF51793 - 0.0019 18.8 0.0 0.004 17.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 ORF51793 - 0.0053 16.2 0.0 0.017 14.6 0.0 1.7 1 1 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_23 PF13489.6 ORF51793 - 0.0087 15.9 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CheR PF01739.18 ORF51793 - 0.16 11.5 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 CheR methyltransferase, SAM binding domain Ank_2 PF12796.7 ORF51030 - 4.5e-34 116.9 2.8 1.9e-15 57.2 0.2 3.1 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF51030 - 1.3e-27 95.8 8.2 4.4e-08 33.5 0.0 4.6 3 1 2 5 5 5 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF51030 - 2.2e-20 72.4 8.7 2.4e-06 27.7 0.3 6.8 1 1 6 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF51030 - 1.5e-18 64.9 2.6 0.0023 18.3 0.0 6.6 7 0 0 7 7 7 5 Ankyrin repeat Ank PF00023.30 ORF51030 - 4.4e-18 64.8 10.6 0.00015 22.0 0.1 6.5 7 0 0 7 7 7 4 Ankyrin repeat TPR_9 PF13371.6 ORF51030 - 0.068 13.3 0.9 3.1 8.0 0.2 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat FapA PF03961.13 ORF50937 - 0.1 11.2 4.9 0.11 11.0 4.9 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4252 PF14060.6 ORF50937 - 0.19 11.6 0.1 0.19 11.6 0.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4252) SLC12 PF03522.15 ORF487 - 2e-21 76.6 0.8 2.4e-17 63.1 0.0 2.1 1 1 1 2 2 2 2 Solute carrier family 12 ABC_tran PF00005.27 ORF4848 - 1.2e-28 100.3 0.1 2.1e-28 99.5 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF4848 - 3.7e-08 33.1 5.6 6e-06 25.8 5.6 2.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF4848 - 8.5e-05 22.5 0.3 0.21 11.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF87 PF01935.17 ORF4848 - 0.03 14.4 0.0 0.046 13.8 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain MMR_HSR1 PF01926.23 ORF4848 - 0.031 14.3 0.0 0.066 13.3 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF4848 - 0.069 12.9 0.1 0.16 11.7 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain Phage_TAC_3 PF06896.11 ORF47955 - 0.051 14.2 0.5 0.47 11.0 0.1 2.3 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC KIAA1328 PF15369.6 ORF47955 - 1.1 9.1 14.0 13 5.5 14.0 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 Phage_TAC_3 PF06896.11 ORF47792 - 0.051 14.2 0.5 0.47 11.0 0.1 2.3 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC KIAA1328 PF15369.6 ORF47792 - 1.1 9.1 14.0 13 5.5 14.0 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 SLC12 PF03522.15 ORF46568 - 2e-21 76.6 0.8 2.4e-17 63.1 0.0 2.1 1 1 1 2 2 2 2 Solute carrier family 12 Metallophos PF00149.28 ORF4614 - 1.9e-36 126.5 0.1 2.2e-36 126.3 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF4614 - 9.3e-21 74.0 1.6 1.7e-20 73.2 1.6 1.5 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain adh_short_C2 PF13561.6 ORF41569 - 6.1e-51 173.2 0.0 1e-50 172.5 0.0 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF41569 - 4.7e-47 160.0 0.0 5.5e-47 159.8 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF41569 - 5.5e-09 36.2 0.0 7.3e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF41569 - 0.002 17.7 0.1 0.004 16.7 0.1 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 ORF41569 - 0.023 15.3 0.0 0.049 14.2 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Polysacc_synt_2 PF02719.15 ORF41569 - 0.023 13.8 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Cdh1_DBD_1 PF18196.1 ORF37050 - 0.052 13.9 1.3 0.1 12.9 0.3 2.0 2 0 0 2 2 2 0 Chromodomain helicase DNA-binding domain 1 PGA2 PF07543.12 ORF3632 - 0.12 12.4 1.8 2 8.4 0.2 2.1 1 1 1 2 2 2 0 Protein trafficking PGA2 CRAL_TRIO PF00650.20 ORF35144 - 6e-20 71.6 1.1 1.2e-19 70.6 1.1 1.5 1 0 0 1 1 1 1 CRAL/TRIO domain Peptidase_C97 PF05903.14 ORF35144 - 0.036 13.9 0.0 0.063 13.1 0.0 1.5 1 1 0 1 1 1 0 PPPDE putative peptidase domain Thioredoxin_3 PF13192.6 ORF35144 - 0.047 13.7 0.4 3.6 7.7 0.0 2.4 2 0 0 2 2 2 0 Thioredoxin domain CRAL_TRIO_2 PF13716.6 ORF35144 - 0.068 13.3 0.4 0.16 12.2 0.2 1.7 2 0 0 2 2 2 0 Divergent CRAL/TRIO domain Topoisom_bac PF01131.20 ORF3495 - 2e-21 76.5 0.0 4.9e-16 58.7 0.0 2.0 2 0 0 2 2 2 2 DNA topoisomerase CN_hydrolase PF00795.22 ORF33126 - 2.9e-30 105.5 0.1 3.4e-30 105.3 0.1 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase ANAPC3 PF12895.7 ORF32742 - 5.9e-09 36.0 0.2 5.4e-05 23.3 0.0 3.3 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF32742 - 4.5e-06 27.0 3.4 3.4 8.7 0.2 4.8 3 1 2 5 5 5 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF32742 - 9.7e-06 26.1 2.1 0.074 13.7 0.1 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF32742 - 0.0001 22.1 0.3 0.044 13.9 0.0 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF32742 - 0.0016 18.2 0.8 0.11 12.3 0.0 3.8 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF32742 - 0.0033 17.5 0.2 6.5 7.2 0.0 3.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF32742 - 0.066 13.5 5.7 5.8 7.3 0.4 4.6 3 2 2 5 5 5 0 Tetratricopeptide repeat PABP PF00658.18 ORF32742 - 0.071 13.3 0.1 0.15 12.2 0.1 1.5 1 0 0 1 1 1 0 Poly-adenylate binding protein, unique domain TPR_4 PF07721.14 ORF32742 - 0.12 13.0 4.1 10 7.1 0.1 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks75.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks75.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks75.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks75.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SPOC PF07744.13 ORF3183 - 0.021 14.8 0.1 0.04 13.8 0.1 1.3 1 1 0 1 1 1 0 SPOC domain T3SSipB PF16535.5 ORF3183 - 0.032 14.7 0.5 0.074 13.5 0.5 1.6 1 0 0 1 1 1 0 Type III cell invasion protein SipB Glu_dehyd_C PF16912.5 ORF3183 - 0.15 11.5 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus Use1 PF09753.9 ORF27288 - 0.064 13.0 0.7 0.39 10.4 0.8 1.9 1 1 0 1 1 1 0 Membrane fusion protein Use1 Mem_trans PF03547.18 ORF26107 - 0.15 10.4 7.5 0.056 11.8 3.6 2.0 2 0 0 2 2 2 0 Membrane transport protein DUF1980 PF09323.10 ORF26107 - 8.6 6.2 8.1 1.2e+02 2.5 7.9 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) Phage_TAC_3 PF06896.11 ORF25798 - 0.031 14.9 0.3 0.29 11.8 0.1 2.2 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC U1snRNP70_N PF12220.8 ORF25798 - 0.31 11.7 3.4 0.74 10.5 0.8 2.4 2 1 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal U1snRNP70_N PF12220.8 ORF25442 - 0.39 11.4 3.4 0.74 10.5 0.8 2.4 2 1 1 3 3 3 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Sulphotransf PF09037.10 ORF2544 - 0.041 13.4 0.2 0.096 12.2 0.1 1.6 1 1 0 2 2 2 0 Stf0 sulphotransferase Ig_mannosidase PF17753.1 ORF2544 - 0.066 13.0 0.0 0.36 10.6 0.0 2.1 2 0 0 2 2 2 0 Ig-fold domain Biopterin_H PF00351.21 ORF25154 - 3.8e-32 111.6 0.7 5.2e-32 111.2 0.7 1.2 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase ERp29 PF07749.12 ORF2436 - 0.07 14.0 1.0 0.28 12.1 0.2 2.4 2 1 1 3 3 3 0 Endoplasmic reticulum protein ERp29, C-terminal domain DUF4632 PF15451.6 ORF2436 - 0.24 11.5 1.5 0.39 10.8 0.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4632) KRTAP PF11759.8 ORF24096 - 3.2 8.4 10.8 1.1 9.8 3.3 2.3 2 0 0 2 2 2 0 Keratin-associated matrix SF3A2 PF16835.5 ORF22358 - 6.7e-38 129.0 0.5 1e-37 128.4 0.5 1.3 1 0 0 1 1 1 1 Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) zf-met PF12874.7 ORF22358 - 1.8e-07 31.3 1.7 4.3e-07 30.1 1.7 1.7 1 0 0 1 1 1 1 Zinc-finger of C2H2 type CactinC_cactus PF09732.9 ORF22358 - 0.00063 19.7 0.9 0.00095 19.1 0.9 1.3 1 0 0 1 1 1 1 Cactus-binding C-terminus of cactin protein Methyltransf_9 PF08003.11 ORF21388 - 1.1e-147 491.0 0.1 1.3e-147 490.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_23 PF13489.6 ORF21388 - 9.1e-10 38.6 0.0 1.4e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF21388 - 6.2e-08 32.6 0.0 7.8e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF21388 - 9.5e-07 29.4 0.0 1.7e-06 28.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF21388 - 8.3e-06 26.4 0.0 1.6e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF21388 - 5e-05 22.7 0.0 5.9e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_12 PF08242.12 ORF21388 - 9.8e-05 23.0 0.0 0.00015 22.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF21388 - 0.055 13.2 0.0 0.088 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Mem_trans PF03547.18 ORF21119 - 0.15 10.4 7.5 0.056 11.8 3.6 2.0 2 0 0 2 2 2 0 Membrane transport protein DUF1980 PF09323.10 ORF21119 - 8.6 6.2 8.1 1.2e+02 2.5 7.9 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) MIP PF00230.20 ORF20904 - 7.4e-15 55.3 1.2 2.2e-14 53.7 1.2 1.7 1 1 0 1 1 1 1 Major intrinsic protein Abhydrolase_3 PF07859.13 ORF20586 - 3e-05 24.0 0.0 4.6e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold MSP1a PF11670.8 ORF19498 - 0.00098 18.5 0.5 0.0015 17.9 0.5 1.2 1 0 0 1 1 1 1 Major surface protein 1a (MSP1a) Prok-RING_1 PF14446.6 ORF19498 - 0.0086 16.0 5.0 0.0086 16.0 5.0 2.3 3 0 0 3 3 3 1 Prokaryotic RING finger family 1 PHD PF00628.29 ORF19498 - 0.079 12.9 9.3 0.17 11.8 5.9 2.4 2 0 0 2 2 2 0 PHD-finger RINGv PF12906.7 ORF19498 - 0.73 10.0 13.2 2.5 8.3 11.9 2.2 1 1 1 2 2 2 0 RING-variant domain PHD_4 PF16866.5 ORF19498 - 2.3 8.4 10.5 1.2 9.3 5.1 2.7 2 1 0 2 2 2 0 PHD-finger Yip1 PF04893.17 ORF18730 - 4.9e-08 32.9 1.0 5.6e-08 32.7 1.0 1.1 1 0 0 1 1 1 1 Yip1 domain YIF1 PF03878.15 ORF18730 - 0.013 15.1 11.0 0.75 9.3 11.0 2.1 1 1 0 1 1 1 0 YIF1 RasGAP_C PF03836.15 ORF16838 - 0.00042 20.5 0.3 0.00067 19.8 0.3 1.2 1 0 0 1 1 1 1 RasGAP C-terminus HTH_Tnp_IS630 PF01710.16 ORF16838 - 0.057 13.5 0.4 0.13 12.3 0.0 1.7 2 0 0 2 2 2 0 Transposase Herpes_UL25 PF01499.16 ORF16838 - 0.07 11.6 1.6 0.086 11.4 1.6 1.2 1 0 0 1 1 1 0 Herpesvirus UL25 family Hrs_helical PF12210.8 ORF16838 - 0.26 11.9 5.5 0.23 12.0 3.5 1.9 2 0 0 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate ATPgrasp_YheCD PF14398.6 ORF16214 - 0.13 11.5 0.1 0.13 11.5 0.1 2.1 1 1 1 2 2 2 0 YheC/D like ATP-grasp ACPS PF01648.20 ORF13850 - 5.6e-13 49.0 0.0 1.1e-12 48.0 0.0 1.6 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily Phage_TAC_3 PF06896.11 ORF12501 - 0.058 14.0 0.8 0.81 10.3 0.1 2.3 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC NAD1 PF18778.1 ORF112481 - 4.3e-05 23.7 0.0 6.6e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Novel AID APOBEC clade 1 Toxin-deaminase PF14424.6 ORF112481 - 0.00012 22.2 0.1 0.00021 21.4 0.1 1.3 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases SNAD4 PF18750.1 ORF112481 - 0.00013 22.0 0.0 0.00021 21.4 0.0 1.3 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 dCMP_cyt_deam_1 PF00383.23 ORF112481 - 0.00015 21.6 0.0 0.00023 21.0 0.0 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region APOBEC2 PF18772.1 ORF112481 - 0.00053 20.1 0.0 0.00084 19.4 0.0 1.3 1 0 0 1 1 1 1 APOBEC2 NAD2 PF18782.1 ORF112481 - 0.0042 17.2 0.0 0.0065 16.6 0.0 1.3 1 0 0 1 1 1 1 Novel AID APOBEC clade 2 APOBEC3 PF18771.1 ORF112481 - 0.0062 16.7 0.0 0.012 15.8 0.0 1.4 1 0 0 1 1 1 1 APOBEC3 APOBEC4 PF18775.1 ORF112481 - 0.013 15.6 0.1 0.022 14.9 0.1 1.4 1 0 0 1 1 1 0 APOBEC4 APOBEC1 PF18769.1 ORF112481 - 0.079 13.2 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 APOBEC1 Ribosomal_S2 PF00318.20 ORF107804 - 1.3e-93 312.1 0.0 1.5e-93 312.0 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S2 DMA PF03474.14 ORF107140 - 0.001 18.6 0.0 0.0019 17.8 0.0 1.4 1 0 0 1 1 1 1 DMRTA motif NADPH_Ox PF08414.10 ORF107140 - 0.005 17.2 1.1 0.011 16.1 1.1 1.6 1 0 0 1 1 1 1 Respiratory burst NADPH oxidase DUF4618 PF15397.6 ORF107140 - 0.0055 16.2 6.6 0.0055 16.2 6.6 2.1 2 1 1 3 3 3 1 Domain of unknown function (DUF4618) CUE PF02845.16 ORF107140 - 0.029 14.1 0.2 0.33 10.7 0.0 2.3 2 0 0 2 2 2 0 CUE domain TSC22 PF01166.18 ORF107140 - 0.11 12.8 2.9 4 7.8 2.3 2.7 1 1 1 2 2 2 0 TSC-22/dip/bun family APG6_N PF17675.1 ORF107140 - 0.89 10.1 17.0 0.042 14.4 6.5 2.4 2 1 1 3 3 3 0 Apg6 coiled-coil region YabA PF06156.13 ORF107140 - 1.1 9.9 10.2 0.3 11.8 4.0 2.6 1 1 2 3 3 3 0 Initiation control protein YabA Med9 PF07544.13 ORF107140 - 5.4 7.2 11.7 0.46 10.6 6.1 2.2 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Thia_YuaJ PF09515.10 ORF104986 - 0.07 13.1 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Thiamine transporter protein (Thia_YuaJ) YpM PF09144.10 ORF104986 - 0.095 12.9 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Yersinia pseudo-tuberculosis mitogen Homeodomain PF00046.29 ORF103718 - 1.4e-05 24.9 3.8 3.2e-05 23.7 3.8 1.6 1 0 0 1 1 1 1 Homeodomain TraF PF13728.6 ORF103718 - 0.081 12.7 6.2 0.61 9.9 2.0 2.2 2 0 0 2 2 2 0 F plasmid transfer operon protein Neur_chan_memb PF02932.16 ORF103718 - 3.3 7.7 5.2 5 7.1 5.2 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Pro_isomerase PF00160.21 ORF102120 - 2.3e-46 157.9 0.0 3.2e-46 157.5 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Phage_TAC_3 PF06896.11 ORF100086 - 0.051 14.2 0.5 0.47 11.0 0.1 2.3 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC KIAA1328 PF15369.6 ORF100086 - 1.1 9.1 14.0 13 5.5 14.0 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 PPR_2 PF13041.6 NODE_30282_length_718_cov_110.629575_g23926_i0forward_frame_1 - 5e-20 71.4 0.0 4.7e-05 23.5 0.0 4.4 2 2 2 4 4 4 4 PPR repeat family PPR_3 PF13812.6 NODE_30282_length_718_cov_110.629575_g23926_i0forward_frame_1 - 8e-16 57.9 0.0 1.2e-07 31.7 0.0 3.9 3 1 1 4 4 4 4 Pentatricopeptide repeat domain PPR PF01535.20 NODE_30282_length_718_cov_110.629575_g23926_i0forward_frame_1 - 3.1e-08 33.3 2.1 0.24 11.7 0.0 5.3 6 0 0 6 6 6 2 PPR repeat PPR_long PF17177.4 NODE_30282_length_718_cov_110.629575_g23926_i0forward_frame_1 - 2.2e-05 23.9 3.9 0.0015 18.0 1.6 2.1 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 NODE_30282_length_718_cov_110.629575_g23926_i0forward_frame_1 - 7e-05 22.4 7.3 8.9 6.1 0.4 5.9 6 1 0 6 6 6 3 PPR repeat TPR_7 PF13176.6 NODE_30282_length_718_cov_110.629575_g23926_i0forward_frame_1 - 0.0064 16.4 5.5 0.027 14.5 0.1 4.1 6 0 0 6 6 6 1 Tetratricopeptide repeat PYRIN PF02758.16 NODE_30282_length_718_cov_110.629575_g23926_i0forward_frame_1 - 0.0091 16.1 2.0 23 5.2 0.0 4.1 4 0 0 4 4 4 1 PAAD/DAPIN/Pyrin domain RNA_POL_M_15KD PF02150.16 NODE_30275_length_718_cov_177.711567_g20720_i2reverse_frame_1 - 0.27 11.1 5.3 0.28 11.1 0.4 2.5 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Lectin_C_term PF18022.1 NODE_30275_length_718_cov_177.711567_g20720_i2forward_frame_1 - 0.022 15.2 2.8 0.073 13.5 2.8 1.8 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin C-terminal domain DUF1143 PF06608.11 NODE_30275_length_718_cov_177.711567_g20720_i2forward_frame_1 - 0.022 14.8 0.3 0.041 13.9 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) HNH_4 PF13395.6 NODE_30259_length_718_cov_10471.799414_g21013_i6forward_frame_1 - 0.3 11.0 4.2 0.56 10.2 4.2 1.5 1 0 0 1 1 1 0 HNH endonuclease SR-25 PF10500.9 NODE_30259_length_718_cov_10471.799414_g21013_i6forward_frame_1 - 0.81 9.2 11.1 1.7 8.2 11.1 1.4 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CRT-like PF08627.10 NODE_30258_length_718_cov_10471.821376_g21013_i5reverse_frame_1 - 0.5 9.2 3.2 0.79 8.6 3.2 1.2 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like Abhydro_lipase PF04083.16 NODE_30240_length_719_cov_245.714912_g23893_i0forward_frame_1 - 3e-17 61.9 0.0 5e-17 61.2 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_30240_length_719_cov_245.714912_g23893_i0forward_frame_1 - 0.00021 21.0 0.1 0.00027 20.7 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_30240_length_719_cov_245.714912_g23893_i0forward_frame_1 - 0.17 11.2 0.0 0.22 10.8 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF4186 PF13811.6 NODE_30223_length_720_cov_2.956204_g23880_i0reverse_frame_1 - 0.021 14.9 0.2 0.036 14.1 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) HMG_box PF00505.19 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 1.3e-20 73.6 5.9 1.3e-20 73.6 5.9 2.7 3 0 0 3 3 3 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 1.7e-10 41.4 4.5 1.7e-10 41.4 4.5 3.1 3 1 0 3 3 3 1 HMG-box domain CHDNT PF08073.12 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 9.1e-05 22.3 0.2 0.00022 21.1 0.2 1.6 1 0 0 1 1 1 1 CHDNT (NUC034) domain DUF3699 PF12480.8 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 0.041 14.0 0.0 0.08 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3699) AT_hook PF02178.19 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 0.09 12.7 0.5 0.09 12.7 0.5 4.8 3 0 0 3 3 3 0 AT hook motif DUF3159 PF11361.8 NODE_30186_length_721_cov_4.084548_g23851_i0forward_frame_2 - 0.019 14.7 0.4 0.028 14.2 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3159) Pox_F11 PF04943.12 NODE_30182_length_721_cov_47.444606_g23847_i0forward_frame_3 - 0.1 11.6 0.2 0.14 11.2 0.2 1.1 1 0 0 1 1 1 0 Poxvirus F11 protein Basic PF01586.16 NODE_30182_length_721_cov_47.444606_g23847_i0forward_frame_3 - 0.49 11.6 7.2 0.93 10.7 7.2 1.4 1 0 0 1 1 1 0 Myogenic Basic domain DUF720 PF05302.11 NODE_30181_length_721_cov_54.966472_g23846_i0reverse_frame_2 - 0.41 10.5 4.6 0.24 11.2 2.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF720) DUF2201_N PF13203.6 NODE_30168_length_721_cov_141.218659_g2426_i2reverse_frame_3 - 0.35 10.4 2.8 0.36 10.4 1.7 1.4 1 1 0 1 1 1 0 Putative metallopeptidase domain Neural_ProG_Cyt PF06567.11 NODE_30168_length_721_cov_141.218659_g2426_i2reverse_frame_3 - 0.39 11.0 10.8 0.03 14.5 5.1 2.0 2 1 1 3 3 3 0 Neural chondroitin sulphate proteoglycan cytoplasmic domain Hpt PF01627.23 NODE_30142_length_722_cov_2.349345_g23818_i0forward_frame_2 - 3.2e-06 27.3 0.0 5.9e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Hpt domain Ax_dynein_light PF10211.9 NODE_30142_length_722_cov_2.349345_g23818_i0forward_frame_2 - 1.2 9.1 7.6 0.2 11.6 4.0 1.5 2 0 0 2 2 2 0 Axonemal dynein light chain Clat_adaptor_s PF01217.20 NODE_30141_length_722_cov_3.088792_g23817_i0reverse_frame_3 - 0.043 13.8 2.6 2.4 8.1 0.9 2.5 2 0 0 2 2 2 0 Clathrin adaptor complex small chain LRR_adjacent PF08191.11 NODE_30119_length_722_cov_103.873362_g23796_i0forward_frame_3 - 0.18 12.1 1.8 0.71 10.1 0.1 2.6 3 0 0 3 3 3 0 LRR adjacent Chlam_PMP PF02415.17 NODE_30118_length_722_cov_113.160116_g23795_i0reverse_frame_3 - 5.7e-05 23.3 20.3 0.024 15.1 0.3 4.2 4 0 0 4 4 4 3 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Asp PF00026.23 NODE_30101_length_722_cov_413.030568_g23780_i0reverse_frame_2 - 1.5e-29 103.4 1.3 1.9e-29 103.1 1.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_30101_length_722_cov_413.030568_g23780_i0reverse_frame_2 - 2.5e-05 24.6 0.3 0.00014 22.1 0.1 2.0 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal HNOBA PF07701.14 NODE_30091_length_723_cov_3.303779_g23774_i0reverse_frame_2 - 0.083 12.3 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 Heme NO binding associated Presenilin PF01080.17 NODE_30091_length_723_cov_3.303779_g23774_i0reverse_frame_2 - 6.6 5.4 4.5 7.5 5.2 4.5 1.1 1 0 0 1 1 1 0 Presenilin DUF3541 PF12060.8 NODE_30069_length_723_cov_257.860465_g23755_i0reverse_frame_3 - 0.0014 18.4 1.6 0.002 17.9 1.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3541) DUF3072 PF11272.8 NODE_30069_length_723_cov_257.860465_g23755_i0reverse_frame_3 - 0.0017 18.2 0.8 0.0017 18.2 0.8 3.0 3 0 0 3 3 3 1 Protein of unknown function (DUF3072) Tau95_N PF17682.1 NODE_30069_length_723_cov_257.860465_g23755_i0reverse_frame_3 - 0.18 12.0 0.0 0.18 12.0 0.0 1.5 2 0 0 2 2 2 0 Tau95 Triple barrel domain Striatin PF08232.12 NODE_30069_length_723_cov_257.860465_g23755_i0reverse_frame_3 - 0.54 10.8 12.2 0.77 10.3 12.2 1.6 1 1 0 1 1 1 0 Striatin family FUSC PF04632.12 NODE_30069_length_723_cov_257.860465_g23755_i0reverse_frame_3 - 0.61 8.6 16.6 0.83 8.1 16.6 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family GrpE PF01025.19 NODE_30069_length_723_cov_257.860465_g23755_i0reverse_frame_3 - 0.68 9.6 7.8 1.2 8.7 7.8 1.4 1 0 0 1 1 1 0 GrpE DUF4506 PF14958.6 NODE_30063_length_723_cov_397.261628_g23750_i0forward_frame_3 - 0.006 16.1 0.6 0.017 14.6 0.5 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4506) Dynein_light PF01221.18 NODE_30057_length_723_cov_1569.122093_g23745_i0reverse_frame_3 - 8.8e-17 61.2 0.9 1.6e-16 60.3 0.9 1.4 1 0 0 1 1 1 1 Dynein light chain type 1 Carb_anhydrase PF00194.21 ORF99931 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase WD40 PF00400.32 ORF99431 - 8.8e-08 32.7 11.3 0.033 15.1 0.2 4.4 4 0 0 4 4 4 4 WD domain, G-beta repeat zf-C2H2 PF00096.26 ORF99295 - 7.1e-11 41.9 9.7 0.012 16.0 0.6 3.5 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF99295 - 5.9e-09 36.0 10.7 0.035 14.9 0.1 3.6 3 0 0 3 3 3 3 C2H2-type zinc finger zf-Di19 PF05605.12 ORF99295 - 3.8e-08 33.5 8.9 1.2e-06 28.7 0.8 2.3 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-H2C2_2 PF13465.6 ORF99295 - 4e-08 33.3 12.4 0.0024 18.2 0.4 4.0 4 0 0 4 4 4 2 Zinc-finger double domain TerY_C PF15616.6 ORF99295 - 0.0085 16.2 0.1 0.014 15.5 0.1 1.4 1 0 0 1 1 1 1 TerY-C metal binding domain zf-C2H2_9 PF16293.5 ORF99295 - 0.0085 15.9 0.2 5 7.1 0.0 3.1 1 1 2 3 3 3 1 C2H2 type zinc-finger (1 copy) Zn_Tnp_IS1595 PF12760.7 ORF99295 - 0.02 14.8 4.6 0.02 14.8 4.6 2.4 3 0 0 3 3 2 0 Transposase zinc-ribbon domain zf-met PF12874.7 ORF99295 - 0.02 15.3 0.9 27 5.3 0.0 3.4 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF99295 - 0.025 14.9 4.8 5.6 7.4 4.8 3.1 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) FYVE PF01363.21 ORF99295 - 0.026 14.6 1.3 0.026 14.6 1.3 2.1 2 0 0 2 2 2 0 FYVE zinc finger zf-C2H2_jaz PF12171.8 ORF99295 - 0.028 14.7 0.4 19 5.7 0.0 3.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf_UBZ PF18439.1 ORF99295 - 0.043 13.4 8.1 2.1 8.0 0.4 3.5 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger TRAF6_Z2 PF18048.1 ORF99295 - 0.079 13.1 0.6 3.1 8.0 0.2 2.7 2 0 0 2 2 2 0 TNF receptor-associated factor 6 zinc finger 2 HNH_5 PF14279.6 ORF99295 - 0.091 12.6 0.8 1.6 8.7 0.1 2.6 1 1 1 2 2 2 0 HNH endonuclease zinc_ribbon_4 PF13717.6 ORF99295 - 0.11 12.5 6.7 1.5 8.8 1.8 3.1 2 1 0 2 2 2 0 zinc-ribbon domain YacG PF03884.14 ORF99295 - 0.12 12.1 0.4 21 4.9 0.1 2.7 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG zf-LITAF-like PF10601.9 ORF99295 - 0.13 12.6 5.0 7.9 6.8 0.1 3.1 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain zf-ISL3 PF14690.6 ORF99295 - 0.17 12.6 5.3 10 6.9 0.1 3.4 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 HypA PF01155.19 ORF99295 - 0.19 11.8 1.6 6.6 6.8 2.7 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Prok-RING_1 PF14446.6 ORF99295 - 0.28 11.1 3.0 16 5.5 0.0 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 CpXC PF14353.6 ORF99295 - 0.32 11.0 4.5 27 4.8 0.2 3.2 1 1 0 2 2 2 0 CpXC protein Zn_ribbon_SprT PF17283.2 ORF99295 - 0.35 10.8 9.9 0.93 9.4 5.1 2.7 2 1 0 2 2 2 0 SprT-like zinc ribbon domain zf-C2H2_6 PF13912.6 ORF99295 - 0.37 10.8 9.3 4.4 7.4 0.2 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger zf-FPG_IleRS PF06827.14 ORF99295 - 0.47 10.4 7.2 2.3 8.2 0.8 2.7 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS DZR PF12773.7 ORF99295 - 0.57 10.3 6.7 14 5.8 6.7 2.4 1 1 0 1 1 1 0 Double zinc ribbon Cys_rich_CPXG PF14255.6 ORF99295 - 0.62 10.0 3.2 5 7.1 0.1 3.0 3 0 0 3 3 3 0 Cysteine-rich CPXCG DUF2256 PF10013.9 ORF99295 - 1.4 9.1 4.2 94 3.2 0.2 3.4 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) Zn-ribbon_8 PF09723.10 ORF99295 - 2.8 8.1 11.8 3.3e+02 1.5 9.7 3.6 2 1 1 3 3 3 0 Zinc ribbon domain zinc_ribbon_9 PF14369.6 ORF99295 - 5.4 7.4 11.0 11 6.4 0.2 4.2 4 0 0 4 4 4 0 zinc-ribbon zf-BED PF02892.15 ORF99295 - 7.8 6.6 6.4 0.83 9.7 0.2 2.5 2 1 1 3 3 3 0 BED zinc finger adh_short_C2 PF13561.6 ORF95087 - 1.2e-09 38.1 0.0 1.6e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF95087 - 1.2e-07 31.4 0.0 1.7e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase DUF5588 PF17826.1 ORF92435 - 0.73 8.7 1.8 1 8.2 1.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5588) MAP65_ASE1 PF03999.12 ORF92435 - 5.4 5.6 6.4 7 5.2 6.4 1.1 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Carb_anhydrase PF00194.21 ORF91933 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Romo1 PF10247.9 ORF90066 - 3.2 8.2 21.6 2 8.9 5.5 3.3 2 1 1 3 3 3 0 Reactive mitochondrial oxygen species modulator 1 LRR_8 PF13855.6 ORF8811 - 2.4e-07 30.4 11.8 1.6e-05 24.6 2.1 2.9 2 1 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 ORF8811 - 7.1e-06 26.3 20.4 0.00014 22.1 6.0 3.3 2 1 2 4 4 4 3 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF8811 - 0.00011 21.8 5.5 0.0012 18.4 5.5 2.1 1 1 0 1 1 1 1 Leucine-rich repeat LRR_1 PF00560.33 ORF8811 - 0.35 11.6 12.7 1.4e+02 3.7 7.2 4.8 4 1 0 4 4 4 0 Leucine Rich Repeat LRR_6 PF13516.6 ORF8811 - 4.2 7.7 13.0 57 4.1 0.0 4.9 5 0 0 5 5 5 0 Leucine Rich repeat Amidase PF01425.21 ORF8326 - 9.6e-17 61.1 0.0 1.1e-16 60.8 0.0 1.0 1 0 0 1 1 1 1 Amidase GUCT PF08152.12 ORF82427 - 4.7e-22 78.1 0.1 7.4e-22 77.5 0.1 1.3 1 0 0 1 1 1 1 GUCT (NUC152) domain PIN_12 PF16289.5 ORF82427 - 0.18 12.3 5.5 0.26 11.8 5.5 1.3 1 0 0 1 1 1 0 PIN domain Bin3 PF06859.12 ORF82427 - 0.39 11.4 3.1 4.3 8.0 0.4 2.3 1 1 1 2 2 2 0 Bicoid-interacting protein 3 (Bin3) 14-3-3 PF00244.20 ORF80866 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF80866 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat VPS9 PF02204.18 ORF80427 - 4.2e-26 91.2 0.0 9e-26 90.1 0.0 1.5 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain IlvC PF01450.19 ORF80427 - 0.014 15.7 0.1 0.031 14.5 0.1 1.6 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain 14-3-3 PF00244.20 ORF79477 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF79477 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF79374 - 1.3e-35 123.3 6.1 1.3e-35 123.3 6.1 1.7 2 0 0 2 2 2 1 MalT-like TPR region GerE PF00196.19 ORF79374 - 5.7e-21 73.8 0.0 1.1e-20 72.9 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 ORF79374 - 0.00081 19.0 0.0 0.0026 17.4 0.0 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 ORF79374 - 0.0027 17.5 0.1 0.0089 15.8 0.1 2.0 1 0 0 1 1 1 1 Homeodomain-like domain Penicillinase_R PF03965.16 ORF79374 - 0.005 17.2 0.4 0.056 13.8 0.1 2.5 2 1 0 2 2 2 1 Penicillinase repressor Sigma70_r4 PF04545.16 ORF79374 - 0.0074 15.8 0.0 0.025 14.1 0.0 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_40 PF14493.6 ORF79374 - 0.027 14.9 0.9 0.079 13.4 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain TPR_8 PF13181.6 ORF79374 - 0.03 14.5 1.3 6.1 7.3 0.0 3.4 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF79374 - 0.038 14.1 2.6 11 6.4 0.2 3.9 3 0 0 3 3 3 0 Tetratricopeptide repeat HTH_38 PF13936.6 ORF79374 - 0.043 13.6 0.0 0.13 12.1 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain TPR_19 PF14559.6 ORF79374 - 0.089 13.3 8.3 1.5 9.4 0.1 3.1 3 1 1 4 4 3 0 Tetratricopeptide repeat HTH_24 PF13412.6 ORF79374 - 0.11 12.1 0.6 0.5 10.0 0.0 2.5 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding TPR_14 PF13428.6 ORF79374 - 0.67 10.9 6.3 5.3 8.1 0.2 3.5 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF79374 - 0.85 10.0 6.2 6.9 7.0 0.3 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat NrfD PF03916.14 ORF76555 - 3e-80 270.2 20.0 3.7e-80 269.9 20.0 1.0 1 0 0 1 1 1 1 Polysulphide reductase, NrfD UPF0181 PF03701.14 ORF76555 - 0.0039 16.8 0.0 0.0069 16.0 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0181) Sel1 PF08238.12 ORF75685 - 9.6e-13 48.4 7.0 2.2e-07 31.3 1.3 3.3 3 0 0 3 3 3 2 Sel1 repeat Armet PF10208.9 ORF75685 - 0.024 14.6 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding Pentapeptide PF00805.22 ORF74821 - 1.8e-13 49.8 12.6 8.2e-08 31.8 2.2 3.6 1 1 1 3 3 3 3 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF74821 - 7.1e-11 42.1 7.7 1.1e-09 38.3 3.5 2.5 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF74821 - 2.7e-08 33.8 5.5 0.0023 18.1 5.5 3.1 1 1 0 1 1 1 1 Pentapeptide repeats (9 copies) CfAFP PF05264.11 ORF74821 - 0.0045 17.0 0.5 0.18 11.8 0.1 2.2 1 1 1 2 2 2 2 Choristoneura fumiferana antifreeze protein (CfAFP) TAT_signal PF10518.9 ORF74821 - 0.21 11.5 3.0 3.6 7.6 0.0 2.7 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Peptidase_A4 PF01828.17 ORF74821 - 0.88 9.0 3.6 11 5.4 2.4 2.2 1 1 1 2 2 2 0 Peptidase A4 family MIG-14_Wnt-bd PF06664.12 ORF73847 - 0.00082 18.7 3.0 0.0018 17.5 2.9 1.6 1 1 0 1 1 1 1 Wnt-binding factor required for Wnt secretion DUF202 PF02656.15 ORF73847 - 0.73 10.3 3.5 4.1 7.9 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF202) GARS_A PF01071.19 ORF73416 - 1.7e-39 135.6 0.0 2.3e-39 135.2 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_C PF02843.16 ORF73416 - 1.5e-26 92.4 0.1 2.6e-26 91.7 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain zf-CCHC_5 PF14787.6 ORF72431 - 0.099 12.4 0.1 1.6 8.5 0.0 2.5 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger Ank_4 PF13637.6 ORF69706 - 3.5e-23 81.7 0.0 4.7e-11 43.0 0.0 2.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) ACBP PF00887.19 ORF69706 - 9.5e-21 73.8 0.6 1.5e-20 73.2 0.6 1.3 1 0 0 1 1 1 1 Acyl CoA binding protein Ank_2 PF12796.7 ORF69706 - 2.5e-14 53.6 0.0 3.9e-14 53.0 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF69706 - 5.1e-12 45.7 0.0 1.1e-05 25.6 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF69706 - 1.5e-10 40.3 0.0 0.00032 20.9 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF69706 - 3.7e-10 39.9 0.1 1.5e-06 28.4 0.0 2.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) PCI PF01399.27 ORF68813 - 5.6e-16 59.0 0.3 1.2e-15 58.0 0.3 1.6 1 0 0 1 1 1 1 PCI domain RPN6_C_helix PF18503.1 ORF68813 - 0.024 14.4 0.7 0.048 13.4 0.7 1.6 1 0 0 1 1 1 0 26S proteasome subunit RPN6 C-terminal helix domain Flavodoxin_5 PF12724.7 ORF68813 - 0.085 13.1 0.0 0.15 12.3 0.0 1.4 1 0 0 1 1 1 0 Flavodoxin domain Carb_anhydrase PF00194.21 ORF68556 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Radial_spoke_3 PF06098.11 ORF67572 - 2.9e-26 92.4 11.1 2.9e-26 92.4 11.1 2.0 1 1 1 2 2 2 1 Radial spoke protein 3 DUF2600 PF10776.9 ORF67572 - 0.0018 17.2 1.3 0.0023 16.9 1.2 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2600) DUF3340 PF11818.8 ORF67572 - 0.18 12.0 19.7 0.93 9.6 2.2 2.2 2 0 0 2 2 2 0 C-terminal domain of tail specific protease (DUF3340) ARGLU PF15346.6 ORF67572 - 0.36 10.7 42.9 0.12 12.2 19.1 2.2 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 Pinin_SDK_memA PF04696.13 ORF67572 - 3.2 7.8 33.3 1.2 9.2 15.4 2.3 2 0 0 2 2 2 0 pinin/SDK/memA/ protein conserved region Abhydro_lipase PF04083.16 ORF6647 - 3.1e-17 61.9 0.8 8.5e-17 60.5 0.0 2.2 3 0 0 3 3 3 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF6647 - 2.9e-14 53.4 0.0 3.7e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF6647 - 4e-05 23.0 0.0 5.6e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 zf-C2H2 PF00096.26 ORF66289 - 7.1e-11 41.9 9.7 0.012 16.0 0.6 3.5 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF66289 - 5.9e-09 36.0 10.7 0.035 14.9 0.1 3.6 3 0 0 3 3 3 3 C2H2-type zinc finger zf-Di19 PF05605.12 ORF66289 - 3.8e-08 33.5 8.9 1.2e-06 28.7 0.8 2.3 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-H2C2_2 PF13465.6 ORF66289 - 4e-08 33.3 12.4 0.0024 18.2 0.4 4.0 4 0 0 4 4 4 2 Zinc-finger double domain TerY_C PF15616.6 ORF66289 - 0.0085 16.2 0.1 0.014 15.5 0.1 1.4 1 0 0 1 1 1 1 TerY-C metal binding domain zf-C2H2_9 PF16293.5 ORF66289 - 0.0085 15.9 0.2 5 7.1 0.0 3.1 1 1 2 3 3 3 1 C2H2 type zinc-finger (1 copy) Zn_Tnp_IS1595 PF12760.7 ORF66289 - 0.02 14.8 4.6 0.02 14.8 4.6 2.4 3 0 0 3 3 2 0 Transposase zinc-ribbon domain zf-met PF12874.7 ORF66289 - 0.02 15.3 0.9 27 5.3 0.0 3.4 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF66289 - 0.025 14.9 4.8 5.6 7.4 4.8 3.1 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) FYVE PF01363.21 ORF66289 - 0.026 14.6 1.3 0.026 14.6 1.3 2.1 2 0 0 2 2 2 0 FYVE zinc finger zf-C2H2_jaz PF12171.8 ORF66289 - 0.028 14.7 0.4 19 5.7 0.0 3.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf_UBZ PF18439.1 ORF66289 - 0.043 13.4 8.1 2.1 8.0 0.4 3.5 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger TRAF6_Z2 PF18048.1 ORF66289 - 0.079 13.1 0.6 3.1 8.0 0.2 2.7 2 0 0 2 2 2 0 TNF receptor-associated factor 6 zinc finger 2 HNH_5 PF14279.6 ORF66289 - 0.091 12.6 0.8 1.6 8.7 0.1 2.6 1 1 1 2 2 2 0 HNH endonuclease zinc_ribbon_4 PF13717.6 ORF66289 - 0.11 12.5 6.7 1.5 8.8 1.8 3.1 2 1 0 2 2 2 0 zinc-ribbon domain YacG PF03884.14 ORF66289 - 0.12 12.1 0.4 21 4.9 0.1 2.7 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG zf-LITAF-like PF10601.9 ORF66289 - 0.13 12.6 5.0 7.9 6.8 0.1 3.1 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain zf-ISL3 PF14690.6 ORF66289 - 0.17 12.6 5.3 10 6.9 0.1 3.4 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 HypA PF01155.19 ORF66289 - 0.19 11.8 1.6 6.6 6.8 2.7 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Prok-RING_1 PF14446.6 ORF66289 - 0.28 11.1 3.0 16 5.5 0.0 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 CpXC PF14353.6 ORF66289 - 0.32 11.0 4.5 27 4.8 0.2 3.2 1 1 0 2 2 2 0 CpXC protein Zn_ribbon_SprT PF17283.2 ORF66289 - 0.35 10.8 9.9 0.93 9.4 5.1 2.7 2 1 0 2 2 2 0 SprT-like zinc ribbon domain zf-C2H2_6 PF13912.6 ORF66289 - 0.37 10.8 9.3 4.4 7.4 0.2 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger zf-FPG_IleRS PF06827.14 ORF66289 - 0.47 10.4 7.2 2.3 8.2 0.8 2.7 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS DZR PF12773.7 ORF66289 - 0.57 10.3 6.7 14 5.8 6.7 2.4 1 1 0 1 1 1 0 Double zinc ribbon Cys_rich_CPXG PF14255.6 ORF66289 - 0.62 10.0 3.2 5 7.1 0.1 3.0 3 0 0 3 3 3 0 Cysteine-rich CPXCG DUF2256 PF10013.9 ORF66289 - 1.4 9.1 4.2 94 3.2 0.2 3.4 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) Zn-ribbon_8 PF09723.10 ORF66289 - 2.8 8.1 11.8 3.3e+02 1.5 9.7 3.6 2 1 1 3 3 3 0 Zinc ribbon domain zinc_ribbon_9 PF14369.6 ORF66289 - 5.4 7.4 11.0 11 6.4 0.2 4.2 4 0 0 4 4 4 0 zinc-ribbon zf-BED PF02892.15 ORF66289 - 7.8 6.6 6.4 0.83 9.7 0.2 2.5 2 1 1 3 3 3 0 BED zinc finger zf-ANAPC11 PF12861.7 ORF65854 - 0.37 10.9 3.9 11 6.2 3.9 2.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger EFP PF01132.20 ORF65833 - 0.023 14.7 0.6 0.023 14.7 0.6 2.0 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain Sel_put PF04328.13 ORF65833 - 0.044 13.8 0.1 14 5.8 0.0 2.4 2 0 0 2 2 2 0 Selenoprotein, putative SLBP_RNA_bind PF15247.6 ORF65833 - 0.15 12.2 2.5 7.7 6.7 0.0 3.1 3 0 0 3 3 3 0 Histone RNA hairpin-binding protein RNA-binding domain 14-3-3 PF00244.20 ORF65484 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF65484 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat zf-C2H2 PF00096.26 ORF61374 - 7.1e-11 41.9 9.7 0.012 16.0 0.6 3.5 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF61374 - 5.9e-09 36.0 10.7 0.035 14.9 0.1 3.6 3 0 0 3 3 3 3 C2H2-type zinc finger zf-Di19 PF05605.12 ORF61374 - 3.8e-08 33.5 8.9 1.2e-06 28.7 0.8 2.3 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-H2C2_2 PF13465.6 ORF61374 - 4e-08 33.3 12.4 0.0024 18.2 0.4 4.0 4 0 0 4 4 4 2 Zinc-finger double domain TerY_C PF15616.6 ORF61374 - 0.0085 16.2 0.1 0.014 15.5 0.1 1.4 1 0 0 1 1 1 1 TerY-C metal binding domain zf-C2H2_9 PF16293.5 ORF61374 - 0.0085 15.9 0.2 5 7.1 0.0 3.1 1 1 2 3 3 3 1 C2H2 type zinc-finger (1 copy) Zn_Tnp_IS1595 PF12760.7 ORF61374 - 0.02 14.8 4.6 0.02 14.8 4.6 2.4 3 0 0 3 3 2 0 Transposase zinc-ribbon domain zf-met PF12874.7 ORF61374 - 0.02 15.3 0.9 27 5.3 0.0 3.4 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF61374 - 0.025 14.9 4.8 5.6 7.4 4.8 3.1 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) FYVE PF01363.21 ORF61374 - 0.026 14.6 1.3 0.026 14.6 1.3 2.1 2 0 0 2 2 2 0 FYVE zinc finger zf-C2H2_jaz PF12171.8 ORF61374 - 0.028 14.7 0.4 19 5.7 0.0 3.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf_UBZ PF18439.1 ORF61374 - 0.043 13.4 8.1 2.1 8.0 0.4 3.5 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger TRAF6_Z2 PF18048.1 ORF61374 - 0.079 13.1 0.6 3.1 8.0 0.2 2.7 2 0 0 2 2 2 0 TNF receptor-associated factor 6 zinc finger 2 HNH_5 PF14279.6 ORF61374 - 0.091 12.6 0.8 1.6 8.7 0.1 2.6 1 1 1 2 2 2 0 HNH endonuclease zinc_ribbon_4 PF13717.6 ORF61374 - 0.11 12.5 6.7 1.5 8.8 1.8 3.1 2 1 0 2 2 2 0 zinc-ribbon domain YacG PF03884.14 ORF61374 - 0.12 12.1 0.4 21 4.9 0.1 2.7 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG zf-LITAF-like PF10601.9 ORF61374 - 0.13 12.6 5.0 7.9 6.8 0.1 3.1 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain zf-ISL3 PF14690.6 ORF61374 - 0.17 12.6 5.3 10 6.9 0.1 3.4 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 HypA PF01155.19 ORF61374 - 0.19 11.8 1.6 6.6 6.8 2.7 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Prok-RING_1 PF14446.6 ORF61374 - 0.28 11.1 3.0 16 5.5 0.0 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 CpXC PF14353.6 ORF61374 - 0.32 11.0 4.5 27 4.8 0.2 3.2 1 1 0 2 2 2 0 CpXC protein Zn_ribbon_SprT PF17283.2 ORF61374 - 0.35 10.8 9.9 0.93 9.4 5.1 2.7 2 1 0 2 2 2 0 SprT-like zinc ribbon domain zf-C2H2_6 PF13912.6 ORF61374 - 0.37 10.8 9.3 4.4 7.4 0.2 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger zf-FPG_IleRS PF06827.14 ORF61374 - 0.47 10.4 7.2 2.3 8.2 0.8 2.7 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS DZR PF12773.7 ORF61374 - 0.57 10.3 6.7 14 5.8 6.7 2.4 1 1 0 1 1 1 0 Double zinc ribbon Cys_rich_CPXG PF14255.6 ORF61374 - 0.62 10.0 3.2 5 7.1 0.1 3.0 3 0 0 3 3 3 0 Cysteine-rich CPXCG DUF2256 PF10013.9 ORF61374 - 1.4 9.1 4.2 94 3.2 0.2 3.4 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) Zn-ribbon_8 PF09723.10 ORF61374 - 2.8 8.1 11.8 3.3e+02 1.5 9.7 3.6 2 1 1 3 3 3 0 Zinc ribbon domain zinc_ribbon_9 PF14369.6 ORF61374 - 5.4 7.4 11.0 11 6.4 0.2 4.2 4 0 0 4 4 4 0 zinc-ribbon zf-BED PF02892.15 ORF61374 - 7.8 6.6 6.4 0.83 9.7 0.2 2.5 2 1 1 3 3 3 0 BED zinc finger Peptidase_U32 PF01136.19 ORF6075 - 1.8e-11 43.6 0.0 2.3e-11 43.3 0.0 1.1 1 0 0 1 1 1 1 Peptidase family U32 Carb_anhydrase PF00194.21 ORF59123 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase 14-3-3 PF00244.20 ORF56383 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF56383 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat PRIMA1 PF16101.5 ORF56106 - 3.3 7.7 7.1 0.53 10.3 0.8 2.2 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 Ins145_P3_rec PF08709.11 ORF55909 - 0.0083 15.3 0.0 0.018 14.2 0.0 1.5 1 1 0 1 1 1 1 Inositol 1,4,5-trisphosphate/ryanodine receptor TF_Zn_Ribbon PF08271.12 ORF54957 - 0.00018 20.9 1.4 0.00038 19.9 1.1 1.8 1 1 0 1 1 1 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 ORF54957 - 0.036 14.0 1.7 0.083 12.8 0.7 2.3 1 1 0 1 1 1 0 Putative transposase DNA-binding domain Nudix_N_2 PF14803.6 ORF54957 - 0.085 12.8 0.5 0.085 12.8 0.5 2.4 3 0 0 3 3 3 0 Nudix N-terminal Kelch_1 PF01344.25 ORF54614 - 5.8e-16 57.8 1.4 1.3e-05 24.7 0.1 3.6 3 0 0 3 3 3 3 Kelch motif Kelch_4 PF13418.6 ORF54614 - 2.9e-11 43.2 0.2 0.00055 19.9 0.1 3.5 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF54614 - 1.9e-09 37.5 5.5 0.00078 19.7 0.1 3.7 3 1 1 4 4 4 2 Kelch motif Kelch_5 PF13854.6 ORF54614 - 2.6e-06 27.3 2.8 0.026 14.5 0.3 3.6 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 ORF54614 - 7.2e-06 26.2 0.0 0.43 10.9 0.1 3.7 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF54614 - 0.0013 18.6 1.3 0.61 10.2 0.1 3.6 4 0 0 4 4 4 1 Kelch motif CCDC24 PF15669.5 ORF54207 - 0.023 14.6 0.6 0.045 13.6 0.6 1.5 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family zf-CCHC_5 PF14787.6 ORF53237 - 0.099 12.4 0.1 1.6 8.5 0.0 2.5 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger Carb_anhydrase PF00194.21 ORF50134 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Carb_anhydrase PF00194.21 ORF49000 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase p450 PF00067.22 ORF48642 - 1.4e-28 99.9 0.1 1.6e-28 99.7 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Glyco_tran_WbsX PF14307.6 ORF48642 - 0.031 13.7 0.0 0.04 13.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase WbsX 14-3-3 PF00244.20 ORF46130 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF46130 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat PAF-AH_p_II PF03403.13 ORF44899 - 0.017 13.6 0.1 0.14 10.6 0.0 2.0 2 0 0 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 ORF44899 - 0.028 13.4 0.0 0.045 12.7 0.0 1.4 1 0 0 1 1 1 0 Chlorophyllase enzyme Carb_anhydrase PF00194.21 ORF44109 - 3.5e-33 115.2 0.0 5.2e-33 114.6 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DTW PF03942.15 ORF43884 - 2.5e-42 144.9 0.0 2.9e-42 144.6 0.0 1.1 1 0 0 1 1 1 1 DTW domain EF-hand_1 PF00036.32 ORF43426 - 7.9e-12 43.8 5.2 2.6e-05 23.5 0.4 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF43426 - 1.3e-09 38.4 2.8 2.9e-09 37.3 2.8 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF43426 - 1.4e-09 37.1 4.5 0.00023 20.8 0.4 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF43426 - 5.3e-06 25.7 1.6 0.038 13.5 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF43426 - 4.3e-05 23.3 6.7 0.052 13.4 0.3 2.6 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF43426 - 0.072 13.0 0.7 11 6.0 0.2 2.4 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Cyt-b5 PF00173.28 ORF42557 - 2.2e-07 30.9 0.0 5e-07 29.8 0.0 1.7 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Lectin_C PF00059.21 ORF39593 - 7e-14 52.5 1.4 5.4e-13 49.6 1.4 2.1 2 0 0 2 2 2 1 Lectin C-type domain UL45 PF05473.12 ORF39593 - 0.0098 15.5 0.1 0.018 14.7 0.1 1.3 1 0 0 1 1 1 1 UL45 protein, carbohydrate-binding C-type lectin-like Abhydrolase_4 PF08386.10 ORF38756 - 3.3e-15 56.1 0.0 1.7e-14 53.8 0.0 2.0 2 1 0 2 2 2 1 TAP-like protein Abhydrolase_2 PF02230.16 ORF38168 - 1.4e-56 191.8 0.0 1.6e-56 191.6 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF38168 - 4.1e-11 42.8 0.0 5.5e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF38168 - 3.7e-06 26.6 0.8 0.016 14.7 0.0 2.9 2 1 1 3 3 3 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF38168 - 0.0047 16.2 0.2 0.2 10.9 0.0 2.7 2 1 1 3 3 3 1 Serine aminopeptidase, S33 FSH1 PF03959.13 ORF38168 - 0.021 14.5 0.1 0.051 13.2 0.1 1.7 1 1 0 1 1 1 0 Serine hydrolase (FSH1) BAAT_C PF08840.11 ORF38168 - 0.15 12.0 0.4 9 6.2 0.1 2.1 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal 14-3-3 PF00244.20 ORF37965 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF37965 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat Carb_anhydrase PF00194.21 ORF37323 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase NOT2_3_5 PF04153.18 ORF3691 - 2.8e-19 69.5 1.4 4.9e-19 68.7 1.4 1.3 1 0 0 1 1 1 1 NOT2 / NOT3 / NOT5 family Exonuc_VII_L PF02601.15 ORF35563 - 0.24 10.9 5.1 0.29 10.7 5.1 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit YtxH PF12732.7 ORF35563 - 3.5 8.2 7.6 5e+02 1.3 7.6 3.0 1 1 0 1 1 1 0 YtxH-like protein FtsX_ECD PF18075.1 ORF35563 - 5.9 7.6 10.5 1.5 9.5 4.4 2.9 1 1 2 3 3 3 0 FtsX extracellular domain PAS_6 PF08348.11 ORF34567 - 2e-36 124.3 0.1 3.8e-36 123.4 0.1 1.4 1 0 0 1 1 1 1 YheO-like PAS domain HTH_22 PF13309.6 ORF34567 - 2e-19 69.4 0.3 3.3e-19 68.7 0.3 1.3 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.6 ORF34567 - 2e-05 24.2 0.0 4.6e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_7 PF02796.15 ORF34567 - 0.00031 20.7 0.1 0.001 19.1 0.0 1.9 2 1 0 2 2 2 1 Helix-turn-helix domain of resolvase DUF658 PF04936.12 ORF34567 - 0.0034 17.2 0.1 0.0056 16.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF658) HTH_17 PF12728.7 ORF34567 - 0.0051 17.0 0.0 0.01 16.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_10 PF04967.12 ORF34567 - 0.022 14.5 0.1 0.055 13.3 0.1 1.6 1 0 0 1 1 1 0 HTH DNA binding domain dCache_1 PF02743.18 ORF34567 - 0.046 13.5 0.1 0.12 12.1 0.0 1.7 2 1 0 2 2 2 0 Cache domain GerE PF00196.19 ORF34567 - 0.08 12.5 0.0 0.17 11.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_29 PF13551.6 ORF34567 - 0.097 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix Phage_CI_repr PF07022.13 ORF34567 - 0.1 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain DUF3791 PF12668.7 ORF34567 - 0.12 12.4 0.1 0.37 10.9 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3791) MerR PF00376.23 ORF34567 - 0.15 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 MerR family regulatory protein SGL PF08450.12 ORF32729 - 4.2e-18 65.8 0.0 8.4e-18 64.8 0.0 1.5 1 1 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 ORF32729 - 3.8e-11 43.0 0.0 8.5e-06 25.8 0.0 3.1 2 1 0 2 2 2 2 Strictosidine synthase NHL PF01436.21 ORF32729 - 1.2e-09 37.8 0.0 3.9 7.7 0.0 5.8 6 0 0 6 6 6 4 NHL repeat Arylesterase PF01731.20 ORF32729 - 8.8e-07 29.0 0.0 0.003 17.7 0.0 3.2 3 1 0 3 3 3 2 Arylesterase Lactonase PF10282.9 ORF32729 - 0.19 11.0 0.0 2.6 7.2 0.0 2.1 1 1 2 3 3 3 0 Lactonase, 7-bladed beta-propeller 14-3-3 PF00244.20 ORF31266 - 3.8e-77 258.8 11.3 4.3e-77 258.6 11.3 1.0 1 0 0 1 1 1 1 14-3-3 protein PUB PF09409.10 ORF30183 - 2.5e-15 56.2 0.0 3.7e-15 55.6 0.0 1.3 1 0 0 1 1 1 1 PUB domain Tim29 PF10171.9 ORF30183 - 0.0013 18.3 1.5 0.0052 16.3 1.1 1.9 2 0 0 2 2 2 1 Translocase of the Inner Mitochondrial membrane 29 STI1 PF17830.1 ORF30183 - 0.16 11.9 28.7 3.2 7.8 25.8 3.4 2 1 0 2 2 2 0 STI1 domain GerD PF17898.1 ORF30183 - 3.3 7.7 20.9 0.82 9.6 14.1 2.6 3 0 0 3 3 3 0 Spore germination GerD central core domain Bep_C_terminal PF17841.1 ORF30183 - 8.8 6.6 7.3 3.4 8.0 1.6 2.5 3 0 0 3 3 3 0 BID domain of Bartonella effector protein (Bep) Ank_2 PF12796.7 ORF28644 - 1.2e-11 45.1 0.8 0.0091 16.6 0.1 3.2 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF28644 - 4e-09 36.6 5.5 2.6e-05 24.4 0.2 4.8 4 1 1 5 5 5 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF28644 - 1.5e-07 31.1 0.4 0.038 14.5 0.0 4.8 5 0 0 5 5 5 1 Ankyrin repeat Ank_4 PF13637.6 ORF28644 - 4.1e-07 30.4 2.5 0.0034 17.9 0.0 3.9 3 1 0 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF28644 - 2.9e-05 24.3 6.0 1.8 9.2 0.0 4.9 4 1 0 4 4 4 2 Ankyrin repeat PHBC_N PF12551.8 ORF28644 - 0.017 14.9 0.5 0.049 13.4 0.5 1.8 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase N terminal MOSC PF03473.17 ORF26238 - 4.2e-12 46.2 0.0 6.5e-12 45.6 0.0 1.3 1 0 0 1 1 1 1 MOSC domain Ribosomal_L30 PF00327.20 ORF25070 - 4.6e-18 64.8 3.4 8.7e-18 64.0 3.4 1.5 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L30_N PF08079.12 ORF25070 - 1.7e-12 47.4 19.5 3.7e-12 46.3 19.5 1.6 1 0 0 1 1 1 1 Ribosomal L30 N-terminal domain Ribosomal_S30 PF04758.14 ORF25070 - 1.7 8.9 8.3 5.6 7.2 8.3 2.0 1 1 0 1 1 1 0 Ribosomal protein S30 PTEN_C2 PF10409.9 ORF23951 - 3.4e-06 26.8 1.6 6e-06 26.0 1.6 1.4 1 0 0 1 1 1 1 C2 domain of PTEN tumour-suppressor protein Pup PF05639.11 ORF23951 - 1.4 9.9 0.1 1.4 9.9 0.1 4.1 2 2 1 3 3 3 0 Pup-like protein Glucosamine_iso PF01182.20 ORF23631 - 1.3e-16 61.2 0.0 3.3e-16 59.8 0.0 1.6 1 1 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Pentapeptide PF00805.22 ORF22659 - 1.8e-13 49.8 12.6 8.2e-08 31.8 2.2 3.6 1 1 1 3 3 3 3 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF22659 - 7.1e-11 42.1 7.7 1.1e-09 38.3 3.5 2.5 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF22659 - 2.7e-08 33.8 5.5 0.0023 18.1 5.5 3.1 1 1 0 1 1 1 1 Pentapeptide repeats (9 copies) CfAFP PF05264.11 ORF22659 - 0.0045 17.0 0.5 0.18 11.8 0.1 2.2 1 1 1 2 2 2 2 Choristoneura fumiferana antifreeze protein (CfAFP) TAT_signal PF10518.9 ORF22659 - 0.21 11.5 3.0 3.6 7.6 0.0 2.7 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Peptidase_A4 PF01828.17 ORF22659 - 0.88 9.0 3.6 11 5.4 2.4 2.2 1 1 1 2 2 2 0 Peptidase A4 family DUF155 PF02582.14 ORF22354 - 3.8e-22 79.2 0.0 4.5e-22 79.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YagE family COG1723 EF_TS PF00889.19 ORF20491 - 3.4e-15 56.2 0.0 5e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 Elongation factor TS Carb_anhydrase PF00194.21 ORF19374 - 7.5e-33 114.1 0.0 1.2e-32 113.5 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Rubella_Capsid PF05750.11 ORF19247 - 0.17 11.5 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Rubella capsid protein LRAT PF04970.13 ORF17566 - 7.2e-05 23.1 0.0 0.0001 22.6 0.0 1.2 1 0 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 ORF17566 - 0.0093 15.8 0.0 0.017 15.0 0.0 1.4 1 0 0 1 1 1 1 PPPDE putative peptidase domain FAA_hydrolase PF01557.18 ORF112583 - 1.3e-41 142.7 0.0 1.6e-41 142.4 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family STAT1_TAZ2bind PF12162.8 ORF112583 - 0.24 11.0 0.7 0.51 10.0 0.1 1.9 2 0 0 2 2 2 0 STAT1 TAZ2 binding domain AP4E_app_platf PF14807.6 ORF110598 - 4.5e-19 68.6 0.0 6e-19 68.3 0.0 1.2 1 0 0 1 1 1 1 Adaptin AP4 complex epsilon appendage platform AP3B1_C PF14796.6 ORF110598 - 0.023 14.9 6.7 0.14 12.4 1.2 2.3 1 1 1 2 2 2 0 Clathrin-adaptor complex-3 beta-1 subunit C-terminal Carb_anhydrase PF00194.21 ORF108377 - 7.4e-34 117.4 0.0 1.2e-33 116.8 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Aminotran_5 PF00266.19 ORF107076 - 1.9e-06 27.1 0.0 2.2e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DUF1839 PF08893.10 ORF104582 - 0.028 13.6 0.0 0.039 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1839) PAF-AH_p_II PF03403.13 ORF104297 - 0.017 13.6 0.1 0.14 10.6 0.0 2.0 2 0 0 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 ORF104297 - 0.028 13.4 0.0 0.045 12.7 0.0 1.4 1 0 0 1 1 1 0 Chlorophyllase enzyme Tcf25 PF04910.14 ORF104090 - 3.4e-05 23.1 0.0 3.9e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Transcriptional repressor TCF25 Cys_Knot_tox PF17486.2 ORF104090 - 0.063 13.5 0.6 0.11 12.7 0.6 1.4 1 0 0 1 1 1 0 Cystine knot toxins Carb_anhydrase PF00194.21 ORF103285 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Glucosamine_iso PF01182.20 ORF103196 - 1.3e-16 61.2 0.0 3.3e-16 59.8 0.0 1.6 1 1 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VWA PF00092.28 NODE_30415_length_715_cov_84.498529_g24047_i0forward_frame_1 - 0.00015 22.0 0.2 0.00029 21.1 0.0 1.6 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 NODE_30415_length_715_cov_84.498529_g24047_i0forward_frame_1 - 0.0067 16.4 0.0 0.052 13.5 0.0 2.1 1 1 1 2 2 2 1 von Willebrand factor type A domain DUF2408 PF10303.9 NODE_30415_length_715_cov_84.498529_g24047_i0forward_frame_1 - 0.16 12.5 0.9 0.37 11.4 0.6 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2408) DMPK_coil PF08826.10 NODE_30415_length_715_cov_84.498529_g24047_i0forward_frame_1 - 0.21 11.7 1.7 1.1 9.5 0.0 2.7 3 0 0 3 3 3 0 DMPK coiled coil domain like DUF508 PF04370.12 NODE_30381_length_716_cov_19.881057_g24016_i0reverse_frame_1 - 0.21 11.3 7.0 0.37 10.5 7.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF508) Fer4_24 PF18109.1 NODE_30338_length_717_cov_2.491202_g23977_i0reverse_frame_1 - 0.16 12.3 1.9 0.41 10.9 0.2 2.5 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain zf_C2H2_6 PF18450.1 NODE_30334_length_717_cov_7.812317_g23973_i0forward_frame_1 - 1 9.1 9.4 1.2 8.9 1.4 2.7 1 1 1 2 2 2 0 Zinc Finger domain YolD PF08863.10 NODE_30321_length_717_cov_77.623167_g23960_i0forward_frame_1 - 0.079 13.0 0.5 0.14 12.2 0.5 1.5 1 0 0 1 1 1 0 YolD-like protein TPR_12 PF13424.6 NODE_30293_length_717_cov_22632.322581_g23936_i0reverse_frame_1 - 0.0011 19.2 0.1 0.0054 17.0 0.1 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_30293_length_717_cov_22632.322581_g23936_i0reverse_frame_1 - 0.0018 18.1 0.1 0.0029 17.4 0.1 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_30293_length_717_cov_22632.322581_g23936_i0reverse_frame_1 - 0.016 15.2 0.1 0.064 13.4 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_30293_length_717_cov_22632.322581_g23936_i0reverse_frame_1 - 0.043 14.0 0.8 0.43 10.9 0.3 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat AgrB PF04647.15 NODE_30293_length_717_cov_22632.322581_g23936_i0reverse_frame_1 - 0.18 11.1 2.3 0.39 10.0 2.3 1.5 1 0 0 1 1 1 0 Accessory gene regulator B WDCP PF15390.6 NODE_30291_length_718_cov_8.743777_g23934_i0forward_frame_3 - 1.2 7.5 9.1 1.4 7.2 9.1 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Presenilin PF01080.17 NODE_30291_length_718_cov_8.743777_g23934_i0forward_frame_3 - 7.7 5.2 6.8 11 4.6 6.8 1.2 1 0 0 1 1 1 0 Presenilin RGS-like PF09128.11 NODE_30289_length_718_cov_62.159590_g23932_i0forward_frame_3 - 3.5 7.3 5.8 3.5 7.3 1.6 2.1 2 0 0 2 2 2 0 Regulator of G protein signalling-like domain Srg PF02118.21 NODE_30282_length_718_cov_110.629575_g23926_i0reverse_frame_3 - 0.027 14.1 1.2 0.047 13.3 1.2 1.4 1 0 0 1 1 1 0 Srg family chemoreceptor zf-LITAF-like PF10601.9 NODE_30282_length_718_cov_110.629575_g23926_i0reverse_frame_3 - 0.17 12.1 0.4 0.17 12.1 0.4 2.4 2 1 0 2 2 2 0 LITAF-like zinc ribbon domain PBP1_TM PF14812.6 NODE_30261_length_718_cov_717.884334_g23910_i0forward_frame_3 - 0.028 14.8 1.4 0.054 13.9 0.3 2.0 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Rdx PF10262.9 NODE_30259_length_718_cov_10471.799414_g21013_i6forward_frame_3 - 6.2e-07 29.5 0.0 1.3e-06 28.4 0.0 1.5 1 0 0 1 1 1 1 Rdx family Rdx PF10262.9 NODE_30258_length_718_cov_10471.821376_g21013_i5reverse_frame_3 - 6.3e-07 29.5 0.0 1.3e-06 28.4 0.0 1.5 1 0 0 1 1 1 1 Rdx family EpsG PF14897.6 NODE_30258_length_718_cov_10471.821376_g21013_i5reverse_frame_2 - 0.02 14.2 3.8 0.033 13.5 3.8 1.3 1 0 0 1 1 1 0 EpsG family LysR_substrate PF03466.20 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 1.3e-23 83.5 0.2 2.5e-23 82.6 0.0 1.6 2 0 0 2 2 2 1 LysR substrate binding domain HTH_1 PF00126.27 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 7.9e-22 77.0 0.4 1.3e-21 76.3 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.00012 21.8 0.2 0.00023 20.9 0.2 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain MarR PF01047.22 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.014 15.3 0.0 0.034 14.1 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_24 PF13412.6 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.021 14.4 0.0 0.053 13.1 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.034 14.0 0.0 0.096 12.6 0.0 1.7 1 0 0 1 1 1 0 MarR family SBP_bac_11 PF13531.6 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.069 12.9 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein HTH_20 PF12840.7 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.088 12.9 0.8 5.7 7.1 0.2 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.1 12.8 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_28 PF13518.6 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.1 12.8 0.1 0.59 10.3 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Mga PF05043.13 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.12 13.0 0.1 0.56 10.8 0.0 2.0 1 1 1 2 2 2 0 Mga helix-turn-helix domain HTH_23 PF13384.6 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.13 12.1 0.0 0.4 10.5 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain HTH_38 PF13936.6 NODE_30253_length_719_cov_4.033626_g23904_i0forward_frame_3 - 0.32 10.8 1.4 0.36 10.6 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain WD40 PF00400.32 NODE_30248_length_719_cov_95.897661_g23899_i0reverse_frame_3 - 5.9e-08 33.3 0.8 1.6 9.7 0.0 4.7 4 0 0 4 4 4 4 WD domain, G-beta repeat Molybdopterin PF00384.22 NODE_30223_length_720_cov_2.956204_g23880_i0reverse_frame_3 - 5.6e-44 150.8 0.0 6.7e-44 150.5 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Glycos_trans_3N PF02885.17 NODE_30210_length_720_cov_98.240876_g23869_i0reverse_frame_3 - 0.076 12.9 0.0 1.1 9.2 0.0 2.7 2 2 0 2 2 2 0 Glycosyl transferase family, helical bundle domain Mac PF12464.8 NODE_30210_length_720_cov_98.240876_g23869_i0reverse_frame_3 - 0.32 11.3 1.7 0.38 11.0 0.1 2.0 2 0 0 2 2 2 0 Maltose acetyltransferase MSC PF09402.10 ORF9788 - 0.75 9.2 4.3 11 5.4 0.3 2.6 2 1 1 3 3 3 0 Man1-Src1p-C-terminal domain DUF3099 PF11298.8 ORF9788 - 1.1 9.4 3.8 0.67 10.1 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3099) TRP PF06011.12 ORF9788 - 6.2 5.4 29.7 8.8 4.9 29.7 1.3 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel EamA PF00892.20 ORF9739 - 1.1e-14 54.8 23.4 4.7e-12 46.2 10.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF4203 PF13886.6 ORF9739 - 0.011 15.4 6.1 0.011 15.4 6.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4203) DUF4131 PF13567.6 ORF9739 - 0.38 10.4 15.2 4.1 7.0 1.2 3.1 2 1 0 3 3 3 0 Domain of unknown function (DUF4131) DUF1129 PF06570.11 ORF9739 - 2.4 7.6 13.3 0.34 10.4 5.8 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1129) MFS_1 PF07690.16 ORF92792 - 1.3e-10 40.7 8.2 1.7e-10 40.3 8.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF92792 - 0.017 14.0 8.1 0.022 13.6 8.1 1.2 1 0 0 1 1 1 0 Sugar (and other) transporter PGG PF13962.6 ORF92792 - 0.34 10.7 8.9 1.9 8.3 0.5 2.9 3 0 0 3 3 3 0 Domain of unknown function Apt1 PF10351.9 ORF91446 - 2e-07 30.3 12.5 2.5e-07 29.9 12.5 1.0 1 0 0 1 1 1 1 Golgi-body localisation protein domain IL17R_fnIII_D2 PF16578.5 ORF91446 - 0.54 10.8 2.4 1.3 9.6 0.4 2.4 2 1 1 3 3 3 0 Interleukin 17 receptor D Gti1_Pac2 PF09729.9 ORF91446 - 0.76 9.8 7.8 0.71 9.9 6.8 1.4 1 1 0 1 1 1 0 Gti1/Pac2 family DUF4612 PF15389.6 ORF91446 - 5.3 8.1 11.0 19 6.4 10.9 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4612) GPS2_interact PF15784.5 ORF90987 - 0.0035 17.8 4.6 0.0075 16.7 4.6 1.5 1 0 0 1 1 1 1 G-protein pathway suppressor 2-interacting domain RNHCP PF12647.7 ORF89971 - 0.27 11.2 4.5 0.75 9.8 4.5 1.7 1 0 0 1 1 1 0 RNHCP domain PIP5K PF01504.18 ORF89477 - 1.3e-61 208.2 9.9 1.7e-61 207.9 9.9 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase DUF520 PF04461.13 ORF89477 - 0.006 16.7 0.1 0.011 15.9 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF520) Methyltransf_11 PF08241.12 ORF87975 - 3.2e-17 62.9 0.0 4.8e-17 62.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF87975 - 1.1e-15 58.0 0.0 1.7e-15 57.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF87975 - 1.7e-11 44.1 0.0 2.4e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF87975 - 2e-07 31.7 0.0 3.4e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF87975 - 5.9e-06 25.8 0.0 9.2e-06 25.2 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF87975 - 0.00013 21.9 0.0 0.00019 21.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF87975 - 0.00031 20.3 0.0 0.00047 19.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Spermine_synth PF01564.17 ORF87975 - 0.0038 16.6 0.0 0.0079 15.6 0.0 1.5 2 0 0 2 2 2 1 Spermine/spermidine synthase domain Methyltransf_29 PF03141.16 ORF87975 - 0.0053 15.4 0.0 0.0073 14.9 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase PrmA PF06325.13 ORF87975 - 0.23 10.8 0.0 0.4 10.0 0.0 1.5 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 ORF87706 - 6.5e-14 52.3 0.0 1.1e-13 51.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF87706 - 6e-12 46.1 0.0 1.1e-11 45.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF87706 - 6.6e-11 42.2 0.0 1.1e-10 41.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF87706 - 3.8e-08 33.4 0.0 5.7e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF87706 - 4.4e-08 32.7 0.1 8.6e-08 31.8 0.1 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF87706 - 3.2e-05 24.6 0.0 5.2e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DUF1799 PF08809.11 ORF87706 - 0.038 14.2 0.0 0.085 13.1 0.0 1.6 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) Pox_MCEL PF03291.16 ORF87706 - 0.13 11.3 0.0 0.44 9.6 0.0 1.7 1 1 0 1 1 1 0 mRNA capping enzyme VGPC1_C PF16799.5 ORF86044 - 0.0093 15.9 1.7 0.025 14.5 1.7 1.8 1 0 0 1 1 1 1 C-terminal membrane-localisation domain of ion-channel, VCN1 Peptidase_A3 PF02160.15 ORF86044 - 0.071 12.6 4.0 0.098 12.1 4.0 1.2 1 0 0 1 1 1 0 Cauliflower mosaic virus peptidase (A3) FDX-ACB PF03147.14 ORF86044 - 0.11 12.9 2.8 0.56 10.7 2.8 2.1 2 1 0 2 2 2 0 Ferredoxin-fold anticodon binding domain MAS20 PF02064.15 ORF86044 - 0.35 11.0 8.5 0.71 10.0 8.5 1.5 1 0 0 1 1 1 0 MAS20 protein import receptor TFIIA PF03153.13 ORF86044 - 0.45 10.4 16.5 0.56 10.2 16.5 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Exonuc_VII_L PF02601.15 ORF86044 - 1.3 8.5 9.8 1.7 8.1 9.8 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit HYR PF02494.16 ORF85044 - 2.3e-17 63.1 12.3 1.7e-06 28.3 0.2 3.2 3 0 0 3 3 3 3 HYR domain Coiled PF05710.12 ORF85044 - 0.13 13.1 2.2 22 6.0 0.0 3.2 3 0 0 3 3 3 0 Coiled coil Big_7 PF17957.1 ORF85044 - 3 8.7 6.9 88 4.0 3.3 3.5 2 1 0 2 2 2 0 Bacterial Ig domain Myotoxins PF00819.17 ORF85044 - 5 7.5 5.2 19 5.6 0.0 3.0 3 0 0 3 3 3 0 Myotoxin, crotamine MotA_ExbB PF01618.16 ORF84018 - 1.1e-33 115.6 2.3 1.3e-33 115.4 1.5 1.6 1 1 0 1 1 1 1 MotA/TolQ/ExbB proton channel family DUF3566 PF12089.8 ORF84018 - 0.1 12.9 6.1 0.1 13.0 2.6 2.2 2 0 0 2 2 2 0 Transmembrane domain of unknown function (DUF3566) Vpu PF00558.19 ORF84018 - 0.42 10.4 1.8 0.75 9.6 0.1 2.1 2 0 0 2 2 2 0 Vpu protein LapA_dom PF06305.11 ORF84018 - 0.51 10.2 4.0 0.32 10.8 0.5 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Band_7 PF01145.25 ORF83312 - 9.7e-08 32.2 0.3 9.7e-08 32.2 0.3 1.9 2 0 0 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 ORF83312 - 2.9e-07 30.4 0.0 5.6e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of band_7 Band_7_1 PF13421.6 ORF83312 - 0.0004 20.2 0.7 0.0079 15.9 0.0 2.1 2 0 0 2 2 2 1 SPFH domain-Band 7 family DUF3598 PF12204.8 ORF83312 - 0.02 14.4 0.1 0.037 13.5 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3598) DUF406 PF04175.12 ORF83312 - 0.3 11.6 2.6 15 6.2 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF406) BCAS2 PF05700.11 ORF8314 - 9.9e-48 162.6 7.0 1.1e-47 162.4 7.0 1.0 1 0 0 1 1 1 1 Breast carcinoma amplified sequence 2 (BCAS2) DUF4239 PF14023.6 ORF8314 - 0.0089 15.8 1.5 0.075 12.7 0.8 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF4239) RNHCP PF12647.7 ORF80745 - 0.27 11.2 4.5 0.75 9.8 4.5 1.7 1 0 0 1 1 1 0 RNHCP domain PPR_2 PF13041.6 ORF79924 - 1.2e-09 38.2 0.0 0.084 13.1 0.0 4.2 4 0 0 4 4 4 3 PPR repeat family PPR_3 PF13812.6 ORF79924 - 7.4e-05 22.7 0.0 0.0098 15.9 0.0 3.4 4 0 0 4 4 4 1 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF79924 - 0.033 13.5 0.0 0.058 12.7 0.0 1.4 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP IL4 PF00727.18 ORF79924 - 0.16 12.2 0.0 0.29 11.4 0.0 1.4 1 0 0 1 1 1 0 Interleukin 4 ECH_1 PF00378.20 ORF78075 - 7.7e-23 81.1 0.0 8.6e-23 80.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF78075 - 1.1e-08 35.0 0.0 1.4e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase NAD_binding_1 PF00175.21 ORF77238 - 3.7e-15 56.5 0.0 6.3e-15 55.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_1 PF00667.20 ORF77238 - 2.4e-10 40.4 0.1 4.7e-10 39.4 0.0 1.5 2 0 0 2 2 2 1 FAD binding domain NAD_binding_6 PF08030.12 ORF77238 - 0.031 14.4 0.0 0.21 11.7 0.0 2.1 1 1 0 1 1 1 0 Ferric reductase NAD binding domain AAA_21 PF13304.6 ORF77238 - 0.15 11.9 1.9 0.13 12.0 0.2 1.7 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks76.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks76.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks76.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks76.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YqaH PF17448.2 ORF76474 - 0.012 15.9 0.0 0.029 14.7 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized YqaH-like zn-ribbon_14 PF16503.5 ORF74824 - 1.3e-16 59.8 5.9 1.3e-16 59.7 2.0 2.4 2 0 0 2 2 2 1 Zinc-ribbon ATP_bind_3 PF01171.20 ORF74824 - 7.8e-10 38.8 0.0 1.4e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 PP-loop family SPASM PF13186.6 ORF74824 - 0.004 17.6 0.3 0.067 13.7 0.0 2.4 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain RecR PF02132.15 ORF74824 - 0.77 9.4 7.3 0.13 11.8 2.3 2.2 2 0 0 2 2 2 0 RecR protein DASH_Dad2 PF08654.10 ORF67974 - 0.0021 18.5 0.9 0.0021 18.5 0.9 3.0 2 1 2 4 4 4 1 DASH complex subunit Dad2 DASH_Duo1 PF08651.10 ORF67974 - 0.027 14.2 6.7 0.3 10.9 0.1 3.5 3 1 0 3 3 3 0 DASH complex subunit Duo1 Apolipoprotein PF01442.18 ORF67974 - 0.072 13.0 8.6 0.55 10.1 1.0 2.6 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF67974 - 0.14 12.2 7.5 0.73 9.9 4.1 2.8 2 2 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1451 PF07295.11 ORF67974 - 0.18 11.9 13.8 0.12 12.4 2.0 2.6 1 1 0 2 2 2 0 Zinc-ribbon containing domain Acetyltransf_11 PF13720.6 ORF67974 - 0.93 10.0 4.7 21 5.7 0.5 3.0 2 1 1 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FTO_CTD PF12934.7 ORF67974 - 1.3 8.8 12.9 0.3 10.8 3.1 3.0 2 2 1 3 3 3 0 FTO C-terminal domain DUF883 PF05957.13 ORF67974 - 1.6 9.4 4.6 2 9.1 0.4 2.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) PLA2G12 PF06951.11 ORF67974 - 4.7 7.1 5.7 11 5.8 0.4 2.7 2 2 1 3 3 3 0 Group XII secretory phospholipase A2 precursor (PLA2G12) Tropomyosin_1 PF12718.7 ORF67974 - 8.7 6.5 24.5 4.4 7.5 8.7 2.8 2 1 0 2 2 2 0 Tropomyosin like 2OG-FeII_Oxy_3 PF13640.6 ORF67874 - 0.038 14.9 0.0 0.072 14.0 0.0 1.5 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Hydrolase_4 PF12146.8 ORF67874 - 0.21 10.8 0.0 0.4 9.9 0.0 1.5 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Far-17a_AIG1 PF04750.14 ORF67655 - 4.9e-06 26.0 15.9 6.5e-06 25.6 15.9 1.2 1 0 0 1 1 1 1 FAR-17a/AIG1-like protein Bap31_Bap29_C PF18035.1 ORF67655 - 0.0076 16.2 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 Bap31/Bap29 cytoplasmic coiled-coil domain ECH_1 PF00378.20 ORF64002 - 7.7e-23 81.1 0.0 8.6e-23 80.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF64002 - 1.1e-08 35.0 0.0 1.4e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase RQC PF09382.10 ORF6175 - 6.1e-36 122.7 0.0 1e-35 122.0 0.0 1.3 1 0 0 1 1 1 1 RQC domain HRDC PF00570.23 ORF6175 - 1.8e-24 85.5 0.1 8.6e-24 83.3 0.0 2.0 2 0 0 2 2 2 1 HRDC domain RecQ_Zn_bind PF16124.5 ORF6175 - 1.8e-10 41.4 0.9 3.5e-10 40.5 0.9 1.5 1 0 0 1 1 1 1 RecQ zinc-binding Helicase_Sgs1 PF11408.8 ORF6175 - 0.019 15.0 0.1 0.035 14.2 0.1 1.3 1 0 0 1 1 1 0 Sgs1 RecQ helicase zf-CXXC PF02008.20 ORF6175 - 0.043 13.8 0.3 0.096 12.7 0.3 1.5 1 0 0 1 1 1 0 CXXC zinc finger domain Methyltransf_11 PF08241.12 ORF60111 - 6.5e-14 52.3 0.0 1.1e-13 51.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF60111 - 6e-12 46.1 0.0 1.1e-11 45.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF60111 - 6.6e-11 42.2 0.0 1.1e-10 41.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF60111 - 3.8e-08 33.4 0.0 5.7e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF60111 - 4.4e-08 32.7 0.1 8.6e-08 31.8 0.1 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF60111 - 3.2e-05 24.6 0.0 5.2e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DUF1799 PF08809.11 ORF60111 - 0.038 14.2 0.0 0.085 13.1 0.0 1.6 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) Pox_MCEL PF03291.16 ORF60111 - 0.13 11.3 0.0 0.44 9.6 0.0 1.7 1 1 0 1 1 1 0 mRNA capping enzyme Thioredoxin_6 PF13848.6 ORF58867 - 3.3e-06 27.1 0.3 8.5e-06 25.8 0.2 1.7 1 1 1 2 2 2 1 Thioredoxin-like domain Ufd2P_core PF10408.9 ORF57201 - 5e-25 88.2 0.0 6e-25 87.9 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin elongating factor core U-box PF04564.15 ORF57201 - 2e-17 63.1 0.1 3.6e-17 62.3 0.1 1.4 1 0 0 1 1 1 1 U-box domain AAA_lid_5 PF17865.1 ORF57201 - 0.054 13.6 0.0 0.094 12.8 0.0 1.4 1 0 0 1 1 1 0 Midasin AAA lid domain TssR PF17643.1 ORF57201 - 0.087 10.8 0.1 0.091 10.7 0.1 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssR KLRAQ PF10205.9 ORF57201 - 0.097 12.9 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein Tim17 PF02466.19 ORF56143 - 0.047 14.1 0.2 0.08 13.3 0.2 1.4 1 1 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family VGPC1_C PF16799.5 ORF5443 - 0.0093 15.9 1.7 0.025 14.5 1.7 1.8 1 0 0 1 1 1 1 C-terminal membrane-localisation domain of ion-channel, VCN1 Peptidase_A3 PF02160.15 ORF5443 - 0.071 12.6 4.0 0.098 12.1 4.0 1.2 1 0 0 1 1 1 0 Cauliflower mosaic virus peptidase (A3) FDX-ACB PF03147.14 ORF5443 - 0.11 12.9 2.8 0.56 10.7 2.8 2.1 2 1 0 2 2 2 0 Ferredoxin-fold anticodon binding domain MAS20 PF02064.15 ORF5443 - 0.35 11.0 8.5 0.71 10.0 8.5 1.5 1 0 0 1 1 1 0 MAS20 protein import receptor TFIIA PF03153.13 ORF5443 - 0.45 10.4 16.5 0.56 10.2 16.5 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Exonuc_VII_L PF02601.15 ORF5443 - 1.3 8.5 9.8 1.7 8.1 9.8 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Ubiquitin_2 PF14560.6 ORF53784 - 5.2e-25 87.7 1.7 1.1e-24 86.6 0.1 2.1 2 0 0 2 2 2 1 Ubiquitin-like domain CAP_GLY PF01302.25 ORF53784 - 6.4e-18 64.5 0.0 1e-17 63.9 0.0 1.3 1 0 0 1 1 1 1 CAP-Gly domain ubiquitin PF00240.23 ORF53784 - 0.0024 17.6 0.9 0.22 11.3 0.1 3.4 3 1 0 3 3 3 1 Ubiquitin family T6_Ig_like PF18002.1 ORF53784 - 0.0042 17.0 0.1 0.0063 16.4 0.1 1.3 1 0 0 1 1 1 1 T6 antigen Ig like domain DUF3297 PF11730.8 ORF53784 - 0.037 13.9 0.1 0.09 12.7 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3297) VPS9 PF02204.18 ORF5161 - 6.4e-17 61.7 1.8 6.5e-17 61.6 0.3 1.8 2 0 0 2 2 2 1 Vacuolar sorting protein 9 (VPS9) domain TolA_bind_tri PF16331.5 ORF50529 - 2.2 8.4 7.0 0.23 11.6 2.2 1.9 2 0 0 2 2 2 0 TolA binding protein trimerisation MotA_ExbB PF01618.16 ORF49178 - 1.1e-33 115.6 2.3 1.3e-33 115.4 1.5 1.6 1 1 0 1 1 1 1 MotA/TolQ/ExbB proton channel family DUF3566 PF12089.8 ORF49178 - 0.1 12.9 6.1 0.1 13.0 2.6 2.2 2 0 0 2 2 2 0 Transmembrane domain of unknown function (DUF3566) Vpu PF00558.19 ORF49178 - 0.42 10.4 1.8 0.75 9.6 0.1 2.1 2 0 0 2 2 2 0 Vpu protein LapA_dom PF06305.11 ORF49178 - 0.51 10.2 4.0 0.32 10.8 0.5 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DASH_Dad2 PF08654.10 ORF48219 - 0.0021 18.5 0.9 0.0021 18.5 0.9 3.0 2 1 2 4 4 4 1 DASH complex subunit Dad2 DASH_Duo1 PF08651.10 ORF48219 - 0.027 14.2 6.7 0.3 10.9 0.1 3.5 3 1 0 3 3 3 0 DASH complex subunit Duo1 Apolipoprotein PF01442.18 ORF48219 - 0.072 13.0 8.6 0.55 10.1 1.0 2.6 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF48219 - 0.14 12.2 7.5 0.73 9.9 4.1 2.8 2 2 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1451 PF07295.11 ORF48219 - 0.18 11.9 13.8 0.12 12.4 2.0 2.6 1 1 0 2 2 2 0 Zinc-ribbon containing domain Acetyltransf_11 PF13720.6 ORF48219 - 0.93 10.0 4.7 21 5.7 0.5 3.0 2 1 1 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FTO_CTD PF12934.7 ORF48219 - 1.3 8.8 12.9 0.3 10.8 3.1 3.0 2 2 1 3 3 3 0 FTO C-terminal domain DUF883 PF05957.13 ORF48219 - 1.6 9.4 4.6 2 9.1 0.4 2.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) PLA2G12 PF06951.11 ORF48219 - 4.7 7.1 5.7 11 5.8 0.4 2.7 2 2 1 3 3 3 0 Group XII secretory phospholipase A2 precursor (PLA2G12) Tropomyosin_1 PF12718.7 ORF48219 - 8.7 6.5 24.5 4.4 7.5 8.7 2.8 2 1 0 2 2 2 0 Tropomyosin like CLAMP PF14769.6 ORF46470 - 2.7e-05 24.5 0.5 7.2e-05 23.2 0.2 1.9 1 1 1 2 2 2 1 Flagellar C1a complex subunit C1a-32 DUF4298 PF14131.6 ORF46470 - 0.59 10.1 3.7 2.3 8.2 0.6 3.1 3 1 0 3 3 3 0 Domain of unknown function (DUF4298) Tetraspanin PF00335.20 ORF44467 - 3.5e-12 46.5 2.6 6.3e-12 45.7 2.6 1.5 1 1 0 1 1 1 1 Tetraspanin family WW PF00397.26 ORF42912 - 1.9e-10 40.7 1.9 3.2e-10 39.9 1.9 1.4 1 0 0 1 1 1 1 WW domain COX3 PF00510.18 ORF4189 - 3.3e-18 66.4 22.7 4.1e-18 66.2 22.7 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III NAD_binding_1 PF00175.21 ORF4103 - 3.7e-15 56.5 0.0 6.3e-15 55.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_1 PF00667.20 ORF4103 - 2.4e-10 40.4 0.1 4.7e-10 39.4 0.0 1.5 2 0 0 2 2 2 1 FAD binding domain NAD_binding_6 PF08030.12 ORF4103 - 0.031 14.4 0.0 0.21 11.7 0.0 2.1 1 1 0 1 1 1 0 Ferric reductase NAD binding domain AAA_21 PF13304.6 ORF4103 - 0.15 11.9 1.9 0.13 12.0 0.2 1.7 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system RRM_1 PF00076.22 ORF39826 - 5.6e-15 54.9 0.0 3.5e-10 39.6 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF39826 - 0.01 15.4 0.0 0.038 13.6 0.0 1.9 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF39826 - 0.035 14.2 0.0 0.064 13.4 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif Atrophin-1 PF03154.15 ORF39826 - 0.21 9.9 8.9 0.26 9.6 8.9 1.1 1 0 0 1 1 1 0 Atrophin-1 family TFIIA PF03153.13 ORF39826 - 4.2 7.3 9.1 5.3 6.9 9.1 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit PAT1 PF09770.9 ORF39199 - 4 5.6 27.2 4.7 5.4 27.2 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 SOG2 PF10428.9 ORF39199 - 4.7 6.3 14.2 5.1 6.2 14.2 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein DUF3043 PF11241.8 ORF39199 - 6.9 6.7 9.1 14 5.6 9.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) VPS9 PF02204.18 ORF38891 - 6.4e-17 61.7 1.8 6.5e-17 61.6 0.3 1.8 2 0 0 2 2 2 1 Vacuolar sorting protein 9 (VPS9) domain LRR_9 PF14580.6 ORF38535 - 1.2e-14 54.2 3.0 4e-14 52.5 2.9 1.8 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 ORF38535 - 3.9e-10 39.8 11.9 1.7e-06 28.3 3.4 3.5 1 1 3 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF38535 - 1.5e-05 24.6 14.2 0.00083 19.1 5.4 3.4 3 1 1 4 4 4 2 Leucine rich repeat Peptidase_C26 PF07722.13 ORF36964 - 3.3e-09 36.8 0.0 9.1e-09 35.4 0.0 1.7 2 0 0 2 2 2 1 Peptidase C26 GATase PF00117.28 ORF36964 - 1.2e-07 31.7 0.0 2.1e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I NAD_binding_1 PF00175.21 ORF36462 - 3.7e-15 56.5 0.0 6.3e-15 55.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_1 PF00667.20 ORF36462 - 2.4e-10 40.4 0.1 4.7e-10 39.4 0.0 1.5 2 0 0 2 2 2 1 FAD binding domain NAD_binding_6 PF08030.12 ORF36462 - 0.031 14.4 0.0 0.21 11.7 0.0 2.1 1 1 0 1 1 1 0 Ferric reductase NAD binding domain AAA_21 PF13304.6 ORF36462 - 0.15 11.9 1.9 0.13 12.0 0.2 1.7 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Response_reg PF00072.24 ORF34025 - 3.5e-19 69.0 0.1 5e-19 68.5 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain CitT PF12431.8 ORF34025 - 0.031 14.6 0.2 0.062 13.7 0.2 1.5 1 0 0 1 1 1 0 Transcriptional regulator EcoRII-N PF09217.10 ORF34025 - 0.058 13.1 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 Restriction endonuclease EcoRII, N-terminal HTH_11 PF08279.12 ORF34025 - 0.088 12.8 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 HTH domain S1 PF00575.23 ORF33809 - 0.00025 21.3 0.4 0.0053 17.1 0.2 2.3 2 0 0 2 2 2 1 S1 RNA binding domain Sel1 PF08238.12 ORF33668 - 9.4e-13 48.4 7.0 2.2e-07 31.3 1.3 3.3 3 0 0 3 3 3 2 Sel1 repeat Armet PF10208.9 ORF33668 - 0.024 14.6 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding Apolipoprotein PF01442.18 ORF31813 - 6.9e-05 22.8 11.2 0.00019 21.3 10.7 1.6 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain PhaP_Bmeg PF09602.10 ORF31813 - 0.0011 19.0 4.6 0.0018 18.2 4.6 1.4 1 0 0 1 1 1 1 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) FAM184 PF15665.5 ORF31813 - 0.0046 16.8 9.4 0.0076 16.1 9.4 1.3 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B OmpH PF03938.14 ORF31813 - 0.0049 17.2 6.1 0.0079 16.5 6.1 1.3 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) AAA_13 PF13166.6 ORF31813 - 0.0072 15.0 2.8 0.009 14.7 2.8 1.1 1 0 0 1 1 1 1 AAA domain FliT PF05400.13 ORF31813 - 0.0079 17.0 9.0 0.017 15.9 9.0 1.6 1 0 0 1 1 1 1 Flagellar protein FliT FlxA PF14282.6 ORF31813 - 0.014 15.4 5.9 0.031 14.3 5.7 1.7 1 1 0 1 1 1 0 FlxA-like protein Baculo_PEP_C PF04513.12 ORF31813 - 0.015 15.3 2.5 0.052 13.6 2.4 1.7 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Zwint PF15556.6 ORF31813 - 0.036 13.6 5.9 0.052 13.0 5.9 1.2 1 0 0 1 1 1 0 ZW10 interactor DUF812 PF05667.11 ORF31813 - 0.038 12.9 7.1 0.053 12.4 7.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) ApoLp-III PF07464.11 ORF31813 - 0.038 14.1 2.9 0.078 13.1 2.2 1.6 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) PIN_8 PF18476.1 ORF31813 - 0.044 13.6 3.0 0.063 13.1 3.0 1.1 1 0 0 1 1 1 0 PIN like domain Histidinol_dh PF00815.20 ORF31813 - 0.047 12.7 1.0 0.061 12.3 1.0 1.2 1 0 0 1 1 1 0 Histidinol dehydrogenase DUF4455 PF14643.6 ORF31813 - 0.055 12.1 8.6 0.076 11.6 8.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4455) Sds3 PF08598.11 ORF31813 - 0.062 13.3 7.4 0.067 13.2 5.6 1.6 1 1 1 2 2 2 0 Sds3-like Syntaxin-6_N PF09177.11 ORF31813 - 0.071 13.7 6.2 0.048 14.2 3.1 2.0 1 1 1 2 2 2 0 Syntaxin 6, N-terminal RE_AlwI PF09491.10 ORF31813 - 0.076 11.8 1.2 0.1 11.4 1.2 1.1 1 0 0 1 1 1 0 AlwI restriction endonuclease YkyA PF10368.9 ORF31813 - 0.089 12.5 7.8 0.17 11.6 7.8 1.4 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein RICH PF05062.12 ORF31813 - 0.095 13.1 5.0 0.71 10.3 0.3 2.6 1 1 1 2 2 2 0 RICH domain CobN-Mg_chel PF02514.16 ORF31813 - 0.096 10.4 1.2 0.095 10.4 1.2 1.1 1 0 0 1 1 1 0 CobN/Magnesium Chelatase PDCD2_C PF04194.13 ORF31813 - 0.097 12.7 1.1 0.17 12.0 1.1 1.4 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain Exonuc_VII_L PF02601.15 ORF31813 - 0.097 12.2 2.6 0.13 11.9 2.6 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF445 PF04286.12 ORF31813 - 0.1 12.4 3.4 0.14 11.9 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) PMC2NT PF08066.12 ORF31813 - 0.15 12.8 2.6 0.26 12.0 2.1 1.7 1 1 0 1 1 1 0 PMC2NT (NUC016) domain YtxH PF12732.7 ORF31813 - 0.17 12.4 3.2 2 9.0 0.1 2.9 1 1 1 2 2 2 0 YtxH-like protein FUSC PF04632.12 ORF31813 - 0.17 10.4 0.7 0.2 10.1 0.7 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF1319 PF07028.11 ORF31813 - 0.18 12.0 5.4 0.29 11.3 5.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1319) Prominin PF05478.11 ORF31813 - 0.18 9.7 2.6 0.24 9.3 2.6 1.1 1 0 0 1 1 1 0 Prominin TBCA PF02970.16 ORF31813 - 0.2 12.0 10.6 0.47 10.8 1.5 2.8 1 1 2 3 3 3 0 Tubulin binding cofactor A DUF2252 PF10009.9 ORF31813 - 0.2 10.7 3.9 0.31 10.1 3.9 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) Tht1 PF04163.12 ORF31813 - 0.22 10.2 3.0 0.75 8.5 2.4 1.8 1 1 1 2 2 2 0 Tht1-like nuclear fusion protein Mis12 PF05859.12 ORF31813 - 0.28 11.2 4.4 0.45 10.6 3.5 1.6 1 1 0 1 1 1 0 Mis12 protein DUF1664 PF07889.12 ORF31813 - 0.31 11.1 8.5 1.3 9.1 5.3 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Halogen_Hydrol PF10112.9 ORF31813 - 0.37 10.8 7.7 0.44 10.5 1.2 2.1 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein BshC PF10079.9 ORF31813 - 0.38 9.4 5.9 0.5 9.0 5.9 1.1 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC GlutR_dimer PF00745.20 ORF31813 - 0.38 11.2 5.4 0.54 10.7 3.8 1.9 1 1 1 2 2 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain Cep57_MT_bd PF06657.13 ORF31813 - 0.4 11.2 14.0 2.8 8.5 4.3 2.5 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 DUF1640 PF07798.11 ORF31813 - 0.4 10.7 10.2 1.4 9.0 10.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) TMPIT PF07851.13 ORF31813 - 1.2 8.3 4.9 1.7 7.8 4.9 1.2 1 0 0 1 1 1 0 TMPIT-like protein KxDL PF10241.9 ORF31813 - 2.2 8.6 8.8 11 6.4 3.0 3.0 2 1 1 3 3 2 0 Uncharacterized conserved protein Fib_alpha PF08702.10 ORF31813 - 2.5 8.3 8.0 5.1 7.3 8.0 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family YabA PF06156.13 ORF31813 - 4 8.1 10.8 91 3.8 10.8 2.3 1 1 0 1 1 1 0 Initiation control protein YabA Fzo_mitofusin PF04799.13 ORF31813 - 5.4 6.6 7.7 3.7 7.1 5.2 1.8 1 1 1 2 2 2 0 fzo-like conserved region Synaptobrevin PF00957.21 ORF31813 - 9.2 6.1 7.1 30 4.5 0.6 3.2 3 1 1 4 4 3 0 Synaptobrevin 14-3-3 PF00244.20 ORF31600 - 5.6e-71 238.6 11.7 6.4e-71 238.4 11.7 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_12 PF13424.6 ORF31600 - 0.093 13.0 3.0 0.52 10.6 0.2 3.2 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF31600 - 0.15 13.0 1.3 16 6.6 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat GARP PF16731.5 ORF31600 - 0.23 11.1 6.4 0.22 11.2 3.6 2.2 2 1 0 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma LMBR1 PF04791.16 ORF31600 - 0.33 9.8 1.3 0.41 9.5 0.9 1.3 1 1 0 1 1 1 0 LMBR1-like membrane protein DUF4363 PF14276.6 ORF31600 - 1.1 9.4 9.5 6.5 6.9 0.4 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4363) DUF1890 PF09001.11 ORF31600 - 1.7 9.1 4.6 6.1 7.2 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF1890) Band_7 PF01145.25 ORF29484 - 9.7e-08 32.2 0.3 9.7e-08 32.2 0.3 1.9 2 0 0 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 ORF29484 - 2.9e-07 30.4 0.0 5.6e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of band_7 Band_7_1 PF13421.6 ORF29484 - 0.0004 20.2 0.7 0.0079 15.9 0.0 2.1 2 0 0 2 2 2 1 SPFH domain-Band 7 family DUF3598 PF12204.8 ORF29484 - 0.02 14.4 0.1 0.037 13.5 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3598) BicD PF09730.9 ORF27754 - 0.002 16.6 1.7 0.002 16.6 1.7 1.4 2 0 0 2 2 2 1 Microtubule-associated protein Bicaudal-D TPR_MLP1_2 PF07926.12 ORF27754 - 0.021 14.9 5.8 0.021 14.9 5.8 2.8 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein KASH_CCD PF14662.6 ORF27754 - 0.05 13.4 11.8 0.11 12.3 11.8 1.5 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DUF4012 PF13196.6 ORF27754 - 0.059 13.8 0.1 0.14 12.6 0.0 1.6 2 0 0 2 2 1 0 Protein of unknown function (DUF4012) THOC7 PF05615.13 ORF27754 - 0.074 13.3 14.8 4.6 7.5 4.8 2.4 1 1 1 2 2 2 0 Tho complex subunit 7 YabA PF06156.13 ORF27754 - 0.098 13.3 2.2 0.22 12.2 2.1 1.7 2 0 0 2 2 1 0 Initiation control protein YabA FapA PF03961.13 ORF27754 - 0.12 10.9 1.3 0.15 10.6 1.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Nucleo_P87 PF07267.11 ORF27754 - 0.16 10.8 5.0 0.18 10.6 5.0 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 CASP_C PF08172.12 ORF27754 - 0.24 10.7 4.5 0.18 11.1 2.6 1.6 1 1 1 2 2 2 0 CASP C terminal MAD PF05557.13 ORF27754 - 0.3 9.4 11.5 0.35 9.2 9.9 1.7 2 0 0 2 2 2 0 Mitotic checkpoint protein UPF0242 PF06785.11 ORF27754 - 0.73 9.9 5.6 1.1 9.3 5.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3450 PF11932.8 ORF27754 - 0.75 9.1 8.9 0.36 10.1 6.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Prefoldin_2 PF01920.20 ORF27754 - 2.5 8.1 8.7 0.35 10.9 1.3 2.7 3 0 0 3 3 3 0 Prefoldin subunit TipAS PF07739.13 ORF27754 - 3.8 8.1 12.5 11 6.6 0.3 2.3 1 1 1 2 2 2 0 TipAS antibiotic-recognition domain FUSC PF04632.12 ORF27754 - 3.8 5.9 5.2 5.6 5.4 5.2 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family End3 PF12761.7 ORF27754 - 6.6 6.8 13.1 3.2 7.9 0.5 2.4 1 1 2 3 3 3 0 Actin cytoskeleton-regulatory complex protein END3 Rbsn PF11464.8 ORF27754 - 7.1 6.5 9.4 0.44 10.3 3.0 2.3 3 0 0 3 3 3 0 Rabenosyn Rab binding domain Nas2_N PF18265.1 ORF27754 - 8.3 6.4 8.4 18 5.3 0.8 3.4 3 1 1 4 4 4 0 Nas2 N_terminal domain ZapB PF06005.12 ORF27754 - 8.5 6.9 16.9 2.8e+02 2.0 15.5 2.6 2 1 0 2 2 2 0 Cell division protein ZapB DUF218 PF02698.17 ORF22192 - 6.9e-18 64.9 0.0 8.9e-18 64.6 0.0 1.1 1 0 0 1 1 1 1 DUF218 domain DUF4116 PF13475.6 ORF21747 - 2e-34 117.0 0.0 2.2e-13 49.7 0.0 4.3 2 1 1 4 4 4 4 Domain of unknown function (DUF4116) Bep_C_terminal PF17841.1 ORF21747 - 0.0085 16.3 0.1 0.04 14.1 0.0 2.0 2 0 0 2 2 2 1 BID domain of Bartonella effector protein (Bep) DAG_kinase_N PF14513.6 ORF21333 - 0.1 12.8 0.9 0.15 12.2 0.9 1.2 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus DUF4064 PF13273.6 ORF2034 - 1.3 9.3 8.0 0.45 10.8 2.0 2.8 1 1 1 3 3 3 0 Protein of unknown function (DUF4064) CSD PF00313.22 ORF19781 - 4.5e-09 36.0 0.2 9.8e-09 35.0 0.2 1.6 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF19781 - 2.3e-05 24.0 1.8 3e-05 23.6 0.1 2.0 2 0 0 2 2 2 1 Ribonuclease B OB domain Forkhead_N PF08430.12 ORF19781 - 0.31 11.7 4.5 0.53 10.9 4.5 1.4 1 0 0 1 1 1 0 Forkhead N-terminal region Keratin_2_head PF16208.5 ORF19781 - 0.36 10.9 17.3 0.59 10.3 17.3 1.3 1 0 0 1 1 1 0 Keratin type II head Tetraspanin PF00335.20 ORF19224 - 3.5e-12 46.5 2.6 6.3e-12 45.7 2.6 1.5 1 1 0 1 1 1 1 Tetraspanin family RRM_1 PF00076.22 ORF18398 - 6.7e-15 54.7 0.0 1.6e-08 34.2 0.0 2.8 3 1 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF18398 - 5.2e-06 26.1 0.0 0.0088 15.6 0.0 2.1 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF18398 - 0.014 15.4 0.0 0.47 10.5 0.0 2.2 2 0 0 2 2 2 0 RNA binding motif RRM_7 PF16367.5 ORF18398 - 0.11 12.6 0.0 22 5.3 0.0 2.7 3 0 0 3 3 3 0 RNA recognition motif zf-LITAF-like PF10601.9 ORF17345 - 3.2e-08 33.7 13.0 4.1e-08 33.4 13.0 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain TssN PF17555.2 ORF14875 - 0.71 9.2 6.4 0.35 10.2 0.8 2.3 3 0 0 3 3 3 0 Type VI secretion system, TssN Synaptonemal_3 PF15191.6 ORF14658 - 0.12 12.1 0.1 0.24 11.2 0.1 1.4 1 0 0 1 1 1 0 Synaptonemal complex central element protein 3 PARP PF00644.20 ORF1389 - 6.1e-19 68.4 0.0 1.2e-17 64.2 0.0 2.1 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain 14-3-3 PF00244.20 ORF13165 - 4.9e-69 232.2 14.3 5.6e-69 232.0 14.3 1.0 1 0 0 1 1 1 1 14-3-3 protein LMBR1 PF04791.16 ORF13165 - 0.55 9.1 2.5 0.43 9.4 1.3 1.4 1 1 0 1 1 1 0 LMBR1-like membrane protein DUF1836 PF08876.11 ORF12090 - 8.1 6.5 9.8 0.11 12.6 0.8 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF1836) YqaH PF17448.2 ORF111823 - 0.012 15.9 0.0 0.029 14.7 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized YqaH-like EccE PF11203.8 ORF110099 - 0.0028 18.0 0.2 0.01 16.1 0.0 2.0 2 1 0 2 2 2 1 Putative type VII ESX secretion system translocon, EccE ADK PF00406.22 ORF109829 - 3.8e-47 160.2 0.0 4.7e-47 159.9 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF109829 - 6.1e-22 78.5 0.4 8.4e-22 78.1 0.0 1.4 2 0 0 2 2 2 1 AAA domain ADK_lid PF05191.14 ORF109829 - 3.3e-16 59.0 0.0 5.6e-16 58.2 0.0 1.4 1 0 0 1 1 1 1 Adenylate kinase, active site lid AAA_18 PF13238.6 ORF109829 - 3.1e-05 24.5 0.0 6.3e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 ORF109829 - 0.0034 17.2 0.0 0.0055 16.5 0.0 1.4 1 0 0 1 1 1 1 Cytidylate kinase Zeta_toxin PF06414.12 ORF109829 - 0.05 12.9 0.0 0.094 12.0 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.6 ORF109829 - 0.054 13.6 0.0 0.12 12.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF109829 - 0.075 13.4 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA PF00004.29 ORF109829 - 0.11 12.9 0.0 0.16 12.4 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 ORF109829 - 0.15 11.9 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain CadC_C1 PF18500.1 ORF107666 - 5.1e-22 78.5 0.1 7.8e-22 77.8 0.1 1.3 1 0 0 1 1 1 1 CadC C-terminal domain 1 TPR_2 PF07719.17 ORF107666 - 0.0061 16.6 0.3 0.062 13.4 0.1 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat Mob1_phocein PF03637.17 ORF106625 - 1.6e-63 213.8 0.1 1.9e-63 213.5 0.1 1.1 1 0 0 1 1 1 1 Mob1/phocein family EF-hand_1 PF00036.32 ORF104912 - 6.7e-22 75.4 2.4 6.7e-07 28.4 0.1 3.8 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF104912 - 4.1e-21 73.1 1.1 5.8e-06 25.8 0.0 4.2 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF104912 - 7.7e-18 64.7 0.6 1.8e-10 41.1 0.5 2.6 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF104912 - 1.2e-16 59.3 4.4 1e-05 24.8 0.1 3.5 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF104912 - 2e-08 34.0 0.9 0.028 14.3 0.0 3.5 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF104912 - 0.00096 19.4 0.0 3 8.3 0.0 2.9 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF104912 - 0.0013 19.0 0.1 1.3 9.4 0.1 2.3 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF104912 - 0.016 15.1 0.4 0.36 10.8 0.3 2.6 1 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand NMN_transporter PF04973.12 ORF104858 - 1.9e-50 171.3 26.8 2.9e-50 170.7 26.8 1.3 1 0 0 1 1 1 1 Nicotinamide mononucleotide transporter SurA_N_3 PF13624.6 ORF104858 - 0.33 10.7 2.8 0.7 9.7 2.8 1.6 1 0 0 1 1 1 0 SurA N-terminal domain LON_substr_bdg PF02190.16 ORF104715 - 0.042 13.7 0.2 0.082 12.8 0.2 1.5 1 1 0 1 1 1 0 ATP-dependent protease La (LON) substrate-binding domain DUF3492 PF11997.8 ORF104715 - 0.079 12.7 0.0 0.14 11.9 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3492) ASL_C PF08328.11 ORF102796 - 0.056 13.5 0.0 0.13 12.4 0.0 1.6 1 1 0 1 1 1 0 Adenylosuccinate lyase C-terminal adh_short PF00106.25 ORF102334 - 3.4e-20 72.3 0.0 4.5e-20 71.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF102334 - 2.2e-10 40.5 0.0 3e-10 40.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase ThiF PF00899.21 ORF102334 - 0.11 11.8 0.2 0.34 10.2 0.1 1.5 1 1 0 2 2 2 0 ThiF family CTC1_2 PF15491.6 NODE_30556_length_712_cov_147.196455_g24160_i0forward_frame_1 - 0.042 13.1 1.3 0.057 12.7 1.3 1.1 1 0 0 1 1 1 0 CST, telomere maintenance, complex subunit CTC1 HK_sensor PF16750.5 NODE_30531_length_713_cov_2.564897_g24138_i0forward_frame_1 - 0.009 16.3 0.0 0.021 15.1 0.0 1.6 1 0 0 1 1 1 1 Sensor domain of 2-component histidine kinase Helicase_C PF00271.31 NODE_30529_length_713_cov_3.513274_g24136_i0forward_frame_1 - 5.5e-18 65.3 0.0 9.2e-18 64.6 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 NODE_30529_length_713_cov_3.513274_g24136_i0forward_frame_1 - 0.23 10.6 0.0 0.33 10.1 0.0 1.1 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase MORN PF02493.20 NODE_30523_length_713_cov_55.095870_g24130_i0reverse_frame_1 - 0.001 18.9 0.3 0.037 13.9 0.0 2.9 2 0 0 2 2 2 1 MORN repeat RCC1_2 PF13540.6 NODE_30505_length_713_cov_215.876106_g19909_i1reverse_frame_1 - 4.1e-11 42.4 6.6 0.00018 21.2 0.0 4.4 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat FtsQ PF03799.15 NODE_30505_length_713_cov_215.876106_g19909_i1reverse_frame_1 - 0.00033 21.5 0.1 7.2 7.5 0.0 3.3 1 1 2 3 3 3 2 Cell division protein FtsQ Glyco_hydro_88 PF07470.13 NODE_30505_length_713_cov_215.876106_g19909_i1reverse_frame_1 - 0.072 12.2 0.5 6.1 5.8 0.0 2.8 3 0 0 3 3 3 0 Glycosyl Hydrolase Family 88 Mid1 PF12929.7 NODE_30502_length_713_cov_257.765487_g24111_i0reverse_frame_1 - 0.027 13.7 0.2 0.033 13.4 0.2 1.2 1 0 0 1 1 1 0 Stretch-activated Ca2+-permeable channel component VitK2_biosynth PF02621.14 NODE_30502_length_713_cov_257.765487_g24111_i0forward_frame_1 - 0.049 13.1 0.0 0.12 11.9 0.0 1.6 1 1 0 1 1 1 0 Menaquinone biosynthesis Ribosomal_S8 PF00410.19 NODE_30487_length_713_cov_1247.746313_g23480_i1forward_frame_1 - 0.14 12.1 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S8 Trypan_PARP PF05887.11 NODE_30472_length_714_cov_3.951399_g24091_i0reverse_frame_1 - 0.008 16.2 5.4 0.013 15.4 5.4 1.3 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) LepB_GAP_N PF18172.1 NODE_30466_length_714_cov_89.674521_g24086_i0reverse_frame_1 - 0.22 11.4 2.6 0.29 11.0 0.5 1.9 2 0 0 2 2 2 0 LepB GAP domain N-terminal subdomain DUF1980 PF09323.10 NODE_30390_length_715_cov_758.200000_g24024_i0reverse_frame_3 - 0.0064 16.4 1.8 0.0064 16.4 1.8 1.6 1 1 1 2 2 2 1 Domain of unknown function (DUF1980) PBP1_TM PF14812.6 NODE_30390_length_715_cov_758.200000_g24024_i0reverse_frame_3 - 0.013 15.9 1.9 0.018 15.4 0.4 1.9 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal SARAF PF06682.12 NODE_30390_length_715_cov_758.200000_g24024_i0reverse_frame_3 - 0.038 13.6 0.0 0.045 13.4 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Orf78 PF06024.12 NODE_30390_length_715_cov_758.200000_g24024_i0reverse_frame_3 - 0.092 13.0 0.4 0.092 13.0 0.4 1.7 2 0 0 2 2 2 0 Orf78 (ac78) DiSB-ORF2_chro PF16506.5 NODE_30390_length_715_cov_758.200000_g24024_i0forward_frame_2 - 0.25 11.4 3.6 0.27 11.3 0.1 2.6 3 0 0 3 3 3 0 Putative virion glycoprotein of insect viruses Glyco_hydro_1 PF00232.18 NODE_30383_length_716_cov_3.888399_g24018_i0forward_frame_2 - 7.4e-50 169.7 0.5 8.7e-50 169.4 0.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 GHD PF17834.1 NODE_30381_length_716_cov_19.881057_g24016_i0forward_frame_3 - 0.1 12.6 0.4 0.18 11.9 0.4 1.4 1 0 0 1 1 1 0 Beta-sandwich domain in beta galactosidase Spc7_N PF15402.6 NODE_30381_length_716_cov_19.881057_g24016_i0forward_frame_2 - 2 6.6 6.2 2.3 6.4 6.2 1.1 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 B277 PF17623.2 NODE_30375_length_716_cov_95.005874_g24010_i0reverse_frame_2 - 0.043 12.9 17.6 0.55 9.3 1.7 3.1 2 1 1 3 3 3 0 Domain of unknown function DUF3481 PF11980.8 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_3 - 0.053 13.2 0.9 1.5 8.6 0.2 2.6 3 0 0 3 3 3 0 C-terminal domain of neuropilin glycoprotein RCC1_2 PF13540.6 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.00011 21.9 20.8 0.29 11.0 0.2 5.7 5 1 0 5 5 5 3 Regulator of chromosome condensation (RCC1) repeat DUF5540 PF17694.1 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.019 15.4 2.6 40 4.8 0.1 3.6 2 1 1 3 3 3 0 Family of unknown function (DUF5540) DUF155 PF02582.14 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.028 14.5 5.6 37 4.4 0.0 4.7 4 1 1 5 5 5 0 Uncharacterised ACR, YagE family COG1723 NOZZLE PF08744.10 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.078 12.5 2.1 0.12 11.8 1.6 1.4 1 1 0 1 1 1 0 Plant transcription factor NOZZLE UPF0180 PF03698.13 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.15 12.3 1.4 1.4 9.2 0.1 2.9 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0180) Aldolase_II PF00596.21 NODE_30352_length_716_cov_302.497797_g23987_i0forward_frame_3 - 0.012 15.5 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 Class II Aldolase and Adducin N-terminal domain AKNA PF12443.8 NODE_30340_length_717_cov_1.862170_g23979_i0forward_frame_2 - 0.04 14.6 1.4 0.22 12.2 0.6 2.3 2 0 0 2 2 2 0 AT-hook-containing transcription factor DivIC PF04977.15 NODE_30340_length_717_cov_1.862170_g23979_i0forward_frame_2 - 0.38 10.5 5.1 2 8.2 2.7 2.6 2 0 0 2 2 2 0 Septum formation initiator FlaC_arch PF05377.11 NODE_30340_length_717_cov_1.862170_g23979_i0forward_frame_2 - 0.44 11.0 4.9 3.5 8.1 0.7 2.8 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) APG6_N PF17675.1 NODE_30340_length_717_cov_1.862170_g23979_i0forward_frame_2 - 1 9.9 11.2 0.12 12.9 3.8 2.5 2 1 0 2 2 2 0 Apg6 coiled-coil region XhlA PF10779.9 NODE_30340_length_717_cov_1.862170_g23979_i0forward_frame_2 - 1.1 9.5 7.8 0.31 11.3 2.8 2.6 2 1 0 2 2 2 0 Haemolysin XhlA E2F_CC-MB PF16421.5 NODE_30340_length_717_cov_1.862170_g23979_i0forward_frame_2 - 2.2 8.7 6.9 3.1 8.2 1.7 2.7 2 1 0 2 2 2 0 E2F transcription factor CC-MB domain SOGA PF11365.8 NODE_30340_length_717_cov_1.862170_g23979_i0forward_frame_2 - 2.3 9.4 8.4 0.6 11.3 1.5 2.6 2 1 0 2 2 2 0 Protein SOGA GWT1 PF06423.12 NODE_30298_length_717_cov_581.538123_g23939_i0reverse_frame_2 - 0.19 11.9 4.4 0.34 11.0 4.0 1.8 1 1 0 1 1 1 0 GWT1 TPR_12 PF13424.6 NODE_30293_length_717_cov_22632.322581_g23936_i0reverse_frame_2 - 0.00096 19.4 0.0 0.049 13.9 0.0 1.9 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_30293_length_717_cov_22632.322581_g23936_i0reverse_frame_2 - 0.0026 17.8 0.0 0.063 13.4 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat Sec63 PF02889.16 ORF99769 - 9.8e-08 31.5 0.4 1.3e-07 31.0 0.4 1.2 1 0 0 1 1 1 1 Sec63 Brl domain adh_short PF00106.25 ORF974 - 7.5e-35 120.2 0.1 1.6e-34 119.1 0.0 1.5 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF974 - 6.7e-24 84.7 0.1 9.1e-24 84.3 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF974 - 1.9e-08 34.4 0.0 2e-07 31.1 0.0 1.9 2 0 0 2 2 2 1 KR domain DUF4916 PF16262.5 ORF974 - 0.04 13.4 0.0 0.068 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) DUF1449 PF07290.11 ORF95427 - 0.59 9.7 4.7 2.2 7.9 4.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1449) TMEM154 PF15102.6 ORF95427 - 1 9.2 6.4 0.17 11.8 2.2 1.8 2 0 0 2 2 2 0 TMEM154 protein family Baculo_11_kDa PF06143.11 ORF95427 - 7 6.3 11.8 1.2 8.8 0.7 3.2 3 0 0 3 3 3 0 Baculovirus 11 kDa family KAR9 PF08580.10 ORF9490 - 0.063 11.8 0.1 0.08 11.5 0.1 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 RED_C PF07807.11 ORF9260 - 0.052 14.0 0.8 0.052 14.0 0.8 2.2 1 1 1 2 2 2 0 RED-like protein C-terminal region Tubulin PF00091.25 ORF92270 - 0.14 12.3 0.1 0.2 11.8 0.1 1.2 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain MatE PF01554.18 ORF92253 - 0.00012 21.8 7.0 0.00012 21.8 7.0 1.6 1 1 0 1 1 1 1 MatE NAD_binding_1 PF00175.21 ORF92110 - 0.055 14.1 0.0 0.44 11.2 0.0 2.1 1 1 0 1 1 1 0 Oxidoreductase NAD-binding domain DUF1295 PF06966.12 ORF90087 - 1e-11 44.8 2.9 1e-11 44.8 2.9 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF90087 - 7.5e-07 29.2 5.1 2.3e-06 27.7 5.2 1.7 1 1 1 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 ORF90087 - 2.5e-06 27.8 0.2 2.5e-06 27.8 0.2 2.3 3 1 0 3 3 3 1 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF90087 - 0.0047 15.8 3.3 0.009 14.8 3.3 1.5 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family PHO4 PF01384.20 ORF90087 - 0.046 12.8 1.3 0.053 12.6 1.3 1.2 1 0 0 1 1 1 0 Phosphate transporter family SIR2 PF02146.17 ORF88910 - 1.5e-30 106.4 0.0 1.8e-30 106.1 0.0 1.1 1 0 0 1 1 1 1 Sir2 family DUF1449 PF07290.11 ORF88300 - 0.59 9.7 4.7 2.2 7.9 4.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1449) TMEM154 PF15102.6 ORF88300 - 1 9.2 6.4 0.17 11.8 2.2 1.8 2 0 0 2 2 2 0 TMEM154 protein family Baculo_11_kDa PF06143.11 ORF88300 - 7 6.3 11.8 1.2 8.8 0.7 3.2 3 0 0 3 3 3 0 Baculovirus 11 kDa family DUF4464 PF14713.6 ORF86657 - 3.2e-82 275.4 4.8 3.6e-82 275.3 4.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4464) MetJ PF01340.20 ORF82081 - 0.0067 16.4 0.1 0.04 13.9 0.0 2.0 2 0 0 2 2 2 1 Met Apo-repressor, MetJ Spore_III_AE PF09546.10 ORF82081 - 0.25 10.5 0.8 0.33 10.1 0.1 1.5 2 0 0 2 2 2 0 Stage III sporulation protein AE (spore_III_AE) DUF5611 PF18446.1 ORF82081 - 0.65 10.9 5.7 0.34 11.8 1.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF5611) DBP10CT PF08147.12 ORF81861 - 4.6e-12 46.0 5.1 4.6e-12 46.0 5.1 2.7 2 1 0 2 2 2 1 DBP10CT (NUC160) domain Linker_histone PF00538.19 ORF81782 - 1.2e-08 35.2 1.7 1.2e-08 35.2 1.7 2.7 2 1 1 3 3 3 1 linker histone H1 and H5 family DUF572 PF04502.13 ORF81782 - 2.3 7.8 30.9 3 7.4 30.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF572) Ndc1_Nup PF09531.10 ORF81782 - 4.9 5.7 18.1 5.8 5.5 18.1 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup TRAM_LAG1_CLN8 PF03798.16 ORF8027 - 3.8e-22 79.0 9.4 4.4e-22 78.8 9.4 1.0 1 0 0 1 1 1 1 TLC domain WD40 PF00400.32 ORF79403 - 1.1e-12 48.2 1.0 0.074 14.0 0.1 5.2 5 0 0 5 5 5 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF79403 - 3.5e-05 24.0 0.0 4.4 7.7 0.0 3.4 2 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Ank_4 PF13637.6 ORF77931 - 5.5e-07 30.0 0.2 3 8.5 0.0 4.5 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF77931 - 2.6e-06 27.9 0.0 0.38 11.4 0.0 3.4 3 1 0 3 3 3 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF77931 - 7.3e-06 25.9 0.2 3.8 8.4 0.0 4.6 5 0 0 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF77931 - 0.00026 21.2 1.3 0.45 10.9 0.0 3.8 3 1 0 3 3 3 2 Ankyrin repeats (many copies) zf-CCHC PF00098.23 ORF75265 - 0.00089 19.2 0.8 0.0021 18.0 0.8 1.6 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 ORF75265 - 0.0011 18.8 2.5 0.002 17.9 2.5 1.4 1 0 0 1 1 1 1 Zinc knuckle Methyltransf_29 PF03141.16 ORF74622 - 0.0003 19.5 1.7 1.7 7.1 0.0 3.7 3 1 0 3 3 3 3 Putative S-adenosyl-L-methionine-dependent methyltransferase Spectrin PF00435.21 ORF74622 - 0.012 16.1 0.0 60 4.2 0.0 3.8 4 0 0 4 4 4 0 Spectrin repeat RCC1_2 PF13540.6 ORF74622 - 0.29 11.0 11.6 8.6 6.3 0.7 4.5 5 0 0 5 5 5 0 Regulator of chromosome condensation (RCC1) repeat DUF2730 PF10805.8 ORF72943 - 0.0011 19.1 6.4 0.032 14.3 1.3 3.9 1 1 4 5 5 5 2 Protein of unknown function (DUF2730) Filament PF00038.21 ORF72943 - 0.01 15.4 9.4 2.4 7.7 0.0 2.5 1 1 1 2 2 2 0 Intermediate filament protein Phage_GP20 PF06810.11 ORF72943 - 0.015 15.1 10.0 0.27 11.0 5.1 2.7 2 1 0 2 2 2 0 Phage minor structural protein GP20 Nsp1_C PF05064.13 ORF72943 - 0.019 14.8 10.4 0.064 13.1 8.2 2.8 1 1 0 2 2 2 0 Nsp1-like C-terminal region She9_MDM33 PF05546.11 ORF72943 - 0.38 10.5 4.3 0.61 9.9 2.8 2.0 2 1 0 2 2 2 0 She9 / Mdm33 family Spc7 PF08317.11 ORF72943 - 0.42 9.5 10.5 1.2 7.9 8.2 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF4094 PF13334.6 ORF72943 - 1.2 9.6 4.5 18 5.9 0.0 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4094) CCDC-167 PF15188.6 ORF72943 - 1.4 9.3 4.1 3.4 8.1 0.8 2.9 2 1 1 3 3 3 0 Coiled-coil domain-containing protein 167 PriC PF07445.12 ORF72943 - 1.8 8.5 10.3 18 5.2 8.5 2.9 2 1 0 2 2 2 0 Primosomal replication protein priC Snapin_Pallidin PF14712.6 ORF72943 - 7.7 7.0 11.3 16 6.0 4.5 3.3 2 1 1 4 4 4 0 Snapin/Pallidin Seryl_tRNA_N PF02403.22 ORF72943 - 8.4 6.7 12.2 7.1 6.9 4.9 3.1 1 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain RhaA PF06134.11 ORF72263 - 1.9e-132 442.4 0.1 2.1e-132 442.2 0.1 1.0 1 0 0 1 1 1 1 L-rhamnose isomerase (RhaA) DUF3900 PF13039.6 ORF71888 - 0.016 15.1 0.5 0.026 14.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3900) Lipase_3 PF01764.25 ORF69709 - 0.00012 22.0 0.3 0.00091 19.1 0.2 2.1 1 1 1 2 2 2 1 Lipase (class 3) DUF2974 PF11187.8 ORF69709 - 0.00062 19.4 0.0 0.00083 19.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) UPF0227 PF05728.12 ORF69709 - 0.014 15.4 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) PGAP1 PF07819.13 ORF69709 - 0.024 14.4 0.0 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 PGAP1-like protein Peptidase_S9 PF00326.21 ORF69709 - 0.028 13.9 0.0 0.05 13.1 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF69709 - 0.09 13.4 2.7 0.076 13.6 1.7 1.5 1 1 0 1 1 1 0 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF69709 - 0.15 12.1 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Fibrillarin PF01269.17 ORF68625 - 1e-13 50.9 0.0 8.2e-09 34.9 0.0 2.1 2 0 0 2 2 2 2 Fibrillarin Melibiase_2 PF16499.5 ORF68423 - 8.6e-18 64.5 0.2 2.1e-17 63.2 0.2 1.6 1 1 0 1 1 1 1 Alpha galactosidase A Melibiase_C PF17801.1 ORF68423 - 3.5e-08 33.4 0.0 6.8e-08 32.5 0.0 1.4 1 0 0 1 1 1 1 Alpha galactosidase C-terminal beta sandwich domain DUF1774 PF08611.10 ORF67133 - 0.024 14.9 0.1 0.14 12.5 0.1 2.2 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF1774) Pyr_redox_2 PF07992.14 ORF66045 - 1.6e-15 57.1 0.0 2.2e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF66045 - 0.00094 18.5 0.0 0.041 13.1 0.0 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF66045 - 0.0026 17.4 1.2 0.6 9.6 0.2 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox PF00070.27 ORF66045 - 0.023 15.2 0.5 6.4 7.4 0.0 3.3 4 0 0 4 4 4 0 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 ORF66045 - 0.07 12.5 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 ThiF family PDZ_6 PF17820.1 ORF61339 - 9.4e-06 25.4 0.0 2.9e-05 23.8 0.0 1.9 1 0 0 1 1 1 1 PDZ domain zf-RanBP PF00641.18 ORF61339 - 0.00042 19.6 1.9 0.00076 18.7 1.9 1.4 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others PDZ PF00595.24 ORF61339 - 0.0069 16.7 0.0 0.014 15.8 0.0 1.4 1 0 0 1 1 1 1 PDZ domain DNA_RNApol_7kD PF03604.13 ORF61339 - 0.16 11.7 2.9 0.35 10.6 2.9 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.6 ORF61339 - 0.47 10.3 3.2 0.94 9.3 3.2 1.5 1 0 0 1 1 1 0 zinc-ribbon domain AMP-binding PF00501.28 ORF59396 - 4.3e-23 81.6 0.1 5.5e-23 81.2 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF59396 - 0.0014 19.5 0.0 0.0036 18.3 0.0 1.7 1 1 0 1 1 1 1 AMP-binding enzyme C-terminal domain PIP5K PF01504.18 ORF59021 - 9.3e-10 38.2 0.9 9.3e-10 38.2 0.9 2.1 1 1 0 2 2 2 1 Phosphatidylinositol-4-phosphate 5-Kinase BUD22 PF09073.10 ORF59021 - 0.021 14.2 12.2 0.029 13.7 12.2 1.2 1 0 0 1 1 1 0 BUD22 DUF4407 PF14362.6 ORF59021 - 0.21 10.9 3.5 0.28 10.5 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HAD_2 PF13419.6 ORF58284 - 1.9e-14 54.2 0.0 9.7e-14 51.8 0.0 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF58284 - 3.5e-11 43.8 0.0 4.5e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF58284 - 1.8e-08 34.3 0.0 3.7e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like SWIRM-assoc_3 PF16498.5 ORF58284 - 0.13 12.5 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 SWIRM-associated domain at the C-terminal SAICAR_synt PF01259.18 ORF57847 - 0.02 14.5 0.0 0.03 13.9 0.0 1.3 1 0 0 1 1 1 0 SAICAR synthetase ChpXY PF10216.9 ORF57847 - 0.056 12.6 1.2 4.2 6.4 0.4 2.1 1 1 1 2 2 2 0 CO2 hydration protein (ChpXY) SAICAR_synt PF01259.18 ORF57545 - 0.02 14.5 0.0 0.03 13.9 0.0 1.3 1 0 0 1 1 1 0 SAICAR synthetase ChpXY PF10216.9 ORF57545 - 0.056 12.6 1.2 4.2 6.4 0.4 2.1 1 1 1 2 2 2 0 CO2 hydration protein (ChpXY) FHA PF00498.26 ORF57538 - 3.1e-09 37.1 0.0 4.8e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF57538 - 0.0031 17.8 0.0 0.0057 16.9 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain SieB PF14163.6 ORF5632 - 0.036 13.5 0.1 0.075 12.5 0.1 1.4 1 0 0 1 1 1 0 Super-infection exclusion protein B RHH_7 PF16777.5 ORF5632 - 0.2 12.0 2.1 3.2 8.2 0.3 2.4 2 0 0 2 2 2 0 Transcriptional regulator, RHH-like, CopG Methyltransf_24 PF13578.6 ORF54869 - 0.0045 18.0 0.0 0.0074 17.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF54869 - 0.011 14.9 0.0 0.014 14.6 0.0 1.1 1 0 0 1 1 1 0 O-methyltransferase Scramblase PF03803.15 ORF54188 - 6.8e-10 38.6 0.5 1.3e-09 37.7 0.5 1.5 1 1 0 1 1 1 1 Scramblase YbaB_DNA_bd PF02575.16 ORF53820 - 1.3e-11 44.6 0.1 2e-11 43.9 0.1 1.3 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family Aida_N PF08910.10 ORF53820 - 0.028 14.8 0.1 0.05 14.0 0.1 1.5 1 1 0 1 1 1 0 Aida N-terminus FB_lectin PF07367.11 ORF53820 - 0.093 12.7 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Fungal fruit body lectin DUF4054 PF13262.6 ORF53820 - 0.097 12.7 5.7 2.7 8.1 1.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4054) PRK PF00485.18 ORF53101 - 2.7e-59 200.2 0.0 3.3e-59 200.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family HEAT PF02985.22 ORF47787 - 1.4e-14 52.9 2.2 9.7e-05 22.3 0.0 5.9 6 0 0 6 6 6 3 HEAT repeat HEAT_2 PF13646.6 ORF47787 - 3.7e-10 40.1 0.0 0.034 14.5 0.0 4.0 1 1 3 4 4 4 4 HEAT repeats Vac14_Fab1_bd PF12755.7 ORF47787 - 0.0016 19.0 0.2 4.1 8.1 0.0 3.4 2 2 1 4 4 4 2 Vacuolar 14 Fab1-binding region HEAT_EZ PF13513.6 ORF47787 - 0.094 13.3 0.1 0.64 10.6 0.0 2.4 3 0 0 3 3 3 0 HEAT-like repeat DUF5510 PF17629.2 ORF47787 - 0.13 12.2 2.1 7.9 6.5 0.3 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5510) EF-hand_5 PF13202.6 ORF46328 - 5.2e-11 41.5 1.7 0.00013 21.3 0.5 2.4 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 ORF46328 - 6.2e-09 34.8 0.7 0.0017 17.7 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF46328 - 7.8e-07 28.5 0.4 0.023 14.6 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF46328 - 5.1e-06 26.2 0.1 8e-06 25.6 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF46328 - 1.2e-05 25.6 0.1 2.7e-05 24.5 0.1 1.6 1 1 0 1 1 1 1 EF-hand domain pair Dockerin_1 PF00404.18 ORF46328 - 0.066 13.4 0.5 4.6 7.5 0.5 2.2 1 1 0 1 1 1 0 Dockerin type I domain DUF3332 PF11810.8 ORF46067 - 1.6 8.4 6.6 0.71 9.5 2.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3332) DUF1449 PF07290.11 ORF43628 - 0.59 9.7 4.7 2.2 7.9 4.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1449) TMEM154 PF15102.6 ORF43628 - 1 9.2 6.4 0.17 11.8 2.2 1.8 2 0 0 2 2 2 0 TMEM154 protein family Baculo_11_kDa PF06143.11 ORF43628 - 7 6.3 11.8 1.2 8.8 0.7 3.2 3 0 0 3 3 3 0 Baculovirus 11 kDa family Peptidase_C2 PF00648.21 ORF42268 - 2.6e-09 36.5 0.5 4.3e-09 35.8 0.5 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease CdiI_4 PF18624.1 ORF42268 - 0.026 15.0 1.7 0.13 12.7 1.2 2.3 2 0 0 2 2 2 0 CDI immunity protein DUF1923 PF09083.10 ORF42268 - 0.2 11.4 0.5 0.39 10.5 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1923) DUF2252 PF10009.9 ORF41153 - 0.24 10.4 0.6 0.33 10.0 0.6 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) Mem_trans PF03547.18 ORF41153 - 0.32 9.4 0.3 0.31 9.4 0.3 1.1 1 0 0 1 1 1 0 Membrane transport protein DUF5617 PF18493.1 ORF40221 - 0.00059 19.9 2.6 0.11 12.6 0.1 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF5617) Imm8 PF15586.6 ORF40221 - 0.065 13.3 0.4 0.065 13.3 0.4 1.7 2 0 0 2 2 2 0 Immunity protein 8 Pkinase PF00069.25 ORF3483 - 9.2e-26 90.8 0.0 1.7e-25 89.9 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF3483 - 1.5e-16 60.5 0.0 2.6e-16 59.7 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF3483 - 0.00025 20.5 0.0 0.00036 19.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Presenilin PF01080.17 ORF3483 - 7.8 5.1 6.3 9.8 4.8 6.3 1.1 1 0 0 1 1 1 0 Presenilin Kelch_4 PF13418.6 ORF32723 - 1.9e-10 40.5 2.5 0.0019 18.2 0.0 4.3 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF32723 - 5.9e-06 26.1 0.1 0.034 14.1 0.0 3.4 3 0 0 3 3 3 2 Kelch motif Kelch_6 PF13964.6 ORF32723 - 0.00041 20.5 0.2 0.016 15.5 0.1 3.1 3 0 0 3 3 3 1 Kelch motif Kelch_3 PF13415.6 ORF32723 - 0.0031 17.8 0.1 7.3 7.0 0.0 3.7 4 0 0 4 4 4 1 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF32723 - 0.012 15.5 0.6 0.22 11.5 0.0 3.2 3 1 1 4 4 4 0 Kelch motif RelA_SpoT PF04607.17 ORF32588 - 1.3e-27 96.4 0.0 2.1e-27 95.7 0.0 1.3 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins EF-hand_7 PF13499.6 ORF32588 - 1e-10 41.9 0.1 2.5e-10 40.7 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF32588 - 1.1e-10 41.2 0.3 3.8e-10 39.4 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF32588 - 8.9e-10 37.4 0.8 0.0014 18.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF32588 - 9e-10 37.7 0.1 0.00023 20.8 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF32588 - 2.2e-07 30.1 2.4 0.0055 16.1 0.1 2.3 2 0 0 2 2 2 2 EF hand LEA_6 PF10714.9 ORF32588 - 0.16 12.1 0.3 0.29 11.2 0.3 1.4 1 0 0 1 1 1 0 Late embryogenesis abundant protein 18 Gp-FAR-1 PF05823.12 ORF32303 - 0.0012 19.2 0.3 0.0022 18.4 0.3 1.4 1 0 0 1 1 1 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) ApoLp-III PF07464.11 ORF32303 - 0.02 15.0 3.4 1.5 8.9 0.3 2.2 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) UBN_AB PF14075.6 ORF32303 - 0.02 14.6 2.8 0.032 14.0 2.8 1.3 1 0 0 1 1 1 0 Ubinuclein conserved middle domain UPF0167 PF03691.14 ORF32303 - 0.05 13.4 0.1 0.092 12.5 0.1 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0167) Ribosomal_L37ae PF01780.19 ORF31133 - 0.48 10.5 4.5 0.18 11.9 1.5 1.9 2 0 0 2 2 2 0 Ribosomal L37ae protein family Med21 PF11221.8 ORF31133 - 0.76 10.0 16.8 1.8 8.8 16.8 1.7 1 1 0 1 1 1 0 Subunit 21 of Mediator complex ABC2_membrane PF01061.24 ORF29881 - 1.3e-39 135.8 17.5 1.8e-39 135.4 17.5 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF29881 - 2.3e-11 43.4 9.1 3.2e-11 42.9 9.1 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 ORF29881 - 0.024 13.9 2.6 0.059 12.7 2.6 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein PHO4 PF01384.20 ORF29881 - 0.092 11.8 1.3 0.12 11.4 1.3 1.3 1 0 0 1 1 1 0 Phosphate transporter family ACT_5 PF13710.6 ORF29177 - 0.027 14.3 1.8 2.6 8.0 0.1 3.2 2 1 0 2 2 2 0 ACT domain Yip1 PF04893.17 ORF28542 - 6.3e-10 39.0 11.5 9.5e-10 38.5 11.5 1.2 1 0 0 1 1 1 1 Yip1 domain Spermine_synth PF01564.17 ORF23881 - 1.5e-58 197.3 0.0 2.3e-58 196.7 0.0 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Methyltransf_25 PF13649.6 ORF23881 - 6.8e-07 29.9 0.0 1.1e-06 29.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF23881 - 3.8e-05 24.3 0.0 0.00013 22.7 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF23881 - 0.00038 21.0 0.1 0.00096 19.8 0.1 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF23881 - 0.028 13.6 0.0 0.04 13.1 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_31 PF13847.6 ORF23881 - 0.039 13.8 0.0 0.046 13.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_30 PF05430.11 ORF23881 - 0.057 13.3 0.0 0.15 11.9 0.0 1.7 2 0 0 2 2 2 0 S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_4 PF02390.17 ORF23881 - 0.077 12.5 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase SAICAR_synt PF01259.18 ORF23284 - 0.02 14.5 0.0 0.03 13.9 0.0 1.3 1 0 0 1 1 1 0 SAICAR synthetase ChpXY PF10216.9 ORF23284 - 0.056 12.6 1.2 4.2 6.4 0.4 2.1 1 1 1 2 2 2 0 CO2 hydration protein (ChpXY) Scytalone_dh PF02982.14 ORF23223 - 0.016 15.0 0.1 0.023 14.5 0.1 1.2 1 0 0 1 1 1 0 Scytalone dehydratase DUF4883 PF16224.5 ORF2119 - 0.027 14.7 0.0 0.063 13.5 0.0 1.6 1 0 0 1 1 1 0 DOmain of unknown function (DUF4883) KAR9 PF08580.10 ORF20638 - 0.063 11.8 0.1 0.08 11.5 0.1 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 ACT_5 PF13710.6 ORF17885 - 0.027 14.3 1.8 2.6 8.0 0.1 3.2 2 1 0 2 2 2 0 ACT domain GRAB PF10375.9 ORF16444 - 0.0073 16.1 0.7 0.018 14.9 0.7 1.7 1 0 0 1 1 1 1 GRIP-related Arf-binding domain MORN PF02493.20 ORF1382 - 2.2e-16 58.7 38.6 1.5e-05 24.6 0.5 6.2 6 0 0 6 6 6 5 MORN repeat DUF2610 PF11020.8 ORF1382 - 0.11 12.4 1.3 31 4.6 0.0 4.3 5 0 0 5 5 5 0 Domain of unknown function (DUF2610) Ntox27 PF15531.6 ORF1382 - 0.12 12.3 3.5 35 4.3 0.1 3.5 1 1 2 4 4 4 0 Bacterial toxin 27 DapH_N PF08503.10 ORF1382 - 0.14 12.4 1.0 0.85 9.9 0.1 2.7 2 1 0 2 2 2 0 Tetrahydrodipicolinate succinyltransferase N-terminal Ribosomal_S6e PF01092.19 ORF13288 - 3.6e-56 188.5 0.1 3.6e-56 188.5 0.1 1.7 2 1 0 2 2 2 1 Ribosomal protein S6e DUF2992 PF11208.8 ORF13288 - 0.11 12.7 15.0 0.21 11.8 15.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) Polo_box_2 PF18531.1 ORF13288 - 0.14 12.3 0.4 0.44 10.7 0.0 1.9 2 1 0 2 2 2 0 Polo box domain BTB PF00651.31 ORF111846 - 5.5e-13 49.1 0.1 7.9e-13 48.6 0.1 1.3 1 0 0 1 1 1 1 BTB/POZ domain Smoothelin PF12510.8 ORF111785 - 2.1e-05 24.5 1.8 3.3e-05 23.8 0.2 2.3 2 0 0 2 2 2 1 Smoothelin cytoskeleton protein Nop25 PF09805.9 ORF111785 - 3.3 8.2 27.7 9 6.8 13.0 2.8 1 1 1 2 2 2 0 Nucleolar protein 12 (25kDa) LMBR1 PF04791.16 ORF111785 - 9.7 5.0 11.7 11 4.7 11.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein AMP-binding PF00501.28 ORF111603 - 4.3e-23 81.6 0.1 5.5e-23 81.2 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF111603 - 0.0014 19.5 0.0 0.0036 18.3 0.0 1.7 1 1 0 1 1 1 1 AMP-binding enzyme C-terminal domain SH3_12 PF18129.1 ORF11139 - 4.4e-12 45.9 0.2 7e-12 45.3 0.2 1.3 1 0 0 1 1 1 1 Xrn1 SH3-like domain SH3_13 PF18335.1 ORF11139 - 0.022 14.6 0.6 0.061 13.2 0.0 1.9 2 0 0 2 2 2 0 ATP-dependent RecD-like DNA helicase SH3 domain KAR9 PF08580.10 ORF108247 - 0.063 11.8 0.1 0.08 11.5 0.1 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 DUF1449 PF07290.11 ORF107973 - 0.59 9.7 4.7 2.2 7.9 4.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1449) TMEM154 PF15102.6 ORF107973 - 1 9.2 6.4 0.17 11.8 2.2 1.8 2 0 0 2 2 2 0 TMEM154 protein family Baculo_11_kDa PF06143.11 ORF107973 - 7 6.3 11.8 1.2 8.8 0.7 3.2 3 0 0 3 3 3 0 Baculovirus 11 kDa family Kelch_4 PF13418.6 ORF105941 - 1.9e-10 40.5 2.5 0.0019 18.2 0.0 4.3 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF105941 - 5.9e-06 26.1 0.1 0.034 14.1 0.0 3.4 3 0 0 3 3 3 2 Kelch motif Kelch_6 PF13964.6 ORF105941 - 0.00041 20.5 0.2 0.016 15.5 0.1 3.1 3 0 0 3 3 3 1 Kelch motif Kelch_3 PF13415.6 ORF105941 - 0.0031 17.8 0.1 7.3 7.0 0.0 3.7 4 0 0 4 4 4 1 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF105941 - 0.012 15.5 0.6 0.22 11.5 0.0 3.2 3 1 1 4 4 4 0 Kelch motif MORN PF02493.20 ORF105598 - 2.2e-16 58.7 38.6 1.5e-05 24.6 0.5 6.2 6 0 0 6 6 6 5 MORN repeat DUF2610 PF11020.8 ORF105598 - 0.11 12.4 1.3 31 4.6 0.0 4.3 5 0 0 5 5 5 0 Domain of unknown function (DUF2610) Ntox27 PF15531.6 ORF105598 - 0.12 12.3 3.5 35 4.3 0.1 3.5 1 1 2 4 4 4 0 Bacterial toxin 27 DapH_N PF08503.10 ORF105598 - 0.14 12.4 1.0 0.85 9.9 0.1 2.7 2 1 0 2 2 2 0 Tetrahydrodipicolinate succinyltransferase N-terminal Cupin_8 PF13621.6 ORF100900 - 8.7e-28 97.7 0.0 9.3e-28 97.6 0.0 1.1 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF100900 - 8e-05 22.3 0.0 0.017 14.6 0.0 2.1 2 0 0 2 2 2 2 Cupin superfamily protein JmjC PF02373.22 ORF100900 - 0.19 12.2 0.0 0.48 10.9 0.0 1.7 2 0 0 2 2 2 0 JmjC domain, hydroxylase HSP70 PF00012.20 NODE_30647_length_710_cov_70.411852_g24240_i0forward_frame_1 - 6.4 4.8 22.3 8.2 4.5 22.3 1.2 1 0 0 1 1 1 0 Hsp70 protein AGTRAP PF06396.11 NODE_30646_length_710_cov_72.642963_g24239_i0reverse_frame_1 - 0.065 13.0 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) HTH_45 PF14947.6 NODE_30622_length_710_cov_446.245926_g24216_i0forward_frame_1 - 0.1 12.6 0.2 1.5 8.9 0.3 2.6 3 0 0 3 3 3 0 Winged helix-turn-helix Rdx PF10262.9 NODE_30537_length_712_cov_10564.621861_g21013_i8reverse_frame_3 - 5.6e-07 29.7 0.0 1.3e-06 28.5 0.0 1.6 1 0 0 1 1 1 1 Rdx family Rdx PF10262.9 NODE_30536_length_712_cov_10564.623338_g21013_i7reverse_frame_3 - 6e-07 29.6 0.0 1.3e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 Rdx family MFS_2 PF13347.6 NODE_30527_length_713_cov_3.836283_g24134_i0reverse_frame_2 - 3.3e-30 105.0 23.5 3.6e-30 104.9 23.5 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Tetraspanin PF00335.20 NODE_30527_length_713_cov_3.836283_g24134_i0reverse_frame_2 - 0.71 9.5 5.9 1.2 8.8 5.9 1.4 1 0 0 1 1 1 0 Tetraspanin family UPF0370 PF13980.6 NODE_30527_length_713_cov_3.836283_g24134_i0reverse_frame_2 - 2.5 8.2 5.2 3 7.9 3.0 2.3 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0370) SIS PF01380.22 NODE_30526_length_713_cov_4.069322_g24133_i0forward_frame_3 - 1.2e-32 112.5 0.1 1.6e-32 112.1 0.1 1.2 1 0 0 1 1 1 1 SIS domain HTH_6 PF01418.17 NODE_30526_length_713_cov_4.069322_g24133_i0forward_frame_3 - 3e-15 55.9 0.1 7.2e-15 54.7 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS_2 PF13580.6 NODE_30526_length_713_cov_4.069322_g24133_i0forward_frame_3 - 4.8e-08 33.1 0.9 6.5e-05 23.0 0.2 2.4 1 1 1 2 2 2 2 SIS domain BMC PF00936.19 NODE_30526_length_713_cov_4.069322_g24133_i0forward_frame_3 - 0.019 14.9 0.1 0.047 13.7 0.1 1.6 1 0 0 1 1 1 0 BMC domain IF3_N PF05198.16 NODE_30526_length_713_cov_4.069322_g24133_i0forward_frame_3 - 0.029 14.6 0.0 0.074 13.3 0.0 1.6 1 0 0 1 1 1 0 Translation initiation factor IF-3, N-terminal domain DUF2529 PF10740.9 NODE_30526_length_713_cov_4.069322_g24133_i0forward_frame_3 - 0.03 14.0 0.0 0.053 13.2 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF2529) TrkA_C PF02080.21 NODE_30526_length_713_cov_4.069322_g24133_i0forward_frame_3 - 0.15 11.9 0.0 0.36 10.7 0.0 1.7 1 1 0 1 1 1 0 TrkA-C domain APOBEC4_like PF18774.1 NODE_30517_length_713_cov_94.272861_g24124_i0forward_frame_3 - 0.023 14.6 0.5 0.038 13.9 0.5 1.4 1 0 0 1 1 1 0 APOBEC4-like -AID/APOBEC-deaminase Glyco_transf_92 PF01697.27 NODE_30505_length_713_cov_215.876106_g19909_i1forward_frame_2 - 2.5 7.7 7.7 0.68 9.5 0.6 2.5 1 1 1 2 2 2 0 Glycosyltransferase family 92 Ribosomal_L44 PF00935.19 NODE_30487_length_713_cov_1247.746313_g23480_i1reverse_frame_3 - 3.6e-26 91.5 12.6 3.6e-26 91.5 12.6 1.6 1 1 1 2 2 2 1 Ribosomal protein L44 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks77.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks77.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks77.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks77.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:14:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_C12 PF01088.21 NODE_30486_length_713_cov_1313.741888_g22291_i1reverse_frame_3 - 2.8e-48 164.5 0.0 3.2e-48 164.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 NEMP PF10225.9 NODE_30449_length_714_cov_221.536082_g23862_i1reverse_frame_3 - 0.028 14.1 0.1 0.047 13.4 0.1 1.4 1 0 0 1 1 1 0 NEMP family DUF3146 PF11344.8 NODE_30449_length_714_cov_221.536082_g23862_i1reverse_frame_3 - 0.032 13.9 0.2 0.054 13.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3146) TYW3 PF02676.14 NODE_30449_length_714_cov_221.536082_g23862_i1forward_frame_3 - 0.076 12.4 0.1 0.13 11.6 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase TYW3 Bac_DnaA_C PF08299.11 NODE_30428_length_714_cov_24938.530191_g23263_i15reverse_frame_2 - 0.065 13.3 0.0 0.17 11.9 0.0 1.7 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix DUF4296 PF14129.6 NODE_30427_length_714_cov_24938.530191_g23263_i14reverse_frame_2 - 0.0058 17.2 0.3 0.012 16.2 0.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4296) Bac_DnaA_C PF08299.11 NODE_30427_length_714_cov_24938.530191_g23263_i14reverse_frame_2 - 0.056 13.5 0.0 0.17 11.9 0.0 1.8 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix DUF4296 PF14129.6 NODE_30426_length_714_cov_24938.543446_g23263_i13reverse_frame_2 - 0.032 14.8 0.7 0.065 13.8 0.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4296) Bac_DnaA_C PF08299.11 NODE_30426_length_714_cov_24938.543446_g23263_i13reverse_frame_2 - 0.071 13.1 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix Abhydrolase_3 PF07859.13 ORF97574 - 5.4e-41 140.8 0.0 6.3e-41 140.6 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF97574 - 6.1e-10 38.5 0.0 1.2e-09 37.6 0.0 1.4 1 1 0 1 1 1 1 Steryl acetyl hydrolase Hydrolase_4 PF12146.8 ORF97574 - 0.00047 19.5 0.0 0.00065 19.0 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF97574 - 0.0064 16.1 0.0 0.012 15.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) Thioesterase PF00975.20 ORF97574 - 0.0096 16.1 0.0 0.015 15.4 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_6 PF12697.7 ORF97574 - 0.0096 16.5 0.1 0.011 16.3 0.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF97574 - 0.044 13.4 0.0 0.062 12.9 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Exo_endo_phos PF03372.23 ORF94530 - 4.7e-06 26.3 0.0 7.2e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Cpn60_TCP1 PF00118.24 ORF90880 - 9.7e-68 229.0 0.2 1.1e-67 228.8 0.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Zip PF02535.22 ORF87903 - 0.0069 15.7 0.3 0.0076 15.5 0.3 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter CobT PF06213.12 ORF87903 - 0.022 14.2 4.0 0.03 13.7 4.0 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Trypan_PARP PF05887.11 ORF87903 - 4.8 7.2 10.5 7.3 6.6 10.5 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) TerC PF03741.16 ORF87437 - 3.3e-52 176.8 15.2 4.4e-52 176.4 15.2 1.1 1 0 0 1 1 1 1 Integral membrane protein TerC family EF-hand_7 PF13499.6 ORF87128 - 1.7e-08 34.8 9.1 2.3e-06 27.9 4.6 2.1 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF87128 - 4.8e-07 29.2 7.6 0.00072 19.3 0.3 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF87128 - 2e-06 27.0 3.2 5.2e-06 25.7 0.4 2.6 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF87128 - 2.6e-05 23.4 7.7 3.2e-05 23.2 0.3 2.8 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF87128 - 0.0028 17.5 4.4 0.47 10.3 0.3 2.9 2 0 0 2 2 2 2 EF-hand domain pair SH3_16 PF18348.1 ORF87128 - 0.024 14.4 0.0 1.2 9.0 0.1 2.6 2 0 0 2 2 2 0 Bacterial dipeptidyl-peptidase Sh3 domain Peptidase_M23 PF01551.22 ORF86691 - 1.6e-31 108.4 2.1 2.1e-31 108.0 0.9 1.8 2 0 0 2 2 2 1 Peptidase family M23 LysM PF01476.20 ORF86691 - 3.2e-16 59.1 0.1 2.5e-15 56.2 0.0 2.3 2 0 0 2 2 2 1 LysM domain Biotin_lipoyl_2 PF13533.6 ORF86691 - 0.00023 20.9 0.0 0.044 13.6 0.0 2.4 2 0 0 2 2 2 2 Biotin-lipoyl like RnfC_N PF13375.6 ORF86691 - 0.0065 16.4 0.0 0.12 12.4 0.0 2.5 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain DPBB_1 PF03330.18 ORF86271 - 0.0059 16.9 0.1 0.014 15.6 0.1 1.7 1 1 0 1 1 1 1 Lytic transglycolase Barwin PF00967.17 ORF86271 - 0.0075 16.1 0.2 0.02 14.7 0.2 1.7 1 0 0 1 1 1 1 Barwin family Abhydro_lipase PF04083.16 ORF84092 - 3.2e-19 68.3 0.0 5.9e-19 67.4 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF84092 - 5e-07 29.6 0.1 6.4e-07 29.3 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF84092 - 0.027 13.7 0.0 0.034 13.4 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DPBB_1 PF03330.18 ORF83910 - 0.0059 16.9 0.1 0.014 15.6 0.1 1.7 1 1 0 1 1 1 1 Lytic transglycolase Barwin PF00967.17 ORF83910 - 0.0075 16.1 0.2 0.02 14.7 0.2 1.7 1 0 0 1 1 1 1 Barwin family VASP_tetra PF08776.11 ORF81797 - 0.28 10.8 4.1 0.65 9.6 4.1 1.6 1 0 0 1 1 1 0 VASP tetramerisation domain EFhand_Ca_insen PF08726.10 ORF81797 - 6.3 7.0 8.9 5 7.3 3.0 2.4 2 0 0 2 2 2 0 Ca2+ insensitive EF hand EF-hand_1 PF00036.32 ORF81344 - 0.00012 21.4 2.3 0.00012 21.4 2.3 2.0 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF81344 - 0.00014 21.6 1.0 0.00039 20.1 1.0 1.8 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF81344 - 0.00046 20.0 0.3 0.0014 18.4 0.3 1.9 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF81344 - 0.0014 19.0 1.8 0.0026 18.2 1.1 1.9 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF81344 - 0.018 14.5 3.0 0.018 14.5 3.0 2.0 2 0 0 2 2 2 0 EF hand Lipoprotein_20 PF13942.6 ORF80699 - 4.6e-77 257.9 7.7 5.6e-77 257.6 7.7 1.1 1 0 0 1 1 1 1 YfhG lipoprotein CCDC144C PF14915.6 ORF80699 - 0.0095 15.1 3.5 0.012 14.7 3.5 1.1 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region ZapA PF05164.13 ORF80699 - 0.057 13.9 2.0 0.7 10.4 0.0 2.3 2 0 0 2 2 2 0 Cell division protein ZapA KfrA_N PF11740.8 ORF80699 - 0.061 14.0 5.4 0.12 13.1 5.4 1.4 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term DUF5320 PF17253.2 ORF80699 - 0.37 11.9 1.3 0.8 10.8 1.3 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5320) SlyX PF04102.12 ORF80699 - 3.5 8.3 11.2 2.4 8.8 2.0 2.7 1 1 1 2 2 2 0 SlyX Se-cys_synth_N PF12390.8 ORF80666 - 0.14 12.4 4.4 3.4 8.0 0.0 3.3 3 0 0 3 3 3 0 Selenocysteine synthase N terminal GDA1_CD39 PF01150.17 ORF80530 - 2.9e-13 49.3 0.0 3.9e-12 45.5 0.0 2.1 1 1 0 1 1 1 1 GDA1/CD39 (nucleoside phosphatase) family DUF3995 PF13160.6 ORF80530 - 0.1 12.9 2.2 0.12 12.7 0.8 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3995) PMP22_Claudin PF00822.20 ORF80016 - 0.03 14.2 0.8 0.03 14.2 0.8 2.7 2 1 0 2 2 2 0 PMP-22/EMP/MP20/Claudin family Phage_holin_1 PF04531.13 ORF80016 - 0.19 12.3 14.5 0.77 10.3 2.0 3.1 2 1 1 3 3 3 0 Bacteriophage holin Claudin_2 PF13903.6 ORF80016 - 0.26 11.0 11.6 1.8 8.3 1.3 3.1 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction DUF202 PF02656.15 ORF80016 - 1.1 9.8 5.9 1.4 9.4 3.5 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF202) Spectrin_like PF18373.1 ORF75866 - 0.057 13.5 0.0 0.096 12.8 0.0 1.3 1 0 0 1 1 1 0 Spectrin like domain OmpA PF00691.20 ORF75522 - 0.002 18.4 0.0 0.0053 17.1 0.0 1.7 2 0 0 2 2 2 1 OmpA family PIH1_CS PF18201.1 ORF75522 - 0.0081 16.6 0.0 0.016 15.6 0.0 1.6 1 0 0 1 1 1 1 PIH1 CS-like domain Hydrolase_4 PF12146.8 ORF73932 - 1.5e-09 37.5 0.0 2.7e-09 36.7 0.0 1.3 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF73932 - 3.6e-09 37.6 1.7 4.3e-09 37.3 1.7 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF73932 - 9.6e-08 32.0 0.1 1.4e-07 31.4 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF73932 - 1.5e-06 28.5 0.0 1.7e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_3 PF07859.13 ORF73932 - 0.00046 20.1 0.0 0.00055 19.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold PGAP1 PF07819.13 ORF73932 - 0.021 14.6 0.0 0.038 13.7 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein Lipase_3 PF01764.25 ORF73932 - 0.022 14.6 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) CPT_N PF16484.5 ORF73932 - 0.1 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 Carnitine O-palmitoyltransferase N-terminus LIDHydrolase PF10230.9 ORF73932 - 0.23 11.0 0.0 0.27 10.7 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Cpn60_TCP1 PF00118.24 ORF67763 - 9.7e-68 229.0 0.2 1.1e-67 228.8 0.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PPR_2 PF13041.6 ORF66636 - 3.5e-20 71.9 0.0 5.8e-07 29.6 0.0 4.4 1 1 4 5 5 5 4 PPR repeat family PPR_3 PF13812.6 ORF66636 - 2.9e-16 59.3 0.0 2.8e-06 27.3 0.0 3.9 2 1 1 4 4 4 3 Pentatricopeptide repeat domain PPR PF01535.20 ORF66636 - 4.6e-16 57.9 0.9 0.0068 16.6 0.0 5.8 6 0 0 6 6 6 4 PPR repeat PPR_long PF17177.4 ORF66636 - 1.9e-10 40.4 1.1 6.6e-06 25.6 0.1 2.4 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF66636 - 8.8e-06 25.3 0.4 2.7 7.8 0.0 5.5 8 1 0 8 8 8 2 PPR repeat SNAP PF14938.6 ORF66636 - 0.003 17.0 1.9 1.1 8.6 0.1 2.3 2 0 0 2 2 2 2 Soluble NSF attachment protein, SNAP TPR_7 PF13176.6 ORF66636 - 0.0051 16.7 0.1 30 4.9 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF66636 - 0.026 15.3 2.8 18 6.4 0.0 3.8 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF3322 PF11795.8 ORF66636 - 0.047 13.7 1.8 1.5 8.8 0.1 2.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) HemY_N PF07219.13 ORF66636 - 0.083 13.1 0.1 0.083 13.1 0.1 1.9 2 0 0 2 2 2 0 HemY protein N-terminus Pkinase PF00069.25 ORF65590 - 1e-41 143.1 0.5 1.2e-41 142.9 0.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF65590 - 3.6e-24 85.4 0.1 4.5e-24 85.1 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF65590 - 0.00026 20.4 0.2 0.28 10.4 0.0 2.2 2 0 0 2 2 2 2 Kinase-like Kdo PF06293.14 ORF65590 - 0.0017 17.8 0.0 0.0025 17.2 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family TssC PF17541.2 ORF65590 - 0.016 14.1 0.0 0.021 13.7 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssC, VipB Haspin_kinase PF12330.8 ORF65590 - 0.02 13.8 1.3 0.038 12.9 1.4 1.4 1 1 0 1 1 1 0 Haspin like kinase domain eRF1_3 PF03465.15 ORF65590 - 0.021 15.3 0.3 0.13 12.8 0.1 2.2 2 1 1 3 3 3 0 eRF1 domain 3 APH PF01636.23 ORF65590 - 0.09 12.7 0.0 0.44 10.4 0.0 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family LRR_4 PF12799.7 ORF64374 - 2.6e-06 27.6 3.6 0.0013 19.1 0.9 3.3 1 1 2 3 3 3 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF64374 - 3e-05 23.7 2.1 0.041 13.6 0.0 3.0 2 1 2 4 4 4 3 Leucine rich repeat LRR_9 PF14580.6 ORF64374 - 8.7e-05 22.1 1.3 0.00044 19.8 1.4 1.9 1 1 0 1 1 1 1 Leucine-rich repeat Armet PF10208.9 ORF64374 - 0.011 15.7 0.0 0.026 14.5 0.0 1.6 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding HAD_2 PF13419.6 ORF64233 - 4.6e-11 43.1 0.0 1.8e-10 41.2 0.0 1.8 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF64233 - 5.2e-09 36.7 1.1 1.2e-06 29.0 1.1 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF64233 - 6.2e-06 26.7 0.2 8e-06 26.4 0.2 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF64233 - 0.0036 17.4 0.0 0.091 12.9 0.0 2.5 2 1 1 3 3 3 1 Haloacid dehalogenase-like hydrolase EF-hand_1 PF00036.32 ORF6241 - 7.5e-26 87.7 1.7 4.6e-06 25.8 0.1 4.5 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF6241 - 7.5e-26 90.4 5.7 1.4e-12 47.8 0.1 3.4 2 1 2 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF6241 - 1.2e-22 77.8 1.7 0.00021 20.9 0.1 4.6 5 0 0 5 5 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF6241 - 1.8e-20 72.5 0.6 5.6e-05 22.9 0.1 4.3 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF6241 - 1.9e-15 55.5 0.5 0.00029 20.2 0.1 3.8 3 0 0 3 3 3 3 EF hand SPARC_Ca_bdg PF10591.9 ORF6241 - 6.5e-08 32.9 0.1 0.00019 21.7 0.0 2.3 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF6241 - 2.2e-05 24.5 0.1 0.079 13.2 0.0 3.3 3 0 0 3 3 3 1 Dockerin type I domain EF-hand_4 PF12763.7 ORF6241 - 0.00021 21.2 0.3 0.13 12.2 0.1 2.8 3 0 0 3 3 3 1 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF6241 - 0.003 17.4 0.2 0.51 10.2 0.0 2.8 3 0 0 3 3 3 1 EF hand EF-hand_9 PF14658.6 ORF6241 - 0.009 16.3 0.0 0.21 11.9 0.0 2.6 3 0 0 3 3 3 1 EF-hand domain DnaG_DnaB_bind PF08278.11 ORF6241 - 0.027 15.1 2.5 0.17 12.5 0.0 2.6 2 1 0 2 2 2 0 DNA primase DnaG DnaB-binding GPHH PF16905.5 ORF6241 - 0.16 11.8 0.0 13 5.6 0.0 2.5 2 0 0 2 2 2 0 Voltage-dependent L-type calcium channel, IQ-associated FAM194 PF14977.6 ORF6241 - 0.26 10.6 0.4 0.94 8.8 0.0 1.8 2 0 0 2 2 2 0 FAM194 protein Aa_trans PF01490.18 ORF61800 - 7.3e-08 31.5 2.5 9.5e-08 31.1 2.5 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DctQ PF04290.12 ORF61800 - 2.7 7.9 13.3 0.067 13.1 2.7 2.9 3 1 0 3 3 3 0 Tripartite ATP-independent periplasmic transporters, DctQ component RsfS PF02410.15 ORF60120 - 8.3e-06 26.2 0.0 1.4e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation Acyl_transf_3 PF01757.22 ORF59433 - 0.00012 21.3 0.9 0.00015 20.9 0.9 1.1 1 0 0 1 1 1 1 Acyltransferase family KH_1 PF00013.29 ORF58702 - 1.6e-20 72.7 1.6 3.6e-12 45.9 0.1 2.2 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF58702 - 0.0019 18.0 1.0 0.0044 16.8 1.0 1.7 1 0 0 1 1 1 1 KH domain DUF484 PF04340.12 ORF58702 - 0.12 12.0 0.1 3.5 7.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function, DUF484 PAXX PF15384.6 ORF57061 - 0.012 15.3 0.1 0.046 13.4 0.0 2.0 1 1 1 2 2 2 0 PAXX, PAralog of XRCC4 and XLF, also called C9orf142 Plavaka PF18759.1 ORF54623 - 0.045 13.0 0.0 0.1 11.8 0.0 1.5 1 1 0 1 1 1 0 Plavaka transposase Renin_r PF07850.14 ORF51183 - 0.01 16.4 0.0 0.022 15.3 0.0 1.5 1 0 0 1 1 1 0 Renin receptor-like protein Glycos_transf_4 PF00953.21 ORF4641 - 4.2e-06 26.8 1.3 4.2e-06 26.8 1.3 2.3 2 1 0 2 2 2 1 Glycosyl transferase family 4 VIT1 PF01988.19 ORF4641 - 0.0012 18.8 0.0 0.0019 18.1 0.0 1.3 1 1 0 1 1 1 1 VIT family SHIPPO-rpt PF07004.12 ORF4535 - 1.1e-07 32.4 41.7 0.011 16.6 0.6 7.3 7 1 0 7 7 7 4 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF4535 - 3 7.2 5.5 2.2 7.6 0.3 2.6 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal SHIPPO-rpt PF07004.12 ORF43509 - 1.1e-07 32.4 41.7 0.011 16.6 0.6 7.3 7 1 0 7 7 7 4 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF43509 - 3 7.2 5.5 2.2 7.6 0.3 2.6 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal FSH1 PF03959.13 ORF40793 - 5.2e-26 91.6 0.0 6.7e-26 91.3 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) CUE PF02845.16 ORF38254 - 7.1e-08 32.0 0.1 1.2e-07 31.3 0.1 1.4 1 0 0 1 1 1 1 CUE domain BUD22 PF09073.10 ORF38254 - 0.013 14.9 21.9 0.015 14.6 21.9 1.1 1 0 0 1 1 1 0 BUD22 DUF2457 PF10446.9 ORF38254 - 0.12 11.5 23.9 0.17 11.0 23.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) RPN2_C PF18004.1 ORF38254 - 2.9 7.8 18.2 1.3 9.0 7.4 2.3 2 0 0 2 2 2 0 26S proteasome regulatory subunit RPN2 C-terminal domain LAP1C PF05609.12 ORF38254 - 2.9 6.9 19.9 3.8 6.5 19.9 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) SHIPPO-rpt PF07004.12 ORF3572 - 1.1e-07 32.4 41.7 0.011 16.6 0.6 7.3 7 1 0 7 7 7 4 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF3572 - 3 7.2 5.5 2.2 7.6 0.3 2.6 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal TMEM61 PF15105.6 ORF35663 - 1 9.2 8.0 1.6 8.5 8.0 1.4 1 0 0 1 1 1 0 TMEM61 protein family Presenilin PF01080.17 ORF35663 - 2.8 6.6 3.3 3.7 6.2 3.3 1.3 1 0 0 1 1 1 0 Presenilin Ndc1_Nup PF09531.10 ORF35663 - 4.4 5.9 9.1 4 6.0 9.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup HpcH_HpaI PF03328.14 ORF35270 - 2.6e-64 216.4 0.1 2.9e-64 216.2 0.1 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 ORF35270 - 0.061 12.2 0.0 0.086 11.7 0.0 1.2 1 0 0 1 1 1 0 Pyruvate kinase, barrel domain HalX PF08663.10 ORF35104 - 0.063 13.6 0.3 0.18 12.1 0.2 1.8 2 0 0 2 2 2 0 HalX domain DDE_1 PF03184.19 ORF30143 - 2e-12 47.1 0.0 2.5e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_1 PF03184.19 ORF30128 - 2e-12 47.1 0.0 2.5e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease TTL PF03133.15 ORF30066 - 3.1e-16 59.4 0.7 1.1e-13 51.0 0.7 2.1 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family FtsH_ext PF06480.15 ORF30066 - 0.033 14.6 2.0 0.15 12.4 0.3 2.7 2 1 0 2 2 2 0 FtsH Extracellular UXS1_N PF11803.8 ORF30066 - 2.5 8.5 0.0 2.5 8.5 0.0 2.6 2 1 0 2 2 2 0 UDP-glucuronate decarboxylase N-terminal SHIPPO-rpt PF07004.12 ORF26324 - 1.1e-07 32.4 41.7 0.011 16.6 0.6 7.3 7 1 0 7 7 7 4 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF26324 - 3 7.2 5.5 2.2 7.6 0.3 2.6 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal AC_N PF16214.5 ORF25333 - 0.11 11.7 3.4 0.13 11.4 3.4 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Syntaxin PF00804.25 ORF25333 - 0.8 9.3 5.2 0.44 10.2 2.8 1.7 1 1 1 2 2 2 0 Syntaxin SHOCT PF09851.9 ORF22483 - 0.013 15.2 0.9 0.074 12.8 0.1 2.5 1 1 1 2 2 2 0 Short C-terminal domain TMIE PF16038.5 ORF22483 - 1.4 8.8 5.5 0.64 9.9 0.8 2.7 2 2 0 2 2 2 0 TMIE protein AstE_AspA PF04952.14 ORF21493 - 1e-09 37.9 0.0 0.00042 19.5 0.0 2.1 2 0 0 2 2 2 2 Succinylglutamate desuccinylase / Aspartoacylase family V_ATPase_I PF01496.19 ORF19414 - 8.7e-81 272.0 0.7 9.7e-81 271.9 0.7 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family LRR19-TM PF15176.6 ORF19414 - 0.015 15.3 0.0 0.031 14.3 0.0 1.5 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain ROK PF00480.20 ORF18490 - 3.2e-29 102.3 0.0 3.5e-29 102.2 0.0 1.0 1 0 0 1 1 1 1 ROK family Haemadin PF09065.10 ORF18490 - 0.47 10.3 5.1 1.8 8.4 0.0 2.5 2 0 0 2 2 2 0 Haemadin Arfaptin PF06456.13 ORF16504 - 0.021 14.4 0.9 0.031 13.9 0.9 1.2 1 0 0 1 1 1 0 Arfaptin-like domain DUF2990 PF11693.8 ORF16504 - 0.088 13.0 0.1 0.18 12.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) HCO3_cotransp PF00955.21 ORF15425 - 2.1e-44 152.2 1.7 8.3e-29 100.8 0.0 2.0 1 1 1 2 2 2 2 HCO3- transporter family Cation_efflux PF01545.21 ORF108974 - 7.4e-16 58.5 1.4 9.9e-16 58.1 1.4 1.1 1 0 0 1 1 1 1 Cation efflux family DUF1400 PF07176.11 ORF108974 - 0.09 13.1 0.6 0.27 11.5 0.6 1.7 1 1 1 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1400) zf-CCCH PF00642.24 ORF108452 - 2.9e-06 27.0 2.6 2.9e-06 27.0 2.6 1.9 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF108452 - 4.5e-05 23.1 4.5 4.5e-05 23.1 4.5 2.0 2 0 0 2 2 2 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 ORF108452 - 0.003 17.6 6.9 0.0067 16.4 6.9 1.6 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 ORF108452 - 0.025 15.3 0.2 0.054 14.2 0.2 1.5 1 0 0 1 1 1 0 Torus domain zf-CCCH_3 PF15663.5 ORF108452 - 0.26 11.5 1.6 0.44 10.8 1.6 1.4 1 0 0 1 1 1 0 Zinc-finger containing family Ubiq_cyt_C_chap PF03981.12 ORF105831 - 2.6e-23 82.7 0.2 4e-23 82.1 0.2 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C chaperone DUF3944 PF13099.6 ORF105831 - 1.3e-15 57.0 0.7 4e-15 55.4 0.7 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF3944) Sdh5 PF03937.16 ORF105831 - 0.023 14.7 1.3 3.4 7.7 0.4 2.5 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase FERM_M PF00373.18 ORF105831 - 0.11 12.9 2.2 0.78 10.2 2.2 2.3 1 1 0 1 1 1 0 FERM central domain DUF1289 PF06945.13 ORF105831 - 0.18 11.6 0.3 0.45 10.4 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1289) Golgin_A5 PF09787.9 ORF100077 - 0.026 14.0 3.3 0.035 13.6 3.3 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 CENP-F_leu_zip PF10473.9 ORF100077 - 0.44 10.6 8.0 1.4 9.0 4.1 2.5 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ADIP PF11559.8 ORF100077 - 3.2 7.8 11.0 0.41 10.7 6.2 1.9 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding zf-H2C2_2 PF13465.6 NODE_30846_length_706_cov_3.490313_g24407_i0forward_frame_1 - 2.9 8.5 9.1 7 7.3 5.0 2.9 2 0 0 2 2 2 0 Zinc-finger double domain DUF3119 PF11317.8 NODE_30839_length_706_cov_6.220566_g24400_i0reverse_frame_1 - 0.2 11.9 0.4 0.38 11.0 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3119) Cyclin_N PF00134.23 NODE_30778_length_707_cov_126.693452_g17920_i2reverse_frame_1 - 0.00016 21.4 0.1 0.00027 20.7 0.1 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 NODE_30778_length_707_cov_126.693452_g17920_i2reverse_frame_1 - 0.00023 21.6 0.6 0.0003 21.2 0.6 1.2 1 0 0 1 1 1 1 Cyclin DUF4728 PF15860.5 NODE_30758_length_707_cov_456.553571_g24331_i0reverse_frame_1 - 0.12 13.1 7.9 0.096 13.4 6.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4728) RVT_thumb PF06817.14 NODE_30703_length_708_cov_315.150074_g24284_i1reverse_frame_1 - 0.067 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Reverse transcriptase thumb domain RVT_thumb PF06817.14 NODE_30701_length_708_cov_320.254086_g24284_i0reverse_frame_1 - 0.066 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Reverse transcriptase thumb domain Aldolase PF01081.19 NODE_30686_length_709_cov_2.345697_g24274_i0reverse_frame_2 - 1e-48 165.3 4.2 1.3e-48 165.0 4.2 1.1 1 0 0 1 1 1 1 KDPG and KHG aldolase ILVD_EDD PF00920.21 NODE_30686_length_709_cov_2.345697_g24274_i0reverse_frame_2 - 1.9e-22 79.6 1.0 4.7e-22 78.3 0.1 1.8 2 0 0 2 2 2 1 Dehydratase family HMGL-like PF00682.19 NODE_30686_length_709_cov_2.345697_g24274_i0reverse_frame_2 - 0.012 15.1 0.3 0.019 14.5 0.3 1.2 1 0 0 1 1 1 0 HMGL-like TRIC PF05197.13 NODE_30666_length_709_cov_163.841246_g24256_i0reverse_frame_2 - 0.0069 16.0 0.4 0.0093 15.6 0.4 1.2 1 0 0 1 1 1 1 TRIC channel Abhydro_lipase PF04083.16 NODE_30660_length_709_cov_434.528190_g6807_i2forward_frame_2 - 4.3e-17 61.4 0.0 8.3e-17 60.5 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_30660_length_709_cov_434.528190_g6807_i2forward_frame_2 - 1.9e-12 47.4 0.0 2.6e-12 47.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_30660_length_709_cov_434.528190_g6807_i2forward_frame_2 - 0.013 14.7 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Methyltransf_11 PF08241.12 NODE_30632_length_710_cov_184.854815_g24225_i0reverse_frame_2 - 1.1e-05 26.0 0.3 7.2e-05 23.4 0.1 2.4 2 2 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_30632_length_710_cov_184.854815_g24225_i0reverse_frame_2 - 0.00055 20.6 0.1 0.018 15.7 0.1 2.9 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_30632_length_710_cov_184.854815_g24225_i0reverse_frame_2 - 0.018 14.8 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DNA_binding_1 PF01035.20 NODE_30632_length_710_cov_184.854815_g24225_i0reverse_frame_2 - 0.099 12.8 0.1 0.21 11.7 0.1 1.5 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, DNA binding domain ArsA_HSP20 PF17886.1 NODE_30632_length_710_cov_184.854815_g24225_i0reverse_frame_2 - 0.1 12.2 0.1 0.25 10.9 0.0 1.8 2 0 0 2 2 2 0 HSP20-like domain found in ArsA HIRAN PF08797.11 NODE_30611_length_710_cov_59204.733333_g10629_i2reverse_frame_2 - 0.12 12.3 0.0 16 5.5 0.0 2.7 3 0 0 3 3 3 0 HIRAN domain p450 PF00067.22 NODE_30611_length_710_cov_59204.733333_g10629_i2forward_frame_2 - 3.3e-10 39.3 0.1 1.2e-09 37.5 0.1 1.7 1 1 0 1 1 1 1 Cytochrome P450 Mei5_like PF17021.5 NODE_30611_length_710_cov_59204.733333_g10629_i2forward_frame_2 - 0.0028 17.7 0.1 0.0054 16.8 0.1 1.4 1 0 0 1 1 1 1 Putative double-strand recombination repair-like DS PF01916.17 NODE_30611_length_710_cov_59204.733333_g10629_i2forward_frame_2 - 0.034 13.4 0.0 0.049 12.9 0.0 1.2 1 0 0 1 1 1 0 Deoxyhypusine synthase Peptidase_C92 PF05708.12 NODE_30610_length_711_cov_2.217456_g24207_i0forward_frame_3 - 3.8e-44 150.7 0.0 4.9e-44 150.4 0.0 1.2 1 0 0 1 1 1 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ILVD_EDD PF00920.21 NODE_30608_length_711_cov_2.662722_g24205_i0reverse_frame_2 - 9.5e-63 212.6 0.0 1.1e-62 212.4 0.0 1.0 1 0 0 1 1 1 1 Dehydratase family Spem1 PF15670.5 NODE_30606_length_711_cov_2.914201_g24203_i0reverse_frame_2 - 0.19 11.3 1.4 0.26 10.8 1.4 1.2 1 0 0 1 1 1 0 Spermatid maturation protein 1 GPR15L PF15854.5 NODE_30606_length_711_cov_2.914201_g24203_i0reverse_frame_2 - 1.6 9.0 5.7 5.4 7.3 0.1 2.5 2 1 1 3 3 3 0 G-protein coupled receptor ligand 15 Toprim_N PF08275.11 NODE_30606_length_711_cov_2.914201_g24203_i0forward_frame_2 - 4.6e-29 101.1 0.0 7e-29 100.5 0.0 1.3 1 0 0 1 1 1 1 DNA primase catalytic core, N-terminal domain Toprim_2 PF13155.6 NODE_30606_length_711_cov_2.914201_g24203_i0forward_frame_2 - 1.8e-15 57.1 0.0 2.8e-15 56.5 0.0 1.3 1 0 0 1 1 1 1 Toprim-like Toprim_4 PF13662.6 NODE_30606_length_711_cov_2.914201_g24203_i0forward_frame_2 - 2.6e-15 56.7 0.0 4.6e-15 55.9 0.0 1.4 1 0 0 1 1 1 1 Toprim domain Toprim PF01751.22 NODE_30606_length_711_cov_2.914201_g24203_i0forward_frame_2 - 1.3e-10 41.4 0.0 2.1e-10 40.8 0.0 1.3 1 0 0 1 1 1 1 Toprim domain DnaB_bind PF10410.9 NODE_30606_length_711_cov_2.914201_g24203_i0forward_frame_2 - 2.6e-09 37.1 0.0 5e-09 36.2 0.0 1.5 1 0 0 1 1 1 1 DnaB-helicase binding domain of primase Toprim_3 PF13362.6 NODE_30606_length_711_cov_2.914201_g24203_i0forward_frame_2 - 2.3e-08 34.3 0.0 3.5e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Toprim domain Cyt-b5 PF00173.28 NODE_30592_length_711_cov_107.532544_g24189_i0reverse_frame_3 - 2.6e-08 33.9 0.1 4.8e-08 33.0 0.1 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Cyt-b5 PF00173.28 NODE_30592_length_711_cov_107.532544_g24189_i0reverse_frame_2 - 3.1e-18 65.7 0.0 5.2e-18 64.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain WRC PF08879.10 NODE_30592_length_711_cov_107.532544_g24189_i0forward_frame_2 - 0.044 13.5 0.2 0.077 12.7 0.2 1.3 1 0 0 1 1 1 0 WRC MRP-63 PF14978.6 NODE_30585_length_711_cov_206.853550_g24182_i0forward_frame_2 - 0.041 14.5 0.4 0.15 12.7 0.2 2.0 1 1 1 2 2 2 0 Mitochondrial ribosome protein 63 MMR_HSR1 PF01926.23 ORF98294 - 1.1e-17 64.2 0.0 1.3e-17 63.9 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF98294 - 5.8e-08 32.4 0.0 8.5e-08 31.9 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF98294 - 0.0005 20.2 0.0 0.26 11.3 0.0 2.1 1 1 1 2 2 2 2 Dynamin family SRPRB PF09439.10 ORF98294 - 0.0044 16.5 0.0 0.0056 16.1 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ploopntkinase3 PF18751.1 ORF98294 - 0.15 12.0 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 Arf PF00025.21 ORF98294 - 0.17 11.3 0.0 0.27 10.7 0.0 1.3 1 1 0 1 1 1 0 ADP-ribosylation factor family Roc PF08477.13 ORF98294 - 0.22 11.7 0.0 4.1 7.7 0.0 2.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Alpha_adaptinC2 PF02883.20 ORF97979 - 6.7e-26 90.8 0.0 8.6e-26 90.4 0.0 1.1 1 0 0 1 1 1 1 Adaptin C-terminal domain DnaJ PF00226.31 ORF97404 - 4.1e-28 97.3 1.7 5.7e-28 96.8 1.7 1.2 1 0 0 1 1 1 1 DnaJ domain DUF4766 PF15973.5 ORF97404 - 6.2 7.4 19.4 4.4 7.9 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4766) ArfGap PF01412.18 ORF97207 - 0.0083 16.2 0.1 0.0083 16.2 0.1 2.2 3 1 0 3 3 3 1 Putative GTPase activating protein for Arf ASL_C PF08328.11 ORF97207 - 0.085 13.0 0.4 0.56 10.3 0.0 2.1 2 0 0 2 2 2 0 Adenylosuccinate lyase C-terminal CAP PF00188.26 ORF9693 - 1.1e-06 29.5 0.0 1.4e-06 29.1 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family MORN PF02493.20 ORF94770 - 5e-05 22.9 1.3 8.6e-05 22.2 0.1 2.0 2 0 0 2 2 2 1 MORN repeat AceK PF06315.11 ORF94770 - 0.0031 16.1 0.6 0.0037 15.8 0.6 1.0 1 0 0 1 1 1 1 Isocitrate dehydrogenase kinase/phosphatase (AceK) NlpE_C PF17185.4 ORF91929 - 5.2e-33 113.2 0.1 2.2e-32 111.2 0.0 2.0 2 1 0 2 2 2 1 NlpE C-terminal OB domain NlpE PF04170.12 ORF91929 - 6.8e-27 94.3 0.0 1.6e-26 93.0 0.0 1.7 1 0 0 1 1 1 1 NlpE N-terminal domain DUF4874 PF16173.5 ORF91003 - 0.033 13.9 0.5 0.11 12.1 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4874) Disulph_isomer PF06491.11 ORF91003 - 0.14 12.2 0.1 0.3 11.2 0.0 1.5 2 0 0 2 2 2 0 Disulphide isomerase PHD PF00628.29 ORF90900 - 1.2e-06 28.2 13.8 0.00018 21.3 7.5 2.7 2 1 0 2 2 2 2 PHD-finger zf-HC5HC2H PF13771.6 ORF90900 - 0.0021 18.3 19.3 0.025 14.8 2.9 2.8 1 1 2 3 3 3 2 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 ORF90900 - 0.024 14.8 15.4 0.19 11.9 1.6 2.6 1 1 1 2 2 2 0 PHD-zinc-finger like domain C1_1 PF00130.22 ORF90900 - 3.4 7.6 18.1 0.6 10.0 11.1 2.5 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD_4 PF16866.5 ORF90900 - 3.9 7.6 13.2 7 6.8 0.6 3.1 1 1 2 3 3 3 0 PHD-finger Zf_RING PF16744.5 ORF90900 - 5.7 7.1 9.9 16 5.7 3.3 2.5 1 1 1 2 2 2 0 KIAA1045 RING finger Form_Nir_trans PF01226.17 ORF90858 - 8.5e-54 182.4 29.3 9.6e-54 182.2 29.3 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter Nod1 PF17114.5 ORF90657 - 0.0053 16.9 0.6 0.0086 16.2 0.6 1.4 1 1 0 1 1 1 1 Gef2-related medial cortical node protein Nod1 DUF1053 PF06327.14 ORF90657 - 0.57 10.8 5.5 1.5 9.4 0.1 2.9 2 1 1 3 3 3 0 Domain of Unknown Function (DUF1053) CAP PF00188.26 ORF89152 - 1.1e-06 29.5 0.0 1.4e-06 29.1 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family EF-hand_7 PF13499.6 ORF89008 - 0.003 18.0 2.0 0.29 11.6 2.0 2.7 1 1 0 1 1 1 1 EF-hand domain pair Pellino PF04710.14 ORF89008 - 0.013 14.2 1.2 0.015 14.0 1.2 1.1 1 0 0 1 1 1 0 Pellino EF-hand_6 PF13405.6 ORF89008 - 0.17 11.9 0.7 33 4.8 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain UDPG_MGDP_dh_C PF03720.15 ORF88578 - 0.034 14.6 0.0 0.056 13.9 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PPR_2 PF13041.6 ORF86439 - 1.2e-07 31.8 0.0 0.0017 18.5 0.0 2.8 2 1 0 2 2 2 2 PPR repeat family PPR PF01535.20 ORF86439 - 0.00015 21.8 0.2 8.2 6.9 0.0 4.4 4 0 0 4 4 4 2 PPR repeat PPR_3 PF13812.6 ORF86439 - 0.011 15.8 0.0 0.04 14.0 0.0 2.0 2 1 0 2 2 2 0 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF86439 - 0.095 12.4 0.0 0.34 10.7 0.0 2.0 2 0 0 2 2 2 0 PPR repeat Pkinase PF00069.25 ORF86109 - 7.4e-52 176.3 0.0 8.8e-52 176.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86109 - 1.6e-18 66.9 0.0 2.8e-18 66.1 0.0 1.3 2 0 0 2 2 2 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF86109 - 1.1e-05 24.5 0.0 1.8e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF86109 - 0.027 13.3 0.1 0.073 11.8 0.1 1.4 1 1 1 2 2 2 0 Fungal protein kinase Lyase_8_N PF08124.11 ORF86109 - 0.052 12.5 0.0 0.075 11.9 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain Kdo PF06293.14 ORF86109 - 0.059 12.7 0.0 0.093 12.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF86109 - 0.092 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Nod1 PF17114.5 ORF84284 - 0.0053 16.9 0.6 0.0086 16.2 0.6 1.4 1 1 0 1 1 1 1 Gef2-related medial cortical node protein Nod1 DUF1053 PF06327.14 ORF84284 - 0.57 10.8 5.5 1.5 9.4 0.1 2.9 2 1 1 3 3 3 0 Domain of Unknown Function (DUF1053) Alpha_adaptinC2 PF02883.20 ORF84248 - 6.7e-26 90.8 0.0 8.6e-26 90.4 0.0 1.1 1 0 0 1 1 1 1 Adaptin C-terminal domain zf-RING_2 PF13639.6 ORF76427 - 2.9e-13 49.9 6.6 2.9e-13 49.9 6.6 2.2 3 0 0 3 3 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF76427 - 1.6e-11 43.9 5.3 1.6e-11 43.9 5.3 2.0 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF76427 - 1.2e-10 40.9 10.9 3.7e-10 39.4 1.5 3.5 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF76427 - 6.7e-08 32.3 5.0 1.4e-07 31.2 5.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF76427 - 1.9e-07 31.3 7.0 1.9e-07 31.3 7.0 2.5 3 1 0 3 3 2 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF76427 - 3.2e-07 30.2 5.5 3.2e-07 30.2 5.5 1.9 2 0 0 2 2 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF76427 - 3.3e-07 30.1 5.7 3.3e-07 30.1 5.7 1.8 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF76427 - 1.4e-06 28.2 10.0 2.7e-05 24.1 0.4 3.3 3 0 0 3 3 3 2 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF76427 - 0.00055 19.7 4.7 0.0014 18.4 4.7 1.8 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Prok-RING_1 PF14446.6 ORF76427 - 0.0046 16.9 4.3 0.11 12.4 0.9 2.6 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Zn_ribbon_17 PF17120.5 ORF76427 - 0.0065 16.1 5.0 0.018 14.7 5.0 1.8 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF76427 - 0.0084 16.1 3.7 0.0084 16.1 3.7 2.3 2 1 1 3 3 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 ORF76427 - 0.044 13.6 1.9 0.097 12.5 1.9 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING-like PF08746.11 ORF76427 - 0.046 14.0 4.6 0.046 14.0 4.6 2.1 2 0 0 2 2 2 0 RING-like domain DUF4432 PF14486.6 ORF76427 - 0.048 12.4 0.2 0.064 12.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4432) RINGv PF12906.7 ORF76427 - 0.05 13.7 4.8 0.05 13.7 4.8 2.5 2 1 0 2 2 2 0 RING-variant domain Vps39_2 PF10367.9 ORF76427 - 0.063 13.7 0.6 1.1 9.7 0.3 2.2 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 zf-C3H2C3 PF17122.5 ORF76427 - 0.11 12.5 2.2 0.45 10.6 2.2 2.1 1 1 0 1 1 1 0 Zinc-finger RuBisCO_large PF00016.20 ORF76427 - 0.12 11.5 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, catalytic domain hNIFK_binding PF12196.8 ORF76427 - 0.14 11.7 3.6 0.72 9.4 0.1 2.6 2 0 0 2 2 2 0 FHA Ki67 binding domain of hNIFK zf-RING_10 PF16685.5 ORF76427 - 0.3 11.3 3.7 0.63 10.2 3.7 1.5 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-C3HC4_4 PF15227.6 ORF76427 - 0.58 10.4 6.4 11 6.3 6.4 2.9 1 1 2 3 3 3 0 zinc finger of C3HC4-type, RING zf-CCHC_6 PF15288.6 ORF76427 - 6.7 6.6 10.1 1.1 9.2 0.3 3.0 3 0 0 3 3 2 0 Zinc knuckle PEX11 PF05648.14 ORF73206 - 5e-18 65.4 2.0 6.2e-18 65.1 2.0 1.2 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) Asp PF00026.23 ORF73196 - 1.4e-13 51.0 0.0 1.8e-13 50.6 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF73196 - 0.093 12.5 0.0 0.2 11.4 0.0 1.5 2 0 0 2 2 2 0 Xylanase inhibitor C-terminal GLTP PF08718.11 ORF71561 - 5.4e-22 78.7 0.2 6.5e-21 75.2 0.2 2.0 1 1 0 1 1 1 1 Glycolipid transfer protein (GLTP) ABM PF03992.16 ORF69715 - 1.2e-20 73.3 1.1 7e-13 48.5 0.1 2.2 2 0 0 2 2 2 2 Antibiotic biosynthesis monooxygenase Toprim PF01751.22 ORF69474 - 3.7e-05 23.9 0.0 0.00013 22.1 0.0 1.9 2 1 0 2 2 2 1 Toprim domain Methyltransf_11 PF08241.12 ORF68669 - 5.2e-13 49.5 0.2 9.1e-13 48.7 0.2 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF68669 - 2.1e-12 47.1 0.2 2.9e-12 46.6 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF68669 - 1.2e-11 45.2 0.4 2.3e-11 44.2 0.4 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF68669 - 1.9e-10 41.3 0.2 4e-10 40.3 0.2 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF68669 - 8.1e-08 32.3 0.0 9.4e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF68669 - 0.012 14.9 0.0 0.019 14.3 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MTS PF05175.14 ORF68669 - 0.014 15.0 0.2 0.042 13.4 0.2 1.8 1 1 0 1 1 1 0 Methyltransferase small domain Methyltransf_16 PF10294.9 ORF68669 - 0.089 12.5 0.9 0.64 9.7 0.9 2.0 1 1 0 1 1 1 0 Lysine methyltransferase Methyltransf_29 PF03141.16 ORF68669 - 0.12 10.9 0.1 0.18 10.3 0.1 1.3 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase PrmA PF06325.13 ORF68669 - 0.17 11.2 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) EzrA PF06160.12 ORF65891 - 0.0069 14.6 1.7 0.009 14.2 1.7 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA DUF3361 PF11841.8 ORF65891 - 0.035 14.0 1.5 0.052 13.5 1.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3361) Glycos_transf_2 PF00535.26 ORF58824 - 0.0011 18.8 0.1 0.0027 17.5 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 ORF58824 - 0.0037 17.2 0.0 0.0052 16.7 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF58824 - 0.18 11.7 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF4191 PF13829.6 ORF52994 - 3.2 7.0 8.1 2.9 7.2 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) Metallophos PF00149.28 ORF52640 - 1.1e-05 26.0 0.2 1.7e-05 25.4 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF52640 - 0.012 16.5 0.2 0.027 15.3 0.2 1.5 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C Glyco_tran_28_C PF04101.16 ORF50269 - 8.5e-07 29.1 0.0 1.7e-06 28.1 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_4 PF13692.6 ORF50269 - 0.0001 22.7 0.1 0.00015 22.2 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 ORF50269 - 0.0063 16.1 0.0 0.0086 15.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_tran_WecB PF03808.13 ORF50269 - 0.13 12.2 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family PK_C PF02887.16 ORF50269 - 0.15 12.3 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain DUF1279 PF06916.13 ORF50184 - 4.2e-15 56.1 0.7 4.2e-15 56.1 0.7 2.5 3 0 0 3 3 3 1 Protein of unknown function (DUF1279) GbpC PF08363.10 ORF49105 - 0.033 13.6 0.1 0.048 13.1 0.1 1.3 1 0 0 1 1 1 0 Glucan-binding protein C Rap1-DNA-bind PF09197.10 ORF49105 - 0.13 12.9 1.4 0.22 12.1 1.4 1.5 1 1 0 1 1 1 0 Rap1, DNA-binding GpcrRhopsn4 PF10192.9 ORF4380 - 0.13 11.7 0.1 0.17 11.3 0.1 1.1 1 0 0 1 1 1 0 Rhodopsin-like GPCR transmembrane domain Pericardin_rpt PF07054.11 ORF4380 - 4.3 7.5 22.0 0.22 11.7 9.9 2.7 2 0 0 2 2 2 0 Pericardin like repeat ABC_membrane_2 PF06472.15 ORF42277 - 2.1 7.7 9.1 0.28 10.6 3.7 2.0 1 1 1 2 2 2 0 ABC transporter transmembrane region 2 Ribosomal_L30_N PF08079.12 ORF39842 - 0.17 12.2 4.1 0.35 11.2 4.1 1.5 1 0 0 1 1 1 0 Ribosomal L30 N-terminal domain TGT PF01702.18 ORF38971 - 2.2e-96 323.1 0.0 2.4e-96 322.9 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase LupA PF18242.1 ORF38971 - 0.05 13.3 0.0 0.14 11.8 0.0 1.8 2 1 0 2 2 2 0 Legionella ubiquitin-specific protease A domain EF-hand_7 PF13499.6 ORF38690 - 0.015 15.7 0.0 0.015 15.7 0.0 2.3 2 1 0 2 2 2 0 EF-hand domain pair DUF2634 PF10934.8 ORF38690 - 0.039 14.1 6.5 0.084 13.0 5.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2634) EF-hand_5 PF13202.6 ORF38690 - 0.075 12.6 0.0 0.2 11.2 0.0 1.8 1 0 0 1 1 1 0 EF hand CdiI PF07262.11 ORF38690 - 0.16 11.7 5.8 0.31 10.8 5.8 1.5 1 0 0 1 1 1 0 CDI immunity protein EF-hand_6 PF13405.6 ORF38690 - 0.2 11.7 0.0 0.2 11.7 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain DUF3584 PF12128.8 ORF38690 - 0.57 7.6 17.8 0.78 7.2 17.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) CAF1 PF04857.20 ORF38690 - 0.59 9.3 5.3 0.71 9.0 5.3 1.3 1 0 0 1 1 1 0 CAF1 family ribonuclease V_ATPase_I PF01496.19 ORF38690 - 2.6 5.9 9.7 2.9 5.7 9.7 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TFIIE_beta PF02186.15 ORF38690 - 2.6 8.4 13.0 8.9 6.7 0.1 4.3 1 1 3 4 4 4 0 TFIIE beta subunit core domain Exonuc_VII_L PF02601.15 ORF38690 - 2.8 7.4 9.7 3.9 6.9 9.7 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit FGGY_C PF02782.16 ORF37639 - 2.1e-20 73.3 0.1 2.6e-20 73.0 0.1 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain WW_like PF17890.1 ORF37639 - 0.09 12.9 0.0 0.36 10.9 0.0 1.9 2 0 0 2 2 2 0 Peptidoglycan hydrolase LytB WW-like domain DnaJ PF00226.31 ORF36075 - 0.00031 20.8 0.3 0.00068 19.7 0.0 1.7 2 0 0 2 2 2 1 DnaJ domain Dickkopf_N PF04706.12 ORF35813 - 0.015 15.8 7.9 0.015 15.8 7.9 2.2 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region EB PF01683.18 ORF35813 - 0.046 14.0 6.0 0.046 14.0 6.0 2.0 2 0 0 2 2 2 0 EB module 6PF2K PF01591.18 ORF35813 - 0.059 12.7 0.5 0.084 12.2 0.5 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Toxin_2 PF00451.19 ORF35813 - 7.6 6.9 12.9 11 6.5 10.7 2.5 2 1 0 2 2 2 0 Scorpion short toxin, BmKK2 SBF_like PF13593.6 ORF35802 - 4e-78 262.9 15.5 4.5e-78 262.7 15.5 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) SBF PF01758.16 ORF35802 - 1.7e-06 27.8 2.9 1.7e-06 27.8 2.9 2.4 1 1 1 2 2 2 1 Sodium Bile acid symporter family IGF2_C PF08365.11 ORF35802 - 0.044 13.8 0.3 0.077 13.0 0.3 1.4 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide Gaa1 PF04114.14 ORF35802 - 1.1 8.2 8.1 0.2 10.6 4.5 1.5 2 0 0 2 2 2 0 Gaa1-like, GPI transamidase component EphA2_TM PF14575.6 ORF35802 - 1.5 9.7 4.6 12 6.9 0.9 2.5 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Mt_ATP-synt_D PF05873.12 ORF32917 - 2.1e-05 24.4 1.6 3.5e-05 23.7 1.6 1.3 1 0 0 1 1 1 1 ATP synthase D chain, mitochondrial (ATP5H) FAM195 PF14799.6 ORF32917 - 0.04 14.2 0.2 0.084 13.2 0.2 1.5 1 0 0 1 1 1 0 FAM195 family NAD_binding_8 PF13450.6 ORF31756 - 6.2e-12 45.6 0.0 1.1e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 ORF31756 - 1.2e-06 28.1 0.0 1.4e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DAO PF01266.24 ORF31756 - 1.4e-05 24.8 0.0 1.6e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 ORF31756 - 0.0037 16.6 0.0 0.0057 15.9 0.0 1.2 1 0 0 1 1 1 1 Thi4 family Trp_halogenase PF04820.14 ORF31756 - 0.005 15.7 0.0 0.0072 15.2 0.0 1.2 1 0 0 1 1 1 1 Tryptophan halogenase MCRA PF06100.11 ORF31756 - 0.0054 15.6 0.0 0.0061 15.4 0.0 1.2 1 0 0 1 1 1 1 MCRA family Pyr_redox_2 PF07992.14 ORF31756 - 0.013 14.7 0.0 0.018 14.2 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase LUC7 PF03194.15 ORF30244 - 5.5e-14 52.4 5.0 8e-14 51.9 5.0 1.4 1 0 0 1 1 1 1 LUC7 N_terminus WXG100 PF06013.12 ORF30244 - 0.035 14.3 0.3 0.077 13.2 0.3 1.6 1 0 0 1 1 1 0 Proteins of 100 residues with WXG DUF2284 PF10050.9 ORF30244 - 0.065 13.0 0.2 0.097 12.4 0.2 1.3 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) SH3_3 PF08239.11 ORF29845 - 0.047 14.0 0.1 0.085 13.2 0.1 1.4 1 0 0 1 1 1 0 Bacterial SH3 domain DUF3989 PF13150.6 ORF27047 - 0.0081 15.9 2.1 0.017 14.8 1.7 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3989) TFIIE_beta PF02186.15 ORF27047 - 0.052 13.8 3.8 0.53 10.6 0.3 3.4 2 1 2 4 4 4 0 TFIIE beta subunit core domain S1 PF00575.23 ORF25090 - 1e-12 48.2 2.3 2e-06 28.0 0.1 2.2 2 0 0 2 2 2 2 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF25090 - 0.0007 19.5 3.9 0.011 15.7 0.1 3.1 3 0 0 3 3 3 1 RNase II-type exonuclease C-terminal S1 domain S1_2 PF13509.6 ORF25090 - 0.0044 17.1 0.0 0.92 9.6 0.0 3.3 4 0 0 4 4 4 1 S1 domain CusF_Ec PF11604.8 ORF25090 - 0.012 15.6 1.3 12 5.9 0.1 3.4 3 1 1 4 4 4 0 Copper binding periplasmic protein CusF PCB_OB PF17092.5 ORF25090 - 0.098 13.4 3.3 0.16 12.7 1.2 2.1 1 1 1 2 2 2 0 Penicillin-binding protein OB-like domain TRAM PF01938.20 ORF25090 - 2.8 8.0 5.0 3 7.9 0.1 3.1 3 1 1 4 4 4 0 TRAM domain UMP1 PF05348.11 ORF22317 - 0.17 12.2 2.9 0.28 11.4 2.9 1.3 1 0 0 1 1 1 0 Proteasome maturation factor UMP1 GCP_C_terminal PF04130.13 ORF20634 - 5.7e-42 144.2 4.1 6.5e-42 144.1 4.1 1.0 1 0 0 1 1 1 1 Gamma tubulin complex component C-terminal zf-RING_2 PF13639.6 ORF20055 - 1.4e-10 41.3 7.4 3.7e-10 40.0 7.4 1.8 1 0 0 1 1 1 1 Ring finger domain HEAT PF02985.22 ORF20055 - 9.2e-08 31.7 2.7 0.0013 18.8 0.0 2.8 2 0 0 2 2 2 2 HEAT repeat zf-RING_UBOX PF13445.6 ORF20055 - 1.1e-06 28.6 5.2 1.3e-06 28.4 2.7 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF20055 - 9.1e-06 25.5 5.6 2.2e-05 24.2 5.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF20055 - 1.7e-05 25.0 7.8 6.1e-05 23.2 7.8 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain HEAT_2 PF13646.6 ORF20055 - 4.8e-05 23.7 9.6 0.0045 17.4 2.7 2.2 1 1 1 2 2 2 2 HEAT repeats zf-RING_11 PF17123.5 ORF20055 - 0.00014 21.5 1.7 0.00014 21.5 1.7 2.2 2 0 0 2 2 1 1 RING-like zinc finger HEAT_EZ PF13513.6 ORF20055 - 0.00016 22.1 8.8 0.004 17.6 2.4 2.6 2 0 0 2 2 2 2 HEAT-like repeat Prok-RING_4 PF14447.6 ORF20055 - 0.00025 20.8 4.5 0.0013 18.6 4.7 2.1 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF20055 - 0.00033 20.6 5.6 0.0009 19.2 5.6 1.8 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF20055 - 0.0007 19.2 3.9 0.0018 17.8 3.9 1.8 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF20055 - 0.0046 17.0 2.5 0.012 15.7 2.7 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF20055 - 0.0063 16.3 7.2 0.031 14.1 7.3 2.1 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Vac14_Fab1_bd PF12755.7 ORF20055 - 0.0073 16.9 0.0 0.091 13.4 0.0 2.1 1 1 0 1 1 1 1 Vacuolar 14 Fab1-binding region zf-C3HC4_2 PF13923.6 ORF20055 - 0.017 14.9 9.9 0.11 12.4 9.9 2.3 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Nitr_red_bet_C PF14711.6 ORF20055 - 0.024 14.3 0.3 0.044 13.5 0.3 1.4 1 0 0 1 1 1 0 Respiratory nitrate reductase beta C-terminal Baculo_IE-1 PF05290.11 ORF20055 - 0.049 13.6 0.5 0.084 12.8 0.5 1.4 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) HrpB1_HrpK PF09613.10 ORF20055 - 0.069 12.8 3.7 0.23 11.1 3.6 1.8 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) UPF0547 PF10571.9 ORF20055 - 0.07 13.2 3.1 5.7 7.1 0.2 3.0 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 Cnd1 PF12717.7 ORF20055 - 0.21 11.6 0.5 1.5 8.9 0.5 2.0 1 1 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 zf-C3HC4_4 PF15227.6 ORF20055 - 0.36 11.0 6.5 1.1 9.5 6.5 1.9 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 ORF20055 - 0.44 10.8 7.0 1.7 8.9 7.0 2.0 1 1 0 1 1 1 0 FANCL C-terminal domain YdjO PF14169.6 ORF20055 - 0.45 10.3 2.6 1.4 8.7 0.4 2.2 2 0 0 2 2 2 0 Cold-inducible protein YdjO zf-RING_10 PF16685.5 ORF20055 - 1.1 9.4 4.8 2.5 8.3 4.8 1.6 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-C3H2C3 PF17122.5 ORF20055 - 1.6 8.8 8.1 3.8 7.6 1.2 2.7 2 1 0 2 2 2 0 Zinc-finger Nitrate_red_del PF02613.15 ORF19709 - 3.9e-13 49.6 3.3 4.5e-13 49.4 2.4 1.6 1 1 0 1 1 1 1 Nitrate reductase delta subunit FKBP_C PF00254.28 ORF16219 - 5.6e-24 84.3 0.0 1e-23 83.4 0.0 1.5 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase XPC-binding PF09280.11 ORF16219 - 0.11 12.2 0.2 0.24 11.2 0.2 1.5 1 0 0 1 1 1 0 XPC-binding domain Halo_GVPC PF05465.13 ORF16166 - 0.077 13.3 0.1 1.1e+02 3.1 0.0 3.3 3 0 0 3 3 3 0 Halobacterial gas vesicle protein C (GVPC) repeat zf-primase PF09329.11 ORF15155 - 0.0013 18.5 1.6 0.0025 17.6 1.6 1.5 1 0 0 1 1 1 1 Primase zinc finger PyocinActivator PF11112.8 ORF15155 - 0.0035 17.4 0.8 0.01 16.0 0.1 2.1 3 0 0 3 3 3 1 Pyocin activator protein PrtN COQ7 PF03232.13 ORF14461 - 1 9.1 3.6 0.3 10.8 0.2 1.8 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 Na_H_Exchanger PF00999.21 ORF13346 - 0.0011 17.9 3.3 0.0012 17.7 3.3 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family EnY2 PF10163.9 ORF13346 - 0.037 14.4 2.6 0.63 10.4 0.1 3.0 3 0 0 3 3 3 0 Transcription factor e(y)2 Mhr1 PF12829.7 ORF13346 - 0.1 12.7 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulation of mitochondrial recombination Metallophos PF00149.28 ORF13056 - 1.1e-05 26.0 0.2 1.7e-05 25.4 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF13056 - 0.012 16.5 0.2 0.027 15.3 0.2 1.5 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C Pkinase_Tyr PF07714.17 ORF111564 - 0.091 12.0 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase Peptidase_C54 PF03416.19 ORF109775 - 2.6e-50 171.4 0.1 2.9e-50 171.2 0.1 1.0 1 0 0 1 1 1 1 Peptidase family C54 Peptidase_C78 PF07910.13 ORF109775 - 0.1 12.1 0.2 0.18 11.3 0.2 1.6 1 1 0 1 1 1 0 Peptidase family C78 Pirin PF02678.16 ORF109303 - 7.4e-38 128.8 0.5 1.1e-37 128.2 0.5 1.3 1 0 0 1 1 1 1 Pirin Pirin_C_2 PF17954.1 ORF109303 - 5.2e-30 103.5 0.8 2e-29 101.6 0.4 2.0 2 0 0 2 2 2 1 Quercetinase C-terminal cupin domain Cupin_2 PF07883.11 ORF109303 - 2.5e-07 30.3 0.8 5.9e-07 29.1 0.3 1.9 2 0 0 2 2 2 1 Cupin domain Pirin_C PF05726.13 ORF109303 - 0.0034 17.7 0.0 2.3 8.6 0.0 2.2 2 0 0 2 2 2 2 Pirin C-terminal cupin domain DUF3412 PF11892.8 ORF109303 - 0.059 13.5 0.0 0.099 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3412) 2OG-FeII_Oxy PF03171.20 ORF109303 - 0.074 13.5 0.0 0.8 10.2 0.0 2.3 2 1 0 2 2 2 0 2OG-Fe(II) oxygenase superfamily DUF648 PF04890.13 ORF107850 - 0.098 12.4 1.1 0.15 11.8 1.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF648) Lipase_3 PF01764.25 ORF107518 - 9.2e-30 103.4 0.0 1.5e-29 102.7 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF107518 - 0.003 18.2 0.0 0.0038 17.8 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF107518 - 0.011 15.1 0.0 0.019 14.2 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF107518 - 0.021 14.4 0.2 0.042 13.4 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2974) DUF2400 PF09674.10 ORF107518 - 0.039 14.0 0.1 0.058 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) MSA-2c PF12238.8 ORF107518 - 0.082 12.9 1.3 0.12 12.4 1.4 1.3 1 1 0 1 1 1 0 Merozoite surface antigen 2c Abhydrolase_5 PF12695.7 ORF107518 - 0.098 12.4 0.0 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 Alpha/beta hydrolase family Esterase PF00756.20 ORF107518 - 0.15 11.7 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 Putative esterase Arm PF00514.23 ORF106085 - 0.016 15.2 0.4 9.9 6.4 0.1 3.5 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat GRA6 PF05084.13 ORF106085 - 0.017 15.1 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Granule antigen protein (GRA6) DnaJ PF00226.31 ORF10422 - 1.8e-19 69.6 0.6 4.4e-19 68.4 0.2 1.8 2 0 0 2 2 2 1 DnaJ domain MFS_1 PF07690.16 ORF102936 - 0.0042 16.1 14.2 0.0064 15.5 14.2 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily EMP70 PF02990.16 ORF102936 - 0.056 12.1 1.4 0.071 11.8 1.4 1.3 1 0 0 1 1 1 0 Endomembrane protein 70 DUF1294 PF06961.13 ORF102936 - 0.081 13.2 0.6 1.1 9.6 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1294) Mem_trans PF03547.18 ORF102936 - 0.12 10.7 0.0 0.18 10.2 0.0 1.2 1 0 0 1 1 1 0 Membrane transport protein Methyltrans_SAM PF10672.9 NODE_30970_length_703_cov_3.267964_g24511_i0reverse_frame_1 - 1.8e-15 56.9 0.0 2.1e-15 56.6 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Cons_hypoth95 PF03602.15 NODE_30970_length_703_cov_3.267964_g24511_i0reverse_frame_1 - 7e-09 35.6 0.0 2.4e-08 33.8 0.0 1.9 3 0 0 3 3 3 1 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 NODE_30970_length_703_cov_3.267964_g24511_i0reverse_frame_1 - 0.00019 22.1 0.0 0.00077 20.1 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_30970_length_703_cov_3.267964_g24511_i0reverse_frame_1 - 0.031 14.9 0.0 0.11 13.1 0.0 1.9 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_30970_length_703_cov_3.267964_g24511_i0reverse_frame_1 - 0.046 13.5 0.0 0.088 12.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_24 PF13578.6 NODE_30970_length_703_cov_3.267964_g24511_i0reverse_frame_1 - 0.061 14.4 0.0 0.2 12.7 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain SUB1_ProdP9 PF18213.1 NODE_30928_length_704_cov_57.449925_g24473_i0reverse_frame_1 - 0.035 14.0 0.6 0.069 13.0 0.6 1.4 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 HisKA_3 PF07730.13 NODE_30917_length_704_cov_99.521674_g24463_i0forward_frame_1 - 0.07 13.7 1.1 0.18 12.4 0.3 2.1 2 1 0 2 2 2 0 Histidine kinase DUF945 PF06097.11 NODE_30889_length_705_cov_2.671642_g24442_i0forward_frame_1 - 7.3e-44 150.6 0.2 8.6e-44 150.4 0.2 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF945) DUF5627 PF18620.1 NODE_30889_length_705_cov_2.671642_g24442_i0forward_frame_1 - 0.079 12.8 0.0 0.74 9.7 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5627) DUF3828 PF12883.7 NODE_30884_length_705_cov_52.944776_g24437_i0reverse_frame_1 - 0.011 16.1 1.7 0.015 15.7 0.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3828) SieB PF14163.6 NODE_30882_length_705_cov_61.874627_g23847_i1reverse_frame_1 - 1.7 8.1 7.3 3.4 7.2 7.3 1.5 1 0 0 1 1 1 0 Super-infection exclusion protein B DNA_Packaging_2 PF11123.8 NODE_30882_length_705_cov_61.874627_g23847_i1forward_frame_1 - 0.012 15.8 1.8 0.014 15.6 0.3 1.8 2 0 0 2 2 2 0 DNA packaging protein DUF1501 PF07394.12 NODE_30882_length_705_cov_61.874627_g23847_i1forward_frame_1 - 2.6 7.0 4.9 2.7 7.0 1.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1501) HEPN_RiboL-PSP PF18735.1 NODE_30882_length_705_cov_61.874627_g23847_i1forward_frame_1 - 5.7 6.8 10.8 0.39 10.6 3.7 2.0 1 1 1 2 2 2 0 RiboL-PSP-HEPN Mlo PF03094.15 NODE_30881_length_705_cov_67.728358_g24435_i0forward_frame_1 - 0.0042 15.5 2.7 0.0064 14.9 2.7 1.3 1 0 0 1 1 1 1 Mlo family Cys_knot PF00007.22 NODE_30846_length_706_cov_3.490313_g24407_i0forward_frame_2 - 0.47 10.8 8.6 0.71 10.2 1.5 2.5 2 0 0 2 2 2 0 Cystine-knot domain AMP-binding PF00501.28 NODE_30840_length_706_cov_4.137109_g24401_i0forward_frame_2 - 2.2e-23 82.6 0.1 2.8e-23 82.2 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 NODE_30840_length_706_cov_4.137109_g24401_i0forward_frame_2 - 1.5e-22 79.3 1.4 2.2e-22 78.7 1.4 1.3 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus MmgE_PrpD PF03972.14 NODE_30840_length_706_cov_4.137109_g24401_i0forward_frame_2 - 0.049 12.2 0.8 0.11 11.0 0.0 1.8 2 0 0 2 2 2 0 MmgE/PrpD family DUF1883 PF08980.10 NODE_30839_length_706_cov_6.220566_g24400_i0reverse_frame_3 - 0.055 13.4 0.1 4.5 7.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1883) CSRNP_N PF16019.5 NODE_30839_length_706_cov_6.220566_g24400_i0forward_frame_3 - 0.12 12.2 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus LAB_N PF07578.11 NODE_30839_length_706_cov_6.220566_g24400_i0forward_frame_2 - 0.056 13.5 0.1 5.1 7.3 0.1 2.4 2 0 0 2 2 2 0 Lipid A Biosynthesis N-terminal domain DUF3119 PF11317.8 NODE_30839_length_706_cov_6.220566_g24400_i0forward_frame_2 - 0.22 11.8 1.2 0.38 11.0 0.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3119) Pkinase PF00069.25 NODE_30836_length_706_cov_58.406855_g24397_i0forward_frame_2 - 5.4e-23 81.7 0.0 2.1e-22 79.7 0.0 1.8 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_30836_length_706_cov_58.406855_g24397_i0forward_frame_2 - 4.3e-10 39.3 0.0 6.9e-10 38.6 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3716 PF12511.8 NODE_30802_length_706_cov_12996.122206_g4733_i8reverse_frame_3 - 0.39 10.8 4.9 9.2 6.4 0.5 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3716) STAT6_C PF14596.6 NODE_30799_length_707_cov_2.540179_g24370_i0forward_frame_3 - 0.086 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 STAT6 C-terminal DNA_pol3_delta2 PF13177.6 NODE_30794_length_707_cov_4.004464_g24365_i0reverse_frame_3 - 4.5e-41 140.3 0.0 6.2e-41 139.9 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Isochorismatase PF00857.20 NODE_30794_length_707_cov_4.004464_g24365_i0reverse_frame_3 - 0.18 12.0 0.0 0.27 11.4 0.0 1.2 1 0 0 1 1 1 0 Isochorismatase family Transp_Tc5_C PF04236.15 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_3 - 0.028 14.8 0.0 0.041 14.2 0.0 1.3 1 0 0 1 1 1 0 Tc5 transposase C-terminal domain Apolipoprotein PF01442.18 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.0037 17.1 19.6 0.011 15.6 7.3 2.5 1 1 0 2 2 2 2 Apolipoprotein A1/A4/E domain Filament PF00038.21 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.0054 16.3 28.7 0.0069 16.0 15.1 2.1 1 1 0 2 2 2 2 Intermediate filament protein Baculo_PEP_C PF04513.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.0055 16.7 24.1 0.038 14.0 3.8 3.3 1 1 1 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus EzrA PF06160.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.012 13.8 29.9 0.016 13.4 8.3 2.5 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA Stathmin PF00836.19 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.014 15.4 10.8 0.014 15.4 10.8 2.6 2 1 0 2 2 2 0 Stathmin family CdvA PF18822.1 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.016 15.0 28.7 0.16 11.8 1.2 4.4 1 1 2 4 4 4 0 CdvA-like coiled-coil domain DUF1664 PF07889.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.017 15.2 4.0 0.017 15.2 4.0 4.0 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) YtxH PF12732.7 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.033 14.7 11.4 1.3 9.6 0.0 3.4 2 1 1 3 3 3 0 YtxH-like protein Suppressor_APC PF11414.8 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.091 12.8 10.2 0.23 11.5 0.9 3.5 2 1 2 4 4 4 0 Adenomatous polyposis coli tumour suppressor protein HSP9_HSP12 PF04119.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.18 12.2 3.2 2.5 8.6 0.1 3.3 3 1 0 3 3 2 0 Heat shock protein 9/12 Prefoldin_2 PF01920.20 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.29 11.1 32.2 1.4 8.9 12.7 3.5 2 1 1 3 3 3 0 Prefoldin subunit Muted PF14942.6 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.45 10.8 30.2 11 6.3 4.3 3.2 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein ApoLp-III PF07464.11 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.77 9.8 26.9 0.59 10.2 15.7 2.7 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Mis12 PF05859.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 1.4 9.0 18.6 0.088 12.9 1.6 3.0 2 1 1 3 3 3 0 Mis12 protein Focal_AT PF03623.13 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 2 8.4 18.9 0.11 12.4 5.6 3.0 1 1 2 3 3 3 0 Focal adhesion targeting region Exonuc_VII_L PF02601.15 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 2.4 7.7 23.4 1.2 8.6 10.0 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit DUF4407 PF14362.6 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 2.7 7.2 17.5 43 3.3 17.5 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) COG2 PF06148.11 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 2.9 8.0 21.1 0.5 10.4 1.8 3.8 2 1 2 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF883 PF05957.13 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 3.1 8.5 13.8 8.5 7.1 0.8 3.9 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) Cep57_CLD_2 PF14197.6 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 3.4 7.8 16.0 0.76 9.9 3.5 3.9 3 1 0 3 3 3 0 Centrosome localisation domain of PPC89 ApoO PF09769.9 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 4.1 7.4 12.1 6.7 6.7 0.6 3.7 1 1 3 4 4 4 0 Apolipoprotein O Prominin PF05478.11 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 8.7 4.2 25.8 0.57 8.1 11.2 2.0 1 1 1 2 2 2 0 Prominin NAD_Gly3P_dh_C PF07479.14 NODE_30782_length_707_cov_93.616071_g24354_i0forward_frame_3 - 0.041 14.2 0.1 0.074 13.3 0.1 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus zf-RanBP PF00641.18 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 1e-11 43.9 19.3 7.9e-07 28.3 2.0 3.0 3 0 0 3 3 3 2 Zn-finger in Ran binding protein and others zf-AN1 PF01428.16 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 3e-05 24.1 3.0 3e-05 24.1 3.0 4.2 4 0 0 4 4 4 1 AN1-like Zinc finger DZR PF12773.7 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.0037 17.3 8.4 0.0037 17.3 8.4 3.4 3 1 1 4 4 4 2 Double zinc ribbon IBR PF01485.21 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.025 14.8 2.9 0.025 14.8 2.9 3.2 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain Transp_Tc5_C PF04236.15 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.03 14.7 1.2 0.03 14.7 1.2 2.6 3 1 0 3 3 3 0 Tc5 transposase C-terminal domain zinc_ribbon_2 PF13240.6 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.46 10.3 11.6 1.3 8.9 0.8 3.6 3 0 0 3 3 3 0 zinc-ribbon domain C1_1 PF00130.22 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.63 10.0 0.1 0.63 10.0 0.1 4.2 2 1 2 4 4 4 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-piccolo PF05715.13 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 5.2 7.3 16.3 3.7 7.8 3.4 3.5 2 1 1 3 3 3 0 Piccolo Zn-finger PHD_2 PF13831.6 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 7.8 6.2 15.3 2.5 7.7 0.2 4.1 4 0 0 4 4 4 0 PHD-finger RAP PF08373.10 NODE_30766_length_707_cov_192.758929_g24339_i0reverse_frame_2 - 1.2e-08 34.9 0.1 2e-08 34.2 0.1 1.3 1 0 0 1 1 1 1 RAP domain KAR9 PF08580.10 NODE_30766_length_707_cov_192.758929_g24339_i0forward_frame_3 - 5.3 5.5 11.0 6.4 5.2 11.0 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks78.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks78.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks78.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks78.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SGP PF17228.2 NODE_30756_length_707_cov_615.022321_g24213_i1reverse_frame_2 - 2.5 9.0 45.5 0.079 13.8 8.9 4.5 1 1 2 3 3 3 0 Sulphur globule protein Peptidase_M14 PF00246.24 NODE_30742_length_708_cov_2.267459_g24323_i0reverse_frame_2 - 0.0014 18.5 1.3 0.0015 18.4 0.5 1.5 2 0 0 2 2 2 1 Zinc carboxypeptidase Activator-TraM PF11657.8 NODE_30737_length_708_cov_13.368499_g24318_i0reverse_frame_3 - 6.5 6.6 10.1 1.3 8.9 4.5 2.2 2 0 0 2 2 2 0 Transcriptional activator TraM Alpha_adaptinC2 PF02883.20 NODE_30735_length_708_cov_54.393759_g24316_i0forward_frame_2 - 0.15 12.3 0.1 0.24 11.7 0.1 1.2 1 0 0 1 1 1 0 Adaptin C-terminal domain HrpB7 PF09486.10 NODE_30705_length_708_cov_286.846954_g24286_i0reverse_frame_3 - 2.7 8.4 14.4 0.028 14.8 5.6 1.9 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) DUF1242 PF06842.12 NODE_30694_length_708_cov_564.481426_g24277_i0reverse_frame_2 - 1.3 8.9 7.6 0.73 9.7 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1242) WD40 PF00400.32 ORF98580 - 6.1e-07 30.0 0.1 1.2e-06 29.1 0.1 1.5 1 0 0 1 1 1 1 WD domain, G-beta repeat TrmO PF01980.16 ORF97345 - 4.6e-46 155.9 0.0 8e-46 155.1 0.0 1.4 1 0 0 1 1 1 1 tRNA-methyltransferase O TrmO_C PF18389.1 ORF97345 - 1.1e-23 83.1 0.1 1.6e-23 82.6 0.1 1.3 1 0 0 1 1 1 1 TrmO C-terminal domain adh_short PF00106.25 ORF96721 - 2.2e-25 89.3 0.0 3.6e-25 88.6 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF96721 - 1.6e-15 57.3 0.0 2.1e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Aldo_ket_red PF00248.21 ORF95063 - 6.6e-18 64.9 0.0 4.1e-16 59.0 0.0 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Ribosomal_60s PF00428.19 ORF95063 - 2.1 9.0 9.2 5.2 7.7 9.2 1.8 1 1 0 1 1 1 0 60s Acidic ribosomal protein Arf PF00025.21 ORF94933 - 2.8e-60 202.7 0.1 3.3e-60 202.5 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF94933 - 2.7e-09 36.7 0.0 3.6e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF94933 - 2.8e-09 37.2 0.0 3.9e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF94933 - 3.3e-08 33.3 0.0 3.8e-08 33.1 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF94933 - 7.4e-08 31.9 0.4 0.00012 21.4 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF94933 - 6.1e-06 25.8 0.0 7.7e-06 25.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF94933 - 0.014 15.4 0.0 0.04 14.0 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase DHHA1 PF02272.19 ORF92374 - 6.4e-33 114.1 3.2 9.2e-33 113.6 3.2 1.2 1 0 0 1 1 1 1 DHHA1 domain tRNA_SAD PF07973.14 ORF92374 - 8e-19 67.5 0.2 1.7e-18 66.5 0.2 1.6 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Leu_zip PF15294.6 ORF92374 - 0.00089 18.9 0.5 0.0012 18.5 0.5 1.1 1 0 0 1 1 1 1 Leucine zipper DUF1319 PF07028.11 ORF92374 - 0.0012 19.0 0.2 0.0017 18.6 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1319) DUF3573 PF12097.8 ORF92374 - 0.0084 15.0 0.1 0.01 14.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3573) Spc7 PF08317.11 ORF92374 - 0.029 13.3 1.1 0.037 12.9 1.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein HypA PF01155.19 ORF92374 - 0.19 11.8 0.3 0.36 10.9 0.1 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Metal_resist PF13801.6 ORF92374 - 0.86 9.8 6.6 0.66 10.2 0.7 2.2 2 0 0 2 2 2 0 Heavy-metal resistance Ribosomal_60s PF00428.19 ORF88860 - 2.7 8.6 7.4 3.3 8.4 1.0 2.4 2 0 0 2 2 2 0 60s Acidic ribosomal protein VBS PF08913.10 ORF87082 - 0.0033 17.9 0.2 0.012 16.0 0.0 1.8 2 0 0 2 2 2 1 Vinculin Binding Site DUF4116 PF13475.6 ORF85246 - 4.3e-30 103.2 0.0 2.6e-09 36.6 0.0 4.5 4 0 0 4 4 4 4 Domain of unknown function (DUF4116) Robl_LC7 PF03259.17 ORF85246 - 0.018 14.8 4.1 2.6 7.9 0.5 3.0 2 1 1 3 3 3 0 Roadblock/LC7 domain CdhD PF03599.16 ORF85246 - 0.039 12.7 0.1 0.054 12.2 0.1 1.2 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit Acetyltransf_1 PF00583.25 ORF85158 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF85158 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF85158 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF85158 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF85158 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF85158 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF85158 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF85158 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF85158 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF85158 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain Dak2 PF02734.17 ORF84496 - 1e-55 188.3 0.4 1.3e-55 188.0 0.4 1.1 1 0 0 1 1 1 1 DAK2 domain DUF2024 PF09630.10 ORF83940 - 0.19 11.6 0.1 0.35 10.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) Acetyltransf_1 PF00583.25 ORF83907 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF83907 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF83907 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF83907 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF83907 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF83907 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF83907 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF83907 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF83907 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF83907 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain Kinesin PF00225.23 ORF81912 - 1.6e-22 79.9 0.1 2.3e-22 79.4 0.1 1.3 1 0 0 1 1 1 1 Kinesin motor domain GPCR_chapero_1 PF11904.8 ORF79767 - 5.2e-19 68.8 0.1 7e-13 48.7 0.1 2.1 1 1 1 2 2 2 2 GPCR-chaperone Mob1_phocein PF03637.17 ORF79629 - 6.4e-69 231.3 3.5 7.7e-69 231.0 3.5 1.1 1 0 0 1 1 1 1 Mob1/phocein family Acetyltransf_1 PF00583.25 ORF78817 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF78817 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF78817 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF78817 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF78817 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF78817 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF78817 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF78817 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF78817 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF78817 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain DUF2024 PF09630.10 ORF77621 - 0.19 11.6 0.1 0.35 10.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) NAD_binding_4 PF07993.12 ORF7690 - 8.5e-15 54.6 0.0 1.2e-14 54.1 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 ORF7690 - 0.06 12.4 0.0 0.085 11.9 0.0 1.4 1 1 0 1 1 1 0 RmlD substrate binding domain Brix PF04427.18 ORF76896 - 5.9e-34 117.9 0.0 7e-34 117.6 0.0 1.0 1 0 0 1 1 1 1 Brix domain DUF2024 PF09630.10 ORF75346 - 0.19 11.6 0.1 0.35 10.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) PBP1_TM PF14812.6 ORF74347 - 0.00031 21.0 2.2 0.00054 20.3 2.2 1.3 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal LRR_6 PF13516.6 ORF73441 - 0.049 13.7 20.7 0.25 11.5 0.0 6.2 8 0 0 8 8 8 0 Leucine Rich repeat APH PF01636.23 ORF69497 - 7.6e-13 48.9 0.1 1.4e-12 48.1 0.1 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family EamA PF00892.20 ORF69018 - 8.1e-06 26.1 12.3 8.1e-06 26.1 12.3 2.3 2 1 0 2 2 2 1 EamA-like transporter family SLC35F PF06027.12 ORF69018 - 0.00027 20.5 4.4 0.00053 19.6 4.4 1.7 1 1 0 1 1 1 1 Solute carrier family 35 EmrE PF13536.6 ORF69018 - 0.0074 15.9 4.9 0.0088 15.7 4.9 1.3 1 1 0 1 1 1 1 Putative multidrug resistance efflux transporter DUF2024 PF09630.10 ORF68192 - 0.19 11.6 0.1 0.35 10.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) EamA PF00892.20 ORF66752 - 5.6e-06 26.6 12.1 5.6e-06 26.6 12.1 2.3 2 1 0 2 2 2 1 EamA-like transporter family SLC35F PF06027.12 ORF66752 - 0.00028 20.5 4.6 0.00058 19.5 4.6 1.7 1 1 0 1 1 1 1 Solute carrier family 35 EmrE PF13536.6 ORF66752 - 0.0075 15.9 5.0 0.009 15.6 5.0 1.3 1 1 0 1 1 1 1 Putative multidrug resistance efflux transporter Acetyltransf_1 PF00583.25 ORF63126 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF63126 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF63126 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF63126 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF63126 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF63126 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF63126 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF63126 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF63126 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF63126 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain Pkinase PF00069.25 ORF61650 - 1e-43 149.6 0.3 1.2e-43 149.4 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF61650 - 1e-22 80.7 0.1 1.2e-22 80.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF61650 - 0.0022 17.4 0.0 0.0035 16.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF61650 - 0.0071 15.7 0.0 0.079 12.3 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF61650 - 0.012 14.6 0.2 0.014 14.4 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF61650 - 0.15 10.8 0.2 0.23 10.2 0.2 1.2 1 0 0 1 1 1 0 Fungal protein kinase DsbC_N PF10411.9 ORF61650 - 0.15 11.5 0.0 0.31 10.5 0.0 1.5 1 0 0 1 1 1 0 Disulfide bond isomerase protein N-terminus Lip_A_acyltrans PF03279.13 ORF61273 - 2.5e-78 263.2 0.1 2.9e-78 263.1 0.1 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase MscS_porin PF12795.7 ORF60844 - 0.011 15.3 2.0 1.6 8.2 0.0 2.1 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain E2R135 PF11570.8 ORF60844 - 0.053 13.8 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 Coiled-coil receptor-binding R-domain of colicin E2 Ribonuclease_3 PF00636.26 ORF60844 - 0.097 13.3 0.0 0.38 11.4 0.0 2.0 1 1 0 1 1 1 0 Ribonuclease III domain DUF892 PF05974.12 ORF60844 - 0.17 11.9 1.4 4.4 7.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF892) SLAM PF06214.11 ORF59921 - 0.077 13.0 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Signaling lymphocytic activation molecule (SLAM) protein T2SS_PulS_OutS PF09691.10 ORF59921 - 0.088 13.0 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Type II secretion system pilotin lipoprotein (PulS_OutS) DUF484 PF04340.12 ORF58288 - 1.7e-89 299.4 0.4 2e-89 299.2 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF484 Ni_hydr_CYTB PF01292.20 ORF54691 - 3.6e-36 124.5 19.2 4.1e-36 124.3 19.2 1.0 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 ORF54691 - 1.7e-05 25.2 29.5 0.00076 20.0 8.9 2.6 3 0 0 3 3 3 2 Domain of unknown function (DUF4405) CopD PF05425.13 ORF54691 - 1.8 9.0 7.8 0.39 11.1 3.3 2.1 3 0 0 3 3 3 0 Copper resistance protein D Mito_carr PF00153.27 ORF54641 - 5.1e-47 157.7 1.2 2.5e-18 65.8 0.0 3.0 2 1 1 3 3 3 3 Mitochondrial carrier protein Acetyltransf_1 PF00583.25 ORF54586 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF54586 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF54586 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF54586 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF54586 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF54586 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF54586 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF54586 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF54586 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF54586 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain DUF2830 PF11125.8 ORF51175 - 0.12 12.3 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2830) Proteasome PF00227.26 ORF51073 - 6e-49 166.1 0.6 7.3e-49 165.8 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Pr_beta_C PF12465.8 ORF51073 - 1.6e-08 33.8 0.2 4.1e-08 32.5 0.0 1.8 2 0 0 2 2 2 1 Proteasome beta subunits C terminal Menin PF05053.13 ORF50121 - 0.06 11.7 7.7 0.079 11.3 7.7 1.2 1 0 0 1 1 1 0 Menin DUF1682 PF07946.14 ORF50121 - 0.13 11.4 2.4 0.2 10.9 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) EF-hand_6 PF13405.6 ORF48783 - 0.042 13.8 0.1 1.3 9.2 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain Ion_trans PF00520.31 ORF48783 - 0.043 13.1 0.2 0.056 12.7 0.2 1.2 1 0 0 1 1 1 0 Ion transport protein EF-hand_8 PF13833.6 ORF48783 - 0.048 13.5 1.2 0.24 11.3 0.2 2.4 2 0 0 2 2 2 0 EF-hand domain pair LAGLIDADG_3 PF14528.6 ORF48783 - 0.13 12.6 0.1 0.39 11.1 0.1 1.8 2 0 0 2 2 2 0 LAGLIDADG-like domain NAD_binding_11 PF14833.6 ORF48716 - 7.8e-33 113.3 0.0 1.1e-32 112.9 0.0 1.2 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NAD_binding_2 PF03446.15 ORF48716 - 1e-24 87.5 0.0 1.7e-24 86.8 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Proteasome PF00227.26 ORF46381 - 6e-49 166.1 0.6 7.3e-49 165.8 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Pr_beta_C PF12465.8 ORF46381 - 1.6e-08 33.8 0.2 4.1e-08 32.5 0.0 1.8 2 0 0 2 2 2 1 Proteasome beta subunits C terminal Na_H_Exchanger PF00999.21 ORF44510 - 1e-33 116.7 16.2 1.1e-33 116.6 16.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF4199 PF13858.6 ORF44510 - 2.7 8.4 13.6 9.9 6.5 10.2 3.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4199) DUF4064 PF13273.6 ORF44510 - 5.3 7.4 13.9 14 6.0 8.5 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) Flu_B_M2 PF04772.12 ORF44169 - 0.0021 18.3 1.6 0.0021 18.3 1.6 1.8 2 1 0 2 2 2 1 Influenza B matrix protein 2 (BM2) Nuc_N PF14448.6 ORF44169 - 0.029 14.2 0.2 0.072 12.9 0.2 1.7 1 0 0 1 1 1 0 Nuclease N terminal YrzO PF14142.6 ORF44169 - 0.34 10.8 1.8 4.2 7.3 0.4 2.7 2 0 0 2 2 2 0 YrzO-like protein RCC1_2 PF13540.6 ORF4396 - 1.7e-14 53.2 10.1 7.2e-07 28.8 0.6 3.6 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Endonuclease_1 PF04231.13 ORF41737 - 1.5e-44 152.5 7.5 2.6e-44 151.7 7.5 1.4 1 1 0 1 1 1 1 Endonuclease I CTP-dep_RFKase PF01982.16 ORF40131 - 0.0062 16.6 0.0 0.011 15.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF120 Big_10 PF17964.1 ORF40131 - 0.12 12.3 0.4 0.16 11.9 0.4 1.1 1 0 0 1 1 1 0 Bacterial Ig domain GSP_synth PF03738.14 ORF39350 - 9.2e-41 140.3 0.0 1.1e-40 140.1 0.0 1.0 1 0 0 1 1 1 1 Glutathionylspermidine synthase preATP-grasp APH PF01636.23 ORF38243 - 1e-11 45.3 0.3 2.1e-11 44.2 0.2 1.5 1 1 1 2 2 2 1 Phosphotransferase enzyme family Patched PF02460.18 ORF36919 - 6.8e-20 70.8 11.9 7.6e-20 70.6 11.9 1.0 1 0 0 1 1 1 1 Patched family HAP1_N PF04849.13 ORF36649 - 0.0017 17.6 7.8 0.0017 17.6 7.8 1.6 2 0 0 2 2 2 1 HAP1 N-terminal conserved region Uso1_p115_C PF04871.13 ORF36649 - 0.11 12.8 12.7 0.055 13.8 8.4 2.4 2 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region APG6_N PF17675.1 ORF36649 - 0.15 12.6 15.8 0.54 10.8 12.1 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region DLP_helical PF18709.1 ORF36649 - 0.25 10.5 3.5 2.1 7.5 2.7 2.0 1 1 0 1 1 1 0 Dynamin-like helical domain Endonuc_Holl PF10107.9 ORF36649 - 0.27 11.1 1.9 0.71 9.7 0.5 2.1 2 0 0 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase DUF1664 PF07889.12 ORF36649 - 0.3 11.1 2.6 5.5 7.0 0.3 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) CENP-F_leu_zip PF10473.9 ORF36649 - 0.3 11.1 14.4 0.1 12.6 9.6 2.4 3 0 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BST2 PF16716.5 ORF36649 - 0.64 10.6 8.6 0.68 10.6 6.9 2.0 2 0 0 2 2 1 0 Bone marrow stromal antigen 2 FH2 PF02181.23 ORF36649 - 0.71 8.9 4.4 0.59 9.2 3.1 1.5 2 0 0 2 2 2 0 Formin Homology 2 Domain GAS PF13851.6 ORF36649 - 1.2 8.4 10.9 1 8.6 3.1 2.9 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding ATG16 PF08614.11 ORF36649 - 1.4 9.1 21.6 0.093 13.0 12.0 2.3 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) TarH PF02203.15 ORF36649 - 2.8 7.8 8.0 29 4.5 2.6 3.0 2 1 1 3 3 3 0 Tar ligand binding domain homologue Fez1 PF06818.15 ORF36649 - 3.4 8.1 14.2 18 5.7 14.2 1.9 1 1 0 1 1 1 0 Fez1 UPF0242 PF06785.11 ORF36649 - 3.4 7.7 8.3 15 5.6 6.2 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DHR10 PF18595.1 ORF36649 - 5.7 7.0 17.3 0.35 10.9 6.2 3.1 3 0 0 3 3 3 0 Designed helical repeat protein 10 domain Swi5 PF07061.11 ORF36649 - 9 6.5 6.9 97 3.2 4.6 3.2 2 1 0 2 2 2 0 Swi5 Tropomyosin PF00261.20 ORF36649 - 9.1 5.6 17.0 2.8 7.3 4.1 2.7 3 1 1 4 4 4 0 Tropomyosin Arf PF00025.21 ORF36269 - 2.8e-60 202.7 0.1 3.3e-60 202.5 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF36269 - 2.7e-09 36.7 0.0 3.6e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF36269 - 2.8e-09 37.2 0.0 3.9e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF36269 - 3.3e-08 33.3 0.0 3.8e-08 33.1 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF36269 - 7.4e-08 31.9 0.4 0.00012 21.4 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF36269 - 6.1e-06 25.8 0.0 7.7e-06 25.4 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF36269 - 0.014 15.4 0.0 0.04 14.0 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase APOBEC_C PF05240.14 ORF34538 - 0.032 14.2 0.1 0.09 12.7 0.1 1.8 1 0 0 1 1 1 0 APOBEC-like C-terminal domain RIB43A PF05914.12 ORF33577 - 7.5e-25 87.5 39.6 8.6e-25 87.3 39.6 1.0 1 0 0 1 1 1 1 RIB43A TPH PF13868.6 ORF33577 - 0.42 9.1 52.8 0.025 13.1 19.9 2.2 2 0 0 2 2 2 0 Trichohyalin-plectin-homology domain Proteasome PF00227.26 ORF3144 - 6e-49 166.1 0.6 7.3e-49 165.8 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Pr_beta_C PF12465.8 ORF3144 - 1.6e-08 33.8 0.2 4.1e-08 32.5 0.0 1.8 2 0 0 2 2 2 1 Proteasome beta subunits C terminal Cob_adeno_trans PF01923.18 ORF25189 - 2.2e-54 184.0 0.0 2.7e-54 183.7 0.0 1.1 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Mob1_phocein PF03637.17 ORF25140 - 1.9e-70 236.2 1.0 2.3e-70 236.0 1.0 1.1 1 0 0 1 1 1 1 Mob1/phocein family DUF5595 PF18077.1 ORF25140 - 0.35 11.0 0.1 0.35 11.0 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF5595) SIMPL PF04402.14 ORF22053 - 1.4e-44 153.0 6.9 1.6e-44 152.8 6.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF541) DUF1611_N PF17396.2 ORF22053 - 0.0027 17.9 0.1 0.019 15.2 0.0 2.2 2 1 0 2 2 2 1 Domain of unknown function (DUF1611_N) Rossmann-like domain EF-hand_7 PF13499.6 ORF19600 - 2e-13 50.6 13.1 2.9e-07 30.8 0.5 3.4 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF19600 - 1.2e-07 30.7 7.4 0.025 14.1 0.0 4.6 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF19600 - 1.3e-05 24.8 8.8 0.79 9.8 0.0 4.9 4 1 1 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF19600 - 0.0035 17.2 5.0 5.1 7.0 0.0 4.3 3 2 2 5 5 5 2 EF-hand domain pair Ank_2 PF12796.7 ORF18277 - 4.9e-36 123.2 11.6 4.9e-13 49.5 0.2 4.0 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF18277 - 1.3e-31 108.5 6.5 6e-12 45.8 0.1 5.2 2 1 4 6 6 6 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF18277 - 1.6e-21 74.1 1.0 0.0028 18.0 0.0 6.7 7 0 0 7 7 7 5 Ankyrin repeat Ank_5 PF13857.6 ORF18277 - 1.3e-20 73.1 11.6 7.9e-09 35.6 0.0 6.1 1 1 5 6 6 6 6 Ankyrin repeats (many copies) Ank PF00023.30 ORF18277 - 4.4e-20 71.2 4.9 0.0032 17.8 0.0 6.9 7 0 0 7 7 7 5 Ankyrin repeat YlzJ PF14035.6 ORF18277 - 0.018 15.2 0.0 35 4.7 0.0 4.0 4 1 1 5 5 5 0 YlzJ-like protein Ribosomal_60s PF00428.19 ORF18065 - 2.7 8.6 7.4 3.3 8.4 1.0 2.4 2 0 0 2 2 2 0 60s Acidic ribosomal protein Proteasome PF00227.26 ORF17404 - 6e-49 166.1 0.6 7.3e-49 165.8 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Pr_beta_C PF12465.8 ORF17404 - 1.6e-08 33.8 0.2 4.1e-08 32.5 0.0 1.8 2 0 0 2 2 2 1 Proteasome beta subunits C terminal APH PF01636.23 ORF15397 - 1e-11 45.3 0.3 2.1e-11 44.2 0.2 1.5 1 1 1 2 2 2 1 Phosphotransferase enzyme family CD99L2 PF12301.8 ORF14279 - 0.045 14.0 0.7 0.066 13.5 0.7 1.2 1 0 0 1 1 1 0 CD99 antigen like protein 2 CCDC50_N PF15295.6 ORF14279 - 0.96 9.6 9.7 0.074 13.2 3.3 2.3 1 1 2 3 3 3 0 Coiled-coil domain-containing protein 50 N-terminus Vac14_Fab1_bd PF12755.7 ORF12913 - 0.0012 19.4 0.4 0.0022 18.6 0.4 1.5 1 0 0 1 1 1 1 Vacuolar 14 Fab1-binding region Urb2 PF10441.9 ORF12913 - 0.039 13.9 0.1 0.06 13.3 0.1 1.3 1 0 0 1 1 1 0 Urb2/Npa2 family HEAT_2 PF13646.6 ORF12913 - 0.042 14.2 0.5 0.39 11.1 0.1 2.4 1 1 1 2 2 2 0 HEAT repeats HEAT PF02985.22 ORF12913 - 0.12 12.7 0.0 0.12 12.7 0.0 3.5 4 1 0 4 4 4 0 HEAT repeat DUF2171 PF09939.9 ORF12908 - 1.4 9.2 4.0 0.56 10.5 0.6 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2171) DUF4829 PF16111.5 ORF12908 - 1.7 9.5 16.4 0.82 10.5 6.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4829) DUF3328 PF11807.8 ORF12908 - 5.3 6.8 6.4 0.46 10.2 1.3 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3328) Ntox5 PF15543.6 ORF106975 - 0.11 12.3 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial toxin 5 CD99L2 PF12301.8 ORF101591 - 0.045 14.0 0.7 0.066 13.5 0.7 1.2 1 0 0 1 1 1 0 CD99 antigen like protein 2 CCDC50_N PF15295.6 ORF101591 - 0.96 9.6 9.7 0.074 13.2 3.3 2.3 1 1 2 3 3 3 0 Coiled-coil domain-containing protein 50 N-terminus DUF2649 PF10854.8 NODE_31085_length_700_cov_164.666165_g22684_i1forward_frame_1 - 1.3 9.4 8.5 0.94 9.8 0.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2649) Spt20 PF12090.8 NODE_31051_length_701_cov_91.935435_g24580_i0forward_frame_1 - 1.8 8.1 12.5 3.1 7.4 12.5 1.5 1 0 0 1 1 1 0 Spt20 family LMBR1 PF04791.16 NODE_31012_length_702_cov_49.965517_g24546_i0reverse_frame_1 - 4.4 6.1 8.2 5.4 5.8 8.2 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein PsbN PF02468.15 NODE_30980_length_702_cov_1435.005997_g24517_i0reverse_frame_1 - 0.6 10.0 2.4 1.1 9.2 2.4 1.4 1 0 0 1 1 1 0 Photosystem II reaction centre N protein (psbN) RNA_pol_Rpb1_R PF05001.13 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_3 - 2.7 8.5 8.9 1.5 9.3 3.0 3.1 3 0 0 3 3 3 0 RNA polymerase Rpb1 C-terminal repeat BssS PF13991.6 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 2.7e-30 104.2 0.0 4.3e-30 103.6 0.0 1.3 1 0 0 1 1 1 1 BssS protein family DAO PF01266.24 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 3.4e-14 53.2 0.1 4.1e-14 52.9 0.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.003 16.8 0.0 0.0049 16.1 0.0 1.3 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.013 14.9 0.6 0.019 14.3 0.6 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.023 14.9 0.1 0.045 14.0 0.1 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.023 13.9 0.0 0.028 13.7 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.043 12.9 0.0 0.06 12.4 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain GIDA PF01134.22 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.043 12.9 0.1 0.056 12.5 0.1 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A 3HCDH_N PF02737.18 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.22 11.4 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 8.6e-27 93.7 0.9 8.6e-27 93.7 0.9 1.5 2 0 0 2 2 2 1 TrkA-N domain TrkA_C PF02080.21 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 3.4e-10 39.6 2.5 3.1e-09 36.5 0.4 2.9 3 0 0 3 3 3 1 TrkA-C domain NAD_binding_7 PF13241.6 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 9.1e-07 29.3 1.3 6.6e-05 23.3 0.0 2.2 1 1 1 2 2 2 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 3e-06 27.3 1.2 8.1e-06 25.9 0.6 1.9 1 1 1 2 2 2 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 2.4e-05 24.8 2.5 5.1e-05 23.8 0.4 2.6 2 1 1 3 3 2 1 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.0005 20.3 0.2 0.0012 19.1 0.1 1.7 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.0012 18.8 1.3 0.0017 18.3 0.5 1.6 1 1 1 2 2 2 1 NAD(P)H-binding NAD_binding_2 PF03446.15 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.0026 18.0 0.9 0.0049 17.0 0.6 1.8 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase GFO_IDH_MocA PF01408.22 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.0046 17.8 0.2 0.014 16.3 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_Gly3P_dh_N PF01210.23 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.0067 16.4 0.1 0.021 14.8 0.0 1.9 1 1 1 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus adh_short PF00106.25 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.014 14.8 0.4 0.032 13.7 0.4 1.8 1 1 0 1 1 1 0 short chain dehydrogenase ApbA PF02558.16 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.019 14.6 0.1 0.048 13.3 0.1 1.8 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.023 13.9 0.0 0.04 13.1 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase eIF-1a PF01176.19 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.073 12.9 0.3 5.8 6.8 0.0 3.0 3 0 0 3 3 3 0 Translation initiation factor 1A / IF-1 OAM_dimer PF16554.5 NODE_30969_length_703_cov_3.752994_g24510_i0reverse_frame_3 - 0.11 12.9 0.1 0.25 11.8 0.1 1.5 1 0 0 1 1 1 0 Dimerisation domain of d-ornithine 4,5-aminomutase Wtap PF17098.5 NODE_30965_length_703_cov_5.886228_g24506_i0reverse_frame_3 - 0.051 13.5 5.6 0.051 13.5 3.9 1.7 2 0 0 2 2 2 0 WTAP/Mum2p family WGG PF10273.9 NODE_30965_length_703_cov_5.886228_g24506_i0reverse_frame_2 - 7e-07 29.8 1.9 0.0095 16.6 0.8 2.5 1 1 1 2 2 2 2 Pre-rRNA-processing protein TSR2 TolA_bind_tri PF16331.5 NODE_30960_length_703_cov_88.333832_g24501_i0forward_frame_3 - 0.013 15.6 1.7 0.14 12.2 0.2 2.6 1 1 1 2 2 2 0 TolA binding protein trimerisation FlaC_arch PF05377.11 NODE_30960_length_703_cov_88.333832_g24501_i0forward_frame_3 - 0.029 14.7 0.1 0.029 14.7 0.1 2.9 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) Shugoshin_N PF07558.11 NODE_30960_length_703_cov_88.333832_g24501_i0forward_frame_3 - 0.13 12.1 3.8 0.15 12.0 0.1 2.7 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region DUF1664 PF07889.12 NODE_30960_length_703_cov_88.333832_g24501_i0forward_frame_3 - 0.84 9.7 6.6 2.6 8.1 0.8 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) FAM76 PF16046.5 NODE_30960_length_703_cov_88.333832_g24501_i0forward_frame_3 - 1.1 8.5 6.9 1.6 8.0 6.9 1.2 1 0 0 1 1 1 0 FAM76 protein DivIC PF04977.15 NODE_30960_length_703_cov_88.333832_g24501_i0forward_frame_3 - 1.2 8.9 6.7 2.5 7.9 0.3 2.9 3 1 0 3 3 3 0 Septum formation initiator DUF4404 PF14357.6 NODE_30960_length_703_cov_88.333832_g24501_i0forward_frame_3 - 4.4 8.0 7.6 23 5.7 1.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) SlyX PF04102.12 NODE_30960_length_703_cov_88.333832_g24501_i0forward_frame_3 - 5.2 7.8 8.8 10 6.8 0.1 2.7 2 1 1 3 3 3 0 SlyX zf-ACC PF17848.1 NODE_30929_length_704_cov_31.026906_g24474_i0reverse_frame_2 - 0.074 13.1 0.1 0.22 11.6 0.1 1.8 1 0 0 1 1 1 0 Acetyl-coA carboxylase zinc finger domain DUF3450 PF11932.8 NODE_30929_length_704_cov_31.026906_g24474_i0reverse_frame_2 - 0.1 11.9 0.0 0.23 10.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) RraB PF06877.11 NODE_30929_length_704_cov_31.026906_g24474_i0reverse_frame_2 - 0.33 11.7 1.5 9.5 7.0 0.0 3.0 3 1 0 3 3 3 0 Regulator of ribonuclease activity B DUF4202 PF13875.6 NODE_30927_length_704_cov_57.638266_g24472_i0forward_frame_2 - 0.011 15.6 0.7 0.017 15.0 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4202) Flexi_CP PF00286.20 NODE_30920_length_704_cov_95.361734_g24466_i0reverse_frame_2 - 2.8 7.9 5.8 30 4.5 2.2 2.7 2 1 0 2 2 2 0 Viral coat protein Golgin_A5 PF09787.9 NODE_30920_length_704_cov_95.361734_g24466_i0reverse_frame_2 - 9.3 5.6 18.6 0.041 13.3 4.6 2.3 1 1 1 2 2 2 0 Golgin subfamily A member 5 PseudoU_synth_2 PF00849.22 NODE_30917_length_704_cov_99.521674_g24463_i0reverse_frame_3 - 3.4e-16 59.7 0.0 4.6e-16 59.3 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase TilS PF09179.11 NODE_30917_length_704_cov_99.521674_g24463_i0reverse_frame_2 - 1.6 9.3 5.0 10 6.7 0.2 3.3 3 1 0 3 3 3 0 TilS substrate binding domain SelP_C PF04593.14 NODE_30917_length_704_cov_99.521674_g24463_i0forward_frame_2 - 0.65 10.0 6.5 0.075 13.0 2.0 1.9 2 1 0 2 2 2 0 Selenoprotein P, C terminal region Renin_r PF07850.14 NODE_30907_length_704_cov_164.354260_g24455_i0reverse_frame_3 - 0.48 11.0 0.1 0.48 11.0 0.1 2.4 2 1 0 2 2 2 0 Renin receptor-like protein DUF2987 PF11205.8 NODE_30903_length_704_cov_207.049327_g24451_i0reverse_frame_2 - 0.14 12.1 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2987) TMEM238 PF15125.6 NODE_30886_length_705_cov_3.565672_g24439_i0forward_frame_3 - 0.25 11.5 2.4 0.43 10.8 2.4 1.3 1 0 0 1 1 1 0 TMEM238 protein family Flavi_NS4A PF01350.17 NODE_30884_length_705_cov_52.944776_g24437_i0forward_frame_3 - 0.024 14.6 0.4 0.045 13.7 0.4 1.4 1 0 0 1 1 1 0 Flavivirus non-structural protein NS4A Pox_F11 PF04943.12 NODE_30882_length_705_cov_61.874627_g23847_i1reverse_frame_3 - 0.13 11.3 0.3 0.16 11.0 0.3 1.1 1 0 0 1 1 1 0 Poxvirus F11 protein Basic PF01586.16 NODE_30882_length_705_cov_61.874627_g23847_i1reverse_frame_3 - 0.43 11.8 7.2 0.9 10.8 7.2 1.5 1 0 0 1 1 1 0 Myogenic Basic domain PRP4 PF08799.11 NODE_30881_length_705_cov_67.728358_g24435_i0forward_frame_2 - 0.2 11.2 0.7 0.54 9.9 0.0 2.0 2 0 0 2 2 2 0 pre-mRNA processing factor 4 (PRP4) like Tetraspanin PF00335.20 ORF99784 - 0.035 13.8 0.1 0.055 13.2 0.1 1.3 1 0 0 1 1 1 0 Tetraspanin family IL10 PF00726.17 ORF99784 - 0.083 12.4 0.1 0.13 11.8 0.1 1.4 1 0 0 1 1 1 0 Interleukin 10 PBP1_TM PF14812.6 ORF99784 - 0.12 12.8 4.0 1.6 9.2 1.2 2.6 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal FtsL PF04999.13 ORF99784 - 0.15 12.1 0.0 0.31 11.1 0.0 1.5 1 0 0 1 1 1 0 Cell division protein FtsL TetR_N PF00440.23 ORF96827 - 4e-08 32.9 0.1 4e-08 32.9 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1 PF01527.20 ORF96827 - 0.0081 16.5 0.0 1.5 9.2 0.0 3.1 3 0 0 3 3 3 1 Transposase TetR_C_15 PF17918.1 ORF96827 - 0.011 16.5 2.8 0.011 16.5 2.8 2.0 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Ureide_permease PF07168.11 ORF96802 - 1.1 7.9 4.2 1.5 7.5 4.2 1.3 1 0 0 1 1 1 0 Ureide permease CPSF100_C PF13299.6 ORF96802 - 2.8 8.1 9.2 5.1 7.2 9.2 1.5 1 1 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal CSRNP_N PF16019.5 ORF96802 - 7.7 6.4 10.0 11 5.8 10.0 1.3 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus NAD_binding_10 PF13460.6 ORF9566 - 0.017 15.0 0.0 4.4 7.2 0.0 2.2 1 1 1 2 2 2 0 NAD(P)H-binding DUF5065 PF16723.5 ORF94793 - 0.3 11.1 2.2 0.31 11.1 0.9 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5065) TSC22 PF01166.18 ORF94632 - 0.034 14.5 0.1 0.073 13.4 0.1 1.5 1 0 0 1 1 1 0 TSC-22/dip/bun family WES_acyltransf PF03007.16 ORF93504 - 3.3e-09 36.9 0.0 4.7e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Band_7_1 PF13421.6 ORF93504 - 0.01 15.6 0.1 0.013 15.3 0.1 1.3 1 0 0 1 1 1 0 SPFH domain-Band 7 family Kelch_2 PF07646.15 ORF93504 - 0.029 14.3 0.0 0.17 11.9 0.0 2.3 2 1 0 2 2 2 0 Kelch motif RR_TM4-6 PF06459.12 ORF92652 - 0.12 12.2 7.7 0.16 11.8 7.7 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Med3 PF11593.8 ORF92652 - 1.8 7.7 22.8 2.8 7.0 22.8 1.4 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF3807 PF12720.7 ORF92652 - 2.9 8.1 9.4 4.2 7.6 9.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Spore_III_AF PF09581.10 ORF92652 - 4.9 7.1 6.5 8.7 6.3 6.5 1.3 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) GREB1 PF15782.5 ORF92652 - 5 4.1 6.2 6 3.8 6.2 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Spore_coat_CotO PF14153.6 ORF92652 - 7.3 6.5 15.0 14 5.6 15.0 1.4 1 0 0 1 1 1 0 Spore coat protein CotO Menin PF05053.13 ORF92652 - 8.8 4.5 11.1 10 4.3 11.1 1.0 1 0 0 1 1 1 0 Menin Dynein_C PF18199.1 ORF92357 - 6.4e-37 127.4 0.0 7.1e-37 127.3 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain DUF2087 PF09860.9 ORF92329 - 4.9e-08 33.0 0.0 7.5e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2087) DUF4606 PF15379.6 ORF92329 - 0.1 12.9 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4606) Thioredoxin_6 PF13848.6 ORF9105 - 7.9e-06 25.9 0.0 1.5e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Ureide_permease PF07168.11 ORF90438 - 1.1 7.9 4.2 1.5 7.5 4.2 1.3 1 0 0 1 1 1 0 Ureide permease CPSF100_C PF13299.6 ORF90438 - 2.8 8.1 9.2 5.1 7.2 9.2 1.5 1 1 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal CSRNP_N PF16019.5 ORF90438 - 7.7 6.4 10.0 11 5.8 10.0 1.3 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Cellulase PF00150.18 ORF89713 - 0.074 12.5 0.0 0.2 11.1 0.0 1.6 2 0 0 2 2 2 0 Cellulase (glycosyl hydrolase family 5) DUF1926 PF09095.11 ORF88831 - 0.041 13.5 0.8 0.056 13.1 0.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1926) PgaD PF13994.6 ORF87871 - 0.029 14.4 0.0 0.053 13.6 0.0 1.4 1 0 0 1 1 1 0 PgaD-like protein CDC50 PF03381.15 ORF87606 - 4.6e-46 157.6 2.8 5.3e-46 157.4 2.8 1.0 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Glyco_tran_28_C PF04101.16 ORF86774 - 8.3e-07 29.1 0.0 1.6e-06 28.2 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_4 PF13692.6 ORF86774 - 9.8e-05 22.8 0.1 0.00014 22.3 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 ORF86774 - 0.0061 16.1 0.0 0.0085 15.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_tran_WecB PF03808.13 ORF86774 - 0.13 12.2 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family PK_C PF02887.16 ORF86774 - 0.14 12.4 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain Kinesin PF00225.23 ORF8626 - 4.9e-60 203.2 2.2 5.7e-60 203.0 2.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF8626 - 0.00014 21.8 0.0 0.00027 20.9 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding DUF4317 PF14199.6 ORF85056 - 0.01 15.0 0.2 0.014 14.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4317) Forkhead_N PF08430.12 ORF85056 - 0.66 10.6 26.8 1 10.0 26.8 1.3 1 0 0 1 1 1 0 Forkhead N-terminal region Ish1 PF10281.9 ORF83125 - 0.15 12.4 0.4 0.15 12.4 0.4 1.8 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein PTPLA PF04387.14 ORF80901 - 2.2e-31 108.8 4.7 2.2e-31 108.8 4.7 1.6 2 0 0 2 2 2 1 Protein tyrosine phosphatase-like protein, PTPLA DUF1624 PF07786.12 ORF80901 - 0.095 12.2 8.1 0.044 13.3 5.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1624) GST_N PF02798.20 ORF78256 - 2e-15 56.9 0.0 3.1e-15 56.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF78256 - 4.1e-11 43.1 0.0 7.4e-11 42.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF78256 - 7.1e-07 29.4 0.0 1.3e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF78256 - 0.00027 21.1 0.0 0.00069 19.8 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF78256 - 0.039 14.0 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF78256 - 0.11 12.7 0.0 0.33 11.2 0.0 1.9 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain CDC27 PF09507.10 ORF76933 - 0.085 12.2 6.7 0.1 12.0 6.7 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 SOG2 PF10428.9 ORF76933 - 0.91 8.7 12.8 1.1 8.3 12.8 1.3 1 0 0 1 1 1 0 RAM signalling pathway protein Med13_C PF06333.12 ORF76933 - 2.8 7.1 11.8 3.8 6.7 11.8 1.3 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain PP2C PF00481.21 ORF76479 - 1.1e-48 166.2 0.1 3.8e-36 125.0 0.0 2.0 1 1 1 2 2 2 2 Protein phosphatase 2C SLATT_5 PF18160.1 ORF76479 - 0.0017 17.7 0.2 0.0024 17.2 0.2 1.1 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 5 ATP-synt_10 PF05176.14 ORF76479 - 0.02 14.1 0.0 0.026 13.8 0.0 1.2 1 0 0 1 1 1 0 ATP10 protein PP2C_2 PF13672.6 ORF76479 - 0.025 14.2 0.0 0.042 13.5 0.0 1.3 1 1 0 1 1 1 0 Protein phosphatase 2C Pkinase PF00069.25 ORF73793 - 2e-19 70.0 0.0 2.4e-19 69.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73793 - 3.5e-11 42.9 0.0 4.6e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF73793 - 1.2e-08 34.2 0.0 1.6e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF73793 - 0.0001 22.3 0.0 0.00024 21.1 0.0 1.6 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF73793 - 0.0065 15.8 0.0 0.012 15.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family DnaJ PF00226.31 ORF72648 - 5.2e-20 71.3 0.9 1.3e-19 70.1 0.7 1.8 2 0 0 2 2 2 1 DnaJ domain Armet PF10208.9 ORF72648 - 1.2e-05 25.2 0.6 3.1e-05 23.9 0.3 1.7 2 0 0 2 2 2 1 Degradation arginine-rich protein for mis-folding SAP PF02037.27 ORF72648 - 0.014 15.1 1.8 1.3 8.9 0.9 2.7 2 0 0 2 2 2 0 SAP domain DUF1192 PF06698.11 ORF72648 - 0.015 15.4 0.0 0.068 13.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) RGCC PF15151.6 ORF72648 - 0.072 13.3 0.3 0.57 10.4 0.0 2.0 2 0 0 2 2 2 0 Response gene to complement 32 protein family betaPIX_CC PF16523.5 ORF67678 - 0.1 12.5 0.2 0.17 11.8 0.2 1.3 1 0 0 1 1 1 0 betaPIX coiled coil Acylphosphatase PF00708.18 ORF67504 - 0.11 12.9 0.0 0.2 12.1 0.0 1.4 1 0 0 1 1 1 0 Acylphosphatase Leu_Phe_trans PF03588.14 ORF66732 - 2e-70 235.7 0.0 2.3e-70 235.5 0.0 1.0 1 0 0 1 1 1 1 Leucyl/phenylalanyl-tRNA protein transferase Acetyltransf_6 PF13480.7 ORF66732 - 0.024 14.8 0.3 0.16 12.1 0.3 2.1 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Asp PF00026.23 ORF66163 - 5.4e-10 39.2 0.0 6.2e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp PF00026.23 ORF65650 - 8.1e-24 84.6 0.0 9.4e-24 84.4 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease GST_N PF02798.20 ORF65422 - 2.9e-14 53.2 0.1 4.7e-14 52.5 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF65422 - 1.7e-12 47.5 0.0 3e-12 46.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF65422 - 6e-06 26.4 0.0 1.2e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF65422 - 1.2e-05 25.5 0.0 2.1e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF65422 - 0.013 15.7 0.0 0.025 14.8 0.0 1.7 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF65422 - 0.017 15.1 0.0 0.039 14.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain UPF0300 PF08594.10 ORF65422 - 0.16 11.2 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) GerPE PF10970.8 ORF64245 - 0.069 13.3 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 Spore germination protein GerPE Porin_1 PF00267.21 ORF62718 - 1.2e-85 287.9 14.8 1.4e-85 287.8 14.8 1.0 1 0 0 1 1 1 1 Gram-negative porin Porin_4 PF13609.6 ORF62718 - 1.2e-10 41.7 23.0 1.7e-10 41.2 23.0 1.1 1 0 0 1 1 1 1 Gram-negative porin OMP_b-brl PF13505.6 ORF62718 - 0.0033 17.6 25.2 0.026 14.6 25.2 2.0 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain MORN PF02493.20 ORF61980 - 0.00013 21.6 5.3 0.0089 15.9 0.2 4.2 5 0 0 5 5 5 2 MORN repeat HEPN_RnaseLS PF18869.1 ORF61980 - 0.029 14.5 0.1 0.16 12.0 0.0 2.2 1 1 2 3 3 3 0 RnaseLS-like HEPN MMR_HSR1 PF01926.23 ORF61633 - 2.4e-24 85.6 0.0 4e-24 84.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF61633 - 5.1e-09 35.8 0.0 5.6e-08 32.5 0.0 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B Gtr1_RagA PF04670.12 ORF61633 - 0.003 17.0 0.0 0.0042 16.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region ATP_bind_1 PF03029.17 ORF61633 - 0.0051 16.6 0.0 2.6 7.8 0.0 2.3 1 1 1 2 2 2 2 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF61633 - 0.014 14.4 0.1 0.7 8.8 0.0 2.1 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1_Xtn PF16897.5 ORF61633 - 0.051 13.6 0.0 0.087 12.8 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain RsgA_GTPase PF03193.16 ORF61633 - 0.093 12.6 0.0 0.79 9.6 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase cobW PF02492.19 ORF61633 - 0.15 11.7 0.0 1.4 8.5 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain LRR_4 PF12799.7 ORF60368 - 0.00038 20.8 8.3 0.66 10.5 0.7 4.0 3 1 1 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF60368 - 0.00039 20.1 5.0 0.16 11.8 1.2 3.7 3 1 1 4 4 4 2 Leucine rich repeat UDPGT PF00201.18 ORF60138 - 1.3e-12 47.3 0.0 1.6e-12 47.0 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF60138 - 2.4e-06 27.7 0.0 4.1e-06 26.9 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Ribosomal_L1 PF00687.21 ORF58831 - 1.7e-52 178.1 0.2 2.2e-52 177.8 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family betaPIX_CC PF16523.5 ORF58580 - 0.1 12.5 0.2 0.17 11.8 0.2 1.3 1 0 0 1 1 1 0 betaPIX coiled coil CEP19 PF14933.6 ORF57866 - 3.1e-19 69.9 15.1 3.1e-19 69.9 15.1 2.3 2 1 0 2 2 2 1 CEP19-like protein ATP-synt_ab PF00006.25 ORF55678 - 6.8e-15 55.3 0.1 9.3e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain NACHT PF05729.12 ORF55678 - 0.085 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 NACHT domain Ion_trans PF00520.31 ORF54390 - 0.0013 18.0 7.7 0.0016 17.7 7.7 1.2 1 0 0 1 1 1 1 Ion transport protein DUF4271 PF14093.6 ORF54390 - 0.044 13.7 3.9 0.09 12.7 3.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) DUF1917 PF08939.10 ORF54390 - 0.046 13.6 1.7 0.064 13.2 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1917) CLZ PF16526.5 ORF54390 - 0.23 11.8 5.6 1.4 9.3 0.4 2.9 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF3800 PF12686.7 ORF54390 - 3 8.5 5.0 0.89 10.2 0.6 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3800) AcrZ PF10766.9 ORF54390 - 7.6 6.2 7.6 0.35 10.5 1.0 2.1 2 0 0 2 2 2 0 Multidrug efflux pump-associated protein AcrZ betaPIX_CC PF16523.5 ORF52418 - 0.1 12.5 0.2 0.17 11.8 0.2 1.3 1 0 0 1 1 1 0 betaPIX coiled coil Glyco_transf_10 PF00852.19 ORF499 - 5e-45 153.4 0.0 6e-45 153.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 10 (fucosyltransferase) C-term Tsg PF04668.12 ORF499 - 0.07 13.8 0.1 0.13 13.0 0.1 1.4 1 0 0 1 1 1 0 Twisted gastrulation (Tsg) protein conserved region Occludin_ELL PF07303.13 ORF48483 - 9 7.1 17.8 0.19 12.5 9.5 2.4 2 2 0 2 2 2 0 Occludin homology domain SAP PF02037.27 ORF48298 - 1.4e-07 31.1 0.1 2.5e-07 30.3 0.1 1.5 1 0 0 1 1 1 1 SAP domain DUF2761 PF10959.8 ORF48298 - 0.18 11.8 0.0 0.4 10.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2761) HTH_Tnp_4 PF13613.6 ORF48270 - 0.00039 20.1 0.9 7.2 6.4 0.0 3.6 3 0 0 3 3 3 3 Helix-turn-helix of DDE superfamily endonuclease zf-RING_12 PF17976.1 ORF48270 - 0.0021 18.3 6.8 2 8.7 0.0 4.4 3 2 2 5 5 5 2 RING/Ubox like zinc-binding domain DUF2083 PF09856.9 ORF48270 - 0.0085 16.0 0.6 2.4 8.0 0.0 2.9 3 0 0 3 3 3 2 Predicted transcriptional regulator (DUF2083) HXXEE PF13787.6 ORF48270 - 0.063 14.1 0.1 94 3.9 0.0 3.1 2 1 1 3 3 3 0 Protein of unknown function with HXXEE motif Flu_M1 PF00598.19 ORF48270 - 0.097 12.2 0.0 5.8 6.4 0.0 2.4 2 0 0 2 2 2 0 Influenza Matrix protein (M1) DDE_Tnp_IS66_C PF13817.6 ORF48270 - 0.13 12.5 0.0 23 5.3 0.0 2.6 2 0 0 2 2 2 0 IS66 C-terminal element Aldolase PF01081.19 ORF47664 - 1.1e-20 73.9 0.0 1.4e-20 73.6 0.0 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase Thioredoxin_13 PF18401.1 ORF47664 - 0.055 13.4 0.0 0.085 12.8 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain CheB_methylest PF01339.17 ORF47075 - 1.5e-62 210.3 0.2 1.8e-62 210.0 0.2 1.1 1 0 0 1 1 1 1 CheB methylesterase SPRY PF00622.28 ORF45760 - 0.0014 18.7 0.0 0.0023 18.0 0.0 1.3 1 0 0 1 1 1 1 SPRY domain Proteasome PF00227.26 ORF45020 - 2.6e-57 193.4 0.1 3.1e-57 193.2 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF45020 - 0.0012 18.4 2.4 0.0013 18.3 0.0 2.1 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Ureide_permease PF07168.11 ORF38518 - 1.1 7.9 4.2 1.5 7.5 4.2 1.3 1 0 0 1 1 1 0 Ureide permease CPSF100_C PF13299.6 ORF38518 - 2.8 8.1 9.2 5.1 7.2 9.2 1.5 1 1 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal CSRNP_N PF16019.5 ORF38518 - 7.7 6.4 10.0 11 5.8 10.0 1.3 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus MatE PF01554.18 ORF37895 - 3.2e-11 43.1 11.8 4.4e-11 42.7 11.0 1.6 1 1 1 2 2 2 1 MatE Oxidored_q6 PF01058.22 ORF32492 - 1.5e-19 70.1 0.0 2.3e-19 69.5 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit FAM75 PF14650.6 ORF32041 - 0.61 9.6 12.5 0.84 9.1 12.5 1.1 1 0 0 1 1 1 0 FAM75 family DHHC PF01529.20 ORF32041 - 3.9 7.6 8.2 1.7 8.8 3.4 2.1 2 0 0 2 2 2 0 DHHC palmitoyltransferase ADH_zinc_N PF00107.26 ORF30531 - 7.9e-21 74.4 0.1 1.3e-20 73.7 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF30531 - 0.00042 21.4 0.0 0.00082 20.4 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase TrkA_N PF02254.18 ORF30531 - 0.0017 18.6 0.0 0.003 17.8 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain MinC_C PF03775.16 ORF30531 - 0.0076 16.2 1.3 0.11 12.5 0.2 2.2 2 0 0 2 2 2 1 Septum formation inhibitor MinC, C-terminal domain 2-Hacid_dh_C PF02826.19 ORF30531 - 0.024 14.0 0.1 0.044 13.1 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Met_10 PF02475.16 ORF30531 - 0.034 13.9 0.0 0.068 12.9 0.0 1.4 1 1 0 1 1 1 0 Met-10+ like-protein CLLAC PF15675.5 ORF30531 - 0.84 9.2 3.5 1.6 8.4 3.5 1.4 1 0 0 1 1 1 0 CLLAC-motif containing domain FAM124 PF15067.6 ORF29010 - 0.18 11.4 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 FAM124 family PDZ_6 PF17820.1 ORF27697 - 0.023 14.6 0.1 0.55 10.1 0.0 2.3 2 0 0 2 2 2 0 PDZ domain FHA PF00498.26 ORF27537 - 3.5e-13 49.7 0.0 5.7e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF27537 - 0.00049 20.4 0.0 0.0009 19.5 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Cwf_Cwc_15 PF04889.12 ORF24500 - 7.7e-54 183.0 28.0 8.7e-54 182.9 28.0 1.0 1 0 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein PA26 PF04636.13 ORF24500 - 0.11 11.4 7.7 0.12 11.3 7.7 1.3 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) 2Fe-2S_thioredx PF01257.19 ORF21803 - 0.086 12.7 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like [2Fe-2S] ferredoxin LMBR1 PF04791.16 ORF21803 - 0.58 9.0 7.5 0.69 8.7 7.5 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Pentapeptide PF00805.22 ORF211 - 5.9e-38 128.1 22.7 4.7e-07 29.3 0.4 7.1 2 2 4 8 8 8 8 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF211 - 3.6e-22 78.3 2.1 4.4e-06 26.8 0.0 3.8 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF211 - 4.2e-15 55.6 0.0 0.0074 16.4 0.1 5.6 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) XFP PF03894.15 ORF20383 - 0.029 14.1 0.4 5.6 6.6 0.0 2.2 2 0 0 2 2 2 0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase betaPIX_CC PF16523.5 ORF20269 - 0.1 12.5 0.2 0.17 11.8 0.2 1.3 1 0 0 1 1 1 0 betaPIX coiled coil Ureide_permease PF07168.11 ORF1894 - 1.1 7.9 4.2 1.5 7.5 4.2 1.3 1 0 0 1 1 1 0 Ureide permease CPSF100_C PF13299.6 ORF1894 - 2.8 8.1 9.2 5.1 7.2 9.2 1.5 1 1 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal CSRNP_N PF16019.5 ORF1894 - 7.7 6.4 10.0 11 5.8 10.0 1.3 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus GST_N PF02798.20 ORF16744 - 1e-16 61.0 0.1 1.6e-16 60.4 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF16744 - 3.8e-14 52.8 0.0 6.3e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF16744 - 1.7e-07 31.4 0.0 3e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF16744 - 3.4e-05 24.0 0.0 7.7e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF16744 - 0.035 14.1 0.0 0.091 12.8 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF16744 - 0.061 13.5 0.0 0.19 12.0 0.0 1.9 1 1 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF16744 - 0.063 13.5 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 Glutaredoxin Yop-YscD_cpl PF16697.5 ORF14215 - 0.021 15.1 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain ABC2_membrane PF01061.24 ORF14182 - 1.2e-41 142.5 15.3 1.2e-41 142.5 15.3 1.6 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF14182 - 2.5e-13 49.9 12.6 3.2e-13 49.5 12.6 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein EF-hand_8 PF13833.6 ORF112073 - 0.0011 18.8 0.0 0.0021 17.8 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF112073 - 0.0044 16.9 0.0 0.08 12.9 0.0 2.7 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF112073 - 0.0072 15.8 0.0 0.018 14.5 0.0 1.7 1 0 0 1 1 1 1 EF hand EF-hand_9 PF14658.6 ORF112073 - 0.0075 16.6 0.0 0.017 15.4 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF112073 - 0.021 15.3 0.0 0.055 13.9 0.0 1.7 1 0 0 1 1 1 0 EF-hand domain pair DUF1265 PF06887.14 ORF109712 - 0.5 10.4 4.0 3.8 7.6 4.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1265) Gal_Lectin PF02140.18 ORF109712 - 9.8 6.7 8.6 25 5.4 0.6 2.5 2 1 0 2 2 2 0 Galactose binding lectin domain EF-hand_8 PF13833.6 ORF105140 - 0.0011 18.8 0.0 0.0021 17.8 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF105140 - 0.0044 16.9 0.0 0.08 12.9 0.0 2.7 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF105140 - 0.0072 15.8 0.0 0.018 14.5 0.0 1.7 1 0 0 1 1 1 1 EF hand EF-hand_9 PF14658.6 ORF105140 - 0.0075 16.6 0.0 0.017 15.4 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF105140 - 0.021 15.3 0.0 0.055 13.9 0.0 1.7 1 0 0 1 1 1 0 EF-hand domain pair Ureide_permease PF07168.11 ORF105031 - 1.1 7.9 4.2 1.5 7.5 4.2 1.3 1 0 0 1 1 1 0 Ureide permease CPSF100_C PF13299.6 ORF105031 - 2.8 8.1 9.2 5.1 7.2 9.2 1.5 1 1 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal CSRNP_N PF16019.5 ORF105031 - 7.7 6.4 10.0 11 5.8 10.0 1.3 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus UFD1 PF03152.14 ORF105018 - 1.4e-55 187.4 0.0 1.7e-55 187.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 NHL PF01436.21 ORF104466 - 3.4e-19 67.8 2.8 5.3e-05 23.1 0.0 5.3 5 0 0 5 5 5 4 NHL repeat SGL PF08450.12 ORF104466 - 3.3e-05 23.6 0.0 0.00012 21.8 0.0 1.9 1 1 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region PQQ_3 PF13570.6 ORF104466 - 0.02 15.4 6.2 8.8 7.0 0.0 4.8 3 1 2 5 5 5 0 PQQ-like domain DUF4431 PF14485.6 ORF104466 - 0.21 11.4 0.1 9.6 6.1 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4431) MIP PF00230.20 ORF10168 - 3.2e-28 99.0 1.6 3.8e-28 98.7 1.6 1.1 1 0 0 1 1 1 1 Major intrinsic protein adh_short PF00106.25 ORF101435 - 3.8e-15 55.9 0.1 7.7e-14 51.6 0.0 2.0 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF101435 - 3.9e-10 39.7 0.1 6e-10 39.1 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Proteasome PF00227.26 ORF100032 - 2.6e-57 193.4 0.1 3.1e-57 193.2 0.1 1.0 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF100032 - 0.00032 20.3 2.1 0.00042 19.9 0.0 2.1 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature ASRT PF07100.11 NODE_31176_length_698_cov_106.025641_g24686_i0forward_frame_1 - 0.12 12.4 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Anabaena sensory rhodopsin transducer Glyco_hydro_38N PF01074.22 NODE_31155_length_698_cov_1039.461538_g12620_i7forward_frame_1 - 3.6e-59 200.5 5.6 4e-59 200.4 5.6 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Polysacc_deac_1 PF01522.21 NODE_31155_length_698_cov_1039.461538_g12620_i7forward_frame_1 - 0.00031 20.6 0.1 0.00048 20.0 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 NODE_31155_length_698_cov_1039.461538_g12620_i7forward_frame_1 - 0.024 13.8 0.1 0.029 13.6 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 Nramp PF01566.18 NODE_31146_length_699_cov_3.373494_g24663_i0forward_frame_1 - 8.9e-49 166.4 7.7 1.5e-48 165.6 7.7 1.4 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein DUF2043 PF09740.9 NODE_31132_length_699_cov_135.783133_g21370_i1forward_frame_1 - 0.0028 18.3 0.1 0.0053 17.4 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2043) OAR PF03826.17 NODE_31106_length_700_cov_1.968421_g24630_i0forward_frame_2 - 0.091 12.6 0.0 0.22 11.4 0.0 1.7 1 0 0 1 1 1 0 OAR domain Nucleoporin_FG2 PF15967.5 NODE_31085_length_700_cov_164.666165_g22684_i1reverse_frame_3 - 0.31 9.5 0.4 0.39 9.2 0.4 1.1 1 0 0 1 1 1 0 Nucleoporin FG repeated region ABC_sub_bind PF04392.12 NODE_31080_length_700_cov_198.813534_g24606_i0reverse_frame_3 - 0.047 12.9 0.0 0.079 12.2 0.0 1.3 1 0 0 1 1 1 0 ABC transporter substrate binding protein Ras PF00071.22 NODE_31080_length_700_cov_198.813534_g24606_i0reverse_frame_2 - 2.7e-35 121.4 0.1 4.1e-35 120.8 0.1 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_31080_length_700_cov_198.813534_g24606_i0reverse_frame_2 - 1.1e-18 67.6 0.0 2.1e-18 66.6 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_31080_length_700_cov_198.813534_g24606_i0reverse_frame_2 - 4e-11 42.7 0.1 5.7e-11 42.2 0.1 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 NODE_31080_length_700_cov_198.813534_g24606_i0reverse_frame_2 - 0.00031 20.3 0.0 0.00077 19.1 0.0 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 NODE_31080_length_700_cov_198.813534_g24606_i0reverse_frame_2 - 0.075 12.6 0.0 0.13 11.8 0.0 1.4 1 1 0 1 1 1 0 Ferrous iron transport protein B PRIMA1 PF16101.5 NODE_31067_length_700_cov_472.383459_g24594_i0reverse_frame_2 - 0.12 12.4 0.2 0.23 11.5 0.1 1.6 1 1 0 1 1 1 0 Proline-rich membrane anchor 1 NuA4 PF09340.10 NODE_31066_length_700_cov_714.966917_g24593_i0forward_frame_3 - 0.058 13.3 0.3 0.67 9.9 0.0 2.3 2 1 0 2 2 2 0 Histone acetyltransferase subunit NuA4 CDC37_M PF08565.11 NODE_31054_length_701_cov_72.731231_g24582_i0forward_frame_2 - 0.03 14.3 0.2 0.066 13.1 0.2 1.6 1 0 0 1 1 1 0 Cdc37 Hsp90 binding domain SKA2 PF16740.5 NODE_31042_length_701_cov_143.001502_g24572_i0reverse_frame_3 - 0.17 11.7 4.7 0.42 10.4 4.7 1.7 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 PH_TFIIH PF08567.11 NODE_31042_length_701_cov_143.001502_g24572_i0reverse_frame_2 - 0.018 15.3 0.3 0.018 15.3 0.3 1.9 2 0 0 2 2 2 0 TFIIH p62 subunit, N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks79.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks79.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks79.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks79.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_M1 PF01433.20 ORF84197 - 3.3e-24 85.7 2.1 6.4e-24 84.7 2.1 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF84197 - 1.7e-20 74.0 0.8 3.1e-20 73.2 0.8 1.5 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF84197 - 1.4e-11 44.5 0.3 5.1e-11 42.6 0.3 2.0 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal DUF916 PF06030.12 ORF84197 - 0.043 13.9 0.1 0.088 12.9 0.1 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF916) AMP-binding PF00501.28 ORF8163 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF8163 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF8163 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF67856 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF67856 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF67856 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF64204 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF64204 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF64204 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF62654 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF62654 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF62654 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF50147 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF50147 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF50147 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain E1_dh PF00676.20 ORF48489 - 1.7e-69 234.0 0.0 2.4e-69 233.6 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component Transket_pyr PF02779.24 ORF48489 - 1.5e-39 135.5 0.0 2.4e-39 134.8 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF48489 - 4.3e-36 123.5 0.0 9.8e-36 122.4 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain DXP_synthase_N PF13292.6 ORF48489 - 5.6e-05 22.5 0.0 9.7e-05 21.7 0.0 1.3 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 ORF48489 - 0.014 15.2 0.0 0.03 14.1 0.0 1.6 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMP-binding PF00501.28 ORF46409 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF46409 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF46409 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF44600 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF44600 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF44600 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF42004 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF42004 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF42004 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF3589 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF3589 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF3589 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF21590 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF21590 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF21590 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF108925 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF108925 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF108925 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Tub PF01167.18 ORF22436 - 2.6e-82 276.2 0.0 2.6e-82 276.2 0.0 2.4 2 1 0 2 2 2 1 Tub family Glyco_hydro_72 PF03198.14 ORF48757 - 0.0017 17.7 0.0 0.0031 16.8 0.0 1.4 1 0 0 1 1 1 1 Glucanosyltransferase EB PF01683.18 ORF48757 - 0.092 13.1 20.4 0.045 14.0 5.2 2.9 2 1 0 3 3 3 0 EB module TPH PF13868.6 ORF3523 - 4.3 5.8 85.5 5.3 5.4 55.5 2.7 1 1 1 2 2 2 0 Trichohyalin-plectin-homology domain XRN_N PF03159.18 ORF82641 - 8e-19 68.0 0.6 1.2e-18 67.5 0.0 1.5 2 0 0 2 2 2 1 XRN 5'-3' exonuclease N-terminus DUF4537 PF15057.6 ORF82641 - 0.01 15.9 0.0 0.023 14.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4537) Tudor_3 PF18115.1 ORF82641 - 0.099 12.5 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 DNA repair protein Crb2 Tudor domain XRN_M PF17846.1 ORF82641 - 0.1 11.5 5.6 0.14 11.0 0.1 2.8 4 0 0 4 4 4 0 Xrn1 helical domain SMN PF06003.12 ORF82641 - 0.16 11.2 0.0 0.16 11.2 0.0 2.7 3 0 0 3 3 3 0 Survival motor neuron protein (SMN) DUF4116 PF13475.6 ORF48885 - 4.2e-25 87.2 0.0 7e-08 32.1 0.0 5.4 2 1 3 5 5 5 5 Domain of unknown function (DUF4116) KR PF08659.10 ORF48885 - 0.0004 20.3 0.0 0.0012 18.8 0.0 1.8 1 0 0 1 1 1 1 KR domain AAA_8 PF12780.7 ORF34805 - 1.1e-63 215.0 1.8 1.1e-63 215.0 1.8 2.5 2 1 0 3 3 3 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF34805 - 1.5e-28 99.8 12.3 2.3e-28 99.2 12.3 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Spc7 PF08317.11 ORF34805 - 2e-07 30.2 22.8 9.7e-07 28.0 9.2 2.3 2 0 0 2 2 2 2 Spc7 kinetochore protein DUF3552 PF12072.8 ORF34805 - 9.3e-06 25.2 32.3 5.2e-05 22.8 9.2 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3552) Exonuc_VII_L PF02601.15 ORF34805 - 0.0054 16.4 15.2 0.061 12.9 6.8 2.3 2 0 0 2 2 2 2 Exonuclease VII, large subunit UPF0242 PF06785.11 ORF34805 - 0.045 13.9 24.6 0.11 12.5 4.3 2.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Fez1 PF06818.15 ORF34805 - 0.75 10.2 20.6 0.87 10.0 3.1 2.5 2 0 0 2 2 2 0 Fez1 WXG100 PF06013.12 ORF34805 - 1.5 9.1 10.1 38 4.6 0.7 3.7 3 0 0 3 3 3 0 Proteins of 100 residues with WXG AATF-Che1 PF13339.6 ORF34805 - 4.3 8.0 16.0 0.97 10.1 2.4 3.6 2 1 1 3 3 3 0 Apoptosis antagonizing transcription factor DUF4407 PF14362.6 ORF34805 - 4.5 6.5 13.9 3.2 7.0 1.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) Jnk-SapK_ap_N PF09744.9 ORF34805 - 7.6 6.7 27.2 1.7 8.9 10.9 2.8 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 Pkinase PF00069.25 ORF95187 - 2.9e-76 256.3 0.1 2.9e-76 256.3 0.1 2.7 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95187 - 1.7e-42 145.5 0.0 3.8e-42 144.3 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF95187 - 2e-07 30.6 0.0 3.3e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF95187 - 0.00025 20.5 0.4 0.00048 19.6 0.4 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family HD_4 PF13328.6 ORF80991 - 5.2e-42 143.2 0.8 1e-41 142.3 0.8 1.5 1 0 0 1 1 1 1 HD domain RelA_SpoT PF04607.17 ORF80991 - 5.7e-36 123.3 0.8 1.4e-35 122.1 0.1 2.0 2 0 0 2 2 2 1 Region found in RelA / SpoT proteins TGS PF02824.21 ORF80991 - 8.6e-22 77.0 0.0 2.3e-21 75.6 0.0 1.8 1 0 0 1 1 1 1 TGS domain ACT_4 PF13291.6 ORF80991 - 8.9e-16 58.3 2.0 3.2e-15 56.5 1.3 2.4 2 0 0 2 2 2 1 ACT domain HD PF01966.22 ORF80991 - 7.1e-08 32.7 1.4 3.4e-07 30.5 0.2 2.6 2 1 1 3 3 3 1 HD domain TFIIS_M PF07500.14 ORF80991 - 0.034 14.6 4.4 0.041 14.4 0.1 2.9 3 1 0 3 3 3 0 Transcription factor S-II (TFIIS), central domain COX5A PF02284.16 ORF80991 - 0.063 13.3 0.1 15 5.6 0.0 2.9 2 0 0 2 2 2 0 Cytochrome c oxidase subunit Va EMC3_TMCO1 PF01956.16 ORF80991 - 0.12 12.1 0.4 0.27 10.9 0.4 1.5 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF2007 PF09413.10 ORF80991 - 0.13 12.4 0.0 1.1 9.5 0.0 2.5 2 1 0 2 2 2 0 Putative prokaryotic signal transducing protein HATPase_c PF02518.26 ORF66904 - 3e-27 95.3 0.6 1.2e-26 93.4 0.0 2.3 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 ORF66904 - 3.3e-25 88.4 0.2 1.1e-24 86.8 0.0 2.0 2 0 0 2 2 2 1 Response regulator receiver domain HATPase_c_3 PF13589.6 ORF66904 - 2e-05 24.5 0.0 4.6e-05 23.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KdpC PF02669.15 ORF66904 - 0.0022 17.8 0.4 0.016 15.1 0.0 2.2 2 0 0 2 2 2 1 K+-transporting ATPase, c chain HATPase_c_5 PF14501.6 ORF66904 - 0.018 15.0 0.0 0.061 13.2 0.0 1.8 1 0 0 1 1 1 0 GHKL domain Cullin PF00888.22 ORF6621 - 1.4e-142 476.5 20.8 2.1e-142 475.9 20.8 1.2 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF6621 - 1.7e-06 27.9 3.4 5.4e-06 26.3 1.6 2.8 2 0 0 2 2 2 1 Cullin protein neddylation domain Mad3_BUB1_I PF08311.12 ORF6621 - 0.06 13.3 1.4 0.16 11.9 0.4 2.3 2 0 0 2 2 2 0 Mad3/BUB1 homology region 1 ARL2_Bind_BART PF11527.8 ORF6621 - 4.5 7.4 9.6 0.11 12.6 0.6 2.8 3 0 0 3 3 3 0 The ARF-like 2 binding protein BART Pkinase PF00069.25 ORF45795 - 2.9e-76 256.3 0.1 2.9e-76 256.3 0.1 2.7 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45795 - 1.7e-42 145.5 0.0 3.8e-42 144.3 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF45795 - 2e-07 30.6 0.0 3.3e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF45795 - 0.00025 20.5 0.4 0.00048 19.6 0.4 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 ORF44996 - 2.9e-76 256.3 0.1 2.9e-76 256.3 0.1 2.7 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44996 - 1.7e-42 145.5 0.0 3.8e-42 144.3 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF44996 - 2e-07 30.6 0.0 3.3e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF44996 - 0.00025 20.5 0.4 0.00048 19.6 0.4 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinesin PF00225.23 ORF20053 - 3.9e-64 216.7 1.1 3.9e-64 216.7 1.1 3.0 3 1 1 4 4 4 1 Kinesin motor domain Kinesin_assoc PF16183.5 ORF20053 - 0.0048 17.1 6.0 0.0048 17.1 6.0 3.4 2 1 1 3 3 3 1 Kinesin-associated Syntaxin-6_N PF09177.11 ORF20053 - 0.016 15.7 3.1 0.016 15.7 3.1 3.9 1 1 3 4 4 4 0 Syntaxin 6, N-terminal DUF2744 PF10910.8 ORF20053 - 0.018 15.0 0.1 0.059 13.4 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2744) LRR_4 PF12799.7 ORF95532 - 1.3e-20 73.1 49.1 8.3e-08 32.4 1.9 6.5 4 1 4 8 8 8 6 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF95532 - 4.9e-16 58.7 18.1 1.3e-05 24.8 6.0 4.1 2 1 2 4 4 4 4 Leucine-rich repeat LRR_8 PF13855.6 ORF95532 - 2.6e-15 55.9 24.0 4.1e-06 26.5 6.4 6.0 4 1 0 5 5 5 3 Leucine rich repeat LRR_6 PF13516.6 ORF95532 - 0.028 14.4 17.8 13 6.2 0.0 6.4 7 0 0 7 7 7 0 Leucine Rich repeat LRR_1 PF00560.33 ORF95532 - 1 10.2 22.6 13 6.8 0.2 7.6 8 2 0 8 8 8 0 Leucine Rich Repeat DUF2937 PF11157.8 ORF6371 - 0.13 12.0 8.5 0.081 12.6 2.2 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF2937) Tropomyosin_1 PF12718.7 ORF6371 - 3.9 7.6 58.9 0.17 12.0 16.4 3.9 2 2 1 3 3 3 0 Tropomyosin like TC1 PF15063.6 ORF60740 - 6.6 6.7 21.8 2.3 8.2 0.1 5.7 3 1 2 5 5 5 0 Thyroid cancer protein 1 Anoctamin PF04547.12 ORF40925 - 2.6e-50 171.6 8.7 3.6e-50 171.1 8.7 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel EF-hand_7 PF13499.6 ORF105720 - 5.1e-22 78.1 9.2 3.5e-12 46.6 0.4 4.2 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF105720 - 8.6e-20 68.9 11.1 1.7e-05 24.4 0.1 5.8 5 0 0 5 5 5 4 EF-hand domain EF-hand_1 PF00036.32 ORF105720 - 8.7e-20 68.7 13.3 1.2e-06 27.6 0.1 5.8 6 0 0 6 6 6 4 EF hand EF-hand_5 PF13202.6 ORF105720 - 2.6e-14 52.0 11.4 0.0002 20.7 0.1 5.5 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF105720 - 4.8e-11 42.3 2.3 2e-09 37.1 0.3 5.0 4 1 1 5 5 5 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF105720 - 0.00028 20.8 1.5 0.002 18.1 0.3 3.0 2 1 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand Jag_N PF14804.6 ORF105720 - 0.059 13.7 0.1 0.29 11.5 0.1 2.2 2 0 0 2 2 1 0 Jag N-terminus RST PF12174.8 ORF105720 - 0.066 13.1 0.2 1.8 8.5 0.0 3.1 2 0 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain SPARC_Ca_bdg PF10591.9 ORF105720 - 0.071 13.4 0.3 18 5.7 0.0 3.3 3 1 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF105720 - 0.073 13.9 1.8 0.35 11.8 0.2 3.0 3 1 0 3 3 2 0 EF-hand domain EF-hand_9 PF14658.6 ORF105720 - 0.084 13.2 0.1 15 6.0 0.0 3.6 3 1 0 3 3 2 0 EF-hand domain TERF2_RBM PF16772.5 ORF105720 - 0.23 10.9 0.8 1.1 8.7 0.0 2.6 3 0 0 3 3 3 0 Telomeric repeat-binding factor 2 Rap1-binding motif EF-hand_10 PF14788.6 ORF105720 - 0.24 11.3 2.3 5.8 6.9 0.4 2.9 2 0 0 2 2 2 0 EF hand CTK3_C PF12350.8 ORF105720 - 0.42 10.8 1.6 2.9 8.1 1.0 2.7 2 1 0 2 2 2 0 CTD kinase subunit gamma CTK3 C-terminus UPF0223 PF05256.12 ORF105720 - 1.9 8.9 5.5 2.1 8.7 0.1 3.5 5 0 0 5 5 3 0 Uncharacterised protein family (UPF0223) EF-hand_14 PF17959.1 ORF105720 - 1.9 8.9 4.2 11 6.4 0.1 4.0 4 1 1 5 5 5 0 EF-hand domain EF-hand_6 PF13405.6 ORF31500 - 0.0006 19.5 0.0 0.0091 15.9 0.1 2.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF31500 - 0.0057 16.1 1.3 0.02 14.4 0.1 2.8 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF31500 - 0.0064 15.9 0.0 0.046 13.2 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF31500 - 0.055 13.9 3.8 0.24 11.9 0.0 3.6 3 2 0 3 3 3 0 EF-hand domain pair Pox_vIL-18BP PF05566.12 ORF31500 - 0.42 10.8 2.0 14 5.9 0.1 3.2 3 0 0 3 3 3 0 Orthopoxvirus interleukin 18 binding protein Syntaxin-6_N PF09177.11 ORF31500 - 0.42 11.2 18.5 0.41 11.2 4.0 3.9 2 1 1 3 3 3 0 Syntaxin 6, N-terminal Acyl-CoA_dh_2 PF08028.11 ORF31500 - 1.8 8.8 18.2 8.3 6.7 7.5 2.8 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain DegQ PF08181.11 ORF31500 - 3.8 7.7 5.5 33 4.7 0.0 3.6 3 0 0 3 3 3 0 DegQ (SacQ) family DUF4559 PF15112.6 ORF31500 - 7.5 6.1 21.7 0.52 9.9 7.9 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4559) POTRA_TamA_1 PF17243.2 ORF31500 - 7.9 6.7 6.6 50 4.1 0.1 3.9 3 0 0 3 3 3 0 POTRA domain TamA domain 1 Pkinase PF00069.25 ORF61309 - 1.9e-67 227.4 0.0 2.9e-67 226.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF61309 - 1.7e-30 106.1 0.0 2.5e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF61309 - 2.3e-09 36.9 0.4 1.1e-07 31.4 0.0 2.5 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF61309 - 3.1e-07 29.4 0.0 0.00016 21.0 0.0 3.1 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF61309 - 5.1e-07 30.0 0.8 0.00018 21.9 0.1 2.5 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF61309 - 5.1e-05 22.9 5.0 0.00034 20.3 0.0 3.2 4 0 0 4 4 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF61309 - 0.0026 17.2 0.5 0.0083 15.6 0.1 2.1 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF61309 - 0.018 14.9 0.0 0.42 10.5 0.0 2.6 2 0 0 2 2 2 0 EF-hand domain pair APH PF01636.23 ORF61309 - 0.029 14.3 1.8 0.039 13.9 0.0 2.1 3 0 0 3 3 3 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF61309 - 0.086 12.4 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase DUF1752 PF08550.10 ORF61309 - 0.086 12.7 8.8 0.69 9.8 0.6 2.7 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF1752) EF-hand_9 PF14658.6 ORF61309 - 0.14 12.5 0.0 0.43 10.9 0.0 1.8 1 0 0 1 1 1 0 EF-hand domain VHS PF00790.19 ORF94479 - 7.9e-08 32.2 4.2 1.6e-07 31.3 0.5 2.8 2 1 0 2 2 2 1 VHS domain Carboxyl_trans PF01039.22 ORF94479 - 0.37 9.4 4.2 0.61 8.6 4.2 1.3 1 0 0 1 1 1 0 Carboxyl transferase domain U-box PF04564.15 ORF70753 - 2.5e-24 85.2 0.0 7.3e-12 45.3 0.0 2.8 2 0 0 2 2 2 2 U-box domain zf-NOSIP PF15906.5 ORF70753 - 0.00019 21.5 0.0 0.0026 17.9 0.0 2.4 2 0 0 2 2 2 1 Zinc-finger of nitric oxide synthase-interacting protein Metal_resist PF13801.6 ORF70753 - 0.0033 17.6 0.5 0.0074 16.5 0.5 1.5 1 0 0 1 1 1 1 Heavy-metal resistance zf-Nse PF11789.8 ORF70753 - 0.0041 16.9 0.0 0.047 13.5 0.0 2.7 2 1 1 3 3 3 1 Zinc-finger of the MIZ type in Nse subunit Ephrin_rec_like PF07699.13 ORF77445 - 0.18 11.6 0.2 0.36 10.6 0.2 1.5 1 0 0 1 1 1 0 Putative ephrin-receptor like KCT2 PF17818.1 ORF33886 - 0.031 14.4 1.7 0.045 13.9 0.3 2.0 2 0 0 2 2 2 0 Keratinocyte-associated gene product Glyco_hydro_31 PF01055.26 ORF79897 - 1.2e-77 262.0 6.1 1.2e-77 262.0 6.1 1.5 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF79897 - 2.2e-06 27.9 0.2 5.1e-06 26.7 0.2 1.6 1 0 0 1 1 1 1 Galactose mutarotase-like NtCtMGAM_N PF16863.5 ORF79897 - 2.6e-05 24.4 0.1 7.2e-05 23.0 0.0 1.7 2 0 0 2 2 2 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase PHZA_PHZB PF03284.13 ORF79897 - 0.14 11.8 2.2 15 5.2 0.0 3.5 4 0 0 4 4 4 0 Phenazine biosynthesis protein A/B NOG1_N PF17835.1 ORF6959 - 1.4e-50 171.4 0.2 1.4e-50 171.4 0.2 2.2 2 0 0 2 2 2 1 NOG1 N-terminal helical domain NOG1 PF06858.14 ORF6959 - 2e-24 85.1 0.3 8.2e-24 83.1 0.0 2.2 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) NOGCT PF08155.11 ORF6959 - 6.9e-24 83.6 1.9 1.4e-23 82.6 0.5 2.2 2 0 0 2 2 2 1 NOGCT (NUC087) domain MMR_HSR1 PF01926.23 ORF6959 - 1.2e-16 60.8 0.0 2.8e-16 59.6 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF6959 - 6.7e-10 38.7 0.0 1.2e-09 37.8 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Ras PF00071.22 ORF6959 - 5.8e-06 26.0 0.0 1.6e-05 24.6 0.0 1.8 1 1 0 1 1 1 1 Ras family Arf PF00025.21 ORF6959 - 0.0004 19.9 0.6 0.0012 18.3 0.0 2.0 3 0 0 3 3 3 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF6959 - 0.0031 17.4 1.1 1.1 9.2 0.0 3.4 3 1 0 3 3 3 1 RsgA GTPase AIG1 PF04548.16 ORF6959 - 0.05 12.9 0.2 0.12 11.7 0.0 1.8 2 0 0 2 2 2 0 AIG1 family MeaB PF03308.16 ORF6959 - 0.079 11.9 3.1 8.8 5.2 0.0 3.1 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Ephrin_rec_like PF07699.13 ORF56032 - 0.17 11.6 0.2 0.35 10.7 0.2 1.5 1 0 0 1 1 1 0 Putative ephrin-receptor like ABC_tran PF00005.27 ORF19721 - 7.4e-50 169.0 6.9 2.8e-25 89.4 0.0 3.7 4 1 0 4 4 3 2 ABC transporter ABC_tran_Xtn PF12848.7 ORF19721 - 1.1e-28 99.1 4.4 1.1e-28 99.1 4.4 2.7 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF19721 - 2.1e-15 57.4 14.1 0.0013 18.6 0.4 4.3 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF19721 - 2.7e-09 36.8 0.7 0.025 14.0 0.0 4.3 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF19721 - 3.2e-08 33.7 0.3 0.00071 19.6 0.0 3.2 3 1 0 3 3 2 2 50S ribosome-binding GTPase ABC_tran_CTD PF16326.5 ORF19721 - 2.1e-07 31.1 10.9 2.1e-07 31.1 10.9 3.7 3 1 1 4 4 4 1 ABC transporter C-terminal domain AAA_29 PF13555.6 ORF19721 - 2.8e-06 27.0 1.2 0.035 13.8 0.1 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF19721 - 1.5e-05 24.9 1.5 0.077 12.9 0.1 2.7 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 ORF19721 - 3.2e-05 24.4 13.3 0.00018 21.9 0.2 3.6 2 2 0 3 3 2 2 AAA ATPase domain AAA_18 PF13238.6 ORF19721 - 3.5e-05 24.3 1.3 0.46 11.0 0.0 3.7 4 1 0 4 4 3 2 AAA domain Dynamin_N PF00350.23 ORF19721 - 0.00014 21.9 0.7 0.11 12.6 0.0 3.9 4 0 0 4 4 4 1 Dynamin family KAP_NTPase PF07693.14 ORF19721 - 0.00053 19.3 3.5 0.051 12.8 0.3 2.7 2 2 0 2 2 2 1 KAP family P-loop domain DUF815 PF05673.13 ORF19721 - 0.00067 18.9 1.0 1.8 7.7 0.0 3.5 2 1 1 3 3 3 1 Protein of unknown function (DUF815) RNA_helicase PF00910.22 ORF19721 - 0.00076 19.8 0.4 1.3 9.4 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_28 PF13521.6 ORF19721 - 0.0013 19.0 2.3 1.3 9.3 0.0 3.4 3 0 0 3 3 3 1 AAA domain NB-ARC PF00931.22 ORF19721 - 0.0021 17.3 0.0 0.29 10.3 0.0 2.6 2 0 0 2 2 2 1 NB-ARC domain NACHT PF05729.12 ORF19721 - 0.0025 17.8 3.3 0.54 10.1 0.2 3.0 3 0 0 3 3 3 1 NACHT domain AAA_22 PF13401.6 ORF19721 - 0.0027 18.0 2.1 5.4 7.3 0.2 3.6 3 0 0 3 3 3 0 AAA domain Zeta_toxin PF06414.12 ORF19721 - 0.0033 16.7 1.1 1 8.6 0.1 2.7 2 0 0 2 2 2 1 Zeta toxin AAA PF00004.29 ORF19721 - 0.0034 17.8 0.1 4.2 7.8 0.0 2.9 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) ATP-synt_ab PF00006.25 ORF19721 - 0.0041 16.8 0.4 0.18 11.5 0.0 2.5 3 0 0 3 3 2 1 ATP synthase alpha/beta family, nucleotide-binding domain MeaB PF03308.16 ORF19721 - 0.0062 15.6 9.8 0.2 10.6 0.1 3.2 3 0 0 3 3 3 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Val_tRNA-synt_C PF10458.9 ORF19721 - 0.0067 16.7 4.5 0.0067 16.7 4.5 2.9 3 2 0 3 3 2 1 Valyl tRNA synthetase tRNA binding arm AAA_24 PF13479.6 ORF19721 - 0.013 15.3 1.9 2.8 7.6 0.1 2.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 ORF19721 - 0.034 13.7 3.8 2.6 7.6 0.0 3.5 4 1 0 4 4 4 0 AAA domain PduV-EutP PF10662.9 ORF19721 - 0.039 13.7 1.2 4.9 6.9 0.2 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NTPase_1 PF03266.15 ORF19721 - 0.04 13.8 0.7 9.7 6.1 0.1 2.7 2 0 0 2 2 2 0 NTPase FliD_N PF02465.18 ORF19721 - 0.043 14.5 0.6 0.043 14.5 0.6 2.6 2 1 0 2 2 1 0 Flagellar hook-associated protein 2 N-terminus AAA_30 PF13604.6 ORF19721 - 0.046 13.4 4.5 4.9 6.8 0.1 3.3 3 1 0 3 3 2 0 AAA domain AAA_15 PF13175.6 ORF19721 - 0.061 13.0 0.1 0.061 13.0 0.1 4.5 4 1 1 5 5 5 0 AAA ATPase domain MobB PF03205.14 ORF19721 - 0.078 12.9 0.9 12 5.8 0.1 2.5 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B SbcCD_C PF13558.6 ORF19721 - 0.081 13.2 2.5 1.2 9.4 0.1 3.8 3 2 0 3 3 2 0 Putative exonuclease SbcCD, C subunit Roc PF08477.13 ORF19721 - 0.1 12.8 1.6 13 6.0 0.1 3.0 3 0 0 3 3 2 0 Ras of Complex, Roc, domain of DAPkinase Rad17 PF03215.15 ORF19721 - 0.13 12.2 0.2 21 5.0 0.0 2.7 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_23 PF13476.6 ORF19721 - 0.14 12.6 0.1 0.14 12.6 0.1 4.3 3 1 0 3 3 3 0 AAA domain DUF87 PF01935.17 ORF19721 - 0.14 12.2 12.1 0.68 10.0 0.1 3.7 4 0 0 4 4 4 0 Helicase HerA, central domain FeoB_N PF02421.18 ORF19721 - 0.16 11.5 0.1 20 4.7 0.1 2.5 2 0 0 2 2 2 0 Ferrous iron transport protein B DUF1192 PF06698.11 ORF19721 - 0.18 11.9 14.2 3.8 7.7 7.7 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) AAA_13 PF13166.6 ORF19721 - 0.18 10.4 17.1 1.1 7.9 6.1 3.7 4 0 0 4 4 4 0 AAA domain CLP1_P PF16575.5 ORF19721 - 0.2 11.5 0.5 24 4.6 0.1 2.8 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_5 PF07728.14 ORF19721 - 0.21 11.6 1.9 7.6 6.5 0.1 2.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF2730 PF10805.8 ORF19721 - 0.64 10.1 4.8 0.28 11.3 1.3 2.2 2 0 0 2 2 1 0 Protein of unknown function (DUF2730) DUF3287 PF11690.8 ORF19721 - 0.98 9.1 6.4 0.17 11.6 1.1 2.3 3 0 0 3 3 2 0 Protein of unknown function (DUF3287) Phlebovirus_NSM PF07246.11 ORF19721 - 1.1 8.6 4.2 1.8 7.9 4.2 1.3 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M dNK PF01712.19 ORF19721 - 1.5 8.6 5.8 19 5.0 0.0 3.2 3 0 0 3 3 3 0 Deoxynucleoside kinase AAA_33 PF13671.6 ORF19721 - 1.7 8.8 8.0 8.2 6.6 0.0 3.6 4 1 0 4 4 2 0 AAA domain MCU PF04678.13 ORF19721 - 3.6 7.6 6.7 3.2 7.8 1.7 2.4 2 0 0 2 2 2 0 Mitochondrial calcium uniporter SLX9 PF15341.6 ORF19721 - 7 7.0 13.8 1.3 9.4 8.5 2.1 2 0 0 2 2 2 0 Ribosome biogenesis protein SLX9 PTS_EIIA_2 PF00359.22 ORF109708 - 5.4e-33 113.9 0.0 9.2e-33 113.2 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PTS_EIIC PF02378.18 ORF109708 - 2.2e-20 73.0 32.7 2.2e-20 73.0 32.7 3.0 2 1 0 2 2 2 1 Phosphotransferase system, EIIC PTS_IIB PF02302.17 ORF109708 - 1.1e-09 38.8 0.0 3.3e-09 37.3 0.0 1.8 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit Clathrin PF00637.20 ORF100827 - 1.7e-12 47.4 32.0 0.0003 20.7 0.9 8.3 2 2 6 8 8 8 6 Region in Clathrin and VPS TPR_2 PF07719.17 ORF100827 - 1.1e-10 40.7 28.7 0.0018 18.2 0.8 9.6 9 1 1 10 10 9 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF100827 - 1.3e-07 31.7 23.6 0.0036 17.5 0.8 8.3 5 1 3 9 9 9 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_1 PF00515.28 ORF100827 - 2.1e-05 24.1 32.1 0.0092 15.8 0.7 8.4 10 0 0 10 10 9 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF100827 - 0.00011 22.7 20.2 2.4 9.2 0.0 9.1 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF100827 - 0.00014 21.6 17.5 0.55 10.4 0.5 7.7 8 1 0 8 8 7 2 Tetratricopeptide repeat RPN7 PF10602.9 ORF100827 - 0.0071 16.1 15.5 0.2 11.3 0.3 6.0 6 1 0 6 6 6 2 26S proteasome subunit RPN7 TPR_4 PF07721.14 ORF100827 - 0.0086 16.6 1.2 14 6.6 0.0 4.8 5 0 0 5 5 3 0 Tetratricopeptide repeat T2SSF PF00482.23 ORF100827 - 0.014 15.4 1.6 6.2 6.8 0.0 4.3 4 1 0 4 4 4 0 Type II secretion system (T2SS), protein F Mic1 PF07035.12 ORF100827 - 0.021 14.5 0.3 0.021 14.5 0.3 5.4 4 3 1 6 6 6 0 Colon cancer-associated protein Mic1-like DUF3856 PF12968.7 ORF100827 - 0.025 14.7 3.2 4.7 7.3 0.5 4.4 2 1 0 3 3 3 0 Domain of Unknown Function (DUF3856) RNA_pol_inhib PF16857.5 ORF100827 - 0.028 14.2 1.9 0.098 12.5 0.2 2.9 3 0 0 3 3 3 0 RNA polymerase inhibitor DUF2624 PF11116.8 ORF100827 - 0.032 15.1 0.1 0.17 12.8 0.1 2.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2624) TPR_8 PF13181.6 ORF100827 - 0.036 14.3 29.9 0.26 11.6 0.7 8.0 9 1 0 9 9 7 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF100827 - 0.043 14.1 0.7 0.043 14.1 0.7 7.7 9 2 0 9 9 6 0 Tetratricopeptide repeat Ank_5 PF13857.6 ORF100827 - 0.21 12.0 2.8 2.1 8.8 0.0 3.8 5 0 0 5 5 4 0 Ankyrin repeats (many copies) TPR_19 PF14559.6 ORF100827 - 0.39 11.2 30.0 0.71 10.4 0.7 9.1 7 4 3 10 10 10 0 Tetratricopeptide repeat MIT PF04212.18 ORF100827 - 0.86 9.7 28.9 2.3 8.3 1.1 6.4 6 1 0 6 6 6 0 MIT (microtubule interacting and transport) domain TPR_11 PF13414.6 ORF100827 - 0.97 9.2 18.6 16 5.3 0.3 6.6 6 1 1 7 7 7 0 TPR repeat Sel1 PF08238.12 ORF100827 - 2.3 9.0 5.6 27 5.6 0.1 4.1 4 0 0 4 4 3 0 Sel1 repeat TPR_17 PF13431.6 ORF100827 - 2.9 8.5 6.4 54 4.5 0.0 4.8 5 0 0 5 5 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF100827 - 7 7.4 16.2 1.5 9.6 0.1 5.9 8 0 0 8 8 6 0 Tetratricopeptide repeat PPR_2 PF13041.6 ORF100827 - 10 6.4 10.3 8.5 6.7 0.0 5.8 7 1 1 8 8 5 0 PPR repeat family FixQ PF05545.11 ORF78668 - 0.26 11.3 1.3 0.67 10.0 1.3 1.7 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ ABC_tran PF00005.27 ORF77029 - 4.9e-38 130.7 1.3 8.6e-38 129.9 0.0 2.1 2 0 0 2 2 2 1 ABC transporter ABC_membrane PF00664.23 ORF77029 - 8e-37 127.4 7.9 7.1e-19 68.5 2.1 2.2 2 0 0 2 2 2 2 ABC transporter transmembrane region SMC_N PF02463.19 ORF77029 - 1.3e-07 31.3 10.0 5.5e-07 29.2 0.2 3.2 3 1 1 4 4 4 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF77029 - 9.5e-05 22.7 0.2 0.00098 19.4 0.2 2.4 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF77029 - 0.00015 21.7 0.0 0.00043 20.2 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF77029 - 0.00024 20.8 0.1 0.00055 19.6 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF77029 - 0.0015 18.9 0.0 0.0034 17.8 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 ORF77029 - 0.0015 18.3 14.3 0.016 15.0 14.3 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 ORF77029 - 0.0023 17.8 2.5 0.054 13.3 0.0 3.3 2 1 1 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 ORF77029 - 0.0061 16.3 0.0 0.072 12.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_10 PF12846.7 ORF77029 - 0.0062 15.5 1.9 0.039 12.9 0.0 2.5 3 0 0 3 3 3 1 AAA-like domain AAA_25 PF13481.6 ORF77029 - 0.0069 16.0 0.3 2.5 7.6 0.1 2.5 2 0 0 2 2 2 1 AAA domain SbcCD_C PF13558.6 ORF77029 - 0.018 15.3 0.6 0.36 11.1 0.9 2.7 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit ABC_ATPase PF09818.9 ORF77029 - 0.02 13.7 0.1 0.29 9.9 0.0 2.3 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA PF00004.29 ORF77029 - 0.021 15.3 2.5 0.35 11.3 0.4 3.1 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ATP-synt_ab PF00006.25 ORF77029 - 0.029 14.0 0.1 5.6 6.6 0.0 2.3 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_7 PF12775.7 ORF77029 - 0.035 13.6 0.0 0.078 12.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region TniB PF05621.11 ORF77029 - 0.039 13.4 0.1 7.5 5.9 0.0 2.4 2 0 0 2 2 2 0 Bacterial TniB protein AAA_18 PF13238.6 ORF77029 - 0.062 13.9 0.0 0.47 11.0 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF77029 - 0.11 13.0 0.1 0.11 13.0 0.1 2.9 2 1 1 3 3 2 0 AAA domain AAA_33 PF13671.6 ORF77029 - 0.13 12.4 0.0 0.3 11.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain Coilin_N PF15862.5 ORF77029 - 0.49 10.2 6.0 0.88 9.4 6.0 1.4 1 0 0 1 1 1 0 Coilin N-terminus AAA_24 PF13479.6 ORF77029 - 0.52 10.0 4.6 1.6 8.4 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_17 PF13207.6 ORF77029 - 1.2 9.6 4.2 8.9 6.7 0.0 3.1 3 0 0 3 3 3 0 AAA domain Arm PF00514.23 ORF516 - 9.1e-47 155.7 28.4 2e-06 27.7 0.1 13.4 13 1 0 13 13 13 10 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF516 - 1.4e-08 35.0 37.7 0.004 17.6 1.1 9.2 7 4 3 11 11 10 4 HEAT-like repeat HEAT_2 PF13646.6 ORF516 - 4.2e-08 33.5 35.9 0.0014 19.0 4.9 7.2 3 2 3 7 7 7 4 HEAT repeats Atx10homo_assoc PF09759.9 ORF516 - 8.3e-08 32.2 0.0 0.018 15.0 0.0 5.0 4 2 1 5 5 5 1 Spinocerebellar ataxia type 10 protein domain Cnd1 PF12717.7 ORF516 - 1e-07 32.1 1.0 0.0001 22.4 0.0 4.2 4 2 0 4 4 4 1 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 ORF516 - 7.2e-07 28.9 13.4 0.025 14.8 0.0 8.2 8 0 0 8 8 8 2 HEAT repeat V-ATPase_H_N PF03224.14 ORF516 - 4.4e-06 26.2 0.0 0.026 13.8 0.0 2.9 1 1 0 2 2 2 2 V-ATPase subunit H Adaptin_N PF01602.20 ORF516 - 7e-06 24.9 0.1 0.02 13.5 0.1 3.7 2 1 0 2 2 2 1 Adaptin N terminal region Arm_2 PF04826.13 ORF516 - 2.3e-05 24.0 0.2 0.041 13.4 0.0 3.7 2 2 2 4 4 4 1 Armadillo-like KAP PF05804.12 ORF516 - 0.00079 17.7 0.0 0.041 12.0 0.0 2.2 1 1 1 2 2 2 1 Kinesin-associated protein (KAP) RTP1_C1 PF10363.9 ORF516 - 0.049 13.8 0.5 0.29 11.3 0.1 2.6 3 1 0 3 3 3 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF937 PF06078.11 ORF516 - 0.055 14.1 0.0 0.055 14.1 0.0 3.8 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF937) IFRD PF05004.13 ORF516 - 2.2 7.3 8.5 5.6 6.0 0.4 3.5 2 1 1 4 4 4 0 Interferon-related developmental regulator (IFRD) TPR_1 PF00515.28 ORF37956 - 2.2e-44 147.5 18.3 2.2e-08 33.6 0.0 12.4 14 0 0 14 14 13 8 Tetratricopeptide repeat TPR_2 PF07719.17 ORF37956 - 2.4e-32 108.4 31.9 0.00018 21.4 0.0 12.5 13 1 1 14 14 14 7 Tetratricopeptide repeat TPR_8 PF13181.6 ORF37956 - 4.1e-26 89.0 14.5 0.00033 20.6 0.0 11.8 12 0 0 12 12 12 5 Tetratricopeptide repeat TPR_11 PF13414.6 ORF37956 - 1.4e-19 69.4 5.0 0.079 12.7 0.0 9.6 6 3 4 10 10 10 6 TPR repeat TPR_16 PF13432.6 ORF37956 - 1.6e-14 54.2 0.3 1.6e-05 25.5 0.1 8.8 6 3 4 10 10 9 4 Tetratricopeptide repeat TPR_17 PF13431.6 ORF37956 - 2.1e-13 49.6 17.6 2.2 8.9 0.1 11.2 13 0 0 13 13 12 3 Tetratricopeptide repeat TPR_9 PF13371.6 ORF37956 - 1.8e-12 47.3 33.2 0.0036 17.4 0.2 8.4 3 3 6 9 9 9 6 Tetratricopeptide repeat TPR_14 PF13428.6 ORF37956 - 6.1e-10 39.1 44.9 0.34 11.8 2.3 10.3 5 3 5 11 11 10 5 Tetratricopeptide repeat TPR_15 PF13429.6 ORF37956 - 1.5e-07 30.9 23.1 0.033 13.4 0.1 7.2 4 3 2 7 7 7 4 Tetratricopeptide repeat TPR_10 PF13374.6 ORF37956 - 9.5e-07 28.5 21.8 0.087 12.7 0.3 7.5 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF37956 - 3.3e-06 27.3 34.2 0.26 11.6 1.3 8.1 5 3 3 8 8 6 4 Tetratricopeptide repeat TPR_7 PF13176.6 ORF37956 - 3.8e-06 26.5 10.6 1.4 9.1 0.0 6.4 7 0 0 7 7 7 3 Tetratricopeptide repeat DUF772 PF05598.11 ORF37956 - 0.031 14.3 0.0 14 5.8 0.0 3.5 3 1 1 4 4 4 0 Transposase domain (DUF772) NARP1 PF12569.8 ORF37956 - 0.038 12.9 0.0 0.038 12.9 0.0 4.9 5 0 0 5 5 5 0 NMDA receptor-regulated protein 1 H-K_ATPase_N PF09040.11 ORF37956 - 0.49 10.9 4.8 1.4 9.4 4.8 1.8 1 0 0 1 1 1 0 Gastric H+/K+-ATPase, N terminal domain TPR_19 PF14559.6 ORF37956 - 0.7 10.4 0.0 0.7 10.4 0.0 7.8 7 2 0 8 8 7 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF37956 - 0.76 10.5 0.0 0.76 10.5 0.0 6.5 8 0 0 8 8 5 0 Tetratricopeptide repeat Metallophos PF00149.28 ORF35908 - 1.8e-12 48.2 0.0 3.3e-12 47.3 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase EF-hand_7 PF13499.6 ORF35908 - 1.8e-09 37.9 0.2 1.2e-08 35.3 0.2 2.4 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF35908 - 3.5e-08 32.4 0.0 0.019 14.4 0.0 3.6 5 0 0 5 5 5 2 EF hand EF-hand_6 PF13405.6 ORF35908 - 4.5e-06 26.2 0.3 0.088 12.8 0.2 3.8 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF35908 - 0.00027 20.3 0.2 0.62 9.7 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF35908 - 0.0062 16.4 0.6 0.3 11.0 0.0 2.8 1 1 1 2 2 2 1 EF-hand domain pair Sigma54_CBD PF04963.13 ORF35908 - 0.13 12.1 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 factor, core binding domain cNMP_binding PF00027.29 ORF34853 - 1.6e-12 47.3 0.0 3.4e-12 46.3 0.0 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Corona_nucleoca PF00937.18 ORF34853 - 1.9 7.5 5.8 3.1 6.7 5.8 1.3 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Tir_receptor_C PF07489.11 ORF34853 - 1.9 8.4 6.8 9.6 6.1 4.2 2.5 2 0 0 2 2 2 0 Translocated intimin receptor (Tir) C-terminus Pkinase PF00069.25 ORF18941 - 3.3e-58 197.1 0.0 4.5e-58 196.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18941 - 7.6e-26 90.9 0.0 1.1e-25 90.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase cNMP_binding PF00027.29 ORF18941 - 7.9e-18 64.3 0.1 3.3e-13 49.5 0.1 3.9 4 0 0 4 4 4 2 Cyclic nucleotide-binding domain Kinase-like PF14531.6 ORF18941 - 9.3e-07 28.4 0.0 1.5e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF18941 - 0.00067 19.7 0.0 0.0021 18.0 0.0 1.8 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF18941 - 0.0013 17.5 0.0 0.0023 16.8 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase DUF553 PF04473.12 NODE_3562_length_1905_cov_232.002139_g2487_i1reverse_frame_1 - 0.0037 16.8 1.3 0.045 13.3 0.1 2.4 2 0 0 2 2 2 2 Transglutaminase-like domain Peptidase_S10 PF00450.22 NODE_3562_length_1905_cov_232.002139_g2487_i1forward_frame_1 - 4.6e-82 276.7 0.6 7.9e-82 275.9 0.6 1.4 1 0 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 NODE_3562_length_1905_cov_232.002139_g2487_i1forward_frame_1 - 5.3e-06 26.7 12.9 5.3e-06 26.7 12.9 2.0 1 1 1 2 2 2 1 EGF-like domain EGF_Tenascin PF18720.1 NODE_3562_length_1905_cov_232.002139_g2487_i1forward_frame_1 - 0.0032 17.5 6.4 0.0064 16.5 6.4 1.5 1 0 0 1 1 1 1 Tenascin EGF domain EGF PF00008.27 NODE_3562_length_1905_cov_232.002139_g2487_i1forward_frame_1 - 0.012 16.0 8.7 0.033 14.5 8.7 1.8 1 0 0 1 1 1 0 EGF-like domain EB PF01683.18 NODE_3562_length_1905_cov_232.002139_g2487_i1forward_frame_1 - 0.44 10.9 11.7 1 9.7 11.7 1.6 1 0 0 1 1 1 0 EB module I-EGF_1 PF18372.1 NODE_3562_length_1905_cov_232.002139_g2487_i1forward_frame_1 - 3.2 7.9 11.3 1.6 8.9 8.7 1.9 2 0 0 2 2 2 0 Integrin beta epidermal growth factor like domain 1 DUF553 PF04473.12 NODE_3561_length_1905_cov_252.752941_g2487_i0reverse_frame_1 - 0.0037 16.8 1.3 0.045 13.3 0.1 2.4 2 0 0 2 2 2 2 Transglutaminase-like domain Peptidase_S10 PF00450.22 NODE_3561_length_1905_cov_252.752941_g2487_i0forward_frame_1 - 4.8e-82 276.6 0.6 7.9e-82 275.9 0.6 1.3 1 0 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 NODE_3561_length_1905_cov_252.752941_g2487_i0forward_frame_1 - 2.1e-06 28.0 12.9 5.3e-06 26.7 12.9 1.7 1 0 0 1 1 1 1 EGF-like domain EGF_Tenascin PF18720.1 NODE_3561_length_1905_cov_252.752941_g2487_i0forward_frame_1 - 0.0032 17.5 6.4 0.0064 16.5 6.4 1.5 1 0 0 1 1 1 1 Tenascin EGF domain EGF PF00008.27 NODE_3561_length_1905_cov_252.752941_g2487_i0forward_frame_1 - 0.014 15.6 8.7 0.033 14.5 8.7 1.7 1 0 0 1 1 1 0 EGF-like domain EB PF01683.18 NODE_3561_length_1905_cov_252.752941_g2487_i0forward_frame_1 - 0.34 11.2 10.9 0.8 10.0 10.9 1.6 1 0 0 1 1 1 0 EB module I-EGF_1 PF18372.1 NODE_3561_length_1905_cov_252.752941_g2487_i0forward_frame_1 - 0.65 10.1 8.7 1.6 8.9 8.7 1.6 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 Lipoxygenase PF00305.19 ORF75795 - 1.5e-08 33.6 0.0 9.4e-08 31.0 0.0 2.2 2 1 0 2 2 2 1 Lipoxygenase DUF2062 PF09835.9 ORF75795 - 8.1 6.3 11.1 16 5.3 11.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) ABC_tran PF00005.27 ORF13734 - 1.3e-06 29.0 0.0 2.8e-06 27.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF13734 - 0.041 13.5 5.7 0.078 12.6 5.7 1.4 1 1 0 1 1 1 0 ABC transporter transmembrane region U79_P34 PF03064.16 ORF13734 - 0.059 12.7 0.0 0.098 12.0 0.0 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 E7 PF00527.18 ORF13734 - 0.19 12.0 0.2 0.46 10.7 0.2 1.6 1 0 0 1 1 1 0 E7 protein, Early protein NACHT PF05729.12 NODE_3562_length_1905_cov_232.002139_g2487_i1forward_frame_2 - 0.061 13.2 0.1 0.21 11.5 0.0 2.0 1 1 0 1 1 1 0 NACHT domain NACHT PF05729.12 NODE_3561_length_1905_cov_252.752941_g2487_i0forward_frame_2 - 0.075 12.9 0.0 0.2 11.5 0.0 1.8 1 0 0 1 1 1 0 NACHT domain Alpha-amylase PF00128.24 ORF75467 - 1.5e-12 47.8 0.0 2.7e-12 46.9 0.0 1.3 1 0 0 1 1 1 1 Alpha amylase, catalytic domain B12-binding PF02310.19 ORF75467 - 0.088 12.8 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain HECT PF00632.25 ORF21720 - 3.8e-49 167.8 0.0 6.8e-49 167.0 0.0 1.3 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) ABC_tran_CTD PF16326.5 ORF21720 - 0.063 13.5 0.4 0.19 12.0 0.4 1.8 1 0 0 1 1 1 0 ABC transporter C-terminal domain Pkinase PF00069.25 ORF104819 - 1.9e-50 171.7 0.0 2.5e-50 171.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF104819 - 4.4e-24 85.2 0.0 6.5e-24 84.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase cNMP_binding PF00027.29 ORF104819 - 5.9e-21 74.3 0.0 1.3e-15 57.2 0.0 3.5 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain Kinase-like PF14531.6 ORF104819 - 0.047 13.0 0.0 0.12 11.6 0.0 1.6 2 0 0 2 2 2 0 Kinase-like HSP70 PF00012.20 ORF88804 - 9.1e-97 324.7 0.8 1.4e-96 324.0 0.8 1.3 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF88804 - 3.5e-07 29.3 0.0 5.1e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 MreB/Mbl protein FGGY_C PF02782.16 ORF88804 - 0.024 14.4 0.2 0.076 12.7 0.2 1.8 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain WW PF00397.26 ORF81649 - 0.011 15.8 3.4 0.017 15.2 0.4 2.5 2 0 0 2 2 2 0 WW domain DUF1640 PF07798.11 ORF81649 - 0.15 12.1 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) zf-B_box PF00643.24 ORF81649 - 0.27 11.4 18.9 0.1 12.7 7.4 2.6 2 0 0 2 2 2 0 B-box zinc finger CEBP_ZZ PF16366.5 ORF81649 - 3 8.2 18.7 0.081 13.2 7.2 2.5 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Ribosomal_L40e PF01020.17 ORF81649 - 8.7 6.3 19.5 0.16 11.9 0.9 3.6 4 0 0 4 4 4 0 Ribosomal L40e family Arm PF00514.23 ORF50492 - 6.8e-47 156.1 28.0 2e-06 27.7 0.1 13.4 13 1 0 13 13 13 10 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF50492 - 1.4e-08 35.0 37.7 0.0039 17.6 1.1 9.2 7 4 3 11 11 10 4 HEAT-like repeat HEAT_2 PF13646.6 ORF50492 - 2.6e-08 34.1 35.7 0.00098 19.5 3.9 7.1 3 2 3 7 7 7 4 HEAT repeats Cnd1 PF12717.7 ORF50492 - 1.2e-07 31.9 1.0 9.9e-05 22.4 0.0 4.1 4 2 0 4 4 4 1 non-SMC mitotic condensation complex subunit 1 Atx10homo_assoc PF09759.9 ORF50492 - 1.8e-07 31.1 0.0 0.018 15.1 0.0 5.0 4 2 1 5 5 5 1 Spinocerebellar ataxia type 10 protein domain HEAT PF02985.22 ORF50492 - 4.9e-07 29.4 13.3 0.025 14.8 0.0 8.2 8 0 0 8 8 8 2 HEAT repeat V-ATPase_H_N PF03224.14 ORF50492 - 4.3e-06 26.2 0.0 0.025 13.9 0.0 2.9 1 1 0 2 2 2 2 V-ATPase subunit H Adaptin_N PF01602.20 ORF50492 - 6.3e-06 25.0 0.1 0.49 8.9 0.0 3.8 2 1 1 3 3 3 2 Adaptin N terminal region Arm_2 PF04826.13 ORF50492 - 2.2e-05 24.1 0.2 0.039 13.4 0.0 3.7 1 1 2 3 3 3 1 Armadillo-like KAP PF05804.12 ORF50492 - 0.00074 17.8 0.0 0.039 12.1 0.0 2.2 1 1 1 2 2 2 1 Kinesin-associated protein (KAP) RTP1_C1 PF10363.9 ORF50492 - 0.048 13.9 0.5 0.29 11.3 0.1 2.6 3 1 0 3 3 3 0 Required for nuclear transport of RNA pol II C-terminus 1 IFRD PF05004.13 ORF50492 - 1.2 8.2 8.2 6.6 5.7 0.2 3.5 2 1 0 4 4 4 0 Interferon-related developmental regulator (IFRD) Dicistro_VP4 PF11492.8 ORF50492 - 3.4 7.7 6.1 0.88 9.6 0.5 3.0 2 0 0 2 2 2 0 Cricket paralysis virus, VP4 CENP-F_leu_zip PF10473.9 ORF40522 - 0.00023 21.2 11.0 0.00023 21.2 11.0 7.0 1 1 5 8 8 8 4 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Tropomyosin PF00261.20 ORF40522 - 0.00088 18.7 18.0 0.00088 18.7 18.0 5.8 1 1 3 5 5 5 3 Tropomyosin DUF2353 PF09789.9 ORF40522 - 0.0018 17.7 13.9 0.0018 17.7 13.9 4.4 1 1 3 4 4 4 2 Uncharacterized coiled-coil protein (DUF2353) Fez1 PF06818.15 ORF40522 - 0.0094 16.4 95.7 1 9.8 16.0 6.0 1 1 4 5 5 5 3 Fez1 ATG16 PF08614.11 ORF40522 - 0.0098 16.1 19.6 0.0098 16.1 19.6 6.4 1 1 5 6 6 6 3 Autophagy protein 16 (ATG16) Bcr-Abl_Oligo PF09036.10 ORF40522 - 3 7.9 17.3 9.8 6.3 0.6 5.4 4 1 0 4 4 4 0 Bcr-Abl oncoprotein oligomerisation domain Ntox44 PF15607.6 ORF97530 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 P53_C PF11619.8 ORF93789 - 0.13 12.3 0.7 0.97 9.5 0.0 2.7 2 0 0 2 2 2 0 Transcription factor P53 - C terminal domain PapD-like PF14874.6 ORF93789 - 0.15 12.2 0.0 0.39 10.9 0.0 1.7 1 0 0 1 1 1 0 Flagellar-associated PapD-like Ntox44 PF15607.6 ORF76052 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 Ntox44 PF15607.6 ORF61856 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 eIF2A PF08662.11 ORF27700 - 1.6e-57 194.5 0.2 1.7e-52 178.2 0.1 2.8 1 1 2 3 3 3 2 Eukaryotic translation initiation factor eIF2A WD40 PF00400.32 ORF27700 - 0.0013 19.5 0.1 15 6.7 0.0 4.7 4 0 0 4 4 4 1 WD domain, G-beta repeat Ntox44 PF15607.6 ORF26536 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 FAD_binding_2 PF00890.24 ORF25801 - 1.7e-121 406.2 2.4 2.2e-121 405.9 2.4 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 ORF25801 - 1.2e-42 144.9 0.4 1.7e-42 144.4 0.4 1.2 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 ORF25801 - 5.9e-05 22.4 0.1 0.00086 18.6 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF25801 - 7.5e-05 22.0 3.6 0.03 13.4 2.5 2.3 2 0 0 2 2 2 2 Glucose inhibited division protein A Thi4 PF01946.17 ORF25801 - 0.00063 19.0 0.3 0.055 12.7 0.1 2.5 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 ORF25801 - 0.0016 17.8 0.8 0.0092 15.3 0.2 2.2 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.24 ORF25801 - 0.0028 17.3 0.4 0.0079 15.8 0.4 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF25801 - 0.012 14.6 0.0 0.02 14.0 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein HI0933_like PF03486.14 ORF25801 - 0.096 11.4 0.5 0.37 9.5 0.3 1.9 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox_3 PF13738.6 ORF25801 - 0.58 9.4 2.9 3.8 6.7 0.9 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Ntox44 PF15607.6 ORF22332 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 Peptidase_M1 PF01433.20 ORF92641 - 1.9e-43 148.6 0.8 3.4e-43 147.7 0.8 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF92641 - 2.4e-24 86.5 1.1 4.1e-24 85.8 1.1 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF92641 - 3.8e-19 68.8 0.0 2.7e-18 66.1 0.0 2.5 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_MA_2 PF13485.6 ORF92641 - 0.062 13.0 0.6 0.31 10.7 0.6 1.9 1 1 0 1 1 1 0 Peptidase MA superfamily NatB_MDM20 PF09797.9 ORF92641 - 0.065 12.2 0.2 0.12 11.3 0.2 1.3 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit ARL2_Bind_BART PF11527.8 ORF89404 - 4.2e-30 104.2 0.9 4.2e-30 104.2 0.9 3.8 3 2 0 3 3 3 2 The ARF-like 2 binding protein BART Ion_trans PF00520.31 ORF72754 - 3.7e-11 42.7 34.7 6.5e-11 41.9 34.7 1.4 1 0 0 1 1 1 1 Ion transport protein Sec62 PF03839.16 ORF72754 - 4e-05 23.2 8.8 4e-05 23.2 8.8 3.1 3 0 0 3 3 3 1 Translocation protein Sec62 Flp1_like PF16982.5 ORF72754 - 0.86 9.0 6.1 0.33 10.4 2.3 2.3 2 0 0 2 2 2 0 Putative Flagellin, Flp1-like, domain PKD_channel PF08016.12 ORF72754 - 1 7.9 38.5 0.015 14.0 7.6 3.2 2 1 1 3 3 3 0 Polycystin cation channel CDC45 PF02724.14 ORF72754 - 1 7.5 28.4 1.8 6.8 28.4 1.2 1 0 0 1 1 1 0 CDC45-like protein DUF913 PF06025.12 ORF72754 - 3.5 6.5 10.1 7.3 5.5 10.1 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Peptidase_M1 PF01433.20 ORF65610 - 1.9e-43 148.6 0.8 3.4e-43 147.7 0.8 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF65610 - 2.4e-24 86.5 1.1 4.1e-24 85.8 1.1 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF65610 - 3.8e-19 68.8 0.0 2.7e-18 66.1 0.0 2.5 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_MA_2 PF13485.6 ORF65610 - 0.062 13.0 0.6 0.31 10.7 0.6 1.9 1 1 0 1 1 1 0 Peptidase MA superfamily NatB_MDM20 PF09797.9 ORF65610 - 0.065 12.2 0.2 0.12 11.3 0.2 1.3 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit EF-hand_1 PF00036.32 ORF63133 - 0.00033 20.0 0.0 0.001 18.5 0.0 1.8 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF63133 - 0.002 18.6 0.0 0.0073 16.7 0.0 2.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF63133 - 0.002 17.9 0.0 0.0073 16.2 0.0 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF63133 - 0.0033 16.8 0.0 0.014 14.9 0.0 2.1 1 0 0 1 1 1 1 EF hand FliJ PF02050.16 ORF63133 - 0.051 13.8 0.1 0.051 13.8 0.1 6.0 3 1 3 6 6 6 0 Flagellar FliJ protein Hyccin PF09790.9 ORF63133 - 0.087 11.9 0.5 0.16 11.0 0.5 1.3 1 0 0 1 1 1 0 Hyccin Inj_translocase PF16928.5 ORF63133 - 0.24 10.8 16.6 0.55 9.6 16.6 1.5 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome EF-hand_1 PF00036.32 ORF51156 - 0.00033 20.0 0.0 0.001 18.5 0.0 1.8 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF51156 - 0.002 18.6 0.0 0.0073 16.7 0.0 2.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF51156 - 0.002 17.9 0.0 0.0073 16.2 0.0 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF51156 - 0.0033 16.8 0.0 0.014 14.9 0.0 2.1 1 0 0 1 1 1 1 EF hand FliJ PF02050.16 ORF51156 - 0.051 13.8 0.1 0.051 13.8 0.1 6.0 3 1 3 6 6 6 0 Flagellar FliJ protein Hyccin PF09790.9 ORF51156 - 0.087 11.9 0.5 0.16 11.0 0.5 1.3 1 0 0 1 1 1 0 Hyccin Inj_translocase PF16928.5 ORF51156 - 0.24 10.8 16.6 0.55 9.6 16.6 1.5 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome Ion_trans PF00520.31 ORF37018 - 3.4e-11 42.9 34.7 6.5e-11 41.9 34.7 1.5 1 0 0 1 1 1 1 Ion transport protein Sec62 PF03839.16 ORF37018 - 4e-05 23.2 8.8 4e-05 23.2 8.8 3.2 3 0 0 3 3 3 1 Translocation protein Sec62 SLC12 PF03522.15 ORF37018 - 0.002 17.2 7.6 0.002 17.2 7.6 1.8 2 0 0 2 2 2 1 Solute carrier family 12 Spo0A_C PF08769.11 ORF37018 - 0.067 13.3 0.5 0.19 11.8 0.5 1.7 1 0 0 1 1 1 0 Sporulation initiation factor Spo0A C terminal CDC45 PF02724.14 ORF37018 - 0.99 7.6 28.4 1.8 6.8 28.4 1.3 1 0 0 1 1 1 0 CDC45-like protein PKD_channel PF08016.12 ORF37018 - 1 7.9 38.5 0.015 14.0 7.6 3.1 2 1 1 3 3 3 0 Polycystin cation channel DUF913 PF06025.12 ORF37018 - 2.9 6.8 10.1 7.3 5.5 10.1 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Vfa1 PF08432.10 ORF37018 - 7 6.9 39.6 0.11 12.8 29.5 2.2 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 SNF2_N PF00176.23 ORF20933 - 5.3e-28 97.7 0.0 9.1e-28 97.0 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 ORF20933 - 4.8e-17 62.3 0.0 9.3e-17 61.4 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF20933 - 0.0009 18.5 0.0 0.0016 17.7 0.0 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase ResIII PF04851.15 ORF20933 - 0.14 12.2 0.0 0.57 10.2 0.0 2.1 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Bax1-I PF01027.20 ORF19633 - 0.0073 16.1 4.1 0.042 13.7 0.0 2.8 3 0 0 3 3 3 1 Inhibitor of apoptosis-promoting Bax1 7TMR-DISM_7TM PF07695.11 ORF19633 - 0.018 15.0 4.6 0.083 12.8 0.3 2.4 2 0 0 2 2 2 0 7TM diverse intracellular signalling DMT_YdcZ PF04657.13 ORF19633 - 0.85 9.9 6.4 0.5 10.6 0.1 2.7 3 0 0 3 3 3 0 Putative inner membrane exporter, YdcZ EF-hand_6 PF13405.6 ORF107546 - 7e-17 59.9 8.3 6.6e-05 22.5 0.0 6.9 7 0 0 7 7 7 4 EF-hand domain EF-hand_7 PF13499.6 ORF107546 - 2.8e-16 59.7 7.1 2.6e-06 27.8 0.0 4.5 5 0 0 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF107546 - 1.6e-14 52.3 8.6 7e-05 22.1 0.0 6.8 7 0 0 7 7 7 3 EF hand EF-hand_5 PF13202.6 ORF107546 - 1.7e-06 27.2 1.5 2.4e-05 23.6 0.1 3.0 2 0 0 2 2 2 1 EF hand SPARC_Ca_bdg PF10591.9 ORF107546 - 3.7e-06 27.2 0.2 0.02 15.2 0.0 2.8 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF107546 - 3.8e-05 23.5 9.8 0.035 13.9 0.1 4.6 5 1 1 6 6 6 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF107546 - 0.009 15.9 9.6 8.4 6.4 0.1 5.7 3 2 4 7 7 7 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF107546 - 0.042 14.2 0.6 3.3 8.1 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain Lzipper-MIP1 PF14389.6 ORF107546 - 2.3 8.6 6.5 0.74 10.2 0.2 2.9 3 0 0 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 2-oxoacid_dh PF00198.23 ORF6666 - 2.1e-79 266.2 0.0 2.9e-79 265.8 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 ORF6666 - 6.3e-67 221.4 35.3 6.9e-23 80.3 5.6 3.4 3 0 0 3 3 3 3 Biotin-requiring enzyme E3_binding PF02817.17 ORF6666 - 7.7e-16 58.2 0.1 2.5e-15 56.5 0.1 2.0 1 0 0 1 1 1 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 ORF6666 - 3.3e-15 55.6 17.8 0.0025 17.6 0.0 6.6 6 0 0 6 6 6 5 Biotin-lipoyl like RnfC_N PF13375.6 ORF6666 - 3.1e-12 46.3 15.5 0.00038 20.4 0.8 4.7 3 2 1 4 4 4 3 RnfC Barrel sandwich hybrid domain GCV_H PF01597.19 ORF6666 - 3.9e-10 39.7 19.0 0.00073 19.4 1.3 3.5 3 0 0 3 3 3 3 Glycine cleavage H-protein HlyD_D23 PF16576.5 ORF6666 - 3.4e-06 26.4 11.0 0.21 10.8 0.1 5.3 3 3 3 6 6 6 3 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQRA PF05896.11 ORF6666 - 1e-05 25.1 13.9 0.17 11.3 0.7 3.9 1 1 2 3 3 3 3 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PYNP_C PF07831.13 ORF6666 - 5.4e-05 22.8 13.5 13 5.6 0.1 6.3 4 2 1 6 6 6 0 Pyrimidine nucleoside phosphorylase C-terminal domain PTS_EIIA_1 PF00358.20 ORF6666 - 0.0002 21.1 14.4 5.2 6.9 0.2 6.1 3 3 3 6 6 6 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HlyD_3 PF13437.6 ORF6666 - 0.00081 20.1 16.5 0.49 11.1 0.1 5.9 4 3 3 7 7 6 2 HlyD family secretion protein RNA_pol_inhib PF16857.5 ORF6666 - 0.009 15.8 0.4 29 4.5 0.0 3.7 3 0 0 3 3 3 0 RNA polymerase inhibitor Adeno_knob PF00541.17 ORF6666 - 0.01 15.6 0.0 36 4.0 0.0 3.2 3 0 0 3 3 3 0 Adenoviral fibre protein (knob domain) QRPTase_N PF02749.16 ORF6666 - 0.034 14.2 8.8 5.2 7.2 0.2 4.6 5 1 0 5 5 5 0 Quinolinate phosphoribosyl transferase, N-terminal domain DUF2118 PF09891.9 ORF6666 - 0.17 11.8 7.8 5.8 6.9 0.4 3.7 3 1 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2118) DUF3597 PF12200.8 ORF6666 - 0.45 11.0 17.4 5.4 7.6 1.6 3.7 3 0 0 3 3 3 0 Domain of unknown function (DUF3597) DEC-1_N PF04625.13 ORF6666 - 0.76 8.7 19.0 0.09 11.8 2.3 3.0 3 0 0 3 3 3 0 DEC-1 protein, N-terminal region Peptidase_M23 PF01551.22 ORF6666 - 4.6 7.5 14.2 1.1e+02 3.1 0.1 5.8 3 3 1 6 6 6 0 Peptidase family M23 Metallophos PF00149.28 ORF52187 - 1.8e-12 48.2 0.0 3.2e-12 47.4 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase EF-hand_7 PF13499.6 ORF52187 - 2.7e-09 37.3 0.2 1.2e-08 35.3 0.2 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF52187 - 6.4e-08 31.6 0.0 0.019 14.5 0.0 3.1 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF52187 - 1.4e-05 24.6 0.3 0.087 12.8 0.2 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF52187 - 0.00034 20.0 0.2 0.62 9.7 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF52187 - 0.0068 16.2 0.6 0.29 11.0 0.0 2.7 1 1 1 2 2 2 1 EF-hand domain pair Sigma54_CBD PF04963.13 ORF52187 - 0.19 11.5 0.0 0.36 10.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 factor, core binding domain EF-hand_7 PF13499.6 ORF35696 - 1e-17 64.3 22.6 8.4e-07 29.4 3.2 3.8 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF35696 - 9.7e-12 44.6 16.6 1.7e-05 24.6 0.7 4.2 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF35696 - 1.2e-09 37.0 19.5 0.002 17.6 0.5 5.8 6 0 0 6 6 6 3 EF hand EF-hand_6 PF13405.6 ORF35696 - 1.2e-05 24.8 21.7 0.16 12.0 0.2 6.8 5 1 2 7 7 7 4 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF35696 - 0.0033 17.7 9.5 0.087 13.1 1.6 3.4 3 0 0 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region TAF1_subA PF14929.6 ORF35696 - 0.0037 16.7 0.7 1.1 8.7 0.0 2.8 2 1 0 2 2 2 2 TAF RNA Polymerase I subunit A EF-hand_5 PF13202.6 ORF35696 - 0.018 14.5 0.1 0.018 14.5 0.1 3.6 3 0 0 3 3 3 0 EF hand DUF1456 PF07308.13 ORF35696 - 0.092 13.1 1.3 9.1 6.7 0.1 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF1456) Clr5 PF14420.6 ORF35696 - 0.13 12.5 2.0 31 4.9 0.0 3.6 3 0 0 3 3 3 0 Clr5 domain EF-hand_4 PF12763.7 ORF35696 - 0.21 11.6 6.8 5.2 7.1 0.2 3.1 3 0 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand Nse4-Nse3_bdg PF15412.6 ORF35696 - 0.34 11.0 2.6 14 5.9 0.0 2.7 2 0 0 2 2 2 0 Binding domain of Nse4/EID3 to Nse3-MAGE KIF1B PF12423.8 ORF24354 - 0.0099 16.3 0.1 0.0099 16.3 0.1 3.2 3 1 0 3 3 3 1 Kinesin protein 1B DNA_gyraseB PF00204.25 ORF19964 - 2.1e-39 134.8 0.0 3.9e-39 133.9 0.0 1.4 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 ORF19964 - 4.5e-25 87.6 1.6 9.6e-25 86.5 1.6 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 ORF19964 - 1.1e-16 61.3 0.1 2.1e-16 60.4 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 ORF19964 - 2.6e-11 43.7 0.0 4.7e-11 42.8 0.0 1.5 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 ORF19964 - 0.0011 18.8 0.1 0.0023 17.8 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPRIM_C PF16898.5 ORF19964 - 0.0041 17.4 0.1 0.0081 16.4 0.1 1.4 1 0 0 1 1 1 1 C-terminal associated domain of TOPRIM GIDA PF01134.22 ORF9775 - 3.5e-170 566.3 0.0 4.6e-170 565.9 0.0 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A GIDA_assoc PF13932.6 ORF9775 - 1.8e-79 266.8 0.3 2.6e-79 266.3 0.3 1.2 1 0 0 1 1 1 1 GidA associated domain FAD_oxidored PF12831.7 ORF9775 - 1.1e-07 31.7 3.4 2.1e-07 30.7 3.4 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF9775 - 2.3e-07 30.3 4.4 0.00027 20.1 0.7 2.3 2 0 0 2 2 2 2 FAD binding domain Pyr_redox_2 PF07992.14 ORF9775 - 4.2e-05 22.9 1.4 9.5e-05 21.8 1.4 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF9775 - 0.0002 20.2 3.8 0.0036 16.1 0.4 2.9 3 0 0 3 3 3 1 HI0933-like protein AlaDh_PNT_C PF01262.21 ORF9775 - 0.00034 20.0 2.1 0.00087 18.6 1.6 2.1 2 1 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 ORF9775 - 0.0012 18.5 2.1 0.78 9.3 0.0 2.5 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 ORF9775 - 0.0064 15.8 2.0 0.062 12.5 2.0 2.2 1 1 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 ORF9775 - 0.011 16.3 0.2 0.037 14.6 0.2 2.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MarR_2 PF12802.7 ORF9775 - 0.015 15.2 0.2 0.43 10.5 0.0 2.8 3 0 0 3 3 3 0 MarR family NAD_binding_9 PF13454.6 ORF9775 - 0.49 10.4 4.0 0.2 11.6 0.3 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding FAD_binding_3 PF01494.19 ORF9775 - 0.62 9.2 3.1 0.96 8.6 0.2 2.3 3 0 0 3 3 3 0 FAD binding domain KxDL PF10241.9 ORF52981 - 7.8e-05 22.9 2.0 7.8e-05 22.9 2.0 4.9 5 0 0 5 5 5 2 Uncharacterized conserved protein Osmo_CC PF08946.10 ORF52981 - 0.00046 20.4 15.7 0.1 12.9 1.9 4.7 4 0 0 4 4 4 2 Osmosensory transporter coiled coil TMF_DNA_bd PF12329.8 ORF52981 - 0.002 18.1 10.3 0.002 18.1 10.3 7.2 5 3 2 7 7 7 1 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 ORF52981 - 0.73 10.1 13.8 9.8 6.5 2.8 4.9 2 1 3 5 5 5 0 Bacterial protein of unknown function (DUF948) DASH_Dam1 PF08653.10 ORF52981 - 1.2 9.0 7.8 5.7 6.8 0.0 4.3 4 1 0 4 4 4 0 DASH complex subunit Dam1 MCPsignal PF00015.21 ORF52981 - 2.2 8.1 15.7 3 7.6 0.0 4.5 3 1 2 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF2209 PF09974.9 ORF52981 - 6.5 7.1 8.4 0.34 11.3 0.6 2.7 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2209) MerR-DNA-bind PF09278.11 ORF52981 - 8.8 7.0 12.5 21 5.7 0.1 5.1 6 0 0 6 6 6 0 MerR, DNA binding Peptidase_C2 PF00648.21 ORF40501 - 6e-65 219.2 0.0 8.5e-65 218.7 0.0 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease zf-CCHC PF00098.23 ORF40501 - 5.7e-09 35.6 0.8 1.6e-08 34.2 0.8 1.8 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_5 PF14787.6 ORF40501 - 0.051 13.3 0.4 0.14 11.9 0.4 1.7 1 0 0 1 1 1 0 GAG-polyprotein viral zinc-finger zf-CCHC_2 PF13696.6 ORF40501 - 0.39 10.6 1.7 1.2 9.1 1.7 1.8 1 0 0 1 1 1 0 Zinc knuckle NAGLU PF05089.12 ORF25529 - 0.11 11.5 0.2 0.35 9.8 0.0 1.8 2 0 0 2 2 2 0 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain COMM_domain PF07258.14 ORF79059 - 0.014 15.5 3.2 0.1 12.7 0.4 3.2 2 0 0 2 2 2 0 COMM domain RRM_2 PF04059.12 ORF56684 - 2.2e-16 59.9 0.0 1.5e-15 57.1 0.0 2.1 2 0 0 2 2 2 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF56684 - 2.1e-08 33.9 0.1 3.6e-06 26.7 0.0 2.5 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Smg4_UPF3 PF03467.15 ORF56684 - 0.055 13.5 0.0 0.15 12.0 0.0 1.8 1 1 0 1 1 1 0 Smg-4/UPF3 family Metallophos PF00149.28 ORF52243 - 3.7e-12 47.2 6.7 6.9e-12 46.3 6.7 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase UPF0561 PF10573.9 ORF67839 - 0.68 10.1 7.9 0.48 10.5 5.3 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0561 FAM104 PF15434.6 ORF67839 - 4.7 7.8 10.1 0.4 11.3 4.6 2.0 2 0 0 2 2 2 0 Family 104 UCH PF00443.29 ORF94663 - 9.2e-11 41.7 0.0 1.5e-10 41.0 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Metallophos PF00149.28 ORF87409 - 1.8e-13 51.5 1.1 3.7e-13 50.4 1.1 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase HSP90 PF00183.18 ORF83079 - 6.1e-235 781.0 30.3 7.7e-235 780.7 30.3 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF83079 - 0.097 12.6 1.0 0.37 10.7 0.1 2.2 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF83079 - 0.11 12.5 1.1 0.21 11.6 0.1 2.0 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF83079 - 0.77 9.7 2.8 29 4.7 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain Amidinotransf PF02274.17 ORF83079 - 7 5.6 9.1 0.53 9.3 0.1 2.2 2 0 0 2 2 2 0 Amidinotransferase Pkinase PF00069.25 ORF76722 - 9.9e-35 120.2 0.6 1.5e-34 119.6 0.6 1.2 1 0 0 1 1 1 1 Protein kinase domain Kelch_1 PF01344.25 ORF76722 - 3.8e-19 68.0 8.3 1e-09 37.8 0.6 3.9 4 0 0 4 4 4 3 Kelch motif Pkinase_Tyr PF07714.17 ORF76722 - 1.2e-18 67.4 0.1 1.8e-18 66.8 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kelch_6 PF13964.6 ORF76722 - 4e-17 61.8 4.3 9.2e-06 25.8 0.0 4.5 3 1 1 4 4 4 2 Kelch motif Kelch_4 PF13418.6 ORF76722 - 3.2e-11 43.1 0.6 3.1e-05 23.9 0.0 4.2 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF76722 - 7.1e-08 32.3 0.4 0.67 10.0 0.4 3.6 3 0 0 3 3 3 3 Kelch motif Kelch_2 PF07646.15 ORF76722 - 9.5e-08 31.7 4.2 0.00099 19.0 0.1 4.0 4 0 0 4 4 4 2 Kelch motif Kinase-like PF14531.6 ORF76722 - 4.2e-07 29.6 0.0 7.8e-06 25.4 0.0 2.2 1 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF76722 - 0.00024 20.5 0.0 0.00043 19.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF76722 - 0.0016 18.4 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kelch_3 PF13415.6 ORF76722 - 0.015 15.6 1.8 2.7 8.4 0.0 3.5 4 1 0 4 4 4 0 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF62599 - 7.1e-16 58.0 2.7 3.6e-08 33.3 0.0 4.1 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF62599 - 6.9e-14 51.7 7.5 0.00014 22.1 0.1 4.6 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF62599 - 1.6e-10 40.7 7.1 0.00016 21.6 0.0 3.8 4 0 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 ORF62599 - 0.029 14.7 2.6 2.1 8.8 0.1 3.6 3 0 0 3 3 3 0 Kelch motif FA_desaturase PF00487.24 ORF62599 - 5.7 6.7 11.5 0.35 10.7 3.3 2.5 3 0 0 3 3 3 0 Fatty acid desaturase AAA PF00004.29 ORF61065 - 7e-37 126.8 0.0 1.5e-36 125.7 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF61065 - 7.9e-14 51.2 0.0 5.3e-13 48.5 0.0 2.6 1 1 0 1 1 1 1 AAA+ lid domain Vps4_C PF09336.10 ORF61065 - 1.6e-07 31.2 0.0 4.2e-07 29.9 0.0 1.8 1 0 0 1 1 1 1 Vps4 C terminal oligomerisation domain AAA_14 PF13173.6 ORF61065 - 5.5e-06 26.5 0.0 0.099 12.7 0.0 3.3 3 0 0 3 3 3 2 AAA domain AAA_2 PF07724.14 ORF61065 - 0.00012 22.3 0.0 0.00022 21.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 ORF61065 - 0.00026 21.0 0.8 0.0027 17.7 0.1 2.7 3 1 0 3 3 3 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF61065 - 0.00056 19.7 0.0 0.0013 18.5 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 ORF61065 - 0.0021 17.5 0.1 0.0037 16.7 0.1 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF61065 - 0.0034 16.6 0.0 0.0065 15.7 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_24 PF13479.6 ORF61065 - 0.0036 17.1 0.5 0.012 15.3 0.0 2.1 3 0 0 3 3 3 1 AAA domain AAA_22 PF13401.6 ORF61065 - 0.0042 17.4 0.1 0.012 15.8 0.1 1.8 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF61065 - 0.0059 16.4 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_16 PF13191.6 ORF61065 - 0.0084 16.5 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 ORF61065 - 0.01 16.3 0.5 0.039 14.5 0.0 2.4 3 0 0 3 3 2 0 AAA domain AAA_28 PF13521.6 ORF61065 - 0.016 15.4 0.0 0.051 13.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 ORF61065 - 0.027 14.0 0.2 0.23 11.0 0.1 2.2 2 1 0 2 2 2 0 P-loop containing dynein motor region AAA_33 PF13671.6 ORF61065 - 0.038 14.1 0.0 0.083 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF61065 - 0.075 13.4 0.8 0.44 11.0 0.2 2.7 2 1 0 2 2 1 0 RNA helicase AAA_25 PF13481.6 ORF61065 - 0.1 12.2 0.6 0.3 10.6 0.4 1.9 1 1 1 2 2 2 0 AAA domain NACHT PF05729.12 ORF61065 - 0.15 12.0 0.8 0.61 10.0 0.3 2.3 2 1 0 2 2 2 0 NACHT domain AAA_29 PF13555.6 ORF61065 - 0.16 11.7 0.0 0.33 10.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Viral_helicase1 PF01443.18 ORF61065 - 0.21 11.3 0.0 7.4 6.2 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 ORF61065 - 0.21 11.3 0.0 0.54 10.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain Aconitase PF00330.20 ORF40143 - 6e-98 328.8 0.0 7.9e-98 328.4 0.0 1.2 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 ORF40143 - 1.1e-40 139.0 0.0 1.7e-40 138.3 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain Fer2_4 PF13510.6 ORF40143 - 0.14 12.3 0.0 0.35 10.9 0.0 1.7 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain HSP90 PF00183.18 ORF20836 - 6.1e-235 781.0 30.3 7.7e-235 780.7 30.3 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF20836 - 0.097 12.6 1.0 0.37 10.7 0.1 2.2 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF20836 - 0.11 12.5 1.1 0.21 11.6 0.1 2.0 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF20836 - 0.77 9.7 2.8 29 4.7 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain Amidinotransf PF02274.17 ORF20836 - 7 5.6 9.1 0.53 9.3 0.1 2.2 2 0 0 2 2 2 0 Amidinotransferase DUF1073 PF06381.11 ORF55009 - 0.12 11.1 0.0 0.48 9.1 0.0 1.9 2 1 1 3 3 3 0 Protein of unknown function (DUF1073) ABC_tran PF00005.27 ORF107145 - 1.8e-19 70.6 0.0 2.6e-19 70.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter Enolase_C PF00113.22 ORF84278 - 1.5e-148 493.8 0.0 2.1e-148 493.3 0.0 1.2 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 ORF84278 - 1.3e-54 183.8 0.0 3.4e-54 182.5 0.0 1.7 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 ORF84278 - 2.7e-09 36.9 0.0 4.7e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like His_Phos_1 PF00300.22 ORF84278 - 4.4e-06 26.5 0.0 4.2e-05 23.3 0.0 2.2 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) MAAL_C PF07476.11 ORF84278 - 0.0001 21.6 0.0 0.00018 20.8 0.0 1.4 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus DUF2631 PF10939.8 ORF84278 - 0.087 12.7 0.0 0.24 11.2 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) SurA_N_3 PF13624.6 ORF69999 - 3.1e-54 183.1 6.6 3.1e-54 183.1 6.6 3.5 3 1 1 4 4 4 1 SurA N-terminal domain SurA_N_2 PF13623.6 ORF69999 - 3.7e-36 124.2 2.1 3.7e-36 124.2 2.1 3.9 4 1 1 5 5 5 1 SurA N-terminal domain Rotamase_2 PF13145.6 ORF69999 - 1.8e-34 119.2 25.9 3.5e-24 86.0 0.3 5.3 4 1 1 5 5 5 3 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF69999 - 4.9e-14 52.9 2.2 3.8e-13 50.0 0.1 3.1 2 1 0 2 2 2 1 PPIC-type PPIASE domain Rotamase PF00639.21 ORF69999 - 1.1e-13 51.9 8.6 1.4e-13 51.6 0.1 4.0 4 0 0 4 4 4 1 PPIC-type PPIASE domain SurA_N PF09312.11 ORF69999 - 5.1e-06 26.6 2.2 5.1e-06 26.6 2.2 2.3 2 0 0 2 2 2 1 SurA N-terminal domain DUF4214 PF13946.6 ORF69999 - 0.0037 17.3 0.2 0.02 14.9 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4214) DUF3783 PF12646.7 ORF69999 - 0.058 13.4 0.2 1.1 9.3 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3783) NDUF_C2 PF06374.11 ORF69999 - 0.18 11.9 0.2 0.54 10.4 0.2 1.8 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) CtnDOT_TraJ PF07863.11 ORF69999 - 0.55 10.9 4.2 2.4 8.8 0.1 3.2 3 0 0 3 3 3 0 Homologues of TraJ from Bacteroides conjugative transposon Glyco_hydro_31 PF01055.26 ORF27990 - 4.2e-121 405.2 4.0 5.5e-121 404.8 4.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF27990 - 2.2e-16 59.9 0.1 7.5e-16 58.2 0.1 2.0 1 0 0 1 1 1 1 Galactose mutarotase-like COX7C PF02935.16 ORF27990 - 0.056 13.7 0.0 0.15 12.3 0.0 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc Peptidase_C1 PF00112.23 ORF90390 - 1.8e-93 312.6 18.9 5.6e-52 177.0 5.2 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF90390 - 1.5e-06 27.3 5.4 0.0011 17.8 0.7 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF89115 - 4.4e-91 304.8 22.3 1.7e-46 159.0 6.9 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF89115 - 0.006 15.4 4.9 0.25 10.1 0.4 2.3 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF81943 - 1.2e-93 313.3 22.0 5.3e-50 170.5 5.6 2.2 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF81943 - 0.12 11.2 8.0 1.5 7.5 1.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF73930 - 2.1e-93 312.4 18.9 5.6e-52 177.0 5.2 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF73930 - 1.5e-06 27.3 5.4 0.0011 17.8 0.7 2.2 2 0 0 2 2 2 2 Peptidase C1-like family NUC153 PF08159.12 ORF71276 - 3.2e-09 36.4 8.9 3.5e-07 29.9 0.1 3.3 3 0 0 3 3 3 2 NUC153 domain Acyl_transf_3 PF01757.22 ORF111786 - 4.4e-12 45.7 45.7 4.4e-12 45.7 45.7 1.6 2 0 0 2 2 2 1 Acyltransferase family CbtA PF09490.10 ORF111786 - 0.15 11.8 1.9 2.8 7.6 0.3 2.7 3 0 0 3 3 3 0 Probable cobalt transporter subunit (CbtA) Acyl_transf_3 PF01757.22 ORF108917 - 4.4e-12 45.7 45.7 4.4e-12 45.7 45.7 1.6 2 0 0 2 2 2 1 Acyltransferase family CbtA PF09490.10 ORF108917 - 0.15 11.8 1.9 2.8 7.6 0.3 2.7 3 0 0 3 3 3 0 Probable cobalt transporter subunit (CbtA) Peptidase_C1 PF00112.23 ORF105704 - 1e-92 310.1 20.6 5.6e-52 177.0 5.2 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF105704 - 2.4e-06 26.6 5.9 0.0011 17.8 0.7 2.2 2 0 0 2 2 2 2 Peptidase C1-like family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks7.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks7.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks7.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks7.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5090 PF17009.5 NODE_31012_length_702_cov_49.965517_g24546_i0forward_frame_3 - 0.23 11.4 1.5 0.35 10.8 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Hpre_diP_synt_I PF07456.11 NODE_31011_length_702_cov_51.242879_g24545_i0reverse_frame_3 - 0.049 13.6 0.8 0.098 12.7 0.8 1.4 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase component I Homeobox_KN PF05920.11 NODE_30989_length_702_cov_396.823088_g24526_i0forward_frame_2 - 3.9e-12 45.9 1.9 1e-11 44.5 1.9 1.7 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_30989_length_702_cov_396.823088_g24526_i0forward_frame_2 - 1.3e-08 34.6 0.8 2.7e-08 33.5 0.8 1.5 1 0 0 1 1 1 1 Homeodomain HTH_Tnp_4 PF13613.6 NODE_30989_length_702_cov_396.823088_g24526_i0forward_frame_2 - 0.083 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease Phage_CI_repr PF07022.13 NODE_30989_length_702_cov_396.823088_g24526_i0forward_frame_2 - 0.13 12.4 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Asp PF00026.23 NODE_30980_length_702_cov_1435.005997_g24517_i0reverse_frame_3 - 5.8e-12 45.7 0.0 7.6e-12 45.3 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease FKBP_C PF00254.28 ORF99226 - 1.5e-23 82.9 0.0 3.1e-23 81.9 0.0 1.5 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Chon_Sulph_att PF06566.11 ORF99226 - 0.019 14.9 0.1 0.024 14.5 0.1 1.2 1 0 0 1 1 1 0 Chondroitin sulphate attachment domain XPC-binding PF09280.11 ORF99226 - 0.099 12.4 0.2 0.23 11.2 0.2 1.6 1 0 0 1 1 1 0 XPC-binding domain Lustrin_cystein PF14625.6 ORF94538 - 0.00028 21.2 64.2 0.37 11.2 1.0 9.5 3 3 6 9 9 9 6 Lustrin, cysteine-rich repeated domain Ephrin_rec_like PF07699.13 ORF94538 - 0.0003 20.5 64.3 0.0057 16.4 3.0 7.3 3 2 4 7 7 7 5 Putative ephrin-receptor like TNFR_c6 PF00020.18 ORF94538 - 0.056 13.8 4.7 0.056 13.8 4.7 7.4 4 3 1 5 5 5 0 TNFR/NGFR cysteine-rich region Dickkopf_N PF04706.12 ORF94538 - 0.1 13.1 44.8 2.1 8.9 2.0 7.3 3 2 2 5 5 5 0 Dickkopf N-terminal cysteine-rich region Opy2 PF09463.10 ORF94538 - 1.4 9.3 61.4 0.39 11.1 0.7 8.7 5 1 4 9 9 9 0 Opy2 protein MORN PF02493.20 ORF93935 - 9.3e-15 53.6 17.9 1.9e-05 24.2 1.8 4.4 4 0 0 4 4 4 4 MORN repeat DUF5408 PF17402.2 ORF93116 - 0.033 14.1 0.0 0.064 13.1 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5408) M20_dimer PF07687.14 ORF91923 - 8.9e-11 41.7 0.0 1.3e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 ORF91923 - 0.00025 20.8 0.0 0.00028 20.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 XPG_I PF00867.18 ORF89318 - 4.4e-24 84.6 0.4 9e-24 83.7 0.0 1.7 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 ORF89318 - 6.6e-24 84.3 0.0 1e-23 83.7 0.0 1.3 1 0 0 1 1 1 1 XPG N-terminal domain EMC3_TMCO1 PF01956.16 ORF89318 - 0.062 13.0 0.8 0.096 12.4 0.8 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Pput2613-deam PF14427.6 ORF89318 - 0.067 13.1 0.2 20 5.1 0.0 3.0 4 0 0 4 4 4 0 Pput_2613-like deaminase 5_3_exonuc_N PF02739.16 ORF89318 - 0.1 12.5 0.0 0.22 11.4 0.0 1.7 1 1 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain Patched PF02460.18 ORF88693 - 4.5e-09 35.0 25.3 5.4e-09 34.7 25.3 1.0 1 0 0 1 1 1 1 Patched family MMPL PF03176.15 ORF88693 - 0.0095 14.9 18.0 0.012 14.5 18.0 1.1 1 0 0 1 1 1 1 MMPL family SecD_SecF PF02355.16 ORF88693 - 0.097 12.0 22.9 0.15 11.4 22.9 1.2 1 0 0 1 1 1 0 Protein export membrane protein DUF3021 PF11457.8 ORF88693 - 2 8.8 24.5 3.2 8.1 10.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3021) DUF4659 PF15558.6 ORF86714 - 0.2 10.5 7.8 0.27 10.1 7.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4659) Lustrin_cystein PF14625.6 ORF86364 - 0.00028 21.2 64.2 0.37 11.2 1.0 9.5 3 3 6 9 9 9 6 Lustrin, cysteine-rich repeated domain Ephrin_rec_like PF07699.13 ORF86364 - 0.0003 20.5 64.3 0.0057 16.4 3.0 7.3 3 2 4 7 7 7 5 Putative ephrin-receptor like TNFR_c6 PF00020.18 ORF86364 - 0.056 13.8 4.7 0.056 13.8 4.7 7.4 4 3 1 5 5 5 0 TNFR/NGFR cysteine-rich region Dickkopf_N PF04706.12 ORF86364 - 0.1 13.1 44.8 2.1 8.9 2.0 7.3 3 2 2 5 5 5 0 Dickkopf N-terminal cysteine-rich region Opy2 PF09463.10 ORF86364 - 1.4 9.3 61.4 0.39 11.1 0.7 8.7 5 1 4 9 9 9 0 Opy2 protein FTO_CTD PF12934.7 ORF86149 - 0.002 17.9 0.1 0.0031 17.3 0.1 1.3 1 0 0 1 1 1 1 FTO C-terminal domain MCM3AP_GANP PF16769.5 ORF86149 - 0.022 13.0 0.4 0.03 12.6 0.4 1.1 1 0 0 1 1 1 0 MCM3AP domain of GANP DUF2399 PF09664.10 ORF84314 - 7.1e-07 29.3 0.0 1.1e-06 28.6 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function C-terminus (DUF2399) DUF2220 PF09983.9 ORF84314 - 4.1e-05 23.0 0.0 5.5e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria C-term(DUF2220) Ank_2 PF12796.7 ORF81161 - 7.2e-17 61.8 0.0 1.9e-07 31.6 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF81161 - 3e-16 59.5 0.0 1.1e-06 29.0 0.0 3.1 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF81161 - 3.3e-16 59.1 0.1 3.2e-06 27.3 0.0 3.3 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF81161 - 1.9e-12 47.0 0.0 0.0043 17.5 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF81161 - 2.4e-12 45.9 0.0 0.0029 18.0 0.0 3.8 3 0 0 3 3 3 3 Ankyrin repeat Hydrolase_like PF13242.6 ORF81161 - 1.2e-05 25.3 0.0 2.8e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 HAD-hyrolase-like Ras PF00071.22 ORF7836 - 8.1e-38 129.6 0.0 1.1e-37 129.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF7836 - 6.7e-26 90.9 0.0 1.1e-25 90.1 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF7836 - 3e-08 33.3 0.0 4e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF7836 - 0.00048 19.6 0.0 0.00055 19.3 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region TniB PF05621.11 ORF7836 - 0.14 11.5 0.0 0.23 10.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein Ribosomal_S3_C PF00189.20 ORF74840 - 1.1e-41 141.2 0.9 2.2e-41 140.3 0.9 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 ORF74840 - 5e-19 67.9 3.6 1.2e-18 66.7 3.6 1.6 1 0 0 1 1 1 1 KH domain KH_4 PF13083.6 ORF74840 - 0.00032 20.5 0.3 0.00082 19.2 0.2 1.7 1 1 0 1 1 1 1 KH domain MRP-S24 PF14955.6 ORF74840 - 0.15 12.0 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S24 PA PF02225.22 ORF74067 - 4e-08 33.2 0.0 6.1e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 PA domain XPG_I PF00867.18 ORF71159 - 4.4e-24 84.6 0.4 9e-24 83.7 0.0 1.7 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 ORF71159 - 6.6e-24 84.3 0.0 1e-23 83.7 0.0 1.3 1 0 0 1 1 1 1 XPG N-terminal domain EMC3_TMCO1 PF01956.16 ORF71159 - 0.062 13.0 0.8 0.096 12.4 0.8 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Pput2613-deam PF14427.6 ORF71159 - 0.067 13.1 0.2 20 5.1 0.0 3.0 4 0 0 4 4 4 0 Pput_2613-like deaminase 5_3_exonuc_N PF02739.16 ORF71159 - 0.1 12.5 0.0 0.22 11.4 0.0 1.7 1 1 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain MORN PF02493.20 ORF69404 - 1.3e-15 56.3 15.2 1.3e-06 27.9 0.4 4.8 4 0 0 4 4 4 3 MORN repeat IFT20 PF14931.6 ORF69404 - 0.0045 17.1 3.6 0.75 10.0 2.0 2.3 2 0 0 2 2 2 2 Intraflagellar transport complex B, subunit 20 HTH_Tnp_Mu_1 PF02316.16 ORF69404 - 0.035 14.3 0.6 0.057 13.6 0.6 1.4 1 0 0 1 1 1 0 Mu DNA-binding domain Fez1 PF06818.15 ORF63885 - 0.0029 18.1 26.7 0.0052 17.3 26.7 1.4 1 0 0 1 1 1 1 Fez1 EzrA PF06160.12 ORF63885 - 0.012 13.9 16.4 0.016 13.4 16.4 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA ALMT PF11744.8 ORF63885 - 0.11 11.3 15.9 0.16 10.8 15.9 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter Tmemb_cc2 PF10267.9 ORF63885 - 0.23 10.5 22.7 0.025 13.8 8.7 2.1 1 1 1 2 2 2 0 Predicted transmembrane and coiled-coil 2 protein Baculo_F PF12259.8 ORF63885 - 0.57 8.6 10.8 1.1 7.6 1.0 1.9 1 1 1 2 2 2 0 Baculovirus F protein NPV_P10 PF05531.12 ORF63885 - 0.66 10.5 7.8 0.79 10.2 0.7 2.6 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF3584 PF12128.8 ORF63885 - 4.3 4.7 29.1 5.6 4.4 29.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) HrpB7 PF09486.10 ORF63885 - 4.8 7.6 37.8 6 7.2 7.9 2.3 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) V_ATPase_I PF01496.19 ORF63885 - 4.8 5.0 12.7 5.7 4.7 12.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF948 PF06103.11 ORF63885 - 4.8 7.5 7.1 32 4.9 5.7 2.5 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) FAM184 PF15665.5 ORF63885 - 7.3 6.3 32.3 3.9 7.2 1.9 3.1 1 1 2 3 3 3 0 Family with sequence similarity 184, A and B Tup_N PF08581.10 ORF63885 - 9.3 6.6 14.9 1.4 9.3 5.2 3.0 1 1 1 2 2 2 0 Tup N-terminal DUF1664 PF07889.12 ORF63885 - 9.5 6.3 14.5 3.2 7.8 7.8 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) EF-hand_1 PF00036.32 ORF62277 - 7.2e-08 31.5 0.1 0.0026 17.2 0.0 2.6 2 0 0 2 2 2 2 EF hand Ion_trans PF00520.31 ORF62277 - 5e-06 25.9 3.1 7.1e-06 25.4 3.1 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF62277 - 6.4e-05 23.3 0.3 0.00014 22.3 0.3 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF62277 - 0.00013 21.6 0.1 0.18 11.9 0.0 2.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF62277 - 0.00044 19.6 0.3 0.47 10.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF62277 - 0.004 17.0 0.2 0.13 12.1 0.1 2.5 2 0 0 2 2 2 1 EF-hand domain pair Pkinase PF00069.25 ORF60151 - 1.1e-35 123.2 0.0 1.3e-35 123.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60151 - 4.1e-07 29.6 0.0 5e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF60151 - 5.2e-06 26.0 0.0 7.8e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF60151 - 0.0092 15.4 0.2 0.017 14.4 0.2 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF60151 - 0.084 12.8 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family ubiquitin PF00240.23 ORF53593 - 2.8e-22 78.2 1.1 1.2e-15 57.0 0.1 2.7 3 0 0 3 3 3 2 Ubiquitin family Rad60-SLD PF11976.8 ORF53593 - 4.3e-09 36.1 0.2 1.1e-06 28.4 0.1 2.4 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF53593 - 0.002 18.4 0.0 2 8.9 0.0 3.3 3 1 0 3 3 3 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF53593 - 0.0072 16.3 0.1 7.3 6.7 0.0 2.7 3 0 0 3 3 3 2 Ubiquitin-like domain PA PF02225.22 ORF50429 - 4e-08 33.2 0.0 6.1e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 PA domain Aminotran_3 PF00202.21 ORF49679 - 3.5e-47 161.0 0.0 4e-47 160.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III GTP_EFTU_D3 PF03143.17 ORF4952 - 9.1e-21 74.3 6.6 1.2e-20 73.9 0.2 2.7 3 0 0 3 3 3 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF4952 - 5.9e-09 36.2 0.1 1.5e-08 34.9 0.1 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GCP_C_terminal PF04130.13 ORF48685 - 1.6e-21 77.1 15.0 1.8e-21 76.9 15.0 1.0 1 0 0 1 1 1 1 Gamma tubulin complex component C-terminal Rhomboid PF01694.22 ORF47008 - 1.6e-19 70.4 6.1 1.6e-19 70.4 6.1 1.7 1 1 1 2 2 2 1 Rhomboid family DUF5516 PF17637.2 ORF47008 - 0.1 12.3 0.1 0.1 12.3 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5516) PKcGMP_CC PF16808.5 ORF4685 - 0.0021 17.9 4.2 0.0021 17.9 4.2 3.5 4 0 0 4 4 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase ICA69 PF04629.14 ORF4685 - 0.79 10.0 12.5 1 9.6 12.5 1.1 1 0 0 1 1 1 0 Islet cell autoantigen ICA69, C-terminal domain Fzo_mitofusin PF04799.13 ORF4685 - 0.8 9.2 6.6 1.2 8.7 5.6 1.8 1 1 0 1 1 1 0 fzo-like conserved region CC2-LZ PF16516.5 ORF4685 - 7 7.1 19.6 0.33 11.3 3.6 2.7 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator PA PF02225.22 ORF44882 - 4e-08 33.2 0.0 6.1e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 PA domain MORN PF02493.20 ORF4413 - 9.3e-15 53.6 17.9 1.9e-05 24.2 1.8 4.4 4 0 0 4 4 4 4 MORN repeat PA PF02225.22 ORF42231 - 4e-08 33.2 0.0 6.1e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 PA domain Lustrin_cystein PF14625.6 ORF39489 - 0.00028 21.2 64.2 0.37 11.2 1.0 9.5 3 3 6 9 9 9 6 Lustrin, cysteine-rich repeated domain Ephrin_rec_like PF07699.13 ORF39489 - 0.0003 20.5 64.3 0.0057 16.4 3.0 7.3 3 2 4 7 7 7 5 Putative ephrin-receptor like TNFR_c6 PF00020.18 ORF39489 - 0.056 13.8 4.7 0.056 13.8 4.7 7.4 4 3 1 5 5 5 0 TNFR/NGFR cysteine-rich region Dickkopf_N PF04706.12 ORF39489 - 0.1 13.1 44.8 2.1 8.9 2.0 7.3 3 2 2 5 5 5 0 Dickkopf N-terminal cysteine-rich region Opy2 PF09463.10 ORF39489 - 1.4 9.3 61.4 0.39 11.1 0.7 8.7 5 1 4 9 9 9 0 Opy2 protein WW PF00397.26 ORF37101 - 7.6e-11 41.9 7.0 7.6e-11 41.9 7.0 2.1 2 0 0 2 2 2 1 WW domain CSD PF00313.22 ORF37101 - 0.11 12.3 0.0 0.24 11.3 0.0 1.6 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain EF-hand_6 PF13405.6 ORF35225 - 5.3e-05 22.8 0.4 0.033 14.1 0.0 2.9 2 1 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF35225 - 0.00088 18.7 2.2 0.029 13.9 0.1 2.8 3 0 0 3 3 3 1 EF hand EF-hand_5 PF13202.6 ORF35225 - 0.0068 15.9 1.7 0.15 11.6 0.2 3.2 3 0 0 3 3 3 1 EF hand EF-hand_7 PF13499.6 ORF35225 - 0.021 15.3 0.3 0.062 13.7 0.3 1.8 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_8 PF13833.6 ORF35225 - 0.09 12.6 0.7 0.75 9.7 0.1 2.3 1 1 1 2 2 2 0 EF-hand domain pair Ank_2 PF12796.7 ORF34726 - 1.1e-14 54.7 0.0 2.4e-07 31.2 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF34726 - 2e-12 47.0 0.0 2.9e-05 24.3 0.0 4.2 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 ORF34726 - 3.1e-10 39.4 0.0 0.0023 18.2 0.0 4.6 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF34726 - 3.2e-09 37.2 0.0 0.00036 21.0 0.0 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF34726 - 4.2e-09 36.5 0.1 3.8e-06 27.1 0.0 2.6 2 1 0 2 2 2 2 Ankyrin repeats (many copies) Patched PF02460.18 ORF33597 - 4.5e-09 35.0 25.3 5.4e-09 34.7 25.3 1.0 1 0 0 1 1 1 1 Patched family MMPL PF03176.15 ORF33597 - 0.0095 14.9 18.0 0.012 14.5 18.0 1.1 1 0 0 1 1 1 1 MMPL family SecD_SecF PF02355.16 ORF33597 - 0.097 12.0 22.9 0.15 11.4 22.9 1.2 1 0 0 1 1 1 0 Protein export membrane protein DUF3021 PF11457.8 ORF33597 - 2 8.8 24.5 3.2 8.1 10.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3021) PPR PF01535.20 ORF32221 - 8.3e-07 28.8 0.0 0.0095 16.1 0.0 4.2 4 0 0 4 4 4 1 PPR repeat PPR_2 PF13041.6 ORF32221 - 5e-06 26.6 0.0 0.00038 20.6 0.0 3.6 3 1 1 4 4 4 1 PPR repeat family PPR_1 PF12854.7 ORF32221 - 0.038 13.7 0.1 0.18 11.5 0.1 2.2 1 1 0 1 1 1 0 PPR repeat DUF4347 PF14252.6 ORF32221 - 0.17 11.7 1.8 0.22 11.4 0.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4347) Ion_trans PF00520.31 ORF30164 - 1.3e-06 27.9 4.1 2.7e-06 26.8 3.5 1.7 2 0 0 2 2 2 1 Ion transport protein NAD_binding_1 PF00175.21 ORF29742 - 1.8e-23 83.2 0.0 3.4e-23 82.4 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF29742 - 1.3e-06 28.7 0.0 2.1e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF29742 - 0.1 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain FAD_binding_8 PF08022.12 ORF29742 - 0.11 12.6 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 FAD-binding domain SieB PF14163.6 ORF27082 - 0.034 13.6 0.1 0.073 12.6 0.1 1.5 1 0 0 1 1 1 0 Super-infection exclusion protein B RHH_7 PF16777.5 ORF27082 - 0.25 11.8 2.2 3.1 8.2 0.3 2.4 2 0 0 2 2 2 0 Transcriptional regulator, RHH-like, CopG Glyco_hydro_31 PF01055.26 ORF22173 - 9.7e-28 97.5 0.1 2.3e-27 96.3 0.1 1.5 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF22173 - 2.3e-18 66.2 0.0 5.8e-18 64.9 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) DUF2070 PF09843.9 ORF19686 - 6.3 5.0 14.4 8 4.6 14.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) p450 PF00067.22 ORF16400 - 9.6e-09 34.5 0.1 1.3e-08 34.1 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Nebulin PF00880.18 ORF1583 - 0.0071 16.2 1.0 0.015 15.2 1.0 1.5 1 0 0 1 1 1 1 Nebulin repeat ABC_tran PF00005.27 ORF15705 - 5.5e-14 52.9 1.1 1.7e-13 51.3 0.0 2.0 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF15705 - 1.9e-08 34.0 1.1 2.2e-08 33.8 0.3 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF15705 - 0.093 13.0 0.6 2 8.7 0.6 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PX PF00787.24 ORF15545 - 6e-16 58.4 0.0 1.3e-15 57.3 0.0 1.6 2 0 0 2 2 2 1 PX domain ArlS_N PF18719.1 ORF15545 - 0.22 11.8 0.1 0.41 10.8 0.1 1.4 1 0 0 1 1 1 0 ArlS sensor domain Glycos_transf_1 PF00534.20 ORF12899 - 2.4e-38 131.4 0.0 2.8e-38 131.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF12899 - 2.9e-16 60.1 0.0 3.7e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF12899 - 0.00095 19.5 0.1 0.002 18.5 0.1 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycogen_syn PF05693.13 ORF12899 - 0.12 10.9 0.0 3.7 6.0 0.0 2.0 2 0 0 2 2 2 0 Glycogen synthase zf-CCCH_6 PF18585.1 ORF12899 - 0.14 12.0 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 MORN PF02493.20 ORF11187 - 2.3e-15 55.5 14.8 1.3e-06 27.9 0.4 4.6 4 0 0 4 4 4 3 MORN repeat IFT20 PF14931.6 ORF11187 - 0.0046 17.1 3.6 0.75 10.0 2.0 2.3 2 0 0 2 2 2 2 Intraflagellar transport complex B, subunit 20 HTH_Tnp_Mu_1 PF02316.16 ORF11187 - 0.036 14.3 0.6 0.057 13.6 0.6 1.4 1 0 0 1 1 1 0 Mu DNA-binding domain ABC_tran PF00005.27 ORF110872 - 5.4e-14 52.9 1.0 1.7e-13 51.3 0.0 2.0 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF110872 - 1.5e-08 34.3 0.6 1.8e-08 34.1 0.1 1.4 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF110872 - 0.096 12.9 0.6 2 8.7 0.6 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Viral_alk_exo PF01771.17 ORF107232 - 0.0011 18.0 0.6 0.0018 17.2 0.3 1.4 2 0 0 2 2 2 1 Viral alkaline exonuclease Phage_holin_3_6 PF07332.11 ORF107232 - 1.5 8.9 4.5 5.7 7.0 2.1 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Receptor_2B4 PF11465.8 ORF105615 - 0.31 11.3 3.8 0.18 12.0 1.3 2.0 2 1 1 3 3 3 0 Natural killer cell receptor 2B4 RRM_1 PF00076.22 ORF104285 - 1.4e-16 60.0 0.0 2.1e-16 59.5 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) YecM PF06185.12 ORF104285 - 0.036 13.7 0.0 0.052 13.2 0.0 1.2 1 0 0 1 1 1 0 YecM protein p450 PF00067.22 ORF103085 - 7.2e-17 61.3 0.1 1.1e-16 60.6 0.1 1.4 1 1 0 1 1 1 1 Cytochrome P450 Proton_antipo_M PF00361.20 ORF102243 - 2.1e-27 96.1 7.0 2.1e-27 96.1 7.0 1.6 1 1 0 1 1 1 1 Proton-conducting membrane transporter MJ1316 PF04457.12 ORF101199 - 1.5e-11 44.8 1.0 8.1e-11 42.5 0.1 2.5 3 0 0 3 3 3 1 MJ1316 RNA cyclic group end recognition domain Hamartin PF04388.12 ORF101199 - 0.093 11.4 6.6 0.11 11.2 6.6 1.1 1 0 0 1 1 1 0 Hamartin protein Smg4_UPF3 PF03467.15 ORF101199 - 0.42 10.6 11.4 0.79 9.7 11.4 1.4 1 0 0 1 1 1 0 Smg-4/UPF3 family Presenilin PF01080.17 ORF101199 - 1.9 7.1 6.4 2.1 7.0 6.4 1.1 1 0 0 1 1 1 0 Presenilin DUF816 PF05674.12 NODE_31360_length_694_cov_3.121396_g24844_i0reverse_frame_1 - 0.059 13.3 1.2 0.085 12.8 1.2 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF816) SPDY PF03771.16 NODE_31327_length_695_cov_2.618182_g24817_i0forward_frame_1 - 1.6 8.7 0.0 1.6 8.7 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF317) NDUF_B12 PF08122.12 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_1 - 0.0009 19.2 1.0 84 3.3 0.0 5.4 6 0 0 6 6 6 2 NADH-ubiquinone oxidoreductase B12 subunit family Nit_Regul_Hom PF10126.9 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_1 - 0.013 15.5 0.0 46 4.1 0.0 3.2 3 0 0 3 3 3 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII UPF0258 PF06789.12 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_1 - 8.9e-07 29.2 0.1 0.88 9.7 0.0 3.2 3 0 0 3 3 3 3 Uncharacterised protein family (UPF0258) BslA PF17735.1 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_1 - 4.1e-06 26.8 3.9 3.4 7.7 0.0 4.8 1 1 4 5 5 5 3 Biofilm surface layer A DUF2367 PF10164.9 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_1 - 0.011 16.2 1.3 94 3.6 0.1 4.1 1 1 4 5 5 5 0 Uncharacterized conserved protein (DUF2367) Ank PF00023.30 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_1 - 3.7 8.1 8.9 32 5.2 0.5 4.0 3 2 0 3 3 3 0 Ankyrin repeat TAP42 PF04177.12 NODE_31272_length_696_cov_3.992436_g24770_i0reverse_frame_1 - 0.025 13.7 1.4 0.035 13.2 1.4 1.3 1 0 0 1 1 1 0 TAP42-like family Rubis-subs-bind PF09273.11 NODE_31262_length_696_cov_88.226929_g24760_i0reverse_frame_1 - 1.2e-08 35.7 0.0 1.8e-08 35.1 0.0 1.3 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding SAP PF02037.27 NODE_31221_length_697_cov_4.436556_g24726_i0forward_frame_3 - 2.5e-07 30.3 1.7 4.7e-07 29.4 1.7 1.5 1 0 0 1 1 1 1 SAP domain LON_substr_bdg PF02190.16 NODE_31221_length_697_cov_4.436556_g24726_i0forward_frame_3 - 0.016 15.1 0.9 0.019 14.8 0.9 1.1 1 0 0 1 1 1 0 ATP-dependent protease La (LON) substrate-binding domain JHD PF17811.1 NODE_31221_length_697_cov_4.436556_g24726_i0forward_frame_3 - 0.42 11.2 5.9 0.34 11.5 2.2 2.1 1 1 1 2 2 2 0 Jumonji helical domain Presenilin PF01080.17 NODE_31221_length_697_cov_4.436556_g24726_i0forward_frame_3 - 0.56 8.9 3.1 0.67 8.7 3.1 1.2 1 0 0 1 1 1 0 Presenilin DUF3306 PF11748.8 NODE_31221_length_697_cov_4.436556_g24726_i0forward_frame_3 - 1.6 9.6 12.1 0.23 12.3 5.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3306) DUF4407 PF14362.6 NODE_31221_length_697_cov_4.436556_g24726_i0forward_frame_3 - 8.6 5.6 12.7 12 5.2 12.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DAOA PF15199.6 NODE_31221_length_697_cov_4.436556_g24726_i0forward_frame_2 - 0.0093 16.4 0.4 0.018 15.4 0.4 1.4 1 0 0 1 1 1 1 D-amino acid oxidase activator SPOB_ab PF14682.6 NODE_31219_length_697_cov_75.311178_g24724_i0reverse_frame_3 - 0.03 14.4 0.5 0.24 11.5 0.1 2.3 1 1 1 2 2 2 0 Sporulation initiation phospho-transferase B, C-terminal NUDIX PF00293.28 NODE_31192_length_698_cov_2.273002_g24702_i0reverse_frame_3 - 2.8e-26 92.1 0.1 3.8e-26 91.7 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain Cadherin_2 PF08266.12 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.00042 20.1 0.8 0.00042 20.1 0.8 2.1 2 0 0 2 2 2 1 Cadherin-like PKcGMP_CC PF16808.5 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.0079 16.0 18.5 0.028 14.3 0.1 5.2 2 1 2 4 4 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase CREPT PF16566.5 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.0093 16.1 2.0 0.0093 16.1 2.0 2.7 1 1 2 3 3 3 1 Cell-cycle alteration and expression-elevated protein in tumour HMMR_N PF15905.5 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.11 12.0 29.6 0.28 10.6 1.8 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal CENP-F_leu_zip PF10473.9 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.16 11.9 32.2 0.81 9.7 10.2 3.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF641 PF04859.12 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.83 10.0 20.2 0.54 10.6 3.2 3.7 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) OmpH PF03938.14 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.91 9.9 30.1 0.61 10.4 16.7 3.6 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Spc7 PF08317.11 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 2.7 6.8 30.1 0.22 10.4 5.3 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein Hemagglutinin PF00509.18 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 7.9 4.8 8.3 4.6 5.5 6.6 1.4 1 1 0 1 1 1 0 Haemagglutinin Pox_A_type_inc PF04508.12 NODE_31174_length_698_cov_115.239819_g24684_i0reverse_frame_2 - 0.91 9.5 6.1 48 4.0 1.0 3.9 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat ZapB PF06005.12 NODE_31174_length_698_cov_115.239819_g24684_i0reverse_frame_2 - 1.4 9.4 38.5 0.33 11.4 11.1 4.3 2 2 0 2 2 2 0 Cell division protein ZapB DUF2316 PF10078.9 NODE_31174_length_698_cov_115.239819_g24684_i0reverse_frame_2 - 4.4 7.6 12.0 0.19 12.0 0.9 2.5 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2316) GIT_CC PF16559.5 NODE_31174_length_698_cov_115.239819_g24684_i0reverse_frame_2 - 6.1 6.8 26.3 1.9 8.4 0.4 4.4 3 1 1 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor LPP PF04728.13 NODE_31174_length_698_cov_115.239819_g24684_i0reverse_frame_2 - 7.6 7.0 13.5 4.3 7.8 3.1 4.1 3 1 0 3 3 3 0 Lipoprotein leucine-zipper bZIP_1 PF00170.21 NODE_31174_length_698_cov_115.239819_g24684_i0reverse_frame_2 - 9.6 6.4 37.3 0.068 13.3 2.9 5.0 2 1 3 5 5 5 0 bZIP transcription factor DUF728 PF05304.12 NODE_31155_length_698_cov_1039.461538_g12620_i7reverse_frame_3 - 0.067 13.0 0.2 0.14 12.0 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF728) IBN_N PF03810.19 NODE_31155_length_698_cov_1039.461538_g12620_i7forward_frame_2 - 0.0089 15.9 0.2 0.022 14.7 0.2 1.6 1 0 0 1 1 1 1 Importin-beta N-terminal domain Gemini_AL1 PF00799.20 NODE_31150_length_699_cov_2.262048_g24667_i0reverse_frame_2 - 0.65 10.4 4.8 18 5.8 1.8 2.3 2 0 0 2 2 2 0 Geminivirus Rep catalytic domain Atthog PF18800.1 NODE_31139_length_699_cov_98.468373_g24656_i0forward_frame_3 - 0.068 13.1 0.1 0.095 12.6 0.1 1.1 1 0 0 1 1 1 0 Attenuator of Hedgehog PT PF04886.12 NODE_31139_length_699_cov_98.468373_g24656_i0forward_frame_3 - 0.13 11.8 0.1 0.23 11.0 0.1 1.3 1 0 0 1 1 1 0 PT repeat DUF5100 PF17029.5 NODE_31127_length_699_cov_182.659639_g24646_i0forward_frame_2 - 0.083 12.7 0.1 2.7 7.9 0.1 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF5100) Peptidase_C1 PF00112.23 NODE_31107_length_699_cov_254492.060241_g24631_i0forward_frame_3 - 6.5e-32 111.4 1.2 8.3e-32 111.0 1.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 NODE_31107_length_699_cov_254492.060241_g24631_i0forward_frame_3 - 0.0013 18.6 0.0 0.0033 17.3 0.0 1.6 1 1 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C2 PF00648.21 NODE_31107_length_699_cov_254492.060241_g24631_i0forward_frame_3 - 0.12 11.4 0.1 0.15 11.0 0.1 1.1 1 0 0 1 1 1 0 Calpain family cysteine protease APG6_N PF17675.1 ORF99887 - 0.0044 17.5 16.9 0.056 14.0 7.3 2.1 1 1 1 2 2 2 2 Apg6 coiled-coil region GAS PF13851.6 ORF99887 - 0.0096 15.3 9.0 0.0096 15.3 9.0 1.8 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding UPF0242 PF06785.11 ORF99887 - 0.01 15.9 7.1 0.01 15.9 7.1 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus SOGA PF11365.8 ORF99887 - 0.014 16.5 8.8 0.034 15.3 4.6 2.4 2 0 0 2 2 2 0 Protein SOGA ZapB PF06005.12 ORF99887 - 0.06 13.8 15.1 0.2 12.1 2.5 2.4 1 1 1 2 2 2 0 Cell division protein ZapB DUF4763 PF15960.5 ORF99887 - 0.22 10.8 8.2 0.047 13.0 3.8 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4763) V_ATPase_I PF01496.19 ORF99887 - 0.88 7.4 3.6 1.1 7.1 3.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Spc7 PF08317.11 ORF99887 - 1 8.2 12.6 1.2 8.0 4.8 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein FUSC PF04632.12 ORF99887 - 1.1 7.7 2.5 1.4 7.4 2.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family YabA PF06156.13 ORF99887 - 1.4 9.6 9.8 0.31 11.7 3.9 2.1 1 1 1 2 2 2 0 Initiation control protein YabA CENP-H PF05837.12 ORF99887 - 1.6 9.2 10.5 0.39 11.1 6.8 1.8 1 1 0 1 1 1 0 Centromere protein H (CENP-H) TMF_TATA_bd PF12325.8 ORF99887 - 2.4 8.4 13.2 0.82 9.9 6.5 2.4 1 1 0 2 2 2 0 TATA element modulatory factor 1 TATA binding Occludin_ELL PF07303.13 ORF99887 - 3.5 8.4 8.0 0.82 10.4 3.8 1.8 1 1 0 2 2 2 0 Occludin homology domain Atg14 PF10186.9 ORF99887 - 4.9 6.1 7.5 8 5.4 7.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Phage_integrase PF00589.22 ORF99185 - 0.043 13.6 0.0 0.31 10.8 0.0 2.2 2 1 0 2 2 2 0 Phage integrase family CorC_HlyC PF03471.17 ORF98770 - 2.5e-23 81.9 0.1 5.7e-23 80.7 0.1 1.6 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 ORF98770 - 8e-07 29.4 0.5 0.001 19.5 0.1 2.8 3 0 0 3 3 3 2 CBS domain CS PF04969.16 ORF98613 - 1.1e-12 48.7 0.4 2.5e-12 47.6 0.4 1.6 1 0 0 1 1 1 1 CS domain EF1_GNE PF00736.19 ORF98613 - 0.024 14.8 0.0 0.49 10.6 0.0 2.3 2 0 0 2 2 2 0 EF-1 guanine nucleotide exchange domain BiPBP_C PF06832.12 ORF98613 - 0.11 12.5 0.0 13 5.9 0.0 2.5 2 1 0 2 2 2 0 Penicillin-Binding Protein C-terminus Family Bac_globin PF01152.21 ORF98095 - 0.023 14.8 0.0 0.041 14.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial-like globin ACOX PF01756.19 ORF97841 - 1.2e-31 109.7 2.2 1.9e-31 109.0 2.2 1.3 1 0 0 1 1 1 1 Acyl-CoA oxidase LRR_8 PF13855.6 ORF97841 - 0.0024 17.6 2.8 0.78 9.5 0.1 2.6 3 0 0 3 3 3 2 Leucine rich repeat Asp PF00026.23 ORF97713 - 4.5e-11 42.7 0.0 5.7e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease MIP PF00230.20 ORF96676 - 5.6e-09 36.0 1.2 7.1e-09 35.7 1.2 1.1 1 0 0 1 1 1 1 Major intrinsic protein Ank_2 PF12796.7 ORF94118 - 3.3e-41 139.8 0.3 1.5e-17 63.9 0.0 3.8 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF94118 - 1.7e-28 98.3 6.6 2.7e-07 30.7 0.1 6.0 2 1 4 6 6 6 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF94118 - 2.2e-23 81.6 3.2 0.0013 19.1 0.0 6.1 5 1 1 6 6 6 5 Ankyrin repeat Ank_4 PF13637.6 ORF94118 - 1.6e-21 76.3 0.2 9.5e-10 38.8 0.0 4.3 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF94118 - 6.4e-20 69.1 0.1 0.0025 18.2 0.0 6.2 6 0 0 6 6 6 5 Ankyrin repeat YlzJ PF14035.6 ORF94118 - 0.17 12.1 0.1 47 4.3 0.0 3.7 5 0 0 5 5 5 0 YlzJ-like protein Asp PF00026.23 ORF90153 - 4.5e-11 42.7 0.0 5.7e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease RBFA PF02033.18 ORF89908 - 2.1e-09 37.8 0.1 3.1e-09 37.2 0.1 1.2 1 0 0 1 1 1 1 Ribosome-binding factor A eIF3_N PF09440.10 ORF89070 - 0.12 12.8 2.2 0.32 11.4 0.3 2.2 1 1 1 2 2 2 0 eIF3 subunit 6 N terminal domain YrhK PF14145.6 ORF88091 - 2.5e-15 56.1 11.6 7.9e-10 38.5 1.7 2.5 2 1 0 2 2 2 2 YrhK-like protein Acyl-CoA_dh_M PF02770.19 ORF86485 - 3.7e-07 30.3 0.0 5.6e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Aldedh PF00171.22 ORF85239 - 2.8e-11 42.6 1.1 1.7e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF2476 PF10630.9 ORF85239 - 0.14 12.3 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2476) Acyl-CoA_dh_M PF02770.19 ORF83085 - 3.7e-07 30.3 0.0 5.6e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain tRNA_bind PF01588.20 ORF82315 - 5.2e-23 81.0 0.0 7.7e-23 80.4 0.0 1.3 1 0 0 1 1 1 1 Putative tRNA binding domain Nnf1 PF03980.14 ORF81704 - 0.23 11.8 0.4 1.3 9.4 0.1 2.0 2 0 0 2 2 2 0 Nnf1 Spike_NTD PF16451.5 ORF81289 - 0.065 12.6 0.1 0.086 12.2 0.1 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain VWA_2 PF13519.6 ORF81289 - 0.094 13.4 0.0 0.23 12.1 0.0 1.6 1 0 0 1 1 1 0 von Willebrand factor type A domain DUF2654 PF10849.8 ORF81289 - 0.89 9.8 5.3 0.25 11.6 0.8 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2654) MYO10_CC PF16735.5 ORF79773 - 0.051 13.7 0.1 0.19 11.8 0.1 2.0 1 0 0 1 1 1 0 Unconventional myosin-X coiled coil domain ASH PF15780.5 ORF79157 - 3.6e-05 23.9 0.0 1.2 9.4 0.0 3.1 2 1 1 3 3 3 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin PapD-like PF14874.6 ORF79157 - 0.00089 19.4 0.0 0.87 9.8 0.0 2.6 2 1 0 2 2 2 2 Flagellar-associated PapD-like DUF2415 PF10313.9 ORF79157 - 0.19 11.7 0.1 0.69 9.9 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein domain (DUF2415) GST_C_3 PF14497.6 ORF78992 - 0.001 19.2 0.0 0.0016 18.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain IQ PF00612.27 ORF77693 - 0.0018 17.9 0.9 0.0035 17.0 0.9 1.5 1 0 0 1 1 1 1 IQ calmodulin-binding motif Aa_trans PF01490.18 ORF75170 - 5.8e-16 58.2 6.5 6.7e-16 58.0 6.5 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF3778 PF12620.8 ORF75170 - 0.016 14.8 0.0 0.093 12.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3778) ABC_tran PF00005.27 ORF72728 - 1.6e-37 129.0 0.0 2.7e-37 128.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF72728 - 1.2e-09 38.4 2.2 1.1e-05 25.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF72728 - 1.1e-06 28.3 0.0 3.5e-06 26.6 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF72728 - 5.2e-05 22.9 0.0 0.00012 21.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF72728 - 0.00011 22.2 0.0 0.00027 20.9 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 ORF72728 - 0.00038 20.9 0.1 0.00085 19.7 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 ORF72728 - 0.001 19.1 0.1 0.0014 18.7 0.1 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF72728 - 0.0036 17.8 0.0 0.0052 17.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 ORF72728 - 0.0058 16.8 0.1 0.093 13.0 0.1 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit NACHT PF05729.12 ORF72728 - 0.0094 15.9 0.5 0.51 10.2 0.1 2.9 2 1 1 3 3 3 1 NACHT domain AAA_22 PF13401.6 ORF72728 - 0.013 15.8 0.1 0.043 14.1 0.1 2.0 1 1 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 ORF72728 - 0.04 14.0 0.1 0.1 12.6 0.1 1.9 1 1 0 1 1 1 0 Dynamin family IstB_IS21 PF01695.17 ORF72728 - 0.045 13.5 0.1 0.31 10.8 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.6 ORF72728 - 0.07 12.8 0.3 0.18 11.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 ORF72728 - 0.084 12.4 0.1 0.3 10.6 0.0 1.9 2 1 1 3 3 3 0 AAA domain AAA_28 PF13521.6 ORF72728 - 0.11 12.7 0.3 0.3 11.3 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 ORF72728 - 0.13 11.2 0.0 0.58 9.0 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain DUF87 PF01935.17 ORF72728 - 0.21 11.7 0.1 0.36 10.9 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Ras PF00071.22 ORF69131 - 7.2e-53 178.5 0.5 9.1e-53 178.2 0.5 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF69131 - 1.5e-30 105.9 0.1 2.3e-30 105.2 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF69131 - 3.9e-10 39.5 0.4 5.3e-10 39.0 0.4 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF69131 - 2.3e-05 24.5 0.1 5.4e-05 23.2 0.1 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF69131 - 0.00037 19.9 0.4 0.00051 19.5 0.3 1.5 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF69131 - 0.0032 17.4 0.1 0.066 13.1 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_7 PF12775.7 ORF69131 - 0.0052 16.3 0.5 0.012 15.2 0.0 1.7 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_22 PF13401.6 ORF69131 - 0.0061 16.8 0.0 0.013 15.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain DAP3 PF10236.9 ORF69131 - 0.032 13.4 0.0 0.068 12.3 0.0 1.5 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 cobW PF02492.19 ORF69131 - 0.07 12.7 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 ORF69131 - 0.095 12.6 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_29 PF13555.6 ORF69131 - 0.12 12.1 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 ORF69131 - 0.18 12.3 0.6 0.26 11.8 0.4 1.6 1 1 0 1 1 1 0 ABC transporter Aha1_N PF09229.11 ORF6796 - 1.3e-23 83.7 7.7 1.3e-23 83.7 7.7 2.0 1 1 1 2 2 2 1 Activator of Hsp90 ATPase, N-terminal Prominin PF05478.11 ORF6796 - 6.2 4.6 8.2 8.4 4.2 8.2 1.1 1 0 0 1 1 1 0 Prominin AAA_23 PF13476.6 ORF6796 - 9.9 6.6 19.6 14 6.1 19.6 1.3 1 0 0 1 1 1 0 AAA domain DNA_pol_A_exo1 PF01612.20 ORF67565 - 0.00091 19.0 0.0 0.002 17.9 0.0 1.6 1 0 0 1 1 1 1 3'-5' exonuclease PspA_IM30 PF04012.12 ORF64437 - 3.3e-57 193.6 28.9 3.7e-57 193.5 28.9 1.0 1 0 0 1 1 1 1 PspA/IM30 family SLED PF12140.8 ORF64437 - 0.038 14.5 0.8 0.072 13.6 0.6 1.6 1 1 0 1 1 1 0 SLED domain DELLA PF12041.8 ORF64437 - 0.045 13.6 5.3 0.54 10.2 0.2 2.9 1 1 2 3 3 3 0 Transcriptional regulator DELLA protein N terminal Inhibitor_I48 PF10467.9 ORF64437 - 0.098 12.5 0.1 0.36 10.7 0.1 1.8 2 0 0 2 2 2 0 Peptidase inhibitor clitocypin DUF4472 PF14739.6 ORF64437 - 0.59 10.9 18.3 0.53 11.0 1.9 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4472) GAGA_bind PF06217.12 ORF64437 - 1.6 9.0 6.1 1.9 8.7 6.1 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family VSG_B PF13206.6 ORF64437 - 2.5 7.3 13.1 0.78 8.9 9.9 1.6 1 1 1 2 2 2 0 Trypanosomal VSG domain ABC_tran_CTD PF16326.5 ORF64437 - 9.4 6.6 24.0 0.56 10.5 2.7 4.7 2 2 3 5 5 5 0 ABC transporter C-terminal domain SH3_4 PF06347.13 ORF64342 - 3.8e-13 49.0 0.8 7.4e-06 25.7 0.1 2.7 2 0 0 2 2 2 2 Bacterial SH3 domain SH3_3 PF08239.11 ORF64342 - 3.9e-13 49.5 0.1 1.4e-05 25.3 0.0 3.3 2 1 0 2 2 2 2 Bacterial SH3 domain Chor_lyase PF04345.13 ORF64342 - 0.14 11.8 0.0 8.3 6.0 0.0 2.1 2 0 0 2 2 2 0 Chorismate lyase MgtE_N PF03448.17 ORF62087 - 2.8e-09 37.5 0.0 0.00074 20.1 0.0 2.8 1 1 2 3 3 3 3 MgtE intracellular N domain FliG_N PF14842.6 ORF62087 - 0.1 13.2 0.0 31 5.2 0.0 3.8 2 2 2 4 4 4 0 FliG N-terminal domain DUF4325 PF14213.6 ORF62087 - 0.98 9.2 7.7 30 4.4 0.1 4.6 4 2 1 5 5 5 0 STAS-like domain of unknown function (DUF4325) TED PF08341.11 ORF62 - 0.0025 18.2 0.4 0.0056 17.0 0.4 1.7 1 0 0 1 1 1 1 Thioester domain RMP PF14996.6 ORF62 - 0.31 11.3 7.5 0.93 9.7 0.1 2.4 2 0 0 2 2 2 0 Retinal Maintenance Circo_capsid PF02443.15 ORF58016 - 0.00033 20.3 0.7 0.00048 19.8 0.7 1.2 1 0 0 1 1 1 1 Circovirus capsid protein Peptidase_S78_2 PF14550.6 ORF58016 - 0.086 12.9 0.5 0.19 11.8 0.5 1.5 1 0 0 1 1 1 0 Putative phage serine protease XkdF CS PF04969.16 ORF57718 - 1.7e-09 38.6 0.3 3.1e-09 37.7 0.3 1.5 1 0 0 1 1 1 1 CS domain Siah-Interact_N PF09032.11 ORF57718 - 8.7e-07 29.2 3.4 8.7e-07 29.2 3.4 1.9 2 0 0 2 2 2 1 Siah interacting protein, N terminal SGS PF05002.15 ORF57718 - 0.045 13.9 0.3 0.045 13.9 0.3 2.2 2 1 0 2 2 2 0 SGS domain IFN-gamma PF00714.17 ORF57718 - 3.5 7.5 7.5 2.1 8.2 1.8 2.8 2 1 1 3 3 3 0 Interferon gamma ERp29 PF07749.12 ORF57718 - 4.4 8.3 11.4 1.5 9.8 4.9 2.8 2 1 1 3 3 3 0 Endoplasmic reticulum protein ERp29, C-terminal domain Rho_Binding PF08912.11 ORF57718 - 6.2 7.7 11.7 8.1 7.3 2.2 3.1 2 1 1 3 3 3 0 Rho Binding Thymidylate_kin PF02223.17 ORF56635 - 0.00056 19.6 0.0 0.0079 15.9 0.0 2.2 1 1 0 1 1 1 1 Thymidylate kinase NACHT PF05729.12 ORF56635 - 0.00072 19.5 0.0 0.0029 17.5 0.0 2.0 1 1 0 1 1 1 1 NACHT domain AAA_22 PF13401.6 ORF56635 - 0.0024 18.2 0.0 0.0038 17.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF56635 - 0.0038 17.8 0.0 0.0085 16.6 0.0 1.6 2 0 0 2 2 2 1 ABC transporter DUF87 PF01935.17 ORF56635 - 0.014 15.5 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain RNA_helicase PF00910.22 ORF56635 - 0.018 15.5 0.0 0.029 14.8 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 ORF56635 - 0.02 15.5 0.0 0.035 14.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 ORF56635 - 0.021 15.0 0.0 0.032 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 ORF56635 - 0.026 14.4 0.0 0.058 13.3 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Ploopntkinase3 PF18751.1 ORF56635 - 0.027 14.4 0.0 0.041 13.8 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 MMR_HSR1 PF01926.23 ORF56635 - 0.027 14.6 0.0 0.051 13.7 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_28 PF13521.6 ORF56635 - 0.028 14.7 0.0 0.052 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 ORF56635 - 0.055 12.6 0.0 0.082 12.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain DUF463 PF04317.12 ORF56635 - 0.069 12.1 0.0 0.35 9.7 0.0 1.9 1 1 1 2 2 2 0 YcjX-like family, DUF463 AAA_29 PF13555.6 ORF56635 - 0.084 12.6 0.0 0.25 11.1 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRP54 PF00448.22 ORF56635 - 0.085 12.5 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Pox_A32 PF04665.12 ORF56635 - 0.098 12.1 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A32 protein ATPase_2 PF01637.18 ORF56635 - 0.11 12.4 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea FtsK_SpoIIIE PF01580.18 ORF56635 - 0.13 11.6 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family RsgA_GTPase PF03193.16 ORF56635 - 0.13 12.1 0.1 0.3 11.0 0.1 1.5 2 0 0 2 2 2 0 RsgA GTPase AAA_16 PF13191.6 ORF56635 - 0.15 12.5 0.2 0.31 11.4 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain SMC_N PF02463.19 ORF56635 - 0.16 11.4 0.0 0.37 10.2 0.0 1.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Arf PF00025.21 ORF56635 - 0.19 11.2 0.0 0.33 10.4 0.0 1.3 1 0 0 1 1 1 0 ADP-ribosylation factor family Oxysterol_BP PF01237.18 ORF5492 - 6.2e-17 61.5 0.0 1.3e-16 60.5 0.0 1.5 1 0 0 1 1 1 1 Oxysterol-binding protein DUF1664 PF07889.12 ORF5492 - 0.76 9.8 4.2 0.44 10.6 1.5 2.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Ank_2 PF12796.7 ORF53853 - 6.9e-37 125.9 1.3 9.9e-12 45.3 0.0 4.1 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF53853 - 7.1e-22 77.5 0.0 4.8e-09 36.6 0.0 4.9 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF53853 - 6.3e-20 71.0 0.2 1.8e-05 24.9 0.0 5.0 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF53853 - 2.4e-17 62.5 0.1 0.0017 18.8 0.0 6.5 6 1 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 ORF53853 - 1.7e-11 43.3 0.0 0.0049 17.3 0.0 5.7 6 1 0 6 6 6 2 Ankyrin repeat HicA_toxin PF07927.12 ORF53853 - 0.69 10.0 8.0 25 5.0 0.0 4.8 5 1 1 6 6 6 0 HicA toxin of bacterial toxin-antitoxin, IQ PF00612.27 ORF52558 - 0.0018 17.9 0.9 0.0035 17.0 0.9 1.5 1 0 0 1 1 1 1 IQ calmodulin-binding motif Ras PF00071.22 ORF52302 - 4.1e-52 176.0 0.1 5.2e-52 175.7 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF52302 - 1.4e-31 109.2 0.0 2.5e-31 108.4 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF52302 - 3e-12 46.4 0.1 4.5e-12 45.8 0.1 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF52302 - 2.9e-05 24.1 0.1 8.8e-05 22.6 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF52302 - 0.00019 21.1 0.1 0.00071 19.2 0.1 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF52302 - 0.00079 18.9 0.0 0.0012 18.2 0.0 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF52302 - 0.0025 17.8 0.0 1.8 8.4 0.0 2.5 1 1 2 3 3 3 2 RsgA GTPase SRPRB PF09439.10 ORF52302 - 0.0091 15.4 1.6 0.091 12.2 0.0 2.2 1 1 0 2 2 2 1 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 ORF52302 - 0.015 15.6 0.0 0.028 14.8 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Septin PF00735.18 ORF52302 - 0.017 14.4 0.6 0.048 12.9 0.1 1.9 2 1 0 2 2 2 0 Septin AAA_14 PF13173.6 ORF52302 - 0.059 13.4 0.1 0.11 12.5 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF52302 - 0.13 12.5 0.1 0.37 11.1 0.0 1.9 1 1 1 2 2 2 0 AAA domain GST_C_3 PF14497.6 ORF50854 - 0.001 19.2 0.0 0.0016 18.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain RsfS PF02410.15 ORF4971 - 8e-06 26.2 0.0 1.3e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation Baseplate PF16774.5 ORF4971 - 0.17 11.8 4.5 2.3 8.1 3.7 2.2 2 0 0 2 2 2 0 Baseplate protein EMC3_TMCO1 PF01956.16 ORF46681 - 7e-28 97.5 3.9 1.1e-27 96.9 3.9 1.3 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like Aldedh PF00171.22 ORF45684 - 2.8e-11 42.6 1.1 1.7e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF2476 PF10630.9 ORF45684 - 0.14 12.3 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2476) EamA PF00892.20 ORF4526 - 0.003 17.7 3.2 0.003 17.7 3.2 2.7 3 0 0 3 3 3 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 ORF4526 - 0.0049 16.0 2.1 0.0049 16.0 2.1 1.5 2 0 0 2 2 2 1 Magnesium transporter NIPA FtsX PF02687.21 ORF4526 - 2.8 8.4 11.7 0.36 11.3 2.9 2.5 2 1 0 2 2 2 0 FtsX-like permease family PNP_UDP_1 PF01048.20 ORF41072 - 2.6e-49 167.6 1.9 2.9e-49 167.4 1.9 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Aldedh PF00171.22 ORF34462 - 2.8e-11 42.6 1.1 1.7e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF2476 PF10630.9 ORF34462 - 0.14 12.3 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2476) GST_N PF02798.20 ORF3368 - 1.1e-14 54.5 0.1 2.5e-14 53.4 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF3368 - 1.6e-11 44.3 0.1 3.3e-11 43.3 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF3368 - 2.7e-11 43.7 0.0 6.5e-11 42.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF3368 - 1.3e-07 31.8 0.0 2.8e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF3368 - 5.8e-07 29.6 0.2 1.2e-06 28.6 0.2 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF3368 - 0.0006 19.8 0.0 0.0012 18.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF3368 - 0.0035 18.0 0.0 0.013 16.2 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase N-terminal domain GST_C_6 PF17171.4 ORF3368 - 0.013 15.3 0.0 0.034 13.9 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Ion_trans PF00520.31 ORF33223 - 2.5e-12 46.6 13.5 3.2e-12 46.2 13.5 1.1 1 0 0 1 1 1 1 Ion transport protein DUF3886 PF13025.6 ORF33223 - 0.0014 18.7 1.7 0.0021 18.2 1.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3886) HemY_N PF07219.13 ORF33223 - 0.15 12.3 3.5 0.25 11.5 0.0 2.5 3 0 0 3 3 3 0 HemY protein N-terminus ECH_2 PF16113.5 ORF30003 - 5.2e-67 226.7 0.0 5.8e-67 226.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 ORF30003 - 1.7e-08 34.1 0.0 4.5e-08 32.7 0.0 1.6 1 1 1 2 2 2 1 Enoyl-CoA hydratase/isomerase FmrO PF07091.11 ORF30003 - 0.035 13.7 0.2 0.044 13.3 0.1 1.3 1 1 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) XhlA PF10779.9 ORF29562 - 0.18 12.0 2.2 0.27 11.5 1.0 2.0 2 1 0 2 2 2 0 Haemolysin XhlA Syntaxin-18_N PF10496.9 ORF29562 - 0.24 11.7 7.4 0.12 12.7 2.4 2.4 2 1 0 2 2 2 0 SNARE-complex protein Syntaxin-18 N-terminus eIF3_N PF09440.10 ORF29562 - 0.38 11.2 3.7 1.2 9.6 0.3 2.5 2 1 0 2 2 2 0 eIF3 subunit 6 N terminal domain LAGLIDADG_1 PF00961.19 ORF29562 - 0.64 11.0 6.5 0.83 10.7 0.4 3.0 1 1 1 3 3 3 0 LAGLIDADG endonuclease ABC_tran PF00005.27 ORF29517 - 2.1e-20 73.6 0.0 3.1e-20 73.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF29517 - 1.1e-11 45.1 0.8 1.6e-06 28.2 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF29517 - 6.2e-08 32.4 0.0 0.00011 21.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain NACHT PF05729.12 ORF29517 - 9.4e-05 22.4 0.0 0.00012 22.0 0.0 1.5 1 1 0 1 1 1 1 NACHT domain AAA_33 PF13671.6 ORF29517 - 0.0011 19.1 0.0 0.0014 18.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain DUF3584 PF12128.8 ORF29517 - 0.0023 15.6 0.0 0.0033 15.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) AAA_16 PF13191.6 ORF29517 - 0.0029 18.0 0.1 0.0051 17.2 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF29517 - 0.0031 17.3 0.0 0.0053 16.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 ORF29517 - 0.01 15.4 0.0 0.017 14.7 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF29517 - 0.02 15.2 0.1 0.072 13.4 0.1 1.9 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 ORF29517 - 0.028 13.6 0.0 0.049 12.8 0.0 1.4 2 0 0 2 2 2 0 NB-ARC domain AAA_14 PF13173.6 ORF29517 - 0.029 14.4 0.0 0.14 12.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 ORF29517 - 0.03 14.9 0.0 0.094 13.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 ORF29517 - 0.031 14.3 0.0 0.074 13.1 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_23 PF13476.6 ORF29517 - 0.034 14.6 0.0 0.054 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 ORF29517 - 0.038 13.7 0.0 0.061 13.0 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 ORF29517 - 0.044 13.5 0.0 0.23 11.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 ORF29517 - 0.048 13.6 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B FtsK_SpoIIIE PF01580.18 ORF29517 - 0.056 12.8 0.0 0.09 12.1 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_28 PF13521.6 ORF29517 - 0.057 13.6 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF29517 - 0.064 12.2 0.0 0.096 11.6 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 ORF29517 - 0.087 12.6 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Thymidylate_kin PF02223.17 ORF29517 - 0.089 12.5 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Thymidylate kinase AAA_17 PF13207.6 ORF29517 - 0.11 12.9 0.0 0.21 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF29517 - 0.12 12.5 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase Arf PF00025.21 ORF29517 - 0.15 11.5 0.1 0.28 10.6 0.1 1.4 1 0 0 1 1 1 0 ADP-ribosylation factor family BLUF PF04940.12 ORF28305 - 1.8e-05 24.7 0.2 4.9e-05 23.4 0.2 1.7 1 0 0 1 1 1 1 Sensors of blue-light using FAD Histone_HNS PF00816.21 ORF26252 - 1.4 9.8 6.4 1.7 9.5 3.2 2.2 2 0 0 2 2 2 0 H-NS histone family MAS20 PF02064.15 ORF26252 - 4.4 7.4 7.9 19 5.3 6.9 2.0 1 1 1 2 2 2 0 MAS20 protein import receptor Nop PF01798.18 ORF22275 - 4.6e-61 206.2 2.5 5.5e-61 206.0 2.5 1.1 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin APH PF01636.23 ORF20714 - 1.3e-27 97.3 3.6 1.9e-27 96.8 3.6 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family DUF1679 PF07914.11 ORF20714 - 0.022 13.7 0.0 0.025 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) Fructosamin_kin PF03881.14 ORF20714 - 0.023 13.9 0.0 0.042 13.0 0.0 1.4 2 0 0 2 2 2 0 Fructosamine kinase CS PF04969.16 ORF20152 - 7.5e-13 49.3 0.3 1.4e-12 48.4 0.3 1.5 1 0 0 1 1 1 1 CS domain Nudc_N PF14050.6 ORF20152 - 8.3e-12 44.9 0.2 1.4e-11 44.2 0.2 1.4 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. DUF3217 PF11506.8 ORF20152 - 0.039 13.9 0.4 0.072 13.1 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3217) BSMAP PF12280.8 ORF20152 - 0.084 13.1 3.7 0.13 12.4 3.8 1.3 1 1 0 1 1 1 0 Brain specific membrane anchored protein CSRNP_N PF16019.5 ORF20152 - 0.085 12.8 3.9 0.12 12.3 3.9 1.3 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus SOBP PF15279.6 ORF20152 - 0.094 13.3 0.9 0.11 13.1 0.9 1.1 1 0 0 1 1 1 0 Sine oculis-binding protein Presenilin PF01080.17 ORF20152 - 0.22 10.3 6.8 0.26 10.0 6.8 1.1 1 0 0 1 1 1 0 Presenilin Pinin_SDK_memA PF04696.13 ORF20152 - 0.45 10.6 14.6 0.82 9.7 14.6 1.3 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region Hid1 PF12722.7 ORF20152 - 0.51 8.4 7.2 0.57 8.2 7.2 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF1682 PF07946.14 ORF20152 - 1.2 8.3 11.1 1.6 7.9 11.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) NPR3 PF03666.13 ORF20152 - 1.2 7.9 6.9 1.5 7.6 6.9 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 XRN_M PF17846.1 ORF20152 - 1.5 7.7 10.3 2 7.3 10.3 1.1 1 0 0 1 1 1 0 Xrn1 helical domain GST_C_3 PF14497.6 ORF17478 - 0.001 19.2 0.0 0.0016 18.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain OKR_DC_1_C PF03711.15 ORF15875 - 7.9e-47 158.9 0.9 1.2e-46 158.3 0.9 1.3 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain OKR_DC_1 PF01276.20 ORF15875 - 1.2e-24 86.9 0.1 1.5e-24 86.5 0.1 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain ACC_epsilon PF13822.6 ORF12227 - 3.5 8.4 4.9 0.65 10.7 0.4 2.1 2 0 0 2 2 2 0 Acyl-CoA carboxylase epsilon subunit TPR_16 PF13432.6 ORF11728 - 7.1e-08 33.0 1.4 1.2e-07 32.2 1.4 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF11728 - 3.1e-06 27.4 1.1 5.6e-06 26.6 1.1 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF11728 - 5e-06 26.2 0.9 5e-06 26.2 0.9 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF11728 - 5.2e-06 26.9 2.3 0.00055 20.5 0.3 2.9 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF11728 - 1.5e-05 24.9 1.8 3.6e-05 23.6 0.4 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF11728 - 1.7e-05 24.4 1.0 1.7e-05 24.4 1.0 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF11728 - 0.00031 20.9 5.7 0.0033 17.7 0.1 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF11728 - 0.00053 20.1 1.1 0.0013 18.9 1.1 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_15 PF13429.6 ORF11728 - 0.00055 19.2 0.9 0.015 14.5 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF11728 - 0.00089 19.1 0.3 0.0023 17.8 0.3 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_20 PF14561.6 ORF11728 - 0.002 18.4 1.3 0.15 12.5 0.0 2.6 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF11728 - 0.024 15.2 0.2 0.56 11.0 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF11728 - 0.025 15.1 2.2 0.1 13.1 2.3 2.0 1 1 0 1 1 1 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF11728 - 0.087 13.1 1.5 0.18 12.0 1.5 1.6 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 BRK PF07533.16 ORF11728 - 0.13 11.9 2.0 7.9 6.2 0.5 2.4 2 0 0 2 2 2 0 BRK domain TPR_11 PF13414.6 ORF11728 - 0.13 12.0 9.4 0.75 9.5 0.2 3.5 3 1 1 4 4 4 0 TPR repeat RsdA_SigD_bd PF16751.5 ORF11728 - 0.15 12.4 1.3 0.29 11.4 0.2 2.1 2 0 0 2 2 2 0 Anti-sigma-D factor RsdA to sigma factor binding region Peripla_BP_6 PF13458.6 ORF109391 - 0.015 15.0 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein T2SSM_b PF10741.9 ORF109391 - 0.047 13.5 0.3 0.12 12.2 0.2 1.8 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein M subtype b PRT_C PF08372.10 ORF109391 - 0.11 12.3 0.3 0.34 10.6 0.0 1.8 2 0 0 2 2 2 0 Plant phosphoribosyltransferase C-terminal HC2 PF07382.11 ORF107120 - 4.7e-11 43.1 0.0 7.1e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 ASFV_J13L PF05568.11 ORF107120 - 2.1e-07 30.9 16.3 0.029 14.1 1.7 3.8 1 1 2 3 3 3 3 African swine fever virus J13L protein VCX_VCY PF15231.6 ORF107120 - 8.3 7.1 54.6 66 4.2 10.2 3.3 1 1 2 3 3 3 0 Variable charge X/Y family MORN PF02493.20 ORF106531 - 1.6e-53 175.5 71.8 4.5e-08 32.5 1.2 10.5 10 1 0 10 10 10 9 MORN repeat Tudor_2 PF18104.1 ORF106531 - 0.087 12.5 0.2 0.087 12.5 0.2 6.3 7 0 0 7 7 7 0 Jumonji domain-containing protein 2A Tudor domain Ribosomal_L6e PF01159.19 ORF102683 - 0.0038 17.8 0.6 0.0038 17.8 0.6 2.8 3 0 0 3 3 3 2 Ribosomal protein L6e RtcR PF06956.11 ORF102683 - 0.048 13.1 1.8 0.082 12.3 0.5 2.0 1 1 1 2 2 2 0 Regulator of RNA terminal phosphate cyclase Spc7 PF08317.11 ORF102164 - 0.11 11.3 33.7 0.02 13.8 24.3 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein NPV_P10 PF05531.12 ORF102164 - 0.35 11.4 7.3 1.4 9.4 3.3 3.4 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF773 PF05600.12 ORF102164 - 0.58 8.8 16.8 0.4 9.4 15.3 1.4 1 1 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 Fib_alpha PF08702.10 ORF102164 - 0.59 10.3 19.8 1.3 9.2 14.6 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Golgin_A5 PF09787.9 ORF102164 - 0.61 9.5 36.5 0.089 12.2 24.8 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 TMPIT PF07851.13 ORF102164 - 1.2 8.3 22.0 1.3 8.2 7.7 2.3 1 1 1 2 2 2 0 TMPIT-like protein Fez1 PF06818.15 ORF102164 - 1.3 9.4 34.2 10 6.5 34.2 2.1 1 1 0 1 1 1 0 Fez1 AIP3 PF03915.13 ORF102164 - 1.6 7.7 23.2 0.38 9.8 17.6 2.0 1 1 1 2 2 2 0 Actin interacting protein 3 ERM PF00769.19 ORF102164 - 1.9 8.2 50.8 0.084 12.7 39.0 2.2 1 1 1 2 2 2 0 Ezrin/radixin/moesin family DUF948 PF06103.11 ORF102164 - 2.4 8.5 3.8 14 6.0 0.1 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF5082 PF16888.5 ORF102164 - 2.9 8.2 19.0 0.61 10.4 0.8 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF5082) DUF1664 PF07889.12 ORF102164 - 3.1 7.9 13.7 2.1 8.4 4.9 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) ACR_tran PF00873.19 ORF102164 - 3.2 5.3 4.0 3.5 5.2 4.0 1.1 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family PIN_12 PF16289.5 ORF102164 - 4.2 7.8 7.6 3.5 8.1 6.5 1.3 1 1 0 1 1 1 0 PIN domain XLF PF09302.11 ORF102164 - 4.4 7.4 12.1 7.1 6.8 8.7 2.7 1 1 1 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Peptidase_S46 PF10459.9 ORF102164 - 5 5.6 17.3 5.8 5.4 17.3 1.1 1 0 0 1 1 1 0 Peptidase S46 TMF_TATA_bd PF12325.8 ORF102164 - 5.2 7.3 32.4 3.1 8.0 6.3 3.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Syntaxin-6_N PF09177.11 ORF102164 - 6.4 7.4 19.0 1.1 9.8 9.7 2.9 1 1 2 3 3 3 0 Syntaxin 6, N-terminal TPR_MLP1_2 PF07926.12 ORF102164 - 7.3 6.7 35.4 4.5 7.4 12.4 3.3 1 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein Caldesmon PF02029.15 ORF102164 - 9.5 4.8 26.2 14 4.3 26.2 1.2 1 0 0 1 1 1 0 Caldesmon BNIP2 PF12496.8 ORF102143 - 0.01 16.3 0.3 0.018 15.5 0.3 1.5 1 1 0 1 1 1 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 WHEP-TRS PF00458.20 ORF102143 - 0.077 13.2 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 WHEP-TRS domain 40S_SA_C PF16122.5 ORF101650 - 0.045 15.1 0.5 0.045 15.1 0.5 2.2 2 0 0 2 2 2 0 40S ribosomal protein SA C-terminus COMM_domain PF07258.14 NODE_31461_length_691_cov_503.852134_g24932_i0reverse_frame_1 - 3.4e-13 49.5 2.6 7e-13 48.5 2.6 1.5 1 0 0 1 1 1 1 COMM domain NPV_P10 PF05531.12 NODE_31461_length_691_cov_503.852134_g24932_i0reverse_frame_1 - 0.0059 17.0 1.8 0.013 16.0 1.8 1.5 1 0 0 1 1 1 1 Nucleopolyhedrovirus P10 protein CREPT PF16566.5 NODE_31461_length_691_cov_503.852134_g24932_i0reverse_frame_1 - 0.02 15.1 0.3 0.045 13.9 0.3 1.6 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour TSC22 PF01166.18 NODE_31445_length_692_cov_4.604262_g24919_i0reverse_frame_1 - 0.032 14.6 2.5 5.3 7.4 0.1 2.6 2 1 0 2 2 2 0 TSC-22/dip/bun family ZapB PF06005.12 NODE_31445_length_692_cov_4.604262_g24919_i0reverse_frame_1 - 0.93 10.0 8.1 5.3 7.6 0.9 2.4 2 0 0 2 2 2 0 Cell division protein ZapB Csm1_N PF18504.1 NODE_31445_length_692_cov_4.604262_g24919_i0reverse_frame_1 - 2.1 8.7 10.0 1.5 9.2 0.2 3.4 2 2 1 3 3 3 0 Csm1 N-terminal domain Ephrin_rec_like PF07699.13 NODE_31443_length_692_cov_52.675799_g24917_i0forward_frame_1 - 0.0036 17.0 4.1 0.25 11.1 0.2 2.6 2 0 0 2 2 2 2 Putative ephrin-receptor like ATP-sulfurylase PF01747.17 NODE_31435_length_692_cov_84.182648_g24909_i0forward_frame_1 - 0.14 11.6 0.1 0.25 10.8 0.1 1.4 1 0 0 1 1 1 0 ATP-sulfurylase Lipase_3 PF01764.25 NODE_31360_length_694_cov_3.121396_g24844_i0forward_frame_3 - 0.0082 16.0 0.1 0.018 14.9 0.0 1.6 2 0 0 2 2 2 1 Lipase (class 3) DUF1357 PF07094.11 NODE_31359_length_694_cov_7.590288_g24843_i0forward_frame_3 - 0.25 11.4 0.3 0.35 10.9 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1357) Molybdopterin PF00384.22 NODE_31327_length_695_cov_2.618182_g24817_i0forward_frame_2 - 1.1e-43 149.9 0.0 1.2e-43 149.7 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.16 NODE_31327_length_695_cov_2.618182_g24817_i0forward_frame_2 - 4.4e-08 33.0 0.1 7.9e-08 32.2 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Ras PF00071.22 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 1e-26 93.5 0.2 1.3e-26 93.1 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 2.7e-23 82.4 0.7 4.1e-23 81.9 0.1 1.5 2 0 0 2 2 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 2.3e-11 43.4 0.0 3.5e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 6.7e-06 26.2 0.0 1.1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.00011 21.7 0.0 0.00015 21.2 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region NTPase_1 PF03266.15 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.00025 21.0 0.0 0.00039 20.4 0.0 1.3 1 0 0 1 1 1 1 NTPase AAA PF00004.29 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.00041 20.8 0.1 0.00077 19.9 0.0 1.5 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.00049 20.4 0.2 0.0014 19.0 0.1 1.9 2 1 1 3 3 2 1 AAA domain ABC_tran PF00005.27 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.00059 20.4 0.0 0.00089 19.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SRPRB PF09439.10 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.00072 19.0 0.0 0.0011 18.5 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_14 PF13173.6 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0019 18.3 0.6 0.0031 17.5 0.0 1.8 2 1 0 2 2 1 1 AAA domain RsgA_GTPase PF03193.16 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0029 17.5 0.0 0.18 11.7 0.0 2.1 1 1 1 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.004 16.9 0.0 0.0063 16.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain Septin PF00735.18 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0041 16.4 0.0 0.0058 16.0 0.0 1.2 1 0 0 1 1 1 1 Septin PduV-EutP PF10662.9 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0044 16.8 0.1 0.0077 16.0 0.1 1.4 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation AAA_33 PF13671.6 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0055 16.9 0.0 0.0073 16.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0061 16.9 0.0 0.011 16.1 0.0 1.4 1 0 0 1 1 1 1 RNA helicase AAA_28 PF13521.6 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0063 16.8 0.0 0.0097 16.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Sigma54_activ_2 PF14532.6 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0076 16.4 0.0 0.037 14.1 0.0 1.9 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_18 PF13238.6 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0091 16.5 0.0 0.014 15.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain G-alpha PF00503.20 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.0097 15.1 0.2 0.012 14.8 0.0 1.4 2 0 0 2 2 2 1 G-protein alpha subunit TniB PF05621.11 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.015 14.7 0.0 0.025 14.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein NB-ARC PF00931.22 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.016 14.4 0.0 0.021 14.0 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain Sigma54_activat PF00158.26 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.021 14.6 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain ATP-synt_ab PF00006.25 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.024 14.3 0.0 0.028 14.1 0.0 1.2 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain TsaE PF02367.17 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.028 14.4 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.03 13.9 0.0 0.055 13.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region NACHT PF05729.12 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.045 13.7 0.0 0.071 13.0 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_16 PF13191.6 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.045 14.1 0.0 0.064 13.6 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.061 13.3 0.0 0.095 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Rad51 PF08423.11 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 0.097 11.9 0.1 0.14 11.4 0.1 1.2 1 0 0 1 1 1 0 Rad51 AAA_23 PF13476.6 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_3 - 4.8 7.6 10.8 2.2e+02 2.2 10.8 2.2 1 1 0 1 1 1 0 AAA domain SNAD1 PF18744.1 NODE_31308_length_695_cov_107.986364_g24800_i0forward_frame_2 - 0.033 14.1 1.3 0.86 9.4 0.2 2.3 2 1 0 2 2 2 0 Secreted Novel AID/APOBEC-like Deaminase 1 Pacifastin_I PF05375.13 NODE_31306_length_695_cov_114.286364_g24798_i0reverse_frame_2 - 4.9 7.0 6.6 14 5.5 0.3 2.9 3 0 0 3 3 3 0 Pacifastin inhibitor (LCMII) EF-hand_7 PF13499.6 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_3 - 1e-10 41.9 6.6 5.6e-10 39.5 1.0 2.3 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_3 - 2e-08 33.2 6.9 0.00033 20.0 0.1 3.6 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_3 - 1.6e-07 31.1 4.8 1.5e-06 27.9 1.3 2.8 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_3 - 3.8e-06 26.4 7.3 6.7e-05 22.5 0.2 3.6 3 0 0 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_3 - 0.0057 16.1 0.1 0.025 14.1 0.1 2.2 1 0 0 1 1 1 1 EF hand VF530 PF09905.9 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_3 - 0.1 12.8 0.2 0.35 11.1 0.1 1.8 2 0 0 2 2 2 0 DNA-binding protein VF530 DUF2267 PF10025.9 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_3 - 0.15 12.4 0.2 0.38 11.0 0.2 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) SPARC_Ca_bdg PF10591.9 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_3 - 0.98 9.8 7.5 3 8.2 7.5 2.1 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Fucose_iso_N2 PF07882.12 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_2 - 0.0065 16.1 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 L-fucose isomerase, second N-terminal domain EF-hand_6 PF13405.6 NODE_31304_length_695_cov_125.481818_g24796_i0reverse_frame_2 - 0.12 12.3 0.2 0.28 11.2 0.2 1.6 1 0 0 1 1 1 0 EF-hand domain RCC1_2 PF13540.6 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 3.8e-19 68.0 9.2 0.016 15.0 0.0 6.1 6 0 0 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 1.9e-07 31.3 1.1 9 6.3 0.0 5.5 5 1 1 6 6 6 2 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 4.2e-06 27.2 0.0 52 4.4 0.0 5.1 5 0 0 5 5 5 0 Spectrin repeat CAMSAP_CH PF11971.8 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 0.00026 20.7 0.3 24 4.9 0.0 4.9 5 0 0 5 5 5 0 CAMSAP CH domain DUF3232 PF11554.8 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 0.0085 16.5 0.1 97 3.4 0.0 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF3232) Crystall PF00030.19 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 0.015 15.5 0.8 13 6.1 0.0 3.1 1 1 1 3 3 3 0 Beta/Gamma crystallin Phage_holin_7_1 PF16081.5 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 0.021 15.0 18.4 17 5.6 0.2 5.0 1 1 4 5 5 5 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family DDE_Tnp_1_3 PF13612.6 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 0.023 14.7 3.2 1.2e+02 2.6 0.0 4.7 5 0 0 5 5 5 0 Transposase DDE domain DNA_pol3_tau_5 PF12170.8 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 0.027 14.5 2.0 71 3.4 0.0 4.2 5 0 0 5 5 5 0 DNA polymerase III tau subunit V interacting with alpha Sec66 PF09802.9 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 0.071 12.7 0.0 19 4.8 0.0 2.7 3 0 0 3 3 3 0 Preprotein translocase subunit Sec66 Bacteriocin_II PF01721.18 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 0.19 11.8 5.3 34 4.6 0.1 3.5 3 0 0 3 3 3 0 Class II bacteriocin Cys_rich_FGFR PF00839.17 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 1.3 9.2 9.7 46 4.3 0.1 4.1 4 0 0 4 4 4 0 Cysteine rich repeat Apo-CIII PF05778.12 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 2.1 8.0 11.7 85 2.9 0.1 4.8 5 0 0 5 5 5 0 Apolipoprotein CIII (Apo-CIII) DUF1786 PF08735.10 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 4.3 6.5 9.3 54 2.9 0.1 4.3 3 2 0 5 5 5 0 Putative pyruvate format-lyase activating enzyme (DUF1786) Glyco_hydro_88 PF07470.13 NODE_31289_length_695_cov_445.796970_g24783_i0reverse_frame_3 - 4.8 6.2 8.4 86 2.0 0.1 4.1 5 0 0 5 5 5 0 Glycosyl Hydrolase Family 88 EF-hand_12 PF17901.1 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_3 - 0.16 12.4 6.9 23 5.5 0.2 4.2 1 1 4 5 5 5 0 EF-hand fold domain DUF823 PF05689.11 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_3 - 1.4 8.7 18.8 5.5 6.7 0.6 3.3 1 1 2 3 3 3 0 Salmonella repeat of unknown function (DUF823) DUF3459 PF11941.8 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_3 - 3.4 8.0 15.7 16 5.9 0.3 4.8 1 1 2 3 3 3 0 Domain of unknown function (DUF3459) GWT1 PF06423.12 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_2 - 0.0028 17.8 10.2 9.5 6.3 1.0 4.3 1 1 3 4 4 4 4 GWT1 MyTH4 PF00784.17 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_2 - 2.7 8.5 16.8 25 5.4 0.2 4.7 2 1 3 5 5 5 0 MyTH4 domain TnpW PF14202.6 NODE_31289_length_695_cov_445.796970_g24783_i0forward_frame_2 - 8 6.4 5.1 1.2e+02 2.6 0.0 3.9 5 0 0 5 5 5 0 Transposon-encoded protein TnpW Spore_III_AF PF09581.10 NODE_31286_length_695_cov_662.345455_g24277_i1forward_frame_2 - 0.17 11.9 0.8 0.31 11.1 0.8 1.4 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) NolB PF17398.2 NODE_31265_length_696_cov_77.975794_g24763_i0reverse_frame_2 - 0.14 12.5 0.0 0.23 11.9 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein NolB Velvet PF11754.8 ORF99671 - 0.035 14.0 7.8 0.042 13.8 7.8 1.2 1 0 0 1 1 1 0 Velvet factor MMU163 PF17119.5 ORF99671 - 0.083 12.0 7.4 0.13 11.4 7.4 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis BUD22 PF09073.10 ORF99671 - 0.29 10.5 18.3 0.37 10.1 18.3 1.1 1 0 0 1 1 1 0 BUD22 TFIIA PF03153.13 ORF99671 - 0.46 10.4 22.9 0.57 10.1 22.9 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Zip PF02535.22 ORF99671 - 2.2 7.4 4.3 2.3 7.3 4.3 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter ThiD2 PF17792.1 ORF99671 - 4.6 7.7 7.3 6.1 7.3 2.1 2.7 2 1 1 3 3 3 0 ThiD2 family Band_3_cyto PF07565.13 ORF99671 - 6.2 6.6 11.9 3.1 7.5 9.8 1.6 2 0 0 2 2 2 0 Band 3 cytoplasmic domain Ion_trans PF00520.31 ORF99246 - 1.3e-06 27.8 4.9 2.6e-06 26.9 3.5 1.9 2 0 0 2 2 2 1 Ion transport protein G10 PF01125.17 ORF98865 - 6.2e-44 149.3 0.8 8.8e-44 148.8 0.8 1.2 1 0 0 1 1 1 1 G10 protein DnaJ_CXXCXGXG PF00684.19 ORF98585 - 1e-06 29.0 40.1 0.12 12.8 8.2 4.7 2 2 2 4 4 4 4 DnaJ central domain Paired_CXXCH_1 PF09699.10 ORF98585 - 0.0029 17.3 0.2 0.18 11.6 0.0 4.8 5 1 0 5 5 5 2 Doubled CXXCH motif (Paired_CXXCH_1) Dehyd-heme_bind PF09098.10 ORF98585 - 0.02 14.5 4.8 5 6.7 0.2 3.4 3 0 0 3 3 3 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding DUF3365 PF11845.8 ORF98585 - 0.088 13.1 6.1 16 5.8 0.0 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3365) DUF4760 PF15956.5 ORF98575 - 0.11 12.6 0.2 0.18 11.9 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4760) Arrestin_C PF02752.22 ORF97901 - 6.2e-06 26.7 0.0 8.8e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Arrestin (or S-antigen), C-terminal domain Ribul_P_3_epim PF00834.19 ORF97315 - 6.2e-61 205.3 0.0 7.6e-61 205.0 0.0 1.1 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family G6PD_C PF02781.16 ORF97315 - 0.15 11.2 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, C-terminal domain FH2 PF02181.23 ORF97128 - 2.1e-24 86.4 0.0 2.2e-24 86.3 0.0 1.0 1 0 0 1 1 1 1 Formin Homology 2 Domain Asp PF00026.23 ORF96806 - 1.5e-13 50.9 0.0 1.8e-13 50.6 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF96806 - 0.00092 19.0 0.0 0.0015 18.3 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Aldedh PF00171.22 ORF95580 - 4.1e-08 32.2 0.3 0.00078 18.1 0.0 2.0 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF1487 PF07368.11 ORF95580 - 0.0064 16.0 0.1 0.0094 15.4 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1487) Peptidase_M22 PF00814.25 ORF95535 - 4.1e-40 138.2 0.0 5.1e-40 137.9 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 ORF95535 - 0.0002 21.1 0.0 0.00026 20.8 0.0 1.1 1 0 0 1 1 1 1 Carbamoyltransferase N-terminus DDE_Tnp_Tn3 PF01526.17 ORF95535 - 0.009 14.8 0.0 0.012 14.4 0.0 1.1 1 0 0 1 1 1 1 Tn3 transposase DDE domain Velvet PF11754.8 ORF93114 - 0.035 14.0 7.8 0.042 13.8 7.8 1.2 1 0 0 1 1 1 0 Velvet factor MMU163 PF17119.5 ORF93114 - 0.083 12.0 7.4 0.13 11.4 7.4 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis BUD22 PF09073.10 ORF93114 - 0.29 10.5 18.3 0.37 10.1 18.3 1.1 1 0 0 1 1 1 0 BUD22 TFIIA PF03153.13 ORF93114 - 0.46 10.4 22.9 0.57 10.1 22.9 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Zip PF02535.22 ORF93114 - 2.2 7.4 4.3 2.3 7.3 4.3 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter ThiD2 PF17792.1 ORF93114 - 4.6 7.7 7.3 6.1 7.3 2.1 2.7 2 1 1 3 3 3 0 ThiD2 family Band_3_cyto PF07565.13 ORF93114 - 6.2 6.6 11.9 3.1 7.5 9.8 1.6 2 0 0 2 2 2 0 Band 3 cytoplasmic domain SHIPPO-rpt PF07004.12 ORF92304 - 3.3e-05 24.6 38.7 0.011 16.7 0.6 6.4 6 1 0 6 6 6 3 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF92304 - 1.8 7.9 4.8 1.7 8.0 0.2 2.5 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal Histone PF00125.24 ORF91820 - 0.7 10.3 0.0 0.7 10.3 0.0 3.0 2 1 1 3 3 3 0 Core histone H2A/H2B/H3/H4 Helicase_C PF00271.31 ORF89778 - 2e-30 105.4 0.1 5.3e-30 104.0 0.1 1.6 1 1 1 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF89778 - 0.00013 21.8 0.0 0.011 15.5 0.0 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 ORF89778 - 0.0068 15.7 0.0 0.0086 15.3 0.0 1.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase UTP25 PF06862.12 ORF89778 - 0.0085 14.9 0.0 0.02 13.7 0.0 1.5 1 1 0 1 1 1 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 COG5 PF10392.9 ORF89588 - 0.017 15.3 1.3 0.03 14.5 1.3 1.4 1 0 0 1 1 1 0 Golgi transport complex subunit 5 DnaB_2 PF07261.11 ORF8902 - 0.096 12.4 0.0 0.36 10.6 0.0 1.9 2 0 0 2 2 2 0 Replication initiation and membrane attachment FPP PF05911.11 ORF8902 - 0.5 8.5 11.2 0.033 12.4 6.6 1.3 2 0 0 2 2 2 0 Filament-like plant protein, long coiled-coil DivIC PF04977.15 ORF8902 - 3.5 7.4 9.9 7.3 6.4 1.6 3.0 3 0 0 3 3 3 0 Septum formation initiator Usher PF00577.20 ORF88056 - 2.3e-30 106.0 0.1 2.7e-30 105.8 0.1 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF88056 - 8.2e-20 70.4 0.3 2.2e-19 69.0 0.1 1.8 2 0 0 2 2 2 1 PapC C-terminal domain Fer4_6 PF12837.7 ORF85517 - 5.2e-13 48.5 32.2 4.8e-05 23.3 1.4 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.7 ORF85517 - 5.7e-13 49.2 25.5 2.2e-07 31.3 8.5 3.1 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF85517 - 1.4e-11 44.3 20.2 0.0004 20.4 0.4 3.6 3 1 1 4 4 4 4 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF85517 - 6e-11 42.3 21.2 5.3e-05 23.3 0.4 3.6 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.27 ORF85517 - 1.1e-10 40.8 35.0 3.2e-06 26.7 1.8 5.2 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_2 PF12797.7 ORF85517 - 1.1e-09 37.8 30.4 0.00083 19.3 1.4 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_21 PF14697.6 ORF85517 - 2.4e-08 34.0 21.9 1.3e-05 25.3 5.8 2.5 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF85517 - 1.2e-07 32.6 27.3 0.0056 17.6 1.1 3.8 2 1 1 3 3 3 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 ORF85517 - 6.1e-07 29.5 34.5 0.0045 17.4 4.5 4.6 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 ORF85517 - 8.5e-07 29.4 24.6 0.00026 21.5 0.3 3.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF85517 - 0.00011 22.8 41.1 0.016 16.1 5.6 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 ORF85517 - 0.0041 17.5 29.6 0.15 12.6 3.8 3.6 1 1 4 5 5 5 4 4Fe-4S dicluster domain UCR_Fe-S_N PF10399.9 ORF85517 - 0.04 13.3 0.8 0.09 12.1 0.8 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Fer4_22 PF17179.4 ORF85517 - 0.068 14.0 21.8 0.21 12.4 0.4 3.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 ORF85517 - 0.14 12.4 0.2 0.14 12.4 0.2 4.0 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_11 PF13247.6 ORF85517 - 0.18 12.0 11.7 0.12 12.5 2.2 2.7 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 ORF85517 - 0.67 9.7 20.5 14 5.5 1.1 3.2 2 1 1 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IQ PF00612.27 ORF81085 - 0.00014 21.4 2.8 0.0024 17.5 0.2 4.6 4 1 1 5 5 5 2 IQ calmodulin-binding motif Asp PF00026.23 ORF77021 - 1e-14 54.7 0.0 1.2e-14 54.4 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF77021 - 0.0009 19.1 0.0 0.0015 18.3 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Tho1_MOS11_C PF18592.1 ORF76565 - 0.0015 18.3 18.1 0.0039 17.0 4.6 4.5 2 1 4 6 6 6 4 Tho1/MOS11 C-terminal domain AIF-MLS PF14962.6 ORF76565 - 1.9 8.4 23.4 0.63 10.0 20.7 1.5 1 1 0 1 1 1 0 Mitochondria Localisation Sequence DUF1574 PF07611.11 ORF75770 - 0.073 12.4 2.4 0.078 12.3 1.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1574) TMEM237 PF15383.6 ORF75770 - 1.5 7.8 4.9 2.3 7.2 4.9 1.4 1 0 0 1 1 1 0 Transmembrane protein 237 IPK PF03770.16 ORF7566 - 0.013 15.4 1.7 0.022 14.6 1.7 1.4 1 1 0 1 1 1 0 Inositol polyphosphate kinase AAA_22 PF13401.6 ORF7566 - 0.02 15.2 0.9 0.029 14.6 0.3 1.6 2 0 0 2 2 2 0 AAA domain DUF4760 PF15956.5 ORF74113 - 0.069 13.3 0.1 0.11 12.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4760) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks80.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks80.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks80.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks80.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SKA2 PF16740.5 ORF72958 - 4.1e-05 23.3 7.0 5.9e-05 22.8 5.8 1.7 1 1 1 2 2 2 1 Spindle and kinetochore-associated protein 2 TMF_TATA_bd PF12325.8 ORF72958 - 0.0011 19.2 12.7 0.0015 18.7 12.7 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding GOLGA2L5 PF15070.6 ORF72958 - 0.023 13.4 4.4 0.033 12.9 4.4 1.2 1 0 0 1 1 1 0 Putative golgin subfamily A member 2-like protein 5 HAUS-augmin3 PF14932.6 ORF72958 - 0.13 11.8 5.8 0.2 11.2 5.8 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 KASH_CCD PF14662.6 ORF72958 - 0.13 12.0 12.7 0.26 11.1 12.7 1.3 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH bZIP_2 PF07716.15 ORF72958 - 0.15 12.2 0.7 0.15 12.2 0.7 2.3 2 0 0 2 2 2 0 Basic region leucine zipper YabA PF06156.13 ORF72958 - 0.16 12.6 7.9 0.21 12.2 1.3 2.1 1 1 1 2 2 2 0 Initiation control protein YabA UPF0242 PF06785.11 ORF72958 - 0.18 11.9 8.2 0.26 11.4 8.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ZapB PF06005.12 ORF72958 - 0.21 12.1 11.5 0.085 13.3 7.0 2.1 1 1 1 2 2 2 0 Cell division protein ZapB TSC22 PF01166.18 ORF72958 - 0.27 11.6 7.6 1.3 9.3 3.7 3.0 2 1 1 3 3 3 0 TSC-22/dip/bun family SHE3 PF17078.5 ORF72958 - 0.76 9.5 6.0 1.6 8.4 6.0 1.4 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 ADIP PF11559.8 ORF72958 - 1.3 9.1 11.9 0.17 12.0 4.4 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding HALZ PF02183.18 ORF72958 - 1.3 9.3 6.3 8.5 6.7 0.2 2.4 2 0 0 2 2 2 0 Homeobox associated leucine zipper bZIP_1 PF00170.21 ORF72958 - 2.8 8.1 9.2 1.1 9.4 3.4 2.5 2 1 0 2 2 2 0 bZIP transcription factor HIP1_clath_bdg PF16515.5 ORF72958 - 7.8 7.2 12.3 1.5 9.5 2.4 2.4 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF617 PF04759.13 ORF71671 - 0.16 12.0 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF617 PDZ_6 PF17820.1 ORF71413 - 0.0041 16.9 0.0 0.45 10.4 0.0 2.6 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF71413 - 0.0065 16.8 1.0 2.3 8.6 0.1 2.8 2 2 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF71413 - 0.095 13.0 0.0 4.6 7.6 0.0 2.3 2 0 0 2 2 2 0 PDZ domain PsbI PF02532.14 ORF71058 - 0.0097 15.8 4.6 1.5 8.8 1.7 2.5 2 0 0 2 2 2 2 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) PufQ PF05398.11 ORF71058 - 1.4 9.1 3.9 56 4.0 0.5 3.2 3 0 0 3 3 3 0 PufQ cytochrome subunit 2OG-FeII_Oxy_3 PF13640.6 ORF70872 - 0.00045 21.0 0.0 0.00066 20.5 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF70872 - 0.098 13.1 0.0 0.16 12.4 0.0 1.4 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily WD40 PF00400.32 ORF70567 - 1.3e-21 76.4 8.0 2.3e-05 25.1 0.1 4.8 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF70567 - 5.3e-08 33.1 0.5 3.3e-05 24.1 0.1 3.2 1 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF70567 - 0.00011 22.1 0.1 0.35 10.7 0.0 2.1 1 1 1 2 2 2 2 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 ORF70567 - 0.033 13.1 0.0 0.089 11.7 0.0 2.0 1 1 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein PseudoU_synth_2 PF00849.22 ORF68168 - 4.5e-18 65.8 0.0 7e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 ORF68168 - 1.3e-09 37.6 0.1 2.5e-09 36.7 0.1 1.5 1 0 0 1 1 1 1 S4 domain MORN PF02493.20 ORF67112 - 1.2e-07 31.2 14.2 6.4e-05 22.6 0.2 4.7 5 0 0 5 5 5 3 MORN repeat BTB PF00651.31 ORF66298 - 6.6e-13 48.9 0.1 1.3e-12 48.0 0.1 1.5 1 0 0 1 1 1 1 BTB/POZ domain Skp1_POZ PF03931.15 ORF66298 - 0.0055 16.9 0.2 0.01 16.0 0.2 1.4 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain SAM_3 PF18016.1 ORF66298 - 0.066 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Glyco_transf_8 PF01501.20 ORF65277 - 0.11 12.1 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 8 EamA PF00892.20 ORF65031 - 2.1e-06 28.0 23.7 1.7e-05 25.0 3.8 3.3 3 1 0 3 3 3 2 EamA-like transporter family Nuc_sug_transp PF04142.15 ORF65031 - 0.0049 16.1 0.2 0.0091 15.2 0.2 1.5 1 0 0 1 1 1 1 Nucleotide-sugar transporter Mg_trans_NIPA PF05653.14 ORF65031 - 0.0072 15.5 8.6 0.014 14.5 1.6 2.1 2 0 0 2 2 2 2 Magnesium transporter NIPA SpoIIM PF01944.17 ORF65031 - 3.2 7.8 14.9 0.043 13.8 6.1 2.2 2 1 0 2 2 2 0 Stage II sporulation protein M Ank_5 PF13857.6 ORF6484 - 0.00061 20.0 0.1 0.0017 18.6 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF6484 - 0.003 18.1 0.0 0.0045 17.6 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF6484 - 0.011 16.1 0.4 0.11 13.0 0.0 2.4 2 0 0 2 2 2 0 Ankyrin repeat Ank_4 PF13637.6 ORF6484 - 0.08 13.6 0.0 0.22 12.2 0.0 1.7 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Ax_dynein_light PF10211.9 ORF63358 - 1.8e-75 253.0 8.0 2.1e-75 252.8 8.0 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain Lipoprotein_7 PF01540.16 ORF63358 - 0.0024 17.2 1.8 0.0029 16.9 1.8 1.1 1 0 0 1 1 1 1 Adhesin lipoprotein HBM PF16591.5 ORF63358 - 0.0028 17.1 0.8 0.005 16.3 0.5 1.5 1 1 0 1 1 1 1 Helical bimodular sensor domain ApoLp-III PF07464.11 ORF63358 - 0.019 15.0 2.6 0.035 14.2 2.6 1.4 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) CREPT PF16566.5 ORF63358 - 0.059 13.5 7.9 0.29 11.3 0.7 2.3 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour AKNA PF12443.8 ORF63358 - 0.062 14.0 0.7 0.16 12.6 0.3 1.8 1 1 0 1 1 1 0 AT-hook-containing transcription factor FapA PF03961.13 ORF63358 - 0.16 10.6 2.9 0.21 10.2 2.9 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A KLRAQ PF10205.9 ORF63358 - 0.38 11.0 6.3 0.5 10.6 4.1 1.9 2 0 0 2 2 2 0 Predicted coiled-coil domain-containing protein COG2 PF06148.11 ORF63358 - 0.75 9.9 5.4 19 5.4 0.2 2.9 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4472 PF14739.6 ORF63358 - 2.2 9.0 9.9 0.48 11.2 6.6 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4472) Exonuc_VII_L PF02601.15 ORF63358 - 2.9 7.4 6.7 6.3 6.3 6.5 1.8 2 1 0 2 2 2 0 Exonuclease VII, large subunit DUF4164 PF13747.6 ORF6204 - 0.006 16.8 4.5 0.006 16.8 4.5 3.5 1 1 2 3 3 3 2 Domain of unknown function (DUF4164) DUF3584 PF12128.8 ORF6204 - 0.022 12.3 27.2 0.024 12.2 27.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF883 PF05957.13 ORF6204 - 0.098 13.3 12.2 0.25 12.0 1.5 3.1 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF883) Viral_P18 PF04521.13 ORF6204 - 0.81 9.5 8.2 0.12 12.2 2.0 2.5 1 1 1 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein FliJ PF02050.16 ORF6204 - 1.2 9.3 31.5 1.6 9.0 5.9 3.5 1 1 2 3 3 3 0 Flagellar FliJ protein Prominin PF05478.11 ORF6204 - 3.3 5.6 19.9 4.4 5.1 4.1 1.7 1 1 1 2 2 2 0 Prominin FHIPEP PF00771.20 ORF6204 - 6.5 5.1 14.6 63 1.8 14.6 1.9 1 1 0 1 1 1 0 FHIPEP family GBP_C PF02841.14 ORF6204 - 8.6 5.7 39.4 0.4 10.0 13.6 2.9 1 1 1 2 2 2 0 Guanylate-binding protein, C-terminal domain LRR_8 PF13855.6 ORF61801 - 1.2e-22 79.4 25.4 1.2e-10 41.0 4.1 4.3 2 1 3 5 5 5 5 Leucine rich repeat LRR_4 PF12799.7 ORF61801 - 2.6e-12 46.7 25.6 2.5e-06 27.7 3.2 5.3 2 1 4 6 6 6 5 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF61801 - 4.7e-05 23.4 26.1 0.58 10.9 0.2 7.4 8 0 0 8 8 8 3 Leucine Rich Repeat RsmF_methylt_CI PF17126.5 ORF61801 - 0.00027 20.9 1.6 3 8.0 0.0 5.4 2 1 4 6 6 6 1 RsmF rRNA methyltransferase first C-terminal domain LRR_9 PF14580.6 ORF61801 - 0.0024 17.4 7.7 0.013 15.0 0.3 2.8 1 1 2 3 3 3 2 Leucine-rich repeat Aminotran_1_2 PF00155.21 ORF61069 - 0.00057 19.2 0.0 0.0007 18.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Caldesmon PF02029.15 ORF58491 - 3.5 6.3 47.7 4.4 6.0 47.7 1.2 1 0 0 1 1 1 0 Caldesmon ABC_tran PF00005.27 ORF58374 - 1.5e-31 109.7 0.0 2.6e-31 109.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF58374 - 1.5e-07 31.5 0.3 0.0069 16.2 0.2 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 ORF58374 - 0.00027 21.3 1.4 0.0013 19.2 1.3 2.1 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 ORF58374 - 0.0013 18.3 0.1 0.21 11.0 0.0 2.2 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF58374 - 0.0019 17.9 1.5 0.0051 16.5 1.5 1.8 1 1 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF58374 - 0.0023 18.5 0.1 0.0044 17.5 0.1 1.4 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 ORF58374 - 0.0023 18.0 0.1 0.032 14.3 0.0 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_5 PF07728.14 ORF58374 - 0.003 17.6 0.1 0.0083 16.1 0.1 1.9 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) NACHT PF05729.12 ORF58374 - 0.0035 17.3 0.1 0.0087 16.0 0.0 1.7 2 0 0 2 2 2 1 NACHT domain AAA_18 PF13238.6 ORF58374 - 0.0048 17.4 0.1 0.015 15.8 0.0 1.9 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 ORF58374 - 0.0056 16.6 0.0 1 9.2 0.0 2.2 2 0 0 2 2 2 1 NTPase RsgA_GTPase PF03193.16 ORF58374 - 0.0071 16.3 0.5 0.02 14.8 0.2 1.9 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 ORF58374 - 0.0086 16.4 0.9 0.059 13.6 0.9 2.2 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 ORF58374 - 0.012 15.4 0.0 0.046 13.4 0.0 1.9 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_28 PF13521.6 ORF58374 - 0.013 15.8 0.4 0.033 14.4 0.0 1.9 2 1 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 ORF58374 - 0.015 15.5 0.2 0.077 13.2 0.2 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_33 PF13671.6 ORF58374 - 0.018 15.2 2.6 0.065 13.4 2.3 2.4 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF58374 - 0.02 14.6 0.4 0.067 12.9 0.0 2.1 2 1 0 3 3 3 0 AAA domain AAA_25 PF13481.6 ORF58374 - 0.049 13.2 0.2 0.7 9.4 0.0 2.6 2 1 1 3 3 3 0 AAA domain AAA_24 PF13479.6 ORF58374 - 0.08 12.7 0.2 0.19 11.4 0.1 1.7 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 ORF58374 - 0.12 11.8 0.4 0.81 9.0 0.1 2.0 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI cobW PF02492.19 ORF58374 - 0.12 11.9 0.3 0.25 10.9 0.3 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain G-alpha PF00503.20 ORF58374 - 0.13 11.4 0.2 0.21 10.7 0.1 1.3 1 1 0 1 1 1 0 G-protein alpha subunit RNA_helicase PF00910.22 ORF58374 - 0.19 12.1 0.0 0.47 10.9 0.0 1.8 2 0 0 2 2 1 0 RNA helicase Ank_2 PF12796.7 ORF54269 - 1.8e-21 76.5 0.7 1.7e-08 34.9 0.0 3.9 1 1 3 4 4 4 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF54269 - 4.9e-17 61.8 0.6 1.3e-07 31.7 0.0 4.6 2 2 3 5 5 5 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF54269 - 2.6e-12 47.0 0.0 6.6e-05 23.4 0.0 4.6 3 2 1 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF54269 - 6.6e-12 45.3 0.4 0.25 11.9 0.1 6.3 6 1 0 6 6 6 3 Ankyrin repeat Ank_3 PF13606.6 ORF54269 - 7.4e-06 25.9 0.0 1.8 9.4 0.0 5.0 5 1 0 5 5 5 1 Ankyrin repeat HicA_toxin PF07927.12 ORF54269 - 0.017 15.1 4.5 25 5.0 0.0 5.0 4 2 1 6 6 6 0 HicA toxin of bacterial toxin-antitoxin, Transglycosylas PF06737.14 ORF5390 - 0.074 13.7 0.1 0.43 11.3 0.0 2.1 2 0 0 2 2 2 0 Transglycosylase-like domain DUF2072 PF09845.9 ORF53250 - 1.7 8.9 10.3 1.7 8.9 2.8 2.2 2 0 0 2 2 2 0 Zn-ribbon containing protein RPA43_OB PF17875.1 ORF53250 - 6.9 7.3 10.1 4.1 8.0 2.1 2.2 2 0 0 2 2 2 0 RPA43 OB domain in RNA Pol I KIAA1430 PF13879.6 ORF52906 - 4e-13 50.0 8.5 4e-13 50.0 8.5 2.8 2 1 0 2 2 2 1 KIAA1430 homologue DUF1324 PF07038.11 ORF5158 - 0.0058 16.8 0.0 0.013 15.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1324) ER_lumen_recept PF00810.18 ORF4990 - 1.6e-23 84.1 4.7 1.6e-23 84.1 4.7 1.5 2 0 0 2 2 2 1 ER lumen protein retaining receptor PQ-loop PF04193.14 ORF4990 - 4.1e-06 26.5 1.0 0.0027 17.4 0.1 2.9 2 0 0 2 2 2 2 PQ loop repeat UIM PF02809.20 ORF49643 - 0.036 14.0 0.3 0.036 14.0 0.3 2.5 3 0 0 3 3 3 0 Ubiquitin interaction motif SnoaL_2 PF12680.7 ORF49095 - 0.00019 22.0 0.2 0.0012 19.4 0.1 2.3 1 1 1 3 3 3 1 SnoaL-like domain DUF4440 PF14534.6 ORF49095 - 0.00022 21.6 0.1 0.00062 20.1 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.6 ORF49095 - 0.0011 19.3 0.0 0.028 14.7 0.0 2.4 2 0 0 2 2 2 1 SnoaL-like domain GBP_PSP PF02425.15 ORF49095 - 0.01 15.5 3.2 2.7 7.7 0.2 2.7 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide CaMKII_AD PF08332.10 ORF49095 - 0.011 15.8 0.0 0.55 10.4 0.0 2.3 2 0 0 2 2 2 0 Calcium/calmodulin dependent protein kinase II association domain FH2 PF02181.23 ORF46343 - 2.1e-24 86.4 0.0 2.2e-24 86.3 0.0 1.0 1 0 0 1 1 1 1 Formin Homology 2 Domain Integrase_Zn PF02022.19 ORF4518 - 0.023 14.7 1.8 0.083 12.9 0.8 2.2 2 0 0 2 2 2 0 Integrase Zinc binding domain TaqI_C PF12950.7 ORF4518 - 0.039 14.0 2.2 0.059 13.4 2.2 1.4 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain adh_short PF00106.25 ORF41971 - 8.8e-14 51.4 0.0 1.2e-12 47.8 0.0 2.1 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF41971 - 8.1e-07 28.8 0.0 5.5e-06 26.1 0.0 1.9 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase FATC PF02260.20 ORF41299 - 1.3e-17 63.3 0.0 2.5e-17 62.4 0.0 1.5 1 0 0 1 1 1 1 FATC domain PI3_PI4_kinase PF00454.27 ORF41299 - 4.3e-13 49.6 0.1 4.3e-13 49.6 0.1 1.6 2 0 0 2 2 2 1 Phosphatidylinositol 3- and 4-kinase peroxidase PF00141.23 ORF39068 - 1.9e-39 135.7 0.0 3.2e-39 135.0 0.0 1.3 1 1 0 1 1 1 1 Peroxidase DUF4866 PF16160.5 ORF39068 - 0.041 13.2 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4866) Velvet PF11754.8 ORF38199 - 0.035 14.0 7.8 0.042 13.8 7.8 1.2 1 0 0 1 1 1 0 Velvet factor MMU163 PF17119.5 ORF38199 - 0.083 12.0 7.4 0.13 11.4 7.4 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis BUD22 PF09073.10 ORF38199 - 0.29 10.5 18.3 0.37 10.1 18.3 1.1 1 0 0 1 1 1 0 BUD22 TFIIA PF03153.13 ORF38199 - 0.46 10.4 22.9 0.57 10.1 22.9 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Zip PF02535.22 ORF38199 - 2.2 7.4 4.3 2.3 7.3 4.3 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter ThiD2 PF17792.1 ORF38199 - 4.6 7.7 7.3 6.1 7.3 2.1 2.7 2 1 1 3 3 3 0 ThiD2 family Band_3_cyto PF07565.13 ORF38199 - 6.2 6.6 11.9 3.1 7.5 9.8 1.6 2 0 0 2 2 2 0 Band 3 cytoplasmic domain Aldolase_II PF00596.21 ORF37636 - 1.8e-46 158.4 1.1 2.2e-46 158.2 1.1 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Glyco_transf_4 PF13439.6 ORF37636 - 0.066 13.2 0.4 1.7 8.6 0.0 2.3 2 0 0 2 2 2 0 Glycosyltransferase Family 4 TPR_11 PF13414.6 ORF3735 - 4.2e-11 42.3 0.0 3.3e-05 23.5 0.0 3.4 3 0 0 3 3 3 2 TPR repeat TPR_1 PF00515.28 ORF3735 - 1.4e-10 40.5 3.4 8.4e-05 22.2 0.0 3.8 4 0 0 4 4 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF3735 - 1.3e-08 34.3 6.4 0.00084 19.3 0.2 3.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF3735 - 8.6e-07 29.3 9.9 0.013 16.2 0.9 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF3735 - 0.00027 21.1 1.6 2.5 8.7 0.0 3.8 3 1 1 4 4 4 2 Tetratricopeptide repeat DUF627 PF04781.12 ORF3735 - 0.0009 19.2 0.1 0.0013 18.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF627) TPR_8 PF13181.6 ORF3735 - 0.0012 18.9 0.7 1.8 8.9 0.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF3735 - 0.0028 18.3 13.9 0.086 13.5 2.0 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF3735 - 0.0037 17.7 3.8 0.88 10.1 0.2 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF3735 - 0.011 15.9 2.5 3.9 7.7 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF3735 - 0.047 13.7 1.0 4.4 7.6 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF3735 - 1.3 9.3 5.9 13 6.2 0.3 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat Ion_trans PF00520.31 ORF35224 - 2.1e-12 46.8 2.4 2.4e-12 46.6 2.4 1.1 1 0 0 1 1 1 1 Ion transport protein Phage_holin_3_5 PF16085.5 ORF35224 - 0.018 15.2 1.4 0.033 14.3 0.4 1.9 1 1 0 1 1 1 0 Bacteriophage holin Hol, superfamily III HTH_Tnp_Mu_1 PF02316.16 ORF28863 - 0.069 13.3 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Mu DNA-binding domain KH_1 PF00013.29 ORF27714 - 8.5e-10 38.3 0.0 5.2e-08 32.6 0.0 2.4 2 0 0 2 2 2 2 KH domain PH_12 PF16457.5 ORF2735 - 0.94 10.0 7.0 0.31 11.6 2.6 2.2 2 0 0 2 2 2 0 Pleckstrin homology domain IF4E PF01652.18 ORF27055 - 7.7e-42 142.8 0.3 1e-41 142.4 0.3 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E DUF4734 PF15881.5 ORF27055 - 0.099 12.8 1.1 0.75 10.0 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4734) SKA2 PF16740.5 ORF27040 - 0.053 13.3 2.6 0.22 11.3 0.2 2.5 3 0 0 3 3 3 0 Spindle and kinetochore-associated protein 2 MGTL PF17059.5 ORF27040 - 7.9 6.5 5.7 1.6 8.6 0.7 2.2 2 0 0 2 2 2 0 MgtA leader peptide AAA_lid_8 PF17868.1 ORF26763 - 8.8e-08 31.9 0.0 1.6e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 AAA lid domain DUF1180 PF06679.12 ORF25635 - 2 8.8 9.1 0.063 13.7 2.3 1.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1180) AMP-binding_C PF13193.6 ORF23674 - 3.4e-27 95.2 0.1 5e-27 94.7 0.1 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF23674 - 8.2e-16 57.6 0.0 1.3e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme UBA PF00627.31 ORF22665 - 0.0023 17.8 0.1 0.006 16.5 0.1 1.8 1 0 0 1 1 1 1 UBA/TS-N domain OKR_DC_1_C PF03711.15 ORF22665 - 0.035 14.4 1.1 0.072 13.4 1.1 1.5 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, C-terminal domain UIM PF02809.20 ORF22665 - 0.065 13.2 0.7 0.065 13.2 0.7 4.0 3 0 0 3 3 3 0 Ubiquitin interaction motif AAA_lid_1 PF17857.1 ORF22665 - 0.15 12.3 1.6 0.29 11.4 1.6 1.6 1 0 0 1 1 1 0 AAA+ lid domain DUF2151 PF10221.9 ORF22665 - 0.28 9.7 8.7 0.33 9.5 8.7 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator DUF2175 PF09943.9 ORF22665 - 1.8 8.9 6.0 0.89 9.9 3.4 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) DUF3291 PF11695.8 ORF22643 - 0.11 12.2 0.1 0.2 11.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3291) Asp PF00026.23 ORF21639 - 2e-13 50.5 0.0 2.4e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF21639 - 0.00094 19.0 0.0 0.0015 18.3 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal HpcH_HpaI PF03328.14 ORF21341 - 4.9e-42 143.5 0.0 5.5e-42 143.4 0.0 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family RHH_8 PF17723.1 ORF21341 - 0.084 13.1 0.0 0.22 11.7 0.0 1.5 1 1 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family G10 PF01125.17 ORF17067 - 6.2e-44 149.3 0.8 8.8e-44 148.8 0.8 1.2 1 0 0 1 1 1 1 G10 protein PSII_Pbs31 PF18240.1 ORF16899 - 0.21 12.1 0.2 0.21 12.1 0.2 2.9 2 2 1 3 3 3 0 Photosystem II Psb31 protein 3HCDH_N PF02737.18 ORF16692 - 8.2e-25 87.7 0.0 1.1e-24 87.3 0.0 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 ORF16692 - 5.4e-14 52.6 0.0 9.8e-14 51.7 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HTH_Tnp_Mu_1 PF02316.16 ORF16388 - 0.069 13.3 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Mu DNA-binding domain DUF2207 PF09972.9 ORF15576 - 0.0033 16.3 1.2 0.0042 15.9 1.2 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) SARAF PF06682.12 ORF15576 - 0.017 14.8 0.0 0.021 14.5 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis TMIE PF16038.5 ORF15576 - 0.037 13.9 0.1 0.16 11.8 0.1 2.0 2 0 0 2 2 2 0 TMIE protein DUF4834 PF16118.5 ORF15576 - 0.13 13.2 3.3 1.1 10.2 3.3 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DUF3671 PF12420.8 ORF15576 - 1.8 8.7 8.8 2.3 8.3 7.9 1.7 1 1 0 1 1 1 0 Protein of unknown function Asp PF00026.23 ORF12759 - 1e-14 54.7 0.0 1.2e-14 54.4 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF12759 - 0.0009 19.1 0.0 0.0015 18.3 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Smr PF01713.21 ORF12679 - 1.6e-08 34.8 0.5 3.2e-08 33.8 0.5 1.5 1 0 0 1 1 1 1 Smr domain PPR PF01535.20 ORF12679 - 9.4e-08 31.8 0.1 0.011 16.0 0.1 3.5 3 0 0 3 3 3 2 PPR repeat PPR_2 PF13041.6 ORF12679 - 4.6e-06 26.7 0.0 0.00052 20.2 0.0 2.9 1 1 2 3 3 3 1 PPR repeat family PPR_3 PF13812.6 ORF12679 - 0.00011 22.1 0.0 0.21 11.7 0.0 3.1 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF12679 - 0.0043 16.7 0.0 2.8 7.7 0.0 2.7 3 0 0 3 3 3 2 PPR repeat Metallophos_2 PF12850.7 ORF108565 - 0.13 12.5 0.1 0.17 12.0 0.1 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain MotCF PF09158.10 ORF108565 - 0.18 11.9 0.0 0.42 10.7 0.0 1.5 2 0 0 2 2 2 0 Bacteriophage T4 MotA, C-terminal MORN PF02493.20 ORF108493 - 6.2e-50 164.2 66.8 1.8e-08 33.8 1.9 9.9 10 0 0 10 10 10 9 MORN repeat DEADboxA PF12343.8 ORF108493 - 6.7 7.3 13.1 1.5 9.4 2.9 3.7 1 1 1 2 2 2 0 Cold shock protein DEAD box A DUF523 PF04463.12 ORF108493 - 8.7 6.4 5.8 41 4.2 0.0 3.9 3 2 1 4 4 4 0 Protein of unknown function (DUF523) Kelch_1 PF01344.25 ORF108078 - 1.4e-19 69.4 10.7 1.1e-08 34.5 0.1 4.6 5 0 0 5 5 5 2 Kelch motif Kelch_6 PF13964.6 ORF108078 - 3.2e-16 59.0 2.6 9.6e-06 25.7 0.0 4.3 3 1 1 4 4 4 2 Kelch motif Kelch_5 PF13854.6 ORF108078 - 9.2e-09 35.1 6.6 0.009 16.0 0.2 4.2 4 0 0 4 4 4 3 Kelch motif Kelch_4 PF13418.6 ORF108078 - 3.4e-07 30.2 4.3 0.0015 18.5 0.0 4.2 3 1 1 4 4 4 2 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF108078 - 1.1e-06 28.3 1.8 0.27 11.3 0.1 4.2 4 0 0 4 4 4 2 Kelch motif Glyoxal_oxid_N PF07250.11 ORF108078 - 0.053 12.7 0.1 0.38 9.9 0.0 2.1 1 1 0 2 2 2 0 Glyoxal oxidase N-terminus AMP-binding_C PF13193.6 ORF1028 - 3.4e-27 95.2 0.1 5e-27 94.7 0.1 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF1028 - 8.2e-16 57.6 0.0 1.3e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme RHIM PF12721.7 NODE_31636_length_688_cov_2.839204_g25082_i0forward_frame_1 - 0.14 12.7 4.0 0.24 11.9 0.1 2.5 2 0 0 2 2 2 0 RIP homotypic interaction motif PPP5 PF08321.12 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_1 - 5e-05 23.5 0.3 0.00012 22.3 0.1 1.8 2 0 0 2 2 2 1 PPP5 TPR repeat region E7R PF17467.2 NODE_31630_length_688_cov_7.494640_g25076_i0reverse_frame_1 - 0.057 13.6 1.7 0.74 10.0 0.6 2.6 2 0 0 2 2 2 0 Viral Protein E7 MutS_III PF05192.18 NODE_31630_length_688_cov_7.494640_g25076_i0forward_frame_1 - 7.6e-12 45.8 0.2 1e-11 45.4 0.2 1.2 1 0 0 1 1 1 1 MutS domain III DUF2076 PF09849.9 NODE_31619_length_688_cov_91.852986_g25065_i0reverse_frame_1 - 6.2 6.8 5.7 2.9 7.9 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2076) PMP1_2 PF08114.11 NODE_31600_length_688_cov_224.058193_g25047_i0reverse_frame_1 - 2.3 8.0 5.4 2.8 7.8 0.1 2.8 3 0 0 3 3 3 0 ATPase proteolipid family CSN7a_helixI PF18392.1 NODE_31597_length_688_cov_257.900459_g25044_i0forward_frame_1 - 6.2e-07 29.2 0.8 1.1e-06 28.4 0.2 1.7 2 0 0 2 2 2 1 COP9 signalosome complex subunit 7a helix I domain PCI PF01399.27 NODE_31597_length_688_cov_257.900459_g25044_i0forward_frame_1 - 4.4e-06 27.1 0.1 9e-06 26.1 0.1 1.5 1 0 0 1 1 1 1 PCI domain HU-CCDC81_bac_2 PF18175.1 NODE_31597_length_688_cov_257.900459_g25044_i0forward_frame_1 - 0.0069 16.2 0.1 0.018 14.9 0.1 1.7 2 0 0 2 2 2 1 CCDC81-like prokaryotic HU domain 2 MIP-T3_C PF17749.1 NODE_31597_length_688_cov_257.900459_g25044_i0forward_frame_1 - 0.013 15.5 0.8 0.027 14.4 0.8 1.5 1 0 0 1 1 1 0 Microtubule-binding protein MIP-T3 C-terminal region UPF0158 PF03682.13 NODE_31530_length_690_cov_78.590840_g24991_i0reverse_frame_1 - 0.0079 16.2 0.3 0.012 15.6 0.3 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0158) hSac2 PF12456.8 NODE_31496_length_691_cov_2.818598_g24964_i0reverse_frame_3 - 0.016 14.9 3.3 0.24 11.1 0.3 2.3 2 0 0 2 2 2 0 Inositol phosphatase CENP-H PF05837.12 NODE_31496_length_691_cov_2.818598_g24964_i0reverse_frame_3 - 0.028 14.8 1.1 0.028 14.8 1.1 2.2 3 0 0 3 3 3 0 Centromere protein H (CENP-H) Nup54_C PF18437.1 NODE_31496_length_691_cov_2.818598_g24964_i0reverse_frame_3 - 6.9 6.7 12.8 0.16 11.9 2.0 3.2 2 1 1 3 3 3 0 Nup54 C-terminal interacting domain Phage_TAC_10 PF10963.8 NODE_31494_length_691_cov_2.957317_g24962_i0reverse_frame_2 - 0.02 15.0 0.1 0.048 13.9 0.1 1.6 1 0 0 1 1 1 0 Phage tail assembly chaperone UPF0370 PF13980.6 NODE_31487_length_691_cov_59.663110_g24955_i0forward_frame_3 - 4 7.5 7.8 4.9 7.3 1.1 2.9 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0370) GATA PF00320.27 NODE_31467_length_691_cov_197.902439_g24937_i0forward_frame_3 - 0.085 12.5 3.2 0.41 10.3 0.1 2.6 2 0 0 2 2 2 0 GATA zinc finger TraF_2 PF13729.6 NODE_31445_length_692_cov_4.604262_g24919_i0reverse_frame_2 - 0.019 14.4 0.2 0.023 14.1 0.2 1.1 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein HRG PF16954.5 NODE_31443_length_692_cov_52.675799_g24917_i0forward_frame_2 - 0.13 12.6 0.3 0.23 11.9 0.3 1.3 1 0 0 1 1 1 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene DUF3695 PF12494.8 NODE_31434_length_692_cov_91.838661_g24908_i0forward_frame_3 - 0.00045 20.0 3.2 0.00071 19.4 3.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3695) Med19 PF10278.9 NODE_31434_length_692_cov_91.838661_g24908_i0forward_frame_3 - 1.1 9.1 20.3 1.7 8.6 20.3 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF3941 PF13081.6 NODE_31402_length_693_cov_4.123100_g24882_i0reverse_frame_3 - 0.7 10.3 3.5 2.9 8.4 0.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3941) PG_binding_2 PF08823.11 NODE_31391_length_693_cov_97.408815_g24871_i0forward_frame_2 - 0.0095 16.2 0.0 0.14 12.5 0.0 2.5 1 1 1 2 2 2 1 Putative peptidoglycan binding domain EF-hand_1 PF00036.32 ORF9995 - 4.4e-06 25.9 2.2 7e-06 25.2 0.7 2.1 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF9995 - 8.7e-06 25.3 2.2 0.00022 20.9 0.5 3.0 3 0 0 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 ORF9995 - 1.5e-05 25.3 7.1 0.0036 17.7 2.2 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF9995 - 0.0007 19.4 1.4 0.0032 17.3 0.4 2.4 2 1 1 3 3 3 1 EF-hand domain pair SASP_gamma PF04259.14 ORF9995 - 0.062 13.8 0.1 0.1 13.1 0.1 1.3 1 0 0 1 1 1 0 Small, acid-soluble spore protein, gamma-type EF-hand_5 PF13202.6 ORF9995 - 0.083 12.4 0.4 0.19 11.3 0.4 1.5 1 0 0 1 1 1 0 EF hand CCD48 PF15799.5 ORF9995 - 0.26 9.5 0.0 0.34 9.2 0.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 Sec20 PF03908.13 ORF99693 - 0.2 11.6 1.3 0.44 10.5 0.1 2.2 2 0 0 2 2 2 0 Sec20 FapA PF03961.13 ORF99693 - 0.22 10.1 6.4 0.26 9.8 6.4 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A GARS_A PF01071.19 ORF98644 - 1.4e-41 142.4 0.1 2e-41 141.9 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_C PF02843.16 ORF98644 - 5.6e-31 106.7 0.0 8.3e-31 106.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain ArsA_ATPase PF02374.15 ORF98418 - 1.7e-72 244.2 0.7 1.9e-72 244.1 0.7 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.6 ORF98418 - 7.7e-12 45.5 0.0 1.3e-11 44.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 ORF98418 - 4.4e-07 30.0 0.1 5.1e-07 29.8 0.1 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 ORF98418 - 0.00026 20.5 0.0 0.00045 19.8 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NB-ARC PF00931.22 ORF98418 - 0.00047 19.4 0.1 0.00087 18.5 0.1 1.4 1 0 0 1 1 1 1 NB-ARC domain SRP54 PF00448.22 ORF98418 - 0.00055 19.6 0.0 0.025 14.2 0.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain CBP_BcsQ PF06564.12 ORF98418 - 0.00089 18.8 0.0 0.0019 17.8 0.0 1.5 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ParA PF10609.9 ORF98418 - 0.0032 17.0 0.2 0.0067 15.9 0.2 1.5 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Zeta_toxin PF06414.12 ORF98418 - 0.0038 16.5 0.0 0.0068 15.7 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_18 PF13238.6 ORF98418 - 0.06 13.9 0.0 0.1 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 ORF98418 - 0.069 12.6 0.0 0.13 11.7 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA_25 PF13481.6 ORF98418 - 0.15 11.6 1.0 0.72 9.4 1.0 2.0 1 1 0 1 1 1 0 AAA domain Ac76 PF05814.11 ORF93403 - 0.033 14.2 0.3 0.099 12.7 0.1 1.9 2 0 0 2 2 2 0 Orf76 (Ac76) NAD-GH PF10712.9 ORF92718 - 5.6e-63 213.3 8.2 6.7e-63 213.0 8.2 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Ras PF00071.22 ORF91058 - 7.5e-61 204.5 2.1 9.2e-61 204.2 2.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF91058 - 5.5e-36 123.4 0.4 9.4e-36 122.7 0.4 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF91058 - 2.8e-14 52.9 0.3 4e-14 52.4 0.3 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF91058 - 1.5e-07 31.5 0.2 3e-07 30.5 0.1 1.6 1 1 1 2 2 2 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF91058 - 1.1e-05 25.0 0.5 1.5e-05 24.5 0.5 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF91058 - 0.00019 21.4 2.3 0.018 15.0 0.0 2.6 2 1 1 3 3 3 1 RsgA GTPase AAA_16 PF13191.6 ORF91058 - 0.0017 18.8 0.1 0.0037 17.7 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF91058 - 0.0024 18.2 0.4 0.036 14.3 0.1 2.5 1 1 1 2 2 2 1 AAA domain SRPRB PF09439.10 ORF91058 - 0.012 15.0 0.5 0.071 12.5 0.1 2.0 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit PduV-EutP PF10662.9 ORF91058 - 0.013 15.3 0.1 0.026 14.2 0.0 1.6 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation DUF4504 PF14953.6 ORF91058 - 0.021 14.2 0.6 0.028 13.8 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4504) DUF1512 PF07431.12 ORF91058 - 0.031 13.3 0.2 0.069 12.1 0.5 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1512) AAA_24 PF13479.6 ORF91058 - 0.043 13.6 0.9 0.092 12.5 0.9 1.9 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF91058 - 0.074 12.6 0.0 0.18 11.3 0.0 1.5 2 0 0 2 2 2 0 P-loop containing dynein motor region FeoB_N PF02421.18 ORF91058 - 0.077 12.5 0.5 0.18 11.3 0.5 1.7 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_5 PF07728.14 ORF91058 - 0.1 12.6 0.1 0.29 11.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 ORF91058 - 0.13 12.7 3.9 0.69 10.4 3.9 2.1 1 1 0 1 1 1 0 ABC transporter INTS5_N PF14837.6 ORF8922 - 0.0018 17.9 1.4 0.78 9.3 0.2 2.3 2 1 0 2 2 2 2 Integrator complex subunit 5 N-terminus HetR_C PF18460.1 ORF8922 - 0.017 15.0 1.2 0.32 10.9 0.2 2.3 2 0 0 2 2 2 0 Heterocyst differentiation regulator C-terminal Hood domain 2OG-FeII_Oxy PF03171.20 ORF8922 - 0.077 13.5 0.0 0.13 12.8 0.0 1.3 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily ApoC-I PF04691.12 ORF8922 - 0.66 9.9 3.5 12 5.9 0.2 3.2 3 0 0 3 3 3 0 Apolipoprotein C-I (ApoC-1) DUF269 PF03270.13 ORF8922 - 2.4 8.3 4.3 0.57 10.3 0.3 2.0 3 0 0 3 3 3 0 Protein of unknown function, DUF269 ARGLU PF15346.6 ORF8922 - 7 6.5 8.9 0.87 9.5 2.3 2.2 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 Alba PF01918.21 ORF88347 - 5.5e-11 42.1 0.2 8.6e-11 41.5 0.2 1.3 1 0 0 1 1 1 1 Alba DUF5320 PF17253.2 ORF88347 - 0.17 13.0 13.3 2.3 9.3 6.9 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5320) NAD-GH PF10712.9 ORF87702 - 5.6e-63 213.3 8.2 6.7e-63 213.0 8.2 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Alba PF01918.21 ORF87580 - 5.5e-11 42.1 0.2 8.6e-11 41.5 0.2 1.3 1 0 0 1 1 1 1 Alba DUF5320 PF17253.2 ORF87580 - 0.17 13.0 13.3 2.3 9.3 6.9 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5320) NAD-GH PF10712.9 ORF85916 - 5.6e-63 213.3 8.2 6.7e-63 213.0 8.2 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase HSP70 PF00012.20 ORF85263 - 0.002 16.4 0.0 0.0024 16.1 0.0 1.1 1 0 0 1 1 1 1 Hsp70 protein Glyco_hydro_20 PF00728.22 ORF8292 - 1.9e-34 119.6 4.0 8.8e-34 117.4 4.0 1.8 1 1 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain Helicase_C PF00271.31 ORF82392 - 3.8e-14 53.0 0.0 6.5e-14 52.2 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF82392 - 1.4e-05 24.5 0.0 1.7e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase zf-C3HC4_2 PF13923.6 ORF82392 - 0.0013 18.5 0.1 0.0027 17.5 0.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF82392 - 0.0028 17.4 0.2 0.0062 16.2 0.2 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF82392 - 0.0075 16.1 0.2 0.012 15.4 0.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF82392 - 0.021 15.1 0.6 0.043 14.1 0.6 1.5 1 0 0 1 1 1 0 Ring finger domain zf-RING_5 PF14634.6 ORF82392 - 0.18 11.8 0.3 0.34 10.9 0.3 1.4 1 0 0 1 1 1 0 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF82392 - 0.39 10.8 1.4 1 9.5 1.4 1.8 1 1 0 1 1 1 0 RING-type zinc-finger FtsX PF02687.21 ORF80140 - 0.00053 20.4 0.4 0.00053 20.4 0.4 2.1 2 1 0 2 2 2 1 FtsX-like permease family LicD PF04991.13 ORF79667 - 0.45 10.6 10.3 0.62 10.2 10.3 1.3 1 0 0 1 1 1 0 LicD family DUF4491 PF14898.6 ORF7913 - 0.11 12.9 2.8 0.26 11.7 2.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) DUF3788 PF12663.7 ORF79080 - 0.037 14.0 2.6 0.04 13.9 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3788) PI3K_P85_iSH2 PF16454.5 ORF79080 - 0.052 13.1 9.1 0.1 12.2 9.1 1.4 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF3937 PF13073.6 ORF79080 - 0.053 13.7 0.2 0.4 10.8 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3937) FTCD_C PF04961.12 ORF79080 - 0.15 11.8 0.5 0.33 10.7 0.5 1.6 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase NAD-GH PF10712.9 ORF78123 - 5.6e-63 213.3 8.2 6.7e-63 213.0 8.2 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase EF-hand_6 PF13405.6 ORF75557 - 0.0023 17.7 0.0 0.0086 15.9 0.0 2.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF75557 - 0.0041 16.6 0.1 0.013 15.0 0.0 1.9 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF75557 - 0.0042 16.5 0.0 0.013 15.0 0.0 1.9 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF75557 - 0.018 15.5 0.1 0.077 13.5 0.0 2.1 1 1 1 2 2 2 0 EF-hand domain pair OKR_DC_1_C PF03711.15 ORF75125 - 3.1e-47 160.2 0.0 4.1e-47 159.8 0.0 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain OKR_DC_1 PF01276.20 ORF75125 - 2.1e-24 86.0 0.1 2.6e-24 85.7 0.1 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain YbjQ_1 PF01906.17 ORF73153 - 5.1e-08 33.5 2.8 0.016 15.9 0.0 3.4 3 1 0 3 3 3 2 Putative heavy-metal-binding DUF4156 PF13698.6 ORF73153 - 0.012 15.9 0.1 0.57 10.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4156) Kelch_5 PF13854.6 ORF72664 - 7.2e-09 35.4 0.1 0.0032 17.4 0.0 2.6 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF72664 - 2.9e-08 33.6 2.5 0.0014 18.6 0.0 3.6 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF72664 - 6.4e-08 32.7 0.2 4.2e-05 23.7 0.0 3.0 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF72664 - 6.7e-07 28.8 0.7 0.022 14.4 0.2 2.8 2 1 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF72664 - 9.4e-07 28.9 4.4 0.0052 17.0 0.0 3.7 4 0 0 4 4 4 2 Kelch motif Kelch_2 PF07646.15 ORF72664 - 0.00022 21.1 0.0 0.39 10.8 0.0 2.8 2 0 0 2 2 2 2 Kelch motif DSHCT PF08148.12 ORF68870 - 1.4e-11 44.3 0.0 2.2e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 DSHCT (NUC185) domain NAD-GH PF10712.9 ORF68156 - 5.6e-63 213.3 8.2 6.7e-63 213.0 8.2 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase HSP70 PF00012.20 ORF67360 - 0.002 16.4 0.0 0.0024 16.1 0.0 1.1 1 0 0 1 1 1 1 Hsp70 protein IBR PF01485.21 ORF65658 - 1.9e-12 47.2 24.5 5.1e-06 26.6 11.2 2.5 2 1 0 2 2 2 2 IBR domain, a half RING-finger domain C1_4 PF07975.12 ORF65658 - 0.14 12.4 0.6 0.14 12.4 0.6 3.4 3 1 1 4 4 4 0 TFIIH C1-like domain DNA_ligase_A_C PF04679.15 ORF62059 - 4e-16 59.4 0.0 2e-12 47.5 0.0 2.3 1 1 0 1 1 1 1 ATP dependent DNA ligase C terminal region DUF2457 PF10446.9 ORF62059 - 0.01 15.0 4.8 0.014 14.6 4.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DNA_pol_phi PF04931.13 ORF62059 - 4.2 5.4 5.2 5.5 5.0 5.2 1.1 1 0 0 1 1 1 0 DNA polymerase phi Tetraspanin PF00335.20 ORF59750 - 7.4e-07 29.1 11.8 1.1e-06 28.6 11.8 1.2 1 0 0 1 1 1 1 Tetraspanin family AmiS_UreI PF02293.15 ORF59750 - 0.00046 20.2 6.0 0.00059 19.9 5.4 1.5 1 1 0 1 1 1 1 AmiS/UreI family transporter Ras PF00071.22 ORF59750 - 0.0064 16.1 0.0 0.009 15.6 0.0 1.2 1 0 0 1 1 1 1 Ras family 7tm_3 PF00003.22 ORF59750 - 0.0097 15.7 5.7 0.012 15.3 5.7 1.2 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR UPF0014 PF03649.13 ORF59750 - 0.021 14.2 0.2 0.03 13.7 0.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0014) DUF1129 PF06570.11 ORF59750 - 0.14 11.6 4.3 0.12 11.8 2.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) Orai-1 PF07856.12 ORF59750 - 0.44 10.2 3.9 0.75 9.5 3.9 1.5 1 1 0 1 1 1 0 Mediator of CRAC channel activity DUF373 PF04123.13 ORF59750 - 0.67 9.3 5.5 0.94 8.9 5.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF373) EF1_GNE PF00736.19 ORF5691 - 3.3e-28 97.7 0.8 6.3e-28 96.8 0.8 1.5 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain Med5 PF08689.10 ORF5691 - 0.0047 14.8 0.1 0.0051 14.7 0.1 1.1 1 0 0 1 1 1 1 Mediator complex subunit Med5 PBP1_TM PF14812.6 ORF5691 - 0.026 14.9 5.0 0.18 12.2 6.2 1.7 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal GST_C_6 PF17171.4 ORF5691 - 0.038 13.8 0.0 0.086 12.7 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain RNA_ligase PF09414.10 ORF56324 - 5.1e-14 52.9 0.1 8.5e-14 52.2 0.1 1.3 1 0 0 1 1 1 1 RNA ligase PQ-loop PF04193.14 ORF54227 - 9.3e-26 89.4 9.2 1.1e-12 47.5 3.2 2.7 3 0 0 3 3 3 2 PQ loop repeat ER_lumen_recept PF00810.18 ORF54227 - 0.0098 16.7 4.5 0.057 14.2 1.0 2.7 1 1 2 3 3 3 1 ER lumen protein retaining receptor TMEM107 PF14995.6 ORF54227 - 0.043 14.3 3.6 1.4 9.4 0.9 2.4 2 1 0 2 2 2 0 Transmembrane protein MtN3_slv PF03083.16 ORF54227 - 0.29 11.2 7.5 3.5 7.7 0.2 2.6 2 1 0 2 2 2 0 Sugar efflux transporter for intercellular exchange Wzy_C PF04932.15 ORF54227 - 1.4 8.5 6.4 1.1 8.9 4.3 2.1 1 1 1 2 2 2 0 O-Antigen ligase Choline_transpo PF04515.12 ORF53294 - 1.7e-07 30.8 1.6 2e-07 30.5 1.6 1.1 1 0 0 1 1 1 1 Plasma-membrane choline transporter NKWYS PF10364.9 ORF50975 - 0.1 12.7 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 Putative capsular polysaccharide synthesis protein UPF0175 PF03683.13 ORF50055 - 0.029 14.1 0.1 0.068 12.9 0.1 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0175) IL7 PF01415.16 ORF46560 - 0.15 12.1 5.2 0.31 11.1 5.2 1.6 1 1 0 1 1 1 0 Interleukin 7/9 family Cyclin PF08613.11 ORF43550 - 7.9e-13 49.1 0.0 8.8e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF43550 - 1.9e-06 27.6 0.3 3.4e-06 26.8 0.3 1.4 1 0 0 1 1 1 1 Cyclin, N-terminal domain Glyco_hydro38C2 PF17677.1 ORF37846 - 3.7e-05 23.7 0.0 6.6e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Glyco_hydro_38C PF07748.13 ORF37846 - 0.0014 18.7 0.0 0.0027 17.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain START PF01852.19 ORF35135 - 2.6e-12 46.6 0.1 3.2e-12 46.3 0.1 1.0 1 0 0 1 1 1 1 START domain RPM2 PF08579.11 ORF35135 - 0.045 14.1 0.6 0.073 13.5 0.6 1.3 1 0 0 1 1 1 0 Mitochondrial ribonuclease P subunit (RPM2) TPR_12 PF13424.6 ORF31773 - 2.9e-19 69.1 12.1 6.1e-10 39.3 2.9 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF31773 - 2.6e-17 62.1 17.6 5.5e-07 29.3 0.4 5.9 4 1 3 7 7 7 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF31773 - 0.0002 21.2 7.7 0.086 13.0 0.0 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF31773 - 0.00022 21.7 19.5 0.002 18.6 6.0 3.9 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF31773 - 0.00038 20.4 0.2 0.044 14.0 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF31773 - 0.00053 19.7 0.9 0.056 13.3 0.0 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF31773 - 0.00085 19.2 7.0 0.0029 17.5 0.0 4.0 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF31773 - 0.0035 17.9 9.7 0.22 12.2 0.3 3.5 2 1 0 2 2 2 1 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF31773 - 0.0045 16.4 4.4 0.029 13.8 0.1 2.8 2 1 0 2 2 2 1 Coatomer epsilon subunit TPR_14 PF13428.6 ORF31773 - 0.0067 17.1 0.1 0.0067 17.1 0.1 4.6 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF31773 - 0.011 16.3 17.9 0.073 13.7 0.6 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat HEPN_RnaseLS PF18869.1 ORF31773 - 0.15 12.2 0.1 0.28 11.3 0.1 1.5 1 0 0 1 1 1 0 RnaseLS-like HEPN YfdX PF10938.8 ORF31773 - 0.58 10.1 8.3 9.1 6.2 0.0 4.2 3 2 1 4 4 4 0 YfdX protein TPR_6 PF13174.6 ORF31773 - 2.3 9.0 7.2 77 4.3 0.1 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat SAC3_GANP PF03399.16 ORF29499 - 6.5e-13 48.7 0.9 5e-11 42.5 0.9 2.1 1 1 0 1 1 1 1 SAC3/GANP family Gliadin PF13016.6 ORF29420 - 1.5 9.3 8.6 0.35 11.3 2.7 2.6 2 1 1 3 3 3 0 Cys-rich Gliadin N-terminal AIG1 PF04548.16 ORF29420 - 3.3 7.0 4.8 1.2 8.4 1.0 1.9 2 0 0 2 2 2 0 AIG1 family Dmrt1 PF12374.8 ORF29420 - 3.7 8.1 12.5 7.4 7.1 2.4 2.8 2 1 1 3 3 3 0 Double-sex mab3 related transcription factor 1 FAM193_C PF15914.5 ORF2820 - 0.17 11.6 3.8 0.21 11.3 1.3 2.2 2 0 0 2 2 2 0 FAM193 family C-terminal Inhibitor_I24 PF10465.9 ORF27592 - 0.19 11.7 0.0 0.33 10.9 0.0 1.3 1 0 0 1 1 1 0 PinA peptidase inhibitor 2-oxogl_dehyd_N PF16078.5 ORF22082 - 7e-11 41.5 0.8 1.3e-10 40.7 0.8 1.4 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase N-terminus Flu_M1_C PF08289.11 ORF22082 - 0.015 15.5 0.5 0.049 13.8 0.1 2.0 3 0 0 3 3 3 0 Influenza Matrix protein (M1) C-terminal domain DUF4132 PF13569.6 ORF22019 - 4.6e-33 114.5 0.0 5.7e-33 114.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4132) CstA PF02554.14 ORF21417 - 3e-80 269.9 15.2 3.5e-80 269.7 15.2 1.0 1 0 0 1 1 1 1 Carbon starvation protein CstA DUF1676 PF07898.13 ORF21417 - 0.024 14.7 1.0 0.044 13.8 1.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) CPP1-like PF11833.8 ORF21417 - 0.7 9.5 12.0 0.024 14.3 2.3 2.6 2 1 1 3 3 3 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Ion_trans PF00520.31 ORF18520 - 9e-09 34.9 4.8 1.2e-08 34.6 4.8 1.1 1 0 0 1 1 1 1 Ion transport protein HR1 PF02185.16 ORF18520 - 0.0041 17.2 1.5 0.23 11.6 0.5 2.2 2 0 0 2 2 2 2 Hr1 repeat PKD_channel PF08016.12 ORF18520 - 0.16 10.7 4.2 0.19 10.4 4.2 1.1 1 0 0 1 1 1 0 Polycystin cation channel Sec5 PF15469.6 ORF18520 - 0.65 9.8 5.4 6.5 6.5 5.4 2.2 1 1 0 1 1 1 0 Exocyst complex component Sec5 DAGAT PF03982.13 ORF17587 - 2.6e-30 105.4 0.0 3e-30 105.2 0.0 1.0 1 0 0 1 1 1 1 Diacylglycerol acyltransferase RRM_1 PF00076.22 ORF16935 - 1.7e-07 30.9 0.0 2.7e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF16935 - 0.0021 18.0 0.0 0.0021 18.0 0.0 1.9 2 0 0 2 2 2 1 RNA binding motif RSB_motif PF16294.5 ORF16935 - 0.96 9.7 25.2 1.8 8.8 25.2 1.5 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif Presenilin PF01080.17 ORF16935 - 2.5 6.8 6.0 3.1 6.5 6.0 1.1 1 0 0 1 1 1 0 Presenilin SAPS PF04499.15 ORF16935 - 9.6 4.9 5.8 12 4.5 5.8 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein NAD-GH PF10712.9 ORF1480 - 5.6e-63 213.3 8.2 6.7e-63 213.0 8.2 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Ependymin PF00811.18 ORF14669 - 0.027 14.7 0.1 0.05 13.9 0.1 1.4 1 0 0 1 1 1 0 Ependymin NLE PF08154.12 ORF14669 - 0.15 12.6 0.1 7.1 7.2 0.0 2.3 2 0 0 2 2 2 0 NLE (NUC135) domain NAD-GH PF10712.9 ORF13242 - 5.6e-63 213.3 8.2 6.7e-63 213.0 8.2 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase CSD PF00313.22 ORF13011 - 3e-12 46.2 0.0 2.3e-11 43.4 0.0 2.0 2 0 0 2 2 2 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF13011 - 0.081 12.6 0.2 0.15 11.7 0.2 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain NAD-GH PF10712.9 ORF1223 - 5.6e-63 213.3 8.2 6.7e-63 213.0 8.2 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Pkinase PF00069.25 ORF112171 - 0.00018 21.0 0.1 0.00018 21.0 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain YihI PF04220.12 ORF112171 - 0.0073 16.0 0.5 0.0073 16.0 0.5 1.9 1 1 1 2 2 2 1 Der GTPase activator (YihI) DUF4680 PF15730.5 ORF112171 - 0.059 13.7 1.1 0.083 13.2 0.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4680) FAM193_C PF15914.5 ORF10910 - 0.17 11.6 3.8 0.21 11.3 1.3 2.2 2 0 0 2 2 2 0 FAM193 family C-terminal Ank_4 PF13637.6 ORF107071 - 1.4e-08 35.1 0.0 3.2e-08 33.9 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF107071 - 1e-07 32.4 0.0 1.7e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF107071 - 3.7e-07 29.9 0.1 0.0021 18.4 0.1 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 ORF107071 - 4.1e-07 30.1 0.3 0.0043 17.4 0.1 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF107071 - 0.03 14.7 0.8 0.13 12.6 0.6 1.9 1 1 1 2 2 2 0 Ankyrin repeats (many copies) PTS_EIIC PF02378.18 ORF10611 - 9.8e-24 83.9 9.8 9.8e-24 83.9 9.8 2.1 1 1 1 2 2 2 1 Phosphotransferase system, EIIC CS PF04969.16 ORF105806 - 0.00077 20.4 0.0 0.002 19.1 0.0 1.8 1 1 0 1 1 1 1 CS domain ESCRT-II PF05871.12 ORF105806 - 0.018 15.3 0.1 0.032 14.5 0.0 1.5 2 0 0 2 2 2 0 ESCRT-II complex subunit Csm1_N PF18504.1 ORF105278 - 0.009 16.3 7.1 0.17 12.3 2.4 2.6 2 1 0 2 2 2 1 Csm1 N-terminal domain SKA2 PF16740.5 ORF105278 - 0.015 15.1 0.8 0.015 15.1 0.8 2.3 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 CENP-F_leu_zip PF10473.9 ORF105278 - 0.016 15.2 1.4 0.016 15.2 1.4 2.3 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YabA PF06156.13 ORF105278 - 0.018 15.7 2.2 0.062 13.9 0.3 2.2 2 0 0 2 2 2 0 Initiation control protein YabA Med30 PF11315.8 ORF105278 - 0.026 14.7 3.6 0.2 11.9 0.3 2.3 2 0 0 2 2 2 0 Mediator complex subunit 30 LXG PF04740.12 ORF105278 - 0.036 13.8 2.5 0.34 10.6 0.4 2.1 2 0 0 2 2 2 0 LXG domain of WXG superfamily SlyX PF04102.12 ORF105278 - 0.051 14.2 8.2 0.051 14.2 2.0 2.5 2 0 0 2 2 2 0 SlyX DUF5082 PF16888.5 ORF105278 - 0.054 13.8 1.2 0.054 13.8 1.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) dCache_2 PF08269.11 ORF105278 - 0.083 12.1 0.3 0.083 12.1 0.3 1.4 2 0 0 2 2 2 0 Cache domain GAS PF13851.6 ORF105278 - 0.086 12.2 7.7 0.079 12.3 1.1 2.2 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF16 PF01519.16 ORF105278 - 0.12 12.9 3.2 0.14 12.7 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF16 TSC22 PF01166.18 ORF105278 - 0.42 11.0 3.1 0.51 10.7 0.5 2.4 2 1 1 3 3 3 0 TSC-22/dip/bun family DUF4407 PF14362.6 ORF105278 - 0.49 9.7 7.9 0.97 8.7 3.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Fmp27_WPPW PF10359.9 ORF105278 - 0.5 9.2 3.7 0.15 10.9 0.4 1.7 2 0 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain FAM76 PF16046.5 ORF105278 - 0.76 9.1 5.6 0.28 10.5 0.1 2.0 2 0 0 2 2 2 0 FAM76 protein DUF1664 PF07889.12 ORF105278 - 0.82 9.7 4.8 3.9 7.5 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 ORF105278 - 0.85 8.4 8.6 0.084 11.7 0.7 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein Seryl_tRNA_N PF02403.22 ORF105278 - 1.4 9.2 6.8 3.4 8.0 0.9 2.4 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DivIC PF04977.15 ORF105278 - 1.5 8.6 8.0 1.2 8.9 1.5 2.4 2 0 0 2 2 2 0 Septum formation initiator CENP-H PF05837.12 ORF105278 - 1.8 9.0 13.6 0.3 11.5 3.7 2.5 2 1 1 3 3 3 0 Centromere protein H (CENP-H) TMF_DNA_bd PF12329.8 ORF105278 - 3 7.9 9.9 0.26 11.3 2.3 2.3 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding ZapB PF06005.12 ORF105278 - 3.4 8.2 12.3 0.29 11.6 3.5 2.6 2 1 1 3 3 3 0 Cell division protein ZapB FlxA PF14282.6 ORF105278 - 4.7 7.3 11.3 0.51 10.4 2.0 3.0 2 1 1 3 3 3 0 FlxA-like protein NAD-GH PF10712.9 ORF104373 - 5.6e-63 213.3 8.2 6.7e-63 213.0 8.2 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Rhodanese PF00581.20 ORF103677 - 3.3e-09 37.2 0.0 6.1e-06 26.7 0.0 2.3 2 0 0 2 2 2 2 Rhodanese-like domain CBP_GIL PF10995.8 ORF101784 - 1.3e-106 357.3 0.0 1.5e-106 357.1 0.0 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis GIL CpcD PF01383.21 NODE_31788_length_685_cov_3.487692_g25211_i0forward_frame_1 - 0.075 13.3 0.1 0.24 11.7 0.1 1.9 1 0 0 1 1 1 0 CpcD/allophycocyanin linker domain DUSP PF06337.12 NODE_31776_length_685_cov_95.316923_g25199_i0forward_frame_1 - 0.23 12.1 2.3 0.47 11.1 2.3 1.6 1 1 0 1 1 1 0 DUSP domain Neur_chan_memb PF02932.16 NODE_31764_length_685_cov_161.307692_g25188_i0forward_frame_1 - 0.093 12.8 5.0 0.14 12.2 5.0 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region SRP-alpha_N PF04086.13 NODE_31764_length_685_cov_161.307692_g25188_i0forward_frame_1 - 2.4 8.0 14.2 3.1 7.6 14.2 1.4 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal AMMECR1 PF01871.17 NODE_31749_length_685_cov_655.183077_g25175_i0forward_frame_1 - 7.2e-43 146.1 0.0 9.1e-43 145.7 0.0 1.1 1 0 0 1 1 1 1 AMMECR1 zf-SCNM1 PF15803.5 NODE_31730_length_686_cov_56.006144_g25163_i0reverse_frame_1 - 0.81 9.4 9.2 0.23 11.1 2.2 2.8 3 0 0 3 3 3 0 Zinc-finger of sodium channel modifier 1 Fcf2 PF08698.11 NODE_31729_length_686_cov_76.228879_g25162_i0reverse_frame_1 - 0.043 14.2 0.1 0.078 13.4 0.1 1.4 1 0 0 1 1 1 0 Fcf2 pre-rRNA processing Plasmid_RAQPRD PF09686.10 NODE_31696_length_686_cov_530.033794_g25129_i0reverse_frame_1 - 0.089 13.0 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 Plasmid protein of unknown function (Plasmid_RAQPRD) TIMP PF00965.17 NODE_31681_length_687_cov_14.444785_g25119_i0reverse_frame_1 - 0.073 12.9 0.3 2.4 7.9 0.1 2.2 1 1 1 2 2 2 0 Tissue inhibitor of metalloproteinase Ldl_recept_a PF00057.18 NODE_31681_length_687_cov_14.444785_g25119_i0reverse_frame_1 - 0.51 10.6 2.0 0.59 10.4 0.6 1.9 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A ScsC_N PF18312.1 NODE_31674_length_687_cov_91.639571_g25112_i0forward_frame_1 - 0.12 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Copper resistance protein ScsC N-terminal domain Branch_AA_trans PF05525.13 NODE_31636_length_688_cov_2.839204_g25082_i0reverse_frame_2 - 5.5e-81 272.6 11.3 6.1e-81 272.5 11.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein AnkUBD PF18418.1 NODE_31636_length_688_cov_2.839204_g25082_i0reverse_frame_2 - 0.064 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Ankyrin ubiquitin-binding domain TPR_1 PF00515.28 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 1.3e-14 53.2 4.3 0.00023 20.8 0.1 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 2.3e-14 52.3 3.4 5.7e-05 22.9 0.0 4.0 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 4.9e-10 38.9 5.2 0.00049 19.7 0.3 3.9 3 1 1 4 4 4 3 TPR repeat TPR_8 PF13181.6 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 2.1e-06 27.5 12.2 0.00021 21.3 0.1 4.5 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 0.0012 19.1 0.8 0.005 17.1 0.1 2.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 0.0046 17.5 0.2 0.089 13.5 0.0 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 0.018 15.7 0.0 1.3 9.7 0.0 2.3 1 1 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 0.02 15.0 0.0 0.11 12.7 0.0 2.1 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 0.023 15.0 0.4 1.4 9.3 0.0 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat Paf67 PF10255.9 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 0.17 10.8 1.2 0.43 9.5 0.1 1.8 2 0 0 2 2 2 0 RNA polymerase I-associated factor PAF67 MIT PF04212.18 NODE_31633_length_688_cov_4.367534_g25079_i0forward_frame_3 - 0.24 11.5 4.2 0.16 12.1 0.5 2.7 2 1 1 3 3 3 0 MIT (microtubule interacting and transport) domain SusD-like_3 PF14322.6 NODE_31630_length_688_cov_7.494640_g25076_i0reverse_frame_3 - 0.072 13.4 0.1 0.1 12.9 0.1 1.4 1 0 0 1 1 1 0 Starch-binding associating with outer membrane MutS_III PF05192.18 NODE_31630_length_688_cov_7.494640_g25076_i0forward_frame_3 - 2.6e-05 24.5 0.1 4e-05 23.9 0.1 1.2 1 0 0 1 1 1 1 MutS domain III WSC PF01822.19 NODE_31628_length_688_cov_53.341501_g25074_i0reverse_frame_2 - 0.00022 21.3 3.6 0.00032 20.8 0.7 2.6 2 1 0 2 2 2 1 WSC domain Presenilin PF01080.17 NODE_31619_length_688_cov_91.852986_g25065_i0reverse_frame_3 - 5.4 5.7 6.5 6.8 5.3 6.5 1.2 1 0 0 1 1 1 0 Presenilin DUF5100 PF17029.5 NODE_31595_length_688_cov_285.767228_g25042_i0forward_frame_2 - 0.044 13.6 0.0 1.9 8.3 0.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF5100) Ras PF00071.22 NODE_31585_length_688_cov_1127.148545_g25033_i0reverse_frame_2 - 1.6e-46 157.9 0.2 2.2e-46 157.4 0.2 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_31585_length_688_cov_1127.148545_g25033_i0reverse_frame_2 - 2.3e-25 89.1 0.0 4.5e-25 88.2 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_31585_length_688_cov_1127.148545_g25033_i0reverse_frame_2 - 6.5e-10 38.7 0.0 8.8e-10 38.3 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 NODE_31585_length_688_cov_1127.148545_g25033_i0reverse_frame_2 - 0.0057 16.0 0.0 0.0095 15.3 0.0 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 NODE_31585_length_688_cov_1127.148545_g25033_i0reverse_frame_2 - 0.029 14.5 0.0 0.048 13.8 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF1638 PF07796.11 NODE_31585_length_688_cov_1127.148545_g25033_i0reverse_frame_2 - 0.12 12.5 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1638) DUF1361 PF07099.11 NODE_31525_length_690_cov_100.998473_g24986_i0forward_frame_2 - 0.038 14.0 0.3 0.066 13.2 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1361) ubiquitin PF00240.23 ORF99866 - 2.4e-98 321.9 15.7 1.1e-32 111.6 0.9 3.0 3 0 0 3 3 3 3 Ubiquitin family Rad60-SLD PF11976.8 ORF99866 - 1.5e-45 152.9 17.8 4.7e-15 55.2 1.4 3.0 3 0 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF99866 - 8.3e-17 61.4 7.2 0.00033 21.0 0.2 4.6 3 3 0 3 3 3 3 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF99866 - 3.9e-12 45.9 3.8 0.012 15.5 0.1 3.2 3 0 0 3 3 3 3 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF99866 - 1.8e-10 40.9 1.8 0.062 13.4 0.0 3.9 3 3 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF99866 - 3.4e-10 40.1 4.6 0.039 14.3 0.1 3.1 3 0 0 3 3 3 3 Ubiquitin-like domain DUF2407 PF10302.9 ORF99866 - 2.7e-09 37.5 0.9 0.13 12.9 0.0 3.2 1 1 1 3 3 3 3 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF99866 - 1.9e-07 31.1 17.3 4.1 7.5 0.2 6.0 6 0 0 6 6 6 3 Ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF99866 - 3.1e-06 27.1 0.2 1.8 8.3 0.0 3.1 1 1 2 3 3 3 3 Silencing defective 2 N-terminal ubiquitin domain DUF2870 PF11069.8 ORF99866 - 0.0002 21.7 0.0 17 5.9 0.0 3.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2870) UDP-g_GGTase PF06427.11 ORF99866 - 0.0028 17.8 3.4 2.8 8.1 0.1 3.2 4 0 0 4 4 3 2 UDP-glucose:Glycoprotein Glucosyltransferase DUF3861 PF12977.7 ORF99866 - 0.0029 17.7 1.2 25 5.1 0.0 3.2 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3861) DUF969 PF06149.12 ORF99866 - 0.0067 15.9 0.0 12 5.2 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF969) Big_3_3 PF13750.6 ORF99866 - 0.01 15.5 0.0 32 4.1 0.0 3.1 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) Big_7 PF17957.1 ORF99866 - 0.012 16.3 0.2 66 4.4 0.0 3.1 3 0 0 3 3 3 0 Bacterial Ig domain Raf1_HTH PF18579.1 ORF99866 - 0.016 14.9 0.1 34 4.2 0.0 3.3 3 0 0 3 3 3 0 Rubisco accumulation factor 1 helix turn helix domain NEAT PF05031.12 ORF99866 - 0.037 14.6 2.3 2.5 8.8 2.3 2.6 1 1 0 1 1 1 0 Iron Transport-associated domain MPS2 PF17060.5 ORF99866 - 0.038 13.3 2.8 18 4.5 0.1 3.0 1 1 0 3 3 3 0 Monopolar spindle protein 2 ORF11CD3 PF10549.9 ORF99866 - 0.059 13.5 0.0 62 3.8 0.0 3.7 3 0 0 3 3 3 0 ORF11CD3 domain TmoB PF06234.12 ORF99866 - 0.076 13.1 6.1 27 4.9 0.1 3.7 3 3 0 3 3 3 0 Toluene-4-monooxygenase system protein B (TmoB) Myosin_N PF02736.19 ORF99866 - 0.12 12.2 4.3 43 4.0 0.1 4.4 3 0 0 3 3 3 0 Myosin N-terminal SH3-like domain FlgD_ig PF13860.6 ORF99866 - 0.16 11.9 5.4 40 4.2 0.1 3.4 3 0 0 3 3 3 0 FlgD Ig-like domain ProRS-C_2 PF09181.10 ORF99866 - 0.18 11.9 2.4 87 3.4 0.1 3.1 3 0 0 3 3 3 0 Prolyl-tRNA synthetase, C-terminal Phage-tail_1 PF09097.10 ORF99866 - 0.21 11.4 0.7 70 3.1 0.0 2.9 3 0 0 3 3 3 0 Baseplate structural protein, domain 1 DMA PF03474.14 ORF99866 - 0.46 10.1 1.7 1.1e+02 2.5 0.0 3.2 3 0 0 3 3 3 0 DMRTA motif UL11 PF11094.8 ORF99866 - 0.96 9.4 3.6 1e+02 2.9 0.1 3.1 3 0 0 3 3 3 0 Membrane-associated tegument protein DUF1143 PF06608.11 ORF9941 - 0.021 14.9 0.4 0.038 14.0 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) Lectin_C_term PF18022.1 ORF9941 - 0.37 11.3 5.1 0.28 11.7 2.9 1.9 2 0 0 2 2 2 0 Ricin-type beta-trefoil lectin C-terminal domain Coprogen_oxidas PF01218.18 ORF99088 - 3.8e-72 242.5 1.0 4.2e-72 242.4 1.0 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase Excalibur PF05901.11 ORF99088 - 0.0097 16.5 0.0 0.027 15.1 0.0 1.8 1 0 0 1 1 1 1 Excalibur calcium-binding domain Sulfotransfer_2 PF03567.14 ORF98552 - 0.00044 20.2 0.0 0.00098 19.1 0.0 1.6 1 1 0 1 1 1 1 Sulfotransferase family Ependymin PF00811.18 ORF97743 - 0.017 15.4 0.1 0.031 14.5 0.1 1.6 1 0 0 1 1 1 0 Ependymin NCBP3 PF10309.9 ORF97743 - 0.12 12.2 1.3 2.2 8.2 0.1 2.4 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 DUF3150 PF11348.8 ORF97743 - 0.17 11.1 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) Hint PF01079.20 ORF95168 - 0.016 14.7 0.0 0.032 13.7 0.0 1.5 1 1 0 1 1 1 0 Hint module Intein_splicing PF14890.6 ORF95168 - 0.099 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Intein splicing domain Pkinase PF00069.25 ORF91743 - 2.4e-30 105.8 0.1 2.6e-30 105.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF91743 - 4.6e-20 72.0 0.0 4.9e-20 71.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF91743 - 9e-08 31.3 0.0 1.1e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF91743 - 8.1e-06 25.9 0.1 0.0011 18.9 0.0 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF91743 - 0.0024 16.9 0.1 0.0034 16.4 0.1 1.2 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Kinase-like PF14531.6 ORF91743 - 0.0048 16.3 0.1 0.13 11.6 0.0 2.1 2 0 0 2 2 2 1 Kinase-like Choline_kinase PF01633.20 ORF91743 - 0.051 13.1 0.1 0.095 12.3 0.1 1.4 1 0 0 1 1 1 0 Choline/ethanolamine kinase adh_short PF00106.25 ORF91679 - 8.5e-14 51.5 0.0 1.1e-12 47.8 0.0 2.1 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF91679 - 7.9e-07 28.9 0.0 5.5e-06 26.1 0.0 1.9 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase TPT PF03151.16 ORF91557 - 5e-46 157.4 12.6 5.7e-46 157.2 12.6 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF91557 - 4.4e-07 30.1 21.8 0.00054 20.1 3.7 2.1 2 0 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 ORF91557 - 0.15 11.3 12.8 4.4 6.4 12.8 2.2 1 1 0 1 1 1 0 Purine nucleobase transmembrane transport CoA_binding_3 PF13727.6 ORF91557 - 0.4 10.7 10.2 0.76 9.8 3.2 2.2 2 0 0 2 2 2 0 CoA-binding domain CRT-like PF08627.10 ORF91557 - 0.58 9.1 9.5 0.12 11.3 2.6 2.1 1 1 1 2 2 2 0 CRT-like, chloroquine-resistance transporter-like Nuc_sug_transp PF04142.15 ORF91557 - 1.3 8.2 9.4 6.4 5.8 9.4 1.9 1 1 0 1 1 1 0 Nucleotide-sugar transporter 14-3-3 PF00244.20 ORF89734 - 3.8e-89 298.0 4.6 4.5e-89 297.8 4.6 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF89734 - 0.016 15.2 0.2 0.041 13.9 0.2 1.7 1 0 0 1 1 1 0 Flagellar protein FlaF Chloroa_b-bind PF00504.21 ORF89059 - 1.6e-28 100.3 0.1 1.6e-28 100.3 0.1 1.5 2 0 0 2 2 2 1 Chlorophyll A-B binding protein SH3_9 PF14604.6 ORF88726 - 9e-05 22.3 0.0 0.00016 21.5 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF88726 - 0.0069 16.0 0.0 0.01 15.4 0.0 1.3 1 0 0 1 1 1 1 SH3 domain Tom5 PF10642.9 ORF88726 - 0.16 12.0 1.7 0.54 10.3 1.4 2.0 2 0 0 2 2 2 0 Mitochondrial import receptor subunit or translocase MutH PF02976.15 ORF87436 - 6.8e-34 116.0 0.0 9.9e-34 115.5 0.0 1.2 1 0 0 1 1 1 1 DNA mismatch repair enzyme MutH SpoU_methylase PF00588.19 ORF80992 - 8.8e-37 126.4 0.1 1.2e-36 126.0 0.1 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_methylas_C PF12105.8 ORF80992 - 7.9e-25 86.3 0.9 1.6e-24 85.3 0.9 1.5 1 0 0 1 1 1 1 SpoU, rRNA methylase, C-terminal zf-RING_2 PF13639.6 ORF78912 - 4.6e-10 39.7 7.7 8.6e-10 38.8 7.7 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF78912 - 6.3e-09 35.4 6.6 1.3e-08 34.4 6.6 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF78912 - 1.8e-07 30.9 7.4 3.7e-07 29.9 7.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF78912 - 1.5e-05 24.8 7.7 1.5e-05 24.8 7.7 1.7 2 0 0 2 2 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF78912 - 3.6e-05 23.7 3.9 3.6e-05 23.7 3.9 1.7 2 0 0 2 2 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF78912 - 4.4e-05 23.2 6.1 9e-05 22.2 6.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF78912 - 0.0004 20.6 7.3 0.0004 20.6 7.3 2.1 2 1 0 2 2 1 1 RING-H2 zinc finger domain Rax2 PF12768.7 ORF78912 - 0.00048 19.6 0.1 0.00066 19.2 0.1 1.2 1 0 0 1 1 1 1 Cortical protein marker for cell polarity MAP17 PF15807.5 ORF78912 - 0.0006 20.0 0.0 0.00097 19.4 0.0 1.4 1 0 0 1 1 1 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 zf-ANAPC11 PF12861.7 ORF78912 - 0.00062 19.8 1.6 0.0011 19.0 1.6 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger AMA-1 PF02430.15 ORF78912 - 0.0011 18.0 0.3 0.0017 17.4 0.3 1.2 1 0 0 1 1 1 1 Apical membrane antigen 1 Mucin15 PF15672.5 ORF78912 - 0.0012 18.4 2.1 0.0058 16.2 2.1 1.9 1 1 0 1 1 1 1 Cell-membrane associated Mucin15 Protocadherin PF08374.11 ORF78912 - 0.0019 18.2 0.1 0.0026 17.8 0.1 1.3 1 0 0 1 1 1 1 Protocadherin zf-C3HC4_4 PF15227.6 ORF78912 - 0.0023 18.0 2.3 0.0065 16.6 2.3 1.8 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF78912 - 0.0031 17.3 7.2 0.0031 17.3 7.2 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Shisa PF13908.6 ORF78912 - 0.0032 17.7 0.7 0.0032 17.7 0.7 1.8 1 1 1 2 2 2 1 Wnt and FGF inhibitory regulator PHD PF00628.29 ORF78912 - 0.0034 17.2 5.1 0.0034 17.2 5.1 1.9 2 0 0 2 2 2 1 PHD-finger EphA2_TM PF14575.6 ORF78912 - 0.004 18.0 0.1 0.0091 16.9 0.1 1.5 1 0 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain zf-Nse PF11789.8 ORF78912 - 0.0076 16.0 4.6 0.015 15.1 4.6 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit LRR19-TM PF15176.6 ORF78912 - 0.011 15.7 0.0 0.019 14.9 0.0 1.5 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain DUF5305 PF17231.2 ORF78912 - 0.018 14.4 0.3 0.029 13.8 0.3 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5305) LAX PF15681.5 ORF78912 - 0.022 13.6 0.0 0.037 12.8 0.0 1.4 1 0 0 1 1 1 0 Lymphocyte activation family X TMEM132D_C PF15706.5 ORF78912 - 0.023 14.5 0.3 0.12 12.2 0.0 2.2 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF2207 PF09972.9 ORF78912 - 0.033 13.0 0.0 0.04 12.7 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-RING_6 PF14835.6 ORF78912 - 0.16 11.9 3.0 0.35 10.8 3.0 1.6 1 1 0 1 1 1 0 zf-RING of BARD1-type protein FANCL_C PF11793.8 ORF78912 - 0.17 12.1 5.8 0.49 10.6 5.8 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF78912 - 1 9.3 11.0 0.23 11.4 7.1 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF78912 - 1.4 8.6 12.9 0.11 12.1 7.6 2.0 2 1 0 2 2 1 0 Zinc-ribbon, C4HC2 type zf-MIZ PF02891.20 ORF78912 - 2.1 8.1 7.9 0.11 12.3 2.6 1.6 2 0 0 2 2 1 0 MIZ/SP-RING zinc finger SHIPPO-rpt PF07004.12 ORF78282 - 1.6e-14 54.0 30.3 1.9e-05 25.4 2.7 5.7 5 0 0 5 5 5 5 Sperm-tail PG-rich repeat RskA PF10099.9 ORF77134 - 0.17 12.2 0.6 0.24 11.6 0.6 1.2 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF4757 PF15949.5 ORF70409 - 0.36 11.3 7.3 0.1 13.1 2.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4757) PhyH PF05721.13 ORF69675 - 6.8e-22 78.8 0.2 8.7e-22 78.4 0.2 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) 2OG-FeII_Oxy_3 PF13640.6 ORF69675 - 6.5e-08 33.4 0.1 1.8e-07 32.0 0.1 1.7 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 ORF69675 - 0.0039 17.6 0.0 0.006 17.0 0.0 1.3 1 0 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase Fer2_2 PF01799.20 ORF68928 - 8.8e-31 105.8 1.1 3.8e-30 103.7 0.2 2.1 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 ORF68928 - 2.3e-11 43.5 1.0 2.3e-11 43.5 1.0 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 ORF68928 - 6.4e-06 26.1 0.1 1.3e-05 25.1 0.1 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain TAT_signal PF10518.9 ORF68928 - 0.00019 21.2 0.1 0.00019 21.2 0.1 2.0 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence Fer2_4 PF13510.6 ORF68928 - 0.0079 16.2 0.9 0.035 14.1 0.9 2.1 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain HisKA PF00512.25 ORF6878 - 0.00011 22.1 1.4 0.00024 21.1 0.1 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain rRNA_proc-arch PF13234.6 ORF67363 - 0.0024 17.9 1.6 0.0033 17.4 1.6 1.2 1 0 0 1 1 1 1 rRNA-processing arch domain T4_Gp59_N PF08993.10 ORF67363 - 0.23 11.9 3.7 0.36 11.3 2.3 2.0 2 0 0 2 2 2 0 T4 gene Gp59 loader of gp41 DNA helicase RNA_binding PF01877.17 ORF67363 - 1.9 8.8 7.3 2.5 8.4 3.4 2.5 1 1 2 3 3 3 0 RNA binding # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks81.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks81.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks81.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks81.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:19:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CBS PF00571.28 ORF66750 - 0.001 19.5 0.3 0.03 14.8 0.0 2.6 2 1 1 3 3 3 1 CBS domain Voltage_CLC PF00654.20 ORF66750 - 0.068 12.4 4.6 0.086 12.1 4.6 1.1 1 0 0 1 1 1 0 Voltage gated chloride channel Ndc1_Nup PF09531.10 ORF65556 - 2.6 6.6 3.9 2.7 6.6 3.9 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Sugar_tr PF00083.24 ORF65210 - 0.00013 21.0 5.8 0.0004 19.4 2.4 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF65210 - 0.00031 19.8 13.2 0.00073 18.6 13.1 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Peptidase_M50B PF13398.6 ORF65210 - 0.58 9.8 6.6 0.07 12.7 2.5 1.5 2 0 0 2 2 2 0 Peptidase M50B-like Sel1 PF08238.12 ORF64065 - 7.3e-16 58.3 22.1 2.3e-05 24.9 0.2 6.5 6 2 0 6 6 6 3 Sel1 repeat ANAPC3 PF12895.7 ORF64065 - 7.1e-05 23.0 2.0 0.0025 18.0 0.2 2.8 3 0 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF64065 - 8.3e-05 23.2 7.4 0.017 15.8 3.3 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF64065 - 0.018 15.0 0.2 55 4.1 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF64065 - 0.024 15.1 8.5 3.8 8.1 1.3 3.8 2 2 1 3 3 3 0 Tetratricopeptide repeat DUF5619 PF18505.1 ORF64065 - 0.17 11.9 1.3 0.82 9.7 0.0 2.5 1 1 2 3 3 3 0 Domain of unknown function (DUF5619) TPR_2 PF07719.17 ORF64065 - 3.4 8.0 8.7 0.58 10.4 0.2 3.9 5 0 0 5 5 5 0 Tetratricopeptide repeat Presenilin PF01080.17 ORF63243 - 0.23 10.2 5.5 0.28 9.9 5.5 1.1 1 0 0 1 1 1 0 Presenilin GnsAB_toxin PF08178.11 ORF63243 - 0.24 11.4 0.2 0.24 11.4 0.2 2.4 2 0 0 2 2 2 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system Ndc1_Nup PF09531.10 ORF63243 - 1.4 7.5 2.9 1.4 7.5 2.9 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF913 PF06025.12 ORF63243 - 8 5.3 8.7 11 4.9 8.7 1.3 1 1 0 1 1 1 0 Domain of Unknown Function (DUF913) Ependymin PF00811.18 ORF60834 - 0.017 15.4 0.1 0.031 14.5 0.1 1.6 1 0 0 1 1 1 0 Ependymin NCBP3 PF10309.9 ORF60834 - 0.12 12.2 1.3 2.2 8.2 0.1 2.4 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 DUF3150 PF11348.8 ORF60834 - 0.17 11.1 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) FAD_binding_3 PF01494.19 ORF57901 - 4.8e-08 32.6 0.0 5.8e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF57901 - 0.013 14.6 0.0 0.02 13.9 0.0 1.2 1 0 0 1 1 1 0 Squalene epoxidase Flagellin_N PF00669.20 ORF57901 - 0.16 12.1 0.2 1.6 8.9 0.0 2.1 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region Aminotran_5 PF00266.19 ORF56493 - 1.1e-44 152.9 0.0 1.2e-44 152.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V FAD_binding_3 PF01494.19 ORF55066 - 4.2e-06 26.2 0.0 4.7e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain SecD_SecF PF02355.16 ORF52146 - 5.6e-70 234.6 10.7 6.7e-70 234.3 10.7 1.0 1 0 0 1 1 1 1 Protein export membrane protein ACR_tran PF00873.19 ORF52146 - 0.0013 16.5 8.5 0.0016 16.2 8.5 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family PIG-F PF06699.11 ORF52146 - 0.029 14.5 2.8 0.046 13.9 2.5 1.5 1 1 0 1 1 1 0 GPI biosynthesis protein family Pig-F Sterol-sensing PF12349.8 ORF52146 - 0.14 12.0 5.2 0.14 12.0 4.2 1.5 1 1 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation DUF4514 PF14986.6 ORF52146 - 0.25 11.3 0.0 0.25 11.3 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4514) Polysacc_synt_C PF14667.6 ORF52146 - 2 8.4 15.3 0.47 10.5 2.0 2.2 2 0 0 2 2 2 0 Polysaccharide biosynthesis C-terminal domain PRA1 PF03208.19 ORF52146 - 2.3 7.8 8.4 0.42 10.2 1.0 2.3 1 1 1 2 2 2 0 PRA1 family protein bZIP_1 PF00170.21 ORF51772 - 1.1e-08 35.0 16.4 1.1e-08 35.0 16.4 2.7 2 1 1 3 3 3 2 bZIP transcription factor bZIP_2 PF07716.15 ORF51772 - 2e-05 24.6 19.8 8.1e-05 22.6 11.1 2.4 2 0 0 2 2 2 2 Basic region leucine zipper DUF2959 PF11172.8 ORF51772 - 0.00052 20.2 6.5 0.00052 20.2 6.5 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2959) bZIP_Maf PF03131.17 ORF51772 - 0.0029 18.1 11.0 0.0029 18.1 11.0 2.7 1 1 2 3 3 3 1 bZIP Maf transcription factor PRKG1_interact PF15898.5 ORF51772 - 0.33 11.9 20.5 0.4 11.6 0.3 2.2 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain V_ATPase_I PF01496.19 ORF51772 - 0.82 7.5 12.6 1.1 7.1 12.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 ORF51772 - 3 7.9 9.4 5.4 7.1 9.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF51772 - 4 7.5 21.4 6.5 6.8 21.4 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 ORF51772 - 4.1 5.9 15.7 5.9 5.4 15.7 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A HEPN_AbiA_CTD PF18732.1 ORF46177 - 0.02 14.8 3.0 0.035 14.0 3.0 1.5 1 0 0 1 1 1 0 HEPN like, Abia C-terminal domain DDE_Tnp_ISL3 PF01610.17 ORF44977 - 0.046 13.4 0.1 0.12 12.1 0.0 1.7 1 1 1 2 2 2 0 Transposase OSCP PF00213.18 ORF43454 - 9.3e-44 149.6 1.3 1.1e-43 149.3 1.3 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit Aspzincin_M35 PF14521.6 ORF42387 - 0.11 13.1 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Lysine-specific metallo-endopeptidase DnaJ PF00226.31 ORF42191 - 2.1e-21 75.8 0.0 4e-21 74.9 0.0 1.5 1 0 0 1 1 1 1 DnaJ domain TPR_1 PF00515.28 ORF42191 - 2.1e-09 36.8 0.8 2.7e-06 27.0 0.0 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF42191 - 2.5e-08 33.4 5.0 0.00018 21.3 0.0 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF42191 - 2.7e-05 24.2 0.3 2.7e-05 24.2 0.3 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF42191 - 0.00017 21.5 0.8 0.0012 18.9 0.0 2.8 4 0 0 4 4 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF42191 - 0.0015 18.8 7.7 1.4 9.2 0.0 3.7 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF42191 - 0.0094 16.6 5.4 0.3 11.8 2.7 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF42191 - 0.064 13.0 0.2 4.9 6.9 0.0 3.1 2 1 1 3 3 3 0 TPR repeat TPR_7 PF13176.6 ORF42191 - 0.077 13.1 0.4 5 7.4 0.0 3.1 3 1 1 4 4 4 0 Tetratricopeptide repeat ssDNA_DBD PF18333.1 ORF42191 - 0.088 12.9 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Non-canonical single-stranded DNA-binding domain DUF3856 PF12968.7 ORF42191 - 0.11 12.5 3.2 0.13 12.3 1.3 2.0 2 1 1 3 3 3 0 Domain of Unknown Function (DUF3856) TPR_19 PF14559.6 ORF42191 - 0.14 12.7 7.3 3.6 8.2 3.4 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF42191 - 0.54 11.2 10.8 6.3 7.9 0.0 3.6 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF42191 - 3 8.7 7.5 11 6.9 0.0 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat MTHFR PF02219.17 ORF40992 - 9.3e-87 291.0 0.0 1.1e-86 290.7 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase DUF1987 PF09345.10 ORF40992 - 0.0011 18.7 0.5 0.0017 18.0 0.5 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1987) Beta_protein PF14350.6 ORF40992 - 0.024 14.0 0.0 0.029 13.8 0.0 1.2 1 0 0 1 1 1 0 Beta protein UDG PF03167.19 ORF40538 - 1.7e-28 99.6 0.0 2.3e-28 99.1 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Pkinase PF00069.25 ORF37796 - 2.8e-41 141.6 1.0 5.8e-41 140.6 1.0 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF37796 - 2.1e-24 86.2 0.1 2.9e-24 85.8 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Sel1 PF08238.12 ORF35340 - 7.3e-16 58.3 22.1 2.3e-05 24.9 0.2 6.5 6 2 0 6 6 6 3 Sel1 repeat ANAPC3 PF12895.7 ORF35340 - 7.1e-05 23.0 2.0 0.0025 18.0 0.2 2.8 3 0 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF35340 - 8.3e-05 23.2 7.4 0.017 15.8 3.3 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF35340 - 0.018 15.0 0.2 55 4.1 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF35340 - 0.024 15.1 8.5 3.8 8.1 1.3 3.8 2 2 1 3 3 3 0 Tetratricopeptide repeat DUF5619 PF18505.1 ORF35340 - 0.17 11.9 1.3 0.82 9.7 0.0 2.5 1 1 2 3 3 3 0 Domain of unknown function (DUF5619) TPR_2 PF07719.17 ORF35340 - 3.4 8.0 8.7 0.58 10.4 0.2 3.9 5 0 0 5 5 5 0 Tetratricopeptide repeat Glycos_transf_1 PF00534.20 ORF34929 - 3e-39 134.3 0.0 4e-39 133.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF34929 - 2.8e-26 92.5 0.0 3.8e-26 92.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF34929 - 7.8e-05 23.0 0.0 0.00013 22.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 ORF34929 - 0.00079 19.5 0.0 0.43 10.5 0.0 2.4 2 0 0 2 2 2 2 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 ORF34929 - 0.0031 18.0 0.1 0.31 11.5 0.0 2.8 2 1 0 3 3 3 1 Glycosyl transferase 4-like domain DUF615 PF04751.14 ORF34929 - 0.072 13.1 0.6 1.8 8.5 0.2 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF615) GUCT PF08152.12 ORF33550 - 1.9e-15 56.9 0.0 3e-15 56.3 0.0 1.3 1 0 0 1 1 1 1 GUCT (NUC152) domain DUF1805 PF08827.11 ORF33550 - 0.073 13.4 0.1 0.26 11.7 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) CTP-dep_RFKase PF01982.16 ORF32970 - 0.0022 18.1 0.0 0.0047 17.0 0.0 1.5 2 0 0 2 2 2 1 Domain of unknown function DUF120 Aminotran_1_2 PF00155.21 ORF32517 - 9.6e-31 107.2 0.0 1.1e-30 107.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PTPLA PF04387.14 ORF30319 - 9.7e-07 28.7 10.6 9.7e-07 28.7 10.6 1.8 2 0 0 2 2 2 1 Protein tyrosine phosphatase-like protein, PTPLA Bax1-I PF01027.20 ORF25623 - 4e-29 101.9 23.7 4.8e-29 101.7 23.7 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 SLATT_3 PF18184.1 ORF25623 - 4.7 7.3 5.6 2.2 8.4 0.3 2.1 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 3 Cortex-I_coil PF09304.10 ORF24344 - 0.0095 16.1 4.1 0.14 12.4 0.5 2.2 2 0 0 2 2 2 2 Cortexillin I, coiled coil DUF3251 PF11622.8 ORF24344 - 0.23 11.1 1.9 0.37 10.4 0.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3251) DUF3847 PF12958.7 ORF24344 - 0.5 10.5 5.3 0.94 9.6 2.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3847) Uso1_p115_C PF04871.13 ORF24344 - 0.55 10.6 6.7 0.18 12.2 0.8 2.3 2 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Csm1_N PF18504.1 ORF24344 - 0.75 10.2 7.9 2.9 8.3 2.4 2.4 2 0 0 2 2 2 0 Csm1 N-terminal domain ADIP PF11559.8 ORF24344 - 1.1 9.3 11.9 0.91 9.6 4.7 2.3 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Aldo_ket_red PF00248.21 ORF23492 - 7e-36 123.9 0.0 8e-36 123.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF1298 PF06974.13 ORF20242 - 0.012 15.5 0.1 0.021 14.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1298) Ank_2 PF12796.7 ORF19467 - 2.6e-23 82.4 2.6 6.1e-15 55.6 0.5 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF19467 - 2.3e-13 50.3 0.0 3.1e-06 27.6 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF19467 - 2.7e-11 42.6 0.0 0.002 18.5 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF19467 - 7.3e-11 42.0 0.2 0.00046 20.5 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF19467 - 3.4e-10 40.0 0.6 0.00031 21.0 0.1 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) DUF2170 PF09938.9 ORF19467 - 0.1 12.3 0.0 12 5.6 0.0 2.5 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2170) AP2 PF00847.20 ORF18708 - 0.17 12.2 0.5 0.17 12.2 0.5 2.0 2 0 0 2 2 2 0 AP2 domain DUF2384 PF09722.10 ORF18325 - 0.099 12.7 0.1 0.2 11.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2384) MWFE PF15879.5 ORF14088 - 0.18 12.0 1.6 2.8 8.2 1.7 2.8 2 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase MWFE subunit DUF4064 PF13273.6 ORF14088 - 1.9 8.8 10.7 2.7e+02 1.9 10.4 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) LRR_4 PF12799.7 ORF14019 - 1.2e-06 28.7 4.7 0.0063 16.9 0.1 3.4 2 1 1 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF14019 - 8.9e-05 22.2 2.6 8.9e-05 22.2 2.6 2.7 2 1 0 2 2 2 1 Leucine rich repeat LRR_1 PF00560.33 ORF14019 - 0.0015 18.8 4.1 1.2 9.9 0.2 4.3 4 0 0 4 4 4 1 Leucine Rich Repeat LRR_6 PF13516.6 ORF14019 - 0.18 11.9 0.4 3.6 7.9 0.0 2.8 2 0 0 2 2 2 0 Leucine Rich repeat ATP-synt_E PF05680.12 ORF14019 - 0.62 10.4 4.4 1.2 9.5 4.4 1.5 1 0 0 1 1 1 0 ATP synthase E chain Peptidase_S51 PF03575.17 ORF12703 - 3.7e-62 209.6 0.0 4.2e-62 209.5 0.0 1.0 1 0 0 1 1 1 1 Peptidase family S51 BPL_N PF09825.9 ORF12703 - 0.017 14.3 0.0 0.026 13.6 0.0 1.2 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal nos_propeller_2 PF18793.1 ORF12703 - 0.11 12.9 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Nitrous oxide reductase propeller repeat 2 RRM_1 PF00076.22 ORF11364 - 2.6e-07 30.4 0.0 6.3e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Response_reg PF00072.24 ORF112538 - 3e-26 91.8 0.0 4.7e-26 91.2 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 ORF112538 - 1.8e-23 82.4 0.0 3.3e-23 81.5 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal HTH_11 PF08279.12 ORF112538 - 0.023 14.6 0.0 0.41 10.6 0.0 2.7 3 0 0 3 3 3 0 HTH domain Aspzincin_M35 PF14521.6 ORF109075 - 0.11 13.1 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Lysine-specific metallo-endopeptidase p450 PF00067.22 ORF107644 - 5.1e-37 127.7 0.1 2.4e-30 105.7 0.0 2.0 2 0 0 2 2 2 2 Cytochrome P450 LRR_8 PF13855.6 ORF10705 - 6e-08 32.3 2.5 6.9e-06 25.7 0.1 2.6 3 0 0 3 3 3 2 Leucine rich repeat LRR_4 PF12799.7 ORF10705 - 0.0037 17.7 6.0 2.2 8.9 0.2 3.2 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF10705 - 0.015 15.7 2.3 8.3 7.4 0.3 4.4 4 1 0 4 4 4 0 Leucine Rich Repeat FCD PF07729.12 ORF105754 - 2.6e-25 89.2 9.5 4e-25 88.6 9.5 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 ORF105754 - 2.1e-14 52.9 0.1 5.2e-14 51.7 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family DUF2673 PF10880.8 ORF105754 - 0.015 15.4 0.5 0.23 11.6 0.4 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2673) TFIIE_alpha PF02002.17 ORF105754 - 0.05 13.5 0.0 0.16 11.9 0.0 1.8 1 1 0 1 1 1 0 TFIIE alpha subunit BTB PF00651.31 ORF103942 - 1.5e-23 83.1 2.7 1.4e-22 80.0 0.2 2.4 1 1 1 2 2 2 1 BTB/POZ domain DIT1_PvcA PF05141.12 ORF103942 - 0.042 13.3 0.0 0.062 12.7 0.0 1.4 1 1 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein BACK PF07707.15 ORF103942 - 0.09 12.9 1.2 0.31 11.1 0.1 2.4 2 1 0 3 3 3 0 BTB And C-terminal Kelch NMT PF01233.19 ORF103942 - 0.1 12.5 0.1 2 8.3 0.0 2.1 2 0 0 2 2 2 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Coprogen_oxidas PF01218.18 ORF103932 - 3.8e-72 242.5 1.0 4.2e-72 242.4 1.0 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase Excalibur PF05901.11 ORF103932 - 0.0097 16.5 0.0 0.027 15.1 0.0 1.8 1 0 0 1 1 1 1 Excalibur calcium-binding domain DUF4757 PF15949.5 ORF102721 - 0.36 11.3 7.3 0.1 13.1 2.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4757) DUF2779 PF11074.8 ORF102567 - 0.073 13.5 0.1 0.1 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function(DUF2779) DUF3573 PF12097.8 ORF102567 - 0.12 11.1 0.2 0.16 10.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) MSSP PF03940.13 ORF102567 - 4.5 7.0 16.5 22 4.8 16.5 1.9 1 1 0 1 1 1 0 Male specific sperm protein AP3D1 PF06375.11 ORF102567 - 5.9 7.1 15.0 9.9 6.4 15.0 1.4 1 1 0 1 1 1 0 AP-3 complex subunit delta-1 Lectin_C_term PF18022.1 ORF102031 - 0.46 11.0 5.6 0.28 11.7 2.9 1.9 2 0 0 2 2 2 0 Ricin-type beta-trefoil lectin C-terminal domain Peptidase_M24 PF00557.24 ORF101793 - 2.9e-36 125.1 0.3 3.1e-35 121.8 0.3 2.0 1 1 0 1 1 1 1 Metallopeptidase family M24 G6PD_N PF00479.22 NODE_31943_length_682_cov_2.239567_g25335_i0forward_frame_1 - 4e-33 115.5 0.0 6.8e-33 114.8 0.0 1.4 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain GYF_2 PF14237.6 NODE_31943_length_682_cov_2.239567_g25335_i0forward_frame_1 - 0.14 12.0 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 GYF domain 2 Xan_ur_permease PF00860.20 NODE_31940_length_682_cov_3.285935_g25332_i0reverse_frame_1 - 6.3e-50 170.0 22.6 7e-50 169.8 22.6 1.0 1 0 0 1 1 1 1 Permease family DUF1414 PF07208.11 NODE_31939_length_682_cov_3.690881_g25331_i0forward_frame_1 - 0.13 12.2 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1414) CSD PF00313.22 NODE_31911_length_682_cov_369.615147_g25305_i0forward_frame_1 - 4.9e-06 26.3 0.1 9.8e-06 25.3 0.1 1.6 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 NODE_31911_length_682_cov_369.615147_g25305_i0forward_frame_1 - 0.00023 20.8 0.1 0.0006 19.4 0.1 1.7 1 0 0 1 1 1 1 Ribonuclease B OB domain ESP PF16590.5 NODE_31896_length_682_cov_4070.361669_g19647_i2forward_frame_1 - 0.047 14.0 0.1 0.069 13.4 0.1 1.3 1 0 0 1 1 1 0 Exocrine gland-secreting peptide FNIP PF05725.12 NODE_31881_length_683_cov_76.945988_g25282_i0forward_frame_1 - 0.0031 17.6 0.0 0.015 15.4 0.0 2.4 1 1 1 2 2 2 1 FNIP Repeat RMF PF04957.12 NODE_31833_length_684_cov_2.768875_g25246_i0reverse_frame_1 - 1.1e-28 99.2 5.3 1.7e-28 98.6 5.3 1.3 1 0 0 1 1 1 1 Ribosome modulation factor ABC_trans_aux PF03886.13 NODE_31833_length_684_cov_2.768875_g25246_i0reverse_frame_1 - 5e-12 45.7 0.1 7.8e-12 45.1 0.1 1.3 1 0 0 1 1 1 1 ABC-type transport auxiliary lipoprotein component NDK PF00334.19 NODE_31825_length_684_cov_61.251156_g25238_i0forward_frame_1 - 3.9e-05 23.7 0.0 5.8e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Nucleoside diphosphate kinase DUF3493 PF11998.8 NODE_31825_length_684_cov_61.251156_g25238_i0forward_frame_1 - 0.064 13.4 0.1 6 7.1 0.0 3.0 3 0 0 3 3 3 0 Low psii accumulation1 / Rep27 RCC1_2 PF13540.6 NODE_31813_length_684_cov_167.375963_g25227_i0reverse_frame_1 - 1.7e-09 37.2 5.5 0.12 12.2 0.1 4.2 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat Med3 PF11593.8 NODE_31813_length_684_cov_167.375963_g25227_i0reverse_frame_1 - 0.18 11.0 12.0 0.29 10.3 12.0 1.5 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal NACHT PF05729.12 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 9.8e-16 58.1 0.1 1.4e-15 57.6 0.1 1.2 1 0 0 1 1 1 1 NACHT domain AAA_16 PF13191.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 2.6e-07 31.2 1.8 0.00069 20.0 0.1 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 1.9e-05 25.0 0.1 0.00012 22.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.00019 21.8 0.0 0.00031 21.2 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Roc PF08477.13 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.00042 20.5 0.0 0.00072 19.8 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA_25 PF13481.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.0014 18.2 0.0 0.17 11.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.0049 16.6 0.7 0.0073 16.0 0.1 1.6 2 0 0 2 2 2 1 Sigma-54 interaction domain NB-ARC PF00931.22 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.0064 15.7 0.1 0.017 14.3 0.1 1.6 2 0 0 2 2 2 1 NB-ARC domain AAA_7 PF12775.7 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.0098 15.4 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_24 PF13479.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.059 13.1 0.0 0.08 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.059 13.5 0.1 0.11 12.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.062 12.6 0.0 0.16 11.3 0.0 1.6 2 0 0 2 2 2 0 KaiC FtsK_SpoIIIE PF01580.18 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.062 12.6 0.0 0.89 8.9 0.0 2.1 1 1 0 2 2 2 0 FtsK/SpoIIIE family TIR_2 PF13676.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.085 13.5 0.0 18 6.0 0.0 2.2 2 0 0 2 2 2 0 TIR domain ATPase_2 PF01637.18 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.086 12.7 0.0 3.2 7.6 0.0 2.1 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TsaE PF02367.17 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.17 11.9 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMMECR1 PF01871.17 NODE_31804_length_684_cov_420.776579_g25220_i0forward_frame_1 - 2.7e-20 72.6 0.0 3.6e-20 72.3 0.0 1.2 1 0 0 1 1 1 1 AMMECR1 DUF4849 PF16141.5 NODE_31792_length_685_cov_2.543077_g25215_i0reverse_frame_2 - 0.24 10.6 0.0 0.37 10.0 0.0 1.2 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 PPR PF01535.20 NODE_31749_length_685_cov_655.183077_g25175_i0reverse_frame_3 - 0.039 14.2 0.4 0.13 12.6 0.3 2.0 2 0 0 2 2 2 0 PPR repeat PPR_1 PF12854.7 NODE_31749_length_685_cov_655.183077_g25175_i0reverse_frame_3 - 0.051 13.3 0.1 0.09 12.5 0.1 1.4 1 0 0 1 1 1 0 PPR repeat Fe-S_assembly PF04384.13 NODE_31749_length_685_cov_655.183077_g25175_i0forward_frame_2 - 0.14 12.8 0.0 0.26 11.9 0.0 1.5 1 0 0 1 1 1 0 Iron-sulphur cluster assembly FAD_binding_2 PF00890.24 NODE_31735_length_686_cov_3.107527_g25168_i0forward_frame_2 - 1.6e-62 211.9 0.1 1.9e-62 211.7 0.1 1.0 1 0 0 1 1 1 1 FAD binding domain Baculo_11_kDa PF06143.11 NODE_31733_length_686_cov_3.938556_g25166_i0forward_frame_2 - 0.058 13.0 0.1 11 5.7 0.0 2.4 2 0 0 2 2 2 0 Baculovirus 11 kDa family LAP1C PF05609.12 NODE_31696_length_686_cov_530.033794_g25129_i0reverse_frame_3 - 0.0022 17.2 5.9 0.0022 17.2 5.9 1.4 1 1 0 1 1 1 1 Lamina-associated polypeptide 1C (LAP1C) Pex14_N PF04695.13 NODE_31696_length_686_cov_530.033794_g25129_i0reverse_frame_3 - 0.0075 16.9 2.6 0.011 16.4 2.6 1.3 1 0 0 1 1 1 1 Peroxisomal membrane anchor protein (Pex14p) conserved region CDC45 PF02724.14 NODE_31696_length_686_cov_530.033794_g25129_i0reverse_frame_3 - 0.0082 14.5 9.3 0.011 14.1 9.3 1.1 1 0 0 1 1 1 1 CDC45-like protein SAPS PF04499.15 NODE_31696_length_686_cov_530.033794_g25129_i0reverse_frame_3 - 0.15 10.8 9.9 0.19 10.5 9.9 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Zip PF02535.22 NODE_31696_length_686_cov_530.033794_g25129_i0reverse_frame_3 - 7.1 5.7 6.9 9.9 5.3 6.9 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Popeye PF04831.13 NODE_31696_length_686_cov_530.033794_g25129_i0forward_frame_2 - 0.66 10.1 7.9 0.29 11.3 5.2 1.9 2 0 0 2 2 2 0 Popeye protein conserved region Ku_PK_bind PF08785.11 NODE_31681_length_687_cov_14.444785_g25119_i0forward_frame_2 - 0.26 11.4 5.1 0.53 10.4 3.5 2.2 1 1 1 2 2 2 0 Ku C terminal domain like DUF2614 PF11023.8 NODE_31674_length_687_cov_91.639571_g25112_i0reverse_frame_2 - 0.0057 16.7 0.9 0.0057 16.7 0.9 2.3 2 0 0 2 2 2 1 Zinc-ribbon containing domain DUF5100 PF17029.5 NODE_31656_length_687_cov_286.340491_g25095_i0reverse_frame_2 - 0.1 12.4 0.0 1.9 8.3 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF5100) RINGv PF12906.7 NODE_31656_length_687_cov_286.340491_g25095_i0forward_frame_2 - 0.015 15.4 5.1 2.4 8.4 2.2 2.6 2 0 0 2 2 2 0 RING-variant domain PAP1 PF08601.10 NODE_31650_length_687_cov_1589.070552_g25089_i0reverse_frame_3 - 1.7 8.3 11.6 2 8.1 11.6 1.1 1 0 0 1 1 1 0 Transcription factor PAP1 PsaL PF02605.15 NODE_31650_length_687_cov_1589.070552_g25089_i0reverse_frame_2 - 0.071 12.8 0.3 0.14 11.8 0.3 1.5 1 0 0 1 1 1 0 Photosystem I reaction centre subunit XI GST_C PF00043.25 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 2e-09 37.6 0.1 3.5e-09 36.8 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 1.4e-08 35.1 0.0 2.9e-08 34.0 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 4e-08 33.5 0.0 6.9e-08 32.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 1e-06 28.8 0.1 2.7e-06 27.5 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 0.00045 20.2 0.0 0.0008 19.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 0.065 13.5 0.0 0.35 11.2 0.0 2.0 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain DUF2878 PF11086.8 ORF98807 - 0.0071 16.6 1.7 0.0071 16.6 1.7 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2878) FAM209 PF15206.6 ORF98807 - 0.02 14.7 0.0 0.038 13.8 0.0 1.5 1 0 0 1 1 1 0 FAM209 family Ribosomal_S27 PF01599.19 ORF98807 - 0.055 13.6 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein S27a START PF01852.19 ORF97195 - 2.3e-09 37.0 0.0 3e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 START domain FlgO PF17680.1 ORF97195 - 0.11 12.2 0.0 0.26 11.0 0.0 1.6 2 0 0 2 2 2 0 FlgO protein cNMP_binding PF00027.29 ORF96658 - 1.6e-12 47.3 0.0 2.5e-12 46.7 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Syntaxin PF00804.25 ORF96658 - 0.003 17.2 1.1 2 8.1 0.1 2.1 2 0 0 2 2 2 2 Syntaxin ELFV_dehydrog PF00208.21 ORF96658 - 0.025 14.3 0.2 1.2 8.8 0.0 2.1 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Pre-PUA PF17832.1 ORF96658 - 0.073 13.8 0.3 1.7 9.4 0.0 2.5 2 0 0 2 2 2 0 Pre-PUA-like domain AMPK1_CBM PF16561.5 ORF9526 - 1.2e-14 54.3 0.7 1.8e-14 53.7 0.7 1.3 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase CBM_48 PF02922.18 ORF9526 - 0.00023 21.5 0.2 0.00049 20.4 0.2 1.5 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Glycos_transf_1 PF00534.20 ORF9526 - 0.00078 19.0 0.0 0.0012 18.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 CBM53 PF16760.5 ORF9526 - 0.03 14.9 0.7 0.1 13.2 0.3 2.0 2 0 0 2 2 2 0 Starch/carbohydrate-binding module (family 53) Pkinase_Tyr PF07714.17 ORF93618 - 2.9e-45 154.6 0.0 3.3e-45 154.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF93618 - 2.5e-36 125.4 0.0 3e-36 125.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF93618 - 0.03 13.1 0.0 0.038 12.8 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF93618 - 0.073 13.0 0.0 0.094 12.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family ATP-synt_B PF00430.18 ORF92981 - 3.5e-10 40.1 5.8 3.5e-10 40.1 5.8 1.5 2 0 0 2 2 2 1 ATP synthase B/B' CF(0) IFT57 PF10498.9 ORF92981 - 0.011 14.8 7.1 0.018 14.1 6.7 1.5 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Seryl_tRNA_N PF02403.22 ORF92981 - 0.018 15.3 10.0 0.018 15.3 10.0 1.6 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Cystatin PF00031.21 ORF92981 - 0.019 15.2 1.4 0.023 15.0 0.5 1.7 2 0 0 2 2 1 0 Cystatin domain ARGLU PF15346.6 ORF92981 - 0.067 13.1 5.6 0.091 12.6 5.6 1.1 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 DUF3810 PF12725.7 ORF92981 - 0.12 11.7 2.3 0.2 11.0 2.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) DUF842 PF05811.13 ORF92981 - 0.12 12.1 3.5 0.16 11.6 3.5 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) Bravo_FIGEY PF13882.6 ORF92981 - 0.16 13.3 7.3 2.4 9.6 2.5 2.2 1 1 1 2 2 2 0 Bravo-like intracellular region DUF4570 PF15134.6 ORF92981 - 0.19 11.8 3.6 0.23 11.5 2.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4570) LMBR1 PF04791.16 ORF92981 - 0.37 9.6 2.4 0.54 9.1 2.4 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Peptidase_S46 PF10459.9 ORF92981 - 0.39 9.3 10.2 0.48 9.0 10.2 1.0 1 0 0 1 1 1 0 Peptidase S46 Fib_alpha PF08702.10 ORF92981 - 0.7 10.1 8.6 0.76 10.0 5.7 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family V-ATPase_G_2 PF16999.5 ORF92981 - 1.4 9.4 14.9 1.6 9.2 13.9 1.6 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit TBCC_N PF16752.5 ORF92981 - 1.4 9.3 11.6 2.1 8.8 10.9 1.7 1 1 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain Jnk-SapK_ap_N PF09744.9 ORF92981 - 2.3 8.4 10.4 3 8.0 10.4 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Atg14 PF10186.9 ORF92981 - 7.7 5.5 9.0 10 5.1 9.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FKBP_C PF00254.28 ORF92651 - 3.6e-27 94.5 0.0 5.6e-27 93.9 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF1356 PF07092.12 ORF92651 - 0.12 11.6 0.1 0.19 11.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) FKBP_C PF00254.28 ORF90411 - 3.6e-27 94.5 0.0 5.6e-27 93.9 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF1356 PF07092.12 ORF90411 - 0.12 11.6 0.1 0.19 11.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) MORN PF02493.20 ORF90112 - 5.4e-22 76.3 41.1 2.2e-06 27.2 2.5 7.2 7 0 0 7 7 7 5 MORN repeat Tudor_2 PF18104.1 ORF90112 - 6.3 6.6 7.2 8.4 6.2 0.1 3.8 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain YopD PF05844.12 ORF84939 - 0.034 13.2 0.0 0.044 12.8 0.0 1.1 1 0 0 1 1 1 0 YopD protein SepSecS PF05889.13 ORF82386 - 6.9e-44 150.1 0.0 8.3e-44 149.8 0.0 1.1 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Beta_elim_lyase PF01212.21 ORF82386 - 0.031 13.5 0.0 0.044 13.1 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase Lipase_chap PF03280.14 ORF80630 - 0.055 13.4 0.4 0.081 12.9 0.4 1.2 1 0 0 1 1 1 0 Proteobacterial lipase chaperone protein RWD PF05773.22 ORF80630 - 0.23 11.8 0.0 0.36 11.1 0.0 1.3 1 0 0 1 1 1 0 RWD domain Kelch_5 PF13854.6 ORF78419 - 1.5e-26 91.9 0.2 5.3e-08 32.7 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_4 PF13418.6 ORF78419 - 2.4e-26 91.5 0.3 5.5e-07 29.5 0.0 4.2 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF78419 - 5.4e-23 80.3 0.0 8.8e-07 28.4 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_6 PF13964.6 ORF78419 - 2.9e-20 71.8 0.5 6.1e-06 26.3 0.0 4.1 3 1 1 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF78419 - 1.9e-19 69.4 0.0 1.7e-06 28.2 0.0 5.0 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF78419 - 2.5e-18 65.2 0.1 5.7e-05 22.9 0.0 4.2 4 0 0 4 4 4 3 Kelch motif DUF2321 PF10083.9 ORF77666 - 0.11 12.1 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) PA PF02225.22 ORF77019 - 2.2e-07 30.8 0.0 3.5e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 PA domain START PF01852.19 ORF74083 - 4.3e-11 42.6 0.0 5.4e-11 42.3 0.0 1.1 1 0 0 1 1 1 1 START domain Ntox28 PF15605.6 ORF74083 - 0.027 14.7 0.0 0.076 13.3 0.0 1.7 2 0 0 2 2 2 0 Bacterial toxin 28 FlbD PF06289.11 ORF74083 - 1.3 8.7 6.7 11 5.7 0.1 3.3 3 1 1 4 4 4 0 Flagellar and Swarming motility proteins cNMP_binding PF00027.29 ORF69313 - 1.6e-12 47.3 0.0 2.5e-12 46.7 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Syntaxin PF00804.25 ORF69313 - 0.003 17.2 1.1 2 8.1 0.1 2.1 2 0 0 2 2 2 2 Syntaxin ELFV_dehydrog PF00208.21 ORF69313 - 0.025 14.3 0.2 1.2 8.8 0.0 2.1 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Pre-PUA PF17832.1 ORF69313 - 0.073 13.8 0.3 1.7 9.4 0.0 2.5 2 0 0 2 2 2 0 Pre-PUA-like domain Glycos_transf_1 PF00534.20 ORF67346 - 2.9e-21 75.7 0.0 4.3e-21 75.2 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF67346 - 1.3e-16 61.3 0.0 2.2e-16 60.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF67346 - 0.00011 22.5 0.0 0.00022 21.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 ECM11 PF15463.6 ORF67346 - 0.0084 16.7 0.2 0.012 16.2 0.2 1.2 1 0 0 1 1 1 1 Extracellular mutant protein 11 YhfZ_C PF14503.6 ORF6659 - 1.7e-83 279.8 0.0 1.8e-83 279.7 0.0 1.0 1 0 0 1 1 1 1 YhfZ C-terminal domain Peptidase_C1 PF00112.23 ORF63603 - 1.7e-45 155.8 8.9 1.9e-45 155.6 8.9 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Fer2_4 PF13510.6 ORF63603 - 0.26 11.4 0.7 0.55 10.3 0.7 1.7 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Peptidase_S41 PF03572.18 ORF63001 - 3.7e-18 65.6 0.0 7.4e-18 64.7 0.0 1.5 1 1 0 1 1 1 1 Peptidase family S41 AdenylateSensor PF16579.5 ORF62269 - 0.03 14.8 0.1 0.14 12.6 0.1 1.9 1 1 0 1 1 1 0 Adenylate sensor of SNF1-like protein kinase NLRC4_HD2 PF17776.1 ORF61108 - 0.16 12.5 0.4 16 6.1 0.2 2.8 2 1 1 3 3 3 0 NLRC4 helical domain HD2 tRNA-synt_2c PF01411.19 ORF60920 - 1.8e-68 231.4 0.0 2.2e-68 231.2 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) OSTbeta PF15048.6 ORF58494 - 0.22 11.7 0.2 0.63 10.2 0.2 1.8 1 1 0 1 1 1 0 Organic solute transporter subunit beta protein CrgA PF06781.12 ORF58494 - 0.4 10.8 3.7 0.56 10.3 0.3 2.4 2 0 0 2 2 2 0 Cell division protein CrgA FKBP_C PF00254.28 ORF55431 - 3.6e-27 94.5 0.0 5.6e-27 93.9 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF1356 PF07092.12 ORF55431 - 0.12 11.6 0.1 0.19 11.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) LRR_1 PF00560.33 ORF55157 - 2.4e-07 30.4 10.6 1.4 9.7 0.1 5.9 6 0 0 6 6 6 3 Leucine Rich Repeat LRR_4 PF12799.7 ORF55157 - 8e-07 29.3 18.6 0.0082 16.5 3.5 4.9 4 1 2 6 6 6 4 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 ORF55157 - 6.4e-06 25.8 11.0 0.29 11.3 0.3 4.8 4 0 0 4 4 4 3 Leucine Rich repeat LRR_8 PF13855.6 ORF55157 - 5.7e-05 22.8 19.3 0.028 14.2 0.5 4.9 5 1 0 5 5 5 3 Leucine rich repeat tRNA-synt_2c PF01411.19 ORF51838 - 1.8e-68 231.4 0.0 2.2e-68 231.2 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) CUE PF02845.16 ORF50414 - 4.3e-06 26.3 0.0 7.6e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 CUE domain CmlA_N PF18456.1 ORF50414 - 0.018 14.3 0.2 0.025 13.9 0.2 1.3 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain FAM72 PF14976.6 ORF50414 - 0.067 13.3 0.0 0.21 11.8 0.0 1.8 1 0 0 1 1 1 0 FAM72 protein CDC45 PF02724.14 ORF50414 - 0.82 7.9 9.8 0.72 8.1 9.8 1.1 1 0 0 1 1 1 0 CDC45-like protein HEAT_2 PF13646.6 ORF50008 - 7.7e-23 80.7 7.6 9.4e-08 32.4 0.0 3.2 1 1 2 3 3 3 3 HEAT repeats HEAT PF02985.22 ORF50008 - 2.9e-17 61.3 8.5 0.0022 18.1 0.3 6.2 6 0 0 6 6 6 4 HEAT repeat HEAT_EZ PF13513.6 ORF50008 - 1.3e-06 28.8 11.7 0.49 11.0 0.1 5.6 4 2 1 5 5 5 3 HEAT-like repeat HTH_IclR PF09339.10 ORF50008 - 8e-05 22.4 0.8 0.14 12.0 0.1 2.5 2 0 0 2 2 2 2 IclR helix-turn-helix domain TAF PF02969.17 ORF50008 - 0.0015 18.6 0.1 0.01 16.0 0.0 2.2 2 0 0 2 2 2 1 TATA box binding protein associated factor (TAF) Cnd1 PF12717.7 ORF50008 - 0.0066 16.5 0.0 0.12 12.4 0.0 2.6 1 1 1 2 2 2 1 non-SMC mitotic condensation complex subunit 1 V-ATPase_H_C PF11698.8 ORF50008 - 0.025 14.7 0.1 17 5.6 0.0 3.3 3 1 1 4 4 4 0 V-ATPase subunit H Cnd3 PF12719.7 ORF50008 - 0.034 13.4 0.0 0.79 8.8 0.0 2.5 1 1 0 1 1 1 0 Nuclear condensing complex subunits, C-term domain IFRD PF05004.13 ORF50008 - 0.04 13.0 2.5 8.4 5.4 0.8 3.0 2 1 0 2 2 2 0 Interferon-related developmental regulator (IFRD) Adaptin_N PF01602.20 ORF50008 - 0.055 12.0 0.1 0.23 10.0 0.0 2.0 1 1 0 2 2 2 0 Adaptin N terminal region HEAT_PBS PF03130.16 ORF50008 - 0.35 11.7 14.8 0.77 10.6 0.1 5.9 7 0 0 7 7 7 0 PBS lyase HEAT-like repeat KH_1 PF00013.29 ORF49784 - 1.3e-21 76.1 0.2 7.3e-11 41.7 0.0 2.2 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF49784 - 0.00081 19.2 0.2 0.46 10.3 0.0 2.2 2 0 0 2 2 2 2 KH domain DUF4936 PF16290.5 ORF49784 - 0.0021 18.7 0.1 0.82 10.4 0.0 2.9 2 1 1 3 3 3 1 Domain of unknown function (DUF4936) QRPTase_N PF02749.16 ORF49784 - 0.064 13.3 0.4 15 5.7 0.0 2.3 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, N-terminal domain S-AdoMet_synt_C PF02773.16 ORF46187 - 0.054 13.5 0.3 0.14 12.1 0.1 1.8 1 1 1 2 2 2 0 S-adenosylmethionine synthetase, C-terminal domain DUF1664 PF07889.12 ORF46187 - 0.089 12.8 1.0 0.2 11.7 0.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Thioredoxin_4 PF13462.6 ORF45874 - 1e-08 35.5 0.0 2.5e-08 34.2 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF45874 - 0.00013 21.8 0.1 0.17 11.6 0.0 2.1 1 1 0 2 2 2 2 DSBA-like thioredoxin domain Fer2_3 PF13085.6 ORF45874 - 0.014 15.4 0.0 0.027 14.5 0.0 1.5 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF1349 PF07081.11 ORF44336 - 5.4e-38 130.5 0.0 7.3e-38 130.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1349) GH43_C2 PF17851.1 ORF44336 - 0.0028 17.4 0.0 0.0059 16.4 0.0 1.6 1 1 0 1 1 1 1 Beta xylosidase C-terminal Concanavalin A-like domain Pkinase PF00069.25 ORF4223 - 6.7e-51 173.2 0.4 7.6e-51 173.0 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4223 - 7.9e-27 94.2 0.0 1e-26 93.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF4223 - 1.7e-05 24.9 0.0 0.0028 17.6 0.0 2.1 2 0 0 2 2 2 2 Phosphotransferase enzyme family ABC1 PF03109.16 ORF4223 - 0.0017 18.5 0.2 0.0036 17.5 0.1 1.6 1 1 0 1 1 1 1 ABC1 family Kdo PF06293.14 ORF4223 - 0.0044 16.4 0.1 0.0064 15.9 0.1 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family PAH PF02671.21 ORF4223 - 0.047 13.8 0.0 0.16 12.2 0.0 1.9 1 0 0 1 1 1 0 Paired amphipathic helix repeat DUF505 PF04458.12 ORF40728 - 0.14 10.4 0.0 0.17 10.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Pkinase PF00069.25 ORF39399 - 5.4e-64 216.1 0.0 5.9e-64 216.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39399 - 7e-31 107.4 0.0 8.3e-31 107.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF39399 - 4.5e-06 26.2 0.0 0.00014 21.3 0.0 2.3 2 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF39399 - 2.2e-05 23.6 1.2 0.00024 20.2 1.2 2.0 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF39399 - 0.0055 16.1 0.1 0.0083 15.5 0.1 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF39399 - 0.0092 15.9 0.0 0.019 14.9 0.0 1.5 2 0 0 2 2 2 1 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF39399 - 0.025 13.6 1.2 0.09 11.8 0.1 1.9 1 1 1 2 2 2 0 Seadornavirus VP7 FTA2 PF13095.6 ORF39399 - 0.038 13.6 0.1 4.7 6.8 0.0 2.2 1 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 DUF1451 PF07295.11 ORF39399 - 0.064 13.3 0.0 0.093 12.8 0.0 1.3 1 0 0 1 1 1 0 Zinc-ribbon containing domain Pkinase_fungal PF17667.1 ORF39399 - 0.095 11.5 0.1 0.16 10.7 0.0 1.3 1 1 0 1 1 1 0 Fungal protein kinase Ribonuc_L-PSP PF01042.21 ORF39063 - 7.8e-13 48.5 0.0 4.7e-05 23.4 0.0 2.2 2 0 0 2 2 2 2 Endoribonuclease L-PSP YojJ PF10372.9 ORF38707 - 0.06 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial membrane-spanning protein N-terminus MFS_1 PF07690.16 ORF35924 - 2.3e-07 30.1 11.3 2.3e-07 30.1 11.3 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily EF-hand_7 PF13499.6 ORF35418 - 1.3e-17 64.0 4.1 5e-09 36.5 0.2 3.1 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF35418 - 1.6e-16 58.5 6.0 7.7e-07 28.2 0.0 5.3 6 0 0 6 6 6 3 EF hand EF-hand_6 PF13405.6 ORF35418 - 3.9e-12 45.0 0.6 0.00071 19.3 0.0 4.2 4 1 1 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF35418 - 1.1e-08 34.8 0.1 0.00059 19.6 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF35418 - 1.6e-06 27.4 0.8 0.0012 18.2 0.0 3.1 3 0 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF35418 - 0.0066 16.7 0.4 0.029 14.7 0.4 2.1 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF35418 - 0.014 16.2 0.1 0.78 10.6 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain YppF PF14178.6 ORF35418 - 0.028 14.3 0.0 10 6.1 0.0 2.5 2 0 0 2 2 2 0 YppF-like protein IL12p40_C PF10420.9 ORF35418 - 0.12 12.9 0.5 0.23 12.0 0.5 1.4 1 0 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus NAD_binding_10 PF13460.6 ORF30461 - 2.4e-17 63.4 0.0 3e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 ORF30461 - 0.014 14.9 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Abhydro_lipase PF04083.16 ORF30045 - 1.1e-18 66.6 0.0 2e-18 65.7 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF30045 - 1e-06 28.6 0.1 1.2e-06 28.4 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Aldo_ket_red PF00248.21 ORF28127 - 3.9e-40 137.9 0.0 4.5e-39 134.4 0.0 1.9 1 1 0 1 1 1 1 Aldo/keto reductase family THUMP PF02926.17 ORF24748 - 3.3e-05 24.0 0.1 6e-05 23.2 0.1 1.5 1 1 0 1 1 1 1 THUMP domain VESA1_N PF12785.7 ORF24701 - 0.028 13.4 0.2 0.028 13.4 0.2 1.5 2 0 0 2 2 2 0 Variant erythrocyte surface antigen-1 Nnf1 PF03980.14 ORF24701 - 0.11 12.8 0.6 5.5 7.4 0.0 2.4 1 1 1 2 2 2 0 Nnf1 RAMP4 PF06624.12 ORF24701 - 0.26 11.4 1.7 0.64 10.1 1.7 1.6 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Ank_2 PF12796.7 ORF23398 - 5.4e-11 42.9 0.0 3e-10 40.6 0.0 2.1 2 1 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF23398 - 1.4e-08 34.8 0.0 2e-05 24.7 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF23398 - 7.1e-08 32.1 0.0 0.0098 16.3 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF23398 - 1.1e-07 32.0 0.0 0.0019 18.6 0.0 3.4 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF23398 - 4.5e-07 30.3 0.0 0.00029 21.3 0.0 2.8 1 1 1 2 2 2 2 Ankyrin repeats (many copies) RsdA_SigD_bd PF16751.5 ORF23398 - 0.1 12.9 0.1 0.28 11.5 0.1 1.8 1 0 0 1 1 1 0 Anti-sigma-D factor RsdA to sigma factor binding region Ank_4 PF13637.6 ORF22877 - 9.6e-14 51.6 0.3 0.00034 21.1 0.0 3.5 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF22877 - 2e-12 47.0 1.1 0.00034 20.9 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF22877 - 1.1e-11 43.9 0.4 0.012 16.0 0.0 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank_2 PF12796.7 ORF22877 - 3.1e-11 43.7 0.0 7e-06 26.5 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF22877 - 7e-08 32.6 0.2 1.1 9.7 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeats (many copies) DUF591 PF04569.14 ORF22577 - 0.6 10.2 0.1 0.6 10.2 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function p450 PF00067.22 ORF20631 - 5.6e-39 134.2 0.0 6.2e-39 134.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Coa1 PF08695.10 ORF20631 - 0.013 15.2 0.0 0.023 14.4 0.0 1.3 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 Cyclin PF08613.11 ORF19334 - 6.9e-06 26.5 0.6 6.9e-06 26.5 0.6 2.2 2 1 1 3 3 3 1 Cyclin MMU163 PF17119.5 ORF19334 - 0.073 12.2 0.2 0.12 11.5 0.2 1.4 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis Colicin_E5 PF12106.8 ORF19041 - 0.0031 17.8 1.5 0.032 14.5 0.9 2.3 2 0 0 2 2 2 1 Colicin E5 ribonuclease domain DUF3659 PF12396.8 ORF19041 - 0.013 15.4 0.6 0.032 14.1 0.6 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3659) DNA_pol_alpha_N PF12254.8 ORF19041 - 0.31 11.2 6.7 0.87 9.7 6.7 1.8 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal GST_N_3 PF13417.6 ORF18796 - 1.4e-08 35.0 0.0 2.2e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF18796 - 5.5e-07 29.8 0.0 9.4e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF18796 - 9.2e-05 22.7 0.0 0.00017 21.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF18796 - 0.00079 19.4 0.0 0.0019 18.2 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF18796 - 0.0012 19.0 0.0 0.0029 17.8 0.0 1.7 1 0 0 1 1 1 1 Glutaredoxin GST_N_4 PF17172.4 ORF18796 - 0.0017 19.1 0.0 0.0032 18.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain B9-C2 PF07162.11 ORF18042 - 4.7e-43 147.3 0.0 5.7e-43 147.0 0.0 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein HCMV_UL124 PF17609.2 ORF17629 - 2.4 8.4 7.7 1.4 9.1 1.7 2.4 1 1 0 2 2 2 0 Family of unknown function Peptidase_C1 PF00112.23 ORF17131 - 1.7e-45 155.8 8.9 1.9e-45 155.6 8.9 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Fer2_4 PF13510.6 ORF17131 - 0.26 11.4 0.7 0.55 10.3 0.7 1.7 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Aldolase_II PF00596.21 ORF16641 - 2.6e-47 161.2 0.3 3.2e-47 160.9 0.3 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Ribophorin_I PF04597.14 ORF16641 - 0.0034 16.6 0.0 0.0062 15.8 0.0 1.3 1 0 0 1 1 1 1 Ribophorin I Glyco_transf_4 PF13439.6 ORF16641 - 0.11 12.5 0.7 0.38 10.7 0.1 2.0 2 0 0 2 2 2 0 Glycosyltransferase Family 4 cobW PF02492.19 ORF16641 - 0.21 11.1 0.0 0.69 9.5 0.0 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Pkinase PF00069.25 ORF15362 - 9.2e-34 117.0 0.2 3.2e-33 115.2 0.2 1.7 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF15362 - 1e-23 83.9 0.0 4.2e-17 62.3 0.0 2.1 1 1 1 2 2 2 2 Protein tyrosine kinase Kdo PF06293.14 ORF15362 - 2e-05 24.1 0.2 3.3e-05 23.3 0.2 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF15362 - 0.008 15.5 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF15362 - 0.0089 16.0 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF15362 - 0.018 13.8 0.0 0.026 13.3 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase FTA2 PF13095.6 ORF15362 - 0.025 14.2 0.1 0.062 12.9 0.0 1.7 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 TPR_19 PF14559.6 ORF14925 - 5.1e-09 36.5 0.7 1.3e-05 25.6 0.0 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF14925 - 1.2e-07 31.3 5.2 0.035 14.2 1.8 4.6 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF14925 - 6e-06 26.6 2.8 0.21 12.3 0.0 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF14925 - 1.5e-05 25.4 0.9 0.53 11.3 0.0 4.2 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF14925 - 7.3e-05 23.0 3.2 0.041 14.2 1.2 3.7 2 2 1 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF14925 - 0.00026 21.6 0.2 0.11 13.1 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF14925 - 0.00071 19.7 5.2 0.22 11.8 0.3 2.6 2 1 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.6 ORF14925 - 0.0032 17.6 6.2 3.4 8.1 0.0 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat Cnd3 PF12719.7 ORF14925 - 0.0046 16.2 0.9 0.0084 15.3 0.7 1.6 1 1 0 1 1 1 1 Nuclear condensing complex subunits, C-term domain TPR_17 PF13431.6 ORF14925 - 0.0046 17.2 1.5 0.54 10.8 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_15 PF13429.6 ORF14925 - 0.0053 16.0 0.9 0.037 13.2 0.4 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF14925 - 0.006 16.4 8.1 0.38 10.7 1.4 4.0 5 0 0 5 5 4 2 Tetratricopeptide repeat AbiJ_NTD5 PF18865.1 ORF14925 - 0.012 15.4 0.0 0.86 9.4 0.0 2.4 2 0 0 2 2 2 0 AbiJ N-terminal domain 5 TPR_7 PF13176.6 ORF14925 - 0.026 14.5 0.1 24 5.2 0.0 3.4 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF14925 - 0.054 13.2 0.4 0.59 9.9 0.0 2.7 2 1 0 2 2 2 0 TPR repeat RRM_1 PF00076.22 ORF14925 - 0.081 12.8 0.1 2.7 7.9 0.0 3.0 3 1 0 3 3 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AAA_9 PF12781.7 ORF14118 - 3.8e-62 209.3 3.8 4.5e-62 209.0 3.8 1.1 1 0 0 1 1 1 1 ATP-binding dynein motor region Glycos_transf_1 PF00534.20 ORF12436 - 9.7e-33 113.1 0.1 3.2e-32 111.4 0.0 1.6 1 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF12436 - 8.4e-21 74.8 0.0 1.3e-20 74.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Abhydrolase_2 PF02230.16 ORF110369 - 3.9e-12 46.4 0.0 5.7e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF110369 - 0.021 15.4 0.3 0.058 14.0 0.2 1.8 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF4417 PF14386.6 ORF110369 - 0.14 11.8 0.0 0.44 10.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4417) Abhydrolase_3 PF07859.13 ORF110369 - 0.18 11.6 0.0 0.25 11.1 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold TFIID-31kDa PF02291.15 ORF109948 - 4e-18 65.7 0.6 6.6e-18 64.9 0.6 1.3 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit Mre11_DNA_bind PF04152.14 ORF109948 - 0.042 14.2 0.2 0.042 14.2 0.2 2.1 2 0 0 2 2 2 0 Mre11 DNA-binding presumed domain Cyclophil_like PF04126.13 ORF109948 - 0.14 12.0 0.0 2.8 7.8 0.0 2.1 2 0 0 2 2 2 0 Cyclophilin-like UCH PF00443.29 ORF109183 - 0.0036 16.8 7.4 0.0056 16.2 0.3 2.3 2 0 0 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase COX1 PF00115.20 ORF109158 - 3.7e-13 49.1 8.0 3.7e-13 49.1 8.0 2.2 2 0 0 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I Yip1 PF04893.17 ORF109158 - 4.6e-05 23.2 2.9 0.069 12.9 0.5 2.2 2 0 0 2 2 2 2 Yip1 domain ABC2_membrane_3 PF12698.7 ORF109158 - 0.014 14.5 1.5 0.019 14.1 1.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF109158 - 0.022 13.6 0.6 2.3 6.9 0.5 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) SUR7 PF06687.12 ORF109158 - 0.13 11.9 0.1 0.13 11.9 0.1 1.8 2 0 0 2 2 2 0 SUR7/PalI family DUF2189 PF09955.9 ORF109158 - 0.16 12.2 6.3 0.12 12.7 2.2 2.1 2 0 0 2 2 2 0 Predicted integral membrane protein (DUF2189) Phage_holin_3_6 PF07332.11 ORF109158 - 3.1 7.9 8.8 9.8 6.3 1.9 2.3 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3844 PF12955.7 ORF108670 - 0.02 15.0 0.5 0.034 14.3 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) DUF1180 PF06679.12 ORF108670 - 0.45 10.9 6.0 0.12 12.8 1.8 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1180) IMUP PF15761.5 ORF106706 - 0.0067 17.1 0.2 0.011 16.4 0.2 1.4 1 0 0 1 1 1 1 Immortalisation up-regulated protein MRI PF15325.6 ORF106706 - 0.21 12.7 3.2 0.44 11.6 3.2 1.6 1 0 0 1 1 1 0 Modulator of retrovirus infection Sporozoite_P67 PF05642.11 ORF106706 - 0.84 7.6 6.0 0.98 7.4 6.0 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen AF-4 PF05110.13 ORF106706 - 3.6 5.6 9.5 4.8 5.1 9.5 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein Methyltransf_24 PF13578.6 ORF103452 - 8.4e-15 55.7 0.1 1.2e-14 55.2 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Polysacc_synt PF01943.17 ORF103025 - 0.00046 19.6 1.0 0.00046 19.6 1.0 1.5 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein TIR_2 PF13676.6 ORF103025 - 0.0029 18.2 0.0 0.0049 17.5 0.0 1.3 1 0 0 1 1 1 1 TIR domain HET PF06985.11 ORF103025 - 0.59 10.5 1.6 1.5 9.2 0.0 2.0 1 1 1 2 2 2 0 Heterokaryon incompatibility protein (HET) BBE PF08031.12 ORF102769 - 1.3e-05 25.1 0.0 2.5e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Berberine and berberine like SAS-6_N PF16531.5 ORF102591 - 9e-29 99.9 0.9 1.7e-28 99.1 0.9 1.5 1 0 0 1 1 1 1 Centriolar protein SAS N-terminal PCI PF01399.27 ORF102528 - 8.6e-09 35.9 2.8 8.6e-09 35.9 2.8 2.1 2 1 0 2 2 2 1 PCI domain HAUS-augmin3 PF14932.6 ORF102528 - 0.35 10.4 9.8 0.09 12.3 2.7 2.2 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Ubiq_cyt_C_chap PF03981.12 ORF102528 - 0.6 10.2 4.4 7.7 6.6 0.2 2.3 2 0 0 2 2 2 0 Ubiquinol-cytochrome C chaperone Peptidase_C1 PF00112.23 ORF102022 - 1.7e-45 155.8 8.9 1.9e-45 155.6 8.9 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Fer2_4 PF13510.6 ORF102022 - 0.26 11.4 0.7 0.55 10.3 0.7 1.7 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain NINJA_B PF16136.5 ORF10111 - 0.11 12.8 2.1 0.82 10.1 0.2 2.2 2 0 0 2 2 2 0 Putative nuclear localisation signal Nuc_sug_transp PF04142.15 ORF100812 - 1.8e-61 208.0 11.8 2e-61 207.9 11.8 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF100812 - 6.6e-09 36.1 21.0 2.7e-05 24.4 12.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 ORF100812 - 9.6e-06 25.0 3.8 1.6e-05 24.3 3.8 1.5 1 1 0 1 1 1 1 UAA transporter family Phage_holin_3_3 PF16083.5 ORF100812 - 0.0098 16.0 0.5 0.0098 16.0 0.5 2.9 2 2 0 2 2 2 1 LydA holin phage, holin superfamily III Fer4_2 PF12797.7 NODE_32076_length_679_cov_75.628882_g25440_i0reverse_frame_1 - 0.24 11.6 4.2 0.28 11.4 2.6 2.0 2 0 0 2 2 2 0 4Fe-4S binding domain zf-LITAF-like PF10601.9 NODE_32066_length_679_cov_132.726708_g25430_i0forward_frame_1 - 2.9e-07 30.7 23.2 2.9e-07 30.7 23.2 2.0 1 1 1 2 2 2 1 LITAF-like zinc ribbon domain DUF4606 PF15379.6 NODE_32058_length_679_cov_173.450311_g25423_i0forward_frame_1 - 0.12 12.7 0.7 1.7 9.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4606) PK PF00224.21 NODE_32029_length_680_cov_2.998450_g25402_i0reverse_frame_1 - 6.1e-59 199.6 0.0 7.1e-59 199.4 0.0 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain DUF805 PF05656.14 NODE_32004_length_680_cov_124.522481_g25378_i0reverse_frame_1 - 9.1 6.7 13.9 0.81 10.1 3.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF805) HCV_NS2 PF01538.18 NODE_31992_length_680_cov_385.654574_g25368_i0reverse_frame_1 - 0.05 13.3 0.3 0.077 12.6 0.3 1.3 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 DUF4489 PF14879.6 NODE_31992_length_680_cov_385.654574_g25368_i0reverse_frame_1 - 0.17 12.0 2.8 0.083 13.0 0.7 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4489) Dna2 PF08696.11 NODE_31984_length_680_cov_3500.838760_g720_i7reverse_frame_1 - 0.016 15.0 2.7 0.044 13.6 2.7 1.7 1 1 0 1 1 1 0 DNA replication factor Dna2 Pro_sub2 PF18513.1 NODE_31984_length_680_cov_3500.838760_g720_i7reverse_frame_1 - 0.023 14.8 0.6 0.023 14.8 0.6 1.9 2 0 0 2 2 2 0 Prodomain subtilisin 2 RNA_pol_A_CTD PF03118.15 NODE_31984_length_680_cov_3500.838760_g720_i7forward_frame_1 - 0.078 12.8 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain RNA_pol_A_CTD PF03118.15 NODE_31982_length_680_cov_3792.114729_g720_i6reverse_frame_1 - 0.077 12.8 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain Dna2 PF08696.11 NODE_31982_length_680_cov_3792.114729_g720_i6forward_frame_1 - 0.016 15.0 2.7 0.044 13.6 2.7 1.7 1 1 0 1 1 1 0 DNA replication factor Dna2 Pro_sub2 PF18513.1 NODE_31982_length_680_cov_3792.114729_g720_i6forward_frame_1 - 0.023 14.8 0.6 0.023 14.8 0.6 1.9 2 0 0 2 2 2 0 Prodomain subtilisin 2 Molybdopterin PF00384.22 NODE_31939_length_682_cov_3.690881_g25331_i0reverse_frame_3 - 5e-29 101.5 0.1 6.6e-29 101.1 0.1 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase LRR_6 PF13516.6 NODE_31915_length_682_cov_230.510046_g25309_i0reverse_frame_3 - 1.3e-16 59.2 3.1 0.0022 17.9 0.2 5.9 6 0 0 6 6 6 5 Leucine Rich repeat LRR_4 PF12799.7 NODE_31915_length_682_cov_230.510046_g25309_i0reverse_frame_3 - 1.3e-05 25.4 1.8 2.3 8.7 0.1 4.4 2 2 2 4 4 4 3 Leucine Rich repeats (2 copies) TIR_2 PF13676.6 NODE_31915_length_682_cov_230.510046_g25309_i0reverse_frame_3 - 0.11 13.1 0.0 0.53 10.9 0.0 2.1 2 0 0 2 2 2 0 TIR domain Ig_C17orf99 PF17736.1 NODE_31911_length_682_cov_369.615147_g25305_i0reverse_frame_3 - 0.015 15.4 0.7 0.025 14.6 0.7 1.3 1 0 0 1 1 1 0 C17orf99 Ig domain ApoLp-III PF07464.11 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 0.086 12.9 10.3 1.4 9.0 0.2 2.3 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DUF1512 PF07431.12 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 0.19 10.7 2.7 0.21 10.6 1.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1512) DUF948 PF06103.11 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 0.22 11.8 1.8 20 5.6 0.6 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Coat_F PF07875.12 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 0.23 11.7 7.8 2.4 8.4 0.2 4.5 3 1 1 4 4 4 0 Coat F domain NPV_P10 PF05531.12 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 0.3 11.6 2.3 0.55 10.7 0.1 2.4 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein TolA_bind_tri PF16331.5 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 0.76 9.9 11.0 0.11 12.5 1.0 3.2 2 1 0 3 3 3 0 TolA binding protein trimerisation Baculo_PEP_C PF04513.12 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 1.1 9.3 4.1 21 5.1 4.1 2.5 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3338 PF11819.8 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 2.6 8.0 11.1 0.11 12.4 1.8 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF3338) FlxA PF14282.6 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 3.8 7.6 16.0 2.6 8.1 0.1 3.0 3 0 0 3 3 3 0 FlxA-like protein YtxH PF12732.7 NODE_31910_length_682_cov_439.525502_g25304_i0forward_frame_2 - 8.2 7.0 7.6 21 5.7 4.4 2.3 2 0 0 2 2 2 0 YtxH-like protein zf-AN1 PF01428.16 NODE_31900_length_682_cov_1987.500773_g25297_i0reverse_frame_3 - 0.0012 19.0 7.9 0.0012 19.0 7.9 1.8 2 0 0 2 2 2 1 AN1-like Zinc finger PHD_Oberon PF07227.11 NODE_31900_length_682_cov_1987.500773_g25297_i0reverse_frame_3 - 0.35 10.7 6.7 0.052 13.4 1.5 2.0 2 0 0 2 2 2 0 PHD - plant homeodomain finger protein Pkinase PF00069.25 NODE_31896_length_682_cov_4070.361669_g19647_i2reverse_frame_3 - 1.1e-37 129.8 0.1 1.2e-37 129.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_31896_length_682_cov_4070.361669_g19647_i2reverse_frame_3 - 4.7e-26 91.6 0.0 5.1e-26 91.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_31896_length_682_cov_4070.361669_g19647_i2reverse_frame_3 - 0.00097 18.2 0.1 0.0011 18.0 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 NODE_31896_length_682_cov_4070.361669_g19647_i2reverse_frame_3 - 0.0053 16.1 0.1 0.015 14.6 0.1 1.8 2 1 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_31896_length_682_cov_4070.361669_g19647_i2reverse_frame_3 - 0.019 14.3 0.0 0.027 13.8 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Cupin_4 PF08007.12 NODE_31888_length_683_cov_2.427469_g25289_i0reverse_frame_2 - 9.4e-69 232.3 0.5 1.1e-68 232.1 0.5 1.0 1 0 0 1 1 1 1 Cupin superfamily protein DUF5126 PF17166.4 NODE_31885_length_683_cov_5.348765_g25286_i0reverse_frame_2 - 0.17 11.8 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5126) DnaJ_C PF01556.18 NODE_31881_length_683_cov_76.945988_g25282_i0reverse_frame_3 - 2e-20 73.4 6.3 3.7e-20 72.5 6.3 1.5 1 1 0 1 1 1 1 DnaJ C terminal domain DUF1700 PF08006.11 NODE_31881_length_683_cov_76.945988_g25282_i0forward_frame_2 - 0.55 9.8 2.6 0.88 9.1 2.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks82.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks82.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks82.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks82.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TPMT PF05724.11 NODE_31835_length_684_cov_2.201849_g25248_i0reverse_frame_3 - 0.11 12.1 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) MotA_ExbB PF01618.16 NODE_31835_length_684_cov_2.201849_g25248_i0forward_frame_2 - 5.5e-06 26.2 0.2 5.5e-06 26.2 0.2 1.6 2 0 0 2 2 2 1 MotA/TolQ/ExbB proton channel family SpoVAB PF13782.6 NODE_31835_length_684_cov_2.201849_g25248_i0forward_frame_2 - 0.0043 17.3 0.7 0.0096 16.2 0.7 1.5 1 0 0 1 1 1 1 Stage V sporulation protein AB YopD PF05844.12 NODE_31835_length_684_cov_2.201849_g25248_i0forward_frame_2 - 0.059 12.4 0.1 0.25 10.3 0.1 1.9 1 1 1 2 2 2 0 YopD protein PC_rep PF01851.22 NODE_31834_length_684_cov_2.385208_g25247_i0reverse_frame_3 - 0.00056 20.2 1.0 0.13 12.8 0.2 3.0 3 0 0 3 3 3 2 Proteasome/cyclosome repeat ATP-gua_PtransN PF02807.15 NODE_31833_length_684_cov_2.768875_g25246_i0forward_frame_2 - 0.17 12.3 0.0 0.26 11.7 0.0 1.2 1 0 0 1 1 1 0 ATP:guanido phosphotransferase, N-terminal domain PfkB PF00294.24 NODE_31832_length_684_cov_2.816641_g25245_i0forward_frame_3 - 1e-37 130.1 0.1 1.2e-37 129.9 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 NODE_31832_length_684_cov_2.816641_g25245_i0forward_frame_3 - 0.11 11.9 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase PLU-1 PF08429.11 NODE_31832_length_684_cov_2.816641_g25245_i0forward_frame_3 - 0.12 11.5 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 PLU-1-like protein SEEK1 PF15357.6 NODE_31828_length_684_cov_22.531587_g25241_i0reverse_frame_3 - 0.071 13.3 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Psoriasis susceptibility 1 candidate 1 UCH PF00443.29 NODE_31828_length_684_cov_22.531587_g25241_i0reverse_frame_2 - 1.1e-14 54.5 5.0 1.1e-14 54.5 5.0 1.5 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase TMF_DNA_bd PF12329.8 NODE_31828_length_684_cov_22.531587_g25241_i0reverse_frame_2 - 5 7.2 12.2 0.48 10.5 0.3 3.3 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF3510 PF12022.8 NODE_31827_length_684_cov_22.662558_g25240_i0reverse_frame_3 - 0.0069 16.8 2.1 0.011 16.1 2.1 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF3510) FGFR3_TM PF18123.1 NODE_31813_length_684_cov_167.375963_g25227_i0reverse_frame_2 - 5.7 6.6 8.1 3.8 7.1 0.9 2.5 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain MyTH4 PF00784.17 NODE_31813_length_684_cov_167.375963_g25227_i0forward_frame_2 - 0.0011 19.4 3.0 1.3 9.6 3.0 2.5 1 1 0 1 1 1 1 MyTH4 domain PPR_1 PF12854.7 NODE_31804_length_684_cov_420.776579_g25220_i0reverse_frame_2 - 0.05 13.3 0.1 0.089 12.5 0.1 1.4 1 0 0 1 1 1 0 PPR repeat PPR PF01535.20 NODE_31804_length_684_cov_420.776579_g25220_i0reverse_frame_2 - 0.063 13.6 0.3 0.13 12.6 0.3 1.5 1 0 0 1 1 1 0 PPR repeat AMMECR1 PF01871.17 NODE_31804_length_684_cov_420.776579_g25220_i0forward_frame_3 - 8.9e-17 61.2 0.0 1.1e-16 60.8 0.0 1.2 1 0 0 1 1 1 1 AMMECR1 DUF2973 PF11189.8 NODE_31802_length_684_cov_566.038521_g2812_i3forward_frame_2 - 0.33 11.1 4.1 1.1 9.4 4.1 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) zf-RING_2 PF13639.6 ORF96525 - 2.6e-09 37.3 10.4 3.7e-09 36.8 10.4 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF96525 - 1e-05 25.7 10.5 5.5e-05 23.4 10.5 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF96525 - 0.00013 21.8 8.4 0.0002 21.3 8.4 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF96525 - 0.0025 17.6 6.7 0.0038 17.1 6.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF96525 - 0.013 15.4 10.1 0.024 14.5 10.1 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF96525 - 0.016 15.0 10.2 0.039 13.8 10.2 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF96525 - 0.041 14.1 8.2 0.21 11.8 8.2 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF96525 - 0.069 13.0 10.0 1.2 9.0 10.3 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-P11 PF03854.14 ORF96525 - 0.071 12.8 6.3 0.085 12.5 3.3 2.1 2 0 0 2 2 2 0 P-11 zinc finger Zn_ribbon_17 PF17120.5 ORF96525 - 0.098 12.3 7.0 0.19 11.4 7.0 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF96525 - 0.11 12.7 9.4 0.21 11.7 9.4 1.5 1 0 0 1 1 1 0 RING-variant domain zf-ANAPC11 PF12861.7 ORF96525 - 0.11 12.5 6.3 0.39 10.8 6.3 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF96525 - 1.5 8.9 9.6 13 5.9 10.0 2.1 1 1 1 2 2 2 0 RING-type zinc-finger zf-RING_11 PF17123.5 ORF96525 - 3.6 7.4 14.9 0.13 12.0 8.6 1.9 2 0 0 2 2 2 0 RING-like zinc finger COMM_domain PF07258.14 ORF95865 - 0.00049 20.2 1.9 0.0089 16.1 0.3 3.0 3 0 0 3 3 3 1 COMM domain CARD PF00619.21 ORF95865 - 0.11 12.5 0.6 1.5 8.9 0.1 2.5 2 0 0 2 2 2 0 Caspase recruitment domain P2 PF07194.11 ORF95865 - 0.12 12.5 0.2 0.12 12.5 0.2 2.3 3 1 0 3 3 3 0 P2 response regulator binding domain DnaI_N PF07319.11 ORF95865 - 0.81 10.4 4.0 0.36 11.5 0.5 2.2 2 1 1 3 3 3 0 Primosomal protein DnaI N-terminus DUF1298 PF06974.13 ORF93503 - 2.6e-09 37.2 0.0 3.6e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Methyltransf_25 PF13649.6 ORF92967 - 3.3e-11 43.7 0.0 3.2e-10 40.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF92967 - 2.2e-08 34.1 0.0 2.6e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF92967 - 3.3e-08 33.5 0.0 5.8e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF92967 - 9.2e-08 32.6 0.0 2.8e-07 31.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF92967 - 1e-07 32.6 0.0 4.4e-07 30.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_9 PF08003.11 ORF92967 - 0.0012 17.8 0.0 0.0022 17.0 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) MTS PF05175.14 ORF92967 - 0.0075 15.8 0.0 0.015 14.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 ORF92967 - 0.015 14.6 0.0 0.038 13.3 0.0 1.7 1 1 1 2 2 2 0 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 ORF92967 - 0.015 15.3 0.1 0.03 14.3 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase domain Astacin PF01400.24 ORF92967 - 0.09 12.4 0.6 5.2 6.6 0.1 2.2 2 0 0 2 2 2 0 Astacin (Peptidase family M12A) DUF496 PF04363.12 ORF92102 - 0.061 13.3 0.5 0.061 13.3 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF496) Aldedh PF00171.22 ORF90171 - 8e-56 189.5 0.0 9e-56 189.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family CRAL_TRIO PF00650.20 ORF88233 - 2.9e-24 85.6 0.0 3.8e-24 85.2 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF88233 - 0.0016 18.6 0.0 0.0026 17.9 0.0 1.2 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain PPR_2 PF13041.6 ORF87188 - 0.00016 21.8 0.0 0.57 10.4 0.0 3.3 1 1 3 4 4 4 3 PPR repeat family PPR_3 PF13812.6 ORF87188 - 0.044 13.9 0.0 3.8 7.7 0.0 3.1 2 1 0 2 2 2 0 Pentatricopeptide repeat domain PARP PF00644.20 ORF8710 - 8.8e-05 22.2 9.1 0.0017 18.0 4.3 2.2 2 0 0 2 2 2 2 Poly(ADP-ribose) polymerase catalytic domain SDA1 PF05285.12 ORF8710 - 0.058 12.8 24.4 0.091 12.2 24.4 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF8710 - 0.19 9.9 26.3 0.23 9.7 26.3 1.1 1 0 0 1 1 1 0 Nop14-like family Connexin PF00029.19 ORF8710 - 2.2 8.0 3.8 3 7.5 3.8 1.4 1 0 0 1 1 1 0 Connexin Zip PF02535.22 ORF8710 - 2.2 7.4 5.3 2.7 7.1 5.3 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter SAPS PF04499.15 ORF8710 - 2.4 6.8 11.9 2.9 6.6 11.9 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Presenilin PF01080.17 ORF8710 - 3 6.5 8.1 3.3 6.4 8.1 1.2 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 ORF8710 - 3.6 5.8 21.5 4.1 5.6 21.5 1.1 1 0 0 1 1 1 0 CDC45-like protein V_ATPase_I PF01496.19 ORF8710 - 3.9 5.3 6.8 4.8 5.0 6.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family SLC12 PF03522.15 ORF8710 - 4 6.4 10.9 4.7 6.1 10.9 1.1 1 0 0 1 1 1 0 Solute carrier family 12 zf-RING_2 PF13639.6 ORF83955 - 1e-10 41.8 8.4 2e-10 40.8 8.4 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF83955 - 6.7e-09 35.5 5.1 1.2e-08 34.7 5.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF83955 - 5.2e-08 32.6 7.3 8.4e-08 32.0 7.3 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF83955 - 3.7e-07 30.1 1.3 1.4e-06 28.2 0.5 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF83955 - 6.2e-07 29.3 6.8 1.1e-06 28.5 6.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF83955 - 7e-07 29.0 6.0 1.3e-06 28.1 6.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF83955 - 2.8e-05 23.8 6.2 7.9e-05 22.3 6.2 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF83955 - 8.4e-05 22.3 8.0 0.00018 21.2 8.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF83955 - 0.0015 18.8 5.9 0.0028 17.9 5.9 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF83955 - 0.0064 16.6 11.3 0.019 15.1 10.2 2.3 2 1 1 3 3 3 1 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF83955 - 0.012 15.7 5.3 0.021 14.9 5.3 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_4 PF14570.6 ORF83955 - 0.024 14.5 5.1 0.052 13.4 5.1 1.6 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF1772 PF08592.11 ORF83955 - 0.033 14.5 0.0 0.045 14.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) CopD PF05425.13 ORF83955 - 0.058 13.8 0.0 0.091 13.2 0.0 1.2 1 0 0 1 1 1 0 Copper resistance protein D Baculo_IE-1 PF05290.11 ORF83955 - 0.38 10.7 3.4 0.51 10.3 3.4 1.2 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) Arm PF00514.23 ORF8369 - 0.0012 18.8 13.9 0.45 10.6 0.1 4.4 5 0 0 5 5 5 3 Armadillo/beta-catenin-like repeat DUF2996 PF11210.8 ORF8369 - 0.12 12.8 0.0 0.45 11.0 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2996) Atx10homo_assoc PF09759.9 ORF8369 - 0.13 12.3 2.7 9.7 6.3 0.0 2.4 1 1 1 2 2 2 0 Spinocerebellar ataxia type 10 protein domain UME PF08064.13 ORF8369 - 0.53 10.2 4.7 0.58 10.1 1.0 2.8 1 1 1 2 2 2 0 UME (NUC010) domain Eapp_C PF10238.9 ORF8369 - 1.3 9.1 4.7 1.6 8.8 4.2 1.6 1 1 0 1 1 1 0 E2F-associated phosphoprotein HEAT PF02985.22 ORF8369 - 8.7 6.9 10.2 23 5.6 0.1 4.1 4 0 0 4 4 4 0 HEAT repeat GST_C_3 PF14497.6 ORF79605 - 6.1e-16 58.4 0.0 1.2e-15 57.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF79605 - 7.6e-08 32.5 0.0 1.8e-07 31.3 0.0 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF79605 - 3.8e-07 30.0 1.0 2.9e-06 27.2 0.1 2.5 3 0 0 3 3 3 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF79605 - 7.7e-05 23.0 0.0 0.00013 22.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF79605 - 0.0046 17.3 0.0 0.0077 16.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF79605 - 0.026 14.3 0.0 0.051 13.4 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Ribosomal_L29 PF00831.23 ORF79131 - 0.18 11.8 2.7 0.22 11.5 0.3 2.2 2 0 0 2 2 2 0 Ribosomal L29 protein Methyltransf_21 PF05050.12 ORF78568 - 1.1e-10 41.9 0.0 1.4e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain Methyltransf_23 PF13489.6 ORF78568 - 0.006 16.4 0.0 0.014 15.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Mito_carr PF00153.27 ORF76843 - 2e-22 78.9 0.8 2.4e-12 46.6 0.0 2.6 3 0 0 3 3 3 2 Mitochondrial carrier protein COX7C PF02935.16 ORF76843 - 0.0045 17.2 1.0 0.022 15.0 1.2 2.0 2 0 0 2 2 2 1 Cytochrome c oxidase subunit VIIc C1_2 PF03107.16 ORF76731 - 3.8e-05 23.9 11.2 0.00014 22.1 8.2 2.3 2 0 0 2 2 2 1 C1 domain C1_1 PF00130.22 ORF76731 - 0.0011 18.8 7.9 0.038 13.9 4.9 2.3 2 0 0 2 2 2 2 Phorbol esters/diacylglycerol binding domain (C1 domain) ZZ PF00569.17 ORF76731 - 0.11 12.3 5.0 0.24 11.2 5.0 1.6 1 0 0 1 1 1 0 Zinc finger, ZZ type zf-RING_4 PF14570.6 ORF76731 - 0.16 11.8 11.6 0.76 9.6 11.7 2.2 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain FYVE PF01363.21 ORF76731 - 0.18 11.9 6.4 0.32 11.2 6.4 1.5 1 0 0 1 1 1 0 FYVE zinc finger PHD PF00628.29 ORF76731 - 1 9.3 11.0 5.3 7.0 11.0 2.1 1 1 0 1 1 1 0 PHD-finger zf-met PF12874.7 ORF76731 - 5.4 7.5 7.3 7.4 7.1 0.0 3.5 4 0 0 4 4 4 0 Zinc-finger of C2H2 type zf-RanBP PF00641.18 ORF7591 - 9.5e-06 24.8 27.0 3.9e-05 22.9 7.2 3.5 3 0 0 3 3 3 2 Zn-finger in Ran binding protein and others DZR PF12773.7 ORF7591 - 0.0032 17.5 25.1 0.07 13.2 13.3 2.8 1 1 1 2 2 2 2 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF7591 - 3 7.4 13.8 8.1 6.0 2.2 3.7 2 1 1 3 3 3 0 zinc-ribbon domain NIF PF03031.18 ORF75054 - 2.1e-33 115.3 0.0 2.8e-33 114.9 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Herpes_U5 PF05999.11 ORF75054 - 0.11 11.3 0.2 0.25 10.1 0.2 1.5 1 1 0 1 1 1 0 Herpesvirus U5-like family TINF2_N PF14973.6 ORF73488 - 0.045 14.1 3.5 0.072 13.4 3.5 1.3 1 0 0 1 1 1 0 TERF1-interacting nuclear factor 2 N-terminus DUF87 PF01935.17 ORF73488 - 0.2 11.7 5.2 0.28 11.3 5.2 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain DUF724 PF05266.14 ORF73488 - 0.33 10.8 9.6 0.48 10.2 9.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Herpes_UL6 PF01763.16 ORF73488 - 0.81 8.1 6.6 1.1 7.7 6.6 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like DUF4164 PF13747.6 ORF73488 - 1.3 9.3 10.6 0.38 11.1 5.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) DUF1664 PF07889.12 ORF73488 - 2 8.5 7.6 0.4 10.7 4.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) START PF01852.19 ORF72336 - 2e-09 37.2 0.0 2.3e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 START domain Ntox28 PF15605.6 ORF72336 - 0.14 12.4 0.0 0.35 11.1 0.0 1.7 1 0 0 1 1 1 0 Bacterial toxin 28 RCC1_2 PF13540.6 ORF71719 - 2e-11 43.4 12.4 0.13 12.1 0.1 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF71719 - 2.6e-05 24.4 4.4 3.9 7.5 0.0 4.9 2 2 1 3 3 3 2 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 ORF71719 - 0.00018 21.9 1.2 24 5.5 0.0 5.0 4 2 1 5 5 5 1 Spectrin repeat FtsQ PF03799.15 ORF71719 - 0.0002 22.2 0.1 5.4 7.9 0.0 4.0 1 1 4 5 5 5 1 Cell division protein FtsQ SIS_2 PF13580.6 ORF71719 - 3.3 7.7 9.9 8.5 6.4 0.2 4.1 1 1 4 5 5 5 0 SIS domain Methyltransf_25 PF13649.6 ORF71664 - 3.9e-13 49.9 0.0 1e-12 48.6 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF71664 - 6.5e-12 45.5 0.0 1e-11 44.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF71664 - 1.2e-10 41.5 0.0 1.5e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF71664 - 2e-09 37.9 0.0 4.3e-09 36.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF71664 - 1.7e-08 35.1 0.0 3.7e-08 34.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF71664 - 1.8e-06 27.5 0.0 2.7e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF71664 - 0.0002 21.3 0.0 0.00039 20.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF71664 - 0.00021 20.9 0.0 0.00037 20.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF71664 - 0.00031 20.8 0.0 0.00056 19.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF71664 - 0.0013 18.4 0.0 0.0031 17.1 0.0 1.6 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW CMAS PF02353.20 ORF71664 - 0.003 16.9 0.0 0.0081 15.5 0.0 1.7 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.11 ORF71664 - 0.0041 16.1 0.0 0.0072 15.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) RrnaAD PF00398.20 ORF71664 - 0.0062 15.6 0.0 0.011 14.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase AdoMet_MTase PF07757.13 ORF71664 - 0.0068 16.7 0.2 0.084 13.2 0.1 2.4 1 1 0 2 2 2 1 Predicted AdoMet-dependent methyltransferase PrmA PF06325.13 ORF71664 - 0.015 14.7 0.0 0.024 14.1 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DOT1 PF08123.13 ORF71664 - 0.017 14.7 0.0 0.027 14.0 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 PCMT PF01135.19 ORF71664 - 0.051 13.3 0.0 0.091 12.5 0.0 1.4 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N6_N4_Mtase PF01555.18 ORF71664 - 0.074 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 DNA methylase His_Phos_2 PF00328.22 ORF71664 - 0.081 12.3 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) TrkA_N PF02254.18 ORF71664 - 0.13 12.5 0.0 0.28 11.5 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain KASH_CCD PF14662.6 ORF6912 - 0.0056 16.5 8.2 0.0096 15.8 8.2 1.5 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH ZapB PF06005.12 ORF6912 - 0.015 15.7 4.1 0.015 15.7 4.1 2.2 3 0 0 3 3 3 0 Cell division protein ZapB eIF3_N PF09440.10 ORF6912 - 0.051 14.0 9.2 0.68 10.4 1.6 2.3 1 1 1 2 2 2 0 eIF3 subunit 6 N terminal domain NICE-3 PF07406.11 ORF6912 - 0.052 13.5 0.9 0.09 12.8 0.9 1.4 1 0 0 1 1 1 0 NICE-3 protein TMCO5 PF14992.6 ORF6912 - 0.29 10.7 11.7 0.18 11.4 8.8 2.0 1 1 1 2 2 2 0 TMCO5 family CENP-H PF05837.12 ORF6912 - 1.5 9.2 8.9 0.4 11.1 5.2 2.0 2 1 0 2 2 2 0 Centromere protein H (CENP-H) Efg1 PF10153.9 ORF6912 - 3.6 8.0 11.2 1.6 9.1 0.3 2.2 2 0 0 2 2 2 0 rRNA-processing protein Efg1 DUF1298 PF06974.13 ORF66661 - 2.6e-09 37.2 0.0 3.6e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Abhydrolase_2 PF02230.16 ORF66607 - 8.3e-36 123.8 0.0 1.1e-35 123.4 0.0 1.2 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Esterase PF00756.20 ORF66607 - 2.9e-05 23.9 0.0 4e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 ORF66607 - 9.2e-05 21.8 0.1 0.0032 16.8 0.1 2.3 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF66607 - 0.00012 22.8 1.9 0.00022 21.9 2.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 ORF66607 - 0.00014 21.5 0.0 0.00018 21.1 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Esterase_phd PF10503.9 ORF66607 - 0.0014 18.1 0.1 0.0025 17.3 0.1 1.4 1 0 0 1 1 1 1 Esterase PHB depolymerase Lipase_3 PF01764.25 ORF66607 - 0.0039 17.0 0.0 0.0064 16.4 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) FSH1 PF03959.13 ORF66607 - 0.01 15.5 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_1 PF00561.20 ORF66607 - 0.049 13.3 0.0 0.054 13.1 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Cutinase PF01083.22 ORF66607 - 0.091 12.7 0.1 0.27 11.2 0.0 1.7 2 0 0 2 2 2 0 Cutinase Peptidase_S9 PF00326.21 ORF66607 - 0.11 11.9 0.7 1.2 8.6 0.2 2.1 2 0 0 2 2 2 0 Prolyl oligopeptidase family DUF2974 PF11187.8 ORF66607 - 0.18 11.3 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) AXE1 PF05448.12 ORF66607 - 0.2 10.3 0.0 0.26 9.9 0.0 1.2 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) NAD_binding_10 PF13460.6 ORF59128 - 3.1e-13 50.0 0.0 4e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 ORF59128 - 1.1e-07 32.4 0.0 4.5e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NmrA PF05368.13 ORF59128 - 2.5e-05 24.0 0.0 3.5e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 ORF59128 - 4.6e-05 22.6 0.0 5.9e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family HIM1 PF08732.10 ORF59128 - 0.00018 21.0 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 HIM1 Epimerase PF01370.21 ORF59128 - 0.00036 20.1 0.0 0.00051 19.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DapB_N PF01113.20 ORF59128 - 0.00092 19.3 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 ORF59128 - 0.0087 16.3 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Polysacc_synt_2 PF02719.15 ORF59128 - 0.049 12.8 0.0 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein BAH PF01426.18 ORF59128 - 0.15 11.9 0.2 0.24 11.2 0.2 1.3 1 0 0 1 1 1 0 BAH domain NAD_binding_4 PF07993.12 ORF59128 - 0.17 11.0 0.0 0.35 10.0 0.0 1.5 2 0 0 2 2 2 0 Male sterility protein TPR_19 PF14559.6 ORF57701 - 4.5e-05 23.9 4.1 0.00041 20.8 1.7 2.7 2 1 0 2 2 2 1 Tetratricopeptide repeat FIST_C PF10442.9 ORF57701 - 5.5e-05 23.2 0.1 0.00016 21.7 0.0 1.9 2 0 0 2 2 2 1 FIST C domain TPR_2 PF07719.17 ORF57701 - 0.00031 20.6 4.2 0.053 13.7 0.1 3.5 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF57701 - 0.0021 18.7 0.9 0.0021 18.7 0.9 4.1 4 1 1 5 5 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF57701 - 0.007 16.6 3.2 0.013 15.8 0.2 2.7 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF57701 - 0.019 14.7 0.4 7.1 6.4 0.0 2.3 2 0 0 2 2 2 0 TPR repeat TPR_1 PF00515.28 ORF57701 - 0.027 14.3 2.6 0.15 11.9 0.1 2.7 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF57701 - 0.04 14.1 1.2 0.49 10.7 0.1 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF57701 - 0.04 14.0 0.0 0.097 12.8 0.0 1.6 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 ORF57701 - 0.041 13.8 0.5 0.39 10.6 0.1 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF57701 - 0.067 13.8 10.6 0.47 11.1 2.1 3.1 2 1 1 3 3 3 0 Tetratricopeptide repeat BTAD PF03704.17 ORF57701 - 0.073 13.5 8.5 0.31 11.5 4.4 3.0 2 1 0 2 2 2 0 Bacterial transcriptional activator domain HemY_N PF07219.13 ORF57701 - 0.075 13.2 3.8 5.6 7.2 0.3 2.5 1 1 1 2 2 2 0 HemY protein N-terminus DUF3856 PF12968.7 ORF57701 - 0.13 12.3 1.1 1.7 8.7 1.1 2.3 1 1 0 1 1 1 0 Domain of Unknown Function (DUF3856) TPR_9 PF13371.6 ORF57701 - 2.7 8.2 9.0 3.5 7.8 4.1 3.0 2 1 0 2 2 2 0 Tetratricopeptide repeat Met_synt_B12 PF02965.17 ORF56693 - 0.011 15.2 0.1 0.016 14.7 0.1 1.2 1 0 0 1 1 1 0 Vitamin B12 dependent methionine synthase, activation domain Glyco_hydro_3_C PF01915.22 ORF55743 - 9e-12 45.4 0.1 1.2e-11 44.9 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 ORF55743 - 8.8e-05 22.5 0.0 0.00019 21.5 0.0 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain Activator_LAG-3 PF11498.8 ORF53804 - 0.00025 20.2 19.1 0.00032 19.8 19.1 1.3 1 0 0 1 1 1 1 Transcriptional activator LAG-3 TFIIA PF03153.13 ORF53804 - 0.13 12.2 16.5 0.19 11.7 16.5 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Beta-lactamase PF00144.24 ORF53804 - 0.13 11.5 1.4 0.18 11.0 1.4 1.2 1 0 0 1 1 1 0 Beta-lactamase DUF737 PF05300.11 ORF53804 - 0.27 11.6 9.4 0.39 11.0 9.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF737) DUF4199 PF13858.6 ORF53804 - 3.8 7.9 7.8 5.2 7.4 7.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) DUF945 PF06097.11 ORF53804 - 4 6.4 14.8 5 6.1 14.8 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF945) TauE PF01925.19 ORF51939 - 3.3e-12 46.6 13.4 4.1e-12 46.3 13.4 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DHHC PF01529.20 ORF51939 - 6.1 7.0 10.2 18 5.4 4.7 2.3 1 1 1 2 2 2 0 DHHC palmitoyltransferase DUF2964 PF11177.8 ORF51939 - 7.9 6.8 7.2 0.53 10.5 0.9 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2964) SCAMP PF04144.13 ORF49559 - 2.5e-09 37.7 12.1 3.1e-09 37.4 12.1 1.0 1 0 0 1 1 1 1 SCAMP family DSPc PF00782.20 ORF49415 - 5.1e-25 87.8 0.0 6.8e-25 87.4 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF49415 - 0.025 14.2 0.0 0.032 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase G2F PF07474.12 ORF49104 - 0.036 13.9 1.6 0.05 13.4 1.0 1.6 1 1 1 2 2 2 0 G2F domain Abhydrolase_2 PF02230.16 ORF48538 - 5.9e-21 75.3 0.0 7.4e-21 74.9 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase STI1 PF17830.1 ORF48538 - 1.9e-08 34.1 0.9 4.1e-08 33.0 0.9 1.5 1 0 0 1 1 1 1 STI1 domain DLH PF01738.18 ORF48538 - 8.2e-05 22.3 0.0 0.00012 21.7 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF48538 - 0.0019 17.7 0.0 0.0027 17.2 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family FSH1 PF03959.13 ORF48538 - 0.006 16.3 0.0 0.0093 15.6 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Hydrolase_4 PF12146.8 ORF48538 - 0.014 14.6 0.1 0.055 12.7 0.0 1.8 1 1 1 2 2 2 0 Serine aminopeptidase, S33 Esterase_phd PF10503.9 ORF48538 - 0.04 13.4 0.3 1.8 8.0 0.0 2.2 1 1 1 2 2 2 0 Esterase PHB depolymerase Abhydrolase_4 PF08386.10 ORF48538 - 0.075 13.2 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein DUF4903 PF16246.5 ORF47247 - 0.094 12.3 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4903) Lipase_3 PF01764.25 ORF46553 - 2.6e-31 108.4 0.0 3.4e-31 108.0 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF46553 - 0.0016 17.7 0.0 0.0025 17.1 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF46553 - 0.0058 16.2 0.1 0.022 14.3 0.1 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2974) Cutinase PF01083.22 ORF46553 - 0.016 15.2 0.0 0.03 14.3 0.0 1.4 1 0 0 1 1 1 0 Cutinase Abhydrolase_6 PF12697.7 ORF46553 - 0.065 13.8 0.0 0.12 13.0 0.0 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF676 PF05057.14 ORF46553 - 0.14 11.6 0.1 0.43 10.0 0.0 1.7 2 0 0 2 2 2 0 Putative serine esterase (DUF676) NUDIX PF00293.28 ORF44689 - 1.5e-11 44.5 0.3 2.4e-11 43.8 0.3 1.2 1 0 0 1 1 1 1 NUDIX domain DSPc PF00782.20 ORF42672 - 5.1e-25 87.8 0.0 6.8e-25 87.4 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF42672 - 0.025 14.2 0.0 0.032 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase HMG_box_2 PF09011.10 ORF4212 - 0.0066 17.0 5.9 0.014 16.0 5.9 1.5 1 0 0 1 1 1 1 HMG-box domain HMG_box PF00505.19 ORF4212 - 0.12 12.8 6.0 0.27 11.7 6.0 1.6 1 0 0 1 1 1 0 HMG (high mobility group) box Peptidase_C71 PF12386.8 ORF4212 - 0.26 10.9 2.5 1 9.0 0.3 2.1 1 1 0 2 2 2 0 Pseudomurein endo-isopeptidase Pei Methyltransf_25 PF13649.6 ORF41957 - 4.3e-13 49.8 0.0 1e-12 48.6 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF41957 - 6.7e-12 45.5 0.0 1e-11 44.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF41957 - 1.2e-10 41.5 0.0 1.5e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF41957 - 2.1e-09 37.9 0.0 4.3e-09 36.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF41957 - 1.7e-08 35.1 0.0 3.7e-08 34.0 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF41957 - 1.8e-06 27.5 0.0 2.7e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF41957 - 0.00019 21.4 0.0 0.00037 20.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF41957 - 0.00021 20.9 0.0 0.00037 20.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF41957 - 0.00032 20.7 0.0 0.00056 19.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF41957 - 0.0013 18.4 0.0 0.0031 17.1 0.0 1.6 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW CMAS PF02353.20 ORF41957 - 0.0034 16.7 0.0 0.0085 15.4 0.0 1.6 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.11 ORF41957 - 0.0044 16.0 0.0 0.0077 15.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) RrnaAD PF00398.20 ORF41957 - 0.0064 15.6 0.0 0.011 14.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase AdoMet_MTase PF07757.13 ORF41957 - 0.0066 16.8 0.2 0.078 13.3 0.1 2.4 1 1 0 2 2 2 1 Predicted AdoMet-dependent methyltransferase PrmA PF06325.13 ORF41957 - 0.016 14.6 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DOT1 PF08123.13 ORF41957 - 0.017 14.6 0.0 0.027 14.0 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 PCMT PF01135.19 ORF41957 - 0.043 13.6 0.0 0.072 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N6_N4_Mtase PF01555.18 ORF41957 - 0.073 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 DNA methylase His_Phos_2 PF00328.22 ORF41957 - 0.082 12.2 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) TrkA_N PF02254.18 ORF41957 - 0.14 12.5 0.0 0.28 11.5 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain zinc_ribbon_6 PF14599.6 ORF40744 - 0.072 13.1 4.3 3.4 7.8 0.6 2.4 1 1 1 2 2 2 0 Zinc-ribbon RCC1_2 PF13540.6 ORF40558 - 0.00022 20.9 22.0 1.5 8.7 0.7 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF40558 - 0.0018 18.4 1.7 25 4.9 0.3 4.7 4 1 0 4 4 4 1 Uncharacterised ACR, YagE family COG1723 DUF1120 PF06551.12 ORF40558 - 0.025 14.7 8.9 0.47 10.6 0.1 4.0 1 1 3 4 4 4 0 Protein of unknown function (DUF1120) UPF0113 PF03657.13 ORF38869 - 3.6e-23 81.6 0.0 6.7e-23 80.7 0.0 1.5 1 0 0 1 1 1 1 UPF0113 PUA domain UPF0113_N PF17833.1 ORF38869 - 1.2e-22 80.2 0.1 2.4e-22 79.3 0.1 1.5 1 0 0 1 1 1 1 UPF0113 Pre-PUA domain tRNA-synt_2 PF00152.20 ORF38869 - 7.6e-06 25.2 0.1 3.9e-05 22.9 0.0 1.7 1 1 1 2 2 2 1 tRNA synthetases class II (D, K and N) PP1 PF07430.11 ORF38869 - 0.1 12.7 0.3 0.27 11.3 0.1 1.8 1 1 0 1 1 1 0 Phloem filament protein PP1 cystatin-like domain DUF2306 PF10067.9 ORF36647 - 7.3e-13 49.0 4.1 1e-12 48.5 4.1 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2306) DUF1282 PF06930.12 ORF36647 - 0.021 14.6 2.6 0.041 13.6 2.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1282) DUF420 PF04238.12 ORF36647 - 0.037 14.3 10.4 1.1 9.5 0.7 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF420) CBP_BcsF PF11120.8 ORF36647 - 0.041 14.0 0.0 0.14 12.3 0.0 2.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF DCA16 PF15349.6 ORF36647 - 0.05 13.1 0.8 0.069 12.7 0.8 1.1 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 MerC PF03203.14 ORF36647 - 0.07 13.6 2.4 0.23 11.9 2.4 2.1 1 1 0 1 1 1 0 MerC mercury resistance protein UPF0542 PF15086.6 ORF36647 - 0.26 11.2 3.7 7.7 6.5 0.7 3.3 2 1 1 3 3 3 0 Uncharacterised protein family UPF0542 L-fibroin PF05849.11 ORF36277 - 0.063 12.6 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 Fibroin light chain (L-fibroin) Phage_1_1 PF08200.11 ORF36177 - 0.2 12.1 2.2 0.42 11.1 2.2 1.5 1 0 0 1 1 1 0 Bacteriophage 1.1 Protein NAD_binding_10 PF13460.6 ORF34219 - 3.1e-13 50.0 0.0 4e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 ORF34219 - 1.1e-07 32.4 0.0 4.5e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NmrA PF05368.13 ORF34219 - 2.5e-05 24.0 0.0 3.5e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 ORF34219 - 4.6e-05 22.6 0.0 5.9e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family HIM1 PF08732.10 ORF34219 - 0.00018 21.0 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 HIM1 Epimerase PF01370.21 ORF34219 - 0.00036 20.1 0.0 0.00051 19.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DapB_N PF01113.20 ORF34219 - 0.00092 19.3 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 ORF34219 - 0.0087 16.3 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Polysacc_synt_2 PF02719.15 ORF34219 - 0.049 12.8 0.0 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein BAH PF01426.18 ORF34219 - 0.15 11.9 0.2 0.24 11.2 0.2 1.3 1 0 0 1 1 1 0 BAH domain NAD_binding_4 PF07993.12 ORF34219 - 0.17 11.0 0.0 0.35 10.0 0.0 1.5 2 0 0 2 2 2 0 Male sterility protein Ras PF00071.22 ORF33262 - 4e-57 192.3 0.5 4.8e-57 192.1 0.5 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF33262 - 2.3e-34 118.2 0.1 4.1e-34 117.4 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF33262 - 2.1e-13 50.1 0.0 2.8e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF33262 - 3.6e-05 23.7 0.1 0.083 12.8 0.0 2.3 2 1 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 ORF33262 - 4.3e-05 23.1 0.0 0.00041 20.0 0.0 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF33262 - 7.8e-05 22.2 0.0 0.00021 20.8 0.0 1.7 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF33262 - 0.00013 21.4 0.0 0.00016 21.1 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF33262 - 0.00015 21.8 0.0 0.00023 21.2 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF33262 - 0.00041 19.9 0.0 0.38 10.3 0.0 2.4 2 0 0 2 2 2 2 Ferrous iron transport protein B PduV-EutP PF10662.9 ORF33262 - 0.0084 15.9 0.1 0.041 13.6 0.1 1.9 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation Pinin_SDK_N PF04697.13 ORF33262 - 0.011 16.4 0.4 0.023 15.3 0.2 1.6 1 1 0 1 1 1 0 pinin/SDK conserved region Dynamin_N PF00350.23 ORF33262 - 0.09 12.8 0.0 0.23 11.5 0.0 1.7 1 0 0 1 1 1 0 Dynamin family Biotin_carb_C PF02785.19 ORF33262 - 0.12 12.5 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Biotin carboxylase C-terminal domain AAA_7 PF12775.7 ORF33262 - 0.13 11.8 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AEP1 PF17049.5 ORF33262 - 0.23 10.5 0.0 0.33 10.0 0.0 1.1 1 0 0 1 1 1 0 ATPase expression protein 1 PPR_2 PF13041.6 ORF33222 - 0.00018 21.7 0.0 0.57 10.4 0.0 3.3 1 1 3 4 4 4 3 PPR repeat family PPR_3 PF13812.6 ORF33222 - 0.045 13.8 0.0 3.8 7.7 0.0 3.1 2 1 0 2 2 2 0 Pentatricopeptide repeat domain CagY_M PF07337.11 ORF32962 - 0.034 13.8 0.0 0.055 13.1 0.0 1.3 1 0 0 1 1 1 0 DC-EC Repeat Aldo_ket_red PF00248.21 ORF30231 - 3.4e-12 46.2 0.0 6e-12 45.3 0.0 1.4 1 1 0 1 1 1 1 Aldo/keto reductase family TetR_C_32 PF09209.11 ORF26583 - 2.1e-37 127.9 0.8 4.2e-37 126.9 0.5 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 ORF26583 - 2.3e-14 52.9 2.6 9.4e-14 50.9 0.7 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Metal_resist PF13801.6 ORF26583 - 0.001 19.2 0.3 0.0025 18.0 0.3 1.6 1 0 0 1 1 1 1 Heavy-metal resistance PAS_11 PF14598.6 ORF26583 - 0.13 12.4 0.1 0.25 11.5 0.1 1.6 1 1 0 1 1 1 0 PAS domain Interfer-bind PF09294.10 ORF23787 - 0.075 13.4 0.1 0.17 12.2 0.1 1.6 1 0 0 1 1 1 0 Interferon-alpha/beta receptor, fibronectin type III SelR PF01641.18 ORF23727 - 0.18 11.9 0.0 0.3 11.2 0.0 1.3 1 0 0 1 1 1 0 SelR domain DLH PF01738.18 ORF23220 - 2.5e-16 59.9 0.0 4.8e-16 59.0 0.0 1.4 1 1 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF23220 - 0.00086 18.8 0.0 0.0013 18.3 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family G2F PF07474.12 ORF23122 - 0.036 13.9 1.6 0.05 13.4 1.0 1.6 1 1 1 2 2 2 0 G2F domain Hydrolase_4 PF12146.8 ORF20663 - 4.2e-07 29.5 0.0 2.7e-06 26.8 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF20663 - 3.7e-06 26.8 0.0 0.074 12.7 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF20663 - 9.8e-06 26.3 0.1 1.6e-05 25.6 0.1 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF20663 - 0.01 15.4 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_4 PF08386.10 ORF20663 - 0.1 12.7 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein Esterase_phd PF10503.9 ORF20663 - 0.1 12.0 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 Esterase PHB depolymerase Peripla_BP_6 PF13458.6 ORF20663 - 0.11 12.2 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Periplasmic binding protein PARP PF00644.20 ORF20380 - 5.5e-09 35.9 0.2 6.3e-07 29.2 0.2 2.3 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DUF2767 PF10965.8 ORF20380 - 0.04 13.9 0.4 0.11 12.5 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2767) CRAL_TRIO PF00650.20 ORF18709 - 0.02 14.6 0.0 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 CRAL/TRIO domain DUF5473 PF17567.2 ORF18709 - 0.024 14.9 0.4 0.046 14.0 0.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5473) NAD_binding_10 PF13460.6 ORF12574 - 3.1e-13 50.0 0.0 4e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 ORF12574 - 1.1e-07 32.4 0.0 4.5e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NmrA PF05368.13 ORF12574 - 2.5e-05 24.0 0.0 3.5e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 ORF12574 - 4.6e-05 22.6 0.0 5.9e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family HIM1 PF08732.10 ORF12574 - 0.00018 21.0 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 HIM1 Epimerase PF01370.21 ORF12574 - 0.00036 20.1 0.0 0.00051 19.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DapB_N PF01113.20 ORF12574 - 0.00092 19.3 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 ORF12574 - 0.0087 16.3 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Polysacc_synt_2 PF02719.15 ORF12574 - 0.049 12.8 0.0 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein BAH PF01426.18 ORF12574 - 0.15 11.9 0.2 0.24 11.2 0.2 1.3 1 0 0 1 1 1 0 BAH domain NAD_binding_4 PF07993.12 ORF12574 - 0.17 11.0 0.0 0.35 10.0 0.0 1.5 2 0 0 2 2 2 0 Male sterility protein Bax1-I PF01027.20 ORF112340 - 3.5e-34 118.5 24.5 4e-34 118.3 24.5 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Abhydrolase_6 PF12697.7 ORF107391 - 3.6e-08 34.3 4.0 7.2e-08 33.3 4.0 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF107391 - 5.1e-06 25.9 0.0 2.8e-05 23.5 0.0 1.8 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Lipase_3 PF01764.25 ORF107391 - 0.00023 21.1 0.0 0.00029 20.7 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_1 PF00561.20 ORF107391 - 0.00042 20.0 0.0 0.0066 16.1 0.0 2.0 2 0 0 2 2 2 1 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF107391 - 0.00074 19.7 0.1 0.001 19.2 0.1 1.2 1 0 0 1 1 1 1 Thioesterase domain DUF900 PF05990.12 ORF107391 - 0.001 18.7 0.0 0.0014 18.1 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_2 PF02230.16 ORF107391 - 0.053 13.3 0.0 0.3 10.9 0.0 1.9 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase DUF1057 PF06342.12 ORF107391 - 0.063 12.3 0.0 0.082 11.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Lipase PF00151.19 ORF107391 - 0.26 10.5 0.1 0.37 10.0 0.1 1.1 1 0 0 1 1 1 0 Lipase MORN PF02493.20 ORF107330 - 8e-14 50.6 24.8 1e-06 28.3 0.7 4.6 4 0 0 4 4 4 4 MORN repeat SHIPPO-rpt PF07004.12 ORF106688 - 3.7 8.6 9.0 0.27 12.2 1.5 2.9 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat WASH-7_C PF14746.6 ORF10665 - 0.065 12.9 0.6 0.11 12.2 0.6 1.4 1 0 0 1 1 1 0 WASH complex subunit 7, C-terminal Nramp PF01566.18 ORF105627 - 5.6e-65 219.7 12.6 5.6e-65 219.7 12.6 1.3 2 0 0 2 2 2 1 Natural resistance-associated macrophage protein DUF983 PF06170.12 ORF105627 - 4.6 7.7 9.7 1.8 9.0 1.3 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF983) Pribosyltran PF00156.27 ORF103310 - 2e-08 33.9 0.0 3.5e-08 33.1 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 ORF103310 - 0.058 12.9 0.0 0.097 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase hnRNP_Q_AcD PF18360.1 ORF103310 - 0.068 13.1 0.1 0.14 12.2 0.1 1.6 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain Fib_alpha PF08702.10 NODE_32185_length_676_cov_153.722309_g25531_i0reverse_frame_1 - 0.61 10.3 3.3 4.9 7.3 1.1 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Kelch_4 PF13418.6 NODE_32178_length_676_cov_272.466459_g25524_i0reverse_frame_1 - 1e-06 28.6 1.1 0.064 13.3 0.0 3.0 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_32178_length_676_cov_272.466459_g25524_i0reverse_frame_1 - 1.3e-06 28.5 3.7 0.021 15.1 0.2 3.3 2 1 1 3 3 3 2 Kelch motif Kelch_5 PF13854.6 NODE_32178_length_676_cov_272.466459_g25524_i0reverse_frame_1 - 1.5e-05 24.8 3.3 0.011 15.7 0.1 3.1 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 NODE_32178_length_676_cov_272.466459_g25524_i0reverse_frame_1 - 2.8e-05 24.3 0.2 1.2 9.5 0.0 3.8 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_32178_length_676_cov_272.466459_g25524_i0reverse_frame_1 - 7.7e-05 22.2 4.0 0.003 17.1 0.1 3.3 3 0 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 NODE_32178_length_676_cov_272.466459_g25524_i0reverse_frame_1 - 0.01 15.8 2.1 2.3 8.4 0.1 2.7 1 1 1 2 2 2 0 Kelch motif Raffinose_syn PF05691.12 NODE_32178_length_676_cov_272.466459_g25524_i0reverse_frame_1 - 0.042 11.7 0.0 0.049 11.4 0.0 1.0 1 0 0 1 1 1 0 Raffinose synthase or seed imbibition protein Sip1 RskA PF10099.9 NODE_32162_length_677_cov_3.686916_g25511_i0reverse_frame_1 - 0.75 10.1 10.0 0.72 10.1 8.5 1.7 1 1 1 2 2 2 0 Anti-sigma-K factor rskA DRMBL PF07522.14 NODE_32159_length_677_cov_63.448598_g25508_i0reverse_frame_1 - 0.02 15.1 0.1 0.055 13.7 0.1 1.7 1 0 0 1 1 1 0 DNA repair metallo-beta-lactamase PH_8 PF15409.6 NODE_32159_length_677_cov_63.448598_g25508_i0reverse_frame_1 - 1.5 9.2 6.2 11 6.4 3.1 2.3 2 0 0 2 2 2 0 Pleckstrin homology domain HemY_N PF07219.13 NODE_32147_length_677_cov_144.895639_g25496_i0forward_frame_1 - 0.21 11.8 0.1 0.94 9.7 0.0 1.9 2 0 0 2 2 2 0 HemY protein N-terminus NS3_envE PF02723.14 NODE_32142_length_677_cov_304.607477_g25342_i1forward_frame_1 - 4.6 7.4 8.7 0.7 10.0 4.1 2.0 2 1 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E RCC1_2 PF13540.6 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 2.2e-06 27.3 21.4 1.1 9.2 0.8 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 0.01 16.0 2.5 24 4.9 0.2 4.2 3 2 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 PhnH PF05845.12 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 0.012 15.4 0.2 0.92 9.2 0.0 2.2 1 1 2 3 3 3 0 Bacterial phosphonate metabolism protein (PhnH) Capsule_synth PF05159.14 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 0.038 13.4 2.5 1.8 7.9 0.1 2.9 3 1 1 4 4 4 0 Capsule polysaccharide biosynthesis protein PheRS_DBD2 PF18554.1 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 3.5 7.7 20.8 23 5.1 1.0 5.2 5 0 0 5 5 5 0 PheRS DNA binding domain 2 RCC1_2 PF13540.6 NODE_32099_length_678_cov_303.743390_g25457_i0reverse_frame_1 - 2.2e-06 27.3 21.4 1.1 9.2 0.8 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat PhnH PF05845.12 NODE_32099_length_678_cov_303.743390_g25457_i0reverse_frame_1 - 0.012 15.4 0.2 0.91 9.2 0.0 2.2 1 1 2 3 3 3 0 Bacterial phosphonate metabolism protein (PhnH) DUF155 PF02582.14 NODE_32099_length_678_cov_303.743390_g25457_i0reverse_frame_1 - 0.018 15.1 2.9 24 4.9 0.2 4.2 3 2 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Capsule_synth PF05159.14 NODE_32099_length_678_cov_303.743390_g25457_i0reverse_frame_1 - 0.02 14.4 1.7 1.8 7.9 0.1 2.9 3 1 1 4 4 4 0 Capsule polysaccharide biosynthesis protein RINGv PF12906.7 NODE_32094_length_678_cov_394.258165_g25452_i0forward_frame_1 - 1.5e-13 50.6 6.3 2.6e-13 49.8 6.3 1.4 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 NODE_32094_length_678_cov_394.258165_g25452_i0forward_frame_1 - 0.00031 20.9 4.0 0.00061 19.9 4.0 1.5 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 NODE_32094_length_678_cov_394.258165_g25452_i0forward_frame_1 - 0.011 16.1 5.0 0.02 15.2 5.0 1.6 1 1 0 1 1 1 0 Ring finger domain DUF587 PF04532.12 NODE_32094_length_678_cov_394.258165_g25452_i0forward_frame_1 - 0.045 13.0 0.4 0.077 12.3 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF587) Transpos_assoc PF13963.6 NODE_32084_length_678_cov_4644.944012_g25446_i0reverse_frame_1 - 0.48 10.8 6.5 0.083 13.2 2.3 1.9 2 0 0 2 2 2 0 Transposase-associated domain tRNA_U5-meth_tr PF05958.11 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 5.3e-113 377.6 1.5 5.9e-113 377.5 1.5 1.0 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_25 PF13649.6 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 3.2e-06 27.7 0.1 8.5e-06 26.4 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_4 PF02390.17 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 3.9e-05 23.2 0.1 7.4e-05 22.3 0.1 1.4 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.00018 21.1 0.1 0.00031 20.3 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.00051 20.6 0.0 0.0011 19.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.00068 19.3 0.1 0.0011 18.6 0.1 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.00081 18.9 0.1 0.0014 18.1 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DUF3164 PF11363.8 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.0046 16.6 0.4 0.012 15.3 0.1 1.9 2 1 1 3 3 3 1 Protein of unknown function (DUF3164) Methyltransf_31 PF13847.6 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.0048 16.7 0.1 0.012 15.5 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Met_10 PF02475.16 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.01 15.6 0.1 0.017 14.8 0.1 1.3 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_15 PF09445.10 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.013 15.1 0.0 0.022 14.4 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Ins134_P3_kin_N PF17927.1 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.019 15.3 0.0 0.039 14.3 0.0 1.5 1 0 0 1 1 1 0 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain Methyltransf_12 PF08242.12 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.057 14.2 0.0 0.12 13.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain NodS PF05401.11 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.094 12.3 0.2 0.18 11.4 0.0 1.5 2 0 0 2 2 2 0 Nodulation protein S (NodS) DREV PF05219.12 NODE_32081_length_679_cov_4.037267_g25444_i0forward_frame_3 - 0.1 11.7 0.0 0.17 10.9 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase zf-RING_2 PF13639.6 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.00056 20.2 0.4 0.0009 19.5 0.4 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.012 15.4 0.3 0.024 14.4 0.3 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.013 15.3 0.1 0.022 14.6 0.1 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.014 15.6 0.6 0.022 14.9 0.6 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.049 13.5 1.3 0.16 11.8 1.3 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.053 13.4 0.2 0.092 12.6 0.2 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-UDP PF14569.6 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.093 12.9 0.3 0.28 11.3 0.3 1.8 1 1 0 1 1 1 0 Zinc-binding RING-finger Tmemb_9 PF05434.11 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.17 11.7 0.9 0.4 10.6 0.3 1.9 2 0 0 2 2 2 0 TMEM9 zf-RING_UBOX PF13445.6 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.24 11.5 1.0 0.46 10.5 1.0 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-Di19 PF05605.12 NODE_32059_length_679_cov_171.956522_g25424_i0forward_frame_3 - 0.26 11.6 1.1 1.8 8.9 0.1 2.2 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding vMSA PF00695.19 NODE_32058_length_679_cov_173.450311_g25423_i0reverse_frame_3 - 7.8 5.5 8.3 0.9 8.6 2.8 1.9 1 1 1 2 2 2 0 Major surface antigen from hepadnavirus FpoO PF10621.9 NODE_32032_length_680_cov_1.905426_g25405_i0reverse_frame_3 - 0.18 12.2 1.1 0.49 10.7 1.1 1.7 1 1 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO Suv3_N PF18114.1 NODE_32032_length_680_cov_1.905426_g25405_i0reverse_frame_2 - 0.064 13.4 0.0 0.23 11.6 0.0 1.7 1 1 1 2 2 2 0 Suv3 helical N-terminal domain DUF4211 PF13926.6 NODE_32032_length_680_cov_1.905426_g25405_i0forward_frame_2 - 0.18 11.8 0.1 0.27 11.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4211) ATPase PF06745.13 NODE_32031_length_680_cov_2.204651_g25404_i0reverse_frame_2 - 0.22 10.9 0.0 0.29 10.5 0.0 1.1 1 0 0 1 1 1 0 KaiC MASE1 PF05231.14 NODE_32030_length_680_cov_2.320930_g25403_i0forward_frame_2 - 4.9e-37 127.7 13.9 5.7e-37 127.5 13.9 1.0 1 0 0 1 1 1 1 MASE1 SK_channel PF03530.14 NODE_32030_length_680_cov_2.320930_g25403_i0forward_frame_2 - 0.81 9.7 8.6 1.5 8.8 2.8 2.6 2 1 0 2 2 2 0 Calcium-activated SK potassium channel DUF1296 PF06972.11 NODE_32024_length_680_cov_38.553488_g25397_i0reverse_frame_3 - 0.00095 19.3 0.3 0.026 14.7 0.1 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1296) Pam16 PF03656.13 NODE_32024_length_680_cov_38.553488_g25397_i0reverse_frame_3 - 0.019 15.0 2.1 0.019 15.0 2.1 1.6 2 0 0 2 2 2 0 Pam16 His_kinase PF06580.13 NODE_32021_length_680_cov_62.229457_g25394_i0reverse_frame_2 - 0.02 15.2 1.2 0.2 12.0 0.1 2.5 2 1 0 2 2 2 0 Histidine kinase MscL PF01741.18 NODE_32010_length_680_cov_103.448062_g25384_i0reverse_frame_3 - 0.039 14.2 0.3 0.09 13.1 0.0 1.7 1 1 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL Ion_trans PF00520.31 NODE_32010_length_680_cov_103.448062_g25384_i0reverse_frame_3 - 0.34 10.1 7.1 0.06 12.6 3.8 1.4 2 0 0 2 2 2 0 Ion transport protein SOP4 PF17081.5 NODE_32000_length_680_cov_183.500775_g25375_i0reverse_frame_2 - 0.12 11.8 0.8 0.64 9.5 0.1 2.0 2 0 0 2 2 2 0 Suppressor of PMA 1-7 protein RPA43_OB PF17875.1 NODE_32000_length_680_cov_183.500775_g25375_i0reverse_frame_2 - 0.21 12.2 0.5 0.35 11.5 0.1 1.5 2 0 0 2 2 2 0 RPA43 OB domain in RNA Pol I SAPS PF04499.15 NODE_31981_length_681_cov_29.882353_g25362_i0forward_frame_3 - 0.091 11.5 0.0 0.095 11.5 0.0 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein HCV_NS2 PF01538.18 NODE_31953_length_681_cov_545.286614_g25339_i0reverse_frame_2 - 0.054 13.1 0.1 0.077 12.7 0.1 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 Aldo_ket_red PF00248.21 ORF99729 - 1.1e-18 67.4 0.0 1.5e-18 67.0 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Ras PF00071.22 ORF99251 - 4.2e-05 23.2 8.6 0.0022 17.6 8.6 2.3 1 1 0 1 1 1 1 Ras family AAA_18 PF13238.6 ORF99251 - 0.00047 20.7 1.9 0.13 12.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain SRPRB PF09439.10 ORF99251 - 0.0012 18.3 0.6 0.0012 18.3 0.6 1.8 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit Arf PF00025.21 ORF99251 - 0.0032 16.9 5.7 0.0049 16.3 0.2 2.7 2 1 0 2 2 2 1 ADP-ribosylation factor family AAA_28 PF13521.6 ORF99251 - 0.011 16.0 0.3 0.023 14.9 0.0 1.8 2 1 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 ORF99251 - 0.013 15.2 2.5 0.02 14.6 0.7 2.1 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 ORF99251 - 0.017 15.3 4.6 0.14 12.4 2.9 2.6 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_14 PF13173.6 ORF99251 - 0.02 14.9 0.3 0.02 14.9 0.3 2.3 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.20 ORF99251 - 0.13 11.4 11.7 0.3 10.2 11.7 1.6 1 1 0 1 1 1 0 G-protein alpha subunit AAA_24 PF13479.6 ORF99251 - 0.43 10.3 7.4 5.2 6.7 7.1 2.4 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF99251 - 0.65 10.1 3.3 1.5 9.0 3.2 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase TMEM40 PF15817.5 ORF95591 - 0.025 14.3 0.9 0.034 13.9 0.1 1.6 2 0 0 2 2 2 0 Transmembrane protein 40 family Phage_H_T_join PF05521.11 ORF95591 - 0.038 14.5 0.1 0.062 13.8 0.1 1.3 1 0 0 1 1 1 0 Phage head-tail joining protein FAST_1 PF06743.15 ORF92855 - 0.12 12.3 0.2 3.8 7.5 0.1 2.4 1 1 1 2 2 2 0 FAST kinase-like protein, subdomain 1 DUF3960 PF13142.6 ORF92855 - 0.17 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3960) MIF PF01187.18 ORF92178 - 3.9e-28 98.0 0.0 5.2e-28 97.6 0.0 1.2 1 0 0 1 1 1 1 Macrophage migration inhibitory factor (MIF) Tautomerase PF01361.21 ORF92178 - 0.0016 18.3 0.0 0.08 12.9 0.0 2.2 2 0 0 2 2 2 1 Tautomerase enzyme PCYCGC PF13798.6 ORF92178 - 0.088 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function with PCYCGC motif Arf PF00025.21 ORF91057 - 1.4e-11 44.1 0.1 2.4e-11 43.4 0.1 1.5 1 1 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF91057 - 1.8e-06 27.5 1.7 3.2e-06 26.7 0.2 2.0 2 1 0 2 2 2 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 ORF91057 - 7.5e-06 26.0 0.2 2.2e-05 24.5 0.2 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 ORF91057 - 0.0011 19.1 0.1 0.031 14.5 0.1 2.3 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF91057 - 0.0049 16.7 0.0 0.83 9.4 0.0 2.1 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein G-alpha PF00503.20 ORF91057 - 0.0058 15.8 2.0 0.01 15.1 2.0 1.6 1 1 0 1 1 1 1 G-protein alpha subunit AAA_22 PF13401.6 ORF91057 - 0.0079 16.5 0.1 0.049 13.9 0.0 2.1 2 1 0 2 2 2 1 AAA domain FeoB_N PF02421.18 ORF91057 - 0.038 13.5 0.1 0.17 11.4 0.2 2.1 2 1 0 2 2 2 0 Ferrous iron transport protein B Ras PF00071.22 ORF91057 - 0.091 12.4 0.0 0.29 10.7 0.0 2.0 2 1 0 2 2 2 0 Ras family AAA_18 PF13238.6 ORF91057 - 0.12 12.9 2.1 0.5 10.9 2.1 2.1 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF91057 - 0.14 11.9 1.3 3.9 7.2 1.3 2.4 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF91057 - 0.19 11.8 0.9 0.79 9.8 0.9 2.1 1 1 0 1 1 1 0 AAA domain DUF3781 PF12636.7 ORF91057 - 4.1 7.3 9.3 1.8 8.5 3.3 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3781) GST_N_3 PF13417.6 ORF89652 - 1.3e-10 41.6 0.0 2.7e-10 40.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF89652 - 2.3e-10 40.7 0.0 4.8e-10 39.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF89652 - 4.6e-08 33.2 0.0 8.3e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF89652 - 6e-07 29.4 0.0 2.3e-06 27.5 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF89652 - 5.2e-06 26.6 0.0 8.4e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF89652 - 5.5e-05 23.4 0.0 0.00012 22.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain PDZ PF00595.24 ORF89012 - 0.0014 18.9 0.0 0.0025 18.1 0.0 1.4 1 0 0 1 1 1 1 PDZ domain Mob1_phocein PF03637.17 ORF88472 - 1.7e-70 236.4 1.0 2.1e-70 236.2 1.0 1.1 1 0 0 1 1 1 1 Mob1/phocein family DUF5595 PF18077.1 ORF88472 - 1.3 9.2 4.9 0.77 9.9 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF5595) COG7 PF10191.9 ORF8634 - 8.6e-09 34.2 0.9 1.5e-08 33.4 0.9 1.3 1 0 0 1 1 1 1 Golgi complex component 7 (COG7) GST_C_6 PF17171.4 ORF8634 - 0.15 11.9 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain OSCP PF00213.18 ORF85775 - 8.5e-31 107.4 0.3 1.1e-30 107.1 0.3 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit DUF3333 PF11812.8 ORF85775 - 0.0044 17.2 0.1 0.015 15.5 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF3333) DUF2098 PF09871.9 ORF85775 - 0.12 12.7 0.2 0.24 11.8 0.2 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) Sulfatase PF00884.23 ORF8541 - 6.5e-14 52.0 0.0 1e-13 51.4 0.0 1.3 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 ORF8541 - 0.017 15.8 0.0 0.025 15.3 0.0 1.3 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase NAD_binding_10 PF13460.6 ORF83342 - 2e-09 37.6 0.0 3.2e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding HIM1 PF08732.10 ORF83342 - 2.6e-06 27.0 0.0 4e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 HIM1 Semialdhyde_dh PF01118.24 ORF83342 - 2.7e-06 27.8 0.0 8.8e-06 26.2 0.0 1.9 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Epimerase PF01370.21 ORF83342 - 1.3e-05 24.8 0.0 3.5e-05 23.4 0.0 1.8 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF83342 - 0.00042 19.6 0.0 0.14 11.3 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein DapB_N PF01113.20 ORF83342 - 0.047 13.8 0.0 0.072 13.2 0.0 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus RmlD_sub_bind PF04321.17 ORF83342 - 0.063 12.4 0.0 2.1 7.3 0.0 2.1 2 0 0 2 2 2 0 RmlD substrate binding domain F420H2_quin_red PF04075.14 ORF83342 - 0.1 12.7 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 F420H(2)-dependent quinone reductase COPR5 PF15340.6 ORF82829 - 1.1 9.9 14.7 0.048 14.3 5.4 2.1 1 1 1 2 2 2 0 Cooperator of PRMT5 family ICMT PF04140.14 ORF82793 - 0.098 13.1 0.6 0.098 13.1 0.6 1.8 2 1 0 2 2 2 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family FtsX PF02687.21 ORF82793 - 3.9 8.0 6.3 17 6.0 3.1 2.7 2 1 1 3 3 3 0 FtsX-like permease family Coatomer_WDAD PF04053.14 ORF82542 - 0.0092 15.1 1.7 0.017 14.2 1.7 1.6 1 1 0 1 1 1 1 Coatomer WD associated region CNH PF00780.22 ORF82542 - 0.047 13.3 0.3 0.31 10.6 0.1 2.3 1 1 1 2 2 2 0 CNH domain Esterase_phd PF10503.9 ORF80682 - 3.8e-05 23.3 0.2 5.8e-05 22.7 0.2 1.3 1 0 0 1 1 1 1 Esterase PHB depolymerase Hydrolase_4 PF12146.8 ORF80682 - 0.035 13.4 0.9 2.9 7.1 0.5 2.1 1 1 1 2 2 2 0 Serine aminopeptidase, S33 Arrestin_N PF00339.29 ORF80436 - 9.7e-07 28.9 0.0 1.2e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Rgp1 PF08737.10 ORF80436 - 0.25 10.5 0.4 1.3 8.1 0.0 1.9 1 1 1 2 2 2 0 Rgp1 BPD_transp_1 PF00528.22 ORF79356 - 2.2e-15 56.9 12.7 2.9e-15 56.5 12.7 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SNARE_assoc PF09335.11 ORF78406 - 2.9e-06 27.8 1.0 2.9e-06 27.8 1.0 1.9 2 0 0 2 2 2 1 SNARE associated Golgi protein PBP1_TM PF14812.6 ORF78406 - 0.0023 18.2 0.0 0.0041 17.4 0.0 1.4 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF2663 PF10864.8 ORF78406 - 0.11 12.9 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Saf_2TM PF18303.1 ORF78406 - 0.58 9.7 0.0 0.58 9.7 0.0 2.4 2 1 0 2 2 2 0 SAVED-fused 2TM effector domain Promethin PF16015.5 ORF78406 - 0.65 9.9 6.7 0.18 11.7 3.3 1.7 1 1 1 2 2 2 0 Promethin DUF2207 PF09972.9 ORF78406 - 2.5 6.8 9.3 1.4 7.6 0.0 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) AAA PF00004.29 ORF76912 - 1.4e-20 74.1 0.0 2e-20 73.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF76912 - 5.8e-07 29.2 0.1 1.9e-06 27.5 0.1 1.9 2 0 0 2 2 2 1 AAA+ lid domain Vps4_C PF09336.10 ORF76912 - 0.014 15.4 0.0 0.057 13.4 0.0 2.0 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain TMEM40 PF15817.5 ORF75007 - 0.025 14.3 0.9 0.034 13.9 0.1 1.6 2 0 0 2 2 2 0 Transmembrane protein 40 family Phage_H_T_join PF05521.11 ORF75007 - 0.038 14.5 0.1 0.062 13.8 0.1 1.3 1 0 0 1 1 1 0 Phage head-tail joining protein Snf7 PF03357.21 ORF74203 - 4.6e-07 29.6 8.0 1.1e-06 28.3 7.6 1.8 2 0 0 2 2 2 1 Snf7 SKA1 PF07160.12 ORF74203 - 0.11 12.4 0.5 0.14 11.9 0.5 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 1 Pex14_N PF04695.13 ORF74203 - 0.17 12.6 8.1 0.23 12.1 8.1 1.3 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Filo_glycop PF01611.16 ORF73110 - 0.14 11.1 0.0 0.18 10.7 0.0 1.1 1 0 0 1 1 1 0 Filovirus glycoprotein YEATS PF03366.16 ORF69596 - 9.3e-19 67.2 0.1 1.5e-18 66.5 0.1 1.4 1 0 0 1 1 1 1 YEATS family zf-RING_2 PF13639.6 ORF69596 - 4e-07 30.2 5.6 1.2e-06 28.7 4.4 2.3 3 0 0 3 3 3 1 Ring finger domain Prok-RING_4 PF14447.6 ORF69596 - 1.7e-06 27.8 3.0 3.2e-06 26.9 3.0 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF69596 - 2.8e-06 27.1 5.0 5.9e-06 26.1 5.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF69596 - 2.8e-06 27.2 4.2 5.5e-06 26.2 4.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF69596 - 9.3e-06 25.4 5.0 2.3e-05 24.2 5.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF69596 - 9.5e-06 25.4 4.3 1.8e-05 24.5 4.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF69596 - 0.00012 22.3 2.6 0.00026 21.2 2.6 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF69596 - 0.00012 22.0 3.2 0.00012 22.0 3.2 2.5 2 1 1 3 3 3 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF69596 - 0.00025 21.0 0.6 0.00052 20.0 0.6 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 ORF69596 - 0.00041 20.1 4.9 0.015 15.1 3.1 3.1 3 0 0 3 3 3 1 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 ORF69596 - 0.00047 20.2 4.8 0.00096 19.3 4.8 1.6 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF69596 - 0.014 15.2 3.6 0.027 14.3 3.6 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_10 PF16685.5 ORF69596 - 0.043 13.9 1.2 0.11 12.7 1.2 1.7 1 0 0 1 1 1 0 zinc RING finger of MSL2 Radial_spoke_3 PF06098.11 ORF67082 - 1.2e-08 34.6 1.3 1.7e-08 34.1 1.3 1.2 1 0 0 1 1 1 1 Radial spoke protein 3 DUF4378 PF14309.6 ORF67082 - 0.06 13.7 0.2 0.11 12.8 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4378) TENA_THI-4 PF03070.16 ORF66491 - 1.3e-11 44.7 0.0 1.8e-11 44.3 0.0 1.1 1 0 0 1 1 1 1 TENA/THI-4/PQQC family APC_N_CC PF16689.5 ORF65212 - 0.00041 20.3 10.2 0.00063 19.7 1.9 2.9 2 0 0 2 2 2 1 Coiled-coil N-terminus of APC, dimerisation domain Selenoprotein_S PF06936.11 ORF65212 - 0.0066 16.3 5.3 0.009 15.8 5.3 1.2 1 0 0 1 1 1 1 Selenoprotein S (SelS) NYD-SP28_assoc PF14775.6 ORF65212 - 0.15 12.2 6.4 0.86 9.8 1.3 2.7 2 1 0 2 2 2 0 Sperm tail C-terminal domain ABC_tran_CTD PF16326.5 ORF65212 - 0.59 10.4 8.4 0.89 9.8 6.8 2.1 1 1 1 2 2 2 0 ABC transporter C-terminal domain bZIP_1 PF00170.21 ORF65212 - 4.7 7.4 21.0 0.73 10.0 3.4 4.3 3 2 0 3 3 3 0 bZIP transcription factor TSC22 PF01166.18 ORF65212 - 4.7 7.6 13.2 1.4 9.3 1.5 3.2 2 1 0 3 3 3 0 TSC-22/dip/bun family Aldo_ket_red PF00248.21 ORF64994 - 1.1e-18 67.4 0.0 1.5e-18 67.0 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family DUF2719 PF10891.8 ORF6467 - 0.065 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2719) EF-hand_1 PF00036.32 ORF63793 - 1.1e-31 105.9 14.6 6.2e-09 34.8 1.8 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF63793 - 2.9e-25 88.5 7.8 4.9e-12 46.1 0.1 3.1 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF63793 - 8.6e-25 85.1 15.8 2.2e-06 26.9 0.8 4.3 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF63793 - 1.4e-24 83.9 12.1 6.1e-07 28.9 0.4 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF63793 - 8.9e-17 60.7 13.7 1.7e-07 31.0 3.6 4.2 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF63793 - 3.7e-08 33.7 1.9 0.0024 18.2 0.3 2.6 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Pkinase PF00069.25 ORF63793 - 0.00077 18.9 0.2 0.0025 17.2 0.0 1.9 2 1 1 3 3 3 1 Protein kinase domain EF-hand_4 PF12763.7 ORF63793 - 0.00099 19.0 7.6 2.1 8.3 0.0 4.0 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand Haemagg_act PF05860.13 ORF63793 - 0.0013 18.7 4.1 0.26 11.2 0.1 3.1 1 1 1 2 2 2 1 haemagglutination activity domain Dockerin_1 PF00404.18 ORF63793 - 0.003 17.7 8.9 0.66 10.2 0.1 4.2 3 1 0 3 3 3 1 Dockerin type I domain EF-hand_9 PF14658.6 ORF63793 - 0.0096 16.2 0.9 0.56 10.6 0.2 2.8 1 1 2 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF63793 - 0.011 15.6 1.1 7.2 6.5 0.0 3.2 1 1 2 4 4 4 0 Caleosin related protein COS PF18568.1 ORF63793 - 0.076 13.0 0.2 0.34 10.9 0.0 2.2 2 0 0 2 2 2 0 TRIM C-terminal subgroup One Signature domain p25-alpha PF05517.12 ORF63793 - 0.076 13.2 2.1 9.3 6.4 0.1 3.2 2 1 2 4 4 4 0 p25-alpha Phage_int_SAM_5 PF13102.6 ORF63793 - 0.13 12.6 4.1 2.4 8.6 1.8 2.7 2 1 0 2 2 2 0 Phage integrase SAM-like domain LysR_substrate PF03466.20 ORF63317 - 5.6e-37 127.2 0.3 6.3e-37 127.0 0.3 1.0 1 0 0 1 1 1 1 LysR substrate binding domain SNARE_assoc PF09335.11 ORF59938 - 2.7e-06 27.9 1.0 2.7e-06 27.9 1.0 1.9 2 0 0 2 2 2 1 SNARE associated Golgi protein PBP1_TM PF14812.6 ORF59938 - 0.0023 18.2 0.0 0.0041 17.4 0.0 1.4 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Saf_2TM PF18303.1 ORF59938 - 0.072 12.7 0.8 0.58 9.7 0.0 2.3 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain DUF2663 PF10864.8 ORF59938 - 0.11 12.9 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Promethin PF16015.5 ORF59938 - 1.5 8.8 6.1 0.57 10.1 3.1 1.8 1 1 1 2 2 2 0 Promethin DUF2207 PF09972.9 ORF59938 - 1.9 7.2 8.8 1.4 7.6 0.0 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF1324 PF07038.11 ORF59381 - 0.0061 16.8 0.0 0.013 15.7 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1324) TPR_19 PF14559.6 ORF57843 - 1.4e-07 31.9 4.7 0.32 11.5 0.7 3.8 2 1 2 4 4 4 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF57843 - 1.1e-06 28.8 0.6 0.096 12.9 0.1 3.0 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 HrpB1_HrpK PF09613.10 ORF57843 - 0.00011 21.9 0.1 0.32 10.6 0.0 3.1 1 1 2 3 3 3 1 Bacterial type III secretion protein (HrpB1_HrpK) PPR_2 PF13041.6 ORF57843 - 0.001 19.2 0.5 0.011 15.9 0.2 2.7 3 0 0 3 3 3 1 PPR repeat family TPR_14 PF13428.6 ORF57843 - 0.0033 18.1 0.0 28 5.9 0.0 3.8 3 1 1 4 4 4 0 Tetratricopeptide repeat RasGEF_N PF00618.20 ORF57843 - 0.0061 16.8 1.3 0.23 11.7 0.0 2.4 2 0 0 2 2 2 1 RasGEF N-terminal motif TPR_6 PF13174.6 ORF57843 - 0.057 14.1 0.4 1.3e+02 3.5 0.1 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat PPR PF01535.20 ORF57843 - 0.078 13.3 0.0 0.58 10.5 0.0 2.4 2 0 0 2 2 2 0 PPR repeat ATP13 PF12921.7 ORF57843 - 0.082 12.8 1.9 0.65 9.9 0.3 2.4 2 0 0 2 2 2 0 Mitochondrial ATPase expression PriA_C PF18074.1 ORF57843 - 0.17 12.7 4.9 0.2 12.5 0.6 2.9 3 1 0 3 3 3 0 Primosomal protein N C-terminal domain SRP_TPR_like PF17004.5 ORF57843 - 0.18 11.8 7.7 0.83 9.7 0.7 2.8 1 1 1 2 2 2 0 Putative TPR-like repeat TPR_MalT PF17874.1 ORF57843 - 0.23 10.8 1.8 1.2 8.5 1.4 2.2 2 1 1 3 3 3 0 MalT-like TPR region TPR_8 PF13181.6 ORF57843 - 0.44 10.9 9.1 3.4 8.1 0.1 4.7 6 0 0 6 6 6 0 Tetratricopeptide repeat L27_N PF09060.10 ORF57843 - 0.91 9.6 5.0 1.1 9.4 0.2 3.0 3 0 0 3 3 3 0 L27_N Prp18 PF02840.15 ORF57843 - 0.98 9.5 6.8 0.38 10.8 2.6 2.3 3 0 0 3 3 3 0 Prp18 domain adh_short PF00106.25 ORF57703 - 8.5e-25 87.4 0.1 9.8e-25 87.2 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF57703 - 2.7e-11 43.5 0.0 3.6e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF57703 - 0.0015 18.5 0.1 0.0049 16.8 0.1 1.8 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF57703 - 0.012 15.2 1.3 0.013 15.0 0.2 1.6 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RRM_1 PF00076.22 ORF57642 - 0.00048 19.9 0.0 0.00085 19.1 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Fib_alpha PF08702.10 ORF57392 - 0.34 11.1 1.5 1.9 8.7 0.1 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family GST_C_3 PF14497.6 ORF57081 - 7.1e-15 55.0 0.1 1.6e-14 53.9 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF57081 - 2.4e-11 43.8 0.0 7.7e-11 42.2 0.0 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF57081 - 0.0065 16.9 0.0 0.015 15.7 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF57081 - 0.024 14.9 0.1 0.066 13.4 0.0 1.7 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF57081 - 0.12 12.4 0.3 0.53 10.3 0.3 2.3 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain APC_N_CC PF16689.5 ORF56000 - 0.00041 20.3 10.2 0.00063 19.7 1.9 2.9 2 0 0 2 2 2 1 Coiled-coil N-terminus of APC, dimerisation domain Selenoprotein_S PF06936.11 ORF56000 - 0.0066 16.3 5.3 0.009 15.8 5.3 1.2 1 0 0 1 1 1 1 Selenoprotein S (SelS) NYD-SP28_assoc PF14775.6 ORF56000 - 0.15 12.2 6.4 0.86 9.8 1.3 2.7 2 1 0 2 2 2 0 Sperm tail C-terminal domain ABC_tran_CTD PF16326.5 ORF56000 - 0.59 10.4 8.4 0.89 9.8 6.8 2.1 1 1 1 2 2 2 0 ABC transporter C-terminal domain bZIP_1 PF00170.21 ORF56000 - 4.7 7.4 21.0 0.73 10.0 3.4 4.3 3 2 0 3 3 3 0 bZIP transcription factor TSC22 PF01166.18 ORF56000 - 4.7 7.6 13.2 1.4 9.3 1.5 3.2 2 1 0 3 3 3 0 TSC-22/dip/bun family Ndc1_Nup PF09531.10 ORF55185 - 2.8 6.5 4.1 2.8 6.5 4.1 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Presenilin PF01080.17 ORF55185 - 5.3 5.7 5.2 5.5 5.6 5.2 1.2 1 0 0 1 1 1 0 Presenilin WD40 PF00400.32 ORF524 - 9.2e-09 35.8 0.2 0.11 13.4 0.0 4.5 5 0 0 5 5 5 3 WD domain, G-beta repeat DUF4199 PF13858.6 ORF50616 - 0.00015 22.2 0.3 0.00015 22.2 0.3 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF4199) Endonuc_Holl PF10107.9 ORF50616 - 0.0018 18.2 0.2 0.0029 17.5 0.2 1.3 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase DUF4834 PF16118.5 ORF50616 - 0.0097 16.9 3.5 0.034 15.1 0.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4834) Virul_fac_BrkB PF03631.15 ORF50616 - 0.014 15.0 0.1 0.022 14.4 0.1 1.3 1 0 0 1 1 1 0 Virulence factor BrkB DUF2207 PF09972.9 ORF50616 - 0.071 11.9 3.8 8.6 5.0 4.3 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) TRP PF06011.12 ORF50616 - 0.23 10.2 4.4 1 8.0 3.2 1.9 1 1 1 2 2 2 0 Transient receptor potential (TRP) ion channel Comm PF15957.5 ORF50616 - 0.24 11.7 0.1 0.24 11.7 0.1 1.8 1 1 1 2 2 2 0 Commissureless RRM_1 PF00076.22 ORF49446 - 2.9e-31 107.1 0.1 3.5e-16 58.8 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF49446 - 8.9e-05 22.1 0.0 0.0006 19.4 0.0 2.0 1 1 1 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF49446 - 0.097 12.5 0.0 1.2 9.1 0.0 2.2 2 0 0 2 2 2 0 Occluded RNA-recognition motif Lipoprotein_16 PF03923.13 ORF49220 - 6.2e-53 178.7 4.8 7.3e-53 178.5 4.8 1.0 1 0 0 1 1 1 1 Uncharacterized lipoprotein LPAM_1 PF08139.12 ORF49220 - 6.9e-05 23.1 1.2 0.00014 22.2 1.2 1.5 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site AcylCoA_DH_N PF12418.8 ORF49220 - 0.11 12.6 0.3 0.21 11.7 0.3 1.5 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase N terminal ExoD PF06055.12 ORF47894 - 0.0029 17.0 1.2 0.0029 17.0 1.2 1.9 2 0 0 2 2 2 1 Exopolysaccharide synthesis, ExoD FixP_N PF14715.6 ORF47894 - 0.21 11.4 0.2 0.21 11.4 0.2 3.4 6 0 0 6 6 6 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Usher PF00577.20 ORF46762 - 8.2e-35 120.7 0.4 9.6e-35 120.4 0.4 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF46762 - 3.6e-13 49.1 0.0 7.7e-13 48.1 0.0 1.6 1 0 0 1 1 1 1 PapC C-terminal domain ParA PF10609.9 ORF46508 - 3.3e-83 278.9 0.0 3.7e-83 278.8 0.0 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase DUF1610 PF07754.11 ORF46508 - 0.06 13.3 0.4 0.16 12.0 0.4 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1610) AAA_26 PF13500.6 ORF46508 - 0.18 11.6 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain PEPCK_ATP PF01293.20 ORF46024 - 1.4e-82 277.9 0.0 1.6e-82 277.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase CGI-121 PF08617.10 ORF44945 - 0.01 16.0 0.0 0.012 15.7 0.0 1.4 1 1 0 1 1 1 0 Kinase binding protein CGI-121 Proho_convert PF12177.8 ORF40055 - 2.6 8.1 9.4 0.2 11.7 1.2 2.9 3 0 0 3 3 3 0 Prohormone convertase enzyme TRP PF06011.12 ORF38086 - 0.00012 21.0 15.6 0.00018 20.4 15.6 1.3 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Na_H_antiport_1 PF06965.12 ORF38086 - 0.0018 17.2 2.2 0.0021 17.0 2.2 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter 1 EF-hand_6 PF13405.6 ORF36328 - 1.7e-05 24.3 0.4 8.8e-05 22.1 0.4 2.3 1 1 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF36328 - 0.00019 20.8 0.2 0.00071 19.0 0.2 2.1 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF36328 - 0.0011 19.3 3.2 0.0021 18.5 0.2 2.2 2 0 0 2 2 2 1 EF-hand domain pair FAM176 PF14851.6 ORF36328 - 0.051 13.2 1.2 0.069 12.8 1.2 1.2 1 0 0 1 1 1 0 FAM176 family DUF4046 PF13255.6 ORF35884 - 0.069 13.7 0.1 0.14 12.7 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4046) Thioredoxin_16 PF18569.1 ORF35884 - 0.07 13.3 1.1 3.2 7.9 0.3 2.4 1 1 1 2 2 2 0 Thioredoxin-like domain Leo1 PF04004.13 ORF34390 - 1.6e-27 96.4 5.2 4.9e-27 94.8 5.2 1.6 1 1 0 1 1 1 1 Leo1-like protein Sugar_tr PF00083.24 ORF33502 - 3.3e-19 69.1 9.8 3.9e-19 68.8 9.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF33502 - 0.00046 19.2 5.8 0.00046 19.2 5.8 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF5538 PF17692.1 ORF30815 - 1.2 9.2 10.8 1.1 9.3 0.5 2.4 1 1 0 2 2 2 0 Family of unknown function (DUF5538) DUF1980 PF09323.10 ORF29381 - 0.0062 16.5 1.1 0.0092 15.9 0.7 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF1980) BaxI_1 PF12811.7 ORF29381 - 0.57 9.7 12.4 0.66 9.5 11.4 1.5 1 1 0 1 1 1 0 Bax inhibitor 1 like DUF1772 PF08592.11 ORF29381 - 3.4 8.0 12.2 1 9.7 0.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF1772) Proho_convert PF12177.8 ORF26344 - 2.4 8.2 9.4 0.2 11.7 1.2 3.0 3 0 0 3 3 3 0 Prohormone convertase enzyme SOR_SNZ PF01680.17 ORF25781 - 4.9e-42 144.1 0.6 8.9e-42 143.2 0.2 1.6 2 0 0 2 2 2 1 SOR/SNZ family ThiG PF05690.14 ORF25781 - 1.8e-08 34.0 0.4 4.7e-08 32.7 0.3 1.7 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG TetR_C_27 PF17935.1 ORF25781 - 1.9e-05 24.7 0.1 0.00011 22.2 0.0 2.0 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain NanE PF04131.14 ORF25781 - 0.00096 18.4 0.1 0.0021 17.3 0.0 1.5 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 ORF25781 - 0.00098 18.6 0.2 0.0041 16.6 0.1 1.8 2 0 0 2 2 2 1 Histidine biosynthesis protein FMN_dh PF01070.18 ORF25781 - 0.02 14.0 0.0 0.028 13.5 0.0 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase OMPdecase PF00215.24 ORF25781 - 0.02 14.5 0.3 1.9 8.0 0.0 2.1 1 1 1 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family IMPDH PF00478.25 ORF25781 - 0.031 13.3 0.1 0.046 12.7 0.1 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain IGPS PF00218.21 ORF25781 - 0.038 13.2 0.0 0.053 12.7 0.0 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase Phage_Cox PF10743.9 ORF25781 - 0.099 12.7 0.1 0.23 11.6 0.1 1.6 1 1 0 1 1 1 0 Regulatory phage protein cox CBM_20 PF00686.19 ORF20815 - 3e-06 27.0 0.0 6.6e-06 26.0 0.0 1.6 1 1 0 1 1 1 1 Starch binding domain HydF_tetramer PF18133.1 ORF20815 - 0.1 12.3 0.7 0.26 11.0 0.4 1.9 1 1 1 2 2 2 0 Hydrogen maturase F tetramerization domain COPIIcoated_ERV PF07970.12 ORF20777 - 3.3e-19 69.6 0.6 4.6e-19 69.2 0.6 1.2 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter SF-assemblin PF06705.11 ORF18644 - 1.6e-19 70.3 11.4 1.8e-19 70.0 11.4 1.0 1 0 0 1 1 1 1 SF-assemblin/beta giardin DUF842 PF05811.13 ORF18644 - 0.014 15.1 1.7 0.014 15.1 1.7 2.2 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF842) Dict-STAT-coil PF09267.10 ORF18644 - 0.015 15.6 6.5 0.021 15.2 0.4 2.4 2 1 0 2 2 2 0 Dictyostelium STAT, coiled coil Gal11_ABD1 PF18535.1 ORF18644 - 0.068 13.3 0.0 0.21 11.7 0.0 1.8 1 0 0 1 1 1 0 Gal11 activator-binding domain (ABD1) Snapin_Pallidin PF14712.6 ORF18644 - 0.08 13.4 8.7 0.29 11.6 1.8 3.2 2 2 0 2 2 2 0 Snapin/Pallidin Phage_Mu_Gam PF07352.12 ORF18644 - 0.46 10.4 9.8 0.27 11.1 2.2 2.3 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein FUSC PF04632.12 ORF18644 - 0.58 8.6 12.2 0.89 8.0 12.2 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Fib_alpha PF08702.10 ORF18644 - 0.63 10.2 10.8 4 7.6 8.1 2.4 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family WAC_Acf1_DNA_bd PF10537.9 ORF18644 - 0.74 10.4 5.5 0.27 11.8 1.5 2.1 1 1 1 2 2 2 0 ATP-utilising chromatin assembly and remodelling N-terminal DUF445 PF04286.12 ORF18644 - 1.1 8.9 9.4 1.6 8.5 9.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) LCIB_C_CA PF18599.1 ORF18644 - 1.2 8.3 5.9 8.3 5.6 1.1 2.1 1 1 0 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases PIN_8 PF18476.1 ORF18644 - 1.2 8.9 12.3 99 2.7 12.3 2.1 1 1 0 1 1 1 0 PIN like domain DUF3584 PF12128.8 ORF18644 - 2 5.8 20.6 2.5 5.5 20.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF2405 PF10293.9 ORF18644 - 2.3 8.2 7.0 0.11 12.5 1.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF2405) FeoB_Cyto PF17910.1 ORF18644 - 2.3 8.8 10.1 0.76 10.4 5.0 2.4 1 1 1 2 2 2 0 FeoB cytosolic helical domain DUF724 PF05266.14 ORF18644 - 2.7 7.8 12.9 6.1 6.6 6.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF2570 PF10828.8 ORF18644 - 7 6.5 10.8 1.9 8.4 3.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) FliJ PF02050.16 ORF17356 - 0.012 15.9 1.3 0.11 12.7 0.0 2.3 2 0 0 2 2 2 0 Flagellar FliJ protein TSC22 PF01166.18 ORF17356 - 0.044 14.1 1.4 0.093 13.1 0.7 1.9 1 1 0 1 1 1 0 TSC-22/dip/bun family FlaC_arch PF05377.11 ORF17356 - 0.076 13.4 1.7 0.21 12.0 0.2 2.3 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Spc24 PF08286.11 ORF17356 - 0.37 11.1 4.8 0.24 11.7 1.2 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 DUF5320 PF17253.2 ORF17356 - 2 9.6 3.4 0.74 10.9 0.2 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5320) CCDC-167 PF15188.6 ORF17356 - 2.9 8.3 8.4 1.2 9.5 1.1 2.6 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 167 Ras PF00071.22 ORF16253 - 5e-49 166.0 3.0 6.3e-49 165.7 3.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF16253 - 2e-31 108.7 0.4 3.9e-31 107.8 0.4 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF16253 - 2.5e-10 40.1 0.5 3.2e-10 39.7 0.5 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF16253 - 3e-06 27.3 0.1 4.6e-06 26.7 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF16253 - 0.00032 20.1 0.6 0.00049 19.5 0.6 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF16253 - 0.018 15.0 0.3 0.83 9.5 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase Galactosyl_T PF01762.21 ORF16253 - 0.038 13.8 0.2 0.06 13.2 0.2 1.3 1 0 0 1 1 1 0 Galactosyltransferase T2SS_PulS_OutS PF09691.10 ORF16253 - 0.067 13.4 0.2 0.3 11.3 0.1 2.0 2 0 0 2 2 2 0 Type II secretion system pilotin lipoprotein (PulS_OutS) Raptor_N PF14538.6 ORF16253 - 0.081 12.9 0.1 0.3 11.0 0.0 1.8 1 1 1 2 2 2 0 Raptor N-terminal CASPase like domain ETC_C1_NDUFA4 PF04800.12 ORF16253 - 0.12 12.6 0.4 0.2 11.9 0.4 1.5 1 1 0 1 1 1 0 ETC complex I subunit conserved region D123 PF07065.14 ORF14633 - 0.0033 16.6 0.0 0.05 12.8 0.0 2.1 2 0 0 2 2 2 2 D123 Amdase PF17645.1 ORF12148 - 5e-24 85.1 0.0 5.9e-24 84.9 0.0 1.0 1 0 0 1 1 1 1 Arylmalonate decarboxylase DivIVA PF05103.13 ORF12092 - 0.0022 18.1 6.7 0.0036 17.4 0.7 2.4 2 0 0 2 2 2 2 DivIVA protein Flagellin_N PF00669.20 ORF110781 - 0.23 11.6 7.1 0.093 12.8 5.0 1.4 2 0 0 2 2 1 0 Bacterial flagellin N-terminal helical region DUF812 PF05667.11 ORF110781 - 0.44 9.4 12.2 0.47 9.3 12.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DLP_helical PF18709.1 ORF110781 - 0.57 9.3 5.6 0.95 8.6 5.6 1.4 1 0 0 1 1 1 0 Dynamin-like helical domain Seryl_tRNA_N PF02403.22 ORF110781 - 0.87 9.8 11.4 1.7 8.9 11.4 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Tho2 PF11262.8 ORF110781 - 1.7 7.8 5.3 2 7.5 5.3 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ATG16 PF08614.11 ORF110781 - 2.9 8.1 27.9 1.2 9.3 20.2 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 ORF110781 - 3 7.8 25.6 3.9 7.5 24.2 1.8 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 T7SS_ESX_EspC PF10824.8 ORF110781 - 3.2 8.3 7.0 3.3 8.2 3.0 2.3 2 1 0 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm FapA PF03961.13 ORF110781 - 3.5 6.1 7.0 4.1 5.9 7.0 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Prominin PF05478.11 ORF110781 - 3.8 5.3 4.5 4.9 5.0 4.5 1.1 1 0 0 1 1 1 0 Prominin XhlA PF10779.9 ORF110781 - 4 7.7 7.5 0.98 9.7 2.5 2.4 2 1 1 3 3 3 0 Haemolysin XhlA Exonuc_VII_L PF02601.15 ORF110781 - 4.4 6.8 13.0 5.7 6.4 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Spc7 PF08317.11 ORF110781 - 6.2 5.6 19.5 3.4 6.5 17.4 1.6 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF4407 PF14362.6 ORF110781 - 6.8 6.0 15.2 9.9 5.4 15.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF724 PF05266.14 ORF110781 - 8.4 6.2 14.9 3.4 7.5 11.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF3584 PF12128.8 ORF110781 - 9.6 3.6 19.7 12 3.2 19.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) EF-hand_1 PF00036.32 ORF110480 - 5.4e-25 85.0 17.8 1.2e-05 24.5 0.5 6.1 6 1 0 6 6 6 5 EF hand EF-hand_7 PF13499.6 ORF110480 - 5.9e-21 74.7 21.3 2.1e-09 37.7 1.1 4.5 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF110480 - 1.6e-20 71.2 13.5 0.00073 19.3 0.2 5.7 5 1 0 5 5 5 5 EF-hand domain EF-hand_5 PF13202.6 ORF110480 - 4.7e-19 66.9 12.1 0.0023 17.3 0.1 5.5 5 0 0 5 5 5 5 EF hand EF-hand_8 PF13833.6 ORF110480 - 2.6e-13 49.6 10.7 0.0034 17.2 0.1 5.3 5 0 0 5 5 5 3 EF-hand domain pair EF-hand_10 PF14788.6 ORF110480 - 0.002 17.9 1.2 0.0064 16.3 0.2 2.4 3 0 0 3 3 3 1 EF hand SHOCT PF09851.9 ORF110480 - 0.032 14.0 0.5 5.7 6.8 0.0 3.3 4 0 0 4 4 4 0 Short C-terminal domain EF-hand_4 PF12763.7 ORF110480 - 0.086 12.8 3.5 20 5.2 0.1 3.5 2 2 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand Metallophos_2 PF12850.7 ORF110480 - 0.11 12.7 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Peroxidase_2 PF01328.17 ORF110480 - 0.13 12.8 0.3 0.18 12.3 0.3 1.5 1 1 0 1 1 1 0 Peroxidase, family 2 Caleosin PF05042.13 ORF110480 - 0.15 12.0 2.6 11 5.9 0.0 3.6 2 2 2 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF110480 - 0.23 11.7 4.4 0.79 10.0 0.0 3.3 4 0 0 4 4 4 0 Dockerin type I domain Ribonucleas_3_3 PF14622.6 ORF110056 - 7.7e-34 116.6 0.0 1.1e-33 116.1 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.26 ORF110056 - 3.4e-20 72.6 0.0 6.7e-20 71.7 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease III domain dsrm PF00035.26 ORF110056 - 4.4e-15 56.2 0.0 7.4e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 Double-stranded RNA binding motif DND1_DSRM PF14709.7 ORF110056 - 8.2e-06 26.0 0.0 1.5e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 double strand RNA binding domain from DEAD END PROTEIN 1 Iso_dh PF00180.20 ORF108127 - 1.2e-83 281.1 0.0 1.4e-83 280.9 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase ATP-cone PF03477.16 ORF108127 - 0.0047 17.5 0.1 1.4 9.6 0.0 2.3 2 0 0 2 2 2 2 ATP cone domain Cupin_4 PF08007.12 ORF107584 - 2e-05 24.2 0.0 3e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF107584 - 0.0002 21.8 0.0 0.00047 20.6 0.0 1.6 1 1 0 1 1 1 1 JmjC domain, hydroxylase Cupin_8 PF13621.6 ORF107584 - 0.0049 16.6 0.0 2.9 7.5 0.0 2.2 1 1 1 2 2 2 2 Cupin-like domain PTR2 PF00854.21 ORF106056 - 1e-21 77.2 0.0 1.3e-21 76.9 0.0 1.1 1 0 0 1 1 1 1 POT family Sugar_tr PF00083.24 ORF106056 - 0.0013 17.7 0.0 0.0016 17.4 0.0 1.3 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF106056 - 0.087 11.7 3.6 0.17 10.8 3.6 1.6 1 1 0 1 1 1 0 Major Facilitator Superfamily Pkinase PF00069.25 ORF105784 - 5.6e-19 68.5 0.0 7.1e-19 68.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105784 - 1.9e-10 40.4 0.0 2.2e-10 40.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1281_C PF18406.1 ORF104792 - 0.036 13.8 0.0 0.11 12.2 0.0 1.8 2 0 0 2 2 2 0 Ferredoxin-like domain in Api92-like protein DUF1635 PF07795.11 ORF101637 - 0.00012 22.0 2.6 0.0002 21.3 2.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1635) GAS PF13851.6 ORF101637 - 0.0065 15.8 6.6 0.0091 15.4 5.0 1.7 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding CENP-K PF11802.8 ORF101637 - 0.012 15.2 1.9 0.021 14.4 1.9 1.3 1 0 0 1 1 1 0 Centromere-associated protein K TMF_TATA_bd PF12325.8 ORF101637 - 0.037 14.2 6.3 0.058 13.6 6.3 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding APG6_N PF17675.1 ORF101637 - 0.077 13.5 5.8 0.12 12.9 5.8 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF101637 - 0.16 10.8 4.2 0.2 10.5 4.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein MscS_porin PF12795.7 ORF101637 - 0.16 11.5 14.5 3.4 7.1 15.2 1.9 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain TMF_DNA_bd PF12329.8 ORF101637 - 0.19 11.7 5.1 0.18 11.8 1.9 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF1690 PF07956.11 ORF101637 - 0.21 12.0 5.3 0.4 11.1 5.3 1.4 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) MCC-bdg_PDZ PF10506.9 ORF101637 - 0.26 11.3 8.1 2.1 8.4 1.9 2.3 1 1 1 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome SlyX PF04102.12 ORF101637 - 0.3 11.7 8.1 0.085 13.5 1.9 2.5 1 1 1 2 2 2 0 SlyX NPV_P10 PF05531.12 ORF101637 - 0.34 11.4 2.2 0.54 10.8 1.2 1.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein KfrA_N PF11740.8 ORF101637 - 0.36 11.5 8.5 0.58 10.8 8.5 1.4 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term Phage_GPO PF05929.11 ORF101637 - 0.42 10.2 3.0 0.56 9.8 3.0 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase FapA PF03961.13 ORF101637 - 0.55 8.8 1.2 0.7 8.4 1.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 ORF101637 - 0.93 8.5 4.8 1.2 8.2 4.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 OmpH PF03938.14 ORF101637 - 0.97 9.8 5.4 1.5 9.2 5.4 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF101637 - 3.9 6.7 7.4 11 5.3 7.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FUSC PF04632.12 ORF101637 - 4.2 5.8 6.0 5.1 5.5 6.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family MgtC PF02308.16 NODE_32348_length_673_cov_3.354232_g25677_i0forward_frame_1 - 4.7e-37 127.0 11.3 6.3e-37 126.6 11.3 1.1 1 0 0 1 1 1 1 MgtC family HdeA PF06411.11 NODE_32348_length_673_cov_3.354232_g25677_i0forward_frame_1 - 7.9e-07 29.2 0.1 1.4e-06 28.4 0.1 1.4 1 0 0 1 1 1 1 HdeA/HdeB family cNMP_binding PF00027.29 NODE_32343_length_673_cov_75.597179_g25672_i0reverse_frame_1 - 3.5e-14 52.6 0.0 2.1e-07 30.9 0.0 2.1 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Lustrin_cystein PF14625.6 NODE_32329_length_673_cov_123.782132_g25658_i0forward_frame_1 - 0.16 12.4 48.7 5.7 7.4 3.2 8.6 4 3 4 8 8 8 0 Lustrin, cysteine-rich repeated domain Ephrin_rec_like PF07699.13 NODE_32329_length_673_cov_123.782132_g25658_i0forward_frame_1 - 2.4 8.0 37.2 0.87 9.4 6.0 5.5 2 2 3 5 5 5 0 Putative ephrin-receptor like Metallothio_PEC PF02068.16 NODE_32302_length_674_cov_86.704225_g21650_i1reverse_frame_1 - 2.2 8.7 7.4 33 4.9 6.2 2.6 1 1 1 2 2 2 0 Plant PEC family metallothionein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks83.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks83.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks83.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks83.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:19:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Zip PF02535.22 NODE_32232_length_675_cov_176.960938_g25571_i0forward_frame_1 - 0.043 13.0 0.0 0.046 12.9 0.0 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter DUF4834 PF16118.5 NODE_32232_length_675_cov_176.960938_g25571_i0forward_frame_1 - 0.16 12.9 2.2 0.46 11.5 2.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF2897 PF11446.8 NODE_32232_length_675_cov_176.960938_g25571_i0forward_frame_1 - 4.8 7.1 8.3 2 8.4 4.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2897) RCC1_2 PF13540.6 NODE_32227_length_675_cov_198.818750_g25566_i0forward_frame_1 - 0.00034 20.3 6.0 0.16 11.8 0.1 3.5 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat Med3 PF11593.8 NODE_32227_length_675_cov_198.818750_g25566_i0forward_frame_1 - 0.32 10.1 12.6 0.43 9.7 12.6 1.3 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal tRNA-synt_2b PF00587.25 NODE_32211_length_676_cov_2.294852_g25556_i0forward_frame_2 - 1e-33 116.8 0.0 1.6e-33 116.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) ROK PF00480.20 NODE_32210_length_676_cov_2.549142_g25555_i0forward_frame_2 - 1.2e-81 274.4 0.4 1.4e-81 274.3 0.4 1.0 1 0 0 1 1 1 1 ROK family Sporozoite_P67 PF05642.11 NODE_32199_length_676_cov_72.109204_g25544_i0reverse_frame_2 - 1.5 6.8 2.6 2.1 6.3 2.6 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Aa_trans PF01490.18 NODE_32199_length_676_cov_72.109204_g25544_i0forward_frame_3 - 1.4e-11 43.8 0.7 1.9e-11 43.4 0.7 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF2298 PF10060.9 NODE_32162_length_677_cov_3.686916_g25511_i0reverse_frame_3 - 0.027 13.2 3.5 0.033 12.9 3.5 1.1 1 0 0 1 1 1 0 Uncharacterized membrane protein (DUF2298) DUF1218 PF06749.12 NODE_32162_length_677_cov_3.686916_g25511_i0reverse_frame_3 - 1.5 9.4 21.3 4.8 7.8 3.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1218) vMSA PF00695.19 NODE_32162_length_677_cov_3.686916_g25511_i0forward_frame_3 - 2.3 7.2 10.4 4.2 6.4 10.4 1.4 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus YMF19 PF02326.15 NODE_32147_length_677_cov_144.895639_g25496_i0forward_frame_2 - 0.3 11.9 0.2 0.3 11.9 0.2 2.3 2 1 0 2 2 2 0 Plant ATP synthase F0 UQ_con PF00179.26 NODE_32144_length_677_cov_267.964174_g25225_i1forward_frame_3 - 4.3e-30 104.2 0.0 5.8e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DHHC PF01529.20 NODE_32142_length_677_cov_304.607477_g25342_i1reverse_frame_2 - 9.2e-13 48.5 4.9 9.2e-13 48.5 4.9 2.2 2 0 0 2 2 2 1 DHHC palmitoyltransferase PDGF_N PF04692.13 NODE_32125_length_678_cov_79.300156_g25480_i0forward_frame_2 - 0.0031 18.2 1.1 0.0056 17.4 1.1 1.3 1 0 0 1 1 1 1 Platelet-derived growth factor, N terminal region ATG16 PF08614.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.00037 20.8 48.1 0.035 14.3 9.9 3.1 1 1 2 3 3 3 3 Autophagy protein 16 (ATG16) GIT1_C PF12205.8 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.0051 16.9 3.9 0.0051 16.9 3.9 2.6 2 1 0 2 2 2 1 G protein-coupled receptor kinase-interacting protein 1 C term BST2 PF16716.5 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.0098 16.5 12.3 0.0098 16.5 12.3 4.2 1 1 2 4 4 4 1 Bone marrow stromal antigen 2 Mod_r PF07200.13 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.05 13.7 43.5 0.27 11.3 19.3 3.0 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein FPP PF05911.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.23 9.6 53.8 0.024 12.8 29.3 2.0 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil CEP63 PF17045.5 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.27 11.1 43.5 67 3.2 43.5 3.0 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa YabA PF06156.13 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.35 11.5 42.0 0.077 13.6 8.2 4.1 1 1 3 4 4 4 0 Initiation control protein YabA DUF3450 PF11932.8 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.39 10.0 36.8 0.015 14.6 15.1 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) Fez1 PF06818.15 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.45 10.9 49.1 0.11 13.0 30.3 2.6 1 1 1 2 2 2 0 Fez1 KASH_CCD PF14662.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.66 9.8 52.5 0.041 13.7 29.3 2.8 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DHR10 PF18595.1 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.85 9.7 50.6 0.26 11.4 8.7 3.5 1 1 2 3 3 3 0 Designed helical repeat protein 10 domain TMF_TATA_bd PF12325.8 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 1 9.6 47.9 1.5 9.1 12.9 3.7 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding APG6_N PF17675.1 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 1.3 9.6 57.7 1.8 9.1 30.2 3.0 1 1 2 3 3 3 0 Apg6 coiled-coil region DUF812 PF05667.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 1.3 7.8 50.1 2.1 7.1 50.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF812) TPR_MLP1_2 PF07926.12 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 1.5 8.8 55.7 0.025 14.7 19.4 3.2 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein AAA_13 PF13166.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 2 6.9 43.2 1.6 7.3 41.5 1.5 1 1 0 1 1 1 0 AAA domain HMMR_N PF15905.5 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 2.6 7.4 57.4 2.6 7.4 29.0 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal Lebercilin PF15619.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 2.6 7.7 53.4 0.25 11.0 22.4 2.7 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease SlyX PF04102.12 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 3 8.5 27.0 0.95 10.1 4.8 4.8 2 2 4 6 6 6 0 SlyX HrpB7 PF09486.10 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 3 8.2 22.7 0.055 13.8 10.5 2.9 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) Yuri_gagarin PF15934.5 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 3.4 7.4 30.5 20 4.9 12.8 3.6 1 1 2 3 3 3 0 Yuri gagarin DUF4200 PF13863.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 4 7.9 59.4 1.3 9.4 16.3 4.0 1 1 1 3 3 3 0 Domain of unknown function (DUF4200) DUF4407 PF14362.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 4 6.7 37.0 5.9 6.1 16.3 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF641 PF04859.12 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 4.4 7.7 46.5 1.1 9.6 10.2 4.3 1 1 3 4 4 4 0 Plant protein of unknown function (DUF641) Spc7 PF08317.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 4.5 6.1 53.9 0.052 12.4 23.4 2.8 1 1 2 3 3 3 0 Spc7 kinetochore protein UPF0242 PF06785.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 8.1 6.5 54.5 8.5 6.4 16.7 3.2 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 NODE_32093_length_678_cov_395.009331_g25451_i0forward_frame_3 - 0.007 15.8 2.5 0.009 15.4 2.5 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Spc24 PF08286.11 NODE_32093_length_678_cov_395.009331_g25451_i0forward_frame_2 - 0.0021 18.3 6.0 0.0056 16.9 6.0 1.8 1 0 0 1 1 1 1 Spc24 subunit of Ndc80 APG6_N PF17675.1 NODE_32093_length_678_cov_395.009331_g25451_i0forward_frame_2 - 0.0088 16.6 14.3 0.015 15.8 14.3 1.5 1 0 0 1 1 1 1 Apg6 coiled-coil region UPF0242 PF06785.11 NODE_32093_length_678_cov_395.009331_g25451_i0forward_frame_2 - 0.98 9.5 15.8 1.6 8.8 15.7 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CENP-H PF05837.12 NODE_32093_length_678_cov_395.009331_g25451_i0forward_frame_2 - 3.4 8.1 18.2 0.21 12.0 10.9 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) UPF0449 PF15136.6 NODE_32093_length_678_cov_395.009331_g25451_i0forward_frame_2 - 9.7 6.7 10.9 21 5.7 8.9 2.4 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 COMM_domain PF07258.14 NODE_32084_length_678_cov_4644.944012_g25446_i0reverse_frame_2 - 1.8e-08 34.3 0.0 3.5e-08 33.4 0.0 1.5 1 0 0 1 1 1 1 COMM domain Presenilin PF01080.17 ORF99070 - 0.94 8.2 9.0 0.9 8.2 8.5 1.3 1 1 0 1 1 1 0 Presenilin RNA_pol_Rbc25 PF08292.12 ORF99070 - 1.3 9.2 5.5 0.45 10.7 0.7 2.1 2 0 0 2 2 2 0 RNA polymerase III subunit Rpc25 START PF01852.19 ORF97845 - 3.3e-12 46.3 0.0 4.8e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 START domain DUF3074 PF11274.8 ORF97845 - 0.054 13.5 0.0 0.22 11.5 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3074) Macro PF01661.21 ORF96799 - 3e-10 40.2 0.0 6.6e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Macro domain Peptidase_S74 PF13884.6 ORF96241 - 1.3e-09 38.2 0.1 2.1e-09 37.5 0.1 1.3 1 0 0 1 1 1 1 Chaperone of endosialidase UBA_4 PF14555.6 ORF96017 - 1.2e-06 28.2 0.2 2.1e-06 27.4 0.2 1.4 1 0 0 1 1 1 1 UBA-like domain DUF2244 PF10003.9 ORF89067 - 0.085 12.5 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) Vpu PF00558.19 ORF89067 - 0.35 10.7 3.1 0.75 9.6 3.1 1.6 1 0 0 1 1 1 0 Vpu protein PPR_3 PF13812.6 ORF88262 - 4e-05 23.6 0.0 0.00069 19.6 0.0 2.4 2 1 1 3 3 3 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF88262 - 4.3e-05 23.6 0.0 0.021 15.0 0.0 3.2 1 1 2 3 3 3 2 PPR repeat family PPR_long PF17177.4 ORF88262 - 0.00025 20.5 0.0 0.00037 19.9 0.0 1.3 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 ORF88262 - 0.089 13.1 1.7 28 5.2 0.0 4.2 3 1 0 3 3 3 0 PPR repeat WD40 PF00400.32 ORF8317 - 1.1e-12 48.2 1.2 9.3e-06 26.3 0.0 3.6 4 0 0 4 4 4 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF8317 - 0.03 14.6 0.0 1.2 9.5 0.0 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain PseudoU_synth_2 PF00849.22 ORF82192 - 5.6e-10 39.5 0.0 9.8e-10 38.7 0.0 1.4 1 0 0 1 1 1 1 RNA pseudouridylate synthase EFhand_Ca_insen PF08726.10 ORF82192 - 0.21 11.7 0.0 12 6.1 0.0 2.2 2 0 0 2 2 2 0 Ca2+ insensitive EF hand OEP PF02321.18 ORF80332 - 1.1e-13 51.5 7.4 1.3e-13 51.2 7.4 1.1 1 0 0 1 1 1 1 Outer membrane efflux protein Autoind_bind PF03472.15 ORF80332 - 0.025 14.0 0.0 0.042 13.3 0.0 1.4 1 0 0 1 1 1 0 Autoinducer binding domain GAF PF01590.26 ORF80332 - 0.043 14.4 0.0 0.062 13.9 0.0 1.3 1 0 0 1 1 1 0 GAF domain KIAA1430 PF13879.6 ORF79653 - 0.77 10.6 17.4 13 6.6 17.3 2.4 1 1 0 1 1 1 0 KIAA1430 homologue Asn_synthase PF00733.21 ORF78691 - 1.6e-59 202.4 0.9 6.4e-44 151.1 0.0 2.0 1 1 1 2 2 2 2 Asparagine synthase Stealth_CR4 PF17103.5 ORF78691 - 0.0093 15.8 0.0 6.7 6.7 0.1 2.4 2 0 0 2 2 2 2 Stealth protein CR4, conserved region 4 Rcd1 PF04078.13 ORF77005 - 0.0033 16.8 0.8 0.0049 16.2 0.8 1.2 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like UBA_4 PF14555.6 ORF74974 - 1.1e-05 25.2 0.0 4.5e-05 23.2 0.0 1.9 2 0 0 2 2 2 1 UBA-like domain YMF19 PF02326.15 ORF73130 - 0.062 14.1 0.1 0.062 14.1 0.1 2.5 2 1 1 3 3 3 0 Plant ATP synthase F0 Ctr PF04145.15 ORF73130 - 0.46 11.1 2.8 0.68 10.5 0.1 2.0 1 1 0 2 2 2 0 Ctr copper transporter family DUF996 PF06195.13 ORF71919 - 0.18 12.1 6.4 0.11 12.8 1.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF996) Abhydrolase_9_N PF15420.6 ORF71919 - 0.25 11.3 6.5 0.22 11.5 0.9 2.1 2 0 0 2 2 2 0 Alpha/beta-hydrolase family N-terminus ABC2_membrane_2 PF12679.7 ORF71919 - 0.65 9.2 9.9 0.098 11.9 2.6 2.1 1 1 2 3 3 3 0 ABC-2 family transporter protein Bot1p PF12298.8 ORF70833 - 0.056 13.6 0.0 0.21 11.7 0.0 1.8 2 0 0 2 2 2 0 Eukaryotic mitochondrial regulator protein ArfGap PF01412.18 ORF69654 - 2.7e-25 88.7 0.0 4.6e-25 88.0 0.0 1.4 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf HXXEE PF13787.6 ORF69327 - 0.00012 22.9 2.0 8.6 7.2 0.1 3.6 3 2 0 3 3 3 3 Protein of unknown function with HXXEE motif Cyclin_C PF02984.19 ORF69327 - 0.00081 19.5 5.3 0.87 9.7 0.2 3.4 1 1 1 3 3 3 2 Cyclin, C-terminal domain DSHCT PF08148.12 ORF69327 - 0.0016 18.2 1.7 15 5.2 0.0 4.0 1 1 3 4 4 4 2 DSHCT (NUC185) domain Tom6 PF17112.5 ORF69327 - 0.038 13.5 11.4 21 4.7 0.1 5.2 5 0 0 5 5 5 0 Mitochondrial import receptor subunit Tom6, fungal Integrase_H2C2 PF17921.1 ORF69327 - 0.042 14.0 0.6 73 3.6 0.0 4.2 5 0 0 5 5 5 0 Integrase zinc binding domain NdhN PF11909.8 ORF69327 - 0.067 12.9 0.2 12 5.5 0.0 2.1 2 0 0 2 2 2 0 NADH-quinone oxidoreductase cyanobacterial subunit N Guanylate_kin PF00625.21 ORF68231 - 1e-47 162.2 1.1 2.2e-39 135.0 0.0 2.0 1 1 1 2 2 2 2 Guanylate kinase ATPase_2 PF01637.18 ORF68231 - 0.00018 21.5 0.6 0.00059 19.8 0.0 1.8 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 ORF68231 - 0.00028 20.9 0.1 0.00064 19.7 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF68231 - 0.00028 21.0 0.0 0.00083 19.4 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase NTPase_1 PF03266.15 ORF68231 - 0.0013 18.7 0.1 0.0027 17.6 0.0 1.5 2 0 0 2 2 2 1 NTPase Septin PF00735.18 ORF68231 - 0.0013 18.0 0.0 0.0043 16.4 0.0 1.9 1 1 0 1 1 1 1 Septin AAA_22 PF13401.6 ORF68231 - 0.0032 17.7 0.2 0.0074 16.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF68231 - 0.0044 17.4 0.1 0.0094 16.3 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.6 ORF68231 - 0.0056 17.1 0.4 0.03 14.8 0.0 2.2 2 1 0 2 2 2 1 AAA domain DUF5638 PF18688.1 ORF68231 - 0.0066 16.7 1.4 0.013 15.8 1.4 1.6 1 0 0 1 1 1 1 Family of unknown function (DUF5638) ABC_tran PF00005.27 ORF68231 - 0.01 16.4 0.5 0.026 15.0 0.5 1.9 1 1 0 1 1 1 1 ABC transporter AAA_14 PF13173.6 ORF68231 - 0.015 15.4 0.0 0.036 14.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain MnmE_helical PF12631.7 ORF68231 - 0.028 14.6 0.1 0.042 14.0 0.1 1.4 2 0 0 2 2 2 0 MnmE helical domain NB-ARC PF00931.22 ORF68231 - 0.048 12.8 0.4 0.1 11.8 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain NACHT PF05729.12 ORF68231 - 0.055 13.4 0.1 0.17 11.8 0.1 1.8 2 1 0 2 2 2 0 NACHT domain AAA_7 PF12775.7 ORF68231 - 0.11 12.0 0.0 0.23 11.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_18 PF13238.6 ORF68231 - 0.28 11.7 3.1 4.3 7.9 0.2 2.3 2 1 0 2 2 2 0 AAA domain GST_N_3 PF13417.6 ORF6568 - 4.6e-12 46.2 0.0 9.2e-12 45.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF6568 - 4.9e-09 36.3 0.1 7.8e-09 35.6 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF6568 - 2.3e-08 34.2 0.0 4.4e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF6568 - 1.8e-07 31.3 0.0 2.8e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF6568 - 1.8e-06 28.1 0.0 5.7e-06 26.5 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF6568 - 0.0019 18.2 0.1 0.0046 16.9 0.1 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain DUF1093 PF06486.11 ORF63764 - 0.082 13.6 0.2 0.22 12.2 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1093) MORN PF02493.20 ORF62849 - 1.2e-07 31.2 10.1 0.00059 19.6 3.3 3.6 3 0 0 3 3 3 2 MORN repeat Cytochrom_B561 PF03188.16 ORF6210 - 3.1e-10 40.3 4.1 3.1e-10 40.3 4.1 1.5 1 1 0 1 1 1 1 Eukaryotic cytochrome b561 DUF4079 PF13301.6 ORF6210 - 0.024 14.8 13.6 0.35 11.0 2.8 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4079) MarC PF01914.17 ORF6210 - 0.033 13.6 0.3 0.033 13.6 0.3 2.3 2 1 0 2 2 2 0 MarC family integral membrane protein Sec20 PF03908.13 ORF61568 - 1.1e-06 28.5 1.2 1.1e-06 28.5 1.2 2.5 2 1 0 2 2 2 1 Sec20 Synaptobrevin PF00957.21 ORF61568 - 0.0011 18.7 0.8 0.0011 18.7 0.8 3.3 2 1 2 4 4 4 1 Synaptobrevin HPIH PF13323.6 ORF61568 - 0.0044 16.9 0.1 0.009 15.9 0.1 1.6 1 0 0 1 1 1 1 N-terminal domain with HPIH motif ABC2_membrane_3 PF12698.7 ORF61568 - 0.0083 15.3 5.5 0.02 14.0 5.5 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein DASH_Duo1 PF08651.10 ORF61568 - 0.032 14.0 10.2 0.19 11.6 1.9 3.5 3 1 0 3 3 3 0 DASH complex subunit Duo1 DUF2802 PF10975.8 ORF61568 - 0.034 14.3 0.1 0.034 14.3 0.1 2.9 3 2 0 3 3 2 0 Protein of unknown function (DUF2802) FLILHELTA PF10306.9 ORF61568 - 0.053 13.9 0.9 0.29 11.6 0.1 2.2 2 0 0 2 2 2 0 Hypothetical protein FLILHELTA DUF1786 PF08735.10 ORF61568 - 0.06 12.6 1.4 0.073 12.3 0.3 1.7 2 0 0 2 2 2 0 Putative pyruvate format-lyase activating enzyme (DUF1786) LMBR1 PF04791.16 ORF61568 - 0.087 11.7 8.8 0.1 11.5 8.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein RasGAP_C PF03836.15 ORF61568 - 0.35 11.0 23.1 0.84 9.8 5.2 2.4 1 1 1 2 2 2 0 RasGAP C-terminus DUF1664 PF07889.12 ORF61568 - 0.84 9.7 18.7 0.74 9.9 1.8 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Arrestin_C PF02752.22 ORF61568 - 0.91 10.0 4.8 0.32 11.4 0.9 2.0 1 1 1 2 2 2 0 Arrestin (or S-antigen), C-terminal domain FeoB_associated PF12669.7 ORF61568 - 2.1 8.8 3.3 4 7.9 3.3 1.5 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein DUF2935 PF11155.8 ORF61568 - 2.2 8.7 11.3 0.93 9.8 5.6 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF2935) DUF5089 PF17002.5 ORF61568 - 2.2 8.1 24.8 2.1 8.1 21.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5089) Pex24p PF06398.11 ORF61568 - 2.7 6.9 6.6 28 3.5 6.6 2.1 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin Fzo_mitofusin PF04799.13 ORF61568 - 3.8 7.0 17.2 2.1 7.9 0.3 3.2 1 1 1 3 3 3 0 fzo-like conserved region YtxH PF12732.7 ORF61568 - 5.7 7.5 12.5 5.2e+03 -1.9 12.5 3.6 1 1 0 1 1 1 0 YtxH-like protein Vma12 PF11712.8 ORF61568 - 7.5 6.6 7.4 99 3.0 7.4 2.4 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF724 PF05266.14 ORF61568 - 9.2 6.0 21.8 1.7 8.4 10.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) GST_N_3 PF13417.6 ORF59095 - 4.6e-12 46.2 0.0 9.2e-12 45.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF59095 - 4.9e-09 36.3 0.1 7.8e-09 35.6 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF59095 - 2.3e-08 34.2 0.0 4.4e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF59095 - 1.8e-07 31.3 0.0 2.8e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF59095 - 1.8e-06 28.1 0.0 5.7e-06 26.5 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF59095 - 0.0019 18.2 0.1 0.0046 16.9 0.1 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain PRKG1_interact PF15898.5 ORF55397 - 0.0022 18.9 31.2 0.081 13.8 10.0 2.9 1 1 2 3 3 3 2 cGMP-dependent protein kinase interacting domain HAUS-augmin3 PF14932.6 ORF55397 - 0.01 15.4 12.1 0.01 15.4 12.1 3.0 1 1 2 3 3 3 0 HAUS augmin-like complex subunit 3 SlyX PF04102.12 ORF55397 - 0.022 15.4 8.2 0.022 15.4 8.2 4.0 1 1 3 4 4 4 0 SlyX Syntaxin_2 PF14523.6 ORF55397 - 0.047 14.1 22.4 0.25 11.7 6.3 3.5 1 1 0 3 3 3 0 Syntaxin-like protein TolA_bind_tri PF16331.5 ORF55397 - 0.11 12.6 30.7 1.3 9.1 12.1 3.5 3 1 0 3 3 3 0 TolA binding protein trimerisation GAS PF13851.6 ORF55397 - 0.29 10.5 37.9 0.65 9.3 15.5 3.0 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding MAD PF05557.13 ORF55397 - 0.55 8.5 32.9 0.027 12.8 12.7 2.0 1 1 1 2 2 2 0 Mitotic checkpoint protein DUF547 PF04784.14 ORF55397 - 0.55 10.3 3.2 10 6.2 1.0 2.7 1 1 1 2 2 2 0 Protein of unknown function, DUF547 PKcGMP_CC PF16808.5 ORF55397 - 0.78 9.6 0.0 0.78 9.6 0.0 5.3 4 2 1 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Spc7 PF08317.11 ORF55397 - 1.2 7.9 38.5 1.3 7.8 19.2 2.9 1 1 2 3 3 3 0 Spc7 kinetochore protein Baculo_PEP_C PF04513.12 ORF55397 - 6.5 6.8 7.0 3.3 7.7 2.3 2.4 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus ComP_DUS PF16732.5 ORF55397 - 7.8 7.5 10.5 13 6.7 0.3 3.5 2 1 2 4 4 4 0 Type IV minor pilin ComP, DNA uptake sequence receptor Fez1 PF06818.15 ORF55397 - 8.1 6.9 32.6 11 6.4 13.7 2.1 1 1 1 2 2 2 0 Fez1 UPF0184 PF03670.13 ORF55397 - 9.6 6.7 11.3 0.91 10.0 2.8 3.0 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0184) YMF19 PF02326.15 ORF51095 - 0.062 14.1 0.1 0.062 14.1 0.1 2.5 2 1 1 3 3 3 0 Plant ATP synthase F0 Ctr PF04145.15 ORF51095 - 0.46 11.1 2.8 0.68 10.5 0.1 2.0 1 1 0 2 2 2 0 Ctr copper transporter family MORN PF02493.20 ORF51059 - 2.6e-12 45.9 15.9 0.00063 19.5 1.3 6.3 5 1 0 5 5 5 5 MORN repeat MFS_1 PF07690.16 ORF49641 - 6.7e-13 48.3 14.5 7.6e-13 48.1 14.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Neurensin PF14927.6 ORF4738 - 1.8 8.2 4.8 8.8 6.0 2.5 2.7 2 1 1 3 3 3 0 Neurensin TMF_DNA_bd PF12329.8 ORF47215 - 0.016 15.2 9.9 0.14 12.2 4.7 3.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding HSP70 PF00012.20 ORF47215 - 0.057 11.6 7.5 0.077 11.2 7.5 1.1 1 0 0 1 1 1 0 Hsp70 protein Sugar_transport PF06800.12 ORF46696 - 4.2e-05 23.0 2.2 7.9e-05 22.1 2.2 1.4 1 0 0 1 1 1 1 Sugar transport protein PAP2_3 PF14378.6 ORF46696 - 0.0039 16.9 1.0 0.0093 15.7 1.0 1.6 1 0 0 1 1 1 1 PAP2 superfamily TMEM144 PF07857.12 ORF46696 - 0.0057 15.7 1.6 0.013 14.5 1.6 1.7 1 1 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Ureide_permease PF07168.11 ORF46696 - 0.023 13.5 9.3 0.013 14.3 5.4 1.9 1 1 1 2 2 2 0 Ureide permease DUF1077 PF06417.12 ORF46696 - 0.57 10.2 4.1 8 6.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1077) HAD_2 PF13419.6 ORF44821 - 6e-21 75.3 0.0 8.2e-21 74.9 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF44821 - 2.4e-17 63.9 0.1 5.5e-17 62.8 0.1 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF44821 - 4.2e-12 46.0 0.0 7.7e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 ORF44821 - 1.3e-05 25.7 0.0 1.8e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase FA_hydroxylase PF04116.13 ORF41519 - 3.2e-20 72.8 12.6 4.7e-20 72.3 12.6 1.3 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily 2-oxoacid_dh PF00198.23 ORF4141 - 1.3e-80 270.2 0.0 1.4e-80 270.1 0.0 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Rhamnogal_lyase PF06045.11 ORF4141 - 0.045 13.2 0.1 0.23 10.9 0.1 1.9 1 1 1 2 2 2 0 Rhamnogalacturonate lyase family Lzipper-MIP1 PF14389.6 ORF37524 - 0.039 14.3 1.2 0.039 14.3 1.2 2.1 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 DUF4211 PF13926.6 ORF37524 - 0.043 13.9 0.8 0.068 13.2 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4211) Ferritin-like PF12902.7 ORF37524 - 0.18 11.6 3.6 0.3 10.9 0.7 2.0 1 1 1 2 2 2 0 Ferritin-like Syntaxin PF00804.25 ORF37524 - 0.21 11.3 5.0 2.8 7.5 2.5 2.3 1 1 0 2 2 2 0 Syntaxin DUF4665 PF15679.5 ORF37524 - 0.3 11.7 8.1 0.54 10.9 2.9 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4665) TMF_TATA_bd PF12325.8 ORF37524 - 0.33 11.2 6.7 0.13 12.5 1.1 2.8 4 0 0 4 4 4 0 TATA element modulatory factor 1 TATA binding CHD5 PF04420.14 ORF37524 - 0.4 10.5 1.6 23 4.8 0.0 2.4 2 0 0 2 2 2 0 CHD5-like protein AroM PF07302.11 ORF36487 - 4.7e-71 238.6 0.6 5.3e-71 238.5 0.6 1.0 1 0 0 1 1 1 1 AroM protein Asp_Glu_race PF01177.22 ORF36487 - 0.041 13.7 0.0 0.28 11.0 0.0 2.1 2 1 0 2 2 2 0 Asp/Glu/Hydantoin racemase UPF0180 PF03698.13 ORF36487 - 0.08 13.1 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) Peptidase_M3 PF01432.20 ORF32025 - 3.4e-67 227.7 0.0 3.8e-67 227.5 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 Peptidase_M43 PF05572.13 ORF32025 - 0.15 12.0 0.6 0.25 11.3 0.2 1.6 2 0 0 2 2 2 0 Pregnancy-associated plasma protein-A Peptidase_M50B PF13398.6 ORF32025 - 0.72 9.4 2.0 1.1 8.9 2.0 1.2 1 0 0 1 1 1 0 Peptidase M50B-like EF-G-binding_N PF07299.11 ORF31754 - 0.048 14.2 1.5 0.14 12.7 1.5 1.8 1 0 0 1 1 1 0 Elongation factor G-binding protein, N-terminal GerE PF00196.19 ORF31513 - 9.1e-16 57.2 0.1 1.7e-15 56.3 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_38 PF13936.6 ORF31513 - 2.5e-05 23.9 0.6 5.4e-05 22.9 0.6 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 ORF31513 - 0.0018 17.9 0.0 0.0037 16.9 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 ORF31513 - 0.0035 16.8 0.1 0.0082 15.6 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 ORF31513 - 0.083 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain Terminase_5 PF06056.12 ORF31513 - 0.13 12.2 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) MORN PF02493.20 ORF30883 - 3.2e-26 89.6 32.2 7.2e-07 28.7 0.4 7.7 7 1 0 7 7 7 5 MORN repeat PDEase_I PF00233.19 ORF26693 - 5e-41 141.0 0.2 6.4e-41 140.6 0.2 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase FAA_hydrolase_N PF09298.11 ORF26693 - 8.8e-05 22.7 0.5 0.0012 19.0 0.1 2.7 3 1 0 3 3 3 1 Fumarylacetoacetase N-terminal DUF3417 PF11897.8 ORF26693 - 0.013 16.0 0.3 0.03 14.8 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3417) CdiI_2 PF18593.1 ORF26693 - 0.08 13.6 0.0 0.14 12.8 0.0 1.4 1 0 0 1 1 1 0 CdiI immunity protein ChaC PF04752.12 ORF21446 - 1.8e-47 161.7 0.0 2.2e-47 161.4 0.0 1.1 1 0 0 1 1 1 1 ChaC-like protein GGACT PF06094.12 ORF21446 - 6.5e-05 23.5 0.1 0.00011 22.8 0.1 1.4 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like DHHC PF01529.20 ORF21313 - 2.4e-18 66.6 7.3 2.4e-18 66.6 7.3 1.8 2 0 0 2 2 2 1 DHHC palmitoyltransferase Antigen_Bd37 PF11641.8 ORF20572 - 0.029 13.9 0.0 0.038 13.5 0.0 1.3 1 0 0 1 1 1 0 Glycosylphosphatidylinositol-anchored merozoite surface protein DUF1878 PF08963.10 ORF20572 - 0.075 13.5 0.7 0.19 12.2 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1878) Nitrate_red_gam PF02665.14 ORF19708 - 4e-79 265.2 10.0 4.6e-79 265.0 10.0 1.0 1 0 0 1 1 1 1 Nitrate reductase gamma subunit DUF2407_C PF13373.6 ORF19708 - 0.14 12.4 0.2 0.26 11.5 0.2 1.5 1 0 0 1 1 1 0 DUF2407 C-terminal domain Claudin_2 PF13903.6 ORF19708 - 8.3 6.1 8.3 1.1 9.0 1.2 2.2 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction PUB PF09409.10 ORF16742 - 5.8e-14 51.8 0.0 9.4e-14 51.1 0.0 1.4 1 0 0 1 1 1 1 PUB domain ABATE PF07336.11 ORF16742 - 1.3 9.7 9.6 0.13 12.9 3.5 2.1 1 1 2 3 3 3 0 Putative stress-induced transcription regulator Nop14 PF04147.12 ORF110779 - 1.7e-08 33.3 8.3 1.7e-08 33.3 8.3 2.0 1 1 1 2 2 2 1 Nop14-like family FAM184 PF15665.5 ORF110779 - 0.063 13.0 14.7 0.12 12.2 14.7 1.4 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B FapA PF03961.13 ORF110779 - 0.37 9.3 7.0 0.5 8.9 7.0 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A 5_nucleotid PF05761.14 ORF110779 - 0.38 9.6 7.7 0.51 9.2 7.7 1.1 1 0 0 1 1 1 0 5' nucleotidase family Zein-binding PF04576.15 ORF110779 - 1.1 9.6 12.9 3.1 8.1 12.9 1.8 1 1 0 1 1 1 0 Zein-binding Peptidase_A24 PF01478.18 ORF110697 - 6.4e-29 100.5 10.0 6.4e-29 100.5 10.0 2.4 1 1 1 2 2 2 1 Type IV leader peptidase family SPC12 PF06645.13 ORF110697 - 2.2 8.5 16.8 0.33 11.1 0.7 3.9 2 1 2 4 4 4 0 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF1093 PF06486.11 ORF109766 - 0.07 13.8 0.1 0.2 12.4 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1093) Acyl-CoA_dh_1 PF00441.24 ORF109730 - 4.3e-36 124.4 2.5 6e-36 123.9 2.5 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF109730 - 4.4e-09 36.7 0.9 6.5e-09 36.2 0.9 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF109730 - 0.00018 21.7 0.1 0.00094 19.3 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain GST_N_3 PF13417.6 ORF108365 - 4.6e-12 46.2 0.0 9.2e-12 45.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF108365 - 4.9e-09 36.3 0.1 7.8e-09 35.6 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF108365 - 2.3e-08 34.2 0.0 4.4e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF108365 - 1.8e-07 31.3 0.0 2.8e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF108365 - 1.8e-06 28.1 0.0 5.7e-06 26.5 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF108365 - 0.0019 18.2 0.1 0.0046 16.9 0.1 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain mIF3 PF14877.6 ORF107963 - 0.016 14.9 0.8 0.016 14.9 0.8 1.8 2 0 0 2 2 2 0 Mitochondrial translation initiation factor CooT PF10133.9 ORF107963 - 0.046 14.0 0.1 0.14 12.4 0.1 1.8 1 0 0 1 1 1 0 CO dehydrogenase accessory protein CooT LRR_1 PF00560.33 ORF107963 - 0.2 12.3 0.8 1.3 9.9 0.1 2.7 3 0 0 3 3 3 0 Leucine Rich Repeat GrpE PF01025.19 ORF107963 - 0.67 9.6 4.6 0.18 11.4 1.7 1.6 2 0 0 2 2 2 0 GrpE WD40 PF00400.32 ORF106157 - 2e-08 34.7 0.4 0.0035 18.2 0.0 4.3 3 1 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF106157 - 0.12 12.7 0.0 0.48 10.8 0.0 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain MBOAT PF03062.19 ORF105394 - 1.5e-06 27.9 6.9 1.6e-06 27.7 5.8 1.7 1 1 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family PMR5N PF14416.6 ORF103723 - 0.035 14.4 0.2 0.035 14.4 0.2 2.7 3 0 0 3 3 3 0 PMR5 N terminal Domain Stc1 PF12898.7 ORF103723 - 0.18 12.3 7.4 0.045 14.3 3.5 2.0 2 1 0 2 2 2 0 Stc1 domain Lambda_CIII PF02061.16 ORF102618 - 0.046 13.8 0.2 0.12 12.4 0.0 1.8 2 0 0 2 2 2 0 Lambda Phage CIII DUF485 PF04341.12 ORF102396 - 0.32 11.0 6.8 0.73 9.8 6.8 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF485 ARL2_Bind_BART PF11527.8 ORF102176 - 3.9e-06 27.0 0.1 6.7e-06 26.2 0.1 1.3 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART SKI PF01202.22 ORF102062 - 2.1e-56 190.4 0.5 2.7e-56 190.1 0.5 1.1 1 0 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 ORF102062 - 1e-08 35.5 0.0 5.6e-06 26.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF102062 - 9.2e-08 32.7 0.0 1.4e-07 32.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 ORF102062 - 6.5e-06 26.4 0.2 0.00011 22.4 0.2 2.4 1 1 0 1 1 1 1 Cytidylate kinase-like family Cytidylate_kin PF02224.18 ORF102062 - 2.8e-05 24.0 0.3 0.00022 21.0 0.0 2.3 2 1 1 3 3 3 1 Cytidylate kinase dNK PF01712.19 ORF102062 - 3.6e-05 23.7 0.1 0.033 14.0 0.0 2.2 2 0 0 2 2 2 2 Deoxynucleoside kinase TsaE PF02367.17 ORF102062 - 0.00038 20.4 0.0 0.00075 19.5 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 ORF102062 - 0.00046 20.6 0.1 0.001 19.5 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 ORF102062 - 0.0014 19.0 0.0 0.0035 17.8 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF102062 - 0.0023 18.2 0.0 0.0035 17.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_7 PF12775.7 ORF102062 - 0.0032 17.0 0.0 0.0062 16.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region ABC_tran PF00005.27 ORF102062 - 0.0035 17.9 0.2 0.0072 16.8 0.2 1.8 1 1 0 1 1 1 1 ABC transporter APS_kinase PF01583.20 ORF102062 - 0.0042 17.0 0.1 0.0089 15.9 0.1 1.5 1 1 0 1 1 1 1 Adenylylsulphate kinase RsgA_GTPase PF03193.16 ORF102062 - 0.0089 16.0 0.0 0.018 15.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase IstB_IS21 PF01695.17 ORF102062 - 0.0094 15.7 0.0 0.017 14.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein His_biosynth PF00977.21 ORF102062 - 0.01 15.3 0.1 0.014 14.8 0.1 1.2 1 0 0 1 1 1 0 Histidine biosynthesis protein AAA_PrkA PF08298.11 ORF102062 - 0.011 14.6 0.0 0.021 13.8 0.0 1.4 1 0 0 1 1 1 0 PrkA AAA domain AAA_5 PF07728.14 ORF102062 - 0.013 15.5 0.0 0.034 14.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Ploopntkinase3 PF18751.1 ORF102062 - 0.017 15.0 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_17 PF13207.6 ORF102062 - 0.019 15.4 2.6 0.09 13.2 1.2 2.7 1 1 1 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF102062 - 0.023 15.1 0.0 0.047 14.1 0.0 1.6 1 0 0 1 1 1 0 RNA helicase AAA_25 PF13481.6 ORF102062 - 0.023 14.2 0.2 0.12 12.0 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF102062 - 0.028 14.2 0.1 0.053 13.3 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain G-alpha PF00503.20 ORF102062 - 0.028 13.6 0.1 0.045 12.9 0.1 1.3 1 0 0 1 1 1 0 G-protein alpha subunit TniB PF05621.11 ORF102062 - 0.042 13.3 0.2 0.35 10.3 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein PduV-EutP PF10662.9 ORF102062 - 0.05 13.4 0.0 0.17 11.6 0.0 1.8 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_28 PF13521.6 ORF102062 - 0.057 13.6 0.0 0.3 11.3 0.0 2.1 2 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF102062 - 0.075 12.3 0.0 0.21 10.9 0.0 1.7 1 0 0 1 1 1 0 Zeta toxin Mg_chelatase PF01078.21 ORF102062 - 0.095 12.1 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF102062 - 0.12 12.0 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 ORF102062 - 0.14 12.1 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain SRTM1 PF15872.5 NODE_32476_length_670_cov_2.554331_g25790_i0forward_frame_1 - 5.6 7.2 7.0 4.8 7.4 0.1 2.4 3 0 0 3 3 3 0 Serine-rich and transmembrane domain-containing protein 1 PAAR_motif PF05488.13 NODE_32474_length_670_cov_3.114961_g25788_i0forward_frame_1 - 0.0093 16.1 0.0 0.015 15.4 0.0 1.4 1 0 0 1 1 1 1 PAAR motif Zip PF02535.22 NODE_32457_length_670_cov_173.656693_g25771_i0forward_frame_1 - 0.99 8.6 5.6 1.2 8.3 5.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Sporozoite_P67 PF05642.11 NODE_32457_length_670_cov_173.656693_g25771_i0forward_frame_1 - 1.2 7.1 7.4 1.6 6.7 7.4 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Spot_14 PF07084.12 NODE_32457_length_670_cov_173.656693_g25771_i0forward_frame_1 - 1.3 9.1 8.1 2.2 8.4 8.1 1.4 1 0 0 1 1 1 0 Thyroid hormone-inducible hepatic protein Spot 14 Glyco_transf_18 PF15024.6 NODE_32449_length_670_cov_334.108661_g25764_i0reverse_frame_1 - 6.3e-06 25.1 5.9 7.7e-06 24.8 5.9 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 18 DUF5586 PF17824.1 NODE_32445_length_670_cov_495.195276_g25760_i0forward_frame_1 - 0.034 13.3 2.2 0.044 12.9 2.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5586) PATR PF12951.7 NODE_32436_length_671_cov_2.751572_g25753_i0forward_frame_1 - 0.00013 22.0 3.7 0.012 15.7 0.8 3.4 2 1 1 3 3 3 2 Passenger-associated-transport-repeat Flagellin_D3 PF08884.11 NODE_32436_length_671_cov_2.751572_g25753_i0forward_frame_1 - 0.051 14.0 0.7 0.14 12.6 0.2 2.1 2 0 0 2 2 2 0 Flagellin D3 domain IFRD_C PF04836.12 NODE_32431_length_671_cov_51.844340_g25749_i0forward_frame_1 - 0.21 12.2 0.1 0.21 12.2 0.1 2.6 3 0 0 3 3 3 0 Interferon-related protein conserved region BDV_M PF16520.5 NODE_32429_length_671_cov_66.331761_g25747_i0forward_frame_1 - 0.18 12.2 2.1 0.54 10.7 0.4 2.1 2 0 0 2 2 2 0 ssRNA-binding matrix protein of Bornaviridae His_Me_b4a2 PF18275.1 NODE_32392_length_672_cov_1.987441_g25716_i0forward_frame_1 - 0.032 14.3 1.7 0.079 13.0 1.7 1.6 1 0 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain LRR_6 PF13516.6 NODE_32388_length_672_cov_5.221350_g25712_i0forward_frame_1 - 2e-13 49.2 21.6 3.3e-05 23.6 0.2 7.2 8 0 0 8 8 8 4 Leucine Rich repeat LRR_4 PF12799.7 NODE_32388_length_672_cov_5.221350_g25712_i0forward_frame_1 - 0.00046 20.5 23.2 0.12 12.8 3.5 5.4 2 2 2 4 4 4 3 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_32388_length_672_cov_5.221350_g25712_i0forward_frame_1 - 0.023 15.2 13.5 5.6 7.9 0.1 6.1 7 1 0 7 7 7 0 Leucine Rich Repeat LRR_8 PF13855.6 NODE_32388_length_672_cov_5.221350_g25712_i0forward_frame_1 - 0.088 12.6 22.8 0.53 10.1 0.8 5.9 2 2 2 4 4 4 0 Leucine rich repeat Suppressor_P21 PF11479.8 NODE_32365_length_672_cov_303.125589_g25691_i0reverse_frame_1 - 0.0091 16.2 0.3 0.038 14.2 0.1 2.0 2 0 0 2 2 2 1 RNA silencing suppressor P21 C-terminal domain BOP1NT PF08145.12 NODE_32365_length_672_cov_303.125589_g25691_i0forward_frame_1 - 0.12 12.2 0.2 0.19 11.6 0.2 1.2 1 0 0 1 1 1 0 BOP1NT (NUC169) domain DUF5465 PF17553.2 NODE_32344_length_673_cov_49.829154_g25673_i0reverse_frame_2 - 6.9 7.5 5.6 1.8 9.3 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5465) DUF294 PF03445.13 NODE_32344_length_673_cov_49.829154_g25673_i0forward_frame_2 - 0.19 11.5 0.0 0.28 11.0 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 GTP_EFTU_D2 PF03144.25 NODE_32313_length_674_cov_2.117371_g25646_i0reverse_frame_3 - 4.1e-13 49.5 0.3 5.8e-13 49.0 0.3 1.2 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 NODE_32313_length_674_cov_2.117371_g25646_i0reverse_frame_3 - 3.8e-05 23.7 0.0 0.00013 22.0 0.0 1.8 1 1 0 1 1 1 1 Elongation Factor G, domain II RF3_C PF16658.5 NODE_32313_length_674_cov_2.117371_g25646_i0reverse_frame_3 - 0.0043 16.9 0.0 0.0059 16.4 0.0 1.2 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain Lamprin PF06403.11 NODE_32312_length_674_cov_2.827856_g25645_i0reverse_frame_3 - 0.07 13.1 0.5 0.12 12.3 0.1 1.5 1 1 0 1 1 1 0 Lamprin zf-H2C2_2 PF13465.6 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 2.9e-08 33.8 6.8 1.3e-06 28.5 0.2 3.7 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.033 14.7 11.4 1.6 9.4 0.1 4.6 4 0 0 4 4 4 0 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.055 13.5 1.5 0.055 13.5 1.5 3.0 3 0 0 3 3 3 0 C2H2-type zinc finger zf-C2H2_4 PF13894.6 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.75 10.8 0.2 0.75 10.8 0.2 4.2 5 0 0 5 5 5 0 C2H2-type zinc finger zf-H2C2_5 PF13909.6 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 1.7 8.5 14.6 4.8 7.0 0.4 3.7 4 0 0 4 4 4 0 C2H2-type zinc-finger domain zf-C2H2 PF00096.26 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_2 - 0.11 13.0 0.6 0.26 11.8 0.6 1.6 1 0 0 1 1 1 0 Zinc finger, C2H2 type RCC1_2 PF13540.6 NODE_32304_length_674_cov_71.377152_g25638_i0reverse_frame_2 - 1.6e-15 56.5 5.9 0.023 14.5 0.1 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat FtsQ PF03799.15 NODE_32304_length_674_cov_71.377152_g25638_i0reverse_frame_2 - 8.9e-07 29.7 0.0 2.8 8.8 0.0 4.4 1 1 4 5 5 5 3 Cell division protein FtsQ Spectrin PF00435.21 NODE_32304_length_674_cov_71.377152_g25638_i0reverse_frame_2 - 0.00035 21.0 0.5 5.8 7.5 0.0 4.4 4 1 1 5 5 5 1 Spectrin repeat PH_TFIIH PF08567.11 NODE_32304_length_674_cov_71.377152_g25638_i0reverse_frame_2 - 0.00067 19.9 0.1 3.3 8.1 0.0 4.0 1 1 3 4 4 4 1 TFIIH p62 subunit, N-terminal domain PhnH PF05845.12 NODE_32304_length_674_cov_71.377152_g25638_i0reverse_frame_2 - 0.0014 18.4 0.2 1.8 8.3 0.0 2.7 1 1 2 3 3 3 2 Bacterial phosphonate metabolism protein (PhnH) DUF1120 PF06551.12 NODE_32304_length_674_cov_71.377152_g25638_i0reverse_frame_2 - 0.015 15.5 2.3 20 5.4 0.0 4.3 2 2 3 5 5 5 0 Protein of unknown function (DUF1120) MaoC_dehydrat_N PF13452.6 NODE_32304_length_674_cov_71.377152_g25638_i0reverse_frame_2 - 0.021 15.0 0.2 0.85 9.8 0.0 2.6 2 1 1 3 3 3 0 N-terminal half of MaoC dehydratase mTERF PF02536.14 NODE_32302_length_674_cov_86.704225_g21650_i1reverse_frame_2 - 8.3e-29 100.5 0.0 1.1e-28 100.1 0.0 1.1 1 0 0 1 1 1 1 mTERF DUF4743 PF15916.5 NODE_32302_length_674_cov_86.704225_g21650_i1reverse_frame_2 - 0.00016 21.6 0.2 0.82 9.6 0.0 3.1 1 1 2 3 3 3 3 Domain of unknown function (DUF4743) DUF1127 PF06568.11 NODE_32302_length_674_cov_86.704225_g21650_i1reverse_frame_2 - 0.00018 21.1 0.0 5.9 6.7 0.0 3.3 3 0 0 3 3 3 3 Domain of unknown function (DUF1127) Ring_hydroxyl_A PF00848.19 NODE_32302_length_674_cov_86.704225_g21650_i1forward_frame_3 - 0.029 14.3 0.4 3.4 7.6 0.0 2.5 2 1 1 3 3 3 0 Ring hydroxylating alpha subunit (catalytic domain) Sulfakinin PF08257.11 NODE_32302_length_674_cov_86.704225_g21650_i1forward_frame_2 - 7.4 7.0 10.4 1.5e+02 3.0 0.4 4.6 4 0 0 4 4 4 0 Sulfakinin family MyTH4 PF00784.17 NODE_32227_length_675_cov_198.818750_g25566_i0reverse_frame_2 - 0.0011 19.4 2.6 0.49 10.9 0.2 2.3 1 1 1 2 2 2 2 MyTH4 domain DUF3864 PF12980.7 NODE_32227_length_675_cov_198.818750_g25566_i0reverse_frame_2 - 0.23 11.8 3.1 4.6 7.6 0.1 2.8 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3864) Chromo_shadow PF01393.19 NODE_32222_length_675_cov_346.381250_g25562_i0reverse_frame_3 - 1.2e-06 28.5 0.3 3.2e-06 27.1 0.1 1.9 2 0 0 2 2 2 1 Chromo shadow domain Chromo PF00385.24 NODE_32222_length_675_cov_346.381250_g25562_i0reverse_frame_2 - 7.8e-13 48.1 0.7 1.3e-12 47.4 0.7 1.4 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain DUF4719 PF15843.5 NODE_32222_length_675_cov_346.381250_g25562_i0forward_frame_2 - 0.12 12.5 2.6 0.19 11.9 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) DUF4293 PF14126.6 ORF98957 - 0.27 11.5 4.2 0.39 10.9 4.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4293) DPM3 PF08285.11 ORF98957 - 3.8 7.8 6.5 1.5 9.1 1.4 2.6 2 1 1 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) FYVE PF01363.21 ORF98916 - 0.0011 19.1 0.7 0.0017 18.4 0.7 1.4 1 0 0 1 1 1 1 FYVE zinc finger ubiquitin PF00240.23 ORF98916 - 0.0045 16.7 0.0 0.21 11.4 0.0 2.4 2 0 0 2 2 2 1 Ubiquitin family PCP_red PF08369.10 ORF98916 - 0.059 13.6 0.1 0.22 11.8 0.0 2.0 2 0 0 2 2 2 0 Proto-chlorophyllide reductase 57 kD subunit ZZ PF00569.17 ORF98916 - 0.14 12.0 6.0 0.25 11.2 6.0 1.4 1 0 0 1 1 1 0 Zinc finger, ZZ type DUF3089 PF11288.8 ORF97003 - 2.2e-06 27.4 0.0 2.9e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3089) Peptidase_M15_2 PF05951.13 ORF90288 - 0.0073 16.0 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF882) EamA PF00892.20 ORF90002 - 1.1e-09 38.6 3.5 1.3e-09 38.3 3.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family UBA PF00627.31 ORF90002 - 0.052 13.5 0.0 0.09 12.7 0.0 1.4 1 0 0 1 1 1 0 UBA/TS-N domain Voltage_CLC PF00654.20 ORF89590 - 9.6e-09 34.9 9.1 9.6e-09 34.9 9.1 1.8 1 1 1 2 2 2 1 Voltage gated chloride channel DUF1453 PF07301.11 ORF89590 - 1.4 9.0 7.6 2.3 8.2 0.6 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF1453) Asp PF00026.23 ORF89560 - 1.4e-15 57.5 0.2 1.7e-15 57.2 0.2 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF89560 - 0.0019 18.0 0.0 0.0038 17.0 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal DUF4217 PF13959.6 ORF8842 - 8.4e-16 58.0 0.0 1.9e-15 56.8 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) DUF4228 PF14009.6 ORF8842 - 2.2 8.6 11.5 6.9 7.0 11.5 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4228) DUF2207 PF09972.9 ORF88093 - 4.5 5.9 7.0 13 4.4 5.2 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) START PF01852.19 ORF8679 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF8679 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) AAA_5 PF07728.14 ORF86374 - 1.1e-08 35.1 0.0 1.5e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Dynein_AAA_lid PF17852.1 ORF86374 - 9.3e-05 22.5 0.1 0.00017 21.7 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_6 PF12774.7 ORF86374 - 0.0003 19.9 0.1 0.00049 19.2 0.1 1.4 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region Mg_chelatase PF01078.21 ORF86374 - 0.004 16.6 0.1 0.016 14.6 0.0 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 ORF86374 - 0.019 15.3 0.0 0.032 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain DEAD PF00270.29 ORF86374 - 0.036 13.8 0.0 0.045 13.5 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase AAA_7 PF12775.7 ORF86374 - 0.093 12.2 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Kinesin PF00225.23 ORF8625 - 0.0028 16.7 0.1 0.0054 15.7 0.1 1.5 1 0 0 1 1 1 1 Kinesin motor domain WHEP-TRS PF00458.20 ORF8625 - 0.013 15.6 1.7 0.031 14.4 1.7 1.6 1 0 0 1 1 1 0 WHEP-TRS domain Senescence_reg PF04520.13 ORF8625 - 0.02 15.8 0.9 0.023 15.5 0.9 1.3 1 0 0 1 1 1 0 Senescence regulator Pkinase_Tyr PF07714.17 ORF86020 - 6.9e-29 100.9 0.1 8.2e-29 100.7 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF86020 - 1.9e-23 83.2 0.6 2.1e-23 83.1 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF86020 - 0.011 15.0 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 0 Kinase-like TP_methylase PF00590.20 ORF85731 - 0.0041 17.1 0.3 0.0098 15.9 0.1 1.7 2 1 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases gpD PF02925.16 ORF85731 - 0.01 15.8 0.1 0.017 15.1 0.1 1.3 1 0 0 1 1 1 0 Bacteriophage scaffolding protein D MazG PF03819.17 ORF85731 - 0.089 13.0 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 MazG nucleotide pyrophosphohydrolase domain ASC PF00858.24 ORF84857 - 0.01 14.9 0.0 0.015 14.3 0.0 1.2 1 0 0 1 1 1 1 Amiloride-sensitive sodium channel CRAL_TRIO PF00650.20 ORF83670 - 3.3e-11 43.2 0.0 4.4e-11 42.7 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain START PF01852.19 ORF8152 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF8152 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) DUF2867 PF11066.8 ORF81302 - 0.14 12.4 0.3 0.2 12.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2867) AAR2 PF05282.11 ORF81302 - 0.16 11.4 6.2 0.18 11.2 6.2 1.2 1 0 0 1 1 1 0 AAR2 protein ArAE_2_N PF10337.9 ORF81302 - 0.19 10.7 3.7 0.25 10.3 3.7 1.2 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal BUD22 PF09073.10 ORF81302 - 0.63 9.3 27.7 0.72 9.1 27.7 1.1 1 0 0 1 1 1 0 BUD22 Raftlin PF15250.6 ORF81302 - 1.3 7.7 10.3 1.7 7.3 10.3 1.2 1 0 0 1 1 1 0 Raftlin OrfB_IS605 PF01385.19 ORF78029 - 1.5e-28 99.4 1.4 2.4e-28 98.8 1.4 1.3 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 ORF78029 - 7.6e-25 86.6 1.5 9.6e-25 86.3 0.3 1.8 2 0 0 2 2 2 1 Putative transposase DNA-binding domain RuvC_1 PF18516.1 ORF78029 - 0.0029 16.9 0.5 0.076 12.2 0.3 2.1 2 0 0 2 2 2 1 RuvC nuclease domain HypA PF01155.19 ORF78029 - 0.0072 16.3 0.2 0.014 15.4 0.2 1.7 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ima1_N PF09779.9 ORF78029 - 0.013 16.4 3.0 0.014 16.3 0.5 2.0 2 0 0 2 2 2 0 Ima1 N-terminal domain Ntox28 PF15605.6 ORF78029 - 0.016 15.4 0.1 0.033 14.4 0.1 1.5 1 0 0 1 1 1 0 Bacterial toxin 28 Zn_Tnp_IS1595 PF12760.7 ORF78029 - 0.026 14.5 2.3 0.048 13.7 2.3 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain C1_1 PF00130.22 ORF78029 - 0.047 13.6 0.7 0.095 12.6 0.7 1.5 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Tnp_zf-ribbon_2 PF13842.6 ORF78029 - 0.056 14.3 2.9 0.15 12.9 2.9 1.7 1 0 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon PriA_CRR PF18319.1 ORF78029 - 0.078 13.0 3.8 5.1 7.2 0.9 2.5 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain Curto_V2 PF07325.11 ORF78029 - 0.15 12.0 0.1 0.32 10.9 0.1 1.6 1 1 1 2 2 2 0 Curtovirus V2 protein Rubredoxin_2 PF18073.1 ORF78029 - 0.87 9.4 6.0 1 9.1 0.8 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain DNA_RNApol_7kD PF03604.13 ORF78029 - 1.4 8.7 4.4 9.4 6.0 4.5 2.2 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.6 ORF78029 - 3.7 7.4 5.0 19 5.1 0.5 2.8 3 0 0 3 3 3 0 zinc-ribbon domain TFA2_Winged_2 PF18121.1 ORF77940 - 0.042 13.5 0.3 0.13 11.9 0.2 2.0 1 1 1 2 2 2 0 TFA2 Winged helix domain 2 CarbopepD_reg_2 PF13715.6 ORF77940 - 0.12 12.4 0.6 0.12 12.4 0.6 2.1 2 0 0 2 2 2 0 CarboxypepD_reg-like domain DUF2867 PF11066.8 ORF75059 - 0.14 12.4 0.3 0.2 12.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2867) AAR2 PF05282.11 ORF75059 - 0.16 11.4 6.2 0.18 11.2 6.2 1.2 1 0 0 1 1 1 0 AAR2 protein ArAE_2_N PF10337.9 ORF75059 - 0.19 10.7 3.7 0.25 10.3 3.7 1.2 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal BUD22 PF09073.10 ORF75059 - 0.63 9.3 27.7 0.72 9.1 27.7 1.1 1 0 0 1 1 1 0 BUD22 Raftlin PF15250.6 ORF75059 - 1.3 7.7 10.3 1.7 7.3 10.3 1.2 1 0 0 1 1 1 0 Raftlin Lactamase_B_2 PF12706.7 ORF74917 - 1.8e-09 37.4 0.0 4.3e-07 29.7 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain SHIPPO-rpt PF07004.12 ORF7453 - 4.8e-13 49.4 44.5 0.0033 18.3 0.0 6.8 6 2 0 6 6 6 5 Sperm-tail PG-rich repeat ECR1_N PF14382.6 ORF7453 - 0.005 16.6 0.6 1 9.2 0.0 3.9 5 0 0 5 5 5 1 Exosome complex exonuclease RRP4 N-terminal region Croc_4 PF17691.1 ORF7453 - 0.1 12.7 0.5 0.23 11.5 0.0 1.8 2 0 0 2 2 2 0 Contingent replication of cDNA 4 SH3_1 PF00018.28 ORF7448 - 5.1e-08 32.4 0.2 8.8e-08 31.6 0.2 1.4 1 0 0 1 1 1 1 SH3 domain DUF4524 PF15025.6 ORF7448 - 0.00044 20.0 0.0 0.00067 19.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4524) SH3_2 PF07653.17 ORF7448 - 0.0054 16.4 0.0 0.011 15.4 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain SH3_9 PF14604.6 ORF7448 - 0.05 13.5 0.0 0.083 12.8 0.0 1.3 1 0 0 1 1 1 0 Variant SH3 domain KIP1 PF07765.12 ORF7448 - 0.2 11.8 0.0 0.35 11.0 0.0 1.3 1 0 0 1 1 1 0 KIP1-like protein DUF5522 PF17653.1 ORF73264 - 0.082 12.9 1.1 0.18 11.8 1.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5522) Mst1_SARAH PF11629.8 ORF71417 - 0.025 14.6 1.2 0.025 14.6 1.2 2.6 2 0 0 2 2 2 0 C terminal SARAH domain of Mst1 Tam41_Mmp37 PF09139.11 ORF71417 - 0.12 11.8 9.2 0.17 11.3 9.2 1.1 1 0 0 1 1 1 0 Phosphatidate cytidylyltransferase, mitochondrial Glyco_H_20C_C PF18088.1 ORF71417 - 0.21 11.4 8.5 0.25 11.2 8.0 1.4 1 1 0 1 1 1 0 Glycoside Hydrolase 20C C-terminal domain DUF2362 PF10154.9 ORF71417 - 0.23 10.4 11.5 0.27 10.2 11.5 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2362) COG5 PF10392.9 ORF71417 - 0.32 11.2 9.5 1.5 9.0 9.4 2.2 1 1 0 1 1 1 0 Golgi transport complex subunit 5 GREB1 PF15782.5 ORF71417 - 0.33 8.0 8.3 0.38 7.8 8.3 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Endotoxin_N PF03945.14 ORF71417 - 0.47 10.1 7.1 0.5 10.0 6.0 1.5 1 1 0 1 1 1 0 delta endotoxin, N-terminal domain DUF1664 PF07889.12 ORF71417 - 0.56 10.2 13.2 0.97 9.5 8.8 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) NAD_binding_6 PF08030.12 ORF71417 - 2.5 8.2 6.2 4.1 7.5 6.2 1.4 1 0 0 1 1 1 0 Ferric reductase NAD binding domain DUF853 PF05872.12 ORF71417 - 3.4 6.2 10.0 4.4 5.8 10.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) ARGLU PF15346.6 ORF71417 - 3.5 7.5 28.3 7.3 6.4 28.3 1.5 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 CSD PF00313.22 ORF71388 - 1.8e-06 27.7 0.0 3.5e-06 26.8 0.0 1.5 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF71388 - 0.00018 21.1 0.0 0.00032 20.3 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF11 PF01345.18 ORF71388 - 0.099 13.0 0.0 0.15 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF11 ADP_ribosyl_GH PF03747.14 ORF68637 - 8e-29 101.3 0.0 1.1e-28 100.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase 4HBT_3 PF13622.6 ORF68454 - 2.7e-29 103.2 3.1 3.1e-29 102.9 3.1 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl_CoA_thio PF02551.15 ORF68454 - 4.6e-24 84.8 0.1 6.2e-24 84.3 0.1 1.1 1 0 0 1 1 1 1 Acyl-CoA thioesterase FAD_binding_3 PF01494.19 ORF68133 - 0.061 12.6 0.1 0.43 9.8 0.0 1.9 1 1 1 2 2 2 0 FAD binding domain Folate_carrier PF01770.18 ORF67933 - 0.12 11.1 1.7 0.12 11.0 0.1 1.6 1 1 1 2 2 2 0 Reduced folate carrier Neur_chan_memb PF02932.16 ORF67520 - 0.38 10.8 5.3 0.46 10.5 5.3 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4217 PF13959.6 ORF66397 - 8.4e-16 58.0 0.0 1.9e-15 56.8 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) DUF4228 PF14009.6 ORF66397 - 2.2 8.6 11.5 6.9 7.0 11.5 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4228) START PF01852.19 ORF66225 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF66225 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) Acyl-CoA_dh_1 PF00441.24 ORF65818 - 2.9e-06 27.5 0.1 4.7e-06 26.9 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF65818 - 0.092 13.0 0.2 0.29 11.4 0.0 1.8 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain Peptidase_M16_C PF05193.21 ORF59991 - 4.6e-17 62.6 0.0 7e-17 62.0 0.0 1.2 1 0 0 1 1 1 1 Peptidase M16 inactive domain PBP PF01161.20 ORF58963 - 0.0023 18.3 0.0 0.0034 17.7 0.0 1.3 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein LSM PF01423.22 ORF58 - 3.7e-16 58.6 0.0 5.2e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 LSM domain START PF01852.19 ORF57825 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF57825 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) RIFIN PF02009.16 ORF56739 - 0.00071 19.6 0.9 0.0011 19.0 0.1 1.6 2 0 0 2 2 2 1 Rifin DUF4293 PF14126.6 ORF56739 - 0.007 16.6 7.4 0.018 15.3 7.4 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4293) Bac_export_2 PF01312.19 ORF56739 - 0.014 14.6 0.9 0.018 14.3 0.9 1.3 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family FeoB_associated PF12669.7 ORF56739 - 0.03 14.7 0.4 0.03 14.7 0.4 2.3 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein SecE PF00584.20 ORF56739 - 0.12 12.3 2.6 0.22 11.5 0.3 2.3 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex zf-LITAF-like PF10601.9 ORF56739 - 0.27 11.5 1.4 5 7.5 0.5 2.6 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain PgaD PF13994.6 ORF56739 - 0.68 10.0 7.0 0.17 11.9 2.8 2.0 1 1 1 2 2 2 0 PgaD-like protein EphA2_TM PF14575.6 ORF56739 - 1.2 10.0 2.8 0.78 10.7 0.3 2.0 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Baculo_E56 PF04639.12 ORF56739 - 5.2 6.2 6.1 1.3 8.2 2.5 1.7 2 0 0 2 2 2 0 Baculoviral E56 protein, specific to ODV envelope COX2_TM PF02790.15 ORF56739 - 6.7 6.9 10.1 0.3 11.3 2.1 2.4 1 1 1 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain Zip PF02535.22 ORF51777 - 6.2e-23 81.5 11.9 1.4e-16 60.7 0.8 2.6 1 1 1 2 2 2 2 ZIP Zinc transporter DUF4199 PF13858.6 ORF51777 - 0.01 16.2 1.3 0.02 15.3 1.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) PP2C PF00481.21 ORF50816 - 2.1e-25 89.9 0.0 2.6e-25 89.5 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF50816 - 1.1e-08 35.3 0.8 0.00066 19.6 0.3 2.5 2 1 1 3 3 3 2 Stage II sporulation protein E (SpoIIE) Pkinase PF00069.25 ORF49199 - 9.6e-43 146.4 0.0 1.1e-42 146.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49199 - 1.9e-24 86.4 0.0 2.5e-24 86.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF49199 - 0.002 18.1 0.0 0.0025 17.8 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF49199 - 0.018 14.4 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF49199 - 0.019 14.6 0.0 0.025 14.2 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Pox_ser-thr_kin PF05445.11 ORF49199 - 0.076 12.0 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase SH3_9 PF14604.6 ORF48829 - 8.6e-05 22.3 0.0 0.00016 21.5 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF48829 - 0.0066 16.0 0.0 0.01 15.4 0.0 1.3 1 0 0 1 1 1 1 SH3 domain Tom5 PF10642.9 ORF48829 - 0.15 12.1 1.7 0.52 10.4 1.4 2.0 2 0 0 2 2 2 0 Mitochondrial import receptor subunit or translocase Chloroa_b-bind PF00504.21 ORF48671 - 1e-39 136.7 0.8 6.1e-31 108.1 0.0 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein Thioredoxin PF00085.20 ORF47584 - 0.075 13.0 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF47584 - 0.12 12.4 0.0 0.21 11.6 0.0 1.5 1 1 0 1 1 1 0 Hydrogenase-1 expression protein HyaE ThiS-like PF14453.6 ORF47121 - 0.097 12.7 0.0 0.29 11.2 0.0 1.8 1 0 0 1 1 1 0 ThiS-like ubiquitin START PF01852.19 ORF44839 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF44839 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) PRANC PF09372.10 ORF44574 - 0.14 12.5 0.1 0.14 12.5 0.1 2.1 2 1 0 2 2 2 0 PRANC domain Adaptin_binding PF10199.9 ORF44574 - 0.2 12.3 1.5 0.34 11.5 1.5 1.3 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Glyco_hydro_47 PF01532.20 ORF44329 - 1.3e-37 129.8 0.0 1.7e-37 129.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 47 Helicase_C PF00271.31 ORF43083 - 9.4e-08 32.4 0.0 1.3e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PASTA PF03793.19 ORF43083 - 0.14 12.0 0.1 0.26 11.2 0.1 1.4 1 0 0 1 1 1 0 PASTA domain START PF01852.19 ORF42998 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF42998 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) MORN PF02493.20 ORF42662 - 2.7e-07 30.1 2.2 0.0098 15.7 0.1 3.2 3 0 0 3 3 3 2 MORN repeat CPSF_A PF03178.15 ORF42215 - 0.011 15.1 0.0 0.015 14.6 0.0 1.1 1 0 0 1 1 1 0 CPSF A subunit region 2OG-FeII_Oxy_2 PF13532.6 ORF40945 - 5.2e-19 69.2 0.0 6e-19 69.0 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily SGP PF17228.2 ORF38843 - 0.00047 20.9 12.7 0.00047 20.9 12.7 5.0 1 1 3 4 4 4 3 Sulphur globule protein REJ PF02010.15 ORF38738 - 6.4e-19 68.1 1.5 7.7e-19 67.8 1.5 1.0 1 0 0 1 1 1 1 REJ domain Peptidase_C1 PF00112.23 ORF38619 - 2e-36 126.2 2.7 2.3e-36 125.9 2.7 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF38619 - 0.00059 19.7 0.0 0.0031 17.4 0.0 2.1 2 1 0 2 2 2 1 Peptidase family C1 propeptide Peptidase_C2 PF00648.21 ORF38619 - 0.029 13.4 0.1 0.036 13.1 0.1 1.2 1 0 0 1 1 1 0 Calpain family cysteine protease Peptidase_C1_2 PF03051.15 ORF38619 - 0.11 11.3 0.1 1.1 8.0 0.1 2.0 1 1 1 2 2 2 0 Peptidase C1-like family Pkinase PF00069.25 ORF36983 - 3.2e-62 210.3 0.0 3.6e-62 210.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF36983 - 1.8e-27 96.2 0.0 2.2e-27 96.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF36983 - 0.0047 16.3 0.1 0.0066 15.8 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF36983 - 0.016 14.2 0.2 0.021 13.8 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF36983 - 0.017 14.5 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like YcxB PF14317.6 ORF36983 - 0.11 12.2 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 YcxB-like protein DUF3123 PF11321.8 ORF36181 - 0.2 12.3 7.2 1.6 9.5 0.6 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3123) TPR_9 PF13371.6 ORF34880 - 1.6e-05 24.9 0.1 3.2e-05 24.0 0.1 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF34880 - 7.8e-05 22.3 0.5 0.052 13.4 0.1 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF34880 - 0.00043 20.2 5.7 0.0024 17.8 0.3 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF34880 - 0.23 11.8 3.5 3 8.2 0.2 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat RIFIN PF02009.16 ORF34613 - 0.00071 19.6 0.9 0.0011 19.0 0.1 1.6 2 0 0 2 2 2 1 Rifin DUF4293 PF14126.6 ORF34613 - 0.007 16.6 7.4 0.018 15.3 7.4 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4293) Bac_export_2 PF01312.19 ORF34613 - 0.014 14.6 0.9 0.018 14.3 0.9 1.3 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family FeoB_associated PF12669.7 ORF34613 - 0.03 14.7 0.4 0.03 14.7 0.4 2.3 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein SecE PF00584.20 ORF34613 - 0.12 12.3 2.6 0.22 11.5 0.3 2.3 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex zf-LITAF-like PF10601.9 ORF34613 - 0.27 11.5 1.4 5 7.5 0.5 2.6 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain PgaD PF13994.6 ORF34613 - 0.68 10.0 7.0 0.17 11.9 2.8 2.0 1 1 1 2 2 2 0 PgaD-like protein EphA2_TM PF14575.6 ORF34613 - 1.2 10.0 2.8 0.78 10.7 0.3 2.0 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Baculo_E56 PF04639.12 ORF34613 - 5.2 6.2 6.1 1.3 8.2 2.5 1.7 2 0 0 2 2 2 0 Baculoviral E56 protein, specific to ODV envelope COX2_TM PF02790.15 ORF34613 - 6.7 6.9 10.1 0.3 11.3 2.1 2.4 1 1 1 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain Methyltr_RsmB-F PF01189.17 ORF32668 - 2e-25 89.7 0.0 2.5e-25 89.3 0.0 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_24 PF13578.6 ORF32668 - 5.6e-06 27.3 0.1 3.9e-05 24.6 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF31527 - 2.7e-11 43.5 0.0 3.8e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF31527 - 2.8e-11 43.5 0.0 3.8e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF31527 - 5.4e-11 43.0 0.0 8.3e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF31527 - 8.4e-11 42.4 0.0 1.3e-10 41.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF31527 - 4.9e-07 30.4 0.0 9.5e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF31527 - 0.00036 20.3 0.0 0.00052 19.8 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 ORF31527 - 0.0006 19.4 0.0 0.001 18.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 ORF31527 - 0.00061 19.2 0.0 0.0008 18.8 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TehB PF03848.14 ORF31527 - 0.00071 19.0 0.0 0.0012 18.3 0.0 1.5 1 1 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_32 PF13679.6 ORF31527 - 0.00081 19.4 0.0 0.0013 18.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 ORF31527 - 0.00087 18.8 0.0 0.0011 18.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MetW PF07021.12 ORF31527 - 0.0052 16.4 0.0 0.0071 16.0 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 ORF31527 - 0.024 14.6 0.0 0.05 13.5 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 ORF31527 - 0.04 13.2 0.0 0.051 12.8 0.0 1.4 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase START PF01852.19 ORF31165 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF31165 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) YwqJ-deaminase PF14431.6 ORF29575 - 0.0043 17.2 0.2 0.0083 16.3 0.2 1.6 1 1 0 1 1 1 1 YwqJ-like deaminase bZIP_2 PF07716.15 ORF29575 - 0.31 11.1 2.1 0.66 10.1 2.1 1.5 1 0 0 1 1 1 0 Basic region leucine zipper PQQ_3 PF13570.6 ORF28435 - 0.0027 18.1 0.1 18 6.0 0.0 3.7 3 1 0 3 3 3 2 PQQ-like domain ANAPC4_WD40 PF12894.7 ORF28435 - 0.13 12.5 0.0 0.6 10.4 0.0 2.0 1 1 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain START PF01852.19 ORF26453 - 2.6e-11 43.3 0.0 3.1e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 START domain CAP_assoc_N PF14504.6 ORF26453 - 0.029 14.1 0.4 0.054 13.2 0.4 1.5 1 0 0 1 1 1 0 CAP-associated N-terminal DUF2852 PF11014.8 ORF25979 - 0.086 13.0 3.8 0.054 13.6 2.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2852) LodA_N PF17990.1 ORF25979 - 0.94 9.4 4.3 2.9 7.7 4.2 1.8 1 1 0 1 1 1 0 L-Lysine epsilon oxidase N-terminal DUF4407 PF14362.6 ORF25979 - 3.9 6.7 11.5 5.3 6.3 11.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ArfGap PF01412.18 ORF25632 - 1.6e-31 108.8 0.0 2.1e-31 108.4 0.0 1.1 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf START PF01852.19 ORF24483 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF24483 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) START PF01852.19 ORF22523 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF22523 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) DUF3431 PF11913.8 ORF21032 - 1.3e-16 61.1 0.1 3.1e-11 43.5 0.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF3431) Prolamin_like PF05617.11 ORF21032 - 0.057 13.6 0.1 0.16 12.2 0.0 1.7 2 0 0 2 2 2 0 Prolamin-like 2-oxoacid_dh PF00198.23 ORF17262 - 2.9e-65 220.0 0.0 3.2e-65 219.8 0.0 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks84.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks84.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks84.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks84.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LRR19-TM PF15176.6 ORF14945 - 0.39 10.8 0.0 0.39 10.8 0.0 2.5 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain Peptidase_C1 PF00112.23 ORF13699 - 2e-37 129.4 2.7 2.4e-37 129.1 2.7 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF13699 - 0.00059 19.7 0.0 0.0031 17.4 0.0 2.1 2 1 0 2 2 2 1 Peptidase family C1 propeptide Peptidase_C2 PF00648.21 ORF13699 - 0.027 13.5 0.1 0.034 13.2 0.1 1.2 1 0 0 1 1 1 0 Calpain family cysteine protease Peptidase_C1_2 PF03051.15 ORF13699 - 0.11 11.3 0.1 1.1 8.0 0.1 2.0 1 1 1 2 2 2 0 Peptidase C1-like family Chloroa_b-bind PF00504.21 ORF1282 - 1e-39 136.7 0.8 6.1e-31 108.1 0.0 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein AhpC-TSA PF00578.21 ORF11938 - 3.1e-36 124.0 0.0 5.3e-36 123.3 0.0 1.4 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF11938 - 6.4e-16 58.4 0.0 9.7e-16 57.8 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF11938 - 7.4e-11 41.7 0.2 1.4e-10 40.8 0.2 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin START PF01852.19 ORF11234 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF11234 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) Pkinase PF00069.25 ORF111089 - 3.2e-62 210.3 0.0 3.6e-62 210.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF111089 - 1.8e-27 96.2 0.0 2.2e-27 96.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF111089 - 0.0047 16.3 0.1 0.0066 15.8 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF111089 - 0.016 14.2 0.2 0.021 13.8 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF111089 - 0.017 14.5 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like YcxB PF14317.6 ORF111089 - 0.11 12.2 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 YcxB-like protein RNA_pol_Rpc4 PF05132.14 ORF109264 - 2.2e-21 76.8 0.7 2e-18 67.3 0.0 2.6 2 1 1 3 3 3 2 RNA polymerase III RPC4 START PF01852.19 ORF104533 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF104533 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) Asp PF00026.23 ORF104304 - 1.4e-15 57.5 0.2 1.7e-15 57.2 0.2 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF104304 - 0.0019 18.0 0.0 0.0038 17.0 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal LSM PF01423.22 ORF104189 - 3.7e-16 58.6 0.0 5.2e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 LSM domain AhpC-TSA PF00578.21 ORF103409 - 3.1e-36 124.0 0.0 5.3e-36 123.3 0.0 1.4 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF103409 - 6.4e-16 58.4 0.0 9.7e-16 57.8 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF103409 - 7.4e-11 41.7 0.2 1.4e-10 40.8 0.2 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Lipase_3 PF01764.25 ORF102656 - 1.5e-27 96.2 0.0 2.1e-27 95.7 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Peptidase_S9 PF00326.21 ORF102656 - 0.00035 20.1 0.0 0.00049 19.6 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family PGAP1 PF07819.13 ORF102656 - 0.0039 17.0 0.0 0.0053 16.5 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Hydrolase_4 PF12146.8 ORF102656 - 0.021 14.1 0.0 0.033 13.5 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF676 PF05057.14 ORF102656 - 0.11 12.0 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 Putative serine esterase (DUF676) PKI PF02827.16 ORF102656 - 0.13 12.4 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 cAMP-dependent protein kinase inhibitor Hormone_4 PF00220.17 NODE_32619_length_667_cov_62.949367_g25910_i0forward_frame_1 - 0.08 12.9 0.7 0.36 10.9 0.7 2.1 1 0 0 1 1 1 0 Neurohypophysial hormones, N-terminal Domain C2 PF00168.30 NODE_32616_length_667_cov_93.637658_g25907_i0reverse_frame_1 - 3.5e-10 40.1 0.0 7.4e-10 39.0 0.0 1.6 1 0 0 1 1 1 1 C2 domain Cadherin_tail PF15974.5 NODE_32616_length_667_cov_93.637658_g25907_i0reverse_frame_1 - 0.49 10.7 7.5 0.53 10.6 5.0 2.0 2 0 0 2 2 2 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region DUF2917 PF11142.8 NODE_32598_length_667_cov_275.311709_g25889_i0forward_frame_1 - 0.092 12.2 0.1 0.16 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2917) 5_nucleotid_C PF02872.18 NODE_32587_length_667_cov_1184.409810_g7502_i1reverse_frame_1 - 7.2e-15 55.5 0.0 9.9e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain CDC45 PF02724.14 NODE_32587_length_667_cov_1184.409810_g7502_i1reverse_frame_1 - 0.077 11.3 0.0 0.097 11.0 0.0 1.0 1 0 0 1 1 1 0 CDC45-like protein IL1_propep PF02394.16 NODE_32528_length_669_cov_3.727129_g25832_i0reverse_frame_1 - 0.028 15.4 0.4 0.061 14.3 0.4 1.5 1 0 0 1 1 1 0 Interleukin-1 propeptide PACT_coil_coil PF10495.9 NODE_32528_length_669_cov_3.727129_g25832_i0reverse_frame_1 - 0.13 12.9 0.5 0.53 10.9 0.5 2.0 1 1 0 1 1 1 0 Pericentrin-AKAP-450 domain of centrosomal targeting protein FPP PF05911.11 NODE_32528_length_669_cov_3.727129_g25832_i0reverse_frame_1 - 0.18 10.0 4.2 0.2 9.8 4.2 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil ATP11 PF06644.11 NODE_32501_length_669_cov_320.761830_g25810_i0forward_frame_1 - 5.3e-19 69.1 0.0 7.6e-19 68.6 0.0 1.2 1 0 0 1 1 1 1 ATP11 protein SHIPPO-rpt PF07004.12 NODE_32477_length_670_cov_2.448819_g25791_i0reverse_frame_2 - 0.00011 22.9 18.4 0.93 10.5 0.0 4.6 3 1 0 3 3 3 3 Sperm-tail PG-rich repeat Sel1 PF08238.12 NODE_32476_length_670_cov_2.554331_g25790_i0reverse_frame_2 - 6.6e-18 64.8 6.2 3.1e-08 34.0 0.1 3.5 3 0 0 3 3 3 3 Sel1 repeat ZFYVE21_C PF16696.5 NODE_32474_length_670_cov_3.114961_g25788_i0reverse_frame_3 - 0.0037 17.1 0.3 0.0052 16.7 0.3 1.3 1 0 0 1 1 1 1 Zinc finger FYVE domain-containing protein 21 C-terminus DUF4830 PF16112.5 NODE_32474_length_670_cov_3.114961_g25788_i0forward_frame_3 - 0.018 15.5 0.0 0.042 14.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Aldolase_II PF00596.21 NODE_32455_length_670_cov_236.637795_g25769_i0reverse_frame_2 - 1.4e-07 31.6 0.0 2.7e-06 27.5 0.0 2.0 1 1 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain DUF4357 PF14267.6 NODE_32455_length_670_cov_236.637795_g25769_i0forward_frame_2 - 4 7.5 5.6 23 5.0 0.3 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4357) COX8 PF02285.15 NODE_32443_length_670_cov_710.121260_g25758_i0forward_frame_3 - 1.4 8.8 35.8 6.4 6.7 0.5 8.4 5 2 2 7 7 7 0 Cytochrome oxidase c subunit VIII NTP_transferase PF00483.23 NODE_32437_length_671_cov_2.529874_g25754_i0reverse_frame_2 - 7.1e-15 55.3 0.0 9.3e-15 54.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 NODE_32437_length_671_cov_2.529874_g25754_i0reverse_frame_2 - 1.4e-07 32.1 0.0 2.2e-07 31.3 0.0 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 NODE_32437_length_671_cov_2.529874_g25754_i0reverse_frame_2 - 0.0025 17.6 0.0 0.0052 16.5 0.0 1.5 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 NODE_32437_length_671_cov_2.529874_g25754_i0reverse_frame_2 - 0.02 14.8 0.1 0.029 14.3 0.1 1.2 1 0 0 1 1 1 0 Cytidylyltransferase zinc_ribbon_16 PF17034.5 NODE_32437_length_671_cov_2.529874_g25754_i0forward_frame_3 - 0.035 14.3 0.3 0.05 13.8 0.3 1.3 1 0 0 1 1 1 0 Zinc-ribbon like family HPS6 PF15702.5 NODE_32436_length_671_cov_2.751572_g25753_i0reverse_frame_3 - 0.12 10.3 0.0 0.15 10.0 0.0 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein MORN PF02493.20 NODE_32429_length_671_cov_66.331761_g25747_i0forward_frame_3 - 0.037 13.9 9.6 1 9.4 0.7 3.5 4 0 0 4 4 4 0 MORN repeat DUF3657 PF12394.8 NODE_32426_length_671_cov_76.682390_g25744_i0reverse_frame_3 - 0.087 13.4 0.2 0.25 11.9 0.2 1.8 1 0 0 1 1 1 0 Protein FAM135 C_LFY_FLO PF17538.2 NODE_32356_length_672_cov_6780.420722_g25684_i0forward_frame_2 - 0.0018 17.8 0.2 0.0029 17.1 0.2 1.2 1 0 0 1 1 1 1 DNA Binding Domain (C-terminal) Leafy/Floricaula O-antigen_lig PF13425.6 ORF98746 - 1 8.1 6.1 1.4 7.6 6.1 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein UL45 PF05473.12 ORF97391 - 0.22 11.2 0.0 0.32 10.6 0.0 1.2 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like DnaJ PF00226.31 ORF96148 - 4e-16 58.9 0.7 4e-16 58.9 0.7 1.8 2 0 0 2 2 2 1 DnaJ domain RPT PF13446.6 ORF96148 - 0.0029 17.5 0.1 0.0065 16.4 0.1 1.6 1 0 0 1 1 1 1 A repeated domain in UCH-protein LMBR1 PF04791.16 ORF96148 - 2.1 7.1 2.8 2.6 6.9 2.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Atrophin-1 PF03154.15 ORF96148 - 2.7 6.2 8.7 3.5 5.8 8.7 1.1 1 0 0 1 1 1 0 Atrophin-1 family MORN PF02493.20 ORF94771 - 2.6e-08 33.3 28.1 0.00019 21.1 1.0 5.5 5 0 0 5 5 5 4 MORN repeat Ribosomal_L16 PF00252.18 ORF94616 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Homeodomain PF00046.29 ORF94597 - 0.0027 17.5 2.5 0.0027 17.5 2.5 2.1 2 0 0 2 2 2 1 Homeodomain Peptidase_C1 PF00112.23 ORF94592 - 1.4e-14 54.8 0.2 2e-14 54.2 0.2 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Sortilin_C PF15901.5 ORF94592 - 8.6e-05 22.9 0.4 0.00012 22.5 0.4 1.2 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal Crystall_2 PF09076.10 ORF94592 - 0.097 12.6 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Beta/Gamma crystallin DUF4538 PF15061.6 ORF94592 - 0.33 10.7 1.5 0.55 10.0 1.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) Ribosomal_L16 PF00252.18 ORF93729 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e EF-hand_6 PF13405.6 ORF90143 - 1.4e-06 27.8 1.9 4.3e-05 23.1 0.4 3.0 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF90143 - 2e-06 26.9 1.8 3.7e-06 26.1 0.5 2.1 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF90143 - 0.00026 21.4 1.7 0.00079 19.8 1.7 1.8 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF90143 - 0.0038 17.0 1.4 0.019 14.8 0.4 2.4 2 1 1 3 3 3 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF90143 - 0.03 13.8 0.3 0.068 12.7 0.3 1.5 1 0 0 1 1 1 0 EF hand CCD48 PF15799.5 ORF90143 - 0.15 10.3 0.0 0.2 9.9 0.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 Homeodomain PF00046.29 ORF8847 - 0.0027 17.5 2.5 0.0027 17.5 2.5 2.1 2 0 0 2 2 2 1 Homeodomain Pkinase PF00069.25 ORF8814 - 1e-43 149.6 0.0 1.2e-43 149.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF8814 - 1.2e-24 87.0 0.0 1.6e-24 86.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF8814 - 0.002 18.1 0.0 0.0025 17.8 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF8814 - 0.018 14.4 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF8814 - 0.018 14.6 0.0 0.025 14.2 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Pox_ser-thr_kin PF05445.11 ORF8814 - 0.075 12.0 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Macro PF01661.21 ORF86349 - 2.9e-10 40.2 0.0 6.5e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Macro domain C2 PF00168.30 ORF85524 - 4.5e-23 81.5 0.0 8.7e-23 80.6 0.0 1.5 1 0 0 1 1 1 1 C2 domain Ribosomal_L16 PF00252.18 ORF85107 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e UBA_4 PF14555.6 ORF82282 - 1.2e-06 28.2 0.2 2.1e-06 27.4 0.2 1.4 1 0 0 1 1 1 1 UBA-like domain TRAM_LAG1_CLN8 PF03798.16 ORF81609 - 2.1e-21 76.6 24.6 2.3e-21 76.4 24.6 1.0 1 0 0 1 1 1 1 TLC domain Fer4_11 PF13247.6 ORF76556 - 6.1e-24 84.0 10.7 6.1e-24 84.0 10.7 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF76556 - 7.2e-16 58.5 25.3 3.5e-08 33.9 8.0 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 ORF76556 - 4.2e-13 48.5 40.5 5e-06 26.1 3.2 5.4 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_9 PF13187.6 ORF76556 - 5.1e-13 49.0 23.9 2e-06 27.9 6.6 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF76556 - 7e-13 48.0 38.1 0.00027 20.9 4.6 4.7 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_10 PF13237.6 ORF76556 - 1.2e-10 41.4 30.6 8.9e-06 25.7 10.3 3.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF76556 - 6.3e-09 36.2 41.4 0.012 16.5 2.2 4.2 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_2 PF12797.7 ORF76556 - 9.7e-09 34.8 33.7 0.00068 19.6 3.1 4.5 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.6 ORF76556 - 4.1e-07 30.8 23.7 0.24 12.3 0.1 4.3 3 1 1 4 4 4 4 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 ORF76556 - 4.2e-05 23.7 37.5 0.014 15.8 3.2 4.7 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 ORF76556 - 0.00057 20.0 30.4 0.046 13.9 11.7 3.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF76556 - 0.0026 18.3 26.2 2 9.0 9.4 4.4 1 1 2 3 3 3 1 4Fe-4S dicluster domain TAT_signal PF10518.9 ORF76556 - 0.0036 17.1 1.4 0.0067 16.2 1.4 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Fer4_13 PF13370.6 ORF76556 - 0.029 14.9 22.0 0.043 14.3 0.3 4.2 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 ORF76556 - 0.052 14.0 30.6 0.11 13.0 10.3 3.7 2 2 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 ORF76556 - 0.12 12.6 26.8 0.39 10.9 2.2 3.7 1 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 ORF76556 - 0.29 11.9 24.4 2.6 8.8 8.0 4.1 3 1 1 4 4 4 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 ORF76556 - 6.4 7.7 22.4 0.67 10.8 0.7 3.7 3 1 1 4 4 4 0 4Fe-4S dicluster domain Ribonuc_red_sm PF00268.21 ORF76097 - 6.9e-73 245.5 0.4 8.6e-73 245.2 0.4 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Peptidase_C1 PF00112.23 ORF75936 - 1.4e-14 54.8 0.2 2e-14 54.2 0.2 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Sortilin_C PF15901.5 ORF75936 - 8.6e-05 22.9 0.4 0.00012 22.5 0.4 1.2 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal Crystall_2 PF09076.10 ORF75936 - 0.097 12.6 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Beta/Gamma crystallin DUF4538 PF15061.6 ORF75936 - 0.33 10.7 1.5 0.55 10.0 1.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) FUSC PF04632.12 ORF71772 - 2.4e-35 122.3 5.0 2.9e-35 122.0 5.0 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family GST_N PF02798.20 ORF70325 - 1.1e-12 48.1 0.0 1.8e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF70325 - 1.2e-12 48.1 0.0 2.1e-12 47.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF70325 - 1e-07 32.0 0.1 1.9e-07 31.2 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF70325 - 1.1e-06 28.8 0.1 2e-06 27.9 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF70325 - 4.5e-06 26.9 0.0 8e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF70325 - 0.00042 20.3 0.0 0.0014 18.6 0.0 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain CS PF04969.16 ORF68789 - 8.1e-12 46.0 0.2 1.7e-11 45.0 0.1 1.5 2 0 0 2 2 2 1 CS domain ApoO PF09769.9 ORF68789 - 0.017 15.1 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Apolipoprotein O FbpA PF05833.11 ORF68109 - 1.4e-24 86.7 1.8 1.4e-24 86.7 1.8 1.4 1 1 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) Phi-29_GP16_7 PF06720.11 ORF67952 - 0.13 12.1 0.7 5.9 6.7 0.1 2.3 2 0 0 2 2 2 0 Bacteriophage phi-29 early protein GP16.7 MORN PF02493.20 ORF67952 - 0.17 11.9 7.5 2 8.4 0.1 3.0 3 0 0 3 3 3 0 MORN repeat Fer4_14 PF13394.6 ORF66862 - 6.6e-14 52.1 0.1 1.2e-13 51.2 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 ORF66862 - 1.7e-08 35.1 0.1 3.4e-08 34.1 0.2 1.6 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 ORF66862 - 6.2e-07 29.8 0.1 8.9e-07 29.3 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain PARP PF00644.20 ORF66771 - 7.9e-20 71.3 1.3 2.7e-17 63.0 1.3 2.6 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Abhydrolase_2 PF02230.16 ORF63349 - 1.5e-29 103.3 0.0 2e-29 103.0 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 ORF63349 - 0.00031 20.1 0.6 0.41 9.9 0.0 2.5 2 1 1 3 3 3 2 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 ORF63349 - 0.00077 19.4 0.4 0.085 12.7 0.2 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold Esterase PF00756.20 ORF63349 - 0.0015 18.2 0.0 0.0016 18.2 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF63349 - 0.0045 16.5 0.6 0.17 11.4 0.0 2.2 2 0 0 2 2 2 1 Prolyl oligopeptidase family DLH PF01738.18 ORF63349 - 0.0075 15.8 0.0 0.011 15.3 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family FSH1 PF03959.13 ORF63349 - 0.014 15.0 0.0 0.025 14.3 0.0 1.5 1 1 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_1 PF00561.20 ORF63349 - 0.034 13.8 0.1 0.092 12.4 0.0 1.7 2 1 0 2 2 2 0 alpha/beta hydrolase fold NST1 PF13945.6 ORF62147 - 0.12 12.5 0.7 0.19 11.8 0.6 1.4 1 1 0 1 1 1 0 Salt tolerance down-regulator Ion_trans PF00520.31 ORF59469 - 5e-05 22.7 6.9 7.7e-05 22.0 6.9 1.2 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF59469 - 0.24 10.0 4.6 0.32 9.6 4.6 1.1 1 0 0 1 1 1 0 Polycystin cation channel Ribosomal_L16 PF00252.18 ORF59439 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e FdhD-NarQ PF02634.15 ORF58883 - 6.2e-66 222.5 0.0 7e-66 222.3 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family Macro PF01661.21 ORF57257 - 2.9e-10 40.2 0.0 6.5e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Macro domain CobW_C PF07683.14 ORF56619 - 3.2e-23 81.5 0.0 6.1e-23 80.6 0.0 1.5 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain Ribosomal_L16 PF00252.18 ORF55441 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e OTU PF02338.19 ORF5482 - 3.6e-11 43.7 0.1 8.4e-11 42.5 0.0 1.6 1 1 1 2 2 2 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF5482 - 0.025 14.0 0.4 0.062 12.7 0.1 1.7 1 1 1 2 2 2 0 Peptidase C65 Otubain Pex24p PF06398.11 ORF51389 - 0.13 11.2 2.4 0.21 10.5 2.4 1.3 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin TRAM1 PF08390.11 ORF51389 - 2.1 8.1 5.0 0.93 9.2 0.9 2.3 2 0 0 2 2 2 0 TRAM1-like protein zinc_ribbon_4 PF13717.6 ORF50387 - 0.06 13.3 0.1 0.06 13.3 0.1 2.3 3 0 0 3 3 3 0 zinc-ribbon domain BLYB PF05289.11 ORF49666 - 0.011 16.0 1.1 0.032 14.5 0.4 2.1 2 0 0 2 2 2 0 Borrelia hemolysin accessory protein NUC153 PF08159.12 ORF49666 - 0.2 11.5 2.4 1.6 8.6 0.1 2.9 3 0 0 3 3 3 0 NUC153 domain UQ_con PF00179.26 ORF48799 - 2.3e-15 56.5 0.1 3.9e-15 55.7 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF2754 PF10953.8 ORF48799 - 0.0012 19.0 0.2 0.23 11.7 0.0 2.6 3 0 0 3 3 3 2 Protein of unknown function (DUF2754) RWD PF05773.22 ORF48799 - 0.038 14.3 0.1 0.071 13.4 0.1 1.6 1 0 0 1 1 1 0 RWD domain Ion_trans PF00520.31 ORF48784 - 0.0035 16.6 0.2 0.0051 16.1 0.2 1.2 1 0 0 1 1 1 1 Ion transport protein Glyco_hydro_cc PF11790.8 ORF48328 - 1.5e-52 178.5 0.1 1.7e-52 178.4 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase catalytic core Pkinase PF00069.25 ORF46374 - 1.9e-35 122.5 0.0 2.1e-35 122.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46374 - 7e-35 120.6 0.0 7.6e-35 120.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF46374 - 0.0012 18.3 0.0 0.0018 17.7 0.0 1.3 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF46374 - 0.002 18.1 0.0 0.0031 17.5 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF46374 - 0.003 16.4 0.0 0.0042 15.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF46374 - 0.0088 15.4 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EcKinase PF02958.20 ORF46374 - 0.022 14.1 0.0 0.031 13.6 0.0 1.2 1 0 0 1 1 1 0 Ecdysteroid kinase RIO1 PF01163.22 ORF46374 - 0.17 11.4 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Lig_chan PF00060.26 ORF43948 - 0.076 12.9 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Ligand-gated ion channel FdhD-NarQ PF02634.15 ORF439 - 6.2e-66 222.5 0.0 7e-66 222.3 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family Flavodoxin_1 PF00258.25 ORF43127 - 1e-23 84.1 1.3 1.4e-23 83.7 1.3 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 ORF43127 - 0.00027 20.7 0.0 0.00047 19.9 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.7 ORF43127 - 0.0017 18.6 0.0 0.0026 18.0 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain AhpC-TSA PF00578.21 ORF43127 - 0.0047 16.8 0.0 0.012 15.5 0.0 1.6 2 0 0 2 2 2 1 AhpC/TSA family Flavodoxin_NdrI PF07972.11 ORF43127 - 0.024 14.8 0.0 0.036 14.3 0.0 1.2 1 0 0 1 1 1 0 NrdI Flavodoxin like Spherulin4 PF12138.8 ORF43127 - 0.1 12.2 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Spherulation-specific family 4 FMN_red PF03358.15 ORF43127 - 0.15 11.8 0.1 11 5.7 0.0 3.1 1 1 2 3 3 3 0 NADPH-dependent FMN reductase Coprogen_oxidas PF01218.18 ORF43077 - 1.1e-77 260.7 0.1 1.3e-77 260.5 0.1 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase SBP_bac_8 PF13416.6 ORF4144 - 9.2e-18 65.0 2.7 1.3e-17 64.5 2.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 ORF4144 - 9.8e-18 65.2 5.2 1.4e-17 64.6 5.2 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Response_reg PF00072.24 ORF41248 - 1.6e-25 89.4 0.1 2.6e-25 88.7 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 ORF41248 - 8.3e-20 70.7 0.1 1.8e-19 69.6 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal HD PF01966.22 ORF41073 - 4.3e-11 43.1 0.0 7.8e-11 42.3 0.0 1.5 1 0 0 1 1 1 1 HD domain DnaJ PF00226.31 ORF40325 - 4e-16 58.9 0.7 4e-16 58.9 0.7 1.8 2 0 0 2 2 2 1 DnaJ domain RPT PF13446.6 ORF40325 - 0.0029 17.5 0.1 0.0065 16.4 0.1 1.6 1 0 0 1 1 1 1 A repeated domain in UCH-protein LMBR1 PF04791.16 ORF40325 - 2.1 7.1 2.8 2.6 6.9 2.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Atrophin-1 PF03154.15 ORF40325 - 2.7 6.2 8.7 3.5 5.8 8.7 1.1 1 0 0 1 1 1 0 Atrophin-1 family GST_C_3 PF14497.6 ORF39989 - 8.8e-14 51.5 0.0 1.4e-13 50.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF39989 - 2e-09 37.6 0.0 3.2e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF39989 - 1.8e-06 28.1 0.0 2.9e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF39989 - 7.2e-05 22.5 0.0 0.00015 21.5 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF39989 - 0.0019 18.6 0.0 0.004 17.5 0.0 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF39989 - 0.0083 16.1 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Ank_4 PF13637.6 ORF36086 - 1.3e-29 102.2 7.7 2.6e-08 34.3 0.4 4.7 3 2 3 6 6 6 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF36086 - 6.9e-22 77.8 0.3 2.5e-11 44.0 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF36086 - 2.4e-19 67.4 0.1 0.022 15.3 0.0 6.1 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF36086 - 6.3e-13 48.7 3.0 1.2e-05 25.5 0.3 4.8 2 1 4 6 6 6 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF36086 - 8.5e-13 48.1 8.9 0.017 15.6 0.4 6.1 6 0 0 6 6 6 4 Ankyrin repeat SlyX PF04102.12 ORF35628 - 0.082 13.5 0.3 0.33 11.6 0.0 2.0 2 0 0 2 2 2 0 SlyX Coat_F PF07875.12 ORF35628 - 0.098 12.9 0.3 0.25 11.6 0.3 1.6 1 0 0 1 1 1 0 Coat F domain T7SS_ESX_EspC PF10824.8 ORF35628 - 0.2 12.2 3.9 0.1 13.1 1.0 2.0 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm WXG100 PF06013.12 ORF35628 - 4.6 7.5 10.6 0.9 9.8 4.0 2.6 2 1 1 3 3 3 0 Proteins of 100 residues with WXG adh_short PF00106.25 ORF353 - 1.8e-43 148.3 3.6 2.3e-43 148.0 3.6 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF353 - 5.8e-36 124.2 0.4 6.8e-36 124.0 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF353 - 1e-06 28.8 4.2 7.7e-06 25.9 4.2 2.1 1 1 0 1 1 1 1 KR domain 3Beta_HSD PF01073.19 ORF353 - 8.7e-06 24.9 2.3 1.2e-05 24.4 2.3 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF353 - 0.0017 17.9 0.9 0.0029 17.1 0.6 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF353 - 0.014 14.8 0.4 0.023 14.1 0.4 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Tex_YqgF PF16921.5 ORF353 - 0.025 15.1 0.9 0.039 14.4 0.9 1.2 1 0 0 1 1 1 0 Tex protein YqgF-like domain Sacchrp_dh_NADP PF03435.18 ORF353 - 0.08 13.2 0.9 0.14 12.4 0.6 1.6 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain MukF_C PF17193.4 ORF353 - 0.14 12.3 1.3 2.6 8.2 0.3 2.1 1 1 1 2 2 2 0 MukF C-terminal domain Flavodoxin_1 PF00258.25 ORF34701 - 1e-23 84.1 1.3 1.4e-23 83.7 1.3 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 ORF34701 - 0.00027 20.7 0.0 0.00047 19.9 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.7 ORF34701 - 0.0017 18.6 0.0 0.0026 18.0 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain AhpC-TSA PF00578.21 ORF34701 - 0.0047 16.8 0.0 0.012 15.5 0.0 1.6 2 0 0 2 2 2 1 AhpC/TSA family Flavodoxin_NdrI PF07972.11 ORF34701 - 0.024 14.8 0.0 0.036 14.3 0.0 1.2 1 0 0 1 1 1 0 NrdI Flavodoxin like Spherulin4 PF12138.8 ORF34701 - 0.1 12.2 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Spherulation-specific family 4 FMN_red PF03358.15 ORF34701 - 0.15 11.8 0.1 11 5.7 0.0 3.1 1 1 2 3 3 3 0 NADPH-dependent FMN reductase Endonuclease_5 PF04493.14 ORF34276 - 1.9e-73 246.3 0.0 2.2e-73 246.1 0.0 1.0 1 0 0 1 1 1 1 Endonuclease V UvrC_HhH_N PF08459.11 ORF34276 - 0.025 14.5 0.0 0.065 13.1 0.0 1.6 1 1 0 1 1 1 0 UvrC Helix-hairpin-helix N-terminal DUF1580 PF07618.11 ORF34276 - 0.1 12.3 0.1 0.22 11.2 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1580) Thioredoxin_4 PF13462.6 ORF33179 - 6.1e-10 39.5 0.0 8.8e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF33179 - 0.00016 21.5 0.1 0.6 9.9 0.0 2.1 2 0 0 2 2 2 2 DSBA-like thioredoxin domain DUF3563 PF12086.8 ORF33179 - 0.1 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3563) Ribosomal_L16 PF00252.18 ORF32241 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e SBP_bac_8 PF13416.6 ORF30964 - 9.2e-18 65.0 2.7 1.3e-17 64.5 2.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 ORF30964 - 9.8e-18 65.2 5.2 1.4e-17 64.6 5.2 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Phi-29_GP16_7 PF06720.11 ORF30513 - 0.13 12.1 0.7 5.9 6.7 0.1 2.3 2 0 0 2 2 2 0 Bacteriophage phi-29 early protein GP16.7 MORN PF02493.20 ORF30513 - 0.17 11.9 7.5 2 8.4 0.1 3.0 3 0 0 3 3 3 0 MORN repeat Ribosomal_L16 PF00252.18 ORF30265 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e CBP_BcsQ PF06564.12 ORF28546 - 1.3e-92 309.5 3.9 1.5e-92 309.3 3.9 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ GST_C_3 PF14497.6 ORF28475 - 8.8e-14 51.5 0.0 1.4e-13 50.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF28475 - 2e-09 37.6 0.0 3.2e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF28475 - 1.8e-06 28.1 0.0 2.9e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF28475 - 7.2e-05 22.5 0.0 0.00015 21.5 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF28475 - 0.0018 18.7 0.0 0.004 17.5 0.0 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF28475 - 0.0084 16.1 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GTP_cyclohydro2 PF00925.20 ORF27857 - 6.7e-37 126.6 0.0 8.8e-37 126.2 0.0 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase II tRNA_bind_3 PF17176.4 ORF27857 - 0.099 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 tRNA-binding domain Flavodoxin_1 PF00258.25 ORF27319 - 1.4e-23 83.7 1.3 2.2e-23 83.0 1.3 1.3 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 ORF27319 - 0.00019 21.2 0.0 0.00035 20.3 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.7 ORF27319 - 0.0013 19.0 0.0 0.0023 18.2 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin domain AhpC-TSA PF00578.21 ORF27319 - 0.0027 17.6 0.0 0.0053 16.7 0.0 1.5 1 0 0 1 1 1 1 AhpC/TSA family Flavodoxin_NdrI PF07972.11 ORF27319 - 0.058 13.6 0.0 0.091 12.9 0.0 1.3 1 0 0 1 1 1 0 NrdI Flavodoxin like FMN_red PF03358.15 ORF27319 - 0.14 11.9 0.1 8.8 6.1 0.0 3.1 1 1 2 3 3 3 0 NADPH-dependent FMN reductase TrbC PF04956.13 ORF27319 - 0.18 12.0 0.4 0.36 11.1 0.4 1.5 1 0 0 1 1 1 0 TrbC/VIRB2 family Ribosomal_L16 PF00252.18 ORF27228 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Methyltransf_3 PF01596.17 ORF26823 - 1.6e-59 200.7 0.5 1.9e-59 200.4 0.5 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF26823 - 2.2e-10 41.5 0.0 3.1e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF26823 - 0.005 16.6 0.0 0.0083 15.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF26823 - 0.022 14.5 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) zf-Tim10_DDP PF02953.15 ORF24697 - 0.11 12.2 0.4 0.4 10.4 0.0 2.1 2 0 0 2 2 2 0 Tim10/DDP family zinc finger APC_r PF05923.12 ORF24697 - 5.4 6.9 5.7 9.3 6.1 5.7 1.4 1 0 0 1 1 1 0 APC repeat Porphobil_deam PF01379.20 ORF23775 - 8.4e-36 123.4 0.0 1.1e-35 123.0 0.0 1.2 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 ORF23775 - 1.3e-17 64.0 0.1 2.3e-17 63.1 0.1 1.5 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain Pex24p PF06398.11 ORF22970 - 0.13 11.2 2.4 0.21 10.5 2.4 1.3 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin TRAM1 PF08390.11 ORF22970 - 2.1 8.1 5.0 0.93 9.2 0.9 2.3 2 0 0 2 2 2 0 TRAM1-like protein Rieske PF00355.26 ORF22569 - 1.6e-12 47.2 0.0 3.3e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF22569 - 1.8e-07 31.0 0.0 4.7e-07 29.7 0.0 1.7 2 0 0 2 2 2 1 Rieske-like [2Fe-2S] domain zf-A20 PF01754.16 ORF22569 - 0.18 11.8 0.1 0.3 11.1 0.1 1.3 1 0 0 1 1 1 0 A20-like zinc finger Ribosomal_L16 PF00252.18 ORF2162 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Ribonuc_red_sm PF00268.21 ORF19246 - 6.9e-73 245.5 0.4 8.6e-73 245.2 0.4 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain GST_C_3 PF14497.6 ORF18459 - 8.8e-14 51.5 0.0 1.4e-13 50.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF18459 - 2e-09 37.6 0.0 3.2e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF18459 - 1.8e-06 28.1 0.0 2.9e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF18459 - 7.2e-05 22.5 0.0 0.00015 21.5 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF18459 - 0.0019 18.6 0.0 0.004 17.5 0.0 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF18459 - 0.0083 16.1 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Bap31_Bap29_C PF18035.1 ORF16649 - 0.27 11.3 3.8 0.72 9.9 3.8 1.8 1 1 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain ATP11 PF06644.11 ORF16649 - 8.4 6.1 13.4 31 4.2 9.1 2.0 1 1 1 2 2 2 0 ATP11 protein CDK2AP PF09806.9 ORF16415 - 0.084 12.9 9.5 0.12 12.5 9.5 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein DUF3292 PF11696.8 ORF16415 - 0.52 8.6 4.3 0.68 8.2 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) TFIIA PF03153.13 ORF16415 - 0.59 10.1 5.8 0.66 9.9 5.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Tic110 PF16940.5 ORF16415 - 1.6 7.1 8.5 1.9 6.9 8.5 1.3 1 0 0 1 1 1 0 Chloroplast envelope transporter SpoVS PF04232.12 ORF15066 - 1.7e-05 24.5 1.6 0.0094 15.7 0.2 2.2 2 0 0 2 2 2 2 Stage V sporulation protein S (SpoVS) Ribosomal_L16 PF00252.18 ORF15027 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Rho_Binding PF08912.11 ORF12727 - 0.3 11.9 6.1 5 8.0 0.0 3.3 2 1 2 4 4 4 0 Rho Binding Pkinase PF00069.25 ORF111135 - 3.1e-44 151.3 0.0 3.6e-44 151.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF111135 - 4.6e-25 88.4 0.0 5.9e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF111135 - 0.0019 18.2 0.0 0.0023 17.9 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF111135 - 0.018 14.4 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF111135 - 0.018 14.6 0.0 0.025 14.2 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Pox_ser-thr_kin PF05445.11 ORF111135 - 0.075 12.0 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Syndecan PF01034.20 ORF110875 - 3.1e-06 27.0 0.1 5.7e-06 26.1 0.1 1.4 1 0 0 1 1 1 1 Syndecan domain Glycophorin_A PF01102.18 ORF110875 - 6.8e-05 23.1 0.1 0.00011 22.4 0.1 1.4 1 0 0 1 1 1 1 Glycophorin A DUF4690 PF15756.5 ORF110875 - 0.00011 22.7 0.4 0.00024 21.6 0.4 1.5 1 0 0 1 1 1 1 Small Novel Rich in Cartilage TMEM154 PF15102.6 ORF110875 - 0.00079 19.4 0.1 0.0013 18.7 0.1 1.3 1 0 0 1 1 1 1 TMEM154 protein family Podoplanin PF05808.11 ORF110875 - 0.0015 18.6 0.2 0.0021 18.2 0.2 1.3 1 0 0 1 1 1 1 Podoplanin Rax2 PF12768.7 ORF110875 - 0.0021 17.6 6.3 0.026 14.0 6.3 2.0 1 1 0 1 1 1 1 Cortical protein marker for cell polarity Mid2 PF04478.12 ORF110875 - 0.0031 17.4 0.5 0.0052 16.6 0.5 1.5 1 0 0 1 1 1 1 Mid2 like cell wall stress sensor EphA2_TM PF14575.6 ORF110875 - 0.0057 17.5 0.8 0.0057 17.5 0.8 1.7 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain Herpes_gE PF02480.16 ORF110875 - 0.006 15.4 0.0 0.0081 15.0 0.0 1.2 1 0 0 1 1 1 1 Alphaherpesvirus glycoprotein E CYYR1 PF10873.8 ORF110875 - 0.01 16.3 0.2 0.018 15.5 0.2 1.4 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 Shisa PF13908.6 ORF110875 - 0.024 14.9 0.6 0.044 14.0 0.6 1.5 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator OppC_N PF12911.7 ORF110875 - 0.031 14.3 1.1 0.067 13.2 0.7 1.8 2 0 0 2 2 1 0 N-terminal TM domain of oligopeptide transport permease C Insulin_TMD PF17870.1 ORF110875 - 0.045 13.8 2.0 0.12 12.5 2.0 1.7 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Amnionless PF14828.6 ORF110875 - 0.079 11.8 0.0 0.098 11.5 0.0 1.2 1 0 0 1 1 1 0 Amnionless DAG1 PF05454.11 ORF110875 - 0.1 12.0 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) RCR PF12273.8 ORF110875 - 0.24 12.1 0.3 0.24 12.1 0.3 1.8 2 0 0 2 2 2 0 Chitin synthesis regulation, resistance to Congo red PTP_tm PF18861.1 ORF110875 - 2.2 8.2 7.5 2.9 7.8 6.6 1.6 1 1 0 1 1 1 0 Transmembrane domain of protein tyrosine phosphatase, receptor type J CRF PF00473.17 ORF110638 - 0.16 12.1 0.6 0.49 10.5 0.4 1.9 2 0 0 2 2 2 0 Corticotropin-releasing factor family FlgH PF02107.16 ORF109644 - 2e-54 183.7 1.0 2.3e-54 183.5 1.0 1.0 1 0 0 1 1 1 1 Flagellar L-ring protein Ribonuc_red_sm PF00268.21 ORF109554 - 6.9e-73 245.5 0.4 8.6e-73 245.2 0.4 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain PP2C PF00481.21 ORF108940 - 5.2e-52 177.0 0.0 6.5e-52 176.7 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF108940 - 0.051 13.2 0.0 0.076 12.6 0.0 1.4 1 1 0 1 1 1 0 Protein phosphatase 2C Antimicrobial10 PF08105.11 ORF108940 - 0.14 12.2 0.8 0.26 11.4 0.1 1.8 2 0 0 2 2 2 0 Metchnikowin family GST_N PF02798.20 ORF106976 - 9e-10 38.8 0.1 2.3e-09 37.4 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF106976 - 2.1e-07 31.1 0.0 3.4e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF106976 - 0.01 16.2 0.0 0.024 15.1 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Ribosomal_L16 PF00252.18 ORF105516 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e LCE PF14672.6 ORF105368 - 2.8 8.6 10.1 8.6 7.0 10.1 1.9 1 0 0 1 1 1 0 Late cornified envelope Caps_synth PF05704.12 ORF102009 - 0.023 14.1 0.0 0.12 11.8 0.1 1.9 1 1 1 2 2 2 0 Capsular polysaccharide synthesis protein CBFD_NFYB_HMF PF00808.23 ORF101436 - 1.4e-21 76.5 0.8 2.6e-21 75.7 0.8 1.5 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF101436 - 2.2e-16 60.4 0.7 4.6e-16 59.4 0.7 1.6 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-X PF09415.10 ORF101436 - 0.052 13.9 0.1 0.13 12.6 0.1 1.7 1 0 0 1 1 1 0 CENP-S associating Centromere protein X PEX11 PF05648.14 ORF101312 - 3.2e-47 160.9 1.7 3.5e-47 160.7 1.7 1.0 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) Peroxin-22 PF12827.7 ORF101312 - 0.066 13.1 0.1 0.094 12.7 0.1 1.4 1 0 0 1 1 1 0 Peroxisomal biogenesis protein family PheRS_DBD2 PF18554.1 ORF101312 - 2.2 8.4 7.7 1.1 9.3 0.2 3.3 2 1 1 3 3 3 0 PheRS DNA binding domain 2 SF-assemblin PF06705.11 ORF10113 - 9.9e-05 21.8 17.5 0.00016 21.1 17.5 1.4 1 1 0 1 1 1 1 SF-assemblin/beta giardin GRAS PF03514.14 ORF10113 - 0.0093 14.9 3.2 0.018 14.0 3.2 1.4 1 0 0 1 1 1 1 GRAS domain family PSII_Pbs27 PF13326.6 ORF10113 - 0.077 13.3 3.9 0.084 13.2 2.6 2.0 1 1 1 2 2 2 0 Photosystem II Pbs27 BcrAD_BadFG PF01869.20 ORF10113 - 0.13 11.7 2.5 4.4 6.7 0.1 2.4 1 1 1 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family FliN_N PF16973.5 ORF10113 - 0.14 12.0 0.4 0.43 10.4 0.4 1.8 1 0 0 1 1 1 0 Flagellar motor switch protein FliN N-terminal Apolipoprotein PF01442.18 ORF10113 - 0.16 11.9 22.1 0.35 10.7 7.9 2.2 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF10113 - 0.37 10.8 1.6 11 6.1 0.2 2.6 1 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus IL17R_fnIII_D2 PF16578.5 ORF10113 - 3.2 8.3 5.8 0.63 10.6 1.7 1.9 2 0 0 2 2 2 0 Interleukin 17 receptor D Caskin-tail PF16632.5 ORF10113 - 4.9 7.6 7.9 1.2 9.6 0.9 2.9 3 1 1 4 4 4 0 C-terminal region of Caskin DUF87 PF01935.17 ORF10113 - 7.2 6.6 10.4 0.79 9.8 3.7 2.0 1 1 1 2 2 2 0 Helicase HerA, central domain IMD PF08397.11 ORF10113 - 8.9 5.6 18.4 1.2e+02 1.9 18.3 2.2 1 1 0 1 1 1 0 IRSp53/MIM homology domain GLTP PF08718.11 ORF100854 - 7.5e-16 58.7 0.1 1e-15 58.3 0.1 1.2 1 0 0 1 1 1 1 Glycolipid transfer protein (GLTP) TRI5 PF06330.11 NODE_32761_length_664_cov_2.553259_g26038_i0forward_frame_1 - 0.14 11.0 0.1 0.2 10.5 0.1 1.2 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) DUF2701 PF10857.8 NODE_32735_length_664_cov_118.643879_g26012_i0forward_frame_1 - 9.7 6.3 8.5 18 5.5 2.8 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2701) RCC1_2 PF13540.6 NODE_32734_length_664_cov_121.476948_g26011_i0reverse_frame_1 - 2.6e-06 27.1 12.8 0.55 10.1 0.1 4.6 4 1 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_32734_length_664_cov_121.476948_g26011_i0reverse_frame_1 - 0.00058 20.0 0.5 27 4.8 0.0 4.0 4 0 0 4 4 4 2 Uncharacterised ACR, YagE family COG1723 Apo-CIII PF05778.12 NODE_32734_length_664_cov_121.476948_g26011_i0reverse_frame_1 - 0.15 11.7 1.8 11 5.8 0.1 3.2 3 0 0 3 3 3 0 Apolipoprotein CIII (Apo-CIII) ESP PF16590.5 NODE_32709_length_664_cov_4242.182830_g19647_i3forward_frame_1 - 0.044 14.0 0.1 0.066 13.5 0.1 1.3 1 0 0 1 1 1 0 Exocrine gland-secreting peptide F_actin_cap_B PF01115.17 NODE_32697_length_665_cov_82.373016_g25976_i0forward_frame_1 - 0.0063 16.2 1.2 0.0075 15.9 0.1 1.8 2 1 0 2 2 2 1 F-actin capping protein, beta subunit RINGv PF12906.7 NODE_32685_length_665_cov_381.788889_g25965_i0reverse_frame_1 - 1.3e-13 50.9 6.3 2.5e-13 49.9 6.3 1.5 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 NODE_32685_length_665_cov_381.788889_g25965_i0reverse_frame_1 - 0.00059 20.0 4.0 0.00059 20.0 4.0 1.9 2 0 0 2 2 2 1 FANCL C-terminal domain zf-RING_2 PF13639.6 NODE_32685_length_665_cov_381.788889_g25965_i0reverse_frame_1 - 0.0095 16.3 5.0 0.02 15.2 5.0 1.6 1 1 0 1 1 1 1 Ring finger domain DUF587 PF04532.12 NODE_32685_length_665_cov_381.788889_g25965_i0reverse_frame_1 - 0.013 14.7 0.5 0.074 12.3 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF587) PTSIIB_sorb PF03830.15 NODE_32667_length_666_cov_3.076070_g25949_i0forward_frame_1 - 1.7e-32 112.7 0.3 2.9e-32 112.0 0.3 1.4 1 0 0 1 1 1 1 PTS system sorbose subfamily IIB component EIIA-man PF03610.16 NODE_32667_length_666_cov_3.076070_g25949_i0forward_frame_1 - 3.6e-25 88.5 0.0 6.2e-25 87.7 0.0 1.4 1 0 0 1 1 1 1 PTS system fructose IIA component Requiem_N PF14051.6 NODE_32644_length_666_cov_245.309033_g25932_i0reverse_frame_1 - 0.0091 16.2 0.8 0.07 13.3 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of DPF2/REQ. Pro_racemase PF05544.11 NODE_32631_length_666_cov_24631.866878_g25922_i0reverse_frame_1 - 0.0039 16.3 0.0 0.0048 16.0 0.0 1.2 1 0 0 1 1 1 1 Proline racemase Pkinase PF00069.25 NODE_32631_length_666_cov_24631.866878_g25922_i0forward_frame_1 - 1.4e-31 109.9 0.0 7.6e-31 107.4 0.0 1.8 1 1 1 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_32631_length_666_cov_24631.866878_g25922_i0forward_frame_1 - 2.2e-18 66.5 0.0 3.1e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_32631_length_666_cov_24631.866878_g25922_i0forward_frame_1 - 0.0041 16.5 0.0 0.026 13.9 0.1 2.0 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family S-methyl_trans PF02574.16 NODE_32625_length_667_cov_4.370253_g25916_i0reverse_frame_3 - 1.5e-35 123.3 0.0 1.8e-35 123.0 0.0 1.1 1 0 0 1 1 1 1 Homocysteine S-methyltransferase Ribosomal_S13_N PF08069.12 NODE_32625_length_667_cov_4.370253_g25916_i0forward_frame_2 - 0.056 13.5 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Ribosomal S13/S15 N-terminal domain MT PF12777.7 NODE_32622_length_667_cov_31.966772_g25913_i0reverse_frame_3 - 6.2e-05 22.2 0.1 7.9e-05 21.8 0.1 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Ribosomal_S8 PF00410.19 NODE_32622_length_667_cov_31.966772_g25913_i0reverse_frame_3 - 0.00068 19.6 0.1 0.0012 18.7 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein S8 DUF4476 PF14771.6 NODE_32622_length_667_cov_31.966772_g25913_i0reverse_frame_3 - 0.056 13.7 0.7 0.21 11.9 0.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4476) DUF4079 PF13301.6 NODE_32622_length_667_cov_31.966772_g25913_i0forward_frame_3 - 0.033 14.3 0.3 0.064 13.4 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) BRE1 PF08647.11 NODE_32621_length_667_cov_60.466772_g25912_i0forward_frame_2 - 0.34 11.0 12.8 0.77 9.9 7.7 2.7 2 1 1 3 3 3 0 BRE1 E3 ubiquitin ligase PDZ_2 PF13180.6 NODE_32617_length_667_cov_77.571203_g25908_i0reverse_frame_3 - 7.4e-10 39.0 0.0 1.2e-09 38.3 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 NODE_32617_length_667_cov_77.571203_g25908_i0reverse_frame_3 - 1.2e-06 28.8 0.0 1.9e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 NODE_32617_length_667_cov_77.571203_g25908_i0reverse_frame_3 - 1.5e-06 27.9 0.1 3.3e-06 26.8 0.1 1.6 1 0 0 1 1 1 1 PDZ domain Ydc2-catalyt PF09159.10 NODE_32610_length_667_cov_160.653481_g25901_i0forward_frame_2 - 0.12 12.1 0.1 0.16 11.7 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 H2TH PF06831.14 NODE_32602_length_667_cov_212.449367_g25893_i0reverse_frame_3 - 0.064 13.2 0.1 0.14 12.1 0.1 1.6 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain DUF5519 PF17648.1 NODE_32574_length_668_cov_3.763033_g25871_i0reverse_frame_3 - 0.048 13.5 0.3 1.1 9.2 0.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5519) Methyltrn_RNA_4 PF09936.9 NODE_32574_length_668_cov_3.763033_g25871_i0forward_frame_3 - 0.046 13.6 0.0 0.062 13.2 0.0 1.2 1 0 0 1 1 1 0 SAM-dependent RNA methyltransferase C1_1 PF00130.22 NODE_32529_length_669_cov_3.529968_g25833_i0reverse_frame_3 - 0.004 17.0 4.9 0.007 16.2 4.9 1.4 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) CBP_BcsG PF11658.8 NODE_32529_length_669_cov_3.529968_g25833_i0forward_frame_2 - 6.5e-87 292.1 0.0 7.2e-87 291.9 0.0 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG GGACT PF06094.12 NODE_32518_length_669_cov_86.671924_g25823_i0forward_frame_3 - 1.7e-10 41.5 0.0 3.6e-10 40.5 0.0 1.5 1 1 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 NODE_32518_length_669_cov_86.671924_g25823_i0forward_frame_3 - 5.1e-05 23.6 0.8 0.00016 22.0 0.1 2.1 2 1 0 3 3 3 1 AIG2-like family Response_reg PF00072.24 ORF99466 - 1.1e-25 90.0 0.0 1.4e-25 89.6 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 ORF99466 - 5.8e-21 74.4 0.3 1.8e-20 72.8 0.0 2.0 2 1 1 3 3 3 1 Transcriptional regulatory protein, C terminal NgoMIV_restric PF09015.10 ORF99466 - 0.046 12.8 0.0 0.068 12.3 0.0 1.2 1 0 0 1 1 1 0 NgoMIV restriction enzyme RRM_1 PF00076.22 ORF98171 - 8.1e-09 35.2 0.0 1.2e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF98171 - 0.021 14.4 0.0 0.032 13.8 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCCH_2 PF14608.6 ORF98171 - 0.17 12.4 6.6 0.41 11.2 1.9 2.3 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger RRM_7 PF16367.5 ORF98171 - 0.2 11.8 0.0 0.32 11.2 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif AhpC-TSA PF00578.21 ORF95619 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF95619 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF95619 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF95619 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC HAD_2 PF13419.6 ORF95122 - 2.9e-26 92.7 0.0 3.7e-26 92.3 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF95122 - 6.5e-17 62.5 0.0 1.7e-15 57.9 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF95122 - 2.4e-10 41.2 0.0 3e-10 40.8 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF95122 - 5.7e-06 26.3 0.0 4.3e-05 23.5 0.0 2.3 3 0 0 3 3 3 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 ORF95122 - 0.00014 21.9 0.1 0.0008 19.5 0.1 2.2 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase DUF2623 PF11115.8 ORF95122 - 0.17 12.0 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2623) Ribosomal_L9_N PF01281.19 ORF93738 - 9.4e-06 25.1 0.0 2.1e-05 24.0 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain Ribosomal_L9_C PF03948.14 ORF93738 - 0.049 14.1 0.0 0.2 12.1 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L9, C-terminal domain SHIPPO-rpt PF07004.12 ORF91670 - 1.9e-15 56.9 40.4 0.0025 18.7 0.8 6.9 6 1 0 6 6 6 6 Sperm-tail PG-rich repeat UCH PF00443.29 ORF8800 - 2.3e-19 69.9 0.7 2.8e-19 69.6 0.7 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF8800 - 1.5e-06 28.1 0.7 2.2e-06 27.5 0.7 1.3 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-MIZ PF02891.20 ORF8800 - 0.003 17.3 0.3 0.006 16.3 0.3 1.5 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger zinc_ribbon_11 PF11682.8 ORF8800 - 0.032 14.2 1.2 0.066 13.2 1.2 1.5 1 0 0 1 1 1 0 Probable zinc-ribbon Sec63 PF02889.16 ORF86010 - 4.5e-10 39.1 0.0 7.2e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Sec63 Brl domain DEAD PF00270.29 ORF86010 - 0.0011 18.8 0.0 0.0016 18.2 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase T2SSE PF00437.20 ORF86010 - 0.0085 15.2 0.0 0.011 14.8 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein Yip1 PF04893.17 ORF85855 - 2.4e-16 59.9 15.1 3.8e-16 59.3 14.9 1.3 1 1 0 1 1 1 1 Yip1 domain Ammonium_transp PF00909.21 ORF85490 - 5.1e-39 134.1 6.9 6.2e-39 133.8 6.9 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks85.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks85.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks85.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks85.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:19:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NMT PF01233.19 ORF83777 - 7.9e-41 139.6 0.0 7.9e-41 139.6 0.0 1.5 2 0 0 2 2 2 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Laminin_II PF06009.12 ORF83777 - 0.0025 17.8 3.3 0.0037 17.3 3.3 1.2 1 0 0 1 1 1 1 Laminin Domain II UvrD_C PF13361.6 ORF83777 - 0.012 15.0 3.6 0.017 14.5 3.6 1.2 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain TMPIT PF07851.13 ORF83777 - 0.064 12.5 8.3 0.086 12.1 8.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein Dfp1_Him1_M PF08630.10 ORF83777 - 0.072 13.3 6.5 0.04 14.1 2.9 2.0 2 0 0 2 2 2 0 Dfp1/Him1, central region Viral_Beta_CD PF04530.12 ORF83777 - 0.096 13.0 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Viral Beta C/D like family DUF3450 PF11932.8 ORF83777 - 0.21 10.8 7.6 0.32 10.3 7.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF948 PF06103.11 ORF83777 - 0.24 11.7 4.0 0.42 10.9 4.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) TipAS PF07739.13 ORF83777 - 0.46 11.1 6.1 0.32 11.6 2.8 2.0 2 0 0 2 2 2 0 TipAS antibiotic-recognition domain FliD_C PF07195.12 ORF83777 - 0.53 9.7 9.9 0.22 10.9 7.3 1.6 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 C-terminus DUF4200 PF13863.6 ORF83777 - 0.61 10.5 14.2 0.98 9.8 14.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) V_ATPase_I PF01496.19 ORF83777 - 0.79 7.6 4.6 0.77 7.6 4.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Goodbye PF17109.5 ORF83777 - 1.5 9.3 3.9 2.7 8.5 3.5 1.6 2 0 0 2 2 1 0 fungal STAND N-terminal Goodbye domain XhlA PF10779.9 ORF83777 - 1.6 9.0 6.4 3.4 8.0 6.4 1.6 1 0 0 1 1 1 0 Haemolysin XhlA CENP-H PF05837.12 ORF83777 - 1.8 9.0 8.8 2.8 8.4 8.8 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Com_YlbF PF06133.11 ORF83777 - 3.8 8.2 17.2 4.3 8.0 15.0 2.1 2 1 0 2 2 1 0 Control of competence regulator ComK, YlbF/YmcA GET2 PF08690.10 ORF83777 - 3.9 7.1 9.9 4.8 6.8 9.9 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 GTP_cyclohydroI PF01227.22 ORF83706 - 2e-62 209.8 0.4 2.4e-62 209.5 0.4 1.1 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.6 ORF83706 - 0.051 13.7 0.0 0.095 12.9 0.0 1.4 1 0 0 1 1 1 0 QueF-like protein EF-hand_5 PF13202.6 ORF81675 - 1.3e-06 27.7 0.2 2.2e-06 26.9 0.2 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF81675 - 5.6e-05 22.7 0.1 0.00011 21.9 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF81675 - 9.2e-05 22.2 0.0 0.00019 21.2 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF81675 - 0.00013 21.3 0.0 0.00024 20.4 0.0 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF81675 - 0.0055 17.1 0.0 0.0081 16.6 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair LysR_substrate PF03466.20 ORF80277 - 5.1e-32 110.9 0.0 6.1e-32 110.7 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain PBP_like PF12727.7 ORF80277 - 0.085 12.0 0.0 0.15 11.2 0.0 1.4 1 0 0 1 1 1 0 PBP superfamily domain BPD_transp_1 PF00528.22 ORF79355 - 3.8e-13 49.6 10.5 3.8e-13 49.6 10.5 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Claudin_2 PF13903.6 ORF79355 - 2.2 8.0 7.5 0.33 10.7 2.2 2.0 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction Myb_DNA-bind_2 PF08914.11 ORF76607 - 6.5e-15 55.1 2.1 1.1e-14 54.3 2.1 1.4 1 0 0 1 1 1 1 Rap1 Myb domain BRCT_2 PF16589.5 ORF76607 - 0.00014 22.2 0.0 0.00025 21.4 0.0 1.5 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain Aminotran_3 PF00202.21 ORF7652 - 1.6e-71 241.1 0.0 1.8e-71 241.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Methyltransf_3 PF01596.17 ORF75573 - 1.7e-66 223.4 0.2 2.1e-66 223.1 0.2 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF75573 - 2e-12 48.1 0.0 3.1e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF75573 - 1e-06 28.7 0.0 1.7e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF75573 - 0.00017 22.2 0.0 0.00034 21.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF75573 - 0.00082 19.2 0.0 0.0012 18.7 0.0 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 ORF75573 - 0.023 14.0 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF75573 - 0.026 13.8 0.0 0.035 13.4 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Gln-synt_C PF00120.24 ORF75573 - 0.034 13.2 0.0 0.066 12.2 0.0 1.3 2 0 0 2 2 2 0 Glutamine synthetase, catalytic domain Methyltransf_18 PF12847.7 ORF75573 - 0.054 13.4 0.0 0.26 11.2 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF75573 - 0.084 13.5 0.0 0.23 12.1 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain EF-hand_5 PF13202.6 ORF75246 - 1.3e-06 27.7 0.2 2.2e-06 26.9 0.2 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF75246 - 5.6e-05 22.7 0.1 0.00011 21.9 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF75246 - 9.2e-05 22.2 0.0 0.00019 21.2 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF75246 - 0.00013 21.3 0.0 0.00024 20.4 0.0 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF75246 - 0.0055 17.1 0.0 0.0081 16.6 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair GST_N_3 PF13417.6 ORF74146 - 1.6e-15 57.3 0.0 2.8e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF74146 - 1.8e-11 44.2 0.0 3.6e-11 43.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF74146 - 2.2e-08 34.3 0.0 4.1e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF74146 - 3.2e-08 33.7 0.0 5.3e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF74146 - 9.2e-05 22.6 0.0 0.00015 21.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF74146 - 0.00081 19.4 0.1 0.003 17.5 0.1 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF74146 - 0.073 13.8 0.0 0.16 12.7 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain ArsB PF02040.15 ORF73846 - 4.9e-81 273.2 10.5 5.4e-81 273.1 10.5 1.0 1 0 0 1 1 1 1 Arsenical pump membrane protein CitMHS PF03600.16 ORF73846 - 1.6e-08 34.1 15.9 1.6e-08 34.1 15.9 2.1 1 1 1 2 2 2 1 Citrate transporter TctB PF07331.11 ORF73846 - 0.0029 17.9 8.0 0.0029 17.9 8.0 2.5 1 1 0 2 2 2 1 Tripartite tricarboxylate transporter TctB family Ank_2 PF12796.7 ORF72065 - 2e-56 188.5 6.0 1.4e-18 67.2 0.1 3.7 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF72065 - 1.4e-28 98.9 12.1 9.2e-09 35.7 0.0 5.0 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF72065 - 3.1e-28 97.5 5.1 3.5e-09 36.7 0.0 5.7 1 1 5 6 6 6 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF72065 - 3.4e-28 94.6 1.3 0.00075 19.8 0.0 7.1 6 1 1 7 7 7 7 Ankyrin repeat Ank PF00023.30 ORF72065 - 2.8e-27 93.9 10.1 2.2e-05 24.7 0.0 7.1 6 1 1 7 7 7 6 Ankyrin repeat VWA_3_C PF18571.1 ORF72065 - 0.0016 18.2 5.2 4.9 7.1 0.0 4.3 4 0 0 4 4 4 2 von Willebrand factor type A C-terminal domain TAL_FSA PF00923.19 ORF71513 - 8.7e-44 150.0 0.1 1.7e-43 149.0 0.1 1.4 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase DUF3755 PF12579.8 ORF70444 - 0.049 13.3 3.6 0.59 9.8 0.0 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3755) Radical_SAM PF04055.21 ORF69468 - 0.00054 20.4 0.0 0.00073 19.9 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily zf-H2C2_2 PF13465.6 ORF69234 - 3.3e-06 27.3 4.3 3.3e-06 27.3 4.3 3.4 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF69234 - 1.1e-05 25.6 2.1 1.1e-05 25.6 2.1 3.1 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF69234 - 0.00033 21.3 1.3 0.00033 21.3 1.3 2.9 3 0 0 3 3 3 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF69234 - 0.014 15.1 1.3 0.063 13.0 0.1 2.4 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-BED PF02892.15 ORF69234 - 0.043 13.8 3.3 0.043 13.8 3.3 2.4 1 1 1 2 2 2 0 BED zinc finger zf-met PF12874.7 ORF69234 - 0.16 12.4 0.9 0.16 12.4 0.9 2.8 3 0 0 3 3 3 0 Zinc-finger of C2H2 type EF1G PF00647.19 ORF69234 - 0.16 12.0 2.2 0.18 11.9 0.3 2.1 2 2 0 2 2 2 0 Elongation factor 1 gamma, conserved domain zf-C2H2_jaz PF12171.8 ORF69234 - 1.9 8.8 12.1 0.43 10.9 0.5 3.5 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding Polysacc_deac_2 PF04748.13 ORF68364 - 2e-46 157.9 0.1 2.4e-46 157.6 0.1 1.1 1 0 0 1 1 1 1 Divergent polysaccharide deacetylase ARS2 PF04959.13 ORF67905 - 5.8 7.2 8.2 8.9 6.6 8.2 1.3 1 0 0 1 1 1 0 Arsenite-resistance protein 2 Zip PF02535.22 ORF66601 - 2.1e-24 86.4 6.2 2.1e-24 86.4 6.2 1.8 1 1 1 2 2 2 1 ZIP Zinc transporter DUF643 PF04867.12 ORF64485 - 0.036 14.7 0.3 0.13 12.9 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF643) Clp_N PF02861.20 ORF64485 - 0.049 13.8 1.4 0.08 13.1 0.2 2.0 2 0 0 2 2 2 0 Clp amino terminal domain, pathogenicity island component MMR_HSR1_Xtn PF16897.5 ORF64485 - 0.22 11.5 2.3 0.89 9.6 1.2 2.4 1 1 1 2 2 2 0 C-terminal region of MMR_HSR1 domain Rh5 PF18515.1 ORF63566 - 0.0047 16.3 4.5 0.0069 15.7 4.5 1.3 1 0 0 1 1 1 1 Rh5 coiled-coil domain WXG100 PF06013.12 ORF63566 - 0.15 12.4 0.0 11 6.4 0.0 2.3 2 0 0 2 2 2 0 Proteins of 100 residues with WXG BRAP2 PF07576.12 ORF63566 - 0.29 11.4 2.4 0.32 11.2 0.9 1.9 2 0 0 2 2 2 0 BRCA1-associated protein 2 DUF2292 PF10055.9 ORF63009 - 0.061 13.0 0.2 0.56 9.9 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized small protein (DUF2292) DUF1007 PF06226.13 ORF62366 - 0.16 11.9 0.0 0.29 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1007) Apt1 PF10351.9 ORF62366 - 1 8.1 12.8 1 8.1 12.8 1.2 1 0 0 1 1 1 0 Golgi-body localisation protein domain Pkinase PF00069.25 ORF59533 - 2.5e-34 118.8 0.0 2.9e-34 118.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF59533 - 4.4e-23 81.9 0.0 5.6e-23 81.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF59533 - 3.6e-05 22.7 0.0 5e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF59533 - 0.0039 16.5 0.0 0.0057 16.0 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF59533 - 0.017 14.5 0.1 0.022 14.1 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family WAPL PF07814.13 ORF59533 - 0.13 11.1 0.0 0.13 11.0 0.0 1.1 1 0 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin APH PF01636.23 ORF59533 - 0.47 10.3 4.7 0.21 11.5 2.3 1.7 1 1 1 2 2 2 0 Phosphotransferase enzyme family SF-assemblin PF06705.11 ORF58539 - 1.2e-20 73.9 12.3 1.5e-20 73.6 12.3 1.0 1 0 0 1 1 1 1 SF-assemblin/beta giardin DUF842 PF05811.13 ORF58539 - 0.0095 15.6 1.2 0.0095 15.6 1.2 2.2 1 1 0 2 2 2 1 Eukaryotic protein of unknown function (DUF842) Dict-STAT-coil PF09267.10 ORF58539 - 0.018 15.4 0.3 0.018 15.4 0.3 2.5 3 0 0 3 3 3 0 Dictyostelium STAT, coiled coil Gal11_ABD1 PF18535.1 ORF58539 - 0.037 14.1 0.0 0.11 12.6 0.0 1.8 1 0 0 1 1 1 0 Gal11 activator-binding domain (ABD1) Ada3 PF10198.9 ORF58539 - 0.04 14.0 8.1 0.3 11.2 4.6 3.1 1 1 1 2 2 2 0 Histone acetyltransferases subunit 3 Snapin_Pallidin PF14712.6 ORF58539 - 0.081 13.3 10.3 0.34 11.3 3.2 3.3 2 2 1 3 3 3 0 Snapin/Pallidin Phage_Mu_Gam PF07352.12 ORF58539 - 0.18 11.7 10.6 0.1 12.5 2.9 2.3 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein Baculo_PEP_C PF04513.12 ORF58539 - 0.32 11.0 1.8 15 5.6 0.1 2.5 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3584 PF12128.8 ORF58539 - 0.45 8.0 21.0 0.58 7.6 21.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) WAC_Acf1_DNA_bd PF10537.9 ORF58539 - 0.69 10.5 5.3 0.24 11.9 1.4 2.1 1 1 1 2 2 2 0 ATP-utilising chromatin assembly and remodelling N-terminal DUF2405 PF10293.9 ORF58539 - 0.82 9.6 5.8 0.1 12.5 1.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF2405) LCIB_C_CA PF18599.1 ORF58539 - 1.7 7.9 6.8 8.3 5.6 1.6 2.1 1 1 0 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases DUF724 PF05266.14 ORF58539 - 2.3 8.0 12.9 4.5 7.1 5.9 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF724) Fib_alpha PF08702.10 ORF58539 - 3 8.0 11.0 78 3.4 10.4 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family FUSC PF04632.12 ORF58539 - 3.4 6.1 13.0 5.3 5.5 13.0 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF4407 PF14362.6 ORF58539 - 5.5 6.3 18.8 0.36 10.1 3.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF2570 PF10828.8 ORF58539 - 6.7 6.6 10.9 1.9 8.3 3.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) COG2 PF06148.11 ORF58539 - 8.1 6.5 13.8 14 5.8 2.7 2.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Penicil_amidase PF01804.18 ORF58433 - 4.8e-31 108.5 0.0 5.6e-31 108.2 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase RRM_1 PF00076.22 ORF5761 - 7.8e-09 35.2 0.0 2.5e-08 33.6 0.0 1.9 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DHHC PF01529.20 ORF57065 - 6.2 6.9 9.2 2.6 8.2 4.2 2.1 2 0 0 2 2 2 0 DHHC palmitoyltransferase Mito_carr PF00153.27 ORF56142 - 5.4e-31 106.4 0.6 9.4e-14 51.1 0.3 3.0 2 1 1 3 3 3 3 Mitochondrial carrier protein Tim17 PF02466.19 ORF56142 - 0.00019 21.8 1.2 0.67 10.4 0.7 2.3 1 1 0 2 2 2 2 Tim17/Tim22/Tim23/Pmp24 family DUF3755 PF12579.8 ORF55959 - 0.049 13.3 3.6 0.59 9.8 0.0 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3755) CCG PF02754.16 ORF5554 - 9.5e-27 93.0 0.1 2.9e-14 53.0 0.0 2.2 2 0 0 2 2 2 2 Cysteine-rich domain AhpC-TSA PF00578.21 ORF53163 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF53163 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF53163 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF53163 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC DUF986 PF06173.12 ORF52274 - 0.023 14.8 0.5 0.047 13.8 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF986) Pox_EPC_I2-L1 PF12575.8 ORF52274 - 0.089 13.0 7.1 2.5 8.4 3.5 2.7 2 1 0 2 2 2 0 Poxvirus entry protein complex L1 and I2 Herpes_UL73 PF03554.13 ORF52274 - 0.14 12.1 0.3 0.28 11.2 0.3 1.4 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein TMEM18 PF14770.6 ORF51476 - 0.014 15.4 1.2 0.014 15.4 1.2 2.0 1 1 1 2 2 2 0 Transmembrane protein 18 DUF3481 PF11980.8 ORF50164 - 0.0071 16.0 0.0 0.014 15.1 0.0 1.5 1 0 0 1 1 1 1 C-terminal domain of neuropilin glycoprotein TRP PF06011.12 ORF50164 - 0.013 14.3 3.6 0.016 14.0 3.6 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel LRR19-TM PF15176.6 ORF50164 - 0.026 14.5 0.6 0.085 12.9 0.1 2.2 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain DUF2976 PF11190.8 ORF50164 - 0.056 13.2 0.5 0.22 11.4 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) DUF4834 PF16118.5 ORF50164 - 0.1 13.6 0.0 0.1 13.6 0.0 2.7 2 2 1 3 3 3 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 ORF50164 - 0.29 12.0 1.2 1 10.2 0.0 2.5 3 1 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain ER_lumen_recept PF00810.18 ORF50164 - 0.59 11.0 7.5 0.65 10.8 6.1 1.6 1 1 1 2 2 2 0 ER lumen protein retaining receptor DUF4407 PF14362.6 ORF48440 - 0.0013 18.2 3.1 0.0015 17.9 3.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) FapA PF03961.13 ORF48440 - 0.002 16.8 9.4 0.0025 16.5 9.4 1.3 1 0 0 1 1 1 1 Flagellar Assembly Protein A BLOC1_2 PF10046.9 ORF48440 - 0.032 14.5 10.9 0.16 12.3 2.0 2.8 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Snapin_Pallidin PF14712.6 ORF48440 - 0.055 13.9 7.9 0.72 10.3 0.1 2.9 2 1 1 3 3 3 0 Snapin/Pallidin Fib_alpha PF08702.10 ORF48440 - 0.11 12.7 15.4 1.6 8.9 0.6 2.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF3086 PF11285.8 ORF48440 - 0.18 10.8 2.5 0.22 10.6 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) MscS_porin PF12795.7 ORF48440 - 0.32 10.5 4.1 7.8 6.0 0.6 2.9 2 1 1 3 3 3 0 Mechanosensitive ion channel porin domain YkyA PF10368.9 ORF48440 - 0.53 9.9 16.8 1.1 8.9 1.8 2.5 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein Nup54 PF13874.6 ORF48440 - 0.76 9.9 5.5 1.3 9.1 4.0 2.2 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 DASH_Dam1 PF08653.10 ORF48440 - 1.4 8.8 5.0 1.5 8.7 0.0 3.1 3 1 1 4 4 4 0 DASH complex subunit Dam1 MCPsignal PF00015.21 ORF48440 - 1.5 8.6 7.4 9.3 6.0 1.8 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Spc7 PF08317.11 ORF48440 - 1.7 7.5 14.2 3.4 6.5 14.2 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein CpxA_peri PF16527.5 ORF48440 - 1.7 9.0 5.3 1.1 9.7 1.3 2.0 2 0 0 2 2 2 0 Two-component sensor protein CpxA, periplasmic domain V_ATPase_I PF01496.19 ORF48440 - 2.1 6.2 10.9 3.7 5.3 10.4 1.5 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family HSBP1 PF06825.12 ORF48440 - 2.1 8.3 8.4 13 5.7 1.1 3.2 2 1 1 3 3 3 0 Heat shock factor binding protein 1 DUF948 PF06103.11 ORF48440 - 2.3 8.6 8.0 38 4.6 5.2 2.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Occludin_ELL PF07303.13 ORF48440 - 3.9 8.2 9.3 37 5.1 1.4 3.5 1 1 2 3 3 3 0 Occludin homology domain DUF2203 PF09969.9 ORF48440 - 4.3 8.1 6.6 10 6.9 4.7 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) ALMT PF11744.8 ORF48440 - 4.8 5.9 10.4 6.1 5.5 10.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter NPV_P10 PF05531.12 ORF48440 - 6.9 7.2 8.8 11 6.6 0.4 3.2 2 1 1 4 4 4 0 Nucleopolyhedrovirus P10 protein RAMP4 PF06624.12 ORF47670 - 0.059 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Ran_BP1 PF00638.18 ORF4681 - 1.3e-32 112.6 2.6 2.2e-32 111.9 2.6 1.3 1 0 0 1 1 1 1 RanBP1 domain STAT_bind PF02864.15 ORF4681 - 0.094 13.3 0.6 0.19 12.3 0.1 1.7 1 1 1 2 2 2 0 STAT protein, DNA binding domain Abhydrolase_1 PF00561.20 ORF44613 - 9.4e-20 71.3 0.0 1.2e-19 70.9 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF44613 - 5.5e-12 45.5 0.0 7.5e-12 45.0 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF44613 - 6.4e-11 43.3 0.0 7.8e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 ORF44613 - 0.0011 18.5 0.0 0.0015 18.1 0.0 1.2 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Abhydrolase_5 PF12695.7 ORF44613 - 0.0028 17.4 0.0 0.0092 15.8 0.0 1.8 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_8 PF06259.12 ORF44613 - 0.011 15.4 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase DUF915 PF06028.11 ORF44613 - 0.035 13.5 0.0 4.1 6.7 0.0 2.3 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) Ndr PF03096.14 ORF44613 - 0.048 12.3 0.0 0.056 12.1 0.0 1.2 1 0 0 1 1 1 0 Ndr family Ser_hydrolase PF06821.13 ORF44613 - 0.09 12.6 0.0 0.4 10.5 0.0 1.8 2 0 0 2 2 2 0 Serine hydrolase Chlorophyllase2 PF12740.7 ORF44613 - 0.12 11.2 0.0 0.2 10.6 0.0 1.4 1 0 0 1 1 1 0 Chlorophyllase enzyme PGAP1 PF07819.13 ORF44613 - 0.2 11.4 0.0 0.66 9.7 0.0 1.8 2 0 0 2 2 2 0 PGAP1-like protein Thioesterase PF00975.20 ORF44613 - 0.55 10.3 2.0 6 6.9 2.0 2.1 1 1 0 1 1 1 0 Thioesterase domain Importin_rep PF18773.1 ORF44613 - 1.4 8.7 3.9 2.9 7.7 0.0 2.7 3 0 0 3 3 3 0 Importin 13 repeat UCH PF00443.29 ORF42930 - 2.3e-19 69.9 0.7 2.8e-19 69.6 0.7 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF42930 - 1.5e-06 28.1 0.7 2.2e-06 27.5 0.7 1.3 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-MIZ PF02891.20 ORF42930 - 0.003 17.3 0.3 0.006 16.3 0.3 1.5 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger zinc_ribbon_11 PF11682.8 ORF42930 - 0.032 14.2 1.2 0.066 13.2 1.2 1.5 1 0 0 1 1 1 0 Probable zinc-ribbon ARS2 PF04959.13 ORF40899 - 5.8 7.2 8.2 8.9 6.6 8.2 1.3 1 0 0 1 1 1 0 Arsenite-resistance protein 2 Methyltransf_3 PF01596.17 ORF39855 - 7.6e-67 224.6 0.2 9.1e-67 224.3 0.2 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF39855 - 2.1e-12 48.0 0.0 3.3e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF39855 - 1.1e-06 28.5 0.0 1.7e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF39855 - 0.00029 21.5 0.0 0.00051 20.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF39855 - 0.0035 17.1 0.0 0.0049 16.6 0.0 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 ORF39855 - 0.014 14.7 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 ORF39855 - 0.023 14.0 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF39855 - 0.058 13.3 0.0 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF39855 - 0.072 13.8 0.0 0.18 12.5 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain CDH PF02611.15 ORF37943 - 4.5e-78 261.9 0.1 5.2e-73 245.4 0.0 2.0 1 1 1 2 2 2 2 CDP-diacylglycerol pyrophosphatase PIP5K PF01504.18 ORF3547 - 1.5e-35 122.7 4.4 1.7e-35 122.6 4.4 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Prenyltransf PF01255.19 ORF35230 - 2.7e-68 229.9 0.0 3e-68 229.7 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Vps52 PF04129.12 ORF34236 - 2.5e-30 105.7 13.9 2.8e-30 105.5 13.9 1.0 1 0 0 1 1 1 1 Vps52 / Sac2 family Sec3_C PF09763.9 ORF34236 - 1.6e-11 43.3 14.8 1.9e-11 43.1 14.8 1.0 1 0 0 1 1 1 1 Exocyst complex component Sec3 PLU-1 PF08429.11 ORF34236 - 0.0045 16.2 5.7 0.015 14.5 5.2 1.8 1 1 1 2 2 2 2 PLU-1-like protein HAP1_N PF04849.13 ORF34236 - 0.0062 15.8 0.9 0.0062 15.8 0.9 2.0 1 1 0 2 2 2 1 HAP1 N-terminal conserved region MCPsignal PF00015.21 ORF34236 - 0.042 13.7 0.8 2.2 8.0 0.0 2.2 2 0 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain PepSY_like PF11396.8 ORF34236 - 0.047 14.2 3.9 3.6 8.2 0.1 2.5 2 0 0 2 2 2 0 Putative beta-lactamase-inhibitor-like, PepSY-like Med7 PF05983.11 ORF34236 - 0.06 13.4 1.7 0.14 12.2 1.7 1.8 1 1 0 1 1 1 0 MED7 protein DUF2203 PF09969.9 ORF34236 - 0.067 13.9 2.4 2.4 8.9 0.1 2.6 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) DUF1664 PF07889.12 ORF34236 - 0.16 12.0 5.0 0.2 11.7 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF948 PF06103.11 ORF34236 - 0.17 12.2 1.5 1.4 9.2 0.5 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Laminin_II PF06009.12 ORF34236 - 0.26 11.3 7.9 0.93 9.5 0.4 2.4 1 1 2 3 3 3 0 Laminin Domain II XhlA PF10779.9 ORF34236 - 2 8.7 7.1 1.5 9.0 0.3 3.0 2 1 1 3 3 3 0 Haemolysin XhlA AhpC-TSA PF00578.21 ORF32841 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF32841 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF32841 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF32841 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC PspA_IM30 PF04012.12 ORF32412 - 9.8e-48 162.6 32.6 1.2e-47 162.4 32.6 1.0 1 0 0 1 1 1 1 PspA/IM30 family DUF3367 PF11847.8 ORF32412 - 0.44 8.3 3.1 0.35 8.7 0.6 1.7 1 1 0 2 2 2 0 Alpha-(1->3)-arabinofuranosyltransferase rRNA_proc-arch PF13234.6 ORF32412 - 1.6 8.6 12.5 0.077 12.9 0.9 2.4 1 1 0 2 2 2 0 rRNA-processing arch domain FlaC_arch PF05377.11 ORF32412 - 4.1 7.9 7.4 5.4 7.5 0.3 3.6 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) CHDCT2 PF08074.11 ORF32412 - 5.4 7.2 16.5 2.3 8.4 3.4 2.5 1 1 1 2 2 2 0 CHDCT2 (NUC038) domain FHIPEP PF00771.20 ORF31351 - 6.2e-45 153.9 0.3 6.9e-45 153.7 0.3 1.0 1 0 0 1 1 1 1 FHIPEP family AhpC-TSA PF00578.21 ORF31006 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF31006 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF31006 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF31006 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC DHHC PF01529.20 ORF28449 - 6.8 6.8 9.0 2.6 8.2 4.2 2.1 2 0 0 2 2 2 0 DHHC palmitoyltransferase His_Phos_2 PF00328.22 ORF25939 - 0.03 13.7 0.2 0.034 13.5 0.2 1.2 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) DUF4250 PF14056.6 ORF25939 - 0.14 12.1 2.4 0.19 11.7 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) AhpC-TSA PF00578.21 ORF22410 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF22410 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF22410 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF22410 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC AGA2 PF17366.2 ORF20858 - 0.059 13.1 1.3 3 7.6 0.0 3.5 4 0 0 4 4 4 0 A-agglutinin-binding subunit Aga2 RuBisCo_chap_C PF18087.1 ORF20858 - 0.44 10.2 4.7 3.3 7.4 0.2 2.9 3 0 0 3 3 3 0 Rubisco Assembly chaperone C-terminal domain Inhibitor_I68 PF10468.9 ORF19783 - 0.056 13.8 7.2 0.51 10.8 0.3 2.3 2 0 0 2 2 2 0 Carboxypeptidase inhibitor I68 Syntaxin-6_N PF09177.11 ORF18662 - 4.7e-12 46.3 2.4 4.7e-12 46.3 2.4 2.6 1 1 1 2 2 2 1 Syntaxin 6, N-terminal PsiA PF06952.11 ORF18662 - 0.08 12.2 5.1 0.12 11.6 5.1 1.2 1 0 0 1 1 1 0 PsiA protein XhlA PF10779.9 ORF18662 - 0.26 11.5 5.9 0.44 10.8 1.1 3.1 2 1 1 3 3 3 0 Haemolysin XhlA adh_short PF00106.25 ORF18662 - 0.27 10.7 4.9 0.18 11.2 0.6 2.1 1 1 1 2 2 2 0 short chain dehydrogenase NPV_P10 PF05531.12 ORF18662 - 3.2 8.3 7.8 2.7 8.5 0.8 2.5 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Ion_trans_2 PF07885.16 ORF17922 - 4.7e-14 52.1 1.7 8.3e-14 51.3 1.7 1.3 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF17922 - 1.2e-10 41.1 0.4 2.1e-10 40.3 0.4 1.4 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 ORF17922 - 0.007 16.2 0.7 0.0079 16.0 0.7 1.4 1 1 0 1 1 1 1 Ligand-gated ion channel NKAIN PF05640.14 ORF17922 - 0.056 12.7 0.2 0.072 12.3 0.2 1.2 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein DUF2175 PF09943.9 ORF17922 - 0.28 11.5 2.2 0.82 10.0 0.3 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) DUF4446 PF14584.6 ORF17922 - 0.94 9.5 6.9 1.9 8.5 1.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Nuc_sug_transp PF04142.15 ORF17561 - 2.9e-10 39.8 4.1 3.3e-10 39.6 4.1 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter UAA PF08449.11 ORF17561 - 0.0002 20.7 1.6 0.00035 19.9 0.2 1.8 2 0 0 2 2 2 1 UAA transporter family DUF4131 PF13567.6 ORF17561 - 0.43 10.2 4.4 1.7 8.2 0.5 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) CPP1-like PF11833.8 ORF17561 - 0.73 9.5 6.4 0.13 11.9 2.1 1.8 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like EamA PF00892.20 ORF17561 - 1.1 9.4 10.0 0.29 11.3 1.8 2.8 2 1 1 3 3 3 0 EamA-like transporter family PARP PF00644.20 ORF15134 - 4.7e-21 75.3 0.7 7.8e-19 68.0 0.7 2.1 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Peptidase_M24 PF00557.24 ORF12992 - 1.5e-30 106.5 0.2 1.7e-30 106.3 0.2 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Tox-HNH-HHH PF15637.6 ORF111186 - 0.06 13.5 5.7 0.21 11.8 0.6 3.2 2 1 2 4 4 4 0 HNH/Endo VII superfamily nuclease toxin with a HHH motif Amidase PF01425.21 ORF111186 - 4 6.3 7.6 5.7 5.8 7.6 1.2 1 0 0 1 1 1 0 Amidase PIP5K PF01504.18 ORF110094 - 1.5e-35 122.7 4.4 1.7e-35 122.6 4.4 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Xan_ur_permease PF00860.20 ORF10987 - 4.2e-08 32.3 0.3 5.9e-08 31.8 0.3 1.1 1 0 0 1 1 1 1 Permease family Mob1_phocein PF03637.17 ORF107347 - 5.5e-35 120.9 0.3 7.4e-35 120.5 0.3 1.1 1 0 0 1 1 1 1 Mob1/phocein family Bacteroid_pep PF14406.6 ORF102308 - 0.023 15.0 0.5 0.023 15.0 0.5 2.8 3 0 0 3 3 3 0 Ribosomally synthesized peptide in Bacteroidetes Med9 PF07544.13 ORF102308 - 0.17 12.0 8.0 0.49 10.5 8.0 1.8 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 60KD_IMP PF02096.20 ORF102308 - 0.51 10.2 2.2 0.87 9.5 2.2 1.3 1 0 0 1 1 1 0 60Kd inner membrane protein PAP_central PF04928.17 ORF102308 - 1.1 8.2 4.8 2 7.3 4.8 1.4 1 0 0 1 1 1 0 Poly(A) polymerase central domain BNIP3 PF06553.12 NODE_32897_length_661_cov_103.785942_g26158_i0reverse_frame_1 - 0.064 12.9 0.4 0.088 12.5 0.4 1.2 1 0 0 1 1 1 0 BNIP3 Homeobox_KN PF05920.11 NODE_32886_length_661_cov_176.361022_g22381_i1reverse_frame_1 - 1.4e-11 44.1 0.3 3.4e-11 42.9 0.3 1.7 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_32886_length_661_cov_176.361022_g22381_i1reverse_frame_1 - 2.5e-07 30.4 0.5 2.5e-07 30.4 0.5 2.3 2 0 0 2 2 2 1 Homeodomain Homez PF11569.8 NODE_32886_length_661_cov_176.361022_g22381_i1reverse_frame_1 - 0.00036 19.9 0.0 0.00068 19.0 0.0 1.4 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez DUF1985 PF09331.11 NODE_32886_length_661_cov_176.361022_g22381_i1reverse_frame_1 - 0.019 15.0 2.2 0.15 12.1 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1985) MurJ PF03023.14 NODE_32861_length_662_cov_2.267943_g26128_i0reverse_frame_1 - 4.6e-79 266.1 9.8 5.1e-79 266.0 9.8 1.0 1 0 0 1 1 1 1 Lipid II flippase MurJ DUF1908 PF08926.11 NODE_32854_length_662_cov_47.269537_g26121_i0forward_frame_1 - 0.22 10.6 3.2 1.3 8.0 0.7 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF1908) DUF1218 PF06749.12 NODE_32848_length_662_cov_92.570973_g26115_i0reverse_frame_1 - 0.44 11.1 3.8 0.21 12.1 0.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1218) Sep15_SelM PF08806.11 NODE_32818_length_662_cov_1893.963317_g26088_i0reverse_frame_1 - 8.2e-18 64.3 0.3 1.7e-17 63.3 0.0 1.6 2 0 0 2 2 2 1 Sep15/SelM redox domain Carb_anhydrase PF00194.21 NODE_32815_length_662_cov_2951.355662_g26086_i0forward_frame_1 - 5.6e-29 101.4 1.0 7.6e-29 101.0 1.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Arm-DNA-bind_3 PF13356.6 NODE_32803_length_663_cov_3.447452_g26076_i0reverse_frame_1 - 0.0003 21.1 0.2 0.00062 20.1 0.2 1.6 1 0 0 1 1 1 1 Arm DNA-binding domain Phage_integrase PF00589.22 NODE_32803_length_663_cov_3.447452_g26076_i0reverse_frame_1 - 0.086 12.6 0.0 0.21 11.4 0.0 1.6 2 0 0 2 2 2 0 Phage integrase family DSPc PF00782.20 NODE_32775_length_663_cov_217.156051_g26049_i0reverse_frame_1 - 9e-27 93.5 0.2 1.8e-26 92.5 0.0 1.6 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_32775_length_663_cov_217.156051_g26049_i0reverse_frame_1 - 0.025 14.1 0.0 0.034 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Bac_luciferase PF00296.20 NODE_32761_length_664_cov_2.553259_g26038_i0reverse_frame_3 - 4e-43 148.0 0.1 4.9e-43 147.7 0.1 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase DUF1158 PF06643.11 NODE_32759_length_664_cov_3.119237_g26036_i0reverse_frame_3 - 0.067 13.7 0.3 0.067 13.7 0.3 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF1158) Cytochrom_C_asm PF01578.20 NODE_32755_length_664_cov_4.667727_g26032_i0reverse_frame_2 - 3.2e-56 190.5 19.2 4e-56 190.2 19.2 1.0 1 0 0 1 1 1 1 Cytochrome C assembly protein Dr_adhesin PF12393.8 NODE_32755_length_664_cov_4.667727_g26032_i0reverse_frame_2 - 0.14 12.5 0.4 0.63 10.4 0.4 2.2 1 0 0 1 1 1 0 Dr family adhesin DUF3094 PF11293.8 NODE_32755_length_664_cov_4.667727_g26032_i0reverse_frame_2 - 4.9 7.0 12.5 4.2 7.1 0.1 4.2 3 1 1 4 4 4 0 Protein of unknown function (DUF3094) YARHG PF13308.6 NODE_32750_length_664_cov_54.545310_g26027_i0forward_frame_3 - 0.029 14.3 0.0 0.044 13.7 0.0 1.3 1 0 0 1 1 1 0 YARHG domain DUF3144 PF11342.8 NODE_32750_length_664_cov_54.545310_g26027_i0forward_frame_3 - 0.085 13.2 0.1 0.17 12.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3144) Corazonin PF17308.2 NODE_32742_length_664_cov_91.179650_g26019_i0forward_frame_3 - 0.21 11.9 0.0 0.38 11.1 0.0 1.4 1 0 0 1 1 1 0 Pro-corazonin Ribosomal_S20p PF01649.18 NODE_32735_length_664_cov_118.643879_g26012_i0reverse_frame_3 - 0.02 15.5 2.2 0.02 15.5 2.2 2.3 2 0 0 2 2 2 0 Ribosomal protein S20 MbeB_N PF04837.12 NODE_32735_length_664_cov_118.643879_g26012_i0reverse_frame_3 - 0.049 13.9 1.0 0.17 12.2 0.1 2.1 2 0 0 2 2 2 0 MbeB-like, N-term conserved region DUF3112 PF11309.8 NODE_32735_length_664_cov_118.643879_g26012_i0reverse_frame_3 - 0.079 12.4 0.2 0.079 12.4 0.2 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3112) DUF1195 PF06708.11 NODE_32735_length_664_cov_118.643879_g26012_i0reverse_frame_3 - 0.13 12.1 1.4 0.47 10.2 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1195) MSC PF09402.10 NODE_32735_length_664_cov_118.643879_g26012_i0reverse_frame_3 - 0.5 9.8 10.5 0.099 12.1 4.6 1.9 1 1 1 2 2 2 0 Man1-Src1p-C-terminal domain DUF1211 PF06736.11 NODE_32728_length_664_cov_180.798092_g26005_i0forward_frame_2 - 0.0091 16.4 0.1 0.015 15.7 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1211) TIG_plexin PF17960.1 NODE_32725_length_664_cov_200.721781_g26002_i0reverse_frame_2 - 0.62 10.1 4.2 4 7.5 0.3 2.9 3 1 0 3 3 3 0 TIG domain Sulfotransfer_2 PF03567.14 NODE_32724_length_664_cov_204.974563_g26001_i0reverse_frame_3 - 1.7e-10 41.3 0.3 2e-05 24.7 0.1 2.1 2 0 0 2 2 2 2 Sulfotransferase family DUF5100 PF17029.5 NODE_32716_length_664_cov_456.736246_g25994_i0reverse_frame_2 - 0.05 13.5 0.1 2.3 8.1 0.0 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5100) Tubulin PF00091.25 NODE_32711_length_664_cov_1606.820350_g25989_i0forward_frame_3 - 5.1e-64 216.1 0.0 5.7e-64 216.0 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 NODE_32711_length_664_cov_1606.820350_g25989_i0forward_frame_3 - 0.00076 19.8 0.0 0.0012 19.1 0.0 1.3 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 NODE_32711_length_664_cov_1606.820350_g25989_i0forward_frame_3 - 0.012 15.3 0.0 0.02 14.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 NODE_32711_length_664_cov_1606.820350_g25989_i0forward_frame_3 - 0.056 12.6 0.0 0.073 12.2 0.0 1.1 1 0 0 1 1 1 0 Tubulin like Tubulin PF00091.25 NODE_32710_length_664_cov_1634.015898_g25988_i0reverse_frame_3 - 5.1e-64 216.1 0.0 5.7e-64 216.0 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 NODE_32710_length_664_cov_1634.015898_g25988_i0reverse_frame_3 - 0.00076 19.8 0.0 0.0012 19.1 0.0 1.3 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 NODE_32710_length_664_cov_1634.015898_g25988_i0reverse_frame_3 - 0.012 15.3 0.0 0.02 14.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 NODE_32710_length_664_cov_1634.015898_g25988_i0reverse_frame_3 - 0.056 12.6 0.0 0.073 12.2 0.0 1.1 1 0 0 1 1 1 0 Tubulin like Pkinase PF00069.25 NODE_32709_length_664_cov_4242.182830_g19647_i3reverse_frame_3 - 1.6e-37 129.3 0.2 2e-37 129.0 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_32709_length_664_cov_4242.182830_g19647_i3reverse_frame_3 - 4.9e-26 91.6 0.1 6.1e-26 91.2 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_32709_length_664_cov_4242.182830_g19647_i3reverse_frame_3 - 0.0018 17.3 1.4 0.0021 17.0 1.4 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 NODE_32709_length_664_cov_4242.182830_g19647_i3reverse_frame_3 - 0.0081 15.5 0.1 0.014 14.7 0.1 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_32709_length_664_cov_4242.182830_g19647_i3reverse_frame_3 - 0.017 14.4 0.0 0.025 13.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like DnaJ PF00226.31 NODE_32706_length_665_cov_2.380952_g25985_i0reverse_frame_3 - 1e-05 25.5 0.0 1.8e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain ABC-3 PF00950.17 NODE_32705_length_665_cov_3.026984_g25984_i0forward_frame_3 - 3.2e-53 180.9 9.1 3.7e-53 180.7 9.1 1.0 1 0 0 1 1 1 1 ABC 3 transport family Sarcoglycan_2 PF05510.13 NODE_32704_length_665_cov_3.953968_g25983_i0reverse_frame_2 - 0.15 10.8 0.1 0.21 10.3 0.1 1.3 1 0 0 1 1 1 0 Sarcoglycan alpha/epsilon MFS_2 PF13347.6 NODE_32704_length_665_cov_3.953968_g25983_i0forward_frame_2 - 6.7e-36 123.8 11.6 7.4e-36 123.6 11.6 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF983 PF06170.12 NODE_32704_length_665_cov_3.953968_g25983_i0forward_frame_2 - 0.69 10.4 8.2 0.38 11.2 1.7 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF983) DUF4282 PF14110.6 NODE_32704_length_665_cov_3.953968_g25983_i0forward_frame_2 - 2.7 8.8 9.6 3.2e+02 2.1 9.6 3.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4282) Fe_bilin_red PF05996.12 NODE_32700_length_665_cov_61.065079_g25979_i0forward_frame_3 - 8.1 6.0 10.6 0.24 11.0 2.9 2.1 2 0 0 2 2 2 0 Ferredoxin-dependent bilin reductase Saf_2TM PF18303.1 NODE_32644_length_666_cov_245.309033_g25932_i0forward_frame_2 - 0.13 11.9 0.3 0.21 11.1 0.3 1.3 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain Ribul_P_3_epim PF00834.19 ORF98850 - 1.8e-84 282.1 0.1 2.1e-84 281.9 0.1 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family BKACE PF05853.12 ORF98850 - 0.00016 21.1 0.0 0.00024 20.5 0.0 1.3 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme PEP_mutase PF13714.6 ORF98850 - 0.0011 18.4 0.0 0.25 10.8 0.0 2.5 1 1 0 2 2 2 2 Phosphoenolpyruvate phosphomutase PcrB PF01884.17 ORF98850 - 0.002 17.6 0.5 0.21 11.0 0.0 2.1 1 1 1 2 2 2 2 PcrB family NanE PF04131.14 ORF98850 - 0.0028 16.9 0.4 0.02 14.1 0.4 2.1 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.21 ORF98850 - 0.022 13.9 0.0 1.1 8.3 0.0 2.1 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.19 ORF98850 - 0.038 13.8 0.1 4.1 7.1 0.0 2.8 2 1 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain Sp38 PF07354.12 ORF98850 - 0.048 13.1 0.0 0.071 12.5 0.0 1.3 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) His_biosynth PF00977.21 ORF98850 - 0.056 12.9 0.1 0.16 11.4 0.0 1.8 2 0 0 2 2 2 0 Histidine biosynthesis protein OMPdecase PF00215.24 ORF98850 - 0.057 13.0 0.6 0.12 12.0 0.6 1.9 1 1 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family PEP_hydrolase PF09370.10 ORF98850 - 0.089 12.0 0.1 0.44 9.7 0.0 2.2 2 1 0 2 2 2 0 Phosphoenolpyruvate hydrolase-like Radical_SAM PF04055.21 ORF98850 - 0.1 13.0 0.0 2.8 8.3 0.0 2.4 1 1 1 2 2 2 0 Radical SAM superfamily FAM180 PF15173.6 ORF96972 - 0.011 15.7 0.1 1.4 8.9 0.0 2.2 2 0 0 2 2 2 0 FAM180 family HAD_2 PF13419.6 ORF93657 - 3.7e-21 76.0 0.0 4.3e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF93657 - 9.1e-10 39.2 0.1 7.3e-09 36.2 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF93657 - 0.0088 16.1 0.2 5 7.3 0.1 2.7 2 1 1 3 3 3 2 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF93657 - 0.14 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 HAD-hyrolase-like NUDIX PF00293.28 ORF92343 - 1e-10 41.8 0.1 1.6e-10 41.1 0.1 1.3 1 0 0 1 1 1 1 NUDIX domain GST_N PF02798.20 ORF90749 - 0.0043 17.4 0.0 0.0071 16.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF90749 - 0.055 13.7 0.0 0.51 10.6 0.0 2.1 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain FKBP_C PF00254.28 ORF90730 - 2.9e-29 101.2 0.2 5.7e-29 100.3 0.2 1.5 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase MIT PF04212.18 ORF90730 - 0.01 15.9 0.6 0.28 11.3 0.1 2.2 1 1 1 2 2 2 0 MIT (microtubule interacting and transport) domain TPR_1 PF00515.28 ORF90730 - 0.017 14.9 0.0 1.6 8.7 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF90730 - 0.038 14.3 0.0 0.22 11.8 0.0 1.9 1 1 0 1 1 1 0 Tetratricopeptide repeat DUF4834 PF16118.5 ORF90565 - 0.038 15.0 1.9 0.38 11.8 0.9 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) Ribosomal_L7Ae PF01248.26 ORF82941 - 2.6e-21 75.2 0.2 4.8e-21 74.3 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNase_P_pop3 PF08228.11 ORF82941 - 0.0071 16.4 0.1 0.0099 15.9 0.1 1.3 1 0 0 1 1 1 1 RNase P subunit Pop3 Fer4_11 PF13247.6 ORF82941 - 0.1 12.8 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF334 PF03904.13 ORF82941 - 4.2 6.8 6.7 3.7 7.0 1.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF334) Spc7 PF08317.11 ORF82286 - 0.055 12.3 15.7 0.016 14.1 13.0 1.5 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF4407 PF14362.6 ORF82286 - 0.65 9.3 3.9 0.79 9.0 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF82286 - 0.72 10.5 9.1 0.6 10.8 3.9 2.6 2 1 0 2 2 2 0 SlyX Atg14 PF10186.9 ORF82286 - 3.7 6.5 11.8 4.8 6.2 11.8 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1664 PF07889.12 ORF82286 - 4.6 7.3 8.7 3.4 7.7 6.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) FapA PF03961.13 ORF82286 - 6 5.4 13.8 7.6 5.0 13.2 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A NAD_binding_5 PF07994.12 ORF82286 - 10 5.4 7.7 4.5 6.6 5.6 1.5 2 0 0 2 2 2 0 Myo-inositol-1-phosphate synthase BBS2_Mid PF14783.6 ORF81294 - 1.9e-05 24.7 0.1 3.6e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 Ciliary BBSome complex subunit 2, middle region WD40 PF00400.32 ORF81294 - 0.011 16.6 0.1 0.078 13.9 0.0 2.5 3 1 0 3 3 3 0 WD domain, G-beta repeat Nup160 PF11715.8 ORF81294 - 0.028 13.1 0.0 0.035 12.7 0.0 1.3 1 0 0 1 1 1 0 Nucleoporin Nup120/160 eIF-5_eIF-2B PF01873.17 ORF74811 - 1.4e-31 108.8 1.3 2.5e-31 108.0 1.3 1.4 1 0 0 1 1 1 1 Domain found in IF2B/IF5 zinc_ribbon_6 PF14599.6 ORF74811 - 0.011 15.7 2.3 0.14 12.2 0.6 2.5 2 0 0 2 2 2 0 Zinc-ribbon TF_Zn_Ribbon PF08271.12 ORF74811 - 0.012 15.1 0.2 0.03 13.8 0.2 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding Elf1 PF05129.13 ORF74811 - 0.019 15.0 2.3 0.019 15.0 2.3 2.3 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like PIN_2 PF10130.9 ORF74811 - 0.12 12.7 0.2 1.1 9.5 0.1 2.1 2 0 0 2 2 2 0 PIN domain Zn-ribbon_8 PF09723.10 ORF74811 - 0.18 12.0 2.2 2.1 8.5 0.0 2.4 1 1 0 1 1 1 0 Zinc ribbon domain Rubredoxin_2 PF18073.1 ORF74811 - 0.2 11.4 2.0 3.5 7.5 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain CxC4 PF18717.1 ORF74811 - 0.26 11.1 3.3 1.1 9.1 2.6 2.2 2 1 1 3 3 3 0 CxC4 like cysteine cluster associated with KDZ transposases DUF2499 PF10693.9 ORF74309 - 4.6e-31 106.9 4.5 7.8e-31 106.2 4.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2499) DUF3413 PF11893.8 ORF74309 - 0.69 9.0 4.6 1.2 8.3 4.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) LUC7 PF03194.15 ORF74194 - 1.9e-09 37.6 9.7 1.9e-09 37.6 9.7 2.1 1 1 1 2 2 2 1 LUC7 N_terminus zf-met PF12874.7 ORF74194 - 0.009 16.4 1.7 2.7 8.5 0.1 2.5 2 0 0 2 2 2 2 Zinc-finger of C2H2 type Porin_3 PF01459.22 ORF7156 - 1.4e-10 41.1 0.3 2.3e-10 40.4 0.3 1.3 1 1 0 1 1 1 1 Eukaryotic porin Endotoxin_C PF03944.14 ORF7156 - 0.16 12.3 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 delta endotoxin zf-RING_2 PF13639.6 ORF70845 - 4.3e-14 52.6 13.1 7.2e-14 51.8 13.1 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF70845 - 1.8e-10 40.4 5.9 1.8e-10 40.4 5.9 2.3 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF70845 - 2.1e-07 30.8 4.9 2.1e-07 30.8 4.9 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF70845 - 2.5e-07 30.4 12.2 4.8e-07 29.5 12.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF70845 - 1.1e-06 28.5 11.6 1.9e-06 27.7 10.6 1.9 2 0 0 2 2 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF70845 - 1.8e-06 28.2 12.6 8.7e-06 25.9 12.6 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF70845 - 8e-06 25.6 9.7 1.3e-05 24.9 9.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF70845 - 8e-06 25.6 11.6 1.4e-05 24.9 11.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF70845 - 0.00027 20.7 9.7 0.00054 19.8 9.7 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF70845 - 0.0075 16.3 4.5 0.014 15.4 4.5 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF70845 - 0.05 13.2 9.8 0.11 12.1 9.8 1.7 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF70845 - 0.066 13.4 10.4 0.62 10.3 10.4 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain zf-Nse PF11789.8 ORF70845 - 0.11 12.3 7.6 0.23 11.3 7.2 1.7 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit zf-RING-like PF08746.11 ORF70845 - 0.13 12.6 10.4 0.22 11.9 10.4 1.4 1 0 0 1 1 1 0 RING-like domain zf-C3HC4_4 PF15227.6 ORF70845 - 2.1 8.5 11.6 16 5.7 11.8 2.4 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-HC5HC2H PF13771.6 ORF70845 - 4.8 7.5 8.9 0.33 11.2 2.9 2.0 2 1 1 3 3 3 0 PHD-like zinc-binding domain Zn-ribbon_8 PF09723.10 ORF70845 - 6.5 7.0 8.8 2.1 8.5 4.5 2.2 2 0 0 2 2 2 0 Zinc ribbon domain RINGv PF12906.7 ORF70845 - 8.3 6.6 11.6 23 5.2 11.5 1.8 1 1 0 1 1 1 0 RING-variant domain BTB PF00651.31 ORF69228 - 0.0016 18.6 0.0 0.0031 17.7 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain Aminotran_1_2 PF00155.21 ORF69228 - 0.0053 16.0 0.0 0.39 9.8 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class I and II BLOC1_2 PF10046.9 ORF67982 - 0.0012 19.1 3.1 0.0012 19.1 3.1 3.5 2 1 1 3 3 3 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 HrpB7 PF09486.10 ORF67982 - 0.013 15.9 1.2 0.088 13.2 0.0 2.3 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) CSN5_C PF18323.1 ORF67982 - 3.1 8.8 9.1 0.25 12.3 2.8 2.5 2 1 1 3 3 3 0 Cop9 signalosome subunit 5 C-terminal domain TolA_bind_tri PF16331.5 ORF67982 - 4.9 7.3 22.1 4.9 7.3 6.3 4.5 2 2 2 4 4 4 0 TolA binding protein trimerisation ATG16 PF08614.11 ORF67982 - 5.1 7.3 22.8 2.1 8.5 5.2 3.1 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Spc7 PF08317.11 ORF67982 - 8.7 5.1 25.6 0.23 10.3 9.8 2.3 1 1 1 2 2 2 0 Spc7 kinetochore protein Anoctamin PF04547.12 ORF6693 - 3.5e-09 36.0 7.2 3.5e-08 32.7 7.2 1.9 1 1 0 1 1 1 1 Calcium-activated chloride channel RSN1_7TM PF02714.15 ORF6693 - 1.9e-05 24.2 12.4 0.0038 16.6 2.7 2.3 2 1 0 2 2 2 2 Calcium-dependent channel, 7TM region, putative phosphate SLC3A2_N PF16028.5 ORF6693 - 0.1 12.2 1.3 3.7 7.2 0.3 2.6 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus TMC PF07810.13 ORF6693 - 0.95 10.1 6.8 0.22 12.1 0.9 2.7 2 2 1 3 3 3 0 TMC domain DUF456 PF04306.13 ORF6693 - 1 9.7 7.5 0.05 13.9 1.7 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF456) DUF4083 PF13314.6 ORF6693 - 2.5 8.1 6.1 11 6.0 0.9 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) DUSP PF06337.12 ORF66085 - 2.9e-16 59.9 0.0 4e-16 59.4 0.0 1.2 1 0 0 1 1 1 1 DUSP domain MORN PF02493.20 ORF66085 - 1.7e-11 43.3 11.3 3.8e-05 23.3 0.0 5.2 5 0 0 5 5 5 4 MORN repeat Qn_am_d_aII PF14930.6 ORF66085 - 0.037 14.3 0.1 2.6 8.4 0.0 2.4 1 1 1 2 2 2 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain II TAF6_C PF07571.13 ORF64524 - 0.15 12.4 0.1 1.2 9.6 0.0 2.1 2 0 0 2 2 2 0 TAF6 C-terminal HEAT repeat domain SDH_C PF18317.1 ORF63857 - 7.4e-12 44.8 0.9 1.5e-11 43.8 0.9 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_dh_N PF08501.11 ORF63857 - 3.1e-05 24.1 0.1 7.9e-05 22.8 0.1 1.7 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 ORF63857 - 0.0027 17.8 0.1 0.0041 17.2 0.1 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Methyltransf_16 PF10294.9 ORF63857 - 0.064 13.0 0.1 0.099 12.4 0.1 1.3 1 0 0 1 1 1 0 Lysine methyltransferase RE_Bsp6I PF09504.10 ORF63857 - 0.13 11.8 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Bsp6I restriction endonuclease CTP_transf_1 PF01148.20 ORF61154 - 1.4e-57 195.5 5.7 1.7e-57 195.3 5.7 1.1 1 0 0 1 1 1 1 Cytidylyltransferase family CSD PF00313.22 ORF60812 - 0.04 13.8 0.1 0.16 11.8 0.1 2.0 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain DUF4974 PF16344.5 ORF60406 - 0.047 13.7 0.4 0.12 12.4 0.4 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4974) Peptidase_M16 PF00675.20 ORF59992 - 0.0028 17.7 0.0 0.004 17.2 0.0 1.2 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Ammonium_transp PF00909.21 ORF57789 - 1.2e-38 132.8 7.1 1.5e-38 132.6 7.1 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Rieske PF00355.26 ORF57638 - 1.8e-12 47.1 0.0 3.3e-12 46.2 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF57638 - 3.2e-07 30.2 0.0 4.6e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain zf-A20 PF01754.16 ORF57638 - 0.17 11.8 0.1 0.3 11.1 0.1 1.3 1 0 0 1 1 1 0 A20-like zinc finger 2OG-FeII_Oxy_2 PF13532.6 ORF5680 - 1.7e-21 77.3 0.0 2.1e-21 77.0 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily IPP-2 PF04979.14 ORF5303 - 0.0033 18.2 1.5 0.0033 18.2 1.5 2.2 2 0 0 2 2 2 1 Protein phosphatase inhibitor 2 (IPP-2) TetR_C_17 PF17922.1 ORF52950 - 0.075 13.1 3.7 0.36 10.9 0.6 2.6 2 2 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Rho_N PF07498.12 ORF52950 - 0.47 10.4 0.1 0.47 10.4 0.1 3.0 4 0 0 4 4 4 0 Rho termination factor, N-terminal domain GrpE PF01025.19 ORF52950 - 0.61 9.7 6.7 1.5 8.5 0.2 2.7 1 1 1 3 3 3 0 GrpE Response_reg PF00072.24 ORF52659 - 1e-20 74.0 0.1 1.9e-20 73.1 0.1 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Spore-coat_CotD PF11122.8 ORF52659 - 0.033 15.0 0.2 0.06 14.2 0.2 1.4 1 0 0 1 1 1 0 Inner spore coat protein D EF-hand_6 PF13405.6 ORF52258 - 0.001 18.8 0.0 0.37 10.8 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF52258 - 0.012 16.0 0.6 0.43 11.1 0.1 2.4 2 1 1 3 3 3 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF52258 - 0.072 12.7 0.1 0.72 9.5 0.0 2.6 3 0 0 3 3 3 0 EF hand DUF2206 PF09971.9 ORF52258 - 0.11 11.3 0.3 0.15 10.8 0.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) DUF3223 PF11523.8 ORF50741 - 0.012 16.4 1.2 0.048 14.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3223) DUF1149 PF06619.11 ORF50741 - 0.021 15.1 2.3 0.021 15.1 2.3 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF1149) HAUS-augmin3 PF14932.6 ORF49398 - 0.0043 16.7 25.8 0.0043 16.7 11.5 2.0 1 1 1 2 2 2 2 HAUS augmin-like complex subunit 3 SlyX PF04102.12 ORF49398 - 0.021 15.4 8.0 0.021 15.4 8.0 3.0 1 1 2 3 3 3 0 SlyX PRKG1_interact PF15898.5 ORF49398 - 0.041 14.8 20.8 0.1 13.5 10.6 2.9 1 1 2 3 3 3 0 cGMP-dependent protein kinase interacting domain PKcGMP_CC PF16808.5 ORF49398 - 0.091 12.6 13.0 0.76 9.7 0.0 4.1 3 1 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase IFT20 PF14931.6 ORF49398 - 0.26 11.5 18.4 2.3 8.4 9.7 2.4 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 Syntaxin_2 PF14523.6 ORF49398 - 0.32 11.4 14.7 0.4 11.1 7.2 2.9 1 1 2 3 3 3 0 Syntaxin-like protein TolA_bind_tri PF16331.5 ORF49398 - 0.33 11.0 21.9 1.3 9.2 12.1 2.5 2 1 0 2 2 2 0 TolA binding protein trimerisation DUF5403 PF17395.2 ORF49398 - 0.53 10.6 4.5 1.5 9.1 1.4 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5403) DUF547 PF04784.14 ORF49398 - 0.6 10.2 2.9 10 6.2 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function, DUF547 UPF0242 PF06785.11 ORF49398 - 1 9.4 28.4 0.73 9.9 22.8 2.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus UPF0184 PF03670.13 ORF49398 - 1.2 9.5 7.0 1 9.8 3.1 2.4 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) Spc7 PF08317.11 ORF49398 - 1.6 7.6 27.2 1.1 8.0 19.9 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein TTKRSYEDQ PF10212.9 ORF49398 - 1.6 7.6 14.5 0.14 11.1 9.1 1.7 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein DUF641 PF04859.12 ORF49398 - 1.7 9.0 17.7 3.6 7.9 2.6 2.7 1 1 0 2 2 2 0 Plant protein of unknown function (DUF641) Mif2_N PF15624.6 ORF49398 - 1.9 9.2 7.9 6.8 7.4 3.9 2.1 1 1 1 2 2 2 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal KxDL PF10241.9 ORF49398 - 2.3 8.6 13.3 8.3 6.8 1.3 2.7 1 1 0 2 2 2 0 Uncharacterized conserved protein V_ATPase_I PF01496.19 ORF49398 - 2.6 5.8 11.6 3.2 5.6 11.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MAD PF05557.13 ORF49398 - 2.8 6.2 23.6 0.21 9.9 3.9 2.0 1 1 1 2 2 2 0 Mitotic checkpoint protein YlqD PF11068.8 ORF49398 - 2.9 8.3 27.4 5.4 7.4 17.8 2.3 1 1 1 2 2 2 0 YlqD protein DUF1664 PF07889.12 ORF49398 - 3.8 7.6 11.9 0.44 10.6 2.6 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Rotamase PF00639.21 ORF49398 - 7.2 7.6 15.6 3.9 8.5 2.4 2.4 1 1 0 2 2 2 0 PPIC-type PPIASE domain FtsK_SpoIIIE PF01580.18 ORF46033 - 0.025 13.9 0.0 0.054 12.8 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family DUF5499 PF17603.2 ORF43617 - 0.046 14.3 1.9 0.064 13.9 1.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5499) RNA_pol_Rpa2_4 PF06883.12 ORF41822 - 0.023 14.7 0.0 0.17 11.9 0.0 2.2 2 0 0 2 2 2 0 RNA polymerase I, Rpa2 specific domain DnaJ PF00226.31 ORF41539 - 2.5e-16 59.5 1.8 6.2e-16 58.3 1.8 1.7 1 0 0 1 1 1 1 DnaJ domain dCache_1 PF02743.18 ORF41539 - 0.14 11.9 3.2 0.052 13.3 0.7 1.5 2 0 0 2 2 2 0 Cache domain U62_UL91 PF17442.2 ORF37752 - 4.1 7.5 5.3 0.48 10.4 0.3 2.0 3 0 0 3 3 3 0 Functional domain of U62 and UL91 proteins MORN PF02493.20 ORF35811 - 2.8e-49 162.1 66.9 1.7e-08 33.9 1.9 9.9 10 0 0 10 10 10 9 MORN repeat DUF523 PF04463.12 ORF35811 - 0.81 9.7 2.5 38 4.3 0.0 3.8 2 2 2 4 4 4 0 Protein of unknown function (DUF523) DEADboxA PF12343.8 ORF35811 - 4.1 8.0 12.7 1.6 9.4 3.0 3.7 1 1 1 2 2 2 0 Cold shock protein DEAD box A DUF3921 PF13060.6 ORF35684 - 0.034 14.2 0.2 0.064 13.3 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3921) Acetyltransf_1 PF00583.25 ORF35508 - 7.4e-05 23.0 0.0 0.00012 22.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF35508 - 0.00015 21.7 0.0 0.00024 21.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain CTP_transf_like PF01467.26 ORF35309 - 3.3e-19 69.5 0.0 4.5e-19 69.1 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase-like WD40_4 PF16300.5 ORF35309 - 0.015 15.2 0.1 0.035 14.0 0.1 1.6 1 0 0 1 1 1 0 Type of WD40 repeat SWIB PF02201.18 ORF35309 - 0.17 11.8 0.2 23 4.9 0.0 3.0 3 0 0 3 3 3 0 SWIB/MDM2 domain Otopetrin PF03189.13 ORF35139 - 0.023 13.5 0.0 0.025 13.4 0.0 1.2 1 0 0 1 1 1 0 Otopetrin GET2 PF08690.10 ORF35139 - 0.029 14.0 0.1 0.27 10.9 0.0 1.9 2 0 0 2 2 2 0 GET complex subunit GET2 DUF2207 PF09972.9 ORF35139 - 0.077 11.8 0.2 0.12 11.1 0.2 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) SurA_N_3 PF13624.6 ORF35139 - 0.18 11.6 0.2 0.18 11.6 0.2 2.3 3 0 0 3 3 3 0 SurA N-terminal domain SNARE PF05739.19 ORF35139 - 5.6 7.0 7.0 0.59 10.2 0.2 2.6 3 0 0 3 3 3 0 SNARE domain DUF1048 PF06304.11 ORF34301 - 0.065 13.7 2.3 0.32 11.5 0.0 2.7 2 2 1 3 3 3 0 Protein of unknown function (DUF1048) DLH PF01738.18 ORF3363 - 1.1e-25 90.5 0.0 1.3e-25 90.2 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 ORF3363 - 0.001 19.0 0.1 0.089 12.7 0.0 2.2 2 0 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 ORF3363 - 0.0028 17.1 0.3 0.0045 16.5 0.3 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF1100 PF06500.11 ORF3363 - 0.012 14.5 0.0 0.019 13.8 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) Anoctamin PF04547.12 ORF32381 - 4.9e-22 78.4 0.7 6.1e-22 78.1 0.7 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel zf-LITAF-like PF10601.9 ORF32381 - 0.71 10.2 3.7 2 8.8 0.2 2.3 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain BBS2_Mid PF14783.6 ORF31033 - 1.9e-05 24.7 0.1 3.6e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 Ciliary BBSome complex subunit 2, middle region WD40 PF00400.32 ORF31033 - 0.011 16.6 0.1 0.078 13.9 0.0 2.5 3 1 0 3 3 3 0 WD domain, G-beta repeat Nup160 PF11715.8 ORF31033 - 0.028 13.1 0.0 0.035 12.7 0.0 1.3 1 0 0 1 1 1 0 Nucleoporin Nup120/160 BBS2_Mid PF14783.6 ORF30498 - 1.9e-05 24.7 0.1 3.6e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 Ciliary BBSome complex subunit 2, middle region WD40 PF00400.32 ORF30498 - 0.011 16.6 0.1 0.078 13.9 0.0 2.5 3 1 0 3 3 3 0 WD domain, G-beta repeat Nup160 PF11715.8 ORF30498 - 0.028 13.1 0.0 0.035 12.7 0.0 1.3 1 0 0 1 1 1 0 Nucleoporin Nup120/160 Fer4_11 PF13247.6 ORF29793 - 4e-25 87.8 7.7 5.3e-25 87.5 7.7 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Form-deh_trans PF09163.11 ORF29793 - 1.8e-21 75.6 0.2 1.8e-21 75.6 0.2 1.7 2 0 0 2 2 1 1 Formate dehydrogenase N, transmembrane Fer4_9 PF13187.6 ORF29793 - 1e-10 41.6 24.7 2.6e-06 27.5 8.4 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF29793 - 5.5e-10 39.2 29.8 7.9e-07 29.1 11.1 2.6 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF29793 - 1.4e-09 38.4 15.1 3.5e-05 24.3 10.1 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF29793 - 5e-06 26.6 7.5 5e-06 26.6 7.5 2.7 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF29793 - 8.7e-06 25.6 26.6 0.00028 20.8 2.6 3.9 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4 PF00037.27 ORF29793 - 9.8e-06 25.2 8.6 6.9e-05 22.5 2.7 4.6 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_2 PF12797.7 ORF29793 - 0.00015 21.6 18.7 0.013 15.5 1.1 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_3 PF12798.7 ORF29793 - 0.00021 22.0 26.8 0.32 12.0 3.7 3.4 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4_16 PF13484.6 ORF29793 - 0.00027 21.8 17.5 0.1 13.6 0.0 4.3 2 1 2 4 4 4 2 4Fe-4S double cluster binding domain Fer4_20 PF14691.6 ORF29793 - 0.004 16.9 12.0 0.011 15.5 0.4 3.2 2 1 1 3 3 3 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_4 PF12800.7 ORF29793 - 0.033 14.7 3.5 0.033 14.7 3.5 3.6 3 1 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 ORF29793 - 0.033 14.7 16.8 0.99 10.0 7.1 3.5 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF29793 - 0.045 14.6 0.7 0.045 14.6 0.7 2.9 3 0 0 3 3 3 0 4Fe-4S dicluster domain GF_recep_IV PF14843.6 ORF29793 - 0.28 11.0 10.0 0.65 9.8 10.0 1.6 1 1 0 1 1 1 0 Growth factor receptor domain IV Fer4_8 PF13183.6 ORF29793 - 0.48 10.9 18.1 0.95 10.0 5.5 3.5 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 ORF29793 - 1.4 9.1 16.1 0.066 13.4 4.0 3.1 1 1 2 3 3 3 0 4Fe-4S dicluster domain Amidase PF01425.21 ORF27526 - 5.4e-14 52.0 0.0 9.1e-14 51.3 0.0 1.4 1 1 0 1 1 1 1 Amidase DUF2303 PF10065.9 ORF27526 - 0.037 13.2 0.0 0.074 12.2 0.0 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) 2OG-FeII_Oxy_3 PF13640.6 ORF26633 - 0.00032 21.5 0.0 0.00063 20.6 0.0 1.6 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily NAPRTase_N PF17767.1 ORF25282 - 0.089 13.2 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ANAPC3 PF12895.7 ORF25282 - 0.092 13.0 0.6 0.18 12.0 0.6 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 MORN PF02493.20 ORF24546 - 2.5e-21 74.2 37.5 2.3e-06 27.2 1.0 7.0 8 1 0 8 8 8 5 MORN repeat PATR PF12951.7 ORF24546 - 0.051 13.7 4.6 0.13 12.4 1.9 2.9 2 0 0 2 2 2 0 Passenger-associated-transport-repeat SM-ATX PF14438.6 ORF24546 - 0.93 9.7 2.7 41 4.4 0.0 3.3 3 1 2 5 5 5 0 Ataxin 2 SM domain Rtt106 PF08512.12 ORF24039 - 0.053 13.9 0.2 0.15 12.5 0.1 1.8 2 0 0 2 2 2 0 Histone chaperone Rttp106-like TPT PF03151.16 ORF23833 - 5.1e-07 29.3 6.3 5.9e-07 29.1 6.3 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF23833 - 0.00022 21.4 16.4 0.00039 20.6 13.4 2.0 1 1 1 2 2 2 2 EamA-like transporter family DUF2070 PF09843.9 ORF23833 - 0.088 11.1 9.1 0.11 10.7 9.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Ank_2 PF12796.7 ORF20761 - 8.3e-12 45.5 0.1 3.3e-07 30.8 0.0 2.5 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF20761 - 5.7e-09 36.4 0.4 0.0021 18.6 0.1 3.8 2 2 1 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF20761 - 1.4e-08 34.3 1.2 1 10.1 0.0 4.8 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF20761 - 2.6e-06 27.6 1.0 0.51 10.7 0.0 4.1 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF20761 - 5.2e-05 23.5 5.1 0.15 12.6 0.3 4.5 4 0 0 4 4 4 1 Ankyrin repeat ZnuA PF01297.17 ORF20487 - 0.16 11.3 2.6 0.2 11.0 2.6 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic YabA PF06156.13 ORF20487 - 3 8.5 5.3 2.5 8.8 3.4 1.8 2 0 0 2 2 2 0 Initiation control protein YabA MIF4G_like_2 PF09090.11 ORF20487 - 6.8 6.1 8.4 14 5.1 8.3 1.6 1 1 0 1 1 1 0 MIF4G like FCD PF07729.12 ORF19166 - 1.8e-20 73.6 7.9 2.6e-20 73.1 7.9 1.2 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 ORF19166 - 8.6e-17 60.6 0.3 1.5e-16 59.8 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family LexA_DNA_bind PF01726.16 ORF19166 - 0.0011 18.7 0.0 0.0024 17.6 0.0 1.5 1 0 0 1 1 1 1 LexA DNA binding domain FadR_C PF07840.12 ORF19166 - 0.0043 17.0 0.1 0.0094 15.9 0.1 1.6 1 1 0 1 1 1 1 FadR C-terminal domain TrmB PF01978.19 ORF19166 - 0.0083 16.0 0.0 0.016 15.1 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 ORF19166 - 0.021 14.8 0.0 0.047 13.7 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 ORF19166 - 0.037 14.4 0.4 0.098 13.0 0.0 1.9 3 0 0 3 3 3 0 Transcriptional regulator Fe_dep_repress PF01325.19 ORF19166 - 0.11 12.7 0.0 0.29 11.3 0.0 1.7 1 1 1 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain 2OG-FeII_Oxy PF03171.20 ORF16579 - 0.013 16.0 0.1 0.26 11.8 0.0 2.1 2 0 0 2 2 2 0 2OG-Fe(II) oxygenase superfamily CS PF04969.16 ORF14663 - 3.8e-06 27.8 0.0 3.9e-05 24.6 0.0 2.1 1 1 0 1 1 1 1 CS domain Ldl_recept_b PF00058.17 ORF14663 - 0.0005 20.5 0.1 0.12 12.8 0.0 3.1 3 1 0 3 3 3 2 Low-density lipoprotein receptor repeat class B GST_C_3 PF14497.6 ORF13675 - 2.5e-10 40.4 0.2 9.2e-10 38.6 0.2 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF13675 - 2.8e-10 40.3 0.1 4.8e-10 39.5 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF13675 - 2.8e-08 34.0 0.0 4.8e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF13675 - 4.3e-07 30.2 0.0 9.1e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF13675 - 1.7e-05 25.0 0.0 3.7e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF13675 - 0.00085 19.3 0.0 0.0016 18.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Tom37 PF10568.9 ORF13675 - 0.002 18.4 0.0 0.0038 17.5 0.0 1.5 1 0 0 1 1 1 1 Outer mitochondrial membrane transport complex protein GST_N_4 PF17172.4 ORF13675 - 0.0058 17.3 0.0 0.012 16.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain Glutaredoxin PF00462.24 ORF13675 - 0.037 14.2 0.1 0.66 10.2 0.0 2.3 2 0 0 2 2 2 0 Glutaredoxin eIF-5_eIF-2B PF01873.17 ORF109637 - 1.4e-31 108.8 1.3 2.5e-31 108.0 1.3 1.4 1 0 0 1 1 1 1 Domain found in IF2B/IF5 zinc_ribbon_6 PF14599.6 ORF109637 - 0.011 15.7 2.3 0.14 12.2 0.6 2.5 2 0 0 2 2 2 0 Zinc-ribbon TF_Zn_Ribbon PF08271.12 ORF109637 - 0.012 15.1 0.2 0.03 13.8 0.2 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding Elf1 PF05129.13 ORF109637 - 0.019 15.0 2.3 0.019 15.0 2.3 2.3 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like PIN_2 PF10130.9 ORF109637 - 0.12 12.7 0.2 1.1 9.5 0.1 2.1 2 0 0 2 2 2 0 PIN domain Zn-ribbon_8 PF09723.10 ORF109637 - 0.18 12.0 2.2 2.1 8.5 0.0 2.4 1 1 0 1 1 1 0 Zinc ribbon domain Rubredoxin_2 PF18073.1 ORF109637 - 0.2 11.4 2.0 3.5 7.5 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain CxC4 PF18717.1 ORF109637 - 0.26 11.1 3.3 1.1 9.1 2.6 2.2 2 1 1 3 3 3 0 CxC4 like cysteine cluster associated with KDZ transposases Laminin_II PF06009.12 ORF101323 - 0.00062 19.8 7.3 0.00062 19.8 7.3 2.8 1 1 1 2 2 2 1 Laminin Domain II Leu_zip PF15294.6 ORF101323 - 0.013 15.0 32.5 0.017 14.7 14.7 2.2 1 1 1 2 2 2 0 Leucine zipper HALZ PF02183.18 ORF101323 - 0.023 14.9 24.4 0.11 12.8 5.8 4.7 4 0 0 4 4 4 0 Homeobox associated leucine zipper YabA PF06156.13 ORF101323 - 0.029 15.0 9.4 0.029 15.0 9.4 3.0 1 1 1 2 2 2 0 Initiation control protein YabA Laminin_I PF06008.14 ORF101323 - 0.046 13.4 27.8 0.071 12.8 27.3 1.5 1 1 0 1 1 1 0 Laminin Domain I CENP-F_leu_zip PF10473.9 ORF101323 - 0.12 12.4 39.5 0.12 12.4 2.3 3.2 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAGA PF09237.11 ORF101323 - 0.15 11.9 0.0 0.34 10.8 0.0 1.6 1 0 0 1 1 1 0 GAGA factor Golgin_A5 PF09787.9 ORF101323 - 0.39 10.2 34.2 0.52 9.7 14.8 2.0 1 1 1 2 2 2 0 Golgin subfamily A member 5 GAS PF13851.6 ORF101323 - 0.88 8.9 39.8 2 7.7 27.0 2.7 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding CENP-H PF05837.12 ORF101323 - 1.1 9.7 31.1 0.22 12.0 4.7 3.5 1 1 1 3 3 3 0 Centromere protein H (CENP-H) Spc24 PF08286.11 ORF101323 - 1.3 9.3 33.1 0.11 12.7 5.2 3.6 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 DUF724 PF05266.14 ORF101323 - 1.4 8.7 33.1 0.027 14.3 6.9 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF724) APG6_N PF17675.1 ORF101323 - 4.4 7.8 40.0 10 6.6 16.3 3.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Jnk-SapK_ap_N PF09744.9 ORF101323 - 4.9 7.4 34.4 1 9.6 12.1 2.4 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 JIP_LZII PF16471.5 ORF101323 - 5.4 7.3 23.6 0.61 10.3 6.7 3.6 2 2 2 4 4 4 0 JNK-interacting protein leucine zipper II DMPK_coil PF08826.10 ORF101323 - 5.5 7.2 31.1 1.5 9.0 5.4 4.4 2 2 2 4 4 4 0 DMPK coiled coil domain like DUF3450 PF11932.8 ORF101323 - 9.2 5.5 28.2 0.18 11.1 10.3 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Seryl_tRNA_N PF02403.22 ORF101323 - 9.8 6.5 34.3 1.4 9.2 14.0 2.7 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain RRM_1 PF00076.22 ORF100721 - 1e-12 47.7 0.1 1.6e-12 47.1 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF100721 - 7e-12 44.9 16.2 9.1e-06 25.5 5.3 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF100721 - 2.3e-05 24.0 17.4 0.0059 16.3 5.7 2.4 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF100721 - 0.0021 18.0 15.2 0.022 14.7 8.0 2.4 1 1 1 2 2 2 2 Zinc knuckle Limkain-b1 PF11608.8 ORF100721 - 0.0023 18.0 0.0 0.0043 17.1 0.0 1.4 1 0 0 1 1 1 1 Limkain b1 RRM_3 PF08777.11 ORF100721 - 0.0068 16.4 0.2 0.012 15.7 0.2 1.4 1 0 0 1 1 1 1 RNA binding motif ProRS-C_1 PF09180.11 ORF100721 - 0.008 16.4 1.0 0.012 15.8 0.1 1.7 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal zf-CCHC_4 PF14392.6 ORF100721 - 0.011 15.5 8.0 0.29 10.9 1.3 2.5 2 0 0 2 2 2 0 Zinc knuckle Nup35_RRM_2 PF14605.6 ORF100721 - 0.015 15.3 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 ORF100721 - 0.019 15.1 0.1 0.035 14.2 0.1 1.5 1 1 0 1 1 1 0 RNA recognition motif RNA_bind PF08675.11 ORF100721 - 0.037 14.0 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 RNA binding domain DbpA PF03880.15 ORF100721 - 0.053 13.5 0.4 0.089 12.8 0.4 1.4 1 0 0 1 1 1 0 DbpA RNA binding domain NPR3 PF03666.13 ORF100721 - 1.6 7.5 4.3 1.9 7.2 4.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 zf-CCHC_2 PF13696.6 ORF100721 - 2 8.3 18.2 5 7.0 4.9 2.4 2 0 0 2 2 2 0 Zinc knuckle Vut_1 PF02592.15 ORF100366 - 8.7e-37 126.7 14.1 8.7e-37 126.7 14.1 1.7 2 0 0 2 2 2 1 Putative vitamin uptake transporter DUF373 PF04123.13 ORF100366 - 0.9 8.9 5.8 1.3 8.4 5.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF373) YesK PF14150.6 ORF100366 - 2.2 8.5 11.0 0.076 13.2 2.9 2.5 3 0 0 3 3 3 0 YesK-like protein DUF3361 PF11841.8 NODE_33039_length_658_cov_3.807384_g26278_i0forward_frame_1 - 0.044 13.7 0.1 0.078 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3361) PRCC PF10253.9 NODE_33020_length_658_cov_184.470305_g1699_i4forward_frame_1 - 0.04 14.7 4.9 0.047 14.5 4.9 1.2 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting Nod1 PF17114.5 NODE_33005_length_658_cov_16572.491172_g14721_i2forward_frame_1 - 0.12 12.5 5.5 0.2 11.8 5.5 1.3 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 GDP_Man_Dehyd PF16363.5 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 1.8e-65 221.5 0.0 2.2e-65 221.3 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 1.8e-35 122.5 0.0 2.2e-35 122.3 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 1.4e-06 27.7 0.0 2.2e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 9.5e-05 21.7 0.0 0.00012 21.3 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Glyco_transf_4 PF13439.6 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 0.0067 16.4 0.0 0.011 15.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 adh_short PF00106.25 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 0.03 13.8 0.0 0.039 13.4 0.0 1.1 1 0 0 1 1 1 0 short chain dehydrogenase 3Beta_HSD PF01073.19 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 0.067 12.2 0.0 0.083 11.9 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family KR PF08659.10 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 0.076 12.9 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 KR domain Glyco_trans_4_2 PF13477.6 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 0.097 12.7 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase 4-like NmrA PF05368.13 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_1 - 0.1 12.2 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Peptidase_C92 PF05708.12 NODE_32997_length_659_cov_5.395833_g26246_i0reverse_frame_1 - 2.6e-51 174.1 0.0 3e-51 173.9 0.0 1.0 1 0 0 1 1 1 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DUF3731 PF12531.8 NODE_32997_length_659_cov_5.395833_g26246_i0reverse_frame_1 - 0.038 13.8 0.2 0.088 12.6 0.1 1.5 1 1 0 1 1 1 0 DNA-K related protein PMSI1 PF15322.6 NODE_32997_length_659_cov_5.395833_g26246_i0forward_frame_1 - 0.041 13.3 0.9 0.06 12.8 0.9 1.3 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative RE_MamI PF09567.10 NODE_32991_length_659_cov_87.754808_g26242_i0forward_frame_1 - 0.021 14.4 0.2 0.028 14.1 0.2 1.3 1 0 0 1 1 1 0 MamI restriction endonuclease RCC1_2 PF13540.6 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 1.4e-44 149.0 40.4 9.6e-11 41.2 0.6 6.0 6 0 0 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 1.2e-05 25.8 53.6 0.9 10.2 2.4 9.7 6 5 1 7 7 7 4 Regulator of chromosome condensation (RCC1) repeat Kelch_5 PF13854.6 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 0.035 14.1 7.1 5 7.2 0.1 4.9 5 0 0 5 5 5 0 Kelch motif Peptidase_C58 PF03543.14 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 0.098 12.4 0.0 36 4.0 0.0 3.5 4 0 0 4 4 4 0 Yersinia/Haemophilus virulence surface antigen Kelch_6 PF13964.6 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 0.6 10.5 5.1 7.1 7.1 0.2 4.0 5 0 0 5 5 5 0 Kelch motif Kelch_4 PF13418.6 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 2.3 8.3 8.6 6.3 6.9 0.1 4.0 5 0 0 5 5 5 0 Galactose oxidase, central domain Vut_1 PF02592.15 NODE_32919_length_660_cov_1860.112000_g7162_i1reverse_frame_1 - 0.094 13.0 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative vitamin uptake transporter Acetyltransf_16 PF05301.11 NODE_32911_length_661_cov_3.214058_g26170_i0reverse_frame_3 - 1e-44 152.4 0.9 1.3e-44 152.1 0.9 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Acetyltransf_7 PF13508.7 NODE_32911_length_661_cov_3.214058_g26170_i0reverse_frame_3 - 0.002 18.5 0.0 0.0034 17.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_32911_length_661_cov_3.214058_g26170_i0reverse_frame_3 - 0.016 15.4 0.0 0.025 14.8 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 NODE_32911_length_661_cov_3.214058_g26170_i0reverse_frame_3 - 0.05 13.5 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks86.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks86.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks86.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks86.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TetR_N PF00440.23 NODE_32909_length_661_cov_3.412141_g26168_i0reverse_frame_2 - 0.013 15.3 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family adh_short PF00106.25 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 2.3e-34 118.6 0.8 2.8e-34 118.3 0.8 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 1e-23 84.1 1.5 1.4e-23 83.7 1.5 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.00027 20.5 0.2 0.00033 20.2 0.2 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.009 16.6 0.1 0.018 15.6 0.1 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.6 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.021 14.7 1.1 0.025 14.5 1.1 1.2 1 0 0 1 1 1 0 NAD(P)H-binding Eno-Rase_NADH_b PF12242.8 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.027 14.2 0.2 0.38 10.6 0.1 2.2 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase THF_DHG_CYH_C PF02882.19 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.1 11.9 0.0 0.23 10.8 0.0 1.6 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NmrA PF05368.13 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.22 11.0 1.1 0.3 10.6 1.1 1.2 1 0 0 1 1 1 0 NmrA-like family DUF4164 PF13747.6 NODE_32898_length_661_cov_97.669329_g26159_i0reverse_frame_3 - 0.027 14.7 1.2 0.18 12.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) Phage_lysozyme2 PF18013.1 NODE_32898_length_661_cov_97.669329_g26159_i0reverse_frame_3 - 0.062 13.3 1.3 0.075 13.0 0.4 1.6 2 0 0 2 2 2 0 Phage tail lysozyme DUF848 PF05852.11 NODE_32898_length_661_cov_97.669329_g26159_i0reverse_frame_3 - 4.2 7.5 10.6 0.36 10.9 2.2 2.2 1 1 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) DIM1 PF02966.16 NODE_32897_length_661_cov_103.785942_g26158_i0reverse_frame_2 - 0.0081 15.9 2.6 0.012 15.4 1.5 1.7 2 0 0 2 2 2 1 Mitosis protein DIM1 AAA_lid_9 PF17871.1 NODE_32895_length_661_cov_106.688498_g26156_i0reverse_frame_3 - 0.05 13.5 1.2 7 6.6 0.0 2.2 1 1 1 2 2 2 0 AAA lid domain Sex_peptide PF08138.11 NODE_32874_length_661_cov_304.682109_g26137_i0reverse_frame_3 - 0.041 14.0 0.2 0.041 14.0 0.2 1.9 2 0 0 2 2 2 0 Sex peptide (SP) family SNF5 PF04855.12 NODE_32854_length_662_cov_47.269537_g26121_i0reverse_frame_3 - 0.18 11.6 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 SNF5 / SMARCB1 / INI1 DUF5437 PF17505.2 NODE_32840_length_662_cov_145.610845_g26108_i0forward_frame_3 - 0.1 12.7 0.1 0.18 11.9 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5437) RCC1_2 PF13540.6 NODE_32831_length_662_cov_212.207337_g26100_i0forward_frame_3 - 1.4e-08 34.3 14.0 0.028 14.2 0.1 5.3 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Phage_P2_GpU PF06995.11 NODE_32831_length_662_cov_212.207337_g26100_i0forward_frame_3 - 0.033 13.8 0.1 13 5.5 0.0 3.5 3 1 1 4 4 4 0 Phage P2 GpU Spectrin PF00435.21 NODE_32831_length_662_cov_212.207337_g26100_i0forward_frame_3 - 0.05 14.1 0.1 65 4.1 0.0 4.0 4 1 1 5 5 5 0 Spectrin repeat SASA PF03629.18 NODE_32822_length_662_cov_390.612440_g26092_i0forward_frame_3 - 0.13 11.8 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Carbohydrate esterase, sialic acid-specific acetylesterase Cytochrom_B559 PF00283.19 NODE_32822_length_662_cov_390.612440_g26092_i0forward_frame_2 - 0.0077 15.6 0.1 0.018 14.4 0.1 1.6 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Adeno_E3_CR2 PF02439.15 NODE_32818_length_662_cov_1893.963317_g26088_i0reverse_frame_2 - 0.11 12.3 2.6 0.23 11.2 2.6 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 AA_permease_2 PF13520.6 NODE_32802_length_663_cov_3.528662_g26075_i0forward_frame_2 - 5.9e-09 35.3 25.5 6.6e-09 35.1 25.5 1.1 1 0 0 1 1 1 1 Amino acid permease MASE4 PF17158.4 NODE_32802_length_663_cov_3.528662_g26075_i0forward_frame_2 - 0.0031 16.8 0.4 0.0049 16.2 0.4 1.3 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain YrvL PF14184.6 NODE_32802_length_663_cov_3.528662_g26075_i0forward_frame_2 - 0.05 13.7 0.8 0.05 13.7 0.8 1.7 2 0 0 2 2 2 0 Regulatory protein YrvL NODP PF07684.12 NODE_32801_length_663_cov_3.601911_g26074_i0forward_frame_3 - 0.08 13.1 0.1 0.22 11.7 0.1 1.7 1 0 0 1 1 1 0 NOTCH protein DUF1856 PF08983.10 NODE_32801_length_663_cov_3.601911_g26074_i0forward_frame_3 - 1.5 9.1 12.1 2.5 8.4 9.7 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF1856) 4PPT_N PF17837.1 NODE_32800_length_663_cov_3.757962_g26073_i0reverse_frame_2 - 2.7e-19 69.1 0.7 6e-19 67.9 0.3 1.7 2 0 0 2 2 2 1 4'-phosphopantetheinyl transferase N-terminal domain ACPS PF01648.20 NODE_32800_length_663_cov_3.757962_g26073_i0reverse_frame_2 - 3e-11 43.4 0.4 1e-10 41.7 0.1 1.9 2 0 0 2 2 2 1 4'-phosphopantetheinyl transferase superfamily MCC-bdg_PDZ PF10506.9 NODE_32796_length_663_cov_61.937898_g26069_i0reverse_frame_2 - 0.053 13.5 2.9 0.089 12.8 2.0 1.8 2 0 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome PAP2 PF01569.21 NODE_32788_length_663_cov_109.089172_g26061_i0reverse_frame_2 - 6.7e-14 51.8 2.6 1.1e-13 51.1 2.6 1.3 1 0 0 1 1 1 1 PAP2 superfamily DNA_primase_lrg PF04104.14 NODE_32783_length_663_cov_133.033439_g26057_i0forward_frame_3 - 1.5e-12 47.5 0.0 2.1e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit PRKCSH PF07915.13 NODE_32775_length_663_cov_217.156051_g26049_i0reverse_frame_3 - 2.4 9.2 7.0 3.9 8.6 1.2 2.3 2 0 0 2 2 2 0 Glucosidase II beta subunit-like protein Lipase_C PF18067.1 ORF96657 - 0.064 13.8 0.0 0.12 13.0 0.0 1.5 1 0 0 1 1 1 0 Lipase C-terminal domain Nucleoporin2 PF04096.14 ORF96657 - 0.085 13.0 4.0 3 8.0 0.5 2.3 2 0 0 2 2 2 0 Nucleoporin autopeptidase Methyltransf_21 PF05050.12 ORF96046 - 9.3e-08 32.3 0.0 1.2e-07 32.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain CSD PF00313.22 ORF96005 - 5.8e-05 22.9 0.2 0.00012 21.8 0.2 1.6 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain S1_2 PF13509.6 ORF96005 - 0.21 11.7 0.0 2.2 8.4 0.0 2.1 1 1 1 2 2 2 0 S1 domain HDV_ag PF01517.18 ORF95616 - 2.2 8.0 8.0 0.11 12.2 2.4 1.6 2 0 0 2 2 2 0 Hepatitis delta virus delta antigen betaPIX_CC PF16523.5 ORF94857 - 0.14 12.0 2.8 0.53 10.1 0.9 2.1 2 0 0 2 2 2 0 betaPIX coiled coil Amidase PF01425.21 ORF94194 - 5.7e-15 55.2 0.0 5.8e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Amidase FGF PF00167.18 ORF92328 - 0.032 14.3 0.0 0.99 9.5 0.0 2.4 2 1 0 2 2 2 0 Fibroblast growth factor U71 PF17474.2 ORF91394 - 0.11 12.4 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Tegument protein UL11 homolog MORN PF02493.20 ORF90665 - 3.8e-14 51.6 29.0 5e-05 22.9 1.5 6.7 6 1 0 6 6 6 5 MORN repeat PMR5N PF14416.6 ORF90665 - 0.39 11.1 6.5 0.89 9.9 0.6 3.6 1 1 2 3 3 3 0 PMR5 N terminal Domain Homeodomain PF00046.29 ORF87348 - 9e-08 31.9 3.0 2.3e-07 30.6 3.0 1.7 1 0 0 1 1 1 1 Homeodomain DUF4672 PF15716.5 ORF87348 - 2 8.0 4.1 1.7 8.2 0.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4672) ALAD PF00490.21 ORF8643 - 1.6e-58 198.4 0.0 1.8e-58 198.2 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Pkinase PF00069.25 ORF86233 - 1.1e-37 129.9 0.1 1.3e-37 129.7 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86233 - 1.6e-27 96.4 0.0 2e-27 96.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF86233 - 4.3e-09 36.1 0.0 5.6e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF86233 - 0.00035 19.5 0.0 0.00051 18.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF86233 - 0.17 11.2 0.2 0.3 10.4 0.2 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RVT_1 PF00078.27 ORF84581 - 0.00061 19.4 0.0 0.00075 19.1 0.0 1.2 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Fib_alpha PF08702.10 ORF80795 - 0.013 15.7 3.8 0.013 15.7 3.8 1.6 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 ORF80795 - 0.029 13.9 5.8 0.036 13.6 5.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit NPV_P10 PF05531.12 ORF80795 - 0.031 14.8 5.2 0.78 10.2 1.7 2.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DNA_ligase_A_N PF04675.14 ORF80795 - 0.053 13.9 4.2 0.16 12.3 4.2 1.9 1 1 0 1 1 1 0 DNA ligase N terminus Jnk-SapK_ap_N PF09744.9 ORF80795 - 0.063 13.5 10.3 0.1 12.8 10.2 1.4 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF948 PF06103.11 ORF80795 - 0.28 11.5 5.7 1.8 8.8 0.5 3.4 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) DUF4407 PF14362.6 ORF80795 - 0.29 10.4 6.4 0.37 10.1 6.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Vps51 PF08700.11 ORF80795 - 0.34 11.0 10.3 0.19 11.8 3.7 2.9 2 1 0 2 2 2 0 Vps51/Vps67 Phage_GPO PF05929.11 ORF80795 - 0.36 10.4 5.0 0.46 10.1 5.0 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Seryl_tRNA_N PF02403.22 ORF80795 - 0.47 10.7 7.6 0.86 9.9 5.2 2.2 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF2408 PF10303.9 ORF80795 - 0.49 10.9 7.3 0.75 10.4 7.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Synaptobrevin PF00957.21 ORF80795 - 0.68 9.8 3.6 0.4 10.5 0.8 2.0 2 0 0 2 2 2 0 Synaptobrevin FUSC PF04632.12 ORF80795 - 1 7.8 14.4 0.06 11.9 2.6 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein family Fzo_mitofusin PF04799.13 ORF80795 - 3.7 7.1 8.3 11 5.6 6.7 2.2 1 1 2 3 3 3 0 fzo-like conserved region DUF1664 PF07889.12 ORF80795 - 7.9 6.5 6.8 3 7.9 3.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 ORF80795 - 9.3 6.6 8.3 5 7.5 2.5 2.7 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4140 PF13600.6 ORF78910 - 1.6 9.2 7.5 0.2 12.1 1.0 2.6 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Uds1 PF15456.6 ORF78910 - 2.2 8.5 7.1 0.49 10.6 2.5 2.1 2 0 0 2 2 2 0 Up-regulated During Septation TolB_N PF04052.13 ORF77159 - 0.046 13.9 1.3 2.3 8.4 0.5 2.5 1 1 1 2 2 2 0 TolB amino-terminal domain RR_TM4-6 PF06459.12 ORF77159 - 4.1 7.1 16.8 5.2 6.8 16.8 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CSD PF00313.22 ORF72062 - 1.4e-12 47.2 2.3 8.9e-06 25.5 0.1 2.7 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF72062 - 0.00041 20.0 2.4 0.0083 15.8 0.1 2.6 2 1 0 2 2 2 2 Ribonuclease B OB domain CusF_Ec PF11604.8 ORF72062 - 0.03 14.3 0.1 1.2 9.2 0.0 2.6 3 0 0 3 3 3 0 Copper binding periplasmic protein CusF Lipase_C PF18067.1 ORF69314 - 0.064 13.8 0.0 0.12 13.0 0.0 1.5 1 0 0 1 1 1 0 Lipase C-terminal domain Nucleoporin2 PF04096.14 ORF69314 - 0.085 13.0 4.0 3 8.0 0.5 2.3 2 0 0 2 2 2 0 Nucleoporin autopeptidase RNB PF00773.19 ORF66352 - 2.2e-16 60.1 0.3 3.8e-16 59.3 0.3 1.4 1 0 0 1 1 1 1 RNB domain Rrp44_S1 PF17215.3 ORF66352 - 2.2e-08 33.9 0.1 5.7e-08 32.6 0.1 1.7 1 1 0 1 1 1 1 S1 domain S1 PF00575.23 ORF66352 - 0.072 13.5 0.1 0.24 11.8 0.1 1.9 1 1 0 1 1 1 0 S1 RNA binding domain Aspzincin_M35 PF14521.6 ORF65438 - 6.5e-07 30.0 0.1 1.3e-06 29.0 0.1 1.5 1 0 0 1 1 1 1 Lysine-specific metallo-endopeptidase GST_C PF00043.25 ORF65320 - 2.6e-15 56.4 0.1 4.2e-15 55.8 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF65320 - 2e-11 44.1 0.0 3.5e-11 43.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF65320 - 1.6e-10 41.2 0.0 3.1e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF65320 - 2.2e-09 37.4 0.2 3.8e-09 36.6 0.2 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF65320 - 3.3e-07 30.2 0.0 6.4e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF65320 - 4.3e-05 23.7 0.0 8.7e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF65320 - 0.17 11.7 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain PsaL PF02605.15 ORF63633 - 0.096 12.3 0.4 0.18 11.4 0.4 1.5 1 0 0 1 1 1 0 Photosystem I reaction centre subunit XI Trp_oprn_chp PF09534.10 ORF59177 - 0.018 14.9 1.0 0.024 14.4 1.0 1.4 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) RFX_DNA_binding PF02257.15 ORF54538 - 0.019 15.6 0.3 0.099 13.3 0.0 2.1 2 0 0 2 2 2 0 RFX DNA-binding domain DUF2192 PF09958.9 ORF54538 - 0.04 13.4 0.6 0.057 12.9 0.6 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2192) DUF5641 PF18701.1 ORF54538 - 0.065 13.4 0.5 1.8 8.8 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5641) EamA PF00892.20 ORF53720 - 2.1e-15 57.1 18.1 3.4e-09 37.0 0.5 2.1 2 0 0 2 2 2 2 EamA-like transporter family LRR_6 PF13516.6 ORF52347 - 3.6e-19 67.1 11.0 1.2e-05 24.9 0.1 5.4 5 0 0 5 5 5 4 Leucine Rich repeat LRR_1 PF00560.33 ORF52347 - 0.00045 20.4 0.2 19 6.3 0.0 5.1 5 2 0 5 5 5 1 Leucine Rich Repeat HOASN PF14515.6 ORF52347 - 0.00089 19.6 2.7 2.6 8.5 0.1 4.1 1 1 4 5 5 5 2 Haem-oxygenase-associated N-terminal helices SpoU_sub_bind PF08032.12 ORF52347 - 0.05 13.9 0.1 20 5.6 0.0 3.2 2 1 2 4 4 4 0 RNA 2'-O ribose methyltransferase substrate binding HTH_31 PF13560.6 ORF52347 - 0.15 12.4 0.4 8.4 6.8 0.2 3.4 3 1 0 3 3 3 0 Helix-turn-helix domain LRR_8 PF13855.6 ORF52347 - 0.78 9.6 4.8 14 5.6 0.6 4.0 1 1 2 3 3 3 0 Leucine rich repeat FAM25 PF15825.5 ORF52347 - 0.82 10.1 4.2 13 6.2 0.0 3.7 5 0 0 5 5 5 0 FAM25 family MatE PF01554.18 ORF49976 - 6.2e-12 45.5 5.0 1e-11 44.7 5.0 1.4 1 1 0 1 1 1 1 MatE TAL_FSA PF00923.19 ORF4908 - 2.7e-47 161.5 0.1 5.9e-47 160.4 0.1 1.5 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase Nab2 PF11517.8 ORF4908 - 0.12 12.7 0.0 0.31 11.4 0.0 1.7 1 1 1 2 2 2 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) Nup96 PF12110.8 ORF48244 - 2.8e-06 26.7 1.3 0.0026 17.0 0.0 2.4 2 1 1 3 3 3 2 Nuclear protein 96 AftA_C PF12249.8 ORF48244 - 0.091 12.4 0.2 0.19 11.4 0.2 1.6 1 1 0 1 1 1 0 Arabinofuranosyltransferase A C terminal DUF3732 PF12532.8 ORF47721 - 0.62 9.6 8.0 0.091 12.3 3.6 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3732) Trns_repr_metal PF02583.17 ORF47255 - 0.087 13.2 0.8 0.15 12.4 0.2 1.8 2 0 0 2 2 2 0 Metal-sensitive transcriptional repressor GST_C PF00043.25 ORF46406 - 2.6e-15 56.4 0.1 4.2e-15 55.8 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF46406 - 2e-11 44.1 0.0 3.5e-11 43.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF46406 - 1.6e-10 41.2 0.0 3.1e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF46406 - 2.2e-09 37.4 0.2 3.8e-09 36.6 0.2 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF46406 - 3.3e-07 30.2 0.0 6.4e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF46406 - 4.3e-05 23.7 0.0 8.7e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF46406 - 0.17 11.7 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Pkinase PF00069.25 ORF46208 - 3.2e-28 98.8 0.1 3.6e-28 98.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46208 - 3.5e-21 75.6 0.1 4.3e-21 75.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF46208 - 2e-06 26.8 0.0 2e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF46208 - 0.00062 19.8 0.0 0.002 18.1 0.0 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF46208 - 0.039 12.9 0.1 0.049 12.6 0.1 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Topoisom_bac PF01131.20 ORF46208 - 0.052 12.5 0.1 0.075 12.0 0.1 1.2 1 0 0 1 1 1 0 DNA topoisomerase Kinase-like PF14531.6 ORF46208 - 0.077 12.3 0.1 8.3 5.6 0.0 2.1 2 0 0 2 2 2 0 Kinase-like ABC1 PF03109.16 ORF46208 - 0.16 12.2 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 ABC1 family GST_C PF00043.25 ORF45993 - 2.6e-15 56.4 0.1 4.2e-15 55.8 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF45993 - 2e-11 44.1 0.0 3.5e-11 43.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF45993 - 1.6e-10 41.2 0.0 3.1e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF45993 - 2.2e-09 37.4 0.2 3.8e-09 36.6 0.2 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF45993 - 3.3e-07 30.2 0.0 6.4e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF45993 - 4.3e-05 23.7 0.0 8.7e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF45993 - 0.17 11.7 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain TPR_2 PF07719.17 ORF45417 - 5.5e-06 26.1 11.7 0.0048 16.9 1.4 3.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF45417 - 1.9e-05 24.3 9.1 0.0016 18.2 1.0 3.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF45417 - 0.00015 21.3 10.6 0.0034 17.0 5.1 3.4 3 1 0 3 3 3 1 TPR repeat TPR_17 PF13431.6 ORF45417 - 0.00029 21.0 10.1 0.0018 18.5 0.9 3.6 3 1 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF45417 - 0.0038 17.4 7.6 0.032 14.5 0.1 2.3 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF45417 - 0.0067 17.2 12.2 0.0085 16.8 2.8 3.6 1 1 3 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF45417 - 0.017 15.4 11.7 0.25 11.6 0.2 2.5 1 1 0 2 2 2 0 Tetratricopeptide repeat ChAPs PF09295.10 ORF45417 - 0.02 13.9 1.8 0.025 13.6 1.8 1.2 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) Pept_S41_N PF18294.1 ORF45417 - 0.11 12.5 1.7 0.17 11.9 0.9 1.8 2 0 0 2 2 2 0 Peptidase S41 N-terminal domain TPR_16 PF13432.6 ORF45417 - 0.26 12.0 7.8 2 9.1 0.9 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF45417 - 0.32 11.6 17.3 2.3 8.8 0.7 3.3 1 1 2 3 3 3 0 Tetratricopeptide repeat VMA21 PF09446.10 ORF45417 - 0.37 10.9 1.6 4.8 7.4 1.6 2.2 1 1 0 1 1 1 0 VMA21-like domain TPR_20 PF14561.6 ORF45417 - 0.4 11.0 8.0 0.63 10.4 0.3 2.8 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF45417 - 0.61 10.8 7.3 1.9 9.3 0.5 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF45417 - 0.64 10.0 5.3 3.5 7.6 0.4 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat GST_C_3 PF14497.6 ORF44239 - 2.4e-13 50.1 0.0 3.9e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF44239 - 1.5e-11 44.4 0.0 2.4e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF44239 - 1.1e-07 32.0 0.0 2.3e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF44239 - 1.8e-05 24.5 0.0 3.4e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF44239 - 9.6e-05 22.3 0.0 0.00016 21.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF44239 - 0.0096 16.3 0.0 0.028 14.8 0.0 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Tom37 PF10568.9 ORF44239 - 0.074 13.4 0.0 3.1 8.1 0.0 2.2 2 0 0 2 2 2 0 Outer mitochondrial membrane transport complex protein adh_short PF00106.25 ORF4239 - 3.8e-11 42.8 0.0 4.4e-11 42.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF4239 - 7.8e-07 28.9 0.0 9.9e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF4239 - 0.05 13.5 0.0 0.071 13.0 0.0 1.2 1 0 0 1 1 1 0 KR domain DUF4837 PF16125.5 ORF4239 - 0.05 12.6 1.4 0.073 12.1 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4837) Glyco_tran_WecB PF03808.13 ORF4239 - 0.074 13.0 0.0 0.29 11.0 0.0 1.8 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family YjeF_N PF03853.15 ORF4239 - 0.19 11.6 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 YjeF-related protein N-terminus Pkinase PF00069.25 ORF42032 - 1.1e-37 129.9 0.1 1.3e-37 129.7 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42032 - 1.6e-27 96.4 0.0 2e-27 96.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF42032 - 4.3e-09 36.1 0.0 5.6e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF42032 - 0.00035 19.5 0.0 0.00051 18.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF42032 - 0.17 11.2 0.2 0.3 10.4 0.2 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RFX_DNA_binding PF02257.15 ORF40785 - 0.019 15.6 0.3 0.099 13.3 0.0 2.1 2 0 0 2 2 2 0 RFX DNA-binding domain DUF2192 PF09958.9 ORF40785 - 0.04 13.4 0.6 0.057 12.9 0.6 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2192) DUF5641 PF18701.1 ORF40785 - 0.065 13.4 0.5 1.8 8.8 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5641) Arm-DNA-bind_2 PF12167.8 ORF39456 - 0.018 15.0 0.0 0.041 13.8 0.0 1.6 1 0 0 1 1 1 0 Arm DNA-binding domain Pox_L5 PF04872.13 ORF39000 - 0.044 13.7 1.4 0.13 12.2 0.2 2.1 2 0 0 2 2 2 0 Poxvirus L5 protein family ZYG-11_interact PF05884.12 ORF39000 - 0.099 12.0 0.9 0.15 11.4 0.9 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 FliS PF02561.14 ORF39000 - 0.18 12.1 3.0 0.66 10.3 0.1 2.4 2 0 0 2 2 2 0 Flagellar protein FliS Tex_N PF09371.10 ORF39000 - 0.24 11.1 2.9 0.94 9.1 2.9 2.2 1 1 0 1 1 1 0 Tex-like protein N-terminal domain Turandot PF07240.11 ORF39000 - 2.3 8.3 6.1 6.3 6.8 0.1 3.4 3 2 1 4 4 4 0 Stress-inducible humoral factor Turandot PdaC PF13739.6 ORF39000 - 9.2 7.3 10.1 6.7 7.8 7.0 2.4 1 1 1 2 2 2 0 Deacetylase PdaC OMPdecase PF00215.24 ORF37638 - 1.2e-25 90.4 0.1 1.4e-25 90.2 0.1 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family CUE PF02845.16 ORF37274 - 6.5e-08 32.1 0.1 1e-07 31.5 0.1 1.4 1 0 0 1 1 1 1 CUE domain BUD22 PF09073.10 ORF37274 - 0.1 12.0 25.2 0.13 11.6 25.2 1.1 1 0 0 1 1 1 0 BUD22 DUF2457 PF10446.9 ORF37274 - 0.37 9.9 25.8 0.54 9.3 25.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF4834 PF16118.5 ORF37274 - 0.89 10.6 15.7 0.96 10.5 3.4 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) LAP1C PF05609.12 ORF37274 - 1.1 8.3 19.0 1.3 8.0 19.0 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) CBF PF03914.17 ORF37274 - 9 6.3 6.7 2.4 8.2 1.1 2.1 2 0 0 2 2 2 0 CBF/Mak21 family RPN2_C PF18004.1 ORF37274 - 9.4 6.1 20.1 4.4 7.2 9.3 2.2 2 0 0 2 2 2 0 26S proteasome regulatory subunit RPN2 C-terminal domain DUF5320 PF17253.2 ORF36308 - 0.003 18.6 0.7 0.0047 18.0 0.2 1.5 2 0 0 2 2 2 1 Family of unknown function (DUF5320) Pro_CA PF00484.19 ORF34830 - 2.1e-50 171.1 0.0 2.6e-50 170.8 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase Ribosomal_L5e PF17144.4 ORF33353 - 2.6e-62 209.6 0.0 3.3e-62 209.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 Peroxin-22 PF12827.7 ORF33076 - 0.25 11.3 0.0 0.5 10.3 0.0 1.5 1 1 1 2 2 2 0 Peroxisomal biogenesis protein family Kringle PF00051.18 ORF3305 - 0.12 12.7 0.6 0.22 11.9 0.1 1.7 2 0 0 2 2 2 0 Kringle domain DUF4407 PF14362.6 ORF32121 - 0.14 11.5 3.2 0.17 11.2 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CobU PF02283.16 ORF32121 - 0.16 11.6 3.5 0.22 11.1 3.5 1.1 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase DUF2443 PF10398.9 ORF32121 - 0.49 10.5 3.5 0.88 9.7 3.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) FidL_like PF15941.5 ORF32121 - 2.6 8.6 6.1 4.4 7.8 6.1 1.3 1 0 0 1 1 1 0 FidL-like putative membrane protein Abhydrolase_3 PF07859.13 ORF31712 - 5.3e-12 46.1 0.0 7.4e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Ank_2 PF12796.7 ORF30866 - 9.4e-41 138.3 5.9 8.3e-11 42.3 0.1 3.2 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF30866 - 2.6e-29 101.2 0.4 1.1e-08 35.5 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF30866 - 7.8e-25 86.6 4.0 4.4e-08 33.2 0.1 4.8 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF30866 - 8.3e-23 79.8 4.8 0.00053 20.3 0.1 5.8 6 0 0 6 6 6 5 Ankyrin repeat Ank_3 PF13606.6 ORF30866 - 7.7e-19 65.8 0.1 0.014 15.9 0.0 5.9 6 0 0 6 6 6 5 Ankyrin repeat Pkinase PF00069.25 ORF29957 - 3.2e-28 98.8 0.1 3.6e-28 98.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29957 - 3.5e-21 75.6 0.1 4.3e-21 75.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF29957 - 2e-06 26.8 0.0 2e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF29957 - 0.00062 19.8 0.0 0.002 18.1 0.0 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF29957 - 0.039 12.9 0.1 0.049 12.6 0.1 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Topoisom_bac PF01131.20 ORF29957 - 0.052 12.5 0.1 0.075 12.0 0.1 1.2 1 0 0 1 1 1 0 DNA topoisomerase Kinase-like PF14531.6 ORF29957 - 0.077 12.3 0.1 8.3 5.6 0.0 2.1 2 0 0 2 2 2 0 Kinase-like ABC1 PF03109.16 ORF29957 - 0.16 12.2 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 ABC1 family CoA_trans PF01144.23 ORF29090 - 7.3e-71 238.0 0.1 8.2e-71 237.8 0.1 1.0 1 0 0 1 1 1 1 Coenzyme A transferase AcetylCoA_hydro PF02550.15 ORF29090 - 0.11 12.4 0.0 0.25 11.3 0.0 1.6 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase N-terminal domain Ras PF00071.22 ORF27750 - 6.2e-23 81.2 1.6 7.4e-23 80.9 1.6 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF27750 - 1.3e-14 54.5 0.6 1.9e-14 53.9 0.6 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF27750 - 8.3e-09 35.1 0.2 9.7e-09 34.9 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF27750 - 4.1e-08 33.3 0.1 5.9e-08 32.8 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF27750 - 3.3e-05 24.5 0.3 4e-05 24.2 0.3 1.2 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF27750 - 5.9e-05 23.0 0.2 0.012 15.5 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 ORF27750 - 0.00016 21.3 0.1 0.00033 20.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain GTP_EFTU PF00009.27 ORF27750 - 0.0017 18.0 1.4 0.05 13.1 1.4 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 ORF27750 - 0.0036 17.4 0.2 0.23 11.5 0.2 2.3 1 1 1 2 2 2 1 Dynamin family SMC_N PF02463.19 ORF27750 - 0.0061 16.0 0.2 0.01 15.3 0.2 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 ORF27750 - 0.0067 17.0 0.2 0.0085 16.6 0.2 1.5 1 1 0 1 1 1 1 ABC transporter RNA_helicase PF00910.22 ORF27750 - 0.0068 16.8 0.2 0.015 15.7 0.2 1.6 1 1 0 1 1 1 1 RNA helicase dNK PF01712.19 ORF27750 - 0.0095 15.8 0.3 0.13 12.1 0.1 2.1 2 0 0 2 2 2 1 Deoxynucleoside kinase IIGP PF05049.13 ORF27750 - 0.013 14.6 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA_21 PF13304.6 ORF27750 - 0.03 14.1 0.0 0.038 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system PRK PF00485.18 ORF27750 - 0.031 14.0 0.1 0.066 13.0 0.1 1.5 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 ORF27750 - 0.11 12.4 0.0 0.3 11.0 0.0 1.7 2 0 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 ORF27750 - 0.15 12.3 0.0 0.23 11.7 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF27750 - 0.19 12.0 0.2 5.8 7.1 0.0 2.0 1 1 0 1 1 1 0 AAA domain Pkinase PF00069.25 ORF26859 - 0.0024 17.3 0.0 0.0033 16.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Mito_carr PF00153.27 ORF26745 - 2.2e-38 130.1 0.1 8.2e-18 64.1 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein Serine_protease PF18405.1 ORF26745 - 0.19 10.9 1.4 15 4.6 0.1 2.5 1 1 1 3 3 3 0 Gammaproteobacterial serine protease ADP_ribosyl_GH PF03747.14 ORF2603 - 4.8e-10 39.7 0.1 9e-10 38.8 0.1 1.4 1 1 0 1 1 1 1 ADP-ribosylglycohydrolase HDV_ag PF01517.18 ORF25149 - 2.2 8.0 8.0 0.11 12.2 2.4 1.6 2 0 0 2 2 2 0 Hepatitis delta virus delta antigen DUF4100 PF13352.6 ORF2435 - 0.12 12.2 0.3 0.16 11.7 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4100) Bestrophin PF01062.21 ORF21941 - 0.0001 21.8 1.2 0.00014 21.4 1.2 1.2 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Biotin_carb_C PF02785.19 ORF20459 - 7.6e-39 132.1 0.0 1.1e-38 131.6 0.0 1.2 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain CPSase_L_D2 PF02786.17 ORF20459 - 2.2e-22 79.6 0.0 4.2e-22 78.7 0.0 1.5 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain POTRA_TamA_1 PF17243.2 ORF20459 - 0.098 12.8 0.0 0.19 11.8 0.0 1.6 1 0 0 1 1 1 0 POTRA domain TamA domain 1 Pox_L5 PF04872.13 ORF1683 - 0.044 13.7 1.4 0.13 12.2 0.2 2.1 2 0 0 2 2 2 0 Poxvirus L5 protein family ZYG-11_interact PF05884.12 ORF1683 - 0.099 12.0 0.9 0.15 11.4 0.9 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 FliS PF02561.14 ORF1683 - 0.18 12.1 3.0 0.66 10.3 0.1 2.4 2 0 0 2 2 2 0 Flagellar protein FliS Tex_N PF09371.10 ORF1683 - 0.24 11.1 2.9 0.94 9.1 2.9 2.2 1 1 0 1 1 1 0 Tex-like protein N-terminal domain Turandot PF07240.11 ORF1683 - 2.3 8.3 6.1 6.3 6.8 0.1 3.4 3 2 1 4 4 4 0 Stress-inducible humoral factor Turandot PdaC PF13739.6 ORF1683 - 9.2 7.3 10.1 6.7 7.8 7.0 2.4 1 1 1 2 2 2 0 Deacetylase PdaC Pribosyltran PF00156.27 ORF15391 - 3.1e-12 46.3 0.0 4.1e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain LGT PF01790.18 ORF15391 - 0.15 11.2 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 Prolipoprotein diacylglyceryl transferase PBP1_TM PF14812.6 ORF12434 - 0.56 10.6 4.0 0.23 11.8 1.0 1.9 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal RVT_N PF13655.6 ORF11918 - 0.0062 16.8 1.6 0.0079 16.4 0.3 1.8 2 0 0 2 2 1 1 N-terminal domain of reverse transcriptase FlxA PF14282.6 ORF11918 - 0.0097 15.9 9.5 0.017 15.1 7.2 2.3 2 1 0 2 2 2 1 FlxA-like protein Vps54_N PF10475.9 ORF11918 - 0.072 12.4 0.6 0.085 12.1 0.6 1.1 1 0 0 1 1 1 0 Vacuolar-sorting protein 54, of GARP complex Arg_decarbox_C PF17944.1 ORF11918 - 0.092 13.3 0.6 0.4 11.3 0.2 2.3 2 0 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension DUF948 PF06103.11 ORF11918 - 0.16 12.2 1.6 0.36 11.1 1.2 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF3037 PF11236.8 ORF11918 - 0.26 11.7 2.4 0.93 9.9 0.6 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF3037) PHM7_cyt PF14703.6 ORF11918 - 0.61 10.3 4.5 0.54 10.5 1.6 2.0 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Spc7 PF08317.11 ORF11918 - 5.5 5.8 14.2 0.34 9.8 8.0 1.8 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF1090 PF06476.12 ORF11918 - 6 7.0 12.1 0.26 11.4 4.1 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF1090) FlgN PF05130.12 ORF11918 - 6.5 7.3 11.5 2e+02 2.4 11.5 2.3 1 1 0 1 1 1 0 FlgN protein HIP1_clath_bdg PF16515.5 ORF11918 - 7.2 7.3 15.5 1.1 9.9 7.7 2.4 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 YkyA PF10368.9 ORF11918 - 7.9 6.1 12.2 1.4 8.5 7.6 1.8 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein DUF4404 PF14357.6 ORF11835 - 0.31 11.7 0.2 0.31 11.7 0.2 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4404) eRF1_1 PF03463.15 ORF111844 - 2e-20 73.1 0.1 3.8e-20 72.2 0.1 1.5 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_2 PF03464.15 ORF111844 - 2.2e-18 66.8 0.2 2.8e-18 66.5 0.2 1.1 1 0 0 1 1 1 1 eRF1 domain 2 SRI PF08236.11 ORF11096 - 0.045 13.9 7.1 0.081 13.1 0.1 2.7 3 0 0 3 3 3 0 SRI (Set2 Rpb1 interacting) domain NIF PF03031.18 ORF109998 - 3.3e-05 23.7 0.0 6.2e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase zf-C2H2_11 PF16622.5 ORF108871 - 0.046 13.5 0.1 0.088 12.6 0.1 1.4 1 0 0 1 1 1 0 zinc-finger C2H2-type zf-C2H2 PF00096.26 ORF108871 - 0.12 12.8 0.2 0.28 11.7 0.2 1.6 1 0 0 1 1 1 0 Zinc finger, C2H2 type Baculo_PEP_C PF04513.12 ORF108779 - 0.077 13.0 1.4 0.26 11.3 1.6 1.7 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Matrilin_ccoil PF10393.9 ORF108779 - 0.84 9.5 3.1 3.8 7.4 0.2 2.7 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin Rhomboid PF01694.22 ORF107312 - 0.2 11.7 8.5 0.39 10.7 2.7 2.6 1 1 1 2 2 2 0 Rhomboid family DUF456 PF04306.13 ORF107312 - 0.25 11.6 6.9 1.2 9.4 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF456) MARVEL PF01284.23 ORF107312 - 6.9 6.7 15.0 1.4 8.9 6.9 2.5 2 1 0 2 2 2 0 Membrane-associating domain Patched PF02460.18 ORF104823 - 3.9e-11 41.8 22.6 4.8e-11 41.5 22.6 1.0 1 0 0 1 1 1 1 Patched family MMPL PF03176.15 ORF104823 - 0.00037 19.5 16.9 0.0005 19.1 16.9 1.1 1 0 0 1 1 1 1 MMPL family SecD_SecF PF02355.16 ORF104823 - 0.036 13.5 17.4 0.053 12.9 17.4 1.3 1 0 0 1 1 1 0 Protein export membrane protein Sterol-sensing PF12349.8 ORF104823 - 0.084 12.7 17.9 0.05 13.4 16.3 1.4 1 1 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation ACR_tran PF00873.19 ORF104823 - 1.1 6.8 18.3 1.4 6.5 18.3 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family PIG-F PF06699.11 ORF104823 - 1.3 9.1 11.8 2.5 8.2 11.8 1.4 1 1 0 1 1 1 0 GPI biosynthesis protein family Pig-F SANT_DAMP1_like PF16282.5 ORF103519 - 0.018 15.2 5.4 4.2 7.6 0.2 3.4 1 1 2 3 3 3 0 SANT/Myb-like domain of DAMP1 NMT PF01233.19 ORF103519 - 0.026 14.4 2.9 0.075 12.9 2.3 1.9 1 1 1 2 2 2 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Shadoo PF14999.6 ORF103016 - 0.015 15.4 1.2 0.031 14.4 1.2 1.6 1 0 0 1 1 1 0 Shadow of prion protein, neuroprotective ubiquitin PF00240.23 ORF102157 - 6.7e-07 29.0 0.1 1.4e-06 28.0 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF102157 - 0.0088 16.5 0.0 0.022 15.2 0.0 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD PF11976.8 ORF102157 - 0.01 15.6 0.1 0.021 14.6 0.1 1.6 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Fib_alpha PF08702.10 ORF102157 - 0.12 12.6 0.1 0.27 11.4 0.1 1.7 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Tma16 PF11176.8 ORF102157 - 0.12 12.3 1.0 9.9 6.0 0.1 2.4 1 1 0 2 2 2 0 Translation machinery-associated protein 16 DUF5320 PF17253.2 ORF101890 - 0.003 18.6 0.7 0.0047 18.0 0.2 1.5 2 0 0 2 2 2 1 Family of unknown function (DUF5320) SelP_N PF04592.14 ORF101890 - 9.9 5.5 12.9 15 4.9 12.9 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region PEX11 PF05648.14 ORF101613 - 4.1e-14 52.6 1.2 7e-07 28.9 0.0 2.0 1 1 1 2 2 2 2 Peroxisomal biogenesis factor 11 (PEX11) DUF1764 PF08576.10 ORF100830 - 2.3 9.2 20.5 1.8 9.5 1.9 2.5 2 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF1764) Cep57_MT_bd PF06657.13 ORF100639 - 0.062 13.7 0.3 24 5.4 0.0 2.8 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 RPAP1_C PF08620.10 ORF100639 - 5.4 7.2 6.6 31 4.8 0.8 2.9 2 0 0 2 2 2 0 RPAP1-like, C-terminal Mur_ligase_C PF02875.21 ORF100529 - 2.4e-11 43.7 0.0 5.5e-11 42.6 0.0 1.6 1 0 0 1 1 1 1 Mur ligase family, glutamate ligase domain Mur_ligase_M PF08245.12 ORF100529 - 0.0086 16.1 0.0 0.02 14.9 0.0 1.6 2 0 0 2 2 2 1 Mur ligase middle domain AI-2E_transport PF01594.16 ORF100104 - 1.5e-15 57.2 9.9 2e-15 56.8 9.9 1.1 1 0 0 1 1 1 1 AI-2E family transporter DUF3040 PF11239.8 ORF100104 - 9 6.7 7.6 0.83 10.0 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3040) YkuD PF03734.14 NODE_33180_length_655_cov_2.035484_g26405_i0forward_frame_1 - 8.8e-19 68.4 0.0 1.2e-18 67.9 0.0 1.2 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain LysM PF01476.20 NODE_33180_length_655_cov_2.035484_g26405_i0forward_frame_1 - 9.9e-11 41.5 0.0 2.3e-10 40.4 0.0 1.6 2 0 0 2 2 2 1 LysM domain FtsZ_C PF12327.8 NODE_33164_length_655_cov_62.150000_g26389_i0reverse_frame_1 - 0.017 15.4 0.0 0.042 14.1 0.0 1.5 1 0 0 1 1 1 0 FtsZ family, C-terminal domain HMG_box PF00505.19 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 2e-20 73.0 7.1 4.2e-17 62.3 0.9 2.3 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 1.6e-16 60.6 5.3 6.6e-12 45.8 0.7 2.3 2 0 0 2 2 2 2 HMG-box domain HMG_box_5 PF14887.6 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 0.0066 16.4 0.2 0.0066 16.4 0.2 1.8 2 0 0 2 2 2 1 HMG (high mobility group) box 5 Protamine_like PF06382.11 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 0.0081 16.4 2.7 0.25 11.5 0.2 2.2 2 0 0 2 2 2 2 Protamine and protamine like DUF3899 PF13038.6 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 2.9 8.5 10.7 0.14 12.7 4.6 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) Indigoidine_A PF04227.12 NODE_33102_length_656_cov_265.256039_g26332_i0reverse_frame_1 - 2.8e-15 56.4 0.1 4.6e-15 55.8 0.1 1.3 1 0 0 1 1 1 1 Indigoidine synthase A like protein TPPII_N PF12583.8 NODE_33081_length_657_cov_3.247588_g26317_i0forward_frame_1 - 0.37 11.4 3.3 0.55 10.8 3.3 1.2 1 0 0 1 1 1 0 Tripeptidyl peptidase II N terminal LRR_6 PF13516.6 NODE_33070_length_657_cov_93.086817_g26306_i0reverse_frame_1 - 3e-11 42.4 7.2 0.11 12.6 0.0 5.5 5 0 0 5 5 5 3 Leucine Rich repeat LRR_4 PF12799.7 NODE_33070_length_657_cov_93.086817_g26306_i0reverse_frame_1 - 6.6e-06 26.4 0.0 2.1 8.9 0.0 3.5 3 0 0 3 3 3 3 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_33070_length_657_cov_93.086817_g26306_i0reverse_frame_1 - 2.7e-05 24.1 0.1 13 6.8 0.0 5.0 5 0 0 5 5 5 1 Leucine Rich Repeat SAP PF02037.27 NODE_33070_length_657_cov_93.086817_g26306_i0reverse_frame_1 - 0.49 10.2 3.0 16 5.4 0.0 3.6 4 0 0 4 4 4 0 SAP domain DUF4633 PF15464.6 NODE_33068_length_657_cov_106.435691_g26304_i0forward_frame_1 - 0.14 12.3 0.0 0.3 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4633) MetOD1 PF18546.1 NODE_33068_length_657_cov_106.435691_g26304_i0forward_frame_1 - 0.24 11.3 2.9 1 9.3 1.2 2.2 1 1 1 2 2 2 0 Metanogen output domain 1 TFIID_NTD2 PF04494.15 NODE_33055_length_657_cov_190.606109_g26292_i0reverse_frame_1 - 0.051 13.8 0.5 0.12 12.6 0.5 1.6 1 1 0 1 1 1 0 WD40 associated region in TFIID subunit, NTD2 domain DUF4240 PF14024.6 NODE_33055_length_657_cov_190.606109_g26292_i0reverse_frame_1 - 0.1 12.8 1.3 2.5 8.3 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4240) S1 PF00575.23 NODE_33042_length_658_cov_2.683788_g26281_i0reverse_frame_3 - 1.5e-21 76.5 0.3 2.5e-21 75.8 0.3 1.4 1 0 0 1 1 1 1 S1 RNA binding domain RNB PF00773.19 NODE_33042_length_658_cov_2.683788_g26281_i0reverse_frame_3 - 9.2e-14 51.5 0.2 1.3e-13 51.0 0.2 1.2 1 0 0 1 1 1 1 RNB domain RNase_II_C_S1 PF18614.1 NODE_33042_length_658_cov_2.683788_g26281_i0reverse_frame_3 - 1.6e-05 24.7 0.1 0.00083 19.2 0.0 2.9 3 0 0 3 3 3 1 RNase II-type exonuclease C-terminal S1 domain RNA_pol_Rbc25 PF08292.12 NODE_33042_length_658_cov_2.683788_g26281_i0reverse_frame_3 - 0.0016 18.7 0.0 0.0024 18.1 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase III subunit Rpc25 Peptidase_S76 PF13611.6 NODE_33039_length_658_cov_3.807384_g26278_i0reverse_frame_2 - 0.1 12.9 0.0 0.2 12.0 0.0 1.5 1 1 0 1 1 1 0 Serine peptidase of plant viral polyprotein, P1 Microtub_bind PF13931.6 NODE_33039_length_658_cov_3.807384_g26278_i0forward_frame_2 - 0.17 12.3 0.3 0.26 11.7 0.3 1.2 1 0 0 1 1 1 0 Kinesin-associated microtubule-binding PGP_phosphatase PF09419.10 NODE_33035_length_658_cov_83.919743_g26275_i0reverse_frame_3 - 2.5e-35 121.6 0.0 3.2e-35 121.2 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial PGP phosphatase Hydrolase_like PF13242.6 NODE_33035_length_658_cov_83.919743_g26275_i0reverse_frame_3 - 0.0016 18.5 0.0 0.0028 17.7 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 NODE_33035_length_658_cov_83.919743_g26275_i0reverse_frame_3 - 0.0025 18.1 0.1 0.16 12.2 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase AAA_28 PF13521.6 NODE_33035_length_658_cov_83.919743_g26275_i0reverse_frame_3 - 0.17 12.1 0.0 0.39 10.9 0.0 1.5 1 1 0 1 1 1 0 AAA domain Pentapeptide_2 PF01469.18 NODE_33020_length_658_cov_184.470305_g1699_i4reverse_frame_3 - 0.44 10.5 13.9 2 8.4 7.0 2.5 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) Pentapeptide PF00805.22 NODE_33020_length_658_cov_184.470305_g1699_i4reverse_frame_2 - 3.1 7.5 8.6 1 9.0 0.5 3.3 4 0 0 4 4 4 0 Pentapeptide repeats (8 copies) Bac_DnaA_C PF08299.11 NODE_33004_length_658_cov_27180.211878_g23263_i25reverse_frame_2 - 0.065 13.3 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix Hexapep PF00132.24 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_2 - 3.8e-07 29.6 0.3 8.2e-07 28.5 0.3 1.6 1 0 0 1 1 1 1 Bacterial transferase hexapeptide (six repeats) Mob_synth_C PF06463.13 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_2 - 0.037 13.9 2.3 0.14 12.1 2.3 1.9 1 1 0 1 1 1 0 Molybdenum Cofactor Synthesis C Hexapep_2 PF14602.6 NODE_33002_length_659_cov_2.238782_g26251_i0forward_frame_2 - 0.046 13.5 0.8 0.2 11.4 0.8 2.0 1 1 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase FAD_binding_2 PF00890.24 NODE_32999_length_659_cov_3.485577_g26248_i0reverse_frame_2 - 3.5e-30 105.4 0.0 4.3e-30 105.1 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 NODE_32999_length_659_cov_3.485577_g26248_i0reverse_frame_2 - 0.0017 18.3 0.1 0.0031 17.5 0.1 1.4 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term VCBS PF13517.6 NODE_32999_length_659_cov_3.485577_g26248_i0forward_frame_2 - 0.017 15.7 0.4 0.07 13.7 0.1 2.0 2 0 0 2 2 2 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella DNA_ligase_OB PF03120.16 NODE_32998_length_659_cov_3.780449_g26247_i0forward_frame_2 - 2.7e-19 68.8 0.2 5e-19 68.0 0.2 1.4 1 0 0 1 1 1 1 NAD-dependent DNA ligase OB-fold domain DNA_ligase_aden PF01653.18 NODE_32998_length_659_cov_3.780449_g26247_i0forward_frame_2 - 0.0022 17.1 0.0 0.0029 16.7 0.0 1.1 1 0 0 1 1 1 1 NAD-dependent DNA ligase adenylation domain DUF5475 PF17569.2 NODE_32994_length_659_cov_78.251603_g26244_i0reverse_frame_2 - 0.037 14.4 0.1 0.075 13.4 0.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5475) COX7a PF02238.15 NODE_32994_length_659_cov_78.251603_g26244_i0forward_frame_3 - 0.36 11.3 3.2 2.7 8.4 0.2 3.0 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VII PDZ_6 PF17820.1 NODE_32992_length_659_cov_81.615385_g26243_i0forward_frame_2 - 0.0011 18.8 0.0 0.0029 17.4 0.0 1.8 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 NODE_32992_length_659_cov_81.615385_g26243_i0forward_frame_2 - 0.031 14.6 0.0 0.08 13.3 0.0 1.7 2 0 0 2 2 2 0 PDZ domain PDZ_2 PF13180.6 NODE_32992_length_659_cov_81.615385_g26243_i0forward_frame_2 - 0.042 14.2 0.0 0.077 13.3 0.0 1.5 1 0 0 1 1 1 0 PDZ domain Peptidase_A24 PF01478.18 NODE_32975_length_659_cov_228.474359_g26226_i0reverse_frame_2 - 2.6 8.5 6.0 0.75 10.2 2.9 1.7 2 0 0 2 2 2 0 Type IV leader peptidase family zf-B_box PF00643.24 NODE_32936_length_660_cov_154.966400_g3523_i4forward_frame_2 - 0.0014 18.7 7.9 0.0014 18.7 7.9 2.3 2 0 0 2 2 2 1 B-box zinc finger PHD PF00628.29 NODE_32936_length_660_cov_154.966400_g3523_i4forward_frame_2 - 0.0029 17.4 3.7 0.0029 17.4 3.7 1.9 2 0 0 2 2 2 1 PHD-finger PHD_2 PF13831.6 NODE_32936_length_660_cov_154.966400_g3523_i4forward_frame_2 - 0.0062 16.1 1.1 0.017 14.6 1.1 1.8 1 0 0 1 1 1 1 PHD-finger Prok-RING_1 PF14446.6 NODE_32936_length_660_cov_154.966400_g3523_i4forward_frame_2 - 0.31 11.0 4.9 0.62 10.0 4.9 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 FhuF_C PF11575.8 NODE_32933_length_660_cov_164.131200_g26188_i0forward_frame_3 - 0.14 12.2 0.2 0.14 12.2 0.2 3.2 3 0 0 3 3 3 0 FhuF 2Fe-2S C-terminal domain OGFr_III PF04680.13 NODE_32933_length_660_cov_164.131200_g26188_i0forward_frame_2 - 7.4 7.4 13.1 5.3 7.8 0.4 4.3 4 2 0 4 4 4 0 Opioid growth factor receptor repeat SPARC_Ca_bdg PF10591.9 NODE_32918_length_660_cov_2094.379200_g26176_i0reverse_frame_3 - 0.025 14.9 3.0 0.04 14.2 3.0 1.5 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Peptidase_M17 PF00883.21 ORF99523 - 6e-82 275.4 1.5 6.6e-82 275.3 1.5 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain PDZ PF00595.24 ORF99523 - 0.04 14.3 0.2 0.24 11.8 0.1 2.1 1 1 1 2 2 2 0 PDZ domain PDZ_2 PF13180.6 ORF99523 - 0.067 13.5 0.0 0.13 12.6 0.0 1.6 1 0 0 1 1 1 0 PDZ domain KIP1 PF07765.12 ORF97820 - 0.0067 16.5 0.4 0.025 14.7 0.3 2.0 2 0 0 2 2 2 1 KIP1-like protein SopE_GEF PF07487.13 ORF97820 - 0.046 13.8 0.1 0.086 12.9 0.1 1.4 1 0 0 1 1 1 0 SopE GEF domain UPF0184 PF03670.13 ORF97757 - 0.46 10.9 1.7 24 5.4 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0184) Fez1 PF06818.15 ORF97722 - 0.52 10.7 14.8 0.72 10.3 14.8 1.2 1 0 0 1 1 1 0 Fez1 Lectin_N PF03954.14 ORF97722 - 0.88 9.3 7.0 2.3 8.0 7.0 1.8 1 1 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF4407 PF14362.6 ORF97722 - 2.5 7.4 9.8 3.3 7.0 9.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Borrelia_P83 PF05262.11 ORF97722 - 2.6 6.4 9.6 3.2 6.2 9.6 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein Adap_comp_sub PF00928.21 ORF97678 - 5.7e-41 140.6 0.0 6.4e-41 140.5 0.0 1.0 1 0 0 1 1 1 1 Adaptor complexes medium subunit family muHD PF10291.9 ORF97678 - 0.0011 18.4 0.0 0.0016 18.0 0.0 1.2 1 0 0 1 1 1 1 Muniscin C-terminal mu homology domain V-SNARE_C PF12352.8 ORF96556 - 6.8e-12 45.5 1.8 1.8e-11 44.2 1.8 1.8 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 ORF96556 - 0.00034 20.5 8.0 0.00034 20.5 0.2 2.9 1 1 2 3 3 3 1 Sec20 PDCD7 PF16021.5 ORF96556 - 0.00039 19.6 7.2 0.0005 19.3 7.2 1.2 1 0 0 1 1 1 1 Programmed cell death protein 7 Exonuc_VII_L PF02601.15 ORF96556 - 0.0034 17.0 5.1 0.004 16.8 5.1 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit TACC_C PF05010.14 ORF96556 - 0.01 15.6 11.6 0.015 15.1 11.6 1.3 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF4795 PF16043.5 ORF96556 - 0.034 13.8 11.1 0.22 11.1 0.8 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) SMAP PF15477.6 ORF96556 - 0.072 14.0 1.7 0.072 14.0 1.7 2.2 1 1 1 2 2 2 0 Small acidic protein family BORCS7 PF16088.5 ORF96556 - 0.079 13.2 4.5 0.17 12.1 4.0 1.9 1 1 0 1 1 1 0 BLOC-1-related complex sub-unit 7 ZapB PF06005.12 ORF96556 - 0.093 13.2 6.8 0.78 10.2 0.1 2.6 1 1 1 2 2 2 0 Cell division protein ZapB FapA PF03961.13 ORF96556 - 0.095 11.3 6.4 0.12 11.0 6.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF1664 PF07889.12 ORF96556 - 0.13 12.3 9.2 1.2 9.2 0.2 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 ORF96556 - 0.15 12.0 8.8 0.59 10.1 0.9 2.2 1 1 1 2 2 2 0 Laminin Domain II YscO-like PF16789.5 ORF96556 - 0.16 12.0 9.2 0.059 13.4 5.1 2.0 1 1 1 2 2 2 0 YscO-like protein Prominin PF05478.11 ORF96556 - 0.31 8.9 7.9 0.38 8.6 7.9 1.2 1 0 0 1 1 1 0 Prominin DUF3450 PF11932.8 ORF96556 - 0.34 10.2 12.2 0.14 11.4 3.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF4407 PF14362.6 ORF96556 - 0.44 9.9 7.4 0.62 9.4 7.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) P4Ha_N PF08336.11 ORF96556 - 0.46 10.5 9.7 0.74 9.8 4.5 2.6 1 1 1 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Prefoldin PF02996.17 ORF96556 - 0.48 10.4 7.1 1.9 8.4 0.1 3.0 1 1 2 3 3 3 0 Prefoldin subunit H-kinase_dim PF02895.14 ORF96556 - 0.81 10.1 5.4 29 5.1 0.0 2.7 2 1 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain Ac76 PF05814.11 ORF96556 - 0.96 9.5 5.1 0.2 11.7 0.8 2.3 2 0 0 2 2 2 0 Orf76 (Ac76) Swi5 PF07061.11 ORF96556 - 1.1 9.4 6.9 2.3e+02 2.0 6.9 2.6 1 1 0 1 1 1 0 Swi5 YabA PF06156.13 ORF96556 - 2.2 9.0 9.5 1.7e+02 2.9 9.4 2.5 1 1 0 1 1 1 0 Initiation control protein YabA BLOC1_2 PF10046.9 ORF96556 - 2.9 8.3 11.3 14 6.1 5.7 2.5 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 BORCS8 PF10167.9 ORF96556 - 3.4 7.7 10.0 0.49 10.4 1.9 2.5 2 1 1 3 3 3 0 BLOC-1-related complex sub-unit 8 SlyX PF04102.12 ORF96556 - 4 8.1 7.8 1.9 9.2 0.2 2.9 2 1 0 2 2 2 0 SlyX Fib_alpha PF08702.10 ORF96556 - 9.7 6.4 14.4 2.1 8.5 0.7 2.1 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family bZIP_Maf PF03131.17 ORF94409 - 0.025 15.1 4.6 0.025 15.1 4.6 1.8 2 0 0 2 2 2 0 bZIP Maf transcription factor SID-1_RNA_chan PF13965.6 ORF94409 - 0.1 11.0 1.1 0.12 10.8 1.1 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Presenilin PF01080.17 ORF94409 - 0.11 11.2 2.2 0.12 11.1 2.2 1.3 1 0 0 1 1 1 0 Presenilin DUF4718 PF15842.5 ORF94409 - 0.29 10.9 6.8 0.47 10.2 6.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) Zip PF02535.22 ORF94409 - 8.2 5.5 5.0 8.8 5.4 5.0 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Snf7 PF03357.21 ORF91244 - 9.3e-19 67.7 27.8 9.3e-19 67.7 27.8 1.9 2 1 1 3 3 3 1 Snf7 DSBA PF01323.20 ORF91244 - 0.07 12.9 5.7 0.087 12.6 4.6 1.7 1 1 1 2 2 2 0 DSBA-like thioredoxin domain DUF2795 PF11387.8 ORF91244 - 0.094 12.9 0.7 0.58 10.4 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2795) DUF2258 PF10015.9 ORF91244 - 0.095 12.9 0.5 0.095 12.9 0.5 2.3 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) DNA_pol_A_exo1 PF01612.20 ORF89132 - 2.3e-07 30.7 0.0 8.8e-07 28.8 0.0 1.7 1 1 0 1 1 1 1 3'-5' exonuclease BPD_transp_1 PF00528.22 ORF87570 - 3.3e-24 85.7 16.9 4.2e-24 85.3 16.9 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component LytTR PF04397.15 ORF85953 - 7.3e-34 115.9 0.5 1.7e-33 114.7 0.1 1.8 2 0 0 2 2 2 1 LytTr DNA-binding domain Response_reg PF00072.24 ORF85953 - 7.1e-18 64.8 0.0 1.3e-17 64.0 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Catalase PF00199.19 ORF82929 - 7.8e-53 179.9 0.0 1.2e-52 179.3 0.0 1.3 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 ORF82929 - 6.3e-12 45.5 0.2 1e-11 44.8 0.2 1.3 1 0 0 1 1 1 1 Catalase-related immune-responsive DUF2031 PF09592.10 ORF82929 - 0.017 14.6 0.1 0.017 14.6 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2031) DUF3854 PF12965.7 ORF82929 - 0.063 13.2 0.2 0.1 12.6 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3854) Tox-REase-2 PF15646.6 ORF82910 - 0.089 13.0 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 ARL2_Bind_BART PF11527.8 ORF79417 - 6e-08 32.8 0.0 8.3e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART Sulfatase PF00884.23 ORF79417 - 0.0006 19.3 0.0 0.00082 18.8 0.0 1.2 1 0 0 1 1 1 1 Sulfatase DUF533 PF04391.12 ORF79415 - 3.1e-49 167.0 0.4 3.9e-49 166.6 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF533) TerB PF05099.13 ORF79415 - 0.0043 17.0 1.1 0.0074 16.2 1.0 1.6 1 1 0 1 1 1 1 Tellurite resistance protein TerB YtxH PF12732.7 ORF79415 - 5.1 7.7 6.3 21 5.7 6.4 2.1 1 1 0 1 1 1 0 YtxH-like protein Adap_comp_sub PF00928.21 ORF79284 - 5.7e-41 140.6 0.0 6.4e-41 140.5 0.0 1.0 1 0 0 1 1 1 1 Adaptor complexes medium subunit family muHD PF10291.9 ORF79284 - 0.0011 18.4 0.0 0.0016 18.0 0.0 1.2 1 0 0 1 1 1 1 Muniscin C-terminal mu homology domain PPR_2 PF13041.6 ORF78545 - 9.8e-39 131.3 0.2 4.2e-10 39.6 0.0 5.3 1 1 4 5 5 5 5 PPR repeat family PPR_3 PF13812.6 ORF78545 - 2.7e-28 97.8 0.0 6e-10 39.1 0.0 4.4 2 1 3 5 5 5 4 Pentatricopeptide repeat domain PPR PF01535.20 ORF78545 - 2.6e-21 74.3 3.3 8.4e-05 22.6 0.0 5.9 6 0 0 6 6 6 5 PPR repeat PPR_1 PF12854.7 ORF78545 - 4.7e-14 51.8 0.0 0.0069 16.1 0.0 6.5 7 1 0 7 7 7 4 PPR repeat PPR_long PF17177.4 ORF78545 - 3.7e-08 33.0 0.0 0.00077 18.9 0.0 2.1 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP Clathrin PF00637.20 ORF78545 - 0.00071 19.5 0.0 0.87 9.5 0.0 3.2 1 1 1 3 3 3 1 Region in Clathrin and VPS Phage_tail_APC PF16778.5 ORF78545 - 0.037 13.9 0.0 0.93 9.4 0.0 2.5 3 0 0 3 3 3 0 Phage tail assembly chaperone protein ATP-grasp_4 PF13535.6 ORF78545 - 0.058 13.0 0.1 5.4 6.6 0.0 3.2 1 1 3 4 4 4 0 ATP-grasp domain Flu_B_NS1 PF02942.14 ORF78545 - 0.12 11.4 0.5 3.7 6.6 0.0 3.0 2 2 2 4 4 4 0 Influenza B non-structural protein (NS1) PYRIN PF02758.16 ORF78545 - 0.14 12.3 0.1 19 5.5 0.0 3.6 5 0 0 5 5 5 0 PAAD/DAPIN/Pyrin domain Kunitz_legume PF00197.18 ORF78545 - 1.3 8.9 5.3 41 4.0 0.1 4.1 1 1 3 5 5 5 0 Trypsin and protease inhibitor DUF5583 PF17821.1 ORF78441 - 0.038 14.0 0.2 1.4 8.9 0.0 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5583) Macro PF01661.21 ORF76137 - 7.2e-05 22.8 0.0 0.0002 21.4 0.0 1.8 1 0 0 1 1 1 1 Macro domain Ras PF00071.22 ORF75496 - 4.9e-55 185.5 0.1 6.1e-55 185.2 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF75496 - 7.6e-37 126.2 0.2 1.6e-36 125.2 0.2 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF75496 - 6e-13 48.6 0.1 8.1e-13 48.2 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family FeoB_N PF02421.18 ORF75496 - 2.6e-05 23.8 0.0 0.0081 15.7 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF75496 - 4.3e-05 23.1 0.1 8.8e-05 22.1 0.1 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF75496 - 0.00029 20.3 0.2 0.00043 19.7 0.2 1.3 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF75496 - 0.00071 19.6 0.1 0.0015 18.6 0.1 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF75496 - 0.0016 18.3 0.0 0.16 11.9 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase AAA_7 PF12775.7 ORF75496 - 0.003 17.1 1.1 0.05 13.1 0.1 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region SRPRB PF09439.10 ORF75496 - 0.015 14.8 0.2 0.026 13.9 0.2 1.6 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_28 PF13521.6 ORF75496 - 0.016 15.4 0.0 0.85 9.8 0.0 2.2 1 1 0 1 1 1 0 AAA domain DUF236 PF03057.14 ORF75496 - 0.055 13.4 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 DUF236 repeat DUF2475 PF10629.9 ORF7512 - 5.9e-10 39.2 1.4 3.3e-07 30.4 0.2 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF2475) Alpha-amyl_C2 PF07821.12 ORF74262 - 3.4e-17 62.4 0.3 5.8e-17 61.7 0.3 1.4 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain Alpha-amylase PF00128.24 ORF74262 - 0.0061 16.2 0.0 0.0082 15.7 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, catalytic domain Ank_4 PF13637.6 ORF7346 - 1.4e-07 31.9 0.1 0.73 10.5 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF7346 - 3.2e-06 27.6 0.0 0.41 11.3 0.0 3.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF7346 - 8.2e-06 25.8 1.2 7.8 7.4 0.0 5.0 5 0 0 5 5 5 2 Ankyrin repeat Ank PF00023.30 ORF7346 - 8.3e-06 26.0 0.0 0.0041 17.5 0.0 3.0 3 1 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF7346 - 0.0035 17.6 0.2 16 5.9 0.0 3.3 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Pkinase PF00069.25 ORF70871 - 8.8e-45 153.1 0.4 1e-44 152.9 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70871 - 3.1e-25 89.0 0.1 3.8e-25 88.7 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF70871 - 2.5e-05 24.0 0.2 0.054 13.1 0.3 2.1 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 PfkB PF00294.24 ORF70837 - 5.9e-16 58.6 1.4 6.9e-09 35.4 0.0 2.2 2 0 0 2 2 2 2 pfkB family carbohydrate kinase HTH_Tnp_IS630 PF01710.16 ORF68723 - 0.022 14.8 3.8 0.022 14.8 3.8 2.7 1 1 2 3 3 3 0 Transposase FPP PF05911.11 ORF68723 - 0.036 12.3 28.0 0.048 11.9 28.0 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil DUF3450 PF11932.8 ORF68723 - 0.32 10.2 27.8 0.021 14.1 13.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) DUF3584 PF12128.8 ORF68723 - 0.51 7.8 31.4 0.46 7.9 24.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) DUF745 PF05335.13 ORF68723 - 0.61 9.8 19.1 0.16 11.6 15.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) CC2-LZ PF16516.5 ORF68723 - 0.67 10.4 27.2 0.081 13.3 5.5 3.4 1 1 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator APG6_N PF17675.1 ORF68723 - 1.3 9.5 35.1 0.19 12.2 2.9 3.1 1 1 2 3 3 3 0 Apg6 coiled-coil region Lebercilin PF15619.6 ORF68723 - 2.1 7.9 40.0 0.11 12.1 14.3 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Fez1 PF06818.15 ORF68723 - 3.1 8.2 28.4 2 8.8 2.2 2.1 1 1 1 2 2 2 0 Fez1 DHR10 PF18595.1 ORF68723 - 4 7.5 32.2 0.99 9.5 8.5 3.9 1 1 3 4 4 4 0 Designed helical repeat protein 10 domain TraF_2 PF13729.6 ORF68723 - 5 6.4 11.6 0.52 9.6 6.4 1.8 1 1 0 1 1 1 0 F plasmid transfer operon, TraF, protein Striatin PF08232.12 ORF68723 - 8.6 6.9 22.7 1.5 9.4 18.0 2.0 1 1 1 2 2 2 0 Striatin family YscO PF07321.12 ORF68723 - 9.9 6.1 26.8 0.78 9.7 1.3 2.8 1 1 2 3 3 3 0 Type III secretion protein YscO SIR2 PF02146.17 ORF67604 - 8.9e-33 113.7 0.0 1.1e-32 113.4 0.0 1.1 1 0 0 1 1 1 1 Sir2 family zf-TFIIB PF13453.6 ORF67604 - 0.00081 18.7 1.8 0.0013 18.0 1.8 1.4 1 0 0 1 1 1 1 Transcription factor zinc-finger PhnA_Zn_Ribbon PF08274.12 ORF67604 - 0.01 15.8 1.4 0.017 15.0 1.4 1.4 1 0 0 1 1 1 0 PhnA Zinc-Ribbon Lar_restr_allev PF14354.6 ORF67604 - 0.054 13.9 1.5 0.12 12.8 1.5 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar Zn_ribbon_SprT PF17283.2 ORF67604 - 0.1 12.5 0.7 0.19 11.7 0.7 1.4 1 0 0 1 1 1 0 SprT-like zinc ribbon domain MT PF12777.7 ORF67604 - 0.12 11.3 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Microtubule-binding stalk of dynein motor Zn_Tnp_IS1595 PF12760.7 ORF67604 - 0.16 12.0 3.6 0.19 11.7 1.5 2.0 2 0 0 2 2 2 0 Transposase zinc-ribbon domain OS-D PF03392.13 ORF67604 - 0.98 9.6 4.3 2.8 8.1 2.9 2.2 1 1 1 2 2 2 0 Insect pheromone-binding family, A10/OS-D OTU PF02338.19 ORF65442 - 0.0012 19.3 0.0 0.0018 18.8 0.0 1.4 1 0 0 1 1 1 1 OTU-like cysteine protease OmpA PF00691.20 ORF63833 - 9.3e-23 80.4 0.1 1.3e-22 80.0 0.1 1.2 1 0 0 1 1 1 1 OmpA family Gly-zipper_Omp PF13488.6 ORF63833 - 2.4e-10 40.2 14.3 2.4e-10 40.2 14.3 1.9 2 0 0 2 2 2 1 Glycine zipper Gly-zipper_YMGG PF13441.6 ORF63833 - 2.9e-08 33.3 16.4 7.7e-08 32.0 16.4 1.8 1 0 0 1 1 1 1 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 ORF63833 - 0.00018 21.3 18.9 0.00018 21.3 18.9 2.0 2 0 0 2 2 2 1 Glycine zipper 2TM domain YtxH PF12732.7 ORF63833 - 0.81 10.3 8.7 8.3 7.0 1.1 2.6 2 0 0 2 2 2 0 YtxH-like protein DUF1269 PF06897.12 ORF63833 - 5.3 7.4 11.0 16 5.9 3.2 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1269) Alpha-amyl_C2 PF07821.12 ORF62020 - 3.4e-17 62.4 0.3 5.8e-17 61.7 0.3 1.4 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain Alpha-amylase PF00128.24 ORF62020 - 0.0061 16.2 0.0 0.0082 15.7 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, catalytic domain THDPS_N_2 PF14805.6 ORF6120 - 0.029 14.6 0.3 0.097 12.9 0.1 2.0 1 1 1 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal ANAPC4 PF12896.7 ORF6120 - 0.076 12.5 0.1 3.3 7.2 0.0 2.2 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 4 EF-hand_like PF09279.11 ORF6120 - 0.17 12.4 2.0 0.18 12.3 0.3 1.9 2 0 0 2 2 2 0 Phosphoinositide-specific phospholipase C, efhand-like TMF_DNA_bd PF12329.8 ORF6120 - 0.58 10.2 7.3 10 6.2 1.3 3.0 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Sec34 PF04136.15 ORF6120 - 0.59 10.0 4.1 2.6 7.9 0.1 2.7 2 1 1 3 3 3 0 Sec34-like family TPR_MLP1_2 PF07926.12 ORF6120 - 2.2 8.4 11.3 2 8.5 7.2 2.6 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein ZapB PF06005.12 ORF6120 - 5 7.6 12.0 0.17 12.4 0.9 2.9 3 0 0 3 3 3 0 Cell division protein ZapB FUSC PF04632.12 ORF6120 - 7.5 5.0 11.2 3.6 6.0 7.1 1.9 1 1 1 2 2 2 0 Fusaric acid resistance protein family YabA PF06156.13 ORF6120 - 9.8 6.9 8.3 9.8 6.9 0.4 2.8 1 1 2 3 3 3 0 Initiation control protein YabA DCP2 PF05026.13 ORF58467 - 0.022 15.1 0.0 0.051 13.9 0.0 1.7 1 0 0 1 1 1 0 Dcp2, box A domain Tad PF13400.6 ORF58467 - 2.5 8.5 11.9 7 7.0 3.2 2.6 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Prominin PF05478.11 ORF57221 - 6.8e-05 21.0 12.7 8.3e-05 20.8 12.7 1.2 1 0 0 1 1 1 1 Prominin DUF3584 PF12128.8 ORF57221 - 9e-05 20.2 22.7 0.0001 20.0 22.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Lebercilin PF15619.6 ORF57221 - 0.0005 19.8 25.2 0.00066 19.4 25.2 1.1 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Syntaxin PF00804.25 ORF57221 - 0.0008 19.1 7.5 0.0008 19.1 7.5 2.1 2 0 0 2 2 2 1 Syntaxin Metal_resist PF13801.6 ORF57221 - 0.0046 17.1 2.2 0.0053 16.9 0.8 1.6 1 1 1 2 2 2 1 Heavy-metal resistance COG5 PF10392.9 ORF57221 - 0.0054 16.9 12.8 0.0067 16.6 12.2 1.5 1 1 0 1 1 1 1 Golgi transport complex subunit 5 TolA_bind_tri PF16331.5 ORF57221 - 0.015 15.4 4.0 0.015 15.4 4.0 3.0 1 1 2 3 3 3 0 TolA binding protein trimerisation TPR_MLP1_2 PF07926.12 ORF57221 - 0.015 15.4 30.8 0.11 12.6 12.6 3.0 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein ATG16 PF08614.11 ORF57221 - 0.021 15.1 21.8 0.027 14.7 21.8 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Corona_S2 PF01601.16 ORF57221 - 0.031 12.8 4.9 0.04 12.4 4.9 1.2 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein bZIP_1 PF00170.21 ORF57221 - 0.036 14.2 1.1 0.036 14.2 1.1 3.4 1 1 1 3 3 3 0 bZIP transcription factor DUF812 PF05667.11 ORF57221 - 0.069 12.0 24.9 0.11 11.4 24.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Dor1 PF04124.12 ORF57221 - 0.07 11.8 13.3 0.056 12.1 12.1 1.5 1 1 0 1 1 1 0 Dor1-like family MCC-bdg_PDZ PF10506.9 ORF57221 - 0.13 12.3 4.2 0.36 10.9 4.2 1.9 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Atg14 PF10186.9 ORF57221 - 0.15 11.1 16.3 0.22 10.5 16.3 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_CLD_2 PF14197.6 ORF57221 - 0.21 11.7 16.2 0.035 14.2 10.9 2.2 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 ZapB PF06005.12 ORF57221 - 0.56 10.7 29.6 0.17 12.4 2.2 3.8 1 1 2 3 3 3 0 Cell division protein ZapB HALZ PF02183.18 ORF57221 - 0.6 10.4 10.6 2 8.7 0.8 3.0 2 1 1 3 3 3 0 Homeobox associated leucine zipper DUF2730 PF10805.8 ORF57221 - 0.63 10.2 9.6 0.074 13.2 3.6 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF2730) bZIP_2 PF07716.15 ORF57221 - 0.74 9.9 13.2 0.61 10.2 0.3 3.1 2 1 1 3 3 3 0 Basic region leucine zipper Taxilin PF09728.9 ORF57221 - 0.87 8.7 32.5 2.4 7.3 32.5 1.6 1 1 0 1 1 1 0 Myosin-like coiled-coil protein ADIP PF11559.8 ORF57221 - 0.89 9.6 27.4 0.023 14.8 14.9 2.3 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding CALCOCO1 PF07888.11 ORF57221 - 1 8.1 25.1 2.9 6.7 25.1 1.5 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like CENP-F_leu_zip PF10473.9 ORF57221 - 1.1 9.3 30.2 0.076 13.0 21.4 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Exonuc_VII_L PF02601.15 ORF57221 - 1.1 8.7 13.5 1.4 8.4 13.5 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit NPV_P10 PF05531.12 ORF57221 - 1.4 9.5 10.4 0.44 11.0 6.6 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF4407 PF14362.6 ORF57221 - 1.7 7.9 16.3 2.7 7.3 16.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PEP-utilisers_N PF05524.13 ORF57221 - 1.8 8.8 13.1 0.53 10.5 7.0 2.2 1 1 1 2 2 2 0 PEP-utilising enzyme, N-terminal Phage_GP20 PF06810.11 ORF57221 - 1.8 8.3 33.6 0.74 9.6 19.2 2.5 1 1 1 2 2 2 0 Phage minor structural protein GP20 Spc7 PF08317.11 ORF57221 - 2.1 7.2 30.7 0.046 12.6 20.3 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Mu-like_Pro PF10123.9 ORF57221 - 2.2 7.7 16.0 2.9 7.4 16.0 1.1 1 0 0 1 1 1 0 Mu-like prophage I protein DUF1664 PF07889.12 ORF57221 - 2.4 8.2 15.7 0.31 11.1 6.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) LPP PF04728.13 ORF57221 - 2.7 8.4 17.3 0.07 13.5 4.6 3.6 1 1 3 4 4 4 0 Lipoprotein leucine-zipper PRKG1_interact PF15898.5 ORF57221 - 2.7 8.9 23.9 0.29 12.1 14.8 2.4 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain YabA PF06156.13 ORF57221 - 2.9 8.6 23.8 0.61 10.7 4.8 3.1 1 1 2 3 3 3 0 Initiation control protein YabA Cluap1 PF10234.9 ORF57221 - 3.4 7.0 20.5 4.9 6.5 20.5 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 Fmp27_WPPW PF10359.9 ORF57221 - 3.9 6.2 24.0 15 4.3 24.1 1.7 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain Asp-B-Hydro_N PF05279.11 ORF57221 - 3.9 7.5 23.1 5.1 7.1 23.1 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region V_ATPase_I PF01496.19 ORF57221 - 4.4 5.1 17.1 6 4.6 17.1 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Rootletin PF15035.6 ORF57221 - 5.3 7.0 25.0 3.1 7.8 18.5 2.0 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion THOC7 PF05615.13 ORF57221 - 5.8 7.2 22.0 7.5 6.8 19.2 2.1 1 1 1 2 2 2 0 Tho complex subunit 7 Seryl_tRNA_N PF02403.22 ORF57221 - 9 6.6 29.1 1 9.6 14.5 2.6 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF4200 PF13863.6 ORF57221 - 9.2 6.7 33.0 0.14 12.6 17.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DivIC PF04977.15 ORF57221 - 9.3 6.1 22.8 0.11 12.2 1.7 3.4 1 1 2 3 3 3 0 Septum formation initiator Fib_alpha PF08702.10 ORF57221 - 9.4 6.4 24.5 1 9.5 3.7 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DASH_Dam1 PF08653.10 ORF57221 - 9.6 6.1 7.8 1.4 8.8 1.5 2.6 2 1 1 3 3 2 0 DASH complex subunit Dam1 RepB PF07506.11 ORF51042 - 0.034 14.2 0.1 0.24 11.4 0.0 2.1 1 1 1 2 2 2 0 RepB plasmid partitioning protein DCP2 PF05026.13 ORF50224 - 0.023 15.0 0.0 0.055 13.8 0.0 1.7 1 0 0 1 1 1 0 Dcp2, box A domain Tad PF13400.6 ORF50224 - 0.81 10.0 12.1 5 7.5 1.6 2.6 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like cNMP_binding PF00027.29 ORF49615 - 1.9e-10 40.7 0.0 2.9e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Presenilin PF01080.17 ORF49268 - 0.091 11.5 2.2 0.096 11.4 2.2 1.3 1 0 0 1 1 1 0 Presenilin SID-1_RNA_chan PF13965.6 ORF49268 - 0.11 10.8 0.9 0.13 10.6 0.9 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 bZIP_Maf PF03131.17 ORF49268 - 0.16 12.5 9.3 0.048 14.2 6.1 1.8 2 0 0 2 2 2 0 bZIP Maf transcription factor Trans_reg_C PF00486.28 ORF45841 - 4.7e-23 81.1 0.2 1.1e-22 79.9 0.1 1.7 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 ORF45841 - 6.1e-22 77.9 0.0 8.3e-22 77.5 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain CAT PF00302.18 ORF45037 - 1e-101 339.0 7.9 1.2e-101 338.9 7.9 1.0 1 0 0 1 1 1 1 Chloramphenicol acetyltransferase 2-oxoacid_dh PF00198.23 ORF45037 - 0.0044 16.5 0.1 1.8 7.9 0.1 2.1 2 0 0 2 2 2 2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Condensation PF00668.20 ORF45037 - 0.037 12.7 0.1 0.11 11.2 0.0 1.8 2 0 0 2 2 2 0 Condensation domain DDE_Tnp_ISL3 PF01610.17 ORF44788 - 0.057 13.1 0.1 0.1 12.3 0.0 1.5 1 1 0 1 1 1 0 Transposase Tra_M PF05261.11 ORF44788 - 0.067 13.2 0.6 0.067 13.2 0.6 1.5 2 0 0 2 2 2 0 TraM protein, DNA-binding DUF3014 PF11219.8 ORF44788 - 0.11 12.8 0.2 15 5.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3014) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks87.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks87.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks87.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks87.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HTH_Tnp_IS630 PF01710.16 ORF44739 - 0.022 14.8 3.8 0.022 14.8 3.8 2.7 1 1 2 3 3 3 0 Transposase FPP PF05911.11 ORF44739 - 0.036 12.3 28.0 0.048 11.9 28.0 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil DUF3450 PF11932.8 ORF44739 - 0.32 10.2 27.8 0.021 14.1 13.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) DUF3584 PF12128.8 ORF44739 - 0.51 7.8 31.4 0.46 7.9 24.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) DUF745 PF05335.13 ORF44739 - 0.61 9.8 19.1 0.16 11.6 15.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) CC2-LZ PF16516.5 ORF44739 - 0.67 10.4 27.2 0.081 13.3 5.5 3.4 1 1 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator APG6_N PF17675.1 ORF44739 - 1.3 9.5 35.1 0.19 12.2 2.9 3.1 1 1 2 3 3 3 0 Apg6 coiled-coil region Lebercilin PF15619.6 ORF44739 - 2.1 7.9 40.0 0.11 12.1 14.3 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Fez1 PF06818.15 ORF44739 - 3.1 8.2 28.4 2 8.8 2.2 2.1 1 1 1 2 2 2 0 Fez1 DHR10 PF18595.1 ORF44739 - 4 7.5 32.2 0.99 9.5 8.5 3.9 1 1 3 4 4 4 0 Designed helical repeat protein 10 domain TraF_2 PF13729.6 ORF44739 - 5 6.4 11.6 0.52 9.6 6.4 1.8 1 1 0 1 1 1 0 F plasmid transfer operon, TraF, protein Striatin PF08232.12 ORF44739 - 8.6 6.9 22.7 1.5 9.4 18.0 2.0 1 1 1 2 2 2 0 Striatin family YscO PF07321.12 ORF44739 - 9.9 6.1 26.8 0.78 9.7 1.3 2.8 1 1 2 3 3 3 0 Type III secretion protein YscO THDPS_N_2 PF14805.6 ORF44411 - 0.029 14.6 0.3 0.097 12.9 0.1 2.0 1 1 1 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal ANAPC4 PF12896.7 ORF44411 - 0.076 12.5 0.1 3.3 7.2 0.0 2.2 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 4 EF-hand_like PF09279.11 ORF44411 - 0.17 12.4 2.0 0.18 12.3 0.3 1.9 2 0 0 2 2 2 0 Phosphoinositide-specific phospholipase C, efhand-like TMF_DNA_bd PF12329.8 ORF44411 - 0.58 10.2 7.3 10 6.2 1.3 3.0 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Sec34 PF04136.15 ORF44411 - 0.59 10.0 4.1 2.6 7.9 0.1 2.7 2 1 1 3 3 3 0 Sec34-like family TPR_MLP1_2 PF07926.12 ORF44411 - 2.2 8.4 11.3 2 8.5 7.2 2.6 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein ZapB PF06005.12 ORF44411 - 5 7.6 12.0 0.17 12.4 0.9 2.9 3 0 0 3 3 3 0 Cell division protein ZapB FUSC PF04632.12 ORF44411 - 7.5 5.0 11.2 3.6 6.0 7.1 1.9 1 1 1 2 2 2 0 Fusaric acid resistance protein family YabA PF06156.13 ORF44411 - 9.8 6.9 8.3 9.8 6.9 0.4 2.8 1 1 2 3 3 3 0 Initiation control protein YabA SIR2 PF02146.17 ORF4376 - 6.9e-33 114.0 0.0 8.6e-33 113.7 0.0 1.1 1 0 0 1 1 1 1 Sir2 family zf-TFIIB PF13453.6 ORF4376 - 0.0013 18.0 1.8 0.0021 17.3 1.8 1.3 1 0 0 1 1 1 1 Transcription factor zinc-finger OS-D PF03392.13 ORF4376 - 0.0054 16.8 1.6 0.06 13.4 0.9 2.4 1 1 1 2 2 2 1 Insect pheromone-binding family, A10/OS-D PhnA_Zn_Ribbon PF08274.12 ORF4376 - 0.0088 16.0 1.8 0.015 15.2 1.8 1.4 1 0 0 1 1 1 1 PhnA Zinc-Ribbon Lar_restr_allev PF14354.6 ORF4376 - 0.066 13.6 1.4 0.14 12.5 1.4 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar MT PF12777.7 ORF4376 - 0.12 11.4 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Microtubule-binding stalk of dynein motor Zn_ribbon_SprT PF17283.2 ORF4376 - 0.18 11.7 0.8 0.32 11.0 0.8 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF4376 - 0.27 11.2 3.3 0.36 10.8 1.3 2.0 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-H2C2_2 PF13465.6 ORF4376 - 1.1 9.9 4.1 9.1 6.9 1.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain Alpha-amyl_C2 PF07821.12 ORF43022 - 3.4e-17 62.4 0.3 5.8e-17 61.7 0.3 1.4 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain Alpha-amylase PF00128.24 ORF43022 - 0.0061 16.2 0.0 0.0082 15.7 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, catalytic domain DUF4203 PF13886.6 ORF4078 - 3.8e-28 98.6 40.8 4.5e-28 98.3 40.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) Patatin PF01734.22 ORF39833 - 1.1e-09 38.7 0.0 1.7e-08 34.9 0.0 2.1 1 1 0 1 1 1 1 Patatin-like phospholipase ABC_export PF16962.5 ORF39530 - 0.1 11.0 1.3 0.14 10.5 1.3 1.1 1 0 0 1 1 1 0 Putative ABC exporter EF-hand_6 PF13405.6 ORF38689 - 0.00012 21.7 2.3 1.2 9.3 0.0 4.0 4 0 0 4 4 4 2 EF-hand domain EF-hand_1 PF00036.32 ORF38689 - 0.00031 20.1 3.6 2.5 7.8 0.0 4.2 4 0 0 4 4 4 2 EF hand EF-hand_8 PF13833.6 ORF38689 - 0.00034 20.4 0.1 1 9.2 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF38689 - 0.00058 20.3 5.1 0.0053 17.2 0.3 3.3 2 2 1 3 3 3 2 EF-hand domain pair DUF4070 PF13282.6 ORF38689 - 0.049 13.7 0.1 0.15 12.2 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4070) CNOT1_TTP_bind PF16417.5 ORF38689 - 0.057 12.6 0.3 0.13 11.4 0.1 1.6 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 1 TTP binding domain SNARE_assoc PF09335.11 ORF38345 - 1.5e-10 41.6 3.9 1.5e-10 41.6 3.9 1.7 2 1 0 2 2 2 1 SNARE associated Golgi protein DUF2975 PF11188.8 ORF38345 - 6.1e-06 26.2 0.5 1.2e-05 25.2 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2975) HECT PF00632.25 ORF38188 - 2.9e-40 138.7 0.1 3.7e-40 138.3 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) YabA PF06156.13 ORF35892 - 0.16 12.6 5.5 0.88 10.2 1.1 2.5 2 1 0 2 2 2 0 Initiation control protein YabA TPR_1 PF00515.28 ORF35052 - 7.1e-17 60.4 12.5 4.7e-05 23.0 1.4 5.1 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF35052 - 7.4e-14 50.7 17.9 0.00027 20.8 1.1 5.5 6 0 0 6 6 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF35052 - 9.7e-14 51.6 8.9 0.00046 20.6 0.2 4.5 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_8 PF13181.6 ORF35052 - 3.8e-13 48.5 13.5 0.00072 19.6 1.0 5.7 6 1 0 6 6 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF35052 - 2e-10 41.1 11.2 0.00023 21.7 0.0 4.4 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 ORF35052 - 7.1e-10 38.4 7.4 2.5e-06 27.1 0.0 3.9 5 0 0 5 5 5 2 TPR repeat TPR_14 PF13428.6 ORF35052 - 1.4e-09 38.0 15.1 0.16 12.9 0.0 5.2 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_7 PF13176.6 ORF35052 - 2.5e-09 36.5 8.0 0.00098 19.0 0.0 5.3 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF35052 - 2e-06 28.0 17.4 0.00087 19.5 4.4 4.3 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.6 ORF35052 - 5.9e-06 26.3 2.3 0.021 15.2 0.2 3.7 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF35052 - 0.00015 22.2 15.7 1.3 9.8 0.0 6.0 5 2 0 5 5 5 2 Tetratricopeptide repeat RPN7 PF10602.9 ORF35052 - 0.0064 16.2 3.0 4.5 7.0 0.0 3.2 2 1 1 3 3 3 1 26S proteasome subunit RPN7 TPR_15 PF13429.6 ORF35052 - 0.02 14.1 5.2 0.072 12.3 0.1 3.2 1 1 2 4 4 4 0 Tetratricopeptide repeat BTAD PF03704.17 ORF35052 - 0.025 15.0 2.5 0.025 15.0 2.5 3.0 3 1 1 4 4 4 0 Bacterial transcriptional activator domain TPR_10 PF13374.6 ORF35052 - 0.064 13.2 8.7 3.8 7.5 0.4 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF3856 PF12968.7 ORF35052 - 0.084 12.9 0.6 0.18 11.9 0.2 1.9 2 1 0 2 2 2 0 Domain of Unknown Function (DUF3856) TPR_9 PF13371.6 ORF35052 - 0.66 10.2 8.7 0.15 12.2 0.5 3.3 3 1 0 4 4 4 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF35052 - 1.2 9.4 10.6 0.62 10.3 4.6 2.8 2 1 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 Pkinase PF00069.25 ORF34166 - 5e-46 157.2 0.0 5.6e-46 157.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF34166 - 8.6e-26 90.8 0.0 9.4e-26 90.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF34166 - 2e-05 23.6 0.0 2.7e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF34166 - 4.4e-05 22.9 0.1 7.3e-05 22.2 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF34166 - 7.3e-05 22.2 0.0 9.2e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF34166 - 0.052 12.5 0.0 0.075 12.0 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Ago_N_1 PF18351.1 ORF32835 - 0.53 10.8 4.2 0.48 10.9 0.8 2.2 2 0 0 2 2 2 0 Fungal Argonaute N-terminal domain KIP1 PF07765.12 ORF30785 - 0.0074 16.4 0.4 0.025 14.7 0.3 1.9 2 0 0 2 2 2 1 KIP1-like protein SopE_GEF PF07487.13 ORF30785 - 0.046 13.8 0.1 0.086 12.9 0.1 1.4 1 0 0 1 1 1 0 SopE GEF domain DUF4304 PF14137.6 ORF30785 - 0.079 13.1 1.3 0.51 10.5 0.4 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4304) V_ATPase_I PF01496.19 ORF30229 - 0.0083 14.1 0.2 0.0098 13.9 0.2 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family CLN3 PF02487.17 ORF30229 - 0.038 13.1 0.2 0.047 12.7 0.2 1.1 1 0 0 1 1 1 0 CLN3 protein SID-1_RNA_chan PF13965.6 ORF30229 - 0.062 11.7 0.8 0.081 11.3 0.8 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Tmemb_9 PF05434.11 ORF30229 - 0.082 12.8 0.2 0.12 12.3 0.2 1.2 1 0 0 1 1 1 0 TMEM9 Grg1 PF11034.8 ORF30229 - 0.26 11.6 2.0 0.65 10.3 1.9 1.8 2 0 0 2 2 2 0 Glucose-repressible protein Grg1 Ank_4 PF13637.6 ORF29506 - 1.9e-11 44.2 0.2 1.2e-05 25.8 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF29506 - 1.9e-07 31.6 0.0 3.7e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF29506 - 2.1e-07 31.0 0.1 0.00016 21.9 0.1 2.9 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF29506 - 1.3e-06 28.5 0.3 0.0002 21.6 0.0 3.1 4 0 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF29506 - 0.00068 19.9 0.1 0.018 15.5 0.0 3.0 3 0 0 3 3 3 1 Ankyrin repeat RE_XamI PF09572.10 ORF29506 - 0.17 11.5 0.4 0.2 11.3 0.4 1.1 1 0 0 1 1 1 0 XamI restriction endonuclease CBP_BcsF PF11120.8 ORF2613 - 0.71 10.0 3.9 1.8 8.8 3.9 1.7 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF Paramecium_SA PF01508.16 ORF2101 - 0.93 10.0 23.1 0.9 10.0 0.2 3.9 4 0 0 4 4 4 0 Paramecium surface antigen domain DUF812 PF05667.11 ORF20431 - 0.0021 17.0 25.7 0.0026 16.7 25.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Troponin PF00992.20 ORF20431 - 0.014 15.7 5.9 0.014 15.7 5.9 3.7 1 1 2 3 3 3 0 Troponin FAM76 PF16046.5 ORF20431 - 0.015 14.7 22.0 0.0072 15.7 18.5 2.1 1 1 1 2 2 2 0 FAM76 protein DUF3450 PF11932.8 ORF20431 - 0.025 13.9 22.9 0.034 13.5 7.3 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DYW_deaminase PF14432.6 ORF20431 - 0.03 14.2 0.8 0.03 14.2 0.8 1.8 2 0 0 2 2 2 0 DYW family of nucleic acid deaminases CREPT PF16566.5 ORF20431 - 0.031 14.4 17.4 0.12 12.5 4.3 2.5 1 1 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour HsbA PF12296.8 ORF20431 - 0.047 14.1 6.3 2.8 8.4 0.8 2.4 1 1 1 2 2 2 0 Hydrophobic surface binding protein A Taxilin PF09728.9 ORF20431 - 0.06 12.5 26.5 0.015 14.5 20.1 2.2 1 1 1 2 2 2 0 Myosin-like coiled-coil protein Lebercilin PF15619.6 ORF20431 - 0.073 12.7 29.0 0.026 14.2 11.7 2.2 2 0 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Fib_alpha PF08702.10 ORF20431 - 0.076 13.2 21.6 1 9.6 7.1 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family KfrA_N PF11740.8 ORF20431 - 0.31 11.7 9.6 0.68 10.6 0.8 2.7 2 1 0 2 2 2 0 Plasmid replication region DNA-binding N-term TPR_MLP1_2 PF07926.12 ORF20431 - 0.62 10.1 23.3 0.081 13.0 7.4 2.7 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein MbeD_MobD PF04899.12 ORF20431 - 0.69 10.1 6.8 0.21 11.7 2.4 2.5 2 2 0 2 2 2 0 MbeD/MobD like Prominin PF05478.11 ORF20431 - 0.81 7.6 13.3 0.14 10.1 9.5 1.5 1 1 0 1 1 1 0 Prominin DUF1664 PF07889.12 ORF20431 - 0.88 9.6 13.4 0.13 12.3 3.4 3.0 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Golgin_A5 PF09787.9 ORF20431 - 1.1 8.7 29.2 0.82 9.1 13.8 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 Pox_A_type_inc PF04508.12 ORF20431 - 1.4 8.9 6.3 16 5.6 0.3 4.3 4 0 0 4 4 4 0 Viral A-type inclusion protein repeat Baculo_PEP_C PF04513.12 ORF20431 - 1.9 8.6 16.9 0.26 11.3 5.4 2.6 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus WXG100 PF06013.12 ORF20431 - 2.3 8.5 9.5 4 7.7 2.2 3.9 2 2 1 3 3 3 0 Proteins of 100 residues with WXG ATG16 PF08614.11 ORF20431 - 2.5 8.3 26.9 0.91 9.7 16.4 2.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF641 PF04859.12 ORF20431 - 2.6 8.4 18.2 0.17 12.2 3.4 3.1 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) DUF4407 PF14362.6 ORF20431 - 4 6.7 20.2 9.2 5.5 20.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3552 PF12072.8 ORF20431 - 5.7 6.3 23.1 0.031 13.7 11.5 2.5 1 1 2 3 3 3 0 Domain of unknown function (DUF3552) HIP1_clath_bdg PF16515.5 ORF20431 - 5.9 7.6 26.3 0.051 14.2 7.2 3.3 1 1 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF2203 PF09969.9 ORF20431 - 6.4 7.5 15.7 12 6.6 3.5 2.5 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF4200 PF13863.6 ORF20431 - 8.4 6.8 31.2 0.056 13.8 8.4 3.5 1 1 3 4 4 4 0 Domain of unknown function (DUF4200) LMBR1 PF04791.16 ORF20431 - 8.9 5.1 11.8 11 4.7 11.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Bacillus_HBL PF05791.11 ORF20431 - 9.9 6.0 20.4 0.078 12.8 6.0 2.6 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) TPR_1 PF00515.28 ORF19581 - 2.9e-20 71.2 16.3 6.7e-06 25.7 0.1 7.3 6 2 0 6 6 6 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF19581 - 1.8e-19 68.2 5.7 0.00026 20.9 0.0 7.1 6 1 0 6 6 6 4 Tetratricopeptide repeat TPR_17 PF13431.6 ORF19581 - 4.7e-17 61.1 7.1 0.002 18.4 0.1 5.3 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF19581 - 6.2e-17 61.0 6.4 0.00087 18.9 0.0 5.3 2 2 3 5 5 5 4 TPR repeat TPR_19 PF14559.6 ORF19581 - 1.1e-14 54.7 2.3 0.013 16.0 0.0 4.9 1 1 4 5 5 5 4 Tetratricopeptide repeat TPR_7 PF13176.6 ORF19581 - 1.8e-14 52.6 0.4 0.0089 16.0 0.0 5.4 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF19581 - 6.6e-13 48.7 4.8 8e-06 26.1 0.1 5.2 1 1 4 5 5 5 3 Tetratricopeptide repeat TPR_6 PF13174.6 ORF19581 - 1.6e-10 40.9 0.9 0.35 11.6 0.0 5.1 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF19581 - 1.5e-09 37.4 2.9 0.0098 15.7 0.1 6.1 6 1 0 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF19581 - 3.4e-09 36.7 0.0 1.1 10.3 0.0 5.0 3 2 2 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF19581 - 3.4e-08 33.1 16.3 0.011 15.8 0.1 5.5 7 0 0 7 7 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF19581 - 4e-07 30.2 5.8 0.043 14.0 0.1 3.1 1 1 2 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 Coatomer_E PF04733.14 ORF19581 - 4.2e-07 29.7 4.6 0.005 16.3 0.4 2.9 1 1 1 2 2 2 2 Coatomer epsilon subunit TPR_16 PF13432.6 ORF19581 - 1.1e-05 26.0 0.0 0.32 11.7 0.0 3.5 1 1 3 4 4 4 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF19581 - 7.4e-05 22.7 5.6 0.79 9.8 0.1 4.5 2 2 3 5 5 5 2 Fis1 C-terminal tetratricopeptide repeat MIT PF04212.18 ORF19581 - 0.00015 21.8 4.5 0.079 13.0 0.1 4.3 3 1 0 4 4 4 1 MIT (microtubule interacting and transport) domain TPR_MalT PF17874.1 ORF19581 - 0.0044 16.4 0.0 0.92 8.8 0.0 2.3 2 1 0 2 2 2 1 MalT-like TPR region Sel1 PF08238.12 ORF19581 - 0.0056 17.3 0.3 62 4.5 0.0 4.0 4 0 0 4 4 4 0 Sel1 repeat TPR_21 PF09976.9 ORF19581 - 0.067 12.9 1.4 0.3 10.8 0.5 2.2 2 1 0 2 2 2 0 Tetratricopeptide repeat-like domain TPR_9 PF13371.6 ORF19581 - 0.076 13.2 0.0 1.5 9.1 0.0 2.5 2 1 1 3 3 3 0 Tetratricopeptide repeat DCP2 PF05026.13 ORF18907 - 0.022 15.1 0.0 0.051 13.9 0.0 1.7 1 0 0 1 1 1 0 Dcp2, box A domain Tad PF13400.6 ORF18907 - 2.5 8.5 11.9 7 7.0 3.2 2.6 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like RepB PF07506.11 ORF17276 - 0.034 14.2 0.1 0.24 11.4 0.0 2.1 1 1 1 2 2 2 0 RepB plasmid partitioning protein MORN PF02493.20 ORF1641 - 7.6e-07 28.7 10.7 0.0003 20.5 0.1 4.3 4 0 0 4 4 4 2 MORN repeat DIX PF00778.17 ORF1641 - 0.35 10.8 3.9 0.35 10.7 1.9 2.0 2 0 0 2 2 2 0 DIX domain PPR_2 PF13041.6 ORF15716 - 2.4e-20 72.5 0.0 5.1e-07 29.8 0.0 4.4 1 1 4 5 5 5 5 PPR repeat family PPR_3 PF13812.6 ORF15716 - 1.6e-16 60.1 0.0 2.4e-06 27.5 0.0 3.8 2 1 3 5 5 5 3 Pentatricopeptide repeat domain PPR PF01535.20 ORF15716 - 2.2e-16 58.9 0.7 0.006 16.7 0.0 5.8 6 0 0 6 6 6 4 PPR repeat PPR_long PF17177.4 ORF15716 - 3.3e-10 39.7 0.8 4.5e-06 26.2 0.1 2.2 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF15716 - 5.5e-06 26.0 0.5 2.4 7.9 0.0 5.6 8 1 0 8 8 8 2 PPR repeat SNAP PF14938.6 ORF15716 - 0.0025 17.3 1.0 0.97 8.8 0.2 2.3 2 0 0 2 2 2 2 Soluble NSF attachment protein, SNAP TPR_7 PF13176.6 ORF15716 - 0.0059 16.6 0.3 27 5.1 0.0 4.1 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF15716 - 0.015 16.1 2.5 16 6.6 0.0 3.9 2 1 1 3 3 3 0 Tetratricopeptide repeat HemY_N PF07219.13 ORF15716 - 0.031 14.5 0.1 0.073 13.3 0.1 1.6 1 0 0 1 1 1 0 HemY protein N-terminus DUF3322 PF11795.8 ORF15716 - 0.032 14.2 1.4 1.4 8.9 0.1 2.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) DCP2 PF05026.13 ORF13902 - 0.022 15.1 0.0 0.051 13.9 0.0 1.7 1 0 0 1 1 1 0 Dcp2, box A domain Tad PF13400.6 ORF13902 - 2.5 8.5 11.9 7 7.0 3.2 2.6 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Rubis-subs-bind PF09273.11 ORF12309 - 0.0023 18.6 2.0 0.0025 18.5 0.5 1.8 2 0 0 2 2 2 1 Rubisco LSMT substrate-binding DUF1397 PF07165.11 ORF12309 - 0.013 14.9 0.1 0.019 14.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1397) N1221 PF07923.13 ORF12309 - 0.061 12.5 0.0 0.081 12.1 0.0 1.1 1 0 0 1 1 1 0 N1221-like protein HTH_Tnp_IS630 PF01710.16 ORF111963 - 0.022 14.8 3.8 0.022 14.8 3.8 2.7 1 1 2 3 3 3 0 Transposase FPP PF05911.11 ORF111963 - 0.036 12.3 28.0 0.048 11.9 28.0 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil DUF3450 PF11932.8 ORF111963 - 0.32 10.2 27.8 0.021 14.1 13.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) DUF3584 PF12128.8 ORF111963 - 0.51 7.8 31.4 0.46 7.9 24.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) DUF745 PF05335.13 ORF111963 - 0.61 9.8 19.1 0.16 11.6 15.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) CC2-LZ PF16516.5 ORF111963 - 0.67 10.4 27.2 0.081 13.3 5.5 3.4 1 1 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator APG6_N PF17675.1 ORF111963 - 1.3 9.5 35.1 0.19 12.2 2.9 3.1 1 1 2 3 3 3 0 Apg6 coiled-coil region Lebercilin PF15619.6 ORF111963 - 2.1 7.9 40.0 0.11 12.1 14.3 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Fez1 PF06818.15 ORF111963 - 3.1 8.2 28.4 2 8.8 2.2 2.1 1 1 1 2 2 2 0 Fez1 DHR10 PF18595.1 ORF111963 - 4 7.5 32.2 0.99 9.5 8.5 3.9 1 1 3 4 4 4 0 Designed helical repeat protein 10 domain TraF_2 PF13729.6 ORF111963 - 5 6.4 11.6 0.52 9.6 6.4 1.8 1 1 0 1 1 1 0 F plasmid transfer operon, TraF, protein Striatin PF08232.12 ORF111963 - 8.6 6.9 22.7 1.5 9.4 18.0 2.0 1 1 1 2 2 2 0 Striatin family YscO PF07321.12 ORF111963 - 9.9 6.1 26.8 0.78 9.7 1.3 2.8 1 1 2 3 3 3 0 Type III secretion protein YscO MORN PF02493.20 ORF111730 - 7.6e-07 28.7 10.7 0.0003 20.5 0.1 4.3 4 0 0 4 4 4 2 MORN repeat DIX PF00778.17 ORF111730 - 0.35 10.8 3.9 0.35 10.7 1.9 2.0 2 0 0 2 2 2 0 DIX domain UCH PF00443.29 ORF109671 - 2e-22 80.0 2.8 2.1e-22 79.9 2.8 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF109671 - 6.7e-07 29.2 4.3 2.6e-06 27.3 4.3 1.8 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Peptidase_C98 PF15499.6 ORF109671 - 0.11 11.9 3.0 0.23 10.9 3.0 1.7 1 1 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase DUF777 PF05606.11 ORF10905 - 0.027 14.2 0.1 0.044 13.5 0.1 1.4 1 1 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF777) Acyl-CoA_dh_M PF02770.19 ORF10905 - 0.13 12.5 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain CH_2 PF06294.11 ORF108378 - 2.3e-32 111.0 0.3 2.3e-32 111.0 0.3 1.8 2 0 0 2 2 2 1 CH-like domain in sperm protein CAMSAP_CH PF11971.8 ORF108378 - 2.9e-17 62.3 0.1 2.9e-17 62.3 0.1 1.9 3 0 0 3 3 3 1 CAMSAP CH domain PKcGMP_CC PF16808.5 ORF108378 - 0.00025 20.9 5.1 0.047 13.5 0.1 2.9 2 0 0 2 2 2 2 Coiled-coil N-terminus of cGMP-dependent protein kinase CH PF00307.31 ORF108378 - 0.0012 19.0 1.0 0.0025 18.0 0.1 2.0 2 0 0 2 2 2 1 Calponin homology (CH) domain DUF641 PF04859.12 ORF108378 - 0.013 15.9 4.9 0.013 15.9 4.9 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) ABC_tran_CTD PF16326.5 ORF108378 - 0.068 13.4 3.2 12 6.3 3.4 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain Fib_alpha PF08702.10 ORF108378 - 0.33 11.1 9.8 0.22 11.7 7.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF108378 - 1.8 9.1 8.8 0.89 10.1 5.6 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 TMF_DNA_bd PF12329.8 ORF108378 - 2.3 8.3 14.5 0.64 10.1 9.1 2.7 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF1664 PF07889.12 ORF108378 - 4.1 7.5 7.2 1.4 8.9 2.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Acetyltransf_7 PF13508.7 ORF106243 - 6.6e-05 23.3 0.0 0.00011 22.5 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF106243 - 7.7e-05 22.9 0.0 0.00012 22.3 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF106243 - 0.00063 19.7 0.0 0.0011 18.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF106243 - 0.002 18.2 0.1 0.0051 16.9 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain RsgA_GTPase PF03193.16 ORF105510 - 2.6e-36 125.1 0.0 3.7e-36 124.6 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF105510 - 1.6e-05 24.9 0.0 2.9e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF105510 - 2.5e-05 23.8 0.1 0.16 11.5 0.1 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF105510 - 5.6e-05 22.8 0.0 0.022 14.3 0.1 2.5 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain Ras PF00071.22 ORF105510 - 6.8e-05 22.5 0.2 0.15 11.7 0.0 2.2 2 0 0 2 2 2 2 Ras family Arf PF00025.21 ORF105510 - 0.0031 17.0 0.3 0.013 15.0 0.1 2.0 2 1 1 3 3 3 1 ADP-ribosylation factor family PduV-EutP PF10662.9 ORF105510 - 0.0048 16.7 0.1 0.98 9.2 0.0 2.3 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 ORF105510 - 0.017 15.4 0.5 0.16 12.2 0.1 2.5 3 0 0 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 ORF105510 - 0.018 15.6 0.1 0.032 14.8 0.1 1.4 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 ORF105510 - 0.02 14.6 0.0 0.043 13.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF105510 - 0.021 15.2 1.1 0.06 13.7 0.1 2.0 2 0 0 2 2 2 0 AAA ATPase domain MMR_HSR1_Xtn PF16897.5 ORF105510 - 0.049 13.6 0.0 0.087 12.9 0.0 1.3 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain cobW PF02492.19 ORF105510 - 0.061 12.9 0.8 6.4 6.3 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.17 ORF105510 - 0.065 13.0 0.1 4.8 6.9 0.0 2.9 2 1 0 3 3 3 0 Conserved hypothetical ATP binding protein IstB_IS21 PF01695.17 ORF105510 - 0.069 12.9 0.1 0.12 12.1 0.1 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Septin PF00735.18 ORF105510 - 0.089 12.1 0.1 1.6 7.9 0.0 2.1 2 0 0 2 2 2 0 Septin SfsA_N PF17746.1 ORF105510 - 0.11 12.6 0.0 0.28 11.4 0.0 1.6 1 0 0 1 1 1 0 SfsA N-terminal OB domain AAA_22 PF13401.6 ORF105510 - 0.12 12.6 0.7 0.5 10.7 0.1 2.0 2 0 0 2 2 2 0 AAA domain CTP_synth_N PF06418.14 ORF105239 - 1e-66 225.0 1.5 1.5e-66 224.4 1.5 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus CbiA PF01656.23 ORF105239 - 0.0014 18.6 0.0 0.0025 17.9 0.0 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain CagY_M PF07337.11 ORF104385 - 0.26 10.9 1.9 0.5 10.0 0.1 2.2 2 0 0 2 2 2 0 DC-EC Repeat HlyIII PF03006.20 ORF103291 - 2.2e-37 128.9 20.5 2.6e-37 128.7 20.5 1.0 1 0 0 1 1 1 1 Haemolysin-III related CD52 PF15116.6 ORF103291 - 7.3 6.7 8.1 0.17 12.0 0.6 2.1 3 0 0 3 3 3 0 CAMPATH-1 antigen PUF PF00806.19 ORF103134 - 7.6e-12 44.2 0.4 9.4e-06 25.0 0.1 2.6 2 0 0 2 2 2 2 Pumilio-family RNA binding repeat Voltage_CLC PF00654.20 ORF102784 - 0.01 15.1 9.2 0.013 14.7 9.2 1.1 1 0 0 1 1 1 0 Voltage gated chloride channel Peptidase_M16 PF00675.20 NODE_33309_length_652_cov_30.696921_g26518_i0forward_frame_1 - 0.039 13.9 0.4 3.7 7.5 0.1 2.4 1 1 1 2 2 2 0 Insulinase (Peptidase family M16) Aminotran_3 PF00202.21 NODE_33309_length_652_cov_30.696921_g26518_i0forward_frame_1 - 0.13 10.9 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-III DUF2701 PF10857.8 NODE_33306_length_652_cov_84.583468_g26515_i0reverse_frame_1 - 0.45 10.6 4.9 0.28 11.2 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2701) Acyl_transf_3 PF01757.22 NODE_33306_length_652_cov_84.583468_g26515_i0forward_frame_1 - 3.5e-07 29.6 10.9 4.6e-07 29.2 10.9 1.1 1 0 0 1 1 1 1 Acyltransferase family DUF2207 PF09972.9 NODE_33306_length_652_cov_84.583468_g26515_i0forward_frame_1 - 2.9 6.6 5.9 5 5.8 5.9 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) PARP PF00644.20 NODE_33296_length_652_cov_136.538088_g26506_i0forward_frame_1 - 5.3e-05 22.9 4.3 0.002 17.8 0.5 2.2 1 1 1 2 2 2 2 Poly(ADP-ribose) polymerase catalytic domain Rep_Org_C PF06926.11 NODE_33280_length_652_cov_374.165316_g26491_i0reverse_frame_1 - 0.042 14.1 2.4 0.093 13.1 0.3 2.4 1 1 1 2 2 2 0 Putative replisome organiser protein C-terminus DUF4131 PF13567.6 NODE_33280_length_652_cov_374.165316_g26491_i0forward_frame_1 - 0.12 12.1 3.6 0.17 11.6 3.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) TrmO PF01980.16 NODE_33250_length_653_cov_195.574434_g26464_i0forward_frame_1 - 0.025 14.8 0.0 0.047 13.9 0.0 1.5 1 0 0 1 1 1 0 tRNA-methyltransferase O DUF4757 PF15949.5 NODE_33207_length_654_cov_96.229402_g26428_i0reverse_frame_1 - 2.8 8.4 12.9 22 5.5 12.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4757) RNA_polI_A34 PF08208.11 NODE_33169_length_655_cov_8.177419_g26394_i0reverse_frame_2 - 1.4 8.9 24.2 1.8 8.6 24.2 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 PBP_sp32 PF07222.12 NODE_33169_length_655_cov_8.177419_g26394_i0reverse_frame_2 - 1.8 7.9 6.4 2.6 7.4 5.8 1.5 1 1 0 1 1 1 0 Proacrosin binding protein sp32 DUF4136 PF13590.6 NODE_33165_length_655_cov_59.829032_g26390_i0reverse_frame_2 - 0.054 14.1 0.5 0.1 13.2 0.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4136) CPT PF07931.12 NODE_33161_length_655_cov_80.025806_g26386_i0reverse_frame_3 - 0.051 13.4 0.1 0.077 12.8 0.1 1.3 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein ChapFlgA_N PF17656.1 NODE_33161_length_655_cov_80.025806_g26386_i0reverse_frame_2 - 0.14 12.4 0.5 0.26 11.5 0.5 1.4 1 0 0 1 1 1 0 FlgA N-terminal domain FmiP_Thoc5 PF09766.9 NODE_33161_length_655_cov_80.025806_g26386_i0forward_frame_3 - 0.052 12.8 0.0 0.069 12.4 0.0 1.1 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 SWIM PF04434.17 NODE_33161_length_655_cov_80.025806_g26386_i0forward_frame_2 - 0.12 12.1 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 SWIM zinc finger LRR_6 PF13516.6 NODE_33138_length_655_cov_333.559677_g26365_i0reverse_frame_3 - 0.0026 17.7 9.3 15 6.0 0.1 6.1 6 1 0 6 6 6 2 Leucine Rich repeat LRR_1 PF00560.33 NODE_33138_length_655_cov_333.559677_g26365_i0reverse_frame_3 - 0.057 14.0 1.2 4.5 8.2 0.2 3.2 2 0 0 2 2 2 0 Leucine Rich Repeat CCT_2 PF09425.10 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_3 - 7.8 6.5 10.5 0.1 12.5 2.8 1.9 2 0 0 2 2 2 0 Divergent CCT motif Cyclin_C PF02984.19 NODE_33121_length_656_cov_2.776167_g26351_i0reverse_frame_3 - 6e-08 32.8 0.8 1.2e-07 31.8 0.8 1.6 1 0 0 1 1 1 1 Cyclin, C-terminal domain DUF5436 PF17504.2 NODE_33121_length_656_cov_2.776167_g26351_i0reverse_frame_3 - 2.2 8.7 5.4 9.4 6.6 0.3 3.0 2 1 1 3 3 3 0 Family of unknown function (DUF5436) Cyclin_N PF00134.23 NODE_33121_length_656_cov_2.776167_g26351_i0reverse_frame_2 - 2.5e-20 72.5 0.0 4.9e-20 71.6 0.0 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain UL45 PF05473.12 NODE_33119_length_656_cov_3.252818_g26349_i0reverse_frame_2 - 0.025 14.2 0.0 4.9 6.7 0.0 2.2 2 0 0 2 2 2 0 UL45 protein, carbohydrate-binding C-type lectin-like Fe-ADH_2 PF13685.6 NODE_33102_length_656_cov_265.256039_g26332_i0reverse_frame_3 - 0.29 10.8 1.2 0.36 10.5 1.2 1.2 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase ABC-3 PF00950.17 NODE_33081_length_657_cov_3.247588_g26317_i0reverse_frame_2 - 7.2e-23 81.4 5.3 8.8e-23 81.1 5.3 1.1 1 0 0 1 1 1 1 ABC 3 transport family YndJ PF14158.6 NODE_33081_length_657_cov_3.247588_g26317_i0reverse_frame_2 - 0.01 15.2 1.3 0.013 14.9 1.3 1.3 1 0 0 1 1 1 0 YndJ-like protein RuvB_C PF05491.13 NODE_33081_length_657_cov_3.247588_g26317_i0forward_frame_3 - 3.2e-19 68.6 0.0 4.9e-19 68.0 0.0 1.3 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain KRAP_IP3R_bind PF14722.6 NODE_33066_length_657_cov_110.799035_g26302_i0reverse_frame_2 - 0.17 11.6 0.7 10 5.8 0.1 2.2 1 1 1 2 2 2 0 Ki-ras-induced actin-interacting protein-IP3R-interacting domain TMEM239 PF15841.5 NODE_33066_length_657_cov_110.799035_g26302_i0forward_frame_2 - 0.36 10.7 3.6 0.21 11.5 0.1 2.1 2 1 1 3 3 3 0 Transmembrane protein 239 family Xol-1_GHMP-like PF09109.10 NODE_33058_length_657_cov_170.950161_g26295_i0forward_frame_2 - 0.014 15.3 2.3 0.024 14.5 2.3 1.3 1 1 0 1 1 1 0 Switch protein XOL-1, GHMP-like Tau95 PF09734.9 ORF99519 - 5.4e-17 62.9 0.1 8e-17 62.4 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain Tau95 PF09734.9 ORF97946 - 5.4e-17 62.9 0.1 8e-17 62.4 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain DUF4191 PF13829.6 ORF95962 - 4.8 6.5 10.1 0.25 10.7 2.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) Chitin_synth_2 PF03142.15 ORF93036 - 6e-13 48.2 0.0 3e-12 45.9 0.0 1.9 2 0 0 2 2 2 1 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF93036 - 0.0018 18.2 0.0 0.0032 17.4 0.0 1.4 2 0 0 2 2 2 1 Glycosyl transferase family group 2 peroxidase PF00141.23 ORF89315 - 1.1e-30 107.1 0.0 1.3e-30 106.8 0.0 1.0 1 0 0 1 1 1 1 Peroxidase Bax1-I PF01027.20 ORF89287 - 3.8e-18 66.1 11.1 4.4e-18 65.9 11.1 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 VIT1 PF01988.19 ORF89287 - 0.029 14.2 0.0 0.037 13.9 0.0 1.2 1 0 0 1 1 1 0 VIT family DUF1461 PF07314.11 ORF89287 - 0.31 10.9 5.2 8.5 6.2 5.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1461) Fer4_5 PF12801.7 ORF87963 - 6e-16 58.1 8.1 1.3e-12 47.4 0.3 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4 PF00037.27 ORF87963 - 6.4e-08 32.1 19.2 0.0058 16.4 1.7 4.2 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_10 PF13237.6 ORF87963 - 3.6e-07 30.2 13.9 4.1e-07 30.0 10.7 2.5 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF87963 - 8.1e-07 29.1 24.6 0.00019 21.5 14.1 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF87963 - 1.3e-06 28.9 15.2 0.00085 19.9 14.7 3.0 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF87963 - 2.6e-06 27.3 22.4 4.8e-05 23.3 2.9 4.0 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 ORF87963 - 7.5e-06 26.8 10.9 0.043 14.7 0.8 4.0 4 0 0 4 4 4 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 ORF87963 - 5.7e-05 23.2 9.0 5.7e-05 23.2 9.0 3.1 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF87963 - 0.0062 16.6 26.8 0.0087 16.1 3.5 3.6 4 0 0 4 4 3 2 4Fe-4S binding domain Ni_hydr_CYTB PF01292.20 ORF87963 - 0.022 14.4 1.9 0.033 13.8 1.9 1.2 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 Cdd1 PF11731.8 ORF87963 - 0.025 14.8 0.0 0.043 14.1 0.0 1.3 1 0 0 1 1 1 0 Pathogenicity locus Fer4_3 PF12798.7 ORF87963 - 0.094 13.7 28.6 1 10.4 4.9 4.2 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_8 PF13183.6 ORF87963 - 0.35 11.3 21.8 0.75 10.3 16.0 3.3 3 1 1 4 4 4 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF87963 - 0.37 11.4 20.5 0.22 12.1 2.8 3.4 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_17 PF13534.6 ORF87963 - 1 9.9 18.2 23 5.6 4.2 3.2 3 1 1 4 4 4 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 ORF87963 - 4.8 7.4 17.8 4 7.7 12.1 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 ORF87963 - 9.1 7.1 12.3 5.2 7.9 2.2 2.7 3 0 0 3 3 3 0 4Fe-4S single cluster domain UPF0220 PF05255.11 ORF86154 - 0.23 11.0 1.1 0.33 10.5 1.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) TFIIA PF03153.13 ORF86154 - 1.1 9.2 7.5 1.4 8.9 7.5 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Fer4_7 PF12838.7 ORF85417 - 7.8e-13 48.8 23.6 1.2e-05 25.8 7.5 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF85417 - 1.7e-12 47.3 18.0 1.4e-06 28.4 1.9 2.9 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF85417 - 1.7e-12 48.1 17.5 0.00018 22.4 0.8 4.4 4 1 0 4 4 4 4 4Fe-4S double cluster binding domain Fer4 PF00037.27 ORF85417 - 8.7e-12 44.3 36.5 4.1e-09 35.9 1.6 5.3 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_6 PF12837.7 ORF85417 - 1.9e-09 37.2 35.6 2.3e-06 27.5 1.5 4.6 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_10 PF13237.6 ORF85417 - 5e-09 36.1 24.4 0.00058 19.9 8.5 4.1 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF85417 - 2.5e-08 34.3 43.8 0.0091 16.9 6.4 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_21 PF14697.6 ORF85417 - 6.6e-08 32.6 27.1 0.0001 22.3 12.7 3.9 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_11 PF13247.6 ORF85417 - 2.4e-07 30.8 15.1 5.1e-07 29.7 4.7 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF85417 - 1.9e-06 27.6 34.1 0.00042 20.3 1.2 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_4 PF12800.7 ORF85417 - 1.6e-05 25.1 26.9 0.025 15.1 1.9 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 ORF85417 - 4.7e-05 23.7 20.7 0.01 16.3 3.8 2.9 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF85417 - 0.0008 19.9 23.8 0.052 14.1 0.9 4.3 2 1 3 5 5 5 4 4Fe-4S dicluster domain Fer4_15 PF13459.6 ORF85417 - 0.032 14.9 16.5 0.32 11.8 0.1 4.1 3 1 0 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 ORF85417 - 0.48 11.0 21.8 0.91 10.1 0.9 3.6 3 1 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 ORF85417 - 5.7 7.1 8.8 1.2 9.3 4.0 2.2 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S SIKE PF05769.11 ORF84164 - 0.011 15.7 1.2 0.061 13.3 0.8 1.9 1 1 1 2 2 2 0 SIKE family NEMO PF11577.8 ORF84164 - 0.044 13.8 0.1 0.16 12.0 0.1 1.9 1 1 1 2 2 2 0 NF-kappa-B essential modulator NEMO KLRAQ PF10205.9 ORF84164 - 0.12 12.7 0.2 0.24 11.7 0.2 1.5 1 1 0 1 1 1 0 Predicted coiled-coil domain-containing protein Ras PF00071.22 ORF84111 - 1.4e-50 171.0 0.0 1.9e-50 170.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF84111 - 5.3e-31 107.3 0.0 1.3e-30 106.1 0.0 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF84111 - 8e-11 41.7 0.0 1.2e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF84111 - 1.1e-06 28.2 0.0 1.7e-06 27.6 0.0 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF84111 - 2.2e-06 27.4 0.1 6e-06 25.9 0.0 1.6 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF84111 - 0.00014 21.4 0.1 0.3 10.5 0.1 2.1 1 1 1 2 2 2 2 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 ORF84111 - 0.00024 21.1 0.0 0.00043 20.3 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF4623 PF15416.6 ORF84111 - 0.017 13.7 0.0 0.02 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4623) AAA_7 PF12775.7 ORF84111 - 0.022 14.3 0.0 0.052 13.1 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region TniB PF05621.11 ORF84111 - 0.065 12.6 0.0 0.68 9.3 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_24 PF13479.6 ORF84111 - 0.16 11.7 0.2 0.33 10.6 0.0 1.6 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF84111 - 0.18 12.2 0.0 0.28 11.5 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain YrhC PF14143.6 ORF83509 - 0.0057 16.7 0.4 0.055 13.6 0.0 2.2 2 0 0 2 2 2 1 YrhC-like protein DUF2615 PF11027.8 ORF83509 - 0.022 14.9 0.7 0.036 14.2 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2615) NfeD PF01957.18 ORF83509 - 0.064 13.6 0.4 11 6.4 0.1 2.5 3 0 0 3 3 3 0 NfeD-like C-terminal, partner-binding 7tm_1 PF00001.21 ORF83509 - 0.1 11.9 1.3 0.58 9.4 0.1 2.0 1 1 0 2 2 2 0 7 transmembrane receptor (rhodopsin family) TNFR_16_TM PF18422.1 ORF83279 - 0.12 12.4 0.9 0.18 11.8 0.9 1.2 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain SKG6 PF08693.10 ORF83279 - 0.91 9.0 3.2 1.9 7.9 3.2 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain CBS PF00571.28 ORF82360 - 5.4e-06 26.8 0.0 0.08 13.4 0.0 2.5 2 0 0 2 2 2 2 CBS domain DUF4925 PF16272.5 ORF82360 - 0.1 12.1 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4925) Med31 PF05669.12 ORF80234 - 5.5e-17 61.6 0.0 8e-17 61.0 0.0 1.2 1 0 0 1 1 1 1 SOH1 Tcp10_C PF07202.13 ORF79867 - 6.4e-44 150.0 4.4 1.1e-43 149.2 2.7 2.1 1 1 1 2 2 2 1 T-complex protein 10 C-terminus Cuticle_1 PF08140.11 ORF79867 - 0.0022 18.0 1.0 2.8 8.0 0.1 4.5 4 1 1 5 5 5 1 Crustacean cuticle protein repeat POLO_box PF00659.18 ORF79867 - 0.006 16.8 0.4 0.11 12.7 0.0 2.6 1 1 1 2 2 2 1 POLO box duplicated region Lipoprotein_15 PF03640.15 ORF79867 - 0.009 15.5 1.8 2.6 7.6 0.1 2.7 1 1 1 2 2 2 2 Secreted repeat of unknown function DUF559 PF04480.12 ORF79867 - 0.013 15.3 0.1 0.61 10.0 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF559) TGT_C2 PF14810.6 ORF79867 - 0.019 15.0 0.1 4.2 7.6 0.0 3.0 2 1 0 2 2 2 0 Patch-forming domain C2 of tRNA-guanine transglycosylase PD40 PF07676.12 ORF79867 - 0.11 12.5 2.8 1.1 9.2 0.0 3.9 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat FAM194 PF14977.6 ORF79867 - 0.12 11.7 1.0 17 4.6 0.0 3.1 3 2 0 3 3 3 0 FAM194 protein DUF4884 PF16225.5 ORF79867 - 0.18 11.9 2.4 8.9 6.5 0.0 3.6 3 1 1 4 4 4 0 Domain of unknown function (DUF4884) Pkinase PF00069.25 ORF7637 - 1.3e-13 50.9 0.4 1.7e-12 47.3 0.4 2.2 1 1 0 1 1 1 1 Protein kinase domain Pox_ser-thr_kin PF05445.11 ORF7637 - 0.0011 18.0 3.7 0.0017 17.4 3.7 1.2 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase CortBP2 PF09727.9 ORF75524 - 0.0016 18.3 15.7 0.0016 18.3 15.7 2.0 1 1 1 2 2 2 1 Cortactin-binding protein-2 HD_3 PF13023.6 ORF75524 - 0.2 11.6 8.9 0.17 11.8 7.6 1.5 1 1 0 1 1 1 0 HD domain SlyX PF04102.12 ORF75524 - 0.3 11.7 7.3 5.4 7.7 1.8 2.6 1 1 1 2 2 2 0 SlyX Atg14 PF10186.9 ORF75524 - 0.85 8.6 14.7 0.35 9.9 12.4 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 ORF75524 - 1.5 8.3 10.0 2.1 7.9 10.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF848 PF05852.11 ORF75524 - 2.7 8.1 11.8 1.9 8.6 9.2 1.9 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) DUF4140 PF13600.6 ORF75524 - 7.2 7.1 8.6 6.8e+02 0.8 8.6 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF4407 PF14362.6 ORF75524 - 9.6 5.5 9.5 5.8 6.2 8.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1995 PF09353.10 ORF75115 - 1e-09 38.7 0.0 1.3e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1995) Adenyl_cycl_N PF12633.7 ORF73565 - 0.0022 18.0 0.1 0.0035 17.3 0.1 1.3 1 0 0 1 1 1 1 Adenylate cyclase NT domain DUF707 PF05212.12 ORF73565 - 0.014 14.6 0.3 0.029 13.6 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF707) NHL PF01436.21 ORF73407 - 0.00026 20.9 0.7 0.082 13.0 0.0 3.3 3 0 0 3 3 3 2 NHL repeat ANAPC4_WD40 PF12894.7 ORF72377 - 0.037 14.3 0.0 1.7 9.0 0.1 2.5 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Torus PF16131.5 ORF71206 - 0.024 15.4 0.6 0.042 14.5 0.6 1.6 1 0 0 1 1 1 0 Torus domain zf-CXXC PF02008.20 ORF71206 - 0.58 10.2 8.0 1.7 8.8 8.0 1.8 1 1 0 1 1 1 0 CXXC zinc finger domain TOPRIM_C PF16898.5 ORF71049 - 1.2e-19 70.8 0.0 2.2e-19 70.0 0.0 1.4 1 0 0 1 1 1 1 C-terminal associated domain of TOPRIM Toprim PF01751.22 ORF71049 - 4.3e-09 36.5 0.0 6.2e-09 36.0 0.0 1.2 1 0 0 1 1 1 1 Toprim domain Toxin_18 PF08087.11 ORF69887 - 0.047 13.7 0.1 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 Conotoxin O-superfamily DUF485 PF04341.12 ORF69887 - 0.75 9.8 4.4 2.8 8.0 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function, DUF485 Pkinase PF00069.25 ORF6864 - 4.5e-14 52.4 0.2 8.2e-14 51.6 0.2 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6864 - 7.1e-08 32.0 0.2 1.3e-07 31.1 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase RRM_1 PF00076.22 ORF68003 - 1.6e-08 34.3 0.0 4.1e-08 32.9 0.0 1.6 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF68003 - 0.019 15.0 0.0 0.019 15.0 0.0 1.9 2 0 0 2 2 2 0 RNA binding motif Nup35_RRM_2 PF14605.6 ORF68003 - 0.056 13.5 0.0 0.086 12.9 0.0 1.3 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif CobT PF06213.12 ORF68003 - 0.66 9.3 11.8 0.9 8.9 11.8 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT RR_TM4-6 PF06459.12 ORF68003 - 2.9 7.7 7.2 3.8 7.3 7.2 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 ORF68003 - 4.7 5.9 11.3 6 5.5 11.3 1.1 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 ORF68003 - 4.9 5.8 17.3 6.3 5.5 17.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CDC45 PF02724.14 ORF68003 - 5.6 5.1 15.9 6.6 4.9 15.9 1.1 1 0 0 1 1 1 0 CDC45-like protein Transformer PF06495.11 ORF68003 - 6.7 6.8 18.3 9.1 6.3 18.3 1.2 1 0 0 1 1 1 0 Fruit fly transformer protein Sigma70_ner PF04546.13 ORF67666 - 0.015 15.2 9.0 0.016 15.1 5.8 1.9 1 1 1 2 2 2 0 Sigma-70, non-essential region DUF724 PF05266.14 ORF67666 - 0.029 14.2 9.3 0.047 13.5 9.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Atg14 PF10186.9 ORF67666 - 0.11 11.6 9.5 0.14 11.2 9.5 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4407 PF14362.6 ORF67666 - 0.2 10.9 6.0 0.35 10.2 6.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) COG5 PF10392.9 ORF67666 - 0.29 11.3 9.7 2.2 8.4 9.3 2.0 1 1 1 2 2 2 0 Golgi transport complex subunit 5 Prefoldin_2 PF01920.20 ORF67666 - 0.3 11.1 8.1 0.79 9.7 0.9 2.7 2 1 0 2 2 2 0 Prefoldin subunit ATG16 PF08614.11 ORF67666 - 0.38 10.9 16.6 0.55 10.4 16.6 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) APG6_N PF17675.1 ORF67666 - 0.75 10.3 17.9 2.2 8.8 16.9 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region COG2 PF06148.11 ORF67666 - 1.1 9.3 11.5 0.25 11.4 1.4 2.1 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Spc7 PF08317.11 ORF67666 - 1.6 7.5 16.1 2.1 7.2 16.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein FapA PF03961.13 ORF67666 - 1.8 7.1 5.6 2.3 6.7 5.6 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Snapin_Pallidin PF14712.6 ORF67666 - 2 8.9 10.2 0.55 10.7 3.7 2.6 1 1 2 3 3 3 0 Snapin/Pallidin DUF5315 PF17242.2 ORF67666 - 3.9 7.4 12.9 0.59 10.0 1.5 2.9 2 1 1 3 3 3 0 Disordered region of unknown function (DUF5315) PRKG1_interact PF15898.5 ORF67666 - 8 7.4 15.6 8.5 7.3 3.3 2.2 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain bZIP_Maf PF03131.17 ORF65653 - 1.2 9.7 13.4 2.6 8.6 0.2 3.1 3 0 0 3 3 3 0 bZIP Maf transcription factor MraZ PF02381.18 ORF62613 - 0.083 12.9 0.0 7.4 6.6 0.0 2.3 2 0 0 2 2 2 0 MraZ protein, putative antitoxin-like CTP_transf_3 PF02348.19 ORF60907 - 0.014 15.3 0.2 0.026 14.5 0.2 1.5 1 0 0 1 1 1 0 Cytidylyltransferase ADP_ribosyl_GH PF03747.14 ORF60201 - 2.5e-17 63.6 0.0 3.7e-17 63.0 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase TfuA PF07812.12 ORF60201 - 0.11 12.2 0.3 2.5 7.9 0.1 2.4 2 1 0 2 2 2 0 TfuA-like protein Chitin_synth_2 PF03142.15 ORF59918 - 6e-13 48.2 0.0 3e-12 45.9 0.0 1.9 2 0 0 2 2 2 1 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF59918 - 0.0018 18.2 0.0 0.0032 17.4 0.0 1.4 2 0 0 2 2 2 1 Glycosyl transferase family group 2 OrgA_MxiK PF09482.10 ORF59575 - 0.047 13.6 0.1 4.1 7.2 0.0 2.2 1 1 1 2 2 2 0 Bacterial type III secretion apparatus protein (OrgA_MxiK) Ank_2 PF12796.7 ORF56122 - 1.5e-13 51.2 0.0 3.5e-13 49.9 0.0 1.6 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF56122 - 7.5e-11 41.3 0.0 9.4e-06 25.6 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF56122 - 2e-09 37.8 0.1 2e-07 31.4 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF56122 - 3.5e-06 27.2 0.0 0.0013 19.1 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 ORF56122 - 3.7e-06 27.1 0.0 0.0047 17.2 0.0 2.9 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Phos_pyr_kin PF08543.12 ORF55583 - 5.4e-64 215.9 0.2 6.1e-64 215.7 0.2 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 ORF55583 - 1e-08 34.8 0.0 2.7e-08 33.5 0.0 1.6 1 1 0 1 1 1 1 pfkB family carbohydrate kinase rve PF00665.26 ORF54661 - 2.8e-25 88.8 0.0 3.8e-25 88.4 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF54661 - 6.2e-18 64.3 0.0 1.3e-17 63.3 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.6 ORF54661 - 1.9e-05 24.7 0.5 0.005 16.9 0.1 2.4 2 0 0 2 2 2 2 HTH-like domain RRM_1 PF00076.22 ORF54292 - 1.6e-08 34.3 0.0 4.1e-08 32.9 0.0 1.6 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF54292 - 0.019 15.0 0.0 0.019 15.0 0.0 1.9 2 0 0 2 2 2 0 RNA binding motif Nup35_RRM_2 PF14605.6 ORF54292 - 0.056 13.5 0.0 0.086 12.9 0.0 1.3 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif CobT PF06213.12 ORF54292 - 0.66 9.3 11.8 0.9 8.9 11.8 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT RR_TM4-6 PF06459.12 ORF54292 - 2.9 7.7 7.2 3.8 7.3 7.2 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 ORF54292 - 4.7 5.9 11.3 6 5.5 11.3 1.1 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 ORF54292 - 4.9 5.8 17.3 6.3 5.5 17.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CDC45 PF02724.14 ORF54292 - 5.6 5.1 15.9 6.6 4.9 15.9 1.1 1 0 0 1 1 1 0 CDC45-like protein Transformer PF06495.11 ORF54292 - 6.7 6.8 18.3 9.1 6.3 18.3 1.2 1 0 0 1 1 1 0 Fruit fly transformer protein DUF2358 PF10184.9 ORF5210 - 1.7e-07 31.5 0.0 2.5e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2358) BATS PF06968.13 ORF52056 - 2.3e-21 75.7 0.1 4.8e-21 74.7 0.0 1.6 2 0 0 2 2 2 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 ORF52056 - 1.6e-11 44.9 0.0 3.3e-10 40.6 0.0 2.3 2 1 0 2 2 2 1 Radical SAM superfamily Hydrolase_4 PF12146.8 ORF51669 - 4.2e-10 39.3 0.3 7.3e-08 32.0 0.1 2.1 1 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF51669 - 1.9e-09 37.6 0.0 2.1e-05 24.3 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF51669 - 1.6e-06 28.9 6.7 1.4e-05 25.8 6.7 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_4 PF08386.10 ORF51669 - 6.2e-05 23.1 0.1 0.00016 21.7 0.1 1.6 2 0 0 2 2 2 1 TAP-like protein Abhydrolase_5 PF12695.7 ORF51669 - 0.0055 16.5 0.0 0.79 9.5 0.0 2.3 1 1 0 2 2 2 1 Alpha/beta hydrolase family Amidase PF01425.21 ORF51669 - 0.029 13.3 0.0 0.05 12.5 0.0 1.3 1 0 0 1 1 1 0 Amidase Ser_hydrolase PF06821.13 ORF51669 - 0.039 13.8 0.1 0.27 11.1 0.1 2.1 1 1 0 1 1 1 0 Serine hydrolase Abhydrolase_2 PF02230.16 ORF51669 - 0.1 12.4 0.0 1.7 8.4 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Esterase PF00756.20 ORF51669 - 0.12 12.0 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Putative esterase LIP PF03583.14 ORF51669 - 0.12 11.6 0.1 6.4 6.0 0.0 2.2 2 0 0 2 2 2 0 Secretory lipase COX6B PF02297.17 ORF4747 - 0.032 14.5 0.0 0.077 13.2 0.0 1.7 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIb CSN4_RPN5_eIF3a PF18420.1 ORF4747 - 0.21 11.8 1.0 0.52 10.5 0.1 2.0 2 0 0 2 2 2 0 CSN4/RPN5/eIF3a helix turn helix domain CcmE PF03100.15 ORF47268 - 2.2e-12 47.0 0.0 3.1e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 CcmE Glutaredoxin PF00462.24 ORF46582 - 2.7e-17 62.7 0.0 5.4e-14 52.2 0.0 2.3 2 0 0 2 2 2 2 Glutaredoxin GST_N_3 PF13417.6 ORF46582 - 0.036 14.5 0.0 0.13 12.7 0.0 1.9 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain DnaJ PF00226.31 ORF44160 - 0.0051 16.9 0.1 0.011 15.9 0.1 1.5 1 0 0 1 1 1 1 DnaJ domain RRM_1 PF00076.22 ORF44160 - 0.026 14.3 0.0 0.062 13.1 0.0 1.6 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Actin PF00022.19 ORF41190 - 4.9e-52 176.9 0.0 1.7e-43 148.8 0.0 2.0 1 1 1 2 2 2 2 Actin Cor1 PF04803.12 ORF41190 - 0.0051 17.0 1.1 0.0097 16.1 1.1 1.4 1 0 0 1 1 1 1 Cor1/Xlr/Xmr conserved region Alg6_Alg8 PF03155.15 ORF41061 - 0.0055 15.7 2.8 0.0073 15.3 2.8 1.1 1 0 0 1 1 1 1 ALG6, ALG8 glycosyltransferase family DUF2776 PF10951.8 ORF41061 - 0.02 14.1 0.1 0.026 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) DUF3290 PF11694.8 ORF41061 - 0.025 14.5 0.6 0.039 13.9 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) E1-E2_ATPase PF00122.20 ORF41061 - 0.056 13.0 0.1 0.078 12.5 0.1 1.2 1 0 0 1 1 1 0 E1-E2 ATPase EbsA PF17255.2 ORF41061 - 0.07 13.5 0.1 0.095 13.0 0.1 1.2 1 0 0 1 1 1 0 EbsA-like protein Popeye PF04831.13 ORF41061 - 0.19 11.9 1.7 0.37 10.9 1.7 1.4 1 0 0 1 1 1 0 Popeye protein conserved region Ninjurin PF04923.12 ORF41061 - 0.19 11.7 2.1 0.45 10.5 2.1 1.6 1 1 0 1 1 1 0 Ninjurin Peptidase_S21 PF00716.17 ORF41061 - 0.2 11.3 0.0 0.28 10.8 0.0 1.2 1 0 0 1 1 1 0 Assemblin (Peptidase family S21) DUF4131 PF13567.6 ORF41061 - 0.7 9.5 2.3 1.1 8.9 2.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) SpoIIE PF07228.12 ORF41047 - 1.3e-15 57.9 0.0 1.5e-15 57.6 0.0 1.0 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) PP2C PF00481.21 ORF41047 - 8.2e-11 42.0 0.2 8.2e-05 22.4 0.0 2.1 2 0 0 2 2 2 2 Protein phosphatase 2C PP2C_2 PF13672.6 ORF41047 - 2.6e-05 24.0 0.0 3.7e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C Tau95 PF09734.9 ORF39968 - 5.4e-17 62.9 0.1 8e-17 62.4 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain SET PF00856.28 ORF39144 - 1.4e-07 32.1 0.0 2e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 SET domain Torus PF16131.5 ORF36715 - 0.024 15.4 0.6 0.042 14.5 0.6 1.6 1 0 0 1 1 1 0 Torus domain zf-CXXC PF02008.20 ORF36715 - 0.58 10.2 8.0 1.7 8.8 8.0 1.8 1 1 0 1 1 1 0 CXXC zinc finger domain Choline_transpo PF04515.12 ORF36352 - 3.3e-38 131.7 10.2 3.9e-38 131.5 10.2 1.0 1 0 0 1 1 1 1 Plasma-membrane choline transporter DUF1345 PF07077.11 ORF36352 - 0.054 13.2 0.2 0.054 13.2 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1345) HSCB_C PF07743.13 ORF35707 - 0.013 16.0 5.3 0.013 16.0 5.3 2.2 2 0 0 2 2 2 0 HSCB C-terminal oligomerisation domain YnfE PF17452.2 ORF35707 - 4.1 7.8 12.0 0.92 9.8 5.4 2.4 1 1 1 2 2 2 0 Uncharacterized YnfE-like DUF4407 PF14362.6 ORF35008 - 0.13 11.5 3.2 0.17 11.2 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CobU PF02283.16 ORF35008 - 0.15 11.6 3.5 0.21 11.1 3.5 1.1 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase DUF2443 PF10398.9 ORF35008 - 0.48 10.5 3.5 0.86 9.7 3.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) FidL_like PF15941.5 ORF35008 - 2.6 8.6 6.1 4.3 7.8 6.1 1.3 1 0 0 1 1 1 0 FidL-like putative membrane protein Cytochrom_B561 PF03188.16 ORF31593 - 1.7e-09 37.9 9.1 1.2e-08 35.1 8.1 2.6 2 1 0 2 2 2 1 Eukaryotic cytochrome b561 CTP_transf_3 PF02348.19 ORF30971 - 0.014 15.3 0.2 0.026 14.5 0.2 1.5 1 0 0 1 1 1 0 Cytidylyltransferase UL45 PF05473.12 ORF30485 - 0.009 15.7 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 UL45 protein, carbohydrate-binding C-type lectin-like Xan_ur_permease PF00860.20 ORF29573 - 3e-35 121.7 14.6 3e-35 121.7 14.6 1.4 1 1 0 1 1 1 1 Permease family YrhC PF14143.6 ORF29361 - 0.0057 16.7 0.4 0.055 13.6 0.0 2.2 2 0 0 2 2 2 1 YrhC-like protein DUF2615 PF11027.8 ORF29361 - 0.033 14.3 1.5 0.036 14.2 0.0 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2615) 7tm_1 PF00001.21 ORF29361 - 0.12 11.7 1.0 0.74 9.1 0.1 1.9 1 1 0 2 2 2 0 7 transmembrane receptor (rhodopsin family) SCAB_CC PF16712.5 ORF28379 - 0.0046 16.8 3.3 0.0064 16.3 3.3 1.2 1 0 0 1 1 1 1 Coiled-coil regions of plant-specific actin-binding protein zf-C3HC4 PF00097.25 ORF28379 - 0.015 15.2 6.1 0.04 13.8 6.1 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF28379 - 0.028 14.4 6.4 0.12 12.4 6.4 2.1 1 1 0 1 1 1 0 zinc-RING finger domain PilO PF04350.13 ORF28379 - 0.04 14.1 1.9 0.057 13.6 1.9 1.2 1 0 0 1 1 1 0 Pilus assembly protein, PilO Nsp1_C PF05064.13 ORF28379 - 0.063 13.1 0.8 0.13 12.1 0.8 1.6 1 1 0 1 1 1 0 Nsp1-like C-terminal region zf-RING_4 PF14570.6 ORF28379 - 0.35 10.7 8.7 7.3 6.5 7.5 2.8 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RING_2 PF13639.6 ORF28379 - 1.4 9.3 13.2 0.062 13.6 7.0 2.0 2 0 0 2 2 2 0 Ring finger domain Methyltransf_11 PF08241.12 ORF27065 - 9.5e-14 51.8 0.0 1.4e-13 51.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF27065 - 2.7e-11 44.0 0.0 3.9e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF27065 - 1.9e-09 37.5 0.0 2.3e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF27065 - 0.0006 19.2 0.0 0.00082 18.8 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF27065 - 0.00085 20.0 0.0 0.0012 19.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 ORF27065 - 0.015 15.3 0.0 0.021 14.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF27065 - 0.021 14.7 0.0 0.031 14.1 0.0 1.3 1 1 0 1 1 1 0 Methyltransferase domain Pro_isomerase PF00160.21 ORF26653 - 2.6e-15 57.0 0.0 4.3e-15 56.3 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rotamase PF00639.21 ORF26653 - 7.7e-15 55.6 0.0 1.4e-14 54.8 0.0 1.5 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF26653 - 2.3e-14 53.9 0.0 3.8e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 PPIC-type PPIASE domain ADP_ribosyl_GH PF03747.14 ORF26276 - 2.5e-17 63.6 0.0 3.7e-17 63.0 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase TfuA PF07812.12 ORF26276 - 0.11 12.2 0.3 2.5 7.9 0.1 2.4 2 1 0 2 2 2 0 TfuA-like protein CDC27 PF09507.10 ORF24958 - 4.6 6.5 42.6 5.9 6.2 42.6 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 WGR PF05406.15 ORF21800 - 4.5e-20 71.5 1.3 8.3e-20 70.6 1.3 1.4 1 0 0 1 1 1 1 WGR domain DUF4980 PF16352.5 ORF21800 - 0.038 14.0 0.1 0.099 12.6 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4980) PPP1R35_C PF15503.6 ORF21800 - 0.15 11.9 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 35 C-terminus GnHR_trans PF12369.8 ORF21021 - 0.031 15.1 0.2 0.1 13.4 0.2 1.8 1 0 0 1 1 1 0 Gonadotropin hormone receptor transmembrane region Svf1 PF08622.10 ORF21021 - 0.04 14.0 0.1 0.052 13.6 0.1 1.3 1 0 0 1 1 1 0 Svf1-like N-terminal lipocalin domain adh_short PF00106.25 ORF20753 - 4.2e-22 78.6 0.0 5.8e-22 78.1 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF20753 - 1.3e-20 73.9 0.0 2.8e-20 72.9 0.0 1.5 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase HSP70 PF00012.20 ORF20753 - 0.079 11.1 0.1 0.1 10.7 0.1 1.1 1 0 0 1 1 1 0 Hsp70 protein TSP_1 PF00090.19 ORF19988 - 4.3e-11 42.9 31.4 4.8e-06 26.7 12.6 3.0 2 1 0 2 2 2 2 Thrombospondin type 1 domain SAPS PF04499.15 ORF19988 - 1.2 7.8 5.6 1.6 7.5 5.6 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Methyltransf_3 PF01596.17 ORF19944 - 4.3e-05 22.8 0.0 6.3e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF19944 - 0.0096 16.9 0.3 0.11 13.5 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase domain DUF4033 PF13225.6 ORF152 - 2.9e-17 62.4 0.3 4.8e-17 61.7 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4033) Mgm101p PF06420.12 ORF152 - 0.12 11.9 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial genome maintenance MGM101 DEP PF00610.21 ORF13593 - 1.2e-08 34.9 0.0 2.3e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) DUF4577 PF15145.6 ORF13275 - 0.047 13.7 0.1 0.13 12.3 0.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4577) IspD PF01128.19 ORF107685 - 2.1e-51 174.8 1.5 2.4e-51 174.6 1.5 1.0 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transf_3 PF12804.7 ORF107685 - 1.6e-06 28.6 0.1 1.9e-06 28.3 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain ComA PF02679.15 ORF107685 - 0.028 13.9 0.1 0.054 13.0 0.1 1.6 1 1 0 1 1 1 0 (2R)-phospho-3-sulfolactate synthase (ComA) NTP_transferase PF00483.23 ORF107685 - 0.079 12.5 0.0 0.15 11.6 0.0 1.5 1 1 0 1 1 1 0 Nucleotidyl transferase Sld5 PF05916.11 ORF106829 - 2.2e-10 41.0 0.3 3.4e-10 40.3 0.3 1.3 1 0 0 1 1 1 1 GINS complex protein Ank_2 PF12796.7 ORF106359 - 1.5e-13 51.2 0.0 3.5e-13 49.9 0.0 1.6 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF106359 - 7.5e-11 41.3 0.0 9.4e-06 25.6 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF106359 - 2e-09 37.8 0.1 2e-07 31.4 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF106359 - 3.5e-06 27.2 0.0 0.0013 19.1 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 ORF106359 - 3.7e-06 27.1 0.0 0.0047 17.2 0.0 2.9 1 1 2 3 3 3 2 Ankyrin repeats (many copies) PA26 PF04636.13 ORF104258 - 0.025 13.5 0.1 0.032 13.1 0.1 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) DUF3290 PF11694.8 ORF104258 - 0.036 14.0 0.7 0.065 13.2 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) TRP PF06011.12 ORF104258 - 0.059 12.1 0.1 0.078 11.7 0.1 1.4 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF2254 PF10011.9 ORF104258 - 0.065 12.1 0.1 0.084 11.7 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Pkinase PF00069.25 ORF103343 - 1.1e-53 182.3 0.3 1.5e-53 181.9 0.3 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF103343 - 9.5e-25 87.3 0.0 1.2e-24 87.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF103343 - 6e-06 25.8 0.1 8.2e-06 25.3 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF103343 - 5.5e-05 23.2 0.0 0.00037 20.5 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF103343 - 0.0026 17.4 2.4 0.0049 16.5 0.6 2.1 1 1 0 2 2 2 1 Choline/ethanolamine kinase YcxB PF14317.6 ORF103343 - 0.016 14.9 2.1 0.054 13.2 1.6 2.1 2 0 0 2 2 2 0 YcxB-like protein Torus PF16131.5 ORF100961 - 0.024 15.4 0.6 0.042 14.5 0.6 1.6 1 0 0 1 1 1 0 Torus domain zf-CXXC PF02008.20 ORF100961 - 0.58 10.2 8.0 1.7 8.8 8.0 1.8 1 1 0 1 1 1 0 CXXC zinc finger domain DUF5453 PF17534.2 NODE_33405_length_650_cov_84.429268_g26602_i0reverse_frame_1 - 0.00087 19.3 0.8 0.0015 18.5 0.8 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5453) Clr2 PF10383.9 NODE_33405_length_650_cov_84.429268_g26602_i0reverse_frame_1 - 0.043 14.6 0.0 0.056 14.2 0.0 1.2 1 0 0 1 1 1 0 Transcription-silencing protein Clr2 DUF4248 PF14053.6 NODE_33377_length_650_cov_756.432520_g24706_i1forward_frame_1 - 0.15 12.1 0.3 0.29 11.2 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4248) p450 PF00067.22 NODE_33370_length_651_cov_3.875000_g26570_i0reverse_frame_1 - 9.3e-13 47.7 0.0 9.3e-13 47.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 AraC_binding PF02311.19 NODE_33368_length_651_cov_5.672078_g26568_i0forward_frame_1 - 0.037 13.9 0.4 0.06 13.2 0.4 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain WRC PF08879.10 NODE_33359_length_651_cov_98.659091_g26559_i0forward_frame_1 - 4.8 7.0 9.6 1.6 8.5 6.4 1.9 2 0 0 2 2 2 0 WRC Toxin_37 PF11415.8 NODE_33313_length_652_cov_5.850891_g26520_i0forward_frame_2 - 0.046 13.6 0.7 0.12 12.2 0.2 2.0 2 0 0 2 2 2 0 Antifungal peptide termicin DUF4947 PF16305.5 NODE_33308_length_652_cov_58.588331_g26517_i0forward_frame_2 - 0.18 11.8 11.3 0.029 14.4 5.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4947) Na_trans_assoc PF06512.13 NODE_33308_length_652_cov_58.588331_g26517_i0forward_frame_2 - 0.59 10.4 10.8 0.83 9.9 10.8 1.2 1 0 0 1 1 1 0 Sodium ion transport-associated DUF2853 PF11015.8 NODE_33296_length_652_cov_136.538088_g26506_i0forward_frame_2 - 0.069 13.8 0.2 0.22 12.2 0.2 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2853) Nucleocapsid-N PF11030.8 NODE_33288_length_652_cov_219.875203_g26499_i0reverse_frame_2 - 0.22 11.4 0.7 0.34 10.8 0.7 1.2 1 0 0 1 1 1 0 Nucleocapsid protein N BCL9 PF11502.8 NODE_33279_length_652_cov_375.120462_g26490_i0reverse_frame_3 - 0.064 13.1 0.2 0.13 12.0 0.2 1.5 1 0 0 1 1 1 0 B-cell lymphoma 9 protein HCV_NS2 PF01538.18 NODE_33276_length_652_cov_571.072607_g26487_i0reverse_frame_3 - 0.043 13.5 0.2 0.074 12.7 0.2 1.4 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 SLATT_1 PF18181.1 NODE_33265_length_653_cov_4.037217_g26479_i0reverse_frame_3 - 0.46 10.4 1.5 0.74 9.8 0.1 1.8 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 Uds1 PF15456.6 NODE_33265_length_653_cov_4.037217_g26479_i0forward_frame_2 - 0.33 11.1 6.4 0.094 12.9 0.6 2.5 1 1 1 3 3 3 0 Up-regulated During Septation Pkinase PF00069.25 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 4.7e-46 157.3 0.1 6.5e-46 156.8 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 1e-23 84.0 0.1 1.1e-23 83.8 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.00032 19.6 0.0 0.00035 19.5 0.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.0022 17.1 0.1 0.0034 16.5 0.1 1.2 1 0 0 1 1 1 1 Seadornavirus VP7 Kinase-like PF14531.6 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.012 15.0 0.0 0.017 14.4 0.0 1.3 1 0 0 1 1 1 0 Kinase-like Kdo PF06293.14 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.027 13.8 0.3 0.058 12.7 0.3 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YukC PF10140.9 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.052 12.4 0.2 0.22 10.3 0.0 1.8 1 1 1 2 2 2 0 WXG100 protein secretion system (Wss), protein YukC APH PF01636.23 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.15 12.0 0.1 1.3 8.9 0.1 1.9 2 0 0 2 2 2 0 Phosphotransferase enzyme family Agenet PF05641.12 NODE_33261_length_653_cov_73.389968_g26475_i0reverse_frame_2 - 0.023 15.2 0.0 0.055 13.9 0.0 1.6 1 0 0 1 1 1 0 Agenet domain OAS1_C PF10421.9 NODE_33238_length_653_cov_524.401294_g26456_i0reverse_frame_3 - 0.014 15.0 0.1 0.02 14.4 0.1 1.2 1 0 0 1 1 1 0 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus DUF5100 PF17029.5 NODE_33238_length_653_cov_524.401294_g26456_i0forward_frame_2 - 0.063 13.1 0.0 1.6 8.6 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5100) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks88.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks88.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks88.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks88.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2304 PF10066.9 NODE_33193_length_654_cov_256.725363_g26416_i0forward_frame_3 - 0.89 9.8 8.7 0.045 14.0 3.3 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) DUF4215 PF13948.6 NODE_33188_length_654_cov_358.269790_g26411_i0forward_frame_3 - 2.3e-16 59.9 31.8 6.6e-08 32.9 10.0 3.9 4 1 0 4 4 4 3 Domain of unknown function (DUF4215) DUF3410 PF11890.8 ORF99645 - 0.031 14.1 0.4 0.066 13.0 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) adh_short_C2 PF13561.6 ORF99024 - 2.2e-55 187.8 1.2 2.5e-55 187.6 1.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF99024 - 7.2e-47 159.4 3.0 8.4e-47 159.2 3.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF99024 - 4.9e-14 52.6 0.3 7.5e-14 52.0 0.3 1.3 1 0 0 1 1 1 1 KR domain Seadorna_Vp10 PF07322.11 ORF99024 - 0.037 13.4 0.1 0.073 12.5 0.0 1.5 2 0 0 2 2 2 0 Seadornavirus Vp10 zf-CXXC PF02008.20 ORF98088 - 2 8.5 12.0 1.7 8.8 2.9 2.6 2 0 0 2 2 2 0 CXXC zinc finger domain Glt_symporter PF03616.14 ORF97484 - 0.082 11.6 2.6 0.14 10.8 1.7 1.7 2 0 0 2 2 2 0 Sodium/glutamate symporter CSD PF00313.22 ORF96686 - 0.00091 19.0 0.1 0.0015 18.4 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain GREB1 PF15782.5 ORF96686 - 1.2 6.2 19.4 1.2 6.2 19.4 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer RR_TM4-6 PF06459.12 ORF96686 - 4.6 7.0 22.4 0.17 11.7 15.3 1.8 2 0 0 2 2 2 0 Ryanodine Receptor TM 4-6 Metallophos PF00149.28 ORF96042 - 7.6e-14 52.7 0.4 8.9e-14 52.5 0.4 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 ORF96042 - 0.12 11.7 0.0 0.47 9.7 0.0 1.7 2 0 0 2 2 2 0 Metallophosphoesterase, calcineurin superfamily Lipase_GDSL_2 PF13472.6 ORF95875 - 8.4e-07 29.5 0.0 1.1e-06 29.1 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family GST_N_3 PF13417.6 ORF94854 - 1.3e-11 44.7 0.0 2.2e-11 44.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF94854 - 1.8e-11 44.2 0.0 3e-11 43.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF94854 - 1.6e-07 31.5 0.0 3.1e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF94854 - 1.2e-05 25.5 0.0 2.1e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF94854 - 2.2e-05 24.6 0.0 3.7e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF94854 - 8.1e-05 22.8 0.1 0.00016 21.8 0.1 1.5 1 0 0 1 1 1 1 Glutaredoxin GST_C_2 PF13410.6 ORF94854 - 0.00017 21.6 0.0 0.0016 18.5 0.0 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain Methyltransf_24 PF13578.6 ORF93080 - 4e-08 34.2 0.0 6e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF93080 - 9.2e-08 32.7 0.0 1.9e-07 31.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF93080 - 4.5e-06 27.3 0.0 6.5e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF93080 - 6.9e-06 26.6 0.0 1.3e-05 25.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF93080 - 9.7e-06 25.4 0.0 1.3e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF93080 - 0.004 16.7 0.0 0.0055 16.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 ORF93080 - 0.062 13.1 0.0 0.085 12.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain GST_N_3 PF13417.6 ORF91077 - 6.1e-09 36.2 0.0 1.1e-08 35.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF91077 - 2.5e-08 33.8 0.0 2e-07 30.9 0.0 2.4 3 0 0 3 3 3 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF91077 - 6.5e-08 32.8 0.0 1.4e-07 31.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF91077 - 1e-07 32.2 0.0 1.9e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF91077 - 3.1e-07 30.5 0.0 5e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF91077 - 7.8e-05 22.8 0.0 0.00012 22.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Wzt_C PF14524.6 ORF91077 - 0.066 13.3 0.0 0.088 12.8 0.0 1.1 1 0 0 1 1 1 0 Wzt C-terminal domain DUF3410 PF11890.8 ORF89886 - 0.031 14.1 0.4 0.066 13.0 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) ubiquitin PF00240.23 ORF88787 - 4e-09 36.1 3.4 2.7e-07 30.2 0.6 2.8 3 0 0 3 3 3 2 Ubiquitin family Rad60-SLD PF11976.8 ORF88787 - 2.2e-08 33.8 3.0 1.4e-05 24.8 0.5 3.0 3 0 0 3 3 3 2 Ubiquitin-2 like Rad60 SUMO-like PI3K_rbd PF00794.18 ORF88787 - 0.011 15.9 0.0 0.67 10.1 0.0 2.4 2 0 0 2 2 2 0 PI3-kinase family, ras-binding domain FERM_f0 PF16511.5 ORF88787 - 0.1 12.9 0.0 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 N-terminal or F0 domain of Talin-head FERM DUF104 PF01954.16 ORF88787 - 0.18 12.3 2.3 0.19 12.2 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function DUF104 Pkinase PF00069.25 ORF87735 - 4.6e-50 170.4 0.2 5.3e-50 170.2 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF87735 - 3.1e-28 98.8 0.1 3.8e-28 98.5 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase YmzC PF14157.6 ORF87735 - 1.9e-05 24.7 2.0 0.00026 21.0 0.2 2.5 3 0 0 3 3 3 1 YmzC-like protein Kinase-like PF14531.6 ORF87735 - 0.00098 18.5 0.0 0.0033 16.8 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF87735 - 0.058 12.2 0.1 0.08 11.7 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase RIO1 PF01163.22 ORF87735 - 0.089 12.4 1.3 0.15 11.6 1.2 1.5 1 1 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF87735 - 0.16 11.3 0.1 0.23 10.8 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Hydrolase_4 PF12146.8 ORF83825 - 2.2e-08 33.7 0.0 2.7e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF83825 - 4.6e-07 29.7 0.0 5.5e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold VirJ PF06057.11 ORF83825 - 0.0015 18.4 0.0 0.0027 17.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial virulence protein (VirJ) DUF915 PF06028.11 ORF83825 - 0.0019 17.6 0.0 0.0035 16.7 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF915) DUF900 PF05990.12 ORF83825 - 0.051 13.1 0.0 0.075 12.5 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) Cutinase PF01083.22 ORF83825 - 0.077 12.9 0.0 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 Cutinase ACAS_N PF16177.5 ORF81094 - 0.11 12.4 0.2 0.32 11.0 0.2 1.7 1 0 0 1 1 1 0 Acetyl-coenzyme A synthetase N-terminus Fer4_17 PF13534.6 ORF81094 - 0.12 12.9 3.4 0.44 11.1 3.4 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Nitroreductase PF00881.24 ORF7967 - 2.1e-33 115.8 0.0 2.5e-33 115.5 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 ORF7967 - 0.00012 21.7 0.1 0.0002 21.0 0.1 1.3 1 0 0 1 1 1 1 Putative TM nitroreductase PV-1 PF06637.11 ORF79232 - 0.019 13.8 0.9 0.027 13.3 0.9 1.2 1 0 0 1 1 1 0 PV-1 protein (PLVAP) MatE PF01554.18 ORF79012 - 1.6e-07 31.2 24.2 1.8e-06 27.7 22.2 2.7 1 1 1 2 2 2 1 MatE RCC1_2 PF13540.6 ORF78426 - 1.7e-17 62.7 5.8 0.0011 18.7 0.1 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF78426 - 0.0077 16.2 1.2 5.6 6.9 0.1 3.7 1 1 2 4 4 4 2 Lipocalin / cytosolic fatty-acid binding protein family DUF359 PF04019.12 ORF78426 - 0.038 13.6 0.0 4.9 6.8 0.0 3.2 3 1 1 4 4 4 0 Protein of unknown function (DUF359) TPR_1 PF00515.28 ORF76102 - 5.3e-28 95.7 0.2 2.6e-08 33.3 0.0 4.3 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF76102 - 8.3e-26 88.0 3.3 4.6e-07 29.5 0.0 5.1 4 1 0 5 5 5 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF76102 - 1.2e-20 72.9 6.5 1.4e-10 40.7 0.0 4.5 2 1 2 4 4 4 3 TPR repeat TPR_8 PF13181.6 ORF76102 - 2.6e-16 58.4 0.0 2.5e-05 24.1 0.0 4.9 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF76102 - 2.3e-14 53.8 13.6 5.4e-09 36.6 0.0 3.4 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF76102 - 1.6e-13 50.7 8.5 1.5e-05 25.2 0.1 3.7 2 2 1 3 3 3 3 Tetratricopeptide repeat TPR_9 PF13371.6 ORF76102 - 9.9e-13 48.1 7.8 2.4e-06 27.6 0.6 3.4 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.6 ORF76102 - 4.5e-11 42.3 0.4 0.0029 17.9 0.0 4.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF76102 - 3.1e-10 40.0 3.1 0.0008 19.9 0.4 4.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF76102 - 3.5e-10 39.8 15.9 0.2 12.6 0.0 5.1 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_19 PF14559.6 ORF76102 - 3.9e-10 40.1 9.9 6.8e-06 26.5 0.3 3.5 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF76102 - 9.2e-09 34.7 3.0 0.52 10.5 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF76102 - 1.1e-08 34.6 11.1 0.019 14.8 0.1 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_4 PF07721.14 ORF76102 - 1.2e-08 34.7 2.1 0.69 10.7 0.0 5.5 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF76102 - 0.00045 19.7 0.2 0.55 9.5 0.0 2.2 2 0 0 2 2 2 2 MalT-like TPR region DUF3856 PF12968.7 ORF76102 - 0.0011 19.1 0.5 2.8 8.0 0.0 3.6 1 1 1 3 3 3 1 Domain of Unknown Function (DUF3856) TPR_21 PF09976.9 ORF76102 - 0.0012 18.6 3.0 0.58 9.8 0.0 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat-like domain NARP1 PF12569.8 ORF76102 - 0.0013 17.8 0.1 0.099 11.5 0.0 2.0 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 TPR_5 PF12688.7 ORF76102 - 0.0036 17.5 1.2 0.016 15.4 0.3 2.4 2 2 0 2 2 2 1 Tetratrico peptide repeat ANAPC5 PF12862.7 ORF76102 - 0.058 13.5 0.1 0.2 11.8 0.0 1.9 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 5 MIT PF04212.18 ORF76102 - 0.07 13.2 0.1 1.7 8.7 0.0 2.7 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain EF-hand_7 PF13499.6 ORF75450 - 4.2e-30 104.0 7.1 2.4e-14 53.5 4.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF75450 - 9.6e-28 93.6 13.5 2.9e-08 32.7 0.1 4.6 4 1 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF75450 - 9e-25 86.3 7.8 2.7e-09 36.8 0.6 4.0 2 1 3 5 5 5 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF75450 - 6.9e-20 69.2 10.9 6.1e-07 28.9 0.0 5.2 3 1 2 5 5 5 3 EF-hand domain EF-hand_5 PF13202.6 ORF75450 - 2.1e-12 45.9 13.0 0.00023 20.5 0.0 5.5 4 1 1 5 5 5 3 EF hand EF-hand_4 PF12763.7 ORF75450 - 4.3e-05 23.4 5.4 0.032 14.2 0.2 3.2 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF75450 - 0.00013 22.3 3.9 0.13 12.5 0.1 2.3 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF75450 - 0.0016 17.1 1.5 0.29 9.6 0.1 2.0 1 1 1 2 2 2 2 Family of unknown function (DUF5580) Ino80_Iec3 PF14612.6 ORF75450 - 0.0089 16.7 0.4 0.011 16.4 0.4 1.1 1 0 0 1 1 1 1 IEC3 subunit of the Ino80 complex, chromatin re-modelling SurA_N_2 PF13623.6 ORF75450 - 0.0092 15.9 1.4 2.4 8.0 0.2 2.3 2 0 0 2 2 2 2 SurA N-terminal domain EF-hand_9 PF14658.6 ORF75450 - 0.01 16.2 0.1 4.7 7.6 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain SurA_N_3 PF13624.6 ORF75450 - 0.017 14.9 2.7 0.38 10.5 0.2 2.3 2 1 0 2 2 2 0 SurA N-terminal domain HU-DNA_bdg PF14848.6 ORF75450 - 0.021 14.8 3.0 0.48 10.5 0.3 2.4 2 0 0 2 2 2 0 DNA-binding domain DUF3349 PF11829.8 ORF75450 - 0.023 15.5 0.8 1.5 9.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3349) PTS_2-RNA PF01885.16 ORF75450 - 0.026 14.6 0.3 4.1 7.4 0.0 2.2 1 1 1 2 2 2 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Caleosin PF05042.13 ORF75450 - 0.026 14.5 3.9 5.4 6.9 0.1 3.4 1 1 3 4 4 4 0 Caleosin related protein Herpes_U44 PF04533.13 ORF75450 - 0.029 14.0 3.7 0.44 10.1 0.3 2.1 1 1 1 2 2 2 0 Herpes virus U44 protein TBPIP PF07106.13 ORF75450 - 0.038 13.9 1.0 0.083 12.8 0.1 2.0 2 0 0 2 2 2 0 TBPIP/Hop2 winged helix domain DUF1456 PF07308.13 ORF75450 - 0.054 13.8 5.1 0.66 10.3 0.3 3.1 3 1 0 3 3 3 0 Protein of unknown function (DUF1456) GPS2_interact PF15784.5 ORF75450 - 0.13 12.7 3.7 0.26 11.7 0.2 2.7 2 1 1 3 3 3 0 G-protein pathway suppressor 2-interacting domain Enolase_C PF00113.22 ORF75450 - 0.17 11.1 6.4 0.12 11.6 3.6 1.8 1 1 0 2 2 2 0 Enolase, C-terminal TIM barrel domain EF-hand_11 PF08976.11 ORF75450 - 0.18 12.7 0.8 3.4 8.6 0.1 2.5 1 1 2 3 3 3 0 EF-hand domain QWRF PF04484.12 ORF75303 - 0.045 13.5 0.8 0.055 13.2 0.8 1.1 1 0 0 1 1 1 0 QWRF family gpW PF02831.15 ORF75241 - 0.024 14.6 0.0 0.057 13.3 0.0 1.7 1 0 0 1 1 1 0 gpW DUF4201 PF13870.6 ORF75241 - 0.033 13.9 19.3 0.14 11.9 0.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) Lectin_N PF03954.14 ORF75241 - 0.87 9.3 8.9 0.34 10.6 1.1 2.6 1 1 2 3 3 3 0 Hepatic lectin, N-terminal domain ECM11 PF15463.6 ORF75241 - 0.88 10.2 13.4 0.49 11.0 7.5 2.3 2 0 0 2 2 2 0 Extracellular mutant protein 11 DUF1319 PF07028.11 ORF75241 - 0.9 9.8 10.2 1.2 9.4 2.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1319) Nas2_N PF18265.1 ORF75241 - 1 9.3 0.1 1 9.3 0.1 3.7 4 1 1 5 5 5 0 Nas2 N_terminal domain Spc7 PF08317.11 ORF75241 - 1.7 7.5 27.1 2.4 7.0 5.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Leucyl-specific PF14795.6 ORF75241 - 2.2 8.4 4.7 1.8 8.7 0.6 2.7 2 1 0 2 2 2 0 Leucine-tRNA synthetase-specific domain DUF1664 PF07889.12 ORF75241 - 2.2 8.3 14.9 2.7 8.0 3.1 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF75241 - 3.9 7.8 25.4 20 5.5 13.3 3.0 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) CENP-K PF11802.8 ORF75241 - 8 5.9 23.1 0.18 11.3 3.2 2.1 1 1 1 2 2 2 0 Centromere-associated protein K BSD PF03909.17 ORF7480 - 0.087 12.8 0.2 0.16 12.0 0.2 1.4 1 0 0 1 1 1 0 BSD domain SUD-M PF11633.8 ORF7480 - 0.18 11.5 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 Single-stranded poly(A) binding domain AhpC-TSA PF00578.21 ORF73282 - 2.2e-36 124.5 0.0 3.4e-36 123.9 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF73282 - 1.9e-21 76.3 0.0 2.7e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF73282 - 3.4e-12 46.0 0.3 5.9e-12 45.2 0.3 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF73282 - 0.021 14.8 0.1 0.11 12.5 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC Filament PF00038.21 ORF72133 - 0.023 14.3 1.8 0.029 13.9 1.8 1.1 1 0 0 1 1 1 0 Intermediate filament protein TFIIA PF03153.13 ORF72133 - 2.1 8.3 7.4 2.4 8.0 7.4 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Glycos_transf_2 PF00535.26 ORF71171 - 0.02 14.7 0.0 0.03 14.1 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 DHHC PF01529.20 ORF70736 - 2.2e-35 121.7 12.3 2.8e-35 121.4 12.3 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase gpW PF02831.15 ORF700 - 0.024 14.6 0.0 0.057 13.3 0.0 1.7 1 0 0 1 1 1 0 gpW DUF4201 PF13870.6 ORF700 - 0.033 13.9 19.3 0.14 11.9 0.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) Lectin_N PF03954.14 ORF700 - 0.87 9.3 8.9 0.34 10.6 1.1 2.6 1 1 2 3 3 3 0 Hepatic lectin, N-terminal domain ECM11 PF15463.6 ORF700 - 0.88 10.2 13.4 0.49 11.0 7.5 2.3 2 0 0 2 2 2 0 Extracellular mutant protein 11 DUF1319 PF07028.11 ORF700 - 0.9 9.8 10.2 1.2 9.4 2.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1319) Nas2_N PF18265.1 ORF700 - 1 9.3 0.1 1 9.3 0.1 3.7 4 1 1 5 5 5 0 Nas2 N_terminal domain Spc7 PF08317.11 ORF700 - 1.7 7.5 27.1 2.4 7.0 5.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Leucyl-specific PF14795.6 ORF700 - 2.2 8.4 4.7 1.8 8.7 0.6 2.7 2 1 0 2 2 2 0 Leucine-tRNA synthetase-specific domain DUF1664 PF07889.12 ORF700 - 2.2 8.3 14.9 2.7 8.0 3.1 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF700 - 3.9 7.8 25.4 20 5.5 13.3 3.0 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) CENP-K PF11802.8 ORF700 - 8 5.9 23.1 0.18 11.3 3.2 2.1 1 1 1 2 2 2 0 Centromere-associated protein K Nucleoporin_FG PF13634.6 ORF67286 - 0.009 16.8 2.7 0.009 16.8 2.7 1.8 2 0 0 2 2 2 1 Nucleoporin FG repeat region WD40 PF00400.32 ORF67105 - 1.2e-08 35.4 0.3 6.2e-07 30.0 0.0 3.4 4 1 0 4 4 4 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF67105 - 1.3e-08 35.0 0.2 0.0013 19.0 0.0 3.3 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Coatomer_WDAD PF04053.14 ORF67105 - 0.081 11.9 0.0 4.7 6.1 0.0 2.0 1 1 1 2 2 2 0 Coatomer WD associated region Mersacidin PF16934.5 ORF67105 - 0.26 11.1 2.5 0.69 9.7 0.0 2.5 2 1 0 2 2 2 0 Two-component Enterococcus faecalis cytolysin (EFC) PseudoU_synth_2 PF00849.22 ORF67062 - 1.8e-14 54.1 0.2 5.3e-13 49.4 0.0 2.5 2 1 0 2 2 2 1 RNA pseudouridylate synthase Cyc-maltodext_C PF10438.9 ORF67062 - 0.028 14.5 0.0 0.053 13.6 0.0 1.5 1 0 0 1 1 1 0 Cyclo-malto-dextrinase C-terminal domain zf-RING_2 PF13639.6 ORF61546 - 2.4e-09 37.4 10.4 3.4e-09 36.9 10.4 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF61546 - 9.2e-06 25.9 10.5 5e-05 23.5 10.5 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF61546 - 0.00012 21.9 8.4 0.00018 21.4 8.4 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF61546 - 0.0023 17.8 6.7 0.0035 17.2 6.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF61546 - 0.012 15.5 10.1 0.022 14.6 10.1 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF61546 - 0.014 15.3 10.1 0.034 14.0 10.1 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF61546 - 0.04 14.1 8.3 0.22 11.7 8.3 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF61546 - 0.062 13.2 10.0 1.2 9.1 10.3 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-P11 PF03854.14 ORF61546 - 0.064 12.9 6.3 0.079 12.6 3.3 2.1 2 0 0 2 2 2 0 P-11 zinc finger RINGv PF12906.7 ORF61546 - 0.099 12.8 9.4 0.19 11.8 9.4 1.5 1 0 0 1 1 1 0 RING-variant domain Zn_ribbon_17 PF17120.5 ORF61546 - 0.1 12.2 7.2 0.2 11.3 7.2 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF61546 - 0.13 12.3 6.6 0.45 10.6 6.6 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF61546 - 1 9.4 9.3 0.4 10.7 5.1 2.2 1 1 1 2 2 2 0 RING-type zinc-finger zf-RING_11 PF17123.5 ORF61546 - 2.2 8.1 14.3 0.12 12.1 8.6 1.9 2 0 0 2 2 2 0 RING-like zinc finger Palm_thioest PF02089.15 ORF6082 - 1.2e-45 156.3 0.0 1.3e-45 156.1 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Bac_export_2 PF01312.19 ORF58572 - 0.51 9.5 3.7 3.4 6.8 3.7 1.9 1 1 0 1 1 1 0 FlhB HrpN YscU SpaS Family ABC2_membrane_3 PF12698.7 ORF58572 - 2.8 6.9 12.8 4 6.5 12.8 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF1761 PF08570.10 ORF58572 - 5 7.4 9.9 0.96 9.7 4.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1761) Proton_antipo_C PF01010.19 ORF55611 - 0.047 13.3 0.1 0.061 12.9 0.1 1.2 1 0 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SLC35F PF06027.12 ORF54914 - 3.3e-46 158.2 11.3 3.7e-46 158.0 11.3 1.0 1 0 0 1 1 1 1 Solute carrier family 35 EamA PF00892.20 ORF54914 - 7.9e-09 35.8 10.8 7.8e-07 29.3 3.9 2.0 2 0 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 ORF54914 - 4e-05 23.0 8.0 7.1e-05 22.2 8.0 1.4 1 1 0 1 1 1 1 UAA transporter family CRT-like PF08627.10 ORF54914 - 0.00034 19.7 0.7 0.00068 18.7 0.7 1.7 1 1 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like PigN PF04987.14 ORF54914 - 0.0017 17.3 7.7 0.19 10.6 1.7 2.1 2 0 0 2 2 2 2 Phosphatidylinositolglycan class N (PIG-N) Met_10 PF02475.16 ORF54895 - 2.4e-15 56.8 0.0 6.3e-15 55.5 0.0 1.8 2 1 0 2 2 2 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 ORF54895 - 0.0047 16.6 0.0 0.0076 15.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 ORF54895 - 0.019 15.7 0.0 0.071 13.8 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain PRMT5 PF05185.16 ORF54895 - 0.033 14.0 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase TPMT PF05724.11 ORF54895 - 0.042 13.5 0.0 0.065 12.9 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) COPI_assoc PF08507.10 ORF54380 - 0.0027 17.8 10.3 0.0027 17.8 10.3 1.7 2 0 0 2 2 2 1 COPI associated protein Arteri_Gl PF00951.18 ORF54380 - 7.3 6.4 11.0 0.6 9.9 4.8 2.4 2 1 0 2 2 2 0 Arterivirus GL envelope glycoprotein WWE PF02825.20 ORF53891 - 0.00027 21.4 0.7 0.51 11.0 0.1 2.6 2 1 0 2 2 2 2 WWE domain REV PF00424.18 ORF53891 - 0.17 11.9 0.2 0.35 10.9 0.2 1.5 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) ANAPC4_WD40 PF12894.7 ORF53574 - 5e-07 29.9 0.0 0.011 16.0 0.0 3.3 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF53574 - 1.4e-06 28.9 1.6 0.0032 18.3 0.1 3.4 3 0 0 3 3 3 2 WD domain, G-beta repeat WD40_like PF17005.5 ORF53574 - 0.00034 20.1 3.1 0.068 12.5 1.9 2.4 1 1 2 3 3 3 3 WD40-like domain RCC1_2 PF13540.6 ORF5229 - 3.1e-10 39.6 4.8 0.05 13.4 0.2 4.4 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Crystall PF00030.19 ORF5229 - 0.035 14.3 0.2 0.64 10.3 0.1 2.7 1 1 1 3 3 3 0 Beta/Gamma crystallin Cas_GSU0053 PF09617.10 ORF5229 - 0.087 12.8 0.0 0.15 12.0 0.0 1.4 1 1 0 1 1 1 0 CRISPR-associated protein GSU0053 (Cas_GSU0053) Ion_trans PF00520.31 ORF52259 - 2.7e-21 75.9 8.4 3.1e-21 75.7 8.4 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF52259 - 0.57 8.8 13.1 0.83 8.3 0.3 2.1 1 1 1 2 2 2 0 Polycystin cation channel Zn_peptidase_2 PF04298.12 ORF52259 - 0.8 9.1 6.2 1.3 8.4 6.2 1.2 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase Hydrolase_4 PF12146.8 ORF50212 - 1.3e-11 44.2 0.1 2.6e-11 43.3 0.0 1.4 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF50212 - 2.7e-11 44.5 1.4 3.4e-11 44.2 1.4 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF50212 - 5.6e-09 36.0 0.0 1.7e-07 31.2 0.1 2.0 1 1 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF50212 - 0.0051 16.9 0.1 0.17 12.0 0.0 2.3 2 0 0 2 2 2 1 TAP-like protein Esterase PF00756.20 ORF50212 - 0.018 14.7 0.0 0.022 14.4 0.0 1.2 1 0 0 1 1 1 0 Putative esterase Abhydrolase_2 PF02230.16 ORF50212 - 0.22 11.3 0.0 0.33 10.7 0.0 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase TUDOR PF00567.24 ORF45668 - 1.1e-18 67.4 0.0 2.9e-18 66.1 0.0 1.7 2 0 0 2 2 2 1 Tudor domain SNase PF00565.17 ORF45668 - 7.8e-09 36.0 0.0 1.3e-08 35.3 0.0 1.4 1 0 0 1 1 1 1 Staphylococcal nuclease homologue SMN PF06003.12 ORF45668 - 0.023 13.9 0.0 0.038 13.3 0.0 1.3 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) Agenet PF05641.12 ORF45668 - 0.072 13.6 0.0 0.17 12.4 0.0 1.6 1 0 0 1 1 1 0 Agenet domain NAD_binding_1 PF00175.21 ORF44768 - 1.2e-24 87.0 0.0 4.6e-24 85.2 0.0 1.9 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF44768 - 4.2e-14 52.7 0.0 6.6e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF44768 - 1.1e-07 32.2 0.0 9.7e-07 29.0 0.0 2.0 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF44768 - 0.071 13.5 0.3 0.12 12.8 0.3 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Tyr-DNA_phospho PF06087.12 ORF42711 - 3.7e-20 72.2 0.1 2.5e-09 36.6 0.0 2.0 2 0 0 2 2 2 2 Tyrosyl-DNA phosphodiesterase Aldedh PF00171.22 ORF42392 - 1.8e-76 257.5 0.1 2e-76 257.4 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Aldedh PF00171.22 ORF40292 - 9.7e-77 258.4 0.0 1.1e-76 258.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Folate_rec PF03024.14 ORF37037 - 0.0069 16.3 0.3 0.0098 15.8 0.3 1.4 1 0 0 1 1 1 1 Folate receptor family DUF3827 PF12877.7 ORF37002 - 0.033 12.6 0.3 0.043 12.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Ank_2 PF12796.7 ORF35558 - 5.5e-10 39.7 0.0 2e-09 37.9 0.0 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF35558 - 3.5e-07 30.6 0.1 0.0019 18.7 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF35558 - 9.7e-07 29.0 0.4 0.48 11.0 0.0 3.7 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF35558 - 1e-05 25.7 1.1 0.00083 19.6 0.1 2.5 1 1 2 3 3 3 2 Ankyrin repeats (many copies) PKD_channel PF08016.12 ORF34745 - 0.012 14.3 1.3 0.016 13.9 1.3 1.1 1 0 0 1 1 1 0 Polycystin cation channel MFS_1 PF07690.16 ORF34725 - 1.5e-18 66.9 17.0 4.9e-18 65.2 12.3 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 ORF34725 - 0.029 12.6 3.9 0.017 13.4 0.7 1.9 2 0 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family MatE PF01554.18 ORF32511 - 2.5e-07 30.5 24.5 1.7e-06 27.8 22.2 2.6 1 1 1 2 2 2 1 MatE Pex19 PF04614.12 ORF23593 - 0.23 11.2 10.9 0.59 9.9 10.9 1.7 1 1 0 1 1 1 0 Pex19 protein family Gelsolin PF00626.22 ORF21687 - 9.1e-25 86.4 0.0 5.2e-16 58.3 0.0 2.1 2 0 0 2 2 2 2 Gelsolin repeat DUF3844 PF12955.7 ORF21421 - 0.3 11.3 0.0 0.3 11.3 0.0 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF3844) Ycf70 PF17382.2 ORF21421 - 0.39 11.1 4.8 2.2 8.7 0.6 2.4 1 1 1 2 2 2 0 Uncharacterized Ycf70-like DUF4013 PF13197.6 ORF21421 - 2.1 8.2 14.6 3.9 7.3 14.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4013) DUF4064 PF13273.6 ORF21421 - 6 7.2 15.4 0.37 11.1 7.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) AhpC-TSA_2 PF13911.6 ORF21232 - 7.3e-13 48.6 0.0 2e-12 47.2 0.0 1.7 1 1 0 1 1 1 1 AhpC/TSA antioxidant enzyme Pkinase PF00069.25 ORF18227 - 4.7e-34 117.9 0.3 5.9e-34 117.6 0.3 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18227 - 4.3e-23 81.9 0.0 5.1e-23 81.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF18227 - 9.4e-10 38.2 0.0 1.5e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF18227 - 0.00012 22.1 0.0 0.00073 19.5 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF18227 - 0.00012 21.2 0.5 0.00073 18.6 0.5 2.0 1 1 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF18227 - 0.00023 20.1 0.0 0.00041 19.3 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF18227 - 0.00071 19.2 0.2 0.0041 16.7 0.0 2.0 1 1 1 2 2 2 1 RIO1 family Choline_kinase PF01633.20 ORF18227 - 0.00099 18.8 0.1 0.0019 17.8 0.1 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase Kinase-like PF14531.6 ORF18227 - 0.0052 16.1 0.0 0.0074 15.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like FTA2 PF13095.6 ORF18227 - 0.0077 15.9 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Seadorna_VP7 PF07387.11 ORF18227 - 0.053 12.6 0.2 0.093 11.8 0.0 1.6 2 0 0 2 2 2 0 Seadornavirus VP7 HisKA PF00512.25 ORF17012 - 0.00096 19.1 0.0 0.0021 18.0 0.0 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain SatD PF16264.5 ORF17012 - 0.036 13.7 2.3 0.066 12.8 0.0 2.0 1 1 1 2 2 2 0 SatD family (SatD) ATP_bind_1 PF03029.17 ORF16700 - 1.5e-31 110.0 0.0 2.3e-31 109.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 ORF16700 - 0.0052 16.4 0.0 0.0087 15.6 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain DUF3450 PF11932.8 ORF16700 - 0.0085 15.4 0.1 0.066 12.5 0.0 2.2 1 1 2 3 3 3 1 Protein of unknown function (DUF3450) MAAL_C PF07476.11 ORF16700 - 0.013 14.7 0.0 0.017 14.3 0.0 1.1 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Bromo_TP PF07524.13 ORF16700 - 0.023 14.7 0.1 0.18 11.8 0.0 2.1 1 1 1 2 2 2 0 Bromodomain associated FlaC_arch PF05377.11 ORF16700 - 0.058 13.8 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) GrpE PF01025.19 ORF16700 - 0.088 12.5 0.4 2.5 7.7 0.0 2.0 2 0 0 2 2 2 0 GrpE Rox3 PF08633.10 ORF12948 - 0.095 13.0 0.2 0.12 12.6 0.2 1.3 1 0 0 1 1 1 0 Rox3 mediator complex subunit SAP PF02037.27 ORF12245 - 0.018 14.8 0.3 0.028 14.2 0.3 1.3 1 0 0 1 1 1 0 SAP domain FANC_SAP PF18081.1 ORF12245 - 0.02 15.1 0.0 0.043 14.0 0.0 1.6 1 0 0 1 1 1 0 Fanconi anemia-associated nuclease SAP domain SWIM PF04434.17 ORF12245 - 0.14 11.9 2.0 0.26 11.0 2.0 1.4 1 0 0 1 1 1 0 SWIM zinc finger EIF_2_alpha PF07541.12 ORF12080 - 9.9e-13 48.2 0.0 1.7e-12 47.4 0.0 1.4 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 ORF12080 - 1.8e-10 41.0 0.4 3.1e-10 40.3 0.4 1.3 1 0 0 1 1 1 1 S1 RNA binding domain MGDG_synth PF06925.11 ORF12080 - 0.11 12.6 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Monogalactosyldiacylglycerol (MGDG) synthase Cadherin_C_2 PF16492.5 ORF12045 - 0.0051 17.5 0.3 0.18 12.6 0.1 2.5 1 1 1 2 2 2 1 Cadherin cytoplasmic C-terminal ubiquitin PF00240.23 ORF1130 - 2.4e-18 65.7 1.7 5.3e-18 64.5 1.7 1.5 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF1130 - 1.9e-07 30.8 3.5 3.6e-07 29.9 3.5 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF1130 - 6.4e-05 23.5 1.7 9.6e-05 22.9 0.5 1.9 2 0 0 2 2 2 1 DUF2407 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF1130 - 0.00019 21.7 2.9 0.00019 21.7 2.9 1.7 2 0 0 2 2 2 1 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF1130 - 0.0031 17.4 0.2 0.0057 16.6 0.2 1.5 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain UN_NPL4 PF11543.8 ORF1130 - 0.007 16.8 0.1 0.017 15.6 0.1 1.6 1 0 0 1 1 1 1 Nuclear pore localisation protein NPL4 Rad60-SLD_2 PF13881.6 ORF1130 - 0.071 13.2 0.2 0.13 12.4 0.2 1.5 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF1130 - 0.31 11.1 4.5 1.9 8.6 0.7 2.4 1 1 1 2 2 2 0 Ubiquitin-like domain TPR_2 PF07719.17 ORF112495 - 0.0014 18.6 0.2 0.023 14.8 0.1 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF112495 - 0.0082 16.5 0.2 8.3 7.0 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF112495 - 0.017 14.9 0.2 0.052 13.4 0.2 1.9 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF112495 - 0.034 15.0 0.0 6.7 7.8 0.0 2.8 2 1 1 3 3 3 0 Tetratricopeptide repeat RCC1_2 PF13540.6 ORF110973 - 3.1e-10 39.6 4.8 0.05 13.4 0.2 4.4 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Crystall PF00030.19 ORF110973 - 0.035 14.3 0.2 0.64 10.3 0.1 2.7 1 1 1 3 3 3 0 Beta/Gamma crystallin Cas_GSU0053 PF09617.10 ORF110973 - 0.087 12.8 0.0 0.15 12.0 0.0 1.4 1 1 0 1 1 1 0 CRISPR-associated protein GSU0053 (Cas_GSU0053) DUF1980 PF09323.10 ORF109292 - 6.9 6.6 8.0 0.92 9.4 0.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) Ank_2 PF12796.7 ORF108056 - 3.9e-41 139.5 3.0 6.9e-15 55.4 0.3 2.9 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF108056 - 1.1e-26 89.9 3.2 5.3e-06 26.4 0.1 5.9 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF108056 - 9.5e-26 89.5 5.8 5.5e-10 39.3 0.1 4.3 1 1 4 5 5 5 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF108056 - 1.2e-24 86.3 10.1 1.2e-07 32.1 0.3 4.8 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF108056 - 1.2e-23 82.5 9.6 3.1e-05 24.2 0.1 6.2 6 0 0 6 6 6 5 Ankyrin repeat Ammonium_transp PF00909.21 ORF107096 - 5.1e-38 130.8 7.9 5.7e-38 130.6 7.9 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family ABC_tran PF00005.27 ORF10626 - 1.1e-12 48.7 0.2 1.2e-11 45.3 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF10626 - 0.028 14.2 0.2 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 ORF10626 - 0.1 12.8 0.1 1.2 9.4 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Methyltransf_3 PF01596.17 ORF105605 - 0.00047 19.4 0.0 0.0008 18.6 0.0 1.4 1 0 0 1 1 1 1 O-methyltransferase SUKH_5 PF14567.6 ORF105605 - 0.017 14.9 0.0 0.021 14.6 0.0 1.3 1 1 0 1 1 1 0 SMI1-KNR4 cell-wall ABC_membrane PF00664.23 ORF104710 - 4.3e-26 92.2 4.3 5.1e-26 91.9 4.3 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Pex24p PF06398.11 ORF104710 - 0.25 10.3 4.4 0.33 9.9 4.4 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Insulin_TMD PF17870.1 ORF104710 - 4.8 7.3 7.5 25 5.0 3.5 3.0 2 1 1 3 3 3 0 Insulin receptor trans-membrane segment Phage_GP20 PF06810.11 ORF103468 - 0.028 14.2 4.0 0.051 13.4 4.0 1.4 1 0 0 1 1 1 0 Phage minor structural protein GP20 CBS PF00571.28 ORF103367 - 0.0023 18.3 0.0 1.8 9.1 0.0 2.2 2 0 0 2 2 2 2 CBS domain BAGE PF08180.11 ORF103367 - 0.1 12.7 1.6 0.31 11.2 1.6 1.9 1 1 0 1 1 1 0 B melanoma antigen family Tyr-DNA_phospho PF06087.12 ORF103313 - 3.7e-20 72.2 0.1 2.5e-09 36.6 0.0 2.0 2 0 0 2 2 2 2 Tyrosyl-DNA phosphodiesterase ERO1 PF04137.15 ORF100862 - 4.4e-39 134.7 5.7 5.2e-39 134.4 5.7 1.0 1 0 0 1 1 1 1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) DNMT1-RFD PF12047.8 ORF100862 - 0.052 13.6 3.4 0.54 10.3 0.5 2.4 2 1 0 2 2 2 0 Cytosine specific DNA methyltransferase replication foci domain F-box_5 PF18511.1 ORF10077 - 0.0049 16.4 0.2 0.069 12.7 0.0 2.3 2 0 0 2 2 2 1 F-box F-box-like PF12937.7 ORF10077 - 0.1 12.5 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 F-box-like F-box PF00646.33 ORF10077 - 0.13 12.2 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 F-box domain Peptidase_M22 PF00814.25 NODE_33601_length_646_cov_3.163666_g26773_i0forward_frame_1 - 8.5e-28 97.8 0.0 1.1e-27 97.5 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family Endonuc-HincII PF09226.11 NODE_33584_length_646_cov_105.726678_g26755_i1forward_frame_1 - 0.099 11.9 0.0 0.17 11.1 0.0 1.5 2 0 0 2 2 2 0 Restriction endonuclease HincII Endonuc-HincII PF09226.11 NODE_33582_length_646_cov_108.731588_g26755_i0forward_frame_1 - 0.13 11.6 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Restriction endonuclease HincII Zip PF02535.22 NODE_33581_length_646_cov_113.536825_g26754_i0reverse_frame_1 - 1.3 8.2 2.8 1.7 7.8 2.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter SLAC1 PF03595.17 NODE_33553_length_647_cov_2.991830_g26734_i0forward_frame_1 - 1.1e-20 74.2 15.5 1.3e-20 73.9 15.5 1.1 1 0 0 1 1 1 1 Voltage-dependent anion channel PhoR PF11808.8 NODE_33553_length_647_cov_2.991830_g26734_i0forward_frame_1 - 7 7.1 12.2 2.9 8.3 0.6 3.4 2 1 2 4 4 4 0 Phosphate regulon sensor protein PhoR BDV_P24 PF06595.11 NODE_33530_length_647_cov_128.941176_g26711_i0reverse_frame_1 - 0.095 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Borna disease virus P24 protein Fn3-like PF14310.6 NODE_33530_length_647_cov_128.941176_g26711_i0forward_frame_1 - 0.0074 16.4 0.0 0.014 15.5 0.0 1.4 1 0 0 1 1 1 1 Fibronectin type III-like domain DNA_primase_S PF01896.19 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_1 - 0.029 14.4 1.7 0.036 14.1 1.7 1.2 1 0 0 1 1 1 0 DNA primase small subunit SelR PF01641.18 NODE_33515_length_647_cov_447.874183_g26697_i0forward_frame_1 - 9.2e-16 58.0 0.2 1.5e-15 57.3 0.2 1.3 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 NODE_33515_length_647_cov_447.874183_g26697_i0forward_frame_1 - 0.019 15.1 0.1 0.042 14.1 0.1 1.5 1 0 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Serine_protease PF18405.1 NODE_33487_length_648_cov_133.342577_g26674_i0forward_frame_1 - 0.12 11.5 0.1 0.16 11.1 0.1 1.2 1 0 0 1 1 1 0 Gammaproteobacterial serine protease DUF3119 PF11317.8 NODE_33481_length_648_cov_228.941272_g26669_i0reverse_frame_1 - 2.3e-33 115.1 0.0 3e-33 114.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3119) Promethin PF16015.5 NODE_33481_length_648_cov_228.941272_g26669_i0reverse_frame_1 - 1.1 9.2 5.6 1.6 8.7 5.6 1.2 1 0 0 1 1 1 0 Promethin Pro_isomerase PF00160.21 NODE_33474_length_648_cov_372.921697_g26662_i0reverse_frame_1 - 2.4e-42 144.9 0.0 3.9e-42 144.2 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AP3D1 PF06375.11 NODE_33474_length_648_cov_372.921697_g26662_i0reverse_frame_1 - 0.098 12.9 8.3 0.13 12.5 8.3 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DDE_Tnp_4 PF13359.6 NODE_33463_length_648_cov_4327.977162_g19647_i4reverse_frame_1 - 0.067 12.8 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 DDE superfamily endonuclease ESP PF16590.5 NODE_33463_length_648_cov_4327.977162_g19647_i4forward_frame_1 - 0.044 14.1 0.1 0.062 13.6 0.1 1.3 1 0 0 1 1 1 0 Exocrine gland-secreting peptide SpoVR PF04293.13 NODE_33458_length_649_cov_3.615635_g26650_i0forward_frame_3 - 6.8e-35 120.5 0.2 8.4e-35 120.3 0.2 1.1 1 0 0 1 1 1 1 SpoVR like protein His_Phos_1 PF00300.22 NODE_33448_length_649_cov_93.799674_g26640_i0reverse_frame_2 - 0.12 12.0 0.0 0.33 10.6 0.0 1.7 2 0 0 2 2 2 0 Histidine phosphatase superfamily (branch 1) Gamma-thionin PF00304.20 NODE_33443_length_649_cov_108.550489_g6149_i3forward_frame_2 - 0.093 13.0 2.3 0.16 12.3 2.3 1.4 1 0 0 1 1 1 0 Gamma-thionin family RE_MamI PF09567.10 NODE_33405_length_650_cov_84.429268_g26602_i0forward_frame_2 - 0.15 11.7 0.4 0.81 9.3 0.2 1.9 2 0 0 2 2 2 0 MamI restriction endonuclease DUF2344 PF10105.9 NODE_33377_length_650_cov_756.432520_g24706_i1forward_frame_2 - 0.028 14.3 2.1 0.044 13.6 2.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) Ribosomal_L18A PF01775.17 NODE_33375_length_650_cov_5212.697561_g21797_i1reverse_frame_2 - 1.8e-43 147.5 6.0 1.8e-43 147.5 6.0 1.8 2 0 0 2 2 2 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A YtfJ_HI0045 PF09695.10 NODE_33375_length_650_cov_5212.697561_g21797_i1reverse_frame_2 - 0.0028 17.3 0.4 0.0046 16.6 0.4 1.4 1 0 0 1 1 1 1 Bacterial protein of unknown function (YtfJ_HI0045) DUF2887 PF11103.8 NODE_33375_length_650_cov_5212.697561_g21797_i1reverse_frame_2 - 0.02 14.9 0.7 0.04 13.9 0.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2887) DUF2477 PF10631.9 NODE_33373_length_651_cov_2.649351_g26573_i0reverse_frame_3 - 0.2 12.3 6.5 0.3 11.8 6.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2477) Peptidase_S49_N PF08496.10 NODE_33373_length_651_cov_2.649351_g26573_i0forward_frame_3 - 4.9e-54 182.5 4.3 6.8e-54 182.1 4.3 1.2 1 0 0 1 1 1 1 Peptidase family S49 N-terminal Peptidase_S49 PF01343.18 NODE_33373_length_651_cov_2.649351_g26573_i0forward_frame_3 - 2.1e-24 86.2 1.7 2.2e-24 86.1 0.0 1.8 2 0 0 2 2 2 1 Peptidase family S49 SDH_sah PF01972.16 NODE_33373_length_651_cov_2.649351_g26573_i0forward_frame_3 - 6.7e-06 25.3 2.0 1.2e-05 24.5 0.0 2.0 2 0 0 2 2 2 1 Serine dehydrogenase proteinase LodA_N PF17990.1 NODE_33373_length_651_cov_2.649351_g26573_i0forward_frame_3 - 0.034 14.1 0.1 0.049 13.6 0.1 1.2 1 0 0 1 1 1 0 L-Lysine epsilon oxidase N-terminal MEF2_binding PF09047.10 NODE_33370_length_651_cov_3.875000_g26570_i0reverse_frame_2 - 0.051 13.4 1.3 0.11 12.4 0.5 2.0 2 0 0 2 2 2 0 MEF2 binding CCDC53 PF10152.9 NODE_33368_length_651_cov_5.672078_g26568_i0reverse_frame_3 - 0.25 11.8 1.2 0.38 11.2 0.8 1.4 1 1 0 1 1 1 0 Subunit CCDC53 of WASH complex CRT-like PF08627.10 NODE_33359_length_651_cov_98.659091_g26559_i0forward_frame_2 - 0.022 13.7 0.0 0.033 13.2 0.0 1.2 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like DUF2457 PF10446.9 NODE_33352_length_651_cov_130.040584_g18435_i2forward_frame_3 - 0.14 11.3 0.3 0.16 11.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Ribosomal_TL5_C PF14693.6 NODE_33350_length_651_cov_133.438312_g26551_i0reverse_frame_3 - 0.16 12.3 0.0 0.24 11.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein TL5, C-terminal domain EF-hand_1 PF00036.32 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 2.1e-25 86.3 14.0 3.2e-06 26.3 0.2 5.2 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 1.2e-21 77.0 5.3 9.2e-13 48.5 1.0 3.1 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 1.2e-19 68.9 15.6 2.3e-05 23.6 0.4 5.3 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 1.7e-19 68.0 8.4 2e-05 24.2 0.1 5.1 4 1 1 5 5 5 4 EF-hand domain SPARC_Ca_bdg PF10591.9 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 1.5e-08 34.9 0.4 0.0028 18.0 0.1 2.5 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 3.3e-08 33.2 10.9 0.00077 19.3 2.6 4.6 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 0.0011 18.8 6.1 0.38 10.7 1.6 3.7 1 1 3 4 4 4 1 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 0.019 15.1 3.3 13 6.1 4.2 3.1 2 1 0 2 2 2 0 Dockerin type I domain EF-hand_9 PF14658.6 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 0.021 15.1 0.2 0.49 10.8 0.0 2.9 2 2 1 3 3 3 0 EF-hand domain Caleosin PF05042.13 NODE_33326_length_651_cov_4406.798701_g21165_i7forward_frame_3 - 0.025 14.5 0.8 10 6.0 0.0 3.8 1 1 4 5 5 5 0 Caleosin related protein zf-AN1 PF01428.16 NODE_33320_length_651_cov_41372.818182_g26527_i0reverse_frame_3 - 1.6e-09 37.7 11.5 1.6e-09 37.7 11.5 2.3 3 0 0 3 3 3 1 AN1-like Zinc finger zf-A20 PF01754.16 NODE_33320_length_651_cov_41372.818182_g26527_i0reverse_frame_3 - 0.0054 16.7 0.7 0.0054 16.7 0.7 2.9 4 0 0 4 4 4 1 A20-like zinc finger Aminotran_4 PF01063.19 ORF97891 - 9.6e-40 136.8 0.0 1.2e-39 136.5 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV Presenilin PF01080.17 ORF95633 - 1.6 7.4 11.5 1.8 7.3 11.5 1.3 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 ORF95633 - 2.9 6.1 21.9 3.6 5.8 21.9 1.2 1 0 0 1 1 1 0 CDC45-like protein Ndc1_Nup PF09531.10 ORF95633 - 8.3 5.0 5.5 8.7 4.9 5.5 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PA14 PF07691.12 ORF95287 - 3.7e-13 49.5 0.5 5.5e-13 49.0 0.5 1.2 1 0 0 1 1 1 1 PA14 domain DUF4215 PF13948.6 ORF95287 - 9.5 6.7 9.3 0.82 10.2 0.7 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4215) Phage_holin_3_6 PF07332.11 ORF95235 - 0.02 14.9 2.8 0.02 14.9 2.8 1.6 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III APH PF01636.23 ORF94582 - 1.7e-10 41.2 0.0 2e-10 41.0 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF94582 - 0.018 14.4 0.0 0.023 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Choline_kinase PF01633.20 ORF94582 - 0.19 11.3 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase WD40 PF00400.32 ORF94309 - 7.4e-06 26.6 1.2 0.00067 20.4 0.0 3.3 4 0 0 4 4 4 1 WD domain, G-beta repeat MORN PF02493.20 ORF94164 - 1.9e-08 33.7 4.1 0.0029 17.4 0.1 2.4 2 0 0 2 2 2 2 MORN repeat Rubredoxin PF00301.20 ORF94164 - 0.008 16.2 0.1 0.019 15.0 0.1 1.6 1 0 0 1 1 1 1 Rubredoxin Peptidase_M14 PF00246.24 ORF93437 - 1.1e-09 38.5 0.0 2.1e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Zinc carboxypeptidase PRKCSH-like PF12999.7 ORF93437 - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Glucosidase II beta subunit-like LCE PF14672.6 ORF9152 - 0.032 14.8 8.1 0.5 11.0 1.0 2.5 2 0 0 2 2 2 0 Late cornified envelope HATPase_c PF02518.26 ORF90011 - 1.7e-12 47.8 0.9 2.7e-12 47.2 0.1 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF90011 - 4.4e-10 39.5 0.1 1.2e-09 38.0 0.1 1.9 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF90011 - 0.012 15.5 0.0 0.023 14.5 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH PF00307.31 ORF89961 - 2.4e-07 30.9 0.0 4.5e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 Calponin homology (CH) domain KASH_CCD PF14662.6 ORF89961 - 2e-05 24.5 3.1 0.00028 20.7 0.5 2.1 2 0 0 2 2 2 1 Coiled-coil region of CCDC155 or KASH TPR_MLP1_2 PF07926.12 ORF89961 - 0.0081 16.2 5.3 0.079 13.0 1.1 2.2 2 0 0 2 2 2 1 TPR/MLP1/MLP2-like protein TSC22 PF01166.18 ORF89961 - 0.03 14.6 7.1 0.041 14.2 0.3 2.8 2 1 0 2 2 2 0 TSC-22/dip/bun family YabA PF06156.13 ORF89961 - 0.043 14.4 1.0 0.29 11.8 0.2 2.2 2 0 0 2 2 2 0 Initiation control protein YabA ZapB PF06005.12 ORF89961 - 0.087 13.3 5.3 0.26 11.8 0.8 2.4 2 0 0 2 2 2 0 Cell division protein ZapB DUF2381 PF09544.10 ORF89961 - 0.15 11.5 6.6 0.37 10.3 1.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2381) DUF5595 PF18077.1 ORF89961 - 0.83 9.8 4.1 8.7 6.5 0.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5595) Spc24 PF08286.11 ORF89961 - 3.2 8.0 6.3 10 6.4 0.1 2.8 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 TPR_2 PF07719.17 ORF89772 - 1.1e-06 28.2 1.3 0.04 14.0 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF89772 - 0.00028 20.5 0.0 0.011 15.4 0.0 2.3 2 0 0 2 2 2 1 TPR repeat TPR_16 PF13432.6 ORF89772 - 0.00032 21.3 0.2 0.013 16.1 0.0 2.4 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF89772 - 0.00094 18.9 0.2 0.011 15.5 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF89772 - 0.026 14.9 0.1 0.055 13.9 0.1 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF89772 - 0.043 14.1 0.2 0.087 13.1 0.2 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Axin_b-cat_bind PF08833.10 ORF89772 - 7.6 6.7 12.4 0.32 11.1 5.4 2.4 2 1 0 2 2 2 0 Axin beta-catenin binding domain Abhydrolase_4 PF08386.10 ORF89432 - 0.12 12.6 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein START PF01852.19 ORF8899 - 0.0073 15.7 0.0 0.0096 15.4 0.0 1.2 1 0 0 1 1 1 1 START domain DUF5559 PF17714.1 ORF86493 - 0.015 15.2 0.1 0.026 14.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5559) Pyr_redox_dim PF02852.22 ORF85352 - 1.1e-26 93.3 0.0 1.5e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_2 PF07992.14 ORF85352 - 2.1e-07 30.5 0.0 2.8e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DUF4152 PF13680.6 ORF85352 - 0.013 14.9 0.0 0.025 14.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4152) P3A PF08727.11 ORF84872 - 0.19 11.1 0.4 0.44 10.0 0.0 1.7 2 0 0 2 2 2 0 Poliovirus 3A protein like CCSAP PF15748.5 ORF84770 - 1 9.4 45.6 1.7 8.8 45.6 1.3 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated CDC27 PF09507.10 ORF84770 - 1.4 8.2 51.0 1.6 8.0 51.0 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Zip PF02535.22 ORF84770 - 4.7 6.3 32.0 0.0093 15.2 5.6 2.1 1 1 1 2 2 2 0 ZIP Zinc transporter ubiquitin PF00240.23 ORF8320 - 1.6e-33 114.3 0.3 3.3e-33 113.3 0.3 1.6 1 0 0 1 1 1 1 Ubiquitin family Sod_Ni PF09055.11 ORF8320 - 3e-29 102.1 0.6 5.1e-29 101.4 0.6 1.3 1 0 0 1 1 1 1 Nickel-containing superoxide dismutase Rad60-SLD PF11976.8 ORF8320 - 2e-15 56.3 1.1 4.1e-15 55.4 0.7 1.8 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF8320 - 0.00012 22.4 0.1 0.00046 20.6 0.1 1.9 1 1 0 1 1 1 1 Ubiquitin-like domain MobC PF05713.11 ORF8320 - 0.00045 20.6 2.0 0.0024 18.3 0.1 2.8 2 1 0 3 3 3 1 Bacterial mobilisation protein (MobC) Ubiquitin_5 PF18037.1 ORF8320 - 0.011 16.1 0.5 0.028 14.8 0.0 1.9 2 0 0 2 2 2 0 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF8320 - 0.011 15.6 0.0 0.021 14.7 0.0 1.4 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF8320 - 0.012 15.7 0.2 0.083 13.0 0.0 2.3 1 1 0 2 2 2 0 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF8320 - 0.066 13.8 0.0 0.082 13.5 0.0 1.6 1 1 0 1 1 1 0 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF8320 - 0.25 11.4 3.2 15 5.7 0.0 2.9 3 0 0 3 3 3 0 Ubiquitin-like domain Peptidase_M17 PF00883.21 ORF81133 - 2.7e-72 243.7 0.2 3.1e-72 243.5 0.2 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain ATG27 PF09451.10 ORF80605 - 0.003 17.5 0.0 0.0039 17.1 0.0 1.2 1 0 0 1 1 1 1 Autophagy-related protein 27 Apolipoprotein PF01442.18 ORF80605 - 0.025 14.4 1.5 0.11 12.4 1.5 2.1 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain MDMPI_N PF11716.8 ORF80605 - 0.099 13.3 1.5 0.19 12.4 1.5 1.5 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain Virul_fac_BrkB PF03631.15 ORF80605 - 0.1 12.2 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Virulence factor BrkB Glyco_hydro_16 PF00722.21 ORF79900 - 0.00016 21.2 0.0 0.0003 20.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 Ribosomal_L13e PF01294.18 ORF78961 - 4.5e-60 202.6 7.4 6.1e-60 202.1 7.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L13e Oxidored_q2 PF00420.24 ORF788 - 2.5e-11 43.1 3.1 2.5e-11 43.1 3.1 2.7 2 2 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF2838 PF10998.8 ORF78708 - 8.1e-17 61.5 18.0 1.1e-16 61.0 18.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) DUF2838 PF10998.8 ORF77248 - 8.1e-17 61.5 18.0 1.1e-16 61.0 18.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) ALG11_N PF15924.5 ORF76876 - 0.028 14.5 0.0 0.042 13.9 0.0 1.2 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus DUF2525 PF10733.9 ORF76876 - 0.076 13.3 0.0 0.14 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2525) OTU PF02338.19 ORF75961 - 3.4e-11 43.7 0.1 7.8e-11 42.6 0.1 1.6 1 1 1 2 2 2 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF75961 - 0.023 14.1 0.4 0.058 12.8 0.1 1.7 1 1 1 2 2 2 0 Peptidase C65 Otubain U1snRNP70_N PF12220.8 ORF75313 - 0.048 14.3 0.3 0.28 11.8 0.1 2.0 2 0 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal PDZ_2 PF13180.6 ORF75313 - 0.15 12.4 0.0 0.29 11.5 0.0 1.5 1 0 0 1 1 1 0 PDZ domain HATPase_c PF02518.26 ORF73471 - 1.7e-12 47.8 0.9 2.7e-12 47.2 0.1 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF73471 - 4.4e-10 39.5 0.1 1.2e-09 38.0 0.1 1.9 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF73471 - 0.012 15.5 0.0 0.023 14.5 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase adh_short PF00106.25 ORF71355 - 3.3e-19 69.1 0.0 4.1e-19 68.8 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF71355 - 1.2e-12 47.9 0.0 1.4e-12 47.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Zip PF02535.22 ORF70776 - 1e-11 44.7 7.2 1.5e-11 44.1 7.2 1.3 1 0 0 1 1 1 1 ZIP Zinc transporter MR_MLE_C PF13378.6 ORF69568 - 3.5e-54 183.7 0.0 3.9e-54 183.5 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like TES PF08034.11 ORF69061 - 2.5 8.4 12.3 0.19 12.1 3.0 2.9 3 0 0 3 3 3 0 Trematode eggshell synthesis protein MFS_1 PF07690.16 ORF68349 - 2e-12 46.7 1.8 2.5e-12 46.4 1.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF68349 - 6.4e-08 31.6 10.1 1.4e-07 30.4 10.1 1.6 1 1 0 1 1 1 1 MFS/sugar transport protein OATP PF03137.20 ORF68349 - 0.016 13.5 0.3 0.016 13.5 0.3 1.4 2 0 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family 2TM PF13239.6 ORF68349 - 0.073 13.4 0.9 8.6 6.7 0.0 2.5 2 0 0 2 2 2 0 2TM domain DUF5313 PF17240.2 ORF68349 - 1.3 9.5 4.3 0.53 10.7 0.2 2.2 2 1 1 3 3 3 0 Family of unknown function (DUF5313) Sec20 PF03908.13 ORF67214 - 4.1e-06 26.6 0.7 4.1e-06 26.6 0.7 2.5 2 1 1 3 3 3 1 Sec20 DASH_Duo1 PF08651.10 ORF67214 - 0.027 14.2 10.2 0.17 11.7 1.8 3.5 3 1 0 3 3 3 0 DASH complex subunit Duo1 DUF2802 PF10975.8 ORF67214 - 0.031 14.4 0.1 0.031 14.4 0.1 3.0 3 2 0 3 3 3 0 Protein of unknown function (DUF2802) DUF1786 PF08735.10 ORF67214 - 0.046 13.0 1.2 0.063 12.6 0.2 1.7 2 0 0 2 2 2 0 Putative pyruvate format-lyase activating enzyme (DUF1786) Synaptobrevin PF00957.21 ORF67214 - 0.048 13.4 0.1 0.048 13.4 0.1 3.3 2 1 2 4 4 4 0 Synaptobrevin RasGAP_C PF03836.15 ORF67214 - 0.33 11.1 23.2 0.73 10.0 5.2 2.4 1 1 1 2 2 2 0 RasGAP C-terminus DUF1664 PF07889.12 ORF67214 - 0.71 9.9 18.7 0.87 9.6 2.6 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Arrestin_C PF02752.22 ORF67214 - 0.81 10.1 4.8 0.34 11.4 1.1 2.0 1 1 1 2 2 2 0 Arrestin (or S-antigen), C-terminal domain SpecificRecomb PF10136.9 ORF67214 - 0.99 7.6 3.7 1.2 7.4 3.7 1.1 1 0 0 1 1 1 0 Site-specific recombinase LMBR1 PF04791.16 ORF67214 - 1.8 7.4 8.8 2.1 7.1 8.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF5089 PF17002.5 ORF67214 - 2 8.3 24.9 0.12 12.2 12.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5089) Fzo_mitofusin PF04799.13 ORF67214 - 3.4 7.2 17.3 1.8 8.1 0.2 3.1 1 1 1 3 3 3 0 fzo-like conserved region DUF4407 PF14362.6 ORF67214 - 5.6 6.2 12.2 9.6 5.5 12.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) YtxH PF12732.7 ORF67214 - 6.6 7.4 12.8 5.7e+03 -2.1 12.8 3.5 1 1 0 1 1 1 0 YtxH-like protein DUF724 PF05266.14 ORF67214 - 7.4 6.3 21.7 2 8.2 10.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) D-ser_dehydrat PF14031.6 ORF66723 - 0.066 13.9 0.0 0.17 12.6 0.0 1.7 1 0 0 1 1 1 0 Putative serine dehydratase domain MORN PF02493.20 ORF66477 - 5.9e-56 183.2 59.2 1e-08 34.5 1.0 9.4 10 0 0 10 10 10 8 MORN repeat DUF3048_C PF17479.2 ORF66477 - 0.49 10.8 18.6 3.6 8.0 0.6 4.2 1 1 2 4 4 4 0 Protein of unknown function (DUF3048) C-terminal domain DUF523 PF04463.12 ORF66477 - 5.1 7.1 5.9 97 3.0 0.1 4.6 1 1 3 5 5 5 0 Protein of unknown function (DUF523) MORN PF02493.20 ORF6638 - 8.4e-31 104.0 30.0 7.4e-08 31.8 3.1 5.7 5 0 0 5 5 5 5 MORN repeat Aconitase PF00330.20 ORF65922 - 6.8e-27 94.6 0.7 1.5e-24 86.9 0.7 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Ketoacyl-synt_C PF02801.22 ORF65922 - 0.032 14.2 0.0 0.09 12.8 0.0 1.6 2 0 0 2 2 2 0 Beta-ketoacyl synthase, C-terminal domain DUF2838 PF10998.8 ORF65491 - 8.1e-17 61.5 18.0 1.1e-16 61.0 18.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) DSPc PF00782.20 ORF65074 - 2.2e-07 30.8 0.0 3.9e-07 29.9 0.0 1.5 1 1 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Methyltransf_23 PF13489.6 ORF63252 - 5.4e-12 45.8 0.0 7.6e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF63252 - 2.2e-11 44.4 0.0 5.2e-10 40.0 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF63252 - 2.1e-09 37.9 0.1 9.9e-09 35.7 0.1 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF63252 - 2.5e-09 37.7 0.1 7.7e-08 32.9 0.1 2.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF63252 - 7.9e-09 35.5 0.0 0.00058 19.7 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase domain DREV PF05219.12 ORF63252 - 9.9e-05 21.6 0.0 0.0012 18.0 0.0 2.0 2 0 0 2 2 2 1 DREV methyltransferase NodS PF05401.11 ORF63252 - 0.00039 20.1 0.0 0.76 9.3 0.0 2.1 2 0 0 2 2 2 2 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 ORF63252 - 0.0056 15.7 0.0 2.1 7.2 0.0 2.2 2 1 0 2 2 2 2 Protein of unknown function (DUF1698) CheR PF01739.18 ORF63252 - 0.071 12.6 0.0 0.13 11.7 0.0 1.6 1 1 0 1 1 1 0 CheR methyltransferase, SAM binding domain SET PF00856.28 ORF61590 - 8.7e-08 32.7 0.1 1.4e-05 25.5 0.1 2.2 1 1 0 1 1 1 1 SET domain HATPase_c PF02518.26 ORF6102 - 1.2e-09 38.7 0.9 3e-09 37.4 0.4 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF6102 - 4.1e-09 36.4 0.4 1.9e-08 34.2 0.0 2.3 2 1 0 2 2 2 1 His Kinase A (phospho-acceptor) domain EF_TS PF00889.19 ORF6102 - 0.065 12.8 0.1 0.19 11.3 0.0 1.8 2 0 0 2 2 2 0 Elongation factor TS DUF5640 PF18692.1 ORF6102 - 0.14 12.2 3.1 0.84 9.7 0.2 2.9 2 1 1 3 3 3 0 Family of unknown function (DUF5640) DUF2838 PF10998.8 ORF60798 - 8.1e-17 61.5 18.0 1.1e-16 61.0 18.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) Aldo_ket_red PF00248.21 ORF59831 - 4.4e-16 58.9 0.1 3.6e-14 52.6 0.1 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family TPR_2 PF07719.17 ORF59557 - 1.1e-06 28.2 1.3 0.04 14.0 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF59557 - 0.00028 20.5 0.0 0.011 15.4 0.0 2.3 2 0 0 2 2 2 1 TPR repeat TPR_16 PF13432.6 ORF59557 - 0.00032 21.3 0.2 0.013 16.1 0.0 2.4 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF59557 - 0.00094 18.9 0.2 0.011 15.5 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF59557 - 0.026 14.9 0.1 0.055 13.9 0.1 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF59557 - 0.043 14.1 0.2 0.087 13.1 0.2 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Axin_b-cat_bind PF08833.10 ORF59557 - 7.6 6.7 12.4 0.32 11.1 5.4 2.4 2 1 0 2 2 2 0 Axin beta-catenin binding domain CSN8_PSD8_EIF3K PF10075.9 ORF59279 - 3.2e-16 59.6 0.2 4.3e-16 59.2 0.2 1.1 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family MtrF PF09472.10 ORF56964 - 0.022 14.2 1.2 0.051 13.0 1.2 1.6 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) TRAM_LAG1_CLN8 PF03798.16 ORF54667 - 1.2e-15 57.8 22.6 1.4e-15 57.5 22.6 1.1 1 0 0 1 1 1 1 TLC domain TRAPP PF04051.16 ORF54667 - 0.022 14.5 0.1 0.036 13.8 0.1 1.2 1 0 0 1 1 1 0 Transport protein particle (TRAPP) component Ephrin_rec_like PF07699.13 ORF51508 - 5e-16 58.2 72.3 0.00028 20.6 3.2 6.3 1 1 8 9 9 9 9 Putative ephrin-receptor like NCD3G PF07562.14 ORF51508 - 2.7e-13 49.6 38.0 0.0015 18.5 5.0 5.4 6 0 0 6 6 6 5 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 ORF51508 - 0.0022 18.3 34.3 0.38 11.2 0.5 7.1 1 1 7 8 8 8 6 TNFR/NGFR cysteine-rich region Opy2 PF09463.10 ORF51508 - 0.091 13.1 47.5 0.59 10.5 5.6 5.6 4 1 2 6 6 6 0 Opy2 protein VSP PF03302.13 ORF51508 - 0.74 8.6 30.5 0.32 9.8 5.8 2.8 1 1 1 2 2 2 0 Giardia variant-specific surface protein LMF1 PF06762.14 ORF48939 - 4.5e-38 131.5 2.1 5.9e-38 131.1 2.1 1.2 1 0 0 1 1 1 1 Lipase maturation factor YscK PF06578.12 ORF48939 - 0.0092 15.5 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 YOP proteins translocation protein K (YscK) Flg_bbr_C PF06429.13 ORF4847 - 0.03 14.5 0.5 0.089 12.9 0.5 1.8 1 0 0 1 1 1 0 Flagellar basal body rod FlgEFG protein C-terminal DASH_Dad4 PF08650.10 ORF4847 - 8.3 6.5 10.4 0.11 12.5 0.9 2.7 4 0 0 4 4 4 0 DASH complex subunit Dad4 DUF728 PF05304.12 ORF48406 - 0.1 12.5 0.3 0.1 12.5 0.3 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF728) BshC PF10079.9 ORF48406 - 1.8 7.2 17.2 0.15 10.8 11.1 1.9 1 1 1 2 2 2 0 Bacillithiol biosynthesis BshC Glucokinase PF02685.16 ORF46807 - 3.4e-84 282.5 0.0 3.8e-84 282.4 0.0 1.0 1 0 0 1 1 1 1 Glucokinase PaaX_C PF08223.11 ORF46807 - 0.015 15.6 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 PaaX-like protein C-terminal domain PfkB PF00294.24 ORF4324 - 2.7e-15 56.5 0.2 6.5e-14 51.9 0.2 2.0 1 1 0 1 1 1 1 pfkB family carbohydrate kinase AdoMet_MTase PF07757.13 ORF4324 - 0.1 12.9 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase Myb_DNA-bind_5 PF13873.6 ORF41177 - 1.7 8.7 6.1 0.59 10.2 0.3 2.9 4 0 0 4 4 4 0 Myb/SANT-like DNA-binding domain Protamine_P2 PF00841.19 ORF38438 - 0.43 11.1 7.7 0.96 10.0 7.7 1.6 1 0 0 1 1 1 0 Sperm histone P2 PGK PF00162.19 ORF35342 - 0.073 12.0 0.0 0.095 11.6 0.0 1.2 1 0 0 1 1 1 0 Phosphoglycerate kinase HATPase_c PF02518.26 ORF33736 - 1.7e-12 47.8 0.9 2.7e-12 47.2 0.1 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF33736 - 4.4e-10 39.5 0.1 1.2e-09 38.0 0.1 1.9 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF33736 - 0.012 15.5 0.0 0.023 14.5 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRR_3 PF07725.12 ORF32759 - 0.13 12.2 2.3 2.7 8.0 0.1 2.4 2 0 0 2 2 2 0 Leucine Rich Repeat DUF4116 PF13475.6 ORF31775 - 7.5e-21 73.6 0.0 7.7e-08 31.9 0.0 4.1 3 1 0 4 4 4 4 Domain of unknown function (DUF4116) bPH_6 PF10756.9 ORF31775 - 2.9 8.0 11.2 6.2 7.0 2.3 3.3 1 1 2 3 3 3 0 Bacterial PH domain Filament PF00038.21 ORF31606 - 0.0018 17.9 6.2 0.013 15.1 1.5 2.2 1 1 0 2 2 2 2 Intermediate filament protein ATG16 PF08614.11 ORF31606 - 0.016 15.4 3.0 0.15 12.3 0.4 2.5 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 ORF31606 - 0.027 14.5 0.1 0.48 10.5 0.2 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fez1 PF06818.15 ORF31606 - 0.07 13.6 0.3 15 6.0 0.0 2.6 1 1 1 2 2 2 0 Fez1 DUF5082 PF16888.5 ORF31606 - 0.077 13.3 2.8 39 4.5 0.3 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF5082) FAM76 PF16046.5 ORF31606 - 0.35 10.2 2.2 8.4 5.6 0.4 2.4 1 1 0 2 2 2 0 FAM76 protein EamA PF00892.20 ORF29611 - 3.5e-16 59.6 14.5 4.1e-16 59.4 14.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family PUNUT PF16913.5 ORF29611 - 0.0026 17.0 2.7 0.0026 17.0 2.7 2.0 1 1 1 2 2 2 1 Purine nucleobase transmembrane transport TPT PF03151.16 ORF29611 - 0.0032 16.9 1.8 0.0032 16.9 1.8 2.0 1 1 1 2 2 2 1 Triose-phosphate Transporter family RseC_MucC PF04246.12 ORF29611 - 0.35 10.8 1.6 0.47 10.4 0.3 1.8 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC BetaGal_dom4_5 PF13364.6 ORF29578 - 0.12 13.0 0.0 0.41 11.2 0.0 1.8 2 1 0 2 2 2 0 Beta-galactosidase jelly roll domain Cyclin_N PF00134.23 ORF25072 - 3.3e-16 59.2 0.2 4.8e-16 58.7 0.2 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF25072 - 0.0017 18.4 0.0 0.0034 17.4 0.0 1.6 1 0 0 1 1 1 1 Cyclin, C-terminal domain Methyltransf_16 PF10294.9 ORF2433 - 1.9e-08 34.2 0.0 2.5e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Lysine methyltransferase MTS PF05175.14 ORF2433 - 1.8e-05 24.4 0.1 3e-05 23.7 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 ORF2433 - 3.7e-05 23.2 0.0 4.8e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 ORF2433 - 0.017 14.9 0.4 0.026 14.3 0.4 1.5 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF2433 - 0.033 14.0 0.1 0.089 12.6 0.1 1.8 1 1 0 1 1 1 0 Methyltransferase domain DUF442 PF04273.13 ORF2433 - 0.053 13.6 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Putative phosphatase (DUF442) Methyltransf_25 PF13649.6 ORF2433 - 0.054 14.2 0.2 0.1 13.3 0.2 1.5 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 ORF2433 - 0.1 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MA3 PF02847.17 ORF23957 - 2.4e-10 40.4 1.5 1.5e-09 37.8 0.2 2.2 2 0 0 2 2 2 1 MA3 domain Macoilin PF09726.9 ORF23957 - 0.079 11.5 9.0 0.08 11.5 9.0 1.2 1 0 0 1 1 1 0 Macoilin family Nop25 PF09805.9 ORF23957 - 0.94 9.9 6.2 1.9 9.0 6.2 1.5 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) CobT PF06213.12 ORF23957 - 1.3 8.4 8.4 1.7 8.0 8.4 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT DUF5559 PF17714.1 ORF20625 - 0.015 15.2 0.1 0.026 14.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5559) DUF1910 PF08928.10 ORF20162 - 0.019 14.9 1.8 0.019 14.9 1.8 3.8 1 1 2 4 4 4 0 Domain of unknown function (DUF1910) DUF4250 PF14056.6 ORF20162 - 0.071 13.1 5.1 0.099 12.6 1.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4250) Exonuc_VII_L PF02601.15 ORF20162 - 0.79 9.2 23.0 0.23 11.0 19.7 1.7 1 1 1 2 2 2 0 Exonuclease VII, large subunit DUF3333 PF11812.8 ORF20162 - 0.84 9.8 9.3 0.2 11.9 4.5 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF3333) PRKG1_interact PF15898.5 ORF20162 - 3 8.8 35.5 5 8.1 14.8 2.5 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Gal4_dimer PF03902.13 ORF20162 - 8.4 6.6 14.2 1.2 9.4 0.2 4.0 3 2 0 3 3 3 0 Gal4-like dimerisation domain DUF5529 PF17669.1 ORF17061 - 0.0086 16.1 1.3 0.015 15.4 1.3 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5529) ATG27 PF09451.10 ORF14837 - 0.003 17.5 0.0 0.0039 17.1 0.0 1.2 1 0 0 1 1 1 1 Autophagy-related protein 27 Apolipoprotein PF01442.18 ORF14837 - 0.025 14.4 1.5 0.11 12.4 1.5 2.1 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain MDMPI_N PF11716.8 ORF14837 - 0.099 13.3 1.5 0.19 12.4 1.5 1.5 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain Virul_fac_BrkB PF03631.15 ORF14837 - 0.1 12.2 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Virulence factor BrkB PRMT5_C PF17286.2 ORF14434 - 2.9e-44 151.0 0.0 3.6e-44 150.7 0.0 1.0 1 0 0 1 1 1 1 PRMT5 oligomerisation domain PRMT5 PF05185.16 ORF14434 - 5.7e-18 65.4 0.0 7.5e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase TRAM_LAG1_CLN8 PF03798.16 ORF110519 - 1.2e-15 57.8 22.6 1.4e-15 57.5 22.6 1.1 1 0 0 1 1 1 1 TLC domain TRAPP PF04051.16 ORF110519 - 0.022 14.5 0.1 0.036 13.8 0.1 1.2 1 0 0 1 1 1 0 Transport protein particle (TRAPP) component ParA PF10609.9 ORF110279 - 1.9e-71 240.4 0.0 2.2e-71 240.2 0.0 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase PA14 PF07691.12 ORF106427 - 3.7e-13 49.5 0.5 5.5e-13 49.0 0.5 1.2 1 0 0 1 1 1 1 PA14 domain DUF4215 PF13948.6 ORF106427 - 9.5 6.7 9.3 0.82 10.2 0.7 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4215) GCD14 PF08704.10 ORF105254 - 4.9e-52 177.0 0.0 7.1e-52 176.5 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 ORF105254 - 0.00012 21.9 0.0 0.0016 18.3 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 ORF105254 - 0.0043 18.0 0.0 0.0071 17.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF105254 - 0.059 13.1 0.0 0.084 12.6 0.0 1.3 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 ORF105254 - 0.14 12.9 0.0 0.24 12.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain MORN PF02493.20 ORF104418 - 7.9e-27 91.5 40.1 6.7e-07 28.8 2.0 6.9 8 0 0 8 8 8 5 MORN repeat DUF523 PF04463.12 ORF104418 - 0.35 10.9 1.6 39 4.3 0.0 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF523) RPW8 PF05659.11 ORF103938 - 0.11 12.2 0.1 0.21 11.2 0.1 1.4 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 HATPase_c PF02518.26 ORF103593 - 1.2e-09 38.7 0.9 3e-09 37.4 0.4 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF103593 - 4.1e-09 36.4 0.4 1.9e-08 34.2 0.0 2.3 2 1 0 2 2 2 1 His Kinase A (phospho-acceptor) domain EF_TS PF00889.19 ORF103593 - 0.065 12.8 0.1 0.19 11.3 0.0 1.8 2 0 0 2 2 2 0 Elongation factor TS DUF5640 PF18692.1 ORF103593 - 0.14 12.2 3.1 0.84 9.7 0.2 2.9 2 1 1 3 3 3 0 Family of unknown function (DUF5640) DUF2838 PF10998.8 ORF103338 - 8.1e-17 61.5 18.0 1.1e-16 61.0 18.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) MAD PF05557.13 ORF102481 - 0.0055 15.1 7.4 0.008 14.6 7.4 1.2 1 0 0 1 1 1 1 Mitotic checkpoint protein ADIP PF11559.8 ORF102481 - 0.035 14.2 10.3 0.11 12.6 4.6 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Macoilin PF09726.9 ORF102481 - 0.24 9.9 8.6 0.31 9.6 8.6 1.2 1 0 0 1 1 1 0 Macoilin family HrpB7 PF09486.10 ORF102481 - 0.33 11.3 14.8 0.77 10.1 12.5 2.0 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) ATG16 PF08614.11 ORF102481 - 0.47 10.6 16.7 1.1 9.5 16.7 1.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) GAS PF13851.6 ORF102481 - 0.8 9.0 9.1 1.6 8.0 9.1 1.5 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding HAP1_N PF04849.13 ORF102481 - 1.5 8.0 13.4 8.5 5.5 13.4 1.9 1 1 0 1 1 1 0 HAP1 N-terminal conserved region bZIP_1 PF00170.21 ORF102481 - 1.5 8.9 12.4 11 6.1 0.7 3.1 2 1 0 2 2 2 0 bZIP transcription factor Spc24 PF08286.11 ORF102481 - 5.9 7.2 8.2 28 5.0 0.7 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF2838 PF10998.8 ORF102310 - 8.1e-17 61.5 18.0 1.1e-16 61.0 18.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) RFC1 PF08519.12 ORF101859 - 1.4e-20 74.0 0.3 8e-20 71.6 0.0 2.1 2 0 0 2 2 2 1 Replication factor RFC1 C terminal domain DUF2838 PF10998.8 ORF101242 - 8.1e-17 61.5 18.0 1.1e-16 61.0 18.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) ENTH PF01417.20 ORF100232 - 0.00017 21.6 0.0 0.00024 21.1 0.0 1.2 1 0 0 1 1 1 1 ENTH domain Dot_icm_IcmQ PF09475.10 ORF100232 - 0.14 11.6 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 Dot/Icm secretion system protein (dot_icm_IcmQ) DUF2805 PF10985.8 NODE_33754_length_643_cov_4.138158_g26912_i0forward_frame_1 - 0.018 15.4 0.3 0.018 15.4 0.3 2.8 4 0 0 4 4 4 0 Protein of unknown function (DUF2805) NLE PF08154.12 NODE_33739_length_643_cov_93.361842_g26897_i0forward_frame_1 - 0.042 14.4 0.3 0.082 13.4 0.3 1.4 1 0 0 1 1 1 0 NLE (NUC135) domain Clp_N PF02861.20 NODE_33734_length_643_cov_137.368421_g26892_i0reverse_frame_1 - 0.22 11.6 1.6 11 6.3 0.3 2.6 2 0 0 2 2 2 0 Clp amino terminal domain, pathogenicity island component Ribosomal_L37ae PF01780.19 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_1 - 8.8e-11 41.7 5.1 6.4 6.9 0.0 6.1 6 0 0 6 6 6 6 Ribosomal L37ae protein family SWIM PF04434.17 NODE_33728_length_643_cov_175.753289_g26887_i0forward_frame_1 - 1.7e-05 24.4 48.1 0.28 10.9 1.7 6.4 6 0 0 6 6 6 6 SWIM zinc finger SH PF01445.17 NODE_33728_length_643_cov_175.753289_g26887_i0forward_frame_1 - 0.055 13.5 0.1 18 5.4 0.0 2.5 2 0 0 2 2 2 0 Viral small hydrophobic protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks89.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks89.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks89.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks89.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:21:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CSD PF00313.22 ORF71219 - 7.9e-49 163.4 0.0 2.1e-10 40.3 0.0 6.3 6 0 0 6 6 6 5 'Cold-shock' DNA-binding domain RRM_1 PF00076.22 ORF71219 - 1.1e-11 44.4 0.0 4.5e-11 42.4 0.0 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) OB_RNB PF08206.11 ORF71219 - 1.1e-10 41.0 3.6 0.24 11.1 0.1 5.4 5 0 0 5 5 5 4 Ribonuclease B OB domain RRM_7 PF16367.5 ORF71219 - 0.013 15.6 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif RRM_5 PF13893.6 ORF71219 - 0.041 13.5 0.0 0.069 12.7 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ribosomal_S17_N PF16205.5 ORF71219 - 0.071 13.5 0.1 30 5.1 0.0 3.5 4 0 0 4 4 4 0 Ribosomal_S17 N-terminal DUF1126 PF06565.12 ORF66832 - 1.3e-70 233.9 0.8 1.5e-23 82.6 0.0 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_7 PF13499.6 ORF66832 - 3.2e-13 49.9 0.5 2.5e-12 47.1 0.2 2.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF66832 - 7.2e-13 47.1 1.7 3e-06 26.4 0.1 3.2 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF66832 - 1e-12 47.7 2.1 9.4e-06 25.4 0.1 3.2 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF66832 - 2.4e-10 39.5 3.2 5.5e-06 25.9 0.2 3.7 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF66832 - 2.6e-08 33.0 0.6 1.5e-05 24.2 0.1 2.9 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF66832 - 0.0097 16.2 0.4 0.07 13.5 0.0 2.3 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region DUF1955 PF09205.10 ORF66832 - 0.053 13.3 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) ABC_tran PF00005.27 ORF105665 - 4.5e-07 30.4 0.0 1.6e-06 28.7 0.0 1.9 1 1 0 1 1 1 1 ABC transporter ABC_membrane_2 PF06472.15 ORF105665 - 0.087 12.2 0.2 0.13 11.7 0.2 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region 2 PRD PF00874.20 ORF63999 - 0.14 12.4 1.4 1.8 8.9 0.1 3.0 2 0 0 2 2 2 0 PRD domain CFAP91 PF14738.6 ORF18983 - 8.3e-55 185.0 8.4 8.3e-55 185.0 8.4 4.4 3 1 1 4 4 4 1 Cilia- and flagella-associated protein 91 DsrD PF08679.11 ORF18983 - 0.044 14.0 0.3 0.14 12.5 0.3 1.8 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) WD40 PF00400.32 ORF98648 - 1.8e-25 88.7 2.9 4e-05 24.3 0.1 8.6 8 1 0 8 8 8 6 WD domain, G-beta repeat Nup160 PF11715.8 ORF98648 - 3.6e-06 25.9 0.6 0.0049 15.6 0.1 3.8 2 1 1 3 3 3 1 Nucleoporin Nup120/160 ANAPC4_WD40 PF12894.7 ORF98648 - 5.7e-05 23.3 0.3 9.4 6.6 0.0 5.4 3 3 3 7 7 7 2 Anaphase-promoting complex subunit 4 WD40 domain PQQ_3 PF13570.6 ORF98648 - 0.00031 21.1 2.2 0.33 11.5 0.0 4.9 6 1 1 7 7 7 1 PQQ-like domain Nucleoporin_N PF08801.11 ORF98648 - 0.0011 17.8 0.1 0.46 9.2 0.0 3.8 2 1 1 4 4 4 1 Nup133 N terminal like Ge1_WD40 PF16529.5 ORF98648 - 0.0057 15.7 1.8 0.083 11.8 0.2 3.4 3 2 1 4 4 4 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Frtz PF11768.8 ORF98648 - 0.026 12.8 0.0 2.5 6.3 0.0 2.2 2 0 0 2 2 2 0 WD repeat-containing and planar cell polarity effector protein Fritz PQQ_2 PF13360.6 ORF98648 - 0.054 13.1 0.0 0.87 9.1 0.0 2.8 2 1 0 2 2 2 0 PQQ-like domain ABC_membrane PF00664.23 ORF4697 - 4.3e-48 164.3 10.0 4.3e-48 164.3 10.0 1.7 2 0 0 2 2 2 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF4697 - 2.1e-32 112.5 0.0 5.5e-32 111.1 0.0 1.8 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF4697 - 1.4e-05 24.6 5.5 0.00025 20.6 5.5 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF4697 - 0.0011 18.8 1.5 0.0011 18.8 1.5 1.6 2 0 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 ORF4697 - 0.0023 18.4 0.0 0.0054 17.1 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 ORF4697 - 0.0044 17.0 0.0 0.013 15.4 0.0 1.8 1 0 0 1 1 1 1 Rad17 P-loop domain SbcCD_C PF13558.6 ORF4697 - 0.012 15.8 0.4 0.13 12.5 0.4 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit HCO3_cotransp PF00955.21 ORF4697 - 0.014 14.3 1.8 0.018 13.9 0.1 1.9 2 0 0 2 2 2 0 HCO3- transporter family PRK PF00485.18 ORF4697 - 0.017 14.9 0.1 0.089 12.5 0.0 2.2 2 1 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_22 PF13401.6 ORF4697 - 0.019 15.3 0.2 0.21 11.8 0.2 2.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF4697 - 0.021 14.5 0.1 0.056 13.2 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 ORF4697 - 0.027 14.9 0.3 2.6 8.5 0.3 2.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 ORF4697 - 0.04 13.8 0.2 0.13 12.2 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase G-alpha PF00503.20 ORF4697 - 0.052 12.7 0.0 0.081 12.1 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit UPF0542 PF15086.6 ORF4697 - 0.078 12.9 0.4 0.24 11.3 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0542 Zeta_toxin PF06414.12 ORF4697 - 0.096 12.0 0.0 0.22 10.8 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin DUF4023 PF13215.6 ORF4697 - 0.1 12.6 0.9 0.21 11.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4023) AAA_25 PF13481.6 ORF4697 - 0.15 11.6 0.1 0.67 9.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain DUF1126 PF06565.12 ORF46503 - 1.3e-70 233.9 0.8 1.5e-23 82.6 0.0 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_7 PF13499.6 ORF46503 - 3.3e-13 49.9 0.5 2.5e-12 47.1 0.2 2.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF46503 - 7.1e-13 47.1 1.7 3e-06 26.4 0.1 3.2 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF46503 - 9.9e-13 47.7 2.1 9.4e-06 25.4 0.1 3.2 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF46503 - 2.4e-10 39.5 3.2 5.5e-06 25.9 0.2 3.7 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF46503 - 2.6e-08 33.0 0.6 1.5e-05 24.2 0.1 2.9 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF46503 - 0.0085 16.4 0.2 0.071 13.4 0.0 2.2 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region DUF1955 PF09205.10 ORF46503 - 0.053 13.3 0.1 0.11 12.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) ABC_membrane PF00664.23 ORF21836 - 4.3e-48 164.3 10.0 4.3e-48 164.3 10.0 1.7 2 0 0 2 2 2 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF21836 - 2.1e-32 112.5 0.0 5.5e-32 111.1 0.0 1.8 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF21836 - 1.4e-05 24.6 5.5 0.00025 20.6 5.5 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF21836 - 0.0011 18.8 1.5 0.0011 18.8 1.5 1.6 2 0 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.6 ORF21836 - 0.0023 18.4 0.0 0.0054 17.1 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 ORF21836 - 0.0044 17.0 0.0 0.013 15.4 0.0 1.8 1 0 0 1 1 1 1 Rad17 P-loop domain SbcCD_C PF13558.6 ORF21836 - 0.012 15.8 0.4 0.13 12.5 0.4 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit HCO3_cotransp PF00955.21 ORF21836 - 0.014 14.3 1.8 0.018 13.9 0.1 1.9 2 0 0 2 2 2 0 HCO3- transporter family PRK PF00485.18 ORF21836 - 0.017 14.9 0.1 0.089 12.5 0.0 2.2 2 1 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_22 PF13401.6 ORF21836 - 0.019 15.3 0.2 0.21 11.8 0.2 2.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF21836 - 0.021 14.5 0.1 0.056 13.2 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 ORF21836 - 0.027 14.9 0.3 2.6 8.5 0.3 2.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 ORF21836 - 0.04 13.8 0.2 0.13 12.2 0.0 1.9 2 0 0 2 2 2 0 RsgA GTPase G-alpha PF00503.20 ORF21836 - 0.052 12.7 0.0 0.081 12.1 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit UPF0542 PF15086.6 ORF21836 - 0.078 12.9 0.4 0.24 11.3 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0542 Zeta_toxin PF06414.12 ORF21836 - 0.096 12.0 0.0 0.22 10.8 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin DUF4023 PF13215.6 ORF21836 - 0.1 12.6 0.9 0.21 11.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4023) AAA_25 PF13481.6 ORF21836 - 0.15 11.6 0.1 0.67 9.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain Pkinase PF00069.25 ORF99895 - 1.1e-13 51.2 0.0 1.9e-13 50.4 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain EF-hand_7 PF13499.6 ORF99895 - 2.1e-09 37.7 0.2 2.6e-07 31.0 0.1 2.6 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF99895 - 8e-06 25.4 0.1 0.29 11.2 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF99895 - 1.1e-05 24.6 0.2 0.14 11.8 0.0 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF99895 - 5.5e-05 22.9 1.9 0.0077 16.1 0.0 3.5 2 1 1 3 3 3 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF99895 - 0.00041 20.7 0.6 0.00085 19.6 0.6 1.6 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Pkinase_Tyr PF07714.17 ORF99895 - 0.00076 18.8 0.0 0.0014 18.0 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_5 PF13202.6 ORF99895 - 0.2 11.2 0.0 2.4 7.8 0.0 2.4 2 0 0 2 2 2 0 EF hand Helicase_C_4 PF13871.6 ORF73602 - 1e-72 245.1 0.0 1.4e-72 244.6 0.0 1.2 1 0 0 1 1 1 1 C-terminal domain on Strawberry notch homologue zf-RanBP PF00641.18 ORF998 - 0.013 14.8 3.4 0.022 14.1 3.4 1.4 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DUF4239 PF14023.6 ORF998 - 1.8 8.2 5.6 11 5.7 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4239) Raftlin PF15250.6 ORF998 - 4.6 5.9 32.3 3.7 6.2 5.6 2.2 2 0 0 2 2 2 0 Raftlin DUF1126 PF06565.12 ORF99630 - 9e-94 308.3 5.8 3.6e-32 110.3 0.1 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_8 PF13833.6 ORF99630 - 2.7e-12 46.3 2.9 1.9e-06 27.6 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF99630 - 1.4e-11 43.1 2.3 0.00011 21.5 0.2 3.1 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF99630 - 3.2e-10 40.3 0.5 0.00039 20.8 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF99630 - 5.9e-10 38.2 1.5 4.2e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF99630 - 6.3e-07 28.8 1.0 0.012 15.5 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF99630 - 0.0092 16.3 0.1 0.024 14.9 0.1 1.8 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_1 PF00036.32 ORF89954 - 3.5e-09 35.5 0.4 0.0007 19.0 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF89954 - 1.6e-08 33.8 0.1 0.0079 16.1 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF89954 - 6.3e-07 29.8 0.3 1.5e-06 28.6 0.3 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF89954 - 8.4e-07 28.7 0.7 0.0029 17.4 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain pair Peptidase_M54 PF07998.11 ORF89954 - 3.1e-06 27.3 0.7 5.4e-06 26.5 0.7 1.3 1 0 0 1 1 1 1 Peptidase family M54 EF-hand_5 PF13202.6 ORF89954 - 0.00047 19.5 0.2 0.0086 15.5 0.0 2.5 2 0 0 2 2 2 1 EF hand SPARC_Ca_bdg PF10591.9 ORF89954 - 0.0015 18.8 0.0 0.0036 17.6 0.0 1.6 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Ribosomal_60s PF00428.19 ORF89954 - 0.048 14.2 1.3 0.097 13.3 1.3 1.5 1 0 0 1 1 1 0 60s Acidic ribosomal protein Peptidase_M57 PF12388.8 ORF89954 - 0.12 11.9 0.2 0.23 11.0 0.2 1.3 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase OST-HTH PF12872.7 ORF89674 - 0.028 14.3 0.0 0.061 13.1 0.0 1.5 1 0 0 1 1 1 0 OST-HTH/LOTUS domain DUF1126 PF06565.12 ORF73307 - 9e-94 308.3 5.8 3.6e-32 110.3 0.1 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_8 PF13833.6 ORF73307 - 2.7e-12 46.3 2.9 1.9e-06 27.6 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF73307 - 1.4e-11 43.1 2.3 0.00011 21.5 0.2 3.1 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF73307 - 3.2e-10 40.3 0.5 0.00039 20.8 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF73307 - 5.9e-10 38.2 1.5 4.2e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF73307 - 6.3e-07 28.8 1.0 0.012 15.5 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF73307 - 0.0092 16.3 0.1 0.024 14.9 0.1 1.8 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region DUF1126 PF06565.12 ORF45141 - 9e-94 308.3 5.8 3.6e-32 110.3 0.1 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_8 PF13833.6 ORF45141 - 2.7e-12 46.3 2.9 1.9e-06 27.6 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF45141 - 1.4e-11 43.1 2.3 0.00011 21.5 0.2 3.1 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF45141 - 3.2e-10 40.3 0.5 0.00039 20.8 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF45141 - 5.9e-10 38.2 1.5 4.2e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF45141 - 6.3e-07 28.8 1.0 0.012 15.5 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF45141 - 0.0092 16.3 0.1 0.024 14.9 0.1 1.8 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region zf-RanBP PF00641.18 ORF43712 - 0.013 14.8 3.4 0.022 14.1 3.4 1.4 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DUF4239 PF14023.6 ORF43712 - 1.8 8.2 5.6 11 5.7 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4239) Raftlin PF15250.6 ORF43712 - 4.6 5.9 32.3 3.7 6.2 5.6 2.2 2 0 0 2 2 2 0 Raftlin DUF1126 PF06565.12 ORF106281 - 9e-94 308.3 5.8 3.6e-32 110.3 0.1 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_8 PF13833.6 ORF106281 - 2.7e-12 46.3 2.9 1.9e-06 27.6 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF106281 - 1.4e-11 43.1 2.3 0.00011 21.5 0.2 3.1 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF106281 - 3.2e-10 40.3 0.5 0.00039 20.8 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF106281 - 5.9e-10 38.2 1.5 4.2e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF106281 - 6.3e-07 28.8 1.0 0.012 15.5 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF106281 - 0.0092 16.3 0.1 0.024 14.9 0.1 1.8 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Thioredoxin_6 PF13848.6 ORF102421 - 1.8e-06 28.0 2.4 1.8e-06 28.0 2.4 4.0 3 2 1 4 4 4 2 Thioredoxin-like domain Glyco_hydro_81 PF03639.13 ORF102421 - 0.022 13.9 1.2 11 5.1 0.7 3.6 3 1 0 3 3 3 0 Glycosyl hydrolase family 81 N-terminal domain EF-hand_12 PF17901.1 ORF102421 - 0.062 13.8 1.6 0.64 10.5 0.2 2.7 2 0 0 2 2 2 0 EF-hand fold domain EF-hand_7 PF13499.6 ORF70255 - 1.2e-25 89.7 2.6 5.7e-11 42.7 0.0 5.3 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF70255 - 2e-22 77.0 12.7 7.5e-06 25.1 0.1 6.8 7 0 0 7 7 7 5 EF hand EF-hand_8 PF13833.6 ORF70255 - 2e-20 72.4 7.5 6.7e-07 29.1 0.2 5.8 5 0 0 5 5 5 5 EF-hand domain pair EF-hand_6 PF13405.6 ORF70255 - 9.9e-19 65.6 8.0 0.0024 17.7 0.0 7.4 7 0 0 7 7 7 5 EF-hand domain EF-hand_5 PF13202.6 ORF70255 - 4.1e-11 41.8 7.8 0.0012 18.3 0.0 5.2 5 0 0 5 5 5 3 EF hand EF-hand_4 PF12763.7 ORF70255 - 7.2e-07 29.1 2.1 0.058 13.4 0.0 4.5 4 1 1 5 5 5 2 Cytoskeletal-regulatory complex EF hand DNA_ligase_A_C PF04679.15 ORF70255 - 0.2 12.3 1.2 42 4.8 0.0 3.8 5 0 0 5 5 5 0 ATP dependent DNA ligase C terminal region EF-hand_7 PF13499.6 ORF68661 - 1.2e-25 89.7 2.6 5.7e-11 42.7 0.0 5.3 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF68661 - 2e-22 77.0 12.7 7.5e-06 25.1 0.1 6.8 7 0 0 7 7 7 5 EF hand EF-hand_8 PF13833.6 ORF68661 - 2e-20 72.4 7.5 6.7e-07 29.1 0.2 5.8 5 0 0 5 5 5 5 EF-hand domain pair EF-hand_6 PF13405.6 ORF68661 - 9.9e-19 65.6 8.0 0.0024 17.7 0.0 7.4 7 0 0 7 7 7 5 EF-hand domain EF-hand_5 PF13202.6 ORF68661 - 4.1e-11 41.8 7.8 0.0012 18.3 0.0 5.2 5 0 0 5 5 5 3 EF hand EF-hand_4 PF12763.7 ORF68661 - 7.2e-07 29.1 2.1 0.058 13.4 0.0 4.5 4 1 1 5 5 5 2 Cytoskeletal-regulatory complex EF hand DNA_ligase_A_C PF04679.15 ORF68661 - 0.2 12.3 1.2 42 4.8 0.0 3.8 5 0 0 5 5 5 0 ATP dependent DNA ligase C terminal region Kinesin PF00225.23 ORF63195 - 9.5e-97 323.9 0.1 9.5e-97 323.9 0.1 2.6 2 1 0 3 3 3 1 Kinesin motor domain Microtub_bd PF16796.5 ORF63195 - 1.9e-46 157.7 0.1 1.9e-46 157.7 0.1 2.7 3 1 0 3 3 3 1 Microtubule binding AAA_22 PF13401.6 ORF63195 - 0.65 10.3 6.0 1.2 9.4 0.0 2.8 2 1 0 2 2 2 0 AAA domain DUF4407 PF14362.6 ORF63195 - 3.5 6.9 15.5 7.9 5.7 15.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Pkinase PF00069.25 ORF112483 - 9.5e-35 120.2 0.6 1.4e-34 119.7 0.6 1.2 1 0 0 1 1 1 1 Protein kinase domain Kelch_1 PF01344.25 ORF112483 - 3.5e-19 68.1 8.3 9.9e-10 37.9 0.6 3.9 4 0 0 4 4 4 3 Kelch motif Pkinase_Tyr PF07714.17 ORF112483 - 1.1e-18 67.4 0.1 1.7e-18 66.9 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kelch_6 PF13964.6 ORF112483 - 4e-17 61.8 4.3 9e-06 25.8 0.0 4.4 3 1 1 4 4 4 2 Kelch motif Kelch_4 PF13418.6 ORF112483 - 2.9e-11 43.2 0.6 3e-05 23.9 0.0 4.2 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF112483 - 6.6e-08 32.4 0.4 0.66 10.0 0.4 3.6 3 0 0 3 3 3 3 Kelch motif Kelch_2 PF07646.15 ORF112483 - 9e-08 31.8 4.2 0.00097 19.0 0.1 4.0 4 0 0 4 4 4 2 Kelch motif Kinase-like PF14531.6 ORF112483 - 4e-07 29.7 0.0 6.7e-06 25.6 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 ORF112483 - 0.00024 20.5 0.0 0.00042 19.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF112483 - 0.0015 18.5 0.0 0.0024 17.9 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kelch_3 PF13415.6 ORF112483 - 0.015 15.6 1.8 2.7 8.4 0.0 3.5 4 1 0 4 4 4 0 Galactose oxidase, central domain BaxI_1 PF12811.7 ORF108009 - 0.0012 18.4 0.6 0.0033 17.0 0.6 1.7 1 0 0 1 1 1 1 Bax inhibitor 1 like Pkinase PF00069.25 ORF91016 - 3.1e-59 200.5 0.6 3.1e-59 200.5 0.6 2.9 2 2 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF91016 - 1.2e-45 155.8 0.3 1.2e-45 155.8 0.3 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase Kdo PF06293.14 ORF91016 - 0.00051 19.5 1.2 0.0013 18.2 0.0 2.1 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Ank_2 PF12796.7 ORF90467 - 3.4e-16 59.6 1.3 2.2e-05 24.9 0.1 4.3 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF90467 - 5.4e-09 36.4 2.5 0.053 14.1 0.2 5.1 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF90467 - 3.6e-08 33.5 9.2 0.17 12.2 0.1 5.2 3 1 2 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF90467 - 4.2e-07 30.1 9.8 6.5 7.4 0.0 6.5 5 1 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF90467 - 5.6e-06 26.3 6.6 6.1 7.8 0.1 6.5 6 0 0 6 6 6 1 Ankyrin repeat Pkinase_Tyr PF07714.17 ORF56768 - 5.6e-57 193.0 0.0 7.2e-57 192.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF56768 - 2.5e-47 161.5 0.0 3.6e-47 160.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF56768 - 0.047 12.5 0.0 0.075 11.8 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Ank_2 PF12796.7 ORF45471 - 2.9e-19 69.4 6.9 7.8e-07 29.6 0.3 3.9 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF45471 - 2.4e-10 39.7 0.9 0.088 13.4 0.0 6.7 7 0 0 7 7 7 2 Ankyrin repeat Ank PF00023.30 ORF45471 - 4.6e-10 39.5 2.5 0.064 13.7 0.0 5.9 6 0 0 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF45471 - 1.5e-09 38.2 1.7 0.18 12.4 0.0 5.1 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF45471 - 3.6e-09 36.7 7.3 0.036 14.4 0.1 5.3 4 1 2 6 6 6 4 Ankyrin repeats (many copies) Ion_trans PF00520.31 ORF35025 - 1.7e-18 66.7 23.8 2.6e-18 66.2 23.8 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF35025 - 6.7e-08 32.4 3.4 6.7e-08 32.4 3.4 2.2 2 0 0 2 2 2 1 Ion channel cNMP_binding PF00027.29 ORF35025 - 0.004 17.2 0.0 0.0084 16.2 0.0 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain FAP206 PF12018.8 ORF35025 - 0.044 13.3 0.2 0.077 12.5 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF5598 PF18127.1 ORF35025 - 0.11 13.0 0.1 30 5.1 0.0 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5598) ABC_membrane PF00664.23 ORF33387 - 1.3e-47 162.8 8.1 1.7e-47 162.4 8.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF33387 - 9.5e-33 113.6 0.0 1.6e-32 112.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF33387 - 2.4e-05 23.9 0.3 0.00032 20.2 0.3 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF33387 - 0.0011 19.1 0.8 0.059 13.6 0.4 3.1 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 ORF33387 - 0.0046 16.7 0.1 0.014 15.1 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF33387 - 0.0047 16.8 0.0 0.01 15.8 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 ORF33387 - 0.014 15.7 0.0 0.047 14.1 0.0 1.9 1 1 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 ORF33387 - 0.036 13.6 0.1 0.38 10.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 ORF33387 - 0.036 14.3 0.2 0.16 12.2 0.2 2.0 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF33387 - 0.63 10.0 2.7 3.5 7.5 0.1 2.7 3 0 0 3 3 3 0 NACHT domain Ion_trans PF00520.31 ORF32739 - 1.7e-18 66.7 23.8 2.6e-18 66.2 23.8 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF32739 - 6.7e-08 32.4 3.4 6.7e-08 32.4 3.4 2.2 2 0 0 2 2 2 1 Ion channel cNMP_binding PF00027.29 ORF32739 - 0.004 17.2 0.0 0.0084 16.2 0.0 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain FAP206 PF12018.8 ORF32739 - 0.044 13.3 0.2 0.077 12.5 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF5598 PF18127.1 ORF32739 - 0.11 13.0 0.1 30 5.1 0.0 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5598) Pkinase PF00069.25 ORF102890 - 3.1e-59 200.5 0.6 3.1e-59 200.5 0.6 2.9 2 2 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF102890 - 1.2e-45 155.8 0.3 1.2e-45 155.8 0.3 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase Kdo PF06293.14 ORF102890 - 0.00051 19.5 1.2 0.0013 18.2 0.0 2.1 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family YyzF PF14116.6 ORF92380 - 0.038 14.0 0.3 0.038 14.0 0.3 2.1 2 0 0 2 2 2 0 YyzF-like protein YyzF PF14116.6 ORF61707 - 0.038 14.0 0.3 0.038 14.0 0.3 2.0 2 0 0 2 2 2 0 YyzF-like protein FAD_binding_6 PF00970.24 ORF60728 - 3.9e-06 27.1 0.0 1.3e-05 25.4 0.0 1.9 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF60728 - 0.00045 20.8 0.0 0.0041 17.8 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF60728 - 0.0019 18.3 0.0 0.0086 16.2 0.0 2.1 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase YyzF PF14116.6 ORF12307 - 0.038 14.0 0.3 0.038 14.0 0.3 2.0 2 0 0 2 2 2 0 YyzF-like protein PPR_2 PF13041.6 ORF91 - 1.1e-26 92.8 0.0 1.6e-05 25.0 0.0 9.0 4 1 6 10 10 10 6 PPR repeat family PPR PF01535.20 ORF91 - 2e-18 65.3 2.9 0.12 12.7 0.0 9.8 10 0 0 10 10 10 3 PPR repeat PPR_3 PF13812.6 ORF91 - 7.7e-14 51.5 0.0 0.00037 20.5 0.0 5.5 4 1 3 7 7 7 4 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF91 - 5.3e-10 38.8 0.1 0.63 9.8 0.0 7.7 8 0 0 8 8 8 2 PPR repeat PPR_long PF17177.4 ORF91 - 0.00016 21.1 0.2 0.042 13.2 0.0 3.5 2 1 0 3 3 3 1 Pentacotripeptide-repeat region of PRORP Clathrin PF00637.20 ORF91 - 0.007 16.2 0.1 53 3.7 0.0 5.0 5 2 1 6 6 6 0 Region in Clathrin and VPS TPR_6 PF13174.6 ORF91 - 0.0079 16.8 0.7 9 7.2 0.2 4.4 5 0 0 5 5 5 1 Tetratricopeptide repeat Asp_Glu_race_2 PF14669.6 ORF91 - 0.1 12.2 0.1 0.8 9.3 0.0 2.5 3 0 0 3 3 3 0 Putative aspartate racemase Vps16_C PF04840.12 ORF91 - 0.13 11.3 0.1 0.3 10.1 0.0 1.6 2 0 0 2 2 2 0 Vps16, C-terminal region TPR_7 PF13176.6 ORF91 - 0.16 12.1 2.4 9.2 6.6 0.1 4.5 6 0 0 6 6 6 0 Tetratricopeptide repeat PYRIN PF02758.16 ORF91 - 0.17 12.0 0.5 1.1e+02 3.0 0.0 4.7 7 0 0 7 7 6 0 PAAD/DAPIN/Pyrin domain C2 PF00168.30 ORF70815 - 3.7e-22 78.6 0.1 1.1e-12 48.1 0.0 3.3 2 1 1 3 3 3 2 C2 domain Ferlin_C PF16165.5 ORF70815 - 0.00012 22.1 0.1 0.0052 16.7 0.0 2.5 2 0 0 2 2 2 1 Ferlin C-terminus DUF3568 PF12092.8 ORF70815 - 0.28 11.3 3.6 0.36 10.9 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3568) NAD_Gly3P_dh_C PF07479.14 ORF24210 - 9.4e-68 226.9 0.0 1.3e-40 139.0 0.0 2.5 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 ORF24210 - 5.2e-53 179.2 0.7 5.2e-44 150.0 0.1 2.4 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Ribosomal_S5_C PF03719.15 ORF24210 - 0.0022 17.4 0.0 0.34 10.4 0.0 2.6 2 0 0 2 2 2 2 Ribosomal protein S5, C-terminal domain NinE PF05322.11 ORF24210 - 0.041 13.8 0.0 0.11 12.3 0.0 1.7 2 0 0 2 2 2 0 NINE Protein F420_oxidored PF03807.17 ORF24210 - 0.079 13.6 0.2 0.93 10.1 0.2 2.5 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent STAS PF01740.21 ORF106027 - 1.6e-11 43.8 0.0 3.3e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 STAS domain Sulfate_transp PF00916.20 ORF106027 - 2.2e-09 36.6 2.3 4.2e-09 35.6 2.3 1.6 1 0 0 1 1 1 1 Sulfate permease family STAS_2 PF13466.6 ORF106027 - 0.00031 21.0 0.5 0.00031 21.0 0.5 2.9 3 1 0 3 3 3 1 STAS domain MFS_MOT1 PF16983.5 ORF106027 - 0.0026 18.2 0.7 0.0026 18.2 0.7 2.4 2 0 0 2 2 2 1 Molybdate transporter of MFS superfamily cNMP_binding PF00027.29 ORF106027 - 0.037 14.1 0.0 0.084 13.0 0.0 1.6 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain DUF229 PF02995.17 ORF80441 - 4.1e-25 88.4 14.7 8.2e-24 84.1 14.7 2.5 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF80441 - 1.8e-10 40.7 5.0 8e-10 38.6 3.5 2.6 2 1 0 2 2 2 1 Sulfatase HisKA_7TM PF16927.5 ORF80441 - 0.15 12.1 4.9 0.24 11.4 4.9 1.2 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase PalH PF08733.10 ORF80441 - 0.52 9.3 4.0 1 8.3 4.0 1.4 1 0 0 1 1 1 0 PalH/RIM21 Glycos_transf_2 PF00535.26 ORF79618 - 8e-13 48.5 0.0 1.3e-12 47.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_7C PF02709.14 ORF79618 - 7.3e-08 32.0 0.3 1.5e-07 30.9 0.3 1.5 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Ricin_B_lectin PF00652.22 ORF79618 - 0.00038 20.7 0.2 0.037 14.3 0.0 3.1 3 1 0 3 3 3 1 Ricin-type beta-trefoil lectin domain Zeta_toxin PF06414.12 ORF43973 - 1.2e-23 83.4 0.0 2e-23 82.7 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 ORF43973 - 8e-10 39.0 0.0 1.4e-09 38.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF43973 - 0.025 15.1 0.0 0.053 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF43973 - 0.047 14.1 0.2 0.14 12.6 0.2 1.9 1 1 0 1 1 1 0 AAA domain Proton_antipo_M PF00361.20 ORF19941 - 2.9e-99 332.0 24.3 2.9e-99 332.0 24.3 2.4 1 1 1 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 ORF19941 - 2e-23 82.2 3.3 2e-23 82.2 3.3 3.1 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF229 PF02995.17 ORF14686 - 4.1e-25 88.4 14.7 8.2e-24 84.1 14.7 2.5 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF14686 - 4.3e-11 42.8 3.3 7e-10 38.8 3.2 2.7 2 1 0 2 2 2 1 Sulfatase MARVEL PF01284.23 ORF14686 - 1.6 8.8 7.7 2.4 8.2 7.7 1.2 1 0 0 1 1 1 0 Membrane-associating domain DUF4407 PF14362.6 ORF83515 - 1 8.7 39.2 0.24 10.7 21.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Col_cuticle_N PF01484.17 ORF83515 - 1.5 8.9 4.0 32 4.7 0.1 3.6 2 1 1 3 3 3 0 Nematode cuticle collagen N-terminal domain TPR_MLP1_2 PF07926.12 ORF83515 - 2.1 8.4 53.0 4.1 7.5 27.9 4.4 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Dynein_C PF18199.1 ORF60451 - 2.8e-110 368.4 0.0 3.9e-110 367.9 0.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF60451 - 3.2e-58 196.2 0.0 6.2e-58 195.2 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF60451 - 1.4e-41 141.3 0.0 2.9e-41 140.3 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain V4R PF02830.18 ORF60451 - 0.058 13.4 0.0 0.86 9.7 0.1 2.6 3 0 0 3 3 3 0 V4R domain cNMP_binding PF00027.29 ORF102615 - 1.3e-05 25.2 0.1 2.6e-05 24.2 0.1 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain ATP-synt_ab PF00006.25 ORF88888 - 2.4e-103 344.4 0.0 3.5e-103 343.8 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 ORF88888 - 7e-41 138.9 0.0 1.2e-40 138.1 0.0 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 ORF88888 - 4.8e-15 55.8 0.1 4.8e-15 55.8 0.1 2.0 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain DHQ_synthase PF01761.20 ORF76376 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF76376 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF76376 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain DHQ_synthase PF01761.20 ORF7528 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF7528 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF7528 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain DHQ_synthase PF01761.20 ORF74231 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF74231 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF74231 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain DHQ_synthase PF01761.20 ORF6606 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF6606 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF6606 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain ABC_tran PF00005.27 ORF45018 - 3.6e-19 69.6 0.0 3.6e-19 69.6 0.0 2.6 3 2 0 3 3 3 1 ABC transporter ABC_membrane PF00664.23 ORF45018 - 1.6e-06 28.0 8.6 2.4e-06 27.4 8.6 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF45018 - 0.00024 20.6 1.1 0.00024 20.6 1.1 2.9 3 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF45018 - 0.0034 17.4 1.3 0.014 15.5 0.0 2.6 3 0 0 3 3 3 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF45018 - 0.015 15.2 0.1 0.039 13.8 0.1 1.7 1 0 0 1 1 1 0 RsgA GTPase GTP_EFTU PF00009.27 ORF45018 - 0.023 14.2 0.1 0.23 11.0 0.0 2.6 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 ORF45018 - 0.029 14.4 0.2 0.029 14.4 0.2 3.0 3 0 0 3 3 3 0 Dynamin family AAA_29 PF13555.6 ORF45018 - 0.042 13.6 0.3 0.095 12.5 0.3 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF45018 - 0.047 14.0 0.0 0.19 12.0 0.0 2.1 1 0 0 1 1 1 0 AAA domain CDC45 PF02724.14 ORF45018 - 0.049 11.9 8.9 0.85 7.8 0.2 2.1 2 0 0 2 2 2 0 CDC45-like protein DUF1644 PF07800.12 ORF45018 - 0.068 13.2 2.3 0.085 12.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1644) AAA_16 PF13191.6 ORF45018 - 0.08 13.3 0.5 0.44 10.9 0.0 2.3 2 1 0 2 2 2 0 AAA ATPase domain MFS_1 PF07690.16 ORF45018 - 0.21 10.5 6.4 0.32 9.9 6.4 1.3 1 0 0 1 1 1 0 Major Facilitator Superfamily AAA_21 PF13304.6 ORF45018 - 1.5 8.6 8.4 0.89 9.3 0.0 3.6 4 1 0 4 4 4 0 AAA domain, putative AbiEii toxin, Type IV TA system FAM60A PF15396.6 ORF45018 - 1.9 8.4 10.3 0.48 10.4 1.3 2.2 2 0 0 2 2 2 0 Protein Family FAM60A SHIPPO-rpt PF07004.12 ORF32560 - 1.6e-06 28.7 47.6 0.67 11.0 0.1 10.7 11 0 0 11 11 11 7 Sperm-tail PG-rich repeat DHQ_synthase PF01761.20 ORF29748 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF29748 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF29748 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain DHQ_synthase PF01761.20 ORF14296 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF14296 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF14296 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain AAA_7 PF12775.7 ORF111408 - 9.8e-70 233.7 0.1 3.2e-69 232.1 0.1 1.8 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_8 PF12780.7 ORF111408 - 9.3e-50 169.4 0.2 2.2e-49 168.1 0.0 1.8 2 0 0 2 2 2 1 P-loop containing dynein motor region D4 Dynein_AAA_lid PF17852.1 ORF111408 - 3.7e-16 59.4 0.2 7.5e-16 58.4 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_lid_1 PF17857.1 ORF111408 - 8.2e-16 58.1 0.0 2.1e-15 56.7 0.0 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 ORF111408 - 1.8e-07 31.2 0.0 0.00071 19.6 0.0 3.5 2 1 1 3 3 3 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF111408 - 0.00026 21.3 0.0 0.35 11.1 0.0 3.1 3 0 0 3 3 3 1 AAA domain DUF815 PF05673.13 ORF111408 - 0.0003 20.0 0.1 0.63 9.2 0.1 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA PF00004.29 ORF111408 - 0.00031 21.2 0.0 0.71 10.3 0.0 3.0 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) T2SSE PF00437.20 ORF111408 - 0.00049 19.2 0.4 0.0014 17.8 0.1 1.8 2 1 1 3 3 3 1 Type II/IV secretion system protein NB-ARC PF00931.22 ORF111408 - 0.0082 15.4 0.1 0.59 9.3 0.0 2.8 3 0 0 3 3 3 1 NB-ARC domain RNA_helicase PF00910.22 ORF111408 - 0.0091 16.4 0.0 0.61 10.5 0.0 2.7 2 0 0 2 2 2 1 RNA helicase Sigma54_activat PF00158.26 ORF111408 - 0.01 15.6 0.0 0.35 10.6 0.0 2.8 3 0 0 3 3 3 0 Sigma-54 interaction domain EF-hand_1 PF00036.32 ORF111408 - 0.015 14.8 3.9 0.018 14.6 1.4 2.5 2 0 0 2 2 2 0 EF hand EF-hand_6 PF13405.6 ORF111408 - 0.018 15.0 4.7 0.34 11.0 1.7 3.1 2 0 0 2 2 2 0 EF-hand domain AAA_30 PF13604.6 ORF111408 - 0.029 14.1 0.0 1.3 8.7 0.0 2.5 3 0 0 3 3 3 0 AAA domain Mg_chelatase PF01078.21 ORF111408 - 0.031 13.7 0.0 11 5.3 0.0 2.9 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI PhoH PF02562.16 ORF111408 - 0.035 13.6 0.0 5.1 6.5 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein Roc PF08477.13 ORF111408 - 0.053 13.7 0.4 0.4 10.9 0.1 2.5 2 1 0 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase AAA_33 PF13671.6 ORF111408 - 0.063 13.4 0.1 5.1 7.2 0.0 2.7 2 1 0 2 2 2 0 AAA domain EF-hand_5 PF13202.6 ORF111408 - 0.12 11.9 6.2 0.03 13.8 2.2 2.2 2 0 0 2 2 2 0 EF hand Imm41 PF15592.6 ORF111408 - 0.12 12.7 0.7 0.61 10.4 0.2 2.3 2 0 0 2 2 2 0 Immunity protein 41 AAA_16 PF13191.6 ORF111408 - 0.13 12.7 0.0 8.6 6.7 0.0 3.0 3 0 0 3 3 3 0 AAA ATPase domain EF-hand_8 PF13833.6 ORF111408 - 0.14 12.0 1.8 0.79 9.6 0.3 3.0 3 0 0 3 3 3 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF107002 - 8.6e-12 44.0 4.3 0.045 13.7 0.0 5.2 5 0 0 5 5 5 4 EF-hand domain EF-hand_1 PF00036.32 ORF107002 - 8.5e-10 37.5 5.2 0.28 10.8 0.0 5.6 5 1 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF107002 - 1.5e-09 38.2 1.9 0.0032 17.9 0.3 3.9 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF107002 - 7.8e-07 28.8 2.6 0.18 11.6 0.0 5.0 5 0 0 5 5 5 2 EF-hand domain pair DUF4476 PF14771.6 ORF107002 - 0.00019 21.6 0.1 0.00044 20.5 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4476) EF-hand_5 PF13202.6 ORF107002 - 0.0011 18.3 9.8 0.84 9.3 0.0 4.9 5 0 0 5 5 5 2 EF hand NCBP3 PF10309.9 ORF103902 - 4.8e-12 45.5 0.0 9.3e-12 44.6 0.0 1.4 1 0 0 1 1 1 1 Nuclear cap-binding protein subunit 3 tRNA_edit PF04073.15 ORF103902 - 0.00015 21.9 0.0 0.00031 20.8 0.0 1.4 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain CIAPIN1 PF05093.13 ORF103902 - 0.076 13.5 0.3 0.52 10.9 0.0 2.5 2 0 0 2 2 2 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis PAS PF00989.25 ORF89943 - 2.6e-22 78.9 0.4 1.2e-21 76.8 0.0 2.2 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.26 ORF89943 - 3.3e-22 79.1 0.0 7.4e-22 78.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF89943 - 3.2e-17 62.3 0.5 2.3e-16 59.6 0.1 2.6 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 ORF89943 - 3.8e-12 46.4 0.0 9.5e-12 45.1 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 ORF89943 - 2.7e-11 43.7 0.2 1.5e-10 41.3 0.1 2.4 3 0 0 3 3 3 1 PAS fold PAS_8 PF13188.7 ORF89943 - 8.3e-06 25.7 0.0 3.4e-05 23.7 0.0 2.0 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 ORF89943 - 0.00059 19.7 0.0 0.0012 18.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 ORF89943 - 0.0078 16.1 0.0 0.021 14.8 0.0 1.7 1 0 0 1 1 1 1 GHKL domain HisKA_4TM PF16926.5 ORF89943 - 0.01 15.4 0.1 0.026 14.1 0.1 1.7 1 0 0 1 1 1 0 Archaeal 4TM region of histidine kinase HAMP PF00672.25 ORF89943 - 0.011 16.0 0.2 0.041 14.3 0.2 2.1 1 0 0 1 1 1 0 HAMP domain AI-2E_transport PF01594.16 ORF89943 - 0.07 12.3 0.8 3.8 6.6 0.3 2.3 2 0 0 2 2 2 0 AI-2E family transporter HisKA_2 PF07568.12 ORF89943 - 0.078 13.1 0.4 0.3 11.2 0.2 2.0 1 1 1 2 2 2 0 Histidine kinase Nucleopor_Nup85 PF07575.13 ORF55262 - 1.3e-17 63.6 0.0 3e-17 62.4 0.0 1.5 1 1 0 1 1 1 1 Nup85 Nucleoporin LRR_8 PF13855.6 ORF104058 - 5.1e-36 122.2 56.9 1.5e-08 34.3 2.1 5.8 5 1 1 6 6 6 5 Leucine rich repeat LRR_4 PF12799.7 ORF104058 - 1.7e-28 98.2 71.5 4.6e-08 33.2 6.1 8.5 3 3 4 8 8 8 8 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF104058 - 1.7e-09 37.4 23.5 0.0017 17.9 3.0 3.7 2 1 1 3 3 3 3 Leucine-rich repeat LRR_1 PF00560.33 ORF104058 - 4.9e-06 26.3 43.5 2 9.3 1.3 11.7 11 1 0 11 11 11 4 Leucine Rich Repeat LRR_6 PF13516.6 ORF104058 - 0.037 14.1 56.7 0.52 10.5 0.1 10.2 11 0 0 11 11 11 0 Leucine Rich repeat RAWUL PF16207.5 ORF104058 - 0.086 13.5 0.1 0.68 10.6 0.0 2.5 2 0 0 2 2 2 0 RAWUL domain RING finger- and WD40-associated ubiquitin-like LRR_5 PF13306.6 ORF104058 - 0.13 12.3 14.9 7.3 6.6 0.2 3.9 2 2 1 4 4 4 0 BspA type Leucine rich repeat region (6 copies) Beta_helix PF13229.6 ORF104058 - 2.4 8.0 9.0 0.92 9.3 0.7 2.5 2 0 0 2 2 2 0 Right handed beta helix region PAGK PF15284.6 NODE_4164_length_1824_cov_59.551146_g2956_i0forward_frame_3 - 3.3 7.7 5.9 0.8 9.7 0.1 2.9 3 0 0 3 3 3 0 Phage-encoded virulence factor Transglut_core PF01841.19 ORF99857 - 2.4e-13 50.5 0.3 9.4e-13 48.6 0.3 2.0 1 0 0 1 1 1 1 Transglutaminase-like superfamily F5_F8_type_C PF00754.25 ORF99857 - 1.4e-12 47.8 0.0 3.3e-12 46.6 0.0 1.6 1 0 0 1 1 1 1 F5/8 type C domain Rad4 PF03835.15 ORF99857 - 7.4e-10 38.7 0.2 1.5e-09 37.7 0.2 1.4 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain PAW PF04721.17 ORF99857 - 0.0014 18.4 0.1 0.0022 17.8 0.1 1.3 1 0 0 1 1 1 1 PNGase C-terminal domain, mannose-binding module PAW Zn_Tnp_IS1595 PF12760.7 ORF99857 - 0.62 10.1 5.1 3.7 7.6 4.5 2.5 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Methyltransf_23 PF13489.6 ORF90148 - 1.6e-05 24.8 0.0 2.7e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF90148 - 0.0002 22.0 0.0 0.00037 21.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF90148 - 0.025 15.2 0.0 0.052 14.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 ORF90148 - 0.029 13.9 0.0 0.048 13.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF90148 - 0.047 13.7 0.0 0.079 12.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 ORF90148 - 0.089 12.2 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) SAM_MT PF04445.13 ORF90148 - 0.11 11.9 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase Methyltransf_31 PF13847.6 ORF90148 - 0.16 11.7 0.1 0.3 10.9 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 ORF90148 - 0.17 11.3 0.0 0.27 10.6 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB HELP PF03451.14 ORF26117 - 1.5e-20 72.8 0.1 3e-20 71.8 0.1 1.5 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF26117 - 5.8e-14 52.3 17.3 0.21 12.5 0.0 7.6 8 0 0 8 8 8 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF26117 - 1.7e-09 37.9 0.1 0.00058 20.1 0.0 3.9 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Me-amine-dh_H PF06433.11 ORF26117 - 0.049 12.5 0.2 0.36 9.6 0.0 2.1 2 0 0 2 2 2 0 Methylamine dehydrogenase heavy chain (MADH) WD40_like PF17005.5 ORF26117 - 0.099 12.0 6.8 0.43 9.9 0.7 3.3 2 1 0 3 3 3 0 WD40-like domain DUF1447 PF07288.11 ORF26117 - 0.25 11.4 1.3 1.4 9.0 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1447) YkyA PF10368.9 ORF23647 - 0.036 13.7 0.2 0.036 13.7 0.2 2.3 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein DUF5588 PF17826.1 ORF23647 - 0.16 10.8 0.1 0.33 9.8 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5588) CorA PF01544.18 ORF18368 - 5.1e-24 85.1 0.0 3.9e-21 75.6 0.0 2.1 2 0 0 2 2 2 2 CorA-like Mg2+ transporter protein DUF3566 PF12089.8 NODE_4183_length_1821_cov_84.577268_g2971_i0reverse_frame_2 - 6.3 7.2 9.4 5.3 7.4 1.1 3.6 4 0 0 4 4 4 0 Transmembrane domain of unknown function (DUF3566) Pkinase PF00069.25 ORF99236 - 5.8e-37 127.5 0.0 7.3e-18 64.9 0.0 3.1 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF99236 - 2.1e-08 33.8 0.0 0.039 13.2 0.0 3.1 2 1 0 2 2 2 2 Protein tyrosine kinase Ank_2 PF12796.7 ORF54459 - 2.3e-17 63.3 0.7 4e-05 24.1 0.0 4.2 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF54459 - 4.9e-12 44.9 0.2 0.011 16.2 0.0 5.2 5 0 0 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF54459 - 1.5e-11 44.3 2.2 0.0047 17.2 0.1 4.7 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF54459 - 3.6e-11 43.4 0.8 0.12 13.0 0.0 4.7 4 0 0 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF54459 - 1.3e-10 41.3 0.1 0.013 15.9 0.0 4.6 4 0 0 4 4 4 3 Ankyrin repeat DUF2817 PF10994.8 ORF54459 - 0.16 11.3 0.1 2.6 7.3 0.0 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2817) TPR_12 PF13424.6 ORF45807 - 5.5e-15 55.4 38.8 0.0036 17.6 0.4 6.6 6 1 0 7 7 7 5 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF45807 - 5.6e-13 49.0 29.7 9.1e-06 25.3 0.7 3.4 2 1 1 3 3 3 3 MalT-like TPR region SNAP PF14938.6 ORF45807 - 0.016 14.6 25.0 0.064 12.7 0.5 3.9 2 1 1 4 4 4 0 Soluble NSF attachment protein, SNAP TPR_2 PF07719.17 ORF45807 - 0.35 11.1 42.2 1.2 9.4 0.1 10.4 12 0 0 12 12 12 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF45807 - 1.9 8.5 35.3 0.78 9.7 0.1 9.0 10 0 0 10 10 10 0 Tetratricopeptide repeat RPN7 PF10602.9 ORF45807 - 5.3 6.7 9.4 17 5.1 2.4 3.7 2 1 1 3 3 3 0 26S proteasome subunit RPN7 HECT PF00632.25 ORF42965 - 1.1e-56 192.6 0.1 1.1e-56 192.6 0.1 1.9 2 1 0 2 2 2 1 HECT-domain (ubiquitin-transferase) DUF4830 PF16112.5 ORF42965 - 0.16 12.5 1.0 1.3 9.5 0.1 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4830) Pyr_redox_3 PF13738.6 ORF109189 - 3.8e-06 26.4 0.0 6.7e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 ORF109189 - 0.00042 18.9 0.0 0.024 13.1 0.0 2.2 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 ORF109189 - 0.0012 19.0 0.0 0.0052 17.0 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 ORF109189 - 0.0099 15.1 0.0 0.023 13.9 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF109189 - 0.014 14.6 0.0 0.034 13.4 0.0 1.6 1 1 0 1 1 1 0 Thi4 family SpoIIP PF07454.11 ORF107017 - 0.023 14.2 0.2 0.023 14.2 0.2 2.3 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) APG6_N PF17675.1 ORF107017 - 0.023 15.2 4.0 0.023 15.2 4.0 2.2 3 0 0 3 3 3 0 Apg6 coiled-coil region Hormone_1 PF00103.20 ORF107017 - 0.18 11.5 2.1 0.38 10.5 2.1 1.5 1 0 0 1 1 1 0 Somatotropin hormone family BPL_N PF09825.9 ORF107017 - 0.19 10.8 1.2 0.34 9.9 1.2 1.4 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF3535 PF12054.8 ORF107017 - 0.32 10.2 3.0 0.65 9.2 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3535) DUF1664 PF07889.12 ORF107017 - 1.5 8.9 5.3 1.2 9.2 2.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) UCH PF00443.29 ORF91854 - 7.1e-38 130.6 5.3 9.9e-38 130.1 5.3 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF91854 - 1.8e-22 80.4 7.3 4.2e-22 79.1 6.3 2.1 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase TraO PF10626.9 ORF91854 - 0.025 14.4 0.1 0.082 12.7 0.1 1.9 1 0 0 1 1 1 0 Conjugative transposon protein TraO MTCP1 PF08991.10 ORF91854 - 0.07 13.4 2.6 0.18 12.1 2.6 1.6 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type Pkinase PF00069.25 ORF88374 - 9.9e-06 25.1 0.0 0.00011 21.7 0.0 2.6 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF88374 - 0.0046 16.3 0.0 0.0083 15.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase MMS19_C PF12460.8 ORF88374 - 0.015 14.5 0.1 0.032 13.4 0.1 1.5 1 0 0 1 1 1 0 RNAPII transcription regulator C-terminal DUF4116 PF13475.6 ORF47507 - 1.2e-25 89.0 0.0 7.8e-08 31.9 0.1 5.6 1 1 4 5 5 5 5 Domain of unknown function (DUF4116) KR PF08659.10 ORF47507 - 0.00022 21.2 0.0 0.00093 19.1 0.0 2.1 2 0 0 2 2 2 1 KR domain PARP PF00644.20 ORF4405 - 1.5e-13 50.8 0.1 2.7e-13 50.0 0.1 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain ARTD15_N PF18084.1 ORF4405 - 9e-05 22.6 0.0 0.0012 19.0 0.0 2.3 1 1 0 1 1 1 1 ARTD15 N-terminal domain PTS_2-RNA PF01885.16 ORF4405 - 0.16 12.0 0.0 0.36 10.9 0.0 1.5 1 1 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family RHS PF03527.14 ORF33490 - 1.8e-14 53.2 0.4 6.2e-14 51.5 0.4 2.1 1 0 0 1 1 1 1 RHS protein RHS_repeat PF05593.14 ORF33490 - 4.4e-11 43.1 34.4 1e-07 32.3 5.5 7.5 8 2 1 9 9 9 2 RHS Repeat OCRE PF17780.1 ORF33490 - 2.3 8.3 11.8 0.13 12.3 2.7 3.3 2 1 0 2 2 2 0 OCRE domain Pkinase PF00069.25 ORF30654 - 9.9e-06 25.1 0.0 0.00011 21.7 0.0 2.6 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30654 - 0.0046 16.3 0.0 0.0083 15.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase MMS19_C PF12460.8 ORF30654 - 0.015 14.5 0.1 0.032 13.4 0.1 1.5 1 0 0 1 1 1 0 RNAPII transcription regulator C-terminal Rdx PF10262.9 ORF28698 - 0.00021 21.4 0.1 0.002 18.3 0.0 2.6 2 0 0 2 2 2 1 Rdx family EF-hand_8 PF13833.6 ORF24830 - 0.00038 20.3 0.0 0.0013 18.5 0.0 2.0 1 0 0 1 1 1 1 EF-hand domain pair CCB2_CCB4 PF11152.8 ORF24830 - 0.062 12.6 0.1 0.22 10.8 0.0 1.9 2 0 0 2 2 2 0 Cofactor assembly of complex C subunit B, CCB2/CCB4 EF-hand_6 PF13405.6 ORF24830 - 0.11 12.4 0.0 2.1 8.5 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain EFG_IV PF03764.18 ORF107167 - 2.1e-28 98.5 0.0 1.1e-27 96.2 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF107167 - 6.4e-20 71.0 0.0 2.5e-19 69.1 0.0 2.0 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF107167 - 2.1e-14 53.3 0.0 8.1e-14 51.5 0.0 2.0 1 1 1 2 2 2 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF107167 - 3.7e-14 52.9 0.1 9.7e-14 51.5 0.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 ORF107167 - 0.055 13.3 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain EF-hand_7 PF13499.6 ORF90236 - 7.4e-06 26.3 0.2 1.6e-05 25.3 0.2 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF90236 - 0.001 18.8 1.1 0.0093 15.8 0.1 2.8 3 0 0 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF90236 - 0.045 13.6 0.2 0.096 12.5 0.2 1.5 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF90236 - 0.055 13.0 0.0 0.16 11.6 0.0 1.8 1 0 0 1 1 1 0 EF hand UPF0061 PF02696.14 ORF65360 - 1e-120 403.7 0.1 2.1e-120 402.7 0.1 1.4 1 1 0 1 1 1 1 Uncharacterized ACR, YdiU/UPF0061 family tRNA-synt_1c_C PF03950.18 ORF65360 - 0.11 12.4 0.5 0.22 11.4 0.5 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1 PF00133.22 ORF40108 - 4.9e-78 262.9 0.1 7.3e-78 262.3 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF40108 - 2.2e-34 118.6 1.2 4.9e-34 117.5 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA Val_tRNA-synt_C PF10458.9 ORF40108 - 1.5e-09 38.0 9.5 3e-09 37.0 7.4 2.5 2 0 0 2 2 2 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1g PF09334.11 ORF40108 - 3.8e-07 29.2 0.8 0.0036 16.1 0.0 2.5 1 1 1 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF40108 - 0.022 14.1 0.0 0.051 12.9 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain LRS4 PF10422.9 ORF40108 - 0.031 13.9 1.4 0.049 13.2 1.4 1.3 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 HTH_WhiA PF02650.14 ORF40108 - 0.45 10.9 2.3 1.8 8.9 1.2 2.3 2 0 0 2 2 2 0 WhiA C-terminal HTH domain DUF16 PF01519.16 ORF40108 - 0.51 10.9 3.2 0.81 10.2 1.8 2.0 2 0 0 2 2 2 0 Protein of unknown function DUF16 Ion_trans PF00520.31 ORF39882 - 6.5e-19 68.1 16.7 1.1e-18 67.4 16.7 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_8 PF13833.6 ORF39882 - 1.6e-06 27.9 0.2 0.0059 16.4 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF39882 - 4.3e-06 25.9 1.6 0.012 15.1 0.2 2.9 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF39882 - 2e-05 24.2 2.0 0.16 12.0 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF39882 - 3.8e-05 24.1 0.1 9.9e-05 22.7 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF39882 - 1 9.0 3.1 3.4 7.3 0.1 2.8 3 0 0 3 3 3 0 EF hand Pepdidase_M14_N PF18027.1 ORF39414 - 8.6e-16 58.2 0.3 1.7e-15 57.3 0.3 1.5 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain Peptidase_M14 PF00246.24 ORF39414 - 3.1e-13 50.2 0.0 1.9e-12 47.6 0.0 2.3 1 1 0 1 1 1 1 Zinc carboxypeptidase AstE_AspA PF04952.14 ORF39414 - 0.009 15.1 0.0 0.017 14.2 0.0 1.4 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family DUF21 PF01595.20 ORF103686 - 2.8e-29 102.0 2.4 5.7e-29 101.1 2.4 1.5 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 ORF103686 - 5e-09 36.5 1.0 0.0046 17.4 0.0 3.7 3 0 0 3 3 3 3 CBS domain YrhC PF14143.6 ORF103686 - 3.1 8.0 5.8 0.69 10.1 0.7 2.4 2 0 0 2 2 2 0 YrhC-like protein HECT PF00632.25 ORF82787 - 4.9e-69 233.2 0.0 7e-69 232.6 0.0 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) TPP_enzyme_N PF02776.18 ORF77901 - 2.4e-59 199.8 0.7 4e-56 189.3 0.2 2.5 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 ORF77901 - 2.9e-51 173.3 0.2 3.7e-49 166.4 0.0 3.2 3 1 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF77901 - 4.3e-48 162.5 0.2 8.8e-48 161.5 0.2 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 ORF77901 - 0.0054 16.5 0.1 0.012 15.3 0.1 1.6 2 0 0 2 2 2 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ROQ_II PF18386.1 ORF77901 - 0.12 12.2 0.3 0.31 10.9 0.3 1.6 1 0 0 1 1 1 0 Roquin II domain DUF3223 PF11523.8 ORF71500 - 3.7e-14 53.3 0.0 7.7e-14 52.3 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3223) ZZ PF00569.17 ORF55016 - 1.8e-14 53.3 6.4 3.9e-14 52.2 6.4 1.6 1 0 0 1 1 1 1 Zinc finger, ZZ type PB1 PF00564.24 ORF55016 - 3.1e-05 23.8 1.0 7.2e-05 22.6 1.0 1.7 1 0 0 1 1 1 1 PB1 domain N_BRCA1_IG PF16158.5 ORF55016 - 0.0023 18.6 0.1 0.0065 17.2 0.1 1.8 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene C1_2 PF03107.16 ORF55016 - 0.014 15.7 6.2 0.014 15.7 6.2 1.9 2 0 0 2 2 2 0 C1 domain eIF-5_eIF-2B PF01873.17 ORF55016 - 0.96 9.3 6.3 4.8 7.1 5.9 2.5 2 1 0 2 2 2 0 Domain found in IF2B/IF5 ZZ PF00569.17 ORF33951 - 1.8e-14 53.3 6.4 3.9e-14 52.2 6.4 1.6 1 0 0 1 1 1 1 Zinc finger, ZZ type PB1 PF00564.24 ORF33951 - 3.1e-05 23.8 1.0 7.2e-05 22.6 1.0 1.7 1 0 0 1 1 1 1 PB1 domain N_BRCA1_IG PF16158.5 ORF33951 - 0.0023 18.6 0.1 0.0065 17.2 0.1 1.8 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene C1_2 PF03107.16 ORF33951 - 0.014 15.7 6.2 0.014 15.7 6.2 1.9 2 0 0 2 2 2 0 C1 domain eIF-5_eIF-2B PF01873.17 ORF33951 - 0.96 9.3 6.3 4.8 7.1 5.9 2.5 2 1 0 2 2 2 0 Domain found in IF2B/IF5 ZZ PF00569.17 ORF26263 - 1.8e-14 53.3 6.4 3.9e-14 52.2 6.4 1.6 1 0 0 1 1 1 1 Zinc finger, ZZ type PB1 PF00564.24 ORF26263 - 3.1e-05 23.8 1.0 7.2e-05 22.6 1.0 1.7 1 0 0 1 1 1 1 PB1 domain N_BRCA1_IG PF16158.5 ORF26263 - 0.0023 18.6 0.1 0.0065 17.2 0.1 1.8 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene C1_2 PF03107.16 ORF26263 - 0.014 15.7 6.2 0.014 15.7 6.2 1.9 2 0 0 2 2 2 0 C1 domain eIF-5_eIF-2B PF01873.17 ORF26263 - 0.96 9.3 6.3 4.8 7.1 5.9 2.5 2 1 0 2 2 2 0 Domain found in IF2B/IF5 CBM_20 PF00686.19 ORF67265 - 7.2e-12 45.1 2.2 1.2e-11 44.3 0.2 2.5 2 0 0 2 2 2 1 Starch binding domain Amidase PF01425.21 ORF60686 - 2.6e-83 280.5 0.0 3.5e-83 280.1 0.0 1.1 1 0 0 1 1 1 1 Amidase DUF5472 PF17566.2 ORF60686 - 0.044 13.7 0.0 0.12 12.4 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5472) RCC1_2 PF13540.6 ORF41220 - 1.3e-17 63.1 53.7 0.14 12.0 0.0 13.5 14 0 0 14 14 14 11 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 ORF41220 - 1.8e-06 28.4 0.0 32 5.1 0.0 9.0 13 0 0 13 13 13 0 Spectrin repeat Phage_P2_GpU PF06995.11 ORF41220 - 0.0025 17.4 0.9 95 2.6 0.0 6.4 8 1 1 9 9 9 0 Phage P2 GpU Yuri_gagarin PF15934.5 ORF41220 - 0.0069 16.3 0.0 1.1 9.0 0.0 2.9 2 0 0 2 2 2 1 Yuri gagarin Choline_sulf_C PF12411.8 ORF41220 - 0.12 12.2 0.4 15 5.5 0.0 4.2 4 0 0 4 4 4 0 Choline sulfatase enzyme C terminal DDE_Tnp_1_3 PF13612.6 ORF41220 - 0.94 9.5 4.6 97 2.9 0.0 4.9 6 0 0 6 6 6 0 Transposase DDE domain NOZZLE PF08744.10 ORF41220 - 6.6 6.1 17.9 0.54 9.7 0.6 3.6 3 1 0 4 4 4 0 Plant transcription factor NOZZLE Ribosomal_L29 PF00831.23 ORF41220 - 6.7 6.8 9.1 42 4.2 0.1 4.2 5 0 0 5 5 5 0 Ribosomal L29 protein E1-E2_ATPase PF00122.20 ORF38066 - 3e-33 114.9 0.1 3e-33 114.9 0.1 1.8 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase PF13246.6 ORF38066 - 1.5e-13 50.6 0.3 3.3e-13 49.5 0.3 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 ORF38066 - 7.7e-11 42.7 0.1 5.2e-10 40.0 0.1 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase ABC_membrane_3 PF13748.6 ORF38066 - 0.0037 16.5 0.3 0.0075 15.5 0.3 1.4 1 0 0 1 1 1 1 ABC transporter transmembrane region Hydrolase_6 PF13344.6 ORF38066 - 0.079 13.1 0.0 0.41 10.8 0.0 2.1 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase DUF3021 PF11457.8 ORF38066 - 0.15 12.4 2.9 9.4 6.6 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3021) Kinesin PF00225.23 ORF24183 - 2.5e-107 358.7 4.5 2.5e-107 358.7 4.5 2.3 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF24183 - 3.9e-25 88.5 0.3 3.9e-25 88.5 0.3 3.1 3 1 0 3 3 3 1 Microtubule binding Rootletin PF15035.6 ORF24183 - 3.2 7.7 29.9 0.16 12.0 22.5 2.1 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion AAA_lid_4 PF17864.1 NODE_4393_length_1795_cov_413.080682_g3135_i0forward_frame_1 - 0.22 11.3 2.6 1.4 8.7 0.3 2.4 2 0 0 2 2 2 0 RuvB AAA lid domain PEP-utilizers_C PF02896.18 ORF96386 - 3.4e-110 367.8 0.0 4.5e-110 367.4 0.0 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilisers_N PF05524.13 ORF96386 - 6.8e-24 84.3 1.0 1.5e-23 83.2 1.0 1.6 1 0 0 1 1 1 1 PEP-utilising enzyme, N-terminal PEP-utilizers PF00391.23 ORF96386 - 1.5e-15 56.6 0.1 1.5e-15 56.6 0.1 1.9 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain Lipase_GDSL PF00657.22 ORF96386 - 0.00072 19.6 0.0 0.15 12.0 0.0 2.2 2 0 0 2 2 2 2 GDSL-like Lipase/Acylhydrolase HpcH_HpaI PF03328.14 ORF96386 - 0.08 12.1 0.1 0.15 11.1 0.1 1.4 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family peroxidase PF00141.23 ORF14952 - 1.8e-43 148.9 0.0 3.7e-43 147.9 0.0 1.5 1 0 0 1 1 1 1 Peroxidase Fer2_BFD PF04324.15 ORF14952 - 3.3e-13 49.7 3.8 2e-11 44.0 5.8 2.3 2 0 0 2 2 2 1 BFD-like [2Fe-2S] binding domain Rubredoxin_C PF18267.1 ORF14952 - 6.5e-08 32.4 0.3 5.6e-07 29.4 0.3 2.3 1 1 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain Peptidase_M3 PF01432.20 NODE_4393_length_1795_cov_413.080682_g3135_i0reverse_frame_3 - 2.4e-80 271.1 0.0 2.8e-80 270.8 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 XRN_M PF17846.1 ORF61750 - 0.064 12.2 0.1 0.13 11.2 0.0 1.4 2 0 0 2 2 2 0 Xrn1 helical domain ECH_1 PF00378.20 ORF48800 - 4.1e-09 36.1 0.5 1.9e-08 33.9 0.2 2.3 2 1 0 2 2 2 1 Enoyl-CoA hydratase/isomerase TPR_12 PF13424.6 ORF48800 - 1.3e-06 28.5 25.0 0.0038 17.5 1.0 5.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF48800 - 0.025 15.1 0.1 0.025 15.1 0.1 5.5 3 2 2 5 5 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF48800 - 0.16 11.9 0.0 0.16 11.9 0.0 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF48800 - 0.23 11.6 10.8 1.3 9.2 0.0 4.8 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF48800 - 0.42 11.6 29.7 5.4 8.1 0.5 7.0 6 1 1 7 7 7 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF48800 - 0.42 11.4 0.0 0.28 11.9 0.1 6.7 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF48800 - 0.73 10.3 8.4 40 4.9 0.0 5.1 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF48800 - 1.4 9.3 12.7 2.3 8.6 0.2 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat HWE_HK PF07536.14 ORF48800 - 9.8 7.0 7.3 47 4.8 0.7 4.1 3 1 1 4 4 4 0 HWE histidine kinase HSP90 PF00183.18 ORF28949 - 2.7e-123 412.6 10.8 1.5e-122 410.2 10.8 1.9 1 1 0 1 1 1 1 Hsp90 protein HATPase_c_3 PF13589.6 ORF28949 - 2.4e-12 46.9 0.1 4.6e-12 45.9 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 ORF28949 - 2.9e-09 37.4 0.0 5.1e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECH_1 PF00378.20 ORF1695 - 4.1e-09 36.1 0.5 1.9e-08 33.9 0.2 2.3 2 1 0 2 2 2 1 Enoyl-CoA hydratase/isomerase TPR_12 PF13424.6 ORF1695 - 1.3e-06 28.5 25.0 0.0038 17.5 1.0 5.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF1695 - 0.025 15.1 0.1 0.025 15.1 0.1 5.5 3 2 2 5 5 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF1695 - 0.16 11.9 0.0 0.16 11.9 0.0 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF1695 - 0.23 11.6 10.8 1.3 9.2 0.0 4.8 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF1695 - 0.42 11.6 29.7 5.4 8.1 0.5 7.0 6 1 1 7 7 7 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF1695 - 0.42 11.4 0.0 0.28 11.9 0.1 6.7 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF1695 - 0.73 10.3 8.4 40 4.9 0.0 5.1 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF1695 - 1.4 9.3 12.7 2.3 8.6 0.2 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat HWE_HK PF07536.14 ORF1695 - 9.8 7.0 7.3 47 4.8 0.7 4.1 3 1 1 4 4 4 0 HWE histidine kinase PEP-utilizers_C PF02896.18 ORF9311 - 5.2e-90 301.5 0.1 6.6e-90 301.2 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF9311 - 7.6e-26 89.6 4.0 7.6e-26 89.6 4.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPDK_N PF01326.19 ORF9311 - 5.9e-12 45.5 0.1 9.7e-12 44.8 0.1 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MipA PF06629.12 ORF9311 - 0.18 12.0 0.0 0.33 11.2 0.0 1.4 1 0 0 1 1 1 0 MltA-interacting protein MipA UPF0029 PF01205.19 ORF69754 - 5.4e-17 62.1 0.0 1.1e-16 61.1 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF600 PF04634.12 ORF69754 - 6.9 6.7 9.9 0.11 12.6 0.4 2.6 3 0 0 3 3 3 0 Protein of unknown function, DUF600 PEP-utilizers_C PF02896.18 ORF6453 - 5.2e-90 301.5 0.1 6.6e-90 301.2 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF6453 - 7.6e-26 89.6 4.0 7.6e-26 89.6 4.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPDK_N PF01326.19 ORF6453 - 5.9e-12 45.5 0.1 9.7e-12 44.8 0.1 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MipA PF06629.12 ORF6453 - 0.18 12.0 0.0 0.33 11.2 0.0 1.4 1 0 0 1 1 1 0 MltA-interacting protein MipA TPR_12 PF13424.6 ORF36914 - 2.2e-11 43.9 0.8 1.9e-08 34.5 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF36914 - 7e-06 25.8 17.2 0.0086 16.2 0.4 6.4 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF36914 - 9.7e-06 25.2 11.4 1.5e-05 24.6 0.5 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF36914 - 1.3e-05 25.4 4.7 5e-05 23.5 1.7 3.0 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 ORF36914 - 1.9e-05 24.4 11.2 0.00029 20.7 0.2 5.7 5 1 1 6 6 6 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF36914 - 9.1e-05 22.2 0.2 0.094 12.8 0.0 3.3 2 0 0 2 2 2 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 ORF36914 - 0.0029 17.0 0.4 0.024 14.1 0.0 2.7 3 0 0 3 3 3 1 SHNi-TPR TPR_11 PF13414.6 ORF36914 - 0.027 14.1 1.7 0.077 12.7 0.8 2.4 2 1 0 2 2 2 0 TPR repeat TPR_6 PF13174.6 ORF36914 - 0.28 11.9 1.2 3 8.7 0.0 3.4 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF5398 PF17376.2 ORF36914 - 0.4 11.3 0.1 0.4 11.3 0.1 3.7 2 1 2 4 4 4 0 Family of unknown function (DUF5398) PEP-utilizers_C PF02896.18 ORF16950 - 5.2e-90 301.5 0.1 6.6e-90 301.2 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF16950 - 7.6e-26 89.6 4.0 7.6e-26 89.6 4.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPDK_N PF01326.19 ORF16950 - 5.9e-12 45.5 0.1 9.7e-12 44.8 0.1 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MipA PF06629.12 ORF16950 - 0.18 12.0 0.0 0.33 11.2 0.0 1.4 1 0 0 1 1 1 0 MltA-interacting protein MipA PEP-utilizers_C PF02896.18 ORF111850 - 5.2e-90 301.5 0.1 6.6e-90 301.2 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF111850 - 7.6e-26 89.6 4.0 7.6e-26 89.6 4.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPDK_N PF01326.19 ORF111850 - 5.9e-12 45.5 0.1 9.7e-12 44.8 0.1 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MipA PF06629.12 ORF111850 - 0.18 12.0 0.0 0.33 11.2 0.0 1.4 1 0 0 1 1 1 0 MltA-interacting protein MipA Strep_SA_rep PF06696.11 ORF110457 - 0.36 10.9 8.1 0.62 10.1 4.2 3.0 2 0 0 2 2 2 0 Streptococcal surface antigen repeat EF-hand_7 PF13499.6 ORF89449 - 0.0097 16.3 0.0 0.46 11.0 0.0 2.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF89449 - 0.045 13.7 0.0 27 5.1 0.0 3.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 ORF89449 - 0.11 12.1 0.0 1.4 8.6 0.0 2.7 3 0 0 3 3 3 0 EF hand EF-hand_8 PF13833.6 ORF89449 - 0.12 12.3 0.0 12 5.8 0.0 3.1 2 1 1 3 3 3 0 EF-hand domain pair Kin17_mid PF10357.9 ORF59456 - 0.044 13.7 0.0 0.094 12.6 0.0 1.5 1 0 0 1 1 1 0 Domain of Kin17 curved DNA-binding protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks8.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks8.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks8.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks8.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:15:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- 7TM_GPCR_Srx PF10328.9 NODE_33694_length_644_cov_60.246305_g26858_i0reverse_frame_1 - 0.2 11.2 2.2 0.28 10.8 0.6 1.8 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srx NblA PF04485.12 NODE_33660_length_645_cov_2.095082_g26826_i0reverse_frame_1 - 0.033 14.6 4.7 0.1 13.0 4.7 1.7 1 0 0 1 1 1 0 Phycobilisome degradation protein nblA L27 PF02828.16 NODE_33617_length_645_cov_308.016393_g26785_i0forward_frame_1 - 0.12 12.2 0.4 0.12 12.2 0.4 2.0 2 0 0 2 2 2 0 L27 domain IMS PF00817.20 NODE_33607_length_646_cov_2.011457_g26777_i0forward_frame_3 - 2e-27 96.1 0.0 4.1e-27 95.0 0.0 1.5 1 0 0 1 1 1 1 impB/mucB/samB family IMS_HHH PF11798.8 NODE_33607_length_646_cov_2.011457_g26777_i0forward_frame_3 - 2.4e-07 30.7 0.0 1e-06 28.7 0.0 2.1 1 0 0 1 1 1 1 IMS family HHH motif DNA_pol_lambd_f PF10391.9 NODE_33607_length_646_cov_2.011457_g26777_i0forward_frame_3 - 0.00029 20.6 2.5 0.0038 17.0 0.0 2.8 3 1 0 3 3 3 1 Fingers domain of DNA polymerase lambda DUF4332 PF14229.6 NODE_33607_length_646_cov_2.011457_g26777_i0forward_frame_3 - 0.027 14.7 0.1 0.063 13.5 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) Cdd1 PF11731.8 NODE_33607_length_646_cov_2.011457_g26777_i0forward_frame_3 - 0.11 12.8 0.0 0.46 10.8 0.0 2.1 3 0 0 3 3 3 0 Pathogenicity locus Acyl-CoA_ox_N PF14749.6 NODE_33603_length_646_cov_3.067103_g26774_i1forward_frame_2 - 1.9e-10 41.4 0.0 2.7e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Acyl-CoA_dh_M PF02770.19 NODE_33603_length_646_cov_3.067103_g26774_i1forward_frame_2 - 0.0003 20.9 0.0 0.0005 20.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_ox_N PF14749.6 NODE_33602_length_646_cov_3.099836_g26774_i0reverse_frame_2 - 3.4e-09 37.3 0.0 5.4e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Acyl-CoA_dh_M PF02770.19 NODE_33602_length_646_cov_3.099836_g26774_i0reverse_frame_2 - 0.00029 21.0 0.0 0.0005 20.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Toxin_28 PF08115.11 NODE_33596_length_646_cov_76.880524_g26768_i0forward_frame_3 - 0.16 11.8 0.3 0.29 11.0 0.3 1.3 1 0 0 1 1 1 0 SFI toxin family RdRP_3 PF00998.23 NODE_33588_length_646_cov_94.098200_g26760_i0reverse_frame_3 - 0.1 11.3 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Viral RNA dependent RNA polymerase DUF3493 PF11998.8 NODE_33588_length_646_cov_94.098200_g26760_i0forward_frame_3 - 0.047 13.9 0.3 0.084 13.0 0.3 1.4 1 0 0 1 1 1 0 Low psii accumulation1 / Rep27 Collagen PF01391.18 NODE_33587_length_646_cov_94.320786_g26759_i0reverse_frame_3 - 5.8 6.7 10.5 0.082 12.7 3.4 1.5 2 0 0 2 2 2 0 Collagen triple helix repeat (20 copies) Recep_L_domain PF01030.24 NODE_33587_length_646_cov_94.320786_g26759_i0forward_frame_2 - 0.086 13.0 1.0 0.14 12.2 1.0 1.3 1 0 0 1 1 1 0 Receptor L domain zf-H2C2_2 PF13465.6 NODE_33584_length_646_cov_105.726678_g26755_i1reverse_frame_2 - 8.2e-07 29.2 0.4 8.2e-07 29.2 0.4 3.4 4 0 0 4 4 4 1 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_33584_length_646_cov_105.726678_g26755_i1reverse_frame_2 - 2.1e-06 27.9 11.7 0.00024 21.4 1.8 3.3 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_33584_length_646_cov_105.726678_g26755_i1reverse_frame_2 - 0.00026 21.6 9.4 0.012 16.4 1.1 3.3 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 NODE_33584_length_646_cov_105.726678_g26755_i1reverse_frame_2 - 0.034 14.4 2.0 0.067 13.5 2.0 1.5 1 0 0 1 1 1 0 C2H2-type zinc ribbon zf-C2HC_2 PF13913.6 NODE_33584_length_646_cov_105.726678_g26755_i1reverse_frame_2 - 0.064 13.2 2.4 9.3 6.3 0.1 2.7 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-C2H2_6 PF13912.6 NODE_33584_length_646_cov_105.726678_g26755_i1reverse_frame_2 - 0.31 11.1 6.5 0.11 12.6 1.6 2.5 2 1 0 2 2 2 0 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_33582_length_646_cov_108.731588_g26755_i0reverse_frame_2 - 6.6e-07 29.4 12.2 7.1e-05 23.0 2.1 3.3 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_33582_length_646_cov_108.731588_g26755_i0reverse_frame_2 - 8.2e-07 29.2 0.4 8.2e-07 29.2 0.4 3.7 4 1 0 4 4 4 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_33582_length_646_cov_108.731588_g26755_i0reverse_frame_2 - 0.00011 22.7 10.0 0.0044 17.7 1.4 3.3 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 NODE_33582_length_646_cov_108.731588_g26755_i0reverse_frame_2 - 0.0049 16.8 2.3 0.0049 16.8 2.3 2.5 2 1 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_8 PF15909.5 NODE_33582_length_646_cov_108.731588_g26755_i0reverse_frame_2 - 0.041 14.2 1.8 0.081 13.2 1.8 1.5 1 0 0 1 1 1 0 C2H2-type zinc ribbon zf-C2HC_2 PF13913.6 NODE_33582_length_646_cov_108.731588_g26755_i0reverse_frame_2 - 0.071 13.0 2.8 9.3 6.3 0.1 2.8 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Herpes_UL14 PF03580.14 NODE_33581_length_646_cov_113.536825_g26754_i0reverse_frame_2 - 0.6 10.4 7.4 0.28 11.4 3.5 2.0 1 1 1 2 2 2 0 Herpesvirus UL14-like protein Metallophos PF00149.28 NODE_33556_length_647_cov_2.437908_g26737_i0reverse_frame_2 - 4.6e-11 43.6 0.1 6.7e-11 43.1 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 NODE_33556_length_647_cov_2.437908_g26737_i0reverse_frame_2 - 0.0021 18.3 0.0 0.017 15.3 0.0 2.0 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain FBPase_2 PF06874.11 NODE_33556_length_647_cov_2.437908_g26737_i0reverse_frame_2 - 0.0047 15.3 0.1 0.0068 14.8 0.1 1.1 1 0 0 1 1 1 1 Firmicute fructose-1,6-bisphosphatase NDUFV3 PF15880.5 NODE_33555_length_647_cov_2.720588_g26736_i0forward_frame_2 - 0.12 12.4 3.6 0.23 11.5 3.6 1.4 1 0 0 1 1 1 0 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial DUF3433 PF11915.8 NODE_33553_length_647_cov_2.991830_g26734_i0forward_frame_2 - 0.024 15.1 0.2 0.05 14.1 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3433) FCD PF07729.12 NODE_33552_length_647_cov_3.423203_g26733_i0forward_frame_2 - 1.2e-15 58.0 0.9 2e-15 57.3 0.9 1.3 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 NODE_33552_length_647_cov_3.423203_g26733_i0forward_frame_2 - 6.1e-14 51.4 0.2 1e-13 50.7 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family LexA_DNA_bind PF01726.16 NODE_33552_length_647_cov_3.423203_g26733_i0forward_frame_2 - 0.033 14.0 0.0 0.062 13.1 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain HTH_5 PF01022.20 NODE_33552_length_647_cov_3.423203_g26733_i0forward_frame_2 - 0.1 12.5 0.0 0.29 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Herpes_env PF01673.18 NODE_33551_length_647_cov_3.645425_g26732_i0reverse_frame_3 - 0.028 13.4 0.0 0.039 12.9 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus putative major envelope glycoprotein GGACT PF06094.12 NODE_33542_length_647_cov_76.905229_g26723_i0reverse_frame_3 - 3.2e-08 34.2 0.0 4.6e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 NODE_33542_length_647_cov_76.905229_g26723_i0reverse_frame_3 - 0.00058 20.2 0.0 0.0012 19.2 0.0 1.4 1 0 0 1 1 1 1 AIG2-like family RCC1_2 PF13540.6 NODE_33530_length_647_cov_128.941176_g26711_i0forward_frame_3 - 1.8e-10 40.3 14.2 0.034 13.9 0.1 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat FAF PF11250.8 NODE_33530_length_647_cov_128.941176_g26711_i0forward_frame_3 - 0.048 13.9 0.0 18 5.7 0.0 2.4 2 0 0 2 2 2 0 Fantastic Four meristem regulator Lipocalin_7 PF14651.6 NODE_33530_length_647_cov_128.941176_g26711_i0forward_frame_3 - 0.064 13.2 2.7 0.9 9.5 0.2 3.2 1 1 2 4 4 4 0 Lipocalin / cytosolic fatty-acid binding protein family zf-CCHC_6 PF15288.6 NODE_33521_length_647_cov_256.862745_g26703_i0reverse_frame_3 - 0.5 10.2 4.4 0.45 10.4 0.3 2.8 3 0 0 3 3 3 0 Zinc knuckle zf-C3HC4 PF00097.25 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 2.6e-06 27.2 1.9 2.6e-06 27.2 1.9 2.2 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 3.4e-06 27.0 2.5 3.4e-06 27.0 2.5 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 2.5e-05 24.0 1.2 2.5e-05 24.0 1.2 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 3.2e-05 23.8 2.7 3.2e-05 23.8 2.7 2.5 2 1 0 2 2 2 1 zinc-RING finger domain zf-RING_2 PF13639.6 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 3.3e-05 24.1 1.8 3.3e-05 24.1 1.8 2.3 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_4 PF15227.6 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 8.7e-05 22.6 1.1 8.7e-05 22.6 1.1 2.0 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 0.00013 21.7 1.1 0.00034 20.4 1.1 1.7 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 0.00039 20.6 0.9 0.0012 19.0 0.9 1.9 1 0 0 1 1 1 1 RING-H2 zinc finger domain DUF5064 PF16703.5 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 0.00072 20.0 0.1 0.0013 19.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5064) zf-RING_4 PF14570.6 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 0.0065 16.2 0.8 0.023 14.5 0.8 1.9 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-C3HC4_5 PF17121.5 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 0.0075 16.1 0.7 0.018 14.9 0.7 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-B_box PF00643.24 NODE_33518_length_647_cov_322.209150_g26700_i0forward_frame_3 - 0.024 14.8 2.2 0.024 14.8 2.2 2.4 2 0 0 2 2 2 0 B-box zinc finger DUF4685 PF15737.5 NODE_33515_length_647_cov_447.874183_g26697_i0reverse_frame_2 - 0.015 15.7 4.0 0.027 14.9 4.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4685) YjhX_toxin PF09857.9 NODE_33497_length_648_cov_86.092985_g26683_i0forward_frame_3 - 0.073 13.0 0.3 0.31 11.0 0.0 2.1 2 0 0 2 2 2 0 Putative toxin of bacterial toxin-antitoxin pair ox_reductase_C PF08635.10 NODE_33491_length_648_cov_122.592170_g26677_i0reverse_frame_2 - 0.14 11.8 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain zf-RING_2 PF13639.6 NODE_33490_length_648_cov_128.075041_g26676_i0reverse_frame_2 - 0.03 14.6 2.4 0.05 13.9 2.4 1.3 1 0 0 1 1 1 0 Ring finger domain Asp PF00026.23 NODE_33488_length_648_cov_131.068515_g6421_i2reverse_frame_2 - 2.4e-22 79.8 0.1 3.5e-22 79.2 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_33488_length_648_cov_131.068515_g6421_i2reverse_frame_2 - 0.00012 22.4 0.4 0.0013 19.0 0.1 2.1 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal zf-RING_4 PF14570.6 NODE_33471_length_648_cov_499.280587_g26659_i0forward_frame_2 - 0.0098 15.7 2.3 0.0098 15.7 2.3 2.0 1 1 1 2 2 2 1 RING/Ubox like zinc-binding domain Pkinase PF00069.25 NODE_33463_length_648_cov_4327.977162_g19647_i4reverse_frame_2 - 1.2e-36 126.5 0.2 1.4e-36 126.2 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_33463_length_648_cov_4327.977162_g19647_i4reverse_frame_2 - 2.2e-25 89.4 0.1 2.7e-25 89.1 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_33463_length_648_cov_4327.977162_g19647_i4reverse_frame_2 - 0.0013 17.7 0.5 0.0017 17.4 0.5 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 NODE_33463_length_648_cov_4327.977162_g19647_i4reverse_frame_2 - 0.0072 15.7 0.1 0.013 14.9 0.1 1.6 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_33463_length_648_cov_4327.977162_g19647_i4reverse_frame_2 - 0.017 14.4 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like ubiquitin PF00240.23 ORF98510 - 0.15 11.8 0.0 0.38 10.6 0.0 1.6 1 1 0 1 1 1 0 Ubiquitin family RAMP4 PF06624.12 ORF97857 - 1.2 9.2 9.0 0.19 11.8 1.7 3.0 3 0 0 3 3 3 0 Ribosome associated membrane protein RAMP4 DASH_Dam1 PF08653.10 ORF97420 - 0.22 11.3 4.0 6.7 6.6 0.0 3.0 3 0 0 3 3 3 0 DASH complex subunit Dam1 Tma16 PF11176.8 ORF97420 - 0.57 10.1 9.4 0.28 11.0 7.0 1.6 1 1 1 2 2 2 0 Translation machinery-associated protein 16 V_ATPase_I PF01496.19 ORF97420 - 0.67 7.8 7.8 0.75 7.6 7.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Seryl_tRNA_N PF02403.22 ORF97420 - 2 8.7 10.7 0.058 13.6 2.1 2.5 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain DUF724 PF05266.14 ORF97420 - 2 8.2 13.6 0.47 10.3 7.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) T3SSipB PF16535.5 ORF97420 - 2.3 8.7 10.6 0.55 10.7 2.0 2.3 2 1 0 2 2 2 0 Type III cell invasion protein SipB TMCO5 PF14992.6 ORF97420 - 4.4 6.8 14.5 19 4.7 14.5 1.9 1 1 0 1 1 1 0 TMCO5 family TPH PF13868.6 ORF97379 - 1.5e-05 23.7 73.6 1.6e-05 23.6 73.6 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF4342 PF14242.6 ORF97379 - 2.8 8.0 4.5 3.2 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4342) RGS PF00615.19 ORF97379 - 3.2 8.0 27.3 0.38 11.0 9.0 2.7 1 1 1 2 2 2 0 Regulator of G protein signaling domain Rootletin PF15035.6 ORF9737 - 0.37 10.8 28.3 0.79 9.7 24.8 2.2 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion TPR_MLP1_2 PF07926.12 ORF9737 - 0.55 10.3 30.7 1.9 8.5 3.4 3.4 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Sec20 PF03908.13 ORF9737 - 1.4 8.9 11.3 1.6 8.7 5.0 2.6 2 0 0 2 2 2 0 Sec20 Exonuc_VII_L PF02601.15 ORF9737 - 1.7 8.1 21.8 2.7 7.5 21.6 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit FliJ PF02050.16 ORF9737 - 4.2 7.6 29.9 0.43 10.8 1.2 3.2 2 1 1 3 3 3 0 Flagellar FliJ protein ApoO PF09769.9 ORF9737 - 8.4 6.4 9.6 14 5.6 1.9 3.0 1 1 2 3 3 3 0 Apolipoprotein O PapG_C PF03628.13 ORF97361 - 0.34 10.8 1.6 21 5.0 0.1 2.3 2 0 0 2 2 2 0 PapG chaperone-binding domain LRR_4 PF12799.7 ORF93548 - 1.5e-21 76.1 19.5 3.2e-06 27.4 1.6 4.5 4 0 0 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF93548 - 2.7e-19 68.7 25.6 9.2e-06 25.3 0.6 4.8 2 1 4 6 6 6 6 Leucine rich repeat LRR_9 PF14580.6 ORF93548 - 7.4e-08 32.1 9.4 0.00044 19.8 0.5 2.7 1 1 2 3 3 3 2 Leucine-rich repeat CSTF_C PF14304.6 ORF93548 - 0.0036 16.8 2.8 0.014 15.0 0.1 3.0 3 0 0 3 3 3 1 Transcription termination and cleavage factor C-terminal LRR_6 PF13516.6 ORF93548 - 0.0044 16.9 8.1 26 5.2 0.2 6.6 7 0 0 7 7 7 1 Leucine Rich repeat LRR_1 PF00560.33 ORF93548 - 3.3 8.6 20.7 81 4.4 0.1 6.7 6 1 0 6 6 6 0 Leucine Rich Repeat GST_N_3 PF13417.6 ORF90122 - 3.3e-14 53.0 0.0 5.8e-14 52.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF90122 - 1.3e-13 51.1 0.0 2.1e-13 50.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF90122 - 1.2e-09 38.2 0.1 3.7e-09 36.7 0.2 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF90122 - 3.8e-07 30.2 0.4 6.7e-07 29.4 0.4 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF90122 - 2.6e-06 27.6 0.0 4.8e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF90122 - 6.9e-05 22.8 0.0 0.00013 21.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF90122 - 0.09 12.6 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DSPc PF00782.20 ORF89072 - 1.1e-10 41.4 0.0 1.6e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF89072 - 0.032 13.8 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase RCC1_2 PF13540.6 ORF85008 - 1.2e-10 40.9 10.2 0.092 12.6 0.1 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat AP4E_app_platf PF14807.6 ORF85008 - 0.097 13.0 0.1 2.6 8.5 0.1 2.3 2 0 0 2 2 2 0 Adaptin AP4 complex epsilon appendage platform Spectrin PF00435.21 ORF85008 - 0.097 13.2 0.0 41 4.7 0.0 3.3 4 0 0 4 4 4 0 Spectrin repeat PLN_propep PF16485.5 ORF85008 - 0.15 11.8 0.6 1.5 8.6 0.0 2.7 3 0 0 3 3 3 0 Protealysin propeptide EF-hand_1 PF00036.32 ORF83539 - 5.1e-30 100.8 7.3 1.9e-07 30.1 0.2 4.5 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF83539 - 1.4e-29 102.4 3.4 2e-14 53.8 0.8 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF83539 - 9.7e-25 84.4 5.6 1.2e-07 31.1 0.3 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF83539 - 4.6e-21 73.3 12.2 5.2e-06 25.7 0.2 4.6 4 1 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF83539 - 1.5e-16 59.9 11.0 9e-07 28.6 0.7 4.4 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF83539 - 6.9e-09 36.0 1.0 0.00055 20.2 0.2 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF83539 - 1e-06 28.6 3.9 0.019 14.9 0.2 2.7 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand DUF5580 PF17743.1 ORF83539 - 0.00027 19.6 0.5 0.0035 16.0 0.0 2.0 1 1 1 2 2 2 1 Family of unknown function (DUF5580) EF-hand_9 PF14658.6 ORF83539 - 0.0004 20.7 0.2 0.0076 16.6 0.0 2.6 3 1 0 3 3 2 1 EF-hand domain DUF4032 PF13224.6 ORF83539 - 0.028 14.3 0.2 0.091 12.6 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4032) DUF3349 PF11829.8 ORF83539 - 0.063 14.1 0.3 0.51 11.1 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) EFhand_Ca_insen PF08726.10 ORF83539 - 0.063 13.4 0.4 3.9 7.7 0.0 2.9 3 0 0 3 3 3 0 Ca2+ insensitive EF hand Caleosin PF05042.13 ORF83539 - 0.065 13.2 0.3 14 5.5 0.0 2.9 1 1 1 3 3 3 0 Caleosin related protein CemA PF03040.14 ORF83539 - 0.19 11.6 0.5 0.3 11.0 0.5 1.2 1 0 0 1 1 1 0 CemA family Dockerin_1 PF00404.18 ORF83539 - 0.36 11.0 4.2 1.4 9.2 0.2 3.5 3 1 2 5 5 5 0 Dockerin type I domain Alba PF01918.21 ORF82020 - 1.4e-15 56.9 0.1 2e-15 56.4 0.1 1.3 1 0 0 1 1 1 1 Alba EF-hand_6 PF13405.6 ORF81502 - 0.0017 18.2 0.4 0.01 15.7 0.4 2.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF81502 - 0.024 14.2 6.5 0.024 14.1 0.2 3.8 4 0 0 4 4 4 0 EF hand EF-hand_7 PF13499.6 ORF81502 - 0.98 9.9 10.8 1.2 9.6 8.2 2.7 2 1 0 2 2 2 0 EF-hand domain pair AAA_lid_3 PF17862.1 ORF8060 - 0.077 12.8 0.3 0.24 11.2 0.1 2.0 2 0 0 2 2 2 0 AAA+ lid domain Peptidase_S28 PF05577.12 ORF80380 - 2.8e-17 62.7 0.0 1.1e-16 60.6 0.0 1.7 1 1 0 1 1 1 1 Serine carboxypeptidase S28 CTP_transf_like PF01467.26 ORF80319 - 1.1e-22 80.8 0.0 1.4e-22 80.4 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like Citrate_ly_lig PF08218.11 ORF80319 - 3.1e-06 27.0 0.1 9.3e-06 25.4 0.0 1.8 1 1 2 3 3 3 1 Citrate lyase ligase C-terminal domain DUF3388 PF11868.8 ORF80319 - 0.13 11.6 0.0 0.45 9.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3388) YbgT_YccB PF08173.11 ORF80105 - 0.37 11.0 1.9 1 9.5 1.9 1.8 1 0 0 1 1 1 0 Membrane bound YbgT-like protein adh_short PF00106.25 ORF7995 - 3.6e-22 78.8 0.0 4.8e-22 78.4 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF7995 - 2.9e-16 59.7 0.0 3.4e-16 59.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.10 ORF7995 - 0.036 13.4 0.0 0.063 12.6 0.0 1.5 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) Hydrophob_seed PF14547.6 ORF7995 - 0.055 13.7 0.1 0.094 12.9 0.1 1.5 1 0 0 1 1 1 0 Hydrophobic seed protein Kelch_4 PF13418.6 ORF79852 - 3.7e-18 65.3 4.9 1.4e-06 28.2 0.1 4.4 4 1 0 4 4 4 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF79852 - 4.3e-18 64.6 4.0 1.4e-06 27.8 0.0 4.3 4 0 0 4 4 4 4 Kelch motif Kelch_6 PF13964.6 ORF79852 - 4.6e-18 64.8 3.6 2.9e-06 27.3 0.0 4.2 3 1 1 4 4 4 4 Kelch motif Kelch_3 PF13415.6 ORF79852 - 1.6e-12 47.3 2.7 3.5e-07 30.3 0.0 4.5 4 1 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF79852 - 1.9e-08 34.1 0.6 0.0082 16.1 0.0 3.8 4 0 0 4 4 4 2 Kelch motif WYL_2 PF10902.8 ORF79852 - 0.049 14.0 0.2 0.49 10.8 0.0 2.3 2 0 0 2 2 2 0 WYL_2, Sm-like SH3 beta-barrel fold Hexapep PF00132.24 ORF77226 - 1.4e-06 27.8 1.6 0.0018 17.9 0.2 3.3 3 1 0 4 4 4 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF77226 - 0.043 13.6 0.9 6.5 6.6 0.1 2.7 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase N_BRCA1_IG PF16158.5 ORF77064 - 1.3e-08 35.4 0.0 2.1e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene DnaJ PF00226.31 ORF75838 - 3.5e-12 46.3 0.0 8.8e-12 45.0 0.0 1.7 1 0 0 1 1 1 1 DnaJ domain DUF4510 PF14971.6 ORF75838 - 5.8 7.2 13.6 3.6 7.9 7.7 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4510) DUF1126 PF06565.12 ORF7536 - 0.027 14.3 0.3 0.046 13.5 0.3 1.3 1 0 0 1 1 1 0 DUF1126 PH-like domain Lipocalin PF00061.23 ORF7536 - 0.055 13.7 3.3 0.086 13.0 0.7 2.3 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family TrmB PF01978.19 ORF73891 - 0.012 15.5 0.0 0.041 13.8 0.1 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF2721 PF11026.8 ORF73891 - 0.02 14.8 0.2 0.031 14.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) PMP22_Claudin PF00822.20 ORF73891 - 0.021 14.7 0.0 0.026 14.4 0.0 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family BRI3BP PF14965.6 ORF73891 - 0.042 13.4 0.2 0.08 12.4 0.2 1.5 1 1 0 1 1 1 0 Negative regulator of p53/TP53 DUF4265 PF14085.6 ORF71661 - 0.16 12.0 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) Pro_isomerase PF00160.21 ORF71429 - 2.6e-15 57.0 0.0 4.2e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rotamase_3 PF13616.6 ORF71429 - 2.8e-11 44.0 0.0 4.6e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.21 ORF71429 - 5.6e-11 43.2 0.0 1.1e-10 42.3 0.0 1.5 1 0 0 1 1 1 1 PPIC-type PPIASE domain SpoIIIAH PF12685.7 ORF69365 - 0.0013 18.6 4.1 0.0021 17.9 4.1 1.3 1 0 0 1 1 1 1 SpoIIIAH-like protein DUF4330 PF14221.6 ORF69365 - 0.0046 17.2 0.1 0.016 15.4 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4330) SARAF PF06682.12 ORF69365 - 0.0057 16.4 0.0 0.0075 16.0 0.0 1.3 1 0 0 1 1 1 1 SOCE-associated regulatory factor of calcium homoeostasis Chordopox_A13L PF05961.11 ORF69365 - 0.0076 16.5 1.9 0.075 13.3 0.0 2.8 3 0 0 3 3 3 1 Chordopoxvirus A13L protein DUF5385 PF17359.2 ORF69365 - 0.014 14.9 2.0 0.018 14.6 0.0 2.0 2 1 0 2 2 2 0 Family of unknown function (DUF5385) SKG6 PF08693.10 ORF69365 - 0.12 11.8 3.4 0.27 10.7 3.4 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain EphA2_TM PF14575.6 ORF69365 - 0.14 13.1 0.1 0.38 11.7 0.1 2.0 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ODV-E18 PF10717.9 ORF69365 - 0.22 11.4 0.0 0.22 11.4 0.0 2.1 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 FAM176 PF14851.6 ORF69365 - 5.8 6.6 6.6 77 2.9 6.6 2.3 1 1 0 1 1 1 0 FAM176 family UPF0564 PF10595.9 ORF68810 - 5.7e-42 144.1 22.3 7e-42 143.8 22.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0564 FSA_C PF10479.9 ORF68810 - 0.21 9.7 0.6 0.28 9.3 0.6 1.2 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Snf7 PF03357.21 ORF68230 - 8.5e-19 67.8 27.9 8.5e-19 67.8 27.9 1.8 2 1 1 3 3 3 1 Snf7 DSBA PF01323.20 ORF68230 - 0.055 13.2 5.4 0.065 13.0 4.2 1.7 1 1 1 2 2 2 0 DSBA-like thioredoxin domain DUF2795 PF11387.8 ORF68230 - 0.09 13.0 0.7 0.56 10.5 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2795) DUF2258 PF10015.9 ORF68230 - 0.091 12.9 0.5 0.091 12.9 0.5 2.2 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) YtxH PF12732.7 ORF68230 - 9.9 6.8 16.3 1.5e+04 -3.4 16.3 3.3 1 1 0 1 1 1 0 YtxH-like protein EamA PF00892.20 ORF66486 - 0.036 14.3 18.2 0.11 12.7 18.2 1.9 1 1 0 1 1 1 0 EamA-like transporter family TMEM238 PF15125.6 ORF66486 - 0.081 13.1 0.2 0.081 13.1 0.2 3.2 3 0 0 3 3 3 0 TMEM238 protein family DUF5438 PF17506.2 ORF66486 - 0.86 10.0 5.9 0.82 10.0 0.8 2.6 2 1 0 2 2 2 0 Family of unknown function (DUF5438) DUF480 PF04337.12 ORF65478 - 1.9e-63 213.1 0.4 3e-63 212.4 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF480 PKcGMP_CC PF16808.5 ORF65478 - 0.051 13.4 0.2 0.17 11.7 0.2 2.0 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase CREPT PF16566.5 ORF65478 - 0.068 13.3 0.2 0.15 12.2 0.0 1.6 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour ANAPC2 PF08672.11 ORF65478 - 0.26 11.8 0.8 1.9 9.1 0.0 2.5 3 0 0 3 3 3 0 Anaphase promoting complex (APC) subunit 2 Lactamase_B PF00753.27 ORF64426 - 8e-34 117.4 0.6 9e-34 117.2 0.6 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 ORF64426 - 0.00065 19.3 0.0 0.00081 19.0 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_5 PF14597.6 ORF64426 - 0.00087 18.8 0.0 0.028 13.9 0.0 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Pkinase PF00069.25 ORF6416 - 2.8e-44 151.5 0.0 3.3e-44 151.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6416 - 1.8e-33 116.0 0.0 2e-33 115.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF6416 - 1.5e-05 24.5 0.0 3.2e-05 23.4 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF6416 - 6.7e-05 21.8 0.0 0.0001 21.3 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF6416 - 0.031 14.2 0.1 0.044 13.7 0.1 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF6416 - 0.057 12.5 0.1 0.089 11.8 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 GST_N_3 PF13417.6 ORF62967 - 7.5e-14 51.9 0.0 1.4e-13 51.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF62967 - 1.4e-13 50.9 0.0 2.3e-13 50.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF62967 - 1.8e-09 37.7 0.2 3.7e-09 36.7 0.2 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF62967 - 3.4e-07 30.4 0.4 7e-07 29.4 0.4 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF62967 - 1.1e-06 28.8 0.0 2.1e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF62967 - 6.9e-05 22.8 0.0 0.00013 21.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF62967 - 0.088 12.6 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain YbgT_YccB PF08173.11 ORF59183 - 0.37 11.0 1.9 1 9.5 1.9 1.8 1 0 0 1 1 1 0 Membrane bound YbgT-like protein MORN PF02493.20 ORF58292 - 4.2e-29 98.7 36.2 1.5e-06 27.7 0.7 7.4 7 0 0 7 7 7 7 MORN repeat EF-hand_6 PF13405.6 ORF57619 - 0.0017 18.2 0.4 0.01 15.7 0.4 2.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF57619 - 0.024 14.2 6.5 0.024 14.1 0.2 3.8 4 0 0 4 4 4 0 EF hand EF-hand_7 PF13499.6 ORF57619 - 0.98 9.9 10.8 1.2 9.6 8.2 2.7 2 1 0 2 2 2 0 EF-hand domain pair Motile_Sperm PF00635.26 ORF57594 - 8.1e-17 61.0 8.3 1.4e-16 60.3 6.4 2.0 2 0 0 2 2 2 1 MSP (Major sperm protein) domain DUF5001 PF16392.5 ORF57594 - 0.022 14.6 1.1 0.022 14.6 1.1 1.6 2 0 0 2 2 2 0 Ig-like domain TTL PF03133.15 ORF56421 - 3.4e-39 134.7 0.2 4.3e-39 134.4 0.2 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATP-grasp_3 PF02655.14 ORF56421 - 0.00032 20.8 0.0 0.00049 20.2 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 ORF56421 - 0.18 11.0 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Cytochrome_CBB3 PF13442.6 ORF5353 - 0.17 12.3 0.8 0.29 11.5 0.8 1.4 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III EF-hand_1 PF00036.32 ORF5266 - 5.1e-30 100.8 7.3 1.9e-07 30.1 0.2 4.5 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF5266 - 1.4e-29 102.4 3.4 2e-14 53.8 0.8 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF5266 - 9.7e-25 84.4 5.6 1.2e-07 31.1 0.3 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF5266 - 4.6e-21 73.3 12.2 5.2e-06 25.7 0.2 4.6 4 1 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF5266 - 1.5e-16 59.9 11.0 9e-07 28.6 0.7 4.4 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF5266 - 6.9e-09 36.0 1.0 0.00055 20.2 0.2 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF5266 - 1e-06 28.6 3.9 0.019 14.9 0.2 2.7 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand DUF5580 PF17743.1 ORF5266 - 0.00027 19.6 0.5 0.0035 16.0 0.0 2.0 1 1 1 2 2 2 1 Family of unknown function (DUF5580) EF-hand_9 PF14658.6 ORF5266 - 0.0004 20.7 0.2 0.0076 16.6 0.0 2.6 3 1 0 3 3 2 1 EF-hand domain DUF4032 PF13224.6 ORF5266 - 0.028 14.3 0.2 0.091 12.6 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4032) DUF3349 PF11829.8 ORF5266 - 0.063 14.1 0.3 0.51 11.1 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) EFhand_Ca_insen PF08726.10 ORF5266 - 0.063 13.4 0.4 3.9 7.7 0.0 2.9 3 0 0 3 3 3 0 Ca2+ insensitive EF hand Caleosin PF05042.13 ORF5266 - 0.065 13.2 0.3 14 5.5 0.0 2.9 1 1 1 3 3 3 0 Caleosin related protein CemA PF03040.14 ORF5266 - 0.19 11.6 0.5 0.3 11.0 0.5 1.2 1 0 0 1 1 1 0 CemA family Dockerin_1 PF00404.18 ORF5266 - 0.36 11.0 4.2 1.4 9.2 0.2 3.5 3 1 2 5 5 5 0 Dockerin type I domain Cupin_8 PF13621.6 ORF50820 - 1.7e-16 60.7 0.0 3e-16 59.9 0.0 1.3 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF50820 - 8.1e-06 25.5 0.1 1.3e-05 24.9 0.1 1.2 1 0 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF50820 - 0.0011 19.4 0.3 0.051 14.0 0.3 2.3 1 1 0 1 1 1 1 JmjC domain, hydroxylase SNF PF00209.18 ORF49762 - 9e-24 84.0 12.2 9.9e-24 83.9 12.2 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF1068 PF06364.12 ORF48712 - 0.024 14.5 0.4 8 6.3 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1068) Ank_5 PF13857.6 ORF47414 - 1.6e-11 44.2 0.2 6.7e-11 42.2 0.1 2.0 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF47414 - 1e-10 41.9 1.0 1.2e-05 25.7 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF47414 - 2.8e-08 34.2 0.0 4.7e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF47414 - 3e-07 30.6 0.1 1.1e-06 28.8 0.2 1.9 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 ORF47414 - 9.2e-07 28.7 0.1 2.9e-06 27.2 0.1 1.9 1 0 0 1 1 1 1 Ankyrin repeat Methyltransf_12 PF08242.12 ORF46455 - 4.7e-07 30.5 0.0 7.6e-07 29.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF46455 - 5.7e-06 27.0 0.0 1.9e-05 25.3 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF46455 - 7.1e-05 22.6 0.0 9.6e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF46455 - 0.0047 17.6 0.0 0.016 15.8 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain CheR PF01739.18 ORF46455 - 0.016 14.7 0.0 2.1 7.8 0.0 2.5 3 0 0 3 3 3 0 CheR methyltransferase, SAM binding domain TTL PF03133.15 ORF44619 - 3.4e-39 134.7 0.2 4.3e-39 134.4 0.2 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATP-grasp_3 PF02655.14 ORF44619 - 0.00032 20.8 0.0 0.00049 20.2 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 ORF44619 - 0.18 11.0 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Apolipoprotein PF01442.18 ORF43027 - 0.0038 17.1 1.8 0.0071 16.2 1.8 1.4 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF4140 PF13600.6 ORF43027 - 0.18 12.2 2.0 11 6.6 0.0 2.7 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) SVIP PF15811.5 ORF43027 - 8.6 6.9 8.8 7.9 7.0 0.4 2.5 2 0 0 2 2 2 0 Small VCP/p97-interacting protein DUF5541 PF17695.1 ORF42038 - 0.08 13.4 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5541) DUF1438 PF07270.11 ORF42038 - 0.097 12.8 1.8 0.13 12.3 1.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1438) YbgT_YccB PF08173.11 ORF40963 - 0.37 11.0 1.9 1 9.5 1.9 1.8 1 0 0 1 1 1 0 Membrane bound YbgT-like protein EamA PF00892.20 ORF38847 - 2.4e-06 27.7 10.9 2.4e-06 27.7 10.9 2.2 3 0 0 3 3 3 1 EamA-like transporter family Exo_endo_phos PF03372.23 ORF37716 - 0.028 13.9 0.0 0.029 13.9 0.0 1.4 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family DJ-1_PfpI PF01965.24 ORF37427 - 1.5e-31 109.4 0.0 1.8e-31 109.2 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family EF-hand_6 PF13405.6 ORF36821 - 0.0017 18.2 0.4 0.01 15.7 0.4 2.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF36821 - 0.024 14.2 6.5 0.024 14.1 0.2 3.8 4 0 0 4 4 4 0 EF hand EF-hand_7 PF13499.6 ORF36821 - 0.98 9.9 10.8 1.2 9.6 8.2 2.7 2 1 0 2 2 2 0 EF-hand domain pair UIM PF02809.20 ORF3647 - 1.7e-07 30.6 11.5 0.0025 17.6 1.0 3.0 2 0 0 2 2 2 2 Ubiquitin interaction motif DUF2793 PF10983.8 ORF3647 - 0.012 15.5 1.2 1.9 8.4 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2793) MaoC_dehydratas PF01575.19 ORF36184 - 4.6e-28 97.2 0.0 6e-28 96.9 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain Nmad3 PF18754.1 ORF36184 - 0.1 12.2 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Nucleotide modification associated domain 3 YbgT_YccB PF08173.11 ORF35480 - 0.37 11.0 1.9 1 9.5 1.9 1.8 1 0 0 1 1 1 0 Membrane bound YbgT-like protein Arteri_GP4 PF02497.15 ORF34285 - 0.19 11.9 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 Arterivirus glycoprotein DUF3729 PF12526.8 ORF34285 - 0.56 11.8 5.8 0.97 11.0 5.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3729) TPH PF13868.6 ORF31905 - 1.5e-05 23.7 73.6 1.6e-05 23.6 73.6 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF4342 PF14242.6 ORF31905 - 2.8 8.0 4.5 3.2 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4342) RGS PF00615.19 ORF31905 - 3.2 8.0 27.3 0.38 11.0 9.0 2.7 1 1 1 2 2 2 0 Regulator of G protein signaling domain MORN PF02493.20 ORF29795 - 3.7e-05 23.4 6.6 0.00035 20.3 0.3 3.9 5 0 0 5 5 5 2 MORN repeat BPD_transp_1 PF00528.22 ORF29212 - 3e-24 85.8 11.1 3.7e-24 85.5 11.1 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component YbgT_YccB PF08173.11 ORF25994 - 0.37 11.0 1.9 1 9.5 1.9 1.8 1 0 0 1 1 1 0 Membrane bound YbgT-like protein RRM_1 PF00076.22 ORF25204 - 6.9e-08 32.2 0.0 1.2e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) adh_short PF00106.25 ORF24236 - 1e-29 103.4 0.0 1.3e-29 103.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF24236 - 5.3e-24 85.1 0.0 6.5e-24 84.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF24236 - 1.2e-08 35.0 0.0 1.8e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF24236 - 0.0007 19.1 0.0 0.00091 18.7 0.0 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) Hexapep PF00132.24 ORF22802 - 1.4e-06 27.8 1.6 0.0018 17.9 0.2 3.3 3 1 0 4 4 4 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF22802 - 0.043 13.6 0.9 6.5 6.6 0.1 2.7 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase Ig_GlcNase PF18368.1 ORF18075 - 0.2 11.8 0.2 0.34 11.1 0.2 1.4 1 0 0 1 1 1 0 Exo-beta-D-glucosaminidase Ig-fold domain Pro_isomerase PF00160.21 ORF17303 - 4e-11 43.4 0.0 1.5e-10 41.5 0.0 1.8 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WW_FCH_linker PF16623.5 ORF17303 - 0.024 15.4 0.2 0.044 14.5 0.2 1.4 1 0 0 1 1 1 0 Unstructured linker region between on GAS7 protein PTN_MK_C PF01091.18 ORF16658 - 0.34 11.3 2.3 1.1 9.7 0.0 2.4 2 1 0 2 2 2 0 PTN/MK heparin-binding protein family, C-terminal domain EF-hand_1 PF00036.32 ORF16033 - 5.1e-30 100.8 7.3 1.9e-07 30.1 0.2 4.5 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF16033 - 1.4e-29 102.4 3.4 2e-14 53.8 0.8 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF16033 - 9.7e-25 84.4 5.6 1.2e-07 31.1 0.3 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF16033 - 4.6e-21 73.3 12.2 5.2e-06 25.7 0.2 4.6 4 1 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF16033 - 1.5e-16 59.9 11.0 9e-07 28.6 0.7 4.4 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF16033 - 6.9e-09 36.0 1.0 0.00055 20.2 0.2 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF16033 - 1e-06 28.6 3.9 0.019 14.9 0.2 2.7 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand DUF5580 PF17743.1 ORF16033 - 0.00027 19.6 0.5 0.0035 16.0 0.0 2.0 1 1 1 2 2 2 1 Family of unknown function (DUF5580) EF-hand_9 PF14658.6 ORF16033 - 0.0004 20.7 0.2 0.0076 16.6 0.0 2.6 3 1 0 3 3 2 1 EF-hand domain DUF4032 PF13224.6 ORF16033 - 0.028 14.3 0.2 0.091 12.6 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4032) DUF3349 PF11829.8 ORF16033 - 0.063 14.1 0.3 0.51 11.1 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) EFhand_Ca_insen PF08726.10 ORF16033 - 0.063 13.4 0.4 3.9 7.7 0.0 2.9 3 0 0 3 3 3 0 Ca2+ insensitive EF hand Caleosin PF05042.13 ORF16033 - 0.065 13.2 0.3 14 5.5 0.0 2.9 1 1 1 3 3 3 0 Caleosin related protein CemA PF03040.14 ORF16033 - 0.19 11.6 0.5 0.3 11.0 0.5 1.2 1 0 0 1 1 1 0 CemA family Dockerin_1 PF00404.18 ORF16033 - 0.36 11.0 4.2 1.4 9.2 0.2 3.5 3 1 2 5 5 5 0 Dockerin type I domain DnaJ PF00226.31 ORF13657 - 1.1e-13 51.1 0.1 2.1e-13 50.2 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain TM2 PF05154.16 ORF13657 - 0.01 16.2 1.2 0.01 16.2 1.2 1.9 2 0 0 2 2 2 1 TM2 domain DUF3188 PF11384.8 ORF13657 - 0.052 13.3 0.1 0.12 12.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3188) HCNGP PF07818.13 ORF13648 - 0.16 12.6 0.0 0.35 11.5 0.0 1.5 1 0 0 1 1 1 0 HCNGP-like protein Cnn_1N PF07989.11 ORF135 - 0.0078 16.3 13.1 0.027 14.6 3.8 2.9 2 1 0 2 2 2 2 Centrosomin N-terminal motif 1 DUF4366 PF14283.6 ORF135 - 0.012 15.7 2.7 0.14 12.2 2.7 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4366) Peroxin-13_N PF04088.13 ORF135 - 0.013 15.7 2.0 0.047 14.0 2.0 2.1 1 1 0 1 1 1 0 Peroxin 13, N-terminal region UNC119_bdg PF15435.6 ORF135 - 0.11 12.1 1.2 0.19 11.3 0.9 1.4 1 1 0 1 1 1 0 UNC119-binding protein C5orf30 homologue XhlA PF10779.9 ORF135 - 0.85 9.9 6.8 2.7 8.3 2.1 2.7 2 0 0 2 2 2 0 Haemolysin XhlA Fez1 PF06818.15 ORF135 - 1.4 9.3 25.0 0.08 13.4 14.5 2.1 1 1 1 2 2 2 0 Fez1 V_ATPase_I PF01496.19 ORF135 - 1.8 6.3 10.4 2.8 5.8 10.4 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FUSC PF04632.12 ORF135 - 5.9 5.3 12.4 6.4 5.2 12.4 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family PPR_2 PF13041.6 ORF13033 - 3.8e-14 52.6 0.1 8e-07 29.2 0.0 3.2 1 1 2 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF13033 - 7.3e-10 38.8 0.0 0.00081 19.4 0.0 2.2 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF13033 - 1.4e-07 31.2 2.0 0.0054 16.9 0.0 4.2 4 1 0 4 4 4 1 PPR repeat PPR_1 PF12854.7 ORF13033 - 6.7e-05 22.5 0.0 0.13 12.0 0.0 3.7 4 0 0 4 4 4 1 PPR repeat PPR_long PF17177.4 ORF13033 - 0.00036 20.0 0.1 0.00071 19.0 0.1 1.4 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP TPR_14 PF13428.6 ORF13033 - 0.054 14.3 2.3 0.19 12.7 0.2 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF13033 - 0.057 13.5 1.4 6.3 7.1 0.0 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat Clathrin PF00637.20 ORF13033 - 0.18 11.7 0.0 11 5.9 0.0 2.2 2 0 0 2 2 2 0 Region in Clathrin and VPS TPR_12 PF13424.6 ORF13033 - 0.7 10.2 3.5 0.58 10.5 0.2 2.5 3 1 0 3 3 3 0 Tetratricopeptide repeat DUF5525 PF17663.1 ORF12831 - 0.0025 16.0 0.8 0.0026 15.9 0.8 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5525) DUF5134 PF17197.4 ORF112571 - 0.00051 20.0 1.3 0.00069 19.5 1.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5134) Cad PF03596.13 ORF112571 - 0.045 13.6 0.1 0.045 13.6 0.1 1.6 2 0 0 2 2 2 0 Cadmium resistance transporter Shisa PF13908.6 ORF112571 - 0.088 13.0 0.4 0.088 13.0 0.4 2.0 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator DUF2946 PF11162.8 ORF112571 - 1.9 9.2 13.2 3.9 8.2 13.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) His_Phos_1 PF00300.22 ORF112536 - 2.1e-57 194.0 0.8 2.4e-57 193.8 0.8 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PTH2 PF01981.16 ORF112536 - 0.056 13.7 0.2 0.12 12.7 0.1 1.6 1 1 1 2 2 2 0 Peptidyl-tRNA hydrolase PTH2 Abhydrolase_9 PF10081.9 ORF112536 - 0.13 11.3 0.0 0.21 10.6 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta-hydrolase family CLZ PF16526.5 ORF112128 - 0.011 16.1 15.9 0.011 16.1 15.9 2.9 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Jnk-SapK_ap_N PF09744.9 ORF112128 - 0.016 15.4 29.0 0.016 15.4 29.0 2.4 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 Spc7 PF08317.11 ORF112128 - 1.2 8.0 30.0 0.75 8.6 26.5 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein Allexi_40kDa PF05549.11 ORF112128 - 6.9 6.1 10.6 0.43 10.1 5.9 1.6 2 0 0 2 2 2 0 Allexivirus 40kDa protein BRI3BP PF14965.6 ORF112128 - 7.7 6.0 4.7 14 5.2 4.7 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 YbgT_YccB PF08173.11 ORF111577 - 0.37 11.0 1.9 1 9.5 1.9 1.8 1 0 0 1 1 1 0 Membrane bound YbgT-like protein Clathrin_H_link PF13838.6 ORF110095 - 0.04 13.8 0.1 1.2 9.1 0.0 2.6 2 0 0 2 2 2 0 Clathrin-H-link Phage_int_SAM_1 PF02899.17 ORF109010 - 0.095 13.0 1.0 0.2 12.0 1.0 1.5 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain YbgT_YccB PF08173.11 ORF107794 - 0.37 11.0 1.9 1 9.5 1.9 1.8 1 0 0 1 1 1 0 Membrane bound YbgT-like protein DUF229 PF02995.17 ORF104649 - 8e-22 77.5 4.0 1.2e-21 77.0 4.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF104649 - 2.5e-08 33.7 0.3 3.3e-08 33.3 0.3 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF104649 - 0.00065 19.4 0.0 0.00065 19.4 0.0 1.2 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Lipoprotein_11 PF03260.13 ORF104649 - 0.01 15.2 0.1 0.016 14.6 0.1 1.2 1 0 0 1 1 1 0 Lepidopteran low molecular weight (30 kD) lipoprotein DUF1501 PF07394.12 ORF104649 - 0.056 12.5 0.0 0.071 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) Fib_alpha PF08702.10 ORF103548 - 0.012 15.8 3.8 0.012 15.8 3.8 1.6 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 ORF103548 - 0.04 13.5 6.3 0.049 13.2 6.3 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit NPV_P10 PF05531.12 ORF103548 - 0.042 14.3 5.6 0.84 10.1 1.9 2.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DNA_ligase_A_N PF04675.14 ORF103548 - 0.056 13.8 4.4 0.17 12.2 4.4 1.9 1 1 0 1 1 1 0 DNA ligase N terminus Jnk-SapK_ap_N PF09744.9 ORF103548 - 0.066 13.4 10.4 0.1 12.8 10.2 1.4 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF948 PF06103.11 ORF103548 - 0.18 12.1 5.1 1.8 8.9 0.5 3.3 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) DUF4407 PF14362.6 ORF103548 - 0.3 10.4 6.5 0.38 10.1 6.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Vps51 PF08700.11 ORF103548 - 0.32 11.1 10.3 0.18 11.9 3.7 2.9 2 1 0 2 2 2 0 Vps51/Vps67 Phage_GPO PF05929.11 ORF103548 - 0.35 10.4 5.0 0.44 10.1 5.0 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF2408 PF10303.9 ORF103548 - 0.47 11.0 7.3 0.7 10.5 7.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Seryl_tRNA_N PF02403.22 ORF103548 - 0.65 10.3 8.0 5.1 7.4 8.0 2.2 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Synaptobrevin PF00957.21 ORF103548 - 0.69 9.8 3.6 0.38 10.6 0.8 1.9 2 0 0 2 2 2 0 Synaptobrevin FUSC PF04632.12 ORF103548 - 0.81 8.1 14.1 0.051 12.1 2.4 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein family Fzo_mitofusin PF04799.13 ORF103548 - 2.5 7.6 7.8 0.6 9.6 2.7 2.2 1 1 2 3 3 3 0 fzo-like conserved region DUF1664 PF07889.12 ORF103548 - 7.6 6.6 6.8 2.9 8.0 3.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 ORF103548 - 9.1 6.7 8.4 4.7 7.6 2.4 2.6 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 PPR_2 PF13041.6 ORF103029 - 3.1e-33 113.7 0.0 4.6e-07 29.9 0.0 5.3 1 1 5 6 6 6 6 PPR repeat family PPR PF01535.20 ORF103029 - 7.2e-22 76.1 0.0 8.6e-05 22.5 0.0 5.9 6 0 0 6 6 6 5 PPR repeat PPR_3 PF13812.6 ORF103029 - 6.9e-18 64.5 0.0 6.8e-06 26.1 0.0 4.2 2 1 3 5 5 5 5 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF103029 - 6.2e-15 54.6 0.0 0.00023 20.8 0.0 6.1 6 0 0 6 6 6 5 PPR repeat PPR_long PF17177.4 ORF103029 - 1.9e-05 24.1 0.0 0.053 12.9 0.0 3.0 1 1 2 3 3 3 3 Pentacotripeptide-repeat region of PRORP PAP2 PF01569.21 ORF102036 - 1.3e-05 25.0 11.8 8.1e-05 22.4 8.2 2.6 1 1 0 1 1 1 1 PAP2 superfamily FTR1 PF03239.14 ORF102036 - 0.0044 16.2 0.2 0.0044 16.2 0.2 1.7 2 0 0 2 2 2 1 Iron permease FTR1 family DUF5541 PF17695.1 ORF101768 - 0.079 13.4 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5541) DUF1438 PF07270.11 ORF101768 - 0.093 12.8 1.7 0.14 12.2 0.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1438) EF-hand_1 PF00036.32 ORF100019 - 5.1e-30 100.8 7.3 1.9e-07 30.1 0.2 4.5 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF100019 - 1.4e-29 102.4 3.4 2e-14 53.8 0.8 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF100019 - 9.7e-25 84.4 5.6 1.2e-07 31.1 0.3 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF100019 - 4.6e-21 73.3 12.2 5.2e-06 25.7 0.2 4.6 4 1 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF100019 - 1.5e-16 59.9 11.0 9e-07 28.6 0.7 4.4 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF100019 - 6.9e-09 36.0 1.0 0.00055 20.2 0.2 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF100019 - 1e-06 28.6 3.9 0.019 14.9 0.2 2.7 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand DUF5580 PF17743.1 ORF100019 - 0.00027 19.6 0.5 0.0035 16.0 0.0 2.0 1 1 1 2 2 2 1 Family of unknown function (DUF5580) EF-hand_9 PF14658.6 ORF100019 - 0.0004 20.7 0.2 0.0076 16.6 0.0 2.6 3 1 0 3 3 2 1 EF-hand domain DUF4032 PF13224.6 ORF100019 - 0.028 14.3 0.2 0.091 12.6 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4032) DUF3349 PF11829.8 ORF100019 - 0.063 14.1 0.3 0.51 11.1 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) EFhand_Ca_insen PF08726.10 ORF100019 - 0.063 13.4 0.4 3.9 7.7 0.0 2.9 3 0 0 3 3 3 0 Ca2+ insensitive EF hand Caleosin PF05042.13 ORF100019 - 0.065 13.2 0.3 14 5.5 0.0 2.9 1 1 1 3 3 3 0 Caleosin related protein CemA PF03040.14 ORF100019 - 0.19 11.6 0.5 0.3 11.0 0.5 1.2 1 0 0 1 1 1 0 CemA family Dockerin_1 PF00404.18 ORF100019 - 0.36 11.0 4.2 1.4 9.2 0.2 3.5 3 1 2 5 5 5 0 Dockerin type I domain Mx_ML PF17536.2 NODE_33880_length_640_cov_2.872727_g27022_i0forward_frame_1 - 0.011 15.5 0.1 0.025 14.3 0.0 1.6 2 0 0 2 2 2 0 Matrix and Matrix long proteins N-terminal HSP33 PF01430.19 NODE_33876_length_640_cov_55.928926_g27018_i0reverse_frame_1 - 0.017 14.6 0.8 0.69 9.3 0.1 2.1 1 1 1 2 2 2 0 Hsp33 protein DASH_Duo1 PF08651.10 NODE_33875_length_640_cov_61.039669_g27017_i0forward_frame_1 - 0.021 14.6 0.5 0.28 11.0 0.0 2.2 2 0 0 2 2 2 0 DASH complex subunit Duo1 FtsK_SpoIIIE_N PF12538.8 NODE_33871_length_640_cov_71.540496_g27014_i0reverse_frame_1 - 0.019 15.1 0.0 0.029 14.6 0.0 1.3 1 0 0 1 1 1 0 DNA transporter Actin PF00022.19 NODE_33871_length_640_cov_71.540496_g27014_i0reverse_frame_1 - 0.028 13.0 0.0 0.037 12.6 0.0 1.1 1 0 0 1 1 1 0 Actin DUF4956 PF16316.5 NODE_33862_length_640_cov_138.163636_g27006_i0forward_frame_1 - 0.0056 16.4 0.6 0.01 15.5 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4956) Adeno_E3 PF06040.11 NODE_33838_length_641_cov_68.021452_g26987_i0forward_frame_1 - 0.072 13.3 1.2 0.14 12.3 1.2 1.5 1 0 0 1 1 1 0 Adenovirus E3 protein WW PF00397.26 NODE_33835_length_641_cov_83.714521_g26984_i0forward_frame_1 - 4.3e-05 23.5 6.6 0.00013 21.9 6.6 1.9 1 0 0 1 1 1 1 WW domain DUF4113 PF13438.6 NODE_33833_length_641_cov_86.798680_g26982_i0reverse_frame_1 - 0.038 14.1 0.1 0.39 10.8 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4113) Spt5_N PF11942.8 NODE_33816_length_641_cov_201.749175_g26967_i0reverse_frame_1 - 0.018 16.0 3.9 0.018 16.0 3.9 2.0 2 0 0 2 2 2 0 Spt5 transcription elongation factor, acidic N-terminal PI3K_1B_p101 PF10486.9 NODE_33816_length_641_cov_201.749175_g26967_i0reverse_frame_1 - 0.21 9.3 9.0 0.24 9.2 9.0 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit zf-B_box PF00643.24 NODE_33772_length_642_cov_162.421746_g26927_i0reverse_frame_1 - 0.0023 18.1 9.7 0.0045 17.1 9.7 1.5 1 0 0 1 1 1 1 B-box zinc finger PRIMA1 PF16101.5 NODE_33759_length_643_cov_2.651316_g26917_i0reverse_frame_2 - 0.008 16.2 0.1 0.015 15.4 0.1 1.3 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 VEGFR-2_TMD PF17988.1 NODE_33759_length_643_cov_2.651316_g26917_i0reverse_frame_2 - 1.4 8.4 6.1 2.7 7.5 6.1 1.4 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain HD_assoc PF13286.6 NODE_33756_length_643_cov_3.108553_g26914_i0reverse_frame_2 - 0.00098 19.6 0.1 0.0059 17.1 0.0 2.3 1 1 2 3 3 3 1 Phosphohydrolase-associated domain ACP53EA PF06313.11 NODE_33753_length_643_cov_6.458882_g26911_i0reverse_frame_3 - 0.0029 17.8 0.7 0.0051 17.0 0.7 1.4 1 0 0 1 1 1 1 Drosophila ACP53EA protein Phospho_p8 PF10195.9 NODE_33753_length_643_cov_6.458882_g26911_i0reverse_frame_3 - 0.025 15.1 0.2 0.067 13.7 0.2 1.8 1 0 0 1 1 1 0 DNA-binding nuclear phosphoprotein p8 Trypan_PARP PF05887.11 NODE_33752_length_643_cov_17.560855_g26910_i0reverse_frame_3 - 0.27 11.2 5.7 0.38 10.7 5.7 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Helicase_C PF00271.31 NODE_33734_length_643_cov_137.368421_g26892_i0forward_frame_2 - 2e-08 34.5 0.1 3.3e-08 33.8 0.1 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks90.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks90.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks90.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks90.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:19:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- IncFII_repA PF02387.15 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_3 - 0.006 15.9 12.6 8.4 5.5 0.1 5.5 5 1 1 6 6 6 3 IncFII RepA protein family XAF1_C PF18608.1 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_3 - 0.0092 15.5 0.5 23 4.6 0.0 4.1 5 0 0 5 5 5 2 XIAP-associated factor 1 C-terminal domain Pam17 PF08566.10 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_3 - 0.042 13.7 13.0 0.35 10.7 1.6 2.8 1 1 2 3 3 3 0 Mitochondrial import protein Pam17 PknG_rubred PF16919.5 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_3 - 0.048 13.8 0.1 55 3.9 0.0 3.5 5 0 0 5 5 5 0 Protein kinase G rubredoxin domain EpuA PF11772.8 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_3 - 0.3 10.8 12.7 4.1 7.2 0.8 3.9 3 0 0 3 3 3 0 DNA-directed RNA polymerase subunit beta HCV_NS5a_1a PF08300.13 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_3 - 0.69 10.1 6.9 3.7 7.7 0.1 3.6 1 1 4 5 5 5 0 Hepatitis C virus non-structural 5a zinc finger domain RCC1_2 PF13540.6 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 3.2e-52 173.4 39.1 1.5e-11 43.7 1.8 5.2 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 6.7e-15 55.4 50.8 0.19 12.3 0.1 10.1 7 3 2 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat DUF5125 PF17163.4 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 3.1e-05 24.2 0.1 1.1 9.4 0.0 4.1 1 1 4 5 5 5 2 Domain of unknown function (DUF5125) FAF PF11250.8 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 0.016 15.4 0.0 85 3.5 0.0 4.3 5 0 0 5 5 5 0 Fantastic Four meristem regulator TBP PF00352.21 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 0.033 14.1 0.0 17 5.4 0.0 4.0 2 1 2 4 4 4 0 Transcription factor TFIID (or TATA-binding protein, TBP) Bombolitin PF08096.11 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 0.034 14.4 1.0 94 3.6 0.0 4.4 6 0 0 6 6 6 0 Bombolitin family PLDc PF00614.22 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 0.078 13.2 0.0 4.2 7.7 0.0 3.1 3 0 0 3 3 3 0 Phospholipase D Active site motif Peptidase_M60_C PF18630.1 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 0.099 12.8 2.3 1.1e+02 3.0 0.0 4.3 5 0 0 5 5 5 0 Peptidase M60 C-terminal domain UL73_N PF12522.8 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 0.25 11.1 14.4 22 4.9 0.1 5.0 5 0 0 5 5 5 0 Cytomegalovirus glycoprotein N terminal Kelch_4 PF13418.6 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 1.1 9.3 10.2 83 3.3 0.1 5.0 5 0 0 5 5 5 0 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_33728_length_643_cov_175.753289_g26887_i0reverse_frame_2 - 3.6 7.7 6.3 91 3.2 0.1 4.2 5 0 0 5 5 5 0 Kelch motif HD_5 PF13487.6 NODE_33728_length_643_cov_175.753289_g26887_i0forward_frame_3 - 0.34 11.2 10.0 60 4.0 0.0 5.4 3 1 3 6 6 6 0 HD domain Haem_bd PF14376.6 NODE_33728_length_643_cov_175.753289_g26887_i0forward_frame_3 - 2.6 8.0 16.3 4.1 7.3 0.4 3.6 1 1 3 4 4 4 0 Haem-binding domain Sulfotransfer_1 PF00685.27 NODE_33728_length_643_cov_175.753289_g26887_i0forward_frame_2 - 0.0018 17.8 0.0 4.7 6.6 0.0 3.4 3 1 0 3 3 3 3 Sulfotransferase domain Rhodanese_C PF12368.8 NODE_33728_length_643_cov_175.753289_g26887_i0forward_frame_2 - 0.51 10.7 8.9 2.5 8.5 3.1 2.4 2 1 0 2 2 2 0 Rhodanase C-terminal TrmO PF01980.16 NODE_33725_length_643_cov_197.531250_g26884_i0reverse_frame_3 - 0.019 15.2 0.1 0.043 14.0 0.0 1.7 2 0 0 2 2 2 0 tRNA-methyltransferase O MCLC PF05934.11 NODE_33716_length_643_cov_528.161184_g18232_i1reverse_frame_3 - 0.12 11.1 0.9 0.17 10.6 0.9 1.1 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) BNIP2 PF12496.8 NODE_33716_length_643_cov_528.161184_g18232_i1reverse_frame_3 - 1.3 9.5 6.9 0.3 11.5 1.2 2.1 2 0 0 2 2 2 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 Cyt-b5 PF00173.28 NODE_33709_length_643_cov_3007.261513_g17573_i1forward_frame_3 - 4.1e-18 65.3 0.0 6.4e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Tubulin-binding PF00418.19 NODE_33706_length_644_cov_1.822660_g26870_i0reverse_frame_2 - 0.015 15.3 0.4 0.032 14.3 0.4 1.5 1 0 0 1 1 1 0 Tau and MAP protein, tubulin-binding repeat DUF4407 PF14362.6 NODE_33706_length_644_cov_1.822660_g26870_i0forward_frame_2 - 0.95 8.8 1.7 1.6 8.0 1.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ADIP PF11559.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 3.2e-05 24.0 11.2 0.0023 18.0 0.8 3.1 1 1 2 3 3 3 2 Afadin- and alpha -actinin-Binding DUF641 PF04859.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.00013 22.3 4.3 0.12 12.7 1.0 2.7 1 1 2 3 3 2 2 Plant protein of unknown function (DUF641) DUF4201 PF13870.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.00021 21.1 12.2 0.0012 18.6 6.3 2.9 1 1 1 2 2 2 2 Domain of unknown function (DUF4201) TMF_TATA_bd PF12325.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.00088 19.5 7.5 0.047 13.9 2.5 2.8 1 1 1 2 2 2 1 TATA element modulatory factor 1 TATA binding ATG16 PF08614.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0012 19.1 17.6 0.013 15.8 8.1 2.7 1 1 1 2 2 2 2 Autophagy protein 16 (ATG16) Fez1 PF06818.15 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0015 19.0 5.4 0.0015 19.0 5.4 1.9 1 1 1 2 2 2 2 Fez1 GAS PF13851.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.002 17.5 13.3 0.017 14.5 3.9 2.5 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding bZIP_1 PF00170.21 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0022 18.0 7.5 0.87 9.7 0.4 3.6 3 0 0 3 3 3 1 bZIP transcription factor DUF1319 PF07028.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0028 17.9 6.8 0.13 12.4 1.0 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF1319) CALCOCO1 PF07888.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0039 16.1 12.2 0.082 11.8 8.1 2.0 1 1 1 2 2 2 2 Calcium binding and coiled-coil domain (CALCOCO1) like TPR_MLP1_2 PF07926.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0052 16.9 6.4 0.0052 16.9 6.4 2.8 1 1 1 2 2 2 1 TPR/MLP1/MLP2-like protein ABC_tran_CTD PF16326.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0085 16.3 7.8 0.057 13.7 2.1 3.3 1 1 2 3 3 3 1 ABC transporter C-terminal domain BRE1 PF08647.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0091 16.0 10.0 0.03 14.4 1.9 3.4 1 1 2 3 3 3 1 BRE1 E3 ubiquitin ligase Spc7 PF08317.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.011 14.6 12.7 0.24 10.2 1.3 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein UPF0242 PF06785.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.012 15.8 9.8 0.083 13.0 1.3 2.4 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Golgin_A5 PF09787.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.012 15.1 7.3 0.025 14.1 7.0 1.6 1 1 1 2 2 2 0 Golgin subfamily A member 5 Spc42p PF11544.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.013 15.5 5.2 0.036 14.0 0.4 2.8 1 1 1 2 2 2 0 Spindle pole body component Spc42p FlaC_arch PF05377.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.015 15.6 7.4 5.1 7.6 0.1 4.4 3 2 3 6 6 4 0 Flagella accessory protein C (FlaC) Lzipper-MIP1 PF14389.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.018 15.4 9.2 0.037 14.3 0.7 3.8 1 1 3 4 4 4 0 Leucine-zipper of ternary complex factor MIP1 Filament PF00038.21 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.018 14.6 14.8 0.04 13.5 6.9 2.7 1 1 1 2 2 2 0 Intermediate filament protein APG6_N PF17675.1 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.028 15.0 15.3 0.065 13.8 5.6 2.5 1 1 2 3 3 3 0 Apg6 coiled-coil region DUF5082 PF16888.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.032 14.5 2.5 0.55 10.5 0.0 3.1 1 1 1 3 3 3 0 Domain of unknown function (DUF5082) TPD52 PF04201.15 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.033 13.8 2.0 0.54 9.8 0.1 3.0 2 1 1 3 3 2 0 Tumour protein D52 family Atg14 PF10186.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.036 13.2 7.0 0.55 9.3 0.8 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Ax_dynein_light PF10211.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.058 13.3 4.3 1.8 8.5 0.4 2.5 1 1 1 2 2 2 0 Axonemal dynein light chain DUF2968 PF11180.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.069 12.8 8.0 0.031 13.9 3.3 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF2968) Cep57_CLD_2 PF14197.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.075 13.1 1.0 0.075 13.1 1.0 4.2 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 TolA_bind_tri PF16331.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.081 13.0 10.7 1 9.5 0.7 4.2 1 1 4 5 5 5 0 TolA binding protein trimerisation DUF4407 PF14362.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.084 12.2 9.0 0.17 11.2 8.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.087 13.5 8.7 0.07 13.8 3.1 2.9 1 1 1 2 2 2 0 SlyX DivIC PF04977.15 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.1 12.4 13.2 0.4 10.5 0.1 4.0 3 2 2 5 5 4 0 Septum formation initiator DUF2730 PF10805.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.11 12.6 5.0 0.82 9.8 0.9 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF2730) DUF724 PF05266.14 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.11 12.4 3.7 4.3 7.1 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) CENP-F_leu_zip PF10473.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.12 12.4 15.0 0.59 10.2 5.4 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CEP63 PF17045.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.15 11.9 10.0 0.72 9.7 8.2 2.2 1 1 1 2 2 2 0 Centrosomal protein of 63 kDa FAM76 PF16046.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.19 11.1 5.7 0.14 11.5 3.7 1.6 1 1 1 2 2 2 0 FAM76 protein DUF4472 PF14739.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.19 12.5 6.9 0.71 10.6 1.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) Macoilin PF09726.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.26 9.8 13.2 2 6.9 3.4 2.9 1 1 1 2 2 2 0 Macoilin family DUF16 PF01519.16 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.26 11.8 7.4 4.5 7.8 2.6 2.3 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF1664 PF07889.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.27 11.3 4.1 2.4 8.2 0.5 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) BST2 PF16716.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.33 11.6 7.5 19 5.9 0.1 3.6 2 2 2 4 4 4 0 Bone marrow stromal antigen 2 bZIP_2 PF07716.15 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.34 11.0 7.8 2.6 8.2 0.1 3.5 3 0 0 3 3 3 0 Basic region leucine zipper AAA_13 PF13166.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.41 9.2 7.1 1.5 7.4 6.6 1.7 1 1 1 2 2 2 0 AAA domain PRKG1_interact PF15898.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.49 11.3 10.1 0.68 10.9 2.7 3.1 1 1 2 3 3 3 0 cGMP-dependent protein kinase interacting domain EMP24_GP25L PF01105.24 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.54 10.2 2.6 0.35 10.8 0.7 1.8 2 1 0 2 2 1 0 emp24/gp25L/p24 family/GOLD TMCO5 PF14992.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.61 9.6 10.2 0.26 10.8 5.5 2.1 1 1 1 2 2 2 0 TMCO5 family YabA PF06156.13 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.7 10.6 5.7 1.1 10.0 0.3 2.9 1 1 2 3 3 3 0 Initiation control protein YabA Rnk_N PF14760.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.71 10.4 6.4 1.2 9.7 0.5 3.4 2 1 0 2 2 2 0 Rnk N-terminus Laminin_II PF06009.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.8 9.7 9.2 0.32 11.0 2.0 2.3 1 1 0 2 2 2 0 Laminin Domain II PI3K_P85_iSH2 PF16454.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 1.1 8.8 8.4 1 8.9 1.0 2.6 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain HAUS-augmin3 PF14932.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 4 6.9 9.6 0.76 9.3 3.5 2.0 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Ead_Ea22 PF13935.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 6.2 7.5 10.1 1.1e+02 3.5 10.1 2.4 1 1 0 1 1 1 0 Ead/Ea22-like protein PAS_3 PF08447.12 NODE_33702_length_644_cov_2.683087_g26866_i0forward_frame_3 - 0.12 12.7 0.0 0.51 10.7 0.0 2.2 1 1 0 1 1 1 0 PAS fold DUF1907 PF08925.11 NODE_33701_length_644_cov_2.748768_g26865_i0forward_frame_3 - 0.09 12.2 0.5 0.12 11.8 0.5 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1907) Molydop_binding PF01568.21 NODE_33701_length_644_cov_2.748768_g26865_i0forward_frame_2 - 4.6e-19 68.5 0.0 6.1e-19 68.1 0.0 1.2 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain PBP_like_2 PF12849.7 NODE_33700_length_644_cov_3.018062_g26864_i0reverse_frame_2 - 1.8e-22 80.4 1.8 2.3e-22 80.0 1.8 1.1 1 0 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 NODE_33700_length_644_cov_3.018062_g26864_i0reverse_frame_2 - 8.1e-07 28.3 0.2 1.1e-06 27.9 0.2 1.2 1 0 0 1 1 1 1 PBP superfamily domain Peptidase_A21 PF03566.13 NODE_33700_length_644_cov_3.018062_g26864_i0reverse_frame_2 - 0.00024 19.5 1.7 0.00035 19.0 1.7 1.2 1 0 0 1 1 1 1 Peptidase family A21 DUF1870 PF08965.10 NODE_33700_length_644_cov_3.018062_g26864_i0reverse_frame_2 - 0.00048 20.1 0.7 0.00077 19.5 0.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1870) SBP_bac_11 PF13531.6 NODE_33700_length_644_cov_3.018062_g26864_i0reverse_frame_2 - 0.099 12.4 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein AKAP7_RIRII_bdg PF10470.9 NODE_33699_length_644_cov_3.459770_g26863_i0reverse_frame_3 - 0.2 11.8 1.0 0.42 10.7 0.1 1.9 2 0 0 2 2 2 0 PKA-RI-RII subunit binding domain of A-kinase anchor protein DUF3283 PF11686.8 NODE_33694_length_644_cov_60.246305_g26858_i0reverse_frame_3 - 1.5 8.8 6.6 0.29 11.0 0.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3283) DUF4535 PF15054.6 NODE_33694_length_644_cov_60.246305_g26858_i0reverse_frame_3 - 3.3 7.5 5.4 1.6 8.5 0.1 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4535) C1_2 PF03107.16 NODE_33681_length_644_cov_114.878489_g26845_i0forward_frame_2 - 0.0084 16.4 5.7 0.0084 16.4 5.7 2.4 2 0 0 2 2 2 1 C1 domain Methyltransf_3 PF01596.17 NODE_33672_length_644_cov_195.441708_g26837_i0reverse_frame_2 - 1.4e-05 24.4 0.0 2.1e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 NODE_33672_length_644_cov_195.441708_g26837_i0reverse_frame_2 - 0.0023 18.9 0.2 0.0047 17.9 0.2 1.5 1 0 0 1 1 1 1 Methyltransferase domain Herpes_glycop_H PF02489.16 NODE_33672_length_644_cov_195.441708_g26837_i0forward_frame_2 - 0.14 10.7 0.0 0.18 10.3 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein H main domain Glyco_hydro_8 PF01270.17 NODE_33667_length_644_cov_575.853859_g26832_i0reverse_frame_3 - 0.055 12.3 0.0 0.07 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 8 Dynein_light PF01221.18 NODE_33667_length_644_cov_575.853859_g26832_i0forward_frame_3 - 3.3e-24 85.0 0.6 5.7e-24 84.2 0.6 1.4 1 0 0 1 1 1 1 Dynein light chain type 1 COX8 PF02285.15 NODE_33665_length_644_cov_728.334975_g26830_i0forward_frame_3 - 0.9 9.5 42.3 5.9 6.8 0.4 9.0 5 2 2 8 8 8 0 Cytochrome oxidase c subunit VIII DUF3340 PF11818.8 NODE_33655_length_645_cov_3.075410_g26821_i0reverse_frame_2 - 6.2e-41 140.1 5.4 7.8e-41 139.8 5.4 1.1 1 0 0 1 1 1 1 C-terminal domain of tail specific protease (DUF3340) Peptidase_S41 PF03572.18 NODE_33655_length_645_cov_3.075410_g26821_i0reverse_frame_2 - 4.6e-13 49.1 0.3 8.5e-13 48.2 0.1 1.6 2 0 0 2 2 2 1 Peptidase family S41 COG5 PF10392.9 NODE_33648_length_645_cov_53.360656_g26814_i0forward_frame_3 - 0.0072 16.5 1.1 0.087 13.0 1.5 2.1 1 1 1 2 2 2 1 Golgi transport complex subunit 5 Spc7 PF08317.11 NODE_33648_length_645_cov_53.360656_g26814_i0forward_frame_3 - 0.025 13.4 5.8 0.035 13.0 5.8 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 NODE_33648_length_645_cov_53.360656_g26814_i0forward_frame_3 - 0.5 9.9 4.6 0.54 9.8 4.6 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF848 PF05852.11 NODE_33633_length_645_cov_155.090164_g24257_i1forward_frame_3 - 0.0021 18.2 6.8 0.27 11.4 3.9 2.7 1 1 1 2 2 2 2 Gammaherpesvirus protein of unknown function (DUF848) Nudix_N PF12535.8 NODE_33633_length_645_cov_155.090164_g24257_i1forward_frame_3 - 0.13 11.9 0.4 0.39 10.3 0.1 1.9 2 0 0 2 2 2 0 Hydrolase of X-linked nucleoside diphosphate N terminal RFX5_DNA_bdg PF14621.6 NODE_33623_length_645_cov_238.693443_g26791_i0reverse_frame_3 - 0.006 16.4 1.6 0.01 15.6 1.4 1.4 1 1 0 1 1 1 1 RFX5 DNA-binding domain TFIIA_gamma_N PF02268.16 NODE_33613_length_645_cov_1367.760656_g26782_i0forward_frame_3 - 1.4e-07 31.4 0.0 2.8e-07 30.4 0.0 1.5 1 0 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit, helical domain VWA PF00092.28 ORF99754 - 4.4e-05 23.8 0.8 0.0001 22.6 0.5 1.8 1 1 1 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF99754 - 0.00065 20.3 0.0 0.0012 19.4 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain Ras PF00071.22 ORF99134 - 7.6e-58 194.7 1.0 9.8e-58 194.3 1.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF99134 - 9.5e-35 119.4 0.4 2e-34 118.4 0.4 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF99134 - 3.1e-22 78.8 0.2 4.4e-22 78.4 0.2 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF99134 - 2.7e-09 37.1 0.1 4.5e-09 36.4 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF99134 - 3.3e-08 33.3 0.8 7.5e-08 32.1 0.3 1.8 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF99134 - 3.5e-08 33.1 0.2 4.4e-08 32.8 0.2 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region FeoB_N PF02421.18 ORF99134 - 3.2e-07 30.0 0.1 0.0029 17.2 0.0 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B SRPRB PF09439.10 ORF99134 - 7e-07 28.9 0.1 1.1e-06 28.2 0.1 1.3 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 ORF99134 - 2.7e-06 27.4 1.5 0.0017 18.3 0.1 2.3 1 1 0 2 2 2 2 RsgA GTPase MMR_HSR1_Xtn PF16897.5 ORF99134 - 0.0013 18.7 1.0 0.0022 18.0 0.6 1.6 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain TniB PF05621.11 ORF99134 - 0.018 14.5 0.0 0.036 13.5 0.0 1.5 2 0 0 2 2 2 0 Bacterial TniB protein Dynamin_N PF00350.23 ORF99134 - 0.03 14.4 1.8 4.3 7.4 0.5 2.4 1 1 1 2 2 2 0 Dynamin family SNF2_N PF00176.23 ORF99134 - 0.037 12.7 0.0 0.046 12.4 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain zf-PARP PF00645.18 ORF98355 - 3e-10 40.8 0.8 1.2e-07 32.4 0.2 2.6 1 1 1 2 2 2 2 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region BPD_transp_1 PF00528.22 ORF97348 - 2.1e-18 66.7 18.6 2.1e-18 66.7 18.6 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CSD PF00313.22 ORF95650 - 0.00071 19.4 0.0 0.0026 17.6 0.0 2.0 2 0 0 2 2 2 1 'Cold-shock' DNA-binding domain Dicer_dimer PF03368.14 ORF95650 - 0.0032 17.6 0.0 0.0052 16.9 0.0 1.3 1 0 0 1 1 1 1 Dicer dimerisation domain dsrm PF00035.26 ORF95650 - 0.018 15.8 0.1 0.029 15.1 0.1 1.4 1 0 0 1 1 1 0 Double-stranded RNA binding motif GST_C PF00043.25 ORF94328 - 1.6e-09 37.8 0.1 3e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF94328 - 1.3e-08 35.2 0.0 2.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF94328 - 5e-08 33.2 0.0 8.5e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF94328 - 7.3e-07 29.3 0.1 1.8e-06 28.1 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF94328 - 0.00037 20.5 0.0 0.0007 19.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF94328 - 0.16 12.3 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Pkinase_Tyr PF07714.17 ORF93588 - 2.3e-51 174.6 0.0 2.5e-51 174.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF93588 - 3.5e-45 154.4 0.0 4.2e-45 154.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Haspin_kinase PF12330.8 ORF93588 - 0.025 13.6 0.0 0.031 13.2 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF93588 - 0.031 13.1 0.0 0.041 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Chordopox_A13L PF05961.11 ORF92566 - 0.031 14.5 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF92566 - 0.034 13.8 0.0 0.094 12.4 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF92566 - 0.09 13.3 0.0 0.19 12.3 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF92566 - 0.11 12.9 1.7 0.43 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF92566 - 0.15 12.1 6.5 0.23 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator Elongin_A PF06881.11 ORF91622 - 0.053 14.1 0.1 0.1 13.1 0.1 1.5 1 0 0 1 1 1 0 RNA polymerase II transcription factor SIII (Elongin) subunit A IL10 PF00726.17 ORF90094 - 0.025 14.1 0.0 0.04 13.4 0.0 1.4 1 1 0 1 1 1 0 Interleukin 10 AP2 PF00847.20 ORF86283 - 6e-06 26.4 3.7 6e-06 26.4 3.7 1.8 2 0 0 2 2 2 1 AP2 domain FAM181 PF15238.6 ORF86283 - 0.08 12.8 6.0 0.13 12.1 6.0 1.2 1 0 0 1 1 1 0 FAM181 DUF3796 PF12676.7 ORF85941 - 0.082 13.4 1.1 0.082 13.4 1.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3796) DUF4577 PF15145.6 ORF85941 - 1.7 8.7 5.2 0.37 10.8 0.2 2.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4577) WES_acyltransf PF03007.16 ORF84802 - 5.2e-11 42.8 0.0 8.8e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain NIF3 PF01784.18 ORF84802 - 0.11 12.1 0.0 7 6.2 0.0 2.1 1 1 1 2 2 2 0 NIF3 (NGG1p interacting factor 3) DNA_methylase PF00145.17 ORF83741 - 4.5e-06 26.3 0.0 0.00041 19.8 0.0 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase PBS_linker_poly PF00427.21 ORF83741 - 0.0052 16.8 0.0 0.017 15.1 0.0 1.7 2 0 0 2 2 2 1 Phycobilisome Linker polypeptide PSD2 PF07624.11 ORF83741 - 0.038 13.7 0.2 0.061 13.1 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1585) DUF4327 PF14217.6 ORF83741 - 0.16 12.1 0.0 0.29 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4327) Spc7 PF08317.11 ORF82865 - 0.0034 16.3 33.6 0.013 14.4 14.6 2.7 1 1 2 3 3 3 2 Spc7 kinetochore protein Sec8_exocyst PF04048.14 ORF82865 - 0.035 14.0 18.2 0.26 11.2 2.2 3.3 2 1 0 3 3 3 0 Sec8 exocyst complex component specific domain GAS PF13851.6 ORF82865 - 0.1 12.0 33.1 0.85 8.9 14.0 2.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF745 PF05335.13 ORF82865 - 0.22 11.2 30.1 4 7.1 10.7 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Laminin_I PF06008.14 ORF82865 - 0.29 10.8 21.9 0.83 9.3 22.0 1.7 1 1 0 1 1 1 0 Laminin Domain I SlyX PF04102.12 ORF82865 - 0.43 11.2 11.5 1.4 9.6 1.9 3.8 3 2 0 3 3 3 0 SlyX TPR_MLP1_2 PF07926.12 ORF82865 - 0.84 9.7 34.7 0.83 9.7 16.9 3.1 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Laminin_II PF06009.12 ORF82865 - 0.9 9.5 20.3 4.1 7.4 4.1 2.9 1 1 2 3 3 3 0 Laminin Domain II HTH_19 PF12844.7 ORF82865 - 1.1 9.3 6.9 1.4 9.0 0.3 3.1 3 1 0 3 3 3 0 Helix-turn-helix domain DUF1664 PF07889.12 ORF82865 - 1.2 9.1 15.5 3.7 7.6 1.2 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Uds1 PF15456.6 ORF82865 - 1.5 9.0 28.3 0.59 10.3 20.4 2.4 1 1 1 2 2 2 0 Up-regulated During Septation USP8_interact PF08941.10 ORF82865 - 1.5 8.6 15.1 0.6 9.9 2.8 2.6 2 1 1 3 3 3 0 USP8 interacting SH3BP5 PF05276.14 ORF82865 - 1.9 8.2 26.5 0.56 10.0 11.6 2.3 1 1 1 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) She9_MDM33 PF05546.11 ORF82865 - 1.9 8.3 21.2 4.9 6.9 3.2 3.0 1 1 1 2 2 2 0 She9 / Mdm33 family DUF5082 PF16888.5 ORF82865 - 2.2 8.6 22.5 0.39 11.0 0.3 3.5 2 1 2 4 4 4 0 Domain of unknown function (DUF5082) UPF0242 PF06785.11 ORF82865 - 2.5 8.1 26.8 2.7 8.0 11.0 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF812 PF05667.11 ORF82865 - 2.7 6.8 29.3 0.51 9.2 7.1 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF812) CALCOCO1 PF07888.11 ORF82865 - 2.9 6.7 27.5 3.8 6.3 27.5 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like TMF_DNA_bd PF12329.8 ORF82865 - 3.5 7.7 31.8 0.56 10.2 6.8 3.5 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 ORF82865 - 4 7.8 5.8 7.2 6.9 0.6 3.1 2 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) MscS_porin PF12795.7 ORF82865 - 4 6.9 27.5 21 4.6 8.7 3.0 1 1 2 3 3 3 0 Mechanosensitive ion channel porin domain OmpH PF03938.14 ORF82865 - 4.7 7.6 38.7 0.33 11.3 16.9 2.8 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) ATG16 PF08614.11 ORF82865 - 4.7 7.4 29.7 8.4 6.6 8.1 2.3 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Phage_GP20 PF06810.11 ORF82865 - 5.1 6.9 31.3 17 5.2 14.7 2.7 1 1 1 2 2 2 0 Phage minor structural protein GP20 Seryl_tRNA_N PF02403.22 ORF82865 - 6.5 7.0 37.8 0.23 11.7 6.6 3.9 1 1 3 4 4 4 0 Seryl-tRNA synthetase N-terminal domain BLOC1S3 PF15753.5 ORF82865 - 6.7 6.8 14.0 2.6 8.1 5.1 2.8 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 Fib_alpha PF08702.10 ORF82865 - 8.2 6.6 16.7 1.2 9.3 8.8 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family APG6_N PF17675.1 ORF82865 - 8.9 6.8 35.0 1.1 9.8 10.9 3.0 1 1 2 3 3 3 0 Apg6 coiled-coil region DUF3584 PF12128.8 ORF82865 - 9.2 3.6 30.6 10 3.5 12.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) GCD14 PF08704.10 ORF82865 - 9.3 5.8 8.7 0.48 10.1 0.6 2.1 1 1 1 2 2 2 0 tRNA methyltransferase complex GCD14 subunit YscO PF07321.12 ORF82865 - 9.6 6.2 38.3 0.77 9.7 6.0 3.1 1 1 1 3 3 3 0 Type III secretion protein YscO Pepsin-I3 PF06394.13 ORF81124 - 0.0046 17.1 1.8 0.041 14.1 0.3 2.4 2 0 0 2 2 2 1 Pepsin inhibitor-3-like repeated domain Tae4 PF14113.6 ORF81124 - 0.17 12.1 2.2 1.6 9.0 0.0 2.2 2 0 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 HalX PF08663.10 ORF81124 - 0.22 11.8 5.1 0.38 11.1 0.3 3.3 2 2 2 4 4 4 0 HalX domain RadC PF04002.15 ORF80309 - 1.6e-43 147.6 0.0 2.1e-43 147.1 0.0 1.2 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.6 ORF80309 - 0.0061 16.3 0.0 0.0084 15.9 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain HHH_2 PF12826.7 ORF80309 - 0.028 14.5 0.0 0.056 13.6 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif Chordopox_A13L PF05961.11 ORF79139 - 0.031 14.5 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF79139 - 0.034 13.8 0.0 0.094 12.4 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF79139 - 0.09 13.3 0.0 0.19 12.3 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF79139 - 0.11 12.9 1.7 0.43 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF79139 - 0.15 12.1 6.5 0.23 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator Thioredoxin PF00085.20 ORF77760 - 3e-16 59.3 0.0 4.5e-16 58.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin PAPS_reduct PF01507.19 ORF77760 - 6.2e-15 55.7 0.0 9.7e-15 55.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Thioredoxin_4 PF13462.6 ORF77760 - 0.0027 17.9 0.0 0.0055 16.9 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin TraF PF13728.6 ORF77760 - 0.0072 16.2 0.0 0.0097 15.7 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF77760 - 0.2 12.0 0.0 25 5.3 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin-like Dynein_attach_N PF15867.5 ORF76353 - 0.094 12.7 0.5 0.27 11.2 0.5 1.8 1 0 0 1 1 1 0 Dynein attachment factor N-terminus SF-assemblin PF06705.11 ORF76353 - 0.31 10.3 9.1 4.1 6.7 2.0 2.9 2 1 0 2 2 2 0 SF-assemblin/beta giardin betaPIX_CC PF16523.5 ORF76353 - 0.44 10.4 10.4 0.14 12.0 2.6 2.9 2 1 1 3 3 3 0 betaPIX coiled coil Exonuc_VII_L PF02601.15 ORF76353 - 0.72 9.4 12.5 0.39 10.2 5.6 2.0 1 1 1 2 2 2 0 Exonuclease VII, large subunit TraY PF05509.11 ORF76353 - 0.96 9.5 4.9 54 3.9 0.1 4.0 4 0 0 4 4 4 0 TraY domain Phage_Mu_Gam PF07352.12 ORF76353 - 2 8.3 5.7 9.7 6.1 0.1 2.5 2 1 0 2 2 2 0 Bacteriophage Mu Gam like protein Vicilin_N PF04702.12 ORF76353 - 6.9 6.5 16.1 0.12 12.1 8.0 2.1 2 1 0 2 2 2 0 Vicilin N terminal region DUF3280 PF11684.8 ORF76353 - 9.8 6.6 10.0 21 5.5 3.0 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2380) HSCB_C PF07743.13 ORF76238 - 0.51 10.9 4.1 2 9.0 0.3 2.4 2 0 0 2 2 2 0 HSCB C-terminal oligomerisation domain TTL PF03133.15 ORF76187 - 5.7e-24 84.8 0.0 7.3e-24 84.4 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF76187 - 6.6e-08 32.1 0.1 9.6e-08 31.6 0.1 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF76187 - 0.0066 15.7 0.0 0.013 14.8 0.0 1.6 1 1 0 1 1 1 1 Sugar-transfer associated ATP-grasp PLAC8 PF04749.17 ORF74963 - 2.9e-10 41.0 0.8 5.8e-10 40.0 0.8 1.5 1 0 0 1 1 1 1 PLAC8 family BCCT PF02028.17 ORF74963 - 0.047 12.1 0.4 0.047 12.1 0.4 2.1 2 0 0 2 2 2 0 BCCT, betaine/carnitine/choline family transporter DUF4812 PF16071.5 ORF74963 - 0.12 12.2 0.1 0.85 9.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4812) Pepsin-I3 PF06394.13 ORF74630 - 0.0046 17.1 1.8 0.041 14.1 0.3 2.4 2 0 0 2 2 2 1 Pepsin inhibitor-3-like repeated domain Tae4 PF14113.6 ORF74630 - 0.17 12.1 2.2 1.6 9.0 0.0 2.2 2 0 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 HalX PF08663.10 ORF74630 - 0.22 11.8 5.1 0.38 11.1 0.3 3.3 2 2 2 4 4 4 0 HalX domain adh_short PF00106.25 ORF70882 - 1.7e-20 73.3 0.7 1.9e-20 73.1 0.7 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF70882 - 6.3e-13 48.8 0.2 7.9e-13 48.5 0.2 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF5027 PF16430.5 ORF70882 - 0.003 17.4 0.1 0.004 16.9 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5027) NmrA PF05368.13 ORF70882 - 0.023 14.3 0.4 0.03 13.9 0.4 1.2 1 0 0 1 1 1 0 NmrA-like family Snf7 PF03357.21 ORF70154 - 4.7e-31 107.7 22.4 6e-31 107.4 22.4 1.1 1 0 0 1 1 1 1 Snf7 Ppx-GppA PF02541.16 ORF70154 - 0.056 12.9 1.2 0.092 12.2 0.7 1.6 1 1 0 1 1 1 0 Ppx/GppA phosphatase family Phosphatase PF15698.5 ORF70154 - 0.11 11.6 1.1 0.16 11.1 1.1 1.3 1 0 0 1 1 1 0 Phosphatase CCDC-167 PF15188.6 ORF70154 - 0.12 12.7 0.5 0.12 12.7 0.5 2.6 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 TMCCDC2 PF15844.5 ORF70154 - 0.25 11.2 3.3 0.41 10.5 3.3 1.3 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 Nup54 PF13874.6 ORF70154 - 0.36 10.9 7.1 1.7 8.8 7.1 2.1 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 Atg14 PF10186.9 ORF70154 - 0.37 9.8 5.3 0.54 9.3 5.3 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cauli_DNA-bind PF03310.13 ORF70154 - 1.6 8.8 8.6 0.94 9.6 2.9 2.2 2 0 0 2 2 2 0 Caulimovirus DNA-binding protein NPV_P10 PF05531.12 ORF70154 - 1.7 9.1 6.8 3.2 8.3 3.1 2.9 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF1987 PF09345.10 ORF70154 - 5.2 6.8 10.8 0.11 12.2 4.0 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF1987) DoxA PF07680.11 ORF69954 - 0.64 9.9 5.0 0.39 10.6 0.8 2.5 3 0 0 3 3 3 0 TQO small subunit DoxA GST_C PF00043.25 ORF6848 - 1.6e-09 37.8 0.1 3e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF6848 - 1.3e-08 35.2 0.0 2.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF6848 - 5e-08 33.2 0.0 8.5e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF6848 - 7e-07 29.4 0.1 1.8e-06 28.1 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF6848 - 0.00034 20.6 0.0 0.0007 19.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF6848 - 0.16 12.3 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Methyltransf_25 PF13649.6 ORF6705 - 1.8e-14 54.2 0.2 2.7e-14 53.6 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF6705 - 5.7e-11 42.9 0.1 8.3e-11 42.4 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF6705 - 4.1e-05 23.4 0.0 5.8e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF6705 - 5.3e-05 23.1 0.0 7.6e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF6705 - 0.00025 21.8 0.0 0.0005 20.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF6705 - 0.0019 17.8 0.0 0.0029 17.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.19 ORF6705 - 0.025 14.7 0.0 0.043 13.9 0.0 1.6 1 1 0 1 1 1 0 FtsJ-like methyltransferase p450 PF00067.22 ORF64273 - 1.2e-39 136.3 0.0 1.4e-39 136.1 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 CheZ PF04344.13 ORF63293 - 6.4e-77 258.1 5.3 7.2e-77 257.9 5.3 1.0 1 0 0 1 1 1 1 Chemotaxis phosphatase, CheZ Pepsin-I3 PF06394.13 ORF63157 - 0.0046 17.1 1.8 0.041 14.1 0.3 2.4 2 0 0 2 2 2 1 Pepsin inhibitor-3-like repeated domain Tae4 PF14113.6 ORF63157 - 0.17 12.1 2.2 1.6 9.0 0.0 2.2 2 0 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 HalX PF08663.10 ORF63157 - 0.22 11.8 5.1 0.38 11.1 0.3 3.3 2 2 2 4 4 4 0 HalX domain HECT PF00632.25 ORF6298 - 4.9e-15 55.8 0.0 6.1e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Phage_ABA_S PF18066.1 ORF6298 - 0.16 12.7 3.2 1.9 9.2 0.5 2.3 2 0 0 2 2 2 0 Phage ABA sandwich domain WES_acyltransf PF03007.16 ORF62015 - 5.2e-11 42.8 0.0 8.8e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain NIF3 PF01784.18 ORF62015 - 0.11 12.1 0.0 7 6.2 0.0 2.1 1 1 1 2 2 2 0 NIF3 (NGG1p interacting factor 3) GHMP_kinases_N PF00288.26 ORF61845 - 0.068 13.4 0.1 6.5 7.1 0.0 2.4 2 0 0 2 2 2 0 GHMP kinases N terminal domain CBM_48 PF02922.18 ORF61711 - 9.5e-15 54.7 1.0 2.6e-14 53.3 0.6 2.0 1 1 1 2 2 2 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMPK1_CBM PF16561.5 ORF61711 - 0.00031 20.9 0.8 0.0029 17.8 0.5 2.5 1 1 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase SNCAIP_SNCA_bd PF16700.5 ORF60832 - 1.6 8.5 3.8 1.5 8.6 2.0 1.8 2 0 0 2 2 2 0 Synphilin-1 alpha-Synuclein-binding domain OrsD PF12013.8 ORF58189 - 2.2 8.7 6.0 0.27 11.7 1.1 2.0 2 1 0 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D Thioredoxin PF00085.20 ORF57248 - 1.8e-25 88.9 0.0 2.7e-25 88.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF57248 - 0.0001 22.7 0.0 0.00079 19.9 0.0 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain HyaE PF07449.11 ORF57248 - 0.00018 21.4 0.0 0.00038 20.4 0.0 1.5 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_7 PF13899.6 ORF57248 - 0.0013 18.9 0.0 0.0031 17.7 0.0 1.6 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.6 ORF57248 - 0.0013 19.0 0.0 0.019 15.3 0.0 2.3 1 1 1 2 2 2 1 Thioredoxin-like TraF PF13728.6 ORF57248 - 0.0047 16.8 0.0 0.0066 16.3 0.0 1.3 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_9 PF14595.6 ORF57248 - 0.0059 16.4 0.0 0.0097 15.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_6 PF13848.6 ORF57248 - 0.026 14.4 0.0 1.5 8.7 0.0 2.2 2 0 0 2 2 2 0 Thioredoxin-like domain AhpC-TSA PF00578.21 ORF57248 - 0.035 14.0 0.0 0.16 11.9 0.0 1.9 1 1 1 2 2 2 0 AhpC/TSA family Arrestin_N PF00339.29 ORF55044 - 1.2e-05 25.4 0.1 2.6e-05 24.3 0.1 1.6 1 1 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain DUF432 PF04254.13 ORF55044 - 0.14 12.3 0.1 0.33 11.1 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF432) Rgp1 PF08737.10 ORF55044 - 0.33 10.1 4.6 1.7 7.7 1.7 2.1 1 1 1 2 2 2 0 Rgp1 Na_Ca_ex PF01699.24 ORF54893 - 5.4e-25 88.1 13.8 7.1e-25 87.7 13.8 1.1 1 0 0 1 1 1 1 Sodium/calcium exchanger protein 2TM PF13239.6 ORF54893 - 0.033 14.5 4.0 0.033 14.5 4.0 2.4 2 0 0 2 2 2 0 2TM domain TIC20 PF16166.5 ORF54893 - 0.081 12.7 3.9 0.12 12.2 0.5 2.0 2 0 0 2 2 2 0 Chloroplast import apparatus Tic20-like Epiglycanin_C PF14654.6 ORF54893 - 0.21 11.6 1.4 0.25 11.4 0.2 1.9 2 0 0 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region HECT PF00632.25 ORF53424 - 3.9e-16 59.4 0.0 4.8e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Pox_Ag35 PF03286.14 ORF53424 - 0.092 12.5 2.4 0.13 12.0 2.4 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein AsnC_trans_reg2 PF17805.1 ORF53424 - 0.15 12.2 0.3 0.28 11.4 0.1 1.5 2 0 0 2 2 2 0 AsnC-like ligand binding domain DUF3395 PF11875.8 ORF52135 - 1.5e-26 93.1 0.0 2e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3395) Thioredoxin PF00085.20 ORF51751 - 1.8e-25 88.9 0.0 2.7e-25 88.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF51751 - 0.0001 22.7 0.0 0.00079 19.9 0.0 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain HyaE PF07449.11 ORF51751 - 0.00018 21.4 0.0 0.00038 20.4 0.0 1.4 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_7 PF13899.6 ORF51751 - 0.0012 18.9 0.0 0.0031 17.7 0.0 1.6 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.6 ORF51751 - 0.0013 19.0 0.0 0.019 15.3 0.0 2.3 1 1 1 2 2 2 1 Thioredoxin-like TraF PF13728.6 ORF51751 - 0.0047 16.8 0.0 0.0066 16.3 0.0 1.3 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_9 PF14595.6 ORF51751 - 0.0059 16.4 0.0 0.0097 15.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_6 PF13848.6 ORF51751 - 0.029 14.3 0.0 1.5 8.7 0.0 2.2 2 0 0 2 2 2 0 Thioredoxin-like domain AhpC-TSA PF00578.21 ORF51751 - 0.036 14.0 0.0 0.16 11.9 0.0 1.9 1 1 1 2 2 2 0 AhpC/TSA family PRMT5_C PF17286.2 ORF45413 - 3.2e-44 150.9 0.0 4e-44 150.6 0.0 1.0 1 0 0 1 1 1 1 PRMT5 oligomerisation domain PRMT5 PF05185.16 ORF45413 - 5.6e-18 65.4 0.0 7.4e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase PPARgamma_N PF12577.8 ORF449 - 0.073 13.7 0.2 0.17 12.6 0.2 1.6 1 0 0 1 1 1 0 PPAR gamma N-terminal region WGG PF10273.9 ORF43755 - 3e-18 66.2 0.0 6e-18 65.3 0.0 1.5 1 0 0 1 1 1 1 Pre-rRNA-processing protein TSR2 GvpG PF05120.12 ORF43755 - 0.045 13.8 0.6 0.093 12.7 0.6 1.6 1 0 0 1 1 1 0 Gas vesicle protein G RRP7 PF12923.7 ORF43755 - 0.082 13.0 0.6 0.15 12.2 0.1 1.8 1 1 1 2 2 2 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain Peptidase_M74 PF03411.13 ORF4158 - 7.3e-82 274.5 0.0 8.1e-82 274.4 0.0 1.0 1 0 0 1 1 1 1 Penicillin-insensitive murein endopeptidase Chordopox_A13L PF05961.11 ORF39603 - 0.031 14.5 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF39603 - 0.034 13.8 0.0 0.094 12.4 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF39603 - 0.09 13.3 0.0 0.19 12.3 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF39603 - 0.11 12.9 1.7 0.43 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF39603 - 0.15 12.1 6.5 0.23 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator KGK PF08872.10 ORF39522 - 0.025 15.1 0.2 0.21 12.1 0.0 2.3 2 0 0 2 2 2 0 KGK domain p450 PF00067.22 ORF39314 - 6.5e-39 133.9 0.0 7.4e-39 133.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF4600 PF15372.6 ORF38478 - 0.00025 21.5 1.3 0.015 15.7 0.2 2.8 1 1 2 3 3 3 1 Domain of unknown function (DUF4600) I-EGF_1 PF18372.1 ORF38478 - 0.037 14.1 0.4 8.3 6.6 0.0 2.5 2 0 0 2 2 2 0 Integrin beta epidermal growth factor like domain 1 DUF2664 PF10867.8 ORF38478 - 0.16 12.5 2.6 17 6.0 0.1 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF2664) CP12 PF02672.15 ORF38478 - 0.46 11.3 2.0 6.1 7.7 0.0 2.8 2 1 1 3 3 3 0 CP12 domain WES_acyltransf PF03007.16 ORF37747 - 5.2e-11 42.8 0.0 8.8e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain NIF3 PF01784.18 ORF37747 - 0.11 12.1 0.0 7 6.2 0.0 2.1 1 1 1 2 2 2 0 NIF3 (NGG1p interacting factor 3) p450 PF00067.22 ORF37693 - 2e-38 132.4 0.0 2.3e-38 132.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 NAD_binding_10 PF13460.6 ORF37693 - 0.11 12.4 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding LEAP-2 PF07359.11 ORF36886 - 3.9 7.4 12.5 0.36 10.7 0.7 2.9 3 0 0 3 3 3 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) ANAPC4_WD40 PF12894.7 ORF36517 - 1.2e-05 25.6 0.2 8.1e-05 22.8 0.0 2.2 2 1 1 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF36517 - 0.0071 17.2 9.8 0.18 12.7 0.2 3.4 4 0 0 4 4 4 2 WD domain, G-beta repeat EF-hand_4 PF12763.7 ORF36039 - 0.015 15.3 0.2 0.034 14.1 0.2 1.7 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EF-hand_1 PF00036.32 ORF36039 - 0.038 13.6 1.4 0.49 10.1 0.3 3.0 2 0 0 2 2 2 0 EF hand EF-hand_7 PF13499.6 ORF36039 - 0.56 10.7 7.3 9.3 6.8 7.3 2.7 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF36039 - 2.6 8.2 5.9 0.62 10.2 0.4 2.9 4 0 0 4 4 4 0 EF-hand domain GST_C PF00043.25 ORF34719 - 1.2e-08 35.0 0.2 3.1e-08 33.7 0.1 1.7 1 1 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF34719 - 2.6e-07 30.6 0.1 4.4e-07 29.8 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF34719 - 1.6e-06 28.4 0.0 6.6e-06 26.5 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF34719 - 5.3e-06 26.5 0.1 1e-05 25.7 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF34719 - 2.6e-05 24.5 0.0 4.5e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain CLAG PF03805.13 ORF34719 - 0.011 13.4 0.0 0.013 13.1 0.0 1.0 1 0 0 1 1 1 0 Cytoadherence-linked asexual protein GST_N_2 PF13409.6 ORF34719 - 0.087 13.1 0.0 0.16 12.3 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain UPF0227 PF05728.12 ORF3287 - 2.5e-07 30.8 0.1 0.00092 19.2 0.0 2.7 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0227) Abhydrolase_6 PF12697.7 ORF3287 - 8e-05 23.3 2.1 0.024 15.2 0.7 2.2 1 1 1 2 2 2 2 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF3287 - 0.0022 17.3 0.8 0.21 10.8 0.3 2.2 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF3287 - 0.077 12.5 0.5 1 8.8 0.5 2.2 1 1 0 1 1 1 0 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF3287 - 0.16 11.6 0.0 2.7 7.6 0.0 2.1 2 0 0 2 2 2 0 alpha/beta hydrolase fold Chordopox_A13L PF05961.11 ORF32794 - 0.031 14.5 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF32794 - 0.034 13.8 0.0 0.094 12.4 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF32794 - 0.09 13.3 0.0 0.19 12.3 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF32794 - 0.11 12.9 1.7 0.43 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF32794 - 0.15 12.1 6.5 0.23 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator GST_C PF00043.25 ORF31332 - 3.3e-09 36.9 0.1 6e-09 36.0 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF31332 - 3.4e-08 33.8 0.0 6.6e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF31332 - 4.9e-07 29.9 0.1 1.3e-06 28.6 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF31332 - 7.1e-07 29.5 0.0 1.2e-06 28.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF31332 - 0.00072 19.5 0.0 0.0017 18.3 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin2_C PF04399.13 ORF31332 - 0.12 12.2 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain Pepsin-I3 PF06394.13 ORF30254 - 0.0046 17.1 1.8 0.041 14.1 0.3 2.4 2 0 0 2 2 2 1 Pepsin inhibitor-3-like repeated domain Tae4 PF14113.6 ORF30254 - 0.17 12.1 2.2 1.6 9.0 0.0 2.2 2 0 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 HalX PF08663.10 ORF30254 - 0.22 11.8 5.1 0.38 11.1 0.3 3.3 2 2 2 4 4 4 0 HalX domain CLAMP PF14769.6 ORF29667 - 7.2e-16 58.4 0.0 1.1e-15 57.9 0.0 1.3 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 Elongin_A PF06881.11 ORF28484 - 0.053 14.1 0.1 0.1 13.1 0.1 1.5 1 0 0 1 1 1 0 RNA polymerase II transcription factor SIII (Elongin) subunit A DUF5518 PF17647.1 ORF28227 - 0.054 13.6 6.9 2 8.6 6.9 2.2 1 1 0 1 1 1 0 Family of unknown function (DUF5518) VSP PF03302.13 ORF28227 - 0.34 9.7 10.2 0.012 14.5 3.1 1.9 1 1 1 2 2 2 0 Giardia variant-specific surface protein Antimicrobial12 PF08107.11 ORF27278 - 0.069 12.9 0.4 0.11 12.2 0.4 1.3 1 0 0 1 1 1 0 Pleurocidin family p450 PF00067.22 ORF26140 - 2e-39 135.7 0.0 2.3e-39 135.5 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Actin PF00022.19 ORF26140 - 0.12 10.9 0.0 0.14 10.7 0.0 1.1 1 0 0 1 1 1 0 Actin MtrA PF04208.14 ORF26140 - 0.16 11.6 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit A CUE PF02845.16 ORF25624 - 8.5e-13 47.7 0.2 1.7e-12 46.8 0.2 1.5 1 0 0 1 1 1 1 CUE domain PAXIP1_C PF15364.6 ORF25624 - 0.56 10.5 9.7 0.62 10.4 8.4 1.7 1 1 0 1 1 1 0 PAXIP1-associated-protein-1 C term PTIP binding protein GET2 PF08690.10 ORF25624 - 3 7.4 14.6 3.9 7.1 14.6 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 Glyco_transf_15 PF01793.16 ORF25601 - 1.3e-15 57.5 0.0 1.9e-15 57.0 0.0 1.1 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase RNA_pol_Rpb6 PF01192.22 ORF25601 - 0.18 11.7 0.6 0.3 11.0 0.0 1.6 2 0 0 2 2 2 0 RNA polymerase Rpb6 NAD_binding_1 PF00175.21 ORF25368 - 6.5e-24 84.7 0.0 1.4e-23 83.6 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF25368 - 4.1e-14 52.7 0.0 6.4e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF25368 - 2.4e-06 27.8 0.0 2.3e-05 24.6 0.0 2.0 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF25368 - 0.098 13.1 0.2 0.16 12.4 0.2 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC GST_C_6 PF17171.4 ORF24537 - 0.00014 21.6 0.1 0.084 12.7 0.0 2.4 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain ABC_tran PF00005.27 ORF23021 - 1.3e-15 58.1 0.0 1.9e-15 57.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF23021 - 6.9e-09 35.9 0.0 8.5e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 ORF23021 - 0.0075 16.0 0.0 0.013 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 ORF23021 - 0.029 13.8 0.0 0.036 13.5 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF23021 - 0.082 13.2 0.0 0.36 11.1 0.0 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Chordopox_A13L PF05961.11 ORF22448 - 0.031 14.5 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF22448 - 0.034 13.8 0.0 0.094 12.4 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF22448 - 0.09 13.3 0.0 0.19 12.3 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF22448 - 0.11 12.9 1.7 0.43 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF22448 - 0.15 12.1 6.5 0.23 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator NAD_binding_1 PF00175.21 ORF22388 - 6.5e-24 84.7 0.0 1.4e-23 83.6 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF22388 - 4.1e-14 52.7 0.0 6.4e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF22388 - 2.4e-06 27.8 0.0 2.3e-05 24.6 0.0 2.0 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF22388 - 0.098 13.1 0.2 0.16 12.4 0.2 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC 3Beta_HSD PF01073.19 ORF22341 - 6.7e-16 58.1 0.0 7.9e-16 57.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF22341 - 1.2e-11 44.6 0.1 2.6e-11 43.5 0.1 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF22341 - 3.1e-05 23.3 0.0 3.8e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF22341 - 3.4e-05 23.1 0.2 0.00031 20.0 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF22341 - 0.00023 21.1 0.0 0.00083 19.3 0.0 1.7 2 0 0 2 2 2 1 NAD(P)H-binding Chordopox_A13L PF05961.11 ORF22274 - 0.031 14.5 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF22274 - 0.034 13.8 0.0 0.094 12.4 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF22274 - 0.09 13.3 0.0 0.19 12.3 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF22274 - 0.11 12.9 1.7 0.43 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF22274 - 0.15 12.1 6.5 0.23 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator Desulfoferrod_N PF06397.12 ORF21244 - 0.077 12.6 0.9 0.15 11.7 0.9 1.4 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain LicD PF04991.13 ORF20950 - 3.5e-06 27.3 0.0 5.7e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 LicD family Oxysterol_BP PF01237.18 ORF1878 - 6.8e-47 160.1 5.1 1e-46 159.5 5.1 1.2 1 0 0 1 1 1 1 Oxysterol-binding protein UDP-g_GGTase PF06427.11 ORF1878 - 0.048 13.8 0.0 0.089 12.9 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose:Glycoprotein Glucosyltransferase Cupin_7 PF12973.7 ORF1878 - 0.15 12.0 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 ChrR Cupin-like domain 5_3_exonuc PF01367.20 ORF18112 - 2.9e-26 91.9 0.0 4.2e-26 91.4 0.0 1.2 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold 5_3_exonuc_N PF02739.16 ORF18112 - 1.6e-25 89.9 0.0 2.2e-25 89.4 0.0 1.2 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain CBM_48 PF02922.18 ORF15868 - 9.5e-15 54.7 1.0 2.6e-14 53.3 0.6 2.0 1 1 1 2 2 2 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMPK1_CBM PF16561.5 ORF15868 - 0.00031 20.9 0.8 0.0029 17.8 0.5 2.5 1 1 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase p450 PF00067.22 ORF14637 - 4.4e-38 131.2 0.0 5.2e-38 131.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 CUE PF02845.16 ORF14229 - 8.4e-13 47.8 0.2 1.7e-12 46.8 0.2 1.5 1 0 0 1 1 1 1 CUE domain PAXIP1_C PF15364.6 ORF14229 - 0.54 10.6 9.7 0.47 10.8 8.0 1.7 1 1 0 1 1 1 0 PAXIP1-associated-protein-1 C term PTIP binding protein GET2 PF08690.10 ORF14229 - 3.1 7.4 14.6 4 7.0 14.6 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 Ribosomal_L1 PF00687.21 ORF13042 - 5.5e-40 137.3 4.1 6.8e-40 137.0 4.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Helicase_C PF00271.31 ORF13042 - 0.068 13.5 0.0 0.19 12.0 0.0 1.8 1 1 0 1 1 1 0 Helicase conserved C-terminal domain GST_C_4 PF14834.6 ORF12974 - 2.9e-71 237.3 0.3 3.8e-71 236.9 0.3 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF12974 - 3.7e-12 46.4 0.0 5.8e-12 45.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF12974 - 7.1e-12 45.6 0.0 1.2e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF12974 - 1.9e-08 34.5 0.0 2.8e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF12974 - 0.0015 19.2 0.0 0.024 15.4 0.0 2.2 2 0 0 2 2 2 1 Glutathione S-transferase N-terminal domain Pkinase PF00069.25 ORF12089 - 6e-36 124.2 0.2 2.3e-20 73.1 0.1 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF12089 - 2.4e-15 56.6 0.1 4.9e-09 35.8 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF12089 - 5.8e-11 42.2 0.2 3e-06 26.8 0.0 2.1 2 0 0 2 2 2 2 Kinase-like APH PF01636.23 ORF12089 - 0.00014 21.9 0.0 0.00021 21.3 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF12089 - 0.0099 14.7 0.0 0.012 14.4 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF12089 - 0.02 14.5 0.0 0.031 13.9 0.0 1.3 1 0 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF12089 - 0.023 14.1 0.0 0.028 13.8 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF12089 - 0.22 10.4 0.0 0.4 9.6 0.0 1.4 1 0 0 1 1 1 0 Haspin like kinase domain Ribosomal_L32p PF01783.23 ORF11788 - 0.39 11.0 10.2 0.48 10.7 7.9 2.1 2 0 0 2 2 2 0 Ribosomal L32p protein family DUF1133 PF06576.11 ORF107175 - 0.017 14.5 0.1 0.024 14.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1133) NAD_binding_1 PF00175.21 ORF106663 - 6.5e-24 84.7 0.0 1.4e-23 83.6 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF106663 - 4.1e-14 52.7 0.0 6.4e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF106663 - 2.4e-06 27.8 0.0 2.3e-05 24.6 0.0 2.0 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF106663 - 0.098 13.1 0.2 0.16 12.4 0.2 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Chordopox_A13L PF05961.11 ORF10622 - 0.031 14.5 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF10622 - 0.034 13.8 0.0 0.094 12.4 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF10622 - 0.09 13.3 0.0 0.19 12.3 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF10622 - 0.11 12.9 1.7 0.43 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF10622 - 0.15 12.1 6.5 0.23 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator GST_C PF00043.25 ORF103175 - 1.6e-09 37.9 0.1 3e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF103175 - 1.3e-08 35.2 0.0 2.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF103175 - 5e-08 33.2 0.0 8.5e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF103175 - 7e-07 29.4 0.1 1.8e-06 28.1 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF103175 - 0.00034 20.6 0.0 0.0007 19.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF103175 - 0.16 12.3 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain RHH_1 PF01402.21 ORF102357 - 0.037 14.0 1.0 0.071 13.1 0.2 1.8 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family SWIB PF02201.18 ORF102357 - 0.066 13.1 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 SWIB/MDM2 domain Nop PF01798.18 NODE_34036_length_637_cov_3.941860_g27162_i0forward_frame_1 - 2.3e-14 53.4 0.0 3.5e-14 52.8 0.0 1.3 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin CD45 PF12567.8 NODE_34015_length_637_cov_155.192691_g27142_i0reverse_frame_1 - 0.075 13.0 2.1 0.16 12.0 2.1 1.5 1 0 0 1 1 1 0 Leukocyte receptor CD45 RCC1_2 PF13540.6 NODE_34011_length_637_cov_214.707641_g27140_i0forward_frame_1 - 2.1e-08 33.8 15.3 0.17 11.7 0.7 5.4 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_34011_length_637_cov_214.707641_g27140_i0forward_frame_1 - 0.00012 22.5 0.0 11 6.5 0.0 4.2 4 1 0 4 4 4 1 Spectrin repeat DUF155 PF02582.14 NODE_34011_length_637_cov_214.707641_g27140_i0forward_frame_1 - 0.0041 17.2 2.5 39 4.3 0.0 4.2 3 2 1 4 4 4 0 Uncharacterised ACR, YagE family COG1723 CAMSAP_CH PF11971.8 NODE_34011_length_637_cov_214.707641_g27140_i0forward_frame_1 - 0.043 13.7 0.2 12 5.8 0.0 3.2 3 1 0 3 3 3 0 CAMSAP CH domain DUF1024 PF06260.12 NODE_34011_length_637_cov_214.707641_g27140_i0forward_frame_1 - 0.1 12.9 0.1 5.5 7.4 0.0 2.9 2 2 1 3 3 3 0 Protein of unknown function (DUF1024) Capsule_synth PF05159.14 NODE_34011_length_637_cov_214.707641_g27140_i0forward_frame_1 - 0.14 11.6 1.0 0.88 9.0 0.1 2.4 1 1 2 3 3 3 0 Capsule polysaccharide biosynthesis protein Romo1 PF10247.9 NODE_34011_length_637_cov_214.707641_g27140_i0forward_frame_1 - 0.15 12.5 1.7 5.4 7.5 0.1 3.3 4 1 0 4 4 4 0 Reactive mitochondrial oxygen species modulator 1 Cytochrom_B559 PF00283.19 NODE_34006_length_637_cov_336.953488_g26092_i1forward_frame_1 - 0.01 15.3 0.1 0.018 14.5 0.1 1.3 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Rep_Org_C PF06926.11 NODE_34004_length_637_cov_363.101329_g27134_i0reverse_frame_1 - 0.05 13.9 2.8 0.085 13.2 0.4 2.4 1 1 1 2 2 2 0 Putative replisome organiser protein C-terminus DUF4131 PF13567.6 NODE_34004_length_637_cov_363.101329_g27134_i0forward_frame_1 - 0.052 13.2 2.6 0.072 12.7 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) MFS_1 PF07690.16 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 3.8e-24 85.3 17.5 4.4e-24 85.1 17.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 1.3e-06 27.6 3.2 1.3e-06 27.6 3.2 1.7 1 1 1 2 2 2 1 Sugar (and other) transporter Nuc_H_symport PF03825.16 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.00035 19.7 0.8 0.00047 19.3 0.8 1.2 1 0 0 1 1 1 1 Nucleoside H+ symporter MFS_1_like PF12832.7 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.00071 18.5 7.1 0.00085 18.3 7.1 1.2 1 0 0 1 1 1 1 MFS_1 like family TRI12 PF06609.13 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.013 13.9 2.6 0.02 13.3 1.7 1.6 1 1 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) MFS_4 PF06779.14 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.017 14.4 8.9 0.035 13.4 8.8 1.6 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB MFS_3 PF05977.13 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.28 9.5 7.0 0.17 10.2 5.5 1.3 1 1 0 1 1 1 0 Transmembrane secretion effector FinO_N PF12602.8 NODE_33976_length_638_cov_72.444444_g27112_i0forward_frame_1 - 0.11 12.8 0.2 0.18 12.2 0.2 1.2 1 0 0 1 1 1 0 Fertility inhibition protein N terminal CGGC PF08821.11 NODE_33966_length_638_cov_97.477612_g27102_i0forward_frame_1 - 0.22 11.7 2.3 2.1 8.6 0.2 2.3 2 0 0 2 2 2 0 CGGC domain Baculo_LEF-10 PF07206.11 NODE_33961_length_638_cov_111.338308_g27097_i0forward_frame_1 - 0.15 12.2 0.3 0.3 11.3 0.3 1.5 1 0 0 1 1 1 0 Baculovirus late expression factor 10 (LEF-10) CLZ PF16526.5 NODE_33960_length_638_cov_125.943615_g27096_i0reverse_frame_1 - 0.045 14.1 1.0 0.045 14.1 1.0 2.3 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HTH_Tnp_Tc3_1 PF11427.8 NODE_33960_length_638_cov_125.943615_g27096_i0reverse_frame_1 - 0.15 12.0 0.2 0.38 10.7 0.2 1.7 1 0 0 1 1 1 0 Tc3 transposase Methyltransf_21 PF05050.12 NODE_33954_length_638_cov_171.673300_g27090_i0reverse_frame_1 - 3.2e-05 24.0 0.0 4.6e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain Tox-MPTase5 PF15641.6 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_1 - 0.13 12.3 0.6 0.25 11.4 0.6 1.4 1 0 0 1 1 1 0 Metallopeptidase toxin 5 RPA_interact_N PF14766.6 NODE_33928_length_639_cov_2.627483_g27066_i0reverse_frame_1 - 3.6 7.3 6.9 0.96 9.1 0.4 2.5 2 0 0 2 2 2 0 Replication protein A interacting N-terminal Aminotran_3 PF00202.21 NODE_33928_length_639_cov_2.627483_g27066_i0forward_frame_1 - 1.7e-60 204.8 0.0 1.9e-60 204.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III DUF3652 PF12372.8 NODE_33928_length_639_cov_2.627483_g27066_i0forward_frame_1 - 0.0067 16.3 0.5 5.1 7.1 0.1 2.4 2 0 0 2 2 2 2 Huntingtin protein region Herpes_BLRF2 PF05812.12 NODE_33923_length_639_cov_51.610927_g27061_i0reverse_frame_1 - 0.013 15.6 2.6 0.029 14.5 2.6 1.5 1 0 0 1 1 1 0 Herpesvirus BLRF2 protein IglC PF11550.8 NODE_33923_length_639_cov_51.610927_g27061_i0reverse_frame_1 - 0.23 10.9 7.3 0.24 10.8 6.2 1.6 1 1 0 1 1 1 0 Intracellular growth locus C protein Beta_helix PF13229.6 NODE_33878_length_640_cov_40.016529_g27020_i0reverse_frame_3 - 2.5e-05 24.2 5.4 3.9e-05 23.5 5.4 1.3 1 0 0 1 1 1 1 Right handed beta helix region CagS PF16707.5 NODE_33869_length_640_cov_73.133884_g27012_i0reverse_frame_2 - 0.23 11.5 2.1 5.7 6.9 0.3 2.2 1 1 0 2 2 2 0 Cag pathogenicity island protein S of Helicobacter pylori WD40 PF00400.32 NODE_33868_length_640_cov_93.203306_g27011_i0reverse_frame_2 - 8.1e-06 26.5 0.0 0.015 16.2 0.0 3.2 3 0 0 3 3 3 2 WD domain, G-beta repeat ALMT PF11744.8 NODE_33842_length_641_cov_2.599010_g26991_i0reverse_frame_2 - 0.14 11.0 7.6 0.14 11.0 7.6 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF4140 PF13600.6 NODE_33841_length_641_cov_3.135314_g26990_i0reverse_frame_3 - 0.18 12.3 1.2 0.4 11.1 1.2 1.6 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) PSII PF00421.19 NODE_33838_length_641_cov_68.021452_g26987_i0forward_frame_2 - 0.23 10.1 3.9 0.29 9.8 3.9 1.1 1 0 0 1 1 1 0 Photosystem II protein AtpR PF12966.7 NODE_33833_length_641_cov_86.798680_g26982_i0reverse_frame_3 - 0.11 13.0 3.8 0.17 12.3 3.8 1.4 1 0 0 1 1 1 0 N-ATPase, AtpR subunit DUF996 PF06195.13 NODE_33833_length_641_cov_86.798680_g26982_i0reverse_frame_3 - 1.3 9.4 6.5 4.4 7.6 6.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF996) FliS_cochap PF16522.5 NODE_33833_length_641_cov_86.798680_g26982_i0forward_frame_2 - 0.13 12.2 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Flagellar FLiS export co-chaperone, HP1076 DUF637 PF04830.13 NODE_33819_length_641_cov_193.282178_g26969_i0reverse_frame_3 - 0.21 11.4 0.0 0.25 11.1 0.0 1.1 1 0 0 1 1 1 0 Possible hemagglutinin (DUF637) BCL9 PF11502.8 NODE_33808_length_641_cov_393.701320_g26959_i0forward_frame_3 - 0.058 13.2 0.2 0.13 12.1 0.2 1.6 1 0 0 1 1 1 0 B-cell lymphoma 9 protein KORA PF16509.5 NODE_33805_length_641_cov_1213.891089_g26956_i0reverse_frame_3 - 0.054 13.8 0.6 0.099 12.9 0.6 1.4 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor Ank_2 PF12796.7 NODE_33805_length_641_cov_1213.891089_g26956_i0reverse_frame_2 - 5.9e-28 97.3 0.1 6.8e-12 45.8 0.1 2.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_33805_length_641_cov_1213.891089_g26956_i0reverse_frame_2 - 3.7e-21 75.2 1.3 5e-09 36.5 0.1 3.7 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_33805_length_641_cov_1213.891089_g26956_i0reverse_frame_2 - 2.3e-19 69.2 0.1 1.2e-07 31.8 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_33805_length_641_cov_1213.891089_g26956_i0reverse_frame_2 - 3.4e-14 51.6 0.1 0.0006 20.1 0.0 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 NODE_33805_length_641_cov_1213.891089_g26956_i0reverse_frame_2 - 2e-12 47.0 1.0 0.00025 21.4 0.1 3.5 3 0 0 3 3 3 2 Ankyrin repeat Rad60-SLD PF11976.8 NODE_33800_length_641_cov_3632.590759_g26952_i0reverse_frame_2 - 1e-19 70.1 0.5 2e-19 69.2 0.5 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 NODE_33800_length_641_cov_3632.590759_g26952_i0reverse_frame_2 - 3.6e-10 39.5 0.4 5.9e-10 38.8 0.4 1.4 1 0 0 1 1 1 1 Ubiquitin family TraL PF07178.11 NODE_33790_length_642_cov_6.670511_g26942_i0forward_frame_2 - 0.015 15.7 0.1 0.027 14.9 0.1 1.4 1 0 0 1 1 1 0 TraL protein Ank_2 PF12796.7 NODE_33789_length_642_cov_35.116969_g26941_i0reverse_frame_3 - 1.1e-36 125.3 3.3 7.2e-17 61.8 0.3 3.1 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_33789_length_642_cov_35.116969_g26941_i0reverse_frame_3 - 5.2e-31 106.6 6.6 2.1e-08 34.5 0.0 4.0 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 NODE_33789_length_642_cov_35.116969_g26941_i0reverse_frame_3 - 5e-30 102.6 5.8 2e-05 24.8 0.1 6.0 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 NODE_33789_length_642_cov_35.116969_g26941_i0reverse_frame_3 - 2.9e-27 94.4 8.9 1.3e-08 35.0 0.1 5.2 1 1 4 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_33789_length_642_cov_35.116969_g26941_i0reverse_frame_3 - 4e-22 75.9 0.8 0.0027 18.1 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Peripla_BP_3 PF13377.6 NODE_33789_length_642_cov_35.116969_g26941_i0reverse_frame_3 - 0.048 14.0 2.0 3 8.1 0.2 2.8 2 1 1 3 3 3 0 Periplasmic binding protein-like domain YlzJ PF14035.6 NODE_33789_length_642_cov_35.116969_g26941_i0reverse_frame_3 - 0.078 13.2 0.0 57 4.0 0.0 3.7 3 1 1 4 4 4 0 YlzJ-like protein Nse4-Nse3_bdg PF15412.6 NODE_33789_length_642_cov_35.116969_g26941_i0reverse_frame_3 - 0.14 12.3 1.2 24 5.1 0.1 3.1 3 0 0 3 3 3 0 Binding domain of Nse4/EID3 to Nse3-MAGE MLANA PF14991.6 NODE_33789_length_642_cov_35.116969_g26941_i0forward_frame_3 - 0.092 13.0 0.8 0.15 12.3 0.8 1.5 1 0 0 1 1 1 0 Protein melan-A Planc_extracel PF07595.12 NODE_33789_length_642_cov_35.116969_g26941_i0forward_frame_3 - 0.88 9.5 5.2 0.19 11.5 0.8 2.3 2 0 0 2 2 2 0 Planctomycete extracellular Nucleoplasmin PF03066.15 NODE_33789_length_642_cov_35.116969_g26941_i0forward_frame_2 - 0.019 15.5 0.0 0.36 11.3 0.0 2.1 1 1 1 2 2 2 0 Nucleoplasmin/nucleophosmin domain ELF PF03317.13 NODE_33789_length_642_cov_35.116969_g26941_i0forward_frame_2 - 0.19 11.8 0.0 0.31 11.0 0.0 1.3 1 0 0 1 1 1 0 ELF protein MCM3AP_GANP PF16769.5 NODE_33786_length_642_cov_75.665568_g26938_i0reverse_frame_3 - 0.0038 15.6 2.5 0.0045 15.3 2.5 1.1 1 0 0 1 1 1 1 MCM3AP domain of GANP PRTP PF01366.18 NODE_33786_length_642_cov_75.665568_g26938_i0reverse_frame_3 - 0.0059 14.7 0.3 0.0092 14.1 0.3 1.3 1 0 0 1 1 1 1 Herpesvirus processing and transport protein CTNNB1_binding PF08347.11 NODE_33786_length_642_cov_75.665568_g26938_i0reverse_frame_3 - 0.26 11.4 2.8 0.43 10.7 2.8 1.3 1 1 0 1 1 1 0 N-terminal CTNNB1 binding ETF_alpha PF00766.19 NODE_33767_length_642_cov_258.069193_g26923_i0reverse_frame_3 - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Electron transfer flavoprotein FAD-binding domain Yippee-Mis18 PF03226.14 NODE_33762_length_642_cov_3309.794069_g26918_i0reverse_frame_2 - 6.3e-09 36.0 1.3 1.2e-08 35.1 1.1 1.4 1 1 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Spot_14 PF07084.12 ORF99461 - 0.011 15.9 5.7 0.051 13.7 5.7 1.9 1 1 0 1 1 1 0 Thyroid hormone-inducible hepatic protein Spot 14 COG2 PF06148.11 ORF99461 - 0.023 14.8 6.7 0.2 11.7 0.7 2.6 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Baculo_PEP_C PF04513.12 ORF99461 - 0.027 14.5 8.0 1.2 9.2 0.2 2.9 1 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3198 PF11433.8 ORF99461 - 0.047 13.6 3.0 0.12 12.3 1.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3198) Synaptobrevin PF00957.21 ORF99461 - 0.67 9.8 8.8 0.99 9.2 0.6 3.1 3 1 0 3 3 3 0 Synaptobrevin ZYG-11_interact PF05884.12 ORF99461 - 1.5 8.2 4.5 2 7.8 0.6 2.1 2 0 0 2 2 2 0 Interactor of ZYG-11 AI-2E_transport PF01594.16 ORF99461 - 4.6 6.3 4.9 9.7 5.2 0.3 2.2 2 0 0 2 2 2 0 AI-2E family transporter DUF2115 PF09888.9 ORF99461 - 5.8 7.4 7.8 1.9 9.0 2.1 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2115) Orf78 PF06024.12 ORF98793 - 0.045 14.0 1.6 0.81 10.0 0.1 2.2 2 0 0 2 2 2 0 Orf78 (ac78) FtsJ PF01728.19 ORF98703 - 3.9e-42 144.4 0.0 5e-42 144.0 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Acyl-CoA_dh_1 PF00441.24 ORF97873 - 1e-46 158.9 1.3 1.2e-46 158.6 1.3 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF97873 - 2.5e-15 56.9 0.6 3.3e-15 56.5 0.6 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF97873 - 0.0013 18.9 0.0 0.0024 18.0 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Glyco_hydro_114 PF03537.13 ORF97873 - 0.011 15.0 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 0 Glycoside-hydrolase family GH114 MORN PF02493.20 ORF93648 - 9.5e-09 34.6 5.2 0.007 16.2 0.0 4.3 4 0 0 4 4 4 3 MORN repeat Aldo_ket_red PF00248.21 ORF93461 - 1.5e-19 70.3 0.0 1.8e-19 70.1 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Atg29_N PF18388.1 ORF93461 - 0.15 11.9 0.1 0.36 10.7 0.1 1.6 1 0 0 1 1 1 0 Atg29 N-terminal domain TPR_19 PF14559.6 ORF9121 - 4e-08 33.6 3.5 0.26 11.8 0.0 3.9 1 1 3 4 4 4 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF9121 - 9.1e-07 29.0 0.7 0.066 13.5 0.1 3.0 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 HrpB1_HrpK PF09613.10 ORF9121 - 1.1e-05 25.0 0.2 0.034 13.8 0.0 3.1 1 1 2 3 3 3 1 Bacterial type III secretion protein (HrpB1_HrpK) PPR_2 PF13041.6 ORF9121 - 0.00085 19.5 0.5 0.01 16.0 0.2 2.8 3 0 0 3 3 3 1 PPR repeat family TPR_14 PF13428.6 ORF9121 - 0.0024 18.5 0.0 26 6.0 0.0 3.8 3 1 1 4 4 4 0 Tetratricopeptide repeat RasGEF_N PF00618.20 ORF9121 - 0.0078 16.4 1.9 0.19 12.0 0.0 2.4 2 0 0 2 2 2 1 RasGEF N-terminal motif ATP13 PF12921.7 ORF9121 - 0.034 14.0 1.4 0.33 10.8 0.2 2.4 2 0 0 2 2 2 0 Mitochondrial ATPase expression TPR_6 PF13174.6 ORF9121 - 0.042 14.5 0.4 1.2e+02 3.6 0.1 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF9121 - 0.051 13.8 5.8 3.1 8.2 0.1 4.4 5 0 0 5 5 5 0 Tetratricopeptide repeat PPR PF01535.20 ORF9121 - 0.069 13.4 0.0 0.53 10.7 0.0 2.4 2 0 0 2 2 2 0 PPR repeat SRP_TPR_like PF17004.5 ORF9121 - 0.076 13.0 6.5 1.1 9.4 1.1 2.9 1 1 1 2 2 2 0 Putative TPR-like repeat PriA_C PF18074.1 ORF9121 - 0.089 13.6 6.7 0.21 12.4 0.6 3.5 2 1 1 4 4 4 0 Primosomal protein N C-terminal domain TPR_MalT PF17874.1 ORF9121 - 0.15 11.4 1.7 0.91 8.8 1.2 2.3 1 1 2 3 3 3 0 MalT-like TPR region Prp18 PF02840.15 ORF9121 - 0.69 10.0 6.3 0.34 11.0 2.6 2.2 2 1 0 2 2 2 0 Prp18 domain TPR_17 PF13431.6 ORF9121 - 0.71 10.4 2.7 4.7 7.8 0.1 3.0 3 1 1 4 4 4 0 Tetratricopeptide repeat L27_N PF09060.10 ORF9121 - 0.75 9.9 5.0 1 9.5 0.2 3.0 3 0 0 3 3 3 0 L27_N Peptidase_S28 PF05577.12 ORF9121 - 0.92 8.2 3.7 0.54 9.0 0.1 1.9 2 0 0 2 2 2 0 Serine carboxypeptidase S28 Zip PF02535.22 ORF90676 - 0.12 11.5 0.9 0.14 11.4 0.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter APC_u15 PF16636.5 ORF90676 - 6.6 7.2 9.2 0.73 10.3 1.9 2.3 1 1 1 2 2 2 0 Unstructured region on APC between APC_crr regions 5 and 6 YMF19 PF02326.15 ORF90676 - 7 7.5 13.0 7.3 7.5 6.9 2.9 1 1 1 2 2 2 0 Plant ATP synthase F0 AUX_IAA PF02309.16 ORF90202 - 8.1 6.2 10.8 13 5.6 10.8 1.3 1 0 0 1 1 1 0 AUX/IAA family AAA PF00004.29 ORF89593 - 2.5e-15 57.1 0.0 3.7e-15 56.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF89593 - 2.4e-05 24.4 0.0 9.9e-05 22.4 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF89593 - 7.5e-05 23.0 0.6 1.3 9.3 0.0 3.0 1 1 2 3 3 3 2 AAA domain AAA_16 PF13191.6 ORF89593 - 0.0017 18.8 0.4 0.0077 16.6 0.4 2.2 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF89593 - 0.0026 17.0 0.0 0.0072 15.5 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF815) AAA_11 PF13086.6 ORF89593 - 0.0089 15.8 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF89593 - 0.011 15.9 0.0 0.025 14.8 0.0 1.7 1 1 1 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF89593 - 0.024 15.0 0.0 0.044 14.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase IPT PF01745.16 ORF89593 - 0.039 13.3 0.0 0.069 12.5 0.0 1.5 1 0 0 1 1 1 0 Isopentenyl transferase Mg_chelatase PF01078.21 ORF89593 - 0.051 13.0 0.3 3.1 7.1 0.1 2.2 1 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 ORF89593 - 0.052 14.1 0.0 0.091 13.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF89593 - 0.064 13.3 0.0 0.18 11.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain Protoglobin PF11563.8 ORF89593 - 0.064 13.1 0.0 0.096 12.6 0.0 1.3 1 0 0 1 1 1 0 Protoglobin TIP49 PF06068.13 ORF89593 - 0.12 11.5 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain RuvB_N PF05496.12 ORF89593 - 0.19 11.5 0.0 0.41 10.4 0.0 1.6 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Peptidase_C1 PF00112.23 ORF88365 - 2.4e-33 116.1 3.2 3.1e-33 115.7 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF88365 - 0.00052 19.9 0.0 0.0029 17.5 0.0 2.1 2 1 0 2 2 2 1 Peptidase family C1 propeptide Peptidase_C2 PF00648.21 ORF88365 - 0.032 13.2 0.1 0.04 12.9 0.1 1.2 1 0 0 1 1 1 0 Calpain family cysteine protease Peptidase_C1_2 PF03051.15 ORF88365 - 0.093 11.5 0.1 1.1 8.0 0.1 2.0 1 1 1 2 2 2 0 Peptidase C1-like family Erg28 PF03694.13 ORF87063 - 0.17 12.3 1.1 0.21 12.0 0.1 1.6 2 0 0 2 2 2 0 Erg28 like protein Peptidase_C14 PF00656.22 ORF86914 - 3.2e-18 66.6 0.2 6.3e-18 65.6 0.2 1.4 1 1 0 1 1 1 1 Caspase domain Ribul_P_3_epim PF00834.19 ORF86222 - 6e-47 159.6 0.8 1e-46 158.9 0.8 1.3 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 ORF86222 - 0.0035 17.1 0.1 0.0054 16.5 0.1 1.3 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain N_NLPC_P60 PF12912.7 ORF85577 - 0.002 18.5 0.1 0.0041 17.5 0.1 1.5 1 0 0 1 1 1 1 NLPC_P60 stabilising domain, N term SBF_like PF13593.6 ORF85129 - 2.6e-31 109.1 12.1 3e-31 108.9 12.1 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) SBF PF01758.16 ORF85129 - 1.8e-07 31.0 5.6 3.4e-07 30.2 5.6 1.5 1 0 0 1 1 1 1 Sodium Bile acid symporter family EmrE PF13536.6 ORF85129 - 0.048 13.2 5.6 0.056 13.0 5.6 1.2 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter Apolipoprotein PF01442.18 ORF84752 - 0.007 16.3 1.8 0.007 16.3 1.8 1.6 2 0 0 2 2 2 1 Apolipoprotein A1/A4/E domain DUF4140 PF13600.6 ORF84752 - 0.19 12.1 1.9 10 6.6 0.0 2.7 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) Ank_4 PF13637.6 ORF84693 - 2.5e-06 27.9 0.1 0.21 12.2 0.0 3.7 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF84693 - 0.00086 19.8 0.9 0.0032 18.0 0.8 2.2 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF84693 - 0.032 14.7 0.0 19 6.2 0.0 3.1 2 0 0 2 2 2 0 Ankyrin repeat SHIPPO-rpt PF07004.12 ORF84497 - 3.5 8.7 5.6 49 5.1 0.1 3.8 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat Syntaxin-6_N PF09177.11 ORF82514 - 0.047 14.2 3.6 0.038 14.6 1.7 1.8 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Uds1 PF15456.6 ORF82514 - 0.55 10.4 4.2 0.86 9.8 3.0 1.9 1 1 1 2 2 2 0 Up-regulated During Septation # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks91.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks91.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks91.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks91.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:16:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Thioredoxin_4 PF13462.6 ORF77819 - 2.2e-09 37.7 0.1 5.5e-09 36.4 0.1 1.6 1 1 0 1 1 1 1 Thioredoxin Malate_synthase PF01274.22 ORF76623 - 3.4e-65 220.3 1.0 3.8e-65 220.1 1.0 1.0 1 0 0 1 1 1 1 Malate synthase TetR_C_8 PF14278.6 ORF76623 - 0.083 13.0 0.0 0.27 11.4 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator C-terminal region EutQ PF06249.12 ORF74199 - 7.8e-69 230.3 0.0 9.6e-69 230.0 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.12 ORF74199 - 4e-08 32.8 0.0 9.1e-08 31.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 ORF74199 - 4.1e-06 26.4 0.0 9e-06 25.3 0.0 1.5 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 ORF74199 - 0.02 14.8 0.0 0.039 13.9 0.0 1.4 1 0 0 1 1 1 0 AraC-like ligand binding domain AraC_binding_2 PF14525.6 ORF74199 - 0.13 11.9 0.0 0.39 10.4 0.0 1.7 3 0 0 3 3 3 0 AraC-binding-like domain Cupin_6 PF12852.7 ORF74199 - 0.16 11.7 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Cupin GET2 PF08690.10 ORF74062 - 0.072 12.8 2.9 0.11 12.1 2.9 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 BCAS2 PF05700.11 ORF73563 - 4.4e-18 65.7 11.8 1.6e-15 57.3 11.8 2.0 1 1 0 1 1 1 1 Breast carcinoma amplified sequence 2 (BCAS2) FlxA PF14282.6 ORF73563 - 0.49 10.4 6.4 1.1 9.3 6.4 1.6 1 0 0 1 1 1 0 FlxA-like protein Isochorismatase PF00857.20 ORF73528 - 1e-30 107.2 0.2 2.3e-30 106.0 0.2 1.5 1 1 0 1 1 1 1 Isochorismatase family FAM53 PF15242.6 ORF73528 - 0.22 11.3 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Family of FAM53 Ras PF00071.22 ORF73127 - 4.1e-45 153.3 0.1 5e-45 153.0 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF73127 - 1.2e-27 96.5 0.1 3.2e-27 95.2 0.0 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF73127 - 1.4e-10 40.9 0.0 2e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family AAA_7 PF12775.7 ORF73127 - 0.033 13.7 0.0 0.054 13.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 ORF73127 - 0.051 13.7 0.0 0.088 12.9 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase Lsm_C PF14894.6 ORF73127 - 0.085 12.6 0.4 0.21 11.4 0.1 1.7 2 0 0 2 2 2 0 Lsm C-terminal G-alpha PF00503.20 ORF73127 - 0.099 11.8 0.5 12 5.0 0.0 2.3 2 1 0 2 2 2 0 G-protein alpha subunit Pkinase PF00069.25 ORF723 - 9e-25 87.5 1.2 1.1e-24 87.2 1.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF723 - 1.3e-15 57.4 0.4 1.7e-15 57.0 0.4 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF723 - 6.7e-08 32.1 0.1 1.3e-07 31.2 0.1 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF723 - 3.3e-07 30.5 0.0 0.0008 19.4 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF723 - 2.5e-05 24.0 0.2 3.7e-05 23.4 0.2 1.4 1 0 0 1 1 1 1 RIO1 family DUF1679 PF07914.11 ORF723 - 0.0087 15.0 0.2 0.02 13.8 0.2 1.5 1 1 1 2 2 2 2 Protein of unknown function (DUF1679) Kinase-like PF14531.6 ORF723 - 0.044 13.1 1.4 0.056 12.7 0.2 1.8 2 1 1 3 3 3 0 Kinase-like NAD_binding_1 PF00175.21 ORF71682 - 2.6e-23 82.8 0.0 5e-23 81.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF71682 - 4.1e-14 52.7 0.0 6.4e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF71682 - 3.3e-06 27.3 0.0 1.6e-05 25.0 0.0 1.8 1 1 1 2 2 2 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF71682 - 0.094 13.2 0.2 0.16 12.4 0.2 1.4 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Pro_isomerase PF00160.21 ORF66722 - 1.1e-17 64.8 0.1 2.1e-17 63.8 0.0 1.5 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rotamase PF00639.21 ORF66722 - 2.2e-17 63.8 0.1 3.7e-17 63.1 0.1 1.4 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF66722 - 3e-12 47.1 0.5 6.1e-12 46.1 0.5 1.4 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF66722 - 4.1e-05 24.4 0.1 6.3e-05 23.8 0.1 1.3 1 1 0 1 1 1 1 PPIC-type PPIASE domain DUF1619 PF07773.11 ORF65804 - 0.12 12.2 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1619) Cdd1 PF11731.8 ORF64690 - 0.014 15.6 0.0 0.022 15.0 0.0 1.3 1 0 0 1 1 1 0 Pathogenicity locus UVR PF02151.19 ORF63468 - 0.12 12.1 0.6 0.28 11.0 0.6 1.6 1 0 0 1 1 1 0 UvrB/uvrC motif BTB PF00651.31 ORF62364 - 0.0081 16.4 0.0 0.031 14.5 0.0 1.9 2 0 0 2 2 2 1 BTB/POZ domain Isochorismatase PF00857.20 ORF57995 - 3.6e-32 111.9 0.3 8.4e-32 110.7 0.3 1.5 1 1 0 1 1 1 1 Isochorismatase family FAM53 PF15242.6 ORF57995 - 0.22 11.3 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Family of FAM53 Glyco_tranf_2_4 PF13704.6 ORF5634 - 0.053 14.0 0.1 0.16 12.5 0.0 1.8 2 0 0 2 2 2 0 Glycosyl transferase family 2 DUF4081 PF13312.6 ORF53873 - 0.1 12.8 4.8 2.7 8.3 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4081) Exonuc_VII_L PF02601.15 ORF53873 - 0.64 9.5 12.2 0.81 9.2 12.2 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF572 PF04502.13 ORF53873 - 2.2 7.8 17.5 2.6 7.6 17.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF572) DnaJ PF00226.31 ORF5127 - 1.2e-24 86.2 5.9 2.4e-24 85.2 5.9 1.5 1 0 0 1 1 1 1 DnaJ domain DUF5130 PF17174.4 ORF5127 - 0.13 12.5 0.0 8.7 6.6 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5130) Ribosomal_L27A PF00828.19 ORF5127 - 0.19 12.4 3.4 0.13 12.9 1.5 1.8 2 0 0 2 2 2 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Peptidase_M35 PF02102.15 ORF48039 - 0.076 11.9 0.4 0.11 11.3 0.4 1.2 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family SNF PF00209.18 ORF47881 - 9.7e-26 90.5 4.8 1.1e-25 90.3 4.8 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family LRR_6 PF13516.6 ORF47855 - 1e-08 34.5 1.1 0.00082 19.2 0.1 3.5 3 0 0 3 3 3 2 Leucine Rich repeat LRR_1 PF00560.33 ORF47855 - 3.3e-05 23.9 0.6 3.9 8.4 0.0 3.7 3 0 0 3 3 3 2 Leucine Rich Repeat LRR_8 PF13855.6 ORF47855 - 0.0073 16.0 3.8 6.7 6.5 3.5 3.2 2 1 0 2 2 2 1 Leucine rich repeat LRR_4 PF12799.7 ORF47855 - 0.024 15.1 2.4 0.065 13.7 0.7 2.4 2 1 0 2 2 2 0 Leucine Rich repeats (2 copies) Helicase_C PF00271.31 ORF47076 - 9.5e-19 67.8 0.3 3e-18 66.2 0.0 1.9 2 1 0 2 2 2 1 Helicase conserved C-terminal domain HTH_18 PF12833.7 ORF45678 - 7.3e-18 64.6 0.0 1.3e-17 63.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF45678 - 3.7e-09 36.4 0.1 9.3e-05 22.4 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family RDD PF06271.12 ORF45678 - 0.023 14.9 0.1 0.031 14.5 0.1 1.4 1 0 0 1 1 1 0 RDD family HTH_38 PF13936.6 ORF45678 - 0.17 11.6 0.1 2.3 8.1 0.0 2.6 3 0 0 3 3 3 0 Helix-turn-helix domain PRAI PF00697.22 ORF42236 - 3.2e-64 216.3 0.0 3.7e-64 216.1 0.0 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Acatn PF13000.7 ORF40128 - 1.9e-34 119.1 16.1 1.1e-33 116.6 16.1 1.9 1 1 0 1 1 1 1 Acetyl-coenzyme A transporter 1 MFS_1 PF07690.16 ORF40128 - 0.00056 18.9 8.8 0.00073 18.6 8.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Aminotran_3 PF00202.21 ORF39996 - 5.6e-46 157.0 0.0 6.2e-46 156.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III WD40 PF00400.32 ORF38993 - 1.5e-09 38.3 1.2 0.0071 17.2 0.0 4.5 5 0 0 5 5 5 2 WD domain, G-beta repeat WD40_3 PF15911.5 ORF38993 - 0.0021 18.0 0.0 0.021 14.8 0.0 2.4 1 1 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF38993 - 0.01 16.1 0.0 0.57 10.5 0.0 2.7 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain Cyt-b5 PF00173.28 ORF37899 - 1.6e-38 130.7 0.1 6.2e-18 64.7 0.0 2.2 2 0 0 2 2 2 2 Cytochrome b5-like Heme/Steroid binding domain Jiv90 PF14901.6 ORF37899 - 0.043 14.0 0.0 9.8 6.4 0.0 2.3 2 0 0 2 2 2 0 Cleavage inducing molecular chaperone EFP_N PF08207.12 ORF37899 - 0.13 12.3 0.0 8.3 6.5 0.0 2.4 2 0 0 2 2 2 0 Elongation factor P (EF-P) KOW-like domain B-block_TFIIIC PF04182.12 ORF36660 - 0.0034 17.5 0.1 0.0084 16.3 0.1 1.7 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC YjeF_N PF03853.15 ORF3582 - 1.6e-38 132.3 0.0 1.9e-38 132.0 0.0 1.1 1 0 0 1 1 1 1 YjeF-related protein N-terminus YjeF_N PF03853.15 ORF3566 - 3.9e-38 131.0 0.0 4.7e-38 130.8 0.0 1.1 1 0 0 1 1 1 1 YjeF-related protein N-terminus Importin_rep_4 PF18808.1 ORF3438 - 0.66 10.3 5.2 0.2 12.0 0.9 2.2 2 0 0 2 2 2 0 Importin repeat DUF2220 PF09983.9 ORF3438 - 5.3 6.4 14.2 0.65 9.4 4.0 3.0 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria C-term(DUF2220) N_NLPC_P60 PF12912.7 ORF3399 - 0.002 18.5 0.1 0.0041 17.5 0.1 1.5 1 0 0 1 1 1 1 NLPC_P60 stabilising domain, N term DUF1995 PF09353.10 ORF32452 - 3.5e-07 30.5 0.0 4.3e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1995) DUF5615 PF18480.1 ORF32452 - 0.14 11.9 0.0 0.43 10.4 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF5615) DUF2162 PF09930.9 ORF31597 - 0.0065 15.9 3.0 0.008 15.6 3.0 1.3 1 0 0 1 1 1 1 Predicted transporter (DUF2162) CUB PF00431.20 ORF31247 - 0.026 14.9 0.0 0.097 13.0 0.0 1.9 1 1 0 1 1 1 0 CUB domain DUF1664 PF07889.12 ORF28024 - 0.004 17.2 0.5 0.004 17.2 0.5 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF1664) DASH_Dam1 PF08653.10 ORF28024 - 0.012 15.4 2.2 0.14 12.0 0.3 2.5 2 0 0 2 2 2 0 DASH complex subunit Dam1 YabA PF06156.13 ORF28024 - 0.036 14.7 6.4 0.036 14.7 6.4 3.7 1 1 3 4 4 4 0 Initiation control protein YabA EMP24_GP25L PF01105.24 ORF28024 - 0.064 13.2 0.6 0.064 13.2 0.6 2.5 1 1 1 3 3 3 0 emp24/gp25L/p24 family/GOLD APG6_N PF17675.1 ORF28024 - 0.25 11.9 40.6 0.15 12.6 22.3 2.3 1 1 0 2 2 2 0 Apg6 coiled-coil region Flagellin_C PF00700.21 ORF28024 - 0.56 10.6 4.9 0.36 11.2 0.3 2.5 2 1 1 3 3 3 0 Bacterial flagellin C-terminal helical region AAA_13 PF13166.6 ORF28024 - 1.3 7.6 17.2 1.7 7.2 17.2 1.0 1 0 0 1 1 1 0 AAA domain CENP-F_leu_zip PF10473.9 ORF28024 - 1.7 8.7 35.8 0.033 14.2 17.7 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HOOK PF05622.12 ORF28024 - 1.9 6.6 32.9 3.7 5.6 30.0 1.9 1 1 1 2 2 2 0 HOOK protein KASH_CCD PF14662.6 ORF28024 - 2.3 8.0 35.2 0.19 11.5 18.5 2.3 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF4407 PF14362.6 ORF28024 - 2.7 7.3 19.9 4 6.7 19.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spc7 PF08317.11 ORF28024 - 3.5 6.4 31.4 0.36 9.7 17.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Sec34 PF04136.15 ORF28024 - 4.5 7.1 14.8 1.5 8.7 1.9 2.9 2 1 1 3 3 3 0 Sec34-like family DUF842 PF05811.13 ORF28024 - 5 6.8 13.9 0.21 11.3 3.9 2.8 2 1 1 3 3 3 0 Eukaryotic protein of unknown function (DUF842) DUF5082 PF16888.5 ORF28024 - 6.1 7.2 21.3 0.6 10.4 4.1 2.8 2 2 2 4 4 4 0 Domain of unknown function (DUF5082) GAS PF13851.6 ORF28024 - 9.5 5.5 34.2 0.051 12.9 16.8 2.3 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding FUSC PF04632.12 ORF28024 - 9.8 4.6 21.7 43 2.4 21.7 1.7 1 1 0 1 1 1 0 Fusaric acid resistance protein family Seryl_tRNA_N PF02403.22 ORF28024 - 9.9 6.5 27.2 4.1 7.7 7.7 3.4 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Golgin_A5 PF09787.9 ORF27399 - 0.023 14.2 6.3 0.032 13.7 6.3 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 ORF27399 - 0.11 11.8 5.6 0.13 11.5 5.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF27399 - 0.51 10.4 9.9 0.66 10.0 8.7 1.8 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding CENP-F_leu_zip PF10473.9 ORF27399 - 0.67 10.0 9.9 16 5.5 10.2 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Aldo_ket_red PF00248.21 ORF2588 - 1.9e-20 73.2 0.0 2.2e-20 73.0 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Atg29_N PF18388.1 ORF2588 - 0.086 12.7 0.1 0.2 11.5 0.1 1.6 1 0 0 1 1 1 0 Atg29 N-terminal domain DUF3606 PF12244.8 ORF2588 - 0.12 12.4 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3606) PAN_1 PF00024.26 ORF25613 - 3.6e-05 23.6 3.7 0.0017 18.3 0.6 2.4 1 1 1 2 2 2 2 PAN domain PAN_2 PF08276.11 ORF25613 - 0.00049 20.2 7.0 0.047 13.8 0.5 2.5 2 1 0 2 2 2 2 PAN-like domain PAN_3 PF08277.12 ORF25613 - 0.033 14.0 2.9 3.9 7.3 0.2 2.4 2 0 0 2 2 2 0 PAN-like domain PAN_4 PF14295.6 ORF25613 - 0.31 11.0 11.4 0.75 9.8 0.1 3.6 3 1 1 4 4 4 0 PAN domain CTP_transf_like PF01467.26 ORF2560 - 1.9e-37 128.6 0.0 2.3e-37 128.4 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like Tub PF01167.18 ORF25157 - 1.8e-06 27.9 5.6 5.4e-06 26.3 0.3 2.4 1 1 1 2 2 2 2 Tub family Cytochrom_C1 PF02167.15 ORF2454 - 1.1e-33 116.9 0.1 1.3e-33 116.6 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C1 family Abhydro_lipase PF04083.16 ORF22407 - 3.7e-14 52.0 0.1 2.9e-13 49.2 0.0 2.2 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF22407 - 8.8e-14 51.8 0.0 1e-13 51.6 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF22407 - 2e-05 24.0 0.0 4.1e-05 23.0 0.0 1.6 1 1 0 1 1 1 1 Serine aminopeptidase, S33 DUF2624 PF11116.8 ORF2239 - 0.027 15.3 0.1 0.069 14.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2624) EssA PF10661.9 ORF2239 - 1.6 8.5 9.1 2.5 7.9 8.9 1.5 1 1 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA JHY PF15261.6 ORF2239 - 9.6 6.9 14.5 0.31 11.7 7.6 1.9 2 0 0 2 2 2 0 Jhy protein Atg14 PF10186.9 ORF2202 - 0.0049 16.0 6.3 0.0063 15.7 6.3 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2594 PF10769.9 ORF2202 - 0.022 14.8 1.0 0.12 12.4 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2594) Cep57_MT_bd PF06657.13 ORF2202 - 0.038 14.4 11.0 0.24 11.9 4.3 2.3 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Mod_r PF07200.13 ORF2202 - 0.047 13.8 12.7 0.24 11.5 7.7 2.2 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Fez1 PF06818.15 ORF2202 - 0.15 12.5 11.6 0.25 11.8 11.7 1.4 1 1 0 1 1 1 0 Fez1 AAA_13 PF13166.6 ORF2202 - 0.2 10.3 3.2 0.24 10.0 3.2 1.2 1 0 0 1 1 1 0 AAA domain COX16 PF14138.6 ORF2202 - 0.31 11.6 2.2 0.82 10.2 2.2 1.7 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 Bacillus_HBL PF05791.11 ORF2202 - 0.32 10.8 4.5 0.17 11.7 1.2 1.8 1 1 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) FlxA PF14282.6 ORF2202 - 0.59 10.1 10.5 0.16 12.0 4.0 2.2 2 0 0 2 2 2 0 FlxA-like protein Sipho_Gp157 PF05565.11 ORF2202 - 0.74 9.8 9.2 0.25 11.4 6.0 1.7 1 1 1 2 2 2 0 Siphovirus Gp157 ACCA PF03255.14 ORF2202 - 0.85 9.5 5.0 2.1 8.2 2.7 2.5 2 1 0 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF2730 PF10805.8 ORF2202 - 1.4 9.0 5.5 0.86 9.7 0.6 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2730) Lectin_N PF03954.14 ORF2202 - 1.5 8.5 6.8 3.7 7.3 2.8 2.3 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain Cep57_CLD_2 PF14197.6 ORF2202 - 2.5 8.2 17.5 1.3 9.2 7.9 3.6 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 YabA PF06156.13 ORF2202 - 2.8 8.6 9.2 36 5.1 0.3 2.7 1 1 1 2 2 2 0 Initiation control protein YabA DUF724 PF05266.14 ORF2202 - 3.5 7.4 9.8 2.1 8.2 7.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Spc7 PF08317.11 ORF2202 - 4.4 6.1 13.6 7.9 5.3 13.6 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein Sec2p PF06428.11 ORF2202 - 4.4 7.4 16.2 0.83 9.7 10.0 2.5 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p Histone_HNS PF00816.21 ORF2202 - 4.4 8.2 9.5 42 5.1 8.2 2.2 1 1 1 2 2 2 0 H-NS histone family GrpE PF01025.19 ORF2202 - 4.6 6.9 9.0 1.6 8.4 4.7 2.0 2 0 0 2 2 2 0 GrpE DivIC PF04977.15 ORF2202 - 6.1 6.7 16.7 1.3 8.8 6.3 3.1 2 1 1 3 3 3 0 Septum formation initiator bZIP_2 PF07716.15 ORF2202 - 8.1 6.6 18.1 1.2 9.3 0.5 3.5 2 1 1 3 3 3 0 Basic region leucine zipper TMF_DNA_bd PF12329.8 ORF2202 - 9.4 6.3 15.5 3.6 7.7 10.2 2.6 2 2 1 3 3 3 0 TATA element modulatory factor 1 DNA binding Peptidase_C14 PF00656.22 ORF20493 - 8.5e-06 25.9 0.0 1.3e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Caspase domain DSBA PF01323.20 ORF19794 - 4e-14 52.8 0.0 4.7e-14 52.6 0.0 1.1 1 0 0 1 1 1 1 DSBA-like thioredoxin domain Phe_ZIP PF08916.11 ORF19234 - 0.046 14.4 0.3 0.1 13.4 0.3 1.6 1 0 0 1 1 1 0 Phenylalanine zipper UCH PF00443.29 ORF18878 - 1.3e-17 64.2 0.5 1.5e-17 64.0 0.5 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Peptidase_C98 PF15499.6 ORF18878 - 0.0058 16.1 0.6 0.0088 15.5 0.4 1.4 1 1 0 1 1 1 1 Ubiquitin-specific peptidase-like, SUMO isopeptidase UCH_1 PF13423.6 ORF18878 - 0.012 15.3 0.6 0.019 14.5 0.4 1.4 1 1 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase RNA_pol_Rpc4 PF05132.14 ORF18878 - 0.058 13.8 1.6 0.08 13.4 1.6 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF3292 PF11696.8 ORF18878 - 0.21 9.9 3.7 0.27 9.6 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) Presenilin PF01080.17 ORF18878 - 0.47 9.2 1.6 0.55 8.9 1.6 1.1 1 0 0 1 1 1 0 Presenilin DUF2722 PF10846.8 ORF18878 - 1.2 8.1 8.1 1.5 7.7 8.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) DUF913 PF06025.12 ORF18878 - 1.4 7.8 5.4 1.8 7.5 5.4 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF3987 PF13148.6 ORF18878 - 1.9 7.4 4.8 2.5 7.0 4.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) THOC2_N PF16134.5 ORF18878 - 2.6 6.6 8.4 3.4 6.2 8.4 1.1 1 0 0 1 1 1 0 THO complex subunit 2 N-terminus RPGR1_C PF18111.1 ORF1819 - 0.052 13.5 0.1 0.12 12.2 0.1 1.6 1 1 0 1 1 1 0 Retinitis pigmentosa G-protein regulator interacting C-terminal zf-C2H2_4 PF13894.6 ORF1819 - 3.9 8.6 6.7 3.8 8.6 1.1 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger Peptidase_M35 PF02102.15 ORF16847 - 0.081 11.8 0.5 0.12 11.2 0.5 1.2 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family DUF3372 PF11852.8 ORF16448 - 5.2 6.5 9.3 6.1 6.3 2.8 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3372) Golgin_A5 PF09787.9 ORF15984 - 0.023 14.2 6.3 0.032 13.7 6.3 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 ORF15984 - 0.11 11.8 5.6 0.13 11.5 5.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF15984 - 0.51 10.4 9.9 0.66 10.0 8.7 1.8 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding CENP-F_leu_zip PF10473.9 ORF15984 - 0.67 10.0 9.9 16 5.5 10.2 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 NicO PF03824.16 ORF1453 - 3.7e-28 98.7 4.8 4.4e-28 98.4 4.8 1.0 1 0 0 1 1 1 1 High-affinity nickel-transport protein OAD_gamma PF04277.13 ORF1453 - 0.15 12.6 0.5 0.63 10.7 0.0 2.1 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain DUF2754 PF10953.8 ORF1453 - 0.36 11.1 5.7 2.4 8.5 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2754) CD52 PF15116.6 ORF1453 - 0.54 10.3 2.4 0.34 11.0 0.3 1.8 2 0 0 2 2 2 0 CAMPATH-1 antigen DUF2231 PF09990.9 ORF1453 - 4 7.9 9.9 0.39 11.2 3.0 2.7 1 1 0 2 2 2 0 Predicted membrane protein (DUF2231) Kelch_1 PF01344.25 ORF14375 - 1.7e-23 81.9 0.3 2.8e-11 42.8 0.1 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 ORF14375 - 1.4e-20 73.1 0.0 2.7e-08 33.9 0.0 3.3 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF14375 - 9.4e-16 57.5 0.1 3.3e-07 30.4 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 ORF14375 - 1.6e-15 56.4 1.9 5e-07 29.4 0.1 2.6 2 1 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF14375 - 2.2e-15 56.3 0.1 2.8e-06 27.2 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF14375 - 8.6e-15 54.5 0.0 4e-06 26.7 0.0 2.3 2 0 0 2 2 2 2 Galactose oxidase, central domain FANCD2OS PF15124.6 ORF14375 - 0.00036 20.8 0.0 0.00049 20.4 0.0 1.2 1 0 0 1 1 1 1 FANCD2 opposite strand protein Prominin PF05478.11 ORF13307 - 0.18 9.8 2.0 0.21 9.5 2.0 1.1 1 0 0 1 1 1 0 Prominin YpjP PF14005.6 ORF13307 - 0.3 11.1 1.9 4 7.5 0.2 2.4 1 1 0 2 2 2 0 YpjP-like protein 4HB_MCP_1 PF12729.7 ORF13307 - 0.44 10.1 5.6 0.62 9.6 5.6 1.1 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction TauE PF01925.19 ORF11831 - 0.012 15.2 0.8 0.017 14.8 0.8 1.1 1 0 0 1 1 1 0 Sulfite exporter TauE/SafE Methyltransf_11 PF08241.12 ORF10815 - 0.021 15.5 0.1 0.18 12.4 0.0 2.2 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF10815 - 0.021 14.7 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 ORF10815 - 0.024 15.4 0.1 0.099 13.4 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain AAA PF00004.29 ORF104897 - 3.9e-06 27.3 0.0 6.5e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Golgin_A5 PF09787.9 ORF103139 - 0.023 14.2 6.3 0.032 13.7 6.3 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 ORF103139 - 0.11 11.8 5.6 0.13 11.5 5.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF103139 - 0.51 10.4 9.9 0.66 10.0 8.7 1.8 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding CENP-F_leu_zip PF10473.9 ORF103139 - 0.67 10.0 9.9 16 5.5 10.2 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TCR PF03638.15 NODE_34183_length_634_cov_2.527546_g27290_i0reverse_frame_1 - 1.1e-06 28.8 33.7 1.2e-05 25.5 8.1 2.8 3 0 0 3 3 3 2 Tesmin/TSO1-like CXC domain, cysteine-rich domain zf-CXXC PF02008.20 NODE_34181_length_634_cov_3.472454_g27288_i0forward_frame_1 - 3.3 7.8 12.6 0.098 12.7 1.1 2.4 2 0 0 2 2 2 0 CXXC zinc finger domain DctA-YdbH PF11739.8 NODE_34180_length_634_cov_3.958264_g27287_i0reverse_frame_1 - 2.8e-46 157.9 0.1 3.2e-46 157.7 0.1 1.1 1 0 0 1 1 1 1 Dicarboxylate transport RXLR PF16810.5 NODE_34178_length_634_cov_41.071786_g27286_i0forward_frame_1 - 0.027 14.9 9.8 0.019 15.4 8.3 1.5 1 1 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity DUF755 PF05501.11 NODE_34168_length_634_cov_90.833055_g27278_i0reverse_frame_1 - 2.8 8.3 27.7 5.6 7.3 27.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Apt1 PF10351.9 NODE_34168_length_634_cov_90.833055_g27278_i0reverse_frame_1 - 2.9 6.7 11.6 4.1 6.1 11.6 1.2 1 0 0 1 1 1 0 Golgi-body localisation protein domain Ferlin_C PF16165.5 NODE_34168_length_634_cov_90.833055_g27278_i0reverse_frame_1 - 8.6 6.3 7.9 15 5.5 7.9 1.4 1 0 0 1 1 1 0 Ferlin C-terminus UMP1 PF05348.11 NODE_34167_length_634_cov_92.834725_g27277_i0forward_frame_1 - 0.17 12.1 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Proteasome maturation factor UMP1 tRNA-synt_2b PF00587.25 NODE_34151_length_634_cov_254.762938_g27262_i0reverse_frame_1 - 0.065 13.2 0.1 0.28 11.1 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetase class II core domain (G, H, P, S and T) Nucleo_P87 PF07267.11 NODE_34148_length_634_cov_265.888147_g27259_i0reverse_frame_1 - 0.98 8.2 3.4 1.2 7.9 3.4 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 DUF1748 PF08520.10 NODE_34133_length_634_cov_6568.509182_g27247_i0forward_frame_1 - 0.087 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1748) PRD PF00874.20 NODE_34127_length_635_cov_3.178333_g27243_i0reverse_frame_1 - 1.7e-33 114.7 0.7 3.4e-25 88.2 0.0 2.3 2 0 0 2 2 2 2 PRD domain CAT_RBD PF03123.15 NODE_34127_length_635_cov_3.178333_g27243_i0reverse_frame_1 - 6.2e-12 45.3 0.1 1e-11 44.6 0.1 1.3 1 0 0 1 1 1 1 CAT RNA binding domain TTL PF03133.15 NODE_34123_length_635_cov_3.551667_g27239_i0reverse_frame_1 - 5.1e-05 22.6 0.8 8.5e-05 21.8 0.8 1.3 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family DUF1279 PF06916.13 NODE_34114_length_635_cov_84.090000_g27230_i0reverse_frame_1 - 0.33 11.5 2.9 0.8 10.3 2.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1279) IQ PF00612.27 NODE_34100_length_635_cov_164.530000_g27217_i0forward_frame_1 - 8.8e-10 37.5 10.1 0.00013 21.5 0.5 4.9 4 0 0 4 4 4 4 IQ calmodulin-binding motif 3Beta_HSD PF01073.19 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 4.5e-16 58.7 0.0 5.3e-16 58.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 2e-13 50.4 0.2 5.9e-13 48.8 0.2 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 6.4e-07 28.8 0.0 8e-07 28.5 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 3.4e-06 26.4 0.1 0.00012 21.3 0.1 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 1.2e-05 25.3 0.0 3.1e-05 23.9 0.0 1.6 2 0 0 2 2 2 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 0.00019 20.9 0.3 0.00026 20.5 0.3 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase DUF1943 PF09172.11 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 0.19 10.9 8.8 0.28 10.4 8.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Zip PF02535.22 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 0.2 10.8 4.5 0.22 10.7 4.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter BORG_CEP PF14957.6 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 0.56 11.4 7.6 0.92 10.7 7.6 1.4 1 0 0 1 1 1 0 Cdc42 effector Presenilin PF01080.17 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 0.64 8.7 11.1 0.68 8.6 11.1 1.1 1 0 0 1 1 1 0 Presenilin RR_TM4-6 PF06459.12 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 1.1 9.0 15.9 1.4 8.7 15.9 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DDHD PF02862.17 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 1.1 9.4 9.3 1.3 9.2 9.3 1.2 1 0 0 1 1 1 0 DDHD domain ALMT PF11744.8 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 1.3 7.7 16.2 1.7 7.4 16.2 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF3807 PF12720.7 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 2 8.6 22.8 3 8.1 22.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Dsh_C PF12316.8 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 3.3 8.1 4.5 4.7 7.6 4.5 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal DUF2828 PF11443.8 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_1 - 9.6 4.2 18.9 12 3.8 18.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) PROL5-SMR PF15621.6 NODE_34079_length_636_cov_2.484193_g27197_i0forward_frame_1 - 0.066 13.7 0.2 0.12 12.9 0.2 1.3 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family DAHP_synth_1 PF00793.20 NODE_34076_length_636_cov_3.599002_g27194_i0forward_frame_1 - 1e-73 247.6 0.0 1.2e-73 247.4 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family Pept_tRNA_hydro PF01195.19 NODE_34066_length_636_cov_104.376040_g27185_i0forward_frame_1 - 6.6e-34 117.3 0.6 8.2e-34 117.0 0.6 1.2 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase Stm1_N PF09598.10 NODE_34058_length_636_cov_191.765391_g27179_i0reverse_frame_1 - 0.0022 18.8 2.1 0.0022 18.8 2.1 3.2 4 1 0 4 4 4 1 Stm1 NOP5NT PF08156.13 NODE_34036_length_637_cov_3.941860_g27162_i0forward_frame_2 - 3e-10 40.3 0.3 8.2e-10 38.9 0.3 1.7 1 0 0 1 1 1 1 NOP5NT (NUC127) domain DUF1375 PF07119.12 NODE_34011_length_637_cov_214.707641_g27140_i0forward_frame_2 - 0.045 14.2 5.2 1.7 9.1 0.1 3.8 3 1 1 4 4 4 0 Protein of unknown function (DUF1375) DUF1411 PF07199.11 NODE_34008_length_637_cov_294.086379_g27137_i0reverse_frame_3 - 0.024 14.3 0.8 0.32 10.6 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1411) SASA PF03629.18 NODE_34006_length_637_cov_336.953488_g26092_i1forward_frame_3 - 0.12 12.0 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Carbohydrate esterase, sialic acid-specific acetylesterase FGGY_N PF00370.21 NODE_33988_length_638_cov_2.437811_g27124_i0reverse_frame_3 - 9.2e-21 74.5 0.0 1.1e-20 74.2 0.0 1.1 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain BcrAD_BadFG PF01869.20 NODE_33988_length_638_cov_2.437811_g27124_i0reverse_frame_3 - 0.014 14.9 0.1 0.054 13.0 0.1 1.7 1 1 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family Med11 PF10280.9 NODE_33988_length_638_cov_2.437811_g27124_i0forward_frame_3 - 0.14 12.6 0.0 0.2 12.1 0.0 1.2 1 0 0 1 1 1 0 Mediator complex protein TetR_N PF00440.23 NODE_33987_length_638_cov_3.003317_g27123_i0reverse_frame_3 - 0.0011 18.7 0.0 0.0018 18.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family NiFe_hyd_SSU_C PF14720.6 NODE_33985_length_638_cov_3.792703_g27121_i0reverse_frame_3 - 2.8e-32 110.9 4.9 5.7e-32 109.9 4.9 1.5 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal Oxidored_q6 PF01058.22 NODE_33985_length_638_cov_3.792703_g27121_i0reverse_frame_3 - 4.2e-20 71.9 0.3 5.9e-20 71.4 0.3 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1664 PF07889.12 NODE_33980_length_638_cov_54.353234_g27116_i0reverse_frame_2 - 1.2 9.1 14.3 2 8.5 13.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) YtxH PF12732.7 NODE_33980_length_638_cov_54.353234_g27116_i0reverse_frame_2 - 2 9.0 8.2 49 4.5 8.2 2.6 1 1 0 1 1 1 0 YtxH-like protein DUF4407 PF14362.6 NODE_33980_length_638_cov_54.353234_g27116_i0reverse_frame_2 - 2.7 7.2 16.2 4.2 6.6 16.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF848 PF05852.11 NODE_33980_length_638_cov_54.353234_g27116_i0reverse_frame_2 - 3.7 7.6 19.6 0.65 10.1 15.9 1.6 2 0 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) GHD PF17834.1 NODE_33975_length_638_cov_74.880597_g27111_i0forward_frame_2 - 0.43 10.7 3.6 0.38 10.8 1.0 2.1 2 0 0 2 2 2 0 Beta-sandwich domain in beta galactosidase DUF4407 PF14362.6 NODE_33967_length_638_cov_95.963516_g27103_i0forward_frame_3 - 0.02 14.2 7.5 0.03 13.7 7.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HAP1_N PF04849.13 NODE_33967_length_638_cov_95.963516_g27103_i0forward_frame_3 - 0.068 12.4 25.5 0.01 15.1 20.7 1.8 1 1 1 2 2 2 0 HAP1 N-terminal conserved region Phage_HK97_TLTM PF06120.11 NODE_33967_length_638_cov_95.963516_g27103_i0forward_frame_3 - 0.32 10.1 12.1 0.28 10.4 10.3 1.5 1 1 0 1 1 1 0 Tail length tape measure protein DUF2316 PF10078.9 NODE_33967_length_638_cov_95.963516_g27103_i0forward_frame_3 - 0.53 10.5 8.2 0.11 12.8 1.2 2.3 1 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2316) YabA PF06156.13 NODE_33967_length_638_cov_95.963516_g27103_i0forward_frame_3 - 0.65 10.7 17.5 1.2 9.8 1.3 3.3 2 1 1 3 3 3 0 Initiation control protein YabA FlaC_arch PF05377.11 NODE_33967_length_638_cov_95.963516_g27103_i0forward_frame_3 - 0.98 9.9 11.5 3.2 8.2 1.1 3.3 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) KASH_CCD PF14662.6 NODE_33967_length_638_cov_95.963516_g27103_i0forward_frame_3 - 1.2 9.0 25.4 5.6 6.8 16.7 2.8 2 1 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Iron_permease PF04120.12 NODE_33967_length_638_cov_95.963516_g27103_i0forward_frame_3 - 2.6 7.9 5.5 2.3 8.0 4.1 1.6 1 1 0 1 1 1 0 Low affinity iron permease LMBR1 PF04791.16 NODE_33967_length_638_cov_95.963516_g27103_i0forward_frame_3 - 3.7 6.3 8.2 4.5 6.1 8.2 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein ALMT PF11744.8 NODE_33966_length_638_cov_97.477612_g27102_i0forward_frame_2 - 0.064 12.1 2.8 0.075 11.8 2.8 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Cdd1 PF11731.8 NODE_33966_length_638_cov_97.477612_g27102_i0forward_frame_2 - 0.15 12.3 0.0 0.32 11.2 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus zf-RanBP PF00641.18 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 7.5e-12 44.4 19.3 6.8e-07 28.5 2.0 3.0 3 0 0 3 3 3 2 Zn-finger in Ran binding protein and others zf-AN1 PF01428.16 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 6.9e-09 35.7 5.2 6.9e-09 35.7 5.2 3.4 3 0 0 3 3 3 1 AN1-like Zinc finger DZR PF12773.7 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 0.0028 17.6 8.3 0.0028 17.6 8.3 3.2 2 1 1 3 3 3 2 Double zinc ribbon Transp_Tc5_C PF04236.15 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 0.0068 16.7 3.8 0.0068 16.7 3.8 2.5 3 1 0 3 3 3 1 Tc5 transposase C-terminal domain IBR PF01485.21 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 0.036 14.3 4.6 0.036 14.3 4.6 3.1 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain zinc_ribbon_2 PF13240.6 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 0.33 10.7 11.6 1.1 9.0 0.8 3.6 3 0 0 3 3 3 0 zinc-ribbon domain Asp_Arg_Hydrox PF05118.15 NODE_33943_length_638_cov_326.044776_g27079_i0forward_frame_3 - 0.078 12.8 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase CENP-L PF13092.6 NODE_33943_length_638_cov_326.044776_g27079_i0forward_frame_2 - 0.028 14.6 0.5 0.041 14.1 0.5 1.2 1 0 0 1 1 1 0 Kinetochore complex Sim4 subunit Fta1 KORA PF16509.5 NODE_33936_length_638_cov_1219.936982_g26956_i1reverse_frame_3 - 0.045 14.0 0.4 0.083 13.2 0.4 1.4 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor Ank_2 PF12796.7 NODE_33936_length_638_cov_1219.936982_g26956_i1reverse_frame_2 - 5.6e-28 97.3 0.1 6.8e-12 45.8 0.1 2.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_33936_length_638_cov_1219.936982_g26956_i1reverse_frame_2 - 3.5e-21 75.3 1.3 4.9e-09 36.5 0.1 3.7 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_33936_length_638_cov_1219.936982_g26956_i1reverse_frame_2 - 9.6e-21 73.6 0.1 1.2e-07 31.9 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_33936_length_638_cov_1219.936982_g26956_i1reverse_frame_2 - 3.4e-14 51.6 0.1 0.0006 20.1 0.0 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 NODE_33936_length_638_cov_1219.936982_g26956_i1reverse_frame_2 - 2e-12 46.9 1.0 0.00024 21.4 0.1 3.5 3 0 0 3 3 3 2 Ankyrin repeat zf-CGNR PF11706.8 NODE_33928_length_639_cov_2.627483_g27066_i0reverse_frame_3 - 0.02 14.7 0.2 0.073 12.9 0.2 2.0 1 0 0 1 1 1 0 CGNR zinc finger TetR_C_30 PF17939.1 NODE_33924_length_639_cov_4.647351_g27062_i0reverse_frame_2 - 0.16 12.2 0.0 0.27 11.5 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain WPP PF13943.6 NODE_33923_length_639_cov_51.610927_g27061_i0reverse_frame_3 - 0.042 14.2 1.2 0.074 13.5 0.4 1.8 2 0 0 2 2 2 0 WPP domain Nucleopor_Nup85 PF07575.13 NODE_33920_length_639_cov_62.344371_g27058_i0reverse_frame_2 - 0.19 10.3 0.1 0.21 10.1 0.1 1.0 1 0 0 1 1 1 0 Nup85 Nucleoporin HAD_2 PF13419.6 NODE_33920_length_639_cov_62.344371_g27058_i0forward_frame_3 - 6.4e-09 36.1 0.1 1.8e-08 34.6 0.0 1.6 1 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Acid_PPase PF12689.7 NODE_33920_length_639_cov_62.344371_g27058_i0forward_frame_3 - 1.3e-05 25.1 0.2 2.1e-05 24.4 0.2 1.3 1 0 0 1 1 1 1 Acid Phosphatase DUF2608 PF11019.8 NODE_33920_length_639_cov_62.344371_g27058_i0forward_frame_3 - 6.7e-05 22.5 0.4 0.0001 21.9 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2608) Hydrolase PF00702.26 NODE_33920_length_639_cov_62.344371_g27058_i0forward_frame_3 - 0.0049 17.2 0.2 0.016 15.5 0.1 1.7 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase PKcGMP_CC PF16808.5 NODE_33920_length_639_cov_62.344371_g27058_i0forward_frame_3 - 0.034 14.0 3.0 0.069 13.0 3.0 1.5 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase AdoMet_dc PF02675.15 NODE_33917_length_639_cov_86.157285_g27056_i0forward_frame_2 - 1.4e-05 25.3 0.0 2.1e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase zf-4CXXC_R1 PF10497.9 NODE_33917_length_639_cov_86.157285_g27056_i0forward_frame_2 - 0.17 12.1 0.1 0.17 12.1 0.1 1.9 2 0 0 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 DUF2878 PF11086.8 ORF9936 - 4.6e-23 82.1 11.6 5.8e-23 81.8 11.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2878) PCI PF01399.27 ORF99272 - 1.7e-08 34.9 0.0 2.8e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 PCI domain Nic96 PF04097.14 ORF99272 - 0.01 14.4 0.2 0.099 11.1 0.0 1.9 2 0 0 2 2 2 1 Nup93/Nic96 DUF3461 PF11944.8 ORF99272 - 0.044 13.9 2.7 0.27 11.4 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3461) Sec8_exocyst PF04048.14 ORF99272 - 0.35 10.8 4.9 1.1 9.2 4.8 1.8 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain p450 PF00067.22 ORF989 - 2.6e-39 135.2 0.0 3.1e-39 135.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 XPC-binding PF09280.11 ORF989 - 0.13 12.0 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 XPC-binding domain Ank_4 PF13637.6 ORF97428 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF97428 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF97428 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF97428 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF97428 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF97428 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain EF-hand_6 PF13405.6 ORF96951 - 1.1e-11 43.6 5.6 6.7e-06 25.6 0.1 3.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF96951 - 1.5e-10 39.8 7.6 0.00015 21.1 0.3 3.6 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF96951 - 1.8e-08 34.7 6.9 0.00012 22.5 2.0 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF96951 - 0.00016 21.0 4.3 0.045 13.3 0.2 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF96951 - 0.00027 20.7 7.3 0.12 12.2 0.3 3.4 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF96951 - 0.021 14.7 3.1 0.5 10.4 0.1 2.7 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF96951 - 0.068 13.5 0.6 3 8.2 0.0 2.6 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region NUC PF18510.1 ORF96951 - 0.37 11.2 5.8 1.4 9.3 5.8 1.9 1 1 0 1 1 1 0 Nuclease domain DUF812 PF05667.11 ORF9434 - 0.00011 21.2 0.8 0.00013 21.1 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) THOC7 PF05615.13 ORF9434 - 0.00034 20.9 0.1 0.00042 20.6 0.1 1.2 1 0 0 1 1 1 1 Tho complex subunit 7 Spectrin PF00435.21 ORF9434 - 0.00046 20.6 1.1 0.00046 20.6 1.1 1.5 2 0 0 2 2 1 1 Spectrin repeat UPF0242 PF06785.11 ORF9434 - 0.00058 20.0 1.3 0.00085 19.5 1.3 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus NRBF2 PF08961.10 ORF9434 - 0.00059 19.5 2.2 0.0008 19.1 2.2 1.2 1 0 0 1 1 1 1 Nuclear receptor-binding factor 2, autophagy regulator DUF3450 PF11932.8 ORF9434 - 0.00073 18.9 0.6 0.0027 17.0 1.3 1.5 2 0 0 2 2 1 1 Protein of unknown function (DUF3450) HOOK PF05622.12 ORF9434 - 0.00074 17.8 1.2 0.00093 17.5 1.2 1.1 1 0 0 1 1 1 1 HOOK protein GAS PF13851.6 ORF9434 - 0.00075 18.9 0.9 0.0011 18.4 0.9 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding Filament PF00038.21 ORF9434 - 0.0012 18.6 1.4 0.0016 18.1 1.4 1.1 1 0 0 1 1 1 1 Intermediate filament protein bZIP_2 PF07716.15 ORF9434 - 0.0017 18.4 0.4 0.0017 18.4 0.4 2.0 1 1 1 2 2 2 1 Basic region leucine zipper Occludin_ELL PF07303.13 ORF9434 - 0.0029 18.3 1.1 0.005 17.6 1.1 1.3 1 0 0 1 1 1 1 Occludin homology domain Uso1_p115_C PF04871.13 ORF9434 - 0.0035 17.7 7.8 0.0075 16.6 7.8 1.5 1 0 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, C terminal region Mod_r PF07200.13 ORF9434 - 0.0055 16.8 4.9 0.0091 16.1 4.9 1.3 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein YabA PF06156.13 ORF9434 - 0.0056 17.3 2.8 0.0093 16.6 2.8 1.4 1 0 0 1 1 1 1 Initiation control protein YabA Fungal_TACC PF12709.7 ORF9434 - 0.0064 16.9 7.0 0.046 14.2 1.3 2.5 1 1 1 2 2 2 1 Fungal Transforming acidic coiled-coil (TACC) proteins Cast PF10174.9 ORF9434 - 0.0075 14.6 3.8 0.0097 14.2 3.8 1.1 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone Atg14 PF10186.9 ORF9434 - 0.0082 15.3 0.7 0.012 14.7 0.7 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF9434 - 0.0093 16.5 5.3 0.017 15.7 5.3 1.4 1 0 0 1 1 1 1 Apg6 coiled-coil region DUF641 PF04859.12 ORF9434 - 0.0096 16.3 0.6 0.017 15.5 0.6 1.3 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) FlaC_arch PF05377.11 ORF9434 - 0.0097 16.3 2.7 0.015 15.6 1.3 2.1 1 1 0 1 1 1 1 Flagella accessory protein C (FlaC) ADIP PF11559.8 ORF9434 - 0.012 15.8 5.9 0.018 15.1 5.9 1.2 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding PspA_IM30 PF04012.12 ORF9434 - 0.012 15.2 1.5 0.019 14.6 1.5 1.2 1 0 0 1 1 1 0 PspA/IM30 family bZIP_1 PF00170.21 ORF9434 - 0.013 15.6 5.4 0.015 15.4 2.9 2.1 1 1 1 2 2 2 0 bZIP transcription factor ATG16 PF08614.11 ORF9434 - 0.014 15.6 5.4 0.022 15.0 5.4 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF1640 PF07798.11 ORF9434 - 0.016 15.2 1.7 0.019 15.0 0.8 1.5 2 0 0 2 2 1 0 Protein of unknown function (DUF1640) IFP_35_N PF07334.13 ORF9434 - 0.017 15.2 0.9 0.017 15.2 0.9 2.2 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Spc7 PF08317.11 ORF9434 - 0.017 14.0 4.1 0.023 13.6 4.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein GIT_CC PF16559.5 ORF9434 - 0.018 14.9 3.5 0.022 14.6 1.3 2.0 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor HMMR_N PF15905.5 ORF9434 - 0.018 14.5 4.5 0.026 14.0 4.5 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Cluap1 PF10234.9 ORF9434 - 0.018 14.4 1.5 0.026 13.9 1.5 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 DUF4407 PF14362.6 ORF9434 - 0.019 14.4 1.1 0.023 14.1 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) V_ATPase_I PF01496.19 ORF9434 - 0.026 12.5 0.2 0.03 12.3 0.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HIP1_clath_bdg PF16515.5 ORF9434 - 0.028 15.0 5.9 0.059 14.0 5.4 1.7 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Macoilin PF09726.9 ORF9434 - 0.028 13.0 0.1 0.032 12.8 0.1 1.1 1 0 0 1 1 1 0 Macoilin family AAA_13 PF13166.6 ORF9434 - 0.03 13.0 1.6 0.041 12.5 1.6 1.1 1 0 0 1 1 1 0 AAA domain Cnn_1N PF07989.11 ORF9434 - 0.033 14.4 2.3 0.033 14.4 2.3 2.3 1 1 2 3 3 3 0 Centrosomin N-terminal motif 1 DUF5082 PF16888.5 ORF9434 - 0.035 14.4 4.6 0.091 13.0 4.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) DHR10 PF18595.1 ORF9434 - 0.045 13.8 4.3 0.088 12.9 4.3 1.4 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain DUF1664 PF07889.12 ORF9434 - 0.045 13.8 0.5 0.078 13.0 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 ORF9434 - 0.051 13.7 5.2 0.61 10.2 3.7 2.6 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 Golgin_A5 PF09787.9 ORF9434 - 0.065 12.7 3.8 0.093 12.2 3.8 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 Phlebovirus_NSM PF07246.11 ORF9434 - 0.065 12.6 0.7 0.095 12.1 0.7 1.1 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M HAUS6_N PF14661.6 ORF9434 - 0.068 12.8 0.6 0.11 12.1 0.6 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus KLRAQ PF10205.9 ORF9434 - 0.082 13.1 3.7 0.13 12.5 3.7 1.3 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein Phage_GP20 PF06810.11 ORF9434 - 0.1 12.4 7.5 0.16 11.8 7.5 1.4 1 0 0 1 1 1 0 Phage minor structural protein GP20 Prominin PF05478.11 ORF9434 - 0.1 10.5 0.5 0.13 10.2 0.5 1.1 1 0 0 1 1 1 0 Prominin DUF1465 PF07323.12 ORF9434 - 0.11 12.4 2.6 0.17 11.7 2.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Sec34 PF04136.15 ORF9434 - 0.11 12.3 3.4 0.18 11.7 3.4 1.2 1 0 0 1 1 1 0 Sec34-like family ZapB PF06005.12 ORF9434 - 0.12 12.9 9.5 0.1 13.1 5.5 2.3 1 1 1 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 ORF9434 - 0.13 12.1 5.8 0.32 10.8 4.3 2.4 2 1 0 2 2 1 0 Septum formation initiator ApoO PF09769.9 ORF9434 - 0.14 12.1 0.3 0.25 11.3 0.3 1.4 1 0 0 1 1 1 0 Apolipoprotein O Prefoldin PF02996.17 ORF9434 - 0.15 12.0 5.2 0.089 12.7 1.4 2.0 1 1 1 2 2 2 0 Prefoldin subunit Gly-rich_Ago1 PF12764.7 ORF9434 - 0.16 12.8 3.2 0.27 12.0 3.2 1.4 1 0 0 1 1 1 0 Glycine-rich region of argonaut CtIP_N PF10482.9 ORF9434 - 0.17 11.9 2.7 0.34 11.0 2.7 1.5 1 0 0 1 1 1 0 Tumour-suppressor protein CtIP N-terminal domain DUF4094 PF13334.6 ORF9434 - 0.2 12.1 4.8 0.93 10.0 4.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) Tup_N PF08581.10 ORF9434 - 0.21 11.9 5.1 0.44 10.9 5.1 1.5 1 0 0 1 1 1 0 Tup N-terminal Spc24 PF08286.11 ORF9434 - 0.21 11.8 9.4 0.67 10.2 5.8 2.6 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Muted PF14942.6 ORF9434 - 0.22 11.8 4.1 0.37 11.1 4.1 1.2 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein AKNA PF12443.8 ORF9434 - 0.3 11.8 7.0 0.64 10.7 0.8 2.4 1 1 1 2 2 2 0 AT-hook-containing transcription factor DUF16 PF01519.16 ORF9434 - 0.36 11.4 4.9 0.62 10.6 4.9 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF16 TSC22 PF01166.18 ORF9434 - 0.4 11.0 4.6 0.16 12.3 2.0 1.7 2 0 0 2 2 1 0 TSC-22/dip/bun family Snapin_Pallidin PF14712.6 ORF9434 - 0.41 11.1 4.1 0.48 10.9 2.7 1.8 1 1 1 2 2 2 0 Snapin/Pallidin OmpH PF03938.14 ORF9434 - 0.43 10.9 8.6 0.83 10.0 8.6 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) TMPIT PF07851.13 ORF9434 - 0.51 9.5 3.4 0.68 9.1 3.4 1.1 1 0 0 1 1 1 0 TMPIT-like protein JIP_LZII PF16471.5 ORF9434 - 0.52 10.5 4.5 0.59 10.3 1.2 2.4 1 1 0 2 2 2 0 JNK-interacting protein leucine zipper II Tho2 PF11262.8 ORF9434 - 0.53 9.4 3.0 0.71 9.0 3.0 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 HALZ PF02183.18 ORF9434 - 0.89 9.8 4.9 0.51 10.6 0.7 2.4 1 1 1 2 2 2 0 Homeobox associated leucine zipper BST2 PF16716.5 ORF9434 - 2 9.1 9.0 0.13 12.8 3.7 1.8 2 0 0 2 2 1 0 Bone marrow stromal antigen 2 Swi5 PF07061.11 ORF9434 - 2.1 8.5 6.8 10 6.3 3.9 2.3 1 1 1 2 2 2 0 Swi5 DUF3073 PF11273.8 ORF9434 - 7.1 7.5 7.8 27 5.6 0.4 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3073) EF-hand_6 PF13405.6 ORF93769 - 1.1e-11 43.6 5.6 6.7e-06 25.6 0.1 3.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF93769 - 1.5e-10 39.8 7.6 0.00015 21.1 0.3 3.6 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF93769 - 1.8e-08 34.7 6.9 0.00012 22.5 2.0 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF93769 - 0.00016 21.0 4.3 0.045 13.3 0.2 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF93769 - 0.00027 20.7 7.3 0.12 12.2 0.3 3.4 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF93769 - 0.021 14.7 3.1 0.5 10.4 0.1 2.7 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF93769 - 0.068 13.5 0.6 3 8.2 0.0 2.6 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region NUC PF18510.1 ORF93769 - 0.37 11.2 5.8 1.4 9.3 5.8 1.9 1 1 0 1 1 1 0 Nuclease domain Ycf4 PF02392.16 ORF93264 - 3.6e-26 91.8 0.1 4.7e-26 91.4 0.1 1.1 1 0 0 1 1 1 1 Ycf4 DUF3921 PF13060.6 ORF92493 - 0.031 14.3 0.2 0.06 13.4 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3921) Pro_isomerase PF00160.21 ORF92475 - 2.2e-31 109.3 0.0 3.2e-31 108.7 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GST_N PF02798.20 ORF91442 - 1e-22 80.3 0.0 6.1e-20 71.4 0.0 2.2 2 0 0 2 2 2 2 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF91442 - 8.2e-17 61.4 0.0 1.6e-16 60.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF91442 - 1.2e-13 51.0 0.0 1.8e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF91442 - 3e-13 49.8 0.1 6.3e-13 48.8 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF91442 - 6.4e-08 32.5 0.0 1.2e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF91442 - 0.02 15.5 0.0 0.047 14.3 0.0 1.6 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF91442 - 0.021 15.0 0.0 0.046 13.9 0.0 1.6 1 0 0 1 1 1 0 Glutaredoxin GST_C_6 PF17171.4 ORF91442 - 0.096 12.5 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Ank_4 PF13637.6 ORF87578 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF87578 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF87578 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF87578 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF87578 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF87578 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain DUF1190 PF06693.11 ORF85865 - 8.5e-20 71.8 2.4 1.6e-19 70.8 2.4 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1190) Chloroa_b-bind PF00504.21 ORF85221 - 1.7e-25 90.4 0.8 2.2e-25 90.0 0.8 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein VSP PF03302.13 ORF84826 - 0.0035 16.3 5.2 0.0044 15.9 5.2 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein cEGF PF12662.7 ORF84826 - 0.0096 15.8 2.9 0.021 14.8 2.9 1.5 1 0 0 1 1 1 1 Complement Clr-like EGF-like DUF3687 PF12459.8 ORF84826 - 0.29 10.7 7.1 1.9 8.1 0.8 2.8 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein PolC_DP2 PF03833.13 ORF84826 - 1.6 6.5 4.5 2 6.2 4.5 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 FXa_inhibition PF14670.6 ORF84826 - 2.3 8.6 11.5 4 7.8 11.5 1.4 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site DUF4169 PF13770.6 ORF83999 - 0.031 14.6 0.6 0.045 14.0 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4169) DUF3810 PF12725.7 ORF83999 - 0.75 9.1 8.8 1.3 8.3 8.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) Mito_carr PF00153.27 ORF81531 - 6.3e-17 61.3 0.1 1.7e-11 43.8 0.0 2.4 2 0 0 2 2 2 2 Mitochondrial carrier protein ABC_tran PF00005.27 ORF80975 - 1.7e-26 93.4 0.1 2.3e-26 92.9 0.1 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF80975 - 3.2e-09 36.6 0.7 2.2e-07 30.6 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF80975 - 0.00085 19.4 0.4 0.0018 18.3 0.4 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA PF00004.29 ORF80975 - 0.002 18.5 0.8 0.18 12.2 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 ORF80975 - 0.013 14.8 0.4 0.05 12.9 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin RNA_helicase PF00910.22 ORF80975 - 0.018 15.4 0.1 0.26 11.7 0.0 2.3 2 0 0 2 2 2 0 RNA helicase FKBP_N_2 PF18023.1 ORF80975 - 0.034 14.2 0.4 0.069 13.3 0.4 1.6 1 0 0 1 1 1 0 BDBT FKBP like N-terminal AAA_18 PF13238.6 ORF80975 - 0.039 14.5 0.8 0.097 13.2 0.8 1.9 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF80975 - 0.042 13.6 0.4 0.11 12.3 0.1 1.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein DUF87 PF01935.17 ORF80975 - 0.048 13.8 0.7 0.13 12.3 0.1 1.9 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_30 PF13604.6 ORF80975 - 0.061 13.0 0.1 0.21 11.3 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF80975 - 0.064 13.0 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain DDRGK PF09756.9 ORF80975 - 0.082 12.5 1.0 0.12 12.0 1.0 1.2 1 0 0 1 1 1 0 DDRGK domain NB-ARC PF00931.22 ORF80975 - 0.083 12.1 0.9 4 6.5 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain CbiA PF01656.23 ORF80975 - 0.087 12.9 0.1 0.14 12.2 0.1 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 ORF80975 - 0.16 12.3 1.0 0.52 10.6 1.0 2.0 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF80975 - 0.24 11.1 3.7 3.7 7.3 0.2 2.5 1 1 2 3 3 3 0 IstB-like ATP binding protein NTPase_1 PF03266.15 ORF80975 - 0.56 10.1 3.7 0.91 9.4 0.1 2.3 2 1 0 2 2 2 0 NTPase Kelch_4 PF13418.6 ORF80503 - 3e-08 33.5 0.0 2.7e-05 24.1 0.0 2.3 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF80503 - 6.3e-05 22.5 0.0 0.33 10.6 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF80503 - 0.0053 17.0 0.0 1.6 9.1 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Adaptin_binding PF10199.9 ORF80503 - 0.0092 16.6 3.4 0.012 16.2 3.4 1.3 1 0 0 1 1 1 1 Alpha and gamma adaptin binding protein p34 Kelch_5 PF13854.6 ORF80503 - 0.071 13.1 0.0 9.5 6.3 0.0 2.3 2 0 0 2 2 2 0 Kelch motif Aldolase_II PF00596.21 ORF8004 - 1.6e-44 152.1 0.0 1.8e-44 151.9 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Chloroa_b-bind PF00504.21 ORF79664 - 1.7e-25 90.4 0.8 2.2e-25 90.0 0.8 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein RRM_2 PF04059.12 ORF75774 - 7.3e-21 74.2 0.0 1e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif 2 La_HTH_kDCL PF18177.1 ORF75774 - 0.037 14.3 0.0 0.069 13.4 0.0 1.4 1 0 0 1 1 1 0 La HTH in kinetoplastid DICER domain Paramyxo_P_V_N PF13825.6 ORF75774 - 0.17 11.3 0.1 0.24 10.8 0.1 1.1 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus PPTA PF01239.22 ORF75015 - 6.7e-16 57.4 17.9 3.7e-07 29.7 0.2 3.7 4 0 0 4 4 4 3 Protein prenyltransferase alpha subunit repeat TPR_7 PF13176.6 ORF75015 - 0.012 15.6 0.5 0.027 14.5 0.5 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF75015 - 0.089 12.9 0.7 0.089 12.9 0.7 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat SRI PF08236.11 ORF7420 - 0.067 13.4 7.3 0.075 13.2 0.1 2.5 2 0 0 2 2 2 0 SRI (Set2 Rpb1 interacting) domain DUF4441 PF14536.6 ORF7420 - 3.6 7.8 15.5 70 3.6 15.5 2.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) VPR PF00522.18 ORF72420 - 0.0016 18.4 0.2 0.0048 16.9 0.0 1.7 2 0 0 2 2 2 1 VPR/VPX protein Ank_4 PF13637.6 ORF7218 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF7218 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF7218 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF7218 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF7218 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF7218 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Glyco_hydro_7 PF00840.20 ORF70199 - 1.7e-06 27.0 18.7 0.0038 16.0 0.6 3.2 1 1 2 3 3 3 3 Glycosyl hydrolase family 7 DUF3126 PF11324.8 ORF70003 - 0.0025 17.6 0.1 0.006 16.4 0.1 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3126) BACK PF07707.15 ORF69227 - 3.8e-07 30.1 0.3 6.2e-07 29.5 0.3 1.5 1 0 0 1 1 1 1 BTB And C-terminal Kelch Tn7_Tnp_TnsA_C PF08721.11 ORF69227 - 0.13 12.9 1.5 2.4 8.9 0.4 2.4 2 0 0 2 2 2 0 TnsA endonuclease C terminal Piwi PF02171.17 ORF67865 - 1.3e-38 133.0 0.0 1.5e-38 132.8 0.0 1.0 1 0 0 1 1 1 1 Piwi domain Methyltransf_11 PF08241.12 ORF67784 - 3.6e-17 62.8 0.0 5.3e-17 62.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF67784 - 2e-16 60.5 0.0 4e-16 59.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF67784 - 1.2e-13 51.1 0.0 1.4e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF67784 - 5.9e-11 42.5 0.0 7.7e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF67784 - 1.5e-08 35.3 0.0 2.3e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF67784 - 1.1e-05 24.9 0.0 2e-05 24.0 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family TPMT PF05724.11 ORF67784 - 0.0017 18.1 0.0 0.0026 17.4 0.0 1.3 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) TehB PF03848.14 ORF67784 - 0.0092 15.4 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 ORF67784 - 0.013 15.0 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF67784 - 0.057 13.4 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 ORF67784 - 0.059 12.7 0.0 0.078 12.2 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MetW PF07021.12 ORF67784 - 0.12 12.0 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW zf-C4H2 PF10146.9 ORF6694 - 0.042 14.2 4.1 0.051 13.9 4.1 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein Arc_PepC_II PF06847.11 ORF6694 - 0.33 11.5 2.0 1.7 9.3 0.2 2.4 2 0 0 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II Formyl_trans_N PF00551.19 ORF65218 - 2.6e-68 229.3 0.0 3e-68 229.1 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase Synapsin PF02078.16 ORF64943 - 0.12 12.6 0.0 0.2 12.0 0.0 1.3 1 0 0 1 1 1 0 Synapsin, N-terminal domain DUF612 PF04747.12 ORF64943 - 0.16 11.1 9.5 0.015 14.5 5.2 1.4 2 0 0 2 2 2 0 Protein of unknown function, DUF612 DUF4446 PF14584.6 ORF64849 - 0.55 10.2 4.1 0.29 11.1 0.7 2.0 1 1 2 3 3 3 0 Protein of unknown function (DUF4446) Phytochelatin_C PF09328.10 ORF64563 - 0.021 14.1 0.1 0.027 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) DUF612 PF04747.12 ORF6409 - 0.076 12.1 8.7 0.015 14.5 5.2 1.5 2 0 0 2 2 2 0 Protein of unknown function, DUF612 Synapsin PF02078.16 ORF6409 - 0.12 12.6 0.0 0.2 12.0 0.0 1.3 1 0 0 1 1 1 0 Synapsin, N-terminal domain Ependymin PF00811.18 ORF63431 - 0.014 15.6 0.0 0.026 14.8 0.0 1.6 1 0 0 1 1 1 0 Ependymin NCBP3 PF10309.9 ORF63431 - 0.15 11.9 1.7 2 8.4 0.1 2.4 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 DUF3150 PF11348.8 ORF63431 - 0.17 11.1 0.0 0.27 10.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) CDC37_M PF08565.11 ORF61038 - 0.019 14.8 0.4 0.044 13.7 0.4 1.6 1 0 0 1 1 1 0 Cdc37 Hsp90 binding domain Syntaxin-6_N PF09177.11 ORF60618 - 0.00095 19.7 0.9 0.00095 19.7 0.9 2.1 2 0 0 2 2 2 1 Syntaxin 6, N-terminal SNARE PF05739.19 ORF60618 - 0.17 11.9 1.9 0.59 10.2 0.5 2.5 2 0 0 2 2 2 0 SNARE domain DUF5320 PF17253.2 ORF60618 - 1 10.5 4.4 9.8 7.3 0.3 2.9 2 2 1 3 3 3 0 Family of unknown function (DUF5320) zf-RING_2 PF13639.6 ORF59528 - 4.8e-13 49.2 13.5 4.8e-13 49.2 13.5 2.3 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF59528 - 2.4e-09 37.3 11.0 2.4e-09 37.3 11.0 1.9 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF59528 - 1.3e-08 34.6 14.1 3.6e-08 33.1 14.1 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF59528 - 9e-07 28.9 6.9 2.2e-06 27.6 6.9 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 ORF59528 - 1.2e-06 28.2 9.8 1.2e-06 28.2 9.8 2.5 2 0 0 2 2 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF59528 - 1.3e-06 28.4 10.3 1.3e-06 28.4 10.3 2.0 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF59528 - 2.4e-06 27.4 11.9 2.4e-06 27.4 11.9 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF59528 - 3e-06 27.0 8.4 3e-06 27.0 8.4 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF59528 - 5.2e-06 26.2 14.3 5.2e-06 26.2 14.3 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF59528 - 1.6e-05 24.6 13.5 0.00036 20.3 13.4 2.4 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF59528 - 0.013 15.1 10.7 0.013 15.1 10.7 2.2 2 1 1 3 3 3 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF59528 - 0.12 12.6 13.9 0.085 13.0 10.5 2.5 2 1 0 2 2 2 0 FANCL C-terminal domain zf-Nse PF11789.8 ORF59528 - 0.15 11.9 8.6 0.27 11.1 8.6 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING-like PF08746.11 ORF59528 - 3.2 8.2 16.5 0.98 9.8 12.0 2.4 2 1 1 3 3 2 0 RING-like domain Cupin_8 PF13621.6 ORF59099 - 4.8e-36 124.8 0.0 5.7e-36 124.5 0.0 1.0 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF59099 - 5.2e-06 26.1 0.0 7.4e-05 22.4 0.0 2.0 1 1 0 1 1 1 1 Cupin superfamily protein Cupin_2 PF07883.11 ORF59099 - 0.079 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Cupin domain Cupin_1 PF00190.22 ORF59099 - 0.097 12.3 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Cupin Ank_4 PF13637.6 ORF58447 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF58447 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF58447 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF58447 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF58447 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF58447 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Ank_4 PF13637.6 ORF55458 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF55458 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF55458 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF55458 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF55458 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF55458 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain ADK PF00406.22 ORF50701 - 1.2e-44 152.1 0.2 1.5e-44 151.8 0.2 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF50701 - 4.6e-32 111.3 0.4 6.1e-32 110.9 0.4 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF50701 - 3.1e-09 37.5 0.2 4.4e-09 37.0 0.2 1.2 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF50701 - 5.1e-05 23.0 2.8 0.0063 16.2 1.5 2.2 2 0 0 2 2 2 2 Thymidylate kinase AAA_33 PF13671.6 ORF50701 - 0.0001 22.5 0.0 0.00029 21.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain Sigma70_ner PF04546.13 ORF50701 - 0.026 14.4 4.4 0.26 11.1 0.2 2.2 1 1 1 2 2 2 0 Sigma-70, non-essential region AAA_19 PF13245.6 ORF50701 - 0.11 12.8 0.3 0.34 11.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 ORF50701 - 0.16 12.4 1.6 0.57 10.6 1.6 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DAO PF01266.24 ORF50290 - 2.8e-18 66.7 0.0 3.1e-18 66.5 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 ORF50290 - 2.1e-05 23.9 0.0 3.4e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 ORF50290 - 0.00068 19.0 0.1 0.0062 15.8 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF50290 - 0.0016 18.6 0.0 0.0028 17.9 0.0 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 ORF50290 - 0.0036 16.4 0.1 0.0054 15.9 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF50290 - 0.033 13.4 0.0 0.19 10.9 0.0 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 ORF50290 - 0.038 13.6 0.0 0.052 13.1 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_oxidored PF12831.7 ORF50290 - 0.039 13.3 0.0 0.05 12.9 0.0 1.5 1 1 0 1 1 1 0 FAD dependent oxidoreductase HI0933_like PF03486.14 ORF50290 - 0.043 12.5 0.1 0.14 10.8 0.0 1.8 2 0 0 2 2 2 0 HI0933-like protein GIDA PF01134.22 ORF50290 - 0.083 12.0 0.4 0.18 10.8 0.1 1.7 2 0 0 2 2 2 0 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 ORF50290 - 0.11 11.8 0.1 0.18 11.1 0.0 1.6 2 1 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 ORF50290 - 0.14 12.0 0.7 0.85 9.5 0.1 2.2 2 1 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 ORF50290 - 0.14 11.1 0.7 1.6 7.7 0.1 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein EF-hand_6 PF13405.6 ORF49987 - 1.1e-11 43.6 5.6 6.7e-06 25.6 0.1 3.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF49987 - 1.5e-10 39.8 7.6 0.00015 21.1 0.3 3.6 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF49987 - 1.8e-08 34.7 6.9 0.00012 22.5 2.0 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF49987 - 0.00016 21.0 4.3 0.045 13.3 0.2 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF49987 - 0.00027 20.7 7.3 0.12 12.2 0.3 3.4 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF49987 - 0.021 14.7 3.1 0.5 10.4 0.1 2.7 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF49987 - 0.068 13.5 0.6 3 8.2 0.0 2.6 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region NUC PF18510.1 ORF49987 - 0.37 11.2 5.8 1.4 9.3 5.8 1.9 1 1 0 1 1 1 0 Nuclease domain EF-hand_6 PF13405.6 ORF49582 - 1.1e-11 43.6 5.6 6.7e-06 25.6 0.1 3.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF49582 - 1.5e-10 39.8 7.6 0.00015 21.1 0.3 3.6 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF49582 - 1.8e-08 34.7 6.9 0.00012 22.5 2.0 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF49582 - 0.00016 21.0 4.3 0.045 13.3 0.2 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF49582 - 0.00027 20.7 7.3 0.12 12.2 0.3 3.4 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF49582 - 0.021 14.7 3.1 0.5 10.4 0.1 2.7 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF49582 - 0.068 13.5 0.6 3 8.2 0.0 2.6 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region NUC PF18510.1 ORF49582 - 0.37 11.2 5.8 1.4 9.3 5.8 1.9 1 1 0 1 1 1 0 Nuclease domain DNA_methylase PF00145.17 ORF49321 - 0.0012 18.2 0.0 0.0031 16.9 0.0 1.6 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase RINGv PF12906.7 ORF46686 - 0.0045 17.1 0.5 0.0072 16.4 0.5 1.3 1 0 0 1 1 1 1 RING-variant domain PHD PF00628.29 ORF46686 - 0.011 15.7 0.7 0.017 15.0 0.7 1.3 1 0 0 1 1 1 0 PHD-finger Aim19 PF10315.9 ORF46686 - 0.067 13.5 0.3 0.16 12.2 0.0 1.8 2 1 0 2 2 2 0 Altered inheritance of mitochondria protein 19 DUF983 PF06170.12 ORF46686 - 0.1 13.0 2.6 6.4 7.2 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF983) DctQ PF04290.12 ORF46686 - 0.19 11.6 6.3 0.51 10.3 1.8 2.1 1 1 1 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component zf-H2C2_5 PF13909.6 ORF46686 - 0.6 9.9 2.4 1 9.2 2.4 1.4 1 0 0 1 1 1 0 C2H2-type zinc-finger domain Gal_mutarotas_2 PF13802.6 ORF46113 - 8e-05 22.9 0.3 0.00014 22.1 0.3 1.5 1 0 0 1 1 1 1 Galactose mutarotase-like NtCtMGAM_N PF16863.5 ORF46113 - 0.0034 17.5 0.2 0.006 16.8 0.2 1.7 1 1 0 1 1 1 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase Pkinase PF00069.25 ORF43951 - 3.9e-62 210.0 0.5 4.3e-62 209.9 0.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF43951 - 9.5e-36 123.4 0.0 1e-35 123.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF43951 - 1.8e-11 43.9 0.0 2.3e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF43951 - 1.3e-08 34.2 0.4 1.8e-08 33.8 0.4 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF43951 - 9.6e-06 25.1 0.6 2.8e-05 23.5 0.2 2.0 2 1 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF43951 - 0.00022 20.2 0.1 0.00054 18.8 0.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF43951 - 0.0021 17.2 0.7 0.0039 16.3 0.1 1.8 2 0 0 2 2 2 1 Seadornavirus VP7 APH PF01636.23 ORF43951 - 0.025 14.5 0.0 0.096 12.6 0.1 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF43951 - 0.14 11.7 0.1 0.22 11.1 0.1 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Ank_4 PF13637.6 ORF43630 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF43630 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF43630 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF43630 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF43630 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF43630 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain zf-B_box PF00643.24 ORF43368 - 0.0066 16.6 7.8 0.0066 16.6 7.8 1.7 2 0 0 2 2 2 1 B-box zinc finger QLQ PF08880.11 ORF43368 - 0.086 12.6 0.1 0.15 11.8 0.1 1.4 1 0 0 1 1 1 0 QLQ DUF1690 PF07956.11 ORF43368 - 0.32 11.4 7.1 0.21 12.0 5.0 1.8 1 1 1 2 2 2 0 Protein of Unknown function (DUF1690) Carla_C4 PF01623.17 ORF4290 - 0.029 14.3 0.9 0.054 13.5 0.9 1.4 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein Ank_4 PF13637.6 ORF41007 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF41007 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF41007 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF41007 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF41007 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF41007 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Adap_comp_sub PF00928.21 ORF40814 - 3.2e-18 66.0 0.5 5.7e-18 65.2 0.1 1.6 2 0 0 2 2 2 1 Adaptor complexes medium subunit family Ank_4 PF13637.6 ORF40385 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF40385 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF40385 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF40385 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF40385 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF40385 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain WD40 PF00400.32 ORF39790 - 1.9e-06 28.5 0.6 2 9.4 0.0 4.2 4 0 0 4 4 4 3 WD domain, G-beta repeat Ank_4 PF13637.6 ORF38977 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF38977 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF38977 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF38977 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF38977 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF38977 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Ank_4 PF13637.6 ORF37805 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF37805 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF37805 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF37805 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF37805 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF37805 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Ank_4 PF13637.6 ORF37556 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF37556 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF37556 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF37556 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF37556 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF37556 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain DNA_pol_B_thumb PF14791.6 ORF37408 - 1.6e-12 47.4 0.0 2.7e-12 46.7 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase beta thumb DHR10 PF18595.1 ORF36377 - 0.0014 18.6 5.4 0.0027 17.8 5.4 1.4 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain HAUS-augmin3 PF14932.6 ORF36377 - 0.0095 15.5 3.9 0.013 15.1 3.9 1.1 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 Trimer_CC PF08954.11 ORF36377 - 0.011 15.3 1.9 0.011 15.3 1.9 2.4 1 1 1 2 2 2 0 Trimerisation motif Adaptin_binding PF10199.9 ORF36377 - 0.025 15.2 0.6 0.039 14.6 0.6 1.3 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Rpn3_C PF08375.11 ORF36377 - 0.047 14.1 0.4 0.097 13.1 0.4 1.5 1 0 0 1 1 1 0 Proteasome regulatory subunit C-terminal DUF4407 PF14362.6 ORF36377 - 0.1 12.0 1.9 0.14 11.5 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF36377 - 0.13 12.9 11.5 0.17 12.6 10.5 1.7 1 1 0 1 1 1 0 SlyX DUF5315 PF17242.2 ORF36377 - 0.19 11.5 7.9 0.53 10.1 7.2 1.9 1 1 1 2 2 2 0 Disordered region of unknown function (DUF5315) RSF PF14876.6 ORF36377 - 0.25 10.2 1.1 0.31 10.0 0.4 1.4 1 1 0 1 1 1 0 Respiratory growth transcriptional regulator DUF3947 PF13135.6 ORF36377 - 2.1 8.6 4.4 3 8.1 3.7 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3947) Ras PF00071.22 ORF34107 - 4.8e-49 166.1 0.0 5.8e-49 165.8 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF34107 - 5.5e-30 104.1 0.0 8.8e-30 103.4 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF34107 - 1.7e-10 40.6 0.0 2.4e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF34107 - 0.0021 18.1 0.0 0.0032 17.5 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF34107 - 0.0037 16.5 1.6 1.9 7.6 0.1 2.8 2 1 1 3 3 3 2 G-protein alpha subunit ArgoMid PF16487.5 ORF34107 - 0.0052 17.0 0.1 0.0099 16.1 0.1 1.4 1 0 0 1 1 1 1 Mid domain of argonaute RNA_helicase PF00910.22 ORF34107 - 0.0066 16.8 0.4 0.16 12.3 0.4 2.3 1 1 0 1 1 1 1 RNA helicase Gtr1_RagA PF04670.12 ORF34107 - 0.0086 15.5 0.0 0.012 15.0 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Septin PF00735.18 ORF34107 - 0.051 12.8 0.0 0.15 11.3 0.0 1.7 2 0 0 2 2 2 0 Septin AAA_7 PF12775.7 ORF34107 - 0.06 12.9 0.0 0.1 12.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF34107 - 0.079 12.9 0.1 7.8 6.4 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase Pox_A32 PF04665.12 ORF34107 - 0.12 11.8 0.2 0.32 10.4 0.0 1.6 2 0 0 2 2 2 0 Poxvirus A32 protein ATP_bind_1 PF03029.17 ORF34107 - 0.13 12.0 0.1 12 5.6 0.2 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Chloroa_b-bind PF00504.21 ORF32675 - 1.7e-25 90.4 0.8 2.2e-25 90.0 0.8 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein NHL PF01436.21 ORF30076 - 3.7e-21 74.0 0.6 3.5e-05 23.6 0.0 4.5 4 0 0 4 4 4 4 NHL repeat SGL PF08450.12 ORF30076 - 0.0015 18.1 0.0 0.13 11.9 0.0 3.1 1 1 0 2 2 2 1 SMP-30/Gluconolactonase/LRE-like region WD40 PF00400.32 ORF29365 - 1.9e-06 28.5 0.6 2 9.4 0.0 4.2 4 0 0 4 4 4 3 WD domain, G-beta repeat Lipase_3 PF01764.25 ORF29025 - 7.9e-13 48.5 0.0 1.5e-12 47.6 0.0 1.5 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF29025 - 2.1e-05 25.3 0.8 2.6e-05 24.9 0.8 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 ORF29025 - 0.0047 16.7 0.0 0.01 15.6 0.0 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF29025 - 0.011 15.8 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Hydrolase_4 PF12146.8 ORF29025 - 0.02 14.2 0.0 0.036 13.3 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 ORF29025 - 0.084 12.7 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold EF-hand_6 PF13405.6 ORF28999 - 1.1e-11 43.6 5.6 6.7e-06 25.6 0.1 3.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF28999 - 1.5e-10 39.8 7.6 0.00015 21.1 0.3 3.6 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF28999 - 1.8e-08 34.7 6.9 0.00012 22.5 2.0 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF28999 - 0.00016 21.0 4.3 0.045 13.3 0.2 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF28999 - 0.00027 20.7 7.3 0.12 12.2 0.3 3.4 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF28999 - 0.021 14.7 3.1 0.5 10.4 0.1 2.7 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF28999 - 0.068 13.5 0.6 3 8.2 0.0 2.6 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region NUC PF18510.1 ORF28999 - 0.37 11.2 5.8 1.4 9.3 5.8 1.9 1 1 0 1 1 1 0 Nuclease domain EF-hand_7 PF13499.6 ORF26919 - 0.0015 18.9 0.0 0.0047 17.4 0.1 1.7 2 0 0 2 2 2 1 EF-hand domain pair Ank_4 PF13637.6 ORF24843 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF24843 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF24843 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF24843 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF24843 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF24843 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Ank_4 PF13637.6 ORF23932 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF23932 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF23932 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF23932 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF23932 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF23932 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain PRMT5_C PF17286.2 ORF2358 - 0.015 15.2 0.1 0.019 14.9 0.1 1.2 1 0 0 1 1 1 0 PRMT5 oligomerisation domain Ras PF00071.22 ORF22656 - 8.1e-47 158.8 3.3 9.7e-47 158.6 3.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF22656 - 6e-28 97.5 0.3 1.1e-27 96.6 0.3 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF22656 - 1.1e-16 60.8 0.4 1.4e-16 60.4 0.4 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF22656 - 5.2e-06 26.0 3.5 7.3e-06 25.5 3.5 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF22656 - 0.00012 21.7 1.1 0.00019 21.1 1.1 1.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF22656 - 0.0003 20.3 0.1 0.00038 20.0 0.1 1.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Thioredoxin_14 PF18402.1 ORF22656 - 0.038 13.9 0.1 0.046 13.7 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Tcp10_C PF07202.13 ORF22629 - 1.9e-20 73.5 1.6 1.9e-20 73.5 1.6 2.1 2 0 0 2 2 2 1 T-complex protein 10 C-terminus YkuD PF03734.14 ORF22629 - 0.026 14.9 1.0 0.054 13.9 0.1 2.1 2 1 0 2 2 2 0 L,D-transpeptidase catalytic domain OATP PF03137.20 ORF17004 - 0.0093 14.3 1.7 0.0093 14.3 1.7 1.6 2 0 0 2 2 2 1 Organic Anion Transporter Polypeptide (OATP) family NPR3 PF03666.13 ORF17004 - 0.14 10.9 3.4 0.19 10.5 3.4 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 RNA_pol_Rpb5_C PF01191.19 ORF1497 - 3.4e-34 116.5 0.3 6.3e-34 115.7 0.3 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb5_N PF03871.14 ORF1497 - 3.6e-24 85.2 0.4 3.6e-24 85.2 0.4 1.7 2 1 0 2 2 2 1 RNA polymerase Rpb5, N-terminal domain Mrr_cat PF04471.12 ORF1497 - 0.0012 18.9 0.1 0.0021 18.1 0.1 1.4 1 1 0 1 1 1 1 Restriction endonuclease VSP PF03302.13 ORF12293 - 0.0035 16.3 5.2 0.0044 15.9 5.2 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein cEGF PF12662.7 ORF12293 - 0.0096 15.8 2.9 0.021 14.8 2.9 1.5 1 0 0 1 1 1 1 Complement Clr-like EGF-like DUF3687 PF12459.8 ORF12293 - 0.29 10.7 7.1 1.9 8.1 0.8 2.8 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein PolC_DP2 PF03833.13 ORF12293 - 1.6 6.5 4.5 2 6.2 4.5 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 FXa_inhibition PF14670.6 ORF12293 - 2.3 8.6 11.5 4 7.8 11.5 1.4 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site CDC37_M PF08565.11 ORF11743 - 0.018 14.9 0.4 0.044 13.7 0.4 1.6 1 0 0 1 1 1 0 Cdc37 Hsp90 binding domain HA PF03457.14 ORF1138 - 0.046 14.1 2.2 39 4.7 0.0 3.3 3 0 0 3 3 3 0 Helicase associated domain Carla_C4 PF01623.17 ORF11332 - 0.029 14.3 0.9 0.054 13.5 0.9 1.4 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein DUF4658 PF15555.6 ORF111239 - 0.15 12.2 3.2 0.31 11.2 3.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) Glu_cyclase_2 PF05096.12 ORF110859 - 4.7e-48 163.8 0.2 5.3e-48 163.6 0.2 1.0 1 0 0 1 1 1 1 Glutamine cyclotransferase SGL PF08450.12 ORF110859 - 0.003 17.2 0.0 0.072 12.7 0.0 2.5 3 0 0 3 3 3 1 SMP-30/Gluconolactonase/LRE-like region Acetone_carb_G PF08882.11 ORF110859 - 0.042 14.0 0.0 0.074 13.2 0.0 1.4 1 0 0 1 1 1 0 Acetone carboxylase gamma subunit SdiA-regulated PF06977.11 ORF110859 - 0.053 12.8 0.0 1.3 8.1 0.0 2.2 2 0 0 2 2 2 0 SdiA-regulated PUL PF08324.11 ORF110723 - 0.021 14.0 0.1 0.038 13.2 0.1 1.4 1 0 0 1 1 1 0 PUL domain Prominin PF05478.11 ORF110723 - 0.47 8.4 10.0 0.59 8.0 10.0 1.1 1 0 0 1 1 1 0 Prominin Exonuc_VII_L PF02601.15 ORF110723 - 0.63 9.5 11.1 0.82 9.2 11.1 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4407 PF14362.6 ORF110723 - 0.75 9.1 6.2 0.92 8.8 6.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AAA_11 PF13086.6 ORF110723 - 0.93 9.2 13.8 1.2 8.9 13.8 1.3 1 0 0 1 1 1 0 AAA domain UPF0242 PF06785.11 ORF110723 - 0.96 9.5 17.9 1.3 9.1 17.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus BPL_N PF09825.9 ORF110723 - 1 8.4 6.9 1.1 8.2 6.9 1.3 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal Band_3_cyto PF07565.13 ORF110723 - 1.1 9.0 12.6 1.3 8.8 12.6 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain LtuB PF17455.2 ORF110723 - 1.1 9.9 6.5 0.35 11.5 2.7 2.0 1 1 1 2 2 2 0 Late transcription unit B Fucose_iso_N2 PF07882.12 ORF110723 - 1.9 8.1 7.7 2.8 7.5 7.7 1.3 1 0 0 1 1 1 0 L-fucose isomerase, second N-terminal domain SID-1_RNA_chan PF13965.6 ORF110723 - 2.8 6.3 7.5 3 6.1 7.5 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 ALMT PF11744.8 ORF110723 - 4 6.1 13.2 4.8 5.9 13.2 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Amidase PF01425.21 ORF110489 - 2.9e-18 66.1 0.1 1.2e-17 64.0 0.0 2.0 2 1 0 2 2 2 1 Amidase DUF2140 PF09911.9 ORF110489 - 0.064 12.8 0.6 0.1 12.2 0.6 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2140) Ank_4 PF13637.6 ORF110377 - 8.3e-19 67.7 0.1 8.7e-12 45.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF110377 - 3.6e-15 56.3 0.0 7.7e-15 55.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF110377 - 1.9e-13 50.3 0.0 1.1e-10 41.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF110377 - 5e-13 47.9 0.0 1.2e-06 28.4 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF110377 - 2.1e-10 40.6 0.0 3.7e-06 27.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF110377 - 0.025 14.8 0.3 0.051 13.8 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain MazG-like PF12643.7 ORF110204 - 2.4e-09 37.3 0.0 8e-09 35.6 0.0 1.9 2 0 0 2 2 2 1 MazG-like family MazG PF03819.17 ORF110204 - 2.3e-05 24.5 0.0 0.00018 21.6 0.0 2.5 3 1 0 3 3 3 1 MazG nucleotide pyrophosphohydrolase domain BsuBI_PstI_RE_N PF17728.1 ORF110055 - 0.18 11.7 0.1 0.29 11.0 0.1 1.2 1 0 0 1 1 1 0 BsuBI/PstI restriction endonuclease HTH domain Sulfotransfer_2 PF03567.14 ORF109870 - 1.4e-05 25.2 2.5 0.00065 19.7 2.3 2.2 1 1 0 1 1 1 1 Sulfotransferase family IF4E PF01652.18 ORF105429 - 2.5e-40 137.9 0.6 3e-40 137.6 0.6 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E WD40 PF00400.32 ORF105124 - 1.9e-06 28.5 0.6 2 9.4 0.0 4.2 4 0 0 4 4 4 3 WD domain, G-beta repeat Amidase PF01425.21 ORF104654 - 2.9e-18 66.1 0.1 1.2e-17 64.0 0.0 2.0 2 1 0 2 2 2 1 Amidase DUF2140 PF09911.9 ORF104654 - 0.064 12.8 0.6 0.1 12.2 0.6 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2140) Mem_trans PF03547.18 ORF104483 - 2.1e-07 29.7 5.8 2.6e-07 29.4 5.8 1.0 1 0 0 1 1 1 1 Membrane transport protein Citrate_synt PF00285.21 ORF104192 - 5.1e-22 78.4 0.0 5.5e-21 75.0 0.0 1.9 1 1 0 1 1 1 1 Citrate synthase, C-terminal domain Peptidase_C65 PF10275.9 ORF101473 - 3.3e-46 157.8 4.9 3.6e-46 157.6 4.9 1.0 1 0 0 1 1 1 1 Peptidase C65 Otubain FKBP_N_2 PF18023.1 ORF101473 - 0.0061 16.6 0.2 3.7 7.7 0.0 3.1 2 1 0 2 2 2 1 BDBT FKBP like N-terminal OTU PF02338.19 ORF101473 - 0.0086 16.6 0.3 0.032 14.7 0.3 1.9 1 1 0 1 1 1 1 OTU-like cysteine protease DUF4581 PF15167.6 ORF101473 - 0.061 13.5 0.8 20 5.4 0.0 2.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4581) PIG-X PF08320.12 ORF101473 - 0.12 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 PIG-X / PBN1 EGF PF00008.27 NODE_34303_length_631_cov_226.196309_g27391_i0forward_frame_1 - 0.056 13.8 13.1 0.34 11.2 0.4 3.5 4 0 0 4 4 4 0 EGF-like domain EGF_2 PF07974.13 NODE_34303_length_631_cov_226.196309_g27391_i0forward_frame_1 - 0.22 11.9 13.0 2.9 8.4 0.2 3.8 4 0 0 4 4 4 0 EGF-like domain NADH-G_4Fe-4S_3 PF10588.9 NODE_34303_length_631_cov_226.196309_g27391_i0forward_frame_1 - 0.28 10.7 2.3 9.6 5.8 0.1 2.7 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks92.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks92.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks92.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks92.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:20:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UPF0242 PF06785.11 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.0013 18.9 0.8 0.0013 18.9 0.8 1.8 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus LTXXQ PF07813.12 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.0016 19.1 1.8 0.017 15.8 0.0 2.4 2 1 0 2 2 2 1 LTXXQ motif family protein H-kinase_dim PF02895.14 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.0031 17.9 1.3 0.0094 16.3 1.3 1.8 1 1 0 1 1 1 1 Signal transducing histidine kinase, homodimeric domain Exonuc_VII_L PF02601.15 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.022 14.3 2.0 0.03 13.9 2.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Endotoxin_C2 PF18449.1 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.033 14.5 6.0 1.4 9.3 0.5 2.4 2 0 0 2 2 2 0 Delta endotoxin SKA2 PF16740.5 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.059 13.2 0.7 0.059 13.2 0.7 2.0 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 AATF-Che1 PF13339.6 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.065 13.9 3.1 0.1 13.3 3.1 1.4 1 0 0 1 1 1 0 Apoptosis antagonizing transcription factor EAP30 PF04157.16 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.12 11.6 2.3 1.8 7.8 0.5 2.1 1 1 1 2 2 2 0 EAP30/Vps36 family Taxilin PF09728.9 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.15 11.3 8.7 0.23 10.6 8.7 1.3 1 0 0 1 1 1 0 Myosin-like coiled-coil protein Spectrin PF00435.21 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.17 12.4 6.4 0.75 10.3 6.2 2.1 1 1 0 1 1 1 0 Spectrin repeat Filament PF00038.21 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.3 10.6 7.6 0.38 10.3 7.0 1.4 1 1 0 1 1 1 0 Intermediate filament protein Phage_GP20 PF06810.11 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.39 10.5 9.0 0.037 13.8 3.1 2.0 2 0 0 2 2 2 0 Phage minor structural protein GP20 DUF1664 PF07889.12 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.43 10.6 3.9 0.15 12.1 1.2 1.6 2 0 0 2 2 1 0 Protein of unknown function (DUF1664) Prominin PF05478.11 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.55 8.1 1.5 0.74 7.7 1.5 1.1 1 0 0 1 1 1 0 Prominin KxDL PF10241.9 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.67 10.3 6.6 0.18 12.1 1.1 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein GTP-bdg_M PF16360.5 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 0.99 10.1 6.7 0.47 11.1 0.3 2.4 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region Occludin_ELL PF07303.13 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 1 10.2 4.9 0.41 11.4 0.2 2.3 1 1 1 2 2 2 0 Occludin homology domain YscO PF07321.12 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 1.5 8.8 11.7 0.15 12.0 1.9 2.2 2 0 0 2 2 2 0 Type III secretion protein YscO Seryl_tRNA_N PF02403.22 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 2.5 8.4 13.2 0.79 10.0 3.4 3.2 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain SbsC_C PF18058.1 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 2.8 8.2 5.6 14 5.9 0.2 2.8 2 1 1 3 3 3 0 SbsC C-terminal domain Mod_r PF07200.13 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 3.2 7.8 8.9 0.18 11.9 2.1 2.1 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein TPR_MLP1_2 PF07926.12 NODE_34279_length_632_cov_3.542714_g27371_i0reverse_frame_1 - 9.7 6.3 14.7 55 3.8 13.2 2.4 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein TPR_8 PF13181.6 NODE_34229_length_633_cov_2.339465_g27331_i0forward_frame_1 - 0.24 11.7 2.4 3.2 8.2 0.0 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat LytTR PF04397.15 NODE_34228_length_633_cov_2.550167_g27330_i0reverse_frame_1 - 1.9e-19 69.7 0.0 2.6e-19 69.3 0.0 1.2 1 0 0 1 1 1 1 LytTr DNA-binding domain HTH_1 PF00126.27 NODE_34181_length_634_cov_3.472454_g27288_i0reverse_frame_3 - 1.9e-16 59.7 0.1 3.6e-16 58.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 NODE_34181_length_634_cov_3.472454_g27288_i0reverse_frame_3 - 3.7e-14 52.6 0.1 5.1e-14 52.1 0.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain Glyoxal_oxid_N PF07250.11 NODE_34180_length_634_cov_3.958264_g27287_i0reverse_frame_3 - 0.12 11.5 0.1 0.16 11.1 0.1 1.2 1 0 0 1 1 1 0 Glyoxal oxidase N-terminus WW_FCH_linker PF16623.5 NODE_34180_length_634_cov_3.958264_g27287_i0forward_frame_2 - 0.096 13.4 0.1 0.23 12.2 0.1 1.6 1 1 0 1 1 1 0 Unstructured linker region between on GAS7 protein zf-RING_2 PF13639.6 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 1.2e-05 25.6 1.3 1.7e-05 25.0 0.3 1.8 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 2.7e-05 23.8 2.2 2.7e-05 23.8 2.2 2.4 3 0 0 3 3 3 1 RING-like zinc finger TMEM154 PF15102.6 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.00012 22.0 1.5 0.00018 21.4 1.5 1.2 1 0 0 1 1 1 1 TMEM154 protein family zf-C3HC4_2 PF13923.6 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.00096 18.9 0.3 0.0025 17.6 0.3 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.0015 18.8 0.3 0.0047 17.2 0.3 1.9 1 0 0 1 1 1 1 RING-H2 zinc finger domain EphA2_TM PF14575.6 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.0027 18.6 0.1 0.0053 17.6 0.1 1.5 1 0 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain zf-C3HC4 PF00097.25 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.0073 16.2 0.6 0.0073 16.2 0.6 2.3 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.021 14.9 0.3 0.021 14.9 0.3 1.9 2 0 0 2 2 2 0 RING-type zinc-finger TMEM51 PF15345.6 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.026 14.4 0.1 0.036 13.9 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 51 zf-Nse PF11789.8 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.032 14.0 0.4 0.08 12.8 0.4 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_5 PF14634.6 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.035 14.1 0.5 0.035 14.1 0.5 1.8 2 0 0 2 2 2 0 zinc-RING finger domain Shisa PF13908.6 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.049 13.9 0.1 0.07 13.4 0.1 1.4 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator zf-ANAPC11 PF12861.7 NODE_34177_length_634_cov_46.487479_g27285_i0reverse_frame_3 - 0.061 13.4 0.1 0.12 12.5 0.1 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Toxin_28 PF08115.11 NODE_34171_length_634_cov_78.447412_g26768_i1reverse_frame_3 - 0.16 11.9 0.3 0.28 11.1 0.3 1.3 1 0 0 1 1 1 0 SFI toxin family DUF3487 PF11990.8 NODE_34168_length_634_cov_90.833055_g27278_i0forward_frame_2 - 2.5 8.0 6.1 0.73 9.7 3.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) Methyltransf_23 PF13489.6 NODE_34167_length_634_cov_92.834725_g27277_i0reverse_frame_2 - 0.00025 20.9 0.0 0.00036 20.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_34167_length_634_cov_92.834725_g27277_i0reverse_frame_2 - 0.0031 18.1 0.0 0.0058 17.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_34167_length_634_cov_92.834725_g27277_i0reverse_frame_2 - 0.005 17.6 0.0 0.0073 17.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_34167_length_634_cov_92.834725_g27277_i0reverse_frame_2 - 0.0074 16.1 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain UPF0029 PF01205.19 NODE_34161_length_634_cov_140.956594_g27271_i0reverse_frame_2 - 1.1e-30 106.1 0.0 1.6e-30 105.5 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF4885 PF16226.5 NODE_34161_length_634_cov_140.956594_g27271_i0reverse_frame_2 - 0.073 12.1 0.0 0.1 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4885) zf_CopZ PF18423.1 NODE_34161_length_634_cov_140.956594_g27271_i0forward_frame_2 - 0.13 12.3 0.0 0.27 11.2 0.0 1.5 2 0 0 2 2 2 0 Zinc binding domain WD40 PF00400.32 NODE_34151_length_634_cov_254.762938_g27262_i0forward_frame_3 - 0.013 16.4 3.3 7.7 7.6 0.2 4.0 4 1 0 4 4 4 0 WD domain, G-beta repeat SH3_6 PF12913.7 NODE_34151_length_634_cov_254.762938_g27262_i0forward_frame_3 - 0.11 12.1 0.0 0.35 10.5 0.0 1.8 2 0 0 2 2 2 0 SH3 domain (SH3b1 type) RRM_1 PF00076.22 NODE_34148_length_634_cov_265.888147_g27259_i0reverse_frame_3 - 5.1e-12 45.4 0.0 8.6e-12 44.7 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_34148_length_634_cov_265.888147_g27259_i0reverse_frame_3 - 0.086 13.0 0.0 0.28 11.3 0.0 1.7 1 1 0 1 1 1 0 RNA recognition motif RRM_occluded PF16842.5 NODE_34148_length_634_cov_265.888147_g27259_i0reverse_frame_3 - 0.12 12.3 0.0 0.28 11.1 0.0 1.7 1 1 0 1 1 1 0 Occluded RNA-recognition motif 7tm_3 PF00003.22 NODE_34148_length_634_cov_265.888147_g27259_i0forward_frame_3 - 0.17 11.6 1.7 0.23 11.2 1.7 1.2 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR COLFI PF01410.18 NODE_34143_length_634_cov_334.347245_g27254_i0forward_frame_3 - 0.15 11.4 0.1 0.22 10.8 0.1 1.2 1 0 0 1 1 1 0 Fibrillar collagen C-terminal domain DUF4778 PF16008.5 NODE_34143_length_634_cov_334.347245_g27254_i0forward_frame_2 - 0.022 14.9 7.1 0.028 14.5 7.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) NCD2 PF04905.13 NODE_34137_length_634_cov_1371.621035_g27250_i0forward_frame_3 - 0.026 14.5 0.5 0.048 13.6 0.5 1.5 1 0 0 1 1 1 0 NAB conserved region 2 (NCD2) TTL PF03133.15 NODE_34123_length_635_cov_3.551667_g27239_i0reverse_frame_3 - 2.3e-22 79.5 2.2 2.3e-22 79.5 2.2 1.6 1 1 1 2 2 2 1 Tubulin-tyrosine ligase family DUF3981 PF13139.6 NODE_34123_length_635_cov_3.551667_g27239_i0forward_frame_2 - 0.053 13.9 0.9 0.14 12.6 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3981) SLT PF01464.20 NODE_34121_length_635_cov_4.471667_g27237_i0reverse_frame_2 - 1.7e-12 47.1 0.0 2.6e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain MLTD_N PF06474.12 NODE_34121_length_635_cov_4.471667_g27237_i0reverse_frame_2 - 0.013 15.7 0.7 0.022 14.9 0.7 1.4 1 0 0 1 1 1 0 MltD lipid attachment motif VirE2 PF07229.12 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_3 - 0.041 12.6 1.5 2.3 6.8 0.0 3.2 3 2 1 4 4 4 0 VirE2 Ank_2 PF12796.7 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 7.9e-35 119.3 8.8 2e-12 47.5 0.4 3.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 1.2e-31 108.6 6.4 1.1e-10 41.8 0.1 4.1 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 5.7e-29 99.8 8.5 2.1e-08 34.3 0.3 5.3 1 1 3 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 3.8e-28 96.7 8.2 3.1e-05 24.2 0.0 6.1 6 0 0 6 6 6 6 Ankyrin repeat Ank_3 PF13606.6 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 6.3e-21 72.2 0.8 0.0028 18.0 0.0 6.1 6 0 0 6 6 6 5 Ankyrin repeat UDPG_MGDP_dh_C PF03720.15 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 0.0056 17.1 1.1 5.6 7.4 0.1 3.0 2 1 1 3 3 3 2 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DUF1018 PF06252.12 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 0.015 16.3 4.4 4.5 8.3 0.1 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF1018) HHH_6 PF14579.6 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 0.34 11.2 7.1 2.9 8.2 0.1 3.4 2 1 3 5 5 5 0 Helix-hairpin-helix motif DUF1967 PF09269.11 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 0.42 10.6 2.4 58 3.7 0.0 3.8 4 0 0 4 4 4 0 Domain of unknown function (DUF1967) ORF_2_N PF18492.1 NODE_34115_length_635_cov_82.520000_g27231_i0reverse_frame_2 - 2.4 8.4 11.4 0.93 9.7 0.4 3.7 1 1 2 4 4 4 0 Open reading frame 2 N-terminal domain U83 PF17465.2 NODE_34115_length_635_cov_82.520000_g27231_i0forward_frame_3 - 0.11 12.6 0.6 0.53 10.5 0.1 2.1 1 1 1 2 2 2 0 Chemokine-like protein, HHV-6 U83 gene product PPV_E2_C PF00511.17 NODE_34115_length_635_cov_82.520000_g27231_i0forward_frame_3 - 0.65 10.2 7.0 12 6.1 0.1 3.5 4 0 0 4 4 4 0 E2 (early) protein, C terminal Glyco_hydro_31 PF01055.26 NODE_34114_length_635_cov_84.090000_g27230_i0forward_frame_3 - 1.2e-30 107.1 0.1 1.6e-30 106.7 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 NODE_34114_length_635_cov_84.090000_g27230_i0forward_frame_3 - 2.3e-05 24.6 0.7 4.8e-05 23.6 0.7 1.5 1 0 0 1 1 1 1 Galactose mutarotase-like DUF5478 PF17572.2 NODE_34113_length_635_cov_90.575000_g27229_i0forward_frame_3 - 0.035 14.2 3.2 0.085 13.0 3.2 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5478) STAT2_C PF12188.8 NODE_34112_length_635_cov_91.050000_g27228_i0forward_frame_3 - 0.083 12.8 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 Signal transducer and activator of transcription 2 C terminal Hormone_1 PF00103.20 NODE_34100_length_635_cov_164.530000_g27217_i0forward_frame_3 - 0.0021 17.8 2.7 0.004 16.9 2.7 1.5 1 0 0 1 1 1 1 Somatotropin hormone family Antimicrobial_1 PF08018.11 NODE_34091_length_635_cov_265.263333_g27208_i0reverse_frame_2 - 0.26 11.5 2.3 0.42 10.8 2.3 1.3 1 0 0 1 1 1 0 Frog antimicrobial peptide Glyco_transf_4 PF13439.6 NODE_34080_length_635_cov_36889.983333_g20305_i11reverse_frame_3 - 0.31 11.0 2.0 0.4 10.7 2.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 SID-1_RNA_chan PF13965.6 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.00025 19.6 0.2 0.00035 19.1 0.2 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 Plasmodium_Vir PF05795.11 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.0012 18.4 3.7 0.0012 18.4 3.7 1.5 2 0 0 2 2 2 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.0018 17.2 4.8 0.0018 17.2 4.8 2.6 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 SLC12 PF03522.15 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.006 15.7 3.8 0.0064 15.6 3.8 1.1 1 0 0 1 1 1 1 Solute carrier family 12 Serinc PF03348.15 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.0093 14.9 4.1 0.099 11.6 4.1 2.0 1 1 0 1 1 1 1 Serine incorporator (Serinc) Nop14 PF04147.12 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.023 13.0 24.0 0.025 12.8 24.0 1.0 1 0 0 1 1 1 0 Nop14-like family DUF4045 PF13254.6 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.031 14.0 8.2 0.032 13.9 8.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) LAP1C PF05609.12 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.035 13.2 8.4 0.042 12.9 8.4 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) BSMAP PF12280.8 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.037 14.2 5.0 0.067 13.4 5.0 1.6 1 1 0 1 1 1 0 Brain specific membrane anchored protein Raftlin PF15250.6 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.056 12.2 6.5 0.064 12.0 6.5 1.1 1 0 0 1 1 1 0 Raftlin CDC45 PF02724.14 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.064 11.5 16.3 0.073 11.4 16.3 1.1 1 0 0 1 1 1 0 CDC45-like protein CSG2 PF16965.5 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.084 11.8 3.6 0.22 10.5 3.6 1.8 1 1 0 1 1 1 0 Ceramide synthase regulator RR_TM4-6 PF06459.12 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.087 12.6 17.0 0.12 12.2 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 GWT1 PF06423.12 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.17 12.0 3.8 1.2 9.3 3.8 2.0 1 1 0 1 1 1 0 GWT1 Connexin PF00029.19 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.2 11.4 10.5 2.3 7.9 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.31 9.1 6.8 0.38 8.8 6.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.4 10.7 5.8 5.5 7.0 3.5 2.2 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C Tho2 PF11262.8 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.48 9.6 7.4 0.68 9.1 7.4 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 PA26 PF04636.13 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.49 9.3 5.7 0.57 9.0 5.7 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) ALMT PF11744.8 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.5 9.1 6.9 0.81 8.5 6.9 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter CENP-N PF05238.13 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 0.64 9.3 8.9 0.82 8.9 8.9 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 1.1 9.2 5.6 1.3 9.0 5.6 1.2 1 0 0 1 1 1 0 Protein Family FAM60A V_ATPase_I PF01496.19 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 1.4 6.7 11.5 2 6.2 11.5 1.4 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Borrelia_P83 PF05262.11 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 1.9 6.9 18.4 2.3 6.6 18.4 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein Orf78 PF06024.12 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 3 8.2 10.8 4.1 7.8 6.8 2.8 2 1 0 2 2 2 0 Orf78 (ac78) ECM1 PF05782.11 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 3.3 6.5 14.1 4 6.2 14.1 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) CCSAP PF15748.5 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 3.6 7.7 15.9 4.6 7.3 15.9 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated DUF2207 PF09972.9 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 4.8 5.8 11.0 0.23 10.2 3.3 2.3 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) NPR3 PF03666.13 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 5 5.8 12.3 6.5 5.4 12.3 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Vma12 PF11712.8 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 5.2 7.1 6.0 0.67 10.0 1.1 2.0 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase SDA1 PF05285.12 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 6.2 6.2 36.3 8.6 5.7 36.3 1.1 1 0 0 1 1 1 0 SDA1 Vfa1 PF08432.10 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 8.8 6.6 21.1 14 6.0 21.1 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 CLN3 PF02487.17 NODE_34080_length_635_cov_36889.983333_g20305_i11forward_frame_3 - 9 5.2 8.9 18 4.2 8.9 1.7 1 1 0 1 1 1 0 CLN3 protein Rnk_N PF14760.6 NODE_34079_length_636_cov_2.484193_g27197_i0reverse_frame_2 - 6.6e-10 39.3 2.3 9.9e-10 38.7 2.3 1.3 1 0 0 1 1 1 1 Rnk N-terminus GreA_GreB PF01272.19 NODE_34079_length_636_cov_2.484193_g27197_i0reverse_frame_2 - 0.00019 21.3 0.0 0.00031 20.6 0.0 1.3 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term Malic_M PF03949.15 NODE_34074_length_636_cov_4.141431_g27192_i0reverse_frame_3 - 0.22 10.7 0.0 0.3 10.3 0.0 1.1 1 0 0 1 1 1 0 Malic enzyme, NAD binding domain Molydop_binding PF01568.21 NODE_34070_length_636_cov_89.926789_g27189_i0reverse_frame_2 - 0.022 14.8 0.0 0.041 13.9 0.0 1.4 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain TrkA_N PF02254.18 NODE_34070_length_636_cov_89.926789_g27189_i0reverse_frame_2 - 0.042 14.1 0.1 0.071 13.4 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain LmjF365940-deam PF14421.6 NODE_34058_length_636_cov_191.765391_g27179_i0reverse_frame_2 - 0.025 14.2 0.2 0.044 13.4 0.1 1.4 2 0 0 2 2 2 0 A distinct subfamily of CDD/CDA-like deaminases Pkinase PF00069.25 ORF99391 - 9.7e-06 25.1 0.0 1.5e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain PfkB PF00294.24 ORF99381 - 0.083 12.2 0.0 0.17 11.2 0.0 1.4 2 0 0 2 2 2 0 pfkB family carbohydrate kinase CCDC106 PF15794.5 ORF99381 - 6.2 6.5 13.1 1.7 8.3 5.5 2.1 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 106 His_biosynth PF00977.21 ORF99170 - 2.3e-25 89.4 0.1 2.7e-25 89.2 0.1 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Ribul_P_3_epim PF00834.19 ORF99170 - 0.0042 16.5 0.1 0.0085 15.5 0.1 1.5 2 0 0 2 2 2 1 Ribulose-phosphate 3 epimerase family PRAI PF00697.22 ORF99170 - 0.025 14.3 0.1 0.056 13.2 0.1 1.5 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BtpA PF03437.15 ORF99170 - 0.03 13.7 0.2 0.063 12.7 0.1 1.5 2 0 0 2 2 2 0 BtpA family DHO_dh PF01180.21 ORF99170 - 0.054 12.7 0.2 0.12 11.6 0.1 1.6 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase TMP-TENI PF02581.17 ORF99170 - 0.16 11.3 0.5 0.47 9.8 0.3 1.9 2 0 0 2 2 2 0 Thiamine monophosphate synthase Ras PF00071.22 ORF97154 - 9.7e-48 161.8 0.0 1.3e-47 161.5 0.0 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF97154 - 8.7e-32 109.9 0.0 1.2e-31 109.4 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF97154 - 1.1e-08 34.8 0.0 1.3e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF97154 - 1.2e-08 35.0 0.0 2.2e-08 34.2 0.0 1.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF97154 - 7.8e-07 28.8 0.0 4.7e-06 26.3 0.0 1.9 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF97154 - 5.5e-05 22.6 0.0 7.1e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF97154 - 0.00073 19.5 0.0 0.73 9.7 0.0 2.2 1 1 1 2 2 2 2 RsgA GTPase CPT PF07931.12 ORF97154 - 0.017 15.0 0.0 0.027 14.3 0.0 1.4 1 1 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_14 PF13173.6 ORF97154 - 0.02 14.9 0.0 0.03 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF97154 - 0.035 14.5 0.0 0.08 13.3 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain Leuk-A4-hydro_C PF09127.11 ORF93941 - 3.5e-26 91.5 0.0 6.5e-26 90.6 0.0 1.4 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Macro PF01661.21 ORF93274 - 8e-05 22.7 0.5 0.00019 21.5 0.0 1.9 2 0 0 2 2 2 1 Macro domain 7TM_GPCR_Srab PF10292.9 ORF93191 - 0.025 13.5 0.1 0.027 13.4 0.1 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor MatB PF16449.5 ORF89909 - 1.9e-90 301.1 13.7 2.5e-90 300.7 13.7 1.1 1 0 0 1 1 1 1 Fimbrillin MatB MatE PF01554.18 ORF87216 - 1.7e-18 66.8 2.5 2e-18 66.6 2.5 1.1 1 0 0 1 1 1 1 MatE Toxin_16 PF07945.11 ORF8719 - 3 7.8 13.4 2.1 8.3 9.5 2.9 2 1 0 2 2 2 0 Janus-atracotoxin RRM_1 PF00076.22 ORF86837 - 4.6e-07 29.6 0.0 7.5e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pkinase PF00069.25 ORF86291 - 7.6e-06 25.5 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain DnaJ PF00226.31 ORF85598 - 1.5e-06 28.2 0.0 3e-06 27.3 0.0 1.5 1 0 0 1 1 1 1 DnaJ domain Uds1 PF15456.6 ORF85598 - 0.022 14.9 3.4 0.029 14.5 2.1 1.9 2 0 0 2 2 2 0 Up-regulated During Septation ELM2 PF01448.24 ORF85598 - 0.17 12.7 0.0 0.5 11.2 0.0 1.7 2 0 0 2 2 2 0 ELM2 domain PRKG1_interact PF15898.5 ORF85598 - 0.24 12.3 3.8 0.94 10.4 0.0 2.3 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain ZapB PF06005.12 ORF85598 - 0.49 10.9 4.7 0.24 11.9 1.8 2.0 2 0 0 2 2 2 0 Cell division protein ZapB Pkinase PF00069.25 ORF84436 - 7.6e-06 25.5 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Senescence PF06911.12 ORF84328 - 0.16 12.3 4.3 1.6 9.0 4.3 2.2 1 1 0 1 1 1 0 Senescence-associated protein Pkinase PF00069.25 ORF82975 - 9.6e-57 192.3 0.1 1.1e-56 192.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82975 - 2.7e-39 135.0 0.0 3.3e-39 134.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF82975 - 0.0021 16.9 0.0 0.0037 16.1 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF82975 - 0.0044 16.4 0.0 0.0069 15.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF82975 - 0.0045 16.3 0.0 0.24 10.7 0.0 2.2 2 0 0 2 2 2 1 Kinase-like APH PF01636.23 ORF82975 - 0.0064 16.4 0.0 0.011 15.6 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF82975 - 0.01 14.8 0.1 0.02 13.9 0.1 1.5 1 1 0 1 1 1 0 Haspin like kinase domain Methyltransf_11 PF08241.12 ORF82735 - 1.5e-09 38.4 0.0 2.6e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF82735 - 1e-07 32.5 0.1 1.8e-07 31.8 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF82735 - 8e-07 29.0 0.0 1.4e-06 28.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF82735 - 0.00072 19.1 0.0 0.0041 16.7 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF82735 - 0.0045 17.0 0.0 0.0069 16.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF82735 - 0.005 17.6 0.0 0.0094 16.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF82735 - 0.014 15.3 0.0 0.018 14.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ubie_methyltran PF01209.18 ORF82735 - 0.16 11.2 0.0 0.53 9.6 0.0 1.8 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_9 PF08003.11 ORF82735 - 0.18 10.7 0.0 0.28 10.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Knl1_RWD_C PF18210.1 ORF82281 - 0.0004 20.8 0.3 0.00091 19.7 0.3 1.7 1 0 0 1 1 1 1 Knl1 RWD C-terminal domain POLO_box PF00659.18 ORF81357 - 1.7e-18 66.6 0.4 4e-18 65.4 0.4 1.7 1 0 0 1 1 1 1 POLO box duplicated region MlaC PF05494.12 ORF80652 - 9.3e-54 181.6 0.1 1.1e-53 181.4 0.1 1.1 1 0 0 1 1 1 1 MlaC protein Ank_2 PF12796.7 ORF77165 - 1.4e-18 67.2 2.8 7.7e-10 39.2 0.1 1.7 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF77165 - 1.5e-09 38.2 0.1 4.5e-05 23.9 0.2 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF77165 - 2.7e-06 27.3 0.0 0.0074 16.7 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF77165 - 0.00016 21.9 0.3 0.007 16.7 0.2 2.3 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF77165 - 0.00053 20.3 0.3 0.0022 18.3 0.2 2.1 3 0 0 3 3 3 1 Ankyrin repeat UDPGT PF00201.18 ORF77044 - 5.9e-11 41.8 0.0 8.3e-11 41.4 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF77044 - 0.0016 18.4 0.0 0.0022 18.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Ion_trans PF00520.31 ORF76626 - 3.3e-39 134.6 20.0 3.9e-39 134.4 20.0 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF76626 - 0.0066 15.2 21.3 0.017 13.8 4.1 2.8 1 1 1 3 3 3 2 Polycystin cation channel UPF0220 PF05255.11 ORF76626 - 0.14 11.7 7.6 0.97 9.0 0.1 2.6 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0220) DUF1422 PF07226.11 ORF76626 - 0.54 10.3 9.2 0.16 12.0 3.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1422) F-actin_cap_A PF01267.17 ORF75784 - 1.3e-30 106.7 0.0 1.5e-30 106.5 0.0 1.0 1 0 0 1 1 1 1 F-actin capping protein alpha subunit Pkinase PF00069.25 ORF74975 - 7.6e-06 25.5 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain CreD PF06123.12 ORF73928 - 0.16 10.7 0.2 0.2 10.4 0.2 1.1 1 0 0 1 1 1 0 Inner membrane protein CreD DUF2681 PF10883.8 ORF71721 - 0.022 15.1 0.7 0.056 13.9 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) TMF_TATA_bd PF12325.8 ORF71721 - 0.1 12.8 7.7 0.23 11.7 7.7 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding PEARLI-4 PF05278.12 ORF71721 - 0.11 12.1 6.3 0.16 11.5 6.3 1.2 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) Rrp15p PF07890.12 ORF71721 - 2.2 8.6 8.6 0.6 10.4 5.6 1.5 2 0 0 2 2 2 0 Rrp15p UDPGT PF00201.18 ORF63708 - 5.9e-11 41.8 0.0 8.3e-11 41.4 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF63708 - 0.0016 18.4 0.0 0.0022 18.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain RabGAP-TBC PF00566.18 ORF63676 - 1.1e-17 64.5 6.8 1.1e-17 64.5 6.8 2.0 2 1 0 2 2 2 1 Rab-GTPase-TBC domain Peptidase_S78 PF04586.17 ORF63676 - 0.058 13.6 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 Caudovirus prohead serine protease 7TMR-DISM_7TM PF07695.11 ORF63676 - 0.13 12.2 2.8 0.17 11.8 2.8 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling Coatomer_E PF04733.14 ORF63085 - 0.0062 16.0 0.7 0.11 11.9 0.0 2.1 2 0 0 2 2 2 1 Coatomer epsilon subunit DUF3892 PF13031.6 ORF63085 - 0.026 15.1 0.6 0.094 13.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3892) UPF0242 PF06785.11 ORF63085 - 3.4 7.7 16.4 0.75 9.9 11.3 1.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF724 PF05266.14 ORF63085 - 4.9 6.9 12.2 2.2 8.1 8.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) TMPIT PF07851.13 ORF63085 - 5.4 6.2 7.7 2.5 7.3 5.6 1.4 1 1 0 1 1 1 0 TMPIT-like protein RCC1_2 PF13540.6 ORF62697 - 0.044 13.6 0.9 0.1 12.4 0.9 1.7 1 1 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat Leuk-A4-hydro_C PF09127.11 ORF61825 - 3.5e-26 91.5 0.0 6.5e-26 90.6 0.0 1.4 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal LRR_6 PF13516.6 ORF60771 - 1.7e-14 52.5 15.0 3.8e-05 23.4 0.3 7.8 8 0 0 8 8 8 6 Leucine Rich repeat LRR_8 PF13855.6 ORF60771 - 0.0011 18.7 5.9 1.7 8.4 0.4 5.4 2 1 3 5 5 5 3 Leucine rich repeat LRR_4 PF12799.7 ORF60771 - 0.0056 17.1 2.7 4.4 7.9 0.1 4.6 4 2 1 5 5 5 2 Leucine Rich repeats (2 copies) Mito_carr PF00153.27 ORF58805 - 2.2e-36 123.6 0.2 1.3e-18 66.6 0.0 2.1 1 1 1 2 2 2 2 Mitochondrial carrier protein WD40 PF00400.32 ORF58232 - 3.5e-12 46.6 1.5 0.0033 18.2 0.6 3.5 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF58232 - 3.4e-07 30.5 0.1 0.067 13.5 0.0 4.0 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain DUF4221 PF13970.6 ORF58232 - 0.037 13.6 0.4 6.4 6.2 0.0 2.7 2 1 0 3 3 3 0 Domain of unknown function (DUF4221) WD40_like PF17005.5 ORF58232 - 0.072 12.4 0.1 1.1 8.5 0.0 2.6 1 1 1 2 2 2 0 WD40-like domain p450 PF00067.22 ORF57868 - 6.6e-40 137.2 0.0 7.6e-40 137.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF1768 PF08719.11 ORF57645 - 3.4e-13 50.1 0.3 6.8e-13 49.2 0.3 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF1768) Complex1_LYR PF05347.15 ORF57645 - 0.088 12.9 1.5 1.5 9.0 0.3 2.6 2 0 0 2 2 2 0 Complex 1 protein (LYR family) ETC_C1_NDUFA5 PF04716.14 ORF56637 - 3.8e-17 61.8 0.1 6.8e-17 61.0 0.1 1.4 1 0 0 1 1 1 1 ETC complex I subunit conserved region Glyoxalase PF00903.25 ORF55917 - 2.1e-10 40.9 0.0 3.7e-10 40.1 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 ORF55917 - 1.3e-06 29.1 0.0 2.5e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 ORF55917 - 1.6e-05 25.1 0.0 3.8e-05 23.9 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 ORF55917 - 0.076 13.1 0.2 0.47 10.5 0.1 2.0 1 1 1 2 2 2 0 Glyoxalase-like domain PMBR PF09373.10 ORF54602 - 0.05 13.8 0.6 0.16 12.2 0.6 2.0 1 0 0 1 1 1 0 Pseudomurein-binding repeat PTPlike_phytase PF14566.6 ORF5198 - 0.055 13.6 0.0 0.083 13.0 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate Com_YlbF PF06133.11 ORF5198 - 0.062 13.9 0.3 0.098 13.3 0.3 1.3 1 0 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA ETC_C1_NDUFA5 PF04716.14 ORF51185 - 3.8e-17 61.8 0.1 6.8e-17 61.0 0.1 1.4 1 0 0 1 1 1 1 ETC complex I subunit conserved region THF_DHG_CYH PF00763.23 ORF49930 - 0.15 12.3 0.0 0.33 11.2 0.0 1.6 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Gly_transf_sug PF04488.15 ORF4887 - 5.4e-09 36.6 0.0 9.8e-09 35.7 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase sugar-binding region containing DXD motif RE_HaeII PF09554.10 ORF4887 - 0.2 10.9 0.0 0.27 10.4 0.0 1.1 1 0 0 1 1 1 0 HaeII restriction endonuclease YniB PF14002.6 ORF4887 - 0.22 11.3 0.0 0.32 10.7 0.0 1.3 1 0 0 1 1 1 0 YniB-like protein WD40 PF00400.32 ORF47752 - 3.5e-12 46.6 1.5 0.0033 18.2 0.6 3.5 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF47752 - 3.4e-07 30.5 0.1 0.067 13.5 0.0 4.0 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain DUF4221 PF13970.6 ORF47752 - 0.037 13.6 0.4 6.4 6.2 0.0 2.7 2 1 0 3 3 3 0 Domain of unknown function (DUF4221) WD40_like PF17005.5 ORF47752 - 0.072 12.4 0.1 1.1 8.5 0.0 2.6 1 1 1 2 2 2 0 WD40-like domain Pox_A28 PF04584.14 ORF46873 - 0.45 10.7 3.3 0.91 9.7 0.3 2.3 1 1 1 2 2 2 0 Poxvirus A28 family EamA PF00892.20 ORF46665 - 6.9e-13 48.9 8.6 6.9e-13 48.9 8.6 1.5 2 0 0 2 2 2 1 EamA-like transporter family Poxvirus_B22R PF04395.12 ORF45062 - 0.11 12.0 0.8 0.15 11.6 0.8 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein Ion_trans PF00520.31 ORF44989 - 3.3e-39 134.6 20.0 3.9e-39 134.4 20.0 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF44989 - 0.0066 15.2 21.3 0.017 13.8 4.1 2.8 1 1 1 3 3 3 2 Polycystin cation channel UPF0220 PF05255.11 ORF44989 - 0.14 11.7 7.6 0.97 9.0 0.1 2.6 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0220) DUF1422 PF07226.11 ORF44989 - 0.54 10.3 9.2 0.16 12.0 3.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1422) YhhN PF07947.14 ORF43689 - 7.6e-45 152.8 19.1 1.1e-44 152.3 19.1 1.2 1 0 0 1 1 1 1 YhhN family Snf7 PF03357.21 ORF43336 - 4.1e-14 52.6 33.3 8.5e-14 51.5 33.3 1.6 1 1 0 1 1 1 1 Snf7 Glyco_hydro_3_C PF01915.22 ORF43336 - 0.067 13.1 1.3 0.084 12.8 1.3 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain DUF1910 PF08928.10 ORF43336 - 4 7.5 9.8 0.19 11.8 2.8 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF1910) Poxvirus_B22R PF04395.12 ORF42356 - 0.11 12.0 0.8 0.15 11.6 0.8 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein MxiM PF11441.8 ORF41532 - 0.2 11.9 0.2 0.2 11.9 0.2 1.6 2 0 0 2 2 2 0 Pilot protein MxiM Ion_trans PF00520.31 ORF40224 - 3.3e-39 134.6 20.0 3.9e-39 134.4 20.0 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF40224 - 0.0066 15.2 21.3 0.017 13.8 4.1 2.8 1 1 1 3 3 3 2 Polycystin cation channel UPF0220 PF05255.11 ORF40224 - 0.14 11.7 7.6 0.97 9.0 0.1 2.6 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0220) DUF1422 PF07226.11 ORF40224 - 0.54 10.3 9.2 0.16 12.0 3.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1422) Syntaxin-6_N PF09177.11 ORF39937 - 2.9e-05 24.5 2.3 5.2e-05 23.7 0.6 2.0 2 0 0 2 2 2 1 Syntaxin 6, N-terminal DUF2310 PF10071.9 ORF39937 - 0.46 9.7 3.0 1.3 8.2 0.3 2.1 2 0 0 2 2 2 0 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) MatE PF01554.18 ORF39724 - 1.7e-18 66.8 2.5 2e-18 66.6 2.5 1.1 1 0 0 1 1 1 1 MatE ADIP PF11559.8 ORF3672 - 0.0013 18.9 48.0 0.12 12.4 11.0 3.0 1 1 2 3 3 3 2 Afadin- and alpha -actinin-Binding Hrs_helical PF12210.8 ORF3672 - 0.003 18.1 30.5 0.044 14.3 2.2 3.8 2 1 2 4 4 4 2 Hepatocyte growth factor-regulated tyrosine kinase substrate TACC_C PF05010.14 ORF3672 - 0.0037 17.1 44.3 0.2 11.4 27.3 2.6 1 1 1 2 2 2 2 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF3450 PF11932.8 ORF3672 - 0.0057 16.0 18.5 0.0057 16.0 18.5 3.0 1 1 2 3 3 3 1 Protein of unknown function (DUF3450) AAA_13 PF13166.6 ORF3672 - 0.0072 15.0 38.9 0.0086 14.8 38.9 1.1 1 0 0 1 1 1 1 AAA domain HSCB_C PF07743.13 ORF3672 - 0.0076 16.7 30.0 0.17 12.4 1.5 4.6 1 1 2 3 3 2 1 HSCB C-terminal oligomerisation domain GAS PF13851.6 ORF3672 - 0.012 14.9 50.3 0.026 13.9 33.4 2.2 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Spc7 PF08317.11 ORF3672 - 0.015 14.2 48.2 0.077 11.9 20.4 2.5 1 1 1 2 2 2 0 Spc7 kinetochore protein ATG16 PF08614.11 ORF3672 - 0.027 14.7 44.6 0.44 10.7 5.6 3.1 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) PKcGMP_CC PF16808.5 ORF3672 - 0.03 14.2 22.8 0.13 12.2 0.4 5.2 5 1 0 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Taxilin PF09728.9 ORF3672 - 0.031 13.5 49.9 0.54 9.4 35.2 2.1 1 1 1 2 2 2 0 Myosin-like coiled-coil protein ERM PF00769.19 ORF3672 - 0.046 13.5 44.5 0.19 11.5 44.5 1.8 1 1 0 1 1 1 0 Ezrin/radixin/moesin family DUF1664 PF07889.12 ORF3672 - 0.18 11.8 32.4 0.13 12.3 9.8 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.12 ORF3672 - 0.22 11.6 51.2 2.5 8.2 25.1 3.2 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein BLOC1_2 PF10046.9 ORF3672 - 0.3 11.4 42.1 0.11 12.8 15.9 3.4 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF948 PF06103.11 ORF3672 - 0.31 11.3 21.2 0.088 13.1 4.3 3.5 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF4200 PF13863.6 ORF3672 - 0.34 11.3 51.3 0.41 11.1 4.2 3.8 1 1 3 4 4 4 0 Domain of unknown function (DUF4200) HOOK PF05622.12 ORF3672 - 0.38 8.9 47.2 0.23 9.6 22.2 2.1 1 1 1 2 2 2 0 HOOK protein APG6_N PF17675.1 ORF3672 - 0.41 11.2 52.7 0.56 10.7 11.3 2.8 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF4407 PF14362.6 ORF3672 - 0.42 9.9 33.9 0.14 11.5 24.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) CENP-F_leu_zip PF10473.9 ORF3672 - 0.48 10.4 48.5 0.52 10.3 24.6 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 OmpH PF03938.14 ORF3672 - 0.54 10.6 50.4 9.8 6.5 31.3 2.7 1 1 1 2 2 1 0 Outer membrane protein (OmpH-like) MAD PF05557.13 ORF3672 - 0.67 8.2 45.4 0.93 7.8 45.4 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein Baculo_PEP_C PF04513.12 ORF3672 - 0.68 10.0 24.4 0.49 10.4 4.9 3.1 1 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus TMPIT PF07851.13 ORF3672 - 0.87 8.8 38.3 0.042 13.1 12.1 2.3 1 1 1 2 2 2 0 TMPIT-like protein HrpB7 PF09486.10 ORF3672 - 0.96 9.8 17.4 0.47 10.8 8.0 2.6 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) EzrA PF06160.12 ORF3672 - 0.96 7.5 46.5 0.47 8.6 13.1 2.3 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA SlyX PF04102.12 ORF3672 - 1.5 9.4 33.0 1.6 9.4 6.6 4.2 1 1 3 4 4 4 0 SlyX CENP-H PF05837.12 ORF3672 - 2 8.8 42.1 2.1 8.8 18.5 3.1 1 1 2 3 3 3 0 Centromere protein H (CENP-H) DUF5082 PF16888.5 ORF3672 - 2.3 8.5 41.5 0.98 9.7 7.5 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF5082) FliJ PF02050.16 ORF3672 - 2.7 8.2 38.0 1.7 8.9 19.7 3.2 1 1 2 3 3 3 0 Flagellar FliJ protein DHR10 PF18595.1 ORF3672 - 3 7.9 47.8 1.4 9.0 12.4 3.3 1 1 2 3 3 3 0 Designed helical repeat protein 10 domain Prominin PF05478.11 ORF3672 - 3 5.7 30.6 8.4 4.2 9.8 1.8 1 1 0 1 1 1 0 Prominin DUF3584 PF12128.8 ORF3672 - 3 5.2 42.0 6.1 4.2 42.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) DUF4201 PF13870.6 ORF3672 - 3.2 7.4 46.0 0.79 9.4 39.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) DUF641 PF04859.12 ORF3672 - 3.3 8.1 36.3 0.54 10.6 6.5 3.8 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) KASH_CCD PF14662.6 ORF3672 - 3.5 7.4 48.9 2.3 8.0 6.5 3.0 1 1 2 3 3 3 0 Coiled-coil region of CCDC155 or KASH IFT57 PF10498.9 ORF3672 - 3.7 6.4 43.7 0.83 8.5 26.0 2.4 1 1 2 3 3 3 0 Intra-flagellar transport protein 57 DUF2968 PF11180.8 ORF3672 - 4 7.0 30.3 2.1 7.9 18.6 2.5 1 1 1 3 3 3 0 Protein of unknown function (DUF2968) DUF848 PF05852.11 ORF3672 - 4.7 7.3 36.9 0.63 10.1 12.7 3.0 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) Jnk-SapK_ap_N PF09744.9 ORF3672 - 4.8 7.4 48.2 3.1 8.0 10.2 3.1 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 TMF_TATA_bd PF12325.8 ORF3672 - 4.8 7.4 43.5 0.95 9.7 13.1 3.3 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding NPV_P10 PF05531.12 ORF3672 - 6.2 7.4 25.6 0.3 11.6 2.1 4.2 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Laminin_II PF06009.12 ORF3672 - 7.1 6.7 30.9 1.2 9.2 4.7 3.1 1 1 1 3 3 3 0 Laminin Domain II Spc29 PF17082.5 ORF3672 - 9.1 6.0 30.9 0.69 9.7 5.5 3.0 1 1 2 3 3 3 0 Spindle Pole Component 29 DrsE PF02635.15 ORF31503 - 0.074 13.4 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 DsrE/DsrF-like family Amidase_3 PF01520.18 ORF30751 - 1.9e-32 112.8 0.0 2.7e-32 112.3 0.0 1.2 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase OmpA PF00691.20 ORF30751 - 0.046 14.1 0.1 0.21 12.0 0.0 2.0 2 0 0 2 2 2 0 OmpA family WD40 PF00400.32 ORF30595 - 3.5e-12 46.6 1.5 0.0033 18.2 0.6 3.5 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF30595 - 3.4e-07 30.5 0.1 0.067 13.5 0.0 4.0 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain DUF4221 PF13970.6 ORF30595 - 0.037 13.6 0.4 6.4 6.2 0.0 2.7 2 1 0 3 3 3 0 Domain of unknown function (DUF4221) WD40_like PF17005.5 ORF30595 - 0.072 12.4 0.1 1.1 8.5 0.0 2.6 1 1 1 2 2 2 0 WD40-like domain Snf7 PF03357.21 ORF24105 - 2.7e-15 56.4 29.0 2.7e-15 56.4 29.0 1.9 1 1 1 2 2 2 2 Snf7 Glyco_hydro_3_C PF01915.22 ORF24105 - 0.055 13.4 1.0 0.068 13.1 1.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain DUF1910 PF08928.10 ORF24105 - 2.5 8.1 9.0 0.19 11.8 2.8 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF1910) THF_DHG_CYH PF00763.23 ORF21626 - 0.15 12.3 0.0 0.33 11.2 0.0 1.6 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SLAIN PF15301.6 ORF19344 - 0.017 14.4 0.1 0.021 14.1 0.1 1.0 1 0 0 1 1 1 0 SLAIN motif-containing family BNIP3 PF06553.12 ORF19344 - 0.021 14.5 2.7 0.037 13.7 2.7 1.4 1 1 0 1 1 1 0 BNIP3 DUF2786 PF10979.8 ORF19344 - 0.051 13.5 0.2 0.11 12.5 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2786) Mem_trans PF03547.18 ORF15548 - 6.2e-07 28.2 0.5 0.0048 15.4 0.0 2.1 1 1 1 2 2 2 2 Membrane transport protein NIR_SIR PF01077.22 ORF14306 - 2.1e-15 56.6 0.1 3.9e-15 55.7 0.0 1.5 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain ABC_membrane PF00664.23 ORF13379 - 1.5e-22 80.6 5.6 1.8e-22 80.3 5.6 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region UDPGT PF00201.18 ORF12210 - 5.9e-11 41.8 0.0 8.3e-11 41.4 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF12210 - 0.0016 18.4 0.0 0.0022 18.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Kinesin PF00225.23 ORF112573 - 1.7e-41 142.3 3.5 3.4e-40 138.0 3.5 2.0 1 1 0 1 1 1 1 Kinesin motor domain DUF5011 PF16403.5 ORF112573 - 0.63 10.2 2.6 1.7 8.8 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF5011) ACT_4 PF13291.6 ORF108429 - 0.13 12.9 0.0 0.19 12.3 0.0 1.2 1 0 0 1 1 1 0 ACT domain Leuk-A4-hydro_C PF09127.11 ORF108291 - 3.5e-26 91.5 0.0 6.5e-26 90.6 0.0 1.4 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Poxvirus_B22R PF04395.12 ORF107611 - 0.11 12.0 0.8 0.15 11.6 0.8 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein V-SNARE_C PF12352.8 ORF106197 - 0.12 12.6 0.1 0.12 12.6 0.1 2.8 4 0 0 4 4 4 0 Snare region anchored in the vesicle membrane C-terminus Metal_resist PF13801.6 ORF106197 - 4.2 7.6 10.3 6.7 6.9 1.0 3.2 3 1 0 3 3 3 0 Heavy-metal resistance Adeno_knob PF00541.17 ORF105822 - 0.022 14.5 0.0 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 Adenoviral fibre protein (knob domain) THF_DHG_CYH PF00763.23 ORF104841 - 0.15 12.3 0.0 0.33 11.2 0.0 1.6 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MORN PF02493.20 ORF104420 - 1e-21 75.5 23.9 3.9e-06 26.4 0.2 6.1 5 1 0 5 5 5 5 MORN repeat DUF3048_C PF17479.2 ORF104420 - 0.00094 19.5 6.8 0.26 11.7 0.2 3.3 1 1 2 3 3 3 2 Protein of unknown function (DUF3048) C-terminal domain TPR_2 PF07719.17 NODE_34471_length_628_cov_3.026981_g27538_i0reverse_frame_1 - 0.00086 19.2 0.0 0.0017 18.3 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_34471_length_628_cov_3.026981_g27538_i0reverse_frame_1 - 0.0059 16.7 0.0 0.015 15.5 0.0 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_34471_length_628_cov_3.026981_g27538_i0reverse_frame_1 - 0.046 14.4 0.1 0.12 13.0 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_34471_length_628_cov_3.026981_g27538_i0reverse_frame_1 - 0.15 12.2 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat Beta-lactamase PF00144.24 NODE_34435_length_628_cov_290.413153_g27503_i0forward_frame_1 - 0.0096 15.2 0.0 0.014 14.6 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase RVT_thumb PF06817.14 NODE_34433_length_628_cov_348.035413_g24284_i2forward_frame_1 - 0.061 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Reverse transcriptase thumb domain UQ_con PF00179.26 NODE_34429_length_628_cov_1106.116358_g27498_i0forward_frame_1 - 2.3e-29 101.8 0.1 3.2e-29 101.4 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RGCC PF15151.6 NODE_34422_length_629_cov_2.925926_g27494_i0reverse_frame_1 - 0.19 11.9 2.0 4.3 7.6 0.0 2.3 2 0 0 2 2 2 0 Response gene to complement 32 protein family B3_4 PF03483.17 NODE_34422_length_629_cov_2.925926_g27494_i0forward_frame_1 - 4.3e-39 134.0 0.0 7.3e-39 133.2 0.0 1.4 2 0 0 2 2 2 1 B3/4 domain B5 PF03484.15 NODE_34422_length_629_cov_2.925926_g27494_i0forward_frame_1 - 2.6e-23 82.1 0.3 4e-23 81.5 0.3 1.3 1 0 0 1 1 1 1 tRNA synthetase B5 domain PhetRS_B1 PF18262.1 NODE_34422_length_629_cov_2.925926_g27494_i0forward_frame_1 - 0.006 16.8 0.0 0.011 16.0 0.0 1.4 1 0 0 1 1 1 1 Phe-tRNA synthetase beta subunit B1 domain GlutR_N PF05201.15 NODE_34421_length_629_cov_3.183502_g27493_i0reverse_frame_1 - 1.3e-53 180.6 0.0 1.6e-53 180.4 0.0 1.1 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain RCC1_2 PF13540.6 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 1.1e-06 28.2 7.1 0.22 11.4 0.1 3.8 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat ubiquitin PF00240.23 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 0.0062 16.3 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family PH_TFIIH PF08567.11 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 0.024 15.0 0.1 6.6 7.1 0.0 3.0 3 1 0 3 3 3 0 TFIIH p62 subunit, N-terminal domain Tup_N PF08581.10 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 0.024 14.9 0.0 11 6.4 0.0 3.1 3 0 0 3 3 3 0 Tup N-terminal Rad60-SLD_2 PF13881.6 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 0.037 14.1 0.0 0.082 13.0 0.0 1.6 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like XRCC1_N PF01834.16 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 0.052 13.6 0.1 8.7 6.3 0.0 2.8 1 1 2 3 3 3 0 XRCC1 N terminal domain Spectrin PF00435.21 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 0.1 13.1 0.0 47 4.5 0.0 3.4 4 0 0 4 4 4 0 Spectrin repeat Bep_C_terminal PF17841.1 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 0.21 11.8 2.2 6.1 7.1 0.4 2.9 3 1 0 3 3 2 0 BID domain of Bartonella effector protein (Bep) Kelch_2 PF07646.15 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 0.32 11.1 1.5 48 4.1 0.0 3.5 4 0 0 4 4 4 0 Kelch motif PheRS_DBD2 PF18554.1 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 0.35 10.9 12.5 10 6.2 0.6 3.4 3 0 0 3 3 3 0 PheRS DNA binding domain 2 Phage_holin_7_1 PF16081.5 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_1 - 3.6 7.8 12.1 8.7 6.5 4.7 3.0 1 1 1 2 2 2 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family IQ PF00612.27 NODE_34397_length_629_cov_164.260943_g27217_i1reverse_frame_1 - 8.4e-10 37.6 10.1 0.00013 21.5 0.5 4.9 4 0 0 4 4 4 4 IQ calmodulin-binding motif Herpes_LMP1 PF05297.11 NODE_34391_length_629_cov_424.493266_g27467_i0forward_frame_1 - 1.5 7.9 6.1 2.1 7.5 6.1 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) MFS_1 PF07690.16 NODE_34374_length_630_cov_2.026891_g27454_i0forward_frame_1 - 0.0098 14.9 13.7 0.024 13.5 13.8 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily RCC1_2 PF13540.6 NODE_34303_length_631_cov_226.196309_g27391_i0reverse_frame_2 - 4.7e-10 39.0 9.7 0.086 12.7 0.0 4.6 4 1 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_34303_length_631_cov_226.196309_g27391_i0reverse_frame_2 - 0.033 14.7 0.0 42 4.7 0.0 3.4 4 0 0 4 4 4 0 Spectrin repeat FimA PF16970.5 NODE_34303_length_631_cov_226.196309_g27391_i0reverse_frame_2 - 0.11 12.7 6.0 0.25 11.5 1.4 2.3 1 1 1 2 2 2 0 Type-1 fimbrial protein, A K_channel_TID PF07941.11 NODE_34303_length_631_cov_226.196309_g27391_i0reverse_frame_2 - 5.2 7.6 10.1 2.6 8.6 1.4 3.3 1 1 2 3 3 3 0 Potassium channel Kv1.4 tandem inactivation domain VHP PF02209.19 NODE_34303_length_631_cov_226.196309_g27391_i0forward_frame_3 - 0.086 12.9 5.6 28 4.9 0.3 3.4 3 0 0 3 3 3 0 Villin headpiece domain DUF4794 PF16042.5 NODE_34303_length_631_cov_226.196309_g27391_i0forward_frame_3 - 0.21 12.6 1.9 16 6.6 0.0 3.1 2 2 1 3 3 3 0 Domain of unknown function (DUF4794) Agouti PF05039.12 NODE_34301_length_631_cov_253.179530_g27389_i0reverse_frame_3 - 0.026 15.2 0.9 0.026 15.2 0.9 2.3 2 1 1 3 3 3 0 Agouti protein Ni_hydr_CYTB PF01292.20 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 3.4e-10 39.8 0.1 4.8e-10 39.3 0.1 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 0.0066 16.6 0.2 0.011 15.9 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF4079) DUF2231 PF09990.9 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 0.011 16.2 0.2 0.02 15.3 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Cytochrom_B561 PF03188.16 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 0.026 14.7 0.3 0.032 14.4 0.3 1.3 1 0 0 1 1 1 0 Eukaryotic cytochrome b561 Ferric_reduct PF01794.19 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 0.21 11.7 4.1 0.83 9.8 0.3 2.1 1 1 1 2 2 2 0 Ferric reductase like transmembrane component AbiEi_3 PF11459.8 NODE_34290_length_631_cov_1208.260067_g27378_i0forward_frame_3 - 0.097 12.4 0.2 0.15 11.7 0.2 1.2 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin, Type IV TA system IES5 PF17335.2 NODE_34281_length_632_cov_3.331658_g27373_i0reverse_frame_3 - 0.19 12.0 0.1 0.28 11.4 0.1 1.2 1 0 0 1 1 1 0 Ino80 complex subunit 5 AAA_33 PF13671.6 NODE_34281_length_632_cov_3.331658_g27373_i0reverse_frame_2 - 0.023 14.9 0.1 0.041 14.1 0.1 1.4 1 0 0 1 1 1 0 AAA domain S1 PF00575.23 NODE_34281_length_632_cov_3.331658_g27373_i0forward_frame_2 - 2.1e-35 120.9 6.6 1.6e-20 73.2 0.5 3.1 3 0 0 3 3 3 3 S1 RNA binding domain PCB_OB PF17092.5 NODE_34281_length_632_cov_3.331658_g27373_i0forward_frame_2 - 0.0024 18.6 0.3 0.034 14.9 0.1 2.3 1 1 1 2 2 2 1 Penicillin-binding protein OB-like domain IpaB_EvcA PF03278.13 NODE_34281_length_632_cov_3.331658_g27373_i0forward_frame_2 - 0.064 13.0 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 IpaB/EvcA family RsgI_N PF12791.7 NODE_34281_length_632_cov_3.331658_g27373_i0forward_frame_2 - 0.086 12.8 0.6 1.6 8.7 0.0 2.9 3 0 0 3 3 3 0 Anti-sigma factor N-terminus DUF2418 PF10332.9 NODE_34279_length_632_cov_3.542714_g27371_i0forward_frame_3 - 0.31 11.6 2.1 0.52 10.9 2.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) UPF0524 PF15823.5 NODE_34277_length_632_cov_41.393635_g27369_i0reverse_frame_2 - 1.9 7.8 7.9 2.9 7.2 7.9 1.3 1 0 0 1 1 1 0 UPF0524 of C3orf70 zf-LITAF-like PF10601.9 NODE_34271_length_632_cov_84.959799_g27363_i0forward_frame_2 - 8.4e-05 22.8 0.2 0.00014 22.1 0.2 1.3 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain SAM_KSR1 PF13543.6 NODE_34271_length_632_cov_84.959799_g27363_i0forward_frame_2 - 0.023 14.8 0.0 0.062 13.4 0.0 1.6 2 0 0 2 2 2 0 SAM like domain present in kinase suppressor RAS 1 DUF1285 PF06938.11 NODE_34267_length_632_cov_101.329983_g27186_i1reverse_frame_3 - 0.055 13.5 0.0 0.088 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1285) LXG PF04740.12 NODE_34264_length_632_cov_140.711893_g27357_i0forward_frame_3 - 0.065 12.9 7.5 0.16 11.6 2.8 2.2 1 1 1 2 2 2 0 LXG domain of WXG superfamily DUF3452 PF11934.8 NODE_34264_length_632_cov_140.711893_g27357_i0forward_frame_3 - 0.086 12.4 2.6 0.12 11.9 2.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) DUF948 PF06103.11 NODE_34264_length_632_cov_140.711893_g27357_i0forward_frame_3 - 0.18 12.1 1.4 1.1 9.5 0.0 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) MRPL52 PF18699.1 NODE_34264_length_632_cov_140.711893_g27357_i0forward_frame_3 - 0.24 11.6 4.1 4.2 7.6 2.0 2.3 2 0 0 2 2 2 0 Mitoribosomal protein mL52 Fzo_mitofusin PF04799.13 NODE_34264_length_632_cov_140.711893_g27357_i0forward_frame_3 - 0.36 10.3 3.3 0.73 9.4 0.6 2.1 2 0 0 2 2 2 0 fzo-like conserved region FapA PF03961.13 NODE_34264_length_632_cov_140.711893_g27357_i0forward_frame_3 - 2.4 6.7 8.7 0.23 10.0 3.1 1.8 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF1456 PF07308.13 NODE_34228_length_633_cov_2.550167_g27330_i0reverse_frame_2 - 8.5e-36 122.1 1.3 3.6e-25 88.1 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1456) DUF3587 PF12132.8 NODE_34228_length_633_cov_2.550167_g27330_i0reverse_frame_2 - 0.49 9.8 1.7 0.88 9.0 1.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3587) PmoA PF14100.6 NODE_34220_length_633_cov_55.568562_g27323_i0reverse_frame_3 - 0.21 11.0 0.1 0.27 10.7 0.1 1.1 1 0 0 1 1 1 0 Methane oxygenase PmoA Fzo_mitofusin PF04799.13 NODE_34220_length_633_cov_55.568562_g27323_i0reverse_frame_2 - 0.0054 16.3 0.0 0.0082 15.7 0.0 1.2 1 0 0 1 1 1 1 fzo-like conserved region SARAF PF06682.12 NODE_34220_length_633_cov_55.568562_g27323_i0forward_frame_3 - 0.024 14.3 0.0 0.03 14.0 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Kazal_3 PF18434.1 ORF98635 - 0.085 12.6 0.6 0.2 11.4 0.6 1.6 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain zf-C2H2 PF00096.26 ORF9813 - 6.7e-11 42.0 25.5 5.7e-05 23.3 2.5 3.6 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF9813 - 5.1e-09 36.1 25.5 2.6e-06 27.6 0.8 4.4 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF9813 - 2.7e-06 27.7 29.5 0.00052 20.6 3.1 3.9 4 0 0 4 4 4 3 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF9813 - 0.00012 22.3 9.4 0.025 14.9 0.1 3.5 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 ORF9813 - 0.00089 19.2 0.4 0.00089 19.2 0.4 4.3 4 0 0 4 4 4 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF9813 - 0.022 15.4 7.2 0.042 14.5 2.1 2.5 2 0 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf_UBZ PF18439.1 ORF9813 - 0.028 14.0 4.7 2.5 7.8 0.2 3.0 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-met PF12874.7 ORF9813 - 0.076 13.4 15.1 0.27 11.7 0.1 3.9 3 1 0 3 3 3 0 Zinc-finger of C2H2 type zinc_ribbon_4 PF13717.6 ORF9813 - 0.24 11.4 0.1 0.24 11.4 0.1 3.1 4 0 0 4 4 3 0 zinc-ribbon domain CpXC PF14353.6 ORF9813 - 0.28 11.2 4.8 4.4 7.4 0.9 2.5 1 1 0 2 2 2 0 CpXC protein zf-H2C2_5 PF13909.6 ORF9813 - 0.39 10.5 0.1 0.39 10.5 0.1 4.4 4 0 0 4 4 4 0 C2H2-type zinc-finger domain Zn_Tnp_IS1595 PF12760.7 ORF9813 - 3.2 7.8 13.4 0.09 12.8 4.2 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Fer4_8 PF13183.6 ORF9813 - 3.7 8.1 7.8 0.7 10.4 0.5 2.6 3 0 0 3 3 3 0 4Fe-4S dicluster domain BTB PF00651.31 ORF97456 - 0.098 12.9 0.2 0.18 12.0 0.0 1.6 2 0 0 2 2 2 0 BTB/POZ domain SRP-alpha_N PF04086.13 ORF95255 - 2.9 7.7 10.7 3.4 7.5 10.7 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Presenilin PF01080.17 ORF95255 - 8.7 5.0 6.2 10 4.7 6.2 1.1 1 0 0 1 1 1 0 Presenilin RibD_C PF01872.17 ORF94269 - 0.0042 16.9 2.1 0.0074 16.1 2.1 1.4 1 0 0 1 1 1 1 RibD C-terminal domain PAD PF03068.15 ORF94269 - 0.68 8.9 8.9 0.8 8.6 8.3 1.3 1 1 0 1 1 1 0 Protein-arginine deiminase (PAD) Mod_r PF07200.13 ORF9362 - 2.4e-13 50.4 13.5 3.1e-13 50.1 13.5 1.0 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein Piezo_RRas_bdg PF12166.8 ORF9362 - 0.01 15.2 2.6 0.012 14.9 2.6 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain ECH_2 PF16113.5 ORF9362 - 0.1 12.1 5.3 0.14 11.7 5.3 1.3 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase Muted PF14942.6 ORF9362 - 0.21 12.0 4.2 0.31 11.4 4.2 1.3 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein SRP_SPB PF02978.19 ORF93099 - 2.4 8.8 9.4 0.11 13.1 3.2 1.9 2 0 0 2 2 2 0 Signal peptide binding domain Med26_M PF15694.5 ORF93099 - 4.2 7.4 23.6 0.39 10.7 1.3 2.0 1 1 1 2 2 2 0 Mediator complex subunit 26 middle domain STI1 PF17830.1 ORF92314 - 0.023 14.6 3.7 0.023 14.6 3.7 2.9 2 1 1 3 3 3 0 STI1 domain PCRF PF03462.18 ORF92314 - 0.92 9.3 7.9 1.3 8.9 7.2 1.5 1 1 1 2 2 2 0 PCRF domain Com_YlbF PF06133.11 ORF92314 - 3.7 8.2 12.4 0.82 10.3 4.8 2.1 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA Dor1 PF04124.12 ORF9186 - 0.055 12.1 0.1 0.077 11.7 0.1 1.1 1 0 0 1 1 1 0 Dor1-like family DUF1947 PF09183.10 ORF9186 - 0.064 13.6 0.8 0.13 12.6 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) Yae1_N PF09811.9 ORF9186 - 0.082 12.6 10.9 0.22 11.3 10.8 1.7 1 1 0 1 1 1 0 Essential protein Yae1, N terminal YabA PF06156.13 ORF9186 - 0.13 12.9 1.2 0.21 12.2 0.6 1.8 1 1 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF9186 - 1.2 6.9 3.8 1.3 6.8 3.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cytochrom_B562 PF07361.11 ORF9186 - 6.5 7.5 10.4 0.39 11.4 0.4 2.6 2 1 0 2 2 2 0 Cytochrome b562 EamA PF00892.20 ORF89707 - 1.7e-17 63.9 14.0 2.6e-10 40.6 7.4 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 ORF89707 - 6.2e-07 29.0 1.8 6.2e-07 29.0 1.8 1.4 2 0 0 2 2 2 1 Triose-phosphate Transporter family PAGK PF15284.6 ORF89707 - 0.0063 16.4 1.3 0.097 12.6 0.0 2.7 2 1 1 3 3 3 1 Phage-encoded virulence factor Peptidase_U4 PF03419.13 ORF89707 - 3.6 6.8 9.7 4.4 6.5 9.5 1.3 1 1 0 1 1 1 0 Sporulation factor SpoIIGA DUF155 PF02582.14 ORF88671 - 2e-10 41.1 0.0 2.3e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YagE family COG1723 DUF373 PF04123.13 ORF88366 - 0.94 8.9 13.9 1.2 8.5 13.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) Herpes_LMP1 PF05297.11 ORF88366 - 1.8 7.6 7.2 2.1 7.4 7.2 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) O-antigen_lig PF13425.6 ORF88366 - 1.9 7.2 23.4 2.8 6.6 23.1 1.4 1 1 0 1 1 1 0 O-antigen ligase like membrane protein MARVEL PF01284.23 ORF88366 - 8.3 6.4 13.0 35 4.4 0.4 2.2 1 1 1 2 2 2 0 Membrane-associating domain Ribul_P_3_epim PF00834.19 ORF88003 - 1.4e-74 249.8 0.0 1.6e-74 249.6 0.0 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family TMP-TENI PF02581.17 ORF88003 - 0.11 11.8 0.1 0.16 11.2 0.1 1.3 1 0 0 1 1 1 0 Thiamine monophosphate synthase BPD_transp_1 PF00528.22 ORF86989 - 5.2e-29 101.3 12.0 7e-29 100.9 12.0 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DUF3638 PF12340.8 ORF86989 - 0.051 12.9 0.0 0.095 12.0 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3638) DUF3169 PF11368.8 ORF86989 - 0.87 9.0 4.3 1.6 8.1 4.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) NIF PF03031.18 ORF854 - 6.7e-43 146.2 0.1 8.4e-43 145.8 0.1 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Methyltransf_3 PF01596.17 ORF84866 - 2.8e-61 206.4 0.1 3.3e-61 206.2 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF84866 - 3e-11 44.3 0.0 4.3e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF84866 - 1.1e-06 28.5 0.0 2.9e-06 27.2 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 ORF84866 - 0.00051 19.9 0.0 0.00076 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 ORF84866 - 0.0029 18.3 0.0 0.0062 17.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF84866 - 0.01 15.2 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF84866 - 0.027 13.8 0.0 0.034 13.4 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DUF4217 PF13959.6 ORF83473 - 7.3e-16 58.2 0.0 1.7e-15 57.0 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) DUF4228 PF14009.6 ORF83473 - 0.011 16.2 2.5 0.015 15.7 2.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4228) RNA_pol_Rpc4 PF05132.14 ORF83473 - 2.2 8.7 9.5 2.1 8.7 8.7 1.4 1 1 0 1 1 1 0 RNA polymerase III RPC4 Borrelia_P83 PF05262.11 ORF83473 - 5.8 5.3 17.4 6.8 5.1 17.4 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Neur_chan_memb PF02932.16 ORF83473 - 7.6 6.5 5.9 9.3 6.2 5.9 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks93.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks93.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks93.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks93.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- 5_3_exonuc PF01367.20 ORF80631 - 8.8e-06 26.2 0.5 2.2e-05 25.0 0.0 1.8 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_2 PF12826.7 ORF80631 - 0.016 15.3 0.0 0.072 13.2 0.0 2.1 2 0 0 2 2 2 0 Helix-hairpin-helix motif Toxin-deaminase PF14424.6 ORF79308 - 0.016 15.3 0.0 0.022 14.9 0.0 1.2 1 0 0 1 1 1 0 The BURPS668_1122 family of deaminases zf-C2H2 PF00096.26 ORF77320 - 6.7e-11 42.0 25.5 5.7e-05 23.3 2.5 3.6 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF77320 - 5.1e-09 36.1 25.5 2.6e-06 27.6 0.8 4.4 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF77320 - 2.7e-06 27.7 29.5 0.00052 20.6 3.1 3.9 4 0 0 4 4 4 3 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF77320 - 0.00012 22.3 9.4 0.025 14.9 0.1 3.5 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 ORF77320 - 0.00089 19.2 0.4 0.00089 19.2 0.4 4.3 4 0 0 4 4 4 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF77320 - 0.022 15.4 7.2 0.042 14.5 2.1 2.5 2 0 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf_UBZ PF18439.1 ORF77320 - 0.028 14.0 4.7 2.5 7.8 0.2 3.0 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-met PF12874.7 ORF77320 - 0.076 13.4 15.1 0.27 11.7 0.1 3.9 3 1 0 3 3 3 0 Zinc-finger of C2H2 type zinc_ribbon_4 PF13717.6 ORF77320 - 0.24 11.4 0.1 0.24 11.4 0.1 3.1 4 0 0 4 4 3 0 zinc-ribbon domain CpXC PF14353.6 ORF77320 - 0.28 11.2 4.8 4.4 7.4 0.9 2.5 1 1 0 2 2 2 0 CpXC protein zf-H2C2_5 PF13909.6 ORF77320 - 0.39 10.5 0.1 0.39 10.5 0.1 4.4 4 0 0 4 4 4 0 C2H2-type zinc-finger domain Zn_Tnp_IS1595 PF12760.7 ORF77320 - 3.2 7.8 13.4 0.09 12.8 4.2 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Fer4_8 PF13183.6 ORF77320 - 3.7 8.1 7.8 0.7 10.4 0.5 2.6 3 0 0 3 3 3 0 4Fe-4S dicluster domain Thx PF17070.5 ORF7619 - 0.00039 20.4 0.6 0.00082 19.4 0.3 1.7 2 0 0 2 2 2 1 30S ribosomal protein Thx RPS31 PF17067.5 ORF7619 - 0.029 14.5 0.2 0.052 13.7 0.2 1.4 1 0 0 1 1 1 0 Ribosomal protein S31e Dor1 PF04124.12 ORF75158 - 0.055 12.1 0.1 0.077 11.7 0.1 1.1 1 0 0 1 1 1 0 Dor1-like family DUF1947 PF09183.10 ORF75158 - 0.064 13.6 0.8 0.13 12.6 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) Yae1_N PF09811.9 ORF75158 - 0.082 12.6 10.9 0.22 11.3 10.8 1.7 1 1 0 1 1 1 0 Essential protein Yae1, N terminal YabA PF06156.13 ORF75158 - 0.13 12.9 1.2 0.21 12.2 0.6 1.8 1 1 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF75158 - 1.2 6.9 3.8 1.3 6.8 3.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cytochrom_B562 PF07361.11 ORF75158 - 6.5 7.5 10.4 0.39 11.4 0.4 2.6 2 1 0 2 2 2 0 Cytochrome b562 Lebercilin PF15619.6 ORF734 - 0.00057 19.6 15.4 0.011 15.4 5.0 2.5 2 0 0 2 2 2 2 Ciliary protein causing Leber congenital amaurosis disease DNA_pol3_gamma3 PF12169.8 ORF734 - 0.017 15.1 0.1 0.028 14.3 0.1 1.3 1 0 0 1 1 1 0 DNA polymerase III subunits gamma and tau domain III OKR_DC_1 PF01276.20 ORF734 - 0.02 13.6 0.3 0.022 13.5 0.3 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Ribosomal_L29 PF00831.23 ORF734 - 0.029 14.3 0.2 0.029 14.3 0.2 3.1 3 1 0 3 3 3 0 Ribosomal L29 protein SlyX PF04102.12 ORF734 - 0.48 11.1 5.5 0.94 10.1 2.0 2.7 2 0 0 2 2 2 0 SlyX Fzo_mitofusin PF04799.13 ORF734 - 1.1 8.8 11.7 2.8 7.5 2.1 2.3 2 0 0 2 2 2 0 fzo-like conserved region T3SSipB PF16535.5 ORF734 - 1.3 9.5 7.3 1.1 9.7 2.5 2.2 1 1 0 2 2 2 0 Type III cell invasion protein SipB TMF_DNA_bd PF12329.8 ORF734 - 3.1 7.8 17.7 0.22 11.5 3.8 3.1 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Latarcin PF10279.9 ORF734 - 3.2 8.2 14.7 68 4.0 13.6 2.6 1 1 0 1 1 1 0 Latarcin precursor Noelin-1 PF12308.8 ORF734 - 3.5 7.7 9.7 0.31 11.0 0.8 2.5 2 1 0 2 2 2 0 Neurogenesis glycoprotein TRAF_BIRC3_bd PF16673.5 ORF734 - 4.6 7.1 12.0 0.08 12.7 1.2 3.1 3 1 1 4 4 4 0 TNF receptor-associated factor BIRC3 binding domain ABC_tran PF00005.27 ORF73359 - 7.9e-18 65.3 0.0 1e-17 64.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF73359 - 0.0014 18.1 0.0 0.0014 18.1 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain BCA_ABC_TP_C PF12399.8 ORF73359 - 0.019 14.9 0.1 0.041 13.8 0.1 1.6 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter HD PF01966.22 ORF73359 - 0.21 11.8 0.6 0.65 10.2 0.6 1.8 2 0 0 2 2 2 0 HD domain Snf7 PF03357.21 ORF72539 - 5.7e-15 55.3 25.8 7.9e-15 54.9 25.6 1.3 1 1 0 1 1 1 1 Snf7 UPF0261 PF06792.11 ORF72539 - 0.012 14.6 0.3 0.018 14.0 0.2 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0261) SirA PF10747.9 ORF72539 - 0.082 13.2 4.6 0.38 11.1 4.6 2.1 1 1 0 1 1 1 0 Sporulation inhibitor of replication protein SirA Dor1 PF04124.12 ORF72160 - 0.055 12.1 0.1 0.077 11.7 0.1 1.1 1 0 0 1 1 1 0 Dor1-like family DUF1947 PF09183.10 ORF72160 - 0.064 13.6 0.8 0.13 12.6 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) Yae1_N PF09811.9 ORF72160 - 0.082 12.6 10.9 0.22 11.3 10.8 1.7 1 1 0 1 1 1 0 Essential protein Yae1, N terminal YabA PF06156.13 ORF72160 - 0.13 12.9 1.2 0.21 12.2 0.6 1.8 1 1 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF72160 - 1.2 6.9 3.8 1.3 6.8 3.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cytochrom_B562 PF07361.11 ORF72160 - 6.5 7.5 10.4 0.39 11.4 0.4 2.6 2 1 0 2 2 2 0 Cytochrome b562 RibD_C PF01872.17 ORF72020 - 0.0042 16.9 2.1 0.0074 16.1 2.1 1.4 1 0 0 1 1 1 1 RibD C-terminal domain PAD PF03068.15 ORF72020 - 0.68 8.9 8.9 0.8 8.6 8.3 1.3 1 1 0 1 1 1 0 Protein-arginine deiminase (PAD) DUF3584 PF12128.8 ORF69050 - 0.021 12.4 12.1 0.027 12.0 12.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Rootletin PF15035.6 ORF69050 - 0.027 14.5 4.6 0.027 14.5 4.6 2.3 2 1 1 3 3 3 0 Ciliary rootlet component, centrosome cohesion Golgin_A5 PF09787.9 ORF69050 - 0.057 12.9 16.5 0.089 12.2 16.5 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF489 PF04356.12 ORF69050 - 0.089 12.8 1.2 0.13 12.3 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) TPR_MLP1_2 PF07926.12 ORF69050 - 0.097 12.7 18.7 0.21 11.7 18.7 1.5 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF4250 PF14056.6 ORF69050 - 0.34 10.9 9.6 0.98 9.4 1.8 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) DUF5401 PF17380.2 ORF69050 - 0.49 8.4 14.4 0.6 8.1 14.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Phage_Mu_Gam PF07352.12 ORF69050 - 1 9.2 18.4 0.11 12.4 3.4 3.2 1 1 2 3 3 3 0 Bacteriophage Mu Gam like protein bZIP_1 PF00170.21 ORF69050 - 1.3 9.1 21.1 0.41 10.8 1.1 3.4 1 1 2 3 3 3 0 bZIP transcription factor GvpK PF05121.12 ORF69050 - 1.6 8.8 5.2 2.1 8.5 0.6 2.5 1 1 0 2 2 2 0 Gas vesicle protein K PIN_8 PF18476.1 ORF69050 - 1.7 8.4 16.4 3.7 7.4 0.1 2.3 1 1 1 2 2 2 0 PIN like domain Jnk-SapK_ap_N PF09744.9 ORF69050 - 2.1 8.6 20.8 5.5 7.2 20.8 1.8 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Uso1_p115_C PF04871.13 ORF69050 - 3.2 8.2 21.7 13 6.2 21.7 1.9 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region YlqD PF11068.8 ORF69050 - 3.4 8.0 16.5 15 5.9 13.3 2.4 1 1 1 2 2 2 0 YlqD protein BST2 PF16716.5 ORF66381 - 4.3e-05 24.0 7.9 4.3e-05 24.0 7.9 2.3 1 1 1 2 2 2 1 Bone marrow stromal antigen 2 Fez1 PF06818.15 ORF66381 - 6.1e-05 23.6 15.0 6.1e-05 23.6 15.0 1.9 1 1 1 2 2 2 1 Fez1 DUF4201 PF13870.6 ORF66381 - 0.00043 20.0 16.6 0.0031 17.3 15.1 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) Spc7 PF08317.11 ORF66381 - 0.0007 18.6 14.4 0.0007 18.6 14.4 2.1 1 1 1 2 2 2 1 Spc7 kinetochore protein kleA_kleC PF17383.2 ORF66381 - 0.0012 19.1 11.6 0.013 15.9 3.8 2.4 1 1 1 2 2 2 1 Uncharacterized KorC regulated protein A Csm1_N PF18504.1 ORF66381 - 0.0014 18.9 20.7 0.83 10.0 3.7 4.4 1 1 2 4 4 4 1 Csm1 N-terminal domain HMMR_N PF15905.5 ORF66381 - 0.0015 18.1 19.1 0.002 17.7 19.1 1.3 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal FlxA PF14282.6 ORF66381 - 0.002 18.1 14.0 0.002 18.1 14.0 2.5 1 1 2 3 3 3 2 FlxA-like protein ATG16 PF08614.11 ORF66381 - 0.0024 18.1 22.1 0.015 15.6 10.3 2.2 1 1 1 2 2 2 1 Autophagy protein 16 (ATG16) TACC_C PF05010.14 ORF66381 - 0.0028 17.5 16.5 0.006 16.4 16.3 1.8 1 1 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal AAA_13 PF13166.6 ORF66381 - 0.0033 16.1 8.6 0.0033 16.1 8.6 2.0 1 1 1 2 2 2 1 AAA domain Prefoldin PF02996.17 ORF66381 - 0.0051 16.7 4.0 0.0051 16.7 4.0 3.6 1 1 3 4 4 4 1 Prefoldin subunit Atg14 PF10186.9 ORF66381 - 0.0051 15.9 23.5 0.0075 15.4 9.3 2.1 1 1 1 2 2 2 1 Vacuolar sorting 38 and autophagy-related subunit 14 Paralemmin PF03285.15 ORF66381 - 0.0055 16.3 3.5 0.0055 16.3 3.5 2.1 1 1 1 2 2 2 1 Paralemmin YscO PF07321.12 ORF66381 - 0.0077 16.2 19.3 0.0077 16.2 19.3 1.5 1 1 0 1 1 1 1 Type III secretion protein YscO Tropomyosin_1 PF12718.7 ORF66381 - 0.0088 16.2 24.9 0.013 15.6 24.9 1.3 1 0 0 1 1 1 1 Tropomyosin like Fib_alpha PF08702.10 ORF66381 - 0.012 15.8 15.5 0.017 15.3 14.3 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Lebercilin PF15619.6 ORF66381 - 0.013 15.1 22.9 0.024 14.3 5.1 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Seryl_tRNA_N PF02403.22 ORF66381 - 0.019 15.2 20.3 0.12 12.6 10.4 2.4 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF641 PF04859.12 ORF66381 - 0.02 15.2 17.4 0.55 10.6 8.3 2.5 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Filament PF00038.21 ORF66381 - 0.023 14.3 19.3 0.12 11.9 8.3 2.1 1 1 1 2 2 2 0 Intermediate filament protein TMPIT PF07851.13 ORF66381 - 0.026 13.8 11.1 0.036 13.3 10.7 1.4 1 1 0 1 1 1 0 TMPIT-like protein Histone_HNS PF00816.21 ORF66381 - 0.029 15.2 11.2 0.029 15.2 11.2 2.9 1 1 1 2 2 2 0 H-NS histone family Golgin_A5 PF09787.9 ORF66381 - 0.04 13.4 21.4 0.052 13.0 21.4 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DHR10 PF18595.1 ORF66381 - 0.049 13.7 25.1 0.18 11.9 11.9 3.0 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain FUSC PF04632.12 ORF66381 - 0.055 12.0 2.5 0.058 11.9 2.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family HOOK PF05622.12 ORF66381 - 0.07 11.3 19.6 0.1 10.7 19.6 1.3 1 0 0 1 1 1 0 HOOK protein HCMV_UL139 PF12507.8 ORF66381 - 0.071 13.5 5.8 0.27 11.6 5.8 1.9 1 1 0 1 1 1 0 Human Cytomegalovirus UL139 protein DUF5082 PF16888.5 ORF66381 - 0.074 13.3 18.8 1.2 9.4 11.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) ADIP PF11559.8 ORF66381 - 0.079 13.0 19.2 0.22 11.6 16.0 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding ERM PF00769.19 ORF66381 - 0.08 12.8 23.7 0.36 10.6 23.8 1.8 1 1 0 1 1 1 0 Ezrin/radixin/moesin family HIP1_clath_bdg PF16515.5 ORF66381 - 0.088 13.4 15.9 4.5 8.0 9.2 2.9 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 HrpB7 PF09486.10 ORF66381 - 0.09 13.2 19.6 0.29 11.5 6.6 3.0 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) NPV_P10 PF05531.12 ORF66381 - 0.091 13.2 12.6 2.1 8.9 6.4 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein TMF_DNA_bd PF12329.8 ORF66381 - 0.091 12.8 19.6 0.37 10.8 8.3 2.9 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Mod_r PF07200.13 ORF66381 - 0.096 12.8 17.9 1.4 9.0 9.2 2.4 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein V-SNARE PF05008.15 ORF66381 - 0.11 12.9 13.3 0.049 14.0 9.4 2.5 1 1 2 3 3 1 0 Vesicle transport v-SNARE protein N-terminus Noelin-1 PF12308.8 ORF66381 - 0.11 12.5 4.6 0.076 13.0 1.7 2.1 1 1 1 2 2 2 0 Neurogenesis glycoprotein Wtap PF17098.5 ORF66381 - 0.11 12.4 10.1 0.089 12.7 4.8 2.3 1 1 1 2 2 2 0 WTAP/Mum2p family DUF2968 PF11180.8 ORF66381 - 0.12 12.0 16.0 0.18 11.5 16.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Sec16 PF12932.7 ORF66381 - 0.14 12.7 3.0 0.56 10.8 3.0 2.1 1 1 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region DUF3552 PF12072.8 ORF66381 - 0.15 11.5 24.8 0.45 9.9 6.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) DUF4407 PF14362.6 ORF66381 - 0.16 11.3 17.7 0.48 9.7 17.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4795 PF16043.5 ORF66381 - 0.17 11.5 14.2 0.27 10.8 14.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) FPP PF05911.11 ORF66381 - 0.29 9.3 17.0 0.32 9.1 17.0 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil CC2-LZ PF16516.5 ORF66381 - 0.29 11.5 17.2 0.22 11.9 6.9 3.2 1 1 3 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DivIC PF04977.15 ORF66381 - 0.29 10.9 24.4 0.43 10.4 1.8 3.5 1 1 2 3 3 3 0 Septum formation initiator HemX PF04375.14 ORF66381 - 0.3 10.3 16.2 0.23 10.7 1.5 2.1 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF2730 PF10805.8 ORF66381 - 0.31 11.2 9.4 0.14 12.2 2.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Prefoldin_2 PF01920.20 ORF66381 - 0.34 10.9 21.8 3.3 7.7 3.6 3.8 1 1 2 3 3 3 0 Prefoldin subunit Fmp27_WPPW PF10359.9 ORF66381 - 0.37 9.6 16.6 0.09 11.6 12.2 1.7 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain TolA_bind_tri PF16331.5 ORF66381 - 0.37 10.9 15.5 0.23 11.6 5.9 2.9 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF3138 PF11336.8 ORF66381 - 0.38 9.3 1.3 0.52 8.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) TMF_TATA_bd PF12325.8 ORF66381 - 0.46 10.7 18.6 0.067 13.4 11.2 2.4 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding Phage_GP20 PF06810.11 ORF66381 - 0.51 10.1 16.5 4.1 7.2 3.3 2.6 1 1 1 2 2 2 0 Phage minor structural protein GP20 Laminin_II PF06009.12 ORF66381 - 0.52 10.3 12.4 0.17 11.9 4.2 2.2 1 1 1 2 2 2 0 Laminin Domain II DUF3818 PF12825.7 ORF66381 - 0.62 9.0 9.5 0.85 8.6 9.5 1.2 1 0 0 1 1 1 0 Domain of unknown function in PX-proteins (DUF3818) DUF948 PF06103.11 ORF66381 - 0.62 10.4 4.2 2.2 8.6 4.1 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) LUC7 PF03194.15 ORF66381 - 0.64 9.6 12.5 0.84 9.2 12.5 1.2 1 0 0 1 1 1 0 LUC7 N_terminus DUF3584 PF12128.8 ORF66381 - 0.83 7.1 20.8 0.99 6.8 20.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) YkyA PF10368.9 ORF66381 - 0.96 9.1 20.0 2.1 8.0 19.5 1.8 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein RNA_pol_Rpb1_1 PF04997.12 ORF66381 - 0.97 8.7 8.4 1.5 8.1 8.4 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 1 DUF16 PF01519.16 ORF66381 - 0.99 9.9 16.9 0.99 9.9 6.2 2.4 1 1 1 2 2 2 0 Protein of unknown function DUF16 GrpE PF01025.19 ORF66381 - 1.1 9.0 18.8 2 8.0 5.9 2.4 1 1 1 2 2 2 0 GrpE Phage_GPO PF05929.11 ORF66381 - 1.1 8.9 10.0 2 8.0 10.0 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase BLOC1_2 PF10046.9 ORF66381 - 1.2 9.5 16.4 0.42 11.0 10.3 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 ORF66381 - 1.2 9.2 13.0 8.6 6.4 11.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Spectrin PF00435.21 ORF66381 - 1.2 9.6 18.2 1.4 9.4 9.0 2.4 1 1 1 2 2 2 0 Spectrin repeat DASH_Spc34 PF08657.10 ORF66381 - 1.4 8.6 18.0 0.56 10.0 14.7 1.8 1 1 1 2 2 2 0 DASH complex subunit Spc34 Prominin PF05478.11 ORF66381 - 1.4 6.8 7.7 1.8 6.5 7.7 1.1 1 0 0 1 1 1 0 Prominin UPF0242 PF06785.11 ORF66381 - 1.8 8.7 23.5 4.2 7.4 23.2 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Spc29 PF17082.5 ORF66381 - 2.1 8.1 15.6 2.4 8.0 6.5 2.2 1 1 1 2 2 2 0 Spindle Pole Component 29 DUF3450 PF11932.8 ORF66381 - 2.4 7.4 21.9 0.3 10.4 12.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) T3SSipB PF16535.5 ORF66381 - 2.6 8.5 13.5 3.8 8.0 12.6 1.6 1 1 1 2 2 2 0 Type III cell invasion protein SipB TPD52 PF04201.15 ORF66381 - 2.9 7.5 15.3 1.6 8.3 1.6 2.4 1 1 1 2 2 2 0 Tumour protein D52 family DUF2203 PF09969.9 ORF66381 - 3 8.6 14.7 0.4 11.4 5.1 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) CSN5_C PF18323.1 ORF66381 - 3.4 8.7 7.8 1.3e+02 3.6 7.8 2.3 1 1 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain USP8_interact PF08941.10 ORF66381 - 3.4 7.5 10.9 5.7 6.7 4.7 2.2 1 1 1 2 2 2 0 USP8 interacting Med9 PF07544.13 ORF66381 - 3.6 7.7 19.2 1.6 8.8 7.6 3.2 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF2937 PF11157.8 ORF66381 - 4.3 7.0 5.4 17 5.1 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2937) FliJ PF02050.16 ORF66381 - 4.4 7.5 23.9 8.1 6.7 20.8 2.4 1 1 1 2 2 2 0 Flagellar FliJ protein Vfa1 PF08432.10 ORF66381 - 4.8 7.5 13.7 6.7 7.0 13.7 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF4140 PF13600.6 ORF66381 - 5.4 7.5 21.7 6 7.4 2.2 3.5 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) Exonuc_VII_L PF02601.15 ORF66381 - 6.2 6.3 13.8 9.5 5.7 13.5 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit bZIP_1 PF00170.21 ORF66381 - 6.8 6.9 16.9 0.24 11.5 0.9 4.1 1 1 4 5 5 5 0 bZIP transcription factor DUF724 PF05266.14 ORF66381 - 6.8 6.5 20.3 0.26 11.1 9.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) APG6_N PF17675.1 ORF66381 - 7.1 7.2 25.8 69 4.0 24.3 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region Macoilin PF09726.9 ORF66381 - 8 4.9 16.6 9.7 4.6 16.6 1.1 1 0 0 1 1 1 0 Macoilin family ISG65-75 PF11727.8 ORF66381 - 8.5 5.5 17.8 0.32 10.2 9.5 1.9 1 1 1 2 2 2 0 Invariant surface glycoprotein FAM76 PF16046.5 ORF66381 - 9.2 5.5 17.2 0.6 9.4 5.4 2.1 1 1 1 2 2 2 0 FAM76 protein Adaptin_N PF01602.20 ORF66235 - 1.5e-33 116.2 1.3 1.8e-33 115.9 1.3 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF66235 - 7.3e-06 26.1 3.1 3.6e-05 23.9 0.1 2.3 2 1 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 ORF66235 - 0.012 16.0 0.0 0.083 13.3 0.0 2.0 2 0 0 2 2 2 0 HEAT repeats DUF1390 PF07150.11 ORF66235 - 0.033 13.9 1.2 0.052 13.3 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1390) MA3 PF02847.17 ORF66235 - 0.046 13.7 0.2 0.086 12.8 0.2 1.7 1 1 0 1 1 1 0 MA3 domain HEAT PF02985.22 ORF66235 - 0.048 13.9 0.0 0.95 9.9 0.0 2.9 3 0 0 3 3 3 0 HEAT repeat DUF4238 PF14022.6 ORF65386 - 0.043 13.3 12.8 0.064 12.8 12.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4238) V_ATPase_I PF01496.19 ORF65386 - 0.12 10.2 13.6 0.15 9.9 13.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FliD_N PF02465.18 ORF65386 - 0.57 10.9 6.7 1.9 9.2 5.1 2.4 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus PRKG1_interact PF15898.5 ORF65386 - 1.9 9.4 23.0 11 6.9 18.4 2.8 2 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain EF-G-binding_N PF07299.11 ORF65386 - 4.9 7.8 11.7 0.2 12.2 0.7 3.2 2 1 0 3 3 3 0 Elongation factor G-binding protein, N-terminal Esterase PF00756.20 ORF64574 - 0.029 14.0 0.0 0.039 13.6 0.0 1.2 1 0 0 1 1 1 0 Putative esterase Abhydrolase_6 PF12697.7 ORF64574 - 0.047 14.3 1.6 0.12 12.9 0.2 1.9 1 1 0 1 1 1 0 Alpha/beta hydrolase family AXE1 PF05448.12 ORF64574 - 0.074 11.7 0.0 0.11 11.2 0.0 1.3 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Ribosomal_L18A PF01775.17 ORF64178 - 0.043 13.9 1.1 0.043 13.9 1.1 1.9 2 0 0 2 2 2 0 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A ABC_tran_Xtn PF12848.7 ORF64178 - 0.11 12.5 4.7 0.14 12.2 2.9 2.1 1 1 1 2 2 2 0 ABC transporter YqzE PF14038.6 ORF64178 - 0.13 12.2 2.0 0.17 11.9 0.1 2.2 2 0 0 2 2 2 0 YqzE-like protein Phg_2220_C PF09524.10 ORF64178 - 0.72 10.0 6.3 1.4 9.1 0.3 3.4 2 1 1 3 3 3 0 Conserved phage C-terminus (Phg_2220_C) Trypan_PARP PF05887.11 ORF62131 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF62131 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Pkinase PF00069.25 ORF61514 - 1.4e-10 41.0 0.5 2.4e-10 40.2 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain DUF1664 PF07889.12 ORF61514 - 0.0011 19.0 3.8 0.002 18.1 3.8 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Pkinase_Tyr PF07714.17 ORF61514 - 0.0012 18.2 0.0 0.0023 17.3 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase Rab5-bind PF09311.11 ORF61514 - 0.026 13.9 7.5 0.038 13.4 7.5 1.2 1 0 0 1 1 1 0 Rabaptin-like protein Lys-AminoMut_A PF09043.11 ORF61514 - 0.041 12.4 0.5 0.054 12.0 0.5 1.0 1 0 0 1 1 1 0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Atg14 PF10186.9 ORF61514 - 0.06 12.4 3.0 0.083 12.0 3.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 KDZ PF18758.1 ORF61514 - 0.076 12.6 0.2 0.11 12.0 0.2 1.3 1 0 0 1 1 1 0 Kyakuja-Dileera-Zisupton transposase GrpE PF01025.19 ORF61514 - 0.18 11.5 5.0 0.25 11.0 5.0 1.3 1 0 0 1 1 1 0 GrpE DUF3450 PF11932.8 ORF61514 - 0.19 11.0 5.9 0.26 10.6 5.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF848 PF05852.11 ORF61514 - 0.53 10.4 6.0 0.83 9.7 6.0 1.3 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Macoilin PF09726.9 ORF61514 - 1.1 7.8 8.5 1.4 7.4 8.5 1.1 1 0 0 1 1 1 0 Macoilin family TMPIT PF07851.13 ORF61514 - 1.9 7.6 4.1 2.7 7.2 4.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF1977 PF09320.11 ORF61514 - 2.7 8.3 5.9 38 4.6 5.9 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF1977) TetR_C_4 PF08359.11 ORF58908 - 0.072 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region Flavin_Reduct PF01613.18 ORF57542 - 4.2e-19 69.1 0.0 6e-19 68.6 0.0 1.2 1 0 0 1 1 1 1 Flavin reductase like domain DUF192 PF02643.15 ORF57390 - 3.7e-27 94.3 0.0 5.2e-27 93.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 Mod_r PF07200.13 ORF57124 - 2.4e-13 50.4 13.5 3.1e-13 50.1 13.5 1.0 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein Piezo_RRas_bdg PF12166.8 ORF57124 - 0.01 15.2 2.6 0.012 14.9 2.6 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain ECH_2 PF16113.5 ORF57124 - 0.1 12.1 5.3 0.14 11.7 5.3 1.3 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase Muted PF14942.6 ORF57124 - 0.21 12.0 4.2 0.31 11.4 4.2 1.3 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Pre-SET PF05033.16 ORF57107 - 1.8 9.2 7.3 0.91 10.2 1.6 2.5 2 1 0 2 2 2 0 Pre-SET motif Lipase_3 PF01764.25 ORF56284 - 4.4e-29 101.2 0.0 5.5e-29 100.9 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) Esterase PF00756.20 ORF56284 - 0.0021 17.8 0.0 0.0036 17.0 0.0 1.3 1 0 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 ORF56284 - 0.024 13.9 0.0 0.035 13.4 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF56284 - 0.03 13.9 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Abhydrolase_6 PF12697.7 ORF56284 - 0.041 14.5 0.0 0.041 14.5 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF56284 - 0.062 12.9 0.0 0.12 12.0 0.0 1.4 1 1 0 1 1 1 0 alpha/beta hydrolase fold UPF0227 PF05728.12 ORF56284 - 0.16 11.9 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) DUF4100 PF13352.6 ORF55350 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) DUF3586 PF12131.8 ORF54785 - 0.13 12.5 15.5 0.81 9.9 5.3 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3586) DUF4100 PF13352.6 ORF52252 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) Golgin_A5 PF09787.9 ORF5211 - 0.0023 17.5 15.8 0.0027 17.2 15.8 1.3 1 0 0 1 1 1 1 Golgin subfamily A member 5 DUF3584 PF12128.8 ORF5211 - 0.0095 13.5 14.4 0.01 13.4 14.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF489 PF04356.12 ORF5211 - 0.013 15.6 3.7 0.018 15.0 3.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) Rootletin PF15035.6 ORF5211 - 0.027 14.5 4.6 0.027 14.5 4.6 2.7 2 1 1 3 3 3 0 Ciliary rootlet component, centrosome cohesion DUF4250 PF14056.6 ORF5211 - 0.26 11.3 9.5 0.9 9.5 1.7 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) TPR_MLP1_2 PF07926.12 ORF5211 - 0.38 10.8 21.1 0.25 11.4 19.1 1.8 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF5401 PF17380.2 ORF5211 - 0.59 8.1 18.6 0.74 7.8 18.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF4407 PF14362.6 ORF5211 - 0.77 9.1 6.6 0.86 8.9 6.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Jnk-SapK_ap_N PF09744.9 ORF5211 - 1.2 9.3 21.8 2.4 8.3 5.7 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 bZIP_1 PF00170.21 ORF5211 - 1.4 9.0 21.7 0.37 10.9 0.9 3.4 1 1 2 3 3 3 0 bZIP transcription factor GvpK PF05121.12 ORF5211 - 1.7 8.7 5.2 2.1 8.5 0.6 2.4 1 1 0 2 2 2 0 Gas vesicle protein K Phage_Mu_Gam PF07352.12 ORF5211 - 2.7 7.9 20.7 0.17 11.8 4.0 3.4 1 1 2 3 3 3 0 Bacteriophage Mu Gam like protein Uso1_p115_C PF04871.13 ORF5211 - 5.6 7.4 23.4 34 4.8 23.3 2.3 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region YlqD PF11068.8 ORF5211 - 5.6 7.3 18.0 5.3 7.4 10.6 2.5 1 1 2 3 3 3 0 YlqD protein DUF1664 PF07889.12 ORF5211 - 7.5 6.6 14.7 10 6.2 2.9 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Trypan_PARP PF05887.11 ORF50245 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF50245 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter RRM_1 PF00076.22 ORF50039 - 6.2e-06 25.9 0.0 1.3e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF4407 PF14362.6 ORF50039 - 0.019 14.3 15.5 0.025 13.9 15.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) RR_TM4-6 PF06459.12 ORF50039 - 1.6 8.5 12.4 2.1 8.1 12.4 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 ATP11 PF06644.11 ORF50039 - 4.9 6.9 9.9 7.4 6.3 9.9 1.3 1 0 0 1 1 1 0 ATP11 protein Dsh_C PF12316.8 ORF50039 - 7.7 6.9 10.4 11 6.4 10.4 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Sugar_tr PF00083.24 ORF48893 - 2.7e-26 92.4 4.0 3e-26 92.3 4.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF48893 - 9.7e-11 41.2 2.6 1.2e-10 40.9 2.6 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily ER_lumen_recept PF00810.18 ORF48893 - 0.071 13.9 8.1 0.14 12.9 2.1 2.1 2 0 0 2 2 2 0 ER lumen protein retaining receptor DUF2207 PF09972.9 ORF48893 - 0.27 9.9 4.5 1.9 7.2 0.0 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) cNMP_binding PF00027.29 ORF47533 - 3.4e-24 84.7 0.0 5.4e-24 84.1 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HTH_Crp_2 PF13545.6 ORF47533 - 4.1e-14 52.3 0.1 2.2e-13 50.0 0.0 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Crp PF00325.20 ORF47533 - 5e-09 35.7 0.1 9.2e-09 34.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family MarR_2 PF12802.7 ORF47533 - 0.00021 21.1 0.1 0.0012 18.7 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_23 PF13384.6 ORF47533 - 0.00048 19.8 0.0 0.0014 18.4 0.0 1.9 2 0 0 2 2 2 1 Homeodomain-like domain RepL PF05732.11 ORF47533 - 0.0012 18.3 0.1 0.16 11.4 0.1 2.3 2 0 0 2 2 2 1 Firmicute plasmid replication protein (RepL) HTH_36 PF13730.6 ORF47533 - 0.0014 18.6 0.0 0.0068 16.3 0.0 2.1 3 0 0 3 3 3 1 Helix-turn-helix domain MarR PF01047.22 ORF47533 - 0.0079 16.1 0.1 0.029 14.3 0.1 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 ORF47533 - 0.0087 15.6 0.2 0.023 14.2 0.2 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 ORF47533 - 0.019 14.5 0.7 0.057 12.9 0.2 2.0 3 0 0 3 3 3 0 Sigma-70, region 4 HTH_7 PF02796.15 ORF47533 - 0.062 13.4 0.1 0.23 11.5 0.1 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Rrf2 PF02082.20 ORF47533 - 0.074 13.4 0.1 0.85 10.0 0.0 2.3 2 0 0 2 2 2 0 Transcriptional regulator HTH_11 PF08279.12 ORF47533 - 0.1 12.5 0.3 0.24 11.4 0.1 1.8 2 0 0 2 2 2 0 HTH domain HTH_38 PF13936.6 ORF47533 - 0.12 12.1 0.2 0.47 10.2 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain DUF4868 PF16162.5 ORF47533 - 0.13 12.2 0.0 0.31 10.9 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4868) HhH-GPD PF00730.25 ORF47533 - 0.14 12.7 0.0 0.22 12.0 0.0 1.4 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein RPA_C PF08784.11 ORF47533 - 0.16 12.6 0.1 0.33 11.6 0.1 1.5 1 0 0 1 1 1 0 Replication protein A C terminal RRM_1 PF00076.22 ORF4615 - 1.8e-11 43.7 0.0 3.8e-11 42.7 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) p450 PF00067.22 ORF45943 - 2.8e-43 148.4 0.1 3.3e-43 148.1 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF4317 PF14199.6 ORF45943 - 0.0016 17.7 0.1 0.0023 17.1 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4317) ECH_1 PF00378.20 ORF45154 - 3.2e-05 23.4 0.1 4.6e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Ras PF00071.22 ORF43942 - 2.5e-48 163.7 0.1 2.5e-48 163.7 0.1 1.4 2 0 0 2 2 2 1 Ras family Roc PF08477.13 ORF43942 - 2.2e-29 102.1 0.3 9.9e-29 100.0 0.0 1.9 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF43942 - 5.2e-11 42.3 0.1 6.6e-11 42.0 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF43942 - 3.9e-05 23.3 0.5 0.00011 21.8 0.1 1.7 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF43942 - 0.0006 19.9 0.1 0.0013 18.8 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 ORF43942 - 0.0038 17.5 0.4 0.011 16.0 0.0 1.9 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 ORF43942 - 0.03 14.2 0.2 7 6.5 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase AAA_7 PF12775.7 ORF43942 - 0.045 13.3 0.0 0.078 12.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region PduV-EutP PF10662.9 ORF43942 - 0.065 13.0 0.4 0.4 10.4 0.0 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.6 ORF43942 - 0.083 13.3 0.0 0.11 12.8 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 ORF43942 - 0.089 12.4 0.2 8.4 5.9 0.0 2.3 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 ORF43942 - 0.12 11.7 1.2 4.1 6.7 0.1 2.2 2 0 0 2 2 2 0 KaiC ABC_tran PF00005.27 ORF43942 - 1.8 9.1 3.8 18 5.8 3.8 2.2 1 1 0 1 1 1 0 ABC transporter PARP PF00644.20 ORF4319 - 1.4e-08 34.6 0.1 2.2e-08 33.9 0.1 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain NIF PF03031.18 ORF42746 - 6.7e-43 146.2 0.1 8.4e-43 145.8 0.1 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase PA PF02225.22 ORF36785 - 1.4e-08 34.6 0.0 2e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 PA domain DnaJ PF00226.31 ORF36495 - 0.00082 19.5 0.0 0.0013 18.8 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain Pep1_7 PF17232.2 ORF36495 - 0.38 11.3 1.4 25 5.4 0.2 2.3 2 0 0 2 2 2 0 Elicitor peptide 1-7 NIF PF03031.18 ORF3629 - 6.7e-43 146.2 0.1 8.4e-43 145.8 0.1 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase CSD PF00313.22 ORF35751 - 5.1e-13 48.7 0.3 4.2e-07 29.7 0.1 2.3 2 0 0 2 2 2 2 'Cold-shock' DNA-binding domain S1-like PF14444.6 ORF35751 - 0.0023 17.8 0.5 0.28 11.2 0.1 2.4 2 0 0 2 2 2 2 S1-like Cu_bind_like PF02298.17 ORF35751 - 0.051 13.6 0.0 0.13 12.3 0.0 1.6 2 0 0 2 2 2 0 Plastocyanin-like domain OB_RNB PF08206.11 ORF35751 - 0.11 12.2 3.5 0.44 10.3 0.7 2.4 2 1 0 2 2 2 0 Ribonuclease B OB domain Methyltransf_3 PF01596.17 ORF34936 - 2.8e-61 206.4 0.1 3.3e-61 206.2 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF34936 - 3e-11 44.3 0.0 4.3e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF34936 - 1.1e-06 28.5 0.0 2.9e-06 27.2 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 ORF34936 - 0.00051 19.9 0.0 0.00076 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 ORF34936 - 0.0029 18.3 0.0 0.0062 17.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF34936 - 0.01 15.2 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF34936 - 0.027 13.8 0.0 0.034 13.4 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase O-FucT PF10250.9 ORF31212 - 2.4e-12 47.2 0.0 2.7e-12 47.1 0.0 1.1 1 0 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase NOP5NT PF08156.13 ORF2855 - 0.12 12.8 0.2 0.29 11.5 0.2 1.6 1 0 0 1 1 1 0 NOP5NT (NUC127) domain zf-primase PF09329.11 ORF2855 - 0.17 11.7 0.3 0.29 11.0 0.3 1.3 1 0 0 1 1 1 0 Primase zinc finger DUF1319 PF07028.11 ORF28468 - 0.023 14.9 1.3 14 6.0 0.4 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1319) Ribosomal_S8e PF01201.22 ORF28468 - 0.036 14.3 0.0 1.4 9.1 0.0 2.8 1 1 0 1 1 1 0 Ribosomal protein S8e DUF2322 PF10084.9 ORF28468 - 0.063 13.3 0.2 87 3.2 0.0 3.4 4 0 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2322) SEO_N PF14576.6 ORF28468 - 0.1 11.7 0.0 0.88 8.7 0.0 1.9 2 0 0 2 2 2 0 Sieve element occlusion N-terminus DSPc PF00782.20 ORF27819 - 1.1e-34 119.1 0.1 1.1e-34 119.1 0.1 1.6 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF27819 - 1.8e-05 24.5 1.1 4.2e-05 23.2 0.0 1.9 2 0 0 2 2 2 1 Protein-tyrosine phosphatase Ribosomal_S2 PF00318.20 ORF27819 - 0.0057 15.9 0.8 0.014 14.7 0.8 1.7 1 1 0 1 1 1 1 Ribosomal protein S2 Aa_trans PF01490.18 ORF25377 - 3.1e-07 29.4 2.2 3.5e-07 29.3 2.2 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein NPR3 PF03666.13 ORF25377 - 0.0095 14.8 3.5 0.012 14.5 3.5 1.1 1 0 0 1 1 1 1 Nitrogen Permease regulator of amino acid transport activity 3 DUF4100 PF13352.6 ORF2441 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) Pro_isomerase PF00160.21 ORF21942 - 1.4e-47 161.9 0.6 1.6e-47 161.7 0.6 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Caleosin PF05042.13 ORF20409 - 0.085 12.8 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Caleosin related protein Avl9 PF09794.9 ORF19886 - 1.2e-14 53.8 1.4 1.2e-14 53.8 1.4 1.7 2 0 0 2 2 2 1 Transport protein Avl9 Afi1 PF07792.12 ORF19886 - 0.00042 20.8 5.1 0.0046 17.4 0.2 2.3 2 0 0 2 2 2 2 Docking domain of Afi1 for Arf3 in vesicle trafficking DUF2347 PF09804.9 ORF19886 - 0.024 14.3 0.2 0.024 14.3 0.2 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2347) uDENN PF03456.18 ORF19886 - 0.055 14.2 1.4 0.26 12.1 0.2 2.3 2 0 0 2 2 2 0 uDENN domain PaO PF08417.12 ORF19886 - 0.064 13.4 0.0 0.14 12.3 0.0 1.6 1 0 0 1 1 1 0 Pheophorbide a oxygenase DUF1048 PF06304.11 ORF19319 - 0.059 13.8 2.4 0.29 11.6 0.0 2.8 2 2 1 3 3 3 0 Protein of unknown function (DUF1048) DUF4013 PF13197.6 ORF16752 - 0.0057 16.5 5.2 0.0057 16.5 5.2 1.9 2 1 0 2 2 2 1 Protein of unknown function (DUF4013) Bac_export_2 PF01312.19 ORF16752 - 5.2 6.2 5.6 9.1 5.4 5.6 1.3 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family DUF4199 PF13858.6 ORF16752 - 6.8 7.1 11.6 2.2 8.6 6.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) DUF4100 PF13352.6 ORF16123 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) SPICE PF15678.5 ORF15544 - 0.0014 18.1 0.6 0.0021 17.5 0.6 1.2 1 0 0 1 1 1 1 Centriole duplication and mitotic chromosome congression Fib_alpha PF08702.10 ORF15544 - 0.0046 17.1 1.5 0.095 12.9 0.0 2.2 1 1 1 2 2 2 1 Fibrinogen alpha/beta chain family Transferrin PF00405.17 ORF15544 - 0.0073 15.5 0.1 0.011 14.9 0.1 1.2 1 0 0 1 1 1 1 Transferrin Seryl_tRNA_N PF02403.22 ORF15544 - 0.039 14.2 5.7 0.12 12.6 3.7 2.1 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain FAM76 PF16046.5 ORF15544 - 0.045 13.1 3.3 0.052 12.9 3.3 1.2 1 0 0 1 1 1 0 FAM76 protein She9_MDM33 PF05546.11 ORF15544 - 0.051 13.4 0.3 0.07 12.9 0.3 1.3 1 0 0 1 1 1 0 She9 / Mdm33 family PHM7_cyt PF14703.6 ORF15544 - 0.059 13.6 1.6 0.1 12.8 1.6 1.4 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Tropomyosin_1 PF12718.7 ORF15544 - 0.078 13.1 5.8 0.056 13.6 3.5 1.9 2 0 0 2 2 2 0 Tropomyosin like MFS_MOT1 PF16983.5 ORF15049 - 0.74 10.2 5.5 0.19 12.1 0.8 2.2 2 1 0 2 2 2 0 Molybdate transporter of MFS superfamily PH PF00169.29 ORF12379 - 0.0001 22.8 0.0 0.00021 21.8 0.0 1.5 1 1 0 1 1 1 1 PH domain Sec7 PF01369.20 ORF12379 - 0.00013 21.8 0.0 0.00017 21.3 0.0 1.2 1 0 0 1 1 1 1 Sec7 domain XRCC4 PF06632.12 ORF112475 - 1.6 7.5 6.5 2.1 7.1 6.5 1.1 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 p450 PF00067.22 ORF111857 - 1.2e-42 146.3 0.1 1.3e-42 146.1 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 Trypan_PARP PF05887.11 ORF110553 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF110553 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Trypan_PARP PF05887.11 ORF1087 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF1087 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF5588 PF17826.1 ORF107789 - 0.47 9.3 1.7 0.65 8.8 1.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5588) MAP65_ASE1 PF03999.12 ORF107789 - 2.5 6.7 5.8 3.2 6.3 5.8 1.1 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) C2 PF00168.30 ORF107553 - 2.2e-05 24.7 0.0 0.0012 19.1 0.0 2.3 2 0 0 2 2 2 2 C2 domain zf-C2H2 PF00096.26 ORF106618 - 6.7e-11 42.0 25.5 5.7e-05 23.3 2.5 3.6 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF106618 - 5.1e-09 36.1 25.5 2.6e-06 27.6 0.8 4.4 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF106618 - 2.7e-06 27.7 29.5 0.00052 20.6 3.1 3.9 4 0 0 4 4 4 3 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF106618 - 0.00012 22.3 9.4 0.025 14.9 0.1 3.5 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 ORF106618 - 0.00089 19.2 0.4 0.00089 19.2 0.4 4.3 4 0 0 4 4 4 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF106618 - 0.022 15.4 7.2 0.042 14.5 2.1 2.5 2 0 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf_UBZ PF18439.1 ORF106618 - 0.028 14.0 4.7 2.5 7.8 0.2 3.0 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-met PF12874.7 ORF106618 - 0.076 13.4 15.1 0.27 11.7 0.1 3.9 3 1 0 3 3 3 0 Zinc-finger of C2H2 type zinc_ribbon_4 PF13717.6 ORF106618 - 0.24 11.4 0.1 0.24 11.4 0.1 3.1 4 0 0 4 4 3 0 zinc-ribbon domain CpXC PF14353.6 ORF106618 - 0.28 11.2 4.8 4.4 7.4 0.9 2.5 1 1 0 2 2 2 0 CpXC protein zf-H2C2_5 PF13909.6 ORF106618 - 0.39 10.5 0.1 0.39 10.5 0.1 4.4 4 0 0 4 4 4 0 C2H2-type zinc-finger domain Zn_Tnp_IS1595 PF12760.7 ORF106618 - 3.2 7.8 13.4 0.09 12.8 4.2 2.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Fer4_8 PF13183.6 ORF106618 - 3.7 8.1 7.8 0.7 10.4 0.5 2.6 3 0 0 3 3 3 0 4Fe-4S dicluster domain PRD PF00874.20 ORF106479 - 6.2e-12 45.7 0.0 9.6e-12 45.0 0.0 1.3 1 0 0 1 1 1 1 PRD domain TetR_C_6 PF13977.6 ORF106479 - 0.069 13.4 0.5 0.67 10.2 0.0 2.4 2 0 0 2 2 2 0 BetI-type transcriptional repressor, C-terminal L27_1 PF09058.10 ORF106479 - 0.078 13.0 1.9 0.14 12.2 0.2 2.3 2 0 0 2 2 2 0 L27_1 Dor1 PF04124.12 ORF106240 - 0.055 12.1 0.1 0.077 11.7 0.1 1.1 1 0 0 1 1 1 0 Dor1-like family DUF1947 PF09183.10 ORF106240 - 0.064 13.6 0.8 0.13 12.6 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) Yae1_N PF09811.9 ORF106240 - 0.082 12.6 10.9 0.22 11.3 10.8 1.7 1 1 0 1 1 1 0 Essential protein Yae1, N terminal YabA PF06156.13 ORF106240 - 0.13 12.9 1.2 0.21 12.2 0.6 1.8 1 1 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF106240 - 1.2 6.9 3.8 1.3 6.8 3.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cytochrom_B562 PF07361.11 ORF106240 - 6.5 7.5 10.4 0.39 11.4 0.4 2.6 2 1 0 2 2 2 0 Cytochrome b562 PriC PF07445.12 ORF105836 - 0.0038 17.2 1.4 0.005 16.8 1.4 1.2 1 0 0 1 1 1 1 Primosomal replication protein priC Orf78 PF06024.12 ORF104711 - 0.83 10.0 3.8 3.3 8.1 3.8 2.0 1 1 0 1 1 1 0 Orf78 (ac78) CDC45 PF02724.14 ORF104711 - 1.1 7.5 4.8 1.4 7.2 4.8 1.1 1 0 0 1 1 1 0 CDC45-like protein p450 PF00067.22 ORF104179 - 1.3e-43 149.5 0.1 1.6e-43 149.1 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF4317 PF14199.6 ORF104179 - 0.0015 17.7 0.1 0.0023 17.1 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4317) RSN1_7TM PF02714.15 ORF103831 - 2.5e-11 43.4 4.1 2.5e-11 43.4 4.1 1.7 2 0 0 2 2 2 1 Calcium-dependent channel, 7TM region, putative phosphate zf-C3HC4_2 PF13923.6 ORF103831 - 0.19 11.6 0.1 0.5 10.2 0.0 1.7 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Trypan_PARP PF05887.11 ORF102940 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF102940 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter p450 PF00067.22 ORF10229 - 6.3e-06 25.2 0.1 7e-06 25.0 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Adeno_knob PF00541.17 ORF101965 - 0.021 14.5 0.0 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 Adenoviral fibre protein (knob domain) DUF4013 PF13197.6 ORF101339 - 0.0057 16.5 5.2 0.0057 16.5 5.2 1.9 2 1 0 2 2 2 1 Protein of unknown function (DUF4013) Bac_export_2 PF01312.19 ORF101339 - 5.2 6.2 5.6 9.1 5.4 5.6 1.3 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family DUF4199 PF13858.6 ORF101339 - 6.8 7.1 11.6 2.2 8.6 6.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) HisKA_3 PF07730.13 NODE_34617_length_625_cov_3.405085_g27671_i0reverse_frame_1 - 1.7e-19 70.1 0.9 1.7e-19 70.1 0.9 1.8 2 0 0 2 2 2 1 Histidine kinase NES_C_h PF18208.1 NODE_34617_length_625_cov_3.405085_g27671_i0reverse_frame_1 - 0.026 14.8 0.3 0.035 14.4 0.3 1.2 1 0 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain AAA_32 PF13654.6 NODE_34617_length_625_cov_3.405085_g27671_i0reverse_frame_1 - 0.068 12.0 0.2 0.092 11.5 0.2 1.2 1 0 0 1 1 1 0 AAA domain DUF5388 PF17363.2 NODE_34617_length_625_cov_3.405085_g27671_i0reverse_frame_1 - 0.15 12.3 0.9 0.35 11.1 0.4 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5388) Spectrin PF00435.21 NODE_34617_length_625_cov_3.405085_g27671_i0reverse_frame_1 - 0.38 11.3 6.0 1.3 9.5 6.0 1.9 1 1 0 1 1 1 0 Spectrin repeat POLO_box PF00659.18 NODE_34614_length_625_cov_57.735593_g27668_i0reverse_frame_1 - 1.9e-09 37.5 0.3 3.8e-09 36.6 0.1 1.6 2 0 0 2 2 2 1 POLO box duplicated region Ndufs5 PF10200.9 NODE_34614_length_625_cov_57.735593_g27668_i0reverse_frame_1 - 0.03 14.6 0.3 0.07 13.4 0.3 1.6 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa DUF4431 PF14485.6 NODE_34614_length_625_cov_57.735593_g27668_i0forward_frame_1 - 0.17 11.7 0.2 0.68 9.8 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) Phe_ZIP PF08916.11 NODE_34594_length_625_cov_169.332203_g27392_i1reverse_frame_1 - 0.054 14.2 10.1 4.3 8.1 1.5 3.5 2 1 1 3 3 3 0 Phenylalanine zipper RCC1_2 PF13540.6 NODE_34594_length_625_cov_169.332203_g27392_i1forward_frame_1 - 9.2e-06 25.3 14.1 0.37 10.6 0.1 4.6 4 1 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_34594_length_625_cov_169.332203_g27392_i1forward_frame_1 - 0.0041 17.2 0.8 19 5.3 0.0 3.8 2 2 1 3 3 3 2 Uncharacterised ACR, YagE family COG1723 DUF1120 PF06551.12 NODE_34594_length_625_cov_169.332203_g27392_i1forward_frame_1 - 0.026 14.7 3.8 6.9 6.9 0.0 3.6 1 1 2 4 4 4 0 Protein of unknown function (DUF1120) CnrY PF17524.2 NODE_34594_length_625_cov_169.332203_g27392_i1forward_frame_1 - 4.5 7.5 6.5 6.3 7.1 1.5 3.0 2 1 1 3 3 3 0 Anti-sigma factor CnrY DUF4506 PF14958.6 NODE_34582_length_625_cov_448.359322_g23750_i1forward_frame_1 - 0.0052 16.3 0.8 0.014 14.9 0.6 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4506) Ole-e-6 PF09253.10 NODE_34581_length_625_cov_462.535593_g27639_i0reverse_frame_1 - 0.33 10.9 8.2 1.5 8.8 8.2 2.1 1 1 0 1 1 1 0 Pollen allergen ole e 6 C_tripleX PF02363.19 NODE_34581_length_625_cov_462.535593_g27639_i0reverse_frame_1 - 5.5 7.5 9.1 3.3 8.2 1.8 2.3 2 0 0 2 2 2 0 Cysteine rich repeat Hepar_II_III PF07940.13 NODE_34548_length_626_cov_100.417936_g27611_i0forward_frame_1 - 0.081 12.5 0.0 0.093 12.3 0.0 1.1 1 0 0 1 1 1 0 Heparinase II/III-like protein SRP14 PF02290.15 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_1 - 3.9e-05 23.9 0.5 3.9e-05 23.9 0.5 2.3 1 1 1 2 2 2 1 Signal recognition particle 14kD protein FG-GAP PF01839.23 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_1 - 0.062 13.4 0.0 0.092 12.9 0.0 1.3 1 0 0 1 1 1 0 FG-GAP repeat ArAE_2_N PF10337.9 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_1 - 1.9 7.4 3.6 3.1 6.7 3.6 1.2 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal O-antigen_lig PF13425.6 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_1 - 4.9 5.8 6.7 5.8 5.6 6.7 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein SPC22 PF04573.12 NODE_34479_length_627_cov_1031.263514_g27546_i0reverse_frame_1 - 2e-37 128.3 1.7 2.6e-37 127.9 1.7 1.2 1 0 0 1 1 1 1 Signal peptidase subunit DUF3487 PF11990.8 NODE_34472_length_628_cov_2.537943_g27539_i0forward_frame_2 - 0.11 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) Peptidase_S39 PF02122.15 NODE_34468_length_628_cov_3.408094_g27535_i0forward_frame_3 - 0.15 11.5 0.2 0.2 11.2 0.2 1.2 1 0 0 1 1 1 0 Peptidase S39 FXMRP1_C_core PF12235.8 NODE_34468_length_628_cov_3.408094_g27535_i0forward_frame_2 - 5.2e-05 23.9 3.0 8.5e-05 23.2 3.0 1.3 1 0 0 1 1 1 1 Fragile X-related 1 protein core C terminal Mis14 PF08641.12 NODE_34468_length_628_cov_3.408094_g27535_i0forward_frame_2 - 0.072 13.4 4.8 0.14 12.5 4.6 1.6 1 1 0 1 1 1 0 Kinetochore protein Mis14 like TcpS PF17456.2 NODE_34468_length_628_cov_3.408094_g27535_i0forward_frame_2 - 0.15 12.1 9.4 0.28 11.2 9.3 1.6 1 1 0 1 1 1 0 Toxin-coregulated pilus protein S DNTTIP1_dimer PF18192.1 NODE_34468_length_628_cov_3.408094_g27535_i0forward_frame_2 - 2.5 8.5 7.7 1.1e+02 3.2 7.7 2.5 1 1 0 1 1 1 0 DNTTIP1 dimerisation domain MgsA_C PF12002.8 NODE_34468_length_628_cov_3.408094_g27535_i0forward_frame_2 - 3.2 7.6 6.9 2.8 7.9 5.3 1.7 1 1 0 1 1 1 0 MgsA AAA+ ATPase C terminal RRM_1 PF00076.22 NODE_34465_length_628_cov_31.767285_g27532_i0reverse_frame_2 - 3.7e-21 74.7 0.3 3.4e-17 62.0 0.1 2.6 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_34465_length_628_cov_31.767285_g27532_i0reverse_frame_2 - 0.00043 20.3 0.1 0.36 11.0 0.0 2.6 1 1 1 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 NODE_34465_length_628_cov_31.767285_g27532_i0reverse_frame_2 - 0.0022 17.9 0.0 0.0097 15.9 0.0 1.9 2 0 0 2 2 2 1 Nup53/35/40-type RNA recognition motif LD_cluster3 PF18180.1 NODE_34465_length_628_cov_31.767285_g27532_i0reverse_frame_2 - 0.11 12.1 1.0 0.19 11.4 0.0 1.8 2 0 0 2 2 2 0 SLOG cluster3 family RCC1_2 PF13540.6 NODE_34461_length_628_cov_69.150084_g27528_i0reverse_frame_2 - 2.1e-11 43.3 10.0 0.021 14.6 0.7 4.5 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Methyltransf_15 PF09445.10 NODE_34461_length_628_cov_69.150084_g27528_i0reverse_frame_2 - 0.025 14.2 1.8 23 4.5 0.0 3.7 4 0 0 4 4 4 0 RNA cap guanine-N2 methyltransferase DpnD-PcfM PF14207.6 NODE_34461_length_628_cov_69.150084_g27528_i0reverse_frame_2 - 0.04 13.8 2.4 73 3.4 0.1 4.5 5 0 0 5 5 5 0 DpnD/PcfM-like protein DUF5540 PF17694.1 NODE_34461_length_628_cov_69.150084_g27528_i0reverse_frame_2 - 0.056 14.0 0.3 6.5 7.4 0.0 3.1 3 1 0 4 4 4 0 Family of unknown function (DUF5540) Nitr_red_bet_C PF14711.6 NODE_34461_length_628_cov_69.150084_g27528_i0reverse_frame_2 - 0.17 11.6 0.1 49 3.7 0.0 3.1 3 0 0 3 3 3 0 Respiratory nitrate reductase beta C-terminal DUF1737 PF08410.10 NODE_34461_length_628_cov_69.150084_g27528_i0reverse_frame_2 - 0.27 11.1 1.2 4 7.4 0.0 3.0 4 0 0 4 4 4 0 Domain of unknown function (DUF1737) RNase_3_N PF18497.1 NODE_34460_length_628_cov_76.222597_g27527_i0forward_frame_3 - 0.026 14.8 0.2 0.048 13.9 0.2 1.4 1 0 0 1 1 1 0 Ribonuclease III N-terminal domain Elongin_A PF06881.11 NODE_34459_length_628_cov_78.097808_g27526_i0forward_frame_3 - 1.5 9.3 8.3 2.2 8.8 7.6 1.5 2 0 0 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A NLRC4_HD2 PF17776.1 NODE_34459_length_628_cov_78.097808_g27526_i0forward_frame_2 - 0.052 14.1 0.1 0.052 14.1 0.1 1.6 2 0 0 2 2 2 0 NLRC4 helical domain HD2 Trimer_CC PF08954.11 NODE_34459_length_628_cov_78.097808_g27526_i0forward_frame_2 - 0.074 12.6 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 Trimerisation motif DMT_YdcZ PF04657.13 NODE_34442_length_628_cov_168.527825_g27510_i0reverse_frame_2 - 1.5e-08 35.1 0.6 2e-08 34.6 0.6 1.1 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ DUF3794 PF12673.7 NODE_34429_length_628_cov_1106.116358_g27498_i0reverse_frame_2 - 0.077 13.3 0.1 0.19 12.0 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3794) DUF2927 PF11150.8 NODE_34422_length_629_cov_2.925926_g27494_i0reverse_frame_3 - 0.035 14.2 0.5 0.042 13.9 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2927) DNase_NucA_NucB PF14040.6 NODE_34422_length_629_cov_2.925926_g27494_i0forward_frame_3 - 3.7 7.9 6.5 1.1 9.6 1.6 2.2 2 0 0 2 2 2 0 Deoxyribonuclease NucA/NucB NUC130_3NT PF08158.12 NODE_34421_length_629_cov_3.183502_g27493_i0forward_frame_3 - 0.049 13.9 2.3 0.11 12.9 2.3 1.5 1 0 0 1 1 1 0 NUC130/3NT domain COX14 PF14880.6 NODE_34413_length_629_cov_72.651515_g27486_i0reverse_frame_3 - 0.058 13.2 7.1 5.6 6.9 0.8 3.3 3 0 0 3 3 3 0 Cytochrome oxidase c assembly Integrase_Zn PF02022.19 NODE_34413_length_629_cov_72.651515_g27486_i0reverse_frame_3 - 4.1 7.4 8.9 68 3.5 0.2 4.0 4 0 0 4 4 4 0 Integrase Zinc binding domain Ribosomal_S14 PF00253.21 NODE_34413_length_629_cov_72.651515_g27486_i0forward_frame_2 - 3.4 7.5 8.1 2 8.2 1.4 2.7 3 0 0 3 3 3 0 Ribosomal protein S14p/S29e Ribosomal_60s PF00428.19 NODE_34408_length_629_cov_79.292929_g27481_i0reverse_frame_2 - 0.089 13.4 15.2 0.13 12.9 14.0 1.8 2 0 0 2 2 2 0 60s Acidic ribosomal protein Stm1_N PF09598.10 NODE_34408_length_629_cov_79.292929_g27481_i0reverse_frame_2 - 3.3 8.6 12.2 13 6.7 9.4 2.4 2 0 0 2 2 2 0 Stm1 Hormone_1 PF00103.20 NODE_34397_length_629_cov_164.260943_g27217_i1reverse_frame_3 - 0.0035 17.1 3.2 0.0062 16.3 3.2 1.5 1 0 0 1 1 1 1 Somatotropin hormone family Sec3-PIP2_bind PF15277.6 NODE_34396_length_629_cov_166.353535_g27471_i0forward_frame_3 - 0.085 13.0 0.0 0.22 11.7 0.0 1.7 2 0 0 2 2 2 0 Exocyst complex component SEC3 N-terminal PIP2 binding PH V-SNARE PF05008.15 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 1.2e-11 44.9 0.9 3.2e-11 43.4 0.9 1.8 1 0 0 1 1 1 1 Vesicle transport v-SNARE protein N-terminus Remorin_C PF03763.13 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.0067 16.3 1.3 0.014 15.3 1.3 1.5 1 0 0 1 1 1 1 Remorin, C-terminal region DUF2730 PF10805.8 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.037 14.1 0.7 0.12 12.5 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) DUF5618 PF18498.1 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.058 13.6 0.6 0.058 13.6 0.6 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF5618) Uds1 PF15456.6 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.065 13.4 8.5 0.78 9.9 2.8 2.3 1 1 1 2 2 2 0 Up-regulated During Septation Tup_N PF08581.10 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.13 12.6 6.4 0.061 13.6 1.7 2.8 1 1 2 3 3 3 0 Tup N-terminal Exonuc_VII_L PF02601.15 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.13 11.8 4.3 0.16 11.5 4.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit ALMT PF11744.8 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.17 10.7 9.6 0.2 10.4 9.6 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Lebercilin PF15619.6 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.21 11.2 8.6 0.053 13.2 3.0 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF489 PF04356.12 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.25 11.4 4.0 5.5 7.0 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF489) DUF2408 PF10303.9 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.41 11.2 5.8 0.6 10.7 5.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) BORCS7 PF16088.5 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.45 10.8 6.8 0.26 11.6 2.4 2.4 1 1 1 2 2 2 0 BLOC-1-related complex sub-unit 7 Tweety PF04906.13 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.81 8.3 3.4 8.7 4.9 0.2 2.6 1 1 2 3 3 3 0 Tweety TMPIT PF07851.13 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 4.7 6.4 8.6 16 4.6 8.6 1.8 1 1 1 2 2 2 0 TMPIT-like protein Uso1_p115_C PF04871.13 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 7.4 7.0 8.9 4.1 7.8 3.0 2.3 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region EGF_alliinase PF04863.13 NODE_34380_length_629_cov_3826.441077_g27458_i0reverse_frame_2 - 0.051 14.0 0.2 0.082 13.3 0.2 1.2 1 0 0 1 1 1 0 Alliinase EGF-like domain EIID-AGA PF03613.14 NODE_34374_length_630_cov_2.026891_g27454_i0reverse_frame_3 - 0.031 13.4 3.8 0.015 14.5 1.7 1.5 2 0 0 2 2 2 0 PTS system mannose/fructose/sorbose family IID component Benyvirus_P25 PF05744.11 NODE_34374_length_630_cov_2.026891_g27454_i0reverse_frame_3 - 0.037 13.3 0.2 0.05 12.9 0.2 1.1 1 0 0 1 1 1 0 Benyvirus P25/P26 protein MFS_1 PF07690.16 NODE_34371_length_630_cov_3.715966_g27451_i0reverse_frame_3 - 1.7e-10 40.4 24.7 2e-10 40.1 24.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Alpha-amylase PF00128.24 NODE_34359_length_630_cov_94.831933_g27440_i0reverse_frame_2 - 9.8e-22 77.9 0.0 1.3e-21 77.6 0.0 1.0 1 0 0 1 1 1 1 Alpha amylase, catalytic domain DUF4312 PF14189.6 NODE_34335_length_630_cov_491.361345_g18755_i2reverse_frame_3 - 7.5 6.6 6.9 14 5.8 6.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) 40S_S4_C PF16121.5 NODE_34335_length_630_cov_491.361345_g18755_i2forward_frame_3 - 0.081 12.6 0.1 0.18 11.4 0.1 1.6 1 0 0 1 1 1 0 40S ribosomal protein S4 C-terminus UQ_con PF00179.26 NODE_34335_length_630_cov_491.361345_g18755_i2forward_frame_2 - 8.8e-22 77.3 0.1 3.9e-18 65.5 0.1 2.3 1 1 1 2 2 2 2 Ubiquitin-conjugating enzyme Peptidase_C54 PF03416.19 ORF99727 - 2.4e-39 135.5 0.2 2.5e-39 135.3 0.2 1.0 1 0 0 1 1 1 1 Peptidase family C54 TPR_10 PF13374.6 ORF97301 - 3.2e-27 93.6 1.3 1.7e-09 37.3 0.0 3.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF97301 - 1.8e-20 73.0 1.9 9.4e-08 32.2 0.1 3.3 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF97301 - 6.2e-08 32.8 2.1 0.22 12.5 0.0 4.3 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF97301 - 9.9e-08 31.7 0.0 3e-07 30.1 0.0 1.6 1 1 1 2 2 2 1 MalT-like TPR region TPR_16 PF13432.6 ORF97301 - 2.4e-07 31.3 4.5 0.044 14.4 0.1 3.9 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF97301 - 1.8e-05 24.3 0.7 2.5 8.1 0.1 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_4 PF07721.14 ORF97301 - 0.00039 20.8 8.0 0.21 12.3 0.1 4.2 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF97301 - 0.0011 18.9 6.5 2.1 8.6 0.1 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF97301 - 0.014 15.4 0.1 59 4.0 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF97301 - 0.039 13.6 0.7 19 5.0 0.1 3.2 3 0 0 3 3 3 0 TPR repeat TPR_17 PF13431.6 ORF97301 - 0.072 13.5 0.2 22 5.7 0.0 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF97301 - 0.14 12.5 0.2 60 4.2 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF97301 - 0.22 12.1 8.3 0.35 11.4 0.1 3.5 2 2 2 4 4 4 0 Tetratricopeptide repeat Aldose_epim PF01263.20 ORF96034 - 2.1e-39 135.6 0.0 2.4e-39 135.4 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase PAP_central PF04928.17 ORF95933 - 0.0098 14.9 0.0 0.012 14.6 0.0 1.1 1 0 0 1 1 1 1 Poly(A) polymerase central domain LETM1 PF07766.13 ORF95933 - 0.016 14.6 0.3 0.022 14.1 0.3 1.2 1 0 0 1 1 1 0 LETM1-like protein Inj_translocase PF16928.5 ORF95933 - 1.5 8.2 7.9 1.5 8.2 2.8 2.3 1 1 1 2 2 2 0 DNA/protein translocase of phage P22 injectosome VP9 PF09625.10 ORF95761 - 0.0085 16.2 3.2 0.014 15.5 0.3 2.5 2 0 0 2 2 2 1 VP9 protein TMF_TATA_bd PF12325.8 ORF95761 - 0.017 15.3 9.1 0.017 15.3 9.1 2.3 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding Rootletin PF15035.6 ORF95761 - 0.018 15.1 11.7 0.038 14.0 11.7 1.5 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Lebercilin PF15619.6 ORF95761 - 0.025 14.2 5.3 0.025 14.2 5.3 3.1 2 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease Troponin PF00992.20 ORF95761 - 0.028 14.7 18.0 0.13 12.6 8.5 2.2 2 0 0 2 2 2 0 Troponin Uso1_p115_C PF04871.13 ORF95761 - 0.043 14.2 0.2 0.043 14.2 0.2 2.4 2 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region CEP209_CC5 PF16574.5 ORF95761 - 0.094 12.9 21.8 0.023 14.9 12.7 2.6 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 YtxH PF12732.7 ORF95761 - 0.13 12.8 1.2 14 6.3 1.2 2.7 1 1 0 1 1 1 0 YtxH-like protein ERM PF00769.19 ORF95761 - 0.18 11.6 14.1 0.019 14.8 7.5 2.0 1 1 0 1 1 1 0 Ezrin/radixin/moesin family UPF0242 PF06785.11 ORF95761 - 0.24 11.5 16.4 1.5 8.9 8.4 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Cnn_1N PF07989.11 ORF95761 - 0.35 11.0 26.3 1.3 9.2 5.7 2.6 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 Phage_GP20 PF06810.11 ORF95761 - 0.44 10.3 18.7 0.62 9.9 2.7 2.5 2 1 1 3 3 3 0 Phage minor structural protein GP20 AKNA PF12443.8 ORF95761 - 0.72 10.5 7.7 2.1 9.1 0.2 2.8 2 1 1 3 3 3 0 AT-hook-containing transcription factor Tup_N PF08581.10 ORF95761 - 0.75 10.1 15.6 0.98 9.8 5.6 2.6 2 0 0 2 2 2 0 Tup N-terminal Ead_Ea22 PF13935.6 ORF95761 - 0.83 10.3 10.5 4.7 7.9 4.0 2.2 1 1 1 2 2 2 0 Ead/Ea22-like protein DUF1664 PF07889.12 ORF95761 - 1.2 9.2 4.8 8.3 6.5 1.0 2.5 3 0 0 3 3 2 0 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 ORF95761 - 1.2 9.2 19.8 0.058 13.5 2.7 3.2 2 1 0 3 3 3 0 Centrosome localisation domain of PPC89 PRP1_N PF06424.12 ORF95761 - 1.4 9.3 5.5 0.79 10.1 3.4 1.7 1 1 0 1 1 1 0 PRP1 splicing factor, N-terminal Ly49 PF08391.10 ORF95761 - 1.9 8.8 12.0 0.26 11.6 4.4 2.1 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region DUF3450 PF11932.8 ORF95761 - 2 7.6 10.2 0.28 10.4 4.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) TSC22 PF01166.18 ORF95761 - 2.6 8.4 15.4 0.33 11.3 4.5 3.2 2 2 1 3 3 3 0 TSC-22/dip/bun family PhoU PF01895.19 ORF95761 - 3.1 8.3 9.9 2.9 8.4 1.6 2.5 2 1 0 2 2 2 0 PhoU domain bZIP_1 PF00170.21 ORF95761 - 6.7 6.9 25.9 0.41 10.8 2.0 4.3 2 2 2 4 4 4 0 bZIP transcription factor ZapB PF06005.12 ORF95761 - 7 7.2 20.1 0.74 10.3 2.5 3.0 2 1 0 2 2 2 0 Cell division protein ZapB DUF724 PF05266.14 ORF95761 - 8.1 6.2 15.3 2 8.2 6.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF724) EB1 PF03271.17 ORF94703 - 3.9e-16 59.0 1.2 6.6e-16 58.3 1.2 1.4 1 0 0 1 1 1 1 EB1-like C-terminal motif T3SchapCesA PF11439.8 ORF94359 - 4.5e-05 23.5 7.2 0.019 15.1 0.5 2.3 1 1 1 2 2 2 2 Type III secretion system filament chaperone CesA Apolipoprotein PF01442.18 ORF94359 - 0.035 14.0 1.1 0.068 13.0 1.1 1.6 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain ATP-cone PF03477.16 ORF94359 - 0.062 13.9 3.1 0.13 12.8 1.2 2.2 1 1 0 2 2 2 0 ATP cone domain DUF4404 PF14357.6 ORF94359 - 0.064 13.9 2.3 7.6 7.3 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) DUF2408 PF10303.9 ORF94359 - 0.087 13.4 8.1 1.5 9.4 4.8 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) FUSC-like PF12805.7 ORF94359 - 0.19 10.8 0.7 3.1 6.8 0.0 2.1 2 0 0 2 2 2 0 FUSC-like inner membrane protein yccS FtsX_ECD PF18075.1 ORF94359 - 0.21 12.3 2.7 0.37 11.4 0.7 2.2 1 1 1 2 2 2 0 FtsX extracellular domain Homeodomain PF00046.29 ORF94281 - 0.015 15.2 0.1 0.03 14.1 0.1 1.5 1 0 0 1 1 1 0 Homeodomain OrfB_Zn_ribbon PF07282.11 ORF94281 - 0.038 13.9 0.2 0.12 12.3 0.2 1.8 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Pellino PF04710.14 ORF94057 - 0.01 14.5 1.2 0.011 14.4 1.2 1.1 1 0 0 1 1 1 0 Pellino EF-hand_7 PF13499.6 ORF94057 - 0.011 16.2 1.1 0.15 12.5 1.1 2.6 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF94057 - 0.13 12.3 0.7 28 5.0 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain Sigma_reg_C PF13791.6 ORF94057 - 3 8.0 10.5 1.4 9.1 5.0 2.9 2 1 1 3 3 3 0 Sigma factor regulator C-terminal DUF3510 PF12022.8 ORF93102 - 0.044 14.2 6.3 1.4 9.3 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3510) Heme_oxygenase PF01126.20 ORF93102 - 0.077 12.8 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Heme oxygenase BCDHK_Adom3 PF10436.9 ORF93102 - 0.096 12.5 1.7 0.36 10.6 1.7 1.9 1 1 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase DDHD PF02862.17 ORF93102 - 0.15 12.2 3.4 0.22 11.7 3.4 1.3 1 0 0 1 1 1 0 DDHD domain Goodbye PF17109.5 ORF93102 - 0.19 12.2 2.8 8.7 6.8 1.4 2.4 2 0 0 2 2 2 0 fungal STAND N-terminal Goodbye domain DTHCT PF08070.11 ORF93102 - 0.3 11.8 8.7 0.52 11.1 8.7 1.4 1 0 0 1 1 1 0 DTHCT (NUC029) region DUF1995 PF09353.10 ORF88255 - 1.3e-08 35.1 0.0 3.1e-08 33.9 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF1995) Pertactin PF03212.14 ORF88255 - 0.073 13.0 0.2 1.8 8.5 0.1 2.3 1 1 1 2 2 2 0 Pertactin Sugar_tr PF00083.24 ORF86640 - 1.6e-10 40.4 2.4 2.1e-10 40.1 2.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter HR1 PF02185.16 ORF85770 - 0.063 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Hr1 repeat PPR_2 PF13041.6 ORF83261 - 1.6e-28 98.6 0.2 5.9e-14 52.0 0.0 3.7 2 1 1 3 3 3 3 PPR repeat family PPR_1 PF12854.7 ORF83261 - 9.4e-19 66.8 0.0 5e-05 22.9 0.0 4.2 4 0 0 4 4 4 3 PPR repeat PPR PF01535.20 ORF83261 - 6.5e-18 63.7 0.4 0.00011 22.2 0.0 5.4 6 0 0 6 6 6 4 PPR repeat PPR_3 PF13812.6 ORF83261 - 2.4e-17 62.7 0.4 1.1e-12 47.9 0.1 3.3 2 1 1 3 3 3 3 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF83261 - 2.9e-07 30.1 4.5 1.2e-05 24.8 0.2 2.2 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP HrpB1_HrpK PF09613.10 ORF83261 - 0.0067 16.1 0.4 0.018 14.7 0.0 1.9 2 0 0 2 2 2 1 Bacterial type III secretion protein (HrpB1_HrpK) ERAP1_C PF11838.8 ORF83261 - 0.033 13.7 0.4 0.052 13.1 0.4 1.3 1 1 0 1 1 1 0 ERAP1-like C-terminal domain ELYS PF13934.6 ORF83261 - 0.046 13.7 1.2 0.083 12.9 0.1 1.7 1 1 1 2 2 2 0 Nuclear pore complex assembly ExbD PF02472.16 ORF83261 - 0.08 13.1 0.4 0.66 10.2 0.1 2.2 2 0 0 2 2 2 0 Biopolymer transport protein ExbD/TolR P16-Arc PF04699.14 ORF83261 - 0.12 12.8 1.6 0.22 12.0 0.3 1.9 2 0 0 2 2 2 0 ARP2/3 complex 16 kDa subunit (p16-Arc) Rpr2 PF04032.16 ORF82919 - 0.041 14.2 0.1 0.041 14.2 0.1 1.9 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Nudix_N_2 PF14803.6 ORF82919 - 0.19 11.6 0.2 0.19 11.6 0.2 2.6 2 1 1 3 3 3 0 Nudix N-terminal Abhydrolase_6 PF12697.7 ORF82893 - 3e-05 24.7 0.0 3.9e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF82893 - 0.037 14.1 0.0 0.07 13.2 0.0 1.4 1 0 0 1 1 1 0 Thioesterase domain EMC3_TMCO1 PF01956.16 ORF81525 - 0.0089 15.8 0.2 0.013 15.2 0.2 1.3 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like DUF2757 PF10955.8 ORF81525 - 0.13 12.6 3.1 0.22 11.8 2.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2757) V_ATPase_I PF01496.19 ORF81525 - 0.15 9.9 0.4 0.22 9.4 0.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Vpu PF00558.19 ORF81525 - 2.4 8.0 6.3 1.8 8.4 4.8 1.6 1 1 0 1 1 1 0 Vpu protein HATPase_c PF02518.26 ORF80964 - 5.4e-18 65.5 0.1 7.7e-18 65.0 0.1 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF80964 - 0.01 15.7 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FAD_binding_2 PF00890.24 ORF80964 - 0.058 12.5 0.0 0.079 12.0 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain Orthoreo_P17 PF07272.11 ORF80329 - 0.025 14.6 1.4 0.25 11.3 0.2 2.3 2 0 0 2 2 2 0 Orthoreovirus P17 protein DUF2673 PF10880.8 ORF80329 - 1.1 9.5 5.1 18 5.6 0.7 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2673) Microcephalin PF12258.8 ORF80329 - 2.3 7.3 9.4 7.7 5.6 0.5 2.2 1 1 0 2 2 2 0 Microcephalin protein Sec2p PF06428.11 ORF77235 - 0.049 13.6 0.6 0.049 13.6 0.6 3.1 2 1 0 2 2 2 0 GDP/GTP exchange factor Sec2p MitMem_reg PF13012.6 ORF77235 - 0.067 13.6 2.4 0.14 12.6 2.1 1.8 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function Spc7 PF08317.11 ORF77235 - 0.12 11.2 21.0 0.034 13.0 14.1 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Sugarporin_N PF11471.8 ORF77235 - 0.24 11.4 3.9 13 5.9 1.1 2.5 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension LsmAD PF06741.13 ORF77235 - 0.94 10.1 7.6 12 6.6 3.0 2.4 2 0 0 2 2 2 0 LsmAD domain HAP1_N PF04849.13 ORF77235 - 1.4 8.1 23.3 2.4 7.3 1.0 2.0 1 1 1 2 2 2 0 HAP1 N-terminal conserved region GP41 PF00517.17 ORF77235 - 2.7 7.9 5.8 3.9 7.3 0.6 2.3 1 1 1 2 2 2 0 Retroviral envelope protein TMF_DNA_bd PF12329.8 ORF77235 - 2.8 8.0 29.8 1.4 8.9 7.2 3.2 1 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding BLOC1_2 PF10046.9 ORF77235 - 2.8 8.3 12.2 1.7 9.0 1.6 2.9 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DivIVA PF05103.13 ORF77235 - 7.6 6.6 15.1 5.5 7.1 0.4 3.1 2 1 0 2 2 2 0 DivIVA protein Csm1_N PF18504.1 ORF77235 - 7.9 6.9 21.0 1.2 9.5 1.8 3.1 2 1 1 3 3 3 0 Csm1 N-terminal domain ADIP PF11559.8 ORF77235 - 8.1 6.5 21.3 0.91 9.6 3.7 3.0 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding Prominin PF05478.11 ORF77235 - 8.5 4.2 9.9 15 3.3 9.8 1.3 1 1 0 1 1 1 0 Prominin PmbA_TldD PF01523.16 ORF7476 - 2.3e-23 83.5 0.0 3.1e-23 83.0 0.0 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase FtsJ PF01728.19 ORF73811 - 9.4e-59 198.5 0.0 1.2e-58 198.2 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_25 PF13649.6 ORF73811 - 0.018 15.7 1.3 0.97 10.2 0.5 3.1 2 1 1 3 3 3 0 Methyltransferase domain Reovirus_L2 PF06016.11 ORF73811 - 0.059 10.6 0.0 0.068 10.4 0.0 1.0 1 0 0 1 1 1 0 Reovirus core-spike protein lambda-2 (L2) Methyltransf_31 PF13847.6 ORF73811 - 0.15 11.9 0.0 12 5.7 0.0 2.3 1 1 1 2 2 2 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 ORF73811 - 0.17 11.5 0.0 0.37 10.4 0.0 1.5 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F DUF3510 PF12022.8 ORF72679 - 0.044 14.2 6.3 1.4 9.3 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3510) Heme_oxygenase PF01126.20 ORF72679 - 0.077 12.8 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Heme oxygenase BCDHK_Adom3 PF10436.9 ORF72679 - 0.096 12.5 1.7 0.36 10.6 1.7 1.9 1 1 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase DDHD PF02862.17 ORF72679 - 0.15 12.2 3.4 0.22 11.7 3.4 1.3 1 0 0 1 1 1 0 DDHD domain Goodbye PF17109.5 ORF72679 - 0.19 12.2 2.8 8.7 6.8 1.4 2.4 2 0 0 2 2 2 0 fungal STAND N-terminal Goodbye domain DTHCT PF08070.11 ORF72679 - 0.3 11.8 8.7 0.52 11.1 8.7 1.4 1 0 0 1 1 1 0 DTHCT (NUC029) region GSK-3_bind PF05350.12 ORF71598 - 0.12 11.7 2.8 0.14 11.5 1.9 1.5 1 1 0 1 1 1 0 Glycogen synthase kinase-3 binding DUF3510 PF12022.8 ORF71145 - 0.044 14.2 6.3 1.4 9.3 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3510) Heme_oxygenase PF01126.20 ORF71145 - 0.077 12.8 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Heme oxygenase BCDHK_Adom3 PF10436.9 ORF71145 - 0.096 12.5 1.7 0.36 10.6 1.7 1.9 1 1 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase DDHD PF02862.17 ORF71145 - 0.15 12.2 3.4 0.22 11.7 3.4 1.3 1 0 0 1 1 1 0 DDHD domain Goodbye PF17109.5 ORF71145 - 0.19 12.2 2.8 8.7 6.8 1.4 2.4 2 0 0 2 2 2 0 fungal STAND N-terminal Goodbye domain DTHCT PF08070.11 ORF71145 - 0.3 11.8 8.7 0.52 11.1 8.7 1.4 1 0 0 1 1 1 0 DTHCT (NUC029) region TIM PF00121.18 ORF70196 - 5.6e-77 258.4 0.7 6.3e-77 258.2 0.7 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase Proteasome PF00227.26 ORF6623 - 1.8e-31 109.1 0.0 2e-31 108.9 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit Plasmod_Pvs28 PF06247.11 ORF65721 - 0.0044 17.3 1.9 0.009 16.3 1.9 1.5 1 0 0 1 1 1 1 Pvs28 EGF domain JmjC PF02373.22 ORF65307 - 0.033 14.6 0.1 0.08 13.4 0.0 1.7 2 0 0 2 2 2 0 JmjC domain, hydroxylase zf-C3HC4_3 PF13920.6 ORF6520 - 0.0037 17.1 0.3 0.0055 16.5 0.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF6520 - 0.019 14.8 0.6 0.032 14.1 0.6 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 DUF1771 PF08590.10 ORF6520 - 0.1 13.0 0.1 0.18 12.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1771) DUF3510 PF12022.8 ORF62890 - 0.044 14.2 6.3 1.4 9.3 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3510) Heme_oxygenase PF01126.20 ORF62890 - 0.077 12.8 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Heme oxygenase BCDHK_Adom3 PF10436.9 ORF62890 - 0.096 12.5 1.7 0.36 10.6 1.7 1.9 1 1 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase DDHD PF02862.17 ORF62890 - 0.15 12.2 3.4 0.22 11.7 3.4 1.3 1 0 0 1 1 1 0 DDHD domain Goodbye PF17109.5 ORF62890 - 0.19 12.2 2.8 8.7 6.8 1.4 2.4 2 0 0 2 2 2 0 fungal STAND N-terminal Goodbye domain DTHCT PF08070.11 ORF62890 - 0.3 11.8 8.7 0.52 11.1 8.7 1.4 1 0 0 1 1 1 0 DTHCT (NUC029) region AF0941-like PF14591.6 ORF60609 - 0.071 13.7 3.7 0.1 13.2 1.8 2.0 1 1 1 2 2 2 0 AF0941-like CDK2AP PF09806.9 ORF59601 - 0.022 14.8 0.0 0.03 14.4 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein Homeodomain PF00046.29 ORF56154 - 0.015 15.2 0.1 0.03 14.1 0.1 1.5 1 0 0 1 1 1 0 Homeodomain OrfB_Zn_ribbon PF07282.11 ORF56154 - 0.038 13.9 0.2 0.12 12.3 0.2 1.8 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Thioredoxin_6 PF13848.6 ORF53484 - 0.0014 18.6 0.9 0.14 12.1 0.0 3.3 3 1 0 3 3 3 1 Thioredoxin-like domain Peptidase_M48 PF01435.18 ORF5164 - 9e-23 81.1 0.0 1.3e-22 80.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 RRS1 PF04939.12 ORF51571 - 5.1e-16 59.0 12.2 1.1e-15 57.9 12.2 1.5 1 0 0 1 1 1 1 Ribosome biogenesis regulatory protein (RRS1) MORN PF02493.20 ORF49023 - 3.2e-11 42.4 17.4 6.3e-05 22.6 0.2 4.5 4 0 0 4 4 4 3 MORN repeat STIMATE PF12400.8 ORF45651 - 5.7e-06 26.9 1.6 8e-06 26.4 1.6 1.2 1 0 0 1 1 1 1 STIMATE family Ank_2 PF12796.7 ORF45112 - 4.1e-32 110.6 0.0 1.8e-09 38.0 0.0 2.8 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF45112 - 3.6e-19 68.9 0.3 6.5e-06 26.6 0.0 4.3 2 1 2 5 5 5 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF45112 - 3e-18 65.6 0.3 1.1e-05 25.6 0.0 4.9 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF45112 - 7.8e-18 64.1 1.2 1.6e-05 25.1 0.0 5.5 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF45112 - 4.5e-14 51.2 0.1 0.00072 19.8 0.0 5.4 5 1 1 6 6 6 3 Ankyrin repeat AAA PF00004.29 ORF45002 - 4.7e-06 27.1 0.0 7.6e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) COPI_C PF06957.11 ORF45002 - 0.5 9.1 8.5 0.64 8.7 8.5 1.1 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus Myc_N PF01056.18 ORF45002 - 0.9 9.4 6.4 3.7 7.3 7.4 1.4 2 0 0 2 2 2 0 Myc amino-terminal region FAM176 PF14851.6 ORF45002 - 1.8 8.2 5.6 2.8 7.6 5.6 1.3 1 0 0 1 1 1 0 FAM176 family TFIIS_M PF07500.14 ORF43983 - 1.6e-18 67.2 2.7 2.1e-18 66.8 2.7 1.2 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain TFIIS_C PF01096.18 ORF43983 - 0.29 11.0 6.2 2 8.3 6.2 2.3 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) ESCRT-II PF05871.12 ORF41421 - 0.36 11.1 4.7 0.59 10.4 3.5 1.8 1 1 1 2 2 2 0 ESCRT-II complex subunit DUF3112 PF11309.8 ORF40845 - 2.6 7.4 5.1 1.1 8.7 2.6 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3112) CCDC24 PF15669.5 ORF40439 - 0.13 12.1 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family Homeodomain PF00046.29 ORF38453 - 0.015 15.2 0.1 0.03 14.1 0.1 1.5 1 0 0 1 1 1 0 Homeodomain OrfB_Zn_ribbon PF07282.11 ORF38453 - 0.038 13.9 0.2 0.12 12.3 0.2 1.8 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Pkinase_Tyr PF07714.17 ORF38020 - 9.4e-35 120.1 0.0 3.3e-28 98.7 0.0 2.0 1 1 1 2 2 2 2 Protein tyrosine kinase Pkinase PF00069.25 ORF38020 - 4e-28 98.5 0.0 5.2e-25 88.3 0.0 2.0 1 1 1 2 2 2 2 Protein kinase domain Pkinase_fungal PF17667.1 ORF38020 - 0.11 11.2 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase DUF4407 PF14362.6 ORF37645 - 0.28 10.5 1.5 0.34 10.2 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4094 PF13334.6 ORF37645 - 1.5 9.3 7.0 0.36 11.3 2.5 2.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4094) DUF3082 PF11282.8 ORF37032 - 5.6e-20 71.4 0.5 9.2e-20 70.7 0.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3082) CobD_Cbib PF03186.13 ORF36690 - 0.11 11.7 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 CobD/Cbib protein KDZ PF18758.1 ORF36690 - 0.13 11.9 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Kyakuja-Dileera-Zisupton transposase NUDIX PF00293.28 ORF35770 - 1e-11 45.0 0.3 1.5e-11 44.4 0.3 1.3 1 0 0 1 1 1 1 NUDIX domain DUF3892 PF13031.6 ORF35770 - 0.12 13.0 0.1 2.7 8.7 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3892) HTH_Tnp_1 PF01527.20 ORF35770 - 0.13 12.6 2.4 0.91 9.9 0.1 2.3 2 0 0 2 2 2 0 Transposase Baculo_11_kDa PF06143.11 ORF34869 - 0.015 14.9 0.7 0.015 14.9 0.7 2.6 2 1 1 3 3 3 0 Baculovirus 11 kDa family ApeA_NTD1 PF18862.1 ORF34869 - 0.04 13.5 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 ApeA N-terminal domain 1 Amnionless PF14828.6 ORF34869 - 2.1 7.1 3.8 1.2 7.9 0.0 2.2 2 1 1 3 3 3 0 Amnionless Synaptobrevin PF00957.21 ORF34515 - 4.3e-16 58.5 2.8 8e-16 57.6 2.8 1.4 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 ORF34515 - 5e-16 58.5 1.0 1e-15 57.5 1.0 1.5 1 0 0 1 1 1 1 Regulated-SNARE-like domain SHE3 PF17078.5 ORF34515 - 0.089 12.5 4.7 0.13 11.9 4.7 1.2 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 MAGI_u1 PF16663.5 ORF34515 - 0.28 11.3 1.1 0.61 10.2 1.1 1.5 1 0 0 1 1 1 0 Unstructured region on MAGI Myb_DNA-binding PF00249.31 ORF3434 - 1.3e-10 41.3 0.6 2.3e-10 40.5 0.6 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Mgr1 PF08602.10 ORF3434 - 0.0055 15.6 0.3 0.0084 15.0 0.0 1.4 2 0 0 2 2 2 1 Mgr1-like, i-AAA protease complex subunit Myb_DNA-bind_7 PF15963.5 ORF3434 - 0.014 15.3 1.4 0.014 15.3 1.4 1.8 1 1 0 1 1 1 0 Myb DNA-binding like CNOT1_TTP_bind PF16417.5 ORF3434 - 0.058 12.6 0.0 0.086 12.0 0.0 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Ntox27 PF15531.6 ORF3434 - 0.12 12.2 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial toxin 27 WD40 PF00400.32 ORF32746 - 1.1e-06 29.2 0.2 0.00018 22.2 0.1 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat Glyco_hydro_38C PF07748.13 ORF32746 - 0.027 14.5 0.3 0.046 13.8 0.3 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal domain DUF5069 PF16798.5 ORF32649 - 0.014 15.6 2.1 0.014 15.6 2.1 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF5069) DUF3584 PF12128.8 ORF32649 - 0.037 11.5 30.1 0.044 11.3 30.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) THEG PF14912.6 ORF32649 - 0.067 13.6 0.5 0.17 12.3 0.5 1.7 1 0 0 1 1 1 0 Testicular haploid expressed repeat BCAS2 PF05700.11 ORF32649 - 0.51 10.0 29.8 2.5 7.8 0.6 3.4 1 1 2 3 3 3 0 Breast carcinoma amplified sequence 2 (BCAS2) TPR_MLP1_2 PF07926.12 ORF32649 - 0.93 9.6 46.6 0.4 10.8 21.8 3.5 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein FAM76 PF16046.5 ORF32649 - 1.3 8.3 21.7 2.2 7.6 21.7 1.4 1 1 0 1 1 1 0 FAM76 protein DUF4407 PF14362.6 ORF32649 - 9.6 5.5 29.3 99 2.1 29.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) ZapB PF06005.12 ORF32649 - 9.7 6.7 49.0 3.6 8.1 4.2 4.9 1 1 4 5 5 5 0 Cell division protein ZapB Synaptobrevin PF00957.21 ORF32600 - 4.3e-16 58.5 2.8 8e-16 57.6 2.8 1.4 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 ORF32600 - 5e-16 58.5 1.0 1e-15 57.5 1.0 1.5 1 0 0 1 1 1 1 Regulated-SNARE-like domain SHE3 PF17078.5 ORF32600 - 0.089 12.5 4.7 0.13 11.9 4.7 1.2 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 MAGI_u1 PF16663.5 ORF32600 - 0.28 11.3 1.1 0.61 10.2 1.1 1.5 1 0 0 1 1 1 0 Unstructured region on MAGI Ribosomal_L3 PF00297.22 ORF31804 - 4.5e-15 55.5 8.1 1.1e-14 54.2 6.4 2.1 1 1 1 2 2 2 2 Ribosomal protein L3 Glyco_transf_25 PF01755.17 ORF31116 - 0.0099 15.8 0.1 0.051 13.4 0.1 1.9 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) Methyltransf_23 PF13489.6 ORF28569 - 4.7e-05 23.3 0.0 5.5e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF28569 - 0.00045 20.8 0.0 0.00076 20.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF28569 - 0.018 15.7 0.0 0.039 14.7 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 ORF28569 - 0.04 14.7 0.0 0.083 13.6 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Asp_protease PF09668.10 ORF26506 - 2e-15 56.7 0.2 3.8e-15 55.8 0.2 1.5 1 0 0 1 1 1 1 Aspartyl protease ubiquitin PF00240.23 ORF26506 - 1e-08 34.8 0.2 1.5e-08 34.3 0.2 1.3 1 0 0 1 1 1 1 Ubiquitin family gag-asp_proteas PF13975.6 ORF26506 - 4.5e-05 23.9 0.6 0.00012 22.5 0.0 2.0 2 0 0 2 2 2 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 ORF26506 - 0.018 15.7 0.0 0.05 14.2 0.0 1.8 1 0 0 1 1 1 0 Aspartyl protease Ubiquitin_4 PF18036.1 ORF26506 - 0.027 14.5 1.0 1.4 9.0 0.0 2.3 1 1 1 2 2 2 0 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF26506 - 0.076 13.0 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain RVP PF00077.20 ORF26506 - 0.096 13.0 0.0 0.18 12.1 0.0 1.5 1 0 0 1 1 1 0 Retroviral aspartyl protease UN_NPL4 PF11543.8 ORF26506 - 0.14 12.7 0.1 0.34 11.4 0.1 1.7 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Nrap_D3 PF17404.2 ORF26506 - 0.15 12.1 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Nrap protein domain 3 MaoC_dehydratas PF01575.19 ORF26089 - 1.9e-16 59.7 0.0 1.1e-15 57.3 0.0 1.9 2 0 0 2 2 2 1 MaoC like domain YcgR_2 PF12945.7 ORF26089 - 0.031 14.4 0.0 0.069 13.3 0.0 1.6 1 0 0 1 1 1 0 Flagellar protein YcgR DUF1899 PF08953.11 ORF24948 - 0.16 11.9 0.0 0.38 10.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1899) Homeobox_KN PF05920.11 ORF24065 - 8.4e-16 57.6 2.4 2e-15 56.4 2.4 1.7 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF24065 - 6.5e-06 25.9 0.7 1.7e-05 24.5 0.7 1.8 1 0 0 1 1 1 1 Homeodomain Mito_carr PF00153.27 ORF24043 - 4.9e-32 109.7 5.9 4.4e-21 74.6 0.2 2.9 3 0 0 3 3 3 2 Mitochondrial carrier protein Kelch_1 PF01344.25 ORF21405 - 0.0042 16.6 0.0 0.015 14.9 0.0 2.0 2 0 0 2 2 2 1 Kelch motif Kelch_2 PF07646.15 ORF21405 - 0.13 12.3 0.0 9.2 6.4 0.0 2.6 2 1 0 2 2 2 0 Kelch motif Ank_2 PF12796.7 ORF20114 - 5.4e-12 46.1 0.1 4e-08 33.7 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF20114 - 3.1e-09 37.2 0.0 0.0037 17.8 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF20114 - 3.8e-07 30.3 2.5 0.18 12.3 0.1 4.4 4 1 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 ORF20114 - 7.7e-07 28.9 0.5 0.059 13.9 0.0 3.5 3 1 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF20114 - 1.3e-06 28.6 0.3 0.02 15.2 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF1940 - 5.4e-12 46.1 0.1 4e-08 33.7 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF1940 - 3.1e-09 37.2 0.0 0.0037 17.8 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF1940 - 3.8e-07 30.3 2.5 0.18 12.3 0.1 4.4 4 1 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 ORF1940 - 7.7e-07 28.9 0.5 0.059 13.9 0.0 3.5 3 1 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF1940 - 1.3e-06 28.6 0.3 0.02 15.2 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Aldose_epim PF01263.20 ORF17959 - 2.1e-39 135.6 0.0 2.4e-39 135.4 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase Homeobox_KN PF05920.11 ORF17908 - 8.6e-16 57.6 2.4 2e-15 56.4 2.4 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF17908 - 6.6e-06 25.9 0.7 1.7e-05 24.5 0.7 1.8 1 0 0 1 1 1 1 Homeodomain RRM_1 PF00076.22 ORF14901 - 2.9e-08 33.4 0.0 0.01 15.7 0.0 2.7 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF14901 - 0.038 13.6 0.0 0.07 12.7 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF924 PF06041.11 ORF1450 - 7e-46 156.6 3.8 7.9e-46 156.4 3.8 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) Sigma70_r2 PF04542.14 ORF1450 - 0.051 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70 region 2 Methyltransf_23 PF13489.6 ORF13532 - 4.7e-05 23.3 0.0 5.5e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF13532 - 0.00045 20.8 0.0 0.00076 20.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF13532 - 0.018 15.7 0.0 0.039 14.7 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 ORF13532 - 0.04 14.7 0.0 0.083 13.6 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Homeodomain PF00046.29 ORF1196 - 0.015 15.2 0.1 0.03 14.1 0.1 1.5 1 0 0 1 1 1 0 Homeodomain OrfB_Zn_ribbon PF07282.11 ORF1196 - 0.038 13.9 0.2 0.12 12.3 0.2 1.8 1 0 0 1 1 1 0 Putative transposase DNA-binding domain APG6_N PF17675.1 ORF112408 - 0.006 17.1 8.7 0.006 17.1 8.7 2.8 2 1 1 3 3 3 1 Apg6 coiled-coil region UPF0242 PF06785.11 ORF112408 - 0.018 15.2 25.3 0.42 10.7 1.9 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Csm1_N PF18504.1 ORF112408 - 0.023 15.0 1.7 0.023 15.0 1.7 4.7 1 1 2 4 4 4 0 Csm1 N-terminal domain bZIP_1 PF00170.21 ORF112408 - 0.18 11.9 27.2 3.9 7.6 1.7 4.4 3 1 0 4 4 4 0 bZIP transcription factor FlxA PF14282.6 ORF112408 - 0.21 11.6 18.0 0.41 10.7 3.5 3.6 2 1 2 4 4 4 0 FlxA-like protein DUF4407 PF14362.6 ORF112408 - 0.22 10.8 11.3 1 8.7 11.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FlaC_arch PF05377.11 ORF112408 - 0.44 11.0 22.7 0.5 10.8 1.9 4.7 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) CENP-F_leu_zip PF10473.9 ORF112408 - 0.48 10.4 27.8 0.17 11.9 1.3 3.9 1 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1192 PF06698.11 ORF112408 - 0.49 10.5 3.7 2.6 8.2 0.2 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1192) DUF4790 PF16037.5 ORF112408 - 1.2 9.6 7.6 0.18 12.3 1.5 2.6 2 2 1 3 3 3 0 Domain of unknown function (DUF4790) FapA PF03961.13 ORF112408 - 1.5 7.4 23.9 0.28 9.7 11.8 2.3 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF948 PF06103.11 ORF112408 - 1.6 9.0 13.7 8.4 6.7 0.3 3.9 1 1 3 4 4 4 0 Bacterial protein of unknown function (DUF948) DUF2203 PF09969.9 ORF112408 - 2.8 8.7 15.8 4 8.2 0.9 3.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF1664 PF07889.12 ORF112408 - 3.2 7.8 19.7 6.1 6.9 4.4 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DUF724 PF05266.14 ORF112408 - 4 7.2 22.6 0.49 10.2 5.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF724) GAS PF13851.6 ORF112408 - 6.4 6.1 33.2 2.6 7.4 9.8 3.3 1 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding DUF1295 PF06966.12 ORF112198 - 4.2e-45 154.1 0.9 4.7e-45 153.9 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF112198 - 2.3e-09 37.6 1.5 3.2e-09 37.1 0.3 1.8 1 1 0 1 1 1 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF112198 - 3.2e-09 36.9 4.9 4.3e-09 36.5 4.9 1.2 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ERG4_ERG24 PF01222.17 ORF112198 - 7.6e-06 24.9 2.4 1.1e-05 24.4 2.4 1.2 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family ICMT PF04140.14 ORF112198 - 1.1e-05 25.7 0.2 2.5e-05 24.6 0.2 1.6 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family MerC PF03203.14 ORF112198 - 0.0036 17.8 0.4 0.0069 16.8 0.1 1.6 1 1 1 2 2 2 1 MerC mercury resistance protein FPP PF05911.11 ORF109771 - 0.0033 15.7 8.7 0.0045 15.3 8.7 1.1 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil DHR10 PF18595.1 ORF109771 - 0.011 15.8 3.2 0.011 15.8 3.2 2.1 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Fib_alpha PF08702.10 ORF109771 - 0.011 15.9 9.6 0.011 15.9 9.6 1.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family PspA_IM30 PF04012.12 ORF109771 - 0.017 14.7 3.3 0.77 9.3 0.2 2.2 1 1 1 2 2 2 0 PspA/IM30 family DUF5082 PF16888.5 ORF109771 - 0.018 15.3 4.6 0.018 15.3 4.6 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) Cep57_CLD PF14073.6 ORF109771 - 0.02 14.9 8.6 0.038 14.0 8.6 1.4 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 Sec2p PF06428.11 ORF109771 - 0.024 14.6 2.6 0.028 14.4 0.5 2.2 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p TACC_C PF05010.14 ORF109771 - 0.024 14.4 10.1 0.047 13.5 10.1 1.4 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal GAS PF13851.6 ORF109771 - 0.028 13.8 8.1 0.06 12.7 8.1 1.6 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Csm1_N PF18504.1 ORF109771 - 0.066 13.6 0.2 0.066 13.6 0.2 3.2 2 1 0 3 3 3 0 Csm1 N-terminal domain Syntaxin-6_N PF09177.11 ORF109771 - 0.081 13.5 3.2 0.19 12.3 3.2 1.6 1 0 0 1 1 1 0 Syntaxin 6, N-terminal DUF3450 PF11932.8 ORF109771 - 0.16 11.3 7.4 0.042 13.1 4.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF4349 PF14257.6 ORF109771 - 0.19 11.2 2.0 0.27 10.7 2.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF5365 PF17326.2 ORF109771 - 0.29 11.6 4.3 0.14 12.6 2.1 1.6 2 0 0 2 2 1 0 Family of unknown function (DUF5365) WEMBL PF05701.11 ORF109771 - 0.42 9.2 7.9 0.51 9.0 7.9 1.1 1 0 0 1 1 1 0 Weak chloroplast movement under blue light Phage_GP20 PF06810.11 ORF109771 - 0.47 10.2 6.3 0.12 12.1 2.1 2.1 2 1 1 3 3 3 0 Phage minor structural protein GP20 UPF0242 PF06785.11 ORF109771 - 0.58 10.2 13.3 0.16 12.0 9.1 2.0 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus HAUS6_N PF14661.6 ORF109771 - 0.68 9.5 5.9 1.1 8.8 5.9 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus SlyX PF04102.12 ORF109771 - 0.93 10.2 5.8 0.75 10.5 0.6 2.7 2 1 0 3 3 2 0 SlyX FliJ PF02050.16 ORF109771 - 1.8 8.8 9.7 0.99 9.6 7.5 1.7 2 0 0 2 2 1 0 Flagellar FliJ protein PIN_8 PF18476.1 ORF109771 - 2.1 8.1 8.9 0.66 9.8 5.4 1.8 2 0 0 2 2 2 0 PIN like domain ABC_tran_CTD PF16326.5 ORF109771 - 2.3 8.5 7.1 6.9 7.0 2.8 3.0 2 1 1 3 3 3 0 ABC transporter C-terminal domain APG6_N PF17675.1 ORF109771 - 2.8 8.5 9.0 5.7 7.5 9.0 1.5 1 0 0 1 1 1 0 Apg6 coiled-coil region TSC22 PF01166.18 ORF109771 - 3.3 8.1 10.4 1.2 9.4 0.3 3.4 2 1 2 4 4 3 0 TSC-22/dip/bun family FAM76 PF16046.5 ORF109771 - 3.4 6.9 10.0 0.62 9.4 6.8 1.4 2 0 0 2 2 2 0 FAM76 protein DUF4407 PF14362.6 ORF109771 - 3.7 6.8 6.1 4.6 6.5 2.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) ZapB PF06005.12 ORF109771 - 6.2 7.3 8.6 2.6 8.5 0.7 2.8 2 1 1 3 3 2 0 Cell division protein ZapB PRKG1_interact PF15898.5 ORF109771 - 8.8 7.3 14.0 0.35 11.8 2.5 2.6 2 1 1 3 3 3 0 cGMP-dependent protein kinase interacting domain Aldose_epim PF01263.20 ORF109314 - 2.1e-39 135.6 0.0 2.4e-39 135.4 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase SH3_15 PF18346.1 ORF107843 - 0.0002 21.6 3.4 0.15 12.4 0.6 2.6 2 1 0 2 2 2 2 Mind bomb SH3 repeat domain DUF3553 PF12073.8 ORF107843 - 0.0011 18.7 0.9 0.068 12.9 0.2 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3553) Pellino PF04710.14 ORF105799 - 0.01 14.5 1.2 0.011 14.4 1.2 1.1 1 0 0 1 1 1 0 Pellino EF-hand_7 PF13499.6 ORF105799 - 0.011 16.2 1.1 0.15 12.5 1.1 2.6 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF105799 - 0.13 12.3 0.7 28 5.0 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain Sigma_reg_C PF13791.6 ORF105799 - 3 8.0 10.5 1.4 9.1 5.0 2.9 2 1 1 3 3 3 0 Sigma factor regulator C-terminal Endostatin PF06482.11 ORF105458 - 2.8 7.3 5.8 3.6 7.0 5.8 1.1 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin CDK2AP PF09806.9 ORF102917 - 0.022 14.8 0.0 0.03 14.4 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein DUF5549 PF17703.1 NODE_34765_length_622_cov_4.965928_g27807_i0forward_frame_1 - 0.0057 16.3 4.4 0.0085 15.8 4.4 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5549) TMEM251 PF15190.6 NODE_34764_length_622_cov_7.749574_g27806_i0forward_frame_1 - 0.011 15.7 0.5 0.022 14.7 0.0 1.7 2 0 0 2 2 2 0 Transmembrane protein 251 DUF2304 PF10066.9 NODE_34764_length_622_cov_7.749574_g27806_i0forward_frame_1 - 6.4 7.0 13.5 3 8.1 3.6 2.5 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) TMEM141 PF15110.6 NODE_34742_length_622_cov_148.768313_g27785_i0forward_frame_1 - 0.55 10.9 4.0 0.32 11.6 0.8 2.2 1 1 3 4 4 4 0 TMEM141 protein family Peptidase_C2 PF00648.21 NODE_34719_length_623_cov_2.671769_g27764_i0reverse_frame_1 - 1.6e-18 66.8 0.0 6.6e-18 64.7 0.0 1.8 1 1 0 1 1 1 1 Calpain family cysteine protease ABC_membrane PF00664.23 NODE_34693_length_623_cov_145.807823_g27740_i0reverse_frame_1 - 1.9e-10 40.9 0.1 2.9e-10 40.3 0.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF2207 PF09972.9 NODE_34693_length_623_cov_145.807823_g27740_i0reverse_frame_1 - 0.0047 15.7 0.1 0.0056 15.5 0.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF2783 PF10932.8 NODE_34693_length_623_cov_145.807823_g27740_i0reverse_frame_1 - 0.13 12.0 0.2 0.48 10.1 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2783) TDRP PF15683.5 NODE_34686_length_623_cov_184.593537_g27733_i0forward_frame_1 - 0.008 16.2 4.1 0.008 16.2 4.1 1.9 2 0 0 2 2 2 1 Testis development-related protein Usher PF00577.20 NODE_34671_length_624_cov_2.212224_g27722_i0forward_frame_1 - 1.7e-60 205.5 8.8 1.9e-60 205.3 8.8 1.0 1 0 0 1 1 1 1 Outer membrane usher protein DUF4888 PF16229.5 NODE_34671_length_624_cov_2.212224_g27722_i0forward_frame_1 - 0.00065 19.7 0.8 0.00094 19.2 0.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4888) OEP PF02321.18 NODE_34671_length_624_cov_2.212224_g27722_i0forward_frame_1 - 0.0043 16.9 4.1 0.14 11.9 0.2 2.5 2 1 0 2 2 2 2 Outer membrane efflux protein DUF2688 PF10892.8 NODE_34669_length_624_cov_2.938879_g27720_i0reverse_frame_1 - 0.099 12.1 3.4 1.2 8.7 1.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) DUF5535 PF17687.1 NODE_34664_length_624_cov_66.314092_g27716_i0reverse_frame_1 - 0.2 11.8 1.2 0.34 11.1 1.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5535) YABBY PF04690.13 NODE_34664_length_624_cov_66.314092_g27716_i0reverse_frame_1 - 1.5 9.3 7.4 2.3 8.8 7.4 1.2 1 0 0 1 1 1 0 YABBY protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks94.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks94.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks94.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks94.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:21:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SH3_4 PF06347.13 NODE_34654_length_624_cov_100.870968_g27706_i0forward_frame_1 - 9.8e-07 28.5 0.0 3.4e-06 26.8 0.0 1.9 1 0 0 1 1 1 1 Bacterial SH3 domain SH3_3 PF08239.11 NODE_34654_length_624_cov_100.870968_g27706_i0forward_frame_1 - 0.11 12.7 0.0 0.23 11.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial SH3 domain EF-hand_6 PF13405.6 NODE_34631_length_624_cov_340.393888_g27683_i0forward_frame_1 - 8.3e-07 28.5 0.1 0.012 15.5 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 NODE_34631_length_624_cov_340.393888_g27683_i0forward_frame_1 - 8.9e-07 29.3 0.1 1.6e-06 28.5 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_34631_length_624_cov_340.393888_g27683_i0forward_frame_1 - 1.2e-06 27.7 0.3 0.0011 18.4 0.1 2.4 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 NODE_34631_length_624_cov_340.393888_g27683_i0forward_frame_1 - 4.9e-06 25.7 0.0 0.042 13.4 0.1 2.4 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_34631_length_624_cov_340.393888_g27683_i0forward_frame_1 - 0.00011 22.0 0.2 0.29 11.0 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain pair PHY PF00360.20 NODE_34631_length_624_cov_340.393888_g27683_i0forward_frame_1 - 0.026 13.8 0.0 0.033 13.5 0.0 1.2 1 0 0 1 1 1 0 Phytochrome region SPARC_Ca_bdg PF10591.9 NODE_34631_length_624_cov_340.393888_g27683_i0forward_frame_1 - 0.13 12.6 0.1 4.4 7.7 0.0 2.2 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region DUF3902 PF13042.6 NODE_34629_length_624_cov_363.986418_g27681_i0forward_frame_1 - 0.01 15.5 3.0 0.01 15.5 3.0 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3902) DUF4672 PF15716.5 NODE_34617_length_625_cov_3.405085_g27671_i0forward_frame_2 - 0.19 11.3 0.0 0.3 10.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) POLO_box PF00659.18 NODE_34614_length_625_cov_57.735593_g27668_i0reverse_frame_3 - 1.1e-12 48.0 0.6 1.9e-12 47.2 0.6 1.4 1 0 0 1 1 1 1 POLO box duplicated region Rcd1 PF04078.13 NODE_34603_length_625_cov_123.325424_g27657_i0reverse_frame_2 - 7.2e-28 97.6 0.1 1e-27 97.1 0.1 1.2 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like Topo_Zn_Ribbon PF08272.11 NODE_34603_length_625_cov_123.325424_g27657_i0reverse_frame_2 - 1.3 8.7 4.8 1.2 8.9 0.1 2.7 3 0 0 3 3 3 0 Topoisomerase I zinc-ribbon-like Chordopox_RPO7 PF05864.12 NODE_34603_length_625_cov_123.325424_g27657_i0forward_frame_2 - 0.044 14.0 0.1 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) LAP1C PF05609.12 NODE_34602_length_625_cov_123.347458_g27656_i0reverse_frame_2 - 4.5 6.3 23.9 5 6.1 23.9 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) BID PF06393.11 NODE_34596_length_625_cov_146.447458_g27650_i0forward_frame_2 - 0.016 14.7 0.0 0.024 14.2 0.0 1.2 1 0 0 1 1 1 0 BH3 interacting domain (BID) mit_SMPDase PF14724.6 NODE_34594_length_625_cov_169.332203_g27392_i1reverse_frame_3 - 0.01 13.8 1.2 0.012 13.6 1.2 1.1 1 0 0 1 1 1 0 Mitochondrial-associated sphingomyelin phosphodiesterase INSIG PF07281.12 NODE_34594_length_625_cov_169.332203_g27392_i1forward_frame_2 - 0.12 12.0 2.1 14 5.2 0.1 3.2 1 1 2 3 3 3 0 Insulin-induced protein (INSIG) FGFR3_TM PF18123.1 NODE_34594_length_625_cov_169.332203_g27392_i1forward_frame_2 - 1.9 8.1 10.0 1.7 8.2 1.1 2.5 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain TMEM72 PF16054.5 NODE_34589_length_625_cov_253.996610_g11668_i1reverse_frame_2 - 9.6e-05 22.2 1.0 0.00019 21.2 1.0 1.4 1 0 0 1 1 1 1 Transmembrane protein family 72 SUKH-3 PF14433.6 NODE_34572_length_626_cov_1.884941_g27633_i0reverse_frame_3 - 0.13 12.7 0.0 0.23 11.9 0.0 1.5 2 0 0 2 2 2 0 SUKH-3 immunity protein Peptidase_M16 PF00675.20 NODE_34565_length_626_cov_3.106599_g27626_i0reverse_frame_3 - 0.021 14.8 1.3 0.045 13.7 1.1 1.7 1 1 0 1 1 1 0 Insulinase (Peptidase family M16) CPSase_L_D2 PF02786.17 NODE_34565_length_626_cov_3.106599_g27626_i0reverse_frame_3 - 0.025 14.1 0.9 0.035 13.6 0.9 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Intron_maturas2 PF01348.21 NODE_34556_length_626_cov_32.942470_g1940_i5forward_frame_3 - 0.0049 16.8 0.3 0.007 16.3 0.3 1.4 1 0 0 1 1 1 1 Type II intron maturase PG_binding_2 PF08823.11 NODE_34548_length_626_cov_100.417936_g27611_i0reverse_frame_3 - 0.18 12.1 0.0 0.36 11.2 0.0 1.4 1 0 0 1 1 1 0 Putative peptidoglycan binding domain MHC_I_2 PF14586.6 NODE_34534_length_626_cov_204.539763_g27598_i0reverse_frame_3 - 0.16 11.9 1.1 0.8 9.5 1.1 2.0 1 1 0 1 1 1 0 Class I Histocompatibility antigen, NKG2D ligand, domains 1 and 2 Herpes_PAP PF03325.13 NODE_34522_length_626_cov_686.566836_g12383_i2forward_frame_2 - 0.075 12.6 0.4 0.11 12.0 0.4 1.3 1 0 0 1 1 1 0 Herpesvirus polymerase accessory protein Cellulose_synt PF03552.14 NODE_34514_length_627_cov_3.106419_g27580_i0forward_frame_3 - 6.1 5.2 6.2 7.5 4.9 6.2 1.1 1 0 0 1 1 1 0 Cellulose synthase Glyco_transf_41 PF13844.6 NODE_34514_length_627_cov_3.106419_g27580_i0forward_frame_2 - 0.97 7.8 6.3 1 7.7 6.3 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 41 OEP PF02321.18 NODE_34512_length_627_cov_3.521959_g27578_i0forward_frame_3 - 2.2e-20 73.3 11.9 2.8e-20 72.9 11.9 1.1 1 0 0 1 1 1 1 Outer membrane efflux protein HigB-like_toxin PF05015.13 NODE_34512_length_627_cov_3.521959_g27578_i0forward_frame_3 - 0.048 14.1 0.0 0.2 12.1 0.0 1.9 1 1 1 2 2 2 0 RelE-like toxin of type II toxin-antitoxin system HigB BRX_assoc PF16627.5 NODE_34512_length_627_cov_3.521959_g27578_i0forward_frame_3 - 0.11 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Unstructured region between BRX_N and BRX domain SRP14 PF02290.15 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_3 - 0.00025 21.4 0.0 0.00059 20.2 0.0 1.6 1 0 0 1 1 1 1 Signal recognition particle 14kD protein PBP1_TM PF14812.6 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_3 - 0.00033 21.0 0.1 0.00055 20.3 0.1 1.3 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Mito_morph_reg PF14972.6 NODE_34488_length_627_cov_277.402027_g27554_i0reverse_frame_2 - 0.14 11.8 0.2 0.18 11.4 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator DUF3136 PF11334.8 NODE_34488_length_627_cov_277.402027_g27554_i0forward_frame_2 - 0.18 11.6 0.9 0.39 10.6 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3136) DUF4381 PF14316.6 NODE_34486_length_627_cov_315.819257_g27553_i0forward_frame_2 - 0.19 12.0 0.0 0.26 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) bZIP_1 PF00170.21 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 5.7e-08 32.7 9.6 5.7e-08 32.7 9.6 2.5 2 0 0 2 2 2 1 bZIP transcription factor bZIP_2 PF07716.15 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 0.00038 20.5 14.7 0.00038 20.5 14.7 2.6 3 0 0 3 3 2 1 Basic region leucine zipper RR_TM4-6 PF06459.12 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 0.046 13.6 13.1 0.059 13.2 13.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Ndc1_Nup PF09531.10 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 0.11 11.2 4.0 0.12 11.0 4.0 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DDHD PF02862.17 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 0.19 11.9 4.9 0.25 11.5 4.9 1.3 1 0 0 1 1 1 0 DDHD domain Vfa1 PF08432.10 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 0.27 11.5 20.8 0.37 11.1 20.8 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Presenilin PF01080.17 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 0.56 8.9 11.7 0.66 8.7 11.7 1.1 1 0 0 1 1 1 0 Presenilin TraH PF06122.11 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 0.59 9.4 5.1 0.75 9.0 5.1 1.2 1 0 0 1 1 1 0 Conjugative relaxosome accessory transposon protein CDC45 PF02724.14 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 0.78 8.0 19.4 0.96 7.7 19.4 1.1 1 0 0 1 1 1 0 CDC45-like protein LMBR1 PF04791.16 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 0.9 8.4 9.6 1.1 8.1 9.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein AAA_11 PF13086.6 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 2.1 8.1 15.5 3.1 7.5 15.5 1.3 1 0 0 1 1 1 0 AAA domain SOBP PF15279.6 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 3.3 8.2 7.4 4 8.0 7.4 1.1 1 0 0 1 1 1 0 Sine oculis-binding protein VSG_B PF13206.6 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 3.6 6.7 15.8 4.5 6.4 15.8 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain GREB1 PF15782.5 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 4.2 4.3 13.5 5.3 4.0 13.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer NPAT_C PF15712.5 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 7.2 5.1 21.4 9.3 4.8 21.4 1.1 1 0 0 1 1 1 0 NPAT C terminus XRN_M PF17846.1 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 8.2 5.3 15.8 10 4.9 15.8 1.1 1 0 0 1 1 1 0 Xrn1 helical domain Neur_chan_memb PF02932.16 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_3 - 8.6 6.3 9.6 12 5.9 9.6 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Presenilin PF01080.17 NODE_34485_length_627_cov_434.207770_g27552_i0forward_frame_2 - 1.3 7.7 2.8 1.5 7.5 2.8 1.1 1 0 0 1 1 1 0 Presenilin WWE PF02825.20 ORF9852 - 0.00011 22.7 0.0 0.00023 21.7 0.0 1.5 1 0 0 1 1 1 1 WWE domain DnaJ PF00226.31 ORF9852 - 0.0093 16.1 0.5 0.021 15.0 0.0 1.8 2 0 0 2 2 2 1 DnaJ domain TRP PF06011.12 ORF97728 - 7.2e-05 21.7 16.2 0.00013 20.8 15.9 1.6 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel Beta-lactamase PF00144.24 ORF97492 - 1.8e-08 34.0 0.1 2.2e-08 33.7 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase MIP PF00230.20 ORF96787 - 2.5e-13 50.3 0.6 2.8e-13 50.1 0.6 1.0 1 0 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF96787 - 0.029 13.8 0.2 0.089 12.2 0.2 1.9 1 0 0 1 1 1 0 Transmembrane alpha-helix domain SL4P PF17618.2 ORF95568 - 0.04 13.9 0.2 0.093 12.8 0.2 1.6 1 0 0 1 1 1 0 Uncharacterized Strongylid L4 protein DUF5507 PF17612.2 ORF94081 - 0.08 12.7 0.6 0.11 12.3 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5507) T4-gp15_tss PF16724.5 ORF93529 - 0.046 13.5 0.0 0.062 13.1 0.0 1.3 1 0 0 1 1 1 0 T4-like virus Myoviridae tail sheath stabiliser Chromate_transp PF02417.15 ORF89919 - 0.05 13.7 0.5 0.078 13.1 0.5 1.2 1 0 0 1 1 1 0 Chromate transporter ABC_cobalt PF09819.9 ORF89919 - 0.081 13.1 1.5 0.14 12.3 1.5 1.3 1 0 0 1 1 1 0 ABC-type cobalt transport system, permease component U-box PF04564.15 ORF87911 - 1.4 9.2 4.8 2.2 8.5 0.3 2.9 2 1 0 2 2 2 0 U-box domain Hint_2 PF13403.6 ORF87812 - 7.6e-08 32.8 0.1 6.6e-07 29.7 0.1 2.2 1 1 0 1 1 1 1 Hint domain Hint PF01079.20 ORF87812 - 0.0025 17.4 0.0 0.0039 16.7 0.0 1.3 1 1 0 1 1 1 1 Hint module Sod_Fe_C PF02777.18 ORF87379 - 3.3e-41 139.6 0.2 8e-41 138.4 0.0 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 ORF87379 - 7.5e-34 116.1 2.2 1.2e-33 115.4 2.2 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain DUF4600 PF15372.6 ORF87379 - 0.16 12.4 0.0 0.31 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4600) Exo_endo_phos PF03372.23 ORF87361 - 1.6e-06 27.8 0.0 2e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family PCMT PF01135.19 ORF87056 - 2.8e-82 275.6 0.0 3.3e-82 275.3 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 ORF87056 - 7.3e-07 28.5 0.0 9.2e-07 28.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.6 ORF87056 - 9.4e-06 25.5 0.0 1.6e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF87056 - 2.9e-05 24.7 0.0 5.4e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF87056 - 0.0036 17.9 0.0 0.01 16.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF87056 - 0.013 15.3 0.0 0.022 14.6 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain NodS PF05401.11 ORF87056 - 0.014 15.0 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) CMAS PF02353.20 ORF87056 - 0.051 12.9 0.0 0.083 12.2 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase GCD14 PF08704.10 ORF87056 - 0.083 12.5 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_32 PF13679.6 ORF87056 - 0.11 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 ORF87056 - 0.15 11.6 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain DREV PF05219.12 ORF87056 - 0.16 11.1 0.0 0.25 10.4 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase CLZ PF16526.5 ORF86577 - 0.0057 17.0 1.2 0.015 15.6 0.7 1.8 2 0 0 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF3573 PF12097.8 ORF86577 - 0.014 14.2 0.2 0.018 13.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) GCP_C_terminal PF04130.13 ORF86577 - 0.041 13.4 0.1 0.05 13.1 0.1 1.2 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal Prok-RING_4 PF14447.6 ORF85848 - 5.4e-05 23.0 7.4 5.4e-05 23.0 7.4 3.5 3 2 0 3 3 3 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF85848 - 7.5e-05 22.5 5.9 7.5e-05 22.5 5.9 4.6 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF85848 - 0.012 15.4 5.3 0.012 15.4 5.3 3.7 4 0 0 4 4 4 0 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 ORF85848 - 1.6 8.8 18.8 0.12 12.3 5.9 3.2 2 2 0 2 2 2 0 Transposase zinc-ribbon domain Na_Ca_ex_C PF16494.5 ORF8417 - 1.1 9.7 6.6 1.1 9.7 2.7 2.2 2 0 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain TRP PF06011.12 ORF83898 - 7.2e-05 21.7 16.2 0.00013 20.8 15.9 1.6 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel FabA PF07977.13 ORF83826 - 1.3e-52 177.1 0.0 1.6e-52 176.8 0.0 1.1 1 0 0 1 1 1 1 FabA-like domain PITH PF06201.13 ORF8347 - 5.4e-32 111.1 0.0 6.5e-32 110.8 0.0 1.1 1 0 0 1 1 1 1 PITH domain Csm1 PF12539.8 ORF8347 - 0.095 13.3 0.0 0.15 12.7 0.0 1.3 1 0 0 1 1 1 0 Chromosome segregation protein Csm1/Pcs1 FliM PF02154.15 ORF82980 - 0.0078 16.1 0.1 0.014 15.3 0.1 1.4 1 1 0 1 1 1 1 Flagellar motor switch protein FliM Endopep_inhib PF16800.5 ORF82980 - 0.032 14.2 0.1 0.045 13.7 0.1 1.2 1 0 0 1 1 1 0 IseA DL-endopeptidase inhibitor IFT57 PF10498.9 ORF82978 - 1.4e-13 50.6 8.0 1.8e-13 50.2 8.0 1.2 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 FlaC_arch PF05377.11 ORF82978 - 0.0066 16.8 0.4 0.0066 16.8 0.4 3.4 2 1 1 3 3 3 1 Flagella accessory protein C (FlaC) TraF_2 PF13729.6 ORF82978 - 0.013 14.9 2.7 0.088 12.2 2.0 2.1 1 1 1 2 2 2 0 F plasmid transfer operon, TraF, protein Seryl_tRNA_N PF02403.22 ORF82978 - 0.024 14.9 4.6 0.065 13.5 4.0 2.0 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain T3SSipB PF16535.5 ORF82978 - 0.065 13.7 2.5 0.12 12.9 2.5 1.5 1 0 0 1 1 1 0 Type III cell invasion protein SipB DHR10 PF18595.1 ORF82978 - 0.067 13.3 6.0 0.13 12.3 0.6 2.6 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain FliD_N PF02465.18 ORF82978 - 0.075 13.7 9.0 3.1 8.6 0.3 3.5 1 1 2 3 3 3 0 Flagellar hook-associated protein 2 N-terminus DUF244 PF03112.14 ORF82978 - 0.16 11.8 12.1 0.063 13.1 2.9 2.2 1 1 1 2 2 2 0 Uncharacterized protein family (ORF7) DUF DUF4363 PF14276.6 ORF82978 - 0.17 12.0 10.5 0.42 10.8 4.7 2.5 1 1 0 2 2 2 0 Domain of unknown function (DUF4363) BPL_N PF09825.9 ORF82978 - 0.41 9.7 4.5 0.53 9.3 4.5 1.2 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal UPF0242 PF06785.11 ORF82978 - 0.56 10.3 10.5 1.5 8.9 10.2 1.8 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF1664 PF07889.12 ORF82978 - 0.87 9.6 5.7 2.2 8.4 3.4 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Med9 PF07544.13 ORF82978 - 1.2 9.3 9.1 0.26 11.4 2.4 2.6 2 1 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 NPV_P10 PF05531.12 ORF82978 - 1.4 9.5 6.5 23 5.5 5.1 3.1 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein APG6_N PF17675.1 ORF82978 - 1.6 9.2 8.4 2.8 8.5 6.9 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region Fib_alpha PF08702.10 ORF82978 - 1.8 8.7 9.9 2.3 8.4 7.7 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family IclR PF01614.18 ORF82266 - 4.7e-42 142.9 0.0 7.1e-42 142.3 0.0 1.2 1 0 0 1 1 1 1 Bacterial transcriptional regulator ATP_bind_1 PF03029.17 ORF81389 - 6e-52 176.8 0.0 6.8e-52 176.6 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein MIP PF00230.20 ORF80472 - 2.5e-13 50.3 0.6 2.8e-13 50.1 0.6 1.0 1 0 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF80472 - 0.029 13.8 0.2 0.089 12.2 0.2 1.9 1 0 0 1 1 1 0 Transmembrane alpha-helix domain DUF4647 PF15504.6 ORF79775 - 0.00069 18.8 2.4 0.00091 18.5 2.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4647) DAG_kinase_N PF14513.6 ORF79775 - 0.006 16.8 2.3 0.006 16.8 2.3 1.8 2 0 0 2 2 2 1 Diacylglycerol kinase N-terminus RIG-I_C-RD PF11648.8 ORF79775 - 0.018 15.3 0.1 0.03 14.5 0.1 1.4 1 0 0 1 1 1 0 C-terminal domain of RIG-I Interferon PF00143.19 ORF79775 - 0.023 14.9 1.1 0.31 11.2 0.0 2.1 2 0 0 2 2 2 0 Interferon alpha/beta domain FAD_binding_1 PF00667.20 ORF77237 - 2.9e-17 63.0 0.0 4.4e-16 59.1 0.0 2.1 1 1 0 1 1 1 1 FAD binding domain Flavodoxin_1 PF00258.25 ORF77237 - 0.011 16.0 0.1 0.02 15.1 0.1 1.5 1 0 0 1 1 1 0 Flavodoxin Neugrin PF06413.11 ORF77237 - 0.06 13.4 0.2 0.094 12.7 0.2 1.3 1 0 0 1 1 1 0 Neugrin Importin_rep_6 PF18829.1 ORF76240 - 0.034 14.3 3.3 0.067 13.3 3.3 1.4 1 0 0 1 1 1 0 Importin repeat 6 Hydin_ADK PF17213.3 ORF76240 - 0.52 10.6 5.0 0.73 10.1 5.0 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain LAL_C2 PF18603.1 ORF75860 - 4.3e-05 23.6 0.0 8.7e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 L-amino acid ligase C-terminal domain 2 ATPgrasp_Ter PF15632.6 ORF75860 - 0.13 12.0 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon ApoLp-III PF07464.11 ORF75111 - 0.012 15.8 0.1 0.016 15.3 0.1 1.2 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) FlxA PF14282.6 ORF75111 - 0.013 15.5 0.1 0.029 14.3 0.1 1.6 1 1 0 1 1 1 0 FlxA-like protein DUF4404 PF14357.6 ORF75111 - 0.018 15.7 2.2 0.048 14.3 0.3 2.6 2 2 0 2 2 2 0 Domain of unknown function (DUF4404) Filament PF00038.21 ORF75111 - 0.018 14.6 0.5 0.018 14.6 0.5 2.0 2 1 0 2 2 2 0 Intermediate filament protein LXG PF04740.12 ORF75111 - 0.033 13.9 0.3 0.085 12.6 0.2 1.7 1 1 1 2 2 2 0 LXG domain of WXG superfamily HMMR_N PF15905.5 ORF75111 - 0.035 13.6 0.3 0.06 12.8 0.3 1.4 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Fib_alpha PF08702.10 ORF75111 - 0.076 13.2 0.6 0.13 12.4 0.6 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF724 PF05266.14 ORF75111 - 0.078 12.8 0.6 0.12 12.2 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Baculo_PEP_C PF04513.12 ORF75111 - 0.081 13.0 0.4 0.36 10.9 0.4 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus EzrA PF06160.12 ORF75111 - 0.085 11.0 0.9 0.1 10.8 0.9 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA WXG100 PF06013.12 ORF75111 - 0.089 13.0 0.3 14 6.0 0.0 2.4 2 0 0 2 2 2 0 Proteins of 100 residues with WXG Leu_zip PF15294.6 ORF75111 - 0.16 11.5 2.7 0.17 11.4 2.1 1.3 1 1 0 1 1 1 0 Leucine zipper SlyX PF04102.12 ORF75111 - 0.18 12.5 3.5 12 6.6 0.0 3.4 3 1 1 4 4 3 0 SlyX NPV_P10 PF05531.12 ORF75111 - 0.56 10.7 2.3 5.8 7.5 0.6 2.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein COG2 PF06148.11 ORF75111 - 0.99 9.5 4.0 9.8 6.3 0.8 2.7 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4164 PF13747.6 ORF75111 - 5.2 7.4 11.4 6.4 7.1 0.8 3.1 1 1 1 3 3 3 0 Domain of unknown function (DUF4164) Use1 PF09753.9 ORF73190 - 6.6e-15 55.5 9.8 7.8e-15 55.3 9.8 1.1 1 0 0 1 1 1 1 Membrane fusion protein Use1 zf-CRD PF17979.1 ORF73190 - 0.048 13.8 1.2 0.065 13.3 0.4 1.5 1 1 1 2 2 2 0 Cysteine rich domain with multizinc binding regions DUF853 PF05872.12 ORF73190 - 0.28 9.7 3.8 0.35 9.4 3.8 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) 60KD_IMP PF02096.20 ORF73190 - 1.2 9.0 5.2 0.092 12.6 0.4 1.6 2 0 0 2 2 2 0 60Kd inner membrane protein DUF2207 PF09972.9 ORF73190 - 3.7 6.2 7.7 6.4 5.4 7.3 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) adh_short PF00106.25 ORF72901 - 2.2e-07 30.5 0.0 3.9e-06 26.5 0.0 2.1 1 1 0 1 1 1 1 short chain dehydrogenase MIP PF00230.20 ORF72532 - 2.5e-13 50.3 0.6 2.8e-13 50.1 0.6 1.0 1 0 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF72532 - 0.029 13.8 0.2 0.089 12.2 0.2 1.9 1 0 0 1 1 1 0 Transmembrane alpha-helix domain SnoaL PF07366.12 ORF724 - 1.8e-12 47.1 0.1 4.1e-12 46.0 0.0 1.7 2 0 0 2 2 2 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 ORF724 - 3.4e-09 37.3 0.2 6.4e-09 36.4 0.1 1.5 1 1 0 1 1 1 1 SnoaL-like domain cNMP_binding PF00027.29 ORF67934 - 0.0001 22.3 0.1 0.00021 21.3 0.1 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain EF-hand_6 PF13405.6 ORF67610 - 1.6e-06 27.5 0.1 0.027 14.4 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF67610 - 0.00036 19.9 0.0 0.56 9.9 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF67610 - 0.0055 17.1 0.1 0.15 12.5 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF67610 - 0.061 12.8 0.1 4.5 6.9 0.0 2.3 2 0 0 2 2 2 0 EF hand EF-hand_8 PF13833.6 ORF67610 - 0.17 11.7 0.2 2.4 8.1 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain pair GST_C_3 PF14497.6 ORF66875 - 1.9e-14 53.7 0.4 3.3e-14 52.9 0.4 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF66875 - 4.6e-12 46.1 0.1 9.4e-12 45.1 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF66875 - 2e-06 27.9 0.1 3.2e-06 27.3 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF66875 - 3.9e-05 24.0 0.1 0.00015 22.1 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF66875 - 0.0027 17.7 0.0 0.0049 16.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF66875 - 0.02 15.2 0.0 0.05 13.9 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain UPF0556 PF10572.9 ORF66875 - 0.1 12.1 0.1 0.16 11.4 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0556 Defensin_propep PF00879.18 ORF62756 - 0.035 14.4 0.5 0.073 13.4 0.1 1.7 2 0 0 2 2 2 0 Defensin propeptide RRM_1 PF00076.22 ORF6239 - 4.6e-14 52.0 0.3 4.2e-06 26.5 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF6239 - 0.048 13.5 0.0 5.3 7.0 0.0 2.4 2 1 0 2 2 2 0 Occluded RNA-recognition motif CagA PF03507.13 ORF6239 - 0.056 13.4 0.1 0.086 12.8 0.1 1.2 1 0 0 1 1 1 0 CagA exotoxin MIP PF00230.20 ORF62046 - 2.5e-13 50.3 0.6 2.8e-13 50.1 0.6 1.0 1 0 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF62046 - 0.029 13.8 0.2 0.089 12.2 0.2 1.9 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Lactamase_B_2 PF12706.7 ORF60694 - 0.035 13.6 0.0 0.052 13.1 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain APG6 PF04111.12 ORF60090 - 0.0055 16.7 0.2 0.0095 15.9 0.2 1.4 1 0 0 1 1 1 1 Apg6 BARA domain RRM_1 PF00076.22 ORF589 - 6.7e-22 77.1 1.0 2.4e-11 43.3 0.0 2.5 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF589 - 5.8e-06 26.1 0.1 0.00035 20.4 0.0 2.5 2 0 0 2 2 2 1 Occluded RNA-recognition motif RRM_5 PF13893.6 ORF589 - 6.9e-05 22.4 3.1 0.0005 19.7 1.2 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Calcipressin PF04847.12 ORF589 - 0.0077 16.0 2.0 0.15 11.8 0.2 2.5 2 1 0 2 2 2 1 Calcipressin AAA_11 PF13086.6 ORF589 - 0.012 15.4 2.7 0.014 15.2 2.7 1.1 1 0 0 1 1 1 0 AAA domain UPF0242 PF06785.11 ORF589 - 0.014 15.5 7.0 0.019 15.1 7.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HMA PF00403.26 ORF589 - 0.017 15.6 0.1 0.086 13.3 0.0 2.1 2 0 0 2 2 2 0 Heavy-metal-associated domain SKA2 PF16740.5 ORF589 - 0.035 13.9 5.9 0.031 14.0 4.3 1.7 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Img2 PF05046.14 ORF589 - 0.049 13.9 0.1 0.11 12.8 0.1 1.8 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Limkain-b1 PF11608.8 ORF589 - 0.088 12.9 1.3 1.1 9.4 0.1 2.9 2 1 1 3 3 3 0 Limkain b1 Seryl_tRNA_N PF02403.22 ORF589 - 0.094 13.0 7.6 0.17 12.1 7.6 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF4522 PF15022.6 ORF589 - 0.22 11.8 3.1 0.33 11.2 2.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4522) CCDC-167 PF15188.6 ORF589 - 0.24 11.8 5.8 0.47 10.8 5.8 1.5 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 LMBR1 PF04791.16 ORF589 - 0.37 9.6 2.1 0.39 9.6 2.1 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein MRP-S26 PF14943.6 ORF589 - 0.56 10.1 13.0 0.83 9.5 13.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 FliD_N PF02465.18 ORF589 - 0.77 10.5 3.9 0.52 11.0 1.0 2.0 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Glyco_hydro_36N PF16875.5 ORF57692 - 0.024 14.2 0.1 0.035 13.7 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 36 N-terminal domain Chromate_transp PF02417.15 ORF56745 - 1.6e-25 90.1 15.8 1.6e-25 90.1 15.8 1.3 2 0 0 2 2 2 1 Chromate transporter Halogen_Hydrol PF10112.9 ORF5639 - 0.03 14.4 1.9 0.068 13.2 1.9 1.5 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PilN PF05137.13 ORF5639 - 0.06 13.5 0.3 0.12 12.5 0.1 1.7 2 0 0 2 2 2 0 Fimbrial assembly protein (PilN) CHD5 PF04420.14 ORF5639 - 0.89 9.4 6.8 0.38 10.6 2.7 2.1 1 1 1 2 2 2 0 CHD5-like protein Mob1_phocein PF03637.17 ORF54923 - 2.9e-31 108.8 2.4 3.9e-31 108.4 2.4 1.1 1 0 0 1 1 1 1 Mob1/phocein family FMN_red PF03358.15 ORF54763 - 4.6e-15 55.7 0.0 6.2e-15 55.3 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase MIP PF00230.20 ORF53849 - 1.4e-11 44.6 1.0 1.6e-11 44.4 1.0 1.0 1 0 0 1 1 1 1 Major intrinsic protein Topoisom_bac PF01131.20 ORF53426 - 7.2e-10 38.4 4.2 4.1e-09 35.9 0.0 2.0 2 0 0 2 2 2 2 DNA topoisomerase DUF4798 PF16055.5 ORF53426 - 0.11 12.8 4.0 0.14 12.4 2.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4798) DUF1631 PF07793.11 ORF53426 - 0.98 7.8 3.0 6 5.2 3.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1631) FKBP_C PF00254.28 ORF51931 - 2.2e-07 31.1 0.0 3.3e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase HA PF03457.14 ORF51827 - 2.6e-22 78.9 5.9 2.2e-11 43.9 0.3 2.2 2 0 0 2 2 2 2 Helicase associated domain Topoisom_bac PF01131.20 ORF50219 - 7.2e-10 38.4 4.2 4.1e-09 35.9 0.0 2.0 2 0 0 2 2 2 2 DNA topoisomerase DUF4798 PF16055.5 ORF50219 - 0.11 12.8 4.0 0.14 12.4 2.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4798) DUF1631 PF07793.11 ORF50219 - 0.98 7.8 3.0 6 5.2 3.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1631) ILEI PF15711.5 ORF49723 - 2.4e-11 43.9 0.0 3.4e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 Interleukin-like EMT inducer TonB_2 PF13103.6 ORF49723 - 0.0023 18.1 0.0 0.0098 16.1 0.0 2.1 2 0 0 2 2 2 1 TonB C terminal FAP PF07174.11 ORF49723 - 1.3 8.5 18.1 1.9 7.9 18.1 1.2 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Na_Ca_ex_C PF16494.5 ORF48283 - 1.1 9.7 6.6 1.1 9.7 2.7 2.2 2 0 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain GST_N PF02798.20 ORF48206 - 3.4e-13 49.7 0.0 5.6e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF48206 - 1.3e-12 47.9 0.0 2.3e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF48206 - 7.2e-12 45.4 0.0 3.7e-11 43.1 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF48206 - 9.5e-10 38.4 0.3 1.9e-09 37.4 0.3 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF48206 - 1.1e-09 38.4 0.0 2e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_5 PF16865.5 ORF48206 - 0.00058 20.4 0.0 0.00087 19.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF48206 - 0.0016 18.6 0.0 0.0035 17.5 0.0 1.5 1 1 1 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF48206 - 0.026 15.2 0.0 0.046 14.5 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain DUF4064 PF13273.6 ORF47853 - 0.0037 17.5 4.5 1.3 9.3 0.1 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF4064) PBP1_TM PF14812.6 ORF47853 - 0.025 14.9 0.0 0.048 14.0 0.0 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Orf78 PF06024.12 ORF47853 - 0.24 11.7 2.8 0.26 11.6 1.1 2.0 1 1 0 1 1 1 0 Orf78 (ac78) DUF4611 PF15387.6 ORF47853 - 0.29 11.4 4.7 0.37 11.0 2.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4611) YMF19 PF02326.15 ORF47853 - 0.81 10.5 4.9 12 6.8 0.1 2.6 2 1 0 2 2 2 0 Plant ATP synthase F0 DUF5082 PF16888.5 ORF47285 - 0.016 15.4 3.0 0.12 12.6 2.6 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Cyc-maltodext_C PF10438.9 ORF47285 - 0.024 14.7 0.2 0.051 13.7 0.2 1.5 1 0 0 1 1 1 0 Cyclo-malto-dextrinase C-terminal domain Spot_14 PF07084.12 ORF47285 - 0.046 13.9 3.9 0.14 12.3 3.9 1.8 1 1 0 1 1 1 0 Thyroid hormone-inducible hepatic protein Spot 14 TFIIA_gamma_N PF02268.16 ORF47285 - 0.064 13.3 0.1 0.83 9.7 0.0 2.4 2 0 0 2 2 2 0 Transcription initiation factor IIA, gamma subunit, helical domain DUF4795 PF16043.5 ORF47285 - 0.064 12.8 12.5 0.34 10.5 12.5 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) ApoLp-III PF07464.11 ORF47285 - 0.15 12.1 7.1 2.2 8.4 1.9 2.2 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) PPR_2 PF13041.6 ORF46851 - 2.7e-20 72.3 0.0 4.8e-09 36.3 0.0 3.9 1 1 4 5 5 5 5 PPR repeat family PPR PF01535.20 ORF46851 - 4.4e-19 67.3 0.0 0.00015 21.8 0.1 4.6 4 0 0 4 4 4 4 PPR repeat PPR_1 PF12854.7 ORF46851 - 5.8e-11 41.9 0.0 0.02 14.6 0.0 4.8 5 0 0 5 5 5 3 PPR repeat PPR_3 PF13812.6 ORF46851 - 1.5e-10 41.0 0.0 7.2e-06 26.0 0.0 3.3 2 1 0 3 3 3 2 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF46851 - 0.00012 21.5 0.0 0.0018 17.7 0.0 2.0 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP TPR_7 PF13176.6 ORF46851 - 0.0011 18.9 0.1 18 5.6 0.0 4.8 3 1 2 5 5 5 1 Tetratricopeptide repeat Mannosyl_trans4 PF15971.5 ORF46851 - 0.52 10.1 2.6 1.5 8.7 0.6 2.2 2 0 0 2 2 2 0 DolP-mannose mannosyltransferase LysR_substrate PF03466.20 ORF45805 - 1.1e-14 54.3 0.0 3.8e-14 52.5 0.0 1.7 1 1 0 1 1 1 1 LysR substrate binding domain LytB_WW PF18342.1 ORF44485 - 0.087 13.0 0.0 0.18 12.0 0.0 1.5 1 0 0 1 1 1 0 Endo-beta-N-acetylglucosaminidase LytB WW domain Helicase_C PF00271.31 ORF41966 - 8.5e-29 100.1 0.0 1.4e-28 99.5 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Sec1 PF00995.23 ORF41796 - 0.00059 19.2 2.8 0.0007 19.0 2.8 1.1 1 0 0 1 1 1 1 Sec1 family FAD_binding_1 PF00667.20 ORF4104 - 2.9e-17 63.0 0.0 4.4e-16 59.1 0.0 2.1 1 1 0 1 1 1 1 FAD binding domain Flavodoxin_1 PF00258.25 ORF4104 - 0.011 16.0 0.1 0.02 15.1 0.1 1.5 1 0 0 1 1 1 0 Flavodoxin Neugrin PF06413.11 ORF4104 - 0.06 13.4 0.2 0.094 12.7 0.2 1.3 1 0 0 1 1 1 0 Neugrin Adap_comp_sub PF00928.21 ORF40815 - 3.5e-62 210.2 0.0 4.1e-62 210.0 0.0 1.0 1 0 0 1 1 1 1 Adaptor complexes medium subunit family muHD PF10291.9 ORF40815 - 0.00081 18.9 0.0 0.00098 18.6 0.0 1.1 1 0 0 1 1 1 1 Muniscin C-terminal mu homology domain GST_C_3 PF14497.6 ORF39225 - 2.9e-13 49.8 0.3 4.5e-13 49.2 0.3 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF39225 - 1.8e-08 34.6 0.0 3.4e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF39225 - 1.9e-07 31.2 0.1 3.2e-07 30.5 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF39225 - 0.0041 17.1 0.0 0.0077 16.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Proteasome PF00227.26 ORF37962 - 7.4e-43 146.3 0.2 8.4e-43 146.1 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit DUF2459 PF09601.10 ORF37413 - 3.4e-46 157.2 0.0 3.9e-46 157.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2459) SUKH-4 PF14435.6 ORF36899 - 0.031 14.4 0.2 0.04 14.0 0.2 1.2 1 0 0 1 1 1 0 SUKH-4 immunity protein DUF5507 PF17612.2 ORF36602 - 0.08 12.7 0.6 0.11 12.3 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5507) FAD_binding_1 PF00667.20 ORF36461 - 2.9e-17 63.0 0.0 4.4e-16 59.1 0.0 2.1 1 1 0 1 1 1 1 FAD binding domain Flavodoxin_1 PF00258.25 ORF36461 - 0.011 16.0 0.1 0.02 15.1 0.1 1.5 1 0 0 1 1 1 0 Flavodoxin Neugrin PF06413.11 ORF36461 - 0.06 13.4 0.2 0.094 12.7 0.2 1.3 1 0 0 1 1 1 0 Neugrin DUF1615 PF07759.12 ORF36114 - 5.1e-99 331.5 0.0 5.6e-99 331.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1615) DUF1065 PF06358.11 ORF32625 - 0.14 12.1 0.1 0.26 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1065) Suf PF05843.14 ORF30954 - 0.019 15.0 5.9 0.023 14.7 5.9 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) DUF3364 PF11844.8 ORF30954 - 0.76 10.1 6.1 1.8 8.8 1.4 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3364) Myotub-related PF06602.14 ORF30182 - 3.1e-42 144.8 4.4 4.1e-42 144.4 4.4 1.2 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain Shadoo PF14999.6 ORF28585 - 0.00014 21.9 6.5 0.00025 21.2 6.5 1.4 1 0 0 1 1 1 1 Shadow of prion protein, neuroprotective RCC1_2 PF13540.6 ORF28467 - 1.2e-09 37.7 4.8 0.16 11.8 0.0 5.2 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat AFP_2 PF18815.1 ORF28467 - 1.1e-05 25.6 6.4 1.9 8.8 0.1 4.5 2 1 2 4 4 4 3 Bacterial antifreeze protein repeat Crystall PF00030.19 ORF28467 - 1.6e-05 25.0 0.0 0.18 12.0 0.0 3.2 3 0 0 3 3 3 2 Beta/Gamma crystallin DUF155 PF02582.14 ORF28467 - 0.00078 19.6 1.7 5 7.2 0.0 4.1 1 1 1 2 2 2 1 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 ORF28467 - 0.0011 19.4 0.0 36 4.9 0.0 4.0 4 0 0 4 4 4 0 Spectrin repeat Methyltransf_29 PF03141.16 ORF28467 - 0.061 11.9 0.5 20 3.5 0.0 3.6 4 0 0 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase SSrecog PF03531.14 ORF28467 - 0.12 12.3 0.3 45 4.1 0.0 3.3 4 0 0 4 4 4 0 Structure-specific recognition protein (SSRP1) Glyco_hydro_88 PF07470.13 ORF28467 - 0.21 10.6 1.9 9.8 5.1 0.0 3.6 3 1 1 4 4 4 0 Glycosyl Hydrolase Family 88 DDE_Tnp_1_3 PF13612.6 ORF28467 - 0.22 11.5 1.3 1.4e+02 2.4 0.0 3.7 4 0 0 4 4 4 0 Transposase DDE domain Apo-CIII PF05778.12 ORF28467 - 2.2 8.0 8.4 27 4.5 0.1 3.9 4 0 0 4 4 4 0 Apolipoprotein CIII (Apo-CIII) DUF229 PF02995.17 ORF27417 - 1.2e-16 60.5 3.6 1.7e-16 60.0 3.6 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF27417 - 4.4e-06 26.3 0.3 5.9e-06 25.9 0.3 1.3 1 1 0 1 1 1 1 Sulfatase Coq4 PF05019.13 ORF26101 - 4.1e-75 251.9 0.0 4.5e-75 251.8 0.0 1.0 1 0 0 1 1 1 1 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 GlcNAc-1_reg PF18440.1 ORF25965 - 0.04 14.1 1.8 0.7 10.2 0.5 2.5 2 0 0 2 2 2 0 Putative GlcNAc-1 phosphotransferase regulatory domain Cys_rich_KTR PF14205.6 ORF25965 - 0.092 12.6 0.8 0.18 11.6 0.8 1.5 1 0 0 1 1 1 0 Cysteine-rich KTR MS_channel PF00924.18 ORF25965 - 0.17 11.4 0.6 0.21 11.1 0.6 1.2 1 0 0 1 1 1 0 Mechanosensitive ion channel zf-C5HC2 PF02928.16 ORF25965 - 1.6 9.2 5.8 0.37 11.2 2.5 1.7 2 0 0 2 2 2 0 C5HC2 zinc finger UPRTase PF14681.6 ORF24749 - 6.9e-65 218.4 0.0 7.8e-65 218.2 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 ORF24749 - 1.2e-12 47.7 0.3 2e-12 46.9 0.3 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 ORF24749 - 0.035 14.2 0.1 0.059 13.4 0.1 1.4 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain DUF3263 PF11662.8 ORF24749 - 0.19 11.6 0.1 0.37 10.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3263) Na_H_antiporter PF03553.14 ORF24292 - 1.2e-26 93.6 10.1 1.9e-26 93.0 10.1 1.2 1 0 0 1 1 1 1 Na+/H+ antiporter family Wzy_C PF04932.15 ORF24292 - 1.4 8.5 6.3 0.72 9.5 0.2 2.1 2 0 0 2 2 2 0 O-Antigen ligase 7TMR-DISM_7TM PF07695.11 ORF24292 - 5.3 6.9 15.3 99 2.7 15.4 2.1 1 1 0 1 1 1 0 7TM diverse intracellular signalling Secretin_N_2 PF07655.13 ORF20842 - 0.43 11.2 7.0 3.5 8.2 1.3 3.0 3 0 0 3 3 3 0 Secretin N-terminal domain EF-hand_7 PF13499.6 ORF20517 - 0.004 17.6 0.1 0.0096 16.4 0.1 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF20517 - 0.0075 16.1 0.5 0.24 11.3 0.0 2.3 2 0 0 2 2 2 1 EF-hand domain pair FKS1_dom1 PF14288.6 ORF20441 - 0.012 16.0 3.1 0.02 15.3 2.8 1.5 1 1 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 Ribosomal_L19e PF01280.20 ORF20340 - 1.6e-55 187.1 13.4 1.6e-55 187.1 13.4 2.2 2 0 0 2 2 2 1 Ribosomal protein L19e UNC-79 PF14776.6 ORF20340 - 0.25 10.1 2.0 0.32 9.7 2.0 1.1 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 EamA PF00892.20 ORF19465 - 1.6e-18 67.2 19.4 2.4e-10 40.7 13.7 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF2614 PF11023.8 ORF19465 - 0.34 11.0 0.1 0.34 11.0 0.1 2.4 2 0 0 2 2 2 0 Zinc-ribbon containing domain DUF2157 PF09925.9 ORF19465 - 0.37 10.6 8.3 0.62 9.8 0.5 2.5 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) DUF202 PF02656.15 ORF19465 - 7.3 7.1 6.7 0.75 10.3 0.8 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF202) PseudoU_synth_2 PF00849.22 ORF1761 - 6.6e-18 65.3 0.0 9.3e-18 64.8 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase Secretin_N_2 PF07655.13 ORF17317 - 0.43 11.2 7.0 3.5 8.2 1.3 3.0 3 0 0 3 3 3 0 Secretin N-terminal domain NAD_kinase PF01513.21 ORF1685 - 3.6e-28 98.6 0.0 2.4e-27 95.9 0.0 1.9 1 1 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 ORF1685 - 0.0021 17.6 0.0 0.0044 16.6 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain ApoLp-III PF07464.11 ORF1425 - 0.012 15.8 0.1 0.016 15.3 0.1 1.2 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) FlxA PF14282.6 ORF1425 - 0.013 15.5 0.1 0.029 14.3 0.1 1.6 1 1 0 1 1 1 0 FlxA-like protein DUF4404 PF14357.6 ORF1425 - 0.018 15.7 2.2 0.048 14.3 0.3 2.6 2 2 0 2 2 2 0 Domain of unknown function (DUF4404) Filament PF00038.21 ORF1425 - 0.018 14.6 0.5 0.018 14.6 0.5 2.0 2 1 0 2 2 2 0 Intermediate filament protein LXG PF04740.12 ORF1425 - 0.033 13.9 0.3 0.085 12.6 0.2 1.7 1 1 1 2 2 2 0 LXG domain of WXG superfamily HMMR_N PF15905.5 ORF1425 - 0.035 13.6 0.3 0.06 12.8 0.3 1.4 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Fib_alpha PF08702.10 ORF1425 - 0.076 13.2 0.6 0.13 12.4 0.6 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF724 PF05266.14 ORF1425 - 0.078 12.8 0.6 0.12 12.2 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Baculo_PEP_C PF04513.12 ORF1425 - 0.081 13.0 0.4 0.36 10.9 0.4 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus EzrA PF06160.12 ORF1425 - 0.085 11.0 0.9 0.1 10.8 0.9 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA WXG100 PF06013.12 ORF1425 - 0.089 13.0 0.3 14 6.0 0.0 2.4 2 0 0 2 2 2 0 Proteins of 100 residues with WXG Leu_zip PF15294.6 ORF1425 - 0.16 11.5 2.7 0.17 11.4 2.1 1.3 1 1 0 1 1 1 0 Leucine zipper SlyX PF04102.12 ORF1425 - 0.18 12.5 3.5 12 6.6 0.0 3.4 3 1 1 4 4 3 0 SlyX NPV_P10 PF05531.12 ORF1425 - 0.56 10.7 2.3 5.8 7.5 0.6 2.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein COG2 PF06148.11 ORF1425 - 0.99 9.5 4.0 9.8 6.3 0.8 2.7 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4164 PF13747.6 ORF1425 - 5.2 7.4 11.4 6.4 7.1 0.8 3.1 1 1 1 3 3 3 0 Domain of unknown function (DUF4164) VASP_tetra PF08776.11 ORF13896 - 0.0045 16.5 0.7 0.02 14.5 0.2 2.3 2 0 0 2 2 2 1 VASP tetramerisation domain KLRAQ PF10205.9 ORF13896 - 5.4 7.3 13.5 2.1 8.6 9.5 2.0 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein 2-Hacid_dh_C PF02826.19 ORF13698 - 1.6e-44 151.4 0.0 3.3e-44 150.4 0.0 1.5 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 ORF13698 - 1e-06 28.4 0.0 1.5e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain AdoHcyase_NAD PF00670.21 ORF13698 - 2e-05 24.7 0.0 3e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ThiF PF00899.21 ORF13698 - 0.0013 18.1 0.0 0.0023 17.3 0.0 1.3 1 0 0 1 1 1 1 ThiF family NAD_binding_2 PF03446.15 ORF13698 - 0.0027 17.9 0.0 0.004 17.3 0.0 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 ORF13698 - 0.0052 16.1 0.0 0.0063 15.8 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 ORF13698 - 0.008 16.7 0.0 0.013 16.0 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF13698 - 0.013 14.7 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ELFV_dehydrog PF00208.21 ORF13698 - 0.02 14.6 0.0 0.032 13.9 0.0 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TrkA_N PF02254.18 ORF13698 - 0.025 14.8 0.0 0.042 14.1 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Shikimate_DH PF01488.20 ORF13698 - 0.041 14.0 0.0 0.066 13.3 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase XdhC_C PF13478.6 ORF13698 - 0.063 13.8 0.0 0.083 13.4 0.0 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain F420_oxidored PF03807.17 ORF13698 - 0.08 13.5 0.0 0.17 12.5 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 ORF13698 - 0.083 13.3 0.0 0.12 12.8 0.0 1.6 1 1 0 1 1 1 0 Putative NAD(P)-binding Oxidored_nitro PF00148.19 ORF13698 - 0.12 11.1 0.0 0.15 10.7 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Pro_isomerase PF00160.21 ORF13347 - 2.1e-26 93.1 0.1 2.6e-26 92.8 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ARS2 PF04959.13 ORF12713 - 7.7e-13 49.3 8.1 8.9e-13 49.0 7.6 1.4 1 1 0 1 1 1 1 Arsenite-resistance protein 2 zf-C2H2 PF00096.26 ORF12713 - 0.014 15.8 1.4 0.014 15.8 1.4 1.8 2 0 0 2 2 2 0 Zinc finger, C2H2 type NOC3p PF07540.11 ORF12713 - 0.062 13.8 0.4 0.14 12.7 0.4 1.5 1 0 0 1 1 1 0 Nucleolar complex-associated protein zf-C2H2_4 PF13894.6 ORF12713 - 0.22 12.5 1.4 0.56 11.2 1.4 1.7 1 0 0 1 1 1 0 C2H2-type zinc finger FKS1_dom1 PF14288.6 ORF12713 - 3.2 8.1 8.5 4.1 7.8 5.1 2.4 1 1 1 2 2 2 0 1,3-beta-glucan synthase subunit FKS1, domain-1 Abhydrolase_1 PF00561.20 ORF11456 - 2.1e-13 50.5 0.0 1.6e-09 37.8 0.0 2.3 1 1 1 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF11456 - 3e-13 49.6 0.0 3.2e-08 33.2 0.1 2.9 2 1 1 3 3 3 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF11456 - 1.4e-08 35.6 2.6 4.3e-08 34.0 2.6 1.6 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 ORF11456 - 4.9e-05 23.2 0.0 6.3e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 ORF11456 - 0.0012 18.4 0.0 0.052 13.1 0.0 2.0 1 1 0 1 1 1 1 Dienelactone hydrolase family Ndr PF03096.14 ORF11456 - 0.0048 15.6 0.0 0.0092 14.7 0.0 1.4 2 0 0 2 2 2 1 Ndr family Abhydrolase_3 PF07859.13 ORF11456 - 0.011 15.6 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Esterase PF00756.20 ORF11456 - 0.018 14.7 0.1 0.23 11.1 0.0 2.0 1 1 0 1 1 1 0 Putative esterase BAAT_C PF08840.11 ORF11456 - 0.16 11.8 0.0 0.85 9.5 0.0 1.8 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal UPF0227 PF05728.12 ORF11456 - 0.19 11.7 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Peptidase_S28 PF05577.12 ORF11456 - 0.19 10.5 0.0 0.26 10.1 0.0 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 PAF-AH_p_II PF03403.13 ORF11456 - 0.23 9.9 0.0 7.4 5.0 0.0 2.0 2 0 0 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II PEP-utilizers_C PF02896.18 ORF110758 - 1.5e-08 34.1 0.0 6e-07 28.9 0.0 2.1 1 1 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain Glycos_transf_1 PF00534.20 ORF110758 - 0.14 11.7 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 zf-TRAF PF02176.18 ORF109700 - 5.6e-10 39.8 18.8 1.9e-08 34.9 6.4 2.4 1 1 1 2 2 2 2 TRAF-type zinc finger zf-TRAF_2 PF15965.5 ORF109700 - 5.9e-08 33.1 8.2 5.9e-08 33.1 8.2 2.2 1 1 1 2 2 2 1 TRAF-like zinc-finger FAM184 PF15665.5 ORF109700 - 0.00062 19.6 2.5 0.001 18.9 2.5 1.3 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B Sina PF03145.16 ORF109700 - 0.0036 17.3 19.9 0.0042 17.0 2.5 2.9 1 1 1 2 2 2 1 Seven in absentia protein family Uso1_p115_C PF04871.13 ORF109700 - 0.0079 16.6 3.6 0.014 15.7 3.6 1.4 1 0 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, C terminal region DUF1579 PF07617.11 ORF109700 - 0.064 13.2 0.7 0.095 12.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1579) Snf7 PF03357.21 ORF10947 - 1.7e-29 102.6 17.4 2.2e-29 102.2 17.2 1.2 1 1 0 1 1 1 1 Snf7 Trans_reg_C PF00486.28 ORF10947 - 0.087 12.9 3.5 3.8 7.7 0.6 2.6 2 1 0 2 2 2 0 Transcriptional regulatory protein, C terminal HARE-HTH PF05066.13 ORF10947 - 0.2 12.1 1.8 0.62 10.5 0.2 2.5 2 1 1 3 3 3 0 HB1, ASXL, restriction endonuclease HTH domain DUF5082 PF16888.5 ORF10947 - 0.35 11.2 7.6 0.89 9.8 1.6 2.8 2 2 1 3 3 3 0 Domain of unknown function (DUF5082) Allexi_40kDa PF05549.11 ORF10947 - 1.1 8.7 5.9 2.3 7.7 2.0 2.0 1 1 1 2 2 2 0 Allexivirus 40kDa protein Spc24 PF08286.11 ORF10947 - 2.4 8.4 11.0 0.3 11.3 2.0 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF1664 PF07889.12 ORF10947 - 4 7.5 8.2 3 7.9 0.8 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Syntaxin_2 PF14523.6 ORF10947 - 4.8 7.6 7.3 8.1 6.9 4.5 2.2 1 1 0 2 2 2 0 Syntaxin-like protein DivIC PF04977.15 ORF10947 - 7.6 6.4 8.5 1.5 8.7 2.7 2.6 2 1 2 4 4 4 0 Septum formation initiator PDCD2_C PF04194.13 ORF106674 - 4e-32 111.7 0.4 5.6e-32 111.2 0.4 1.4 1 1 0 1 1 1 1 Programmed cell death protein 2, C-terminal putative domain Rhabdo_ncap PF00945.18 ORF106674 - 0.0075 15.2 0.1 0.0098 14.8 0.1 1.1 1 0 0 1 1 1 1 Rhabdovirus nucleocapsid protein DUF3295 PF11702.8 ORF106674 - 0.2 11.0 1.9 0.24 10.7 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) Ribosomal_S11 PF00411.19 ORF10640 - 2.3 8.6 5.7 4.4 7.8 0.0 3.2 1 1 2 3 3 3 0 Ribosomal protein S11 DUF229 PF02995.17 ORF104650 - 1.5e-09 37.0 2.1 4.3e-07 28.9 0.1 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF229) Ribosomal_L17 PF01196.19 ORF104650 - 0.019 15.8 0.1 0.068 14.1 0.2 1.8 1 1 1 2 2 2 0 Ribosomal protein L17 Prok-RING_4 PF14447.6 ORF103186 - 5.4e-05 23.0 7.4 5.4e-05 23.0 7.4 3.5 3 2 0 3 3 3 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF103186 - 7.5e-05 22.5 5.9 7.5e-05 22.5 5.9 4.6 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF103186 - 0.012 15.4 5.3 0.012 15.4 5.3 3.7 4 0 0 4 4 4 0 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 ORF103186 - 1.6 8.8 18.8 0.12 12.3 5.9 3.2 2 2 0 2 2 2 0 Transposase zinc-ribbon domain FKS1_dom1 PF14288.6 ORF10216 - 0.012 16.0 3.1 0.02 15.3 2.8 1.5 1 1 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 COQ7 PF03232.13 ORF102150 - 2.7e-12 46.8 0.1 3.3e-12 46.5 0.1 1.2 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 GST_N PF02798.20 ORF101744 - 2e-10 40.9 0.3 4.9e-10 39.6 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF101744 - 2.7e-10 40.3 0.2 4.9e-10 39.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF101744 - 7.4e-06 26.1 0.3 1.2e-05 25.4 0.3 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF101744 - 3.1e-05 23.9 0.0 7.8e-05 22.6 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF101744 - 9.3e-05 22.8 0.0 0.00048 20.5 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF101744 - 0.00045 20.5 0.0 0.0012 19.1 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain YhhN PF07947.14 ORF100368 - 1.1e-41 142.5 22.3 1.3e-41 142.2 22.3 1.1 1 0 0 1 1 1 1 YhhN family MIP PF00230.20 ORF100189 - 2.5e-13 50.3 0.6 2.8e-13 50.1 0.6 1.0 1 0 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF100189 - 0.029 13.8 0.2 0.089 12.2 0.2 1.9 1 0 0 1 1 1 0 Transmembrane alpha-helix domain HALZ PF02183.18 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 1.2e-06 28.6 21.1 6.9e-05 23.0 9.3 3.8 3 0 0 3 3 3 1 Homeobox associated leucine zipper CENP-F_leu_zip PF10473.9 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 8.5e-05 22.6 30.7 0.00022 21.2 15.8 2.5 1 1 1 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Macoilin PF09726.9 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.006 15.2 26.6 0.0072 15.0 26.6 1.0 1 0 0 1 1 1 1 Macoilin family DUF948 PF06103.11 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.0091 16.2 5.2 0.22 11.8 0.2 2.6 2 1 0 2 2 2 1 Bacterial protein of unknown function (DUF948) YabA PF06156.13 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.01 16.5 23.7 0.43 11.2 10.4 3.4 1 1 2 3 3 3 0 Initiation control protein YabA FAM184 PF15665.5 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.013 15.3 29.8 0.045 13.5 13.5 2.2 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B APG6_N PF17675.1 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.043 14.4 31.1 0.67 10.5 10.2 2.3 1 1 1 2 2 2 0 Apg6 coiled-coil region Mce4_CUP1 PF11887.8 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.15 11.5 1.1 0.21 11.0 0.1 1.8 2 1 0 2 2 2 0 Cholesterol uptake porter CUP1 of Mce4, putative DUF3450 PF11932.8 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.15 11.3 21.1 0.18 11.1 4.5 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) Fez1 PF06818.15 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.21 12.0 27.8 0.02 15.3 19.2 2.2 1 1 1 2 2 2 0 Fez1 FlaC_arch PF05377.11 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.24 11.8 17.7 0.29 11.6 3.4 3.7 4 2 1 5 5 4 0 Flagella accessory protein C (FlaC) DUF489 PF04356.12 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.4 10.7 14.1 0.035 14.1 6.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF489) LPP PF04728.13 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.45 10.9 10.5 3.4 8.1 0.1 4.0 2 2 0 3 3 3 0 Lipoprotein leucine-zipper DUF812 PF05667.11 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.47 9.3 30.1 0.69 8.7 30.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) TPR_MLP1_2 PF07926.12 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.6 10.2 28.7 2.5 8.2 2.5 3.1 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein SlyX PF04102.12 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.65 10.7 11.1 2 9.1 0.8 3.4 3 1 1 4 4 3 0 SlyX TEX13 PF15186.6 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.72 9.5 14.7 0.42 10.3 1.6 2.2 2 0 0 2 2 2 0 Testis-expressed sequence 13 protein family DUF1664 PF07889.12 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.74 9.9 18.2 0.15 12.1 2.1 2.9 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Jnk-SapK_ap_N PF09744.9 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 0.86 9.8 32.8 0.042 14.1 14.8 2.3 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 KASH_CCD PF14662.6 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 1.1 9.0 30.6 1.5 8.6 28.0 2.1 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH Prominin PF05478.11 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 1.3 6.9 21.4 0.087 10.8 10.8 2.0 1 1 0 2 2 2 0 Prominin Fungal_TACC PF12709.7 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 1.6 9.2 34.9 5.1 7.6 3.5 4.6 1 1 3 4 4 4 0 Fungal Transforming acidic coiled-coil (TACC) proteins TolA_bind_tri PF16331.5 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 1.7 8.8 18.8 0.98 9.5 1.0 3.7 1 1 3 4 4 4 0 TolA binding protein trimerisation TSC22 PF01166.18 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 2.6 8.4 24.2 0.57 10.5 1.8 4.6 3 1 2 5 5 4 0 TSC-22/dip/bun family ApoO PF09769.9 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 3.1 7.8 6.1 1.7 8.6 0.5 2.7 1 1 1 3 3 3 0 Apolipoprotein O PI3K_P85_iSH2 PF16454.5 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 3.8 7.1 29.8 1.2 8.7 8.8 2.5 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Spc7 PF08317.11 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 4.4 6.1 29.8 2.4 7.0 4.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein GldM_N PF12081.8 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 4.4 7.3 22.9 70 3.4 22.8 2.1 1 1 0 1 1 1 0 GldM N-terminal domain HIP1_clath_bdg PF16515.5 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 8.8 7.0 25.2 0.18 12.4 5.1 3.3 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CtIP_N PF10482.9 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_1 - 9 6.4 24.9 6.9 6.7 16.4 2.7 1 1 1 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain WD40 PF00400.32 NODE_34909_length_619_cov_103.840753_g27935_i0reverse_frame_1 - 1.7e-20 72.9 8.3 6e-06 26.9 0.5 4.2 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_34909_length_619_cov_103.840753_g27935_i0reverse_frame_1 - 1.1e-05 25.7 2.5 0.045 14.0 0.1 3.2 1 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Omptin PF01278.20 NODE_34909_length_619_cov_103.840753_g27935_i0reverse_frame_1 - 0.044 12.8 0.4 0.44 9.5 0.0 2.0 2 0 0 2 2 2 0 Omptin family NUDIX PF00293.28 NODE_34893_length_619_cov_247.765411_g27919_i0reverse_frame_1 - 2.7e-10 40.4 0.0 4e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain DUF5100 PF17029.5 NODE_34885_length_619_cov_561.212329_g27911_i0forward_frame_1 - 0.052 13.4 0.0 1.7 8.5 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5100) ABC_tran PF00005.27 NODE_34870_length_620_cov_2.658120_g27902_i0reverse_frame_1 - 5.6e-07 30.1 0.4 1.2e-06 29.1 0.4 1.6 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_34870_length_620_cov_2.658120_g27902_i0reverse_frame_1 - 0.00027 20.6 0.2 0.0005 19.7 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_34870_length_620_cov_2.658120_g27902_i0reverse_frame_1 - 0.011 15.6 0.1 0.021 14.7 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase IstB_IS21 PF01695.17 NODE_34870_length_620_cov_2.658120_g27902_i0reverse_frame_1 - 0.035 13.8 0.0 0.078 12.7 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_25 PF13481.6 NODE_34870_length_620_cov_2.658120_g27902_i0reverse_frame_1 - 0.039 13.5 0.2 0.084 12.4 0.2 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 NODE_34870_length_620_cov_2.658120_g27902_i0reverse_frame_1 - 0.051 13.5 0.3 0.12 12.3 0.1 1.7 2 0 0 2 2 2 0 NACHT domain AAA_16 PF13191.6 NODE_34870_length_620_cov_2.658120_g27902_i0reverse_frame_1 - 0.053 13.9 0.5 0.053 13.9 0.5 1.9 2 1 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.6 NODE_34870_length_620_cov_2.658120_g27902_i0reverse_frame_1 - 0.11 12.8 1.1 0.16 12.2 0.2 1.7 2 0 0 2 2 2 0 AAA domain Zn_ribbon_17 PF17120.5 NODE_34839_length_620_cov_222.145299_g27872_i0forward_frame_1 - 0.0035 16.9 2.3 0.0059 16.2 1.5 1.9 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3H2C3 PF17122.5 NODE_34839_length_620_cov_222.145299_g27872_i0forward_frame_1 - 0.026 14.6 0.4 0.081 13.0 0.4 1.8 1 0 0 1 1 1 0 Zinc-finger DUF1181 PF06680.11 NODE_34839_length_620_cov_222.145299_g27872_i0forward_frame_1 - 0.21 11.4 5.7 0.53 10.1 5.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1181) Pyr_redox_2 PF07992.14 NODE_34826_length_620_cov_2299.446154_g27860_i0forward_frame_1 - 9.1e-09 34.9 0.0 2.7e-08 33.4 0.0 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_34826_length_620_cov_2299.446154_g27860_i0forward_frame_1 - 1.5e-07 31.9 0.0 2.4e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 NODE_34826_length_620_cov_2299.446154_g27860_i0forward_frame_1 - 0.15 11.2 0.3 2.5 7.3 0.0 2.1 2 0 0 2 2 2 0 Thi4 family ETRAMP PF09716.10 NODE_34820_length_621_cov_2.774744_g27855_i0reverse_frame_1 - 0.077 13.1 0.8 0.17 12.0 0.8 1.5 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) GAS PF13851.6 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.00083 18.8 1.9 0.0011 18.3 1.9 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding Filament PF00038.21 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.0013 18.3 3.9 0.0018 17.9 3.9 1.1 1 0 0 1 1 1 1 Intermediate filament protein TMF_DNA_bd PF12329.8 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.0034 17.4 2.9 0.0053 16.7 2.9 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding APG6_N PF17675.1 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.014 15.9 4.6 0.02 15.4 4.6 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region Seryl_tRNA_N PF02403.22 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.029 14.6 2.4 0.04 14.1 2.4 1.2 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF812 PF05667.11 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.034 13.0 2.3 0.043 12.7 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) FlxA PF14282.6 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.047 13.7 7.1 0.086 12.8 7.1 1.5 1 0 0 1 1 1 0 FlxA-like protein Spc7 PF08317.11 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.088 11.7 2.0 0.11 11.3 2.0 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Pox_A_type_inc PF04508.12 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.093 12.6 0.3 0.093 12.6 0.3 2.2 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat DUF3450 PF11932.8 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.1 11.9 6.8 0.14 11.5 6.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Snapin_Pallidin PF14712.6 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.13 12.7 4.7 0.22 12.0 4.7 1.3 1 0 0 1 1 1 0 Snapin/Pallidin COG6 PF06419.11 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.15 10.2 2.5 0.19 9.9 2.5 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 FAM76 PF16046.5 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.18 11.2 1.8 0.24 10.7 1.8 1.1 1 0 0 1 1 1 0 FAM76 protein DivIC PF04977.15 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.19 11.5 6.9 0.53 10.1 5.8 2.0 1 1 1 2 2 2 0 Septum formation initiator Takusan PF04822.13 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 0.27 11.1 3.9 0.27 11.1 1.4 2.0 1 1 1 2 2 2 0 Takusan DUF4404 PF14357.6 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 1 10.0 4.9 1.7 9.4 4.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) SlyX PF04102.12 NODE_34797_length_621_cov_180.648464_g27834_i0reverse_frame_1 - 7.5 7.3 8.0 33 5.2 8.0 2.2 1 1 0 1 1 1 0 SlyX Apocytochr_F_C PF01333.19 NODE_34778_length_621_cov_5337.315700_g27818_i0forward_frame_1 - 3.5e-35 120.6 0.1 4.8e-35 120.2 0.1 1.2 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF5006 PF16397.5 NODE_34778_length_621_cov_5337.315700_g27818_i0forward_frame_1 - 0.00041 19.6 0.1 0.00057 19.2 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5006) RnfC_N PF13375.6 NODE_34778_length_621_cov_5337.315700_g27818_i0forward_frame_1 - 0.096 12.7 0.3 3.5 7.7 0.1 2.3 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain TK PF00265.18 NODE_34774_length_622_cov_2.390119_g27816_i0forward_frame_2 - 7.2e-45 153.0 0.1 9.6e-45 152.6 0.1 1.1 1 0 0 1 1 1 1 Thymidine kinase AAA_22 PF13401.6 NODE_34774_length_622_cov_2.390119_g27816_i0forward_frame_2 - 0.027 14.7 0.0 0.048 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 NODE_34765_length_622_cov_4.965928_g27807_i0forward_frame_2 - 1.5e-05 25.6 0.0 2.6e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_34765_length_622_cov_4.965928_g27807_i0forward_frame_2 - 3.3e-05 23.8 0.0 5.3e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Cation_ATPase_C PF00689.21 NODE_34762_length_622_cov_27.935264_g27804_i0reverse_frame_3 - 2.3e-16 60.0 4.2 3e-16 59.7 4.2 1.1 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus DUF1980 PF09323.10 NODE_34762_length_622_cov_27.935264_g27804_i0reverse_frame_3 - 0.014 15.3 0.0 0.023 14.6 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) Ly49 PF08391.10 NODE_34762_length_622_cov_27.935264_g27804_i0reverse_frame_3 - 3.4 8.1 5.4 6.4 7.2 1.0 2.3 1 1 0 2 2 2 0 Ly49-like protein, N-terminal region Dynein_AAA_lid PF17852.1 NODE_34760_length_622_cov_68.413969_g27802_i0forward_frame_3 - 1e-10 41.8 1.0 6.7e-10 39.2 1.0 2.1 1 1 0 1 1 1 1 Dynein heavy chain AAA lid domain AsnC_trans_reg2 PF17805.1 NODE_34760_length_622_cov_68.413969_g27802_i0forward_frame_2 - 0.023 14.8 0.3 0.036 14.2 0.3 1.3 1 0 0 1 1 1 0 AsnC-like ligand binding domain IL7 PF01415.16 NODE_34742_length_622_cov_148.768313_g27785_i0forward_frame_3 - 0.058 13.4 0.6 0.092 12.8 0.6 1.3 1 0 0 1 1 1 0 Interleukin 7/9 family Peptidase_S28 PF05577.12 NODE_34738_length_622_cov_195.126065_g27781_i0forward_frame_2 - 5.4e-14 51.8 0.0 7.6e-14 51.3 0.0 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase S28 SOTI PF17079.5 NODE_34738_length_622_cov_195.126065_g27781_i0forward_frame_2 - 0.00057 20.3 0.2 1.1 9.7 0.0 2.4 2 0 0 2 2 2 2 Male-specific protein scotti Mur_ligase_M PF08245.12 NODE_34716_length_623_cov_3.741497_g27761_i0forward_frame_3 - 3.4e-11 43.5 0.0 4.6e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Con-6 PF10346.9 NODE_34705_length_623_cov_97.098639_g27750_i0reverse_frame_2 - 0.05 13.6 0.1 0.087 12.9 0.1 1.3 1 0 0 1 1 1 0 Conidiation protein 6 DUF755 PF05501.11 NODE_34693_length_623_cov_145.807823_g27740_i0reverse_frame_2 - 8.5 6.7 22.7 1.5 9.1 18.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF755) PGG PF13962.6 NODE_34693_length_623_cov_145.807823_g27740_i0forward_frame_2 - 3.9 7.3 5.8 2.4 8.0 0.9 2.5 2 1 0 2 2 2 0 Domain of unknown function HMA PF00403.26 NODE_34688_length_623_cov_162.108844_g27735_i0reverse_frame_3 - 0.001 19.5 0.1 0.0017 18.8 0.1 1.4 1 0 0 1 1 1 1 Heavy-metal-associated domain DUF3920 PF13058.6 NODE_34686_length_623_cov_184.593537_g27733_i0reverse_frame_2 - 0.048 13.9 0.7 0.1 12.8 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3920) Pox_A31 PF05771.11 NODE_34669_length_624_cov_2.938879_g27720_i0forward_frame_3 - 0.094 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A31 protein Tmpp129 PF10272.9 NODE_34669_length_624_cov_2.938879_g27720_i0forward_frame_3 - 0.12 11.7 0.1 0.15 11.3 0.1 1.1 1 0 0 1 1 1 0 Putative transmembrane protein precursor Presenilin PF01080.17 NODE_34664_length_624_cov_66.314092_g27716_i0reverse_frame_3 - 3.4 6.3 4.8 4 6.1 4.8 1.1 1 0 0 1 1 1 0 Presenilin DUF4337 PF14235.6 NODE_34664_length_624_cov_66.314092_g27716_i0reverse_frame_3 - 8 6.6 6.6 2.6 8.1 3.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) TolB_N PF04052.13 NODE_34659_length_624_cov_78.407470_g27711_i0reverse_frame_3 - 0.0019 18.3 0.1 0.0042 17.2 0.0 1.5 1 1 0 1 1 1 1 TolB amino-terminal domain RP-C_C PF11800.8 NODE_34659_length_624_cov_78.407470_g27711_i0reverse_frame_3 - 0.91 9.6 3.9 0.77 9.8 2.7 1.5 1 1 1 2 2 2 0 Replication protein C C-terminal region GST_C_3 PF14497.6 ORF98340 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF98340 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF98340 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF98340 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF98340 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain UXS1_N PF11803.8 ORF98166 - 0.061 13.7 1.0 0.11 12.9 0.1 1.8 2 0 0 2 2 2 0 UDP-glucuronate decarboxylase N-terminal DUF4252 PF14060.6 ORF98166 - 0.23 11.3 9.1 0.43 10.5 8.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4252) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks95.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks95.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks95.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks95.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EamA PF00892.20 ORF98156 - 6.9e-10 39.2 9.2 5.7e-08 33.0 7.0 2.1 2 0 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 ORF98156 - 1.5e-05 24.4 9.4 4.2e-05 22.9 5.4 2.0 1 1 1 2 2 2 2 Purine nucleobase transmembrane transport UAA PF08449.11 ORF98156 - 6.6e-05 22.3 4.9 8.9e-05 21.8 4.9 1.3 1 1 0 1 1 1 1 UAA transporter family TPT PF03151.16 ORF98156 - 0.00038 19.9 3.8 0.0013 18.1 0.9 2.0 2 0 0 2 2 2 1 Triose-phosphate Transporter family UPF0139 PF03669.13 ORF98156 - 3.8 7.4 5.9 16 5.5 0.3 3.1 2 2 1 3 3 3 0 Uncharacterised protein family (UPF0139) U-box PF04564.15 ORF95016 - 1.5e-11 44.2 0.1 3.2e-11 43.2 0.1 1.5 1 0 0 1 1 1 1 U-box domain Spc7 PF08317.11 ORF95016 - 0.0014 17.6 9.9 0.0031 16.5 9.9 1.5 1 1 0 1 1 1 1 Spc7 kinetochore protein ABC_tran_CTD PF16326.5 ORF95016 - 0.0016 18.6 4.6 0.76 10.1 0.3 2.4 2 0 0 2 2 2 2 ABC transporter C-terminal domain DUF3584 PF12128.8 ORF95016 - 0.0047 14.5 2.5 0.0062 14.1 2.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF5082 PF16888.5 ORF95016 - 0.0087 16.3 9.5 0.037 14.3 4.9 2.2 1 1 1 2 2 2 1 Domain of unknown function (DUF5082) DUF1664 PF07889.12 ORF95016 - 0.011 15.7 2.4 0.023 14.7 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Seryl_tRNA_N PF02403.22 ORF95016 - 0.018 15.2 8.3 0.21 11.8 5.2 2.3 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain ZapB PF06005.12 ORF95016 - 0.028 14.9 6.8 0.21 12.0 3.0 2.5 2 1 0 2 2 2 0 Cell division protein ZapB DUF2203 PF09969.9 ORF95016 - 0.031 15.0 4.0 1.7 9.3 0.1 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) FliJ PF02050.16 ORF95016 - 0.034 14.4 5.3 0.04 14.1 4.2 1.7 2 0 0 2 2 1 0 Flagellar FliJ protein APG6_N PF17675.1 ORF95016 - 0.035 14.6 9.1 0.059 13.9 9.1 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region Golgin_A5 PF09787.9 ORF95016 - 0.037 13.5 6.1 0.056 12.9 6.1 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF724 PF05266.14 ORF95016 - 0.04 13.7 5.1 0.084 12.7 4.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) zf-Nse PF11789.8 ORF95016 - 0.085 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit MutS_III PF05192.18 ORF95016 - 0.11 12.7 1.2 0.14 12.4 1.2 1.2 1 0 0 1 1 1 0 MutS domain III ER PF01133.17 ORF95016 - 0.12 12.4 2.1 0.29 11.2 0.4 2.1 1 1 1 2 2 2 0 Enhancer of rudimentary zf-NOSIP PF15906.5 ORF95016 - 0.13 12.4 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger of nitric oxide synthase-interacting protein YscO PF07321.12 ORF95016 - 0.16 11.9 3.6 0.34 10.9 3.6 1.5 1 1 0 1 1 1 0 Type III secretion protein YscO YgaB PF14182.6 ORF95016 - 0.29 11.6 5.8 0.23 11.9 2.1 2.6 1 1 1 2 2 2 0 YgaB-like protein DivIC PF04977.15 ORF95016 - 0.3 10.9 6.1 0.41 10.4 0.2 2.9 1 1 2 3 3 3 0 Septum formation initiator Prefoldin_2 PF01920.20 ORF95016 - 0.4 10.7 9.7 1.3 9.0 0.2 3.0 1 1 0 2 2 2 0 Prefoldin subunit KELK PF15796.5 ORF95016 - 0.5 10.9 9.8 4.6 7.8 3.5 2.9 2 1 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Fez1 PF06818.15 ORF95016 - 0.61 10.5 8.2 2.6 8.4 8.2 1.8 1 1 0 1 1 1 0 Fez1 Cep57_CLD_2 PF14197.6 ORF95016 - 0.91 9.7 7.2 4.4 7.5 0.9 2.8 1 1 0 2 2 2 0 Centrosome localisation domain of PPC89 BLOC1_2 PF10046.9 ORF95016 - 1 9.7 9.0 0.24 11.7 1.3 2.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Uso1_p115_C PF04871.13 ORF95016 - 1.1 9.6 7.9 1.9 8.8 7.2 1.7 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF4795 PF16043.5 ORF95016 - 1.3 8.6 9.6 1.7 8.2 5.8 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF4404 PF14357.6 ORF95016 - 1.3 9.7 5.1 1.6 9.4 0.5 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) DHR10 PF18595.1 ORF95016 - 1.4 9.0 8.5 6.9 6.8 0.9 2.3 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain FlaC_arch PF05377.11 ORF95016 - 3 8.3 7.4 2.1 8.8 0.2 3.6 2 1 2 4 4 4 0 Flagella accessory protein C (FlaC) ACCA PF03255.14 ORF95016 - 3.8 7.4 5.8 11 5.8 0.2 2.2 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CCDC-167 PF15188.6 ORF95016 - 4.1 7.8 8.9 79 3.7 8.9 2.9 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 TMPIT PF07851.13 ORF95016 - 4.5 6.4 7.4 13 4.9 7.0 1.7 1 1 0 1 1 1 0 TMPIT-like protein YabA PF06156.13 ORF95016 - 5 7.8 9.8 2.2e+02 2.6 7.2 2.7 2 1 0 2 2 1 0 Initiation control protein YabA ABC_tran PF00005.27 ORF9285 - 9.8e-30 103.9 0.1 1.3e-29 103.5 0.1 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF9285 - 2.4e-07 30.4 4.0 1.5e-05 24.5 0.5 2.2 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF9285 - 0.0034 17.4 0.3 0.01 15.9 0.1 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF9285 - 0.016 15.1 0.2 0.036 14.0 0.1 1.6 2 0 0 2 2 2 0 RsgA GTPase AAA_7 PF12775.7 ORF9285 - 0.025 14.1 0.1 0.2 11.2 0.0 2.1 2 0 0 2 2 2 0 P-loop containing dynein motor region FKBP_N_2 PF18023.1 ORF9285 - 0.041 14.0 0.2 0.067 13.3 0.2 1.3 1 0 0 1 1 1 0 BDBT FKBP like N-terminal Sigma54_activat PF00158.26 ORF9285 - 0.059 13.1 0.0 0.097 12.4 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_10 PF12846.7 ORF9285 - 0.059 12.3 0.1 0.067 12.1 0.1 1.4 1 1 0 1 1 1 0 AAA-like domain AAA_29 PF13555.6 ORF9285 - 0.073 12.8 0.1 0.15 11.8 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF9285 - 0.088 13.2 0.0 0.13 12.6 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 ORF9285 - 0.094 13.2 1.3 0.68 10.4 0.1 2.1 2 0 0 2 2 2 0 AAA domain CCT PF06203.14 ORF92642 - 1.4e-05 25.1 12.1 2.3e-05 24.3 12.1 1.4 1 0 0 1 1 1 1 CCT motif DUF4100 PF13352.6 ORF91704 - 0.012 15.4 0.1 0.017 14.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) ATP-synt_B PF00430.18 ORF9051 - 1.2e-08 35.1 18.9 1.1e-07 32.0 18.9 2.0 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) EI24 PF07264.11 ORF9051 - 0.0029 17.9 0.2 0.0037 17.5 0.2 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) V-ATPase_G PF03179.15 ORF9051 - 0.011 16.3 14.6 0.015 15.8 14.6 1.2 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF3054 PF11255.8 ORF9051 - 0.037 14.5 3.4 0.063 13.8 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3054) GST_C_2 PF13410.6 ORF89984 - 0.0091 16.0 0.1 0.017 15.1 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF89984 - 0.014 15.2 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF89984 - 0.021 15.6 0.0 0.035 14.8 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain FKBP_C PF00254.28 ORF89202 - 2.4e-18 66.3 0.0 8.2e-18 64.5 0.0 1.9 2 0 0 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase Mob1_phocein PF03637.17 ORF85825 - 0.17 11.9 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Mob1/phocein family AAA PF00004.29 ORF8402 - 2.2e-06 28.1 0.0 6.1e-06 26.7 0.0 1.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Yop-YscD_cpl PF16697.5 ORF8402 - 0.08 13.3 0.2 0.15 12.4 0.2 1.4 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain Nic96 PF04097.14 ORF81674 - 2.9e-12 45.9 0.0 3.8e-12 45.5 0.0 1.1 1 0 0 1 1 1 1 Nup93/Nic96 PPR PF01535.20 ORF81674 - 0.018 15.2 0.0 0.54 10.6 0.0 2.9 3 0 0 3 3 3 0 PPR repeat TPR_2 PF07719.17 ORF81674 - 0.023 14.8 0.1 0.8 10.0 0.1 2.9 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF81674 - 0.11 13.4 2.3 11 7.1 0.2 3.3 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF4427 PF14468.6 ORF78380 - 0.18 11.8 0.3 0.39 10.8 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4427) ATP-synt_B PF00430.18 ORF7800 - 1.2e-08 35.1 18.9 1.1e-07 32.0 18.9 2.0 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) EI24 PF07264.11 ORF7800 - 0.0029 17.9 0.2 0.0037 17.5 0.2 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) V-ATPase_G PF03179.15 ORF7800 - 0.011 16.3 14.6 0.015 15.8 14.6 1.2 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF3054 PF11255.8 ORF7800 - 0.037 14.5 3.4 0.063 13.8 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3054) Wtap PF17098.5 ORF76695 - 7.5e-17 61.7 14.9 7.5e-17 61.7 14.9 2.1 1 1 1 2 2 2 1 WTAP/Mum2p family KNOX2 PF03791.13 ORF76695 - 0.036 13.6 0.3 0.089 12.3 0.3 1.6 1 0 0 1 1 1 0 KNOX2 domain DUF2730 PF10805.8 ORF76695 - 2 8.5 7.0 3.2 7.9 1.0 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Spc7 PF08317.11 ORF76695 - 2.8 6.7 20.4 4.5 6.1 20.4 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF1043 PF06295.12 ORF76695 - 7.7 6.5 14.9 0.71 9.9 7.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) UPF0242 PF06785.11 ORF76695 - 8.7 6.4 16.9 15 5.6 16.9 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus V_ATPase_I PF01496.19 ORF76695 - 9.1 4.1 6.0 11 3.8 6.0 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family GST_C_3 PF14497.6 ORF76263 - 8.9e-16 57.9 0.9 1.3e-15 57.3 0.9 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF76263 - 3.1e-11 43.5 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF76263 - 2e-05 24.7 0.2 3.1e-05 24.1 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF76263 - 0.0065 15.8 0.0 0.0082 15.5 0.0 1.2 1 0 0 1 1 1 1 AIG1 family GST_C_2 PF13410.6 ORF76263 - 0.06 13.4 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF76263 - 0.088 13.2 0.0 0.21 12.0 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain 2OG-FeII_Oxy_3 PF13640.6 ORF7425 - 1.6e-12 48.1 0.1 2.5e-12 47.5 0.1 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF3024 PF11225.8 ORF7425 - 0.016 15.5 0.1 0.039 14.2 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3024) GST_C_3 PF14497.6 ORF71716 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF71716 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF71716 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF71716 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF71716 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain JmjC PF02373.22 ORF69731 - 1.4e-27 96.3 0.1 8.4e-27 93.9 0.0 2.0 2 0 0 2 2 2 1 JmjC domain, hydroxylase Stc1 PF12898.7 ORF69330 - 0.0037 17.8 4.8 0.31 11.6 0.0 3.9 3 2 0 3 3 3 1 Stc1 domain DUF2045 PF09741.9 ORF69330 - 0.21 11.0 1.7 36 3.6 0.1 3.0 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2045) Integrase_H2C2 PF17921.1 ORF69330 - 0.3 11.2 10.4 7.7 6.7 0.0 4.6 5 0 0 5 5 5 0 Integrase zinc binding domain OST3_OST6 PF04756.13 ORF69330 - 1.1 8.5 3.8 29 3.9 0.0 3.6 1 1 3 5 5 5 0 OST3 / OST6 family, transporter family Varsurf_PPLC PF03490.13 ORF69330 - 2.9 7.9 8.2 37 4.4 0.3 4.1 4 0 0 4 4 4 0 Variant-surface-glycoprotein phospholipase C EF-hand_6 PF13405.6 ORF68610 - 0.0078 16.1 0.5 0.088 12.8 0.0 2.6 3 0 0 3 3 3 1 EF-hand domain Phage_TAC_13 PF16459.5 ORF68610 - 0.014 15.9 0.2 4.2 7.9 0.0 2.4 2 1 0 2 2 2 0 Phage tail assembly chaperone, TAC LepB_N PF18640.1 ORF68610 - 0.041 13.5 0.2 0.061 12.9 0.2 1.4 1 0 0 1 1 1 0 LepB N-terminal domain DUF4218 PF13960.6 ORF68610 - 0.047 13.3 0.3 0.14 11.8 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4218) EF-hand_7 PF13499.6 ORF68610 - 0.065 13.7 0.9 0.34 11.4 0.8 2.1 1 1 0 1 1 1 0 EF-hand domain pair CPSF_A PF03178.15 ORF68499 - 2.9e-10 40.0 0.0 3.9e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 CPSF A subunit region Leu_Phe_trans PF03588.14 ORF68499 - 0.081 12.4 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Leucyl/phenylalanyl-tRNA protein transferase TTL PF03133.15 ORF67496 - 8.2e-32 110.5 0.6 2.6e-31 108.9 0.6 1.6 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF67496 - 0.0055 16.0 0.0 0.0083 15.4 0.0 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp GST_C_3 PF14497.6 ORF67306 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF67306 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF67306 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF67306 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF67306 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain adh_short PF00106.25 ORF67271 - 4.3e-13 49.2 0.0 3.9e-10 39.5 0.0 2.0 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF67271 - 5.2e-09 36.0 0.0 7.1e-09 35.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase ATP-synt_B PF00430.18 ORF65974 - 1.2e-08 35.1 18.9 1.1e-07 32.0 18.9 2.0 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) EI24 PF07264.11 ORF65974 - 0.0029 17.9 0.2 0.0037 17.5 0.2 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) V-ATPase_G PF03179.15 ORF65974 - 0.011 16.3 14.6 0.015 15.8 14.6 1.2 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF3054 PF11255.8 ORF65974 - 0.037 14.5 3.4 0.063 13.8 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3054) DUF1175 PF06672.11 ORF65886 - 8.1e-76 254.6 0.1 9.6e-76 254.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1175) NLPC_P60 PF00877.19 ORF65886 - 0.00048 20.1 1.9 0.002 18.1 1.9 2.0 1 1 0 1 1 1 1 NlpC/P60 family DUF1998 PF09369.10 ORF65549 - 3.4e-18 66.2 1.2 5e-18 65.6 1.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) adh_short PF00106.25 ORF63464 - 2.3e-09 37.0 0.1 3.2e-09 36.5 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF63464 - 9.9e-05 22.0 0.0 0.00013 21.7 0.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase ATP-synt_B PF00430.18 ORF61988 - 1.2e-08 35.1 18.9 1.1e-07 32.0 18.9 2.0 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) EI24 PF07264.11 ORF61988 - 0.0029 17.9 0.2 0.0037 17.5 0.2 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) V-ATPase_G PF03179.15 ORF61988 - 0.011 16.3 14.6 0.015 15.8 14.6 1.2 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF3054 PF11255.8 ORF61988 - 0.037 14.5 3.4 0.063 13.8 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3054) HTH_23 PF13384.6 ORF61438 - 0.085 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain RRM_1 PF00076.22 ORF59351 - 3.3e-12 46.1 0.0 7.9e-12 44.8 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pro_isomerase PF00160.21 ORF59351 - 7.5e-11 42.6 0.1 1.6e-10 41.4 0.0 1.6 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF4224 PF13986.6 ORF59351 - 0.17 11.8 0.2 0.29 11.1 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4224) Raf1_HTH PF18579.1 ORF59211 - 0.0061 16.2 0.1 0.029 14.0 0.0 2.1 3 0 0 3 3 3 1 Rubisco accumulation factor 1 helix turn helix domain DHHC PF01529.20 ORF56468 - 7.7 6.6 10.9 38 4.4 7.5 2.3 1 1 1 2 2 2 0 DHHC palmitoyltransferase zf-CCHC PF00098.23 ORF55711 - 0.00042 20.3 5.2 0.00085 19.3 5.2 1.6 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_5 PF14787.6 ORF55711 - 0.0023 17.6 7.2 0.0065 16.2 7.2 1.8 1 0 0 1 1 1 1 GAG-polyprotein viral zinc-finger zf-CCHC_4 PF14392.6 ORF55711 - 0.065 13.0 1.3 0.12 12.2 1.3 1.4 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_2 PF13696.6 ORF55711 - 0.47 10.3 2.4 0.76 9.7 2.4 1.4 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_3 PF13917.6 ORF55711 - 3.8 7.5 8.7 0.52 10.3 3.6 2.2 2 0 0 2 2 2 0 Zinc knuckle PG_binding_2 PF08823.11 ORF55544 - 7.7e-05 22.9 0.0 0.31 11.4 0.0 3.2 3 0 0 3 3 3 2 Putative peptidoglycan binding domain GST_C_3 PF14497.6 ORF52207 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF52207 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF52207 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF52207 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF52207 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Glyco_transf_8 PF01501.20 ORF50447 - 5.5e-09 35.9 4.2 3.2e-06 26.9 4.2 2.1 1 1 0 1 1 1 1 Glycosyl transferase family 8 Mannosyl_trans3 PF11051.8 ORF50447 - 0.036 13.4 0.0 0.052 12.9 0.0 1.2 1 0 0 1 1 1 0 Mannosyltransferase putative DUF1298 PF06974.13 ORF49960 - 0.00034 20.6 0.0 0.00051 20.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) SBP_bac_6 PF13343.6 ORF49960 - 0.051 13.0 0.0 1.4 8.3 0.0 2.4 3 0 0 3 3 3 0 Bacterial extracellular solute-binding protein Mob1_phocein PF03637.17 ORF48965 - 0.17 11.9 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Mob1/phocein family Mob1_phocein PF03637.17 ORF47173 - 0.17 11.9 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Mob1/phocein family GYF PF02213.16 ORF43653 - 4.1e-11 42.4 1.8 7.9e-11 41.4 1.8 1.5 1 0 0 1 1 1 1 GYF domain OrfB_Zn_ribbon PF07282.11 ORF43653 - 0.012 15.5 1.5 0.033 14.1 1.5 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain TPR_1 PF00515.28 ORF41204 - 5.6e-11 41.8 2.3 2.4e-06 27.1 0.2 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF41204 - 1e-10 40.9 1.0 2.9e-06 27.0 0.1 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF41204 - 8.2e-07 29.2 0.0 0.001 19.3 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF41204 - 2.3e-06 27.4 2.2 0.00046 20.2 0.4 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF41204 - 1.1e-05 25.0 0.0 5.8e-05 22.7 0.0 2.3 2 1 1 3 3 3 2 TPR repeat TPR_7 PF13176.6 ORF41204 - 0.00014 21.6 0.1 0.12 12.4 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF41204 - 0.001 18.8 0.1 0.24 11.3 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat SPO22 PF08631.10 ORF41204 - 0.0017 17.9 1.7 0.0023 17.5 0.2 1.8 2 0 0 2 2 2 1 Meiosis protein SPO22/ZIP4 like BLI1 PF17324.2 ORF41204 - 0.0074 16.9 0.1 0.028 15.1 0.0 2.0 2 0 0 2 2 2 1 BLOC-1 interactor 1 TPR_6 PF13174.6 ORF41204 - 0.019 15.6 0.1 0.22 12.2 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF41204 - 0.051 14.2 0.0 0.71 10.6 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat FumaraseC_C PF10415.9 ORF40840 - 1.4e-05 25.4 10.4 0.058 13.8 0.7 4.4 4 0 0 4 4 4 2 Fumarase C C-terminus PhageMin_Tail PF10145.9 ORF40840 - 0.00036 20.4 15.0 0.02 14.8 2.7 3.1 2 1 0 3 3 3 3 Phage-related minor tail protein ISP1_C PF18161.1 ORF40840 - 0.0034 17.4 0.0 1.7 8.7 0.0 3.2 1 1 1 3 3 3 1 ISP1 C-terminal RHH_4 PF13467.6 ORF40840 - 0.023 14.6 3.7 28 4.7 0.1 4.0 3 1 1 4 4 4 0 Ribbon-helix-helix domain Phage_CI_repr PF07022.13 ORF40840 - 0.055 13.6 0.1 6.6 6.9 0.0 3.5 3 1 0 3 3 3 0 Bacteriophage CI repressor helix-turn-helix domain DUF3235 PF11574.8 ORF40840 - 0.062 14.2 5.0 7.9 7.4 1.0 3.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3235) Get5_C PF18514.1 ORF40840 - 0.063 13.0 11.5 17 5.2 0.0 5.0 5 0 0 5 5 5 0 Get5 C-terminal domain DUF4213 PF13938.6 ORF40840 - 0.071 13.3 1.1 8.2 6.7 0.2 2.6 2 1 0 2 2 2 0 Putative heavy-metal chelation NTP_transf_5 PF14907.6 ORF40840 - 0.19 11.3 0.2 87 2.6 0.0 3.5 3 1 1 4 4 4 0 Uncharacterised nucleotidyltransferase DUF1104 PF06518.11 ORF40840 - 0.22 11.9 6.2 0.16 12.4 4.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1104) OKR_DC_1_C PF03711.15 ORF40840 - 0.32 11.3 1.1 0.7 10.2 0.4 1.9 2 1 1 3 3 2 0 Orn/Lys/Arg decarboxylase, C-terminal domain HTH_Tnp_ISL3 PF13542.6 ORF40840 - 0.49 9.8 1.4 7.8 6.0 0.1 3.2 3 1 1 4 4 4 0 Helix-turn-helix domain of transposase family ISL3 QslA_E PF18226.1 ORF40840 - 1.4 8.9 7.1 14 5.7 0.1 3.9 2 1 2 4 4 4 0 LasR-specific antiactivator QslA chain E Pox_A32 PF04665.12 ORF40757 - 2.1e-05 24.1 0.0 2.7e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein Rick_17kDa_Anti PF05433.15 ORF40217 - 0.025 14.4 1.4 0.025 14.4 1.4 3.5 3 0 0 3 3 3 0 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 ORF40217 - 0.03 14.3 18.7 0.39 10.8 1.0 3.4 3 0 0 3 3 3 0 Glycine zipper Phage_holin_7_1 PF16081.5 ORF40217 - 0.12 12.6 0.1 0.22 11.7 0.1 1.4 1 0 0 1 1 1 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family GST_C_3 PF14497.6 ORF39446 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF39446 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF39446 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF39446 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF39446 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain PhoLip_ATPase_C PF16212.5 ORF35828 - 0.003 17.3 1.5 0.0039 17.0 1.5 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal PrgI PF12666.7 ORF35828 - 7.3 7.4 7.4 3.6 8.4 0.8 2.2 1 1 1 2 2 2 0 PrgI family protein AAA_7 PF12775.7 ORF34806 - 4.7e-16 58.8 0.0 7.1e-16 58.2 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF34806 - 4e-11 43.0 0.3 3.8e-10 39.9 0.1 2.1 2 0 0 2 2 2 1 AAA+ lid domain 3Beta_HSD PF01073.19 ORF34001 - 0.044 12.8 0.0 0.11 11.5 0.0 1.5 1 1 1 2 2 2 0 3-beta hydroxysteroid dehydrogenase/isomerase family N6-adenineMlase PF10237.9 ORF34001 - 0.072 12.9 0.0 0.11 12.3 0.0 1.6 1 1 0 1 1 1 0 Probable N6-adenine methyltransferase NAD_binding_4 PF07993.12 ORF34001 - 0.11 11.6 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Male sterility protein Histone PF00125.24 ORF32931 - 0.014 15.7 0.1 0.014 15.7 0.1 2.5 1 1 0 2 2 2 0 Core histone H2A/H2B/H3/H4 EF-hand_1 PF00036.32 ORF30382 - 3.2e-23 79.5 16.7 6.8e-07 28.4 0.7 4.9 5 0 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF30382 - 3.5e-20 72.2 11.0 2.6e-10 40.6 0.5 2.6 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF30382 - 4e-18 63.7 19.4 7.4e-06 25.5 1.8 4.9 2 2 1 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF30382 - 4.2e-18 63.9 13.0 2.3e-05 23.7 1.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF30382 - 9e-17 60.7 9.5 5.8e-09 35.7 0.3 4.4 3 1 1 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF30382 - 6e-08 33.0 5.0 0.0017 18.6 0.3 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF30382 - 0.00017 21.9 0.7 0.051 13.9 0.0 3.4 2 2 1 3 3 3 1 EF-hand domain EF-hand_13 PF17958.1 ORF30382 - 0.0045 16.8 0.1 0.43 10.4 0.0 3.4 3 1 1 4 4 4 1 EF-hand domain Caleosin PF05042.13 ORF30382 - 0.0068 16.4 2.9 0.67 9.9 0.4 3.1 1 1 3 4 4 4 2 Caleosin related protein EF-hand_4 PF12763.7 ORF30382 - 0.014 15.3 7.5 0.85 9.6 0.4 3.1 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Herpes_UL36 PF03586.13 ORF30382 - 0.026 13.8 0.1 0.15 11.4 0.1 2.0 1 1 1 2 2 2 0 Herpesvirus UL36 tegument protein LRR19-TM PF15176.6 ORF30174 - 0.32 11.0 0.0 0.32 11.0 0.0 2.4 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain MASE1 PF05231.14 ORF29680 - 0.036 13.2 6.9 0.08 12.1 7.2 1.5 1 1 0 1 1 1 0 MASE1 Pkinase PF00069.25 ORF29659 - 1.2e-49 169.1 0.0 1.3e-49 168.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29659 - 3.5e-26 92.1 0.0 3.9e-26 91.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF29659 - 0.0029 17.0 0.0 0.034 13.4 0.0 2.0 2 0 0 2 2 2 1 Kinase-like APH PF01636.23 ORF29659 - 0.017 15.0 0.0 0.023 14.6 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF29659 - 0.02 13.7 0.0 0.03 13.1 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Haspin_kinase PF12330.8 ORF29659 - 0.031 13.2 0.0 0.037 13.0 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain PglD_N PF17836.1 ORF29659 - 0.16 12.7 0.2 0.32 11.7 0.1 1.6 2 0 0 2 2 2 0 PglD N-terminal domain Kdo PF06293.14 ORF29659 - 0.18 11.2 0.0 0.29 10.5 0.0 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Auxin_canalis PF05703.11 ORF28114 - 0.077 12.9 3.8 0.091 12.7 3.8 1.3 1 1 0 1 1 1 0 Auxin canalisation RNA_pol PF00940.19 ORF28036 - 2.3e-41 142.0 0.1 4.1e-41 141.2 0.1 1.4 1 1 0 1 1 1 1 DNA-dependent RNA polymerase Rhodanese_C PF12368.8 ORF2737 - 4e-19 68.8 15.5 7.9e-19 67.8 15.5 1.5 1 0 0 1 1 1 1 Rhodanase C-terminal Rhodanese PF00581.20 ORF2737 - 9.2e-13 48.7 0.0 1.6e-12 47.9 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain Zeta_toxin PF06414.12 ORF2737 - 0.046 13.0 0.0 0.067 12.5 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin Chloroa_b-bind PF00504.21 ORF26815 - 5.2e-36 124.6 1.2 2.2e-35 122.6 0.1 1.9 2 0 0 2 2 2 1 Chlorophyll A-B binding protein PRK PF00485.18 ORF26774 - 0.0002 21.1 0.0 0.00039 20.2 0.0 1.5 1 1 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 ORF26774 - 0.0014 19.2 0.1 0.021 15.4 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF26774 - 0.0046 17.1 0.0 0.07 13.3 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF26774 - 0.0065 16.9 0.0 0.0076 16.6 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF26774 - 0.0098 16.2 0.0 0.018 15.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF26774 - 0.054 13.1 0.0 0.096 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF26774 - 0.078 12.7 0.0 0.29 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF26774 - 0.18 11.3 0.0 1.7 8.1 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_19 PF13245.6 ORF26774 - 0.18 12.1 0.0 0.31 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF2201_N PF13203.6 ORF22631 - 0.25 10.9 2.7 0.29 10.7 2.7 1.3 1 0 0 1 1 1 0 Putative metallopeptidase domain Neural_ProG_Cyt PF06567.11 ORF22631 - 0.68 10.2 8.6 0.16 12.2 5.1 1.8 2 0 0 2 2 2 0 Neural chondroitin sulphate proteoglycan cytoplasmic domain Ig_C19orf38 PF17737.1 ORF2217 - 0.059 13.7 0.0 0.088 13.2 0.0 1.3 1 0 0 1 1 1 0 Ig domain in C19orf38 (HIDE1) RNA_pol_Rpb5_C PF01191.19 ORF21480 - 1.4e-32 111.4 0.4 4.6e-32 109.7 0.4 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb5_N PF03871.14 ORF21480 - 4.1e-17 62.5 0.3 9.9e-17 61.3 0.2 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb5, N-terminal domain Sof1 PF04158.14 ORF21480 - 0.013 15.7 0.2 0.031 14.5 0.2 1.6 1 0 0 1 1 1 0 Sof1-like domain Glycos_transf_3 PF00591.21 ORF21480 - 0.051 13.2 0.0 0.076 12.6 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family, a/b domain Tfb5 PF06331.12 ORF21480 - 2.4 8.2 5.0 1.7 8.7 0.4 2.6 3 0 0 3 3 3 0 Transcription factor TFIIH complex subunit Tfb5 Methyltransf_11 PF08241.12 ORF18862 - 1.8e-22 79.8 0.0 3e-22 79.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF18862 - 3.9e-17 62.8 0.0 6.6e-17 62.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF18862 - 3.9e-14 52.5 0.0 5.4e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 ORF18862 - 6.1e-14 52.1 0.0 8.5e-14 51.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF18862 - 1.1e-12 48.1 0.0 1.5e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF18862 - 2.5e-09 37.8 0.0 4e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 ORF18862 - 0.00022 21.2 0.0 0.0003 20.7 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_29 PF03141.16 ORF18862 - 0.0052 15.4 0.0 0.0062 15.1 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_2 PF00891.18 ORF18862 - 0.0077 15.6 0.0 0.01 15.2 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain NNMT_PNMT_TEMT PF01234.17 ORF18862 - 0.045 12.9 0.0 0.062 12.5 0.0 1.3 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family Sel1 PF08238.12 ORF17274 - 2e-18 66.4 9.4 1.9e-08 34.7 0.2 3.8 4 0 0 4 4 4 3 Sel1 repeat Herpes_ori_bp PF02399.15 ORF17274 - 0.033 12.2 0.0 0.045 11.8 0.0 1.1 1 0 0 1 1 1 0 Origin of replication binding protein DUF1515 PF07439.11 ORF17274 - 0.18 11.8 1.6 0.79 9.8 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1515) PPR_2 PF13041.6 ORF15153 - 0.00057 20.0 0.0 0.00093 19.3 0.0 1.4 1 0 0 1 1 1 1 PPR repeat family DUF3935 PF13071.6 ORF14782 - 8.8 7.0 8.9 8.7 7.0 0.4 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF3935) NTS PF15447.6 ORF13222 - 0.29 11.6 1.6 8.4 7.0 0.0 3.0 3 0 0 3 3 3 0 N-terminal segments of PfEMP1 adh_short PF00106.25 ORF110721 - 5.5e-28 97.7 0.1 6.9e-28 97.4 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF110721 - 2e-15 57.0 0.0 2.2e-15 56.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.10 ORF110721 - 0.0077 15.6 0.1 0.0097 15.3 0.1 1.3 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) KR PF08659.10 ORF110721 - 0.019 14.9 0.0 0.026 14.4 0.0 1.1 1 0 0 1 1 1 0 KR domain Aldedh PF00171.22 ORF110171 - 4.2e-06 25.6 0.0 6.7e-06 24.9 0.0 1.4 1 1 0 1 1 1 1 Aldehyde dehydrogenase family C2 PF00168.30 ORF103507 - 0.00027 21.2 0.0 0.00037 20.7 0.0 1.2 1 0 0 1 1 1 1 C2 domain GST_C_3 PF14497.6 ORF102432 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF102432 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF102432 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF102432 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF102432 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Auxin_canalis PF05703.11 ORF101440 - 0.077 12.9 3.8 0.091 12.7 3.8 1.3 1 1 0 1 1 1 0 Auxin canalisation His_Phos_1 PF00300.22 ORF101423 - 5e-21 75.3 0.0 1.1e-11 44.8 0.0 2.0 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) ICL PF00463.21 ORF100956 - 2e-73 247.7 1.6 2.2e-73 247.6 1.6 1.0 1 0 0 1 1 1 1 Isocitrate lyase family ADSL_C PF10397.9 ORF100956 - 0.085 13.4 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminus TPP_enzyme_M PF00205.22 NODE_35069_length_616_cov_3.640275_g28080_i0forward_frame_1 - 1.5e-26 92.8 0.0 2.9e-26 91.8 0.0 1.5 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_N PF02776.18 NODE_35069_length_616_cov_3.640275_g28080_i0forward_frame_1 - 9.5e-09 35.1 0.0 1.3e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Ham1p_like PF01725.16 NODE_35069_length_616_cov_3.640275_g28080_i0forward_frame_1 - 0.026 14.5 0.0 0.033 14.1 0.0 1.2 1 0 0 1 1 1 0 Ham1 family UCH PF00443.29 NODE_35049_length_616_cov_130.359725_g28061_i0reverse_frame_1 - 1.5e-22 80.3 3.8 1.6e-22 80.3 3.8 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_35049_length_616_cov_130.359725_g28061_i0reverse_frame_1 - 1.1e-06 28.5 1.4 1.2e-06 28.4 1.4 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PRESAN PF09687.10 NODE_35044_length_616_cov_190.290878_g28057_i0reverse_frame_1 - 0.081 13.5 1.1 0.13 12.8 1.1 1.3 1 0 0 1 1 1 0 Plasmodium RESA N-terminal Conotoxin_I2 PF17557.2 NODE_35042_length_616_cov_218.005164_g28055_i0reverse_frame_1 - 3.5 7.8 5.0 30 4.8 0.9 2.5 2 0 0 2 2 2 0 I2-superfamily conotoxins DA1-like PF12315.8 NODE_35026_length_617_cov_2.853952_g28040_i0reverse_frame_1 - 0.41 10.0 5.0 0.072 12.5 0.9 1.8 2 1 1 3 3 3 0 Protein DA1 LCAT PF02450.15 NODE_35020_length_617_cov_82.190722_g28034_i0reverse_frame_1 - 0.2 10.7 0.0 0.27 10.3 0.0 1.1 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase ABC_membrane PF00664.23 NODE_35012_length_617_cov_145.226804_g28026_i0forward_frame_1 - 1.8e-10 40.9 0.1 2.8e-10 40.3 0.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF2207 PF09972.9 NODE_35012_length_617_cov_145.226804_g28026_i0forward_frame_1 - 0.0023 16.7 0.1 0.0028 16.5 0.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) YqfQ PF14181.6 NODE_35012_length_617_cov_145.226804_g28026_i0forward_frame_1 - 4.8 7.3 6.3 7 6.8 6.3 1.1 1 0 0 1 1 1 0 YqfQ-like protein zf-B_box PF00643.24 NODE_35007_length_617_cov_204.297251_g28021_i0forward_frame_1 - 3.8 7.7 8.7 6.4 7.0 8.7 1.3 1 0 0 1 1 1 0 B-box zinc finger OpgC_C PF10129.9 NODE_34973_length_618_cov_47.459691_g27990_i0forward_frame_1 - 0.27 10.0 0.5 0.38 9.6 0.5 1.2 1 0 0 1 1 1 0 OpgC protein POLO_box PF00659.18 NODE_34971_length_618_cov_58.428816_g27668_i1reverse_frame_1 - 1.9e-09 37.6 0.3 3.7e-09 36.7 0.1 1.6 2 0 0 2 2 2 1 POLO box duplicated region Ndufs5 PF10200.9 NODE_34971_length_618_cov_58.428816_g27668_i1reverse_frame_1 - 0.03 14.6 0.3 0.068 13.4 0.3 1.6 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa p47_phox_C PF08944.11 NODE_34963_length_618_cov_90.751286_g27981_i0reverse_frame_1 - 0.17 11.3 8.3 7.7 6.0 0.1 4.3 4 0 0 4 4 4 0 NADPH oxidase subunit p47Phox, C terminal domain RCC1_2 PF13540.6 NODE_34963_length_618_cov_90.751286_g27981_i0forward_frame_1 - 0.061 13.2 6.8 1.1 9.2 0.0 3.6 4 0 0 4 4 4 0 Regulator of chromosome condensation (RCC1) repeat Tetraspanin PF00335.20 NODE_34929_length_618_cov_38678.564322_g27955_i0forward_frame_1 - 1.8e-05 24.6 2.6 4.1e-05 23.4 0.9 1.9 1 1 1 2 2 2 1 Tetraspanin family DUF4250 PF14056.6 NODE_34928_length_619_cov_2.464041_g27954_i0reverse_frame_2 - 2.9 7.9 7.7 3.5 7.6 0.1 3.4 2 1 0 3 3 3 0 Domain of unknown function (DUF4250) YadA_head PF05658.14 NODE_34919_length_619_cov_5.082192_g27945_i0reverse_frame_2 - 2.5e-16 59.6 40.6 1.2e-06 28.7 3.5 6.6 7 1 1 8 8 8 5 Head domain of trimeric autotransporter adhesin ESPR PF13018.6 NODE_34919_length_619_cov_5.082192_g27945_i0reverse_frame_2 - 1.5e-10 40.6 0.1 5.8e-10 38.8 0.1 2.1 2 0 0 2 2 2 1 Extended Signal Peptide of Type V secretion system MIT PF04212.18 NODE_34919_length_619_cov_5.082192_g27945_i0reverse_frame_2 - 0.17 12.0 0.3 0.38 10.9 0.1 1.7 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain TPR_2 PF07719.17 NODE_34919_length_619_cov_5.082192_g27945_i0reverse_frame_2 - 0.28 11.4 1.7 2.5 8.4 0.1 2.7 2 1 0 3 3 3 0 Tetratricopeptide repeat DUF2674 PF10879.8 NODE_34872_length_620_cov_2.112821_g27904_i0forward_frame_3 - 0.057 13.0 0.5 0.15 11.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2674) Lipase_GDSL_2 PF13472.6 NODE_34870_length_620_cov_2.658120_g27902_i0forward_frame_3 - 1e-20 74.9 0.0 1.2e-20 74.6 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 NODE_34870_length_620_cov_2.658120_g27902_i0forward_frame_3 - 7.8e-09 35.8 0.0 9.6e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase OSK PF17182.4 NODE_34870_length_620_cov_2.658120_g27902_i0forward_frame_3 - 0.014 14.7 0.0 0.022 14.0 0.0 1.3 1 0 0 1 1 1 0 OSK domain PTH2 PF01981.16 NODE_34828_length_620_cov_1795.126496_g27862_i0forward_frame_3 - 4.9e-41 139.7 0.0 6.5e-41 139.3 0.0 1.2 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Peptidase_M22 PF00814.25 NODE_34828_length_620_cov_1795.126496_g27862_i0forward_frame_3 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Glycoprotease family OTT_1508_deam PF14441.6 NODE_34821_length_621_cov_2.259386_g27856_i0forward_frame_2 - 0.072 13.1 0.1 0.42 10.7 0.1 2.1 2 0 0 2 2 2 0 OTT_1508-like deaminase Got1 PF04178.12 NODE_34820_length_621_cov_2.774744_g27855_i0reverse_frame_3 - 1.3 9.5 8.1 0.25 11.8 4.3 1.7 2 0 0 2 2 2 0 Got1/Sft2-like family FAM165 PF14981.6 NODE_34816_length_621_cov_3.919795_g27851_i0reverse_frame_2 - 0.11 12.3 0.1 0.26 11.1 0.1 1.6 1 0 0 1 1 1 0 FAM165 family CDKN3 PF05706.12 NODE_34814_length_621_cov_59.952218_g27850_i0forward_frame_2 - 0.015 15.0 0.2 0.025 14.2 0.2 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Phage_integrase PF00589.22 NODE_34809_length_621_cov_92.186007_g27846_i0forward_frame_3 - 0.0032 17.3 0.3 0.0049 16.7 0.3 1.3 1 0 0 1 1 1 1 Phage integrase family DUF836 PF05768.14 NODE_34809_length_621_cov_92.186007_g27846_i0forward_frame_3 - 0.02 15.3 1.6 0.041 14.3 1.6 1.5 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) FF PF01846.19 NODE_34802_length_621_cov_136.952218_g27839_i0forward_frame_3 - 0.13 12.5 0.3 0.36 11.0 0.3 1.7 1 0 0 1 1 1 0 FF domain RCC1_2 PF13540.6 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.00016 21.4 2.9 4.2 7.3 0.1 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.0011 19.1 1.5 0.87 9.7 0.1 3.0 3 0 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Radial_spoke PF04712.12 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.002 17.1 4.2 0.0025 16.8 4.2 1.2 1 0 0 1 1 1 1 Radial spokehead-like protein MPP6 PF10175.9 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.0047 17.4 2.5 0.011 16.2 0.1 2.1 2 0 0 2 2 2 1 M-phase phosphoprotein 6 RNA_pol_3_Rpc31 PF11705.8 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.032 14.5 2.1 0.032 14.5 2.1 1.5 2 0 0 2 2 2 0 DNA-directed RNA polymerase III subunit Rpc31 Phage_P2_GpU PF06995.11 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.059 13.0 0.2 30 4.3 0.0 3.0 1 1 2 3 3 3 0 Phage P2 GpU NOA36 PF06524.12 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.12 11.7 0.3 0.14 11.4 0.3 1.2 1 0 0 1 1 1 0 NOA36 protein Adhes-Ig_like PF09085.10 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.24 11.5 3.5 1.1 9.4 3.3 2.1 1 1 1 2 2 2 0 Adhesion molecule, immunoglobulin-like 40S_SA_C PF16122.5 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.29 12.5 9.8 0.75 11.2 9.8 1.6 1 0 0 1 1 1 0 40S ribosomal protein SA C-terminus PAC1 PF16094.5 NODE_34795_length_621_cov_213.018771_g27832_i0reverse_frame_3 - 0.66 9.1 3.8 1.1 8.4 3.8 1.3 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Pex14_N PF04695.13 NODE_34795_length_621_cov_213.018771_g27832_i0forward_frame_3 - 0.0094 16.6 1.8 0.0094 16.6 1.8 1.4 1 1 0 1 1 1 1 Peroxisomal membrane anchor protein (Pex14p) conserved region SR-25 PF10500.9 NODE_34795_length_621_cov_213.018771_g27832_i0forward_frame_3 - 0.012 15.3 17.8 0.016 14.8 17.8 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein SPX PF03105.19 NODE_34795_length_621_cov_213.018771_g27832_i0forward_frame_3 - 0.045 13.7 0.7 0.04 13.8 0.7 1.1 1 0 0 1 1 1 0 SPX domain Sporozoite_P67 PF05642.11 NODE_34795_length_621_cov_213.018771_g27832_i0forward_frame_3 - 0.48 8.4 7.8 0.54 8.3 7.8 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF1635 PF07795.11 NODE_34795_length_621_cov_213.018771_g27832_i0forward_frame_3 - 0.88 9.4 4.4 1.3 8.9 4.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) Chorion_2 PF03964.15 NODE_34795_length_621_cov_213.018771_g27832_i0forward_frame_3 - 0.95 10.3 11.4 0.71 10.7 9.5 1.7 2 0 0 2 2 2 0 Chorion family 2 Macoilin PF09726.9 NODE_34795_length_621_cov_213.018771_g27832_i0forward_frame_3 - 1.8 7.0 5.4 2.2 6.7 5.4 1.0 1 0 0 1 1 1 0 Macoilin family Herpes_capsid PF06112.11 NODE_34795_length_621_cov_213.018771_g27832_i0forward_frame_3 - 2.1 8.4 12.7 3 7.9 12.7 1.3 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein CCDC106 PF15794.5 NODE_34795_length_621_cov_213.018771_g27832_i0forward_frame_3 - 2.6 7.7 5.7 3.2 7.4 5.7 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Homeobox_KN PF05920.11 NODE_34787_length_621_cov_456.843003_g27824_i0forward_frame_2 - 3.1e-12 46.2 1.9 8.6e-12 44.8 1.9 1.7 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_34787_length_621_cov_456.843003_g27824_i0forward_frame_2 - 1e-08 34.9 0.8 2.3e-08 33.8 0.8 1.5 1 0 0 1 1 1 1 Homeodomain HTH_Tnp_4 PF13613.6 NODE_34787_length_621_cov_456.843003_g27824_i0forward_frame_2 - 0.071 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease Phage_CI_repr PF07022.13 NODE_34787_length_621_cov_456.843003_g27824_i0forward_frame_2 - 0.099 12.7 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain DUF5586 PF17824.1 NODE_34786_length_621_cov_468.240614_g27823_i0forward_frame_3 - 0.027 13.6 2.2 0.035 13.2 2.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5586) DUF3914 PF13053.6 ORF98339 - 0.005 17.1 1.5 0.012 15.9 0.3 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3914) ERM PF00769.19 ORF9829 - 0.2 11.4 3.6 0.25 11.1 3.6 1.3 1 0 0 1 1 1 0 Ezrin/radixin/moesin family EF-hand_7 PF13499.6 ORF97802 - 4.3e-11 43.1 0.7 4.3e-11 43.1 0.7 2.8 3 1 0 3 3 3 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF97802 - 1.6e-09 36.6 0.1 7.1e-07 28.3 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF97802 - 1.1e-08 34.3 0.4 2.3e-05 24.0 0.1 3.1 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF97802 - 4.6e-05 22.7 0.2 0.00015 21.1 0.2 2.0 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF97802 - 0.00046 20.0 0.8 0.0032 17.3 0.1 2.7 2 2 1 3 3 3 1 EF-hand domain pair U79_P34 PF03064.16 ORF97802 - 0.0014 18.1 0.9 0.0021 17.5 0.1 1.7 1 1 0 1 1 1 1 HSV U79 / HCMV P34 GAGA_bind PF06217.12 ORF97802 - 0.35 11.1 3.8 0.43 10.8 3.8 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family SPARC_Ca_bdg PF10591.9 ORF97802 - 1.9 8.8 9.6 0.16 12.3 3.9 2.1 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Mg_chelatase PF01078.21 ORF96264 - 0.046 13.1 0.3 0.071 12.5 0.3 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI tRNA-synt_1e PF01406.19 ORF95229 - 0.0012 18.2 0.8 0.0016 17.8 0.8 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain BLOC1_2 PF10046.9 ORF95229 - 0.012 15.9 1.6 0.012 15.9 1.6 1.8 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 LMBR1 PF04791.16 ORF95229 - 5.3 5.8 6.0 6.9 5.5 6.0 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein zf-CCHC PF00098.23 ORF94758 - 4.8e-09 35.9 1.8 8.1e-09 35.2 1.8 1.4 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_3 PF13917.6 ORF94758 - 0.0031 17.4 0.2 0.0049 16.8 0.2 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 ORF94758 - 0.022 14.6 0.2 0.033 14.0 0.2 1.3 1 0 0 1 1 1 0 Zinc knuckle FKBP_C PF00254.28 ORF93150 - 2e-28 98.5 0.0 3.7e-28 97.7 0.0 1.4 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_N PF01346.18 ORF93150 - 4.5e-20 72.4 0.0 5.6e-20 72.1 0.0 1.1 1 0 0 1 1 1 1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HemY_N PF07219.13 ORF91238 - 0.44 10.8 0.1 0.44 10.8 0.1 2.1 2 0 0 2 2 2 0 HemY protein N-terminus UPF0542 PF15086.6 ORF88748 - 0.066 13.1 1.0 0.066 13.1 1.0 2.4 2 1 1 3 3 3 0 Uncharacterised protein family UPF0542 FtsX PF02687.21 ORF88748 - 0.25 11.8 15.0 0.68 10.4 3.7 3.1 3 1 0 3 3 3 0 FtsX-like permease family Ninjurin PF04923.12 ORF88748 - 0.5 10.3 11.1 0.63 10.0 2.2 3.0 3 0 0 3 3 3 0 Ninjurin FeoB_associated PF12669.7 ORF88748 - 3.1 8.3 0.0 3.1 8.3 0.0 2.9 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein RRM_1 PF00076.22 ORF87291 - 6.8e-09 35.4 0.0 2.2e-08 33.8 0.0 1.9 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GAGA_bind PF06217.12 ORF87291 - 0.088 13.1 16.1 0.13 12.6 16.1 1.3 1 0 0 1 1 1 0 GAGA binding protein-like family UPF0242 PF06785.11 ORF87291 - 2.8 8.0 18.6 4.1 7.5 18.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ALMT PF11744.8 ORF87291 - 7 5.4 13.4 8.5 5.1 13.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Arginase PF00491.21 ORF86509 - 2.9e-66 223.8 0.5 3.5e-66 223.6 0.5 1.0 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.7 ORF86509 - 0.088 13.0 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 UPF0489 domain Spectrin PF00435.21 ORF86496 - 0.0038 17.7 14.8 0.0044 17.5 5.9 3.1 1 1 1 2 2 2 1 Spectrin repeat PRKG1_interact PF15898.5 ORF86496 - 0.0047 17.8 14.9 0.0047 17.8 14.9 2.5 2 1 1 3 3 3 1 cGMP-dependent protein kinase interacting domain SlyX PF04102.12 ORF86496 - 0.0057 17.2 4.8 1.5 9.5 1.3 3.9 2 1 1 3 3 3 1 SlyX Fib_alpha PF08702.10 ORF86496 - 0.009 16.2 17.4 0.097 12.9 5.3 2.8 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family GAS PF13851.6 ORF86496 - 0.028 13.8 28.6 0.065 12.6 22.6 3.2 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Rootletin PF15035.6 ORF86496 - 0.031 14.3 18.0 1.9 8.5 18.0 2.1 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Phage_GP20 PF06810.11 ORF86496 - 0.049 13.4 24.0 0.18 11.6 15.3 3.2 1 1 2 3 3 3 0 Phage minor structural protein GP20 UPF0515 PF15135.6 ORF86496 - 0.052 12.9 6.0 0.068 12.5 6.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 HsbA PF12296.8 ORF86496 - 0.065 13.7 4.2 0.26 11.7 2.8 2.3 1 1 1 2 2 2 0 Hydrophobic surface binding protein A EzrA PF06160.12 ORF86496 - 0.11 10.6 22.8 0.045 11.9 19.8 1.7 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA DASH_Dam1 PF08653.10 ORF86496 - 0.12 12.2 4.5 1.7 8.5 0.7 3.0 3 1 0 3 3 2 0 DASH complex subunit Dam1 Macoilin PF09726.9 ORF86496 - 0.14 10.7 22.7 0.5 8.9 22.7 1.7 1 1 0 1 1 1 0 Macoilin family Snapin_Pallidin PF14712.6 ORF86496 - 0.22 12.0 15.3 0.41 11.1 3.4 3.7 2 1 3 5 5 5 0 Snapin/Pallidin Seryl_tRNA_N PF02403.22 ORF86496 - 0.22 11.7 21.6 0.29 11.4 13.7 3.4 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain OmpH PF03938.14 ORF86496 - 0.26 11.6 24.6 0.29 11.5 5.0 3.1 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) DUF3450 PF11932.8 ORF86496 - 0.26 10.6 16.6 0.26 10.5 2.8 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) DUF1140 PF06600.11 ORF86496 - 0.27 11.7 7.0 0.45 11.0 6.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1140) NPV_P10 PF05531.12 ORF86496 - 0.45 11.0 5.7 1.8 9.1 2.2 2.8 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Uteroglobin PF01099.17 ORF86496 - 0.6 10.5 10.5 0.11 12.9 1.3 3.3 3 1 1 4 4 4 0 Uteroglobin family Yuri_gagarin PF15934.5 ORF86496 - 0.61 9.9 16.9 3.5 7.4 5.0 2.5 1 1 1 2 2 2 0 Yuri gagarin Tropomyosin_1 PF12718.7 ORF86496 - 0.64 10.2 27.9 0.18 11.9 22.1 2.5 1 1 2 3 3 3 0 Tropomyosin like FlaC_arch PF05377.11 ORF86496 - 0.7 10.3 13.7 13 6.3 2.2 4.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Lectin_N PF03954.14 ORF86496 - 1.4 8.7 9.3 1.5 8.6 3.4 2.8 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Syntaxin-6_N PF09177.11 ORF86496 - 1.4 9.5 13.8 19 5.9 0.1 3.4 1 1 2 3 3 3 0 Syntaxin 6, N-terminal TMF_DNA_bd PF12329.8 ORF86496 - 1.9 8.5 29.0 1.6 8.7 6.6 4.8 2 1 3 5 5 5 0 TATA element modulatory factor 1 DNA binding DUF4164 PF13747.6 ORF86496 - 2 8.7 11.6 0.29 11.4 4.1 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) Exonuc_VII_L PF02601.15 ORF86496 - 2.3 7.7 15.1 3.7 7.0 15.1 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF5320 PF17253.2 ORF86496 - 2.7 9.1 7.2 8.1 7.6 5.2 2.8 2 1 0 2 2 2 0 Family of unknown function (DUF5320) DNA_ligase_A_C PF04679.15 ORF86496 - 3 8.5 5.1 97 3.7 0.4 3.2 1 1 2 3 3 3 0 ATP dependent DNA ligase C terminal region Allexi_40kDa PF05549.11 ORF86496 - 3.5 7.0 7.9 4.6 6.7 6.8 1.8 1 1 0 1 1 1 0 Allexivirus 40kDa protein USP8_interact PF08941.10 ORF86496 - 4.3 7.1 8.0 2.5 7.9 5.2 1.9 2 1 0 2 2 2 0 USP8 interacting DUF4140 PF13600.6 ORF86496 - 4.3 7.8 12.0 94 3.5 6.0 3.9 2 1 1 3 3 3 0 N-terminal domain of unknown function (DUF4140) APG6_N PF17675.1 ORF86496 - 5.4 7.5 28.7 0.37 11.3 17.1 3.0 1 1 2 3 3 3 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF86496 - 7.1 4.4 14.1 9 4.1 14.0 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family FapA PF03961.13 ORF86496 - 9.9 4.6 22.9 58 2.1 22.2 2.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A YqzE PF14038.6 ORF85927 - 0.0078 16.2 1.0 0.0078 16.2 1.0 1.7 2 0 0 2 2 2 1 YqzE-like protein DUF2157 PF09925.9 ORF85927 - 0.054 13.3 0.4 0.21 11.4 0.0 2.1 3 0 0 3 3 3 0 Predicted membrane protein (DUF2157) ROK PF00480.20 ORF84666 - 9.4e-35 120.5 0.5 1.1e-34 120.3 0.5 1.0 1 0 0 1 1 1 1 ROK family Methyltransf_25 PF13649.6 ORF83561 - 2.9e-09 37.5 0.0 7.8e-09 36.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF83561 - 3e-08 34.2 0.1 2.7e-07 31.2 0.1 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF83561 - 2.3e-07 30.7 0.0 3.1e-07 30.3 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF83561 - 5.8e-06 26.2 0.0 9.4e-06 25.6 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF83561 - 0.00044 20.9 0.0 0.00069 20.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF83561 - 0.00089 19.1 0.0 0.0013 18.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 ORF83561 - 0.02 14.2 0.0 0.028 13.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MTS PF05175.14 ORF83561 - 0.2 11.2 0.0 0.51 9.9 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase small domain Ras PF00071.22 ORF81537 - 9e-50 168.4 0.0 1.1e-49 168.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF81537 - 9.1e-34 116.3 0.0 1.3e-33 115.8 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF81537 - 2.1e-12 46.9 0.0 2.4e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF81537 - 0.0002 21.4 0.0 0.00032 20.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF81537 - 0.00026 20.6 0.0 0.017 14.7 0.0 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF81537 - 0.0012 18.2 0.0 0.0015 18.0 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region ATPase_2 PF01637.18 ORF81537 - 0.0026 17.7 0.0 0.0032 17.4 0.0 1.1 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea SRPRB PF09439.10 ORF81537 - 0.0061 16.0 0.0 0.0089 15.5 0.0 1.3 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF81537 - 0.0084 15.3 0.0 0.02 14.0 0.0 1.2 1 1 0 1 1 1 1 G-protein alpha subunit AAA_24 PF13479.6 ORF81537 - 0.031 14.0 0.0 0.065 12.9 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF81537 - 0.034 14.5 0.3 0.047 14.1 0.3 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 ORF81537 - 0.055 13.5 0.0 0.075 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF81537 - 0.066 13.1 0.0 10 6.0 0.0 2.1 2 0 0 2 2 2 0 RsgA GTPase Pentapeptide_2 PF01469.18 ORF81449 - 1 9.3 26.4 0.25 11.3 16.7 2.5 1 1 1 2 2 2 0 Pentapeptide repeats (8 copies) Glyoxalase_3 PF13468.6 ORF81166 - 4.1e-22 79.1 0.0 4.9e-22 78.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain BRCT_2 PF16589.5 ORF78596 - 0.044 14.2 0.0 0.093 13.2 0.0 1.6 1 0 0 1 1 1 0 BRCT domain, a BRCA1 C-terminus domain SecD-TM1 PF13721.6 ORF76461 - 8.7 6.9 8.4 6.6 7.3 0.8 2.7 2 1 1 3 3 3 0 SecD export protein N-terminal TM region DUF4246 PF14033.6 ORF73876 - 2e-20 73.3 0.0 2.5e-20 73.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4246) Gln-synt_C PF00120.24 ORF73456 - 5.3e-15 55.3 0.0 3.7e-13 49.2 0.0 2.0 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain DUF802 PF05650.11 ORF73337 - 0.023 15.2 1.3 0.055 13.9 1.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF802) DAO_C PF16901.5 ORF73337 - 0.055 13.3 0.1 0.97 9.3 0.0 2.1 2 0 0 2 2 2 0 C-terminal domain of alpha-glycerophosphate oxidase AP2 PF00847.20 ORF72356 - 0.0026 18.0 0.1 0.0066 16.7 0.1 1.8 1 1 0 1 1 1 1 AP2 domain Pkinase PF00069.25 ORF69982 - 4.5e-40 137.7 0.1 5.5e-40 137.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF69982 - 7.7e-21 74.5 0.0 9.8e-21 74.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF69982 - 1.2e-06 28.1 0.1 0.00022 20.6 0.0 2.3 2 1 0 2 2 2 2 Kinase-like Haspin_kinase PF12330.8 ORF69982 - 0.00014 20.9 0.0 0.00019 20.5 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF69982 - 0.00058 18.8 0.0 0.001 17.9 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF69982 - 0.0038 16.6 0.0 0.0068 15.8 0.0 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF69982 - 0.016 14.8 0.1 2.3 7.8 0.0 2.1 1 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 ORF69982 - 0.017 14.7 0.0 0.035 13.7 0.0 1.4 1 0 0 1 1 1 0 RIO1 family APH PF01636.23 ORF69982 - 0.05 13.5 0.0 0.12 12.3 0.0 1.6 2 0 0 2 2 2 0 Phosphotransferase enzyme family BBL5 PF07289.11 ORF69982 - 0.076 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein ATP_bind_2 PF03668.15 ORF69961 - 0.035 13.4 0.0 0.047 13.0 0.0 1.2 1 0 0 1 1 1 0 P-loop ATPase protein family Rhodanese PF00581.20 ORF69961 - 0.075 13.6 0.0 0.14 12.7 0.0 1.4 1 1 0 1 1 1 0 Rhodanese-like domain adh_short PF00106.25 ORF69793 - 2.3e-14 53.3 0.0 4.4e-14 52.4 0.0 1.5 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF69793 - 2e-12 47.2 0.0 3.9e-12 46.2 0.0 1.5 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Herpes_U15 PF05613.11 ORF6857 - 0.058 14.1 0.5 0.058 14.1 0.5 1.6 2 0 0 2 2 2 0 Human herpesvirus U15 protein CoaE PF01121.20 ORF68545 - 1.2e-77 259.6 0.3 1.6e-77 259.2 0.3 1.1 1 0 0 1 1 1 1 Dephospho-CoA kinase AAA_33 PF13671.6 ORF68545 - 9.1e-06 25.9 0.4 0.00014 22.1 0.4 2.3 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 ORF68545 - 3e-05 24.3 0.7 0.00031 21.0 0.7 2.3 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 ORF68545 - 5.6e-05 23.6 0.0 0.00025 21.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF68545 - 6.1e-05 23.6 0.1 0.0003 21.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 ORF68545 - 6.2e-05 23.2 1.4 0.32 11.1 0.4 2.5 1 1 1 2 2 2 2 Shikimate kinase Cytidylate_kin2 PF13189.6 ORF68545 - 0.0038 17.4 1.0 0.018 15.2 1.0 2.1 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_22 PF13401.6 ORF68545 - 0.0084 16.4 0.3 0.07 13.4 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF68545 - 0.014 15.1 0.2 0.025 14.3 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ACT PF01842.25 ORF68545 - 0.032 14.0 1.6 0.11 12.3 0.4 2.4 2 1 1 3 3 3 0 ACT domain Thymidylate_kin PF02223.17 ORF68545 - 0.032 13.9 0.1 0.72 9.5 0.0 2.3 2 0 0 2 2 2 0 Thymidylate kinase Dynamin_N PF00350.23 ORF68545 - 0.035 14.2 0.1 0.044 13.9 0.1 1.6 1 1 0 1 1 1 0 Dynamin family PRK PF00485.18 ORF68545 - 0.037 13.8 1.0 0.99 9.1 0.1 2.1 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family ATPase PF06745.13 ORF68545 - 0.061 12.7 0.3 0.62 9.4 0.0 2.0 2 0 0 2 2 2 0 KaiC ABC_tran PF00005.27 ORF68545 - 0.061 13.8 1.2 0.11 13.0 1.2 1.8 1 1 0 1 1 1 0 ABC transporter CobU PF02283.16 ORF68545 - 0.099 12.2 0.7 2.2 7.8 0.1 2.2 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase APS_kinase PF01583.20 ORF68545 - 0.11 12.4 0.1 0.37 10.7 0.0 1.9 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_5 PF07728.14 ORF68545 - 0.14 12.2 1.5 6.5 6.7 0.1 2.5 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF68545 - 0.14 12.5 3.1 0.87 9.9 3.1 2.1 1 1 0 1 1 1 0 AAA ATPase domain dNK PF01712.19 ORF68545 - 0.15 11.9 0.4 0.73 9.7 0.0 2.0 2 1 0 2 2 2 0 Deoxynucleoside kinase Proton_antipo_M PF00361.20 ORF67350 - 2.8e-32 112.1 7.7 2.8e-32 112.1 7.7 1.5 1 1 1 2 2 2 1 Proton-conducting membrane transporter EI24 PF07264.11 ORF67350 - 0.42 10.8 10.9 0.97 9.7 0.5 2.2 1 1 1 2 2 2 0 Etoposide-induced protein 2.4 (EI24) AP2 PF00847.20 ORF66616 - 0.0026 18.0 0.1 0.0066 16.7 0.1 1.8 1 1 0 1 1 1 1 AP2 domain DDE_Tnp_IS1595 PF12762.7 ORF64209 - 0.0009 19.3 0.2 0.0017 18.4 0.2 1.6 1 1 0 1 1 1 1 ISXO2-like transposase domain DUF229 PF02995.17 ORF62302 - 3.6e-06 25.9 1.0 4.1e-05 22.4 1.0 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Ntox21 PF15526.6 ORF62302 - 1.1 9.6 3.9 20 5.6 0.1 3.1 3 0 0 3 3 3 0 Novel toxin 21 LysE PF01810.18 ORF6181 - 6.9e-51 172.5 14.0 7.9e-51 172.3 14.0 1.0 1 0 0 1 1 1 1 LysE type translocator LysE PF01810.18 ORF6176 - 8.3e-58 195.0 10.9 9.5e-58 194.8 10.9 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 ORF6176 - 0.00019 21.1 5.7 0.0012 18.6 5.7 2.2 1 1 0 1 1 1 1 Integral membrane protein TerC family DUF808 PF05661.12 ORF6176 - 0.01 14.9 0.1 0.019 14.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF808) Nitrate_red_gam PF02665.14 ORF6176 - 0.17 11.4 8.8 0.02 14.5 3.7 1.8 1 1 0 2 2 2 0 Nitrate reductase gamma subunit Ras PF00071.22 ORF61054 - 2.9e-62 209.0 1.1 3.4e-62 208.8 1.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF61054 - 4e-36 123.9 0.5 4e-36 123.9 0.5 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF61054 - 5.3e-21 74.8 0.1 6.9e-21 74.5 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF61054 - 2.4e-06 27.6 0.1 4.1e-06 26.9 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF61054 - 2.4e-06 27.1 0.4 2.9e-06 26.8 0.4 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF61054 - 2.3e-05 23.9 0.1 3.8e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF61054 - 3.1e-05 23.6 2.0 7.9e-05 22.3 0.5 2.2 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF61054 - 0.003 17.5 0.5 0.074 13.0 0.1 2.2 1 1 0 2 2 2 1 RsgA GTPase TniB PF05621.11 ORF61054 - 0.0084 15.5 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial TniB protein FeoB_N PF02421.18 ORF61054 - 0.013 15.1 0.1 0.18 11.4 0.1 2.0 1 1 0 1 1 1 0 Ferrous iron transport protein B SNF2_N PF00176.23 ORF61054 - 0.045 12.5 0.0 0.057 12.1 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain V-SNARE_C PF12352.8 ORF61024 - 7.9e-16 58.1 1.8 1.6e-15 57.1 1.8 1.6 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 ORF61024 - 0.0015 18.4 0.1 0.0025 17.7 0.1 1.4 1 1 0 1 1 1 1 Sec20 ORF6N PF10543.9 ORF61024 - 0.078 13.2 0.0 0.14 12.4 0.0 1.5 1 0 0 1 1 1 0 ORF6N domain SNARE PF05739.19 ORF61024 - 2.2 8.3 7.1 0.38 10.8 2.4 2.2 2 1 1 3 3 3 0 SNARE domain Ank_5 PF13857.6 ORF60756 - 0.048 14.0 0.2 0.17 12.3 0.1 2.0 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF60756 - 0.087 13.4 0.1 0.27 11.8 0.0 1.8 1 1 1 2 2 2 0 Ankyrin repeats (3 copies) Ras PF00071.22 ORF60612 - 1.1e-08 34.8 0.1 1.6e-08 34.3 0.1 1.2 1 0 0 1 1 1 1 Ras family MetallophosC PF16370.5 ORF60612 - 0.015 15.6 0.0 0.032 14.5 0.0 1.6 1 0 0 1 1 1 0 C terminal of Calcineurin-like phosphoesterase Tipalpha PF16753.5 ORF60612 - 0.068 13.0 0.1 0.096 12.5 0.1 1.3 1 0 0 1 1 1 0 TNF-alpha-Inducing protein of Helicobacter Asp PF00026.23 ORF56724 - 3.4e-14 53.0 0.2 4.3e-14 52.7 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF56724 - 1.8e-05 24.6 0.0 0.00027 20.8 0.0 2.2 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Ras PF00071.22 ORF55131 - 1.4e-64 216.6 0.4 1.7e-64 216.3 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF55131 - 2.8e-36 124.4 0.3 5e-36 123.6 0.0 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF55131 - 2.1e-18 66.4 0.1 2.7e-18 66.0 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF55131 - 1.5e-06 27.9 0.3 1e-05 25.2 0.1 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF55131 - 2.8e-06 27.3 0.5 0.018 15.0 0.1 2.2 1 1 1 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 ORF55131 - 3.6e-06 26.5 0.1 4.6e-06 26.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF55131 - 1.4e-05 25.2 0.0 3.9e-05 23.7 0.0 1.6 1 1 1 2 2 2 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF55131 - 7.4e-05 22.2 0.1 0.0001 21.8 0.1 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit DAP3 PF10236.9 ORF55131 - 0.0089 15.2 0.0 0.6 9.2 0.0 2.1 2 0 0 2 2 2 1 Mitochondrial ribosomal death-associated protein 3 AAA_22 PF13401.6 ORF55131 - 0.021 15.1 0.0 0.081 13.2 0.0 2.0 1 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF55131 - 0.042 14.2 0.0 0.063 13.6 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 ORF55131 - 0.05 14.1 0.0 0.076 13.5 0.0 1.5 1 1 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 ORF55131 - 0.11 12.3 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Ank_5 PF13857.6 ORF51167 - 0.048 14.0 0.2 0.17 12.3 0.1 2.0 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF51167 - 0.087 13.4 0.1 0.27 11.8 0.0 1.8 1 1 1 2 2 2 0 Ankyrin repeats (3 copies) RabGAP-TBC PF00566.18 ORF50740 - 5.9e-09 35.9 0.1 5.9e-09 35.9 0.1 2.3 2 1 0 2 2 2 1 Rab-GTPase-TBC domain Ndufs5 PF10200.9 ORF50740 - 0.13 12.5 0.4 0.13 12.5 0.4 1.8 2 0 0 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa ANAPC_CDC26 PF10471.9 ORF50740 - 1.4 9.8 7.1 0.13 13.1 1.2 2.1 2 1 0 2 2 2 0 Anaphase-promoting complex APC subunit CDC26 DUF667 PF05018.13 ORF49041 - 2.2e-91 304.6 1.0 2.5e-91 304.4 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) HMG14_17 PF01101.18 ORF43779 - 0.0026 18.7 15.3 0.0054 17.7 15.3 1.5 1 0 0 1 1 1 1 HMG14 and HMG17 Ribosomal_S9 PF00380.19 ORF42607 - 3.2e-31 108.4 0.7 4.6e-31 107.9 0.7 1.2 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Methyltransf_2 PF00891.18 ORF42607 - 0.16 11.2 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain Antimicrobial_3 PF08025.11 ORF42607 - 0.25 11.3 0.3 0.25 11.3 0.3 2.1 2 0 0 2 2 2 0 Spider antimicrobial peptide LCE PF14672.6 ORF41998 - 0.0018 18.8 20.4 1.9 9.1 0.8 4.3 1 1 3 4 4 4 4 Late cornified envelope CbiX PF01903.17 ORF41998 - 0.062 13.6 0.1 87 3.5 0.0 3.5 1 1 3 4 4 4 0 CbiX DUF1771 PF08590.10 ORF41998 - 0.11 12.9 0.2 43 4.6 0.2 2.7 1 1 3 4 4 4 0 Domain of unknown function (DUF1771) Abhydrolase_2 PF02230.16 ORF38507 - 8.7e-09 35.5 0.0 2.3e-08 34.1 0.0 1.7 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 ORF38507 - 0.0047 16.8 0.0 0.0055 16.6 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF38507 - 0.0075 16.9 0.5 0.018 15.6 0.3 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Pkinase PF00069.25 ORF35737 - 4.5e-40 137.7 0.1 5.5e-40 137.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF35737 - 7.7e-21 74.5 0.0 9.8e-21 74.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF35737 - 1.2e-06 28.1 0.1 0.00022 20.6 0.0 2.3 2 1 0 2 2 2 2 Kinase-like Haspin_kinase PF12330.8 ORF35737 - 0.00014 20.9 0.0 0.00019 20.5 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF35737 - 0.00058 18.8 0.0 0.001 17.9 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF35737 - 0.0038 16.6 0.0 0.0068 15.8 0.0 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF35737 - 0.016 14.8 0.1 2.3 7.8 0.0 2.1 1 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 ORF35737 - 0.017 14.7 0.0 0.035 13.7 0.0 1.4 1 0 0 1 1 1 0 RIO1 family APH PF01636.23 ORF35737 - 0.05 13.5 0.0 0.12 12.3 0.0 1.6 2 0 0 2 2 2 0 Phosphotransferase enzyme family BBL5 PF07289.11 ORF35737 - 0.076 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein RWP-RK PF02042.15 ORF34511 - 0.21 11.6 2.8 0.85 9.7 2.3 2.0 2 0 0 2 2 2 0 RWP-RK domain fn3 PF00041.21 ORF33694 - 0.00045 20.5 4.7 0.00062 20.1 1.5 2.5 3 0 0 3 3 3 1 Fibronectin type III domain ER PF01133.17 ORF31077 - 0.0048 16.9 0.1 0.011 15.8 0.1 1.6 1 1 0 1 1 1 1 Enhancer of rudimentary ERGIC_N PF13850.6 ORF31077 - 0.0079 16.5 0.1 0.013 15.8 0.1 1.4 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ank_2 PF12796.7 ORF29719 - 6.8e-43 145.2 4.5 1.4e-14 54.4 0.1 4.0 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF29719 - 1.2e-29 99.1 0.0 0.00049 20.3 0.0 6.0 6 0 0 6 6 6 5 Ankyrin repeat Ank_4 PF13637.6 ORF29719 - 2.9e-28 97.8 0.4 1.8e-08 34.8 0.0 3.5 3 1 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF29719 - 5.9e-26 89.7 0.3 0.00023 21.4 0.0 6.0 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF29719 - 6.8e-23 80.4 3.0 9.2e-05 22.7 0.0 5.6 1 1 5 6 6 6 5 Ankyrin repeats (many copies) DUF2170 PF09938.9 ORF29719 - 0.0035 17.0 0.0 7.1 6.3 0.0 3.3 1 1 0 3 3 3 1 Uncharacterized protein conserved in bacteria (DUF2170) YfmQ PF10787.9 ORF29719 - 0.0053 16.5 0.0 56 3.5 0.0 4.7 1 1 5 6 6 6 0 Uncharacterised protein from bacillus cereus group Acyl-CoA_dh_2 PF08028.11 ORF29719 - 0.062 13.6 3.5 9.1 6.6 0.4 3.4 1 1 3 4 4 4 0 Acyl-CoA dehydrogenase, C-terminal domain AA_permease_2 PF13520.6 ORF2898 - 1.6e-09 37.1 12.3 3.1e-09 36.2 11.9 1.6 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.21 ORF2898 - 2.7e-07 29.5 7.7 3e-07 29.4 7.7 1.2 1 0 0 1 1 1 1 Amino acid permease DUF3043 PF11241.8 ORF2898 - 0.88 9.6 4.2 0.57 10.2 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3043) EF-hand_7 PF13499.6 ORF28553 - 0.02 15.4 0.0 0.04 14.4 0.0 1.6 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF28553 - 0.02 14.4 0.0 0.048 13.2 0.0 1.6 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF28553 - 0.032 14.2 0.1 0.12 12.4 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 ORF28553 - 0.045 13.3 0.0 0.13 11.8 0.0 1.8 1 0 0 1 1 1 0 EF hand Takusan PF04822.13 ORF28553 - 0.2 11.6 0.0 0.7 9.8 0.0 1.8 2 0 0 2 2 2 0 Takusan Asp PF00026.23 ORF27354 - 3.4e-14 53.0 0.2 4.3e-14 52.7 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF27354 - 1.8e-05 24.6 0.0 0.00027 20.8 0.0 2.2 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal DUF2220 PF09983.9 ORF25926 - 0.16 11.3 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria C-term(DUF2220) Pyr_redox_2 PF07992.14 ORF23445 - 1.2e-15 57.6 0.4 1.5e-15 57.3 0.4 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 ORF23445 - 2.5e-06 27.9 0.0 6.4e-06 26.6 0.0 1.7 2 0 0 2 2 2 1 Reductase C-terminal Kelch_1 PF01344.25 ORF22785 - 2.7e-47 158.1 3.4 5.2e-13 48.3 0.2 4.1 4 0 0 4 4 4 4 Kelch motif Kelch_6 PF13964.6 ORF22785 - 1e-28 98.6 0.0 8.5e-08 32.2 0.0 4.1 3 1 1 4 4 4 4 Kelch motif Kelch_3 PF13415.6 ORF22785 - 6.7e-18 64.5 2.8 8.9e-05 22.7 0.2 4.1 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF22785 - 7.8e-14 51.4 0.0 0.00019 21.4 0.0 3.8 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF22785 - 1.5e-08 34.3 3.0 0.0063 16.4 0.1 4.3 4 0 0 4 4 4 3 Kelch motif Kelch_5 PF13854.6 ORF22785 - 6.9e-05 22.7 11.1 0.79 9.8 0.3 4.7 4 1 1 5 5 5 4 Kelch motif YjbE PF11106.8 ORF22785 - 0.0081 16.3 7.4 0.092 13.0 0.2 3.3 3 0 0 3 3 3 1 Exopolysaccharide production protein YjbE TTL PF03133.15 ORF22075 - 1.1e-47 162.6 0.6 1.3e-47 162.4 0.6 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF22075 - 9.8e-08 31.6 0.4 0.0096 15.2 0.0 2.1 1 1 1 2 2 2 2 YheC/D like ATP-grasp DLIC PF05783.11 ORF21036 - 3.3e-12 46.0 0.2 4.5e-12 45.6 0.2 1.2 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) Roc PF08477.13 ORF21036 - 4.2e-10 39.9 0.1 1.1e-09 38.6 0.0 1.6 2 0 0 2 2 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF21036 - 8.9e-08 31.9 0.0 8.4e-07 28.7 0.1 2.0 2 0 0 2 2 2 1 Ras family Arf PF00025.21 ORF21036 - 8.9e-06 25.3 0.3 3e-05 23.6 0.2 1.7 1 1 1 2 2 2 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF21036 - 9.3e-06 25.7 0.1 1.7e-05 24.9 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 ORF21036 - 2e-05 24.9 0.0 3.1e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF21036 - 5e-05 23.8 0.2 7.1e-05 23.3 0.2 1.4 1 1 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF21036 - 9.3e-05 22.1 0.0 0.00023 20.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF21036 - 0.00063 19.7 0.7 0.0017 18.3 0.1 2.0 3 0 0 3 3 2 1 RsgA GTPase AAA_16 PF13191.6 ORF21036 - 0.00065 20.1 0.4 0.0016 18.8 0.4 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 ORF21036 - 0.0013 18.3 0.1 0.0024 17.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region Septin PF00735.18 ORF21036 - 0.0016 17.8 0.1 0.0024 17.2 0.1 1.3 1 0 0 1 1 1 1 Septin AAA_15 PF13175.6 ORF21036 - 0.0029 17.4 0.2 0.0044 16.8 0.2 1.2 1 0 0 1 1 1 1 AAA ATPase domain SRPRB PF09439.10 ORF21036 - 0.0046 16.4 0.8 0.015 14.7 0.2 1.9 1 1 1 2 2 2 1 Signal recognition particle receptor beta subunit Sigma54_activat PF00158.26 ORF21036 - 0.0047 16.6 0.1 0.0072 16.0 0.1 1.3 1 0 0 1 1 1 1 Sigma-54 interaction domain DUF87 PF01935.17 ORF21036 - 0.0061 16.7 1.0 0.034 14.2 1.0 1.9 1 1 0 1 1 1 1 Helicase HerA, central domain AAA_24 PF13479.6 ORF21036 - 0.007 16.1 0.1 0.011 15.5 0.1 1.5 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 ORF21036 - 0.01 15.3 0.2 0.017 14.5 0.0 1.5 2 0 0 2 2 1 0 RecF/RecN/SMC N terminal domain AAA_14 PF13173.6 ORF21036 - 0.011 15.7 0.1 0.018 15.0 0.1 1.5 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF21036 - 0.012 15.5 0.1 0.025 14.5 0.1 1.5 1 1 0 1 1 1 0 NACHT domain PduV-EutP PF10662.9 ORF21036 - 0.012 15.4 0.2 0.031 14.0 0.2 1.9 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Ploopntkinase3 PF18751.1 ORF21036 - 0.016 15.1 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_23 PF13476.6 ORF21036 - 0.019 15.4 1.0 0.03 14.8 1.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF21036 - 0.021 14.4 0.0 0.075 12.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain CLP1_P PF16575.5 ORF21036 - 0.025 14.4 0.3 0.049 13.4 0.0 1.6 2 0 0 2 2 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_30 PF13604.6 ORF21036 - 0.03 14.0 0.1 0.054 13.2 0.1 1.4 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 ORF21036 - 0.031 13.6 0.0 0.052 12.9 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Zeta_toxin PF06414.12 ORF21036 - 0.033 13.5 0.4 0.066 12.5 0.1 1.6 2 0 0 2 2 2 0 Zeta toxin YfdX PF10938.8 ORF21036 - 0.042 13.8 0.2 0.086 12.8 0.2 1.5 1 0 0 1 1 1 0 YfdX protein DUF815 PF05673.13 ORF21036 - 0.047 12.8 0.1 0.086 12.0 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_28 PF13521.6 ORF21036 - 0.051 13.8 0.2 0.16 12.2 0.2 2.0 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF21036 - 0.06 13.1 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DAP3 PF10236.9 ORF21036 - 0.075 12.2 0.5 0.18 10.9 0.1 1.7 2 1 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AAA PF00004.29 ORF21036 - 0.079 13.4 0.5 0.16 12.4 0.5 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 ORF21036 - 0.12 12.7 0.2 0.41 11.0 0.1 2.0 2 0 0 2 2 2 0 RNA helicase Rad17 PF03215.15 ORF21036 - 0.12 12.2 0.2 0.26 11.2 0.1 1.6 1 1 1 2 2 2 0 Rad17 P-loop domain ATPase_2 PF01637.18 ORF21036 - 0.13 12.2 0.8 0.25 11.2 0.8 1.7 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea T2SSE PF00437.20 ORF21036 - 0.18 10.9 0.0 0.28 10.2 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein ER_lumen_recept PF00810.18 ORF19312 - 7.2e-22 78.8 0.5 7.2e-22 78.8 0.5 2.0 2 0 0 2 2 2 1 ER lumen protein retaining receptor AA_permease_2 PF13520.6 ORF19312 - 0.036 12.9 10.6 0.014 14.3 8.1 1.5 1 1 0 1 1 1 0 Amino acid permease BA14K PF07886.11 ORF19312 - 0.089 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 BA14K-like protein SPO11_like PF03533.14 ORF18331 - 0.0037 17.3 0.2 0.0078 16.3 0.2 1.5 1 0 0 1 1 1 1 SPO11 homologue Gln-synt_C PF00120.24 ORF17978 - 5.3e-15 55.3 0.0 3.7e-13 49.2 0.0 2.0 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain SpoIIE PF07228.12 ORF17662 - 2.5e-14 53.6 0.0 3.4e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) PP2C PF00481.21 ORF17662 - 4.2e-09 36.4 0.1 0.00022 21.0 0.0 2.1 2 0 0 2 2 2 2 Protein phosphatase 2C PP2C_2 PF13672.6 ORF17662 - 0.00011 21.9 0.0 0.00025 20.8 0.0 1.5 1 1 0 1 1 1 1 Protein phosphatase 2C COX5B PF01215.19 ORF15889 - 5e-12 45.6 0.0 8.3e-12 44.9 0.0 1.3 1 0 0 1 1 1 1 Cytochrome c oxidase subunit Vb DUF3586 PF12131.8 ORF13652 - 0.17 12.1 15.9 1.1 9.6 5.8 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3586) NOT2_3_5 PF04153.18 ORF12613 - 2.8e-36 124.5 10.4 3.6e-36 124.1 10.4 1.1 1 0 0 1 1 1 1 NOT2 / NOT3 / NOT5 family DEC-1_N PF04625.13 ORF12613 - 5.5 5.9 15.3 6.3 5.7 15.3 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Pkinase PF00069.25 ORF1194 - 4.5e-40 137.7 0.1 5.5e-40 137.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF1194 - 7.7e-21 74.5 0.0 9.8e-21 74.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF1194 - 1.2e-06 28.1 0.1 0.00022 20.6 0.0 2.3 2 1 0 2 2 2 2 Kinase-like Haspin_kinase PF12330.8 ORF1194 - 0.00014 20.9 0.0 0.00019 20.5 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF1194 - 0.00058 18.8 0.0 0.001 17.9 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF1194 - 0.0038 16.6 0.0 0.0068 15.8 0.0 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF1194 - 0.016 14.8 0.1 2.3 7.8 0.0 2.1 1 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 ORF1194 - 0.017 14.7 0.0 0.035 13.7 0.0 1.4 1 0 0 1 1 1 0 RIO1 family APH PF01636.23 ORF1194 - 0.05 13.5 0.0 0.12 12.3 0.0 1.6 2 0 0 2 2 2 0 Phosphotransferase enzyme family BBL5 PF07289.11 ORF1194 - 0.076 12.0 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein Methyltransf_19 PF04672.12 ORF11672 - 0.012 15.1 0.1 0.02 14.4 0.1 1.3 1 0 0 1 1 1 0 S-adenosyl methyltransferase CorA PF01544.18 ORF11672 - 0.017 14.5 4.2 0.022 14.1 4.2 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein HAUS2 PF15003.6 ORF11672 - 0.018 14.8 9.0 0.028 14.2 8.3 1.6 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 2 Exonuc_VII_L PF02601.15 ORF11672 - 0.045 13.3 8.2 0.055 13.0 8.2 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3603 PF12227.8 ORF11672 - 0.29 10.4 5.1 0.49 9.7 5.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3603) FAM76 PF16046.5 ORF11672 - 0.65 9.3 8.3 0.9 8.8 8.3 1.3 1 1 0 1 1 1 0 FAM76 protein DUF3533 PF12051.8 ORF11672 - 0.67 8.8 1.8 0.76 8.6 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) V_ATPase_I PF01496.19 ORF11672 - 0.87 7.4 4.9 1.1 7.1 4.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HIP1_clath_bdg PF16515.5 ORF11672 - 9.3 6.9 20.3 8.2 7.1 13.0 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Ank_2 PF12796.7 ORF111526 - 1.8e-48 163.0 1.5 5.7e-14 52.5 0.0 3.1 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF111526 - 7.9e-26 90.1 0.1 4.9e-09 36.6 0.0 4.2 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF111526 - 1.2e-23 80.6 0.1 0.00032 20.9 0.0 5.9 7 0 0 7 7 7 4 Ankyrin repeat Ank_5 PF13857.6 ORF111526 - 8.7e-23 80.1 1.2 1.8e-07 31.3 0.1 5.3 1 1 5 6 6 6 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF111526 - 7.9e-19 67.2 0.4 0.0023 18.3 0.0 5.8 6 0 0 6 6 6 4 Ankyrin repeat DNA_pol_A_exo1 PF01612.20 ORF111180 - 4e-10 39.7 0.1 6.3e-10 39.0 0.1 1.2 1 0 0 1 1 1 1 3'-5' exonuclease Bromodomain PF00439.25 ORF111037 - 0.16 12.0 0.0 0.28 11.3 0.0 1.3 1 0 0 1 1 1 0 Bromodomain Hid1 PF12722.7 ORF106182 - 9.2 4.2 12.8 9.9 4.1 12.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF4100 PF13352.6 ORF102642 - 0.012 15.4 0.1 0.017 14.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) FHA PF00498.26 ORF102091 - 2.3e-11 43.9 1.9 2e-10 40.9 0.2 2.7 3 0 0 3 3 3 1 FHA domain Yop-YscD_cpl PF16697.5 ORF102091 - 3.7e-06 27.1 0.1 7.7e-06 26.1 0.1 1.6 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Ribosomal_S4 PF00163.19 ORF100870 - 1.2e-32 112.6 3.0 1.8e-32 112.1 2.1 1.7 2 0 0 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain S4 PF01479.25 ORF100870 - 4.7e-19 67.8 0.2 9.7e-19 66.8 0.2 1.6 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 ORF100870 - 0.01 15.6 0.1 0.021 14.6 0.1 1.5 1 0 0 1 1 1 0 S4 domain TyrRSs_C PF16714.5 ORF100870 - 0.11 12.4 0.1 0.22 11.4 0.1 1.5 1 0 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain AAA_12 PF13087.6 NODE_35229_length_613_cov_2.240484_g28222_i0reverse_frame_1 - 8.4e-28 97.4 0.0 1.2e-27 96.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 NODE_35229_length_613_cov_2.240484_g28222_i0reverse_frame_1 - 0.0028 17.5 0.1 0.0044 16.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain Bax1-I PF01027.20 NODE_35227_length_613_cov_2.536332_g28220_i0reverse_frame_1 - 9.5e-16 58.2 23.4 1.2e-15 57.9 23.4 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 NODE_35227_length_613_cov_2.536332_g28220_i0reverse_frame_1 - 8.6e-05 22.2 5.2 9.1e-05 22.1 5.2 1.1 1 0 0 1 1 1 1 Bax inhibitor 1 like Cation_ATPase_C PF00689.21 NODE_35227_length_613_cov_2.536332_g28220_i0reverse_frame_1 - 0.0042 16.8 9.2 0.0056 16.4 9.2 1.2 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus NDUF_B4 PF07225.12 NODE_35227_length_613_cov_2.536332_g28220_i0reverse_frame_1 - 0.2 11.6 1.3 0.22 11.4 0.2 1.7 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) TFIIF_alpha PF05793.12 NODE_35224_length_613_cov_54.548443_g28217_i0reverse_frame_1 - 2.3 6.7 40.7 2.8 6.4 40.7 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) ETRAMP PF09716.10 NODE_35218_length_613_cov_69.617647_g28211_i0reverse_frame_1 - 0.04 14.0 3.6 0.073 13.1 3.6 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) AP3D1 PF06375.11 NODE_35218_length_613_cov_69.617647_g28211_i0reverse_frame_1 - 1.6 8.9 12.9 2.3 8.4 12.9 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Macoilin PF09726.9 NODE_35173_length_614_cov_3.537133_g28171_i0reverse_frame_1 - 0.56 8.7 0.6 0.74 8.3 0.6 1.0 1 0 0 1 1 1 0 Macoilin family MORN PF02493.20 NODE_35173_length_614_cov_3.537133_g28171_i0forward_frame_1 - 4.7e-13 48.2 16.4 8.2e-05 22.3 0.8 3.6 3 0 0 3 3 3 3 MORN repeat Methyltransf_31 PF13847.6 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 4.9e-09 36.1 0.0 6.3e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 7.9e-09 36.1 0.0 1.2e-08 35.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 2.7e-06 27.0 0.0 3.3e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.12 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 1.2e-05 25.9 0.0 1.7e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 7.7e-05 22.6 0.0 8.1e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 0.0023 18.6 0.0 0.0033 18.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 0.011 15.4 0.0 0.017 14.8 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 CMAS PF02353.20 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 0.014 14.7 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase FtsJ PF01728.19 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 0.02 15.0 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase PrmA PF06325.13 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 0.043 13.2 0.0 0.058 12.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 0.12 11.8 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_18 PF12847.7 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 0.17 11.8 0.0 0.27 11.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 NODE_35159_length_614_cov_87.856649_g28157_i0reverse_frame_1 - 0.2 11.2 0.0 0.28 10.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain DPM3 PF08285.11 NODE_35158_length_614_cov_88.371330_g28156_i0reverse_frame_1 - 2 8.7 7.5 0.29 11.4 2.5 2.0 1 1 1 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) H2O2_YaaD PF03883.14 NODE_35145_length_614_cov_157.996546_g28143_i0forward_frame_1 - 0.027 14.0 0.0 0.037 13.5 0.0 1.2 1 0 0 1 1 1 0 Peroxide stress protein YaaA # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks96.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks96.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks96.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks96.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:21:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Sel_put PF04328.13 NODE_35119_length_615_cov_73.674138_g28122_i0forward_frame_1 - 2.6 8.1 24.4 1.9 8.6 3.4 3.6 3 0 0 3 3 3 0 Selenoprotein, putative Apocytochr_F_C PF01333.19 NODE_35082_length_615_cov_5392.539655_g28090_i0reverse_frame_1 - 3.4e-35 120.6 0.1 4.7e-35 120.2 0.1 1.2 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF5006 PF16397.5 NODE_35082_length_615_cov_5392.539655_g28090_i0reverse_frame_1 - 0.00041 19.6 0.1 0.00056 19.2 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5006) RnfC_N PF13375.6 NODE_35082_length_615_cov_5392.539655_g28090_i0reverse_frame_1 - 0.085 12.8 0.3 3.4 7.7 0.1 2.4 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain DUF5547 PF17701.1 NODE_35078_length_615_cov_43827.687931_g28089_i0reverse_frame_1 - 0.022 14.7 0.0 0.045 13.6 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Trypsin PF00089.26 NODE_35075_length_616_cov_2.296041_g28086_i0forward_frame_2 - 5.7e-12 45.9 0.0 1.7e-11 44.4 0.0 1.7 1 1 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 NODE_35075_length_616_cov_2.296041_g28086_i0forward_frame_2 - 3.1e-08 34.6 0.0 4.4e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Trypsin-like peptidase domain Peptidase_C4 PF00863.19 NODE_35075_length_616_cov_2.296041_g28086_i0forward_frame_2 - 0.027 13.8 0.0 0.3 10.4 0.0 2.0 2 0 0 2 2 2 0 Peptidase family C4 EamA PF00892.20 NODE_35074_length_616_cov_2.507745_g28085_i0forward_frame_3 - 3.5e-08 33.7 14.3 4.9e-08 33.2 14.3 1.2 1 0 0 1 1 1 1 EamA-like transporter family 7TMR-DISM_7TM PF07695.11 NODE_35074_length_616_cov_2.507745_g28085_i0forward_frame_3 - 0.22 11.4 10.2 0.054 13.4 7.2 1.4 2 0 0 2 2 2 0 7TM diverse intracellular signalling Neur_chan_memb PF02932.16 NODE_35066_length_616_cov_41.678141_g28078_i0reverse_frame_2 - 0.003 17.6 3.6 0.0035 17.5 3.6 1.1 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel transmembrane region CCSAP PF15748.5 NODE_35066_length_616_cov_41.678141_g28078_i0reverse_frame_2 - 0.72 10.0 12.5 1.1 9.4 12.5 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated WDCP PF15390.6 NODE_35066_length_616_cov_41.678141_g28078_i0reverse_frame_2 - 2.1 6.6 7.1 2.4 6.4 7.1 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family RCC1_2 PF13540.6 NODE_35051_length_616_cov_104.858864_g28063_i0forward_frame_3 - 1.2e-08 34.5 8.9 0.051 13.4 0.1 4.7 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_35051_length_616_cov_104.858864_g28063_i0forward_frame_3 - 0.0032 17.6 0.2 2.2 8.4 0.0 3.4 3 1 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 DUF4984 PF16372.5 NODE_35051_length_616_cov_104.858864_g28063_i0forward_frame_3 - 0.037 14.0 0.2 12 5.8 0.0 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4984) TrmO PF01980.16 NODE_35044_length_616_cov_190.290878_g28057_i0forward_frame_3 - 0.14 12.4 0.1 0.37 11.0 0.0 1.7 1 1 0 1 1 1 0 tRNA-methyltransferase O Myticin-prepro PF10690.9 NODE_35018_length_617_cov_85.140893_g28032_i0forward_frame_2 - 0.069 13.4 3.6 0.085 13.1 2.7 1.6 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel DUF755 PF05501.11 NODE_35012_length_617_cov_145.226804_g28026_i0forward_frame_2 - 1 9.6 14.0 0.2 12.0 10.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF755) TetR PF13972.6 NODE_35007_length_617_cov_204.297251_g28021_i0reverse_frame_2 - 0.074 12.8 1.1 0.11 12.2 1.1 1.4 1 0 0 1 1 1 0 Bacterial transcriptional repressor SLATT_4 PF18186.1 NODE_34979_length_618_cov_1.929674_g27996_i0reverse_frame_3 - 0.038 13.6 4.7 0.056 13.1 2.9 1.9 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 4 Clathrin_H_link PF13838.6 NODE_34979_length_618_cov_1.929674_g27996_i0reverse_frame_2 - 0.034 14.1 1.3 0.063 13.2 0.1 2.0 2 0 0 2 2 2 0 Clathrin-H-link DUF3454 PF11936.8 NODE_34979_length_618_cov_1.929674_g27996_i0reverse_frame_2 - 0.13 12.7 0.4 0.41 11.1 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3454) EamA PF00892.20 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 1.3e-09 38.4 4.3 8e-08 32.5 2.9 2.3 2 0 0 2 2 2 1 EamA-like transporter family CRT-like PF08627.10 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 2.1e-09 36.8 1.4 2.7e-09 36.4 1.4 1.1 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like Nuc_sug_transp PF04142.15 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 4e-09 36.1 0.2 4.4e-09 35.9 0.2 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter TMEM234 PF10639.9 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 9e-06 25.7 1.4 2.8e-05 24.1 0.6 2.0 2 0 0 2 2 2 1 Putative transmembrane family 234 PUNUT PF16913.5 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 4.8e-05 22.7 0.3 6.2e-05 22.4 0.3 1.1 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport SLC35F PF06027.12 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 0.0001 22.0 2.8 0.00014 21.5 2.8 1.1 1 0 0 1 1 1 1 Solute carrier family 35 Mg_trans_NIPA PF05653.14 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 0.00038 19.7 1.0 0.00038 19.7 1.0 1.5 1 1 1 2 2 2 1 Magnesium transporter NIPA UAA PF08449.11 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 0.00046 19.5 1.4 0.00062 19.1 1.4 1.2 1 0 0 1 1 1 1 UAA transporter family TPT PF03151.16 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 0.0018 17.7 0.3 0.0023 17.3 0.3 1.2 1 0 0 1 1 1 1 Triose-phosphate Transporter family DUF3099 PF11298.8 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 0.012 15.7 0.0 0.024 14.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) Multi_Drug_Res PF00893.19 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 0.029 15.0 1.4 0.042 14.5 0.3 1.7 2 0 0 2 2 2 0 Small Multidrug Resistance protein Wzy_C PF04932.15 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 0.44 10.2 4.0 0.67 9.6 4.0 1.3 1 0 0 1 1 1 0 O-Antigen ligase DUF805 PF05656.14 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 0.48 10.9 2.5 0.91 10.0 2.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF805) DUF202 PF02656.15 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 1.4 9.4 5.9 6.7 7.2 0.5 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF202) TrbC PF04956.13 NODE_34978_length_618_cov_2.468268_g27995_i0forward_frame_3 - 4.3 7.6 8.6 4.1 7.7 5.8 2.1 1 1 1 2 2 2 0 TrbC/VIRB2 family Methyltransf_24 PF13578.6 NODE_34973_length_618_cov_47.459691_g27990_i0forward_frame_2 - 3.7e-08 34.3 0.0 5.6e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TylF PF05711.11 NODE_34973_length_618_cov_47.459691_g27990_i0forward_frame_2 - 1.2e-05 24.7 0.0 0.00012 21.4 0.0 2.2 1 1 0 1 1 1 1 Macrocin-O-methyltransferase (TylF) POLO_box PF00659.18 NODE_34971_length_618_cov_58.428816_g27668_i1reverse_frame_3 - 1.2e-12 47.9 0.6 1.9e-12 47.2 0.6 1.3 1 0 0 1 1 1 1 POLO box duplicated region DUF4431 PF14485.6 NODE_34971_length_618_cov_58.428816_g27668_i1forward_frame_3 - 0.17 11.7 0.2 0.66 9.8 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) T4-Gluco-transf PF09198.10 NODE_34971_length_618_cov_58.428816_g27668_i1forward_frame_2 - 0.28 10.8 0.2 0.28 10.8 0.2 2.2 2 0 0 2 2 2 0 Bacteriophage T4 beta-glucosyltransferase Chitin_synth_1 PF01644.17 NODE_34962_length_618_cov_90.751286_g27980_i0forward_frame_2 - 5e-06 26.6 0.3 9.2e-06 25.7 0.3 1.4 1 0 0 1 1 1 1 Chitin synthase Cadherin_2 PF08266.12 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 0.00014 21.7 0.8 0.00034 20.4 0.8 1.6 1 0 0 1 1 1 1 Cadherin-like OmpH PF03938.14 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 0.0077 16.6 10.5 0.0077 16.6 10.5 2.9 1 1 2 3 3 3 1 Outer membrane protein (OmpH-like) Nore1-SARAH PF16517.5 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 0.87 9.5 6.9 6.6 6.7 0.1 3.1 3 0 0 3 3 3 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Exonuc_VII_L PF02601.15 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 1.7 8.1 12.0 2.2 7.8 12.0 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Hemagglutinin PF00509.18 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 1.7 6.9 6.1 2.2 6.6 6.1 1.1 1 0 0 1 1 1 0 Haemagglutinin DUF4407 PF14362.6 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 5.5 6.3 15.4 3 7.1 13.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF423 PF04241.15 NODE_34929_length_618_cov_38678.564322_g27955_i0forward_frame_3 - 0.41 10.9 3.5 0.6 10.3 2.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF423) LMF1 PF06762.14 ORF9687 - 1.5e-14 54.0 0.4 1.8e-14 53.7 0.4 1.0 1 0 0 1 1 1 1 Lipase maturation factor BTB PF00651.31 ORF9624 - 1.6e-22 79.9 2.6 9.4e-22 77.4 0.6 2.1 1 1 1 2 2 2 2 BTB/POZ domain MG4 PF17789.1 ORF94759 - 0.07 13.3 2.6 0.11 12.6 0.2 2.3 2 1 1 3 3 3 0 Macroglobulin domain MG4 FBPase PF00316.20 ORF94759 - 1.8 8.0 9.8 0.85 9.1 2.2 2.2 1 1 1 2 2 2 0 Fructose-1-6-bisphosphatase, N-terminal domain GST_C_3 PF14497.6 ORF93171 - 4.8e-14 52.4 0.4 7.3e-14 51.8 0.4 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF93171 - 2e-10 40.9 0.0 3.8e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF93171 - 2.2e-05 24.6 0.2 3.5e-05 23.9 0.2 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF93171 - 0.03 14.7 0.0 0.1 13.1 0.0 1.9 1 1 0 1 1 1 0 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF93171 - 0.16 12.0 0.0 0.35 10.9 0.0 1.7 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain His_Phos_1 PF00300.22 ORF93086 - 0.0046 16.7 0.0 0.33 10.6 0.0 2.1 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) CS PF04969.16 ORF92974 - 0.001 20.0 0.0 0.0031 18.5 0.0 1.8 1 1 0 1 1 1 1 CS domain ATP_bind_1 PF03029.17 ORF92762 - 8.4e-31 107.6 0.4 8.4e-31 107.6 0.4 1.4 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 ORF92762 - 0.00053 19.6 0.0 0.00053 19.6 0.0 1.5 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF92762 - 0.057 13.3 0.2 0.11 12.3 0.0 1.5 1 1 0 1 1 1 0 RsgA GTPase DUF3811 PF11656.8 ORF92762 - 0.071 13.5 1.9 0.12 12.8 1.9 1.3 1 0 0 1 1 1 0 YjbD family (DUF3811) DUF2951 PF11166.8 ORF92762 - 2.2 8.6 6.4 7.3 6.9 5.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) TAXi_N PF14543.6 ORF91940 - 0.73 10.1 12.2 0.34 11.1 8.1 2.0 1 1 1 2 2 2 0 Xylanase inhibitor N-terminal DUF3362 PF11842.8 ORF9087 - 4e-46 157.1 1.5 5.6e-46 156.6 1.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3362) Radical_SAM PF04055.21 ORF9087 - 0.052 13.9 0.0 0.48 10.8 0.0 2.0 2 0 0 2 2 2 0 Radical SAM superfamily NPL PF17800.1 ORF89717 - 6.9e-08 33.0 1.0 1.5e-07 31.9 0.0 1.9 2 0 0 2 2 2 1 Nucleoplasmin-like domain DUF1137 PF06587.11 ORF89717 - 0.25 11.4 0.9 10 6.2 0.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1137) Hydrolase_4 PF12146.8 ORF89703 - 1.5e-06 27.7 0.0 0.0034 16.7 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF89703 - 1.2e-05 25.1 0.3 0.035 13.7 0.5 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF89703 - 4.7e-05 24.1 0.4 0.01 16.5 0.7 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 ORF89703 - 0.0014 18.4 0.0 0.0045 16.8 0.0 1.8 2 1 0 2 2 2 1 Alpha/beta hydrolase family PhoPQ_related PF10142.9 ORF89703 - 0.012 14.3 0.0 0.016 13.9 0.0 1.1 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein ABC_tran PF00005.27 ORF87967 - 1.9e-32 112.6 0.0 2.7e-32 112.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF87967 - 3.5e-10 40.2 0.6 0.00058 19.8 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF87967 - 1.9e-05 24.2 0.0 0.0041 16.6 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain DUF3584 PF12128.8 ORF87967 - 0.00063 17.4 0.2 0.00081 17.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) AAA_30 PF13604.6 ORF87967 - 0.0021 17.8 0.6 0.03 14.0 0.6 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF87967 - 0.0036 17.0 0.2 0.0073 16.0 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF87967 - 0.0044 17.6 0.3 0.0066 17.0 0.3 1.2 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 ORF87967 - 0.03 14.6 0.0 0.078 13.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 ORF87967 - 0.031 12.9 0.0 0.041 12.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 ORF87967 - 0.038 13.6 0.1 0.061 12.9 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 ORF87967 - 0.04 14.3 0.2 0.063 13.7 0.2 1.7 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF87967 - 0.066 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_18 PF13238.6 ORF87967 - 0.14 12.7 0.2 1 9.9 0.1 2.0 1 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 ORF87967 - 0.15 12.2 0.3 0.77 9.9 0.3 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase NB-ARC PF00931.22 ORF87967 - 0.17 11.1 0.5 2.3 7.3 0.1 2.0 2 0 0 2 2 2 0 NB-ARC domain AAA_15 PF13175.6 ORF87967 - 0.21 11.3 0.0 1.6 8.3 0.0 2.2 2 1 1 3 3 3 0 AAA ATPase domain PARP PF00644.20 ORF8430 - 0.00082 19.0 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Chloroa_b-bind PF00504.21 ORF84127 - 3.9e-35 121.8 1.1 1.8e-34 119.6 0.1 1.9 2 0 0 2 2 2 1 Chlorophyll A-B binding protein Neugrin PF06413.11 ORF83681 - 0.023 14.7 0.4 0.11 12.4 0.0 1.9 2 0 0 2 2 2 0 Neugrin DUF5320 PF17253.2 ORF83681 - 0.025 15.6 0.0 0.051 14.6 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5320) DivIC PF04977.15 ORF83681 - 0.18 11.6 1.2 0.32 10.8 1.2 1.3 1 0 0 1 1 1 0 Septum formation initiator Nup54_57_C PF18570.1 ORF83681 - 0.54 9.9 5.1 1.3 8.7 0.6 2.8 2 1 1 3 3 3 0 NUP57/Nup54 C-terminal domain Aldose_epim PF01263.20 ORF82243 - 7.7e-29 100.9 0.0 9.2e-29 100.7 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase RRM_1 PF00076.22 ORF81624 - 4.7e-09 35.9 0.5 9.8e-09 34.9 0.2 1.8 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 ORF81624 - 0.00013 21.9 0.0 0.00022 21.1 0.0 1.3 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RRM_3 PF08777.11 ORF81624 - 0.00057 19.9 0.1 0.0012 18.9 0.1 1.6 1 0 0 1 1 1 1 RNA binding motif RNA_bind PF08675.11 ORF81624 - 0.018 15.0 0.0 0.033 14.2 0.0 1.4 1 0 0 1 1 1 0 RNA binding domain Viral_RdRp_C PF17501.2 ORF81548 - 0.14 12.6 1.7 0.19 12.2 0.2 1.9 2 1 0 2 2 2 0 Viral RNA-directed RNA polymerase UPF0242 PF06785.11 ORF81548 - 5.3 7.1 15.1 8.7 6.4 15.0 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4064 PF13273.6 ORF80948 - 0.0025 18.1 2.6 0.0095 16.2 0.7 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF4064) DUF4386 PF14329.6 ORF80948 - 0.0052 16.7 7.9 0.12 12.3 0.6 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4386) MIG-14_Wnt-bd PF06664.12 ORF80948 - 0.023 13.9 2.6 0.045 13.0 2.6 1.6 1 1 0 1 1 1 0 Wnt-binding factor required for Wnt secretion ATPase_gene1 PF09527.10 ORF80948 - 0.054 13.7 0.6 0.054 13.7 0.6 3.5 4 0 0 4 4 4 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Cytomega_TRL10 PF06084.11 ORF80948 - 0.15 12.0 0.9 0.22 11.6 0.0 1.6 2 0 0 2 2 2 0 Cytomegalovirus TRL10 protein DUF2207 PF09972.9 ORF80948 - 6.6 5.4 5.6 1.3 7.7 1.3 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) Smr PF01713.21 ORF80206 - 0.00039 20.7 0.4 0.00073 19.9 0.4 1.4 1 0 0 1 1 1 1 Smr domain DUF1256 PF06866.11 ORF79264 - 0.013 14.9 0.0 0.019 14.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1256) Peptidase_C1 PF00112.23 ORF78556 - 2.4e-09 37.6 2.1 2.6e-09 37.5 0.3 1.8 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF78556 - 0.0054 15.5 0.1 0.0085 14.9 0.1 1.2 1 0 0 1 1 1 1 Peptidase C1-like family partial_CstF PF15861.5 ORF78361 - 0.053 13.3 0.4 0.14 11.9 0.4 1.7 1 0 0 1 1 1 0 Partial cleavage stimulation factor domain DUF16 PF01519.16 ORF78361 - 0.13 12.7 5.1 0.44 11.1 0.9 2.3 2 1 0 2 2 2 0 Protein of unknown function DUF16 Chloroa_b-bind PF00504.21 ORF7797 - 3.9e-35 121.8 1.1 1.8e-34 119.6 0.1 1.9 2 0 0 2 2 2 1 Chlorophyll A-B binding protein Hemerythrin PF01814.23 ORF76133 - 0.00026 21.6 2.1 0.00063 20.4 1.4 1.9 2 1 0 2 2 2 1 Hemerythrin HHE cation binding domain Suppressor_APC PF11414.8 ORF76133 - 0.011 15.8 3.5 0.017 15.2 3.5 1.3 1 0 0 1 1 1 0 Adenomatous polyposis coli tumour suppressor protein MAP65_ASE1 PF03999.12 ORF76133 - 0.019 13.7 0.2 0.022 13.5 0.2 1.1 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Alpha-E PF04168.12 ORF76133 - 0.026 14.3 0.5 0.042 13.6 0.4 1.5 1 1 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. Caudo_TAP PF02413.17 ORF76133 - 0.1 12.7 4.1 0.16 12.1 4.1 1.4 1 1 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK LEA_6 PF10714.9 ORF76133 - 2.2 8.4 4.4 6.3 6.9 4.4 1.7 1 0 0 1 1 1 0 Late embryogenesis abundant protein 18 IATP PF04568.12 ORF74972 - 5.8 7.4 10.5 1.1 9.7 4.3 2.3 2 1 0 2 2 2 0 Mitochondrial ATPase inhibitor, IATP CRM1_repeat PF18777.1 ORF74214 - 0.076 12.5 3.1 5 6.7 0.2 2.5 1 1 1 2 2 2 0 Chromosome region maintenance or exportin repeat DUF805 PF05656.14 ORF74214 - 0.29 11.6 2.3 0.5 10.8 1.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF805) Pkinase PF00069.25 ORF73538 - 2.3e-17 63.2 0.0 3.2e-17 62.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73538 - 0.0035 16.7 0.0 0.0048 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase AA_permease PF00324.21 ORF7225 - 1.9e-22 79.5 10.7 2.1e-22 79.4 10.7 1.0 1 0 0 1 1 1 1 Amino acid permease Ribosomal_L7Ae PF01248.26 ORF7225 - 0.17 11.7 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SHMT PF00464.19 ORF72110 - 5.8e-83 278.7 0.0 7.2e-83 278.4 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase MFS_1 PF07690.16 ORF69684 - 1.1e-06 27.8 7.2 1.1e-06 27.8 7.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Fer4_11 PF13247.6 ORF69560 - 1.7e-29 101.9 10.8 1.7e-29 101.9 10.8 1.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF69560 - 5.7e-13 48.1 28.1 5.9e-05 22.9 2.6 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.27 ORF69560 - 8e-13 47.6 34.6 1.5e-07 30.9 4.7 5.6 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_9 PF13187.6 ORF69560 - 1.1e-11 44.8 24.7 1.4e-05 25.1 7.0 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF69560 - 2.7e-11 43.9 27.0 7.3e-05 23.3 11.2 3.5 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF69560 - 3.1e-11 42.8 39.6 2.3e-06 27.4 4.3 4.7 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_10 PF13237.6 ORF69560 - 2.2e-10 40.5 28.5 2.5e-05 24.3 12.0 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF69560 - 2.8e-07 31.0 38.2 0.007 17.2 5.5 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_4 PF12800.7 ORF69560 - 5.7e-07 29.6 36.4 0.003 17.9 2.1 4.6 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 ORF69560 - 0.00017 21.6 29.3 0.031 14.4 0.4 3.9 2 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF69560 - 0.00017 21.9 5.4 0.00017 21.9 5.4 3.2 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF69560 - 0.00042 20.8 25.3 0.53 10.9 0.4 4.2 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF69560 - 0.0011 19.9 30.4 0.44 11.5 2.5 4.7 2 2 3 5 5 5 2 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 ORF69560 - 0.017 15.7 8.0 0.085 13.4 2.1 3.8 5 0 0 5 5 4 0 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 ORF69560 - 0.58 10.3 10.2 2.7 8.2 0.3 2.4 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Cation_efflux PF01545.21 ORF67025 - 5.8e-14 52.3 0.4 7.2e-14 52.0 0.4 1.1 1 0 0 1 1 1 1 Cation efflux family RabGAP-TBC PF00566.18 ORF66265 - 2.7e-28 99.1 1.2 2.7e-28 99.1 1.2 1.4 2 0 0 2 2 2 1 Rab-GTPase-TBC domain adh_short PF00106.25 ORF65954 - 9.8e-08 31.7 0.0 1.2e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF65954 - 4.6e-07 29.6 0.3 6.2e-07 29.2 0.3 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase LysR_substrate PF03466.20 ORF65954 - 0.031 13.7 1.1 0.034 13.5 0.3 1.5 2 0 0 2 2 2 0 LysR substrate binding domain GDP_Man_Dehyd PF16363.5 ORF65954 - 0.096 12.1 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Ham1p_like PF01725.16 ORF65038 - 1.2e-56 191.6 0.0 1.4e-56 191.4 0.0 1.0 1 0 0 1 1 1 1 Ham1 family ANAPC10 PF03256.16 ORF64585 - 3.3e-57 193.1 0.1 3.5e-57 193.1 0.1 1.0 1 0 0 1 1 1 1 Anaphase-promoting complex, subunit 10 (APC10) F5_F8_type_C PF00754.25 ORF64585 - 0.00023 21.3 0.1 0.00033 20.8 0.1 1.4 1 1 0 1 1 1 1 F5/8 type C domain PITH PF06201.13 ORF64585 - 0.00042 20.6 1.0 0.00064 20.0 1.0 1.3 1 0 0 1 1 1 1 PITH domain MGS PF02142.22 ORF63629 - 1.2e-19 70.3 0.0 2.2e-19 69.4 0.0 1.4 1 0 0 1 1 1 1 MGS-like domain SmpA_OmlA PF04355.13 ORF63629 - 0.0041 16.9 0.0 0.0077 16.0 0.0 1.4 1 0 0 1 1 1 1 SmpA / OmlA family RNR_Alpha PF17975.1 ORF63356 - 0.052 14.1 0.3 0.12 12.9 0.3 1.6 1 0 0 1 1 1 0 Ribonucleotide reductase alpha domain ABC_tran PF00005.27 ORF62971 - 9.7e-15 55.3 0.0 1.3e-14 54.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF62971 - 1e-06 28.8 0.0 1.4e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system MFS_1_like PF12832.7 ORF61412 - 3.4e-27 95.3 9.6 4e-27 95.1 9.6 1.1 1 0 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 ORF61412 - 1.4e-08 34.1 6.5 1.4e-08 34.1 6.5 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily Nuc_H_symport PF03825.16 ORF61412 - 1.4e-07 30.9 2.9 1.6e-07 30.7 2.9 1.1 1 0 0 1 1 1 1 Nucleoside H+ symporter Sugar_tr PF00083.24 ORF61412 - 0.045 12.6 10.9 0.041 12.7 8.9 1.7 1 1 1 2 2 2 0 Sugar (and other) transporter CENP-B_dimeris PF09026.10 ORF60386 - 0.0058 17.0 0.3 0.009 16.4 0.3 1.2 1 0 0 1 1 1 1 Centromere protein B dimerisation domain NAD-GH PF10712.9 ORF57850 - 4.1e-28 98.2 0.3 4.7e-28 98.0 0.3 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase V-SNARE PF05008.15 ORF55718 - 5.2e-07 30.0 3.4 6.1e-07 29.7 0.5 2.2 2 1 0 2 2 2 1 Vesicle transport v-SNARE protein N-terminus DUF349 PF03993.12 ORF55718 - 0.06 13.6 0.4 0.06 13.6 0.4 2.7 3 1 0 3 3 3 0 Domain of Unknown Function (DUF349) SesA PF17107.5 ORF55718 - 0.079 13.2 0.1 0.18 12.0 0.1 1.6 1 0 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases V-SNARE_C PF12352.8 ORF55718 - 0.087 13.1 0.7 1.2 9.5 0.1 2.8 3 0 0 3 3 3 0 Snare region anchored in the vesicle membrane C-terminus Spc7 PF08317.11 ORF55718 - 2.3 7.0 11.0 4.7 6.0 3.9 2.2 2 1 0 2 2 2 0 Spc7 kinetochore protein Laminin_I PF06008.14 ORF55718 - 4.1 7.0 11.0 1.8 8.2 0.7 2.6 1 1 2 3 3 3 0 Laminin Domain I DUF883 PF05957.13 ORF55718 - 6.7 7.4 7.5 6.1 7.5 0.6 2.8 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) PRP21_like_P PF12230.8 ORF550 - 1.4e-17 64.3 3.4 1.4e-17 64.3 3.4 1.7 2 0 0 2 2 2 1 Pre-mRNA splicing factor PRP21 like protein zf_UBZ PF18439.1 ORF550 - 9.6e-07 28.3 0.2 2e-06 27.2 0.2 1.6 1 0 0 1 1 1 1 Ubiquitin-Binding Zinc Finger Actin_micro PF17003.5 ORF550 - 0.001 18.4 0.5 0.0012 18.1 0.5 1.1 1 0 0 1 1 1 1 Putative actin-like family OmpA PF00691.20 ORF550 - 0.0054 17.1 0.1 0.012 16.0 0.1 1.6 1 0 0 1 1 1 1 OmpA family DUF4451 PF14616.6 ORF550 - 0.0098 16.1 0.2 0.019 15.2 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4451) OrsD PF12013.8 ORF550 - 0.066 13.7 1.6 0.097 13.1 0.5 2.0 1 1 1 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D Ank_2 PF12796.7 ORF54200 - 3.1e-10 40.5 0.2 5.1e-08 33.4 0.0 2.8 2 2 1 3 3 3 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF54200 - 2.4e-08 34.4 0.0 0.0041 17.7 0.0 3.7 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF54200 - 4.9e-08 33.1 0.0 0.0049 17.2 0.0 3.8 3 1 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF54200 - 2.3e-07 30.6 0.0 0.05 14.2 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF54200 - 1.4e-05 25.3 0.4 0.12 12.7 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeats (many copies) NYN PF01936.18 ORF54200 - 0.18 12.2 0.0 0.54 10.7 0.0 1.8 1 1 0 1 1 1 0 NYN domain PPR PF01535.20 ORF50125 - 3.7e-10 39.3 2.7 0.0013 18.8 0.0 3.5 3 0 0 3 3 3 3 PPR repeat PPR_2 PF13041.6 ORF50125 - 6.9e-09 35.8 2.2 3.1e-05 24.1 0.3 3.1 2 1 1 3 3 3 2 PPR repeat family PPR_1 PF12854.7 ORF50125 - 0.0033 17.1 0.2 0.055 13.2 0.0 2.8 3 0 0 3 3 3 1 PPR repeat PPR_3 PF13812.6 ORF50125 - 0.0051 16.9 0.0 0.011 15.8 0.0 1.5 1 0 0 1 1 1 1 Pentatricopeptide repeat domain TPR_14 PF13428.6 ORF50125 - 0.0072 17.1 0.5 0.31 12.0 0.3 2.5 1 1 1 2 2 2 1 Tetratricopeptide repeat AA_permease PF00324.21 ORF486 - 1.9e-22 79.5 10.7 2.1e-22 79.4 10.7 1.0 1 0 0 1 1 1 1 Amino acid permease Ribosomal_L7Ae PF01248.26 ORF486 - 0.17 11.7 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LMBR1 PF04791.16 ORF47601 - 0.011 14.6 2.0 0.011 14.6 2.0 1.5 2 0 0 2 2 2 0 LMBR1-like membrane protein DUF4131 PF13567.6 ORF47601 - 0.24 11.1 0.1 0.24 11.1 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) PalH PF08733.10 ORF47601 - 3.4 6.6 11.6 0.79 8.7 5.2 2.0 2 0 0 2 2 2 0 PalH/RIM21 DUF4407 PF14362.6 ORF46876 - 8.2 5.7 9.7 10 5.4 9.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AA_permease PF00324.21 ORF46567 - 1.9e-22 79.5 10.7 2.1e-22 79.4 10.7 1.0 1 0 0 1 1 1 1 Amino acid permease Ribosomal_L7Ae PF01248.26 ORF46567 - 0.17 11.7 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family EF-hand_13 PF17958.1 ORF46001 - 6.8e-37 125.2 0.3 1.9e-36 123.8 0.1 1.8 2 1 1 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF46001 - 6.5e-10 38.7 1.8 0.0011 18.8 0.4 3.4 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF46001 - 3.6e-09 36.9 7.3 4.3e-05 23.9 0.2 3.2 2 2 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF46001 - 1.8e-08 33.7 2.8 0.0081 16.0 0.1 3.8 4 0 0 4 4 4 2 EF-hand domain EF-hand_1 PF00036.32 ORF46001 - 2.4e-08 33.0 6.3 0.0059 16.1 0.1 4.3 5 0 0 5 5 5 2 EF hand EF-hand_5 PF13202.6 ORF46001 - 2.2e-05 23.7 1.4 0.0078 15.7 0.1 2.9 2 0 0 2 2 2 2 EF hand Sec34 PF04136.15 ORF46001 - 0.013 15.4 0.1 0.072 13.0 0.0 2.1 1 1 1 2 2 2 0 Sec34-like family BRCT_2 PF16589.5 ORF45878 - 5.2e-13 49.2 0.0 3.9e-12 46.4 0.0 2.1 2 0 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain Myb_DNA-binding PF00249.31 ORF45878 - 0.027 14.6 0.0 0.043 14.0 0.0 1.3 1 0 0 1 1 1 0 Myb-like DNA-binding domain PAPS_reduct PF01507.19 ORF45601 - 2.5e-37 128.6 0.0 2.9e-37 128.4 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Aldo_ket_red PF00248.21 ORF44861 - 3.7e-30 105.1 0.0 1.3e-28 100.1 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family AFG1_ATPase PF03969.16 ORF42693 - 2.7e-30 105.5 0.1 3e-30 105.3 0.1 1.1 1 0 0 1 1 1 1 AFG1-like ATPase DHHC PF01529.20 ORF40949 - 0.0006 19.9 0.1 0.001 19.2 0.1 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase COPIIcoated_ERV PF07970.12 ORF40861 - 2.3e-15 57.1 1.0 2.9e-15 56.7 1.0 1.2 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter SPACA7 PF15307.6 ORF40639 - 0.13 12.5 5.0 0.75 10.1 0.4 2.6 2 1 1 3 3 3 0 Sperm acrosome-associated protein 7 Pkinase PF00069.25 ORF40594 - 7.8e-09 35.3 0.0 1.2e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain UQ_con PF00179.26 ORF4019 - 1.4e-39 134.9 0.3 2e-39 134.4 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF4019 - 0.0042 17.4 0.1 0.0042 17.4 0.1 1.8 2 0 0 2 2 2 1 RWD domain CDC45 PF02724.14 ORF4019 - 0.043 12.1 6.8 0.051 11.9 6.8 1.1 1 0 0 1 1 1 0 CDC45-like protein RRM_3 PF08777.11 ORF4019 - 1 9.4 5.5 0.67 10.0 3.7 1.5 2 0 0 2 2 2 0 RNA binding motif Pkinase PF00069.25 ORF393 - 5.5e-30 104.6 1.7 7.5e-30 104.2 1.7 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF393 - 1.8e-14 53.6 0.5 2.6e-14 53.2 0.5 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase PRCH PF03967.13 ORF393 - 0.059 13.6 0.0 0.29 11.4 0.0 1.9 2 0 0 2 2 2 0 Photosynthetic reaction centre, H-chain N-terminal region DUF2312 PF10073.9 ORF393 - 0.36 10.5 3.2 0.84 9.3 0.4 2.5 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) DUF3431 PF11913.8 ORF3913 - 8e-10 38.9 0.0 1.8e-09 37.7 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3431) Pirin PF02678.16 ORF37288 - 1.5e-25 89.3 0.2 2.3e-25 88.6 0.2 1.3 1 0 0 1 1 1 1 Pirin Pirin_C_2 PF17954.1 ORF37288 - 5.1e-12 45.8 0.0 1.5e-11 44.3 0.0 1.7 2 0 0 2 2 2 1 Quercetinase C-terminal cupin domain Cupin_2 PF07883.11 ORF37288 - 4.9e-07 29.4 0.1 4.2e-06 26.4 0.2 2.0 2 0 0 2 2 2 1 Cupin domain AMPK1_CBM PF16561.5 ORF37288 - 0.017 15.4 0.0 4.5 7.6 0.0 2.7 2 1 1 3 3 3 0 Glycogen recognition site of AMP-activated protein kinase Ank_4 PF13637.6 ORF37144 - 0.045 14.4 0.7 0.37 11.4 0.1 2.7 3 1 0 3 3 3 0 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF37144 - 0.16 12.3 1.4 13 6.2 0.3 2.5 3 0 0 3 3 3 0 Ankyrin repeats (many copies) ASC PF00858.24 ORF33713 - 0.011 14.7 0.2 0.018 14.1 0.2 1.3 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel DNA_pol3_delta2 PF13177.6 ORF31819 - 1.3e-11 44.6 0.3 1.5e-11 44.3 0.3 1.1 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Sigma54_activ_2 PF14532.6 ORF31819 - 5.8e-06 26.5 0.0 0.0007 19.7 0.0 2.2 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 ORF31819 - 0.0021 17.8 0.0 0.23 11.2 0.0 2.4 2 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 ORF31819 - 0.0022 18.0 0.0 0.003 17.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 ORF31819 - 0.0044 17.5 0.2 0.014 15.8 0.2 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 ORF31819 - 0.0094 16.5 0.0 0.011 16.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 ORF31819 - 0.018 14.9 0.0 0.031 14.2 0.0 1.6 1 1 0 1 1 1 0 Rad17 P-loop domain ADIP PF11559.8 ORF31093 - 0.063 13.4 0.2 0.11 12.6 0.2 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding PKS_DE PF18369.1 ORF31093 - 2 9.0 7.2 3.2 8.4 0.3 3.3 3 1 0 3 3 3 0 Polyketide synthase dimerisation element domain Methyltransf_24 PF13578.6 ORF30899 - 0.088 13.8 0.1 0.25 12.4 0.1 1.7 1 1 0 1 1 1 0 Methyltransferase domain DUF3292 PF11696.8 ORF30800 - 0.29 9.5 3.6 0.38 9.1 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) MatE PF01554.18 ORF30777 - 2.5e-23 82.5 7.3 2.9e-23 82.3 7.3 1.1 1 0 0 1 1 1 1 MatE DUF2738 PF10927.8 ORF30691 - 0.0045 16.1 0.7 0.0061 15.7 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2738) Kelch_6 PF13964.6 ORF30691 - 0.018 15.3 0.0 0.051 13.9 0.0 1.8 1 0 0 1 1 1 0 Kelch motif BRCT_2 PF16589.5 ORF29463 - 5.2e-13 49.2 0.0 3.9e-12 46.4 0.0 2.1 2 0 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain Myb_DNA-binding PF00249.31 ORF29463 - 0.027 14.6 0.0 0.043 14.0 0.0 1.3 1 0 0 1 1 1 0 Myb-like DNA-binding domain KH_1 PF00013.29 ORF27603 - 1.1e-07 31.5 0.1 1.8e-07 30.9 0.1 1.4 1 0 0 1 1 1 1 KH domain CbiG_N PF11760.8 ORF27603 - 0.015 15.3 0.3 0.1 12.6 0.0 2.0 1 1 1 2 2 2 0 Cobalamin synthesis G N-terminal DUF3381 PF11861.8 ORF27603 - 0.25 11.1 0.0 0.33 10.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) Glyco_hydro_1 PF00232.18 ORF26528 - 1.5e-15 56.6 0.0 2.2e-15 56.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 P_C10 PF14974.6 ORF26528 - 5.1e-05 23.3 0.0 9.4e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Protein C10 Pkinase PF00069.25 ORF24991 - 7.6e-26 91.0 0.1 1.2e-25 90.3 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24991 - 7.8e-10 38.5 0.0 1.5e-09 37.6 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF24991 - 4.2e-05 23.0 0.0 6.5e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Kinase-like EF-hand_8 PF13833.6 ORF24991 - 0.00043 20.1 0.6 0.0013 18.5 0.2 2.1 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF24991 - 0.00091 18.6 0.5 0.0022 17.4 0.5 1.7 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF24991 - 0.0026 17.6 2.0 0.0057 16.5 0.4 2.5 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF24991 - 0.0041 17.5 1.2 0.016 15.6 0.4 2.3 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF24991 - 0.0043 16.5 2.6 0.009 15.5 0.7 2.5 2 0 0 2 2 2 1 EF hand GST_N_3 PF13417.6 ORF22714 - 1.6e-05 25.2 0.0 2.9e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF22714 - 0.00025 21.3 0.0 0.00045 20.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF22714 - 0.00053 19.9 0.2 0.003 17.6 0.0 2.5 1 1 1 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF22714 - 0.0012 19.1 0.0 0.0024 18.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF22714 - 0.0033 17.6 0.0 0.007 16.5 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF22714 - 0.02 15.1 0.1 0.044 14.0 0.0 1.8 2 1 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Cyclin_N PF00134.23 ORF21784 - 4.6e-11 42.6 0.0 1.7e-09 37.5 0.0 2.2 2 0 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF21784 - 0.099 12.7 0.3 3.5 7.7 0.2 2.3 2 0 0 2 2 2 0 Cyclin, C-terminal domain Corona_3 PF04694.12 ORF21784 - 0.12 12.7 0.0 0.2 12.0 0.0 1.4 1 0 0 1 1 1 0 Coronavirus ORF3 protein EMP24_GP25L PF01105.24 ORF20633 - 2.7e-21 76.3 1.2 3.1e-21 76.1 1.2 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Spc24 PF08286.11 ORF20633 - 0.035 14.3 0.3 0.066 13.5 0.3 1.5 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF922 PF06037.11 ORF20633 - 0.17 11.7 0.7 0.23 11.3 0.7 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) DUF229 PF02995.17 ORF20088 - 1.6e-20 73.2 0.3 2.1e-20 72.8 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF20088 - 8.3e-07 28.7 0.4 9.2e-07 28.5 0.4 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF20088 - 0.04 13.5 0.1 0.046 13.3 0.1 1.2 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase Med19 PF10278.9 ORF1851 - 0.026 14.4 0.0 0.033 14.1 0.0 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF572 PF04502.13 ORF16725 - 7.7e-05 22.5 5.3 9.7e-05 22.1 5.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) DUF5563 PF17718.1 ORF16725 - 0.026 14.1 4.3 0.15 11.6 4.3 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5563) BAF1_ABF1 PF04684.13 ORF16725 - 0.15 11.1 3.9 0.18 10.8 3.9 1.1 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor Synaptobrevin PF00957.21 ORF1447 - 4.7e-12 45.5 1.2 1e-11 44.4 1.2 1.6 1 0 0 1 1 1 1 Synaptobrevin RNase_H2-Ydr279 PF09468.10 ORF1447 - 0.0012 19.1 0.7 0.0017 18.5 0.7 1.5 1 1 0 1 1 1 1 Ydr279p protein family (RNase H2 complex component) wHTH domain RXLR PF16810.5 ORF1447 - 0.031 14.7 4.1 0.49 10.8 0.2 2.4 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity BLOC1_2 PF10046.9 ORF1447 - 0.069 13.5 1.6 0.77 10.1 0.1 2.3 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sugar_tr PF00083.24 ORF13634 - 1.9e-13 50.1 0.3 2.1e-13 49.9 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2070 PF09843.9 ORF13634 - 1.2 7.3 5.7 3.7 5.7 3.6 1.9 1 1 0 2 2 2 0 Predicted membrane protein (DUF2070) RNA_pol PF00940.19 ORF13197 - 0.03 13.2 0.4 0.04 12.8 0.4 1.1 1 0 0 1 1 1 0 DNA-dependent RNA polymerase DUF2423 PF10338.9 ORF13197 - 0.19 12.0 2.2 0.41 10.9 2.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2423) TTL PF03133.15 ORF11893 - 2.6e-39 135.1 0.1 3.1e-39 134.8 0.1 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF11893 - 8.7e-06 25.2 0.0 1.2e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp Ins134_P3_kin PF05770.11 ORF11893 - 0.027 14.0 0.0 0.034 13.7 0.0 1.3 1 0 0 1 1 1 0 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain ATPgrasp_ST PF14397.6 ORF11893 - 0.04 13.2 0.0 0.053 12.8 0.0 1.3 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp NOA36 PF06524.12 ORF11893 - 0.71 9.1 4.9 1.3 8.3 4.9 1.3 1 0 0 1 1 1 0 NOA36 protein FAM176 PF14851.6 ORF11893 - 2 8.1 5.9 0.83 9.3 3.1 1.7 2 0 0 2 2 2 0 FAM176 family DNA_pol_phi PF04931.13 ORF11893 - 9.9 4.1 9.6 2 6.4 5.4 1.7 2 0 0 2 2 2 0 DNA polymerase phi FAM220 PF15487.6 ORF112445 - 6.2 6.4 13.0 10 5.7 13.0 1.5 1 1 0 1 1 1 0 FAM220 family zf-B_box PF00643.24 ORF112345 - 0.005 17.0 3.8 0.0085 16.2 3.8 1.3 1 0 0 1 1 1 1 B-box zinc finger WW PF00397.26 ORF10993 - 0.0006 19.8 0.0 0.0013 18.7 0.0 1.6 1 0 0 1 1 1 1 WW domain CusF_Ec PF11604.8 ORF10993 - 0.024 14.6 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 Copper binding periplasmic protein CusF AFG1_ATPase PF03969.16 ORF109807 - 2.2e-30 105.8 0.0 2.5e-30 105.6 0.0 1.1 1 0 0 1 1 1 1 AFG1-like ATPase YcgR_2 PF12945.7 ORF109807 - 0.11 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Flagellar protein YcgR Cna_B PF05738.13 ORF108928 - 0.015 15.8 1.0 0.015 15.8 1.0 1.9 2 0 0 2 2 2 0 Cna protein B-type domain DUF4735 PF15882.5 ORF108928 - 0.11 11.9 4.5 0.1 12.0 3.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4735) Glyco_transf_22 PF03901.17 ORF10828 - 4.5e-09 36.1 0.2 5.2e-09 35.8 0.2 1.1 1 0 0 1 1 1 1 Alg9-like mannosyltransferase family Ureide_permease PF07168.11 ORF10805 - 1.7 7.3 5.1 2.2 7.0 5.1 1.2 1 0 0 1 1 1 0 Ureide permease CPSF100_C PF13299.6 ORF10805 - 2.1 8.5 9.1 4 7.6 9.1 1.5 1 1 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal G3P_acyltransf PF02660.15 ORF106878 - 6.2e-50 169.4 9.4 7.2e-50 169.2 9.4 1.0 1 0 0 1 1 1 1 Glycerol-3-phosphate acyltransferase PNP_UDP_1 PF01048.20 ORF10644 - 8e-19 67.8 0.3 8.8e-19 67.7 0.3 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily Moricin PF06451.11 ORF106417 - 0.098 12.4 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Moricin DUF1118 PF06549.12 ORF105886 - 9.6e-07 29.1 7.9 9.6e-07 29.1 7.9 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1118) Aldolase PF01081.19 ORF105756 - 1.5e-29 102.8 0.4 1.9e-29 102.5 0.4 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase TMP-TENI PF02581.17 ORF105756 - 4.7e-05 22.8 0.1 0.00027 20.3 0.1 2.3 1 1 1 2 2 2 1 Thiamine monophosphate synthase MFS_1 PF07690.16 ORF105726 - 2.2e-09 36.7 15.4 3.2e-09 36.2 15.4 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF105726 - 3.7e-05 22.5 13.5 3.7e-05 22.5 13.5 1.5 2 0 0 2 2 2 1 MFS/sugar transport protein MFS_1_like PF12832.7 ORF105726 - 0.0007 18.6 10.9 0.001 18.1 10.9 1.1 1 0 0 1 1 1 1 MFS_1 like family NDUF_B5 PF09781.9 ORF105726 - 0.05 13.2 0.6 0.077 12.6 0.6 1.2 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit CDO_I PF05995.12 ORF105395 - 8e-12 44.8 0.0 9.9e-12 44.5 0.0 1.2 1 0 0 1 1 1 1 Cysteine dioxygenase type I PCO_ADO PF07847.12 ORF105395 - 0.013 15.0 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 PCO_ADO Cupin_1 PF00190.22 ORF105395 - 0.015 14.9 0.0 0.024 14.3 0.0 1.2 1 0 0 1 1 1 0 Cupin SPACA7 PF15307.6 ORF103564 - 0.13 12.5 5.0 0.75 10.1 0.4 2.6 2 1 1 3 3 3 0 Sperm acrosome-associated protein 7 Enamelin PF15362.6 ORF102298 - 0.053 11.9 1.8 0.066 11.5 1.8 1.0 1 0 0 1 1 1 0 Enamelin WD40 PF00400.32 ORF100765 - 5.8e-07 30.1 5.8 7.6e-06 26.6 0.2 3.6 3 2 0 3 3 3 2 WD domain, G-beta repeat Wzy_C PF04932.15 NODE_35372_length_610_cov_2.600000_g28346_i0reverse_frame_1 - 0.052 13.2 1.1 0.052 13.2 1.1 3.2 3 1 0 3 3 3 0 O-Antigen ligase LisH_TPL PF17814.1 NODE_35358_length_610_cov_67.730435_g28332_i0forward_frame_1 - 0.003 17.2 1.0 0.0061 16.2 0.3 1.8 2 0 0 2 2 2 1 LisH-like dimerisation domain ETF_alpha PF00766.19 NODE_35343_length_610_cov_247.720000_g26923_i1reverse_frame_1 - 0.1 12.7 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Electron transfer flavoprotein FAD-binding domain TonB_dep_Rec PF00593.24 NODE_35320_length_611_cov_3.185764_g28299_i0reverse_frame_1 - 6.1e-13 49.4 23.6 7.5e-13 49.2 23.6 1.1 1 0 0 1 1 1 1 TonB dependent receptor Hamartin PF04388.12 NODE_35318_length_611_cov_3.590278_g28297_i0reverse_frame_1 - 0.42 9.2 4.1 0.47 9.1 4.1 1.0 1 0 0 1 1 1 0 Hamartin protein Xan_ur_permease PF00860.20 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_1 - 5.2e-52 176.9 15.8 6.1e-52 176.6 15.8 1.0 1 0 0 1 1 1 1 Permease family DUF1201 PF06716.11 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_1 - 0.029 14.4 1.3 0.092 12.8 1.3 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1201) TPPK_C PF12555.8 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_1 - 0.31 11.1 0.2 0.31 11.1 0.2 3.2 4 0 0 4 4 4 0 Thiamine pyrophosphokinase C terminal DUF2613 PF11021.8 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_1 - 2.9 8.1 9.5 19 5.4 3.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2613) Dna2 PF08696.11 NODE_35277_length_611_cov_4274.081597_g720_i8reverse_frame_1 - 0.011 15.5 2.7 0.033 14.0 2.7 1.8 1 1 0 1 1 1 0 DNA replication factor Dna2 Pro_sub2 PF18513.1 NODE_35277_length_611_cov_4274.081597_g720_i8reverse_frame_1 - 0.019 15.1 0.6 0.019 15.1 0.6 2.0 2 0 0 2 2 2 0 Prodomain subtilisin 2 FAM184 PF15665.5 NODE_35277_length_611_cov_4274.081597_g720_i8reverse_frame_1 - 0.17 11.6 14.6 0.15 11.8 7.1 2.0 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B RNA_pol_A_CTD PF03118.15 NODE_35277_length_611_cov_4274.081597_g720_i8forward_frame_1 - 0.065 13.0 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain TRIQK PF15168.6 NODE_35266_length_612_cov_27.154246_g28251_i0reverse_frame_1 - 0.13 12.2 2.0 0.37 10.7 0.7 2.2 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family MORN PF02493.20 NODE_35261_length_612_cov_68.301560_g28247_i0reverse_frame_1 - 1.3e-11 43.6 23.6 8.8e-05 22.2 0.9 4.6 4 0 0 4 4 4 4 MORN repeat ANAPC3 PF12895.7 NODE_35258_length_612_cov_77.693241_g28244_i0reverse_frame_1 - 0.076 13.3 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 APOBEC1 PF18769.1 NODE_35238_length_612_cov_267.712305_g28228_i0forward_frame_1 - 1.7 9.0 4.0 1.7 9.0 0.4 2.3 1 1 1 2 2 2 0 APOBEC1 AAA_11 PF13086.6 NODE_35229_length_613_cov_2.240484_g28222_i0reverse_frame_2 - 4.8e-08 33.1 0.1 7e-08 32.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain Myticin-prepro PF10690.9 NODE_35227_length_613_cov_2.536332_g28220_i0forward_frame_3 - 0.023 14.9 2.5 0.023 14.9 2.5 1.8 2 1 0 2 2 2 0 Myticin pre-proprotein from the mussel DUF1774 PF08611.10 NODE_35225_length_613_cov_4.385813_g28218_i0reverse_frame_3 - 0.14 12.5 4.9 0.037 14.4 1.7 1.7 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF1774) DuoxA PF10204.9 NODE_35224_length_613_cov_54.548443_g28217_i0forward_frame_3 - 0.0097 14.9 1.0 0.016 14.2 1.0 1.3 1 0 0 1 1 1 1 Dual oxidase maturation factor DUF535 PF04393.13 NODE_35221_length_613_cov_59.562284_g28214_i0forward_frame_3 - 0.011 15.0 1.9 0.017 14.4 1.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF535) Mesd PF10185.9 NODE_35218_length_613_cov_69.617647_g28211_i0reverse_frame_3 - 0.0032 17.4 2.5 0.0045 16.9 2.5 1.3 1 0 0 1 1 1 1 Chaperone for wingless signalling and trafficking of LDL receptor AP3D1 PF06375.11 NODE_35218_length_613_cov_69.617647_g28211_i0reverse_frame_2 - 3 8.1 12.7 5.5 7.2 12.7 1.6 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF3302 PF11742.8 NODE_35218_length_613_cov_69.617647_g28211_i0forward_frame_2 - 0.27 11.4 4.0 3.6 7.8 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3302) Fucokinase PF07959.12 NODE_35177_length_614_cov_2.511226_g28175_i0reverse_frame_3 - 0.0014 17.6 0.8 0.0017 17.4 0.8 1.0 1 0 0 1 1 1 1 L-fucokinase MORN PF02493.20 NODE_35173_length_614_cov_3.537133_g28171_i0forward_frame_3 - 5.6e-25 85.7 51.1 2.6e-06 27.0 1.2 7.3 7 0 0 7 7 7 7 MORN repeat SHIPPO-rpt PF07004.12 NODE_35158_length_614_cov_88.371330_g28156_i0forward_frame_3 - 0.00063 20.5 6.3 0.09 13.7 0.8 2.5 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat SHIPPO-rpt PF07004.12 NODE_35158_length_614_cov_88.371330_g28156_i0forward_frame_2 - 0.094 13.7 0.2 0.094 13.7 0.2 1.9 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat GMP_PDE_delta PF05351.11 NODE_35145_length_614_cov_157.996546_g28143_i0reverse_frame_3 - 2.9e-30 105.4 0.0 4e-30 105.0 0.0 1.2 1 0 0 1 1 1 1 GMP-PDE, delta subunit RCC1_2 PF13540.6 NODE_35143_length_614_cov_166.449050_g22383_i1reverse_frame_2 - 1.1e-12 47.3 7.6 0.0036 17.1 0.1 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat NDUF_B4 PF07225.12 NODE_35143_length_614_cov_166.449050_g22383_i1reverse_frame_2 - 0.019 14.9 0.0 1.3 8.9 0.0 2.7 1 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) FtsQ PF03799.15 NODE_35143_length_614_cov_166.449050_g22383_i1reverse_frame_2 - 0.022 15.6 0.0 9.7 7.0 0.0 3.0 1 1 2 3 3 3 0 Cell division protein FtsQ Cerato-platanin PF07249.12 NODE_35143_length_614_cov_166.449050_g22383_i1reverse_frame_2 - 0.028 14.6 6.5 0.8 9.8 0.3 3.1 1 1 2 3 3 3 0 Cerato-platanin zf_Rg PF17915.1 NODE_35143_length_614_cov_166.449050_g22383_i1reverse_frame_2 - 0.096 12.1 0.1 7.6 6.0 0.0 2.9 3 0 0 3 3 3 0 Reverse gyrase zinc finger Glyco_hydro_46 PF01374.18 NODE_35143_length_614_cov_166.449050_g22383_i1reverse_frame_2 - 0.15 11.7 0.2 4.9 6.7 0.0 2.5 2 1 1 3 3 3 0 Glycosyl hydrolase family 46 Pro_CA PF00484.19 NODE_35143_length_614_cov_166.449050_g22383_i1reverse_frame_2 - 0.2 11.9 1.5 6.1 7.1 0.2 2.4 1 1 1 2 2 2 0 Carbonic anhydrase MyTH4 PF00784.17 NODE_35143_length_614_cov_166.449050_g22383_i1forward_frame_3 - 0.23 12.0 16.9 1.1 9.8 0.4 4.0 5 0 0 5 5 5 0 MyTH4 domain DUF3864 PF12980.7 NODE_35143_length_614_cov_166.449050_g22383_i1forward_frame_3 - 2.4 8.6 0.0 2.4 8.6 0.0 2.9 4 0 0 4 4 4 0 Domain of Unknown Function with PDB structure (DUF3864) FoP_duplication PF13865.6 NODE_35133_length_614_cov_2219.640760_g28135_i0forward_frame_2 - 0.00035 21.0 27.2 0.004 17.7 27.1 2.5 1 1 0 1 1 1 1 C-terminal duplication domain of Friend of PRMT1 RCC1_2 PF13540.6 NODE_35119_length_615_cov_73.674138_g28122_i0reverse_frame_3 - 1.8e-08 34.0 11.1 0.051 13.4 0.1 4.5 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_35119_length_615_cov_73.674138_g28122_i0reverse_frame_3 - 0.00034 20.8 0.6 3.1 7.9 0.0 3.9 3 1 1 4 4 4 2 Uncharacterised ACR, YagE family COG1723 zf-AN1 PF01428.16 NODE_35078_length_615_cov_43827.687931_g28089_i0reverse_frame_3 - 1.5e-09 37.9 11.5 1.5e-09 37.9 11.5 2.3 3 0 0 3 3 3 1 AN1-like Zinc finger zf-A20 PF01754.16 NODE_35078_length_615_cov_43827.687931_g28089_i0reverse_frame_3 - 0.005 16.8 0.7 0.005 16.8 0.7 3.0 4 0 0 4 4 4 1 A20-like zinc finger RPAP2_Rtr1 PF04181.13 NODE_35078_length_615_cov_43827.687931_g28089_i0reverse_frame_3 - 0.067 13.5 0.3 0.067 13.5 0.3 2.5 2 1 1 3 3 3 0 Rtr1/RPAP2 family Bud13 PF09736.9 ORF99783 - 0.04 14.3 2.9 0.055 13.9 2.9 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor of RES complex BBS2_N PF14781.6 ORF99783 - 0.11 12.4 1.9 0.19 11.6 1.9 1.3 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Evr1_Alr PF04777.13 ORF99396 - 2.3e-19 69.7 0.1 5.8e-19 68.4 0.0 1.7 1 1 1 2 2 2 1 Erv1 / Alr family zinc-ribbons_6 PF07191.12 ORF99396 - 0.32 11.0 3.3 7 6.7 0.3 2.3 1 1 1 2 2 2 0 zinc-ribbons tRNA-synt_His PF13393.6 ORF99057 - 2.2e-17 63.3 0.1 3.7e-17 62.6 0.1 1.4 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 ORF99057 - 9.7e-16 57.7 0.1 1.3e-15 57.3 0.1 1.2 1 0 0 1 1 1 1 Anticodon binding domain HGTP_anticodon2 PF12745.7 ORF99057 - 1.2e-10 41.4 0.9 1.6e-10 41.0 0.9 1.1 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs DUF1266 PF06889.11 ORF97155 - 1.9e-42 145.3 7.5 2.2e-42 145.1 7.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1266) NfrA_C PF13283.6 ORF97155 - 0.0087 15.6 0.5 0.012 15.1 0.5 1.3 1 0 0 1 1 1 1 Bacteriophage N adsorption protein A C-term EF-hand_6 PF13405.6 ORF96752 - 4.8e-07 29.2 0.3 0.046 13.7 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF96752 - 0.00015 22.1 0.1 0.00043 20.7 0.1 1.8 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF96752 - 0.00053 19.3 0.2 0.1 12.2 0.1 2.7 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF96752 - 0.012 15.0 3.2 1.5 8.5 0.4 3.2 3 0 0 3 3 3 0 EF hand Wtap PF17098.5 ORF96752 - 0.015 15.2 0.4 0.038 13.9 0.1 1.7 2 0 0 2 2 2 0 WTAP/Mum2p family EF-hand_8 PF13833.6 ORF96752 - 0.034 14.0 0.1 6 6.8 0.1 2.4 2 0 0 2 2 2 0 EF-hand domain pair 2-Hacid_dh_C PF02826.19 ORF9523 - 7.2e-25 87.4 0.0 8.9e-25 87.1 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 ORF9523 - 0.00013 22.5 1.2 0.00076 20.0 1.2 2.1 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 ORF9523 - 0.032 13.5 1.7 0.37 10.1 0.1 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_2 PF03446.15 ORF9523 - 0.072 13.3 0.2 0.21 11.7 0.2 1.7 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 ORF9523 - 0.19 11.3 0.0 0.31 10.6 0.0 1.4 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Bud13 PF09736.9 ORF94992 - 0.04 14.3 2.9 0.055 13.9 2.9 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor of RES complex BBS2_N PF14781.6 ORF94992 - 0.11 12.4 1.9 0.19 11.6 1.9 1.3 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Ank_4 PF13637.6 ORF93261 - 1.6e-13 50.9 0.6 3.8e-05 24.2 0.1 3.3 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF93261 - 5.7e-13 49.3 0.0 4.2e-05 24.1 0.1 3.1 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF93261 - 1.5e-12 47.5 0.3 3.5e-05 24.0 0.0 3.2 4 0 0 4 4 4 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF93261 - 6.3e-11 42.2 5.6 0.022 15.2 0.1 3.6 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF93261 - 1.1e-10 40.7 3.3 0.025 15.1 0.0 4.2 4 1 0 4 4 4 3 Ankyrin repeat DUF2975 PF11188.8 ORF9322 - 0.019 14.8 8.0 0.66 9.9 5.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) ABC_tran PF00005.27 ORF9300 - 1e-11 45.5 0.7 1.5e-11 45.0 0.7 1.3 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF9300 - 0.00059 19.5 0.1 0.0012 18.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 ORF9300 - 0.00076 19.4 0.5 0.002 18.0 0.5 1.6 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF9300 - 0.0024 17.9 1.1 0.0087 16.1 0.1 2.2 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF9300 - 0.019 15.5 0.3 0.037 14.5 0.3 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF9300 - 0.026 14.9 0.0 0.045 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain SMC_N PF02463.19 ORF9300 - 0.028 13.8 0.3 0.052 13.0 0.0 1.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 ORF9300 - 0.032 14.2 0.2 0.044 13.7 0.2 1.5 1 1 0 1 1 1 0 RsgA GTPase ATP-synt_ab PF00006.25 ORF9300 - 0.035 13.7 0.2 0.062 12.9 0.2 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF87 PF01935.17 ORF9300 - 0.095 12.8 4.0 0.12 12.5 0.2 2.3 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_30 PF13604.6 ORF9300 - 0.11 12.2 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 ORF9300 - 0.11 12.1 2.7 0.13 12.0 0.4 1.9 2 0 0 2 2 2 0 AAA ATPase domain Sigma54_activat PF00158.26 ORF9300 - 0.13 12.0 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF3683 PF12447.8 ORF91904 - 0.2 11.8 2.7 0.15 12.2 0.3 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3683) Autophagy_N PF03986.13 ORF91195 - 2.4e-35 121.4 8.9 8.1e-35 119.7 8.9 1.8 1 1 0 1 1 1 1 Autophagocytosis associated protein (Atg3), N-terminal domain Autophagy_act_C PF03987.15 ORF91195 - 2.7e-05 24.7 0.1 5.3e-05 23.7 0.1 1.5 1 0 0 1 1 1 1 Autophagocytosis associated protein, active-site domain Astro_capsid_p PF12226.8 ORF91195 - 0.31 10.1 12.9 0.38 9.9 12.9 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein SID-1_RNA_chan PF13965.6 ORF91195 - 0.33 9.3 2.0 0.32 9.4 2.0 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 SDA1 PF05285.12 ORF91195 - 1 8.7 21.3 1.2 8.5 21.3 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF91195 - 1.7 6.7 20.5 2 6.5 20.5 1.0 1 0 0 1 1 1 0 Nop14-like family RRP7 PF12923.7 ORF91195 - 3.2 7.9 15.0 0.3 11.2 9.8 1.8 1 1 1 2 2 2 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain CDC45 PF02724.14 ORF91195 - 5.5 5.2 15.0 6.8 4.9 15.0 1.1 1 0 0 1 1 1 0 CDC45-like protein TRAP_alpha PF03896.16 ORF91195 - 7.7 5.6 10.9 13 4.9 10.9 1.4 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit BT1 PF03092.16 ORF91195 - 8.8 4.4 6.5 11 4.2 6.5 1.1 1 0 0 1 1 1 0 BT1 family LolA PF03548.15 ORF89332 - 1e-58 197.7 4.1 1.2e-58 197.5 4.1 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA DUF2092 PF09865.9 ORF89332 - 1.6e-05 24.4 0.2 0.011 15.0 0.0 2.3 2 1 0 2 2 2 2 Predicted periplasmic protein (DUF2092) DUF1964 PF09244.10 ORF89332 - 0.0055 17.1 0.6 0.2 12.1 0.0 2.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1964) CBM_6 PF03422.15 ORF89332 - 0.04 14.2 0.4 0.069 13.5 0.4 1.4 1 0 0 1 1 1 0 Carbohydrate binding module (family 6) DUF3220 PF11516.8 ORF89332 - 0.055 13.7 0.2 0.1 12.8 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) DUF5024 PF16427.5 ORF89332 - 0.059 13.7 0.2 0.15 12.4 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5024) FAD_binding_3 PF01494.19 ORF88685 - 2e-08 33.9 0.1 3e-08 33.3 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF88685 - 0.02 13.9 0.0 0.027 13.5 0.0 1.2 1 0 0 1 1 1 0 Squalene epoxidase DUF2405 PF10293.9 ORF86297 - 0.76 9.7 9.8 0.08 12.9 1.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF2405) Ribosomal_L17 PF01196.19 ORF85834 - 1.9e-11 44.7 0.7 7.2e-11 42.8 0.1 2.0 2 0 0 2 2 2 1 Ribosomal protein L17 TraC PF07820.12 ORF85834 - 0.5 10.7 2.5 0.54 10.6 0.0 2.2 3 0 0 3 3 3 0 TraC-like protein Protocadherin PF08374.11 ORF82917 - 0.09 12.7 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Protocadherin F1F0-ATPsyn_F PF10791.9 ORF82887 - 0.026 15.0 0.5 0.071 13.6 0.5 1.7 1 0 0 1 1 1 0 Mitochondrial F1-F0 ATP synthase subunit F of fungi DUF4188 PF13826.6 ORF82887 - 7.4 6.9 8.5 4.5 7.6 1.4 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4188) tRNA_anti_2 PF13742.6 ORF82709 - 0.052 13.7 0.6 0.12 12.6 0.4 1.7 1 1 1 2 2 2 0 OB-fold nucleic acid binding domain LURAP PF14854.6 ORF82709 - 0.12 12.3 4.5 0.22 11.5 2.3 2.1 1 1 1 2 2 2 0 Leucine rich adaptor protein SPATA1_C PF15743.5 ORF82709 - 0.14 12.3 17.4 0.038 14.1 5.3 2.3 1 1 1 2 2 2 0 Spermatogenesis-associated C-terminus BLOC1_2 PF10046.9 ORF82709 - 0.39 11.1 15.1 0.35 11.2 6.5 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Lzipper-MIP1 PF14389.6 ORF82709 - 0.93 9.8 11.0 2.7 8.4 7.3 2.9 1 1 1 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 BST2 PF16716.5 ORF82709 - 3.3 8.3 10.8 0.89 10.2 3.9 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Tropomyosin_1 PF12718.7 ORF82709 - 6.5 6.9 17.2 1.8e+02 2.2 17.2 2.2 1 1 0 1 1 1 0 Tropomyosin like Cnn_1N PF07989.11 ORF82709 - 9.2 6.5 21.1 5.4 7.3 4.5 3.4 2 1 1 3 3 3 0 Centrosomin N-terminal motif 1 Bud13 PF09736.9 ORF81579 - 0.04 14.3 2.9 0.055 13.9 2.9 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor of RES complex BBS2_N PF14781.6 ORF81579 - 0.11 12.4 1.9 0.19 11.6 1.9 1.3 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Exostosin PF03016.15 ORF81256 - 3.1e-07 29.9 0.0 4e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 Exostosin family Esterase PF00756.20 ORF80339 - 2.1e-32 112.8 0.0 2.6e-32 112.4 0.0 1.0 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF80339 - 0.0033 16.9 0.0 0.0041 16.6 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Chlorophyllase2 PF12740.7 ORF80339 - 0.0042 16.0 0.0 0.0058 15.6 0.0 1.1 1 0 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_3 PF07859.13 ORF80339 - 0.0067 16.3 0.0 0.0082 16.0 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Lipase_3 PF01764.25 ORF80339 - 0.084 12.7 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Lipase (class 3) SAB PF04382.13 ORF80008 - 0.058 13.5 0.1 0.15 12.1 0.1 1.7 1 0 0 1 1 1 0 SAB domain RNA_binding PF01877.17 ORF79325 - 0.062 13.6 5.2 2.1 8.6 0.9 2.4 2 1 0 2 2 2 0 RNA binding DUF1451 PF07295.11 ORF79325 - 0.14 12.2 3.5 3.4 7.7 0.4 2.2 1 1 1 2 2 2 0 Zinc-ribbon containing domain APG5 PF04106.12 ORF79325 - 0.7 9.4 6.3 0.21 11.2 0.4 2.0 2 0 0 2 2 2 0 Autophagy protein Apg5 DUF3731 PF12531.8 ORF79325 - 1.1 9.0 3.6 7.1 6.4 2.7 2.3 1 1 1 2 2 2 0 DNA-K related protein UCH PF00443.29 ORF79325 - 3.9 6.9 12.0 0.3 10.5 2.0 2.1 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase EF-hand_6 PF13405.6 ORF79151 - 0.029 14.3 0.1 0.14 12.2 0.1 2.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 ORF79151 - 0.11 12.2 0.7 0.33 10.6 0.1 2.2 2 0 0 2 2 2 0 EF hand DUF397 PF04149.12 ORF78783 - 0.066 13.3 0.0 0.22 11.6 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF397) Proteasom_PSMB PF10508.9 ORF78104 - 7.4e-12 44.5 0.0 8.8e-12 44.3 0.0 1.0 1 0 0 1 1 1 1 Proteasome non-ATPase 26S subunit MMS22L_C PF14911.6 ORF78104 - 0.025 13.7 0.1 0.15 11.1 0.0 1.9 1 1 1 2 2 2 0 S-phase genomic integrity recombination mediator, C-terminal DUF1087 PF06465.13 ORF77700 - 0.032 14.2 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) Transket_pyr PF02779.24 ORF76617 - 1.2e-44 152.2 0.0 1.3e-44 152.0 0.0 1.0 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain zf-MIZ PF02891.20 ORF76617 - 0.11 12.3 0.1 0.21 11.4 0.1 1.4 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger Lipase_3 PF01764.25 ORF76355 - 2e-18 66.6 0.0 3.1e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 ORF76355 - 0.0075 16.0 0.0 0.0094 15.7 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 ORF76355 - 0.043 13.7 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF76355 - 0.057 12.9 0.0 0.076 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 ORF76355 - 0.099 11.9 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF824 PF05688.11 ORF76355 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) Abhydrolase_1 PF00561.20 ORF76355 - 0.12 12.0 0.0 0.25 10.9 0.0 1.5 2 0 0 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF76355 - 0.13 12.8 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase family Paramyxo_C PF01692.18 ORF75562 - 0.093 12.1 0.6 0.12 11.7 0.4 1.4 1 1 0 1 1 1 0 Paramyxovirus non-structural protein C Spc7 PF08317.11 ORF73707 - 5.6e-05 22.2 23.8 0.0033 16.4 17.2 2.1 1 1 1 2 2 2 2 Spc7 kinetochore protein DUF3450 PF11932.8 ORF73707 - 0.0018 17.6 23.4 0.0031 16.8 7.6 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF3450) DUF3552 PF12072.8 ORF73707 - 0.015 14.7 45.6 0.071 12.5 20.3 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) DUF4200 PF13863.6 ORF73707 - 0.098 13.1 40.7 0.91 9.9 11.0 3.9 1 1 4 5 5 5 0 Domain of unknown function (DUF4200) Golgin_A5 PF09787.9 ORF73707 - 0.1 12.1 26.9 0.12 11.8 26.9 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 TPR_MLP1_2 PF07926.12 ORF73707 - 0.26 11.3 29.6 3.7 7.6 29.1 2.6 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein KASH_CCD PF14662.6 ORF73707 - 1.2 8.9 27.0 0.33 10.8 4.1 2.2 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH APG6_N PF17675.1 ORF73707 - 1.9 9.0 32.6 1.3 9.6 22.4 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region TMPIT PF07851.13 ORF73707 - 2.5 7.3 15.4 0.1 11.8 6.9 2.0 1 1 1 2 2 2 0 TMPIT-like protein DUF4407 PF14362.6 ORF73707 - 3.5 6.9 21.1 4.6 6.5 21.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF73707 - 5.4 6.3 31.2 9.3 5.5 29.3 2.2 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding V_ATPase_I PF01496.19 ORF73707 - 5.7 4.7 15.7 7.5 4.3 15.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Syntaxin-6_N PF09177.11 ORF73707 - 6.3 7.4 18.2 0.47 11.0 10.7 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal HSP70 PF00012.20 ORF73707 - 7.6 4.6 9.3 9.6 4.2 9.3 1.1 1 0 0 1 1 1 0 Hsp70 protein Atg14 PF10186.9 ORF73707 - 9.3 5.2 38.4 2e+02 0.9 38.4 2.1 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks97.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks97.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks97.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks97.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:17:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Fucose_iso_C PF02952.17 ORF7253 - 0.067 12.9 0.1 0.096 12.4 0.1 1.3 1 0 0 1 1 1 0 L-fucose isomerase, C-terminal domain DUF2776 PF10951.8 ORF72236 - 0.072 12.3 0.1 0.087 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) Spc7 PF08317.11 ORF69037 - 5.6e-05 22.2 23.8 0.0033 16.4 17.2 2.1 1 1 1 2 2 2 2 Spc7 kinetochore protein DUF3450 PF11932.8 ORF69037 - 0.0018 17.6 23.4 0.0031 16.8 7.6 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF3450) DUF3552 PF12072.8 ORF69037 - 0.015 14.7 45.6 0.071 12.5 20.3 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) DUF4200 PF13863.6 ORF69037 - 0.098 13.1 40.7 0.91 9.9 11.0 3.9 1 1 4 5 5 5 0 Domain of unknown function (DUF4200) Golgin_A5 PF09787.9 ORF69037 - 0.1 12.1 26.9 0.12 11.8 26.9 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 TPR_MLP1_2 PF07926.12 ORF69037 - 0.26 11.3 29.6 3.7 7.6 29.1 2.6 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein KASH_CCD PF14662.6 ORF69037 - 1.2 8.9 27.0 0.33 10.8 4.1 2.2 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH APG6_N PF17675.1 ORF69037 - 1.9 9.0 32.6 1.3 9.6 22.4 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region TMPIT PF07851.13 ORF69037 - 2.5 7.3 15.4 0.1 11.8 6.9 2.0 1 1 1 2 2 2 0 TMPIT-like protein DUF4407 PF14362.6 ORF69037 - 3.5 6.9 21.1 4.6 6.5 21.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF69037 - 5.4 6.3 31.2 9.3 5.5 29.3 2.2 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding V_ATPase_I PF01496.19 ORF69037 - 5.7 4.7 15.7 7.5 4.3 15.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Syntaxin-6_N PF09177.11 ORF69037 - 6.3 7.4 18.2 0.47 11.0 10.7 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal HSP70 PF00012.20 ORF69037 - 7.6 4.6 9.3 9.6 4.2 9.3 1.1 1 0 0 1 1 1 0 Hsp70 protein Atg14 PF10186.9 ORF69037 - 9.3 5.2 38.4 2e+02 0.9 38.4 2.1 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Ribosomal_L15e PF00827.17 ORF68711 - 1.6e-87 292.2 9.9 1.8e-87 292.0 9.9 1.0 1 0 0 1 1 1 1 Ribosomal L15 Dsh_C PF12316.8 ORF6583 - 0.74 10.2 9.9 0.91 9.9 9.9 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Macoilin PF09726.9 ORF6583 - 5.8 5.3 13.3 6 5.3 13.3 1.0 1 0 0 1 1 1 0 Macoilin family Methyltransf_24 PF13578.6 ORF64539 - 2e-05 25.6 0.0 3e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF64539 - 0.0044 16.2 0.0 0.0082 15.3 0.0 1.5 1 1 0 1 1 1 1 O-methyltransferase TRAM_LAG1_CLN8 PF03798.16 ORF63661 - 6.1e-10 39.2 7.9 6.8e-10 39.0 7.9 1.1 1 0 0 1 1 1 1 TLC domain BCIP PF13862.6 ORF63505 - 0.11 12.2 2.2 0.16 11.8 2.2 1.2 1 0 0 1 1 1 0 p21-C-terminal region-binding protein IQ PF00612.27 ORF63505 - 0.38 10.7 0.1 0.38 10.7 0.1 4.4 5 0 0 5 5 5 0 IQ calmodulin-binding motif OppC_N PF12911.7 ORF63505 - 0.59 10.1 0.1 0.59 10.1 0.1 2.6 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C U3_snoRNA_assoc PF08297.11 ORF63505 - 5 7.9 11.1 1.7 9.4 7.9 2.0 2 1 1 3 3 3 0 U3 snoRNA associated Arm PF00514.23 ORF62398 - 0.0051 16.8 0.6 1.1 9.4 0.1 3.0 2 1 0 2 2 2 2 Armadillo/beta-catenin-like repeat Mo25 PF08569.11 ORF62398 - 0.19 11.0 0.0 0.22 10.9 0.0 1.3 1 1 0 1 1 1 0 Mo25-like Cation_ATPase_N PF00690.26 ORF61952 - 0.08 12.6 0.0 0.15 11.8 0.0 1.6 1 0 0 1 1 1 0 Cation transporter/ATPase, N-terminus Spc7 PF08317.11 ORF61952 - 0.18 10.7 3.6 0.23 10.3 3.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF2405 PF10293.9 ORF61810 - 0.76 9.7 9.8 0.08 12.9 1.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF2405) DUF2776 PF10951.8 ORF61084 - 0.072 12.3 0.1 0.087 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) ABC_membrane PF00664.23 ORF58183 - 3.1e-26 92.7 5.9 4.2e-26 92.2 5.9 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF575 PF04746.12 ORF58183 - 0.091 13.0 0.0 0.18 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF575) HEAT_2 PF13646.6 ORF5428 - 3.7e-18 65.7 6.5 4.4e-10 39.8 0.2 2.8 1 1 2 3 3 3 2 HEAT repeats HEAT PF02985.22 ORF5428 - 9.9e-09 34.7 8.2 1.5 9.3 0.0 6.1 6 0 0 6 6 6 4 HEAT repeat HEAT_PBS PF03130.16 ORF5428 - 1.4e-05 25.3 18.3 1.6 9.6 0.0 6.4 6 1 0 6 6 6 2 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 ORF5428 - 0.00015 22.1 10.7 1.9 9.1 3.1 4.7 3 2 0 3 3 3 3 HEAT-like repeat Arm PF00514.23 ORF5428 - 0.0035 17.3 0.1 0.037 14.1 0.0 2.7 3 0 0 3 3 3 1 Armadillo/beta-catenin-like repeat DUF4231 PF14015.6 ORF54048 - 0.039 14.4 1.4 0.073 13.6 1.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) DUF1129 PF06570.11 ORF54048 - 0.055 12.9 7.6 0.075 12.5 7.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3784 PF12650.7 ORF54048 - 1.3 9.3 11.8 1.1 9.5 8.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3784) CFIA_Pcf11 PF11526.8 ORF53906 - 0.032 14.7 0.0 0.044 14.3 0.0 1.2 1 0 0 1 1 1 0 Subunit of cleavage factor IA Pcf11 Ank_2 PF12796.7 ORF53259 - 6.6e-38 129.2 4.4 4.5e-19 68.8 0.6 2.6 1 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF53259 - 1.7e-35 120.9 1.6 8.8e-11 42.1 0.0 3.6 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF53259 - 1.5e-33 113.7 5.6 4.1e-06 27.0 0.0 6.1 6 0 0 6 6 6 6 Ankyrin repeat Ank_5 PF13857.6 ORF53259 - 7.7e-33 112.1 2.6 1.1e-10 41.5 0.1 5.1 3 2 2 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF53259 - 3.8e-25 85.2 0.3 0.00077 19.7 0.0 6.1 6 0 0 6 6 6 6 Ankyrin repeat YlzJ PF14035.6 ORF53259 - 0.026 14.7 0.0 16 5.8 0.0 3.4 4 1 1 5 5 5 0 YlzJ-like protein HTH_Tnp_Tc3_1 PF11427.8 ORF53259 - 0.093 12.6 1.1 0.42 10.5 0.2 2.3 3 0 0 3 3 3 0 Tc3 transposase Asparaginase_II PF06089.12 ORF53259 - 0.25 10.3 6.1 2.2 7.2 0.1 3.2 1 1 3 4 4 4 0 L-asparaginase II CHAP PF05257.16 ORF53259 - 0.27 11.9 0.6 14 6.4 0.0 3.4 2 2 2 4 4 4 0 CHAP domain EccE PF11203.8 ORF53259 - 2.5 8.5 4.9 27 5.2 0.1 3.4 1 1 2 3 3 3 0 Putative type VII ESX secretion system translocon, EccE Ank_4 PF13637.6 ORF53255 - 7.6e-06 26.4 0.1 0.0042 17.6 0.0 3.3 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF53255 - 4.1e-05 23.8 0.1 0.14 12.7 0.1 3.8 4 0 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF53255 - 6.7e-05 23.0 0.3 0.037 14.6 0.0 3.5 4 1 0 4 4 4 1 Ankyrin repeat Ank_2 PF12796.7 ORF53255 - 8.7e-05 23.0 0.0 0.00024 21.6 0.0 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF53255 - 0.0092 16.3 0.0 0.84 10.0 0.0 2.6 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ependymin PF00811.18 ORF52714 - 0.013 15.8 0.0 0.03 14.6 0.0 1.6 1 1 0 1 1 1 0 Ependymin NCBP3 PF10309.9 ORF52714 - 0.11 12.3 1.5 1.8 8.5 0.1 2.4 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 DUF3150 PF11348.8 ORF52714 - 0.16 11.2 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) FKBP_C PF00254.28 ORF52196 - 2.2e-13 50.3 0.0 3.4e-13 49.7 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Ribosomal_L15e PF00827.17 ORF51951 - 1.6e-87 292.2 9.9 1.8e-87 292.0 9.9 1.0 1 0 0 1 1 1 1 Ribosomal L15 GLTP PF08718.11 ORF50922 - 1.8e-27 96.5 0.0 2.2e-27 96.1 0.0 1.1 1 0 0 1 1 1 1 Glycolipid transfer protein (GLTP) Methyltransf_25 PF13649.6 ORF50670 - 1.7e-07 31.8 0.0 3e-07 31.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF50670 - 2e-07 31.5 0.0 4.3e-07 30.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF50670 - 4.5e-07 29.4 0.0 6.4e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.6 ORF50670 - 0.00019 21.2 0.1 0.0003 20.6 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 ORF50670 - 0.00023 21.1 0.1 0.00061 19.8 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF50670 - 0.0006 19.3 0.0 0.001 18.6 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_12 PF08242.12 ORF50670 - 0.00076 20.2 0.1 0.0015 19.2 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 ORF50670 - 0.00094 18.6 0.0 0.0012 18.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 ORF50670 - 0.00097 18.7 0.0 0.0014 18.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 ORF50670 - 0.0011 18.7 0.0 0.0016 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 ORF50670 - 0.0014 18.5 0.0 0.0014 18.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.13 ORF50670 - 0.0015 18.1 0.0 0.0022 17.5 0.0 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 RrnaAD PF00398.20 ORF50670 - 0.002 17.3 0.0 0.0026 16.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Cons_hypoth95 PF03602.15 ORF50670 - 0.0057 16.3 0.0 0.0086 15.7 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MetW PF07021.12 ORF50670 - 0.01 15.4 0.0 0.014 15.0 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_24 PF13578.6 ORF50670 - 0.017 16.1 0.1 0.032 15.3 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain TSLP PF15216.6 ORF50670 - 0.057 13.7 0.0 0.057 13.7 0.0 1.6 2 0 0 2 2 1 0 Thymic stromal lymphopoietin N6_N4_Mtase PF01555.18 ORF50670 - 0.073 12.8 0.1 0.16 11.7 0.0 1.5 2 0 0 2 2 2 0 DNA methylase UPF0020 PF01170.18 ORF50670 - 0.087 12.5 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_2 PF00891.18 ORF50670 - 0.11 11.8 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 O-methyltransferase domain DHHC PF01529.20 ORF50511 - 5.5e-26 91.2 1.0 8e-26 90.7 1.0 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase Vut_1 PF02592.15 ORF50511 - 0.011 16.1 4.5 0.028 14.7 4.5 1.5 1 1 0 1 1 1 0 Putative vitamin uptake transporter GRA6 PF05084.13 ORF50511 - 7.8 6.4 4.9 3 7.8 0.3 2.0 2 0 0 2 2 2 0 Granule antigen protein (GRA6) KH_1 PF00013.29 ORF50359 - 0.0012 18.6 0.0 0.002 17.9 0.0 1.3 1 0 0 1 1 1 1 KH domain COPIIcoated_ERV PF07970.12 ORF49768 - 7.5e-53 179.6 0.2 8.7e-53 179.4 0.2 1.0 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter Spermine_synth PF01564.17 ORF4861 - 0.045 13.2 0.0 0.064 12.7 0.0 1.2 1 0 0 1 1 1 0 Spermine/spermidine synthase domain Peripla_BP_2 PF01497.18 ORF4811 - 3.1e-24 85.9 0.1 3.5e-24 85.7 0.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein GRAM PF02893.20 ORF46411 - 0.013 15.3 0.0 0.066 13.1 0.0 1.9 2 1 0 2 2 2 0 GRAM domain Sugar_tr PF00083.24 ORF45578 - 1.6e-09 37.2 3.0 1.9e-09 36.9 3.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF45578 - 5.2e-08 32.2 0.9 5.7e-08 32.1 0.9 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4501 PF14946.6 ORF45578 - 2 8.5 3.7 0.61 10.1 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4501) ABC_tran PF00005.27 ORF4445 - 2.3e-11 44.4 0.9 3.4e-11 43.8 0.9 1.3 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF4445 - 0.00061 19.5 0.1 0.0012 18.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 ORF4445 - 0.00069 19.5 3.0 0.0012 18.7 1.4 1.9 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF4445 - 0.0032 17.5 0.0 0.0087 16.1 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF4445 - 0.019 15.4 0.3 0.037 14.5 0.3 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF4445 - 0.02 15.3 0.0 0.041 14.3 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF4445 - 0.029 14.3 0.1 0.051 13.5 0.1 1.5 1 1 0 1 1 1 0 RsgA GTPase SMC_N PF02463.19 ORF4445 - 0.03 13.8 0.0 0.05 13.0 0.0 1.3 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain ATP-synt_ab PF00006.25 ORF4445 - 0.034 13.8 0.4 0.068 12.8 0.2 1.5 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF87 PF01935.17 ORF4445 - 0.052 13.6 0.3 0.12 12.4 0.1 1.6 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_15 PF13175.6 ORF4445 - 0.099 12.3 2.3 0.16 11.7 0.8 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 ORF4445 - 0.11 12.2 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF4445 - 0.13 11.9 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain ribosomal_L24 PF17136.4 ORF44118 - 3.3e-13 49.8 3.9 1.6e-11 44.4 0.7 2.3 2 0 0 2 2 2 2 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 ORF44118 - 0.00045 20.1 0.1 0.0015 18.4 0.0 2.0 2 0 0 2 2 2 1 KOW motif Sec8_exocyst PF04048.14 ORF43753 - 0.37 10.7 9.1 0.51 10.2 1.9 2.5 1 1 2 3 3 3 0 Sec8 exocyst complex component specific domain Ras PF00071.22 ORF41785 - 1.5e-65 219.8 1.4 1.7e-65 219.5 1.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF41785 - 3.3e-36 124.1 0.3 3.3e-36 124.1 0.3 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF41785 - 4.1e-19 68.7 0.4 5.5e-19 68.3 0.4 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF41785 - 1.8e-07 31.2 0.4 3.4e-07 30.3 0.1 1.6 1 1 1 2 2 2 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF41785 - 7.2e-06 26.0 2.8 0.019 14.9 0.1 2.3 1 1 1 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 ORF41785 - 1.4e-05 24.6 0.3 2e-05 24.0 0.3 1.3 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF41785 - 0.0001 21.8 0.2 0.00013 21.5 0.2 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF41785 - 0.00017 21.2 1.0 0.00037 20.1 1.0 1.6 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF41785 - 0.00026 20.6 0.2 0.0022 17.6 0.2 2.2 1 1 0 1 1 1 1 Ferrous iron transport protein B Orbi_VP5 PF00901.17 ORF41785 - 0.0028 16.1 0.2 0.0035 15.8 0.2 1.2 1 0 0 1 1 1 1 Orbivirus outer capsid protein VP5 AAA_16 PF13191.6 ORF41785 - 0.0087 16.5 0.0 0.012 16.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF41785 - 0.013 15.5 0.2 0.081 12.9 0.0 2.1 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF41785 - 0.016 15.4 0.0 0.2 11.9 0.0 2.3 1 1 0 2 2 2 0 AAA domain AAA PF00004.29 ORF41785 - 0.02 15.3 0.1 0.071 13.5 0.0 1.9 1 1 1 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 ORF41785 - 0.03 14.1 2.9 0.13 11.9 2.9 2.1 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF41785 - 0.031 14.0 0.0 0.079 12.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 ORF41785 - 0.073 12.6 0.0 0.19 11.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 ORF41785 - 0.24 11.9 2.1 0.61 10.6 2.1 1.9 1 1 0 1 1 1 0 ABC transporter Sugar_tr PF00083.24 ORF41734 - 7.3e-61 206.4 15.2 8.1e-61 206.2 15.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF41734 - 3.7e-14 52.4 14.1 4e-14 52.3 14.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily SHR3_chaperone PF08229.11 ORF41734 - 0.00045 19.3 2.0 0.0014 17.7 1.9 1.8 1 1 0 1 1 1 1 ER membrane protein SH3 DUF2070 PF09843.9 ORF41734 - 4.3 5.5 8.4 5.7 5.1 8.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) EF-hand_8 PF13833.6 ORF39683 - 0.0002 21.1 0.0 0.00035 20.4 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair ABC_tran PF00005.27 ORF39182 - 2.2e-11 44.4 0.9 3.4e-11 43.8 0.9 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF39182 - 0.0005 20.0 1.4 0.0013 18.6 1.4 1.6 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF39182 - 0.00059 19.5 0.1 0.0012 18.6 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF39182 - 0.0021 18.1 0.8 0.0087 16.1 0.0 2.2 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF39182 - 0.018 15.6 0.3 0.037 14.5 0.3 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF39182 - 0.024 15.0 0.0 0.041 14.3 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain SMC_N PF02463.19 ORF39182 - 0.027 13.9 0.2 0.05 13.0 0.0 1.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 ORF39182 - 0.032 14.2 0.2 0.044 13.7 0.2 1.5 1 1 0 1 1 1 0 RsgA GTPase ATP-synt_ab PF00006.25 ORF39182 - 0.039 13.6 0.2 0.068 12.8 0.2 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF87 PF01935.17 ORF39182 - 0.068 13.2 3.5 0.12 12.4 0.1 2.3 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_30 PF13604.6 ORF39182 - 0.11 12.2 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF39182 - 0.13 11.9 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_15 PF13175.6 ORF39182 - 0.18 11.5 3.6 0.14 11.8 0.7 2.0 2 0 0 2 2 2 0 AAA ATPase domain SIN1 PF05422.12 ORF35488 - 0.051 14.1 0.2 0.073 13.6 0.2 1.4 1 0 0 1 1 1 0 Stress-activated map kinase interacting protein 1 (SIN1) Malic_M PF03949.15 ORF34752 - 5.6e-12 45.5 0.0 3.5e-11 42.9 0.0 1.9 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain Senescence PF06911.12 ORF33996 - 1.8e-09 38.1 1.3 3.4e-09 37.3 1.3 1.4 1 0 0 1 1 1 1 Senescence-associated protein Thyroglobulin_1 PF00086.18 ORF31261 - 0.0079 15.9 1.7 0.015 14.9 1.7 1.6 1 0 0 1 1 1 1 Thyroglobulin type-1 repeat RHH_4 PF13467.6 ORF27732 - 0.044 13.7 0.1 0.13 12.2 0.1 1.7 1 0 0 1 1 1 0 Ribbon-helix-helix domain Indigoidine_A PF04227.12 ORF25960 - 4.6e-78 262.5 0.1 5.2e-78 262.4 0.1 1.0 1 0 0 1 1 1 1 Indigoidine synthase A like protein DUF2815 PF10991.8 ORF25960 - 0.00079 19.4 0.2 0.0012 18.9 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2815) DUF4226 PF10774.9 ORF25960 - 0.095 13.0 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4226) His_Phos_1 PF00300.22 ORF2562 - 6.5e-55 185.9 0.4 7.2e-55 185.7 0.4 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PPTA PF01239.22 ORF2562 - 0.39 10.5 0.1 0.39 10.5 0.1 2.7 3 0 0 3 3 3 0 Protein prenyltransferase alpha subunit repeat Hexapep PF00132.24 ORF22078 - 7.6e-30 101.5 14.4 4.3e-08 32.6 0.3 5.2 2 1 3 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF22078 - 1.8e-11 43.6 18.4 7.8e-07 28.7 0.1 5.8 4 1 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF22078 - 0.0036 16.3 0.0 0.056 12.4 0.0 2.0 2 0 0 2 2 2 1 L-fucokinase DUF4954 PF16314.5 ORF22078 - 0.013 13.7 1.4 0.028 12.5 0.4 1.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4954) Bactofilin PF04519.13 ORF22078 - 0.015 15.6 3.3 0.026 14.8 0.0 2.5 2 1 0 2 2 2 0 Polymer-forming cytoskeletal NAC PF01849.18 ORF20414 - 5e-16 58.4 0.0 1.2e-15 57.2 0.0 1.7 1 0 0 1 1 1 1 NAC domain YqzE PF14038.6 ORF20414 - 0.34 10.9 2.9 0.84 9.7 2.9 1.6 1 0 0 1 1 1 0 YqzE-like protein DUF4637 PF15470.6 ORF20414 - 0.48 10.1 5.7 0.5 10.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4637) DUF3391 PF11871.8 ORF20414 - 1.1 9.8 8.6 1.8 9.1 1.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) Inhibitor_I9 PF05922.16 ORF19880 - 0.19 12.4 1.9 0.24 12.1 0.2 2.0 1 1 1 2 2 2 0 Peptidase inhibitor I9 RHH_4 PF13467.6 ORF18497 - 0.044 13.7 0.1 0.13 12.2 0.1 1.7 1 0 0 1 1 1 0 Ribbon-helix-helix domain fn3_5 PF06280.12 ORF16521 - 0.00025 21.7 0.1 0.41 11.4 0.0 2.3 2 0 0 2 2 2 2 Fn3-like domain ASH PF15780.5 ORF16521 - 0.0014 18.8 0.0 0.15 12.3 0.0 2.4 2 0 0 2 2 2 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin PapD-like PF14874.6 ORF16521 - 0.0033 17.5 0.0 0.0069 16.5 0.0 1.5 1 0 0 1 1 1 1 Flagellar-associated PapD-like MYCBPAP PF14646.6 ORF16521 - 0.027 13.4 0.0 0.03 13.3 0.0 1.2 1 0 0 1 1 1 0 MYCBP-associated protein family PHB_acc_N PF07879.11 ORF16521 - 0.051 13.7 0.1 0.1 12.7 0.1 1.5 1 0 0 1 1 1 0 PHB/PHA accumulation regulator DNA-binding domain DUF1573 PF07610.11 ORF16521 - 0.068 13.2 0.1 1.4 9.0 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1573) Motile_Sperm PF00635.26 ORF16521 - 0.076 12.9 0.2 20 5.1 0.0 2.9 3 0 0 3 3 3 0 MSP (Major sperm protein) domain DUF3361 PF11841.8 ORF16116 - 0.11 12.4 0.0 0.24 11.3 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3361) Dodecin PF07311.12 ORF16116 - 0.12 12.6 0.4 0.34 11.2 0.2 1.7 2 0 0 2 2 2 0 Dodecin RCC1_2 PF13540.6 ORF158 - 3.7e-09 36.2 12.3 0.23 11.3 0.1 4.9 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF158 - 0.0021 18.4 1.4 14 6.1 0.1 3.8 1 1 2 3 3 3 2 TFIIH p62 subunit, N-terminal domain Cerato-platanin PF07249.12 ORF158 - 0.33 11.1 7.2 11 6.2 0.3 3.6 1 1 2 4 4 4 0 Cerato-platanin Spc7 PF08317.11 ORF15519 - 5.6e-05 22.2 23.8 0.0033 16.4 17.2 2.1 1 1 1 2 2 2 2 Spc7 kinetochore protein DUF3450 PF11932.8 ORF15519 - 0.0018 17.6 23.4 0.0031 16.8 7.6 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF3450) DUF3552 PF12072.8 ORF15519 - 0.015 14.7 45.6 0.071 12.5 20.3 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) DUF4200 PF13863.6 ORF15519 - 0.098 13.1 40.7 0.91 9.9 11.0 3.9 1 1 4 5 5 5 0 Domain of unknown function (DUF4200) Golgin_A5 PF09787.9 ORF15519 - 0.1 12.1 26.9 0.12 11.8 26.9 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 TPR_MLP1_2 PF07926.12 ORF15519 - 0.26 11.3 29.6 3.7 7.6 29.1 2.6 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein KASH_CCD PF14662.6 ORF15519 - 1.2 8.9 27.0 0.33 10.8 4.1 2.2 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH APG6_N PF17675.1 ORF15519 - 1.9 9.0 32.6 1.3 9.6 22.4 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region TMPIT PF07851.13 ORF15519 - 2.5 7.3 15.4 0.1 11.8 6.9 2.0 1 1 1 2 2 2 0 TMPIT-like protein DUF4407 PF14362.6 ORF15519 - 3.5 6.9 21.1 4.6 6.5 21.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF15519 - 5.4 6.3 31.2 9.3 5.5 29.3 2.2 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding V_ATPase_I PF01496.19 ORF15519 - 5.7 4.7 15.7 7.5 4.3 15.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Syntaxin-6_N PF09177.11 ORF15519 - 6.3 7.4 18.2 0.47 11.0 10.7 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal HSP70 PF00012.20 ORF15519 - 7.6 4.6 9.3 9.6 4.2 9.3 1.1 1 0 0 1 1 1 0 Hsp70 protein Atg14 PF10186.9 ORF15519 - 9.3 5.2 38.4 2e+02 0.9 38.4 2.1 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 MORN PF02493.20 ORF15403 - 3.1e-22 77.1 16.1 3e-07 29.9 1.9 5.1 4 1 0 4 4 4 4 MORN repeat DUF3048_C PF17479.2 ORF15403 - 0.095 13.1 2.9 0.4 11.1 0.4 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain DUF2776 PF10951.8 ORF15232 - 0.072 12.3 0.1 0.087 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) Dynein_attach_N PF15867.5 ORF15062 - 2.6e-17 62.5 2.5 3.2e-17 62.3 0.3 2.1 2 0 0 2 2 2 1 Dynein attachment factor N-terminus RPAP3_C PF13877.6 ORF15062 - 3.7e-05 24.2 0.0 7.1e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Potential Monad-binding region of RPAP3 SelB-wing_2 PF09106.11 ORF15062 - 0.0074 16.5 0.6 0.031 14.5 0.2 2.2 3 0 0 3 3 3 1 Elongation factor SelB, winged helix ZapB PF06005.12 ORF15004 - 0.038 14.4 0.1 0.058 13.8 0.1 1.3 1 0 0 1 1 1 0 Cell division protein ZapB Pil1 PF13805.6 ORF15004 - 0.04 13.4 0.2 0.085 12.3 0.2 1.4 1 1 1 2 2 2 0 Eisosome component PIL1 Snapin_Pallidin PF14712.6 ORF15004 - 0.059 13.8 0.9 0.11 12.9 0.3 1.7 2 0 0 2 2 2 0 Snapin/Pallidin Spermine_synth PF01564.17 ORF11470 - 1.8e-11 43.8 0.0 2.3e-11 43.5 0.0 1.1 1 0 0 1 1 1 1 Spermine/spermidine synthase domain AfaD PF05775.12 ORF11470 - 0.002 18.5 0.0 0.17 12.3 0.0 2.3 2 0 0 2 2 2 2 Enterobacteria AfaD invasin protein ART PF01129.18 ORF109446 - 2.8e-08 33.3 0.0 3.8e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 ORF109446 - 3.5e-06 26.5 0.0 6.3e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 ADP-ribosyltransferase exoenzyme COX3 PF00510.18 ORF109159 - 1.4e-15 57.8 17.5 1.9e-15 57.4 17.5 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III ACT_6 PF13740.6 ORF109159 - 0.087 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 ACT domain Carb_anhydrase PF00194.21 ORF108074 - 2e-18 66.8 0.1 2.7e-18 66.4 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMEM154 PF15102.6 ORF108074 - 0.002 18.0 0.0 0.0038 17.2 0.0 1.4 1 0 0 1 1 1 1 TMEM154 protein family 7TM_GPCR_Srh PF10318.9 ORF108074 - 0.0073 15.4 0.0 0.011 14.8 0.0 1.2 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srh TMEM52 PF14979.6 ORF108074 - 0.04 13.8 0.3 0.07 13.1 0.3 1.4 1 0 0 1 1 1 0 Transmembrane 52 Pribosyltran_N PF13793.6 ORF108074 - 0.087 12.8 0.0 0.17 11.9 0.0 1.5 1 1 0 1 1 1 0 N-terminal domain of ribose phosphate pyrophosphokinase Lipase_3 PF01764.25 ORF102227 - 2e-18 66.6 0.0 3.1e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 ORF102227 - 0.0075 16.0 0.0 0.0094 15.7 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 ORF102227 - 0.043 13.7 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF102227 - 0.057 12.9 0.0 0.076 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 ORF102227 - 0.099 11.9 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF824 PF05688.11 ORF102227 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) Abhydrolase_1 PF00561.20 ORF102227 - 0.12 12.0 0.0 0.25 10.9 0.0 1.5 2 0 0 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF102227 - 0.13 12.8 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase family WXG100 PF06013.12 ORF101373 - 0.0013 18.9 6.4 0.017 15.4 2.0 2.8 1 1 1 2 2 2 1 Proteins of 100 residues with WXG DUF4407 PF14362.6 ORF101373 - 0.002 17.6 14.2 0.0024 17.3 14.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) BLOC1_2 PF10046.9 ORF101373 - 0.0024 18.1 17.2 0.13 12.5 1.2 3.2 1 1 2 3 3 3 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Tektin PF03148.14 ORF101373 - 0.0038 16.0 15.2 0.098 11.4 0.7 2.2 1 1 1 2 2 2 2 Tektin family GAS PF13851.6 ORF101373 - 0.005 16.2 11.5 0.005 16.2 11.5 2.8 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding Baculo_PEP_C PF04513.12 ORF101373 - 0.0053 16.8 7.2 0.41 10.7 3.3 2.3 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus VPS38 PF17649.1 ORF101373 - 0.015 14.2 11.8 0.019 13.8 11.8 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting 38 Fib_alpha PF08702.10 ORF101373 - 0.017 15.3 12.4 0.017 15.3 12.4 2.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family FlaC_arch PF05377.11 ORF101373 - 0.017 15.5 13.3 3.1 8.3 0.2 3.5 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) HOOK PF05622.12 ORF101373 - 0.02 13.1 20.9 0.006 14.8 18.1 1.5 1 1 0 1 1 1 0 HOOK protein DUF1664 PF07889.12 ORF101373 - 0.03 14.4 12.5 0.76 9.8 0.4 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF885 PF05960.11 ORF101373 - 0.032 13.9 2.3 0.037 13.7 2.3 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) IFT57 PF10498.9 ORF101373 - 0.039 12.9 19.5 0.18 10.7 12.4 2.1 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 MAD PF05557.13 ORF101373 - 0.04 12.3 24.0 0.046 12.1 24.0 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein Filament PF00038.21 ORF101373 - 0.045 13.3 21.5 0.45 10.0 10.3 2.5 1 1 1 2 2 2 0 Intermediate filament protein Plasmid_RAQPRD PF09686.10 ORF101373 - 0.048 13.9 2.0 0.16 12.2 0.9 2.3 1 1 1 2 2 2 0 Plasmid protein of unknown function (Plasmid_RAQPRD) Syntaxin_2 PF14523.6 ORF101373 - 0.059 13.7 22.9 0.073 13.4 13.1 3.1 2 1 1 3 3 3 0 Syntaxin-like protein Laminin_II PF06009.12 ORF101373 - 0.065 13.3 11.4 0.054 13.5 7.0 2.5 1 1 2 3 3 3 0 Laminin Domain II MtrG PF04210.13 ORF101373 - 0.12 12.2 2.1 7.7 6.5 0.1 3.3 2 1 0 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G DUF5082 PF16888.5 ORF101373 - 0.15 12.3 19.3 0.15 12.3 11.2 3.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Tropomyosin_1 PF12718.7 ORF101373 - 0.18 11.9 23.0 0.067 13.4 16.7 2.3 1 1 1 2 2 2 0 Tropomyosin like SlyX PF04102.12 ORF101373 - 0.21 12.3 13.9 0.68 10.6 2.7 4.4 1 1 3 4 4 4 0 SlyX DUF2205 PF10224.9 ORF101373 - 0.22 11.5 10.4 0.76 9.8 2.0 3.5 3 0 0 3 3 3 0 Short coiled-coil protein DotA PF11388.8 ORF101373 - 0.22 11.7 2.2 0.78 10.0 1.1 2.0 1 1 1 2 2 2 0 Phagosome trafficking protein DotA ApoLp-III PF07464.11 ORF101373 - 0.25 11.4 18.5 1.4 9.0 8.4 2.2 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) TPR_MLP1_2 PF07926.12 ORF101373 - 0.26 11.3 19.3 0.61 10.2 12.3 3.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein ApoO PF09769.9 ORF101373 - 0.29 11.1 4.6 13 5.7 1.5 3.0 1 1 1 2 2 2 0 Apolipoprotein O COG2 PF06148.11 ORF101373 - 0.29 11.2 12.4 2.9 8.0 1.1 3.1 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Fungal_trans_2 PF11951.8 ORF101373 - 0.3 9.9 15.9 0.43 9.3 0.8 2.9 1 1 2 3 3 3 0 Fungal specific transcription factor domain DUF4854 PF16146.5 ORF101373 - 0.34 11.3 13.6 0.23 11.8 1.2 3.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4854) NPV_P10 PF05531.12 ORF101373 - 0.35 11.4 10.5 99 3.5 8.3 3.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein TMF_TATA_bd PF12325.8 ORF101373 - 0.35 11.1 14.6 2.8 8.2 0.5 2.5 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Sec8_exocyst PF04048.14 ORF101373 - 0.36 10.7 12.4 0.59 10.0 5.8 2.5 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain Flagellin_N PF00669.20 ORF101373 - 0.38 10.8 9.1 0.33 11.0 6.3 2.1 1 1 1 2 2 2 0 Bacterial flagellin N-terminal helical region ZYG-11_interact PF05884.12 ORF101373 - 0.52 9.7 4.4 0.7 9.3 0.3 2.1 1 1 1 2 2 2 0 Interactor of ZYG-11 DUF489 PF04356.12 ORF101373 - 0.53 10.3 4.1 0.62 10.0 2.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF489) GTP-bdg_M PF16360.5 ORF101373 - 0.58 10.8 8.8 11 6.7 0.2 3.7 3 1 0 3 3 3 0 GTP-binding GTPase Middle Region DUF948 PF06103.11 ORF101373 - 0.6 10.4 4.8 4.3 7.7 2.4 2.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF2730 PF10805.8 ORF101373 - 0.87 9.7 5.1 11 6.1 3.1 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Cep57_MT_bd PF06657.13 ORF101373 - 0.93 10.0 10.6 1.2 9.7 0.6 3.5 1 1 3 4 4 3 0 Centrosome microtubule-binding domain of Cep57 BST2 PF16716.5 ORF101373 - 1 10.0 15.3 0.51 10.9 4.2 3.5 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 Exonuc_VII_L PF02601.15 ORF101373 - 1 8.9 15.0 2.4 7.7 15.0 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit Spc7 PF08317.11 ORF101373 - 1.2 7.9 23.3 0.79 8.5 11.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein HemX PF04375.14 ORF101373 - 1.3 8.3 13.0 1.5 8.0 8.4 2.1 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF2203 PF09969.9 ORF101373 - 1.3 9.7 11.3 1.5 9.5 2.7 2.8 1 1 3 4 4 4 0 Uncharacterized conserved protein (DUF2203) DUF2935 PF11155.8 ORF101373 - 1.5 9.1 11.8 5.2 7.4 6.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) Med29 PF11568.8 ORF101373 - 1.8 8.8 16.5 0.21 11.8 5.8 2.8 1 1 1 2 2 2 0 Mediator complex subunit 29 TMPIT PF07851.13 ORF101373 - 2 7.6 21.2 1.5 8.0 9.5 2.1 1 1 1 2 2 2 0 TMPIT-like protein Rx_N PF18052.1 ORF101373 - 2 8.7 9.8 7.6 6.9 0.4 3.1 1 1 2 3 3 3 0 Rx N-terminal domain XhlA PF10779.9 ORF101373 - 2.2 8.5 24.9 0.66 10.2 0.2 4.3 1 1 4 5 5 5 0 Haemolysin XhlA Prominin PF05478.11 ORF101373 - 2.2 6.1 13.6 2 6.2 8.8 1.6 1 1 0 1 1 1 0 Prominin Seryl_tRNA_N PF02403.22 ORF101373 - 2.5 8.3 19.3 0.49 10.6 9.0 2.9 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Jnk-SapK_ap_N PF09744.9 ORF101373 - 3.1 8.0 22.8 1.4 9.2 8.7 2.6 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 KAR PF15222.6 ORF101373 - 3.2 8.1 10.9 3.5 8.0 6.9 2.2 1 1 1 2 2 2 0 Kidney androgen-regulated Syntaxin-6_N PF09177.11 ORF101373 - 3.6 8.2 15.0 7.8 7.1 4.5 2.7 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Cob_adeno_trans PF01923.18 ORF101373 - 4 7.6 7.0 13 5.9 1.4 2.3 1 1 2 3 3 3 0 Cobalamin adenosyltransferase OmpH PF03938.14 ORF101373 - 4.3 7.7 21.8 1.3 9.4 7.7 2.7 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) DUF3810 PF12725.7 ORF101373 - 4.4 6.6 10.6 2 7.7 8.3 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3810) YtxH PF12732.7 ORF101373 - 5.6 7.6 11.8 2.3e+03 -0.8 11.8 3.4 1 1 0 1 1 1 0 YtxH-like protein APG6_N PF17675.1 ORF101373 - 5.7 7.5 24.1 1.2 9.7 9.1 2.6 1 1 1 2 2 2 0 Apg6 coiled-coil region Lipase_3 PF01764.25 ORF100405 - 2e-18 66.6 0.0 3.1e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 ORF100405 - 0.0075 16.0 0.0 0.0094 15.7 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 ORF100405 - 0.043 13.7 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF100405 - 0.057 12.9 0.0 0.076 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 ORF100405 - 0.099 11.9 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF824 PF05688.11 ORF100405 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) Abhydrolase_1 PF00561.20 ORF100405 - 0.12 12.0 0.0 0.25 10.9 0.0 1.5 2 0 0 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF100405 - 0.13 12.8 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase family EP400_N PF15790.5 NODE_35541_length_607_cov_2.620629_g28494_i0reverse_frame_1 - 0.16 10.8 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal Catalase PF00199.19 NODE_35541_length_607_cov_2.620629_g28494_i0forward_frame_1 - 2.8e-24 85.9 0.0 3.5e-24 85.6 0.0 1.1 1 0 0 1 1 1 1 Catalase OEP PF02321.18 NODE_35537_length_607_cov_3.197552_g28490_i0reverse_frame_1 - 4.5e-09 36.4 0.6 7.3e-09 35.7 0.6 1.3 1 1 0 1 1 1 1 Outer membrane efflux protein RLAN PF14401.6 NODE_35513_length_607_cov_138.414336_g28467_i0forward_frame_1 - 0.019 14.6 0.1 0.03 14.0 0.1 1.2 1 0 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain Fucosidase_C PF16757.5 NODE_35478_length_608_cov_3.692845_g28440_i0reverse_frame_1 - 0.025 15.1 0.6 0.05 14.2 0.4 1.6 2 0 0 2 2 2 0 Alpha-L-fucosidase C-terminal domain Albumin_I PF08027.11 NODE_35460_length_608_cov_106.902269_g28422_i0forward_frame_1 - 0.031 13.9 2.0 0.13 11.9 2.0 2.1 1 0 0 1 1 1 0 Albumin I chain b Pox_TAP PF03355.14 NODE_35456_length_608_cov_129.759162_g28420_i0forward_frame_1 - 0.066 12.8 0.1 0.092 12.3 0.1 1.2 1 0 0 1 1 1 0 Viral Trans-Activator Protein Goodbye PF17109.5 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_1 - 0.3 11.6 2.9 0.56 10.7 2.9 1.4 1 0 0 1 1 1 0 fungal STAND N-terminal Goodbye domain Kazal_2 PF07648.15 NODE_35414_length_609_cov_92.487805_g28381_i0forward_frame_1 - 0.32 11.2 6.2 0.27 11.4 3.4 2.2 2 0 0 2 2 2 0 Kazal-type serine protease inhibitor domain TPR_2 PF07719.17 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 2.5e-12 45.9 0.2 0.00071 19.5 0.0 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 9.6e-11 42.0 3.7 8.8e-08 32.5 0.8 3.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 9.3e-10 38.7 0.1 4.8e-05 23.6 0.1 3.4 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 6e-09 35.4 0.6 0.091 13.0 0.0 3.9 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 4.9e-08 32.5 3.6 0.062 13.1 0.0 3.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 2.5e-07 30.9 2.2 0.054 14.3 0.0 4.4 3 1 2 5 5 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 5.1e-07 29.3 0.3 0.0032 17.1 0.6 2.6 2 0 0 2 2 2 2 TPR repeat TPR_7 PF13176.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 6.9e-07 28.9 0.1 0.2 11.8 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 3.4e-05 24.4 0.0 0.0066 17.1 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 9.1e-05 22.6 0.1 0.00031 20.9 0.1 2.0 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.00031 21.2 0.4 2.2 9.1 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.00082 19.2 0.8 20 5.2 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat Sel1 PF08238.12 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.0044 17.6 0.2 4.3 8.2 0.0 3.3 4 0 0 4 4 4 1 Sel1 repeat TPR_9 PF13371.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.0057 16.8 0.0 0.33 11.1 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.022 14.8 0.1 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_17 PF13431.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.088 13.2 0.4 9.2 6.9 0.3 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_20 PF14561.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.18 12.2 1.8 0.56 10.6 0.3 2.5 2 1 2 4 4 4 0 Tetratricopeptide repeat NAR PF16251.5 NODE_35364_length_610_cov_13.269565_g28338_i0reverse_frame_2 - 0.12 13.0 0.1 0.24 12.1 0.1 1.4 1 0 0 1 1 1 0 Nucleic acid-binding domain (NAR) Iron_permease PF04120.12 NODE_35364_length_610_cov_13.269565_g28338_i0reverse_frame_2 - 0.84 9.4 5.2 0.2 11.4 1.4 1.8 2 0 0 2 2 2 0 Low affinity iron permease Retrotrans_gag PF03732.17 NODE_35358_length_610_cov_67.730435_g28332_i0forward_frame_3 - 0.051 13.8 0.2 0.096 13.0 0.2 1.6 1 0 0 1 1 1 0 Retrotransposon gag protein LAGLIDADG_3 PF14528.6 NODE_35358_length_610_cov_67.730435_g28332_i0forward_frame_3 - 0.2 12.0 1.7 0.24 11.7 0.4 1.9 2 1 0 2 2 2 0 LAGLIDADG-like domain CARD_2 PF16739.5 NODE_35343_length_610_cov_247.720000_g26923_i1reverse_frame_2 - 0.33 11.0 2.9 1.9 8.5 0.1 2.8 3 0 0 3 3 3 0 Caspase recruitment domain DUF2892 PF11127.8 NODE_35320_length_611_cov_3.185764_g28299_i0forward_frame_3 - 0.029 14.4 3.4 0.51 10.4 0.3 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) Herpes_US9 PF06072.11 NODE_35320_length_611_cov_3.185764_g28299_i0forward_frame_3 - 0.048 13.5 1.1 0.098 12.5 0.2 1.9 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 DUF4094 PF13334.6 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_2 - 0.0097 16.3 1.5 0.02 15.3 1.5 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4094) Spore_YabQ PF09578.10 NODE_35305_length_611_cov_86.802083_g28284_i0reverse_frame_3 - 0.035 14.3 0.6 0.065 13.5 0.5 1.5 1 1 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) DNA_pol3_a_NI PF14480.6 NODE_35272_length_612_cov_2.188908_g28257_i0forward_frame_2 - 0.0047 16.9 2.4 0.0069 16.4 0.3 2.4 2 2 0 2 2 2 1 DNA polymerase III polC-type N-terminus I Exonuc_VII_L PF02601.15 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.0088 15.6 5.3 0.011 15.4 5.3 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit DUF5446 PF17522.2 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.021 15.0 5.6 0.051 13.8 0.4 2.7 3 0 0 3 3 3 0 Family of unknown function (DUF5446) Vps51 PF08700.11 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.023 14.8 1.8 0.023 14.8 1.8 2.8 3 0 0 3 3 3 0 Vps51/Vps67 DUF3347 PF11827.8 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.026 14.7 10.2 0.025 14.7 6.2 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) SlyX PF04102.12 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.062 13.9 4.5 4.5 7.9 0.2 3.0 3 1 0 3 3 2 0 SlyX Spectrin PF00435.21 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.18 12.3 5.4 2.9 8.4 0.1 3.1 3 0 0 3 3 3 0 Spectrin repeat Cob_adeno_trans PF01923.18 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.21 11.7 2.2 0.39 10.8 0.5 2.0 1 1 1 2 2 2 0 Cobalamin adenosyltransferase Cnl2_NKP2 PF09447.10 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.25 11.5 2.5 3.6 7.8 0.9 2.6 2 0 0 2 2 2 0 Cnl2/NKP2 family protein Prefoldin PF02996.17 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.33 10.9 10.2 5.7 6.9 0.1 3.8 2 1 2 4 4 4 0 Prefoldin subunit Tup_N PF08581.10 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.54 10.6 8.6 1.2 9.5 1.1 3.4 3 0 0 3 3 3 0 Tup N-terminal TMPIT PF07851.13 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.59 9.3 7.3 0.95 8.6 1.3 2.1 1 1 0 2 2 2 0 TMPIT-like protein CC2-LZ PF16516.5 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 1 9.8 10.6 1.3 9.4 0.2 3.5 2 1 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF4407 PF14362.6 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 1.4 8.2 9.9 1 8.6 4.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) TolA_bind_tri PF16331.5 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 2.2 8.4 6.4 3.5 7.8 0.7 2.8 3 1 0 3 3 2 0 TolA binding protein trimerisation CCDC84 PF14968.6 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 2.5 7.6 8.2 3.5 7.1 7.1 1.5 1 1 1 2 2 2 0 Coiled coil protein 84 DUF2203 PF09969.9 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 2.9 8.6 8.5 31 5.3 0.2 3.1 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) DUF1664 PF07889.12 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 3.4 7.7 13.3 4.3 7.4 3.2 3.1 2 1 0 3 3 3 0 Protein of unknown function (DUF1664) Csm1_N PF18504.1 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 3.9 7.9 14.5 5.1 7.5 0.5 3.4 3 1 0 3 3 3 0 Csm1 N-terminal domain GLE1 PF07817.13 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 5.3 6.2 10.2 0.36 10.0 0.1 2.4 1 1 2 3 3 3 0 GLE1-like protein V_ATPase_I PF01496.19 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 5.6 4.8 10.6 12 3.7 10.6 1.5 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family CAP_GLY PF01302.25 NODE_35262_length_612_cov_65.625650_g28248_i0reverse_frame_3 - 4.3e-17 61.9 0.4 7.5e-17 61.1 0.4 1.3 1 0 0 1 1 1 1 CAP-Gly domain TRADD_N PF09034.10 NODE_35261_length_612_cov_68.301560_g28247_i0reverse_frame_2 - 0.043 13.9 0.9 0.22 11.6 0.1 2.2 1 1 1 2 2 2 0 TRADD, N-terminal domain DUF4710 PF15828.5 NODE_35259_length_612_cov_70.353553_g28245_i0reverse_frame_2 - 0.076 13.1 3.5 0.22 11.7 3.5 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) p53-inducible11 PF14936.6 NODE_35257_length_612_cov_84.681109_g28243_i0reverse_frame_3 - 1.5 8.8 7.5 0.1 12.6 2.3 1.7 2 0 0 2 2 2 0 Tumour protein p53-inducible protein 11 Spc7 PF08317.11 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.00018 20.5 17.9 0.00022 20.2 17.9 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein SlyX PF04102.12 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.016 15.8 5.1 0.016 15.8 5.1 2.6 2 1 1 3 3 3 0 SlyX UvrD_C PF13361.6 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.025 14.0 13.4 0.028 13.8 13.4 1.1 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain HAUS5 PF14817.6 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.032 13.0 12.0 0.039 12.7 12.0 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 5 V_ATPase_I PF01496.19 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.053 11.4 16.8 0.063 11.2 16.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FapA PF03961.13 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.16 10.6 12.8 0.18 10.4 12.8 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.18 10.8 16.0 0.22 10.6 16.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.28 10.7 10.8 0.32 10.5 10.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit HSP70 PF00012.20 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.29 9.3 13.2 0.33 9.1 13.2 1.2 1 0 0 1 1 1 0 Hsp70 protein DUF4407 PF14362.6 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.7 9.2 6.5 0.8 9.0 6.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1845 PF08900.11 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 0.9 9.2 8.3 1.1 9.0 1.7 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF1845) AAA_11 PF13086.6 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 1 9.1 11.3 1.2 8.9 11.3 1.2 1 0 0 1 1 1 0 AAA domain Glyco_hydro_65m PF03632.15 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 1.2 7.9 12.1 1.4 7.6 12.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 65 central catalytic domain ALMT PF11744.8 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 5.9 5.6 11.7 6.6 5.4 11.7 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF4337 PF14235.6 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 6.5 6.9 16.8 7.8 6.6 16.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) DUF1664 PF07889.12 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 9 6.4 14.4 17 5.4 14.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Presenilin PF01080.17 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 9.6 4.8 8.9 10 4.7 8.9 1.1 1 0 0 1 1 1 0 Presenilin PTPlike_phytase PF14566.6 NODE_35257_length_612_cov_84.681109_g28243_i0forward_frame_3 - 9.8 6.3 15.6 65 3.6 15.6 2.0 1 1 0 1 1 1 0 Inositol hexakisphosphate PHD PF00628.29 NODE_35245_length_612_cov_124.194107_g28232_i0forward_frame_3 - 7.4e-10 38.6 8.8 7.4e-10 38.6 8.8 2.1 2 0 0 2 2 2 1 PHD-finger Zf_RING PF16744.5 NODE_35245_length_612_cov_124.194107_g28232_i0forward_frame_3 - 0.12 12.5 10.1 0.17 12.0 5.6 2.5 2 1 0 2 2 2 0 KIAA1045 RING finger Rpr2 PF04032.16 NODE_35245_length_612_cov_124.194107_g28232_i0forward_frame_3 - 0.23 11.8 8.2 0.061 13.6 4.5 1.9 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-HC5HC2H PF13771.6 NODE_35245_length_612_cov_124.194107_g28232_i0forward_frame_3 - 2.3 8.6 13.5 0.27 11.5 6.6 2.7 2 1 1 3 3 3 0 PHD-like zinc-binding domain Troponin PF00992.20 NODE_35243_length_612_cov_205.318891_g28231_i0reverse_frame_2 - 0.00018 21.8 5.6 0.00018 21.8 5.6 2.2 2 1 0 2 2 2 1 Troponin IF3_C PF00707.22 NODE_35243_length_612_cov_205.318891_g28231_i0reverse_frame_2 - 0.00081 19.3 0.1 0.0018 18.2 0.1 1.7 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain Cep57_CLD_2 PF14197.6 NODE_35243_length_612_cov_205.318891_g28231_i0reverse_frame_2 - 0.0037 17.3 16.5 0.0037 17.3 16.5 2.7 2 1 0 2 2 2 1 Centrosome localisation domain of PPC89 HHV-5_US34A PF17087.5 NODE_35243_length_612_cov_205.318891_g28231_i0reverse_frame_2 - 0.091 12.9 0.8 0.091 12.9 0.8 3.0 2 2 0 2 2 2 0 Herpesvirus US34A protein family YabA PF06156.13 NODE_35243_length_612_cov_205.318891_g28231_i0reverse_frame_2 - 0.22 12.2 11.3 0.96 10.1 0.8 2.6 1 1 1 2 2 2 0 Initiation control protein YabA Fez1 PF06818.15 NODE_35243_length_612_cov_205.318891_g28231_i0reverse_frame_2 - 0.7 10.3 16.4 0.23 11.9 13.2 1.6 1 1 1 2 2 2 0 Fez1 Sec8_exocyst PF04048.14 NODE_35243_length_612_cov_205.318891_g28231_i0reverse_frame_2 - 0.79 9.6 5.9 6 6.7 0.1 3.0 1 1 1 3 3 3 0 Sec8 exocyst complex component specific domain Spc7 PF08317.11 NODE_35243_length_612_cov_205.318891_g28231_i0reverse_frame_2 - 3.9 6.3 15.9 1.4 7.7 5.3 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein IMUP PF15761.5 NODE_35242_length_612_cov_213.783362_g26004_i1reverse_frame_3 - 0.0029 18.3 3.5 0.0029 18.3 3.5 3.3 2 1 1 3 3 3 1 Immortalisation up-regulated protein CCSAP PF15748.5 NODE_35242_length_612_cov_213.783362_g26004_i1reverse_frame_3 - 7.8 6.6 28.0 11 6.1 28.0 1.3 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated Ricin_B_lectin PF00652.22 NODE_35238_length_612_cov_267.712305_g28228_i0reverse_frame_2 - 5e-08 33.2 0.2 4e-05 23.9 0.2 2.2 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain GPR15L PF15854.5 ORF99302 - 0.57 10.4 3.6 1.6 9.0 3.6 1.7 1 1 0 1 1 1 0 G-protein coupled receptor ligand 15 Hydrolase PF00702.26 ORF96179 - 1e-17 65.2 0.0 1.4e-17 64.7 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF96179 - 7.5e-08 32.4 1.4 1.2e-05 25.2 0.2 2.2 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF96179 - 0.013 15.9 0.0 0.043 14.2 0.0 1.8 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase EF-hand_6 PF13405.6 ORF94885 - 3.5e-11 42.1 0.1 8.8e-05 22.1 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF94885 - 4e-08 32.3 0.3 0.00092 18.6 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF94885 - 1.6e-07 31.6 0.5 3.1e-07 30.8 0.5 1.5 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF94885 - 1e-05 24.8 0.1 0.19 11.3 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF94885 - 0.00026 20.8 0.0 0.00054 19.8 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair PCP PF02429.15 ORF93897 - 1.5e-62 210.2 8.5 1.9e-62 209.9 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF93897 - 0.053 13.9 2.8 0.074 13.4 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF732) EF-hand_6 PF13405.6 ORF9354 - 3.5e-11 42.1 0.1 8.8e-05 22.1 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF9354 - 4e-08 32.3 0.3 0.00092 18.6 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF9354 - 1.6e-07 31.6 0.5 3.1e-07 30.8 0.5 1.5 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF9354 - 1e-05 24.8 0.1 0.19 11.3 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF9354 - 0.00026 20.8 0.0 0.00054 19.8 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair Nup35_RRM PF05172.13 ORF92914 - 3.3e-09 36.6 0.0 1.5e-08 34.5 0.0 1.8 1 1 0 1 1 1 1 Nup53/35/40-type RNA recognition motif Nup35_RRM_2 PF14605.6 ORF92914 - 4.1e-05 23.5 0.0 6.5e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif ABC_tran PF00005.27 ORF91660 - 2.6e-18 66.9 0.0 4.9e-18 66.0 0.0 1.4 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF91660 - 0.022 14.2 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF91660 - 0.057 13.7 0.3 0.44 10.8 0.3 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TBCC PF07986.12 ORF90435 - 0.00086 19.0 0.0 0.0015 18.3 0.0 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C SH3_9 PF14604.6 ORF8860 - 0.00022 21.0 1.0 0.00022 21.0 1.0 2.0 2 1 0 2 2 2 1 Variant SH3 domain SH3_1 PF00018.28 ORF8860 - 0.0068 16.0 1.3 0.016 14.8 1.3 1.7 1 1 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 ORF8860 - 0.015 15.0 0.0 0.026 14.2 0.0 1.4 1 0 0 1 1 1 0 Variant SH3 domain Sugar_tr PF00083.24 ORF8850 - 9e-11 41.3 1.1 1.4e-09 37.4 1.1 2.0 1 1 0 1 1 1 1 Sugar (and other) transporter SOUL PF04832.12 ORF8850 - 0.14 12.3 0.1 0.22 11.7 0.1 1.5 1 1 0 1 1 1 0 SOUL heme-binding protein S_4TM PF18159.1 ORF8850 - 0.15 11.3 0.4 0.29 10.4 0.0 1.7 2 0 0 2 2 2 0 SMODS-associating 4TM effector domain ABC_tran PF00005.27 ORF8577 - 2.9e-09 37.5 1.7 3.2e-09 37.4 0.3 1.8 2 1 0 2 2 2 1 ABC transporter ABC_membrane PF00664.23 ORF8577 - 3.5e-05 23.6 1.0 5.6e-05 22.9 1.0 1.4 1 1 0 1 1 1 1 ABC transporter transmembrane region AAA_29 PF13555.6 ORF8577 - 0.0026 17.4 0.1 0.26 11.0 0.0 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF8577 - 0.034 14.2 0.2 0.099 12.7 0.1 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase DUF4380 PF14315.6 ORF84903 - 0.052 12.5 0.1 0.074 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4380) DUF973 PF06157.11 ORF84878 - 0.17 10.9 0.0 0.24 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) UDPGT PF00201.18 ORF82628 - 1e-13 50.9 0.0 1.2e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF82628 - 6.6e-06 26.2 0.0 7.6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF82628 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 Tox-REase-2 PF15646.6 ORF81947 - 0.18 12.0 2.7 0.28 11.4 2.7 1.2 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 DNA_methylase PF00145.17 ORF79851 - 0.0047 16.3 0.0 0.1 11.9 0.0 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase DNA_methylase PF00145.17 ORF79799 - 0.0047 16.3 0.0 0.1 11.9 0.0 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase Nudix_N_2 PF14803.6 ORF77309 - 1.1 9.3 12.8 3 7.8 1.6 3.6 3 0 0 3 3 3 0 Nudix N-terminal Carb_anhydrase PF00194.21 ORF76867 - 6.5e-20 71.7 0.1 8.6e-20 71.3 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMEM132D_C PF15706.5 ORF76867 - 0.0012 18.5 1.2 0.0084 15.9 0.2 2.2 2 0 0 2 2 2 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TMEM154 PF15102.6 ORF76867 - 0.0068 16.3 0.0 0.018 15.0 0.0 1.6 1 1 1 2 2 2 1 TMEM154 protein family Acatn PF13000.7 ORF74765 - 2.8e-40 138.4 14.2 1.5e-39 136.0 14.2 1.8 1 1 0 1 1 1 1 Acetyl-coenzyme A transporter 1 MFS_1 PF07690.16 ORF74765 - 4.2e-05 22.6 6.8 5.1e-05 22.4 6.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily LIDHydrolase PF10230.9 ORF74765 - 0.098 12.2 0.1 0.3 10.6 0.0 1.9 2 0 0 2 2 2 0 Lipid-droplet associated hydrolase DUF2157 PF09925.9 ORF74765 - 6.6 6.5 9.2 0.1 12.4 1.8 1.7 3 0 0 3 3 3 0 Predicted membrane protein (DUF2157) DUF2119 PF09892.9 ORF74670 - 0.017 14.6 0.0 0.023 14.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2119) TMP_2 PF06791.13 ORF74670 - 0.029 14.0 4.7 0.052 13.2 4.7 1.4 1 0 0 1 1 1 0 Prophage tail length tape measure protein Med3 PF11593.8 ORF74670 - 0.05 12.8 11.8 0.055 12.7 11.8 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal CtaG_Cox11 PF04442.14 ORF74670 - 0.082 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 WD40 PF00400.32 ORF74023 - 0.00041 21.1 0.0 0.11 13.4 0.0 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF1180 PF06679.12 ORF73326 - 0.83 10.1 4.2 9.5 6.6 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1180) UDPGT PF00201.18 ORF72677 - 1e-13 50.9 0.0 1.2e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF72677 - 6.6e-06 26.2 0.0 7.6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF72677 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 UDPGT PF00201.18 ORF72322 - 1e-13 50.9 0.0 1.2e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF72322 - 6.6e-06 26.2 0.0 7.6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF72322 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 Thioredoxin_2 PF13098.6 ORF71715 - 3.4e-09 37.1 0.0 1.1e-08 35.4 0.0 1.8 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 ORF71715 - 7.9e-07 29.0 0.0 1.9e-05 24.6 0.0 2.1 1 1 0 1 1 1 1 Thioredoxin TraF PF13728.6 ORF71715 - 0.00017 21.5 0.0 0.00047 20.1 0.0 1.7 1 1 0 1 1 1 1 F plasmid transfer operon protein Glutaredoxin PF00462.24 ORF71715 - 0.013 15.7 0.1 0.029 14.6 0.0 1.6 2 0 0 2 2 2 0 Glutaredoxin DUF836 PF05768.14 ORF71715 - 0.017 15.6 0.0 0.027 14.9 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Thioredoxin_3 PF13192.6 ORF71715 - 0.14 12.2 0.0 0.77 9.9 0.0 2.1 1 1 0 1 1 1 0 Thioredoxin domain DSBA PF01323.20 ORF71715 - 0.17 11.6 0.0 2.1 8.1 0.0 2.2 2 0 0 2 2 2 0 DSBA-like thioredoxin domain DNA_methylase PF00145.17 ORF70769 - 0.0047 16.3 0.0 0.1 11.9 0.0 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase Nitroreductase PF00881.24 ORF70706 - 0.067 13.2 0.3 0.094 12.8 0.3 1.3 1 0 0 1 1 1 0 Nitroreductase family Glycos_trans_3N PF02885.17 ORF70706 - 0.072 12.9 0.2 0.12 12.2 0.2 1.3 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain DnaJ PF00226.31 ORF70311 - 4e-21 74.9 0.7 6.1e-21 74.3 0.7 1.3 1 0 0 1 1 1 1 DnaJ domain DnaJ_C PF01556.18 ORF70311 - 0.0011 19.1 0.1 0.0017 18.4 0.1 1.3 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.19 ORF70311 - 0.0038 17.6 0.8 0.0038 17.6 0.8 1.6 2 0 0 2 2 2 1 DnaJ central domain SAPS PF04499.15 ORF70021 - 0.5 9.1 1.8 0.61 8.8 1.8 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein adh_short PF00106.25 ORF69053 - 5e-15 55.5 0.0 6.3e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF69053 - 1.1e-10 41.5 0.0 1.3e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Herpes_LMP2 PF07415.11 ORF68586 - 0.01 14.6 0.1 0.015 14.2 0.1 1.2 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein Mt_ATP-synt_B PF05405.14 ORF67050 - 0.11 12.1 6.0 0.044 13.4 3.2 1.7 2 0 0 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) PCP PF02429.15 ORF66501 - 1.5e-62 210.2 8.5 1.9e-62 209.9 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF66501 - 0.053 13.9 2.8 0.074 13.4 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF732) Sec1 PF00995.23 ORF66123 - 1.1e-11 44.7 0.3 1.3e-11 44.5 0.3 1.1 1 0 0 1 1 1 1 Sec1 family ECSIT_C PF14784.6 ORF66123 - 0.00031 21.1 0.2 0.00066 20.0 0.1 1.6 1 1 0 1 1 1 1 C-terminal domain of the ECSIT protein DUF5387 PF17361.2 ORF66123 - 0.0011 18.7 0.6 0.0016 18.2 0.6 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5387) Arc_PepC PF06819.11 ORF66123 - 0.04 14.0 0.5 0.093 12.9 0.5 1.6 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminal Domain Staufen_C PF16482.5 ORF66123 - 0.056 13.6 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Staufen C-terminal domain DUF2325 PF10087.9 ORF66123 - 0.098 12.8 0.1 0.28 11.3 0.1 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) ERO1 PF04137.15 ORF64949 - 3e-39 135.2 2.7 3.5e-39 135.0 2.7 1.0 1 0 0 1 1 1 1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) NOG1_N PF17835.1 ORF63469 - 0.0017 18.4 4.8 0.0017 18.4 4.8 1.6 2 0 0 2 2 2 1 NOG1 N-terminal helical domain MAS20 PF02064.15 ORF63469 - 0.012 15.7 1.0 0.023 14.8 1.0 1.5 1 0 0 1 1 1 0 MAS20 protein import receptor AAA_11 PF13086.6 ORF63469 - 0.057 13.2 2.8 0.075 12.8 2.8 1.2 1 0 0 1 1 1 0 AAA domain AAA_lid_10 PF17872.1 ORF63469 - 0.2 11.8 3.7 0.44 10.7 0.0 2.8 2 1 1 3 3 3 0 AAA lid domain YtxH PF12732.7 ORF63469 - 2.3 8.8 7.2 8.6 7.0 4.0 2.8 2 1 0 2 2 2 0 YtxH-like protein TRP PF06011.12 ORF62288 - 3.4e-05 22.8 10.7 4e-05 22.5 10.7 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF4748 PF15932.5 ORF62288 - 0.026 14.3 0.1 0.042 13.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) LYRIC PF15686.5 ORF62230 - 0.042 13.4 3.9 0.05 13.2 3.9 1.1 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family DUF4441 PF14536.6 ORF62230 - 0.13 12.5 6.6 0.24 11.6 6.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) Com_YlbF PF06133.11 ORF62230 - 0.15 12.7 10.8 0.29 11.8 10.3 1.7 1 1 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA Fe_hyd_SSU PF02256.17 ORF62230 - 2.7 8.1 4.9 18 5.5 0.1 2.8 3 0 0 3 3 3 0 Iron hydrogenase small subunit LEDGF PF11467.8 ORF61804 - 0.16 11.6 0.5 0.55 9.9 0.2 1.9 1 1 1 2 2 2 0 Lens epithelium-derived growth factor (LEDGF) MFS_1 PF07690.16 ORF61733 - 6.1e-12 45.1 10.2 8.6e-12 44.6 10.2 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF61733 - 1e-05 24.6 7.3 0.0003 19.8 7.3 2.2 1 1 0 1 1 1 1 Sugar (and other) transporter OATP PF03137.20 ORF61733 - 0.18 10.0 9.1 0.26 9.5 7.8 1.7 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family RelA_SpoT PF04607.17 ORF60066 - 0.097 13.0 1.4 0.13 12.5 0.2 1.9 2 0 0 2 2 2 0 Region found in RelA / SpoT proteins BBP7 PF07585.11 ORF59087 - 0.094 11.9 0.1 0.18 11.0 0.0 1.4 1 1 0 1 1 1 0 Putative beta barrel porin-7 (BBP7) Arrestin_C PF02752.22 ORF55652 - 0.046 14.2 0.0 0.063 13.7 0.0 1.2 1 0 0 1 1 1 0 Arrestin (or S-antigen), C-terminal domain Metallophos_C PF14008.6 ORF54972 - 0.026 15.4 0.9 0.83 10.6 1.1 2.3 2 0 0 2 2 2 0 Iron/zinc purple acid phosphatase-like protein C CxC1 PF18802.1 ORF54972 - 0.051 13.7 0.4 0.12 12.5 0.1 1.8 1 1 1 2 2 2 0 CxC1 like cysteine cluster associated with KDZ transposases AviRa PF11599.8 ORF54972 - 0.13 11.7 1.8 0.18 11.2 1.8 1.1 1 0 0 1 1 1 0 RRNA methyltransferase AviRa DUF4181 PF13789.6 ORF54972 - 0.51 10.6 6.3 0.9 9.8 6.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4181) Apis_Csd PF11671.8 ORF54972 - 0.61 10.1 5.9 0.98 9.4 5.9 1.3 1 0 0 1 1 1 0 Complementary sex determiner protein PCP PF02429.15 ORF52727 - 1.5e-62 210.2 8.5 1.9e-62 209.9 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF52727 - 0.053 13.9 2.8 0.074 13.4 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF732) UcrQ PF02939.16 ORF52451 - 1.7 8.6 5.2 0.46 10.5 0.6 2.4 2 1 1 3 3 3 0 UcrQ family XPC-binding PF09280.11 ORF52451 - 4.5 7.1 17.7 5.5 6.8 7.1 3.6 3 1 1 4 4 4 0 XPC-binding domain PP2C PF00481.21 ORF49720 - 1.4e-37 129.7 0.2 1.7e-37 129.5 0.2 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF49720 - 0.00059 19.5 0.0 0.0015 18.2 0.0 1.6 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF49720 - 0.028 14.4 0.3 0.16 11.9 0.2 1.9 2 0 0 2 2 2 0 Stage II sporulation protein E (SpoIIE) PCP PF02429.15 ORF49339 - 1.5e-62 210.2 8.5 1.9e-62 209.9 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF49339 - 0.053 13.9 2.8 0.074 13.4 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF732) PKcGMP_CC PF16808.5 ORF48926 - 0.34 10.8 5.7 2.3 8.2 2.0 2.2 1 1 1 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Kinesin PF00225.23 ORF48484 - 5.8e-56 189.8 2.4 6.3e-56 189.7 2.4 1.0 1 0 0 1 1 1 1 Kinesin motor domain NTF-like PF14540.6 ORF48484 - 0.0045 16.7 0.1 0.0078 16.0 0.1 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase-like tRNA_synt_1c_R1 PF04558.15 ORF48484 - 0.014 15.4 0.5 0.02 14.9 0.5 1.4 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ATP-grasp_3 PF02655.14 ORF48484 - 0.017 15.1 0.1 0.11 12.5 0.0 2.0 2 0 0 2 2 2 0 ATP-grasp domain VCBS PF13517.6 ORF46595 - 0.034 14.7 0.2 0.076 13.6 0.2 1.6 1 0 0 1 1 1 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella Saf_2TM PF18303.1 ORF46595 - 0.077 12.6 0.5 0.21 11.2 0.1 1.8 3 0 0 3 3 3 0 SAVED-fused 2TM effector domain PCP PF02429.15 ORF45610 - 2.3e-62 209.6 8.3 2.8e-62 209.3 8.3 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF45610 - 0.06 13.7 3.0 0.075 13.4 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF732) adh_short PF00106.25 ORF44068 - 8e-17 61.3 0.0 1e-16 61.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF44068 - 9.9e-11 41.6 0.0 1.2e-10 41.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase PCP PF02429.15 ORF41522 - 1.5e-62 210.2 8.5 1.9e-62 209.9 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF41522 - 0.053 13.9 2.8 0.074 13.4 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF732) DUF3071 PF11268.8 ORF34231 - 0.12 12.4 0.1 0.17 12.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3071) Methyltransf_4 PF02390.17 ORF31009 - 1.4e-21 76.7 0.0 1.8e-21 76.3 0.0 1.1 1 0 0 1 1 1 1 Putative methyltransferase DNA_photolyase PF00875.18 ORF31009 - 0.1 12.6 0.0 4.8 7.2 0.0 2.2 1 1 1 2 2 2 0 DNA photolyase EF-hand_11 PF08976.11 ORF3013 - 0.0018 19.1 0.1 0.0039 18.1 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_6 PF13405.6 ORF3013 - 0.0049 16.7 0.5 0.0049 16.7 0.5 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF3013 - 0.072 12.7 1.4 0.53 10.0 0.2 2.6 2 0 0 2 2 2 0 EF hand FGAR-AT_linker PF18072.1 ORF3013 - 0.081 13.5 0.0 2 9.0 0.0 2.6 2 0 0 2 2 2 0 Formylglycinamide ribonucleotide amidotransferase linker domain TTL PF03133.15 ORF30065 - 2.6e-24 85.9 0.3 3.3e-24 85.5 0.3 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF30065 - 5.2e-06 25.9 0.1 1.2e-05 24.8 0.0 1.5 1 1 1 2 2 2 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF30065 - 1e-05 24.9 0.0 1.7e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp RE_Alw26IDE PF09665.10 ORF30065 - 0.00048 19.4 0.1 0.00049 19.4 0.1 1.2 1 0 0 1 1 1 1 Type II restriction endonuclease (RE_Alw26IDE) Dala_Dala_lig_C PF07478.13 ORF30065 - 0.0033 17.0 0.1 0.0052 16.4 0.1 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Pox_J1 PF03338.15 ORF30065 - 0.057 13.3 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Poxvirus J1 protein Ku_C PF03730.14 ORF30065 - 0.44 11.3 4.6 2.4 8.9 0.1 2.6 3 0 0 3 3 3 0 Ku70/Ku80 C-terminal arm PGAP1 PF07819.13 ORF29810 - 0.052 13.3 0.4 0.052 13.3 0.4 1.7 2 0 0 2 2 2 0 PGAP1-like protein Gly_radical PF01228.21 ORF29810 - 0.14 12.7 5.3 0.056 14.0 1.9 2.0 1 1 1 2 2 2 0 Glycine radical Arc_PepC_II PF06847.11 ORF29810 - 7.4 7.2 7.0 17 6.0 5.3 2.6 1 1 1 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II SNARE PF05739.19 ORF29445 - 4.4e-10 39.4 0.2 1.1e-09 38.1 0.2 1.8 1 0 0 1 1 1 1 SNARE domain Syntaxin PF00804.25 ORF29445 - 0.049 13.3 13.6 26 4.4 13.6 2.3 1 1 0 1 1 1 0 Syntaxin APC_u15 PF16636.5 ORF29445 - 0.35 11.3 6.3 2.1 8.8 1.6 2.6 2 0 0 2 2 2 0 Unstructured region on APC between APC_crr regions 5 and 6 DUF2203 PF09969.9 ORF29445 - 1 10.1 8.5 0.16 12.7 2.1 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) YvrJ PF12841.7 ORF29445 - 2.3 7.8 4.2 4.3 6.9 0.2 2.7 2 0 0 2 2 2 0 YvrJ protein family Trehalose_PPase PF02358.16 ORF29255 - 1.8e-39 135.2 0.0 2.2e-39 135.0 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase Hydrolase_3 PF08282.12 ORF29255 - 0.19 11.4 0.0 0.23 11.2 0.0 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase DUF2157 PF09925.9 ORF27757 - 0.0002 21.2 6.1 0.0089 15.8 6.1 2.1 1 1 0 1 1 1 1 Predicted membrane protein (DUF2157) Ac76 PF05814.11 ORF27757 - 0.019 15.0 1.1 0.019 15.0 1.1 3.8 2 2 1 4 4 4 0 Orf76 (Ac76) FTSW_RODA_SPOVE PF01098.19 ORF27757 - 1 8.2 16.7 86 2.0 16.7 2.1 1 1 0 1 1 1 0 Cell cycle protein 5TM-5TMR_LYT PF07694.12 ORF27757 - 2 7.9 12.9 0.7 9.4 3.8 2.5 2 1 0 2 2 2 0 5TMR of 5TMR-LYT DUF2157 PF09925.9 ORF27744 - 0.0083 15.9 4.7 0.098 12.4 4.7 2.2 1 1 0 1 1 1 1 Predicted membrane protein (DUF2157) Ac76 PF05814.11 ORF27744 - 0.026 14.5 1.6 0.026 14.5 1.6 4.0 2 2 2 4 4 4 0 Orf76 (Ac76) EpsG PF14897.6 ORF27744 - 0.11 11.8 25.8 0.16 11.2 25.8 1.3 1 0 0 1 1 1 0 EpsG family FTSW_RODA_SPOVE PF01098.19 ORF27744 - 1.4 7.8 16.9 0.014 14.4 3.2 2.1 1 1 1 2 2 2 0 Cell cycle protein ADH_zinc_N PF00107.26 ORF26909 - 1.2e-20 73.9 0.3 1.7e-20 73.3 0.3 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF26909 - 5.3e-10 39.1 0.1 6.1e-10 38.9 0.1 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF26909 - 5.4e-10 40.4 0.3 8.2e-10 39.8 0.3 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase PCP PF02429.15 ORF26565 - 1.5e-62 210.2 8.5 1.9e-62 209.9 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF26565 - 0.053 13.9 2.8 0.074 13.4 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF732) Pkinase PF00069.25 ORF24102 - 4.2e-45 154.2 0.0 5.1e-45 153.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24102 - 7.4e-21 74.6 0.0 8.7e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF24102 - 1.4e-06 27.8 0.0 1.9e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF24102 - 4.7e-05 22.8 0.0 6.3e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF24102 - 0.0033 16.4 0.0 0.0039 16.2 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF24102 - 0.014 14.2 0.0 0.02 13.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Neurensin PF14927.6 ORF23584 - 0.011 15.4 0.0 1.8 8.3 0.0 3.0 1 1 2 3 3 3 0 Neurensin CCB2_CCB4 PF11152.8 ORF23584 - 0.081 12.2 0.0 0.14 11.4 0.0 1.4 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B, CCB2/CCB4 UDPGT PF00201.18 ORF23359 - 1e-13 50.9 0.0 1.2e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF23359 - 6.6e-06 26.2 0.0 7.6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF23359 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 BPD_transp_1 PF00528.22 ORF22951 - 7.8e-16 58.4 11.8 1.3e-15 57.6 11.8 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CobW_C PF07683.14 ORF22211 - 0.012 15.5 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Cobalamin synthesis protein cobW C-terminal domain Hydrolase_4 PF12146.8 ORF21765 - 2.7e-09 36.7 0.0 3.4e-08 33.0 0.0 2.1 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF21765 - 3.3e-05 23.4 0.0 0.024 14.1 0.0 2.1 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF21765 - 0.00029 21.5 0.4 0.00035 21.2 0.4 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF21765 - 0.00037 20.2 0.1 0.28 10.8 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold FSH1 PF03959.13 ORF21765 - 0.01 15.5 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 ORF21765 - 0.016 15.3 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein Esterase PF00756.20 ORF21765 - 0.24 11.0 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 Putative esterase Peptidase_S9 PF00326.21 ORF20277 - 4.7e-05 23.0 0.0 0.003 17.1 0.0 2.1 1 1 1 2 2 2 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF20277 - 0.00016 21.1 0.0 0.3 10.3 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 ORF20277 - 0.00022 20.9 0.0 0.00029 20.5 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.13 ORF20277 - 0.0022 17.9 0.0 0.0029 17.5 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_1 PF00561.20 ORF20277 - 0.0027 17.4 0.0 0.076 12.6 0.0 2.0 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF20277 - 0.099 13.2 0.0 0.67 10.5 0.1 1.8 1 1 1 2 2 2 0 Alpha/beta hydrolase family FSH1 PF03959.13 ORF20277 - 0.12 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Serine hydrolase (FSH1) PAF-AH_p_II PF03403.13 ORF20277 - 0.16 10.5 0.0 0.18 10.3 0.0 1.1 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II Peptidase_S15 PF02129.18 ORF20277 - 0.17 11.5 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) CutA1 PF03091.15 ORF17916 - 2e-16 59.6 7.5 2.7e-13 49.6 0.4 3.0 1 1 2 3 3 3 3 CutA1 divalent ion tolerance protein UBX PF00789.20 ORF16625 - 0.028 14.6 0.1 22 5.3 0.0 3.0 1 1 2 3 3 3 0 UBX domain Phage_TTP_12 PF16461.5 ORF16625 - 0.1 12.3 0.0 0.36 10.5 0.0 1.8 1 1 1 2 2 2 0 Lambda phage tail tube protein, TTP UDPGT PF00201.18 ORF16018 - 1e-13 50.9 0.0 1.2e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF16018 - 6.6e-06 26.2 0.0 7.4e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF16018 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 PCP PF02429.15 ORF15541 - 1.5e-62 210.2 8.5 1.9e-62 209.9 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF15541 - 0.053 13.9 2.8 0.074 13.4 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF732) DUF4816 PF16086.5 ORF14834 - 3.6 7.6 6.2 14 5.7 1.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4816) UBX PF00789.20 ORF11590 - 0.028 14.6 0.1 22 5.3 0.0 3.0 1 1 2 3 3 3 0 UBX domain Phage_TTP_12 PF16461.5 ORF11590 - 0.1 12.3 0.0 0.36 10.5 0.0 1.8 1 1 1 2 2 2 0 Lambda phage tail tube protein, TTP Borrelia_P83 PF05262.11 ORF112140 - 0.014 13.9 10.7 0.014 13.9 10.7 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF2118 PF09891.9 ORF112140 - 0.057 13.4 1.3 0.092 12.7 1.3 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) NAD_binding_1 PF00175.21 ORF112140 - 9.7 6.9 8.0 49 4.6 6.1 2.5 2 1 1 3 3 3 0 Oxidoreductase NAD-binding domain Cytochrom_C_2 PF01322.20 ORF111381 - 0.011 16.7 2.6 0.015 16.2 1.6 1.7 1 1 1 2 2 2 0 Cytochrome C' DUF4164 PF13747.6 ORF111381 - 0.11 12.8 1.4 0.17 12.2 1.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4164) Antimicrobial19 PF08225.11 ORF111381 - 0.17 11.5 1.2 0.9 9.2 0.9 2.2 2 0 0 2 2 2 0 Pseudin antimicrobial peptide Prefoldin PF02996.17 ORF111381 - 0.47 10.4 6.1 2 8.3 0.6 2.3 1 1 1 2 2 2 0 Prefoldin subunit TraF_2 PF13729.6 ORF111381 - 3.8 6.8 7.8 0.79 9.0 0.4 2.0 1 1 1 2 2 2 0 F plasmid transfer operon, TraF, protein F5_F8_type_C PF00754.25 ORF111295 - 1.7e-09 37.9 0.8 2.4e-09 37.4 0.8 1.2 1 0 0 1 1 1 1 F5/8 type C domain Glucosamine_iso PF01182.20 ORF11058 - 1.4e-27 97.1 0.0 1.7e-27 96.8 0.0 1.0 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PKcGMP_CC PF16808.5 ORF109450 - 0.34 10.8 5.7 2.3 8.2 2.0 2.2 1 1 1 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Carb_anhydrase PF00194.21 ORF108264 - 6.5e-20 71.7 0.1 8.6e-20 71.3 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMEM132D_C PF15706.5 ORF108264 - 0.0012 18.5 1.2 0.0084 15.9 0.2 2.2 2 0 0 2 2 2 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TMEM154 PF15102.6 ORF108264 - 0.0068 16.3 0.0 0.018 15.0 0.0 1.6 1 1 1 2 2 2 1 TMEM154 protein family CSD PF00313.22 ORF106545 - 2.9e-08 33.5 0.0 4.9e-08 32.7 0.0 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain PCP PF02429.15 ORF105102 - 1.5e-62 210.2 8.5 1.9e-62 209.9 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF105102 - 0.053 13.9 2.8 0.074 13.4 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF732) Ribosomal_S7 PF00177.21 ORF10402 - 6.6e-38 129.7 1.1 8.5e-38 129.3 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e CHD5 PF04420.14 NODE_35682_length_604_cov_53.233743_g28617_i0forward_frame_1 - 1.1 9.1 3.7 1.8 8.4 3.7 1.3 1 0 0 1 1 1 0 CHD5-like protein TIG PF01833.24 NODE_35674_length_604_cov_92.989455_g28609_i0forward_frame_1 - 6.4e-16 58.2 5.5 6.4e-16 58.2 5.5 1.8 2 0 0 2 2 2 1 IPT/TIG domain YDG PF18657.1 NODE_35674_length_604_cov_92.989455_g28609_i0forward_frame_1 - 0.79 10.0 4.4 4.4 7.6 2.7 2.6 2 1 0 2 2 2 0 YDG domain MORN PF02493.20 NODE_35671_length_604_cov_209.652021_g28606_i0reverse_frame_1 - 5.1e-08 32.4 3.5 5.1e-08 32.4 3.5 1.8 2 0 0 2 2 2 1 MORN repeat DUF945 PF06097.11 NODE_35657_length_605_cov_2.892982_g28596_i0reverse_frame_1 - 0.1 11.7 1.5 0.14 11.3 1.5 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF945) DB_JBP1 PF18526.1 NODE_35640_length_605_cov_105.580702_g28579_i0reverse_frame_1 - 0.043 13.8 0.5 0.069 13.1 0.5 1.3 1 0 0 1 1 1 0 Thymine dioxygenase JBP1 DNA-binding domain FAM193_C PF15914.5 NODE_35640_length_605_cov_105.580702_g28579_i0forward_frame_1 - 0.11 12.3 0.0 0.25 11.1 0.0 1.5 1 0 0 1 1 1 0 FAM193 family C-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks98.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks98.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks98.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks98.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:22:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RLI PF04068.15 NODE_35593_length_606_cov_5.420315_g28538_i0reverse_frame_1 - 0.016 15.0 0.2 0.039 13.8 0.2 1.7 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI Lipase_3 PF01764.25 NODE_35593_length_606_cov_5.420315_g28538_i0forward_frame_1 - 6.6e-13 48.7 0.0 1e-12 48.1 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) DUF676 PF05057.14 NODE_35593_length_606_cov_5.420315_g28538_i0forward_frame_1 - 0.025 14.1 0.0 0.035 13.6 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_35593_length_606_cov_5.420315_g28538_i0forward_frame_1 - 0.044 13.5 0.0 0.06 13.1 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein DUF2974 PF11187.8 NODE_35593_length_606_cov_5.420315_g28538_i0forward_frame_1 - 0.093 12.3 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Ras PF00071.22 NODE_35582_length_606_cov_97.760070_g28527_i0forward_frame_1 - 6.6e-17 61.6 0.0 8.5e-17 61.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_35582_length_606_cov_97.760070_g28527_i0forward_frame_1 - 1.1e-05 25.6 0.0 1.6e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Barwin PF00967.17 NODE_35571_length_606_cov_172.616462_g25496_i1reverse_frame_1 - 0.085 12.7 0.4 0.12 12.2 0.4 1.2 1 0 0 1 1 1 0 Barwin family SLATT_5 PF18160.1 NODE_35543_length_607_cov_2.169580_g28496_i0reverse_frame_2 - 0.011 15.1 0.0 0.019 14.3 0.0 1.4 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Phage_spike PF18715.1 NODE_35543_length_607_cov_2.169580_g28496_i0reverse_frame_2 - 0.041 14.0 0.1 0.074 13.1 0.1 1.3 1 0 0 1 1 1 0 Phage spike trimer GcrA PF07750.11 NODE_35542_length_607_cov_2.438811_g28495_i0reverse_frame_3 - 0.21 12.0 2.2 0.4 11.1 2.2 1.4 1 0 0 1 1 1 0 GcrA cell cycle regulator Torus PF16131.5 NODE_35542_length_607_cov_2.438811_g28495_i0forward_frame_3 - 0.051 14.3 0.2 0.077 13.7 0.2 1.2 1 0 0 1 1 1 0 Torus domain zf-CCCH PF00642.24 NODE_35542_length_607_cov_2.438811_g28495_i0forward_frame_3 - 0.053 13.5 0.6 0.088 12.7 0.6 1.4 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) B-block_TFIIIC PF04182.12 NODE_35540_length_607_cov_2.629371_g28493_i0reverse_frame_3 - 0.0037 17.4 0.0 0.0073 16.5 0.0 1.5 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC CLASP_N PF12348.8 NODE_35540_length_607_cov_2.629371_g28493_i0reverse_frame_2 - 3.3e-06 26.8 0.0 6e-06 26.0 0.0 1.4 1 1 1 2 2 2 1 CLASP N terminal LIFR_N PF18207.1 NODE_35539_length_607_cov_2.888112_g28492_i0forward_frame_3 - 0.064 13.6 0.2 0.064 13.6 0.2 2.2 2 1 0 2 2 2 0 Leukemia inhibitory factor receptor N-terminal domain dTDP_sugar_isom PF00908.17 NODE_35539_length_607_cov_2.888112_g28492_i0forward_frame_3 - 0.12 12.0 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 dTDP-4-dehydrorhamnose 3,5-epimerase MCU PF04678.13 NODE_35531_length_607_cov_7.930070_g28484_i0reverse_frame_2 - 8.6 6.4 12.2 5.5 7.1 10.3 1.7 1 1 0 1 1 1 0 Mitochondrial calcium uniporter SRP_TPR_like PF17004.5 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.0076 16.3 0.2 0.019 15.0 0.2 1.7 1 0 0 1 1 1 1 Putative TPR-like repeat DHR10 PF18595.1 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.18 11.9 10.8 0.52 10.4 3.2 3.2 2 1 1 3 3 3 0 Designed helical repeat protein 10 domain DUF4407 PF14362.6 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.19 11.0 6.9 0.24 10.7 6.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3450 PF11932.8 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.42 9.9 11.7 0.21 10.9 5.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.45 10.0 6.9 0.58 9.7 6.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DASH_Dam1 PF08653.10 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 2.6 7.9 9.9 7 6.5 1.2 3.8 4 0 0 4 4 4 0 DASH complex subunit Dam1 Cep57_MT_bd PF06657.13 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 3.6 8.1 10.8 7.7 7.0 3.0 3.1 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 LMBR1 PF04791.16 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 5.2 5.9 6.7 5.7 5.7 6.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein FlaC_arch PF05377.11 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 6.7 7.2 16.8 12 6.4 3.3 3.9 1 1 2 4 4 4 0 Flagella accessory protein C (FlaC) DUF948 PF06103.11 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 7.5 6.9 9.2 6.3 7.1 5.2 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) TMPIT PF07851.13 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 9.8 5.3 13.2 4.1 6.5 9.2 1.9 1 1 0 2 2 2 0 TMPIT-like protein HTH_45 PF14947.6 NODE_35513_length_607_cov_138.414336_g28467_i0reverse_frame_3 - 0.11 12.5 1.6 0.19 11.7 0.3 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix Urate_ox_N PF06181.11 NODE_35513_length_607_cov_138.414336_g28467_i0reverse_frame_2 - 0.05 12.9 0.3 0.07 12.5 0.3 1.1 1 0 0 1 1 1 0 Urate oxidase N-terminal DUF4495 PF14906.6 NODE_35513_length_607_cov_138.414336_g28467_i0forward_frame_2 - 0.0026 16.9 0.8 0.0034 16.5 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4495) Phospholip_A2_2 PF05826.12 NODE_35513_length_607_cov_138.414336_g28467_i0forward_frame_2 - 0.021 15.0 1.0 0.037 14.2 1.0 1.4 1 0 0 1 1 1 0 Phospholipase A2 CP12 PF02672.15 NODE_35497_length_607_cov_611.833916_g28451_i0reverse_frame_2 - 0.017 15.9 2.1 0.11 13.3 1.8 2.2 2 0 0 2 2 2 0 CP12 domain DUF948 PF06103.11 NODE_35497_length_607_cov_611.833916_g28451_i0reverse_frame_2 - 0.091 13.0 2.4 0.83 9.9 0.1 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) APG6_N PF17675.1 NODE_35497_length_607_cov_611.833916_g28451_i0reverse_frame_2 - 0.31 11.6 10.9 0.75 10.3 10.9 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region DivIC PF04977.15 NODE_35497_length_607_cov_611.833916_g28451_i0reverse_frame_2 - 0.46 10.3 8.6 0.43 10.4 3.0 2.5 2 0 0 2 2 2 0 Septum formation initiator CENP-H PF05837.12 NODE_35497_length_607_cov_611.833916_g28451_i0reverse_frame_2 - 1.7 9.1 12.6 0.19 12.1 5.6 2.3 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DUF848 PF05852.11 NODE_35497_length_607_cov_611.833916_g28451_i0reverse_frame_2 - 2.8 8.1 8.4 1.1 9.4 3.2 2.4 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) SecA_DEAD PF07517.14 NODE_35476_length_608_cov_4.186736_g28438_i0reverse_frame_2 - 5.9e-84 281.8 0.0 6.6e-84 281.6 0.0 1.0 1 0 0 1 1 1 1 SecA DEAD-like domain DEAD PF00270.29 NODE_35476_length_608_cov_4.186736_g28438_i0reverse_frame_2 - 0.0016 18.2 0.0 0.0027 17.5 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 NODE_35476_length_608_cov_4.186736_g28438_i0reverse_frame_2 - 0.16 11.9 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Pkinase PF00069.25 NODE_35474_length_608_cov_4.567190_g28436_i0reverse_frame_3 - 0.064 12.6 0.1 0.1 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain C2 PF00168.30 NODE_35470_length_608_cov_67.574171_g28432_i0reverse_frame_2 - 6.9e-18 64.8 0.0 1.5e-17 63.8 0.0 1.5 1 1 0 1 1 1 1 C2 domain WD40 PF00400.32 NODE_35467_length_608_cov_78.099476_g28429_i0reverse_frame_2 - 7.8e-09 36.0 0.1 2e-08 34.7 0.1 1.7 1 0 0 1 1 1 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_35467_length_608_cov_78.099476_g28429_i0reverse_frame_2 - 0.00035 20.8 0.0 0.00058 20.1 0.0 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 NODE_35467_length_608_cov_78.099476_g28429_i0reverse_frame_2 - 0.046 12.7 0.0 0.068 12.1 0.0 1.3 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein DUF2715 PF10895.8 NODE_35460_length_608_cov_106.902269_g28422_i0reverse_frame_3 - 0.075 12.7 0.0 0.085 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) DUF3949 PF13133.6 NODE_35458_length_608_cov_116.425829_g18424_i3reverse_frame_3 - 0.11 13.0 0.0 12 6.4 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3949) TaqI_C PF12950.7 NODE_35456_length_608_cov_129.759162_g28420_i0forward_frame_3 - 0.012 15.7 1.1 0.018 15.1 1.0 1.5 1 1 0 1 1 1 0 TaqI-like C-terminal specificity domain C_Hendra PF16821.5 NODE_35456_length_608_cov_129.759162_g28420_i0forward_frame_3 - 0.35 10.7 4.4 9.3 6.1 0.1 2.1 2 0 0 2 2 2 0 C protein from hendra and measles viruses TUG-UBL1 PF11470.8 NODE_35452_length_608_cov_146.949389_g28416_i0forward_frame_2 - 0.031 14.5 0.0 0.054 13.7 0.0 1.4 1 0 0 1 1 1 0 TUG ubiquitin-like domain DUF4665 PF15679.5 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.015 15.9 3.4 0.015 15.9 3.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4665) SLX9 PF15341.6 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.016 15.6 3.3 0.03 14.7 3.3 1.4 1 1 0 1 1 1 0 Ribosome biogenesis protein SLX9 CASP_C PF08172.12 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.077 12.3 9.5 0.57 9.5 1.0 2.2 1 1 1 2 2 2 0 CASP C terminal Jnk-SapK_ap_N PF09744.9 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.25 11.5 14.5 0.16 12.2 5.1 2.2 1 1 0 2 2 2 0 JNK_SAPK-associated protein-1 DUF4472 PF14739.6 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.43 11.3 13.1 1.8 9.3 6.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) DUF1664 PF07889.12 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 1 9.4 8.2 2.8 8.0 2.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) YabA PF06156.13 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 1.2 9.8 13.0 5.1 7.8 1.6 2.8 1 1 1 2 2 2 0 Initiation control protein YabA HAUS-augmin3 PF14932.6 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 1.6 8.3 11.4 0.42 10.2 2.9 2.1 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Spc7 PF08317.11 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 3.3 6.5 15.2 9.6 5.0 15.2 1.7 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF3552 PF12072.8 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 4.4 6.7 16.1 0.081 12.3 7.9 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF3552) DUF4140 PF13600.6 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 4.5 7.8 10.9 26 5.3 3.5 3.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) APG6_N PF17675.1 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 5.1 7.6 16.3 67 4.0 6.3 2.3 1 1 1 2 2 2 0 Apg6 coiled-coil region PDDEXK_6 PF04720.12 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 8 6.3 8.1 1 9.3 1.3 2.0 2 0 0 2 2 2 0 PDDEXK-like family of unknown function tRNA_anti-codon PF01336.25 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 0.00049 20.0 0.0 0.00096 19.1 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Gar1 PF04410.14 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 0.48 10.2 10.1 0.86 9.4 10.1 1.4 1 0 0 1 1 1 0 Gar1/Naf1 RNA binding region SLC12 PF03522.15 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 2.8 6.9 9.5 3.4 6.6 9.5 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Presenilin PF01080.17 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 3.9 6.1 7.7 4.1 6.1 7.7 1.1 1 0 0 1 1 1 0 Presenilin EIIBC-GUT_N PF03612.14 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 5.4 6.7 6.9 9.3 6.0 6.9 1.3 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Med26 PF08711.11 NODE_35389_length_609_cov_397.813589_g21131_i2forward_frame_3 - 0.0092 16.0 0.0 0.0092 16.0 0.0 2.4 2 1 0 2 2 2 1 TFIIS helical bundle-like domain PspA_IM30 PF04012.12 NODE_35389_length_609_cov_397.813589_g21131_i2forward_frame_3 - 0.11 12.0 7.7 0.15 11.6 7.7 1.2 1 0 0 1 1 1 0 PspA/IM30 family HemY_N PF07219.13 NODE_35389_length_609_cov_397.813589_g21131_i2forward_frame_3 - 4.6 7.5 6.3 6.1 7.1 5.6 1.5 1 1 0 1 1 1 0 HemY protein N-terminus Pkinase PF00069.25 ORF99106 - 1.2e-24 87.1 1.3 1.4e-24 86.8 1.3 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF99106 - 2.4e-15 56.5 0.4 2.9e-15 56.2 0.4 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF99106 - 1e-07 31.5 0.4 1.6e-07 30.9 0.1 1.5 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF99106 - 4.5e-07 30.0 0.0 0.0007 19.6 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF99106 - 0.00011 21.9 0.2 0.00016 21.3 0.2 1.4 1 0 0 1 1 1 1 RIO1 family DUF1679 PF07914.11 ORF99106 - 0.0069 15.3 0.2 0.019 13.8 0.2 1.7 1 1 1 2 2 2 2 Protein of unknown function (DUF1679) Homeodomain PF00046.29 ORF96782 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF96782 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 Mito_carr PF00153.27 ORF9581 - 7.7e-38 128.3 2.4 1.5e-19 69.7 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein FAM176 PF14851.6 ORF9581 - 0.064 12.9 0.0 0.094 12.4 0.0 1.3 1 0 0 1 1 1 0 FAM176 family Homeodomain PF00046.29 ORF94278 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF94278 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 SGP PF17228.2 ORF93049 - 0.022 15.6 37.7 0.043 14.7 8.4 4.0 1 1 2 3 3 3 0 Sulphur globule protein Pal1 PF08316.11 ORF92504 - 8.5 7.1 9.8 16 6.2 9.7 1.5 1 1 0 1 1 1 0 Pal1 cell morphology protein Phlebovirus_G1 PF07243.11 ORF91416 - 0.43 8.9 2.7 0.62 8.4 2.7 1.2 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Utp14 PF04615.13 ORF91416 - 1.7 7.2 6.3 1.8 7.0 6.3 1.0 1 0 0 1 1 1 0 Utp14 protein TFIIA PF03153.13 ORF91416 - 9.5 6.1 8.2 9.8 6.1 8.2 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit EF-hand_1 PF00036.32 ORF91176 - 2.9e-21 73.4 8.1 4.2e-07 29.0 0.1 4.6 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF91176 - 1.1e-18 67.4 11.4 2e-09 37.8 0.3 2.9 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF91176 - 7.4e-18 62.9 9.2 0.0001 22.0 0.1 4.6 5 0 0 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 ORF91176 - 1.3e-14 52.9 3.5 0.0002 20.7 0.0 4.7 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF91176 - 6.3e-09 35.6 8.3 1e-06 28.5 0.3 4.1 3 1 1 4 4 4 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF91176 - 0.00082 19.7 0.0 0.58 10.5 0.0 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF91176 - 0.0046 16.9 1.8 1.9 8.5 0.0 3.1 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF91176 - 0.019 15.3 1.5 4.4 7.7 0.0 3.6 2 1 1 3 3 3 0 EF-hand domain Caleosin PF05042.13 ORF91176 - 0.061 13.3 0.5 1.1 9.1 0.0 2.9 3 1 1 4 4 4 0 Caleosin related protein B_solenoid_dext PF18841.1 ORF91176 - 0.38 11.1 3.8 11 6.4 0.1 2.6 2 0 0 2 2 2 0 Beta solenoid repeat from Dextranase Dockerin_1 PF00404.18 ORF91176 - 2.6 8.3 8.0 0.34 11.1 0.4 3.2 3 1 1 4 4 4 0 Dockerin type I domain DUF554 PF04474.12 ORF9008 - 5.9e-57 192.7 18.5 6.6e-57 192.5 18.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF554) GMP_PDE_delta PF05351.11 ORF88805 - 2.7e-56 190.0 0.1 4.3e-56 189.3 0.0 1.3 2 0 0 2 2 2 1 GMP-PDE, delta subunit Peptidase_S74 PF13884.6 ORF88051 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Peptidase_S74 PF13884.6 ORF84038 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Vpu PF00558.19 ORF83778 - 0.06 13.1 1.2 0.12 12.2 1.2 1.4 1 0 0 1 1 1 0 Vpu protein Homeodomain PF00046.29 ORF82854 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF82854 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 zf-C2H2_10 PF16588.5 ORF82479 - 0.00083 19.0 9.8 0.18 11.6 2.4 2.4 2 0 0 2 2 2 2 C2H2 zinc-finger zf-CCHC_4 PF14392.6 ORF82479 - 0.0011 18.7 5.3 0.18 11.5 0.6 2.4 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC PF00098.23 ORF82479 - 0.0019 18.2 3.2 0.0019 18.2 3.2 2.5 3 0 0 3 3 3 1 Zinc knuckle DnaJ_CXXCXGXG PF00684.19 ORF82479 - 0.013 15.9 6.2 0.023 15.0 6.2 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF5351 PF17302.2 ORF82479 - 0.061 13.5 6.4 0.22 11.7 1.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5351) TMEM239 PF15841.5 ORF82479 - 7.8 6.4 8.0 10 6.0 8.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 239 family Peptidase_S74 PF13884.6 ORF81960 - 2.4e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase SBP_bac_3 PF00497.20 ORF80878 - 1.5e-48 165.2 0.7 1.7e-48 165.0 0.7 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.11 ORF80878 - 5.2e-05 23.3 0.0 0.0012 18.8 0.0 2.1 1 1 0 2 2 2 1 NMT1/THI5 like Lig_chan-Glu_bd PF10613.9 ORF80878 - 0.01 16.0 0.0 0.018 15.2 0.0 1.4 1 0 0 1 1 1 0 Ligated ion channel L-glutamate- and glycine-binding site Thioredoxin PF00085.20 ORF79929 - 5.5e-06 26.3 0.0 8.9e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin ROK PF00480.20 ORF79706 - 6.4e-14 52.1 0.0 7.5e-14 51.9 0.0 1.1 1 0 0 1 1 1 1 ROK family baeRF_family10 PF18854.1 ORF79706 - 0.0059 16.9 0.0 0.0082 16.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 baeRF_family2 PF18844.1 ORF79706 - 0.012 15.7 0.2 0.017 15.2 0.2 1.3 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 Rhodanese PF00581.20 ORF75613 - 0.00044 20.7 0.0 0.00068 20.1 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain zf-C2HC_2 PF13913.6 ORF74501 - 3.9e-12 45.8 2.0 9.4e-12 44.5 2.0 1.7 1 0 0 1 1 1 1 zinc-finger of a C2HC-type DUF2318 PF10080.9 ORF74501 - 0.039 14.1 0.3 0.086 13.0 0.3 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) c-SKI_SMAD_bind PF08782.10 ORF74501 - 0.063 13.5 0.8 0.12 12.6 0.3 1.8 1 1 1 2 2 2 0 c-SKI Smad4 binding domain PDZ PF00595.24 ORF73875 - 0.00028 21.2 0.1 0.00067 20.0 0.1 1.7 1 1 0 1 1 1 1 PDZ domain Tricorn_PDZ PF14685.6 ORF73875 - 0.0012 18.8 0.0 0.002 18.0 0.0 1.3 1 0 0 1 1 1 1 Tricorn protease PDZ domain PDZ_6 PF17820.1 ORF73875 - 0.016 15.0 0.1 0.072 13.0 0.0 2.2 2 0 0 2 2 2 0 PDZ domain Ank_4 PF13637.6 ORF73854 - 3.2e-17 62.7 6.7 6.9e-07 29.7 0.1 4.9 1 1 5 6 6 6 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF73854 - 3.4e-16 59.6 0.9 2.6e-11 44.0 1.7 3.2 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF73854 - 5e-16 58.6 5.8 2.3e-05 24.6 0.1 4.9 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF73854 - 9.7e-14 50.2 1.7 0.039 14.5 0.0 5.4 6 0 0 6 6 6 3 Ankyrin repeat Ank PF00023.30 ORF73854 - 4.2e-13 49.1 4.7 0.0019 18.5 0.1 5.4 5 1 0 5 5 5 3 Ankyrin repeat Glycos_transf_1 PF00534.20 ORF73805 - 2.7e-12 46.6 0.0 3.7e-12 46.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF73805 - 9.3e-09 35.8 0.0 1.4e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 BTB_3 PF16017.5 ORF71209 - 0.16 12.1 0.0 0.32 11.1 0.0 1.5 1 0 0 1 1 1 0 BTB/POZ domain DUF4407 PF14362.6 ORF71209 - 0.44 9.9 15.8 0.17 11.2 13.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Snapin_Pallidin PF14712.6 ORF71209 - 0.53 10.7 5.2 2.1 8.8 0.4 2.7 2 0 0 2 2 2 0 Snapin/Pallidin CDC37_N PF03234.14 ORF71209 - 1.1 10.2 10.0 3.6 8.5 2.3 2.3 1 1 0 2 2 2 0 Cdc37 N terminal kinase binding TPK_catalytic PF04263.16 ORF70715 - 1.6e-29 102.4 0.0 2.1e-29 102.0 0.0 1.2 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, catalytic domain TPK_B1_binding PF04265.14 ORF70715 - 8.1e-06 25.5 0.0 2.2e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, vitamin B1 binding domain DUF1490 PF07371.12 ORF68747 - 0.00083 19.4 5.1 0.018 15.1 0.2 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1490) Prefoldin_2 PF01920.20 ORF68747 - 0.041 13.8 2.0 0.7 9.9 0.0 2.9 3 1 0 3 3 3 0 Prefoldin subunit VRR_NUC PF08774.11 ORF68747 - 0.042 13.9 0.0 0.066 13.3 0.0 1.4 1 0 0 1 1 1 0 VRR-NUC domain UPF0242 PF06785.11 ORF68747 - 0.05 13.7 2.6 0.085 13.0 2.6 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4164 PF13747.6 ORF68747 - 0.16 12.2 5.3 0.069 13.4 2.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) DUF4635 PF15466.6 ORF68747 - 0.54 9.8 4.9 1.3 8.5 0.5 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4635) GFD1 PF17331.2 ORF68747 - 1.7 9.0 5.4 3.8 7.8 3.9 2.4 2 1 0 2 2 2 0 GFD1 mRNA transport factor Peptidase_S74 PF13884.6 ORF68300 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Pyr_redox_2 PF07992.14 ORF67486 - 0.0051 16.1 0.0 0.12 11.6 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Homeodomain PF00046.29 ORF67006 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF67006 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 ubiquitin PF00240.23 ORF63559 - 2.7e-07 30.2 0.0 4.3e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family Cwf_Cwc_15 PF04889.12 ORF6297 - 0.05 13.3 10.2 0.074 12.8 10.2 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Fmp27_SW PF10305.9 ORF6297 - 0.11 13.2 2.8 1.4 9.7 0.3 2.2 2 0 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain DTHCT PF08070.11 ORF6297 - 0.14 12.9 12.1 0.049 14.4 5.6 2.2 2 0 0 2 2 2 0 DTHCT (NUC029) region BRF1 PF07741.13 ORF6297 - 0.27 11.6 15.0 0.2 12.0 6.1 2.2 2 0 0 2 2 2 0 Brf1-like TBP-binding domain GRAM PF02893.20 ORF62041 - 0.025 14.5 0.0 0.063 13.2 0.0 1.6 2 1 0 2 2 2 0 GRAM domain Homeodomain PF00046.29 ORF61693 - 5.2e-05 23.0 0.3 0.00014 21.7 0.3 1.7 1 0 0 1 1 1 1 Homeodomain MORN PF02493.20 ORF61399 - 4.9e-06 26.1 16.5 0.00013 21.6 3.1 4.0 4 1 0 4 4 4 2 MORN repeat DUF1298 PF06974.13 ORF61170 - 2.4e-09 37.3 0.1 3.5e-09 36.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Microvir_lysis PF04517.12 ORF60420 - 0.057 13.3 0.1 1.6 8.7 0.0 2.4 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus Homeodomain PF00046.29 ORF59581 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF59581 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 RTC PF01137.21 ORF57781 - 0.13 11.4 0.0 0.16 11.1 0.0 1.0 1 0 0 1 1 1 0 RNA 3'-terminal phosphate cyclase Pkinase PF00069.25 ORF56697 - 1.1e-56 192.2 0.0 1.2e-56 192.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF56697 - 3.8e-31 108.3 0.0 4.3e-31 108.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF56697 - 6.3e-06 25.7 0.0 8.5e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF56697 - 0.00016 20.6 0.0 0.00022 20.1 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF56697 - 0.00062 19.2 0.0 0.002 17.5 0.0 1.7 1 1 0 1 1 1 1 Kinase-like E1_4HB PF16191.5 ORF54801 - 1.6e-05 25.0 0.0 0.077 13.2 0.0 2.5 2 0 0 2 2 2 2 Ubiquitin-activating enzyme E1 four-helix bundle Gal-bind_lectin PF00337.22 ORF54801 - 0.023 14.2 0.0 0.83 9.2 0.0 2.1 2 0 0 2 2 2 0 Galactoside-binding lectin DUF3837 PF12939.7 ORF54801 - 0.026 14.9 3.1 0.11 12.9 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) MAS20 PF02064.15 ORF54801 - 0.055 13.6 3.9 0.84 9.7 0.1 2.1 2 0 0 2 2 2 0 MAS20 protein import receptor LRR_9 PF14580.6 ORF53896 - 7.2e-10 38.6 0.1 1e-09 38.1 0.1 1.2 1 0 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 ORF53896 - 5.3e-06 26.7 3.6 0.13 12.7 0.0 3.1 2 1 1 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF53896 - 0.051 13.3 0.5 1.8 8.4 0.1 2.5 2 1 0 2 2 2 0 Leucine rich repeat KRTDAP PF15200.6 ORF53896 - 0.11 12.3 0.0 0.22 11.3 0.0 1.6 1 0 0 1 1 1 0 Keratinocyte differentiation-associated Rz1 PF06085.11 ORF50405 - 0.057 13.2 0.0 0.13 12.0 0.0 1.6 2 0 0 2 2 2 0 Lipoprotein Rz1 precursor Homeodomain PF00046.29 ORF50370 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF50370 - 0.4 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 EamA PF00892.20 ORF4981 - 5.9e-12 45.9 8.5 1.1e-11 45.0 8.5 1.4 1 1 0 1 1 1 1 EamA-like transporter family TPT PF03151.16 ORF4981 - 0.0049 16.3 0.0 0.0059 16.0 0.0 1.2 1 0 0 1 1 1 1 Triose-phosphate Transporter family HOK_GEF PF01848.16 ORF4981 - 0.099 12.1 1.4 0.23 10.9 1.4 1.6 1 0 0 1 1 1 0 Hok/gef family Nas2_N PF18265.1 ORF48531 - 9.7e-21 73.5 0.1 2.5e-20 72.2 0.1 1.6 1 0 0 1 1 1 1 Nas2 N_terminal domain PDZ_2 PF13180.6 ORF48531 - 3.9e-09 36.7 0.1 1.1e-08 35.2 0.0 1.8 2 0 0 2 2 2 1 PDZ domain PDZ_6 PF17820.1 ORF48531 - 4.4e-07 29.6 1.2 7.6e-07 28.9 0.1 2.1 3 0 0 3 3 3 1 PDZ domain PDZ PF00595.24 ORF48531 - 8.9e-06 26.0 0.2 2.4e-05 24.6 0.0 1.8 2 0 0 2 2 2 1 PDZ domain GRASP55_65 PF04495.14 ORF48531 - 0.0042 17.4 0.1 0.0089 16.3 0.0 1.5 2 0 0 2 2 2 1 GRASP55/65 PDZ-like domain CdvA PF18822.1 ORF48531 - 0.063 13.1 0.5 0.18 11.6 0.5 1.8 1 1 0 1 1 1 0 CdvA-like coiled-coil domain PCP PF02429.15 ORF47789 - 1.7e-60 203.6 8.3 2.1e-60 203.3 8.3 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF47789 - 0.047 14.1 2.6 0.07 13.5 1.3 2.0 1 1 2 3 3 3 0 Protein of unknown function (DUF732) Homeodomain PF00046.29 ORF47654 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF47654 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 SRP_SPB PF02978.19 ORF46219 - 2.9e-08 34.2 0.1 2.9e-08 34.2 0.1 1.9 3 0 0 3 3 3 1 Signal peptide binding domain HEPN_STY4199 PF18729.1 ORF46219 - 0.019 14.2 0.1 0.044 13.0 0.0 1.6 1 1 0 1 1 1 0 STY4199-like HEPN Com_YlbF PF06133.11 ORF46219 - 3.4 8.3 6.9 1.2 9.8 0.7 2.3 2 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA zf-C2HC_2 PF13913.6 ORF45778 - 3.9e-12 45.8 2.0 9.4e-12 44.5 2.0 1.7 1 0 0 1 1 1 1 zinc-finger of a C2HC-type DUF2318 PF10080.9 ORF45778 - 0.039 14.1 0.3 0.086 13.0 0.3 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) c-SKI_SMAD_bind PF08782.10 ORF45778 - 0.063 13.5 0.8 0.12 12.6 0.3 1.8 1 1 1 2 2 2 0 c-SKI Smad4 binding domain EF-hand_6 PF13405.6 ORF45396 - 0.00096 18.9 0.4 0.15 12.1 0.2 2.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF45396 - 0.015 14.8 1.9 0.33 10.6 0.2 3.1 3 0 0 3 3 3 0 EF hand Phage_int_SAM_4 PF13495.6 ORF45396 - 0.041 14.4 0.0 0.07 13.6 0.0 1.4 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain UPF0154 PF03672.13 ORF45396 - 0.13 12.3 0.0 0.28 11.3 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) EF-hand_7 PF13499.6 ORF45396 - 0.31 11.5 3.9 0.91 10.0 2.5 2.4 2 1 0 2 2 2 0 EF-hand domain pair Ras PF00071.22 ORF44626 - 1.7e-65 219.6 1.0 1.9e-65 219.4 1.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF44626 - 8.2e-36 122.9 0.5 1.4e-35 122.1 0.1 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF44626 - 2.5e-16 59.6 0.1 3.2e-16 59.3 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF44626 - 2.7e-06 27.4 0.6 0.042 13.7 0.1 2.3 1 1 1 2 2 2 2 RsgA GTPase SRPRB PF09439.10 ORF44626 - 5.1e-06 26.0 0.1 8.2e-06 25.4 0.1 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF44626 - 1.5e-05 24.4 0.2 1.8e-05 24.2 0.2 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF44626 - 5.3e-05 23.3 0.0 0.00038 20.5 0.0 1.9 1 1 1 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF44626 - 0.0054 16.3 0.3 0.012 15.2 0.1 1.6 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AAA_16 PF13191.6 ORF44626 - 0.012 16.1 0.0 0.028 14.8 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 ORF44626 - 0.021 15.2 0.1 0.62 10.5 0.0 2.2 1 1 1 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF44626 - 0.021 15.1 0.0 0.049 13.9 0.0 1.6 1 1 1 2 2 2 0 AAA domain TniB PF05621.11 ORF44626 - 0.024 14.0 0.0 0.052 13.0 0.0 1.7 2 0 0 2 2 2 0 Bacterial TniB protein AAA_7 PF12775.7 ORF44626 - 0.03 13.8 0.0 0.094 12.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_29 PF13555.6 ORF44626 - 0.066 13.0 0.0 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 ORF44626 - 0.07 13.1 0.0 0.1 12.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) PduV-EutP PF10662.9 ORF44626 - 0.082 12.7 0.2 11 5.8 0.0 2.4 1 1 1 2 2 2 0 Ethanolamine utilisation - propanediol utilisation PhyH PF05721.13 ORF44626 - 0.14 12.4 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) ABC_tran PF00005.27 ORF44626 - 0.17 12.4 0.0 0.26 11.8 0.0 1.6 1 1 0 1 1 1 0 ABC transporter Peptidase_S74 PF13884.6 ORF44247 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase GST_N_3 PF13417.6 ORF44055 - 3.9e-13 49.6 0.0 6.4e-13 48.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF44055 - 4.3e-11 42.9 0.0 5.8e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF44055 - 1.2e-09 38.3 0.0 2.2e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF44055 - 5.9e-08 33.0 0.0 1.6e-07 31.6 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain Peptidase_M24_C PF16188.5 ORF4349 - 0.15 12.2 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 Dynein_light PF01221.18 ORF4311 - 3e-06 27.4 0.0 4.5e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Dynein light chain type 1 DUF2981 PF11200.8 ORF41348 - 4.2 7.0 5.8 4.8 6.8 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) MDFI PF15316.6 ORF41348 - 5.5 7.0 10.0 4.4 7.3 8.4 1.7 1 1 0 1 1 1 0 MyoD family inhibitor C1q PF00386.21 ORF38118 - 0.064 13.5 0.1 0.12 12.5 0.0 1.5 2 0 0 2 2 2 0 C1q domain Pollen_allerg_1 PF01357.21 ORF38118 - 0.071 13.1 1.6 2 8.5 0.1 2.4 1 1 1 2 2 2 0 Pollen allergen OB_NTP_bind PF07717.16 ORF37213 - 2e-05 24.8 0.1 4.4e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 ORF37213 - 0.018 15.4 0.0 0.043 14.2 0.0 1.5 2 0 0 2 2 2 0 Helicase conserved C-terminal domain APC_u14 PF16635.5 ORF37061 - 0.013 16.1 0.1 0.021 15.3 0.1 1.3 1 0 0 1 1 1 0 Unstructured region on APC between SAMP and APC_crr SRPRB PF09439.10 ORF37061 - 0.055 12.9 0.1 0.071 12.5 0.1 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Vpu PF00558.19 ORF36407 - 0.061 13.1 1.2 0.12 12.2 1.2 1.4 1 0 0 1 1 1 0 Vpu protein Pex14_N PF04695.13 ORF35724 - 7.4 7.2 11.3 1.7 9.3 7.9 1.7 1 1 1 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Rab5-bind PF09311.11 ORF35522 - 0.015 14.7 4.2 0.023 14.1 4.2 1.3 1 0 0 1 1 1 0 Rabaptin-like protein DUF3450 PF11932.8 ORF35522 - 0.03 13.6 7.1 0.054 12.8 2.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) FmiP_Thoc5 PF09766.9 ORF35522 - 0.042 13.1 2.2 0.053 12.8 2.2 1.3 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 OmpH PF03938.14 ORF35522 - 0.06 13.7 4.8 0.61 10.4 4.9 2.1 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Thioredoxin_13 PF18401.1 ORF35522 - 0.083 12.8 1.5 0.19 11.7 1.5 1.6 1 1 0 1 1 1 0 Thioredoxin-like domain DUF4472 PF14739.6 ORF35522 - 0.086 13.6 5.6 0.29 11.9 1.5 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4472) DUF16 PF01519.16 ORF35522 - 0.14 12.7 1.0 0.24 11.9 0.1 1.8 2 1 0 2 2 2 0 Protein of unknown function DUF16 DLP_helical PF18709.1 ORF35522 - 0.15 11.2 2.8 0.067 12.4 0.6 1.5 2 0 0 2 2 2 0 Dynamin-like helical domain Flg_hook PF02120.16 ORF35522 - 0.74 9.7 9.1 0.33 10.9 2.0 3.3 2 2 1 3 3 3 0 Flagellar hook-length control protein FliK Golgin_A5 PF09787.9 ORF35522 - 2.5 7.5 10.3 3.2 7.1 8.5 1.8 1 1 0 1 1 1 0 Golgin subfamily A member 5 T2SSF PF00482.23 ORF35522 - 3.4 7.6 6.3 1.8 8.5 3.4 2.1 2 2 0 2 2 2 0 Type II secretion system (T2SS), protein F Exonuc_VII_L PF02601.15 ORF35522 - 3.5 7.1 7.6 7.8 6.0 7.6 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF2524 PF10732.9 ORF35522 - 4.7 7.6 9.1 0.36 11.2 2.6 2.5 3 1 1 4 4 4 0 Protein of unknown function (DUF2524) Phage_integrase PF00589.22 ORF34836 - 0.0065 16.3 0.0 0.07 12.9 0.0 2.1 1 1 0 1 1 1 1 Phage integrase family G2F PF07474.12 ORF31967 - 0.025 14.3 1.6 0.04 13.7 1.1 1.6 1 1 1 2 2 2 0 G2F domain Ham1p_like PF01725.16 ORF31730 - 0.012 15.6 0.7 0.019 14.9 0.7 1.4 1 0 0 1 1 1 0 Ham1 family YqzH PF14164.6 ORF31730 - 0.018 15.1 1.7 0.049 13.7 0.8 2.2 1 1 1 2 2 2 0 YqzH-like protein FAD_binding_9 PF08021.11 ORF31730 - 0.035 14.3 0.1 0.06 13.6 0.1 1.4 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain DUF1490 PF07371.12 ORF31637 - 0.00083 19.4 5.1 0.018 15.1 0.2 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1490) Prefoldin_2 PF01920.20 ORF31637 - 0.041 13.8 2.0 0.7 9.9 0.0 2.9 3 1 0 3 3 3 0 Prefoldin subunit VRR_NUC PF08774.11 ORF31637 - 0.042 13.9 0.0 0.066 13.3 0.0 1.4 1 0 0 1 1 1 0 VRR-NUC domain UPF0242 PF06785.11 ORF31637 - 0.05 13.7 2.6 0.085 13.0 2.6 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4164 PF13747.6 ORF31637 - 0.16 12.2 5.3 0.069 13.4 2.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) DUF4635 PF15466.6 ORF31637 - 0.54 9.8 4.9 1.3 8.5 0.5 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4635) GFD1 PF17331.2 ORF31637 - 1.7 9.0 5.4 3.8 7.8 3.9 2.4 2 1 0 2 2 2 0 GFD1 mRNA transport factor Peptidase_S74 PF13884.6 ORF31361 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Homeodomain PF00046.29 ORF26063 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF26063 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 Chor_lyase PF04345.13 ORF24195 - 1.7e-30 105.9 0.0 2.1e-30 105.6 0.0 1.1 1 0 0 1 1 1 1 Chorismate lyase UTRA PF07702.13 ORF24195 - 0.047 13.6 0.0 0.13 12.1 0.0 1.8 1 1 1 2 2 2 0 UTRA domain DUF22 PF01629.16 ORF22844 - 0.016 14.9 0.3 2.7 7.7 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function DUF22 DUF5595 PF18077.1 ORF21191 - 0.51 10.5 2.7 0.89 9.7 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5595) Aldo_ket_red PF00248.21 ORF18237 - 9.3e-12 44.7 0.0 1.1e-11 44.5 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Homeodomain PF00046.29 ORF16853 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF16853 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 DUF2951 PF11166.8 ORF14462 - 0.018 15.2 0.4 0.25 11.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) EMC3_TMCO1 PF01956.16 ORF14462 - 0.027 14.2 1.8 0.032 14.0 0.6 1.7 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like SurA_N_3 PF13624.6 ORF14462 - 0.049 13.4 0.1 0.089 12.6 0.1 1.4 1 0 0 1 1 1 0 SurA N-terminal domain ELO PF01151.18 ORF14462 - 0.06 12.9 0.0 0.06 12.9 0.0 2.0 2 0 0 2 2 2 0 GNS1/SUR4 family DUF948 PF06103.11 ORF14462 - 0.088 13.1 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF4199 PF13858.6 ORF14462 - 0.82 10.0 13.0 0.07 13.5 3.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) DUF2207 PF09972.9 ORF14462 - 2.5 6.8 9.0 21 3.7 5.9 2.4 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) Orf78 PF06024.12 ORF14462 - 2.9 8.3 9.7 2.1 8.7 3.5 2.5 1 1 1 2 2 2 0 Orf78 (ac78) LexA_DNA_bind PF01726.16 ORF12763 - 8.7e-32 108.7 0.1 1.4e-31 108.1 0.1 1.3 1 0 0 1 1 1 1 LexA DNA binding domain Peptidase_S24 PF00717.23 ORF12763 - 3.3e-16 59.0 0.8 4.8e-16 58.5 0.8 1.3 1 0 0 1 1 1 1 Peptidase S24-like Rrf2 PF02082.20 ORF12763 - 0.00044 20.5 0.0 0.00094 19.5 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_20 PF12840.7 ORF12763 - 0.00056 19.9 0.0 0.0012 18.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 ORF12763 - 0.00094 19.1 0.1 0.0021 18.0 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 ORF12763 - 0.019 14.5 0.1 0.09 12.3 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_11 PF08279.12 ORF12763 - 0.026 14.5 0.1 0.26 11.2 0.0 2.3 2 0 0 2 2 2 0 HTH domain HTH_24 PF13412.6 ORF12763 - 0.091 12.3 0.3 0.3 10.7 0.0 2.1 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding GHMP_kinases_C PF08544.13 ORF12608 - 3.4e-06 27.3 0.0 5.2e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 GHMP kinases C terminal EF-hand_8 PF13833.6 ORF11400 - 1.9e-07 30.8 0.2 8.4e-07 28.7 0.1 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF11400 - 1.2e-06 28.8 2.0 0.0001 22.6 0.1 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF11400 - 0.00021 20.6 0.9 0.0005 19.4 0.2 2.1 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF11400 - 0.0022 17.8 2.4 0.082 12.9 0.1 3.0 3 0 0 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 ORF11400 - 0.079 12.5 0.0 0.18 11.3 0.0 1.6 1 0 0 1 1 1 0 EF hand TRP PF06011.12 ORF111397 - 3.3e-06 26.1 9.4 4e-06 25.8 9.4 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF4834 PF16118.5 ORF111397 - 0.065 14.2 0.6 0.065 14.2 0.6 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) Homeodomain PF00046.29 ORF111174 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF111174 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 Ank_2 PF12796.7 ORF111008 - 4.4e-31 107.3 0.1 6.8e-13 49.0 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF111008 - 1.6e-23 82.7 0.5 4e-07 30.5 0.0 3.9 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF111008 - 1.1e-21 76.6 3.5 1.5e-05 25.2 0.1 5.9 1 1 5 6 6 6 6 Ankyrin repeats (many copies) Ank PF00023.30 ORF111008 - 6.6e-21 73.8 1.0 0.0032 17.9 0.0 6.1 5 1 1 6 6 6 6 Ankyrin repeat Ank_3 PF13606.6 ORF111008 - 8e-19 65.8 0.1 0.091 13.4 0.0 6.1 6 0 0 6 6 6 5 Ankyrin repeat RVP PF00077.20 ORF111008 - 6.1e-05 23.3 0.0 0.013 15.7 0.0 2.5 1 1 0 2 2 2 1 Retroviral aspartyl protease SatRNA_48 PF17485.2 ORF111008 - 0.00037 19.7 0.0 0.44 9.6 0.0 2.0 1 1 1 2 2 2 2 Satellite RNA 48 kDa protein GATase PF00117.28 ORF110931 - 0.095 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Glutamine amidotransferase class-I Sigma_reg_C PF13791.6 ORF110931 - 0.15 12.3 0.4 0.3 11.3 0.3 1.6 1 1 1 2 2 2 0 Sigma factor regulator C-terminal MSA-2c PF12238.8 ORF108371 - 7.8 6.4 5.6 12 5.9 5.6 1.3 1 0 0 1 1 1 0 Merozoite surface antigen 2c Chloroplast_duf PF14476.6 ORF108198 - 0.22 10.5 0.0 0.28 10.1 0.0 1.1 1 0 0 1 1 1 0 Petal formation-expressed Peptidase_M24_C PF16188.5 ORF107298 - 0.15 12.2 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 FAST_1 PF06743.15 ORF106541 - 0.055 13.4 0.0 2.9 7.9 0.0 2.9 2 1 1 3 3 3 0 FAST kinase-like protein, subdomain 1 BTB PF00651.31 ORF104495 - 1.3e-09 38.3 1.3 4.8e-09 36.4 0.5 2.1 2 1 0 2 2 2 1 BTB/POZ domain BACK PF07707.15 ORF104495 - 0.0004 20.4 0.1 0.0032 17.5 0.0 2.2 2 0 0 2 2 2 1 BTB And C-terminal Kelch DDA1 PF10172.9 ORF104032 - 5.9 7.2 9.3 1 9.7 0.9 3.4 3 2 0 3 3 3 0 Det1 complexing ubiquitin ligase Homeodomain PF00046.29 ORF103975 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF103975 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 zf-C2HC_2 PF13913.6 ORF103007 - 3.9e-12 45.8 2.0 9.4e-12 44.5 2.0 1.7 1 0 0 1 1 1 1 zinc-finger of a C2HC-type DUF2318 PF10080.9 ORF103007 - 0.039 14.1 0.3 0.086 13.0 0.3 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) c-SKI_SMAD_bind PF08782.10 ORF103007 - 0.063 13.5 0.8 0.12 12.6 0.3 1.8 1 1 1 2 2 2 0 c-SKI Smad4 binding domain Homeodomain PF00046.29 ORF101952 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF101952 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 Pkinase PF00069.25 ORF101445 - 1e-23 84.1 0.0 1.4e-23 83.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain ADP_ribosyl_GH PF03747.14 ORF100230 - 1.4e-31 110.3 1.3 1.6e-31 110.1 1.3 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase CAS_C PF12026.8 ORF100144 - 0.039 14.0 0.9 2.2 8.3 0.2 2.8 2 1 1 3 3 3 0 Crk-Associated Substrate C-terminal domain CheR PF01739.18 NODE_35833_length_601_cov_3.159011_g28750_i0forward_frame_1 - 3.4e-26 91.9 0.0 4.1e-26 91.7 0.0 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain Methyltransf_12 PF08242.12 NODE_35833_length_601_cov_3.159011_g28750_i0forward_frame_1 - 0.00093 19.9 0.0 0.0014 19.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_35833_length_601_cov_3.159011_g28750_i0forward_frame_1 - 0.0068 17.1 0.0 0.011 16.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_35833_length_601_cov_3.159011_g28750_i0forward_frame_1 - 0.013 16.1 0.0 0.021 15.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_35833_length_601_cov_3.159011_g28750_i0forward_frame_1 - 0.019 14.8 0.0 0.022 14.5 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_35833_length_601_cov_3.159011_g28750_i0forward_frame_1 - 0.08 12.8 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Entericidin PF08085.11 NODE_35832_length_601_cov_3.326855_g28749_i0reverse_frame_1 - 2.8e-06 27.1 1.9 2.8e-06 27.1 1.9 1.6 2 0 0 2 2 2 1 Entericidin EcnA/B family PPR PF01535.20 NODE_35818_length_601_cov_120.537102_g28735_i0forward_frame_1 - 0.17 12.2 0.5 0.44 10.9 0.5 1.7 1 0 0 1 1 1 0 PPR repeat Presenilin PF01080.17 NODE_35805_length_601_cov_274.199647_g28722_i0reverse_frame_1 - 0.15 10.8 15.5 0.16 10.7 15.5 1.2 1 0 0 1 1 1 0 Presenilin PA26 PF04636.13 NODE_35798_length_601_cov_779.871025_g26255_i1reverse_frame_1 - 0.034 13.1 0.0 0.041 12.8 0.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) Tmemb_9 PF05434.11 NODE_35798_length_601_cov_779.871025_g26255_i1reverse_frame_1 - 0.056 13.3 0.1 0.086 12.7 0.1 1.2 1 0 0 1 1 1 0 TMEM9 OAD_gamma PF04277.13 NODE_35798_length_601_cov_779.871025_g26255_i1reverse_frame_1 - 0.13 12.9 0.0 0.25 12.0 0.0 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain MAPEG PF01124.18 NODE_35796_length_601_cov_994.397527_g28674_i1reverse_frame_1 - 2.6e-09 37.1 0.1 3.3e-09 36.7 0.1 1.3 1 0 0 1 1 1 1 MAPEG family Phage_Coat_B PF05356.11 NODE_35796_length_601_cov_994.397527_g28674_i1reverse_frame_1 - 0.15 12.0 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 Phage Coat protein B Ribosomal_L41 PF05162.13 NODE_35795_length_601_cov_2070.060071_g28717_i0reverse_frame_1 - 0.13 12.4 22.6 0.18 11.9 22.6 1.2 1 0 0 1 1 1 0 Ribosomal protein L41 RCC1_2 PF13540.6 NODE_35784_length_602_cov_3.786596_g28707_i0reverse_frame_1 - 4.1e-11 42.4 6.3 0.16 11.8 0.2 4.8 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_35784_length_602_cov_3.786596_g28707_i0reverse_frame_1 - 0.0029 17.7 1.6 8 6.5 0.0 3.6 1 1 2 4 4 4 2 Uncharacterised ACR, YagE family COG1723 Methyltransf_29 PF03141.16 NODE_35784_length_602_cov_3.786596_g28707_i0reverse_frame_1 - 0.0098 14.5 1.8 0.99 7.9 0.1 3.2 2 1 1 3 3 3 1 Putative S-adenosyl-L-methionine-dependent methyltransferase NR_Repeat PF14046.6 NODE_35784_length_602_cov_3.786596_g28707_i0reverse_frame_1 - 0.045 13.9 0.1 1.2 9.3 0.0 3.1 3 0 0 3 3 3 0 Nuclear receptor repeat UPF0180 PF03698.13 NODE_35784_length_602_cov_3.786596_g28707_i0reverse_frame_1 - 0.062 13.5 4.5 38 4.6 0.2 4.5 4 1 1 5 5 5 0 Uncharacterised protein family (UPF0180) AFP_2 PF18815.1 NODE_35784_length_602_cov_3.786596_g28707_i0reverse_frame_1 - 4 7.8 9.7 5.3 7.4 0.1 4.4 3 2 2 5 5 5 0 Bacterial antifreeze protein repeat KbaA PF14089.6 NODE_35784_length_602_cov_3.786596_g28707_i0forward_frame_1 - 0.2 11.5 0.0 0.64 9.8 0.0 1.8 2 0 0 2 2 2 0 KinB-signalling pathway activation in sporulation DUF3326 PF11805.8 NODE_35784_length_602_cov_3.786596_g28707_i0forward_frame_1 - 3.2 6.5 4.2 8.4 5.2 0.6 2.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3326) Sel1 PF08238.12 NODE_35774_length_602_cov_107.458554_g28698_i0reverse_frame_1 - 0.00051 20.6 1.5 0.0024 18.5 0.2 2.5 2 0 0 2 2 2 1 Sel1 repeat Catalase-rel PF06628.12 NODE_35774_length_602_cov_107.458554_g28698_i0reverse_frame_1 - 0.011 16.0 0.0 0.031 14.5 0.0 1.8 1 0 0 1 1 1 0 Catalase-related immune-responsive TPR_2 PF07719.17 NODE_35774_length_602_cov_107.458554_g28698_i0reverse_frame_1 - 0.9 9.8 4.7 3.6 7.9 0.0 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat Atrophin-1 PF03154.15 NODE_35768_length_602_cov_147.837743_g28693_i0reverse_frame_1 - 0.011 14.0 4.2 0.013 13.9 4.2 1.1 1 0 0 1 1 1 0 Atrophin-1 family DUF1635 PF07795.11 NODE_35768_length_602_cov_147.837743_g28693_i0reverse_frame_1 - 0.11 12.3 7.4 0.082 12.8 5.9 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1635) LMBR1 PF04791.16 NODE_35768_length_602_cov_147.837743_g28693_i0reverse_frame_1 - 0.45 9.4 8.8 0.51 9.2 8.8 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Heliorhodopsin PF18761.1 NODE_35749_length_602_cov_923.107584_g28674_i0reverse_frame_1 - 0.063 12.6 0.1 0.095 12.0 0.1 1.2 1 0 0 1 1 1 0 Heliorhodopsin MAPEG PF01124.18 NODE_35749_length_602_cov_923.107584_g28674_i0forward_frame_1 - 4.9e-09 36.2 0.1 6.8e-09 35.7 0.1 1.3 1 0 0 1 1 1 1 MAPEG family Phage_Coat_B PF05356.11 NODE_35749_length_602_cov_923.107584_g28674_i0forward_frame_1 - 0.15 12.0 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 Phage Coat protein B Alanine_zipper PF11839.8 NODE_35743_length_603_cov_2.952465_g28669_i0reverse_frame_1 - 0.0065 16.8 2.2 0.0093 16.3 1.3 1.7 2 0 0 2 2 2 1 Alanine-zipper, major outer membrane lipoprotein RRF PF01765.19 NODE_35743_length_603_cov_2.952465_g28669_i0reverse_frame_1 - 0.03 14.3 0.4 0.04 13.9 0.4 1.2 1 0 0 1 1 1 0 Ribosome recycling factor Porin_3 PF01459.22 NODE_35736_length_603_cov_29.457746_g28662_i0forward_frame_1 - 2.2e-21 76.5 3.1 2.8e-21 76.2 3.1 1.1 1 0 0 1 1 1 1 Eukaryotic porin DUF45 PF01863.17 NODE_35731_length_603_cov_73.052817_g28657_i0reverse_frame_1 - 0.051 13.6 0.4 0.07 13.2 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF45 FlaC_arch PF05377.11 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.0019 18.6 7.9 1.8 9.0 0.1 3.6 3 1 0 3 3 3 2 Flagella accessory protein C (FlaC) Laminin_II PF06009.12 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.012 15.6 5.6 0.064 13.3 1.9 2.1 2 0 0 2 2 2 0 Laminin Domain II CLZ PF16526.5 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.043 14.2 3.2 0.83 10.1 0.2 3.0 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF1664 PF07889.12 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.061 13.4 3.1 0.37 10.8 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) BRE1 PF08647.11 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.12 12.5 10.6 1.8 8.7 3.2 2.6 2 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase LMBR1 PF04791.16 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.65 8.8 3.6 0.77 8.6 3.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein BST2 PF16716.5 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.81 10.3 6.8 0.62 10.7 1.0 2.8 2 2 0 2 2 2 0 Bone marrow stromal antigen 2 FlxA PF14282.6 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 1.7 8.7 6.3 1.5 8.9 2.2 2.3 2 1 0 2 2 2 0 FlxA-like protein MORN PF02493.20 NODE_35671_length_604_cov_209.652021_g28606_i0reverse_frame_3 - 0.00031 20.5 4.4 0.00059 19.6 4.4 1.5 1 0 0 1 1 1 1 MORN repeat MORN PF02493.20 NODE_35671_length_604_cov_209.652021_g28606_i0reverse_frame_2 - 1.6e-12 46.5 3.5 0.00035 20.3 0.2 4.3 5 0 0 5 5 5 3 MORN repeat PqiA PF04403.13 NODE_35671_length_604_cov_209.652021_g28606_i0forward_frame_3 - 0.7 9.7 6.9 0.12 12.2 3.2 1.6 2 0 0 2 2 2 0 Paraquat-inducible protein A zf-RING_4 PF14570.6 NODE_35657_length_605_cov_2.892982_g28596_i0forward_frame_3 - 0.093 12.5 0.7 0.093 12.5 0.7 1.9 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Muted PF14942.6 NODE_35656_length_605_cov_3.100000_g28595_i0reverse_frame_3 - 0.36 11.2 7.8 0.054 13.8 3.2 1.9 2 0 0 2 2 2 0 Organelle biogenesis, Muted-like protein DUF4207 PF13904.6 NODE_35656_length_605_cov_3.100000_g28595_i0reverse_frame_2 - 5.1e-05 23.1 18.0 5.1e-05 23.1 18.0 2.2 2 1 1 3 3 3 2 Domain of unknown function (DUF4207) zf-C2H2 PF00096.26 NODE_35642_length_605_cov_93.180702_g28581_i0reverse_frame_3 - 0.00044 20.5 14.9 0.52 10.9 0.2 3.7 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_35642_length_605_cov_93.180702_g28581_i0reverse_frame_3 - 0.016 16.0 13.5 1 10.4 0.1 3.6 3 0 0 3 3 3 0 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_35642_length_605_cov_93.180702_g28581_i0reverse_frame_3 - 0.13 12.8 8.6 0.98 10.0 0.0 3.2 3 0 0 3 3 3 0 Zinc-finger double domain COPI_assoc PF08507.10 NODE_35640_length_605_cov_105.580702_g28579_i0reverse_frame_3 - 1.1e-14 54.6 4.2 1.6e-14 54.1 4.2 1.2 1 0 0 1 1 1 1 COPI associated protein DUF1404 PF07185.11 NODE_35640_length_605_cov_105.580702_g28579_i0reverse_frame_3 - 0.0071 16.1 7.7 0.011 15.5 7.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1404) Abhydro_lipase PF04083.16 NODE_35621_length_605_cov_281.636842_g28559_i1reverse_frame_3 - 2.7e-19 68.5 0.0 4.8e-19 67.7 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_35621_length_605_cov_281.636842_g28559_i1reverse_frame_3 - 0.0016 18.2 0.1 0.002 17.8 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 NODE_35619_length_605_cov_320.938596_g28559_i0forward_frame_3 - 2.7e-19 68.5 0.0 4.8e-19 67.7 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_35619_length_605_cov_320.938596_g28559_i0forward_frame_3 - 0.0007 19.3 0.1 0.00094 18.9 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Paramyx_P_V_C PF03210.13 NODE_35615_length_605_cov_342.505263_g28556_i0reverse_frame_2 - 0.028 14.2 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal POTRA PF07244.15 NODE_35615_length_605_cov_342.505263_g28556_i0reverse_frame_2 - 0.087 13.4 0.0 1.1 9.9 0.1 2.3 1 1 0 2 2 2 0 Surface antigen variable number repeat DUF3958 PF13125.6 NODE_35605_length_605_cov_1120.180702_g28548_i0reverse_frame_3 - 0.0046 17.1 0.4 0.0078 16.4 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3958) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks99.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks99.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks99.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks99.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:18:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NIF PF03031.18 ORF39450 - 4.1e-45 153.4 0.0 7.1e-45 152.6 0.0 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase HAD PF12710.7 ORF39450 - 0.00012 22.6 0.2 0.00053 20.4 0.1 2.0 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Tma16 PF11176.8 NODE_4495_length_1785_cov_13.000000_g3206_i0reverse_frame_3 - 1.2 9.0 10.8 0.26 11.2 5.6 2.1 2 0 0 2 2 2 0 Translation machinery-associated protein 16 YdjM PF04307.14 NODE_4495_length_1785_cov_13.000000_g3206_i0forward_frame_3 - 4.1 6.7 7.5 0.6 9.4 2.0 2.4 2 1 0 2 2 2 0 LexA-binding, inner membrane-associated putative hydrolase AMP-binding PF00501.28 ORF98122 - 1.3e-89 300.7 0.0 1.6e-89 300.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF98122 - 0.0005 21.0 0.0 0.0011 19.9 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain IFP_35_N PF07334.13 ORF98122 - 0.12 12.5 2.1 2.2 8.4 0.3 2.5 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus TPR_12 PF13424.6 ORF94708 - 3.3e-70 232.4 56.8 1.7e-14 53.9 4.1 6.6 3 1 5 8 8 8 7 Tetratricopeptide repeat TPR_10 PF13374.6 ORF94708 - 1.1e-66 219.1 29.5 8.4e-11 41.4 0.7 7.7 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_1 PF00515.28 ORF94708 - 5.9e-11 41.7 0.9 1.6 8.7 0.0 7.7 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF94708 - 1.2e-08 34.5 0.3 0.89 9.9 0.0 6.6 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF94708 - 3.2e-07 30.3 27.1 0.00031 21.1 0.9 8.0 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF94708 - 7.6e-07 28.7 22.5 0.11 12.5 0.2 7.9 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF94708 - 9e-07 28.6 18.0 0.97 9.7 0.0 8.1 8 0 0 8 8 8 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF94708 - 5.5e-05 23.7 35.9 0.1 13.4 0.6 8.5 5 2 4 9 9 8 1 Tetratricopeptide repeat TPR_5 PF12688.7 ORF94708 - 0.00027 21.2 21.5 0.0046 17.2 2.0 4.3 1 1 4 5 5 5 2 Tetratrico peptide repeat Vac_Fusion PF02346.16 ORF94708 - 0.0004 19.9 4.9 1 9.1 0.1 5.0 5 1 1 6 6 6 1 Chordopoxvirus multifunctional envelope protein A27 TPR_20 PF14561.6 ORF94708 - 0.051 13.9 14.8 0.96 9.8 1.5 5.0 1 1 2 4 4 4 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF94708 - 0.058 13.8 3.2 59 4.4 0.0 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF94708 - 0.1 13.3 28.0 0.081 13.6 3.4 6.8 5 1 1 6 6 6 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF94708 - 0.18 12.5 6.0 7.6 7.4 0.0 5.2 6 0 0 6 6 5 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF94708 - 0.29 11.4 8.3 21 5.4 0.0 5.4 5 1 0 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 HEAT_PBS PF03130.16 ORF94708 - 0.4 11.5 4.3 3.6 8.5 0.1 3.7 3 0 0 3 3 2 0 PBS lyase HEAT-like repeat DUF5588 PF17826.1 ORF94708 - 0.42 9.4 16.7 1.2 8.0 0.1 5.4 2 2 3 6 6 6 0 Family of unknown function (DUF5588) TPR_19 PF14559.6 ORF94708 - 0.93 10.0 25.8 0.73 10.4 1.5 5.6 3 1 5 8 8 8 0 Tetratricopeptide repeat HSP90 PF00183.18 ORF17831 - 5.1e-235 781.2 30.3 6.4e-235 780.9 30.3 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF17831 - 0.086 12.8 1.0 0.34 10.9 0.1 2.2 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF17831 - 0.1 12.6 1.2 0.2 11.7 0.1 2.0 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF17831 - 0.69 9.9 2.8 27 4.8 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain Amidinotransf PF02274.17 ORF17831 - 6.1 5.8 9.1 0.49 9.4 0.1 2.2 2 0 0 2 2 2 0 Amidinotransferase DUF2201_N PF13203.6 ORF10558 - 0.0085 15.7 0.0 1.4 8.5 0.0 2.3 1 1 0 1 1 1 1 Putative metallopeptidase domain CSG2 PF16965.5 ORF10558 - 0.96 8.3 3.1 0.63 8.9 0.3 2.1 2 1 1 3 3 3 0 Ceramide synthase regulator DUF4834 PF16118.5 ORF10558 - 1.1 10.3 0.0 1.1 10.3 0.0 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4834) Phage_holin_3_6 PF07332.11 ORF10558 - 1.9 8.5 8.6 0.075 13.1 1.5 2.1 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III tRNA-synt_1d PF00750.19 ORF101502 - 1e-113 379.8 1.1 1.5e-113 379.3 1.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF101502 - 1.9e-22 79.6 0.1 4.6e-22 78.4 0.1 1.7 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 ORF101502 - 7.7e-06 26.4 0.1 4.5e-05 23.9 0.1 2.3 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF101502 - 0.019 14.3 0.0 0.034 13.5 0.0 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain DNA_pol_B PF00136.21 ORF88660 - 3.8e-105 352.2 0.1 4.7e-105 351.9 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase family B zf-DNA_Pol PF08996.10 ORF88660 - 3e-06 27.1 0.4 7.1e-06 25.9 0.4 1.6 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger Carbpep_Y_N PF05388.11 ORF88660 - 0.6 10.6 3.8 0.32 11.5 0.4 2.3 3 0 0 3 3 3 0 Carboxypeptidase Y pro-peptide Ion_trans PF00520.31 ORF87142 - 7.6e-26 90.8 8.7 9.9e-26 90.5 8.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF87142 - 0.0013 18.5 1.7 0.014 15.3 0.4 3.2 3 0 0 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 ORF87142 - 0.011 16.1 0.9 0.16 12.4 0.2 2.6 2 1 1 3 3 3 0 EF-hand domain pair DUF485 PF04341.12 ORF87142 - 0.058 13.3 2.5 5.8 6.9 1.4 2.6 2 0 0 2 2 2 0 Protein of unknown function, DUF485 EF-hand_1 PF00036.32 ORF87142 - 0.083 12.5 0.1 0.083 12.5 0.1 2.5 3 0 0 3 3 3 0 EF hand DUF1700 PF08006.11 ORF87142 - 0.23 11.0 2.2 4.1 6.9 1.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) Laminin_II PF06009.12 ORF83639 - 0.0038 17.2 38.1 0.052 13.6 10.0 5.2 3 2 2 5 5 5 2 Laminin Domain II CK2S PF15011.6 ORF83639 - 0.0071 16.2 8.7 0.27 11.1 2.1 3.2 1 1 1 2 2 2 2 Casein Kinase 2 substrate Spectrin PF00435.21 ORF83639 - 0.0078 16.7 2.3 0.0078 16.7 2.3 5.8 3 2 2 5 5 5 2 Spectrin repeat Noelin-1 PF12308.8 ORF83639 - 0.015 15.2 0.1 0.015 15.2 0.1 5.3 3 1 2 6 6 6 0 Neurogenesis glycoprotein DUF1664 PF07889.12 ORF83639 - 0.096 12.7 43.2 0.27 11.3 4.8 6.3 3 3 2 6 6 6 0 Protein of unknown function (DUF1664) HrpB7 PF09486.10 ORF83639 - 0.25 11.7 17.4 0.33 11.3 2.7 5.5 3 2 1 5 5 5 0 Bacterial type III secretion protein (HrpB7) T3SS_needle_E PF08988.10 ORF83639 - 1 9.6 4.4 13 6.0 0.2 4.6 4 1 0 4 4 4 0 Type III secretion system, cytoplasmic E component of needle BLOC1_2 PF10046.9 ORF83639 - 1.2 9.5 46.9 0.039 14.3 3.0 7.2 5 3 3 8 8 8 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SpoOE-like PF09388.10 ORF83639 - 1.7 8.6 11.9 0.11 12.5 2.2 3.6 3 0 0 3 3 3 0 Spo0E like sporulation regulatory protein Exonuc_VII_L PF02601.15 ORF83639 - 5.2 6.5 31.2 0.45 10.0 6.0 3.8 1 1 1 3 3 3 0 Exonuclease VII, large subunit DUF948 PF06103.11 ORF83639 - 8.2 6.8 23.7 4.4 7.6 2.3 5.3 4 2 1 5 5 5 0 Bacterial protein of unknown function (DUF948) DNA_pol_B PF00136.21 ORF79506 - 3.8e-105 352.2 0.1 4.7e-105 351.9 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase family B zf-DNA_Pol PF08996.10 ORF79506 - 3e-06 27.1 0.4 7.1e-06 25.9 0.4 1.6 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger Carbpep_Y_N PF05388.11 ORF79506 - 0.6 10.6 3.8 0.32 11.5 0.4 2.3 3 0 0 3 3 3 0 Carboxypeptidase Y pro-peptide Anoctamin PF04547.12 ORF62417 - 2e-50 172.0 5.1 2.8e-50 171.5 5.1 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel DUF1195 PF06708.11 ORF62417 - 0.13 12.0 0.1 0.28 10.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1195) DUF4064 PF13273.6 ORF62417 - 0.61 10.4 4.9 4.5 7.6 0.0 4.0 3 2 2 5 5 5 0 Protein of unknown function (DUF4064) RSN1_7TM PF02714.15 ORF62417 - 0.79 9.0 9.7 0.52 9.6 3.5 3.0 3 0 0 3 3 3 0 Calcium-dependent channel, 7TM region, putative phosphate DUF2207 PF09972.9 ORF62417 - 1.4 7.6 9.3 0.38 9.5 0.3 2.9 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) Presenilin PF01080.17 ORF62417 - 3 6.5 5.5 1.6 7.4 3.4 1.5 2 0 0 2 2 2 0 Presenilin BBS1 PF14779.6 ORF28098 - 7e-85 284.5 0.0 3.2e-82 275.8 0.0 2.3 2 0 0 2 2 2 2 Ciliary BBSome complex subunit 1 PHTB1_N PF14727.6 ORF28098 - 7.8e-13 48.6 0.2 0.0001 21.8 0.1 3.1 2 1 0 3 3 3 3 PTHB1 N-terminus BBS2_Mid PF14783.6 ORF28098 - 1.2e-07 31.7 0.2 0.014 15.5 0.1 3.8 2 1 2 4 4 4 2 Ciliary BBSome complex subunit 2, middle region PQQ_3 PF13570.6 ORF28098 - 0.06 13.9 0.1 13 6.4 0.0 4.2 5 0 0 5 5 5 0 PQQ-like domain Dynein_C PF18199.1 ORF14115 - 2.1e-110 368.8 0.0 3.2e-110 368.2 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF14115 - 1.5e-56 190.7 0.1 2.4e-56 190.0 0.1 1.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF14115 - 3.7e-35 120.6 0.1 1.3e-34 118.8 0.0 1.9 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Glyco_hydro_38N PF01074.22 ORF96055 - 2.3e-20 73.1 0.3 3.4e-20 72.6 0.3 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF96055 - 3.7e-15 55.8 0.0 7e-15 55.0 0.0 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38C PF07748.13 ORF96055 - 7.8e-15 55.5 0.0 1.3e-14 54.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Peptidase_S10 PF00450.22 ORF87272 - 6.8e-78 262.9 0.0 9.8e-78 262.4 0.0 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF87272 - 4.2e-05 23.8 13.9 9.9e-05 22.6 13.9 1.7 1 0 0 1 1 1 1 EGF-like domain EGF_Tenascin PF18720.1 ORF87272 - 7.8e-05 22.6 3.9 0.00016 21.6 3.9 1.5 1 0 0 1 1 1 1 Tenascin EGF domain Aminotran_1_2 PF00155.21 ORF75147 - 2e-53 181.9 0.0 2.4e-53 181.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Guanylate_kin PF00625.21 ORF75147 - 1.6e-16 60.5 0.0 2.5e-16 59.9 0.0 1.3 1 0 0 1 1 1 1 Guanylate kinase Aminotran_5 PF00266.19 ORF75147 - 0.011 14.7 0.0 0.02 13.8 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF75147 - 0.015 13.8 0.0 0.042 12.4 0.0 1.7 2 0 0 2 2 2 0 Cys/Met metabolism PLP-dependent enzyme Phospholip_B PF04916.13 ORF74456 - 2.5e-145 485.1 1.7 3.1e-145 484.7 1.7 1.0 1 0 0 1 1 1 1 Phospholipase B NOG1_N PF17835.1 ORF60570 - 2.9e-24 85.9 0.5 2.9e-24 85.9 0.5 2.7 2 0 0 2 2 2 1 NOG1 N-terminal helical domain NOG1 PF06858.14 ORF60570 - 1.2e-20 73.0 1.4 1.2e-20 73.0 1.4 2.5 2 1 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) NOGCT PF08155.11 ORF60570 - 1.4e-17 63.4 0.4 3.6e-17 62.1 0.4 1.8 1 0 0 1 1 1 1 NOGCT (NUC087) domain MMR_HSR1 PF01926.23 ORF60570 - 1.6e-15 57.2 0.0 4.7e-15 55.7 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF60570 - 7.7e-08 32.0 0.4 7.4e-07 28.8 0.4 2.2 1 1 0 1 1 1 1 Ferrous iron transport protein B AIG1 PF04548.16 ORF60570 - 0.0043 16.4 0.3 0.0043 16.4 0.3 1.8 2 0 0 2 2 2 1 AIG1 family Ead_Ea22 PF13935.6 ORF60570 - 0.005 17.5 0.8 0.015 15.9 0.8 1.9 1 0 0 1 1 1 1 Ead/Ea22-like protein Dynamin_N PF00350.23 ORF60570 - 0.0086 16.2 7.3 1.2 9.1 0.0 3.6 2 1 2 4 4 4 2 Dynamin family FtsX_ECD PF18075.1 ORF60570 - 0.26 11.9 6.2 21 5.8 0.0 3.7 3 1 0 3 3 3 0 FtsX extracellular domain CemA PF03040.14 ORF60570 - 5.1 7.0 6.8 6.4 6.6 3.5 2.3 2 0 0 2 2 2 0 CemA family Exonuc_V_gamma PF04257.14 ORF47564 - 9.5e-101 338.3 0.3 3.7e-100 336.3 0.0 1.8 2 0 0 2 2 2 1 Exodeoxyribonuclease V, gamma subunit RecC_C PF17946.1 ORF47564 - 2.7e-66 223.1 2.0 5.3e-66 222.2 2.0 1.5 1 0 0 1 1 1 1 RecC C-terminal domain DUF475 PF04332.15 ORF1172 - 0.0042 16.9 0.2 0.0072 16.1 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF475) ATP-grasp_4 PF13535.6 NODE_4606_length_1773_cov_40.747411_g3285_i0reverse_frame_1 - 0.0061 16.2 0.0 0.01 15.4 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain DUF760 PF05542.11 ORF21848 - 0.011 16.1 0.2 0.43 11.0 0.1 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF760) TPR_14 PF13428.6 ORF110219 - 0.0032 18.1 0.0 0.15 12.9 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 ORF110219 - 0.0059 16.6 0.4 0.0059 16.6 0.4 3.5 3 1 0 3 3 3 1 Mad3/BUB1 homology region 1 TPR_15 PF13429.6 ORF110219 - 0.062 12.5 0.1 1.2 8.3 0.0 2.5 2 1 0 2 2 2 0 Tetratricopeptide repeat ROF PF07073.12 NODE_4606_length_1773_cov_40.747411_g3285_i0forward_frame_3 - 0.011 15.9 0.1 0.035 14.3 0.1 1.8 1 0 0 1 1 1 0 Modulator of Rho-dependent transcription termination (ROF) Tubulin PF00091.25 ORF54073 - 1.3e-20 74.5 0.0 1.9e-20 73.9 0.0 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF54073 - 2.1e-08 34.4 0.0 2.1e-07 31.1 0.0 2.2 2 0 0 2 2 2 1 Tubulin C-terminal domain mRNA_decap_C PF16741.5 ORF54073 - 0.12 11.7 0.2 0.12 11.7 0.2 1.6 2 0 0 2 2 2 0 mRNA-decapping enzyme C-terminus PARP PF00644.20 ORF3539 - 7.7e-16 58.3 2.4 1.2e-14 54.4 0.3 2.9 2 1 0 2 2 2 1 Poly(ADP-ribose) polymerase catalytic domain ZZ PF00569.17 ORF3539 - 3.2e-12 46.1 48.9 0.0013 18.5 2.9 5.7 5 0 0 5 5 5 5 Zinc finger, ZZ type C1_2 PF03107.16 ORF3539 - 2.3e-08 34.2 45.0 0.062 13.6 1.5 5.8 5 0 0 5 5 5 5 C1 domain zf-B_box PF00643.24 ORF3539 - 9.5e-06 25.7 48.2 0.047 13.8 3.1 5.6 5 0 0 5 5 5 5 B-box zinc finger zf-RING_4 PF14570.6 ORF3539 - 0.039 13.7 45.7 0.4 10.5 3.6 5.7 5 0 0 5 5 5 0 RING/Ubox like zinc-binding domain Furin-like_2 PF15913.5 ORF3539 - 0.47 10.6 47.5 1.6 8.9 2.3 5.6 5 0 0 5 5 5 0 Furin-like repeat, cysteine-rich Zn_Tnp_IS1 PF03811.13 ORF3539 - 0.9 9.3 27.4 5.7 6.8 1.1 6.1 5 0 0 5 5 5 0 InsA N-terminal domain CitMHS PF03600.16 ORF17085 - 2e-27 96.2 24.3 2.5e-19 69.6 0.7 2.1 2 0 0 2 2 2 2 Citrate transporter TrkA_C PF02080.21 ORF17085 - 1.6e-06 27.8 0.0 0.081 12.8 0.0 3.5 3 0 0 3 3 3 3 TrkA-C domain FYVE PF01363.21 ORF15213 - 1.9e-06 27.9 8.1 4.2e-06 26.8 8.1 1.5 1 0 0 1 1 1 1 FYVE zinc finger FH2 PF02181.23 ORF15213 - 0.0015 17.7 0.1 0.0025 17.0 0.1 1.2 1 0 0 1 1 1 1 Formin Homology 2 Domain EAL PF00563.20 ORF92709 - 1.4e-66 224.4 0.3 2e-66 223.9 0.3 1.2 1 0 0 1 1 1 1 EAL domain MASE1 PF05231.14 ORF92709 - 4.2e-38 131.2 10.7 5.4e-38 130.8 10.7 1.1 1 0 0 1 1 1 1 MASE1 Sm_multidrug_ex PF06695.11 ORF92709 - 0.2 12.3 1.8 0.38 11.4 0.2 2.3 3 0 0 3 3 3 0 Putative small multi-drug export protein CHAT PF12770.7 ORF81245 - 1.9e-40 139.1 0.4 2.4e-27 96.1 0.2 2.2 2 0 0 2 2 2 2 CHAT domain ZZ PF00569.17 ORF81245 - 3.8e-11 42.6 23.3 1.5e-09 37.5 7.5 2.4 2 0 0 2 2 2 2 Zinc finger, ZZ type zf-B_box PF00643.24 ORF81245 - 0.12 12.6 18.1 0.47 10.7 7.3 2.4 2 0 0 2 2 2 0 B-box zinc finger C1_2 PF03107.16 ORF81245 - 3.5 8.0 30.8 2 8.8 9.2 2.6 2 0 0 2 2 2 0 C1 domain Cullin PF00888.22 ORF57458 - 1.1e-133 447.1 20.5 1.8e-133 446.4 20.5 1.3 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF57458 - 1.9e-06 27.8 3.5 4.9e-06 26.5 1.6 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain Mad3_BUB1_I PF08311.12 ORF57458 - 0.056 13.4 1.5 0.15 12.1 0.4 2.3 2 0 0 2 2 2 0 Mad3/BUB1 homology region 1 SMC_N PF02463.19 ORF47394 - 2.2e-23 82.8 16.6 5.5e-23 81.6 16.6 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF47394 - 0.00025 21.0 2.3 0.00025 21.0 2.3 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system CENP-F_leu_zip PF10473.9 ORF47394 - 0.0019 18.2 27.6 0.0019 18.2 27.6 4.7 2 1 3 5 5 5 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SMC_hinge PF06470.13 ORF47394 - 0.0084 16.4 0.2 0.065 13.5 0.0 2.4 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain XhlA PF10779.9 ORF47394 - 0.026 14.7 3.8 0.026 14.7 3.8 6.1 5 1 1 6 6 6 0 Haemolysin XhlA HsbA PF12296.8 ORF47394 - 0.43 11.0 8.3 5.3 7.5 2.0 3.7 2 2 1 3 3 3 0 Hydrophobic surface binding protein A DUF5104 PF17117.5 ORF47394 - 2.9 8.4 11.3 0.98 9.9 0.9 4.1 4 1 1 5 5 5 0 Domain of unknown function (DUF5104) T2SSG PF08334.11 ORF47394 - 4.9 7.3 9.0 0.85 9.7 0.4 3.4 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein G Glyco_hydro81C PF17652.1 ORF4091 - 2.1e-91 306.8 0.0 3.2e-91 306.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 81 C-terminal domain Ephrin_rec_like PF07699.13 ORF4091 - 0.00022 20.9 17.0 0.0015 18.2 5.7 3.4 1 1 3 4 4 4 4 Putative ephrin-receptor like NCD3G PF07562.14 ORF4091 - 0.0053 16.7 15.7 0.0092 15.9 0.7 3.0 3 0 0 3 3 3 2 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 ORF4091 - 2.7 8.5 12.6 3.9 8.0 2.2 3.8 1 1 3 4 4 4 0 TNFR/NGFR cysteine-rich region Glycos_transf_2 PF00535.26 ORF3924 - 4.7e-18 65.6 0.0 7.6e-18 64.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF3924 - 2.1e-07 31.0 0.0 2.9e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 ORF3924 - 1.2e-05 25.0 0.0 1.6e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_7C PF02709.14 ORF3924 - 2.5e-05 23.8 0.7 5.3e-05 22.8 0.7 1.5 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Ricin_B_lectin PF00652.22 ORF3924 - 7.8e-05 22.9 2.3 7.8e-05 22.9 2.3 2.5 3 1 0 3 3 3 1 Ricin-type beta-trefoil lectin domain Ribosomal_L18 PF17135.4 ORF3924 - 0.098 12.0 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e Herpes_UL6 PF01763.16 ORF24933 - 0.083 11.4 1.2 0.13 10.8 0.7 1.4 1 1 0 1 1 1 0 Herpesvirus UL6 like DUF4635 PF15466.6 ORF24933 - 0.095 12.2 0.9 0.64 9.5 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4635) Sec3_C_2 PF15278.6 ORF24933 - 0.11 12.9 0.1 0.54 10.6 0.1 2.2 1 0 0 1 1 1 0 Sec3 exocyst complex subunit DUF5025 PF16428.5 ORF24933 - 0.12 12.5 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5025) KAP_NTPase PF07693.14 ORF24933 - 0.26 10.5 1.6 0.48 9.6 1.6 1.3 1 0 0 1 1 1 0 KAP family P-loop domain ZnuA PF01297.17 ORF24933 - 0.45 9.9 2.2 0.33 10.3 0.6 1.6 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic XLF PF09302.11 ORF24933 - 2.1 8.5 5.2 0.79 9.9 0.3 2.5 2 1 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Baculo_PEP_C PF04513.12 ORF24933 - 3.9 7.5 8.8 20 5.2 0.2 3.3 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Apolipoprotein PF01442.18 ORF24933 - 6.9 6.5 20.3 4.2 7.2 10.7 2.7 2 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain PhaG_MnhG_YufB PF03334.14 ORF2045 - 0.53 10.6 7.8 0.41 10.9 4.9 2.2 2 0 0 2 2 2 0 Na+/H+ antiporter subunit SMC_N PF02463.19 ORF111661 - 2.2e-23 82.8 16.6 5.5e-23 81.6 16.6 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF111661 - 0.00025 21.0 2.3 0.00025 21.0 2.3 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system CENP-F_leu_zip PF10473.9 ORF111661 - 0.0019 18.2 27.6 0.0019 18.2 27.6 4.7 2 1 3 5 5 5 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SMC_hinge PF06470.13 ORF111661 - 0.0084 16.4 0.2 0.065 13.5 0.0 2.4 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain XhlA PF10779.9 ORF111661 - 0.026 14.7 3.8 0.026 14.7 3.8 6.1 5 1 1 6 6 6 0 Haemolysin XhlA HsbA PF12296.8 ORF111661 - 0.43 11.0 8.3 5.3 7.5 2.0 3.7 2 2 1 3 3 3 0 Hydrophobic surface binding protein A DUF5104 PF17117.5 ORF111661 - 2.9 8.4 11.3 0.98 9.9 0.9 4.1 4 1 1 5 5 5 0 Domain of unknown function (DUF5104) T2SSG PF08334.11 ORF111661 - 4.9 7.3 9.0 0.85 9.7 0.4 3.4 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein G EF-hand_1 PF00036.32 ORF102494 - 4.2e-20 69.7 14.9 8.3e-05 21.9 0.2 8.7 9 0 0 9 9 9 4 EF hand EF-hand_6 PF13405.6 ORF102494 - 1.3e-17 62.1 15.4 0.0049 16.7 0.1 8.3 9 0 0 9 9 9 5 EF-hand domain EF-hand_7 PF13499.6 ORF102494 - 3.7e-16 59.3 13.5 0.00091 19.6 0.0 6.6 3 3 2 6 6 6 5 EF-hand domain pair EF-hand_5 PF13202.6 ORF102494 - 2e-10 39.7 6.5 0.048 13.2 0.0 5.6 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF102494 - 2.6e-08 33.6 3.5 0.37 10.7 0.1 5.6 4 1 1 5 5 5 3 EF-hand domain pair Caleosin PF05042.13 ORF102494 - 6.2e-05 23.0 0.2 0.057 13.3 0.0 4.0 3 1 0 4 4 4 1 Caleosin related protein S_100 PF01023.19 ORF102494 - 0.019 14.7 1.0 15 5.4 0.0 3.7 3 0 0 3 3 3 0 S-100/ICaBP type calcium binding domain DUF1488 PF07369.11 ORF102494 - 0.057 13.4 1.9 0.55 10.3 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1488) Radical_SAM PF04055.21 ORF102494 - 0.098 13.0 0.3 0.37 11.2 0.0 2.2 3 1 0 3 3 3 0 Radical SAM superfamily Med18 PF09637.10 ORF102494 - 0.12 12.2 0.1 1.2 8.9 0.1 2.3 1 1 0 1 1 1 0 Med18 protein EF-hand_4 PF12763.7 ORF102494 - 0.24 11.4 3.8 52 3.9 0.0 4.7 5 0 0 5 5 5 0 Cytoskeletal-regulatory complex EF hand EF-hand_7 PF13499.6 ORF95038 - 2.9e-11 43.7 0.7 8.7e-11 42.1 0.4 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF95038 - 1.4e-10 40.0 0.2 0.00052 19.4 0.0 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF95038 - 1.4e-09 37.1 0.1 0.00053 19.7 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF95038 - 9.1e-08 31.8 2.1 0.00019 21.2 0.1 3.4 2 1 1 3 3 3 2 EF-hand domain pair Thioredoxin PF00085.20 ORF95038 - 6.4e-06 26.1 0.0 1.3e-05 25.1 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin EF-hand_5 PF13202.6 ORF95038 - 7.4e-06 25.2 0.3 0.13 11.8 0.1 3.4 3 0 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF95038 - 0.00051 20.3 0.0 0.001 19.4 0.0 1.4 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF95038 - 0.22 11.5 1.2 2.5 8.1 0.2 2.3 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand MT PF12777.7 ORF70919 - 1.8e-10 40.4 8.0 2.6e-10 39.9 8.0 1.2 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor T3SSipB PF16535.5 ORF70919 - 0.0047 17.4 0.9 0.0047 17.4 0.9 2.4 3 0 0 3 3 3 1 Type III cell invasion protein SipB EDR1 PF14381.6 ORF70919 - 0.064 13.0 1.1 0.13 12.0 1.1 1.4 1 0 0 1 1 1 0 Ethylene-responsive protein kinase Le-CTR1 Baculo_PEP_C PF04513.12 ORF70919 - 0.086 12.9 0.9 0.3 11.1 0.9 1.9 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1700 PF08006.11 ORF70919 - 0.11 12.0 0.2 0.24 10.9 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF1465 PF07323.12 ORF70919 - 0.23 11.3 4.1 0.18 11.6 1.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1465) zf-CpG_bind_C PF12269.8 ORF70919 - 1.8 8.3 6.2 0.93 9.2 3.0 2.1 1 1 1 2 2 2 0 CpG binding protein zinc finger C terminal domain GA-like PF17573.2 ORF70919 - 2.4 8.1 5.7 25 4.9 0.0 3.2 3 0 0 3 3 3 0 GA-like domain HSBP1 PF06825.12 ORF70919 - 8 6.4 9.3 17 5.4 4.2 2.9 2 1 1 3 3 3 0 Heat shock factor binding protein 1 FYVE PF01363.21 ORF44885 - 1.9e-06 27.9 8.1 4.2e-06 26.8 8.1 1.5 1 0 0 1 1 1 1 FYVE zinc finger FH2 PF02181.23 ORF44885 - 0.0015 17.7 0.1 0.0025 17.0 0.1 1.3 1 0 0 1 1 1 1 Formin Homology 2 Domain FYVE PF01363.21 ORF33396 - 1.9e-06 27.9 8.1 4.2e-06 26.8 8.1 1.5 1 0 0 1 1 1 1 FYVE zinc finger FH2 PF02181.23 ORF33396 - 0.0015 17.7 0.1 0.0025 17.0 0.1 1.3 1 0 0 1 1 1 1 Formin Homology 2 Domain CSG2 PF16965.5 ORF108676 - 0.56 9.1 2.3 0.61 9.0 0.2 2.1 2 1 0 2 2 2 0 Ceramide synthase regulator Phage_holin_3_6 PF07332.11 ORF108676 - 1.9 8.6 8.6 0.074 13.1 1.5 2.2 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III Chloroa_b-bind PF00504.21 ORF97289 - 9.2e-97 322.1 15.0 2.7e-34 119.0 0.1 3.9 4 0 0 4 4 4 3 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF97289 - 0.0076 16.5 0.0 13 6.1 0.0 3.3 5 0 0 5 5 5 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF97289 - 0.0078 16.6 0.2 10 6.6 0.0 3.0 3 0 0 3 3 3 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF97289 - 0.03 14.4 0.0 13 5.9 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF97289 - 0.099 12.6 0.0 21 5.1 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal Chloroa_b-bind PF00504.21 ORF71436 - 9.2e-97 322.1 15.0 2.7e-34 119.0 0.1 3.9 4 0 0 4 4 4 3 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF71436 - 0.0076 16.5 0.0 13 6.1 0.0 3.3 5 0 0 5 5 5 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF71436 - 0.0078 16.6 0.2 10 6.6 0.0 3.0 3 0 0 3 3 3 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF71436 - 0.03 14.4 0.0 13 5.9 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF71436 - 0.099 12.6 0.0 21 5.1 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal PKD_channel PF08016.12 ORF56624 - 1.8e-20 73.0 20.4 4.3e-18 65.2 12.9 2.1 2 0 0 2 2 2 2 Polycystin cation channel Ion_trans PF00520.31 ORF56624 - 2.8e-07 30.0 22.1 4.7e-07 29.3 22.1 1.3 1 0 0 1 1 1 1 Ion transport protein ZapB PF06005.12 ORF56624 - 0.03 14.8 1.3 0.03 14.8 1.3 2.2 3 0 0 3 3 3 0 Cell division protein ZapB YabA PF06156.13 ORF56624 - 0.19 12.3 7.6 0.056 14.1 3.1 2.2 2 0 0 2 2 2 0 Initiation control protein YabA ThrE PF06738.12 ORF33525 - 1.4e-06 27.9 12.8 1.4e-06 27.9 12.8 1.9 2 0 0 2 2 2 1 Putative threonine/serine exporter CPP1-like PF11833.8 ORF33525 - 0.084 12.5 0.7 10 5.7 0.0 2.5 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like PDT PF00800.18 ORF65638 - 1.1e-52 178.5 0.0 2.8e-52 177.2 0.0 1.7 2 0 0 2 2 2 1 Prephenate dehydratase PDH PF02153.17 ORF65638 - 2.6e-13 49.6 0.0 8.3e-13 47.9 0.0 1.7 2 0 0 2 2 2 1 Prephenate dehydrogenase ACT PF01842.25 ORF65638 - 0.0033 17.2 0.0 0.015 15.1 0.0 2.1 2 0 0 2 2 2 1 ACT domain F420_oxidored PF03807.17 ORF65638 - 0.0097 16.5 0.0 0.022 15.3 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent SnoaL_2 PF12680.7 ORF65638 - 0.064 13.9 0.0 0.45 11.2 0.0 2.3 2 0 0 2 2 2 0 SnoaL-like domain EKLF_TAD1 PF16832.5 ORF65638 - 0.18 11.7 0.2 0.33 10.9 0.2 1.4 1 0 0 1 1 1 0 Erythroid krueppel-like transcription factor, transactivation 1 tRNA-synt_2b PF00587.25 ORF16807 - 1.2e-30 106.8 0.0 1.4e-26 93.6 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 ORF16807 - 1.6e-17 63.5 0.3 3.1e-17 62.5 0.3 1.5 1 0 0 1 1 1 1 Anticodon binding domain tRNA_SAD PF07973.14 ORF16807 - 1.4e-06 28.3 0.0 2.9e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain SurA_N_3 PF13624.6 ORF16807 - 0.0021 17.9 1.0 0.0048 16.7 1.0 1.5 1 0 0 1 1 1 1 SurA N-terminal domain YABBY PF04690.13 ORF16807 - 0.043 14.4 0.8 7.7 7.1 0.0 2.4 2 1 0 2 2 2 0 YABBY protein Ank_2 PF12796.7 ORF7609 - 2.7e-12 47.1 0.9 0.00062 20.3 0.0 4.0 4 0 0 4 4 4 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF7609 - 1.5e-09 37.3 1.1 0.001 19.4 0.0 4.8 5 0 0 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF7609 - 4.3e-06 26.9 4.3 0.021 15.1 0.0 4.6 4 1 0 4 4 4 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF7609 - 6.3e-06 26.6 0.3 0.0076 16.8 0.0 3.6 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF7609 - 0.0034 17.8 0.1 0.66 10.5 0.0 3.2 3 0 0 3 3 3 1 Ankyrin repeat DUF615 PF04751.14 ORF7609 - 0.12 12.3 0.0 0.72 9.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF615) RuBisCO_large PF00016.20 ORF74155 - 3.3e-97 325.3 0.0 6.2e-97 324.4 0.0 1.4 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 ORF74155 - 5e-35 120.3 0.0 8.3e-35 119.6 0.0 1.3 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain PPR_2 PF13041.6 ORF64317 - 4.2e-35 119.7 0.0 4.3e-09 36.4 0.0 9.2 6 1 2 9 9 9 6 PPR repeat family PPR PF01535.20 ORF64317 - 1.4e-23 81.4 8.5 5.9e-05 23.0 0.0 10.5 12 0 0 12 12 12 6 PPR repeat PPR_3 PF13812.6 ORF64317 - 2.9e-17 62.5 0.0 0.015 15.4 0.0 6.8 5 2 5 10 10 10 6 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF64317 - 1.5e-14 53.3 0.2 0.0033 17.1 0.0 9.7 11 0 0 11 11 11 3 PPR repeat PPR_long PF17177.4 ORF64317 - 2.8e-06 26.9 0.6 0.014 14.8 0.0 3.9 2 1 2 4 4 4 2 Pentacotripeptide-repeat region of PRORP DiS_P_DiS PF06750.13 ORF64317 - 0.058 13.5 0.2 0.69 10.1 0.0 2.8 3 0 0 3 3 3 0 Bacterial Peptidase A24 N-terminal domain tRNA-synt_2 PF00152.20 ORF6354 - 4.4e-74 249.4 0.1 7.4e-74 248.6 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 ORF6354 - 5.6e-07 29.5 0.1 1.3e-06 28.3 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 ORF6354 - 0.0019 17.8 0.6 1 8.8 0.4 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Plavaka PF18759.1 ORF6354 - 0.063 12.5 0.1 0.098 11.9 0.1 1.2 1 0 0 1 1 1 0 Plavaka transposase Inhibitor_I71 PF12628.7 ORF6354 - 0.69 9.7 7.4 2.1 8.1 1.7 3.1 3 0 0 3 3 3 0 Falstatin, cysteine peptidase inhibitor NARP1 PF12569.8 ORF6354 - 1.3 7.9 8.2 2.3 7.0 8.2 1.3 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Glyco_hydro_3_C PF01915.22 ORF63427 - 1.3e-51 175.5 0.0 1.9e-51 175.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Glyco_hydro_3 PF00933.21 ORF63427 - 1.6e-33 116.5 0.0 3.6e-33 115.3 0.0 1.6 1 1 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Fn3-like PF14310.6 ORF63427 - 4.4e-16 58.7 0.1 1.4e-15 57.2 0.0 1.9 2 0 0 2 2 2 1 Fibronectin type III-like domain Pkinase PF00069.25 ORF49707 - 7.3e-42 143.5 0.0 1.1e-41 143.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49707 - 3.4e-32 111.7 0.0 4.9e-32 111.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF49707 - 0.00013 21.4 0.0 0.00024 20.5 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF49707 - 0.00036 19.4 0.0 0.00056 18.8 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF49707 - 0.049 13.0 0.0 0.091 12.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DNA_ligase_OB_2 PF14743.6 ORF49707 - 0.09 12.8 0.1 0.19 11.8 0.1 1.4 1 0 0 1 1 1 0 DNA ligase OB-like domain RuBisCO_large PF00016.20 ORF21481 - 3.3e-99 331.8 0.0 6.3e-99 330.9 0.0 1.4 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 ORF21481 - 5e-35 120.3 0.0 8.3e-35 119.6 0.0 1.3 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain Glyco_hydro_3_C PF01915.22 ORF14787 - 1.3e-51 175.5 0.0 1.9e-51 175.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Glyco_hydro_3 PF00933.21 ORF14787 - 1.6e-33 116.5 0.0 3.6e-33 115.3 0.0 1.6 1 1 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Fn3-like PF14310.6 ORF14787 - 4.4e-16 58.7 0.1 1.4e-15 57.2 0.0 1.9 2 0 0 2 2 2 1 Fibronectin type III-like domain PPR_2 PF13041.6 ORF102327 - 3.3e-57 190.5 6.7 6.4e-13 48.7 0.0 8.5 1 1 8 9 9 9 8 PPR repeat family PPR PF01535.20 ORF102327 - 1.6e-51 169.0 6.8 5.1e-07 29.5 0.0 9.6 9 0 0 9 9 9 9 PPR repeat PPR_3 PF13812.6 ORF102327 - 1.6e-46 156.2 0.8 2.3e-11 43.6 0.0 5.9 2 1 5 7 7 7 6 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF102327 - 6.7e-46 153.7 1.3 7.8e-09 35.1 0.0 9.4 9 0 0 9 9 9 8 PPR repeat PPR_long PF17177.4 ORF102327 - 4.6e-32 111.1 1.1 2e-18 66.5 0.2 3.6 1 1 2 3 3 3 3 Pentacotripeptide-repeat region of PRORP ATP13 PF12921.7 ORF102327 - 2.7e-05 24.0 0.0 0.61 10.0 0.0 4.4 4 1 1 5 5 5 2 Mitochondrial ATPase expression TPR_19 PF14559.6 ORF102327 - 0.0072 16.8 0.1 1.7 9.2 0.0 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat T4SS-DNA_transf PF02534.14 ORF102327 - 0.013 14.3 0.0 0.021 13.6 0.0 1.3 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer MRP-S27 PF10037.9 ORF102327 - 0.17 10.7 2.0 10 4.9 0.0 3.4 4 1 1 5 5 5 0 Mitochondrial 28S ribosomal protein S27 DUF4373 PF14297.6 ORF102327 - 0.21 12.4 0.1 0.67 10.8 0.1 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4373) DUF902 PF06001.13 NODE_4800_length_1750_cov_327.858892_g3440_i0forward_frame_1 - 0.015 15.8 8.4 11 6.6 0.2 4.5 3 0 0 3 3 3 0 Domain of Unknown Function (DUF902) EF-hand_1 PF00036.32 ORF68199 - 7.4e-22 75.2 2.1 0.00015 21.0 0.0 6.1 5 0 0 5 5 5 5 EF hand EF-hand_6 PF13405.6 ORF68199 - 1.6e-21 74.3 2.3 0.0001 21.9 0.0 6.4 6 0 0 6 6 6 4 EF-hand domain EF-hand_7 PF13499.6 ORF68199 - 1.5e-20 73.4 7.8 5.7e-06 26.7 0.0 5.2 3 1 2 5 5 5 5 EF-hand domain pair EF-hand_8 PF13833.6 ORF68199 - 3.3e-09 36.5 5.5 0.017 15.0 0.1 5.3 5 0 0 5 5 5 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF68199 - 2.4e-07 31.0 0.0 0.0045 17.3 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF68199 - 2e-06 27.0 3.4 0.29 10.7 0.0 5.3 5 0 0 5 5 5 2 EF hand EF-hand_4 PF12763.7 ORF68199 - 0.0002 21.3 1.3 0.016 15.1 0.0 3.4 2 1 2 4 4 4 1 Cytoskeletal-regulatory complex EF hand HIM1 PF08732.10 ORF68199 - 0.037 13.5 0.0 0.071 12.6 0.0 1.4 1 0 0 1 1 1 0 HIM1 FAM76 PF16046.5 ORF68199 - 1.5 8.1 6.4 0.14 11.5 0.3 2.1 2 0 0 2 2 2 0 FAM76 protein Cornifin PF02389.15 NODE_4800_length_1750_cov_327.858892_g3440_i0reverse_frame_3 - 4e-06 27.1 30.5 0.0041 17.3 3.2 4.0 1 1 3 4 4 4 4 Cornifin (SPRR) family CMAS PF02353.20 ORF91355 - 3.6e-58 197.0 0.0 8.9e-34 117.0 0.0 2.6 2 1 0 2 2 2 2 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 ORF91355 - 2.7e-12 46.9 0.0 4e-10 39.8 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF91355 - 2.9e-12 47.1 0.0 5.6e-11 43.0 0.0 2.8 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF91355 - 3.2e-12 46.9 0.0 1.5e-09 38.4 0.0 3.8 3 1 0 3 3 3 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF91355 - 8.2e-10 38.7 0.0 1.5e-09 37.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF91355 - 3.8e-08 34.0 0.0 5e-07 30.4 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF91355 - 0.00026 20.5 0.0 0.00072 19.1 0.0 1.7 1 0 0 1 1 1 1 Putative methyltransferase FtsJ PF01728.19 ORF91355 - 0.00077 19.6 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase DUF938 PF06080.12 ORF91355 - 0.002 18.0 0.0 0.0045 16.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF938) MTS PF05175.14 ORF91355 - 0.004 16.7 0.0 0.021 14.4 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain PCMT PF01135.19 ORF91355 - 0.013 15.3 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltr_RsmB-F PF01189.17 ORF91355 - 0.11 12.1 0.0 0.49 10.0 0.0 2.0 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F tRNA_U5-meth_tr PF05958.11 ORF91355 - 0.21 10.5 0.1 0.51 9.3 0.0 1.6 2 0 0 2 2 2 0 tRNA (Uracil-5-)-methyltransferase Ephrin_rec_like PF07699.13 ORF90961 - 1.4e-07 31.1 138.3 3.9e-07 29.7 5.6 14.1 9 6 5 14 14 14 9 Putative ephrin-receptor like Suf PF05843.14 ORF77097 - 1.2e-07 32.1 3.6 0.0015 18.6 0.2 3.4 2 1 1 3 3 3 2 Suppressor of forked protein (Suf) TPR_14 PF13428.6 ORF77097 - 0.0007 20.2 20.0 0.39 11.6 0.0 7.5 4 3 4 8 8 8 2 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 ORF77097 - 0.0013 18.7 4.9 2.7 8.0 0.1 4.1 4 1 0 5 5 5 2 Mad3/BUB1 homology region 1 Cas_Csy4 PF09618.10 ORF77097 - 0.07 13.3 0.1 0.16 12.1 0.1 1.5 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) TOM20_plant PF06552.12 ORF77097 - 0.071 12.9 0.4 0.33 10.7 0.2 2.2 2 0 0 2 2 2 0 Plant specific mitochondrial import receptor subunit TOM20 BET PF17035.5 ORF77097 - 0.49 10.6 4.2 16 5.8 1.2 2.6 2 0 0 2 2 2 0 Bromodomain extra-terminal - transcription regulation TPR_2 PF07719.17 ORF77097 - 0.51 10.6 10.6 9.3 6.6 0.0 5.9 6 0 0 6 6 6 0 Tetratricopeptide repeat PP2C PF00481.21 ORF54245 - 5.3e-37 127.9 0.0 9.6e-37 127.0 0.0 1.5 1 0 0 1 1 1 1 Protein phosphatase 2C Phage_TAC_8 PF10666.9 ORF54245 - 0.033 14.5 0.0 0.061 13.6 0.0 1.4 1 0 0 1 1 1 0 Phage tail assembly chaperone protein Gp14 ()A118 GLTP PF08718.11 ORF104974 - 3.2 8.0 5.3 0.44 10.8 0.7 2.0 2 0 0 2 2 2 0 Glycolipid transfer protein (GLTP) Ephrin_rec_like PF07699.13 ORF102232 - 1.4e-07 31.1 138.3 3.9e-07 29.7 5.6 14.1 9 6 5 14 14 14 9 Putative ephrin-receptor like ERM PF00769.19 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 3e-05 23.9 23.7 3e-05 23.9 23.7 3.1 3 0 0 3 3 3 1 Ezrin/radixin/moesin family GAS PF13851.6 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 0.00078 18.8 25.2 0.00078 18.8 25.2 3.5 2 1 1 3 3 3 2 Growth-arrest specific micro-tubule binding YjbH PF06082.11 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 0.47 9.2 9.5 0.65 8.7 9.5 1.3 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH KASH_CCD PF14662.6 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 2.6 7.8 57.8 0.76 9.6 19.5 4.3 3 1 1 4 4 4 0 Coiled-coil region of CCDC155 or KASH DUF5082 PF16888.5 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 2.9 8.2 39.2 4.8 7.5 16.8 4.4 4 0 0 4 4 4 0 Domain of unknown function (DUF5082) SpoOE-like PF09388.10 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 3.6 7.6 12.0 0.84 9.6 0.3 3.8 3 0 0 3 3 3 0 Spo0E like sporulation regulatory protein HALZ PF02183.18 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 4.9 7.4 35.6 0.22 11.8 2.4 6.3 6 1 1 7 7 7 0 Homeobox associated leucine zipper YabA PF06156.13 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 7.9 7.2 43.6 0.35 11.5 10.6 4.9 3 2 1 4 4 4 0 Initiation control protein YabA AMP-binding PF00501.28 ORF99274 - 7.7e-55 186.2 0.0 1e-54 185.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF99274 - 2.3e-07 31.7 0.1 7.5e-07 30.0 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 ORF99274 - 0.0038 16.1 0.0 0.047 12.6 0.0 2.1 2 0 0 2 2 2 1 GH3 auxin-responsive promoter TPR_1 PF00515.28 ORF93756 - 3.1e-30 102.7 11.7 6.2e-06 25.8 0.0 7.8 8 0 0 8 8 7 6 Tetratricopeptide repeat TPR_2 PF07719.17 ORF93756 - 7.5e-23 78.8 13.6 0.0045 17.0 0.0 7.6 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_8 PF13181.6 ORF93756 - 6.7e-19 66.5 6.3 0.016 15.4 0.2 7.5 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF93756 - 1.2e-17 63.3 10.6 9.9e-09 34.8 0.1 6.5 7 1 2 9 9 9 4 TPR repeat TPR_16 PF13432.6 ORF93756 - 2.8e-14 53.5 6.5 2.8e-07 31.1 0.1 4.9 5 0 0 5 5 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF93756 - 7e-14 51.9 12.3 0.034 14.4 0.2 6.5 3 3 2 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF93756 - 2.4e-12 47.2 8.3 0.0079 16.7 0.0 5.1 4 1 1 6 6 4 4 Tetratricopeptide repeat TPR_17 PF13431.6 ORF93756 - 5.7e-11 42.0 11.6 0.11 12.9 0.5 6.9 8 0 0 8 8 6 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF93756 - 1.1e-07 32.1 9.1 1.1 10.2 0.0 6.7 2 2 6 8 8 8 3 Tetratricopeptide repeat TPR_9 PF13371.6 ORF93756 - 6.4e-07 29.4 1.5 0.032 14.4 0.0 3.6 1 1 2 3 3 3 2 Tetratricopeptide repeat ChAPs PF09295.10 ORF93756 - 1.1e-06 28.0 0.6 0.0034 16.4 0.0 2.8 1 1 2 3 3 3 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_10 PF13374.6 ORF93756 - 4.5e-05 23.2 2.7 3 7.8 0.1 5.3 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_20 PF14561.6 ORF93756 - 0.00045 20.5 1.4 0.83 10.0 0.4 3.9 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF93756 - 0.00052 20.5 5.4 34 5.4 0.0 6.8 7 0 0 7 7 7 0 Tetratricopeptide repeat TOM20_plant PF06552.12 ORF93756 - 0.0012 18.6 0.7 0.0042 16.9 0.1 2.1 2 1 0 2 2 2 1 Plant specific mitochondrial import receptor subunit TOM20 TPR_7 PF13176.6 ORF93756 - 0.0021 18.0 8.7 14 6.0 0.0 6.1 8 0 0 8 8 6 0 Tetratricopeptide repeat TPR_21 PF09976.9 ORF93756 - 0.003 17.3 2.8 12 5.5 0.3 3.4 2 1 1 3 3 3 0 Tetratricopeptide repeat-like domain TPR_15 PF13429.6 ORF93756 - 0.0092 15.2 4.9 0.31 10.2 0.3 3.0 1 1 2 3 3 3 2 Tetratricopeptide repeat SRP_TPR_like PF17004.5 ORF93756 - 0.039 14.0 1.2 0.22 11.5 1.2 2.2 1 1 0 1 1 1 0 Putative TPR-like repeat ANAPC3 PF12895.7 ORF93756 - 0.16 12.2 16.5 4.2 7.7 1.5 4.2 2 1 2 4 4 4 0 Anaphase-promoting complex, cyclosome, subunit 3 PPTA PF01239.22 ORF93756 - 0.39 10.5 2.9 0.79 9.5 1.0 2.5 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat EST1_DNA_bind PF10373.9 ORF93756 - 0.65 9.4 3.1 5.7 6.3 0.1 2.7 2 1 0 2 2 2 0 Est1 DNA/RNA binding domain AMP-binding PF00501.28 ORF60214 - 7.7e-55 186.2 0.0 1e-54 185.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF60214 - 2.3e-07 31.7 0.1 7.5e-07 30.0 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 ORF60214 - 0.0038 16.1 0.0 0.047 12.6 0.0 2.1 2 0 0 2 2 2 1 GH3 auxin-responsive promoter Ion_trans PF00520.31 ORF50862 - 7.7e-05 22.0 9.6 0.00013 21.3 9.6 1.3 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 ORF50862 - 0.16 11.8 3.3 0.049 13.5 0.3 1.7 2 0 0 2 2 2 0 Ligand-gated ion channel Glyco_transf_15 PF01793.16 ORF42297 - 6.9e-08 32.1 0.0 8.6e-07 28.5 0.0 2.0 1 1 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase PAN_4 PF14295.6 ORF42297 - 0.0033 17.3 0.1 0.0087 16.0 0.1 1.7 1 0 0 1 1 1 1 PAN domain Pyridoxal_deC PF00282.19 ORF35360 - 8.8e-18 64.2 0.0 1.2e-17 63.7 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 ORF35360 - 3.5e-14 52.6 0.2 1.7e-13 50.3 0.1 2.0 1 1 1 2 2 2 1 Aminotransferase class-V HKR_ArcB_TM PF18415.1 ORF35360 - 0.03 15.1 0.5 0.079 13.8 0.5 1.7 1 0 0 1 1 1 0 Histidine kinase receptor ArcB trans-membrane domain DUF2935 PF11155.8 ORF35360 - 0.072 13.4 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) Nup188_C PF18378.1 ORF35360 - 0.085 11.7 0.0 0.14 10.9 0.0 1.2 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain Beta_elim_lyase PF01212.21 ORF35360 - 0.17 11.1 1.2 0.75 9.0 0.2 2.1 1 1 0 2 2 2 0 Beta-eliminating lyase RuBisCO_large PF00016.20 ORF31931 - 6.1e-98 327.7 0.0 1.2e-97 326.8 0.0 1.4 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 ORF31931 - 5e-35 120.3 0.0 8.2e-35 119.6 0.0 1.3 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain SAICAR_synt PF01259.18 ORF23063 - 0.011 15.4 0.1 0.019 14.6 0.1 1.3 1 0 0 1 1 1 0 SAICAR synthetase Sec61_beta PF03911.16 ORF23063 - 0.34 11.0 4.0 9 6.4 0.1 3.2 3 0 0 3 3 3 0 Sec61beta family DUF2431 PF10354.9 ORF15794 - 9.5e-21 74.8 0.0 1.6e-20 74.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Drc1-Sld2 PF11719.8 ORF15794 - 0.26 10.8 2.4 0.39 10.2 2.4 1.2 1 0 0 1 1 1 0 DNA replication and checkpoint protein DUF2431 PF10354.9 ORF11552 - 9.5e-21 74.8 0.0 1.6e-20 74.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Drc1-Sld2 PF11719.8 ORF11552 - 0.26 10.8 2.4 0.39 10.2 2.4 1.2 1 0 0 1 1 1 0 DNA replication and checkpoint protein AMP-binding PF00501.28 ORF11371 - 7.7e-55 186.2 0.0 1e-54 185.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF11371 - 2.3e-07 31.7 0.1 7.5e-07 30.0 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 ORF11371 - 0.0038 16.1 0.0 0.047 12.6 0.0 2.1 2 0 0 2 2 2 1 GH3 auxin-responsive promoter Anoctamin PF04547.12 ORF9241 - 2.1e-53 181.8 18.5 2.6e-53 181.5 18.5 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel G_glu_transpept PF01019.21 ORF33872 - 2.5e-192 640.2 0.7 2.8e-192 640.0 0.7 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase VBS PF08913.10 ORF33872 - 0.092 13.2 0.4 1.1 9.8 0.0 2.3 2 0 0 2 2 2 0 Vinculin Binding Site CarboxypepD_reg PF13620.6 ORF105636 - 3.3e-06 27.3 1.1 0.018 15.3 0.1 3.4 3 0 0 3 3 3 2 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 ORF105636 - 0.00024 21.0 0.0 0.47 10.5 0.0 2.9 3 0 0 3 3 3 2 CarboxypepD_reg-like domain CooC_C PF15976.5 ORF105636 - 0.0046 17.0 0.0 2 8.5 0.0 2.6 2 0 0 2 2 2 2 CS1-pili formation C-terminal Dioxygenase_C PF00775.21 ORF105636 - 0.0081 15.6 0.0 0.48 9.8 0.0 2.6 2 0 0 2 2 2 1 Dioxygenase Big_1 PF02369.16 ORF105636 - 0.074 13.1 0.0 20 5.3 0.0 3.1 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 1) DUF3285 PF11688.8 NODE_4914_length_1738_cov_11456.709336_g3528_i0reverse_frame_3 - 0.067 13.1 0.2 0.16 11.9 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3285) SIT PF15330.6 ORF51224 - 0.01 16.3 0.4 2.9 8.4 0.0 3.2 3 0 0 3 3 3 1 SHP2-interacting transmembrane adaptor protein, SIT PDDEXK_9 PF08011.11 ORF51224 - 0.042 13.8 0.9 0.21 11.5 0.9 2.3 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily TMEM154 PF15102.6 ORF51224 - 0.064 13.2 0.0 0.21 11.5 0.0 1.9 2 0 0 2 2 2 0 TMEM154 protein family SIT PF15330.6 ORF23588 - 0.01 16.3 0.4 2.9 8.4 0.0 3.2 3 0 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT PDDEXK_9 PF08011.11 ORF23588 - 0.042 13.8 0.9 0.21 11.5 0.9 2.3 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily TMEM154 PF15102.6 ORF23588 - 0.064 13.2 0.0 0.21 11.5 0.0 1.9 2 0 0 2 2 2 0 TMEM154 protein family Ion_trans PF00520.31 ORF14644 - 0.99 8.6 17.3 8.5 5.5 17.5 2.5 1 1 0 1 1 1 0 Ion transport protein Ras PF00071.22 ORF90615 - 3.9e-07 29.8 2.1 7.2e-07 28.9 0.0 2.1 2 0 0 2 2 2 1 Ras family WD40 PF00400.32 ORF90615 - 5e-05 24.0 0.1 0.73 10.8 0.0 2.6 2 0 0 2 2 2 2 WD domain, G-beta repeat Roc PF08477.13 ORF90615 - 0.00041 20.6 0.0 0.0017 18.6 0.0 2.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF90615 - 0.0027 17.8 1.2 0.008 16.3 0.0 2.4 2 1 0 2 2 2 1 50S ribosome-binding GTPase HOOK PF05622.12 ORF90615 - 0.0033 15.6 27.2 0.0052 15.0 27.2 1.2 1 0 0 1 1 1 1 HOOK protein Tropomyosin_1 PF12718.7 ORF90615 - 0.0037 17.4 18.3 0.0037 17.4 18.3 2.6 1 1 1 2 2 2 1 Tropomyosin like Dynamin_N PF00350.23 ORF90615 - 0.0071 16.4 9.4 0.03 14.4 0.0 3.6 3 1 0 3 3 3 1 Dynamin family Zeta_toxin PF06414.12 ORF90615 - 0.029 13.7 0.1 0.029 13.7 0.1 2.4 2 0 0 2 2 2 0 Zeta toxin AAA_28 PF13521.6 ORF90615 - 0.034 14.4 2.0 0.09 13.0 0.0 2.6 2 1 1 3 3 3 0 AAA domain AAA_29 PF13555.6 ORF90615 - 0.1 12.4 0.0 0.52 10.1 0.0 2.1 2 0 0 2 2 2 0 P-loop containing region of AAA domain Sen15 PF09631.10 ORF90615 - 0.13 12.6 2.0 0.25 11.6 0.0 2.4 2 1 0 2 2 2 0 Sen15 protein AAA_15 PF13175.6 ORF90615 - 0.16 11.7 9.9 3.1 7.4 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain Fez1 PF06818.15 ORF90615 - 0.33 11.4 30.9 2.8 8.4 16.4 2.3 1 1 1 2 2 2 0 Fez1 EzrA PF06160.12 ORF90615 - 0.33 9.1 24.3 0.26 9.4 21.8 1.7 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA ATG16 PF08614.11 ORF90615 - 0.38 11.0 36.2 0.76 10.0 36.2 1.5 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) TPR_MLP1_2 PF07926.12 ORF90615 - 0.68 10.0 37.7 2.1 8.4 18.2 2.5 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein ABC_tran PF00005.27 ORF90615 - 1 9.9 0.0 1 9.9 0.0 2.8 2 1 0 2 2 1 0 ABC transporter DUF4200 PF13863.6 ORF90615 - 1 9.8 36.4 13 6.3 31.4 3.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) KASH_CCD PF14662.6 ORF90615 - 1.1 9.0 34.5 2.2 8.0 34.5 1.5 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DUF1664 PF07889.12 ORF90615 - 2.1 8.4 17.6 0.43 10.6 11.6 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) V_ATPase_I PF01496.19 ORF90615 - 2.3 6.0 14.6 3.3 5.5 14.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Tektin PF03148.14 ORF90615 - 3.6 6.2 27.6 2.2 7.0 9.3 2.2 1 1 1 2 2 2 0 Tektin family FlaC_arch PF05377.11 ORF90615 - 4.8 7.7 17.6 0.12 12.8 0.7 3.7 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) DMPK_coil PF08826.10 ORF90615 - 5.8 7.1 28.5 0.49 10.5 7.5 3.5 2 1 1 3 3 3 0 DMPK coiled coil domain like DHC_N1 PF08385.12 ORF60318 - 6.5e-56 190.1 16.7 6.5e-56 190.1 16.7 2.0 1 1 1 2 2 2 1 Dynein heavy chain, N-terminal region 1 NAD_binding_5 PF07994.12 ORF60318 - 5.5 6.3 7.1 0.47 9.8 2.1 1.8 2 0 0 2 2 2 0 Myo-inositol-1-phosphate synthase AceK PF06315.11 ORF35211 - 3.8e-245 814.7 0.0 4.4e-245 814.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate dehydrogenase kinase/phosphatase (AceK) DUF2840 PF11000.8 ORF35211 - 0.18 11.6 0.7 1.3 8.8 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2840) Ion_trans PF00520.31 ORF1513 - 3.4e-29 101.8 29.0 5.5e-20 71.6 12.5 2.1 2 0 0 2 2 2 2 Ion transport protein Ribosomal_L1 PF00687.21 ORF1513 - 0.13 12.0 0.2 0.21 11.3 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L1p/L10e family Popeye PF04831.13 ORF1513 - 7.4 6.7 7.3 21 5.3 1.2 3.2 3 1 0 3 3 3 0 Popeye protein conserved region bZIP_1 PF00170.21 ORF100847 - 7e-07 29.2 12.6 7e-07 29.2 12.6 3.1 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF100847 - 2.5e-06 27.5 13.4 2.5e-06 27.5 13.4 2.8 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF100847 - 0.076 12.8 1.1 0.16 11.7 1.1 1.5 1 0 0 1 1 1 0 Peptidase M76 family SecD-TM1 PF13721.6 ORF100847 - 8.7 6.9 6.1 1.7 9.2 0.9 2.4 2 0 0 2 2 2 0 SecD export protein N-terminal TM region Glyco_hydro_31 PF01055.26 NODE_4982_length_1730_cov_89.589381_g3585_i1forward_frame_1 - 2.6e-50 171.9 6.8 3.9e-50 171.3 6.8 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 NtCtMGAM_N PF16863.5 NODE_4982_length_1730_cov_89.589381_g3585_i1forward_frame_1 - 4.8e-06 26.7 0.1 2e-05 24.7 0.1 2.0 2 0 0 2 2 2 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase Gal_mutarotas_2 PF13802.6 NODE_4982_length_1730_cov_89.589381_g3585_i1forward_frame_1 - 2.2e-05 24.7 0.1 5.9e-05 23.3 0.1 1.7 1 0 0 1 1 1 1 Galactose mutarotase-like AAA_8 PF12780.7 NODE_4949_length_1734_cov_230.549147_g3557_i0reverse_frame_3 - 7.9e-98 326.9 0.0 1.3e-97 326.2 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_lid_1 PF17857.1 NODE_4949_length_1734_cov_230.549147_g3557_i0reverse_frame_3 - 6.2e-19 68.1 0.7 3.2e-18 65.8 0.0 2.6 3 0 0 3 3 3 1 AAA+ lid domain AAA_7 PF12775.7 NODE_4949_length_1734_cov_230.549147_g3557_i0reverse_frame_3 - 5.7e-06 26.0 0.2 0.00052 19.6 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_7 PF17867.1 NODE_4949_length_1734_cov_230.549147_g3557_i0reverse_frame_3 - 6.1e-05 23.2 0.1 0.00025 21.2 0.1 2.1 2 0 0 2 2 2 1 Midasin AAA lid domain ABC_tran PF00005.27 NODE_4949_length_1734_cov_230.549147_g3557_i0reverse_frame_3 - 2.6 8.6 4.9 0.62 10.6 0.5 2.3 3 1 0 3 3 3 0 ABC transporter # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks9.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks9.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks9.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_standardCode_ORF.6frame.chunks9.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 19:19:45 2019 # [ok]